FN2646-S.SNP.1:2770 chr01:000002770 0 W/2770-2770 FN2646-S SNP G -> T AC=2;AN=200;BQB=0.890325;DP=5354;DP4=2128,2808,23,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08898e-25;MQSB=0.983001;RPB=0.84311;SGB=-47.5553;VDB=0.883389;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.1:3769 chr01:000003769 0 W/3769-3769 FN971-S Single Base Substitution G-C INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN793-S.SNP.1:11205 chr01:000011205 0 W/11205-11205 FN793-S Single Base Substitution T-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN793-S.SNP.1:11206 chr01:000011206 0 W/11206-11206 FN793-S Single Base Substitution C-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2451.SNP.1:11601 chr01:000011601 0 W/11601-11601 FN2451 SNP G -> A AC=1;AN=200;BQB=0.892168;DP=4224;DP4=2240,1656,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06031e-14;MQSB=0.0350965;RPB=0.90265;SGB=123.342;VDB=0.494957;EFF=UTR_5_PRIME(MODIFIER||197||142|LOC_Os01g01019|protein_coding|CODING|LOC_Os01g01019.1|1|1) FN-198.SNP.1:11764 chr01:000011764 0 W/11764-11764 FN-198 Single Base Substitution T-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2546-S.SNP.1:13365 chr01:000013365 0 W/13365-13365 FN2546-S SNP G -> A AC=2;AN=198;BQB=0.560295;DP=3735;DP4=1707,1679,10,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.89149e-12;MQSB=0.980249;RPB=0.622829;SGB=90.9049;VDB=0.128739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V198M|593|LOC_Os01g01030|protein_coding|CODING|LOC_Os01g01030.1|1|1) FN1536-S.SNP.1:23873 chr01:000023873 0 W/23873-23873 FN1536-S Single Base Substitution T-A INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN702-S.SNP.1:28075 chr01:000028075 0 W/28075-28075 FN702-S Single Base Substitution G-C INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2216-S.SNP.1:34609 chr01:000034609 0 W/34609-34609 FN2216-S SNP C -> T AC=1;AN=190;BQB=0.186069;DP=5614;DP4=2336,2813,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.10114e-05;MQSB=3.01816e-07;RPB=0.516357;SGB=-38.5551;VDB=0.46684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.1:43306 chr01:000043306 0 W/43306-43306 FN1264-S Single Base Substitution A-G INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN4038-S.SNP.1:45884 chr01:000045884 0 W/45884-45884 FN4038-S SNP C -> T AC=2;AN=168;BQB=0.608943;DP=3124;DP4=1470,1522,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.55486e-17;MQSB=0.999289;RPB=0.990168;SGB=113.657;VDB=0.590295;EFF=INTRON(MODIFIER||||802|LOC_Os01g01090|protein_coding|CODING|LOC_Os01g01090.1|3|1) FN910-S.SNP.1:51007 chr01:000051007 0 W/51007-51007 FN910-S Single Base Substitution G-A INTRON HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3356-S.SNP.1:52055 chr01:000052055 0 W/52055-52055 FN3356-S SNP C -> A AC=1;AN=184;BQB=0.253086;DP=4853;DP4=2291,2424,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0776839;MQB=0.693143;MQSB=5.79233e-10;RPB=0.99103;SGB=43.4494;VDB=0.948028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A276S|1338|LOC_Os01g01100|protein_coding|CODING|LOC_Os01g01100.1|3|1) FN1103-S.SNP.1:52129 chr01:000052129 0 W/52129-52129 FN1103-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g01100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2558-S.SNP.1:54708 chr01:000054708 0 W/54708-54708 FN2558-S SNP A -> G AC=2;AN=198;BQB=0.810095;DP=4417;DP4=2028,2078,31,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.44117e-35;MQSB=0.925138;RPB=0.667069;SGB=279.305;VDB=0.96535;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.1:68334 chr01:000068334 0 W/68334-68334 FN807-S Single Base Substitution G-T INTERGENIC HOMO SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3940-S.SNP.1:71758 chr01:000071758 0 W/71758-71758 FN3940-S SNP G -> C AC=1;AN=158;BQB=0.991154;DP=2818;DP4=1398,1296,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.0141e-06;MQSB=0.998706;RPB=0.391665;SGB=47.0672;VDB=0.116142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.1:73189 chr01:000073189 0 W/73189-73189 FN1186-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g01150 RNA recognition motif, putative, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN833-S.SNP.1:75760 chr01:000075760 0 W/75760-75760 FN833-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3912-S.SNP.1:77712 chr01:000077712 0 W/77712-77712 FN3912-S SNP G -> A AC=2;AN=158;BQB=0.886487;DP=2396;DP4=1152,1132,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.44994e-15;MQSB=0.878428;RPB=0.121175;SGB=74.5068;VDB=0.735191;EFF=UTR_3_PRIME(MODIFIER||704||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.3|4|1),UTR_3_PRIME(MODIFIER||704||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.2|4|1) FN3912-S.SNP.1:77722 chr01:000077722 0 W/77722-77722 FN3912-S SNP T -> A AC=2;AN=158;BQB=0.805929;DP=2414;DP4=1136,1172,9,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.58504e-12;MQSB=0.825118;RPB=0.520226;SGB=77.6532;VDB=0.379812;EFF=UTR_3_PRIME(MODIFIER||714||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.3|4|1),UTR_3_PRIME(MODIFIER||714||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.2|4|1) FN3912-S.SNP.1:77723 chr01:000077723 0 W/77723-77723 FN3912-S SNP C -> A AC=2;AN=158;BQB=0.798282;DP=2415;DP4=1155,1143,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.59021e-13;MQSB=0.826273;RPB=0.598844;SGB=82.0227;VDB=0.425957;EFF=UTR_3_PRIME(MODIFIER||715||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.3|4|1),UTR_3_PRIME(MODIFIER||715||978|LOC_Os01g01150|protein_coding|CODING|LOC_Os01g01150.2|4|1) FN2674-S.SNP.1:98467 chr01:000098467 0 W/98467-98467 FN2674-S SNP C -> T AC=2;AN=200;BQB=0.0979589;DP=4961;DP4=2387,2269,25,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.65221e-29;MQSB=0.551035;RPB=0.405331;SGB=173.661;VDB=0.911537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T761I|790|LOC_Os01g01200|protein_coding|CODING|LOC_Os01g01200.1|7|1) FN765-S.SNP.1:99644 chr01:000099644 0 W/99644-99644 FN765-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g01210 retrotransposon protein, putative, unclassified SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3528-S.SNP.1:99719 chr01:000099719 0 W/99719-99719 FN3528-S SNP T -> A AC=1;AN=188;BQB=0.997591;DP=2988;DP4=1418,1484,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.90861e-12;MQSB=0.706326;RPB=0.990323;SGB=57.244;VDB=0.852316;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R31W|212|LOC_Os01g01210|protein_coding|CODING|LOC_Os01g01210.1|2|1) FN3528-S.SNP.1:99720 chr01:000099720 0 W/99720-99720 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.96804;DP=2992;DP4=1434,1499,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.75675e-11;MQSB=0.65697;RPB=0.951171;SGB=71.6954;VDB=0.81961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E30D|212|LOC_Os01g01210|protein_coding|CODING|LOC_Os01g01210.1|2|1) FN964-S.SNP.1:103733 chr01:000103733 0 W/103733-103733 FN964-S Single Base Substitution C-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1065-S.SNP.1:103919 chr01:000103919 0 W/103919-103919 FN1065-S Single Base Substitution C-T INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2611-S.SNP.1:104077 chr01:000104077 0 W/104077-104077 FN2611-S SNP G -> C AC=1;AN=200;BQB=0.697992;DP=4681;DP4=2189,2239,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74369e-16;MQSB=0.074945;RPB=0.625263;SGB=94.3471;VDB=0.107726;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.1:104078 chr01:000104078 0 W/104078-104078 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.886718;DP=4679;DP4=2158,2178,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01327e-15;MQSB=0.103036;RPB=0.869937;SGB=30.3571;VDB=0.0642805;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.1:104291 chr01:000104291 0 W/104291-104291 FN830-S Single Base Substitution T-C INTERGENIC HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2620-S.SNP.1:118246 chr01:000118246 0 W/118246-118246 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.576376;DP=3646;DP4=1430,2041,8,16;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.00356555;MQB=0.0708456;MQSB=0.00343421;RPB=0.497;SGB=104.69;VDB=0.284043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L56I|832|LOC_Os01g01250|protein_coding|CODING|LOC_Os01g01250.1|1|1) FN2455.SNP.1:126522 chr01:000126522 0 W/126522-126522 FN2455 SNP G -> T AC=1;AN=200;BQB=0.743423;DP=4839;DP4=2361,2246,8,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0299649;MQB=0.145434;MQSB=4.85406e-08;RPB=0.991917;SGB=68.0801;VDB=0.402501;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G312|2027|LOC_Os01g01260|protein_coding|CODING|LOC_Os01g01260.1|1|1) FN484-S.SNP.1:133442 chr01:000133442 0 W/133442-133442 FN484-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g01270 retrotransposon protein, putative, unclassified, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN1596-S.SNP.1:141441 chr01:000141441 0 W/141441-141441 FN1596-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. W443-5-1-3.SNP.1:155243 chr01:000155243 0 W/155243-155243 W443-5-1-3 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN472-S.SNP.1:163335 chr01:000163335 0 W/163335-163335 FN472-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-298.SNP.1:165465 chr01:000165465 0 W/165465-165465 FN-298 Single Base Substitution T-C INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1483-S.SNP.1:167575 chr01:000167575 0 W/167575-167575 FN1483-S Single Base Substitution C-A INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1483-S.SNP.1:167576 chr01:000167576 0 W/167576-167576 FN1483-S Single Base Substitution C-A INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN-377.SNP.1:169131 chr01:000169131 0 W/169131-169131 FN-377 Single Base Substitution C-T UTR_3_PRIME HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN_846-8-1.SNP.1:172866 chr01:000172866 0 W/172866-172866 FN_846-8-1 Single Base Substitution A-T HET LOC_Os01g01350 SNF7 domain containing protein, putative, expressed SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN1679-S.SNP.1:174845 chr01:000174845 0 W/174845-174845 FN1679-S SNP G -> A AC=1;AN=188;BQB=0.178942;DP=3126;DP4=1718,1368,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0128472;MQSB=0.301809;RPB=0.106018;SGB=20.9711;VDB=0.901817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.1:176284 chr01:000176284 0 W/176284-176284 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.848429;DP=5033;DP4=2495,2092,19,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.49783e-12;MQSB=1.0182e-07;RPB=0.381737;SGB=87.1368;VDB=0.627806;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.1:182278 chr01:000182278 0 W/182278-182278 W463-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1430-S.SNP.1:182401 chr01:000182401 0 W/182401-182401 FN1430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2788-S.SNP.1:182686 chr01:000182686 0 W/182686-182686 FN2788-S SNP G -> T AC=2;AN=198;BQB=0.977631;DP=3556;DP4=2152,1102,28,4;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000281215;MQB=4.77026e-15;MQSB=0.00797751;RPB=0.307848;SGB=31.6811;VDB=0.26088;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.1:184141 chr01:000184141 0 W/184141-184141 W466-5-1 Single Base Substitution G-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. W247-2-1.SNP.1:187430 chr01:000187430 0 W/187430-187430 W247-2-1 Single Base Substitution A-T INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3517-S.SNP.1:191940 chr01:000191940 0 W/191940-191940 FN3517-S SNP G -> C AC=2;AN=188;BQB=0.879035;DP=2726;DP4=1266,1339,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.39947e-11;MQSB=0.940509;RPB=0.951595;SGB=41.3359;VDB=0.846183;EFF=INTRON(MODIFIER||||521|LOC_Os01g01380|protein_coding|CODING|LOC_Os01g01380.1|2|1) FN2631-S.SNP.1:209766 chr01:000209766 0 W/209766-209766 FN2631-S SNP A -> T AC=2;AN=200;BQB=0.991048;DP=3963;DP4=1971,1685,28,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000252334;MQB=2.38515e-23;MQSB=0.532134;RPB=0.996891;SGB=-47.9501;VDB=0.1267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.1:215067 chr01:000215067 0 W/215067-215067 FN3056-S SNP G -> A AC=1;AN=184;BQB=0.943967;DP=2995;DP4=1421,1472,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.69241e-10;MQSB=0.947765;RPB=0.87148;SGB=80.3949;VDB=0.821511;EFF=INTERGENIC(MODIFIER||||||||||1) FN4146-S.SNP.1:215482 chr01:000215482 0 W/215482-215482 FN4146-S SNP G -> A AC=2;AN=170;BQB=0.991574;DP=2421;DP4=1062,1143,21,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.88379e-19;MQSB=0.926316;RPB=0.719854;SGB=154.496;VDB=0.660474;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.1:219665 chr01:000219665 0 W/219665-219665 FN-294 Single Base Substitution C-T INTRON HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN2430.SNP.1:225777 chr01:000225777 0 W/225777-225777 FN2430 SNP A -> T AC=1;AN=200;BQB=0.125084;DP=5201;DP4=2606,2245,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13271e-18;MQSB=0.996691;RPB=0.664041;SGB=60.747;VDB=0.0794146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.1:230919 chr01:000230919 0 W/230919-230919 FN3467-S SNP T -> C AC=2;AN=184;BQB=0.868215;DP=2638;DP4=1210,1309,22,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.99877e-18;MQSB=0.548556;RPB=0.978118;SGB=157.265;VDB=0.943617;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.1:232064 chr01:000232064 0 W/232064-232064 FN774-S Single Base Substitution C-G INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN774-S.SNP.1:232072 chr01:000232072 0 W/232072-232072 FN774-S Single Base Substitution T-C INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1715-S.SNP.1:233467 chr01:000233467 0 W/233467-233467 FN1715-S SNP C -> T AC=1;AN=188;BQB=0.428567;DP=3438;DP4=1234,2165,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3766e-07;MQSB=0.934024;RPB=0.82689;SGB=5.5382;VDB=0.761518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.1:237593 chr01:000237593 0 W/237593-237593 FN2410 SNP G -> A AC=1;AN=200;BQB=0.167967;DP=3126;DP4=1614,1211,10,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000900101;MQSB=1.43023e-09;RPB=0.457328;SGB=58.8698;VDB=0.239607;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.1:241341 chr01:000241341 0 W/241341-241341 FN924-S Single Base Substitution C-T INTERGENIC HOMO SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN893-S.SNP.1:248081 chr01:000248081 0 W/248081-248081 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3064-S.SNP.1:249474 chr01:000249474 0 W/249474-249474 FN3064-S SNP A -> G AC=2;AN=184;BQB=0.882111;DP=2414;DP4=1124,1174,17,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.66847e-14;MQSB=0.972401;RPB=0.992182;SGB=22.0202;VDB=0.810596;EFF=SPLICE_SITE_REGION(LOW||||512|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.1|9|1),SPLICE_SITE_REGION(LOW||||511|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.2|9|1),SPLICE_SITE_REGION(LOW||||383|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.4|8|1),SPLICE_SITE_REGION(LOW||||363|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.5|8|1),INTRON(MODIFIER||||512|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.1|9|1),INTRON(MODIFIER||||511|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.2|9|1),INTRON(MODIFIER||||383|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.4|8|1),INTRON(MODIFIER||||363|LOC_Os01g01484|protein_coding|CODING|LOC_Os01g01484.5|8|1) FN4041-S.SNP.1:257789 chr01:000257789 0 W/257789-257789 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.964198;DP=2714;DP4=1464,1148,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.78021e-06;MQSB=0.994736;RPB=0.45455;SGB=21.0249;VDB=0.118298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.1:271762 chr01:000271762 0 W/271762-271762 FN1763-S SNP G -> A AC=1;AN=188;BQB=0.443913;DP=3528;DP4=2119,1371,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.12093e-11;MQSB=0.916508;RPB=0.809275;SGB=64.3306;VDB=0.49039;EFF=INTRON(MODIFIER||||468|LOC_Os01g01520|protein_coding|CODING|LOC_Os01g01520.1|1|1) FN2114-S.SNP.1:273850 chr01:000273850 0 W/273850-273850 FN2114-S SNP A -> T AC=2;AN=168;BQB=0.46606;DP=3788;DP4=1698,2022,16,24;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000791975;MQB=2.05416e-06;MQSB=0.873746;RPB=0.0273276;SGB=-94.7442;VDB=0.522487;EFF=INTRON(MODIFIER||||468|LOC_Os01g01520|protein_coding|CODING|LOC_Os01g01520.1|1|1) FN961-S.SNP.1:275870 chr01:000275870 0 W/275870-275870 FN961-S Single Base Substitution T-C INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN917-S.SNP.1:288823 chr01:000288823 0 W/288823-288823 FN917-S Single Base Substitution G-A INTRON HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN968-S.SNP.1:290836 chr01:000290836 0 W/290836-290836 FN968-S Single Base Substitution T-G INTRON HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN1120-S.SNP.1:299261 chr01:000299261 0 W/299261-299261 FN1120-S Single Base Substitution C-A INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1506-S.SNP.1:301642 chr01:000301642 0 W/301642-301642 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3540-S.SNP.1:313757 chr01:000313757 0 W/313757-313757 FN3540-S SNP C -> T AC=1;AN=188;BQB=0.999354;DP=3047;DP4=1692,1211,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.124713;MQB=0.936334;MQSB=7.11259e-09;RPB=0.936387;SGB=62.6088;VDB=0.637244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-67.SNP.1:316779 chr01:000316779 0 W/316779-316779 FN-67 Single Base Substitution A-G INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN828-S.SNP.1:317625 chr01:000317625 0 W/317625-317625 FN828-S Single Base Substitution G-C INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN1463-S.SNP.1:319576 chr01:000319576 0 W/319576-319576 FN1463-S Single Base Substitution A-G INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1355-S.SNP.1:330104 chr01:000330104 0 W/330104-330104 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-140.SNP.1:330645 chr01:000330645 0 W/330645-330645 FN-140 Single Base Substitution C-T INTRON HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2362.SNP.1:333355 chr01:000333355 0 W/333355-333355 FN2362 SNP G -> A AC=1;AN=192;BQB=0.977079;DP=4351;DP4=2243,1801,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.84479e-07;MQSB=0.00526261;RPB=0.878303;SGB=53.7748;VDB=0.122831;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V94|292|LOC_Os01g01680|protein_coding|CODING|LOC_Os01g01680.1|1|1) FN1477-S.SNP.1:334586 chr01:000334586 0 W/334586-334586 FN1477-S Single Base Substitution G-C INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN3667-S.SNP.1:338490 chr01:000338490 0 W/338490-338490 FN3667-S SNP A -> G AC=2;AN=190;BQB=0.344483;DP=2950;DP4=1345,1477,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.92162e-10;MQSB=0.987319;RPB=0.853377;SGB=22.7576;VDB=0.425455;EFF=INTRON(MODIFIER||||2911|LOC_Os01g01689|protein_coding|CODING|LOC_Os01g01689.1|7|1),INTRON(MODIFIER||||2828|LOC_Os01g01689|protein_coding|CODING|LOC_Os01g01689.3|7|1) FN805-S.SNP.1:339149 chr01:000339149 0 W/339149-339149 FN805-S Single Base Substitution T-C INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1615-S.SNP.1:351426 chr01:000351426 0 W/351426-351426 FN1615-S Single Base Substitution T-G INTRON HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2768-S.SNP.1:353935 chr01:000353935 0 W/353935-353935 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.952116;DP=4184;DP4=1991,1977,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47434e-11;MQSB=0.969342;RPB=0.675213;SGB=61.7198;VDB=0.8326;EFF=INTRON(MODIFIER||||2911|LOC_Os01g01689|protein_coding|CODING|LOC_Os01g01689.1|33|1),INTRON(MODIFIER||||2828|LOC_Os01g01689|protein_coding|CODING|LOC_Os01g01689.3|33|1) FN-83.SNP.1:367998 chr01:000367998 0 W/367998-367998 FN-83 Single Base Substitution G-A INTRON HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN553-S.SNP.1:369768 chr01:000369768 0 W/369768-369768 FN553-S Single Base Substitution A-T INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1131-S.SNP.1:379461 chr01:000379461 0 W/379461-379461 FN1131-S Single Base Substitution G-A INTRON HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1254-S.SNP.1:381309 chr01:000381309 0 W/381309-381309 FN1254-S Single Base Substitution G-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN718-S.SNP.1:384086 chr01:000384086 0 W/384086-384086 FN718-S Single Base Substitution T-A INTRON HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN718-S.SNP.1:384087 chr01:000384087 0 W/384087-384087 FN718-S Single Base Substitution G-T INTRON HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2113-S.SNP.1:387730 chr01:000387730 0 W/387730-387730 FN2113-S SNP T -> C AC=1;AN=168;BQB=0.468243;DP=3381;DP4=1918,1431,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.81688e-06;MQSB=0.98933;RPB=0.437248;SGB=-17.5266;VDB=0.80896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.1:388533 chr01:000388533 0 W/388533-388533 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.274641;DP=3718;DP4=1858,1813,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.2554e-11;MQSB=0.829606;RPB=0.849821;SGB=-103.201;VDB=0.306251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.1:391414 chr01:000391414 0 W/391414-391414 FN3663-S SNP G -> A AC=1;AN=190;BQB=0.410658;DP=3023;DP4=1313,1510,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13216e-05;MQSB=0.96589;RPB=0.648902;SGB=-17.0991;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.1:391446 chr01:000391446 0 W/391446-391446 FN916-S Single Base Substitution A-T INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2351.SNP.1:391489 chr01:000391489 0 W/391489-391489 FN2351 SNP C -> A AC=1;AN=192;BQB=0.852467;DP=5153;DP4=2684,2177,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.52071e-14;MQSB=0.0869435;RPB=0.277298;SGB=51.9931;VDB=0.769947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.1:393477 chr01:000393477 0 W/393477-393477 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.679583;DP=2749;DP4=1462,1181,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000208295;MQSB=0.85838;RPB=0.814682;SGB=30.6558;VDB=0.700218;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D201|376|LOC_Os01g01740|protein_coding|CODING|LOC_Os01g01740.1|2|1) FN2136-S.SNP.1:398691 chr01:000398691 0 W/398691-398691 FN2136-S SNP T -> A AC=2;AN=168;BQB=0.278314;DP=2709;DP4=1749,898,35,16;HOB=0.0235261;ICB=0.494119;MQ=29;MQ0F=0.218162;MQB=0.0186559;MQSB=1.62562e-08;RPB=0.963888;SGB=125.433;VDB=0.0873814;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.1:403521 chr01:000403521 0 W/403521-403521 W472-5-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3880-S.SNP.1:407446 chr01:000407446 0 W/407446-407446 FN3880-S SNP T -> G AC=1;AN=158;BQB=0.727624;DP=2467;DP4=1163,1177,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.5137e-06;MQSB=0.993218;RPB=0.423409;SGB=20.5959;VDB=0.146504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.1:411410 chr01:000411410 0 W/411410-411410 FN3311-S SNP T -> C AC=1;AN=184;BQB=0.588007;DP=2476;DP4=1042,1352,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38923e-08;MQSB=0.998469;RPB=0.999784;SGB=28.3187;VDB=0.713206;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.1:414504 chr01:000414504 0 W/414504-414504 FN-226 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g01780 exostosin family protein, putative, expressed SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2433.SNP.1:417840 chr01:000417840 0 W/417840-417840 FN2433 SNP C -> T AC=1;AN=200;BQB=0.87348;DP=5093;DP4=2456,2430,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00433e-08;MQSB=0.979418;RPB=0.598733;SGB=43.8747;VDB=0.639928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R542H|627|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R542H|596|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.2|9|1) FN2496.SNP.1:418332 chr01:000418332 0 W/418332-418332 FN2496 SNP A -> C AC=2;AN=200;BQB=0.890605;DP=4954;DP4=2350,2332,28,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.68955e-31;MQSB=0.727394;RPB=0.809002;SGB=64.0657;VDB=0.251786;EFF=INTRON(MODIFIER||||627|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.1|6|1),INTRON(MODIFIER||||596|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.2|6|1) FN1008-S.SNP.1:418585 chr01:000418585 0 W/418585-418585 FN1008-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2426.SNP.1:420151 chr01:000420151 0 W/420151-420151 FN2426 SNP G -> A AC=2;AN=200;BQB=0.614046;DP=3635;DP4=1901,1552,22,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.04507e-14;MQSB=0.345755;RPB=0.557987;SGB=164.789;VDB=0.262548;EFF=INTRON(MODIFIER||||627|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.1|1|1),INTRON(MODIFIER||||596|LOC_Os01g01790|protein_coding|CODING|LOC_Os01g01790.2|1|1) FN923-S.SNP.1:431308 chr01:000431308 0 W/431308-431308 FN923-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN-103.SNP.1:435026 chr01:000435026 0 W/435026-435026 FN-103 Single Base Substitution A-T INTERGENIC HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2657-S.SNP.1:440236 chr01:000440236 0 W/440236-440236 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.869375;DP=5041;DP4=2593,2204,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36769e-09;MQSB=0.980773;RPB=0.482042;SGB=47.4799;VDB=0.293362;EFF=INTRON(MODIFIER||||730|LOC_Os01g01830|protein_coding|CODING|LOC_Os01g01830.1|4|1) FN-205.SNP.1:453303 chr01:000453303 0 W/453303-453303 FN-205 Single Base Substitution A-G INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN407-S.SNP.1:453587 chr01:000453587 0 W/453587-453587 FN407-S Single Base Substitution T-G INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2180-S.SNP.1:454260 chr01:000454260 0 W/454260-454260 FN2180-S SNP T -> G AC=1;AN=190;BQB=0.758007;DP=5398;DP4=2418,2683,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14535e-10;MQSB=0.954764;RPB=0.997458;SGB=64.5316;VDB=0.471991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.1:464454 chr01:000464454 0 W/464454-464454 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.999648;DP=2388;DP4=1337,959,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.63883e-08;MQSB=0.959204;RPB=0.866956;SGB=37.4429;VDB=0.326291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:467591 chr01:000467591 0 W/467591-467591 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.985009;DP=8809;DP4=3839,4294,29,35;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.0474515;MQB=0.146623;MQSB=0;RPB=0.298112;SGB=220.528;VDB=0.0237743;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H438Y|2027|LOC_Os01g01850|protein_coding|CODING|LOC_Os01g01850.1|1|1) FN1045-S.SNP.1:473002 chr01:000473002 0 W/473002-473002 FN1045-S Single Base Substitution T-C INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN_798-4-2.SNP.1:479013 chr01:000479013 0 W/479013-479013 FN_798-4-2 Single Base Substitution T-C Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN971-S.SNP.1:489665 chr01:000489665 0 W/489665-489665 FN971-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g01900 retrotransposon protein, putative, unclassified, expressed SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-243.SNP.1:491467 chr01:000491467 0 W/491467-491467 FN-243 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g01900 retrotransposon protein, putative, unclassified, expressed SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-281.SNP.1:493054 chr01:000493054 0 W/493054-493054 FN-281 Single Base Substitution G-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-281.SNP.1:493055 chr01:000493055 0 W/493055-493055 FN-281 Single Base Substitution G-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3493-S.SNP.1:493874 chr01:000493874 0 W/493874-493874 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.930403;DP=2564;DP4=1199,1304,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000122082;MQSB=0.998306;RPB=0.407833;SGB=35.1773;VDB=0.353119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.1:495109 chr01:000495109 0 W/495109-495109 FN3764-S SNP A -> G AC=1;AN=190;BQB=0.997056;DP=2581;DP4=1211,1238,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.61249e-06;MQSB=0.991584;RPB=0.997828;SGB=44.5415;VDB=0.628403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.1:495848 chr01:000495848 0 W/495848-495848 FN1069-S Single Base Substitution A-G INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN4312-S.SNP.1:507669 chr01:000507669 0 W/507669-507669 FN4312-S SNP C -> T AC=1;AN=170;BQB=0.952611;DP=2372;DP4=1267,1013,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0897976;MQB=0.926535;MQSB=9.91582e-19;RPB=0.859475;SGB=43.4296;VDB=0.680085;EFF=INTRON(MODIFIER||||117|LOC_Os01g01925|protein_coding|CODING|LOC_Os01g01925.1|1|1) FN3526-S.SNP.1:508822 chr01:000508822 0 W/508822-508822 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.960479;DP=2804;DP4=1359,1372,3,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.88656e-09;MQSB=0.21987;RPB=0.966685;SGB=58.0655;VDB=0.472475;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L56|117|LOC_Os01g01925|protein_coding|CODING|LOC_Os01g01925.1|2|1) FN1011-S.SNP.1:521630 chr01:000521630 0 W/521630-521630 FN1011-S Single Base Substitution T-A INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN2439.SNP.1:524411 chr01:000524411 0 W/524411-524411 FN2439 SNP A -> C AC=2;AN=200;BQB=0.992633;DP=4866;DP4=2247,2348,20,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.76323e-17;MQSB=0.636644;RPB=0.99739;SGB=132.552;VDB=0.458351;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.1:528629 chr01:000528629 0 W/528629-528629 FN-390 Single Base Substitution C-T INTERGENIC HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN900-S.SNP.1:529345 chr01:000529345 0 W/529345-529345 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN3912-S.SNP.1:531349 chr01:000531349 0 W/531349-531349 FN3912-S SNP G -> A AC=2;AN=158;BQB=0.756604;DP=2232;DP4=1194,925,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.98131e-09;MQSB=0.99999;RPB=0.89189;SGB=6.19449;VDB=0.622247;EFF=INTERGENIC(MODIFIER||||||||||1) FN-69.SNP.1:536104 chr01:000536104 0 W/536104-536104 FN-69 Single Base Substitution T-A INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN-68.SNP.1:539250 chr01:000539250 0 W/539250-539250 FN-68 Single Base Substitution A-C INTRON HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3923-S.SNP.1:547533 chr01:000547533 0 W/547533-547533 FN3923-S SNP G -> A AC=2;AN=158;BQB=0.907264;DP=1591;DP4=873,572,9,8;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.03645e-06;MQSB=0.00688376;RPB=0.0058755;SGB=-16.5381;VDB=0.00878673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.1:554380 chr01:000554380 0 W/554380-554380 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.977209;DP=2890;DP4=1436,1368,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.0415e-07;MQSB=0.999834;RPB=0.979679;SGB=32.2261;VDB=0.00991078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D673N|698|LOC_Os01g02040|protein_coding|CODING|LOC_Os01g02040.1|8|1) FN-84.SNP.1:569706 chr01:000569706 0 W/569706-569706 FN-84 Single Base Substitution A-G INTRON HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN4202-S.SNP.1:573804 chr01:000573804 0 W/573804-573804 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.974935;DP=2849;DP4=1507,1246,15,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.81037e-14;MQSB=0.813465;RPB=0.629168;SGB=96.7413;VDB=0.170885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.1:578729 chr01:000578729 0 W/578729-578729 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.938339;DP=2852;DP4=1381,1368,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.48577e-10;MQSB=0.995226;RPB=0.354517;SGB=25.7969;VDB=0.778029;EFF=INTRON(MODIFIER||||477|LOC_Os01g02060|protein_coding|CODING|LOC_Os01g02060.1|1|1),INTRON(MODIFIER||||450|LOC_Os01g02060|protein_coding|CODING|LOC_Os01g02060.2|1|1) FN1024-S.SNP.1:581000 chr01:000581000 0 W/581000-581000 FN1024-S Single Base Substitution T-A INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-401.SNP.1:585478 chr01:000585478 0 W/585478-585478 FN-401 Single Base Substitution C-T INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN791-S.SNP.1:587755 chr01:000587755 0 W/587755-587755 FN791-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2268-S.SNP.1:588632 chr01:000588632 0 W/588632-588632 FN2268-S SNP A -> G AC=2;AN=190;BQB=0.0694898;DP=4316;DP4=1857,2186,19,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.3705e-26;MQSB=0.997735;RPB=0.642357;SGB=181.81;VDB=0.236577;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.1:597165 chr01:000597165 0 W/597165-597165 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2625-S.SNP.1:600353 chr01:000600353 0 W/600353-600353 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.162882;DP=4995;DP4=2708,2069,14,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.73896e-05;MQSB=0.047266;RPB=0.984698;SGB=47.7211;VDB=0.00142039;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F418|701|LOC_Os01g02100|protein_coding|CODING|LOC_Os01g02100.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F418|701|LOC_Os01g02100|protein_coding|CODING|LOC_Os01g02100.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F395|678|LOC_Os01g02100|protein_coding|CODING|LOC_Os01g02100.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F395|678|LOC_Os01g02100|protein_coding|CODING|LOC_Os01g02100.4|4|1) FN-41.SNP.1:606410 chr01:000606410 0 W/606410-606410 FN-41 Single Base Substitution T-A INTERGENIC Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN-41.SNP.1:606411 chr01:000606411 0 W/606411-606411 FN-41 Single Base Substitution T-A INTERGENIC Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN2479.SNP.1:608843 chr01:000608843 0 W/608843-608843 FN2479 SNP T -> C AC=1;AN=200;BQB=0.0631703;DP=4694;DP4=2441,1942,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.76133e-09;MQSB=0.997534;RPB=0.0339488;SGB=-11.2947;VDB=0.00919582;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.1:611148 chr01:000611148 0 W/611148-611148 FN-225 Single Base Substitution T-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN2134-S.SNP.1:611375 chr01:000611375 0 W/611375-611375 FN2134-S SNP C -> A AC=1;AN=168;BQB=0.16745;DP=4272;DP4=2333,1878,34,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40434e-14;MQSB=0.960947;RPB=0.730201;SGB=-369.422;VDB=0.594935;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.1:615446 chr01:000615446 0 W/615446-615446 FN_1017-1 Single Base Substitution C-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2735-S.SNP.1:616894 chr01:000616894 0 W/616894-616894 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.0167445;DP=3677;DP4=957,2468,6,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.67934e-07;MQSB=0.939758;RPB=0.825425;SGB=-10.0844;VDB=0.424261;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.1:618276 chr01:000618276 0 W/618276-618276 FN2118-S SNP C -> T AC=2;AN=168;BQB=0.366081;DP=3666;DP4=1771,1826,18,21;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.00381888;MQB=0.000597697;MQSB=0.113965;RPB=0.852962;SGB=-136.6;VDB=0.362342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.1:620805 chr01:000620805 0 W/620805-620805 FN2572-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2630-S.SNP.1:623728 chr01:000623728 0 W/623728-623728 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.997869;DP=4832;DP4=2247,2302,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54466e-13;MQSB=0.999999;RPB=0.306418;SGB=91.1059;VDB=0.56865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.1:647936 chr01:000647936 0 W/647936-647936 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.859936;DP=5053;DP4=2510,2267,19,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.48956e-14;MQSB=0.954917;RPB=0.872274;SGB=76.3213;VDB=0.610267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.1:656745 chr01:000656745 0 W/656745-656745 FN-201 Single Base Substitution G-A INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN-192.SNP.1:657438 chr01:000657438 0 W/657438-657438 FN-192 Single Base Substitution T-A INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN3326-S.SNP.1:658982 chr01:000658982 0 W/658982-658982 FN3326-S SNP T -> G AC=1;AN=184;BQB=0.974926;DP=2816;DP4=1305,1396,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.56538e-11;MQSB=0.777635;RPB=0.83332;SGB=63.9222;VDB=0.0895951;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.1:662794 chr01:000662794 0 W/662794-662794 FN3844-S SNP C -> A AC=1;AN=190;BQB=0.914725;DP=2825;DP4=1438,1318,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.202478;MQB=0.922664;MQSB=1.82825e-06;RPB=0.974755;SGB=44.5415;VDB=0.242386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P171H|644|LOC_Os01g02210|protein_coding|CODING|LOC_Os01g02210.1|1|1) FN3696-S.SNP.1:669550 chr01:000669550 0 W/669550-669550 FN3696-S SNP C -> T AC=1;AN=190;BQB=0.17822;DP=3351;DP4=1671,1555,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.108923;MQB=0.546886;MQSB=7.37799e-13;RPB=0.987078;SGB=14.9883;VDB=0.416357;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A465|965|LOC_Os01g02230|protein_coding|CODING|LOC_Os01g02230.1|2|1) FN3696-S.SNP.1:669551 chr01:000669551 0 W/669551-669551 FN3696-S SNP G -> T AC=1;AN=190;BQB=0.95449;DP=3339;DP4=1674,1555,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.108416;MQB=0.92196;MQSB=1.05204e-13;RPB=0.996064;SGB=67.3108;VDB=0.66157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A465E|965|LOC_Os01g02230|protein_coding|CODING|LOC_Os01g02230.1|2|1) FN2572-S.SNP.1:676117 chr01:000676117 0 W/676117-676117 FN2572-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2709-S.SNP.1:679274 chr01:000679274 0 W/679274-679274 FN2709-S SNP C -> T AC=1;AN=200;BQB=0.891537;DP=5223;DP4=2185,2759,7,8;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.154892;MQB=0.437906;MQSB=5.23136e-16;RPB=0.677403;SGB=24.2746;VDB=0.545637;EFF=INTRON(MODIFIER||||1585|LOC_Os01g02240|protein_coding|CODING|LOC_Os01g02240.1|7|1) W276-2-1.SNP.1:711026 chr01:000711026 0 W/711026-711026 W276-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN495-S.SNP.1:718524 chr01:000718524 0 W/718524-718524 FN495-S Single Base Substitution G-A INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3991-S.SNP.1:720115 chr01:000720115 0 W/720115-720115 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.933319;DP=2247;DP4=910,1246,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.5978e-06;MQSB=0.947294;RPB=0.99555;SGB=12.4615;VDB=0.971225;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.1:723072 chr01:000723072 0 W/723072-723072 FN1688-S SNP T -> A AC=1;AN=188;BQB=0.00261237;DP=3349;DP4=1603,1708,8,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.00518e-06;MQSB=0.998526;RPB=0.65274;SGB=-187.338;VDB=0.838978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D71V|617|LOC_Os01g02290|protein_coding|CODING|LOC_Os01g02290.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D71V|398|LOC_Os01g02290|protein_coding|CODING|LOC_Os01g02290.2|1|1) FN2692-S.SNP.1:727322 chr01:000727322 0 W/727322-727322 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.985306;DP=3638;DP4=1708,1701,14,3;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.307037;MQB=0.0999083;MQSB=0;RPB=0.0275258;SGB=7.88476;VDB=0.478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.1:727322 chr01:000727322 0 W/727322-727322 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.94375;DP=1503;DP4=778,633,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.19827;MQB=0.934224;MQSB=0;RPB=0.526575;SGB=25.1826;VDB=0.713138;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.1:741124 chr01:000741124 0 W/741124-741124 FN4074-S SNP T -> C AC=2;AN=182;BQB=0.314686;DP=2961;DP4=1303,1512,19,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.28835e-14;MQSB=0.814429;RPB=0.99782;SGB=70.8504;VDB=0.533756;EFF=INTRON(MODIFIER||||79|LOC_Os01g02334|protein_coding|CODING|LOC_Os01g02334.1|1|1) FN2687-S.SNP.1:741849 chr01:000741849 0 W/741849-741849 FN2687-S SNP A -> G AC=1;AN=200;BQB=0.964065;DP=4953;DP4=2258,2449,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.22979e-06;MQSB=0.994434;RPB=0.885654;SGB=22.2439;VDB=0.275286;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.1:752790 chr01:000752790 0 W/752790-752790 FN869-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN804-S.SNP.1:762794 chr01:000762794 0 W/762794-762794 FN804-S Single Base Substitution C-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN993-S.SNP.1:765930 chr01:000765930 0 W/765930-765930 FN993-S Single Base Substitution G-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN1656-S.SNP.1:786478 chr01:000786478 0 W/786478-786478 FN1656-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2108-S.SNP.1:786487 chr01:000786487 0 W/786487-786487 FN2108-S SNP G -> T AC=2;AN=168;BQB=0.892503;DP=3375;DP4=1488,1830,19,18;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0115556;MQB=1.02554e-10;MQSB=0.893672;RPB=0.967361;SGB=-7.187;VDB=0.109385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F593L|630|LOC_Os01g02430|protein_coding|CODING|LOC_Os01g02430.1|2|1) FN2108-S.SNP.1:786488 chr01:000786488 0 W/786488-786488 FN2108-S SNP A -> T AC=2;AN=168;BQB=0.260104;DP=3386;DP4=1490,1832,23,16;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.0118133;MQB=8.91867e-08;MQSB=0.909428;RPB=0.709494;SGB=-93.1751;VDB=0.176697;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F593Y|630|LOC_Os01g02430|protein_coding|CODING|LOC_Os01g02430.1|2|1) FN2551-S.SNP.1:788325 chr01:000788325 0 W/788325-788325 FN2551-S SNP T -> C AC=1;AN=186;BQB=0.892092;DP=3965;DP4=1898,1877,13,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.82278e-11;MQSB=0.862346;RPB=0.951519;SGB=81.7147;VDB=0.847824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I99V|630|LOC_Os01g02430|protein_coding|CODING|LOC_Os01g02430.1|1|1) FN2704-S.SNP.1:793267 chr01:000793267 0 W/793267-793267 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.985817;DP=4795;DP4=2315,2264,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76504e-12;MQSB=0.995176;RPB=0.208824;SGB=58.2954;VDB=0.0887681;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K54*|112|LOC_Os01g02450|protein_coding|CODING|LOC_Os01g02450.1|2|1) FN4101-S.SNP.1:797370 chr01:000797370 0 W/797370-797370 FN4101-S SNP A -> G AC=1;AN=182;BQB=0.761116;DP=3363;DP4=1413,1816,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.77242e-07;MQSB=0.712408;RPB=0.652805;SGB=13.1007;VDB=0.949761;EFF=INTRON(MODIFIER||||161|LOC_Os01g02470|protein_coding|CODING|LOC_Os01g02470.1|2|1) FN2114-S.SNP.1:803727 chr01:000803727 0 W/803727-803727 FN2114-S SNP A -> G AC=1;AN=168;BQB=0.930809;DP=3621;DP4=1958,1638,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29873e-05;MQSB=0.927488;RPB=0.817994;SGB=24.4556;VDB=0.620674;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.1:812995 chr01:000812995 0 W/812995-812995 FN855-S Single Base Substitution G-T INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN3364-S.SNP.1:814129 chr01:000814129 0 W/814129-814129 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.977729;DP=2938;DP4=1397,1420,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.99537e-07;MQSB=0.825355;RPB=0.70188;SGB=39.2697;VDB=0.577602;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.1:833170 chr01:000833170 0 W/833170-833170 FN810-S Single Base Substitution T-C INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. CW-631-3-1.SNP.1:835024 chr01:000835024 0 W/835024-835024 CW-631-3-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g02540 retrotransposon protein, putative, unclassified, expressed SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1552-S.SNP.1:856254 chr01:000856254 0 W/856254-856254 FN1552-S SNP C -> T AC=1;AN=188;BQB=0.242707;DP=2796;DP4=1907,838,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.5003e-05;MQSB=0.767852;RPB=0.0129155;SGB=-16.0863;VDB=0.224506;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.1:856560 chr01:000856560 0 W/856560-856560 FN436-S Single Base Substitution G-A INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1406-S.SNP.1:861459 chr01:000861459 0 W/861459-861459 FN1406-S Single Base Substitution C-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1638-S.SNP.1:866679 chr01:000866679 0 W/866679-866679 FN1638-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g02600 Ser/Thr receptor-like kinase, putative, expressed SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN534-S.SNP.1:875469 chr01:000875469 0 W/875469-875469 FN534-S Single Base Substitution G-C INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1113-S.SNP.1:883213 chr01:000883213 0 W/883213-883213 FN1113-S Single Base Substitution T-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3513-S.SNP.1:892895 chr01:000892895 0 W/892895-892895 FN3513-S SNP T -> C AC=2;AN=188;BQB=0.965524;DP=4634;DP4=1890,2474,14,10;HOB=0.0210502;ICB=0.494738;MQ=13;MQ0F=0.469573;MQB=0.23206;MQSB=7.30233e-22;RPB=0.82173;SGB=17.8846;VDB=0.403909;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G267|2027|LOC_Os01g02650|protein_coding|CODING|LOC_Os01g02650.1|1|1) FN3533-S.SNP.1:896599 chr01:000896599 0 W/896599-896599 FN3533-S SNP C -> T AC=1;AN=188;BQB=0.912467;DP=3659;DP4=2098,1491,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.198142;MQB=0.888925;MQSB=1.00082e-36;RPB=0.925426;SGB=85.3253;VDB=0.758048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A1478V|2027|LOC_Os01g02650|protein_coding|CODING|LOC_Os01g02650.1|2|1) FN1409-S.SNP.1:905152 chr01:000905152 0 W/905152-905152 FN1409-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1136-19-S.SNP.1:912205 chr01:000912205 0 W/912205-912205 FN1136-19-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1067-S.SNP.1:921844 chr01:000921844 0 W/921844-921844 FN1067-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN3374-S.SNP.1:930058 chr01:000930058 0 W/930058-930058 FN3374-S SNP G -> A AC=1;AN=184;BQB=0.443206;DP=2846;DP4=1453,1261,17,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55128e-13;MQSB=0.997254;RPB=0.572445;SGB=92.0965;VDB=0.98376;EFF=UTR_3_PRIME(MODIFIER||49||655|LOC_Os01g02720|protein_coding|CODING|LOC_Os01g02720.1|11|1),UTR_3_PRIME(MODIFIER||49||655|LOC_Os01g02720|protein_coding|CODING|LOC_Os01g02720.2|12|1) FN3653-S.SNP.1:935424 chr01:000935424 0 W/935424-935424 FN3653-S SNP C -> A AC=1;AN=190;BQB=0.789787;DP=2688;DP4=1571,987,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.6943e-05;MQSB=0.897973;RPB=0.575755;SGB=28.9929;VDB=0.684374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.1:936455 chr01:000936455 0 W/936455-936455 FN2376 SNP T -> A AC=1;AN=192;BQB=0.901064;DP=4832;DP4=2299,2184,18,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.83871e-13;MQSB=0.946894;RPB=0.802321;SGB=46.8644;VDB=0.440327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N333Y|625|LOC_Os01g02730|protein_coding|CODING|LOC_Os01g02730.1|3|1) FN-196.SNP.1:944464 chr01:000944464 0 W/944464-944464 FN-196 Single Base Substitution G-A INTRON HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3366-S.SNP.1:946078 chr01:000946078 0 W/946078-946078 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.717538;DP=2728;DP4=961,1660,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00183284;MQB=6.74368e-07;MQSB=0.944379;RPB=0.994837;SGB=71.3514;VDB=0.610217;EFF=INTRON(MODIFIER||||2932|LOC_Os01g02740|protein_coding|CODING|LOC_Os01g02740.1|7|1) FN3524-S.SNP.1:952067 chr01:000952067 0 W/952067-952067 FN3524-S SNP T -> C AC=1;AN=188;BQB=0.956022;DP=2634;DP4=1270,1263,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38218e-06;MQSB=0.762528;RPB=0.622707;SGB=25.3545;VDB=0.152536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T95A|2932|LOC_Os01g02740|protein_coding|CODING|LOC_Os01g02740.1|2|1) FN2667-S.SNP.1:953179 chr01:000953179 0 W/953179-953179 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.9904;DP=4324;DP4=2146,2001,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83097e-11;MQSB=0.764114;RPB=0.953819;SGB=61.9006;VDB=0.171326;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.1:953327 chr01:000953327 0 W/953327-953327 FN1222-S Single Base Substitution C-T INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN3663-S.SNP.1:953574 chr01:000953574 0 W/953574-953574 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.707494;DP=2617;DP4=1362,1154,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.39713e-06;MQSB=0.132974;RPB=0.988286;SGB=5.66499;VDB=0.0507568;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.1:963605 chr01:000963605 0 W/963605-963605 FN-85 Single Base Substitution T-A INTRON HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-85.SNP.1:963606 chr01:000963606 0 W/963606-963606 FN-85 Single Base Substitution C-A INTRON HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN3868-S.SNP.1:968358 chr01:000968358 0 W/968358-968358 FN3868-S SNP G -> T AC=1;AN=158;BQB=0.770498;DP=2782;DP4=1365,1304,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000230614;MQSB=0.888214;RPB=0.899956;SGB=23.9652;VDB=0.682972;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.1:970789 chr01:000970789 0 W/970789-970789 FN790-S Single Base Substitution G-T INTRON HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN2707-S.SNP.1:972442 chr01:000972442 0 W/972442-972442 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.978687;DP=4583;DP4=2191,2123,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000127364;MQSB=0.937261;RPB=0.576966;SGB=25.849;VDB=0.961632;EFF=INTRON(MODIFIER||||723|LOC_Os01g02780|protein_coding|CODING|LOC_Os01g02780.1|1|1) FN-198.SNP.1:976313 chr01:000976313 0 W/976313-976313 FN-198 Single Base Substitution C-T INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2489.SNP.1:976313 chr01:000976313 0 W/976313-976313 FN2489 SNP C -> T AC=2;AN=200;BQB=0.649948;DP=4833;DP4=2254,2315,23,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14792e-25;MQSB=0.911909;RPB=0.850439;SGB=99.8245;VDB=0.00703179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.1:976313 chr01:000976313 0 W/976313-976313 FN3548-S SNP C -> T AC=2;AN=188;BQB=0.994502;DP=2485;DP4=1182,1210,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.77482e-16;MQSB=0.964047;RPB=0.968968;SGB=121.672;VDB=0.901554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.1:977768 chr01:000977768 0 W/977768-977768 FN3486-S SNP A -> G AC=1;AN=184;BQB=0.999487;DP=2817;DP4=1319,1319,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19813e-11;MQSB=0.96676;RPB=0.61339;SGB=35.884;VDB=0.427177;EFF=INTRON(MODIFIER||||487|LOC_Os01g02790|protein_coding|CODING|LOC_Os01g02790.1|1|1) FN-124.SNP.1:979145 chr01:000979145 0 W/979145-979145 FN-124 Single Base Substitution A-T INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2437.SNP.1:1001614 chr01:001001614 0 W/1001614-1001614 FN2437 SNP G -> A AC=1;AN=200;BQB=0.977769;DP=4773;DP4=1950,2583,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209512;MQB=2.60558e-07;MQSB=0.921142;RPB=0.73714;SGB=19.0642;VDB=0.85881;EFF=INTRON(MODIFIER||||57|LOC_Os01g02850|protein_coding|CODING|LOC_Os01g02850.1|1|1) FN3807-S.SNP.1:1006938 chr01:001006938 0 W/1006938-1006938 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.999049;DP=2734;DP4=1409,1244,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.09818e-07;MQSB=0.971035;RPB=0.332252;SGB=32.5467;VDB=0.0172525;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P44L|1013|LOC_Os01g02860|protein_coding|CODING|LOC_Os01g02860.1|1|1) FN867-S.SNP.1:1016159 chr01:001016159 0 W/1016159-1016159 FN867-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN1520-S.SNP.1:1021042 chr01:001021042 0 W/1021042-1021042 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3851-S.SNP.1:1024003 chr01:001024003 0 W/1024003-1024003 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.955592;DP=2550;DP4=1192,1291,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=6.54936e-08;MQSB=0.956393;RPB=0.61932;SGB=47.5512;VDB=0.309041;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.1:1026147 chr01:001026147 0 W/1026147-1026147 FN3476-S SNP T -> A AC=2;AN=184;BQB=0.717029;DP=2432;DP4=1170,1159,22,10;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0;MQB=6.87558e-12;MQSB=0.308376;RPB=0.446546;SGB=139.178;VDB=0.45633;EFF=INTRON(MODIFIER||||812|LOC_Os01g02884|protein_coding|CODING|LOC_Os01g02884.1|4|1) FN3476-S.SNP.1:1026148 chr01:001026148 0 W/1026148-1026148 FN3476-S SNP C -> A AC=2;AN=184;BQB=0.924842;DP=2431;DP4=1179,1160,23,9;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0;MQB=4.7241e-11;MQSB=0.168227;RPB=0.306847;SGB=139.178;VDB=0.475954;EFF=INTRON(MODIFIER||||812|LOC_Os01g02884|protein_coding|CODING|LOC_Os01g02884.1|4|1) FN2164-S.SNP.1:1034668 chr01:001034668 0 W/1034668-1034668 FN2164-S SNP T -> C AC=1;AN=168;BQB=0.445755;DP=3471;DP4=1585,1839,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.30067e-12;MQSB=0.09028;RPB=0.992658;SGB=-110.908;VDB=0.856729;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.1:1039257 chr01:001039257 0 W/1039257-1039257 FN479-S Single Base Substitution A-G INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2106-S.SNP.1:1047270 chr01:001047270 0 W/1047270-1047270 FN2106-S SNP C -> T AC=1;AN=168;BQB=0.211443;DP=3723;DP4=1757,1918,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.8999e-07;MQSB=0.991707;RPB=0.390826;SGB=-85.2162;VDB=0.426414;EFF=START_GAINED(LOW||||424|LOC_Os01g02890|protein_coding|CODING|LOC_Os01g02890.1|1|1),UTR_5_PRIME(MODIFIER||706||424|LOC_Os01g02890|protein_coding|CODING|LOC_Os01g02890.1|1|1) FN3594-S.SNP.1:1054327 chr01:001054327 0 W/1054327-1054327 FN3594-S SNP G -> T AC=2;AN=188;BQB=0.650946;DP=2479;DP4=1302,1083,15,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.20661e-08;MQSB=0.529091;RPB=0.642276;SGB=96.2203;VDB=0.429954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.1:1057849 chr01:001057849 0 W/1057849-1057849 FN2456 SNP C -> A AC=1;AN=200;BQB=0.997496;DP=3821;DP4=1881,1679,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000261712;MQB=2.98042e-06;MQSB=0.435165;RPB=0.927035;SGB=40.4492;VDB=0.358112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A415S|562|LOC_Os01g02900|protein_coding|CODING|LOC_Os01g02900.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A355S|502|LOC_Os01g02900|protein_coding|CODING|LOC_Os01g02900.2|5|1) FN2200-S.SNP.1:1064237 chr01:001064237 0 W/1064237-1064237 FN2200-S SNP T -> A AC=1;AN=190;BQB=0.98943;DP=4319;DP4=2466,1577,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.8175e-09;MQSB=0.943802;RPB=0.730687;SGB=46.7622;VDB=0.0432122;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.1:1075552 chr01:001075552 0 W/1075552-1075552 FN1668-S SNP G -> A AC=1;AN=188;BQB=0.0620942;DP=3865;DP4=1858,1942,23,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0405e-10;MQSB=0.921581;RPB=0.552726;SGB=-358.264;VDB=0.964985;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.1:1081568 chr01:001081568 0 W/1081568-1081568 FN-200 Single Base Substitution C-A UTR_5_PRIME HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN2188-S.SNP.1:1087506 chr01:001087506 0 W/1087506-1087506 FN2188-S SNP G -> T AC=1;AN=190;BQB=0.991703;DP=5055;DP4=2306,2447,11,29;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69163e-20;MQSB=0.429321;RPB=0.970207;SGB=42.958;VDB=0.561115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.1:1087506 chr01:001087506 0 W/1087506-1087506 FN3549-S SNP G -> T AC=2;AN=188;BQB=0.757522;DP=2775;DP4=1254,1445,9,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.78523e-06;MQSB=0.99336;RPB=0.869006;SGB=53.5223;VDB=0.91653;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.1:1087506 chr01:001087506 0 W/1087506-1087506 FN956-S Single Base Substitution G-T INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2573-S.SNP.1:1090685 chr01:001090685 0 W/1090685-1090685 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.915743;DP=4017;DP4=2060,1758,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000251994;MQSB=0.732603;RPB=0.396807;SGB=31.1689;VDB=0.0831545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V509M|671|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.6|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V511M|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V511M|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V511M|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.3|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V511M|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.4|6|1) FN3110-S.SNP.1:1093167 chr01:001093167 0 W/1093167-1093167 FN3110-S SNP G -> C AC=2;AN=184;BQB=0.749808;DP=3032;DP4=1486,1416,26,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.22874e-24;MQSB=0.413564;RPB=0.972155;SGB=179.874;VDB=0.0821666;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A40|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A40|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A40|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A40|673|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.4|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A40|671|LOC_Os01g02940|protein_coding|CODING|LOC_Os01g02940.6|1|1) FN2210-S.SNP.1:1098373 chr01:001098373 0 W/1098373-1098373 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.691934;DP=4142;DP4=1870,1999,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.34016e-07;MQSB=0.97666;RPB=0.379211;SGB=49.0954;VDB=0.964611;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P190|380|LOC_Os01g02950|protein_coding|CODING|LOC_Os01g02950.1|1|1) FN1721-S.SNP.1:1110367 chr01:001110367 0 W/1110367-1110367 FN1721-S SNP G -> A AC=1;AN=188;BQB=0.321436;DP=2965;DP4=1252,1662,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.10688e-13;MQSB=2.71067e-08;RPB=0.907179;SGB=-41.9316;VDB=0.429953;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.1:1111141 chr01:001111141 0 W/1111141-1111141 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2534-S.SNP.1:1115371 chr01:001115371 0 W/1115371-1115371 FN2534-S SNP G -> A AC=2;AN=198;BQB=0.995589;DP=3535;DP4=2005,1255,14,8;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.71745e-09;MQSB=0.460556;RPB=0.973659;SGB=68.91;VDB=0.000895503;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.1:1120412 chr01:001120412 0 W/1120412-1120412 FN4183-S SNP C -> T AC=2;AN=170;BQB=0.999232;DP=1638;DP4=439,997,6,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.34391e-12;MQSB=0.351355;RPB=0.898619;SGB=76.1898;VDB=0.584184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P32S|542|LOC_Os01g02980|protein_coding|CODING|LOC_Os01g02980.1|1|1) FN895-S.SNP.1:1121314 chr01:001121314 0 W/1121314-1121314 FN895-S Single Base Substitution T-A INTRON HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1727-S.SNP.1:1121447 chr01:001121447 0 W/1121447-1121447 FN1727-S SNP C -> T AC=1;AN=188;BQB=0.0499963;DP=2902;DP4=1315,1532,14,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63123e-09;MQSB=0.948906;RPB=0.804242;SGB=-249.159;VDB=0.713555;EFF=INTRON(MODIFIER||||542|LOC_Os01g02980|protein_coding|CODING|LOC_Os01g02980.1|1|1) FN1571-S.SNP.1:1126813 chr01:001126813 0 W/1126813-1126813 FN1571-S Single Base Substitution G-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN3509-S.SNP.1:1132358 chr01:001132358 0 W/1132358-1132358 FN3509-S SNP C -> T AC=2;AN=188;BQB=0.952122;DP=2657;DP4=1277,1276,18,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.36684e-11;MQSB=0.948211;RPB=0.894119;SGB=74.9605;VDB=0.869956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.1:1133777 chr01:001133777 0 W/1133777-1133777 FN2315 SNP A -> C AC=1;AN=192;BQB=0.935043;DP=5047;DP4=2416,2363,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.33246e-11;MQSB=0.955652;RPB=0.960331;SGB=75.4235;VDB=0.473034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.1:1135083 chr01:001135083 0 W/1135083-1135083 FN3708-S SNP C -> T AC=1;AN=190;BQB=0.970291;DP=2898;DP4=1335,1414,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.737e-08;MQSB=0.99567;RPB=0.51596;SGB=67.3108;VDB=0.103143;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.1:1135403 chr01:001135403 0 W/1135403-1135403 FN-147 Single Base Substitution C-A INTERGENIC HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN933-S.SNP.1:1136559 chr01:001136559 0 W/1136559-1136559 FN933-S Single Base Substitution C-A INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3376-S.SNP.1:1138838 chr01:001138838 0 W/1138838-1138838 FN3376-S SNP G -> A AC=1;AN=184;BQB=0.749754;DP=2970;DP4=1475,1403,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0010101;MQB=2.53349e-07;MQSB=0.954188;RPB=0.650645;SGB=53.2642;VDB=0.512049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3822-S.SNP.1:1141263 chr01:001141263 0 W/1141263-1141263 FN3822-S SNP G -> C AC=1;AN=190;BQB=0.912146;DP=2136;DP4=804,1005,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000196573;MQSB=0.911249;RPB=0.76095;SGB=5.78296;VDB=0.809766;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.1:1149429 chr01:001149429 0 W/1149429-1149429 FN-348 Single Base Substitution T-A INTRON HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN3721-S.SNP.1:1180096 chr01:001180096 0 W/1180096-1180096 FN3721-S SNP G -> A AC=1;AN=190;BQB=0.9553;DP=2743;DP4=1273,1368,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.42356e-05;MQSB=0.865753;RPB=0.975774;SGB=35.4339;VDB=0.729265;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.1:1180527 chr01:001180527 0 W/1180527-1180527 FN-169 Single Base Substitution T-C INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4154-S.SNP.1:1183482 chr01:001183482 0 W/1183482-1183482 FN4154-S SNP T -> C AC=2;AN=170;BQB=0.950845;DP=2645;DP4=954,1263,16,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.22317e-13;MQSB=0.321759;RPB=0.854783;SGB=-151.212;VDB=0.0147698;EFF=UTR_5_PRIME(MODIFIER||22||342|LOC_Os01g03090|protein_coding|CODING|LOC_Os01g03090.1|1|1) FN466-S.SNP.1:1204934 chr01:001204934 0 W/1204934-1204934 FN466-S Single Base Substitution C-T INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN415-S.SNP.1:1206174 chr01:001206174 0 W/1206174-1206174 FN415-S Single Base Substitution C-T INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3717-S.SNP.1:1209499 chr01:001209499 0 W/1209499-1209499 FN3717-S SNP A -> T AC=1;AN=190;BQB=0.638015;DP=3086;DP4=1504,1444,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.01874e-05;MQSB=0.84531;RPB=0.251598;SGB=8.33661;VDB=0.386322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.1:1215433 chr01:001215433 0 W/1215433-1215433 FN2378 SNP T -> G AC=1;AN=192;BQB=0.893455;DP=5033;DP4=2211,2592,21,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26208e-22;MQSB=0.979693;RPB=0.46054;SGB=82.7652;VDB=0.038232;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.1:1215482 chr01:001215482 0 W/1215482-1215482 FN2378 SNP T -> C AC=1;AN=192;BQB=0.811237;DP=5151;DP4=2531,2425,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.62546e-20;MQSB=0.855645;RPB=0.375451;SGB=149.626;VDB=0.905919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.1:1220008 chr01:001220008 0 W/1220008-1220008 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.957344;DP=4862;DP4=2141,2480,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16258e-09;MQSB=0.999901;RPB=0.18196;SGB=86.5007;VDB=0.984583;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.1:1220102 chr01:001220102 0 W/1220102-1220102 FN4113-S SNP A -> G AC=2;AN=182;BQB=0.99777;DP=3293;DP4=1374,1768,30,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.27221e-27;MQSB=0.824763;RPB=0.999878;SGB=166.091;VDB=0.434814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.1:1221627 chr01:001221627 0 W/1221627-1221627 FN2252-S SNP C -> T AC=2;AN=190;BQB=0.813869;DP=4940;DP4=2406,2230,22,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000202429;MQB=1.36863e-18;MQSB=0.6071;RPB=0.890399;SGB=121.394;VDB=0.447447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.1:1221918 chr01:001221918 0 W/1221918-1221918 FN3897-S SNP G -> C AC=2;AN=158;BQB=0.65395;DP=2380;DP4=1157,1063,15,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.28784e-11;MQSB=0.992717;RPB=0.801014;SGB=103.87;VDB=0.559465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.1:1226725 chr01:001226725 0 W/1226725-1226725 FN1163-S Single Base Substitution C-T INTRON HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN884-S.SNP.1:1230713 chr01:001230713 0 W/1230713-1230713 FN884-S Single Base Substitution G-T INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN3370-S.SNP.1:1234380 chr01:001234380 0 W/1234380-1234380 FN3370-S SNP C -> T AC=2;AN=184;BQB=0.735041;DP=2794;DP4=1438,1283,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30795e-10;MQSB=0.996496;RPB=0.199503;SGB=40.9276;VDB=0.520917;EFF=INTRON(MODIFIER||||402|LOC_Os01g03160|protein_coding|CODING|LOC_Os01g03160.1|1|1),INTRON(MODIFIER||||402|LOC_Os01g03160|protein_coding|CODING|LOC_Os01g03160.2|1|1) FN_789-3-1.SNP.1:1241089 chr01:001241089 0 W/1241089-1241089 FN_789-3-1 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN_789-3-1.SNP.1:1241090 chr01:001241090 0 W/1241090-1241090 FN_789-3-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os01g03170 seven in absentia protein family protein, expressed SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN-124.SNP.1:1242045 chr01:001242045 0 W/1242045-1242045 FN-124 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN3365-S.SNP.1:1243354 chr01:001243354 0 W/1243354-1243354 FN3365-S SNP C -> A AC=2;AN=184;BQB=0.944488;DP=2563;DP4=1196,1298,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.4826e-13;MQSB=0.915016;RPB=0.267004;SGB=74.4875;VDB=0.0937441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.1:1244098 chr01:001244098 0 W/1244098-1244098 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2725-S.SNP.1:1251589 chr01:001251589 0 W/1251589-1251589 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.992451;DP=4520;DP4=2005,2290,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.76063e-18;MQSB=0.800007;RPB=0.817888;SGB=30.3571;VDB=0.212015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.1:1251617 chr01:001251617 0 W/1251617-1251617 FN2109-S SNP G -> C AC=1;AN=168;BQB=0.272386;DP=2413;DP4=1000,1375,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00122106;MQSB=0.96981;RPB=0.324236;SGB=34.748;VDB=0.635306;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.1:1252545 chr01:001252545 0 W/1252545-1252545 FN4161-S SNP G -> A AC=1;AN=170;BQB=0.185661;DP=2632;DP4=1241,1283,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.28114e-06;MQSB=0.405323;RPB=0.998004;SGB=87.856;VDB=0.524762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.1:1255994 chr01:001255994 0 W/1255994-1255994 FN1366-S Single Base Substitution G-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3467-S.SNP.1:1257940 chr01:001257940 0 W/1257940-1257940 FN3467-S SNP G -> C AC=2;AN=184;BQB=0.995298;DP=3180;DP4=1695,1296,22,24;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.44809e-20;MQSB=0.262018;RPB=0.857305;SGB=151.967;VDB=0.44855;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.1:1263852 chr01:001263852 0 W/1263852-1263852 FN855-S Single Base Substitution G-A INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN-274.SNP.1:1276263 chr01:001276263 0 W/1276263-1276263 FN-274 Single Base Substitution T-G INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN748-S.SNP.1:1282608 chr01:001282608 0 W/1282608-1282608 FN748-S Single Base Substitution T-C INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN321-S.SNP.1:1298208 chr01:001298208 0 W/1298208-1298208 FN321-S Single Base Substitution G-A INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3669-S.SNP.1:1330536 chr01:001330536 0 W/1330536-1330536 FN3669-S SNP C -> A AC=2;AN=190;BQB=0.963394;DP=2527;DP4=1181,1253,5,6;HOB=0.020831;ICB=0.494793;MQ=17;MQ0F=0.532252;MQB=0.399876;MQSB=0;RPB=0.998417;SGB=28.9929;VDB=0.935526;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.1:1338424 chr01:001338424 0 W/1338424-1338424 FN563-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2465.SNP.1:1340949 chr01:001340949 0 W/1340949-1340949 FN2465 SNP A -> T AC=1;AN=200;BQB=0.998721;DP=4038;DP4=1638,2234,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000247647;MQB=2.86401e-14;MQSB=0.778879;RPB=0.775898;SGB=100.316;VDB=0.383526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.1:1342320 chr01:001342320 0 W/1342320-1342320 FN3050-S SNP G -> T AC=2;AN=184;BQB=0.998897;DP=3020;DP4=1396,1522,13,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.88619e-12;MQSB=0.956688;RPB=0.702905;SGB=89.4385;VDB=0.89499;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.1:1346163 chr01:001346163 0 W/1346163-1346163 FN1467-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. W463-2-1.SNP.1:1346163 chr01:001346163 0 W/1346163-1346163 W463-2-1 Single Base Substitution T-A UTR_5_PRIME HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN-78.SNP.1:1352843 chr01:001352843 0 W/1352843-1352843 FN-78 Single Base Substitution G-A INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1461-S.SNP.1:1356851 chr01:001356851 0 W/1356851-1356851 FN1461-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os01g03370 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2301.SNP.1:1363768 chr01:001363768 0 W/1363768-1363768 FN2301 SNP C -> T AC=1;AN=192;BQB=0.913636;DP=4897;DP4=2414,2254,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.26757e-08;MQSB=0.946154;RPB=0.995581;SGB=23.7852;VDB=0.780493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C172Y|190|LOC_Os01g03380|protein_coding|CODING|LOC_Os01g03380.1|1|1) FN-217.SNP.1:1411600 chr01:001411600 0 W/1411600-1411600 FN-217 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g03500 expressed protein SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1702-S.SNP.1:1421935 chr01:001421935 0 W/1421935-1421935 FN1702-S SNP T -> A AC=2;AN=188;BQB=3.90127e-05;DP=1038;DP4=633,311,24,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.0560444;MQSB=0.9503;RPB=0.000801312;SGB=-70.0003;VDB=0.00208109;EFF=INTRON(MODIFIER||||1063|LOC_Os01g03520|protein_coding|CODING|LOC_Os01g03520.1|1|1) FN-235.SNP.1:1431727 chr01:001431727 0 W/1431727-1431727 FN-235 Single Base Substitution C-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-235.SNP.1:1431729 chr01:001431729 0 W/1431729-1431729 FN-235 Single Base Substitution G-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-181.SNP.1:1431755 chr01:001431755 0 W/1431755-1431755 FN-181 Single Base Substitution T-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-125.SNP.1:1433895 chr01:001433895 0 W/1433895-1433895 FN-125 Single Base Substitution T-C INTRON HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN856-S.SNP.1:1434883 chr01:001434883 0 W/1434883-1434883 FN856-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g03530 multicopper oxidase domain containing protein, expressed SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN3358-S.SNP.1:1435149 chr01:001435149 0 W/1435149-1435149 FN3358-S SNP G -> A AC=1;AN=184;BQB=0.670335;DP=4304;DP4=2361,1804,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.10839e-08;MQSB=0.198911;RPB=0.999934;SGB=45.9712;VDB=0.907668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V319I|582|LOC_Os01g03530|protein_coding|CODING|LOC_Os01g03530.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V319I|582|LOC_Os01g03530|protein_coding|CODING|LOC_Os01g03530.2|3|1) FN-278.SNP.1:1448524 chr01:001448524 0 W/1448524-1448524 FN-278 Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN4010-S.SNP.1:1485474 chr01:001485474 0 W/1485474-1485474 FN4010-S SNP C -> T AC=1;AN=168;BQB=0.966852;DP=1438;DP4=109,1279,0,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.00182e-08;MQSB=0.000143877;RPB=0.330015;SGB=34.748;VDB=0.252302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.1:1509169 chr01:001509169 0 W/1509169-1509169 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.964613;DP=4300;DP4=1960,2079,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.98789e-09;MQSB=0.950466;RPB=0.688018;SGB=9.3494;VDB=0.713528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R109S|360|LOC_Os01g03660|protein_coding|CODING|LOC_Os01g03660.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R109S|335|LOC_Os01g03660|protein_coding|CODING|LOC_Os01g03660.3|4|1) FN-400.SNP.1:1509530 chr01:001509530 0 W/1509530-1509530 FN-400 Single Base Substitution C-T INTRON HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN3825-S.SNP.1:1521181 chr01:001521181 0 W/1521181-1521181 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.994677;DP=2998;DP4=1683,1216,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.33175e-07;MQSB=0.993991;RPB=0.770336;SGB=18.552;VDB=0.677511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P93S|181|LOC_Os01g03690|protein_coding|CODING|LOC_Os01g03690.1|2|1) FN3709-S.SNP.1:1523291 chr01:001523291 0 W/1523291-1523291 FN3709-S SNP A -> T AC=1;AN=190;BQB=0.559187;DP=2935;DP4=1478,1354,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.35121e-07;MQSB=0.967529;RPB=0.582929;SGB=15.9981;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.1:1523292 chr01:001523292 0 W/1523292-1523292 FN3709-S SNP C -> T AC=1;AN=190;BQB=0.941353;DP=2934;DP4=1479,1369,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48123e-07;MQSB=0.97912;RPB=0.460058;SGB=44.5415;VDB=0.349765;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.1:1530015 chr01:001530015 0 W/1530015-1530015 FN4039-S SNP C -> T AC=1;AN=168;BQB=0.993973;DP=3192;DP4=1338,1711,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5217e-07;MQSB=0.115924;RPB=0.979224;SGB=19.7539;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.1:1533403 chr01:001533403 0 W/1533403-1533403 FN3453-S SNP C -> A AC=1;AN=184;BQB=0.98735;DP=2375;DP4=1043,1220,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000421053;MQB=1.82345e-08;MQSB=0.97819;RPB=0.999969;SGB=53.2642;VDB=0.521202;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.1:1535644 chr01:001535644 0 W/1535644-1535644 FN1114-S Single Base Substitution T-A INTRON HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN932-S.SNP.1:1538128 chr01:001538128 0 W/1538128-1538128 FN932-S Single Base Substitution G-A INTRON HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN1261-S.SNP.1:1538288 chr01:001538288 0 W/1538288-1538288 FN1261-S Single Base Substitution A-G INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3851-S.SNP.1:1554791 chr01:001554791 0 W/1554791-1554791 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.649317;DP=2489;DP4=1159,1205,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.03389e-07;MQSB=0.988978;RPB=0.99994;SGB=0.716704;VDB=0.774157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.1:1565304 chr01:001565304 0 W/1565304-1565304 FN3295-S SNP T -> C AC=1;AN=184;BQB=0.903417;DP=2347;DP4=1164,1079,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000128099;MQSB=0.742094;RPB=0.391126;SGB=26.1347;VDB=0.81988;EFF=UTR_5_PRIME(MODIFIER||882||291|LOC_Os01g03740|protein_coding|CODING|LOC_Os01g03740.1|1|1) FN2372.SNP.1:1568103 chr01:001568103 0 W/1568103-1568103 FN2372 SNP T -> A AC=2;AN=192;BQB=0.666791;DP=4830;DP4=2158,2331,28,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.67984e-34;MQSB=0.997898;RPB=0.702676;SGB=146.874;VDB=0.420778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y132N|308|LOC_Os01g03730|protein_coding|CODING|LOC_Os01g03730.1|3|1) FN780-S.SNP.1:1568109 chr01:001568109 0 W/1568109-1568109 FN780-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g03730 nuclease PA3, putative, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN4041-S.SNP.1:1570593 chr01:001570593 0 W/1570593-1570593 FN4041-S SNP C -> G AC=1;AN=168;BQB=0.953883;DP=2326;DP4=1216,1000,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.2635e-07;MQSB=0.941602;RPB=0.0746539;SGB=52.1728;VDB=0.225613;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L71|228|LOC_Os01g03750|protein_coding|CODING|LOC_Os01g03750.1|2|1) FN3385-S.SNP.1:1570831 chr01:001570831 0 W/1570831-1570831 FN3385-S SNP T -> C AC=2;AN=184;BQB=0.990885;DP=3527;DP4=1686,1640,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.5634e-14;MQSB=0.607804;RPB=0.548827;SGB=85.0529;VDB=0.385761;EFF=INTRON(MODIFIER||||228|LOC_Os01g03750|protein_coding|CODING|LOC_Os01g03750.1|1|1) FN3309-S.SNP.1:1571643 chr01:001571643 0 W/1571643-1571643 FN3309-S SNP A -> T AC=1;AN=184;BQB=0.871462;DP=3552;DP4=1915,1523,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.56439e-07;MQSB=0.935267;RPB=0.904153;SGB=62.3078;VDB=0.392702;EFF=UTR_3_PRIME(MODIFIER||299||586|LOC_Os01g03760|protein_coding|CODING|LOC_Os01g03760.1|10|1),UTR_3_PRIME(MODIFIER||876||509|LOC_Os01g03760|protein_coding|CODING|LOC_Os01g03760.2|9|1) FN2577-S.SNP.1:1574054 chr01:001574054 0 W/1574054-1574054 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.887396;DP=4627;DP4=2297,2085,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.34284e-11;MQSB=0.97049;RPB=0.999302;SGB=54.5295;VDB=0.0860545;EFF=INTRON(MODIFIER||||586|LOC_Os01g03760|protein_coding|CODING|LOC_Os01g03760.1|3|1),INTRON(MODIFIER||||509|LOC_Os01g03760|protein_coding|CODING|LOC_Os01g03760.2|3|1) FN2097-S.SNP.1:1582277 chr01:001582277 0 W/1582277-1582277 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.934576;DP=766;DP4=317,378,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00522193;MQB=0.000500167;MQSB=0.095932;RPB=0.837103;SGB=7.59999;VDB=0.828412;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D23|81|LOC_Os01g03770|protein_coding|CODING|LOC_Os01g03770.1|1|1) FN3339-S.SNP.1:1583187 chr01:001583187 0 W/1583187-1583187 FN3339-S SNP A -> T AC=1;AN=184;BQB=0.984798;DP=2904;DP4=1277,1551,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0192837;MQB=0.375978;MQSB=3.96768e-11;RPB=0.499583;SGB=42.7914;VDB=0.0652812;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.1:1590162 chr01:001590162 0 W/1590162-1590162 FN669-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g03780 retrotransposon protein, putative, unclassified, expressed SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-246.SNP.1:1604415 chr01:001604415 0 W/1604415-1604415 FN-246 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3930-S.SNP.1:1607936 chr01:001607936 0 W/1607936-1607936 FN3930-S SNP A -> T AC=1;AN=158;BQB=0.877363;DP=2221;DP4=1158,938,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.00857e-05;MQSB=0.707688;RPB=0.975788;SGB=30.704;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.1:1622446 chr01:001622446 0 W/1622446-1622446 FN3971-S SNP G -> T AC=1;AN=168;BQB=0.363203;DP=2462;DP4=1127,1247,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00143713;MQSB=0.949095;RPB=0.836722;SGB=24.4556;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.1:1622630 chr01:001622630 0 W/1622630-1622630 W443-5-1-3 Single Base Substitution C-T INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2223-S.SNP.1:1625695 chr01:001625695 0 W/1625695-1625695 FN2223-S SNP A -> T AC=1;AN=190;BQB=0.969621;DP=4989;DP4=1921,2615,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19133e-10;MQSB=0.763788;RPB=0.884988;SGB=-11.0065;VDB=0.820611;EFF=INTRON(MODIFIER||||263|LOC_Os01g03840|protein_coding|CODING|LOC_Os01g03840.1|2|1) FN4049-S.SNP.1:1629260 chr01:001629260 0 W/1629260-1629260 FN4049-S SNP G -> A AC=2;AN=168;BQB=0.912346;DP=2677;DP4=1192,1351,7,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.75242e-13;MQSB=0.974321;RPB=0.838846;SGB=72.4869;VDB=0.969328;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.1:1638382 chr01:001638382 0 W/1638382-1638382 FN-68 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN982-S.SNP.1:1639507 chr01:001639507 0 W/1639507-1639507 FN982-S Single Base Substitution A-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN975-S.SNP.1:1647607 chr01:001647607 0 W/1647607-1647607 FN975-S Single Base Substitution C-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2120-S.SNP.1:1647784 chr01:001647784 0 W/1647784-1647784 FN2120-S SNP A -> T AC=2;AN=168;BQB=0.985995;DP=2155;DP4=1364,731,20,5;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000464037;MQB=7.6653e-12;MQSB=6.97534e-10;RPB=0.39138;SGB=-12.3568;VDB=0.222814;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.1:1648150 chr01:001648150 0 W/1648150-1648150 FN3297-S SNP A -> T AC=1;AN=184;BQB=0.867548;DP=2887;DP4=1360,1453,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.48434e-07;MQSB=0.998768;RPB=0.663197;SGB=57.786;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.1:1648156 chr01:001648156 0 W/1648156-1648156 FN654-S Single Base Substitution C-T INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3311-S.SNP.1:1652802 chr01:001652802 0 W/1652802-1652802 FN3311-S Single Base Substitution C-A INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3939-S.SNP.1:1662781 chr01:001662781 0 W/1662781-1662781 FN3939-S SNP T -> A AC=2;AN=158;BQB=0.614614;DP=2361;DP4=1256,1015,13,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.23281e-11;MQSB=0.996322;RPB=0.466514;SGB=67.7679;VDB=0.412233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.1:1677923 chr01:001677923 0 W/1677923-1677923 FN1257-S Single Base Substitution A-G INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2558-S.SNP.1:1681452 chr01:001681452 0 W/1681452-1681452 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.51931;DP=4266;DP4=1754,2302,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.77912e-09;MQSB=0.717503;RPB=0.356133;SGB=58.7391;VDB=0.893908;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T73|86|LOC_Os01g03930|protein_coding|CODING|LOC_Os01g03930.1|2|1) FN-252.SNP.1:1689761 chr01:001689761 0 W/1689761-1689761 FN-252 Single Base Substitution G-T INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2300.SNP.1:1692662 chr01:001692662 0 W/1692662-1692662 FN2300 SNP A -> T AC=1;AN=192;BQB=0.53584;DP=5182;DP4=2681,2228,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39176e-06;MQSB=0.908725;RPB=0.952343;SGB=40.0819;VDB=0.364596;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.1:1709705 chr01:001709705 0 W/1709705-1709705 FN580-S Single Base Substitution C-G INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN631-S.SNP.1:1711668 chr01:001711668 0 W/1711668-1711668 FN631-S Single Base Substitution A-G INTERGENIC HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3362-S.SNP.1:1721290 chr01:001721290 0 W/1721290-1721290 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.921429;DP=2949;DP4=1102,1618,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03502e-06;MQSB=0.952106;RPB=0.875;SGB=32.2261;VDB=0.808889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.1:1725201 chr01:001725201 0 W/1725201-1725201 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.936144;DP=3620;DP4=1610,1805,13,30;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.71704e-24;MQSB=0.944416;RPB=0.662397;SGB=95.1683;VDB=0.388972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.1:1728257 chr01:001728257 0 W/1728257-1728257 FN3522-S SNP C -> T AC=1;AN=188;BQB=0.983578;DP=3264;DP4=1531,1662,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.32115e-06;MQSB=0.956748;RPB=0.706851;SGB=35.3493;VDB=0.488105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:1733394 chr01:001733394 0 W/1733394-1733394 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.957005;DP=4554;DP4=2142,2062,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.01263e-14;MQSB=0.999359;RPB=0.997467;SGB=78.7471;VDB=0.742606;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.1:1734143 chr01:001734143 0 W/1734143-1734143 FN-159 Single Base Substitution T-C UTR_3_PRIME HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3547-S.SNP.1:1735402 chr01:001735402 0 W/1735402-1735402 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.716531;DP=2781;DP4=1299,1421,11,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.14007e-08;MQSB=0.853077;RPB=0.911555;SGB=35.9843;VDB=0.163512;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R8|136|LOC_Os01g04005|protein_coding|CODING|LOC_Os01g04005.1|1|1) FN_776-5-1.SNP.1:1742675 chr01:001742675 0 W/1742675-1742675 FN_776-5-1 Single Base Substitution C-A HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3637-S.SNP.1:1746290 chr01:001746290 0 W/1746290-1746290 FN3637-S SNP T -> C AC=1;AN=190;BQB=0.193725;DP=2819;DP4=998,1411,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10345e-05;MQSB=0.783734;RPB=0.698073;SGB=-34.54;VDB=0.83035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.1:1746804 chr01:001746804 0 W/1746804-1746804 FN2357 SNP T -> C AC=1;AN=192;BQB=0.847883;DP=3822;DP4=1296,1804,20,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.6854e-17;MQSB=0.19238;RPB=0.634243;SGB=-94.6495;VDB=0.755415;EFF=UTR_5_PRIME(MODIFIER||284||338|LOC_Os01g04020|protein_coding|CODING|LOC_Os01g04020.2|1|1),INTRON(MODIFIER||||338|LOC_Os01g04020|protein_coding|CODING|LOC_Os01g04020.1|1|1) FN1332-S.SNP.1:1749011 chr01:001749011 0 W/1749011-1749011 FN1332-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3322-S.SNP.1:1753999 chr01:001753999 0 W/1753999-1753999 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.824097;DP=3648;DP4=1772,1665,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.76226e-12;MQSB=0.547089;RPB=0.448469;SGB=45.9712;VDB=0.463193;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.1:1765923 chr01:001765923 0 W/1765923-1765923 FN4151-S SNP A -> C AC=1;AN=170;BQB=0.949213;DP=2785;DP4=1410,1283,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.44657e-10;MQSB=0.992875;RPB=0.873134;SGB=41.7633;VDB=0.907116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E297A|1211|LOC_Os01g04070|protein_coding|CODING|LOC_Os01g04070.1|1|1) FN3666-S.SNP.1:1767546 chr01:001767546 0 W/1767546-1767546 FN3666-S SNP A -> G AC=2;AN=190;BQB=0.822571;DP=3101;DP4=1582,1371,19,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16554e-23;MQSB=0.982286;RPB=0.386696;SGB=167.496;VDB=0.0689126;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H838R|1211|LOC_Os01g04070|protein_coding|CODING|LOC_Os01g04070.1|1|1) FN3448-S.SNP.1:1778665 chr01:001778665 0 W/1778665-1778665 FN3448-S SNP A -> G AC=1;AN=184;BQB=0.718239;DP=3310;DP4=1548,1620,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62405e-09;MQSB=0.916852;RPB=0.704031;SGB=2.23696;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.1:1778666 chr01:001778666 0 W/1778666-1778666 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.486933;DP=3303;DP4=1480,1625,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.47352e-07;MQSB=0.997514;RPB=0.694208;SGB=39.699;VDB=0.696714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.1:1778950 chr01:001778950 0 W/1778950-1778950 FN3448-S SNP G -> T AC=1;AN=184;BQB=0.899881;DP=2849;DP4=1141,1631,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.99696e-09;MQSB=0.928632;RPB=0.923593;SGB=57.786;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.1:1780476 chr01:001780476 0 W/1780476-1780476 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.825439;DP=2412;DP4=1166,1142,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.3498e-07;MQSB=0.984182;RPB=0.24735;SGB=35.7479;VDB=0.781267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.1:1784288 chr01:001784288 0 W/1784288-1784288 FN2324 SNP A -> C AC=1;AN=192;BQB=0.611964;DP=5408;DP4=3088,2041,21,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18702e-17;MQSB=0.923986;RPB=0.726934;SGB=26.127;VDB=0.747097;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.1:1792318 chr01:001792318 0 W/1792318-1792318 FN548-S Single Base Substitution A-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN739-S.SNP.1:1810029 chr01:001810029 0 W/1810029-1810029 FN739-S Single Base Substitution G-C INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2097-S.SNP.1:1812639 chr01:001812639 0 W/1812639-1812639 FN2097-S SNP C -> T AC=1;AN=168;BQB=0.682736;DP=3864;DP4=1820,1991,13,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.38438e-14;MQSB=0.926188;RPB=0.824556;SGB=28.5146;VDB=0.837232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.1:1814856 chr01:001814856 0 W/1814856-1814856 FN1463-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1427-S.SNP.1:1815428 chr01:001815428 0 W/1815428-1815428 FN1427-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN-177.SNP.1:1817219 chr01:001817219 0 W/1817219-1817219 FN-177 Single Base Substitution A-G INTRON HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN3651-S.SNP.1:1820465 chr01:001820465 0 W/1820465-1820465 FN3651-S SNP C -> T AC=1;AN=190;BQB=0.951824;DP=2756;DP4=1279,1386,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.0749e-06;MQSB=0.424292;RPB=0.753168;SGB=32.5467;VDB=0.297748;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D562N|698|LOC_Os01g04140|protein_coding|CODING|LOC_Os01g04140.1|5|1) FN931-S.SNP.1:1820568 chr01:001820568 0 W/1820568-1820568 FN931-S Single Base Substitution T-G INTRON HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2792-S.SNP.1:1822144 chr01:001822144 0 W/1822144-1822144 FN2792-S SNP A -> T AC=1;AN=198;BQB=0.315834;DP=6761;DP4=3101,3123,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.105901;MQB=0.0572976;MQSB=4.14449e-06;RPB=0.234552;SGB=29.3443;VDB=0.24096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W125R|698|LOC_Os01g04140|protein_coding|CODING|LOC_Os01g04140.1|1|1) FN2348.SNP.1:1826614 chr01:001826614 0 W/1826614-1826614 FN2348 SNP T -> C AC=2;AN=192;BQB=0.640071;DP=4779;DP4=2330,2106,19,23;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00481272;MQB=1.11104e-12;MQSB=0.171958;RPB=0.151976;SGB=46.4635;VDB=0.55283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K819R|942|LOC_Os01g04150|protein_coding|CODING|LOC_Os01g04150.1|4|1) FN3811-S.SNP.1:1826931 chr01:001826931 0 W/1826931-1826931 FN3811-S SNP T -> C AC=1;AN=190;BQB=0.792082;DP=2680;DP4=1181,1415,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0205224;MQB=1.20341e-06;MQSB=0.0673695;RPB=0.587511;SGB=60.9777;VDB=0.209278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T752A|942|LOC_Os01g04150|protein_coding|CODING|LOC_Os01g04150.1|3|1) FN1213-S.SNP.1:1830135 chr01:001830135 0 W/1830135-1830135 FN1213-S Single Base Substitution A-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1571-S.SNP.1:1831793 chr01:001831793 0 W/1831793-1831793 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2242-S.SNP.1:1838931 chr01:001838931 0 W/1838931-1838931 FN2242-S SNP T -> C AC=1;AN=190;BQB=0.944583;DP=3744;DP4=1682,1259,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.43812e-09;MQSB=0.00962739;RPB=0.893387;SGB=-39.8934;VDB=0.23781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K59R|194|LOC_Os01g04170|protein_coding|CODING|LOC_Os01g04170.1|1|1) FN2486.SNP.1:1842746 chr01:001842746 0 W/1842746-1842746 FN2486 SNP G -> A AC=2;AN=200;BQB=0.302342;DP=4606;DP4=2344,1944,21,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83077e-23;MQSB=0.950881;RPB=0.984097;SGB=155.635;VDB=0.0778929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.1:1849064 chr01:001849064 0 W/1849064-1849064 FN1366-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2083-S.SNP.1:1855159 chr01:001855159 0 W/1855159-1855159 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.663278;DP=3830;DP4=1938,1833,19,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.34161e-14;MQSB=0.977518;RPB=0.417414;SGB=-162.179;VDB=0.202976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D471G|489|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.2|12|1),SPLICE_SITE_REGION(LOW||||489|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.2|12|1),SPLICE_SITE_REGION(LOW||||382|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.3|11|1),UTR_3_PRIME(MODIFIER||1170||382|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.3|11|1),INTRON(MODIFIER||||526|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.1|11|1),INTRON(MODIFIER||||382|LOC_Os01g04200|protein_coding|CODING|LOC_Os01g04200.4|10|1) FN-408.SNP.1:1857998 chr01:001857998 0 W/1857998-1857998 FN-408 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g04210 DNA binding protein, putative, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.1:1857998 chr01:001857998 0 W/1857998-1857998 FN408-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g04210 DNA binding protein, putative, expressed SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN545-S.SNP.1:1860854 chr01:001860854 0 W/1860854-1860854 FN545-S Single Base Substitution C-T INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3666-S.SNP.1:1861193 chr01:001861193 0 W/1861193-1861193 FN3666-S SNP T -> C AC=2;AN=190;BQB=0.915544;DP=2532;DP4=1313,1035,23,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.73463e-18;MQSB=0.674269;RPB=0.449508;SGB=32.0809;VDB=0.563126;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.1:1861379 chr01:001861379 0 W/1861379-1861379 FN1640-S Single Base Substitution C-T INTERGENIC Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN488-S.SNP.1:1862719 chr01:001862719 0 W/1862719-1862719 FN488-S Single Base Substitution C-A INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-334.SNP.1:1868501 chr01:001868501 0 W/1868501-1868501 FN-334 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN838-S.SNP.1:1873389 chr01:001873389 0 W/1873389-1873389 FN838-S Single Base Substitution C-G INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3845-S.SNP.1:1875513 chr01:001875513 0 W/1875513-1875513 FN3845-S SNP G -> A AC=2;AN=190;BQB=0.992005;DP=2649;DP4=972,1571,10,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.74862e-17;MQSB=0.990932;RPB=0.772982;SGB=121.957;VDB=0.628734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.1:1875765 chr01:001875765 0 W/1875765-1875765 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN544-S.SNP.1:1875880 chr01:001875880 0 W/1875880-1875880 FN544-S Single Base Substitution C-T INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN751-S.SNP.1:1881445 chr01:001881445 0 W/1881445-1881445 FN751-S Single Base Substitution G-A INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2415.SNP.1:1883794 chr01:001883794 0 W/1883794-1883794 FN2415 SNP C -> T AC=1;AN=200;BQB=0.140581;DP=4495;DP4=1650,2444,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.9294e-11;MQSB=0.902295;RPB=0.846371;SGB=-11.8999;VDB=0.48759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.1:1885418 chr01:001885418 0 W/1885418-1885418 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.611556;DP=3137;DP4=1573,1328,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000318776;MQB=9.39512e-06;MQSB=0.857647;RPB=0.573169;SGB=21.1058;VDB=0.198732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.1:1891943 chr01:001891943 0 W/1891943-1891943 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.812471;DP=5036;DP4=2387,2334,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67503e-07;MQSB=0.995363;RPB=0.287414;SGB=19.0642;VDB=0.0834917;EFF=UTR_3_PRIME(MODIFIER||23||274|LOC_Os01g04260|protein_coding|CODING|LOC_Os01g04260.1|3|1) FN1043-S.SNP.1:1905070 chr01:001905070 0 W/1905070-1905070 FN1043-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN2122-S.SNP.1:1905427 chr01:001905427 0 W/1905427-1905427 FN2122-S SNP C -> A AC=1;AN=168;BQB=0.538849;DP=3595;DP4=1654,1892,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05561e-06;MQSB=0.784228;RPB=0.943279;SGB=-159.481;VDB=0.750256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.1:1912245 chr01:001912245 0 W/1912245-1912245 FN3465-S SNP T -> A AC=1;AN=184;BQB=0.434866;DP=2684;DP4=1323,1258,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08597e-06;MQSB=0.991964;RPB=0.637009;SGB=42.7914;VDB=0.991758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.1:1914662 chr01:001914662 0 W/1914662-1914662 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.762559;DP=2273;DP4=1201,966,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000652315;MQSB=0.936998;RPB=0.967899;SGB=21.8853;VDB=0.167636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A83T|557|LOC_Os01g04300|protein_coding|CODING|LOC_Os01g04300.1|2|1) FN3466-S.SNP.1:1921845 chr01:001921845 0 W/1921845-1921845 FN3466-S SNP C -> T AC=1;AN=184;BQB=0.71759;DP=3211;DP4=1289,1735,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000311429;MQB=1.35662e-09;MQSB=0.888385;RPB=0.953094;SGB=71.3514;VDB=0.926131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.1:1921904 chr01:001921904 0 W/1921904-1921904 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.956233;DP=4062;DP4=1760,2077,8,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000738552;MQB=7.15342e-06;MQSB=0.158307;RPB=0.928734;SGB=54.2646;VDB=0.893312;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.1:1921970 chr01:001921970 0 W/1921970-1921970 FN1711-S SNP G -> A AC=1;AN=182;BQB=0.172874;DP=645;DP4=323,286,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.0026868;MQSB=0.0150877;RPB=0.983455;SGB=18.2682;VDB=0.916846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.1:1925747 chr01:001925747 0 W/1925747-1925747 FN2487 SNP G -> A AC=1;AN=200;BQB=0.0379447;DP=3662;DP4=2078,1367,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000273075;MQB=3.29288e-07;MQSB=0.99363;RPB=0.378596;SGB=3.06925;VDB=0.122427;EFF=INTRON(MODIFIER||||219|LOC_Os01g04320|protein_coding|CODING|LOC_Os01g04320.1|1|1) FN1537-S.SNP.1:1926552 chr01:001926552 0 W/1926552-1926552 FN1537-S Single Base Substitution C-A INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3675-S.SNP.1:1926552 chr01:001926552 0 W/1926552-1926552 FN3675-S SNP C -> A AC=2;AN=190;BQB=0.917347;DP=1919;DP4=779,1067,6,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.000169765;MQSB=1.44166e-07;RPB=0.999438;SGB=62.7569;VDB=0.557919;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.1:1926552 chr01:001926552 0 W/1926552-1926552 FN859-S Single Base Substitution C-A INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN-102.SNP.1:1943371 chr01:001943371 0 W/1943371-1943371 FN-102 Single Base Substitution T-C INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2713-S.SNP.1:1950405 chr01:001950405 0 W/1950405-1950405 FN2713-S SNP C -> T AC=2;AN=200;BQB=0.840776;DP=5064;DP4=2336,2441,36,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.77545e-35;MQSB=0.736701;RPB=0.984703;SGB=-52.2932;VDB=0.822933;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.1:1950405 chr01:001950405 0 W/1950405-1950405 FN4119-S SNP C -> T AC=2;AN=182;BQB=0.976512;DP=2842;DP4=1446,1324,10,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.57593e-10;MQSB=0.999614;RPB=0.321848;SGB=46.1603;VDB=0.456713;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.1:1950405 chr01:001950405 0 W/1950405-1950405 FN845-S Single Base Substitution C-T INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN1209-S.SNP.1:1963921 chr01:001963921 0 W/1963921-1963921 FN1209-S Single Base Substitution T-A INTRON HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2608-S.SNP.1:1966096 chr01:001966096 0 W/1966096-1966096 FN2608-S SNP T -> A AC=2;AN=198;BQB=0.989887;DP=4040;DP4=1903,1831,11,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.11385e-12;MQSB=0.999835;RPB=0.701921;SGB=52.7004;VDB=0.0366589;EFF=INTRON(MODIFIER||||668|LOC_Os01g04409|protein_coding|CODING|LOC_Os01g04409.1|1|1) FN1529-S.SNP.1:1970544 chr01:001970544 0 W/1970544-1970544 FN1529-S Single Base Substitution T-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3987-S.SNP.1:1973383 chr01:001973383 0 W/1973383-1973383 FN3987-S SNP G -> A AC=1;AN=168;BQB=0.444447;DP=1869;DP4=1183,614,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.4643e-06;MQSB=0.777253;RPB=0.583558;SGB=61.0344;VDB=0.43361;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.1:1974296 chr01:001974296 0 W/1974296-1974296 FN1455-S Single Base Substitution G-A INTRON HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2692-S.SNP.1:1979454 chr01:001979454 0 W/1979454-1979454 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.996245;DP=4730;DP4=2377,1986,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.41893e-17;MQSB=0.957683;RPB=0.638607;SGB=63.3521;VDB=0.402545;EFF=INTRON(MODIFIER||||666|LOC_Os01g04450|protein_coding|CODING|LOC_Os01g04450.1|1|1) FN1441-S.SNP.1:1991918 chr01:001991918 0 W/1991918-1991918 FN1441-S Single Base Substitution T-C INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1133-S.SNP.1:1996336 chr01:001996336 0 W/1996336-1996336 FN1133-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g04480 expressed protein SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN3832-S.SNP.1:1999116 chr01:001999116 0 W/1999116-1999116 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.923159;DP=3389;DP4=1558,1580,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82628e-08;MQSB=0.703238;RPB=0.189591;SGB=-36.3245;VDB=0.627676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N76S|577|LOC_Os01g04490|protein_coding|CODING|LOC_Os01g04490.1|2|1) FN1037-S.SNP.1:2004765 chr01:002004765 0 W/2004765-2004765 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1029-S.SNP.1:2005410 chr01:002005410 0 W/2005410-2005410 FN1029-S Single Base Substitution T-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. W246-5-1.SNP.1:2005649 chr01:002005649 0 W/2005649-2005649 W246-5-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2614-S.SNP.1:2006055 chr01:002006055 0 W/2006055-2006055 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.907525;DP=3930;DP4=2086,1640,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.25443e-06;MQSB=0.997213;RPB=0.937317;SGB=21.559;VDB=0.981424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.1:2007871 chr01:002007871 0 W/2007871-2007871 FN2538-S SNP C -> T AC=1;AN=198;BQB=0.982287;DP=4125;DP4=2024,1898,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.93195e-06;MQSB=0.507275;RPB=0.364296;SGB=13.7737;VDB=0.0371261;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.1:2015679 chr01:002015679 0 W/2015679-2015679 FN-408 Single Base Substitution C-T INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.1:2015679 chr01:002015679 0 W/2015679-2015679 FN408-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1466-S.SNP.1:2019320 chr01:002019320 0 W/2019320-2019320 FN1466-S Single Base Substitution T-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2128-S.SNP.1:2021787 chr01:002021787 0 W/2021787-2021787 FN2128-S SNP G -> T AC=1;AN=168;BQB=0.364026;DP=2754;DP4=1382,1320,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.05058e-08;MQSB=0.993511;RPB=0.403217;SGB=-1.53256;VDB=0.998555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V125F|250|LOC_Os01g04530|protein_coding|CODING|LOC_Os01g04530.1|1|1) FN2426.SNP.1:2022604 chr01:002022604 0 W/2022604-2022604 FN2426 SNP A -> G AC=2;AN=200;BQB=0.346615;DP=4278;DP4=1936,1950,44,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.5931e-38;MQSB=0.820582;RPB=0.838608;SGB=204.106;VDB=0.725059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.1:2023122 chr01:002023122 0 W/2023122-2023122 FN2577-S SNP C -> A AC=1;AN=198;BQB=0.999333;DP=4269;DP4=2044,1923,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.53971e-06;MQSB=0.98918;RPB=0.995494;SGB=13.7737;VDB=0.591503;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.1:2023137 chr01:002023137 0 W/2023137-2023137 FN621-S Single Base Substitution C-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2204-S.SNP.1:2025928 chr01:002025928 0 W/2025928-2025928 FN2204-S SNP G -> T AC=2;AN=186;BQB=0.999525;DP=4647;DP4=2415,1777,37,34;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0.00086077;MQB=9.93744e-26;MQSB=3.66932e-05;RPB=0.334409;SGB=152.058;VDB=0.21324;EFF=UTR_3_PRIME(MODIFIER||931||295|LOC_Os01g04540|protein_coding|CODING|LOC_Os01g04540.1|2|1) FN1042-S.SNP.1:2027345 chr01:002027345 0 W/2027345-2027345 FN1042-S Single Base Substitution A-G INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1196-S.SNP.1:2034610 chr01:002034610 0 W/2034610-2034610 FN1196-S Single Base Substitution A-G INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN2683-S.SNP.1:2035816 chr01:002035816 0 W/2035816-2035816 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.312889;DP=4907;DP4=2546,2099,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.90554e-15;MQSB=0.688546;RPB=0.768756;SGB=83.5316;VDB=0.306251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.1:2036054 chr01:002036054 0 W/2036054-2036054 FN2792-S SNP C -> T AC=1;AN=198;BQB=0.954524;DP=4921;DP4=2579,1996,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.24233e-20;MQSB=0.977999;RPB=0.180165;SGB=34.8713;VDB=0.231019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.1:2044402 chr01:002044402 0 W/2044402-2044402 FN1094-S Single Base Substitution C-G INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-202.SNP.1:2054824 chr01:002054824 0 W/2054824-2054824 FN-202 Single Base Substitution C-A INTRON HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN770-S.SNP.1:2058073 chr01:002058073 0 W/2058073-2058073 FN770-S Single Base Substitution C-T INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3515-S.SNP.1:2059643 chr01:002059643 0 W/2059643-2059643 FN3515-S SNP C -> T AC=2;AN=188;BQB=0.905814;DP=3068;DP4=1208,1756,4,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.39497e-09;MQSB=0.824907;RPB=0.954853;SGB=80.782;VDB=0.237135;EFF=INTRON(MODIFIER||||335|LOC_Os01g04590|protein_coding|CODING|LOC_Os01g04590.1|1|1) FN3484-S.SNP.1:2077297 chr01:002077297 0 W/2077297-2077297 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.871754;DP=3233;DP4=1879,1246,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.32971e-14;MQSB=0.919532;RPB=0.0967354;SGB=63.9222;VDB=0.552262;EFF=INTRON(MODIFIER||||446|LOC_Os01g04630|protein_coding|CODING|LOC_Os01g04630.1|1|1) FN3484-S.SNP.1:2077299 chr01:002077299 0 W/2077299-2077299 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.825107;DP=3238;DP4=1902,1253,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42508e-14;MQSB=0.995332;RPB=0.254054;SGB=67.4439;VDB=0.398936;EFF=INTRON(MODIFIER||||446|LOC_Os01g04630|protein_coding|CODING|LOC_Os01g04630.1|1|1) FN3944-S.SNP.1:2084505 chr01:002084505 0 W/2084505-2084505 FN3944-S SNP T -> C AC=1;AN=168;BQB=0.95946;DP=2544;DP4=1291,1159,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.08242e-07;MQSB=0.971485;RPB=0.749426;SGB=43.3113;VDB=0.088815;EFF=UTR_3_PRIME(MODIFIER||468||671|LOC_Os01g04650|protein_coding|CODING|LOC_Os01g04650.1|2|1) FN3413-S.SNP.1:2095734 chr01:002095734 0 W/2095734-2095734 FN3413-S SNP G -> C AC=1;AN=184;BQB=0.367754;DP=2811;DP4=1083,1614,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.50245e-06;MQSB=0.534668;RPB=0.931476;SGB=60.4004;VDB=0.616221;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.1:2107632 chr01:002107632 0 W/2107632-2107632 FN-149 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2282.SNP.1:2112654 chr01:002112654 0 W/2112654-2112654 FN2282 SNP G -> T AC=1;AN=192;BQB=0.19114;DP=3420;DP4=1645,1612,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.000292398;MQB=0.597733;MQSB=0.902787;RPB=0.887755;SGB=34.0426;VDB=0.983372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.1:2113400 chr01:002113400 0 W/2113400-2113400 FN1736-S SNP T -> C AC=2;AN=188;BQB=0.192296;DP=3889;DP4=2004,1825,29,21;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=2.63172e-08;MQSB=0.000467245;RPB=0.918776;SGB=3.47226;VDB=0.849548;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.1:2122813 chr01:002122813 0 W/2122813-2122813 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.737242;DP=4483;DP4=2259,2047,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.7924e-09;MQSB=0.98999;RPB=0.924943;SGB=47.4799;VDB=0.865484;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.1:2123198 chr01:002123198 0 W/2123198-2123198 FN940-S Single Base Substitution G-T INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1380-S.SNP.1:2126064 chr01:002126064 0 W/2126064-2126064 FN1380-S Single Base Substitution A-G INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN630-S.SNP.1:2127873 chr01:002127873 0 W/2127873-2127873 FN630-S Single Base Substitution G-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN_N1-213-1.SNP.1:2129256 chr01:002129256 0 W/2129256-2129256 FN_N1-213-1 Single Base Substitution G-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2387.SNP.1:2133394 chr01:002133394 0 W/2133394-2133394 FN2387 SNP G -> T AC=2;AN=192;BQB=0.0943026;DP=4982;DP4=2369,2257,32,40;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.24622e-40;MQSB=0.992956;RPB=0.738842;SGB=236.408;VDB=0.327279;EFF=INTRON(MODIFIER||||638|LOC_Os01g04720|protein_coding|CODING|LOC_Os01g04720.1|3|1),INTRON(MODIFIER||||459|LOC_Os01g04720|protein_coding|CODING|LOC_Os01g04720.2|3|1) FN1463-S.SNP.1:2141408 chr01:002141408 0 W/2141408-2141408 FN1463-S Single Base Substitution T-C INTRON HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1295-S.SNP.1:2143241 chr01:002143241 0 W/2143241-2143241 FN1295-S Single Base Substitution G-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3388-S.SNP.1:2149618 chr01:002149618 0 W/2149618-2149618 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.814833;DP=3104;DP4=1404,1577,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27011e-08;MQSB=0.294354;RPB=0.568415;SGB=60.4004;VDB=0.984094;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.1:2154875 chr01:002154875 0 W/2154875-2154875 FN_N1-130-1 Single Base Substitution C-A HET LOC_Os01g04750 B3 DNA binding domain containing protein, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN318-S.SNP.1:2160883 chr01:002160883 0 W/2160883-2160883 FN318-S Single Base Substitution C-T INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1357-S.SNP.1:2164734 chr01:002164734 0 W/2164734-2164734 FN1357-S Single Base Substitution G-C INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN4037-S.SNP.1:2166522 chr01:002166522 0 W/2166522-2166522 FN4037-S SNP T -> A AC=2;AN=168;BQB=0.995461;DP=2814;DP4=1104,1238,16,13;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0;MQB=6.61205e-11;MQSB=0.577595;RPB=0.985118;SGB=89.641;VDB=0.791686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.1:2168860 chr01:002168860 0 W/2168860-2168860 FN2293 SNP C -> T AC=1;AN=192;BQB=0.598133;DP=4326;DP4=1914,1853,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00023116;MQB=3.91389e-06;MQSB=3.18149e-05;RPB=0.04304;SGB=-95.9313;VDB=0.137467;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.1:2206111 chr01:002206111 0 W/2206111-2206111 FN4185-S SNP A -> T AC=1;AN=170;BQB=0.932796;DP=2216;DP4=1146,1015,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.00483e-08;MQSB=0.908926;RPB=0.921919;SGB=31.4354;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.1:2211529 chr01:002211529 0 W/2211529-2211529 FN2094-S SNP A -> T AC=1;AN=168;BQB=0.666315;DP=3917;DP4=1975,1888,23,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76886e-15;MQSB=0.954252;RPB=0.946781;SGB=-47.4735;VDB=0.564533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.1:2219671 chr01:002219671 0 W/2219671-2219671 FN2740-S SNP T -> C AC=2;AN=200;BQB=0.203271;DP=5017;DP4=2251,2571,28,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2139e-30;MQSB=0.906959;RPB=0.985802;SGB=252.287;VDB=0.931051;EFF=INTRON(MODIFIER||||433|LOC_Os01g04814|protein_coding|CODING|LOC_Os01g04814.1|2|1),INTRON(MODIFIER||||408|LOC_Os01g04814|protein_coding|CODING|LOC_Os01g04814.3|2|1),INTRON(MODIFIER||||399|LOC_Os01g04814|protein_coding|CODING|LOC_Os01g04814.4|2|1) FN-142.SNP.1:2223140 chr01:002223140 0 W/2223140-2223140 FN-142 Single Base Substitution G-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3362-S.SNP.1:2228478 chr01:002228478 0 W/2228478-2228478 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.991083;DP=2897;DP4=1636,1146,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.0168303;MQSB=1.47077e-08;RPB=0.960639;SGB=23.2751;VDB=0.858768;EFF=INTRON(MODIFIER||||448|LOC_Os01g04840|protein_coding|CODING|LOC_Os01g04840.1|2|1) FN1721-S.SNP.1:2239544 chr01:002239544 0 W/2239544-2239544 FN1721-S SNP A -> T AC=1;AN=188;BQB=0.344368;DP=3511;DP4=1504,1965,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.95036e-10;MQSB=0.885208;RPB=0.753324;SGB=13.2547;VDB=0.436619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.1:2242160 chr01:002242160 0 W/2242160-2242160 FN3595-S SNP C -> T AC=1;AN=190;BQB=0.973323;DP=2619;DP4=1085,1437,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.24148e-05;MQSB=0.635281;RPB=0.845383;SGB=49.0954;VDB=0.378828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.1:2248040 chr01:002248040 0 W/2248040-2248040 FN-59 Single Base Substitution T-C INTRON HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN-59.SNP.1:2248527 chr01:002248527 0 W/2248527-2248527 FN-59 Single Base Substitution T-A INTRON HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2333.SNP.1:2248648 chr01:002248648 0 W/2248648-2248648 FN2333 SNP T -> C AC=1;AN=192;BQB=0.856522;DP=5437;DP4=2827,2301,16,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.59252e-15;MQSB=0.994436;RPB=0.409831;SGB=75.4235;VDB=0.63356;EFF=INTRON(MODIFIER||||323|LOC_Os01g04860|protein_coding|CODING|LOC_Os01g04860.1|9|1) FN2629-S.SNP.1:2255333 chr01:002255333 0 W/2255333-2255333 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.485642;DP=5036;DP4=2672,1949,17,12;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0;MQB=1.83143e-09;MQSB=1.31356e-05;RPB=0.994621;SGB=94.3471;VDB=0.600772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:2258080 chr01:002258080 0 W/2258080-2258080 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.875762;DP=3294;DP4=1850,1376,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=4.42159e-06;MQSB=0.71711;RPB=0.962281;SGB=58.0655;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.1:2258358 chr01:002258358 0 W/2258358-2258358 FN2481 SNP C -> A AC=2;AN=200;BQB=0.966044;DP=4512;DP4=2069,2195,15,11;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.00199468;MQB=0.287823;MQSB=0.0165575;RPB=0.998443;SGB=83.5316;VDB=0.283396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.1:2258601 chr01:002258601 0 W/2258601-2258601 FN2540-S SNP A -> G AC=1;AN=198;BQB=0.153596;DP=3744;DP4=1785,1766,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=9.10354e-06;MQSB=6.42592e-08;RPB=0.9995;SGB=15.7299;VDB=0.657073;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.1:2259945 chr01:002259945 0 W/2259945-2259945 FN-220 Single Base Substitution A-T INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN1062-S.SNP.1:2271608 chr01:002271608 0 W/2271608-2271608 FN1062-S Single Base Substitution G-T SPLICE_SITE_REGION HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2499.SNP.1:2282398 chr01:002282398 0 W/2282398-2282398 FN2499 SNP G -> A AC=1;AN=200;BQB=0.63256;DP=4867;DP4=2283,2228,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09815e-09;MQSB=0.998201;RPB=0.996505;SGB=34.6953;VDB=0.562221;EFF=UTR_3_PRIME(MODIFIER||138||294|LOC_Os01g04930|protein_coding|CODING|LOC_Os01g04930.1|3|1) FN3858-S.SNP.1:2284226 chr01:002284226 0 W/2284226-2284226 FN3858-S SNP G -> A AC=2;AN=158;BQB=0.969909;DP=2142;DP4=1108,905,12,11;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0;MQB=4.42343e-10;MQSB=0.0570371;RPB=0.972176;SGB=40.4048;VDB=0.67201;EFF=INTRON(MODIFIER||||294|LOC_Os01g04930|protein_coding|CODING|LOC_Os01g04930.1|1|1) FN1003-S.SNP.1:2291742 chr01:002291742 0 W/2291742-2291742 FN1003-S Single Base Substitution A-G INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN-195.SNP.1:2297881 chr01:002297881 0 W/2297881-2297881 FN-195 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g04950 peptide transporter PTR2, putative, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN-287.SNP.1:2314789 chr01:002314789 0 W/2314789-2314789 FN-287 Single Base Substitution G-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN734-S.SNP.1:2314794 chr01:002314794 0 W/2314794-2314794 FN734-S Single Base Substitution G-A INTERGENIC HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN2349.SNP.1:2317446 chr01:002317446 0 W/2317446-2317446 FN2349 SNP G -> A AC=1;AN=192;BQB=0.997576;DP=4677;DP4=2309,2080,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.27204e-15;MQSB=0.749065;RPB=0.238444;SGB=69.9435;VDB=0.386863;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.1:2320499 chr01:002320499 0 W/2320499-2320499 FN561-S Single Base Substitution G-A INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN1094-S.SNP.1:2325116 chr01:002325116 0 W/2325116-2325116 FN1094-S Single Base Substitution T-C INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3438-S.SNP.1:2344171 chr01:002344171 0 W/2344171-2344171 FN3438-S SNP A -> T AC=2;AN=184;BQB=0.994166;DP=1379;DP4=482,830,4,7;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=0.100587;MQSB=0.364072;RPB=0.447376;SGB=44.2207;VDB=0.608538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.1:2351323 chr01:002351323 0 W/2351323-2351323 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.488245;DP=2728;DP4=1372,1258,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.20226e-13;MQSB=0.853346;RPB=0.765832;SGB=116.569;VDB=0.842745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R156C|322|LOC_Os01g04990|protein_coding|CODING|LOC_Os01g04990.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R156C|187|LOC_Os01g04990|protein_coding|CODING|LOC_Os01g04990.2|3|1) FN438-S.SNP.1:2352795 chr01:002352795 0 W/2352795-2352795 FN438-S Single Base Substitution C-A INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2556-S.SNP.1:2363063 chr01:002363063 0 W/2363063-2363063 FN2556-S SNP A -> G AC=2;AN=198;BQB=0.844455;DP=4005;DP4=2001,1702,27,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000249688;MQB=6.37632e-33;MQSB=0.999777;RPB=0.316401;SGB=151.512;VDB=0.0259083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L251P|671|LOC_Os01g05020|protein_coding|CODING|LOC_Os01g05020.1|1|1) FN2556-S.SNP.1:2363064 chr01:002363064 0 W/2363064-2363064 FN2556-S SNP G -> A AC=2;AN=198;BQB=0.18243;DP=4022;DP4=2048,1734,26,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000248633;MQB=6.86463e-34;MQSB=0.950507;RPB=0.597645;SGB=187.549;VDB=0.0697519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L251F|671|LOC_Os01g05020|protein_coding|CODING|LOC_Os01g05020.1|1|1) FN2298.SNP.1:2381520 chr01:002381520 0 W/2381520-2381520 FN2298 SNP C -> T AC=1;AN=192;BQB=0.969071;DP=5172;DP4=2196,2666,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=4.98262e-07;MQSB=0.810042;RPB=0.919978;SGB=46.8644;VDB=0.67947;EFF=INTRON(MODIFIER||||255|LOC_Os01g05070|protein_coding|CODING|LOC_Os01g05070.2|3|1),INTRON(MODIFIER||||258|LOC_Os01g05070|protein_coding|CODING|LOC_Os01g05070.1|3|1) FN1424-S.SNP.1:2382665 chr01:002382665 0 W/2382665-2382665 FN1424-S Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3369-S.SNP.1:2390073 chr01:002390073 0 W/2390073-2390073 FN3369-S SNP T -> G AC=2;AN=184;BQB=0.824454;DP=2929;DP4=1261,1404,18,28;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=4.63831e-26;MQSB=0.607698;RPB=0.624166;SGB=142.044;VDB=0.00655003;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q33H|337|LOC_Os01g05100|protein_coding|CODING|LOC_Os01g05100.1|2|1) FN3369-S.SNP.1:2390075 chr01:002390075 0 W/2390075-2390075 FN3369-S SNP G -> T AC=2;AN=184;BQB=0.591607;DP=2935;DP4=1278,1533,18,29;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.93495e-28;MQSB=0.467464;RPB=0.976483;SGB=173.521;VDB=0.014674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q33K|337|LOC_Os01g05100|protein_coding|CODING|LOC_Os01g05100.1|2|1) W706-3-1.SNP.1:2473638 chr01:002473638 0 W/2473638-2473638 W706-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2161-S.SNP.1:2482963 chr01:002482963 0 W/2482963-2482963 FN2161-S SNP A -> C AC=1;AN=168;BQB=0.494268;DP=3637;DP4=1751,1833,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.96367e-09;MQSB=0.982988;RPB=0.908343;SGB=-41.7816;VDB=0.33544;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.1:2520175 chr01:002520175 0 W/2520175-2520175 FN1212-S Single Base Substitution T-A INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN4224-S.SNP.1:2521634 chr01:002521634 0 W/2521634-2521634 FN4224-S SNP G -> T AC=2;AN=170;BQB=0.865207;DP=2641;DP4=1102,1460,9,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.97213e-16;MQSB=0.932635;RPB=0.870182;SGB=105.627;VDB=0.00730591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A210S|278|LOC_Os01g05340|protein_coding|CODING|LOC_Os01g05340.1|2|1) FN4224-S.SNP.1:2521635 chr01:002521635 0 W/2521635-2521635 FN4224-S SNP C -> T AC=2;AN=170;BQB=0.962797;DP=2639;DP4=1102,1459,10,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.56311e-17;MQSB=0.969496;RPB=0.804087;SGB=79.6325;VDB=0.0142437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A210V|278|LOC_Os01g05340|protein_coding|CODING|LOC_Os01g05340.1|2|1) FN2202-S.SNP.1:2543283 chr01:002543283 0 W/2543283-2543283 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.678946;DP=4619;DP4=2364,1974,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82182e-06;MQSB=0.564462;RPB=0.236921;SGB=39.6545;VDB=0.55619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.1:2549447 chr01:002549447 0 W/2549447-2549447 FN1309-S Single Base Substitution G-A INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1675-S.SNP.1:2549452 chr01:002549452 0 W/2549452-2549452 FN1675-S SNP C -> T AC=2;AN=188;BQB=0.572833;DP=2219;DP4=1186,991,14,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=3.17362e-05;MQSB=0.0442077;RPB=0.749168;SGB=-11.74;VDB=0.0810929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.1:2552537 chr01:002552537 0 W/2552537-2552537 FN1058-S Single Base Substitution A-G INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2275-S.SNP.1:2557267 chr01:002557267 0 W/2557267-2557267 FN2275-S SNP T -> C AC=1;AN=190;BQB=0.721259;DP=4331;DP4=1863,2047,26,24;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.83341e-17;MQSB=0.00418744;RPB=0.663562;SGB=3.9482;VDB=0.0898981;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.1:2575562 chr01:002575562 0 W/2575562-2575562 FN819-S Single Base Substitution G-T INTERGENIC HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3595-S.SNP.1:2585162 chr01:002585162 0 W/2585162-2585162 FN3595-S SNP A -> G AC=1;AN=190;BQB=0.979642;DP=2726;DP4=1258,1380,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13333e-07;MQSB=0.310881;RPB=0.60034;SGB=62.7569;VDB=0.402837;EFF=UTR_3_PRIME(MODIFIER||170||472|LOC_Os01g05480|protein_coding|CODING|LOC_Os01g05480.1|8|1),UTR_3_PRIME(MODIFIER||170||304|LOC_Os01g05480|protein_coding|CODING|LOC_Os01g05480.2|7|1),UTR_3_PRIME(MODIFIER||170||554|LOC_Os01g05480|protein_coding|CODING|LOC_Os01g05480.3|8|1) FN-408.SNP.1:2590346 chr01:002590346 0 W/2590346-2590346 FN-408 Single Base Substitution C-T INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN1523-S.SNP.1:2607388 chr01:002607388 0 W/2607388-2607388 FN1523-S Single Base Substitution A-G INTRON HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN2417.SNP.1:2611629 chr01:002611629 0 W/2611629-2611629 FN2417 SNP T -> C AC=1;AN=200;BQB=0.793064;DP=4966;DP4=2188,2491,6,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=5.33045e-05;MQSB=0.0271012;RPB=0.936842;SGB=40.2696;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y2053H|2056|LOC_Os01g05500|protein_coding|CODING|LOC_Os01g05500.1|19|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y2053H|2056|LOC_Os01g05500|protein_coding|CODING|LOC_Os01g05500.2|19|1) FN1537-S.SNP.1:2661195 chr01:002661195 0 W/2661195-2661195 FN1537-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g05570 expressed protein SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN429-S.SNP.1:2662527 chr01:002662527 0 W/2662527-2662527 FN429-S Single Base Substitution G-A INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-217.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN-217 Single Base Substitution C-A INTRON HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-238.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN-238 Single Base Substitution C-A INTRON HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1045-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1045-S Single Base Substitution C-A INTRON HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1116-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1116-S Single Base Substitution C-A INTRON HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1416-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1416-S Single Base Substitution C-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1434-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1434-S Single Base Substitution C-A INTRON HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1526-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1526-S Single Base Substitution C-A INTRON HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1640-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1640-S Single Base Substitution C-A INTRON Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1719-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN1719-S SNP C -> A AC=2;AN=188;BQB=0.461589;DP=4247;DP4=2625,1561,29,17;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0;MQB=4.56387e-10;MQSB=0.00523235;RPB=0.825222;SGB=-200.853;VDB=0.147689;EFF=INTRON(MODIFIER||||64|LOC_Os01g05585|protein_coding|CODING|LOC_Os01g05585.1|1|1) FN3468-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN3468-S SNP C -> A AC=1;AN=184;BQB=0.277651;DP=3475;DP4=1839,1535,16,15;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=3.6033e-08;MQSB=0.999741;RPB=0.906221;SGB=134.656;VDB=0.463973;EFF=INTRON(MODIFIER||||64|LOC_Os01g05585|protein_coding|CODING|LOC_Os01g05585.1|1|1) FN3521-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN3521-S SNP C -> A AC=1;AN=188;BQB=0.994934;DP=3406;DP4=1910,1429,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0;MQB=6.03867e-05;MQSB=0.980979;RPB=0.848259;SGB=53.5223;VDB=0.127562;EFF=INTRON(MODIFIER||||64|LOC_Os01g05585|protein_coding|CODING|LOC_Os01g05585.1|1|1) FN4064-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN4064-S SNP C -> A AC=2;AN=168;BQB=0.647744;DP=3389;DP4=1843,1417,15,15;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0;MQB=1.09314e-13;MQSB=0.587422;RPB=0.874379;SGB=127.497;VDB=0.0197426;EFF=INTRON(MODIFIER||||64|LOC_Os01g05585|protein_coding|CODING|LOC_Os01g05585.1|1|1) FN573-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN573-S Single Base Substitution C-A INTRON HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN666-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN666-S Single Base Substitution C-A INTRON HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN976-S.SNP.1:2665738 chr01:002665738 0 W/2665738-2665738 FN976-S Single Base Substitution C-A INTRON HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1566-S.SNP.1:2670148 chr01:002670148 0 W/2670148-2670148 FN1566-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os01g05600 NBS-LRR disease resistance protein, putative, expressed SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2267-S.SNP.1:2678691 chr01:002678691 0 W/2678691-2678691 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.921069;DP=5025;DP4=2306,2304,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.72104e-06;MQSB=4.4439e-10;RPB=0.98062;SGB=41.5369;VDB=0.202948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.1:2680370 chr01:002680370 0 W/2680370-2680370 FN2456 SNP C -> T AC=1;AN=200;BQB=0.548723;DP=4971;DP4=2270,2372,10,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=9.57683e-10;MQSB=5.23878e-05;RPB=0.818234;SGB=61.9006;VDB=0.0423861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.1:2682992 chr01:002682992 0 W/2682992-2682992 FN3678-S SNP C -> G AC=1;AN=190;BQB=0.715818;DP=3058;DP4=1554,1411,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11049e-06;MQSB=0.979537;RPB=0.914588;SGB=13.4442;VDB=0.933481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R666T|989|LOC_Os01g05620|protein_coding|CODING|LOC_Os01g05620.1|1|1) FN2611-S.SNP.1:2693981 chr01:002693981 0 W/2693981-2693981 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.862783;DP=5011;DP4=2251,2377,23,17;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=1.81604e-06;MQSB=0.173445;RPB=0.996517;SGB=44.8037;VDB=0.558891;EFF=INTRON(MODIFIER||||82|LOC_Os01g05650|protein_coding|CODING|LOC_Os01g05650.1|2|1) FN1526-S.SNP.1:2695879 chr01:002695879 0 W/2695879-2695879 FN1526-S Single Base Substitution G-A INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN2756-S.SNP.1:2705820 chr01:002705820 0 W/2705820-2705820 FN2756-S SNP T -> A AC=1;AN=200;BQB=0.635004;DP=4808;DP4=2166,2382,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13461e-14;MQSB=0.995387;RPB=0.766929;SGB=47.7211;VDB=0.0463788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.1:2705821 chr01:002705821 0 W/2705821-2705821 FN2756-S SNP T -> A AC=1;AN=200;BQB=0.993036;DP=4800;DP4=2161,2394,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38174e-14;MQSB=0.995736;RPB=0.869935;SGB=69.1109;VDB=0.0306164;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.1:2705904 chr01:002705904 0 W/2705904-2705904 W453-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN4116-S.SNP.1:2710363 chr01:002710363 0 W/2710363-2710363 FN4116-S SNP T -> A AC=2;AN=182;BQB=0.968683;DP=3192;DP4=1313,1791,9,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.89304e-13;MQSB=0.91977;RPB=0.986298;SGB=63.7146;VDB=0.681929;EFF=INTRON(MODIFIER||||310|LOC_Os01g05670|protein_coding|CODING|LOC_Os01g05670.1|2|1) FN2420.SNP.1:2758247 chr01:002758247 0 W/2758247-2758247 FN2420 SNP G -> A AC=2;AN=200;BQB=0.919342;DP=4613;DP4=2535,1788,26,15;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=8.45046e-14;MQSB=0.00322857;RPB=0.450111;SGB=92.009;VDB=0.445017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.1:2772763 chr01:002772763 0 W/2772763-2772763 FN2458 SNP C -> T AC=1;AN=200;BQB=0.759158;DP=4706;DP4=2153,2281,7,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.0905404;MQSB=0.933087;RPB=0.591225;SGB=77.2904;VDB=0.233744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P328L|460|LOC_Os01g05800|protein_coding|CODING|LOC_Os01g05800.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P328L|459|LOC_Os01g05800|protein_coding|CODING|LOC_Os01g05800.2|8|1) FN3951-S.SNP.1:2787232 chr01:002787232 0 W/2787232-2787232 FN3951-S SNP T -> A AC=1;AN=168;BQB=0.987486;DP=1780;DP4=1394,302,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.342265;MQSB=0.248597;RPB=0.525869;SGB=24.4556;VDB=0.690639;EFF=INTRON(MODIFIER||||563|LOC_Os01g05820|protein_coding|CODING|LOC_Os01g05820.1|2|1) FN2767-S.SNP.1:2814299 chr01:002814299 0 W/2814299-2814299 FN2767-S SNP C -> A AC=1;AN=198;BQB=0.206604;DP=4330;DP4=2222,1816,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=2.90692e-07;MQSB=0.0357231;RPB=0.287505;SGB=77.1196;VDB=0.433909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P954T|1065|LOC_Os01g05870|protein_coding|CODING|LOC_Os01g05870.1|3|1) FN3626-S.SNP.1:2831713 chr01:002831713 0 W/2831713-2831713 FN3626-S SNP A -> T AC=1;AN=190;BQB=0.810462;DP=3141;DP4=1457,1557,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000120027;MQSB=0.999982;RPB=0.883249;SGB=25.439;VDB=0.705724;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K463N|1410|LOC_Os01g05940|protein_coding|CODING|LOC_Os01g05940.1|1|1),INTRON(MODIFIER||||153|LOC_Os01g05900|protein_coding|CODING|LOC_Os01g05900.1|1|1) FN1596-S.SNP.1:2836818 chr01:002836818 0 W/2836818-2836818 FN1596-S Single Base Substitution C-T INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN-312.SNP.1:2841562 chr01:002841562 0 W/2841562-2841562 FN-312 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN2595-S.SNP.1:2842270 chr01:002842270 0 W/2842270-2842270 FN2595-S SNP A -> G AC=2;AN=198;BQB=0.997769;DP=4489;DP4=2242,2020,31,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.51553e-26;MQSB=0.837472;RPB=0.966793;SGB=109.793;VDB=0.272026;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V764|1051|LOC_Os01g05960|protein_coding|CODING|LOC_Os01g05960.1|1|1) FN404-S.SNP.1:2844904 chr01:002844904 0 W/2844904-2844904 FN404-S Single Base Substitution C-G INTRON HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN4093-S.SNP.1:2847443 chr01:002847443 0 W/2847443-2847443 FN4093-S SNP A -> G AC=1;AN=182;BQB=0.997994;DP=3236;DP4=1505,1634,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.96998e-07;MQSB=0.600599;RPB=0.952868;SGB=35.6277;VDB=0.755921;EFF=INTRON(MODIFIER||||107|LOC_Os01g05970|protein_coding|CODING|LOC_Os01g05970.1|1|1) FN821-S.SNP.1:2849232 chr01:002849232 0 W/2849232-2849232 FN821-S Single Base Substitution A-G INTRON HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN3465-S.SNP.1:2857976 chr01:002857976 0 W/2857976-2857976 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.814677;DP=3353;DP4=1687,1548,13,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00029824;MQB=1.14376e-16;MQSB=0.622549;RPB=0.622308;SGB=88.5747;VDB=0.753674;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P28|107|LOC_Os01g05970|protein_coding|CODING|LOC_Os01g05970.1|1|1) FN4185-S.SNP.1:2877914 chr01:002877914 0 W/2877914-2877914 FN4185-S SNP C -> A AC=2;AN=170;BQB=0.800773;DP=1943;DP4=947,939,7,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08921e-08;MQSB=0.95892;RPB=0.956586;SGB=70.0854;VDB=0.794916;EFF=INTRON(MODIFIER||||382|LOC_Os01g06020|protein_coding|CODING|LOC_Os01g06020.1|1|1) FN4112-S.SNP.1:2879274 chr01:002879274 0 W/2879274-2879274 FN4112-S SNP G -> C AC=2;AN=182;BQB=0.784321;DP=3082;DP4=1366,1614,20,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.78719e-23;MQSB=0.986348;RPB=0.817864;SGB=133.932;VDB=0.826583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E180Q|382|LOC_Os01g06020|protein_coding|CODING|LOC_Os01g06020.1|5|1) FN4108-S.SNP.1:2883793 chr01:002883793 0 W/2883793-2883793 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.992912;DP=3029;DP4=1253,1676,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.97585e-06;MQSB=0.959244;RPB=0.954031;SGB=35.6277;VDB=0.332906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.1:2884424 chr01:002884424 0 W/2884424-2884424 FN2627-S SNP C -> T AC=1;AN=200;BQB=0.993665;DP=4054;DP4=1515,2245,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00024667;MQB=1.44474e-10;MQSB=0.965053;RPB=0.981814;SGB=77.2904;VDB=0.821641;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.1:2905480 chr01:002905480 0 W/2905480-2905480 FN_N1-130-1 Single Base Substitution C-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN_N1-130-1.SNP.1:2905799 chr01:002905799 0 W/2905799-2905799 FN_N1-130-1 Single Base Substitution G-C HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1582-S.SNP.1:2905956 chr01:002905956 0 W/2905956-2905956 FN1582-S Single Base Substitution C-T INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN2540-S.SNP.1:2922041 chr01:002922041 0 W/2922041-2922041 FN2540-S SNP A -> G AC=2;AN=198;BQB=0.157867;DP=4240;DP4=2292,1673,25,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.713e-20;MQSB=0.281333;RPB=0.786988;SGB=6.99342;VDB=0.70213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.1:2924042 chr01:002924042 0 W/2924042-2924042 FN3382-S SNP C -> T AC=2;AN=184;BQB=0.658735;DP=3162;DP4=1640,1400,27,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.42263e-24;MQSB=0.981181;RPB=0.755076;SGB=148.445;VDB=0.778895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H17Y|236|LOC_Os01g06130|protein_coding|CODING|LOC_Os01g06130.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H17Y|236|LOC_Os01g06130|protein_coding|CODING|LOC_Os01g06130.2|2|1) FN3733-S.SNP.1:2928585 chr01:002928585 0 W/2928585-2928585 FN3733-S SNP T -> A AC=2;AN=190;BQB=0.918966;DP=3008;DP4=1355,1450,19,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.44914e-15;MQSB=0.976968;RPB=0.68119;SGB=100.07;VDB=0.488144;EFF=UTR_3_PRIME(MODIFIER||334||238|LOC_Os01g06140|protein_coding|CODING|LOC_Os01g06140.1|3|1) FN511-S.SNP.1:2936876 chr01:002936876 0 W/2936876-2936876 FN511-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g06160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3657-S.SNP.1:2951864 chr01:002951864 0 W/2951864-2951864 FN3657-S SNP C -> A AC=1;AN=190;BQB=0.978788;DP=2222;DP4=1242,911,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.000450045;MQB=0.00237504;MQSB=0.000274097;RPB=0.994176;SGB=35.4339;VDB=0.878576;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G358V|776|LOC_Os01g06200|protein_coding|CODING|LOC_Os01g06200.1|2|1) FN2640-S.SNP.1:2955991 chr01:002955991 0 W/2955991-2955991 FN2640-S SNP A -> C AC=1;AN=200;BQB=0.812344;DP=5282;DP4=2480,2561,13,7;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=0.000157111;MQSB=0.981254;RPB=0.9102;SGB=12.7003;VDB=0.159721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.1:2956370 chr01:002956370 0 W/2956370-2956370 FN2244-S SNP G -> A AC=2;AN=190;BQB=0.99453;DP=4843;DP4=1879,2653,22,15;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0;MQB=0.100105;MQSB=0.980756;RPB=0.0194068;SGB=121.394;VDB=0.349928;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.1:2957533 chr01:002957533 0 W/2957533-2957533 FN-169 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g06220 gibberellin receptor GID1L2, putative, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1278-S.SNP.1:2958775 chr01:002958775 0 W/2958775-2958775 FN1278-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2355.SNP.1:2960789 chr01:002960789 0 W/2960789-2960789 FN2355 SNP A -> G AC=1;AN=192;BQB=0.742781;DP=4862;DP4=2197,2214,5,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=6.24423e-07;MQSB=0.496303;RPB=0.476866;SGB=34.0426;VDB=0.188729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.1:2968189 chr01:002968189 0 W/2968189-2968189 FN1667-S SNP A -> G AC=1;AN=188;BQB=0.0308691;DP=3329;DP4=1443,1853,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.0469e-09;MQSB=0.464855;RPB=0.626935;SGB=64.3306;VDB=0.784392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.1:2972300 chr01:002972300 0 W/2972300-2972300 FN2435 SNP A -> G AC=1;AN=200;BQB=0.954259;DP=4383;DP4=1770,2075,14,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.21284e-12;MQSB=0.0774922;RPB=0.968705;SGB=-80.6278;VDB=0.702459;EFF=INTRON(MODIFIER||||540|LOC_Os01g06270|protein_coding|CODING|LOC_Os01g06270.1|14|1),INTRON(MODIFIER||||391|LOC_Os01g06270|protein_coding|CODING|LOC_Os01g06270.2|11|1) FN1501-S.SNP.1:2998696 chr01:002998696 0 W/2998696-2998696 FN1501-S Single Base Substitution G-A INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W416-6-1.SNP.1:3006131 chr01:003006131 0 W/3006131-3006131 W416-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1571-S.SNP.1:3008245 chr01:003008245 0 W/3008245-3008245 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN3902-S.SNP.1:3026804 chr01:003026804 0 W/3026804-3026804 FN3902-S SNP T -> C AC=1;AN=158;BQB=0.976606;DP=2930;DP4=1402,1205,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.000341297;MQB=0.000156673;MQSB=0.963145;RPB=0.999745;SGB=34.0735;VDB=0.109379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.1:3035611 chr01:003035611 0 W/3035611-3035611 FN1460-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g06420 expressed protein SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1020-S.SNP.1:3055733 chr01:003055733 0 W/3055733-3055733 FN1020-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g06490 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN4084-S.SNP.1:3068246 chr01:003068246 0 W/3068246-3068246 FN4084-S SNP T -> C AC=1;AN=182;BQB=0.999851;DP=3178;DP4=1521,1558,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.73199e-10;MQSB=0.0171263;RPB=0.383231;SGB=28.1658;VDB=0.10956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K964R|1021|LOC_Os01g06520|protein_coding|CODING|LOC_Os01g06520.1|1|1) FN463-S.SNP.1:3084578 chr01:003084578 0 W/3084578-3084578 FN463-S Single Base Substitution G-C INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN-181.SNP.1:3085177 chr01:003085177 0 W/3085177-3085177 FN-181 Single Base Substitution A-G INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3363-S.SNP.1:3107626 chr01:003107626 0 W/3107626-3107626 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.873735;DP=3324;DP4=1627,1590,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.95769e-09;MQSB=0.945932;RPB=0.51229;SGB=49.835;VDB=0.144951;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.1:3121199 chr01:003121199 0 W/3121199-3121199 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.639192;DP=3728;DP4=1810,1649,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00026824;MQB=0.0319192;MQSB=0.745491;RPB=0.992152;SGB=30.8063;VDB=0.55693;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.1:3129725 chr01:003129725 0 W/3129725-3129725 FN4090-S SNP A -> T AC=1;AN=182;BQB=0.936401;DP=3268;DP4=1605,1572,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=0.000760697;MQSB=0.156414;RPB=0.618786;SGB=35.0899;VDB=0.410847;EFF=UTR_5_PRIME(MODIFIER||242||162|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.3|2|1),INTRON(MODIFIER||||258|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.1|2|1),INTRON(MODIFIER||||258|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.2|1|1) FN3919-S.SNP.1:3130055 chr01:003130055 0 W/3130055-3130055 FN3919-S SNP T -> G AC=2;AN=158;BQB=0.916419;DP=2352;DP4=1259,976,23,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.44671e-24;MQSB=0.684894;RPB=0.398321;SGB=155.234;VDB=0.457076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L30R|162|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L126R|258|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L126R|258|LOC_Os01g06640|protein_coding|CODING|LOC_Os01g06640.2|2|1) FN2657-S.SNP.1:3131828 chr01:003131828 0 W/3131828-3131828 FN2657-S SNP G -> T AC=1;AN=200;BQB=0.652664;DP=5072;DP4=2366,2410,20,17;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=8.43156e-16;MQSB=0.298906;RPB=0.560204;SGB=123.188;VDB=0.817963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.1:3133114 chr01:003133114 0 W/3133114-3133114 FN1252-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2595-S.SNP.1:3141924 chr01:003141924 0 W/3141924-3141924 FN2595-S SNP A -> T AC=1;AN=198;BQB=0.966143;DP=4179;DP4=2336,1542,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=0.000502258;MQSB=0.707063;RPB=0.999977;SGB=29.3637;VDB=0.296573;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.1:3173454 chr01:003173454 0 W/3173454-3173454 FN976-S Single Base Substitution C-G INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1461-S.SNP.1:3183163 chr01:003183163 0 W/3183163-3183163 FN1461-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g06730 verticillium wilt disease resistance protein, putative, expressed SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. W423-5-1.SNP.1:3191504 chr01:003191504 0 W/3191504-3191504 W423-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. W423-5-1.SNP.1:3191505 chr01:003191505 0 W/3191505-3191505 W423-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN3105-S.SNP.1:3216372 chr01:003216372 0 W/3216372-3216372 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.895456;DP=2640;DP4=950,1620,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.00568182;MQB=0.327942;MQSB=1.29127e-28;RPB=0.276442;SGB=62.3078;VDB=0.135952;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.1:3225194 chr01:003225194 0 W/3225194-3225194 FN1573-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g06790 disease resistance protein, putative, expressed SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN660-S.SNP.1:3225450 chr01:003225450 0 W/3225450-3225450 FN660-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g06790 disease resistance protein, putative, expressed SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1202-S.SNP.1:3236582 chr01:003236582 0 W/3236582-3236582 FN1202-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g06820 hcr2-0B, putative, expressed SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1707-S.SNP.1:3237224 chr01:003237224 0 W/3237224-3237224 FN1707-S SNP A -> G AC=1;AN=188;BQB=0.989954;DP=2847;DP4=1140,1669,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0;MQB=0.993927;MQSB=0.0001654;RPB=0.198478;SGB=0.908326;VDB=0.0800219;EFF=INTRON(MODIFIER||||334|LOC_Os01g06820|protein_coding|CODING|LOC_Os01g06820.1|1|1) FN1700-S.SNP.1:3253628 chr01:003253628 0 W/3253628-3253628 FN1700-S SNP A -> T AC=1;AN=188;BQB=0.593479;DP=4230;DP4=1973,2221,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.90068e-09;MQSB=0.980688;RPB=0.995314;SGB=8.62479;VDB=0.603062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.1:3254152 chr01:003254152 0 W/3254152-3254152 FN1696-S SNP T -> A AC=2;AN=188;BQB=0.213944;DP=4117;DP4=2165,1906,16,14;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.03154e-08;MQSB=0.000829764;RPB=0.472762;SGB=96.2203;VDB=0.0370349;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.1:3287888 chr01:003287888 0 W/3287888-3287888 FN_N1-130-1 Single Base Substitution C-G HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2454.SNP.1:3316223 chr01:003316223 0 W/3316223-3316223 FN2454 SNP C -> T AC=1;AN=200;BQB=0.995829;DP=4884;DP4=2682,1945,12,14;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=8.67634e-08;MQSB=0.0416126;RPB=0.0920231;SGB=22.3313;VDB=0.679585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.1:3318456 chr01:003318456 0 W/3318456-3318456 FN3425-S SNP T -> C AC=1;AN=184;BQB=0.999785;DP=2407;DP4=1110,1199,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0;MQB=0.036916;MQSB=0.270197;RPB=0.0855039;SGB=18.2315;VDB=0.0235879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.1:3322216 chr01:003322216 0 W/3322216-3322216 FN1647-S Single Base Substitution C-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. W674-4-1.SNP.1:3323482 chr01:003323482 0 W/3323482-3323482 W674-4-1 Single Base Substitution G-A INTRON HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN992-S.SNP.1:3347056 chr01:003347056 0 W/3347056-3347056 FN992-S Single Base Substitution A-T INTRON HOMO SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN3375-S.SNP.1:3357823 chr01:003357823 0 W/3357823-3357823 FN3375-S SNP C -> T AC=1;AN=184;BQB=0.964544;DP=2958;DP4=1369,1504,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.35925e-09;MQSB=0.980417;RPB=0.892274;SGB=57.786;VDB=0.791606;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C149|281|LOC_Os01g07120|protein_coding|CODING|LOC_Os01g07120.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C142|274|LOC_Os01g07120|protein_coding|CODING|LOC_Os01g07120.2|2|1) FN2386.SNP.1:3359646 chr01:003359646 0 W/3359646-3359646 FN2386 SNP G -> A AC=1;AN=192;BQB=0.288146;DP=5092;DP4=2356,2382,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.11072e-14;MQSB=0.684908;RPB=0.938549;SGB=59.6861;VDB=0.270152;EFF=INTRON(MODIFIER||||502|LOC_Os01g07130|protein_coding|CODING|LOC_Os01g07130.1|1|1),INTRON(MODIFIER||||274|LOC_Os01g07120|protein_coding|CODING|LOC_Os01g07120.2|2|1) FN2301.SNP.1:3376762 chr01:003376762 0 W/3376762-3376762 FN2301 SNP C -> A AC=1;AN=192;BQB=0.995804;DP=4582;DP4=2111,2188,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01546e-05;MQSB=0.593792;RPB=0.638025;SGB=29.087;VDB=0.22041;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S57*|170|LOC_Os01g07150|protein_coding|CODING|LOC_Os01g07150.1|1|1) FN1441-S.SNP.1:3380478 chr01:003380478 0 W/3380478-3380478 FN1441-S Single Base Substitution A-C INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1441-S.SNP.1:3380479 chr01:003380479 0 W/3380479-3380479 FN1441-S Single Base Substitution C-T INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN568-S.SNP.1:3383902 chr01:003383902 0 W/3383902-3383902 FN568-S Single Base Substitution C-T INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1730-S.SNP.1:3384359 chr01:003384359 0 W/3384359-3384359 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.870467;DP=2998;DP4=1615,1332,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00133422;MQB=0.216515;MQSB=0.403963;RPB=0.87933;SGB=-38.278;VDB=0.98074;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.1:3384573 chr01:003384573 0 W/3384573-3384573 FN1213-S Single Base Substitution G-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN_398-1.SNP.1:3384573 chr01:003384573 0 W/3384573-3384573 FN_398-1 Single Base Substitution G-T INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN2739-S.SNP.1:3387815 chr01:003387815 0 W/3387815-3387815 FN2739-S SNP T -> A AC=2;AN=200;BQB=0.913198;DP=4713;DP4=2481,1969,38,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.8597e-26;MQSB=0.926537;RPB=0.666388;SGB=8.07072;VDB=0.65743;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E310D|552|LOC_Os01g07170|protein_coding|CODING|LOC_Os01g07170.1|7|1) FN1317-S.SNP.1:3390865 chr01:003390865 0 W/3390865-3390865 FN1317-S Single Base Substitution T-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN3943-S.SNP.1:3390912 chr01:003390912 0 W/3390912-3390912 FN3943-S SNP G -> A AC=1;AN=168;BQB=0.916293;DP=2591;DP4=1311,1071,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000238828;MQSB=0.999241;RPB=0.422796;SGB=27.8864;VDB=0.0961183;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN-131 Single Base Substitution G-A INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-182.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-72.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN-72 Single Base Substitution G-A INTERGENIC HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1035-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN1035-S Single Base Substitution G-A INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1645-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN1645-S Single Base Substitution G-A INTERGENIC Homo SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1718-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.127402;DP=3550;DP4=1631,1869,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0;MQB=0.143777;MQSB=0.0042181;RPB=0.144419;SGB=-93.8106;VDB=0.247062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.581945;DP=3710;DP4=1646,2014,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.000808625;MQB=0.428234;MQSB=0.000228609;RPB=0.947064;SGB=-41.7816;VDB=0.0259879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.996488;DP=4958;DP4=2227,2327,22,23;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.60941e-09;MQSB=0.00136923;RPB=0.134328;SGB=100.276;VDB=0.757644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN2553-S SNP G -> A AC=2;AN=198;BQB=0.976447;DP=4169;DP4=1899,1999,16,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=7.74711e-07;MQSB=0.0526607;RPB=0.773626;SGB=79.6954;VDB=0.627212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.605447;DP=2275;DP4=707,1483,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.060423;MQSB=0.00146863;RPB=0.591402;SGB=18.1394;VDB=0.198441;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN3527-S SNP G -> A AC=2;AN=188;BQB=0.304906;DP=2221;DP4=677,1468,8,7;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=0.0196094;MQSB=4.1772e-09;RPB=0.72535;SGB=62.6088;VDB=0.431731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN3769-S SNP G -> A AC=1;AN=190;BQB=0.986015;DP=2383;DP4=821,1447,2,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00210283;MQSB=0.00123081;RPB=0.925151;SGB=39.6545;VDB=0.58437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN3889-S SNP G -> A AC=2;AN=158;BQB=0.995558;DP=2073;DP4=723,1242,6,13;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=0.000349773;MQSB=0.0336192;RPB=0.787448;SGB=54.2901;VDB=0.728917;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN4039-S SNP G -> A AC=1;AN=168;BQB=0.167245;DP=2267;DP4=761,1412,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000441112;MQB=0.0469499;MQSB=0.000549362;RPB=0.758851;SGB=41.6096;VDB=0.981033;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN4074-S SNP G -> A AC=2;AN=182;BQB=0.771796;DP=2544;DP4=991,1455,9,15;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=4.88294e-05;MQSB=0.0314822;RPB=0.972306;SGB=45.7418;VDB=0.999614;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.986048;DP=2162;DP4=863,1213,6,11;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=0.000426431;MQSB=0.0177139;RPB=0.689123;SGB=48.6486;VDB=0.0528205;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN512-S Single Base Substitution G-A INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN711-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN711-S Single Base Substitution G-A INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN791-S.SNP.1:3393632 chr01:003393632 0 W/3393632-3393632 FN791-S Single Base Substitution G-A INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3743-S.SNP.1:3395083 chr01:003395083 0 W/3395083-3395083 FN3743-S SNP G -> A AC=1;AN=190;BQB=0.993508;DP=2007;DP4=863,1064,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000600996;MQSB=0.911731;RPB=0.799169;SGB=30.8803;VDB=0.107308;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.1:3399760 chr01:003399760 0 W/3399760-3399760 FN-198 Single Base Substitution A-G INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-133.SNP.1:3402195 chr01:003402195 0 W/3402195-3402195 FN-133 Single Base Substitution T-A INTRON HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN1310-S.SNP.1:3403977 chr01:003403977 0 W/3403977-3403977 FN1310-S Single Base Substitution A-C INTRON HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1268-S.SNP.1:3419336 chr01:003419336 0 W/3419336-3419336 FN1268-S Single Base Substitution G-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1028-S.SNP.1:3427352 chr01:003427352 0 W/3427352-3427352 FN1028-S Single Base Substitution A-G INTRON HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1394-S.SNP.1:3432736 chr01:003432736 0 W/3432736-3432736 FN1394-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1723-S.SNP.1:3438703 chr01:003438703 0 W/3438703-3438703 FN1723-S SNP T -> C AC=1;AN=188;BQB=0.000396324;DP=4456;DP4=2363,2051,17,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.23662e-11;MQSB=0.913096;RPB=0.956787;SGB=-7.93693;VDB=0.718438;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.1:3438734 chr01:003438734 0 W/3438734-3438734 FN1723-S SNP G -> T AC=1;AN=188;BQB=0.442542;DP=4276;DP4=2269,1946,20,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.95172e-13;MQSB=0.957907;RPB=0.776097;SGB=25.601;VDB=0.595777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.1:3441419 chr01:003441419 0 W/3441419-3441419 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.89337;DP=4022;DP4=1966,1888,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.45251e-13;MQSB=0.738735;RPB=0.951367;SGB=90.9049;VDB=0.189032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.1:3446501 chr01:003446501 0 W/3446501-3446501 FN3105-S SNP T -> C AC=1;AN=184;BQB=0.480411;DP=2956;DP4=1577,1272,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.33984e-08;MQSB=0.999687;RPB=0.358724;SGB=2.23696;VDB=0.705322;EFF=UTR_3_PRIME(MODIFIER||245||270|LOC_Os01g07300|protein_coding|CODING|LOC_Os01g07300.2|1|1),UTR_3_PRIME(MODIFIER||201||311|LOC_Os01g07300|protein_coding|CODING|LOC_Os01g07300.1|2|1) FN-97.SNP.1:3446843 chr01:003446843 0 W/3446843-3446843 FN-97 Single Base Substitution G-A INTERGENIC HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN4188-S.SNP.1:3460010 chr01:003460010 0 W/3460010-3460010 FN4188-S SNP T -> G AC=1;AN=170;BQB=0.0703182;DP=2330;DP4=1057,1196,7,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.64412e-08;MQSB=0.945088;RPB=0.851979;SGB=12.9884;VDB=0.491831;EFF=INTRON(MODIFIER||||820|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.1|9|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.2|9|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.3|9|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.4|10|1) FN2754-S.SNP.1:3462330 chr01:003462330 0 W/3462330-3462330 FN2754-S SNP A -> T AC=1;AN=200;BQB=0.988336;DP=4657;DP4=2185,2313,10,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.00024e-08;MQSB=0.918567;RPB=0.60855;SGB=16.4591;VDB=0.190012;EFF=SPLICE_SITE_REGION(LOW||||820|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.1|4|1),SPLICE_SITE_REGION(LOW||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.2|4|1),SPLICE_SITE_REGION(LOW||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.3|4|1),SPLICE_SITE_REGION(LOW||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.4|5|1),INTRON(MODIFIER||||820|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.1|4|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.2|4|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.3|4|1),INTRON(MODIFIER||||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.4|5|1) FN2483.SNP.1:3464411 chr01:003464411 0 W/3464411-3464411 FN2483 SNP C -> T AC=2;AN=200;BQB=0.505991;DP=4661;DP4=2273,2089,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000214546;MQB=1.25423e-14;MQSB=0.993433;RPB=0.499389;SGB=132.552;VDB=0.56362;EFF=UTR_5_PRIME(MODIFIER||1095||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.4|2|1),UTR_5_PRIME(MODIFIER||1095||820|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.1|1|1),UTR_5_PRIME(MODIFIER||1095||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.2|1|1),UTR_5_PRIME(MODIFIER||1095||778|LOC_Os01g07330|protein_coding|CODING|LOC_Os01g07330.3|1|1) FN3474-S.SNP.1:3467781 chr01:003467781 0 W/3467781-3467781 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.95596;DP=2928;DP4=1441,1379,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46422e-10;MQSB=0.264199;RPB=0.785919;SGB=38.4058;VDB=0.475667;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.1:3476666 chr01:003476666 0 W/3476666-3476666 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.587936;DP=2797;DP4=1355,1363,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.04237e-06;MQSB=1;RPB=0.304227;SGB=21.8853;VDB=0.682146;EFF=INTRON(MODIFIER||||432|LOC_Os01g07360|protein_coding|CODING|LOC_Os01g07360.1|1|1),INTRON(MODIFIER||||432|LOC_Os01g07360|protein_coding|CODING|LOC_Os01g07360.2|3|1),INTRON(MODIFIER||||432|LOC_Os01g07360|protein_coding|CODING|LOC_Os01g07360.3|2|1),INTRON(MODIFIER||||432|LOC_Os01g07360|protein_coding|CODING|LOC_Os01g07360.4|2|1) FN445-S.SNP.1:3484864 chr01:003484864 0 W/3484864-3484864 FN445-S Single Base Substitution A-C INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3295-S.SNP.1:3488451 chr01:003488451 0 W/3488451-3488451 FN3295-S SNP A -> T AC=1;AN=184;BQB=0.720998;DP=2882;DP4=1368,1403,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000230666;MQSB=0.989429;RPB=0.742179;SGB=18.1394;VDB=0.251998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.1:3493027 chr01:003493027 0 W/3493027-3493027 FN1124-S Single Base Substitution T-C INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN418-S.SNP.1:3497919 chr01:003497919 0 W/3497919-3497919 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3696-S.SNP.1:3498319 chr01:003498319 0 W/3498319-3498319 FN3696-S SNP A -> T AC=1;AN=190;BQB=0.815425;DP=3092;DP4=1703,1240,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79522e-09;MQSB=0.998811;RPB=0.150454;SGB=8.77275;VDB=0.480731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:3503732 chr01:003503732 0 W/3503732-3503732 FN3815-S SNP C -> T AC=1;AN=190;BQB=0.846244;DP=2536;DP4=1267,1173,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000394322;MQB=5.63873e-10;MQSB=0.961276;RPB=0.999055;SGB=62.7569;VDB=0.249542;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y321|427|LOC_Os01g07390|protein_coding|CODING|LOC_Os01g07390.1|5|1) FN3815-S.SNP.1:3503750 chr01:003503750 0 W/3503750-3503750 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.95154;DP=2535;DP4=1261,1177,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000394477;MQB=3.70698e-11;MQSB=0.989324;RPB=0.783315;SGB=50.3161;VDB=0.456465;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T327|427|LOC_Os01g07390|protein_coding|CODING|LOC_Os01g07390.1|5|1) FN3852-S.SNP.1:3508465 chr01:003508465 0 W/3508465-3508465 FN3852-S SNP G -> T AC=1;AN=158;BQB=0.655014;DP=2434;DP4=1210,1170,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000550513;MQSB=0.995191;RPB=0.949491;SGB=33.9591;VDB=0.353119;EFF=INTRON(MODIFIER||||417|LOC_Os01g07400|protein_coding|CODING|LOC_Os01g07400.1|3|1),INTRON(MODIFIER||||417|LOC_Os01g07400|protein_coding|CODING|LOC_Os01g07400.2|3|1) FN1650-S.SNP.1:3512294 chr01:003512294 0 W/3512294-3512294 FN1650-S Single Base Substitution A-G INTRON HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2340.SNP.1:3519958 chr01:003519958 0 W/3519958-3519958 FN2340 SNP T -> C AC=1;AN=192;BQB=0.0609489;DP=5125;DP4=2468,2370,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000123784;MQSB=0.637402;RPB=0.446441;SGB=16.0922;VDB=0.806125;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.1:3541615 chr01:003541615 0 W/3541615-3541615 FN480-S Single Base Substitution G-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN985-S.SNP.1:3544382 chr01:003544382 0 W/3544382-3544382 FN985-S Single Base Substitution T-A INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN687-S.SNP.1:3545911 chr01:003545911 0 W/3545911-3545911 FN687-S Single Base Substitution A-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN915-S.SNP.1:3546018 chr01:003546018 0 W/3546018-3546018 FN915-S Single Base Substitution G-T INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2637-S.SNP.1:3547624 chr01:003547624 0 W/3547624-3547624 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.437233;DP=4912;DP4=2358,2354,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65896e-12;MQSB=0.936332;RPB=0.999279;SGB=109.527;VDB=0.645962;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.1:3550238 chr01:003550238 0 W/3550238-3550238 FN883-S Single Base Substitution A-T INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN883-S.SNP.1:3550239 chr01:003550239 0 W/3550239-3550239 FN883-S Single Base Substitution A-T INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1086-S.SNP.1:3555044 chr01:003555044 0 W/3555044-3555044 FN1086-S Single Base Substitution A-G INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3937-S.SNP.1:3568384 chr01:003568384 0 W/3568384-3568384 FN3937-S SNP T -> G AC=2;AN=158;BQB=0.771736;DP=2497;DP4=1085,1347,6,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.33996e-08;MQSB=0.894761;RPB=0.114269;SGB=4.82504;VDB=0.0584472;EFF=INTRON(MODIFIER||||1842|LOC_Os01g07490|protein_coding|CODING|LOC_Os01g07490.1|10|1) FN2358.SNP.1:3569001 chr01:003569001 0 W/3569001-3569001 FN2358 SNP T -> C AC=1;AN=192;BQB=0.516141;DP=4906;DP4=2620,1990,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.41715e-10;MQSB=0.982066;RPB=0.749373;SGB=10.4835;VDB=0.247169;EFF=INTRON(MODIFIER||||1842|LOC_Os01g07490|protein_coding|CODING|LOC_Os01g07490.1|8|1) FN4103-S.SNP.1:3569964 chr01:003569964 0 W/3569964-3569964 FN4103-S SNP C -> T AC=1;AN=182;BQB=0.170566;DP=2678;DP4=1317,1272,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.20742e-05;MQSB=0.995891;RPB=0.351939;SGB=15.6115;VDB=0.622197;EFF=SPLICE_SITE_DONOR(HIGH||||1842|LOC_Os01g07490|protein_coding|CODING|LOC_Os01g07490.1|7|1),INTRON(MODIFIER||||1842|LOC_Os01g07490|protein_coding|CODING|LOC_Os01g07490.1|7|1);LOF=(LOC_Os01g07490|LOC_Os01g07490|1|1.00) FN4128-S.SNP.1:3574930 chr01:003574930 0 W/3574930-3574930 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.945193;DP=2336;DP4=1200,1048,5,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.03995e-05;MQSB=0.756296;RPB=0.362585;SGB=26.0691;VDB=0.456334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.1:3577278 chr01:003577278 0 W/3577278-3577278 FN3896-S SNP T -> A AC=2;AN=158;BQB=0.948974;DP=2671;DP4=1083,1435,8,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.05796e-14;MQSB=0.905407;RPB=0.971606;SGB=116.978;VDB=0.282789;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.1:3579598 chr01:003579598 0 W/3579598-3579598 FN373-S Single Base Substitution C-T INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN817-S.SNP.1:3585995 chr01:003585995 0 W/3585995-3585995 FN817-S Single Base Substitution C-T INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN-108.SNP.1:3588347 chr01:003588347 0 W/3588347-3588347 FN-108 Single Base Substitution A-G INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3950-S.SNP.1:3597388 chr01:003597388 0 W/3597388-3597388 FN3950-S SNP G -> C AC=1;AN=168;BQB=0.961475;DP=2842;DP4=1558,1141,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.13954e-12;MQSB=0.994502;RPB=0.902257;SGB=83.1885;VDB=0.38854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.1:3599698 chr01:003599698 0 W/3599698-3599698 FN2675-S SNP C -> T AC=2;AN=200;BQB=0.639286;DP=4574;DP4=2148,2150,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.12138e-23;MQSB=0.795018;RPB=0.788315;SGB=86.7987;VDB=0.692278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G493R|840|LOC_Os01g07530|protein_coding|CODING|LOC_Os01g07530.1|2|1) FN2321.SNP.1:3619462 chr01:003619462 0 W/3619462-3619462 FN2321 SNP G -> A AC=2;AN=192;BQB=0.999601;DP=4921;DP4=2370,2189,27,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.87275e-27;MQSB=0.999842;RPB=0.821164;SGB=-110.442;VDB=0.247;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.1:3624519 chr01:003624519 0 W/3624519-3624519 FN910-S Single Base Substitution T-G INTRON HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3923-S.SNP.1:3626284 chr01:003626284 0 W/3626284-3626284 FN3923-S SNP C -> T AC=2;AN=158;BQB=0.71391;DP=2918;DP4=1340,1453,11,20;HOB=0.024996;ICB=0.493752;MQ=30;MQ0F=0.158328;MQB=0.821749;MQSB=0;RPB=0.236154;SGB=130.087;VDB=0.0502933;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.1:3628880 chr01:003628880 0 W/3628880-3628880 FN418-S Single Base Substitution G-C INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN984-S.SNP.1:3635653 chr01:003635653 0 W/3635653-3635653 FN984-S Single Base Substitution A-T INTRON HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN743-S.SNP.1:3642558 chr01:003642558 0 W/3642558-3642558 FN743-S Single Base Substitution A-C INTERGENIC HOMO SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2781-S.SNP.1:3654108 chr01:003654108 0 W/3654108-3654108 FN2781-S SNP T -> C AC=2;AN=198;BQB=0.924097;DP=4221;DP4=2023,1958,28,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000473821;MQB=5.65137e-29;MQSB=0.797939;RPB=0.260981;SGB=109.793;VDB=0.445103;EFF=INTRON(MODIFIER||||404|LOC_Os01g07600|protein_coding|CODING|LOC_Os01g07600.1|3|1) FN2739-S.SNP.1:3655391 chr01:003655391 0 W/3655391-3655391 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.688881;DP=4858;DP4=2293,2273,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.65795e-13;MQSB=0.83208;RPB=0.867172;SGB=69.1109;VDB=0.883233;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W305*|404|LOC_Os01g07600|protein_coding|CODING|LOC_Os01g07600.1|5|1);LOF=(LOC_Os01g07600|LOC_Os01g07600|1|1.00);NMD=(LOC_Os01g07600|LOC_Os01g07600|1|1.00) FN492-S.SNP.1:3659044 chr01:003659044 0 W/3659044-3659044 FN492-S Single Base Substitution C-T INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2564-S.SNP.1:3659418 chr01:003659418 0 W/3659418-3659418 FN2564-S SNP A -> G AC=1;AN=198;BQB=0.939236;DP=4671;DP4=2103,2314,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.0001e-06;MQSB=0.960527;RPB=0.946863;SGB=22.1736;VDB=0.397591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.1:3664615 chr01:003664615 0 W/3664615-3664615 FN2438 SNP A -> T AC=1;AN=200;BQB=0.48903;DP=5077;DP4=2369,2292,22,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.32624e-17;MQSB=0.999779;RPB=0.984567;SGB=-2.21717;VDB=0.851324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.1:3670591 chr01:003670591 0 W/3670591-3670591 FN3570-S SNP G -> C AC=1;AN=190;BQB=0.922668;DP=2963;DP4=1217,1633,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.83055e-05;MQSB=0.996906;RPB=0.968605;SGB=21.8853;VDB=0.505656;EFF=INTRON(MODIFIER||||628|LOC_Os01g07630|protein_coding|CODING|LOC_Os01g07630.1|8|1) FN-252.SNP.1:3676987 chr01:003676987 0 W/3676987-3676987 FN-252 Single Base Substitution A-G INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-252.SNP.1:3676988 chr01:003676988 0 W/3676988-3676988 FN-252 Single Base Substitution G-A INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN3979-S.SNP.1:3680547 chr01:003680547 0 W/3680547-3680547 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.88803;DP=2312;DP4=1041,1165,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.3071e-12;MQSB=0.971976;RPB=0.809562;SGB=58.7637;VDB=0.871941;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H38|535|LOC_Os01g07640|protein_coding|CODING|LOC_Os01g07640.1|1|1) FN3979-S.SNP.1:3680548 chr01:003680548 0 W/3680548-3680548 FN3979-S SNP T -> A AC=1;AN=168;BQB=0.995692;DP=2308;DP4=1015,1096,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35631e-12;MQSB=0.949666;RPB=0.927425;SGB=78.7577;VDB=0.807779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H38L|535|LOC_Os01g07640|protein_coding|CODING|LOC_Os01g07640.1|1|1) FN503-S.SNP.1:3688320 chr01:003688320 0 W/3688320-3688320 FN503-S Single Base Substitution G-T INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN4117-S.SNP.1:3689172 chr01:003689172 0 W/3689172-3689172 FN4117-S SNP G -> T AC=1;AN=182;BQB=0.890019;DP=2488;DP4=1104,1306,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.19696e-09;MQSB=0.913426;RPB=0.988704;SGB=62.1548;VDB=0.452471;EFF=INTERGENIC(MODIFIER||||||||||1) 701-3.SNP.1:3691205 chr01:003691205 0 W/3691205-3691205 701-3 Single Base Substitution T-A INTRON HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN-197.SNP.1:3701087 chr01:003701087 0 W/3701087-3701087 FN-197 Single Base Substitution T-C INTERGENIC HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-236.SNP.1:3710256 chr01:003710256 0 W/3710256-3710256 FN-236 Single Base Substitution T-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2485.SNP.1:3719129 chr01:003719129 0 W/3719129-3719129 FN2485 SNP A -> G AC=1;AN=200;BQB=0.583158;DP=4583;DP4=2178,2135,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.80768e-14;MQSB=0.820051;RPB=0.350485;SGB=76.3213;VDB=0.579211;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.1:3724224 chr01:003724224 0 W/3724224-3724224 FN884-S Single Base Substitution C-T INTERGENIC HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN_543-2-6.SNP.1:3724224 chr01:003724224 0 W/3724224-3724224 FN_543-2-6 Single Base Substitution C-T Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN_846-8-1.SNP.1:3724687 chr01:003724687 0 W/3724687-3724687 FN_846-8-1 Single Base Substitution C-T HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2451.SNP.1:3724719 chr01:003724719 0 W/3724719-3724719 FN2451 SNP T -> A AC=1;AN=200;BQB=0.160534;DP=4782;DP4=2098,2397,17,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.82907e-20;MQSB=0.959441;RPB=0.997926;SGB=130.399;VDB=0.640442;EFF=UTR_3_PRIME(MODIFIER||264||812|LOC_Os01g07760|protein_coding|CODING|LOC_Os01g07760.1|4|1),UTR_3_PRIME(MODIFIER||264||812|LOC_Os01g07760|protein_coding|CODING|LOC_Os01g07760.2|3|1) FN4272-S.SNP.1:3730190 chr01:003730190 0 W/3730190-3730190 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.687324;DP=2342;DP4=1146,1123,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07421e-05;MQSB=0.990121;RPB=0.998986;SGB=47.8722;VDB=0.931032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.1:3732433 chr01:003732433 0 W/3732433-3732433 FN2549-S SNP C -> G AC=1;AN=198;BQB=0.795744;DP=4215;DP4=2124,1861,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000237248;MQB=4.85788e-05;MQSB=0.767565;RPB=0.885375;SGB=13.7737;VDB=0.851111;EFF=INTRON(MODIFIER||||319|LOC_Os01g07770|protein_coding|CODING|LOC_Os01g07770.1|1|1) FN404-S.SNP.1:3733798 chr01:003733798 0 W/3733798-3733798 FN404-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1184-S.SNP.1:3759885 chr01:003759885 0 W/3759885-3759885 FN1184-S Single Base Substitution T-C INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3883-S.SNP.1:3761585 chr01:003761585 0 W/3761585-3761585 FN3883-S SNP C -> A AC=1;AN=158;BQB=0.667782;DP=1142;DP4=452,597,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000502873;MQSB=0.0301944;RPB=0.813602;SGB=4.86351;VDB=0.934408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.1:3763965 chr01:003763965 0 W/3763965-3763965 FN1301-S Single Base Substitution G-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN473-S.SNP.1:3765329 chr01:003765329 0 W/3765329-3765329 FN473-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g07840 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1697-S.SNP.1:3766090 chr01:003766090 0 W/3766090-3766090 FN1697-S SNP A -> G AC=1;AN=188;BQB=0.161658;DP=2881;DP4=1647,1200,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0104131;MQB=2.7598e-06;MQSB=0.103208;RPB=0.733296;SGB=-14.4565;VDB=0.449312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D471G|1941|LOC_Os01g07840|protein_coding|CODING|LOC_Os01g07840.1|2|1) FN4151-S.SNP.1:3769537 chr01:003769537 0 W/3769537-3769537 FN4151-S SNP G -> T AC=1;AN=170;BQB=0.561799;DP=2007;DP4=606,1344,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0149477;MQB=0.268466;MQSB=0.898404;RPB=1;SGB=24.5502;VDB=0.309361;EFF=INTRON(MODIFIER||||1941|LOC_Os01g07840|protein_coding|CODING|LOC_Os01g07840.1|4|1) FN890-S.SNP.1:3770057 chr01:003770057 0 W/3770057-3770057 FN890-S Single Base Substitution G-A INTRON HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2403.SNP.1:3770791 chr01:003770791 0 W/3770791-3770791 FN2403 SNP C -> T AC=1;AN=200;BQB=0.259695;DP=4059;DP4=1927,1843,8,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00418822;MQB=6.30296e-07;MQSB=0.938872;RPB=0.117618;SGB=7.88476;VDB=0.144494;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H1049|1941|LOC_Os01g07840|protein_coding|CODING|LOC_Os01g07840.1|6|1) FN507-S.SNP.1:3772026 chr01:003772026 0 W/3772026-3772026 FN507-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g07840 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-206.SNP.1:3780922 chr01:003780922 0 W/3780922-3780922 FN-206 Single Base Substitution C-A INTRON HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-400.SNP.1:3781995 chr01:003781995 0 W/3781995-3781995 FN-400 Single Base Substitution C-A UTR_3_PRIME HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN4011-S.SNP.1:3782112 chr01:003782112 0 W/3782112-3782112 FN4011-S SNP A -> T AC=1;AN=168;BQB=0.177187;DP=2386;DP4=1315,891,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000563579;MQSB=0.339975;RPB=0.999644;SGB=12.4615;VDB=0.214515;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.1:3782531 chr01:003782531 0 W/3782531-3782531 FN782-S Single Base Substitution G-A INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN2083-S.SNP.1:3784148 chr01:003784148 0 W/3784148-3784148 FN2083-S SNP T -> G AC=1;AN=168;BQB=0.398377;DP=2786;DP4=1113,1473,86,71;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00430725;MQB=0;MQSB=0.574935;RPB=3.23496e-05;SGB=-1524.97;VDB=3.83661e-20;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D673A|824|LOC_Os01g07860|protein_coding|CODING|LOC_Os01g07860.1|2|1) 702-2-1.SNP.1:3786991 chr01:003786991 0 W/3786991-3786991 702-2-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1444, Mutant_ID: 702-2-1, Generation: M2, Mutations: 28, Genes: 16, Seed availability: No. FN-129.SNP.1:3793333 chr01:003793333 0 W/3793333-3793333 FN-129 Single Base Substitution A-C INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-232.SNP.1:3793586 chr01:003793586 0 W/3793586-3793586 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2165-S.SNP.1:3793982 chr01:003793982 0 W/3793982-3793982 FN2165-S SNP C -> T AC=1;AN=168;BQB=0.569341;DP=1454;DP4=605,788,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0667125;MQB=0.607824;MQSB=0.0287417;RPB=0.715377;SGB=2.75988;VDB=0.157895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.1:3802825 chr01:003802825 0 W/3802825-3802825 FN2362 SNP A -> T AC=2;AN=192;BQB=0.0152071;DP=5264;DP4=2194,2752,15,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00018997;MQB=1.54057e-20;MQSB=0.949308;RPB=0.97521;SGB=149.626;VDB=0.734239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.1:3803793 chr01:003803793 0 W/3803793-3803793 FN1252-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2583-S.SNP.1:3804015 chr01:003804015 0 W/3804015-3804015 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.950494;DP=4861;DP4=2238,2365,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54569e-12;MQSB=0.882837;RPB=0.914881;SGB=72.7161;VDB=0.671082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.1:3807514 chr01:003807514 0 W/3807514-3807514 FN3856-S SNP A -> T AC=1;AN=158;BQB=0.993719;DP=2306;DP4=1060,1153,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.46093e-06;MQSB=0.920783;RPB=0.976783;SGB=27.3346;VDB=0.93032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I870L|1505|LOC_Os01g07870|protein_coding|CODING|LOC_Os01g07870.1|3|1) FN-397.SNP.1:3810264 chr01:003810264 0 W/3810264-3810264 FN-397 Single Base Substitution C-T UTR_3_PRIME HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1420-S.SNP.1:3811421 chr01:003811421 0 W/3811421-3811421 FN1420-S Single Base Substitution C-T INTRON HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3707-S.SNP.1:3834468 chr01:003834468 0 W/3834468-3834468 FN3707-S SNP G -> T AC=1;AN=190;BQB=0.577773;DP=3091;DP4=1536,1429,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.0774e-06;MQSB=0.997709;RPB=0.582392;SGB=58.2031;VDB=0.860322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1285-S.SNP.1:3860974 chr01:003860974 0 W/3860974-3860974 FN1285-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g07980 ankyrin, putative, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2742-S.SNP.1:3863237 chr01:003863237 0 W/3863237-3863237 FN2742-S SNP C -> G AC=2;AN=200;BQB=0.933216;DP=3059;DP4=1633,1233,13,12;HOB=0.0198;ICB=0.495051;MQ=15;MQ0F=0.440667;MQB=0.378112;MQSB=0;RPB=0.396792;SGB=79.9264;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) W706-3-1.SNP.1:3877972 chr01:003877972 0 W/3877972-3877972 W706-3-1 Single Base Substitution C-A INTRON HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN1261-S.SNP.1:3885172 chr01:003885172 0 W/3885172-3885172 FN1261-S Single Base Substitution C-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3529-S.SNP.1:3886657 chr01:003886657 0 W/3886657-3886657 FN3529-S SNP A -> G AC=2;AN=188;BQB=0.939042;DP=2821;DP4=1440,1277,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.24865e-11;MQSB=0.952969;RPB=0.985548;SGB=57.244;VDB=0.467038;EFF=INTRON(MODIFIER||||672|LOC_Os01g08020|protein_coding|CODING|LOC_Os01g08020.1|10|1) FN-149.SNP.1:3887778 chr01:003887778 0 W/3887778-3887778 FN-149 Single Base Substitution T-C INTRON HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2721-S.SNP.1:3892732 chr01:003892732 0 W/3892732-3892732 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.98963;DP=4626;DP4=2385,2033,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.27594e-11;MQSB=0.996124;RPB=0.387186;SGB=11.0951;VDB=0.110041;EFF=INTRON(MODIFIER||||672|LOC_Os01g08020|protein_coding|CODING|LOC_Os01g08020.1|10|1) FN1536-S.SNP.1:3900084 chr01:003900084 0 W/3900084-3900084 FN1536-S Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2499.SNP.1:3900084 chr01:003900084 0 W/3900084-3900084 FN2499 SNP G -> A AC=1;AN=200;BQB=0.789963;DP=3705;DP4=1410,2003,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05132e-07;MQSB=0.82488;RPB=0.761773;SGB=3.06925;VDB=0.78371;EFF=UTR_5_PRIME(MODIFIER||1355||672|LOC_Os01g08020|protein_coding|CODING|LOC_Os01g08020.1|1|1) FN1215-S.SNP.1:3902480 chr01:003902480 0 W/3902480-3902480 FN1215-S Single Base Substitution G-A INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1170-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN1170-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1441-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN1441-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1762-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN1762-S SNP T -> A AC=1;AN=188;BQB=2.87376e-05;DP=1635;DP4=844,744,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.02263;MQB=0.000315874;MQSB=4.87273e-07;RPB=0.3329;SGB=-238.957;VDB=0.997085;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN2233-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN2233-S SNP T -> A AC=1;AN=190;BQB=2.69984e-11;DP=3998;DP4=1742,1611,27,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00475238;MQB=1.76363e-13;MQSB=0.00012356;RPB=0.000165616;SGB=-559.907;VDB=0.999965;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN2408.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN2408 SNP T -> A AC=2;AN=200;BQB=3.08976e-06;DP=4101;DP4=1922,1674,44,17;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.0034138;MQB=9.05503e-29;MQSB=0.716119;RPB=1.55788e-09;SGB=-562.426;VDB=0.883994;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN2545-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN2545-S SNP T -> A AC=2;AN=198;BQB=4.54043e-06;DP=3889;DP4=1862,1684,34,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.0043713;MQB=8.11625e-21;MQSB=0.037802;RPB=0.128842;SGB=-477.102;VDB=1;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN3464-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN3464-S SNP T -> A AC=2;AN=184;BQB=2.70063e-06;DP=3042;DP4=1659,1247,34,8;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00361604;MQB=1.14957e-21;MQSB=0.275047;RPB=0.00031844;SGB=-606.382;VDB=0.991977;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN3575-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN3575-S SNP T -> A AC=1;AN=188;BQB=0.000183208;DP=2893;DP4=1555,1196,28,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00414794;MQB=8.07021e-20;MQSB=0.049498;RPB=1.18279e-05;SGB=-543.584;VDB=0.939864;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN3845-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN3845-S SNP T -> A AC=2;AN=188;BQB=6.02075e-05;DP=2793;DP4=1534,1117,41,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00608665;MQB=5.88525e-31;MQSB=0.137308;RPB=5.65998e-05;SGB=-303.112;VDB=0.99699;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN3902-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN3902-S SNP T -> A AC=2;AN=158;BQB=0.00823207;DP=2451;DP4=1354,971,31,12;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00530396;MQB=9.99788e-21;MQSB=0.365237;RPB=0.00209393;SGB=-480.563;VDB=0.992366;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN3958-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN3958-S SNP T -> A AC=1;AN=168;BQB=5.74556e-08;DP=2709;DP4=1457,1117,25,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00406054;MQB=1.5564e-18;MQSB=0.327969;RPB=1.44261e-09;SGB=-546.427;VDB=0.00477244;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN4093-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN4093-S SNP T -> A AC=1;AN=182;BQB=1.49564e-06;DP=3058;DP4=1589,1359,24,8;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.0029431;MQB=2.50534e-19;MQSB=0.241119;RPB=9.17091e-09;SGB=-481.752;VDB=0.142183;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P78|507|LOC_Os01g08070|protein_coding|CODING|LOC_Os01g08070.1|2|1) FN429-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN429-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN457-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN457-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN776-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN776-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN942-S.SNP.1:3905569 chr01:003905569 0 W/3905569-3905569 FN942-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN_789-3-1.SNP.1:3907913 chr01:003907913 0 W/3907913-3907913 FN_789-3-1 Single Base Substitution A-G INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN593-S.SNP.1:3911288 chr01:003911288 0 W/3911288-3911288 FN593-S Single Base Substitution G-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN923-S.SNP.1:3916140 chr01:003916140 0 W/3916140-3916140 FN923-S Single Base Substitution C-G INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN1662-S.SNP.1:3936444 chr01:003936444 0 W/3936444-3936444 FN1662-S Single Base Substitution C-T INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2082-S.SNP.1:3938259 chr01:003938259 0 W/3938259-3938259 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.150123;DP=2280;DP4=920,1306,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35769e-07;MQSB=0.31582;RPB=0.995565;SGB=11.3448;VDB=0.990522;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T11|197|LOC_Os01g08140|protein_coding|CODING|LOC_Os01g08140.1|2|1) FN2304.SNP.1:3941299 chr01:003941299 0 W/3941299-3941299 FN2304 SNP C -> G AC=1;AN=192;BQB=0.998411;DP=4745;DP4=2552,1867,24,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.20144e-24;MQSB=0.969429;RPB=0.898399;SGB=-46.6547;VDB=0.936733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A262P|832|LOC_Os01g08150|protein_coding|CODING|LOC_Os01g08150.1|4|1),SPLICE_SITE_REGION(LOW||||832|LOC_Os01g08150|protein_coding|CODING|LOC_Os01g08150.1|4|1) FN2304.SNP.1:3941300 chr01:003941300 0 W/3941300-3941300 FN2304 SNP A -> T AC=1;AN=192;BQB=0.0610482;DP=4764;DP4=2618,1859,18,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.82274e-21;MQSB=0.918951;RPB=0.975974;SGB=75.0722;VDB=0.878899;EFF=SPLICE_SITE_REGION(LOW||||832|LOC_Os01g08150|protein_coding|CODING|LOC_Os01g08150.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I261|832|LOC_Os01g08150|protein_coding|CODING|LOC_Os01g08150.1|4|1) FN4010-S.SNP.1:3941441 chr01:003941441 0 W/3941441-3941441 FN4010-S SNP G -> A AC=1;AN=168;BQB=0.729029;DP=2524;DP4=1318,1125,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.73083e-05;MQSB=0.986742;RPB=0.656347;SGB=21.0249;VDB=0.0179652;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H214|832|LOC_Os01g08150|protein_coding|CODING|LOC_Os01g08150.1|4|1) FN955-S.SNP.1:3947511 chr01:003947511 0 W/3947511-3947511 FN955-S Single Base Substitution T-G INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN2421.SNP.1:3952856 chr01:003952856 0 W/3952856-3952856 FN2421 SNP C -> T AC=1;AN=200;BQB=0.88733;DP=4375;DP4=2393,1748,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96849e-11;MQSB=0.985948;RPB=0.0495469;SGB=54.6902;VDB=0.0347892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.1:3955712 chr01:003955712 0 W/3955712-3955712 FN2278-S SNP A -> T AC=1;AN=190;BQB=0.621333;DP=5087;DP4=2302,2023,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=7.3535e-13;MQSB=3.33548e-05;RPB=0.25346;SGB=19.6499;VDB=0.467863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.1:3959331 chr01:003959331 0 W/3959331-3959331 FN1295-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g08170 expressed protein SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1512-S.SNP.1:3960712 chr01:003960712 0 W/3960712-3960712 FN1512-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1661-S.SNP.1:3963260 chr01:003963260 0 W/3963260-3963260 FN1661-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN728-S.SNP.1:3963833 chr01:003963833 0 W/3963833-3963833 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN728-S.SNP.1:3963834 chr01:003963834 0 W/3963834-3963834 FN728-S Single Base Substitution T-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN728-S.SNP.1:3963836 chr01:003963836 0 W/3963836-3963836 FN728-S Single Base Substitution G-C INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN-68.SNP.1:3964478 chr01:003964478 0 W/3964478-3964478 FN-68 Single Base Substitution A-C INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2304.SNP.1:3964509 chr01:003964509 0 W/3964509-3964509 FN2304 SNP A -> G AC=1;AN=192;BQB=0.653247;DP=3923;DP4=1373,2378,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.80994e-05;MQSB=0.965768;RPB=0.203546;SGB=32.6514;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.1:3966127 chr01:003966127 0 W/3966127-3966127 FN3420-S SNP T -> A AC=1;AN=184;BQB=0.577687;DP=2801;DP4=1609,1011,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01673e-05;MQSB=0.417425;RPB=0.740919;SGB=8.14452;VDB=0.0491808;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.1:3967795 chr01:003967795 0 W/3967795-3967795 FN1512-S Single Base Substitution C-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1529-S.SNP.1:3970267 chr01:003970267 0 W/3970267-3970267 FN1529-S Single Base Substitution C-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2774-S.SNP.1:3970645 chr01:003970645 0 W/3970645-3970645 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.815127;DP=4076;DP4=1522,2329,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.90841e-09;MQSB=0.19971;RPB=0.966452;SGB=79.6954;VDB=0.934958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.1:3972419 chr01:003972419 0 W/3972419-3972419 FN1205-S Single Base Substitution G-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN813-S.SNP.1:3973512 chr01:003973512 0 W/3973512-3973512 FN813-S Single Base Substitution C-T INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1048-S.SNP.1:3976504 chr01:003976504 0 W/3976504-3976504 FN1048-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g08190 transcriptional corepressor LEUNIG, putative, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN-124.SNP.1:3986435 chr01:003986435 0 W/3986435-3986435 FN-124 Single Base Substitution T-C INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN695-S.SNP.1:3986488 chr01:003986488 0 W/3986488-3986488 FN695-S Single Base Substitution G-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2353.SNP.1:3986566 chr01:003986566 0 W/3986566-3986566 FN2353 SNP C -> G AC=1;AN=192;BQB=0.0285021;DP=4063;DP4=1981,1895,14,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.96737e-10;MQSB=3.6068e-06;RPB=0.937576;SGB=36.607;VDB=0.596475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.1:3992814 chr01:003992814 0 W/3992814-3992814 FN2549-S SNP T -> G AC=1;AN=198;BQB=0.54918;DP=4155;DP4=1840,2082,2,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000452906;MQSB=0.875182;RPB=0.150991;SGB=18.5788;VDB=0.403377;EFF=INTRON(MODIFIER||||794|LOC_Os01g08200|protein_coding|CODING|LOC_Os01g08200.1|14|1) FN2549-S.SNP.1:3993093 chr01:003993093 0 W/3993093-3993093 FN2549-S SNP C -> A AC=1;AN=198;BQB=0.979501;DP=3986;DP4=1975,1814,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.87062e-07;MQSB=0.991493;RPB=0.963985;SGB=32.9588;VDB=0.598947;EFF=INTRON(MODIFIER||||794|LOC_Os01g08200|protein_coding|CODING|LOC_Os01g08200.1|14|1) FN470-S.SNP.1:3993776 chr01:003993776 0 W/3993776-3993776 FN470-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3821-S.SNP.1:4003673 chr01:004003673 0 W/4003673-4003673 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.69041;DP=2859;DP4=1373,1217,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000349773;MQB=6.86632e-15;MQSB=0.849196;RPB=0.897468;SGB=56.8601;VDB=0.589191;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D370N|373|LOC_Os01g08220|protein_coding|CODING|LOC_Os01g08220.1|2|1) FN1205-S.SNP.1:4013734 chr01:004013734 0 W/4013734-4013734 FN1205-S Single Base Substitution C-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3676-S.SNP.1:4021388 chr01:004021388 0 W/4021388-4021388 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.9419;DP=2977;DP4=1751,1048,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23215e-05;MQSB=0.976948;RPB=0.289144;SGB=30.8803;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.1:4022291 chr01:004022291 0 W/4022291-4022291 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.990312;DP=4648;DP4=2391,2070,17,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.04539e-13;MQSB=0.999931;RPB=0.746657;SGB=69.1109;VDB=0.845517;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.1:4027355 chr01:004027355 0 W/4027355-4027355 FN985-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g08250 retrotransposon protein, putative, unclassified, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3591-S.SNP.1:4029341 chr01:004029341 0 W/4029341-4029341 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.869459;DP=2612;DP4=1285,1264,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.92533e-08;MQSB=0.922809;RPB=0.759305;SGB=26.0762;VDB=0.653247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G417R|1662|LOC_Os01g08250|protein_coding|CODING|LOC_Os01g08250.1|1|1) FN2117-S.SNP.1:4030593 chr01:004030593 0 W/4030593-4030593 FN2117-S SNP G -> T AC=1;AN=168;BQB=0.146007;DP=2805;DP4=1330,1437,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50476e-08;MQSB=0.989135;RPB=0.58028;SGB=-66.4989;VDB=0.793388;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.1:4040485 chr01:004040485 0 W/4040485-4040485 FN856-S Single Base Substitution A-G INTERGENIC HOMO SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN_789-3-1.SNP.1:4041249 chr01:004041249 0 W/4041249-4041249 FN_789-3-1 Single Base Substitution A-G INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN3362-S.SNP.1:4045129 chr01:004045129 0 W/4045129-4045129 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.917872;DP=3010;DP4=1368,1521,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.66113e-11;MQSB=0.961029;RPB=0.788323;SGB=71.3514;VDB=0.150507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.1:4046352 chr01:004046352 0 W/4046352-4046352 FN1254-S Single Base Substitution A-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN555-S.SNP.1:4050526 chr01:004050526 0 W/4050526-4050526 FN555-S Single Base Substitution T-G INTERGENIC HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2136-S.SNP.1:4055625 chr01:004055625 0 W/4055625-4055625 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.32917;DP=3993;DP4=1886,2049,17,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.99313e-15;MQSB=0.946707;RPB=0.839118;SGB=-162.179;VDB=0.453106;EFF=INTRON(MODIFIER||||394|LOC_Os01g08270|protein_coding|CODING|LOC_Os01g08270.1|4|1),INTRON(MODIFIER||||208|LOC_Os01g08270|protein_coding|CODING|LOC_Os01g08270.4|4|1) FN518-S.SNP.1:4057814 chr01:004057814 0 W/4057814-4057814 FN518-S Single Base Substitution A-G INTERGENIC HOMO SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN1486-S.SNP.1:4064264 chr01:004064264 0 W/4064264-4064264 FN1486-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN3415-S.SNP.1:4077819 chr01:004077819 0 W/4077819-4077819 FN3415-S SNP T -> A AC=2;AN=184;BQB=0.96509;DP=2686;DP4=1312,1306,8,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000372301;MQB=6.03512e-08;MQSB=0.984718;RPB=0.975429;SGB=46.3132;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.1:4084447 chr01:004084447 0 W/4084447-4084447 FN824-S Single Base Substitution C-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1665-S.SNP.1:4088199 chr01:004088199 0 W/4088199-4088199 FN1665-S Single Base Substitution T-C INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN_552-1-1.SNP.1:4090439 chr01:004090439 0 W/4090439-4090439 FN_552-1-1 Single Base Substitution C-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN373-S.SNP.1:4091770 chr01:004091770 0 W/4091770-4091770 FN373-S Single Base Substitution T-C INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN4272-S.SNP.1:4099654 chr01:004099654 0 W/4099654-4099654 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.461295;DP=2332;DP4=751,1527,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.63347e-06;MQSB=0.859547;RPB=0.894153;SGB=52.3148;VDB=0.868837;EFF=INTRON(MODIFIER||||118|LOC_Os01g08360|protein_coding|CODING|LOC_Os01g08360.1|1|1) FN-166.SNP.1:4102146 chr01:004102146 0 W/4102146-4102146 FN-166 Single Base Substitution T-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-236.SNP.1:4102379 chr01:004102379 0 W/4102379-4102379 FN-236 Single Base Substitution G-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. W278-3-1.SNP.1:4110345 chr01:004110345 0 W/4110345-4110345 W278-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2266-S.SNP.1:4110869 chr01:004110869 0 W/4110869-4110869 FN2266-S SNP C -> T AC=2;AN=190;BQB=0.922446;DP=3785;DP4=1656,1720,18,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.10396e-12;MQSB=0.149798;RPB=0.0976809;SGB=121.957;VDB=0.522924;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E379K|437|LOC_Os01g08380|protein_coding|CODING|LOC_Os01g08380.1|1|1) FN2671-S.SNP.1:4118683 chr01:004118683 0 W/4118683-4118683 FN2671-S SNP C -> T AC=1;AN=200;BQB=0.999998;DP=4494;DP4=2309,1919,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.23742e-06;MQSB=0.869993;RPB=0.985663;SGB=22.2439;VDB=0.756064;EFF=INTRON(MODIFIER||||344|LOC_Os01g08400|protein_coding|CODING|LOC_Os01g08400.1|1|1) FN4083-S.SNP.1:4128413 chr01:004128413 0 W/4128413-4128413 FN4083-S SNP T -> C AC=1;AN=182;BQB=0.898503;DP=3214;DP4=1527,1591,18,22;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.96928e-25;MQSB=0.99618;RPB=0.99066;SGB=174.926;VDB=0.0772018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.1:4130793 chr01:004130793 0 W/4130793-4130793 FN-160 Single Base Substitution T-C INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN4002-S.SNP.1:4132297 chr01:004132297 0 W/4132297-4132297 FN4002-S SNP A -> G AC=1;AN=168;BQB=0.900795;DP=2697;DP4=1268,1296,2,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.14078e-06;MQSB=0.956855;RPB=0.756139;SGB=34.4498;VDB=0.300288;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.1:4134107 chr01:004134107 0 W/4134107-4134107 FN4230-S SNP A -> T AC=1;AN=170;BQB=0.444429;DP=2526;DP4=1332,1118,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.45645e-06;MQSB=0.974434;RPB=0.663232;SGB=19.8839;VDB=0.78371;EFF=INTRON(MODIFIER||||1022|LOC_Os01g08420|protein_coding|CODING|LOC_Os01g08420.1|1|1) FN1335-S.SNP.1:4137882 chr01:004137882 0 W/4137882-4137882 FN1335-S Single Base Substitution T-A INTRON HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN831-S.SNP.1:4137965 chr01:004137965 0 W/4137965-4137965 FN831-S Single Base Substitution T-C INTRON HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN450-S.SNP.1:4143624 chr01:004143624 0 W/4143624-4143624 FN450-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g08430 expressed protein SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN276-S.SNP.1:4147436 chr01:004147436 0 W/4147436-4147436 FN276-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g08430 expressed protein SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN276-S.SNP.1:4147437 chr01:004147437 0 W/4147437-4147437 FN276-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g08430 expressed protein SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1118-S.SNP.1:4147612 chr01:004147612 0 W/4147612-4147612 FN1118-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g08430 expressed protein SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2209-S.SNP.1:4151363 chr01:004151363 0 W/4151363-4151363 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.981858;DP=5148;DP4=2504,2242,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64865e-11;MQSB=0.962024;RPB=0.718488;SGB=31.3213;VDB=0.693103;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.1:4167830 chr01:004167830 0 W/4167830-4167830 FN1762-S SNP A -> G AC=1;AN=188;BQB=0.000824097;DP=3338;DP4=1776,1522,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000562564;MQSB=0.873042;RPB=0.547173;SGB=-126.603;VDB=0.598916;EFF=INTRON(MODIFIER||||453|LOC_Os01g08460|protein_coding|CODING|LOC_Os01g08460.1|10|1) FN-151.SNP.1:4169727 chr01:004169727 0 W/4169727-4169727 FN-151 Single Base Substitution T-G INTRON HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2435.SNP.1:4169727 chr01:004169727 0 W/4169727-4169727 FN2435 SNP T -> G AC=1;AN=200;BQB=0.886805;DP=5430;DP4=2838,2290,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.19518e-11;MQSB=0.99846;RPB=0.821311;SGB=72.7161;VDB=0.258547;EFF=INTRON(MODIFIER||||453|LOC_Os01g08460|protein_coding|CODING|LOC_Os01g08460.1|4|1) FN3376-S.SNP.1:4169727 chr01:004169727 0 W/4169727-4169727 FN3376-S SNP T -> G AC=1;AN=184;BQB=0.896465;DP=3431;DP4=1693,1601,17,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.33345e-16;MQSB=0.871109;RPB=0.350416;SGB=95.6183;VDB=0.231051;EFF=INTRON(MODIFIER||||453|LOC_Os01g08460|protein_coding|CODING|LOC_Os01g08460.1|4|1) FN2684-S.SNP.1:4170920 chr01:004170920 0 W/4170920-4170920 FN2684-S SNP G -> C AC=1;AN=200;BQB=0.479824;DP=4867;DP4=2389,2164,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.66302e-16;MQSB=0.947839;RPB=0.999489;SGB=87.1368;VDB=0.0516135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L155V|453|LOC_Os01g08460|protein_coding|CODING|LOC_Os01g08460.1|2|1) FN755-S.SNP.1:4172059 chr01:004172059 0 W/4172059-4172059 FN755-S Single Base Substitution A-T INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN755-S.SNP.1:4172060 chr01:004172060 0 W/4172060-4172060 FN755-S Single Base Substitution A-T INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN527-S.SNP.1:4175352 chr01:004175352 0 W/4175352-4175352 FN527-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2725-S.SNP.1:4177322 chr01:004177322 0 W/4177322-4177322 FN2725-S SNP C -> A AC=1;AN=200;BQB=0.987213;DP=5133;DP4=2466,2421,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.6476e-11;MQSB=0.879829;RPB=0.532005;SGB=65.5058;VDB=0.870515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.1:4177816 chr01:004177816 0 W/4177816-4177816 FN-377 Single Base Substitution G-A INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-377.SNP.1:4177817 chr01:004177817 0 W/4177817-4177817 FN-377 Single Base Substitution T-A INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN2691-S.SNP.1:4179380 chr01:004179380 0 W/4179380-4179380 FN2691-S SNP T -> A AC=1;AN=200;BQB=0.965671;DP=4819;DP4=2446,2104,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51761e-13;MQSB=0.926005;RPB=0.883434;SGB=69.1109;VDB=0.18298;EFF=UTR_3_PRIME(MODIFIER||369||520|LOC_Os01g08470|protein_coding|CODING|LOC_Os01g08470.1|1|1) FN2691-S.SNP.1:4179381 chr01:004179381 0 W/4179381-4179381 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.91031;DP=4804;DP4=2489,2105,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.5468e-13;MQSB=0.824406;RPB=0.650061;SGB=86.5007;VDB=0.0904733;EFF=UTR_3_PRIME(MODIFIER||368||520|LOC_Os01g08470|protein_coding|CODING|LOC_Os01g08470.1|1|1) FN542-S.SNP.1:4183148 chr01:004183148 0 W/4183148-4183148 FN542-S Single Base Substitution T-C INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2612-S.SNP.1:4192688 chr01:004192688 0 W/4192688-4192688 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.489772;DP=4415;DP4=2196,1915,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.305e-10;MQSB=0.158995;RPB=0.354336;SGB=55.2955;VDB=0.939828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.1:4201821 chr01:004201821 0 W/4201821-4201821 FN3944-S SNP G -> A AC=1;AN=168;BQB=0.778577;DP=2807;DP4=1307,1396,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.48923e-05;MQSB=0.735475;RPB=0.603843;SGB=31.3172;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.1:4203521 chr01:004203521 0 W/4203521-4203521 FN3869-S SNP C -> G AC=1;AN=158;BQB=0.976361;DP=2710;DP4=1316,1299,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.00228e-11;MQSB=0.998945;RPB=0.986207;SGB=54.2901;VDB=0.121953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.1:4203522 chr01:004203522 0 W/4203522-4203522 FN3869-S SNP A -> G AC=1;AN=158;BQB=0.389764;DP=2722;DP4=1319,1221,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.25224e-10;MQSB=0.992052;RPB=0.640666;SGB=10.3028;VDB=0.139379;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.1:4210664 chr01:004210664 0 W/4210664-4210664 FN628-S Single Base Substitution A-G INTRON HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3628-S.SNP.1:4213436 chr01:004213436 0 W/4213436-4213436 FN3628-S SNP G -> A AC=2;AN=190;BQB=0.53841;DP=3132;DP4=1952,1061,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.8338e-10;MQSB=0.956896;RPB=0.879419;SGB=41.5369;VDB=0.623515;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.1:4214656 chr01:004214656 0 W/4214656-4214656 W23-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN3945-S.SNP.1:4214677 chr01:004214677 0 W/4214677-4214677 FN3945-S SNP T -> A AC=1;AN=168;BQB=0.593288;DP=2778;DP4=1299,1353,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20782e-08;MQSB=0.955254;RPB=0.966589;SGB=52.1728;VDB=0.692801;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.1:4214678 chr01:004214678 0 W/4214678-4214678 FN3945-S SNP C -> T AC=1;AN=168;BQB=0.490408;DP=2755;DP4=1305,1354,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.36586e-10;MQSB=0.992497;RPB=0.786599;SGB=41.6096;VDB=0.720783;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.1:4222029 chr01:004222029 0 W/4222029-4222029 FN417-S Single Base Substitution C-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1221-S.SNP.1:4229506 chr01:004229506 0 W/4229506-4229506 FN1221-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1662-S.SNP.1:4239552 chr01:004239552 0 W/4239552-4239552 FN1662-S Single Base Substitution T-C INTRON HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN3676-S.SNP.1:4242481 chr01:004242481 0 W/4242481-4242481 FN3676-S SNP T -> C AC=1;AN=190;BQB=0.998538;DP=2774;DP4=1207,1461,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82124e-06;MQSB=0.999999;RPB=0.689069;SGB=28.9929;VDB=0.790654;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T308|1224|LOC_Os01g08540|protein_coding|CODING|LOC_Os01g08540.1|2|1) FN1230-S.SNP.1:4245967 chr01:004245967 0 W/4245967-4245967 FN1230-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g08550 aminoacyl-tRNA synthetase, putative, expressed SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1152-S.SNP.1:4251016 chr01:004251016 0 W/4251016-4251016 FN1152-S Single Base Substitution T-C INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN507-S.SNP.1:4255063 chr01:004255063 0 W/4255063-4255063 FN507-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN544-S.SNP.1:4257028 chr01:004257028 0 W/4257028-4257028 FN544-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN3843-S.SNP.1:4258638 chr01:004258638 0 W/4258638-4258638 FN3843-S SNP A -> T AC=1;AN=190;BQB=0.737727;DP=2978;DP4=1494,1409,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.30029e-07;MQSB=0.953902;RPB=0.769892;SGB=21.1058;VDB=0.976156;EFF=INTRON(MODIFIER||||845|LOC_Os01g08560|protein_coding|CODING|LOC_Os01g08560.1|8|1),INTRON(MODIFIER||||845|LOC_Os01g08560|protein_coding|CODING|LOC_Os01g08560.2|8|1) FN662-S.SNP.1:4264769 chr01:004264769 0 W/4264769-4264769 FN662-S Single Base Substitution T-C INTRON HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN-263.SNP.1:4268849 chr01:004268849 0 W/4268849-4268849 FN-263 Single Base Substitution G-C INTRON HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN2340.SNP.1:4278779 chr01:004278779 0 W/4278779-4278779 FN2340 SNP A -> G AC=1;AN=192;BQB=0.054155;DP=4843;DP4=2792,1734,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.85366e-07;MQSB=0.902185;RPB=0.796073;SGB=-11.9469;VDB=0.760716;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.1:4280264 chr01:004280264 0 W/4280264-4280264 FN4221-S SNP A -> G AC=1;AN=170;BQB=0.999448;DP=2363;DP4=917,1337,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.54608e-06;MQSB=0.965191;RPB=0.869758;SGB=21.1076;VDB=0.697669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.1:4284021 chr01:004284021 0 W/4284021-4284021 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.680007;DP=4768;DP4=2368,2105,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000419463;MQB=4.19727e-05;MQSB=0.0276596;RPB=0.941263;SGB=40.4492;VDB=0.465515;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.1:4293748 chr01:004293748 0 W/4293748-4293748 FN928-S Single Base Substitution A-G INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2574-S.SNP.1:4296957 chr01:004296957 0 W/4296957-4296957 FN2574-S SNP C -> A AC=1;AN=198;BQB=0.996537;DP=4300;DP4=2352,1774,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.91903e-06;MQSB=0.987965;RPB=0.979731;SGB=22.1736;VDB=0.267186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.1:4302732 chr01:004302732 0 W/4302732-4302732 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.997742;DP=2815;DP4=1456,1240,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.75175e-09;MQSB=0.578279;RPB=0.952621;SGB=67.3108;VDB=0.589592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.1:4319037 chr01:004319037 0 W/4319037-4319037 FN2435 SNP A -> G AC=1;AN=200;BQB=0.970776;DP=4727;DP4=2498,1875,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.11267e-12;MQSB=0.735969;RPB=0.833207;SGB=65.5058;VDB=0.700894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.1:4329260 chr01:004329260 0 W/4329260-4329260 FN1456-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3835-S.SNP.1:4334990 chr01:004334990 0 W/4334990-4334990 FN3835-S SNP A -> T AC=1;AN=190;BQB=0.92357;DP=2683;DP4=1186,1377,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.44775e-07;MQSB=0.992951;RPB=0.179886;SGB=39.9877;VDB=0.409296;EFF=INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.1|7|1),INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.2|7|1),INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.3|7|1),INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.4|7|1),INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.5|7|1),INTRON(MODIFIER||||1160|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.6|6|1),INTRON(MODIFIER||||970|LOC_Os01g08700|protein_coding|CODING|LOC_Os01g08700.8|7|1) FN426-S.SNP.1:4336834 chr01:004336834 0 W/4336834-4336834 FN426-S Single Base Substitution T-A INTRON HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN-412.SNP.1:4339492 chr01:004339492 0 W/4339492-4339492 FN-412 Single Base Substitution T-A INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN4104-S.SNP.1:4341138 chr01:004341138 0 W/4341138-4341138 FN4104-S SNP C -> G AC=1;AN=182;BQB=0.950697;DP=3058;DP4=1375,1626,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.03562e-06;MQSB=0.959325;RPB=0.792681;SGB=44.1115;VDB=0.602366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R385P|424|LOC_Os01g08710|protein_coding|CODING|LOC_Os01g08710.1|8|1) FN3581-S.SNP.1:4342377 chr01:004342377 0 W/4342377-4342377 FN3581-S SNP G -> A AC=2;AN=190;BQB=0.8058;DP=2886;DP4=1458,1301,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.37159e-10;MQSB=0.988089;RPB=0.973424;SGB=90.0802;VDB=0.660222;EFF=INTRON(MODIFIER||||424|LOC_Os01g08710|protein_coding|CODING|LOC_Os01g08710.1|6|1) FN3342-S.SNP.1:4359997 chr01:004359997 0 W/4359997-4359997 FN3342-S SNP A -> T AC=1;AN=184;BQB=0.976559;DP=3240;DP4=1714,1342,15,12;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.401235;MQB=0.00637081;MQSB=0.00769913;RPB=0.00255059;SGB=116.569;VDB=0.00962072;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M712L|1063|LOC_Os01g08720|protein_coding|CODING|LOC_Os01g08720.1|2|1) FN_N1-213-1.SNP.1:4360072 chr01:004360072 0 W/4360072-4360072 FN_N1-213-1 Single Base Substitution G-T Homo LOC_Os01g08720 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN4113-S.SNP.1:4364674 chr01:004364674 0 W/4364674-4364674 FN4113-S SNP C -> T AC=2;AN=182;BQB=0.950788;DP=3059;DP4=1588,1331,35,27;HOB=0.0217365;ICB=0.494567;MQ=22;MQ0F=0.0732265;MQB=0.0104257;MQSB=0.000945943;RPB=0.262166;SGB=268.664;VDB=0.28693;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C491|1037|LOC_Os01g08730|protein_coding|CODING|LOC_Os01g08730.1|2|1) FN684-S.SNP.1:4372484 chr01:004372484 0 W/4372484-4372484 FN684-S Single Base Substitution A-G INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1759-S.SNP.1:4375184 chr01:004375184 0 W/4375184-4375184 FN1759-S SNP G -> A AC=2;AN=188;BQB=0.0693034;DP=3342;DP4=1842,1428,27,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54168e-14;MQSB=0.965422;RPB=0.403503;SGB=-138.031;VDB=0.912088;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R40|3042|LOC_Os01g08750|protein_coding|CODING|LOC_Os01g08750.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R40|3042|LOC_Os01g08750|protein_coding|CODING|LOC_Os01g08750.2|2|1) FN-342.SNP.1:4376542 chr01:004376542 0 W/4376542-4376542 FN-342 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g08750 expressed protein SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-208.SNP.1:4378154 chr01:004378154 0 W/4378154-4378154 FN-208 Single Base Substitution T-C INTRON HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3632-S.SNP.1:4383483 chr01:004383483 0 W/4383483-4383483 FN3632-S SNP G -> C AC=1;AN=190;BQB=0.890146;DP=2792;DP4=1443,1254,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19012e-08;MQSB=0.869577;RPB=0.355001;SGB=23.6597;VDB=0.0558378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G1390R|3042|LOC_Os01g08750|protein_coding|CODING|LOC_Os01g08750.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G1390R|3042|LOC_Os01g08750|protein_coding|CODING|LOC_Os01g08750.2|11|1) FN323-S.SNP.1:4388658 chr01:004388658 0 W/4388658-4388658 FN323-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g08750 expressed protein SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN849-S.SNP.1:4395420 chr01:004395420 0 W/4395420-4395420 FN849-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2551-S.SNP.1:4396855 chr01:004396855 0 W/4396855-4396855 FN2551-S SNP T -> G AC=1;AN=198;BQB=0.910768;DP=4103;DP4=2072,1809,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.36107e-15;MQSB=0.657306;RPB=0.942548;SGB=113.881;VDB=0.344924;EFF=INTRON(MODIFIER||||350|LOC_Os01g08760|protein_coding|CODING|LOC_Os01g08760.1|6|1) FN3707-S.SNP.1:4398195 chr01:004398195 0 W/4398195-4398195 FN3707-S SNP C -> A AC=1;AN=190;BQB=0.936567;DP=2749;DP4=1332,1296,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.50479e-07;MQSB=0.550107;RPB=0.862996;SGB=44.5415;VDB=0.517147;EFF=INTRON(MODIFIER||||534|LOC_Os01g08770|protein_coding|CODING|LOC_Os01g08770.1|2|1) FN2364.SNP.1:4407796 chr01:004407796 0 W/4407796-4407796 FN2364 SNP T -> C AC=1;AN=192;BQB=0.948381;DP=5246;DP4=2804,2208,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.10798e-12;MQSB=0.929045;RPB=0.999671;SGB=68.2948;VDB=0.684965;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.1:4420934 chr01:004420934 0 W/4420934-4420934 FN631-S Single Base Substitution A-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN519-S.SNP.1:4422000 chr01:004422000 0 W/4422000-4422000 FN519-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g08810 cytochrome P450, putative, expressed SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN3420-S.SNP.1:4422715 chr01:004422715 0 W/4422715-4422715 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.214027;DP=3262;DP4=1361,1764,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00999807;MQSB=0.998217;RPB=0.889569;SGB=39.699;VDB=0.860346;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N445|505|LOC_Os01g08810|protein_coding|CODING|LOC_Os01g08810.1|1|1) FN3946-S.SNP.1:4425596 chr01:004425596 0 W/4425596-4425596 FN3946-S SNP G -> T AC=1;AN=168;BQB=0.942216;DP=2310;DP4=987,1203,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.87867e-05;MQSB=0.963751;RPB=0.58179;SGB=24.4556;VDB=0.560195;EFF=UTR_5_PRIME(MODIFIER||76||109|LOC_Os01g08814|protein_coding|CODING|LOC_Os01g08814.2|2|1),UTR_5_PRIME(MODIFIER||76||109|LOC_Os01g08814|protein_coding|CODING|LOC_Os01g08814.1|2|1),UTR_5_PRIME(MODIFIER||76||109|LOC_Os01g08814|protein_coding|CODING|LOC_Os01g08814.3|2|1) FN2740-S.SNP.1:4448414 chr01:004448414 0 W/4448414-4448414 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.342025;DP=4877;DP4=2409,2189,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03776e-06;MQSB=0.975724;RPB=0.914739;SGB=19.0642;VDB=0.913403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.1:4455457 chr01:004455457 0 W/4455457-4455457 FN1368-S Single Base Substitution A-C INTRON HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4103-S.SNP.1:4456346 chr01:004456346 0 W/4456346-4456346 FN4103-S SNP C -> T AC=1;AN=182;BQB=0.714442;DP=3270;DP4=1826,1366,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.60504e-07;MQSB=0.884973;RPB=0.605368;SGB=35.6277;VDB=0.0980084;EFF=INTRON(MODIFIER||||222|LOC_Os01g08880|protein_coding|CODING|LOC_Os01g08880.1|2|1) FN950-S.SNP.1:4474512 chr01:004474512 0 W/4474512-4474512 FN950-S Single Base Substitution A-G INTRON HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN3419-S.SNP.1:4478861 chr01:004478861 0 W/4478861-4478861 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.973642;DP=2667;DP4=1101,1464,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.39745;MQB=0.660974;MQSB=0.609402;RPB=0.226271;SGB=-239.192;VDB=0.371419;EFF=INTRON(MODIFIER||||174|LOC_Os01g08890|protein_coding|CODING|LOC_Os01g08890.1|1|1) FN2573-S.SNP.1:4483503 chr01:004483503 0 W/4483503-4483503 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.664344;DP=6381;DP4=3747,2325,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=25;MQ0F=0.229118;MQB=0.148912;MQSB=0;RPB=0.140704;SGB=25.7687;VDB=0.376037;EFF=INTRON(MODIFIER||||174|LOC_Os01g08890|protein_coding|CODING|LOC_Os01g08890.1|1|1) FN3652-S.SNP.1:4492376 chr01:004492376 0 W/4492376-4492376 FN3652-S SNP G -> A AC=2;AN=190;BQB=0.964713;DP=2957;DP4=1496,1344,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.40493e-14;MQSB=0.987638;RPB=0.99491;SGB=117.403;VDB=0.572099;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.1:4501178 chr01:004501178 0 W/4501178-4501178 FN1180-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g08970 SSRP1-like FACT complex subunit, putative, expressed SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN-310.SNP.1:4501887 chr01:004501887 0 W/4501887-4501887 FN-310 Single Base Substitution A-G INTRON HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1217-S.SNP.1:4518844 chr01:004518844 0 W/4518844-4518844 FN1217-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g09000 glutaminyl-tRNA synthetase, putative, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1724-S.SNP.1:4521761 chr01:004521761 0 W/4521761-4521761 FN1724-S SNP T -> C AC=1;AN=188;BQB=0.245156;DP=3740;DP4=1725,1966,18,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.12151e-17;MQSB=0.95232;RPB=0.980457;SGB=-166.286;VDB=0.475211;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.1:4522473 chr01:004522473 0 W/4522473-4522473 FN4149-S SNP C -> T AC=1;AN=170;BQB=0.631154;DP=2274;DP4=834,1363,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.62491e-05;MQSB=0.296653;RPB=0.196322;SGB=30.1021;VDB=0.261612;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.1:4525546 chr01:004525546 0 W/4525546-4525546 FN1419-S Single Base Substitution G-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2668-S.SNP.1:4533343 chr01:004533343 0 W/4533343-4533343 FN2668-S SNP G -> T AC=1;AN=200;BQB=0.96223;DP=4418;DP4=2476,1688,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.45298e-15;MQSB=0.804896;RPB=0.982878;SGB=79.9264;VDB=0.983487;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.1:4536320 chr01:004536320 0 W/4536320-4536320 FN-176 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g09020 WD domain, G-beta repeat domain containing protein, expressed SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN-392.SNP.1:4539037 chr01:004539037 0 W/4539037-4539037 FN-392 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g09020 WD domain, G-beta repeat domain containing protein, expressed SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN-392.SNP.1:4539038 chr01:004539038 0 W/4539038-4539038 FN-392 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2106-S.SNP.1:4548549 chr01:004548549 0 W/4548549-4548549 FN2106-S SNP A -> G AC=1;AN=168;BQB=0.748327;DP=4114;DP4=2031,2044,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.46144e-10;MQSB=0.995988;RPB=0.137517;SGB=-40.6433;VDB=0.0615081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.1:4550369 chr01:004550369 0 W/4550369-4550369 FN1262-S Single Base Substitution G-C INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3778-S.SNP.1:4557094 chr01:004557094 0 W/4557094-4557094 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.967317;DP=2333;DP4=1013,1203,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00600086;MQB=0.126368;MQSB=0.0671831;RPB=0.989371;SGB=62.7569;VDB=0.438313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.1:4558322 chr01:004558322 0 W/4558322-4558322 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.999855;DP=2879;DP4=1279,1475,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.57036e-07;MQSB=0.187215;RPB=0.897583;SGB=62.3078;VDB=0.400066;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.1:4570832 chr01:004570832 0 W/4570832-4570832 FN4185-S SNP C -> T AC=2;AN=170;BQB=0.682998;DP=1755;DP4=968,612,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.24952e-07;MQSB=0.963558;RPB=0.521846;SGB=48.6486;VDB=0.447724;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.1:4576223 chr01:004576223 0 W/4576223-4576223 FN-123 Single Base Substitution G-A INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN2591-S.SNP.1:4579581 chr01:004579581 0 W/4579581-4579581 FN2591-S SNP C -> A AC=2;AN=198;BQB=0.941586;DP=3853;DP4=2332,1291,10,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.69774e-08;MQSB=0.998753;RPB=0.907463;SGB=24.1541;VDB=0.0487008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.1:4580688 chr01:004580688 0 W/4580688-4580688 FN1258-S Single Base Substitution C-A INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2532-S.SNP.1:4589000 chr01:004589000 0 W/4589000-4589000 FN2532-S SNP T -> A AC=2;AN=198;BQB=0.68467;DP=4607;DP4=1960,2371,17,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.75085e-18;MQSB=0.996422;RPB=0.803755;SGB=108.456;VDB=0.90591;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.1:4612601 chr01:004612601 0 W/4612601-4612601 FN1329-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-316.SNP.1:4633858 chr01:004633858 0 W/4633858-4633858 FN-316 Single Base Substitution T-C INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1217-S.SNP.1:4637693 chr01:004637693 0 W/4637693-4637693 FN1217-S Single Base Substitution T-C INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN531-S.SNP.1:4638804 chr01:004638804 0 W/4638804-4638804 FN531-S Single Base Substitution G-T INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN1435-S.SNP.1:4646379 chr01:004646379 0 W/4646379-4646379 FN1435-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1738-S.SNP.1:4653144 chr01:004653144 0 W/4653144-4653144 FN1738-S SNP C -> T AC=1;AN=188;BQB=0.0294217;DP=3554;DP4=1975,1531,21,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71232e-14;MQSB=0.519263;RPB=0.138491;SGB=-450.051;VDB=0.223397;EFF=INTERGENIC(MODIFIER||||||||||1) FN1084-S.SNP.1:4654083 chr01:004654083 0 W/4654083-4654083 FN1084-S Single Base Substitution G-A INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2656-S.SNP.1:4655561 chr01:004655561 0 W/4655561-4655561 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.0752167;DP=4599;DP4=2320,1915,18,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84695e-25;MQSB=0.834963;RPB=0.951178;SGB=141.214;VDB=0.036706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.1:4658930 chr01:004658930 0 W/4658930-4658930 FN1314-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN2330.SNP.1:4668371 chr01:004668371 0 W/4668371-4668371 FN2330 SNP G -> A AC=2;AN=192;BQB=0.99988;DP=4580;DP4=2137,2241,15,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.15983e-16;MQSB=0.971545;RPB=0.843173;SGB=117.676;VDB=0.783261;EFF=INTERGENIC(MODIFIER||||||||||1) FN4036-S.SNP.1:4672104 chr01:004672104 0 W/4672104-4672104 FN4036-S SNP C -> T AC=1;AN=168;BQB=0.373459;DP=2615;DP4=1160,1347,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.99619e-06;MQSB=0.969561;RPB=0.65321;SGB=41.6096;VDB=0.826048;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.1:4673747 chr01:004673747 0 W/4673747-4673747 FN792-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g09246 glycine-rich protein, putative, expressed SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN444-S.SNP.1:4687149 chr01:004687149 0 W/4687149-4687149 FN444-S Single Base Substitution C-A INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2340.SNP.1:4687256 chr01:004687256 0 W/4687256-4687256 FN2340 SNP T -> C AC=1;AN=192;BQB=0.38972;DP=4661;DP4=1979,2286,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.80506e-06;MQSB=0.990105;RPB=0.164208;SGB=36.607;VDB=0.868655;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.1:4687932 chr01:004687932 0 W/4687932-4687932 FN505-S Single Base Substitution A-C INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2450.SNP.1:4694462 chr01:004694462 0 W/4694462-4694462 FN2450 SNP G -> T AC=1;AN=200;BQB=0.946571;DP=5064;DP4=2221,2425,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.49513e-11;MQSB=0.939363;RPB=0.992684;SGB=34.6953;VDB=0.0711558;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.1:4696346 chr01:004696346 0 W/4696346-4696346 FN4130-S SNP T -> A AC=2;AN=182;BQB=0.962363;DP=2891;DP4=1481,1346,9,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.70607e-11;MQSB=0.999945;RPB=0.42389;SGB=49.6712;VDB=0.472408;EFF=INTERGENIC(MODIFIER||||||||||1) FN-138.SNP.1:4698622 chr01:004698622 0 W/4698622-4698622 FN-138 Single Base Substitution A-G INTRON HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN425-S.SNP.1:4700157 chr01:004700157 0 W/4700157-4700157 FN425-S Single Base Substitution A-G INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN2218-S.SNP.1:4705422 chr01:004705422 0 W/4705422-4705422 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.705503;DP=4989;DP4=2308,2336,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.46221e-12;MQSB=0.470581;RPB=0.857883;SGB=57.4238;VDB=0.910973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.1:4706309 chr01:004706309 0 W/4706309-4706309 FN2266-S SNP T -> C AC=2;AN=190;BQB=0.20256;DP=4995;DP4=2057,2597,21,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.91146e-24;MQSB=0.875983;RPB=0.999167;SGB=139.163;VDB=0.0711863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.1:4719168 chr01:004719168 0 W/4719168-4719168 FN2395 SNP C -> T AC=1;AN=200;BQB=0.402756;DP=5428;DP4=2288,2247,24,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.32987e-19;MQSB=0.894304;RPB=0.528152;SGB=-349.203;VDB=0.667781;EFF=INTERGENIC(MODIFIER||||||||||1) FN-7.SNP.1:4722888 chr01:004722888 0 W/4722888-4722888 FN-7 Single Base Substitution T-C INTERGENIC HET SNo: 7, Mutant_ID: FN-7, Generation: M2, Mutations: 27, Genes: 11, Seed availability: Yes. FN2116-S.SNP.1:4725323 chr01:004725323 0 W/4725323-4725323 FN2116-S SNP A -> C AC=2;AN=168;BQB=0.761145;DP=2732;DP4=1267,1381,22,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.02566e-16;MQSB=0.720558;RPB=0.426473;SGB=-134.031;VDB=0.236387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.1:4726471 chr01:004726471 0 W/4726471-4726471 FN1673-S SNP A -> G AC=2;AN=188;BQB=0.000585039;DP=3781;DP4=1274,2458,5,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.53145e-10;MQSB=0.951708;RPB=0.723061;SGB=22.5144;VDB=0.302047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.1:4726833 chr01:004726833 0 W/4726833-4726833 FN2719-S SNP C -> T AC=1;AN=200;BQB=0.469895;DP=4753;DP4=2246,2225,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97143e-11;MQSB=0.849302;RPB=0.815481;SGB=39.9056;VDB=0.484253;EFF=UTR_5_PRIME(MODIFIER||58||361|LOC_Os01g09300|protein_coding|CODING|LOC_Os01g09300.1|1|1),UTR_5_PRIME(MODIFIER||58||334|LOC_Os01g09300|protein_coding|CODING|LOC_Os01g09300.2|1|1),UTR_5_PRIME(MODIFIER||58||329|LOC_Os01g09300|protein_coding|CODING|LOC_Os01g09300.3|1|1) FN2562-S.SNP.1:4733220 chr01:004733220 0 W/4733220-4733220 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.998048;DP=4129;DP4=1933,1974,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242189;MQB=2.14133e-16;MQSB=0.990652;RPB=0.799081;SGB=57.8907;VDB=0.779632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.1:4747817 chr01:004747817 0 W/4747817-4747817 FN1262-S Single Base Substitution A-G INTRON HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3657-S.SNP.1:4755265 chr01:004755265 0 W/4755265-4755265 FN3657-S SNP C -> A AC=1;AN=190;BQB=0.677254;DP=2769;DP4=1303,1376,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00128466;MQSB=0.24731;RPB=0.394261;SGB=39.9877;VDB=0.723365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K438N|546|LOC_Os01g09340|protein_coding|CODING|LOC_Os01g09340.1|1|1) FN2252-S.SNP.1:4757132 chr01:004757132 0 W/4757132-4757132 FN2252-S SNP G -> T AC=1;AN=190;BQB=0.998445;DP=4402;DP4=2042,1993,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=8.72866e-05;MQSB=0.0280362;RPB=0.23496;SGB=5.66499;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.1:4789387 chr01:004789387 0 W/4789387-4789387 FN2339 SNP G -> A AC=2;AN=192;BQB=0.970142;DP=4965;DP4=1915,2718,16,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.13168e-21;MQSB=0.897933;RPB=0.960285;SGB=167.883;VDB=0.329179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.1:4798042 chr01:004798042 0 W/4798042-4798042 FN3661-S SNP G -> A AC=2;AN=190;BQB=0.806161;DP=2563;DP4=1208,1262,9,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.39639e-08;MQSB=0.908643;RPB=0.711607;SGB=76.4186;VDB=0.868703;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I108|498|LOC_Os01g09420|protein_coding|CODING|LOC_Os01g09420.1|1|1) FN3400-S.SNP.1:4798484 chr01:004798484 0 W/4798484-4798484 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.993897;DP=3109;DP4=1412,1618,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21005e-07;MQSB=0.925894;RPB=0.554521;SGB=48.7425;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.1:4799340 chr01:004799340 0 W/4799340-4799340 FN_814-7-1 Single Base Substitution C-T Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN524-S.SNP.1:4803652 chr01:004803652 0 W/4803652-4803652 FN524-S Single Base Substitution C-G INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1266-S.SNP.1:4805437 chr01:004805437 0 W/4805437-4805437 FN1266-S Single Base Substitution G-A INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2335.SNP.1:4805904 chr01:004805904 0 W/4805904-4805904 FN2335 SNP G -> A AC=1;AN=192;BQB=0.999681;DP=5010;DP4=2413,2335,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.23694e-10;MQSB=0.530614;RPB=0.976414;SGB=64.7304;VDB=0.193647;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.1:4807427 chr01:004807427 0 W/4807427-4807427 FN489-S Single Base Substitution A-G INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN2611-S.SNP.1:4811802 chr01:004811802 0 W/4811802-4811802 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.270964;DP=4493;DP4=2238,1846,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60049e-17;MQSB=0.373301;RPB=0.691806;SGB=60.747;VDB=0.44076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.1:4811943 chr01:004811943 0 W/4811943-4811943 FN2611-S SNP G -> T AC=1;AN=200;BQB=0.860394;DP=4809;DP4=2272,2223,17,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5977e-22;MQSB=0.953158;RPB=0.990653;SGB=169.394;VDB=0.510335;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.1:4812020 chr01:004812020 0 W/4812020-4812020 FN-202 Single Base Substitution C-G INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN_789-3-1.SNP.1:4819500 chr01:004819500 0 W/4819500-4819500 FN_789-3-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1215-S.SNP.1:4822767 chr01:004822767 0 W/4822767-4822767 FN1215-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g09460 hexokinase, putative, expressed SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1717-S.SNP.1:4825496 chr01:004825496 0 W/4825496-4825496 FN1717-S SNP A -> G AC=2;AN=188;BQB=0.707596;DP=3463;DP4=1628,1773,20,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.15837e-16;MQSB=0.997209;RPB=0.994741;SGB=-91.0366;VDB=0.737176;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.1:4825528 chr01:004825528 0 W/4825528-4825528 FN-223 Single Base Substitution T-C INTERGENIC HOMO SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3393-S.SNP.1:4825890 chr01:004825890 0 W/4825890-4825890 FN3393-S SNP G -> T AC=1;AN=184;BQB=0.894416;DP=3130;DP4=1365,1659,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.82037e-11;MQSB=0.996071;RPB=0.958867;SGB=80.3949;VDB=0.955598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.1:4833269 chr01:004833269 0 W/4833269-4833269 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.73057;DP=4311;DP4=2176,1909,6,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.92469e-05;MQSB=0.00121846;RPB=0.932487;SGB=63.4749;VDB=0.338855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-84.SNP.1:4833951 chr01:004833951 0 W/4833951-4833951 FN-84 Single Base Substitution C-T INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1285-S.SNP.1:4834090 chr01:004834090 0 W/4834090-4834090 FN1285-S Single Base Substitution A-T INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1053-S.SNP.1:4834399 chr01:004834399 0 W/4834399-4834399 FN1053-S Single Base Substitution T-C INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN3822-S.SNP.1:4835718 chr01:004835718 0 W/4835718-4835718 FN3822-S SNP G -> A AC=2;AN=190;BQB=0.942402;DP=2959;DP4=1266,1394,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.83465e-12;MQSB=0.918119;RPB=0.713794;SGB=21.2038;VDB=0.811998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.1:4839457 chr01:004839457 0 W/4839457-4839457 FN2114-S SNP A -> G AC=1;AN=168;BQB=0.00148071;DP=3499;DP4=1254,2177,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00109884;MQSB=2.97991e-05;RPB=0.272237;SGB=-112.21;VDB=0.0470787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.1:4850433 chr01:004850433 0 W/4850433-4850433 FN2165-S SNP C -> T AC=1;AN=168;BQB=0.40672;DP=3739;DP4=1821,1872,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=6.93121e-06;MQSB=0.104327;RPB=0.526739;SGB=-140.764;VDB=0.139635;EFF=INTRON(MODIFIER||||121|LOC_Os01g09500|protein_coding|CODING|LOC_Os01g09500.1|5|1) FN3967-S.SNP.1:4860975 chr01:004860975 0 W/4860975-4860975 FN3967-S SNP G -> A AC=1;AN=182;BQB=0.998288;DP=5718;DP4=2961,2648,11,11;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.0648828;MQB=0.567108;MQSB=1.86599e-07;RPB=0.920135;SGB=67.2255;VDB=0.422935;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1257|2013|LOC_Os01g09520|protein_coding|CODING|LOC_Os01g09520.1|3|1) FN1116-S.SNP.1:4876587 chr01:004876587 0 W/4876587-4876587 FN1116-S Single Base Substitution C-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1030-S.SNP.1:4894594 chr01:004894594 0 W/4894594-4894594 FN1030-S Single Base Substitution T-A INTRON HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2479.SNP.1:4899764 chr01:004899764 0 W/4899764-4899764 FN2479 SNP A -> T AC=1;AN=200;BQB=0.297218;DP=4152;DP4=1843,1494,19,13;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0;MQB=0.000576065;MQSB=0.0316675;RPB=0.967849;SGB=-41.238;VDB=0.402094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.1:4901694 chr01:004901694 0 W/4901694-4901694 FN1465-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1433-S.SNP.1:4903793 chr01:004903793 0 W/4903793-4903793 FN1433-S Single Base Substitution A-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN-268.SNP.1:4905180 chr01:004905180 0 W/4905180-4905180 FN-268 Single Base Substitution T-A INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-268.SNP.1:4905181 chr01:004905181 0 W/4905181-4905181 FN-268 Single Base Substitution C-A INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-216.SNP.1:4918023 chr01:004918023 0 W/4918023-4918023 FN-216 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-168.SNP.1:4922948 chr01:004922948 0 W/4922948-4922948 FN-168 Single Base Substitution A-T INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN-89.SNP.1:4922994 chr01:004922994 0 W/4922994-4922994 FN-89 Single Base Substitution A-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2701-S.SNP.1:4923166 chr01:004923166 0 W/4923166-4923166 FN2701-S SNP G -> C AC=2;AN=200;BQB=0.979482;DP=4938;DP4=2115,2498,21,40;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0;MQB=4.98873e-11;MQSB=0.121738;RPB=0.613728;SGB=144.112;VDB=0.213641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.1:4931023 chr01:004931023 0 W/4931023-4931023 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.691391;DP=3850;DP4=1954,1840,11,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.50977e-11;MQSB=0.945957;RPB=0.771394;SGB=-73.5561;VDB=0.312165;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.1:4952797 chr01:004952797 0 W/4952797-4952797 FN680-S Single Base Substitution A-C INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN680-S.SNP.1:4952799 chr01:004952799 0 W/4952799-4952799 FN680-S Single Base Substitution A-T INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN680-S.SNP.1:4952801 chr01:004952801 0 W/4952801-4952801 FN680-S Single Base Substitution A-T INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN_829-2-5.SNP.1:4958488 chr01:004958488 0 W/4958488-4958488 FN_829-2-5 Single Base Substitution G-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3528-S.SNP.1:4973339 chr01:004973339 0 W/4973339-4973339 FN3528-S SNP A -> T AC=1;AN=188;BQB=0.724521;DP=3215;DP4=1271,1786,12,18;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.00362e-09;MQSB=3.70481e-05;RPB=0.786203;SGB=130.758;VDB=0.203683;EFF=UTR_5_PRIME(MODIFIER||106||310|LOC_Os01g09640|protein_coding|CODING|LOC_Os01g09640.1|1|1) FN_N2-29a-1.SNP.1:4974436 chr01:004974436 0 W/4974436-4974436 FN_N2-29a-1 Single Base Substitution A-G Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN-6.SNP.1:4976663 chr01:004976663 0 W/4976663-4976663 FN-6 Single Base Substitution T-C INTERGENIC Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN1273-S.SNP.1:4976696 chr01:004976696 0 W/4976696-4976696 FN1273-S Single Base Substitution G-A INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN2342.SNP.1:4977770 chr01:004977770 0 W/4977770-4977770 FN2342 SNP A -> T AC=2;AN=192;BQB=0.780514;DP=5066;DP4=2514,2236,15,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000197394;MQB=9.02665e-18;MQSB=0.563066;RPB=0.796269;SGB=-4.04606;VDB=0.639365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.1:4977771 chr01:004977771 0 W/4977771-4977771 FN2342 SNP A -> T AC=2;AN=192;BQB=0.724977;DP=5069;DP4=2500,2207,17,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000197278;MQB=5.80331e-19;MQSB=0.622077;RPB=0.908721;SGB=-88.9069;VDB=0.375846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.1:4982892 chr01:004982892 0 W/4982892-4982892 FN1662-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN1537-S.SNP.1:4985646 chr01:004985646 0 W/4985646-4985646 FN1537-S Single Base Substitution A-G INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2593-S.SNP.1:4985946 chr01:004985946 0 W/4985946-4985946 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.840941;DP=4467;DP4=2193,1972,17,21;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0;MQB=0.00315119;MQSB=0.000190398;RPB=0.92272;SGB=83.8419;VDB=0.132087;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.1:4998519 chr01:004998519 0 W/4998519-4998519 FN690-S Single Base Substitution A-G INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN-368.SNP.1:4998884 chr01:004998884 0 W/4998884-4998884 FN-368 Single Base Substitution C-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN690-S.SNP.1:5001710 chr01:005001710 0 W/5001710-5001710 FN690-S Single Base Substitution G-C INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3569-S.SNP.1:5004743 chr01:005004743 0 W/5004743-5004743 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.996721;DP=2518;DP4=1130,1334,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.95585e-10;MQSB=0.99432;RPB=0.773558;SGB=43.0708;VDB=0.56639;EFF=INTRON(MODIFIER||||510|LOC_Os01g09700|protein_coding|CODING|LOC_Os01g09700.1|1|1) FN468-S.SNP.1:5011004 chr01:005011004 0 W/5011004-5011004 FN468-S Single Base Substitution C-T INTRON HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1371-S.SNP.1:5011172 chr01:005011172 0 W/5011172-5011172 FN1371-S Single Base Substitution C-T INTRON HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3840-S.SNP.1:5022826 chr01:005022826 0 W/5022826-5022826 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.928882;DP=2532;DP4=1237,1217,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0575e-05;MQSB=0.987472;RPB=0.825459;SGB=21.8853;VDB=0.737297;EFF=INTRON(MODIFIER||||557|LOC_Os01g09750|protein_coding|CODING|LOC_Os01g09750.1|6|1),INTRON(MODIFIER||||557|LOC_Os01g09750|protein_coding|CODING|LOC_Os01g09750.2|6|1) FN1441-S.SNP.1:5023484 chr01:005023484 0 W/5023484-5023484 FN1441-S Single Base Substitution A-C INTRON HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3541-S.SNP.1:5031583 chr01:005031583 0 W/5031583-5031583 FN3541-S SNP A -> G AC=2;AN=188;BQB=0.999159;DP=2623;DP4=1118,1448,4,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.78205e-12;MQSB=0.997024;RPB=0.999688;SGB=80.782;VDB=0.802913;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G162|872|LOC_Os01g09760|protein_coding|CODING|LOC_Os01g09760.1|6|1) FN2557-S.SNP.1:5034394 chr01:005034394 0 W/5034394-5034394 FN2557-S SNP C -> T AC=2;AN=198;BQB=0.816918;DP=4257;DP4=1991,1980,16,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.64541e-17;MQSB=0.867447;RPB=0.868569;SGB=34.8713;VDB=0.882223;EFF=INTRON(MODIFIER||||872|LOC_Os01g09760|protein_coding|CODING|LOC_Os01g09760.1|11|1) FN1461-S.SNP.1:5041884 chr01:005041884 0 W/5041884-5041884 FN1461-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-350.SNP.1:5047925 chr01:005047925 0 W/5047925-5047925 FN-350 Single Base Substitution T-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2403.SNP.1:5051625 chr01:005051625 0 W/5051625-5051625 FN2403 SNP C -> A AC=1;AN=200;BQB=0.0220914;DP=3382;DP4=1737,1493,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.95796e-06;MQSB=0.962868;RPB=0.909207;SGB=19.0642;VDB=0.830794;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.1:5056907 chr01:005056907 0 W/5056907-5056907 W276-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1385-S.SNP.1:5063171 chr01:005063171 0 W/5063171-5063171 FN1385-S Single Base Substitution A-G INTRON HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN812-S.SNP.1:5064277 chr01:005064277 0 W/5064277-5064277 FN812-S Single Base Substitution A-C INTRON HOMO SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3819-S.SNP.1:5066986 chr01:005066986 0 W/5066986-5066986 FN3819-S SNP A -> G AC=1;AN=190;BQB=0.998028;DP=2572;DP4=1255,1223,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48896e-08;MQSB=0.999716;RPB=0.936683;SGB=53.6492;VDB=0.149077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.1:5070091 chr01:005070091 0 W/5070091-5070091 FN1633-S Single Base Substitution A-G INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1108-S.SNP.1:5070315 chr01:005070315 0 W/5070315-5070315 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN-238.SNP.1:5072860 chr01:005072860 0 W/5072860-5072860 FN-238 Single Base Substitution G-A INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3670-S.SNP.1:5073163 chr01:005073163 0 W/5073163-5073163 FN3670-S SNP T -> C AC=2;AN=190;BQB=0.353817;DP=2760;DP4=1157,1392,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.97986e-12;MQSB=0.980915;RPB=0.790322;SGB=30.527;VDB=0.783805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.1:5076331 chr01:005076331 0 W/5076331-5076331 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.950512;DP=3583;DP4=1638,1727,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.25378e-07;MQSB=0.98472;RPB=0.271629;SGB=24.1541;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.1:5076958 chr01:005076958 0 W/5076958-5076958 W598-2-1 Single Base Substitution C-A INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN3705-S.SNP.1:5077408 chr01:005077408 0 W/5077408-5077408 FN3705-S SNP A -> T AC=1;AN=190;BQB=0.982526;DP=2877;DP4=1535,1184,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.35363e-06;MQSB=0.904951;RPB=0.887781;SGB=10.8904;VDB=0.627244;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.1:5077408 chr01:005077408 0 W/5077408-5077408 FN796-S Single Base Substitution A-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN1321-S.SNP.1:5078043 chr01:005078043 0 W/5078043-5078043 FN1321-S Single Base Substitution G-T INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3777-S.SNP.1:5078131 chr01:005078131 0 W/5078131-5078131 FN3777-S SNP C -> T AC=2;AN=190;BQB=0.960619;DP=3362;DP4=1169,2005,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.24644e-18;MQSB=0.95038;RPB=0.608548;SGB=69.6295;VDB=0.0835267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.1:5083493 chr01:005083493 0 W/5083493-5083493 FN3613-S SNP T -> A AC=1;AN=190;BQB=0.295053;DP=3415;DP4=1742,1580,18,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.52435e-13;MQSB=0.999198;RPB=0.966479;SGB=28.9731;VDB=0.454658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.1:5088645 chr01:005088645 0 W/5088645-5088645 FN2295 SNP T -> C AC=1;AN=192;BQB=0.808948;DP=4476;DP4=2388,1875,5,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.17466e-12;MQSB=0.77088;RPB=0.97817;SGB=16.7409;VDB=0.542996;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.1:5089683 chr01:005089683 0 W/5089683-5089683 FN507-S Single Base Substitution G-T INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-401.SNP.1:5089721 chr01:005089721 0 W/5089721-5089721 FN-401 Single Base Substitution T-C INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN4074-S.SNP.1:5096109 chr01:005096109 0 W/5096109-5096109 FN4074-S SNP G -> T AC=1;AN=182;BQB=0.994947;DP=3111;DP4=1675,1292,9,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.82477e-06;MQSB=0.996913;RPB=0.131744;SGB=44.1115;VDB=0.0737652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.1:5097971 chr01:005097971 0 W/5097971-5097971 FN3867-S SNP C -> A AC=1;AN=158;BQB=0.894166;DP=2557;DP4=1065,1396,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000391083;MQB=4.38941e-06;MQSB=0.32483;RPB=0.181598;SGB=38.3284;VDB=0.690639;EFF=INTERGENIC(MODIFIER||||||||||1) 707-3.SNP.1:5104302 chr01:005104302 0 W/5104302-5104302 707-3 Single Base Substitution T-C INTRON Homo SNo: 1471, Mutant_ID: 707-3, Generation: M2, Mutations: 34, Genes: 31, Seed availability: Yes. FN3332-S.SNP.1:5107658 chr01:005107658 0 W/5107658-5107658 FN3332-S SNP C -> G AC=1;AN=184;BQB=0.28665;DP=2871;DP4=1377,1369,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.71242e-08;MQSB=0.971956;RPB=0.727924;SGB=11.3677;VDB=0.569158;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.1:5109514 chr01:005109514 0 W/5109514-5109514 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.987796;DP=2493;DP4=1207,1205,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.44967e-08;MQSB=0.968582;RPB=0.93588;SGB=61.2001;VDB=0.83979;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.1:5116356 chr01:005116356 0 W/5116356-5116356 FN872-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g09860 retrotransposon protein, putative, unclassified, expressed SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2664-S.SNP.1:5126922 chr01:005126922 0 W/5126922-5126922 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.206809;DP=5017;DP4=2430,2322,21,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.01356e-20;MQSB=0.999826;RPB=0.941787;SGB=150.973;VDB=0.237833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.1:5127223 chr01:005127223 0 W/5127223-5127223 FN1067-S Single Base Substitution G-A INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN446-S.SNP.1:5127823 chr01:005127823 0 W/5127823-5127823 FN446-S Single Base Substitution C-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN952-S.SNP.1:5128174 chr01:005128174 0 W/5128174-5128174 FN952-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g09870 expressed protein SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1380-S.SNP.1:5129314 chr01:005129314 0 W/5129314-5129314 FN1380-S Single Base Substitution G-A INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. W721-2-1.SNP.1:5131670 chr01:005131670 0 W/5131670-5131670 W721-2-1 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN974-S.SNP.1:5133426 chr01:005133426 0 W/5133426-5133426 FN974-S Single Base Substitution T-A INTERGENIC HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN974-S.SNP.1:5133429 chr01:005133429 0 W/5133429-5133429 FN974-S Single Base Substitution T-A INTERGENIC HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN564-S.SNP.1:5134226 chr01:005134226 0 W/5134226-5134226 FN564-S Single Base Substitution T-C INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN1701-S.SNP.1:5135358 chr01:005135358 0 W/5135358-5135358 FN1701-S SNP G -> T AC=1;AN=188;BQB=0.0584;DP=3931;DP4=1984,1911,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000171904;MQSB=0.861559;RPB=0.851126;SGB=0.908326;VDB=0.358296;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.1:5140056 chr01:005140056 0 W/5140056-5140056 FN4311-S SNP T -> C AC=1;AN=170;BQB=0.980084;DP=2458;DP4=1145,1244,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.48222e-05;MQSB=0.96142;RPB=0.997194;SGB=30.1021;VDB=0.24632;EFF=INTRON(MODIFIER||||199|LOC_Os01g09890|protein_coding|CODING|LOC_Os01g09890.1|2|1) FN3446-S.SNP.1:5146866 chr01:005146866 0 W/5146866-5146866 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.775429;DP=2499;DP4=1218,1196,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90923e-05;MQSB=0.97546;RPB=0.258811;SGB=44.2207;VDB=0.518745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.1:5151144 chr01:005151144 0 W/5151144-5151144 FN3964-S SNP C -> T AC=1;AN=168;BQB=0.782795;DP=2349;DP4=1067,1168,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2328e-08;MQSB=0.995914;RPB=0.538779;SGB=61.0344;VDB=0.0885925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.1:5153080 chr01:005153080 0 W/5153080-5153080 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.0925047;DP=4382;DP4=1689,2437,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.33795e-07;MQSB=0.559262;RPB=0.392604;SGB=31.9395;VDB=0.885435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.1:5155659 chr01:005155659 0 W/5155659-5155659 FN1086-S Single Base Substitution T-C INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4221-S.SNP.1:5156500 chr01:005156500 0 W/5156500-5156500 FN4221-S SNP A -> T AC=1;AN=170;BQB=0.995558;DP=2743;DP4=1391,1290,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0822e-07;MQSB=0.828211;RPB=0.541794;SGB=56.7575;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.1:5167446 chr01:005167446 0 W/5167446-5167446 FN730-S Single Base Substitution C-T INTRON HOMO SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-335.SNP.1:5170020 chr01:005170020 0 W/5170020-5170020 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-281.SNP.1:5174596 chr01:005174596 0 W/5174596-5174596 FN-281 Single Base Substitution T-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2243-S.SNP.1:5189564 chr01:005189564 0 W/5189564-5189564 FN2243-S SNP C -> A AC=1;AN=190;BQB=0.26023;DP=4596;DP4=2139,2181,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.291e-09;MQSB=0.851662;RPB=0.742864;SGB=-12.1142;VDB=0.450601;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.1:5202738 chr01:005202738 0 W/5202738-5202738 FN677-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g09990 helix-loop-helix DNA-binding domain containing protein, expressed SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN1471-S.SNP.1:5235025 chr01:005235025 0 W/5235025-5235025 FN1471-S SNP A -> T AC=2;AN=188;BQB=0.88697;DP=3491;DP4=1794,1642,23,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.21295e-20;MQSB=0.997165;RPB=0.957679;SGB=47.2072;VDB=0.360586;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.1:5239849 chr01:005239849 0 W/5239849-5239849 FN4030-S SNP C -> T AC=1;AN=168;BQB=0.999616;DP=2483;DP4=1207,1175,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.25394e-08;MQSB=0.99139;RPB=0.998673;SGB=38.1788;VDB=0.855875;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V379|490|LOC_Os01g10040|protein_coding|CODING|LOC_Os01g10040.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V132|243|LOC_Os01g10040|protein_coding|CODING|LOC_Os01g10040.2|3|1) FN898-S.SNP.1:5246166 chr01:005246166 0 W/5246166-5246166 FN898-S Single Base Substitution C-T INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2216-S.SNP.1:5251523 chr01:005251523 0 W/5251523-5251523 FN2216-S SNP C -> T AC=2;AN=190;BQB=0.948945;DP=2783;DP4=736,1825,6,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.1551e-09;MQSB=0.0494302;RPB=0.857168;SGB=64.5316;VDB=0.703561;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:5254442 chr01:005254442 0 W/5254442-5254442 FN951-S Single Base Substitution C-T INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2670-S.SNP.1:5256891 chr01:005256891 0 W/5256891-5256891 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.691893;DP=4347;DP4=1945,2105,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60141e-10;MQSB=0.227689;RPB=0.675295;SGB=51.0851;VDB=0.656256;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E86|166|LOC_Os01g10070|protein_coding|CODING|LOC_Os01g10070.1|1|1) FN1086-S.SNP.1:5263225 chr01:005263225 0 W/5263225-5263225 FN1086-S Single Base Substitution T-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2224-S.SNP.1:5265450 chr01:005265450 0 W/5265450-5265450 FN2224-S SNP G -> C AC=2;AN=190;BQB=0.983333;DP=4837;DP4=2217,2290,27,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00020674;MQB=7.79225e-27;MQSB=0.542214;RPB=0.976867;SGB=6.71759;VDB=0.612996;EFF=INTRON(MODIFIER||||147|LOC_Os01g10100|protein_coding|CODING|LOC_Os01g10100.1|1|1),INTRON(MODIFIER||||287|LOC_Os01g10100|protein_coding|CODING|LOC_Os01g10100.2|1|1) FN780-S.SNP.1:5267825 chr01:005267825 0 W/5267825-5267825 FN780-S Single Base Substitution T-G INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3330-S.SNP.1:5268760 chr01:005268760 0 W/5268760-5268760 FN3330-S SNP C -> A AC=1;AN=184;BQB=0.417874;DP=2805;DP4=1117,1588,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.72299e-07;MQSB=0.939138;RPB=0.262848;SGB=42.7914;VDB=0.261829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.1:5268788 chr01:005268788 0 W/5268788-5268788 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.315493;DP=4116;DP4=2007,2063,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.30873e-08;MQSB=0.861789;RPB=0.892233;SGB=-58.653;VDB=0.0454826;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.1:5272553 chr01:005272553 0 W/5272553-5272553 FN-163 Single Base Substitution G-A INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2484.SNP.1:5272936 chr01:005272936 0 W/5272936-5272936 FN2484 SNP G -> A AC=1;AN=200;BQB=0.640599;DP=4921;DP4=2450,2258,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10294e-15;MQSB=0.6821;RPB=0.194597;SGB=109.527;VDB=0.521113;EFF=INTRON(MODIFIER||||565|LOC_Os01g10110|protein_coding|CODING|LOC_Os01g10110.1|2|1) FN563-S.SNP.1:5274477 chr01:005274477 0 W/5274477-5274477 FN563-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g10110 cytokinin dehydrogenase precursor, putative, expressed SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN873-S.SNP.1:5276866 chr01:005276866 0 W/5276866-5276866 FN873-S Single Base Substitution T-G INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN761-S.SNP.1:5279834 chr01:005279834 0 W/5279834-5279834 FN761-S Single Base Substitution A-T INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3714-S.SNP.1:5286007 chr01:005286007 0 W/5286007-5286007 FN3714-S SNP T -> A AC=1;AN=190;BQB=0.873892;DP=2827;DP4=1283,1424,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000353732;MQB=7.62065e-11;MQSB=0.944572;RPB=0.176445;SGB=71.6393;VDB=0.389912;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.1:5296555 chr01:005296555 0 W/5296555-5296555 FN-407 Single Base Substitution G-A INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.1:5296555 chr01:005296555 0 W/5296555-5296555 FN407-S Single Base Substitution G-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN3519-S.SNP.1:5297950 chr01:005297950 0 W/5297950-5297950 FN3519-S SNP C -> T AC=2;AN=188;BQB=0.77124;DP=2569;DP4=1209,1299,4,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.47425e-08;MQSB=0.961425;RPB=0.77203;SGB=62.6088;VDB=0.727171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.1:5306620 chr01:005306620 0 W/5306620-5306620 FN1476-S Single Base Substitution T-C INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3800-S.SNP.1:5309858 chr01:005309858 0 W/5309858-5309858 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.72599;DP=2313;DP4=1198,1046,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.90237e-10;MQSB=0.972834;RPB=0.974706;SGB=50.3161;VDB=0.958225;EFF=INTRON(MODIFIER||||582|LOC_Os01g10140|protein_coding|CODING|LOC_Os01g10140.2|9|1),INTRON(MODIFIER||||515|LOC_Os01g10140|protein_coding|CODING|LOC_Os01g10140.3|6|1) FN-72.SNP.1:5326889 chr01:005326889 0 W/5326889-5326889 FN-72 Single Base Substitution G-A INTERGENIC HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2621-S.SNP.1:5339650 chr01:005339650 0 W/5339650-5339650 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.509581;DP=8349;DP4=2821,4961,21,34;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.00023955;MQB=0.706522;MQSB=1.00354e-32;RPB=0.994267;SGB=128.481;VDB=0.00250114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G50D|75|LOC_Os01g10170|protein_coding|CODING|LOC_Os01g10170.1|2|1) FN973-S.SNP.1:5342844 chr01:005342844 0 W/5342844-5342844 FN973-S Single Base Substitution A-G INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3425-S.SNP.1:5347788 chr01:005347788 0 W/5347788-5347788 FN3425-S SNP C -> T AC=1;AN=184;BQB=0.998446;DP=3321;DP4=1970,1246,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00120446;MQB=4.60689e-07;MQSB=0.758546;RPB=0.982899;SGB=62.3078;VDB=0.86919;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.1:5359444 chr01:005359444 0 W/5359444-5359444 FN868-S Single Base Substitution G-T INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3763-S.SNP.1:5363254 chr01:005363254 0 W/5363254-5363254 FN3763-S SNP A -> T AC=1;AN=190;BQB=0.953761;DP=2592;DP4=1400,1128,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.45085e-06;MQSB=0.923394;RPB=0.481268;SGB=35.4339;VDB=0.342281;EFF=INTERGENIC(MODIFIER||||||||||1) FN-54.SNP.1:5363839 chr01:005363839 0 W/5363839-5363839 FN-54 Single Base Substitution G-A INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN1568-S.SNP.1:5364970 chr01:005364970 0 W/5364970-5364970 FN1568-S Single Base Substitution T-C INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2782-S.SNP.1:5372320 chr01:005372320 0 W/5372320-5372320 FN2782-S SNP A -> T AC=1;AN=198;BQB=0.996493;DP=4116;DP4=1940,1981,6,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.52344e-13;MQSB=0.999238;RPB=0.715072;SGB=90.9049;VDB=0.0589828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.1:5373458 chr01:005373458 0 W/5373458-5373458 FN-166 Single Base Substitution A-T INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-166.SNP.1:5373459 chr01:005373459 0 W/5373459-5373459 FN-166 Single Base Substitution G-T INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3490-S.SNP.1:5375274 chr01:005375274 0 W/5375274-5375274 FN3490-S SNP G -> A AC=2;AN=184;BQB=0.677264;DP=2831;DP4=1295,1391,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.30982e-16;MQSB=0.923929;RPB=0.284681;SGB=102.662;VDB=0.246529;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.1:5380565 chr01:005380565 0 W/5380565-5380565 FN-158 Single Base Substitution A-G INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1024-S.SNP.1:5384481 chr01:005384481 0 W/5384481-5384481 FN1024-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-380.SNP.1:5387588 chr01:005387588 0 W/5387588-5387588 FN-380 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN-268.SNP.1:5399902 chr01:005399902 0 W/5399902-5399902 FN-268 Single Base Substitution C-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2151-S.SNP.1:5404845 chr01:005404845 0 W/5404845-5404845 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.0102645;DP=3004;DP4=1816,948,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00044017;MQSB=0.0981702;RPB=0.974631;SGB=-112.21;VDB=0.0842967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.1:5411035 chr01:005411035 0 W/5411035-5411035 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.977499;DP=4038;DP4=1868,1878,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.48783e-13;MQSB=0.952751;RPB=0.705894;SGB=65.676;VDB=0.418645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H526N|631|LOC_Os01g10280|protein_coding|CODING|LOC_Os01g10280.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H524N|629|LOC_Os01g10280|protein_coding|CODING|LOC_Os01g10280.2|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H524N|539|LOC_Os01g10280|protein_coding|CODING|LOC_Os01g10280.3|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H524N|539|LOC_Os01g10280|protein_coding|CODING|LOC_Os01g10280.4|13|1) FN2397.SNP.1:5414691 chr01:005414691 0 W/5414691-5414691 FN2397 SNP G -> A AC=2;AN=200;BQB=0.677046;DP=5549;DP4=2802,2405,26,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14785e-23;MQSB=0.996625;RPB=0.844472;SGB=-45.1863;VDB=0.295534;EFF=INTRON(MODIFIER||||316|LOC_Os01g10290|protein_coding|CODING|LOC_Os01g10290.1|8|1),INTRON(MODIFIER||||316|LOC_Os01g10290|protein_coding|CODING|LOC_Os01g10290.2|7|1) FN-348.SNP.1:5424010 chr01:005424010 0 W/5424010-5424010 FN-348 Single Base Substitution G-A INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1281-S.SNP.1:5428087 chr01:005428087 0 W/5428087-5428087 FN1281-S Single Base Substitution C-T INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN4190-S.SNP.1:5431652 chr01:005431652 0 W/5431652-5431652 FN4190-S SNP T -> A AC=1;AN=170;BQB=0.995803;DP=2641;DP4=1199,1214,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.37428e-05;MQSB=0.999996;RPB=0.857249;SGB=0.00451649;VDB=0.568959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.1:5431653 chr01:005431653 0 W/5431653-5431653 FN1278-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2337.SNP.1:5431653 chr01:005431653 0 W/5431653-5431653 FN2337 SNP A -> T AC=1;AN=192;BQB=0.314141;DP=4597;DP4=1980,2262,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.91505e-07;MQSB=0.934649;RPB=0.895068;SGB=-37.0704;VDB=0.161238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.1:5431653 chr01:005431653 0 W/5431653-5431653 FN3450-S SNP A -> T AC=1;AN=184;BQB=0.928428;DP=2999;DP4=1208,1552,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75631e-09;MQSB=0.943576;RPB=0.567929;SGB=-15.2358;VDB=0.813301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.1:5431653 chr01:005431653 0 W/5431653-5431653 FN3535-S SNP A -> T AC=2;AN=188;BQB=0.871089;DP=3271;DP4=1302,1763,10,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.98837e-08;MQSB=0.815445;RPB=0.705985;SGB=-11.74;VDB=0.478414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.1:5431653 chr01:005431653 0 W/5431653-5431653 FN3899-S SNP A -> T AC=1;AN=158;BQB=0.998652;DP=2534;DP4=1131,1220,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65493e-08;MQSB=0.902602;RPB=0.583298;SGB=-17.277;VDB=0.445855;EFF=INTERGENIC(MODIFIER||||||||||1) FN1719-S.SNP.1:5432574 chr01:005432574 0 W/5432574-5432574 FN1719-S SNP T -> A AC=1;AN=188;BQB=0.974164;DP=3876;DP4=1919,1933,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.79232e-06;MQSB=0.887717;RPB=0.308558;SGB=35.9843;VDB=0.542886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.1:5435992 chr01:005435992 0 W/5435992-5435992 FN3733-S SNP A -> C AC=2;AN=190;BQB=0.954611;DP=2826;DP4=1418,1290,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.5824e-13;MQSB=0.86501;RPB=0.848344;SGB=112.85;VDB=0.634588;EFF=INTRON(MODIFIER||||262|LOC_Os01g10340|protein_coding|CODING|LOC_Os01g10340.1|9|1) FN4088-S.SNP.1:5438496 chr01:005438496 0 W/5438496-5438496 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.967608;DP=2676;DP4=1231,1378,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.7505e-06;MQSB=0.996272;RPB=0.803845;SGB=44.1115;VDB=0.100991;EFF=INTRON(MODIFIER||||262|LOC_Os01g10340|protein_coding|CODING|LOC_Os01g10340.1|5|1) FN2080-S.SNP.1:5439574 chr01:005439574 0 W/5439574-5439574 FN2080-S SNP T -> A AC=2;AN=168;BQB=0.886122;DP=3907;DP4=1891,1958,17,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.27672e-23;MQSB=0.884602;RPB=0.661275;SGB=48.546;VDB=0.0289484;EFF=INTRON(MODIFIER||||262|LOC_Os01g10340|protein_coding|CODING|LOC_Os01g10340.1|4|1) FN1553-S.SNP.1:5448932 chr01:005448932 0 W/5448932-5448932 FN1553-S Single Base Substitution C-A INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2209-S.SNP.1:5459181 chr01:005459181 0 W/5459181-5459181 FN2209-S SNP A -> G AC=1;AN=190;BQB=0.902414;DP=5318;DP4=2923,2073,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0069575;MQB=8.6434e-08;MQSB=1.24558e-16;RPB=0.682719;SGB=85.5263;VDB=0.205716;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.1:5463610 chr01:005463610 0 W/5463610-5463610 FN1701-S SNP T -> G AC=1;AN=188;BQB=0.268742;DP=3733;DP4=2055,1644,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000267881;MQB=5.91422e-09;MQSB=0.0701461;RPB=0.771701;SGB=14.798;VDB=0.388147;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.1:5465178 chr01:005465178 0 W/5465178-5465178 FN983-S Single Base Substitution C-T INTRON HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3503-S.SNP.1:5465432 chr01:005465432 0 W/5465432-5465432 FN3503-S SNP C -> T AC=1;AN=188;BQB=0.938666;DP=2761;DP4=1454,1254,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0702644;MQB=0.677059;MQSB=1.34846e-29;RPB=0.717015;SGB=18.2682;VDB=0.589678;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N373|1003|LOC_Os01g10380|protein_coding|CODING|LOC_Os01g10380.1|3|1) FN2442.SNP.1:5465578 chr01:005465578 0 W/5465578-5465578 FN2442 SNP G -> A AC=1;AN=200;BQB=0.996298;DP=4421;DP4=2170,2020,7,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0384528;MQB=0.507947;MQSB=0;RPB=0.989675;SGB=32.0901;VDB=0.361542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G422D|1003|LOC_Os01g10380|protein_coding|CODING|LOC_Os01g10380.1|3|1) FN1685-S.SNP.1:5471281 chr01:005471281 0 W/5471281-5471281 FN1685-S SNP G -> A AC=1;AN=188;BQB=0.561684;DP=2389;DP4=1204,1138,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0929259;MQB=0.142732;MQSB=8.70026e-15;RPB=0.668458;SGB=-57.5324;VDB=0.564943;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E327|836|LOC_Os01g10390|protein_coding|CODING|LOC_Os01g10390.1|2|1) FN1685-S.SNP.1:5471282 chr01:005471282 0 W/5471282-5471282 FN1685-S SNP C -> A AC=1;AN=188;BQB=0.79618;DP=2420;DP4=1221,1153,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0929752;MQB=0.130108;MQSB=9.93181e-16;RPB=0.917265;SGB=44.4357;VDB=0.164715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L328I|836|LOC_Os01g10390|protein_coding|CODING|LOC_Os01g10390.1|2|1) FN1701-S.SNP.1:5471860 chr01:005471860 0 W/5471860-5471860 FN1701-S SNP T -> A AC=1;AN=188;BQB=0.455973;DP=1804;DP4=753,982,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.0246634;MQSB=0.322662;RPB=0.390318;SGB=8.27326;VDB=0.422292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S489T|836|LOC_Os01g10390|protein_coding|CODING|LOC_Os01g10390.1|3|1) FN3845-S.SNP.1:5472123 chr01:005472123 0 W/5472123-5472123 FN3845-S SNP G -> A AC=1;AN=190;BQB=0.764138;DP=3567;DP4=1998,1380,16,17;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0894309;MQB=0.126581;MQSB=1.4013e-45;RPB=0.451989;SGB=107.178;VDB=0.368139;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K576|836|LOC_Os01g10390|protein_coding|CODING|LOC_Os01g10390.1|3|1) W427-1-1.SNP.1:5474462 chr01:005474462 0 W/5474462-5474462 W427-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2429.SNP.1:5474896 chr01:005474896 0 W/5474896-5474896 FN2429 SNP G -> A AC=1;AN=200;BQB=0.77539;DP=4772;DP4=2147,2225,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209556;MQB=1.71638e-12;MQSB=5.80714e-06;RPB=0.343564;SGB=94.3471;VDB=0.84492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.1:5479396 chr01:005479396 0 W/5479396-5479396 FN3981-S SNP G -> T AC=2;AN=168;BQB=0.738213;DP=2698;DP4=1489,1079,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.5361e-16;MQSB=0.995015;RPB=0.643848;SGB=123.066;VDB=0.296093;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R68L|105|LOC_Os01g10400|protein_coding|CODING|LOC_Os01g10400.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G44C|60|LOC_Os01g10400|protein_coding|CODING|LOC_Os01g10400.2|3|1) FN1099-S.SNP.1:5486497 chr01:005486497 0 W/5486497-5486497 FN1099-S Single Base Substitution C-A INTRON HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN959-S.SNP.1:5486531 chr01:005486531 0 W/5486531-5486531 FN959-S Single Base Substitution T-C INTRON HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN959-S.SNP.1:5486599 chr01:005486599 0 W/5486599-5486599 FN959-S Single Base Substitution A-T INTRON HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1106-S.SNP.1:5487189 chr01:005487189 0 W/5487189-5487189 FN1106-S Single Base Substitution A-G INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN462-S.SNP.1:5490219 chr01:005490219 0 W/5490219-5490219 FN462-S Single Base Substitution A-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN-231.SNP.1:5492806 chr01:005492806 0 W/5492806-5492806 FN-231 Single Base Substitution G-T INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-377.SNP.1:5500233 chr01:005500233 0 W/5500233-5500233 FN-377 Single Base Substitution A-G INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN553-S.SNP.1:5511192 chr01:005511192 0 W/5511192-5511192 FN553-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os01g10450 protein kinase domain containing protein, expressed SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2472.SNP.1:5520909 chr01:005520909 0 W/5520909-5520909 FN2472 SNP A -> G AC=1;AN=200;BQB=0.76312;DP=5173;DP4=2248,2632,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74898e-14;MQSB=0.803508;RPB=0.934591;SGB=58.1418;VDB=0.392992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.1:5545233 chr01:005545233 0 W/5545233-5545233 FN3416-S SNP C -> T AC=2;AN=184;BQB=0.941284;DP=2302;DP4=1163,1062,13,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.93942e-13;MQSB=0.724746;RPB=0.889126;SGB=89.4385;VDB=0.770166;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.1:5545723 chr01:005545723 0 W/5545723-5545723 FN-178 Single Base Substitution A-G INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN922-S.SNP.1:5546175 chr01:005546175 0 W/5546175-5546175 FN922-S Single Base Substitution G-A INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3514-S.SNP.1:5547274 chr01:005547274 0 W/5547274-5547274 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.989614;DP=2406;DP4=1065,1253,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53151e-06;MQSB=0.0153091;RPB=0.643815;SGB=25.3545;VDB=0.237603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.1:5547276 chr01:005547276 0 W/5547276-5547276 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.94147;DP=2409;DP4=1075,1224,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.12479e-06;MQSB=0.0460317;RPB=0.623797;SGB=35.3493;VDB=0.245164;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.1:5548088 chr01:005548088 0 W/5548088-5548088 FN1079-S Single Base Substitution C-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN2141-S.SNP.1:5554806 chr01:005554806 0 W/5554806-5554806 FN2141-S SNP A -> G AC=1;AN=168;BQB=0.33053;DP=3678;DP4=1645,2007,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.03316e-09;MQSB=0.984726;RPB=0.492468;SGB=-92.9238;VDB=0.251031;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.1:5555862 chr01:005555862 0 W/5555862-5555862 FN3965-S SNP T -> G AC=2;AN=168;BQB=0.924204;DP=1982;DP4=995,822,25,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.38168e-21;MQSB=0.903062;RPB=0.992868;SGB=111.042;VDB=0.592651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.1:5566092 chr01:005566092 0 W/5566092-5566092 FN3057-S SNP C -> G AC=1;AN=184;BQB=0.943007;DP=2580;DP4=1319,1199,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50943e-09;MQSB=0.930668;RPB=0.723846;SGB=62.3078;VDB=0.304631;EFF=INTRON(MODIFIER||||287|LOC_Os01g10504|protein_coding|CODING|LOC_Os01g10504.1|2|1),INTRON(MODIFIER||||276|LOC_Os01g10504|protein_coding|CODING|LOC_Os01g10504.2|2|1),INTRON(MODIFIER||||276|LOC_Os01g10504|protein_coding|CODING|LOC_Os01g10504.3|2|1) FN-298.SNP.1:5578348 chr01:005578348 0 W/5578348-5578348 FN-298 Single Base Substitution C-T INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN4050-S.SNP.1:5584190 chr01:005584190 0 W/5584190-5584190 FN4050-S SNP G -> A AC=1;AN=168;BQB=0.999634;DP=2429;DP4=1209,1101,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68105e-10;MQSB=0.668769;RPB=0.668995;SGB=55.3328;VDB=0.609751;EFF=INTRON(MODIFIER||||769|LOC_Os01g10520|protein_coding|CODING|LOC_Os01g10520.1|2|1) FN1252-S.SNP.1:5585468 chr01:005585468 0 W/5585468-5585468 FN1252-S Single Base Substitution T-C INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3858-S.SNP.1:5585933 chr01:005585933 0 W/5585933-5585933 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.989646;DP=2566;DP4=1224,1230,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.51402e-06;MQSB=0.845773;RPB=0.919048;SGB=47.0672;VDB=0.411244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.1:5587510 chr01:005587510 0 W/5587510-5587510 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. W385-6-8-4.SNP.1:5591533 chr01:005591533 0 W/5591533-5591533 W385-6-8-4 Single Base Substitution G-A INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN751-S.SNP.1:5593603 chr01:005593603 0 W/5593603-5593603 FN751-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN4032-S.SNP.1:5601568 chr01:005601568 0 W/5601568-5601568 FN4032-S SNP T -> G AC=1;AN=168;BQB=0.946394;DP=2374;DP4=1162,1126,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.57914e-07;MQSB=0.930534;RPB=0.999813;SGB=24.4556;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.1:5604893 chr01:005604893 0 W/5604893-5604893 FN1464-S Single Base Substitution C-T INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2411.SNP.1:5606740 chr01:005606740 0 W/5606740-5606740 FN2411 SNP G -> A AC=1;AN=200;BQB=0.991966;DP=4626;DP4=2206,2085,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21798e-14;MQSB=0.351982;RPB=0.965761;SGB=76.3213;VDB=0.590239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.1:5610753 chr01:005610753 0 W/5610753-5610753 FN3778-S SNP T -> A AC=1;AN=190;BQB=0.972391;DP=2737;DP4=1190,1451,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40295e-12;MQSB=0.833994;RPB=0.134475;SGB=85.5263;VDB=0.847724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.1:5617289 chr01:005617289 0 W/5617289-5617289 FN2375 SNP G -> A AC=1;AN=192;BQB=0.251514;DP=4614;DP4=2266,1839,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.129389;MQB=0.8954;MQSB=0;RPB=0.889439;SGB=81.1609;VDB=0.47151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.1:5632700 chr01:005632700 0 W/5632700-5632700 FN3877-S SNP G -> A AC=1;AN=158;BQB=0.995641;DP=2640;DP4=1111,1395,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.79376e-07;MQSB=0.954127;RPB=0.993851;SGB=34.0735;VDB=0.621197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.1:5635333 chr01:005635333 0 W/5635333-5635333 FN1117-S Single Base Substitution G-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2591-S.SNP.1:5639664 chr01:005639664 0 W/5639664-5639664 FN2591-S SNP A -> T AC=1;AN=186;BQB=0.839556;DP=1944;DP4=742,1079,2,6;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=0.00123595;MQSB=0.000581069;RPB=0.865074;SGB=18.5788;VDB=0.224313;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.1:5640828 chr01:005640828 0 W/5640828-5640828 FN4039-S SNP G -> C AC=1;AN=168;BQB=0.206396;DP=2225;DP4=1010,1023,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000126237;MQSB=0.497956;RPB=0.287618;SGB=17.3231;VDB=0.0702663;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S267|357|LOC_Os01g10580|protein_coding|CODING|LOC_Os01g10580.1|2|1) FN1622-S.SNP.1:5642793 chr01:005642793 0 W/5642793-5642793 FN1622-S Single Base Substitution C-A INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN-145.SNP.1:5650968 chr01:005650968 0 W/5650968-5650968 FN-145 Single Base Substitution G-A INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN260-S.SNP.1:5653663 chr01:005653663 0 W/5653663-5653663 FN260-S Single Base Substitution G-A INTRON HOMO SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN1086-S.SNP.1:5658829 chr01:005658829 0 W/5658829-5658829 FN1086-S Single Base Substitution T-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN980-S.SNP.1:5663674 chr01:005663674 0 W/5663674-5663674 FN980-S Single Base Substitution C-A INTRON HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1737-S.SNP.1:5665142 chr01:005665142 0 W/5665142-5665142 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.657631;DP=3658;DP4=1362,2219,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.34376e-10;MQSB=0.998742;RPB=0.990578;SGB=36.2493;VDB=0.407747;EFF=INTRON(MODIFIER||||369|LOC_Os01g10600|protein_coding|CODING|LOC_Os01g10600.1|4|1) FN3883-S.SNP.1:5667277 chr01:005667277 0 W/5667277-5667277 FN3883-S SNP C -> A AC=1;AN=158;BQB=0.878901;DP=2459;DP4=1230,1134,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.1996e-09;MQSB=0.00308459;RPB=0.748133;SGB=50.9207;VDB=0.493575;EFF=INTRON(MODIFIER||||369|LOC_Os01g10600|protein_coding|CODING|LOC_Os01g10600.1|2|1) FN3883-S.SNP.1:5667278 chr01:005667278 0 W/5667278-5667278 FN3883-S SNP T -> A AC=1;AN=158;BQB=0.70567;DP=2464;DP4=1225,1131,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.02622e-10;MQSB=0.00275501;RPB=0.665424;SGB=57.6596;VDB=0.758048;EFF=INTRON(MODIFIER||||369|LOC_Os01g10600|protein_coding|CODING|LOC_Os01g10600.1|2|1) FN2665-S.SNP.1:5671382 chr01:005671382 0 W/5671382-5671382 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.932955;DP=4212;DP4=2058,1892,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58098e-10;MQSB=0.231549;RPB=0.545322;SGB=72.7161;VDB=0.648513;EFF=UTR_5_PRIME(MODIFIER||53||365|LOC_Os01g10610|protein_coding|CODING|LOC_Os01g10610.1|1|1) FN569-S.SNP.1:5678795 chr01:005678795 0 W/5678795-5678795 FN569-S Single Base Substitution G-A INTRON HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN1175-S.SNP.1:5684221 chr01:005684221 0 W/5684221-5684221 FN1175-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1212-S.SNP.1:5684422 chr01:005684422 0 W/5684422-5684422 FN1212-S Single Base Substitution T-C INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN-149.SNP.1:5686503 chr01:005686503 0 W/5686503-5686503 FN-149 Single Base Substitution G-T INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1719-S.SNP.1:5712164 chr01:005712164 0 W/5712164-5712164 FN1719-S SNP T -> C AC=1;AN=188;BQB=0.615585;DP=3772;DP4=1987,1762,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.14176e-09;MQSB=0.986561;RPB=0.573819;SGB=26.0762;VDB=0.134026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.1:5715340 chr01:005715340 0 W/5715340-5715340 FN1003-S Single Base Substitution T-G INTERGENIC HOMO SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN2752-S.SNP.1:5734781 chr01:005734781 0 W/5734781-5734781 FN2752-S SNP T -> C AC=1;AN=200;BQB=0.820563;DP=4923;DP4=2370,2391,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.79085e-12;MQSB=0.85174;RPB=0.936522;SGB=54.6902;VDB=0.616794;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.1:5735058 chr01:005735058 0 W/5735058-5735058 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2481.SNP.1:5736347 chr01:005736347 0 W/5736347-5736347 FN2481 SNP C -> T AC=1;AN=200;BQB=0.371592;DP=4743;DP4=2298,2208,5,5;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0457516;MQB=0.997333;MQSB=0;RPB=0.78249;SGB=25.849;VDB=0.751563;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1118|1133|LOC_Os01g10720|protein_coding|CODING|LOC_Os01g10720.1|5|1) FN3866-S.SNP.1:5739864 chr01:005739864 0 W/5739864-5739864 FN3866-S SNP A -> G AC=1;AN=158;BQB=0.900332;DP=2322;DP4=1167,1054,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0297158;MQB=0.663568;MQSB=4.20493e-09;RPB=0.925828;SGB=55.806;VDB=0.58437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F179S|1133|LOC_Os01g10720|protein_coding|CODING|LOC_Os01g10720.1|3|1) FN-191.SNP.1:5740844 chr01:005740844 0 W/5740844-5740844 FN-191 Single Base Substitution G-A INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1520-S.SNP.1:5742858 chr01:005742858 0 W/5742858-5742858 FN1520-S Single Base Substitution G-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN425-S.SNP.1:5744517 chr01:005744517 0 W/5744517-5744517 FN425-S Single Base Substitution A-G INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. W554-1-1.SNP.1:5745505 chr01:005745505 0 W/5745505-5745505 W554-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN918-S.SNP.1:5751721 chr01:005751721 0 W/5751721-5751721 FN918-S Single Base Substitution C-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2291.SNP.1:5753719 chr01:005753719 0 W/5753719-5753719 FN2291 SNP C -> T AC=1;AN=192;BQB=0.991062;DP=5022;DP4=2543,2133,22,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.40285e-19;MQSB=0.809922;RPB=0.412148;SGB=87.8939;VDB=0.324839;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.1:5754626 chr01:005754626 0 W/5754626-5754626 FN462-S Single Base Substitution C-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN4202-S.SNP.1:5755738 chr01:005755738 0 W/5755738-5755738 FN4202-S SNP A -> C AC=2;AN=170;BQB=0.495587;DP=1919;DP4=901,945,21,28;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00156331;MQB=3.17092e-16;MQSB=0.755229;RPB=0.999947;SGB=206.829;VDB=0.502137;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.1:5763631 chr01:005763631 0 W/5763631-5763631 FN1566-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2619-S.SNP.1:5769797 chr01:005769797 0 W/5769797-5769797 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.879849;DP=4084;DP4=1692,2146,17,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.5674e-16;MQSB=0.171869;RPB=0.410771;SGB=115.647;VDB=0.535385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.1:5770627 chr01:005770627 0 W/5770627-5770627 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.985373;DP=3256;DP4=1338,1723,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.50047e-18;MQSB=0.973638;RPB=0.861638;SGB=135.619;VDB=0.907981;EFF=INTRON(MODIFIER||||182|LOC_Os01g10820|protein_coding|CODING|LOC_Os01g10820.1|2|1) FN2255-S.SNP.1:5781005 chr01:005781005 0 W/5781005-5781005 FN2255-S SNP A -> G AC=1;AN=190;BQB=0.98965;DP=4749;DP4=1841,2632,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.5471e-10;MQSB=0.0488121;RPB=0.983319;SGB=71.8647;VDB=0.226216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.1:5784022 chr01:005784022 0 W/5784022-5784022 FN3743-S SNP G -> C AC=1;AN=190;BQB=0.857757;DP=3166;DP4=1528,1454,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44743e-08;MQSB=0.991192;RPB=0.614241;SGB=15.9981;VDB=0.916585;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.1:5787958 chr01:005787958 0 W/5787958-5787958 FN475-S Single Base Substitution G-A INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2121-S.SNP.1:5792475 chr01:005792475 0 W/5792475-5792475 FN2121-S SNP T -> A AC=2;AN=168;BQB=0.323529;DP=2939;DP4=1791,1070,28,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.66606e-14;MQSB=0.75601;RPB=0.216078;SGB=-180.025;VDB=0.827063;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.1:5806870 chr01:005806870 0 W/5806870-5806870 FN2381 SNP G -> A AC=1;AN=192;BQB=0.290228;DP=4171;DP4=1969,1921,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.20303e-06;MQSB=0.442043;RPB=0.808791;SGB=32.6514;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.1:5807467 chr01:005807467 0 W/5807467-5807467 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.0193866;DP=3088;DP4=1623,1009,15,2;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000323834;MQB=0.0105363;MQSB=1.56574e-05;RPB=0.989963;SGB=50.9344;VDB=0.910402;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.1:5807579 chr01:005807579 0 W/5807579-5807579 FN950-S Single Base Substitution A-G INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-399.SNP.1:5814002 chr01:005814002 0 W/5814002-5814002 FN-399 Single Base Substitution T-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.1:5814002 chr01:005814002 0 W/5814002-5814002 FN399-S Single Base Substitution T-A INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2292.SNP.1:5819380 chr01:005819380 0 W/5819380-5819380 FN2292 SNP G -> A AC=1;AN=192;BQB=0.970604;DP=4148;DP4=1958,1845,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00024108;MQB=1.40353e-06;MQSB=8.30124e-07;RPB=0.103593;SGB=90.2896;VDB=0.283636;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.1:5819841 chr01:005819841 0 W/5819841-5819841 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN_789-3-1.SNP.1:5859975 chr01:005859975 0 W/5859975-5859975 FN_789-3-1 Single Base Substitution A-G INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN764-S.SNP.1:5861971 chr01:005861971 0 W/5861971-5861971 FN764-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g10990 integral membrane protein DUF6 containing protein, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2463.SNP.1:5863604 chr01:005863604 0 W/5863604-5863604 FN2463 SNP T -> C AC=1;AN=200;BQB=0.533821;DP=5340;DP4=2709,2257,10,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000269501;MQSB=0.00191342;RPB=0.69936;SGB=40.2696;VDB=0.611175;EFF=UTR_3_PRIME(MODIFIER||161||376|LOC_Os01g10990|protein_coding|CODING|LOC_Os01g10990.1|3|1) FN425-S.SNP.1:5864740 chr01:005864740 0 W/5864740-5864740 FN425-S Single Base Substitution C-A INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN4088-S.SNP.1:5880666 chr01:005880666 0 W/5880666-5880666 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.812385;DP=3247;DP4=1548,1630,8,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.76547e-10;MQSB=0.978353;RPB=0.952508;SGB=89.2199;VDB=0.58312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.1:5883585 chr01:005883585 0 W/5883585-5883585 FN3845-S SNP T -> A AC=1;AN=190;BQB=0.91565;DP=3045;DP4=1613,1313,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68197e-10;MQSB=0.999997;RPB=0.99954;SGB=85.5263;VDB=0.204831;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.1:5885182 chr01:005885182 0 W/5885182-5885182 FN-102 Single Base Substitution T-G INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2617-S.SNP.1:5893430 chr01:005893430 0 W/5893430-5893430 FN2617-S SNP T -> A AC=1;AN=198;BQB=0.78021;DP=4254;DP4=2009,2011,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66874e-11;MQSB=0.992472;RPB=0.593394;SGB=54.5295;VDB=0.668172;EFF=INTRON(MODIFIER||||1334|LOC_Os01g11040|protein_coding|CODING|LOC_Os01g11040.1|4|1) FN3310-S.SNP.1:5896544 chr01:005896544 0 W/5896544-5896544 FN3310-S SNP G -> C AC=2;AN=184;BQB=0.761318;DP=2672;DP4=1335,1231,19,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4555e-17;MQSB=0.880385;RPB=0.864248;SGB=148.222;VDB=0.528403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G1139R|1334|LOC_Os01g11040|protein_coding|CODING|LOC_Os01g11040.1|6|1) W464-2-1.SNP.1:5896774 chr01:005896774 0 W/5896774-5896774 W464-2-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2324.SNP.1:5903487 chr01:005903487 0 W/5903487-5903487 FN2324 SNP G -> A AC=1;AN=192;BQB=0.946533;DP=5216;DP4=2363,2557,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.81967e-09;MQSB=0.0732306;RPB=0.629929;SGB=81.1609;VDB=0.251757;EFF=INTRON(MODIFIER||||1014|LOC_Os01g11054|protein_coding|CODING|LOC_Os01g11054.1|6|1) FN764-S.SNP.1:5904841 chr01:005904841 0 W/5904841-5904841 FN764-S Single Base Substitution C-A INTRON HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN505-S.SNP.1:5905242 chr01:005905242 0 W/5905242-5905242 FN505-S Single Base Substitution G-A START_GAINED HET LOC_Os01g11054 phosphoenolpyruvate carboxylase, putative, expressed SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN579-S.SNP.1:5906184 chr01:005906184 0 W/5906184-5906184 FN579-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN438-S.SNP.1:5907055 chr01:005907055 0 W/5907055-5907055 FN438-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g11054 phosphoenolpyruvate carboxylase, putative, expressed SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN747-S.SNP.1:5917413 chr01:005917413 0 W/5917413-5917413 FN747-S Single Base Substitution G-A INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN497-S.SNP.1:5918512 chr01:005918512 0 W/5918512-5918512 FN497-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g11080 transposable element protein, putative, containing Pfam profile: PF03732, Retrotrans_gag, expressed SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3368-S.SNP.1:5920147 chr01:005920147 0 W/5920147-5920147 FN3368-S SNP A -> C AC=1;AN=184;BQB=0.9261;DP=2801;DP4=1348,1361,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.5976e-06;MQSB=0.996809;RPB=0.0573161;SGB=21.6609;VDB=0.0941654;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.1:5920304 chr01:005920304 0 W/5920304-5920304 FN576-S Single Base Substitution A-G INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1535-S.SNP.1:5920820 chr01:005920820 0 W/5920820-5920820 FN1535-S Single Base Substitution A-T INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN-208.SNP.1:5923059 chr01:005923059 0 W/5923059-5923059 FN-208 Single Base Substitution A-G INTRON HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2487.SNP.1:5939004 chr01:005939004 0 W/5939004-5939004 FN2487 SNP C -> A AC=1;AN=200;BQB=0.46678;DP=4390;DP4=2061,2007,17,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99914e-10;MQSB=0.164957;RPB=0.862744;SGB=42.5108;VDB=0.29674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G82C|308|LOC_Os01g11120|protein_coding|CODING|LOC_Os01g11120.1|1|1) FN1527-S.SNP.1:5946678 chr01:005946678 0 W/5946678-5946678 FN1527-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2598-S.SNP.1:5956082 chr01:005956082 0 W/5956082-5956082 FN2598-S SNP A -> T AC=1;AN=198;BQB=0.94837;DP=4327;DP4=2093,1931,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.19337e-09;MQSB=0.998216;RPB=0.478203;SGB=9.3494;VDB=0.64913;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.1:5956624 chr01:005956624 0 W/5956624-5956624 FN964-S Single Base Substitution C-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN457-S.SNP.1:5958074 chr01:005958074 0 W/5958074-5958074 FN457-S Single Base Substitution A-C INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3332-S.SNP.1:5962279 chr01:005962279 0 W/5962279-5962279 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.99903;DP=3615;DP4=1706,1817,17,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.505e-16;MQSB=0.993253;RPB=0.994246;SGB=56.0583;VDB=0.26012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S156L|1220|LOC_Os01g11140|protein_coding|CODING|LOC_Os01g11140.1|2|1) FN1340-S.SNP.1:5964114 chr01:005964114 0 W/5964114-5964114 FN1340-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1280-S.SNP.1:5969967 chr01:005969967 0 W/5969967-5969967 FN1280-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN598-S.SNP.1:5982728 chr01:005982728 0 W/5982728-5982728 FN598-S Single Base Substitution C-T INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN1423-S.SNP.1:5985911 chr01:005985911 0 W/5985911-5985911 FN1423-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-316.SNP.1:5987617 chr01:005987617 0 W/5987617-5987617 FN-316 Single Base Substitution A-G INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN389-S.SNP.1:5990995 chr01:005990995 0 W/5990995-5990995 FN389-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g11170 expressed protein SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-285.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN-285 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1197-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN1197-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1278-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN1278-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2572-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN2572-S SNP C -> T AC=2;AN=198;BQB=0.953066;DP=3876;DP4=1524,1951,22,30;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.44791e-20;MQSB=0.948658;RPB=0.813865;SGB=233.354;VDB=0.259359;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V24|118|LOC_Os01g11190|protein_coding|CODING|LOC_Os01g11190.1|2|1) FN2572-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN2572-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3450-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN3450-S SNP C -> T AC=2;AN=184;BQB=0.666971;DP=3241;DP4=1554,1522,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.56775e-17;MQSB=0.976646;RPB=0.997407;SGB=85.0529;VDB=0.770477;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V24|118|LOC_Os01g11190|protein_coding|CODING|LOC_Os01g11190.1|2|1) FN4087-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN4087-S SNP C -> T AC=2;AN=182;BQB=0.986022;DP=2980;DP4=1349,1510,3,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.83955e-08;MQSB=0.988929;RPB=0.88619;SGB=57.644;VDB=0.935098;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V24|118|LOC_Os01g11190|protein_coding|CODING|LOC_Os01g11190.1|2|1) FN4161-S.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN4161-S SNP C -> T AC=2;AN=170;BQB=0.785497;DP=2496;DP4=1084,1269,15,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.49345e-19;MQSB=0.999232;RPB=0.879002;SGB=141.168;VDB=0.363303;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V24|118|LOC_Os01g11190|protein_coding|CODING|LOC_Os01g11190.1|2|1) FN_772-3-1.SNP.1:5995170 chr01:005995170 0 W/5995170-5995170 FN_772-3-1 Single Base Substitution C-T Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1434-S.SNP.1:5995376 chr01:005995376 0 W/5995376-5995376 FN1434-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g11190 expressed protein SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2686-S.SNP.1:6003036 chr01:006003036 0 W/6003036-6003036 FN2686-S SNP T -> A AC=2;AN=200;BQB=0.99756;DP=4921;DP4=2489,2223,17,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.51606e-18;MQSB=0.936871;RPB=0.999902;SGB=132.552;VDB=0.413332;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.1:6016343 chr01:006016343 0 W/6016343-6016343 FN2440 SNP G -> T AC=1;AN=200;BQB=0.977171;DP=4556;DP4=2284,2036,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07427e-12;MQSB=0.855499;RPB=0.562358;SGB=-11.8999;VDB=0.012242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.1:6022572 chr01:006022572 0 W/6022572-6022572 FN1353-S Single Base Substitution T-A INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2128-S.SNP.1:6043006 chr01:006043006 0 W/6043006-6043006 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.0388521;DP=3382;DP4=1639,1710,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13734e-06;MQSB=0.939199;RPB=0.822242;SGB=-38.9357;VDB=0.973326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.1:6050475 chr01:006050475 0 W/6050475-6050475 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2195-S.SNP.1:6050475 chr01:006050475 0 W/6050475-6050475 FN2195-S SNP G -> A AC=2;AN=190;BQB=0.810683;DP=3879;DP4=1824,1790,20,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.17626e-14;MQSB=0.520925;RPB=0.650567;SGB=64.5217;VDB=0.492017;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.1:6050475 chr01:006050475 0 W/6050475-6050475 FN_552-1-1 Single Base Substitution G-A Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1758-S.SNP.1:6056349 chr01:006056349 0 W/6056349-6056349 FN1758-S SNP T -> A AC=1;AN=188;BQB=0.85371;DP=3934;DP4=2146,1740,12,16;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.000508388;MQB=0.529024;MQSB=5.77497e-08;RPB=0.496998;SGB=121.672;VDB=0.333921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.1:6056604 chr01:006056604 0 W/6056604-6056604 FN3668-S SNP A -> T AC=1;AN=190;BQB=0.861639;DP=2567;DP4=1449,1012,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00038956;MQB=2.8413e-05;MQSB=0.000383069;RPB=0.109148;SGB=8.33661;VDB=0.011201;EFF=INTERGENIC(MODIFIER||||||||||1) FN506-S.SNP.1:6057246 chr01:006057246 0 W/6057246-6057246 FN506-S Single Base Substitution A-T INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN803-S.SNP.1:6057485 chr01:006057485 0 W/6057485-6057485 FN803-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN3569-S.SNP.1:6058526 chr01:006058526 0 W/6058526-6058526 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.295763;DP=4545;DP4=1864,2608,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02839e-12;MQSB=0.954656;RPB=0.0968484;SGB=57.244;VDB=0.207039;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A143|504|LOC_Os01g11300|protein_coding|CODING|LOC_Os01g11300.1|1|1) FN3569-S.SNP.1:6058527 chr01:006058527 0 W/6058527-6058527 FN3569-S SNP G -> A AC=1;AN=188;BQB=0.997291;DP=4511;DP4=1841,2581,5,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39784e-12;MQSB=0.953349;RPB=0.0296341;SGB=60.7873;VDB=0.117317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A143V|504|LOC_Os01g11300|protein_coding|CODING|LOC_Os01g11300.1|1|1) FN3451-S.SNP.1:6063637 chr01:006063637 0 W/6063637-6063637 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.912002;DP=2845;DP4=1389,1381,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.19868e-06;MQSB=0.915615;RPB=0.997168;SGB=21.6609;VDB=0.904846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E100K|151|LOC_Os01g11310|protein_coding|CODING|LOC_Os01g11310.1|1|1) FN3694-S.SNP.1:6079553 chr01:006079553 0 W/6079553-6079553 FN3694-S SNP G -> T AC=1;AN=190;BQB=0.970061;DP=2968;DP4=1729,1090,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.00662e-06;MQSB=0.521521;RPB=0.466065;SGB=35.4339;VDB=0.30199;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.1:6083720 chr01:006083720 0 W/6083720-6083720 FN1356-S Single Base Substitution C-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2292.SNP.1:6087620 chr01:006087620 0 W/6087620-6087620 FN2292 SNP C -> T AC=1;AN=192;BQB=0.908556;DP=5054;DP4=2365,2461,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.47268e-17;MQSB=0.421628;RPB=0.87899;SGB=27.6913;VDB=0.534186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.1:6088196 chr01:006088196 0 W/6088196-6088196 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.919804;DP=2887;DP4=1392,1396,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.31982e-08;MQSB=0.991486;RPB=0.236229;SGB=51.4366;VDB=0.378858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.1:6098068 chr01:006098068 0 W/6098068-6098068 FN2687-S SNP C -> T AC=2;AN=200;BQB=0.864848;DP=4759;DP4=2286,1931,4,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000210128;MQB=2.9979e-05;MQSB=8.22573e-11;RPB=0.764723;SGB=33.0593;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.1:6098068 chr01:006098068 0 W/6098068-6098068 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.684412;DP=2432;DP4=1005,1083,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.31232e-06;MQSB=0.0363146;RPB=0.301254;SGB=47.0672;VDB=0.00826316;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.1:6099334 chr01:006099334 0 W/6099334-6099334 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN3356-S.SNP.1:6104311 chr01:006104311 0 W/6104311-6104311 FN3356-S SNP G -> T AC=1;AN=184;BQB=0.993355;DP=3053;DP4=1503,1467,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.77085e-11;MQSB=0.799314;RPB=0.820872;SGB=80.3949;VDB=0.304478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.1:6104311 chr01:006104311 0 W/6104311-6104311 FN3714-S SNP G -> T AC=1;AN=190;BQB=0.775635;DP=2751;DP4=1387,1274,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.39371e-13;MQSB=0.99626;RPB=0.999385;SGB=60.9777;VDB=0.940103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.1:6106686 chr01:006106686 0 W/6106686-6106686 FN3381-S SNP A -> G AC=1;AN=184;BQB=0.963345;DP=2685;DP4=1259,1366,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.26869e-08;MQSB=0.973833;RPB=0.927819;SGB=42.7914;VDB=0.118547;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.1:6108875 chr01:006108875 0 W/6108875-6108875 FN1134-S Single Base Substitution G-T INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2688-S.SNP.1:6111639 chr01:006111639 0 W/6111639-6111639 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.976835;DP=4693;DP4=2392,2041,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5524e-07;MQSB=0.838573;RPB=0.810087;SGB=63.4749;VDB=0.981362;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.1:6113702 chr01:006113702 0 W/6113702-6113702 FN3390-S SNP C -> A AC=2;AN=184;BQB=0.843575;DP=2897;DP4=1159,1613,7,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.97883e-09;MQSB=0.978877;RPB=0.796267;SGB=75.8731;VDB=0.794297;EFF=INTRON(MODIFIER||||700|LOC_Os01g11370|protein_coding|CODING|LOC_Os01g11370.1|2|1) FN862-S.SNP.1:6114295 chr01:006114295 0 W/6114295-6114295 FN862-S Single Base Substitution A-G INTRON HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2098-S.SNP.1:6119299 chr01:006119299 0 W/6119299-6119299 FN2098-S SNP A -> G AC=1;AN=168;BQB=0.0451511;DP=3472;DP4=1434,1970,16,29;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.53114e-20;MQSB=0.998854;RPB=0.962512;SGB=-102.59;VDB=0.370637;EFF=INTRON(MODIFIER||||700|LOC_Os01g11370|protein_coding|CODING|LOC_Os01g11370.1|14|1) FN2433.SNP.1:6127955 chr01:006127955 0 W/6127955-6127955 FN2433 SNP T -> C AC=2;AN=200;BQB=0.911945;DP=4701;DP4=2252,2106,23,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.14145e-28;MQSB=0.987349;RPB=0.991807;SGB=191.687;VDB=0.533388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.1:6132442 chr01:006132442 0 W/6132442-6132442 FN2740-S SNP C -> G AC=1;AN=200;BQB=0.435688;DP=4598;DP4=2144,2196,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.56474e-16;MQSB=0.960558;RPB=0.703491;SGB=-40.0535;VDB=0.457367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V21L|70|LOC_Os01g11400|protein_coding|CODING|LOC_Os01g11400.1|1|1) FN2653-S.SNP.1:6140844 chr01:006140844 0 W/6140844-6140844 FN2653-S SNP G -> T AC=1;AN=200;BQB=0.831034;DP=4266;DP4=2042,1985,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.19765e-12;MQSB=0.871441;RPB=0.166994;SGB=65.5058;VDB=0.0268209;EFF=SPLICE_SITE_REGION(LOW||||345|LOC_Os01g11430|protein_coding|CODING|LOC_Os01g11430.1|2|1),INTRON(MODIFIER||||345|LOC_Os01g11430|protein_coding|CODING|LOC_Os01g11430.1|2|1) FN3521-S.SNP.1:6141042 chr01:006141042 0 W/6141042-6141042 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.159536;DP=3263;DP4=1549,1588,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02198e-05;MQSB=0.899233;RPB=0.892042;SGB=20.9896;VDB=0.715481;EFF=INTRON(MODIFIER||||345|LOC_Os01g11430|protein_coding|CODING|LOC_Os01g11430.1|1|1) FN1122-S.SNP.1:6151617 chr01:006151617 0 W/6151617-6151617 FN1122-S Single Base Substitution C-A INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2609-S.SNP.1:6173528 chr01:006173528 0 W/6173528-6173528 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.932197;DP=4452;DP4=2293,1843,25,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.24616e-18;MQSB=0.440652;RPB=0.542028;SGB=83.8419;VDB=0.0558505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.1:6174666 chr01:006174666 0 W/6174666-6174666 FN2355 SNP T -> G AC=1;AN=192;BQB=0.00469774;DP=3743;DP4=1146,1698,17,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.00845672;MQSB=0.0729894;RPB=0.119664;SGB=-286.409;VDB=0.00286736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.1:6178812 chr01:006178812 0 W/6178812-6178812 FN3597-S SNP C -> A AC=2;AN=188;BQB=0.748967;DP=2678;DP4=1274,1270,15,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.1465e-14;MQSB=0.991749;RPB=0.917819;SGB=56.5957;VDB=0.871729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.1:6180108 chr01:006180108 0 W/6180108-6180108 FN1610-S Single Base Substitution A-G INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3455-S.SNP.1:6192897 chr01:006192897 0 W/6192897-6192897 FN3455-S SNP G -> C AC=2;AN=184;BQB=0.997768;DP=3059;DP4=1414,1546,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.58229e-13;MQSB=0.965597;RPB=0.564999;SGB=103.004;VDB=0.0293253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Cta|V323L|604|LOC_Os01g11510|protein_coding|CODING|LOC_Os01g11510.1|1|1) FN-206.SNP.1:6197176 chr01:006197176 0 W/6197176-6197176 FN-206 Single Base Substitution T-G INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3388-S.SNP.1:6204160 chr01:006204160 0 W/6204160-6204160 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.985681;DP=2897;DP4=1504,1301,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13878e-06;MQSB=0.992558;RPB=0.936851;SGB=48.7425;VDB=0.769043;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.1:6213131 chr01:006213131 0 W/6213131-6213131 FN-96 Single Base Substitution A-G INTERGENIC HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN4154-S.SNP.1:6213914 chr01:006213914 0 W/6213914-6213914 FN4154-S SNP C -> G AC=1;AN=170;BQB=0.887405;DP=2322;DP4=1149,1121,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.37494e-06;MQSB=0.992686;RPB=0.173842;SGB=34.5445;VDB=0.439579;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.1:6234434 chr01:006234434 0 W/6234434-6234434 FN2318 SNP C -> T AC=2;AN=192;BQB=0.131225;DP=4230;DP4=1736,2151,18,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.30087e-23;MQSB=0.26201;RPB=0.408504;SGB=146.71;VDB=0.365813;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.1:6237547 chr01:006237547 0 W/6237547-6237547 FN4088-S SNP T -> C AC=1;AN=182;BQB=0.908346;DP=2819;DP4=1487,1217,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.46549e-10;MQSB=0.967467;RPB=0.600049;SGB=23.1441;VDB=0.0776398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.1:6251959 chr01:006251959 0 W/6251959-6251959 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.96103;DP=4217;DP4=2056,1928,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.17559e-09;MQSB=0.506932;RPB=0.991843;SGB=37.1297;VDB=0.970104;EFF=INTRON(MODIFIER||||355|LOC_Os01g11580|protein_coding|CODING|LOC_Os01g11580.1|4|1),INTRON(MODIFIER||||220|LOC_Os01g11580|protein_coding|CODING|LOC_Os01g11580.2|4|1) FN1027-S.SNP.1:6253233 chr01:006253233 0 W/6253233-6253233 FN1027-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1027-S.SNP.1:6253234 chr01:006253234 0 W/6253234-6253234 FN1027-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3769-S.SNP.1:6262096 chr01:006262096 0 W/6262096-6262096 FN3769-S SNP C -> T AC=1;AN=190;BQB=0.963058;DP=3046;DP4=1641,1268,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03573e-06;MQSB=0.923257;RPB=0.467809;SGB=10.8904;VDB=0.524155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.1:6263252 chr01:006263252 0 W/6263252-6263252 FN1337-S Single Base Substitution C-G INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN378-S.SNP.1:6266590 chr01:006266590 0 W/6266590-6266590 FN378-S Single Base Substitution G-T INTERGENIC HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN1124-S.SNP.1:6280259 chr01:006280259 0 W/6280259-6280259 FN1124-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN961-S.SNP.1:6282139 chr01:006282139 0 W/6282139-6282139 FN961-S Single Base Substitution G-C INTRON HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3767-S.SNP.1:6284008 chr01:006284008 0 W/6284008-6284008 FN3767-S SNP A -> T AC=2;AN=190;BQB=0.798083;DP=2894;DP4=1490,1319,9,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=2.31542e-07;MQSB=0.268146;RPB=0.877997;SGB=90.0802;VDB=0.982141;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.1:6289971 chr01:006289971 0 W/6289971-6289971 FN909-S Single Base Substitution A-T INTRON HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2442.SNP.1:6308769 chr01:006308769 0 W/6308769-6308769 FN2442 SNP T -> A AC=1;AN=200;BQB=0.872676;DP=4952;DP4=2315,2484,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1262e-12;MQSB=0.0448546;RPB=0.645066;SGB=61.9006;VDB=0.764796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.1:6310911 chr01:006310911 0 W/6310911-6310911 FN1214-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN3766-S.SNP.1:6314014 chr01:006314014 0 W/6314014-6314014 FN3766-S SNP C -> T AC=2;AN=190;BQB=0.998217;DP=2549;DP4=1247,1172,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16214e-15;MQSB=0.957248;RPB=0.981017;SGB=85.8548;VDB=0.396128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.1:6314594 chr01:006314594 0 W/6314594-6314594 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.985949;DP=4641;DP4=2133,2250,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.41802e-14;MQSB=0.976169;RPB=0.910079;SGB=69.1109;VDB=0.691413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.1:6316391 chr01:006316391 0 W/6316391-6316391 FN-206 Single Base Substitution G-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3990-S.SNP.1:6317221 chr01:006317221 0 W/6317221-6317221 FN3990-S SNP G -> C AC=2;AN=168;BQB=0.986186;DP=2538;DP4=1179,1213,17,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.34621e-19;MQSB=0.999933;RPB=0.930975;SGB=63.5086;VDB=0.665712;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.1:6317582 chr01:006317582 0 W/6317582-6317582 FN-216 Single Base Substitution A-T INTERGENIC HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-52.SNP.1:6330260 chr01:006330260 0 W/6330260-6330260 FN-52 Single Base Substitution A-T INTRON HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. W472-5-1.SNP.1:6344550 chr01:006344550 0 W/6344550-6344550 W472-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2661-S.SNP.1:6349261 chr01:006349261 0 W/6349261-6349261 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.954759;DP=3997;DP4=1732,1934,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.70916e-08;MQSB=0.609605;RPB=0.676643;SGB=33.0593;VDB=0.391706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.1:6355912 chr01:006355912 0 W/6355912-6355912 FN2137-S SNP A -> T AC=1;AN=168;BQB=0.782005;DP=2958;DP4=1206,1715,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.51407e-10;MQSB=0.971366;RPB=0.909747;SGB=11.3448;VDB=0.803254;EFF=INTRON(MODIFIER||||386|LOC_Os01g11740|protein_coding|CODING|LOC_Os01g11740.1|4|1) FN536-S.SNP.1:6357510 chr01:006357510 0 W/6357510-6357510 FN536-S Single Base Substitution T-C INTRON HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN2646-S.SNP.1:6360742 chr01:006360742 0 W/6360742-6360742 FN2646-S SNP T -> A AC=2;AN=200;BQB=0.719856;DP=4485;DP4=2401,1883,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17879e-20;MQSB=0.999989;RPB=0.992492;SGB=115.978;VDB=0.943128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.1:6360856 chr01:006360856 0 W/6360856-6360856 FN2454 SNP A -> G AC=1;AN=200;BQB=0.851664;DP=5233;DP4=2338,2674,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000191095;MQB=1.19661e-08;MQSB=0.929983;RPB=0.968173;SGB=63.4749;VDB=0.712699;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.1:6362158 chr01:006362158 0 W/6362158-6362158 FN-216 Single Base Substitution T-A INTRON HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN939-S.SNP.1:6363796 chr01:006363796 0 W/6363796-6363796 FN939-S Single Base Substitution C-T INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2196-S.SNP.1:6364507 chr01:006364507 0 W/6364507-6364507 FN2196-S SNP T -> A AC=2;AN=190;BQB=0.26597;DP=4637;DP4=2312,2066,36,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.28734e-29;MQSB=0.104795;RPB=0.98337;SGB=254.02;VDB=0.0191361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.1:6371246 chr01:006371246 0 W/6371246-6371246 FN-259 Single Base Substitution A-T INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN3677-S.SNP.1:6372813 chr01:006372813 0 W/6372813-6372813 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.995857;DP=2616;DP4=1312,1222,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00229358;MQB=1.52108e-05;MQSB=0.678065;RPB=0.963737;SGB=32.5467;VDB=0.956295;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.1:6375782 chr01:006375782 0 W/6375782-6375782 FN689-S Single Base Substitution A-G INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1559-S.SNP.1:6378936 chr01:006378936 0 W/6378936-6378936 FN1559-S Single Base Substitution C-T INTRON Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1559-S.SNP.1:6378937 chr01:006378937 0 W/6378937-6378937 FN1559-S Single Base Substitution A-C INTRON Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3455-S.SNP.1:6390115 chr01:006390115 0 W/6390115-6390115 FN3455-S SNP A -> C AC=2;AN=184;BQB=0.963494;DP=3598;DP4=1323,1928,19,38;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.47458e-26;MQSB=0.997089;RPB=0.530624;SGB=48.8204;VDB=0.932168;EFF=INTRON(MODIFIER||||395|LOC_Os01g11810|protein_coding|CODING|LOC_Os01g11810.1|3|1),INTRON(MODIFIER||||376|LOC_Os01g11810|protein_coding|CODING|LOC_Os01g11810.2|2|1) FN467-S.SNP.1:6390385 chr01:006390385 0 W/6390385-6390385 FN467-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g11810 powdery mildew resistant protein 5, putative, expressed SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3701-S.SNP.1:6397195 chr01:006397195 0 W/6397195-6397195 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.978197;DP=3200;DP4=1613,1429,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.44879e-11;MQSB=0.979341;RPB=0.958331;SGB=71.8647;VDB=0.357874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D34N|349|LOC_Os01g11830|protein_coding|CODING|LOC_Os01g11830.1|1|1) FN260-S.SNP.1:6403141 chr01:006403141 0 W/6403141-6403141 FN260-S Single Base Substitution G-A INTRON HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN322-S.SNP.1:6411185 chr01:006411185 0 W/6411185-6411185 FN322-S Single Base Substitution G-A INTERGENIC HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN1079-S.SNP.1:6411394 chr01:006411394 0 W/6411394-6411394 FN1079-S Single Base Substitution C-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1625-S.SNP.1:6413835 chr01:006413835 0 W/6413835-6413835 FN1625-S Single Base Substitution G-A INTRON HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:6413835 chr01:006413835 0 W/6413835-6413835 FN1626-S SNP G -> A AC=1;AN=188;BQB=0.598643;DP=3239;DP4=1744,1449,25,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23454e-14;MQSB=0.897126;RPB=0.9989;SGB=-7.39363;VDB=0.788837;EFF=INTRON(MODIFIER||||395|LOC_Os01g11860|protein_coding|CODING|LOC_Os01g11860.1|3|1) FN3368-S.SNP.1:6416828 chr01:006416828 0 W/6416828-6416828 FN3368-S SNP C -> A AC=1;AN=184;BQB=0.89209;DP=3236;DP4=1455,1669,18,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19573e-14;MQSB=0.873819;RPB=0.695457;SGB=51.0148;VDB=0.975046;EFF=INTRON(MODIFIER||||395|LOC_Os01g11860|protein_coding|CODING|LOC_Os01g11860.1|4|1) FN2243-S.SNP.1:6418307 chr01:006418307 0 W/6418307-6418307 FN2243-S SNP G -> A AC=2;AN=190;BQB=0.431081;DP=4727;DP4=1939,2436,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.42663e-17;MQSB=0.732669;RPB=0.714576;SGB=100.07;VDB=0.071936;EFF=INTRON(MODIFIER||||395|LOC_Os01g11860|protein_coding|CODING|LOC_Os01g11860.1|4|1) FN2634-S.SNP.1:6418307 chr01:006418307 0 W/6418307-6418307 FN2634-S SNP G -> A AC=2;AN=200;BQB=0.981364;DP=4776;DP4=2032,2450,20,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.29246e-25;MQSB=0.982537;RPB=0.66754;SGB=112.85;VDB=0.19021;EFF=INTRON(MODIFIER||||395|LOC_Os01g11860|protein_coding|CODING|LOC_Os01g11860.1|4|1) FN2155-S.SNP.1:6418812 chr01:006418812 0 W/6418812-6418812 FN2155-S SNP A -> T AC=1;AN=168;BQB=0.00353899;DP=2207;DP4=1422,747,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.012398;MQSB=0.447162;RPB=0.972562;SGB=-101.503;VDB=0.934447;EFF=INTRON(MODIFIER||||395|LOC_Os01g11860|protein_coding|CODING|LOC_Os01g11860.1|5|1) FN2177-S.SNP.1:6422101 chr01:006422101 0 W/6422101-6422101 FN2177-S SNP T -> C AC=2;AN=168;BQB=0.157831;DP=2006;DP4=655,1319,5,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.6353e-05;MQSB=0.999839;RPB=0.596358;SGB=-37.7974;VDB=0.5892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:6422101 chr01:006422101 0 W/6422101-6422101 FN3360-S SNP T -> C AC=2;AN=184;BQB=0.995116;DP=2993;DP4=1284,1494,21,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.96275e-18;MQSB=0.760937;RPB=0.26927;SGB=73.7109;VDB=0.0839171;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.1:6427332 chr01:006427332 0 W/6427332-6427332 FN-213 Single Base Substitution G-T INTRON HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3760-S.SNP.1:6427494 chr01:006427494 0 W/6427494-6427494 FN3760-S SNP T -> A AC=2;AN=190;BQB=0.983678;DP=2780;DP4=1375,1319,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000359712;MQB=4.35396e-18;MQSB=0.887167;RPB=0.72259;SGB=140.173;VDB=0.297884;EFF=INTRON(MODIFIER||||166|LOC_Os01g11870|protein_coding|CODING|LOC_Os01g11870.1|4|1) FN3388-S.SNP.1:6430414 chr01:006430414 0 W/6430414-6430414 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.894405;DP=3485;DP4=1445,1926,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.45125e-07;MQSB=0.721197;RPB=0.988686;SGB=57.786;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3942-S.SNP.1:6433988 chr01:006433988 0 W/6433988-6433988 FN3942-S SNP A -> G AC=1;AN=168;BQB=0.734332;DP=2825;DP4=1249,1433,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.09385e-08;MQSB=0.99081;RPB=0.975015;SGB=-14.9417;VDB=0.188295;EFF=INTRON(MODIFIER||||428|LOC_Os01g11880|protein_coding|CODING|LOC_Os01g11880.1|3|1) FN2540-S.SNP.1:6442797 chr01:006442797 0 W/6442797-6442797 FN2540-S SNP G -> A AC=2;AN=198;BQB=0.995999;DP=4106;DP4=1884,1986,25,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.02419e-25;MQSB=0.995586;RPB=0.922599;SGB=201.188;VDB=0.30414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.1:6447656 chr01:006447656 0 W/6447656-6447656 FN1492-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os01g11900 hhH-GPD superfamily base excision DNA repair protein, expressed SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1445-S.SNP.1:6456067 chr01:006456067 0 W/6456067-6456067 FN1445-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN4145-S.SNP.1:6458180 chr01:006458180 0 W/6458180-6458180 FN4145-S SNP C -> G AC=1;AN=170;BQB=0.898996;DP=2213;DP4=1178,980,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000734768;MQSB=0.995793;RPB=0.645321;SGB=25.6601;VDB=0.462061;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.1:6474880 chr01:006474880 0 W/6474880-6474880 FN-308 Single Base Substitution G-A INTRON HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN691-S.SNP.1:6497456 chr01:006497456 0 W/6497456-6497456 FN691-S Single Base Substitution C-T INTRON HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2578-S.SNP.1:6498262 chr01:006498262 0 W/6498262-6498262 FN2578-S SNP C -> T AC=2;AN=198;BQB=0.540534;DP=4390;DP4=2091,2077,14,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.81936e-15;MQSB=0.742466;RPB=0.703967;SGB=26.8957;VDB=0.297488;EFF=INTRON(MODIFIER||||276|LOC_Os01g11940|protein_coding|CODING|LOC_Os01g11940.1|2|1) FN-299.SNP.1:6501056 chr01:006501056 0 W/6501056-6501056 FN-299 Single Base Substitution G-C UTR_3_PRIME HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-379.SNP.1:6504043 chr01:006504043 0 W/6504043-6504043 FN-379 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g11946 ABC transporter, ATP-binding protein, putative, expressed SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN3570-S.SNP.1:6508172 chr01:006508172 0 W/6508172-6508172 FN3570-S SNP T -> C AC=1;AN=190;BQB=0.86382;DP=2894;DP4=1493,1309,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82657e-08;MQSB=0.96624;RPB=0.998913;SGB=39.6545;VDB=0.461652;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S908G|991|LOC_Os01g11952|protein_coding|CODING|LOC_Os01g11952.1|21|1) FN2640-S.SNP.1:6508286 chr01:006508286 0 W/6508286-6508286 FN2640-S SNP T -> A AC=2;AN=200;BQB=0.909921;DP=4954;DP4=2330,2350,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.90357e-25;MQSB=0.996248;RPB=0.200047;SGB=51.2243;VDB=0.648473;EFF=INTRON(MODIFIER||||991|LOC_Os01g11952|protein_coding|CODING|LOC_Os01g11952.1|20|1) FN624-S.SNP.1:6517416 chr01:006517416 0 W/6517416-6517416 FN624-S Single Base Substitution G-A INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN624-S.SNP.1:6517422 chr01:006517422 0 W/6517422-6517422 FN624-S Single Base Substitution C-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2639-S.SNP.1:6521983 chr01:006521983 0 W/6521983-6521983 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.949986;DP=4630;DP4=2151,2260,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57316e-13;MQSB=0.996721;RPB=0.992765;SGB=79.9264;VDB=0.2148;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.1:6522882 chr01:006522882 0 W/6522882-6522882 FN3784-S SNP A -> G AC=1;AN=190;BQB=0.915918;DP=2559;DP4=1305,1166,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.66873e-07;MQSB=0.999044;RPB=0.0825017;SGB=25.439;VDB=0.064934;EFF=INTERGENIC(MODIFIER||||||||||1) 707-1.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-1 Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1469, Mutant_ID: 707-1, Generation: M2, Mutations: 41, Genes: 34, Seed availability: Yes. 707-2.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-2 Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. 707-3.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-3 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1471, Mutant_ID: 707-3, Generation: M2, Mutations: 34, Genes: 31, Seed availability: Yes. 707-4.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-4 Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. 707-6.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-6 Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. 707-7.SNP.1:6534939 chr01:006534939 0 W/6534939-6534939 707-7 Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN2482.SNP.1:6537798 chr01:006537798 0 W/6537798-6537798 FN2482 SNP C -> T AC=1;AN=200;BQB=0.726392;DP=4090;DP4=1747,2050,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54519e-05;MQSB=0.990683;RPB=0.695014;SGB=25.849;VDB=0.170536;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E33|80|LOC_Os01g12010|protein_coding|CODING|LOC_Os01g12010.1|1|1) FN4145-S.SNP.1:6538405 chr01:006538405 0 W/6538405-6538405 FN4145-S SNP C -> T AC=1;AN=170;BQB=0.999714;DP=1870;DP4=1212,578,10,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39949e-07;MQSB=0.190877;RPB=0.944517;SGB=47.8722;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.1:6543466 chr01:006543466 0 W/6543466-6543466 FN-392 Single Base Substitution T-C INTRON HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN3477-S.SNP.1:6544063 chr01:006544063 0 W/6544063-6544063 FN3477-S SNP G -> T AC=1;AN=184;BQB=0.885942;DP=3674;DP4=1456,2142,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.87993e-08;MQSB=0.803285;RPB=0.664954;SGB=66.8296;VDB=0.712842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D94E|640|LOC_Os01g12030|protein_coding|CODING|LOC_Os01g12030.1|2|1) FN3576-S.SNP.1:6553196 chr01:006553196 0 W/6553196-6553196 FN3576-S SNP G -> C AC=1;AN=188;BQB=0.977246;DP=2784;DP4=1373,1365,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=11;MQ0F=0.494612;MQB=0.00548961;MQSB=1.41508e-23;RPB=0.302579;SGB=50.1574;VDB=0.471609;EFF=INTRON(MODIFIER||||1581|LOC_Os01g12040|protein_coding|CODING|LOC_Os01g12040.1|11|1) FN3711-S.SNP.1:6561569 chr01:006561569 0 W/6561569-6561569 FN3711-S SNP C -> A AC=1;AN=190;BQB=0.994024;DP=2460;DP4=1393,962,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99046e-07;MQSB=0.864456;RPB=0.874334;SGB=28.9929;VDB=0.296572;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.1:6567405 chr01:006567405 0 W/6567405-6567405 FN482-S Single Base Substitution A-T INTRON HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN852-S.SNP.1:6572858 chr01:006572858 0 W/6572858-6572858 FN852-S Single Base Substitution A-T INTRON HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN927-S.SNP.1:6577898 chr01:006577898 0 W/6577898-6577898 FN927-S Single Base Substitution C-G INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. W472-5-1.SNP.1:6583412 chr01:006583412 0 W/6583412-6583412 W472-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN956-S.SNP.1:6586900 chr01:006586900 0 W/6586900-6586900 FN956-S Single Base Substitution C-T INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3488-S.SNP.1:6590181 chr01:006590181 0 W/6590181-6590181 FN3488-S SNP T -> C AC=1;AN=184;BQB=0.85145;DP=2392;DP4=1085,1245,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000225456;MQSB=0.936636;RPB=0.928164;SGB=30.6558;VDB=0.923913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.1:6595368 chr01:006595368 0 W/6595368-6595368 FN1445-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1470-S.SNP.1:6597992 chr01:006597992 0 W/6597992-6597992 FN1470-S Single Base Substitution C-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2321.SNP.1:6600669 chr01:006600669 0 W/6600669-6600669 FN2321 SNP C -> A AC=2;AN=192;BQB=0.84026;DP=4263;DP4=1388,2514,13,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.82066e-25;MQSB=0.762802;RPB=0.711657;SGB=157.404;VDB=0.95428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.1:6602734 chr01:006602734 0 W/6602734-6602734 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.999964;DP=5045;DP4=2634,2069,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.796e-10;MQSB=0.995835;RPB=0.783181;SGB=29.4849;VDB=0.363131;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.1:6603405 chr01:006603405 0 W/6603405-6603405 FN1624-S Single Base Substitution T-G INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN3705-S.SNP.1:6622670 chr01:006622670 0 W/6622670-6622670 FN3705-S SNP G -> A AC=1;AN=190;BQB=0.985885;DP=2403;DP4=1065,1255,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.96846e-06;MQSB=0.999239;RPB=0.810051;SGB=44.5415;VDB=0.652385;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.1:6634082 chr01:006634082 0 W/6634082-6634082 FN-377 Single Base Substitution T-A INTRON HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN2163-S.SNP.1:6640440 chr01:006640440 0 W/6640440-6640440 FN2163-S SNP G -> C AC=1;AN=168;BQB=0.992818;DP=3434;DP4=1555,1844,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.16182e-11;MQSB=0.684996;RPB=0.290492;SGB=34.3388;VDB=0.631571;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.1:6641284 chr01:006641284 0 W/6641284-6641284 FN-294 Single Base Substitution G-A INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3615-S.SNP.1:6641291 chr01:006641291 0 W/6641291-6641291 FN3615-S SNP T -> C AC=1;AN=190;BQB=0.968172;DP=2670;DP4=1159,1407,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.33743e-09;MQSB=0.926946;RPB=0.262315;SGB=58.2031;VDB=0.158752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.1:6641879 chr01:006641879 0 W/6641879-6641879 FN2191-S SNP A -> G AC=1;AN=190;BQB=0.370771;DP=4823;DP4=2457,2072,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00020734;MQB=1.8649e-06;MQSB=0.0647496;RPB=0.686811;SGB=49.0954;VDB=0.26042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.1:6643119 chr01:006643119 0 W/6643119-6643119 FN3574-S SNP C -> T AC=2;AN=188;BQB=0.993686;DP=2545;DP4=1231,1181,13,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.45646e-17;MQSB=0.992099;RPB=0.676005;SGB=96.2203;VDB=0.648919;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G449D|494|LOC_Os01g12180|protein_coding|CODING|LOC_Os01g12180.1|2|1) FN2240-S.SNP.1:6648054 chr01:006648054 0 W/6648054-6648054 FN2240-S SNP T -> C AC=2;AN=190;BQB=0.905344;DP=3843;DP4=1704,1742,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.16855e-12;MQSB=0.731868;RPB=0.675541;SGB=78.7471;VDB=0.751633;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.1:6658299 chr01:006658299 0 W/6658299-6658299 FN-129 Single Base Substitution T-C INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3728-S.SNP.1:6660767 chr01:006660767 0 W/6660767-6660767 FN3728-S SNP G -> A AC=2;AN=190;BQB=0.728458;DP=2930;DP4=1214,1614,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.61811e-19;MQSB=0.939117;RPB=0.73828;SGB=67.0756;VDB=0.7791;EFF=INTRON(MODIFIER||||524|LOC_Os01g12210|protein_coding|CODING|LOC_Os01g12210.1|5|1) FN2688-S.SNP.1:6665535 chr01:006665535 0 W/6665535-6665535 FN2688-S SNP G -> T AC=1;AN=200;BQB=0.971205;DP=4860;DP4=2315,2327,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.39154e-07;MQSB=0.996257;RPB=0.382811;SGB=-15.5309;VDB=0.0844444;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.1:6665536 chr01:006665536 0 W/6665536-6665536 FN2688-S SNP A -> T AC=1;AN=200;BQB=0.555802;DP=4847;DP4=2303,2319,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.00071e-07;MQSB=0.990759;RPB=0.0571579;SGB=33.0593;VDB=0.0902289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.1:6677786 chr01:006677786 0 W/6677786-6677786 FN2649-S SNP T -> A AC=1;AN=200;BQB=0.968124;DP=4984;DP4=2248,2454,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.56264e-13;MQSB=0.943153;RPB=0.656838;SGB=15.9106;VDB=0.260503;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.1:6678203 chr01:006678203 0 W/6678203-6678203 FN4184-S SNP T -> C AC=1;AN=170;BQB=0.983211;DP=2609;DP4=1249,1266,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.79548e-08;MQSB=0.99884;RPB=0.952577;SGB=47.8722;VDB=0.507257;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.1:6679067 chr01:006679067 0 W/6679067-6679067 FN742-S Single Base Substitution A-C INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3903-S.SNP.1:6682466 chr01:006682466 0 W/6682466-6682466 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.951216;DP=2590;DP4=1327,1168,15,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.14658e-10;MQSB=0.994489;RPB=0.784344;SGB=82.0227;VDB=0.738201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.1:6684462 chr01:006684462 0 W/6684462-6684462 FN2192-S SNP C -> G AC=1;AN=190;BQB=0.419687;DP=4441;DP4=2052,2046,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=4.12807e-08;MQSB=0.137284;RPB=0.912169;SGB=-9.34484;VDB=0.956061;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.1:6688311 chr01:006688311 0 W/6688311-6688311 FN1525-S Single Base Substitution G-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3576-S.SNP.1:6692565 chr01:006692565 0 W/6692565-6692565 FN3576-S SNP T -> C AC=2;AN=188;BQB=0.95659;DP=2549;DP4=1339,1108,16,10;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=9.80035e-10;MQSB=0.733182;RPB=0.498656;SGB=82.0471;VDB=0.785788;EFF=INTRON(MODIFIER||||127|LOC_Os01g12240|protein_coding|CODING|LOC_Os01g12240.1|3|1) FN3791-S.SNP.1:6696469 chr01:006696469 0 W/6696469-6696469 FN3791-S SNP T -> C AC=2;AN=190;BQB=0.741068;DP=2713;DP4=1529,1094,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.81983e-13;MQSB=0.974284;RPB=0.53889;SGB=60.9777;VDB=0.425347;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R88|349|LOC_Os01g12250|protein_coding|CODING|LOC_Os01g12250.1|1|1) FN-219.SNP.1:6698813 chr01:006698813 0 W/6698813-6698813 FN-219 Single Base Substitution A-T INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN3553-S.SNP.1:6708650 chr01:006708650 0 W/6708650-6708650 FN3553-S SNP A -> C AC=2;AN=188;BQB=0.786734;DP=2651;DP4=1287,1289,16,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.15916e-14;MQSB=0.991045;RPB=0.863204;SGB=96.2203;VDB=0.857781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S338A|721|LOC_Os01g12280|protein_coding|CODING|LOC_Os01g12280.1|2|1) FN4253-S.SNP.1:6711072 chr01:006711072 0 W/6711072-6711072 FN4253-S SNP G -> T AC=1;AN=170;BQB=0.79406;DP=2419;DP4=1197,1154,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00916e-05;MQSB=0.958382;RPB=0.129461;SGB=31.4354;VDB=0.617065;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.1:6715658 chr01:006715658 0 W/6715658-6715658 FN-304 Single Base Substitution G-T INTERGENIC HOMO SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN2581-S.SNP.1:6721491 chr01:006721491 0 W/6721491-6721491 FN2581-S SNP T -> C AC=2;AN=198;BQB=0.338015;DP=4407;DP4=2185,1965,9,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.16164e-12;MQSB=0.99638;RPB=0.832294;SGB=86.3098;VDB=0.300594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.1:6724281 chr01:006724281 0 W/6724281-6724281 FN2397 SNP C -> A AC=1;AN=200;BQB=0.802458;DP=4279;DP4=2268,1805,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14223e-06;MQSB=0.859243;RPB=0.967297;SGB=33.0593;VDB=0.519344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.1:6726360 chr01:006726360 0 W/6726360-6726360 FN2578-S SNP T -> C AC=2;AN=198;BQB=0.314191;DP=4274;DP4=2158,1812,12,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.58104e-12;MQSB=0.919468;RPB=0.88975;SGB=55.2955;VDB=0.69218;EFF=INTRON(MODIFIER||||379|LOC_Os01g12320|protein_coding|CODING|LOC_Os01g12320.1|4|1),INTRON(MODIFIER||||326|LOC_Os01g12320|protein_coding|CODING|LOC_Os01g12320.2|4|1),INTRON(MODIFIER||||149|LOC_Os01g12320|protein_coding|CODING|LOC_Os01g12320.3|1|1) FN2767-S.SNP.1:6735501 chr01:006735501 0 W/6735501-6735501 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.816819;DP=3931;DP4=2042,1665,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.72539e-12;MQSB=0.913104;RPB=0.756836;SGB=86.3098;VDB=0.524808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.1:6736032 chr01:006736032 0 W/6736032-6736032 FN2791-S SNP A -> T AC=1;AN=198;BQB=0.434942;DP=4483;DP4=2139,2031,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.4853e-08;MQSB=0.944954;RPB=0.999859;SGB=36.5539;VDB=0.83934;EFF=INTRON(MODIFIER||||2080|LOC_Os01g12340|protein_coding|CODING|LOC_Os01g12340.1|13|1) FN4072-S.SNP.1:6737154 chr01:006737154 0 W/6737154-6737154 FN4072-S SNP C -> T AC=1;AN=182;BQB=0.950845;DP=3394;DP4=1734,1571,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.140247;MQB=0.66916;MQSB=0.399682;RPB=0.946523;SGB=44.1115;VDB=0.0258627;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1857|2080|LOC_Os01g12340|protein_coding|CODING|LOC_Os01g12340.1|13|1) FN2222-S.SNP.1:6743728 chr01:006743728 0 W/6743728-6743728 FN2222-S SNP C -> A AC=1;AN=190;BQB=0.703598;DP=5319;DP4=2465,2426,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00488814;MQB=6.62355e-11;MQSB=0.151027;RPB=0.945835;SGB=61.9679;VDB=0.341435;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W663L|2080|LOC_Os01g12340|protein_coding|CODING|LOC_Os01g12340.1|3|1) FN1633-S.SNP.1:6748941 chr01:006748941 0 W/6748941-6748941 FN1633-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3474-S.SNP.1:6753742 chr01:006753742 0 W/6753742-6753742 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.430807;DP=3524;DP4=1738,1709,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0053916;MQB=0.000121788;MQSB=9.31832e-24;RPB=0.905412;SGB=62.3078;VDB=0.921663;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1233|2027|LOC_Os01g12360|protein_coding|CODING|LOC_Os01g12360.1|2|1) FN2691-S.SNP.1:6754899 chr01:006754899 0 W/6754899-6754899 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.923738;DP=4499;DP4=2310,1954,3,9;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0480107;MQB=0.148223;MQSB=0.000508789;RPB=0.957671;SGB=49.6594;VDB=0.723817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A848T|2027|LOC_Os01g12360|protein_coding|CODING|LOC_Os01g12360.1|2|1) FN3385-S.SNP.1:6769739 chr01:006769739 0 W/6769739-6769739 FN3385-S SNP A -> G AC=1;AN=184;BQB=0.548712;DP=3519;DP4=1717,1614,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000166585;MQSB=0.968977;RPB=0.576841;SGB=-3.85014;VDB=0.967056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L76P|641|LOC_Os01g12390|protein_coding|CODING|LOC_Os01g12390.1|1|1) FN3424-S.SNP.1:6772139 chr01:006772139 0 W/6772139-6772139 FN3424-S SNP T -> C AC=1;AN=184;BQB=0.96474;DP=3093;DP4=1116,1843,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.61457e-11;MQSB=0.999457;RPB=0.459191;SGB=9.8459;VDB=0.205665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:6783260 chr01:006783260 0 W/6783260-6783260 FN3815-S SNP G -> T AC=2;AN=190;BQB=0.966694;DP=2637;DP4=1297,1226,7,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.57131e-11;MQSB=0.961568;RPB=0.228308;SGB=38.983;VDB=0.0651942;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C316*|762|LOC_Os01g12410|protein_coding|CODING|LOC_Os01g12410.1|1|1) FN1106-S.SNP.1:6790348 chr01:006790348 0 W/6790348-6790348 FN1106-S Single Base Substitution T-C INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2084-S.SNP.1:6796453 chr01:006796453 0 W/6796453-6796453 FN2084-S SNP C -> T AC=1;AN=168;BQB=0.247613;DP=3748;DP4=1926,1758,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13839e-08;MQSB=0.871528;RPB=0.930585;SGB=-40.0741;VDB=0.554329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.1:6803079 chr01:006803079 0 W/6803079-6803079 FN2494 SNP T -> A AC=1;AN=200;BQB=0.229604;DP=4761;DP4=1956,2539,9,16;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0;MQB=9.18676e-07;MQSB=1.95844e-05;RPB=0.988596;SGB=109.527;VDB=0.042556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.1:6804463 chr01:006804463 0 W/6804463-6804463 FN1337-S Single Base Substitution G-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN351-S.SNP.1:6808840 chr01:006808840 0 W/6808840-6808840 FN351-S Single Base Substitution A-G INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN3879-S.SNP.1:6811604 chr01:006811604 0 W/6811604-6811604 FN3879-S SNP A -> T AC=1;AN=158;BQB=0.798982;DP=2250;DP4=1050,1130,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000219666;MQSB=0.899617;RPB=0.970192;SGB=51.4366;VDB=0.563312;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.1:6816563 chr01:006816563 0 W/6816563-6816563 FN687-S Single Base Substitution C-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3979-S.SNP.1:6816638 chr01:006816638 0 W/6816638-6816638 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.868909;DP=2438;DP4=1403,930,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.41054e-09;MQSB=0.999032;RPB=0.690164;SGB=22.1847;VDB=0.479999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.1:6819517 chr01:006819517 0 W/6819517-6819517 FN2449 SNP G -> C AC=2;AN=200;BQB=0.994426;DP=4412;DP4=1597,2534,19,18;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=3.35148e-09;MQSB=1.78361e-08;RPB=0.740862;SGB=39.9882;VDB=0.21326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-177.SNP.1:6835820 chr01:006835820 0 W/6835820-6835820 FN-177 Single Base Substitution G-T INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN-371.SNP.1:6836082 chr01:006836082 0 W/6836082-6836082 FN-371 Single Base Substitution G-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN701-S.SNP.1:6850716 chr01:006850716 0 W/6850716-6850716 FN701-S Single Base Substitution G-A INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN_789-2-1.SNP.1:6851425 chr01:006851425 0 W/6851425-6851425 FN_789-2-1 Single Base Substitution G-A HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2742-S.SNP.1:6854618 chr01:006854618 0 W/6854618-6854618 FN2742-S SNP C -> G AC=1;AN=200;BQB=0.993337;DP=4038;DP4=1762,2082,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28572e-07;MQSB=0.988874;RPB=0.92661;SGB=63.4749;VDB=0.273624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.1:6856244 chr01:006856244 0 W/6856244-6856244 FN3810-S SNP C -> A AC=1;AN=190;BQB=0.790962;DP=2747;DP4=1532,1116,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03722e-07;MQSB=0.980312;RPB=0.74817;SGB=-16.5452;VDB=0.863259;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.1:6858106 chr01:006858106 0 W/6858106-6858106 FN684-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g12490 flavin monooxygenase, putative, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN684-S.SNP.1:6858107 chr01:006858107 0 W/6858107-6858107 FN684-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g12490 flavin monooxygenase, putative, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN2497.SNP.1:6858869 chr01:006858869 0 W/6858869-6858869 FN2497 SNP C -> T AC=1;AN=200;BQB=0.731696;DP=5122;DP4=2279,2342,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51916e-09;MQSB=0.168254;RPB=0.07133;SGB=-12.5051;VDB=0.465123;EFF=INTRON(MODIFIER||||439|LOC_Os01g12490|protein_coding|CODING|LOC_Os01g12490.1|1|1) FN2333.SNP.1:6865103 chr01:006865103 0 W/6865103-6865103 FN2333 SNP G -> A AC=1;AN=192;BQB=0.944051;DP=5148;DP4=2317,2496,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000777001;MQB=7.85652e-12;MQSB=0.995624;RPB=0.40753;SGB=13.6122;VDB=0.682478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.1:6865394 chr01:006865394 0 W/6865394-6865394 FN-153 Single Base Substitution G-A INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-153.SNP.1:6865395 chr01:006865395 0 W/6865395-6865395 FN-153 Single Base Substitution G-A INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1295-S.SNP.1:6865631 chr01:006865631 0 W/6865631-6865631 FN1295-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4253-S.SNP.1:6867047 chr01:006867047 0 W/6867047-6867047 FN4253-S SNP C -> T AC=1;AN=170;BQB=0.945263;DP=2180;DP4=1068,1040,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000111185;MQSB=0.798818;RPB=0.878113;SGB=21.1076;VDB=0.922502;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.1:6870862 chr01:006870862 0 W/6870862-6870862 FN-350 Single Base Substitution T-C INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN185-2_3_4.SNP.1:6875482 chr01:006875482 0 W/6875482-6875482 FN185-2_3_4 SNP C -> T AC=1;AN=188;BQB=0.5131;DP=3383;DP4=1268,2075,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.86239e-07;MQSB=0.989798;RPB=0.907683;SGB=-14.4565;VDB=0.536368;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.1:6882925 chr01:006882925 0 W/6882925-6882925 FN1345-S Single Base Substitution G-A INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN628-S.SNP.1:6887778 chr01:006887778 0 W/6887778-6887778 FN628-S Single Base Substitution G-A INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-112.SNP.1:6889628 chr01:006889628 0 W/6889628-6889628 FN-112 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g12530 smr domain containing protein, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1499-S.SNP.1:6896979 chr01:006896979 0 W/6896979-6896979 FN1499-S Single Base Substitution C-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN993-S.SNP.1:6911808 chr01:006911808 0 W/6911808-6911808 FN993-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN497-S.SNP.1:6915066 chr01:006915066 0 W/6915066-6915066 FN497-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1410-S.SNP.1:6924758 chr01:006924758 0 W/6924758-6924758 FN1410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN690-S.SNP.1:6943553 chr01:006943553 0 W/6943553-6943553 FN690-S Single Base Substitution A-T INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN4077-S.SNP.1:6944843 chr01:006944843 0 W/6944843-6944843 FN4077-S SNP A -> T AC=1;AN=182;BQB=0.971626;DP=3146;DP4=1439,1622,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.28222e-08;MQSB=0.99679;RPB=0.974044;SGB=32.1169;VDB=0.960488;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.1:6944844 chr01:006944844 0 W/6944844-6944844 FN4077-S SNP T -> A AC=1;AN=182;BQB=0.961104;DP=3154;DP4=1435,1644,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.68684e-08;MQSB=0.995223;RPB=0.845785;SGB=44.1115;VDB=0.906218;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.1:6947416 chr01:006947416 0 W/6947416-6947416 FN4203-S SNP T -> A AC=1;AN=170;BQB=0.866877;DP=2853;DP4=1199,1539,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.95258e-07;MQSB=0.401363;RPB=0.885257;SGB=14.9986;VDB=0.0120479;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.1:6948760 chr01:006948760 0 W/6948760-6948760 FN3670-S SNP A -> G AC=1;AN=190;BQB=0.96623;DP=2485;DP4=1194,1203,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.3829e-08;MQSB=0.9952;RPB=0.908076;SGB=32.5467;VDB=0.993442;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.1:6950860 chr01:006950860 0 W/6950860-6950860 FN4206-S SNP T -> G AC=1;AN=170;BQB=0.956093;DP=2852;DP4=1248,1543,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46636e-05;MQSB=0.997574;RPB=0.733584;SGB=38.987;VDB=0.282458;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.1:6952290 chr01:006952290 0 W/6952290-6952290 FN837-S Single Base Substitution G-A INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2465.SNP.1:6952902 chr01:006952902 0 W/6952902-6952902 FN2465 SNP G -> A AC=1;AN=200;BQB=0.879452;DP=4985;DP4=2383,2275,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80969e-19;MQSB=0.569683;RPB=0.195228;SGB=71.1676;VDB=0.931073;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.1:6964963 chr01:006964963 0 W/6964963-6964963 FN718-S Single Base Substitution C-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN718-S.SNP.1:6964964 chr01:006964964 0 W/6964964-6964964 FN718-S Single Base Substitution G-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN3324-S.SNP.1:6969776 chr01:006969776 0 W/6969776-6969776 FN3324-S SNP A -> C AC=1;AN=184;BQB=0.763505;DP=2656;DP4=1308,1209,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0006477;MQSB=0.940171;RPB=0.326812;SGB=21.6609;VDB=0.476415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K278T|279|LOC_Os01g12650|protein_coding|CODING|LOC_Os01g12650.1|5|1) FN2223-S.SNP.1:6976049 chr01:006976049 0 W/6976049-6976049 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.96954;DP=4407;DP4=1731,2363,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27154e-12;MQSB=0.413268;RPB=0.59817;SGB=18.096;VDB=0.0803236;EFF=INTRON(MODIFIER||||840|LOC_Os01g12660|protein_coding|CODING|LOC_Os01g12660.1|1|1) FN-251.SNP.1:6979294 chr01:006979294 0 W/6979294-6979294 FN-251 Single Base Substitution T-A INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN-54.SNP.1:6988295 chr01:006988295 0 W/6988295-6988295 FN-54 Single Base Substitution C-T INTRON HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2429.SNP.1:6989650 chr01:006989650 0 W/6989650-6989650 FN2429 SNP T -> C AC=1;AN=200;BQB=0.709384;DP=4468;DP4=2059,2089,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000671441;MQB=7.84921e-07;MQSB=0.975485;RPB=0.496297;SGB=21.6694;VDB=0.541492;EFF=INTRON(MODIFIER||||618|LOC_Os01g12680|protein_coding|CODING|LOC_Os01g12680.4|1|1),INTRON(MODIFIER||||656|LOC_Os01g12680|protein_coding|CODING|LOC_Os01g12680.2|1|1) FN1376-S.SNP.1:6995810 chr01:006995810 0 W/6995810-6995810 FN1376-S Single Base Substitution A-G INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN319-S.SNP.1:6997824 chr01:006997824 0 W/6997824-6997824 FN319-S Single Base Substitution C-T INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN704-S.SNP.1:6998763 chr01:006998763 0 W/6998763-6998763 FN704-S Single Base Substitution T-C INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2780-S.SNP.1:7008018 chr01:007008018 0 W/7008018-7008018 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.854205;DP=3671;DP4=1902,1613,18,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.51675e-12;MQSB=5.86341e-06;RPB=0.693034;SGB=141.451;VDB=0.603537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.1:7008403 chr01:007008403 0 W/7008403-7008403 FN3782-S SNP G -> T AC=1;AN=190;BQB=0.375425;DP=2543;DP4=1214,1232,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.78808e-05;MQSB=0.895634;RPB=0.972953;SGB=43.2083;VDB=0.681863;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.1:7008403 chr01:007008403 0 W/7008403-7008403 FN576-S Single Base Substitution G-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN-359.SNP.1:7011507 chr01:007011507 0 W/7011507-7011507 FN-359 Single Base Substitution G-A INTERGENIC HOMO SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1520-S.SNP.1:7011799 chr01:007011799 0 W/7011799-7011799 FN1520-S Single Base Substitution T-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2166-S.SNP.1:7019838 chr01:007019838 0 W/7019838-7019838 FN2166-S SNP T -> A AC=1;AN=168;BQB=0.024975;DP=2465;DP4=1322,1080,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000424741;MQSB=0.828154;RPB=0.717199;SGB=-35.5206;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.1:7023688 chr01:007023688 0 W/7023688-7023688 FN4183-S SNP T -> A AC=1;AN=170;BQB=0.975409;DP=2219;DP4=907,1162,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.15421e-07;MQSB=0.883542;RPB=0.977777;SGB=56.7575;VDB=0.2043;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.1:7024058 chr01:007024058 0 W/7024058-7024058 FN4176-S SNP G -> A AC=1;AN=170;BQB=0.949363;DP=2380;DP4=1201,1039,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0;MQB=2.55592e-05;MQSB=0.542304;RPB=0.99393;SGB=24.7692;VDB=0.744357;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.1:7029339 chr01:007029339 0 W/7029339-7029339 FN762-S Single Base Substitution C-T INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2657-S.SNP.1:7031170 chr01:007031170 0 W/7031170-7031170 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.879491;DP=4893;DP4=2167,2416,10,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78592e-20;MQSB=0.9698;RPB=0.649793;SGB=-2.21717;VDB=0.795619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.1:7031225 chr01:007031225 0 W/7031225-7031225 FN3478-S SNP G -> A AC=1;AN=184;BQB=0.973335;DP=2814;DP4=1340,1382,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25477e-12;MQSB=0.995133;RPB=0.999179;SGB=93.9603;VDB=0.0254005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:7032897 chr01:007032897 0 W/7032897-7032897 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.967341;DP=2811;DP4=1364,1369,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36363e-05;MQSB=0.727058;RPB=0.882512;SGB=30.8803;VDB=0.568682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:7035115 chr01:007035115 0 W/7035115-7035115 FN2670-S SNP T -> A AC=1;AN=200;BQB=0.9999;DP=5238;DP4=2537,2504,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01201e-14;MQSB=0.976416;RPB=0.186823;SGB=50.3263;VDB=0.0297364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:7036708 chr01:007036708 0 W/7036708-7036708 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.996168;DP=4781;DP4=2097,2330,15,8;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.00024139;MQSB=6.14044e-05;RPB=0.85339;SGB=45.1159;VDB=0.597876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.1:7041431 chr01:007041431 0 W/7041431-7041431 FN3385-S SNP T -> C AC=1;AN=184;BQB=0.880823;DP=2689;DP4=1254,1268,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16847e-06;MQSB=0.998591;RPB=0.936534;SGB=35.1773;VDB=0.239056;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D405|597|LOC_Os01g12720|protein_coding|CODING|LOC_Os01g12720.1|6|1) FN2175-S.SNP.1:7042525 chr01:007042525 0 W/7042525-7042525 FN2175-S SNP T -> A AC=1;AN=168;BQB=0.105935;DP=3093;DP4=1656,1402,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.38e-05;MQSB=0.883679;RPB=0.50312;SGB=-17.0958;VDB=0.492201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F542Y|597|LOC_Os01g12720|protein_coding|CODING|LOC_Os01g12720.1|8|1) FN3050-S.SNP.1:7044659 chr01:007044659 0 W/7044659-7044659 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.844601;DP=2656;DP4=1104,1448,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.04665e-06;MQSB=0.997791;RPB=0.319864;SGB=35.1773;VDB=0.848733;EFF=INTRON(MODIFIER||||207|LOC_Os01g12730|protein_coding|CODING|LOC_Os01g12730.1|3|1),INTRON(MODIFIER||||191|LOC_Os01g12730|protein_coding|CODING|LOC_Os01g12730.2|2|1) FN3777-S.SNP.1:7048735 chr01:007048735 0 W/7048735-7048735 FN3777-S SNP C -> G AC=2;AN=190;BQB=0.998475;DP=3315;DP4=1694,1484,22,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44467e-20;MQSB=0.999996;RPB=0.240983;SGB=153.834;VDB=0.430412;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R155G|558|LOC_Os01g12740|protein_coding|CODING|LOC_Os01g12740.1|1|1) FN2487.SNP.1:7056253 chr01:007056253 0 W/7056253-7056253 FN2487 SNP T -> C AC=2;AN=200;BQB=0.847703;DP=4669;DP4=2529,1904,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.25525e-24;MQSB=0.483374;RPB=0.753557;SGB=187.814;VDB=0.663933;EFF=UTR_3_PRIME(MODIFIER||64||561|LOC_Os01g12750|protein_coding|CODING|LOC_Os01g12750.1|2|1) FN2739-S.SNP.1:7058170 chr01:007058170 0 W/7058170-7058170 FN2739-S SNP T -> C AC=2;AN=200;BQB=0.826712;DP=5051;DP4=2592,2239,20,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.76931e-15;MQSB=0.256502;RPB=0.426602;SGB=51.2243;VDB=0.0333382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.1:7066296 chr01:007066296 0 W/7066296-7066296 FN2355 SNP T -> C AC=2;AN=192;BQB=0.219328;DP=5081;DP4=2305,2417,18,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.10397e-22;MQSB=0.817034;RPB=0.988679;SGB=103.28;VDB=0.306521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.1:7069876 chr01:007069876 0 W/7069876-7069876 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.776261;DP=4908;DP4=2250,2389,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.30433e-13;MQSB=0.998209;RPB=0.678592;SGB=42.5108;VDB=0.990394;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.1:7072879 chr01:007072879 0 W/7072879-7072879 FN2151-S SNP A -> G AC=1;AN=168;BQB=0.000804538;DP=2844;DP4=1113,1698,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.00962e-06;MQSB=0.561828;RPB=0.840807;SGB=-122.918;VDB=0.411235;EFF=INTRON(MODIFIER||||540|LOC_Os01g12770|protein_coding|CODING|LOC_Os01g12770.1|1|1) FN2782-S.SNP.1:7077226 chr01:007077226 0 W/7077226-7077226 FN2782-S SNP T -> A AC=1;AN=198;BQB=0.95819;DP=3306;DP4=1383,1756,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00030248;MQB=5.29369e-07;MQSB=0.69112;RPB=0.900833;SGB=1.37381;VDB=0.755921;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.1:7083788 chr01:007083788 0 W/7083788-7083788 FN369-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3916-S.SNP.1:7084378 chr01:007084378 0 W/7084378-7084378 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.866813;DP=2883;DP4=1404,1377,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.78573e-07;MQSB=0.718175;RPB=0.942462;SGB=34.0735;VDB=0.702813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S967N|1251|LOC_Os01g12790|protein_coding|CODING|LOC_Os01g12790.1|4|1) FN-215.SNP.1:7088346 chr01:007088346 0 W/7088346-7088346 FN-215 Single Base Substitution C-T INTRON HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3423-S.SNP.1:7089263 chr01:007089263 0 W/7089263-7089263 FN3423-S SNP G -> A AC=1;AN=184;BQB=0.983354;DP=3217;DP4=1397,1718,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.61126e-06;MQSB=0.860033;RPB=0.0623522;SGB=28.7043;VDB=0.0888149;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.1:7097976 chr01:007097976 0 W/7097976-7097976 FN320-S Single Base Substitution T-C INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3818-S.SNP.1:7104612 chr01:007104612 0 W/7104612-7104612 FN3818-S SNP T -> A AC=1;AN=190;BQB=0.746521;DP=2584;DP4=1146,1343,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.62472e-06;MQSB=0.95118;RPB=0.995636;SGB=35.4339;VDB=0.509555;EFF=UTR_3_PRIME(MODIFIER||354||687|LOC_Os01g12840|protein_coding|CODING|LOC_Os01g12840.1|5|1) FN-278.SNP.1:7106171 chr01:007106171 0 W/7106171-7106171 FN-278 Single Base Substitution T-A INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-278.SNP.1:7106173 chr01:007106173 0 W/7106173-7106173 FN-278 Single Base Substitution T-A INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2424.SNP.1:7108315 chr01:007108315 0 W/7108315-7108315 FN2424 SNP C -> A AC=1;AN=200;BQB=0.957343;DP=4451;DP4=2007,2159,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11749e-08;MQSB=0.936859;RPB=0.543894;SGB=36.6644;VDB=0.283476;EFF=INTRON(MODIFIER||||687|LOC_Os01g12840|protein_coding|CODING|LOC_Os01g12840.1|1|1) FN2267-S.SNP.1:7108848 chr01:007108848 0 W/7108848-7108848 FN2267-S SNP A -> T AC=1;AN=190;BQB=0.516334;DP=4531;DP4=2235,1982,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33492e-08;MQSB=0.745612;RPB=0.863445;SGB=26.2136;VDB=0.197212;EFF=INTRON(MODIFIER||||687|LOC_Os01g12840|protein_coding|CODING|LOC_Os01g12840.1|1|1) FN1566-S.SNP.1:7112249 chr01:007112249 0 W/7112249-7112249 FN1566-S Single Base Substitution T-C INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2421.SNP.1:7112265 chr01:007112265 0 W/7112265-7112265 FN2421 SNP C -> G AC=1;AN=200;BQB=0.986266;DP=4467;DP4=1437,2689,3,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.0407e-07;MQSB=0.000163599;RPB=0.767561;SGB=21.6694;VDB=0.778596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.1:7112700 chr01:007112700 0 W/7112700-7112700 FN3782-S SNP A -> G AC=1;AN=190;BQB=0.964453;DP=2523;DP4=1159,1256,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.75323e-08;MQSB=0.75675;RPB=0.998931;SGB=39.6545;VDB=0.752795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.1:7112704 chr01:007112704 0 W/7112704-7112704 FN3782-S SNP A -> C AC=1;AN=190;BQB=0.970113;DP=2554;DP4=1152,1269,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.27242e-08;MQSB=0.793836;RPB=0.999593;SGB=43.2083;VDB=0.803081;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.1:7115651 chr01:007115651 0 W/7115651-7115651 FN2697-S SNP G -> A AC=1;AN=200;BQB=0.474089;DP=4628;DP4=2090,2235,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.27681e-06;MQSB=0.0068593;RPB=0.312107;SGB=35.8441;VDB=0.219792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.1:7116169 chr01:007116169 0 W/7116169-7116169 FN1234-S Single Base Substitution A-T INTRON HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1480-S.SNP.1:7116714 chr01:007116714 0 W/7116714-7116714 FN1480-S Single Base Substitution T-A INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN798-S.SNP.1:7119595 chr01:007119595 0 W/7119595-7119595 FN798-S Single Base Substitution G-A INTRON HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2328.SNP.1:7122019 chr01:007122019 0 W/7122019-7122019 FN2328 SNP A -> G AC=1;AN=192;BQB=0.589686;DP=5135;DP4=2384,2356,13,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.73292e-16;MQSB=0.862185;RPB=0.776989;SGB=-4.04606;VDB=0.720843;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S819|972|LOC_Os01g12860|protein_coding|CODING|LOC_Os01g12860.1|8|1) FN1089-S.SNP.1:7127325 chr01:007127325 0 W/7127325-7127325 FN1089-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g12870 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN3570-S.SNP.1:7132307 chr01:007132307 0 W/7132307-7132307 FN3570-S SNP G -> T AC=1;AN=190;BQB=0.788502;DP=2868;DP4=1264,1517,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.6148e-09;MQSB=0.962641;RPB=0.93387;SGB=26.2136;VDB=0.761518;EFF=INTRON(MODIFIER||||711|LOC_Os01g12880|protein_coding|CODING|LOC_Os01g12880.1|5|1) FN1735-S.SNP.1:7140538 chr01:007140538 0 W/7140538-7140538 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.0408493;DP=4169;DP4=1916,2196,11,26;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.03584e-11;MQSB=0.927361;RPB=0.911538;SGB=-335.894;VDB=0.99945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.1:7141541 chr01:007141541 0 W/7141541-7141541 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.654566;DP=4523;DP4=2102,2029,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000442184;MQB=1.67984e-11;MQSB=0.000329459;RPB=0.993861;SGB=-7.88458;VDB=0.880058;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.1:7142026 chr01:007142026 0 W/7142026-7142026 FN1640-S Single Base Substitution G-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN-412.SNP.1:7145307 chr01:007145307 0 W/7145307-7145307 FN-412 Single Base Substitution G-T INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN2301.SNP.1:7149614 chr01:007149614 0 W/7149614-7149614 FN2301 SNP C -> A AC=1;AN=192;BQB=0.892179;DP=4748;DP4=2372,2045,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00042123;MQB=1.00872e-06;MQSB=0.42592;RPB=0.446035;SGB=-35.3278;VDB=0.0148393;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.1:7149793 chr01:007149793 0 W/7149793-7149793 FN2487 SNP G -> C AC=2;AN=200;BQB=0.785679;DP=4324;DP4=1865,2124,15,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.54698e-21;MQSB=0.982849;RPB=0.349917;SGB=115.978;VDB=0.104325;EFF=INTERGENIC(MODIFIER||||||||||1) FN693-S.SNP.1:7154641 chr01:007154641 0 W/7154641-7154641 FN693-S Single Base Substitution T-A INTERGENIC HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN693-S.SNP.1:7154642 chr01:007154642 0 W/7154642-7154642 FN693-S Single Base Substitution T-A INTERGENIC HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN3834-S.SNP.1:7156200 chr01:007156200 0 W/7156200-7156200 FN3834-S SNP T -> A AC=2;AN=190;BQB=0.637437;DP=3515;DP4=1590,1640,21,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.66464e-15;MQSB=0.996634;RPB=0.601689;SGB=79.845;VDB=0.906792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.1:7177715 chr01:007177715 0 W/7177715-7177715 FN1721-S SNP C -> A AC=1;AN=188;BQB=0.0109469;DP=2935;DP4=1507,1365,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.4224e-06;MQSB=0.984809;RPB=0.43633;SGB=10.1681;VDB=0.299995;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P1316|1392|LOC_Os01g12930|protein_coding|CODING|LOC_Os01g12930.1|13|1) FN2587-S.SNP.1:7190865 chr01:007190865 0 W/7190865-7190865 FN2587-S SNP C -> T AC=1;AN=198;BQB=0.603241;DP=4323;DP4=2109,1960,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.58693e-08;MQSB=0.848933;RPB=0.598902;SGB=2.96892;VDB=0.755912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.1:7191217 chr01:007191217 0 W/7191217-7191217 FN3465-S SNP A -> T AC=1;AN=184;BQB=0.103549;DP=2566;DP4=1125,1354,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00384059;MQSB=0.929672;RPB=0.997651;SGB=66.8296;VDB=0.943826;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.1:7191280 chr01:007191280 0 W/7191280-7191280 FN978-S Single Base Substitution T-C INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN590-S.SNP.1:7195196 chr01:007195196 0 W/7195196-7195196 FN590-S Single Base Substitution C-T INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN858-S.SNP.1:7198479 chr01:007198479 0 W/7198479-7198479 FN858-S Single Base Substitution T-C INTRON HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN1383-S.SNP.1:7198503 chr01:007198503 0 W/7198503-7198503 FN1383-S Single Base Substitution G-A INTRON HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3423-S.SNP.1:7201606 chr01:007201606 0 W/7201606-7201606 FN3423-S SNP G -> A AC=1;AN=184;BQB=0.99455;DP=2183;DP4=1021,1116,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00503894;MQB=4.39616e-05;MQSB=0.0538296;RPB=0.156521;SGB=44.2207;VDB=0.242386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D226N|272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D226N|272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D226N|272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.3|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D226N|272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.4|6|1) FN2670-S.SNP.1:7207882 chr01:007207882 0 W/7207882-7207882 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.0466501;DP=4705;DP4=2102,2173,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.2886e-05;MQSB=0.992046;RPB=0.992866;SGB=43.8747;VDB=0.601779;EFF=INTRON(MODIFIER||||272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.3|8|1),INTRON(MODIFIER||||272|LOC_Os01g12950|protein_coding|CODING|LOC_Os01g12950.2|9|1) FN519-S.SNP.1:7214137 chr01:007214137 0 W/7214137-7214137 FN519-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN3515-S.SNP.1:7215259 chr01:007215259 0 W/7215259-7215259 FN3515-S SNP G -> A AC=1;AN=188;BQB=0.902276;DP=3354;DP4=1716,1545,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.13581e-09;MQSB=0.177839;RPB=0.845695;SGB=62.6088;VDB=0.2252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.1:7216143 chr01:007216143 0 W/7216143-7216143 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.812174;DP=2309;DP4=1618,644,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.69679e-08;MQSB=0.0933613;RPB=0.0253051;SGB=7.05233;VDB=0.419171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.1:7216925 chr01:007216925 0 W/7216925-7216925 FN3064-S SNP C -> T AC=1;AN=184;BQB=0.985187;DP=1950;DP4=862,964,4,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0092638;MQSB=0.975889;RPB=0.967026;SGB=21.6146;VDB=0.0280683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A387T|406|LOC_Os01g13000|protein_coding|CODING|LOC_Os01g13000.1|8|1) FN1115-S.SNP.1:7226453 chr01:007226453 0 W/7226453-7226453 FN1115-S Single Base Substitution G-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN-305.SNP.1:7228290 chr01:007228290 0 W/7228290-7228290 FN-305 Single Base Substitution A-G INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN267-S.SNP.1:7230199 chr01:007230199 0 W/7230199-7230199 FN267-S Single Base Substitution G-A INTERGENIC HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN-171.SNP.1:7230555 chr01:007230555 0 W/7230555-7230555 FN-171 Single Base Substitution G-A INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2149-S.SNP.1:7232034 chr01:007232034 0 W/7232034-7232034 FN2149-S SNP T -> C AC=1;AN=168;BQB=0.0743314;DP=2592;DP4=1063,1497,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.88661e-09;MQSB=0.998752;RPB=0.89444;SGB=-14.0801;VDB=0.900481;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.1:7242821 chr01:007242821 0 W/7242821-7242821 FN896-S Single Base Substitution A-T INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN-71.SNP.1:7247453 chr01:007247453 0 W/7247453-7247453 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-189.SNP.1:7264737 chr01:007264737 0 W/7264737-7264737 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1213-S.SNP.1:7272613 chr01:007272613 0 W/7272613-7272613 FN1213-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN729-S.SNP.1:7278628 chr01:007278628 0 W/7278628-7278628 FN729-S Single Base Substitution T-A INTERGENIC HOMO SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1256-S.SNP.1:7278629 chr01:007278629 0 W/7278629-7278629 FN1256-S Single Base Substitution A-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2107-S.SNP.1:7281027 chr01:007281027 0 W/7281027-7281027 FN2107-S SNP T -> A AC=2;AN=168;BQB=0.288234;DP=4367;DP4=2260,2040,32,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.2031e-30;MQSB=0.948652;RPB=0.377541;SGB=-244.27;VDB=0.00709776;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.1:7281028 chr01:007281028 0 W/7281028-7281028 FN2107-S SNP C -> A AC=2;AN=168;BQB=0.575757;DP=4399;DP4=2287,2047,31,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.20968e-28;MQSB=0.947347;RPB=0.621745;SGB=-58.8571;VDB=0.0241925;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.1:7295029 chr01:007295029 0 W/7295029-7295029 FN830-S Single Base Substitution A-G INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN-259.SNP.1:7297256 chr01:007297256 0 W/7297256-7297256 FN-259 Single Base Substitution T-A INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2107-S.SNP.1:7299170 chr01:007299170 0 W/7299170-7299170 FN2107-S SNP A -> G AC=2;AN=168;BQB=0.967514;DP=3234;DP4=1613,1540,15,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.31008e-15;MQSB=0.981425;RPB=0.998897;SGB=-8.91027;VDB=0.820355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.1:7303248 chr01:007303248 0 W/7303248-7303248 FN3722-S SNP C -> T AC=1;AN=190;BQB=0.966443;DP=1903;DP4=993,800,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.39059e-10;MQSB=0.966952;RPB=0.995457;SGB=46.7622;VDB=0.994859;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D167|256|LOC_Os01g13130|protein_coding|CODING|LOC_Os01g13130.1|2|1) FN3517-S.SNP.1:7310299 chr01:007310299 0 W/7310299-7310299 FN3517-S SNP A -> G AC=1;AN=188;BQB=0.636551;DP=3180;DP4=1470,1546,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.54545e-08;MQSB=0.107888;RPB=0.274509;SGB=10.1681;VDB=0.839746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.1:7316544 chr01:007316544 0 W/7316544-7316544 FN1154-S Single Base Substitution A-T INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2345.SNP.1:7322380 chr01:007322380 0 W/7322380-7322380 FN2345 SNP T -> A AC=2;AN=192;BQB=0.849934;DP=4951;DP4=2381,2289,28,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.11232e-31;MQSB=0.99256;RPB=0.999947;SGB=77.7505;VDB=0.0868969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.1:7323460 chr01:007323460 0 W/7323460-7323460 FN3456-S SNP G -> A AC=2;AN=184;BQB=0.985367;DP=2193;DP4=987,1133,10,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.28537e-09;MQSB=0.965073;RPB=0.316808;SGB=46.3132;VDB=0.39202;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.1:7325983 chr01:007325983 0 W/7325983-7325983 FN1109-S Single Base Substitution G-A INTRON HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2742-S.SNP.1:7326150 chr01:007326150 0 W/7326150-7326150 FN2742-S SNP A -> T AC=1;AN=200;BQB=0.803652;DP=4907;DP4=2547,2141,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77536e-10;MQSB=0.986902;RPB=0.282596;SGB=9.48993;VDB=0.0614606;EFF=INTRON(MODIFIER||||820|LOC_Os01g13150|protein_coding|CODING|LOC_Os01g13150.1|1|1) FN2779-S.SNP.1:7344686 chr01:007344686 0 W/7344686-7344686 FN2779-S SNP T -> C AC=2;AN=198;BQB=0.596816;DP=4183;DP4=2010,1787,38,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.25741e-28;MQSB=0.979958;RPB=0.419511;SGB=87.4941;VDB=0.846068;EFF=INTRON(MODIFIER||||485|LOC_Os01g13170|protein_coding|CODING|LOC_Os01g13170.1|6|1) FN3763-S.SNP.1:7344769 chr01:007344769 0 W/7344769-7344769 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.941504;DP=2749;DP4=1599,1065,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000227417;MQSB=0.989751;RPB=0.944397;SGB=30.8803;VDB=0.798217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R364C|485|LOC_Os01g13170|protein_coding|CODING|LOC_Os01g13170.1|7|1) FN4234-S.SNP.1:7346312 chr01:007346312 0 W/7346312-7346312 FN4234-S SNP T -> A AC=1;AN=170;BQB=0.747036;DP=2821;DP4=1376,1261,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.92605e-08;MQSB=0.988621;RPB=0.971491;SGB=19.8839;VDB=0.855875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T223S|355|LOC_Os01g13180|protein_coding|CODING|LOC_Os01g13180.1|1|1) FN2622-S.SNP.1:7349573 chr01:007349573 0 W/7349573-7349573 FN2622-S SNP A -> C AC=2;AN=200;BQB=0.941731;DP=5220;DP4=2409,2527,41,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.24126e-40;MQSB=0.997989;RPB=0.111464;SGB=99.3795;VDB=0.716649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E138D|473|LOC_Os01g13190|protein_coding|CODING|LOC_Os01g13190.1|4|1) FN425-S.SNP.1:7351845 chr01:007351845 0 W/7351845-7351845 FN425-S Single Base Substitution G-C STOP_LOST HET LOC_Os01g13190 histidinol dehydrogenase, chloroplast precursor, putative, expressed SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN4117-S.SNP.1:7352204 chr01:007352204 0 W/7352204-7352204 FN4117-S SNP A -> C AC=1;AN=182;BQB=0.902706;DP=3005;DP4=1563,1374,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.85044e-09;MQSB=0.990039;RPB=0.999946;SGB=57.644;VDB=0.794435;EFF=UTR_3_PRIME(MODIFIER||314||542|LOC_Os01g13200|protein_coding|CODING|LOC_Os01g13200.1|11|1) FN518-S.SNP.1:7355529 chr01:007355529 0 W/7355529-7355529 FN518-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g13200 abscisic acid insensitive 8, putative, expressed SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN3380-S.SNP.1:7360721 chr01:007360721 0 W/7360721-7360721 FN3380-S SNP A -> T AC=1;AN=184;BQB=0.984191;DP=2539;DP4=1223,1228,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.39702e-10;MQSB=0.803452;RPB=0.99559;SGB=46.3132;VDB=0.473815;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.1:7373350 chr01:007373350 0 W/7373350-7373350 FN2188-S SNP T -> A AC=2;AN=190;BQB=0.958868;DP=4372;DP4=1818,1942,32,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35227e-29;MQSB=0.902439;RPB=0.998582;SGB=158.519;VDB=0.693647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R275W|681|LOC_Os01g13229|protein_coding|CODING|LOC_Os01g13229.1|3|1),SPLICE_SITE_REGION(LOW||||681|LOC_Os01g13229|protein_coding|CODING|LOC_Os01g13229.1|3|1) FN2375.SNP.1:7385533 chr01:007385533 0 W/7385533-7385533 FN2375 SNP A -> T AC=1;AN=192;BQB=0.892526;DP=4799;DP4=2264,2283,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.76463e-08;MQSB=0.999413;RPB=0.968234;SGB=23.7852;VDB=0.0160791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.1:7385980 chr01:007385980 0 W/7385980-7385980 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.976417;DP=3085;DP4=1515,1491,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000972447;MQB=1.10997e-09;MQSB=0.921889;RPB=0.813526;SGB=71.6954;VDB=0.930518;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A29V|182|LOC_Os01g13250|protein_coding|CODING|LOC_Os01g13250.1|1|1) FN440-S.SNP.1:7388955 chr01:007388955 0 W/7388955-7388955 FN440-S Single Base Substitution T-C INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2198-S.SNP.1:7389014 chr01:007389014 0 W/7389014-7389014 FN2198-S SNP G -> A AC=2;AN=190;BQB=0.983044;DP=5307;DP4=2396,2416,14,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.40867e-19;MQSB=0.971441;RPB=0.555417;SGB=35.1887;VDB=0.661692;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.1:7390157 chr01:007390157 0 W/7390157-7390157 FN4203-S SNP T -> A AC=2;AN=170;BQB=0.89628;DP=2447;DP4=1287,1034,20,8;HOB=0.0232526;ICB=0.494188;MQ=21;MQ0F=0.358807;MQB=0.450928;MQSB=0;RPB=0.983337;SGB=118.955;VDB=0.978551;EFF=INTRON(MODIFIER||||508|LOC_Os01g13260|protein_coding|CODING|LOC_Os01g13260.1|9|1) FN1610-S.SNP.1:7401094 chr01:007401094 0 W/7401094-7401094 FN1610-S Single Base Substitution A-C INTRON HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1523-S.SNP.1:7401263 chr01:007401263 0 W/7401263-7401263 FN1523-S Single Base Substitution A-G INTRON HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN3889-S.SNP.1:7408257 chr01:007408257 0 W/7408257-7408257 FN3889-S SNP T -> C AC=2;AN=158;BQB=0.382835;DP=2226;DP4=1127,1020,14,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.87557e-10;MQSB=0.999989;RPB=0.99885;SGB=42.7743;VDB=0.789092;EFF=INTRON(MODIFIER||||374|LOC_Os01g13280|protein_coding|CODING|LOC_Os01g13280.1|2|1) FN1333-S.SNP.1:7410910 chr01:007410910 0 W/7410910-7410910 FN1333-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2126-S.SNP.1:7417708 chr01:007417708 0 W/7417708-7417708 FN2126-S SNP G -> T AC=2;AN=168;BQB=0.518656;DP=3804;DP4=2058,1654,21,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05984e-22;MQSB=0.947135;RPB=0.196061;SGB=-167.43;VDB=0.0597138;EFF=INTRON(MODIFIER||||495|LOC_Os01g13300|protein_coding|CODING|LOC_Os01g13300.1|1|1) FN819-S.SNP.1:7423292 chr01:007423292 0 W/7423292-7423292 FN819-S Single Base Substitution A-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN971-S.SNP.1:7428566 chr01:007428566 0 W/7428566-7428566 FN971-S Single Base Substitution C-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3591-S.SNP.1:7431039 chr01:007431039 0 W/7431039-7431039 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.468304;DP=3714;DP4=1651,1934,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.47244e-09;MQSB=0.999873;RPB=0.431154;SGB=98.9552;VDB=0.0887537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R524W|621|LOC_Os01g13320|protein_coding|CODING|LOC_Os01g13320.1|2|1) FN3472-S.SNP.1:7435409 chr01:007435409 0 W/7435409-7435409 FN3472-S SNP T -> A AC=1;AN=184;BQB=0.831553;DP=2817;DP4=1272,1239,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58994e-16;MQSB=0.753111;RPB=0.808912;SGB=20.4984;VDB=0.659209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.1:7435410 chr01:007435410 0 W/7435410-7435410 FN3472-S SNP T -> A AC=1;AN=184;BQB=0.886862;DP=2823;DP4=1326,1330,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.45142e-15;MQSB=0.757591;RPB=0.849977;SGB=98.4821;VDB=0.453596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.1:7435411 chr01:007435411 0 W/7435411-7435411 FN3472-S SNP C -> T AC=1;AN=184;BQB=0.999228;DP=2826;DP4=1380,1310,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.06189e-13;MQSB=0.796048;RPB=0.770495;SGB=84.9167;VDB=0.220177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.1:7444877 chr01:007444877 0 W/7444877-7444877 FN3861-S SNP C -> T AC=1;AN=158;BQB=0.947095;DP=2875;DP4=1596,1191,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00026142;MQSB=0.852726;RPB=0.944673;SGB=17.2267;VDB=0.683425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G416S|455|LOC_Os01g13360|protein_coding|CODING|LOC_Os01g13360.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G366S|517|LOC_Os01g13360|protein_coding|CODING|LOC_Os01g13360.1|2|1) FN3715-S.SNP.1:7463146 chr01:007463146 0 W/7463146-7463146 FN3715-S SNP A -> G AC=1;AN=190;BQB=0.759248;DP=2727;DP4=1273,1342,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5133e-07;MQSB=0.9794;RPB=0.961557;SGB=50.3161;VDB=0.320439;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R111|418|LOC_Os01g13404|protein_coding|CODING|LOC_Os01g13404.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R112|314|LOC_Os01g13404|protein_coding|CODING|LOC_Os01g13404.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R111|332|LOC_Os01g13404|protein_coding|CODING|LOC_Os01g13404.3|4|1) FN1348-S.SNP.1:7469468 chr01:007469468 0 W/7469468-7469468 FN1348-S Single Base Substitution T-G INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1190-S.SNP.1:7469998 chr01:007469998 0 W/7469998-7469998 FN1190-S Single Base Substitution A-G INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN712-S.SNP.1:7473342 chr01:007473342 0 W/7473342-7473342 FN712-S Single Base Substitution T-C INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN895-S.SNP.1:7479776 chr01:007479776 0 W/7479776-7479776 FN895-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3958-S.SNP.1:7481734 chr01:007481734 0 W/7481734-7481734 FN3958-S SNP G -> A AC=1;AN=168;BQB=0.782688;DP=3635;DP4=1820,1677,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.51012e-11;MQSB=0.98876;RPB=0.824693;SGB=46.4929;VDB=0.205098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R319C|983|LOC_Os01g13430|protein_coding|CODING|LOC_Os01g13430.1|1|1) FN865-S.SNP.1:7482233 chr01:007482233 0 W/7482233-7482233 FN865-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN4093-S.SNP.1:7486901 chr01:007486901 0 W/7486901-7486901 FN4093-S SNP C -> T AC=2;AN=182;BQB=0.989435;DP=2688;DP4=1299,1317,6,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.86937e-09;MQSB=0.996517;RPB=0.998106;SGB=57.644;VDB=0.950376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.1:7489181 chr01:007489181 0 W/7489181-7489181 FN1210-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. W385-6-8-4.SNP.1:7490120 chr01:007490120 0 W/7490120-7490120 W385-6-8-4 Single Base Substitution C-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3282-S.SNP.1:7500956 chr01:007500956 0 W/7500956-7500956 FN3282-S SNP G -> A AC=1;AN=184;BQB=0.982297;DP=2828;DP4=1249,1513,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.37078e-05;MQSB=0.655599;RPB=0.936248;SGB=39.699;VDB=0.630515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.1:7505780 chr01:007505780 0 W/7505780-7505780 FN2175-S SNP G -> A AC=1;AN=168;BQB=0.00127648;DP=3909;DP4=1948,1914,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0;MQB=0.562979;MQSB=0.999447;RPB=0.761648;SGB=-211.183;VDB=0.943945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.1:7505780 chr01:007505780 0 W/7505780-7505780 FN3412-S SNP G -> A AC=2;AN=184;BQB=0.84929;DP=2687;DP4=1174,1392,11,16;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=1.1717e-11;MQSB=0.378606;RPB=0.655391;SGB=22.0202;VDB=0.0766065;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.1:7515657 chr01:007515657 0 W/7515657-7515657 FN4044-S SNP G -> A AC=1;AN=168;BQB=0.534319;DP=2268;DP4=981,1202,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000860879;MQSB=0.988542;RPB=0.999473;SGB=7.59999;VDB=0.641051;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.1:7516526 chr01:007516526 0 W/7516526-7516526 FN4030-S SNP G -> A AC=1;AN=168;BQB=0.942303;DP=2753;DP4=1493,1124,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52032e-10;MQSB=0.988163;RPB=0.404157;SGB=7.05233;VDB=0.281619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.1:7518138 chr01:007518138 0 W/7518138-7518138 FN3889-S SNP G -> T AC=2;AN=158;BQB=0.999718;DP=1812;DP4=952,735,6,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.40817e-05;MQSB=0.978179;RPB=0.786965;SGB=42.6978;VDB=0.870636;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S275|391|LOC_Os01g13480|protein_coding|CODING|LOC_Os01g13480.1|1|1) FN3877-S.SNP.1:7519916 chr01:007519916 0 W/7519916-7519916 FN3877-S SNP G -> A AC=1;AN=158;BQB=0.956112;DP=1990;DP4=1029,832,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.22689e-05;MQSB=0.97151;RPB=0.200674;SGB=30.704;VDB=0.441617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A45T|202|LOC_Os01g13490|protein_coding|CODING|LOC_Os01g13490.1|1|1) FN2460.SNP.1:7522655 chr01:007522655 0 W/7522655-7522655 FN2460 SNP T -> C AC=2;AN=200;BQB=0.94195;DP=4598;DP4=2091,2202,19,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.94618e-20;MQSB=0.955395;RPB=0.683947;SGB=84.1935;VDB=0.570352;EFF=INTRON(MODIFIER||||202|LOC_Os01g13490|protein_coding|CODING|LOC_Os01g13490.1|1|1) FN3666-S.SNP.1:7523656 chr01:007523656 0 W/7523656-7523656 FN3666-S SNP A -> T AC=1;AN=190;BQB=0.794574;DP=3082;DP4=1552,1356,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.9736e-11;MQSB=0.999282;RPB=0.565001;SGB=50.3161;VDB=0.319005;EFF=INTRON(MODIFIER||||202|LOC_Os01g13490|protein_coding|CODING|LOC_Os01g13490.1|1|1) FN2584-S.SNP.1:7532638 chr01:007532638 0 W/7532638-7532638 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.0836085;DP=4130;DP4=2088,1864,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73053e-08;MQSB=0.968017;RPB=0.606107;SGB=43.7442;VDB=0.911024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.1:7539926 chr01:007539926 0 W/7539926-7539926 FN2731-S SNP A -> T AC=1;AN=200;BQB=0.947122;DP=4960;DP4=2404,2330,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5549e-10;MQSB=0.992542;RPB=0.252418;SGB=37.3004;VDB=0.413191;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.1:7547040 chr01:007547040 0 W/7547040-7547040 FN909-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. W138-2-1.SNP.1:7554676 chr01:007554676 0 W/7554676-7554676 W138-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2408.SNP.1:7555078 chr01:007555078 0 W/7555078-7555078 FN2408 SNP C -> T AC=1;AN=200;BQB=0.691737;DP=5365;DP4=2413,2674,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.73122e-06;MQSB=0.9966;RPB=0.213883;SGB=19.0642;VDB=0.599178;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.1:7563446 chr01:007563446 0 W/7563446-7563446 FN4106-S SNP C -> T AC=2;AN=182;BQB=0.989224;DP=3054;DP4=1657,1280,13,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.25901e-14;MQSB=0.997981;RPB=0.0273319;SGB=102.753;VDB=0.00505591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.1:7568839 chr01:007568839 0 W/7568839-7568839 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1001-S.SNP.1:7568839 chr01:007568839 0 W/7568839-7568839 FN1001-S Single Base Substitution C-T INTERGENIC HOMO SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1097-S.SNP.1:7568839 chr01:007568839 0 W/7568839-7568839 FN1097-S Single Base Substitution C-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN628-S.SNP.1:7568839 chr01:007568839 0 W/7568839-7568839 FN628-S Single Base Substitution C-T INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-353.SNP.1:7568994 chr01:007568994 0 W/7568994-7568994 FN-353 Single Base Substitution C-T INTERGENIC HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3807-S.SNP.1:7571158 chr01:007571158 0 W/7571158-7571158 FN3807-S SNP C -> A AC=1;AN=190;BQB=0.970273;DP=2461;DP4=1179,1187,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000296512;MQSB=0.625376;RPB=0.516613;SGB=30.8803;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.1:7578187 chr01:007578187 0 W/7578187-7578187 FN3918-S SNP T -> C AC=2;AN=158;BQB=0.987849;DP=2720;DP4=1313,1257,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.93547e-09;MQSB=0.992868;RPB=0.993829;SGB=50.9207;VDB=0.174648;EFF=UTR_3_PRIME(MODIFIER||20||566|LOC_Os01g13550|protein_coding|CODING|LOC_Os01g13550.1|4|1) FN1696-S.SNP.1:7597705 chr01:007597705 0 W/7597705-7597705 FN1696-S SNP T -> C AC=1;AN=188;BQB=0.565582;DP=3756;DP4=1698,2030,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.91097e-07;MQSB=0.892991;RPB=0.998097;SGB=32.441;VDB=0.0864528;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.1:7600545 chr01:007600545 0 W/7600545-7600545 W463-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN-108.SNP.1:7603761 chr01:007603761 0 W/7603761-7603761 FN-108 Single Base Substitution G-A INTERGENIC HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3293-S.SNP.1:7605236 chr01:007605236 0 W/7605236-7605236 FN3293-S SNP T -> C AC=1;AN=184;BQB=0.969928;DP=2906;DP4=1289,1528,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.3591e-07;MQSB=0.799264;RPB=0.957352;SGB=62.3078;VDB=0.707795;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.1:7611572 chr01:007611572 0 W/7611572-7611572 FN962-S Single Base Substitution C-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1719-S.SNP.1:7612605 chr01:007612605 0 W/7612605-7612605 FN1719-S SNP A -> G AC=1;AN=188;BQB=0.0231266;DP=4000;DP4=1960,2004,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.2359e-06;MQSB=0.13587;RPB=0.23816;SGB=-39.6481;VDB=0.0733451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.1:7615671 chr01:007615671 0 W/7615671-7615671 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.935812;DP=2978;DP4=1512,1382,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.79535e-05;MQSB=0.958155;RPB=0.165678;SGB=35.4339;VDB=0.351304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.1:7617124 chr01:007617124 0 W/7617124-7617124 FN3982-S SNP A -> T AC=1;AN=168;BQB=0.470119;DP=2367;DP4=1105,1104,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.26472e-09;MQSB=0.953829;RPB=0.0406469;SGB=-37.2282;VDB=0.818024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.1:7617379 chr01:007617379 0 W/7617379-7617379 FN2785-S SNP A -> G AC=1;AN=198;BQB=0.071436;DP=4214;DP4=2081,1755,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.84417e-11;MQSB=0.857097;RPB=0.601296;SGB=14.1348;VDB=0.991945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.1:7619002 chr01:007619002 0 W/7619002-7619002 FN3712-S SNP C -> A AC=1;AN=190;BQB=0.899822;DP=2901;DP4=1586,1191,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.36671e-06;MQSB=0.966544;RPB=0.377165;SGB=35.4339;VDB=0.397592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.1:7624767 chr01:007624767 0 W/7624767-7624767 FN2241-S SNP G -> A AC=2;AN=190;BQB=0.431929;DP=4601;DP4=2631,1725,20,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.51331e-16;MQSB=0.102527;RPB=0.975085;SGB=107.178;VDB=0.126484;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.1:7630547 chr01:007630547 0 W/7630547-7630547 FN4305-S SNP C -> T AC=1;AN=170;BQB=0.996546;DP=1912;DP4=813,1056,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.21579e-06;MQSB=0.960737;RPB=0.772184;SGB=34.5445;VDB=0.563889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1275-S.SNP.1:7635314 chr01:007635314 0 W/7635314-7635314 FN1275-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2212-S.SNP.1:7635626 chr01:007635626 0 W/7635626-7635626 FN2212-S SNP T -> A AC=1;AN=190;BQB=0.643307;DP=3651;DP4=1520,1373,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.79932e-05;MQSB=0.663974;RPB=0.703074;SGB=-34.9861;VDB=0.264949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.1:7636120 chr01:007636120 0 W/7636120-7636120 FN2312 SNP C -> T AC=1;AN=192;BQB=0.676912;DP=4771;DP4=2218,2305,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74435e-07;MQSB=0.606959;RPB=0.933882;SGB=-15.8974;VDB=0.605471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A122V|1145|LOC_Os01g13620|protein_coding|CODING|LOC_Os01g13620.1|2|1) FN576-S.SNP.1:7640625 chr01:007640625 0 W/7640625-7640625 FN576-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g13620 retrotransposon protein, putative, unclassified, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1529-S.SNP.1:7643275 chr01:007643275 0 W/7643275-7643275 FN1529-S Single Base Substitution C-T INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1036-S.SNP.1:7645418 chr01:007645418 0 W/7645418-7645418 FN1036-S Single Base Substitution T-G INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN819-S.SNP.1:7647463 chr01:007647463 0 W/7647463-7647463 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN814-S.SNP.1:7647543 chr01:007647543 0 W/7647543-7647543 FN814-S Single Base Substitution G-A INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN588-S.SNP.1:7652722 chr01:007652722 0 W/7652722-7652722 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN1640-S.SNP.1:7659033 chr01:007659033 0 W/7659033-7659033 FN1640-S Single Base Substitution C-T INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2313.SNP.1:7659514 chr01:007659514 0 W/7659514-7659514 FN2313 SNP G -> A AC=2;AN=192;BQB=5.09774e-09;DP=5009;DP4=2828,1675,27,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.35333e-28;MQSB=0.998147;RPB=0.452227;SGB=5.54786;VDB=7.225e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.1:7659520 chr01:007659520 0 W/7659520-7659520 FN2313 SNP G -> T AC=2;AN=192;BQB=0.989552;DP=4972;DP4=2818,1766,25,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.38295e-30;MQSB=0.982613;RPB=0.999855;SGB=5.54786;VDB=0.000783566;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.1:7661998 chr01:007661998 0 W/7661998-7661998 FN1707-S SNP G -> A AC=2;AN=188;BQB=0.0670224;DP=2449;DP4=1342,1055,18,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.8695e-12;MQSB=0.968951;RPB=0.232349;SGB=-79.383;VDB=0.631637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.1:7667579 chr01:007667579 0 W/7667579-7667579 FN2325 SNP T -> A AC=1;AN=192;BQB=0.251986;DP=4898;DP4=2386,2067,5,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.03836e-10;MQSB=0.980722;RPB=0.67201;SGB=-36.1991;VDB=0.0273015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L326M|330|LOC_Os01g13690|protein_coding|CODING|LOC_Os01g13690.2|3|1),INTRON(MODIFIER||||337|LOC_Os01g13690|protein_coding|CODING|LOC_Os01g13690.1|3|1) FN2325.SNP.1:7667580 chr01:007667580 0 W/7667580-7667580 FN2325 SNP T -> A AC=1;AN=192;BQB=0.835385;DP=4904;DP4=2459,2098,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.65502e-08;MQSB=0.931482;RPB=0.283287;SGB=2.66176;VDB=0.0441028;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L326*|330|LOC_Os01g13690|protein_coding|CODING|LOC_Os01g13690.2|3|1),INTRON(MODIFIER||||337|LOC_Os01g13690|protein_coding|CODING|LOC_Os01g13690.1|3|1) FN3569-S.SNP.1:7668607 chr01:007668607 0 W/7668607-7668607 FN3569-S SNP A -> C AC=1;AN=188;BQB=0.976011;DP=2854;DP4=1399,1331,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06717e-11;MQSB=0.997258;RPB=0.716187;SGB=67.8739;VDB=0.407624;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.1:7679804 chr01:007679804 0 W/7679804-7679804 FN-147 Single Base Substitution G-C INTRON HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN4009-S.SNP.1:7689207 chr01:007689207 0 W/7689207-7689207 FN4009-S SNP C -> T AC=2;AN=168;BQB=0.846262;DP=1373;DP4=474,816,3,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000195784;MQSB=0.180832;RPB=0.379112;SGB=21.0249;VDB=0.257627;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W352*|539|LOC_Os01g13740|protein_coding|CODING|LOC_Os01g13740.1|3|1),INTRON(MODIFIER||||386|LOC_Os01g13740|protein_coding|CODING|LOC_Os01g13740.2|2|1);LOF=(LOC_Os01g13740|LOC_Os01g13740|2|0.50);NMD=(LOC_Os01g13740|LOC_Os01g13740|2|0.50) FN1121-S.SNP.1:7690343 chr01:007690343 0 W/7690343-7690343 FN1121-S Single Base Substitution C-T INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3819-S.SNP.1:7693142 chr01:007693142 0 W/7693142-7693142 FN3819-S SNP G -> A AC=1;AN=190;BQB=0.213493;DP=2947;DP4=1286,1517,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00187367;MQSB=0.977295;RPB=0.472478;SGB=39.9877;VDB=0.881279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P94S|539|LOC_Os01g13740|protein_coding|CODING|LOC_Os01g13740.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P94S|386|LOC_Os01g13740|protein_coding|CODING|LOC_Os01g13740.2|1|1) FN1708-S.SNP.1:7698780 chr01:007698780 0 W/7698780-7698780 FN1708-S SNP A -> G AC=1;AN=188;BQB=0.0237096;DP=3636;DP4=1734,1850,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.07844e-05;MQSB=0.95532;RPB=0.872272;SGB=-153.343;VDB=0.338958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.1:7702564 chr01:007702564 0 W/7702564-7702564 FN2789-S SNP A -> C AC=1;AN=198;BQB=0.996642;DP=4033;DP4=1896,1951,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.39491e-09;MQSB=0.78869;RPB=0.523036;SGB=58.7391;VDB=0.402361;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.1:7710722 chr01:007710722 0 W/7710722-7710722 FN3834-S SNP G -> A AC=2;AN=190;BQB=0.953427;DP=2783;DP4=1434,1227,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.69419e-10;MQSB=0.972635;RPB=0.413761;SGB=80.9724;VDB=0.890562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:7710828 chr01:007710828 0 W/7710828-7710828 FN2498 SNP C -> T AC=1;AN=200;BQB=0.535609;DP=4235;DP4=2162,1801,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.6575e-06;MQSB=0.885515;RPB=0.650908;SGB=35.8441;VDB=0.507606;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.1:7714202 chr01:007714202 0 W/7714202-7714202 FN3716-S SNP T -> C AC=1;AN=190;BQB=0.972906;DP=3057;DP4=1468,1506,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33773e-05;MQSB=0.817176;RPB=0.890723;SGB=25.439;VDB=0.221848;EFF=INTRON(MODIFIER||||349|LOC_Os01g13760|protein_coding|CODING|LOC_Os01g13760.1|2|1) FN3778-S.SNP.1:7722511 chr01:007722511 0 W/7722511-7722511 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.808368;DP=2197;DP4=1104,942,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.40977e-06;MQSB=0.00138816;RPB=0.364685;SGB=44.5415;VDB=0.156887;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.1:7722852 chr01:007722852 0 W/7722852-7722852 FN-149 Single Base Substitution A-G INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN4203-S.SNP.1:7723436 chr01:007723436 0 W/7723436-7723436 FN4203-S SNP G -> A AC=2;AN=170;BQB=0.852264;DP=2822;DP4=1249,1450,20,27;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.7153e-30;MQSB=0.995594;RPB=0.996123;SGB=203.365;VDB=0.365422;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.1:7723437 chr01:007723437 0 W/7723437-7723437 FN4203-S SNP C -> A AC=2;AN=170;BQB=0.910665;DP=2831;DP4=1260,1457,21,22;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.21813e-27;MQSB=0.98076;RPB=0.728471;SGB=90.7208;VDB=0.51209;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.1:7723438 chr01:007723438 0 W/7723438-7723438 FN4203-S SNP C -> A AC=2;AN=170;BQB=0.949447;DP=2840;DP4=1267,1463,19,28;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.42373e-30;MQSB=0.999798;RPB=0.990601;SGB=100.491;VDB=0.404239;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.1:7725495 chr01:007725495 0 W/7725495-7725495 FN4187-S SNP T -> A AC=2;AN=170;BQB=0.836111;DP=2773;DP4=1324,1358,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.89442e-13;MQSB=0.980632;RPB=0.872837;SGB=87.856;VDB=0.863235;EFF=UTR_3_PRIME(MODIFIER||593||193|LOC_Os01g13780|protein_coding|CODING|LOC_Os01g13780.1|1|1) FN3325-S.SNP.1:7728113 chr01:007728113 0 W/7728113-7728113 FN3325-S SNP C -> G AC=1;AN=184;BQB=0.44594;DP=2283;DP4=942,1213,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00234123;MQSB=0.000177719;RPB=0.045241;SGB=25.1826;VDB=0.0561217;EFF=INTERGENIC(MODIFIER||||||||||1) FN1674-S.SNP.1:7733737 chr01:007733737 0 W/7733737-7733737 FN1674-S SNP C -> A AC=1;AN=188;BQB=0.680495;DP=3020;DP4=1630,1337,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.19467e-07;MQSB=0.765788;RPB=0.863203;SGB=18.4463;VDB=0.440139;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.1:7748317 chr01:007748317 0 W/7748317-7748317 FN1499-S Single Base Substitution G-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN876-S.SNP.1:7749174 chr01:007749174 0 W/7749174-7749174 FN876-S Single Base Substitution C-T INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN-198.SNP.1:7753323 chr01:007753323 0 W/7753323-7753323 FN-198 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g13820 retrotransposon protein, putative, unclassified, expressed SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2424.SNP.1:7761555 chr01:007761555 0 W/7761555-7761555 FN2424 SNP T -> A AC=2;AN=200;BQB=0.904599;DP=4533;DP4=2161,1987,21,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.43597e-18;MQSB=0.482225;RPB=0.531648;SGB=76.378;VDB=0.332235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.1:7764751 chr01:007764751 0 W/7764751-7764751 FN1401-S Single Base Substitution C-T INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1150-S.SNP.1:7770655 chr01:007770655 0 W/7770655-7770655 FN1150-S Single Base Substitution A-G INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN898-S.SNP.1:7770980 chr01:007770980 0 W/7770980-7770980 FN898-S Single Base Substitution C-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN-166.SNP.1:7772821 chr01:007772821 0 W/7772821-7772821 FN-166 Single Base Substitution T-G INTRON HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1701-S.SNP.1:7774823 chr01:007774823 0 W/7774823-7774823 FN1701-S SNP T -> A AC=1;AN=188;BQB=0.452694;DP=3311;DP4=1420,1826,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30786e-09;MQSB=0.950416;RPB=0.592819;SGB=-12.2833;VDB=0.198329;EFF=INTERGENIC(MODIFIER||||||||||1) 704-2.SNP.1:7784021 chr01:007784021 0 W/7784021-7784021 704-2 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1456, Mutant_ID: 704-2, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-3.SNP.1:7784021 chr01:007784021 0 W/7784021-7784021 704-3 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1457, Mutant_ID: 704-3, Generation: M2, Mutations: 21, Genes: 8, Seed availability: Yes. 704-5.SNP.1:7784021 chr01:007784021 0 W/7784021-7784021 704-5 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1459, Mutant_ID: 704-5, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-6.SNP.1:7784021 chr01:007784021 0 W/7784021-7784021 704-6 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1460, Mutant_ID: 704-6, Generation: M2, Mutations: 19, Genes: 8, Seed availability: No. 704-2.SNP.1:7784022 chr01:007784022 0 W/7784022-7784022 704-2 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1456, Mutant_ID: 704-2, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-3.SNP.1:7784022 chr01:007784022 0 W/7784022-7784022 704-3 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1457, Mutant_ID: 704-3, Generation: M2, Mutations: 21, Genes: 8, Seed availability: Yes. 704-5.SNP.1:7784022 chr01:007784022 0 W/7784022-7784022 704-5 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1459, Mutant_ID: 704-5, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-6.SNP.1:7784022 chr01:007784022 0 W/7784022-7784022 704-6 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g13890 retrotransposon protein, putative, unclassified, expressed SNo: 1460, Mutant_ID: 704-6, Generation: M2, Mutations: 19, Genes: 8, Seed availability: No. FN705-S.SNP.1:7790911 chr01:007790911 0 W/7790911-7790911 FN705-S Single Base Substitution T-C INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN4185-S.SNP.1:7805926 chr01:007805926 0 W/7805926-7805926 FN4185-S SNP C -> T AC=2;AN=170;BQB=0.91774;DP=2547;DP4=1176,1283,9,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.6095e-14;MQSB=0.785676;RPB=0.833247;SGB=92.2986;VDB=0.24306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.1:7813710 chr01:007813710 0 W/7813710-7813710 FN2273-S SNP T -> C AC=2;AN=190;BQB=0.440541;DP=5304;DP4=2428,2345,27,35;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00188537;MQB=1.47196e-11;MQSB=7.60929e-14;RPB=0.937837;SGB=77.1433;VDB=0.284062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.1:7818105 chr01:007818105 0 W/7818105-7818105 FN2789-S SNP G -> A AC=1;AN=198;BQB=0.972502;DP=3678;DP4=1567,1895,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.35912e-05;MQSB=0.750356;RPB=0.807572;SGB=25.7687;VDB=0.675225;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R107|136|LOC_Os01g13950|protein_coding|CODING|LOC_Os01g13950.1|1|1) FN2715-S.SNP.1:7819929 chr01:007819929 0 W/7819929-7819929 FN2715-S SNP C -> A AC=1;AN=200;BQB=0.562986;DP=4865;DP4=2417,2097,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27198e-08;MQSB=0.990123;RPB=0.0550257;SGB=-33.7362;VDB=0.0475598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.1:7823136 chr01:007823136 0 W/7823136-7823136 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1340-S.SNP.1:7824111 chr01:007824111 0 W/7824111-7824111 FN1340-S Single Base Substitution C-T INTRON HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN-124.SNP.1:7826180 chr01:007826180 0 W/7826180-7826180 FN-124 Single Base Substitution A-G INTRON HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN-198.SNP.1:7827317 chr01:007827317 0 W/7827317-7827317 FN-198 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g13960 retrotransposon protein, putative, unclassified, expressed SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-198.SNP.1:7827318 chr01:007827318 0 W/7827318-7827318 FN-198 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN4037-S.SNP.1:7830247 chr01:007830247 0 W/7830247-7830247 FN4037-S SNP G -> A AC=1;AN=168;BQB=0.967704;DP=2609;DP4=1291,1260,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00153315;MQB=1.15088e-05;MQSB=0.25469;RPB=0.947425;SGB=24.4556;VDB=0.167265;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V628|1139|LOC_Os01g13970|protein_coding|CODING|LOC_Os01g13970.1|2|1) FN2545-S.SNP.1:7831353 chr01:007831353 0 W/7831353-7831353 FN2545-S SNP A -> C AC=1;AN=198;BQB=0.398327;DP=3821;DP4=1813,1740,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.84737e-10;MQSB=0.803009;RPB=0.186043;SGB=31.9395;VDB=0.582925;EFF=INTRON(MODIFIER||||1139|LOC_Os01g13970|protein_coding|CODING|LOC_Os01g13970.1|1|1) FN909-S.SNP.1:7834258 chr01:007834258 0 W/7834258-7834258 FN909-S Single Base Substitution T-C INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. W470-2-1.SNP.1:7835814 chr01:007835814 0 W/7835814-7835814 W470-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-268.SNP.1:7837533 chr01:007837533 0 W/7837533-7837533 FN-268 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g13990 retrotransposon protein, putative, unclassified, expressed SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1545-S.SNP.1:7838755 chr01:007838755 0 W/7838755-7838755 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN3721-S.SNP.1:7839440 chr01:007839440 0 W/7839440-7839440 FN3721-S SNP G -> A AC=1;AN=190;BQB=0.991246;DP=2851;DP4=1557,1135,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.1743e-09;MQSB=0.979337;RPB=0.857739;SGB=46.7622;VDB=0.442372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.1:7845313 chr01:007845313 0 W/7845313-7845313 FN1478-S Single Base Substitution A-C INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2611-S.SNP.1:7849847 chr01:007849847 0 W/7849847-7849847 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.996885;DP=4685;DP4=2297,2112,5,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.48667e-12;MQSB=0.210723;RPB=0.987711;SGB=17.5158;VDB=0.707316;EFF=UTR_3_PRIME(MODIFIER||168||495|LOC_Os01g14010|protein_coding|CODING|LOC_Os01g14010.1|3|1) FN576-S.SNP.1:7852020 chr01:007852020 0 W/7852020-7852020 FN576-S Single Base Substitution A-T INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN-399.SNP.1:7856971 chr01:007856971 0 W/7856971-7856971 FN-399 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g14030 DUF260 domain containing protein, putative, expressed SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.1:7856971 chr01:007856971 0 W/7856971-7856971 FN399-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g14030 DUF260 domain containing protein, putative, expressed SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1156-S.SNP.1:7863095 chr01:007863095 0 W/7863095-7863095 FN1156-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g14050 C2 domain containing protein, putative, expressed SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN903-S.SNP.1:7863400 chr01:007863400 0 W/7863400-7863400 FN903-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g14050 C2 domain containing protein, putative, expressed SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN-69.SNP.1:7870421 chr01:007870421 0 W/7870421-7870421 FN-69 Single Base Substitution C-T INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1321-S.SNP.1:7870984 chr01:007870984 0 W/7870984-7870984 FN1321-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3784-S.SNP.1:7874774 chr01:007874774 0 W/7874774-7874774 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.865974;DP=2808;DP4=1391,1244,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22794e-05;MQSB=0.775605;RPB=0.412829;SGB=28.9929;VDB=0.46283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.1:7875153 chr01:007875153 0 W/7875153-7875153 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.926872;DP=3924;DP4=1778,1963,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71358e-08;MQSB=0.651759;RPB=0.591123;SGB=43.7442;VDB=0.0998166;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.1:7883468 chr01:007883468 0 W/7883468-7883468 FN1180-S Single Base Substitution T-C INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1445-S.SNP.1:7888829 chr01:007888829 0 W/7888829-7888829 FN1445-S Single Base Substitution G-A INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN4120-S.SNP.1:7892882 chr01:007892882 0 W/7892882-7892882 FN4120-S SNP C -> T AC=2;AN=182;BQB=0.975522;DP=2792;DP4=1322,1391,16,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.91565e-20;MQSB=0.978751;RPB=0.965575;SGB=98.8232;VDB=0.792078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P227L|445|LOC_Os01g14090|protein_coding|CODING|LOC_Os01g14090.1|4|1) FN1429-S.SNP.1:7895699 chr01:007895699 0 W/7895699-7895699 FN1429-S Single Base Substitution G-A INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1216-S.SNP.1:7909056 chr01:007909056 0 W/7909056-7909056 FN1216-S Single Base Substitution T-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN894-S.SNP.1:7927811 chr01:007927811 0 W/7927811-7927811 FN894-S Single Base Substitution T-G INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN3861-S.SNP.1:7930209 chr01:007930209 0 W/7930209-7930209 FN3861-S SNP T -> A AC=2;AN=158;BQB=0.987998;DP=2564;DP4=1215,1194,11,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.44005e-10;MQSB=0.985455;RPB=0.830852;SGB=30.927;VDB=0.788805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:7943915 chr01:007943915 0 W/7943915-7943915 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.987442;DP=3676;DP4=2060,1379,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.41157e-05;MQSB=0.0774887;RPB=0.841988;SGB=18.3316;VDB=0.364656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.1:7946871 chr01:007946871 0 W/7946871-7946871 FN3534-S SNP C -> T AC=1;AN=188;BQB=0.676455;DP=3434;DP4=1409,1901,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.50707e-10;MQSB=0.370052;RPB=0.815715;SGB=103.498;VDB=0.415358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A29T|442|LOC_Os01g14180|protein_coding|CODING|LOC_Os01g14180.1|1|1) FN3385-S.SNP.1:7986579 chr01:007986579 0 W/7986579-7986579 FN3385-S SNP A -> C AC=1;AN=184;BQB=0.950744;DP=2875;DP4=1209,1480,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.61223e-09;MQSB=0.990327;RPB=0.849503;SGB=46.3132;VDB=0.887629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.1:7987320 chr01:007987320 0 W/7987320-7987320 FN1379-S Single Base Substitution C-T INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2688-S.SNP.1:7987572 chr01:007987572 0 W/7987572-7987572 FN2688-S SNP T -> A AC=1;AN=200;BQB=0.658496;DP=4712;DP4=2479,2058,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.96108e-06;MQSB=0.754644;RPB=0.728914;SGB=21.6694;VDB=0.948835;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.1:7991525 chr01:007991525 0 W/7991525-7991525 FN1384-S Single Base Substitution G-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2481.SNP.1:7991618 chr01:007991618 0 W/7991618-7991618 FN2481 SNP C -> A AC=2;AN=200;BQB=0.337549;DP=4530;DP4=1813,2274,14,22;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0456954;MQB=0.0448745;MQSB=0.983239;RPB=0.728328;SGB=119.583;VDB=0.254452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.1:7995128 chr01:007995128 0 W/7995128-7995128 FN2440 SNP C -> T AC=1;AN=200;BQB=0.0206592;DP=4656;DP4=2074,2271,15,19;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0173969;MQB=0.0178309;MQSB=6.42062e-09;RPB=0.998006;SGB=-3.42751;VDB=0.485482;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V435|971|LOC_Os01g14260|protein_coding|CODING|LOC_Os01g14260.1|5|1) FN1053-S.SNP.1:7997199 chr01:007997199 0 W/7997199-7997199 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN4122-S.SNP.1:7998924 chr01:007998924 0 W/7998924-7998924 FN4122-S SNP G -> C AC=1;AN=182;BQB=0.992997;DP=2575;DP4=1569,927,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.10042e-06;MQSB=0.99879;RPB=0.975049;SGB=44.1115;VDB=0.0275968;EFF=INTRON(MODIFIER||||628|LOC_Os01g14270|protein_coding|CODING|LOC_Os01g14270.1|7|1) FN2376.SNP.1:7999320 chr01:007999320 0 W/7999320-7999320 FN2376 SNP T -> G AC=1;AN=192;BQB=0.977915;DP=4942;DP4=2738,1775,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000202347;MQB=4.25354e-06;MQSB=0.973345;RPB=0.883857;SGB=7.3548;VDB=0.47161;EFF=INTRON(MODIFIER||||628|LOC_Os01g14270|protein_coding|CODING|LOC_Os01g14270.1|7|1) FN2183-S.SNP.1:8000123 chr01:008000123 0 W/8000123-8000123 FN2183-S SNP C -> G AC=1;AN=190;BQB=0.963656;DP=3650;DP4=1695,1534,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.32118e-09;MQSB=0.0193391;RPB=0.950958;SGB=33.8752;VDB=0.176817;EFF=INTRON(MODIFIER||||628|LOC_Os01g14270|protein_coding|CODING|LOC_Os01g14270.1|7|1) FN2375.SNP.1:8004635 chr01:008004635 0 W/8004635-8004635 FN2375 SNP G -> T AC=1;AN=192;BQB=0.703133;DP=4618;DP4=2261,2059,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.9484e-09;MQSB=0.428754;RPB=0.12156;SGB=72.0322;VDB=0.789746;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T194|378|LOC_Os01g14280|protein_coding|CODING|LOC_Os01g14280.1|1|1) FN3940-S.SNP.1:8008843 chr01:008008843 0 W/8008843-8008843 FN3940-S SNP C -> T AC=2;AN=158;BQB=0.561755;DP=2552;DP4=1183,1267,13,11;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.065047;MQB=6.90496e-05;MQSB=7.05511e-31;RPB=0.977884;SGB=71.1374;VDB=0.696562;EFF=INTRON(MODIFIER||||402|LOC_Os01g14290|protein_coding|CODING|LOC_Os01g14290.1|4|1) FN3940-S.SNP.1:8008844 chr01:008008844 0 W/8008844-8008844 FN3940-S SNP A -> T AC=2;AN=158;BQB=0.649688;DP=2565;DP4=1183,1277,14,11;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.0619883;MQB=0.00028659;MQSB=4.43154e-30;RPB=0.979723;SGB=45.1437;VDB=0.71564;EFF=INTRON(MODIFIER||||402|LOC_Os01g14290|protein_coding|CODING|LOC_Os01g14290.1|4|1) FN2554-S.SNP.1:8012023 chr01:008012023 0 W/8012023-8012023 FN2554-S SNP A -> G AC=1;AN=198;BQB=0.829725;DP=3791;DP4=1793,1660,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.56033e-12;MQSB=0.699724;RPB=0.939483;SGB=72.5051;VDB=0.515943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.1:8014915 chr01:008014915 0 W/8014915-8014915 FN3430-S SNP T -> A AC=1;AN=184;BQB=0.999978;DP=2141;DP4=1460,479,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.88484e-07;MQSB=0.862799;RPB=0.959516;SGB=66.8296;VDB=0.239184;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.1:8015454 chr01:008015454 0 W/8015454-8015454 FN4106-S SNP T -> C AC=2;AN=182;BQB=0.949918;DP=1962;DP4=812,1062,5,10;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000509684;MQB=4.46545e-07;MQSB=0.869037;RPB=0.972653;SGB=42.6494;VDB=0.86919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.1:8021990 chr01:008021990 0 W/8021990-8021990 FN2245-S SNP T -> A AC=1;AN=190;BQB=0.95595;DP=4372;DP4=2146,1903,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31992e-08;MQSB=0.126057;RPB=0.755234;SGB=8.77275;VDB=0.592677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.1:8030658 chr01:008030658 0 W/8030658-8030658 FN1478-S Single Base Substitution C-T INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2533-S.SNP.1:8039391 chr01:008039391 0 W/8039391-8039391 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.999168;DP=3519;DP4=1679,1483,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0107985;MQB=0.0128691;MQSB=5.44703e-09;RPB=0.626214;SGB=18.5788;VDB=0.153811;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G100|403|LOC_Os01g14340|protein_coding|CODING|LOC_Os01g14340.1|1|1|WARNING_TRANSCRIPT_INCOMPLETE) FN3537-S.SNP.1:8042091 chr01:008042091 0 W/8042091-8042091 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.998151;DP=2484;DP4=1228,1152,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000402576;MQB=7.98644e-05;MQSB=1.9407e-05;RPB=0.1612;SGB=44.4357;VDB=0.0856353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.1:8042139 chr01:008042139 0 W/8042139-8042139 FN2139-S SNP G -> A AC=1;AN=168;BQB=0.150759;DP=1571;DP4=1074,442,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92007e-05;MQSB=0.942491;RPB=0.901847;SGB=-16.665;VDB=0.479047;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.1:8042190 chr01:008042190 0 W/8042190-8042190 FN1243-S Single Base Substitution C-G INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN524-S.SNP.1:8042262 chr01:008042262 0 W/8042262-8042262 FN524-S Single Base Substitution G-A INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1045-S.SNP.1:8053270 chr01:008053270 0 W/8053270-8053270 FN1045-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3951-S.SNP.1:8057757 chr01:008057757 0 W/8057757-8057757 FN3951-S SNP T -> C AC=1;AN=168;BQB=0.629983;DP=3155;DP4=1794,1165,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02e-07;MQSB=0.942235;RPB=0.837231;SGB=4.1907;VDB=0.398125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y60C|70|LOC_Os01g14380|protein_coding|CODING|LOC_Os01g14380.1|1|1) FN2390.SNP.1:8066512 chr01:008066512 0 W/8066512-8066512 FN2390 SNP C -> A AC=1;AN=200;BQB=0.976124;DP=4948;DP4=2403,2249,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22887e-20;MQSB=0.937795;RPB=0.950011;SGB=68.5625;VDB=0.0878859;EFF=INTRON(MODIFIER||||315|LOC_Os01g14420|protein_coding|CODING|LOC_Os01g14420.1|3|1) FN2390.SNP.1:8066513 chr01:008066513 0 W/8066513-8066513 FN2390 SNP C -> T AC=1;AN=200;BQB=0.99763;DP=4963;DP4=2395,2258,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.37241e-20;MQSB=0.837586;RPB=0.979762;SGB=101.557;VDB=0.0532975;EFF=INTRON(MODIFIER||||315|LOC_Os01g14420|protein_coding|CODING|LOC_Os01g14420.1|3|1) FN1516-S.SNP.1:8067011 chr01:008067011 0 W/8067011-8067011 FN1516-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g14420 RWP-RK domain-containing protein, putative, expressed SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN4043-S.SNP.1:8079092 chr01:008079092 0 W/8079092-8079092 FN4043-S SNP A -> C AC=1;AN=168;BQB=0.986551;DP=2669;DP4=1401,1088,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.74537e-10;MQSB=0.948219;RPB=0.399451;SGB=58.7637;VDB=0.080746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3533-S.SNP.1:8079454 chr01:008079454 0 W/8079454-8079454 FN3533-S SNP G -> A AC=1;AN=188;BQB=0.985357;DP=3335;DP4=1357,1890,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65924e-05;MQSB=0.961841;RPB=0.999563;SGB=30.8063;VDB=0.183821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.1:8088859 chr01:008088859 0 W/8088859-8088859 FN1669-S SNP A -> T AC=1;AN=188;BQB=0.123484;DP=3250;DP4=1821,1393,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.95111e-05;MQSB=0.994733;RPB=0.873337;SGB=13.3597;VDB=0.838691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.1:8090802 chr01:008090802 0 W/8090802-8090802 FN1514-S Single Base Substitution G-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4166-S.SNP.1:8094062 chr01:008094062 0 W/8094062-8094062 FN4166-S SNP T -> C AC=1;AN=170;BQB=0.988754;DP=2410;DP4=1153,1203,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.20338e-09;MQSB=0.893815;RPB=0.743155;SGB=61.2001;VDB=0.569208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E1067G|1220|LOC_Os01g14450|protein_coding|CODING|LOC_Os01g14450.1|1|1) FN2438.SNP.1:8097508 chr01:008097508 0 W/8097508-8097508 FN2438 SNP C -> T AC=1;AN=200;BQB=0.547227;DP=4248;DP4=2187,1821,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.47169e-11;MQSB=0.524353;RPB=0.97007;SGB=32.0901;VDB=0.450863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.1:8100793 chr01:008100793 0 W/8100793-8100793 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.99759;DP=3842;DP4=1469,1864,8,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01611e-15;MQSB=0.386682;RPB=0.181303;SGB=105.163;VDB=0.0176074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.1:8103542 chr01:008103542 0 W/8103542-8103542 FN3577-S SNP C -> A AC=1;AN=188;BQB=0.963665;DP=3148;DP4=1483,1618,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.02268e-08;MQSB=0.881614;RPB=0.528383;SGB=39.5276;VDB=0.973083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:8104305 chr01:008104305 0 W/8104305-8104305 FN3360-S SNP T -> C AC=1;AN=184;BQB=0.999733;DP=3072;DP4=1470,1501,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.16973e-09;MQSB=0.777327;RPB=0.90748;SGB=66.8296;VDB=0.0761508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.1:8113181 chr01:008113181 0 W/8113181-8113181 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.980307;DP=2819;DP4=1213,1512,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8016e-06;MQSB=0.908599;RPB=0.647808;SGB=44.4357;VDB=0.912116;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.1:8124512 chr01:008124512 0 W/8124512-8124512 FN798-S Single Base Substitution C-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3476-S.SNP.1:8131350 chr01:008131350 0 W/8131350-8131350 FN3476-S SNP T -> A AC=1;AN=184;BQB=0.979123;DP=864;DP4=211,591,1,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000815878;MQSB=0.578205;RPB=0.997949;SGB=21.6146;VDB=0.0989217;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.1:8139761 chr01:008139761 0 W/8139761-8139761 FN-143 Single Base Substitution G-T INTERGENIC HOMO SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-217.SNP.1:8142720 chr01:008142720 0 W/8142720-8142720 FN-217 Single Base Substitution C-T INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3993-S.SNP.1:8144089 chr01:008144089 0 W/8144089-8144089 FN3993-S SNP C -> A AC=1;AN=168;BQB=0.987536;DP=2545;DP4=1277,1157,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.88423e-06;MQSB=0.991272;RPB=0.742303;SGB=27.8864;VDB=0.0394594;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.1:8144979 chr01:008144979 0 W/8144979-8144979 FN4344-S SNP C -> A AC=1;AN=170;BQB=0.971498;DP=3105;DP4=1633,1387,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.15677e-11;MQSB=0.998191;RPB=0.3663;SGB=48.6486;VDB=0.156203;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.1:8147943 chr01:008147943 0 W/8147943-8147943 FN434-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g14530 AWPM-19-like membrane family protein, putative, expressed SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN2147-S.SNP.1:8148198 chr01:008148198 0 W/8148198-8148198 FN2147-S SNP T -> C AC=1;AN=168;BQB=0.527036;DP=3040;DP4=1349,1646,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.99949e-05;MQSB=0.761441;RPB=0.943009;SGB=19.7539;VDB=0.406197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.1:8151655 chr01:008151655 0 W/8151655-8151655 FN1540-S Single Base Substitution T-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN_N1-150-1.SNP.1:8168264 chr01:008168264 0 W/8168264-8168264 FN_N1-150-1 Single Base Substitution G-A HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2310.SNP.1:8168293 chr01:008168293 0 W/8168293-8168293 FN2310 SNP T -> A AC=2;AN=192;BQB=0.951199;DP=4723;DP4=2396,1993,38,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.30225e-25;MQSB=0.0161019;RPB=0.999588;SGB=231.784;VDB=0.60369;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.1:8170102 chr01:008170102 0 W/8170102-8170102 FN690-S Single Base Substitution T-C INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3811-S.SNP.1:8179376 chr01:008179376 0 W/8179376-8179376 FN3811-S SNP T -> A AC=1;AN=190;BQB=0.987847;DP=2623;DP4=1246,1304,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.01517e-09;MQSB=0.991887;RPB=0.109742;SGB=26.2136;VDB=0.154047;EFF=INTRON(MODIFIER||||211|LOC_Os01g14610|protein_coding|CODING|LOC_Os01g14610.1|8|1),INTRON(MODIFIER||||211|LOC_Os01g14610|protein_coding|CODING|LOC_Os01g14610.2|8|1) FN2231-S.SNP.1:8180671 chr01:008180671 0 W/8180671-8180671 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.995359;DP=4045;DP4=1648,2205,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.6959e-08;MQSB=0.969072;RPB=0.0727501;SGB=53.6492;VDB=0.585809;EFF=INTRON(MODIFIER||||211|LOC_Os01g14610|protein_coding|CODING|LOC_Os01g14610.1|4|1),INTRON(MODIFIER||||211|LOC_Os01g14610|protein_coding|CODING|LOC_Os01g14610.2|4|1) FN2639-S.SNP.1:8195159 chr01:008195159 0 W/8195159-8195159 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.717572;DP=4790;DP4=2339,2170,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25434e-16;MQSB=0.894175;RPB=0.632883;SGB=114.132;VDB=0.408127;EFF=INTERGENIC(MODIFIER||||||||||1) FN-396.SNP.1:8198908 chr01:008198908 0 W/8198908-8198908 FN-396 Single Base Substitution A-T INTERGENIC HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2637-S.SNP.1:8199910 chr01:008199910 0 W/8199910-8199910 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.44961;DP=4880;DP4=2322,2171,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.82196e-10;MQSB=0.454193;RPB=0.875514;SGB=17.5158;VDB=0.223785;EFF=INTERGENIC(MODIFIER||||||||||1) FN1738-S.SNP.1:8202017 chr01:008202017 0 W/8202017-8202017 FN1738-S SNP C -> G AC=1;AN=188;BQB=0.96651;DP=1714;DP4=744,922,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97149e-06;MQSB=0.992129;RPB=0.866149;SGB=18.4463;VDB=0.722375;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A224P|254|LOC_Os01g14660|protein_coding|CODING|LOC_Os01g14660.1|2|1) FN3391-S.SNP.1:8202370 chr01:008202370 0 W/8202370-8202370 FN3391-S SNP C -> A AC=1;AN=184;BQB=0.70119;DP=3244;DP4=1081,1768,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.0383e-06;MQSB=0.105498;RPB=0.143869;SGB=15.7097;VDB=0.237987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C106F|254|LOC_Os01g14660|protein_coding|CODING|LOC_Os01g14660.1|2|1) FN1272-S.SNP.1:8210443 chr01:008210443 0 W/8210443-8210443 FN1272-S Single Base Substitution A-T INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2429.SNP.1:8210628 chr01:008210628 0 W/8210628-8210628 FN2429 SNP A -> G AC=1;AN=200;BQB=0.99733;DP=4600;DP4=2516,1870,12,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28926e-09;MQSB=0.946484;RPB=0.998154;SGB=40.2696;VDB=0.537562;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.1:8211371 chr01:008211371 0 W/8211371-8211371 FN589-S Single Base Substitution C-T INTERGENIC HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN_546-3-1.SNP.1:8220751 chr01:008220751 0 W/8220751-8220751 FN_546-3-1 Single Base Substitution C-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2651-S.SNP.1:8224361 chr01:008224361 0 W/8224361-8224361 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.174886;DP=2980;DP4=1585,975,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00033557;MQB=2.06981e-06;MQSB=4.8637e-05;RPB=0.814798;SGB=-35.3156;VDB=0.516404;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.1:8227491 chr01:008227491 0 W/8227491-8227491 FN-264 Single Base Substitution T-A INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-264.SNP.1:8227492 chr01:008227492 0 W/8227492-8227492 FN-264 Single Base Substitution T-A INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-264.SNP.1:8227501 chr01:008227501 0 W/8227501-8227501 FN-264 Single Base Substitution G-A INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. 702-5-1.SNP.1:8233555 chr01:008233555 0 W/8233555-8233555 702-5-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1446, Mutant_ID: 702-5-1, Generation: M2, Mutations: 28, Genes: 10, Seed availability: Yes. 702-6.SNP.1:8233555 chr01:008233555 0 W/8233555-8233555 702-6 Single Base Substitution A-T INTERGENIC Homo SNo: 1447, Mutant_ID: 702-6, Generation: M2, Mutations: 26, Genes: 20, Seed availability: Yes. FN3505-S.SNP.1:8244365 chr01:008244365 0 W/8244365-8244365 FN3505-S SNP G -> T AC=1;AN=188;BQB=0.98107;DP=3466;DP4=1511,1865,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65677e-05;MQSB=0.962494;RPB=0.865976;SGB=25.3545;VDB=0.115319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.1:8245731 chr01:008245731 0 W/8245731-8245731 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.0715561;DP=4338;DP4=1847,2198,9,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.12857e-15;MQSB=0.0341673;RPB=0.985929;SGB=-7.88458;VDB=0.955302;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.1:8261170 chr01:008261170 0 W/8261170-8261170 FN4230-S SNP G -> T AC=1;AN=170;BQB=0.572969;DP=2915;DP4=1431,1409,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.000343053;MQB=0.338339;MQSB=0.000238888;RPB=0.42211;SGB=38.3207;VDB=0.415823;EFF=START_GAINED(LOW||||1570|LOC_Os01g14770|protein_coding|CODING|LOC_Os01g14770.1|2|1),UTR_5_PRIME(MODIFIER||1787||1570|LOC_Os01g14770|protein_coding|CODING|LOC_Os01g14770.1|2|1) FN2541-S.SNP.1:8265518 chr01:008265518 0 W/8265518-8265518 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.758531;DP=4033;DP4=1850,1971,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8625e-06;MQSB=0.531815;RPB=0.659714;SGB=25.7687;VDB=0.052315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.1:8272420 chr01:008272420 0 W/8272420-8272420 FN2735-S SNP T -> G AC=1;AN=200;BQB=0.950548;DP=5012;DP4=2387,2413,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199521;MQB=2.22177e-12;MQSB=0.941395;RPB=0.920992;SGB=79.9264;VDB=0.741904;EFF=UTR_3_PRIME(MODIFIER||91||100|LOC_Os01g14790|protein_coding|CODING|LOC_Os01g14790.1|3|1) FN1032-S.SNP.1:8275003 chr01:008275003 0 W/8275003-8275003 FN1032-S Single Base Substitution C-T INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2475.SNP.1:8283699 chr01:008283699 0 W/8283699-8283699 FN2475 SNP T -> G AC=1;AN=200;BQB=0.638724;DP=4712;DP4=2220,2232,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63502e-08;MQSB=0.996975;RPB=0.672483;SGB=63.4749;VDB=0.101078;EFF=UTR_3_PRIME(MODIFIER||1684||579|LOC_Os01g14810|protein_coding|CODING|LOC_Os01g14810.3|17|1),UTR_3_PRIME(MODIFIER||1684||579|LOC_Os01g14810|protein_coding|CODING|LOC_Os01g14810.2|18|1),UTR_3_PRIME(MODIFIER||183||637|LOC_Os01g14810|protein_coding|CODING|LOC_Os01g14810.1|17|1) FN3863-S.SNP.1:8284863 chr01:008284863 0 W/8284863-8284863 FN3863-S SNP T -> G AC=1;AN=158;BQB=0.962718;DP=2602;DP4=981,1286,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.7822e-08;MQSB=0.922448;RPB=0.760629;SGB=-39.7928;VDB=0.072686;EFF=INTRON(MODIFIER||||463|LOC_Os01g14820|protein_coding|CODING|LOC_Os01g14820.1|1|1) FN990-S.SNP.1:8304479 chr01:008304479 0 W/8304479-8304479 FN990-S Single Base Substitution G-T INTERGENIC HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN1478-S.SNP.1:8305887 chr01:008305887 0 W/8305887-8305887 FN1478-S Single Base Substitution C-T UTR_3_PRIME Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN923-S.SNP.1:8313411 chr01:008313411 0 W/8313411-8313411 FN923-S Single Base Substitution T-C INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN786-S.SNP.1:8324780 chr01:008324780 0 W/8324780-8324780 FN786-S Single Base Substitution A-G INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3715-S.SNP.1:8333217 chr01:008333217 0 W/8333217-8333217 FN3715-S SNP A -> G AC=1;AN=190;BQB=0.364128;DP=2866;DP4=1447,1162,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20309e-16;MQSB=0.993686;RPB=0.763544;SGB=82.301;VDB=0.000291178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N363S|408|LOC_Os01g14860|protein_coding|CODING|LOC_Os01g14860.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N363S|408|LOC_Os01g14860|protein_coding|CODING|LOC_Os01g14860.2|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N363S|408|LOC_Os01g14860|protein_coding|CODING|LOC_Os01g14860.3|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N291S|336|LOC_Os01g14860|protein_coding|CODING|LOC_Os01g14860.4|12|1) FN1314-S.SNP.1:8341373 chr01:008341373 0 W/8341373-8341373 FN1314-S Single Base Substitution A-G INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-175.SNP.1:8344476 chr01:008344476 0 W/8344476-8344476 FN-175 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g14890 expressed protein SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2486.SNP.1:8344476 chr01:008344476 0 W/8344476-8344476 FN2486 SNP C -> A AC=2;AN=200;BQB=0.238785;DP=4231;DP4=2381,1644,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.57362e-22;MQSB=0.818099;RPB=0.954002;SGB=206.235;VDB=0.0905683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H55Q|322|LOC_Os01g14890|protein_coding|CODING|LOC_Os01g14890.1|2|1) FN4095-S.SNP.1:8344476 chr01:008344476 0 W/8344476-8344476 FN4095-S SNP C -> A AC=1;AN=182;BQB=0.957578;DP=3097;DP4=1870,1178,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.47355e-06;MQSB=0.883334;RPB=0.97699;SGB=35.0899;VDB=0.787088;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H55Q|322|LOC_Os01g14890|protein_coding|CODING|LOC_Os01g14890.1|2|1) FN4187-S.SNP.1:8347868 chr01:008347868 0 W/8347868-8347868 FN4187-S SNP G -> A AC=2;AN=170;BQB=0.988354;DP=2232;DP4=1204,943,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.54169e-13;MQSB=0.999817;RPB=0.905945;SGB=96.7413;VDB=0.87987;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.1:8354037 chr01:008354037 0 W/8354037-8354037 FN-363 Single Base Substitution T-A INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN3829-S.SNP.1:8354037 chr01:008354037 0 W/8354037-8354037 FN3829-S SNP T -> A AC=1;AN=190;BQB=0.97553;DP=3005;DP4=1513,1366,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73633e-06;MQSB=0.988215;RPB=0.857545;SGB=2.55724;VDB=0.808233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.1:8358521 chr01:008358521 0 W/8358521-8358521 FN1521-S Single Base Substitution C-G INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2199-S.SNP.1:8363452 chr01:008363452 0 W/8363452-8363452 FN2199-S SNP A -> T AC=1;AN=190;BQB=0.472542;DP=5096;DP4=2496,2323,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26885e-05;MQSB=0.97151;RPB=0.978733;SGB=23.6597;VDB=0.570146;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.1:8375894 chr01:008375894 0 W/8375894-8375894 FN4021-S SNP T -> A AC=1;AN=168;BQB=0.950027;DP=2278;DP4=961,1223,1,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.78066e-06;MQSB=0.895822;RPB=0.857569;SGB=38.8805;VDB=0.549935;EFF=INTERGENIC(MODIFIER||||||||||1) FN-23.SNP.1:8379618 chr01:008379618 0 W/8379618-8379618 FN-23 Single Base Substitution A-G INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-380.SNP.1:8381621 chr01:008381621 0 W/8381621-8381621 FN-380 Single Base Substitution G-A INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2296.SNP.1:8389398 chr01:008389398 0 W/8389398-8389398 FN2296 SNP C -> T AC=2;AN=192;BQB=0.562696;DP=4863;DP4=2496,1746,22,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.96893e-21;MQSB=0.997496;RPB=0.992577;SGB=110.973;VDB=0.972258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.1:8391799 chr01:008391799 0 W/8391799-8391799 FN3711-S SNP A -> G AC=2;AN=190;BQB=0.934957;DP=2863;DP4=1368,1370,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.32955e-19;MQSB=0.98744;RPB=0.99994;SGB=77.2911;VDB=0.542157;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.1:8401183 chr01:008401183 0 W/8401183-8401183 FN-370 Single Base Substitution G-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.1:8401185 chr01:008401185 0 W/8401185-8401185 FN-370 Single Base Substitution A-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3743-S.SNP.1:8404549 chr01:008404549 0 W/8404549-8404549 FN3743-S SNP C -> G AC=1;AN=190;BQB=0.952662;DP=2502;DP4=1285,1133,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87076e-05;MQSB=0.993989;RPB=0.997223;SGB=30.8803;VDB=0.37366;EFF=START_GAINED(LOW||||707|LOC_Os01g15000|protein_coding|CODING|LOC_Os01g15000.1|1|1),UTR_5_PRIME(MODIFIER||35||707|LOC_Os01g15000|protein_coding|CODING|LOC_Os01g15000.1|1|1) FN4231-S.SNP.1:8412263 chr01:008412263 0 W/8412263-8412263 FN4231-S SNP G -> A AC=2;AN=170;BQB=0.981229;DP=2639;DP4=1372,1160,20,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.90269e-22;MQSB=0.999319;RPB=0.247499;SGB=117.502;VDB=0.472249;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.1:8426231 chr01:008426231 0 W/8426231-8426231 FN1549-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g15020 lissencephaly type-1-like homology motif, putative, expressed SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2464.SNP.1:8430482 chr01:008430482 0 W/8430482-8430482 FN2464 SNP A -> G AC=1;AN=200;BQB=0.992816;DP=4319;DP4=1330,1845,17,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.92116e-14;MQSB=0.406172;RPB=0.0328502;SGB=-73.6537;VDB=0.0854261;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.1:8430483 chr01:008430483 0 W/8430483-8430483 FN2464 SNP G -> A AC=2;AN=200;BQB=0.994332;DP=4318;DP4=1900,2080,13,11;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.61788e-13;MQSB=0.587696;RPB=0.232818;SGB=104.921;VDB=0.0419789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.1:8430484 chr01:008430484 0 W/8430484-8430484 FN2464 SNP C -> A AC=2;AN=200;BQB=0.168641;DP=4320;DP4=1842,2017,11,11;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.27611e-12;MQSB=0.780518;RPB=0.572039;SGB=69.1109;VDB=0.0104607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.1:8431899 chr01:008431899 0 W/8431899-8431899 FN2353 SNP A -> G AC=1;AN=192;BQB=0.960971;DP=5072;DP4=2363,2473,7,2;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.39239e-05;MQSB=0.957114;RPB=0.920987;SGB=21.9585;VDB=0.340487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.1:8435159 chr01:008435159 0 W/8435159-8435159 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.795514;DP=2656;DP4=1536,977,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.40562e-07;MQSB=0.911454;RPB=0.989905;SGB=21.4493;VDB=0.666373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:8443596 chr01:008443596 0 W/8443596-8443596 FN-170 Single Base Substitution A-G INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3387-S.SNP.1:8449250 chr01:008449250 0 W/8449250-8449250 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.953721;DP=3170;DP4=1482,1578,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.37802e-07;MQSB=0.885796;RPB=0.711233;SGB=48.7425;VDB=0.929226;EFF=INTRON(MODIFIER||||611|LOC_Os01g15039|protein_coding|CODING|LOC_Os01g15039.1|1|1) FN4181-S.SNP.1:8450756 chr01:008450756 0 W/8450756-8450756 FN4181-S SNP T -> C AC=1;AN=170;BQB=0.878639;DP=2423;DP4=773,1307,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000993529;MQSB=0.702845;RPB=0.156252;SGB=-16.5469;VDB=0.330159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N245S|611|LOC_Os01g15039|protein_coding|CODING|LOC_Os01g15039.1|1|1) FN2655-S.SNP.1:8464897 chr01:008464897 0 W/8464897-8464897 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.989326;DP=4649;DP4=2262,2102,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.33797e-17;MQSB=0.985104;RPB=0.384239;SGB=114.132;VDB=0.191323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.1:8464898 chr01:008464898 0 W/8464898-8464898 FN2655-S SNP G -> T AC=1;AN=200;BQB=0.321108;DP=4642;DP4=2223,2151,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.47673e-18;MQSB=0.913668;RPB=0.389062;SGB=87.1368;VDB=0.220392;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.1:8467618 chr01:008467618 0 W/8467618-8467618 FN3564-S SNP T -> A AC=1;AN=188;BQB=0.985016;DP=4807;DP4=2181,2520,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0850843;MQB=0.749589;MQSB=1.79807e-08;RPB=0.866669;SGB=35.9843;VDB=0.418727;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.1:8467909 chr01:008467909 0 W/8467909-8467909 FN244-S Single Base Substitution G-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2780-S.SNP.1:8470263 chr01:008470263 0 W/8470263-8470263 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.89346;DP=4395;DP4=1949,2244,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000227531;MQB=1.20091e-08;MQSB=0.942525;RPB=0.680378;SGB=18.9639;VDB=0.635306;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.1:8470528 chr01:008470528 0 W/8470528-8470528 FN671-S Single Base Substitution C-T INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2648-S.SNP.1:8472791 chr01:008472791 0 W/8472791-8472791 FN2648-S SNP C -> G AC=2;AN=200;BQB=0.880008;DP=4942;DP4=1982,2682,14,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.61026e-22;MQSB=0.962337;RPB=0.999454;SGB=130.399;VDB=0.640252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.1:8473051 chr01:008473051 0 W/8473051-8473051 FN3423-S SNP C -> T AC=1;AN=184;BQB=0.678937;DP=3451;DP4=1898,1471,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000289771;MQB=1.83849e-05;MQSB=0.396278;RPB=0.825097;SGB=30.6558;VDB=0.169891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.1:8473052 chr01:008473052 0 W/8473052-8473052 FN3423-S SNP C -> T AC=1;AN=184;BQB=0.299695;DP=3457;DP4=1876,1471,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000289268;MQB=7.45876e-08;MQSB=0.480465;RPB=0.994553;SGB=-0.806606;VDB=0.52337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.1:8474087 chr01:008474087 0 W/8474087-8474087 FN2177-S SNP A -> G AC=1;AN=168;BQB=0.535125;DP=2819;DP4=1662,1106,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00141894;MQB=6.20798e-05;MQSB=5.23472e-08;RPB=0.977237;SGB=29.4772;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.1:8474938 chr01:008474938 0 W/8474938-8474938 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.393635;DP=4298;DP4=2051,2023,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.48559e-10;MQSB=0.990263;RPB=0.686751;SGB=24.1541;VDB=0.00792538;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.1:8475008 chr01:008475008 0 W/8475008-8475008 FN781-S Single Base Substitution C-T INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2083-S.SNP.1:8484389 chr01:008484389 0 W/8484389-8484389 FN2083-S SNP C -> T AC=2;AN=168;BQB=0.780526;DP=3277;DP4=1901,1307,22,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.32825e-24;MQSB=0.892384;RPB=0.133326;SGB=-3.74047;VDB=0.451144;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.1:8484784 chr01:008484784 0 W/8484784-8484784 FN4185-S SNP C -> A AC=2;AN=170;BQB=0.785739;DP=2433;DP4=1088,1274,5,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.17983e-11;MQSB=0.992984;RPB=0.810006;SGB=52.0913;VDB=0.624965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.1:8489118 chr01:008489118 0 W/8489118-8489118 FN1383-S Single Base Substitution G-A INTRON HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN4119-S.SNP.1:8494936 chr01:008494936 0 W/8494936-8494936 FN4119-S SNP C -> T AC=1;AN=182;BQB=0.965744;DP=2982;DP4=1426,1489,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.11658e-08;MQSB=0.888167;RPB=0.694585;SGB=35.6277;VDB=0.500601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.1:8494937 chr01:008494937 0 W/8494937-8494937 FN4119-S SNP A -> T AC=1;AN=182;BQB=0.454659;DP=2981;DP4=1416,1483,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.20391e-07;MQSB=0.829554;RPB=0.873987;SGB=32.1169;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.1:8506395 chr01:008506395 0 W/8506395-8506395 FN-196 Single Base Substitution A-C INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. W475-4-2.SNP.1:8514905 chr01:008514905 0 W/8514905-8514905 W475-4-2 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g15180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN-90.SNP.1:8515809 chr01:008515809 0 W/8515809-8515809 FN-90 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g15190 retrotransposon protein, putative, unclassified, expressed SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1334-S.SNP.1:8516017 chr01:008516017 0 W/8516017-8516017 FN1334-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g15190 retrotransposon protein, putative, unclassified, expressed SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1283-S.SNP.1:8519462 chr01:008519462 0 W/8519462-8519462 FN1283-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1283-S.SNP.1:8519463 chr01:008519463 0 W/8519463-8519463 FN1283-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN425-S.SNP.1:8521412 chr01:008521412 0 W/8521412-8521412 FN425-S Single Base Substitution C-T INTRON HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1394-S.SNP.1:8526520 chr01:008526520 0 W/8526520-8526520 FN1394-S Single Base Substitution C-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3571-S.SNP.1:8527194 chr01:008527194 0 W/8527194-8527194 FN3571-S SNP A -> G AC=1;AN=188;BQB=0.567129;DP=3323;DP4=1645,1523,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.29898e-06;MQSB=0.0225342;RPB=0.472721;SGB=-0.634963;VDB=0.434979;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.1:8530731 chr01:008530731 0 W/8530731-8530731 FN598-S Single Base Substitution A-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3987-S.SNP.1:8533560 chr01:008533560 0 W/8533560-8533560 FN3987-S SNP G -> A AC=1;AN=168;BQB=0.957905;DP=2619;DP4=1203,1292,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.93533e-13;MQSB=0.855265;RPB=0.91788;SGB=72.4869;VDB=0.0216079;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.1:8537912 chr01:008537912 0 W/8537912-8537912 FN503-S Single Base Substitution T-C INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN1276-S.SNP.1:8550017 chr01:008550017 0 W/8550017-8550017 FN1276-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3630-S.SNP.1:8556067 chr01:008556067 0 W/8556067-8556067 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.960574;DP=3385;DP4=1714,1544,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.21203e-05;MQSB=0.963415;RPB=0.741607;SGB=21.8853;VDB=0.286826;EFF=INTRON(MODIFIER||||114|LOC_Os01g15290|protein_coding|CODING|LOC_Os01g15290.2|1|1),INTRON(MODIFIER||||114|LOC_Os01g15290|protein_coding|CODING|LOC_Os01g15290.1|1|1) FN1496-S.SNP.1:8561063 chr01:008561063 0 W/8561063-8561063 FN1496-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g15300 zinc finger helicase family protein, putative, expressed SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2129-S.SNP.1:8564741 chr01:008564741 0 W/8564741-8564741 FN2129-S SNP A -> G AC=1;AN=168;BQB=0.943401;DP=3891;DP4=2032,1810,13,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.703e-17;MQSB=0.99502;RPB=0.872344;SGB=28.5146;VDB=0.130227;EFF=INTRON(MODIFIER||||1007|LOC_Os01g15300|protein_coding|CODING|LOC_Os01g15300.1|7|1),INTRON(MODIFIER||||989|LOC_Os01g15300|protein_coding|CODING|LOC_Os01g15300.2|7|1) FN-168.SNP.1:8568663 chr01:008568663 0 W/8568663-8568663 FN-168 Single Base Substitution A-C INTRON HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2212-S.SNP.1:8570019 chr01:008570019 0 W/8570019-8570019 FN2212-S SNP A -> G AC=1;AN=190;BQB=0.319432;DP=4556;DP4=2000,2221,28,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32184e-28;MQSB=0.469718;RPB=0.956042;SGB=-52.831;VDB=0.112113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.1:8579251 chr01:008579251 0 W/8579251-8579251 FN3713-S SNP A -> G AC=1;AN=190;BQB=0.877833;DP=3036;DP4=1490,1379,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.81851e-14;MQSB=0.99648;RPB=0.962999;SGB=68.0854;VDB=0.316931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.1:8582575 chr01:008582575 0 W/8582575-8582575 FN1263-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN974-S.SNP.1:8584822 chr01:008584822 0 W/8584822-8584822 FN974-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g15330 expressed protein SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3903-S.SNP.1:8586370 chr01:008586370 0 W/8586370-8586370 FN3903-S SNP C -> T AC=1;AN=158;BQB=0.8955;DP=2057;DP4=964,1001,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.26154e-08;MQSB=0.479643;RPB=0.841071;SGB=55.806;VDB=0.961824;EFF=UTR_3_PRIME(MODIFIER||147||109|LOC_Os01g15340|protein_coding|CODING|LOC_Os01g15340.1|1|1) FN1173-S.SNP.1:8590527 chr01:008590527 0 W/8590527-8590527 FN1173-S Single Base Substitution G-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2385.SNP.1:8602463 chr01:008602463 0 W/8602463-8602463 FN2385 SNP G -> A AC=1;AN=192;BQB=0.530138;DP=5025;DP4=2325,2453,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.97633e-09;MQSB=0.999944;RPB=0.998959;SGB=50.4731;VDB=0.618655;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.1:8603244 chr01:008603244 0 W/8603244-8603244 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.123879;DP=4551;DP4=1899,2152,17,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.00128e-19;MQSB=0.347459;RPB=0.962597;SGB=87.5066;VDB=0.578232;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:8604426 chr01:008604426 0 W/8604426-8604426 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.988031;DP=3041;DP4=1510,1419,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=27;MQ0F=0.200921;MQB=0.921835;MQSB=0;RPB=0.992805;SGB=53.182;VDB=0.853664;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.1:8604426 chr01:008604426 0 W/8604426-8604426 FN713-S Single Base Substitution C-T INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN-212.SNP.1:8614433 chr01:008614433 0 W/8614433-8614433 FN-212 Single Base Substitution G-T INTRON HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN4140-S.SNP.1:8615358 chr01:008615358 0 W/8615358-8615358 FN4140-S SNP C -> T AC=1;AN=170;BQB=0.954152;DP=2874;DP4=1307,1458,9,17;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00939457;MQB=9.01633e-07;MQSB=2.32315e-08;RPB=0.795038;SGB=49.1957;VDB=0.390292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T37M|72|LOC_Os01g15370|protein_coding|CODING|LOC_Os01g15370.1|2|1) FN-63.SNP.1:8621688 chr01:008621688 0 W/8621688-8621688 FN-63 Single Base Substitution G-C INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN491-S.SNP.1:8621692 chr01:008621692 0 W/8621692-8621692 FN491-S Single Base Substitution G-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2147-S.SNP.1:8626347 chr01:008626347 0 W/8626347-8626347 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.169867;DP=2669;DP4=1428,1195,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.4502e-06;MQSB=0.914871;RPB=0.992175;SGB=43.3113;VDB=0.927044;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.1:8632954 chr01:008632954 0 W/8632954-8632954 FN1536-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3510-S.SNP.1:8661627 chr01:008661627 0 W/8661627-8661627 FN3510-S SNP T -> A AC=1;AN=188;BQB=0.929326;DP=2852;DP4=1392,1342,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75767e-09;MQSB=0.786144;RPB=0.589129;SGB=28.6195;VDB=0.0889505;EFF=INTRON(MODIFIER||||476|LOC_Os01g15460|protein_coding|CODING|LOC_Os01g15460.1|6|1),INTRON(MODIFIER||||476|LOC_Os01g15460|protein_coding|CODING|LOC_Os01g15460.2|6|1),INTRON(MODIFIER||||464|LOC_Os01g15460|protein_coding|CODING|LOC_Os01g15460.3|5|1) FN1745-S.SNP.1:8673298 chr01:008673298 0 W/8673298-8673298 FN1745-S SNP C -> T AC=2;AN=188;BQB=0.853654;DP=2473;DP4=506,1932,6,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.39499e-11;MQSB=0.483536;RPB=0.696234;SGB=17.8846;VDB=0.864903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.1:8675229 chr01:008675229 0 W/8675229-8675229 FN1692-S SNP G -> A AC=1;AN=188;BQB=0.879329;DP=2769;DP4=1889,851,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.73134e-06;MQSB=0.0284044;RPB=0.927724;SGB=35.9843;VDB=0.797017;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.1:8675325 chr01:008675325 0 W/8675325-8675325 FN1282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN_1017-1.SNP.1:8675325 chr01:008675325 0 W/8675325-8675325 FN_1017-1 Single Base Substitution C-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3946-S.SNP.1:8675641 chr01:008675641 0 W/8675641-8675641 FN3946-S SNP T -> A AC=2;AN=168;BQB=0.830643;DP=2456;DP4=1261,1095,12,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.37019e-12;MQSB=0.999119;RPB=0.999001;SGB=87.6193;VDB=0.203514;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.1:8679649 chr01:008679649 0 W/8679649-8679649 FN1385-S Single Base Substitution G-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1385-S.SNP.1:8679651 chr01:008679651 0 W/8679651-8679651 FN1385-S Single Base Substitution A-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1665-S.SNP.1:8681983 chr01:008681983 0 W/8681983-8681983 FN1665-S Single Base Substitution G-A INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3447-S.SNP.1:8683424 chr01:008683424 0 W/8683424-8683424 FN3447-S SNP A -> G AC=2;AN=184;BQB=0.821821;DP=2692;DP4=1314,1255,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.16252e-12;MQSB=0.964917;RPB=0.685869;SGB=43.4494;VDB=0.677092;EFF=UTR_5_PRIME(MODIFIER||646||407|LOC_Os01g15470|protein_coding|CODING|LOC_Os01g15470.2|1|1),INTRON(MODIFIER||||407|LOC_Os01g15470|protein_coding|CODING|LOC_Os01g15470.3|1|1),INTRON(MODIFIER||||455|LOC_Os01g15470|protein_coding|CODING|LOC_Os01g15470.1|1|1) FN1442-S.SNP.1:8689271 chr01:008689271 0 W/8689271-8689271 FN1442-S Single Base Substitution A-G INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1258-S.SNP.1:8701008 chr01:008701008 0 W/8701008-8701008 FN1258-S Single Base Substitution G-A INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2606-S.SNP.1:8707284 chr01:008707284 0 W/8707284-8707284 FN2606-S SNP A -> C AC=1;AN=198;BQB=0.937414;DP=4258;DP4=2125,1963,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71326e-05;MQSB=0.993387;RPB=0.230965;SGB=11.1786;VDB=0.00324447;EFF=INTRON(MODIFIER||||502|LOC_Os01g15490|protein_coding|CODING|LOC_Os01g15490.1|1|1),INTRON(MODIFIER||||499|LOC_Os01g15490|protein_coding|CODING|LOC_Os01g15490.2|1|1),INTRON(MODIFIER||||480|LOC_Os01g15490|protein_coding|CODING|LOC_Os01g15490.3|1|1) FN2639-S.SNP.1:8712903 chr01:008712903 0 W/8712903-8712903 FN2639-S SNP A -> T AC=1;AN=200;BQB=0.443892;DP=5030;DP4=2511,2300,22,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.76912e-20;MQSB=0.84375;RPB=0.925703;SGB=71.1676;VDB=0.706739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.1:8714329 chr01:008714329 0 W/8714329-8714329 FN2181-S SNP A -> T AC=1;AN=190;BQB=0.992428;DP=4818;DP4=2379,2072,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7582e-12;MQSB=0.846631;RPB=0.982004;SGB=68.0854;VDB=0.589542;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.1:8715728 chr01:008715728 0 W/8715728-8715728 FN3751-S SNP T -> C AC=1;AN=190;BQB=0.999352;DP=3081;DP4=1377,1504,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.08647e-05;MQSB=0.552278;RPB=0.994246;SGB=21.8853;VDB=0.787088;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P279|369|LOC_Os01g15510|protein_coding|CODING|LOC_Os01g15510.1|2|1) W276-2-1.SNP.1:8728659 chr01:008728659 0 W/8728659-8728659 W276-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1680-S.SNP.1:8730591 chr01:008730591 0 W/8730591-8730591 FN1680-S SNP T -> A AC=1;AN=188;BQB=0.790256;DP=3476;DP4=1459,1947,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.85475e-10;MQSB=0.963605;RPB=0.667633;SGB=-11.74;VDB=0.208539;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.1:8730592 chr01:008730592 0 W/8730592-8730592 FN2191-S SNP A -> T AC=1;AN=190;BQB=0.879171;DP=4704;DP4=2161,2198,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.08847e-14;MQSB=0.983721;RPB=0.49264;SGB=19.6499;VDB=0.204482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.1:8742485 chr01:008742485 0 W/8742485-8742485 FN1619-S Single Base Substitution T-C INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-180.SNP.1:8744288 chr01:008744288 0 W/8744288-8744288 FN-180 Single Base Substitution T-G INTERGENIC HOMO SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3669-S.SNP.1:8748510 chr01:008748510 0 W/8748510-8748510 FN3669-S SNP C -> T AC=2;AN=190;BQB=0.241694;DP=2417;DP4=1175,1149,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.94854e-08;MQSB=0.625767;RPB=0.129031;SGB=5.66499;VDB=0.222646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.1:8751484 chr01:008751484 0 W/8751484-8751484 FN3384-S SNP G -> A AC=1;AN=184;BQB=0.91453;DP=3493;DP4=1456,1949,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.27053e-07;MQSB=0.934382;RPB=0.821255;SGB=13.188;VDB=0.827669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R111H|1292|LOC_Os01g15580|protein_coding|CODING|LOC_Os01g15580.1|1|1) FN570-S.SNP.1:8770062 chr01:008770062 0 W/8770062-8770062 FN570-S Single Base Substitution T-C INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN-206.SNP.1:8783293 chr01:008783293 0 W/8783293-8783293 FN-206 Single Base Substitution A-T INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-399.SNP.1:8786000 chr01:008786000 0 W/8786000-8786000 FN-399 Single Base Substitution T-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN-399.SNP.1:8786002 chr01:008786002 0 W/8786002-8786002 FN-399 Single Base Substitution C-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN901-S.SNP.1:8792102 chr01:008792102 0 W/8792102-8792102 FN901-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3095-S.SNP.1:8795404 chr01:008795404 0 W/8795404-8795404 FN3095-S SNP A -> G AC=2;AN=184;BQB=0.976822;DP=2515;DP4=1286,1117,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.83613e-17;MQSB=0.310304;RPB=0.547188;SGB=134.656;VDB=0.0393254;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T127|489|LOC_Os01g15640|protein_coding|CODING|LOC_Os01g15640.1|3|1) FN2589-S.SNP.1:8796821 chr01:008796821 0 W/8796821-8796821 FN2589-S SNP A -> G AC=1;AN=198;BQB=0.765692;DP=3323;DP4=1284,1767,1,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000464222;MQSB=0.439448;RPB=0.153971;SGB=18.5788;VDB=0.530911;EFF=INTRON(MODIFIER||||489|LOC_Os01g15640|protein_coding|CODING|LOC_Os01g15640.1|1|1) FN687-S.SNP.1:8801112 chr01:008801112 0 W/8801112-8801112 FN687-S Single Base Substitution G-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN276-S.SNP.1:8815421 chr01:008815421 0 W/8815421-8815421 FN276-S Single Base Substitution G-A INTERGENIC HOMO SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-172.SNP.1:8815830 chr01:008815830 0 W/8815830-8815830 FN-172 Single Base Substitution G-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN-172.SNP.1:8815831 chr01:008815831 0 W/8815831-8815831 FN-172 Single Base Substitution A-T INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN4108-S.SNP.1:8826827 chr01:008826827 0 W/8826827-8826827 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.999982;DP=6178;DP4=2968,3059,22,19;HOB=6.03792e-05;ICB=0.000121422;MQ=22;MQ0F=0.112658;MQB=0.797112;MQSB=0.255394;RPB=0.71597;SGB=179.437;VDB=0.209062;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R299*|1544|LOC_Os01g15690|protein_coding|CODING|LOC_Os01g15690.1|2|1);LOF=(LOC_Os01g15690|LOC_Os01g15690|1|1.00);NMD=(LOC_Os01g15690|LOC_Os01g15690|1|1.00) FN-170.SNP.1:8828234 chr01:008828234 0 W/8828234-8828234 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN773-S.SNP.1:8831568 chr01:008831568 0 W/8831568-8831568 FN773-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g15700 transposon protein, putative, Pong sub-class, expressed SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2104-S.SNP.1:8832118 chr01:008832118 0 W/8832118-8832118 FN2104-S SNP A -> T AC=2;AN=168;BQB=0.99592;DP=2983;DP4=944,1997,7,22;HOB=0.0235261;ICB=0.494119;MQ=23;MQ0F=0.335568;MQB=0.468279;MQSB=0;RPB=0.591517;SGB=22.7913;VDB=0.547017;EFF=INTRON(MODIFIER||||300|LOC_Os01g15700|protein_coding|CODING|LOC_Os01g15700.1|5|1) FN1401-S.SNP.1:8838973 chr01:008838973 0 W/8838973-8838973 FN1401-S Single Base Substitution G-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3722-S.SNP.1:8844083 chr01:008844083 0 W/8844083-8844083 FN3722-S SNP G -> T AC=1;AN=190;BQB=0.999356;DP=3002;DP4=1468,1389,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00666223;MQB=0.000495349;MQSB=2.39317e-06;RPB=0.996246;SGB=76.4186;VDB=0.285863;EFF=INTRON(MODIFIER||||943|LOC_Os01g15720|protein_coding|CODING|LOC_Os01g15720.1|3|1) FN815-S.SNP.1:8853433 chr01:008853433 0 W/8853433-8853433 FN815-S Single Base Substitution A-G INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3393-S.SNP.1:8857971 chr01:008857971 0 W/8857971-8857971 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.76695;DP=3364;DP4=2111,1102,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=1.67841e-06;MQSB=0.472172;RPB=0.940587;SGB=20.7533;VDB=0.717994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.1:8864873 chr01:008864873 0 W/8864873-8864873 FN2640-S SNP C -> G AC=2;AN=200;BQB=0.921129;DP=3117;DP4=1841,1062,27,20;HOB=0.0198;ICB=0.495051;MQ=29;MQ0F=0.176131;MQB=0.715022;MQSB=3.30596e-16;RPB=0.703401;SGB=205.265;VDB=0.00571772;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L201|1031|LOC_Os01g15750|protein_coding|CODING|LOC_Os01g15750.1|1|1) FN360-S.SNP.1:8876792 chr01:008876792 0 W/8876792-8876792 FN360-S Single Base Substitution T-C INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN906-S.SNP.1:8881700 chr01:008881700 0 W/8881700-8881700 FN906-S Single Base Substitution A-G INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. W276-2-1.SNP.1:8901173 chr01:008901173 0 W/8901173-8901173 W276-2-1 Single Base Substitution T-A INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2454.SNP.1:8901292 chr01:008901292 0 W/8901292-8901292 FN2454 SNP G -> A AC=1;AN=200;BQB=0.274022;DP=3893;DP4=1397,2198,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36314e-07;MQSB=0.11073;RPB=0.89728;SGB=58.2954;VDB=0.967692;EFF=SPLICE_SITE_DONOR(HIGH||||242|LOC_Os01g15800|protein_coding|CODING|LOC_Os01g15800.1|2|1),INTRON(MODIFIER||||242|LOC_Os01g15800|protein_coding|CODING|LOC_Os01g15800.1|2|1);LOF=(LOC_Os01g15800|LOC_Os01g15800|1|1.00) FN1261-S.SNP.1:8904628 chr01:008904628 0 W/8904628-8904628 FN1261-S Single Base Substitution T-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN525-S.SNP.1:8914910 chr01:008914910 0 W/8914910-8914910 FN525-S Single Base Substitution C-T INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3897-S.SNP.1:8921853 chr01:008921853 0 W/8921853-8921853 FN3897-S SNP G -> T AC=1;AN=158;BQB=0.708573;DP=2258;DP4=1152,1044,12,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.38091e-13;MQSB=0.995751;RPB=0.552476;SGB=38.0354;VDB=0.341278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q1174K|1260|LOC_Os01g15840|protein_coding|CODING|LOC_Os01g15840.1|1|1) FN-56.SNP.1:8930690 chr01:008930690 0 W/8930690-8930690 FN-56 Single Base Substitution C-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN416-S.SNP.1:8936411 chr01:008936411 0 W/8936411-8936411 FN416-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. W466-5-1.SNP.1:8952929 chr01:008952929 0 W/8952929-8952929 W466-5-1 Single Base Substitution T-C INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN391-S.SNP.1:8954081 chr01:008954081 0 W/8954081-8954081 FN391-S Single Base Substitution T-A INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN391-S.SNP.1:8954086 chr01:008954086 0 W/8954086-8954086 FN391-S Single Base Substitution T-A INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1546-S.SNP.1:8964850 chr01:008964850 0 W/8964850-8964850 FN1546-S Single Base Substitution A-T INTRON HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN229-S.SNP.1:8971369 chr01:008971369 0 W/8971369-8971369 FN229-S Single Base Substitution T-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN3630-S.SNP.1:8983405 chr01:008983405 0 W/8983405-8983405 FN3630-S SNP C -> T AC=2;AN=190;BQB=0.984767;DP=3069;DP4=1462,1462,7,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.70739e-06;MQSB=0.874516;RPB=0.371282;SGB=76.4186;VDB=0.617477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.1:8985568 chr01:008985568 0 W/8985568-8985568 FN3835-S SNP A -> T AC=1;AN=190;BQB=0.981984;DP=2757;DP4=1352,1288,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.51714e-07;MQSB=0.952042;RPB=0.813967;SGB=25.439;VDB=0.952152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.1:8996973 chr01:008996973 0 W/8996973-8996973 FN-316 Single Base Substitution G-T UTR_3_PRIME HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2183-S.SNP.1:9003112 chr01:009003112 0 W/9003112-9003112 FN2183-S SNP A -> C AC=1;AN=190;BQB=0.970592;DP=4887;DP4=2656,1844,24,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36598e-19;MQSB=0.696418;RPB=0.988884;SGB=176.604;VDB=0.948474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.1:9003330 chr01:009003330 0 W/9003330-9003330 FN2347 SNP C -> T AC=1;AN=192;BQB=0.717248;DP=5291;DP4=2577,2447,31,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.36108e-18;MQSB=0.783809;RPB=0.995343;SGB=-46.6547;VDB=0.310588;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.1:9004685 chr01:009004685 0 W/9004685-9004685 FN_807-3-1 Single Base Substitution G-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN-217.SNP.1:9016948 chr01:009016948 0 W/9016948-9016948 FN-217 Single Base Substitution T-C INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1215-S.SNP.1:9038391 chr01:009038391 0 W/9038391-9038391 FN1215-S Single Base Substitution A-C INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN707-S.SNP.1:9044620 chr01:009044620 0 W/9044620-9044620 FN707-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN3808-S.SNP.1:9055383 chr01:009055383 0 W/9055383-9055383 FN3808-S SNP G -> A AC=1;AN=190;BQB=0.949746;DP=2878;DP4=1425,1368,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000162081;MQSB=0.99504;RPB=0.987524;SGB=26.3271;VDB=0.885613;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.1:9055591 chr01:009055591 0 W/9055591-9055591 FN239-S Single Base Substitution C-T INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2691-S.SNP.1:9055591 chr01:009055591 0 W/9055591-9055591 FN2691-S SNP C -> T AC=2;AN=200;BQB=0.993738;DP=4197;DP4=1604,2209,23,17;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.68891e-08;MQSB=0.987304;RPB=0.0907827;SGB=89.4038;VDB=0.820598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.1:9073993 chr01:009073993 0 W/9073993-9073993 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.990924;DP=4633;DP4=2137,2213,10,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=0.00174158;MQSB=0.46568;RPB=0.807846;SGB=54.6902;VDB=0.517842;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.1:9075944 chr01:009075944 0 W/9075944-9075944 FN566-S Single Base Substitution G-A INTRON HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN566-S.SNP.1:9075945 chr01:009075945 0 W/9075945-9075945 FN566-S Single Base Substitution G-A INTRON HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1568-S.SNP.1:9084020 chr01:009084020 0 W/9084020-9084020 FN1568-S Single Base Substitution A-C INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2500.SNP.1:9089141 chr01:009089141 0 W/9089141-9089141 FN2500 SNP C -> A AC=1;AN=200;BQB=0.0250838;DP=4788;DP4=2175,2390,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.70752e-05;MQSB=0.958223;RPB=0.675942;SGB=4.67442;VDB=0.863003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.1:9096328 chr01:009096328 0 W/9096328-9096328 FN3825-S SNP A -> G AC=1;AN=190;BQB=0.937768;DP=2970;DP4=1425,1401,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.92591e-11;MQSB=0.98537;RPB=0.941688;SGB=103.742;VDB=0.262874;EFF=START_GAINED(LOW||||403|LOC_Os01g16124|protein_coding|CODING|LOC_Os01g16124.1|3|1),UTR_5_PRIME(MODIFIER||1740||403|LOC_Os01g16124|protein_coding|CODING|LOC_Os01g16124.1|3|1) FN1300-S.SNP.1:9097463 chr01:009097463 0 W/9097463-9097463 FN1300-S Single Base Substitution A-T START_GAINED HOMO LOC_Os01g16124 retrotransposon protein, putative, unclassified, expressed SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3938-S.SNP.1:9107878 chr01:009107878 0 W/9107878-9107878 FN3938-S SNP C -> T AC=2;AN=158;BQB=0.83538;DP=2530;DP4=1174,1248,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.91074e-09;MQSB=0.99726;RPB=0.984587;SGB=82.0227;VDB=0.00669061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.1:9122200 chr01:009122200 0 W/9122200-9122200 FN3900-S SNP T -> C AC=2;AN=158;BQB=0.69596;DP=2311;DP4=753,1482,7,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.51138e-08;MQSB=0.95756;RPB=0.927043;SGB=73.2838;VDB=0.164699;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.1:9125007 chr01:009125007 0 W/9125007-9125007 FN573-S Single Base Substitution C-T INTERGENIC HOMO SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1565-S.SNP.1:9134165 chr01:009134165 0 W/9134165-9134165 FN1565-S Single Base Substitution C-T INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN-273.SNP.1:9146398 chr01:009146398 0 W/9146398-9146398 FN-273 Single Base Substitution A-C INTERGENIC HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN4163-S.SNP.1:9150620 chr01:009150620 0 W/9150620-9150620 FN4163-S SNP T -> C AC=1;AN=170;BQB=0.988973;DP=2365;DP4=1060,1210,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000845666;MQB=7.572e-06;MQSB=0.726442;RPB=0.933485;SGB=27.9928;VDB=0.98651;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.1:9151283 chr01:009151283 0 W/9151283-9151283 FN565-S Single Base Substitution T-C INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN-338.SNP.1:9154466 chr01:009154466 0 W/9154466-9154466 FN-338 Single Base Substitution A-C INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2335.SNP.1:9161576 chr01:009161576 0 W/9161576-9161576 FN2335 SNP C -> T AC=1;AN=192;BQB=0.981446;DP=5220;DP4=2539,2352,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.29341e-09;MQSB=0.7669;RPB=0.240946;SGB=58.3392;VDB=0.231988;EFF=START_GAINED(LOW||||764|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.1|1|1),UTR_5_PRIME(MODIFIER||449||764|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.1|1|1),INTRON(MODIFIER||||764|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.2|1|1),INTRON(MODIFIER||||753|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.3|2|1),INTRON(MODIFIER||||753|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.4|2|1) FN2190-S.SNP.1:9163063 chr01:009163063 0 W/9163063-9163063 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.999551;DP=4410;DP4=2034,2124,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.53011e-15;MQSB=0.221227;RPB=0.880049;SGB=121.957;VDB=0.411751;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V347I|764|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V347I|764|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V336I|753|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V336I|753|LOC_Os01g16180|protein_coding|CODING|LOC_Os01g16180.4|3|1) FN2735-S.SNP.1:9168536 chr01:009168536 0 W/9168536-9168536 FN2735-S SNP G -> A AC=2;AN=200;BQB=0.433379;DP=4804;DP4=2485,2114,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07321e-23;MQSB=0.999949;RPB=0.992258;SGB=44.8037;VDB=0.799613;EFF=INTRON(MODIFIER||||307|LOC_Os01g16190|protein_coding|CODING|LOC_Os01g16190.1|3|1) FN732-S.SNP.1:9170404 chr01:009170404 0 W/9170404-9170404 FN732-S Single Base Substitution C-A INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2234-S.SNP.1:9171936 chr01:009171936 0 W/9171936-9171936 FN2234-S SNP G -> A AC=2;AN=190;BQB=0.638324;DP=3344;DP4=1530,1460,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68315e-10;MQSB=0.108023;RPB=0.865469;SGB=108.296;VDB=0.992705;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P103|423|LOC_Os01g16200|protein_coding|CODING|LOC_Os01g16200.1|1|1) FN3543-S.SNP.1:9181567 chr01:009181567 0 W/9181567-9181567 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.430072;DP=3398;DP4=1335,1976,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00156439;MQSB=0.96477;RPB=0.943983;SGB=39.8925;VDB=0.748814;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A103V|455|LOC_Os01g16220|protein_coding|CODING|LOC_Os01g16220.1|1|1) FN1403-S.SNP.1:9181635 chr01:009181635 0 W/9181635-9181635 FN1403-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN-257.SNP.1:9186796 chr01:009186796 0 W/9186796-9186796 FN-257 Single Base Substitution C-T INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN792-S.SNP.1:9186814 chr01:009186814 0 W/9186814-9186814 FN792-S Single Base Substitution T-C INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN1151-S.SNP.1:9187031 chr01:009187031 0 W/9187031-9187031 FN1151-S Single Base Substitution T-C INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN4022-S.SNP.1:9204740 chr01:009204740 0 W/9204740-9204740 FN4022-S SNP A -> G AC=1;AN=168;BQB=0.98294;DP=2292;DP4=976,1217,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93329e-08;MQSB=0.992632;RPB=0.996817;SGB=41.6096;VDB=0.471439;EFF=INTRON(MODIFIER||||486|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.1|16|1),INTRON(MODIFIER||||414|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.2|16|1) FN-298.SNP.1:9204877 chr01:009204877 0 W/9204877-9204877 FN-298 Single Base Substitution G-T INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN-298.SNP.1:9204878 chr01:009204878 0 W/9204878-9204878 FN-298 Single Base Substitution T-A INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN-67.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN-67 Single Base Substitution G-A INTRON HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2790-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN2790-S SNP G -> A AC=2;AN=198;BQB=0.989321;DP=4001;DP4=1939,1802,33,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.07431e-29;MQSB=0.991712;RPB=0.993218;SGB=250.745;VDB=0.499699;EFF=INTRON(MODIFIER||||486|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.1|7|1),INTRON(MODIFIER||||414|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.2|7|1),INTRON(MODIFIER||||365|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.3|7|1) FN3564-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.989039;DP=2804;DP4=1481,1247,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.97903e-11;MQSB=0.999991;RPB=0.92809;SGB=80.782;VDB=0.985085;EFF=INTRON(MODIFIER||||486|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.1|7|1),INTRON(MODIFIER||||414|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.2|7|1),INTRON(MODIFIER||||365|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.3|7|1) FN3787-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.752628;DP=2766;DP4=1517,1148,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49923e-10;MQSB=0.990257;RPB=0.990687;SGB=60.9777;VDB=0.462817;EFF=INTRON(MODIFIER||||486|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.1|7|1),INTRON(MODIFIER||||414|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.2|7|1),INTRON(MODIFIER||||365|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.3|7|1) FN3998-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN3998-S SNP G -> A AC=2;AN=168;BQB=0.87726;DP=2788;DP4=1474,1187,14,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.92321e-14;MQSB=0.79546;RPB=0.754926;SGB=53.7853;VDB=0.855459;EFF=INTRON(MODIFIER||||486|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.1|7|1),INTRON(MODIFIER||||414|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.2|7|1),INTRON(MODIFIER||||365|LOC_Os01g16260|protein_coding|CODING|LOC_Os01g16260.3|7|1) FN432-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN432-S Single Base Substitution G-A INTRON HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN533-S.SNP.1:9208525 chr01:009208525 0 W/9208525-9208525 FN533-S Single Base Substitution G-A INTRON HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN475-S.SNP.1:9214305 chr01:009214305 0 W/9214305-9214305 FN475-S Single Base Substitution G-A INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN4234-S.SNP.1:9234106 chr01:009234106 0 W/9234106-9234106 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.641799;DP=2861;DP4=1392,1410,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.63869e-06;MQSB=0.997005;RPB=0.406082;SGB=47.8722;VDB=0.835187;EFF=INTRON(MODIFIER||||729|LOC_Os01g16290|protein_coding|CODING|LOC_Os01g16290.1|15|1),INTRON(MODIFIER||||616|LOC_Os01g16290|protein_coding|CODING|LOC_Os01g16290.2|15|1) FN_807-3-1.SNP.1:9235091 chr01:009235091 0 W/9235091-9235091 FN_807-3-1 Single Base Substitution G-A Homo LOC_Os01g16290 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2272-S.SNP.1:9235107 chr01:009235107 0 W/9235107-9235107 FN2272-S SNP A -> T AC=1;AN=190;BQB=0.284693;DP=5061;DP4=2571,2134,27,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.94243e-23;MQSB=0.89842;RPB=0.507211;SGB=50.7274;VDB=0.361223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y620F|729|LOC_Os01g16290|protein_coding|CODING|LOC_Os01g16290.1|18|1) FN1032-S.SNP.1:9239271 chr01:009239271 0 W/9239271-9239271 FN1032-S Single Base Substitution T-C INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3551-S.SNP.1:9249369 chr01:009249369 0 W/9249369-9249369 FN3551-S SNP A -> G AC=1;AN=188;BQB=0.999531;DP=2474;DP4=1079,1273,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.48902e-05;MQSB=0.996601;RPB=0.992617;SGB=8.27326;VDB=0.738889;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q464R|932|LOC_Os01g16310|protein_coding|CODING|LOC_Os01g16310.1|3|1) FN2640-S.SNP.1:9261962 chr01:009261962 0 W/9261962-9261962 FN2640-S SNP C -> G AC=1;AN=200;BQB=0.851839;DP=4191;DP4=2181,1786,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.21406e-12;MQSB=0.759836;RPB=0.900097;SGB=34.6953;VDB=0.707224;EFF=INTRON(MODIFIER||||292|LOC_Os01g16330|protein_coding|CODING|LOC_Os01g16330.1|4|1) FN523-S.SNP.1:9262940 chr01:009262940 0 W/9262940-9262940 FN523-S Single Base Substitution C-A INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.1:9262940 chr01:009262940 0 W/9262940-9262940 FN532-S Single Base Substitution C-A INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN523-S.SNP.1:9262941 chr01:009262941 0 W/9262941-9262941 FN523-S Single Base Substitution T-A INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.1:9262941 chr01:009262941 0 W/9262941-9262941 FN532-S Single Base Substitution T-A INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN-135.SNP.1:9278869 chr01:009278869 0 W/9278869-9278869 FN-135 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN-135.SNP.1:9278870 chr01:009278870 0 W/9278870-9278870 FN-135 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g16354 rab GDP dissociation inhibitor alpha, putative, expressed SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN3548-S.SNP.1:9286581 chr01:009286581 0 W/9286581-9286581 FN3548-S SNP C -> T AC=1;AN=188;BQB=0.993583;DP=2448;DP4=1327,963,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.94554e-08;MQSB=0.990844;RPB=0.931286;SGB=71.6954;VDB=0.659205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.1:9297352 chr01:009297352 0 W/9297352-9297352 FN2432 SNP A -> G AC=1;AN=200;BQB=0.622414;DP=4667;DP4=2254,2003,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.0401e-10;MQSB=0.962331;RPB=0.641973;SGB=61.9006;VDB=0.658208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T491A|776|LOC_Os01g16370|protein_coding|CODING|LOC_Os01g16370.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T491A|776|LOC_Os01g16370|protein_coding|CODING|LOC_Os01g16370.2|4|1) FN2092-S.SNP.1:9298103 chr01:009298103 0 W/9298103-9298103 FN2092-S SNP T -> C AC=1;AN=168;BQB=0.624713;DP=3275;DP4=1642,1599,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.49618e-09;MQSB=0.854758;RPB=0.503994;SGB=-40.6433;VDB=0.0397181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I741T|776|LOC_Os01g16370|protein_coding|CODING|LOC_Os01g16370.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I741T|776|LOC_Os01g16370|protein_coding|CODING|LOC_Os01g16370.2|4|1) FN1563-S.SNP.1:9307313 chr01:009307313 0 W/9307313-9307313 FN1563-S Single Base Substitution T-G SYNONYMOUS_CODING Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN-114.SNP.1:9318764 chr01:009318764 0 W/9318764-9318764 FN-114 Single Base Substitution C-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN4149-S.SNP.1:9318764 chr01:009318764 0 W/9318764-9318764 FN4149-S SNP C -> T AC=2;AN=170;BQB=0.950035;DP=2397;DP4=1221,1079,6,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.36573e-09;MQSB=0.858758;RPB=0.944341;SGB=56.7575;VDB=0.00648621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.1:9324593 chr01:009324593 0 W/9324593-9324593 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.680993;DP=4267;DP4=2005,1994,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.32362e-09;MQSB=0.89903;RPB=0.847866;SGB=31.9395;VDB=0.985228;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.1:9325581 chr01:009325581 0 W/9325581-9325581 FN744-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN854-S.SNP.1:9331679 chr01:009331679 0 W/9331679-9331679 FN854-S Single Base Substitution C-A INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3453-S.SNP.1:9335223 chr01:009335223 0 W/9335223-9335223 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.999992;DP=2984;DP4=1833,1060,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000335121;MQB=1.04551e-07;MQSB=0.861003;RPB=0.942726;SGB=57.786;VDB=0.827836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G15D|124|LOC_Os01g16440|protein_coding|CODING|LOC_Os01g16440.1|1|1) FN2637-S.SNP.1:9346232 chr01:009346232 0 W/9346232-9346232 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.98569;DP=4607;DP4=2173,2156,13,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.60808e-10;MQSB=0.506629;RPB=0.874959;SGB=81.8956;VDB=0.884425;EFF=INTRON(MODIFIER||||268|LOC_Os01g16460|protein_coding|CODING|LOC_Os01g16460.1|1|1) W7-1-1.SNP.1:9355664 chr01:009355664 0 W/9355664-9355664 W7-1-1 Single Base Substitution A-T INTRON HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2421.SNP.1:9367606 chr01:009367606 0 W/9367606-9367606 FN2421 SNP G -> T AC=2;AN=200;BQB=0.970412;DP=4336;DP4=1959,2054,18,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.74105e-27;MQSB=0.979303;RPB=0.825013;SGB=97.2193;VDB=0.487488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P289T|1513|LOC_Os01g16500|protein_coding|CODING|LOC_Os01g16500.1|2|1) FN2421.SNP.1:9367607 chr01:009367607 0 W/9367607-9367607 FN2421 SNP G -> T AC=2;AN=200;BQB=0.93906;DP=4333;DP4=1927,2099,20,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.20462e-29;MQSB=0.906192;RPB=0.984944;SGB=105.035;VDB=0.608955;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A288|1513|LOC_Os01g16500|protein_coding|CODING|LOC_Os01g16500.1|2|1) FN2531-S.SNP.1:9367653 chr01:009367653 0 W/9367653-9367653 FN2531-S SNP G -> C AC=1;AN=198;BQB=0.996151;DP=3711;DP4=1731,1813,5,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.76329e-13;MQSB=0.963847;RPB=0.998302;SGB=12.5396;VDB=0.253761;EFF=SPLICE_SITE_REGION(LOW||||1513|LOC_Os01g16500|protein_coding|CODING|LOC_Os01g16500.1|1|1),INTRON(MODIFIER||||1513|LOC_Os01g16500|protein_coding|CODING|LOC_Os01g16500.1|1|1) FN3305-S.SNP.1:9376393 chr01:009376393 0 W/9376393-9376393 FN3305-S SNP T -> A AC=1;AN=184;BQB=0.907425;DP=2786;DP4=1254,1441,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.14225e-10;MQSB=0.995471;RPB=0.989526;SGB=46.3132;VDB=0.317973;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D156V|715|LOC_Os01g16520|protein_coding|CODING|LOC_Os01g16520.1|5|1) FN3355-S.SNP.1:9377801 chr01:009377801 0 W/9377801-9377801 FN3355-S SNP T -> A AC=1;AN=184;BQB=0.76744;DP=2723;DP4=1473,1124,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.91125e-08;MQSB=0.939175;RPB=0.779052;SGB=66.8296;VDB=0.586065;EFF=INTRON(MODIFIER||||715|LOC_Os01g16520|protein_coding|CODING|LOC_Os01g16520.1|1|1) FN2711-S.SNP.1:9385404 chr01:009385404 0 W/9385404-9385404 FN2711-S SNP G -> T AC=1;AN=200;BQB=0.989841;DP=5078;DP4=2530,2309,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.32684e-07;MQSB=0.96848;RPB=0.893859;SGB=40.4492;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.1:9389035 chr01:009389035 0 W/9389035-9389035 FN2151-S SNP T -> A AC=1;AN=168;BQB=0.380354;DP=3552;DP4=1884,1629,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.38361e-14;MQSB=0.987721;RPB=0.693516;SGB=18.4989;VDB=0.480218;EFF=INTRON(MODIFIER||||451|LOC_Os01g16540|protein_coding|CODING|LOC_Os01g16540.1|6|1) FN3548-S.SNP.1:9390090 chr01:009390090 0 W/9390090-9390090 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.771281;DP=2586;DP4=1408,1089,15,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.0154e-12;MQSB=0.996605;RPB=0.936928;SGB=36.2493;VDB=0.828674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E379V|451|LOC_Os01g16540|protein_coding|CODING|LOC_Os01g16540.1|9|1) FN1046-S.SNP.1:9395740 chr01:009395740 0 W/9395740-9395740 FN1046-S Single Base Substitution C-A INTRON HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3472-S.SNP.1:9401968 chr01:009401968 0 W/9401968-9401968 FN3472-S SNP C -> A AC=1;AN=184;BQB=0.814313;DP=2933;DP4=1386,1425,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68516e-12;MQSB=0.999958;RPB=0.898079;SGB=67.4439;VDB=0.999382;EFF=INTERGENIC(MODIFIER||||||||||1) FN570-S.SNP.1:9404185 chr01:009404185 0 W/9404185-9404185 FN570-S Single Base Substitution A-G INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2597-S.SNP.1:9404844 chr01:009404844 0 W/9404844-9404844 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.405501;DP=4473;DP4=2301,1882,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.11809e-15;MQSB=0.802338;RPB=0.614177;SGB=104.69;VDB=0.883866;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.1:9408457 chr01:009408457 0 W/9408457-9408457 FN-92 Single Base Substitution C-T INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2260-S.SNP.1:9408457 chr01:009408457 0 W/9408457-9408457 FN2260-S SNP C -> T AC=2;AN=190;BQB=0.973653;DP=4849;DP4=2115,2328,34,62;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.8026e-45;MQSB=0.000177732;RPB=0.970476;SGB=215.902;VDB=0.184812;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.1:9408459 chr01:009408459 0 W/9408459-9408459 FN4132-S SNP G -> A AC=1;AN=182;BQB=0.986751;DP=3131;DP4=1635,1419,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.09882e-07;MQSB=0.930835;RPB=0.98716;SGB=28.6061;VDB=0.71094;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.1:9409008 chr01:009409008 0 W/9409008-9409008 FN953-S Single Base Substitution T-C INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3915-S.SNP.1:9422319 chr01:009422319 0 W/9422319-9422319 FN3915-S SNP A -> T AC=2;AN=158;BQB=0.052162;DP=2740;DP4=1492,1065,17,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.96337e-09;MQSB=0.900336;RPB=0.939138;SGB=52.2521;VDB=0.570238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.1:9431200 chr01:009431200 0 W/9431200-9431200 FN2308 SNP T -> C AC=2;AN=192;BQB=0.584079;DP=5014;DP4=2337,2446,24,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.54965e-21;MQSB=0.96708;RPB=0.354448;SGB=146.71;VDB=0.266027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.1:9434029 chr01:009434029 0 W/9434029-9434029 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.986809;DP=4926;DP4=2340,2367,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29917e-11;MQSB=0.806411;RPB=0.714769;SGB=86.5007;VDB=0.142598;EFF=UTR_3_PRIME(MODIFIER||132||218|LOC_Os01g16620|protein_coding|CODING|LOC_Os01g16620.4|2|1),UTR_3_PRIME(MODIFIER||132||218|LOC_Os01g16620|protein_coding|CODING|LOC_Os01g16620.5|2|1) FN2421.SNP.1:9438879 chr01:009438879 0 W/9438879-9438879 FN2421 SNP T -> A AC=2;AN=200;BQB=0.272695;DP=3967;DP4=1449,1730,26,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27504e-16;MQSB=0.209876;RPB=0.998041;SGB=-331.182;VDB=0.674107;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N101K|158|LOC_Os01g16630|protein_coding|CODING|LOC_Os01g16630.1|2|1) FN2421.SNP.1:9438880 chr01:009438880 0 W/9438880-9438880 FN2421 SNP G -> A AC=2;AN=200;BQB=0.492484;DP=3968;DP4=1843,1811,17,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.11129e-16;MQSB=0.506956;RPB=0.99873;SGB=60.747;VDB=0.833696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G102S|158|LOC_Os01g16630|protein_coding|CODING|LOC_Os01g16630.1|2|1) FN2583-S.SNP.1:9451083 chr01:009451083 0 W/9451083-9451083 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.248278;DP=4829;DP4=2238,2308,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23003e-16;MQSB=0.99458;RPB=0.231403;SGB=83.5316;VDB=0.739325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.1:9458496 chr01:009458496 0 W/9458496-9458496 FN2600-S SNP G -> A AC=1;AN=198;BQB=0.642372;DP=3958;DP4=1928,1817,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.40176e-05;MQSB=0.275954;RPB=0.440865;SGB=47.5102;VDB=0.981434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.1:9470130 chr01:009470130 0 W/9470130-9470130 FN1108-S Single Base Substitution T-G INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2631-S.SNP.1:9474257 chr01:009474257 0 W/9474257-9474257 FN2631-S SNP G -> T AC=2;AN=200;BQB=0.981454;DP=4691;DP4=2080,2354,20,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.76499e-32;MQSB=0.993477;RPB=0.295881;SGB=8.07072;VDB=0.55437;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.1:9474686 chr01:009474686 0 W/9474686-9474686 FN-403 Single Base Substitution G-T INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN-403.SNP.1:9474687 chr01:009474687 0 W/9474687-9474687 FN-403 Single Base Substitution A-T INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN3859-S.SNP.1:9482799 chr01:009482799 0 W/9482799-9482799 FN3859-S SNP A -> T AC=1;AN=158;BQB=0.99081;DP=2311;DP4=1181,1035,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.00848e-06;MQSB=0.888752;RPB=0.802215;SGB=30.704;VDB=0.768016;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I182|563|LOC_Os01g16690|protein_coding|CODING|LOC_Os01g16690.1|1|1) FN2421.SNP.1:9486205 chr01:009486205 0 W/9486205-9486205 FN2421 SNP C -> T AC=2;AN=200;BQB=0.380406;DP=4361;DP4=2169,1952,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.21111e-29;MQSB=0.882558;RPB=0.590715;SGB=107.64;VDB=0.334774;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.1:9487365 chr01:009487365 0 W/9487365-9487365 W278-3-1 Single Base Substitution A-C INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1406-S.SNP.1:9487499 chr01:009487499 0 W/9487499-9487499 FN1406-S Single Base Substitution C-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN-179.SNP.1:9494487 chr01:009494487 0 W/9494487-9494487 FN-179 Single Base Substitution C-T INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2637-S.SNP.1:9505101 chr01:009505101 0 W/9505101-9505101 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.935991;DP=3334;DP4=1582,1636,10,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00029994;MQB=3.33201e-09;MQSB=3.92986e-05;RPB=0.368613;SGB=61.9006;VDB=0.266887;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F624|1212|LOC_Os01g16740|protein_coding|CODING|LOC_Os01g16740.1|16|1) FN1333-S.SNP.1:9508248 chr01:009508248 0 W/9508248-9508248 FN1333-S Single Base Substitution C-A INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3768-S.SNP.1:9511865 chr01:009511865 0 W/9511865-9511865 FN3768-S SNP G -> T AC=1;AN=190;BQB=0.485303;DP=2712;DP4=1398,1187,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53072e-09;MQSB=0.885762;RPB=0.522291;SGB=41.5369;VDB=0.10177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.1:9518182 chr01:009518182 0 W/9518182-9518182 FN3875-S SNP T -> C AC=2;AN=158;BQB=0.894226;DP=2287;DP4=1055,1163,7,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.44953e-10;MQSB=0.907514;RPB=0.648061;SGB=73.2838;VDB=0.064561;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.1:9520560 chr01:009520560 0 W/9520560-9520560 FN_N1-213-1 Single Base Substitution C-T HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2579-S.SNP.1:9521838 chr01:009521838 0 W/9521838-9521838 FN2579-S SNP T -> C AC=2;AN=198;BQB=0.928379;DP=3971;DP4=1959,1787,28,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.45781e-29;MQSB=0.874437;RPB=0.999165;SGB=120.174;VDB=0.170871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3974-S.SNP.1:9522352 chr01:009522352 0 W/9522352-9522352 FN3974-S SNP T -> G AC=1;AN=168;BQB=0.998041;DP=2649;DP4=1117,1460,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44255e-05;MQSB=0.991;RPB=0.63594;SGB=30.0193;VDB=0.68766;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.1:9527006 chr01:009527006 0 W/9527006-9527006 FN-159 Single Base Substitution G-A INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN548-S.SNP.1:9527394 chr01:009527394 0 W/9527394-9527394 FN548-S Single Base Substitution A-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN2347.SNP.1:9529085 chr01:009529085 0 W/9529085-9529085 FN2347 SNP A -> T AC=2;AN=192;BQB=0.960697;DP=5400;DP4=2673,2366,39,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.1073e-34;MQSB=0.890387;RPB=0.975176;SGB=272.863;VDB=0.670811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.1:9534481 chr01:009534481 0 W/9534481-9534481 FN1537-S Single Base Substitution C-T INTRON HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN-257.SNP.1:9535255 chr01:009535255 0 W/9535255-9535255 FN-257 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g16780 retrotransposon protein, putative, unclassified, expressed SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2471.SNP.1:9537781 chr01:009537781 0 W/9537781-9537781 FN2471 SNP T -> C AC=1;AN=200;BQB=0.283144;DP=4499;DP4=2242,1958,21,17;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0780173;MQB=0.0252481;MQSB=2.68996e-06;RPB=0.334815;SGB=169.394;VDB=0.197528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I1662V|1845|LOC_Os01g16790|protein_coding|CODING|LOC_Os01g16790.1|4|1) FN2581-S.SNP.1:9542067 chr01:009542067 0 W/9542067-9542067 FN2581-S SNP T -> G AC=1;AN=198;BQB=0.886908;DP=3651;DP4=1572,1655,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.013421;MQB=0.317544;MQSB=7.49482e-38;RPB=0.682507;SGB=13.7737;VDB=0.132303;EFF=INTRON(MODIFIER||||1845|LOC_Os01g16790|protein_coding|CODING|LOC_Os01g16790.1|1|1) W443-5-1-3.SNP.1:9551170 chr01:009551170 0 W/9551170-9551170 W443-5-1-3 Single Base Substitution C-T INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2657-S.SNP.1:9560623 chr01:009560623 0 W/9560623-9560623 FN2657-S SNP C -> G AC=1;AN=200;BQB=0.447551;DP=4839;DP4=2442,2123,13,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.4495e-12;MQSB=0.11018;RPB=0.21994;SGB=87.1368;VDB=0.439001;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.1:9564805 chr01:009564805 0 W/9564805-9564805 FN4119-S SNP T -> A AC=1;AN=182;BQB=0.936154;DP=3203;DP4=1636,1426,9,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12933e-07;MQSB=0.998706;RPB=0.486227;SGB=28.6061;VDB=0.143787;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.1:9564806 chr01:009564806 0 W/9564806-9564806 FN4119-S SNP G -> A AC=1;AN=182;BQB=0.996652;DP=3181;DP4=1667,1437,7,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.00349e-06;MQSB=0.997929;RPB=0.716399;SGB=21.5845;VDB=0.347684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.1:9565726 chr01:009565726 0 W/9565726-9565726 FN1318-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2141-S.SNP.1:9574202 chr01:009574202 0 W/9574202-9574202 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.749215;DP=3039;DP4=1435,1549,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.317868;MQB=0.301163;MQSB=0;RPB=0.4958;SGB=22.1847;VDB=0.418627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1657-S.SNP.1:9574459 chr01:009574459 0 W/9574459-9574459 FN1657-S Single Base Substitution G-A INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN-194.SNP.1:9585204 chr01:009585204 0 W/9585204-9585204 FN-194 Single Base Substitution A-G INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN448-S.SNP.1:9587034 chr01:009587034 0 W/9587034-9587034 FN448-S Single Base Substitution C-T INTERGENIC HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3596-S.SNP.1:9587067 chr01:009587067 0 W/9587067-9587067 FN3596-S SNP A -> T AC=1;AN=188;BQB=0.674593;DP=2952;DP4=1615,1261,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.81774e-08;MQSB=0.959359;RPB=0.766023;SGB=2.45162;VDB=0.590152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.1:9590198 chr01:009590198 0 W/9590198-9590198 FN2441 SNP C -> T AC=1;AN=200;BQB=0.547407;DP=4053;DP4=1952,1902,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000246731;MQB=9.53281e-16;MQSB=0.261914;RPB=0.524768;SGB=58.1418;VDB=0.0887265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.1:9590693 chr01:009590693 0 W/9590693-9590693 FN1480-S Single Base Substitution G-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2257-S.SNP.1:9594991 chr01:009594991 0 W/9594991-9594991 FN2257-S SNP G -> T AC=2;AN=190;BQB=0.998739;DP=4991;DP4=2511,2075,27,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000200361;MQB=5.75946e-28;MQSB=0.987721;RPB=0.78351;SGB=110.492;VDB=0.429272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.1:9596281 chr01:009596281 0 W/9596281-9596281 FN2288 SNP A -> G AC=2;AN=192;BQB=0.236709;DP=4882;DP4=2313,2254,18,9;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.05834e-16;MQSB=0.844974;RPB=0.777306;SGB=117.676;VDB=0.548599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.1:9598032 chr01:009598032 0 W/9598032-9598032 FN3523-S SNP C -> A AC=2;AN=188;BQB=0.995005;DP=2629;DP4=1542,1013,9,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.42392e-12;MQSB=0.595501;RPB=0.7021;SGB=57.244;VDB=0.765831;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.1:9600807 chr01:009600807 0 W/9600807-9600807 FN1057-S Single Base Substitution G-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-227.SNP.1:9603230 chr01:009603230 0 W/9603230-9603230 FN-227 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g16840 microneme protein Sm70, putative, expressed SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN738-S.SNP.1:9611467 chr01:009611467 0 W/9611467-9611467 FN738-S Single Base Substitution T-A INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2264-S.SNP.1:9612365 chr01:009612365 0 W/9612365-9612365 FN2264-S SNP T -> A AC=2;AN=190;BQB=0.670697;DP=5039;DP4=2770,1812,21,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198452;MQB=5.56738e-20;MQSB=0.999898;RPB=0.978316;SGB=36.7425;VDB=0.413629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.1:9612366 chr01:009612366 0 W/9612366-9612366 FN2264-S SNP C -> A AC=2;AN=190;BQB=0.382197;DP=5042;DP4=2608,1777,25,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198334;MQB=3.55611e-18;MQSB=0.990438;RPB=0.616165;SGB=-89.2416;VDB=0.591254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.1:9617247 chr01:009617247 0 W/9617247-9617247 FN2370 SNP G -> A AC=1;AN=192;BQB=0.816024;DP=4907;DP4=2231,2432,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23306e-13;MQSB=0.954246;RPB=0.264494;SGB=41.7357;VDB=0.599872;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L1977F|2236|LOC_Os01g16850|protein_coding|CODING|LOC_Os01g16850.1|15|1) FN3889-S.SNP.1:9620966 chr01:009620966 0 W/9620966-9620966 FN3889-S SNP C -> T AC=2;AN=158;BQB=0.993624;DP=2735;DP4=1451,1180,19,13;HOB=0.024996;ICB=0.493752;MQ=35;MQ0F=0.0808044;MQB=0.931999;MQSB=1.78852e-25;RPB=0.438213;SGB=98.093;VDB=0.420711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1196T|2236|LOC_Os01g16850|protein_coding|CODING|LOC_Os01g16850.1|6|1) FN1570-S.SNP.1:9626936 chr01:009626936 0 W/9626936-9626936 FN1570-S Single Base Substitution A-G INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2301.SNP.1:9631487 chr01:009631487 0 W/9631487-9631487 FN2301 SNP A -> G AC=1;AN=192;BQB=0.604322;DP=5056;DP4=2480,2198,2,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28577e-06;MQSB=0.998681;RPB=0.828632;SGB=25.5227;VDB=0.990825;EFF=UTR_3_PRIME(MODIFIER||43||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.1|24|1),UTR_3_PRIME(MODIFIER||43||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.2|24|1),UTR_3_PRIME(MODIFIER||43||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.3|24|1),UTR_3_PRIME(MODIFIER||43||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.4|24|1) FN1372-S.SNP.1:9632093 chr01:009632093 0 W/9632093-9632093 FN1372-S Single Base Substitution C-G INTRON HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2562-S.SNP.1:9632093 chr01:009632093 0 W/9632093-9632093 FN2562-S SNP C -> G AC=2;AN=198;BQB=0.991062;DP=4216;DP4=1803,2067,20,43;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.21842e-34;MQSB=0.257281;RPB=0.54892;SGB=206.147;VDB=0.30173;EFF=INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.1|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.2|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.3|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.4|21|1) FN3396-S.SNP.1:9632093 chr01:009632093 0 W/9632093-9632093 FN3396-S SNP C -> G AC=1;AN=184;BQB=0.867858;DP=2563;DP4=1047,1412,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.16133e-06;MQSB=0.996389;RPB=0.885015;SGB=28.7043;VDB=0.91834;EFF=INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.1|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.2|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.3|21|1),INTRON(MODIFIER||||904|LOC_Os01g16870|protein_coding|CODING|LOC_Os01g16870.4|21|1) FN883-S.SNP.1:9632093 chr01:009632093 0 W/9632093-9632093 FN883-S Single Base Substitution C-G INTRON HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3939-S.SNP.1:9639204 chr01:009639204 0 W/9639204-9639204 FN3939-S SNP C -> G AC=1;AN=158;BQB=0.920497;DP=2321;DP4=1216,1017,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.27112e-08;MQSB=0.998816;RPB=0.998094;SGB=51.4366;VDB=0.96784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.1:9644959 chr01:009644959 0 W/9644959-9644959 FN2673-S SNP C -> G AC=1;AN=200;BQB=0.714446;DP=4783;DP4=2807,1693,36,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51285e-27;MQSB=0.934429;RPB=0.999524;SGB=229.261;VDB=0.581953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.1:9652763 chr01:009652763 0 W/9652763-9652763 FN3502-S SNP T -> A AC=1;AN=188;BQB=0.802977;DP=2978;DP4=1429,1469,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.37075e-07;MQSB=0.984233;RPB=0.501793;SGB=20.9896;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.1:9654668 chr01:009654668 0 W/9654668-9654668 FN-342 Single Base Substitution G-A INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4167-S.SNP.1:9655115 chr01:009655115 0 W/9655115-9655115 FN4167-S SNP T -> A AC=1;AN=170;BQB=0.98253;DP=2540;DP4=1201,1264,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.22793e-13;MQSB=0.99819;RPB=0.779282;SGB=83.4133;VDB=0.668428;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.1:9660682 chr01:009660682 0 W/9660682-9660682 FN-192 Single Base Substitution T-A INTRON HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1579-S.SNP.1:9662808 chr01:009662808 0 W/9662808-9662808 FN1579-S Single Base Substitution A-T INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1579-S.SNP.1:9662809 chr01:009662809 0 W/9662809-9662809 FN1579-S Single Base Substitution A-T INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1579-S.SNP.1:9662810 chr01:009662810 0 W/9662810-9662810 FN1579-S Single Base Substitution T-G INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN-259.SNP.1:9664634 chr01:009664634 0 W/9664634-9664634 FN-259 Single Base Substitution A-G INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2774-S.SNP.1:9667207 chr01:009667207 0 W/9667207-9667207 FN2774-S SNP G -> C AC=1;AN=198;BQB=0.24298;DP=4105;DP4=2087,1773,18,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.83243e-21;MQSB=0.915434;RPB=0.611603;SGB=159.832;VDB=0.587726;EFF=INTRON(MODIFIER||||320|LOC_Os01g16900|protein_coding|CODING|LOC_Os01g16900.3|2|1),INTRON(MODIFIER||||362|LOC_Os01g16900|protein_coding|CODING|LOC_Os01g16900.1|2|1),INTRON(MODIFIER||||362|LOC_Os01g16900|protein_coding|CODING|LOC_Os01g16900.2|1|1) FN1318-S.SNP.1:9681007 chr01:009681007 0 W/9681007-9681007 FN1318-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1711-S.SNP.1:9693635 chr01:009693635 0 W/9693635-9693635 FN1711-S SNP C -> T AC=2;AN=188;BQB=0.921567;DP=4005;DP4=1713,2235,24,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=7.53488e-16;MQSB=0.638806;RPB=0.980375;SGB=-98.3201;VDB=0.818865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.1:9698984 chr01:009698984 0 W/9698984-9698984 FN1682-S SNP G -> A AC=2;AN=188;BQB=0.95277;DP=3021;DP4=1307,1634,16,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72971e-18;MQSB=0.996075;RPB=0.886222;SGB=-93.95;VDB=0.36857;EFF=INTRON(MODIFIER||||510|LOC_Os01g16960|protein_coding|CODING|LOC_Os01g16960.1|1|1),INTRON(MODIFIER||||389|LOC_Os01g16960|protein_coding|CODING|LOC_Os01g16960.2|1|1) FN2768-S.SNP.1:9699517 chr01:009699517 0 W/9699517-9699517 FN2768-S SNP C -> T AC=1;AN=198;BQB=0.328471;DP=3582;DP4=1653,1712,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15823e-07;MQSB=0.99767;RPB=0.377181;SGB=29.3637;VDB=0.122277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A30T|510|LOC_Os01g16960|protein_coding|CODING|LOC_Os01g16960.1|1|1),INTRON(MODIFIER||||389|LOC_Os01g16960|protein_coding|CODING|LOC_Os01g16960.2|1|1) FN2500.SNP.1:9706696 chr01:009706696 0 W/9706696-9706696 FN2500 SNP A -> T AC=1;AN=200;BQB=0.861762;DP=4667;DP4=2301,2120,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36152e-10;MQSB=0.956422;RPB=0.930213;SGB=47.4799;VDB=0.331828;EFF=INTRON(MODIFIER||||614|LOC_Os01g16970|protein_coding|CODING|LOC_Os01g16970.1|7|1),INTRON(MODIFIER||||598|LOC_Os01g16970|protein_coding|CODING|LOC_Os01g16970.2|7|1),INTRON(MODIFIER||||582|LOC_Os01g16970|protein_coding|CODING|LOC_Os01g16970.3|6|1) FN769-S.SNP.1:9707213 chr01:009707213 0 W/9707213-9707213 FN769-S Single Base Substitution G-T INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1182-S.SNP.1:9713005 chr01:009713005 0 W/9713005-9713005 FN1182-S Single Base Substitution A-G INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3980-S.SNP.1:9713028 chr01:009713028 0 W/9713028-9713028 FN3980-S SNP G -> A AC=1;AN=168;BQB=0.683689;DP=2413;DP4=1256,1080,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000898825;MQSB=0.950829;RPB=0.26289;SGB=21.0249;VDB=0.0885475;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.1:9715775 chr01:009715775 0 W/9715775-9715775 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2274-S.SNP.1:9716014 chr01:009716014 0 W/9716014-9716014 FN2274-S SNP C -> G AC=1;AN=190;BQB=0.655088;DP=5251;DP4=2757,2091,21,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.36726e-16;MQSB=0.990737;RPB=0.981845;SGB=28.9731;VDB=0.793005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.1:9721536 chr01:009721536 0 W/9721536-9721536 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.00436301;DP=4610;DP4=2345,2203,19,27;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.73701e-15;MQSB=0.999728;RPB=0.807643;SGB=-507.558;VDB=0.916626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.1:9730707 chr01:009730707 0 W/9730707-9730707 FN3506-S SNP C -> A AC=1;AN=188;BQB=0.714;DP=3019;DP4=1593,1350,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.43791e-07;MQSB=0.999379;RPB=0.668817;SGB=32.441;VDB=0.892694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.1:9739250 chr01:009739250 0 W/9739250-9739250 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.994693;DP=4883;DP4=2132,2385,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.94504e-09;MQSB=0.696172;RPB=0.955972;SGB=36.4291;VDB=0.243412;EFF=INTRON(MODIFIER||||1175|LOC_Os01g17010|protein_coding|CODING|LOC_Os01g17010.1|6|1) FN1104-S.SNP.1:9741009 chr01:009741009 0 W/9741009-9741009 FN1104-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g17010 phospholipid-transporting ATPase, putative, expressed SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1366-S.SNP.1:9742406 chr01:009742406 0 W/9742406-9742406 FN1366-S Single Base Substitution T-A INTRON HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN-300.SNP.1:9755647 chr01:009755647 0 W/9755647-9755647 FN-300 Single Base Substitution T-A INTRON HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN1409-S.SNP.1:9757240 chr01:009757240 0 W/9757240-9757240 FN1409-S Single Base Substitution C-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2457.SNP.1:9759087 chr01:009759087 0 W/9759087-9759087 FN2457 SNP T -> C AC=1;AN=200;BQB=0.981738;DP=4525;DP4=2655,1480,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220994;MQB=5.07258e-11;MQSB=2.2964e-06;RPB=0.966604;SGB=91.1059;VDB=0.759281;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.1:9775143 chr01:009775143 0 W/9775143-9775143 FN-344 Single Base Substitution T-C INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN835-S.SNP.1:9780798 chr01:009780798 0 W/9780798-9780798 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN409-S.SNP.1:9782543 chr01:009782543 0 W/9782543-9782543 FN409-S Single Base Substitution T-C INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3413-S.SNP.1:9782928 chr01:009782928 0 W/9782928-9782928 FN3413-S SNP A -> G AC=1;AN=184;BQB=0.935328;DP=2447;DP4=1332,965,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000408664;MQB=3.99167e-06;MQSB=0.999957;RPB=0.965149;SGB=8.14452;VDB=0.534866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.1:9783663 chr01:009783663 0 W/9783663-9783663 FN3662-S SNP T -> C AC=1;AN=190;BQB=0.885385;DP=2715;DP4=1197,1418,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.38491e-07;MQSB=0.969219;RPB=0.291096;SGB=15.9981;VDB=0.176605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.1:9785559 chr01:009785559 0 W/9785559-9785559 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.642452;DP=2514;DP4=1080,1339,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30751e-07;MQSB=0.999954;RPB=0.779696;SGB=57.786;VDB=0.983255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.1:9791097 chr01:009791097 0 W/9791097-9791097 FN2421 SNP A -> T AC=2;AN=200;BQB=0.737818;DP=5218;DP4=2434,2513,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.75082e-20;MQSB=0.918016;RPB=0.778352;SGB=137.158;VDB=0.422126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.1:9791098 chr01:009791098 0 W/9791098-9791098 FN2421 SNP A -> T AC=2;AN=200;BQB=0.932518;DP=5216;DP4=2407,2487,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01329e-20;MQSB=0.981312;RPB=0.812204;SGB=141.763;VDB=0.590011;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.1:9793163 chr01:009793163 0 W/9793163-9793163 FN537-S Single Base Substitution C-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN537-S.SNP.1:9793164 chr01:009793164 0 W/9793164-9793164 FN537-S Single Base Substitution C-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN1412-S.SNP.1:9796394 chr01:009796394 0 W/9796394-9796394 FN1412-S Single Base Substitution G-A INTRON HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-114.SNP.1:9799102 chr01:009799102 0 W/9799102-9799102 FN-114 Single Base Substitution T-C INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3435-S.SNP.1:9799108 chr01:009799108 0 W/9799108-9799108 FN3435-S SNP G -> A AC=2;AN=184;BQB=0.958279;DP=2411;DP4=1219,1102,2,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.33903e-08;MQSB=0.980031;RPB=0.992081;SGB=48.7425;VDB=0.859019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.1:9800211 chr01:009800211 0 W/9800211-9800211 FN-92 Single Base Substitution A-G INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN4103-S.SNP.1:9800536 chr01:009800536 0 W/9800536-9800536 FN4103-S SNP A -> T AC=1;AN=182;BQB=0.84753;DP=2706;DP4=1232,1350,9,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.39685e-07;MQSB=0.998668;RPB=0.140729;SGB=0.617025;VDB=0.114849;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.1:9803957 chr01:009803957 0 W/9803957-9803957 FN-102 Single Base Substitution A-G INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1299-S.SNP.1:9820503 chr01:009820503 0 W/9820503-9820503 FN1299-S Single Base Substitution T-C INTRON HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN906-S.SNP.1:9827456 chr01:009827456 0 W/9827456-9827456 FN906-S Single Base Substitution T-A INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2475.SNP.1:9828118 chr01:009828118 0 W/9828118-9828118 FN2475 SNP T -> A AC=1;AN=200;BQB=0.350937;DP=4919;DP4=2424,2234,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20836e-08;MQSB=0.878758;RPB=0.724856;SGB=63.4749;VDB=0.572958;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.1:9835883 chr01:009835883 0 W/9835883-9835883 FN-108 Single Base Substitution C-T INTRON HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. 707-1.SNP.1:9838064 chr01:009838064 0 W/9838064-9838064 707-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1469, Mutant_ID: 707-1, Generation: M2, Mutations: 41, Genes: 34, Seed availability: Yes. FN1533-S.SNP.1:9838497 chr01:009838497 0 W/9838497-9838497 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN354-S.SNP.1:9840684 chr01:009840684 0 W/9840684-9840684 FN354-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g17120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. W22-2-1.SNP.1:9844699 chr01:009844699 0 W/9844699-9844699 W22-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-122.SNP.1:9853058 chr01:009853058 0 W/9853058-9853058 FN-122 Single Base Substitution G-A INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2719-S.SNP.1:9853058 chr01:009853058 0 W/9853058-9853058 FN2719-S SNP G -> A AC=2;AN=200;BQB=0.63474;DP=4640;DP4=2420,1895,20,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.47297e-22;MQSB=0.907778;RPB=0.733236;SGB=178.604;VDB=0.206623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.1:9853058 chr01:009853058 0 W/9853058-9853058 FN2791-S SNP G -> A AC=2;AN=198;BQB=0.441012;DP=4184;DP4=2184,1749,28,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.59154e-27;MQSB=0.966531;RPB=0.738864;SGB=107.198;VDB=0.325867;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.1:9854004 chr01:009854004 0 W/9854004-9854004 FN-285 Single Base Substitution T-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN4071-S.SNP.1:9856538 chr01:009856538 0 W/9856538-9856538 FN4071-S SNP C -> T AC=1;AN=182;BQB=0.906756;DP=2806;DP4=1265,1428,1,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000228472;MQSB=0.994675;RPB=0.503275;SGB=30.5793;VDB=0.124768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.1:9857319 chr01:009857319 0 W/9857319-9857319 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.888167;DP=4896;DP4=2449,2113,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65538e-07;MQSB=0.99971;RPB=0.829925;SGB=13.8539;VDB=0.0246807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.1:9880508 chr01:009880508 0 W/9880508-9880508 FN1696-S SNP T -> G AC=1;AN=188;BQB=0.734769;DP=3002;DP4=1658,1321,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00117056;MQSB=0.976371;RPB=0.988958;SGB=-3.72151;VDB=0.353276;EFF=INTRON(MODIFIER||||507|LOC_Os01g17180|protein_coding|CODING|LOC_Os01g17180.1|2|1) FN2452.SNP.1:9881903 chr01:009881903 0 W/9881903-9881903 FN2452 SNP T -> C AC=1;AN=200;BQB=0.958831;DP=4835;DP4=2196,2387,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93504e-07;MQSB=0.889631;RPB=0.537881;SGB=45.0543;VDB=0.11747;EFF=INTRON(MODIFIER||||507|LOC_Os01g17180|protein_coding|CODING|LOC_Os01g17180.1|3|1) FN1317-S.SNP.1:9885778 chr01:009885778 0 W/9885778-9885778 FN1317-S Single Base Substitution A-G INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1389-S.SNP.1:9887308 chr01:009887308 0 W/9887308-9887308 FN1389-S Single Base Substitution C-T INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3309-S.SNP.1:9891071 chr01:009891071 0 W/9891071-9891071 FN3309-S SNP C -> A AC=1;AN=184;BQB=0.9999;DP=2587;DP4=1209,1252,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79047e-08;MQSB=0.643303;RPB=0.218359;SGB=23.2751;VDB=0.20159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A370S|497|LOC_Os01g17214|protein_coding|CODING|LOC_Os01g17214.1|12|1) FN3434-S.SNP.1:9893006 chr01:009893006 0 W/9893006-9893006 FN3434-S SNP T -> A AC=2;AN=184;BQB=0.996388;DP=2847;DP4=1588,1149,21,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.78764e-19;MQSB=0.999887;RPB=0.997463;SGB=143.7;VDB=0.517226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E169V|497|LOC_Os01g17214|protein_coding|CODING|LOC_Os01g17214.1|6|1) FN1265-S.SNP.1:9900514 chr01:009900514 0 W/9900514-9900514 FN1265-S Single Base Substitution C-T INTRON HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1402-S.SNP.1:9903164 chr01:009903164 0 W/9903164-9903164 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1029-S.SNP.1:9904929 chr01:009904929 0 W/9904929-9904929 FN1029-S Single Base Substitution G-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-29.SNP.1:9908463 chr01:009908463 0 W/9908463-9908463 FN-29 Single Base Substitution C-T INTERGENIC Homo SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN3547-S.SNP.1:9908599 chr01:009908599 0 W/9908599-9908599 FN3547-S SNP A -> T AC=2;AN=188;BQB=0.888446;DP=3298;DP4=1443,1735,13,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.09869e-12;MQSB=0.78769;RPB=0.860005;SGB=98.9552;VDB=0.138019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.1:9909673 chr01:009909673 0 W/9909673-9909673 FN3562-S SNP C -> T AC=1;AN=188;BQB=0.897681;DP=2980;DP4=1562,1311,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.23872e-15;MQSB=0.996433;RPB=0.345412;SGB=103.498;VDB=0.0134242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.1:9909848 chr01:009909848 0 W/9909848-9909848 FN1473-S Single Base Substitution T-C INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2555-S.SNP.1:9912967 chr01:009912967 0 W/9912967-9912967 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.797057;DP=4068;DP4=1941,1932,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.53477e-06;MQSB=0.8118;RPB=0.854321;SGB=16.3688;VDB=0.320291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.1:9920418 chr01:009920418 0 W/9920418-9920418 FN-407 Single Base Substitution T-C INTRON HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1029-S.SNP.1:9925852 chr01:009925852 0 W/9925852-9925852 FN1029-S Single Base Substitution C-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2096-S.SNP.1:9928046 chr01:009928046 0 W/9928046-9928046 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.870866;DP=3689;DP4=1729,1907,19,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.88991e-17;MQSB=0.909726;RPB=0.988941;SGB=-9.34108;VDB=0.587942;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.1:9934064 chr01:009934064 0 W/9934064-9934064 FN1375-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g17260 transcription factor, putative, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN803-S.SNP.1:9936299 chr01:009936299 0 W/9936299-9936299 FN803-S Single Base Substitution T-C INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1069-S.SNP.1:9947928 chr01:009947928 0 W/9947928-9947928 FN1069-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN520-S.SNP.1:9949579 chr01:009949579 0 W/9949579-9949579 FN520-S Single Base Substitution G-A INTERGENIC HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3842-S.SNP.1:9949853 chr01:009949853 0 W/9949853-9949853 FN3842-S SNP G -> A AC=1;AN=190;BQB=0.902234;DP=3343;DP4=1769,1440,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.69699e-07;MQSB=0.40932;RPB=0.537881;SGB=-15.4375;VDB=0.836865;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.1:9954059 chr01:009954059 0 W/9954059-9954059 FN4160-S SNP G -> A AC=1;AN=170;BQB=0.857525;DP=2730;DP4=1447,1169,12,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.5208e-12;MQSB=0.669148;RPB=0.842159;SGB=58.9766;VDB=0.101045;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.1:9957089 chr01:009957089 0 W/9957089-9957089 FN970-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN3542-S.SNP.1:9965131 chr01:009965131 0 W/9965131-9965131 FN3542-S SNP A -> T AC=1;AN=188;BQB=0.881653;DP=2570;DP4=1366,1146,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.41506e-06;MQSB=0.918562;RPB=0.967057;SGB=44.4357;VDB=0.216862;EFF=INTRON(MODIFIER||||611|LOC_Os01g17320|protein_coding|CODING|LOC_Os01g17320.1|2|1) FN3580-S.SNP.1:9971935 chr01:009971935 0 W/9971935-9971935 FN3580-S SNP C -> T AC=2;AN=188;BQB=0.744024;DP=2604;DP4=1242,1219,15,10;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.41358e-08;MQSB=0.999918;RPB=0.638326;SGB=108.042;VDB=0.021333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.1:9982202 chr01:009982202 0 W/9982202-9982202 FN2475 SNP G -> A AC=1;AN=200;BQB=0.994764;DP=4916;DP4=2362,2288,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26142e-10;MQSB=0.989651;RPB=0.50422;SGB=61.9006;VDB=0.163915;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.1:9989197 chr01:009989197 0 W/9989197-9989197 FN923-S Single Base Substitution C-T INTERGENIC HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2608-S.SNP.1:9990953 chr01:009990953 0 W/9990953-9990953 FN2608-S SNP C -> T AC=2;AN=198;BQB=0.903419;DP=4294;DP4=2052,2036,9,6;HOB=0.019998;ICB=0.495001;MQ=41;MQ0F=0.00605496;MQB=3.92938e-07;MQSB=0.0564617;RPB=0.99999;SGB=43.7442;VDB=0.138575;EFF=INTRON(MODIFIER||||1583|LOC_Os01g17360|protein_coding|CODING|LOC_Os01g17360.1|1|1) FN3815-S.SNP.1:9993712 chr01:009993712 0 W/9993712-9993712 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.991099;DP=3005;DP4=1449,1479,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0382695;MQB=0.33466;MQSB=9.36255e-06;RPB=0.134996;SGB=53.6492;VDB=0.403098;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P836|1583|LOC_Os01g17360|protein_coding|CODING|LOC_Os01g17360.1|6|1) FN863-S.SNP.1:9999549 chr01:009999549 0 W/9999549-9999549 FN863-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g17370 retrotransposon protein, putative, unclassified, expressed SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2530-S.SNP.1:10001963 chr01:010001963 0 W/10001963-10001963 FN2530-S SNP C -> T AC=2;AN=198;BQB=0.613748;DP=4265;DP4=1800,2140,15,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.94891e-16;MQSB=0.00818207;RPB=0.910397;SGB=104.861;VDB=0.575186;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.1:10020327 chr01:010020327 0 W/10020327-10020327 FN765-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g17420 expressed protein SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN570-S.SNP.1:10021558 chr01:010021558 0 W/10021558-10021558 FN570-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN-59.SNP.1:10026306 chr01:010026306 0 W/10026306-10026306 FN-59 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN777-S.SNP.1:10026545 chr01:010026545 0 W/10026545-10026545 FN777-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g17430 coatomer subunit beta-1, putative, expressed SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2546-S.SNP.1:10032051 chr01:010032051 0 W/10032051-10032051 FN2546-S SNP C -> A AC=2;AN=198;BQB=0.551186;DP=3717;DP4=1667,1780,10,10;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0.0223298;MQB=0.0127643;MQSB=0.865708;RPB=0.316139;SGB=61.7198;VDB=0.191835;EFF=INTRON(MODIFIER||||869|LOC_Os01g17450|protein_coding|CODING|LOC_Os01g17450.1|1|1) FN3790-S.SNP.1:10037269 chr01:010037269 0 W/10037269-10037269 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.948908;DP=3551;DP4=1817,1604,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0591383;MQB=0.930685;MQSB=0.161961;RPB=0.778268;SGB=67.3108;VDB=0.550465;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1489|1963|LOC_Os01g17460|protein_coding|CODING|LOC_Os01g17460.1|2|1) FN752-S.SNP.1:10040505 chr01:010040505 0 W/10040505-10040505 FN752-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g17460 retrotransposon protein, putative, unclassified, expressed SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN752-S.SNP.1:10040513 chr01:010040513 0 W/10040513-10040513 FN752-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g17460 retrotransposon protein, putative, unclassified, expressed SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN-348.SNP.1:10042455 chr01:010042455 0 W/10042455-10042455 FN-348 Single Base Substitution A-C INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN3761-S.SNP.1:10048194 chr01:010048194 0 W/10048194-10048194 FN3761-S SNP T -> G AC=1;AN=190;BQB=0.809441;DP=2811;DP4=1450,1222,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.43412e-06;MQSB=0.914289;RPB=0.934626;SGB=35.4339;VDB=0.525142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.1:10051794 chr01:010051794 0 W/10051794-10051794 FN1559-S Single Base Substitution T-C INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3693-S.SNP.1:10054977 chr01:010054977 0 W/10054977-10054977 FN3693-S SNP T -> G AC=2;AN=190;BQB=0.729865;DP=2581;DP4=1411,885,19,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.35814e-09;MQSB=0.702058;RPB=0.773386;SGB=126.511;VDB=0.420151;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.1:10055649 chr01:010055649 0 W/10055649-10055649 FN75-S-43 SNP G -> T AC=1;AN=190;BQB=0.851463;DP=5160;DP4=2460,2133,19,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.18129e-21;MQSB=0.991184;RPB=0.726239;SGB=-137.682;VDB=0.162261;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.1:10056801 chr01:010056801 0 W/10056801-10056801 FN-74 Single Base Substitution G-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3287-S.SNP.1:10058378 chr01:010058378 0 W/10058378-10058378 FN3287-S SNP T -> A AC=1;AN=184;BQB=0.830606;DP=3501;DP4=1414,1860,14,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.40764e-15;MQSB=0.901885;RPB=0.935399;SGB=68.6673;VDB=0.610933;EFF=INTERGENIC(MODIFIER||||||||||1) FN-255.SNP.1:10060995 chr01:010060995 0 W/10060995-10060995 FN-255 Single Base Substitution T-A INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN2316.SNP.1:10074095 chr01:010074095 0 W/10074095-10074095 FN2316 SNP C -> A AC=1;AN=192;BQB=0.0491398;DP=6020;DP4=2935,2703,33,25;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.124585;MQB=0.011545;MQSB=0;RPB=0.468495;SGB=8.93395;VDB=0.932119;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G514*|1407|LOC_Os01g18000|protein_coding|CODING|LOC_Os01g18000.1|3|1) FN2265-S.SNP.1:10077085 chr01:010077085 0 W/10077085-10077085 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.969595;DP=3661;DP4=1633,1734,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0625512;MQB=0.763572;MQSB=1.4013e-45;RPB=0.1512;SGB=99.1879;VDB=0.268605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:10077784 chr01:010077784 0 W/10077784-10077784 FN2498 SNP A -> T AC=1;AN=200;BQB=0.968398;DP=3848;DP4=1638,1613,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.39683e-07;MQSB=0.473871;RPB=0.994098;SGB=-58.3105;VDB=0.493575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.1:10080424 chr01:010080424 0 W/10080424-10080424 FN3709-S SNP T -> C AC=1;AN=190;BQB=0.241925;DP=2345;DP4=1174,1046,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12693e-07;MQSB=0.999435;RPB=0.941577;SGB=28.9929;VDB=0.927044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.1:10080425 chr01:010080425 0 W/10080425-10080425 FN3709-S SNP G -> T AC=1;AN=190;BQB=0.962109;DP=2349;DP4=1191,1091,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19206e-06;MQSB=0.987036;RPB=0.853333;SGB=35.4339;VDB=0.836981;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:10082103 chr01:010082103 0 W/10082103-10082103 FN788-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g18020 retrotransposon protein, putative, unclassified SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2475.SNP.1:10089983 chr01:010089983 0 W/10089983-10089983 FN2475 SNP A -> T AC=1;AN=200;BQB=0.0827595;DP=4532;DP4=1992,2152,14,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41462e-17;MQSB=0.991845;RPB=0.478749;SGB=-4.03268;VDB=0.857433;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.1:10090392 chr01:010090392 0 W/10090392-10090392 FN435-S Single Base Substitution A-G INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1650-S.SNP.1:10092188 chr01:010092188 0 W/10092188-10092188 FN1650-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1075-S.SNP.1:10093467 chr01:010093467 0 W/10093467-10093467 FN1075-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g18040 retrotransposon protein, putative, unclassified, expressed SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN-169.SNP.1:10103281 chr01:010103281 0 W/10103281-10103281 FN-169 Single Base Substitution A-G INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4153-S.SNP.1:10110747 chr01:010110747 0 W/10110747-10110747 FN4153-S SNP A -> G AC=1;AN=170;BQB=0.935663;DP=2064;DP4=982,1001,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.84643e-05;MQSB=0.50613;RPB=0.956167;SGB=38.987;VDB=0.503453;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.1:10124854 chr01:010124854 0 W/10124854-10124854 FN1086-S Single Base Substitution T-A INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN282-S.SNP.1:10125726 chr01:010125726 0 W/10125726-10125726 FN282-S Single Base Substitution A-T INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN-65.SNP.1:10126024 chr01:010126024 0 W/10126024-10126024 FN-65 Single Base Substitution T-C INTERGENIC HOMO SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3793-S.SNP.1:10139349 chr01:010139349 0 W/10139349-10139349 FN3793-S SNP C -> A AC=2;AN=190;BQB=0.208963;DP=2622;DP4=1324,1152,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.5683e-08;MQSB=0.999968;RPB=0.079611;SGB=99.1879;VDB=0.233493;EFF=INTRON(MODIFIER||||350|LOC_Os01g18100|protein_coding|CODING|LOC_Os01g18100.1|1|1) FN999-S.SNP.1:10140006 chr01:010140006 0 W/10140006-10140006 FN999-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g18100 OsRhmbd3 - Putative Rhomboid homologue, expressed SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3432-S.SNP.1:10145040 chr01:010145040 0 W/10145040-10145040 FN3432-S SNP A -> T AC=2;AN=184;BQB=0.833117;DP=2910;DP4=1314,1403,15,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.76552e-17;MQSB=0.82345;RPB=0.948062;SGB=113.227;VDB=0.345945;EFF=INTRON(MODIFIER||||326|LOC_Os01g18110|protein_coding|CODING|LOC_Os01g18110.1|2|1) FN1512-S.SNP.1:10148008 chr01:010148008 0 W/10148008-10148008 FN1512-S Single Base Substitution A-G INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN-379.SNP.1:10149735 chr01:010149735 0 W/10149735-10149735 FN-379 Single Base Substitution T-C INTRON HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1140-S.SNP.1:10152969 chr01:010152969 0 W/10152969-10152969 FN1140-S Single Base Substitution G-T INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-178.SNP.1:10158815 chr01:010158815 0 W/10158815-10158815 FN-178 Single Base Substitution A-G INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3282-S.SNP.1:10166152 chr01:010166152 0 W/10166152-10166152 FN3282-S SNP T -> C AC=1;AN=184;BQB=0.907983;DP=1573;DP4=987,481,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00278774;MQSB=1.08875e-05;RPB=0.904675;SGB=8.14452;VDB=0.00885852;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.1:10169662 chr01:010169662 0 W/10169662-10169662 FN-397 Single Base Substitution G-T INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4230-S.SNP.1:10171590 chr01:010171590 0 W/10171590-10171590 FN4230-S SNP A -> G AC=1;AN=170;BQB=0.873581;DP=2297;DP4=1152,1053,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.60581e-07;MQSB=0.864596;RPB=0.274227;SGB=17.4413;VDB=0.344457;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.1:10175660 chr01:010175660 0 W/10175660-10175660 FN625-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2651-S.SNP.1:10187364 chr01:010187364 0 W/10187364-10187364 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.665911;DP=2122;DP4=1900,99,12,0;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.16752e-08;MQSB=0.392806;RPB=0.424734;SGB=49.6594;VDB=0.148495;EFF=INTRON(MODIFIER||||227|LOC_Os01g18200|protein_coding|CODING|LOC_Os01g18200.1|5|1) FN1762-S.SNP.1:10194879 chr01:010194879 0 W/10194879-10194879 FN1762-S SNP C -> A AC=2;AN=188;BQB=0.0244978;DP=3822;DP4=1969,1809,19,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.11995e-10;MQSB=0.854465;RPB=0.0658689;SGB=51.5091;VDB=0.550581;EFF=INTRON(MODIFIER||||238|LOC_Os01g18210|protein_coding|CODING|LOC_Os01g18210.1|3|1) FN2500.SNP.1:10195131 chr01:010195131 0 W/10195131-10195131 FN2500 SNP G -> A AC=1;AN=200;BQB=0.0843475;DP=4550;DP4=1938,2188,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34117e-08;MQSB=0.992833;RPB=0.989505;SGB=-14.3206;VDB=0.331828;EFF=INTRON(MODIFIER||||238|LOC_Os01g18210|protein_coding|CODING|LOC_Os01g18210.1|4|1) FN3658-S.SNP.1:10195205 chr01:010195205 0 W/10195205-10195205 FN3658-S SNP G -> T AC=2;AN=190;BQB=0.890603;DP=2920;DP4=1418,1395,7,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.61049e-10;MQSB=0.962855;RPB=0.993737;SGB=53.8699;VDB=0.8107;EFF=INTRON(MODIFIER||||238|LOC_Os01g18210|protein_coding|CODING|LOC_Os01g18210.1|4|1) 705-1.SNP.1:10195937 chr01:010195937 0 W/10195937-10195937 705-1 Single Base Substitution A-G INTRON Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.1:10195937 chr01:010195937 0 W/10195937-10195937 705-2 Single Base Substitution A-G INTRON Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-3.SNP.1:10195937 chr01:010195937 0 W/10195937-10195937 705-3 Single Base Substitution A-G INTRON HET SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. 705-7.SNP.1:10195937 chr01:010195937 0 W/10195937-10195937 705-7 Single Base Substitution A-G INTRON Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN500-S.SNP.1:10200643 chr01:010200643 0 W/10200643-10200643 FN500-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3343-S.SNP.1:10208562 chr01:010208562 0 W/10208562-10208562 FN3343-S SNP C -> A AC=1;AN=184;BQB=0.999734;DP=3235;DP4=1594,1545,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.47836e-11;MQSB=0.999465;RPB=0.473226;SGB=75.8731;VDB=0.94886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:10216766 chr01:010216766 0 W/10216766-10216766 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.94767;DP=2451;DP4=1230,1158,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.35703e-06;MQSB=0.853345;RPB=0.242456;SGB=44.2207;VDB=0.902818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:10216982 chr01:010216982 0 W/10216982-10216982 FN2207-S SNP T -> C AC=1;AN=190;BQB=0.915854;DP=4692;DP4=2143,2284,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.06306e-09;MQSB=0.265231;RPB=0.753795;SGB=4.11112;VDB=0.653244;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.1:10220914 chr01:010220914 0 W/10220914-10220914 FN_777-2-1 Single Base Substitution C-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN472-S.SNP.1:10225551 chr01:010225551 0 W/10225551-10225551 FN472-S Single Base Substitution C-T INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-263.SNP.1:10231688 chr01:010231688 0 W/10231688-10231688 FN-263 Single Base Substitution G-C INTERGENIC HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN4183-S.SNP.1:10232914 chr01:010232914 0 W/10232914-10232914 FN4183-S SNP C -> T AC=1;AN=170;BQB=0.999989;DP=2121;DP4=857,1185,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.5092e-05;MQSB=0.99893;RPB=0.514288;SGB=30.1021;VDB=0.0719087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.1:10236102 chr01:010236102 0 W/10236102-10236102 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.401773;DP=1662;DP4=1215,335,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00840645;MQSB=0.408485;RPB=0.305259;SGB=-51.7056;VDB=0.598068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3302-S.SNP.1:10260836 chr01:010260836 0 W/10260836-10260836 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.330919;DP=3124;DP4=1503,1496,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.516e-07;MQSB=0.623508;RPB=0.158397;SGB=6.80232;VDB=0.606363;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.1:10266703 chr01:010266703 0 W/10266703-10266703 FN835-S Single Base Substitution C-T INTRON HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2151-S.SNP.1:10269876 chr01:010269876 0 W/10269876-10269876 FN2151-S SNP G -> T AC=1;AN=168;BQB=0.316148;DP=3965;DP4=1979,1934,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.11739e-16;MQSB=0.999922;RPB=0.958306;SGB=25.6529;VDB=0.085207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.1:10270150 chr01:010270150 0 W/10270150-10270150 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1545-S.SNP.1:10270153 chr01:010270153 0 W/10270153-10270153 FN1545-S Single Base Substitution T-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN4312-S.SNP.1:10277886 chr01:010277886 0 W/10277886-10277886 FN4312-S SNP A -> G AC=2;AN=170;BQB=0.993918;DP=2225;DP4=973,1187,8,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.33972e-10;MQSB=0.893814;RPB=0.583386;SGB=74.528;VDB=0.384573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.1:10313755 chr01:010313755 0 W/10313755-10313755 FN-194 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g18360 OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2626-S.SNP.1:10320778 chr01:010320778 0 W/10320778-10320778 FN2626-S SNP T -> C AC=1;AN=200;BQB=0.404876;DP=3970;DP4=1694,2067,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.3734e-06;MQSB=0.743781;RPB=0.925066;SGB=13.8539;VDB=0.956431;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.1:10321040 chr01:010321040 0 W/10321040-10321040 FN672-S Single Base Substitution C-A INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3899-S.SNP.1:10324414 chr01:010324414 0 W/10324414-10324414 FN3899-S SNP C -> T AC=1;AN=158;BQB=0.920481;DP=2681;DP4=1279,1265,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.1849e-07;MQSB=0.98941;RPB=0.513646;SGB=40.8124;VDB=0.908694;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.1:10327797 chr01:010327797 0 W/10327797-10327797 FN474-S Single Base Substitution A-C INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN3455-S.SNP.1:10331276 chr01:010331276 0 W/10331276-10331276 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.129846;DP=3115;DP4=1967,1075,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.73984e-05;MQSB=0.648962;RPB=0.98308;SGB=20.7533;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.1:10336117 chr01:010336117 0 W/10336117-10336117 FN2549-S SNP A -> T AC=2;AN=198;BQB=0.617086;DP=4205;DP4=1851,2054,10,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.57246e-10;MQSB=0.966035;RPB=0.45651;SGB=50.9344;VDB=0.895616;EFF=INTRON(MODIFIER||||290|LOC_Os01g18390|protein_coding|CODING|LOC_Os01g18390.1|1|1) FN2756-S.SNP.1:10338098 chr01:010338098 0 W/10338098-10338098 FN2756-S SNP T -> A AC=1;AN=200;BQB=0.998677;DP=4627;DP4=2329,2081,13,9;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0626756;MQB=0.468815;MQSB=0;RPB=0.974286;SGB=95.7111;VDB=0.465576;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.1:10344364 chr01:010344364 0 W/10344364-10344364 FN1109-S Single Base Substitution A-C INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3854-S.SNP.1:10347880 chr01:010347880 0 W/10347880-10347880 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.962015;DP=2835;DP4=1715,1006,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.00176367;MQB=0.213848;MQSB=0;RPB=0.75498;SGB=7.23273;VDB=0.992734;EFF=INTRON(MODIFIER||||220|LOC_Os01g18410|protein_coding|CODING|LOC_Os01g18410.1|3|1) FN-118.SNP.1:10353175 chr01:010353175 0 W/10353175-10353175 FN-118 Single Base Substitution G-A INTERGENIC HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-285.SNP.1:10353457 chr01:010353457 0 W/10353457-10353457 FN-285 Single Base Substitution A-G INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-86.SNP.1:10353457 chr01:010353457 0 W/10353457-10353457 FN-86 Single Base Substitution A-G INTERGENIC HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1197-S.SNP.1:10353457 chr01:010353457 0 W/10353457-10353457 FN1197-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2572-S.SNP.1:10353457 chr01:010353457 0 W/10353457-10353457 FN2572-S Single Base Substitution A-G INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN4087-S.SNP.1:10353457 chr01:010353457 0 W/10353457-10353457 FN4087-S SNP A -> G AC=2;AN=182;BQB=0.977938;DP=2845;DP4=1372,1396,4,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.46122e-07;MQSB=0.833247;RPB=0.370726;SGB=44.1115;VDB=0.199623;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.1:10355095 chr01:010355095 0 W/10355095-10355095 FN1071-S Single Base Substitution G-A INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3532-S.SNP.1:10355332 chr01:010355332 0 W/10355332-10355332 FN3532-S SNP A -> T AC=2;AN=188;BQB=0.942731;DP=2406;DP4=1004,1298,10,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.98571e-18;MQSB=0.318263;RPB=0.265309;SGB=-7.93693;VDB=0.0905815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.1:10355340 chr01:010355340 0 W/10355340-10355340 FN3532-S SNP C -> T AC=2;AN=188;BQB=0.917769;DP=2481;DP4=1009,1403,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68488e-15;MQSB=0.294995;RPB=0.184017;SGB=85.5904;VDB=0.160253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.1:10356436 chr01:010356436 0 W/10356436-10356436 FN1048-S Single Base Substitution A-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1071-S.SNP.1:10359036 chr01:010359036 0 W/10359036-10359036 FN1071-S Single Base Substitution C-T INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1434-S.SNP.1:10359493 chr01:010359493 0 W/10359493-10359493 FN1434-S Single Base Substitution G-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2452.SNP.1:10360688 chr01:010360688 0 W/10360688-10360688 FN2452 SNP A -> G AC=1;AN=200;BQB=0.00159358;DP=3835;DP4=1643,1328,7,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71269e-05;MQSB=0.110387;RPB=0.907119;SGB=-324.081;VDB=0.251096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.1:10360688 chr01:010360688 0 W/10360688-10360688 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.336438;DP=4430;DP4=2115,1637,15,30;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15262e-16;MQSB=0.864789;RPB=0.392508;SGB=-641.573;VDB=0.0697686;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.1:10361144 chr01:010361144 0 W/10361144-10361144 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1445-S.SNP.1:10364975 chr01:010364975 0 W/10364975-10364975 FN1445-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1084-S.SNP.1:10367886 chr01:010367886 0 W/10367886-10367886 FN1084-S Single Base Substitution G-T INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN373-S.SNP.1:10374586 chr01:010374586 0 W/10374586-10374586 FN373-S Single Base Substitution G-A INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1082-S.SNP.1:10375580 chr01:010375580 0 W/10375580-10375580 FN1082-S Single Base Substitution G-C INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1076-S.SNP.1:10381556 chr01:010381556 0 W/10381556-10381556 FN1076-S Single Base Substitution C-T INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2797-S.SNP.1:10383884 chr01:010383884 0 W/10383884-10383884 FN2797-S SNP A -> C AC=1;AN=198;BQB=0.93341;DP=3995;DP4=1866,1958,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0838548;MQB=0.87688;MQSB=0;RPB=0.842393;SGB=58.1246;VDB=0.988011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aGt|I799S|1345|LOC_Os01g18470|protein_coding|CODING|LOC_Os01g18470.1|5|1) FN2259-S.SNP.1:10387223 chr01:010387223 0 W/10387223-10387223 FN2259-S SNP G -> T AC=2;AN=190;BQB=0.865147;DP=3017;DP4=1342,1350,11,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000331455;MQB=9.1374e-07;MQSB=0.0335092;RPB=0.729551;SGB=10.3266;VDB=0.185276;EFF=INTRON(MODIFIER||||1345|LOC_Os01g18470|protein_coding|CODING|LOC_Os01g18470.1|1|1) FN2259-S.SNP.1:10387224 chr01:010387224 0 W/10387224-10387224 FN2259-S SNP C -> T AC=2;AN=190;BQB=0.996096;DP=3031;DP4=1338,1346,12,5;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000329924;MQB=1.09377e-07;MQSB=0.0222986;RPB=0.832711;SGB=50.3161;VDB=0.102938;EFF=INTRON(MODIFIER||||1345|LOC_Os01g18470|protein_coding|CODING|LOC_Os01g18470.1|1|1) FN-42.SNP.1:10387331 chr01:010387331 0 W/10387331-10387331 FN-42 Single Base Substitution C-T INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN596-S.SNP.1:10388541 chr01:010388541 0 W/10388541-10388541 FN596-S Single Base Substitution C-T INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN3524-S.SNP.1:10399939 chr01:010399939 0 W/10399939-10399939 FN3524-S SNP G -> A AC=1;AN=188;BQB=0.841904;DP=2727;DP4=1458,1143,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.55558e-09;MQSB=0.997513;RPB=0.450183;SGB=53.5223;VDB=0.109917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.1:10399941 chr01:010399941 0 W/10399941-10399941 FN3524-S SNP T -> A AC=1;AN=188;BQB=0.999889;DP=2703;DP4=1472,1130,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.39868e-09;MQSB=0.984398;RPB=0.53116;SGB=23.5329;VDB=0.119974;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.1:10403381 chr01:010403381 0 W/10403381-10403381 FN-379 Single Base Substitution C-A INTRON HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN4258-S.SNP.1:10403905 chr01:010403905 0 W/10403905-10403905 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.937541;DP=1637;DP4=478,1094,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.54243e-05;MQSB=1.2626e-06;RPB=0.942026;SGB=21.1076;VDB=0.146504;EFF=INTRON(MODIFIER||||80|LOC_Os01g18500|protein_coding|CODING|LOC_Os01g18500.1|2|1) FN742-S.SNP.1:10404725 chr01:010404725 0 W/10404725-10404725 FN742-S Single Base Substitution A-G INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3805-S.SNP.1:10405502 chr01:010405502 0 W/10405502-10405502 FN3805-S SNP T -> A AC=1;AN=190;BQB=0.988183;DP=2088;DP4=1256,710,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00335249;MQB=0.0110941;MQSB=0.125406;RPB=0.500408;SGB=26.3271;VDB=0.672169;EFF=INTRON(MODIFIER||||80|LOC_Os01g18500|protein_coding|CODING|LOC_Os01g18500.1|1|1) FN914-S.SNP.1:10409185 chr01:010409185 0 W/10409185-10409185 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3666-S.SNP.1:10414467 chr01:010414467 0 W/10414467-10414467 FN3666-S SNP C -> T AC=1;AN=190;BQB=0.947257;DP=2780;DP4=1245,1446,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0241007;MQB=0.163634;MQSB=2.46529e-08;RPB=0.99145;SGB=-0.550503;VDB=0.981071;EFF=INTRON(MODIFIER||||587|LOC_Os01g18510|protein_coding|CODING|LOC_Os01g18510.1|1|1) FN2381.SNP.1:10417955 chr01:010417955 0 W/10417955-10417955 FN2381 SNP G -> C AC=1;AN=192;BQB=0.999848;DP=5198;DP4=2825,2171,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.058484;MQB=0.717836;MQSB=5.32094e-07;RPB=0.347461;SGB=-38.813;VDB=0.698618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q721H|1173|LOC_Os01g18520|protein_coding|CODING|LOC_Os01g18520.1|1|1) FN1309-S.SNP.1:10422438 chr01:010422438 0 W/10422438-10422438 FN1309-S Single Base Substitution A-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3421-S.SNP.1:10426977 chr01:010426977 0 W/10426977-10426977 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.654351;DP=3176;DP4=1148,1883,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000147742;MQSB=0.469598;RPB=0.85519;SGB=48.7425;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.1:10428567 chr01:010428567 0 W/10428567-10428567 FN2497 SNP C -> T AC=1;AN=200;BQB=0.812022;DP=5145;DP4=2531,2318,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84275e-09;MQSB=0.996097;RPB=0.988247;SGB=32.0901;VDB=0.851602;EFF=INTERGENIC(MODIFIER||||||||||1) FN998-S.SNP.1:10435962 chr01:010435962 0 W/10435962-10435962 FN998-S Single Base Substitution T-C INTERGENIC HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1213-S.SNP.1:10442044 chr01:010442044 0 W/10442044-10442044 FN1213-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN874-S.SNP.1:10442250 chr01:010442250 0 W/10442250-10442250 FN874-S Single Base Substitution A-G INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN1702-S.SNP.1:10444620 chr01:010444620 0 W/10444620-10444620 FN1702-S SNP G -> C AC=1;AN=188;BQB=0.966568;DP=2364;DP4=1260,1077,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.87034e-05;MQSB=0.991772;RPB=0.522627;SGB=44.4357;VDB=0.0113588;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.1:10454613 chr01:010454613 0 W/10454613-10454613 FN790-S Single Base Substitution G-C INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3380-S.SNP.1:10467084 chr01:010467084 0 W/10467084-10467084 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.999484;DP=2552;DP4=1392,1009,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54264e-07;MQSB=0.911731;RPB=0.982827;SGB=53.2642;VDB=0.236977;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.1:10469805 chr01:010469805 0 W/10469805-10469805 FN2447 SNP G -> A AC=1;AN=200;BQB=0.497081;DP=4849;DP4=2160,2407,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206228;MQB=1.86475e-08;MQSB=0.970925;RPB=0.496093;SGB=36.6644;VDB=0.339188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.1:10476898 chr01:010476898 0 W/10476898-10476898 FN2174-S SNP G -> A AC=1;AN=168;BQB=0.000482651;DP=3376;DP4=1895,1448,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000503981;MQSB=0.954246;RPB=0.661174;SGB=-82.6471;VDB=0.381159;EFF=INTRON(MODIFIER||||603|LOC_Os01g18584|protein_coding|CODING|LOC_Os01g18584.1|5|1) FN1350-S.SNP.1:10485127 chr01:010485127 0 W/10485127-10485127 FN1350-S Single Base Substitution T-C INTERGENIC HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN1536-S.SNP.1:10485928 chr01:010485928 0 W/10485928-10485928 FN1536-S Single Base Substitution G-A INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2499.SNP.1:10485928 chr01:010485928 0 W/10485928-10485928 FN2499 SNP G -> A AC=2;AN=200;BQB=0.993557;DP=5142;DP4=2055,2744,16,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.82292e-27;MQSB=0.686045;RPB=0.144868;SGB=105.035;VDB=0.207905;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.1:10486481 chr01:010486481 0 W/10486481-10486481 FN-370 Single Base Substitution C-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3659-S.SNP.1:10491263 chr01:010491263 0 W/10491263-10491263 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.992207;DP=3435;DP4=1576,1634,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.11465e-13;MQSB=0.78523;RPB=0.972595;SGB=64.5316;VDB=0.825867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.1:10497835 chr01:010497835 0 W/10497835-10497835 FN3981-S SNP C -> G AC=1;AN=168;BQB=0.816358;DP=2369;DP4=1046,1220,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.68556e-12;MQSB=0.987434;RPB=0.117496;SGB=14.2064;VDB=0.336986;EFF=INTRON(MODIFIER||||481|LOC_Os01g18640|protein_coding|CODING|LOC_Os01g18640.2|1|1),INTRON(MODIFIER||||482|LOC_Os01g18640|protein_coding|CODING|LOC_Os01g18640.1|1|1) FN360-S.SNP.1:10501045 chr01:010501045 0 W/10501045-10501045 FN360-S Single Base Substitution T-C INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2121-S.SNP.1:10502532 chr01:010502532 0 W/10502532-10502532 FN2121-S SNP T -> A AC=1;AN=168;BQB=0.0971971;DP=7632;DP4=3764,3812,15,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08804e-13;MQSB=0.987071;RPB=0.984942;SGB=-228.019;VDB=0.988397;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I471L|750|LOC_Os01g18650|protein_coding|CODING|LOC_Os01g18650.1|3|1) FN1553-S.SNP.1:10512649 chr01:010512649 0 W/10512649-10512649 FN1553-S Single Base Substitution C-T INTRON HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2329.SNP.1:10512815 chr01:010512815 0 W/10512815-10512815 FN2329 SNP C -> G AC=1;AN=192;BQB=0.437635;DP=4727;DP4=1988,2201,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000211551;MQB=5.26025e-12;MQSB=0.401554;RPB=0.800169;SGB=-9.12519;VDB=0.328069;EFF=INTRON(MODIFIER||||479|LOC_Os01g18660|protein_coding|CODING|LOC_Os01g18660.1|1|1) FN2575-S.SNP.1:10520045 chr01:010520045 0 W/10520045-10520045 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.806163;DP=3901;DP4=1857,1855,16,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.32055e-21;MQSB=0.989007;RPB=0.981649;SGB=126.432;VDB=0.341743;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L308F|1285|LOC_Os01g18670|protein_coding|CODING|LOC_Os01g18670.1|4|1) FN2373.SNP.1:10520522 chr01:010520522 0 W/10520522-10520522 FN2373 SNP C -> T AC=1;AN=192;BQB=0.445234;DP=4711;DP4=2108,2287,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.68465e-12;MQSB=0.953254;RPB=0.76965;SGB=-10.8182;VDB=0.184235;EFF=SPLICE_SITE_REGION(LOW||||1285|LOC_Os01g18670|protein_coding|CODING|LOC_Os01g18670.1|2|1),INTRON(MODIFIER||||1285|LOC_Os01g18670|protein_coding|CODING|LOC_Os01g18670.1|2|1) FN2373.SNP.1:10520523 chr01:010520523 0 W/10520523-10520523 FN2373 SNP C -> T AC=1;AN=192;BQB=0.172908;DP=4719;DP4=2066,2332,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.54629e-13;MQSB=0.946213;RPB=0.364934;SGB=-39.2487;VDB=0.352626;EFF=SPLICE_SITE_REGION(LOW||||1285|LOC_Os01g18670|protein_coding|CODING|LOC_Os01g18670.1|2|1),INTRON(MODIFIER||||1285|LOC_Os01g18670|protein_coding|CODING|LOC_Os01g18670.1|2|1) FN915-S.SNP.1:10524050 chr01:010524050 0 W/10524050-10524050 FN915-S Single Base Substitution C-A INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN1031-S.SNP.1:10524216 chr01:010524216 0 W/10524216-10524216 FN1031-S Single Base Substitution T-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3627-S.SNP.1:10528311 chr01:010528311 0 W/10528311-10528311 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.613718;DP=3126;DP4=1505,1506,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52051e-05;MQSB=0.394758;RPB=0.909843;SGB=53.6492;VDB=0.0386494;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.1:10531805 chr01:010531805 0 W/10531805-10531805 FN1506-S Single Base Substitution T-G INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3714-S.SNP.1:10532504 chr01:010532504 0 W/10532504-10532504 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.738983;DP=2455;DP4=1193,1196,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.83085e-06;MQSB=0.978077;RPB=0.57509;SGB=44.5415;VDB=0.366229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.1:10535980 chr01:010535980 0 W/10535980-10535980 FN3450-S SNP A -> G AC=1;AN=184;BQB=0.98809;DP=3138;DP4=1601,1440,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.19535e-07;MQSB=0.992265;RPB=0.986821;SGB=25.1826;VDB=0.845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.1:10542248 chr01:010542248 0 W/10542248-10542248 FN1170-S Single Base Substitution T-A INTRON HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2497.SNP.1:10542842 chr01:010542842 0 W/10542842-10542842 FN2497 SNP C -> G AC=1;AN=200;BQB=0.757073;DP=3581;DP4=1699,1602,1,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000279252;MQB=0.000203987;MQSB=0.936257;RPB=0.183008;SGB=22.2439;VDB=0.590673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R275T|589|LOC_Os01g18690|protein_coding|CODING|LOC_Os01g18690.1|2|1) FN1007-S.SNP.1:10543322 chr01:010543322 0 W/10543322-10543322 FN1007-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g18690 retrotransposon protein, putative, unclassified, expressed SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2660-S.SNP.1:10545776 chr01:010545776 0 W/10545776-10545776 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.781667;DP=1824;DP4=1033,724,5,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000548246;MQB=0.000463591;MQSB=0.00798207;RPB=0.834032;SGB=18.639;VDB=0.0445306;EFF=INTRON(MODIFIER||||408|LOC_Os01g18700|protein_coding|CODING|LOC_Os01g18700.1|2|1) FN1561-S.SNP.1:10546350 chr01:010546350 0 W/10546350-10546350 FN1561-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g18700 retrotransposon protein, putative, unclassified, expressed SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2549-S.SNP.1:10559810 chr01:010559810 0 W/10559810-10559810 FN2549-S SNP G -> C AC=1;AN=198;BQB=0.813053;DP=3824;DP4=1730,1857,4,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.84579e-09;MQSB=0.869261;RPB=0.69517;SGB=-12.0504;VDB=0.401718;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.1:10563766 chr01:010563766 0 W/10563766-10563766 FN-228 Single Base Substitution A-G INTRON HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1366-S.SNP.1:10565053 chr01:010565053 0 W/10565053-10565053 FN1366-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g18744 transferase family protein, putative, expressed SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN978-S.SNP.1:10567248 chr01:010567248 0 W/10567248-10567248 FN978-S Single Base Substitution C-T INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1031-S.SNP.1:10567945 chr01:010567945 0 W/10567945-10567945 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4103-S.SNP.1:10568130 chr01:010568130 0 W/10568130-10568130 FN4103-S SNP T -> G AC=1;AN=182;BQB=0.939972;DP=2694;DP4=1350,1263,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.27222e-05;MQSB=0.984689;RPB=0.740268;SGB=30.5793;VDB=0.791433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.1:10569576 chr01:010569576 0 W/10569576-10569576 FN3725-S SNP A -> T AC=1;AN=190;BQB=0.970788;DP=2109;DP4=1277,704,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0322428;MQB=0.227316;MQSB=1.51532e-07;RPB=0.991143;SGB=58.2031;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.1:10579770 chr01:010579770 0 W/10579770-10579770 FN3853-S SNP G -> A AC=2;AN=158;BQB=0.957416;DP=2196;DP4=959,1053,11,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.82854e-11;MQSB=0.835123;RPB=0.833146;SGB=86.3921;VDB=0.274326;EFF=INTRON(MODIFIER||||293|LOC_Os01g18780|protein_coding|CODING|LOC_Os01g18780.1|1|1) FN989-S.SNP.1:10590522 chr01:010590522 0 W/10590522-10590522 FN989-S Single Base Substitution G-T INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN_827-1.SNP.1:10592412 chr01:010592412 0 W/10592412-10592412 FN_827-1 Single Base Substitution C-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1295-S.SNP.1:10600332 chr01:010600332 0 W/10600332-10600332 FN1295-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1295-S.SNP.1:10600337 chr01:010600337 0 W/10600337-10600337 FN1295-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2658-S.SNP.1:10604210 chr01:010604210 0 W/10604210-10604210 FN2658-S SNP T -> C AC=2;AN=200;BQB=0.645259;DP=4979;DP4=2022,2606,21,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.94184e-18;MQSB=0.985845;RPB=0.461634;SGB=112.373;VDB=0.857789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.1:10606277 chr01:010606277 0 W/10606277-10606277 FN1318-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1318-S.SNP.1:10606278 chr01:010606278 0 W/10606278-10606278 FN1318-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN959-S.SNP.1:10609653 chr01:010609653 0 W/10609653-10609653 FN959-S Single Base Substitution A-T INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2453.SNP.1:10617850 chr01:010617850 0 W/10617850-10617850 FN2453 SNP C -> A AC=2;AN=200;BQB=0.999547;DP=4410;DP4=2002,2188,16,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.55749e-24;MQSB=0.894657;RPB=0.73966;SGB=192.42;VDB=0.041601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.1:10618104 chr01:010618104 0 W/10618104-10618104 FN1086-S Single Base Substitution T-G INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1070-S.SNP.1:10627878 chr01:010627878 0 W/10627878-10627878 FN1070-S Single Base Substitution G-A INTERGENIC HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN482-S.SNP.1:10633372 chr01:010633372 0 W/10633372-10633372 FN482-S Single Base Substitution G-C INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN3939-S.SNP.1:10633731 chr01:010633731 0 W/10633731-10633731 FN3939-S SNP G -> C AC=2;AN=158;BQB=0.737938;DP=2293;DP4=1173,1028,14,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.00043611;MQB=6.04152e-09;MQSB=0.42764;RPB=0.893008;SGB=67.7679;VDB=0.652787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.1:10635430 chr01:010635430 0 W/10635430-10635430 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.993916;DP=3226;DP4=1445,1683,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.56262e-10;MQSB=0.9911;RPB=0.962416;SGB=49.835;VDB=0.531583;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.1:10636611 chr01:010636611 0 W/10636611-10636611 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1538-S.SNP.1:10637884 chr01:010637884 0 W/10637884-10637884 FN1538-S Single Base Substitution C-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2691-S.SNP.1:10642982 chr01:010642982 0 W/10642982-10642982 FN2691-S SNP C -> T AC=2;AN=200;BQB=0.879834;DP=4890;DP4=2448,2178,32,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.18314e-32;MQSB=0.444369;RPB=0.361756;SGB=180.871;VDB=0.0769781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.1:10647188 chr01:010647188 0 W/10647188-10647188 FN2544-S SNP A -> G AC=2;AN=198;BQB=0.157506;DP=4145;DP4=2077,1923,15,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000241255;MQB=3.702e-15;MQSB=0.000409502;RPB=0.979554;SGB=146.046;VDB=0.196778;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.1:10647188 chr01:010647188 0 W/10647188-10647188 FN926-S Single Base Substitution A-G INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2544-S.SNP.1:10647189 chr01:010647189 0 W/10647189-10647189 FN2544-S SNP A -> G AC=2;AN=198;BQB=0.713823;DP=4142;DP4=2080,1933,15,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000241429;MQB=3.43916e-17;MQSB=0.000220435;RPB=0.898248;SGB=108.456;VDB=0.289329;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.1:10647189 chr01:010647189 0 W/10647189-10647189 FN926-S Single Base Substitution A-G INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1579-S.SNP.1:10654446 chr01:010654446 0 W/10654446-10654446 FN1579-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g18850 OsSPL1 - SBP-box gene family member, expressed SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1757-S.SNP.1:10658873 chr01:010658873 0 W/10658873-10658873 FN1757-S SNP C -> A AC=1;AN=188;BQB=0.247585;DP=2394;DP4=1461,906,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.34378e-05;MQSB=0.980261;RPB=0.309128;SGB=-16.0863;VDB=0.209247;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E37*|396|LOC_Os01g18860|protein_coding|CODING|LOC_Os01g18860.1|2|1),STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E37*|396|LOC_Os01g18860|protein_coding|CODING|LOC_Os01g18860.2|2|1) FN1031-S.SNP.1:10660038 chr01:010660038 0 W/10660038-10660038 FN1031-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1696-S.SNP.1:10661256 chr01:010661256 0 W/10661256-10661256 FN1696-S SNP G -> A AC=2;AN=188;BQB=0.532485;DP=3192;DP4=1784,1370,13,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72672e-09;MQSB=0.987161;RPB=0.658265;SGB=36.2493;VDB=0.459112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.1:10662578 chr01:010662578 0 W/10662578-10662578 FN3491-S SNP G -> A AC=1;AN=188;BQB=0.940245;DP=2933;DP4=1588,1250,15,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.10207e-11;MQSB=0.993358;RPB=0.988058;SGB=33.7061;VDB=0.863507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.1:10663293 chr01:010663293 0 W/10663293-10663293 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.788841;DP=4767;DP4=2331,2101,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.18726e-13;MQSB=0.232001;RPB=0.999426;SGB=100.316;VDB=0.0611972;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.1:10680901 chr01:010680901 0 W/10680901-10680901 FN631-S Single Base Substitution T-A INTRON HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN4119-S.SNP.1:10681028 chr01:010681028 0 W/10681028-10681028 FN4119-S SNP A -> T AC=1;AN=182;BQB=0.241877;DP=2438;DP4=1021,1357,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00222737;MQSB=0.918842;RPB=0.73796;SGB=18.0739;VDB=0.77747;EFF=INTRON(MODIFIER||||255|LOC_Os01g18890|protein_coding|CODING|LOC_Os01g18890.1|1|1) FN3849-S.SNP.1:10681361 chr01:010681361 0 W/10681361-10681361 FN3849-S SNP G -> T AC=1;AN=158;BQB=0.949587;DP=2303;DP4=1075,1129,6,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.4965e-05;MQSB=0.846719;RPB=0.569653;SGB=17.2267;VDB=0.49048;EFF=INTRON(MODIFIER||||255|LOC_Os01g18890|protein_coding|CODING|LOC_Os01g18890.1|1|1) FN1520-S.SNP.1:10687892 chr01:010687892 0 W/10687892-10687892 FN1520-S Single Base Substitution C-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN-189.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN-189 Single Base Substitution C-T INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1403-S.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN1403-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1610-S.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2187-S.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN2187-S SNP C -> T AC=1;AN=190;BQB=0.757331;DP=3809;DP4=1803,1733,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.79437e-07;MQSB=0.687011;RPB=0.856894;SGB=36.1006;VDB=0.510905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.974492;DP=2855;DP4=1102,1654,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.80021e-06;MQSB=0.674624;RPB=0.983454;SGB=62.6088;VDB=0.827882;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.1:10696927 chr01:010696927 0 W/10696927-10696927 FN994-S Single Base Substitution C-T INTERGENIC HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN916-S.SNP.1:10703660 chr01:010703660 0 W/10703660-10703660 FN916-S Single Base Substitution T-C INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2677-S.SNP.1:10717133 chr01:010717133 0 W/10717133-10717133 FN2677-S SNP G -> A AC=2;AN=200;BQB=0.706971;DP=5001;DP4=2358,2399,25,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.34588e-22;MQSB=0.907619;RPB=0.994001;SGB=123.188;VDB=0.929234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.1:10728133 chr01:010728133 0 W/10728133-10728133 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.849515;DP=3193;DP4=1634,1392,18,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.29369e-15;MQSB=0.231245;RPB=0.231007;SGB=95.6183;VDB=0.549422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.1:10730100 chr01:010730100 0 W/10730100-10730100 FN2627-S SNP T -> C AC=1;AN=200;BQB=0.826909;DP=4485;DP4=2112,2193,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00423634;MQB=1.19573e-07;MQSB=0.666861;RPB=0.531447;SGB=43.8747;VDB=0.075919;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.1:10730299 chr01:010730299 0 W/10730299-10730299 FN701-S Single Base Substitution A-G INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN762-S.SNP.1:10732154 chr01:010732154 0 W/10732154-10732154 FN762-S Single Base Substitution C-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2355.SNP.1:10740563 chr01:010740563 0 W/10740563-10740563 FN2355 SNP G -> A AC=1;AN=192;BQB=0.312131;DP=5470;DP4=2162,2702,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0290676;MQB=0.859604;MQSB=0.206995;RPB=0.49681;SGB=12.0478;VDB=0.673493;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.1:10740578 chr01:010740578 0 W/10740578-10740578 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.99997;DP=3603;DP4=1197,2283,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0288648;MQB=0.000582422;MQSB=0.0500855;RPB=0.98303;SGB=53.5223;VDB=0.71365;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.1:10740579 chr01:010740579 0 W/10740579-10740579 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.998601;DP=3616;DP4=1190,2271,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0293142;MQB=0.000559304;MQSB=0.0391718;RPB=0.991825;SGB=35.9843;VDB=0.293274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1016-S.SNP.1:10741956 chr01:010741956 0 W/10741956-10741956 FN1016-S Single Base Substitution G-T INTRON HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1016-S.SNP.1:10741957 chr01:010741957 0 W/10741957-10741957 FN1016-S Single Base Substitution G-T INTRON HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN3897-S.SNP.1:10743558 chr01:010743558 0 W/10743558-10743558 FN3897-S SNP C -> G AC=2;AN=158;BQB=0.962161;DP=2237;DP4=1061,1054,25,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.09262e-19;MQSB=0.635118;RPB=0.869247;SGB=165.042;VDB=0.708097;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.1:10750571 chr01:010750571 0 W/10750571-10750571 FN1179-S Single Base Substitution C-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1461-S.SNP.1:10764476 chr01:010764476 0 W/10764476-10764476 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-168.SNP.1:10770004 chr01:010770004 0 W/10770004-10770004 FN-168 Single Base Substitution C-T INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1413-S.SNP.1:10779864 chr01:010779864 0 W/10779864-10779864 FN1413-S Single Base Substitution G-C INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN4202-S.SNP.1:10781937 chr01:010781937 0 W/10781937-10781937 FN4202-S SNP G -> A AC=2;AN=170;BQB=0.804642;DP=2386;DP4=1191,1102,29,12;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.0184409;MQB=6.71709e-09;MQSB=9.52931e-09;RPB=0.597395;SGB=171.335;VDB=0.370314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.1:10783051 chr01:010783051 0 W/10783051-10783051 FN3897-S SNP G -> T AC=2;AN=158;BQB=0.867596;DP=1825;DP4=846,816,15,10;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.000547945;MQB=4.81423e-05;MQSB=0.0735918;RPB=0.983426;SGB=103.87;VDB=0.551742;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G44|142|LOC_Os01g19080|protein_coding|CODING|LOC_Os01g19080.1|1|1) FN3759-S.SNP.1:10793145 chr01:010793145 0 W/10793145-10793145 FN3759-S SNP G -> T AC=1;AN=190;BQB=0.828134;DP=4234;DP4=2094,1919,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0635333;MQB=0.887895;MQSB=4.08941e-06;RPB=0.820041;SGB=60.9777;VDB=0.645557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R1297M|1421|LOC_Os01g19100|protein_coding|CODING|LOC_Os01g19100.1|2|1) FN961-S.SNP.1:10799846 chr01:010799846 0 W/10799846-10799846 FN961-S Single Base Substitution C-G INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1496-S.SNP.1:10802739 chr01:010802739 0 W/10802739-10802739 FN1496-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN961-S.SNP.1:10805795 chr01:010805795 0 W/10805795-10805795 FN961-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g19130 protein phosphatase 2C, putative, expressed SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN4112-S.SNP.1:10818591 chr01:010818591 0 W/10818591-10818591 FN4112-S SNP A -> T AC=1;AN=182;BQB=0.952791;DP=2808;DP4=1527,1196,14,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.45561e-09;MQSB=0.538664;RPB=0.897539;SGB=80.1982;VDB=0.638391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.1:10818765 chr01:010818765 0 W/10818765-10818765 FN1438-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2645-S.SNP.1:10818765 chr01:010818765 0 W/10818765-10818765 FN2645-S SNP T -> A AC=1;AN=200;BQB=0.902788;DP=4401;DP4=2377,1825,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19813e-12;MQSB=0.706066;RPB=0.549404;SGB=12.7003;VDB=0.276692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.1:10825312 chr01:010825312 0 W/10825312-10825312 FN1072-S Single Base Substitution A-G INTRON HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN282-S.SNP.1:10826360 chr01:010826360 0 W/10826360-10826360 FN282-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2639-S.SNP.1:10827598 chr01:010827598 0 W/10827598-10827598 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.984382;DP=5227;DP4=2454,2487,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2238e-17;MQSB=0.998888;RPB=0.888704;SGB=63.3521;VDB=0.849538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.1:10835917 chr01:010835917 0 W/10835917-10835917 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.662603;DP=2746;DP4=1082,1268,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.6336e-06;MQSB=0.437177;RPB=0.912656;SGB=32.5467;VDB=0.641244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:10836186 chr01:010836186 0 W/10836186-10836186 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.995343;DP=3071;DP4=1481,1442,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000976881;MQB=6.15697e-05;MQSB=0.9026;RPB=0.79989;SGB=35.7638;VDB=0.588772;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.1:10837317 chr01:010837317 0 W/10837317-10837317 FN495-S Single Base Substitution C-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN2457.SNP.1:10843041 chr01:010843041 0 W/10843041-10843041 FN2457 SNP G -> T AC=1;AN=200;BQB=0.877771;DP=4693;DP4=2279,2139,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.83505e-13;MQSB=0.37104;RPB=0.317216;SGB=69.1109;VDB=0.411986;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.1:10846718 chr01:010846718 0 W/10846718-10846718 FN4147-S SNP T -> G AC=1;AN=170;BQB=0.612915;DP=2380;DP4=1176,1122,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.08947e-07;MQSB=0.985655;RPB=0.368756;SGB=56.7575;VDB=0.939074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.1:10846863 chr01:010846863 0 W/10846863-10846863 FN3867-S SNP A -> T AC=2;AN=158;BQB=0.981833;DP=2688;DP4=1267,1318,9,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.88776e-14;MQSB=0.741263;RPB=0.86816;SGB=49.8826;VDB=0.128979;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:10849895 chr01:010849895 0 W/10849895-10849895 FN788-S Single Base Substitution C-T INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN3910-S.SNP.1:10857197 chr01:010857197 0 W/10857197-10857197 FN3910-S SNP G -> T AC=1;AN=158;BQB=0.890746;DP=3364;DP4=1411,1838,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.200059;MQB=0.999775;MQSB=0.00108339;RPB=0.383373;SGB=47.0672;VDB=0.263711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A1109S|1850|LOC_Os01g19190|protein_coding|CODING|LOC_Os01g19190.1|2|1) FN3910-S.SNP.1:10857198 chr01:010857198 0 W/10857198-10857198 FN3910-S SNP C -> T AC=1;AN=158;BQB=0.999382;DP=3342;DP4=1418,1817,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=27;MQ0F=0.199282;MQB=0.9759;MQSB=0.00185392;RPB=0.25627;SGB=30.704;VDB=0.138584;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1109V|1850|LOC_Os01g19190|protein_coding|CODING|LOC_Os01g19190.1|2|1) FN3578-S.SNP.1:10857724 chr01:010857724 0 W/10857724-10857724 FN3578-S SNP C -> T AC=1;AN=188;BQB=0.604247;DP=5250;DP4=2372,2778,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.219429;MQB=0.983496;MQSB=1.58796e-11;RPB=0.985572;SGB=94.4119;VDB=0.0959141;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1284|1850|LOC_Os01g19190|protein_coding|CODING|LOC_Os01g19190.1|2|1) FN3569-S.SNP.1:10858673 chr01:010858673 0 W/10858673-10858673 FN3569-S SNP G -> A AC=2;AN=188;BQB=0.816218;DP=4198;DP4=1906,2148,31,28;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0121486;MQB=3.93526e-08;MQSB=2.14258e-05;RPB=0.445495;SGB=198.976;VDB=0.0858251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A1601T|1850|LOC_Os01g19190|protein_coding|CODING|LOC_Os01g19190.1|2|1) FN2671-S.SNP.1:10861977 chr01:010861977 0 W/10861977-10861977 FN2671-S SNP A -> G AC=2;AN=200;BQB=0.905301;DP=3972;DP4=1921,1682,21,11;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0312185;MQB=0.939705;MQSB=2.64114e-24;RPB=0.761846;SGB=141.763;VDB=0.0184834;EFF=INTRON(MODIFIER||||1017|LOC_Os01g19200|protein_coding|CODING|LOC_Os01g19200.1|1|1) FN2266-S.SNP.1:10867927 chr01:010867927 0 W/10867927-10867927 FN2266-S SNP A -> T AC=2;AN=190;BQB=0.942868;DP=4567;DP4=2329,1733,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000656886;MQB=1.71681e-10;MQSB=0.469905;RPB=0.423758;SGB=78.7471;VDB=0.366843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.1:10868547 chr01:010868547 0 W/10868547-10868547 FN2174-S SNP T -> C AC=1;AN=168;BQB=0.00914478;DP=3536;DP4=2005,1495,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.59206e-06;MQSB=0.984266;RPB=0.664658;SGB=7.05233;VDB=0.633081;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.1:10869289 chr01:010869289 0 W/10869289-10869289 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN952-S.SNP.1:10869289 chr01:010869289 0 W/10869289-10869289 FN952-S Single Base Substitution C-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2272-S.SNP.1:10876793 chr01:010876793 0 W/10876793-10876793 FN2272-S SNP T -> A AC=1;AN=190;BQB=0.05598;DP=4405;DP4=2238,1956,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.81081e-14;MQSB=0.981899;RPB=0.350742;SGB=126.511;VDB=0.192636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.1:10884101 chr01:010884101 0 W/10884101-10884101 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN967-S.SNP.1:10886943 chr01:010886943 0 W/10886943-10886943 FN967-S Single Base Substitution G-A INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN1718-S.SNP.1:10890932 chr01:010890932 0 W/10890932-10890932 FN1718-S SNP T -> G AC=1;AN=188;BQB=0.20185;DP=2372;DP4=1648,698,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10175e-05;MQSB=0.999249;RPB=0.821544;SGB=-35.9944;VDB=0.420885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.1:10893280 chr01:010893280 0 W/10893280-10893280 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.946656;DP=3352;DP4=1591,1689,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68608e-09;MQSB=0.857484;RPB=0.74681;SGB=75.8731;VDB=0.979597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E441K|527|LOC_Os01g19260|protein_coding|CODING|LOC_Os01g19260.1|2|1) FN-281.SNP.1:10896279 chr01:010896279 0 W/10896279-10896279 FN-281 Single Base Substitution C-T INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4047-S.SNP.1:10896317 chr01:010896317 0 W/10896317-10896317 FN4047-S SNP T -> C AC=2;AN=168;BQB=0.971972;DP=2486;DP4=1079,1308,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.48943e-10;MQSB=0.933549;RPB=0.997724;SGB=69.8961;VDB=0.16204;EFF=INTRON(MODIFIER||||209|LOC_Os01g19270|protein_coding|CODING|LOC_Os01g19270.1|1|1) FN3837-S.SNP.1:10898800 chr01:010898800 0 W/10898800-10898800 FN3837-S SNP T -> C AC=1;AN=190;BQB=0.188676;DP=2539;DP4=1271,1204,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3151e-05;MQSB=0.999292;RPB=0.594309;SGB=-0.550503;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.1:10900049 chr01:010900049 0 W/10900049-10900049 FN4344-S SNP C -> T AC=1;AN=170;BQB=0.852311;DP=2932;DP4=1466,1377,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23631e-08;MQSB=0.850325;RPB=0.99957;SGB=52.3148;VDB=0.910189;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G101D|420|LOC_Os01g19280|protein_coding|CODING|LOC_Os01g19280.1|1|1) FN2533-S.SNP.1:10901815 chr01:010901815 0 W/10901815-10901815 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.000492608;DP=2220;DP4=827,738,6,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00045045;MQB=5.27125e-06;MQSB=0.495022;RPB=0.879878;SGB=-368.936;VDB=0.00246679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:10905318 chr01:010905318 0 W/10905318-10905318 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.957047;DP=4444;DP4=2198,1973,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42458e-13;MQSB=0.995758;RPB=0.907485;SGB=79.9264;VDB=0.799044;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.1:10906637 chr01:010906637 0 W/10906637-10906637 FN4206-S SNP A -> T AC=1;AN=170;BQB=0.582386;DP=2729;DP4=1473,1147,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.74476e-08;MQSB=0.998264;RPB=0.994301;SGB=24.7692;VDB=0.521675;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.1:10911213 chr01:010911213 0 W/10911213-10911213 FN-175 Single Base Substitution C-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-175.SNP.1:10911214 chr01:010911214 0 W/10911214-10911214 FN-175 Single Base Substitution T-C INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2674-S.SNP.1:10916085 chr01:010916085 0 W/10916085-10916085 FN2674-S SNP C -> G AC=1;AN=200;BQB=0.475282;DP=4858;DP4=2461,2151,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.02891e-09;MQSB=0.993178;RPB=0.200111;SGB=47.4799;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.1:10916883 chr01:010916883 0 W/10916883-10916883 FN433-S Single Base Substitution C-T INTERGENIC HOMO SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN1240-S.SNP.1:10918523 chr01:010918523 0 W/10918523-10918523 FN1240-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3535-S.SNP.1:10918931 chr01:010918931 0 W/10918931-10918931 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.909133;DP=2486;DP4=1267,1164,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.000143747;MQSB=0.848978;RPB=0.708171;SGB=18.2682;VDB=0.554573;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.1:10926661 chr01:010926661 0 W/10926661-10926661 FN1150-S Single Base Substitution C-T INTRON HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2123-S.SNP.1:10927559 chr01:010927559 0 W/10927559-10927559 FN2123-S SNP A -> G AC=1;AN=168;BQB=0.324563;DP=1567;DP4=909,603,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.051053;MQB=0.991751;MQSB=8.56155e-36;RPB=0.248016;SGB=8.48315;VDB=0.419497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C162R|442|LOC_Os01g19310|protein_coding|CODING|LOC_Os01g19310.1|2|1) FN-409.SNP.1:10943780 chr01:010943780 0 W/10943780-10943780 FN-409 Single Base Substitution G-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1434-S.SNP.1:10946097 chr01:010946097 0 W/10946097-10946097 FN1434-S Single Base Substitution C-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN229-S.SNP.1:10946304 chr01:010946304 0 W/10946304-10946304 FN229-S Single Base Substitution C-A INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2664-S.SNP.1:10946902 chr01:010946902 0 W/10946902-10946902 FN2664-S SNP T -> A AC=1;AN=200;BQB=0.395673;DP=4701;DP4=2471,2042,21,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.9033e-21;MQSB=0.994731;RPB=0.314673;SGB=73.7728;VDB=0.764408;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.1:10947051 chr01:010947051 0 W/10947051-10947051 FN239-S Single Base Substitution T-C INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN1135-S.SNP.1:10954371 chr01:010954371 0 W/10954371-10954371 FN1135-S Single Base Substitution G-A INTRON HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN-175.SNP.1:10976996 chr01:010976996 0 W/10976996-10976996 FN-175 Single Base Substitution T-C INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2432.SNP.1:10982356 chr01:010982356 0 W/10982356-10982356 FN2432 SNP A -> T AC=1;AN=200;BQB=0.500499;DP=4166;DP4=1743,2133,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41897e-15;MQSB=0.77775;RPB=0.85051;SGB=83.5316;VDB=0.063412;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S125T|175|LOC_Os01g19410|protein_coding|CODING|LOC_Os01g19410.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S125T|177|LOC_Os01g19410|protein_coding|CODING|LOC_Os01g19410.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S125T|240|LOC_Os01g19410|protein_coding|CODING|LOC_Os01g19410.3|2|1) FN-362.SNP.1:10982486 chr01:010982486 0 W/10982486-10982486 FN-362 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g19410 expressed protein SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN-362.SNP.1:10982487 chr01:010982487 0 W/10982487-10982487 FN-362 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g19410 expressed protein SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3839-S.SNP.1:10986154 chr01:010986154 0 W/10986154-10986154 FN3839-S SNP C -> T AC=1;AN=190;BQB=0.865063;DP=3145;DP4=1596,1440,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.45155e-07;MQSB=0.996848;RPB=0.340035;SGB=39.6545;VDB=0.543455;EFF=UTR_3_PRIME(MODIFIER||299||157|LOC_Os01g19420|protein_coding|CODING|LOC_Os01g19420.1|1|1) FN2265-S.SNP.1:10987156 chr01:010987156 0 W/10987156-10987156 FN2265-S SNP G -> A AC=2;AN=190;BQB=0.921425;DP=4204;DP4=2321,1635,23,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.85186e-20;MQSB=0.673188;RPB=0.496212;SGB=124.947;VDB=0.299557;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.1:10990125 chr01:010990125 0 W/10990125-10990125 FN-175 Single Base Substitution C-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1575-S.SNP.1:10992626 chr01:010992626 0 W/10992626-10992626 FN1575-S Single Base Substitution C-T INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN2209-S.SNP.1:10995661 chr01:010995661 0 W/10995661-10995661 FN2209-S SNP A -> G AC=1;AN=190;BQB=0.406117;DP=4773;DP4=2286,1960,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.33996e-14;MQSB=0.290032;RPB=0.548304;SGB=82.301;VDB=0.672367;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.1:11001443 chr01:011001443 0 W/11001443-11001443 FN740-S Single Base Substitution C-T INTRON HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2688-S.SNP.1:11005323 chr01:011005323 0 W/11005323-11005323 FN2688-S SNP T -> C AC=1;AN=200;BQB=0.902519;DP=4587;DP4=2142,2118,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00912e-10;MQSB=0.999323;RPB=0.960313;SGB=-11.8999;VDB=0.171326;EFF=INTRON(MODIFIER||||608|LOC_Os01g19450|protein_coding|CODING|LOC_Os01g19450.1|1|1),INTRON(MODIFIER||||552|LOC_Os01g19450|protein_coding|CODING|LOC_Os01g19450.2|1|1) FN3598-S.SNP.1:11006181 chr01:011006181 0 W/11006181-11006181 FN3598-S SNP G -> T AC=1;AN=188;BQB=0.998788;DP=2155;DP4=1035,1012,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000646568;MQSB=0.949547;RPB=0.92301;SGB=30.8063;VDB=0.811382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.1:11008871 chr01:011008871 0 W/11008871-11008871 FN1451-S Single Base Substitution T-C INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN_N1-116-1.SNP.1:11021002 chr01:011021002 0 W/11021002-11021002 FN_N1-116-1 Single Base Substitution A-G HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2107-S.SNP.1:11022108 chr01:011022108 0 W/11022108-11022108 FN2107-S SNP A -> G AC=2;AN=168;BQB=0.785139;DP=2878;DP4=1412,1385,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.11808e-11;MQSB=0.634191;RPB=0.525538;SGB=56.2162;VDB=0.590766;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.1:11027731 chr01:011027731 0 W/11027731-11027731 FN702-S Single Base Substitution C-A INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN-173.SNP.1:11034589 chr01:011034589 0 W/11034589-11034589 FN-173 Single Base Substitution G-T INTRON HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN669-S.SNP.1:11047376 chr01:011047376 0 W/11047376-11047376 FN669-S Single Base Substitution T-C INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1367-S.SNP.1:11051639 chr01:011051639 0 W/11051639-11051639 FN1367-S Single Base Substitution T-A INTERGENIC Homo SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN4147-S.SNP.1:11052168 chr01:011052168 0 W/11052168-11052168 FN4147-S SNP G -> C AC=1;AN=170;BQB=0.660464;DP=2229;DP4=995,1034,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000448632;MQB=0.000285848;MQSB=0.972528;RPB=0.126263;SGB=31.4354;VDB=0.0242683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.1:11052413 chr01:011052413 0 W/11052413-11052413 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.833365;DP=2814;DP4=1534,1057,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28187e-09;MQSB=0.942026;RPB=0.741387;SGB=49.835;VDB=0.89231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.1:11060249 chr01:011060249 0 W/11060249-11060249 FN3824-S SNP A -> T AC=2;AN=190;BQB=0.900363;DP=2758;DP4=1431,1245,13,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.78104e-12;MQSB=0.882997;RPB=0.833915;SGB=80.9724;VDB=0.250734;EFF=INTRON(MODIFIER||||624|LOC_Os01g19480|protein_coding|CODING|LOC_Os01g19480.1|1|1) FN3951-S.SNP.1:11079631 chr01:011079631 0 W/11079631-11079631 FN3951-S SNP G -> A AC=1;AN=168;BQB=0.857008;DP=2564;DP4=1226,1208,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.88638e-08;MQSB=0.955216;RPB=0.943731;SGB=19.7539;VDB=0.808233;EFF=INTRON(MODIFIER||||484|LOC_Os01g19529|protein_coding|CODING|LOC_Os01g19529.1|1|1) FN912-S.SNP.1:11081058 chr01:011081058 0 W/11081058-11081058 FN912-S Single Base Substitution G-A INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN3659-S.SNP.1:11081936 chr01:011081936 0 W/11081936-11081936 FN3659-S SNP T -> G AC=1;AN=190;BQB=0.893749;DP=2217;DP4=1208,896,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87677e-05;MQSB=0.656676;RPB=0.932223;SGB=5.78296;VDB=0.107308;EFF=INTRON(MODIFIER||||484|LOC_Os01g19529|protein_coding|CODING|LOC_Os01g19529.1|1|1) FN3452-S.SNP.1:11083224 chr01:011083224 0 W/11083224-11083224 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.997051;DP=2839;DP4=1744,1018,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.26335e-07;MQSB=0.619969;RPB=0.977017;SGB=53.2642;VDB=0.848275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A80T|484|LOC_Os01g19529|protein_coding|CODING|LOC_Os01g19529.1|1|1) FN1583-S.SNP.1:11085207 chr01:011085207 0 W/11085207-11085207 FN1583-S Single Base Substitution T-C INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1669-S.SNP.1:11086863 chr01:011086863 0 W/11086863-11086863 FN1669-S SNP C -> A AC=1;AN=188;BQB=0.126225;DP=3926;DP4=2192,1675,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.21802e-10;MQSB=0.989497;RPB=0.664053;SGB=-10.1101;VDB=0.367662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.1:11088201 chr01:011088201 0 W/11088201-11088201 FN1739-S SNP C -> A AC=2;AN=188;BQB=0.786613;DP=3185;DP4=1434,1698,11,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.88682e-14;MQSB=0.983305;RPB=0.998495;SGB=-5.22045;VDB=0.236586;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.1:11090147 chr01:011090147 0 W/11090147-11090147 FN881-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-78.SNP.1:11092265 chr01:011092265 0 W/11092265-11092265 FN-78 Single Base Substitution C-A INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3632-S.SNP.1:11103994 chr01:011103994 0 W/11103994-11103994 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.988704;DP=1619;DP4=562,953,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68015e-05;MQSB=0.909831;RPB=0.100374;SGB=44.5415;VDB=0.100284;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:11107716 chr01:011107716 0 W/11107716-11107716 FN-170 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g19600 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-126.SNP.1:11111937 chr01:011111937 0 W/11111937-11111937 FN-126 Single Base Substitution T-A INTRON HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1686-S.SNP.1:11113743 chr01:011113743 0 W/11113743-11113743 FN1686-S SNP T -> C AC=2;AN=188;BQB=0.174622;DP=2805;DP4=1888,874,26,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.21452e-15;MQSB=0.860809;RPB=0.926476;SGB=-46.0419;VDB=0.398161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.1:11123062 chr01:011123062 0 W/11123062-11123062 FN1675-S SNP T -> C AC=2;AN=188;BQB=0.103873;DP=2590;DP4=936,1564,11,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.04826e-12;MQSB=0.99684;RPB=0.996825;SGB=-77.9263;VDB=0.286405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:11127742 chr01:011127742 0 W/11127742-11127742 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.242737;DP=4589;DP4=2088,2185,7,7;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0193942;MQB=0.622526;MQSB=1.7051e-19;RPB=0.291313;SGB=3.06925;VDB=0.418721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I682T|741|LOC_Os01g19620|protein_coding|CODING|LOC_Os01g19620.1|2|1) FN2279-S.SNP.1:11129884 chr01:011129884 0 W/11129884-11129884 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.756514;DP=4249;DP4=2112,1879,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64302e-12;MQSB=0.292317;RPB=0.996872;SGB=94.6341;VDB=0.0933144;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R67*|150|LOC_Os01g19630|protein_coding|CODING|LOC_Os01g19630.1|1|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R67*|150|LOC_Os01g19630|protein_coding|CODING|LOC_Os01g19630.2|1|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R67*|150|LOC_Os01g19630|protein_coding|CODING|LOC_Os01g19630.3|1|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R67*|150|LOC_Os01g19630|protein_coding|CODING|LOC_Os01g19630.4|1|1) FN997-S.SNP.1:11131619 chr01:011131619 0 W/11131619-11131619 FN997-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN2739-S.SNP.1:11136321 chr01:011136321 0 W/11136321-11136321 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.4657;DP=4599;DP4=2097,2222,28,18;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=4.48157e-18;MQSB=0.218355;RPB=0.507171;SGB=155.635;VDB=0.433697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.1:11141027 chr01:011141027 0 W/11141027-11141027 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.571948;DP=4138;DP4=1713,2127,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.23596e-10;MQSB=0.999429;RPB=0.809158;SGB=47.3393;VDB=0.126824;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.1:11151066 chr01:011151066 0 W/11151066-11151066 FN451-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2682-S.SNP.1:11153921 chr01:011153921 0 W/11153921-11153921 FN2682-S SNP T -> C AC=1;AN=200;BQB=0.547534;DP=4672;DP4=1932,2518,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30212e-08;MQSB=0.938539;RPB=0.400841;SGB=63.4749;VDB=0.156745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.1:11154289 chr01:011154289 0 W/11154289-11154289 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.77343;DP=4095;DP4=1823,1995,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.0002442;MQB=1.08514e-06;MQSB=0.93924;RPB=0.64691;SGB=32.9588;VDB=0.0288132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.1:11155665 chr01:011155665 0 W/11155665-11155665 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.819055;DP=3705;DP4=1642,1917,10,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.18627e-16;MQSB=0.863987;RPB=0.724251;SGB=81.5311;VDB=0.677067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V118A|155|LOC_Os01g19670|protein_coding|CODING|LOC_Os01g19670.1|1|1) FN1109-S.SNP.1:11159769 chr01:011159769 0 W/11159769-11159769 FN1109-S Single Base Substitution C-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4177-S.SNP.1:11162423 chr01:011162423 0 W/11162423-11162423 FN4177-S SNP G -> T AC=1;AN=170;BQB=0.886752;DP=1985;DP4=900,994,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.94594e-05;MQSB=0.933021;RPB=0.267174;SGB=30.1021;VDB=0.212008;EFF=INTRON(MODIFIER||||217|LOC_Os01g19680|protein_coding|CODING|LOC_Os01g19680.1|2|1) FN2594-S.SNP.1:11163052 chr01:011163052 0 W/11163052-11163052 FN2594-S SNP T -> A AC=1;AN=198;BQB=0.949878;DP=4081;DP4=1949,1915,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.83352e-09;MQSB=0.988987;RPB=0.919034;SGB=47.3393;VDB=0.815723;EFF=INTRON(MODIFIER||||217|LOC_Os01g19680|protein_coding|CODING|LOC_Os01g19680.1|2|1) FN2678-S.SNP.1:11167046 chr01:011167046 0 W/11167046-11167046 FN2678-S SNP T -> C AC=1;AN=200;BQB=0.997171;DP=5030;DP4=2470,2284,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77195e-12;MQSB=0.920765;RPB=0.851094;SGB=65.5058;VDB=0.802827;EFF=UTR_5_PRIME(MODIFIER||198||301|LOC_Os01g19694|protein_coding|CODING|LOC_Os01g19694.1|1|1) FN-207.SNP.1:11169599 chr01:011169599 0 W/11169599-11169599 FN-207 Single Base Substitution G-A INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-61.SNP.1:11171882 chr01:011171882 0 W/11171882-11171882 FN-61 Single Base Substitution A-G INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-176.SNP.1:11179628 chr01:011179628 0 W/11179628-11179628 FN-176 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2668-S.SNP.1:11182700 chr01:011182700 0 W/11182700-11182700 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.683281;DP=4864;DP4=2485,2147,16,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00308388;MQB=8.19658e-10;MQSB=0.495005;RPB=0.941229;SGB=141.763;VDB=0.152505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V823M|874|LOC_Os01g19720|protein_coding|CODING|LOC_Os01g19720.1|3|1) FN695-S.SNP.1:11186571 chr01:011186571 0 W/11186571-11186571 FN695-S Single Base Substitution A-T INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2264-S.SNP.1:11191316 chr01:011191316 0 W/11191316-11191316 FN2264-S SNP G -> A AC=2;AN=190;BQB=0.340176;DP=5196;DP4=2535,2291,13,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.09184e-18;MQSB=0.87427;RPB=0.726722;SGB=32.0809;VDB=0.50327;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.1:11193847 chr01:011193847 0 W/11193847-11193847 FN775-S Single Base Substitution G-T INTERGENIC HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-306.SNP.1:11196265 chr01:011196265 0 W/11196265-11196265 FN-306 Single Base Substitution T-G INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-306.SNP.1:11196266 chr01:011196266 0 W/11196266-11196266 FN-306 Single Base Substitution C-T INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1615-S.SNP.1:11221884 chr01:011221884 0 W/11221884-11221884 FN1615-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2152-S.SNP.1:11222885 chr01:011222885 0 W/11222885-11222885 FN2152-S SNP T -> G AC=1;AN=168;BQB=0.0404093;DP=2949;DP4=1188,1723,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0014218;MQSB=0.996068;RPB=0.99115;SGB=-4.39415;VDB=0.456924;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||263|LOC_Os01g19770|protein_coding|CODING|LOC_Os01g19770.1|2|1),INTRON(MODIFIER||||263|LOC_Os01g19770|protein_coding|CODING|LOC_Os01g19770.1|1|1);LOF=(LOC_Os01g19770|LOC_Os01g19770|1|1.00) FN4305-S.SNP.1:11225696 chr01:011225696 0 W/11225696-11225696 FN4305-S SNP G -> A AC=2;AN=170;BQB=0.992124;DP=2596;DP4=1370,1119,18,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.03268e-19;MQSB=0.769037;RPB=0.915472;SGB=27.4149;VDB=0.752559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.1:11227977 chr01:011227977 0 W/11227977-11227977 FN1277-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3639-S.SNP.1:11228310 chr01:011228310 0 W/11228310-11228310 FN3639-S SNP G -> C AC=1;AN=190;BQB=0.778177;DP=2589;DP4=1217,1277,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000182915;MQSB=0.875045;RPB=0.923712;SGB=39.9877;VDB=0.984591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.1:11242848 chr01:011242848 0 W/11242848-11242848 FN-290 Single Base Substitution G-A INTERGENIC HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN373-S.SNP.1:11249199 chr01:011249199 0 W/11249199-11249199 FN373-S Single Base Substitution A-G INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3457-S.SNP.1:11255997 chr01:011255997 0 W/11255997-11255997 FN3457-S SNP A -> G AC=2;AN=184;BQB=0.909199;DP=2397;DP4=1205,1122,9,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.9914e-13;MQSB=0.98244;RPB=0.964338;SGB=89.4385;VDB=0.999626;EFF=INTRON(MODIFIER||||796|LOC_Os01g19850|protein_coding|CODING|LOC_Os01g19850.1|10|1) FN1319-S.SNP.1:11275533 chr01:011275533 0 W/11275533-11275533 FN1319-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g19870 hydrolase, acting on carbon-nitrogen, putative, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2734-S.SNP.1:11278247 chr01:011278247 0 W/11278247-11278247 FN2734-S SNP T -> C AC=1;AN=200;BQB=0.891198;DP=4917;DP4=2524,2169,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1753e-08;MQSB=0.961414;RPB=0.604288;SGB=1.46408;VDB=0.8835;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.1:11281384 chr01:011281384 0 W/11281384-11281384 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.929671;DP=2689;DP4=1143,1479,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98146e-10;MQSB=0.994671;RPB=0.991495;SGB=66.8296;VDB=0.682027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.1:11282513 chr01:011282513 0 W/11282513-11282513 FN2488 SNP C -> A AC=1;AN=200;BQB=0.549398;DP=4254;DP4=1794,2119,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.47217e-07;MQSB=0.743313;RPB=0.145046;SGB=36.6644;VDB=0.433355;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.1:11286513 chr01:011286513 0 W/11286513-11286513 FN755-S Single Base Substitution C-T INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN915-S.SNP.1:11313473 chr01:011313473 0 W/11313473-11313473 FN915-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g19930 retrotransposon protein, putative, unclassified SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3857-S.SNP.1:11314782 chr01:011314782 0 W/11314782-11314782 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.871511;DP=2589;DP4=1126,1375,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.11916e-08;MQSB=0.995568;RPB=0.106407;SGB=55.806;VDB=0.197355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.1:11314916 chr01:011314916 0 W/11314916-11314916 FN1357-S Single Base Substitution C-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2088-S.SNP.1:11316426 chr01:011316426 0 W/11316426-11316426 FN2088-S SNP C -> T AC=1;AN=168;BQB=0.115742;DP=2318;DP4=1066,1209,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.27897e-08;MQSB=0.978538;RPB=0.639659;SGB=8.48315;VDB=0.823599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.1:11325125 chr01:011325125 0 W/11325125-11325125 FN3378-S SNP G -> A AC=1;AN=184;BQB=0.938248;DP=1670;DP4=933,651,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000598802;MQB=1.22337e-06;MQSB=0.00700177;RPB=0.923107;SGB=62.3078;VDB=0.228077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.1:11327349 chr01:011327349 0 W/11327349-11327349 FN1134-S Single Base Substitution G-A INTRON HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN928-S.SNP.1:11331011 chr01:011331011 0 W/11331011-11331011 FN928-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2667-S.SNP.1:11334190 chr01:011334190 0 W/11334190-11334190 FN2667-S SNP G -> C AC=2;AN=200;BQB=0.629904;DP=4984;DP4=2642,2069,34,28;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0176565;MQB=8.30384e-13;MQSB=0.00083443;RPB=0.944716;SGB=80.1174;VDB=0.0509929;EFF=INTRON(MODIFIER||||1096|LOC_Os01g19960|protein_coding|CODING|LOC_Os01g19960.1|11|1) FN2495.SNP.1:11336519 chr01:011336519 0 W/11336519-11336519 FN2495 SNP A -> G AC=2;AN=200;BQB=0.767284;DP=4213;DP4=1883,1874,12,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2009e-13;MQSB=0.9392;RPB=0.372235;SGB=95.7111;VDB=0.870084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.1:11338486 chr01:011338486 0 W/11338486-11338486 FN2242-S SNP C -> G AC=1;AN=190;BQB=0.624526;DP=4561;DP4=2341,1858,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.38871e-10;MQSB=0.686349;RPB=0.891246;SGB=-12.1142;VDB=0.270237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.1:11344916 chr01:011344916 0 W/11344916-11344916 FN1272-S Single Base Substitution G-A INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN4046-S.SNP.1:11348987 chr01:011348987 0 W/11348987-11348987 FN4046-S SNP C -> T AC=1;AN=168;BQB=0.814103;DP=2580;DP4=1382,1032,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0174419;MQB=0.0277081;MQSB=0.906984;RPB=0.999169;SGB=27.8864;VDB=0.825615;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.1:11353995 chr01:011353995 0 W/11353995-11353995 FN230-S Single Base Substitution G-A INTRON HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2638-S.SNP.1:11355365 chr01:011355365 0 W/11355365-11355365 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.925686;DP=4499;DP4=2378,1776,14,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.02051e-11;MQSB=0.699348;RPB=0.527825;SGB=42.5108;VDB=0.29674;EFF=INTRON(MODIFIER||||317|LOC_Os01g19970|protein_coding|CODING|LOC_Os01g19970.1|1|1) FN2638-S.SNP.1:11355368 chr01:011355368 0 W/11355368-11355368 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.402102;DP=4489;DP4=2378,1856,14,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=8.37526e-12;MQSB=0.981853;RPB=0.823182;SGB=42.5108;VDB=0.392992;EFF=INTRON(MODIFIER||||317|LOC_Os01g19970|protein_coding|CODING|LOC_Os01g19970.1|1|1) FN620-S.SNP.1:11359424 chr01:011359424 0 W/11359424-11359424 FN620-S Single Base Substitution G-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN4128-S.SNP.1:11368253 chr01:011368253 0 W/11368253-11368253 FN4128-S SNP C -> G AC=1;AN=182;BQB=0.942693;DP=2462;DP4=868,1473,7,11;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0;MQB=9.72357e-07;MQSB=2.1783e-05;RPB=0.999972;SGB=53.182;VDB=0.244289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.1:11376339 chr01:011376339 0 W/11376339-11376339 FN2683-S SNP T -> C AC=1;AN=200;BQB=0.589428;DP=4938;DP4=2386,2356,12,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=3.18484e-13;MQSB=0.632419;RPB=0.978768;SGB=104.921;VDB=0.481952;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.1:11378199 chr01:011378199 0 W/11378199-11378199 FN760-S Single Base Substitution A-G INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3856-S.SNP.1:11379529 chr01:011379529 0 W/11379529-11379529 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.134134;DP=1754;DP4=685,948,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000582649;MQSB=0.419021;RPB=0.946601;SGB=51.4366;VDB=0.0936153;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A181V|245|LOC_Os01g20030|protein_coding|CODING|LOC_Os01g20030.1|1|1) FN1173-S.SNP.1:11382148 chr01:011382148 0 W/11382148-11382148 FN1173-S Single Base Substitution G-C INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1173-S.SNP.1:11383075 chr01:011383075 0 W/11383075-11383075 FN1173-S Single Base Substitution A-G INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN819-S.SNP.1:11385503 chr01:011385503 0 W/11385503-11385503 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN1061-S.SNP.1:11392575 chr01:011392575 0 W/11392575-11392575 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN725-S.SNP.1:11397015 chr01:011397015 0 W/11397015-11397015 FN725-S Single Base Substitution T-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN1697-S.SNP.1:11401579 chr01:011401579 0 W/11401579-11401579 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.663151;DP=3488;DP4=2149,1300,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0894495;MQB=0.67497;MQSB=0.00613517;RPB=0.680524;SGB=11.7114;VDB=0.395114;EFF=INTERGENIC(MODIFIER||||||||||1) FN783-S.SNP.1:11404388 chr01:011404388 0 W/11404388-11404388 FN783-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g20090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN3807-S.SNP.1:11411305 chr01:011411305 0 W/11411305-11411305 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.671538;DP=2625;DP4=1382,1142,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.0276891;MQSB=0.0190369;RPB=0.65301;SGB=35.4339;VDB=0.74989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.1:11420025 chr01:011420025 0 W/11420025-11420025 FN1466-S Single Base Substitution T-C INTRON Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN488-S.SNP.1:11421333 chr01:011421333 0 W/11421333-11421333 FN488-S Single Base Substitution C-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-408.SNP.1:11422319 chr01:011422319 0 W/11422319-11422319 FN-408 Single Base Substitution C-A INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN2740-S.SNP.1:11424630 chr01:011424630 0 W/11424630-11424630 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.466421;DP=4566;DP4=2502,1924,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.76949e-07;MQSB=0.0493695;RPB=0.992425;SGB=36.6644;VDB=0.820461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.1:11426323 chr01:011426323 0 W/11426323-11426323 FN2107-S SNP A -> G AC=2;AN=168;BQB=0.673976;DP=3860;DP4=1704,2106,6,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.11432e-14;MQSB=0.997661;RPB=0.76738;SGB=79.3486;VDB=0.295414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.1:11435978 chr01:011435978 0 W/11435978-11435978 FN2141-S SNP C -> G AC=1;AN=168;BQB=0.368806;DP=2932;DP4=1027,1862,6,16;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=6.68957e-05;MQSB=0.795755;RPB=0.916062;SGB=39.2004;VDB=0.501903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.1:11436125 chr01:011436125 0 W/11436125-11436125 FN-296 Single Base Substitution G-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN3665-S.SNP.1:11452057 chr01:011452057 0 W/11452057-11452057 FN3665-S SNP C -> G AC=1;AN=190;BQB=0.999841;DP=2819;DP4=1345,1328,20,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.82826e-21;MQSB=0.959435;RPB=0.631534;SGB=128.501;VDB=0.539163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.1:11452618 chr01:011452618 0 W/11452618-11452618 FN1720-S SNP C -> G AC=2;AN=188;BQB=0.390022;DP=3808;DP4=1925,1823,25,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.48701e-18;MQSB=0.990407;RPB=0.999952;SGB=0.212494;VDB=0.393748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.1:11454640 chr01:011454640 0 W/11454640-11454640 FN1179-S Single Base Substitution G-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN984-S.SNP.1:11458261 chr01:011458261 0 W/11458261-11458261 FN984-S Single Base Substitution A-C INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1241-S.SNP.1:11463713 chr01:011463713 0 W/11463713-11463713 FN1241-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN4150-S.SNP.1:11464023 chr01:011464023 0 W/11464023-11464023 FN4150-S SNP A -> G AC=2;AN=170;BQB=0.943858;DP=2332;DP4=1201,980,17,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.88115e-17;MQSB=0.424459;RPB=0.0084831;SGB=114.059;VDB=0.0103008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.1:11465663 chr01:011465663 0 W/11465663-11465663 FN2544-S SNP T -> C AC=2;AN=198;BQB=0.929085;DP=4200;DP4=2145,1812,21,15;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=2.52088e-10;MQSB=8.01398e-06;RPB=0.935695;SGB=78.6516;VDB=0.779603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.1:11487176 chr01:011487176 0 W/11487176-11487176 FN3698-S SNP C -> A AC=1;AN=190;BQB=0.86103;DP=2901;DP4=1352,1433,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00896243;MQB=0.0335142;MQSB=5.72452e-19;RPB=0.597529;SGB=39.6545;VDB=0.433275;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G806|1109|LOC_Os01g20200|protein_coding|CODING|LOC_Os01g20200.1|1|1) FN2685-S.SNP.1:11496653 chr01:011496653 0 W/11496653-11496653 FN2685-S SNP C -> A AC=1;AN=200;BQB=0.525631;DP=1069;DP4=521,443,5,2;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.0852767;MQSB=0.000236508;RPB=0.954155;SGB=26.6347;VDB=0.000908917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.1:11496655 chr01:011496655 0 W/11496655-11496655 FN2685-S SNP G -> A AC=1;AN=200;BQB=0.894507;DP=1000;DP4=482,416,4,2;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.229927;MQSB=0.000190489;RPB=0.785464;SGB=22.0312;VDB=0.00350431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.1:11502980 chr01:011502980 0 W/11502980-11502980 FN3472-S SNP A -> G AC=1;AN=184;BQB=0.748937;DP=2356;DP4=634,1454,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00339559;MQB=2.73309e-08;MQSB=7.80782e-20;RPB=0.853921;SGB=11.3677;VDB=0.244877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.1:11503172 chr01:011503172 0 W/11503172-11503172 FN1011-S Single Base Substitution C-T INTERGENIC HOMO SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3354-S.SNP.1:11503529 chr01:011503529 0 W/11503529-11503529 FN3354-S SNP A -> C AC=1;AN=184;BQB=0.909743;DP=2654;DP4=1288,1243,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.18265e-05;MQSB=0.820101;RPB=0.983321;SGB=28.7043;VDB=0.763155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.1:11507296 chr01:011507296 0 W/11507296-11507296 FN3673-S SNP T -> A AC=1;AN=190;BQB=0.983928;DP=2949;DP4=1430,1408,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08688e-11;MQSB=0.907177;RPB=0.823392;SGB=71.8647;VDB=0.932897;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.1:11507298 chr01:011507298 0 W/11507298-11507298 FN3673-S SNP C -> A AC=1;AN=190;BQB=0.562858;DP=2962;DP4=1448,1296,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00687e-09;MQSB=0.907441;RPB=0.33823;SGB=-12.6681;VDB=0.863278;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.1:11510068 chr01:011510068 0 W/11510068-11510068 FN-93 Single Base Substitution C-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN-333.SNP.1:11510599 chr01:011510599 0 W/11510599-11510599 FN-333 Single Base Substitution C-T INTERGENIC HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN2706-S.SNP.1:11522385 chr01:011522385 0 W/11522385-11522385 FN2706-S SNP T -> A AC=1;AN=200;BQB=0.392584;DP=4693;DP4=2299,2196,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01236e-06;MQSB=0.998767;RPB=0.0325239;SGB=45.0543;VDB=0.277458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.1:11530566 chr01:011530566 0 W/11530566-11530566 FN3670-S SNP A -> G AC=2;AN=190;BQB=0.938689;DP=2967;DP4=1392,1472,16,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.17196e-20;MQSB=0.954797;RPB=0.583755;SGB=144.727;VDB=0.0211282;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.1:11533038 chr01:011533038 0 W/11533038-11533038 FN896-S Single Base Substitution G-T INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN1441-S.SNP.1:11542061 chr01:011542061 0 W/11542061-11542061 FN1441-S Single Base Substitution A-T INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN-85.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN-85 Single Base Substitution C-G INTERGENIC HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1075-S.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN1075-S Single Base Substitution C-G INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2398.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN2398 SNP C -> G AC=2;AN=200;BQB=0.949402;DP=4552;DP4=2230,2036,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000219684;MQB=9.09499e-20;MQSB=0.941995;RPB=0.515033;SGB=41.5933;VDB=0.762315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN3577-S SNP C -> G AC=1;AN=188;BQB=0.983704;DP=3301;DP4=1756,1434,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.12801e-09;MQSB=0.898903;RPB=0.61479;SGB=46.6141;VDB=0.999463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN3899-S SNP C -> G AC=1;AN=158;BQB=0.635995;DP=2710;DP4=1385,1186,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000369004;MQB=2.53709e-07;MQSB=0.975216;RPB=0.771121;SGB=47.5512;VDB=0.92212;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.1:11559019 chr01:011559019 0 W/11559019-11559019 FN589-S Single Base Substitution C-G INTERGENIC HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN745-S.SNP.1:11560176 chr01:011560176 0 W/11560176-11560176 FN745-S Single Base Substitution A-C INTERGENIC HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN-365.SNP.1:11560255 chr01:011560255 0 W/11560255-11560255 FN-365 Single Base Substitution A-C INTERGENIC HOMO SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN3591-S.SNP.1:11574641 chr01:011574641 0 W/11574641-11574641 FN3591-S SNP T -> C AC=2;AN=188;BQB=0.984912;DP=1594;DP4=1292,241,11,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.74681e-08;MQSB=0.240973;RPB=0.995917;SGB=53.5223;VDB=0.717544;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.1:11577317 chr01:011577317 0 W/11577317-11577317 FN-215 Single Base Substitution A-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3677-S.SNP.1:11580429 chr01:011580429 0 W/11580429-11580429 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.667944;DP=3117;DP4=1360,1549,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.56012e-10;MQSB=0.824182;RPB=0.978075;SGB=16.5421;VDB=0.0419669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.1:11588451 chr01:011588451 0 W/11588451-11588451 FN3373-S SNP T -> G AC=1;AN=184;BQB=0.959906;DP=3286;DP4=1668,1474,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81637e-09;MQSB=1.77953e-05;RPB=0.898305;SGB=40.9276;VDB=0.789767;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-3-4-5.SNP.1:11590783 chr01:011590783 0 W/11590783-11590783 FN_398-3-4-5 Single Base Substitution G-A INTERGENIC HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN2401.SNP.1:11598320 chr01:011598320 0 W/11598320-11598320 FN2401 SNP C -> A AC=1;AN=200;BQB=0.909314;DP=3915;DP4=1968,1643,8,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000255428;MQB=3.36299e-07;MQSB=0.968737;RPB=0.116342;SGB=19.0642;VDB=0.00284238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.1:11600886 chr01:011600886 0 W/11600886-11600886 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.823588;DP=3461;DP4=1809,1449,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=8.10226e-06;MQSB=0.00375556;RPB=0.18347;SGB=44.5415;VDB=0.118261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.1:11604185 chr01:011604185 0 W/11604185-11604185 FN3639-S SNP G -> A AC=2;AN=190;BQB=0.58042;DP=1406;DP4=482,837,4,5;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.00477746;MQSB=0.0539567;RPB=0.891886;SGB=21.8853;VDB=0.814374;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.1:11606405 chr01:011606405 0 W/11606405-11606405 FN-403 Single Base Substitution T-A INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN1278-S.SNP.1:11608707 chr01:011608707 0 W/11608707-11608707 FN1278-S Single Base Substitution C-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2554-S.SNP.1:11608995 chr01:011608995 0 W/11608995-11608995 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.926685;DP=4206;DP4=1883,1936,10,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28731e-12;MQSB=0.875762;RPB=0.998386;SGB=104.69;VDB=0.48759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.1:11616312 chr01:011616312 0 W/11616312-11616312 FN2392 SNP C -> A AC=1;AN=200;BQB=0.148124;DP=4378;DP4=1690,2241,8,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000228415;MQB=3.45981e-07;MQSB=4.24546e-12;RPB=0.507702;SGB=69.1109;VDB=0.506378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.1:11616833 chr01:011616833 0 W/11616833-11616833 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.0055226;DP=5067;DP4=2318,2319,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26124e-05;MQSB=0.992878;RPB=0.909807;SGB=-74.0833;VDB=0.999255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.1:11630586 chr01:011630586 0 W/11630586-11630586 FN-103 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g20860 phospholipase D. Active site motif family protein, expressed SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2440.SNP.1:11636794 chr01:011636794 0 W/11636794-11636794 FN2440 SNP G -> C AC=1;AN=200;BQB=0.950065;DP=3951;DP4=2096,1454,11,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19713e-07;MQSB=0.925431;RPB=0.546068;SGB=54.2646;VDB=0.559918;EFF=INTRON(MODIFIER||||991|LOC_Os01g20860|protein_coding|CODING|LOC_Os01g20860.1|1|1) FN3849-S.SNP.1:11640496 chr01:011640496 0 W/11640496-11640496 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.998984;DP=2121;DP4=1006,1007,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.86926e-08;MQSB=0.828711;RPB=0.364967;SGB=26.1881;VDB=0.620184;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.1:11651420 chr01:011651420 0 W/11651420-11651420 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1490-S.SNP.1:11662043 chr01:011662043 0 W/11662043-11662043 FN1490-S Single Base Substitution C-T INTERGENIC Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2334.SNP.1:11662817 chr01:011662817 0 W/11662817-11662817 FN2334 SNP C -> G AC=2;AN=192;BQB=0.457686;DP=4312;DP4=2094,1872,13,10;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=3.81158e-09;MQSB=0.851773;RPB=0.991349;SGB=71.8591;VDB=0.132442;EFF=UTR_5_PRIME(MODIFIER||3256||54|LOC_Os01g20890|protein_coding|CODING|LOC_Os01g20890.1|1|1) FN3757-S.SNP.1:11668675 chr01:011668675 0 W/11668675-11668675 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.959535;DP=2529;DP4=1017,1398,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.84217e-06;MQSB=0.929915;RPB=0.987762;SGB=49.0954;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.1:11671269 chr01:011671269 0 W/11671269-11671269 FN3388-S SNP G -> T AC=1;AN=184;BQB=0.481216;DP=3113;DP4=1627,1345,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.90772e-08;MQSB=0.276016;RPB=0.783097;SGB=-62.1813;VDB=0.469001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.1:11671731 chr01:011671731 0 W/11671731-11671731 FN1314-S Single Base Substitution T-A INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN879-S.SNP.1:11672051 chr01:011672051 0 W/11672051-11672051 FN879-S Single Base Substitution A-T INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN2290.SNP.1:11672561 chr01:011672561 0 W/11672561-11672561 FN2290 SNP G -> A AC=2;AN=192;BQB=0.428903;DP=5424;DP4=2793,2190,46,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.41651e-36;MQSB=0.821043;RPB=0.122461;SGB=177.646;VDB=0.867188;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.1:11675171 chr01:011675171 0 W/11675171-11675171 FN962-S Single Base Substitution T-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1217-S.SNP.1:11678409 chr01:011678409 0 W/11678409-11678409 FN1217-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g20900 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2347.SNP.1:11692231 chr01:011692231 0 W/11692231-11692231 FN2347 SNP A -> T AC=2;AN=192;BQB=0.996882;DP=5265;DP4=2556,2444,31,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000189934;MQB=5.35245e-31;MQSB=0.999732;RPB=0.88192;SGB=128.924;VDB=0.142571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.1:11693945 chr01:011693945 0 W/11693945-11693945 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.960888;DP=3016;DP4=1691,1207,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39797e-09;MQSB=0.880735;RPB=0.340682;SGB=58.2031;VDB=0.0681612;EFF=UTR_5_PRIME(MODIFIER||205||926|LOC_Os01g20940|protein_coding|CODING|LOC_Os01g20940.1|1|1) FN3817-S.SNP.1:11693946 chr01:011693946 0 W/11693946-11693946 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.734403;DP=2990;DP4=1689,1208,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.36455e-10;MQSB=0.90654;RPB=0.474206;SGB=43.2083;VDB=0.0885924;EFF=UTR_5_PRIME(MODIFIER||204||926|LOC_Os01g20940|protein_coding|CODING|LOC_Os01g20940.1|1|1) FN3817-S.SNP.1:11693948 chr01:011693948 0 W/11693948-11693948 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.723529;DP=2986;DP4=1689,1192,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57721e-08;MQSB=0.860796;RPB=0.4949;SGB=39.6545;VDB=0.120429;EFF=UTR_5_PRIME(MODIFIER||202||926|LOC_Os01g20940|protein_coding|CODING|LOC_Os01g20940.1|1|1) FN1136-S.SNP.1:11694035 chr01:011694035 0 W/11694035-11694035 FN1136-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN2489.SNP.1:11702797 chr01:011702797 0 W/11702797-11702797 FN2489 SNP C -> T AC=1;AN=200;BQB=0.0366915;DP=1874;DP4=795,974,4,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00106724;MQB=0.000292658;MQSB=0.047225;RPB=0.953328;SGB=8.64371;VDB=0.18147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.1:11702985 chr01:011702985 0 W/11702985-11702985 FN1725-S SNP C -> T AC=1;AN=188;BQB=0.0613187;DP=1762;DP4=710,943,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.14565e-05;MQSB=0.973422;RPB=0.995645;SGB=3.99491;VDB=0.142842;EFF=INTERGENIC(MODIFIER||||||||||1) FN-338.SNP.1:11706728 chr01:011706728 0 W/11706728-11706728 FN-338 Single Base Substitution A-T INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-175.SNP.1:11708662 chr01:011708662 0 W/11708662-11708662 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1380-S.SNP.1:11711250 chr01:011711250 0 W/11711250-11711250 FN1380-S Single Base Substitution T-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1222-S.SNP.1:11729999 chr01:011729999 0 W/11729999-11729999 FN1222-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g21010 expressed protein SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN-212.SNP.1:11737305 chr01:011737305 0 W/11737305-11737305 FN-212 Single Base Substitution G-A INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3993-S.SNP.1:11737863 chr01:011737863 0 W/11737863-11737863 FN3993-S SNP C -> T AC=1;AN=168;BQB=0.891284;DP=2559;DP4=1254,1195,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.12143e-06;MQSB=0.993758;RPB=0.923816;SGB=38.8805;VDB=0.251186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.1:11744249 chr01:011744249 0 W/11744249-11744249 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.152512;DP=3724;DP4=1781,1912,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.1291e-08;MQSB=0.994541;RPB=0.994338;SGB=39.2004;VDB=0.999682;EFF=INTRON(MODIFIER||||366|LOC_Os01g21034|protein_coding|CODING|LOC_Os01g21034.3|1|1),INTRON(MODIFIER||||426|LOC_Os01g21034|protein_coding|CODING|LOC_Os01g21034.1|1|1) FN2771-S.SNP.1:11750813 chr01:011750813 0 W/11750813-11750813 FN2771-S SNP G -> C AC=1;AN=198;BQB=0.568293;DP=3839;DP4=1993,1674,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.14838e-09;MQSB=0.966067;RPB=0.976176;SGB=26.7492;VDB=0.802788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.1:11751469 chr01:011751469 0 W/11751469-11751469 FN3524-S SNP C -> T AC=1;AN=188;BQB=0.992634;DP=2576;DP4=1205,1312,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.75719e-07;MQSB=0.792186;RPB=0.993791;SGB=25.3545;VDB=0.945331;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.1:11752913 chr01:011752913 0 W/11752913-11752913 FN2675-S SNP C -> T AC=1;AN=200;BQB=0.96634;DP=4919;DP4=2476,2183,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.42869e-13;MQSB=0.788017;RPB=0.84761;SGB=61.9006;VDB=0.232344;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W164*|222|LOC_Os01g21050|protein_coding|CODING|LOC_Os01g21050.1|1|1) FN3363-S.SNP.1:11755789 chr01:011755789 0 W/11755789-11755789 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.987703;DP=3047;DP4=1524,1410,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.68813e-09;MQSB=0.976728;RPB=0.964273;SGB=46.3132;VDB=0.928288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:11756568 chr01:011756568 0 W/11756568-11756568 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.035797;DP=5166;DP4=2325,2495,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52983e-13;MQSB=0.94811;RPB=0.974317;SGB=72.7161;VDB=0.808958;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.1:11759489 chr01:011759489 0 W/11759489-11759489 FN666-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3287-S.SNP.1:11763896 chr01:011763896 0 W/11763896-11763896 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.996399;DP=3587;DP4=1526,1964,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.028436;MQB=0.0833206;MQSB=0.130295;RPB=0.572824;SGB=32.2261;VDB=0.769043;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R178|598|LOC_Os01g21090|protein_coding|CODING|LOC_Os01g21090.1|2|1) FN2440.SNP.1:11764392 chr01:011764392 0 W/11764392-11764392 FN2440 SNP C -> A AC=1;AN=200;BQB=0.861006;DP=2341;DP4=1484,513,12,2;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.140538;MQB=0.385726;MQSB=0.00694167;RPB=0.0417873;SGB=3.06925;VDB=0.111728;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G68|598|LOC_Os01g21090|protein_coding|CODING|LOC_Os01g21090.1|1|1) FN3426-S.SNP.1:11769260 chr01:011769260 0 W/11769260-11769260 FN3426-S SNP G -> C AC=1;AN=184;BQB=0.0456334;DP=2775;DP4=1359,1289,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00036036;MQB=1.45604e-06;MQSB=6.10662e-11;RPB=0.973984;SGB=-16.8012;VDB=0.953859;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.1:11770268 chr01:011770268 0 W/11770268-11770268 FN1313-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN4229-S.SNP.1:11775298 chr01:011775298 0 W/11775298-11775298 FN4229-S SNP G -> A AC=1;AN=170;BQB=0.916003;DP=2293;DP4=1098,1105,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.9017e-06;MQSB=0.587331;RPB=0.394094;SGB=34.5445;VDB=0.787088;EFF=INTERGENIC(MODIFIER||||||||||1) FN-372.SNP.1:11789382 chr01:011789382 0 W/11789382-11789382 FN-372 Single Base Substitution C-T INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN4082-S.SNP.1:11805693 chr01:011805693 0 W/11805693-11805693 FN4082-S SNP G -> T AC=2;AN=182;BQB=0.583402;DP=2602;DP4=1291,1206,21,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.92354e-19;MQSB=0.882891;RPB=0.622449;SGB=174.926;VDB=0.943763;EFF=UTR_3_PRIME(MODIFIER||193||430|LOC_Os01g21160|protein_coding|CODING|LOC_Os01g21160.3|6|1),INTRON(MODIFIER||||523|LOC_Os01g21160|protein_coding|CODING|LOC_Os01g21160.1|6|1),INTRON(MODIFIER||||453|LOC_Os01g21160|protein_coding|CODING|LOC_Os01g21160.2|5|1),INTRON(MODIFIER||||415|LOC_Os01g21160|protein_coding|CODING|LOC_Os01g21160.4|6|1) FN3699-S.SNP.1:11820275 chr01:011820275 0 W/11820275-11820275 FN3699-S SNP G -> A AC=2;AN=190;BQB=0.818045;DP=2704;DP4=1376,1216,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.81379e-13;MQSB=0.935762;RPB=0.7618;SGB=126.511;VDB=0.502689;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C735|1157|LOC_Os01g21190|protein_coding|CODING|LOC_Os01g21190.1|5|1) FN3941-S.SNP.1:11823491 chr01:011823491 0 W/11823491-11823491 FN3941-S SNP T -> A AC=1;AN=168;BQB=0.83611;DP=2429;DP4=1231,1096,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0102923;MQB=7.04493e-07;MQSB=0.0430359;RPB=0.857801;SGB=17.3231;VDB=0.634227;EFF=INTRON(MODIFIER||||1157|LOC_Os01g21190|protein_coding|CODING|LOC_Os01g21190.1|1|1) FN3941-S.SNP.1:11828823 chr01:011828823 0 W/11828823-11828823 FN3941-S SNP A -> C AC=1;AN=168;BQB=0.985175;DP=2270;DP4=1149,1021,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.14378e-09;MQSB=0.673341;RPB=0.968559;SGB=19.7539;VDB=0.663114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.1:11831058 chr01:011831058 0 W/11831058-11831058 FN3520-S SNP C -> T AC=2;AN=188;BQB=0.802364;DP=2958;DP4=1434,1420,19,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.02969e-20;MQSB=0.86417;RPB=0.54257;SGB=180.734;VDB=0.768194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.1:11841874 chr01:011841874 0 W/11841874-11841874 FN4147-S SNP A -> T AC=1;AN=170;BQB=0.891863;DP=2661;DP4=1204,1331,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.31934e-05;MQSB=0.519673;RPB=0.997641;SGB=30.1021;VDB=0.787992;EFF=INTRON(MODIFIER||||145|LOC_Os01g21220|protein_coding|CODING|LOC_Os01g21220.1|2|1) FN3673-S.SNP.1:11842852 chr01:011842852 0 W/11842852-11842852 FN3673-S SNP T -> A AC=1;AN=190;BQB=0.956052;DP=2862;DP4=1309,1448,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00628931;MQB=0.000848234;MQSB=0.936938;RPB=0.708465;SGB=30.8803;VDB=0.566336;EFF=INTRON(MODIFIER||||145|LOC_Os01g21220|protein_coding|CODING|LOC_Os01g21220.1|1|1) FN2360.SNP.1:11847343 chr01:011847343 0 W/11847343-11847343 FN2360 SNP G -> T AC=1;AN=192;BQB=0.0376005;DP=4907;DP4=2399,2223,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.80063e-11;MQSB=0.975825;RPB=0.947891;SGB=-64.5008;VDB=0.628828;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.1:11847481 chr01:011847481 0 W/11847481-11847481 FN427-S Single Base Substitution T-G INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1445-S.SNP.1:11851160 chr01:011851160 0 W/11851160-11851160 FN1445-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3916-S.SNP.1:11855145 chr01:011855145 0 W/11855145-11855145 FN3916-S SNP A -> G AC=1;AN=158;BQB=0.616846;DP=2374;DP4=1098,1163,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.08906e-08;MQSB=0.989762;RPB=0.998978;SGB=44.1818;VDB=0.942794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.1:11870165 chr01:011870165 0 W/11870165-11870165 FN1163-S Single Base Substitution C-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2136-S.SNP.1:11878332 chr01:011878332 0 W/11878332-11878332 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.713306;DP=2747;DP4=1121,1569,8,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.16008e-13;MQSB=0.806481;RPB=0.367427;SGB=19.9297;VDB=0.772168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.1:11894571 chr01:011894571 0 W/11894571-11894571 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.992639;DP=4839;DP4=2479,2121,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28756e-12;MQSB=0.996849;RPB=0.886497;SGB=42.5108;VDB=0.174914;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.1:11900591 chr01:011900591 0 W/11900591-11900591 FN4203-S SNP G -> C AC=2;AN=170;BQB=0.928582;DP=2535;DP4=1193,1241,16,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.19123e-24;MQSB=0.979255;RPB=0.733558;SGB=124.387;VDB=0.520855;EFF=INTRON(MODIFIER||||158|LOC_Os01g21300|protein_coding|CODING|LOC_Os01g21300.1|3|1) FN2794-S.SNP.1:11904514 chr01:011904514 0 W/11904514-11904514 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.567866;DP=4273;DP4=1949,1950,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.70579e-06;MQSB=0.99942;RPB=0.603918;SGB=18.9639;VDB=0.415366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.1:11911810 chr01:011911810 0 W/11911810-11911810 FN2572-S Single Base Substitution T-C INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2765-S.SNP.1:11922588 chr01:011922588 0 W/11922588-11922588 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.362041;DP=3948;DP4=1821,1872,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61563e-11;MQSB=0.928086;RPB=0.847879;SGB=76.1002;VDB=0.764839;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:11927183 chr01:011927183 0 W/11927183-11927183 FN-170 Single Base Substitution G-A INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-142.SNP.1:11929906 chr01:011929906 0 W/11929906-11929906 FN-142 Single Base Substitution G-C INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3039-S.SNP.1:11932646 chr01:011932646 0 W/11932646-11932646 FN3039-S SNP A -> G AC=1;AN=184;BQB=0.707983;DP=2370;DP4=708,1410,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00530372;MQSB=1.68935e-05;RPB=0.701139;SGB=25.1826;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.1:11937438 chr01:011937438 0 W/11937438-11937438 FN4037-S SNP G -> A AC=1;AN=168;BQB=0.953285;DP=2408;DP4=1192,1134,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00373754;MQB=6.81068e-05;MQSB=0.417257;RPB=0.903989;SGB=47.7421;VDB=0.376268;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G16|847|LOC_Os01g21360|protein_coding|CODING|LOC_Os01g21360.1|1|1) FN803-S.SNP.1:11940316 chr01:011940316 0 W/11940316-11940316 FN803-S Single Base Substitution G-A INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN3770-S.SNP.1:11942241 chr01:011942241 0 W/11942241-11942241 FN3770-S SNP G -> A AC=1;AN=190;BQB=0.778519;DP=2568;DP4=1218,1255,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98794e-05;MQSB=0.999741;RPB=0.344292;SGB=44.5415;VDB=0.63143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.1:11945864 chr01:011945864 0 W/11945864-11945864 FN3661-S SNP C -> G AC=1;AN=190;BQB=0.373735;DP=2905;DP4=1762,1007,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.56702e-06;MQSB=0.665184;RPB=0.34477;SGB=23.6597;VDB=0.338855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.1:11949557 chr01:011949557 0 W/11949557-11949557 FN-99 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3105-S.SNP.1:11950963 chr01:011950963 0 W/11950963-11950963 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.945797;DP=3493;DP4=1920,1481,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91563e-07;MQSB=0.963062;RPB=0.700099;SGB=44.2207;VDB=0.652385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.1:11952270 chr01:011952270 0 W/11952270-11952270 FN2347 SNP C -> T AC=2;AN=192;BQB=0.285513;DP=4581;DP4=1988,2096,30,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.64774e-27;MQSB=0.999945;RPB=0.627991;SGB=160.968;VDB=0.0366699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.1:11956977 chr01:011956977 0 W/11956977-11956977 FN3438-S SNP A -> T AC=1;AN=184;BQB=0.897744;DP=2279;DP4=967,1179,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69083e-07;MQSB=0.374165;RPB=0.300836;SGB=44.2207;VDB=0.177966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.1:11956978 chr01:011956978 0 W/11956978-11956978 FN3438-S SNP A -> T AC=1;AN=184;BQB=0.857064;DP=2283;DP4=970,1196,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67697e-07;MQSB=0.362784;RPB=0.257198;SGB=44.2207;VDB=0.188603;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.1:11958830 chr01:011958830 0 W/11958830-11958830 FN1452-S Single Base Substitution G-T INTRON HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3826-S.SNP.1:11980628 chr01:011980628 0 W/11980628-11980628 FN3826-S SNP T -> C AC=1;AN=190;BQB=0.498397;DP=2678;DP4=1197,1395,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73927e-07;MQSB=0.963059;RPB=0.984905;SGB=43.2083;VDB=0.94523;EFF=INTRON(MODIFIER||||690|LOC_Os01g21450|protein_coding|CODING|LOC_Os01g21450.1|4|1),INTRON(MODIFIER||||535|LOC_Os01g21450|protein_coding|CODING|LOC_Os01g21450.2|5|1),INTRON(MODIFIER||||535|LOC_Os01g21450|protein_coding|CODING|LOC_Os01g21450.3|5|1) FN970-S.SNP.1:11985154 chr01:011985154 0 W/11985154-11985154 FN970-S Single Base Substitution G-T INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1405-S.SNP.1:11986787 chr01:011986787 0 W/11986787-11986787 FN1405-S Single Base Substitution C-G INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2781-S.SNP.1:11991041 chr01:011991041 0 W/11991041-11991041 FN2781-S SNP G -> T AC=1;AN=198;BQB=0.99533;DP=4250;DP4=2018,1973,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65088e-16;MQSB=0.901344;RPB=0.915499;SGB=25.3006;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.1:11996101 chr01:011996101 0 W/11996101-11996101 FN1108-S Single Base Substitution G-A INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3823-S.SNP.1:12008205 chr01:012008205 0 W/12008205-12008205 FN3823-S SNP G -> A AC=2;AN=190;BQB=0.362767;DP=1542;DP4=755,703,12,5;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0246433;MQB=0.976778;MQSB=0.00069488;RPB=0.234092;SGB=71.8647;VDB=0.356377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.1:12011981 chr01:012011981 0 W/12011981-12011981 FN1129-S Single Base Substitution G-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1129-S.SNP.1:12011982 chr01:012011982 0 W/12011982-12011982 FN1129-S Single Base Substitution A-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN3801-S.SNP.1:12012931 chr01:012012931 0 W/12012931-12012931 FN3801-S SNP T -> G AC=1;AN=190;BQB=0.975494;DP=2674;DP4=1415,1144,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000435645;MQSB=0.986372;RPB=0.479102;SGB=39.9877;VDB=0.125735;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.1:12013243 chr01:012013243 0 W/12013243-12013243 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.0520219;DP=4147;DP4=2196,1764,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.196769;MQB=0.18078;MQSB=0;RPB=0.976149;SGB=72.5245;VDB=0.489996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.1:12013719 chr01:012013719 0 W/12013719-12013719 FN2668-S SNP A -> G AC=1;AN=200;BQB=0.933527;DP=4496;DP4=2133,2198,16,14;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0373665;MQB=0.0190872;MQSB=1.19346e-18;RPB=0.993775;SGB=63.3521;VDB=0.887511;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.1:12015879 chr01:012015879 0 W/12015879-12015879 W502-3-4 Single Base Substitution C-T INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN3572-S.SNP.1:12016025 chr01:012016025 0 W/12016025-12016025 FN3572-S SNP C -> A AC=1;AN=188;BQB=0.996635;DP=3223;DP4=1527,1623,3,11;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.215017;MQB=0.347082;MQSB=0;RPB=0.951932;SGB=39.5276;VDB=0.180626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.1:12017900 chr01:012017900 0 W/12017900-12017900 FN1205-S Single Base Substitution T-G INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3844-S.SNP.1:12027580 chr01:012027580 0 W/12027580-12027580 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.0440312;DP=2351;DP4=920,1366,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00963159;MQSB=0.319258;RPB=0.979228;SGB=36.1006;VDB=0.644968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.1:12033484 chr01:012033484 0 W/12033484-12033484 FN2142-S SNP G -> C AC=1;AN=168;BQB=0.0012106;DP=3382;DP4=1311,1985,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.47885e-05;MQSB=0.973219;RPB=0.751929;SGB=-166.629;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN3980-S.SNP.1:12033899 chr01:012033899 0 W/12033899-12033899 FN3980-S SNP C -> T AC=1;AN=168;BQB=0.847247;DP=2182;DP4=1094,1014,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32161e-07;MQSB=0.514286;RPB=0.642266;SGB=34.748;VDB=0.939603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.1:12036079 chr01:012036079 0 W/12036079-12036079 FN3473-S SNP A -> T AC=1;AN=184;BQB=0.43133;DP=3546;DP4=1599,1596,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12816e-07;MQSB=0.983388;RPB=0.575968;SGB=-38.1432;VDB=0.679729;EFF=INTRON(MODIFIER||||995|LOC_Os01g21530|protein_coding|CODING|LOC_Os01g21530.1|1|1) FN4099-S.SNP.1:12036761 chr01:012036761 0 W/12036761-12036761 FN4099-S SNP C -> T AC=1;AN=182;BQB=0.938244;DP=2208;DP4=1273,808,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.000866466;MQSB=1.83974e-12;RPB=0.622662;SGB=30.5793;VDB=0.00425545;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A75|995|LOC_Os01g21530|protein_coding|CODING|LOC_Os01g21530.1|2|1) FN2667-S.SNP.1:12040921 chr01:012040921 0 W/12040921-12040921 FN2667-S SNP T -> C AC=2;AN=200;BQB=0.0516767;DP=4969;DP4=2145,2407,18,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00362246;MQB=4.40735e-12;MQSB=1.93439e-16;RPB=0.993919;SGB=123.188;VDB=0.110345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1501-S.SNP.1:12045444 chr01:012045444 0 W/12045444-12045444 FN1501-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g21536 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2561-S.SNP.1:12050891 chr01:012050891 0 W/12050891-12050891 FN2561-S SNP G -> A AC=1;AN=198;BQB=0.26609;DP=4526;DP4=1763,2537,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.028502;MQB=0.029027;MQSB=0.00067828;RPB=0.824342;SGB=29.3637;VDB=0.59927;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.1:12053282 chr01:012053282 0 W/12053282-12053282 FN4095-S SNP G -> A AC=2;AN=182;BQB=0.997824;DP=2963;DP4=1518,1374,14,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.76093e-12;MQSB=0.999795;RPB=0.269029;SGB=63.7146;VDB=0.844562;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.1:12054737 chr01:012054737 0 W/12054737-12054737 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.957617;DP=2661;DP4=1330,1270,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06384e-06;MQSB=0.905421;RPB=0.990013;SGB=25.3545;VDB=0.150505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.1:12056529 chr01:012056529 0 W/12056529-12056529 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.0594833;DP=4517;DP4=2267,1943,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000221386;MQB=3.87476e-05;MQSB=0.818367;RPB=0.998545;SGB=28.7675;VDB=0.928624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.1:12057558 chr01:012057558 0 W/12057558-12057558 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.561311;DP=2493;DP4=1209,1187,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000541397;MQSB=0.691964;RPB=0.826216;SGB=44.5415;VDB=0.376838;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L94|148|LOC_Os01g21550|protein_coding|CODING|LOC_Os01g21550.1|1|1) FN1464-S.SNP.1:12057855 chr01:012057855 0 W/12057855-12057855 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3457-S.SNP.1:12058812 chr01:012058812 0 W/12058812-12058812 FN3457-S SNP G -> A AC=2;AN=184;BQB=0.877302;DP=2673;DP4=1391,1187,6,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000374111;MQB=1.64364e-09;MQSB=0.88124;RPB=0.919072;SGB=49.835;VDB=0.560992;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.1:12064157 chr01:012064157 0 W/12064157-12064157 FN4072-S SNP T -> A AC=1;AN=182;BQB=0.915077;DP=2780;DP4=1266,1410,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03411e-08;MQSB=0.992402;RPB=0.716239;SGB=53.1331;VDB=0.97005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.1:12065891 chr01:012065891 0 W/12065891-12065891 FN1042-S Single Base Substitution C-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2657-S.SNP.1:12075898 chr01:012075898 0 W/12075898-12075898 FN2657-S SNP A -> T AC=1;AN=200;BQB=0.37085;DP=4234;DP4=1997,2033,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08784e-15;MQSB=0.897852;RPB=0.92155;SGB=118.737;VDB=0.737957;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.1:12081194 chr01:012081194 0 W/12081194-12081194 FN-143 Single Base Substitution G-T INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN977-S.SNP.1:12081194 chr01:012081194 0 W/12081194-12081194 FN977-S Single Base Substitution G-T INTERGENIC HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1731-S.SNP.1:12083133 chr01:012083133 0 W/12083133-12083133 FN1731-S SNP T -> C AC=2;AN=188;BQB=0.542687;DP=2720;DP4=1725,918,23,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.09891e-13;MQSB=0.675707;RPB=0.87905;SGB=-44.2151;VDB=0.53387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.1:12096594 chr01:012096594 0 W/12096594-12096594 FN2349 SNP T -> G AC=1;AN=192;BQB=0.568306;DP=1141;DP4=16,1068,1,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000559318;MQSB=0.934238;RPB=0.921471;SGB=21.8272;VDB=0.0974253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.1:12098997 chr01:012098997 0 W/12098997-12098997 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.13381;DP=2416;DP4=1458,773,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0517384;MQB=0.897278;MQSB=4.35676e-11;RPB=0.897197;SGB=3.4556;VDB=0.99278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R3W|1026|LOC_Os01g21600|protein_coding|CODING|LOC_Os01g21600.1|1|1) FN4099-S.SNP.1:12098997 chr01:012098997 0 W/12098997-12098997 FN4099-S SNP C -> T AC=2;AN=182;BQB=0.998869;DP=3023;DP4=1805,966,15,11;HOB=0.0217365;ICB=0.494567;MQ=37;MQ0F=0.0628515;MQB=0.432178;MQSB=0.00848331;RPB=0.646741;SGB=50.7635;VDB=0.608629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R3W|1026|LOC_Os01g21600|protein_coding|CODING|LOC_Os01g21600.1|1|1) FN527-S.SNP.1:12098997 chr01:012098997 0 W/12098997-12098997 FN527-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g21600 retrotransposon protein, putative, unclassified, expressed SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1023-S.SNP.1:12099515 chr01:012099515 0 W/12099515-12099515 FN1023-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g21600 retrotransposon protein, putative, unclassified, expressed SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3592-S.SNP.1:12099536 chr01:012099536 0 W/12099536-12099536 FN3592-S SNP C -> G AC=1;AN=188;BQB=0.497046;DP=4334;DP4=1888,2341,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.87022e-14;MQSB=0.836271;RPB=0.837087;SGB=98.9552;VDB=0.435347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A152G|1026|LOC_Os01g21600|protein_coding|CODING|LOC_Os01g21600.1|2|1) FN1376-S.SNP.1:12102003 chr01:012102003 0 W/12102003-12102003 FN1376-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN4089-S.SNP.1:12105452 chr01:012105452 0 W/12105452-12105452 FN4089-S SNP C -> T AC=1;AN=182;BQB=0.850582;DP=3120;DP4=1461,1576,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.9176e-07;MQSB=0.79825;RPB=0.107816;SGB=35.6277;VDB=0.0299595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.1:12109638 chr01:012109638 0 W/12109638-12109638 FN1476-S Single Base Substitution C-G INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN953-S.SNP.1:12111074 chr01:012111074 0 W/12111074-12111074 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2553-S.SNP.1:12111614 chr01:012111614 0 W/12111614-12111614 FN2553-S SNP T -> A AC=1;AN=198;BQB=0.644093;DP=4478;DP4=2091,2192,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.33833e-07;MQSB=0.95768;RPB=0.972527;SGB=49.5489;VDB=0.171414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.1:12117807 chr01:012117807 0 W/12117807-12117807 FN2340 SNP C -> G AC=1;AN=192;BQB=0.609141;DP=4483;DP4=2317,1737,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.97641e-09;MQSB=0.600527;RPB=0.130743;SGB=-37.9417;VDB=0.329522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A28G|418|LOC_Os01g21630|protein_coding|CODING|LOC_Os01g21630.1|1|1) FN2130-S.SNP.1:12121145 chr01:012121145 0 W/12121145-12121145 FN2130-S SNP T -> A AC=2;AN=168;BQB=0.584874;DP=2802;DP4=1559,1170,17,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.60545e-11;MQSB=0.797561;RPB=0.777838;SGB=-11.926;VDB=0.0700344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W147R|418|LOC_Os01g21630|protein_coding|CODING|LOC_Os01g21630.1|3|1) FN2370.SNP.1:12122413 chr01:012122413 0 W/12122413-12122413 FN2370 SNP G -> T AC=2;AN=192;BQB=0.196604;DP=4519;DP4=2114,2128,16,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.38257e-16;MQSB=0.848314;RPB=0.959406;SGB=27.6913;VDB=0.991291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C367F|418|LOC_Os01g21630|protein_coding|CODING|LOC_Os01g21630.1|8|1) FN785-S.SNP.1:12129345 chr01:012129345 0 W/12129345-12129345 FN785-S Single Base Substitution G-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1076-S.SNP.1:12130833 chr01:012130833 0 W/12130833-12130833 FN1076-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g21650 plant protein of unknown function domain containing protein, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3496-S.SNP.1:12141946 chr01:012141946 0 W/12141946-12141946 FN3496-S SNP A -> T AC=2;AN=188;BQB=0.997194;DP=1725;DP4=1239,436,8,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.14214e-06;MQSB=0.986728;RPB=0.797323;SGB=39.8925;VDB=0.795755;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.1:12143477 chr01:012143477 0 W/12143477-12143477 FN862-S Single Base Substitution A-G INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2324.SNP.1:12150396 chr01:012150396 0 W/12150396-12150396 FN2324 SNP G -> A AC=1;AN=192;BQB=0.091424;DP=4348;DP4=2024,2113,7,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.92594e-08;MQSB=0.999711;RPB=0.962121;SGB=15.1765;VDB=0.496307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.1:12152801 chr01:012152801 0 W/12152801-12152801 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.0103853;DP=4160;DP4=2144,1783,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.74516e-07;MQSB=0.992223;RPB=0.993096;SGB=-33.8063;VDB=0.996646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.1:12155393 chr01:012155393 0 W/12155393-12155393 FN3541-S SNP C -> A AC=1;AN=188;BQB=0.322551;DP=2526;DP4=1282,1195,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000756756;MQSB=0.608404;RPB=0.999003;SGB=21.8113;VDB=0.544569;EFF=INTRON(MODIFIER||||99|LOC_Os01g21660|protein_coding|CODING|LOC_Os01g21660.1|2|1) FN2588-S.SNP.1:12159399 chr01:012159399 0 W/12159399-12159399 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.993383;DP=4259;DP4=1926,2136,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234797;MQB=3.73712e-07;MQSB=0.996991;RPB=0.840458;SGB=1.37381;VDB=0.624468;EFF=INTRON(MODIFIER||||445|LOC_Os01g21670|protein_coding|CODING|LOC_Os01g21670.1|1|1) FN778-S.SNP.1:12165144 chr01:012165144 0 W/12165144-12165144 FN778-S Single Base Substitution T-C INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2340.SNP.1:12165812 chr01:012165812 0 W/12165812-12165812 FN2340 SNP T -> C AC=1;AN=192;BQB=0.954956;DP=4471;DP4=2064,1968,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000223664;MQB=2.51542e-09;MQSB=0.969848;RPB=0.480619;SGB=12.0478;VDB=0.357922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.1:12173648 chr01:012173648 0 W/12173648-12173648 FN1368-S Single Base Substitution T-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4204-S.SNP.1:12173648 chr01:012173648 0 W/12173648-12173648 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.835695;DP=2106;DP4=1138,885,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.56755e-06;MQSB=0.987013;RPB=0.651776;SGB=41.7633;VDB=0.438313;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.1:12179166 chr01:012179166 0 W/12179166-12179166 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.348764;DP=3145;DP4=1630,1475,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.88806e-07;MQSB=0.169061;RPB=0.989584;SGB=29.4772;VDB=0.108449;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.1:12183854 chr01:012183854 0 W/12183854-12183854 FN550-S Single Base Substitution G-T INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1557-S.SNP.1:12186943 chr01:012186943 0 W/12186943-12186943 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1287-S.SNP.1:12189269 chr01:012189269 0 W/12189269-12189269 FN1287-S Single Base Substitution G-A INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1080-S.SNP.1:12194057 chr01:012194057 0 W/12194057-12194057 FN1080-S Single Base Substitution A-G INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN805-S.SNP.1:12198546 chr01:012198546 0 W/12198546-12198546 FN805-S Single Base Substitution T-A INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN805-S.SNP.1:12198547 chr01:012198547 0 W/12198547-12198547 FN805-S Single Base Substitution T-A INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2289.SNP.1:12201496 chr01:012201496 0 W/12201496-12201496 FN2289 SNP G -> A AC=1;AN=192;BQB=0.817184;DP=5167;DP4=2309,2523,14,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42187e-17;MQSB=0.954809;RPB=0.879068;SGB=-81.7287;VDB=0.779653;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.1:12204962 chr01:012204962 0 W/12204962-12204962 FN_N1-119-1 Single Base Substitution A-G Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2596-S.SNP.1:12213379 chr01:012213379 0 W/12213379-12213379 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.559593;DP=4260;DP4=2038,1960,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.7638e-07;MQSB=0.987861;RPB=0.845687;SGB=-16.8114;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.1:12214672 chr01:012214672 0 W/12214672-12214672 FN3997-S SNP A -> G AC=1;AN=168;BQB=0.867383;DP=2247;DP4=972,1140,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.63392e-11;MQSB=0.494844;RPB=0.157863;SGB=74.3269;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.1:12215457 chr01:012215457 0 W/12215457-12215457 FN409-S Single Base Substitution A-G INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN436-S.SNP.1:12222797 chr01:012222797 0 W/12222797-12222797 FN436-S Single Base Substitution A-T INTRON HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2751-S.SNP.1:12225219 chr01:012225219 0 W/12225219-12225219 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.985752;DP=4998;DP4=2221,2474,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.70222e-10;MQSB=0.956024;RPB=0.740126;SGB=11.0951;VDB=0.921589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M19I|50|LOC_Os01g21790|protein_coding|CODING|LOC_Os01g21790.1|2|1) FN1475-S.SNP.1:12230617 chr01:012230617 0 W/12230617-12230617 FN1475-S Single Base Substitution G-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1721-S.SNP.1:12238006 chr01:012238006 0 W/12238006-12238006 FN1721-S SNP T -> C AC=2;AN=188;BQB=0.0412346;DP=3908;DP4=1784,2059,22,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.64288e-20;MQSB=0.944932;RPB=0.161189;SGB=-49.6956;VDB=0.417944;EFF=INTRON(MODIFIER||||1015|LOC_Os01g21820|protein_coding|CODING|LOC_Os01g21820.1|14|1) FN464-S.SNP.1:12239142 chr01:012239142 0 W/12239142-12239142 FN464-S Single Base Substitution C-T INTRON HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN-92.SNP.1:12242074 chr01:012242074 0 W/12242074-12242074 FN-92 Single Base Substitution G-C INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1527-S.SNP.1:12243692 chr01:012243692 0 W/12243692-12243692 FN1527-S Single Base Substitution T-A INTRON Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1527-S.SNP.1:12243709 chr01:012243709 0 W/12243709-12243709 FN1527-S Single Base Substitution T-A SPLICE_SITE_REGION Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1304-S.SNP.1:12245106 chr01:012245106 0 W/12245106-12245106 FN1304-S Single Base Substitution A-G INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN4125-S.SNP.1:12246076 chr01:012246076 0 W/12246076-12246076 FN4125-S SNP T -> A AC=2;AN=182;BQB=0.994878;DP=3201;DP4=1558,1534,13,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.13745e-16;MQSB=0.95847;RPB=0.878541;SGB=125.307;VDB=0.752486;EFF=INTRON(MODIFIER||||1015|LOC_Os01g21820|protein_coding|CODING|LOC_Os01g21820.1|2|1) FN1646-S.SNP.1:12257844 chr01:012257844 0 W/12257844-12257844 FN1646-S Single Base Substitution G-A INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN3509-S.SNP.1:12257844 chr01:012257844 0 W/12257844-12257844 FN3509-S SNP G -> A AC=2;AN=188;BQB=0.957468;DP=2264;DP4=1143,965,11,4;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0291519;MQB=0.243582;MQSB=0;RPB=0.395223;SGB=62.6088;VDB=0.771924;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.1:12257844 chr01:012257844 0 W/12257844-12257844 FN402-S Single Base Substitution G-A INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN4138-S.SNP.1:12257844 chr01:012257844 0 W/12257844-12257844 FN4138-S SNP G -> A AC=2;AN=170;BQB=0.976522;DP=1787;DP4=1068,612,11,5;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0358142;MQB=0.173696;MQSB=0;RPB=0.716655;SGB=24.7692;VDB=0.838306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.1:12259660 chr01:012259660 0 W/12259660-12259660 FN3673-S SNP G -> A AC=1;AN=190;BQB=0.485631;DP=2887;DP4=1329,1431,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23038e-05;MQSB=0.988447;RPB=0.16065;SGB=36.1006;VDB=0.570086;EFF=INTRON(MODIFIER||||865|LOC_Os01g21850|protein_coding|CODING|LOC_Os01g21850.1|2|1),INTRON(MODIFIER||||809|LOC_Os01g21850|protein_coding|CODING|LOC_Os01g21850.2|2|1) FN3354-S.SNP.1:12268117 chr01:012268117 0 W/12268117-12268117 FN3354-S SNP C -> G AC=1;AN=184;BQB=0.838133;DP=3132;DP4=1598,1417,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48626e-07;MQSB=0.860996;RPB=0.479652;SGB=56.8786;VDB=0.975579;EFF=INTRON(MODIFIER||||210|LOC_Os01g21860|protein_coding|CODING|LOC_Os01g21860.1|4|1) FN2683-S.SNP.1:12268379 chr01:012268379 0 W/12268379-12268379 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.981997;DP=4966;DP4=2041,2598,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.26949e-07;MQSB=0.964693;RPB=0.978634;SGB=33.0593;VDB=0.421758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A117V|210|LOC_Os01g21860|protein_coding|CODING|LOC_Os01g21860.1|6|1) FN1228-S.SNP.1:12269615 chr01:012269615 0 W/12269615-12269615 FN1228-S Single Base Substitution T-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2261-S.SNP.1:12270135 chr01:012270135 0 W/12270135-12270135 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.155676;DP=3896;DP4=1784,1669,26,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000256674;MQB=1.45386e-17;MQSB=0.872581;RPB=0.575662;SGB=142.717;VDB=0.0870875;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q90*|121|LOC_Os01g21870|protein_coding|CODING|LOC_Os01g21870.1|1|1) FN3700-S.SNP.1:12272391 chr01:012272391 0 W/12272391-12272391 FN3700-S SNP C -> T AC=1;AN=190;BQB=0.690473;DP=2897;DP4=1363,1391,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44812e-08;MQSB=0.999997;RPB=0.996847;SGB=76.4186;VDB=0.495717;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.1:12275472 chr01:012275472 0 W/12275472-12275472 FN714-S Single Base Substitution A-C INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN302-S.SNP.1:12275622 chr01:012275622 0 W/12275622-12275622 FN302-S Single Base Substitution A-G INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN3656-S.SNP.1:12276062 chr01:012276062 0 W/12276062-12276062 FN3656-S SNP G -> A AC=1;AN=190;BQB=0.708202;DP=3011;DP4=1279,1572,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.0043175;MQB=3.04262e-18;MQSB=0.551851;RPB=0.812923;SGB=-343.169;VDB=0.90685;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.1:12282912 chr01:012282912 0 W/12282912-12282912 FN898-S Single Base Substitution A-G INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2359.SNP.1:12290902 chr01:012290902 0 W/12290902-12290902 FN2359 SNP G -> A AC=2;AN=192;BQB=0.953672;DP=4235;DP4=1928,1983,6,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.74488e-12;MQSB=0.516937;RPB=0.429893;SGB=78.9878;VDB=0.641508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.1:12306453 chr01:012306453 0 W/12306453-12306453 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.460627;DP=5093;DP4=2317,2492,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.34144e-10;MQSB=0.800644;RPB=0.957249;SGB=8.77275;VDB=0.377752;EFF=INTRON(MODIFIER||||517|LOC_Os01g21940|protein_coding|CODING|LOC_Os01g21940.1|7|1) FN840-S.SNP.1:12308579 chr01:012308579 0 W/12308579-12308579 FN840-S Single Base Substitution T-C INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN698-S.SNP.1:12317371 chr01:012317371 0 W/12317371-12317371 FN698-S Single Base Substitution G-T INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN391-S.SNP.1:12324754 chr01:012324754 0 W/12324754-12324754 FN391-S Single Base Substitution T-C INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3571-S.SNP.1:12327415 chr01:012327415 0 W/12327415-12327415 FN3571-S SNP G -> A AC=2;AN=188;BQB=0.81144;DP=2559;DP4=1314,1162,11,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72033e-07;MQSB=0.998165;RPB=0.575638;SGB=71.6954;VDB=0.225612;EFF=INTRON(MODIFIER||||516|LOC_Os01g21960|protein_coding|CODING|LOC_Os01g21960.1|1|1) FN-106.SNP.1:12333026 chr01:012333026 0 W/12333026-12333026 FN-106 Single Base Substitution C-T UTR_3_PRIME HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2539-S.SNP.1:12356948 chr01:012356948 0 W/12356948-12356948 FN2539-S SNP A -> C AC=1;AN=198;BQB=0.110138;DP=4515;DP4=1856,2445,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.31059e-06;MQSB=0.58217;RPB=0.901358;SGB=31.9395;VDB=0.982568;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.1:12359186 chr01:012359186 0 W/12359186-12359186 FN439-S Single Base Substitution G-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN404-S.SNP.1:12364883 chr01:012364883 0 W/12364883-12364883 FN404-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN503-S.SNP.1:12370114 chr01:012370114 0 W/12370114-12370114 FN503-S Single Base Substitution C-T INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN3855-S.SNP.1:12387750 chr01:012387750 0 W/12387750-12387750 FN3855-S SNP A -> G AC=1;AN=158;BQB=0.318127;DP=2549;DP4=978,1444,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.15954e-08;MQSB=0.798624;RPB=0.99982;SGB=54.2901;VDB=0.302232;EFF=INTRON(MODIFIER||||1134|LOC_Os01g22050|protein_coding|CODING|LOC_Os01g22050.1|1|1) FN1357-S.SNP.1:12402015 chr01:012402015 0 W/12402015-12402015 FN1357-S Single Base Substitution A-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1749-S.SNP.1:12403421 chr01:012403421 0 W/12403421-12403421 FN1749-S SNP C -> T AC=2;AN=188;BQB=0.996264;DP=3800;DP4=1623,2090,28,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.16377e-23;MQSB=0.947262;RPB=0.956993;SGB=-52.4358;VDB=0.566016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.1:12418615 chr01:012418615 0 W/12418615-12418615 FN2742-S SNP C -> T AC=1;AN=200;BQB=0.988187;DP=4389;DP4=2338,1803,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0011e-09;MQSB=0.628315;RPB=0.940442;SGB=72.6852;VDB=0.0601044;EFF=INTRON(MODIFIER||||377|LOC_Os01g22120|protein_coding|CODING|LOC_Os01g22120.1|1|1) FN2327.SNP.1:12419990 chr01:012419990 0 W/12419990-12419990 FN2327 SNP C -> G AC=1;AN=192;BQB=0.654531;DP=4562;DP4=2107,1981,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.83065e-12;MQSB=0.869746;RPB=0.224557;SGB=44.3;VDB=0.513896;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.1:12425279 chr01:012425279 0 W/12425279-12425279 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN623-S.SNP.1:12427483 chr01:012427483 0 W/12427483-12427483 FN623-S Single Base Substitution C-T INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2539-S.SNP.1:12431167 chr01:012431167 0 W/12431167-12431167 FN2539-S SNP C -> T AC=2;AN=198;BQB=0.363438;DP=3732;DP4=1877,1615,19,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.92832e-18;MQSB=0.941781;RPB=0.938167;SGB=141.451;VDB=0.508969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.1:12431493 chr01:012431493 0 W/12431493-12431493 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.983119;DP=5031;DP4=2808,1841,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198768;MQB=5.81912e-10;MQSB=0.802549;RPB=0.0279631;SGB=-12.6681;VDB=0.379035;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.1:12434342 chr01:012434342 0 W/12434342-12434342 FN863-S Single Base Substitution T-C INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN506-S.SNP.1:12434669 chr01:012434669 0 W/12434669-12434669 FN506-S Single Base Substitution G-A INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2397.SNP.1:12436016 chr01:012436016 0 W/12436016-12436016 FN2397 SNP G -> A AC=1;AN=200;BQB=0.64208;DP=4699;DP4=2197,2261,5,5;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0438391;MQB=0.0748159;MQSB=0.272112;RPB=0.987085;SGB=40.4492;VDB=0.93228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.1:12444464 chr01:012444464 0 W/12444464-12444464 FN1012-S Single Base Substitution A-T INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-411.SNP.1:12445036 chr01:012445036 0 W/12445036-12445036 FN-411 Single Base Substitution A-G INTRON HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2468.SNP.1:12451393 chr01:012451393 0 W/12451393-12451393 FN2468 SNP G -> T AC=1;AN=200;BQB=0.999831;DP=4691;DP4=2334,2159,4,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000213174;MQB=0.000187596;MQSB=0.0461739;RPB=0.495785;SGB=31.2392;VDB=0.421959;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.1:12460733 chr01:012460733 0 W/12460733-12460733 FN898-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g22170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2231-S.SNP.1:12461868 chr01:012461868 0 W/12461868-12461868 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.705974;DP=5060;DP4=2007,2712,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0537549;MQB=0.148474;MQSB=8.17786e-23;RPB=0.481623;SGB=-70.442;VDB=0.239366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1214D|1821|LOC_Os01g22170|protein_coding|CODING|LOC_Os01g22170.1|3|1) FN3450-S.SNP.1:12464112 chr01:012464112 0 W/12464112-12464112 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.567135;DP=1940;DP4=632,1108,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00721649;MQB=0.0296352;MQSB=0.0512134;RPB=0.671576;SGB=8.14452;VDB=0.664517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.1:12473082 chr01:012473082 0 W/12473082-12473082 FN2690-S SNP G -> C AC=1;AN=200;BQB=0.995685;DP=4723;DP4=2198,2274,7,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0139742;MQB=0.0280064;MQSB=0.0572891;RPB=0.769121;SGB=51.0851;VDB=0.0775886;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.1:12474874 chr01:012474874 0 W/12474874-12474874 FN901-S Single Base Substitution T-C INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN4031-S.SNP.1:12475635 chr01:012475635 0 W/12475635-12475635 FN4031-S SNP G -> T AC=1;AN=168;BQB=0.932592;DP=2672;DP4=1243,1318,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0157186;MQB=0.00148285;MQSB=0.000962223;RPB=0.852571;SGB=19.9297;VDB=0.595704;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R146|1273|LOC_Os01g22190|protein_coding|CODING|LOC_Os01g22190.1|3|1) FN1304-S.SNP.1:12475963 chr01:012475963 0 W/12475963-12475963 FN1304-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g22190 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN497-S.SNP.1:12480024 chr01:012480024 0 W/12480024-12480024 FN497-S Single Base Substitution C-T INTRON HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN790-S.SNP.1:12483496 chr01:012483496 0 W/12483496-12483496 FN790-S Single Base Substitution C-T INTRON HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN466-S.SNP.1:12493849 chr01:012493849 0 W/12493849-12493849 FN466-S Single Base Substitution G-C INTRON HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN830-S.SNP.1:12496018 chr01:012496018 0 W/12496018-12496018 FN830-S Single Base Substitution T-C INTERGENIC HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2109-S.SNP.1:12496053 chr01:012496053 0 W/12496053-12496053 FN2109-S SNP A -> G AC=1;AN=168;BQB=0.0641557;DP=3346;DP4=1508,1794,18,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.86665e-13;MQSB=0.939033;RPB=0.84775;SGB=-250.167;VDB=0.261822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.1:12499494 chr01:012499494 0 W/12499494-12499494 FN2493 SNP G -> A AC=1;AN=200;BQB=0.119259;DP=4639;DP4=2102,2211,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.23643e-08;MQSB=0.834037;RPB=0.406217;SGB=-13.1102;VDB=0.388682;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.1:12510957 chr01:012510957 0 W/12510957-12510957 FN588-S Single Base Substitution G-C INTRON HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN525-S.SNP.1:12511647 chr01:012511647 0 W/12511647-12511647 FN525-S Single Base Substitution C-G INTRON HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-248.SNP.1:12512727 chr01:012512727 0 W/12512727-12512727 FN-248 Single Base Substitution C-T INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3534-S.SNP.1:12512727 chr01:012512727 0 W/12512727-12512727 FN3534-S SNP C -> T AC=2;AN=188;BQB=0.889337;DP=2960;DP4=1535,1351,17,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.02939e-16;MQSB=0.987729;RPB=0.508513;SGB=112.585;VDB=0.220471;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN3803-S.SNP.1:12512727 chr01:012512727 0 W/12512727-12512727 FN3803-S SNP C -> T AC=2;AN=190;BQB=0.988316;DP=2583;DP4=1229,1257,7,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.12623e-14;MQSB=0.998949;RPB=0.428711;SGB=108.296;VDB=0.620203;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN-314.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN-314 Single Base Substitution G-A INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1276-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN1276-S Single Base Substitution G-A INTRON HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1366-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN1366-S Single Base Substitution G-A INTRON HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1445-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN1445-S Single Base Substitution G-A INTRON HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1745-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN1745-S SNP G -> A AC=2;AN=188;BQB=0.961464;DP=1649;DP4=854,760,5,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.6164e-06;MQSB=0.997739;RPB=0.982284;SGB=35.9843;VDB=0.756821;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN2580-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN2580-S SNP G -> A AC=2;AN=198;BQB=0.297466;DP=3800;DP4=1972,1619,20,13;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=6.72337e-13;MQSB=0.764077;RPB=0.993879;SGB=146.046;VDB=0.440519;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN2739-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.251848;DP=4499;DP4=2346,1891,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.11765e-16;MQSB=1;RPB=0.864422;SGB=63.3521;VDB=0.930315;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN3477-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN3477-S SNP G -> A AC=2;AN=184;BQB=0.114585;DP=3340;DP4=1913,1278,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.27066e-07;MQSB=0.993106;RPB=0.97772;SGB=93.9603;VDB=0.511972;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN3699-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN3699-S SNP G -> A AC=2;AN=190;BQB=0.768427;DP=2227;DP4=1202,892,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.26711e-16;MQSB=0.791901;RPB=0.920442;SGB=85.8548;VDB=0.0137317;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN3779-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.588328;DP=2684;DP4=1514,1026,18,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.05167e-14;MQSB=0.981256;RPB=0.209629;SGB=107.178;VDB=0.397291;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN660-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN660-S Single Base Substitution G-A INTRON HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN852-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN852-S Single Base Substitution G-A INTRON HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN864-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN864-S Single Base Substitution G-A INTRON HOMO SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN944-S.SNP.1:12513187 chr01:012513187 0 W/12513187-12513187 FN944-S Single Base Substitution G-A INTRON HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2630-S.SNP.1:12514677 chr01:012514677 0 W/12514677-12514677 FN2630-S SNP G -> C AC=1;AN=200;BQB=0.946006;DP=4871;DP4=2033,2571,12,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.31159e-21;MQSB=0.994734;RPB=0.929313;SGB=76.378;VDB=0.560528;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN-277.SNP.1:12514939 chr01:012514939 0 W/12514939-12514939 FN-277 Single Base Substitution G-T INTRON HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3778-S.SNP.1:12515057 chr01:012515057 0 W/12515057-12515057 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.982485;DP=2630;DP4=1420,1120,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000760456;MQB=7.40964e-10;MQSB=0.869453;RPB=0.539293;SGB=76.4186;VDB=0.303136;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN-159.SNP.1:12515607 chr01:012515607 0 W/12515607-12515607 FN-159 Single Base Substitution C-G INTRON HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3369-S.SNP.1:12516979 chr01:012516979 0 W/12516979-12516979 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.996898;DP=3735;DP4=2119,1487,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.32324e-09;MQSB=0.724699;RPB=0.81295;SGB=66.8296;VDB=0.600127;EFF=INTRON(MODIFIER||||347|LOC_Os01g22249|protein_coding|CODING|LOC_Os01g22249.1|1|1) FN2595-S.SNP.1:12519952 chr01:012519952 0 W/12519952-12519952 FN2595-S SNP A -> G AC=1;AN=198;BQB=0.493379;DP=3777;DP4=1929,1598,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.64776e-07;MQSB=0.00353183;RPB=0.931977;SGB=21.559;VDB=0.95731;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.1:12522196 chr01:012522196 0 W/12522196-12522196 FN1753-S SNP C -> A AC=1;AN=188;BQB=0.620283;DP=4267;DP4=2011,2198,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0365596;MQB=0.999576;MQSB=0.0342272;RPB=0.973265;SGB=-76.4696;VDB=0.0231357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A192D|1261|LOC_Os01g22270|protein_coding|CODING|LOC_Os01g22270.1|2|1) FN3559-S.SNP.1:12522338 chr01:012522338 0 W/12522338-12522338 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.534805;DP=2580;DP4=1308,1222,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00387597;MQB=0.000432208;MQSB=0.52916;RPB=0.89162;SGB=71.6954;VDB=0.726712;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N239|1261|LOC_Os01g22270|protein_coding|CODING|LOC_Os01g22270.1|2|1) FN1275-S.SNP.1:12530804 chr01:012530804 0 W/12530804-12530804 FN1275-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN1727-S.SNP.1:12548368 chr01:012548368 0 W/12548368-12548368 FN1727-S SNP T -> C AC=1;AN=188;BQB=0.219583;DP=3568;DP4=1647,1853,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.56827e-05;MQSB=0.993199;RPB=0.999719;SGB=-86.4405;VDB=0.03207;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.1:12554294 chr01:012554294 0 W/12554294-12554294 FN2200-S SNP G -> A AC=2;AN=190;BQB=0.911429;DP=4958;DP4=2344,2290,23,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000403388;MQB=3.1748e-13;MQSB=0.76422;RPB=0.713157;SGB=-47.0314;VDB=0.313855;EFF=INTRON(MODIFIER||||356|LOC_Os01g22336|protein_coding|CODING|LOC_Os01g22336.1|1|1) FN1573-S.SNP.1:12558108 chr01:012558108 0 W/12558108-12558108 FN1573-S Single Base Substitution A-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1068-S.SNP.1:12560140 chr01:012560140 0 W/12560140-12560140 FN1068-S Single Base Substitution T-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN-245.SNP.1:12561500 chr01:012561500 0 W/12561500-12561500 FN-245 Single Base Substitution T-C INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2658-S.SNP.1:12571703 chr01:012571703 0 W/12571703-12571703 FN2658-S SNP A -> G AC=1;AN=200;BQB=0.00813208;DP=5087;DP4=2127,2729,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46341e-06;MQSB=0.784712;RPB=0.655755;SGB=-13.7154;VDB=0.466821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.1:12574082 chr01:012574082 0 W/12574082-12574082 FN1329-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2592-S.SNP.1:12580742 chr01:012580742 0 W/12580742-12580742 FN2592-S SNP C -> A AC=2;AN=198;BQB=0.757939;DP=5493;DP4=2547,2656,21,25;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00018205;MQB=0.00038134;MQSB=0.325327;RPB=0.339966;SGB=155.193;VDB=0.497379;EFF=INTRON(MODIFIER||||351|LOC_Os01g22370|protein_coding|CODING|LOC_Os01g22370.1|1|1) FN1285-S.SNP.1:12586442 chr01:012586442 0 W/12586442-12586442 FN1285-S Single Base Substitution T-A INTRON HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN518-S.SNP.1:12591264 chr01:012591264 0 W/12591264-12591264 FN518-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g22390 WD domain containing protein, putative, expressed SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN518-S.SNP.1:12591267 chr01:012591267 0 W/12591267-12591267 FN518-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g22390 WD domain containing protein, putative, expressed SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2226-S.SNP.1:12597107 chr01:012597107 0 W/12597107-12597107 FN2226-S SNP C -> T AC=1;AN=190;BQB=0.921669;DP=4693;DP4=2107,1999,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.55878e-13;MQSB=0.0274253;RPB=0.903566;SGB=75.1932;VDB=0.535029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.1:12611106 chr01:012611106 0 W/12611106-12611106 FN1522-S Single Base Substitution C-T INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1643-S.SNP.1:12624972 chr01:012624972 0 W/12624972-12624972 FN1643-S Single Base Substitution C-G INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN943-S.SNP.1:12627072 chr01:012627072 0 W/12627072-12627072 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN890-S.SNP.1:12628498 chr01:012628498 0 W/12628498-12628498 FN890-S Single Base Substitution A-G INTRON HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN_398-3-4-5.SNP.1:12636583 chr01:012636583 0 W/12636583-12636583 FN_398-3-4-5 Single Base Substitution T-G UTR_3_PRIME HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN-123.SNP.1:12639072 chr01:012639072 0 W/12639072-12639072 FN-123 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g22480 OsFBDUF4 - F-box and DUF domain containing protein, expressed SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3885-S.SNP.1:12640088 chr01:012640088 0 W/12640088-12640088 FN3885-S SNP G -> A AC=2;AN=158;BQB=0.809873;DP=2426;DP4=1099,1203,21,33;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.13046e-25;MQSB=0.922798;RPB=0.962104;SGB=193.876;VDB=0.999223;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R53|426|LOC_Os01g22480|protein_coding|CODING|LOC_Os01g22480.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R53|426|LOC_Os01g22480|protein_coding|CODING|LOC_Os01g22480.2|2|1) FN2734-S.SNP.1:12650475 chr01:012650475 0 W/12650475-12650475 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.220227;DP=5291;DP4=2624,2431,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.52902e-16;MQSB=0.994392;RPB=0.348386;SGB=58.1418;VDB=0.712151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.1:12651770 chr01:012651770 0 W/12651770-12651770 FN1389-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN-334.SNP.1:12658613 chr01:012658613 0 W/12658613-12658613 FN-334 Single Base Substitution C-T INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN951-S.SNP.1:12659028 chr01:012659028 0 W/12659028-12659028 FN951-S Single Base Substitution C-A INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2454.SNP.1:12659766 chr01:012659766 0 W/12659766-12659766 FN2454 SNP A -> G AC=1;AN=200;BQB=0.901036;DP=4880;DP4=2381,2218,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.14287e-07;MQSB=0.996359;RPB=0.52738;SGB=58.8698;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.1:12660095 chr01:012660095 0 W/12660095-12660095 FN2455 SNP C -> T AC=1;AN=200;BQB=0.968607;DP=4714;DP4=2012,2438,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20811e-13;MQSB=0.807437;RPB=0.594541;SGB=14.3054;VDB=0.411302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.1:12660913 chr01:012660913 0 W/12660913-12660913 FN2120-S SNP G -> A AC=2;AN=168;BQB=0.562675;DP=2378;DP4=1194,1111,17,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.12965e-17;MQSB=0.984656;RPB=0.986236;SGB=70.8011;VDB=0.847854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.1:12667208 chr01:012667208 0 W/12667208-12667208 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.279185;DP=3931;DP4=1875,1803,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.40242e-07;MQSB=0.858429;RPB=0.954673;SGB=2.96892;VDB=0.239607;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.1:12674053 chr01:012674053 0 W/12674053-12674053 FN1213-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1302-S.SNP.1:12675262 chr01:012675262 0 W/12675262-12675262 FN1302-S Single Base Substitution C-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN-70.SNP.1:12682467 chr01:012682467 0 W/12682467-12682467 FN-70 Single Base Substitution T-G INTRON HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN3373-S.SNP.1:12686863 chr01:012686863 0 W/12686863-12686863 FN3373-S SNP A -> G AC=1;AN=184;BQB=0.926641;DP=2953;DP4=1374,1443,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.74708e-06;MQSB=0.997052;RPB=0.767252;SGB=35.1773;VDB=0.811748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.1:12688697 chr01:012688697 0 W/12688697-12688697 FN1053-S Single Base Substitution A-G INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2634-S.SNP.1:12688714 chr01:012688714 0 W/12688714-12688714 FN2634-S SNP A -> G AC=1;AN=200;BQB=0.955721;DP=4846;DP4=2169,2472,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206356;MQB=1.04506e-18;MQSB=0.992435;RPB=0.966349;SGB=105.163;VDB=0.95366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.1:12691369 chr01:012691369 0 W/12691369-12691369 FN2742-S SNP T -> C AC=1;AN=200;BQB=0.941949;DP=4954;DP4=2399,2333,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.53393e-15;MQSB=0.983678;RPB=0.999881;SGB=58.1418;VDB=0.669789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.1:12693421 chr01:012693421 0 W/12693421-12693421 FN2333 SNP G -> A AC=1;AN=192;BQB=0.256988;DP=4150;DP4=1800,1954,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.12941e-14;MQSB=0.279753;RPB=0.904471;SGB=108.547;VDB=0.725864;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.1:12697982 chr01:012697982 0 W/12697982-12697982 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN3105-S.SNP.1:12698015 chr01:012698015 0 W/12698015-12698015 FN3105-S SNP T -> A AC=1;AN=184;BQB=0.997347;DP=2894;DP4=1285,1523,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67418e-08;MQSB=0.972601;RPB=0.999212;SGB=23.2751;VDB=0.468588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3481-S.SNP.1:12698015 chr01:012698015 0 W/12698015-12698015 FN3481-S SNP T -> A AC=2;AN=184;BQB=0.795898;DP=2622;DP4=1108,1414,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.71676e-16;MQSB=0.986131;RPB=0.973001;SGB=121.091;VDB=0.899434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.1:12698015 chr01:012698015 0 W/12698015-12698015 FN3992-S SNP T -> A AC=2;AN=168;BQB=0.999992;DP=2593;DP4=1073,1407,11,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.05994e-21;MQSB=0.978676;RPB=0.451974;SGB=34.2378;VDB=0.746071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.1:12701769 chr01:012701769 0 W/12701769-12701769 FN1532-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2293.SNP.1:12705356 chr01:012705356 0 W/12705356-12705356 FN2293 SNP C -> T AC=1;AN=192;BQB=0.929913;DP=4675;DP4=2243,2192,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91422e-10;MQSB=0.965309;RPB=0.232754;SGB=67.4678;VDB=0.274938;EFF=SPLICE_SITE_DONOR(HIGH||||329|LOC_Os01g22600|protein_coding|CODING|LOC_Os01g22600.1|5|1),INTRON(MODIFIER||||329|LOC_Os01g22600|protein_coding|CODING|LOC_Os01g22600.1|5|1);LOF=(LOC_Os01g22600|LOC_Os01g22600|1|1.00) FN1276-S.SNP.1:12705443 chr01:012705443 0 W/12705443-12705443 FN1276-S Single Base Substitution C-T STOP_GAINED HET LOC_Os01g22600 mitochondrial carrier protein, putative, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1276-S.SNP.1:12705446 chr01:012705446 0 W/12705446-12705446 FN1276-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g22600 mitochondrial carrier protein, putative, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN849-S.SNP.1:12713104 chr01:012713104 0 W/12713104-12713104 FN849-S Single Base Substitution C-G INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2767-S.SNP.1:12714160 chr01:012714160 0 W/12714160-12714160 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.690946;DP=3534;DP4=1550,1822,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000644536;MQSB=0.971764;RPB=0.655218;SGB=13.7737;VDB=0.855713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.1:12724036 chr01:012724036 0 W/12724036-12724036 FN3105-S SNP G -> T AC=1;AN=184;BQB=0.42515;DP=2804;DP4=1592,987,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0064194;MQB=0.000294751;MQSB=9.80909e-45;RPB=0.704137;SGB=28.7043;VDB=0.0901113;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G131|425|LOC_Os01g22620|protein_coding|CODING|LOC_Os01g22620.1|1|1) FN2794-S.SNP.1:12733282 chr01:012733282 0 W/12733282-12733282 FN2794-S SNP T -> C AC=1;AN=198;BQB=0.989424;DP=4388;DP4=1994,2187,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.06341e-10;MQSB=0.765;RPB=0.85471;SGB=34.5346;VDB=0.479824;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.1:12736041 chr01:012736041 0 W/12736041-12736041 FN522-S Single Base Substitution G-A INTRON HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3425-S.SNP.1:12739924 chr01:012739924 0 W/12739924-12739924 FN3425-S SNP C -> T AC=1;AN=184;BQB=0.921719;DP=2860;DP4=1240,1521,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55261e-08;MQSB=0.996251;RPB=0.610316;SGB=62.3078;VDB=0.118547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A40T|142|LOC_Os01g22650|protein_coding|CODING|LOC_Os01g22650.1|1|1) FN869-S.SNP.1:12740415 chr01:012740415 0 W/12740415-12740415 FN869-S Single Base Substitution G-A INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-117.SNP.1:12748987 chr01:012748987 0 W/12748987-12748987 FN-117 Single Base Substitution T-A INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN1400-S.SNP.1:12753756 chr01:012753756 0 W/12753756-12753756 FN1400-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1211-S.SNP.1:12758482 chr01:012758482 0 W/12758482-12758482 FN1211-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN_955-1.SNP.1:12761809 chr01:012761809 0 W/12761809-12761809 FN_955-1 Single Base Substitution T-C Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN-39.SNP.1:12766663 chr01:012766663 0 W/12766663-12766663 FN-39 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g22720 expressed protein SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN2609-S.SNP.1:12767571 chr01:012767571 0 W/12767571-12767571 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.883935;DP=4153;DP4=2186,1736,19,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.84562e-16;MQSB=0.999597;RPB=0.981183;SGB=97.671;VDB=0.232296;EFF=INTRON(MODIFIER||||291|LOC_Os01g22720|protein_coding|CODING|LOC_Os01g22720.1|2|1) FN2083-S.SNP.1:12771620 chr01:012771620 0 W/12771620-12771620 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.139514;DP=3509;DP4=1689,1783,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.31273e-07;MQSB=0.760844;RPB=0.198614;SGB=-16.2342;VDB=0.22877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.1:12787246 chr01:012787246 0 W/12787246-12787246 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.566696;DP=4669;DP4=2066,2430,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.133005;MQB=0.460854;MQSB=8.45e-14;RPB=0.918832;SGB=53.3568;VDB=0.563978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1419R|1986|LOC_Os01g22750|protein_coding|CODING|LOC_Os01g22750.1|3|1) FN4158-S.SNP.1:12787317 chr01:012787317 0 W/12787317-12787317 FN4158-S SNP C -> T AC=1;AN=170;BQB=0.333388;DP=2898;DP4=1398,1428,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=27;MQ0F=0.162181;MQB=0.989028;MQSB=1.95488e-10;RPB=0.578098;SGB=52.3148;VDB=0.602503;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1395*|1986|LOC_Os01g22750|protein_coding|CODING|LOC_Os01g22750.1|3|1) FN322-S.SNP.1:12806705 chr01:012806705 0 W/12806705-12806705 FN322-S Single Base Substitution T-C INTRON HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2201-S.SNP.1:12810481 chr01:012810481 0 W/12810481-12810481 FN2201-S SNP G -> T AC=1;AN=190;BQB=0.990657;DP=4919;DP4=2083,2350,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000406587;MQB=8.33249e-07;MQSB=0.000363187;RPB=0.992469;SGB=-13.7759;VDB=0.710475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.1:12818190 chr01:012818190 0 W/12818190-12818190 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.857905;DP=3018;DP4=1621,1310,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.62798e-15;MQSB=0.700691;RPB=0.577942;SGB=121.672;VDB=0.287789;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.1:12820780 chr01:012820780 0 W/12820780-12820780 FN-151 Single Base Substitution G-C INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2435.SNP.1:12820780 chr01:012820780 0 W/12820780-12820780 FN2435 SNP G -> C AC=2;AN=200;BQB=0.98735;DP=4926;DP4=2358,2288,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14259e-22;MQSB=0.784648;RPB=0.937569;SGB=92.009;VDB=0.202925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.1:12823354 chr01:012823354 0 W/12823354-12823354 FN2724-S SNP A -> G AC=1;AN=200;BQB=0.955236;DP=4537;DP4=2347,1973,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00154287;MQB=7.13939e-07;MQSB=0.000175282;RPB=0.876298;SGB=29.4541;VDB=0.977644;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.1:12829199 chr01:012829199 0 W/12829199-12829199 FN436-S Single Base Substitution C-T STOP_GAINED HET LOC_Os01g22830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-212.SNP.1:12831901 chr01:012831901 0 W/12831901-12831901 FN-212 Single Base Substitution C-T INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2163-S.SNP.1:12833862 chr01:012833862 0 W/12833862-12833862 FN2163-S SNP G -> A AC=1;AN=168;BQB=6.72105e-05;DP=3798;DP4=2013,1735,14,16;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000263296;MQB=0.000189664;MQSB=0.103737;RPB=0.566334;SGB=-285.602;VDB=0.112489;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A321|940|LOC_Os01g22840|protein_coding|CODING|LOC_Os01g22840.1|2|1) FN2397.SNP.1:12837085 chr01:012837085 0 W/12837085-12837085 FN2397 SNP G -> A AC=1;AN=200;BQB=0.832417;DP=3851;DP4=2049,1575,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.76558e-06;MQSB=0.989975;RPB=0.592041;SGB=29.4541;VDB=0.52194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.1:12838372 chr01:012838372 0 W/12838372-12838372 FN4134-S SNP G -> A AC=2;AN=182;BQB=0.964817;DP=3001;DP4=1602,1317,19,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.7448e-22;MQSB=0.624556;RPB=0.917639;SGB=123.399;VDB=0.365976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.1:12839866 chr01:012839866 0 W/12839866-12839866 FN3833-S SNP G -> A AC=1;AN=190;BQB=0.609849;DP=2757;DP4=1254,1386,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37245e-06;MQSB=0.890298;RPB=0.967294;SGB=36.1006;VDB=0.424341;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S131|287|LOC_Os01g22850|protein_coding|CODING|LOC_Os01g22850.1|2|1) FN2734-S.SNP.1:12847736 chr01:012847736 0 W/12847736-12847736 FN2734-S SNP G -> C AC=1;AN=200;BQB=0.579742;DP=4014;DP4=1794,1808,8,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00323866;MQB=0.00216004;MQSB=1.55313e-35;RPB=0.905257;SGB=3.06925;VDB=0.972929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.1:12850770 chr01:012850770 0 W/12850770-12850770 FN3115-S SNP A -> G AC=1;AN=184;BQB=0.993921;DP=2851;DP4=1424,1327,16,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44012e-10;MQSB=0.940816;RPB=0.999991;SGB=-12.6269;VDB=0.250262;EFF=INTRON(MODIFIER||||183|LOC_Os01g22870|protein_coding|CODING|LOC_Os01g22870.1|4|1) FN3115-S.SNP.1:12850771 chr01:012850771 0 W/12850771-12850771 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.824703;DP=2845;DP4=1416,1339,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68866e-11;MQSB=0.919509;RPB=0.929766;SGB=49.835;VDB=0.533976;EFF=INTRON(MODIFIER||||183|LOC_Os01g22870|protein_coding|CODING|LOC_Os01g22870.1|4|1) FN553-S.SNP.1:12858631 chr01:012858631 0 W/12858631-12858631 FN553-S Single Base Substitution A-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2640-S.SNP.1:12868956 chr01:012868956 0 W/12868956-12868956 FN2640-S SNP T -> A AC=1;AN=200;BQB=0.978943;DP=4771;DP4=1969,2327,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59737e-11;MQSB=0.994954;RPB=0.9927;SGB=37.3004;VDB=0.781662;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.1:12873152 chr01:012873152 0 W/12873152-12873152 FN-226 Single Base Substitution T-C INTRON HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3845-S.SNP.1:12876216 chr01:012876216 0 W/12876216-12876216 FN3845-S SNP C -> T AC=2;AN=190;BQB=0.920363;DP=2524;DP4=1266,1128,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27801e-16;MQSB=0.994676;RPB=0.100273;SGB=117.403;VDB=0.167151;EFF=INTRON(MODIFIER||||464|LOC_Os01g22910|protein_coding|CODING|LOC_Os01g22910.1|3|1) FN1430-S.SNP.1:12876381 chr01:012876381 0 W/12876381-12876381 FN1430-S Single Base Substitution G-T INTRON HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2692-S.SNP.1:12876623 chr01:012876623 0 W/12876623-12876623 FN2692-S SNP T -> C AC=1;AN=200;BQB=0.84995;DP=4933;DP4=2414,2330,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.48865e-09;MQSB=0.945831;RPB=0.976924;SGB=58.8698;VDB=0.37956;EFF=INTRON(MODIFIER||||464|LOC_Os01g22910|protein_coding|CODING|LOC_Os01g22910.1|3|1) FN3506-S.SNP.1:12878002 chr01:012878002 0 W/12878002-12878002 FN3506-S SNP C -> A AC=1;AN=188;BQB=0.993273;DP=2773;DP4=1377,1346,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.01999e-06;MQSB=0.946731;RPB=0.826819;SGB=35.3493;VDB=0.378861;EFF=INTRON(MODIFIER||||464|LOC_Os01g22910|protein_coding|CODING|LOC_Os01g22910.1|2|1) FN3770-S.SNP.1:12880587 chr01:012880587 0 W/12880587-12880587 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.992726;DP=2399;DP4=1409,938,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5201e-05;MQSB=0.991343;RPB=0.442721;SGB=30.8803;VDB=0.668412;EFF=INTRON(MODIFIER||||464|LOC_Os01g22910|protein_coding|CODING|LOC_Os01g22910.1|1|1) FN3993-S.SNP.1:12882365 chr01:012882365 0 W/12882365-12882365 FN3993-S SNP C -> T AC=2;AN=168;BQB=0.99912;DP=1949;DP4=1056,797,13,14;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.2229e-13;MQSB=0.930218;RPB=0.577189;SGB=82.7794;VDB=0.0140285;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R59H|464|LOC_Os01g22910|protein_coding|CODING|LOC_Os01g22910.1|1|1) FN2215-S.SNP.1:12883054 chr01:012883054 0 W/12883054-12883054 FN2215-S SNP G -> A AC=1;AN=190;BQB=0.615624;DP=4908;DP4=2155,2372,25,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203749;MQB=9.78854e-17;MQSB=0.797121;RPB=0.293802;SGB=-92.1339;VDB=0.752135;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.1:12885196 chr01:012885196 0 W/12885196-12885196 FN1634-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g22920 gibberellin 2-beta-dioxygenase, putative, expressed SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1634-S.SNP.1:12885197 chr01:012885197 0 W/12885197-12885197 FN1634-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g22920 gibberellin 2-beta-dioxygenase, putative, expressed SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2436.SNP.1:12885411 chr01:012885411 0 W/12885411-12885411 FN2436 SNP G -> C AC=1;AN=200;BQB=0.992099;DP=4134;DP4=2019,1765,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84996e-08;MQSB=0.855704;RPB=0.784861;SGB=1.46408;VDB=0.699825;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A47|176|LOC_Os01g22920|protein_coding|CODING|LOC_Os01g22920.1|1|1) FN2347.SNP.1:12887431 chr01:012887431 0 W/12887431-12887431 FN2347 SNP A -> C AC=2;AN=192;BQB=0.963019;DP=4532;DP4=2066,2070,32,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.33418e-26;MQSB=0.942275;RPB=0.917361;SGB=-116.184;VDB=0.114089;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.1:12888627 chr01:012888627 0 W/12888627-12888627 W360-2S-2 Single Base Substitution A-T INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3852-S.SNP.1:12890245 chr01:012890245 0 W/12890245-12890245 FN3852-S SNP T -> C AC=2;AN=158;BQB=0.967728;DP=2200;DP4=1087,1041,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.09112e-11;MQSB=0.911518;RPB=0.652161;SGB=90.7616;VDB=0.703648;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.1:12891436 chr01:012891436 0 W/12891436-12891436 FN4104-S SNP T -> C AC=2;AN=182;BQB=0.978439;DP=2838;DP4=1266,1387,4,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.31378e-07;MQSB=0.989473;RPB=0.951567;SGB=2.12788;VDB=0.898372;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P26|144|LOC_Os01g22930|protein_coding|CODING|LOC_Os01g22930.1|1|1) FN2765-S.SNP.1:12893504 chr01:012893504 0 W/12893504-12893504 FN2765-S SNP A -> G AC=1;AN=198;BQB=0.240888;DP=4536;DP4=2352,1972,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20941e-11;MQSB=0.712109;RPB=0.744284;SGB=77.1196;VDB=0.673997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.1:12900153 chr01:012900153 0 W/12900153-12900153 FN2668-S SNP C -> A AC=1;AN=200;BQB=0.918906;DP=4903;DP4=2420,2186,22,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00183561;MQB=3.31142e-19;MQSB=0.00145606;RPB=0.990093;SGB=123.188;VDB=0.475644;EFF=INTRON(MODIFIER||||500|LOC_Os01g22954|protein_coding|CODING|LOC_Os01g22954.1|7|1) FN2495.SNP.1:12924369 chr01:012924369 0 W/12924369-12924369 FN2495 SNP C -> T AC=2;AN=200;BQB=0.108857;DP=3492;DP4=1442,1862,7,9;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000572738;MQB=2.69663e-05;MQSB=4.19014e-19;RPB=0.999847;SGB=68.0801;VDB=0.934281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D120N|139|LOC_Os01g22990|protein_coding|CODING|LOC_Os01g22990.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D120N|222|LOC_Os01g22990|protein_coding|CODING|LOC_Os01g22990.1|1|1) FN3799-S.SNP.1:12926505 chr01:012926505 0 W/12926505-12926505 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.944481;DP=2577;DP4=1499,936,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69699e-05;MQSB=0.970053;RPB=0.878595;SGB=39.9877;VDB=0.0591175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.1:12926505 chr01:012926505 0 W/12926505-12926505 FN3861-S SNP C -> T AC=2;AN=158;BQB=0.995594;DP=2275;DP4=1289,865,12,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.67508e-11;MQSB=0.965952;RPB=0.991165;SGB=50.9207;VDB=0.308786;EFF=INTERGENIC(MODIFIER||||||||||1) FN-84.SNP.1:12928092 chr01:012928092 0 W/12928092-12928092 FN-84 Single Base Substitution C-T INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN3798-S.SNP.1:12934698 chr01:012934698 0 W/12934698-12934698 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.96568;DP=2916;DP4=1373,1441,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38457e-09;MQSB=0.993026;RPB=0.989358;SGB=50.3161;VDB=0.434267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.1:12938926 chr01:012938926 0 W/12938926-12938926 FN2149-S SNP C -> A AC=2;AN=168;BQB=0.0444128;DP=4239;DP4=2274,1859,14,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.1008e-09;MQSB=0.97998;RPB=0.733398;SGB=-431.005;VDB=0.0852992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.1:12939948 chr01:012939948 0 W/12939948-12939948 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.630789;DP=4787;DP4=2304,2084,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.55375e-16;MQSB=0.703374;RPB=0.867865;SGB=71.1676;VDB=0.68119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.1:12942681 chr01:012942681 0 W/12942681-12942681 FN3426-S SNP A -> G AC=1;AN=184;BQB=0.952729;DP=2962;DP4=1522,1355,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00033761;MQB=7.79884e-10;MQSB=0.789288;RPB=0.751167;SGB=71.3514;VDB=0.663608;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.1:12947225 chr01:012947225 0 W/12947225-12947225 FN2136-S SNP G -> C AC=1;AN=168;BQB=0.824733;DP=2427;DP4=1067,1303,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.35086e-09;MQSB=0.0747714;RPB=0.772763;SGB=61.0344;VDB=0.252585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.1:12954957 chr01:012954957 0 W/12954957-12954957 FN2237-S SNP C -> A AC=1;AN=190;BQB=0.00163338;DP=9237;DP4=3514,4501,169,353;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.169644;MQB=0;MQSB=0;RPB=1.82232e-26;SGB=-6387.16;VDB=2.37046e-16;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P1082|1795|LOC_Os01g23020|protein_coding|CODING|LOC_Os01g23020.1|3|1) FN3809-S.SNP.1:12966329 chr01:012966329 0 W/12966329-12966329 FN3809-S SNP A -> C AC=1;AN=190;BQB=0.73092;DP=5840;DP4=2637,2937,14,21;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.192808;MQB=0.819084;MQSB=0;RPB=0.660029;SGB=114.286;VDB=0.316706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I439S|1664|LOC_Os01g23040|protein_coding|CODING|LOC_Os01g23040.1|4|1) W42-1-3S-1.SNP.1:12972454 chr01:012972454 0 W/12972454-12972454 W42-1-3S-1 Single Base Substitution A-G INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN828-S.SNP.1:12983034 chr01:012983034 0 W/12983034-12983034 FN828-S Single Base Substitution C-A INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3429-S.SNP.1:12983829 chr01:012983829 0 W/12983829-12983829 FN3429-S SNP G -> T AC=2;AN=184;BQB=0.346424;DP=2771;DP4=902,1727,3,9;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=0.00070726;MQSB=0.00109654;RPB=0.887681;SGB=48.7425;VDB=0.0335384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.1:12988430 chr01:012988430 0 W/12988430-12988430 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.664121;DP=5225;DP4=2466,2549,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.25748e-16;MQSB=0.94408;RPB=0.383484;SGB=101.557;VDB=0.95967;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.1:12988947 chr01:012988947 0 W/12988947-12988947 FN-291 Single Base Substitution G-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN554-S.SNP.1:12990180 chr01:012990180 0 W/12990180-12990180 FN554-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2151-S.SNP.1:12991637 chr01:012991637 0 W/12991637-12991637 FN2151-S SNP T -> C AC=1;AN=168;BQB=0.002186;DP=6315;DP4=3022,3233,9,18;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.336194;MQSB=0.0155781;RPB=0.289268;SGB=-42.92;VDB=0.685601;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N57|827|LOC_Os01g23090|protein_coding|CODING|LOC_Os01g23090.1|1|1) FN4158-S.SNP.1:12993361 chr01:012993361 0 W/12993361-12993361 FN4158-S SNP C -> T AC=1;AN=170;BQB=0.954443;DP=4616;DP4=2180,2332,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.87914e-09;MQSB=0.994581;RPB=0.706631;SGB=24.7692;VDB=0.482837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T439I|827|LOC_Os01g23090|protein_coding|CODING|LOC_Os01g23090.1|3|1) FN266-S.SNP.1:12999421 chr01:012999421 0 W/12999421-12999421 FN266-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2572-S.SNP.1:13000231 chr01:013000231 0 W/13000231-13000231 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.9948;DP=3985;DP4=1947,1872,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.2891e-11;MQSB=0.906765;RPB=0.834992;SGB=81.7147;VDB=0.903782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.1:13013520 chr01:013013520 0 W/13013520-13013520 FN2344 SNP C -> G AC=1;AN=192;BQB=0.811844;DP=5995;DP4=2336,3333,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=10;MQ0F=0.634028;MQB=0.104242;MQSB=9.19681e-33;RPB=0.998172;SGB=75.0722;VDB=0.61437;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.1:13016779 chr01:013016779 0 W/13016779-13016779 W278-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN4130-S.SNP.1:13016841 chr01:013016841 0 W/13016841-13016841 FN4130-S SNP G -> C AC=1;AN=182;BQB=0.986833;DP=3112;DP4=1593,1453,1,11;HOB=6.03792e-05;ICB=0.000121422;MQ=28;MQ0F=0.205334;MQB=0.152106;MQSB=0;RPB=0.758702;SGB=48.6223;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.1:13019073 chr01:013019073 0 W/13019073-13019073 FN2392 SNP C -> T AC=1;AN=200;BQB=0.383845;DP=2885;DP4=1485,990,8,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0117851;MQB=0.000399241;MQSB=0.00313507;RPB=0.560623;SGB=95.7111;VDB=0.514209;EFF=INTRON(MODIFIER||||484|LOC_Os01g23160|protein_coding|CODING|LOC_Os01g23160.1|1|1) FN889-S.SNP.1:13019815 chr01:013019815 0 W/13019815-13019815 FN889-S Single Base Substitution A-G INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2291.SNP.1:13020010 chr01:013020010 0 W/13020010-13020010 FN2291 SNP G -> A AC=1;AN=192;BQB=0.899541;DP=5512;DP4=2856,2416,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.11103;MQB=0.837873;MQSB=0;RPB=0.965701;SGB=51.9931;VDB=0.56959;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||484|LOC_Os01g23160|protein_coding|CODING|LOC_Os01g23160.1|2|1),INTRON(MODIFIER||||484|LOC_Os01g23160|protein_coding|CODING|LOC_Os01g23160.1|1|1);LOF=(LOC_Os01g23160|LOC_Os01g23160|1|1.00) FN2244-S.SNP.1:13020208 chr01:013020208 0 W/13020208-13020208 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.404742;DP=5361;DP4=2232,2645,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.198097;MQB=0.524715;MQSB=0;RPB=0.838376;SGB=-2.10437;VDB=0.847359;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q150*|484|LOC_Os01g23160|protein_coding|CODING|LOC_Os01g23160.1|2|1) FN925-S.SNP.1:13036624 chr01:013036624 0 W/13036624-13036624 FN925-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g23200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2184-S.SNP.1:13038201 chr01:013038201 0 W/13038201-13038201 FN2184-S SNP T -> G AC=2;AN=190;BQB=0.696198;DP=4958;DP4=2154,2446,20,21;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0278338;MQB=1.77167e-11;MQSB=0.116914;RPB=0.883515;SGB=-1.03669;VDB=0.847512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.1:13040605 chr01:013040605 0 W/13040605-13040605 FN2134-S SNP T -> C AC=1;AN=168;BQB=0.166444;DP=3218;DP4=1529,1613,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.0922934;MQB=0.990629;MQSB=0.725274;RPB=0.75554;SGB=-186.896;VDB=0.298925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.1:13042429 chr01:013042429 0 W/13042429-13042429 FN3521-S SNP T -> A AC=1;AN=188;BQB=0.226235;DP=3561;DP4=1858,1508,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0134794;MQB=0.712813;MQSB=1.74068e-09;RPB=0.468164;SGB=44.4357;VDB=0.868938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.1:13047683 chr01:013047683 0 W/13047683-13047683 FN2671-S SNP T -> A AC=2;AN=200;BQB=0.631337;DP=4748;DP4=2543,1976,20,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.96697e-22;MQSB=0.999284;RPB=0.292587;SGB=160.183;VDB=0.952233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.1:13047703 chr01:013047703 0 W/13047703-13047703 FN2671-S SNP G -> C AC=2;AN=200;BQB=0.977782;DP=4772;DP4=2571,1972,20,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.82797e-19;MQSB=0.962489;RPB=0.315027;SGB=146.368;VDB=0.552696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.1:13064438 chr01:013064438 0 W/13064438-13064438 FN2534-S SNP T -> A AC=1;AN=198;BQB=0.346943;DP=5308;DP4=2775,2380,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.123775;MQB=0.980739;MQSB=0.0253955;RPB=0.477428;SGB=9.3494;VDB=0.143077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.1:13070472 chr01:013070472 0 W/13070472-13070472 FN1696-S SNP C -> T AC=2;AN=188;BQB=0.0103571;DP=2400;DP4=1337,1030,9,12;HOB=0.0210502;ICB=0.494738;MQ=13;MQ0F=0.407917;MQB=0.0281733;MQSB=0.000414439;RPB=0.583937;SGB=-88.8972;VDB=0.097568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.1:13077455 chr01:013077455 0 W/13077455-13077455 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.9971;DP=3599;DP4=1920,1560,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0188941;MQB=0.017019;MQSB=1.41222e-07;RPB=0.958741;SGB=71.8647;VDB=0.860019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A84T|569|LOC_Os01g23270|protein_coding|CODING|LOC_Os01g23270.1|2|1) FN1319-S.SNP.1:13081962 chr01:013081962 0 W/13081962-13081962 FN1319-S Single Base Substitution T-A INTRON HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2464.SNP.1:13086621 chr01:013086621 0 W/13086621-13086621 FN2464 SNP C -> T AC=1;AN=200;BQB=0.572475;DP=4411;DP4=2009,2109,8,6;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.165269;MQB=0.404602;MQSB=0;RPB=0.258765;SGB=40.2696;VDB=0.888366;EFF=INTRON(MODIFIER||||90|LOC_Os01g23300|protein_coding|CODING|LOC_Os01g23300.1|1|1) FN687-S.SNP.1:13093949 chr01:013093949 0 W/13093949-13093949 FN687-S Single Base Substitution A-T INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3888-S.SNP.1:13094073 chr01:013094073 0 W/13094073-13094073 FN3888-S SNP C -> A AC=1;AN=158;BQB=0.975816;DP=2410;DP4=1285,1000,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.42708e-11;MQSB=0.998905;RPB=0.556087;SGB=77.6532;VDB=0.400766;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L95I|171|LOC_Os01g23310|protein_coding|CODING|LOC_Os01g23310.1|4|1),SPLICE_SITE_REGION(LOW||||171|LOC_Os01g23310|protein_coding|CODING|LOC_Os01g23310.1|4|1) FN1122-S.SNP.1:13094101 chr01:013094101 0 W/13094101-13094101 FN1122-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g23310 retrotransposon, putative, centromere-specific SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2781-S.SNP.1:13097391 chr01:013097391 0 W/13097391-13097391 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.804899;DP=3973;DP4=1884,1881,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.74231e-07;MQSB=0.0461021;RPB=0.187011;SGB=7.75428;VDB=0.429535;EFF=INTRON(MODIFIER||||248|LOC_Os01g23320|protein_coding|CODING|LOC_Os01g23320.1|1|1) FN866-S.SNP.1:13099215 chr01:013099215 0 W/13099215-13099215 FN866-S Single Base Substitution A-G INTERGENIC HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN734-S.SNP.1:13105727 chr01:013105727 0 W/13105727-13105727 FN734-S Single Base Substitution T-C INTRON HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN4064-S.SNP.1:13107673 chr01:013107673 0 W/13107673-13107673 FN4064-S SNP G -> A AC=2;AN=168;BQB=0.991366;DP=1995;DP4=788,1104,10,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.41111e-09;MQSB=0.865828;RPB=0.573806;SGB=45.0404;VDB=0.398125;EFF=INTRON(MODIFIER||||1030|LOC_Os01g23330|protein_coding|CODING|LOC_Os01g23330.1|1|1) FN3674-S.SNP.1:13109470 chr01:013109470 0 W/13109470-13109470 FN3674-S SNP G -> A AC=1;AN=190;BQB=0.89799;DP=2769;DP4=1393,1279,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96807e-07;MQSB=0.992888;RPB=0.933058;SGB=53.6492;VDB=0.306242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.1:13115133 chr01:013115133 0 W/13115133-13115133 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.676561;DP=2691;DP4=1274,1305,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9341e-09;MQSB=0.844957;RPB=0.758346;SGB=53.8699;VDB=0.735046;EFF=INTRON(MODIFIER||||103|LOC_Os01g23340|protein_coding|CODING|LOC_Os01g23340.1|1|1) FN4260-S.SNP.1:13115215 chr01:013115215 0 W/13115215-13115215 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.912297;DP=2427;DP4=1148,1209,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.24446e-16;MQSB=0.99949;RPB=0.428836;SGB=110.069;VDB=0.25201;EFF=INTRON(MODIFIER||||103|LOC_Os01g23340|protein_coding|CODING|LOC_Os01g23340.1|1|1) FN4151-S.SNP.1:13115757 chr01:013115757 0 W/13115757-13115757 FN4151-S SNP C -> T AC=1;AN=170;BQB=0.800065;DP=2443;DP4=1176,1207,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.21109e-08;MQSB=0.941529;RPB=0.917403;SGB=22.3266;VDB=0.483806;EFF=INTRON(MODIFIER||||103|LOC_Os01g23340|protein_coding|CODING|LOC_Os01g23340.1|1|1) FN1049-S.SNP.1:13119445 chr01:013119445 0 W/13119445-13119445 FN1049-S Single Base Substitution A-T INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1049-S.SNP.1:13119446 chr01:013119446 0 W/13119446-13119446 FN1049-S Single Base Substitution A-T INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN4038-S.SNP.1:13119618 chr01:013119618 0 W/13119618-13119618 FN4038-S SNP T -> A AC=2;AN=168;BQB=0.797816;DP=2550;DP4=1203,1181,14,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.30686e-24;MQSB=0.368749;RPB=0.839771;SGB=192.991;VDB=0.189428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.1:13119810 chr01:013119810 0 W/13119810-13119810 FN2192-S SNP T -> A AC=1;AN=190;BQB=0.592322;DP=4914;DP4=2380,2316,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31927e-15;MQSB=0.896666;RPB=0.966422;SGB=54.3062;VDB=0.852398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.1:13122309 chr01:013122309 0 W/13122309-13122309 FN1670-S SNP G -> C AC=1;AN=188;BQB=0.00505055;DP=3878;DP4=1937,1888,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.44941e-08;MQSB=0.999717;RPB=0.96796;SGB=-181.881;VDB=0.77309;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.1:13124797 chr01:013124797 0 W/13124797-13124797 FN453-S Single Base Substitution G-A INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN845-S.SNP.1:13126198 chr01:013126198 0 W/13126198-13126198 FN845-S Single Base Substitution C-T INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2579-S.SNP.1:13127290 chr01:013127290 0 W/13127290-13127290 FN2579-S SNP C -> T AC=1;AN=198;BQB=0.870135;DP=4075;DP4=1928,1902,10,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000245399;MQB=2.07737e-08;MQSB=0.995174;RPB=0.914113;SGB=36.5539;VDB=0.936448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.1:13129417 chr01:013129417 0 W/13129417-13129417 FN3730-S SNP C -> G AC=1;AN=190;BQB=0.909726;DP=2881;DP4=1320,1456,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14607e-13;MQSB=0.649449;RPB=0.237684;SGB=99.1879;VDB=0.358797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.1:13138770 chr01:013138770 0 W/13138770-13138770 FN2223-S SNP G -> C AC=1;AN=190;BQB=0.549038;DP=4000;DP4=1925,1802,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.01225;MQB=0.0120031;MQSB=2.15969e-08;RPB=0.915472;SGB=71.6393;VDB=0.0477862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G294R|732|LOC_Os01g23370|protein_coding|CODING|LOC_Os01g23370.1|2|1) FN1269-S.SNP.1:13143629 chr01:013143629 0 W/13143629-13143629 FN1269-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1269-S.SNP.1:13143630 chr01:013143630 0 W/13143630-13143630 FN1269-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g23380 stripe rust resistance protein Yr10, putative, expressed SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2267-S.SNP.1:13144503 chr01:013144503 0 W/13144503-13144503 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.0747605;DP=3721;DP4=1740,1613,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000268745;MQB=7.50558e-08;MQSB=0.0391468;RPB=0.572019;SGB=71.8647;VDB=0.147249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A95T|825|LOC_Os01g23380|protein_coding|CODING|LOC_Os01g23380.1|1|1) FN1018-S.SNP.1:13145221 chr01:013145221 0 W/13145221-13145221 FN1018-S Single Base Substitution G-A START_LOST HOMO LOC_Os01g23390 hypothetical protein SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1103-S.SNP.1:13145221 chr01:013145221 0 W/13145221-13145221 FN1103-S Single Base Substitution G-A START_LOST HET LOC_Os01g23390 hypothetical protein SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN4146-S.SNP.1:13145976 chr01:013145976 0 W/13145976-13145976 FN4146-S SNP A -> T AC=1;AN=170;BQB=0.46139;DP=2682;DP4=1230,1345,14,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.8106e-10;MQSB=0.684671;RPB=0.530058;SGB=79.6325;VDB=0.298194;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.1:13152053 chr01:013152053 0 W/13152053-13152053 FN1381-S Single Base Substitution A-G INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1279-S.SNP.1:13152094 chr01:013152094 0 W/13152094-13152094 FN1279-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2595-S.SNP.1:13156146 chr01:013156146 0 W/13156146-13156146 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.779308;DP=4242;DP4=2255,1725,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.18724e-09;MQSB=0.984437;RPB=0.954061;SGB=9.3494;VDB=0.752893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.1:13161831 chr01:013161831 0 W/13161831-13161831 FN2697-S SNP C -> T AC=2;AN=200;BQB=0.763527;DP=4139;DP4=2145,1698,8,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.08907e-11;MQSB=0.99975;RPB=0.441256;SGB=32.0901;VDB=0.210319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.1:13161859 chr01:013161859 0 W/13161859-13161859 FN3457-S SNP C -> T AC=1;AN=184;BQB=0.90044;DP=3527;DP4=1916,1502,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03597e-06;MQSB=0.848814;RPB=0.505077;SGB=39.2697;VDB=0.202899;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.1:13162610 chr01:013162610 0 W/13162610-13162610 FN4107-S SNP A -> C AC=1;AN=182;BQB=0.447682;DP=3210;DP4=1614,1504,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.33879e-07;MQSB=0.999957;RPB=0.302078;SGB=46.1603;VDB=0.887629;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.1:13162805 chr01:013162805 0 W/13162805-13162805 FN964-S Single Base Substitution T-C INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN446-S.SNP.1:13165220 chr01:013165220 0 W/13165220-13165220 FN446-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g23430 transposon protein, putative, unclassified, expressed SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN4144-S.SNP.1:13169898 chr01:013169898 0 W/13169898-13169898 FN4144-S SNP T -> C AC=1;AN=170;BQB=0.99979;DP=2606;DP4=1207,1294,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.42507e-07;MQSB=0.92814;RPB=0.0889125;SGB=52.3148;VDB=0.376676;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.1:13174464 chr01:013174464 0 W/13174464-13174464 FN2312 SNP C -> T AC=2;AN=192;BQB=0.245224;DP=4741;DP4=2222,2193,28,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.62253e-32;MQSB=0.953243;RPB=0.268756;SGB=71.4931;VDB=0.0216468;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.1:13176878 chr01:013176878 0 W/13176878-13176878 FN4134-S SNP G -> C AC=2;AN=182;BQB=0.50805;DP=3136;DP4=1484,1561,16,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.87925e-18;MQSB=0.97725;RPB=0.998416;SGB=98.8232;VDB=0.699542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1622-S.SNP.1:13177848 chr01:013177848 0 W/13177848-13177848 FN1622-S Single Base Substitution G-T INTERGENIC Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1722-S.SNP.1:13178042 chr01:013178042 0 W/13178042-13178042 FN1722-S SNP G -> C AC=1;AN=188;BQB=0.241103;DP=3023;DP4=1535,1443,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.66609e-11;MQSB=0.999381;RPB=0.973563;SGB=-38.278;VDB=0.363669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.1:13180178 chr01:013180178 0 W/13180178-13180178 FN3662-S SNP A -> G AC=1;AN=190;BQB=0.995327;DP=2170;DP4=570,1393,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000460829;MQB=1.42318e-06;MQSB=0.437365;RPB=0.508862;SGB=39.6545;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.1:13182412 chr01:013182412 0 W/13182412-13182412 FN3378-S SNP A -> G AC=1;AN=184;BQB=0.987113;DP=2946;DP4=1434,1332,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00101833;MQB=4.4201e-10;MQSB=0.954363;RPB=0.808102;SGB=75.8731;VDB=0.661652;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N86S|210|LOC_Os01g23460|protein_coding|CODING|LOC_Os01g23460.1|2|1) FN2568-S.SNP.1:13183111 chr01:013183111 0 W/13183111-13183111 FN2568-S SNP G -> A AC=1;AN=198;BQB=0.854675;DP=4420;DP4=2269,1889,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08361e-06;MQSB=0.94618;RPB=0.967009;SGB=25.7687;VDB=0.397567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D16N|813|LOC_Os01g23470|protein_coding|CODING|LOC_Os01g23470.1|1|1) FN2301.SNP.1:13187610 chr01:013187610 0 W/13187610-13187610 FN2301 SNP G -> A AC=1;AN=192;BQB=0.884166;DP=4363;DP4=2053,1756,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.20191e-07;MQSB=0.825019;RPB=0.991846;SGB=21.2209;VDB=0.706175;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.1:13187750 chr01:013187750 0 W/13187750-13187750 FN512-S Single Base Substitution C-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2117-S.SNP.1:13193155 chr01:013193155 0 W/13193155-13193155 FN2117-S SNP C -> G AC=1;AN=168;BQB=0.00306692;DP=3935;DP4=2089,1795,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.54524e-05;MQSB=0.996074;RPB=0.999888;SGB=-39.5049;VDB=0.626368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.1:13193879 chr01:013193879 0 W/13193879-13193879 FN3709-S SNP C -> T AC=1;AN=190;BQB=0.52118;DP=2762;DP4=1297,1309,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.13522e-07;MQSB=0.887865;RPB=0.421942;SGB=-0.550503;VDB=0.810718;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.1:13198179 chr01:013198179 0 W/13198179-13198179 FN805-S Single Base Substitution C-G INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2183-S.SNP.1:13198556 chr01:013198556 0 W/13198556-13198556 FN2183-S SNP G -> C AC=2;AN=190;BQB=0.204389;DP=4752;DP4=2316,2048,46,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43342e-38;MQSB=0.0145818;RPB=0.653677;SGB=334.998;VDB=0.595109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.1:13199487 chr01:013199487 0 W/13199487-13199487 FN2551-S SNP A -> G AC=2;AN=198;BQB=0.779935;DP=3944;DP4=1575,2020,11,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.73298e-17;MQSB=0.766532;RPB=0.366497;SGB=104.861;VDB=0.717254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.1:13204505 chr01:013204505 0 W/13204505-13204505 FN1346-S Single Base Substitution C-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3800-S.SNP.1:13205852 chr01:013205852 0 W/13205852-13205852 FN3800-S SNP G -> A AC=2;AN=190;BQB=0.953697;DP=2788;DP4=1329,1359,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.56637e-10;MQSB=0.440389;RPB=0.998685;SGB=68.0854;VDB=0.63359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.1:13206949 chr01:013206949 0 W/13206949-13206949 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.64272;DP=4994;DP4=2434,2353,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.27602e-11;MQSB=0.998643;RPB=0.929682;SGB=58.2954;VDB=0.83857;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.1:13207556 chr01:013207556 0 W/13207556-13207556 FN874-S Single Base Substitution G-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3287-S.SNP.1:13212912 chr01:013212912 0 W/13212912-13212912 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.95633;DP=2840;DP4=1370,1335,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.89875e-10;MQSB=0.0400637;RPB=0.967396;SGB=75.8731;VDB=0.531381;EFF=INTRON(MODIFIER||||547|LOC_Os01g23530|protein_coding|CODING|LOC_Os01g23530.1|1|1) FN1750-S.SNP.1:13219838 chr01:013219838 0 W/13219838-13219838 FN1750-S SNP T -> A AC=1;AN=188;BQB=0.00195758;DP=4021;DP4=2086,1897,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52761e-06;MQSB=0.946484;RPB=0.848747;SGB=-38.7347;VDB=0.933228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.1:13222706 chr01:013222706 0 W/13222706-13222706 FN-222 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2337.SNP.1:13228897 chr01:013228897 0 W/13228897-13228897 FN2337 SNP G -> A AC=1;AN=192;BQB=0.972616;DP=4626;DP4=2281,2070,13,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.10978e-09;MQSB=0.971873;RPB=0.666239;SGB=54.0374;VDB=0.112499;EFF=SPLICE_SITE_REGION(LOW||||410|LOC_Os01g23560|protein_coding|CODING|LOC_Os01g23560.1|4|1),INTRON(MODIFIER||||410|LOC_Os01g23560|protein_coding|CODING|LOC_Os01g23560.1|4|1) FN1314-S.SNP.1:13229289 chr01:013229289 0 W/13229289-13229289 FN1314-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN2080-S.SNP.1:13232029 chr01:013232029 0 W/13232029-13232029 FN2080-S SNP G -> C AC=1;AN=168;BQB=0.501759;DP=2509;DP4=1781,667,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00318852;MQB=1.96134e-05;MQSB=0.286464;RPB=0.957404;SGB=-45.1967;VDB=0.704871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.1:13233497 chr01:013233497 0 W/13233497-13233497 FN1614-S Single Base Substitution A-G INTRON HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1278-S.SNP.1:13236707 chr01:013236707 0 W/13236707-13236707 FN1278-S Single Base Substitution A-T INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3723-S.SNP.1:13237725 chr01:013237725 0 W/13237725-13237725 FN3723-S SNP T -> A AC=1;AN=190;BQB=0.429338;DP=2678;DP4=1192,1212,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4468e-08;MQSB=0.775716;RPB=0.90748;SGB=-35.4322;VDB=0.192221;EFF=INTRON(MODIFIER||||773|LOC_Os01g23580|protein_coding|CODING|LOC_Os01g23580.1|1|1) FN3723-S.SNP.1:13237726 chr01:013237726 0 W/13237726-13237726 FN3723-S SNP T -> A AC=1;AN=190;BQB=0.682565;DP=2674;DP4=1248,1246,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.42068e-07;MQSB=0.718894;RPB=0.949444;SGB=36.1006;VDB=0.494876;EFF=INTRON(MODIFIER||||773|LOC_Os01g23580|protein_coding|CODING|LOC_Os01g23580.1|1|1) FN2192-S.SNP.1:13239050 chr01:013239050 0 W/13239050-13239050 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.565438;DP=3770;DP4=1481,1392,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.74544e-09;MQSB=0.999524;RPB=0.724743;SGB=-14.3297;VDB=0.11727;EFF=INTRON(MODIFIER||||773|LOC_Os01g23580|protein_coding|CODING|LOC_Os01g23580.1|1|1) W385-6-8-4.SNP.1:13243853 chr01:013243853 0 W/13243853-13243853 W385-6-8-4 Single Base Substitution G-T INTRON HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2215-S.SNP.1:13253215 chr01:013253215 0 W/13253215-13253215 FN2215-S SNP G -> A AC=2;AN=190;BQB=0.923786;DP=4988;DP4=2290,2303,24,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.95197e-24;MQSB=0.75331;RPB=0.861887;SGB=142.717;VDB=0.43293;EFF=INTRON(MODIFIER||||894|LOC_Os01g23590|protein_coding|CODING|LOC_Os01g23590.1|15|1) FN3837-S.SNP.1:13262285 chr01:013262285 0 W/13262285-13262285 FN3837-S SNP T -> C AC=1;AN=190;BQB=0.287764;DP=3267;DP4=1471,1621,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000257464;MQSB=0.457366;RPB=0.651836;SGB=-3.65821;VDB=0.748814;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.1:13262649 chr01:013262649 0 W/13262649-13262649 FN3551-S SNP C -> T AC=2;AN=188;BQB=0.994474;DP=3447;DP4=1634,1700,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.78459e-20;MQSB=0.983098;RPB=0.299965;SGB=103.307;VDB=0.273369;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.1:13269585 chr01:013269585 0 W/13269585-13269585 FN861-S Single Base Substitution G-T INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN1536-S.SNP.1:13274729 chr01:013274729 0 W/13274729-13274729 FN1536-S Single Base Substitution G-C INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN930-S.SNP.1:13279239 chr01:013279239 0 W/13279239-13279239 FN930-S Single Base Substitution T-C INTRON HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN-121.SNP.1:13288697 chr01:013288697 0 W/13288697-13288697 FN-121 Single Base Substitution A-G INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3676-S.SNP.1:13291033 chr01:013291033 0 W/13291033-13291033 FN3676-S SNP G -> T AC=1;AN=190;BQB=0.94782;DP=2530;DP4=991,1440,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.86398e-08;MQSB=0.75896;RPB=0.999116;SGB=32.5467;VDB=0.693794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.1:13299714 chr01:013299714 0 W/13299714-13299714 FN2174-S SNP A -> C AC=1;AN=168;BQB=0.105074;DP=3943;DP4=2073,1827,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.75959e-07;MQSB=0.513133;RPB=0.949456;SGB=-58.653;VDB=0.532381;EFF=INTRON(MODIFIER||||517|LOC_Os01g23640|protein_coding|CODING|LOC_Os01g23640.1|7|1),INTRON(MODIFIER||||451|LOC_Os01g23640|protein_coding|CODING|LOC_Os01g23640.2|7|1) FN-272.SNP.1:13308103 chr01:013308103 0 W/13308103-13308103 FN-272 Single Base Substitution T-G INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1124-S.SNP.1:13308981 chr01:013308981 0 W/13308981-13308981 FN1124-S Single Base Substitution G-C INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN-403.SNP.1:13309097 chr01:013309097 0 W/13309097-13309097 FN-403 Single Base Substitution T-A INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.1:13309097 chr01:013309097 0 W/13309097-13309097 FN403-S Single Base Substitution T-A INTERGENIC HOMO SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1519-S.SNP.1:13318692 chr01:013318692 0 W/13318692-13318692 FN1519-S Single Base Substitution T-A INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN-195.SNP.1:13319955 chr01:013319955 0 W/13319955-13319955 FN-195 Single Base Substitution G-C INTRON HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN912-S.SNP.1:13322208 chr01:013322208 0 W/13322208-13322208 FN912-S Single Base Substitution C-A INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN912-S.SNP.1:13322210 chr01:013322210 0 W/13322210-13322210 FN912-S Single Base Substitution T-A INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN3533-S.SNP.1:13327919 chr01:013327919 0 W/13327919-13327919 FN3533-S SNP G -> A AC=2;AN=188;BQB=0.997664;DP=3743;DP4=1757,1892,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.52136e-16;MQSB=0.886018;RPB=0.111208;SGB=78.5038;VDB=0.247509;EFF=INTRON(MODIFIER||||155|LOC_Os01g23690|protein_coding|CODING|LOC_Os01g23690.1|2|1) FN959-S.SNP.1:13334067 chr01:013334067 0 W/13334067-13334067 FN959-S Single Base Substitution G-C INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2649-S.SNP.1:13336061 chr01:013336061 0 W/13336061-13336061 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.968298;DP=4978;DP4=2331,2380,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.83591e-10;MQSB=0.905893;RPB=0.826198;SGB=7.88476;VDB=0.935466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.1:13349951 chr01:013349951 0 W/13349951-13349951 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.821421;DP=2869;DP4=1174,1583,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.51372e-07;MQSB=0.638343;RPB=0.187309;SGB=34.0735;VDB=0.428843;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.1:13349971 chr01:013349971 0 W/13349971-13349971 FN439-S Single Base Substitution C-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN428-S.SNP.1:13358277 chr01:013358277 0 W/13358277-13358277 FN428-S Single Base Substitution T-A INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2329.SNP.1:13381726 chr01:013381726 0 W/13381726-13381726 FN2329 SNP T -> A AC=1;AN=192;BQB=0.996367;DP=5349;DP4=2415,2612,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.60474e-12;MQSB=0.187565;RPB=0.488427;SGB=51.9931;VDB=0.502644;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.1:13392014 chr01:013392014 0 W/13392014-13392014 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.965545;DP=2396;DP4=1265,1055,8,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.11703e-11;MQSB=0.996098;RPB=0.994554;SGB=65.6427;VDB=0.13063;EFF=INTRON(MODIFIER||||146|LOC_Os01g23800|protein_coding|CODING|LOC_Os01g23800.1|1|1) FN4279-S.SNP.1:13392015 chr01:013392015 0 W/13392015-13392015 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.981683;DP=2380;DP4=1251,1042,8,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.00214e-10;MQSB=0.999783;RPB=0.999988;SGB=45.206;VDB=0.128717;EFF=INTRON(MODIFIER||||146|LOC_Os01g23800|protein_coding|CODING|LOC_Os01g23800.1|1|1) FN1533-S.SNP.1:13393513 chr01:013393513 0 W/13393513-13393513 FN1533-S Single Base Substitution G-A INTERGENIC Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1533-S.SNP.1:13393515 chr01:013393515 0 W/13393515-13393515 FN1533-S Single Base Substitution G-A INTERGENIC Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN3513-S.SNP.1:13395885 chr01:013395885 0 W/13395885-13395885 FN3513-S SNP A -> C AC=1;AN=188;BQB=0.962512;DP=2804;DP4=1553,1154,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000713267;MQB=7.88802e-05;MQSB=0.534395;RPB=0.539356;SGB=25.3545;VDB=0.273746;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.1:13396404 chr01:013396404 0 W/13396404-13396404 FN920-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g23810 expressed protein SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN_829-2-5.SNP.1:13397993 chr01:013397993 0 W/13397993-13397993 FN_829-2-5 Single Base Substitution G-T Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3844-S.SNP.1:13399696 chr01:013399696 0 W/13399696-13399696 FN3844-S SNP C -> A AC=1;AN=190;BQB=0.980032;DP=2488;DP4=1296,1105,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23805e-05;MQSB=0.997405;RPB=0.1243;SGB=21.8853;VDB=0.314028;EFF=INTERGENIC(MODIFIER||||||||||1) 704-1-1.SNP.1:13402179 chr01:013402179 0 W/13402179-13402179 704-1-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os01g23820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. 704-1-1.SNP.1:13402181 chr01:013402181 0 W/13402181-13402181 704-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g23820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN395-S.SNP.1:13403924 chr01:013403924 0 W/13403924-13403924 FN395-S Single Base Substitution C-A INTERGENIC HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2456.SNP.1:13405165 chr01:013405165 0 W/13405165-13405165 FN2456 SNP T -> C AC=1;AN=200;BQB=0.994741;DP=3836;DP4=2006,1626,7,3;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0409281;MQB=0.47513;MQSB=0.0668242;RPB=0.954049;SGB=25.849;VDB=0.918911;EFF=INTERGENIC(MODIFIER||||||||||1) FN1496-S.SNP.1:13409748 chr01:013409748 0 W/13409748-13409748 FN1496-S Single Base Substitution T-G INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1675-S.SNP.1:13410720 chr01:013410720 0 W/13410720-13410720 FN1675-S SNP G -> A AC=1;AN=188;BQB=0.621789;DP=2122;DP4=951,1102,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.14849e-05;MQSB=0.170734;RPB=0.59644;SGB=-14.9998;VDB=0.291805;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.1:13414082 chr01:013414082 0 W/13414082-13414082 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2199-S.SNP.1:13414829 chr01:013414829 0 W/13414829-13414829 FN2199-S SNP A -> C AC=2;AN=190;BQB=0.993197;DP=5076;DP4=2227,2487,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.23358e-14;MQSB=0.99999;RPB=0.444872;SGB=99.1879;VDB=0.0918874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S76R|212|LOC_Os01g23840|protein_coding|CODING|LOC_Os01g23840.1|3|1) FN2097-S.SNP.1:13416145 chr01:013416145 0 W/13416145-13416145 FN2097-S SNP C -> T AC=1;AN=168;BQB=0.9146;DP=3620;DP4=1612,1985,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000276243;MQB=2.9018e-05;MQSB=0.227047;RPB=0.744732;SGB=-0.101747;VDB=0.740357;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.1:13418289 chr01:013418289 0 W/13418289-13418289 FN1236-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2432.SNP.1:13419978 chr01:013419978 0 W/13419978-13419978 FN2432 SNP A -> T AC=1;AN=200;BQB=0.992742;DP=4931;DP4=2677,1918,17,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00202799;MQB=3.42416e-12;MQSB=6.70222e-05;RPB=0.935391;SGB=104.921;VDB=0.48759;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.1:13421198 chr01:013421198 0 W/13421198-13421198 FN1029-S Single Base Substitution C-G INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1337-S.SNP.1:13424444 chr01:013424444 0 W/13424444-13424444 FN1337-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g23850 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN_841-7-2.SNP.1:13428334 chr01:013428334 0 W/13428334-13428334 FN_841-7-2 Single Base Substitution C-G HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2423.SNP.1:13432934 chr01:013432934 0 W/13432934-13432934 FN2423 SNP A -> T AC=1;AN=200;BQB=0.709895;DP=4772;DP4=2567,1897,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.49513e-09;MQSB=0.92406;RPB=0.940565;SGB=54.6902;VDB=0.800857;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.1:13432934 chr01:013432934 0 W/13432934-13432934 FN3885-S SNP A -> T AC=2;AN=158;BQB=0.999985;DP=2484;DP4=1339,1045,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.0551e-15;MQSB=0.878589;RPB=0.999436;SGB=47.5132;VDB=0.083927;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.1:13433954 chr01:013433954 0 W/13433954-13433954 W138-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3980-S.SNP.1:13444500 chr01:013444500 0 W/13444500-13444500 FN3980-S SNP T -> C AC=2;AN=168;BQB=0.341561;DP=2166;DP4=1096,843,22,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.86363e-11;MQSB=0.960011;RPB=0.237309;SGB=-133.625;VDB=0.858378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D149G|309|LOC_Os01g23890|protein_coding|CODING|LOC_Os01g23890.1|2|1) FN3455-S.SNP.1:13445675 chr01:013445675 0 W/13445675-13445675 FN3455-S SNP A -> G AC=1;AN=184;BQB=0.99107;DP=3086;DP4=1321,1648,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.79062e-06;MQSB=0.856845;RPB=0.873643;SGB=28.7043;VDB=0.816179;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.1:13447419 chr01:013447419 0 W/13447419-13447419 FN1394-S Single Base Substitution A-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2625-S.SNP.1:13452695 chr01:013452695 0 W/13452695-13452695 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.949588;DP=4586;DP4=2103,2166,3,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00457915;MQB=0.000211684;MQSB=0.884773;RPB=0.674659;SGB=54.2646;VDB=0.147087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.1:13452746 chr01:013452746 0 W/13452746-13452746 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.0597085;DP=2636;DP4=1281,1301,7,15;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0110015;MQB=0.620533;MQSB=0.779859;RPB=0.586171;SGB=-13.6493;VDB=0.958424;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.1:13454780 chr01:013454780 0 W/13454780-13454780 FN_814-7-1 Single Base Substitution A-G Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2110-S.SNP.1:13459162 chr01:013459162 0 W/13459162-13459162 FN2110-S SNP G -> A AC=2;AN=168;BQB=0.653693;DP=2582;DP4=1197,1312,16,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.59815e-14;MQSB=0.951096;RPB=0.985635;SGB=-10.2027;VDB=0.392461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1704-S.SNP.1:13467976 chr01:013467976 0 W/13467976-13467976 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.750803;DP=1568;DP4=539,991,10,6;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.000637755;MQB=0.736953;MQSB=2.62149e-18;RPB=0.608402;SGB=26.0762;VDB=0.410408;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.1:13467976 chr01:013467976 0 W/13467976-13467976 FN899-S Single Base Substitution G-A INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN536-S.SNP.1:13470817 chr01:013470817 0 W/13470817-13470817 FN536-S Single Base Substitution A-C INTERGENIC HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN906-S.SNP.1:13471893 chr01:013471893 0 W/13471893-13471893 FN906-S Single Base Substitution C-T INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN-410.SNP.1:13475227 chr01:013475227 0 W/13475227-13475227 FN-410 Single Base Substitution A-C INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-407.SNP.1:13475673 chr01:013475673 0 W/13475673-13475673 FN-407 Single Base Substitution T-C INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN2683-S.SNP.1:13479333 chr01:013479333 0 W/13479333-13479333 FN2683-S SNP G -> T AC=1;AN=200;BQB=0.99113;DP=4800;DP4=2183,2356,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208333;MQB=8.35688e-16;MQSB=0.987596;RPB=0.995768;SGB=94.3471;VDB=0.493351;EFF=INTRON(MODIFIER||||1012|LOC_Os01g23960|protein_coding|CODING|LOC_Os01g23960.1|5|1) FN3867-S.SNP.1:13484601 chr01:013484601 0 W/13484601-13484601 FN3867-S SNP T -> A AC=1;AN=158;BQB=0.953302;DP=2288;DP4=1111,1115,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.58276e-05;MQSB=0.996671;RPB=0.218945;SGB=23.9652;VDB=0.477568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3802-S.SNP.1:13485815 chr01:013485815 0 W/13485815-13485815 FN3802-S SNP G -> T AC=1;AN=190;BQB=0.967636;DP=2892;DP4=1447,1319,4,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.49093e-10;MQSB=0.835395;RPB=0.902875;SGB=57.4238;VDB=0.362211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.1:13489754 chr01:013489754 0 W/13489754-13489754 FN3530-S SNP A -> T AC=1;AN=188;BQB=0.952002;DP=2677;DP4=1395,1203,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40799e-10;MQSB=0.995004;RPB=0.996417;SGB=67.1521;VDB=0.355994;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q349L|423|LOC_Os01g23970|protein_coding|CODING|LOC_Os01g23970.1|3|1) FN2378.SNP.1:13490788 chr01:013490788 0 W/13490788-13490788 FN2378 SNP C -> T AC=1;AN=192;BQB=0.0338349;DP=5195;DP4=2336,2380,19,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.22365e-22;MQSB=0.0796006;RPB=0.165029;SGB=167.883;VDB=0.218037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.1:13490937 chr01:013490937 0 W/13490937-13490937 FN2598-S SNP T -> A AC=1;AN=198;BQB=0.853739;DP=4127;DP4=1849,2113,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.67018e-08;MQSB=0.0243333;RPB=0.177156;SGB=50.9344;VDB=0.546717;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.1:13491682 chr01:013491682 0 W/13491682-13491682 FN4229-S SNP G -> A AC=1;AN=170;BQB=0.937079;DP=1004;DP4=53,909,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000231369;MQSB=0.217753;RPB=0.941502;SGB=5.2284;VDB=0.16689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.1:13497281 chr01:013497281 0 W/13497281-13497281 FN2655-S SNP G -> C AC=1;AN=200;BQB=0.538878;DP=4587;DP4=1968,2409,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218007;MQB=1.15923e-09;MQSB=0.956272;RPB=0.838931;SGB=54.6902;VDB=0.913099;EFF=INTRON(MODIFIER||||1545|LOC_Os01g23980|protein_coding|CODING|LOC_Os01g23980.1|1|1) FN3378-S.SNP.1:13497630 chr01:013497630 0 W/13497630-13497630 FN3378-S SNP G -> A AC=1;AN=184;BQB=0.945003;DP=3122;DP4=1518,1522,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000960923;MQB=1.67402e-09;MQSB=0.285757;RPB=0.953273;SGB=66.8296;VDB=0.192221;EFF=INTRON(MODIFIER||||1545|LOC_Os01g23980|protein_coding|CODING|LOC_Os01g23980.1|1|1) FN2354.SNP.1:13498880 chr01:013498880 0 W/13498880-13498880 FN2354 SNP C -> T AC=1;AN=192;BQB=0.904419;DP=4590;DP4=2123,2175,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.66877e-07;MQSB=0.96996;RPB=0.999092;SGB=1.09742;VDB=0.140581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R547W|1545|LOC_Os01g23980|protein_coding|CODING|LOC_Os01g23980.1|2|1) FN2324.SNP.1:13504064 chr01:013504064 0 W/13504064-13504064 FN2324 SNP G -> A AC=1;AN=192;BQB=0.984624;DP=4178;DP4=1829,1950,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000718047;MQB=1.28349e-05;MQSB=0.778738;RPB=0.318472;SGB=58.3392;VDB=0.103486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.1:13505043 chr01:013505043 0 W/13505043-13505043 FN2553-S SNP A -> G AC=1;AN=198;BQB=0.900426;DP=3904;DP4=1975,1684,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00179303;MQB=1.82154e-07;MQSB=0.999951;RPB=0.855689;SGB=58.1246;VDB=0.903782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.1:13508650 chr01:013508650 0 W/13508650-13508650 FN3301-S SNP C -> A AC=1;AN=184;BQB=0.933647;DP=3259;DP4=1770,1402,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.36391e-07;MQSB=0.514983;RPB=0.398664;SGB=44.2207;VDB=0.507556;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R58|91|LOC_Os01g23990|protein_coding|CODING|LOC_Os01g23990.1|1|1) FN-15.SNP.1:13511670 chr01:013511670 0 W/13511670-13511670 FN-15 Single Base Substitution T-A INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN4082-S.SNP.1:13512383 chr01:013512383 0 W/13512383-13512383 FN4082-S SNP T -> C AC=2;AN=182;BQB=0.994429;DP=3307;DP4=1306,1838,12,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.88563e-15;MQSB=0.999959;RPB=0.240671;SGB=88.2906;VDB=0.274358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.1:13513080 chr01:013513080 0 W/13513080-13513080 FN1536-S Single Base Substitution C-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN577-S.SNP.1:13515397 chr01:013515397 0 W/13515397-13515397 FN577-S Single Base Substitution A-C INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1072-S.SNP.1:13519031 chr01:013519031 0 W/13519031-13519031 FN1072-S Single Base Substitution G-A INTRON HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN-382.SNP.1:13523377 chr01:013523377 0 W/13523377-13523377 FN-382 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24010 pleiotropic drug resistance protein, putative, expressed SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN-170.SNP.1:13528212 chr01:013528212 0 W/13528212-13528212 FN-170 Single Base Substitution T-G INTRON HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN4143-S.SNP.1:13528212 chr01:013528212 0 W/13528212-13528212 FN4143-S SNP T -> G AC=2;AN=170;BQB=0.99836;DP=2504;DP4=1165,1218,9,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.3061e-12;MQSB=0.981751;RPB=0.222281;SGB=55.5339;VDB=0.0687845;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acG|T1432|1451|LOC_Os01g24010|protein_coding|CODING|LOC_Os01g24010.1|23|1),INTRON(MODIFIER||||86|LOC_Os01g24020|protein_coding|CODING|LOC_Os01g24020.1|2|1) FN3358-S.SNP.1:13541564 chr01:013541564 0 W/13541564-13541564 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.893764;DP=2996;DP4=1444,1457,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9344e-05;MQSB=0.192174;RPB=0.937452;SGB=32.2261;VDB=0.413867;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R559|624|LOC_Os01g24030|protein_coding|CODING|LOC_Os01g24030.1|2|1),INTRON(MODIFIER||||510|LOC_Os01g24030|protein_coding|CODING|LOC_Os01g24030.2|2|1) FN2661-S.SNP.1:13545895 chr01:013545895 0 W/13545895-13545895 FN2661-S SNP A -> G AC=1;AN=200;BQB=0.49313;DP=5052;DP4=2514,2262,23,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00950119;MQB=8.42285e-05;MQSB=0.00419389;RPB=0.409871;SGB=68.5625;VDB=0.637065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D528G|773|LOC_Os01g24040|protein_coding|CODING|LOC_Os01g24040.1|4|1) FN722-S.SNP.1:13552365 chr01:013552365 0 W/13552365-13552365 FN722-S Single Base Substitution C-T INTRON HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN3817-S.SNP.1:13555566 chr01:013555566 0 W/13555566-13555566 FN3817-S SNP T -> C AC=1;AN=190;BQB=0.983404;DP=2727;DP4=1359,1258,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000224333;MQSB=0.982103;RPB=0.962113;SGB=21.7749;VDB=0.582158;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I320|737|LOC_Os01g24050|protein_coding|CODING|LOC_Os01g24050.1|2|1) FN3949-S.SNP.1:13561897 chr01:013561897 0 W/13561897-13561897 FN3949-S SNP T -> C AC=2;AN=168;BQB=0.44853;DP=2358;DP4=1186,994,14,8;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00254453;MQB=4.50745e-07;MQSB=0.0112693;RPB=0.439283;SGB=65.6253;VDB=0.0567232;EFF=INTRON(MODIFIER||||564|LOC_Os01g24060|protein_coding|CODING|LOC_Os01g24060.1|2|1),INTRON(MODIFIER||||533|LOC_Os01g24060|protein_coding|CODING|LOC_Os01g24060.2|2|1) FN2542-S.SNP.1:13563200 chr01:013563200 0 W/13563200-13563200 FN2542-S SNP T -> A AC=2;AN=198;BQB=0.859476;DP=4454;DP4=1870,2325,18,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000224517;MQB=7.11164e-23;MQSB=0.973011;RPB=0.633355;SGB=107.198;VDB=0.129093;EFF=INTRON(MODIFIER||||564|LOC_Os01g24060|protein_coding|CODING|LOC_Os01g24060.1|4|1),INTRON(MODIFIER||||533|LOC_Os01g24060|protein_coding|CODING|LOC_Os01g24060.2|4|1) FN3343-S.SNP.1:13569818 chr01:013569818 0 W/13569818-13569818 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.948866;DP=2989;DP4=1356,1468,3,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.66695e-11;MQSB=0.942578;RPB=0.991995;SGB=28.3187;VDB=0.765862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.1:13574724 chr01:013574724 0 W/13574724-13574724 FN3325-S SNP T -> A AC=1;AN=184;BQB=0.875694;DP=3088;DP4=1614,1357,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13977e-06;MQSB=0.912825;RPB=0.405456;SGB=39.699;VDB=0.977905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.1:13575968 chr01:013575968 0 W/13575968-13575968 FN1446-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1414-S.SNP.1:13583014 chr01:013583014 0 W/13583014-13583014 FN1414-S Single Base Substitution A-C INTRON HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2482.SNP.1:13588565 chr01:013588565 0 W/13588565-13588565 FN2482 SNP T -> C AC=1;AN=200;BQB=0.59801;DP=4823;DP4=2113,2390,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.31053e-07;MQSB=0.920111;RPB=0.984793;SGB=40.4492;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.1:13589883 chr01:013589883 0 W/13589883-13589883 FN431-S Single Base Substitution G-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN-298.SNP.1:13589995 chr01:013589995 0 W/13589995-13589995 FN-298 Single Base Substitution T-C INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN775-S.SNP.1:13593840 chr01:013593840 0 W/13593840-13593840 FN775-S Single Base Substitution A-T INTERGENIC HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3890-S.SNP.1:13598654 chr01:013598654 0 W/13598654-13598654 FN3890-S SNP C -> T AC=1;AN=158;BQB=0.864177;DP=1719;DP4=608,974,14,13;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.00756254;MQB=0.368422;MQSB=2.11485e-06;RPB=0.679115;SGB=112.609;VDB=0.577936;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.1:13603370 chr01:013603370 0 W/13603370-13603370 FN3681-S SNP T -> C AC=1;AN=190;BQB=0.76864;DP=2220;DP4=849,1229,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.4926e-11;MQSB=0.997784;RPB=0.311859;SGB=50.3161;VDB=0.593184;EFF=INTRON(MODIFIER||||458|LOC_Os01g24130|protein_coding|CODING|LOC_Os01g24130.1|1|1) FN2222-S.SNP.1:13604706 chr01:013604706 0 W/13604706-13604706 FN2222-S SNP C -> A AC=1;AN=190;BQB=0.120032;DP=5175;DP4=2420,2332,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193237;MQB=4.71134e-13;MQSB=0.119682;RPB=0.423634;SGB=-6.57546;VDB=0.529446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.1:13608286 chr01:013608286 0 W/13608286-13608286 FN3732-S SNP T -> C AC=1;AN=190;BQB=0.216357;DP=2614;DP4=1107,1331,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00257077;MQSB=0.0800532;RPB=0.147453;SGB=-3.65821;VDB=0.515534;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.1:13613325 chr01:013613325 0 W/13613325-13613325 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.995046;DP=2914;DP4=1359,1451,14,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.11218e-20;MQSB=0.979356;RPB=0.197015;SGB=66.1455;VDB=0.671773;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N279|769|LOC_Os01g24140|protein_coding|CODING|LOC_Os01g24140.1|2|1) FN888-S.SNP.1:13617246 chr01:013617246 0 W/13617246-13617246 FN888-S Single Base Substitution T-C INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN729-S.SNP.1:13624563 chr01:013624563 0 W/13624563-13624563 FN729-S Single Base Substitution C-A INTRON HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN973-S.SNP.1:13628531 chr01:013628531 0 W/13628531-13628531 FN973-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24180 retrotransposon protein, putative, unclassified SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2222-S.SNP.1:13629528 chr01:013629528 0 W/13629528-13629528 FN2222-S SNP A -> G AC=1;AN=190;BQB=0.303981;DP=5008;DP4=2451,2174,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000399361;MQB=6.15057e-13;MQSB=0.913932;RPB=0.165302;SGB=-42.1241;VDB=0.0965838;EFF=INTRON(MODIFIER||||660|LOC_Os01g24180|protein_coding|CODING|LOC_Os01g24180.1|2|1) FN2429.SNP.1:13634847 chr01:013634847 0 W/13634847-13634847 FN2429 SNP T -> C AC=2;AN=200;BQB=0.917518;DP=4564;DP4=1670,2497,22,14;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.356924;MQB=0.0802337;MQSB=0;RPB=0.554526;SGB=78.9831;VDB=0.380318;EFF=INTERGENIC(MODIFIER||||||||||1) FN967-S.SNP.1:13639636 chr01:013639636 0 W/13639636-13639636 FN967-S Single Base Substitution A-G INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2614-S.SNP.1:13640158 chr01:013640158 0 W/13640158-13640158 FN2614-S SNP C -> G AC=1;AN=198;BQB=0.558204;DP=3806;DP4=1610,1973,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8027e-12;MQSB=0.679082;RPB=0.999292;SGB=65.3149;VDB=0.986533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.1:13642546 chr01:013642546 0 W/13642546-13642546 FN1484-S Single Base Substitution T-C INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN598-S.SNP.1:13649638 chr01:013649638 0 W/13649638-13649638 FN598-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g24220 retrotransposon protein, putative, Ty1-copia subclass SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN961-S.SNP.1:13655503 chr01:013655503 0 W/13655503-13655503 FN961-S Single Base Substitution C-G INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-137.SNP.1:13655777 chr01:013655777 0 W/13655777-13655777 FN-137 Single Base Substitution G-C INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2330.SNP.1:13656779 chr01:013656779 0 W/13656779-13656779 FN2330 SNP G -> T AC=1;AN=192;BQB=0.0567111;DP=5089;DP4=2297,2418,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.78201e-10;MQSB=0.982863;RPB=0.739937;SGB=-37.9417;VDB=0.776591;EFF=INTRON(MODIFIER||||136|LOC_Os01g24230|protein_coding|CODING|LOC_Os01g24230.1|1|1) FN2631-S.SNP.1:13669555 chr01:013669555 0 W/13669555-13669555 FN2631-S SNP T -> C AC=1;AN=200;BQB=0.920852;DP=4733;DP4=2131,2310,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00190154;MQB=1.01229e-10;MQSB=0.573435;RPB=0.525682;SGB=9.48993;VDB=0.239262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T84A|293|LOC_Os01g24260|protein_coding|CODING|LOC_Os01g24260.1|3|1) FN2486.SNP.1:13672164 chr01:013672164 0 W/13672164-13672164 FN2486 SNP G -> A AC=1;AN=200;BQB=0.515283;DP=4414;DP4=2179,2024,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.75227e-06;MQSB=0.82598;RPB=0.997533;SGB=36.6644;VDB=0.673381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R10H|158|LOC_Os01g24270|protein_coding|CODING|LOC_Os01g24270.1|1|1) FN3376-S.SNP.1:13672776 chr01:013672776 0 W/13672776-13672776 FN3376-S SNP C -> T AC=2;AN=184;BQB=0.443816;DP=2757;DP4=1210,1425,23,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.07503e-16;MQSB=0.994213;RPB=0.49189;SGB=179.874;VDB=0.427418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.1:13675694 chr01:013675694 0 W/13675694-13675694 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.854287;DP=4257;DP4=2131,1897,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.65675e-11;MQSB=0.992259;RPB=0.605674;SGB=-10.2651;VDB=0.279289;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.1:13676223 chr01:013676223 0 W/13676223-13676223 FN-361 Single Base Substitution G-C INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN224-S.SNP.1:13676812 chr01:013676812 0 W/13676812-13676812 FN224-S Single Base Substitution T-C INTERGENIC HOMO SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1559-S.SNP.1:13683846 chr01:013683846 0 W/13683846-13683846 FN1559-S Single Base Substitution A-T INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN-259.SNP.1:13687536 chr01:013687536 0 W/13687536-13687536 FN-259 Single Base Substitution T-G INTRON HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN1123-S.SNP.1:13688096 chr01:013688096 0 W/13688096-13688096 FN1123-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g24294 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2410.SNP.1:13688096 chr01:013688096 0 W/13688096-13688096 FN2410 SNP C -> T AC=2;AN=200;BQB=0.985316;DP=3827;DP4=1797,1792,30,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000522603;MQB=9.25691e-26;MQSB=0.972704;RPB=0.952321;SGB=177.266;VDB=0.77073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1439T|1742|LOC_Os01g24294|protein_coding|CODING|LOC_Os01g24294.1|8|1) FN3341-S.SNP.1:13688096 chr01:013688096 0 W/13688096-13688096 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.725906;DP=2494;DP4=1107,1282,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000801925;MQB=7.03773e-14;MQSB=0.67819;RPB=0.911614;SGB=107.526;VDB=0.273232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1439T|1742|LOC_Os01g24294|protein_coding|CODING|LOC_Os01g24294.1|8|1) FN504-S.SNP.1:13690112 chr01:013690112 0 W/13690112-13690112 FN504-S Single Base Substitution G-A INTRON HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN4189-S.SNP.1:13695842 chr01:013695842 0 W/13695842-13695842 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.966956;DP=2359;DP4=1065,1215,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.000847817;MQB=0.0152677;MQSB=0.369906;RPB=0.983948;SGB=34.5445;VDB=0.633718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.1:13696275 chr01:013696275 0 W/13696275-13696275 FN3477-S SNP G -> C AC=1;AN=184;BQB=0.903436;DP=2339;DP4=1101,1095,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0401881;MQB=0.0686518;MQSB=0.00177656;RPB=0.704722;SGB=-15.7576;VDB=0.708615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.1:13702711 chr01:013702711 0 W/13702711-13702711 FN2242-S SNP C -> G AC=1;AN=190;BQB=0.997838;DP=4972;DP4=2157,2431,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.70371e-13;MQSB=0.530118;RPB=0.994415;SGB=44.0907;VDB=0.29547;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.1:13709425 chr01:013709425 0 W/13709425-13709425 FN244-S Single Base Substitution A-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2332.SNP.1:13712794 chr01:013712794 0 W/13712794-13712794 FN2332 SNP C -> T AC=1;AN=192;BQB=0.654308;DP=5389;DP4=2381,2601,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.00839e-16;MQSB=0.871037;RPB=0.962616;SGB=-41.8626;VDB=0.82885;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.1:13719910 chr01:013719910 0 W/13719910-13719910 FN494-S Single Base Substitution T-C INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1335-S.SNP.1:13720338 chr01:013720338 0 W/13720338-13720338 FN1335-S Single Base Substitution C-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1033-S.SNP.1:13722673 chr01:013722673 0 W/13722673-13722673 FN1033-S Single Base Substitution A-C INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1561-S.SNP.1:13723501 chr01:013723501 0 W/13723501-13723501 FN1561-S Single Base Substitution G-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN710-S.SNP.1:13723886 chr01:013723886 0 W/13723886-13723886 FN710-S Single Base Substitution C-T INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN-161.SNP.1:13724468 chr01:013724468 0 W/13724468-13724468 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2081-S.SNP.1:13725556 chr01:013725556 0 W/13725556-13725556 FN2081-S SNP C -> T AC=1;AN=168;BQB=0.42812;DP=3330;DP4=1671,1585,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18297e-11;MQSB=0.953813;RPB=0.986544;SGB=56.2162;VDB=0.0819504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.1:13727742 chr01:013727742 0 W/13727742-13727742 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.987594;DP=2564;DP4=1217,1254,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15928e-08;MQSB=0.942476;RPB=0.780029;SGB=39.6545;VDB=0.858666;EFF=SPLICE_SITE_REGION(LOW||||358|LOC_Os01g24360|protein_coding|CODING|LOC_Os01g24360.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A291|358|LOC_Os01g24360|protein_coding|CODING|LOC_Os01g24360.1|6|1) FN2535-S.SNP.1:13730501 chr01:013730501 0 W/13730501-13730501 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.30162;DP=5310;DP4=2023,3028,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.104143;MQB=0.00915768;MQSB=6.63933e-20;RPB=0.807494;SGB=21.559;VDB=0.14593;EFF=INTRON(MODIFIER||||358|LOC_Os01g24360|protein_coding|CODING|LOC_Os01g24360.1|3|1) FN3814-S.SNP.1:13732341 chr01:013732341 0 W/13732341-13732341 FN3814-S SNP G -> C AC=1;AN=190;BQB=0.990576;DP=2645;DP4=1299,1256,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00113422;MQB=6.27713e-06;MQSB=0.0813255;RPB=0.991178;SGB=32.5467;VDB=0.0822834;EFF=INTERGENIC(MODIFIER||||||||||1) FN1493-S.SNP.1:13733067 chr01:013733067 0 W/13733067-13733067 FN1493-S Single Base Substitution G-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3567-S.SNP.1:13739207 chr01:013739207 0 W/13739207-13739207 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.898833;DP=3411;DP4=1824,1478,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.364116;MQB=0.30522;MQSB=6.3874e-41;RPB=0.183633;SGB=82.0471;VDB=0.434043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.1:13747342 chr01:013747342 0 W/13747342-13747342 FN3426-S SNP A -> G AC=1;AN=184;BQB=0.663024;DP=2915;DP4=1655,1143,11,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000497624;MQSB=0.000345816;RPB=0.900057;SGB=48.7425;VDB=0.0195283;EFF=STOP_LOST(HIGH|MISSENSE|Tga/Cga|*298R|297|LOC_Os01g24390|protein_coding|CODING|LOC_Os01g24390.1|3|1) FN1702-S.SNP.1:13747885 chr01:013747885 0 W/13747885-13747885 FN1702-S SNP T -> G AC=1;AN=188;BQB=0.0226142;DP=2512;DP4=1234,1224,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.31709e-07;MQSB=0.996583;RPB=0.185652;SGB=-83.9838;VDB=0.0733656;EFF=INTRON(MODIFIER||||297|LOC_Os01g24390|protein_coding|CODING|LOC_Os01g24390.1|2|1) FN504-S.SNP.1:13748977 chr01:013748977 0 W/13748977-13748977 FN504-S Single Base Substitution C-T INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3295-S.SNP.1:13752762 chr01:013752762 0 W/13752762-13752762 FN3295-S SNP C -> A AC=1;AN=184;BQB=0.967155;DP=2950;DP4=1404,1388,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.21763e-05;MQSB=0.000583402;RPB=0.938812;SGB=39.699;VDB=0.587338;EFF=INTERGENIC(MODIFIER||||||||||1) FN1070-S.SNP.1:13753805 chr01:013753805 0 W/13753805-13753805 FN1070-S Single Base Substitution G-A STOP_GAINED HET LOC_Os01g24400 retrotransposon protein, putative, unclassified, expressed SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN596-S.SNP.1:13754301 chr01:013754301 0 W/13754301-13754301 FN596-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g24400 retrotransposon protein, putative, unclassified, expressed SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN887-S.SNP.1:13754306 chr01:013754306 0 W/13754306-13754306 FN887-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24400 retrotransposon protein, putative, unclassified, expressed SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2532-S.SNP.1:13754678 chr01:013754678 0 W/13754678-13754678 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.652553;DP=5411;DP4=2718,2380,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.07725;MQB=0.22494;MQSB=0.1609;RPB=0.316953;SGB=86.8856;VDB=0.782166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1137T|1527|LOC_Os01g24400|protein_coding|CODING|LOC_Os01g24400.1|4|1) FN355-S.SNP.1:13754804 chr01:013754804 0 W/13754804-13754804 FN355-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g24400 retrotransposon protein, putative, unclassified, expressed SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN939-S.SNP.1:13762378 chr01:013762378 0 W/13762378-13762378 FN939-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24410 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. W470-2-1.SNP.1:13763426 chr01:013763426 0 W/13763426-13763426 W470-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1310-S.SNP.1:13764401 chr01:013764401 0 W/13764401-13764401 FN1310-S Single Base Substitution C-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1222-S.SNP.1:13772892 chr01:013772892 0 W/13772892-13772892 FN1222-S Single Base Substitution T-G INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN-409.SNP.1:13780507 chr01:013780507 0 W/13780507-13780507 FN-409 Single Base Substitution T-C INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-409.SNP.1:13780513 chr01:013780513 0 W/13780513-13780513 FN-409 Single Base Substitution A-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-406.SNP.1:13783069 chr01:013783069 0 W/13783069-13783069 FN-406 Single Base Substitution G-A INTERGENIC HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2668-S.SNP.1:13784679 chr01:013784679 0 W/13784679-13784679 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.784776;DP=4414;DP4=1955,2206,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.04176e-16;MQSB=0.843265;RPB=0.901352;SGB=114.132;VDB=0.0463437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.1:13800947 chr01:013800947 0 W/13800947-13800947 FN2330 SNP C -> T AC=1;AN=192;BQB=0.94884;DP=4763;DP4=2358,2189,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.16752e-13;MQSB=0.845832;RPB=0.900086;SGB=44.3;VDB=0.830188;EFF=UTR_3_PRIME(MODIFIER||270||495|LOC_Os01g24480|protein_coding|CODING|LOC_Os01g24480.1|6|1) FN2530-S.SNP.1:13806447 chr01:013806447 0 W/13806447-13806447 FN2530-S SNP T -> A AC=1;AN=198;BQB=0.601769;DP=3784;DP4=2047,1514,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000264271;MQB=7.55918e-06;MQSB=0.000871422;RPB=0.88725;SGB=32.9588;VDB=0.713589;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.1:13807087 chr01:013807087 0 W/13807087-13807087 FN441-S Single Base Substitution C-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN378-S.SNP.1:13807116 chr01:013807116 0 W/13807116-13807116 FN378-S Single Base Substitution G-T INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN75-S-43.SNP.1:13809681 chr01:013809681 0 W/13809681-13809681 FN75-S-43 SNP G -> C AC=1;AN=190;BQB=0.216279;DP=4852;DP4=2210,2303,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.51552e-13;MQSB=0.677066;RPB=0.988741;SGB=27.4193;VDB=0.848772;EFF=UTR_5_PRIME(MODIFIER||37||494|LOC_Os01g24490|protein_coding|CODING|LOC_Os01g24490.1|1|1) FN3821-S.SNP.1:13810213 chr01:013810213 0 W/13810213-13810213 FN3821-S SNP A -> G AC=2;AN=190;BQB=0.749604;DP=2601;DP4=1277,1228,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.67376e-14;MQSB=0.759494;RPB=0.501629;SGB=51.7524;VDB=0.734739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.1:13814017 chr01:013814017 0 W/13814017-13814017 FN1750-S SNP T -> C AC=1;AN=188;BQB=0.00775788;DP=3524;DP4=1476,1953,16,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.24722e-11;MQSB=0.986393;RPB=0.706964;SGB=-428.427;VDB=0.945839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.1:13814695 chr01:013814695 0 W/13814695-13814695 FN3817-S SNP A -> T AC=1;AN=190;BQB=0.695787;DP=2821;DP4=1281,1460,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.48649e-06;MQSB=0.863432;RPB=0.571471;SGB=58.2031;VDB=0.247361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.1:13815951 chr01:013815951 0 W/13815951-13815951 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.326047;DP=4925;DP4=2396,2299,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08251e-17;MQSB=0.992302;RPB=0.808808;SGB=-39.2639;VDB=0.540478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N77K|447|LOC_Os01g24500|protein_coding|CODING|LOC_Os01g24500.1|3|1) FN-93.SNP.1:13818533 chr01:013818533 0 W/13818533-13818533 FN-93 Single Base Substitution C-A INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN542-S.SNP.1:13820276 chr01:013820276 0 W/13820276-13820276 FN542-S Single Base Substitution A-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN502-S.SNP.1:13823576 chr01:013823576 0 W/13823576-13823576 FN502-S Single Base Substitution A-G INTRON HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN_815-4-1.SNP.1:13827129 chr01:013827129 0 W/13827129-13827129 FN_815-4-1 Single Base Substitution A-T HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN4224-S.SNP.1:13830483 chr01:013830483 0 W/13830483-13830483 FN4224-S SNP C -> A AC=2;AN=170;BQB=0.974467;DP=1003;DP4=558,405,10,2;HOB=0.0232526;ICB=0.494188;MQ=29;MQ0F=0.0997009;MQB=0.574639;MQSB=0;RPB=0.840506;SGB=14.9986;VDB=0.00453638;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G113|512|LOC_Os01g24530|protein_coding|CODING|LOC_Os01g24530.1|1|1) FN4255-S.SNP.1:13835379 chr01:013835379 0 W/13835379-13835379 FN4255-S SNP T -> C AC=1;AN=170;BQB=0.866064;DP=2668;DP4=1407,1184,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=16;MQ0F=0.389805;MQB=0.0370987;MQSB=1.18504e-13;RPB=0.99964;SGB=74.528;VDB=0.911961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q16R|972|LOC_Os01g24540|protein_coding|CODING|LOC_Os01g24540.1|1|1) FN2386.SNP.1:13844400 chr01:013844400 0 W/13844400-13844400 FN2386 SNP G -> T AC=1;AN=192;BQB=0.85754;DP=4992;DP4=2213,2378,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.84093e-10;MQSB=0.985817;RPB=0.939081;SGB=41.7357;VDB=0.188231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.1:13848205 chr01:013848205 0 W/13848205-13848205 FN3829-S SNP C -> A AC=1;AN=190;BQB=0.801415;DP=3402;DP4=1975,1309,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00440917;MQB=4.23488e-06;MQSB=1.32706e-10;RPB=0.99987;SGB=31.3213;VDB=0.880155;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G249|319|LOC_Os01g24570|protein_coding|CODING|LOC_Os01g24570.1|2|1) FN1515-S.SNP.1:13850172 chr01:013850172 0 W/13850172-13850172 FN1515-S Single Base Substitution C-A INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2157-S.SNP.1:13850172 chr01:013850172 0 W/13850172-13850172 FN2157-S SNP C -> A AC=2;AN=168;BQB=0.759662;DP=2926;DP4=701,2177,3,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.74622e-13;MQSB=0.942436;RPB=0.60273;SGB=-11.0644;VDB=0.684395;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.1:13850172 chr01:013850172 0 W/13850172-13850172 FN3872-S SNP C -> A AC=1;AN=158;BQB=0.952891;DP=1684;DP4=661,943,1,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.1095e-05;MQSB=0.994416;RPB=0.705276;SGB=29.5899;VDB=0.696057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.1:13850172 chr01:013850172 0 W/13850172-13850172 FN3971-S SNP C -> A AC=1;AN=168;BQB=0.893656;DP=1585;DP4=502,1011,2,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00625714;MQSB=0.73322;RPB=0.829342;SGB=21.16;VDB=0.208285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.1:13853004 chr01:013853004 0 W/13853004-13853004 FN1416-S Single Base Substitution T-G INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-159.SNP.1:13853072 chr01:013853072 0 W/13853072-13853072 FN-159 Single Base Substitution G-A INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3778-S.SNP.1:13853408 chr01:013853408 0 W/13853408-13853408 FN3778-S SNP A -> T AC=1;AN=190;BQB=0.870268;DP=2622;DP4=1203,1283,1,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00017354;MQSB=0.988533;RPB=0.851953;SGB=39.9877;VDB=0.350065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.1:13863189 chr01:013863189 0 W/13863189-13863189 FN1711-S SNP G -> A AC=1;AN=188;BQB=0.412083;DP=2314;DP4=1093,1184,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.309421;MQB=0.633789;MQSB=0;RPB=0.036193;SGB=-79.0704;VDB=0.129542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:13863354 chr01:013863354 0 W/13863354-13863354 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.907836;DP=4183;DP4=2129,1835,15,9;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.336601;MQB=0.747534;MQSB=0.694579;RPB=0.0930987;SGB=104.921;VDB=0.646346;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.1:13878753 chr01:013878753 0 W/13878753-13878753 FN-335 Single Base Substitution C-T INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN995-S.SNP.1:13881301 chr01:013881301 0 W/13881301-13881301 FN995-S Single Base Substitution T-C INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1293-S.SNP.1:13885855 chr01:013885855 0 W/13885855-13885855 FN1293-S Single Base Substitution A-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1344-S.SNP.1:13893440 chr01:013893440 0 W/13893440-13893440 FN1344-S Single Base Substitution A-C INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1368-S.SNP.1:13905868 chr01:013905868 0 W/13905868-13905868 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2696-S.SNP.1:13907033 chr01:013907033 0 W/13907033-13907033 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.534988;DP=4940;DP4=2272,2305,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.91622e-13;MQSB=0.521583;RPB=0.686377;SGB=91.1059;VDB=0.613474;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.1:13908269 chr01:013908269 0 W/13908269-13908269 FN4133-S SNP A -> G AC=2;AN=182;BQB=0.988227;DP=2863;DP4=1491,1310,10,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.2168e-13;MQSB=0.983248;RPB=0.476248;SGB=89.2199;VDB=0.0624997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.1:13915089 chr01:013915089 0 W/13915089-13915089 FN1196-S Single Base Substitution C-T INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN-104.SNP.1:13916769 chr01:013916769 0 W/13916769-13916769 FN-104 Single Base Substitution G-C INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1571-S.SNP.1:13916769 chr01:013916769 0 W/13916769-13916769 FN1571-S Single Base Substitution G-C INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2578-S.SNP.1:13916769 chr01:013916769 0 W/13916769-13916769 FN2578-S SNP G -> C AC=2;AN=198;BQB=0.964183;DP=4185;DP4=1920,1874,10,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.15196e-09;MQSB=0.997387;RPB=0.649358;SGB=90.9049;VDB=0.131017;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.1:13916769 chr01:013916769 0 W/13916769-13916769 FN4046-S SNP G -> C AC=1;AN=168;BQB=0.991628;DP=3076;DP4=1369,1558,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06542e-08;MQSB=0.998524;RPB=0.686719;SGB=56.6036;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.1:13932770 chr01:013932770 0 W/13932770-13932770 FN-368 Single Base Substitution T-A INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3974-S.SNP.1:13935348 chr01:013935348 0 W/13935348-13935348 FN3974-S SNP T -> C AC=2;AN=168;BQB=0.857834;DP=2622;DP4=1288,1143,23,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.42976e-20;MQSB=0.991041;RPB=0.523763;SGB=154.082;VDB=0.156285;EFF=UTR_3_PRIME(MODIFIER||267||72|LOC_Os01g24764|protein_coding|CODING|LOC_Os01g24764.1|1|1) FN2628-S.SNP.1:13942293 chr01:013942293 0 W/13942293-13942293 FN2628-S SNP A -> C AC=1;AN=200;BQB=0.646651;DP=4572;DP4=2384,1981,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.65265e-14;MQSB=0.925721;RPB=0.604408;SGB=-8.26887;VDB=0.0376366;EFF=INTRON(MODIFIER||||523|LOC_Os01g24780|protein_coding|CODING|LOC_Os01g24780.1|2|1) FN1295-S.SNP.1:13950226 chr01:013950226 0 W/13950226-13950226 FN1295-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN417-S.SNP.1:13951429 chr01:013951429 0 W/13951429-13951429 FN417-S Single Base Substitution C-T INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1204-S.SNP.1:13953937 chr01:013953937 0 W/13953937-13953937 FN1204-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1173-S.SNP.1:13963039 chr01:013963039 0 W/13963039-13963039 FN1173-S Single Base Substitution G-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2395.SNP.1:13963537 chr01:013963537 0 W/13963537-13963537 FN2395 SNP A -> C AC=2;AN=200;BQB=0.919481;DP=3737;DP4=1573,1859,19,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000267594;MQB=7.17153e-22;MQSB=0.999099;RPB=0.970664;SGB=144.819;VDB=0.21459;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.1:13965253 chr01:013965253 0 W/13965253-13965253 FN3427-S SNP A -> G AC=1;AN=184;BQB=0.935828;DP=2962;DP4=1297,1549,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0124916;MQB=0.0338211;MQSB=2.8163e-07;RPB=0.861501;SGB=44.2207;VDB=0.873154;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S195|864|LOC_Os01g24800|protein_coding|CODING|LOC_Os01g24800.1|1|1) FN3110-S.SNP.1:13976638 chr01:013976638 0 W/13976638-13976638 FN3110-S SNP G -> A AC=1;AN=184;BQB=0.745729;DP=3262;DP4=1338,1676,16,15;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00735745;MQB=1.68604e-06;MQSB=0.719182;RPB=0.0622561;SGB=-42.9253;VDB=0.228314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.1:13977678 chr01:013977678 0 W/13977678-13977678 FN4258-S SNP C -> G AC=1;AN=170;BQB=0.742141;DP=2065;DP4=859,1150,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.48193e-06;MQSB=0.825613;RPB=0.249982;SGB=17.4413;VDB=0.214563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN-117 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g24830 expressed protein SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN1062-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN1062-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24830 expressed protein SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2177-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN2177-S SNP C -> T AC=2;AN=168;BQB=0.89599;DP=2235;DP4=780,1403,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.95371e-14;MQSB=0.853245;RPB=0.994145;SGB=75.9177;VDB=0.490793;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A37V|197|LOC_Os01g24830|protein_coding|CODING|LOC_Os01g24830.1|1|1) FN2212-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.157377;DP=4281;DP4=1935,2092,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20074e-06;MQSB=0.998476;RPB=0.94925;SGB=62.7569;VDB=0.556976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A37V|197|LOC_Os01g24830|protein_coding|CODING|LOC_Os01g24830.1|1|1) FN2475.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN2475 SNP C -> T AC=1;AN=200;BQB=0.610443;DP=4625;DP4=2145,2256,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.57042e-08;MQSB=0.963656;RPB=0.526261;SGB=40.2696;VDB=0.0714772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A37V|197|LOC_Os01g24830|protein_coding|CODING|LOC_Os01g24830.1|1|1) FN3567-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN3567-S SNP C -> T AC=2;AN=188;BQB=0.974089;DP=3778;DP4=2087,1600,27,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.07024e-24;MQSB=0.832564;RPB=0.488296;SGB=180.734;VDB=0.964415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A37V|197|LOC_Os01g24830|protein_coding|CODING|LOC_Os01g24830.1|1|1) FN4279-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN4279-S SNP C -> T AC=2;AN=170;BQB=0.77095;DP=2710;DP4=1414,1227,8,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.45072e-10;MQSB=0.964339;RPB=0.846146;SGB=92.2986;VDB=0.90356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A37V|197|LOC_Os01g24830|protein_coding|CODING|LOC_Os01g24830.1|1|1) FN507-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN507-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g24830 expressed protein SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN779-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN779-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g24830 expressed protein SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN835-S.SNP.1:13985196 chr01:013985196 0 W/13985196-13985196 FN835-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g24830 expressed protein SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2531-S.SNP.1:13987804 chr01:013987804 0 W/13987804-13987804 FN2531-S SNP T -> A AC=2;AN=198;BQB=0.456848;DP=4242;DP4=2012,1974,13,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.8665e-10;MQSB=0.998715;RPB=0.98238;SGB=14.1348;VDB=0.803254;EFF=INTRON(MODIFIER||||218|LOC_Os01g24840|protein_coding|CODING|LOC_Os01g24840.1|2|1) FN3541-S.SNP.1:13992440 chr01:013992440 0 W/13992440-13992440 FN3541-S SNP T -> A AC=1;AN=188;BQB=0.739565;DP=2716;DP4=1253,1385,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000134888;MQSB=0.954097;RPB=0.359251;SGB=-3.72151;VDB=0.470677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.1:13993148 chr01:013993148 0 W/13993148-13993148 FN1446-S Single Base Substitution A-G INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2554-S.SNP.1:13993974 chr01:013993974 0 W/13993974-13993974 FN2554-S SNP C -> G AC=1;AN=198;BQB=0.977125;DP=3961;DP4=1762,1943,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000252461;MQB=8.37774e-13;MQSB=0.949641;RPB=0.268054;SGB=18.9201;VDB=0.479135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.1:13995680 chr01:013995680 0 W/13995680-13995680 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.560216;DP=3088;DP4=1581,1378,16,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42779e-09;MQSB=0.88671;RPB=0.903294;SGB=64.5316;VDB=0.546168;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.1:13997455 chr01:013997455 0 W/13997455-13997455 FN831-S Single Base Substitution T-G INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2617-S.SNP.1:14002046 chr01:014002046 0 W/14002046-14002046 FN2617-S SNP C -> A AC=1;AN=198;BQB=0.937437;DP=4040;DP4=1989,1854,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00321782;MQB=7.2643e-11;MQSB=0.602478;RPB=0.166437;SGB=83.2905;VDB=0.0916051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H909N|1463|LOC_Os01g24860|protein_coding|CODING|LOC_Os01g24860.1|5|1) FN-81.SNP.1:14004677 chr01:014004677 0 W/14004677-14004677 FN-81 Single Base Substitution G-A INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN3837-S.SNP.1:14004891 chr01:014004891 0 W/14004891-14004891 FN3837-S SNP G -> A AC=1;AN=190;BQB=0.886698;DP=2364;DP4=1243,1005,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000231035;MQSB=0.587359;RPB=0.28219;SGB=26.3271;VDB=0.319019;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.1:14005459 chr01:014005459 0 W/14005459-14005459 FN4023-S SNP G -> A AC=1;AN=168;BQB=0.084839;DP=2462;DP4=1225,1151,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000355651;MQSB=0.730565;RPB=0.559265;SGB=41.6096;VDB=0.752727;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D41N|495|LOC_Os01g24870|protein_coding|CODING|LOC_Os01g24870.1|2|1) FN2305.SNP.1:14006426 chr01:014006426 0 W/14006426-14006426 FN2305 SNP A -> T AC=1;AN=192;BQB=0.917408;DP=4805;DP4=2233,2294,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208117;MQB=7.43654e-05;MQSB=0.452689;RPB=0.979265;SGB=25.5227;VDB=0.508631;EFF=INTRON(MODIFIER||||495|LOC_Os01g24870|protein_coding|CODING|LOC_Os01g24870.1|2|1) FN2765-S.SNP.1:14016053 chr01:014016053 0 W/14016053-14016053 FN2765-S SNP T -> A AC=2;AN=198;BQB=0.851662;DP=3896;DP4=1880,1839,19,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.8182e-22;MQSB=0.850783;RPB=0.804124;SGB=164.427;VDB=0.747527;EFF=INTRON(MODIFIER||||455|LOC_Os01g24880|protein_coding|CODING|LOC_Os01g24880.1|1|1),INTRON(MODIFIER||||303|LOC_Os01g24880|protein_coding|CODING|LOC_Os01g24880.2|1|1) FN2137-S.SNP.1:14032035 chr01:014032035 0 W/14032035-14032035 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.0231011;DP=4099;DP4=2603,1439,20,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18187e-07;MQSB=0.939348;RPB=0.392098;SGB=-293.171;VDB=0.000958002;EFF=INTRON(MODIFIER||||389|LOC_Os01g24920|protein_coding|CODING|LOC_Os01g24920.1|1|1) FN3358-S.SNP.1:14044377 chr01:014044377 0 W/14044377-14044377 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.898239;DP=3953;DP4=1623,2215,12,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.16479e-13;MQSB=0.975453;RPB=0.995432;SGB=81.5311;VDB=0.752201;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.1:14047336 chr01:014047336 0 W/14047336-14047336 W246-5-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1180-S.SNP.1:14067499 chr01:014067499 0 W/14067499-14067499 FN1180-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1180-S.SNP.1:14067500 chr01:014067500 0 W/14067500-14067500 FN1180-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN967-S.SNP.1:14073825 chr01:014073825 0 W/14073825-14073825 FN967-S Single Base Substitution T-C INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN931-S.SNP.1:14077513 chr01:014077513 0 W/14077513-14077513 FN931-S Single Base Substitution G-A INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN-299.SNP.1:14079329 chr01:014079329 0 W/14079329-14079329 FN-299 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g24980 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-237.SNP.1:14080406 chr01:014080406 0 W/14080406-14080406 FN-237 Single Base Substitution G-A UTR_3_PRIME HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN1318-S.SNP.1:14082991 chr01:014082991 0 W/14082991-14082991 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN810-S.SNP.1:14085252 chr01:014085252 0 W/14085252-14085252 FN810-S Single Base Substitution G-A INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-338.SNP.1:14086600 chr01:014086600 0 W/14086600-14086600 FN-338 Single Base Substitution A-G INTRON HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN1355-S.SNP.1:14091827 chr01:014091827 0 W/14091827-14091827 FN1355-S Single Base Substitution A-G INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1344-S.SNP.1:14094773 chr01:014094773 0 W/14094773-14094773 FN1344-S Single Base Substitution T-A INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1344-S.SNP.1:14094774 chr01:014094774 0 W/14094774-14094774 FN1344-S Single Base Substitution T-A INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2354.SNP.1:14094981 chr01:014094981 0 W/14094981-14094981 FN2354 SNP T -> A AC=2;AN=192;BQB=0.9839;DP=4967;DP4=2422,2204,23,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.06337e-22;MQSB=0.877463;RPB=0.643497;SGB=93.0226;VDB=0.433952;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.1:14107367 chr01:014107367 0 W/14107367-14107367 FN872-S Single Base Substitution C-A INTRON HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1338-S.SNP.1:14108368 chr01:014108368 0 W/14108368-14108368 FN1338-S Single Base Substitution A-T INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1338-S.SNP.1:14108369 chr01:014108369 0 W/14108369-14108369 FN1338-S Single Base Substitution C-T INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2211-S.SNP.1:14109110 chr01:014109110 0 W/14109110-14109110 FN2211-S SNP A -> G AC=1;AN=190;BQB=0.827343;DP=4982;DP4=2114,2611,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000200723;MQB=6.64363e-08;MQSB=0.0492592;RPB=0.985902;SGB=46.6446;VDB=0.560696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.1:14125656 chr01:014125656 0 W/14125656-14125656 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.666903;DP=3160;DP4=1576,1525,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00126582;MQB=6.3224e-06;MQSB=0.00595138;RPB=0.984398;SGB=-11.926;VDB=0.448306;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A677|1247|LOC_Os01g25040|protein_coding|CODING|LOC_Os01g25040.1|6|1) FN-136.SNP.1:14133100 chr01:014133100 0 W/14133100-14133100 FN-136 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g25060 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1062-S.SNP.1:14134856 chr01:014134856 0 W/14134856-14134856 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2475.SNP.1:14134856 chr01:014134856 0 W/14134856-14134856 FN2475 SNP G -> A AC=1;AN=200;BQB=0.84131;DP=3061;DP4=2268,527,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.30371e-06;MQSB=1.21362e-11;RPB=0.827126;SGB=40.2696;VDB=0.321842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.1:14137892 chr01:014137892 0 W/14137892-14137892 FN2496 SNP C -> T AC=1;AN=200;BQB=0.900403;DP=5256;DP4=2359,2587,13,14;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0721081;MQB=0.0469418;MQSB=0.104777;RPB=0.99946;SGB=23.9365;VDB=0.305303;EFF=UTR_3_PRIME(MODIFIER||282||321|LOC_Os01g25065|protein_coding|CODING|LOC_Os01g25065.1|1|1) FN-84.SNP.1:14137934 chr01:014137934 0 W/14137934-14137934 FN-84 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN846-S.SNP.1:14137974 chr01:014137974 0 W/14137974-14137974 FN846-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2329.SNP.1:14139978 chr01:014139978 0 W/14139978-14139978 FN2329 SNP A -> G AC=1;AN=192;BQB=0.971302;DP=5084;DP4=2187,2541,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00373721;MQB=2.34856e-11;MQSB=5.55612e-13;RPB=0.811634;SGB=22.9983;VDB=0.984377;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.1:14144613 chr01:014144613 0 W/14144613-14144613 FN533-S Single Base Substitution G-C INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN1380-S.SNP.1:14145356 chr01:014145356 0 W/14145356-14145356 FN1380-S Single Base Substitution A-T INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN_830-6-1.SNP.1:14146921 chr01:014146921 0 W/14146921-14146921 FN_830-6-1 Single Base Substitution C-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3799-S.SNP.1:14148533 chr01:014148533 0 W/14148533-14148533 FN3799-S SNP C -> A AC=1;AN=190;BQB=0.965967;DP=2783;DP4=1503,1202,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.94402e-09;MQSB=0.999112;RPB=0.918899;SGB=58.2031;VDB=0.736899;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.1:14148653 chr01:014148653 0 W/14148653-14148653 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1568-S.SNP.1:14149775 chr01:014149775 0 W/14149775-14149775 FN1568-S Single Base Substitution T-A INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN-140.SNP.1:14155411 chr01:014155411 0 W/14155411-14155411 FN-140 Single Base Substitution C-T INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1069-S.SNP.1:14158371 chr01:014158371 0 W/14158371-14158371 FN1069-S Single Base Substitution C-T INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3492-S.SNP.1:14160013 chr01:014160013 0 W/14160013-14160013 FN3492-S SNP G -> T AC=2;AN=184;BQB=0.823832;DP=2932;DP4=1486,1339,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.39115e-15;MQSB=0.281033;RPB=0.838683;SGB=130.135;VDB=0.830466;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.1:14165816 chr01:014165816 0 W/14165816-14165816 FN1475-S Single Base Substitution T-C INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN-152.SNP.1:14170023 chr01:014170023 0 W/14170023-14170023 FN-152 Single Base Substitution C-A INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN788-S.SNP.1:14170742 chr01:014170742 0 W/14170742-14170742 FN788-S Single Base Substitution T-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1444-S.SNP.1:14196489 chr01:014196489 0 W/14196489-14196489 FN1444-S Single Base Substitution G-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN4113-S.SNP.1:14196675 chr01:014196675 0 W/14196675-14196675 FN4113-S SNP G -> A AC=1;AN=182;BQB=0.985206;DP=2070;DP4=1207,781,7,2;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0;MQB=9.22897e-05;MQSB=0.923562;RPB=0.985255;SGB=21.5845;VDB=0.853272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.1:14203261 chr01:014203261 0 W/14203261-14203261 FN3968-S SNP G -> C AC=2;AN=168;BQB=0.998887;DP=2580;DP4=1132,1321,15,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.80714e-13;MQSB=0.388936;RPB=0.329446;SGB=113.657;VDB=0.267914;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.1:14207318 chr01:014207318 0 W/14207318-14207318 FN633-S Single Base Substitution G-A INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1374-S.SNP.1:14207549 chr01:014207549 0 W/14207549-14207549 FN1374-S Single Base Substitution C-G INTERGENIC Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1292-S.SNP.1:14213141 chr01:014213141 0 W/14213141-14213141 FN1292-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3809-S.SNP.1:14229159 chr01:014229159 0 W/14229159-14229159 FN3809-S SNP G -> A AC=1;AN=190;BQB=0.976934;DP=3384;DP4=1518,1737,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.00100518;MQSB=1.08981e-12;RPB=0.933253;SGB=13.4442;VDB=0.507556;EFF=INTRON(MODIFIER||||369|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.1|3|1),INTRON(MODIFIER||||322|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.2|2|1),INTRON(MODIFIER||||322|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.5|3|1),INTRON(MODIFIER||||294|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.6|3|1) FN3849-S.SNP.1:14230124 chr01:014230124 0 W/14230124-14230124 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.986763;DP=2442;DP4=1102,1184,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0;MQB=4.1849e-05;MQSB=0.0185149;RPB=0.611123;SGB=38.3284;VDB=0.61407;EFF=INTRON(MODIFIER||||369|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.1|3|1),INTRON(MODIFIER||||322|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.2|2|1),INTRON(MODIFIER||||322|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.5|3|1),INTRON(MODIFIER||||294|LOC_Os01g25189|protein_coding|CODING|LOC_Os01g25189.6|3|1) FN1064-S.SNP.1:14232677 chr01:014232677 0 W/14232677-14232677 FN1064-S Single Base Substitution T-C INTRON HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2224-S.SNP.1:14237519 chr01:014237519 0 W/14237519-14237519 FN2224-S SNP C -> T AC=1;AN=190;BQB=0.876235;DP=4576;DP4=2398,1867,23,9;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0443619;MQB=0.574818;MQSB=8.02205e-39;RPB=0.0117409;SGB=103.624;VDB=0.319274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.1:14238763 chr01:014238763 0 W/14238763-14238763 FN2126-S SNP T -> A AC=1;AN=168;BQB=0.513739;DP=3274;DP4=1566,1668,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0360415;MQB=0.173014;MQSB=2.77337e-20;RPB=0.481527;SGB=-74.3449;VDB=0.414899;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.1:14244358 chr01:014244358 0 W/14244358-14244358 FN939-S Single Base Substitution G-T INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN-115.SNP.1:14246096 chr01:014246096 0 W/14246096-14246096 FN-115 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g25210 retrotransposon protein, putative, unclassified SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2437.SNP.1:14248841 chr01:014248841 0 W/14248841-14248841 FN2437 SNP A -> T AC=1;AN=200;BQB=0.752691;DP=4904;DP4=2307,2348,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84398e-18;MQSB=0.579476;RPB=0.998722;SGB=97.9523;VDB=0.0614532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.1:14254697 chr01:014254697 0 W/14254697-14254697 FN1288-S Single Base Substitution C-T INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1288-S.SNP.1:14254699 chr01:014254699 0 W/14254699-14254699 FN1288-S Single Base Substitution A-T INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1114-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN1114-S Single Base Substitution T-G INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2788-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN2788-S SNP T -> G AC=1;AN=198;BQB=0.992571;DP=3988;DP4=1839,1887,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.03788e-19;MQSB=0.934126;RPB=0.974084;SGB=112.051;VDB=0.641547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN3657-S SNP T -> G AC=1;AN=190;BQB=0.960121;DP=2752;DP4=1302,1371,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43112e-09;MQSB=0.958966;RPB=0.988441;SGB=39.6545;VDB=0.897932;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN706-S Single Base Substitution T-G INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN920-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN920-S Single Base Substitution T-G INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN993-S.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 FN993-S Single Base Substitution T-G INTERGENIC HOMO SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. W138-2-1.SNP.1:14258265 chr01:014258265 0 W/14258265-14258265 W138-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2437.SNP.1:14258709 chr01:014258709 0 W/14258709-14258709 FN2437 SNP G -> A AC=1;AN=200;BQB=0.823576;DP=4721;DP4=2035,2403,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68406e-09;MQSB=0.991973;RPB=0.735953;SGB=26.8797;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.1:14264131 chr01:014264131 0 W/14264131-14264131 FN953-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3794-S.SNP.1:14265342 chr01:014265342 0 W/14265342-14265342 FN3794-S SNP T -> C AC=1;AN=190;BQB=0.999173;DP=2837;DP4=1381,1360,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.01806e-10;MQSB=0.984143;RPB=0.762786;SGB=76.4186;VDB=0.994098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L310P|877|LOC_Os01g25270|protein_coding|CODING|LOC_Os01g25270.1|1|1) FN1033-S.SNP.1:14281075 chr01:014281075 0 W/14281075-14281075 FN1033-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g25280 jacalin-like lectin domain containing protein, expressed SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2463.SNP.1:14283487 chr01:014283487 0 W/14283487-14283487 FN2463 SNP A -> T AC=1;AN=200;BQB=0.424581;DP=4274;DP4=2173,1825,12,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.50632e-06;MQSB=0.873933;RPB=0.976477;SGB=3.06925;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.1:14287207 chr01:014287207 0 W/14287207-14287207 FN1325-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN4260-S.SNP.1:14287249 chr01:014287249 0 W/14287249-14287249 FN4260-S SNP T -> C AC=1;AN=170;BQB=0.940326;DP=2401;DP4=1154,1171,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=2.01505e-07;MQSB=0.212994;RPB=0.993408;SGB=61.2001;VDB=0.885662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.1:14287496 chr01:014287496 0 W/14287496-14287496 FN1068-S Single Base Substitution G-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN_N1-169-1.SNP.1:14298338 chr01:014298338 0 W/14298338-14298338 FN_N1-169-1 Single Base Substitution C-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1217-S.SNP.1:14302883 chr01:014302883 0 W/14302883-14302883 FN1217-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3455-S.SNP.1:14303859 chr01:014303859 0 W/14303859-14303859 FN3455-S SNP G -> C AC=1;AN=184;BQB=0.678846;DP=2511;DP4=1122,1321,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00036302;MQSB=0.997716;RPB=0.999993;SGB=48.7425;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.1:14308741 chr01:014308741 0 W/14308741-14308741 FN2274-S SNP T -> C AC=1;AN=190;BQB=0.993678;DP=5061;DP4=2598,2233,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.93673e-15;MQSB=0.780594;RPB=0.990692;SGB=96.5165;VDB=0.25351;EFF=INTRON(MODIFIER||||1064|LOC_Os01g25330|protein_coding|CODING|LOC_Os01g25330.1|1|1),INTRON(MODIFIER||||1064|LOC_Os01g25330|protein_coding|CODING|LOC_Os01g25330.2|1|1),INTRON(MODIFIER||||1064|LOC_Os01g25330|protein_coding|CODING|LOC_Os01g25330.3|1|1) FN-204.SNP.1:14312413 chr01:014312413 0 W/14312413-14312413 FN-204 Single Base Substitution A-C INTRON HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-198.SNP.1:14312546 chr01:014312546 0 W/14312546-14312546 FN-198 Single Base Substitution G-T INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN416-S.SNP.1:14321212 chr01:014321212 0 W/14321212-14321212 FN416-S Single Base Substitution G-C INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN524-S.SNP.1:14323390 chr01:014323390 0 W/14323390-14323390 FN524-S Single Base Substitution A-C INTERGENIC HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN3916-S.SNP.1:14333821 chr01:014333821 0 W/14333821-14333821 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.999856;DP=2413;DP4=1234,1112,12,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.06507e-10;MQSB=0.975192;RPB=0.951752;SGB=68.9144;VDB=0.750203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.1:14339031 chr01:014339031 0 W/14339031-14339031 FN2334 SNP C -> T AC=1;AN=192;BQB=0.521319;DP=4813;DP4=2409,2128,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44041e-12;MQSB=0.521046;RPB=0.152792;SGB=10.4835;VDB=0.00929024;EFF=INTERGENIC(MODIFIER||||||||||1) FN3488-S.SNP.1:14344109 chr01:014344109 0 W/14344109-14344109 FN3488-S SNP A -> G AC=1;AN=184;BQB=0.929788;DP=3020;DP4=1239,1556,5,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.88925e-10;MQSB=0.950724;RPB=0.23804;SGB=11.3677;VDB=0.519231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V845A|1527|LOC_Os01g25386|protein_coding|CODING|LOC_Os01g25386.1|4|1) FN883-S.SNP.1:14347753 chr01:014347753 0 W/14347753-14347753 FN883-S Single Base Substitution G-A INTRON HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1211-S.SNP.1:14350109 chr01:014350109 0 W/14350109-14350109 FN1211-S Single Base Substitution G-A INTRON HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN898-S.SNP.1:14355091 chr01:014355091 0 W/14355091-14355091 FN898-S Single Base Substitution C-T INTRON HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1304-S.SNP.1:14370429 chr01:014370429 0 W/14370429-14370429 FN1304-S Single Base Substitution T-C INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN577-S.SNP.1:14371180 chr01:014371180 0 W/14371180-14371180 FN577-S Single Base Substitution C-T STOP_GAINED HET LOC_Os01g25402 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN2437.SNP.1:14371364 chr01:014371364 0 W/14371364-14371364 FN2437 SNP A -> G AC=1;AN=200;BQB=0.383561;DP=4036;DP4=2139,1560,18,20;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0626858;MQB=0.869803;MQSB=0;RPB=0.963657;SGB=126.794;VDB=0.28824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E1195G|1926|LOC_Os01g25402|protein_coding|CODING|LOC_Os01g25402.1|4|1) 702-4.SNP.1:14378004 chr01:014378004 0 W/14378004-14378004 702-4 Single Base Substitution G-T INTERGENIC Homo SNo: 1445, Mutant_ID: 702-4, Generation: M2, Mutations: 27, Genes: 28, Seed availability: Yes. FN2322.SNP.1:14385316 chr01:014385316 0 W/14385316-14385316 FN2322 SNP G -> A AC=1;AN=192;BQB=0.752923;DP=4079;DP4=2002,1867,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000245158;MQB=8.5548e-14;MQSB=0.0703377;RPB=0.426308;SGB=46.8644;VDB=0.437539;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.1:14389321 chr01:014389321 0 W/14389321-14389321 FN465-S Single Base Substitution A-G INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2085-S.SNP.1:14393417 chr01:014393417 0 W/14393417-14393417 FN2085-S SNP G -> A AC=1;AN=168;BQB=0.841511;DP=3662;DP4=1637,1985,16,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47674e-11;MQSB=0.935696;RPB=0.604191;SGB=19.9297;VDB=0.916514;EFF=INTRON(MODIFIER||||267|LOC_Os01g25440|protein_coding|CODING|LOC_Os01g25440.1|6|1) FN-348.SNP.1:14395077 chr01:014395077 0 W/14395077-14395077 FN-348 Single Base Substitution G-T INTRON HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1219-S.SNP.1:14400803 chr01:014400803 0 W/14400803-14400803 FN1219-S Single Base Substitution T-C INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1422-S.SNP.1:14416269 chr01:014416269 0 W/14416269-14416269 FN1422-S Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os01g25450 AIG1 family protein, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1153-S.SNP.1:14420650 chr01:014420650 0 W/14420650-14420650 FN1153-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g25450 AIG1 family protein, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN2141-S.SNP.1:14428308 chr01:014428308 0 W/14428308-14428308 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.0909721;DP=4639;DP4=2380,2198,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46109e-13;MQSB=0.989991;RPB=0.998258;SGB=-165.748;VDB=0.447432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E4547K|5436|LOC_Os01g25450|protein_coding|CODING|LOC_Os01g25450.1|1|1) FN2441.SNP.1:14437692 chr01:014437692 0 W/14437692-14437692 FN2441 SNP G -> C AC=1;AN=200;BQB=0.513158;DP=4765;DP4=2194,2355,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.03817e-12;MQSB=0.75724;RPB=0.748616;SGB=72.7161;VDB=0.162549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.1:14438677 chr01:014438677 0 W/14438677-14438677 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.97047;DP=3887;DP4=2075,1626,10,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.95396e-05;MQSB=0.998521;RPB=0.990611;SGB=29.3637;VDB=0.526728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V307I|503|LOC_Os01g25460|protein_coding|CODING|LOC_Os01g25460.1|1|1) FN744-S.SNP.1:14441598 chr01:014441598 0 W/14441598-14441598 FN744-S Single Base Substitution G-A INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3294-S.SNP.1:14448485 chr01:014448485 0 W/14448485-14448485 FN3294-S SNP A -> G AC=1;AN=184;BQB=0.773991;DP=2665;DP4=1149,1389,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11759e-07;MQSB=0.967388;RPB=0.459858;SGB=44.2207;VDB=0.268133;EFF=INTRON(MODIFIER||||627|LOC_Os01g25484|protein_coding|CODING|LOC_Os01g25484.1|1|1),INTRON(MODIFIER||||596|LOC_Os01g25484|protein_coding|CODING|LOC_Os01g25484.2|1|1) FN3983-S.SNP.1:14450401 chr01:014450401 0 W/14450401-14450401 FN3983-S SNP T -> A AC=2;AN=168;BQB=0.625358;DP=2798;DP4=1251,1385,11,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.08506e-08;MQSB=0.958122;RPB=0.610896;SGB=58.7637;VDB=0.440029;EFF=INTRON(MODIFIER||||627|LOC_Os01g25484|protein_coding|CODING|LOC_Os01g25484.1|1|1),INTRON(MODIFIER||||596|LOC_Os01g25484|protein_coding|CODING|LOC_Os01g25484.2|1|1) FN1156-XA21.SNP.1:14455487 chr01:014455487 0 W/14455487-14455487 FN1156-XA21 Single Base Substitution A-G INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN4077-S.SNP.1:14459945 chr01:014459945 0 W/14459945-14459945 FN4077-S SNP A -> T AC=2;AN=182;BQB=0.985628;DP=3305;DP4=1676,1507,7,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.09053e-11;MQSB=0.997559;RPB=0.917994;SGB=84.7091;VDB=0.607878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.1:14460269 chr01:014460269 0 W/14460269-14460269 FN-181 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3728-S.SNP.1:14479663 chr01:014479663 0 W/14479663-14479663 FN3728-S SNP C -> T AC=2;AN=190;BQB=0.901216;DP=2679;DP4=1499,1057,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.35257e-14;MQSB=0.999907;RPB=0.484903;SGB=99.1879;VDB=0.634612;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.1:14483092 chr01:014483092 0 W/14483092-14483092 FN879-S Single Base Substitution A-T INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN459-S.SNP.1:14484599 chr01:014484599 0 W/14484599-14484599 FN459-S Single Base Substitution T-C INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2417.SNP.1:14486774 chr01:014486774 0 W/14486774-14486774 FN2417 SNP T -> C AC=1;AN=200;BQB=0.646384;DP=4462;DP4=2223,1648,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.37904e-13;MQSB=0.998891;RPB=0.566112;SGB=45.1159;VDB=0.709957;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E100G|116|LOC_Os01g25560|protein_coding|CODING|LOC_Os01g25560.1|1|1) FN1571-S.SNP.1:14487801 chr01:014487801 0 W/14487801-14487801 FN1571-S Single Base Substitution A-G INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN3286-S.SNP.1:14491430 chr01:014491430 0 W/14491430-14491430 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.979651;DP=3775;DP4=2052,1647,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.91921e-11;MQSB=0.474949;RPB=0.99959;SGB=75.8731;VDB=0.313211;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P33L|1924|LOC_Os01g25580|protein_coding|CODING|LOC_Os01g25580.1|1|1) FN3286-S.SNP.1:14491431 chr01:014491431 0 W/14491431-14491431 FN3286-S SNP T -> C AC=1;AN=184;BQB=0.95256;DP=3765;DP4=1997,1568,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.92605e-12;MQSB=0.555755;RPB=0.952494;SGB=56.8786;VDB=0.41323;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P33|1924|LOC_Os01g25580|protein_coding|CODING|LOC_Os01g25580.1|1|1) FN3490-S.SNP.1:14493167 chr01:014493167 0 W/14493167-14493167 FN3490-S SNP C -> A AC=1;AN=184;BQB=0.799102;DP=3019;DP4=1861,1086,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00430606;MQB=0.000204706;MQSB=6.35371e-15;RPB=0.963034;SGB=44.2207;VDB=0.631431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A612E|1924|LOC_Os01g25580|protein_coding|CODING|LOC_Os01g25580.1|1|1) FN4163-S.SNP.1:14495632 chr01:014495632 0 W/14495632-14495632 FN4163-S SNP C -> T AC=1;AN=170;BQB=0.160923;DP=2331;DP4=1032,1251,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.0181191;MQSB=0.00124255;RPB=0.411048;SGB=41.7633;VDB=0.753481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1369W|1924|LOC_Os01g25580|protein_coding|CODING|LOC_Os01g25580.1|3|1) FN3472-S.SNP.1:14495989 chr01:014495989 0 W/14495989-14495989 FN3472-S SNP G -> A AC=1;AN=184;BQB=0.989882;DP=3407;DP4=1774,1569,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000587027;MQB=6.3258e-07;MQSB=0.000209392;RPB=0.557783;SGB=71.3514;VDB=0.811052;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D1488N|1924|LOC_Os01g25580|protein_coding|CODING|LOC_Os01g25580.1|3|1) FN2582-S.SNP.1:14497965 chr01:014497965 0 W/14497965-14497965 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.999004;DP=3904;DP4=2136,1494,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000512295;MQB=9.76407e-05;MQSB=0.677859;RPB=0.322105;SGB=22.1736;VDB=0.168864;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1038|1046|LOC_Os01g25590|protein_coding|CODING|LOC_Os01g25590.1|1|1) FN2468.SNP.1:14498298 chr01:014498298 0 W/14498298-14498298 FN2468 SNP C -> A AC=1;AN=200;BQB=0.507526;DP=4286;DP4=2003,1956,7,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000466636;MQB=4.32725e-05;MQSB=0.307264;RPB=0.183609;SGB=63.4749;VDB=0.00772006;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q927H|1046|LOC_Os01g25590|protein_coding|CODING|LOC_Os01g25590.1|1|1) FN932-S.SNP.1:14498341 chr01:014498341 0 W/14498341-14498341 FN932-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g25590 retrotransposon protein, putative, unclassified, expressed SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2674-S.SNP.1:14504111 chr01:014504111 0 W/14504111-14504111 FN2674-S SNP T -> C AC=1;AN=200;BQB=0.954616;DP=4820;DP4=2275,2341,7,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.10877e-13;MQSB=0.996097;RPB=0.859063;SGB=47.7211;VDB=0.14378;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.1:14514088 chr01:014514088 0 W/14514088-14514088 FN-379 Single Base Substitution T-C INTRON HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1094-S.SNP.1:14522504 chr01:014522504 0 W/14522504-14522504 FN1094-S Single Base Substitution G-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2310.SNP.1:14524636 chr01:014524636 0 W/14524636-14524636 FN2310 SNP G -> T AC=1;AN=192;BQB=0.339414;DP=5433;DP4=2539,2407,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00018406;MQB=5.32293e-13;MQSB=0.955586;RPB=0.839443;SGB=71.8591;VDB=0.806503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.1:14533779 chr01:014533779 0 W/14533779-14533779 FN3424-S SNP G -> A AC=1;AN=184;BQB=0.964874;DP=3132;DP4=1307,1758,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.00697e-06;MQSB=0.913766;RPB=0.986704;SGB=35.1773;VDB=0.789918;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.1:14537681 chr01:014537681 0 W/14537681-14537681 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.958936;DP=2243;DP4=920,1249,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=0.00049565;MQSB=0.999645;RPB=0.929968;SGB=47.0672;VDB=0.600249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P541L|1695|LOC_Os01g25650|protein_coding|CODING|LOC_Os01g25650.1|3|1) FN3913-S.SNP.1:14539704 chr01:014539704 0 W/14539704-14539704 FN3913-S SNP C -> G AC=1;AN=158;BQB=0.731846;DP=2245;DP4=1114,1047,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.52348e-07;MQSB=0.995121;RPB=0.395752;SGB=50.9207;VDB=0.192221;EFF=INTRON(MODIFIER||||1695|LOC_Os01g25650|protein_coding|CODING|LOC_Os01g25650.1|7|1) FN1221-S.SNP.1:14540781 chr01:014540781 0 W/14540781-14540781 FN1221-S Single Base Substitution T-A INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN-261.SNP.1:14540790 chr01:014540790 0 W/14540790-14540790 FN-261 Single Base Substitution A-G INTRON HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN3831-S.SNP.1:14547166 chr01:014547166 0 W/14547166-14547166 FN3831-S SNP A -> T AC=1;AN=190;BQB=0.880613;DP=2361;DP4=1094,1153,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.74923e-06;MQSB=0.851868;RPB=0.908205;SGB=36.1006;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.1:14548343 chr01:014548343 0 W/14548343-14548343 FN3496-S SNP C -> T AC=2;AN=188;BQB=0.845312;DP=3549;DP4=1978,1466,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.81163e-18;MQSB=0.128406;RPB=0.674146;SGB=135.302;VDB=0.361561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.1:14549903 chr01:014549903 0 W/14549903-14549903 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN923-S.SNP.1:14551746 chr01:014551746 0 W/14551746-14551746 FN923-S Single Base Substitution G-T INTRON HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN-181.SNP.1:14559156 chr01:014559156 0 W/14559156-14559156 FN-181 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3309-S.SNP.1:14561965 chr01:014561965 0 W/14561965-14561965 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.587095;DP=5809;DP4=1666,3941,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00051644;MQB=8.75284e-09;MQSB=0.835011;RPB=0.947711;SGB=98.4821;VDB=0.0104551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.1:14562502 chr01:014562502 0 W/14562502-14562502 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.988066;DP=4777;DP4=2034,2538,5,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00481474;MQB=0.116658;MQSB=4.20433e-21;RPB=0.259929;SGB=54.6902;VDB=0.342284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S554N|640|LOC_Os01g25688|protein_coding|CODING|LOC_Os01g25688.1|3|1) FN3698-S.SNP.1:14564814 chr01:014564814 0 W/14564814-14564814 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.898951;DP=2807;DP4=1494,1169,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0313502;MQB=0.000650409;MQSB=7.40917e-05;RPB=0.995015;SGB=35.4339;VDB=0.221242;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.1:14567016 chr01:014567016 0 W/14567016-14567016 FN450-S Single Base Substitution G-T INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN3629-S.SNP.1:14594191 chr01:014594191 0 W/14594191-14594191 FN3629-S SNP A -> C AC=1;AN=190;BQB=0.587321;DP=2195;DP4=928,980,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41575e-05;MQSB=0.600608;RPB=0.664712;SGB=4.11112;VDB=0.305467;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.1:14611233 chr01:014611233 0 W/14611233-14611233 FN1288-S Single Base Substitution G-A INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN-140.SNP.1:14612680 chr01:014612680 0 W/14612680-14612680 FN-140 Single Base Substitution A-T INTRON HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN549-S.SNP.1:14616677 chr01:014616677 0 W/14616677-14616677 FN549-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g25810 powdery mildew resistance protein PM3A, putative, expressed SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN-290.SNP.1:14618445 chr01:014618445 0 W/14618445-14618445 FN-290 Single Base Substitution C-A INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2579-S.SNP.1:14626095 chr01:014626095 0 W/14626095-14626095 FN2579-S SNP C -> A AC=1;AN=198;BQB=0.40663;DP=4457;DP4=2336,1888,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.95796e-08;MQSB=0.796656;RPB=0.920729;SGB=18.9201;VDB=0.0101128;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V176L|905|LOC_Os01g25820|protein_coding|CODING|LOC_Os01g25820.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V176L|880|LOC_Os01g25820|protein_coding|CODING|LOC_Os01g25820.2|2|1) FN2122-S.SNP.1:14634354 chr01:014634354 0 W/14634354-14634354 FN2122-S SNP T -> C AC=2;AN=168;BQB=0.921201;DP=3953;DP4=1679,2200,22,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.54608e-23;MQSB=0.956416;RPB=0.999907;SGB=-54.3037;VDB=0.693349;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.1:14635062 chr01:014635062 0 W/14635062-14635062 FN3577-S SNP C -> A AC=1;AN=188;BQB=0.999356;DP=2525;DP4=1204,1255,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=2.00104e-08;MQSB=0.111533;RPB=0.568263;SGB=80.782;VDB=0.865256;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.1:14637258 chr01:014637258 0 W/14637258-14637258 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2124-S.SNP.1:14647740 chr01:014647740 0 W/14647740-14647740 FN2124-S SNP C -> A AC=2;AN=168;BQB=0.991068;DP=3769;DP4=1792,1909,17,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.95483e-27;MQSB=0.923685;RPB=0.566414;SGB=0.136886;VDB=0.564326;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.1:14651777 chr01:014651777 0 W/14651777-14651777 FN1049-S Single Base Substitution C-G INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3540-S.SNP.1:14652280 chr01:014652280 0 W/14652280-14652280 FN3540-S SNP T -> C AC=2;AN=188;BQB=0.893947;DP=2772;DP4=1331,1354,14,13;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.001443;MQB=8.14622e-14;MQSB=0.641113;RPB=0.568443;SGB=117.128;VDB=0.147023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D764G|880|LOC_Os01g25839|protein_coding|CODING|LOC_Os01g25839.1|10|1) FN1400-S.SNP.1:14652985 chr01:014652985 0 W/14652985-14652985 FN1400-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g25839 retrotransposon protein, putative, Ty1-copia subclass SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1422-S.SNP.1:14653220 chr01:014653220 0 W/14653220-14653220 FN1422-S Single Base Substitution T-A INTRON Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN906-S.SNP.1:14653909 chr01:014653909 0 W/14653909-14653909 FN906-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g25839 retrotransposon protein, putative, Ty1-copia subclass SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2648-S.SNP.1:14665619 chr01:014665619 0 W/14665619-14665619 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.502814;DP=7413;DP4=3040,3881,66,72;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.142857;MQB=1.97649e-17;MQSB=0.00110259;RPB=2.33092e-21;SGB=-4864.7;VDB=1.44867e-28;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1138|1792|LOC_Os01g25860|protein_coding|CODING|LOC_Os01g25860.1|3|1) FN3818-S.SNP.1:14668400 chr01:014668400 0 W/14668400-14668400 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.821678;DP=3116;DP4=1713,1320,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.025353;MQB=0.0116463;MQSB=8.68393e-11;RPB=0.972711;SGB=15.9981;VDB=0.896381;EFF=INTRON(MODIFIER||||1792|LOC_Os01g25860|protein_coding|CODING|LOC_Os01g25860.1|2|1) FN494-S.SNP.1:14675904 chr01:014675904 0 W/14675904-14675904 FN494-S Single Base Substitution T-C INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN739-S.SNP.1:14676247 chr01:014676247 0 W/14676247-14676247 FN739-S Single Base Substitution G-A INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN_827-1.SNP.1:14684592 chr01:014684592 0 W/14684592-14684592 FN_827-1 Single Base Substitution T-G HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1585-S.SNP.1:14686085 chr01:014686085 0 W/14686085-14686085 FN1585-S Single Base Substitution G-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1585-S.SNP.1:14686087 chr01:014686087 0 W/14686087-14686087 FN1585-S Single Base Substitution A-G INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3708-S.SNP.1:14686193 chr01:014686193 0 W/14686193-14686193 FN3708-S SNP A -> C AC=1;AN=190;BQB=0.896709;DP=2759;DP4=1129,1534,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63928e-05;MQSB=0.998916;RPB=0.207303;SGB=39.9877;VDB=0.563606;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.1:14691436 chr01:014691436 0 W/14691436-14691436 FN2612-S SNP A -> C AC=1;AN=198;BQB=0.846977;DP=4480;DP4=1945,2279,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.41961e-15;MQSB=0.811864;RPB=0.657359;SGB=18.9201;VDB=0.332941;EFF=INTRON(MODIFIER||||207|LOC_Os01g25890|protein_coding|CODING|LOC_Os01g25890.1|1|1) FN506-S.SNP.1:14691600 chr01:014691600 0 W/14691600-14691600 FN506-S Single Base Substitution T-C INTRON HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN-199.SNP.1:14693312 chr01:014693312 0 W/14693312-14693312 FN-199 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g25900 retrotransposon protein, putative, unclassified, expressed SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-168.SNP.1:14699947 chr01:014699947 0 W/14699947-14699947 FN-168 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os01g25910 retrotransposon protein, putative, unclassified, expressed SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1684-S.SNP.1:14704418 chr01:014704418 0 W/14704418-14704418 FN1684-S SNP C -> T AC=1;AN=188;BQB=0.270832;DP=3301;DP4=2014,1243,15,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.11595e-08;MQSB=0.25316;RPB=0.989037;SGB=-66.2726;VDB=0.311615;EFF=INTRON(MODIFIER||||233|LOC_Os01g25920|protein_coding|CODING|LOC_Os01g25920.1|2|1),INTRON(MODIFIER||||119|LOC_Os01g25920|protein_coding|CODING|LOC_Os01g25920.2|1|1),INTRON(MODIFIER||||119|LOC_Os01g25920|protein_coding|CODING|LOC_Os01g25920.3|1|1) FN_769-4-1.SNP.1:14705204 chr01:014705204 0 W/14705204-14705204 FN_769-4-1 Single Base Substitution G-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1610-S.SNP.1:14709059 chr01:014709059 0 W/14709059-14709059 FN1610-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN793-S.SNP.1:14710187 chr01:014710187 0 W/14710187-14710187 FN793-S Single Base Substitution C-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3387-S.SNP.1:14711726 chr01:014711726 0 W/14711726-14711726 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.454379;DP=2211;DP4=1047,912,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.00153067;MQSB=0.457754;RPB=0.490827;SGB=-18.3665;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.1:14711939 chr01:014711939 0 W/14711939-14711939 FN514-S Single Base Substitution C-T INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3829-S.SNP.1:14714296 chr01:014714296 0 W/14714296-14714296 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.952084;DP=3753;DP4=1919,1690,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00106581;MQB=2.54739e-08;MQSB=0.478345;RPB=0.482081;SGB=67.3108;VDB=0.654918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.1:14714957 chr01:014714957 0 W/14714957-14714957 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.804262;DP=6100;DP4=3285,2469,10,18;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0606557;MQB=0.539752;MQSB=0;RPB=0.0847138;SGB=90.7419;VDB=0.0947136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.1:14719711 chr01:014719711 0 W/14719711-14719711 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.753487;DP=4007;DP4=1751,2012,150,64;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0129773;MQB=0;MQSB=0.233958;RPB=2.9339e-15;SGB=-2424.27;VDB=8.28058e-21;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.1:14726756 chr01:014726756 0 W/14726756-14726756 FN1340-S Single Base Substitution A-T STOP_GAINED HET LOC_Os01g25970 retrotransposon protein, putative, Ty1-copia subclass SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1094-S.SNP.1:14740421 chr01:014740421 0 W/14740421-14740421 FN1094-S Single Base Substitution A-G INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN510-S.SNP.1:14743981 chr01:014743981 0 W/14743981-14743981 FN510-S Single Base Substitution C-T INTRON HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN768-S.SNP.1:14744289 chr01:014744289 0 W/14744289-14744289 FN768-S Single Base Substitution G-A INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2476.SNP.1:14745702 chr01:014745702 0 W/14745702-14745702 FN2476 SNP T -> A AC=2;AN=200;BQB=0.295111;DP=4806;DP4=2125,2210,23,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.53927e-34;MQSB=0.533664;RPB=0.405842;SGB=275.313;VDB=0.0197352;EFF=INTRON(MODIFIER||||664|LOC_Os01g26000|protein_coding|CODING|LOC_Os01g26000.1|9|1) FN3979-S.SNP.1:14748428 chr01:014748428 0 W/14748428-14748428 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.442651;DP=2962;DP4=1344,1463,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.86746e-11;MQSB=0.898719;RPB=0.607242;SGB=17.068;VDB=0.234648;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.1:14757078 chr01:014757078 0 W/14757078-14757078 FN501-S Single Base Substitution T-A INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN3836-S.SNP.1:14763131 chr01:014763131 0 W/14763131-14763131 FN3836-S SNP A -> C AC=2;AN=190;BQB=0.99937;DP=2464;DP4=1199,1154,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.04292e-12;MQSB=0.999375;RPB=0.970523;SGB=90.0802;VDB=0.970363;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aGa|I154R|698|LOC_Os01g26039|protein_coding|CODING|LOC_Os01g26039.1|3|1) FN3833-S.SNP.1:14767928 chr01:014767928 0 W/14767928-14767928 FN3833-S SNP G -> A AC=1;AN=190;BQB=0.997691;DP=3175;DP4=1520,1568,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05583e-06;MQSB=0.942649;RPB=0.204808;SGB=39.9877;VDB=0.348463;EFF=INTRON(MODIFIER||||208|LOC_Os01g26060|protein_coding|CODING|LOC_Os01g26060.1|1|1) FN2581-S.SNP.1:14774591 chr01:014774591 0 W/14774591-14774591 FN2581-S SNP C -> T AC=1;AN=198;BQB=0.994613;DP=3334;DP4=1991,1133,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00029994;MQB=2.64348e-05;MQSB=0.843239;RPB=0.839206;SGB=18.5788;VDB=0.0694872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.1:14783536 chr01:014783536 0 W/14783536-14783536 FN2621-S SNP C -> A AC=1;AN=200;BQB=0.634847;DP=4971;DP4=2331,2315,9,22;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00160933;MQB=2.5417e-16;MQSB=0.987283;RPB=0.684164;SGB=101.557;VDB=0.949163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.1:14790091 chr01:014790091 0 W/14790091-14790091 FN2330 SNP A -> G AC=1;AN=192;BQB=0.788261;DP=4868;DP4=2043,2216,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.7235e-09;MQSB=0.475346;RPB=0.996727;SGB=-13.0756;VDB=0.354412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.1:14797339 chr01:014797339 0 W/14797339-14797339 FN1280-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1084-S.SNP.1:14805921 chr01:014805921 0 W/14805921-14805921 FN1084-S Single Base Substitution G-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-53.SNP.1:14807490 chr01:014807490 0 W/14807490-14807490 FN-53 Single Base Substitution A-T INTERGENIC HOMO SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN4072-S.SNP.1:14809415 chr01:014809415 0 W/14809415-14809415 FN4072-S SNP G -> A AC=2;AN=182;BQB=0.999792;DP=2570;DP4=1240,1244,12,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=2.54919e-06;MQSB=0.000180855;RPB=0.638235;SGB=80.1982;VDB=0.368249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.1:14814371 chr01:014814371 0 W/14814371-14814371 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.245152;DP=4629;DP4=2166,2233,19,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34888e-19;MQSB=0.856973;RPB=0.23603;SGB=108.768;VDB=0.141756;EFF=INTRON(MODIFIER||||1198|LOC_Os01g26160|protein_coding|CODING|LOC_Os01g26160.1|11|1),INTRON(MODIFIER||||1174|LOC_Os01g26160|protein_coding|CODING|LOC_Os01g26160.2|11|1) FN-99.SNP.1:14816308 chr01:014816308 0 W/14816308-14816308 FN-99 Single Base Substitution T-C INTRON HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN857-S.SNP.1:14819576 chr01:014819576 0 W/14819576-14819576 FN857-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g26160 exportin 1, putative, expressed SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN1299-S.SNP.1:14821468 chr01:014821468 0 W/14821468-14821468 FN1299-S Single Base Substitution C-G INTRON HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2476.SNP.1:14840700 chr01:014840700 0 W/14840700-14840700 FN2476 SNP A -> T AC=2;AN=200;BQB=0.226077;DP=2068;DP4=1148,504,6,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=9.54221e-07;MQSB=1.81894e-12;RPB=0.981223;SGB=21.6694;VDB=0.392815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.1:14844151 chr01:014844151 0 W/14844151-14844151 FN3637-S SNP C -> T AC=2;AN=190;BQB=0.905774;DP=2865;DP4=1469,1292,14,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.94831e-18;MQSB=0.590716;RPB=0.700812;SGB=69.6295;VDB=0.827927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G39E|844|LOC_Os01g26190|protein_coding|CODING|LOC_Os01g26190.1|1|1) FN-281.SNP.1:14846713 chr01:014846713 0 W/14846713-14846713 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3729-S.SNP.1:14850967 chr01:014850967 0 W/14850967-14850967 FN3729-S SNP A -> G AC=1;AN=190;BQB=0.999757;DP=2622;DP4=1144,1382,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.32113e-09;MQSB=0.907661;RPB=0.778688;SGB=67.3108;VDB=0.748707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.1:14855832 chr01:014855832 0 W/14855832-14855832 FN2559-S SNP A -> T AC=2;AN=198;BQB=0.999369;DP=4835;DP4=2356,2241,8,8;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=7.99476e-07;MQSB=0.4913;RPB=0.95823;SGB=67.9293;VDB=0.0364192;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.1:14857471 chr01:014857471 0 W/14857471-14857471 FN870-S Single Base Substitution G-T INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN2559-S.SNP.1:14861501 chr01:014861501 0 W/14861501-14861501 FN2559-S SNP G -> A AC=2;AN=198;BQB=0.38225;DP=4201;DP4=1806,1994,16,15;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0133302;MQB=0.00611332;MQSB=0.0315247;RPB=0.723034;SGB=-41.0942;VDB=0.393848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D14N|1714|LOC_Os01g26224|protein_coding|CODING|LOC_Os01g26224.1|2|1) W591-4-1.SNP.1:14865786 chr01:014865786 0 W/14865786-14865786 W591-4-1 Single Base Substitution G-A INTRON HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2223-S.SNP.1:14877089 chr01:014877089 0 W/14877089-14877089 FN2223-S SNP C -> T AC=2;AN=190;BQB=0.969592;DP=2879;DP4=540,2034,6,35;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0118097;MQB=1.97881e-05;MQSB=0.0872883;RPB=0.702233;SGB=175.678;VDB=0.378681;EFF=INTRON(MODIFIER||||1703|LOC_Os01g26240|protein_coding|CODING|LOC_Os01g26240.1|1|1) FN425-S.SNP.1:14878619 chr01:014878619 0 W/14878619-14878619 FN425-S Single Base Substitution C-A INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN-52.SNP.1:14885665 chr01:014885665 0 W/14885665-14885665 FN-52 Single Base Substitution G-C INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN781-S.SNP.1:14886591 chr01:014886591 0 W/14886591-14886591 FN781-S Single Base Substitution C-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN343-S.SNP.1:14890051 chr01:014890051 0 W/14890051-14890051 FN343-S Single Base Substitution G-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN526-S.SNP.1:14896775 chr01:014896775 0 W/14896775-14896775 FN526-S Single Base Substitution A-T INTRON HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3993-S.SNP.1:14896827 chr01:014896827 0 W/14896827-14896827 FN3993-S SNP A -> T AC=2;AN=168;BQB=0.864183;DP=2269;DP4=1065,1093,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44138e-11;MQSB=0.640748;RPB=0.937696;SGB=44.0621;VDB=0.521429;EFF=INTRON(MODIFIER||||472|LOC_Os01g26280|protein_coding|CODING|LOC_Os01g26280.1|1|1) FN3913-S.SNP.1:14898466 chr01:014898466 0 W/14898466-14898466 FN3913-S SNP T -> A AC=1;AN=158;BQB=0.377516;DP=2315;DP4=1132,1106,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.68914e-05;MQSB=0.991912;RPB=0.998762;SGB=60.1755;VDB=0.1461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y303N|472|LOC_Os01g26280|protein_coding|CODING|LOC_Os01g26280.1|3|1) FN1414-S.SNP.1:14899900 chr01:014899900 0 W/14899900-14899900 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN-161.SNP.1:14909647 chr01:014909647 0 W/14909647-14909647 FN-161 Single Base Substitution A-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2429.SNP.1:14918043 chr01:014918043 0 W/14918043-14918043 FN2429 SNP G -> A AC=1;AN=200;BQB=0.669355;DP=5050;DP4=2751,1970,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17075e-08;MQSB=0.960344;RPB=0.82345;SGB=43.8747;VDB=0.940862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.1:14927163 chr01:014927163 0 W/14927163-14927163 FN-116 Single Base Substitution T-A INTRON HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN692-S.SNP.1:14928894 chr01:014928894 0 W/14928894-14928894 FN692-S Single Base Substitution G-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN3715-S.SNP.1:14932021 chr01:014932021 0 W/14932021-14932021 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.999437;DP=2553;DP4=1135,1321,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16963e-09;MQSB=0.995224;RPB=0.864778;SGB=50.3161;VDB=0.196638;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.1:14938847 chr01:014938847 0 W/14938847-14938847 FN4094-S SNP A -> G AC=1;AN=182;BQB=0.910225;DP=2763;DP4=1266,1425,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000361925;MQB=8.71214e-07;MQSB=0.0107476;RPB=0.948807;SGB=48.6223;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.1:14944125 chr01:014944125 0 W/14944125-14944125 FN424-S Single Base Substitution C-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN4046-S.SNP.1:14944444 chr01:014944444 0 W/14944444-14944444 FN4046-S SNP T -> A AC=1;AN=168;BQB=0.922877;DP=2603;DP4=1419,1106,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.96777e-05;MQSB=0.898904;RPB=0.437082;SGB=24.4556;VDB=0.888012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.1:14949943 chr01:014949943 0 W/14949943-14949943 FN1509-S Single Base Substitution A-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1047-S.SNP.1:14952885 chr01:014952885 0 W/14952885-14952885 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-222.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN-222 Single Base Substitution G-A INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1240-S.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN1240-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1340-S.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN1340-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3391-S.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN3391-S SNP G -> A AC=2;AN=184;BQB=0.804366;DP=2908;DP4=1402,1399,18,15;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=8.86181e-11;MQSB=0.172781;RPB=0.764815;SGB=106.184;VDB=0.59136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN3499-S SNP G -> A AC=2;AN=188;BQB=0.940684;DP=2626;DP4=1318,1249,4,12;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=9.56647e-09;MQSB=0.293284;RPB=0.903401;SGB=67.1521;VDB=0.168442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.1:14954797 chr01:014954797 0 W/14954797-14954797 FN3939-S SNP G -> A AC=2;AN=158;BQB=0.859939;DP=2299;DP4=1130,1092,8,5;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=0.000234054;MQSB=0.263104;RPB=0.672406;SGB=51.4366;VDB=0.644968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.1:14954828 chr01:014954828 0 W/14954828-14954828 FN-102 Single Base Substitution G-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2411.SNP.1:14956024 chr01:014956024 0 W/14956024-14956024 FN2411 SNP T -> C AC=1;AN=200;BQB=0.923287;DP=4191;DP4=2070,1824,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79688e-15;MQSB=0.891094;RPB=0.627839;SGB=114.132;VDB=0.820274;EFF=UTR_5_PRIME(MODIFIER||1780||124|LOC_Os01g26370|protein_coding|CODING|LOC_Os01g26370.1|1|1),INTRON(MODIFIER||||124|LOC_Os01g26370|protein_coding|CODING|LOC_Os01g26370.2|1|1) FN3918-S.SNP.1:14958815 chr01:014958815 0 W/14958815-14958815 FN3918-S SNP G -> A AC=1;AN=158;BQB=0.236561;DP=2507;DP4=1198,1150,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.09441e-06;MQSB=0.950288;RPB=0.735334;SGB=0.716704;VDB=0.515892;EFF=SPLICE_SITE_REGION(LOW||||124|LOC_Os01g26370|protein_coding|CODING|LOC_Os01g26370.2|4|1),UTR_3_PRIME(MODIFIER||637||124|LOC_Os01g26370|protein_coding|CODING|LOC_Os01g26370.1|1|1),UTR_3_PRIME(MODIFIER||637||124|LOC_Os01g26370|protein_coding|CODING|LOC_Os01g26370.2|4|1) FN2221-S.SNP.1:14961340 chr01:014961340 0 W/14961340-14961340 FN2221-S SNP C -> G AC=2;AN=190;BQB=0.994487;DP=4195;DP4=1820,1952,22,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31941e-24;MQSB=0.815181;RPB=0.887964;SGB=178.256;VDB=0.845724;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.1:14962819 chr01:014962819 0 W/14962819-14962819 FN-52 Single Base Substitution G-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN3650-S.SNP.1:14963186 chr01:014963186 0 W/14963186-14963186 FN3650-S SNP C -> T AC=1;AN=190;BQB=0.733134;DP=2579;DP4=1201,1291,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34737e-10;MQSB=0.983696;RPB=0.926573;SGB=31.3213;VDB=0.72439;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.1:14967737 chr01:014967737 0 W/14967737-14967737 FN4190-S SNP T -> A AC=1;AN=170;BQB=0.984734;DP=2356;DP4=1122,1152,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.79701e-07;MQSB=0.966577;RPB=0.267247;SGB=38.987;VDB=0.150505;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T670|690|LOC_Os01g26390|protein_coding|CODING|LOC_Os01g26390.1|7|1) FN4158-S.SNP.1:14967850 chr01:014967850 0 W/14967850-14967850 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.985192;DP=2526;DP4=1194,1261,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.19788e-07;MQSB=0.939654;RPB=0.890458;SGB=43.4296;VDB=0.0693858;EFF=UTR_3_PRIME(MODIFIER||50||690|LOC_Os01g26390|protein_coding|CODING|LOC_Os01g26390.1|7|1) FN1022-S.SNP.1:14968033 chr01:014968033 0 W/14968033-14968033 FN1022-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3494-S.SNP.1:14971539 chr01:014971539 0 W/14971539-14971539 FN3494-S SNP T -> A AC=1;AN=184;BQB=0.433303;DP=2717;DP4=1371,1234,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00176636;MQSB=0.988202;RPB=0.699062;SGB=39.699;VDB=0.551648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.1:14977031 chr01:014977031 0 W/14977031-14977031 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.997485;DP=4940;DP4=2328,2344,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08895e-05;MQSB=0.99914;RPB=0.233539;SGB=25.849;VDB=0.148491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.1:14977561 chr01:014977561 0 W/14977561-14977561 FN3918-S SNP G -> T AC=1;AN=158;BQB=0.951578;DP=2002;DP4=774,1171,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.57295e-05;MQSB=0.961267;RPB=0.983924;SGB=25.2211;VDB=0.640324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.1:14983816 chr01:014983816 0 W/14983816-14983816 FN2419 SNP G -> C AC=1;AN=200;BQB=0.147666;DP=3044;DP4=1681,1203,11,8;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.150788;MQB=0.276504;MQSB=0.000842305;RPB=0.877211;SGB=81.8956;VDB=0.134049;EFF=INTRON(MODIFIER||||169|LOC_Os01g26400|protein_coding|CODING|LOC_Os01g26400.1|1|1) FN3481-S.SNP.1:14984495 chr01:014984495 0 W/14984495-14984495 FN3481-S SNP C -> A AC=1;AN=184;BQB=0.957682;DP=3258;DP4=1605,1551,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.178023;MQB=0.810672;MQSB=0;RPB=0.750151;SGB=32.2261;VDB=0.769043;EFF=INTRON(MODIFIER||||169|LOC_Os01g26400|protein_coding|CODING|LOC_Os01g26400.1|1|1) FN4089-S.SNP.1:14988743 chr01:014988743 0 W/14988743-14988743 FN4089-S SNP T -> A AC=2;AN=182;BQB=0.993788;DP=3059;DP4=1583,1353,16,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.45526e-14;MQSB=0.99249;RPB=0.619133;SGB=116.285;VDB=0.742786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.1:14999276 chr01:014999276 0 W/14999276-14999276 FN2192-S SNP C -> A AC=2;AN=190;BQB=0.755079;DP=4180;DP4=2140,1777,25,17;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0270335;MQB=0.000204228;MQSB=0.91683;RPB=0.137155;SGB=185.712;VDB=0.179443;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.1:15003620 chr01:015003620 0 W/15003620-15003620 FN_N1-130-1 Single Base Substitution A-G HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3667-S.SNP.1:15012401 chr01:015012401 0 W/15012401-15012401 FN3667-S SNP T -> C AC=1;AN=190;BQB=0.858206;DP=2726;DP4=1128,1513,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0418195;MQB=0.890009;MQSB=0.508424;RPB=0.972184;SGB=58.2031;VDB=0.637461;EFF=INTRON(MODIFIER||||698|LOC_Os01g26940|protein_coding|CODING|LOC_Os01g26940.1|1|1) FN1465-S.SNP.1:15013902 chr01:015013902 0 W/15013902-15013902 FN1465-S Single Base Substitution T-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2619-S.SNP.1:15018789 chr01:015018789 0 W/15018789-15018789 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.291687;DP=4050;DP4=1942,1887,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.30003e-16;MQSB=0.800686;RPB=0.966307;SGB=136.856;VDB=0.856463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.1:15023299 chr01:015023299 0 W/15023299-15023299 FN3420-S SNP G -> A AC=2;AN=184;BQB=0.582441;DP=2592;DP4=1325,1051,12,5;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0.0316358;MQB=0.994523;MQSB=0.228176;RPB=0.701367;SGB=6.80232;VDB=0.740547;EFF=INTRON(MODIFIER||||321|LOC_Os01g26970|protein_coding|CODING|LOC_Os01g26970.1|2|1),INTRON(MODIFIER||||288|LOC_Os01g26970|protein_coding|CODING|LOC_Os01g26970.2|2|1),INTRON(MODIFIER||||258|LOC_Os01g26970|protein_coding|CODING|LOC_Os01g26970.3|2|1),INTRON(MODIFIER||||189|LOC_Os01g26970|protein_coding|CODING|LOC_Os01g26970.4|2|1),INTRON(MODIFIER||||355|LOC_Os01g26970|protein_coding|CODING|LOC_Os01g26970.5|2|1) FN3369-S.SNP.1:15027501 chr01:015027501 0 W/15027501-15027501 FN3369-S SNP C -> A AC=1;AN=184;BQB=0.899539;DP=4232;DP4=1776,2316,19,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00118147;MQB=4.69429e-14;MQSB=0.00152177;RPB=0.952774;SGB=106.184;VDB=0.802022;EFF=INTRON(MODIFIER||||1912|LOC_Os01g26980|protein_coding|CODING|LOC_Os01g26980.1|2|1) FN521-S.SNP.1:15038411 chr01:015038411 0 W/15038411-15038411 FN521-S Single Base Substitution C-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3797-S.SNP.1:15039073 chr01:015039073 0 W/15039073-15039073 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.835038;DP=2790;DP4=1202,1509,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000716846;MQB=0.000519398;MQSB=0.525189;RPB=0.933373;SGB=28.9929;VDB=0.0766077;EFF=INTRON(MODIFIER||||939|LOC_Os01g26990|protein_coding|CODING|LOC_Os01g26990.1|1|1) FN1099-S.SNP.1:15041399 chr01:015041399 0 W/15041399-15041399 FN1099-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3750-S.SNP.1:15042268 chr01:015042268 0 W/15042268-15042268 FN3750-S SNP T -> G AC=2;AN=190;BQB=0.749161;DP=2367;DP4=1068,1065,17,14;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0333756;MQB=0.750726;MQSB=0.00758958;RPB=0.853793;SGB=-42.1241;VDB=0.534595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1691T|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|5|1) FN-181.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN-181 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-257.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN-257 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN-377.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN-377 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-84.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN-84 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1319-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN1319-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1465-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN1465-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2136-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN2136-S SNP C -> G AC=2;AN=168;BQB=0.763502;DP=1754;DP4=932,771,14,11;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00342075;MQB=0.0118611;MQSB=0.637768;RPB=0.396806;SGB=75.9177;VDB=0.448903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1268H|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|4|1) FN2211-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN2211-S SNP C -> G AC=2;AN=190;BQB=0.880992;DP=4207;DP4=2135,1735,17,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000475398;MQB=6.78452e-12;MQSB=0.0160575;RPB=0.486787;SGB=121.957;VDB=0.765526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1268H|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|4|1) FN2462.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN2462 SNP C -> G AC=2;AN=200;BQB=0.691842;DP=4253;DP4=2161,1834,15,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000940513;MQB=1.29394e-12;MQSB=0.113423;RPB=0.831674;SGB=132.552;VDB=0.367884;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1268H|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|4|1) FN276-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN276-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3396-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN3396-S SNP C -> G AC=2;AN=184;BQB=0.944567;DP=3907;DP4=2019,1771,22,18;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000511902;MQB=2.69956e-18;MQSB=0.753299;RPB=0.978057;SGB=175.352;VDB=0.446171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1268H|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|4|1) FN3711-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN3711-S SNP C -> G AC=2;AN=190;BQB=0.91275;DP=2517;DP4=1396,1024,17,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.0011919;MQB=6.41806e-12;MQSB=0.992375;RPB=0.794916;SGB=121.957;VDB=0.323278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1268H|1735|LOC_Os01g27000|protein_coding|CODING|LOC_Os01g27000.1|4|1) FN515-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN515-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN747-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN747-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN799-S.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN799-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN_N1-169-1.SNP.1:15043653 chr01:015043653 0 W/15043653-15043653 FN_N1-169-1 Single Base Substitution C-G HET LOC_Os01g27000 retrotransposon protein, putative, unclassified, expressed SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN708-S.SNP.1:15061381 chr01:015061381 0 W/15061381-15061381 FN708-S Single Base Substitution C-A INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1465-S.SNP.1:15091786 chr01:015091786 0 W/15091786-15091786 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3759-S.SNP.1:15097950 chr01:015097950 0 W/15097950-15097950 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.995584;DP=2203;DP4=989,1113,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000453926;MQB=6.06918e-05;MQSB=0.94774;RPB=0.973604;SGB=39.9877;VDB=0.913584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.1:15099786 chr01:015099786 0 W/15099786-15099786 FN3286-S SNP C -> A AC=1;AN=184;BQB=0.783811;DP=2780;DP4=1444,1247,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.130935;MQB=0.235212;MQSB=0;RPB=0.321145;SGB=75.8731;VDB=0.78761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.1:15127295 chr01:015127295 0 W/15127295-15127295 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.414902;DP=4832;DP4=2315,2280,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000413907;MQB=5.33599e-15;MQSB=0.924922;RPB=0.695493;SGB=76.3213;VDB=0.178554;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.1:15127296 chr01:015127296 0 W/15127296-15127296 FN2668-S SNP C -> A AC=1;AN=200;BQB=0.675939;DP=4828;DP4=2389,2240,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00041425;MQB=4.21255e-16;MQSB=0.99766;RPB=0.97374;SGB=52.9314;VDB=0.306251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.1:15139921 chr01:015139921 0 W/15139921-15139921 FN2172-S SNP T -> C AC=1;AN=168;BQB=0.0304784;DP=3310;DP4=2026,1242,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.65899e-06;MQSB=0.96714;RPB=0.98666;SGB=-108.641;VDB=0.0648329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.1:15140998 chr01:015140998 0 W/15140998-15140998 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.45747;DP=4019;DP4=1992,1748,1,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000146556;MQSB=0.365048;RPB=0.999647;SGB=16.3688;VDB=0.297748;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.1:15151650 chr01:015151650 0 W/15151650-15151650 FN4314-S SNP C -> T AC=2;AN=170;BQB=0.998269;DP=2686;DP4=1279,1302,17,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.42607e-20;MQSB=0.957161;RPB=0.739927;SGB=114.059;VDB=0.264761;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S691|746|LOC_Os01g27160|protein_coding|CODING|LOC_Os01g27160.1|17|1) FN2451.SNP.1:15152499 chr01:015152499 0 W/15152499-15152499 FN2451 SNP G -> T AC=2;AN=200;BQB=0.932177;DP=4601;DP4=2165,2151,28,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.05574e-32;MQSB=0.999669;RPB=0.299031;SGB=141.507;VDB=0.759663;EFF=UTR_3_PRIME(MODIFIER||16||808|LOC_Os01g27170|protein_coding|CODING|LOC_Os01g27170.1|6|1),UTR_3_PRIME(MODIFIER||509||746|LOC_Os01g27160|protein_coding|CODING|LOC_Os01g27160.1|18|1) FN3906-S.SNP.1:15156472 chr01:015156472 0 W/15156472-15156472 FN3906-S SNP T -> C AC=1;AN=158;BQB=0.911215;DP=2581;DP4=1181,1338,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.30962e-05;MQSB=0.998312;RPB=0.790191;SGB=29.5899;VDB=0.387294;EFF=INTRON(MODIFIER||||808|LOC_Os01g27170|protein_coding|CODING|LOC_Os01g27170.1|1|1) FN1237-S.SNP.1:15160551 chr01:015160551 0 W/15160551-15160551 FN1237-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g27190 C2 domain containing protein, putative, expressed SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2751-S.SNP.1:15161667 chr01:015161667 0 W/15161667-15161667 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.99062;DP=4260;DP4=1801,2079,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50563e-09;MQSB=0.998417;RPB=0.267987;SGB=11.0951;VDB=0.0786466;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.1:15161941 chr01:015161941 0 W/15161941-15161941 FN-94 Single Base Substitution C-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN3941-S.SNP.1:15168360 chr01:015168360 0 W/15168360-15168360 FN3941-S SNP C -> A AC=1;AN=168;BQB=0.742775;DP=2501;DP4=1144,1216,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.26146e-06;MQSB=0.94389;RPB=0.842601;SGB=14.8923;VDB=0.982134;EFF=INTRON(MODIFIER||||267|LOC_Os01g27200|protein_coding|CODING|LOC_Os01g27200.1|1|1) FN276-S.SNP.1:15168726 chr01:015168726 0 W/15168726-15168726 FN276-S Single Base Substitution G-C INTRON HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3508-S.SNP.1:15170970 chr01:015170970 0 W/15170970-15170970 FN3508-S SNP C -> G AC=2;AN=188;BQB=0.996533;DP=3637;DP4=1301,2250,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.85318e-19;MQSB=0.957103;RPB=0.906967;SGB=139.845;VDB=0.362422;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L107|240|LOC_Os01g27210|protein_coding|CODING|LOC_Os01g27210.1|3|1) W607-2-1.SNP.1:15170970 chr01:015170970 0 W/15170970-15170970 W607-2-1 Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2611-S.SNP.1:15177073 chr01:015177073 0 W/15177073-15177073 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.631354;DP=4930;DP4=2448,2219,10,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00365112;MQB=7.0265e-06;MQSB=1.81834e-08;RPB=0.487592;SGB=100.316;VDB=0.0640417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.1:15179112 chr01:015179112 0 W/15179112-15179112 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.201523;DP=2873;DP4=1554,972,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.21014e-06;MQSB=0.00244341;RPB=0.964382;SGB=21.559;VDB=0.189882;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.1:15180475 chr01:015180475 0 W/15180475-15180475 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.857311;DP=2325;DP4=1167,640,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.82596e-07;MQSB=0.783783;RPB=0.854251;SGB=2.88981;VDB=0.190363;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.1:15182094 chr01:015182094 0 W/15182094-15182094 FN-316 Single Base Substitution T-C INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2629-S.SNP.1:15189797 chr01:015189797 0 W/15189797-15189797 FN2629-S SNP T -> G AC=1;AN=200;BQB=0.730602;DP=4783;DP4=2099,2494,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72975e-15;MQSB=0.846408;RPB=0.230331;SGB=104.921;VDB=0.871199;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.1:15195189 chr01:015195189 0 W/15195189-15195189 FN495-S Single Base Substitution C-A INTRON HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN4203-S.SNP.1:15198651 chr01:015198651 0 W/15198651-15198651 FN4203-S SNP G -> T AC=1;AN=170;BQB=0.60692;DP=2745;DP4=1140,1526,8,16;HOB=6.92042e-05;ICB=0.000139222;MQ=14;MQ0F=0.398179;MQB=0.38608;MQSB=0;RPB=0.204007;SGB=44.3104;VDB=0.0670201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F1516L|1646|LOC_Os01g27250|protein_coding|CODING|LOC_Os01g27250.1|11|1) FN4203-S.SNP.1:15198652 chr01:015198652 0 W/15198652-15198652 FN4203-S SNP A -> T AC=1;AN=170;BQB=0.848908;DP=2745;DP4=1129,1521,11,14;HOB=6.92042e-05;ICB=0.000139222;MQ=14;MQ0F=0.400364;MQB=0.0643852;MQSB=0;RPB=0.0408773;SGB=105.627;VDB=0.0725925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F1516Y|1646|LOC_Os01g27250|protein_coding|CODING|LOC_Os01g27250.1|11|1) FN2489.SNP.1:15209941 chr01:015209941 0 W/15209941-15209941 FN2489 SNP G -> A AC=1;AN=200;BQB=0.0319249;DP=4632;DP4=2210,1922,8,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000215889;MQB=2.22204e-11;MQSB=0.0100011;RPB=0.997503;SGB=-314.27;VDB=0.76473;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.1:15211887 chr01:015211887 0 W/15211887-15211887 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.998086;DP=4897;DP4=2493,2122,20,13;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0112314;MQB=0.0641748;MQSB=0.580087;RPB=0.89618;SGB=146.368;VDB=0.901025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3937-S.SNP.1:15212172 chr01:015212172 0 W/15212172-15212172 FN3937-S SNP A -> G AC=1;AN=158;BQB=0.998779;DP=2409;DP4=1100,1138,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00456621;MQB=0.00312096;MQSB=0.203516;RPB=0.947219;SGB=51.4366;VDB=0.638536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.1:15213687 chr01:015213687 0 W/15213687-15213687 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.406538;DP=3595;DP4=1673,1459,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00194715;MQB=0.0476056;MQSB=0.00299235;RPB=0.347039;SGB=29.3637;VDB=0.46761;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.1:15219485 chr01:015219485 0 W/15219485-15219485 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.624515;DP=2419;DP4=1216,1147,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00289376;MQB=0.000487552;MQSB=0.0669216;RPB=0.992204;SGB=38.987;VDB=0.617376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.1:15221256 chr01:015221256 0 W/15221256-15221256 FN2495 SNP C -> T AC=2;AN=200;BQB=0.969942;DP=4459;DP4=2002,2175,15,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000224266;MQB=5.7799e-17;MQSB=0.267405;RPB=0.190803;SGB=127.947;VDB=0.627625;EFF=INTRON(MODIFIER||||267|LOC_Os01g27270|protein_coding|CODING|LOC_Os01g27270.1|1|1) FN1045-S.SNP.1:15221410 chr01:015221410 0 W/15221410-15221410 FN1045-S Single Base Substitution G-A INTRON HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3629-S.SNP.1:15225200 chr01:015225200 0 W/15225200-15225200 FN3629-S SNP C -> T AC=1;AN=190;BQB=0.99099;DP=2952;DP4=1386,1454,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.26275e-12;MQSB=0.717792;RPB=0.809131;SGB=80.9724;VDB=0.518255;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P242|932|LOC_Os01g27280|protein_coding|CODING|LOC_Os01g27280.1|3|1) FN1561-S.SNP.1:15232696 chr01:015232696 0 W/15232696-15232696 FN1561-S Single Base Substitution A-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3665-S.SNP.1:15232855 chr01:015232855 0 W/15232855-15232855 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.863494;DP=2630;DP4=1296,1261,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50111e-09;MQSB=0.956868;RPB=0.923622;SGB=53.8699;VDB=0.107123;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.1:15236785 chr01:015236785 0 W/15236785-15236785 FN-164 Single Base Substitution A-T INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2325.SNP.1:15240848 chr01:015240848 0 W/15240848-15240848 FN2325 SNP T -> G AC=1;AN=192;BQB=0.0383006;DP=4946;DP4=2270,2384,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00303275;MQB=8.56513e-06;MQSB=0.618177;RPB=0.510229;SGB=39.78;VDB=0.962638;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.1:15242645 chr01:015242645 0 W/15242645-15242645 FN4073-S SNP G -> C AC=1;AN=182;BQB=0.893681;DP=2878;DP4=1550,1270,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=28;MQ0F=0.23697;MQB=0.731413;MQSB=0;RPB=0.981251;SGB=35.0899;VDB=0.139876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.1:15242772 chr01:015242772 0 W/15242772-15242772 FN2779-S SNP G -> T AC=1;AN=198;BQB=0.821493;DP=4493;DP4=2313,1930,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00244825;MQB=4.74523e-06;MQSB=0.06448;RPB=0.167739;SGB=60.4858;VDB=0.221204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.1:15246826 chr01:015246826 0 W/15246826-15246826 FN3532-S SNP G -> T AC=1;AN=188;BQB=0.940131;DP=3022;DP4=1479,1492,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0900066;MQB=0.972168;MQSB=6.94524e-05;RPB=0.607551;SGB=94.4119;VDB=0.0845166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P805Q|1261|LOC_Os01g27320|protein_coding|CODING|LOC_Os01g27320.1|5|1) FN494-S.SNP.1:15247579 chr01:015247579 0 W/15247579-15247579 FN494-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g27320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN494-S.SNP.1:15248113 chr01:015248113 0 W/15248113-15248113 FN494-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g27320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN2573-S.SNP.1:15249498 chr01:015249498 0 W/15249498-15249498 FN2573-S SNP A -> T AC=1;AN=198;BQB=0.876527;DP=4469;DP4=2139,2130,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0140971;MQB=0.0120096;MQSB=0.00327747;RPB=0.971486;SGB=26.5745;VDB=0.288754;EFF=INTRON(MODIFIER||||1261|LOC_Os01g27320|protein_coding|CODING|LOC_Os01g27320.1|3|1) FN2532-S.SNP.1:15250914 chr01:015250914 0 W/15250914-15250914 FN2532-S SNP G -> A AC=2;AN=198;BQB=0.916322;DP=4367;DP4=2206,1937,21,18;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0.02267;MQB=3.23063e-05;MQSB=0.37206;RPB=0.423128;SGB=173.617;VDB=0.671486;EFF=INTRON(MODIFIER||||1261|LOC_Os01g27320|protein_coding|CODING|LOC_Os01g27320.1|2|1) FN2257-S.SNP.1:15252795 chr01:015252795 0 W/15252795-15252795 FN2257-S SNP T -> C AC=1;AN=190;BQB=0.845679;DP=4978;DP4=2707,2009,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.112696;MQB=0.0115365;MQSB=0;RPB=0.622387;SGB=61.9679;VDB=0.33397;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.1:15253627 chr01:015253627 0 W/15253627-15253627 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.997882;DP=2791;DP4=1453,1245,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=6.68478e-08;MQSB=0.077694;RPB=0.530022;SGB=62.7569;VDB=0.590679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H125Y|152|LOC_Os01g27330|protein_coding|CODING|LOC_Os01g27330.1|2|1) FN2126-S.SNP.1:15254886 chr01:015254886 0 W/15254886-15254886 FN2126-S SNP C -> G AC=1;AN=168;BQB=0.547004;DP=3071;DP4=1631,1408,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9913e-05;MQSB=0.985623;RPB=0.934659;SGB=-17.5266;VDB=0.0965275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K8N|152|LOC_Os01g27330|protein_coding|CODING|LOC_Os01g27330.1|1|1) FN3293-S.SNP.1:15257372 chr01:015257372 0 W/15257372-15257372 FN3293-S SNP G -> A AC=1;AN=184;BQB=0.938472;DP=2688;DP4=1116,1459,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64218e-05;MQSB=0.975827;RPB=0.98687;SGB=25.1826;VDB=0.840211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.1:15263429 chr01:015263429 0 W/15263429-15263429 FN1508-S Single Base Substitution G-C INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3998-S.SNP.1:15264281 chr01:015264281 0 W/15264281-15264281 FN3998-S SNP A -> G AC=2;AN=168;BQB=0.798062;DP=2453;DP4=1225,1154,8,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.95426e-09;MQSB=0.879464;RPB=0.983353;SGB=61.0344;VDB=0.986914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.1:15265143 chr01:015265143 0 W/15265143-15265143 FN2307 SNP G -> A AC=1;AN=192;BQB=0.0802232;DP=4354;DP4=1997,2056,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.66474e-11;MQSB=0.014996;RPB=0.980902;SGB=86.1165;VDB=0.957538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.1:15268331 chr01:015268331 0 W/15268331-15268331 FN1535-S Single Base Substitution T-C INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1472-S.SNP.1:15270616 chr01:015270616 0 W/15270616-15270616 FN1472-S Single Base Substitution C-T INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2555-S.SNP.1:15285239 chr01:015285239 0 W/15285239-15285239 FN2555-S SNP C -> T AC=2;AN=198;BQB=0.812007;DP=4434;DP4=2024,2176,18,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.88684e-23;MQSB=0.965702;RPB=0.999591;SGB=81.2467;VDB=0.340922;EFF=INTRON(MODIFIER||||212|LOC_Os01g27370|protein_coding|CODING|LOC_Os01g27370.1|1|1) FN1697-S.SNP.1:15288532 chr01:015288532 0 W/15288532-15288532 FN1697-S SNP T -> A AC=1;AN=188;BQB=0.144309;DP=3985;DP4=1803,2140,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02655e-10;MQSB=0.975833;RPB=0.625656;SGB=41.3359;VDB=0.89541;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.1:15293916 chr01:015293916 0 W/15293916-15293916 FN680-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g27390 glutathione S-transferase, putative, expressed SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1042-S.SNP.1:15304493 chr01:015304493 0 W/15304493-15304493 FN1042-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g27420 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1108-S.SNP.1:15309924 chr01:015309924 0 W/15309924-15309924 FN1108-S Single Base Substitution C-T INTRON HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3822-S.SNP.1:15312332 chr01:015312332 0 W/15312332-15312332 FN3822-S SNP C -> T AC=2;AN=190;BQB=0.987685;DP=3833;DP4=1988,1706,14,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.7179e-21;MQSB=0.991363;RPB=0.922927;SGB=74.7373;VDB=0.630535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A512V|634|LOC_Os01g27430|protein_coding|CODING|LOC_Os01g27430.1|5|1) FN2218-S.SNP.1:15313985 chr01:015313985 0 W/15313985-15313985 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.582747;DP=2669;DP4=1250,1270,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0146122;MQB=0.298988;MQSB=4.58044e-20;RPB=0.819203;SGB=8.33661;VDB=0.717818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.1:15318816 chr01:015318816 0 W/15318816-15318816 FN2417 SNP T -> A AC=1;AN=200;BQB=0.380854;DP=4694;DP4=2035,2348,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24342e-10;MQSB=0.983356;RPB=0.969275;SGB=32.0901;VDB=0.729744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T616S|1127|LOC_Os01g27440|protein_coding|CODING|LOC_Os01g27440.1|7|1) FN1319-S.SNP.1:15319021 chr01:015319021 0 W/15319021-15319021 FN1319-S Single Base Substitution G-T INTRON HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN-215.SNP.1:15320988 chr01:015320988 0 W/15320988-15320988 FN-215 Single Base Substitution G-A INTRON HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN552-S.SNP.1:15321121 chr01:015321121 0 W/15321121-15321121 FN552-S Single Base Substitution G-T INTRON HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2481.SNP.1:15321358 chr01:015321358 0 W/15321358-15321358 FN2481 SNP T -> C AC=2;AN=200;BQB=0.718442;DP=4234;DP4=1892,1981,13,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.8673e-13;MQSB=0.999229;RPB=0.486257;SGB=-70.864;VDB=0.415989;EFF=INTRON(MODIFIER||||1127|LOC_Os01g27440|protein_coding|CODING|LOC_Os01g27440.1|3|1) FN945-S.SNP.1:15325056 chr01:015325056 0 W/15325056-15325056 FN945-S Single Base Substitution T-C INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN3659-S.SNP.1:15327594 chr01:015327594 0 W/15327594-15327594 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.996679;DP=2885;DP4=1415,1346,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.88728e-07;MQSB=0.999344;RPB=0.419973;SGB=36.1006;VDB=0.441271;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.1:15335726 chr01:015335726 0 W/15335726-15335726 FN904-S Single Base Substitution G-T INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2690-S.SNP.1:15339933 chr01:015339933 0 W/15339933-15339933 FN2690-S SNP G -> A AC=2;AN=200;BQB=0.929507;DP=4384;DP4=1981,2097,9,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.96946e-17;MQSB=0.213192;RPB=0.914091;SGB=137.158;VDB=0.41517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.1:15339934 chr01:015339934 0 W/15339934-15339934 FN2690-S SNP A -> G AC=2;AN=200;BQB=0.826696;DP=4390;DP4=2012,2115,12,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.80639e-15;MQSB=0.224735;RPB=0.888913;SGB=73.7728;VDB=0.364451;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.1:15341423 chr01:015341423 0 W/15341423-15341423 FN2139-S SNP C -> G AC=2;AN=168;BQB=0.791388;DP=4295;DP4=2210,2015,27,30;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.141793;MQB=0.938995;MQSB=5.79645e-23;RPB=0.261894;SGB=62.8542;VDB=0.4966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.1:15359468 chr01:015359468 0 W/15359468-15359468 FN2324 SNP A -> T AC=1;AN=192;BQB=0.987092;DP=5205;DP4=2651,2273,9,26;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.1414e-18;MQSB=0.220508;RPB=0.993725;SGB=75.0722;VDB=0.707895;EFF=INTRON(MODIFIER||||559|LOC_Os01g27520|protein_coding|CODING|LOC_Os01g27520.1|1|1),INTRON(MODIFIER||||438|LOC_Os01g27520|protein_coding|CODING|LOC_Os01g27520.2|1|1) FN-252.SNP.1:15365538 chr01:015365538 0 W/15365538-15365538 FN-252 Single Base Substitution C-A INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN3520-S.SNP.1:15366151 chr01:015366151 0 W/15366151-15366151 FN3520-S SNP A -> T AC=2;AN=188;BQB=0.309006;DP=2699;DP4=1187,1438,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.6821e-14;MQSB=0.948277;RPB=0.16624;SGB=117.48;VDB=0.712736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.1:15371014 chr01:015371014 0 W/15371014-15371014 FN2447 SNP T -> C AC=2;AN=200;BQB=0.556359;DP=4308;DP4=1938,1979,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000464253;MQB=1.87165e-19;MQSB=0.141685;RPB=0.793056;SGB=48.014;VDB=0.896826;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.1:15377433 chr01:015377433 0 W/15377433-15377433 FN3885-S SNP C -> A AC=2;AN=158;BQB=0.972488;DP=2656;DP4=1170,1325,19,28;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=6.75417e-24;MQSB=0.185733;RPB=0.0466382;SGB=199.998;VDB=0.263946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.1:15379999 chr01:015379999 0 W/15379999-15379999 FN1297-S Single Base Substitution A-G INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2751-S.SNP.1:15381653 chr01:015381653 0 W/15381653-15381653 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.0901249;DP=4624;DP4=2196,2171,5,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00259516;MQB=2.15934e-08;MQSB=0.695326;RPB=0.963615;SGB=-12.5051;VDB=0.507369;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S110|228|LOC_Os01g27560|protein_coding|CODING|LOC_Os01g27560.1|2|1) FN848-S.SNP.1:15385701 chr01:015385701 0 W/15385701-15385701 FN848-S Single Base Substitution A-G INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3431-S.SNP.1:15386352 chr01:015386352 0 W/15386352-15386352 FN3431-S SNP G -> A AC=1;AN=184;BQB=0.947622;DP=2939;DP4=1329,1534,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81531e-05;MQSB=0.970011;RPB=0.179985;SGB=18.1394;VDB=0.519034;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.1:15396750 chr01:015396750 0 W/15396750-15396750 FN466-S Single Base Substitution T-C INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1268-S.SNP.1:15412168 chr01:015412168 0 W/15412168-15412168 FN1268-S Single Base Substitution T-C INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN760-S.SNP.1:15412690 chr01:015412690 0 W/15412690-15412690 FN760-S Single Base Substitution C-A INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1461-S.SNP.1:15416845 chr01:015416845 0 W/15416845-15416845 FN1461-S Single Base Substitution G-T INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1307-S.SNP.1:15420954 chr01:015420954 0 W/15420954-15420954 FN1307-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN3387-S.SNP.1:15426404 chr01:015426404 0 W/15426404-15426404 FN3387-S SNP G -> C AC=1;AN=184;BQB=0.985593;DP=2337;DP4=993,1276,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.524e-05;MQSB=0.646061;RPB=0.248979;SGB=21.6609;VDB=0.54069;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.1:15427833 chr01:015427833 0 W/15427833-15427833 FN3675-S SNP A -> G AC=1;AN=190;BQB=0.952135;DP=2672;DP4=1336,1215,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00561377;MQB=0.00566137;MQSB=0.927695;RPB=0.513502;SGB=64.5316;VDB=0.4567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V580A|791|LOC_Os01g27660|protein_coding|CODING|LOC_Os01g27660.1|5|1) FN1494-S.SNP.1:15429282 chr01:015429282 0 W/15429282-15429282 FN1494-S Single Base Substitution G-C INTRON HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2577-S.SNP.1:15429679 chr01:015429679 0 W/15429679-15429679 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.501376;DP=4226;DP4=1845,2201,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00023663;MQB=1.57434e-05;MQSB=0.999801;RPB=0.610383;SGB=25.7687;VDB=0.152536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A274T|791|LOC_Os01g27660|protein_coding|CODING|LOC_Os01g27660.1|2|1) FN-74.SNP.1:15432958 chr01:015432958 0 W/15432958-15432958 FN-74 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g27670 transposon protein, putative, CACTA, En/Spm sub-class SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN805-S.SNP.1:15433026 chr01:015433026 0 W/15433026-15433026 FN805-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g27670 transposon protein, putative, CACTA, En/Spm sub-class SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2224-S.SNP.1:15434127 chr01:015434127 0 W/15434127-15434127 FN2224-S SNP G -> C AC=1;AN=190;BQB=0.539792;DP=4885;DP4=2317,2313,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204708;MQB=3.42128e-11;MQSB=0.513482;RPB=0.92779;SGB=85.8548;VDB=0.960085;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L272|865|LOC_Os01g27670|protein_coding|CODING|LOC_Os01g27670.1|1|1) FN3714-S.SNP.1:15443981 chr01:015443981 0 W/15443981-15443981 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.968329;DP=3070;DP4=1750,1245,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00358306;MQB=0.0034809;MQSB=0;RPB=0.886475;SGB=32.5467;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.1:15448311 chr01:015448311 0 W/15448311-15448311 FN-133 Single Base Substitution C-A INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN1057-S.SNP.1:15464270 chr01:015464270 0 W/15464270-15464270 FN1057-S Single Base Substitution A-G INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1072-S.SNP.1:15467054 chr01:015467054 0 W/15467054-15467054 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2774-S.SNP.1:15479117 chr01:015479117 0 W/15479117-15479117 FN2774-S SNP T -> A AC=1;AN=198;BQB=0.538689;DP=4256;DP4=1965,2062,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.07885e-08;MQSB=0.967721;RPB=0.887459;SGB=49.5489;VDB=0.991491;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.1:15486396 chr01:015486396 0 W/15486396-15486396 FN-409 Single Base Substitution C-A INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-169.SNP.1:15490895 chr01:015490895 0 W/15490895-15490895 FN-169 Single Base Substitution T-G INTRON HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-174.SNP.1:15491295 chr01:015491295 0 W/15491295-15491295 FN-174 Single Base Substitution A-T INTRON HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3280-S.SNP.1:15509372 chr01:015509372 0 W/15509372-15509372 FN3280-S SNP A -> T AC=1;AN=184;BQB=0.517026;DP=2680;DP4=1343,1214,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00492415;MQSB=0.991485;RPB=0.311018;SGB=35.1773;VDB=0.0588087;EFF=INTRON(MODIFIER||||510|LOC_Os01g27770|protein_coding|CODING|LOC_Os01g27770.1|4|1) FN-153.SNP.1:15519880 chr01:015519880 0 W/15519880-15519880 FN-153 Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1682-S.SNP.1:15522155 chr01:015522155 0 W/15522155-15522155 FN1682-S SNP C -> G AC=1;AN=188;BQB=0.312474;DP=1402;DP4=772,579,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000174748;MQSB=0.100621;RPB=0.988267;SGB=26.2637;VDB=0.866441;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L1344|1726|LOC_Os01g27790|protein_coding|CODING|LOC_Os01g27790.1|7|1) FN-168.SNP.1:15523040 chr01:015523040 0 W/15523040-15523040 FN-168 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g27790 retrotransposon protein, putative, unclassified, expressed SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2451.SNP.1:15523308 chr01:015523308 0 W/15523308-15523308 FN2451 SNP A -> G AC=2;AN=200;BQB=0.0903476;DP=5169;DP4=1976,2652,25,25;HOB=0.0198;ICB=0.495051;MQ=29;MQ0F=0.0882182;MQB=0.145934;MQSB=1.32622e-39;RPB=0.908093;SGB=60.8554;VDB=0.423464;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E1699|1726|LOC_Os01g27790|protein_coding|CODING|LOC_Os01g27790.1|9|1) FN1371-S.SNP.1:15527524 chr01:015527524 0 W/15527524-15527524 FN1371-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g27800 retrotransposon protein, putative, unclassified, expressed SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3546-S.SNP.1:15528530 chr01:015528530 0 W/15528530-15528530 FN3546-S SNP G -> T AC=1;AN=188;BQB=0.433577;DP=2364;DP4=1194,1004,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0283418;MQB=0.783734;MQSB=9.49335e-07;RPB=0.844429;SGB=-17.1729;VDB=0.409934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.1:15534798 chr01:015534798 0 W/15534798-15534798 FN2607-S SNP A -> T AC=1;AN=198;BQB=0.612365;DP=4223;DP4=1967,2022,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.73566e-10;MQSB=0.995143;RPB=0.641628;SGB=67.9293;VDB=0.185486;EFF=INTRON(MODIFIER||||69|LOC_Os01g27820|protein_coding|CODING|LOC_Os01g27820.1|1|1) FN3707-S.SNP.1:15536148 chr01:015536148 0 W/15536148-15536148 FN3707-S SNP A -> T AC=2;AN=190;BQB=0.852438;DP=2268;DP4=1271,728,15,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45813e-09;MQSB=0.968975;RPB=0.788811;SGB=64.5316;VDB=0.356679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.1:15540957 chr01:015540957 0 W/15540957-15540957 FN3529-S SNP T -> C AC=1;AN=188;BQB=0.899858;DP=3630;DP4=1843,1690,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.79704e-08;MQSB=0.92456;RPB=0.0544726;SGB=48.979;VDB=0.0891378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.1:15551962 chr01:015551962 0 W/15551962-15551962 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2352.SNP.1:15555166 chr01:015555166 0 W/15555166-15555166 FN2352 SNP G -> A AC=2;AN=192;BQB=0.945232;DP=4656;DP4=2299,2016,21,20;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.00794674;MQB=0.748426;MQSB=1.35727e-05;RPB=0.362476;SGB=90.4583;VDB=0.649516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.1:15556520 chr01:015556520 0 W/15556520-15556520 FN3571-S SNP C -> A AC=2;AN=188;BQB=0.938738;DP=4143;DP4=2162,1837,29,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000482742;MQB=2.95462e-23;MQSB=0.432703;RPB=0.818046;SGB=189.821;VDB=0.728542;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.1:15556535 chr01:015556535 0 W/15556535-15556535 FN3292-S SNP A -> G AC=2;AN=184;BQB=0.591191;DP=3966;DP4=1872,1856,25,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000504286;MQB=9.64817e-18;MQSB=0.706873;RPB=0.985281;SGB=-48.1856;VDB=0.315313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.1:15556634 chr01:015556634 0 W/15556634-15556634 FN1097-S Single Base Substitution T-C INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3705-S.SNP.1:15557153 chr01:015557153 0 W/15557153-15557153 FN3705-S SNP G -> A AC=2;AN=190;BQB=0.940288;DP=2541;DP4=1083,1330,19,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30636e-17;MQSB=0.929819;RPB=0.99429;SGB=121.394;VDB=0.290674;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R14|143|LOC_Os01g27850|protein_coding|CODING|LOC_Os01g27850.1|1|1) FN2794-S.SNP.1:15558380 chr01:015558380 0 W/15558380-15558380 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.335471;DP=3768;DP4=2214,1340,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.0641e-06;MQSB=0.481968;RPB=0.988691;SGB=1.37381;VDB=0.45262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.1:15559298 chr01:015559298 0 W/15559298-15559298 FN2213-S SNP A -> G AC=2;AN=190;BQB=0.312673;DP=4800;DP4=2494,1887,33,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.9958e-29;MQSB=0.382636;RPB=0.995415;SGB=226.696;VDB=0.100619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.1:15563453 chr01:015563453 0 W/15563453-15563453 FN1112-S Single Base Substitution A-T INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3848-S.SNP.1:15564551 chr01:015564551 0 W/15564551-15564551 FN3848-S SNP A -> G AC=2;AN=158;BQB=0.980643;DP=2388;DP4=1157,1080,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.50146e-16;MQSB=0.887042;RPB=0.990547;SGB=116.978;VDB=0.873894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.1:15567642 chr01:015567642 0 W/15567642-15567642 FN2239-S SNP G -> T AC=1;AN=190;BQB=0.0596899;DP=4775;DP4=2158,2162,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90568e-13;MQSB=0.4391;RPB=0.97953;SGB=19.6499;VDB=0.00271185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.1:15567643 chr01:015567643 0 W/15567643-15567643 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.873639;DP=4761;DP4=2150,2220,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.5483e-14;MQSB=0.374489;RPB=0.888652;SGB=46.6446;VDB=0.000619834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.1:15567644 chr01:015567644 0 W/15567644-15567644 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.923328;DP=4742;DP4=2156,2244,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.45979e-13;MQSB=0.397277;RPB=0.706994;SGB=18.096;VDB=0.0052484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:15572817 chr01:015572817 0 W/15572817-15572817 FN2725-S SNP C -> T AC=2;AN=200;BQB=0.973607;DP=4919;DP4=2056,2609,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000203293;MQB=5.42347e-24;MQSB=0.721966;RPB=0.55538;SGB=99.8245;VDB=0.727613;EFF=INTRON(MODIFIER||||423|LOC_Os01g27880|protein_coding|CODING|LOC_Os01g27880.1|1|1) FN2403.SNP.1:15580472 chr01:015580472 0 W/15580472-15580472 FN2403 SNP A -> C AC=1;AN=200;BQB=0.84965;DP=5200;DP4=2634,2278,13,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000961538;MQB=4.62612e-08;MQSB=0.923383;RPB=0.992778;SGB=47.7211;VDB=0.376778;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.1:15582490 chr01:015582490 0 W/15582490-15582490 FN825-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g27890 cytochrome P450, putative, expressed SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3591-S.SNP.1:15597064 chr01:015597064 0 W/15597064-15597064 FN3591-S SNP C -> T AC=2;AN=188;BQB=0.969211;DP=2830;DP4=1474,1279,16,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00388693;MQB=1.91503e-17;MQSB=0.138884;RPB=0.66635;SGB=113.937;VDB=0.654699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.1:15605421 chr01:015605421 0 W/15605421-15605421 FN3431-S SNP C -> G AC=1;AN=184;BQB=0.984963;DP=3049;DP4=1530,1450,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.01805e-05;MQSB=0.000322498;RPB=0.960808;SGB=35.1773;VDB=0.857718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.1:15612443 chr01:015612443 0 W/15612443-15612443 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.778033;DP=3700;DP4=1758,1828,15,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.99217e-15;MQSB=0.929319;RPB=0.381442;SGB=95.6183;VDB=0.53873;EFF=INTRON(MODIFIER||||774|LOC_Os01g27930|protein_coding|CODING|LOC_Os01g27930.1|3|1) FN4139-S.SNP.1:15616056 chr01:015616056 0 W/15616056-15616056 FN4139-S SNP G -> T AC=2;AN=170;BQB=0.948753;DP=2628;DP4=1249,1283,22,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.79213e-22;MQSB=0.998881;RPB=0.87742;SGB=181.152;VDB=0.460732;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.1:15619941 chr01:015619941 0 W/15619941-15619941 FN989-S Single Base Substitution A-T INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2629-S.SNP.1:15621290 chr01:015621290 0 W/15621290-15621290 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.937163;DP=5459;DP4=2624,2556,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48717e-13;MQSB=0.79165;RPB=0.547101;SGB=65.5058;VDB=0.04999;EFF=INTRON(MODIFIER||||427|LOC_Os01g27940|protein_coding|CODING|LOC_Os01g27940.1|3|1),INTRON(MODIFIER||||372|LOC_Os01g27940|protein_coding|CODING|LOC_Os01g27940.2|2|1) FN260-S.SNP.1:15630182 chr01:015630182 0 W/15630182-15630182 FN260-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g27950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN705-S.SNP.1:15635508 chr01:015635508 0 W/15635508-15635508 FN705-S Single Base Substitution G-A INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN1113-S.SNP.1:15637375 chr01:015637375 0 W/15637375-15637375 FN1113-S Single Base Substitution A-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2212-S.SNP.1:15646327 chr01:015646327 0 W/15646327-15646327 FN2212-S SNP A -> C AC=1;AN=190;BQB=0.957516;DP=4952;DP4=2442,2212,28,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55858e-26;MQSB=0.997153;RPB=0.818135;SGB=203.927;VDB=0.424627;EFF=UTR_3_PRIME(MODIFIER||259||351|LOC_Os01g27990|protein_coding|CODING|LOC_Os01g27990.2|1|1),INTRON(MODIFIER||||415|LOC_Os01g27990|protein_coding|CODING|LOC_Os01g27990.1|1|1) FN3976-S.SNP.1:15653843 chr01:015653843 0 W/15653843-15653843 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.852927;DP=2789;DP4=1539,1167,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00645393;MQB=1.44868e-05;MQSB=0.370599;RPB=0.789507;SGB=45.0404;VDB=0.620109;EFF=INTRON(MODIFIER||||1483|LOC_Os01g28000|protein_coding|CODING|LOC_Os01g28000.1|3|1) FN3576-S.SNP.1:15655463 chr01:015655463 0 W/15655463-15655463 FN3576-S SNP C -> T AC=2;AN=188;BQB=0.0935236;DP=3442;DP4=1490,1686,13,18;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00145264;MQB=7.43241e-08;MQSB=0.119626;RPB=0.292261;SGB=135.302;VDB=0.0532097;EFF=INTRON(MODIFIER||||1483|LOC_Os01g28000|protein_coding|CODING|LOC_Os01g28000.1|4|1) FN2593-S.SNP.1:15659324 chr01:015659324 0 W/15659324-15659324 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.889909;DP=4376;DP4=2123,1981,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.95836e-10;MQSB=0.998838;RPB=0.966222;SGB=61.7198;VDB=0.792062;EFF=INTRON(MODIFIER||||1483|LOC_Os01g28000|protein_coding|CODING|LOC_Os01g28000.1|10|1) FN2085-S.SNP.1:15660559 chr01:015660559 0 W/15660559-15660559 FN2085-S SNP T -> C AC=1;AN=168;BQB=0.849411;DP=4253;DP4=2287,1913,19,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.86258e-13;MQSB=0.979042;RPB=0.467904;SGB=-9.7719;VDB=0.0247094;EFF=SPLICE_SITE_DONOR(HIGH||||1483|LOC_Os01g28000|protein_coding|CODING|LOC_Os01g28000.1|12|1),INTRON(MODIFIER||||1483|LOC_Os01g28000|protein_coding|CODING|LOC_Os01g28000.1|12|1);LOF=(LOC_Os01g28000|LOC_Os01g28000|1|1.00) FN1543-S.SNP.1:15661407 chr01:015661407 0 W/15661407-15661407 FN1543-S Single Base Substitution G-A INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1290-S.SNP.1:15661874 chr01:015661874 0 W/15661874-15661874 FN1290-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN985-S.SNP.1:15664392 chr01:015664392 0 W/15664392-15664392 FN985-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g28010 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1561-S.SNP.1:15664982 chr01:015664982 0 W/15664982-15664982 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1156-XA21.SNP.1:15665347 chr01:015665347 0 W/15665347-15665347 FN1156-XA21 Single Base Substitution A-T INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3760-S.SNP.1:15665350 chr01:015665350 0 W/15665350-15665350 FN3760-S SNP G -> A AC=1;AN=190;BQB=0.8927;DP=3029;DP4=1391,1507,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30981e-12;MQSB=0.364951;RPB=0.775158;SGB=64.5316;VDB=0.688488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2162-S.SNP.1:15666093 chr01:015666093 0 W/15666093-15666093 FN2162-S SNP G -> T AC=1;AN=168;BQB=0.000374343;DP=3535;DP4=2354,1143,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00311174;MQB=0.221242;MQSB=3.44544e-16;RPB=0.994392;SGB=-113.477;VDB=0.645884;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.1:15670153 chr01:015670153 0 W/15670153-15670153 FN-294 Single Base Substitution G-A INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN1213-S.SNP.1:15672594 chr01:015672594 0 W/15672594-15672594 FN1213-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN3532-S.SNP.1:15676516 chr01:015676516 0 W/15676516-15676516 FN3532-S SNP C -> A AC=2;AN=188;BQB=0.969039;DP=2923;DP4=1204,1620,16,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.00867e-22;MQSB=0.985278;RPB=0.881879;SGB=162.561;VDB=0.925387;EFF=UTR_5_PRIME(MODIFIER||233||269|LOC_Os01g28030|protein_coding|CODING|LOC_Os01g28030.1|1|1) FN2188-S.SNP.1:15681112 chr01:015681112 0 W/15681112-15681112 FN2188-S SNP T -> A AC=1;AN=190;BQB=0.99933;DP=5045;DP4=2400,2274,16,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44021e-17;MQSB=0.984271;RPB=0.0743796;SGB=131.065;VDB=0.581569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.1:15684632 chr01:015684632 0 W/15684632-15684632 FN2467 SNP C -> A AC=1;AN=200;BQB=0.386517;DP=4585;DP4=1916,2369,6,17;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00588877;MQB=0.908141;MQSB=0.87242;RPB=0.649017;SGB=100.316;VDB=0.523101;EFF=INTRON(MODIFIER||||463|LOC_Os01g28040|protein_coding|CODING|LOC_Os01g28040.1|1|1) FN2257-S.SNP.1:15693694 chr01:015693694 0 W/15693694-15693694 FN2257-S SNP G -> A AC=1;AN=190;BQB=0.996485;DP=3715;DP4=1801,1684,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97238e-08;MQSB=0.174827;RPB=0.913406;SGB=71.8647;VDB=0.787424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C179Y|265|LOC_Os01g28050|protein_coding|CODING|LOC_Os01g28050.1|1|1) FN3365-S.SNP.1:15696440 chr01:015696440 0 W/15696440-15696440 FN3365-S SNP G -> T AC=1;AN=184;BQB=0.956948;DP=3291;DP4=1057,2133,4,18;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.209359;MQB=0.123691;MQSB=2.9739e-07;RPB=0.413361;SGB=-91.6541;VDB=0.994727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.1:15697978 chr01:015697978 0 W/15697978-15697978 FN2304 SNP C -> T AC=2;AN=192;BQB=0.486697;DP=2616;DP4=1702,477,30,2;HOB=0.0206163;ICB=0.494846;MQ=37;MQ0F=0.0355505;MQB=0.880344;MQSB=1.75115e-22;RPB=0.999463;SGB=-42.2982;VDB=0.266338;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.1:15699809 chr01:015699809 0 W/15699809-15699809 FN1460-S Single Base Substitution T-C INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3358-S.SNP.1:15703371 chr01:015703371 0 W/15703371-15703371 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.233314;DP=2796;DP4=1183,1430,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0114449;MQB=0.986452;MQSB=7.18962e-14;RPB=0.889614;SGB=39.2697;VDB=0.812925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.1:15704669 chr01:015704669 0 W/15704669-15704669 FN3701-S SNP C -> G AC=1;AN=190;BQB=0.929867;DP=2594;DP4=1174,1303,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0925212;MQB=0.998195;MQSB=1.16003e-19;RPB=0.954488;SGB=43.2083;VDB=0.478096;EFF=INTRON(MODIFIER||||1052|LOC_Os01g28060|protein_coding|CODING|LOC_Os01g28060.1|1|1) FN1117-S.SNP.1:15709159 chr01:015709159 0 W/15709159-15709159 FN1117-S Single Base Substitution C-A INTRON HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1717-S.SNP.1:15731172 chr01:015731172 0 W/15731172-15731172 FN1717-S SNP T -> G AC=1;AN=188;BQB=0.999941;DP=1764;DP4=543,1180,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0521542;MQB=0.0759402;MQSB=0.407333;RPB=0.381427;SGB=35.9843;VDB=0.805818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.1:15733317 chr01:015733317 0 W/15733317-15733317 FN1716-S SNP T -> A AC=2;AN=188;BQB=0.876437;DP=3293;DP4=1622,1626,15,2;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.000303674;MQB=0.72619;MQSB=0;RPB=0.886374;SGB=28.6195;VDB=0.205655;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.1:15735321 chr01:015735321 0 W/15735321-15735321 FN2430 SNP C -> T AC=2;AN=200;BQB=0.326536;DP=4400;DP4=1995,2112,24,21;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00340909;MQB=1.19982e-12;MQSB=7.50807e-13;RPB=0.752088;SGB=52.8295;VDB=0.999277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.1:15748113 chr01:015748113 0 W/15748113-15748113 FN2572-S SNP C -> T AC=2;AN=198;BQB=0.994339;DP=3885;DP4=1428,2182,24,22;HOB=0.019998;ICB=0.495001;MQ=17;MQ0F=0.497812;MQB=0.601956;MQSB=0.256221;RPB=0.715703;SGB=104.603;VDB=0.000346766;EFF=INTRON(MODIFIER||||280|LOC_Os01g28130|protein_coding|CODING|LOC_Os01g28130.1|7|1) FN-148.SNP.1:15764252 chr01:015764252 0 W/15764252-15764252 FN-148 Single Base Substitution G-A INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN3770-S.SNP.1:15772824 chr01:015772824 0 W/15772824-15772824 FN3770-S SNP G -> T AC=1;AN=190;BQB=0.916557;DP=2926;DP4=1766,1059,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00615174;MQB=2.12562e-05;MQSB=0.12468;RPB=0.65079;SGB=49.0954;VDB=0.585871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G846V|1483|LOC_Os01g28140|protein_coding|CODING|LOC_Os01g28140.1|3|1) FN3979-S.SNP.1:15775649 chr01:015775649 0 W/15775649-15775649 FN3979-S SNP C -> G AC=1;AN=168;BQB=0.999911;DP=2923;DP4=1376,1440,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000342114;MQB=2.22611e-10;MQSB=0.607892;RPB=0.418812;SGB=36.7696;VDB=0.301623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.1:15775990 chr01:015775990 0 W/15775990-15775990 FN2418 SNP C -> A AC=1;AN=200;BQB=0.93836;DP=4583;DP4=2340,2026,8,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00174558;MQB=3.87101e-10;MQSB=0.84389;RPB=0.865488;SGB=51.0851;VDB=0.784501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.1:15775991 chr01:015775991 0 W/15775991-15775991 FN2418 SNP G -> A AC=1;AN=200;BQB=0.987094;DP=4590;DP4=2327,1987,7,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00174292;MQB=1.70259e-08;MQSB=0.90891;RPB=0.978539;SGB=54.6902;VDB=0.846999;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.1:15781915 chr01:015781915 0 W/15781915-15781915 FN4139-S SNP G -> C AC=1;AN=170;BQB=0.999258;DP=1746;DP4=286,1412,2,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.2249e-08;MQSB=0.996287;RPB=0.879504;SGB=56.7575;VDB=0.423561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.1:15782497 chr01:015782497 0 W/15782497-15782497 FN2436 SNP C -> G AC=2;AN=200;BQB=0.469322;DP=3239;DP4=2196,836,34,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.31369e-28;MQSB=0.976902;RPB=0.451856;SGB=133.458;VDB=0.310743;EFF=INTRON(MODIFIER||||78|LOC_Os01g28160|protein_coding|CODING|LOC_Os01g28160.1|1|1) FN1031-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN1031-S Single Base Substitution T-G INTRON HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1401-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN1401-S Single Base Substitution T-G INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1492-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN1492-S Single Base Substitution T-G INTRON Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2173-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN2173-S SNP T -> G AC=2;AN=168;BQB=0.690625;DP=3316;DP4=1631,1646,17,11;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.200241;MQB=0.719517;MQSB=6.00275e-12;RPB=0.230858;SGB=-43.4892;VDB=0.0314789;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN2432.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN2432 SNP T -> G AC=1;AN=200;BQB=0.995892;DP=5222;DP4=2334,2677,11,14;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.163156;MQB=0.160389;MQSB=0.966035;RPB=0.223821;SGB=109.527;VDB=0.169248;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN3456-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN3456-S SNP T -> G AC=2;AN=184;BQB=0.879422;DP=3101;DP4=1749,1276,8,10;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.142857;MQB=0.104489;MQSB=6.2318e-09;RPB=0.983521;SGB=53.3568;VDB=0.508567;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN3564-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN3564-S SNP T -> G AC=1;AN=188;BQB=0.975648;DP=3163;DP4=1749,1342,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.157445;MQB=0.371944;MQSB=1.54013e-14;RPB=0.476891;SGB=53.5223;VDB=0.548573;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN3787-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN3787-S SNP T -> G AC=2;AN=190;BQB=0.781271;DP=2926;DP4=1617,1230,17,6;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.128503;MQB=0.161131;MQSB=7.12128e-05;RPB=0.991685;SGB=71.6393;VDB=0.736993;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN4189-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN4189-S SNP T -> G AC=2;AN=170;BQB=0.692828;DP=2364;DP4=1365,957,6,5;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.128173;MQB=0.255896;MQSB=0.439606;RPB=0.993219;SGB=43.4296;VDB=0.939949;EFF=INTRON(MODIFIER||||1102|LOC_Os01g28184|protein_coding|CODING|LOC_Os01g28184.1|1|1) FN432-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN432-S Single Base Substitution T-G INTRON HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN626-S.SNP.1:15793169 chr01:015793169 0 W/15793169-15793169 FN626-S Single Base Substitution T-G INTRON HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN-295.SNP.1:15802352 chr01:015802352 0 W/15802352-15802352 FN-295 Single Base Substitution A-G INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1444-S.SNP.1:15803200 chr01:015803200 0 W/15803200-15803200 FN1444-S Single Base Substitution A-C INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN2795-S.SNP.1:15804025 chr01:015804025 0 W/15804025-15804025 FN2795-S SNP T -> A AC=1;AN=198;BQB=0.811061;DP=4124;DP4=1879,1752,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.53556e-09;MQSB=0.797476;RPB=0.949045;SGB=54.5295;VDB=0.143887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.1:15807549 chr01:015807549 0 W/15807549-15807549 FN1442-S Single Base Substitution G-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2701-S.SNP.1:15808304 chr01:015808304 0 W/15808304-15808304 FN2701-S SNP A -> C AC=1;AN=200;BQB=0.985491;DP=4257;DP4=2061,1960,5,11;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0575523;MQB=0.885039;MQSB=0.158936;RPB=0.510127;SGB=68.0801;VDB=0.000713702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.1:15816031 chr01:015816031 0 W/15816031-15816031 FN2395 SNP G -> A AC=2;AN=200;BQB=0.574823;DP=4796;DP4=2253,2259,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.54083e-18;MQSB=0.986939;RPB=0.109922;SGB=-5.24302;VDB=0.500735;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.1:15821009 chr01:015821009 0 W/15821009-15821009 W423-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN671-S.SNP.1:15821258 chr01:015821258 0 W/15821258-15821258 FN671-S Single Base Substitution G-A INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1466-S.SNP.1:15822758 chr01:015822758 0 W/15822758-15822758 FN1466-S Single Base Substitution T-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN-196.SNP.1:15822984 chr01:015822984 0 W/15822984-15822984 FN-196 Single Base Substitution C-T INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2753-S.SNP.1:15824176 chr01:015824176 0 W/15824176-15824176 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.807482;DP=4913;DP4=2295,2322,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60865e-17;MQSB=0.99975;RPB=0.999998;SGB=94.3471;VDB=0.465379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R961C|1057|LOC_Os01g28244|protein_coding|CODING|LOC_Os01g28244.1|7|1) FN2395.SNP.1:15824843 chr01:015824843 0 W/15824843-15824843 FN2395 SNP A -> C AC=2;AN=200;BQB=0.0272652;DP=4475;DP4=2009,1929,24,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.65557e-28;MQSB=0.888618;RPB=0.820153;SGB=6.25521;VDB=0.938143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S738R|1057|LOC_Os01g28244|protein_coding|CODING|LOC_Os01g28244.1|7|1) FN2093-S.SNP.1:15833314 chr01:015833314 0 W/15833314-15833314 FN2093-S SNP A -> T AC=2;AN=168;BQB=0.94354;DP=4178;DP4=2170,1948,22,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.38143e-25;MQSB=0.941112;RPB=0.598065;SGB=-4.17128;VDB=0.953879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2093-S.SNP.1:15833315 chr01:015833315 0 W/15833315-15833315 FN2093-S SNP A -> T AC=2;AN=168;BQB=0.697064;DP=4176;DP4=2171,1942,25,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.18021e-22;MQSB=0.943518;RPB=0.543886;SGB=-212.147;VDB=0.940689;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.1:15834406 chr01:015834406 0 W/15834406-15834406 FN_N1-169-1 Single Base Substitution C-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-6.SNP.1:15834406 chr01:015834406 0 W/15834406-15834406 N1-169-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. FN1075-S.SNP.1:15838395 chr01:015838395 0 W/15838395-15838395 FN1075-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g28270 retrotransposon protein, putative, Ty1-copia subclass SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3563-S.SNP.1:15838575 chr01:015838575 0 W/15838575-15838575 FN3563-S SNP A -> T AC=2;AN=188;BQB=0.453249;DP=2671;DP4=1290,1290,8,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000374392;MQB=3.72735e-15;MQSB=0.00468687;RPB=0.999699;SGB=66.7689;VDB=0.812841;EFF=INTRON(MODIFIER||||385|LOC_Os01g28270|protein_coding|CODING|LOC_Os01g28270.1|2|1) FN406-S.SNP.1:15850010 chr01:015850010 0 W/15850010-15850010 FN406-S Single Base Substitution A-T INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN406-S.SNP.1:15850011 chr01:015850011 0 W/15850011-15850011 FN406-S Single Base Substitution G-T INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN-84.SNP.1:15857523 chr01:015857523 0 W/15857523-15857523 FN-84 Single Base Substitution G-A INTRON HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN786-S.SNP.1:15862234 chr01:015862234 0 W/15862234-15862234 FN786-S Single Base Substitution G-A INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2680-S.SNP.1:15867294 chr01:015867294 0 W/15867294-15867294 FN2680-S SNP C -> T AC=2;AN=200;BQB=0.639558;DP=5639;DP4=3011,2341,32,24;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.095939;MQB=0.984439;MQSB=0;RPB=0.590699;SGB=191.687;VDB=0.71859;EFF=INTRON(MODIFIER||||1330|LOC_Os01g28330|protein_coding|CODING|LOC_Os01g28330.1|2|1) FN2441.SNP.1:15868687 chr01:015868687 0 W/15868687-15868687 FN2441 SNP T -> A AC=1;AN=200;BQB=0.0491635;DP=4038;DP4=1848,1655,9,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00173353;MQB=2.43392e-07;MQSB=0.00651606;RPB=0.604843;SGB=-113.695;VDB=0.107181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L217M|1330|LOC_Os01g28330|protein_coding|CODING|LOC_Os01g28330.1|3|1) FN-236.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN-236 Single Base Substitution G-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-301.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN-301 Single Base Substitution G-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1227-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN1227-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1277-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN1277-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2297.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN2297 SNP G -> A AC=2;AN=192;BQB=0.254231;DP=4612;DP4=2150,2171,17,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000867303;MQB=6.97062e-18;MQSB=0.98402;RPB=0.445855;SGB=111.067;VDB=0.902486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN3373-S SNP G -> A AC=2;AN=184;BQB=0.94691;DP=3161;DP4=1507,1539,21,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000632711;MQB=3.60606e-20;MQSB=0.831988;RPB=0.801191;SGB=179.874;VDB=0.528803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN3422-S SNP G -> A AC=2;AN=184;BQB=0.179498;DP=3003;DP4=1420,1499,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000666001;MQB=1.34555e-11;MQSB=0.970175;RPB=0.584159;SGB=130.135;VDB=0.691486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3658-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN3658-S SNP G -> A AC=2;AN=190;BQB=0.962718;DP=3067;DP4=1424,1550,5,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000326052;MQB=9.52351e-07;MQSB=0.842588;RPB=0.815997;SGB=44.5415;VDB=0.515549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN3783-S SNP G -> A AC=2;AN=190;BQB=0.971254;DP=2907;DP4=1367,1420,22,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000343997;MQB=2.31147e-19;MQSB=0.950149;RPB=0.927213;SGB=162.942;VDB=0.62514;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.1:15873160 chr01:015873160 0 W/15873160-15873160 FN963-S Single Base Substitution G-A INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN-390.SNP.1:15883054 chr01:015883054 0 W/15883054-15883054 FN-390 Single Base Substitution G-C INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN2611-S.SNP.1:15883728 chr01:015883728 0 W/15883728-15883728 FN2611-S SNP C -> G AC=1;AN=200;BQB=0.996748;DP=4856;DP4=2279,2176,26,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.89251e-29;MQSB=0.817994;RPB=0.851688;SGB=177.266;VDB=0.894642;EFF=INTRON(MODIFIER||||438|LOC_Os01g28360|protein_coding|CODING|LOC_Os01g28360.1|5|1) FN1464-S.SNP.1:15891922 chr01:015891922 0 W/15891922-15891922 FN1464-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g28370 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2089-S.SNP.1:15893469 chr01:015893469 0 W/15893469-15893469 FN2089-S SNP T -> C AC=1;AN=168;BQB=0.999733;DP=1161;DP4=272,803,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.07951e-05;MQSB=0.993776;RPB=0.866696;SGB=47.7421;VDB=0.229729;EFF=INTRON(MODIFIER||||1801|LOC_Os01g28370|protein_coding|CODING|LOC_Os01g28370.1|7|1) FN1678-S.SNP.1:15894342 chr01:015894342 0 W/15894342-15894342 FN1678-S SNP A -> T AC=2;AN=188;BQB=0.0657219;DP=3576;DP4=1825,1715,14,18;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0170582;MQB=0.00521985;MQSB=6.9704e-11;RPB=0.945791;SGB=-79.383;VDB=0.804562;EFF=INTRON(MODIFIER||||1801|LOC_Os01g28370|protein_coding|CODING|LOC_Os01g28370.1|7|1) FN1074-S.SNP.1:15895551 chr01:015895551 0 W/15895551-15895551 FN1074-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN2795-S.SNP.1:15896428 chr01:015896428 0 W/15896428-15896428 FN2795-S SNP G -> C AC=1;AN=198;BQB=0.524276;DP=4109;DP4=1845,2017,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00657094;MQB=1.67005e-06;MQSB=0.0232085;RPB=0.136478;SGB=17.325;VDB=0.229192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L438V|1801|LOC_Os01g28370|protein_coding|CODING|LOC_Os01g28370.1|5|1),SPLICE_SITE_REGION(LOW||||1801|LOC_Os01g28370|protein_coding|CODING|LOC_Os01g28370.1|5|1) FN3597-S.SNP.1:15900137 chr01:015900137 0 W/15900137-15900137 FN3597-S SNP G -> A AC=1;AN=188;BQB=0.996255;DP=3053;DP4=1819,1090,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00393056;MQB=4.27878e-05;MQSB=0.0101081;RPB=0.966828;SGB=60.7873;VDB=0.222952;EFF=INTRON(MODIFIER||||1801|LOC_Os01g28370|protein_coding|CODING|LOC_Os01g28370.1|1|1) FN-20.SNP.1:15900968 chr01:015900968 0 W/15900968-15900968 FN-20 Single Base Substitution G-C INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN2183-S.SNP.1:15910192 chr01:015910192 0 W/15910192-15910192 FN2183-S SNP T -> C AC=1;AN=190;BQB=0.999531;DP=4997;DP4=2074,2594,20,23;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0914549;MQB=0.409924;MQSB=1.4013e-44;RPB=0.993136;SGB=95.1683;VDB=0.541113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K991E|1868|LOC_Os01g28390|protein_coding|CODING|LOC_Os01g28390.1|2|1) FN3866-S.SNP.1:15914289 chr01:015914289 0 W/15914289-15914289 FN3866-S SNP A -> G AC=1;AN=158;BQB=0.785199;DP=1868;DP4=1168,633,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000151729;MQSB=4.87175e-06;RPB=0.952647;SGB=47.0672;VDB=0.399491;EFF=INTRON(MODIFIER||||1868|LOC_Os01g28390|protein_coding|CODING|LOC_Os01g28390.1|1|1) FN-377.SNP.1:15917076 chr01:015917076 0 W/15917076-15917076 FN-377 Single Base Substitution A-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-377.SNP.1:15917077 chr01:015917077 0 W/15917077-15917077 FN-377 Single Base Substitution C-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-123.SNP.1:15922397 chr01:015922397 0 W/15922397-15922397 FN-123 Single Base Substitution G-C INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1011-S.SNP.1:15923518 chr01:015923518 0 W/15923518-15923518 FN1011-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g28420 transposon protein, putative, CACTA, En/Spm sub-class SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3666-S.SNP.1:15925268 chr01:015925268 0 W/15925268-15925268 FN3666-S SNP A -> G AC=1;AN=190;BQB=0.995684;DP=2656;DP4=1440,1093,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0146837;MQB=0.0563502;MQSB=8.89382e-23;RPB=0.976496;SGB=64.5316;VDB=0.29098;EFF=SPLICE_SITE_DONOR(HIGH||||672|LOC_Os01g28420|protein_coding|CODING|LOC_Os01g28420.1|4|1),INTRON(MODIFIER||||672|LOC_Os01g28420|protein_coding|CODING|LOC_Os01g28420.1|4|1);LOF=(LOC_Os01g28420|LOC_Os01g28420|1|1.00) FN3731-S.SNP.1:15925481 chr01:015925481 0 W/15925481-15925481 FN3731-S SNP G -> T AC=1;AN=190;BQB=0.997191;DP=2313;DP4=1086,1129,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.49175e-07;MQSB=0.736687;RPB=0.346608;SGB=44.5415;VDB=0.010438;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A193D|672|LOC_Os01g28420|protein_coding|CODING|LOC_Os01g28420.1|3|1) FN3731-S.SNP.1:15925482 chr01:015925482 0 W/15925482-15925482 FN3731-S SNP C -> T AC=1;AN=190;BQB=0.906182;DP=2316;DP4=1108,1122,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80691e-08;MQSB=0.914953;RPB=0.236033;SGB=18.552;VDB=0.04137;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A193T|672|LOC_Os01g28420|protein_coding|CODING|LOC_Os01g28420.1|3|1) FN2112-S.SNP.1:15931499 chr01:015931499 0 W/15931499-15931499 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.0524914;DP=2974;DP4=1520,1399,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000336247;MQB=1.10675e-07;MQSB=0.0865175;RPB=0.993278;SGB=-126.487;VDB=0.806035;EFF=INTRON(MODIFIER||||863|LOC_Os01g28440|protein_coding|CODING|LOC_Os01g28440.1|2|1) FN2680-S.SNP.1:15935279 chr01:015935279 0 W/15935279-15935279 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.999692;DP=4915;DP4=2353,2208,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.74854e-13;MQSB=0.801001;RPB=0.816273;SGB=22.3313;VDB=0.44394;EFF=UTR_3_PRIME(MODIFIER||209||164|LOC_Os01g28450|protein_coding|CODING|LOC_Os01g28450.1|1|1) FN768-S.SNP.1:15936923 chr01:015936923 0 W/15936923-15936923 FN768-S Single Base Substitution C-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN1494-S.SNP.1:15939713 chr01:015939713 0 W/15939713-15939713 FN1494-S Single Base Substitution T-C INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1184-S.SNP.1:15942628 chr01:015942628 0 W/15942628-15942628 FN1184-S Single Base Substitution A-T INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1192-S.SNP.1:15944123 chr01:015944123 0 W/15944123-15944123 FN1192-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN-51.SNP.1:15945349 chr01:015945349 0 W/15945349-15945349 FN-51 Single Base Substitution T-A INTERGENIC HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2486.SNP.1:15946422 chr01:015946422 0 W/15946422-15946422 FN2486 SNP G -> C AC=1;AN=200;BQB=0.967615;DP=3623;DP4=1849,1603,13,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000276014;MQB=1.2481e-09;MQSB=0.297138;RPB=0.988786;SGB=39.9056;VDB=0.217279;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.1:15948409 chr01:015948409 0 W/15948409-15948409 FN2088-S SNP A -> G AC=2;AN=168;BQB=0.000307566;DP=3999;DP4=1699,2228,20,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.1749e-19;MQSB=0.994341;RPB=0.945892;SGB=-1.58638;VDB=0.234762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.1:15956078 chr01:015956078 0 W/15956078-15956078 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.59367;DP=3656;DP4=1940,1659,18,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03287e-15;MQSB=0.986956;RPB=0.509975;SGB=-123.754;VDB=0.0222577;EFF=INTRON(MODIFIER||||259|LOC_Os01g28490|protein_coding|CODING|LOC_Os01g28490.1|1|1) FN4231-S.SNP.1:15958669 chr01:015958669 0 W/15958669-15958669 FN4231-S SNP A -> C AC=2;AN=170;BQB=0.713399;DP=2316;DP4=1132,1100,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.00222e-09;MQSB=0.968786;RPB=0.9828;SGB=78.9707;VDB=0.377368;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.1:15963419 chr01:015963419 0 W/15963419-15963419 FN-408 Single Base Substitution C-A INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN3375-S.SNP.1:15964517 chr01:015964517 0 W/15964517-15964517 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.826903;DP=3367;DP4=1794,1451,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.16091e-07;MQSB=0.970549;RPB=0.0156115;SGB=2.23696;VDB=0.189211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.1:15964990 chr01:015964990 0 W/15964990-15964990 FN2706-S SNP A -> G AC=1;AN=200;BQB=0.00210808;DP=5368;DP4=2636,2476,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.85499e-09;MQSB=0.914021;RPB=0.961631;SGB=-13.7154;VDB=0.693781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.1:15968097 chr01:015968097 0 W/15968097-15968097 FN2658-S SNP T -> A AC=2;AN=200;BQB=0.989822;DP=4864;DP4=2264,2290,32,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.91246e-27;MQSB=0.791814;RPB=0.900264;SGB=5.65004;VDB=0.105316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.1:15972308 chr01:015972308 0 W/15972308-15972308 FN3543-S SNP C -> T AC=1;AN=188;BQB=0.986625;DP=2798;DP4=1470,1272,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000357398;MQB=0.000100322;MQSB=0.148323;RPB=0.998448;SGB=30.8063;VDB=0.853153;EFF=INTRON(MODIFIER||||111|LOC_Os01g28530|protein_coding|CODING|LOC_Os01g28530.1|2|1) FN1273-S.SNP.1:15972390 chr01:015972390 0 W/15972390-15972390 FN1273-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g28530 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1409-S.SNP.1:15977607 chr01:015977607 0 W/15977607-15977607 FN1409-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN3934-S.SNP.1:15988766 chr01:015988766 0 W/15988766-15988766 FN3934-S SNP G -> T AC=2;AN=158;BQB=0.996085;DP=2338;DP4=1077,1163,12,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.03888e-14;MQSB=0.928443;RPB=0.140537;SGB=121.348;VDB=0.13942;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.1:16002912 chr01:016002912 0 W/16002912-16002912 FN-158 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g28600 exo70 exocyst complex subunit family protein, putative, expressed SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN_935-1.SNP.1:16010802 chr01:016010802 0 W/16010802-16010802 FN_935-1 Single Base Substitution G-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. 703-5.SNP.1:16028207 chr01:016028207 0 W/16028207-16028207 703-5 Single Base Substitution G-A INTERGENIC Homo SNo: 1454, Mutant_ID: 703-5, Generation: M2, Mutations: 14, Genes: 15, Seed availability: No. FN-90.SNP.1:16030508 chr01:016030508 0 W/16030508-16030508 FN-90 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g28650 retrotransposon, putative, centromere-specific, expressed SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN3362-S.SNP.1:16035356 chr01:016035356 0 W/16035356-16035356 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.990645;DP=4384;DP4=1820,2458,10,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.18177e-17;MQSB=0.791339;RPB=0.941659;SGB=92.0965;VDB=0.71214;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D128N|397|LOC_Os01g28660|protein_coding|CODING|LOC_Os01g28660.1|4|1) FN3552-S.SNP.1:16036073 chr01:016036073 0 W/16036073-16036073 FN3552-S SNP A -> T AC=2;AN=188;BQB=0.0856816;DP=3072;DP4=1306,1580,15,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.20611e-08;MQSB=0.261185;RPB=0.178719;SGB=85.5904;VDB=0.691525;EFF=INTRON(MODIFIER||||397|LOC_Os01g28660|protein_coding|CODING|LOC_Os01g28660.1|5|1) FN4116-S.SNP.1:16043739 chr01:016043739 0 W/16043739-16043739 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.989233;DP=2608;DP4=1535,946,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.000766871;MQB=4.47614e-06;MQSB=2.80788e-05;RPB=0.908874;SGB=57.644;VDB=0.474446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.1:16045861 chr01:016045861 0 W/16045861-16045861 FN1455-S Single Base Substitution C-G INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1556-S.SNP.1:16054754 chr01:016054754 0 W/16054754-16054754 FN1556-S Single Base Substitution G-A UTR_3_PRIME Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN-158.SNP.1:16059602 chr01:016059602 0 W/16059602-16059602 FN-158 Single Base Substitution C-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN785-S.SNP.1:16069972 chr01:016069972 0 W/16069972-16069972 FN785-S Single Base Substitution C-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN-207.SNP.1:16069983 chr01:016069983 0 W/16069983-16069983 FN-207 Single Base Substitution T-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN_935-1.SNP.1:16072113 chr01:016072113 0 W/16072113-16072113 FN_935-1 Single Base Substitution A-G Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3693-S.SNP.1:16073490 chr01:016073490 0 W/16073490-16073490 FN3693-S SNP C -> T AC=1;AN=190;BQB=0.973021;DP=3129;DP4=1465,1554,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.02477e-05;MQSB=0.999352;RPB=0.2054;SGB=35.4339;VDB=0.431879;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.1:16077153 chr01:016077153 0 W/16077153-16077153 FN926-S Single Base Substitution T-G INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1665-S.SNP.1:16089838 chr01:016089838 0 W/16089838-16089838 FN1665-S Single Base Substitution T-A INTRON HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1665-S.SNP.1:16089840 chr01:016089840 0 W/16089840-16089840 FN1665-S Single Base Substitution C-A INTRON HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN4087-S.SNP.1:16090866 chr01:016090866 0 W/16090866-16090866 FN4087-S SNP C -> A AC=2;AN=182;BQB=0.923856;DP=2983;DP4=1335,1584,8,9;HOB=0.0217365;ICB=0.494567;MQ=32;MQ0F=0.0958766;MQB=0.987489;MQSB=6.55119e-18;RPB=0.600614;SGB=71.1765;VDB=0.123299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G1099V|1322|LOC_Os01g28740|protein_coding|CODING|LOC_Os01g28740.1|5|1) FN1012-S.SNP.1:16095845 chr01:016095845 0 W/16095845-16095845 FN1012-S Single Base Substitution A-G INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3698-S.SNP.1:16098903 chr01:016098903 0 W/16098903-16098903 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.970487;DP=2750;DP4=1363,1283,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68284e-07;MQSB=0.986266;RPB=0.752678;SGB=13.4442;VDB=0.824582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.1:16108178 chr01:016108178 0 W/16108178-16108178 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.999827;DP=3826;DP4=1795,1773,17,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.89172e-21;MQSB=0.996751;RPB=0.299328;SGB=68.2711;VDB=0.0236086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.1:16108179 chr01:016108179 0 W/16108179-16108179 FN2556-S SNP T -> A AC=1;AN=198;BQB=0.474219;DP=3834;DP4=1768,1741,18,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.4597e-21;MQSB=0.995557;RPB=0.371794;SGB=31.6811;VDB=0.0117443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.1:16108180 chr01:016108180 0 W/16108180-16108180 FN2556-S SNP T -> A AC=1;AN=198;BQB=0.707258;DP=3840;DP4=1816,1742,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.91321e-20;MQSB=0.995822;RPB=0.30031;SGB=136.856;VDB=0.0145893;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.1:16112739 chr01:016112739 0 W/16112739-16112739 FN548-S Single Base Substitution A-G INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN1613-S.SNP.1:16113764 chr01:016113764 0 W/16113764-16113764 FN1613-S Single Base Substitution G-A INTRON HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN585-S.SNP.1:16114367 chr01:016114367 0 W/16114367-16114367 FN585-S Single Base Substitution A-G INTRON HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1372-S.SNP.1:16116056 chr01:016116056 0 W/16116056-16116056 FN1372-S Single Base Substitution T-C INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1697-S.SNP.1:16117194 chr01:016117194 0 W/16117194-16117194 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.106054;DP=4024;DP4=1909,2059,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.18924e-09;MQSB=0.9264;RPB=0.963271;SGB=-10.6534;VDB=0.195328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.1:16128228 chr01:016128228 0 W/16128228-16128228 FN1358-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN-114.SNP.1:16133800 chr01:016133800 0 W/16133800-16133800 FN-114 Single Base Substitution T-C INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN-114.SNP.1:16133802 chr01:016133802 0 W/16133802-16133802 FN-114 Single Base Substitution C-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN947-S.SNP.1:16137366 chr01:016137366 0 W/16137366-16137366 FN947-S Single Base Substitution A-T INTRON HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3867-S.SNP.1:16138099 chr01:016138099 0 W/16138099-16138099 FN3867-S SNP A -> G AC=1;AN=158;BQB=0.547195;DP=2261;DP4=1112,1089,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000247078;MQSB=0.787699;RPB=0.937961;SGB=29.5899;VDB=0.933643;EFF=INTRON(MODIFIER||||117|LOC_Os01g28810|protein_coding|CODING|LOC_Os01g28810.1|2|1) FN1349-S.SNP.1:16138711 chr01:016138711 0 W/16138711-16138711 FN1349-S Single Base Substitution T-A INTRON HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN490-S.SNP.1:16141487 chr01:016141487 0 W/16141487-16141487 FN490-S Single Base Substitution G-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN490-S.SNP.1:16141488 chr01:016141488 0 W/16141488-16141488 FN490-S Single Base Substitution A-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN1033-S.SNP.1:16143370 chr01:016143370 0 W/16143370-16143370 FN1033-S Single Base Substitution C-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN_769-4-1.SNP.1:16146358 chr01:016146358 0 W/16146358-16146358 FN_769-4-1 Single Base Substitution C-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN-133.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN-133 Single Base Substitution A-G INTERGENIC HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-207.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN-207 Single Base Substitution A-G INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1573-S.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN1573-S Single Base Substitution A-G INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2172-S.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN2172-S SNP A -> G AC=1;AN=168;BQB=0.0291226;DP=4033;DP4=1966,1992,19,15;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.000100599;MQSB=0.00052284;RPB=0.847099;SGB=-162.179;VDB=0.361674;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN230-S Single Base Substitution A-G INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN4114-S.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN4114-S SNP A -> G AC=2;AN=182;BQB=0.996302;DP=3037;DP4=1666,1287,13,8;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=1.36189e-06;MQSB=0.191336;RPB=0.936915;SGB=63.7146;VDB=0.95852;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.1:16156299 chr01:016156299 0 W/16156299-16156299 FN713-S Single Base Substitution A-G INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN833-S.SNP.1:16159343 chr01:016159343 0 W/16159343-16159343 FN833-S Single Base Substitution C-T INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3728-S.SNP.1:16160467 chr01:016160467 0 W/16160467-16160467 FN3728-S SNP T -> G AC=2;AN=190;BQB=0.818117;DP=1192;DP4=386,560,10,3;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.00503356;MQB=0.794115;MQSB=0.955177;RPB=0.331234;SGB=1.00337;VDB=0.795392;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.1:16160801 chr01:016160801 0 W/16160801-16160801 FN3462-S SNP C -> T AC=2;AN=184;BQB=0.547291;DP=3265;DP4=1768,1398,19,10;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0254211;MQB=0.0125771;MQSB=0.0215864;RPB=0.978706;SGB=125.613;VDB=0.81751;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.1:16165140 chr01:016165140 0 W/16165140-16165140 FN920-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g28870 retrotransposon protein, putative, unclassified, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN920-S.SNP.1:16165142 chr01:016165142 0 W/16165142-16165142 FN920-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g28870 retrotransposon protein, putative, unclassified, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN_809-6-1.SNP.1:16168836 chr01:016168836 0 W/16168836-16168836 FN_809-6-1 Single Base Substitution G-A Homo LOC_Os01g28870 retrotransposon protein, putative, unclassified, expressed SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN_812-4-1.SNP.1:16173290 chr01:016173290 0 W/16173290-16173290 FN_812-4-1 Single Base Substitution A-G HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2207-S.SNP.1:16177106 chr01:016177106 0 W/16177106-16177106 FN2207-S SNP A -> G AC=1;AN=190;BQB=0.982043;DP=5007;DP4=2219,2601,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.63628e-11;MQSB=0.990876;RPB=0.719396;SGB=76.4186;VDB=0.463639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.1:16177353 chr01:016177353 0 W/16177353-16177353 FN2374 SNP A -> G AC=2;AN=192;BQB=0.590562;DP=4153;DP4=1788,1984,14,10;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00048158;MQB=4.79625e-09;MQSB=3.99257e-20;RPB=0.969166;SGB=75.4235;VDB=0.178862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.1:16181107 chr01:016181107 0 W/16181107-16181107 FN1679-S SNP A -> G AC=1;AN=188;BQB=0.415921;DP=3066;DP4=1318,1725,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.455643;MQB=0.0290595;MQSB=0;RPB=0.895491;SGB=57.244;VDB=0.69101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.1:16182323 chr01:016182323 0 W/16182323-16182323 FN3918-S SNP G -> A AC=1;AN=158;BQB=0.659629;DP=2491;DP4=1307,1096,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0256925;MQB=0.969871;MQSB=8.38752e-05;RPB=0.788738;SGB=30.704;VDB=0.975885;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.1:16189725 chr01:016189725 0 W/16189725-16189725 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1205-S.SNP.1:16192568 chr01:016192568 0 W/16192568-16192568 FN1205-S Single Base Substitution A-G INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1084-S.SNP.1:16198303 chr01:016198303 0 W/16198303-16198303 FN1084-S Single Base Substitution G-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1295-S.SNP.1:16200712 chr01:016200712 0 W/16200712-16200712 FN1295-S Single Base Substitution G-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2184-S.SNP.1:16201123 chr01:016201123 0 W/16201123-16201123 FN2184-S SNP T -> A AC=2;AN=190;BQB=0.937543;DP=5346;DP4=2453,2550,22,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.00038e-26;MQSB=0.981945;RPB=0.690383;SGB=208.481;VDB=0.397743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.1:16202539 chr01:016202539 0 W/16202539-16202539 FN2309 SNP C -> T AC=1;AN=192;BQB=0.948647;DP=4122;DP4=2268,1571,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.12051e-10;MQSB=0.0433874;RPB=0.999905;SGB=54.0374;VDB=0.846152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.1:16214153 chr01:016214153 0 W/16214153-16214153 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.993075;DP=3430;DP4=1361,1949,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.142857;MQB=0.973484;MQSB=0;RPB=0.922188;SGB=80.3949;VDB=0.481745;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.1:16219845 chr01:016219845 0 W/16219845-16219845 FN447-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN456-S.SNP.1:16224498 chr01:016224498 0 W/16224498-16224498 FN456-S Single Base Substitution C-T INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN3306-S.SNP.1:16224538 chr01:016224538 0 W/16224538-16224538 FN3306-S SNP C -> T AC=1;AN=184;BQB=0.99028;DP=2728;DP4=1441,1214,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1922e-07;MQSB=0.469567;RPB=0.783845;SGB=48.7425;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.1:16235876 chr01:016235876 0 W/16235876-16235876 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.6465;DP=2939;DP4=1370,1453,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000340252;MQB=7.93025e-06;MQSB=0.876279;RPB=0.749197;SGB=57.4238;VDB=0.514415;EFF=INTRON(MODIFIER||||1131|LOC_Os01g29000|protein_coding|CODING|LOC_Os01g29000.1|1|1) FN244-S.SNP.1:16236597 chr01:016236597 0 W/16236597-16236597 FN244-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g29000 retrotransposon, putative, centromere-specific, expressed SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2795-S.SNP.1:16241205 chr01:016241205 0 W/16241205-16241205 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.983548;DP=4246;DP4=1882,2173,12,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.27977e-14;MQSB=0.848209;RPB=0.486797;SGB=50.1053;VDB=0.225088;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G1101|1131|LOC_Os01g29000|protein_coding|CODING|LOC_Os01g29000.1|8|1) FN2146-S.SNP.1:16248976 chr01:016248976 0 W/16248976-16248976 FN2146-S SNP C -> T AC=1;AN=168;BQB=0.862691;DP=3117;DP4=1604,1481,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.0836e-10;MQSB=0.994179;RPB=0.188402;SGB=48.4712;VDB=0.331282;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S195N|387|LOC_Os01g29020|protein_coding|CODING|LOC_Os01g29020.1|3|1) FN1072-S.SNP.1:16258702 chr01:016258702 0 W/16258702-16258702 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN-222.SNP.1:16261932 chr01:016261932 0 W/16261932-16261932 FN-222 Single Base Substitution A-G INTRON HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1182-S.SNP.1:16265525 chr01:016265525 0 W/16265525-16265525 FN1182-S Single Base Substitution G-A INTRON HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3906-S.SNP.1:16271921 chr01:016271921 0 W/16271921-16271921 FN3906-S SNP T -> G AC=1;AN=158;BQB=0.999275;DP=2282;DP4=1093,1040,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0118317;MQB=0.0239451;MQSB=0.00238846;RPB=0.771535;SGB=27.3346;VDB=0.692875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.1:16278236 chr01:016278236 0 W/16278236-16278236 FN-390 Single Base Substitution C-G INTERGENIC HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1217-S.SNP.1:16279541 chr01:016279541 0 W/16279541-16279541 FN1217-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN_543-2-6.SNP.1:16281383 chr01:016281383 0 W/16281383-16281383 FN_543-2-6 Single Base Substitution T-C Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN_543-2-6.SNP.1:16281384 chr01:016281384 0 W/16281384-16281384 FN_543-2-6 Single Base Substitution T-C Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN4235-S.SNP.1:16282530 chr01:016282530 0 W/16282530-16282530 FN4235-S SNP C -> A AC=2;AN=170;BQB=0.99167;DP=2352;DP4=1334,895,16,8;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00255102;MQB=2.86309e-08;MQSB=0.989454;RPB=0.994854;SGB=101.184;VDB=0.668429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.1:16286835 chr01:016286835 0 W/16286835-16286835 FN3731-S SNP G -> A AC=1;AN=190;BQB=0.595014;DP=2444;DP4=1072,1281,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.613e-05;MQSB=0.991979;RPB=0.961972;SGB=53.6492;VDB=0.786315;EFF=INTRON(MODIFIER||||481|LOC_Os01g29100|protein_coding|CODING|LOC_Os01g29100.1|3|1) FN4036-S.SNP.1:16286956 chr01:016286956 0 W/16286956-16286956 FN4036-S SNP C -> T AC=2;AN=168;BQB=0.894255;DP=2547;DP4=1220,1214,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.79278e-13;MQSB=0.966942;RPB=0.659196;SGB=69.0561;VDB=0.638466;EFF=INTRON(MODIFIER||||481|LOC_Os01g29100|protein_coding|CODING|LOC_Os01g29100.1|3|1) FN3826-S.SNP.1:16288992 chr01:016288992 0 W/16288992-16288992 FN3826-S SNP T -> C AC=2;AN=190;BQB=0.998788;DP=3364;DP4=1770,1411,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.74614e-22;MQSB=0.763677;RPB=0.913403;SGB=92.6144;VDB=0.897927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.1:16290143 chr01:016290143 0 W/16290143-16290143 FN1633-S Single Base Substitution A-G INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2650-S.SNP.1:16291286 chr01:016291286 0 W/16291286-16291286 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.944208;DP=5233;DP4=2383,2593,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14292e-10;MQSB=0.991958;RPB=0.680448;SGB=72.6852;VDB=0.383641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.1:16300647 chr01:016300647 0 W/16300647-16300647 FN1024-S Single Base Substitution T-C INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3941-S.SNP.1:16301372 chr01:016301372 0 W/16301372-16301372 FN3941-S SNP G -> T AC=1;AN=168;BQB=0.97219;DP=2597;DP4=1270,1228,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.67915e-12;MQSB=0.728227;RPB=0.87111;SGB=92.0501;VDB=0.506378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.1:16304316 chr01:016304316 0 W/16304316-16304316 FN2281 SNP C -> T AC=1;AN=192;BQB=0.374296;DP=5217;DP4=2515,2277,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.58598e-15;MQSB=0.99507;RPB=0.670228;SGB=22.9983;VDB=0.819541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.1:16304884 chr01:016304884 0 W/16304884-16304884 FN2467 SNP C -> T AC=1;AN=200;BQB=0.716796;DP=4072;DP4=1838,2045,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.02286e-08;MQSB=0.999702;RPB=0.963003;SGB=49.6594;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.1:16305129 chr01:016305129 0 W/16305129-16305129 FN-339 Single Base Substitution C-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN_829-2-5.SNP.1:16315743 chr01:016315743 0 W/16315743-16315743 FN_829-2-5 Single Base Substitution T-G Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2791-S.SNP.1:16324777 chr01:016324777 0 W/16324777-16324777 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.0593788;DP=3952;DP4=1897,1789,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.25432e-09;MQSB=0.774823;RPB=0.83234;SGB=-13.2407;VDB=0.563978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.1:16331537 chr01:016331537 0 W/16331537-16331537 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.759367;DP=4571;DP4=2164,2155,19,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.68784e-15;MQSB=0.99996;RPB=0.608441;SGB=55.5366;VDB=0.25911;EFF=INTERGENIC(MODIFIER||||||||||1) FN1275-S.SNP.1:16339035 chr01:016339035 0 W/16339035-16339035 FN1275-S Single Base Substitution G-T INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2621-S.SNP.1:16342644 chr01:016342644 0 W/16342644-16342644 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.403457;DP=4805;DP4=2400,2096,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0012487;MQB=1.30228e-17;MQSB=0.285832;RPB=0.982683;SGB=65.9573;VDB=0.258724;EFF=INTRON(MODIFIER||||199|LOC_Os01g29170|protein_coding|CODING|LOC_Os01g29170.1|1|1) FN3994-S.SNP.1:16356103 chr01:016356103 0 W/16356103-16356103 FN3994-S SNP T -> C AC=1;AN=168;BQB=0.707434;DP=2870;DP4=1551,1192,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.14197e-05;MQSB=0.765544;RPB=0.951818;SGB=38.8805;VDB=0.984758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.1:16358198 chr01:016358198 0 W/16358198-16358198 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.0872579;DP=3287;DP4=1696,1564,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.50355e-07;MQSB=0.997956;RPB=0.217929;SGB=-36.0898;VDB=0.0375875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.1:16375064 chr01:016375064 0 W/16375064-16375064 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.74108;DP=3025;DP4=1507,1402,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10187e-05;MQSB=0.987899;RPB=0.644446;SGB=15.9981;VDB=0.00414998;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:16375189 chr01:016375189 0 W/16375189-16375189 FN951-S Single Base Substitution A-C INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN-299.SNP.1:16379617 chr01:016379617 0 W/16379617-16379617 FN-299 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-410.SNP.1:16382231 chr01:016382231 0 W/16382231-16382231 FN-410 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g29230 expressed protein SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2241-S.SNP.1:16382231 chr01:016382231 0 W/16382231-16382231 FN2241-S SNP A -> T AC=2;AN=190;BQB=0.998324;DP=4749;DP4=2114,2281,12,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30255e-24;MQSB=0.916279;RPB=0.939151;SGB=50.7274;VDB=0.760705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L1059F|1782|LOC_Os01g29230|protein_coding|CODING|LOC_Os01g29230.1|5|1) FN410-S.SNP.1:16382231 chr01:016382231 0 W/16382231-16382231 FN410-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g29230 expressed protein SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN-168.SNP.1:16385920 chr01:016385920 0 W/16385920-16385920 FN-168 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g29230 expressed protein SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN4314-S.SNP.1:16391767 chr01:016391767 0 W/16391767-16391767 FN4314-S SNP T -> C AC=2;AN=170;BQB=0.997081;DP=2704;DP4=1373,1215,22,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.36494e-21;MQSB=0.892469;RPB=0.986437;SGB=117.502;VDB=0.390019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.1:16398935 chr01:016398935 0 W/16398935-16398935 FN1106-S Single Base Substitution G-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3667-S.SNP.1:16412683 chr01:016412683 0 W/16412683-16412683 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.88072;DP=3138;DP4=1484,1518,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81747e-06;MQSB=0.991416;RPB=0.928083;SGB=53.6492;VDB=0.913403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R229K|1496|LOC_Os01g29270|protein_coding|CODING|LOC_Os01g29270.1|1|1) FN1358-S.SNP.1:16415826 chr01:016415826 0 W/16415826-16415826 FN1358-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g29280 expressed protein SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1546-S.SNP.1:16421596 chr01:016421596 0 W/16421596-16421596 FN1546-S Single Base Substitution C-T INTERGENIC Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN4167-S.SNP.1:16422117 chr01:016422117 0 W/16422117-16422117 FN4167-S SNP A -> C AC=2;AN=170;BQB=0.99822;DP=2492;DP4=1182,1234,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.08598e-14;MQSB=0.999854;RPB=0.990699;SGB=44.3104;VDB=0.693673;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.1:16423697 chr01:016423697 0 W/16423697-16423697 FN343-S Single Base Substitution C-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN1297-S.SNP.1:16428825 chr01:016428825 0 W/16428825-16428825 FN1297-S Single Base Substitution C-T INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1243-S.SNP.1:16430260 chr01:016430260 0 W/16430260-16430260 FN1243-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3110-S.SNP.1:16431333 chr01:016431333 0 W/16431333-16431333 FN3110-S SNP T -> G AC=1;AN=184;BQB=0.956532;DP=3243;DP4=1694,1457,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54227e-10;MQSB=0.984714;RPB=0.56301;SGB=30.8405;VDB=0.928875;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.1:16440514 chr01:016440514 0 W/16440514-16440514 FN482-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN4070-S.SNP.1:16442328 chr01:016442328 0 W/16442328-16442328 FN4070-S SNP C -> T AC=2;AN=182;BQB=0.99361;DP=3110;DP4=1617,1393,27,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.55283e-24;MQSB=0.900453;RPB=0.425635;SGB=147.975;VDB=0.0380069;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.1:16442553 chr01:016442553 0 W/16442553-16442553 FN3110-S SNP T -> A AC=1;AN=184;BQB=0.990562;DP=3069;DP4=1318,1644,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27964e-11;MQSB=0.962932;RPB=0.819093;SGB=28.3187;VDB=0.29574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.1:16442554 chr01:016442554 0 W/16442554-16442554 FN3110-S SNP C -> A AC=1;AN=184;BQB=0.993191;DP=3066;DP4=1339,1656,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.6609e-12;MQSB=0.956259;RPB=0.797594;SGB=9.8459;VDB=0.293328;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.1:16444546 chr01:016444546 0 W/16444546-16444546 FN483-S Single Base Substitution C-T INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2329.SNP.1:16449865 chr01:016449865 0 W/16449865-16449865 FN2329 SNP T -> C AC=1;AN=192;BQB=0.568003;DP=4880;DP4=2435,2060,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.3088e-12;MQSB=0.507893;RPB=0.995935;SGB=90.2896;VDB=0.852862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.1:16449868 chr01:016449868 0 W/16449868-16449868 FN2329 SNP T -> A AC=1;AN=192;BQB=0.866151;DP=4854;DP4=2402,2029,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.20041e-13;MQSB=0.562755;RPB=0.903175;SGB=99.4183;VDB=0.792841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.1:16452082 chr01:016452082 0 W/16452082-16452082 FN2215-S SNP A -> T AC=1;AN=190;BQB=0.999342;DP=4881;DP4=2404,2193,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06109e-08;MQSB=0.955557;RPB=0.404142;SGB=5.66499;VDB=0.375586;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.1:16454432 chr01:016454432 0 W/16454432-16454432 FN909-S Single Base Substitution G-A INTERGENIC HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN4304-S.SNP.1:16456891 chr01:016456891 0 W/16456891-16456891 FN4304-S SNP A -> G AC=1;AN=170;BQB=0.747202;DP=2599;DP4=1152,1296,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.14927e-07;MQSB=0.95696;RPB=0.911307;SGB=24.7692;VDB=0.723549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.1:16457638 chr01:016457638 0 W/16457638-16457638 FN-141 Single Base Substitution G-T INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN417-S.SNP.1:16459240 chr01:016459240 0 W/16459240-16459240 FN417-S Single Base Substitution A-G INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2379.SNP.1:16460219 chr01:016460219 0 W/16460219-16460219 FN2379 SNP C -> A AC=1;AN=192;BQB=0.510774;DP=4378;DP4=1922,2000,24,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.86817e-17;MQSB=0.0538898;RPB=0.730136;SGB=38.6418;VDB=0.299497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.1:16463427 chr01:016463427 0 W/16463427-16463427 FN3325-S SNP A -> G AC=1;AN=184;BQB=0.998532;DP=2975;DP4=1435,1440,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.09212e-06;MQSB=0.998039;RPB=0.722917;SGB=28.7043;VDB=0.852963;EFF=INTRON(MODIFIER||||657|LOC_Os01g29370|protein_coding|CODING|LOC_Os01g29370.1|4|1) FN1228-S.SNP.1:16467630 chr01:016467630 0 W/16467630-16467630 FN1228-S Single Base Substitution T-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1112-S.SNP.1:16471966 chr01:016471966 0 W/16471966-16471966 FN1112-S Single Base Substitution A-G INTRON HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2299.SNP.1:16480645 chr01:016480645 0 W/16480645-16480645 FN2299 SNP C -> T AC=1;AN=192;BQB=0.207697;DP=4640;DP4=2420,1967,16,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000431034;MQB=9.29459e-12;MQSB=0.106675;RPB=0.82914;SGB=13.6122;VDB=0.368804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P66L|586|LOC_Os01g29409|protein_coding|CODING|LOC_Os01g29409.1|1|1) FN2299.SNP.1:16480646 chr01:016480646 0 W/16480646-16480646 FN2299 SNP C -> T AC=1;AN=192;BQB=0.994447;DP=4639;DP4=2422,2001,14,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000431127;MQB=4.59488e-10;MQSB=0.132063;RPB=0.736246;SGB=85.7252;VDB=0.309311;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P66|586|LOC_Os01g29409|protein_coding|CODING|LOC_Os01g29409.1|1|1) FN975-S.SNP.1:16480980 chr01:016480980 0 W/16480980-16480980 FN975-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g29409 tRNA methyltransferase, putative, expressed SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN3794-S.SNP.1:16483558 chr01:016483558 0 W/16483558-16483558 FN3794-S SNP C -> A AC=1;AN=190;BQB=0.85406;DP=2421;DP4=1155,1191,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000210779;MQSB=0.990046;RPB=0.434785;SGB=30.8803;VDB=0.561637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T374N|586|LOC_Os01g29409|protein_coding|CODING|LOC_Os01g29409.1|4|1) FN2715-S.SNP.1:16494888 chr01:016494888 0 W/16494888-16494888 FN2715-S SNP A -> T AC=1;AN=200;BQB=0.271456;DP=4730;DP4=2234,2275,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61438e-10;MQSB=0.999911;RPB=0.382861;SGB=63.4749;VDB=0.451525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.1:16498624 chr01:016498624 0 W/16498624-16498624 FN1106-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2331.SNP.1:16503284 chr01:016503284 0 W/16503284-16503284 FN2331 SNP G -> A AC=1;AN=192;BQB=0.654086;DP=5157;DP4=2517,2295,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.50745e-12;MQSB=5.27477e-05;RPB=0.396095;SGB=-81.7287;VDB=0.140372;EFF=UTR_3_PRIME(MODIFIER||5788||657|LOC_Os01g29430|protein_coding|CODING|LOC_Os01g29430.1|4|1) FN2240-S.SNP.1:16503949 chr01:016503949 0 W/16503949-16503949 FN2240-S SNP G -> T AC=1;AN=190;BQB=0.856771;DP=5223;DP4=2616,2308,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16287e-07;MQSB=0.982648;RPB=0.86033;SGB=15.9981;VDB=0.717018;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.1:16507635 chr01:016507635 0 W/16507635-16507635 FN4105-S SNP G -> C AC=2;AN=182;BQB=0.799007;DP=2875;DP4=1370,1429,8,5;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.31405e-07;MQSB=0.983417;RPB=0.646774;SGB=35.6277;VDB=0.92;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K719N|1512|LOC_Os01g29450|protein_coding|CODING|LOC_Os01g29450.1|4|1) FN4105-S.SNP.1:16507636 chr01:016507636 0 W/16507636-16507636 FN4105-S SNP A -> T AC=2;AN=182;BQB=0.986972;DP=2874;DP4=1375,1425,6,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.21348e-08;MQSB=0.984292;RPB=0.610743;SGB=32.1169;VDB=0.899975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N720Y|1512|LOC_Os01g29450|protein_coding|CODING|LOC_Os01g29450.1|4|1) W706-3-1.SNP.1:16513116 chr01:016513116 0 W/16513116-16513116 W706-3-1 Single Base Substitution C-A INTRON HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN1103-S.SNP.1:16515155 chr01:016515155 0 W/16515155-16515155 FN1103-S Single Base Substitution T-G INTRON HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2165-S.SNP.1:16517649 chr01:016517649 0 W/16517649-16517649 FN2165-S SNP A -> C AC=2;AN=168;BQB=0.170797;DP=3921;DP4=2115,1734,28,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.85039e-19;MQSB=0.999789;RPB=0.420648;SGB=-201.44;VDB=0.197916;EFF=INTRON(MODIFIER||||199|LOC_Os01g29469|protein_coding|CODING|LOC_Os01g29469.1|2|1) FN3756-S.SNP.1:16518329 chr01:016518329 0 W/16518329-16518329 FN3756-S SNP A -> T AC=1;AN=190;BQB=0.955997;DP=2787;DP4=1300,1397,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.25599e-06;MQSB=0.970103;RPB=0.98771;SGB=35.4339;VDB=0.664517;EFF=INTRON(MODIFIER||||199|LOC_Os01g29469|protein_coding|CODING|LOC_Os01g29469.1|1|1) FN-289.SNP.1:16520981 chr01:016520981 0 W/16520981-16520981 FN-289 Single Base Substitution A-G INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN733-S.SNP.1:16530192 chr01:016530192 0 W/16530192-16530192 FN733-S Single Base Substitution C-T INTRON HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN2091-S.SNP.1:16532109 chr01:016532109 0 W/16532109-16532109 FN2091-S SNP C -> T AC=1;AN=168;BQB=0.999009;DP=3351;DP4=1816,1511,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.23237e-07;MQSB=0.998187;RPB=0.999966;SGB=24.4556;VDB=0.0633053;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H761|889|LOC_Os01g29488|protein_coding|CODING|LOC_Os01g29488.1|10|1) FN2183-S.SNP.1:16533318 chr01:016533318 0 W/16533318-16533318 FN2183-S SNP A -> C AC=1;AN=190;BQB=0.70097;DP=4634;DP4=2174,2119,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44915e-07;MQSB=0.78025;RPB=0.792107;SGB=23.6597;VDB=0.702026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.1:16543500 chr01:016543500 0 W/16543500-16543500 FN3309-S SNP C -> A AC=1;AN=184;BQB=0.849453;DP=3089;DP4=1618,1342,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.44935e-07;MQSB=0.99393;RPB=0.985779;SGB=57.786;VDB=0.95063;EFF=INTRON(MODIFIER||||647|LOC_Os01g29507|protein_coding|CODING|LOC_Os01g29507.1|3|1) FN714-S.SNP.1:16548889 chr01:016548889 0 W/16548889-16548889 FN714-S Single Base Substitution C-T INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN4240-S.SNP.1:16553799 chr01:016553799 0 W/16553799-16553799 FN4240-S SNP A -> C AC=2;AN=170;BQB=0.999772;DP=2684;DP4=1276,1341,8,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.49381e-11;MQSB=0.945144;RPB=0.939489;SGB=58.9766;VDB=0.81942;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcG|S718|1128|LOC_Os01g29530|protein_coding|CODING|LOC_Os01g29530.1|5|1) FN2664-S.SNP.1:16558674 chr01:016558674 0 W/16558674-16558674 FN2664-S SNP G -> T AC=2;AN=200;BQB=0.70348;DP=4756;DP4=2254,2239,34,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.98667e-39;MQSB=0.857682;RPB=0.356096;SGB=263.357;VDB=0.591628;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.1:16560679 chr01:016560679 0 W/16560679-16560679 FN378-S Single Base Substitution T-C INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN1446-S.SNP.1:16562424 chr01:016562424 0 W/16562424-16562424 FN1446-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2637-S.SNP.1:16565408 chr01:016565408 0 W/16565408-16565408 FN2637-S SNP T -> G AC=2;AN=200;BQB=0.33786;DP=4318;DP4=1805,2183,25,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.37864e-27;MQSB=0.624745;RPB=0.724623;SGB=59.2502;VDB=0.946682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.1:16565833 chr01:016565833 0 W/16565833-16565833 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.852614;DP=3126;DP4=1917,1169,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.56884e-10;MQSB=0.905877;RPB=0.306914;SGB=-12.7876;VDB=0.692845;EFF=INTRON(MODIFIER||||921|LOC_Os01g29560|protein_coding|CODING|LOC_Os01g29560.1|8|1) FN-222.SNP.1:16568656 chr01:016568656 0 W/16568656-16568656 FN-222 Single Base Substitution C-T INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-189.SNP.1:16569387 chr01:016569387 0 W/16569387-16569387 FN-189 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g29560 retrotransposon protein, putative, unclassified, expressed SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN771-S.SNP.1:16569396 chr01:016569396 0 W/16569396-16569396 FN771-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g29560 retrotransposon protein, putative, unclassified, expressed SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2332.SNP.1:16573752 chr01:016573752 0 W/16573752-16573752 FN2332 SNP C -> T AC=1;AN=192;BQB=0.993441;DP=5212;DP4=2700,2038,22,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.03226e-20;MQSB=0.868636;RPB=0.762704;SGB=-1.78867;VDB=0.271119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.1:16577699 chr01:016577699 0 W/16577699-16577699 FN2286 SNP G -> A AC=1;AN=192;BQB=0.228023;DP=4841;DP4=2406,2056,22,12;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0113613;MQB=0.00458732;MQSB=0.0546494;RPB=0.950222;SGB=33.9487;VDB=0.683553;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R501|873|LOC_Os01g29580|protein_coding|CODING|LOC_Os01g29580.1|2|1) FN-141.SNP.1:16584544 chr01:016584544 0 W/16584544-16584544 FN-141 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN_772-3-1.SNP.1:16586006 chr01:016586006 0 W/16586006-16586006 FN_772-3-1 Single Base Substitution C-T Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2229-S.SNP.1:16587120 chr01:016587120 0 W/16587120-16587120 FN2229-S SNP T -> A AC=2;AN=190;BQB=0.763113;DP=5079;DP4=2100,2496,34,46;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.35686e-30;MQSB=0.819776;RPB=0.974848;SGB=174.348;VDB=0.52845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.1:16591245 chr01:016591245 0 W/16591245-16591245 FN2559-S SNP A -> T AC=2;AN=198;BQB=0.867531;DP=4317;DP4=2047,1913,11,10;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000231642;MQB=7.19057e-12;MQSB=1.81775e-05;RPB=0.265429;SGB=39.7248;VDB=0.0646091;EFF=INTRON(MODIFIER||||254|LOC_Os01g29610|protein_coding|CODING|LOC_Os01g29610.1|2|1) FN3668-S.SNP.1:16594967 chr01:016594967 0 W/16594967-16594967 FN3668-S SNP G -> C AC=1;AN=190;BQB=0.924457;DP=2777;DP4=1455,1245,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01139e-05;MQSB=0.775042;RPB=0.986342;SGB=21.8853;VDB=0.880536;EFF=INTRON(MODIFIER||||254|LOC_Os01g29610|protein_coding|CODING|LOC_Os01g29610.1|7|1) FN1439-S.SNP.1:16596281 chr01:016596281 0 W/16596281-16596281 FN1439-S Single Base Substitution G-T INTRON HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2285.SNP.1:16596464 chr01:016596464 0 W/16596464-16596464 FN2285 SNP C -> G AC=1;AN=192;BQB=0.98693;DP=5087;DP4=2457,2267,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00019658;MQB=1.12434e-08;MQSB=0.985641;RPB=0.391498;SGB=2.66176;VDB=0.810923;EFF=INTRON(MODIFIER||||254|LOC_Os01g29610|protein_coding|CODING|LOC_Os01g29610.1|9|1) FN460-S.SNP.1:16596545 chr01:016596545 0 W/16596545-16596545 FN460-S Single Base Substitution T-C INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2364.SNP.1:16600418 chr01:016600418 0 W/16600418-16600418 FN2364 SNP A -> C AC=1;AN=192;BQB=0.292291;DP=4902;DP4=2180,2496,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.50292e-10;MQSB=0.997642;RPB=0.784165;SGB=26.3496;VDB=0.952243;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.1:16601881 chr01:016601881 0 W/16601881-16601881 FN1559-S Single Base Substitution T-C INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1033-S.SNP.1:16603406 chr01:016603406 0 W/16603406-16603406 FN1033-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1206-S.SNP.1:16606668 chr01:016606668 0 W/16606668-16606668 FN1206-S Single Base Substitution G-A INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN2200-S.SNP.1:16609470 chr01:016609470 0 W/16609470-16609470 FN2200-S SNP T -> C AC=1;AN=190;BQB=0.996925;DP=5126;DP4=2393,2324,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000195084;MQB=1.30905e-10;MQSB=0.46576;RPB=0.359377;SGB=85.5263;VDB=0.12166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.1:16614718 chr01:016614718 0 W/16614718-16614718 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.787674;DP=2963;DP4=1470,1354,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.54231e-05;MQSB=0.652352;RPB=0.710973;SGB=44.5415;VDB=0.97277;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.1:16621120 chr01:016621120 0 W/16621120-16621120 FN874-S Single Base Substitution C-T INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2386.SNP.1:16627004 chr01:016627004 0 W/16627004-16627004 FN2386 SNP A -> G AC=2;AN=192;BQB=0.213945;DP=4747;DP4=2028,2172,25,24;HOB=0.0206163;ICB=0.494846;MQ=29;MQ0F=0.0726775;MQB=0.626836;MQSB=0.595489;RPB=0.184871;SGB=-103.263;VDB=0.812686;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.1:16628943 chr01:016628943 0 W/16628943-16628943 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.94586;DP=3516;DP4=1592,1792,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000284414;MQB=1.73575e-07;MQSB=0.96766;RPB=0.999831;SGB=66.8296;VDB=0.543287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.1:16630862 chr01:016630862 0 W/16630862-16630862 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.973923;DP=2835;DP4=1407,1320,1,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.21172e-05;MQSB=0.724432;RPB=0.556434;SGB=26.1347;VDB=0.0366582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A362T|638|LOC_Os01g29680|protein_coding|CODING|LOC_Os01g29680.1|4|1) FN-69.SNP.1:16633458 chr01:016633458 0 W/16633458-16633458 FN-69 Single Base Substitution T-A INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN904-S.SNP.1:16640000 chr01:016640000 0 W/16640000-16640000 FN904-S Single Base Substitution G-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN4135-S.SNP.1:16659269 chr01:016659269 0 W/16659269-16659269 FN4135-S SNP C -> A AC=2;AN=182;BQB=0.778443;DP=2760;DP4=1459,1204,20,27;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.67307e-22;MQSB=0.999276;RPB=0.676697;SGB=201.02;VDB=0.796695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.1:16664592 chr01:016664592 0 W/16664592-16664592 FN1290-S Single Base Substitution C-T INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1527-S.SNP.1:16673745 chr01:016673745 0 W/16673745-16673745 FN1527-S Single Base Substitution T-C INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3496-S.SNP.1:16674060 chr01:016674060 0 W/16674060-16674060 FN3496-S SNP G -> A AC=1;AN=188;BQB=0.998239;DP=3315;DP4=1547,1684,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.71974e-10;MQSB=0.98501;RPB=0.315441;SGB=62.6088;VDB=0.460047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R1142C|1228|LOC_Os01g29760|protein_coding|CODING|LOC_Os01g29760.1|5|1) FN3549-S.SNP.1:16674937 chr01:016674937 0 W/16674937-16674937 FN3549-S SNP C -> T AC=1;AN=188;BQB=0.978212;DP=4346;DP4=2344,1923,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.21544e-07;MQSB=0.998319;RPB=0.260345;SGB=48.979;VDB=0.981836;EFF=INTRON(MODIFIER||||1228|LOC_Os01g29760|protein_coding|CODING|LOC_Os01g29760.1|4|1) FN1472-S.SNP.1:16675101 chr01:016675101 0 W/16675101-16675101 FN1472-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g29760 retrotransposon protein, putative, unclassified, expressed SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1030-S.SNP.1:16683757 chr01:016683757 0 W/16683757-16683757 FN1030-S Single Base Substitution G-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN1573-S.SNP.1:16686940 chr01:016686940 0 W/16686940-16686940 FN1573-S Single Base Substitution T-C INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1049-S.SNP.1:16687835 chr01:016687835 0 W/16687835-16687835 FN1049-S Single Base Substitution G-T INTRON HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3879-S.SNP.1:16687835 chr01:016687835 0 W/16687835-16687835 FN3879-S SNP G -> T AC=2;AN=158;BQB=0.99645;DP=2875;DP4=1428,1286,27,33;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.00452174;MQB=4.64189e-15;MQSB=0.605929;RPB=0.303606;SGB=182.733;VDB=0.882792;EFF=INTRON(MODIFIER||||56|LOC_Os01g29780|protein_coding|CODING|LOC_Os01g29780.1|3|1) FN2422.SNP.1:16694151 chr01:016694151 0 W/16694151-16694151 FN2422 SNP C -> T AC=2;AN=200;BQB=0.680415;DP=3902;DP4=1686,2002,24,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90524e-19;MQSB=0.812869;RPB=0.221516;SGB=187.814;VDB=0.355876;EFF=START_GAINED(LOW||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.1|1|1),START_GAINED(LOW||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.2|1|1),UTR_5_PRIME(MODIFIER||5829||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.1|1|1),UTR_5_PRIME(MODIFIER||5829||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.2|1|1) FN3948-S.SNP.1:16695562 chr01:016695562 0 W/16695562-16695562 FN3948-S SNP C -> T AC=2;AN=168;BQB=0.671443;DP=2569;DP4=1023,1343,16,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.5198e-24;MQSB=0.97313;RPB=0.925099;SGB=138.218;VDB=0.451259;EFF=INTRON(MODIFIER||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.2|1|1),INTRON(MODIFIER||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.1|1|1) FN2564-S.SNP.1:16696374 chr01:016696374 0 W/16696374-16696374 FN2564-S SNP G -> A AC=1;AN=198;BQB=0.987688;DP=4046;DP4=1975,1851,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00296589;MQB=2.32695e-07;MQSB=0.65808;RPB=0.443212;SGB=29.3443;VDB=0.150977;EFF=INTRON(MODIFIER||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.2|1|1),INTRON(MODIFIER||||102|LOC_Os01g29804|protein_coding|CODING|LOC_Os01g29804.1|1|1) FN2593-S.SNP.1:16702109 chr01:016702109 0 W/16702109-16702109 FN2593-S SNP C -> A AC=1;AN=198;BQB=0.59969;DP=4105;DP4=1841,2050,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31593e-10;MQSB=0.996663;RPB=0.673606;SGB=58.1246;VDB=0.150668;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.1:16702561 chr01:016702561 0 W/16702561-16702561 FN1062-S Single Base Substitution T-G INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN-119.SNP.1:16704052 chr01:016704052 0 W/16704052-16704052 FN-119 Single Base Substitution A-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3426-S.SNP.1:16706101 chr01:016706101 0 W/16706101-16706101 FN3426-S SNP A -> G AC=1;AN=184;BQB=0.935344;DP=3098;DP4=1574,1371,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14122e-06;MQSB=0.823167;RPB=0.817989;SGB=39.2697;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.1:16709369 chr01:016709369 0 W/16709369-16709369 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.256311;DP=4338;DP4=1834,2252,5,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000230521;MQB=2.40699e-10;MQSB=0.968318;RPB=0.438991;SGB=-10.2651;VDB=0.566319;EFF=UTR_3_PRIME(MODIFIER||2653||113|LOC_Os01g29820|protein_coding|CODING|LOC_Os01g29820.1|3|1) FN2574-S.SNP.1:16719702 chr01:016719702 0 W/16719702-16719702 FN2574-S SNP T -> A AC=1;AN=198;BQB=0.92139;DP=4124;DP4=1709,2177,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28916e-06;MQSB=0.732328;RPB=0.997019;SGB=11.1786;VDB=0.89913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1641-S.SNP.1:16726219 chr01:016726219 0 W/16726219-16726219 FN1641-S Single Base Substitution G-A INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2115-S.SNP.1:16732472 chr01:016732472 0 W/16732472-16732472 FN2115-S SNP T -> A AC=2;AN=168;BQB=0.713887;DP=3750;DP4=1924,1749,35,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.12752e-27;MQSB=0.998278;RPB=0.967458;SGB=2.29097;VDB=0.181945;EFF=INTRON(MODIFIER||||157|LOC_Os01g29870|protein_coding|CODING|LOC_Os01g29870.1|3|1) FN851-S.SNP.1:16745434 chr01:016745434 0 W/16745434-16745434 FN851-S Single Base Substitution C-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN1085-S.SNP.1:16746424 chr01:016746424 0 W/16746424-16746424 FN1085-S Single Base Substitution C-T INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3723-S.SNP.1:16767209 chr01:016767209 0 W/16767209-16767209 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.973573;DP=3101;DP4=1640,1328,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0499839;MQB=0.989486;MQSB=0.894954;RPB=0.798908;SGB=13.4442;VDB=0.140184;EFF=INTRON(MODIFIER||||1565|LOC_Os01g29900|protein_coding|CODING|LOC_Os01g29900.1|1|1) FN1473-S.SNP.1:16767809 chr01:016767809 0 W/16767809-16767809 FN1473-S Single Base Substitution C-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2325.SNP.1:16775166 chr01:016775166 0 W/16775166-16775166 FN2325 SNP T -> A AC=1;AN=192;BQB=0.393154;DP=4081;DP4=2126,1563,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0766969;MQB=0.982709;MQSB=0;RPB=0.769539;SGB=1.09742;VDB=0.702813;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.1:16776313 chr01:016776313 0 W/16776313-16776313 FN947-S Single Base Substitution G-A INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3426-S.SNP.1:16778591 chr01:016778591 0 W/16778591-16778591 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.0341123;DP=2625;DP4=1557,685,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.072381;MQB=0.74495;MQSB=0.173997;RPB=0.900194;SGB=-135.73;VDB=0.377852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.1:16779637 chr01:016779637 0 W/16779637-16779637 FN1658-S SNP T -> G AC=1;AN=188;BQB=1.58681e-08;DP=7246;DP4=3190,3887,15,30;HOB=5.65867e-05;ICB=0.000113775;MQ=12;MQ0F=0.594949;MQB=0.97181;MQSB=0;RPB=0.867842;SGB=-940.465;VDB=0.00674309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.1:16779637 chr01:016779637 0 W/16779637-16779637 FN3557-S SNP T -> G AC=1;AN=188;BQB=0.293199;DP=3994;DP4=2005,1583,30,6;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.283926;MQB=0.998956;MQSB=0;RPB=0.00123356;SGB=-368.976;VDB=0.0271085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.1:16780050 chr01:016780050 0 W/16780050-16780050 FN2713-S SNP T -> C AC=1;AN=200;BQB=0.812756;DP=7554;DP4=2637,4368,11,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0496426;MQB=0.873698;MQSB=0;RPB=0.642768;SGB=81.8956;VDB=0.903782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.1:16784566 chr01:016784566 0 W/16784566-16784566 FN2325 SNP G -> T AC=1;AN=192;BQB=0.0161247;DP=6039;DP4=2724,2664,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0294751;MQB=0.568496;MQSB=2.36034e-09;RPB=0.146255;SGB=-284.157;VDB=0.548991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.1:16798379 chr01:016798379 0 W/16798379-16798379 FN2254-S SNP C -> T AC=1;AN=190;BQB=0.011714;DP=9025;DP4=3193,4800,14,21;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0106371;MQB=0.000808064;MQSB=0.469737;RPB=0.896053;SGB=-439.395;VDB=0.990052;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.1:16815618 chr01:016815618 0 W/16815618-16815618 FN983-S Single Base Substitution C-G INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN318-S.SNP.1:16821406 chr01:016821406 0 W/16821406-16821406 FN318-S Single Base Substitution C-T INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1615-S.SNP.1:16821536 chr01:016821536 0 W/16821536-16821536 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2491.SNP.1:16821871 chr01:016821871 0 W/16821871-16821871 FN2491 SNP A -> G AC=2;AN=200;BQB=0.0806815;DP=3508;DP4=1300,1909,9,14;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0615735;MQB=0.860118;MQSB=1.10549e-05;RPB=0.128022;SGB=45.1159;VDB=0.00606227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.1:16821881 chr01:016821881 0 W/16821881-16821881 FN1200-S Single Base Substitution C-T INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN671-S.SNP.1:16829295 chr01:016829295 0 W/16829295-16829295 FN671-S Single Base Substitution G-T INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN4100-S.SNP.1:16829957 chr01:016829957 0 W/16829957-16829957 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.927903;DP=3164;DP4=1316,1655,18,16;HOB=6.03792e-05;ICB=0.000121422;MQ=26;MQ0F=0.287927;MQB=0.103848;MQSB=2.10709e-20;RPB=0.340789;SGB=109.356;VDB=0.800954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.1:16831010 chr01:016831010 0 W/16831010-16831010 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.536577;DP=2862;DP4=1507,1241,28,69;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0607966;MQB=7.16681e-34;MQSB=4.05106e-10;RPB=8.51249e-26;SGB=-1436.47;VDB=9.23883e-18;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.1:16831429 chr01:016831429 0 W/16831429-16831429 FN1379-S Single Base Substitution C-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN3987-S.SNP.1:16832183 chr01:016832183 0 W/16832183-16832183 FN3987-S SNP G -> T AC=2;AN=168;BQB=0.998458;DP=2754;DP4=1308,1253,16,17;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00145243;MQB=6.86605e-12;MQSB=0.0180706;RPB=0.852011;SGB=140.789;VDB=0.00952525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.1:16833463 chr01:016833463 0 W/16833463-16833463 FN2591-S SNP A -> G AC=1;AN=198;BQB=0.94888;DP=3822;DP4=1919,1703,3,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000261643;MQB=0.000104375;MQSB=0.0306199;RPB=0.953672;SGB=58.7391;VDB=0.472475;EFF=INTRON(MODIFIER||||1116|LOC_Os01g29910|protein_coding|CODING|LOC_Os01g29910.1|1|1) FN1281-S.SNP.1:16834142 chr01:016834142 0 W/16834142-16834142 FN1281-S Single Base Substitution C-T INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN4172-S.SNP.1:16834936 chr01:016834936 0 W/16834936-16834936 FN4172-S SNP C -> T AC=2;AN=170;BQB=0.948442;DP=2537;DP4=1304,1086,10,14;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00315333;MQB=3.90623e-06;MQSB=1.642e-07;RPB=0.632596;SGB=101.184;VDB=0.622864;EFF=INTRON(MODIFIER||||1116|LOC_Os01g29910|protein_coding|CODING|LOC_Os01g29910.1|2|1) FN2621-S.SNP.1:16835654 chr01:016835654 0 W/16835654-16835654 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.906762;DP=4383;DP4=1916,2148,21,8;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0054757;MQB=0.0544137;MQSB=0.000519522;RPB=0.518657;SGB=94.3471;VDB=0.678241;EFF=INTRON(MODIFIER||||1116|LOC_Os01g29910|protein_coding|CODING|LOC_Os01g29910.1|2|1) FN1273-S.SNP.1:16838106 chr01:016838106 0 W/16838106-16838106 FN1273-S Single Base Substitution C-T INTRON HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN3924-S.SNP.1:16839296 chr01:016839296 0 W/16839296-16839296 FN3924-S SNP C -> G AC=1;AN=158;BQB=0.989051;DP=2639;DP4=1400,1135,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=27;MQ0F=0.178098;MQB=0.589022;MQSB=5.0387e-10;RPB=0.984747;SGB=55.806;VDB=0.871028;EFF=INTRON(MODIFIER||||1116|LOC_Os01g29910|protein_coding|CODING|LOC_Os01g29910.1|6|1) FN2723-S.SNP.1:16851299 chr01:016851299 0 W/16851299-16851299 FN2723-S SNP C -> T AC=1;AN=200;BQB=4.83377e-13;DP=4722;DP4=1591,2001,77,281;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00232952;MQB=0;MQSB=0.000151721;RPB=0;SGB=-2750.29;VDB=1.99467e-07;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.1:16860325 chr01:016860325 0 W/16860325-16860325 FN1277-S Single Base Substitution G-C INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1277-S.SNP.1:16860480 chr01:016860480 0 W/16860480-16860480 FN1277-S Single Base Substitution T-G INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3370-S.SNP.1:16869155 chr01:016869155 0 W/16869155-16869155 FN3370-S SNP T -> A AC=1;AN=184;BQB=0.369765;DP=3473;DP4=1683,1595,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.0967463;MQB=0.33336;MQSB=0.822074;RPB=0.994685;SGB=35.7479;VDB=0.966792;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.1:16874008 chr01:016874008 0 W/16874008-16874008 FN729-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os01g30936 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1203-S.SNP.1:16874761 chr01:016874761 0 W/16874761-16874761 FN1203-S Single Base Substitution C-A INTRON HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN2629-S.SNP.1:16881365 chr01:016881365 0 W/16881365-16881365 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.180462;DP=11054;DP4=5278,4976,21,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0104035;MQB=0.186088;MQSB=0;RPB=0.999432;SGB=60.747;VDB=0.285854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.1:16882650 chr01:016882650 0 W/16882650-16882650 FN3593-S SNP C -> A AC=1;AN=190;BQB=0.999786;DP=5112;DP4=2447,2443,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0248435;MQB=0.986114;MQSB=0.251901;RPB=0.675822;SGB=53.8699;VDB=0.956446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.1:16884303 chr01:016884303 0 W/16884303-16884303 FN3933-S SNP C -> T AC=1;AN=158;BQB=0.251817;DP=4916;DP4=1753,2739,11,4;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.126526;MQB=0.948197;MQSB=0;RPB=0.666801;SGB=21.4493;VDB=0.398222;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.1:16884795 chr01:016884795 0 W/16884795-16884795 FN858-S Single Base Substitution G-A INTRON HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3599-S.SNP.1:16890129 chr01:016890129 0 W/16890129-16890129 FN3599-S SNP G -> C AC=1;AN=188;BQB=0.69143;DP=3107;DP4=1007,2034,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.310267;MQB=0.00163021;MQSB=0;RPB=0.0302959;SGB=80.782;VDB=0.111864;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.1:16895157 chr01:016895157 0 W/16895157-16895157 FN-198 Single Base Substitution T-C INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN3480-S.SNP.1:16899781 chr01:016899781 0 W/16899781-16899781 FN3480-S SNP T -> G AC=2;AN=184;BQB=0.000837222;DP=3067;DP4=853,1027,74,56;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.00195631;MQB=1.1883e-42;MQSB=0.747509;RPB=0.674032;SGB=-1031.63;VDB=0.999928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.1:16902509 chr01:016902509 0 W/16902509-16902509 FN1556-S Single Base Substitution G-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN627-S.SNP.1:16913240 chr01:016913240 0 W/16913240-16913240 FN627-S Single Base Substitution T-C INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN627-S.SNP.1:16913581 chr01:016913581 0 W/16913581-16913581 FN627-S Single Base Substitution C-G INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2655-S.SNP.1:16914639 chr01:016914639 0 W/16914639-16914639 FN2655-S SNP C -> A AC=1;AN=200;BQB=0.844109;DP=3585;DP4=1883,1425,10,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00251046;MQB=2.83806e-05;MQSB=2.68166e-26;RPB=0.883835;SGB=29.4849;VDB=0.344482;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.1:16914760 chr01:016914760 0 W/16914760-16914760 FN457-S Single Base Substitution G-C INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN4100-S.SNP.1:16914866 chr01:016914866 0 W/16914866-16914866 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.761304;DP=2838;DP4=1315,1236,19,10;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00458069;MQB=4.8338e-11;MQSB=0.0279102;RPB=0.924736;SGB=91.8015;VDB=0.415423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.1:16915558 chr01:016915558 0 W/16915558-16915558 FN2200-S SNP C -> A AC=1;AN=190;BQB=0.141005;DP=4390;DP4=1863,2136,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00159453;MQB=5.59123e-07;MQSB=0.719827;RPB=0.542813;SGB=-139.857;VDB=0.836719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.1:16917043 chr01:016917043 0 W/16917043-16917043 FN3384-S SNP T -> G AC=1;AN=184;BQB=0.0738869;DP=3440;DP4=1417,1804,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.69743e-05;MQSB=0.820152;RPB=0.629152;SGB=6.80232;VDB=0.879541;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.1:16918863 chr01:016918863 0 W/16918863-16918863 FN1499-S Single Base Substitution G-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4002-S.SNP.1:16925205 chr01:016925205 0 W/16925205-16925205 FN4002-S SNP C -> T AC=1;AN=168;BQB=0.900411;DP=3352;DP4=1366,1836,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0951671;MQB=0.997673;MQSB=7.9566e-08;RPB=0.618388;SGB=39.2004;VDB=0.152095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.1:16925804 chr01:016925804 0 W/16925804-16925804 FN2703-S SNP A -> C AC=1;AN=200;BQB=0.12315;DP=4810;DP4=2031,2482,3,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.100832;MQB=0.0533156;MQSB=0.911701;RPB=0.737598;SGB=19.0642;VDB=0.358296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.1:16929932 chr01:016929932 0 W/16929932-16929932 FN2702-S SNP T -> C AC=1;AN=200;BQB=0.750812;DP=4527;DP4=2197,2124,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25983e-05;MQSB=0.998766;RPB=0.97213;SGB=45.0543;VDB=0.510754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:16933074 chr01:016933074 0 W/16933074-16933074 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.346366;DP=9225;DP4=4628,4020,17,16;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0355556;MQB=0.161538;MQSB=5.79659e-05;RPB=0.843396;SGB=33.5675;VDB=0.579669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D517N|730|LOC_Os01g30980|protein_coding|CODING|LOC_Os01g30980.1|6|1) FN436-S.SNP.1:16933074 chr01:016933074 0 W/16933074-16933074 FN436-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g30980 retrotransposon protein, putative, unclassified, expressed SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3677-S.SNP.1:16937593 chr01:016937593 0 W/16937593-16937593 FN3677-S SNP C -> G AC=1;AN=190;BQB=0.930094;DP=2817;DP4=1399,1317,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.32528e-08;MQSB=0.820836;RPB=0.999885;SGB=53.6492;VDB=0.17733;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.1:16939786 chr01:016939786 0 W/16939786-16939786 FN_N1-202-3 Single Base Substitution C-G HET LOC_Os01g30990 transposon protein, putative, unclassified SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2265-S.SNP.1:16940253 chr01:016940253 0 W/16940253-16940253 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.633195;DP=9360;DP4=4617,4085,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0195513;MQB=0.647691;MQSB=4.44789e-22;RPB=0.821851;SGB=46.6446;VDB=0.728287;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.1:16940853 chr01:016940853 0 W/16940853-16940853 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.99744;DP=6238;DP4=3387,2737,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0344662;MQB=0.140251;MQSB=4.33176e-10;RPB=0.945955;SGB=65.6427;VDB=0.670634;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.1:16943538 chr01:016943538 0 W/16943538-16943538 FN1431-S Single Base Substitution G-C INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN2625-S.SNP.1:16946836 chr01:016946836 0 W/16946836-16946836 FN2625-S SNP C -> G AC=2;AN=200;BQB=0.974376;DP=3811;DP4=1685,1722,25,27;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00183679;MQB=3.06594e-18;MQSB=0.0369699;RPB=0.0459888;SGB=45.1366;VDB=0.473133;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.1:16947606 chr01:016947606 0 W/16947606-16947606 FN805-S Single Base Substitution G-A INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1554-S.SNP.1:16948631 chr01:016948631 0 W/16948631-16948631 FN1554-S Single Base Substitution C-T INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN627-S.SNP.1:16949347 chr01:016949347 0 W/16949347-16949347 FN627-S Single Base Substitution A-G INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3354-S.SNP.1:16960226 chr01:016960226 0 W/16960226-16960226 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.904147;DP=3375;DP4=1899,1300,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0761481;MQB=0.95204;MQSB=7.63724e-13;RPB=0.068551;SGB=48.7425;VDB=0.722689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.1:16961997 chr01:016961997 0 W/16961997-16961997 FN3563-S SNP C -> T AC=1;AN=188;BQB=0.950652;DP=5181;DP4=2690,2336,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0364898;MQSB=0.0037932;RPB=0.462313;SGB=57.244;VDB=0.948392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A98V|750|LOC_Os01g31020|protein_coding|CODING|LOC_Os01g31020.1|3|1) FN1080-S.SNP.1:16962520 chr01:016962520 0 W/16962520-16962520 FN1080-S Single Base Substitution T-G SPLICE_SITE_REGION HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3095-S.SNP.1:16964344 chr01:016964344 0 W/16964344-16964344 FN3095-S SNP G -> T AC=1;AN=184;BQB=0.740065;DP=5876;DP4=2690,3034,16,16;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00238257;MQB=0.1015;MQSB=0.981609;RPB=0.219298;SGB=66.1455;VDB=0.178545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L624F|750|LOC_Os01g31020|protein_coding|CODING|LOC_Os01g31020.1|6|1) FN1014-S.SNP.1:16965235 chr01:016965235 0 W/16965235-16965235 FN1014-S Single Base Substitution G-A INTRON HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN460-S.SNP.1:16966274 chr01:016966274 0 W/16966274-16966274 FN460-S Single Base Substitution T-A INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2592-S.SNP.1:16967092 chr01:016967092 0 W/16967092-16967092 FN2592-S SNP C -> A AC=1;AN=198;BQB=0.831124;DP=3917;DP4=1950,1766,18,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00306357;MQB=2.46464e-09;MQSB=0.912534;RPB=0.991341;SGB=83.2905;VDB=0.847759;EFF=INTRON(MODIFIER||||750|LOC_Os01g31020|protein_coding|CODING|LOC_Os01g31020.1|10|1) FN1528-S.SNP.1:16969455 chr01:016969455 0 W/16969455-16969455 FN1528-S Single Base Substitution T-G INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2600-S.SNP.1:16971299 chr01:016971299 0 W/16971299-16971299 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.734615;DP=4243;DP4=2001,2017,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0179119;MQB=0.00229617;MQSB=0.591473;RPB=0.0608698;SGB=109.285;VDB=0.0502454;EFF=UTR_3_PRIME(MODIFIER||4411||750|LOC_Os01g31020|protein_coding|CODING|LOC_Os01g31020.1|13|1) FN2190-S.SNP.1:16972113 chr01:016972113 0 W/16972113-16972113 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.910663;DP=4662;DP4=2257,2140,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41488e-17;MQSB=0.996308;RPB=0.995771;SGB=103.624;VDB=0.868823;EFF=INTRON(MODIFIER||||750|LOC_Os01g31020|protein_coding|CODING|LOC_Os01g31020.1|13|1) FN3850-S.SNP.1:16974850 chr01:016974850 0 W/16974850-16974850 FN3850-S SNP T -> A AC=2;AN=158;BQB=0.993359;DP=2871;DP4=1647,1053,8,13;HOB=0.024996;ICB=0.493752;MQ=27;MQ0F=0.33612;MQB=0.390743;MQSB=0;RPB=0.899742;SGB=61.029;VDB=0.660221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M24K|91|LOC_Os01g31030|protein_coding|CODING|LOC_Os01g31030.1|1|1) FN3050-S.SNP.1:16982112 chr01:016982112 0 W/16982112-16982112 FN3050-S SNP A -> C AC=2;AN=184;BQB=0.685004;DP=3034;DP4=1502,1404,13,21;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0191167;MQB=0.0136732;MQSB=8.93911e-15;RPB=0.701404;SGB=71.1891;VDB=0.85688;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.1:16990159 chr01:016990159 0 W/16990159-16990159 FN931-S Single Base Substitution C-T INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3733-S.SNP.1:16991588 chr01:016991588 0 W/16991588-16991588 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.542278;DP=3061;DP4=1551,1400,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00718719;MQB=0.918973;MQSB=6.61221e-19;RPB=0.829241;SGB=23.6597;VDB=0.46574;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K272|409|LOC_Os01g31080|protein_coding|CODING|LOC_Os01g31080.1|5|1) FN571-S.SNP.1:16991759 chr01:016991759 0 W/16991759-16991759 FN571-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2629-S.SNP.1:16995427 chr01:016995427 0 W/16995427-16995427 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.814698;DP=4814;DP4=2062,2498,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.21086e-14;MQSB=0.537256;RPB=0.575216;SGB=87.1368;VDB=0.828453;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.1:16995742 chr01:016995742 0 W/16995742-16995742 FN4050-S SNP C -> T AC=1;AN=168;BQB=0.608344;DP=2634;DP4=1133,1290,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.78448e-11;MQSB=0.934658;RPB=0.982352;SGB=46.4929;VDB=0.932866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:16998445 chr01:016998445 0 W/16998445-16998445 FN2498 SNP T -> C AC=1;AN=200;BQB=0.841533;DP=2017;DP4=206,1395,1,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.302e-05;MQSB=2.25169e-07;RPB=0.963647;SGB=35.8441;VDB=0.0496804;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.1:16998698 chr01:016998698 0 W/16998698-16998698 FN4201-S SNP C -> T AC=2;AN=170;BQB=0.730576;DP=1917;DP4=833,972,14,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.01609e-10;MQSB=0.983366;RPB=0.16681;SGB=87.856;VDB=0.879388;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.1:16999007 chr01:016999007 0 W/16999007-16999007 FN1089-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g31090 expressed protein SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. W466-5-1.SNP.1:17000111 chr01:017000111 0 W/17000111-17000111 W466-5-1 Single Base Substitution C-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1269-S.SNP.1:17004927 chr01:017004927 0 W/17004927-17004927 FN1269-S Single Base Substitution T-G INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2596-S.SNP.1:17006053 chr01:017006053 0 W/17006053-17006053 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.536113;DP=3903;DP4=1886,1836,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00261779;MQSB=0.918096;RPB=0.980026;SGB=-1.81641;VDB=0.877276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A145T|217|LOC_Os01g31100|protein_coding|CODING|LOC_Os01g31100.1|2|1) FN777-S.SNP.1:17007245 chr01:017007245 0 W/17007245-17007245 FN777-S Single Base Substitution G-A INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2725-S.SNP.1:17010469 chr01:017010469 0 W/17010469-17010469 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.401749;DP=5089;DP4=2409,2381,15,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000196502;MQB=2.47676e-15;MQSB=1.87081e-05;RPB=0.267228;SGB=-42.0277;VDB=0.122055;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.1:17023865 chr01:017023865 0 W/17023865-17023865 FN1094-S Single Base Substitution C-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-61.SNP.1:17028440 chr01:017028440 0 W/17028440-17028440 FN-61 Single Base Substitution G-T INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN443-S.SNP.1:17030644 chr01:017030644 0 W/17030644-17030644 FN443-S Single Base Substitution C-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3815-S.SNP.1:17034766 chr01:017034766 0 W/17034766-17034766 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.968459;DP=3002;DP4=1481,1417,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26813e-05;MQSB=0.838617;RPB=0.99186;SGB=30.8803;VDB=0.360182;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.1:17039902 chr01:017039902 0 W/17039902-17039902 FN791-S Single Base Substitution C-A INTRON HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3512-S.SNP.1:17040391 chr01:017040391 0 W/17040391-17040391 FN3512-S SNP G -> A AC=2;AN=188;BQB=0.855487;DP=2879;DP4=1230,1555,13,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000347343;MQB=2.05049e-13;MQSB=0.445836;RPB=0.986109;SGB=112.585;VDB=0.373065;EFF=INTRON(MODIFIER||||481|LOC_Os01g31160|protein_coding|CODING|LOC_Os01g31160.1|3|1) FN1124-S.SNP.1:17043865 chr01:017043865 0 W/17043865-17043865 FN1124-S Single Base Substitution C-T INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2537-S.SNP.1:17051369 chr01:017051369 0 W/17051369-17051369 FN2537-S SNP C -> A AC=2;AN=198;BQB=0.854947;DP=3556;DP4=1624,1731,7,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00337458;MQB=3.7175e-09;MQSB=0.00024511;RPB=0.784246;SGB=81.7147;VDB=0.922525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.1:17054878 chr01:017054878 0 W/17054878-17054878 FN1679-S SNP A -> G AC=2;AN=188;BQB=0.281132;DP=2288;DP4=1134,1100,16,12;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.166521;MQB=0.633808;MQSB=2.6519e-16;RPB=0.515818;SGB=-8.48022;VDB=0.0878944;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G1032|1152|LOC_Os01g31190|protein_coding|CODING|LOC_Os01g31190.1|3|1) FN940-S.SNP.1:17055536 chr01:017055536 0 W/17055536-17055536 FN940-S Single Base Substitution C-T STOP_GAINED HET LOC_Os01g31190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3911-S.SNP.1:17056201 chr01:017056201 0 W/17056201-17056201 FN3911-S SNP C -> T AC=1;AN=158;BQB=0.974284;DP=2973;DP4=1429,1443,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0484359;MQB=0.515084;MQSB=2.58173e-13;RPB=0.825912;SGB=40.8124;VDB=0.0138273;EFF=INTRON(MODIFIER||||1152|LOC_Os01g31190|protein_coding|CODING|LOC_Os01g31190.1|1|1) FN-170.SNP.1:17056545 chr01:017056545 0 W/17056545-17056545 FN-170 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g31190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3306-S.SNP.1:17058643 chr01:017058643 0 W/17058643-17058643 FN3306-S SNP C -> T AC=1;AN=184;BQB=0.924665;DP=3620;DP4=1426,2092,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0116022;MQB=6.14973e-08;MQSB=0.893825;RPB=0.968215;SGB=71.3514;VDB=0.274624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.1:17059663 chr01:017059663 0 W/17059663-17059663 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.919958;DP=2653;DP4=1302,1267,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.00378e-06;MQSB=0.50919;RPB=0.588904;SGB=38.3284;VDB=0.125735;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A253V|378|LOC_Os01g31200|protein_coding|CODING|LOC_Os01g31200.1|4|1) FN3438-S.SNP.1:17063111 chr01:017063111 0 W/17063111-17063111 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.967233;DP=3192;DP4=1755,1317,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0159774;MQB=4.07235e-06;MQSB=3.87409e-16;RPB=0.991305;SGB=74.4875;VDB=0.768088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.1:17064482 chr01:017064482 0 W/17064482-17064482 FN3714-S SNP A -> T AC=1;AN=190;BQB=0.0839461;DP=2075;DP4=1022,881,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.37028e-06;MQSB=0.0111216;RPB=0.816329;SGB=16.5421;VDB=0.788782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.1:17067205 chr01:017067205 0 W/17067205-17067205 FN3918-S SNP A -> G AC=1;AN=158;BQB=0.919727;DP=2352;DP4=1138,1122,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.84058e-12;MQSB=0.991788;RPB=0.290846;SGB=77.6532;VDB=0.730511;EFF=UTR_3_PRIME(MODIFIER||63||493|LOC_Os01g31220|protein_coding|CODING|LOC_Os01g31220.1|4|1),UTR_3_PRIME(MODIFIER||63||297|LOC_Os01g31220|protein_coding|CODING|LOC_Os01g31220.2|3|1) FN2230-S.SNP.1:17071998 chr01:017071998 0 W/17071998-17071998 FN2230-S SNP T -> A AC=1;AN=190;BQB=0.00414301;DP=3761;DP4=1405,1584,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.6199e-06;MQSB=5.97107e-05;RPB=0.95209;SGB=-40.3396;VDB=0.706759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.1:17077781 chr01:017077781 0 W/17077781-17077781 FN2607-S SNP C -> G AC=1;AN=198;BQB=0.994851;DP=3821;DP4=1922,1705,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01962e-09;MQSB=0.891201;RPB=0.455487;SGB=65.3149;VDB=0.971586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.1:17081728 chr01:017081728 0 W/17081728-17081728 FN2217-S SNP C -> A AC=1;AN=190;BQB=0.991141;DP=4775;DP4=2237,2180,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209424;MQB=2.20163e-14;MQSB=0.972759;RPB=0.986985;SGB=16.5421;VDB=0.635578;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.1:17085280 chr01:017085280 0 W/17085280-17085280 FN589-S Single Base Substitution C-A INTRON HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-182.SNP.1:17086541 chr01:017086541 0 W/17086541-17086541 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3827-S.SNP.1:17088268 chr01:017088268 0 W/17088268-17088268 FN3827-S SNP C -> G AC=1;AN=190;BQB=0.994126;DP=2688;DP4=1575,985,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39357e-12;MQSB=0.963509;RPB=0.752061;SGB=99.1879;VDB=0.187671;EFF=INTERGENIC(MODIFIER||||||||||1) FN-401.SNP.1:17089600 chr01:017089600 0 W/17089600-17089600 FN-401 Single Base Substitution C-T INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN3727-S.SNP.1:17089749 chr01:017089749 0 W/17089749-17089749 FN3727-S SNP G -> A AC=2;AN=190;BQB=0.304232;DP=2707;DP4=1188,1390,14,15;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0443295;MQB=0.415003;MQSB=0.00710112;RPB=0.928514;SGB=126.511;VDB=0.754522;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.1:17090138 chr01:017090138 0 W/17090138-17090138 FN399-S Single Base Substitution C-T INTERGENIC HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1270-S.SNP.1:17090217 chr01:017090217 0 W/17090217-17090217 FN1270-S Single Base Substitution G-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2483.SNP.1:17090628 chr01:017090628 0 W/17090628-17090628 FN2483 SNP G -> A AC=1;AN=200;BQB=0.228926;DP=3584;DP4=1469,1829,6,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000558036;MQB=5.14141e-07;MQSB=0.966219;RPB=0.881661;SGB=51.0851;VDB=0.777389;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:17090789 chr01:017090789 0 W/17090789-17090789 FN2498 SNP G -> A AC=2;AN=200;BQB=0.613152;DP=3494;DP4=1374,1819,11,17;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00715512;MQB=2.00422e-11;MQSB=9.11473e-07;RPB=0.606343;SGB=123.342;VDB=0.0238121;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:17090790 chr01:017090790 0 W/17090790-17090790 FN2498 SNP G -> A AC=2;AN=200;BQB=0.178492;DP=3470;DP4=1368,1792,10,17;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00720461;MQB=3.05269e-11;MQSB=1.56913e-07;RPB=0.680165;SGB=118.737;VDB=0.0165703;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.1:17092285 chr01:017092285 0 W/17092285-17092285 FN982-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g31250 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN_N1-119-1.SNP.1:17092960 chr01:017092960 0 W/17092960-17092960 FN_N1-119-1 Single Base Substitution C-T Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN_N1-119-1.SNP.1:17092961 chr01:017092961 0 W/17092961-17092961 FN_N1-119-1 Single Base Substitution T-G Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3781-S.SNP.1:17094403 chr01:017094403 0 W/17094403-17094403 FN3781-S SNP T -> A AC=1;AN=190;BQB=0.910568;DP=2853;DP4=1437,1329,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0182264;MQB=4.08552e-07;MQSB=0.356176;RPB=0.967239;SGB=62.7569;VDB=0.337982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N635I|935|LOC_Os01g31260|protein_coding|CODING|LOC_Os01g31260.1|4|1) FN2680-S.SNP.1:17097946 chr01:017097946 0 W/17097946-17097946 FN2680-S SNP T -> C AC=2;AN=200;BQB=0.977792;DP=4922;DP4=2491,2170,32,30;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0111743;MQB=7.55397e-10;MQSB=0.469944;RPB=0.797533;SGB=279.918;VDB=0.776777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.1:17099704 chr01:017099704 0 W/17099704-17099704 FN2398 SNP G -> A AC=1;AN=200;BQB=0.995477;DP=3361;DP4=1367,1767,7,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.98312e-09;MQSB=0.894969;RPB=0.317113;SGB=6.27959;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.1:17107056 chr01:017107056 0 W/17107056-17107056 FN-409 Single Base Substitution A-T INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN2324.SNP.1:17111833 chr01:017111833 0 W/17111833-17111833 FN2324 SNP G -> A AC=1;AN=192;BQB=0.955593;DP=4916;DP4=2516,2065,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.08218e-15;MQSB=0.734588;RPB=0.51658;SGB=18.3052;VDB=0.293708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.1:17114564 chr01:017114564 0 W/17114564-17114564 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.203636;DP=4905;DP4=2384,2319,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203874;MQB=3.52946e-13;MQSB=0.858456;RPB=0.670362;SGB=87.1368;VDB=0.889291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.1:17116817 chr01:017116817 0 W/17116817-17116817 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.990587;DP=4427;DP4=2292,1764,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.25985e-09;MQSB=0.891929;RPB=0.772448;SGB=85.5263;VDB=0.205273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.1:17116821 chr01:017116821 0 W/17116821-17116821 FN2265-S SNP G -> A AC=2;AN=190;BQB=0.977966;DP=4412;DP4=2317,1721,22,30;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.91349e-28;MQSB=0.73998;RPB=0.940267;SGB=174.702;VDB=0.785411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.1:17116823 chr01:017116823 0 W/17116823-17116823 FN2265-S SNP T -> C AC=2;AN=190;BQB=0.694709;DP=4427;DP4=2325,1634,22,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.91611e-27;MQSB=0.950244;RPB=0.976699;SGB=213.035;VDB=0.514665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.1:17116878 chr01:017116878 0 W/17116878-17116878 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.965683;DP=2880;DP4=1264,1454,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23221e-08;MQSB=0.282021;RPB=0.622185;SGB=46.6141;VDB=0.706638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.1:17122846 chr01:017122846 0 W/17122846-17122846 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.979677;DP=3723;DP4=1940,1707,13,17;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00832662;MQB=0.10489;MQSB=9.70979e-10;RPB=0.922724;SGB=130.758;VDB=0.462244;EFF=INTRON(MODIFIER||||150|LOC_Os01g31300|protein_coding|CODING|LOC_Os01g31300.1|2|1) FN2387.SNP.1:17123027 chr01:017123027 0 W/17123027-17123027 FN2387 SNP G -> A AC=1;AN=192;BQB=0.357104;DP=5229;DP4=2729,2173,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0543125;MQB=0.975636;MQSB=1.91234e-13;RPB=0.620446;SGB=-121.055;VDB=0.940081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A130T|150|LOC_Os01g31300|protein_coding|CODING|LOC_Os01g31300.1|3|1) FN3424-S.SNP.1:17129692 chr01:017129692 0 W/17129692-17129692 FN3424-S SNP A -> C AC=1;AN=184;BQB=0.478164;DP=2996;DP4=1413,1328,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00166889;MQB=0.00335668;MQSB=0.059288;RPB=0.985567;SGB=32.2261;VDB=0.704349;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.1:17131633 chr01:017131633 0 W/17131633-17131633 FN4221-S SNP A -> T AC=2;AN=170;BQB=0.00154518;DP=2508;DP4=1015,1043,22,15;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.00119617;MQB=4.91745e-07;MQSB=0.030538;RPB=0.670718;SGB=-248.796;VDB=0.920125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.1:17132446 chr01:017132446 0 W/17132446-17132446 FN3389-S SNP G -> C AC=1;AN=184;BQB=0.239835;DP=2954;DP4=1347,1310,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00101557;MQB=0.00248728;MQSB=0.780239;RPB=0.969102;SGB=42.7914;VDB=0.822343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.1:17132835 chr01:017132835 0 W/17132835-17132835 FN2082-S SNP G -> T AC=1;AN=168;BQB=0.812296;DP=3474;DP4=1809,1628,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.51762e-07;MQSB=0.998288;RPB=0.665916;SGB=1.32907;VDB=0.377677;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.1:17135019 chr01:017135019 0 W/17135019-17135019 FN2470 SNP C -> T AC=1;AN=200;BQB=0.394522;DP=4161;DP4=1805,2069,8,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00240327;MQB=3.05805e-07;MQSB=0.00495906;RPB=0.879647;SGB=43.8747;VDB=0.773365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:17135189 chr01:017135189 0 W/17135189-17135189 FN2725-S SNP T -> G AC=2;AN=200;BQB=0.000413546;DP=4746;DP4=1696,2310,34,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.17062e-16;MQSB=0.616974;RPB=0.217496;SGB=-1011.34;VDB=0.197961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.1:17142172 chr01:017142172 0 W/17142172-17142172 FN1071-S Single Base Substitution C-T INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3997-S.SNP.1:17147110 chr01:017147110 0 W/17147110-17147110 FN3997-S SNP T -> C AC=1;AN=168;BQB=0.86267;DP=2857;DP4=1496,1266,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00175009;MQB=3.76245e-10;MQSB=0.521708;RPB=0.958974;SGB=74.3269;VDB=0.32022;EFF=SPLICE_SITE_DONOR(HIGH||||508|LOC_Os01g31350|protein_coding|CODING|LOC_Os01g31350.1|1|1),INTRON(MODIFIER||||508|LOC_Os01g31350|protein_coding|CODING|LOC_Os01g31350.1|1|1);LOF=(LOC_Os01g31350|LOC_Os01g31350|1|1.00) FN2609-S.SNP.1:17159895 chr01:017159895 0 W/17159895-17159895 FN2609-S SNP G -> T AC=1;AN=198;BQB=0.999816;DP=3282;DP4=2128,987,21,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50504e-17;MQSB=0.807541;RPB=0.709932;SGB=65.676;VDB=0.58216;EFF=UTR_3_PRIME(MODIFIER||13||536|LOC_Os01g31370|protein_coding|CODING|LOC_Os01g31370.1|1|1) FN2582-S.SNP.1:17164237 chr01:017164237 0 W/17164237-17164237 FN2582-S SNP T -> G AC=2;AN=198;BQB=0.969217;DP=4801;DP4=2207,2260,13,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.61383e-12;MQSB=0.938318;RPB=0.744121;SGB=50.1053;VDB=0.750945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.1:17168052 chr01:017168052 0 W/17168052-17168052 FN3968-S SNP G -> A AC=2;AN=168;BQB=0.516562;DP=2045;DP4=1436,519,24,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.38544e-10;MQSB=0.0186198;RPB=0.882889;SGB=93.0718;VDB=0.487615;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q147*|191|LOC_Os01g31390|protein_coding|CODING|LOC_Os01g31390.1|2|1) FN927-S.SNP.1:17170657 chr01:017170657 0 W/17170657-17170657 FN927-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2621-S.SNP.1:17172187 chr01:017172187 0 W/17172187-17172187 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.57653;DP=4931;DP4=2336,2276,20,22;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00121679;MQB=4.67534e-13;MQSB=0.00801431;RPB=0.947458;SGB=-45.1863;VDB=0.671387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.1:17176795 chr01:017176795 0 W/17176795-17176795 FN1346-S Single Base Substitution A-G INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3330-S.SNP.1:17185187 chr01:017185187 0 W/17185187-17185187 FN3330-S SNP C -> A AC=1;AN=184;BQB=0.99287;DP=3512;DP4=1479,1859,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00199317;MQB=8.6702e-09;MQSB=5.97117e-05;RPB=0.979194;SGB=89.4385;VDB=0.261151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A692D|914|LOC_Os01g31420|protein_coding|CODING|LOC_Os01g31420.1|7|1) FN3829-S.SNP.1:17187491 chr01:017187491 0 W/17187491-17187491 FN3829-S SNP T -> C AC=2;AN=190;BQB=0.994271;DP=2967;DP4=1296,1574,14,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.81754e-19;MQSB=0.987238;RPB=0.648741;SGB=110.732;VDB=0.506415;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E646|835|LOC_Os01g31430|protein_coding|CODING|LOC_Os01g31430.1|7|1) FN2497.SNP.1:17195783 chr01:017195783 0 W/17195783-17195783 FN2497 SNP A -> G AC=1;AN=200;BQB=0.436655;DP=4681;DP4=2138,2271,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.20838e-06;MQSB=0.900573;RPB=0.868424;SGB=35.8441;VDB=0.628185;EFF=START_GAINED(LOW||||157|LOC_Os01g31450|protein_coding|CODING|LOC_Os01g31450.1|1|1),UTR_5_PRIME(MODIFIER||1257||157|LOC_Os01g31450|protein_coding|CODING|LOC_Os01g31450.1|1|1) FN3864-S.SNP.1:17201487 chr01:017201487 0 W/17201487-17201487 FN3864-S SNP G -> C AC=2;AN=158;BQB=0.870069;DP=2564;DP4=1131,1310,7,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.71722e-18;MQSB=0.536612;RPB=0.464406;SGB=130.087;VDB=0.908114;EFF=INTRON(MODIFIER||||758|LOC_Os01g31460|protein_coding|CODING|LOC_Os01g31460.1|3|1) FN458-S.SNP.1:17205209 chr01:017205209 0 W/17205209-17205209 FN458-S Single Base Substitution T-C INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN1368-S.SNP.1:17209767 chr01:017209767 0 W/17209767-17209767 FN1368-S Single Base Substitution C-T INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN748-S.SNP.1:17213572 chr01:017213572 0 W/17213572-17213572 FN748-S Single Base Substitution T-C INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3484-S.SNP.1:17219053 chr01:017219053 0 W/17219053-17219053 FN3484-S SNP T -> C AC=1;AN=184;BQB=0.927044;DP=2917;DP4=1246,1545,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84947e-11;MQSB=0.999397;RPB=0.986613;SGB=93.9603;VDB=0.794986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.1:17220971 chr01:017220971 0 W/17220971-17220971 FN2105-S SNP C -> A AC=2;AN=168;BQB=0.446124;DP=3294;DP4=1519,1714,22,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.76021e-20;MQSB=0.996389;RPB=0.990627;SGB=-269.141;VDB=0.997801;EFF=INTERGENIC(MODIFIER||||||||||1) FN817-S.SNP.1:17222742 chr01:017222742 0 W/17222742-17222742 FN817-S Single Base Substitution C-T INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN2593-S.SNP.1:17230376 chr01:017230376 0 W/17230376-17230376 FN2593-S SNP G -> C AC=1;AN=198;BQB=0.759532;DP=4121;DP4=2261,1630,19,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.64782e-17;MQSB=0.211726;RPB=0.814306;SGB=101.266;VDB=0.0370426;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.1:17241204 chr01:017241204 0 W/17241204-17241204 FN-154 Single Base Substitution T-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN-265.SNP.1:17244528 chr01:017244528 0 W/17244528-17244528 FN-265 Single Base Substitution C-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3393-S.SNP.1:17248203 chr01:017248203 0 W/17248203-17248203 FN3393-S SNP G -> A AC=2;AN=184;BQB=0.991955;DP=3328;DP4=1789,1416,23,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.66874e-18;MQSB=0.724628;RPB=0.907418;SGB=99.14;VDB=0.133445;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.1:17253620 chr01:017253620 0 W/17253620-17253620 FN-175 Single Base Substitution C-T INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3546-S.SNP.1:17258034 chr01:017258034 0 W/17258034-17258034 FN3546-S SNP C -> A AC=1;AN=188;BQB=0.998959;DP=2760;DP4=1348,1359,6,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.91114e-05;MQSB=0.989057;RPB=0.393739;SGB=26.2637;VDB=0.329396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L309M|406|LOC_Os01g31550|protein_coding|CODING|LOC_Os01g31550.1|1|1) FN-236.SNP.1:17259594 chr01:017259594 0 W/17259594-17259594 FN-236 Single Base Substitution C-T INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3831-S.SNP.1:17260619 chr01:017260619 0 W/17260619-17260619 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.856813;DP=3183;DP4=1043,2019,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80633e-11;MQSB=0.955986;RPB=0.562469;SGB=64.5316;VDB=0.186131;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G50S|96|LOC_Os01g31560|protein_coding|CODING|LOC_Os01g31560.1|1|1) FN2651-S.SNP.1:17261747 chr01:017261747 0 W/17261747-17261747 FN2651-S SNP G -> T AC=1;AN=200;BQB=0.986009;DP=4680;DP4=2050,2306,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45293e-10;MQSB=0.990442;RPB=0.938142;SGB=6.27959;VDB=0.318781;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:17267463 chr01:017267463 0 W/17267463-17267463 FN-170 Single Base Substitution A-T INTRON HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.1:17267471 chr01:017267471 0 W/17267471-17267471 FN-170 Single Base Substitution A-C INTRON HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-60.SNP.1:17267633 chr01:017267633 0 W/17267633-17267633 FN-60 Single Base Substitution A-G INTRON HOMO SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN2254-S.SNP.1:17281031 chr01:017281031 0 W/17281031-17281031 FN2254-S SNP T -> A AC=1;AN=190;BQB=0.957498;DP=5584;DP4=2610,2514,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.7263e-11;MQSB=0.667337;RPB=0.0705545;SGB=76.4186;VDB=0.480018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.1:17283634 chr01:017283634 0 W/17283634-17283634 FN2297 SNP G -> T AC=2;AN=192;BQB=0.463717;DP=5076;DP4=2144,2649,20,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000197006;MQB=2.39283e-24;MQSB=0.402462;RPB=0.2419;SGB=44.8992;VDB=0.432281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.1:17287297 chr01:017287297 0 W/17287297-17287297 FN2709-S SNP G -> A AC=2;AN=200;BQB=0.133953;DP=4465;DP4=1802,2376,8,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.62944e-10;MQSB=0.5284;RPB=0.804544;SGB=83.5316;VDB=0.0740306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.1:17287349 chr01:017287349 0 W/17287349-17287349 FN1173-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g31590 transposon protein, putative, unclassified, expressed SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1625-S.SNP.1:17287349 chr01:017287349 0 W/17287349-17287349 FN1625-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g31590 transposon protein, putative, unclassified, expressed SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:17287349 chr01:017287349 0 W/17287349-17287349 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.494163;DP=1161;DP4=218,889,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00103987;MQSB=0.76335;RPB=0.715376;SGB=14.7255;VDB=0.582309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S13L|91|LOC_Os01g31590|protein_coding|CODING|LOC_Os01g31590.1|1|1) FN2403.SNP.1:17290453 chr01:017290453 0 W/17290453-17290453 FN2403 SNP T -> A AC=1;AN=200;BQB=0.817191;DP=3519;DP4=1838,1281,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09955e-06;MQSB=0.243367;RPB=0.989601;SGB=-14.9257;VDB=0.797064;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.1:17296733 chr01:017296733 0 W/17296733-17296733 FN527-S Single Base Substitution A-G INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN527-S.SNP.1:17296734 chr01:017296734 0 W/17296734-17296734 FN527-S Single Base Substitution C-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2702-S.SNP.1:17300450 chr01:017300450 0 W/17300450-17300450 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.991145;DP=5266;DP4=2580,2457,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.84928e-10;MQSB=0.874891;RPB=0.99742;SGB=11.0951;VDB=0.00309336;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.1:17305586 chr01:017305586 0 W/17305586-17305586 FN1203-S Single Base Substitution C-G INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN591-S.SNP.1:17313969 chr01:017313969 0 W/17313969-17313969 FN591-S Single Base Substitution G-A INTRON HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN829-S.SNP.1:17315952 chr01:017315952 0 W/17315952-17315952 FN829-S Single Base Substitution A-G INTRON HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1572-S.SNP.1:17317010 chr01:017317010 0 W/17317010-17317010 FN1572-S Single Base Substitution C-G INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1133-S.SNP.1:17317054 chr01:017317054 0 W/17317054-17317054 FN1133-S Single Base Substitution C-T INTRON HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. W246-5-1.SNP.1:17317570 chr01:017317570 0 W/17317570-17317570 W246-5-1 Single Base Substitution G-A INTRON HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN677-S.SNP.1:17320973 chr01:017320973 0 W/17320973-17320973 FN677-S Single Base Substitution G-C INTRON HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3720-S.SNP.1:17327198 chr01:017327198 0 W/17327198-17327198 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.752503;DP=2319;DP4=1239,978,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000232158;MQSB=0.968775;RPB=0.818898;SGB=25.439;VDB=0.775568;EFF=INTRON(MODIFIER||||158|LOC_Os01g31650|protein_coding|CODING|LOC_Os01g31650.1|1|1) FN3994-S.SNP.1:17332330 chr01:017332330 0 W/17332330-17332330 FN3994-S SNP C -> T AC=1;AN=168;BQB=0.875154;DP=1735;DP4=871,778,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0207493;MQB=0.123001;MQSB=1.97251e-07;RPB=0.74173;SGB=38.8805;VDB=0.448353;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S161|792|LOC_Os01g31660|protein_coding|CODING|LOC_Os01g31660.1|1|1) FN1579-S.SNP.1:17335812 chr01:017335812 0 W/17335812-17335812 FN1579-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2583-S.SNP.1:17336894 chr01:017336894 0 W/17336894-17336894 FN2583-S SNP C -> A AC=1;AN=200;BQB=0.882406;DP=4959;DP4=2535,2177,9,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=7.12084e-06;MQSB=0.0151503;RPB=0.919959;SGB=68.0801;VDB=0.998334;EFF=INTRON(MODIFIER||||420|LOC_Os01g31670|protein_coding|CODING|LOC_Os01g31670.1|4|1) FN3056-S.SNP.1:17338895 chr01:017338895 0 W/17338895-17338895 FN3056-S SNP A -> T AC=2;AN=184;BQB=0.79777;DP=2837;DP4=1316,1356,9,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.6134e-10;MQSB=0.682593;RPB=0.829473;SGB=45.9712;VDB=0.704342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3822-S.SNP.1:17342858 chr01:017342858 0 W/17342858-17342858 FN3822-S SNP T -> A AC=2;AN=190;BQB=0.654677;DP=2656;DP4=1376,1153,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.25332e-12;MQSB=0.99367;RPB=0.766687;SGB=54.3062;VDB=0.463331;EFF=INTRON(MODIFIER||||359|LOC_Os01g31680|protein_coding|CODING|LOC_Os01g31680.1|2|1),INTRON(MODIFIER||||349|LOC_Os01g31680|protein_coding|CODING|LOC_Os01g31680.2|2|1) FN1243-S.SNP.1:17342919 chr01:017342919 0 W/17342919-17342919 FN1243-S Single Base Substitution A-C INTRON HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1079-S.SNP.1:17343807 chr01:017343807 0 W/17343807-17343807 FN1079-S Single Base Substitution A-C INTRON HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN2314.SNP.1:17347012 chr01:017347012 0 W/17347012-17347012 FN2314 SNP T -> C AC=1;AN=192;BQB=0.343448;DP=5221;DP4=2475,2503,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.35696e-09;MQSB=0.862947;RPB=0.849557;SGB=72.0322;VDB=0.188948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.1:17358659 chr01:017358659 0 W/17358659-17358659 FN2489 SNP T -> C AC=1;AN=200;BQB=0.647479;DP=4039;DP4=1727,1834,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000247586;MQB=5.19149e-10;MQSB=0.1946;RPB=0.916287;SGB=61.9006;VDB=0.353865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.1:17359372 chr01:017359372 0 W/17359372-17359372 FN1301-S Single Base Substitution A-G INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4147-S.SNP.1:17362303 chr01:017362303 0 W/17362303-17362303 FN4147-S SNP C -> T AC=1;AN=170;BQB=0.920548;DP=2532;DP4=1205,1251,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000789889;MQB=6.78804e-06;MQSB=0.843779;RPB=0.452063;SGB=31.4354;VDB=0.813442;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T446|545|LOC_Os01g31714|protein_coding|CODING|LOC_Os01g31714.1|7|1) FN2134-S.SNP.1:17362919 chr01:017362919 0 W/17362919-17362919 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.803226;DP=3412;DP4=1548,1815,15,18;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000293083;MQB=5.30608e-13;MQSB=0.185656;RPB=0.703794;SGB=-46.3351;VDB=0.137472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.1:17364457 chr01:017364457 0 W/17364457-17364457 FN1527-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1527-S.SNP.1:17364458 chr01:017364458 0 W/17364458-17364458 FN1527-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os01g31730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2281.SNP.1:17371129 chr01:017371129 0 W/17371129-17371129 FN2281 SNP G -> A AC=1;AN=192;BQB=0.79318;DP=4709;DP4=2455,1910,10,18;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.0651943;MQB=0.991463;MQSB=0;RPB=0.596355;SGB=24.5626;VDB=0.44026;EFF=INTRON(MODIFIER||||91|LOC_Os01g31740|protein_coding|CODING|LOC_Os01g31740.1|1|1) FN3632-S.SNP.1:17374522 chr01:017374522 0 W/17374522-17374522 FN3632-S SNP T -> A AC=1;AN=190;BQB=0.998264;DP=2302;DP4=943,1248,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55599e-06;MQSB=0.990757;RPB=0.437016;SGB=44.5415;VDB=0.832737;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.1:17375625 chr01:017375625 0 W/17375625-17375625 FN3493-S SNP A -> G AC=1;AN=184;BQB=0.890717;DP=2634;DP4=1343,1182,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44176e-09;MQSB=0.999978;RPB=0.94296;SGB=39.2697;VDB=0.0422872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.1:17377836 chr01:017377836 0 W/17377836-17377836 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.282512;DP=3840;DP4=1830,1955,11,16;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0296875;MQB=0.00577145;MQSB=2.77457e-43;RPB=0.827743;SGB=-168.619;VDB=0.411998;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V38|717|LOC_Os01g31750|protein_coding|CODING|LOC_Os01g31750.1|2|1) FN2470.SNP.1:17386229 chr01:017386229 0 W/17386229-17386229 FN2470 SNP G -> A AC=2;AN=200;BQB=0.860065;DP=4039;DP4=2369,1125,23,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56413e-14;MQSB=0.705193;RPB=0.999449;SGB=41.5933;VDB=0.709586;EFF=INTRON(MODIFIER||||446|LOC_Os01g31760|protein_coding|CODING|LOC_Os01g31760.1|1|1) FN1384-S.SNP.1:17399669 chr01:017399669 0 W/17399669-17399669 FN1384-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g31770 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2322.SNP.1:17402691 chr01:017402691 0 W/17402691-17402691 FN2322 SNP G -> T AC=1;AN=192;BQB=0.60517;DP=4811;DP4=2242,2265,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39552e-09;MQSB=0.857124;RPB=0.988644;SGB=10.4835;VDB=0.747217;EFF=INTRON(MODIFIER||||392|LOC_Os01g31770|protein_coding|CODING|LOC_Os01g31770.1|7|1),INTRON(MODIFIER||||402|LOC_Os01g31770|protein_coding|CODING|LOC_Os01g31770.2|7|1) FN3393-S.SNP.1:17408875 chr01:017408875 0 W/17408875-17408875 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.5958;DP=2876;DP4=1385,1393,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000347705;MQB=0.000112048;MQSB=0.00117496;RPB=0.653765;SGB=53.2642;VDB=0.78464;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.1:17408895 chr01:017408895 0 W/17408895-17408895 FN443-S Single Base Substitution G-T INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3365-S.SNP.1:17410373 chr01:017410373 0 W/17410373-17410373 FN3365-S SNP C -> T AC=1;AN=184;BQB=0.806348;DP=3349;DP4=1746,1515,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.47298e-08;MQSB=0.975845;RPB=0.545249;SGB=25.7969;VDB=0.305955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:17412802 chr01:017412802 0 W/17412802-17412802 FN3360-S SNP C -> A AC=1;AN=184;BQB=0.986267;DP=3086;DP4=1535,1361,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5185e-12;MQSB=0.871482;RPB=0.470987;SGB=60.4004;VDB=0.0159676;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.1:17414983 chr01:017414983 0 W/17414983-17414983 FN909-S Single Base Substitution T-G INTERGENIC HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2128-S.SNP.1:17433812 chr01:017433812 0 W/17433812-17433812 FN2128-S SNP G -> T AC=1;AN=168;BQB=0.370233;DP=2168;DP4=1515,617,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.36559e-08;MQSB=0.636578;RPB=0.888352;SGB=8.48315;VDB=0.374321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.1:17450265 chr01:017450265 0 W/17450265-17450265 FN1405-S Single Base Substitution A-C INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1135-S.SNP.1:17464025 chr01:017464025 0 W/17464025-17464025 FN1135-S Single Base Substitution C-A INTRON HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3998-S.SNP.1:17464181 chr01:017464181 0 W/17464181-17464181 FN3998-S SNP C -> A AC=2;AN=168;BQB=0.982587;DP=2698;DP4=1390,1176,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.55783e-14;MQSB=0.794791;RPB=0.798906;SGB=72.4869;VDB=0.637545;EFF=INTRON(MODIFIER||||550|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.1|1|1),INTRON(MODIFIER||||390|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.2|1|1),INTRON(MODIFIER||||390|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.3|2|1),INTRON(MODIFIER||||353|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.4|1|1),INTRON(MODIFIER||||251|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.5|1|1),INTRON(MODIFIER||||251|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.6|1|1),INTRON(MODIFIER||||251|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.7|1|1),INTRON(MODIFIER||||210|LOC_Os01g31870|protein_coding|CODING|LOC_Os01g31870.8|1|1) FN-150.SNP.1:17468128 chr01:017468128 0 W/17468128-17468128 FN-150 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g31880 retrotransposon protein, putative, Ty1-copia subclass SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN1380-S.SNP.1:17469178 chr01:017469178 0 W/17469178-17469178 FN1380-S Single Base Substitution C-T INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2188-S.SNP.1:17470301 chr01:017470301 0 W/17470301-17470301 FN2188-S SNP A -> T AC=1;AN=190;BQB=0.958015;DP=4557;DP4=1699,2509,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.09014e-18;MQSB=0.862946;RPB=0.00907502;SGB=103.624;VDB=0.575781;EFF=UTR_3_PRIME(MODIFIER||139||203|LOC_Os01g31890|protein_coding|CODING|LOC_Os01g31890.1|1|1) FN3713-S.SNP.1:17471880 chr01:017471880 0 W/17471880-17471880 FN3713-S SNP G -> T AC=1;AN=190;BQB=0.993864;DP=1817;DP4=670,1075,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94817e-05;MQSB=0.593976;RPB=0.997731;SGB=44.5415;VDB=0.992982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.1:17478201 chr01:017478201 0 W/17478201-17478201 FN1372-S Single Base Substitution A-G INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN4311-S.SNP.1:17481893 chr01:017481893 0 W/17481893-17481893 FN4311-S SNP G -> A AC=2;AN=170;BQB=0.974744;DP=2988;DP4=1647,1247,18,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15779e-12;MQSB=0.990217;RPB=0.964571;SGB=49.1957;VDB=0.953676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.1:17483574 chr01:017483574 0 W/17483574-17483574 FN3558-S SNP A -> T AC=2;AN=188;BQB=0.997335;DP=2984;DP4=1362,1522,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.17627e-11;MQSB=0.973376;RPB=0.814325;SGB=85.3253;VDB=0.610267;EFF=INTRON(MODIFIER||||236|LOC_Os01g31920|protein_coding|CODING|LOC_Os01g31920.1|1|1) FN4311-S.SNP.1:17484120 chr01:017484120 0 W/17484120-17484120 FN4311-S SNP A -> T AC=2;AN=170;BQB=0.811314;DP=2562;DP4=1305,1142,14,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.31818e-13;MQSB=0.942094;RPB=0.868869;SGB=96.7413;VDB=0.4648;EFF=INTRON(MODIFIER||||236|LOC_Os01g31920|protein_coding|CODING|LOC_Os01g31920.1|2|1) FN2534-S.SNP.1:17501803 chr01:017501803 0 W/17501803-17501803 FN2534-S SNP T -> C AC=1;AN=198;BQB=0.839993;DP=4539;DP4=2333,1979,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.27163e-10;MQSB=0.751301;RPB=0.91992;SGB=54.5295;VDB=0.184493;EFF=INTRON(MODIFIER||||91|LOC_Os01g31970|protein_coding|CODING|LOC_Os01g31970.1|2|1) FN776-S.SNP.1:17513555 chr01:017513555 0 W/17513555-17513555 FN776-S Single Base Substitution A-G INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3599-S.SNP.1:17514854 chr01:017514854 0 W/17514854-17514854 FN3599-S SNP G -> C AC=2;AN=188;BQB=0.73151;DP=2948;DP4=1512,1350,9,15;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=0.00310789;MQSB=1.18619e-08;RPB=0.361882;SGB=103.498;VDB=0.121566;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:17516641 chr01:017516641 0 W/17516641-17516641 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.976264;DP=4877;DP4=2184,2388,16,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00164035;MQB=1.21969e-09;MQSB=0.982327;RPB=0.99649;SGB=94.3471;VDB=0.868947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.1:17520335 chr01:017520335 0 W/17520335-17520335 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.902135;DP=3735;DP4=1378,2237,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68059e-05;MQSB=0.961132;RPB=0.997507;SGB=39.699;VDB=0.342083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.1:17520922 chr01:017520922 0 W/17520922-17520922 FN3479-S SNP C -> A AC=1;AN=184;BQB=0.541324;DP=3383;DP4=1482,1730,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.26258e-06;MQSB=0.504054;RPB=0.0207765;SGB=66.8296;VDB=0.600127;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G115|369|LOC_Os01g32000|protein_coding|CODING|LOC_Os01g32000.1|1|1) FN3516-S.SNP.1:17525590 chr01:017525590 0 W/17525590-17525590 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.977277;DP=2853;DP4=1291,1488,1,9;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.230284;MQB=0.085971;MQSB=1.08333e-05;RPB=0.653533;SGB=39.8925;VDB=0.594064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R982H|1275|LOC_Os01g32010|protein_coding|CODING|LOC_Os01g32010.1|5|1) FN3355-S.SNP.1:17526113 chr01:017526113 0 W/17526113-17526113 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.956194;DP=2859;DP4=1471,1301,17,11;HOB=0.0215028;ICB=0.494625;MQ=21;MQ0F=0.216859;MQB=0.49441;MQSB=1.32155e-38;RPB=0.244066;SGB=56.0583;VDB=0.702629;EFF=INTRON(MODIFIER||||1275|LOC_Os01g32010|protein_coding|CODING|LOC_Os01g32010.1|4|1) FN4150-S.SNP.1:17528375 chr01:017528375 0 W/17528375-17528375 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.95151;DP=2889;DP4=1464,1343,10,13;HOB=6.92042e-05;ICB=0.000139222;MQ=13;MQ0F=0.499135;MQB=0.0127158;MQSB=0.0127712;RPB=0.063454;SGB=69.3045;VDB=0.0102437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E452K|1275|LOC_Os01g32010|protein_coding|CODING|LOC_Os01g32010.1|2|1) FN959-S.SNP.1:17529841 chr01:017529841 0 W/17529841-17529841 FN959-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g32010 retrotransposon protein, putative, unclassified, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2386.SNP.1:17532252 chr01:017532252 0 W/17532252-17532252 FN2386 SNP T -> A AC=1;AN=192;BQB=0.53609;DP=4382;DP4=1896,2191,4,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.13506e-11;MQSB=0.843542;RPB=0.999181;SGB=64.7304;VDB=0.912553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L159H|537|LOC_Os01g32020|protein_coding|CODING|LOC_Os01g32020.1|1|1) FN1024-S.SNP.1:17538979 chr01:017538979 0 W/17538979-17538979 FN1024-S Single Base Substitution T-C INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2547-S.SNP.1:17539141 chr01:017539141 0 W/17539141-17539141 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.974087;DP=4442;DP4=2022,2231,8,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.74677e-05;MQSB=0.896216;RPB=0.567689;SGB=22.1736;VDB=0.648333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.1:17544635 chr01:017544635 0 W/17544635-17544635 FN2309 SNP T -> A AC=1;AN=192;BQB=0.837707;DP=4293;DP4=2149,1665,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.65202e-14;MQSB=0.999185;RPB=0.647819;SGB=75.4235;VDB=0.193383;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.1:17558010 chr01:017558010 0 W/17558010-17558010 FN2379 SNP C -> T AC=1;AN=192;BQB=0.20111;DP=4147;DP4=2324,1429,16,19;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0238727;MQB=3.0272e-05;MQSB=0.0321103;RPB=0.897213;SGB=-83.1643;VDB=0.480218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.1:17562005 chr01:017562005 0 W/17562005-17562005 FN1339-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g32080 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN626-S.SNP.1:17568892 chr01:017568892 0 W/17568892-17568892 FN626-S Single Base Substitution C-T INTERGENIC HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2281.SNP.1:17576455 chr01:017576455 0 W/17576455-17576455 FN2281 SNP C -> G AC=1;AN=192;BQB=0.0329781;DP=6669;DP4=3420,2585,298,19;HOB=5.42535e-05;ICB=0.000109072;MQ=25;MQ0F=0.17049;MQB=0;MQSB=0;RPB=9.89257e-08;SGB=-4455.61;VDB=5.18376e-05;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D805H|834|LOC_Os01g32110|protein_coding|CODING|LOC_Os01g32110.1|3|1) FN1313-S.SNP.1:17578356 chr01:017578356 0 W/17578356-17578356 FN1313-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2364.SNP.1:17587775 chr01:017587775 0 W/17587775-17587775 FN2364 SNP T -> C AC=1;AN=192;BQB=0.764645;DP=5288;DP4=2445,2561,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.40446e-11;MQSB=0.993112;RPB=0.390909;SGB=68.2948;VDB=0.527061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.1:17592447 chr01:017592447 0 W/17592447-17592447 FN2789-S SNP A -> T AC=1;AN=198;BQB=0.959108;DP=4128;DP4=2057,1892,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21183e-10;MQSB=0.998322;RPB=0.993559;SGB=67.9293;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.1:17595017 chr01:017595017 0 W/17595017-17595017 FN-52 Single Base Substitution T-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2553-S.SNP.1:17600549 chr01:017600549 0 W/17600549-17600549 FN2553-S SNP C -> A AC=1;AN=198;BQB=0.890093;DP=4037;DP4=1962,1819,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.10516e-12;MQSB=0.235203;RPB=0.157658;SGB=37.1297;VDB=0.21378;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S4*|56|LOC_Os01g32160|protein_coding|CODING|LOC_Os01g32160.1|1|1);LOF=(LOC_Os01g32160|LOC_Os01g32160|1|1.00);NMD=(LOC_Os01g32160|LOC_Os01g32160|1|1.00) FN1310-S.SNP.1:17603730 chr01:017603730 0 W/17603730-17603730 FN1310-S Single Base Substitution G-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2467.SNP.1:17610311 chr01:017610311 0 W/17610311-17610311 FN2467 SNP A -> G AC=1;AN=200;BQB=0.267595;DP=4880;DP4=2224,2414,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.80261e-07;MQSB=0.832673;RPB=0.281228;SGB=16.4591;VDB=0.585872;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.1:17610435 chr01:017610435 0 W/17610435-17610435 FN1559-S Single Base Substitution G-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1559-S.SNP.1:17610446 chr01:017610446 0 W/17610446-17610446 FN1559-S Single Base Substitution G-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1521-S.SNP.1:17620432 chr01:017620432 0 W/17620432-17620432 FN1521-S Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os01g32184 tetratricopeptide repeat protein 5, putative, expressed SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN457-S.SNP.1:17621492 chr01:017621492 0 W/17621492-17621492 FN457-S Single Base Substitution T-A INTRON HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN-226.SNP.1:17624485 chr01:017624485 0 W/17624485-17624485 FN-226 Single Base Substitution C-T INTRON HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2230-S.SNP.1:17627699 chr01:017627699 0 W/17627699-17627699 FN2230-S SNP G -> C AC=1;AN=190;BQB=0.687502;DP=3796;DP4=1868,1484,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1173e-09;MQSB=0.887251;RPB=0.842261;SGB=71.8647;VDB=0.473207;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.1:17629510 chr01:017629510 0 W/17629510-17629510 FN2626-S SNP A -> G AC=2;AN=200;BQB=0.158611;DP=5135;DP4=2482,2449,7,6;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.38261e-08;MQSB=0.835844;RPB=0.978404;SGB=19.0642;VDB=0.481142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.1:17634181 chr01:017634181 0 W/17634181-17634181 FN1470-S Single Base Substitution G-A INTRON HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3762-S.SNP.1:17646226 chr01:017646226 0 W/17646226-17646226 FN3762-S SNP C -> T AC=1;AN=190;BQB=0.962626;DP=2682;DP4=1657,938,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0164057;MQB=0.579391;MQSB=1.11852e-09;RPB=0.455785;SGB=53.6492;VDB=0.0907686;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.1:17658768 chr01:017658768 0 W/17658768-17658768 FN-216 Single Base Substitution T-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2597-S.SNP.1:17665097 chr01:017665097 0 W/17665097-17665097 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.000761134;DP=4354;DP4=2182,1737,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.1722e-12;MQSB=0.987096;RPB=0.375737;SGB=25.3006;VDB=0.262654;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.1:17670406 chr01:017670406 0 W/17670406-17670406 FN4122-S SNP C -> T AC=2;AN=182;BQB=0.991842;DP=2723;DP4=1253,1364,10,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00110173;MQB=3.92115e-14;MQSB=0.415949;RPB=0.444104;SGB=120.796;VDB=0.108375;EFF=INTRON(MODIFIER||||1253|LOC_Os01g32250|protein_coding|CODING|LOC_Os01g32250.1|5|1) FN804-S.SNP.1:17673622 chr01:017673622 0 W/17673622-17673622 FN804-S Single Base Substitution A-T INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1061-S.SNP.1:17673897 chr01:017673897 0 W/17673897-17673897 FN1061-S Single Base Substitution A-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. W466-5-1.SNP.1:17691931 chr01:017691931 0 W/17691931-17691931 W466-5-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g32270 hypothetical protein SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2608-S.SNP.1:17696677 chr01:017696677 0 W/17696677-17696677 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.647881;DP=4239;DP4=2082,1849,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.43905e-05;MQSB=0.570054;RPB=0.879342;SGB=29.3637;VDB=0.0398022;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.1:17697160 chr01:017697160 0 W/17697160-17697160 FN590-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN3453-S.SNP.1:17706203 chr01:017706203 0 W/17706203-17706203 FN3453-S SNP A -> G AC=1;AN=184;BQB=0.999971;DP=2490;DP4=1106,1307,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9252e-10;MQSB=0.885965;RPB=0.484747;SGB=30.8405;VDB=0.18785;EFF=UTR_3_PRIME(MODIFIER||310||291|LOC_Os01g32280|protein_coding|CODING|LOC_Os01g32280.1|4|1) FN1234-S.SNP.1:17707742 chr01:017707742 0 W/17707742-17707742 FN1234-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN955-S.SNP.1:17721288 chr01:017721288 0 W/17721288-17721288 FN955-S Single Base Substitution C-A INTERGENIC HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN1509-S.SNP.1:17726438 chr01:017726438 0 W/17726438-17726438 FN1509-S Single Base Substitution T-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1509-S.SNP.1:17726440 chr01:017726440 0 W/17726440-17726440 FN1509-S Single Base Substitution T-C INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1277-S.SNP.1:17727329 chr01:017727329 0 W/17727329-17727329 FN1277-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2360.SNP.1:17727682 chr01:017727682 0 W/17727682-17727682 FN2360 SNP C -> T AC=1;AN=192;BQB=0.555276;DP=4810;DP4=2083,2340,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.64614e-12;MQSB=0.661897;RPB=0.992594;SGB=-7.9965;VDB=0.995932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.1:17737015 chr01:017737015 0 W/17737015-17737015 FN1394-S Single Base Substitution T-C INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1184-S.SNP.1:17740902 chr01:017740902 0 W/17740902-17740902 FN1184-S Single Base Substitution A-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3543-S.SNP.1:17744848 chr01:017744848 0 W/17744848-17744848 FN3543-S SNP G -> T AC=1;AN=188;BQB=0.655256;DP=3259;DP4=1677,1474,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.81728e-06;MQSB=0.98309;RPB=0.817298;SGB=62.6088;VDB=0.0940809;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.1:17744848 chr01:017744848 0 W/17744848-17744848 FN4106-S SNP G -> T AC=1;AN=182;BQB=0.982011;DP=3200;DP4=1514,1575,15,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.58156e-13;MQSB=0.946538;RPB=0.708785;SGB=70.7363;VDB=0.0503942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.1:17747619 chr01:017747619 0 W/17747619-17747619 FN2742-S SNP T -> C AC=1;AN=200;BQB=0.998902;DP=4890;DP4=2401,2157,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.78862e-13;MQSB=0.999094;RPB=0.555288;SGB=47.7211;VDB=0.0998001;EFF=INTRON(MODIFIER||||314|LOC_Os01g32350|protein_coding|CODING|LOC_Os01g32350.1|1|1),INTRON(MODIFIER||||314|LOC_Os01g32350|protein_coding|CODING|LOC_Os01g32350.2|1|1),INTRON(MODIFIER||||209|LOC_Os01g32350|protein_coding|CODING|LOC_Os01g32350.3|1|1) FN1215-S.SNP.1:17751947 chr01:017751947 0 W/17751947-17751947 FN1215-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN811-S.SNP.1:17752437 chr01:017752437 0 W/17752437-17752437 FN811-S Single Base Substitution C-T INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2305.SNP.1:17753847 chr01:017753847 0 W/17753847-17753847 FN2305 SNP A -> G AC=1;AN=192;BQB=0.924253;DP=3883;DP4=1203,2443,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.06817e-07;MQSB=0.999966;RPB=0.821923;SGB=62.9035;VDB=0.0336584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.1:17762618 chr01:017762618 0 W/17762618-17762618 FN2109-S SNP C -> A AC=2;AN=168;BQB=0.643995;DP=3565;DP4=1905,1599,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.18193e-16;MQSB=0.999694;RPB=0.974894;SGB=-131.462;VDB=0.900981;EFF=INTRON(MODIFIER||||516|LOC_Os01g32364|protein_coding|CODING|LOC_Os01g32364.1|6|1) FN3913-S.SNP.1:17766329 chr01:017766329 0 W/17766329-17766329 FN3913-S SNP A -> T AC=1;AN=158;BQB=0.610424;DP=2210;DP4=1006,1053,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.02474e-06;MQSB=0.948208;RPB=0.74099;SGB=64.5449;VDB=0.951336;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.1:17766350 chr01:017766350 0 W/17766350-17766350 FN-200 Single Base Substitution T-C INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3446-S.SNP.1:17769833 chr01:017769833 0 W/17769833-17769833 FN3446-S SNP T -> C AC=2;AN=184;BQB=0.821984;DP=2698;DP4=1223,1352,7,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.84469e-13;MQSB=0.945141;RPB=0.88818;SGB=84.9167;VDB=0.932335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.1:17773409 chr01:017773409 0 W/17773409-17773409 FN2706-S SNP A -> T AC=1;AN=200;BQB=0.409573;DP=4412;DP4=2122,2079,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24413e-14;MQSB=0.999575;RPB=0.722271;SGB=69.1109;VDB=0.842496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.1:17773410 chr01:017773410 0 W/17773410-17773410 FN2706-S SNP C -> A AC=1;AN=200;BQB=0.688391;DP=4405;DP4=2141,2058,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74484e-15;MQSB=0.995914;RPB=0.731208;SGB=45.1159;VDB=0.77325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.1:17775939 chr01:017775939 0 W/17775939-17775939 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.711277;DP=2499;DP4=1208,1210,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00040016;MQB=1.87167e-07;MQSB=0.980281;RPB=0.825405;SGB=68.9144;VDB=0.415401;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q193|531|LOC_Os01g32400|protein_coding|CODING|LOC_Os01g32400.1|1|1) FN2455.SNP.1:17779466 chr01:017779466 0 W/17779466-17779466 FN2455 SNP A -> T AC=1;AN=200;BQB=0.911659;DP=2292;DP4=576,1447,3,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0017452;MQB=3.30079e-05;MQSB=0;RPB=0.678647;SGB=45.0543;VDB=0.134027;EFF=INTRON(MODIFIER||||198|LOC_Os01g32410|protein_coding|CODING|LOC_Os01g32410.1|1|1) FN2455.SNP.1:17779467 chr01:017779467 0 W/17779467-17779467 FN2455 SNP A -> T AC=1;AN=200;BQB=0.0246793;DP=2274;DP4=567,1349,4,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000879507;MQB=0.000162576;MQSB=0;RPB=0.936187;SGB=-34.9207;VDB=0.301205;EFF=INTRON(MODIFIER||||198|LOC_Os01g32410|protein_coding|CODING|LOC_Os01g32410.1|1|1) FN1738-S.SNP.1:17782756 chr01:017782756 0 W/17782756-17782756 FN1738-S SNP G -> A AC=1;AN=188;BQB=0.253043;DP=1444;DP4=533,871,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.70209e-05;MQSB=0.99959;RPB=0.857518;SGB=28.8977;VDB=0.650903;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.1:17783841 chr01:017783841 0 W/17783841-17783841 FN2399 SNP G -> A AC=1;AN=200;BQB=0.0137478;DP=4086;DP4=1929,1904,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.88906e-06;MQSB=0.624324;RPB=0.890862;SGB=36.6644;VDB=0.316387;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.1:17787185 chr01:017787185 0 W/17787185-17787185 FN-228 Single Base Substitution A-T INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2682-S.SNP.1:17788143 chr01:017788143 0 W/17788143-17788143 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.308688;DP=4617;DP4=2502,1890,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.98853e-09;MQSB=0.99999;RPB=0.734338;SGB=29.4849;VDB=0.75211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.1:17794068 chr01:017794068 0 W/17794068-17794068 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.964448;DP=3459;DP4=1531,1777,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.6595e-06;MQSB=0.955821;RPB=0.171874;SGB=21.6609;VDB=0.0869892;EFF=INTRON(MODIFIER||||55|LOC_Os01g32439|protein_coding|CODING|LOC_Os01g32439.1|1|1) FN3343-S.SNP.1:17794069 chr01:017794069 0 W/17794069-17794069 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.986987;DP=3455;DP4=1545,1795,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96525e-06;MQSB=0.904011;RPB=0.20282;SGB=-2.32838;VDB=0.131446;EFF=INTRON(MODIFIER||||55|LOC_Os01g32439|protein_coding|CODING|LOC_Os01g32439.1|1|1) FN3723-S.SNP.1:17801500 chr01:017801500 0 W/17801500-17801500 FN3723-S SNP T -> G AC=1;AN=190;BQB=0.966107;DP=2533;DP4=1071,1360,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.22879e-06;MQSB=0.965589;RPB=0.75396;SGB=21.8853;VDB=0.702766;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.1:17805376 chr01:017805376 0 W/17805376-17805376 FN1203-S Single Base Substitution C-A INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN584-S.SNP.1:17805603 chr01:017805603 0 W/17805603-17805603 FN584-S Single Base Substitution C-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN748-S.SNP.1:17807503 chr01:017807503 0 W/17807503-17807503 FN748-S Single Base Substitution T-C INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN_769-4-1.SNP.1:17814680 chr01:017814680 0 W/17814680-17814680 FN_769-4-1 Single Base Substitution C-T HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1270-S.SNP.1:17816344 chr01:017816344 0 W/17816344-17816344 FN1270-S Single Base Substitution G-A INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1270-S.SNP.1:17816345 chr01:017816345 0 W/17816345-17816345 FN1270-S Single Base Substitution A-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1742-S.SNP.1:17819327 chr01:017819327 0 W/17819327-17819327 FN1742-S SNP G -> C AC=1;AN=188;BQB=0.0820116;DP=3600;DP4=1077,2461,10,23;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.26532e-12;MQSB=0.807482;RPB=0.72533;SGB=-230.992;VDB=0.361161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.1:17823737 chr01:017823737 0 W/17823737-17823737 FN1424-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g32500 retrotransposon protein, putative, unclassified, expressed SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN-350.SNP.1:17825885 chr01:017825885 0 W/17825885-17825885 FN-350 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN972-S.SNP.1:17831606 chr01:017831606 0 W/17831606-17831606 FN972-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g32510 retrotransposon protein, putative, unclassified, expressed SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. 705-1.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 705-1 Single Base Substitution G-T INTERGENIC Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 705-2 Single Base Substitution G-T INTERGENIC Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-3.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 705-3 Single Base Substitution G-T INTERGENIC Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. 705-6.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 705-6 Single Base Substitution G-T INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. 705-7.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 705-7 Single Base Substitution G-T INTERGENIC Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN-137.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN-137 Single Base Substitution G-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-76.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN-76 Single Base Substitution G-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2118-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN2118-S SNP G -> T AC=2;AN=168;BQB=0.983604;DP=1125;DP4=434,623,8,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.89306e-08;MQSB=0.999183;RPB=0.542054;SGB=32.3876;VDB=0.841004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN3449-S SNP G -> T AC=2;AN=184;BQB=0.801297;DP=3167;DP4=1635,1286,19,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.37705e-19;MQSB=0.996697;RPB=0.838858;SGB=-46.751;VDB=0.685957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN3723-S SNP G -> T AC=2;AN=190;BQB=0.347276;DP=1739;DP4=832,748,6,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4918e-08;MQSB=0.991058;RPB=0.733776;SGB=-11.5603;VDB=0.0903095;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN692-S Single Base Substitution G-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN811-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN811-S Single Base Substitution G-T INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN921-S.SNP.1:17833819 chr01:017833819 0 W/17833819-17833819 FN921-S Single Base Substitution G-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN972-S.SNP.1:17835367 chr01:017835367 0 W/17835367-17835367 FN972-S Single Base Substitution A-C INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1633-S.SNP.1:17840184 chr01:017840184 0 W/17840184-17840184 FN1633-S Single Base Substitution T-G INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN-117.SNP.1:17847249 chr01:017847249 0 W/17847249-17847249 FN-117 Single Base Substitution A-T INTRON HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN4095-S.SNP.1:17852245 chr01:017852245 0 W/17852245-17852245 FN4095-S SNP G -> A AC=1;AN=182;BQB=0.800762;DP=2576;DP4=1191,1324,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.72538e-06;MQSB=0.910099;RPB=0.965085;SGB=28.6061;VDB=0.50116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.1:17855884 chr01:017855884 0 W/17855884-17855884 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.999247;DP=4765;DP4=2499,2000,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1578e-06;MQSB=0.97727;RPB=0.699138;SGB=19.0642;VDB=0.229947;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.1:17856347 chr01:017856347 0 W/17856347-17856347 FN1420-S Single Base Substitution C-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2582-S.SNP.1:17861099 chr01:017861099 0 W/17861099-17861099 FN2582-S SNP T -> A AC=1;AN=198;BQB=0.943121;DP=4084;DP4=1826,2056,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.00407525;MQSB=0.51569;RPB=0.460574;SGB=40.3588;VDB=0.546507;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.1:17864893 chr01:017864893 0 W/17864893-17864893 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.798128;DP=2628;DP4=1486,1038,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000761035;MQB=2.26442e-10;MQSB=0.458341;RPB=0.95203;SGB=64.5316;VDB=0.707276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.1:17869762 chr01:017869762 0 W/17869762-17869762 FN2698-S SNP A -> T AC=1;AN=200;BQB=0.998711;DP=4849;DP4=2446,2144,15,16;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0274283;MQB=0.00442708;MQSB=0.000116741;RPB=0.0336012;SGB=65.9573;VDB=0.0933022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L213I|473|LOC_Os01g32574|protein_coding|CODING|LOC_Os01g32574.1|1|1) FN1215-S.SNP.1:17876189 chr01:017876189 0 W/17876189-17876189 FN1215-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2577-S.SNP.1:17883410 chr01:017883410 0 W/17883410-17883410 FN2577-S SNP T -> A AC=1;AN=198;BQB=0.784391;DP=4434;DP4=2081,1975,18,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00022553;MQB=5.35633e-09;MQSB=0.899209;RPB=0.546368;SGB=-37.0454;VDB=0.588519;EFF=SPLICE_SITE_REGION(LOW||||114|LOC_Os01g32610|protein_coding|CODING|LOC_Os01g32610.1|3|1),INTRON(MODIFIER||||114|LOC_Os01g32610|protein_coding|CODING|LOC_Os01g32610.1|3|1) FN4300-S.SNP.1:17885521 chr01:017885521 0 W/17885521-17885521 FN4300-S SNP C -> A AC=1;AN=170;BQB=0.894389;DP=2637;DP4=1256,1320,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.52513e-08;MQSB=0.996581;RPB=0.672076;SGB=65.6427;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.1:17885919 chr01:017885919 0 W/17885919-17885919 FN980-S Single Base Substitution C-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2597-S.SNP.1:17888095 chr01:017888095 0 W/17888095-17888095 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.972659;DP=4300;DP4=2125,1996,16,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.79098e-14;MQSB=0.957386;RPB=0.873372;SGB=-9.07482;VDB=0.659598;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1396|1592|LOC_Os01g32630|protein_coding|CODING|LOC_Os01g32630.1|5|1) FN784-S.SNP.1:17890413 chr01:017890413 0 W/17890413-17890413 FN784-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g32630 retrotransposon protein, putative, unclassified, expressed SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2531-S.SNP.1:17894348 chr01:017894348 0 W/17894348-17894348 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.819288;DP=3868;DP4=1930,1573,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.14566e-08;MQSB=0.410481;RPB=0.363757;SGB=39.7248;VDB=0.489776;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.1:17894348 chr01:017894348 0 W/17894348-17894348 FN319-S Single Base Substitution T-C INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3540-S.SNP.1:17894348 chr01:017894348 0 W/17894348-17894348 FN3540-S SNP T -> C AC=2;AN=188;BQB=0.999964;DP=2809;DP4=1302,1314,16,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.49722e-19;MQSB=0.479801;RPB=0.124621;SGB=124.567;VDB=0.704583;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.1:17901375 chr01:017901375 0 W/17901375-17901375 FN753-S Single Base Substitution G-C INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2753-S.SNP.1:17905812 chr01:017905812 0 W/17905812-17905812 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.852467;DP=5181;DP4=2492,2466,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11662e-11;MQSB=0.924274;RPB=0.863163;SGB=77.2904;VDB=0.890883;EFF=INTRON(MODIFIER||||355|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.1|2|1),INTRON(MODIFIER||||352|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.3|2|1),INTRON(MODIFIER||||323|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.4|2|1),INTRON(MODIFIER||||354|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.2|2|1),INTRON(MODIFIER||||288|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.5|1|1) FN2489.SNP.1:17906473 chr01:017906473 0 W/17906473-17906473 FN2489 SNP G -> A AC=1;AN=200;BQB=0.999284;DP=4793;DP4=2219,2307,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.20196e-14;MQSB=0.97297;RPB=0.680611;SGB=42.5108;VDB=0.946526;EFF=INTRON(MODIFIER||||355|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.1|3|1),INTRON(MODIFIER||||354|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.2|3|1),INTRON(MODIFIER||||352|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.3|3|1),INTRON(MODIFIER||||323|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.4|3|1),INTRON(MODIFIER||||288|LOC_Os01g32660|protein_coding|CODING|LOC_Os01g32660.5|2|1) FN2538-S.SNP.1:17913078 chr01:017913078 0 W/17913078-17913078 FN2538-S SNP A -> T AC=1;AN=198;BQB=0.0309646;DP=4162;DP4=1982,1979,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.7691e-09;MQSB=0.924186;RPB=0.325865;SGB=12.5396;VDB=0.711208;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.1:17918585 chr01:017918585 0 W/17918585-17918585 FN4069-S SNP A -> T AC=1;AN=182;BQB=0.293213;DP=2199;DP4=1071,1047,10,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.19535e-11;MQSB=0.960833;RPB=0.473503;SGB=48.2527;VDB=0.0636074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.1:17924307 chr01:017924307 0 W/17924307-17924307 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.979365;DP=2738;DP4=1204,1440,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.41478e-05;MQSB=0.985489;RPB=0.999886;SGB=26.3271;VDB=0.342553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.1:17933306 chr01:017933306 0 W/17933306-17933306 FN3901-S SNP T -> C AC=1;AN=158;BQB=0.853509;DP=2533;DP4=1158,1293,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.00319e-09;MQSB=0.819763;RPB=0.983659;SGB=26.1881;VDB=0.16204;EFF=INTRON(MODIFIER||||251|LOC_Os01g32710|protein_coding|CODING|LOC_Os01g32710.1|1|1) FN1563-S.SNP.1:17951280 chr01:017951280 0 W/17951280-17951280 FN1563-S Single Base Substitution A-T INTRON Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1075-S.SNP.1:17952043 chr01:017952043 0 W/17952043-17952043 FN1075-S Single Base Substitution A-G INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1413-S.SNP.1:17957461 chr01:017957461 0 W/17957461-17957461 FN1413-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1093-S.SNP.1:17969287 chr01:017969287 0 W/17969287-17969287 FN1093-S Single Base Substitution G-A INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4093-S.SNP.1:17979069 chr01:017979069 0 W/17979069-17979069 FN4093-S SNP T -> C AC=1;AN=182;BQB=0.997586;DP=2524;DP4=1026,1348,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.41933e-06;MQSB=0.676612;RPB=0.997408;SGB=32.1169;VDB=0.94573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.1:17979500 chr01:017979500 0 W/17979500-17979500 FN3839-S SNP C -> T AC=1;AN=190;BQB=0.354635;DP=2077;DP4=1153,753,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00048544;MQSB=0.177421;RPB=0.497572;SGB=58.2031;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.1:17983547 chr01:017983547 0 W/17983547-17983547 FN354-S Single Base Substitution G-A INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN-88.SNP.1:17988613 chr01:017988613 0 W/17988613-17988613 FN-88 Single Base Substitution G-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN828-S.SNP.1:17996391 chr01:017996391 0 W/17996391-17996391 FN828-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3941-S.SNP.1:18004503 chr01:018004503 0 W/18004503-18004503 FN3941-S SNP G -> A AC=1;AN=168;BQB=0.937791;DP=2116;DP4=1114,904,3,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00047259;MQB=0.0193293;MQSB=0.654804;RPB=0.390445;SGB=25.5891;VDB=0.419382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.1:18004915 chr01:018004915 0 W/18004915-18004915 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.521424;DP=3807;DP4=1805,1717,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000272181;MQSB=0.96812;RPB=0.0276222;SGB=31.1689;VDB=0.0200665;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G46|116|LOC_Os01g32810|protein_coding|CODING|LOC_Os01g32810.1|1|1) FN2489.SNP.1:18006079 chr01:018006079 0 W/18006079-18006079 FN2489 SNP A -> T AC=1;AN=200;BQB=0.751233;DP=4653;DP4=2191,2133,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.91336e-18;MQSB=0.963202;RPB=0.417871;SGB=137.158;VDB=0.749469;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.1:18008751 chr01:018008751 0 W/18008751-18008751 FN_N1-151-7 Single Base Substitution C-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1326-S.SNP.1:18010296 chr01:018010296 0 W/18010296-18010296 FN1326-S Single Base Substitution C-T INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN837-S.SNP.1:18013954 chr01:018013954 0 W/18013954-18013954 FN837-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3696-S.SNP.1:18016373 chr01:018016373 0 W/18016373-18016373 FN3696-S SNP A -> G AC=1;AN=190;BQB=0.999891;DP=2805;DP4=1284,1382,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.60535e-07;MQSB=0.893823;RPB=0.605621;SGB=15.9981;VDB=0.0768001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F159S|248|LOC_Os01g32830|protein_coding|CODING|LOC_Os01g32830.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V116|190|LOC_Os01g32830|protein_coding|CODING|LOC_Os01g32830.2|2|1) FN3399-S.SNP.1:18018899 chr01:018018899 0 W/18018899-18018899 FN3399-S SNP G -> T AC=2;AN=184;BQB=0.86202;DP=2356;DP4=1108,1153,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.95781e-09;MQSB=0.333909;RPB=0.955432;SGB=84.9167;VDB=0.411374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.1:18019721 chr01:018019721 0 W/18019721-18019721 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.783528;DP=4854;DP4=2244,2387,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.8599e-08;MQSB=0.98295;RPB=0.85857;SGB=26.8797;VDB=0.817527;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.1:18022671 chr01:018022671 0 W/18022671-18022671 FN-400 Single Base Substitution C-G INTRON HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN3050-S.SNP.1:18036535 chr01:018036535 0 W/18036535-18036535 FN3050-S SNP A -> G AC=2;AN=184;BQB=0.96608;DP=2734;DP4=1231,1327,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.57451e-12;MQSB=0.999996;RPB=0.231127;SGB=103.004;VDB=0.459449;EFF=UTR_5_PRIME(MODIFIER||67||54|LOC_Os01g32864|protein_coding|CODING|LOC_Os01g32864.1|1|1) FN1449-S.SNP.1:18037728 chr01:018037728 0 W/18037728-18037728 FN1449-S Single Base Substitution G-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2342.SNP.1:18038355 chr01:018038355 0 W/18038355-18038355 FN2342 SNP C -> A AC=2;AN=192;BQB=0.999911;DP=4646;DP4=2340,2009,24,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.81259e-21;MQSB=0.849965;RPB=0.630102;SGB=-1.78867;VDB=0.0996695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.1:18039249 chr01:018039249 0 W/18039249-18039249 FN3596-S SNP T -> A AC=1;AN=188;BQB=0.999862;DP=2625;DP4=1207,1340,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52358e-10;MQSB=0.921363;RPB=0.99539;SGB=53.7007;VDB=0.509281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.1:18039251 chr01:018039251 0 W/18039251-18039251 FN3596-S SNP G -> T AC=1;AN=188;BQB=0.940464;DP=2625;DP4=1170,1346,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.95179e-11;MQSB=0.95487;RPB=0.961603;SGB=71.6954;VDB=0.645118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.1:18055037 chr01:018055037 0 W/18055037-18055037 FN-196 Single Base Substitution A-G INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. 705-2.SNP.1:18056241 chr01:018056241 0 W/18056241-18056241 705-2 Single Base Substitution T-A INTERGENIC Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. FN2685-S.SNP.1:18058726 chr01:018058726 0 W/18058726-18058726 FN2685-S SNP A -> G AC=1;AN=200;BQB=0.197689;DP=4024;DP4=1665,2136,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.17614e-06;MQSB=0.887859;RPB=0.956896;SGB=-1.74624;VDB=0.858427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.1:18062517 chr01:018062517 0 W/18062517-18062517 FN3696-S SNP T -> A AC=1;AN=190;BQB=0.31178;DP=2738;DP4=1326,1277,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00070671;MQSB=0.99556;RPB=0.35825;SGB=49.0954;VDB=0.804268;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K487*|509|LOC_Os01g32890|protein_coding|CODING|LOC_Os01g32890.1|1|1) FN4069-S.SNP.1:18064935 chr01:018064935 0 W/18064935-18064935 FN4069-S SNP A -> G AC=1;AN=182;BQB=0.999959;DP=2752;DP4=1465,1185,22,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.07591e-19;MQSB=0.906454;RPB=0.915759;SGB=156.883;VDB=0.672261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N22D|152|LOC_Os01g32900|protein_coding|CODING|LOC_Os01g32900.1|1|1) FN4128-S.SNP.1:18065342 chr01:018065342 0 W/18065342-18065342 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.255405;DP=3242;DP4=1705,1437,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.06842e-07;MQSB=0.993173;RPB=0.966504;SGB=28.1658;VDB=0.876291;EFF=INTRON(MODIFIER||||152|LOC_Os01g32900|protein_coding|CODING|LOC_Os01g32900.1|1|1) FN-314.SNP.1:18069097 chr01:018069097 0 W/18069097-18069097 FN-314 Single Base Substitution A-G INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1385-S.SNP.1:18077388 chr01:018077388 0 W/18077388-18077388 FN1385-S Single Base Substitution C-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3541-S.SNP.1:18080199 chr01:018080199 0 W/18080199-18080199 FN3541-S SNP C -> T AC=1;AN=188;BQB=0.208228;DP=3080;DP4=1681,1304,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000447464;MQSB=0.864553;RPB=0.843456;SGB=13.3597;VDB=0.171769;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L34|112|LOC_Os01g32940|protein_coding|CODING|LOC_Os01g32940.1|1|1) FN448-S.SNP.1:18080199 chr01:018080199 0 W/18080199-18080199 FN448-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2480.SNP.1:18080373 chr01:018080373 0 W/18080373-18080373 FN2480 SNP C -> T AC=2;AN=200;BQB=0.145712;DP=3844;DP4=1854,1711,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.5353e-15;MQSB=0.961706;RPB=0.899493;SGB=112.373;VDB=0.401151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.1:18081609 chr01:018081609 0 W/18081609-18081609 FN3476-S SNP G -> A AC=1;AN=184;BQB=0.891647;DP=4375;DP4=2134,2079,16,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.22857e-14;MQSB=0.185975;RPB=0.703269;SGB=112.047;VDB=0.146452;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.1:18084250 chr01:018084250 0 W/18084250-18084250 FN3434-S SNP T -> A AC=2;AN=184;BQB=0.973851;DP=3035;DP4=1485,1436,21,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.38886e-21;MQSB=0.999095;RPB=0.999174;SGB=83.798;VDB=0.393237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.1:18087082 chr01:018087082 0 W/18087082-18087082 FN1280-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3681-S.SNP.1:18088788 chr01:018088788 0 W/18088788-18088788 FN3681-S SNP C -> A AC=1;AN=190;BQB=0.793192;DP=2210;DP4=715,1323,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.92321e-08;MQSB=1.20316e-10;RPB=0.711033;SGB=31.3213;VDB=0.624965;EFF=INTRON(MODIFIER||||334|LOC_Os01g32964|protein_coding|CODING|LOC_Os01g32964.1|7|1) FN3756-S.SNP.1:18099322 chr01:018099322 0 W/18099322-18099322 FN3756-S SNP A -> T AC=1;AN=190;BQB=0.93307;DP=2518;DP4=1238,1186,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95868e-06;MQSB=0.999218;RPB=0.992536;SGB=35.4339;VDB=0.245164;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.1:18099488 chr01:018099488 0 W/18099488-18099488 FN417-S Single Base Substitution G-C INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2085-S.SNP.1:18119707 chr01:018119707 0 W/18119707-18119707 FN2085-S SNP G -> A AC=1;AN=168;BQB=0.416984;DP=3665;DP4=1793,1819,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0480218;MQB=0.00522202;MQSB=0.19165;RPB=0.345267;SGB=-37.7974;VDB=0.399701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E892K|1371|LOC_Os01g32990|protein_coding|CODING|LOC_Os01g32990.1|3|1) FN3880-S.SNP.1:18121762 chr01:018121762 0 W/18121762-18121762 FN3880-S SNP A -> T AC=1;AN=158;BQB=0.817013;DP=2412;DP4=1120,1109,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0161692;MQB=3.56568e-08;MQSB=0.000265145;RPB=0.460541;SGB=28.5576;VDB=0.708022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.1:18121764 chr01:018121764 0 W/18121764-18121764 FN3880-S SNP A -> G AC=1;AN=158;BQB=0.821597;DP=2420;DP4=1165,1117,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0157025;MQB=4.09144e-07;MQSB=0.00177245;RPB=0.65741;SGB=7.56394;VDB=0.655694;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.1:18124957 chr01:018124957 0 W/18124957-18124957 FN985-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3783-S.SNP.1:18129134 chr01:018129134 0 W/18129134-18129134 FN3783-S SNP T -> A AC=2;AN=190;BQB=0.481754;DP=2777;DP4=1477,1204,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.46536e-12;MQSB=0.834624;RPB=0.954306;SGB=94.6341;VDB=0.717082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.1:18133732 chr01:018133732 0 W/18133732-18133732 FN1754-S SNP T -> A AC=1;AN=188;BQB=0.183535;DP=3306;DP4=1572,1686,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.30219e-09;MQSB=0.995994;RPB=0.946396;SGB=-36.9078;VDB=0.532323;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.1:18137210 chr01:018137210 0 W/18137210-18137210 FN-44 Single Base Substitution A-T INTRON Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN522-S.SNP.1:18139205 chr01:018139205 0 W/18139205-18139205 FN522-S Single Base Substitution C-T INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1024-S.SNP.1:18144472 chr01:018144472 0 W/18144472-18144472 FN1024-S Single Base Substitution C-G INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2403.SNP.1:18144992 chr01:018144992 0 W/18144992-18144992 FN2403 SNP G -> T AC=1;AN=200;BQB=0.868822;DP=4643;DP4=1935,2378,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48755e-08;MQSB=0.973296;RPB=0.963041;SGB=36.6644;VDB=0.250472;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.1:18145248 chr01:018145248 0 W/18145248-18145248 FN-366 Single Base Substitution C-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3366-S.SNP.1:18146890 chr01:018146890 0 W/18146890-18146890 FN3366-S SNP A -> G AC=2;AN=184;BQB=0.863644;DP=2738;DP4=1307,1341,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.24961e-12;MQSB=0.914593;RPB=0.38055;SGB=70.9657;VDB=0.369884;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.1:18148159 chr01:018148159 0 W/18148159-18148159 FN916-S Single Base Substitution C-T INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2295.SNP.1:18164377 chr01:018164377 0 W/18164377-18164377 FN2295 SNP G -> A AC=1;AN=192;BQB=0.867394;DP=4888;DP4=2282,2344,19,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.67951e-16;MQSB=0.648669;RPB=0.694035;SGB=22.9983;VDB=0.894987;EFF=INTRON(MODIFIER||||1183|LOC_Os01g33060|protein_coding|CODING|LOC_Os01g33060.1|1|1),INTRON(MODIFIER||||1028|LOC_Os01g33060|protein_coding|CODING|LOC_Os01g33060.2|1|1) FN2295.SNP.1:18164378 chr01:018164378 0 W/18164378-18164378 FN2295 SNP T -> A AC=1;AN=192;BQB=0.549134;DP=4863;DP4=2196,2329,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205634;MQB=1.62728e-15;MQSB=0.653789;RPB=0.863838;SGB=-9.12519;VDB=0.852439;EFF=INTRON(MODIFIER||||1183|LOC_Os01g33060|protein_coding|CODING|LOC_Os01g33060.1|1|1),INTRON(MODIFIER||||1028|LOC_Os01g33060|protein_coding|CODING|LOC_Os01g33060.2|1|1) FN_776-5-1.SNP.1:18175795 chr01:018175795 0 W/18175795-18175795 FN_776-5-1 Single Base Substitution A-T Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3858-S.SNP.1:18184207 chr01:018184207 0 W/18184207-18184207 FN3858-S SNP A -> T AC=1;AN=158;BQB=0.554935;DP=2339;DP4=1236,994,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.00363e-06;MQSB=0.974325;RPB=0.998907;SGB=21.4493;VDB=0.621001;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.1:18195634 chr01:018195634 0 W/18195634-18195634 FN681-S Single Base Substitution C-T INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3824-S.SNP.1:18195946 chr01:018195946 0 W/18195946-18195946 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.240108;DP=2660;DP4=1205,1343,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.57974e-05;MQSB=0.890255;RPB=0.36485;SGB=15.9981;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.1:18197278 chr01:018197278 0 W/18197278-18197278 FN3311-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN596-S.SNP.1:18201074 chr01:018201074 0 W/18201074-18201074 FN596-S Single Base Substitution T-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1156-XA21.SNP.1:18210458 chr01:018210458 0 W/18210458-18210458 FN1156-XA21 Single Base Substitution T-C INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.1:18210460 chr01:018210460 0 W/18210460-18210460 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN705-S.SNP.1:18217342 chr01:018217342 0 W/18217342-18217342 FN705-S Single Base Substitution G-A INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN1250-S.SNP.1:18218971 chr01:018218971 0 W/18218971-18218971 FN1250-S Single Base Substitution C-T INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN671-S.SNP.1:18221628 chr01:018221628 0 W/18221628-18221628 FN671-S Single Base Substitution C-T INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3292-S.SNP.1:18234376 chr01:018234376 0 W/18234376-18234376 FN3292-S SNP A -> G AC=2;AN=184;BQB=0.981921;DP=2837;DP4=1576,1144,14,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.12801e-17;MQSB=0.523364;RPB=0.470556;SGB=99.14;VDB=0.48298;EFF=INTRON(MODIFIER||||342|LOC_Os01g33120|protein_coding|CODING|LOC_Os01g33120.1|4|1) FN3538-S.SNP.1:18236942 chr01:018236942 0 W/18236942-18236942 FN3538-S SNP C -> T AC=1;AN=188;BQB=0.987842;DP=2649;DP4=1256,1335,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.54745e-09;MQSB=0.999816;RPB=0.993549;SGB=67.1521;VDB=0.0991356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R22H|342|LOC_Os01g33120|protein_coding|CODING|LOC_Os01g33120.1|1|1) FN2753-S.SNP.1:18241368 chr01:018241368 0 W/18241368-18241368 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.556303;DP=4028;DP4=2361,1306,9,2;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0263158;MQB=0.999701;MQSB=1.69658e-14;RPB=0.717249;SGB=13.8539;VDB=0.979692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L448P|744|LOC_Os01g33136|protein_coding|CODING|LOC_Os01g33136.1|5|1) FN3958-S.SNP.1:18248169 chr01:018248169 0 W/18248169-18248169 FN3958-S SNP G -> A AC=1;AN=168;BQB=0.934758;DP=2667;DP4=1227,1363,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.25437e-07;MQSB=0.938887;RPB=0.496787;SGB=43.3113;VDB=0.249966;EFF=INTRON(MODIFIER||||95|LOC_Os01g33142|protein_coding|CODING|LOC_Os01g33142.1|2|1) FN723-S.SNP.1:18249609 chr01:018249609 0 W/18249609-18249609 FN723-S Single Base Substitution G-A INTRON HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN-278.SNP.1:18254458 chr01:018254458 0 W/18254458-18254458 FN-278 Single Base Substitution C-T INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2333.SNP.1:18263342 chr01:018263342 0 W/18263342-18263342 FN2333 SNP T -> A AC=1;AN=190;BQB=0.779546;DP=4779;DP4=2175,2360,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.29065e-11;MQSB=0.851691;RPB=0.0727155;SGB=85.7252;VDB=0.537182;EFF=INTRON(MODIFIER||||116|LOC_Os01g33160|protein_coding|CODING|LOC_Os01g33160.1|1|1) FN3824-S.SNP.1:18271027 chr01:018271027 0 W/18271027-18271027 FN3824-S SNP G -> C AC=1;AN=190;BQB=0.667878;DP=2622;DP4=1178,1374,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07695e-05;MQSB=0.999333;RPB=0.636977;SGB=30.8803;VDB=0.310231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.1:18273899 chr01:018273899 0 W/18273899-18273899 FN1009-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2537-S.SNP.1:18273970 chr01:018273970 0 W/18273970-18273970 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.999023;DP=4124;DP4=1817,2079,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.00557711;MQB=0.50848;MQSB=3.69388e-12;RPB=0.568726;SGB=61.7198;VDB=0.80475;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1627T|1967|LOC_Os01g33190|protein_coding|CODING|LOC_Os01g33190.1|8|1) FN2293.SNP.1:18274032 chr01:018274032 0 W/18274032-18274032 FN2293 SNP G -> C AC=1;AN=192;BQB=0.53815;DP=4659;DP4=2203,2139,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00407813;MQB=0.00387482;MQSB=8.42327e-07;RPB=0.294563;SGB=-7.9965;VDB=0.458761;EFF=INTRON(MODIFIER||||1967|LOC_Os01g33190|protein_coding|CODING|LOC_Os01g33190.1|7|1) FN3324-S.SNP.1:18297683 chr01:018297683 0 W/18297683-18297683 FN3324-S SNP T -> A AC=2;AN=184;BQB=0.635631;DP=2993;DP4=1234,1582,5,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.01569e-12;MQSB=0.470426;RPB=0.784985;SGB=23.542;VDB=0.0594934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:18313692 chr01:018313692 0 W/18313692-18313692 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.161342;DP=4234;DP4=1957,2103,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.00448748;MQB=0.999842;MQSB=0.0656616;RPB=0.17126;SGB=61.7198;VDB=0.710144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V790L|1483|LOC_Os01g33250|protein_coding|CODING|LOC_Os01g33250.1|1|1) FN401-S.SNP.1:18320343 chr01:018320343 0 W/18320343-18320343 FN401-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g33260 retrotransposon protein, putative, unclassified, expressed SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN1022-S.SNP.1:18326070 chr01:018326070 0 W/18326070-18326070 FN1022-S Single Base Substitution G-C INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3438-S.SNP.1:18329138 chr01:018329138 0 W/18329138-18329138 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.902068;DP=2572;DP4=1311,1167,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.139e-08;MQSB=0.990332;RPB=0.429858;SGB=48.7425;VDB=0.143863;EFF=INTRON(MODIFIER||||2342|LOC_Os01g33260|protein_coding|CODING|LOC_Os01g33260.1|13|1) FN3857-S.SNP.1:18333179 chr01:018333179 0 W/18333179-18333179 FN3857-S SNP G -> T AC=1;AN=158;BQB=0.959254;DP=2402;DP4=1144,1190,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.36761e-08;MQSB=0.990401;RPB=0.381095;SGB=55.806;VDB=0.809581;EFF=INTRON(MODIFIER||||2342|LOC_Os01g33260|protein_coding|CODING|LOC_Os01g33260.1|6|1) FN3740-S.SNP.1:18334722 chr01:018334722 0 W/18334722-18334722 FN3740-S SNP T -> C AC=2;AN=190;BQB=0.551472;DP=2593;DP4=986,1419,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.1522e-15;MQSB=0.997623;RPB=0.681847;SGB=75.1932;VDB=0.537838;EFF=INTRON(MODIFIER||||2342|LOC_Os01g33260|protein_coding|CODING|LOC_Os01g33260.1|4|1) FN3517-S.SNP.1:18337293 chr01:018337293 0 W/18337293-18337293 FN3517-S SNP A -> C AC=2;AN=188;BQB=0.998627;DP=2705;DP4=1235,1376,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.72816e-16;MQSB=0.91931;RPB=0.964384;SGB=48.9658;VDB=0.0663609;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.1:18337293 chr01:018337293 0 W/18337293-18337293 FN_N1-220-1 Single Base Substitution A-C Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3639-S.SNP.1:18342251 chr01:018342251 0 W/18342251-18342251 FN3639-S SNP T -> A AC=1;AN=190;BQB=0.998807;DP=2770;DP4=1511,1174,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10305e-06;MQSB=0.963992;RPB=0.86267;SGB=25.439;VDB=0.600763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.1:18344134 chr01:018344134 0 W/18344134-18344134 FN3451-S SNP A -> T AC=2;AN=184;BQB=0.961459;DP=3060;DP4=1421,1513,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.06822e-15;MQSB=0.975692;RPB=0.870116;SGB=130.135;VDB=0.20577;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.1:18348340 chr01:018348340 0 W/18348340-18348340 FN984-S Single Base Substitution T-A INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2781-S.SNP.1:18355731 chr01:018355731 0 W/18355731-18355731 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.991887;DP=4172;DP4=1690,2251,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.63264e-06;MQSB=0.46701;RPB=0.262425;SGB=36.5539;VDB=0.364749;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.1:18356074 chr01:018356074 0 W/18356074-18356074 FN3384-S SNP G -> T AC=1;AN=184;BQB=0.631372;DP=3183;DP4=1405,1656,8,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.70781e-10;MQSB=0.990291;RPB=0.992328;SGB=43.4494;VDB=0.511338;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.1:18364286 chr01:018364286 0 W/18364286-18364286 FN815-S Single Base Substitution C-T INTERGENIC HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN815-S.SNP.1:18364287 chr01:018364287 0 W/18364287-18364287 FN815-S Single Base Substitution A-T INTERGENIC HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN502-S.SNP.1:18366849 chr01:018366849 0 W/18366849-18366849 FN502-S Single Base Substitution A-T INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN450-S.SNP.1:18368594 chr01:018368594 0 W/18368594-18368594 FN450-S Single Base Substitution T-C INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1024-S.SNP.1:18369455 chr01:018369455 0 W/18369455-18369455 FN1024-S Single Base Substitution A-G INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-409.SNP.1:18376534 chr01:018376534 0 W/18376534-18376534 FN-409 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g33370 zinc-binding protein, putative, expressed SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN2774-S.SNP.1:18385677 chr01:018385677 0 W/18385677-18385677 FN2774-S SNP G -> C AC=1;AN=198;BQB=0.871637;DP=4233;DP4=1981,2074,10,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.58933e-14;MQSB=0.799244;RPB=0.635414;SGB=94.0758;VDB=0.749157;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.1:18397057 chr01:018397057 0 W/18397057-18397057 FN_830-6-1 Single Base Substitution T-C Homo LOC_Os01g33420 glycosyl hydrolase family protein 27, putative, expressed SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2252-S.SNP.1:18401085 chr01:018401085 0 W/18401085-18401085 FN2252-S SNP A -> G AC=1;AN=190;BQB=0.211964;DP=4851;DP4=2222,2012,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54628e-11;MQSB=0.842624;RPB=0.497415;SGB=-38.1089;VDB=0.315933;EFF=INTRON(MODIFIER||||649|LOC_Os01g33420|protein_coding|CODING|LOC_Os01g33420.1|1|1) FN2252-S.SNP.1:18401090 chr01:018401090 0 W/18401090-18401090 FN2252-S SNP A -> C AC=1;AN=190;BQB=0.823358;DP=4874;DP4=2227,2274,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.6901e-12;MQSB=0.626448;RPB=0.94025;SGB=57.4238;VDB=0.589894;EFF=INTRON(MODIFIER||||649|LOC_Os01g33420|protein_coding|CODING|LOC_Os01g33420.1|1|1) FN2666-S.SNP.1:18421985 chr01:018421985 0 W/18421985-18421985 FN2666-S SNP T -> A AC=1;AN=200;BQB=0.998502;DP=4341;DP4=2032,2064,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.93709e-13;MQSB=0.899497;RPB=0.791088;SGB=42.5108;VDB=0.0722182;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.1:18423953 chr01:018423953 0 W/18423953-18423953 FN4009-S SNP G -> A AC=1;AN=168;BQB=0.445069;DP=2689;DP4=1207,1378,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000218235;MQSB=0.329694;RPB=0.918757;SGB=10.0307;VDB=0.494821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.1:18426422 chr01:018426422 0 W/18426422-18426422 FN3676-S SNP C -> A AC=1;AN=190;BQB=0.809247;DP=2811;DP4=1489,1229,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24296e-10;MQSB=0.999125;RPB=0.724274;SGB=94.6341;VDB=0.199794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L308I|1515|LOC_Os01g33460|protein_coding|CODING|LOC_Os01g33460.1|2|1) FN3827-S.SNP.1:18428137 chr01:018428137 0 W/18428137-18428137 FN3827-S SNP C -> T AC=1;AN=190;BQB=0.842766;DP=2842;DP4=1515,1245,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.16974e-10;MQSB=0.747435;RPB=0.58453;SGB=76.4186;VDB=0.832625;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q656*|1515|LOC_Os01g33460|protein_coding|CODING|LOC_Os01g33460.1|6|1);LOF=(LOC_Os01g33460|LOC_Os01g33460|1|1.00);NMD=(LOC_Os01g33460|LOC_Os01g33460|1|1.00) FN1064-S.SNP.1:18431715 chr01:018431715 0 W/18431715-18431715 FN1064-S Single Base Substitution A-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2697-S.SNP.1:18434695 chr01:018434695 0 W/18434695-18434695 FN2697-S SNP C -> T AC=1;AN=200;BQB=0.836205;DP=4664;DP4=2307,2151,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000428816;MQB=9.71396e-11;MQSB=0.991567;RPB=0.979849;SGB=61.9006;VDB=0.620965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.1:18437500 chr01:018437500 0 W/18437500-18437500 FN1383-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2123-S.SNP.1:18438362 chr01:018438362 0 W/18438362-18438362 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.0226827;DP=3649;DP4=1311,2302,20,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.26871e-12;MQSB=0.929928;RPB=0.950962;SGB=-118.616;VDB=0.49806;EFF=UTR_3_PRIME(MODIFIER||207||336|LOC_Os01g33490|protein_coding|CODING|LOC_Os01g33490.1|1|1) FN2205-S.SNP.1:18444789 chr01:018444789 0 W/18444789-18444789 FN2205-S SNP C -> T AC=1;AN=190;BQB=0.42237;DP=3376;DP4=1568,1407,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000296209;MQB=7.43984e-05;MQSB=5.09879e-13;RPB=0.975434;SGB=39.6545;VDB=0.116505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R98W|157|LOC_Os01g33510|protein_coding|CODING|LOC_Os01g33510.1|2|1) FN1470-S.SNP.1:18445191 chr01:018445191 0 W/18445191-18445191 FN1470-S Single Base Substitution A-G INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3560-S.SNP.1:18451793 chr01:018451793 0 W/18451793-18451793 FN3560-S SNP C -> G AC=2;AN=188;BQB=0.984976;DP=2234;DP4=1357,799,21,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.52283e-19;MQSB=0.50404;RPB=0.572548;SGB=144.388;VDB=0.374618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q330H|613|LOC_Os01g33520|protein_coding|CODING|LOC_Os01g33520.1|5|1) FN2202-S.SNP.1:18452643 chr01:018452643 0 W/18452643-18452643 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.848851;DP=4871;DP4=2250,2201,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000271386;MQSB=0.0358151;RPB=0.387414;SGB=25.439;VDB=0.748814;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P112L|613|LOC_Os01g33520|protein_coding|CODING|LOC_Os01g33520.1|2|1) FN1575-S.SNP.1:18453235 chr01:018453235 0 W/18453235-18453235 FN1575-S Single Base Substitution C-G INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN445-S.SNP.1:18455408 chr01:018455408 0 W/18455408-18455408 FN445-S Single Base Substitution G-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1382-S.SNP.1:18459696 chr01:018459696 0 W/18459696-18459696 FN1382-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN662-S.SNP.1:18473218 chr01:018473218 0 W/18473218-18473218 FN662-S Single Base Substitution C-T INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN2584-S.SNP.1:18474741 chr01:018474741 0 W/18474741-18474741 FN2584-S SNP G -> A AC=2;AN=198;BQB=0.241875;DP=4102;DP4=1728,2011,33,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.0014627;MQB=1.23178e-30;MQSB=0.621627;RPB=0.0769557;SGB=163.879;VDB=0.00516133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.1:18482423 chr01:018482423 0 W/18482423-18482423 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.193388;DP=3987;DP4=1831,1753,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000250815;MQB=3.41229e-06;MQSB=0.257376;RPB=0.758565;SGB=23.6597;VDB=0.960004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R16Q|322|LOC_Os01g33580|protein_coding|CODING|LOC_Os01g33580.1|2|1) FN1280-S.SNP.1:18485249 chr01:018485249 0 W/18485249-18485249 FN1280-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g33590 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4094-S.SNP.1:18485249 chr01:018485249 0 W/18485249-18485249 FN4094-S SNP G -> A AC=1;AN=182;BQB=0.981448;DP=2837;DP4=1332,1440,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.36073e-08;MQSB=0.99661;RPB=0.948918;SGB=62.1548;VDB=0.00401057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V8I|879|LOC_Os01g33590|protein_coding|CODING|LOC_Os01g33590.1|1|1) FN759-S.SNP.1:18489695 chr01:018489695 0 W/18489695-18489695 FN759-S Single Base Substitution C-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN759-S.SNP.1:18489697 chr01:018489697 0 W/18489697-18489697 FN759-S Single Base Substitution G-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2307.SNP.1:18489953 chr01:018489953 0 W/18489953-18489953 FN2307 SNP G -> T AC=1;AN=192;BQB=0.748949;DP=5289;DP4=2315,2482,11,18;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0111552;MQB=0.989266;MQSB=0.188297;RPB=0.817525;SGB=26.127;VDB=0.198432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.1:18491031 chr01:018491031 0 W/18491031-18491031 FN3751-S SNP C -> G AC=2;AN=190;BQB=0.632948;DP=2357;DP4=1263,940,18,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.0012728;MQB=1.18555e-12;MQSB=0.764517;RPB=0.766694;SGB=117.403;VDB=0.918075;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.1:18493893 chr01:018493893 0 W/18493893-18493893 FN714-S Single Base Substitution G-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1278-S.SNP.1:18502084 chr01:018502084 0 W/18502084-18502084 FN1278-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1086-S.SNP.1:18517171 chr01:018517171 0 W/18517171-18517171 FN1086-S Single Base Substitution T-A INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-190.SNP.1:18519106 chr01:018519106 0 W/18519106-18519106 FN-190 Single Base Substitution C-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-301.SNP.1:18519552 chr01:018519552 0 W/18519552-18519552 FN-301 Single Base Substitution G-C INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3760-S.SNP.1:18519552 chr01:018519552 0 W/18519552-18519552 FN3760-S SNP G -> C AC=2;AN=190;BQB=0.703961;DP=2928;DP4=1731,1052,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.61412e-13;MQSB=0.948905;RPB=0.0359317;SGB=92.9626;VDB=0.0631966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.1:18519552 chr01:018519552 0 W/18519552-18519552 FN3848-S SNP G -> C AC=2;AN=158;BQB=0.334754;DP=2628;DP4=1475,1005,22,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.85704e-11;MQSB=0.705685;RPB=0.907901;SGB=130.087;VDB=0.495891;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.1:18519552 chr01:018519552 0 W/18519552-18519552 FN963-S Single Base Substitution G-C INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2437.SNP.1:18526194 chr01:018526194 0 W/18526194-18526194 FN2437 SNP C -> G AC=2;AN=200;BQB=0.844172;DP=4861;DP4=1845,2630,24,29;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0;MQB=3.41637e-14;MQSB=0.00217281;RPB=0.401739;SGB=180.871;VDB=0.181177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.1:18526871 chr01:018526871 0 W/18526871-18526871 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.967399;DP=3042;DP4=1521,1400,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=3.84705e-05;MQSB=8.84622e-08;RPB=0.0771522;SGB=30.8803;VDB=0.0158634;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.1:18535320 chr01:018535320 0 W/18535320-18535320 FN917-S Single Base Substitution A-G INTRON HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3699-S.SNP.1:18591704 chr01:018591704 0 W/18591704-18591704 FN3699-S SNP T -> C AC=2;AN=190;BQB=0.98501;DP=2962;DP4=1519,1247,18,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.21972e-13;MQSB=0.999986;RPB=0.66174;SGB=162.804;VDB=0.136717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.1:18604157 chr01:018604157 0 W/18604157-18604157 FN3700-S SNP A -> G AC=1;AN=190;BQB=0.308218;DP=2785;DP4=1282,1394,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.45887e-05;MQSB=0.885028;RPB=0.519747;SGB=21.1058;VDB=0.398536;EFF=INTRON(MODIFIER||||603|LOC_Os01g33800|protein_coding|CODING|LOC_Os01g33800.1|3|1),INTRON(MODIFIER||||391|LOC_Os01g33800|protein_coding|CODING|LOC_Os01g33800.2|3|1) FN-286.SNP.1:18604199 chr01:018604199 0 W/18604199-18604199 FN-286 Single Base Substitution G-T INTRON HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN677-S.SNP.1:18621681 chr01:018621681 0 W/18621681-18621681 FN677-S Single Base Substitution G-T INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3863-S.SNP.1:18640090 chr01:018640090 0 W/18640090-18640090 FN3863-S SNP A -> C AC=1;AN=158;BQB=0.956199;DP=2215;DP4=1105,1016,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.37086e-07;MQSB=0.99999;RPB=0.957806;SGB=9.60209;VDB=0.551648;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acC|T395|779|LOC_Os01g33869|protein_coding|CODING|LOC_Os01g33869.1|2|1) FN2215-S.SNP.1:18650545 chr01:018650545 0 W/18650545-18650545 FN2215-S SNP C -> T AC=2;AN=190;BQB=0.855785;DP=1651;DP4=827,634,9,3;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.000582315;MQSB=0.885261;RPB=0.91827;SGB=49.0954;VDB=0.70085;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.1:18653059 chr01:018653059 0 W/18653059-18653059 FN4081-S SNP G -> A AC=1;AN=182;BQB=0.732901;DP=3447;DP4=1733,1626,12,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.5941e-10;MQSB=0.977615;RPB=0.986628;SGB=38.2092;VDB=0.637969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.1:18658910 chr01:018658910 0 W/18658910-18658910 FN3835-S SNP A -> G AC=1;AN=190;BQB=0.583889;DP=3321;DP4=2002,1144,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.52223e-07;MQSB=0.838488;RPB=0.668017;SGB=31.3213;VDB=0.462928;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.1:18676618 chr01:018676618 0 W/18676618-18676618 FN470-S Single Base Substitution A-G INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN623-S.SNP.1:18678089 chr01:018678089 0 W/18678089-18678089 FN623-S Single Base Substitution G-T INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN623-S.SNP.1:18678090 chr01:018678090 0 W/18678090-18678090 FN623-S Single Base Substitution C-T INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2340.SNP.1:18681151 chr01:018681151 0 W/18681151-18681151 FN2340 SNP G -> T AC=1;AN=192;BQB=0.156392;DP=4897;DP4=2394,2112,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00061262;MQB=5.84149e-10;MQSB=0.658409;RPB=0.979472;SGB=75.4235;VDB=0.534092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.1:18681679 chr01:018681679 0 W/18681679-18681679 FN2634-S SNP C -> T AC=1;AN=200;BQB=0.075443;DP=4279;DP4=1884,1899,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34215e-11;MQSB=0.437833;RPB=0.983219;SGB=109.527;VDB=0.677329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.1:18681749 chr01:018681749 0 W/18681749-18681749 FN3452-S SNP G -> T AC=1;AN=184;BQB=0.841734;DP=3483;DP4=1522,1859,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.74111e-07;MQSB=0.856526;RPB=0.812418;SGB=35.7479;VDB=0.726211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.1:18683983 chr01:018683983 0 W/18683983-18683983 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.878891;DP=2830;DP4=1366,1367,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23963e-07;MQSB=0.424306;RPB=0.109528;SGB=48.7425;VDB=0.0210124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:18688777 chr01:018688777 0 W/18688777-18688777 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.889261;DP=4703;DP4=2262,2181,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021263;MQB=2.07623e-07;MQSB=0.996777;RPB=0.9843;SGB=36.6644;VDB=0.116528;EFF=INTRON(MODIFIER||||713|LOC_Os01g33960|protein_coding|CODING|LOC_Os01g33960.1|7|1) FN3418-S.SNP.1:18707270 chr01:018707270 0 W/18707270-18707270 FN3418-S SNP C -> G AC=1;AN=184;BQB=0.949078;DP=2679;DP4=1407,1197,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0119448;MQB=0.00181129;MQSB=7.3917e-07;RPB=0.540471;SGB=35.1773;VDB=0.315764;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.1:18713849 chr01:018713849 0 W/18713849-18713849 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.990601;DP=3049;DP4=1550,1410,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.41698e-09;MQSB=0.959172;RPB=0.428309;SGB=57.786;VDB=0.90397;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.1:18717100 chr01:018717100 0 W/18717100-18717100 FN4124-S SNP T -> C AC=1;AN=182;BQB=0.927804;DP=3134;DP4=1410,1657,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.29952e-07;MQSB=0.913913;RPB=0.991051;SGB=28.6061;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.1:18722266 chr01:018722266 0 W/18722266-18722266 FN1062-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g34010 expressed protein SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1650-S.SNP.1:18736798 chr01:018736798 0 W/18736798-18736798 FN1650-S Single Base Substitution C-A INTRON Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1310-S.SNP.1:18737099 chr01:018737099 0 W/18737099-18737099 FN1310-S Single Base Substitution G-A INTRON HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN893-S.SNP.1:18737321 chr01:018737321 0 W/18737321-18737321 FN893-S Single Base Substitution C-G INTRON HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3385-S.SNP.1:18770095 chr01:018770095 0 W/18770095-18770095 FN3385-S SNP G -> A AC=2;AN=184;BQB=0.9199;DP=2779;DP4=1379,1281,10,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.67937e-15;MQSB=0.858062;RPB=0.965777;SGB=53.5365;VDB=0.176884;EFF=INTRON(MODIFIER||||848|LOC_Os01g34080|protein_coding|CODING|LOC_Os01g34080.1|7|1) FN2175-S.SNP.1:18777520 chr01:018777520 0 W/18777520-18777520 FN2175-S SNP C -> A AC=1;AN=168;BQB=0.0114521;DP=3356;DP4=1357,1933,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.15137e-05;MQSB=0.998723;RPB=0.982998;SGB=-38.3665;VDB=0.433353;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.1:18779889 chr01:018779889 0 W/18779889-18779889 FN953-S Single Base Substitution C-T INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3312-S.SNP.1:18781996 chr01:018781996 0 W/18781996-18781996 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.998959;DP=3118;DP4=1796,1186,17,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.1441e-12;MQSB=0.999847;RPB=0.0415922;SGB=-12.1051;VDB=0.322446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.1:18782848 chr01:018782848 0 W/18782848-18782848 FN1422-S Single Base Substitution C-T INTERGENIC Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1042-S.SNP.1:18788652 chr01:018788652 0 W/18788652-18788652 FN1042-S Single Base Substitution G-C INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN854-S.SNP.1:18789871 chr01:018789871 0 W/18789871-18789871 FN854-S Single Base Substitution T-C INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2788-S.SNP.1:18790853 chr01:018790853 0 W/18790853-18790853 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.654188;DP=3936;DP4=1846,1906,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.1666e-08;MQSB=0.999722;RPB=0.933167;SGB=29.3443;VDB=0.730702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.1:18796985 chr01:018796985 0 W/18796985-18796985 FN1369-S Single Base Substitution A-G INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN742-S.SNP.1:18797630 chr01:018797630 0 W/18797630-18797630 FN742-S Single Base Substitution G-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN497-S.SNP.1:18799251 chr01:018799251 0 W/18799251-18799251 FN497-S Single Base Substitution T-C INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2315.SNP.1:18803689 chr01:018803689 0 W/18803689-18803689 FN2315 SNP A -> G AC=1;AN=192;BQB=0.675185;DP=4944;DP4=2228,2426,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2792e-16;MQSB=0.87429;RPB=0.985396;SGB=93.2452;VDB=0.38487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.1:18804388 chr01:018804388 0 W/18804388-18804388 FN2657-S SNP T -> C AC=1;AN=200;BQB=0.849841;DP=4922;DP4=2375,2363,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.22555e-08;MQSB=0.73241;RPB=0.282052;SGB=26.8797;VDB=0.969317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.1:18807870 chr01:018807870 0 W/18807870-18807870 FN1363-S Single Base Substitution G-A INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1493-S.SNP.1:18808172 chr01:018808172 0 W/18808172-18808172 FN1493-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g34140 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1493-S.SNP.1:18808174 chr01:018808174 0 W/18808174-18808174 FN1493-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN-99.SNP.1:18809085 chr01:018809085 0 W/18809085-18809085 FN-99 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os01g34140 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2091-S.SNP.1:18810718 chr01:018810718 0 W/18810718-18810718 FN2091-S SNP G -> T AC=1;AN=168;BQB=0.162675;DP=3662;DP4=1787,1824,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.0933916;MQB=0.670501;MQSB=0.000412337;RPB=0.939024;SGB=-110.908;VDB=0.815582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T727N|1813|LOC_Os01g34140|protein_coding|CODING|LOC_Os01g34140.1|4|1) FN1374-S.SNP.1:18818104 chr01:018818104 0 W/18818104-18818104 FN1374-S Single Base Substitution T-C INTERGENIC Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2612-S.SNP.1:18830047 chr01:018830047 0 W/18830047-18830047 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.999909;DP=3739;DP4=1887,1665,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.25251e-07;MQSB=0.470319;RPB=0.0776162;SGB=67.9293;VDB=0.0459823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.1:18830648 chr01:018830648 0 W/18830648-18830648 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.923109;DP=3599;DP4=1819,1683,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.02387e-14;MQSB=0.990632;RPB=0.999399;SGB=67.8739;VDB=0.377444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.1:18841235 chr01:018841235 0 W/18841235-18841235 FN1025-S Single Base Substitution C-G INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN594-S.SNP.1:18843298 chr01:018843298 0 W/18843298-18843298 FN594-S Single Base Substitution A-G INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN951-S.SNP.1:18843691 chr01:018843691 0 W/18843691-18843691 FN951-S Single Base Substitution G-A INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN-195.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN-195 Single Base Substitution C-T INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1134-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN1134-S Single Base Substitution C-T INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN1449-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN1449-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN1602-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN1602-S Single Base Substitution C-T INTERGENIC Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2421.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN2421 SNP C -> T AC=1;AN=200;BQB=0.044287;DP=4334;DP4=2208,1760,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31132e-11;MQSB=0.999922;RPB=0.998787;SGB=42.5108;VDB=0.394611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.995407;DP=3044;DP4=1460,1508,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.01105e-09;MQSB=0.891034;RPB=0.525325;SGB=50.1574;VDB=0.280677;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN4051-S SNP C -> T AC=2;AN=168;BQB=0.995442;DP=2461;DP4=1340,1005,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.38457e-14;MQSB=0.922385;RPB=0.857168;SGB=118.635;VDB=0.313699;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.64757;DP=2569;DP4=1266,1215,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.54446e-10;MQSB=0.863472;RPB=0.376567;SGB=74.528;VDB=0.883344;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN435-S Single Base Substitution C-T INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN998-S.SNP.1:18845021 chr01:018845021 0 W/18845021-18845021 FN998-S Single Base Substitution C-T INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-202.SNP.1:18846146 chr01:018846146 0 W/18846146-18846146 FN-202 Single Base Substitution C-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3332-S.SNP.1:18847789 chr01:018847789 0 W/18847789-18847789 FN3332-S SNP C -> T AC=2;AN=184;BQB=0.778222;DP=3750;DP4=1822,1772,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.3674e-13;MQSB=0.411775;RPB=0.950315;SGB=95.6183;VDB=0.720466;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.1:18852304 chr01:018852304 0 W/18852304-18852304 FN4134-S SNP A -> G AC=2;AN=182;BQB=0.141108;DP=1892;DP4=643,1183,10,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.77007e-13;MQSB=0.999614;RPB=0.325129;SGB=86.4761;VDB=0.900514;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.1:18858350 chr01:018858350 0 W/18858350-18858350 FN2388 SNP T -> C AC=1;AN=200;BQB=0.866027;DP=5156;DP4=2499,2342,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25784e-13;MQSB=0.877827;RPB=0.985249;SGB=118.737;VDB=0.674949;EFF=INTERGENIC(MODIFIER||||||||||1) FN-148.SNP.1:18859958 chr01:018859958 0 W/18859958-18859958 FN-148 Single Base Substitution C-A INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2724-S.SNP.1:18863538 chr01:018863538 0 W/18863538-18863538 FN2724-S SNP G -> A AC=1;AN=200;BQB=0.814183;DP=4587;DP4=2309,1981,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84299e-06;MQSB=0.984165;RPB=0.969842;SGB=35.8441;VDB=0.842929;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.1:18867511 chr01:018867511 0 W/18867511-18867511 FN724-S Single Base Substitution A-G INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN-379.SNP.1:18872575 chr01:018872575 0 W/18872575-18872575 FN-379 Single Base Substitution C-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN2246-S.SNP.1:18882631 chr01:018882631 0 W/18882631-18882631 FN2246-S SNP C -> A AC=2;AN=190;BQB=0.907055;DP=4574;DP4=2021,2287,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000437254;MQB=1.5242e-19;MQSB=0.795568;RPB=0.613625;SGB=77.2911;VDB=0.199112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N843K|1252|LOC_Os01g34250|protein_coding|CODING|LOC_Os01g34250.1|3|1) FN2325.SNP.1:18884156 chr01:018884156 0 W/18884156-18884156 FN2325 SNP G -> A AC=1;AN=192;BQB=0.999991;DP=5041;DP4=2366,2437,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000793493;MQB=7.4398e-10;MQSB=0.151152;RPB=0.998355;SGB=81.1609;VDB=0.591142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.1:18892358 chr01:018892358 0 W/18892358-18892358 FN2136-S SNP T -> A AC=1;AN=168;BQB=0.0557693;DP=4128;DP4=2296,1773,26,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.1101e-12;MQSB=0.986303;RPB=0.740932;SGB=-209.742;VDB=0.167465;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.1:18892457 chr01:018892457 0 W/18892457-18892457 FN942-S Single Base Substitution G-A INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2611-S.SNP.1:18893916 chr01:018893916 0 W/18893916-18893916 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.353691;DP=5152;DP4=2357,2499,13,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.85716e-19;MQSB=0.633153;RPB=0.936971;SGB=-42.8173;VDB=0.943617;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.1:18895994 chr01:018895994 0 W/18895994-18895994 FN624-S Single Base Substitution T-A INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2434.SNP.1:18896156 chr01:018896156 0 W/18896156-18896156 FN2434 SNP G -> A AC=1;AN=200;BQB=0.922202;DP=4145;DP4=2035,1929,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0053e-06;MQSB=0.886761;RPB=0.908442;SGB=49.6594;VDB=0.70085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.1:18902166 chr01:018902166 0 W/18902166-18902166 FN1545-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os01g34290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN417-S.SNP.1:18905914 chr01:018905914 0 W/18905914-18905914 FN417-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN620-S.SNP.1:18906859 chr01:018906859 0 W/18906859-18906859 FN620-S Single Base Substitution T-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN4224-S.SNP.1:18911546 chr01:018911546 0 W/18911546-18911546 FN4224-S SNP T -> A AC=2;AN=170;BQB=0.943963;DP=2299;DP4=1279,948,18,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.45789e-13;MQSB=0.928134;RPB=0.998846;SGB=79.6325;VDB=0.249453;EFF=INTRON(MODIFIER||||1516|LOC_Os01g34310|protein_coding|CODING|LOC_Os01g34310.1|1|1) FN2403.SNP.1:18912901 chr01:018912901 0 W/18912901-18912901 FN2403 SNP C -> T AC=1;AN=200;BQB=0.980319;DP=3866;DP4=1751,1841,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00103466;MQB=4.29242e-07;MQSB=0.886476;RPB=0.465769;SGB=63.4749;VDB=0.621001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T472M|1516|LOC_Os01g34310|protein_coding|CODING|LOC_Os01g34310.1|3|1) FN_N1-202-3.SNP.1:18920176 chr01:018920176 0 W/18920176-18920176 FN_N1-202-3 Single Base Substitution A-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2754-S.SNP.1:18920304 chr01:018920304 0 W/18920304-18920304 FN2754-S SNP G -> C AC=1;AN=200;BQB=0.158054;DP=4786;DP4=2083,2301,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4406e-07;MQSB=0.870657;RPB=0.997969;SGB=29.4541;VDB=0.525132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.1:18920376 chr01:018920376 0 W/18920376-18920376 FN3711-S SNP C -> T AC=2;AN=190;BQB=0.986182;DP=2477;DP4=1124,1196,10,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13252e-15;MQSB=0.950994;RPB=0.934846;SGB=131.065;VDB=0.219768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.1:18922266 chr01:018922266 0 W/18922266-18922266 FN2180-S SNP A -> G AC=1;AN=190;BQB=0.991739;DP=4715;DP4=2242,2277,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06748e-06;MQSB=0.198427;RPB=0.806529;SGB=39.9877;VDB=0.640271;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.1:18933940 chr01:018933940 0 W/18933940-18933940 FN747-S Single Base Substitution G-A INTRON HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN511-S.SNP.1:18946258 chr01:018946258 0 W/18946258-18946258 FN511-S Single Base Substitution C-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1746-S.SNP.1:18948228 chr01:018948228 0 W/18948228-18948228 FN1746-S SNP C -> T AC=1;AN=188;BQB=0.530304;DP=3146;DP4=1323,1784,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.121742;MQB=0.297882;MQSB=0.0143306;RPB=0.796309;SGB=-34.6243;VDB=0.90439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V120I|260|LOC_Os01g34360|protein_coding|CODING|LOC_Os01g34360.1|2|1) FN1486-S.SNP.1:18952282 chr01:018952282 0 W/18952282-18952282 FN1486-S Single Base Substitution C-T INTRON Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN4021-S.SNP.1:18955485 chr01:018955485 0 W/18955485-18955485 FN4021-S SNP C -> T AC=2;AN=168;BQB=0.763959;DP=2528;DP4=1338,1073,15,20;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0225475;MQB=4.54643e-11;MQSB=0.647921;RPB=0.769214;SGB=110.226;VDB=0.461525;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D309N|1628|LOC_Os01g34374|protein_coding|CODING|LOC_Os01g34374.1|2|1) FN321-S.SNP.1:18967137 chr01:018967137 0 W/18967137-18967137 FN321-S Single Base Substitution A-C INTRON HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN-52.SNP.1:18970269 chr01:018970269 0 W/18970269-18970269 FN-52 Single Base Substitution G-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2311.SNP.1:18974211 chr01:018974211 0 W/18974211-18974211 FN2311 SNP G -> A AC=1;AN=192;BQB=0.978461;DP=4749;DP4=2353,2154,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.27581e-13;MQSB=0.215108;RPB=0.961149;SGB=30.82;VDB=0.936553;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L66|408|LOC_Os01g34400|protein_coding|CODING|LOC_Os01g34400.1|1|1) FN3836-S.SNP.1:18979817 chr01:018979817 0 W/18979817-18979817 FN3836-S SNP T -> A AC=2;AN=190;BQB=0.887367;DP=2520;DP4=1172,1268,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.99685e-16;MQSB=0.932262;RPB=0.853745;SGB=85.8548;VDB=0.853256;EFF=INTRON(MODIFIER||||383|LOC_Os01g34430|protein_coding|CODING|LOC_Os01g34430.1|2|1) FN1547-S.SNP.1:18984717 chr01:018984717 0 W/18984717-18984717 FN1547-S Single Base Substitution G-A INTRON Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN4271-S.SNP.1:18989041 chr01:018989041 0 W/18989041-18989041 FN4271-S SNP T -> C AC=2;AN=170;BQB=0.823861;DP=2449;DP4=1180,1187,12,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15704e-08;MQSB=0.136884;RPB=0.838327;SGB=65.6427;VDB=0.921221;EFF=INTRON(MODIFIER||||383|LOC_Os01g34430|protein_coding|CODING|LOC_Os01g34430.1|11|1) FN714-S.SNP.1:18990612 chr01:018990612 0 W/18990612-18990612 FN714-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g34440 expressed protein SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2455.SNP.1:18997702 chr01:018997702 0 W/18997702-18997702 FN2455 SNP T -> A AC=1;AN=200;BQB=0.85557;DP=4903;DP4=2340,2312,16,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0161126;MQB=5.27648e-11;MQSB=0.277744;RPB=0.519949;SGB=47.7211;VDB=0.135405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:19000566 chr01:019000566 0 W/19000566-19000566 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.184701;DP=5254;DP4=2348,2474,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000190331;MQB=2.53888e-09;MQSB=0.0046568;RPB=0.994539;SGB=-67.5498;VDB=0.631784;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.1:19001358 chr01:019001358 0 W/19001358-19001358 FN1317-S Single Base Substitution G-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2730-S.SNP.1:19006648 chr01:019006648 0 W/19006648-19006648 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.99568;DP=4405;DP4=2096,2065,2,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000232293;MQSB=0.995792;RPB=0.921908;SGB=22.0312;VDB=0.954032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G408S|521|LOC_Os01g34470|protein_coding|CODING|LOC_Os01g34470.1|1|1) FN2709-S.SNP.1:19014604 chr01:019014604 0 W/19014604-19014604 FN2709-S SNP T -> A AC=2;AN=200;BQB=0.852635;DP=5079;DP4=2433,2421,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.83988e-22;MQSB=0.871758;RPB=0.978362;SGB=126.794;VDB=0.199932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.1:19019773 chr01:019019773 0 W/19019773-19019773 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.969822;DP=2747;DP4=1365,1306,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.93765e-06;MQSB=0.121707;RPB=0.968401;SGB=44.5415;VDB=0.932962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C260Y|999|LOC_Os01g34490|protein_coding|CODING|LOC_Os01g34490.1|1|1) FN3759-S.SNP.1:19022734 chr01:019022734 0 W/19022734-19022734 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.940041;DP=2987;DP4=1503,1386,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52984e-07;MQSB=0.887941;RPB=0.999683;SGB=43.2083;VDB=0.517146;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V104|165|LOC_Os01g34500|protein_coding|CODING|LOC_Os01g34500.1|2|1) FN2721-S.SNP.1:19023763 chr01:019023763 0 W/19023763-19023763 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.807546;DP=4510;DP4=2307,1969,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59701e-13;MQSB=0.999909;RPB=0.81043;SGB=45.1159;VDB=0.512361;EFF=INTRON(MODIFIER||||165|LOC_Os01g34500|protein_coding|CODING|LOC_Os01g34500.1|1|1) FN2353.SNP.1:19026780 chr01:019026780 0 W/19026780-19026780 FN2353 SNP G -> A AC=1;AN=192;BQB=0.928929;DP=5127;DP4=2387,2442,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.74469e-12;MQSB=0.726925;RPB=0.759183;SGB=16.7409;VDB=0.992247;EFF=INTRON(MODIFIER||||70|LOC_Os01g34510|protein_coding|CODING|LOC_Os01g34510.1|1|1) FN2315.SNP.1:19027471 chr01:019027471 0 W/19027471-19027471 FN2315 SNP C -> T AC=1;AN=192;BQB=0.899498;DP=5386;DP4=2473,2599,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000185667;MQB=1.89922e-14;MQSB=0.852723;RPB=0.15209;SGB=16.7409;VDB=0.662686;EFF=INTRON(MODIFIER||||70|LOC_Os01g34510|protein_coding|CODING|LOC_Os01g34510.1|1|1) FN2660-S.SNP.1:19027873 chr01:019027873 0 W/19027873-19027873 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.761931;DP=5114;DP4=2434,2396,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69855e-13;MQSB=0.999883;RPB=0.552593;SGB=91.1059;VDB=0.649445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.1:19034991 chr01:019034991 0 W/19034991-19034991 FN2390 SNP A -> C AC=1;AN=200;BQB=0.912883;DP=4650;DP4=2193,1968,19,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29444e-11;MQSB=0.853635;RPB=0.402662;SGB=19.1209;VDB=0.402995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D287E|732|LOC_Os01g34530|protein_coding|CODING|LOC_Os01g34530.1|3|1) FN2684-S.SNP.1:19036408 chr01:019036408 0 W/19036408-19036408 FN2684-S SNP C -> T AC=2;AN=200;BQB=0.961509;DP=4355;DP4=2007,2046,16,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.41332e-26;MQSB=0.489027;RPB=0.953018;SGB=99.8245;VDB=0.118111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.1:19038878 chr01:019038878 0 W/19038878-19038878 FN3948-S SNP T -> A AC=1;AN=168;BQB=0.994611;DP=2853;DP4=1374,1382,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39937e-13;MQSB=0.82754;RPB=0.779991;SGB=44.0621;VDB=0.296962;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.1:19038878 chr01:019038878 0 W/19038878-19038878 FN458-S Single Base Substitution T-A INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN1763-S.SNP.1:19038879 chr01:019038879 0 W/19038879-19038879 FN1763-S SNP A -> T AC=2;AN=188;BQB=0.739329;DP=4308;DP4=2032,2209,18,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.89983e-12;MQSB=0.979787;RPB=0.991124;SGB=-41.0182;VDB=0.49323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.1:19038879 chr01:019038879 0 W/19038879-19038879 FN3528-S SNP A -> T AC=2;AN=188;BQB=0.938273;DP=3000;DP4=1364,1534,22,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.71309e-22;MQSB=0.957586;RPB=0.998808;SGB=180.734;VDB=0.169503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.1:19039256 chr01:019039256 0 W/19039256-19039256 FN1410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1006-S.SNP.1:19042002 chr01:019042002 0 W/19042002-19042002 FN1006-S Single Base Substitution A-G INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2661-S.SNP.1:19047915 chr01:019047915 0 W/19047915-19047915 FN2661-S SNP A -> G AC=1;AN=200;BQB=0.593727;DP=4798;DP4=2376,2161,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83489e-09;MQSB=0.999946;RPB=0.675292;SGB=-76.121;VDB=0.910749;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.1:19048234 chr01:019048234 0 W/19048234-19048234 FN3341-S SNP A -> G AC=1;AN=184;BQB=0.704632;DP=3267;DP4=1387,1768,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75828e-10;MQSB=0.999607;RPB=0.672987;SGB=84.9167;VDB=0.543357;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.1:19050131 chr01:019050131 0 W/19050131-19050131 FN-328 Single Base Substitution A-G INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1660-S.SNP.1:19062047 chr01:019062047 0 W/19062047-19062047 FN1660-S Single Base Substitution T-C INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2677-S.SNP.1:19064834 chr01:019064834 0 W/19064834-19064834 FN2677-S SNP G -> C AC=2;AN=200;BQB=0.894063;DP=4716;DP4=2130,2339,25,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00572519;MQB=2.56645e-23;MQSB=0.484625;RPB=0.923443;SGB=206.235;VDB=0.721013;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.1:19069101 chr01:019069101 0 W/19069101-19069101 FN318-S Single Base Substitution C-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3572-S.SNP.1:19074903 chr01:019074903 0 W/19074903-19074903 FN3572-S SNP G -> C AC=1;AN=188;BQB=0.941293;DP=2800;DP4=1317,1438,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000357143;MQB=3.04316e-07;MQSB=0.974703;RPB=0.795707;SGB=53.5223;VDB=0.518915;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.1:19082203 chr01:019082203 0 W/19082203-19082203 FN818-S Single Base Substitution G-A INTRON HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN1190-S.SNP.1:19095241 chr01:019095241 0 W/19095241-19095241 FN1190-S Single Base Substitution T-C INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2754-S.SNP.1:19098605 chr01:019098605 0 W/19098605-19098605 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.681343;DP=5199;DP4=2501,2440,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23861e-17;MQSB=0.97394;RPB=0.926203;SGB=123.342;VDB=0.955026;EFF=INTRON(MODIFIER||||674|LOC_Os01g34630|protein_coding|CODING|LOC_Os01g34630.1|4|1) FN4230-S.SNP.1:19101117 chr01:019101117 0 W/19101117-19101117 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.999986;DP=2600;DP4=1233,1256,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.74277e-07;MQSB=0.999644;RPB=0.996372;SGB=34.878;VDB=0.18033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1154-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN1154-S Single Base Substitution G-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1405-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN1405-S Single Base Substitution G-A INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2232-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN2232-S SNP G -> A AC=2;AN=190;BQB=0.56916;DP=4726;DP4=2184,2147,14,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000211595;MQB=1.28429e-20;MQSB=0.913762;RPB=0.108845;SGB=90.0605;VDB=0.238662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN2381 SNP G -> A AC=1;AN=192;BQB=0.980567;DP=4610;DP4=2207,2083,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.17472e-15;MQSB=0.838671;RPB=0.618317;SGB=54.5574;VDB=0.616481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN3631-S SNP G -> A AC=2;AN=190;BQB=0.982698;DP=2489;DP4=1198,1186,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.19693e-11;MQSB=0.998306;RPB=0.999082;SGB=68.0854;VDB=0.673923;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN771-S Single Base Substitution G-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN866-S.SNP.1:19106605 chr01:019106605 0 W/19106605-19106605 FN866-S Single Base Substitution G-A INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN-146.SNP.1:19121911 chr01:019121911 0 W/19121911-19121911 FN-146 Single Base Substitution A-T INTRON HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN4230-S.SNP.1:19128091 chr01:019128091 0 W/19128091-19128091 FN4230-S SNP A -> G AC=2;AN=170;BQB=0.985871;DP=2385;DP4=1223,1045,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.41492e-14;MQSB=0.926376;RPB=0.889162;SGB=41.8678;VDB=0.119182;EFF=INTRON(MODIFIER||||416|LOC_Os01g34680|protein_coding|CODING|LOC_Os01g34680.1|1|1) FN443-S.SNP.1:19128884 chr01:019128884 0 W/19128884-19128884 FN443-S Single Base Substitution G-A INTRON HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN660-S.SNP.1:19128884 chr01:019128884 0 W/19128884-19128884 FN660-S Single Base Substitution G-A INTRON HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1113-S.SNP.1:19129183 chr01:019129183 0 W/19129183-19129183 FN1113-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g34680 expressed protein SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN323-S.SNP.1:19134828 chr01:019134828 0 W/19134828-19134828 FN323-S Single Base Substitution A-C INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2690-S.SNP.1:19135234 chr01:019135234 0 W/19135234-19135234 FN2690-S SNP C -> T AC=1;AN=200;BQB=0.894552;DP=5058;DP4=2479,2281,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.91487e-07;MQSB=0.956437;RPB=0.885247;SGB=21.6694;VDB=0.898372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.1:19145055 chr01:019145055 0 W/19145055-19145055 FN1018-S Single Base Substitution G-T INTRON HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2651-S.SNP.1:19151169 chr01:019151169 0 W/19151169-19151169 FN2651-S SNP A -> T AC=1;AN=200;BQB=0.852166;DP=4915;DP4=2455,2259,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77724e-10;MQSB=0.859738;RPB=0.671192;SGB=37.3004;VDB=0.0739848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.1:19153685 chr01:019153685 0 W/19153685-19153685 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.923911;DP=3276;DP4=1762,1465,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.32354e-09;MQSB=0.938492;RPB=0.985795;SGB=29.4772;VDB=0.1893;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q315*|620|LOC_Os01g34720|protein_coding|CODING|LOC_Os01g34720.1|1|1);LOF=(LOC_Os01g34720|LOC_Os01g34720|1|1.00);NMD=(LOC_Os01g34720|LOC_Os01g34720|1|1.00) FN788-S.SNP.1:19155951 chr01:019155951 0 W/19155951-19155951 FN788-S Single Base Substitution C-T INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN513-S.SNP.1:19158079 chr01:019158079 0 W/19158079-19158079 FN513-S Single Base Substitution A-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3938-S.SNP.1:19162895 chr01:019162895 0 W/19162895-19162895 FN3938-S SNP G -> A AC=1;AN=158;BQB=0.552636;DP=2356;DP4=1143,1135,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.79382e-07;MQSB=0.97457;RPB=0.311881;SGB=40.8124;VDB=0.382639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E862K|1055|LOC_Os01g34730|protein_coding|CODING|LOC_Os01g34730.1|7|1) FN2614-S.SNP.1:19167117 chr01:019167117 0 W/19167117-19167117 FN2614-S SNP A -> T AC=1;AN=198;BQB=0.851901;DP=4203;DP4=2041,1898,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23682e-12;MQSB=0.90025;RPB=0.900904;SGB=47.5102;VDB=0.46132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y128F|194|LOC_Os01g34750|protein_coding|CODING|LOC_Os01g34750.1|2|1) FN4158-S.SNP.1:19167156 chr01:019167156 0 W/19167156-19167156 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.818388;DP=2706;DP4=1324,1307,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.60705e-10;MQSB=0.785036;RPB=0.629128;SGB=61.2001;VDB=0.474291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G141D|194|LOC_Os01g34750|protein_coding|CODING|LOC_Os01g34750.1|2|1) FN4158-S.SNP.1:19167157 chr01:019167157 0 W/19167157-19167157 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.893076;DP=2700;DP4=1293,1295,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.44332e-10;MQSB=0.658566;RPB=0.855568;SGB=27.2119;VDB=0.627798;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G141|194|LOC_Os01g34750|protein_coding|CODING|LOC_Os01g34750.1|2|1) FN2696-S.SNP.1:19177014 chr01:019177014 0 W/19177014-19177014 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.947244;DP=4061;DP4=2601,1080,9,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00443241;MQB=0.00721128;MQSB=3.75204e-08;RPB=0.968232;SGB=-13.7154;VDB=0.627798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.1:19177771 chr01:019177771 0 W/19177771-19177771 FN2340 SNP C -> A AC=1;AN=192;BQB=0.644656;DP=4889;DP4=2192,2395,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.28323e-07;MQSB=0.9618;RPB=0.937021;SGB=43.3444;VDB=0.837452;EFF=UTR_3_PRIME(MODIFIER||1090||446|LOC_Os01g34780|protein_coding|CODING|LOC_Os01g34780.1|14|1),UTR_3_PRIME(MODIFIER||1090||446|LOC_Os01g34780|protein_coding|CODING|LOC_Os01g34780.2|13|1) FN1001-S.SNP.1:19178589 chr01:019178589 0 W/19178589-19178589 FN1001-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN-274.SNP.1:19201939 chr01:019201939 0 W/19201939-19201939 FN-274 Single Base Substitution T-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN2622-S.SNP.1:19202026 chr01:019202026 0 W/19202026-19202026 FN2622-S SNP C -> G AC=1;AN=200;BQB=0.720896;DP=5061;DP4=2827,1951,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.41593e-19;MQSB=0.638573;RPB=0.644889;SGB=108.768;VDB=0.535988;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.1:19202459 chr01:019202459 0 W/19202459-19202459 FN908-S Single Base Substitution C-A INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1022-S.SNP.1:19204175 chr01:019204175 0 W/19204175-19204175 FN1022-S Single Base Substitution A-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN868-S.SNP.1:19205191 chr01:019205191 0 W/19205191-19205191 FN868-S Single Base Substitution T-C INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1627-S.SNP.1:19210006 chr01:019210006 0 W/19210006-19210006 FN1627-S Single Base Substitution C-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2784-S.SNP.1:19211660 chr01:019211660 0 W/19211660-19211660 FN2784-S SNP G -> A AC=1;AN=190;BQB=0.876723;DP=3636;DP4=1744,1664,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00495049;MQB=4.21086e-05;MQSB=0.853331;RPB=0.4333;SGB=55.2955;VDB=0.265482;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R40|1093|LOC_Os01g34800|protein_coding|CODING|LOC_Os01g34800.1|1|1) FN488-S.SNP.1:19211662 chr01:019211662 0 W/19211662-19211662 FN488-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g34800 retrotransposon protein, putative, unclassified, expressed SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2280-S.SNP.1:19212925 chr01:019212925 0 W/19212925-19212925 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.715683;DP=3752;DP4=1553,1904,5,16;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00373134;MQB=0.476885;MQSB=0.0016506;RPB=0.973193;SGB=90.0802;VDB=0.101881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A462V|1093|LOC_Os01g34800|protein_coding|CODING|LOC_Os01g34800.1|1|1) FN-152.SNP.1:19216333 chr01:019216333 0 W/19216333-19216333 FN-152 Single Base Substitution G-A INTERGENIC HOMO SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN_829-2-5.SNP.1:19254725 chr01:019254725 0 W/19254725-19254725 FN_829-2-5 Single Base Substitution T-C HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN554-S.SNP.1:19258586 chr01:019258586 0 W/19258586-19258586 FN554-S Single Base Substitution C-A STOP_GAINED HET LOC_Os01g34880 callose synthase, putative, expressed SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN367-S.SNP.1:19259489 chr01:019259489 0 W/19259489-19259489 FN367-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g34880 callose synthase, putative, expressed SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2566-S.SNP.1:19264206 chr01:019264206 0 W/19264206-19264206 FN2566-S SNP C -> T AC=1;AN=198;BQB=0.812872;DP=4378;DP4=1911,2180,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.60935e-05;MQSB=0.965718;RPB=0.882754;SGB=-17.4065;VDB=0.963343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.1:19283136 chr01:019283136 0 W/19283136-19283136 FN2407 SNP G -> A AC=1;AN=200;BQB=0.761003;DP=4889;DP4=2449,2169,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000409082;MQB=4.05003e-05;MQSB=0.982634;RPB=0.977687;SGB=13.8539;VDB=0.3365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.1:19283800 chr01:019283800 0 W/19283800-19283800 FN2765-S SNP T -> C AC=1;AN=198;BQB=0.811412;DP=4406;DP4=2284,1954,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.73079e-10;MQSB=0.558888;RPB=0.911238;SGB=72.5245;VDB=0.483596;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.1:19283913 chr01:019283913 0 W/19283913-19283913 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.0822507;DP=3969;DP4=1868,1938,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.38712e-09;MQSB=0.896662;RPB=0.871201;SGB=6.15916;VDB=0.68766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.1:19287164 chr01:019287164 0 W/19287164-19287164 FN2403 SNP G -> A AC=1;AN=200;BQB=0.15624;DP=4621;DP4=2321,2075,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04811e-15;MQSB=0.963682;RPB=0.597405;SGB=23.9365;VDB=0.831048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.1:19287638 chr01:019287638 0 W/19287638-19287638 FN2403 SNP T -> C AC=1;AN=200;BQB=0.998129;DP=5038;DP4=2323,2384,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35674e-06;MQSB=0.706942;RPB=0.271766;SGB=49.6594;VDB=0.0512963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.1:19297821 chr01:019297821 0 W/19297821-19297821 FN2375 SNP T -> A AC=1;AN=192;BQB=0.62481;DP=4553;DP4=2155,2153,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.48737e-09;MQSB=0.192501;RPB=0.925083;SGB=46.9087;VDB=0.685251;EFF=INTRON(MODIFIER||||827|LOC_Os01g34920|protein_coding|CODING|LOC_Os01g34920.1|12|1) FN980-S.SNP.1:19298148 chr01:019298148 0 W/19298148-19298148 FN980-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g34920 beta-galactosidase precursor, putative, expressed SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2089-S.SNP.1:19323682 chr01:019323682 0 W/19323682-19323682 FN2089-S SNP T -> C AC=1;AN=168;BQB=0.540656;DP=3410;DP4=1708,1668,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5868e-14;MQSB=0.908669;RPB=0.274869;SGB=72.4869;VDB=0.907668;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.1:19324357 chr01:019324357 0 W/19324357-19324357 FN1020-S Single Base Substitution C-T INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN926-S.SNP.1:19324795 chr01:019324795 0 W/19324795-19324795 FN926-S Single Base Substitution A-G INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3832-S.SNP.1:19324826 chr01:019324826 0 W/19324826-19324826 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.795331;DP=2739;DP4=1248,1395,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.36711e-12;MQSB=0.670328;RPB=0.797091;SGB=38.983;VDB=0.336796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A119V|122|LOC_Os01g34940|protein_coding|CODING|LOC_Os01g34940.1|2|1) FN818-S.SNP.1:19335458 chr01:019335458 0 W/19335458-19335458 FN818-S Single Base Substitution A-T INTERGENIC HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN2130-S.SNP.1:19337664 chr01:019337664 0 W/19337664-19337664 FN2130-S SNP T -> C AC=1;AN=168;BQB=1.23916e-05;DP=3755;DP4=1434,2270,10,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.2349e-07;MQSB=0.992325;RPB=0.723644;SGB=-211.183;VDB=0.702428;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.1:19340113 chr01:019340113 0 W/19340113-19340113 FN624-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g34950 expressed protein SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN3439-S.SNP.1:19344968 chr01:019344968 0 W/19344968-19344968 FN3439-S SNP G -> A AC=2;AN=184;BQB=0.999964;DP=2817;DP4=1408,1328,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.5263e-12;MQSB=0.88056;RPB=0.351326;SGB=84.9167;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:19348851 chr01:019348851 0 W/19348851-19348851 FN2235-S SNP C -> T AC=1;AN=190;BQB=0.520916;DP=4087;DP4=1785,2030,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02588e-08;MQSB=0.0501057;RPB=0.00756593;SGB=76.4186;VDB=0.0781894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.1:19359100 chr01:019359100 0 W/19359100-19359100 FN2373 SNP G -> A AC=2;AN=192;BQB=0.23269;DP=4556;DP4=2102,2127,21,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.84605e-24;MQSB=0.293991;RPB=0.996856;SGB=157.404;VDB=0.653331;EFF=UTR_3_PRIME(MODIFIER||742||671|LOC_Os01g34970|protein_coding|CODING|LOC_Os01g34970.2|10|1),UTR_3_PRIME(MODIFIER||742||843|LOC_Os01g34970|protein_coding|CODING|LOC_Os01g34970.1|12|1) FN1455-S.SNP.1:19363112 chr01:019363112 0 W/19363112-19363112 FN1455-S Single Base Substitution G-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3580-S.SNP.1:19378059 chr01:019378059 0 W/19378059-19378059 FN3580-S SNP A -> T AC=1;AN=188;BQB=0.439381;DP=3068;DP4=1244,1712,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000513929;MQSB=0.582927;RPB=0.785621;SGB=28.8977;VDB=0.239887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.1:19381213 chr01:019381213 0 W/19381213-19381213 FN1211-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g35030 MDR-like ABC transporter, putative, expressed SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1338-S.SNP.1:19389009 chr01:019389009 0 W/19389009-19389009 FN1338-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1073-S.SNP.1:19402636 chr01:019402636 0 W/19402636-19402636 FN1073-S Single Base Substitution C-A INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN946-S.SNP.1:19412255 chr01:019412255 0 W/19412255-19412255 FN946-S Single Base Substitution C-A INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN1374-S.SNP.1:19412602 chr01:019412602 0 W/19412602-19412602 FN1374-S Single Base Substitution G-A INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1082-S.SNP.1:19416137 chr01:019416137 0 W/19416137-19416137 FN1082-S Single Base Substitution C-A INTRON HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN920-S.SNP.1:19418803 chr01:019418803 0 W/19418803-19418803 FN920-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g35070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3694-S.SNP.1:19419189 chr01:019419189 0 W/19419189-19419189 FN3694-S SNP A -> C AC=2;AN=190;BQB=0.74265;DP=2956;DP4=1451,1299,12,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.31203e-11;MQSB=0.988239;RPB=0.88521;SGB=80.9724;VDB=0.289471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V577G|1390|LOC_Os01g35070|protein_coding|CODING|LOC_Os01g35070.1|2|1) FN3694-S.SNP.1:19419193 chr01:019419193 0 W/19419193-19419193 FN3694-S SNP G -> A AC=2;AN=190;BQB=0.731698;DP=2978;DP4=1508,1349,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.48776e-11;MQSB=0.909193;RPB=0.750933;SGB=80.9724;VDB=0.580503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H576Y|1390|LOC_Os01g35070|protein_coding|CODING|LOC_Os01g35070.1|2|1) FN723-S.SNP.1:19419318 chr01:019419318 0 W/19419318-19419318 FN723-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g35070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1719-S.SNP.1:19420206 chr01:019420206 0 W/19420206-19420206 FN1719-S SNP T -> A AC=1;AN=188;BQB=4.97121e-06;DP=2572;DP4=1259,1266,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00155521;MQB=0.985746;MQSB=0.728072;RPB=0.951436;SGB=-83.9838;VDB=0.939904;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N238I|1390|LOC_Os01g35070|protein_coding|CODING|LOC_Os01g35070.1|2|1) FN2593-S.SNP.1:19422957 chr01:019422957 0 W/19422957-19422957 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.800108;DP=4229;DP4=2056,1959,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0803973;MQB=0.128952;MQSB=0.0036561;RPB=0.445673;SGB=97.671;VDB=0.766205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.1:19423741 chr01:019423741 0 W/19423741-19423741 FN1636-S Single Base Substitution T-G INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN4082-S.SNP.1:19428858 chr01:019428858 0 W/19428858-19428858 FN4082-S SNP T -> G AC=2;AN=182;BQB=0.804834;DP=3156;DP4=1549,1513,20,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.74655e-26;MQSB=0.999514;RPB=0.267978;SGB=144.464;VDB=0.463382;EFF=INTRON(MODIFIER||||1319|LOC_Os01g35090|protein_coding|CODING|LOC_Os01g35090.1|6|1) FN1577-S.SNP.1:19429172 chr01:019429172 0 W/19429172-19429172 FN1577-S Single Base Substitution C-T INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3493-S.SNP.1:19432460 chr01:019432460 0 W/19432460-19432460 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.997752;DP=3178;DP4=1538,1560,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27906e-08;MQSB=0.973653;RPB=0.970998;SGB=62.3078;VDB=0.488567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A104V|1319|LOC_Os01g35090|protein_coding|CODING|LOC_Os01g35090.1|1|1) FN2538-S.SNP.1:19444093 chr01:019444093 0 W/19444093-19444093 FN2538-S SNP C -> T AC=1;AN=198;BQB=0.936113;DP=4826;DP4=2421,2087,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.108164;MQB=0.991425;MQSB=0.609145;RPB=0.176925;SGB=104.69;VDB=0.67609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S1228N|1498|LOC_Os01g35140|protein_coding|CODING|LOC_Os01g35140.1|2|1) FN2751-S.SNP.1:19444377 chr01:019444377 0 W/19444377-19444377 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.961173;DP=5387;DP4=2427,2688,4,6;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0655281;MQB=0.995933;MQSB=5.7328e-06;RPB=0.996463;SGB=40.4492;VDB=0.778152;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1133|1498|LOC_Os01g35140|protein_coding|CODING|LOC_Os01g35140.1|2|1) FN929-S.SNP.1:19445628 chr01:019445628 0 W/19445628-19445628 FN929-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g35140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. W481-5-1.SNP.1:19448605 chr01:019448605 0 W/19448605-19448605 W481-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2795-S.SNP.1:19448887 chr01:019448887 0 W/19448887-19448887 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.972498;DP=4397;DP4=2054,2072,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0234251;MQB=0.836985;MQSB=5.73414e-13;RPB=0.94361;SGB=52.7004;VDB=0.476618;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.1:19451307 chr01:019451307 0 W/19451307-19451307 FN895-S Single Base Substitution G-T INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2226-S.SNP.1:19466582 chr01:019466582 0 W/19466582-19466582 FN2226-S SNP T -> G AC=1;AN=190;BQB=0.581937;DP=2271;DP4=409,1498,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.92891e-08;MQSB=2.12336e-11;RPB=0.387051;SGB=10.3266;VDB=0.597371;EFF=UTR_5_PRIME(MODIFIER||281||189|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.3|1|1),INTRON(MODIFIER||||286|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.1|1|1),INTRON(MODIFIER||||285|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.2|1|1) FN632-S.SNP.1:19467332 chr01:019467332 0 W/19467332-19467332 FN632-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2530-S.SNP.1:19467871 chr01:019467871 0 W/19467871-19467871 FN2530-S SNP T -> G AC=1;AN=198;BQB=0.977184;DP=4178;DP4=1855,2021,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.05563e-15;MQSB=0.990462;RPB=0.311453;SGB=47.5102;VDB=0.050159;EFF=INTRON(MODIFIER||||286|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.1|7|1),INTRON(MODIFIER||||285|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.2|7|1),INTRON(MODIFIER||||189|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.3|6|1) FN2330.SNP.1:19469007 chr01:019469007 0 W/19469007-19469007 FN2330 SNP C -> A AC=1;AN=192;BQB=0.668035;DP=4966;DP4=2301,2376,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.85908e-12;MQSB=0.818637;RPB=0.223331;SGB=34.0426;VDB=0.712723;EFF=UTR_3_PRIME(MODIFIER||771||189|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.3|7|1),UTR_3_PRIME(MODIFIER||771||286|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.1|9|1),UTR_3_PRIME(MODIFIER||771||285|LOC_Os01g35170|protein_coding|CODING|LOC_Os01g35170.2|9|1) FN2531-S.SNP.1:19472528 chr01:019472528 0 W/19472528-19472528 FN2531-S SNP G -> T AC=1;AN=198;BQB=0.712186;DP=4001;DP4=2032,1758,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000249938;MQB=2.14021e-10;MQSB=0.991221;RPB=0.973403;SGB=54.5295;VDB=0.369619;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T273|446|LOC_Os01g35184|protein_coding|CODING|LOC_Os01g35184.1|9|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T273|446|LOC_Os01g35184|protein_coding|CODING|LOC_Os01g35184.2|9|1) FN972-S.SNP.1:19476134 chr01:019476134 0 W/19476134-19476134 FN972-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g35184 CAMK_KIN1/SNF1/Nim1_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN987-S.SNP.1:19480397 chr01:019480397 0 W/19480397-19480397 FN987-S Single Base Substitution G-A INTERGENIC HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN786-S.SNP.1:19493616 chr01:019493616 0 W/19493616-19493616 FN786-S Single Base Substitution T-C INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2676-S.SNP.1:19495194 chr01:019495194 0 W/19495194-19495194 FN2676-S SNP G -> A AC=2;AN=200;BQB=0.50001;DP=5106;DP4=2478,2329,30,20;HOB=0.0198;ICB=0.495051;MQ=28;MQ0F=0.0955738;MQB=0.0663509;MQSB=2.14996e-21;RPB=0.582787;SGB=115.456;VDB=0.563472;EFF=INTRON(MODIFIER||||1669|LOC_Os01g35220|protein_coding|CODING|LOC_Os01g35220.1|10|1) FN3549-S.SNP.1:19497181 chr01:019497181 0 W/19497181-19497181 FN3549-S SNP G -> T AC=2;AN=188;BQB=0.97133;DP=2869;DP4=1451,1352,9,14;HOB=0.0210502;ICB=0.494738;MQ=25;MQ0F=0.186476;MQB=0.748773;MQSB=0.00398008;RPB=0.984314;SGB=98.9552;VDB=0.308445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P1305Q|1669|LOC_Os01g35220|protein_coding|CODING|LOC_Os01g35220.1|6|1) FN1509-S.SNP.1:19502369 chr01:019502369 0 W/19502369-19502369 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1472-S.SNP.1:19502424 chr01:019502424 0 W/19502424-19502424 FN1472-S Single Base Substitution G-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1371-S.SNP.1:19503162 chr01:019503162 0 W/19503162-19503162 FN1371-S Single Base Substitution G-T INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN1228-S.SNP.1:19504665 chr01:019504665 0 W/19504665-19504665 FN1228-S Single Base Substitution C-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3323-S.SNP.1:19518680 chr01:019518680 0 W/19518680-19518680 FN3323-S SNP C -> A AC=2;AN=184;BQB=0.93061;DP=2564;DP4=952,1523,2,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.43006e-10;MQSB=0.756159;RPB=0.752724;SGB=75.8731;VDB=0.0713685;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W805L|1445|LOC_Os01g35254|protein_coding|CODING|LOC_Os01g35254.1|8|1) FN813-S.SNP.1:19518787 chr01:019518787 0 W/19518787-19518787 FN813-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g35254 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN4230-S.SNP.1:19521691 chr01:019521691 0 W/19521691-19521691 FN4230-S SNP A -> T AC=2;AN=170;BQB=0.497252;DP=2407;DP4=1020,1242,11,17;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.00290818;MQB=1.85668e-05;MQSB=0.00177961;RPB=0.547038;SGB=118.955;VDB=0.916816;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G195|1445|LOC_Os01g35254|protein_coding|CODING|LOC_Os01g35254.1|2|1) FN681-S.SNP.1:19523105 chr01:019523105 0 W/19523105-19523105 FN681-S Single Base Substitution A-T INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2664-S.SNP.1:19523791 chr01:019523791 0 W/19523791-19523791 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.849973;DP=4997;DP4=2329,2453,12,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0258155;MQB=0.0022782;MQSB=0.000146628;RPB=0.528389;SGB=54.6902;VDB=0.337694;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.1:19527423 chr01:019527423 0 W/19527423-19527423 FN795-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g35270 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN3594-S.SNP.1:19528233 chr01:019528233 0 W/19528233-19528233 FN3594-S SNP A -> G AC=2;AN=188;BQB=0.511678;DP=1299;DP4=94,1143,0,12;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0669746;MQB=0.31812;MQSB=3.8709e-17;RPB=0.550585;SGB=48.979;VDB=0.374989;EFF=INTRON(MODIFIER||||271|LOC_Os01g35270|protein_coding|CODING|LOC_Os01g35270.1|1|1) FN3964-S.SNP.1:19529843 chr01:019529843 0 W/19529843-19529843 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.746728;DP=2490;DP4=1773,606,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0281125;MQB=0.697378;MQSB=9.23459e-32;RPB=0.958394;SGB=34.748;VDB=0.966579;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.1:19532389 chr01:019532389 0 W/19532389-19532389 FN4190-S SNP A -> G AC=2;AN=170;BQB=0.775539;DP=2582;DP4=1351,1121,14,9;HOB=0.0232526;ICB=0.494188;MQ=33;MQ0F=0.0948877;MQB=0.976343;MQSB=2.04863e-30;RPB=0.899652;SGB=96.7413;VDB=0.662217;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P503|1110|LOC_Os01g35280|protein_coding|CODING|LOC_Os01g35280.1|1|1) FN_829-2-5.SNP.1:19535223 chr01:019535223 0 W/19535223-19535223 FN_829-2-5 Single Base Substitution G-A HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN495-S.SNP.1:19536118 chr01:019536118 0 W/19536118-19536118 FN495-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN2533-S.SNP.1:19537433 chr01:019537433 0 W/19537433-19537433 FN2533-S SNP G -> T AC=1;AN=198;BQB=0.924666;DP=4160;DP4=2000,1954,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000480769;MQB=3.68674e-06;MQSB=0.969036;RPB=0.822553;SGB=16.3688;VDB=0.699679;EFF=INTRON(MODIFIER||||1200|LOC_Os01g35290|protein_coding|CODING|LOC_Os01g35290.1|1|1) FN4311-S.SNP.1:19537632 chr01:019537632 0 W/19537632-19537632 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.99719;DP=2532;DP4=1271,1206,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.0106635;MQB=0.000424833;MQSB=0.0157875;RPB=0.999988;SGB=30.1021;VDB=0.308129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S693F|1200|LOC_Os01g35290|protein_coding|CODING|LOC_Os01g35290.1|2|1) FN3824-S.SNP.1:19544647 chr01:019544647 0 W/19544647-19544647 FN3824-S SNP T -> C AC=1;AN=190;BQB=0.546553;DP=2548;DP4=1242,1186,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10327e-05;MQSB=0.993297;RPB=0.987283;SGB=15.9981;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.1:19546562 chr01:019546562 0 W/19546562-19546562 FN1060-S Single Base Substitution C-G INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3427-S.SNP.1:19552881 chr01:019552881 0 W/19552881-19552881 FN3427-S SNP T -> A AC=1;AN=184;BQB=0.664452;DP=2999;DP4=1511,1421,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0699e-05;MQSB=0.9999;RPB=0.900056;SGB=48.7425;VDB=0.925977;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:19569117 chr01:019569117 0 W/19569117-19569117 FN951-S Single Base Substitution G-A INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN866-S.SNP.1:19576746 chr01:019576746 0 W/19576746-19576746 FN866-S Single Base Substitution T-C INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3536-S.SNP.1:19577121 chr01:019577121 0 W/19577121-19577121 FN3536-S SNP C -> G AC=2;AN=188;BQB=0.990435;DP=2956;DP4=1494,1398,10,14;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00135318;MQB=7.99155e-12;MQSB=0.428482;RPB=0.99667;SGB=103.498;VDB=0.593899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.1:19577748 chr01:019577748 0 W/19577748-19577748 FN1112-S Single Base Substitution C-T INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1112-S.SNP.1:19577749 chr01:019577749 0 W/19577749-19577749 FN1112-S Single Base Substitution C-T INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN-97.SNP.1:19592100 chr01:019592100 0 W/19592100-19592100 FN-97 Single Base Substitution G-A INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3718-S.SNP.1:19598365 chr01:019598365 0 W/19598365-19598365 FN3718-S SNP G -> T AC=2;AN=190;BQB=0.643192;DP=3227;DP4=1344,1759,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.67825e-11;MQSB=0.980716;RPB=0.542141;SGB=71.6393;VDB=0.284925;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.1:19599476 chr01:019599476 0 W/19599476-19599476 FN239-S Single Base Substitution T-C INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN624-S.SNP.1:19601758 chr01:019601758 0 W/19601758-19601758 FN624-S Single Base Substitution T-C INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN478-S.SNP.1:19603677 chr01:019603677 0 W/19603677-19603677 FN478-S Single Base Substitution T-C INTRON HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1099-S.SNP.1:19605223 chr01:019605223 0 W/19605223-19605223 FN1099-S Single Base Substitution C-A INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2410.SNP.1:19608010 chr01:019608010 0 W/19608010-19608010 FN2410 SNP C -> T AC=1;AN=200;BQB=0.944071;DP=2280;DP4=1326,716,8,4;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0565789;MQB=0.306116;MQSB=1.61983e-05;RPB=0.576647;SGB=49.6594;VDB=0.848205;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.1:19608844 chr01:019608844 0 W/19608844-19608844 FN3364-S SNP A -> G AC=2;AN=184;BQB=0.777674;DP=3097;DP4=1354,1563,17,11;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0148531;MQB=0.000421911;MQSB=0.014368;RPB=0.932236;SGB=23.542;VDB=0.250935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.1:19614818 chr01:019614818 0 W/19614818-19614818 FN2653-S SNP C -> G AC=1;AN=200;BQB=0.941287;DP=9585;DP4=4445,4598,15,13;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.116328;MQB=0.992572;MQSB=0;RPB=0.99657;SGB=25.5416;VDB=0.225483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.1:19616858 chr01:019616858 0 W/19616858-19616858 FN1668-S SNP G -> A AC=2;AN=188;BQB=0.00169462;DP=1649;DP4=815,753,13,8;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.03396;MQB=0.00090126;MQSB=0.160416;RPB=0.699484;SGB=-88.8972;VDB=0.593303;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A174T|1488|LOC_Os01g35450|protein_coding|CODING|LOC_Os01g35450.1|2|1) FN-285.SNP.1:19626536 chr01:019626536 0 W/19626536-19626536 FN-285 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g35470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.1:19626536 chr01:019626536 0 W/19626536-19626536 FN1278-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g35470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. W463-2-1.SNP.1:19640305 chr01:019640305 0 W/19640305-19640305 W463-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2689-S.SNP.1:19641656 chr01:019641656 0 W/19641656-19641656 FN2689-S SNP A -> G AC=1;AN=200;BQB=0.903337;DP=4804;DP4=2527,1985,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38685e-13;MQSB=0.811847;RPB=0.148333;SGB=-97.6745;VDB=0.105579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.1:19644275 chr01:019644275 0 W/19644275-19644275 FN3404-S SNP T -> G AC=1;AN=184;BQB=0.937523;DP=3217;DP4=1467,1507,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33773e-05;MQSB=0.998445;RPB=0.850297;SGB=25.1826;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.1:19647173 chr01:019647173 0 W/19647173-19647173 FN1732-S SNP G -> A AC=1;AN=188;BQB=0.289927;DP=2114;DP4=1026,1011,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000946074;MQB=8.68719e-05;MQSB=1.62714e-05;RPB=0.775302;SGB=39.5276;VDB=0.746499;EFF=INTRON(MODIFIER||||946|LOC_Os01g35504|protein_coding|CODING|LOC_Os01g35504.1|4|1) FN3843-S.SNP.1:19647702 chr01:019647702 0 W/19647702-19647702 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.970961;DP=2662;DP4=1515,1065,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000375657;MQB=1.37798e-06;MQSB=0.997423;RPB=0.924619;SGB=39.6545;VDB=0.488253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M699I|946|LOC_Os01g35504|protein_coding|CODING|LOC_Os01g35504.1|4|1) FN1323-S.SNP.1:19647861 chr01:019647861 0 W/19647861-19647861 FN1323-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN2651-S.SNP.1:19660622 chr01:019660622 0 W/19660622-19660622 FN2651-S SNP A -> G AC=1;AN=200;BQB=0.934956;DP=4859;DP4=2334,2321,13,20;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.154764;MQB=0.998995;MQSB=0;RPB=0.846423;SGB=146.368;VDB=0.12267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.1:19662749 chr01:019662749 0 W/19662749-19662749 FN-241 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g35540 retrotransposon protein, putative, unclassified SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1309-S.SNP.1:19667889 chr01:019667889 0 W/19667889-19667889 FN1309-S Single Base Substitution G-C INTRON HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1184-S.SNP.1:19671802 chr01:019671802 0 W/19671802-19671802 FN1184-S Single Base Substitution G-A INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2379.SNP.1:19671802 chr01:019671802 0 W/19671802-19671802 FN2379 SNP G -> A AC=1;AN=192;BQB=0.603711;DP=4306;DP4=1775,2286,15,8;HOB=5.42535e-05;ICB=0.000109072;MQ=21;MQ0F=0.379935;MQB=0.435459;MQSB=0;RPB=0.0801094;SGB=71.8591;VDB=0.763866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.1:19671802 chr01:019671802 0 W/19671802-19671802 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.999293;DP=3144;DP4=1284,1675,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=21;MQ0F=0.377545;MQB=0.278201;MQSB=0;RPB=0.263583;SGB=58.7391;VDB=0.433274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.1:19671802 chr01:019671802 0 W/19671802-19671802 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.997798;DP=3077;DP4=1263,1708,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.324992;MQB=0.419836;MQSB=0;RPB=0.371934;SGB=71.3514;VDB=0.631587;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.1:19685526 chr01:019685526 0 W/19685526-19685526 FN1561-S Single Base Substitution A-T INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-225.SNP.1:19687663 chr01:019687663 0 W/19687663-19687663 FN-225 Single Base Substitution G-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3455-S.SNP.1:19695643 chr01:019695643 0 W/19695643-19695643 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.924884;DP=2930;DP4=1267,1590,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.85899e-06;MQSB=0.899104;RPB=0.697707;SGB=21.6609;VDB=0.613304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.1:19705943 chr01:019705943 0 W/19705943-19705943 FN2165-S SNP C -> T AC=2;AN=168;BQB=0.123759;DP=4220;DP4=2060,2093,23,27;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0229858;MQB=0.445446;MQSB=5.0586e-12;RPB=0.927505;SGB=52.8385;VDB=0.481919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.1:19706061 chr01:019706061 0 W/19706061-19706061 FN3662-S SNP A -> G AC=1;AN=190;BQB=0.957431;DP=3334;DP4=1652,1536,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00059988;MQB=8.17973e-07;MQSB=0.854341;RPB=0.968436;SGB=28.9929;VDB=0.420136;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.1:19706591 chr01:019706591 0 W/19706591-19706591 FN-165 Single Base Substitution T-C INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN-50.SNP.1:19713864 chr01:019713864 0 W/19713864-19713864 FN-50 Single Base Substitution G-T INTERGENIC Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN-126.SNP.1:19716907 chr01:019716907 0 W/19716907-19716907 FN-126 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g35630 retrotransposon, putative, centromere-specific, expressed SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN623-S.SNP.1:19717139 chr01:019717139 0 W/19717139-19717139 FN623-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g35630 retrotransposon, putative, centromere-specific, expressed SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1050-S.SNP.1:19722876 chr01:019722876 0 W/19722876-19722876 FN1050-S Single Base Substitution C-T INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN696-S.SNP.1:19730614 chr01:019730614 0 W/19730614-19730614 FN696-S Single Base Substitution A-G INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3381-S.SNP.1:19731788 chr01:019731788 0 W/19731788-19731788 FN3381-S SNP A -> G AC=1;AN=184;BQB=0.326795;DP=3079;DP4=1477,1452,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32022e-07;MQSB=0.948635;RPB=0.899436;SGB=28.3187;VDB=0.408373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.1:19732101 chr01:019732101 0 W/19732101-19732101 FN-285 Single Base Substitution G-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-215.SNP.1:19734774 chr01:019734774 0 W/19734774-19734774 FN-215 Single Base Substitution G-C INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN2660-S.SNP.1:19737218 chr01:019737218 0 W/19737218-19737218 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.912908;DP=4664;DP4=2218,2205,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5303e-08;MQSB=0.782692;RPB=0.877514;SGB=14.3054;VDB=0.894148;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.1:19737688 chr01:019737688 0 W/19737688-19737688 FN459-S Single Base Substitution A-G INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN748-S.SNP.1:19743516 chr01:019743516 0 W/19743516-19743516 FN748-S Single Base Substitution C-T INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN982-S.SNP.1:19748194 chr01:019748194 0 W/19748194-19748194 FN982-S Single Base Substitution G-A INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2412.SNP.1:19754295 chr01:019754295 0 W/19754295-19754295 FN2412 SNP G -> A AC=1;AN=200;BQB=0.897859;DP=4856;DP4=2027,2432,8,18;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.192957;MQB=0.59067;MQSB=0;RPB=0.84651;SGB=22.3313;VDB=0.14416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.1:19759768 chr01:019759768 0 W/19759768-19759768 FN1042-S Single Base Substitution G-A INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3934-S.SNP.1:19762410 chr01:019762410 0 W/19762410-19762410 FN3934-S SNP G -> A AC=1;AN=156;BQB=0.979082;DP=1829;DP4=935,796,9,7;HOB=8.21828e-05;ICB=0.000165419;MQ=16;MQ0F=0.38327;MQB=0.0290509;MQSB=0.745724;RPB=0.898561;SGB=64.5449;VDB=0.880557;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.1:19777518 chr01:019777518 0 W/19777518-19777518 FN1600-S Single Base Substitution G-A INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3857-S.SNP.1:19778888 chr01:019778888 0 W/19778888-19778888 FN3857-S SNP C -> T AC=1;AN=156;BQB=0.785043;DP=2279;DP4=1107,1099,8,5;HOB=8.21828e-05;ICB=0.000165419;MQ=47;MQ0F=0.00351031;MQB=0.000400016;MQSB=0.144562;RPB=0.772733;SGB=51.4366;VDB=0.826413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D1578N|1840|LOC_Os01g35720|protein_coding|CODING|LOC_Os01g35720.1|13|1) FN3834-S.SNP.1:19787204 chr01:019787204 0 W/19787204-19787204 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.92608;DP=2765;DP4=1544,1116,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88958e-06;MQSB=0.972357;RPB=0.945729;SGB=35.4339;VDB=0.449235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.1:19800366 chr01:019800366 0 W/19800366-19800366 FN2444 SNP G -> A AC=1;AN=200;BQB=0.410275;DP=5452;DP4=2215,2963,8,13;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.433969;MQB=0.0670213;MQSB=0;RPB=0.91056;SGB=39.9056;VDB=0.993715;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L287|2012|LOC_Os01g35740|protein_coding|CODING|LOC_Os01g35740.1|1|1) FN2218-S.SNP.1:19804448 chr01:019804448 0 W/19804448-19804448 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.668555;DP=5271;DP4=2657,2243,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00151774;MQB=2.39123e-11;MQSB=0.135;RPB=0.773603;SGB=78.7471;VDB=0.284544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.1:19806448 chr01:019806448 0 W/19806448-19806448 FN3858-S SNP G -> T AC=1;AN=156;BQB=0.934876;DP=2309;DP4=1170,1047,7,5;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.97943e-07;MQSB=0.977742;RPB=0.985044;SGB=47.0672;VDB=0.129134;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.1:19821271 chr01:019821271 0 W/19821271-19821271 FN-273 Single Base Substitution C-T INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN1442-S.SNP.1:19829022 chr01:019829022 0 W/19829022-19829022 FN1442-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN516-S.SNP.1:19835487 chr01:019835487 0 W/19835487-19835487 FN516-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g35820 retrotransposon protein, putative, unclassified, expressed SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN748-S.SNP.1:19836654 chr01:019836654 0 W/19836654-19836654 FN748-S Single Base Substitution A-T INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-175.SNP.1:19836834 chr01:019836834 0 W/19836834-19836834 FN-175 Single Base Substitution G-A INTRON HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2244-S.SNP.1:19838923 chr01:019838923 0 W/19838923-19838923 FN2244-S SNP A -> T AC=1;AN=190;BQB=0.304526;DP=5050;DP4=2427,2325,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00039604;MQB=4.10701e-05;MQSB=0.00309785;RPB=0.750739;SGB=28.7675;VDB=0.630073;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R843|1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|6|1) FN2581-S.SNP.1:19838940 chr01:019838940 0 W/19838940-19838940 FN2581-S SNP A -> C AC=1;AN=198;BQB=0.998711;DP=4378;DP4=2158,2016,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.000228415;MQB=1.59517e-06;MQSB=4.4389e-15;RPB=0.990102;SGB=43.7442;VDB=0.500001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S838A|1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|6|1) FN2581-S.SNP.1:19838949 chr01:019838949 0 W/19838949-19838949 FN2581-S SNP G -> T AC=1;AN=198;BQB=0.998351;DP=4350;DP4=2125,2008,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.000229885;MQB=1.55757e-07;MQSB=1.73241e-19;RPB=0.430388;SGB=54.5295;VDB=0.506425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L835I|1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|6|1) FN2581-S.SNP.1:19838951 chr01:019838951 0 W/19838951-19838951 FN2581-S SNP C -> T AC=1;AN=198;BQB=0.989725;DP=4362;DP4=2108,2007,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=1.01492e-07;MQSB=2.26457e-19;RPB=0.85044;SGB=58.1246;VDB=0.718171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R834K|1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|6|1) FN4063-S.SNP.1:19839006 chr01:019839006 0 W/19839006-19839006 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.443943;DP=2357;DP4=1211,1061,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0135766;MQB=0.00973262;MQSB=8.79494e-35;RPB=0.61571;SGB=27.8864;VDB=0.54425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V816I|1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|6|1) FN2549-S.SNP.1:19841852 chr01:019841852 0 W/19841852-19841852 FN2549-S SNP A -> C AC=2;AN=198;BQB=0.916902;DP=4251;DP4=2046,2029,8,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.58743e-08;MQSB=0.969237;RPB=0.978467;SGB=43.7442;VDB=0.96202;EFF=INTRON(MODIFIER||||1592|LOC_Os01g35820|protein_coding|CODING|LOC_Os01g35820.1|2|1) FN859-S.SNP.1:19850132 chr01:019850132 0 W/19850132-19850132 FN859-S Single Base Substitution T-C INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN666-S.SNP.1:19850450 chr01:019850450 0 W/19850450-19850450 FN666-S Single Base Substitution C-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN537-S.SNP.1:19854744 chr01:019854744 0 W/19854744-19854744 FN537-S Single Base Substitution C-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN537-S.SNP.1:19854745 chr01:019854745 0 W/19854745-19854745 FN537-S Single Base Substitution G-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN3757-S.SNP.1:19855258 chr01:019855258 0 W/19855258-19855258 FN3757-S SNP G -> A AC=1;AN=190;BQB=0.530981;DP=2625;DP4=1065,1465,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.24804e-05;MQSB=0.985601;RPB=0.950896;SGB=44.5415;VDB=0.653865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G16R|905|LOC_Os01g35860|protein_coding|CODING|LOC_Os01g35860.1|1|1),SPLICE_SITE_REGION(LOW||||905|LOC_Os01g35860|protein_coding|CODING|LOC_Os01g35860.1|1|1) FN3057-S.SNP.1:19856054 chr01:019856054 0 W/19856054-19856054 FN3057-S SNP T -> C AC=1;AN=184;BQB=0.966649;DP=2896;DP4=1232,1570,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5625e-06;MQSB=0.897072;RPB=0.919383;SGB=32.2261;VDB=0.173134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S233P|905|LOC_Os01g35860|protein_coding|CODING|LOC_Os01g35860.1|2|1) FN939-S.SNP.1:19862288 chr01:019862288 0 W/19862288-19862288 FN939-S Single Base Substitution G-T INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2753-S.SNP.1:19869737 chr01:019869737 0 W/19869737-19869737 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.606372;DP=4548;DP4=2240,2042,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.8101e-22;MQSB=0.879948;RPB=0.148886;SGB=76.378;VDB=0.459508;EFF=SPLICE_SITE_REGION(LOW||||322|LOC_Os01g35890|protein_coding|CODING|LOC_Os01g35890.1|1|1),INTRON(MODIFIER||||322|LOC_Os01g35890|protein_coding|CODING|LOC_Os01g35890.1|1|1) FN2385.SNP.1:19870490 chr01:019870490 0 W/19870490-19870490 FN2385 SNP A -> T AC=1;AN=192;BQB=0.929445;DP=5123;DP4=2220,2527,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.2983e-09;MQSB=0.836167;RPB=0.161563;SGB=2.66176;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.1:19872276 chr01:019872276 0 W/19872276-19872276 FN2328 SNP C -> A AC=1;AN=192;BQB=0.979527;DP=5106;DP4=2230,2544,18,30;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.89607e-26;MQSB=0.883108;RPB=0.467205;SGB=55.8496;VDB=0.797702;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.1:19886275 chr01:019886275 0 W/19886275-19886275 FN591-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g35930 retrotransposon protein, putative, unclassified, expressed SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN1006-S.SNP.1:19887415 chr01:019887415 0 W/19887415-19887415 FN1006-S Single Base Substitution C-T INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1049-S.SNP.1:19888757 chr01:019888757 0 W/19888757-19888757 FN1049-S Single Base Substitution A-C INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN-148.SNP.1:19895142 chr01:019895142 0 W/19895142-19895142 FN-148 Single Base Substitution A-G INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. W706-3-1.SNP.1:19897058 chr01:019897058 0 W/19897058-19897058 W706-3-1 Single Base Substitution C-T INTRON HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2595-S.SNP.1:19902217 chr01:019902217 0 W/19902217-19902217 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.917197;DP=4132;DP4=1967,1973,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242014;MQB=6.94559e-11;MQSB=0.932716;RPB=0.914026;SGB=10.9445;VDB=0.935573;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.1:19914456 chr01:019914456 0 W/19914456-19914456 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.962986;DP=4057;DP4=2034,1765,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.81334e-07;MQSB=0.832725;RPB=0.33271;SGB=36.5539;VDB=0.83439;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.1:19919744 chr01:019919744 0 W/19919744-19919744 FN4052-S SNP A -> G AC=2;AN=168;BQB=0.986489;DP=2722;DP4=1224,1132,20,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.30077e-16;MQSB=0.377198;RPB=0.85169;SGB=80.5243;VDB=0.585485;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.1:19919961 chr01:019919961 0 W/19919961-19919961 FN-192 Single Base Substitution G-A INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2141-S.SNP.1:19922714 chr01:019922714 0 W/19922714-19922714 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.67412;DP=2447;DP4=959,1428,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00245198;MQB=1.57658e-07;MQSB=0.918411;RPB=0.00751565;SGB=4.1907;VDB=0.0529202;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I26|806|LOC_Os01g36000|protein_coding|CODING|LOC_Os01g36000.1|1|1) FN3965-S.SNP.1:19924508 chr01:019924508 0 W/19924508-19924508 FN3965-S SNP G -> A AC=1;AN=168;BQB=0.922267;DP=2910;DP4=1449,1342,9,19;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0323024;MQB=0.0208637;MQSB=0.198294;RPB=0.220754;SGB=86.2102;VDB=0.0159677;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V522M|806|LOC_Os01g36000|protein_coding|CODING|LOC_Os01g36000.1|3|1) FN2310.SNP.1:19928578 chr01:019928578 0 W/19928578-19928578 FN2310 SNP A -> T AC=1;AN=192;BQB=0.16404;DP=4931;DP4=2410,2151,20,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00344758;MQB=1.84188e-05;MQSB=0.232858;RPB=0.966033;SGB=-77.4217;VDB=0.988965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.1:19928700 chr01:019928700 0 W/19928700-19928700 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.632073;DP=4173;DP4=1956,2042,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00167745;MQB=2.80231e-06;MQSB=0.992603;RPB=0.738712;SGB=44.9538;VDB=0.791806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3556-S.SNP.1:19929427 chr01:019929427 0 W/19929427-19929427 FN3556-S SNP G -> T AC=1;AN=188;BQB=0.902304;DP=3495;DP4=1778,1632,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0460658;MQB=0.000124814;MQSB=1.40708e-17;RPB=0.990845;SGB=76.2387;VDB=0.281015;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A558|685|LOC_Os01g36020|protein_coding|CODING|LOC_Os01g36020.1|8|1) FN-67.SNP.1:19930257 chr01:019930257 0 W/19930257-19930257 FN-67 Single Base Substitution C-G INTRON HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN986-S.SNP.1:19942176 chr01:019942176 0 W/19942176-19942176 FN986-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g36040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1322-S.SNP.1:19949028 chr01:019949028 0 W/19949028-19949028 FN1322-S Single Base Substitution A-C INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN1348-S.SNP.1:19962054 chr01:019962054 0 W/19962054-19962054 FN1348-S Single Base Substitution A-C INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2652-S.SNP.1:19982389 chr01:019982389 0 W/19982389-19982389 FN2652-S SNP T -> C AC=1;AN=200;BQB=0.63761;DP=5023;DP4=2117,2645,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16157e-07;MQSB=0.743988;RPB=0.674868;SGB=43.8747;VDB=0.857158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.1:20007921 chr01:020007921 0 W/20007921-20007921 FN3772-S SNP A -> T AC=2;AN=190;BQB=0.751343;DP=3449;DP4=1395,1863,12,9;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0362424;MQB=4.0064e-08;MQSB=0.964637;RPB=0.500022;SGB=38.983;VDB=0.429959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K1741I|1826|LOC_Os01g36170|protein_coding|CODING|LOC_Os01g36170.1|3|1) FN3772-S.SNP.1:20007931 chr01:020007931 0 W/20007931-20007931 FN3772-S SNP A -> T AC=2;AN=190;BQB=0.928943;DP=3372;DP4=1377,1905,11,9;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0302491;MQB=3.05909e-08;MQSB=0.893384;RPB=0.375535;SGB=60.9777;VDB=0.12229;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R1744|1826|LOC_Os01g36170|protein_coding|CODING|LOC_Os01g36170.1|3|1) FN2673-S.SNP.1:20013569 chr01:020013569 0 W/20013569-20013569 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.806869;DP=5090;DP4=2463,2452,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.03061e-09;MQSB=0.0295226;RPB=0.29584;SGB=72.6852;VDB=0.82535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.1:20020246 chr01:020020246 0 W/20020246-20020246 FN2467 SNP C -> T AC=1;AN=200;BQB=0.999902;DP=5059;DP4=2327,2436,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.21318e-10;MQSB=0.992108;RPB=0.342597;SGB=29.4849;VDB=0.388246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.1:20020961 chr01:020020961 0 W/20020961-20020961 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3711-S.SNP.1:20025344 chr01:020025344 0 W/20025344-20025344 FN3711-S SNP G -> C AC=1;AN=190;BQB=0.627519;DP=2595;DP4=1269,1225,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16095e-06;MQSB=0.975778;RPB=0.956265;SGB=36.1006;VDB=0.590277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.1:20026652 chr01:020026652 0 W/20026652-20026652 FN2790-S SNP C -> A AC=2;AN=198;BQB=0.999628;DP=3925;DP4=1827,1810,25,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000254777;MQB=1.21479e-25;MQSB=0.91523;RPB=0.993828;SGB=3.4227;VDB=0.569883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.1:20028589 chr01:020028589 0 W/20028589-20028589 FN3771-S SNP G -> A AC=1;AN=190;BQB=0.8804;DP=3025;DP4=1492,1428,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.355e-09;MQSB=0.790481;RPB=0.857026;SGB=58.2031;VDB=0.12043;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.1:20036718 chr01:020036718 0 W/20036718-20036718 FN2426 SNP A -> G AC=1;AN=200;BQB=0.956244;DP=4961;DP4=2347,2352,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48631e-14;MQSB=0.920983;RPB=0.638886;SGB=79.9264;VDB=0.579093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.1:20040060 chr01:020040060 0 W/20040060-20040060 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.99441;DP=3863;DP4=1823,1814,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000258866;MQB=3.18962e-08;MQSB=0.997379;RPB=0.809041;SGB=63.3342;VDB=0.12829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1704-S.SNP.1:20040811 chr01:020040811 0 W/20040811-20040811 FN1704-S SNP T -> G AC=1;AN=188;BQB=0.0042919;DP=2780;DP4=2115,638,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00125519;MQSB=0.231184;RPB=0.699661;SGB=-56.0757;VDB=0.939336;EFF=INTERGENIC(MODIFIER||||||||||1) FN871-S.SNP.1:20042891 chr01:020042891 0 W/20042891-20042891 FN871-S Single Base Substitution G-A INTRON HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1184-S.SNP.1:20052078 chr01:020052078 0 W/20052078-20052078 FN1184-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN4112-S.SNP.1:20052176 chr01:020052176 0 W/20052176-20052176 FN4112-S SNP G -> A AC=1;AN=182;BQB=0.937606;DP=2960;DP4=1479,1416,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.09915e-06;MQSB=0.993443;RPB=0.710687;SGB=44.1115;VDB=0.717752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:20060552 chr01:020060552 0 W/20060552-20060552 FN2096-S SNP T -> C AC=2;AN=168;BQB=0.345069;DP=4175;DP4=2160,1945,30,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.86805e-25;MQSB=0.999986;RPB=0.773758;SGB=-121.42;VDB=0.786503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.1:20067010 chr01:020067010 0 W/20067010-20067010 FN1682-S SNP C -> G AC=2;AN=188;BQB=0.445489;DP=2554;DP4=1248,1242,11,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.44946e-13;MQSB=0.963968;RPB=0.768696;SGB=46.4225;VDB=0.195654;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.1:20069633 chr01:020069633 0 W/20069633-20069633 FN689-S Single Base Substitution C-T INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3877-S.SNP.1:20069852 chr01:020069852 0 W/20069852-20069852 FN3877-S SNP T -> A AC=1;AN=156;BQB=0.81971;DP=1645;DP4=941,615,8,3;HOB=8.21828e-05;ICB=0.000165419;MQ=43;MQ0F=0.0297872;MQB=0.0353573;MQSB=4.28035e-37;RPB=0.426812;SGB=27.3346;VDB=0.304945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.1:20077872 chr01:020077872 0 W/20077872-20077872 FN2626-S SNP T -> C AC=1;AN=200;BQB=0.650499;DP=4804;DP4=2431,2025,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74178e-05;MQSB=0.991852;RPB=0.731091;SGB=25.849;VDB=0.374396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.1:20080103 chr01:020080103 0 W/20080103-20080103 FN1424-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN2226-S.SNP.1:20080707 chr01:020080707 0 W/20080707-20080707 FN2226-S SNP A -> T AC=1;AN=190;BQB=0.0718039;DP=5129;DP4=2521,2346,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00019497;MQB=2.8663e-12;MQSB=0.921889;RPB=0.591108;SGB=14.9883;VDB=0.0893997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.1:20084612 chr01:020084612 0 W/20084612-20084612 FN2463 SNP G -> A AC=1;AN=200;BQB=0.986834;DP=4372;DP4=2022,2106,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.92442e-14;MQSB=0.871366;RPB=0.878566;SGB=114.132;VDB=0.358337;EFF=INTERGENIC(MODIFIER||||||||||1) W279-4-1.SNP.1:20087298 chr01:020087298 0 W/20087298-20087298 W279-4-1 Single Base Substitution A-T INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN2486.SNP.1:20088391 chr01:020088391 0 W/20088391-20088391 FN2486 SNP G -> A AC=1;AN=200;BQB=0.382887;DP=4695;DP4=2297,2140,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12445e-11;MQSB=0.967093;RPB=0.978215;SGB=77.2904;VDB=0.37097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.1:20089362 chr01:020089362 0 W/20089362-20089362 FN2579-S SNP G -> A AC=2;AN=198;BQB=0.996267;DP=4056;DP4=1958,1854,27,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.53162e-29;MQSB=0.991759;RPB=0.996788;SGB=251.734;VDB=0.995032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.1:20089877 chr01:020089877 0 W/20089877-20089877 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN1627-S.SNP.1:20089878 chr01:020089878 0 W/20089878-20089878 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3573-S.SNP.1:20090121 chr01:020090121 0 W/20090121-20090121 FN3573-S SNP A -> C AC=1;AN=188;BQB=0.983879;DP=2430;DP4=1172,1175,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=9.06891e-06;MQSB=0.0344707;RPB=0.907499;SGB=39.5276;VDB=0.233501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.1:20090830 chr01:020090830 0 W/20090830-20090830 FN2452 SNP C -> T AC=1;AN=200;BQB=0.339452;DP=4155;DP4=2573,1353,11,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.59494e-05;MQSB=0.358291;RPB=0.998889;SGB=19.0642;VDB=0.98161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.1:20097597 chr01:020097597 0 W/20097597-20097597 FN1082-S Single Base Substitution A-T STOP_GAINED HET LOC_Os01g36260 transposon protein, putative, unclassified, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1348-S.SNP.1:20102239 chr01:020102239 0 W/20102239-20102239 FN1348-S Single Base Substitution T-G STOP_GAINED HET LOC_Os01g36270 expressed protein SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1639-S.SNP.1:20110757 chr01:020110757 0 W/20110757-20110757 FN1639-S Single Base Substitution G-A INTRON Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN2696-S.SNP.1:20113792 chr01:020113792 0 W/20113792-20113792 FN2696-S SNP C -> T AC=2;AN=200;BQB=0.556791;DP=3675;DP4=2043,1337,16,6;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000272109;MQB=1.71047e-09;MQSB=0.96754;RPB=0.405434;SGB=69.1109;VDB=0.569805;EFF=INTRON(MODIFIER||||1758|LOC_Os01g36280|protein_coding|CODING|LOC_Os01g36280.1|4|1) FN4203-S.SNP.1:20114993 chr01:020114993 0 W/20114993-20114993 FN4203-S SNP G -> A AC=2;AN=170;BQB=0.996363;DP=2005;DP4=953,981,7,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.62141e-14;MQSB=0.901463;RPB=0.899416;SGB=101.184;VDB=0.562555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D978N|1758|LOC_Os01g36280|protein_coding|CODING|LOC_Os01g36280.1|6|1) FN2651-S.SNP.1:20120526 chr01:020120526 0 W/20120526-20120526 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.116316;DP=4570;DP4=2208,2039,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12903e-19;MQSB=0.805868;RPB=0.697305;SGB=31.9623;VDB=0.170339;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.1:20120527 chr01:020120527 0 W/20120527-20120527 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.533571;DP=4567;DP4=2202,2063,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06179e-19;MQSB=0.807926;RPB=0.93708;SGB=97.9523;VDB=0.269996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.1:20123872 chr01:020123872 0 W/20123872-20123872 FN-211 Single Base Substitution A-G INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN229-S.SNP.1:20126144 chr01:020126144 0 W/20126144-20126144 FN229-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g36294 cytochrome P450, putative, expressed SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN229-S.SNP.1:20126146 chr01:020126146 0 W/20126146-20126146 FN229-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN_N1-169-1.SNP.1:20136587 chr01:020136587 0 W/20136587-20136587 FN_N1-169-1 Single Base Substitution C-G HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. W470-2-1.SNP.1:20139984 chr01:020139984 0 W/20139984-20139984 W470-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1053-S.SNP.1:20140044 chr01:020140044 0 W/20140044-20140044 FN1053-S Single Base Substitution A-G INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN_769-4-1.SNP.1:20140581 chr01:020140581 0 W/20140581-20140581 FN_769-4-1 Single Base Substitution G-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. W554-1-1.SNP.1:20140581 chr01:020140581 0 W/20140581-20140581 W554-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3760-S.SNP.1:20142763 chr01:020142763 0 W/20142763-20142763 FN3760-S SNP C -> T AC=1;AN=190;BQB=0.785653;DP=3548;DP4=1881,1578,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.21228e-13;MQSB=0.933549;RPB=0.93148;SGB=94.6341;VDB=0.824652;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L130|456|LOC_Os01g36320|protein_coding|CODING|LOC_Os01g36320.1|2|1) FN1650-S.SNP.1:20143596 chr01:020143596 0 W/20143596-20143596 FN1650-S Single Base Substitution T-C INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2083-S.SNP.1:20144080 chr01:020144080 0 W/20144080-20144080 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.941163;DP=3316;DP4=1570,1531,87,95;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0147768;MQB=0;MQSB=0.310927;RPB=1.27349e-14;SGB=-1778.63;VDB=7.71419e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.1:20144189 chr01:020144189 0 W/20144189-20144189 FN2223-S SNP T -> A AC=2;AN=190;BQB=0.5146;DP=5174;DP4=2282,2497,25,30;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.000579822;MQB=6.45078e-06;MQSB=0.960341;RPB=0.999415;SGB=185.363;VDB=0.79672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.1:20151602 chr01:020151602 0 W/20151602-20151602 FN3715-S SNP A -> G AC=1;AN=190;BQB=0.967087;DP=2455;DP4=1169,1159,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.98813e-09;MQSB=0.874477;RPB=0.878375;SGB=26.2136;VDB=0.00278308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3507-S.SNP.1:20153752 chr01:020153752 0 W/20153752-20153752 FN3507-S SNP C -> A AC=1;AN=188;BQB=0.889102;DP=2970;DP4=1604,1310,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.38362e-08;MQSB=0.997365;RPB=0.43795;SGB=58.0655;VDB=0.225991;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P85T|360|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P85T|226|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P85T|200|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.3|1|1) FN2666-S.SNP.1:20153958 chr01:020153958 0 W/20153958-20153958 FN2666-S SNP A -> T AC=1;AN=200;BQB=0.103521;DP=5109;DP4=2194,2621,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.09228e-15;MQSB=0.977274;RPB=0.967277;SGB=23.9365;VDB=0.349983;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T153|360|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T153|226|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T153|200|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.3|1|1) FN4202-S.SNP.1:20155609 chr01:020155609 0 W/20155609-20155609 FN4202-S SNP G -> C AC=1;AN=170;BQB=0.921119;DP=2472;DP4=1361,1045,18,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2134e-16;MQSB=0.519496;RPB=0.978518;SGB=114.512;VDB=0.232442;EFF=UTR_3_PRIME(MODIFIER||374||226|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.2|4|1),UTR_3_PRIME(MODIFIER||1507||200|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.3|2|1),UTR_3_PRIME(MODIFIER||5||360|LOC_Os01g36350|protein_coding|CODING|LOC_Os01g36350.1|3|1) FN2553-S.SNP.1:20172679 chr01:020172679 0 W/20172679-20172679 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.968699;DP=3755;DP4=1948,1616,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000549132;MQSB=0.950276;RPB=0.821458;SGB=8.58354;VDB=0.873575;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R232|907|LOC_Os01g36370|protein_coding|CODING|LOC_Os01g36370.1|6|1) FN1065-S.SNP.1:20173167 chr01:020173167 0 W/20173167-20173167 FN1065-S Single Base Substitution C-T INTRON HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3427-S.SNP.1:20173349 chr01:020173349 0 W/20173349-20173349 FN3427-S SNP C -> G AC=1;AN=184;BQB=0.997847;DP=3207;DP4=1841,1221,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20759e-09;MQSB=0.999893;RPB=0.36706;SGB=71.3514;VDB=0.0456747;EFF=INTRON(MODIFIER||||907|LOC_Os01g36370|protein_coding|CODING|LOC_Os01g36370.1|6|1) FN2618-S.SNP.1:20174834 chr01:020174834 0 W/20174834-20174834 FN2618-S SNP G -> T AC=1;AN=198;BQB=0.940964;DP=4217;DP4=2013,1955,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.32572e-09;MQSB=0.842479;RPB=0.769946;SGB=58.7391;VDB=0.0891378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M537I|907|LOC_Os01g36370|protein_coding|CODING|LOC_Os01g36370.1|8|1) FN1252-S.SNP.1:20175389 chr01:020175389 0 W/20175389-20175389 FN1252-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g36370 transposon protein, putative, unclassified, expressed SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1662-S.SNP.1:20175887 chr01:020175887 0 W/20175887-20175887 FN1662-S Single Base Substitution C-T INTRON Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2340.SNP.1:20175887 chr01:020175887 0 W/20175887-20175887 FN2340 SNP C -> T AC=1;AN=192;BQB=0.17492;DP=4746;DP4=2312,2147,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000421407;MQB=5.69815e-11;MQSB=0.587821;RPB=0.0328884;SGB=24.5626;VDB=0.0392844;EFF=INTRON(MODIFIER||||907|LOC_Os01g36370|protein_coding|CODING|LOC_Os01g36370.1|10|1) FN2563-S.SNP.1:20175887 chr01:020175887 0 W/20175887-20175887 FN2563-S SNP C -> T AC=2;AN=198;BQB=0.0256378;DP=4213;DP4=1984,1993,9,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.89802e-11;MQSB=0.999179;RPB=0.945001;SGB=42.3199;VDB=0.738495;EFF=INTRON(MODIFIER||||907|LOC_Os01g36370|protein_coding|CODING|LOC_Os01g36370.1|10|1) FN-133.SNP.1:20175919 chr01:020175919 0 W/20175919-20175919 FN-133 Single Base Substitution C-G INTRON HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN404-S.SNP.1:20177577 chr01:020177577 0 W/20177577-20177577 FN404-S Single Base Substitution C-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1421-S.SNP.1:20178634 chr01:020178634 0 W/20178634-20178634 FN1421-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2243-S.SNP.1:20184106 chr01:020184106 0 W/20184106-20184106 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.913912;DP=4798;DP4=2305,2225,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22686e-14;MQSB=0.69634;RPB=0.777021;SGB=24.3115;VDB=0.675726;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.1:20186724 chr01:020186724 0 W/20186724-20186724 FN1252-S Single Base Substitution C-T INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN476-S.SNP.1:20187439 chr01:020187439 0 W/20187439-20187439 FN476-S Single Base Substitution A-G INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN543-S.SNP.1:20194816 chr01:020194816 0 W/20194816-20194816 FN543-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g36390 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3656-S.SNP.1:20203030 chr01:020203030 0 W/20203030-20203030 FN3656-S SNP C -> A AC=1;AN=190;BQB=0.699254;DP=2906;DP4=1454,1322,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.07134e-05;MQSB=0.953135;RPB=0.819912;SGB=44.5415;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-251.SNP.1:20210239 chr01:020210239 0 W/20210239-20210239 FN-251 Single Base Substitution A-T INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2599-S.SNP.1:20210508 chr01:020210508 0 W/20210508-20210508 FN2599-S SNP A -> G AC=1;AN=198;BQB=0.931097;DP=4630;DP4=2357,2079,19,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00194384;MQB=2.01384e-10;MQSB=0.000408541;RPB=0.394623;SGB=109.285;VDB=0.206026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.1:20217971 chr01:020217971 0 W/20217971-20217971 FN2298 SNP C -> T AC=1;AN=192;BQB=0.288601;DP=5990;DP4=2638,2947,17,21;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00100167;MQB=5.61354e-11;MQSB=4.1656e-06;RPB=0.566403;SGB=-172.59;VDB=0.0365625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.1:20220249 chr01:020220249 0 W/20220249-20220249 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.942262;DP=4425;DP4=2087,2096,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.73516e-08;MQSB=0.710183;RPB=0.94881;SGB=43.8747;VDB=0.96705;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.1:20221263 chr01:020221263 0 W/20221263-20221263 FN3396-S SNP C -> T AC=1;AN=184;BQB=0.533918;DP=3224;DP4=1646,1484,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82186e-09;MQSB=0.99939;RPB=0.0582583;SGB=60.4004;VDB=0.646714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S266L|1915|LOC_Os01g36430|protein_coding|CODING|LOC_Os01g36430.1|1|1) FN869-S.SNP.1:20223548 chr01:020223548 0 W/20223548-20223548 FN869-S Single Base Substitution G-A INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN1124-S.SNP.1:20225304 chr01:020225304 0 W/20225304-20225304 FN1124-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1252-S.SNP.1:20225314 chr01:020225314 0 W/20225314-20225314 FN1252-S Single Base Substitution A-T STOP_GAINED HET LOC_Os01g36430 retrotransposon protein, putative, unclassified, expressed SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3387-S.SNP.1:20226927 chr01:020226927 0 W/20226927-20226927 FN3387-S SNP C -> G AC=1;AN=184;BQB=0.946549;DP=3761;DP4=1807,1858,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.2648e-14;MQSB=0.99677;RPB=0.742595;SGB=93.9603;VDB=0.388685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.1:20234071 chr01:020234071 0 W/20234071-20234071 FN1036-S Single Base Substitution G-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN413-S.SNP.1:20236577 chr01:020236577 0 W/20236577-20236577 FN413-S Single Base Substitution A-G INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2723-S.SNP.1:20247758 chr01:020247758 0 W/20247758-20247758 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.415251;DP=4694;DP4=2417,1967,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51399e-11;MQSB=0.987242;RPB=0.85765;SGB=54.6902;VDB=0.0425722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.1:20249950 chr01:020249950 0 W/20249950-20249950 FN2535-S SNP G -> A AC=1;AN=198;BQB=0.671065;DP=3727;DP4=1848,1642,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.57541e-07;MQSB=0.905879;RPB=0.980384;SGB=36.5539;VDB=0.986404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H27Y|189|LOC_Os01g36480|protein_coding|CODING|LOC_Os01g36480.1|1|1) FN2376.SNP.1:20255725 chr01:020255725 0 W/20255725-20255725 FN2376 SNP T -> A AC=2;AN=192;BQB=0.331637;DP=4199;DP4=2103,1597,12,12;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.83226e-09;MQSB=9.36706e-09;RPB=0.664828;SGB=-67.3721;VDB=0.476317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.1:20256583 chr01:020256583 0 W/20256583-20256583 FN-53 Single Base Substitution A-G INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2279-S.SNP.1:20256603 chr01:020256603 0 W/20256603-20256603 FN2279-S SNP T -> C AC=1;AN=190;BQB=0.148569;DP=5135;DP4=2396,2374,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.11641e-07;MQSB=0.991218;RPB=0.58222;SGB=-14.8836;VDB=0.921221;EFF=INTRON(MODIFIER||||848|LOC_Os01g36500|protein_coding|CODING|LOC_Os01g36500.1|11|1) FN2430.SNP.1:20267343 chr01:020267343 0 W/20267343-20267343 FN2430 SNP A -> T AC=1;AN=200;BQB=0.344934;DP=4380;DP4=1767,1970,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49171e-12;MQSB=0.924726;RPB=0.699841;SGB=-39.6587;VDB=0.401005;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.1:20269952 chr01:020269952 0 W/20269952-20269952 FN4044-S SNP C -> A AC=1;AN=168;BQB=0.752208;DP=2994;DP4=1348,1531,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47046e-07;MQSB=0.85779;RPB=0.968335;SGB=69.8961;VDB=0.891937;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.1:20275474 chr01:020275474 0 W/20275474-20275474 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN1309-S.SNP.1:20276279 chr01:020276279 0 W/20276279-20276279 FN1309-S Single Base Substitution T-A STOP_GAINED HOMO LOC_Os01g36530 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1711-S.SNP.1:20277536 chr01:020277536 0 W/20277536-20277536 FN1711-S SNP C -> T AC=2;AN=188;BQB=0.783833;DP=3139;DP4=1272,1825,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.25144e-20;MQSB=0.950789;RPB=0.849346;SGB=139.845;VDB=0.308498;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V137|541|LOC_Os01g36530|protein_coding|CODING|LOC_Os01g36530.1|2|1) FN-330.SNP.1:20280060 chr01:020280060 0 W/20280060-20280060 FN-330 Single Base Substitution C-A INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1761-S.SNP.1:20282606 chr01:020282606 0 W/20282606-20282606 FN1761-S SNP T -> A AC=2;AN=188;BQB=0.213353;DP=3972;DP4=1968,1958,16,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.18549e-13;MQSB=0.998609;RPB=0.890765;SGB=-88.1232;VDB=0.548466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.1:20284465 chr01:020284465 0 W/20284465-20284465 FN3926-S SNP C -> A AC=1;AN=158;BQB=0.997706;DP=2467;DP4=1198,1138,15,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.27196e-17;MQSB=0.999379;RPB=0.570677;SGB=56.991;VDB=0.805892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L7M|550|LOC_Os01g36550|protein_coding|CODING|LOC_Os01g36550.1|1|1) FN1089-S.SNP.1:20286934 chr01:020286934 0 W/20286934-20286934 FN1089-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN3715-S.SNP.1:20287439 chr01:020287439 0 W/20287439-20287439 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.717047;DP=2879;DP4=1246,1495,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18188e-13;MQSB=0.99722;RPB=0.999619;SGB=46.6446;VDB=0.924014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F543L|550|LOC_Os01g36550|protein_coding|CODING|LOC_Os01g36550.1|9|1) FN2448.SNP.1:20290701 chr01:020290701 0 W/20290701-20290701 FN2448 SNP A -> T AC=1;AN=200;BQB=0.479202;DP=4829;DP4=2296,2219,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79917e-12;MQSB=0.900386;RPB=0.863985;SGB=45.1159;VDB=0.622973;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.1:20291945 chr01:020291945 0 W/20291945-20291945 FN3511-S SNP G -> A AC=1;AN=188;BQB=0.757235;DP=3454;DP4=1485,1901,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11081e-05;MQSB=0.99636;RPB=0.951212;SGB=48.979;VDB=0.203074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.1:20292348 chr01:020292348 0 W/20292348-20292348 FN2375 SNP G -> A AC=2;AN=192;BQB=0.0633803;DP=4472;DP4=2167,1972,19,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.07384e-15;MQSB=0.656687;RPB=0.891831;SGB=35.5131;VDB=0.544961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:20297544 chr01:020297544 0 W/20297544-20297544 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.995774;DP=3027;DP4=1191,1666,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.05631e-07;MQSB=0.992599;RPB=0.623143;SGB=10.8904;VDB=0.232284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.1:20297732 chr01:020297732 0 W/20297732-20297732 FN1749-S SNP G -> A AC=2;AN=188;BQB=0.85469;DP=2065;DP4=1199,815,18,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72673e-13;MQSB=0.998195;RPB=0.186412;SGB=48.9658;VDB=0.274317;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.1:20315789 chr01:020315789 0 W/20315789-20315789 FN845-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g36610 expressed protein SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2617-S.SNP.1:20318542 chr01:020318542 0 W/20318542-20318542 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.915585;DP=3849;DP4=1679,1952,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.12655e-15;MQSB=0.732017;RPB=0.974036;SGB=113.881;VDB=0.701528;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R197|364|LOC_Os01g36620|protein_coding|CODING|LOC_Os01g36620.1|1|1) FN2680-S.SNP.1:20323243 chr01:020323243 0 W/20323243-20323243 FN2680-S SNP A -> G AC=2;AN=200;BQB=0.976386;DP=4825;DP4=2311,2266,29,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.19039e-29;MQSB=0.636381;RPB=0.930233;SGB=64.0657;VDB=0.334027;EFF=INTRON(MODIFIER||||395|LOC_Os01g36630|protein_coding|CODING|LOC_Os01g36630.1|1|1) FN3733-S.SNP.1:20329537 chr01:020329537 0 W/20329537-20329537 FN3733-S SNP C -> T AC=1;AN=190;BQB=0.999802;DP=3319;DP4=1670,1487,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1787e-08;MQSB=0.949145;RPB=0.815058;SGB=62.7569;VDB=0.707795;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D134|905|LOC_Os01g36640|protein_coding|CODING|LOC_Os01g36640.1|2|1) FN-137.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN-137 Single Base Substitution C-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-76.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN-76 Single Base Substitution C-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1493-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN1493-S Single Base Substitution C-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2118-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN2118-S SNP C -> T AC=2;AN=168;BQB=0.108584;DP=4023;DP4=1818,2117,19,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.65501e-14;MQSB=0.970943;RPB=0.964857;SGB=-246.296;VDB=0.969885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.998608;DP=3184;DP4=1545,1467,22,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.24629e-16;MQSB=0.920068;RPB=0.197705;SGB=140.173;VDB=0.33545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.961836;DP=2938;DP4=1489,1321,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49395e-06;MQSB=0.597205;RPB=0.990718;SGB=25.439;VDB=0.522432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN3934-S SNP C -> T AC=2;AN=158;BQB=0.995434;DP=2539;DP4=1245,1170,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.16656e-14;MQSB=0.778781;RPB=0.956986;SGB=77.8763;VDB=0.579822;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN692-S Single Base Substitution C-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN811-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN811-S Single Base Substitution C-T INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN921-S.SNP.1:20335370 chr01:020335370 0 W/20335370-20335370 FN921-S Single Base Substitution C-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. W453-3-1.SNP.1:20357861 chr01:020357861 0 W/20357861-20357861 W453-3-1 Single Base Substitution A-T INTRON HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN415-S.SNP.1:20375480 chr01:020375480 0 W/20375480-20375480 FN415-S Single Base Substitution C-T INTERGENIC HOMO SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN415-S.SNP.1:20375481 chr01:020375481 0 W/20375481-20375481 FN415-S Single Base Substitution A-T INTERGENIC HOMO SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3553-S.SNP.1:20387283 chr01:020387283 0 W/20387283-20387283 FN3553-S SNP G -> T AC=1;AN=188;BQB=0.976317;DP=3828;DP4=2490,1172,16,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07539e-15;MQSB=0.850694;RPB=0.66135;SGB=92.677;VDB=0.423309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A374D|485|LOC_Os01g36720|protein_coding|CODING|LOC_Os01g36720.1|1|1) W426-1-1.SNP.1:20393111 chr01:020393111 0 W/20393111-20393111 W426-1-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3784-S.SNP.1:20395545 chr01:020395545 0 W/20395545-20395545 FN3784-S SNP G -> T AC=2;AN=190;BQB=0.636084;DP=2475;DP4=1242,1127,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00040404;MQB=3.49237e-11;MQSB=0.965676;RPB=0.745554;SGB=68.0854;VDB=0.318431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.1:20395550 chr01:020395550 0 W/20395550-20395550 FN3784-S SNP A -> T AC=2;AN=190;BQB=0.989621;DP=2480;DP4=1242,1149,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.80674e-13;MQSB=0.45107;RPB=0.693799;SGB=38.983;VDB=0.0529128;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.1:20396361 chr01:020396361 0 W/20396361-20396361 FN-291 Single Base Substitution C-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN3064-S.SNP.1:20399787 chr01:020399787 0 W/20399787-20399787 FN3064-S SNP G -> T AC=2;AN=184;BQB=0.999794;DP=2404;DP4=1223,1113,12,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.63901e-10;MQSB=0.996964;RPB=0.734755;SGB=66.8296;VDB=0.907038;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.1:20409780 chr01:020409780 0 W/20409780-20409780 FN911-S Single Base Substitution C-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN-88.SNP.1:20416318 chr01:020416318 0 W/20416318-20416318 FN-88 Single Base Substitution A-G INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. W360-2S-2.SNP.1:20420448 chr01:020420448 0 W/20420448-20420448 W360-2S-2 Single Base Substitution C-T INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1415-S.SNP.1:20422547 chr01:020422547 0 W/20422547-20422547 FN1415-S Single Base Substitution C-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN-46.SNP.1:20422844 chr01:020422844 0 W/20422844-20422844 FN-46 Single Base Substitution A-G INTERGENIC Homo SNo: 46, Mutant_ID: FN-46, Generation: M2, Mutations: 16, Genes: 6, Seed availability: Yes. FN1401-S.SNP.1:20422844 chr01:020422844 0 W/20422844-20422844 FN1401-S Single Base Substitution A-G INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1670-S.SNP.1:20425251 chr01:020425251 0 W/20425251-20425251 FN1670-S SNP T -> C AC=1;AN=188;BQB=0.0180911;DP=3532;DP4=1722,1768,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.263307;MQB=0.905839;MQSB=6.64209e-13;RPB=0.875445;SGB=-72.0994;VDB=0.0733129;EFF=INTRON(MODIFIER||||630|LOC_Os01g36766|protein_coding|CODING|LOC_Os01g36766.1|5|1) FN804-S.SNP.1:20426340 chr01:020426340 0 W/20426340-20426340 FN804-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g36766 transposon protein, putative, CACTA, En/Spm sub-class SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3903-S.SNP.1:20426904 chr01:020426904 0 W/20426904-20426904 FN3903-S SNP T -> A AC=1;AN=158;BQB=0.83414;DP=2476;DP4=941,1429,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0.0420032;MQB=0.0132634;MQSB=0.0188314;RPB=0.629943;SGB=-0.652741;VDB=0.930523;EFF=INTRON(MODIFIER||||630|LOC_Os01g36766|protein_coding|CODING|LOC_Os01g36766.1|2|1) FN_543-2-6.SNP.1:20431524 chr01:020431524 0 W/20431524-20431524 FN_543-2-6 Single Base Substitution G-A HET LOC_Os01g36780 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1310-S.SNP.1:20432286 chr01:020432286 0 W/20432286-20432286 FN1310-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g36780 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN3556-S.SNP.1:20436039 chr01:020436039 0 W/20436039-20436039 FN3556-S SNP G -> A AC=1;AN=188;BQB=0.993081;DP=3270;DP4=1832,1357,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.1359e-15;MQSB=0.948016;RPB=0.267246;SGB=112.585;VDB=0.672004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.1:20438343 chr01:020438343 0 W/20438343-20438343 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.312493;DP=3535;DP4=1678,1544,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.72172e-08;MQSB=0.914308;RPB=0.254823;SGB=-13.2407;VDB=0.715352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.1:20451151 chr01:020451151 0 W/20451151-20451151 FN3540-S SNP G -> C AC=2;AN=188;BQB=0.579183;DP=1473;DP4=31,1409,0,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08037e-06;MQSB=0.108137;RPB=0.337144;SGB=58.0655;VDB=0.682757;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.1:20453563 chr01:020453563 0 W/20453563-20453563 FN2454 SNP G -> A AC=1;AN=200;BQB=0.716585;DP=4639;DP4=2329,2093,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59096e-08;MQSB=0.98815;RPB=0.979834;SGB=1.46408;VDB=0.185657;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.1:20456357 chr01:020456357 0 W/20456357-20456357 FN786-S Single Base Substitution C-T INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN761-S.SNP.1:20456842 chr01:020456842 0 W/20456842-20456842 FN761-S Single Base Substitution A-C INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3663-S.SNP.1:20461911 chr01:020461911 0 W/20461911-20461911 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.99974;DP=2606;DP4=1100,1418,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00268611;MQB=1.00313e-05;MQSB=0.465647;RPB=0.978036;SGB=25.439;VDB=0.640271;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.1:20464539 chr01:020464539 0 W/20464539-20464539 FN3773-S SNP T -> A AC=1;AN=190;BQB=0.996285;DP=2510;DP4=1026,1330,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75887e-05;MQSB=0.831042;RPB=0.718742;SGB=39.9877;VDB=0.0135058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.1:20466268 chr01:020466268 0 W/20466268-20466268 FN2112-S SNP T -> C AC=1;AN=168;BQB=0.303653;DP=3871;DP4=1967,1857,15,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.95498e-10;MQSB=0.994651;RPB=0.991603;SGB=-116.046;VDB=0.938671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D474G|663|LOC_Os01g36790|protein_coding|CODING|LOC_Os01g36790.1|5|1) FN2245-S.SNP.1:20468571 chr01:020468571 0 W/20468571-20468571 FN2245-S SNP C -> G AC=2;AN=190;BQB=0.96165;DP=2925;DP4=1324,1264,6,3;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.000251131;MQSB=0.25005;RPB=0.859755;SGB=35.4339;VDB=0.65376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A227P|663|LOC_Os01g36790|protein_coding|CODING|LOC_Os01g36790.1|1|1) FN2691-S.SNP.1:20470322 chr01:020470322 0 W/20470322-20470322 FN2691-S SNP T -> A AC=1;AN=200;BQB=0.631413;DP=4935;DP4=2276,2453,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.96085e-08;MQSB=0.883087;RPB=0.50036;SGB=21.6694;VDB=0.303442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.1:20471162 chr01:020471162 0 W/20471162-20471162 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.994301;DP=2955;DP4=1518,1297,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.60067e-10;MQSB=0.914174;RPB=0.947581;SGB=34.3388;VDB=0.301135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.1:20474722 chr01:020474722 0 W/20474722-20474722 FN3452-S SNP A -> C AC=1;AN=184;BQB=0.908768;DP=3160;DP4=1675,1379,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.90203e-07;MQSB=0.0120922;RPB=0.557513;SGB=44.2207;VDB=0.069922;EFF=INTRON(MODIFIER||||495|LOC_Os01g36800|protein_coding|CODING|LOC_Os01g36800.1|2|1) FN1627-S.SNP.1:20482371 chr01:020482371 0 W/20482371-20482371 FN1627-S Single Base Substitution C-T INTRON HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3373-S.SNP.1:20487898 chr01:020487898 0 W/20487898-20487898 FN3373-S SNP A -> T AC=2;AN=184;BQB=0.833866;DP=3126;DP4=1372,1624,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.86773e-17;MQSB=0.608276;RPB=0.999461;SGB=121.091;VDB=0.252869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N200Y|382|LOC_Os01g36830|protein_coding|CODING|LOC_Os01g36830.1|5|1) FN504-S.SNP.1:20494478 chr01:020494478 0 W/20494478-20494478 FN504-S Single Base Substitution G-C INTRON HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-207.SNP.1:20494869 chr01:020494869 0 W/20494869-20494869 FN-207 Single Base Substitution A-G INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3830-S.SNP.1:20506128 chr01:020506128 0 W/20506128-20506128 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.830833;DP=2996;DP4=1396,1486,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00133511;MQB=3.77737e-09;MQSB=0.913057;RPB=0.764834;SGB=67.3108;VDB=0.0774566;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.1:20509806 chr01:020509806 0 W/20509806-20509806 FN2297 SNP T -> C AC=2;AN=192;BQB=0.401812;DP=5065;DP4=2445,2310,17,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.25323e-18;MQSB=0.998357;RPB=0.26094;SGB=33.9487;VDB=0.402712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.1:20510468 chr01:020510468 0 W/20510468-20510468 FN2333 SNP T -> A AC=1;AN=192;BQB=0.988079;DP=4695;DP4=2159,2311,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23675e-13;MQSB=0.648891;RPB=0.735896;SGB=44.3;VDB=0.215811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.1:20524146 chr01:020524146 0 W/20524146-20524146 FN3849-S SNP C -> G AC=1;AN=158;BQB=0.759696;DP=2617;DP4=1338,1193,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.89151e-06;MQSB=0.923066;RPB=0.875537;SGB=34.0735;VDB=0.564442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P182R|792|LOC_Os01g36860|protein_coding|CODING|LOC_Os01g36860.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P41R|651|LOC_Os01g36860|protein_coding|CODING|LOC_Os01g36860.2|2|1),UTR_5_PRIME(MODIFIER||83||583|LOC_Os01g36860|protein_coding|CODING|LOC_Os01g36860.3|1|1) FN2463.SNP.1:20528350 chr01:020528350 0 W/20528350-20528350 FN2463 SNP C -> T AC=1;AN=200;BQB=0.921898;DP=4422;DP4=2034,2069,13,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000226142;MQB=1.43063e-11;MQSB=0.742592;RPB=0.85351;SGB=100.316;VDB=0.00889618;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.1:20548717 chr01:020548717 0 W/20548717-20548717 FN458-S Single Base Substitution C-T INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN2542-S.SNP.1:20550288 chr01:020550288 0 W/20550288-20550288 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.628084;DP=4080;DP4=2088,1778,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06016e-12;MQSB=0.999424;RPB=0.873309;SGB=18.9201;VDB=0.853586;EFF=INTRON(MODIFIER||||514|LOC_Os01g36900|protein_coding|CODING|LOC_Os01g36900.1|9|1) FN2224-S.SNP.1:20556707 chr01:020556707 0 W/20556707-20556707 FN2224-S SNP C -> T AC=2;AN=190;BQB=0.945297;DP=5193;DP4=2556,2255,30,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.86431e-35;MQSB=0.947342;RPB=0.948399;SGB=156.461;VDB=0.525883;EFF=INTRON(MODIFIER||||514|LOC_Os01g36900|protein_coding|CODING|LOC_Os01g36900.1|2|1) FN-240.SNP.1:20557833 chr01:020557833 0 W/20557833-20557833 FN-240 Single Base Substitution A-C INTRON HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN3489-S.SNP.1:20561857 chr01:020561857 0 W/20561857-20561857 FN3489-S SNP A -> G AC=1;AN=184;BQB=0.507316;DP=2466;DP4=1198,1086,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.4667e-07;MQSB=0.72638;RPB=0.545856;SGB=39.2697;VDB=0.78588;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.1:20580573 chr01:020580573 0 W/20580573-20580573 FN472-S Single Base Substitution T-A INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-86.SNP.1:20580952 chr01:020580952 0 W/20580952-20580952 FN-86 Single Base Substitution A-T INTERGENIC HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN3700-S.SNP.1:20585936 chr01:020585936 0 W/20585936-20585936 FN3700-S SNP G -> T AC=1;AN=190;BQB=0.976404;DP=3124;DP4=1537,1498,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.8643e-11;MQSB=0.992659;RPB=0.985194;SGB=67.3108;VDB=0.27949;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q164K|474|LOC_Os01g36930|protein_coding|CODING|LOC_Os01g36930.1|6|1) FN3700-S.SNP.1:20585937 chr01:020585937 0 W/20585937-20585937 FN3700-S SNP A -> T AC=1;AN=190;BQB=0.999737;DP=3121;DP4=1514,1516,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.60537e-11;MQSB=0.99599;RPB=0.96105;SGB=67.3108;VDB=0.271923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D163E|474|LOC_Os01g36930|protein_coding|CODING|LOC_Os01g36930.1|6|1) FN4304-S.SNP.1:20588625 chr01:020588625 0 W/20588625-20588625 FN4304-S SNP A -> C AC=2;AN=170;BQB=0.561551;DP=2477;DP4=1285,1107,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.20798e-11;MQSB=0.973961;RPB=0.0944978;SGB=87.856;VDB=0.258158;EFF=INTRON(MODIFIER||||474|LOC_Os01g36930|protein_coding|CODING|LOC_Os01g36930.1|1|1) FN1344-S.SNP.1:20592598 chr01:020592598 0 W/20592598-20592598 FN1344-S Single Base Substitution C-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1486-S.SNP.1:20592598 chr01:020592598 0 W/20592598-20592598 FN1486-S Single Base Substitution C-T INTERGENIC Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN-134.SNP.1:20596203 chr01:020596203 0 W/20596203-20596203 FN-134 Single Base Substitution G-A INTRON HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN3417-S.SNP.1:20603479 chr01:020603479 0 W/20603479-20603479 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.253513;DP=3472;DP4=2041,1282,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000997178;MQSB=0.943744;RPB=0.655062;SGB=48.7425;VDB=0.431004;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.1:20603868 chr01:020603868 0 W/20603868-20603868 FN-228 Single Base Substitution G-T INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN-15.SNP.1:20605987 chr01:020605987 0 W/20605987-20605987 FN-15 Single Base Substitution T-C INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN3578-S.SNP.1:20605987 chr01:020605987 0 W/20605987-20605987 FN3578-S SNP T -> C AC=2;AN=188;BQB=0.998914;DP=3155;DP4=1167,1831,17,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.30845e-23;MQSB=0.892005;RPB=0.986085;SGB=189.821;VDB=0.761068;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.1:20605987 chr01:020605987 0 W/20605987-20605987 FN500-S Single Base Substitution T-C INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2488.SNP.1:20610187 chr01:020610187 0 W/20610187-20610187 FN2488 SNP A -> G AC=1;AN=200;BQB=0.214825;DP=4765;DP4=2415,2023,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.08405e-12;MQSB=0.93818;RPB=0.226059;SGB=91.1059;VDB=0.0209561;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.1:20610807 chr01:020610807 0 W/20610807-20610807 FN3434-S SNP T -> C AC=2;AN=184;BQB=0.994107;DP=1898;DP4=693,1149,11,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.15569e-11;MQSB=0.587329;RPB=0.950076;SGB=89.4385;VDB=0.112089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.1:20619513 chr01:020619513 0 W/20619513-20619513 FN2620-S SNP T -> G AC=1;AN=198;BQB=0.908267;DP=3447;DP4=2104,1101,14,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.15792e-10;MQSB=0.710776;RPB=0.959079;SGB=37.1297;VDB=0.530999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.1:20623619 chr01:020623619 0 W/20623619-20623619 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.5682;DP=2863;DP4=1301,1387,11,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92317e-05;MQSB=0.623504;RPB=0.667989;SGB=32.5467;VDB=0.775148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.1:20623911 chr01:020623911 0 W/20623911-20623911 FN2378 SNP C -> A AC=1;AN=192;BQB=0.295056;DP=4771;DP4=2423,1984,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=9.31371e-10;MQSB=0.105921;RPB=0.99285;SGB=-108.11;VDB=0.633716;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.1:20626373 chr01:020626373 0 W/20626373-20626373 FN_831-4-1 Single Base Substitution G-A Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN-119.SNP.1:20629459 chr01:020629459 0 W/20629459-20629459 FN-119 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g36970 expressed protein SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN747-S.SNP.1:20631203 chr01:020631203 0 W/20631203-20631203 FN747-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3677-S.SNP.1:20631584 chr01:020631584 0 W/20631584-20631584 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.989081;DP=2560;DP4=1400,1075,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68847e-05;MQSB=0.333669;RPB=0.643036;SGB=30.8803;VDB=0.943745;EFF=UTR_3_PRIME(MODIFIER||102||853|LOC_Os01g36970|protein_coding|CODING|LOC_Os01g36970.1|3|1) FN3322-S.SNP.1:20635535 chr01:020635535 0 W/20635535-20635535 FN3322-S SNP G -> T AC=1;AN=184;BQB=0.933649;DP=3423;DP4=1802,1521,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.17557e-10;MQSB=0.998016;RPB=0.300374;SGB=62.3078;VDB=0.520001;EFF=INTRON(MODIFIER||||199|LOC_Os01g36984|protein_coding|CODING|LOC_Os01g36984.1|2|1) FN3753-S.SNP.1:20641745 chr01:020641745 0 W/20641745-20641745 FN3753-S SNP A -> C AC=1;AN=190;BQB=0.790922;DP=2604;DP4=849,1636,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.3874e-07;MQSB=0.85005;RPB=0.834545;SGB=36.1006;VDB=0.436744;EFF=INTRON(MODIFIER||||406|LOC_Os01g37000|protein_coding|CODING|LOC_Os01g37000.1|3|1) FN2488.SNP.1:20647070 chr01:020647070 0 W/20647070-20647070 FN2488 SNP T -> A AC=1;AN=200;BQB=0.588549;DP=4649;DP4=2218,2084,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17254e-07;MQSB=0.534397;RPB=0.979074;SGB=-11.8999;VDB=0.401718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.1:20647071 chr01:020647071 0 W/20647071-20647071 FN2488 SNP A -> T AC=1;AN=200;BQB=0.96424;DP=4658;DP4=2222,2066,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94536e-11;MQSB=0.712005;RPB=0.976831;SGB=34.6953;VDB=0.534878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.1:20667853 chr01:020667853 0 W/20667853-20667853 FN2120-S SNP G -> T AC=2;AN=168;BQB=0.822509;DP=4602;DP4=2190,2340,28,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.83931e-31;MQSB=0.854086;RPB=0.940711;SGB=-195.691;VDB=0.997805;EFF=INTRON(MODIFIER||||256|LOC_Os01g37050|protein_coding|CODING|LOC_Os01g37050.1|1|1) FN-86.SNP.1:20670665 chr01:020670665 0 W/20670665-20670665 FN-86 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g37050 ribonuclease III domain protein, putative, expressed SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN3467-S.SNP.1:20675065 chr01:020675065 0 W/20675065-20675065 FN3467-S SNP G -> A AC=2;AN=184;BQB=0.184077;DP=2801;DP4=1343,1364,17,13;HOB=0.0215028;ICB=0.494625;MQ=15;MQ0F=0.456623;MQB=0.99703;MQSB=0;RPB=0.833257;SGB=61.1019;VDB=0.131828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.1:20682027 chr01:020682027 0 W/20682027-20682027 FN-281 Single Base Substitution T-C INTRON HOMO SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2620-S.SNP.1:20686699 chr01:020686699 0 W/20686699-20686699 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.980331;DP=3600;DP4=1702,1687,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0922222;MQB=0.777482;MQSB=0;RPB=0.2458;SGB=81.7147;VDB=0.764351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A462V|2091|LOC_Os01g37070|protein_coding|CODING|LOC_Os01g37070.1|1|1) FN2272-S.SNP.1:20688111 chr01:020688111 0 W/20688111-20688111 FN2272-S SNP G -> C AC=1;AN=190;BQB=0.929576;DP=4106;DP4=1878,1876,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.233804;MQB=0.346534;MQSB=0;RPB=0.998403;SGB=54.3062;VDB=0.792971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A909P|2091|LOC_Os01g37070|protein_coding|CODING|LOC_Os01g37070.1|2|1) FN3382-S.SNP.1:20693546 chr01:020693546 0 W/20693546-20693546 FN3382-S SNP G -> T AC=2;AN=184;BQB=0.993917;DP=4105;DP4=1964,2011,30,29;HOB=0.0215028;ICB=0.494625;MQ=29;MQ0F=0.0911084;MQB=0.59016;MQSB=3.6471e-29;RPB=0.861075;SGB=261.266;VDB=0.0294886;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R637|1054|LOC_Os01g37080|protein_coding|CODING|LOC_Os01g37080.1|2|1) FN957-S.SNP.1:20696672 chr01:020696672 0 W/20696672-20696672 FN957-S Single Base Substitution T-C INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN3828-S.SNP.1:20697625 chr01:020697625 0 W/20697625-20697625 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.96333;DP=2736;DP4=1091,1572,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000365497;MQB=3.08747e-07;MQSB=0.796007;RPB=0.839511;SGB=44.5415;VDB=0.871479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.1:20697806 chr01:020697806 0 W/20697806-20697806 FN2666-S SNP A -> T AC=1;AN=200;BQB=0.635744;DP=4427;DP4=1941,2332,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.68411e-17;MQSB=0.998565;RPB=0.234582;SGB=87.1368;VDB=0.565878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.1:20699972 chr01:020699972 0 W/20699972-20699972 FN1337-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-111.SNP.1:20701525 chr01:020701525 0 W/20701525-20701525 FN-111 Single Base Substitution A-G INTRON HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1288-S.SNP.1:20701889 chr01:020701889 0 W/20701889-20701889 FN1288-S Single Base Substitution T-G INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1481-S.SNP.1:20713841 chr01:020713841 0 W/20713841-20713841 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN230-S.SNP.1:20715864 chr01:020715864 0 W/20715864-20715864 FN230-S Single Base Substitution T-C INTRON HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3312-S.SNP.1:20721164 chr01:020721164 0 W/20721164-20721164 FN3312-S SNP A -> G AC=1;AN=184;BQB=0.521975;DP=2628;DP4=1285,1259,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03727e-07;MQSB=0.983775;RPB=0.850624;SGB=23.2751;VDB=0.679302;EFF=INTRON(MODIFIER||||555|LOC_Os01g37120|protein_coding|CODING|LOC_Os01g37120.1|2|1) FN4116-S.SNP.1:20726175 chr01:020726175 0 W/20726175-20726175 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.991462;DP=2396;DP4=1181,1145,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.98027e-07;MQSB=0.773209;RPB=0.794738;SGB=53.1331;VDB=0.792939;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.1:20738081 chr01:020738081 0 W/20738081-20738081 FN915-S Single Base Substitution C-G INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN625-S.SNP.1:20746537 chr01:020746537 0 W/20746537-20746537 FN625-S Single Base Substitution G-T INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN770-S.SNP.1:20752690 chr01:020752690 0 W/20752690-20752690 FN770-S Single Base Substitution T-A INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN4275-S.SNP.1:20760422 chr01:020760422 0 W/20760422-20760422 FN4275-S SNP C -> T AC=1;AN=170;BQB=0.980265;DP=2407;DP4=1283,1057,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.07955e-05;MQSB=0.0401552;RPB=0.355597;SGB=24.5502;VDB=0.684511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.1:20770082 chr01:020770082 0 W/20770082-20770082 FN2779-S SNP G -> T AC=2;AN=198;BQB=0.903904;DP=4164;DP4=1994,1883,43,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.59368e-31;MQSB=0.409105;RPB=0.669829;SGB=198.334;VDB=0.324807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.1:20770612 chr01:020770612 0 W/20770612-20770612 FN1332-S Single Base Substitution T-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN_788-1-1.SNP.1:20781396 chr01:020781396 0 W/20781396-20781396 FN_788-1-1 Single Base Substitution A-T Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN4133-S.SNP.1:20787752 chr01:020787752 0 W/20787752-20787752 FN4133-S SNP T -> C AC=2;AN=182;BQB=0.949097;DP=3095;DP4=1308,1582,10,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.92741e-11;MQSB=0.86638;RPB=0.658969;SGB=38.2092;VDB=0.508198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.1:20791210 chr01:020791210 0 W/20791210-20791210 FN1394-S Single Base Substitution A-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. W443-5-1-3.SNP.1:20791471 chr01:020791471 0 W/20791471-20791471 W443-5-1-3 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN1192-S.SNP.1:20798739 chr01:020798739 0 W/20798739-20798739 FN1192-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os01g37240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1382-S.SNP.1:20803992 chr01:020803992 0 W/20803992-20803992 FN1382-S Single Base Substitution A-C INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2408.SNP.1:20806793 chr01:020806793 0 W/20806793-20806793 FN2408 SNP A -> T AC=1;AN=198;BQB=0.999983;DP=4922;DP4=2427,2281,10,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02329e-05;MQSB=0.803152;RPB=0.775541;SGB=33.0592;VDB=0.809805;EFF=INTRON(MODIFIER||||479|LOC_Os01g37260|protein_coding|CODING|LOC_Os01g37260.1|1|1),INTRON(MODIFIER||||479|LOC_Os01g37260|protein_coding|CODING|LOC_Os01g37260.2|1|1) FN2434.SNP.1:20810592 chr01:020810592 0 W/20810592-20810592 FN2434 SNP C -> G AC=2;AN=198;BQB=0.923507;DP=4358;DP4=1667,2412,11,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.05516e-13;MQSB=0.92684;RPB=0.999785;SGB=-6.45336;VDB=0.375342;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.1:20833777 chr01:020833777 0 W/20833777-20833777 FN523-S Single Base Substitution C-T INTRON HOMO SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.1:20833777 chr01:020833777 0 W/20833777-20833777 FN532-S Single Base Substitution C-T INTRON HOMO SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3529-S.SNP.1:20841751 chr01:020841751 0 W/20841751-20841751 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.537742;DP=2480;DP4=1122,1295,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.18095e-07;MQSB=0.183183;RPB=0.236876;SGB=39.5276;VDB=0.892083;EFF=UTR_5_PRIME(MODIFIER||1317||352|LOC_Os01g37325|protein_coding|CODING|LOC_Os01g37325.1|1|1) FN723-S.SNP.1:20842511 chr01:020842511 0 W/20842511-20842511 FN723-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN_N1-130-1.SNP.1:20844772 chr01:020844772 0 W/20844772-20844772 FN_N1-130-1 Single Base Substitution T-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN4160-S.SNP.1:20845855 chr01:020845855 0 W/20845855-20845855 FN4160-S SNP C -> T AC=2;AN=170;BQB=0.504678;DP=2355;DP4=1064,1179,8,21;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00806794;MQB=9.77289e-05;MQSB=0.436366;RPB=0.604479;SGB=89.9604;VDB=0.934642;EFF=INTERGENIC(MODIFIER||||||||||1) FN-333.SNP.1:20846094 chr01:020846094 0 W/20846094-20846094 FN-333 Single Base Substitution T-C INTERGENIC HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1512-S.SNP.1:20847287 chr01:020847287 0 W/20847287-20847287 FN1512-S Single Base Substitution C-T INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2188-S.SNP.1:20849368 chr01:020849368 0 W/20849368-20849368 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.287866;DP=3863;DP4=1882,1729,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.48387e-11;MQSB=0.00992442;RPB=0.936088;SGB=51.7524;VDB=0.0764529;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.1:20851564 chr01:020851564 0 W/20851564-20851564 FN521-S Single Base Substitution T-G INTRON HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN4271-S.SNP.1:20851594 chr01:020851594 0 W/20851594-20851594 FN4271-S SNP C -> A AC=1;AN=170;BQB=0.999954;DP=1968;DP4=1139,774,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.156504;MQB=0.922397;MQSB=2.50956e-08;RPB=0.965321;SGB=25.6601;VDB=0.972889;EFF=INTRON(MODIFIER||||710|LOC_Os01g37350|protein_coding|CODING|LOC_Os01g37350.1|1|1),INTRON(MODIFIER||||710|LOC_Os01g37350|protein_coding|CODING|LOC_Os01g37350.2|1|1) FN1048-S.SNP.1:20863020 chr01:020863020 0 W/20863020-20863020 FN1048-S Single Base Substitution T-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1313-S.SNP.1:20865450 chr01:020865450 0 W/20865450-20865450 FN1313-S Single Base Substitution T-G INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3399-S.SNP.1:20868112 chr01:020868112 0 W/20868112-20868112 FN3399-S SNP G -> T AC=1;AN=184;BQB=0.978349;DP=2824;DP4=1359,1413,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000708215;MQB=4.75341e-05;MQSB=0.961749;RPB=0.880269;SGB=25.1826;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.1:20870488 chr01:020870488 0 W/20870488-20870488 FN2645-S SNP G -> T AC=1;AN=200;BQB=0.127094;DP=5259;DP4=2536,2413,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54021e-14;MQSB=0.998968;RPB=0.990672;SGB=123.342;VDB=0.925468;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V128L|614|LOC_Os01g37380|protein_coding|CODING|LOC_Os01g37380.1|3|1) FN2536-S.SNP.1:20873450 chr01:020873450 0 W/20873450-20873450 FN2536-S SNP A -> G AC=2;AN=198;BQB=0.0745928;DP=4450;DP4=2316,1843,11,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.55968e-13;MQSB=0.999997;RPB=0.373697;SGB=-7.88458;VDB=0.716298;EFF=INTERGENIC(MODIFIER||||||||||1) FN623-S.SNP.1:20874285 chr01:020874285 0 W/20874285-20874285 FN623-S Single Base Substitution T-C INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN3515-S.SNP.1:20877012 chr01:020877012 0 W/20877012-20877012 FN3515-S SNP A -> T AC=1;AN=188;BQB=0.572994;DP=2849;DP4=1310,1463,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.22459e-06;MQSB=0.882946;RPB=0.719676;SGB=20.9896;VDB=0.894812;EFF=INTRON(MODIFIER||||188|LOC_Os01g37390|protein_coding|CODING|LOC_Os01g37390.1|1|1) FN1625-S.SNP.1:20879771 chr01:020879771 0 W/20879771-20879771 FN1625-S Single Base Substitution C-T INTRON HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:20879771 chr01:020879771 0 W/20879771-20879771 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.928299;DP=1583;DP4=464,1072,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000631712;MQB=1.89673e-05;MQSB=0.784847;RPB=0.985251;SGB=44.4357;VDB=0.148379;EFF=INTRON(MODIFIER||||306|LOC_Os01g37400|protein_coding|CODING|LOC_Os01g37400.1|1|1) FN3547-S.SNP.1:20881186 chr01:020881186 0 W/20881186-20881186 FN3547-S SNP G -> T AC=2;AN=188;BQB=0.546644;DP=3767;DP4=1564,2117,16,16;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00637112;MQB=2.30598e-10;MQSB=0.0426191;RPB=0.885475;SGB=139.845;VDB=0.623591;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.1:20882447 chr01:020882447 0 W/20882447-20882447 FN4002-S SNP C -> T AC=1;AN=168;BQB=0.996904;DP=3150;DP4=1247,1763,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.138095;MQB=0.78401;MQSB=0;RPB=0.875546;SGB=65.4653;VDB=0.0899844;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.1:20883107 chr01:020883107 0 W/20883107-20883107 FN-180 Single Base Substitution G-C INTERGENIC HOMO SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3504-S.SNP.1:20892452 chr01:020892452 0 W/20892452-20892452 FN3504-S SNP T -> C AC=1;AN=188;BQB=0.832344;DP=2608;DP4=1264,1243,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1386e-06;MQSB=0.996064;RPB=0.963209;SGB=10.8165;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.1:20892700 chr01:020892700 0 W/20892700-20892700 FN2089-S SNP C -> T AC=1;AN=168;BQB=0.0204823;DP=3051;DP4=1574,1416,16,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05507e-08;MQSB=0.019816;RPB=0.723246;SGB=-40.0741;VDB=0.987376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.1:20898081 chr01:020898081 0 W/20898081-20898081 FN3513-S SNP G -> C AC=1;AN=188;BQB=0.912543;DP=2898;DP4=1329,1508,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=23;MQ0F=0.334369;MQB=0.514621;MQSB=0;RPB=0.155864;SGB=35.3493;VDB=0.13136;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.1:20904472 chr01:020904472 0 W/20904472-20904472 FN-179 Single Base Substitution T-A INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN4190-S.SNP.1:20913273 chr01:020913273 0 W/20913273-20913273 FN4190-S SNP C -> T AC=1;AN=170;BQB=0.980554;DP=2434;DP4=1175,1180,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.72618e-08;MQSB=0.969579;RPB=0.946912;SGB=31.4354;VDB=0.343518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.1:20917991 chr01:020917991 0 W/20917991-20917991 FN1412-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-133.SNP.1:20918016 chr01:020918016 0 W/20918016-20918016 FN-133 Single Base Substitution G-T INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-159.SNP.1:20918464 chr01:020918464 0 W/20918464-20918464 FN-159 Single Base Substitution A-G INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN1117-S.SNP.1:20926201 chr01:020926201 0 W/20926201-20926201 FN1117-S Single Base Substitution A-T INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1089-S.SNP.1:20927405 chr01:020927405 0 W/20927405-20927405 FN1089-S Single Base Substitution G-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1453-S.SNP.1:20929093 chr01:020929093 0 W/20929093-20929093 FN1453-S Single Base Substitution G-C INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN3801-S.SNP.1:20929589 chr01:020929589 0 W/20929589-20929589 FN3801-S SNP G -> T AC=1;AN=190;BQB=0.931965;DP=2342;DP4=938,1308,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01012e-07;MQSB=0.0514939;RPB=0.547275;SGB=43.2083;VDB=0.155601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.1:20938947 chr01:020938947 0 W/20938947-20938947 FN1761-S SNP G -> T AC=2;AN=188;BQB=0.13032;DP=3645;DP4=1887,1713,17,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.36501e-10;MQSB=0.887234;RPB=0.957235;SGB=-75.0128;VDB=0.732431;EFF=UTR_3_PRIME(MODIFIER||490||329|LOC_Os01g37470|protein_coding|CODING|LOC_Os01g37470.1|3|1),UTR_3_PRIME(MODIFIER||490||238|LOC_Os01g37470|protein_coding|CODING|LOC_Os01g37470.2|2|1) FN2664-S.SNP.1:20945656 chr01:020945656 0 W/20945656-20945656 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.126835;DP=4348;DP4=1834,2225,14,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35771e-20;MQSB=0.939818;RPB=0.941856;SGB=76.378;VDB=0.305712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A11V|242|LOC_Os01g37480|protein_coding|CODING|LOC_Os01g37480.1|1|1) FN3575-S.SNP.1:20946643 chr01:020946643 0 W/20946643-20946643 FN3575-S SNP C -> G AC=1;AN=188;BQB=0.123206;DP=2986;DP4=1477,1405,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.39805e-10;MQSB=0.999977;RPB=0.786873;SGB=98.9552;VDB=0.894593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.1:20947275 chr01:020947275 0 W/20947275-20947275 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.903941;DP=2879;DP4=1350,1411,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.60649e-07;MQSB=0.989139;RPB=0.618646;SGB=39.9877;VDB=0.230965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.1:20950139 chr01:020950139 0 W/20950139-20950139 FN1627-S Single Base Substitution T-C INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2142-S.SNP.1:20955243 chr01:020955243 0 W/20955243-20955243 FN2142-S SNP C -> A AC=1;AN=168;BQB=0.536098;DP=2144;DP4=893,1195,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000653635;MQSB=0.895081;RPB=0.942732;SGB=7.59999;VDB=0.548442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A90S|260|LOC_Os01g37510|protein_coding|CODING|LOC_Os01g37510.1|1|1) FN4069-S.SNP.1:20963437 chr01:020963437 0 W/20963437-20963437 FN4069-S SNP A -> G AC=1;AN=182;BQB=0.917281;DP=2760;DP4=1237,1382,15,25;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=1.71984e-17;MQSB=5.40944e-06;RPB=0.939567;SGB=-3.09513;VDB=0.241236;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.1:20987456 chr01:020987456 0 W/20987456-20987456 FN508-S Single Base Substitution A-G INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN508-S.SNP.1:20987457 chr01:020987457 0 W/20987457-20987457 FN508-S Single Base Substitution A-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN2220-S.SNP.1:20998790 chr01:020998790 0 W/20998790-20998790 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.227336;DP=5852;DP4=3420,2174,7,20;HOB=5.54017e-05;ICB=0.000111386;MQ=18;MQ0F=0.497949;MQB=0.0185426;MQSB=0;RPB=0.92468;SGB=85.8548;VDB=0.704834;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.1:20998790 chr01:020998790 0 W/20998790-20998790 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.986996;DP=3249;DP4=2047,1116,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=17;MQ0F=0.530317;MQB=0.0274015;MQSB=0;RPB=0.0284397;SGB=78.9707;VDB=0.222992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.1:21003504 chr01:021003504 0 W/21003504-21003504 FN2129-S SNP A -> G AC=2;AN=168;BQB=0.0333534;DP=4084;DP4=1890,2121,26,29;HOB=0.0235261;ICB=0.494119;MQ=10;MQ0F=0.55093;MQB=0.158497;MQSB=3.84839e-33;RPB=0.823928;SGB=-415.406;VDB=0.569957;EFF=INTERGENIC(MODIFIER||||||||||1) FN623-S.SNP.1:21014048 chr01:021014048 0 W/21014048-21014048 FN623-S Single Base Substitution T-A INTRON HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1012-S.SNP.1:21018144 chr01:021018144 0 W/21018144-21018144 FN1012-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1382-S.SNP.1:21018735 chr01:021018735 0 W/21018735-21018735 FN1382-S Single Base Substitution C-T INTRON HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-73.SNP.1:21019371 chr01:021019371 0 W/21019371-21019371 FN-73 Single Base Substitution A-C INTRON HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN4122-S.SNP.1:21023128 chr01:021023128 0 W/21023128-21023128 FN4122-S SNP A -> G AC=2;AN=182;BQB=0.761355;DP=2818;DP4=1219,1529,20,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.7332e-23;MQSB=0.979375;RPB=0.403346;SGB=179.437;VDB=0.890427;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.1:21023665 chr01:021023665 0 W/21023665-21023665 FN571-S Single Base Substitution G-A INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3312-S.SNP.1:21029436 chr01:021029436 0 W/21029436-21029436 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.964501;DP=2888;DP4=1409,1374,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.30867e-08;MQSB=0.937408;RPB=0.89271;SGB=48.7425;VDB=0.261515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.1:21031541 chr01:021031541 0 W/21031541-21031541 FN3400-S SNP T -> C AC=1;AN=184;BQB=0.170983;DP=2623;DP4=1102,1462,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000381243;MQB=1.71213e-05;MQSB=0.844137;RPB=0.608371;SGB=-3.85014;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.1:21032026 chr01:021032026 0 W/21032026-21032026 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.960738;DP=5076;DP4=2549,2294,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46101e-12;MQSB=0.839865;RPB=0.949993;SGB=103.742;VDB=0.0340151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.1:21032198 chr01:021032198 0 W/21032198-21032198 FN2566-S SNP G -> T AC=1;AN=198;BQB=0.862562;DP=4311;DP4=1961,2115,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000463929;MQB=0.000248244;MQSB=0.381831;RPB=0.446442;SGB=26.5745;VDB=0.442059;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.1:21045141 chr01:021045141 0 W/21045141-21045141 FN3913-S SNP A -> T AC=1;AN=158;BQB=0.987813;DP=2521;DP4=1110,1263,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000219294;MQSB=0.995772;RPB=0.994138;SGB=29.5899;VDB=0.0485975;EFF=INTRON(MODIFIER||||874|LOC_Os01g37600|protein_coding|CODING|LOC_Os01g37600.1|1|1) FN486-S.SNP.1:21058758 chr01:021058758 0 W/21058758-21058758 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3369-S.SNP.1:21058841 chr01:021058841 0 W/21058841-21058841 FN3369-S SNP A -> T AC=1;AN=184;BQB=0.95026;DP=2642;DP4=1381,1191,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000235665;MQSB=0.999572;RPB=0.985505;SGB=30.6558;VDB=0.591996;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.1:21064144 chr01:021064144 0 W/21064144-21064144 FN859-S Single Base Substitution T-C INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2487.SNP.1:21067000 chr01:021067000 0 W/21067000-21067000 FN2487 SNP G -> A AC=1;AN=200;BQB=0.0944953;DP=4056;DP4=1735,1977,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.05464e-16;MQSB=0.766223;RPB=0.715982;SGB=105.163;VDB=0.765572;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.1:21078033 chr01:021078033 0 W/21078033-21078033 FN504-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-329.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN-329 Single Base Substitution C-A INTRON HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1212-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN1212-S Single Base Substitution C-A INTRON HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1315-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN1315-S Single Base Substitution C-A INTRON HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1529-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN1529-S Single Base Substitution C-A INTRON Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1619-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN1619-S Single Base Substitution C-A INTRON Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2121-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN2121-S SNP C -> A AC=1;AN=168;BQB=0.725422;DP=3676;DP4=2123,1504,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0440696;MQB=0.931881;MQSB=0;RPB=0.684155;SGB=-74.3449;VDB=0.758155;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN2299.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN2299 SNP C -> A AC=1;AN=192;BQB=0.277692;DP=4866;DP4=2435,2128,22,10;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0108919;MQB=0.505555;MQSB=2.51115e-07;RPB=0.999988;SGB=-42.2982;VDB=0.697678;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN2445.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN2445 SNP C -> A AC=2;AN=200;BQB=0.886044;DP=4584;DP4=2272,2046,16,14;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0091623;MQB=0.0455161;MQSB=4.33259e-07;RPB=0.268651;SGB=-40.4483;VDB=0.330706;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN3512-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN3512-S SNP C -> A AC=2;AN=188;BQB=0.996782;DP=2505;DP4=1277,1139,12,13;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0171657;MQB=0.847893;MQSB=0.366216;RPB=0.283071;SGB=78.5038;VDB=0.319754;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN3697-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN3697-S SNP C -> A AC=2;AN=190;BQB=0.776456;DP=2782;DP4=1457,1218,6,6;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0129403;MQB=0.326879;MQSB=0.507279;RPB=0.90697;SGB=32.5467;VDB=0.239031;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN4049-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN4049-S SNP C -> A AC=2;AN=168;BQB=0.638138;DP=2537;DP4=1259,1167,10,16;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.0169492;MQB=0.926004;MQSB=0.514649;RPB=0.905552;SGB=79.3486;VDB=0.552964;EFF=INTRON(MODIFIER||||262|LOC_Os01g37700|protein_coding|CODING|LOC_Os01g37700.1|2|1) FN437-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN437-S Single Base Substitution C-A INTRON HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN550-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN550-S Single Base Substitution C-A INTRON HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN673-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN673-S Single Base Substitution C-A INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN770-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN770-S Single Base Substitution C-A INTRON HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN885-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN885-S Single Base Substitution C-A INTRON HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN912-S.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN912-S Single Base Substitution C-A INTRON HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_789-3-1.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 FN_789-3-1 Single Base Substitution C-A INTRON HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. W246-5-1.SNP.1:21079068 chr01:021079068 0 W/21079068-21079068 W246-5-1 Single Base Substitution C-A INTRON HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2485.SNP.1:21088552 chr01:021088552 0 W/21088552-21088552 FN2485 SNP C -> A AC=1;AN=200;BQB=0.806377;DP=4772;DP4=2241,2200,14,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00251467;MQB=7.30829e-10;MQSB=0.691025;RPB=0.371132;SGB=72.7161;VDB=0.756691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.1:21096303 chr01:021096303 0 W/21096303-21096303 FN2180-S SNP A -> T AC=2;AN=190;BQB=0.555066;DP=5153;DP4=2368,2350,23,27;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00989715;MQB=3.41279e-13;MQSB=3.84507e-20;RPB=0.66882;SGB=113.045;VDB=0.053585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.1:21097487 chr01:021097487 0 W/21097487-21097487 FN3917-S SNP T -> A AC=2;AN=158;BQB=0.868648;DP=2761;DP4=1348,1291,13,16;HOB=0.024996;ICB=0.493752;MQ=27;MQ0F=0.0572256;MQB=0.744884;MQSB=0;RPB=0.555963;SGB=121.348;VDB=0.966081;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.1:21101315 chr01:021101315 0 W/21101315-21101315 FN931-S Single Base Substitution T-C INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN931-S.SNP.1:21101317 chr01:021101317 0 W/21101317-21101317 FN931-S Single Base Substitution T-A INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN1265-S.SNP.1:21103802 chr01:021103802 0 W/21103802-21103802 FN1265-S Single Base Substitution A-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN873-S.SNP.1:21118460 chr01:021118460 0 W/21118460-21118460 FN873-S Single Base Substitution G-C INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3518-S.SNP.1:21129113 chr01:021129113 0 W/21129113-21129113 FN3518-S SNP A -> G AC=1;AN=188;BQB=0.682446;DP=2418;DP4=1262,1095,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24137e-05;MQSB=0.995453;RPB=0.885021;SGB=30.8063;VDB=0.251998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.1:21130955 chr01:021130955 0 W/21130955-21130955 FN3297-S SNP T -> G AC=1;AN=184;BQB=0.971896;DP=3159;DP4=1492,1452,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38116e-06;MQSB=0.935093;RPB=0.586288;SGB=48.7425;VDB=0.333659;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.1:21141101 chr01:021141101 0 W/21141101-21141101 FN-158 Single Base Substitution G-A STOP_GAINED HET LOC_Os01g37790 expressed protein SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-158.SNP.1:21141102 chr01:021141102 0 W/21141102-21141102 FN-158 Single Base Substitution G-A STOP_GAINED HET LOC_Os01g37790 expressed protein SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1693-S.SNP.1:21142225 chr01:021142225 0 W/21142225-21142225 FN1693-S SNP C -> T AC=2;AN=188;BQB=0.248791;DP=3222;DP4=1469,1693,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.75032e-14;MQSB=0.974385;RPB=0.996442;SGB=25.601;VDB=0.598589;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S566|774|LOC_Os01g37790|protein_coding|CODING|LOC_Os01g37790.1|3|1) FN471-S.SNP.1:21142639 chr01:021142639 0 W/21142639-21142639 FN471-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g37790 expressed protein SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1062-S.SNP.1:21148845 chr01:021148845 0 W/21148845-21148845 FN1062-S Single Base Substitution T-C INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1439-S.SNP.1:21160566 chr01:021160566 0 W/21160566-21160566 FN1439-S Single Base Substitution G-A INTRON HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN-133.SNP.1:21160984 chr01:021160984 0 W/21160984-21160984 FN-133 Single Base Substitution T-A INTRON HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN2231-S.SNP.1:21169430 chr01:021169430 0 W/21169430-21169430 FN2231-S SNP T -> G AC=1;AN=190;BQB=0.372539;DP=4546;DP4=2322,2014,17,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54409e-13;MQSB=0.0378036;RPB=0.652178;SGB=112.85;VDB=0.490627;EFF=INTRON(MODIFIER||||204|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.1|2|1),INTRON(MODIFIER||||191|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.2|2|1),INTRON(MODIFIER||||109|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.3|2|1) FN2231-S.SNP.1:21169431 chr01:021169431 0 W/21169431-21169431 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.647211;DP=4564;DP4=2186,1975,19,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3599e-11;MQSB=0.109972;RPB=0.795289;SGB=-7.12933;VDB=0.776832;EFF=INTRON(MODIFIER||||204|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.1|2|1),INTRON(MODIFIER||||191|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.2|2|1),INTRON(MODIFIER||||109|LOC_Os01g37832|protein_coding|CODING|LOC_Os01g37832.3|2|1) FN2488.SNP.1:21174380 chr01:021174380 0 W/21174380-21174380 FN2488 SNP C -> T AC=1;AN=200;BQB=0.839905;DP=4371;DP4=1994,2161,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.59914e-07;MQSB=0.965931;RPB=0.790824;SGB=11.2488;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.1:21175729 chr01:021175729 0 W/21175729-21175729 FN2532-S SNP T -> G AC=2;AN=198;BQB=0.918019;DP=3684;DP4=1717,1699,18,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.24232e-21;MQSB=0.930191;RPB=0.996256;SGB=130.027;VDB=0.626005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-S.SNP.1:21179173 chr01:021179173 0 W/21179173-21179173 FN1136-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g37837 seryl-tRNA synthetase, putative, expressed SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3815-S.SNP.1:21181309 chr01:021181309 0 W/21181309-21181309 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.998304;DP=3434;DP4=1870,1443,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.5594e-08;MQSB=0.979777;RPB=0.994578;SGB=58.2031;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.1:21181386 chr01:021181386 0 W/21181386-21181386 FN779-S Single Base Substitution G-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2530-S.SNP.1:21185871 chr01:021185871 0 W/21185871-21185871 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.947135;DP=4281;DP4=2175,1887,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.44444e-10;MQSB=0.981946;RPB=0.297382;SGB=54.5295;VDB=0.3436;EFF=INTRON(MODIFIER||||195|LOC_Os01g37850|protein_coding|CODING|LOC_Os01g37850.1|3|1) FN2149-S.SNP.1:21193453 chr01:021193453 0 W/21193453-21193453 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.0292831;DP=3322;DP4=1766,1507,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.9372e-06;MQSB=0.980052;RPB=0.279878;SGB=-69.6373;VDB=0.909987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A293V|1339|LOC_Os01g37860|protein_coding|CODING|LOC_Os01g37860.1|2|1) FN1250-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN1250-S Single Base Substitution A-T INTRON HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1757-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN1757-S SNP A -> T AC=2;AN=188;BQB=0.554248;DP=3982;DP4=1865,2037,27,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.46714e-18;MQSB=0.828135;RPB=0.998805;SGB=-204.309;VDB=0.129958;EFF=INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.1|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.2|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.3|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.4|4|1) FN2237-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN2237-S SNP A -> T AC=2;AN=190;BQB=0.144097;DP=4835;DP4=2061,2390,8,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.29059e-08;MQSB=0.338874;RPB=0.10271;SGB=-74.0833;VDB=0.0035282;EFF=INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.1|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.2|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.3|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.4|4|1) FN3394-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN3394-S SNP A -> T AC=2;AN=184;BQB=0.915718;DP=2612;DP4=1173,1280,24,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.67922e-17;MQSB=0.79174;RPB=0.927746;SGB=32.6727;VDB=0.220906;EFF=INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.1|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.2|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.3|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.4|4|1) FN3930-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN3930-S SNP A -> T AC=2;AN=158;BQB=0.107266;DP=2310;DP4=1041,1153,10,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.84352e-07;MQSB=0.910365;RPB=0.412455;SGB=-13.5825;VDB=0.660792;EFF=INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.1|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.2|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.3|4|1),INTRON(MODIFIER||||650|LOC_Os01g37870|protein_coding|CODING|LOC_Os01g37870.4|4|1) FN727-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN727-S Single Base Substitution A-T INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.1:21197418 chr01:021197418 0 W/21197418-21197418 FN867-S Single Base Substitution A-T INTRON HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2308.SNP.1:21204751 chr01:021204751 0 W/21204751-21204751 FN2308 SNP T -> C AC=1;AN=192;BQB=0.999536;DP=6858;DP4=2983,2911,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=21;MQ0F=0.255322;MQB=0.119494;MQSB=0;RPB=0.178902;SGB=-170.792;VDB=0.849471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.1:21210217 chr01:021210217 0 W/21210217-21210217 FN2397 SNP G -> T AC=1;AN=200;BQB=0.961251;DP=3841;DP4=1895,1768,4,6;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.032804;MQB=0.259844;MQSB=1.91975e-09;RPB=0.885633;SGB=40.4492;VDB=0.309361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K843N|1047|LOC_Os01g37880|protein_coding|CODING|LOC_Os01g37880.1|2|1) FN971-S.SNP.1:21210967 chr01:021210967 0 W/21210967-21210967 FN971-S Single Base Substitution T-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1410-S.SNP.1:21212464 chr01:021212464 0 W/21212464-21212464 FN1410-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g37890 transposon protein, putative, unclassified, expressed SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN-305.SNP.1:21224047 chr01:021224047 0 W/21224047-21224047 FN-305 Single Base Substitution G-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1700-S.SNP.1:21243364 chr01:021243364 0 W/21243364-21243364 FN1700-S SNP G -> A AC=2;AN=188;BQB=0.996265;DP=3307;DP4=1613,1603,13,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.40325e-13;MQSB=0.937622;RPB=0.0971175;SGB=61.6823;VDB=0.0245582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.1:21249906 chr01:021249906 0 W/21249906-21249906 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.518738;DP=5356;DP4=2914,2197,5,11;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.291075;MQB=0.266476;MQSB=0;RPB=0.157978;SGB=26.8797;VDB=0.718985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P967T|1068|LOC_Os01g37930|protein_coding|CODING|LOC_Os01g37930.1|2|1) FN727-S.SNP.1:21254395 chr01:021254395 0 W/21254395-21254395 FN727-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g37940 retrotransposon protein, putative, unclassified, expressed SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN951-S.SNP.1:21254776 chr01:021254776 0 W/21254776-21254776 FN951-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g37940 retrotransposon protein, putative, unclassified, expressed SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN4126-S.SNP.1:21263690 chr01:021263690 0 W/21263690-21263690 FN4126-S SNP T -> A AC=1;AN=182;BQB=0.997529;DP=2885;DP4=1557,1223,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.94839e-07;MQSB=0.969379;RPB=0.971883;SGB=48.6223;VDB=0.763885;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.1:21264982 chr01:021264982 0 W/21264982-21264982 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3951-S.SNP.1:21266956 chr01:021266956 0 W/21266956-21266956 FN3951-S SNP T -> C AC=1;AN=168;BQB=0.991701;DP=2624;DP4=1171,1352,1,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13451e-06;MQSB=0.851394;RPB=0.778595;SGB=24.4556;VDB=0.90511;EFF=INTRON(MODIFIER||||442|LOC_Os01g37960|protein_coding|CODING|LOC_Os01g37960.1|3|1) FN1057-S.SNP.1:21271391 chr01:021271391 0 W/21271391-21271391 FN1057-S Single Base Substitution C-T INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN4107-S.SNP.1:21271807 chr01:021271807 0 W/21271807-21271807 FN4107-S SNP C -> T AC=1;AN=182;BQB=0.942205;DP=2507;DP4=1075,1364,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.17888e-07;MQSB=0.843617;RPB=0.944729;SGB=39.6007;VDB=0.224432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.1:21279766 chr01:021279766 0 W/21279766-21279766 FN3580-S SNP G -> T AC=1;AN=188;BQB=0.965135;DP=2642;DP4=1214,1381,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.37043e-08;MQSB=0.759053;RPB=0.962724;SGB=53.5223;VDB=0.611332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.1:21282209 chr01:021282209 0 W/21282209-21282209 FN-303 Single Base Substitution A-T INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3484-S.SNP.1:21282880 chr01:021282880 0 W/21282880-21282880 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.994069;DP=2737;DP4=1313,1343,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.60216e-07;MQSB=1;RPB=0.77993;SGB=39.699;VDB=0.251186;EFF=INTRON(MODIFIER||||216|LOC_Os01g37990|protein_coding|CODING|LOC_Os01g37990.1|1|1) FN2138-S.SNP.1:21289564 chr01:021289564 0 W/21289564-21289564 FN2138-S SNP A -> G AC=1;AN=168;BQB=0.158049;DP=2586;DP4=1238,1313,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000130782;MQSB=0.00322298;RPB=0.889539;SGB=-14.5109;VDB=0.62333;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.1:21289923 chr01:021289923 0 W/21289923-21289923 FN1215-S Single Base Substitution T-C INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2328.SNP.1:21293578 chr01:021293578 0 W/21293578-21293578 FN2328 SNP A -> C AC=1;AN=192;BQB=0.7969;DP=5569;DP4=2924,2366,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.116358;MQB=0.302124;MQSB=0;RPB=0.602298;SGB=117.676;VDB=0.772168;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcC|S77|449|LOC_Os01g38010|protein_coding|CODING|LOC_Os01g38010.1|1|1) FN2129-S.SNP.1:21300109 chr01:021300109 0 W/21300109-21300109 FN2129-S SNP A -> T AC=1;AN=168;BQB=0.61168;DP=2226;DP4=728,1460,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.95584e-07;MQSB=0.974011;RPB=0.920774;SGB=7.05233;VDB=0.94637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.1:21307269 chr01:021307269 0 W/21307269-21307269 FN-274 Single Base Substitution G-A INTRON HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN1084-S.SNP.1:21307269 chr01:021307269 0 W/21307269-21307269 FN1084-S Single Base Substitution G-A INTRON HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2582-S.SNP.1:21307269 chr01:021307269 0 W/21307269-21307269 FN2582-S SNP G -> A AC=2;AN=198;BQB=0.746009;DP=3811;DP4=2009,1564,15,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.49717e-10;MQSB=0.154783;RPB=0.974272;SGB=90.9049;VDB=0.916639;EFF=INTRON(MODIFIER||||291|LOC_Os01g38030|protein_coding|CODING|LOC_Os01g38030.1|2|1) FN3707-S.SNP.1:21307269 chr01:021307269 0 W/21307269-21307269 FN3707-S SNP G -> A AC=2;AN=190;BQB=0.99737;DP=2353;DP4=1164,1065,7,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000424989;MQB=1.0525e-07;MQSB=0.144469;RPB=0.965576;SGB=43.2083;VDB=0.629151;EFF=INTRON(MODIFIER||||291|LOC_Os01g38030|protein_coding|CODING|LOC_Os01g38030.1|2|1) FN468-S.SNP.1:21307269 chr01:021307269 0 W/21307269-21307269 FN468-S Single Base Substitution G-A INTRON HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-72.SNP.1:21309711 chr01:021309711 0 W/21309711-21309711 FN-72 Single Base Substitution G-A INTERGENIC HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1462-S.SNP.1:21309711 chr01:021309711 0 W/21309711-21309711 FN1462-S Single Base Substitution G-A INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3769-S.SNP.1:21309711 chr01:021309711 0 W/21309711-21309711 FN3769-S SNP G -> A AC=2;AN=190;BQB=0.997004;DP=2865;DP4=1423,1313,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.4373e-13;MQSB=0.95218;RPB=0.932986;SGB=64.5316;VDB=0.945355;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.1:21312172 chr01:021312172 0 W/21312172-21312172 FN-291 Single Base Substitution C-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN892-S.SNP.1:21314180 chr01:021314180 0 W/21314180-21314180 FN892-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2309.SNP.1:21315602 chr01:021315602 0 W/21315602-21315602 FN2309 SNP C -> A AC=1;AN=192;BQB=0.98901;DP=4800;DP4=2242,2304,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0154167;MQB=3.97129e-05;MQSB=4.37823e-06;RPB=0.47664;SGB=28.9139;VDB=0.696592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.1:21315604 chr01:021315604 0 W/21315604-21315604 FN2309 SNP G -> A AC=1;AN=192;BQB=0.91258;DP=4805;DP4=2240,2253,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0162331;MQB=7.88224e-06;MQSB=4.55915e-08;RPB=0.952651;SGB=28.9139;VDB=0.493197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.1:21315608 chr01:021315608 0 W/21315608-21315608 FN2309 SNP T -> A AC=1;AN=192;BQB=0.144129;DP=4803;DP4=2289,2257,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0162398;MQB=1.75442e-07;MQSB=1.19163e-07;RPB=0.924425;SGB=43.3444;VDB=0.314737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.1:21336361 chr01:021336361 0 W/21336361-21336361 FN1651-S Single Base Substitution G-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3355-S.SNP.1:21340850 chr01:021340850 0 W/21340850-21340850 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.787504;DP=2392;DP4=1366,951,11,7;HOB=0.0215028;ICB=0.494625;MQ=22;MQ0F=0.408863;MQB=0.935978;MQSB=0;RPB=0.904164;SGB=75.8731;VDB=0.701226;EFF=UTR_5_PRIME(MODIFIER||544||120|LOC_Os01g38100|protein_coding|CODING|LOC_Os01g38100.1|1|1) FN-173.SNP.1:21363185 chr01:021363185 0 W/21363185-21363185 FN-173 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g38140 retrotransposon protein, putative, unclassified, expressed SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2478.SNP.1:21365218 chr01:021365218 0 W/21365218-21365218 FN2478 SNP C -> T AC=1;AN=200;BQB=0.943863;DP=4387;DP4=2171,1902,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000227946;MQB=3.45554e-12;MQSB=0.646339;RPB=0.982574;SGB=37.3004;VDB=0.545207;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1305L|1351|LOC_Os01g38140|protein_coding|CODING|LOC_Os01g38140.1|18|1) FN1351-S.SNP.1:21365243 chr01:021365243 0 W/21365243-21365243 FN1351-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN471-S.SNP.1:21367194 chr01:021367194 0 W/21367194-21367194 FN471-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g38150 retrotransposon protein, putative, unclassified, expressed SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN851-S.SNP.1:21373863 chr01:021373863 0 W/21373863-21373863 FN851-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g38160 retrotransposon protein, putative, unclassified, expressed SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3491-S.SNP.1:21376556 chr01:021376556 0 W/21376556-21376556 FN3491-S SNP A -> G AC=1;AN=188;BQB=0.914234;DP=3048;DP4=1388,1573,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.18399e-05;MQSB=0.99567;RPB=0.12223;SGB=26.2637;VDB=0.105704;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E11|643|LOC_Os01g38170|protein_coding|CODING|LOC_Os01g38170.1|1|1) FN-76.SNP.1:21387470 chr01:021387470 0 W/21387470-21387470 FN-76 Single Base Substitution C-T INTRON HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2360.SNP.1:21392225 chr01:021392225 0 W/21392225-21392225 FN2360 SNP A -> G AC=1;AN=192;BQB=0.998905;DP=5145;DP4=2294,2481,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.20115e-09;MQSB=0.990156;RPB=0.966142;SGB=28.9139;VDB=0.963325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.1:21398681 chr01:021398681 0 W/21398681-21398681 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.516039;DP=3189;DP4=1408,1696,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.12757e-09;MQSB=0.675011;RPB=0.689261;SGB=38.7926;VDB=0.194493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.1:21400807 chr01:021400807 0 W/21400807-21400807 FN2386 SNP G -> A AC=1;AN=192;BQB=0.329192;DP=4460;DP4=2185,2031,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.49824e-06;MQSB=0.98433;RPB=0.999978;SGB=43.3444;VDB=0.556976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.1:21401828 chr01:021401828 0 W/21401828-21401828 FN2223-S SNP T -> G AC=2;AN=190;BQB=0.703805;DP=4064;DP4=1753,1569,36,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.86167e-28;MQSB=0.706432;RPB=0.852989;SGB=161.571;VDB=0.360637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.1:21405761 chr01:021405761 0 W/21405761-21405761 FN-407 Single Base Substitution T-C INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.1:21405761 chr01:021405761 0 W/21405761-21405761 FN407-S Single Base Substitution T-C INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1332-S.SNP.1:21409773 chr01:021409773 0 W/21409773-21409773 FN1332-S Single Base Substitution G-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN781-S.SNP.1:21418721 chr01:021418721 0 W/21418721-21418721 FN781-S Single Base Substitution C-T INTRON HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN4110-S.SNP.1:21420712 chr01:021420712 0 W/21420712-21420712 FN4110-S SNP A -> C AC=1;AN=182;BQB=0.98732;DP=2753;DP4=1185,1518,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.21463e-06;MQSB=0.972083;RPB=0.998477;SGB=39.6007;VDB=0.0225549;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|2|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|2|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|2|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|2|1) FN973-S.SNP.1:21426162 chr01:021426162 0 W/21426162-21426162 FN973-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os01g38229 peptidyl-prolyl isomerase, putative, expressed SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN-97.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN-97 Single Base Substitution C-G INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1276-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN1276-S Single Base Substitution C-G INTRON HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1366-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN1366-S Single Base Substitution C-G INTRON HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1445-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN1445-S Single Base Substitution C-G INTRON HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1745-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN1745-S SNP C -> G AC=1;AN=188;BQB=0.831924;DP=2453;DP4=943,1476,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00036682;MQSB=0.977965;RPB=0.472131;SGB=13.3597;VDB=0.270781;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN2580-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN2580-S SNP C -> G AC=2;AN=198;BQB=0.896788;DP=4287;DP4=2173,1871,30,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.37847e-28;MQSB=0.343235;RPB=0.923369;SGB=68.3688;VDB=0.0760806;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN2739-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN2739-S SNP C -> G AC=2;AN=200;BQB=0.902867;DP=4635;DP4=2414,1974,18,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.68644e-25;MQSB=0.796955;RPB=0.999942;SGB=0.203511;VDB=0.731629;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN3699-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN3699-S SNP C -> G AC=2;AN=190;BQB=0.998796;DP=2197;DP4=977,1099,16,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.25265e-13;MQSB=0.640292;RPB=0.538637;SGB=46.6446;VDB=0.690356;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN3779-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN3779-S SNP C -> G AC=2;AN=190;BQB=0.998864;DP=2470;DP4=1233,1144,18,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.55953e-14;MQSB=0.877777;RPB=0.859741;SGB=49.1985;VDB=0.181583;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN4224-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN4224-S SNP C -> G AC=1;AN=168;BQB=0.942893;DP=2176;DP4=1084,1025,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.51044e-09;MQSB=0.765926;RPB=0.986275;SGB=45.206;VDB=0.543287;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|7|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|7|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|7|1) FN733-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN733-S Single Base Substitution C-G INTRON HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN852-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN852-S Single Base Substitution C-G INTRON HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN864-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN864-S Single Base Substitution C-G INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN944-S.SNP.1:21428496 chr01:021428496 0 W/21428496-21428496 FN944-S Single Base Substitution C-G INTRON HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2246-S.SNP.1:21432148 chr01:021432148 0 W/21432148-21432148 FN2246-S SNP G -> A AC=1;AN=190;BQB=0.490496;DP=5251;DP4=2338,2448,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.6671e-06;MQSB=0.902567;RPB=0.995931;SGB=4.11112;VDB=0.809638;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|9|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|9|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|9|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.4|9|1) FN2333.SNP.1:21434586 chr01:021434586 0 W/21434586-21434586 FN2333 SNP A -> G AC=1;AN=192;BQB=0.572664;DP=4764;DP4=2449,1916,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.26141e-15;MQSB=0.949897;RPB=0.982739;SGB=-6.30345;VDB=0.39416;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|10|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|10|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|10|1) FN3570-S.SNP.1:21436772 chr01:021436772 0 W/21436772-21436772 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.818327;DP=2926;DP4=1378,1465,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89503e-08;MQSB=0.998463;RPB=0.944712;SGB=46.7622;VDB=0.0123254;EFF=INTRON(MODIFIER||||653|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.1|10|1),INTRON(MODIFIER||||652|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.2|10|1),INTRON(MODIFIER||||422|LOC_Os01g38229|protein_coding|CODING|LOC_Os01g38229.3|10|1) FN-147.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN-147 Single Base Substitution G-A INTERGENIC HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN-214.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN-214 Single Base Substitution G-A INTERGENIC HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-61.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN-61 Single Base Substitution G-A INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1047-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1154-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN1154-S Single Base Substitution G-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1405-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN1405-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1532-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN1532-S Single Base Substitution G-A INTERGENIC Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1713-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN1713-S SNP G -> A AC=2;AN=188;BQB=0.847082;DP=2670;DP4=909,1691,6,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.01331e-14;MQSB=0.389052;RPB=0.883533;SGB=92.677;VDB=0.798336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN2114-S SNP G -> A AC=2;AN=168;BQB=0.378732;DP=2968;DP4=1082,1811,15,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.41882e-12;MQSB=0.308506;RPB=0.884029;SGB=-83.76;VDB=0.0834173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN2381 SNP G -> A AC=1;AN=192;BQB=0.856951;DP=4728;DP4=2206,2206,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.93853e-12;MQSB=0.736635;RPB=0.993752;SGB=26.127;VDB=0.63584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN2458 SNP G -> A AC=2;AN=200;BQB=0.039714;DP=4089;DP4=1868,1928,18,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.99712e-16;MQSB=0.82406;RPB=0.630188;SGB=38.383;VDB=0.798332;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN3496-S SNP G -> A AC=2;AN=188;BQB=0.928093;DP=3131;DP4=1713,1324,22,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.17792e-19;MQSB=0.786383;RPB=0.411138;SGB=117.48;VDB=0.216292;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN4066-S SNP G -> A AC=2;AN=168;BQB=0.987625;DP=2578;DP4=1217,1247,18,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.5952e-13;MQSB=0.17068;RPB=0.940349;SGB=48.9237;VDB=0.905588;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN771-S Single Base Substitution G-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN866-S.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 FN866-S Single Base Substitution G-A INTERGENIC HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. W247-2-1.SNP.1:21442377 chr01:021442377 0 W/21442377-21442377 W247-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3560-S.SNP.1:21466020 chr01:021466020 0 W/21466020-21466020 FN3560-S SNP G -> A AC=2;AN=188;BQB=0.999974;DP=3025;DP4=1322,1628,18,19;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=3.92047e-12;MQSB=0.84699;RPB=0.810745;SGB=162.561;VDB=0.932335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R581Q|688|LOC_Os01g38260|protein_coding|CODING|LOC_Os01g38260.1|2|1) FN503-S.SNP.1:21469563 chr01:021469563 0 W/21469563-21469563 FN503-S Single Base Substitution C-T INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN1118-S.SNP.1:21474460 chr01:021474460 0 W/21474460-21474460 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2658-S.SNP.1:21476490 chr01:021476490 0 W/21476490-21476490 FN2658-S SNP A -> T AC=1;AN=200;BQB=0.961168;DP=4412;DP4=2010,1811,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.69235e-11;MQSB=0.908281;RPB=0.976631;SGB=-10.0844;VDB=0.709078;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.1:21476745 chr01:021476745 0 W/21476745-21476745 FN_N1-119-1 Single Base Substitution C-A Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2612-S.SNP.1:21477387 chr01:021477387 0 W/21477387-21477387 FN2612-S SNP A -> T AC=1;AN=198;BQB=0.611895;DP=3838;DP4=1975,1565,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0260552;MQB=0.819898;MQSB=1.86276e-35;RPB=0.995414;SGB=100.095;VDB=0.0920993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.1:21479552 chr01:021479552 0 W/21479552-21479552 FN3595-S SNP G -> A AC=1;AN=190;BQB=0.997903;DP=2956;DP4=1487,1363,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.82053e-08;MQSB=0.8438;RPB=0.687663;SGB=39.6545;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.1:21479974 chr01:021479974 0 W/21479974-21479974 FN2098-S SNP A -> C AC=1;AN=168;BQB=0.960219;DP=3108;DP4=1519,1532,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.33229e-16;MQSB=0.926444;RPB=0.947489;SGB=-10.2027;VDB=0.154508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F270V|376|LOC_Os01g38300|protein_coding|CODING|LOC_Os01g38300.1|1|1) FN-172.SNP.1:21482642 chr01:021482642 0 W/21482642-21482642 FN-172 Single Base Substitution C-T INTERGENIC HOMO SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN3437-S.SNP.1:21484273 chr01:021484273 0 W/21484273-21484273 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.998899;DP=3289;DP4=1507,1638,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.142292;MQB=0.594921;MQSB=1.02203e-39;RPB=0.458945;SGB=35.7479;VDB=0.432226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.1:21491507 chr01:021491507 0 W/21491507-21491507 FN3459-S SNP C -> T AC=1;AN=184;BQB=0.951294;DP=3645;DP4=2101,1378,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85204e-08;MQSB=0.843234;RPB=0.999378;SGB=3.75875;VDB=0.233892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.1:21495714 chr01:021495714 0 W/21495714-21495714 FN3764-S SNP T -> A AC=2;AN=190;BQB=0.539276;DP=3150;DP4=1439,1524,12,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.03698e-12;MQSB=0.969866;RPB=0.267171;SGB=121.957;VDB=0.0400254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.1:21499131 chr01:021499131 0 W/21499131-21499131 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN-314.SNP.1:21500241 chr01:021500241 0 W/21500241-21500241 FN-314 Single Base Substitution C-T INTERGENIC HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2640-S.SNP.1:21506274 chr01:021506274 0 W/21506274-21506274 FN2640-S SNP G -> A AC=1;AN=200;BQB=0.997637;DP=5228;DP4=2470,2475,6,15;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00133894;MQB=2.30933e-07;MQSB=0.00310662;RPB=0.31795;SGB=39.9056;VDB=0.725006;EFF=INTRON(MODIFIER||||247|LOC_Os01g38330|protein_coding|CODING|LOC_Os01g38330.1|1|1) FN2251-S.SNP.1:21506511 chr01:021506511 0 W/21506511-21506511 FN2251-S SNP G -> C AC=1;AN=190;BQB=0.0822668;DP=5128;DP4=2495,2289,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000422107;MQSB=0.994081;RPB=0.717594;SGB=1.00337;VDB=0.426591;EFF=INTRON(MODIFIER||||247|LOC_Os01g38330|protein_coding|CODING|LOC_Os01g38330.1|1|1) FN1008-S.SNP.1:21507663 chr01:021507663 0 W/21507663-21507663 FN1008-S Single Base Substitution T-A INTRON HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2620-S.SNP.1:21508580 chr01:021508580 0 W/21508580-21508580 FN2620-S SNP C -> T AC=2;AN=198;BQB=0.750772;DP=4189;DP4=2013,1869,25,33;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.30761e-32;MQSB=0.83097;RPB=0.697477;SGB=135.744;VDB=0.757334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R22K|247|LOC_Os01g38330|protein_coding|CODING|LOC_Os01g38330.1|1|1) FN4023-S.SNP.1:21509543 chr01:021509543 0 W/21509543-21509543 FN4023-S SNP C -> A AC=1;AN=168;BQB=0.950579;DP=2710;DP4=1387,1231,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00184502;MQB=0.000180439;MQSB=0.951163;RPB=0.666581;SGB=24.4556;VDB=0.92763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.1:21512527 chr01:021512527 0 W/21512527-21512527 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.499268;DP=3254;DP4=1631,1565,20,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.37112e-15;MQSB=0.999925;RPB=0.707114;SGB=-139.169;VDB=0.901801;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.1:21513536 chr01:021513536 0 W/21513536-21513536 FN1492-S Single Base Substitution G-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN4253-S.SNP.1:21513921 chr01:021513921 0 W/21513921-21513921 FN4253-S SNP T -> C AC=1;AN=170;BQB=0.957175;DP=2057;DP4=870,1122,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.7558e-07;MQSB=0.952837;RPB=0.567484;SGB=24.5502;VDB=0.546507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:21516121 chr01:021516121 0 W/21516121-21516121 FN2235-S SNP T -> C AC=1;AN=190;BQB=0.592754;DP=4279;DP4=2115,1827,11,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.50183e-16;MQSB=0.995022;RPB=0.830242;SGB=-42.5702;VDB=0.627908;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K183|386|LOC_Os01g38340|protein_coding|CODING|LOC_Os01g38340.1|6|1) FN3710-S.SNP.1:21518617 chr01:021518617 0 W/21518617-21518617 FN3710-S SNP G -> A AC=2;AN=190;BQB=0.496273;DP=2936;DP4=1359,1434,21,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10998e-15;MQSB=0.945448;RPB=0.967499;SGB=61.9679;VDB=0.170776;EFF=INTRON(MODIFIER||||386|LOC_Os01g38340|protein_coding|CODING|LOC_Os01g38340.1|3|1) FN3835-S.SNP.1:21523301 chr01:021523301 0 W/21523301-21523301 FN3835-S SNP C -> T AC=1;AN=190;BQB=0.218003;DP=2264;DP4=846,1245,1,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000441696;MQB=0.000294768;MQSB=5.95278e-14;RPB=0.123426;SGB=-0.550503;VDB=0.331212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.1:21525133 chr01:021525133 0 W/21525133-21525133 FN3058-S SNP A -> G AC=1;AN=184;BQB=0.587863;DP=2485;DP4=1276,1107,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79754e-10;MQSB=0.991117;RPB=0.883518;SGB=45.9712;VDB=0.289662;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.1:21530464 chr01:021530464 0 W/21530464-21530464 FN995-S Single Base Substitution A-G INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN995-S.SNP.1:21530465 chr01:021530465 0 W/21530465-21530465 FN995-S Single Base Substitution T-A INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN3288-S.SNP.1:21539225 chr01:021539225 0 W/21539225-21539225 FN3288-S SNP T -> C AC=1;AN=184;BQB=0.980529;DP=3108;DP4=1537,1416,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.26775e-05;MQSB=0.926537;RPB=0.935827;SGB=21.6609;VDB=0.144271;EFF=INTRON(MODIFIER||||422|LOC_Os01g38359|protein_coding|CODING|LOC_Os01g38359.1|2|1),INTRON(MODIFIER||||417|LOC_Os01g38359|protein_coding|CODING|LOC_Os01g38359.2|2|1) FN470-S.SNP.1:21540086 chr01:021540086 0 W/21540086-21540086 FN470-S Single Base Substitution A-C INTRON HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1316-S.SNP.1:21544216 chr01:021544216 0 W/21544216-21544216 FN1316-S Single Base Substitution T-A INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1316-S.SNP.1:21544217 chr01:021544217 0 W/21544217-21544217 FN1316-S Single Base Substitution C-A INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN-153.SNP.1:21547456 chr01:021547456 0 W/21547456-21547456 FN-153 Single Base Substitution C-A INTRON HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2280-S.SNP.1:21559495 chr01:021559495 0 W/21559495-21559495 FN2280-S SNP T -> C AC=1;AN=190;BQB=0.830016;DP=4405;DP4=2432,1591,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000227015;MQB=1.72903e-13;MQSB=0.0797115;RPB=0.340505;SGB=19.6499;VDB=0.552601;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.1:21561482 chr01:021561482 0 W/21561482-21561482 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1697-S.SNP.1:21561525 chr01:021561525 0 W/21561525-21561525 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.000705055;DP=3745;DP4=1880,1805,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.5642e-07;MQSB=0.846436;RPB=0.162457;SGB=-98.724;VDB=0.905382;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.1:21565411 chr01:021565411 0 W/21565411-21565411 FN-59 Single Base Substitution A-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2670-S.SNP.1:21565654 chr01:021565654 0 W/21565654-21565654 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.713587;DP=4504;DP4=2141,2063,20,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.51328e-18;MQSB=0.999584;RPB=0.0701232;SGB=76.378;VDB=0.498702;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.1:21566240 chr01:021566240 0 W/21566240-21566240 FN-86 Single Base Substitution A-C INTERGENIC HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1492-S.SNP.1:21568547 chr01:021568547 0 W/21568547-21568547 FN1492-S Single Base Substitution G-A INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN3796-S.SNP.1:21569274 chr01:021569274 0 W/21569274-21569274 FN3796-S SNP G -> T AC=1;AN=190;BQB=0.987696;DP=2551;DP4=1258,1232,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.88118e-05;MQSB=0.999879;RPB=0.966156;SGB=35.4339;VDB=0.825911;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.1:21578580 chr01:021578580 0 W/21578580-21578580 FN759-S Single Base Substitution T-G INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1520-S.SNP.1:21579724 chr01:021579724 0 W/21579724-21579724 FN1520-S Single Base Substitution G-A INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2324.SNP.1:21588752 chr01:021588752 0 W/21588752-21588752 FN2324 SNP G -> A AC=1;AN=192;BQB=0.956897;DP=4620;DP4=2278,2123,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.52755e-08;MQSB=0.991635;RPB=0.108912;SGB=-13.64;VDB=0.062115;EFF=INTRON(MODIFIER||||940|LOC_Os01g38420|protein_coding|CODING|LOC_Os01g38420.1|2|1) FN2682-S.SNP.1:21588752 chr01:021588752 0 W/21588752-21588752 FN2682-S SNP G -> A AC=1;AN=200;BQB=0.997423;DP=4575;DP4=2288,2090,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05156e-07;MQSB=0.988508;RPB=0.879876;SGB=29.4541;VDB=0.982466;EFF=INTRON(MODIFIER||||940|LOC_Os01g38420|protein_coding|CODING|LOC_Os01g38420.1|2|1) W674-4-1.SNP.1:21588752 chr01:021588752 0 W/21588752-21588752 W674-4-1 Single Base Substitution G-A INTRON HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3369-S.SNP.1:21589003 chr01:021589003 0 W/21589003-21589003 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.624521;DP=3008;DP4=1634,1272,14,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.14529e-12;MQSB=0.99878;RPB=0.967665;SGB=116.569;VDB=0.53419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S382F|940|LOC_Os01g38420|protein_coding|CODING|LOC_Os01g38420.1|3|1) FN4153-S.SNP.1:21589402 chr01:021589402 0 W/21589402-21589402 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.957906;DP=2489;DP4=1237,1184,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=1.21314e-05;MQSB=0.654637;RPB=0.24639;SGB=74.528;VDB=0.266715;EFF=INTRON(MODIFIER||||940|LOC_Os01g38420|protein_coding|CODING|LOC_Os01g38420.1|3|1) FN2119-S.SNP.1:21591988 chr01:021591988 0 W/21591988-21591988 FN2119-S SNP C -> A AC=1;AN=168;BQB=0.570591;DP=1302;DP4=786,470,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.65115e-08;MQSB=0.801038;RPB=0.41684;SGB=2.75988;VDB=0.715136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.1:21595702 chr01:021595702 0 W/21595702-21595702 FN3424-S SNP C -> A AC=2;AN=184;BQB=0.999587;DP=3230;DP4=1586,1530,15,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.77875e-17;MQSB=0.727696;RPB=0.360904;SGB=88.5747;VDB=0.691746;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.1:21596421 chr01:021596421 0 W/21596421-21596421 FN4070-S SNP G -> A AC=1;AN=182;BQB=0.999496;DP=3290;DP4=1821,1401,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0077e-12;MQSB=0.755215;RPB=0.861296;SGB=84.7091;VDB=0.325946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.1:21607449 chr01:021607449 0 W/21607449-21607449 FN4156-S SNP T -> C AC=2;AN=170;BQB=0.909877;DP=2205;DP4=1039,1088,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.12371e-13;MQSB=0.969498;RPB=0.781519;SGB=101.184;VDB=0.991538;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S447|580|LOC_Os01g38440|protein_coding|CODING|LOC_Os01g38440.1|3|1) FN3296-S.SNP.1:21612467 chr01:021612467 0 W/21612467-21612467 FN3296-S SNP T -> G AC=1;AN=184;BQB=0.995489;DP=3107;DP4=1604,1271,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.43717e-07;MQSB=0.993416;RPB=0.999231;SGB=-0.806606;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.1:21612817 chr01:021612817 0 W/21612817-21612817 FN4253-S SNP T -> A AC=1;AN=170;BQB=0.968231;DP=2608;DP4=1015,1444,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.20471e-08;MQSB=0.994163;RPB=0.453124;SGB=65.6427;VDB=0.800896;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.1:21617622 chr01:021617622 0 W/21617622-21617622 FN413-S Single Base Substitution G-A INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3926-S.SNP.1:21618097 chr01:021618097 0 W/21618097-21618097 FN3926-S SNP A -> G AC=1;AN=156;BQB=0.781568;DP=2470;DP4=1398,895,8,11;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=9.47511e-12;MQSB=0.537362;RPB=0.824023;SGB=7.56394;VDB=0.546351;EFF=INTERGENIC(MODIFIER||||||||||1) FN-205.SNP.1:21621728 chr01:021621728 0 W/21621728-21621728 FN-205 Single Base Substitution G-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-205.SNP.1:21621729 chr01:021621729 0 W/21621729-21621729 FN-205 Single Base Substitution A-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3531-S.SNP.1:21623612 chr01:021623612 0 W/21623612-21623612 FN3531-S SNP A -> T AC=1;AN=188;BQB=0.992939;DP=2360;DP4=1228,1012,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58831e-07;MQSB=0.907131;RPB=0.980023;SGB=28.8977;VDB=0.539479;EFF=UTR_3_PRIME(MODIFIER||352||176|LOC_Os01g38480|protein_coding|CODING|LOC_Os01g38480.1|5|1),UTR_3_PRIME(MODIFIER||352||140|LOC_Os01g38480|protein_coding|CODING|LOC_Os01g38480.2|4|1),UTR_3_PRIME(MODIFIER||533||139|LOC_Os01g38480|protein_coding|CODING|LOC_Os01g38480.3|5|1) FN2729-S.SNP.1:21632839 chr01:021632839 0 W/21632839-21632839 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.385968;DP=4869;DP4=2358,2277,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2405e-16;MQSB=0.959592;RPB=0.149111;SGB=83.5316;VDB=0.893946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.1:21633314 chr01:021633314 0 W/21633314-21633314 FN3668-S SNP G -> A AC=2;AN=190;BQB=0.907793;DP=2725;DP4=1244,1369,8,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.08987e-14;MQSB=0.988329;RPB=0.999939;SGB=99.1879;VDB=0.509291;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.1:21648612 chr01:021648612 0 W/21648612-21648612 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.778221;DP=2970;DP4=1487,1399,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0218855;MQB=0.0383672;MQSB=0.221295;RPB=0.968446;SGB=34.4498;VDB=0.096652;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q1132*|2026|LOC_Os01g38540|protein_coding|CODING|LOC_Os01g38540.1|2|1) FN573-S.SNP.1:21652474 chr01:021652474 0 W/21652474-21652474 FN573-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g38550 transposon protein, putative, unclassified, expressed SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN4109-S.SNP.1:21653585 chr01:021653585 0 W/21653585-21653585 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.998228;DP=4381;DP4=1332,2903,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=29;MQ0F=0.186715;MQB=0.964934;MQSB=0;RPB=0.213142;SGB=62.1548;VDB=0.38995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R488C|1043|LOC_Os01g38550|protein_coding|CODING|LOC_Os01g38550.1|2|1) FN4109-S.SNP.1:21653586 chr01:021653586 0 W/21653586-21653586 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.916768;DP=4407;DP4=1315,2791,13,84;HOB=6.03792e-05;ICB=0.000121422;MQ=29;MQ0F=0.181756;MQB=1.42193e-22;MQSB=0;RPB=0.00575556;SGB=-2568.48;VDB=0.00474838;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A487|1043|LOC_Os01g38550|protein_coding|CODING|LOC_Os01g38550.1|2|1) FN897-S.SNP.1:21655012 chr01:021655012 0 W/21655012-21655012 FN897-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN_776-5-1.SNP.1:21659218 chr01:021659218 0 W/21659218-21659218 FN_776-5-1 Single Base Substitution T-G Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2691-S.SNP.1:21659948 chr01:021659948 0 W/21659948-21659948 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.120083;DP=4337;DP4=2268,1775,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.02281e-11;MQSB=0.913406;RPB=0.697521;SGB=45.1159;VDB=0.795035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.1:21665177 chr01:021665177 0 W/21665177-21665177 FN2589-S SNP T -> C AC=1;AN=198;BQB=0.924478;DP=4006;DP4=1613,2147,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.79003e-06;MQSB=0.645343;RPB=0.905652;SGB=43.7442;VDB=0.269663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.1:21673211 chr01:021673211 0 W/21673211-21673211 FN3905-S SNP C -> A AC=2;AN=156;BQB=0.193664;DP=2505;DP4=1317,1091,12,10;HOB=0.0253123;ICB=0.493673;MQ=49;MQ0F=0;MQB=4.03148e-08;MQSB=0.988571;RPB=0.190522;SGB=90.7616;VDB=0.317431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.1:21678082 chr01:021678082 0 W/21678082-21678082 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.948327;DP=2593;DP4=1264,1231,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.29823e-08;MQSB=0.904361;RPB=0.589593;SGB=58.2031;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.1:21678456 chr01:021678456 0 W/21678456-21678456 FN1642-S Single Base Substitution A-G INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2375.SNP.1:21693562 chr01:021693562 0 W/21693562-21693562 FN2375 SNP A -> G AC=1;AN=192;BQB=0.274791;DP=5005;DP4=2267,2409,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.35692e-12;MQSB=0.965357;RPB=0.960131;SGB=94.8539;VDB=0.0916874;EFF=INTERGENIC(MODIFIER||||||||||1) FN1000-S.SNP.1:21699695 chr01:021699695 0 W/21699695-21699695 FN1000-S Single Base Substitution C-A INTRON HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-288.SNP.1:21700157 chr01:021700157 0 W/21700157-21700157 FN-288 Single Base Substitution C-G INTRON HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN3764-S.SNP.1:21705380 chr01:021705380 0 W/21705380-21705380 FN3764-S SNP C -> A AC=2;AN=190;BQB=0.989012;DP=3370;DP4=1630,1610,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000296736;MQB=1.10435e-18;MQSB=0.717413;RPB=0.86324;SGB=103.624;VDB=0.249172;EFF=INTERGENIC(MODIFIER||||||||||1) FN_826-4-1.SNP.1:21708757 chr01:021708757 0 W/21708757-21708757 FN_826-4-1 Single Base Substitution G-A Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN_826-4-1.SNP.1:21708760 chr01:021708760 0 W/21708760-21708760 FN_826-4-1 Single Base Substitution G-C Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN1190-S.SNP.1:21709566 chr01:021709566 0 W/21709566-21709566 FN1190-S Single Base Substitution A-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1190-S.SNP.1:21709567 chr01:021709567 0 W/21709567-21709567 FN1190-S Single Base Substitution C-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. W278-3-1.SNP.1:21711375 chr01:021711375 0 W/21711375-21711375 W278-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN687-S.SNP.1:21711852 chr01:021711852 0 W/21711852-21711852 FN687-S Single Base Substitution T-C INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-104.SNP.1:21712202 chr01:021712202 0 W/21712202-21712202 FN-104 Single Base Substitution G-C INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN2572-S.SNP.1:21716978 chr01:021716978 0 W/21716978-21716978 FN2572-S SNP T -> C AC=1;AN=198;BQB=0.513642;DP=4385;DP4=1976,2176,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.59045e-10;MQSB=0.992318;RPB=0.892828;SGB=47.3393;VDB=0.244842;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.1:21717642 chr01:021717642 0 W/21717642-21717642 FN-248 Single Base Substitution A-G INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3831-S.SNP.1:21719426 chr01:021719426 0 W/21719426-21719426 FN3831-S SNP A -> G AC=1;AN=190;BQB=0.994434;DP=2783;DP4=1276,1395,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.16848e-07;MQSB=0.875642;RPB=0.457459;SGB=53.6492;VDB=0.0309482;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.1:21728923 chr01:021728923 0 W/21728923-21728923 FN-203 Single Base Substitution C-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. W577-3-1.SNP.1:21736103 chr01:021736103 0 W/21736103-21736103 W577-3-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g38700 nucleic acid binding protein, putative, expressed SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN1642-S.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN1642-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2209-S.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN2209-S SNP C -> A AC=2;AN=190;BQB=0.577007;DP=3836;DP4=1968,1614,13,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43286e-09;MQSB=0.539671;RPB=0.896158;SGB=80.9724;VDB=0.881903;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G145|277|LOC_Os01g38710|protein_coding|CODING|LOC_Os01g38710.1|1|1) FN2366.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN2366 SNP C -> A AC=2;AN=192;BQB=0.0781152;DP=4754;DP4=2364,2099,15,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.02322e-15;MQSB=0.848982;RPB=0.872234;SGB=96.8096;VDB=0.939434;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G145|277|LOC_Os01g38710|protein_coding|CODING|LOC_Os01g38710.1|1|1) FN4132-S.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN4132-S SNP C -> A AC=1;AN=182;BQB=0.992051;DP=3557;DP4=1709,1757,15,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.32432e-14;MQSB=0.99999;RPB=0.987381;SGB=102.753;VDB=0.412603;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G145|277|LOC_Os01g38710|protein_coding|CODING|LOC_Os01g38710.1|1|1) FN679-S.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN679-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN882-S.SNP.1:21738075 chr01:021738075 0 W/21738075-21738075 FN882-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN1488-S.SNP.1:21742558 chr01:021742558 0 W/21742558-21742558 FN1488-S Single Base Substitution C-T INTRON HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2681-S.SNP.1:21742558 chr01:021742558 0 W/21742558-21742558 FN2681-S SNP C -> T AC=2;AN=200;BQB=0.888315;DP=4969;DP4=2601,2095,21,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.47521e-24;MQSB=0.987168;RPB=0.991021;SGB=144.819;VDB=0.673754;EFF=INTRON(MODIFIER||||359|LOC_Os01g38720|protein_coding|CODING|LOC_Os01g38720.1|1|1) FN989-S.SNP.1:21742558 chr01:021742558 0 W/21742558-21742558 FN989-S Single Base Substitution C-T INTRON HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1237-S.SNP.1:21745466 chr01:021745466 0 W/21745466-21745466 FN1237-S Single Base Substitution C-G INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1759-S.SNP.1:21765491 chr01:021765491 0 W/21765491-21765491 FN1759-S SNP G -> C AC=1;AN=188;BQB=0.978822;DP=3070;DP4=1330,1703,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0527687;MQB=0.47064;MQSB=0.00168013;RPB=0.650795;SGB=58.0655;VDB=0.385225;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.1:21765505 chr01:021765505 0 W/21765505-21765505 FN1206-S Single Base Substitution G-A INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN2417.SNP.1:21774970 chr01:021774970 0 W/21774970-21774970 FN2417 SNP A -> C AC=1;AN=200;BQB=0.853743;DP=4283;DP4=2043,1978,8,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00560355;MQB=0.0112889;MQSB=2.10389e-16;RPB=0.998789;SGB=77.2904;VDB=0.752894;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L409|547|LOC_Os01g38820|protein_coding|CODING|LOC_Os01g38820.1|2|1) FN2531-S.SNP.1:21781736 chr01:021781736 0 W/21781736-21781736 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.998823;DP=2935;DP4=1384,1276,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0575809;MQB=0.27053;MQSB=0.00529684;RPB=0.884493;SGB=35.7638;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.1:21782304 chr01:021782304 0 W/21782304-21782304 FN2106-S SNP G -> A AC=1;AN=168;BQB=0.0490836;DP=3295;DP4=1584,1677,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18935e-08;MQSB=0.533682;RPB=0.971016;SGB=-13.2184;VDB=0.956788;EFF=INTERGENIC(MODIFIER||||||||||1) W706-3-1.SNP.1:21784575 chr01:021784575 0 W/21784575-21784575 W706-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN4040-S.SNP.1:21786480 chr01:021786480 0 W/21786480-21786480 FN4040-S SNP G -> A AC=1;AN=168;BQB=0.949692;DP=2884;DP4=1479,1274,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.88505e-08;MQSB=0.999527;RPB=0.590634;SGB=34.748;VDB=0.649234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.1:21792679 chr01:021792679 0 W/21792679-21792679 FN1630-S Single Base Substitution G-A INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1300-S.SNP.1:21795728 chr01:021795728 0 W/21795728-21795728 FN1300-S Single Base Substitution A-G INTRON HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3947-S.SNP.1:21796666 chr01:021796666 0 W/21796666-21796666 FN3947-S SNP T -> A AC=1;AN=168;BQB=0.299133;DP=3297;DP4=1347,1798,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05117e-11;MQSB=0.962228;RPB=0.946886;SGB=48.9237;VDB=0.7769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N157Y|385|LOC_Os01g38850|protein_coding|CODING|LOC_Os01g38850.1|1|1) FN1526-S.SNP.1:21801752 chr01:021801752 0 W/21801752-21801752 FN1526-S Single Base Substitution T-A INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN2126-S.SNP.1:21804099 chr01:021804099 0 W/21804099-21804099 FN2126-S SNP T -> A AC=1;AN=168;BQB=0.328556;DP=3052;DP4=1567,1433,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87992e-07;MQSB=0.981855;RPB=0.961543;SGB=5.62151;VDB=0.171568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.1:21822282 chr01:021822282 0 W/21822282-21822282 FN2471 SNP A -> G AC=1;AN=200;BQB=0.632766;DP=4918;DP4=2420,2272,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.6633e-13;MQSB=0.191412;RPB=0.99238;SGB=100.316;VDB=0.852223;EFF=INTRON(MODIFIER||||362|LOC_Os01g38890|protein_coding|CODING|LOC_Os01g38890.1|6|1) FN3925-S.SNP.1:21826309 chr01:021826309 0 W/21826309-21826309 FN3925-S SNP G -> A AC=1;AN=156;BQB=0.961568;DP=2565;DP4=1338,1149,8,10;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=3.89502e-09;MQSB=0.98898;RPB=0.973028;SGB=73.2838;VDB=0.849522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.1:21826616 chr01:021826616 0 W/21826616-21826616 FN3332-S SNP G -> A AC=1;AN=184;BQB=0.898055;DP=3671;DP4=2070,1496,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.89804e-08;MQSB=0.957164;RPB=0.999977;SGB=62.3078;VDB=0.754985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.1:21831597 chr01:021831597 0 W/21831597-21831597 FN1103-S Single Base Substitution G-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2311.SNP.1:21831710 chr01:021831710 0 W/21831710-21831710 FN2311 SNP T -> C AC=1;AN=192;BQB=0.99061;DP=4618;DP4=2035,2265,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0019489;MQB=1.14653e-05;MQSB=0.648009;RPB=0.999327;SGB=71.8591;VDB=0.348303;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.1:21839639 chr01:021839639 0 W/21839639-21839639 FN931-S Single Base Substitution G-A INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN1109-S.SNP.1:21845423 chr01:021845423 0 W/21845423-21845423 FN1109-S Single Base Substitution A-T INTRON HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1423-S.SNP.1:21847884 chr01:021847884 0 W/21847884-21847884 FN1423-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1667-S.SNP.1:21855993 chr01:021855993 0 W/21855993-21855993 FN1667-S SNP A -> T AC=2;AN=188;BQB=0.465467;DP=3465;DP4=1730,1682,22,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.77816e-18;MQSB=0.999854;RPB=0.796885;SGB=-1.41739;VDB=0.909042;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.1:21857278 chr01:021857278 0 W/21857278-21857278 FN1162-S Single Base Substitution G-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3466-S.SNP.1:21859774 chr01:021859774 0 W/21859774-21859774 FN3466-S SNP T -> C AC=1;AN=184;BQB=0.952465;DP=3081;DP4=1359,1602,8,20;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.35631e-16;MQSB=0.957869;RPB=0.327461;SGB=121.091;VDB=0.222892;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.1:21860092 chr01:021860092 0 W/21860092-21860092 FN-147 Single Base Substitution C-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2335.SNP.1:21862497 chr01:021862497 0 W/21862497-21862497 FN2335 SNP C -> T AC=1;AN=192;BQB=0.794373;DP=5040;DP4=2557,1959,18,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.00794e-13;MQSB=0.980618;RPB=0.496238;SGB=-6.30345;VDB=0.976954;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.1:21863311 chr01:021863311 0 W/21863311-21863311 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3859-S.SNP.1:21866068 chr01:021866068 0 W/21866068-21866068 FN3859-S SNP G -> A AC=1;AN=156;BQB=0.98324;DP=1536;DP4=726,737,5,2;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=0.00176856;MQSB=0.75888;RPB=0.424618;SGB=25.2211;VDB=0.17748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.1:21867715 chr01:021867715 0 W/21867715-21867715 FN2673-S SNP G -> A AC=2;AN=200;BQB=0.488976;DP=4445;DP4=2000,2025,44,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.72037e-39;MQSB=0.57447;RPB=0.806221;SGB=320.372;VDB=0.29134;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.1:21872308 chr01:021872308 0 W/21872308-21872308 FN3759-S SNP T -> C AC=1;AN=190;BQB=0.7851;DP=2620;DP4=1162,1353,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.18102e-05;MQSB=0.912715;RPB=0.946084;SGB=49.0954;VDB=0.184576;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.1:21874421 chr01:021874421 0 W/21874421-21874421 FN815-S Single Base Substitution G-A INTERGENIC HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3610-S.SNP.1:21874500 chr01:021874500 0 W/21874500-21874500 FN3610-S SNP C -> T AC=2;AN=190;BQB=0.9759;DP=3460;DP4=1541,1707,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71183e-17;MQSB=0.907203;RPB=0.450346;SGB=103.624;VDB=0.00245946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.1:21875200 chr01:021875200 0 W/21875200-21875200 FN3825-S SNP T -> C AC=1;AN=190;BQB=0.613396;DP=3007;DP4=1435,1456,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48264e-09;MQSB=0.879863;RPB=0.697362;SGB=38.983;VDB=0.242015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.1:21876616 chr01:021876616 0 W/21876616-21876616 FN1064-S Single Base Substitution G-A INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1243-S.SNP.1:21886022 chr01:021886022 0 W/21886022-21886022 FN1243-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN580-S.SNP.1:21888604 chr01:021888604 0 W/21888604-21888604 FN580-S Single Base Substitution G-A INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2327.SNP.1:21891792 chr01:021891792 0 W/21891792-21891792 FN2327 SNP C -> T AC=1;AN=192;BQB=0.151377;DP=5040;DP4=2394,2267,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95357e-09;MQSB=0.990336;RPB=0.636993;SGB=50.4731;VDB=0.596295;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.1:21901502 chr01:021901502 0 W/21901502-21901502 FN2547-S SNP A -> G AC=1;AN=198;BQB=0.948623;DP=4404;DP4=2180,2017,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51424e-05;MQSB=0.815332;RPB=0.580118;SGB=25.7687;VDB=0.823921;EFF=INTRON(MODIFIER||||628|LOC_Os01g38980|protein_coding|CODING|LOC_Os01g38980.1|4|1),INTRON(MODIFIER||||569|LOC_Os01g38980|protein_coding|CODING|LOC_Os01g38980.2|4|1) FN3828-S.SNP.1:21914907 chr01:021914907 0 W/21914907-21914907 FN3828-S SNP G -> A AC=2;AN=190;BQB=0.820232;DP=2390;DP4=1068,1199,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.25442e-17;MQSB=0.542167;RPB=0.572707;SGB=103.624;VDB=0.0428536;EFF=INTERGENIC(MODIFIER||||||||||1) FN-38.SNP.1:21915105 chr01:021915105 0 W/21915105-21915105 FN-38 Single Base Substitution T-C INTERGENIC Homo SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN2267-S.SNP.1:21920074 chr01:021920074 0 W/21920074-21920074 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.510596;DP=5464;DP4=2499,2653,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41571e-07;MQSB=0.993955;RPB=0.999999;SGB=23.6597;VDB=0.895933;EFF=INTRON(MODIFIER||||340|LOC_Os01g38990|protein_coding|CODING|LOC_Os01g38990.1|4|1) FN590-S.SNP.1:21920463 chr01:021920463 0 W/21920463-21920463 FN590-S Single Base Substitution A-T INTRON HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN590-S.SNP.1:21920464 chr01:021920464 0 W/21920464-21920464 FN590-S Single Base Substitution G-T INTRON HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN430-S.SNP.1:21926167 chr01:021926167 0 W/21926167-21926167 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g39000 ZmGR2c, putative, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN-84.SNP.1:21934530 chr01:021934530 0 W/21934530-21934530 FN-84 Single Base Substitution T-C INTRON HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN3105-S.SNP.1:21939212 chr01:021939212 0 W/21939212-21939212 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.445132;DP=2973;DP4=1285,1602,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00188062;MQSB=0.371552;RPB=0.659449;SGB=39.699;VDB=0.187503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G116D|402|LOC_Os01g39020|protein_coding|CODING|LOC_Os01g39020.1|1|1) FN973-S.SNP.1:21949634 chr01:021949634 0 W/21949634-21949634 FN973-S Single Base Substitution C-A INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN973-S.SNP.1:21949635 chr01:021949635 0 W/21949635-21949635 FN973-S Single Base Substitution C-T INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN4344-S.SNP.1:21968749 chr01:021968749 0 W/21968749-21968749 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.913068;DP=2779;DP4=1457,1226,13,4;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=2.01005e-05;MQSB=0.693074;RPB=0.264576;SGB=70.0854;VDB=0.340796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.1:21969110 chr01:021969110 0 W/21969110-21969110 FN3886-S SNP T -> C AC=1;AN=158;BQB=0.989674;DP=2880;DP4=1034,1581,12,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.40165e-12;MQSB=0.341281;RPB=0.651787;SGB=13.0417;VDB=0.471943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.1:21980810 chr01:021980810 0 W/21980810-21980810 FN2292 SNP C -> T AC=1;AN=192;BQB=0.616844;DP=4917;DP4=2451,2199,20,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.04645e-14;MQSB=0.805488;RPB=0.514455;SGB=54.5574;VDB=0.996577;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.1:21985779 chr01:021985779 0 W/21985779-21985779 FN706-S Single Base Substitution T-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN706-S.SNP.1:21985780 chr01:021985780 0 W/21985780-21985780 FN706-S Single Base Substitution T-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-162.SNP.1:21986547 chr01:021986547 0 W/21986547-21986547 FN-162 Single Base Substitution G-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN3326-S.SNP.1:21993751 chr01:021993751 0 W/21993751-21993751 FN3326-S SNP A -> C AC=2;AN=184;BQB=0.41961;DP=3191;DP4=1622,1413,16,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.80014e-16;MQSB=0.890101;RPB=0.661108;SGB=76.2326;VDB=0.230632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aCc|N62T|537|LOC_Os01g39110|protein_coding|CODING|LOC_Os01g39110.1|1|1) FN3556-S.SNP.1:21995578 chr01:021995578 0 W/21995578-21995578 FN3556-S SNP C -> G AC=1;AN=188;BQB=0.972936;DP=2608;DP4=1526,993,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21617e-11;MQSB=0.921376;RPB=0.859599;SGB=89.8686;VDB=0.226438;EFF=INTRON(MODIFIER||||537|LOC_Os01g39110|protein_coding|CODING|LOC_Os01g39110.1|2|1) FN3556-S.SNP.1:21995936 chr01:021995936 0 W/21995936-21995936 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.261176;DP=3212;DP4=1528,1556,16,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.1142e-07;MQSB=0.74818;RPB=0.665138;SGB=67.8739;VDB=0.131345;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L327|537|LOC_Os01g39110|protein_coding|CODING|LOC_Os01g39110.1|3|1) FN1746-S.SNP.1:22000475 chr01:022000475 0 W/22000475-22000475 FN1746-S SNP C -> A AC=2;AN=188;BQB=0.945636;DP=2496;DP4=953,1486,6,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.25442e-15;MQSB=0.817108;RPB=0.365241;SGB=-43.7584;VDB=0.29031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.1:22001263 chr01:022001263 0 W/22001263-22001263 FN2474 SNP G -> A AC=1;AN=200;BQB=0.26832;DP=3135;DP4=1514,1463,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000278234;MQSB=4.4455e-05;RPB=0.949545;SGB=35.8441;VDB=0.785665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.1:22009462 chr01:022009462 0 W/22009462-22009462 FN3446-S SNP T -> A AC=1;AN=184;BQB=0.894453;DP=2431;DP4=1204,1075,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.21359e-07;MQSB=0.989716;RPB=0.949261;SGB=39.699;VDB=0.146496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.1:22013508 chr01:022013508 0 W/22013508-22013508 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.000116034;DP=3114;DP4=1727,1343,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.58627e-06;MQSB=0.842613;RPB=0.410672;SGB=-16.2342;VDB=0.190985;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.1:22019656 chr01:022019656 0 W/22019656-22019656 W138-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1572-S.SNP.1:22023748 chr01:022023748 0 W/22023748-22023748 FN1572-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os01g39134 EF hand family protein, putative, expressed SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3360-S.SNP.1:22025261 chr01:022025261 0 W/22025261-22025261 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.928217;DP=3058;DP4=1623,1299,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.06082e-12;MQSB=0.982421;RPB=0.805717;SGB=80.3949;VDB=0.934759;EFF=INTRON(MODIFIER||||396|LOC_Os01g39134|protein_coding|CODING|LOC_Os01g39134.1|3|1) FN1470-S.SNP.1:22035018 chr01:022035018 0 W/22035018-22035018 FN1470-S Single Base Substitution A-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2472.SNP.1:22035399 chr01:022035399 0 W/22035399-22035399 FN2472 SNP C -> T AC=1;AN=200;BQB=0.938286;DP=5054;DP4=2449,2318,12,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.5492e-07;MQSB=0.860559;RPB=0.951045;SGB=11.0951;VDB=0.829364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.1:22051332 chr01:022051332 0 W/22051332-22051332 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.0660879;DP=4205;DP4=1832,2063,27,30;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.0680143;MQB=0.955158;MQSB=0;RPB=0.996656;SGB=130.923;VDB=0.221763;EFF=INTRON(MODIFIER||||654|LOC_Os01g39190|protein_coding|CODING|LOC_Os01g39190.1|4|1) W22-2-1.SNP.1:22052287 chr01:022052287 0 W/22052287-22052287 W22-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2638-S.SNP.1:22053189 chr01:022053189 0 W/22053189-22053189 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.999759;DP=4422;DP4=1984,2213,14,9;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0829941;MQB=0.442398;MQSB=2.34263e-05;RPB=0.92767;SGB=45.1159;VDB=0.837546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.1:22054387 chr01:022054387 0 W/22054387-22054387 FN3992-S SNP C -> T AC=1;AN=168;BQB=0.899361;DP=2785;DP4=1323,1341,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.101257;MQB=0.239038;MQSB=9.0321e-24;RPB=0.414228;SGB=47.7421;VDB=0.0706833;EFF=INTRON(MODIFIER||||1409|LOC_Os01g39200|protein_coding|CODING|LOC_Os01g39200.1|1|1) FN2665-S.SNP.1:22060509 chr01:022060509 0 W/22060509-22060509 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.993782;DP=4636;DP4=2436,1969,13,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00215703;MQB=3.8254e-08;MQSB=0.795302;RPB=0.793501;SGB=58.2954;VDB=0.750798;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.1:22065278 chr01:022065278 0 W/22065278-22065278 FN706-S Single Base Substitution T-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN4166-S.SNP.1:22070551 chr01:022070551 0 W/22070551-22070551 FN4166-S SNP G -> A AC=1;AN=170;BQB=0.912145;DP=2838;DP4=1560,1206,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0204369;MQB=0.086932;MQSB=6.30584e-44;RPB=0.338383;SGB=38.987;VDB=0.755657;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.1:22070551 chr01:022070551 0 W/22070551-22070551 FN632-S Single Base Substitution G-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2374.SNP.1:22075679 chr01:022075679 0 W/22075679-22075679 FN2374 SNP G -> T AC=2;AN=192;BQB=0.717427;DP=5015;DP4=2197,2460,17,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000199402;MQB=1.91721e-19;MQSB=0.794216;RPB=0.649519;SGB=40.2061;VDB=0.826532;EFF=INTRON(MODIFIER||||709|LOC_Os01g39250|protein_coding|CODING|LOC_Os01g39250.1|2|1) FN893-S.SNP.1:22081116 chr01:022081116 0 W/22081116-22081116 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1468-S.SNP.1:22090314 chr01:022090314 0 W/22090314-22090314 FN1468-S Single Base Substitution C-A INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1297-S.SNP.1:22092088 chr01:022092088 0 W/22092088-22092088 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1297-S.SNP.1:22092089 chr01:022092089 0 W/22092089-22092089 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2630-S.SNP.1:22105790 chr01:022105790 0 W/22105790-22105790 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.95621;DP=4874;DP4=2315,2273,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74525e-13;MQSB=0.478887;RPB=0.997427;SGB=-9.47921;VDB=0.00436234;EFF=INTERGENIC(MODIFIER||||||||||1) 707-6.SNP.1:22113496 chr01:022113496 0 W/22113496-22113496 707-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. FN3467-S.SNP.1:22121605 chr01:022121605 0 W/22121605-22121605 FN3467-S SNP T -> A AC=1;AN=184;BQB=0.879974;DP=2356;DP4=1168,1099,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.83474e-05;MQSB=0.996874;RPB=0.392695;SGB=13.188;VDB=0.448526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L35H|806|LOC_Os01g39310|protein_coding|CODING|LOC_Os01g39310.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L35H|710|LOC_Os01g39310|protein_coding|CODING|LOC_Os01g39310.3|2|1) FN1477-S.SNP.1:22124108 chr01:022124108 0 W/22124108-22124108 FN1477-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2753-S.SNP.1:22126670 chr01:022126670 0 W/22126670-22126670 FN2753-S SNP T -> A AC=1;AN=200;BQB=0.950883;DP=5209;DP4=2571,2408,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.55804e-16;MQSB=0.979377;RPB=0.726853;SGB=55.5366;VDB=0.467402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D473E|806|LOC_Os01g39310|protein_coding|CODING|LOC_Os01g39310.1|17|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D473E|710|LOC_Os01g39310|protein_coding|CODING|LOC_Os01g39310.3|17|1) FN-105.SNP.1:22127996 chr01:022127996 0 W/22127996-22127996 FN-105 Single Base Substitution T-C INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN3378-S.SNP.1:22135484 chr01:022135484 0 W/22135484-22135484 FN3378-S SNP A -> G AC=1;AN=184;BQB=0.597356;DP=2959;DP4=1286,1522,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03439e-06;MQSB=0.999928;RPB=0.982005;SGB=62.3078;VDB=0.816693;EFF=INTRON(MODIFIER||||82|LOC_Os01g39320|protein_coding|CODING|LOC_Os01g39320.1|1|1) FN3396-S.SNP.1:22136096 chr01:022136096 0 W/22136096-22136096 FN3396-S SNP A -> T AC=1;AN=184;BQB=0.719264;DP=3154;DP4=1330,1632,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.73359e-14;MQSB=0.977245;RPB=0.897935;SGB=43.4494;VDB=0.469903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.1:22136097 chr01:022136097 0 W/22136097-22136097 FN3396-S SNP G -> A AC=1;AN=184;BQB=0.995118;DP=3164;DP4=1441,1653,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13526e-14;MQSB=0.999816;RPB=0.996188;SGB=93.9603;VDB=0.58736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.1:22137288 chr01:022137288 0 W/22137288-22137288 FN1566-S Single Base Substitution T-C INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2454.SNP.1:22138667 chr01:022138667 0 W/22138667-22138667 FN2454 SNP C -> T AC=1;AN=200;BQB=0.110005;DP=3749;DP4=1904,1444,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000266738;MQB=6.03657e-05;MQSB=0.936019;RPB=0.803964;SGB=49.6594;VDB=0.598947;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P137L|454|LOC_Os01g39330|protein_coding|CODING|LOC_Os01g39330.1|2|1) FN589-S.SNP.1:22146113 chr01:022146113 0 W/22146113-22146113 FN589-S Single Base Substitution A-G INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1173-S.SNP.1:22146594 chr01:022146594 0 W/22146594-22146594 FN1173-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g39350 protein kinase domain containing protein, expressed SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN3897-S.SNP.1:22150845 chr01:022150845 0 W/22150845-22150845 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.219352;DP=2537;DP4=1254,1152,14,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00197083;MQB=1.42306e-08;MQSB=0.672439;RPB=0.520316;SGB=40.4048;VDB=0.959984;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.1:22151523 chr01:022151523 0 W/22151523-22151523 FN484-S Single Base Substitution C-T INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN4052-S.SNP.1:22153476 chr01:022153476 0 W/22153476-22153476 FN4052-S SNP C -> T AC=2;AN=168;BQB=0.882574;DP=2593;DP4=1228,1233,23,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.28121e-21;MQSB=0.925633;RPB=0.746376;SGB=197.417;VDB=0.989345;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H321Y|569|LOC_Os01g39360|protein_coding|CODING|LOC_Os01g39360.1|5|1) FN2352.SNP.1:22158244 chr01:022158244 0 W/22158244-22158244 FN2352 SNP G -> A AC=2;AN=192;BQB=0.732395;DP=4709;DP4=2240,2132,14,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.79398e-18;MQSB=0.97844;RPB=0.981935;SGB=90.4583;VDB=0.178912;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F800|1809|LOC_Os01g39370|protein_coding|CODING|LOC_Os01g39370.1|3|1) FN1537-S.SNP.1:22158485 chr01:022158485 0 W/22158485-22158485 FN1537-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g39370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2434.SNP.1:22158918 chr01:022158918 0 W/22158918-22158918 FN2434 SNP T -> C AC=1;AN=200;BQB=0.92902;DP=4838;DP4=2558,2021,9,5;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0403059;MQB=0.0510488;MQSB=0;RPB=0.602978;SGB=58.8698;VDB=0.781526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S576G|1809|LOC_Os01g39370|protein_coding|CODING|LOC_Os01g39370.1|3|1) FN2203-S.SNP.1:22159421 chr01:022159421 0 W/22159421-22159421 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.336766;DP=4562;DP4=2071,2079,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000657606;MQB=3.34732e-07;MQSB=0.094305;RPB=0.998547;SGB=-10.4526;VDB=0.934827;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W430*|1809|LOC_Os01g39370|protein_coding|CODING|LOC_Os01g39370.1|2|1);LOF=(LOC_Os01g39370|LOC_Os01g39370|1|1.00);NMD=(LOC_Os01g39370|LOC_Os01g39370|1|1.00) FN2399.SNP.1:22164655 chr01:022164655 0 W/22164655-22164655 FN2399 SNP A -> G AC=2;AN=200;BQB=0.948453;DP=4602;DP4=2172,2030,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.40632e-19;MQSB=0.945395;RPB=0.37538;SGB=169.394;VDB=0.919728;EFF=UTR_3_PRIME(MODIFIER||159||1168|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.3|30|1),INTRON(MODIFIER||||1235|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.1|30|1),INTRON(MODIFIER||||1176|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.2|29|1) FN1085-S.SNP.1:22164879 chr01:022164879 0 W/22164879-22164879 FN1085-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g39380 SCD1, putative, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3927-S.SNP.1:22165958 chr01:022165958 0 W/22165958-22165958 FN3927-S SNP T -> C AC=1;AN=158;BQB=0.673132;DP=2376;DP4=1282,993,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.08998e-08;MQSB=0.999348;RPB=0.976704;SGB=44.1818;VDB=0.959025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q1022R|1235|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.1|27|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q991R|1176|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.2|26|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q1022R|1168|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.3|27|1) FN2361.SNP.1:22171391 chr01:022171391 0 W/22171391-22171391 FN2361 SNP C -> T AC=1;AN=192;BQB=0.435229;DP=5064;DP4=2374,2315,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.91006e-10;MQSB=0.914836;RPB=0.905572;SGB=8.91915;VDB=0.632406;EFF=INTRON(MODIFIER||||1235|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.1|19|1),INTRON(MODIFIER||||1176|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.2|18|1),INTRON(MODIFIER||||1168|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.3|19|1) FN3698-S.SNP.1:22178991 chr01:022178991 0 W/22178991-22178991 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.0560222;DP=3001;DP4=1439,1455,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0113281;MQSB=0.999861;RPB=0.215167;SGB=44.5415;VDB=0.0677962;EFF=INTRON(MODIFIER||||1235|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.1|1|1),INTRON(MODIFIER||||1176|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.2|1|1),INTRON(MODIFIER||||1168|LOC_Os01g39380|protein_coding|CODING|LOC_Os01g39380.3|1|1) FN1326-S.SNP.1:22191320 chr01:022191320 0 W/22191320-22191320 FN1326-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3651-S.SNP.1:22191361 chr01:022191361 0 W/22191361-22191361 FN3651-S SNP A -> G AC=1;AN=190;BQB=0.766178;DP=3201;DP4=1606,1497,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00291537;MQSB=8.36015e-21;RPB=0.800544;SGB=13.4442;VDB=0.255089;EFF=UTR_3_PRIME(MODIFIER||3262||206|LOC_Os01g39385|protein_coding|CODING|LOC_Os01g39385.1|1|1) FN402-S.SNP.1:22196088 chr01:022196088 0 W/22196088-22196088 FN402-S Single Base Substitution A-T INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN990-S.SNP.1:22201876 chr01:022201876 0 W/22201876-22201876 FN990-S Single Base Substitution A-G INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-200.SNP.1:22202608 chr01:022202608 0 W/22202608-22202608 FN-200 Single Base Substitution A-G INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN889-S.SNP.1:22203196 chr01:022203196 0 W/22203196-22203196 FN889-S Single Base Substitution A-C INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2781-S.SNP.1:22206144 chr01:022206144 0 W/22206144-22206144 FN2781-S SNP G -> A AC=2;AN=198;BQB=0.775386;DP=2659;DP4=724,1740,4,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.87961e-12;MQSB=0.932306;RPB=0.00176867;SGB=81.7147;VDB=0.00422778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:22206145 chr01:022206145 0 W/22206145-22206145 FN2781-S SNP C -> A AC=2;AN=198;BQB=0.637736;DP=2656;DP4=734,1785,4,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.89001e-13;MQSB=0.85537;RPB=0.00759258;SGB=65.3149;VDB=0.00723504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.1:22209076 chr01:022209076 0 W/22209076-22209076 FN-296 Single Base Substitution A-G INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN1071-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN1071-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1150-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN1150-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1335-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN1335-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1647-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN1647-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1692-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN1692-S SNP C -> G AC=2;AN=188;BQB=0.231525;DP=3364;DP4=1661,1660,16,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.49946e-11;MQSB=0.984567;RPB=0.779257;SGB=-8.48022;VDB=0.958827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D135H|559|LOC_Os01g39420|protein_coding|CODING|LOC_Os01g39420.1|2|1) FN2220-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN2220-S SNP C -> G AC=1;AN=190;BQB=0.660197;DP=4571;DP4=2187,2058,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.66894e-08;MQSB=0.288544;RPB=0.50105;SGB=14.9883;VDB=0.982203;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D135H|559|LOC_Os01g39420|protein_coding|CODING|LOC_Os01g39420.1|2|1) FN2589-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN2589-S SNP C -> G AC=1;AN=198;BQB=0.814132;DP=4297;DP4=2159,1902,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.70296e-09;MQSB=0.745718;RPB=0.972997;SGB=26.7492;VDB=0.651573;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D135H|559|LOC_Os01g39420|protein_coding|CODING|LOC_Os01g39420.1|2|1) FN3430-S.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN3430-S SNP C -> G AC=2;AN=184;BQB=0.950845;DP=2531;DP4=1257,1206,10,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.35228e-12;MQSB=0.877528;RPB=0.978189;SGB=80.3949;VDB=0.864558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D135H|559|LOC_Os01g39420|protein_coding|CODING|LOC_Os01g39420.1|2|1) FN_829-2-5.SNP.1:22213372 chr01:022213372 0 W/22213372-22213372 FN_829-2-5 Single Base Substitution C-G HET LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN-207.SNP.1:22237288 chr01:022237288 0 W/22237288-22237288 FN-207 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1300-S.SNP.1:22242179 chr01:022242179 0 W/22242179-22242179 FN1300-S Single Base Substitution C-A INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3499-S.SNP.1:22243003 chr01:022243003 0 W/22243003-22243003 FN3499-S SNP C -> T AC=1;AN=188;BQB=0.712096;DP=2561;DP4=1337,1142,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000144417;MQSB=0.985573;RPB=0.993749;SGB=39.8925;VDB=0.258129;EFF=INTERGENIC(MODIFIER||||||||||1) FN-29.SNP.1:22243358 chr01:022243358 0 W/22243358-22243358 FN-29 Single Base Substitution A-T INTERGENIC Homo SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN2582-S.SNP.1:22246048 chr01:022246048 0 W/22246048-22246048 FN2582-S SNP A -> G AC=1;AN=198;BQB=0.999872;DP=4011;DP4=1867,1998,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05289e-06;MQSB=0.957827;RPB=0.906733;SGB=40.3588;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.1:22256596 chr01:022256596 0 W/22256596-22256596 FN978-S Single Base Substitution T-A INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-257.SNP.1:22257673 chr01:022257673 0 W/22257673-22257673 FN-257 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2160-S.SNP.1:22262943 chr01:022262943 0 W/22262943-22262943 FN2160-S SNP G -> A AC=2;AN=168;BQB=0.317335;DP=2192;DP4=1133,1014,10,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.48622e-10;MQSB=0.987965;RPB=0.0882367;SGB=69.8961;VDB=0.24096;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.1:22268165 chr01:022268165 0 W/22268165-22268165 FN-243 Single Base Substitution G-A INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN1443-S.SNP.1:22271234 chr01:022271234 0 W/22271234-22271234 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3761-S.SNP.1:22272638 chr01:022272638 0 W/22272638-22272638 FN3761-S SNP A -> C AC=2;AN=190;BQB=0.985235;DP=2824;DP4=1266,1414,13,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.65947e-12;MQSB=0.870463;RPB=0.47438;SGB=90.0802;VDB=0.910828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I39L|317|LOC_Os01g39520|protein_coding|CODING|LOC_Os01g39520.1|2|1) FN2589-S.SNP.1:22273557 chr01:022273557 0 W/22273557-22273557 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.972756;DP=4057;DP4=2072,1797,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.3994e-07;MQSB=0.770736;RPB=0.35637;SGB=44.9538;VDB=0.442189;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.1:22287163 chr01:022287163 0 W/22287163-22287163 FN-306 Single Base Substitution T-C INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2421.SNP.1:22292391 chr01:022292391 0 W/22292391-22292391 FN2421 SNP G -> C AC=1;AN=200;BQB=0.659303;DP=4300;DP4=2295,1801,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.92189e-06;MQSB=0.976076;RPB=0.421831;SGB=19.0642;VDB=0.932042;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.1:22305861 chr01:022305861 0 W/22305861-22305861 FN-299 Single Base Substitution C-A INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2160-S.SNP.1:22306112 chr01:022306112 0 W/22306112-22306112 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.0205732;DP=3929;DP4=1796,2081,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07268e-07;MQSB=0.987272;RPB=0.999734;SGB=-205.613;VDB=0.854671;EFF=INTRON(MODIFIER||||308|LOC_Os01g39560|protein_coding|CODING|LOC_Os01g39560.1|2|1) FN690-S.SNP.1:22306144 chr01:022306144 0 W/22306144-22306144 FN690-S Single Base Substitution G-A INTRON HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN2670-S.SNP.1:22310387 chr01:022310387 0 W/22310387-22310387 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.815582;DP=4206;DP4=2133,1818,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97598e-17;MQSB=0.97374;RPB=0.954242;SGB=97.9523;VDB=0.340835;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.1:22312980 chr01:022312980 0 W/22312980-22312980 FN3835-S SNP G -> A AC=2;AN=190;BQB=0.719419;DP=2821;DP4=1418,1254,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.08884e-13;MQSB=0.999959;RPB=0.492152;SGB=82.301;VDB=0.0531429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.1:22316922 chr01:022316922 0 W/22316922-22316922 FN3557-S SNP G -> A AC=2;AN=188;BQB=0.947166;DP=3145;DP4=1413,1631,22,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05836e-26;MQSB=0.406134;RPB=0.877202;SGB=104.918;VDB=0.308931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1053C|1273|LOC_Os01g39570|protein_coding|CODING|LOC_Os01g39570.1|7|1) FN-251.SNP.1:22320049 chr01:022320049 0 W/22320049-22320049 FN-251 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN1072-S.SNP.1:22321991 chr01:022321991 0 W/22321991-22321991 FN1072-S Single Base Substitution A-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2617-S.SNP.1:22323732 chr01:022323732 0 W/22323732-22323732 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.735264;DP=3961;DP4=2088,1568,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000252461;MQB=2.24538e-12;MQSB=0.0082822;RPB=0.999876;SGB=22.1104;VDB=0.856569;EFF=INTRON(MODIFIER||||370|LOC_Os01g39580|protein_coding|CODING|LOC_Os01g39580.1|1|1) FN3725-S.SNP.1:22324877 chr01:022324877 0 W/22324877-22324877 FN3725-S SNP A -> C AC=1;AN=190;BQB=0.417559;DP=2786;DP4=1346,1329,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55561e-07;MQSB=0.974938;RPB=0.560874;SGB=50.3161;VDB=0.00495248;EFF=INTRON(MODIFIER||||370|LOC_Os01g39580|protein_coding|CODING|LOC_Os01g39580.1|1|1) FN3422-S.SNP.1:22329456 chr01:022329456 0 W/22329456-22329456 FN3422-S SNP A -> T AC=1;AN=184;BQB=0.87343;DP=2630;DP4=1208,1285,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.36793e-10;MQSB=0.930389;RPB=0.98474;SGB=8.32411;VDB=0.955445;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.1:22330641 chr01:022330641 0 W/22330641-22330641 FN1297-S Single Base Substitution T-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1006-S.SNP.1:22335390 chr01:022335390 0 W/22335390-22335390 FN1006-S Single Base Substitution A-T INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2307.SNP.1:22335390 chr01:022335390 0 W/22335390-22335390 FN2307 SNP A -> T AC=1;AN=192;BQB=0.693268;DP=5203;DP4=2565,2364,19,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.94983e-18;MQSB=0.746952;RPB=0.771887;SGB=118.196;VDB=0.837568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.1:22335814 chr01:022335814 0 W/22335814-22335814 FN3316-S SNP C -> A AC=1;AN=184;BQB=0.965561;DP=3212;DP4=1630,1457,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.83692e-07;MQSB=0.996696;RPB=0.448715;SGB=-2.32838;VDB=0.921911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.1:22336815 chr01:022336815 0 W/22336815-22336815 FN3694-S SNP C -> A AC=1;AN=190;BQB=0.999664;DP=1986;DP4=991,919,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11435e-06;MQSB=0.549462;RPB=0.910302;SGB=21.8853;VDB=0.280203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.1:22339380 chr01:022339380 0 W/22339380-22339380 FN3494-S SNP T -> A AC=2;AN=184;BQB=0.970566;DP=3262;DP4=1687,1413,16,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.3997e-16;MQSB=0.999102;RPB=0.750923;SGB=139.178;VDB=0.737439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N475Y|554|LOC_Os01g39600|protein_coding|CODING|LOC_Os01g39600.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N475Y|689|LOC_Os01g39600|protein_coding|CODING|LOC_Os01g39600.1|3|1) FN3422-S.SNP.1:22342160 chr01:022342160 0 W/22342160-22342160 FN3422-S SNP G -> A AC=1;AN=184;BQB=0.386621;DP=2445;DP4=1118,1208,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.22643e-06;MQSB=0.953642;RPB=0.943989;SGB=3.75875;VDB=0.48952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.1:22343987 chr01:022343987 0 W/22343987-22343987 FN2486 SNP G -> A AC=1;AN=200;BQB=0.983685;DP=4599;DP4=2106,2197,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.72926e-11;MQSB=0.971417;RPB=0.878489;SGB=77.2904;VDB=0.259706;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.1:22367559 chr01:022367559 0 W/22367559-22367559 FN451-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN559-S.SNP.1:22375148 chr01:022375148 0 W/22375148-22375148 FN559-S Single Base Substitution G-A INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2673-S.SNP.1:22375233 chr01:022375233 0 W/22375233-22375233 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.957351;DP=3781;DP4=1974,1577,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74684e-09;MQSB=0.984043;RPB=0.708384;SGB=47.4799;VDB=0.911478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-22.SNP.1:22381175 chr01:022381175 0 W/22381175-22381175 FN-22 Single Base Substitution A-G INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1274-S.SNP.1:22396004 chr01:022396004 0 W/22396004-22396004 FN1274-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g39710 expressed protein SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN2676-S.SNP.1:22397016 chr01:022397016 0 W/22397016-22397016 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.989725;DP=5039;DP4=2611,2214,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13348e-09;MQSB=0.972461;RPB=0.820414;SGB=54.6902;VDB=0.745488;EFF=INTRON(MODIFIER||||264|LOC_Os01g39710|protein_coding|CODING|LOC_Os01g39710.1|1|1) FN759-S.SNP.1:22401489 chr01:022401489 0 W/22401489-22401489 FN759-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1517-S.SNP.1:22410212 chr01:022410212 0 W/22410212-22410212 FN1517-S Single Base Substitution A-G INTRON Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3658-S.SNP.1:22412975 chr01:022412975 0 W/22412975-22412975 FN3658-S SNP T -> A AC=2;AN=190;BQB=0.0475743;DP=2873;DP4=1479,1312,5,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.55347e-09;MQSB=0.982229;RPB=0.674006;SGB=39.6545;VDB=0.366444;EFF=INTRON(MODIFIER||||85|LOC_Os01g39750|protein_coding|CODING|LOC_Os01g39750.1|2|1) FN3658-S.SNP.1:22412976 chr01:022412976 0 W/22412976-22412976 FN3658-S SNP G -> T AC=2;AN=190;BQB=0.99351;DP=2853;DP4=1475,1298,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.50854e-09;MQSB=0.960778;RPB=0.801848;SGB=26.2136;VDB=0.13798;EFF=INTRON(MODIFIER||||85|LOC_Os01g39750|protein_coding|CODING|LOC_Os01g39750.1|2|1) FN3422-S.SNP.1:22414089 chr01:022414089 0 W/22414089-22414089 FN3422-S SNP T -> A AC=1;AN=184;BQB=0.846156;DP=2684;DP4=1217,1331,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.47672e-09;MQSB=0.993984;RPB=0.999801;SGB=53.3568;VDB=0.297533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.1:22415709 chr01:022415709 0 W/22415709-22415709 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.735061;DP=4261;DP4=1633,2339,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.58729e-07;MQSB=0.902402;RPB=0.619982;SGB=40.149;VDB=0.240377;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.1:22419533 chr01:022419533 0 W/22419533-22419533 FN873-S Single Base Substitution T-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN468-S.SNP.1:22426055 chr01:022426055 0 W/22426055-22426055 FN468-S Single Base Substitution T-G INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-243.SNP.1:22432223 chr01:022432223 0 W/22432223-22432223 FN-243 Single Base Substitution G-A INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN2357.SNP.1:22444877 chr01:022444877 0 W/22444877-22444877 FN2357 SNP G -> A AC=1;AN=192;BQB=0.270677;DP=5210;DP4=2718,1963,28,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.17946e-16;MQSB=0.748866;RPB=0.776039;SGB=-45.3478;VDB=0.255428;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.1:22448541 chr01:022448541 0 W/22448541-22448541 FN568-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4183-S.SNP.1:22455879 chr01:022455879 0 W/22455879-22455879 FN4183-S SNP T -> G AC=1;AN=170;BQB=0.992112;DP=2625;DP4=1231,1322,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.00962e-13;MQSB=0.964944;RPB=0.332377;SGB=58.9766;VDB=0.543357;EFF=UTR_3_PRIME(MODIFIER||1953||529|LOC_Os01g39810|protein_coding|CODING|LOC_Os01g39810.3|8|1),UTR_3_PRIME(MODIFIER||1077||553|LOC_Os01g39810|protein_coding|CODING|LOC_Os01g39810.1|10|1),INTRON(MODIFIER||||240|LOC_Os01g39820|protein_coding|CODING|LOC_Os01g39820.1|1|1) FN2668-S.SNP.1:22457931 chr01:022457931 0 W/22457931-22457931 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.986134;DP=4949;DP4=2009,2703,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34561e-17;MQSB=0.757797;RPB=0.835375;SGB=94.3471;VDB=0.876022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.1:22458832 chr01:022458832 0 W/22458832-22458832 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN769-S.SNP.1:22473862 chr01:022473862 0 W/22473862-22473862 FN769-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3946-S.SNP.1:22474551 chr01:022474551 0 W/22474551-22474551 FN3946-S SNP A -> G AC=1;AN=168;BQB=0.821857;DP=2851;DP4=1585,1040,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50402e-08;MQSB=0.997576;RPB=0.915237;SGB=34.748;VDB=0.959649;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.1:22475214 chr01:022475214 0 W/22475214-22475214 FN1455-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g39850 histone-like transcription factor and archaeal histone, putative, expressed SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1615-S.SNP.1:22485209 chr01:022485209 0 W/22485209-22485209 FN1615-S Single Base Substitution G-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2713-S.SNP.1:22485901 chr01:022485901 0 W/22485901-22485901 FN2713-S SNP T -> A AC=1;AN=200;BQB=0.34963;DP=5230;DP4=2328,2611,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51682e-19;MQSB=0.801661;RPB=0.861949;SGB=115.978;VDB=0.995357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.1:22489257 chr01:022489257 0 W/22489257-22489257 FN2478 SNP T -> C AC=1;AN=200;BQB=0.320218;DP=4298;DP4=2136,1933,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.36392e-07;MQSB=0.77869;RPB=0.890214;SGB=33.0593;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.1:22490037 chr01:022490037 0 W/22490037-22490037 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.999279;DP=2469;DP4=1298,1095,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.3953e-08;MQSB=0.75519;RPB=0.918665;SGB=56.7575;VDB=0.730398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A44V|312|LOC_Os01g39860|protein_coding|CODING|LOC_Os01g39860.1|2|1) FN2676-S.SNP.1:22492265 chr01:022492265 0 W/22492265-22492265 FN2676-S SNP A -> C AC=1;AN=200;BQB=0.873292;DP=5201;DP4=2194,2717,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00308e-10;MQSB=0.967394;RPB=0.548067;SGB=54.6902;VDB=0.423372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V18G|133|LOC_Os01g39870|protein_coding|CODING|LOC_Os01g39870.1|1|1) FN_789-3-1.SNP.1:22492268 chr01:022492268 0 W/22492268-22492268 FN_789-3-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os01g39870 expressed protein SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1440-S.SNP.1:22492453 chr01:022492453 0 W/22492453-22492453 FN1440-S Single Base Substitution G-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN819-S.SNP.1:22493495 chr01:022493495 0 W/22493495-22493495 FN819-S Single Base Substitution G-A INTERGENIC HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2667-S.SNP.1:22493925 chr01:022493925 0 W/22493925-22493925 FN2667-S SNP C -> G AC=1;AN=200;BQB=0.292948;DP=5283;DP4=2456,2596,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20643e-06;MQSB=0.980294;RPB=0.816026;SGB=13.8539;VDB=0.997454;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.1:22496312 chr01:022496312 0 W/22496312-22496312 FN1402-S Single Base Substitution C-T INTRON HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3362-S.SNP.1:22496855 chr01:022496855 0 W/22496855-22496855 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.947165;DP=2898;DP4=1412,1389,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.24837e-07;MQSB=0.936546;RPB=0.999621;SGB=44.2207;VDB=0.277459;EFF=INTRON(MODIFIER||||780|LOC_Os01g39890|protein_coding|CODING|LOC_Os01g39890.1|3|1) FN3784-S.SNP.1:22498604 chr01:022498604 0 W/22498604-22498604 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.949869;DP=2190;DP4=989,1087,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.72719e-06;MQSB=0.760312;RPB=0.646921;SGB=21.8853;VDB=0.439579;EFF=INTRON(MODIFIER||||780|LOC_Os01g39890|protein_coding|CODING|LOC_Os01g39890.1|3|1) FN1668-S.SNP.1:22498714 chr01:022498714 0 W/22498714-22498714 FN1668-S SNP C -> T AC=2;AN=188;BQB=0.0971246;DP=3238;DP4=1083,2101,21,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.08651e-18;MQSB=0.705762;RPB=0.595272;SGB=-358.923;VDB=0.098583;EFF=INTRON(MODIFIER||||780|LOC_Os01g39890|protein_coding|CODING|LOC_Os01g39890.1|3|1) FN-233.SNP.1:22499516 chr01:022499516 0 W/22499516-22499516 FN-233 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g39890 transposon protein, putative, unclassified, expressed SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2437.SNP.1:22505273 chr01:022505273 0 W/22505273-22505273 FN2437 SNP G -> A AC=1;AN=200;BQB=0.998214;DP=3943;DP4=1973,1760,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.11244e-11;MQSB=0.70027;RPB=0.967336;SGB=61.9006;VDB=0.928807;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN-221 Single Base Substitution G-A INTERGENIC HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN1304-S.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN1304-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1541-S.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2364.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN2364 SNP G -> A AC=1;AN=192;BQB=0.265758;DP=5026;DP4=2224,2502,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.219459;MQB=0.0739872;MQSB=0;RPB=0.386741;SGB=75.4235;VDB=0.789092;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN3814-S SNP G -> A AC=2;AN=190;BQB=0.940723;DP=2753;DP4=1201,1461,6,8;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.200509;MQB=0.999742;MQSB=0;RPB=0.961731;SGB=58.2031;VDB=0.359944;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN728-S Single Base Substitution G-A INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN940-S.SNP.1:22511530 chr01:022511530 0 W/22511530-22511530 FN940-S Single Base Substitution G-A INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3759-S.SNP.1:22513808 chr01:022513808 0 W/22513808-22513808 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.978125;DP=2874;DP4=1361,1420,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.078984;MQB=0.770132;MQSB=7.67768e-09;RPB=0.731042;SGB=25.439;VDB=0.702734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R175C|1455|LOC_Os01g39930|protein_coding|CODING|LOC_Os01g39930.1|1|1) FN742-S.SNP.1:22516214 chr01:022516214 0 W/22516214-22516214 FN742-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g39930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN540-S.SNP.1:22518718 chr01:022518718 0 W/22518718-22518718 FN540-S Single Base Substitution T-C INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN1455-S.SNP.1:22530093 chr01:022530093 0 W/22530093-22530093 FN1455-S Single Base Substitution T-C INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1040-S.SNP.1:22538523 chr01:022538523 0 W/22538523-22538523 FN1040-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2357.SNP.1:22540510 chr01:022540510 0 W/22540510-22540510 FN2357 SNP T -> C AC=1;AN=192;BQB=0.560861;DP=4713;DP4=2029,2051,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.50029e-14;MQSB=0.946761;RPB=0.637461;SGB=-41.4269;VDB=0.589212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F295S|765|LOC_Os01g39970|protein_coding|CODING|LOC_Os01g39970.1|4|1) FN1626-S.SNP.1:22545904 chr01:022545904 0 W/22545904-22545904 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.365727;DP=1984;DP4=621,1331,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.01981e-08;MQSB=0.366846;RPB=0.499052;SGB=35.9843;VDB=0.921272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.1:22547871 chr01:022547871 0 W/22547871-22547871 FN3843-S SNP T -> C AC=1;AN=190;BQB=0.309843;DP=1404;DP4=311,680,5,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000712251;MQB=2.52523e-07;MQSB=0.63373;RPB=0.744139;SGB=-115.187;VDB=0.220004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.1:22555540 chr01:022555540 0 W/22555540-22555540 FN1499-S Single Base Substitution C-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4149-S.SNP.1:22562284 chr01:022562284 0 W/22562284-22562284 FN4149-S SNP A -> T AC=1;AN=170;BQB=0.993075;DP=2516;DP4=1359,1067,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.07033e-06;MQSB=0.726314;RPB=0.559853;SGB=43.4296;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.1:22575042 chr01:022575042 0 W/22575042-22575042 FN3775-S SNP T -> A AC=2;AN=190;BQB=0.943417;DP=2863;DP4=1447,1306,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.32762e-19;MQSB=0.973881;RPB=0.606254;SGB=100.07;VDB=0.615322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.1:22581211 chr01:022581211 0 W/22581211-22581211 FN3526-S SNP C -> T AC=2;AN=188;BQB=0.98028;DP=1179;DP4=1081,48,14,0;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.61759e-09;MQSB=0.715014;RPB=0.382642;SGB=39.5276;VDB=0.167284;EFF=INTRON(MODIFIER||||342|LOC_Os01g40030|protein_coding|CODING|LOC_Os01g40030.1|1|1) FN3480-S.SNP.1:22589105 chr01:022589105 0 W/22589105-22589105 FN3480-S SNP A -> T AC=1;AN=184;BQB=0.978389;DP=2794;DP4=1367,1289,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2289e-12;MQSB=0.972092;RPB=0.823386;SGB=63.9222;VDB=0.89527;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F291Y|537|LOC_Os01g40040|protein_coding|CODING|LOC_Os01g40040.1|1|1) FN404-S.SNP.1:22597169 chr01:022597169 0 W/22597169-22597169 FN404-S Single Base Substitution G-C INTERGENIC HOMO SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3457-S.SNP.1:22597536 chr01:022597536 0 W/22597536-22597536 FN3457-S SNP T -> C AC=2;AN=184;BQB=0.946057;DP=2306;DP4=1157,1060,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.73793e-15;MQSB=0.910586;RPB=0.398666;SGB=74.4875;VDB=0.660265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.1:22599714 chr01:022599714 0 W/22599714-22599714 FN1721-S SNP A -> G AC=2;AN=188;BQB=0.956199;DP=3717;DP4=2051,1583,31,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.30008e-21;MQSB=0.936556;RPB=0.10846;SGB=0.755789;VDB=0.525358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.1:22600081 chr01:022600081 0 W/22600081-22600081 FN3433-S SNP T -> A AC=1;AN=184;BQB=0.997189;DP=3106;DP4=1501,1538,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.03498e-08;MQSB=0.997869;RPB=0.939821;SGB=32.2261;VDB=0.0763158;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.1:22601855 chr01:022601855 0 W/22601855-22601855 FN534-S Single Base Substitution G-A INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1556-S.SNP.1:22602931 chr01:022602931 0 W/22602931-22602931 FN1556-S Single Base Substitution A-T INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN3323-S.SNP.1:22605739 chr01:022605739 0 W/22605739-22605739 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.860522;DP=3035;DP4=1695,1271,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.0879e-09;MQSB=0.995335;RPB=0.318249;SGB=62.3078;VDB=0.218802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H343Y|551|LOC_Os01g40070|protein_coding|CODING|LOC_Os01g40070.1|1|1) FN2364.SNP.1:22608307 chr01:022608307 0 W/22608307-22608307 FN2364 SNP C -> T AC=1;AN=192;BQB=0.0802981;DP=5390;DP4=2713,2250,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.43866e-15;MQSB=0.369849;RPB=0.593906;SGB=-105.674;VDB=0.55112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.1:22613633 chr01:022613633 0 W/22613633-22613633 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.947311;DP=2314;DP4=1164,1049,8,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.92316e-12;MQSB=0.962282;RPB=0.992197;SGB=38.0354;VDB=0.423484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.1:22613636 chr01:022613636 0 W/22613636-22613636 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.914845;DP=3510;DP4=1830,1610,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.59558e-10;MQSB=0.939222;RPB=0.508656;SGB=67.1521;VDB=0.944591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.1:22620520 chr01:022620520 0 W/22620520-22620520 FN3897-S SNP T -> C AC=1;AN=158;BQB=0.972574;DP=2209;DP4=985,1160,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.38443e-11;MQSB=0.923042;RPB=0.855229;SGB=30.927;VDB=0.235649;EFF=INTRON(MODIFIER||||467|LOC_Os01g40094|protein_coding|CODING|LOC_Os01g40094.1|3|1) FN3897-S.SNP.1:22620546 chr01:022620546 0 W/22620546-22620546 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.500692;DP=2228;DP4=994,1126,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.65505e-12;MQSB=0.942914;RPB=0.862548;SGB=77.6532;VDB=0.986809;EFF=INTRON(MODIFIER||||467|LOC_Os01g40094|protein_coding|CODING|LOC_Os01g40094.1|3|1) FN3662-S.SNP.1:22622805 chr01:022622805 0 W/22622805-22622805 FN3662-S SNP T -> C AC=1;AN=190;BQB=0.7818;DP=2521;DP4=1057,1214,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0018357;MQSB=0.599713;RPB=0.656876;SGB=-0.550503;VDB=0.0279378;EFF=INTRON(MODIFIER||||467|LOC_Os01g40094|protein_coding|CODING|LOC_Os01g40094.1|3|1) W554-1-1.SNP.1:22628674 chr01:022628674 0 W/22628674-22628674 W554-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. W554-1-1.SNP.1:22628675 chr01:022628675 0 W/22628675-22628675 W554-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1048-S.SNP.1:22631028 chr01:022631028 0 W/22631028-22631028 FN1048-S Single Base Substitution T-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN687-S.SNP.1:22634762 chr01:022634762 0 W/22634762-22634762 FN687-S Single Base Substitution T-G INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3312-S.SNP.1:22635534 chr01:022635534 0 W/22635534-22635534 FN3312-S SNP T -> A AC=1;AN=184;BQB=0.0472659;DP=4107;DP4=1736,2027,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.72077e-07;MQSB=0.143745;RPB=0.998296;SGB=-12.1051;VDB=0.841141;EFF=INTRON(MODIFIER||||446|LOC_Os01g40120|protein_coding|CODING|LOC_Os01g40120.1|3|1) FN230-S.SNP.1:22636512 chr01:022636512 0 W/22636512-22636512 FN230-S Single Base Substitution G-A INTRON HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN-410.SNP.1:22642952 chr01:022642952 0 W/22642952-22642952 FN-410 Single Base Substitution T-C INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2232-S.SNP.1:22645280 chr01:022645280 0 W/22645280-22645280 FN2232-S SNP G -> A AC=2;AN=190;BQB=0.834022;DP=3652;DP4=1775,1649,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000273823;MQB=5.91361e-14;MQSB=0.671468;RPB=0.298408;SGB=117.403;VDB=0.276897;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T86|996|LOC_Os01g40150|protein_coding|CODING|LOC_Os01g40150.1|1|1) FN2706-S.SNP.1:22645792 chr01:022645792 0 W/22645792-22645792 FN2706-S SNP A -> G AC=1;AN=200;BQB=0.0139004;DP=4848;DP4=2432,2193,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.96643e-07;MQSB=0.812412;RPB=0.759306;SGB=-0.141083;VDB=0.056073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q257R|996|LOC_Os01g40150|protein_coding|CODING|LOC_Os01g40150.1|1|1) FN3523-S.SNP.1:22663015 chr01:022663015 0 W/22663015-22663015 FN3523-S SNP G -> C AC=1;AN=188;BQB=0.738688;DP=2687;DP4=1557,1074,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.01455e-06;MQSB=0.960306;RPB=0.831224;SGB=18.4463;VDB=0.128765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D929H|997|LOC_Os01g40170|protein_coding|CODING|LOC_Os01g40170.1|12|1) FN1668-S.SNP.1:22663640 chr01:022663640 0 W/22663640-22663640 FN1668-S SNP C -> T AC=1;AN=188;BQB=0.849273;DP=3094;DP4=1735,1287,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.64799e-11;MQSB=0.951683;RPB=0.748384;SGB=16.3413;VDB=0.340272;EFF=INTRON(MODIFIER||||997|LOC_Os01g40170|protein_coding|CODING|LOC_Os01g40170.1|13|1) FN-156.SNP.1:22665269 chr01:022665269 0 W/22665269-22665269 FN-156 Single Base Substitution C-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3387-S.SNP.1:22665269 chr01:022665269 0 W/22665269-22665269 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.667968;DP=2484;DP4=1096,1298,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.47879e-06;MQSB=0.945068;RPB=0.529879;SGB=35.7479;VDB=0.706775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.1:22666614 chr01:022666614 0 W/22666614-22666614 FN2476 SNP G -> T AC=2;AN=200;BQB=0.276942;DP=4525;DP4=2274,1952,29,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000883978;MQB=2.83829e-23;MQSB=0.999834;RPB=0.789665;SGB=173.661;VDB=0.000586327;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R134|298|LOC_Os01g40180|protein_coding|CODING|LOC_Os01g40180.1|1|1) FN767-S.SNP.1:22669647 chr01:022669647 0 W/22669647-22669647 FN767-S Single Base Substitution C-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2372.SNP.1:22671328 chr01:022671328 0 W/22671328-22671328 FN2372 SNP C -> T AC=2;AN=192;BQB=0.325124;DP=2997;DP4=1060,1727,14,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.77693e-19;MQSB=0.208656;RPB=0.179716;SGB=128.889;VDB=0.11675;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.1:22675380 chr01:022675380 0 W/22675380-22675380 W385-6-8-4 Single Base Substitution T-A INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1533-S.SNP.1:22681841 chr01:022681841 0 W/22681841-22681841 FN1533-S Single Base Substitution T-A INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1533-S.SNP.1:22681842 chr01:022681842 0 W/22681842-22681842 FN1533-S Single Base Substitution A-C INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN739-S.SNP.1:22682908 chr01:022682908 0 W/22682908-22682908 FN739-S Single Base Substitution C-G INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN590-S.SNP.1:22692909 chr01:022692909 0 W/22692909-22692909 FN590-S Single Base Substitution G-A INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN2084-S.SNP.1:22693149 chr01:022693149 0 W/22693149-22693149 FN2084-S SNP G -> A AC=1;AN=168;BQB=0.448596;DP=2534;DP4=1213,1253,4,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.73472e-08;MQSB=0.993774;RPB=0.898418;SGB=-15.8033;VDB=0.915796;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A28|71|LOC_Os01g40210|protein_coding|CODING|LOC_Os01g40210.1|1|1) FN3829-S.SNP.1:22694162 chr01:022694162 0 W/22694162-22694162 FN3829-S SNP A -> G AC=2;AN=190;BQB=0.775165;DP=2378;DP4=854,1256,6,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.36859e-09;MQSB=0.968464;RPB=0.426511;SGB=71.8647;VDB=0.515604;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.1:22706453 chr01:022706453 0 W/22706453-22706453 FN452-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN-142.SNP.1:22708561 chr01:022708561 0 W/22708561-22708561 FN-142 Single Base Substitution G-A INTERGENIC HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN2795-S.SNP.1:22709212 chr01:022709212 0 W/22709212-22709212 FN2795-S SNP T -> A AC=2;AN=198;BQB=0.631023;DP=4086;DP4=1761,2106,13,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.2297e-16;MQSB=0.769091;RPB=0.864621;SGB=57.8907;VDB=0.742067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.1:22712851 chr01:022712851 0 W/22712851-22712851 FN3893-S SNP A -> G AC=2;AN=158;BQB=0.975387;DP=2248;DP4=1136,1028,13,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.51458e-14;MQSB=0.975452;RPB=0.694324;SGB=103.87;VDB=0.327558;EFF=INTRON(MODIFIER||||2405|LOC_Os01g40250|protein_coding|CODING|LOC_Os01g40250.1|3|1) FN1481-S.SNP.1:22722794 chr01:022722794 0 W/22722794-22722794 FN1481-S Single Base Substitution C-A INTRON HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2648-S.SNP.1:22729856 chr01:022729856 0 W/22729856-22729856 FN2648-S SNP C -> T AC=2;AN=200;BQB=0.848904;DP=5072;DP4=2247,2463,34,37;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.88921e-39;MQSB=0.77899;RPB=0.752333;SGB=315.767;VDB=0.479761;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.1:22739063 chr01:022739063 0 W/22739063-22739063 FN970-S Single Base Substitution C-A INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1534-S.SNP.1:22739468 chr01:022739468 0 W/22739468-22739468 FN1534-S Single Base Substitution C-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN3571-S.SNP.1:22744270 chr01:022744270 0 W/22744270-22744270 FN3571-S SNP G -> T AC=1;AN=188;BQB=0.708573;DP=2649;DP4=1326,1269,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000153998;MQSB=0.992719;RPB=0.620559;SGB=25.3545;VDB=0.553359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R150L|371|LOC_Os01g40280|protein_coding|CODING|LOC_Os01g40280.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R150L|301|LOC_Os01g40280|protein_coding|CODING|LOC_Os01g40280.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R144L|295|LOC_Os01g40280|protein_coding|CODING|LOC_Os01g40280.3|6|1) FN1547-S.SNP.1:22747252 chr01:022747252 0 W/22747252-22747252 FN1547-S Single Base Substitution C-T INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2452.SNP.1:22749517 chr01:022749517 0 W/22749517-22749517 FN2452 SNP G -> A AC=1;AN=200;BQB=0.984491;DP=4491;DP4=2096,2162,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81398e-08;MQSB=0.994362;RPB=0.757739;SGB=33.0593;VDB=0.769043;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.1:22752246 chr01:022752246 0 W/22752246-22752246 FN-305 Single Base Substitution C-T INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3615-S.SNP.1:22754109 chr01:022754109 0 W/22754109-22754109 FN3615-S SNP T -> A AC=2;AN=190;BQB=0.950147;DP=3272;DP4=1589,1578,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.81006e-12;MQSB=0.935227;RPB=0.968508;SGB=75.1932;VDB=0.389372;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.1:22755437 chr01:022755437 0 W/22755437-22755437 FN-106 Single Base Substitution A-C UTR_5_PRIME HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN4234-S.SNP.1:22762439 chr01:022762439 0 W/22762439-22762439 FN4234-S SNP G -> C AC=1;AN=170;BQB=0.972553;DP=2788;DP4=1327,1377,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.54995e-06;MQSB=0.994848;RPB=0.251501;SGB=34.5445;VDB=0.847584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.1:22762748 chr01:022762748 0 W/22762748-22762748 FN-375 Single Base Substitution A-G INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN696-S.SNP.1:22773725 chr01:022773725 0 W/22773725-22773725 FN696-S Single Base Substitution C-T INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2191-S.SNP.1:22774857 chr01:022774857 0 W/22774857-22774857 FN2191-S SNP T -> C AC=2;AN=190;BQB=0.115294;DP=3959;DP4=1584,2068,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.0474e-12;MQSB=0.00321929;RPB=0.528636;SGB=75.1932;VDB=0.43012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.1:22778158 chr01:022778158 0 W/22778158-22778158 FN2212-S SNP G -> T AC=2;AN=190;BQB=0.801847;DP=5126;DP4=2149,2615,43,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.24506e-42;MQSB=0.93238;RPB=0.428911;SGB=308.67;VDB=0.0657954;EFF=INTRON(MODIFIER||||670|LOC_Os01g40340|protein_coding|CODING|LOC_Os01g40340.1|6|1),INTRON(MODIFIER||||669|LOC_Os01g40340|protein_coding|CODING|LOC_Os01g40340.2|6|1),INTRON(MODIFIER||||473|LOC_Os01g40340|protein_coding|CODING|LOC_Os01g40340.3|6|1) FN1319-S.SNP.1:22788183 chr01:022788183 0 W/22788183-22788183 FN1319-S Single Base Substitution C-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1269-S.SNP.1:22792469 chr01:022792469 0 W/22792469-22792469 FN1269-S Single Base Substitution A-T INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN-127.SNP.1:22793612 chr01:022793612 0 W/22793612-22793612 FN-127 Single Base Substitution T-A INTRON HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1249-S.SNP.1:22796569 chr01:022796569 0 W/22796569-22796569 FN1249-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN1182-S.SNP.1:22798621 chr01:022798621 0 W/22798621-22798621 FN1182-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN908-S.SNP.1:22801554 chr01:022801554 0 W/22801554-22801554 FN908-S Single Base Substitution A-G INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN-216.SNP.1:22806126 chr01:022806126 0 W/22806126-22806126 FN-216 Single Base Substitution G-T INTRON HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN4087-S.SNP.1:22806235 chr01:022806235 0 W/22806235-22806235 FN4087-S SNP A -> T AC=2;AN=182;BQB=0.863534;DP=2752;DP4=1357,1324,9,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.98944e-09;MQSB=0.945429;RPB=0.765664;SGB=53.182;VDB=0.448738;EFF=INTRON(MODIFIER||||421|LOC_Os01g40390|protein_coding|CODING|LOC_Os01g40390.1|3|1) FN1297-S.SNP.1:22808716 chr01:022808716 0 W/22808716-22808716 FN1297-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g40400 histone deacetylase 19, putative, expressed SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3628-S.SNP.1:22811193 chr01:022811193 0 W/22811193-22811193 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.74287;DP=2349;DP4=1450,825,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6575e-06;MQSB=2.42703e-09;RPB=0.891953;SGB=71.8647;VDB=0.900613;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.1:22829284 chr01:022829284 0 W/22829284-22829284 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.232087;DP=2782;DP4=1553,1031,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.02586e-07;MQSB=0.428281;RPB=0.999953;SGB=26.2136;VDB=0.26446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-77.SNP.1:22831326 chr01:022831326 0 W/22831326-22831326 FN-77 Single Base Substitution G-T INTERGENIC HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN322-S.SNP.1:22832142 chr01:022832142 0 W/22832142-22832142 FN322-S Single Base Substitution G-A INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN971-S.SNP.1:22836354 chr01:022836354 0 W/22836354-22836354 FN971-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g40450 2-aminoethanethiol dioxygenase, putative, expressed SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN971-S.SNP.1:22836405 chr01:022836405 0 W/22836405-22836405 FN971-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN971-S.SNP.1:22836406 chr01:022836406 0 W/22836406-22836406 FN971-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g40450 2-aminoethanethiol dioxygenase, putative, expressed SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-393.SNP.1:22840503 chr01:022840503 0 W/22840503-22840503 FN-393 Single Base Substitution G-T INTERGENIC HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN928-S.SNP.1:22845381 chr01:022845381 0 W/22845381-22845381 FN928-S Single Base Substitution A-C INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3998-S.SNP.1:22851458 chr01:022851458 0 W/22851458-22851458 FN3998-S SNP C -> G AC=1;AN=168;BQB=0.73361;DP=2439;DP4=1304,1036,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00164002;MQB=0.138447;MQSB=0.229557;RPB=0.403791;SGB=34.4498;VDB=0.303697;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.1:22857471 chr01:022857471 0 W/22857471-22857471 FN3359-S SNP C -> A AC=2;AN=184;BQB=0.87728;DP=2841;DP4=1200,1540,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.78612e-15;MQSB=0.905914;RPB=0.99657;SGB=81.5311;VDB=0.817098;EFF=INTRON(MODIFIER||||351|LOC_Os01g40470|protein_coding|CODING|LOC_Os01g40470.1|8|1) FN-299.SNP.1:22860132 chr01:022860132 0 W/22860132-22860132 FN-299 Single Base Substitution G-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-268.SNP.1:22862767 chr01:022862767 0 W/22862767-22862767 FN-268 Single Base Substitution G-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN739-S.SNP.1:22865359 chr01:022865359 0 W/22865359-22865359 FN739-S Single Base Substitution A-G INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN949-S.SNP.1:22875625 chr01:022875625 0 W/22875625-22875625 FN949-S Single Base Substitution G-T INTERGENIC HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN887-S.SNP.1:22883669 chr01:022883669 0 W/22883669-22883669 FN887-S Single Base Substitution A-G INTRON HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN654-S.SNP.1:22885874 chr01:022885874 0 W/22885874-22885874 FN654-S Single Base Substitution A-T INTRON HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2304.SNP.1:22886957 chr01:022886957 0 W/22886957-22886957 FN2304 SNP T -> C AC=2;AN=192;BQB=0.880358;DP=5219;DP4=2327,2434,38,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.64773e-38;MQSB=0.855247;RPB=0.96724;SGB=36.8431;VDB=0.685597;EFF=INTRON(MODIFIER||||767|LOC_Os01g40499|protein_coding|CODING|LOC_Os01g40499.1|2|1) FN3514-S.SNP.1:22892462 chr01:022892462 0 W/22892462-22892462 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.956233;DP=3147;DP4=1432,1521,20,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.45422e-20;MQSB=0.973497;RPB=0.665051;SGB=167.105;VDB=0.51012;EFF=INTRON(MODIFIER||||767|LOC_Os01g40499|protein_coding|CODING|LOC_Os01g40499.1|2|1) FN1080-S.SNP.1:22904478 chr01:022904478 0 W/22904478-22904478 FN1080-S Single Base Substitution T-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2774-S.SNP.1:22914574 chr01:022914574 0 W/22914574-22914574 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.706876;DP=4475;DP4=2198,2056,17,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02841e-15;MQSB=0.992964;RPB=0.90335;SGB=118.476;VDB=0.776087;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.1:22915350 chr01:022915350 0 W/22915350-22915350 FN476-S Single Base Substitution C-T INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2673-S.SNP.1:22924920 chr01:022924920 0 W/22924920-22924920 FN2673-S SNP G -> A AC=2;AN=200;BQB=0.836001;DP=4979;DP4=2337,2382,36,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.0487e-41;MQSB=0.999655;RPB=0.809807;SGB=164.954;VDB=0.535275;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.1:22940052 chr01:022940052 0 W/22940052-22940052 FN442-S Single Base Substitution A-T INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN4068-S.SNP.1:22944073 chr01:022944073 0 W/22944073-22944073 FN4068-S SNP A -> G AC=1;AN=182;BQB=0.774919;DP=2894;DP4=1507,1213,11,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.90801e-10;MQSB=0.968161;RPB=0.971259;SGB=63.7146;VDB=0.293624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.1:22945262 chr01:022945262 0 W/22945262-22945262 FN1400-S Single Base Substitution C-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2678-S.SNP.1:22946257 chr01:022946257 0 W/22946257-22946257 FN2678-S SNP C -> A AC=1;AN=200;BQB=0.941419;DP=5121;DP4=2666,2235,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77039e-08;MQSB=0.947306;RPB=0.984327;SGB=36.6644;VDB=0.474283;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.1:22946962 chr01:022946962 0 W/22946962-22946962 FN_935-1 Single Base Substitution C-T Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. W313-1-1-1-1.SNP.1:22948087 chr01:022948087 0 W/22948087-22948087 W313-1-1-1-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN1198-S.SNP.1:22959332 chr01:022959332 0 W/22959332-22959332 FN1198-S Single Base Substitution A-T INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN_935-1.SNP.1:22960467 chr01:022960467 0 W/22960467-22960467 FN_935-1 Single Base Substitution A-C Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN_935-1.SNP.1:22960479 chr01:022960479 0 W/22960479-22960479 FN_935-1 Single Base Substitution G-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN895-S.SNP.1:22960553 chr01:022960553 0 W/22960553-22960553 FN895-S Single Base Substitution G-A INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1158-S.SNP.1:22966002 chr01:022966002 0 W/22966002-22966002 FN1158-S Single Base Substitution G-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN566-S.SNP.1:22967311 chr01:022967311 0 W/22967311-22967311 FN566-S Single Base Substitution T-C INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. W42-1-3S-1.SNP.1:22969444 chr01:022969444 0 W/22969444-22969444 W42-1-3S-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1623-S.SNP.1:22972324 chr01:022972324 0 W/22972324-22972324 FN1623-S Single Base Substitution T-A INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN515-S.SNP.1:22972549 chr01:022972549 0 W/22972549-22972549 FN515-S Single Base Substitution A-T INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN2596-S.SNP.1:22973654 chr01:022973654 0 W/22973654-22973654 FN2596-S SNP T -> C AC=1;AN=198;BQB=0.763774;DP=4120;DP4=2026,1804,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.3811e-06;MQSB=0.999678;RPB=0.934018;SGB=21.559;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.1:22974866 chr01:022974866 0 W/22974866-22974866 FN3799-S SNP T -> C AC=2;AN=190;BQB=0.848044;DP=2354;DP4=1198,969,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.85342e-12;MQSB=0.910498;RPB=0.748057;SGB=99.1879;VDB=0.794671;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.1:22974866 chr01:022974866 0 W/22974866-22974866 FN3861-S SNP T -> C AC=2;AN=158;BQB=0.0595831;DP=2275;DP4=1183,909,13,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.37059e-05;MQSB=0.999878;RPB=0.675115;SGB=-39.7928;VDB=0.771909;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.1:22977865 chr01:022977865 0 W/22977865-22977865 FN543-S Single Base Substitution A-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3810-S.SNP.1:22979066 chr01:022979066 0 W/22979066-22979066 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.050863;DP=2618;DP4=1272,1270,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42594e-05;MQSB=0.978705;RPB=0.932484;SGB=4.11112;VDB=0.424233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.1:22982834 chr01:022982834 0 W/22982834-22982834 FN2594-S SNP C -> A AC=1;AN=198;BQB=0.665246;DP=4043;DP4=1959,1851,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.31803e-09;MQSB=0.995169;RPB=0.990569;SGB=47.3393;VDB=0.328546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R101L|438|LOC_Os01g40640|protein_coding|CODING|LOC_Os01g40640.1|1|1),UTR_5_PRIME(MODIFIER||454||234|LOC_Os01g40640|protein_coding|CODING|LOC_Os01g40640.3|1|1) FN321-S.SNP.1:22988498 chr01:022988498 0 W/22988498-22988498 FN321-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN321-S.SNP.1:22988499 chr01:022988499 0 W/22988499-22988499 FN321-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3955-S.SNP.1:22995464 chr01:022995464 0 W/22995464-22995464 FN3955-S SNP A -> G AC=2;AN=168;BQB=0.9977;DP=2641;DP4=1388,1108,20,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.35427e-17;MQSB=0.41754;RPB=0.974532;SGB=127.497;VDB=0.47394;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.1:22998809 chr01:022998809 0 W/22998809-22998809 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.982006;DP=2089;DP4=1139,901,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.3128e-06;MQSB=0.979754;RPB=0.77967;SGB=21.1076;VDB=0.176359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.1:23003215 chr01:023003215 0 W/23003215-23003215 FN2412 SNP G -> C AC=1;AN=200;BQB=0.181637;DP=5172;DP4=2195,2600,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.29645e-12;MQSB=0.838795;RPB=0.527468;SGB=28.752;VDB=0.0124766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.1:23006674 chr01:023006674 0 W/23006674-23006674 FN2650-S SNP T -> C AC=1;AN=200;BQB=0.992729;DP=5106;DP4=2405,2476,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.4241e-11;MQSB=0.998845;RPB=0.650883;SGB=34.6953;VDB=0.330809;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S756|1062|LOC_Os01g40720|protein_coding|CODING|LOC_Os01g40720.1|1|1) FN1058-S.SNP.1:23013105 chr01:023013105 0 W/23013105-23013105 FN1058-S Single Base Substitution A-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3852-S.SNP.1:23036150 chr01:023036150 0 W/23036150-23036150 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.976298;DP=2446;DP4=1118,1226,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.57061e-05;MQSB=0.935174;RPB=0.993558;SGB=29.5899;VDB=0.255821;EFF=INTRON(MODIFIER||||228|LOC_Os01g40780|protein_coding|CODING|LOC_Os01g40780.1|1|1) FN2199-S.SNP.1:23036712 chr01:023036712 0 W/23036712-23036712 FN2199-S SNP G -> T AC=1;AN=190;BQB=0.969974;DP=4585;DP4=2085,2210,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26256e-11;MQSB=0.948472;RPB=0.930927;SGB=36.4291;VDB=0.103263;EFF=INTRON(MODIFIER||||228|LOC_Os01g40780|protein_coding|CODING|LOC_Os01g40780.1|1|1) FN2199-S.SNP.1:23036713 chr01:023036713 0 W/23036713-23036713 FN2199-S SNP A -> T AC=1;AN=190;BQB=0.885354;DP=4576;DP4=1937,2207,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.86286e-12;MQSB=0.92721;RPB=0.960127;SGB=38.983;VDB=0.30485;EFF=INTRON(MODIFIER||||228|LOC_Os01g40780|protein_coding|CODING|LOC_Os01g40780.1|1|1) FN2166-S.SNP.1:23038029 chr01:023038029 0 W/23038029-23038029 FN2166-S SNP A -> T AC=2;AN=168;BQB=0.178105;DP=4354;DP4=2016,2257,24,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000229674;MQB=7.18693e-25;MQSB=0.812604;RPB=0.4041;SGB=107.263;VDB=0.429209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.1:23040030 chr01:023040030 0 W/23040030-23040030 FN1635-S SNP C -> T AC=1;AN=188;BQB=0.582226;DP=3631;DP4=1847,1726,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5594e-08;MQSB=0.986091;RPB=0.272386;SGB=-38.278;VDB=0.0673355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.1:23040427 chr01:023040427 0 W/23040427-23040427 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.933385;DP=2406;DP4=1068,1236,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.00625e-06;MQSB=0.990784;RPB=0.215582;SGB=20.5959;VDB=0.246704;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.1:23041092 chr01:023041092 0 W/23041092-23041092 FN447-S Single Base Substitution C-T INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2118-S.SNP.1:23044397 chr01:023044397 0 W/23044397-23044397 FN2118-S SNP T -> G AC=1;AN=168;BQB=0.370313;DP=4050;DP4=2255,1728,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00419753;MQB=2.26843e-10;MQSB=0.749486;RPB=0.432077;SGB=34.3388;VDB=0.356181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.1:23044949 chr01:023044949 0 W/23044949-23044949 FN2634-S SNP A -> T AC=1;AN=200;BQB=0.978278;DP=4674;DP4=2225,2176,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10858e-15;MQSB=0.365419;RPB=0.928592;SGB=97.9523;VDB=0.880654;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.1:23045142 chr01:023045142 0 W/23045142-23045142 FN478-S Single Base Substitution C-T INTERGENIC HOMO SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1001-S.SNP.1:23047003 chr01:023047003 0 W/23047003-23047003 FN1001-S Single Base Substitution T-C INTERGENIC HOMO SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2387.SNP.1:23050847 chr01:023050847 0 W/23050847-23050847 FN2387 SNP C -> T AC=1;AN=192;BQB=0.115181;DP=4948;DP4=2084,2435,6,15;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0323363;MQB=0.000743685;MQSB=0.0197523;RPB=0.990568;SGB=39.1713;VDB=0.216827;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.1:23050867 chr01:023050867 0 W/23050867-23050867 FN618-S Single Base Substitution C-T INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3380-S.SNP.1:23056757 chr01:023056757 0 W/23056757-23056757 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.562435;DP=4189;DP4=2060,2032,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.138697;MQB=0.825885;MQSB=0;RPB=0.67791;SGB=60.4004;VDB=0.0629162;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1718|1907|LOC_Os01g40810|protein_coding|CODING|LOC_Os01g40810.1|5|1) FN928-S.SNP.1:23057070 chr01:023057070 0 W/23057070-23057070 FN928-S Single Base Substitution G-T INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN543-S.SNP.1:23057760 chr01:023057760 0 W/23057760-23057760 FN543-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g40810 retrotransposon protein, putative, unclassified, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1379-S.SNP.1:23078274 chr01:023078274 0 W/23078274-23078274 FN1379-S Single Base Substitution G-T INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1509-S.SNP.1:23082046 chr01:023082046 0 W/23082046-23082046 FN1509-S Single Base Substitution G-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2279-S.SNP.1:23097603 chr01:023097603 0 W/23097603-23097603 FN2279-S SNP A -> C AC=2;AN=190;BQB=0.781953;DP=4475;DP4=1805,1750,22,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.6767e-17;MQSB=0.419904;RPB=0.576549;SGB=-237.672;VDB=0.557777;EFF=INTRON(MODIFIER||||502|LOC_Os01g40860|protein_coding|CODING|LOC_Os01g40860.1|1|1) FN2279-S.SNP.1:23097608 chr01:023097608 0 W/23097608-23097608 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.825596;DP=4523;DP4=2055,2123,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.38236e-22;MQSB=0.38361;RPB=0.700404;SGB=117.84;VDB=0.443303;EFF=INTRON(MODIFIER||||502|LOC_Os01g40860|protein_coding|CODING|LOC_Os01g40860.1|1|1) FN-272.SNP.1:23106130 chr01:023106130 0 W/23106130-23106130 FN-272 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN378-S.SNP.1:23110474 chr01:023110474 0 W/23110474-23110474 FN378-S Single Base Substitution C-T INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN_827-1.SNP.1:23111323 chr01:023111323 0 W/23111323-23111323 FN_827-1 Single Base Substitution A-G HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN_827-1.SNP.1:23112246 chr01:023112246 0 W/23112246-23112246 FN_827-1 Single Base Substitution A-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN-109.SNP.1:23118798 chr01:023118798 0 W/23118798-23118798 FN-109 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g40870 aldehyde dehydrogenase, putative, expressed SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN778-S.SNP.1:23118999 chr01:023118999 0 W/23118999-23118999 FN778-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g40870 aldehyde dehydrogenase, putative, expressed SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2285.SNP.1:23138751 chr01:023138751 0 W/23138751-23138751 FN2285 SNP T -> A AC=2;AN=192;BQB=0.955871;DP=4949;DP4=2004,2600,17,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.19511e-21;MQSB=0.787071;RPB=0.131845;SGB=103.28;VDB=0.954102;EFF=INTRON(MODIFIER||||732|LOC_Os01g40910|protein_coding|CODING|LOC_Os01g40910.1|2|1) FN2114-S.SNP.1:23141598 chr01:023141598 0 W/23141598-23141598 FN2114-S SNP C -> T AC=2;AN=168;BQB=0.999983;DP=2405;DP4=1555,791,16,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.0004158;MQB=1.81951e-14;MQSB=0.582426;RPB=0.246596;SGB=79.3486;VDB=0.735068;EFF=INTRON(MODIFIER||||732|LOC_Os01g40910|protein_coding|CODING|LOC_Os01g40910.1|10|1) FN482-S.SNP.1:23143617 chr01:023143617 0 W/23143617-23143617 FN482-S Single Base Substitution G-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN2774-S.SNP.1:23145867 chr01:023145867 0 W/23145867-23145867 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.72281;DP=4487;DP4=2326,1922,22,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.84611e-19;MQSB=0.927765;RPB=0.713773;SGB=-0.743142;VDB=0.102291;EFF=INTRON(MODIFIER||||204|LOC_Os01g40920|protein_coding|CODING|LOC_Os01g40920.1|1|1) FN1176-S.SNP.1:23146821 chr01:023146821 0 W/23146821-23146821 FN1176-S Single Base Substitution G-T INTRON HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1176-S.SNP.1:23147470 chr01:023147470 0 W/23147470-23147470 FN1176-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g40920 hypothetical protein SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3937-S.SNP.1:23149454 chr01:023149454 0 W/23149454-23149454 FN3937-S SNP G -> C AC=1;AN=156;BQB=0.820334;DP=2388;DP4=1199,1101,5,6;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=2.79886e-07;MQSB=0.999649;RPB=0.0761021;SGB=11.9715;VDB=0.237402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1084-S.SNP.1:23156595 chr01:023156595 0 W/23156595-23156595 FN1084-S Single Base Substitution G-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN4174-S.SNP.1:23158292 chr01:023158292 0 W/23158292-23158292 FN4174-S SNP G -> A AC=2;AN=170;BQB=0.938041;DP=2222;DP4=979,1152,5,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.42283e-07;MQSB=0.025518;RPB=0.773173;SGB=48.6486;VDB=0.712522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.1:23159960 chr01:023159960 0 W/23159960-23159960 FN2666-S SNP T -> G AC=1;AN=200;BQB=0.973883;DP=4895;DP4=2783,1924,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.17961e-14;MQSB=0.867695;RPB=0.924918;SGB=-9.47921;VDB=0.198597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.1:23169842 chr01:023169842 0 W/23169842-23169842 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.917342;DP=4966;DP4=2539,2277,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.8688e-15;MQSB=0.840752;RPB=0.795781;SGB=19.1209;VDB=0.0824531;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.1:23170802 chr01:023170802 0 W/23170802-23170802 FN276-S Single Base Substitution C-T INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN563-S.SNP.1:23187379 chr01:023187379 0 W/23187379-23187379 FN563-S Single Base Substitution T-C INTERGENIC HOMO SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2271-S.SNP.1:23187531 chr01:023187531 0 W/23187531-23187531 FN2271-S SNP T -> G AC=1;AN=190;BQB=0.0958111;DP=4188;DP4=1857,1843,11,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68769e-14;MQSB=0.94281;RPB=0.0658961;SGB=-113.221;VDB=0.728161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.1:23187533 chr01:023187533 0 W/23187533-23187533 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.761899;DP=4199;DP4=1933,1923,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.18988e-15;MQSB=0.997338;RPB=0.891033;SGB=51.7524;VDB=0.462638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.1:23193697 chr01:023193697 0 W/23193697-23193697 FN3896-S SNP T -> A AC=1;AN=158;BQB=0.960831;DP=2599;DP4=1046,1446,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.38285e-05;MQSB=0.947033;RPB=0.521908;SGB=38.3284;VDB=0.726254;EFF=INTRON(MODIFIER||||2180|LOC_Os01g40990|protein_coding|CODING|LOC_Os01g40990.2|7|1),INTRON(MODIFIER||||2174|LOC_Os01g40990|protein_coding|CODING|LOC_Os01g40990.3|7|1) FN2653-S.SNP.1:23204739 chr01:023204739 0 W/23204739-23204739 FN2653-S SNP T -> C AC=1;AN=200;BQB=0.995568;DP=4782;DP4=2298,2262,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10187e-15;MQSB=0.889771;RPB=0.933883;SGB=-8.26887;VDB=0.924865;EFF=INTRON(MODIFIER||||2180|LOC_Os01g40990|protein_coding|CODING|LOC_Os01g40990.2|23|1),INTRON(MODIFIER||||2174|LOC_Os01g40990|protein_coding|CODING|LOC_Os01g40990.3|23|1) FN2785-S.SNP.1:23214690 chr01:023214690 0 W/23214690-23214690 FN2785-S SNP A -> G AC=1;AN=198;BQB=0.85637;DP=4022;DP4=1695,1913,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.01369e-13;MQSB=0.938889;RPB=0.555336;SGB=65.3149;VDB=0.314621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F174L|195|LOC_Os01g41000|protein_coding|CODING|LOC_Os01g41000.1|2|1) FN4163-S.SNP.1:23216030 chr01:023216030 0 W/23216030-23216030 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.988245;DP=2517;DP4=1271,1153,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.05262e-05;MQSB=0.994293;RPB=0.817231;SGB=34.5445;VDB=0.296895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.1:23217311 chr01:023217311 0 W/23217311-23217311 FN2659-S SNP G -> A AC=2;AN=200;BQB=0.898232;DP=5077;DP4=2265,2545,23,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.0122e-29;MQSB=0.800818;RPB=0.792353;SGB=120.666;VDB=0.0463686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.1:23221842 chr01:023221842 0 W/23221842-23221842 FN2358 SNP T -> C AC=2;AN=192;BQB=0.461601;DP=5181;DP4=2394,2572,23,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.16251e-24;MQSB=0.857605;RPB=0.147651;SGB=-0.0956204;VDB=0.068099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.1:23235255 chr01:023235255 0 W/23235255-23235255 FN3814-S SNP A -> T AC=1;AN=190;BQB=0.989645;DP=2689;DP4=1493,1097,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000371885;MQB=1.39873e-08;MQSB=0.997063;RPB=0.91094;SGB=53.6492;VDB=0.160695;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I259|271|LOC_Os01g41030|protein_coding|CODING|LOC_Os01g41030.1|3|1) FN3923-S.SNP.1:23259266 chr01:023259266 0 W/23259266-23259266 FN3923-S SNP G -> T AC=1;AN=158;BQB=0.892201;DP=2495;DP4=1295,1123,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.000801603;MQB=0.00167911;MQSB=0.265219;RPB=0.938269;SGB=47.0672;VDB=0.896381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R1462S|1955|LOC_Os01g41070|protein_coding|CODING|LOC_Os01g41070.1|3|1) FN1722-S.SNP.1:23259270 chr01:023259270 0 W/23259270-23259270 FN1722-S SNP C -> T AC=2;AN=188;BQB=0.915488;DP=1625;DP4=769,826,8,4;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.00123077;MQB=0.862813;MQSB=0.0706737;RPB=0.475771;SGB=32.441;VDB=0.0403235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M1460I|1955|LOC_Os01g41070|protein_coding|CODING|LOC_Os01g41070.1|3|1) FN3310-S.SNP.1:23259995 chr01:023259995 0 W/23259995-23259995 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.999998;DP=2652;DP4=1246,1329,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0656109;MQB=0.896112;MQSB=0.225011;RPB=0.852477;SGB=39.2697;VDB=0.167284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1219C|1955|LOC_Os01g41070|protein_coding|CODING|LOC_Os01g41070.1|3|1) FN928-S.SNP.1:23263183 chr01:023263183 0 W/23263183-23263183 FN928-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN690-S.SNP.1:23263213 chr01:023263213 0 W/23263213-23263213 FN690-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1156-XA21.SNP.1:23268010 chr01:023268010 0 W/23268010-23268010 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN_N1-151-1.SNP.1:23274428 chr01:023274428 0 W/23274428-23274428 FN_N1-151-1 Single Base Substitution C-T INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN838-S.SNP.1:23275793 chr01:023275793 0 W/23275793-23275793 FN838-S Single Base Substitution C-A INTRON HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3517-S.SNP.1:23277845 chr01:023277845 0 W/23277845-23277845 FN3517-S SNP G -> C AC=2;AN=188;BQB=0.870201;DP=2749;DP4=1314,1349,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.28898e-13;MQSB=0.997128;RPB=0.997763;SGB=85.3253;VDB=0.0404557;EFF=INTRON(MODIFIER||||191|LOC_Os01g41100|protein_coding|CODING|LOC_Os01g41100.1|1|1) FN2380.SNP.1:23279643 chr01:023279643 0 W/23279643-23279643 FN2380 SNP G -> A AC=1;AN=192;BQB=0.810774;DP=4648;DP4=1815,2549,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000215146;MQB=3.12532e-06;MQSB=9.2703e-09;RPB=0.996675;SGB=29.087;VDB=0.14653;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.1:23284789 chr01:023284789 0 W/23284789-23284789 FN784-S Single Base Substitution G-A INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3885-S.SNP.1:23292218 chr01:023292218 0 W/23292218-23292218 FN3885-S SNP C -> T AC=1;AN=158;BQB=0.942649;DP=2748;DP4=1219,1399,13,18;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.87251e-18;MQSB=0.955417;RPB=0.0809364;SGB=130.087;VDB=0.0808763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D110N|192|LOC_Os01g41140|protein_coding|CODING|LOC_Os01g41140.1|2|1) FN1094-S.SNP.1:23297705 chr01:023297705 0 W/23297705-23297705 FN1094-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3515-S.SNP.1:23297858 chr01:023297858 0 W/23297858-23297858 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.976567;DP=3798;DP4=2143,1430,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.03906e-07;MQSB=0.396898;RPB=0.97755;SGB=53.7007;VDB=0.0787137;EFF=UTR_3_PRIME(MODIFIER||1341||111|LOC_Os01g41145|protein_coding|CODING|LOC_Os01g41145.1|1|1) FN875-S.SNP.1:23323550 chr01:023323550 0 W/23323550-23323550 FN875-S Single Base Substitution T-C INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN-152.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN-152 Single Base Substitution G-A INTERGENIC HOMO SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1103-S.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN1103-S Single Base Substitution G-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN460-S.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN460-S Single Base Substitution G-A INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN724-S.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN817-S.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN817-S Single Base Substitution G-A INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN873-S.SNP.1:23332079 chr01:023332079 0 W/23332079-23332079 FN873-S Single Base Substitution G-A INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN890-S.SNP.1:23365426 chr01:023365426 0 W/23365426-23365426 FN890-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g41290 OsFBD5 - F-box and FBD domain containing protein, expressed SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN3286-S.SNP.1:23370560 chr01:023370560 0 W/23370560-23370560 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.618567;DP=2443;DP4=1194,1104,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0151453;MQB=0.0108596;MQSB=0.273299;RPB=0.377237;SGB=23.2751;VDB=0.593461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.1:23371690 chr01:023371690 0 W/23371690-23371690 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.267158;DP=3698;DP4=1639,2021,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=31;MQ0F=0.0854516;MQB=0.344904;MQSB=2.96021e-11;RPB=0.918221;SGB=-40.0741;VDB=0.861286;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.1:23387307 chr01:023387307 0 W/23387307-23387307 FN-132 Single Base Substitution A-C INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN879-S.SNP.1:23390830 chr01:023390830 0 W/23390830-23390830 FN879-S Single Base Substitution T-G INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3606-S.SNP.1:23394147 chr01:023394147 0 W/23394147-23394147 FN3606-S SNP G -> C AC=1;AN=190;BQB=0.892822;DP=2584;DP4=1063,1435,2,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.22623e-08;MQSB=0.9247;RPB=0.871932;SGB=36.1006;VDB=0.912036;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L155|460|LOC_Os01g41340|protein_coding|CODING|LOC_Os01g41340.1|1|1) FN3720-S.SNP.1:23400631 chr01:023400631 0 W/23400631-23400631 FN3720-S SNP A -> C AC=1;AN=190;BQB=0.955099;DP=2885;DP4=1189,1579,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.07079e-05;MQSB=0.190773;RPB=0.908063;SGB=36.1006;VDB=0.925403;EFF=INTRON(MODIFIER||||410|LOC_Os01g41350|protein_coding|CODING|LOC_Os01g41350.1|3|1) FN3991-S.SNP.1:23403974 chr01:023403974 0 W/23403974-23403974 FN3991-S SNP C -> T AC=1;AN=168;BQB=0.567405;DP=2609;DP4=1321,1180,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14262e-05;MQSB=0.976639;RPB=0.819518;SGB=56.6036;VDB=0.0891378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A331V|379|LOC_Os01g41360|protein_coding|CODING|LOC_Os01g41360.1|3|1) FN2177-S.SNP.1:23405264 chr01:023405264 0 W/23405264-23405264 FN2177-S SNP A -> G AC=2;AN=168;BQB=0.0233563;DP=3891;DP4=1957,1879,27,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.80328e-23;MQSB=0.985365;RPB=0.44396;SGB=-54.3037;VDB=0.868548;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.1:23412500 chr01:023412500 0 W/23412500-23412500 FN633-S Single Base Substitution A-G INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3732-S.SNP.1:23413846 chr01:023413846 0 W/23413846-23413846 FN3732-S SNP G -> A AC=1;AN=190;BQB=0.997415;DP=2642;DP4=1342,1155,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.45036e-06;MQSB=0.863499;RPB=0.571251;SGB=53.6492;VDB=0.276712;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.1:23414678 chr01:023414678 0 W/23414678-23414678 FN781-S Single Base Substitution G-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2388.SNP.1:23421935 chr01:023421935 0 W/23421935-23421935 FN2388 SNP A -> T AC=1;AN=200;BQB=0.999298;DP=5182;DP4=2418,2550,7,11;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00250868;MQB=0.216158;MQSB=0.573362;RPB=0.296708;SGB=77.2904;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.1:23424981 chr01:023424981 0 W/23424981-23424981 FN4016-S SNP T -> G AC=2;AN=168;BQB=0.929921;DP=2590;DP4=1283,1224,18,15;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.0003861;MQB=1.91795e-17;MQSB=0.773533;RPB=0.968234;SGB=140.789;VDB=0.782182;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.1:23424982 chr01:023424982 0 W/23424982-23424982 FN4016-S SNP G -> T AC=2;AN=168;BQB=0.298562;DP=2569;DP4=1253,1201,19,16;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000389257;MQB=1.25001e-18;MQSB=0.812211;RPB=0.99766;SGB=70.8011;VDB=0.824995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.1:23430748 chr01:023430748 0 W/23430748-23430748 FN1212-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3776-S.SNP.1:23433671 chr01:023433671 0 W/23433671-23433671 FN3776-S SNP T -> C AC=2;AN=190;BQB=0.881216;DP=2963;DP4=1472,1287,26,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.97817e-14;MQSB=0.524369;RPB=0.488174;SGB=35.1887;VDB=0.199531;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.1:23436020 chr01:023436020 0 W/23436020-23436020 FN732-S Single Base Substitution T-G INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN427-S.SNP.1:23437239 chr01:023437239 0 W/23437239-23437239 FN427-S Single Base Substitution T-C INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2702-S.SNP.1:23444580 chr01:023444580 0 W/23444580-23444580 FN2702-S SNP T -> C AC=1;AN=200;BQB=0.220304;DP=4453;DP4=1845,2215,11,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.67097e-05;MQSB=0.0202398;RPB=0.991157;SGB=7.88476;VDB=0.958582;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.1:23446453 chr01:023446453 0 W/23446453-23446453 FN3871-S SNP T -> A AC=1;AN=158;BQB=0.973716;DP=2624;DP4=990,1483,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0;MQB=1.82125e-06;MQSB=0.765172;RPB=0.130613;SGB=57.6596;VDB=0.108963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.1:23454327 chr01:023454327 0 W/23454327-23454327 FN1268-S Single Base Substitution A-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN463-S.SNP.1:23457457 chr01:023457457 0 W/23457457-23457457 FN463-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g41430 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1583-S.SNP.1:23460032 chr01:023460032 0 W/23460032-23460032 FN1583-S Single Base Substitution C-T INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN4039-S.SNP.1:23460434 chr01:023460434 0 W/23460434-23460434 FN4039-S SNP C -> T AC=2;AN=168;BQB=0.403053;DP=2727;DP4=1353,1282,16,15;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0124679;MQB=0.00850693;MQSB=0.200119;RPB=0.916527;SGB=131.927;VDB=0.669636;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.1:23469717 chr01:023469717 0 W/23469717-23469717 FN4052-S SNP G -> A AC=1;AN=168;BQB=0.999701;DP=4565;DP4=2110,2299,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.00153341;MQB=0.0138386;MQSB=2.93481e-11;RPB=0.175689;SGB=78.7577;VDB=0.24565;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.1:23472682 chr01:023472682 0 W/23472682-23472682 FN2662-S SNP G -> T AC=1;AN=200;BQB=0.784696;DP=4650;DP4=2006,2315,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13947e-08;MQSB=0.988011;RPB=0.717394;SGB=33.0593;VDB=0.0172525;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G155V|703|LOC_Os01g41460|protein_coding|CODING|LOC_Os01g41460.1|1|1) FN1276-S.SNP.1:23486725 chr01:023486725 0 W/23486725-23486725 FN1276-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g41490 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2388.SNP.1:23492739 chr01:023492739 0 W/23492739-23492739 FN2388 SNP T -> G AC=1;AN=200;BQB=0.987053;DP=4733;DP4=2337,2137,15,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=9.738e-15;MQSB=0.736484;RPB=0.910329;SGB=97.9523;VDB=0.427066;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.1:23498957 chr01:023498957 0 W/23498957-23498957 FN764-S Single Base Substitution C-A INTRON HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN519-S.SNP.1:23500587 chr01:023500587 0 W/23500587-23500587 FN519-S Single Base Substitution A-G INTRON HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN1276-S.SNP.1:23510580 chr01:023510580 0 W/23510580-23510580 FN1276-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g41530 OsFBL2 - F-box domain and LRR containing protein, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2593-S.SNP.1:23510797 chr01:023510797 0 W/23510797-23510797 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.969342;DP=4559;DP4=2383,1967,27,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.90262e-27;MQSB=0.956097;RPB=0.38095;SGB=122.769;VDB=0.723231;EFF=INTRON(MODIFIER||||518|LOC_Os01g41530|protein_coding|CODING|LOC_Os01g41530.1|2|1) FN3601-S.SNP.1:23516883 chr01:023516883 0 W/23516883-23516883 FN3601-S SNP T -> C AC=2;AN=190;BQB=0.98749;DP=2471;DP4=1232,1104,11,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.91993e-12;MQSB=8.74106e-06;RPB=0.0448067;SGB=46.6446;VDB=0.195979;EFF=UTR_3_PRIME(MODIFIER||344||500|LOC_Os01g41550|protein_coding|CODING|LOC_Os01g41550.1|1|1) FN3601-S.SNP.1:23516922 chr01:023516922 0 W/23516922-23516922 FN3601-S SNP T -> A AC=2;AN=190;BQB=0.79383;DP=2408;DP4=1237,1058,12,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=8.79556e-11;MQSB=1.04718e-11;RPB=0.757081;SGB=75.1932;VDB=0.139027;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.1:23532254 chr01:023532254 0 W/23532254-23532254 FN-68 Single Base Substitution A-C INTRON HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN4124-S.SNP.1:23535269 chr01:023535269 0 W/23535269-23535269 FN4124-S SNP C -> T AC=2;AN=182;BQB=0.513012;DP=2513;DP4=1187,1237,11,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=7.92351e-08;MQSB=0.993278;RPB=0.798931;SGB=75.6874;VDB=0.788648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.1:23538371 chr01:023538371 0 W/23538371-23538371 FN2535-S SNP C -> G AC=1;AN=198;BQB=0.906727;DP=4031;DP4=2000,1773,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.76237e-07;MQSB=0.994177;RPB=0.865704;SGB=40.149;VDB=0.41004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.1:23541879 chr01:023541879 0 W/23541879-23541879 FN2597-S SNP A -> G AC=1;AN=198;BQB=0.484791;DP=4324;DP4=2343,1762,22,10;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=1.10626e-08;MQSB=0.0174679;RPB=0.993426;SGB=68.2711;VDB=0.858363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.1:23544967 chr01:023544967 0 W/23544967-23544967 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.917017;DP=3189;DP4=1608,1408,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=4.06668e-05;MQSB=0.9871;RPB=0.717239;SGB=35.1773;VDB=0.495905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.1:23550202 chr01:023550202 0 W/23550202-23550202 FN2355 SNP A -> G AC=1;AN=192;BQB=0.0665117;DP=4382;DP4=1687,1964,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0;MQB=3.92975e-06;MQSB=0.917032;RPB=0.924859;SGB=-39.6843;VDB=0.300985;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.1:23552980 chr01:023552980 0 W/23552980-23552980 FN4022-S SNP C -> A AC=1;AN=168;BQB=0.920002;DP=3101;DP4=1664,1322,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.38306e-11;MQSB=0.899979;RPB=0.999998;SGB=87.6193;VDB=0.946537;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A307|555|LOC_Os01g41600|protein_coding|CODING|LOC_Os01g41600.1|2|1) FN1658-S.SNP.1:23558315 chr01:023558315 0 W/23558315-23558315 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.942845;DP=3658;DP4=1926,1685,13,15;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0;MQB=0.000688073;MQSB=0.0810906;RPB=0.748584;SGB=56.5957;VDB=0.411078;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.1:23558315 chr01:023558315 0 W/23558315-23558315 FN2118-S SNP G -> A AC=2;AN=168;BQB=0.92731;DP=3823;DP4=1863,1893,32,19;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0;MQB=3.3283e-08;MQSB=0.91154;RPB=0.999362;SGB=165.119;VDB=0.786489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.1:23558315 chr01:023558315 0 W/23558315-23558315 FN3557-S SNP G -> A AC=2;AN=188;BQB=0.977188;DP=2557;DP4=1117,1282,15,13;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0;MQB=6.9129e-07;MQSB=0.677815;RPB=0.88349;SGB=121.672;VDB=0.534637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1622-S.SNP.1:23570377 chr01:023570377 0 W/23570377-23570377 FN1622-S Single Base Substitution A-T INTRON Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1622-S.SNP.1:23570379 chr01:023570379 0 W/23570379-23570379 FN1622-S Single Base Substitution G-T INTRON Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2309.SNP.1:23572388 chr01:023572388 0 W/23572388-23572388 FN2309 SNP A -> T AC=1;AN=192;BQB=0.995918;DP=5182;DP4=2405,2303,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.58306e-11;MQSB=0.53976;RPB=0.885504;SGB=16.7409;VDB=0.527699;EFF=INTRON(MODIFIER||||507|LOC_Os01g41630|protein_coding|CODING|LOC_Os01g41630.1|4|1) FN428-S.SNP.1:23592423 chr01:023592423 0 W/23592423-23592423 FN428-S Single Base Substitution C-T INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2084-S.SNP.1:23610257 chr01:023610257 0 W/23610257-23610257 FN2084-S SNP C -> A AC=2;AN=168;BQB=0.58625;DP=4110;DP4=1992,2039,28,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.6848e-28;MQSB=0.994368;RPB=0.834787;SGB=-619.948;VDB=0.828696;EFF=INTERGENIC(MODIFIER||||||||||1) FN709-S.SNP.1:23627748 chr01:023627748 0 W/23627748-23627748 FN709-S Single Base Substitution G-A INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN1214-S.SNP.1:23628514 chr01:023628514 0 W/23628514-23628514 FN1214-S Single Base Substitution T-G INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1214-S.SNP.1:23628515 chr01:023628515 0 W/23628515-23628515 FN1214-S Single Base Substitution T-C INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN837-S.SNP.1:23648659 chr01:023648659 0 W/23648659-23648659 FN837-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2704-S.SNP.1:23653042 chr01:023653042 0 W/23653042-23653042 FN2704-S SNP G -> A AC=2;AN=200;BQB=0.0413742;DP=4488;DP4=2270,1908,10,9;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=5.39515e-08;MQSB=0.0155898;RPB=0.809107;SGB=58.2954;VDB=0.865256;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.1:23658829 chr01:023658829 0 W/23658829-23658829 FN559-S Single Base Substitution C-T INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2117-S.SNP.1:23660389 chr01:023660389 0 W/23660389-23660389 FN2117-S SNP T -> A AC=1;AN=168;BQB=0.0898436;DP=3780;DP4=1835,1898,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.24969e-07;MQSB=0.96152;RPB=0.264384;SGB=-61.7914;VDB=0.532962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.1:23660390 chr01:023660390 0 W/23660390-23660390 FN2117-S SNP T -> A AC=1;AN=168;BQB=0.0478701;DP=3776;DP4=1827,1902,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12066e-07;MQSB=0.947371;RPB=0.674788;SGB=-61.7914;VDB=0.827729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.1:23666582 chr01:023666582 0 W/23666582-23666582 FN3615-S SNP G -> A AC=2;AN=190;BQB=0.831818;DP=2716;DP4=1439,1184,12,4;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0;MQB=1.35613e-05;MQSB=0.621615;RPB=0.842657;SGB=67.3108;VDB=0.769168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.1:23666699 chr01:023666699 0 W/23666699-23666699 FN2487 SNP T -> C AC=2;AN=200;BQB=0.596383;DP=3731;DP4=2172,1232,25,13;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0;MQB=7.77339e-18;MQSB=0.142164;RPB=0.790349;SGB=84.1935;VDB=0.0694858;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.1:23672359 chr01:023672359 0 W/23672359-23672359 FN727-S Single Base Substitution T-G INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN3440-S.SNP.1:23677017 chr01:023677017 0 W/23677017-23677017 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.927574;DP=2513;DP4=1365,1046,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.82842e-13;MQSB=0.997994;RPB=0.626928;SGB=45.9712;VDB=0.211999;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.1:23678144 chr01:023678144 0 W/23678144-23678144 FN949-S Single Base Substitution C-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2412.SNP.1:23679422 chr01:023679422 0 W/23679422-23679422 FN2412 SNP G -> T AC=1;AN=200;BQB=0.994194;DP=4670;DP4=2317,2145,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31386e-17;MQSB=0.917745;RPB=0.956335;SGB=97.9523;VDB=0.273247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.1:23686120 chr01:023686120 0 W/23686120-23686120 FN1665-S Single Base Substitution C-T INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN997-S.SNP.1:23688446 chr01:023688446 0 W/23688446-23688446 FN997-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g41834 chalcone synthase, putative, expressed SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN997-S.SNP.1:23688447 chr01:023688447 0 W/23688447-23688447 FN997-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g41834 chalcone synthase, putative, expressed SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN963-S.SNP.1:23693459 chr01:023693459 0 W/23693459-23693459 FN963-S Single Base Substitution A-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN427-S.SNP.1:23693797 chr01:023693797 0 W/23693797-23693797 FN427-S Single Base Substitution T-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1379-S.SNP.1:23696551 chr01:023696551 0 W/23696551-23696551 FN1379-S Single Base Substitution C-T INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN3294-S.SNP.1:23702221 chr01:023702221 0 W/23702221-23702221 FN3294-S SNP G -> C AC=1;AN=184;BQB=0.9303;DP=3803;DP4=1800,1893,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00473311;MQB=1.57549e-13;MQSB=0.0771149;RPB=0.591353;SGB=103.004;VDB=0.351116;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V65|111|LOC_Os01g41850|protein_coding|CODING|LOC_Os01g41850.1|3|1) FN3095-S.SNP.1:23705579 chr01:023705579 0 W/23705579-23705579 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.981131;DP=2954;DP4=1468,1348,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85042e-14;MQSB=0.754893;RPB=0.983887;SGB=78.0093;VDB=0.0386731;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.1:23705725 chr01:023705725 0 W/23705725-23705725 FN1690-S SNP A -> G AC=1;AN=188;BQB=0.997277;DP=2836;DP4=1447,1341,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36238e-08;MQSB=0.997525;RPB=0.989805;SGB=8.62479;VDB=0.77062;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.1:23712625 chr01:023712625 0 W/23712625-23712625 FN3536-S SNP G -> A AC=2;AN=188;BQB=0.224084;DP=2508;DP4=1325,1106,8,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000398724;MQB=1.2894e-05;MQSB=0.999118;RPB=0.982355;SGB=71.6954;VDB=0.568889;EFF=INTRON(MODIFIER||||67|LOC_Os01g41860|protein_coding|CODING|LOC_Os01g41860.1|1|1) FN4130-S.SNP.1:23714806 chr01:023714806 0 W/23714806-23714806 FN4130-S SNP C -> A AC=1;AN=182;BQB=0.999516;DP=3124;DP4=1472,1498,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0354e-06;MQSB=0.879876;RPB=0.808904;SGB=39.6007;VDB=0.887186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.1:23721885 chr01:023721885 0 W/23721885-23721885 FN2702-S SNP A -> G AC=1;AN=200;BQB=0.208411;DP=4958;DP4=2357,2379,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77136e-14;MQSB=0.997585;RPB=0.588099;SGB=19.1209;VDB=0.641515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.1:23722048 chr01:023722048 0 W/23722048-23722048 FN3447-S SNP T -> G AC=1;AN=184;BQB=0.631992;DP=2474;DP4=1135,1228,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.84989e-07;MQSB=0.992725;RPB=0.897942;SGB=42.7914;VDB=0.630955;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.1:23736625 chr01:023736625 0 W/23736625-23736625 FN-191 Single Base Substitution G-A INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN229-S.SNP.1:23740814 chr01:023740814 0 W/23740814-23740814 FN229-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1423-S.SNP.1:23742726 chr01:023742726 0 W/23742726-23742726 FN1423-S Single Base Substitution C-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3939-S.SNP.1:23748374 chr01:023748374 0 W/23748374-23748374 FN3939-S SNP G -> A AC=2;AN=158;BQB=0.925842;DP=2199;DP4=1011,1111,7,15;HOB=0.024996;ICB=0.493752;MQ=36;MQ0F=0;MQB=5.88226e-06;MQSB=0.836389;RPB=0.702111;SGB=64.3985;VDB=0.369476;EFF=INTRON(MODIFIER||||549|LOC_Os01g41890|protein_coding|CODING|LOC_Os01g41890.1|1|1) FN3355-S.SNP.1:23755260 chr01:023755260 0 W/23755260-23755260 FN3355-S SNP A -> G AC=2;AN=184;BQB=0.996081;DP=2859;DP4=1191,1500,18,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.71393e-19;MQSB=0.942436;RPB=0.65088;SGB=152.744;VDB=0.453717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.1:23756818 chr01:023756818 0 W/23756818-23756818 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.965028;DP=5137;DP4=2589,2387,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.97171e-05;MQSB=0.826249;RPB=0.852499;SGB=35.8441;VDB=0.584965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.1:23765272 chr01:023765272 0 W/23765272-23765272 FN2337 SNP C -> T AC=1;AN=192;BQB=0.0651739;DP=5222;DP4=2430,2435,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.91658e-06;MQSB=0.938221;RPB=0.684947;SGB=49.2105;VDB=0.964611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.1:23767168 chr01:023767168 0 W/23767168-23767168 FN2685-S SNP T -> C AC=1;AN=200;BQB=0.162314;DP=4838;DP4=2416,2272,8,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000206697;MQB=0.351425;MQSB=0.144623;RPB=0.185979;SGB=24.2746;VDB=0.585101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.1:23771061 chr01:023771061 0 W/23771061-23771061 FN1076-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g41910 receptor-like protein kinase 5 precursor, putative, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN692-S.SNP.1:23771899 chr01:023771899 0 W/23771899-23771899 FN692-S Single Base Substitution G-C INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2426.SNP.1:23788103 chr01:023788103 0 W/23788103-23788103 FN2426 SNP C -> A AC=1;AN=200;BQB=0.692994;DP=2827;DP4=627,2027,2,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000141388;MQSB=1.15992e-10;RPB=0.786208;SGB=19.0642;VDB=0.850956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F48L|2172|LOC_Os01g41960|protein_coding|CODING|LOC_Os01g41960.1|1|1) FN1048-S.SNP.1:23808945 chr01:023808945 0 W/23808945-23808945 FN1048-S Single Base Substitution C-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1541-S.SNP.1:23827064 chr01:023827064 0 W/23827064-23827064 FN1541-S Single Base Substitution C-A INTRON Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN1684-S.SNP.1:23831281 chr01:023831281 0 W/23831281-23831281 FN1684-S SNP C -> A AC=2;AN=188;BQB=0.308946;DP=3081;DP4=1563,1452,17,18;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=2.4951e-10;MQSB=0.254934;RPB=0.500418;SGB=34.8608;VDB=0.473138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.1:23837682 chr01:023837682 0 W/23837682-23837682 FN2273-S SNP C -> A AC=1;AN=190;BQB=0.487655;DP=4871;DP4=2395,2144,20,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205297;MQB=3.50012e-15;MQSB=0.973148;RPB=0.989807;SGB=-42.1241;VDB=0.990151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.1:23847275 chr01:023847275 0 W/23847275-23847275 FN2645-S SNP A -> T AC=1;AN=200;BQB=0.954865;DP=5011;DP4=2490,2236,10,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57621e-17;MQSB=0.997746;RPB=0.97963;SGB=97.9523;VDB=0.478496;EFF=INTRON(MODIFIER||||635|LOC_Os01g42060|protein_coding|CODING|LOC_Os01g42060.1|1|1) FN3886-S.SNP.1:23859921 chr01:023859921 0 W/23859921-23859921 FN3886-S SNP A -> G AC=1;AN=158;BQB=0.975233;DP=2599;DP4=1280,1262,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.74661e-11;MQSB=0.993284;RPB=0.893141;SGB=47.5512;VDB=0.871723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S576G|834|LOC_Os01g42080|protein_coding|CODING|LOC_Os01g42080.1|6|1) W246-5-1.SNP.1:23860439 chr01:023860439 0 W/23860439-23860439 W246-5-1 Single Base Substitution A-T INTRON HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.1:23860440 chr01:023860440 0 W/23860440-23860440 W246-5-1 Single Base Substitution G-T INTRON HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2627-S.SNP.1:23863897 chr01:023863897 0 W/23863897-23863897 FN2627-S SNP A -> G AC=1;AN=200;BQB=0.98772;DP=5283;DP4=2495,2551,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25003e-06;MQSB=0.688591;RPB=0.998403;SGB=26.8797;VDB=0.943312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.1:23872998 chr01:023872998 0 W/23872998-23872998 FN3374-S SNP G -> A AC=1;AN=184;BQB=0.971337;DP=2772;DP4=1181,1500,14,14;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.210678;MQB=0.994712;MQSB=1.0468e-05;RPB=0.372234;SGB=121.091;VDB=0.258158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.1:23874063 chr01:023874063 0 W/23874063-23874063 FN2677-S SNP G -> C AC=1;AN=200;BQB=0.311354;DP=4356;DP4=1941,2176,12,7;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.00826446;MQB=0.0314327;MQSB=4.6687e-14;RPB=0.743962;SGB=58.2954;VDB=0.288373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.1:23876110 chr01:023876110 0 W/23876110-23876110 FN1120-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1572-S.SNP.1:23876354 chr01:023876354 0 W/23876354-23876354 FN1572-S Single Base Substitution C-T INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN-116.SNP.1:23876557 chr01:023876557 0 W/23876557-23876557 FN-116 Single Base Substitution G-A INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN-294.SNP.1:23876649 chr01:023876649 0 W/23876649-23876649 FN-294 Single Base Substitution A-G INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3319-S.SNP.1:23883759 chr01:023883759 0 W/23883759-23883759 FN3319-S SNP G -> A AC=1;AN=184;BQB=0.997963;DP=2874;DP4=1441,1338,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83027e-08;MQSB=0.993202;RPB=0.208397;SGB=62.3078;VDB=0.550367;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E86|122|LOC_Os01g42120|protein_coding|CODING|LOC_Os01g42120.1|4|1) FN_N1-220-1.SNP.1:23913313 chr01:023913313 0 W/23913313-23913313 FN_N1-220-1 Single Base Substitution A-T Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3384-S.SNP.1:23923129 chr01:023923129 0 W/23923129-23923129 FN3384-S SNP A -> C AC=1;AN=184;BQB=0.669233;DP=3513;DP4=1788,1569,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.90753e-05;MQSB=0.376702;RPB=0.915082;SGB=48.7425;VDB=0.559446;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.1:23924428 chr01:023924428 0 W/23924428-23924428 FN_546-3-1 Single Base Substitution C-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN_546-3-1.SNP.1:23925345 chr01:023925345 0 W/23925345-23925345 FN_546-3-1 Single Base Substitution C-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1516-S.SNP.1:23925481 chr01:023925481 0 W/23925481-23925481 FN1516-S Single Base Substitution G-A INTRON Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN938-S.SNP.1:23929454 chr01:023929454 0 W/23929454-23929454 FN938-S Single Base Substitution T-C INTRON HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1696-S.SNP.1:23935720 chr01:023935720 0 W/23935720-23935720 FN1696-S SNP T -> G AC=1;AN=188;BQB=0.000845513;DP=3745;DP4=1939,1773,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.14552e-06;MQSB=0.947841;RPB=0.127579;SGB=-83.9838;VDB=0.720337;EFF=INTERGENIC(MODIFIER||||||||||1) FN1486-S.SNP.1:23955555 chr01:023955555 0 W/23955555-23955555 FN1486-S Single Base Substitution A-T SYNONYMOUS_CODING Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN2327.SNP.1:23958273 chr01:023958273 0 W/23958273-23958273 FN2327 SNP G -> T AC=1;AN=192;BQB=0.987322;DP=5200;DP4=2564,2364,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.47435e-06;MQSB=0.959946;RPB=0.884937;SGB=-13.64;VDB=0.917541;EFF=INTRON(MODIFIER||||811|LOC_Os01g42270|protein_coding|CODING|LOC_Os01g42270.1|8|1) FN-380.SNP.1:23958307 chr01:023958307 0 W/23958307-23958307 FN-380 Single Base Substitution A-G INTRON HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN-212.SNP.1:23965639 chr01:023965639 0 W/23965639-23965639 FN-212 Single Base Substitution G-C INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN888-S.SNP.1:23966817 chr01:023966817 0 W/23966817-23966817 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN424-S.SNP.1:23974691 chr01:023974691 0 W/23974691-23974691 FN424-S Single Base Substitution T-C INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1538-S.SNP.1:23977260 chr01:023977260 0 W/23977260-23977260 FN1538-S Single Base Substitution T-C INTRON HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2233-S.SNP.1:23980950 chr01:023980950 0 W/23980950-23980950 FN2233-S SNP G -> C AC=1;AN=190;BQB=0.925158;DP=3311;DP4=1695,1316,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000302024;MQB=9.49765e-07;MQSB=0.927541;RPB=0.993855;SGB=39.6545;VDB=0.0212216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L280V|684|LOC_Os01g42294|protein_coding|CODING|LOC_Os01g42294.1|1|1) FN-106.SNP.1:23986524 chr01:023986524 0 W/23986524-23986524 FN-106 Single Base Substitution C-T INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2220-S.SNP.1:23996758 chr01:023996758 0 W/23996758-23996758 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.0858455;DP=3720;DP4=1694,1554,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0182796;MQB=0.215146;MQSB=1.08197e-06;RPB=0.995764;SGB=-15.9914;VDB=0.392815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.1:23997231 chr01:023997231 0 W/23997231-23997231 FN3626-S SNP G -> T AC=1;AN=190;BQB=0.565411;DP=2567;DP4=1215,1222,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00029177;MQSB=0.0055718;RPB=0.847758;SGB=18.552;VDB=0.532627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.1:23997665 chr01:023997665 0 W/23997665-23997665 FN1528-S Single Base Substitution C-T INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN759-S.SNP.1:23997665 chr01:023997665 0 W/23997665-23997665 FN759-S Single Base Substitution C-T INTERGENIC HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN831-S.SNP.1:23997665 chr01:023997665 0 W/23997665-23997665 FN831-S Single Base Substitution C-T INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN3095-S.SNP.1:24000327 chr01:024000327 0 W/24000327-24000327 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.999933;DP=2891;DP4=1226,1565,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.37311e-05;MQSB=0.0057227;RPB=0.503517;SGB=25.1826;VDB=0.180595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.1:24004886 chr01:024004886 0 W/24004886-24004886 FN1115-S Single Base Substitution C-T INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN-40.SNP.1:24007303 chr01:024007303 0 W/24007303-24007303 FN-40 Single Base Substitution T-G INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN1234-S.SNP.1:24008688 chr01:024008688 0 W/24008688-24008688 FN1234-S Single Base Substitution T-C INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN3965-S.SNP.1:24008893 chr01:024008893 0 W/24008893-24008893 FN3965-S SNP G -> T AC=1;AN=168;BQB=0.825274;DP=2926;DP4=1114,1678,4,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09164e-10;MQSB=0.895116;RPB=0.618796;SGB=62.1945;VDB=0.880619;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.1:24012716 chr01:024012716 0 W/24012716-24012716 FN4188-S SNP T -> A AC=1;AN=170;BQB=0.670545;DP=2195;DP4=1165,940,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24295e-08;MQSB=0.959772;RPB=0.197297;SGB=19.8839;VDB=0.308651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.1:24022409 chr01:024022409 0 W/24022409-24022409 FN1333-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g42330 retrotransposon protein, putative, unclassified, expressed SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2573-S.SNP.1:24027694 chr01:024027694 0 W/24027694-24027694 FN2573-S SNP A -> T AC=2;AN=198;BQB=0.998562;DP=3611;DP4=1525,1345,11,9;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=7.48427e-08;MQSB=1.20562e-05;RPB=0.235505;SGB=37.1297;VDB=0.141548;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.1:24027809 chr01:024027809 0 W/24027809-24027809 FN1357-S Single Base Substitution C-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1369-S.SNP.1:24031522 chr01:024031522 0 W/24031522-24031522 FN1369-S Single Base Substitution A-C INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2558-S.SNP.1:24031559 chr01:024031559 0 W/24031559-24031559 FN2558-S SNP C -> T AC=1;AN=198;BQB=0.997916;DP=4292;DP4=2117,2005,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232992;MQB=3.74834e-12;MQSB=0.725779;RPB=0.934567;SGB=95.5;VDB=0.695844;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.1:24031943 chr01:024031943 0 W/24031943-24031943 FN460-S Single Base Substitution G-A INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2160-S.SNP.1:24036545 chr01:024036545 0 W/24036545-24036545 FN2160-S SNP C -> A AC=1;AN=168;BQB=0.00842646;DP=3564;DP4=2088,1448,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.85259e-05;MQSB=0.952662;RPB=0.841661;SGB=-55.5147;VDB=0.980586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.1:24044193 chr01:024044193 0 W/24044193-24044193 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.743521;DP=4784;DP4=2324,2186,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.60198e-07;MQSB=0.980314;RPB=0.924083;SGB=40.4492;VDB=0.953851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.1:24045119 chr01:024045119 0 W/24045119-24045119 FN2495 SNP A -> C AC=1;AN=200;BQB=0.18749;DP=4010;DP4=1344,2299,2,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68215e-08;MQSB=0.905198;RPB=0.798483;SGB=63.4749;VDB=0.91883;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.1:24058409 chr01:024058409 0 W/24058409-24058409 FN1120-S Single Base Substitution C-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN3838-S.SNP.1:24072577 chr01:024072577 0 W/24072577-24072577 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.834459;DP=2862;DP4=1464,1297,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07989e-08;MQSB=0.996373;RPB=0.876074;SGB=43.2083;VDB=0.331891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L217F|1444|LOC_Os01g42370|protein_coding|CODING|LOC_Os01g42370.1|3|1) FN3463-S.SNP.1:24074772 chr01:024074772 0 W/24074772-24074772 FN3463-S SNP C -> A AC=1;AN=184;BQB=0.950234;DP=2355;DP4=1169,1119,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.78772e-06;MQSB=0.98661;RPB=0.788491;SGB=35.1773;VDB=0.662733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.1:24085398 chr01:024085398 0 W/24085398-24085398 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.925284;DP=4120;DP4=1754,2173,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.8526e-17;MQSB=0.520476;RPB=0.689253;SGB=146.046;VDB=0.681445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.1:24087118 chr01:024087118 0 W/24087118-24087118 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.740219;DP=2393;DP4=1339,912,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.86253e-05;MQSB=0.18027;RPB=0.943916;SGB=49.5489;VDB=0.153225;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.1:24087277 chr01:024087277 0 W/24087277-24087277 FN-133 Single Base Substitution A-T INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN2779-S.SNP.1:24092928 chr01:024092928 0 W/24092928-24092928 FN2779-S SNP A -> G AC=1;AN=198;BQB=0.995055;DP=4413;DP4=2109,2068,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.07121e-16;MQSB=0.997356;RPB=0.864651;SGB=90.4807;VDB=0.858781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.1:24094948 chr01:024094948 0 W/24094948-24094948 FN2142-S SNP T -> C AC=1;AN=168;BQB=0.00593197;DP=3865;DP4=1564,2253,18,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.75824e-09;MQSB=0.796957;RPB=0.811277;SGB=-83.76;VDB=0.643098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.1:24097961 chr01:024097961 0 W/24097961-24097961 FN3730-S SNP T -> C AC=1;AN=190;BQB=0.99655;DP=2447;DP4=1094,1210,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21721e-07;MQSB=0.00101899;RPB=0.690181;SGB=46.7622;VDB=0.208075;EFF=INTERGENIC(MODIFIER||||||||||1) FN455-S.SNP.1:24099431 chr01:024099431 0 W/24099431-24099431 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN-71.SNP.1:24106645 chr01:024106645 0 W/24106645-24106645 FN-71 Single Base Substitution G-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN542-S.SNP.1:24117692 chr01:024117692 0 W/24117692-24117692 FN542-S Single Base Substitution T-A INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN3347-S.SNP.1:24118899 chr01:024118899 0 W/24118899-24118899 FN3347-S SNP T -> G AC=1;AN=184;BQB=0.998567;DP=2740;DP4=1421,1197,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.31661e-13;MQSB=0.945537;RPB=0.761699;SGB=98.4821;VDB=0.867641;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.1:24120221 chr01:024120221 0 W/24120221-24120221 FN980-S Single Base Substitution G-C INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN799-S.SNP.1:24120874 chr01:024120874 0 W/24120874-24120874 FN799-S Single Base Substitution C-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN799-S.SNP.1:24120880 chr01:024120880 0 W/24120880-24120880 FN799-S Single Base Substitution A-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN4103-S.SNP.1:24127514 chr01:024127514 0 W/24127514-24127514 FN4103-S SNP A -> T AC=1;AN=182;BQB=0.684093;DP=2876;DP4=1391,1386,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000162484;MQSB=0.937363;RPB=0.202157;SGB=18.0739;VDB=0.648709;EFF=INTRON(MODIFIER||||176|LOC_Os01g42430|protein_coding|CODING|LOC_Os01g42430.1|2|1) FN3347-S.SNP.1:24131006 chr01:024131006 0 W/24131006-24131006 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.601076;DP=3453;DP4=1483,1778,13,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49709e-18;MQSB=0.857965;RPB=0.995027;SGB=25.0638;VDB=0.448414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.1:24131007 chr01:024131007 0 W/24131007-24131007 FN3347-S SNP C -> A AC=1;AN=184;BQB=0.858703;DP=3462;DP4=1551,1798,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.45475e-14;MQSB=0.834276;RPB=0.995819;SGB=93.9603;VDB=0.424034;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.1:24132775 chr01:024132775 0 W/24132775-24132775 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN937-S.SNP.1:24136788 chr01:024136788 0 W/24136788-24136788 FN937-S Single Base Substitution T-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN3434-S.SNP.1:24144484 chr01:024144484 0 W/24144484-24144484 FN3434-S SNP A -> G AC=2;AN=184;BQB=0.893849;DP=2585;DP4=1205,1273,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.54872e-17;MQSB=0.968694;RPB=1;SGB=99.14;VDB=0.734833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:24149375 chr01:024149375 0 W/24149375-24149375 FN3360-S SNP T -> A AC=1;AN=184;BQB=0.767913;DP=2946;DP4=1457,1394,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11082e-08;MQSB=0.982594;RPB=0.919272;SGB=42.7914;VDB=0.262607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.1:24149914 chr01:024149914 0 W/24149914-24149914 FN2118-S SNP A -> G AC=1;AN=168;BQB=0.0782841;DP=4001;DP4=2335,1618,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.99466e-12;MQSB=0.998791;RPB=0.0146066;SGB=-45.1967;VDB=0.0694178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.1:24161707 chr01:024161707 0 W/24161707-24161707 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.958081;DP=5367;DP4=2812,2370,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34199e-08;MQSB=0.998878;RPB=0.759043;SGB=6.27959;VDB=0.668172;EFF=UTR_5_PRIME(MODIFIER||923||684|LOC_Os01g42490|protein_coding|CODING|LOC_Os01g42490.2|2|1),INTRON(MODIFIER||||903|LOC_Os01g42490|protein_coding|CODING|LOC_Os01g42490.1|2|1),INTRON(MODIFIER||||684|LOC_Os01g42490|protein_coding|CODING|LOC_Os01g42490.3|2|1) FN459-S.SNP.1:24169127 chr01:024169127 0 W/24169127-24169127 FN459-S Single Base Substitution T-A INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN4089-S.SNP.1:24174199 chr01:024174199 0 W/24174199-24174199 FN4089-S SNP C -> T AC=1;AN=182;BQB=0.965844;DP=2971;DP4=1571,1341,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.82018e-06;MQSB=0.982264;RPB=0.547457;SGB=35.0899;VDB=0.391945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.1:24176684 chr01:024176684 0 W/24176684-24176684 FN1103-S Single Base Substitution T-C INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1103-S.SNP.1:24176686 chr01:024176686 0 W/24176686-24176686 FN1103-S Single Base Substitution T-C INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN690-S.SNP.1:24183453 chr01:024183453 0 W/24183453-24183453 FN690-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g42520 expressed protein SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN-184.SNP.1:24185770 chr01:024185770 0 W/24185770-24185770 FN-184 Single Base Substitution G-A INTERGENIC HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-273.SNP.1:24185770 chr01:024185770 0 W/24185770-24185770 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2085-S.SNP.1:24185770 chr01:024185770 0 W/24185770-24185770 FN2085-S SNP G -> A AC=2;AN=168;BQB=0.857381;DP=1732;DP4=280,1388,4,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.50539e-10;MQSB=0.981351;RPB=0.842356;SGB=65.6253;VDB=0.598245;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.1:24185770 chr01:024185770 0 W/24185770-24185770 FN4260-S SNP G -> A AC=2;AN=170;BQB=0.370649;DP=2526;DP4=1197,1217,27,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.28187e-18;MQSB=0.92251;RPB=0.799389;SGB=158.239;VDB=0.698976;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.1:24186291 chr01:024186291 0 W/24186291-24186291 FN_829-2-5 Single Base Substitution C-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN765-S.SNP.1:24190957 chr01:024190957 0 W/24190957-24190957 FN765-S Single Base Substitution C-T INTERGENIC HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3298-S.SNP.1:24201692 chr01:024201692 0 W/24201692-24201692 FN3298-S SNP C -> T AC=1;AN=184;BQB=0.984259;DP=2344;DP4=1005,1249,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.91139e-06;MQSB=0.621499;RPB=0.250645;SGB=21.6609;VDB=0.20008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.1:24206313 chr01:024206313 0 W/24206313-24206313 FN2327 SNP C -> T AC=1;AN=192;BQB=0.392263;DP=4373;DP4=2090,2041,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.73102e-13;MQSB=0.243274;RPB=0.529772;SGB=68.2948;VDB=0.759916;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q102|230|LOC_Os01g42580|protein_coding|CODING|LOC_Os01g42580.1|2|1) FN-132.SNP.1:24209267 chr01:024209267 0 W/24209267-24209267 FN-132 Single Base Substitution T-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN-132.SNP.1:24209268 chr01:024209268 0 W/24209268-24209268 FN-132 Single Base Substitution C-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2215-S.SNP.1:24216845 chr01:024216845 0 W/24216845-24216845 FN2215-S SNP A -> G AC=1;AN=190;BQB=0.937701;DP=2818;DP4=1029,1344,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27123e-08;MQSB=0.971305;RPB=0.944644;SGB=18.552;VDB=0.922112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.1:24216848 chr01:024216848 0 W/24216848-24216848 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.423445;DP=2803;DP4=1157,1355,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.80541e-06;MQSB=0.879916;RPB=0.422984;SGB=13.4442;VDB=0.740319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.1:24217868 chr01:024217868 0 W/24217868-24217868 FN1636-S Single Base Substitution G-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN703-S.SNP.1:24223132 chr01:024223132 0 W/24223132-24223132 FN703-S Single Base Substitution C-A INTERGENIC HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3551-S.SNP.1:24240214 chr01:024240214 0 W/24240214-24240214 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.307267;DP=2604;DP4=1275,1129,12,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79489e-10;MQSB=0.985478;RPB=0.421277;SGB=17.8846;VDB=0.687859;EFF=UTR_3_PRIME(MODIFIER||2515||800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.1|4|1) FN3446-S.SNP.1:24240920 chr01:024240920 0 W/24240920-24240920 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.953471;DP=2909;DP4=1285,1519,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.10122e-07;MQSB=0.993904;RPB=0.888371;SGB=44.2207;VDB=0.819359;EFF=INTRON(MODIFIER||||800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.1|2|1) FN3484-S.SNP.1:24242776 chr01:024242776 0 W/24242776-24242776 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.993508;DP=2460;DP4=1209,1185,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59838e-06;MQSB=0.669357;RPB=0.991003;SGB=25.1826;VDB=0.754296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D786N|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D786N|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.1|1|1) FN1737-S.SNP.1:24243844 chr01:024243844 0 W/24243844-24243844 FN1737-S SNP A -> T AC=1;AN=188;BQB=0.819721;DP=3601;DP4=1453,2105,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06322e-06;MQSB=0.998919;RPB=0.827355;SGB=-13.9132;VDB=0.119845;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C430S|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C430S|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.1|1|1) FN2278-S.SNP.1:24244623 chr01:024244623 0 W/24244623-24244623 FN2278-S SNP C -> T AC=1;AN=190;BQB=0.495621;DP=3647;DP4=1801,1560,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06614e-05;MQSB=0.964394;RPB=0.919908;SGB=49.0954;VDB=0.551461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G170E|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G170E|800|LOC_Os01g42620|protein_coding|CODING|LOC_Os01g42620.1|1|1) FN-107.SNP.1:24260944 chr01:024260944 0 W/24260944-24260944 FN-107 Single Base Substitution A-G INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1062-S.SNP.1:24266153 chr01:024266153 0 W/24266153-24266153 FN1062-S Single Base Substitution C-T INTRON HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2230-S.SNP.1:24267255 chr01:024267255 0 W/24267255-24267255 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.362437;DP=4648;DP4=2158,2018,12,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000430293;MQB=2.96053e-12;MQSB=0.288787;RPB=0.104563;SGB=-7.12933;VDB=0.16666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.1:24269987 chr01:024269987 0 W/24269987-24269987 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.793018;DP=2847;DP4=1547,1216,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.8368e-07;MQSB=0.995892;RPB=0.277659;SGB=57.786;VDB=0.980269;EFF=INTRON(MODIFIER||||69|LOC_Os01g42670|protein_coding|CODING|LOC_Os01g42670.1|1|1) FN1234-S.SNP.1:24274675 chr01:024274675 0 W/24274675-24274675 FN1234-S Single Base Substitution C-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1234-S.SNP.1:24274677 chr01:024274677 0 W/24274677-24274677 FN1234-S Single Base Substitution C-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1234-S.SNP.1:24274682 chr01:024274682 0 W/24274682-24274682 FN1234-S Single Base Substitution C-T INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN2246-S.SNP.1:24288864 chr01:024288864 0 W/24288864-24288864 FN2246-S SNP G -> A AC=1;AN=190;BQB=0.971253;DP=5153;DP4=2132,2705,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.42526e-13;MQSB=0.400676;RPB=0.947608;SGB=-12.1142;VDB=0.588518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.1:24290469 chr01:024290469 0 W/24290469-24290469 FN3486-S SNP C -> T AC=1;AN=184;BQB=0.602657;DP=3038;DP4=1490,1401,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12665e-05;MQSB=0.999978;RPB=0.495442;SGB=32.2261;VDB=0.197412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN1122-S Single Base Substitution C-T INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1461-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN1461-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1561-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN1561-S Single Base Substitution C-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1707-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.515863;DP=1583;DP4=600,875,6,4;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.00132864;MQSB=0.027049;RPB=0.932312;SGB=10.8165;VDB=0.0359116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN2126-S SNP C -> T AC=2;AN=168;BQB=0.0331297;DP=2192;DP4=813,1221,21,15;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.06687e-07;MQSB=0.0294953;RPB=0.572254;SGB=-70.4354;VDB=0.499137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN2749-S SNP C -> T AC=2;AN=200;BQB=0.752422;DP=4488;DP4=2375,1773,9,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000222816;MQB=6.5451e-11;MQSB=0.819734;RPB=0.556079;SGB=95.7111;VDB=0.551557;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN3705-S SNP C -> T AC=2;AN=190;BQB=0.962309;DP=2383;DP4=1053,1152,8,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.71822e-08;MQSB=0.411559;RPB=0.9278;SGB=46.7622;VDB=0.257102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN3994-S SNP C -> T AC=2;AN=168;BQB=0.625837;DP=2514;DP4=1231,1084,14,14;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000397772;MQB=3.67812e-11;MQSB=0.324064;RPB=0.572186;SGB=21.3605;VDB=0.741507;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN846-S Single Base Substitution C-T INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN910-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN910-S Single Base Substitution C-T INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN957-S Single Base Substitution C-T INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN985-S.SNP.1:24292437 chr01:024292437 0 W/24292437-24292437 FN985-S Single Base Substitution C-T INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2781-S.SNP.1:24297818 chr01:024297818 0 W/24297818-24297818 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.943703;DP=4177;DP4=2055,1864,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239406;MQB=5.54241e-11;MQSB=0.87955;RPB=0.999202;SGB=58.1246;VDB=0.970166;EFF=INTRON(MODIFIER||||1463|LOC_Os01g42710|protein_coding|CODING|LOC_Os01g42710.1|2|1) FN2458.SNP.1:24321039 chr01:024321039 0 W/24321039-24321039 FN2458 SNP A -> T AC=1;AN=200;BQB=0.941761;DP=5149;DP4=2857,1963,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04612e-07;MQSB=0.940506;RPB=0.236248;SGB=16.4591;VDB=0.775148;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.1:24321485 chr01:024321485 0 W/24321485-24321485 FN3373-S SNP T -> C AC=1;AN=184;BQB=0.502967;DP=2894;DP4=1376,1408,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.65429e-05;MQSB=0.967086;RPB=0.158065;SGB=32.2261;VDB=0.396891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.1:24330842 chr01:024330842 0 W/24330842-24330842 FN2233-S SNP A -> T AC=1;AN=190;BQB=0.605065;DP=4579;DP4=1863,2278,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.20153e-09;MQSB=0.890261;RPB=0.24075;SGB=46.7622;VDB=0.206133;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:24331002 chr01:024331002 0 W/24331002-24331002 FN4114-S SNP T -> A AC=2;AN=182;BQB=0.846055;DP=2639;DP4=1318,1244,9,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.07808e-15;MQSB=0.995901;RPB=0.980374;SGB=98.2417;VDB=0.925785;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:24331008 chr01:024331008 0 W/24331008-24331008 FN4114-S SNP A -> T AC=2;AN=182;BQB=0.947503;DP=2640;DP4=1345,1241,9,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.63798e-14;MQSB=0.983377;RPB=0.996381;SGB=93.7308;VDB=0.862831;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.1:24332255 chr01:024332255 0 W/24332255-24332255 FN4160-S SNP G -> A AC=1;AN=170;BQB=0.962182;DP=2477;DP4=1353,1069,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.75519e-05;MQSB=0.998827;RPB=0.935614;SGB=25.6601;VDB=0.430692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.1:24338155 chr01:024338155 0 W/24338155-24338155 FN1559-S Single Base Substitution G-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3287-S.SNP.1:24344877 chr01:024344877 0 W/24344877-24344877 FN3287-S SNP C -> T AC=2;AN=184;BQB=0.970722;DP=3175;DP4=1582,1464,23,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30881e-21;MQSB=0.993543;RPB=0.682454;SGB=120.271;VDB=0.314664;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G89S|360|LOC_Os01g42780|protein_coding|CODING|LOC_Os01g42780.1|1|1) FN2380.SNP.1:24349834 chr01:024349834 0 W/24349834-24349834 FN2380 SNP C -> T AC=1;AN=192;BQB=0.359495;DP=4564;DP4=2097,2238,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.63092e-07;MQSB=0.528943;RPB=0.268624;SGB=36.2157;VDB=0.371239;EFF=INTERGENIC(MODIFIER||||||||||1) FN-19.SNP.1:24350603 chr01:024350603 0 W/24350603-24350603 FN-19 Single Base Substitution G-A INTERGENIC Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN3486-S.SNP.1:24352065 chr01:024352065 0 W/24352065-24352065 FN3486-S SNP C -> T AC=1;AN=184;BQB=0.988908;DP=3280;DP4=1335,1861,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000304878;MQB=1.48024e-05;MQSB=0.951342;RPB=0.993836;SGB=39.699;VDB=0.0905794;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T182|359|LOC_Os01g42790|protein_coding|CODING|LOC_Os01g42790.1|2|1) FN-388.SNP.1:24356291 chr01:024356291 0 W/24356291-24356291 FN-388 Single Base Substitution G-A INTRON HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN2675-S.SNP.1:24360526 chr01:024360526 0 W/24360526-24360526 FN2675-S SNP A -> C AC=1;AN=200;BQB=0.652622;DP=4658;DP4=2030,2188,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97258e-17;MQSB=0.946429;RPB=0.0742522;SGB=30.3571;VDB=0.163758;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.1:24365967 chr01:024365967 0 W/24365967-24365967 FN4096-S SNP C -> T AC=2;AN=182;BQB=0.988494;DP=3054;DP4=1369,1564,10,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.37937e-12;MQSB=0.945889;RPB=0.955839;SGB=89.2199;VDB=0.520471;EFF=INTRON(MODIFIER||||479|LOC_Os01g42810|protein_coding|CODING|LOC_Os01g42810.1|1|1) FN2096-S.SNP.1:24368722 chr01:024368722 0 W/24368722-24368722 FN2096-S SNP T -> A AC=1;AN=168;BQB=0.0190369;DP=4203;DP4=2186,1969,18,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.70524e-08;MQSB=0.966183;RPB=0.0571601;SGB=-244.607;VDB=0.951766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.1:24373514 chr01:024373514 0 W/24373514-24373514 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.962308;DP=4153;DP4=1918,2012,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.11248e-15;MQSB=0.999618;RPB=0.454328;SGB=94.0758;VDB=0.681129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.1:24375535 chr01:024375535 0 W/24375535-24375535 FN3710-S SNP A -> G AC=1;AN=190;BQB=0.99925;DP=2726;DP4=995,1574,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.73984e-06;MQSB=0.796449;RPB=0.998715;SGB=44.5415;VDB=0.948504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.1:24375631 chr01:024375631 0 W/24375631-24375631 FN-115 Single Base Substitution T-C INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3921-S.SNP.1:24377151 chr01:024377151 0 W/24377151-24377151 FN3921-S SNP T -> C AC=1;AN=158;BQB=0.354587;DP=2518;DP4=1245,1196,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000149424;MQSB=0.999704;RPB=0.57799;SGB=23.9652;VDB=0.448353;EFF=SPLICE_SITE_REGION(LOW||||310|LOC_Os01g42830|protein_coding|CODING|LOC_Os01g42830.1|4|1),INTRON(MODIFIER||||310|LOC_Os01g42830|protein_coding|CODING|LOC_Os01g42830.1|4|1) FN2657-S.SNP.1:24377951 chr01:024377951 0 W/24377951-24377951 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.459281;DP=5171;DP4=2533,2371,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78241e-12;MQSB=0.978486;RPB=0.630825;SGB=58.2954;VDB=0.0872291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E158K|310|LOC_Os01g42830|protein_coding|CODING|LOC_Os01g42830.1|7|1) FN3853-S.SNP.1:24388993 chr01:024388993 0 W/24388993-24388993 FN3853-S SNP G -> T AC=2;AN=158;BQB=0.823947;DP=2757;DP4=1549,1079,16,12;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000725426;MQB=1.99001e-09;MQSB=0.655011;RPB=0.878891;SGB=116.978;VDB=0.469081;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.1:24389029 chr01:024389029 0 W/24389029-24389029 FN875-S Single Base Substitution T-A INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3569-S.SNP.1:24389579 chr01:024389579 0 W/24389579-24389579 FN3569-S SNP A -> T AC=1;AN=188;BQB=0.721996;DP=3143;DP4=1497,1546,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000954502;MQB=3.01719e-08;MQSB=0.123149;RPB=0.251678;SGB=76.2387;VDB=0.267893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.1:24395283 chr01:024395283 0 W/24395283-24395283 FN2696-S SNP G -> T AC=1;AN=200;BQB=0.905312;DP=4526;DP4=2188,2084,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42903e-11;MQSB=0.611056;RPB=0.96464;SGB=37.3004;VDB=0.799558;EFF=UTR_3_PRIME(MODIFIER||10||446|LOC_Os01g42870|protein_coding|CODING|LOC_Os01g42870.1|2|1) FN3569-S.SNP.1:24397332 chr01:024397332 0 W/24397332-24397332 FN3569-S SNP T -> A AC=1;AN=188;BQB=0.864322;DP=2719;DP4=1482,1125,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.19693e-12;MQSB=0.614315;RPB=0.818182;SGB=71.4172;VDB=0.689882;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.1:24397333 chr01:024397333 0 W/24397333-24397333 FN3569-S SNP A -> T AC=1;AN=188;BQB=0.578014;DP=2720;DP4=1486,1119,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43867e-13;MQSB=0.586034;RPB=0.497126;SGB=71.4172;VDB=0.732367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.1:24398288 chr01:024398288 0 W/24398288-24398288 FN2328 SNP G -> A AC=1;AN=192;BQB=0.890233;DP=4848;DP4=2404,2180,21,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.31392e-20;MQSB=0.981909;RPB=0.950716;SGB=0.468728;VDB=0.731778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A264V|424|LOC_Os01g42880|protein_coding|CODING|LOC_Os01g42880.1|2|1) FN2750-S.SNP.1:24401002 chr01:024401002 0 W/24401002-24401002 FN2750-S SNP C -> T AC=2;AN=200;BQB=0.994048;DP=3989;DP4=1645,1934,12,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.07555e-14;MQSB=0.696408;RPB=0.543298;SGB=109.527;VDB=0.536239;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.1:24404124 chr01:024404124 0 W/24404124-24404124 FN740-S Single Base Substitution A-G INTERGENIC HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN806-S.SNP.1:24406459 chr01:024406459 0 W/24406459-24406459 FN806-S Single Base Substitution A-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN2771-S.SNP.1:24411672 chr01:024411672 0 W/24411672-24411672 FN2771-S SNP C -> G AC=1;AN=198;BQB=0.573078;DP=4168;DP4=1975,2024,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239923;MQB=1.85735e-11;MQSB=0.980764;RPB=0.992171;SGB=37.1297;VDB=0.82629;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.1:24413184 chr01:024413184 0 W/24413184-24413184 FN813-S Single Base Substitution C-T INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN760-S.SNP.1:24414941 chr01:024414941 0 W/24414941-24414941 FN760-S Single Base Substitution G-A INTERGENIC HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3796-S.SNP.1:24420380 chr01:024420380 0 W/24420380-24420380 FN3796-S SNP C -> T AC=1;AN=190;BQB=0.781078;DP=3067;DP4=1231,1736,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0355396;MQB=0.0142054;MQSB=2.08801e-22;RPB=0.991141;SGB=39.9877;VDB=0.10712;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.1:24422753 chr01:024422753 0 W/24422753-24422753 FN3294-S SNP G -> T AC=1;AN=184;BQB=0.969175;DP=3283;DP4=1457,1755,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0304599;MQB=7.10343e-05;MQSB=0.00041939;RPB=0.590769;SGB=25.1826;VDB=0.627244;EFF=SPLICE_SITE_REGION(LOW||||808|LOC_Os01g42920|protein_coding|CODING|LOC_Os01g42920.1|1|1),INTRON(MODIFIER||||808|LOC_Os01g42920|protein_coding|CODING|LOC_Os01g42920.1|1|1) FN3815-S.SNP.1:24425056 chr01:024425056 0 W/24425056-24425056 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.887056;DP=3097;DP4=1600,1348,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000322893;MQB=0.000227433;MQSB=0.4668;RPB=0.9585;SGB=39.9877;VDB=0.491369;EFF=INTRON(MODIFIER||||168|LOC_Os01g42934|protein_coding|CODING|LOC_Os01g42934.1|1|1) FN3881-S.SNP.1:24432096 chr01:024432096 0 W/24432096-24432096 FN3881-S SNP T -> C AC=2;AN=158;BQB=0.980195;DP=2134;DP4=1000,1068,13,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.8022e-10;MQSB=0.935507;RPB=0.808176;SGB=77.6532;VDB=0.370068;EFF=INTRON(MODIFIER||||812|LOC_Os01g42950|protein_coding|CODING|LOC_Os01g42950.1|7|1),INTRON(MODIFIER||||488|LOC_Os01g42950|protein_coding|CODING|LOC_Os01g42950.2|7|1),INTRON(MODIFIER||||397|LOC_Os01g42950|protein_coding|CODING|LOC_Os01g42950.3|7|1) FN1656-S.SNP.1:24433294 chr01:024433294 0 W/24433294-24433294 FN1656-S Single Base Substitution A-C INTRON HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN_1017-1.SNP.1:24434471 chr01:024434471 0 W/24434471-24434471 FN_1017-1 Single Base Substitution C-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN_1017-1.SNP.1:24434472 chr01:024434472 0 W/24434472-24434472 FN_1017-1 Single Base Substitution T-C HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2435.SNP.1:24437879 chr01:024437879 0 W/24437879-24437879 FN2435 SNP C -> T AC=1;AN=200;BQB=0.654342;DP=4622;DP4=2336,1960,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72682e-13;MQSB=0.599585;RPB=0.561018;SGB=45.1159;VDB=0.503661;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.1:24441897 chr01:024441897 0 W/24441897-24441897 FN3506-S SNP T -> C AC=1;AN=188;BQB=0.982073;DP=3320;DP4=1048,2076,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.9448e-09;MQSB=0.993092;RPB=0.227754;SGB=5.5382;VDB=0.0459823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.1:24444925 chr01:024444925 0 W/24444925-24444925 FN2355 SNP A -> G AC=1;AN=192;BQB=0.942506;DP=4486;DP4=2184,2035,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.83335e-09;MQSB=0.789068;RPB=0.830646;SGB=58.3392;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.1:24459524 chr01:024459524 0 W/24459524-24459524 FN903-S Single Base Substitution T-C INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN_N1-151-1.SNP.1:24463754 chr01:024463754 0 W/24463754-24463754 FN_N1-151-1 Single Base Substitution C-A INTRON HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN4124-S.SNP.1:24469649 chr01:024469649 0 W/24469649-24469649 FN4124-S SNP T -> A AC=1;AN=182;BQB=0.80906;DP=2707;DP4=1333,1241,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.81999e-13;MQSB=0.94692;RPB=0.913417;SGB=84.7091;VDB=0.341792;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.1:24469650 chr01:024469650 0 W/24469650-24469650 FN4124-S SNP T -> A AC=1;AN=182;BQB=0.556428;DP=2700;DP4=1336,1252,11,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.02514e-13;MQSB=0.927386;RPB=0.720585;SGB=43.231;VDB=0.307994;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.1:24482393 chr01:024482393 0 W/24482393-24482393 FN811-S Single Base Substitution T-C INTRON HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3491-S.SNP.1:24486739 chr01:024486739 0 W/24486739-24486739 FN3491-S SNP C -> T AC=1;AN=188;BQB=0.868517;DP=3254;DP4=1593,1545,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.78762e-07;MQSB=0.988532;RPB=0.833128;SGB=58.0655;VDB=0.76208;EFF=INTRON(MODIFIER||||649|LOC_Os01g42990|protein_coding|CODING|LOC_Os01g42990.1|2|1) FN_N1-213-1.SNP.1:24486937 chr01:024486937 0 W/24486937-24486937 FN_N1-213-1 Single Base Substitution G-A Homo LOC_Os01g42990 PPR repeat domain containing protein, putative, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3830-S.SNP.1:24489998 chr01:024489998 0 W/24489998-24489998 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.890727;DP=2757;DP4=1248,1381,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33833e-08;MQSB=0.735111;RPB=0.917798;SGB=71.8647;VDB=0.848082;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.1:24498579 chr01:024498579 0 W/24498579-24498579 FN858-S Single Base Substitution C-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN-257.SNP.1:24500602 chr01:024500602 0 W/24500602-24500602 FN-257 Single Base Substitution G-A INTRON HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN1677-S.SNP.1:24502428 chr01:024502428 0 W/24502428-24502428 FN1677-S SNP T -> C AC=1;AN=188;BQB=0.00592961;DP=3687;DP4=1771,1894,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.16065e-06;MQSB=0.977463;RPB=0.858019;SGB=-57.5324;VDB=0.958404;EFF=INTRON(MODIFIER||||605|LOC_Os01g43020|protein_coding|CODING|LOC_Os01g43020.1|4|1) FN1128-S.SNP.1:24506601 chr01:024506601 0 W/24506601-24506601 FN1128-S Single Base Substitution G-A INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1477-S.SNP.1:24507212 chr01:024507212 0 W/24507212-24507212 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2098-S.SNP.1:24507887 chr01:024507887 0 W/24507887-24507887 FN2098-S SNP A -> G AC=2;AN=168;BQB=0.995541;DP=3375;DP4=1877,1430,29,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.84278e-27;MQSB=0.985908;RPB=0.983713;SGB=-0.724748;VDB=0.766395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.1:24508979 chr01:024508979 0 W/24508979-24508979 FN2285 SNP C -> A AC=2;AN=192;BQB=0.493569;DP=4757;DP4=2377,2160,21,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000210217;MQB=4.72493e-22;MQSB=0.998458;RPB=0.394435;SGB=167.883;VDB=0.261304;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.1:24512984 chr01:024512984 0 W/24512984-24512984 FN1468-S Single Base Substitution C-A INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1033-S.SNP.1:24513201 chr01:024513201 0 W/24513201-24513201 FN1033-S Single Base Substitution C-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-68.SNP.1:24519409 chr01:024519409 0 W/24519409-24519409 FN-68 Single Base Substitution G-A INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3514-S.SNP.1:24521704 chr01:024521704 0 W/24521704-24521704 FN3514-S SNP T -> C AC=2;AN=188;BQB=0.964142;DP=2433;DP4=1137,1163,10,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.16776e-13;MQSB=0.851681;RPB=0.999647;SGB=71.4172;VDB=0.688068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.1:24521762 chr01:024521762 0 W/24521762-24521762 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.972219;DP=2278;DP4=1073,1111,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.80508e-06;MQSB=0.821021;RPB=0.699417;SGB=34.4498;VDB=0.947656;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.1:24523319 chr01:024523319 0 W/24523319-24523319 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.0897952;DP=3458;DP4=1673,1738,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.80085e-10;MQSB=0.953307;RPB=0.986374;SGB=-66.2726;VDB=0.358797;EFF=INTERGENIC(MODIFIER||||||||||1) FN619-S.SNP.1:24535111 chr01:024535111 0 W/24535111-24535111 FN619-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN2340.SNP.1:24536856 chr01:024536856 0 W/24536856-24536856 FN2340 SNP C -> T AC=1;AN=192;BQB=0.0226797;DP=5045;DP4=2440,2332,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.75464e-14;MQSB=0.941738;RPB=0.97494;SGB=-131.362;VDB=0.726781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E741K|909|LOC_Os01g43030|protein_coding|CODING|LOC_Os01g43030.1|22|1) FN936-S.SNP.1:24548810 chr01:024548810 0 W/24548810-24548810 FN936-S Single Base Substitution G-T INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN936-S.SNP.1:24548811 chr01:024548811 0 W/24548811-24548811 FN936-S Single Base Substitution C-T INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2583-S.SNP.1:24550580 chr01:024550580 0 W/24550580-24550580 FN2583-S SNP A -> C AC=1;AN=200;BQB=0.828288;DP=4782;DP4=2331,2223,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40792e-08;MQSB=0.705544;RPB=0.183748;SGB=19.0642;VDB=0.223035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.1:24550582 chr01:024550582 0 W/24550582-24550582 FN3796-S SNP C -> A AC=1;AN=190;BQB=0.977828;DP=2906;DP4=1395,1315,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30708e-07;MQSB=0.962742;RPB=0.671994;SGB=62.7569;VDB=0.234625;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.1:24557308 chr01:024557308 0 W/24557308-24557308 FN3326-S SNP T -> A AC=2;AN=184;BQB=0.68293;DP=3032;DP4=1350,1369,21,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.08495e-17;MQSB=0.927323;RPB=0.664315;SGB=130.836;VDB=0.642447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.1:24557905 chr01:024557905 0 W/24557905-24557905 FN3695-S SNP A -> G AC=1;AN=190;BQB=0.867388;DP=2750;DP4=1087,1454,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000227301;MQSB=0.962666;RPB=0.925224;SGB=39.9877;VDB=0.635403;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.1:24565401 chr01:024565401 0 W/24565401-24565401 FN669-S Single Base Substitution T-C INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3413-S.SNP.1:24577206 chr01:024577206 0 W/24577206-24577206 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.837793;DP=2950;DP4=1331,1471,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.79744e-05;MQSB=0.93987;RPB=0.144932;SGB=13.188;VDB=0.513951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.1:24582620 chr01:024582620 0 W/24582620-24582620 FN4234-S SNP T -> A AC=1;AN=170;BQB=0.948937;DP=2093;DP4=1113,919,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.51471e-08;MQSB=0.998829;RPB=0.129842;SGB=47.8722;VDB=0.137841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.1:24583616 chr01:024583616 0 W/24583616-24583616 FN3287-S SNP G -> A AC=2;AN=184;BQB=0.908853;DP=3166;DP4=1443,1551,22,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4146e-23;MQSB=0.724041;RPB=0.460021;SGB=141.402;VDB=0.615304;EFF=INTERGENIC(MODIFIER||||||||||1) FN-313.SNP.1:24596186 chr01:024596186 0 W/24596186-24596186 FN-313 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g43110 expressed protein SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1505-S.SNP.1:24609153 chr01:024609153 0 W/24609153-24609153 FN1505-S Single Base Substitution G-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3950-S.SNP.1:24610573 chr01:024610573 0 W/24610573-24610573 FN3950-S SNP G -> C AC=1;AN=168;BQB=0.922629;DP=2531;DP4=1326,1079,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=2.71103e-05;MQSB=0.642993;RPB=0.998608;SGB=52.1728;VDB=0.508616;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.1:24610911 chr01:024610911 0 W/24610911-24610911 FN565-S Single Base Substitution C-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2295.SNP.1:24611135 chr01:024611135 0 W/24611135-24611135 FN2295 SNP A -> T AC=1;AN=192;BQB=0.434434;DP=4980;DP4=2258,2389,14,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200803;MQB=3.10216e-20;MQSB=0.781463;RPB=0.928171;SGB=111.067;VDB=0.303111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.1:24624115 chr01:024624115 0 W/24624115-24624115 FN2286 SNP C -> T AC=1;AN=192;BQB=0.761308;DP=4653;DP4=2282,2135,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.87511e-09;MQSB=0.917709;RPB=0.926554;SGB=26.3496;VDB=0.94708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.1:24625957 chr01:024625957 0 W/24625957-24625957 FN2715-S SNP A -> G AC=1;AN=200;BQB=0.266166;DP=5039;DP4=2418,2444,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.69651e-14;MQSB=0.997231;RPB=0.827343;SGB=22.3313;VDB=0.831622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.1:24626018 chr01:024626018 0 W/24626018-24626018 FN3825-S SNP G -> A AC=1;AN=190;BQB=0.452143;DP=3005;DP4=1400,1457,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.80574e-12;MQSB=0.943566;RPB=0.382827;SGB=75.1932;VDB=0.693673;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.1:24636194 chr01:024636194 0 W/24636194-24636194 FN2729-S SNP T -> C AC=2;AN=200;BQB=0.810151;DP=4918;DP4=2503,2177,17,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.14212e-27;MQSB=0.83036;RPB=0.593633;SGB=51.2243;VDB=0.00291929;EFF=INTRON(MODIFIER||||448|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.2|4|1),INTRON(MODIFIER||||447|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.3|4|1),INTRON(MODIFIER||||554|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.1|3|1) FN2435.SNP.1:24636343 chr01:024636343 0 W/24636343-24636343 FN2435 SNP G -> A AC=1;AN=200;BQB=0.837071;DP=4788;DP4=2340,2158,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208855;MQB=3.0888e-19;MQSB=0.875126;RPB=0.99584;SGB=101.557;VDB=0.617486;EFF=INTRON(MODIFIER||||448|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.2|4|1),INTRON(MODIFIER||||447|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.3|4|1),INTRON(MODIFIER||||554|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.1|3|1) FN2166-S.SNP.1:24637362 chr01:024637362 0 W/24637362-24637362 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.631667;DP=3829;DP4=1824,1965,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.78965e-09;MQSB=0.996279;RPB=0.948533;SGB=-42.3508;VDB=0.131773;EFF=INTRON(MODIFIER||||448|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.2|4|1),INTRON(MODIFIER||||447|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.3|4|1),INTRON(MODIFIER||||554|LOC_Os01g43170|protein_coding|CODING|LOC_Os01g43170.1|3|1) FN1276-S.SNP.1:24656549 chr01:024656549 0 W/24656549-24656549 FN1276-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3713-S.SNP.1:24657506 chr01:024657506 0 W/24657506-24657506 FN3713-S SNP C -> A AC=1;AN=190;BQB=0.938138;DP=2612;DP4=1415,1091,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.73782e-07;MQSB=0.0670806;RPB=0.39804;SGB=44.5415;VDB=0.2216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.1:24657517 chr01:024657517 0 W/24657517-24657517 FN1384-S Single Base Substitution G-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3496-S.SNP.1:24665422 chr01:024665422 0 W/24665422-24665422 FN3496-S SNP A -> C AC=1;AN=188;BQB=0.999195;DP=2680;DP4=1197,1357,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04941e-08;MQSB=0.975727;RPB=0.923701;SGB=35.9843;VDB=0.684686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.1:24666887 chr01:024666887 0 W/24666887-24666887 FN1282-S Single Base Substitution G-A INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2407.SNP.1:24672291 chr01:024672291 0 W/24672291-24672291 FN2407 SNP C -> T AC=1;AN=200;BQB=0.833477;DP=4794;DP4=2544,1953,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11715e-12;MQSB=0.550857;RPB=0.999055;SGB=79.9264;VDB=0.98842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.1:24676634 chr01:024676634 0 W/24676634-24676634 FN3947-S SNP A -> G AC=1;AN=168;BQB=0.841463;DP=3152;DP4=1625,1423,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000317259;MQB=6.10833e-13;MQSB=0.956194;RPB=0.999936;SGB=93.0718;VDB=0.936233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.1:24680829 chr01:024680829 0 W/24680829-24680829 FN2651-S SNP A -> T AC=1;AN=200;BQB=0.978154;DP=4889;DP4=2456,2230,15,17;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.132338;MQB=0.826841;MQSB=3.11117e-13;RPB=0.794479;SGB=105.163;VDB=0.0468736;EFF=INTRON(MODIFIER||||989|LOC_Os01g43210|protein_coding|CODING|LOC_Os01g43210.1|3|1) FN2328.SNP.1:24685316 chr01:024685316 0 W/24685316-24685316 FN2328 SNP G -> A AC=1;AN=192;BQB=0.880425;DP=5021;DP4=2484,2286,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0171281;MQB=0.000328644;MQSB=0.00229738;RPB=0.830201;SGB=113.111;VDB=0.387982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V600I|989|LOC_Os01g43210|protein_coding|CODING|LOC_Os01g43210.1|8|1) FN1243-S.SNP.1:24687641 chr01:024687641 0 W/24687641-24687641 FN1243-S Single Base Substitution T-G INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-144.SNP.1:24690807 chr01:024690807 0 W/24690807-24690807 FN-144 Single Base Substitution G-A INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-144.SNP.1:24690808 chr01:024690808 0 W/24690808-24690808 FN-144 Single Base Substitution C-A INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-30.SNP.1:24695713 chr01:024695713 0 W/24695713-24695713 FN-30 Single Base Substitution T-C INTRON Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN-95.SNP.1:24698092 chr01:024698092 0 W/24698092-24698092 FN-95 Single Base Substitution T-G INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3693-S.SNP.1:24705967 chr01:024705967 0 W/24705967-24705967 FN3693-S SNP A -> G AC=1;AN=190;BQB=0.974032;DP=2879;DP4=1406,1360,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.15975e-08;MQSB=0.997513;RPB=0.548186;SGB=49.0954;VDB=0.643758;EFF=INTRON(MODIFIER||||324|LOC_Os01g43250|protein_coding|CODING|LOC_Os01g43250.1|5|1) FN1602-S.SNP.1:24733844 chr01:024733844 0 W/24733844-24733844 FN1602-S Single Base Substitution C-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN4234-S.SNP.1:24734267 chr01:024734267 0 W/24734267-24734267 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.99858;DP=1537;DP4=832,592,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.00132548;MQSB=0.573322;RPB=0.217634;SGB=43.4296;VDB=0.396784;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.1:24739687 chr01:024739687 0 W/24739687-24739687 FN942-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g43280 hydroquinone glucosyltransferase, putative, expressed SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2165-S.SNP.1:24741250 chr01:024741250 0 W/24741250-24741250 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.683566;DP=2982;DP4=1472,1436,14,16;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=1.82464e-06;MQSB=0.777458;RPB=0.772404;SGB=-44.6276;VDB=0.814533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.1:24743018 chr01:024743018 0 W/24743018-24743018 FN3425-S SNP C -> T AC=1;AN=184;BQB=0.99374;DP=1491;DP4=693,706,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.132797;MQB=0.508877;MQSB=0;RPB=0.368075;SGB=18.2315;VDB=0.0600709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.1:24744468 chr01:024744468 0 W/24744468-24744468 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.869238;DP=3439;DP4=1657,1577,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0110497;MQB=1.84201e-08;MQSB=0.00604908;RPB=0.978585;SGB=57.8907;VDB=0.0326617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A87V|336|LOC_Os01g43300|protein_coding|CODING|LOC_Os01g43300.1|1|1) FN3502-S.SNP.1:24746497 chr01:024746497 0 W/24746497-24746497 FN3502-S SNP C -> T AC=2;AN=188;BQB=0.977554;DP=4271;DP4=1969,2201,13,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.95723e-20;MQSB=0.823064;RPB=0.609987;SGB=171.648;VDB=0.343536;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.1:24757078 chr01:024757078 0 W/24757078-24757078 FN389-S Single Base Substitution G-A INTRON HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3373-S.SNP.1:24759701 chr01:024759701 0 W/24759701-24759701 FN3373-S SNP G -> C AC=1;AN=184;BQB=0.291953;DP=3055;DP4=1550,1361,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.12185e-12;MQSB=0.951624;RPB=0.978239;SGB=-13.6704;VDB=0.480465;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.1:24759702 chr01:024759702 0 W/24759702-24759702 FN3373-S SNP G -> A AC=1;AN=184;BQB=0.949921;DP=3055;DP4=1547,1379,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.71969e-10;MQSB=0.938735;RPB=0.775355;SGB=62.3078;VDB=0.479998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.1:24760932 chr01:024760932 0 W/24760932-24760932 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.855645;DP=4044;DP4=1892,1950,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01946e-10;MQSB=0.998376;RPB=0.82915;SGB=58.1246;VDB=0.84247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.1:24762649 chr01:024762649 0 W/24762649-24762649 FN2412 SNP G -> A AC=1;AN=200;BQB=0.99742;DP=4350;DP4=2035,2122,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.43506e-07;MQSB=0.445351;RPB=0.272116;SGB=54.2646;VDB=0.275752;EFF=UTR_3_PRIME(MODIFIER||884||807|LOC_Os01g43330|protein_coding|CODING|LOC_Os01g43330.1|6|1) FN1175-S.SNP.1:24764052 chr01:024764052 0 W/24764052-24764052 FN1175-S Single Base Substitution T-A INTRON HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN465-S.SNP.1:24766179 chr01:024766179 0 W/24766179-24766179 FN465-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g43330 extra-large G-protein-related, putative, expressed SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2387.SNP.1:24774492 chr01:024774492 0 W/24774492-24774492 FN2387 SNP C -> G AC=1;AN=192;BQB=0.497947;DP=5053;DP4=2043,2638,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.7723e-18;MQSB=0.55957;RPB=0.559209;SGB=-6.30345;VDB=0.514938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A111G|1313|LOC_Os01g43340|protein_coding|CODING|LOC_Os01g43340.1|1|1) FN2316.SNP.1:24775480 chr01:024775480 0 W/24775480-24775480 FN2316 SNP A -> G AC=1;AN=192;BQB=0.992433;DP=4990;DP4=2540,2146,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0406814;MQB=0.304354;MQSB=3.11959e-11;RPB=0.284133;SGB=75.4235;VDB=0.197286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T318A|1313|LOC_Os01g43340|protein_coding|CODING|LOC_Os01g43340.1|2|1) FN1465-S.SNP.1:24777146 chr01:024777146 0 W/24777146-24777146 FN1465-S Single Base Substitution G-T INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1465-S.SNP.1:24777147 chr01:024777147 0 W/24777147-24777147 FN1465-S Single Base Substitution C-T INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3353-S.SNP.1:24780817 chr01:024780817 0 W/24780817-24780817 FN3353-S SNP C -> T AC=2;AN=184;BQB=0.998142;DP=4038;DP4=1346,2522,10,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.67874e-25;MQSB=0.98219;RPB=0.962875;SGB=170.831;VDB=0.0499336;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.1:24780818 chr01:024780818 0 W/24780818-24780818 FN3353-S SNP G -> T AC=2;AN=184;BQB=0.968101;DP=4053;DP4=1349,2571,10,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.56823e-23;MQSB=0.972667;RPB=0.938598;SGB=157.265;VDB=0.0423502;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:24798578 chr01:024798578 0 W/24798578-24798578 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN767-S.SNP.1:24803720 chr01:024803720 0 W/24803720-24803720 FN767-S Single Base Substitution G-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2479.SNP.1:24829076 chr01:024829076 0 W/24829076-24829076 FN2479 SNP C -> T AC=1;AN=200;BQB=0.990206;DP=2482;DP4=1068,1274,5,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000402901;MQB=1.95353e-06;MQSB=1.11195e-05;RPB=0.0521756;SGB=33.0593;VDB=0.0320581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.1:24829079 chr01:024829079 0 W/24829079-24829079 FN2479 SNP T -> A AC=1;AN=200;BQB=0.563747;DP=2512;DP4=955,1098,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000398089;MQB=1.47023e-07;MQSB=2.30105e-05;RPB=0.180649;SGB=33.0593;VDB=0.130558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.1:24829082 chr01:024829082 0 W/24829082-24829082 FN2479 SNP G -> A AC=1;AN=200;BQB=0.985513;DP=2523;DP4=1054,1196,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000396354;MQB=1.60839e-06;MQSB=2.38397e-05;RPB=0.218092;SGB=49.6594;VDB=0.0924411;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.1:24830361 chr01:024830361 0 W/24830361-24830361 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN1686-S.SNP.1:24830824 chr01:024830824 0 W/24830824-24830824 FN1686-S SNP G -> A AC=1;AN=188;BQB=0.240183;DP=2464;DP4=1246,1183,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.135958;MQB=0.991029;MQSB=7.69718e-14;RPB=0.940496;SGB=-36.9078;VDB=0.209342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:24832974 chr01:024832974 0 W/24832974-24832974 FN2235-S SNP A -> G AC=1;AN=190;BQB=0.999875;DP=4955;DP4=2598,2143,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000285786;MQSB=0.0744529;RPB=0.768757;SGB=53.6492;VDB=0.696823;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.1:24838306 chr01:024838306 0 W/24838306-24838306 FN910-S Single Base Substitution G-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2467.SNP.1:24841153 chr01:024841153 0 W/24841153-24841153 FN2467 SNP C -> T AC=1;AN=200;BQB=0.843512;DP=4893;DP4=2538,2088,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90336e-17;MQSB=0.990969;RPB=0.984195;SGB=132.552;VDB=0.532562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R306W|518|LOC_Os01g43410|protein_coding|CODING|LOC_Os01g43410.1|3|1) FN-115.SNP.1:24844740 chr01:024844740 0 W/24844740-24844740 FN-115 Single Base Substitution C-T INTRON HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3797-S.SNP.1:24844952 chr01:024844952 0 W/24844952-24844952 FN3797-S SNP A -> G AC=1;AN=190;BQB=0.924631;DP=2942;DP4=1332,1485,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07302e-06;MQSB=0.721834;RPB=0.00537913;SGB=35.4339;VDB=0.00676979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F170L|306|LOC_Os01g43420|protein_coding|CODING|LOC_Os01g43420.1|5|1) FN3469-S.SNP.1:24849602 chr01:024849602 0 W/24849602-24849602 FN3469-S SNP C -> T AC=1;AN=184;BQB=0.300837;DP=2693;DP4=1417,1145,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.14094e-06;MQSB=0.996927;RPB=0.995073;SGB=66.8296;VDB=0.990752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.1:24858136 chr01:024858136 0 W/24858136-24858136 FN2584-S SNP G -> A AC=2;AN=198;BQB=0.919197;DP=4260;DP4=1977,2027,34,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.17353e-35;MQSB=0.998419;RPB=0.386394;SGB=209.741;VDB=0.597088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:24860678 chr01:024860678 0 W/24860678-24860678 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.426433;DP=3157;DP4=1357,1613,2,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87078e-08;MQSB=0.900301;RPB=0.977645;SGB=4.11112;VDB=0.215992;EFF=INTRON(MODIFIER||||178|LOC_Os01g43450|protein_coding|CODING|LOC_Os01g43450.1|1|1) FN3826-S.SNP.1:24860679 chr01:024860679 0 W/24860679-24860679 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.11769;DP=3143;DP4=1356,1580,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000517167;MQSB=0.951191;RPB=0.850473;SGB=2.55724;VDB=0.239607;EFF=INTRON(MODIFIER||||178|LOC_Os01g43450|protein_coding|CODING|LOC_Os01g43450.1|1|1) FN2271-S.SNP.1:24869766 chr01:024869766 0 W/24869766-24869766 FN2271-S SNP T -> C AC=1;AN=190;BQB=0.181431;DP=4306;DP4=1724,1981,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000232234;MQB=1.76973e-17;MQSB=0.46799;RPB=0.886331;SGB=64.5217;VDB=0.11935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.1:24873329 chr01:024873329 0 W/24873329-24873329 FN2580-S SNP A -> G AC=1;AN=198;BQB=0.998424;DP=4472;DP4=2123,2117,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08695e-05;MQSB=0.998574;RPB=0.999652;SGB=49.5489;VDB=0.972662;EFF=INTERGENIC(MODIFIER||||||||||1) FN709-S.SNP.1:24892908 chr01:024892908 0 W/24892908-24892908 FN709-S Single Base Substitution C-T INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN-281.SNP.1:24900146 chr01:024900146 0 W/24900146-24900146 FN-281 Single Base Substitution C-A INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2724-S.SNP.1:24900792 chr01:024900792 0 W/24900792-24900792 FN2724-S SNP C -> G AC=1;AN=200;BQB=0.999999;DP=4506;DP4=2113,2125,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71882e-06;MQSB=0.945981;RPB=0.992127;SGB=35.8441;VDB=0.67338;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R302|418|LOC_Os01g43490|protein_coding|CODING|LOC_Os01g43490.1|2|1) FN1606-S.SNP.1:24912376 chr01:024912376 0 W/24912376-24912376 FN1606-S Single Base Substitution C-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1423-S.SNP.1:24921674 chr01:024921674 0 W/24921674-24921674 FN1423-S Single Base Substitution G-T INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. W500-4-7-1.SNP.1:24924128 chr01:024924128 0 W/24924128-24924128 W500-4-7-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN403-S.SNP.1:24925229 chr01:024925229 0 W/24925229-24925229 FN403-S Single Base Substitution G-A INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN836-S.SNP.1:24928219 chr01:024928219 0 W/24928219-24928219 FN836-S Single Base Substitution C-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2662-S.SNP.1:24931857 chr01:024931857 0 W/24931857-24931857 FN2662-S SNP T -> C AC=1;AN=200;BQB=0.901673;DP=5239;DP4=2548,2497,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.93083e-11;MQSB=0.947971;RPB=0.758973;SGB=34.6953;VDB=0.303916;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.1:24935618 chr01:024935618 0 W/24935618-24935618 FN1763-S SNP G -> A AC=2;AN=188;BQB=0.218757;DP=3669;DP4=1868,1767,11,15;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0;MQB=0.028866;MQSB=0.102752;RPB=0.977567;SGB=82.0471;VDB=0.573531;EFF=INTERGENIC(MODIFIER||||||||||1) FN-275.SNP.1:24948092 chr01:024948092 0 W/24948092-24948092 FN-275 Single Base Substitution G-A INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-275.SNP.1:24948094 chr01:024948094 0 W/24948094-24948094 FN-275 Single Base Substitution G-T INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2108-S.SNP.1:24954180 chr01:024954180 0 W/24954180-24954180 FN2108-S SNP C -> G AC=1;AN=168;BQB=0.398149;DP=2907;DP4=1527,1352,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40691e-10;MQSB=0.986059;RPB=0.960493;SGB=-90.3546;VDB=0.167762;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.1:24954639 chr01:024954639 0 W/24954639-24954639 FN-262 Single Base Substitution T-C INTERGENIC HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-341.SNP.1:24954639 chr01:024954639 0 W/24954639-24954639 FN-341 Single Base Substitution T-C INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1402-S.SNP.1:24954639 chr01:024954639 0 W/24954639-24954639 FN1402-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN_789-3-1.SNP.1:24954639 chr01:024954639 0 W/24954639-24954639 FN_789-3-1 Single Base Substitution T-C INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN-248.SNP.1:24958491 chr01:024958491 0 W/24958491-24958491 FN-248 Single Base Substitution G-C INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN244-S.SNP.1:24958491 chr01:024958491 0 W/24958491-24958491 FN244-S Single Base Substitution G-C INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3534-S.SNP.1:24958491 chr01:024958491 0 W/24958491-24958491 FN3534-S SNP G -> C AC=2;AN=188;BQB=0.989918;DP=2486;DP4=1761,629,22,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.57657e-16;MQSB=0.977625;RPB=0.80473;SGB=135.302;VDB=0.672855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.1:24958491 chr01:024958491 0 W/24958491-24958491 FN3803-S SNP G -> C AC=2;AN=190;BQB=0.749445;DP=1994;DP4=1415,487,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.56397e-13;MQSB=0.951196;RPB=0.820556;SGB=99.1879;VDB=0.432318;EFF=INTERGENIC(MODIFIER||||||||||1) FN-412.SNP.1:24963494 chr01:024963494 0 W/24963494-24963494 FN-412 Single Base Substitution C-T INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN412-S.SNP.1:24963494 chr01:024963494 0 W/24963494-24963494 FN412-S Single Base Substitution C-T INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2546-S.SNP.1:24976631 chr01:024976631 0 W/24976631-24976631 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.906388;DP=3949;DP4=1962,1833,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.95388e-06;MQSB=0.849346;RPB=0.933412;SGB=29.3637;VDB=0.35125;EFF=INTRON(MODIFIER||||163|LOC_Os01g43600|protein_coding|CODING|LOC_Os01g43600.1|2|1) FN3450-S.SNP.1:24978454 chr01:024978454 0 W/24978454-24978454 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.875208;DP=2763;DP4=1539,1141,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79493e-08;MQSB=0.990798;RPB=0.40885;SGB=35.7479;VDB=0.722375;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.1:24981622 chr01:024981622 0 W/24981622-24981622 FN2335 SNP T -> C AC=1;AN=192;BQB=0.950722;DP=4514;DP4=1786,2057,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68595e-07;MQSB=0.38557;RPB=0.911227;SGB=8.91915;VDB=0.361542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I326V|366|LOC_Os01g43610|protein_coding|CODING|LOC_Os01g43610.1|1|1) FN754-S.SNP.1:24983173 chr01:024983173 0 W/24983173-24983173 FN754-S Single Base Substitution C-T INTERGENIC HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN692-S.SNP.1:24985921 chr01:024985921 0 W/24985921-24985921 FN692-S Single Base Substitution C-G INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN1243-S.SNP.1:24986905 chr01:024986905 0 W/24986905-24986905 FN1243-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN545-S.SNP.1:24995083 chr01:024995083 0 W/24995083-24995083 FN545-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g43630 adaptin, putative, expressed SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1423-S.SNP.1:25001002 chr01:025001002 0 W/25001002-25001002 FN1423-S Single Base Substitution A-T INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3831-S.SNP.1:25006554 chr01:025006554 0 W/25006554-25006554 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.197389;DP=2495;DP4=1069,1311,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35088e-07;MQSB=0.873147;RPB=0.912662;SGB=2.55724;VDB=0.252077;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.1:25012027 chr01:025012027 0 W/25012027-25012027 FN895-S Single Base Substitution A-G INTRON HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3401-S.SNP.1:25017148 chr01:025017148 0 W/25017148-25017148 FN3401-S SNP T -> G AC=2;AN=184;BQB=0.966148;DP=2545;DP4=1141,1271,23,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.52241e-21;MQSB=0.899826;RPB=0.0356949;SGB=169.916;VDB=0.362732;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:25018099 chr01:025018099 0 W/25018099-25018099 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN951-S.SNP.1:25018100 chr01:025018100 0 W/25018100-25018100 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2696-S.SNP.1:25028924 chr01:025028924 0 W/25028924-25028924 FN2696-S SNP A -> T AC=1;AN=200;BQB=0.99931;DP=5083;DP4=2658,2178,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21358e-14;MQSB=0.966726;RPB=0.920516;SGB=20.7261;VDB=0.869233;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.1:25030464 chr01:025030464 0 W/25030464-25030464 705-6 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os01g43680 CPuORF29 - conserved peptide uORF-containing transcript, expressed SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN3396-S.SNP.1:25031432 chr01:025031432 0 W/25031432-25031432 FN3396-S SNP G -> A AC=1;AN=184;BQB=0.961628;DP=2809;DP4=1310,1422,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19058e-07;MQSB=0.997567;RPB=0.932722;SGB=53.2642;VDB=0.708747;EFF=INTRON(MODIFIER||||245|LOC_Os01g43680|protein_coding|CODING|LOC_Os01g43680.1|3|1),INTRON(MODIFIER||||245|LOC_Os01g43680|protein_coding|CODING|LOC_Os01g43680.2|3|1),INTRON(MODIFIER||||245|LOC_Os01g43680|protein_coding|CODING|LOC_Os01g43680.3|3|1) FN1071-S.SNP.1:25031456 chr01:025031456 0 W/25031456-25031456 FN1071-S Single Base Substitution A-T INTRON HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN4249-S.SNP.1:25036745 chr01:025036745 0 W/25036745-25036745 FN4249-S SNP C -> A AC=1;AN=170;BQB=0.953724;DP=2485;DP4=1185,1240,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53532e-05;MQSB=0.998988;RPB=0.91728;SGB=24.5502;VDB=0.597417;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.1:25039721 chr01:025039721 0 W/25039721-25039721 FN3353-S SNP A -> T AC=2;AN=184;BQB=0.820332;DP=3229;DP4=1541,1563,15,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.70285e-17;MQSB=0.999996;RPB=0.555382;SGB=99.14;VDB=0.180897;EFF=INTRON(MODIFIER||||173|LOC_Os01g43690|protein_coding|CODING|LOC_Os01g43690.1|1|1) FN-308.SNP.1:25047343 chr01:025047343 0 W/25047343-25047343 FN-308 Single Base Substitution T-C INTRON HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN-207.SNP.1:25049994 chr01:025049994 0 W/25049994-25049994 FN-207 Single Base Substitution C-T INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2609-S.SNP.1:25052000 chr01:025052000 0 W/25052000-25052000 FN2609-S SNP A -> G AC=1;AN=198;BQB=0.795719;DP=4548;DP4=2389,1955,18,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.26704e-23;MQSB=0.70752;RPB=0.663007;SGB=130.027;VDB=0.0710457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.1:25061217 chr01:025061217 0 W/25061217-25061217 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.905004;DP=4093;DP4=1353,2455,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.1482e-10;MQSB=0.0945607;RPB=0.680603;SGB=54.5295;VDB=0.607884;EFF=INTRON(MODIFIER||||534|LOC_Os01g43740|protein_coding|CODING|LOC_Os01g43740.1|1|1) FN437-S.SNP.1:25064654 chr01:025064654 0 W/25064654-25064654 FN437-S Single Base Substitution T-G INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN1416-S.SNP.1:25070611 chr01:025070611 0 W/25070611-25070611 FN1416-S Single Base Substitution T-G INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN2324.SNP.1:25079322 chr01:025079322 0 W/25079322-25079322 FN2324 SNP G -> T AC=2;AN=192;BQB=0.255147;DP=4573;DP4=1990,2148,21,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00043735;MQB=1.19957e-16;MQSB=0.0091675;RPB=0.351934;SGB=125.324;VDB=0.403423;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.1:25079463 chr01:025079463 0 W/25079463-25079463 FN_543-2-6 Single Base Substitution A-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1304-S.SNP.1:25079687 chr01:025079687 0 W/25079687-25079687 FN1304-S Single Base Substitution C-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN835-S.SNP.1:25080822 chr01:025080822 0 W/25080822-25080822 FN835-S Single Base Substitution C-A INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2200-S.SNP.1:25081812 chr01:025081812 0 W/25081812-25081812 FN2200-S SNP G -> A AC=2;AN=190;BQB=0.323666;DP=3269;DP4=1349,1377,19,22;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000305904;MQB=8.5558e-16;MQSB=0.205858;RPB=0.252347;SGB=-1.03669;VDB=0.183594;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.1:25084005 chr01:025084005 0 W/25084005-25084005 FN902-S Single Base Substitution C-T INTERGENIC HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1383-S.SNP.1:25094315 chr01:025094315 0 W/25094315-25094315 FN1383-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os01g43790 transposon protein, putative, unclassified SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3488-S.SNP.1:25094315 chr01:025094315 0 W/25094315-25094315 FN3488-S SNP G -> A AC=1;AN=184;BQB=0.995246;DP=3676;DP4=1861,1687,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.32307e-06;MQSB=1.27468e-15;RPB=0.924955;SGB=32.2261;VDB=0.809805;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R94*|104|LOC_Os01g43790|protein_coding|CODING|LOC_Os01g43790.1|1|1) FN521-S.SNP.1:25098383 chr01:025098383 0 W/25098383-25098383 FN521-S Single Base Substitution C-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN521-S.SNP.1:25098384 chr01:025098384 0 W/25098384-25098384 FN521-S Single Base Substitution A-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3419-S.SNP.1:25103373 chr01:025103373 0 W/25103373-25103373 FN3419-S SNP G -> A AC=2;AN=184;BQB=0.795758;DP=4531;DP4=1951,2350,24,19;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0136835;MQB=0.126322;MQSB=1.22918e-40;RPB=0.737565;SGB=188.918;VDB=0.17326;EFF=INTRON(MODIFIER||||1724|LOC_Os01g43800|protein_coding|CODING|LOC_Os01g43800.1|2|1) FN1301-S.SNP.1:25104552 chr01:025104552 0 W/25104552-25104552 FN1301-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g43800 retrotransposon protein, putative, unclassified, expressed SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3828-S.SNP.1:25106364 chr01:025106364 0 W/25106364-25106364 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.97736;DP=3366;DP4=1598,1677,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0109923;MQB=5.54801e-08;MQSB=0.780862;RPB=0.902761;SGB=71.8647;VDB=0.363131;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P1717T|1724|LOC_Os01g43800|protein_coding|CODING|LOC_Os01g43800.1|4|1) FN3828-S.SNP.1:25106365 chr01:025106365 0 W/25106365-25106365 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.814656;DP=3374;DP4=1598,1678,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0106698;MQB=1.03425e-06;MQSB=0.714156;RPB=0.905258;SGB=28.7675;VDB=0.418533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P1717L|1724|LOC_Os01g43800|protein_coding|CODING|LOC_Os01g43800.1|4|1) FN3828-S.SNP.1:25106366 chr01:025106366 0 W/25106366-25106366 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.988714;DP=3360;DP4=1582,1681,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00952381;MQB=5.10435e-08;MQSB=0.965924;RPB=0.994272;SGB=62.7569;VDB=0.579506;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1717|1724|LOC_Os01g43800|protein_coding|CODING|LOC_Os01g43800.1|4|1) 701-3.SNP.1:25107691 chr01:025107691 0 W/25107691-25107691 701-3 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g43820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN-232.SNP.1:25107927 chr01:025107927 0 W/25107927-25107927 FN-232 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g43820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3804-S.SNP.1:25113948 chr01:025113948 0 W/25113948-25113948 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.993621;DP=2855;DP4=1398,1329,15,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09079e-11;MQSB=0.976597;RPB=0.915144;SGB=41.5369;VDB=0.640954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.1:25115789 chr01:025115789 0 W/25115789-25115789 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.556111;DP=2650;DP4=2122,325,12,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.01582e-08;MQSB=0.0252738;RPB=0.648303;SGB=53.6492;VDB=0.905928;EFF=INTRON(MODIFIER||||531|LOC_Os01g43844|protein_coding|CODING|LOC_Os01g43844.1|1|1) FN696-S.SNP.1:25116275 chr01:025116275 0 W/25116275-25116275 FN696-S Single Base Substitution T-C INTRON HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-248.SNP.1:25132925 chr01:025132925 0 W/25132925-25132925 FN-248 Single Base Substitution T-C UTR_5_PRIME HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN4258-S.SNP.1:25143456 chr01:025143456 0 W/25143456-25143456 FN4258-S SNP G -> C AC=1;AN=170;BQB=0.975506;DP=2539;DP4=1058,1410,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.70297e-10;MQSB=0.831046;RPB=0.32913;SGB=41.7633;VDB=0.185215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.1:25146124 chr01:025146124 0 W/25146124-25146124 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.846248;DP=4989;DP4=2603,1966,23,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53844e-14;MQSB=0.930792;RPB=0.644484;SGB=-5.84819;VDB=0.723481;EFF=UTR_3_PRIME(MODIFIER||225||452|LOC_Os01g43890|protein_coding|CODING|LOC_Os01g43890.1|1|1) FN2207-S.SNP.1:25147851 chr01:025147851 0 W/25147851-25147851 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.750921;DP=4888;DP4=2484,2075,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000409165;MQB=1.89104e-09;MQSB=0.320035;RPB=0.841542;SGB=26.2136;VDB=0.128717;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.1:25148550 chr01:025148550 0 W/25148550-25148550 W385-6-8-4 Single Base Substitution G-A INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2364.SNP.1:25149127 chr01:025149127 0 W/25149127-25149127 FN2364 SNP T -> G AC=1;AN=192;BQB=0.999414;DP=5560;DP4=2632,2619,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.32611e-13;MQSB=0.956582;RPB=0.784003;SGB=86.1165;VDB=0.191759;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.1:25151918 chr01:025151918 0 W/25151918-25151918 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2096-S.SNP.1:25159238 chr01:025159238 0 W/25159238-25159238 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.326149;DP=2160;DP4=912,1190,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.16376e-10;MQSB=0.993063;RPB=0.628003;SGB=-68.0681;VDB=0.407246;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.1:25164190 chr01:025164190 0 W/25164190-25164190 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.927195;DP=2564;DP4=1225,1253,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05157e-05;MQSB=0.996196;RPB=0.823697;SGB=38.987;VDB=0.397567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.1:25171583 chr01:025171583 0 W/25171583-25171583 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.524699;DP=2505;DP4=1166,968,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000399202;MQB=0.0581904;MQSB=4.93666e-19;RPB=0.999481;SGB=15.9981;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.1:25171832 chr01:025171832 0 W/25171832-25171832 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.931396;DP=2755;DP4=1340,1265,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.41747e-11;MQSB=0.992267;RPB=0.902208;SGB=28.1658;VDB=0.168521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.1:25173579 chr01:025173579 0 W/25173579-25173579 FN2177-S SNP A -> G AC=1;AN=168;BQB=0.0129731;DP=3155;DP4=1511,1614,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.70724e-06;MQSB=0.169837;RPB=0.851188;SGB=-58.653;VDB=0.562573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.1:25174919 chr01:025174919 0 W/25174919-25174919 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.946075;DP=2621;DP4=1309,1195,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00953834;MQB=3.21778e-06;MQSB=0.974965;RPB=1;SGB=53.3568;VDB=0.295676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A311T|954|LOC_Os01g43930|protein_coding|CODING|LOC_Os01g43930.1|3|1) FN2461.SNP.1:25177499 chr01:025177499 0 W/25177499-25177499 FN2461 SNP G -> A AC=1;AN=200;BQB=0.934228;DP=5159;DP4=2517,2281,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.43082e-15;MQSB=0.999977;RPB=0.733579;SGB=52.9314;VDB=0.499439;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.1:25177626 chr01:025177626 0 W/25177626-25177626 FN805-S Single Base Substitution A-G INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1665-S.SNP.1:25203049 chr01:025203049 0 W/25203049-25203049 FN1665-S Single Base Substitution T-A INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1670-S.SNP.1:25204192 chr01:025204192 0 W/25204192-25204192 FN1670-S SNP A -> T AC=1;AN=188;BQB=0.294829;DP=2511;DP4=1519,965,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.3504e-06;MQSB=0.929074;RPB=0.187378;SGB=20.9896;VDB=0.623451;EFF=INTRON(MODIFIER||||1440|LOC_Os01g43980|protein_coding|CODING|LOC_Os01g43980.1|2|1) FN_1017-1.SNP.1:25208184 chr01:025208184 0 W/25208184-25208184 FN_1017-1 Single Base Substitution G-A HET LOC_Os01g43980 retrotransposon protein, putative, unclassified, expressed SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3805-S.SNP.1:25208292 chr01:025208292 0 W/25208292-25208292 FN3805-S SNP G -> T AC=1;AN=190;BQB=0.927037;DP=2641;DP4=1345,1209,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.12543e-05;MQSB=0.946109;RPB=0.91727;SGB=39.9877;VDB=0.667402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R667I|1440|LOC_Os01g43980|protein_coding|CODING|LOC_Os01g43980.1|8|1) FN3460-S.SNP.1:25217160 chr01:025217160 0 W/25217160-25217160 FN3460-S SNP T -> C AC=1;AN=184;BQB=0.973395;DP=2884;DP4=1269,1545,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.49699e-07;MQSB=0.854439;RPB=0.671629;SGB=44.2207;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.1:25219404 chr01:025219404 0 W/25219404-25219404 FN389-S Single Base Substitution A-G INTERGENIC HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2564-S.SNP.1:25237557 chr01:025237557 0 W/25237557-25237557 FN2564-S SNP G -> A AC=1;AN=198;BQB=0.826788;DP=4271;DP4=2022,1977,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24714e-06;MQSB=0.86665;RPB=0.818834;SGB=32.9588;VDB=0.681875;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q369|384|LOC_Os01g44050|protein_coding|CODING|LOC_Os01g44050.1|6|1) FN3819-S.SNP.1:25238353 chr01:025238353 0 W/25238353-25238353 FN3819-S SNP G -> T AC=1;AN=190;BQB=0.870986;DP=2548;DP4=1215,1277,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80313e-09;MQSB=0.996127;RPB=0.936429;SGB=58.2031;VDB=0.717994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.1:25240615 chr01:025240615 0 W/25240615-25240615 FN3309-S SNP A -> G AC=2;AN=184;BQB=0.737633;DP=2909;DP4=1246,1528,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47923e-11;MQSB=0.0734399;RPB=0.999929;SGB=53.5365;VDB=0.300749;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.1:25242634 chr01:025242634 0 W/25242634-25242634 FN-127 Single Base Substitution G-A INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN4133-S.SNP.1:25243310 chr01:025243310 0 W/25243310-25243310 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.983441;DP=2633;DP4=1406,1150,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.98191e-08;MQSB=0.962721;RPB=0.99771;SGB=57.644;VDB=0.76967;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.1:25245073 chr01:025245073 0 W/25245073-25245073 FN723-S Single Base Substitution T-G INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2362.SNP.1:25245828 chr01:025245828 0 W/25245828-25245828 FN2362 SNP G -> C AC=1;AN=192;BQB=0.775555;DP=5027;DP4=2709,2026,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.32745e-12;MQSB=0.990542;RPB=0.630659;SGB=34.0426;VDB=0.26159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.1:25246791 chr01:025246791 0 W/25246791-25246791 FN3807-S SNP T -> G AC=1;AN=190;BQB=0.8796;DP=2293;DP4=951,1235,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00043611;MQB=5.29184e-06;MQSB=0.0163734;RPB=0.59391;SGB=62.7569;VDB=0.295495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN1035-S Single Base Substitution A-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1272-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN1272-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1718-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN1718-S SNP A -> T AC=2;AN=188;BQB=0.0296702;DP=3823;DP4=1922,1814,29,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06205e-12;MQSB=0.98972;RPB=0.770084;SGB=-705.521;VDB=0.200544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.508197;DP=5037;DP4=2557,2022,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000397062;MQB=2.70918e-09;MQSB=0.781224;RPB=0.278468;SGB=43.2083;VDB=0.230248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN2553-S SNP A -> T AC=1;AN=198;BQB=0.338156;DP=4511;DP4=2247,1947,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.05302e-05;MQSB=1;RPB=0.978784;SGB=26.5745;VDB=0.168254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN3419-S SNP A -> T AC=2;AN=184;BQB=0.789536;DP=3017;DP4=1754,1091,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.40856e-15;MQSB=0.785607;RPB=0.997756;SGB=92.0965;VDB=0.682281;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN4074-S SNP A -> T AC=1;AN=182;BQB=0.988679;DP=2837;DP4=1812,896,14,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.72349e-09;MQSB=0.877821;RPB=0.65749;SGB=28.1658;VDB=0.601724;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.1:25247238 chr01:025247238 0 W/25247238-25247238 FN711-S Single Base Substitution A-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN3842-S.SNP.1:25248045 chr01:025248045 0 W/25248045-25248045 FN3842-S SNP G -> C AC=2;AN=190;BQB=0.924459;DP=2906;DP4=1623,1155,23,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.9921e-16;MQSB=0.838297;RPB=0.967053;SGB=149.281;VDB=0.421567;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.1:25251061 chr01:025251061 0 W/25251061-25251061 FN596-S Single Base Substitution C-T INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN3701-S.SNP.1:25251079 chr01:025251079 0 W/25251079-25251079 FN3701-S SNP T -> C AC=1;AN=190;BQB=0.486392;DP=3344;DP4=1718,1533,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12579e-06;MQSB=0.818936;RPB=0.853874;SGB=32.5467;VDB=0.675843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.1:25253872 chr01:025253872 0 W/25253872-25253872 FN2354 SNP A -> C AC=1;AN=192;BQB=0.998106;DP=4955;DP4=2500,2131,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.56564e-13;MQSB=0.963834;RPB=0.835922;SGB=51.9931;VDB=0.0830019;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.1:25261992 chr01:025261992 0 W/25261992-25261992 FN358-S Single Base Substitution T-G INTRON HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3394-S.SNP.1:25267154 chr01:025267154 0 W/25267154-25267154 FN3394-S SNP C -> A AC=1;AN=184;BQB=0.973202;DP=3027;DP4=1469,1427,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00066072;MQB=0.0253356;MQSB=0.00874923;RPB=0.805751;SGB=30.6558;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.1:25273995 chr01:025273995 0 W/25273995-25273995 FN1252-S Single Base Substitution G-T INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3326-S.SNP.1:25276457 chr01:025276457 0 W/25276457-25276457 FN3326-S SNP T -> C AC=2;AN=184;BQB=0.310742;DP=2497;DP4=1284,1106,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.36304e-10;MQSB=0.981544;RPB=0.973208;SGB=51.0148;VDB=0.454271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.1:25285964 chr01:025285964 0 W/25285964-25285964 FN2411 SNP G -> A AC=1;AN=200;BQB=0.133912;DP=5049;DP4=2486,2333,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000198059;MQB=1.93136e-16;MQSB=0.918402;RPB=0.906658;SGB=83.5316;VDB=0.354593;EFF=INTRON(MODIFIER||||509|LOC_Os01g44110|protein_coding|CODING|LOC_Os01g44110.1|8|1) FN4249-S.SNP.1:25286586 chr01:025286586 0 W/25286586-25286586 FN4249-S SNP T -> A AC=1;AN=170;BQB=0.991676;DP=2276;DP4=928,1303,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.43556e-05;MQSB=0.958387;RPB=0.987415;SGB=30.1021;VDB=0.755557;EFF=UTR_3_PRIME(MODIFIER||482||509|LOC_Os01g44110|protein_coding|CODING|LOC_Os01g44110.1|9|1) FN2097-S.SNP.1:25287089 chr01:025287089 0 W/25287089-25287089 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.924833;DP=3677;DP4=1796,1821,20,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000271961;MQB=1.12918e-19;MQSB=0.99096;RPB=0.822332;SGB=-6.32537;VDB=0.39678;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.1:25294021 chr01:025294021 0 W/25294021-25294021 FN1266-S Single Base Substitution T-G INTRON HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2676-S.SNP.1:25294885 chr01:025294885 0 W/25294885-25294885 FN2676-S SNP C -> T AC=2;AN=200;BQB=0.422056;DP=4759;DP4=2081,2209,19,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.55615e-32;MQSB=0.887069;RPB=0.996242;SGB=136.297;VDB=0.718867;EFF=INTRON(MODIFIER||||562|LOC_Os01g44130|protein_coding|CODING|LOC_Os01g44130.1|11|1) FN1652-S.SNP.1:25304244 chr01:025304244 0 W/25304244-25304244 FN1652-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os01g44150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2621-S.SNP.1:25305521 chr01:025305521 0 W/25305521-25305521 FN2621-S SNP A -> T AC=1;AN=200;BQB=0.758925;DP=4523;DP4=2207,2085,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.68778e-17;MQSB=0.998328;RPB=0.974987;SGB=-40.8432;VDB=0.11935;EFF=STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R322*|1481|LOC_Os01g44150|protein_coding|CODING|LOC_Os01g44150.1|4|1);LOF=(LOC_Os01g44150|LOC_Os01g44150|1|1.00);NMD=(LOC_Os01g44150|LOC_Os01g44150|1|1.00) FN-283.SNP.1:25310024 chr01:025310024 0 W/25310024-25310024 FN-283 Single Base Substitution A-G INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2171-S.SNP.1:25313521 chr01:025313521 0 W/25313521-25313521 FN2171-S SNP G -> A AC=1;AN=168;BQB=0.00716451;DP=2817;DP4=1259,1533,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17075e-05;MQSB=0.986874;RPB=0.849342;SGB=-36.0898;VDB=0.994879;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.1:25316267 chr01:025316267 0 W/25316267-25316267 FN762-S Single Base Substitution A-G INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN-157.SNP.1:25318253 chr01:025318253 0 W/25318253-25318253 FN-157 Single Base Substitution C-T INTRON HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.1:25318255 chr01:025318255 0 W/25318255-25318255 FN-157 Single Base Substitution C-T INTRON HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN4080-S.SNP.1:25319009 chr01:025319009 0 W/25319009-25319009 FN4080-S SNP C -> T AC=1;AN=182;BQB=0.955051;DP=2607;DP4=1195,1345,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.5685e-09;MQSB=0.961482;RPB=0.994096;SGB=18.1224;VDB=0.562181;EFF=INTRON(MODIFIER||||475|LOC_Os01g44170|protein_coding|CODING|LOC_Os01g44170.1|2|1) FN2767-S.SNP.1:25324327 chr01:025324327 0 W/25324327-25324327 FN2767-S SNP T -> G AC=1;AN=198;BQB=0.30429;DP=3753;DP4=1665,1903,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.16941e-12;MQSB=0.950498;RPB=0.691254;SGB=81.7147;VDB=0.218703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.1:25327493 chr01:025327493 0 W/25327493-25327493 FN3455-S SNP T -> A AC=2;AN=184;BQB=0.990027;DP=2431;DP4=1162,1160,7,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.55182e-09;MQSB=0.968203;RPB=0.972286;SGB=66.8296;VDB=0.955739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.1:25329488 chr01:025329488 0 W/25329488-25329488 FN2375 SNP C -> T AC=1;AN=192;BQB=0.474127;DP=3942;DP4=2087,1574,11,4;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0690005;MQB=0.00474883;MQSB=0.0284686;RPB=0.879581;SGB=4.22611;VDB=0.443967;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.1:25344272 chr01:025344272 0 W/25344272-25344272 FN953-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN_955-1.SNP.1:25347502 chr01:025347502 0 W/25347502-25347502 FN_955-1 Single Base Substitution T-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2721-S.SNP.1:25357152 chr01:025357152 0 W/25357152-25357152 FN2721-S SNP G -> C AC=1;AN=200;BQB=0.971994;DP=5013;DP4=2453,2290,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26435e-10;MQSB=0.594856;RPB=0.917045;SGB=81.8956;VDB=0.729448;EFF=INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.1|2|1),INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.3|2|1),INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.2|2|1),INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.4|1|1),INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.6|1|1),INTRON(MODIFIER||||450|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.7|2|1),INTRON(MODIFIER||||518|LOC_Os01g44220|protein_coding|CODING|LOC_Os01g44220.5|1|1) FN-188.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN-188 Single Base Substitution C-T INTRON HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN-232.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN-232 Single Base Substitution C-T INTRON HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-265.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN-265 Single Base Substitution C-T INTRON HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1076-S.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN1076-S Single Base Substitution C-T INTRON HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN267-S.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN267-S Single Base Substitution C-T INTRON HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN772-S.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN772-S Single Base Substitution C-T INTRON HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN833-S.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN833-S Single Base Substitution C-T INTRON HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN888-S.SNP.1:25369840 chr01:025369840 0 W/25369840-25369840 FN888-S Single Base Substitution C-T INTRON HOMO SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1042-S.SNP.1:25371395 chr01:025371395 0 W/25371395-25371395 FN1042-S Single Base Substitution G-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1484-S.SNP.1:25374124 chr01:025374124 0 W/25374124-25374124 FN1484-S Single Base Substitution T-A INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2754-S.SNP.1:25376193 chr01:025376193 0 W/25376193-25376193 FN2754-S SNP T -> G AC=1;AN=200;BQB=0.931552;DP=4619;DP4=2363,2013,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71156e-09;MQSB=0.567141;RPB=0.235447;SGB=26.8797;VDB=0.0276731;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.1:25377788 chr01:025377788 0 W/25377788-25377788 FN1036-S Single Base Substitution A-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN3945-S.SNP.1:25377999 chr01:025377999 0 W/25377999-25377999 FN3945-S SNP T -> C AC=1;AN=168;BQB=0.983431;DP=2802;DP4=1354,1319,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.0083e-10;MQSB=0.902386;RPB=0.950071;SGB=4.1907;VDB=0.0425925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.1:25380269 chr01:025380269 0 W/25380269-25380269 FN2220-S SNP A -> T AC=1;AN=190;BQB=0.788866;DP=4312;DP4=2200,1855,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16025e-12;MQSB=0.0151898;RPB=0.886034;SGB=85.8548;VDB=0.442307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.1:25385238 chr01:025385238 0 W/25385238-25385238 FN1371-S Single Base Substitution T-A INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3391-S.SNP.1:25387731 chr01:025387731 0 W/25387731-25387731 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.903965;DP=3805;DP4=1789,1863,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.00374606;MQSB=0.0474542;RPB=0.793695;SGB=48.7425;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.1:25391156 chr01:025391156 0 W/25391156-25391156 FN2557-S SNP G -> T AC=1;AN=198;BQB=0.85643;DP=4196;DP4=2058,1852,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000173072;MQSB=0.965699;RPB=0.931895;SGB=11.1786;VDB=0.983198;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.1:25393050 chr01:025393050 0 W/25393050-25393050 FN587-S Single Base Substitution T-G INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3554-S.SNP.1:25393231 chr01:025393231 0 W/25393231-25393231 FN3554-S SNP C -> A AC=1;AN=188;BQB=0.797053;DP=2686;DP4=1333,1280,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18107e-08;MQSB=0.999512;RPB=0.84362;SGB=71.6954;VDB=0.302708;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.1:25395625 chr01:025395625 0 W/25395625-25395625 FN566-S Single Base Substitution G-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1048-S.SNP.1:25399183 chr01:025399183 0 W/25399183-25399183 FN1048-S Single Base Substitution G-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1048-S.SNP.1:25399184 chr01:025399184 0 W/25399184-25399184 FN1048-S Single Base Substitution G-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN-191.SNP.1:25401293 chr01:025401293 0 W/25401293-25401293 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN2780-S.SNP.1:25415968 chr01:025415968 0 W/25415968-25415968 FN2780-S SNP A -> G AC=2;AN=198;BQB=0.313323;DP=4419;DP4=2154,1635,39,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.74887e-37;MQSB=0.955148;RPB=0.709431;SGB=154.737;VDB=0.192642;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.1:25416183 chr01:025416183 0 W/25416183-25416183 FN3520-S SNP A -> C AC=1;AN=188;BQB=0.929699;DP=2665;DP4=1203,1302,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.6489e-11;MQSB=0.995099;RPB=0.869671;SGB=43.8792;VDB=0.393855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.1:25419786 chr01:025419786 0 W/25419786-25419786 FN2684-S SNP T -> C AC=1;AN=200;BQB=0.952127;DP=4990;DP4=2437,2357,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89927e-10;MQSB=0.924436;RPB=0.998776;SGB=68.0801;VDB=0.293362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K1383R|1472|LOC_Os01g44310|protein_coding|CODING|LOC_Os01g44310.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K1382R|1471|LOC_Os01g44310|protein_coding|CODING|LOC_Os01g44310.2|6|1) FN738-S.SNP.1:25420086 chr01:025420086 0 W/25420086-25420086 FN738-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN3860-S.SNP.1:25426256 chr01:025426256 0 W/25426256-25426256 FN3860-S SNP A -> G AC=1;AN=158;BQB=0.698558;DP=2465;DP4=1194,1128,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.36944e-11;MQSB=0.712898;RPB=0.528681;SGB=30.927;VDB=0.217756;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.1:25427803 chr01:025427803 0 W/25427803-25427803 FN_N1-169-1 Single Base Substitution G-A Homo LOC_Os01g44320 expressed protein SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN801-S.SNP.1:25447225 chr01:025447225 0 W/25447225-25447225 FN801-S Single Base Substitution C-T INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN801-S.SNP.1:25447226 chr01:025447226 0 W/25447226-25447226 FN801-S Single Base Substitution C-T INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN239-S.SNP.1:25447262 chr01:025447262 0 W/25447262-25447262 FN239-S Single Base Substitution A-T INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN437-S.SNP.1:25447484 chr01:025447484 0 W/25447484-25447484 FN437-S Single Base Substitution C-T INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN437-S.SNP.1:25447487 chr01:025447487 0 W/25447487-25447487 FN437-S Single Base Substitution G-A INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN437-S.SNP.1:25447489 chr01:025447489 0 W/25447489-25447489 FN437-S Single Base Substitution A-G INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN1400-S.SNP.1:25460751 chr01:025460751 0 W/25460751-25460751 FN1400-S Single Base Substitution C-A INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1400-S.SNP.1:25460758 chr01:025460758 0 W/25460758-25460758 FN1400-S Single Base Substitution G-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN4037-S.SNP.1:25464409 chr01:025464409 0 W/25464409-25464409 FN4037-S SNP A -> G AC=2;AN=168;BQB=0.970932;DP=2685;DP4=1401,1168,12,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.58407e-10;MQSB=0.839189;RPB=0.386035;SGB=62.1945;VDB=0.609934;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.1:25465418 chr01:025465418 0 W/25465418-25465418 FN3792-S SNP A -> T AC=1;AN=190;BQB=0.578943;DP=3047;DP4=1372,1583,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000328192;MQB=1.43902e-07;MQSB=0.970363;RPB=0.968775;SGB=39.6545;VDB=0.720497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.1:25469575 chr01:025469575 0 W/25469575-25469575 FN1658-S SNP G -> A AC=1;AN=188;BQB=0.719387;DP=3948;DP4=1775,2140,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.27977e-08;MQSB=0.995742;RPB=0.721026;SGB=-58.9891;VDB=0.95871;EFF=INTRON(MODIFIER||||344|LOC_Os01g44394|protein_coding|CODING|LOC_Os01g44394.1|7|1) FN-411.SNP.1:25475572 chr01:025475572 0 W/25475572-25475572 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN-233.SNP.1:25479488 chr01:025479488 0 W/25479488-25479488 FN-233 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g44430 retrotransposon protein, putative, unclassified, expressed SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1424-S.SNP.1:25479624 chr01:025479624 0 W/25479624-25479624 FN1424-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g44430 retrotransposon protein, putative, unclassified, expressed SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN-161.SNP.1:25484684 chr01:025484684 0 W/25484684-25484684 FN-161 Single Base Substitution A-G INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1284-S.SNP.1:25486696 chr01:025486696 0 W/25486696-25486696 FN1284-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN561-S.SNP.1:25493192 chr01:025493192 0 W/25493192-25493192 FN561-S Single Base Substitution T-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2649-S.SNP.1:25500539 chr01:025500539 0 W/25500539-25500539 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.938801;DP=4671;DP4=2595,1712,18,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.54641e-11;MQSB=0.444505;RPB=0.848045;SGB=50.3263;VDB=0.720775;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A143|622|LOC_Os01g44950|protein_coding|CODING|LOC_Os01g44950.1|1|1) FN3985-S.SNP.1:25501162 chr01:025501162 0 W/25501162-25501162 FN3985-S SNP C -> A AC=2;AN=168;BQB=0.813382;DP=2529;DP4=1106,1291,16,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.41051e-17;MQSB=0.77749;RPB=0.240856;SGB=167.374;VDB=0.19815;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.1:25511825 chr01:025511825 0 W/25511825-25511825 FN744-S Single Base Substitution A-G INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2232-S.SNP.1:25527885 chr01:025527885 0 W/25527885-25527885 FN2232-S SNP T -> C AC=1;AN=190;BQB=0.949142;DP=5112;DP4=2583,2223,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26851e-12;MQSB=0.915535;RPB=0.817127;SGB=117.403;VDB=0.0798732;EFF=INTRON(MODIFIER||||809|LOC_Os01g44990|protein_coding|CODING|LOC_Os01g44990.1|9|1) FN2435.SNP.1:25529806 chr01:025529806 0 W/25529806-25529806 FN2435 SNP T -> G AC=1;AN=200;BQB=0.801626;DP=4821;DP4=2430,2115,15,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.70966e-12;MQSB=0.83227;RPB=0.152819;SGB=81.8956;VDB=0.401387;EFF=INTRON(MODIFIER||||809|LOC_Os01g44990|protein_coding|CODING|LOC_Os01g44990.1|3|1) FN3903-S.SNP.1:25531572 chr01:025531572 0 W/25531572-25531572 FN3903-S SNP A -> T AC=1;AN=158;BQB=0.941831;DP=2019;DP4=603,1220,3,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.20507e-07;MQSB=0.913425;RPB=0.992961;SGB=19.0798;VDB=0.923033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.1:25532196 chr01:025532196 0 W/25532196-25532196 FN2662-S SNP T -> A AC=1;AN=200;BQB=0.363244;DP=4306;DP4=2485,1617,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61798e-08;MQSB=0.765625;RPB=0.671549;SGB=19.0642;VDB=0.502891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.1:25534455 chr01:025534455 0 W/25534455-25534455 FN1158-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN4255-S.SNP.1:25534922 chr01:025534922 0 W/25534922-25534922 FN4255-S SNP G -> C AC=1;AN=170;BQB=0.978577;DP=2056;DP4=974,952,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.15561e-09;MQSB=0.948325;RPB=0.477517;SGB=22.3266;VDB=0.596238;EFF=INTRON(MODIFIER||||307|LOC_Os01g45010|protein_coding|CODING|LOC_Os01g45010.1|1|1) FN1029-S.SNP.1:25538550 chr01:025538550 0 W/25538550-25538550 FN1029-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-52.SNP.1:25550407 chr01:025550407 0 W/25550407-25550407 FN-52 Single Base Substitution G-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN724-S.SNP.1:25551064 chr01:025551064 0 W/25551064-25551064 FN724-S Single Base Substitution C-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1228-S.SNP.1:25555339 chr01:025555339 0 W/25555339-25555339 FN1228-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g45030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1086-S.SNP.1:25557358 chr01:025557358 0 W/25557358-25557358 FN1086-S Single Base Substitution C-T INTRON HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN229-S.SNP.1:25559275 chr01:025559275 0 W/25559275-25559275 FN229-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN3666-S.SNP.1:25571549 chr01:025571549 0 W/25571549-25571549 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.881238;DP=2847;DP4=1354,1364,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0217773;MQB=0.794205;MQSB=2.76056e-43;RPB=0.371519;SGB=32.5467;VDB=0.544791;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E62|1386|LOC_Os01g45050|protein_coding|CODING|LOC_Os01g45050.1|2|1) FN2626-S.SNP.1:25572013 chr01:025572013 0 W/25572013-25572013 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.00386827;DP=5022;DP4=2105,2636,6,7;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.161689;MQB=0.569678;MQSB=0.115675;RPB=0.956896;SGB=-51.3364;VDB=0.289336;EFF=INTRON(MODIFIER||||1386|LOC_Os01g45050|protein_coding|CODING|LOC_Os01g45050.1|1|1) FN2765-S.SNP.1:25577722 chr01:025577722 0 W/25577722-25577722 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.986385;DP=3957;DP4=1915,1845,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.28304e-09;MQSB=0.960877;RPB=0.767059;SGB=37.1297;VDB=0.293058;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.1:25581159 chr01:025581159 0 W/25581159-25581159 FN742-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g45060 polygalacturonase, putative, expressed SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN_770-6-1.SNP.1:25583298 chr01:025583298 0 W/25583298-25583298 FN_770-6-1 Single Base Substitution G-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_770-6-1.SNP.1:25583299 chr01:025583299 0 W/25583299-25583299 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1644-S.SNP.1:25586215 chr01:025586215 0 W/25586215-25586215 FN1644-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os01g45070 peptide deformylase, putative, expressed SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN464-S.SNP.1:25587730 chr01:025587730 0 W/25587730-25587730 FN464-S Single Base Substitution G-A INTRON HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3437-S.SNP.1:25603220 chr01:025603220 0 W/25603220-25603220 FN3437-S SNP C -> A AC=1;AN=184;BQB=0.780952;DP=2662;DP4=1333,1241,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.07441e-06;MQSB=0.992025;RPB=0.58215;SGB=28.7043;VDB=0.284216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1622-S.SNP.1:25603361 chr01:025603361 0 W/25603361-25603361 FN1622-S Single Base Substitution C-A INTERGENIC Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN-135.SNP.1:25608110 chr01:025608110 0 W/25608110-25608110 FN-135 Single Base Substitution C-T INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN-82.SNP.1:25611489 chr01:025611489 0 W/25611489-25611489 FN-82 Single Base Substitution C-T INTERGENIC HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2751-S.SNP.1:25620978 chr01:025620978 0 W/25620978-25620978 FN2751-S SNP T -> C AC=2;AN=200;BQB=0.750704;DP=4570;DP4=2352,1968,12,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.08893e-17;MQSB=0.294538;RPB=0.922098;SGB=-3.42751;VDB=0.730475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.1:25633148 chr01:025633148 0 W/25633148-25633148 FN3855-S SNP G -> A AC=1;AN=158;BQB=0.894254;DP=3264;DP4=1236,1908,13,11;HOB=8.01154e-05;ICB=0.000161245;MQ=24;MQ0F=0.230086;MQB=0.202895;MQSB=0;RPB=0.310048;SGB=14.4112;VDB=0.768088;EFF=SPLICE_SITE_REGION(LOW||||725|LOC_Os01g45174|protein_coding|CODING|LOC_Os01g45174.1|5|1),INTRON(MODIFIER||||725|LOC_Os01g45174|protein_coding|CODING|LOC_Os01g45174.1|5|1) FN2183-S.SNP.1:25636344 chr01:025636344 0 W/25636344-25636344 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.798666;DP=4292;DP4=1932,1999,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.84641e-16;MQSB=0.000432255;RPB=0.814814;SGB=144.727;VDB=0.000160307;EFF=INTERGENIC(MODIFIER||||||||||1) FN554-S.SNP.1:25641334 chr01:025641334 0 W/25641334-25641334 FN554-S Single Base Substitution C-T INTRON HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3421-S.SNP.1:25650325 chr01:025650325 0 W/25650325-25650325 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.995935;DP=1957;DP4=1262,615,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0408789;MQB=0.139401;MQSB=0.0262991;RPB=0.0526088;SGB=48.7425;VDB=0.256065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.1:25651825 chr01:025651825 0 W/25651825-25651825 FN1443-S Single Base Substitution G-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2620-S.SNP.1:25653535 chr01:025653535 0 W/25653535-25653535 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.942841;DP=4225;DP4=1821,2235,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.141302;MQB=0.977228;MQSB=0;RPB=0.587395;SGB=72.5245;VDB=0.406816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.1:25654374 chr01:025654374 0 W/25654374-25654374 FN3479-S SNP A -> G AC=1;AN=184;BQB=0.999128;DP=3606;DP4=1852,1661,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0507488;MQB=0.0644598;MQSB=0.426174;RPB=0.963706;SGB=48.7425;VDB=0.42044;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q146R|1986|LOC_Os01g45210|protein_coding|CODING|LOC_Os01g45210.1|1|1) FN3292-S.SNP.1:25654584 chr01:025654584 0 W/25654584-25654584 FN3292-S SNP G -> A AC=2;AN=184;BQB=0.842847;DP=3798;DP4=1955,1742,18,14;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.0102686;MQB=1.24649e-13;MQSB=0.100047;RPB=0.968933;SGB=139.178;VDB=0.369566;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R216H|1986|LOC_Os01g45210|protein_coding|CODING|LOC_Os01g45210.1|1|1) FN2542-S.SNP.1:25661009 chr01:025661009 0 W/25661009-25661009 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.300396;DP=4321;DP4=2019,2095,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0143485;MQB=0.00978916;MQSB=0.196238;RPB=0.255143;SGB=49.5489;VDB=0.885039;EFF=INTRON(MODIFIER||||811|LOC_Os01g45220|protein_coding|CODING|LOC_Os01g45220.1|5|1) FN3900-S.SNP.1:25667870 chr01:025667870 0 W/25667870-25667870 FN3900-S SNP T -> C AC=1;AN=158;BQB=0.859254;DP=2380;DP4=1241,1028,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.32117e-08;MQSB=0.956659;RPB=0.568252;SGB=23.8187;VDB=0.890627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.1:25668902 chr01:025668902 0 W/25668902-25668902 FN1448-S Single Base Substitution C-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN420-S.SNP.1:25673649 chr01:025673649 0 W/25673649-25673649 FN420-S Single Base Substitution A-T INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2622-S.SNP.1:25688983 chr01:025688983 0 W/25688983-25688983 FN2622-S SNP A -> G AC=1;AN=200;BQB=0.912829;DP=4994;DP4=2579,2274,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09318e-11;MQSB=0.456672;RPB=0.861211;SGB=77.2904;VDB=0.729744;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.1:25689096 chr01:025689096 0 W/25689096-25689096 FN1335-S Single Base Substitution G-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2708-S.SNP.1:25691992 chr01:025691992 0 W/25691992-25691992 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.0403785;DP=4981;DP4=2708,2075,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84969e-13;MQSB=0.949108;RPB=0.940825;SGB=-8.26887;VDB=0.243751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.1:25692914 chr01:025692914 0 W/25692914-25692914 FN1448-S Single Base Substitution C-A INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN700-S.SNP.1:25703880 chr01:025703880 0 W/25703880-25703880 FN700-S Single Base Substitution G-A INTRON HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN691-S.SNP.1:25709771 chr01:025709771 0 W/25709771-25709771 FN691-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN367-S.SNP.1:25721608 chr01:025721608 0 W/25721608-25721608 FN367-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN1150-S.SNP.1:25727478 chr01:025727478 0 W/25727478-25727478 FN1150-S Single Base Substitution G-C INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2754-S.SNP.1:25729301 chr01:025729301 0 W/25729301-25729301 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.630616;DP=5238;DP4=2721,2257,7,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0127911;MQB=1.26164e-06;MQSB=0.000979632;RPB=0.480521;SGB=3.06925;VDB=0.917907;EFF=INTRON(MODIFIER||||1562|LOC_Os01g45330|protein_coding|CODING|LOC_Os01g45330.1|5|1) FN1468-S.SNP.1:25732281 chr01:025732281 0 W/25732281-25732281 FN1468-S Single Base Substitution G-A STOP_GAINED HET LOC_Os01g45330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN3440-S.SNP.1:25732310 chr01:025732310 0 W/25732310-25732310 FN3440-S SNP C -> G AC=1;AN=184;BQB=0.999993;DP=3537;DP4=2038,1419,17,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0234662;MQB=0.00121677;MQSB=0.834744;RPB=0.581928;SGB=98.4821;VDB=0.218829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R667P|1562|LOC_Os01g45330|protein_coding|CODING|LOC_Os01g45330.1|3|1) FN_815-4-1.SNP.1:25732946 chr01:025732946 0 W/25732946-25732946 FN_815-4-1 Single Base Substitution C-T Homo LOC_Os01g45330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3509-S.SNP.1:25735569 chr01:025735569 0 W/25735569-25735569 FN3509-S SNP A -> G AC=1;AN=188;BQB=0.999834;DP=3401;DP4=1949,1343,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.406057;MQB=0.08791;MQSB=0;RPB=0.932929;SGB=39.5276;VDB=0.934783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.1:25737710 chr01:025737710 0 W/25737710-25737710 FN1022-S Single Base Substitution C-T INTERGENIC HOMO SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2418.SNP.1:25738430 chr01:025738430 0 W/25738430-25738430 FN2418 SNP C -> T AC=1;AN=200;BQB=0.724492;DP=3169;DP4=1152,1598,4,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000315557;MQB=1.3447e-05;MQSB=0.584221;RPB=0.873001;SGB=40.4492;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.1:25740756 chr01:025740756 0 W/25740756-25740756 FN1745-S SNP C -> T AC=1;AN=188;BQB=0.999879;DP=3007;DP4=1577,1393,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.18467e-08;MQSB=0.988101;RPB=0.250454;SGB=26.0762;VDB=0.446847;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.1:25741733 chr01:025741733 0 W/25741733-25741733 FN997-S Single Base Substitution G-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3630-S.SNP.1:25744368 chr01:025744368 0 W/25744368-25744368 FN3630-S SNP T -> A AC=1;AN=190;BQB=0.940731;DP=2672;DP4=968,1276,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=4.82859e-06;MQSB=0.249925;RPB=0.864065;SGB=36.1006;VDB=0.170695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.1:25745258 chr01:025745258 0 W/25745258-25745258 FN1025-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g45350 exostosin family protein, putative, expressed SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3446-S.SNP.1:25752255 chr01:025752255 0 W/25752255-25752255 FN3446-S SNP G -> C AC=1;AN=184;BQB=0.952939;DP=2761;DP4=1310,1357,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28125e-05;MQSB=0.964129;RPB=0.965968;SGB=39.699;VDB=0.814818;EFF=UTR_3_PRIME(MODIFIER||287||405|LOC_Os01g45370|protein_coding|CODING|LOC_Os01g45370.1|8|1) FN1536-S.SNP.1:25753487 chr01:025753487 0 W/25753487-25753487 FN1536-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g45370 radical SAM enzyme, putative, expressed SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN467-S.SNP.1:25756332 chr01:025756332 0 W/25756332-25756332 FN467-S Single Base Substitution G-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN4110-S.SNP.1:25765555 chr01:025765555 0 W/25765555-25765555 FN4110-S SNP C -> T AC=2;AN=182;BQB=0.938753;DP=2827;DP4=1525,1205,19,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.44512e-21;MQSB=0.932909;RPB=0.515769;SGB=116.377;VDB=0.708014;EFF=INTRON(MODIFIER||||265|LOC_Os01g45390|protein_coding|CODING|LOC_Os01g45390.2|6|1) FN1154-S.SNP.1:25785624 chr01:025785624 0 W/25785624-25785624 FN1154-S Single Base Substitution C-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN-265.SNP.1:25792027 chr01:025792027 0 W/25792027-25792027 FN-265 Single Base Substitution G-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2664-S.SNP.1:25794233 chr01:025794233 0 W/25794233-25794233 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.90356;DP=4718;DP4=2010,2437,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.41764e-10;MQSB=0.110804;RPB=0.644648;SGB=68.0801;VDB=0.197212;EFF=INTRON(MODIFIER||||338|LOC_Os01g45460|protein_coding|CODING|LOC_Os01g45460.1|1|1) FN1554-S.SNP.1:25803339 chr01:025803339 0 W/25803339-25803339 FN1554-S Single Base Substitution G-A INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3696-S.SNP.1:25808304 chr01:025808304 0 W/25808304-25808304 FN3696-S SNP C -> T AC=1;AN=190;BQB=0.961447;DP=2863;DP4=1464,1325,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0583304;MQB=0.160075;MQSB=0.00541423;RPB=0.896496;SGB=39.6545;VDB=0.312146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1169M|1475|LOC_Os01g45490|protein_coding|CODING|LOC_Os01g45490.1|1|1) FN2417.SNP.1:25821298 chr01:025821298 0 W/25821298-25821298 FN2417 SNP G -> A AC=1;AN=200;BQB=0.417377;DP=4778;DP4=2405,2014,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.09576e-12;MQSB=0.843037;RPB=0.584632;SGB=-11.2947;VDB=0.482412;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.1:25821813 chr01:025821813 0 W/25821813-25821813 FN450-S Single Base Substitution T-G INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN697-S.SNP.1:25830907 chr01:025830907 0 W/25830907-25830907 FN697-S Single Base Substitution A-C INTERGENIC HOMO SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN-309.SNP.1:25833569 chr01:025833569 0 W/25833569-25833569 FN-309 Single Base Substitution C-A INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN475-S.SNP.1:25835109 chr01:025835109 0 W/25835109-25835109 FN475-S Single Base Substitution G-A INTERGENIC HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2424.SNP.1:25838479 chr01:025838479 0 W/25838479-25838479 FN2424 SNP G -> C AC=1;AN=200;BQB=0.99931;DP=4602;DP4=2347,2050,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.51769e-12;MQSB=0.942555;RPB=0.284626;SGB=34.6953;VDB=0.0354484;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A293P|743|LOC_Os01g45520|protein_coding|CODING|LOC_Os01g45520.1|2|1) FN770-S.SNP.1:25839620 chr01:025839620 0 W/25839620-25839620 FN770-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN770-S.SNP.1:25839636 chr01:025839636 0 W/25839636-25839636 FN770-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os01g45520 D-mannose binding lectin family protein, expressed SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN-332.SNP.1:25842124 chr01:025842124 0 W/25842124-25842124 FN-332 Single Base Substitution A-G INTRON HOMO SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1117-S.SNP.1:25844711 chr01:025844711 0 W/25844711-25844711 FN1117-S Single Base Substitution G-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN441-S.SNP.1:25845369 chr01:025845369 0 W/25845369-25845369 FN441-S Single Base Substitution A-G INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3807-S.SNP.1:25846249 chr01:025846249 0 W/25846249-25846249 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.974365;DP=3441;DP4=1911,1404,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.21872e-10;MQSB=0.690676;RPB=0.961846;SGB=80.9724;VDB=0.169011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.1:25847412 chr01:025847412 0 W/25847412-25847412 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.401292;DP=3663;DP4=1912,1550,51,133;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.003549;MQB=0;MQSB=0.13907;RPB=2.27884e-34;SGB=-2691.29;VDB=1.97105e-21;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:25848513 chr01:025848513 0 W/25848513-25848513 FN788-S Single Base Substitution C-T INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN4230-S.SNP.1:25852829 chr01:025852829 0 W/25852829-25852829 FN4230-S SNP G -> T AC=1;AN=170;BQB=0.763316;DP=2366;DP4=1115,1197,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16932e-05;MQSB=0.935438;RPB=0.238511;SGB=47.8722;VDB=0.317885;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.1:25853611 chr01:025853611 0 W/25853611-25853611 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.000490519;DP=3590;DP4=1719,1843,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000217634;MQSB=0.998802;RPB=0.910629;SGB=-36.659;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.1:25857218 chr01:025857218 0 W/25857218-25857218 FN1195-S Single Base Substitution A-G INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2139-S.SNP.1:25857248 chr01:025857248 0 W/25857248-25857248 FN2139-S SNP T -> A AC=2;AN=168;BQB=0.351533;DP=2984;DP4=1142,1775,20,28;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00871314;MQB=4.21986e-07;MQSB=5.64333e-07;RPB=0.746587;SGB=-159.723;VDB=0.576875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.1:25857315 chr01:025857315 0 W/25857315-25857315 FN1618-S Single Base Substitution C-A INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3306-S.SNP.1:25858823 chr01:025858823 0 W/25858823-25858823 FN3306-S SNP C -> A AC=1;AN=184;BQB=0.261258;DP=3560;DP4=1456,1967,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000280899;MQB=8.93749e-06;MQSB=0.790666;RPB=0.859164;SGB=38.4058;VDB=0.858112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.1:25859634 chr01:025859634 0 W/25859634-25859634 FN2541-S SNP G -> A AC=1;AN=198;BQB=0.817685;DP=3440;DP4=1637,1579,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.2622e-10;MQSB=0.580706;RPB=0.489446;SGB=90.9049;VDB=0.928667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A167T|170|LOC_Os01g45540|protein_coding|CODING|LOC_Os01g45540.1|1|1) FN1154-S.SNP.1:25863770 chr01:025863770 0 W/25863770-25863770 FN1154-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1154-S.SNP.1:25863771 chr01:025863771 0 W/25863771-25863771 FN1154-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN818-S.SNP.1:25883862 chr01:025883862 0 W/25883862-25883862 FN818-S Single Base Substitution G-A INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN-118.SNP.1:25886912 chr01:025886912 0 W/25886912-25886912 FN-118 Single Base Substitution T-A INTERGENIC HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. W500-4-7-1.SNP.1:25887181 chr01:025887181 0 W/25887181-25887181 W500-4-7-1 Single Base Substitution C-T INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN654-S.SNP.1:25899271 chr01:025899271 0 W/25899271-25899271 FN654-S Single Base Substitution A-G INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-140.SNP.1:25901495 chr01:025901495 0 W/25901495-25901495 FN-140 Single Base Substitution T-A INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3826-S.SNP.1:25912008 chr01:025912008 0 W/25912008-25912008 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.898357;DP=2564;DP4=1349,1107,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.187207;MQB=0.55341;MQSB=0;RPB=0.553184;SGB=58.2031;VDB=0.760546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.1:25912839 chr01:025912839 0 W/25912839-25912839 FN2322 SNP G -> A AC=1;AN=192;BQB=0.448211;DP=4865;DP4=2339,2249,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.152107;MQB=0.826288;MQSB=0;RPB=0.832282;SGB=18.6565;VDB=0.160695;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.1:25913578 chr01:025913578 0 W/25913578-25913578 FN939-S Single Base Substitution G-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2774-S.SNP.1:25919915 chr01:025919915 0 W/25919915-25919915 FN2774-S SNP T -> C AC=2;AN=198;BQB=0.940417;DP=4220;DP4=2232,1747,28,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.97847e-26;MQSB=0.999905;RPB=0.142782;SGB=219.568;VDB=0.996712;EFF=INTRON(MODIFIER||||501|LOC_Os01g45620|protein_coding|CODING|LOC_Os01g45620.1|5|1) FN2676-S.SNP.1:25928313 chr01:025928313 0 W/25928313-25928313 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.979713;DP=4942;DP4=2174,2439,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28057e-10;MQSB=0.713394;RPB=0.966875;SGB=63.4749;VDB=0.54753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.1:25930475 chr01:025930475 0 W/25930475-25930475 FN3928-S SNP G -> C AC=1;AN=158;BQB=0.905037;DP=2523;DP4=1157,1119,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.78649e-07;MQSB=0.999287;RPB=0.597013;SGB=51.4366;VDB=0.720447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.1:25930480 chr01:025930480 0 W/25930480-25930480 FN3667-S SNP T -> A AC=1;AN=190;BQB=0.34258;DP=2910;DP4=1332,1289,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000444547;MQSB=0.942695;RPB=0.931989;SGB=-2.10437;VDB=0.990151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.1:25933684 chr01:025933684 0 W/25933684-25933684 FN1192-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1297-S.SNP.1:25937524 chr01:025937524 0 W/25937524-25937524 FN1297-S Single Base Substitution A-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2701-S.SNP.1:25950263 chr01:025950263 0 W/25950263-25950263 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.850992;DP=4693;DP4=2007,2282,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.47514e-19;MQSB=0.999309;RPB=0.905054;SGB=141.763;VDB=0.298938;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.1:25954459 chr01:025954459 0 W/25954459-25954459 FN-236 Single Base Substitution T-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-115.SNP.1:25964439 chr01:025964439 0 W/25964439-25964439 FN-115 Single Base Substitution G-A INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1485-S.SNP.1:25964693 chr01:025964693 0 W/25964693-25964693 FN1485-S Single Base Substitution T-A INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2756-S.SNP.1:25988202 chr01:025988202 0 W/25988202-25988202 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.925146;DP=4940;DP4=2267,2434,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.5404e-15;MQSB=0.924396;RPB=0.678214;SGB=50.3263;VDB=0.588837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.1:25992713 chr01:025992713 0 W/25992713-25992713 FN1721-S SNP C -> T AC=2;AN=188;BQB=0.505191;DP=3698;DP4=1941,1696,25,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.61605e-22;MQSB=0.995585;RPB=0.255485;SGB=-155.228;VDB=0.802976;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.1:25995747 chr01:025995747 0 W/25995747-25995747 FN4260-S SNP T -> A AC=1;AN=170;BQB=0.763933;DP=2276;DP4=1275,894,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.86382e-10;MQSB=0.993854;RPB=0.716088;SGB=52.0913;VDB=0.985161;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L214Q|406|LOC_Os01g45760|protein_coding|CODING|LOC_Os01g45760.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L214Q|364|LOC_Os01g45760|protein_coding|CODING|LOC_Os01g45760.2|2|1) FN2089-S.SNP.1:25996937 chr01:025996937 0 W/25996937-25996937 FN2089-S SNP T -> C AC=2;AN=168;BQB=0.000135545;DP=3839;DP4=1972,1802,20,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.58943e-14;MQSB=0.905272;RPB=0.191195;SGB=-305.859;VDB=0.572572;EFF=UTR_3_PRIME(MODIFIER||478||364|LOC_Os01g45760|protein_coding|CODING|LOC_Os01g45760.2|3|1),UTR_3_PRIME(MODIFIER||181||406|LOC_Os01g45760|protein_coding|CODING|LOC_Os01g45760.1|4|1) FN-107.SNP.1:25999769 chr01:025999769 0 W/25999769-25999769 FN-107 Single Base Substitution T-C INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3715-S.SNP.1:26013917 chr01:026013917 0 W/26013917-26013917 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.821234;DP=2778;DP4=1382,1187,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.0996e-09;MQSB=0.410911;RPB=0.999123;SGB=-12.6681;VDB=0.62687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.1:26014597 chr01:026014597 0 W/26014597-26014597 FN3574-S SNP T -> C AC=1;AN=188;BQB=0.68992;DP=2226;DP4=1007,1098,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000204242;MQSB=0.325571;RPB=0.688702;SGB=35.9843;VDB=0.628815;EFF=INTERGENIC(MODIFIER||||||||||1) FN-10.SNP.1:26016587 chr01:026016587 0 W/26016587-26016587 FN-10 Single Base Substitution G-A INTERGENIC Homo SNo: 10, Mutant_ID: FN-10, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2691-S.SNP.1:26018832 chr01:026018832 0 W/26018832-26018832 FN2691-S SNP G -> C AC=1;AN=200;BQB=0.802806;DP=5296;DP4=2230,2775,17,9;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0336103;MQB=3.40816e-05;MQSB=1.45748e-06;RPB=0.695076;SGB=114.132;VDB=0.711893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E632D|1041|LOC_Os01g45800|protein_coding|CODING|LOC_Os01g45800.1|2|1) FN-328.SNP.1:26022874 chr01:026022874 0 W/26022874-26022874 FN-328 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g45810 transposon protein, putative, unclassified, expressed SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3850-S.SNP.1:26023680 chr01:026023680 0 W/26023680-26023680 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.874566;DP=3914;DP4=2086,1717,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.244507;MQB=0.0492409;MQSB=0;RPB=0.941879;SGB=21.4493;VDB=0.885662;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1034Q|2027|LOC_Os01g45810|protein_coding|CODING|LOC_Os01g45810.1|2|1) FN2670-S.SNP.1:26026675 chr01:026026675 0 W/26026675-26026675 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.918652;DP=4620;DP4=2191,2149,21,19;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0136364;MQB=1.01377e-17;MQSB=0.00350517;RPB=0.735878;SGB=134.004;VDB=0.212228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G60R|2027|LOC_Os01g45810|protein_coding|CODING|LOC_Os01g45810.1|1|1) FN3777-S.SNP.1:26035782 chr01:026035782 0 W/26035782-26035782 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.816518;DP=2965;DP4=1421,1442,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000337268;MQB=1.84479e-07;MQSB=0.998883;RPB=0.990671;SGB=18.552;VDB=0.580208;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.1:26036589 chr01:026036589 0 W/26036589-26036589 FN_789-2-1 Single Base Substitution G-A Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2472.SNP.1:26043181 chr01:026043181 0 W/26043181-26043181 FN2472 SNP C -> T AC=1;AN=200;BQB=0.999724;DP=3247;DP4=1141,1698,7,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000307977;MQB=2.65643e-08;MQSB=0.121609;RPB=0.501366;SGB=32.0901;VDB=0.135926;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G36|151|LOC_Os01g45850|protein_coding|CODING|LOC_Os01g45850.1|1|1) FN914-S.SNP.1:26045957 chr01:026045957 0 W/26045957-26045957 FN914-S Single Base Substitution C-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2260-S.SNP.1:26049036 chr01:026049036 0 W/26049036-26049036 FN2260-S SNP T -> A AC=1;AN=190;BQB=0.387917;DP=4120;DP4=1909,1926,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000242718;MQB=9.91318e-15;MQSB=0.17281;RPB=0.770907;SGB=67.0756;VDB=0.208527;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.1:26049036 chr01:026049036 0 W/26049036-26049036 W598-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN_935-1.SNP.1:26052799 chr01:026052799 0 W/26052799-26052799 FN_935-1 Single Base Substitution T-C Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN2662-S.SNP.1:26069642 chr01:026069642 0 W/26069642-26069642 FN2662-S SNP T -> A AC=1;AN=200;BQB=0.400035;DP=4670;DP4=2517,1819,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.93213e-14;MQSB=0.644319;RPB=0.892271;SGB=-6.45336;VDB=0.0528233;EFF=INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.1|3|1),INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.2|3|1) FN2662-S.SNP.1:26069643 chr01:026069643 0 W/26069643-26069643 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.374924;DP=4680;DP4=2513,1905,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12691e-15;MQSB=0.653656;RPB=0.731763;SGB=58.1418;VDB=0.164881;EFF=INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.1|3|1),INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.2|3|1) FN2662-S.SNP.1:26069645 chr01:026069645 0 W/26069645-26069645 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.973755;DP=4684;DP4=2501,1938,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72044e-16;MQSB=0.783165;RPB=0.996579;SGB=55.5366;VDB=0.147451;EFF=INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.1|3|1),INTRON(MODIFIER||||1304|LOC_Os01g45880|protein_coding|CODING|LOC_Os01g45880.2|3|1) FN-222.SNP.1:26082720 chr01:026082720 0 W/26082720-26082720 FN-222 Single Base Substitution A-T INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2098-S.SNP.1:26090088 chr01:026090088 0 W/26090088-26090088 FN2098-S SNP G -> A AC=2;AN=168;BQB=0.604642;DP=1930;DP4=766,1086,13,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.42218e-14;MQSB=0.998695;RPB=0.292935;SGB=76.5949;VDB=0.282753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L10F|112|LOC_Os01g45920|protein_coding|CODING|LOC_Os01g45920.1|1|1) FN3383-S.SNP.1:26091005 chr01:026091005 0 W/26091005-26091005 FN3383-S SNP G -> C AC=2;AN=184;BQB=0.993731;DP=2241;DP4=826,1323,18,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.93563e-22;MQSB=0.279249;RPB=0.858668;SGB=165.41;VDB=0.889019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-109.SNP.1:26092251 chr01:026092251 0 W/26092251-26092251 FN-109 Single Base Substitution G-A INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN2190-S.SNP.1:26106907 chr01:026106907 0 W/26106907-26106907 FN2190-S SNP C -> T AC=2;AN=190;BQB=0.291468;DP=4264;DP4=1745,2304,17,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.97775e-21;MQSB=0.04709;RPB=0.239467;SGB=156.932;VDB=0.607276;EFF=UTR_5_PRIME(MODIFIER||262||650|LOC_Os01g45960|protein_coding|CODING|LOC_Os01g45960.1|1|1),UTR_5_PRIME(MODIFIER||262||630|LOC_Os01g45960|protein_coding|CODING|LOC_Os01g45960.2|1|1) FN1692-S.SNP.1:26113390 chr01:026113390 0 W/26113390-26113390 FN1692-S SNP A -> T AC=2;AN=188;BQB=0.625502;DP=3561;DP4=1710,1805,14,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.0634e-14;MQSB=0.326784;RPB=0.414346;SGB=-7.39363;VDB=0.520201;EFF=INTRON(MODIFIER||||117|LOC_Os01g45970|protein_coding|CODING|LOC_Os01g45970.1|1|1) FN-238.SNP.1:26113897 chr01:026113897 0 W/26113897-26113897 FN-238 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1465-S.SNP.1:26118141 chr01:026118141 0 W/26118141-26118141 FN1465-S Single Base Substitution A-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3942-S.SNP.1:26120293 chr01:026120293 0 W/26120293-26120293 FN3942-S SNP G -> A AC=1;AN=168;BQB=0.686039;DP=2670;DP4=1284,1292,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.79796e-07;MQSB=0.936265;RPB=0.897798;SGB=22.1847;VDB=0.601779;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A856|935|LOC_Os01g45990|protein_coding|CODING|LOC_Os01g45990.1|11|1) FN2210-S.SNP.1:26135687 chr01:026135687 0 W/26135687-26135687 FN2210-S SNP T -> G AC=2;AN=190;BQB=0.632686;DP=2359;DP4=705,1014,11,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000847817;MQB=3.95579e-08;MQSB=0.152163;RPB=0.733069;SGB=-203.847;VDB=0.274135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.1:26135947 chr01:026135947 0 W/26135947-26135947 FN2318 SNP C -> A AC=1;AN=192;BQB=0.367141;DP=4708;DP4=2280,2059,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.02151e-08;MQSB=0.966985;RPB=0.755591;SGB=51.9931;VDB=0.637605;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.1:26145566 chr01:026145566 0 W/26145566-26145566 FN969-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g46000 retrotransposon protein, putative, unclassified, expressed SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2269-S.SNP.1:26153959 chr01:026153959 0 W/26153959-26153959 FN2269-S SNP A -> G AC=1;AN=190;BQB=0.964127;DP=5287;DP4=2392,2668,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.09209e-06;MQSB=0.770916;RPB=0.345205;SGB=32.5467;VDB=0.137841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.1:26156834 chr01:026156834 0 W/26156834-26156834 FN3740-S SNP C -> G AC=2;AN=190;BQB=0.385166;DP=2685;DP4=1370,1209,7,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.25654e-09;MQSB=0.493307;RPB=0.26862;SGB=44.0907;VDB=0.263133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.1:26161283 chr01:026161283 0 W/26161283-26161283 FN1533-S Single Base Substitution G-A INTERGENIC Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN727-S.SNP.1:26164279 chr01:026164279 0 W/26164279-26164279 FN727-S Single Base Substitution T-C INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN4093-S.SNP.1:26167214 chr01:026167214 0 W/26167214-26167214 FN4093-S SNP C -> A AC=1;AN=182;BQB=0.925267;DP=2638;DP4=1403,1141,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.80653e-07;MQSB=0.995997;RPB=0.830164;SGB=35.6277;VDB=0.172156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:26173327 chr01:026173327 0 W/26173327-26173327 FN2096-S SNP C -> G AC=1;AN=168;BQB=0.691539;DP=3829;DP4=2037,1736,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.61291e-11;MQSB=0.999641;RPB=0.906637;SGB=-108.339;VDB=0.480457;EFF=UTR_3_PRIME(MODIFIER||255||238|LOC_Os01g46040|protein_coding|CODING|LOC_Os01g46040.1|2|1) FN2653-S.SNP.1:26186533 chr01:026186533 0 W/26186533-26186533 FN2653-S SNP C -> G AC=2;AN=200;BQB=0.983799;DP=4591;DP4=2196,2124,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81284e-26;MQSB=0.999588;RPB=0.974215;SGB=94.6142;VDB=0.216645;EFF=INTRON(MODIFIER||||607|LOC_Os01g46060|protein_coding|CODING|LOC_Os01g46060.1|5|1) FN2473.SNP.1:26193267 chr01:026193267 0 W/26193267-26193267 FN2473 SNP T -> A AC=2;AN=200;BQB=0.312149;DP=4668;DP4=2115,2241,18,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46679e-14;MQSB=0.293287;RPB=0.760349;SGB=83.5316;VDB=0.938587;EFF=INTRON(MODIFIER||||340|LOC_Os01g46070|protein_coding|CODING|LOC_Os01g46070.1|6|1) FN2473.SNP.1:26193268 chr01:026193268 0 W/26193268-26193268 FN2473 SNP C -> T AC=2;AN=200;BQB=0.120319;DP=4673;DP4=2148,2265,17,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27298e-13;MQSB=0.235877;RPB=0.616959;SGB=79.9264;VDB=0.958564;EFF=INTRON(MODIFIER||||340|LOC_Os01g46070|protein_coding|CODING|LOC_Os01g46070.1|6|1) FN759-S.SNP.1:26201060 chr01:026201060 0 W/26201060-26201060 FN759-S Single Base Substitution C-G STOP_GAINED HET LOC_Os01g46080 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2630-S.SNP.1:26203968 chr01:026203968 0 W/26203968-26203968 FN2630-S SNP C -> A AC=1;AN=200;BQB=0.291789;DP=4406;DP4=1890,1984,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00113482;MQB=2.51655e-10;MQSB=0.693952;RPB=0.789003;SGB=61.9006;VDB=0.715444;EFF=INTRON(MODIFIER||||310|LOC_Os01g46090|protein_coding|CODING|LOC_Os01g46090.1|1|1) FN2620-S.SNP.1:26217511 chr01:026217511 0 W/26217511-26217511 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.500713;DP=3282;DP4=1984,1118,18,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28684e-15;MQSB=0.640975;RPB=0.27926;SGB=118.476;VDB=0.356212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R163K|1282|LOC_Os01g46110|protein_coding|CODING|LOC_Os01g46110.1|2|1) FN2166-S.SNP.1:26224609 chr01:026224609 0 W/26224609-26224609 FN2166-S SNP A -> G AC=1;AN=168;BQB=0.178021;DP=4099;DP4=1980,2077,17,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58897e-11;MQSB=0.908759;RPB=0.747832;SGB=-82.1908;VDB=0.78202;EFF=INTRON(MODIFIER||||292|LOC_Os01g46120|protein_coding|CODING|LOC_Os01g46120.3|3|1),INTRON(MODIFIER||||400|LOC_Os01g46120|protein_coding|CODING|LOC_Os01g46120.1|4|1),INTRON(MODIFIER||||307|LOC_Os01g46120|protein_coding|CODING|LOC_Os01g46120.2|3|1) FN2387.SNP.1:26227059 chr01:026227059 0 W/26227059-26227059 FN2387 SNP C -> T AC=1;AN=192;BQB=0.028445;DP=4701;DP4=2193,2112,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00914699;MQB=0.0578853;MQSB=0.0265749;RPB=0.57633;SGB=-35.3278;VDB=0.432556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.1:26227797 chr01:026227797 0 W/26227797-26227797 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.445449;DP=4732;DP4=2227,2129,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000211327;MQB=2.25321e-05;MQSB=0.972616;RPB=0.917703;SGB=33.0593;VDB=0.686666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.1:26233179 chr01:026233179 0 W/26233179-26233179 FN2292 SNP T -> G AC=2;AN=192;BQB=0.963967;DP=4812;DP4=2435,2059,18,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.50194e-25;MQSB=0.681652;RPB=0.201588;SGB=-47.5261;VDB=0.77494;EFF=INTRON(MODIFIER||||146|LOC_Os01g46130|protein_coding|CODING|LOC_Os01g46130.2|3|1) FN1704-S.SNP.1:26237448 chr01:026237448 0 W/26237448-26237448 FN1704-S SNP C -> A AC=1;AN=188;BQB=0.31478;DP=3847;DP4=1803,2017,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.86242e-07;MQSB=0.999266;RPB=0.902586;SGB=-88.8972;VDB=0.0152441;EFF=INTRON(MODIFIER||||137|LOC_Os01g46140|protein_coding|CODING|LOC_Os01g46140.1|1|1) FN1617-S.SNP.1:26244124 chr01:026244124 0 W/26244124-26244124 FN1617-S Single Base Substitution A-T INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2342.SNP.1:26247246 chr01:026247246 0 W/26247246-26247246 FN2342 SNP G -> A AC=1;AN=192;BQB=0.999223;DP=5107;DP4=2679,2089,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.10439e-12;MQSB=0.999837;RPB=0.824379;SGB=57.6018;VDB=0.0570914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.1:26252860 chr01:026252860 0 W/26252860-26252860 FN1650-S Single Base Substitution T-C INTRON HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3818-S.SNP.1:26252931 chr01:026252931 0 W/26252931-26252931 FN3818-S SNP G -> A AC=2;AN=190;BQB=0.999588;DP=2495;DP4=1246,1160,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.6055e-14;MQSB=0.999944;RPB=0.960941;SGB=68.0854;VDB=0.822472;EFF=INTRON(MODIFIER||||295|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.1|2|1),INTRON(MODIFIER||||260|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.2|2|1),INTRON(MODIFIER||||222|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.3|2|1) FN1720-S.SNP.1:26257683 chr01:026257683 0 W/26257683-26257683 FN1720-S SNP G -> T AC=2;AN=188;BQB=0.610262;DP=2285;DP4=1141,1112,8,11;HOB=0.0210502;ICB=0.494738;MQ=27;MQ0F=0.161926;MQB=0.920768;MQSB=0;RPB=0.963409;SGB=33.7061;VDB=0.0837159;EFF=INTRON(MODIFIER||||295|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.1|2|1),INTRON(MODIFIER||||260|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.2|2|1),INTRON(MODIFIER||||222|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.3|2|1) FN3970-S.SNP.1:26259834 chr01:026259834 0 W/26259834-26259834 FN3970-S SNP G -> A AC=2;AN=168;BQB=0.704176;DP=1912;DP4=818,991,15,10;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.04341;MQB=0.0844735;MQSB=0.894767;RPB=0.632177;SGB=75.9177;VDB=0.823107;EFF=INTRON(MODIFIER||||295|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.1|2|1),INTRON(MODIFIER||||260|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.2|2|1),INTRON(MODIFIER||||222|LOC_Os01g46169|protein_coding|CODING|LOC_Os01g46169.3|2|1) FN1730-S.SNP.1:26274235 chr01:026274235 0 W/26274235-26274235 FN1730-S SNP T -> C AC=1;AN=188;BQB=0.518534;DP=2893;DP4=665,2187,6,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.93277e-13;MQSB=0.845796;RPB=0.848986;SGB=-40.1048;VDB=0.603993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.1:26279004 chr01:026279004 0 W/26279004-26279004 FN2199-S SNP T -> G AC=1;AN=190;BQB=0.196695;DP=5112;DP4=2707,2034,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53373e-07;MQSB=0.209819;RPB=0.608225;SGB=57.4238;VDB=0.532962;EFF=INTRON(MODIFIER||||314|LOC_Os01g46200|protein_coding|CODING|LOC_Os01g46200.1|6|1),INTRON(MODIFIER||||314|LOC_Os01g46200|protein_coding|CODING|LOC_Os01g46200.2|6|1),INTRON(MODIFIER||||314|LOC_Os01g46200|protein_coding|CODING|LOC_Os01g46200.3|6|1) FN4121-S.SNP.1:26294570 chr01:026294570 0 W/26294570-26294570 FN4121-S SNP C -> T AC=2;AN=182;BQB=0.571136;DP=3470;DP4=1601,1774,8,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.62153e-12;MQSB=0.998431;RPB=0.524821;SGB=70.7363;VDB=0.124369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R456C|598|LOC_Os01g46230|protein_coding|CODING|LOC_Os01g46230.1|1|1) FN2379.SNP.1:26295202 chr01:026295202 0 W/26295202-26295202 FN2379 SNP A -> G AC=1;AN=192;BQB=0.0576396;DP=5088;DP4=2633,2222,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.84511e-09;MQSB=0.486077;RPB=0.419634;SGB=58.3392;VDB=0.90974;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.1:26301418 chr01:026301418 0 W/26301418-26301418 FN564-S Single Base Substitution C-A INTRON HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2278-S.SNP.1:26304454 chr01:026304454 0 W/26304454-26304454 FN2278-S SNP A -> G AC=1;AN=190;BQB=0.828668;DP=5115;DP4=2267,2472,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33454e-19;MQSB=0.787299;RPB=0.748751;SGB=103.624;VDB=0.203119;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.1:26305038 chr01:026305038 0 W/26305038-26305038 FN4204-S SNP T -> C AC=1;AN=170;BQB=0.989226;DP=2018;DP4=983,895,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.30726e-07;MQSB=0.869919;RPB=0.926965;SGB=-18.3175;VDB=0.370764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.1:26322814 chr01:026322814 0 W/26322814-26322814 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.113464;DP=4891;DP4=2010,2583,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.31566e-09;MQSB=0.963468;RPB=0.156609;SGB=-35.3156;VDB=0.029048;EFF=INTRON(MODIFIER||||420|LOC_Os01g46290|protein_coding|CODING|LOC_Os01g46290.1|1|1) FN2216-S.SNP.1:26325335 chr01:026325335 0 W/26325335-26325335 FN2216-S SNP T -> C AC=1;AN=190;BQB=0.468925;DP=5688;DP4=2900,2486,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000175809;MQB=4.17446e-18;MQSB=0.992336;RPB=0.609226;SGB=-6.02158;VDB=0.167468;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.1:26325855 chr01:026325855 0 W/26325855-26325855 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. W591-4-1.SNP.1:26328245 chr01:026328245 0 W/26328245-26328245 W591-4-1 Single Base Substitution T-C INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN711-S.SNP.1:26328581 chr01:026328581 0 W/26328581-26328581 FN711-S Single Base Substitution G-A INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN791-S.SNP.1:26328581 chr01:026328581 0 W/26328581-26328581 FN791-S Single Base Substitution G-A INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2097-S.SNP.1:26332658 chr01:026332658 0 W/26332658-26332658 FN2097-S SNP T -> C AC=1;AN=168;BQB=0.0150225;DP=3867;DP4=2086,1739,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00155159;MQB=1.51216e-09;MQSB=0.223963;RPB=0.232978;SGB=-177.758;VDB=0.329814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.1:26336723 chr01:026336723 0 W/26336723-26336723 FN1570-S Single Base Substitution C-T INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2309.SNP.1:26341942 chr01:026341942 0 W/26341942-26341942 FN2309 SNP A -> T AC=1;AN=192;BQB=0.991426;DP=4776;DP4=2524,2014,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.68043e-11;MQSB=0.729335;RPB=0.86659;SGB=-13.0756;VDB=0.0763162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.1:26346272 chr01:026346272 0 W/26346272-26346272 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3416-S.SNP.1:26353142 chr01:026353142 0 W/26353142-26353142 FN3416-S SNP G -> T AC=1;AN=184;BQB=0.951706;DP=1510;DP4=943,353,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.102649;MQB=0.348019;MQSB=0.994617;RPB=0.913247;SGB=21.6609;VDB=0.772611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.1:26362943 chr01:026362943 0 W/26362943-26362943 FN2591-S SNP G -> T AC=1;AN=198;BQB=0.945983;DP=2696;DP4=1036,1148,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.0180882;MQSB=2.57789e-31;RPB=0.633125;SGB=18.5788;VDB=0.267469;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.1:26363480 chr01:026363480 0 W/26363480-26363480 FN863-S Single Base Substitution A-T INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1082-S.SNP.1:26368226 chr01:026368226 0 W/26368226-26368226 FN1082-S Single Base Substitution G-A INTRON HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN2318.SNP.1:26381098 chr01:026381098 0 W/26381098-26381098 FN2318 SNP G -> C AC=1;AN=192;BQB=0.999875;DP=4686;DP4=2227,2163,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00576184;MQB=0.00250084;MQSB=3.88936e-11;RPB=0.500129;SGB=25.5227;VDB=0.767716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:26384071 chr01:026384071 0 W/26384071-26384071 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.973145;DP=4804;DP4=2265,2245,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63394e-12;MQSB=0.511054;RPB=0.984851;SGB=65.5058;VDB=0.716729;EFF=INTRON(MODIFIER||||139|LOC_Os01g46370|protein_coding|CODING|LOC_Os01g46370.2|1|1) FN2754-S.SNP.1:26384082 chr01:026384082 0 W/26384082-26384082 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.667983;DP=4807;DP4=2194,2356,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38081e-10;MQSB=0.706555;RPB=0.599582;SGB=68.0801;VDB=0.473815;EFF=INTRON(MODIFIER||||139|LOC_Os01g46370|protein_coding|CODING|LOC_Os01g46370.2|1|1) FN1326-S.SNP.1:26384390 chr01:026384390 0 W/26384390-26384390 FN1326-S Single Base Substitution T-C INTRON HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3415-S.SNP.1:26386830 chr01:026386830 0 W/26386830-26386830 FN3415-S SNP G -> A AC=1;AN=184;BQB=0.901659;DP=3260;DP4=1351,1805,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.5256e-05;MQSB=0.993035;RPB=0.99931;SGB=28.7043;VDB=0.534701;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D27|139|LOC_Os01g46370|protein_coding|CODING|LOC_Os01g46370.2|1|1) FN476-S.SNP.1:26391738 chr01:026391738 0 W/26391738-26391738 FN476-S Single Base Substitution G-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-218.SNP.1:26393699 chr01:026393699 0 W/26393699-26393699 FN-218 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g46380 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1182-S.SNP.1:26407381 chr01:026407381 0 W/26407381-26407381 FN1182-S Single Base Substitution C-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN781-S.SNP.1:26416097 chr01:026416097 0 W/26416097-26416097 FN781-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g46410 leaf senescence related protein, putative, expressed SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1754-S.SNP.1:26418151 chr01:026418151 0 W/26418151-26418151 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.922727;DP=2145;DP4=662,1442,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4519e-05;MQSB=0.868363;RPB=0.763734;SGB=21.8113;VDB=0.173838;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN-115 Single Base Substitution G-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-200.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN-200 Single Base Substitution G-T INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-278.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN-278 Single Base Substitution G-T INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-60.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN-60 Single Base Substitution G-T INTERGENIC HOMO SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1058-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN1058-S Single Base Substitution G-T INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1363-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN1363-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1371-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN1371-S Single Base Substitution G-T INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN1551-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN1551-S Single Base Substitution G-T INTERGENIC Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2084-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN2084-S SNP G -> T AC=2;AN=168;BQB=0.700997;DP=2505;DP4=823,1621,7,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.04047e-10;MQSB=0.991289;RPB=0.755465;SGB=48.4712;VDB=0.0730311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN2282 SNP G -> T AC=2;AN=192;BQB=0.974791;DP=4496;DP4=2038,2116,30,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00044484;MQB=8.00531e-31;MQSB=0.90699;RPB=0.0411193;SGB=174.408;VDB=0.477487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN2469 SNP G -> T AC=2;AN=200;BQB=0.24966;DP=3745;DP4=1525,1928,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.02321e-14;MQSB=0.91516;RPB=0.0221539;SGB=65.9573;VDB=0.0266936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN2724-S SNP G -> T AC=1;AN=200;BQB=0.173651;DP=4070;DP4=1755,2064,3,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.41097e-09;MQSB=0.996169;RPB=0.249447;SGB=26.8797;VDB=0.691658;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN3288-S SNP G -> T AC=2;AN=184;BQB=0.875071;DP=3030;DP4=1467,1429,8,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.52491e-09;MQSB=0.990069;RPB=0.578304;SGB=60.4004;VDB=0.714389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN3592-S SNP G -> T AC=1;AN=188;BQB=0.364335;DP=3029;DP4=1565,1365,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75001e-08;MQSB=0.728398;RPB=0.629538;SGB=57.244;VDB=0.099267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN3749-S SNP G -> T AC=2;AN=190;BQB=0.991475;DP=2395;DP4=991,1289,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.93789e-08;MQSB=0.922594;RPB=0.842599;SGB=71.8647;VDB=0.470811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN3883-S SNP G -> T AC=2;AN=158;BQB=0.771293;DP=2231;DP4=916,1201,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.89546e-13;MQSB=0.999052;RPB=0.342768;SGB=77.8763;VDB=0.181098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN3978-S SNP G -> T AC=1;AN=168;BQB=0.867139;DP=2452;DP4=1087,1263,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.73646e-06;MQSB=0.998979;RPB=0.331794;SGB=21.0249;VDB=0.175095;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN555-S Single Base Substitution G-T INTERGENIC HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN983-S.SNP.1:26418162 chr01:026418162 0 W/26418162-26418162 FN983-S Single Base Substitution G-T INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN503-S.SNP.1:26422815 chr01:026422815 0 W/26422815-26422815 FN503-S Single Base Substitution C-T INTERGENIC HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN-198.SNP.1:26427216 chr01:026427216 0 W/26427216-26427216 FN-198 Single Base Substitution A-T INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2299.SNP.1:26428414 chr01:026428414 0 W/26428414-26428414 FN2299 SNP G -> A AC=2;AN=192;BQB=0.972683;DP=5216;DP4=2400,2516,16,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.16916e-19;MQSB=0.862781;RPB=0.998045;SGB=33.9487;VDB=0.992705;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y85|161|LOC_Os01g46450|protein_coding|CODING|LOC_Os01g46450.1|2|1) FN3968-S.SNP.1:26431631 chr01:026431631 0 W/26431631-26431631 FN3968-S SNP T -> A AC=1;AN=168;BQB=0.854092;DP=2425;DP4=1087,1243,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.49553e-08;MQSB=0.99527;RPB=0.988231;SGB=38.1788;VDB=0.185218;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P538|577|LOC_Os01g46470|protein_coding|CODING|LOC_Os01g46470.1|6|1) FN4258-S.SNP.1:26431666 chr01:026431666 0 W/26431666-26431666 FN4258-S SNP G -> A AC=1;AN=170;BQB=0.999008;DP=2427;DP4=1103,1259,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.1666e-08;MQSB=0.99898;RPB=0.997692;SGB=31.4354;VDB=0.194617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P527S|577|LOC_Os01g46470|protein_coding|CODING|LOC_Os01g46470.1|6|1) FN4258-S.SNP.1:26431667 chr01:026431667 0 W/26431667-26431667 FN4258-S SNP G -> T AC=1;AN=170;BQB=0.900216;DP=2423;DP4=1104,1258,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.07749e-08;MQSB=0.996792;RPB=0.819269;SGB=31.4354;VDB=0.323915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N526K|577|LOC_Os01g46470|protein_coding|CODING|LOC_Os01g46470.1|6|1) FN4133-S.SNP.1:26431975 chr01:026431975 0 W/26431975-26431975 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.957567;DP=2676;DP4=1378,1225,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.4045e-10;MQSB=0.979704;RPB=0.612159;SGB=46.1603;VDB=0.321211;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E424K|577|LOC_Os01g46470|protein_coding|CODING|LOC_Os01g46470.1|6|1) FN-135.SNP.1:26439290 chr01:026439290 0 W/26439290-26439290 FN-135 Single Base Substitution G-A INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN-287.SNP.1:26453043 chr01:026453043 0 W/26453043-26453043 FN-287 Single Base Substitution C-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN_841-7-2.SNP.1:26456736 chr01:026456736 0 W/26456736-26456736 FN_841-7-2 Single Base Substitution C-A HET LOC_Os01g46510 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN_841-7-2.SNP.1:26456739 chr01:026456739 0 W/26456739-26456739 FN_841-7-2 Single Base Substitution T-A HET LOC_Os01g46510 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN_841-7-2.SNP.1:26456740 chr01:026456740 0 W/26456740-26456740 FN_841-7-2 Single Base Substitution T-C HET LOC_Os01g46510 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN-100.SNP.1:26457437 chr01:026457437 0 W/26457437-26457437 FN-100 Single Base Substitution C-G INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN3714-S.SNP.1:26474428 chr01:026474428 0 W/26474428-26474428 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.956016;DP=2863;DP4=1517,1235,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52153e-07;MQSB=0.877692;RPB=0.977645;SGB=44.5415;VDB=0.354229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.1:26475075 chr01:026475075 0 W/26475075-26475075 FN2445 SNP A -> T AC=1;AN=200;BQB=0.943217;DP=4811;DP4=2267,2286,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207857;MQB=9.48878e-13;MQSB=0.953788;RPB=0.305033;SGB=17.5158;VDB=0.861499;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.1:26479235 chr01:026479235 0 W/26479235-26479235 FN1538-S Single Base Substitution A-T INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN1602-S.SNP.1:26482514 chr01:026482514 0 W/26482514-26482514 FN1602-S Single Base Substitution G-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2588-S.SNP.1:26483793 chr01:026483793 0 W/26483793-26483793 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.675145;DP=4093;DP4=1955,1880,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.56521e-09;MQSB=0.928903;RPB=0.551101;SGB=77.1196;VDB=0.819298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.1:26487522 chr01:026487522 0 W/26487522-26487522 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4038-S.SNP.1:26489809 chr01:026489809 0 W/26489809-26489809 FN4038-S SNP A -> G AC=1;AN=168;BQB=0.786933;DP=2685;DP4=1043,1515,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77678e-11;MQSB=0.900833;RPB=0.982301;SGB=44.0621;VDB=0.517672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.1:26512601 chr01:026512601 0 W/26512601-26512601 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.995504;DP=2684;DP4=1286,1322,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.1463e-07;MQSB=0.998051;RPB=0.975079;SGB=39.8925;VDB=0.916943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.1:26513128 chr01:026513128 0 W/26513128-26513128 FN3902-S SNP C -> A AC=1;AN=158;BQB=0.956707;DP=2254;DP4=973,1176,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.67303e-09;MQSB=0.892339;RPB=0.545868;SGB=55.806;VDB=0.886949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.1:26513266 chr01:026513266 0 W/26513266-26513266 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.712853;DP=4975;DP4=2216,2243,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.20431e-06;MQSB=0.951872;RPB=0.113698;SGB=28.7675;VDB=0.860019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.1:26518138 chr01:026518138 0 W/26518138-26518138 FN2430 SNP T -> A AC=1;AN=200;BQB=0.964199;DP=4507;DP4=2287,1749,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.98527e-15;MQSB=0.446546;RPB=0.759424;SGB=60.747;VDB=0.176088;EFF=INTRON(MODIFIER||||602|LOC_Os01g46570|protein_coding|CODING|LOC_Os01g46570.1|7|1),INTRON(MODIFIER||||553|LOC_Os01g46570|protein_coding|CODING|LOC_Os01g46570.2|7|1),INTRON(MODIFIER||||473|LOC_Os01g46570|protein_coding|CODING|LOC_Os01g46570.3|5|1) FN1196-S.SNP.1:26528654 chr01:026528654 0 W/26528654-26528654 FN1196-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g46580 actin-related protein 2/3 complex subunit 2, putative, expressed SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN3607-S.SNP.1:26530669 chr01:026530669 0 W/26530669-26530669 FN3607-S SNP C -> T AC=2;AN=190;BQB=0.999525;DP=3033;DP4=1499,1386,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.84863e-16;MQSB=0.899488;RPB=0.916296;SGB=92.9626;VDB=0.955602;EFF=INTRON(MODIFIER||||320|LOC_Os01g46580|protein_coding|CODING|LOC_Os01g46580.1|7|1) FN4025-S.SNP.1:26531814 chr01:026531814 0 W/26531814-26531814 FN4025-S SNP G -> C AC=2;AN=168;BQB=0.73369;DP=2230;DP4=1028,1076,10,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.89539e-18;MQSB=0.979851;RPB=0.947044;SGB=96.5026;VDB=0.929883;EFF=UTR_3_PRIME(MODIFIER||181||320|LOC_Os01g46580|protein_coding|CODING|LOC_Os01g46580.1|10|1) FN2596-S.SNP.1:26534250 chr01:026534250 0 W/26534250-26534250 FN2596-S SNP C -> G AC=1;AN=198;BQB=0.155781;DP=4641;DP4=2197,2215,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00421e-10;MQSB=0.675237;RPB=0.503484;SGB=39.7248;VDB=0.802827;EFF=INTRON(MODIFIER||||412|LOC_Os01g46610|protein_coding|CODING|LOC_Os01g46610.1|12|1) FN3424-S.SNP.1:26542707 chr01:026542707 0 W/26542707-26542707 FN3424-S SNP G -> A AC=1;AN=184;BQB=0.997761;DP=2966;DP4=1296,1599,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.07064e-12;MQSB=0.00649335;RPB=0.682087;SGB=93.9603;VDB=0.112637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.1:26549734 chr01:026549734 0 W/26549734-26549734 FN3776-S SNP A -> T AC=1;AN=190;BQB=0.833487;DP=4319;DP4=2763,1239,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.308868;MQB=0.00110098;MQSB=1.24131e-19;RPB=0.216533;SGB=16.5421;VDB=0.232708;EFF=INTRON(MODIFIER||||1165|LOC_Os01g46626|protein_coding|CODING|LOC_Os01g46626.1|1|1) FN953-S.SNP.1:26550665 chr01:026550665 0 W/26550665-26550665 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3467-S.SNP.1:26550688 chr01:026550688 0 W/26550688-26550688 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.559436;DP=5015;DP4=2760,2063,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0819541;MQB=0.668578;MQSB=0.0431735;RPB=0.567506;SGB=98.4821;VDB=0.489328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.1:26560679 chr01:026560679 0 W/26560679-26560679 FN2376 SNP A -> T AC=2;AN=192;BQB=0.890066;DP=4141;DP4=2139,1697,11,7;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.44778e-09;MQSB=0.913495;RPB=0.993795;SGB=-13.64;VDB=0.0513285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.1:26561629 chr01:026561629 0 W/26561629-26561629 FN1075-S Single Base Substitution A-G INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2292.SNP.1:26571566 chr01:026571566 0 W/26571566-26571566 FN2292 SNP G -> C AC=1;AN=192;BQB=0.968169;DP=3736;DP4=1925,1347,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000267666;MQB=0.000179264;MQSB=0.000141585;RPB=0.195651;SGB=39.78;VDB=0.264881;EFF=INTRON(MODIFIER||||1157|LOC_Os01g46660|protein_coding|CODING|LOC_Os01g46660.1|2|1) FN1477-S.SNP.1:26571718 chr01:026571718 0 W/26571718-26571718 FN1477-S Single Base Substitution G-C INTRON HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN-176.SNP.1:26574371 chr01:026574371 0 W/26574371-26574371 FN-176 Single Base Substitution G-C INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN476-S.SNP.1:26578676 chr01:026578676 0 W/26578676-26578676 FN476-S Single Base Substitution C-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN_788-1-1.SNP.1:26580321 chr01:026580321 0 W/26580321-26580321 FN_788-1-1 Single Base Substitution T-A Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN-265.SNP.1:26580846 chr01:026580846 0 W/26580846-26580846 FN-265 Single Base Substitution T-G INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2428.SNP.1:26580871 chr01:026580871 0 W/26580871-26580871 FN2428 SNP T -> C AC=2;AN=200;BQB=0.996727;DP=4730;DP4=2080,2437,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.98029e-17;MQSB=0.701324;RPB=0.846032;SGB=105.163;VDB=0.0544637;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.1:26588422 chr01:026588422 0 W/26588422-26588422 FN566-S Single Base Substitution C-A INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2730-S.SNP.1:26590618 chr01:026590618 0 W/26590618-26590618 FN2730-S SNP G -> T AC=1;AN=200;BQB=0.996578;DP=4361;DP4=1803,2209,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.04353e-09;MQSB=0.961585;RPB=0.543544;SGB=40.2696;VDB=0.0759712;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:26592249 chr01:026592249 0 W/26592249-26592249 FN788-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN940-S.SNP.1:26606164 chr01:026606164 0 W/26606164-26606164 FN940-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g46710 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3992-S.SNP.1:26607648 chr01:026607648 0 W/26607648-26607648 FN3992-S SNP T -> C AC=1;AN=168;BQB=0.268302;DP=2125;DP4=1047,886,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0167165;MQSB=0.442881;RPB=0.90561;SGB=10.0307;VDB=0.412662;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D183G|1350|LOC_Os01g46710|protein_coding|CODING|LOC_Os01g46710.1|1|1) FN3690-S.SNP.1:26613351 chr01:026613351 0 W/26613351-26613351 FN3690-S SNP G -> T AC=1;AN=190;BQB=0.986183;DP=3265;DP4=1568,1580,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.24867e-09;MQSB=0.999214;RPB=0.960596;SGB=46.7622;VDB=0.145089;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L245F|650|LOC_Os01g46720|protein_coding|CODING|LOC_Os01g46720.1|6|1) FN2350.SNP.1:26620390 chr01:026620390 0 W/26620390-26620390 FN2350 SNP C -> T AC=1;AN=192;BQB=0.664349;DP=4409;DP4=2164,1556,12,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.35191e-16;MQSB=0.516885;RPB=0.0541118;SGB=-120.288;VDB=0.615866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.1:26623929 chr01:026623929 0 W/26623929-26623929 FN2477 SNP T -> G AC=1;AN=200;BQB=0.38815;DP=4614;DP4=2458,1866,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.59659e-10;MQSB=0.408082;RPB=0.998535;SGB=86.5007;VDB=0.668428;EFF=INTRON(MODIFIER||||223|LOC_Os01g46740|protein_coding|CODING|LOC_Os01g46740.1|1|1) FN3992-S.SNP.1:26629602 chr01:026629602 0 W/26629602-26629602 FN3992-S SNP C -> G AC=1;AN=168;BQB=0.992207;DP=2743;DP4=1412,1209,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.58797e-10;MQSB=0.752163;RPB=0.916067;SGB=7.05233;VDB=0.561157;EFF=START_GAINED(LOW||||606|LOC_Os01g46750|protein_coding|CODING|LOC_Os01g46750.2|1|1),UTR_5_PRIME(MODIFIER||297||606|LOC_Os01g46750|protein_coding|CODING|LOC_Os01g46750.2|1|1),INTRON(MODIFIER||||656|LOC_Os01g46750|protein_coding|CODING|LOC_Os01g46750.1|1|1),INTRON(MODIFIER||||428|LOC_Os01g46750|protein_coding|CODING|LOC_Os01g46750.3|1|1) FN850-S.SNP.1:26631965 chr01:026631965 0 W/26631965-26631965 FN850-S Single Base Substitution A-G INTRON HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN-252.SNP.1:26635633 chr01:026635633 0 W/26635633-26635633 FN-252 Single Base Substitution A-T INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN987-S.SNP.1:26643352 chr01:026643352 0 W/26643352-26643352 FN987-S Single Base Substitution A-C INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN1339-S.SNP.1:26646918 chr01:026646918 0 W/26646918-26646918 FN1339-S Single Base Substitution C-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.1:26646918 chr01:026646918 0 W/26646918-26646918 FN2311 SNP C -> T AC=2;AN=192;BQB=0.273543;DP=4544;DP4=1937,2231,18,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.85022e-23;MQSB=0.137925;RPB=0.325814;SGB=204.398;VDB=0.838825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:26648096 chr01:026648096 0 W/26648096-26648096 FN3500-S SNP T -> A AC=2;AN=188;BQB=0.988847;DP=2560;DP4=1114,1357,5,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.56589e-12;MQSB=0.968775;RPB=0.952917;SGB=76.2387;VDB=0.5892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:26648097 chr01:026648097 0 W/26648097-26648097 FN3500-S SNP G -> A AC=2;AN=188;BQB=0.836854;DP=2548;DP4=1113,1340,5,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.86453e-12;MQSB=0.995428;RPB=0.986835;SGB=76.2387;VDB=0.601681;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:26648098 chr01:026648098 0 W/26648098-26648098 FN3500-S SNP G -> A AC=2;AN=188;BQB=0.997263;DP=2535;DP4=1106,1355,5,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.86483e-12;MQSB=0.99066;RPB=0.995258;SGB=76.2387;VDB=0.582925;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.1:26648848 chr01:026648848 0 W/26648848-26648848 FN-308 Single Base Substitution T-C INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN533-S.SNP.1:26653661 chr01:026653661 0 W/26653661-26653661 FN533-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g46760 protein phosphatase 2C, putative, expressed SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN999-S.SNP.1:26656645 chr01:026656645 0 W/26656645-26656645 FN999-S Single Base Substitution A-T INTRON HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3520-S.SNP.1:26661657 chr01:026661657 0 W/26661657-26661657 FN3520-S SNP C -> T AC=1;AN=188;BQB=0.763588;DP=2915;DP4=1582,1235,18,11;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.00686106;MQB=0.456284;MQSB=9.3145e-07;RPB=0.602392;SGB=59.139;VDB=0.826759;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.1:26664747 chr01:026664747 0 W/26664747-26664747 FN928-S Single Base Substitution G-A INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN441-S.SNP.1:26675722 chr01:026675722 0 W/26675722-26675722 FN441-S Single Base Substitution A-G INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1023-S.SNP.1:26677232 chr01:026677232 0 W/26677232-26677232 FN1023-S Single Base Substitution G-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2547-S.SNP.1:26681075 chr01:026681075 0 W/26681075-26681075 FN2547-S SNP G -> T AC=1;AN=198;BQB=0.959314;DP=3981;DP4=1912,1807,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000251193;MQB=2.83943e-08;MQSB=0.488055;RPB=0.623324;SGB=4.56404;VDB=0.957472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.1:26681075 chr01:026681075 0 W/26681075-26681075 FN3378-S SNP G -> T AC=1;AN=184;BQB=0.558133;DP=2504;DP4=1091,1338,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.35329e-08;MQSB=0.999298;RPB=0.376853;SGB=42.7914;VDB=0.827882;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.1:26681075 chr01:026681075 0 W/26681075-26681075 FN510-S Single Base Substitution G-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN508-S.SNP.1:26681081 chr01:026681081 0 W/26681081-26681081 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN-139.SNP.1:26686582 chr01:026686582 0 W/26686582-26686582 FN-139 Single Base Substitution G-A INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN505-S.SNP.1:26689124 chr01:026689124 0 W/26689124-26689124 FN505-S Single Base Substitution A-G INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2480.SNP.1:26692532 chr01:026692532 0 W/26692532-26692532 FN2480 SNP C -> T AC=2;AN=200;BQB=0.937249;DP=4716;DP4=2100,2363,12,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.03548e-19;MQSB=0.484239;RPB=0.245343;SGB=31.9623;VDB=0.0982474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.1:26692533 chr01:026692533 0 W/26692533-26692533 FN2480 SNP C -> T AC=2;AN=200;BQB=0.820579;DP=4734;DP4=2085,2353,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22527e-17;MQSB=0.62979;RPB=0.714168;SGB=101.557;VDB=0.112712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.1:26696404 chr01:026696404 0 W/26696404-26696404 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.392988;DP=4337;DP4=1888,2137,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00069889;MQSB=0.95697;RPB=0.97346;SGB=8.58354;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN777-S.SNP.1:26701032 chr01:026701032 0 W/26701032-26701032 FN777-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g46810 viral A-type inclusion protein repeat containing protein, expressed SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2599-S.SNP.1:26702659 chr01:026702659 0 W/26702659-26702659 FN2599-S SNP T -> C AC=1;AN=198;BQB=0.999922;DP=3898;DP4=1911,1813,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000256542;MQB=6.35352e-09;MQSB=0.171905;RPB=0.929214;SGB=67.9293;VDB=0.68766;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T454|1515|LOC_Os01g46810|protein_coding|CODING|LOC_Os01g46810.1|4|1) FN3286-S.SNP.1:26708387 chr01:026708387 0 W/26708387-26708387 FN3286-S SNP C -> A AC=1;AN=184;BQB=0.506534;DP=2525;DP4=1173,1268,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.70381e-05;MQSB=0.995061;RPB=0.761009;SGB=28.7043;VDB=0.975192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.1:26715616 chr01:026715616 0 W/26715616-26715616 FN1416-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1515-S.SNP.1:26716254 chr01:026716254 0 W/26716254-26716254 FN1515-S Single Base Substitution C-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1335-S.SNP.1:26716902 chr01:026716902 0 W/26716902-26716902 FN1335-S Single Base Substitution C-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3828-S.SNP.1:26726506 chr01:026726506 0 W/26726506-26726506 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.995226;DP=3298;DP4=1576,1621,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38695e-14;MQSB=0.978402;RPB=0.982408;SGB=68.0854;VDB=0.889706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D150Y|555|LOC_Os01g46860|protein_coding|CODING|LOC_Os01g46860.1|1|1) FN3828-S.SNP.1:26726507 chr01:026726507 0 W/26726507-26726507 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.512549;DP=3321;DP4=1557,1621,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03261e-13;MQSB=0.982197;RPB=0.772644;SGB=44.0907;VDB=0.616129;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G149|555|LOC_Os01g46860|protein_coding|CODING|LOC_Os01g46860.1|1|1) FN3800-S.SNP.1:26730225 chr01:026730225 0 W/26730225-26730225 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.811251;DP=2662;DP4=1315,1224,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7636e-06;MQSB=0.95684;RPB=0.928666;SGB=36.1006;VDB=0.701818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.1:26741041 chr01:026741041 0 W/26741041-26741041 FN2670-S SNP A -> T AC=2;AN=200;BQB=0.433162;DP=4567;DP4=2283,2017,36,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.47818e-38;MQSB=0.766045;RPB=0.999018;SGB=213.948;VDB=0.102819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.1:26749343 chr01:026749343 0 W/26749343-26749343 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.873767;DP=4508;DP4=2024,2113,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.19001e-07;MQSB=0.986323;RPB=0.998858;SGB=23.6597;VDB=0.288116;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.1:26756711 chr01:026756711 0 W/26756711-26756711 FN798-S Single Base Substitution C-G INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN796-S.SNP.1:26760468 chr01:026760468 0 W/26760468-26760468 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN914-S.SNP.1:26762137 chr01:026762137 0 W/26762137-26762137 FN914-S Single Base Substitution C-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-216.SNP.1:26767556 chr01:026767556 0 W/26767556-26767556 FN-216 Single Base Substitution G-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN886-S.SNP.1:26767897 chr01:026767897 0 W/26767897-26767897 FN886-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN-219.SNP.1:26771518 chr01:026771518 0 W/26771518-26771518 FN-219 Single Base Substitution G-A INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN3339-S.SNP.1:26772652 chr01:026772652 0 W/26772652-26772652 FN3339-S SNP G -> T AC=1;AN=184;BQB=0.974392;DP=2633;DP4=1357,1193,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.93409e-06;MQSB=0.822241;RPB=0.895899;SGB=35.1773;VDB=0.682146;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.1:26775954 chr01:026775954 0 W/26775954-26775954 FN-114 Single Base Substitution A-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN4052-S.SNP.1:26780420 chr01:026780420 0 W/26780420-26780420 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.539525;DP=2385;DP4=1020,1246,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.89563e-10;MQSB=0.947487;RPB=0.624931;SGB=96.481;VDB=0.319827;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.1:26780869 chr01:026780869 0 W/26780869-26780869 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.584644;DP=2356;DP4=1125,1158,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30199e-07;MQSB=0.978579;RPB=0.991633;SGB=46.3132;VDB=0.975739;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.1:26786895 chr01:026786895 0 W/26786895-26786895 FN224-S Single Base Substitution A-T INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN-105.SNP.1:26790232 chr01:026790232 0 W/26790232-26790232 FN-105 Single Base Substitution T-C INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN1568-S.SNP.1:26792150 chr01:026792150 0 W/26792150-26792150 FN1568-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g46950 aldose 1-epimerase, putative, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2446.SNP.1:26797364 chr01:026797364 0 W/26797364-26797364 FN2446 SNP G -> T AC=2;AN=200;BQB=0.739938;DP=5107;DP4=2092,2746,15,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.34202e-22;MQSB=0.973715;RPB=0.860041;SGB=89.4038;VDB=0.97214;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.1:26798358 chr01:026798358 0 W/26798358-26798358 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.608395;DP=2939;DP4=1274,1518,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70846e-06;MQSB=0.717507;RPB=0.782823;SGB=39.2697;VDB=0.337067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.1:26805829 chr01:026805829 0 W/26805829-26805829 FN2461 SNP C -> T AC=1;AN=200;BQB=0.942188;DP=4747;DP4=2361,2081,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76696e-08;MQSB=0.914316;RPB=0.983825;SGB=-34.5259;VDB=0.994553;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.1:26808711 chr01:026808711 0 W/26808711-26808711 FN875-S Single Base Substitution C-A INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN875-S.SNP.1:26808712 chr01:026808712 0 W/26808712-26808712 FN875-S Single Base Substitution G-A INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3626-S.SNP.1:26809866 chr01:026809866 0 W/26809866-26809866 FN3626-S SNP A -> C AC=1;AN=190;BQB=0.91165;DP=2697;DP4=1399,1186,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.42512e-05;MQSB=0.974384;RPB=0.33173;SGB=26.3271;VDB=0.632197;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.1:26813929 chr01:026813929 0 W/26813929-26813929 FN743-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g46980 vacuolar ATP synthase subunit E, putative, expressed SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN743-S.SNP.1:26813931 chr01:026813931 0 W/26813931-26813931 FN743-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g46980 vacuolar ATP synthase subunit E, putative, expressed SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN-406.SNP.1:26825589 chr01:026825589 0 W/26825589-26825589 FN-406 Single Base Substitution T-A INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-406.SNP.1:26825590 chr01:026825590 0 W/26825590-26825590 FN-406 Single Base Substitution G-A INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN_814-7-1.SNP.1:26829784 chr01:026829784 0 W/26829784-26829784 FN_814-7-1 Single Base Substitution A-G Homo LOC_Os01g46990 expressed protein SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2774-S.SNP.1:26845503 chr01:026845503 0 W/26845503-26845503 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.467339;DP=4126;DP4=2058,1897,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.34165e-10;MQSB=0.938528;RPB=0.658799;SGB=9.3494;VDB=0.184493;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.1:26848258 chr01:026848258 0 W/26848258-26848258 FN622-S Single Base Substitution G-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3933-S.SNP.1:26868939 chr01:026868939 0 W/26868939-26868939 FN3933-S SNP A -> T AC=2;AN=158;BQB=0.903781;DP=2846;DP4=1141,1590,16,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.51345e-20;MQSB=0.998053;RPB=0.957528;SGB=143.195;VDB=0.403755;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.1:26876338 chr01:026876338 0 W/26876338-26876338 FN1272-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN3475-S.SNP.1:26884869 chr01:026884869 0 W/26884869-26884869 FN3475-S SNP C -> T AC=2;AN=184;BQB=0.999533;DP=2518;DP4=1131,1254,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.11185e-16;MQSB=0.973578;RPB=0.673043;SGB=130.135;VDB=0.0661492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.1:26888460 chr01:026888460 0 W/26888460-26888460 FN1383-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN-279.SNP.1:26890903 chr01:026890903 0 W/26890903-26890903 FN-279 Single Base Substitution A-T INTRON HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN696-S.SNP.1:26896431 chr01:026896431 0 W/26896431-26896431 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1508-S.SNP.1:26896886 chr01:026896886 0 W/26896886-26896886 FN1508-S Single Base Substitution G-C INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1448-S.SNP.1:26901884 chr01:026901884 0 W/26901884-26901884 FN1448-S Single Base Substitution C-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN914-S.SNP.1:26909736 chr01:026909736 0 W/26909736-26909736 FN914-S Single Base Substitution C-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3815-S.SNP.1:26914163 chr01:026914163 0 W/26914163-26914163 FN3815-S SNP A -> G AC=2;AN=190;BQB=0.91089;DP=2420;DP4=1204,1123,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.91726e-10;MQSB=0.999709;RPB=0.476509;SGB=33.8752;VDB=0.408857;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:26914168 chr01:026914168 0 W/26914168-26914168 FN3815-S SNP C -> T AC=2;AN=190;BQB=0.450942;DP=2458;DP4=1204,1165,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.55007e-11;MQSB=0.993352;RPB=0.933562;SGB=33.8752;VDB=0.0837159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.1:26916246 chr01:026916246 0 W/26916246-26916246 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.991836;DP=2653;DP4=1296,1298,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67492e-08;MQSB=0.990896;RPB=0.918116;SGB=43.0708;VDB=0.642606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M14I|121|LOC_Os01g47110|protein_coding|CODING|LOC_Os01g47110.1|1|1) FN1240-S.SNP.1:26920313 chr01:026920313 0 W/26920313-26920313 FN1240-S Single Base Substitution T-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3514-S.SNP.1:26931193 chr01:026931193 0 W/26931193-26931193 FN3514-S SNP C -> T AC=2;AN=188;BQB=0.993531;DP=3025;DP4=1567,1374,19,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.58479e-15;MQSB=0.832581;RPB=0.905453;SGB=85.5904;VDB=0.0257712;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.1:26931290 chr01:026931290 0 W/26931290-26931290 FN4077-S SNP G -> A AC=2;AN=182;BQB=0.723756;DP=3209;DP4=1469,1655,11,17;HOB=0.0217365;ICB=0.494567;MQ=41;MQ0F=0.0280461;MQB=0.251277;MQSB=0.072973;RPB=0.408157;SGB=120.796;VDB=0.847029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.1:26932911 chr01:026932911 0 W/26932911-26932911 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.627566;DP=5194;DP4=2283,2670,22,13;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.308625;MQB=0.00144296;MQSB=0.00352817;RPB=0.671258;SGB=73.7109;VDB=0.637939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.1:26933308 chr01:026933308 0 W/26933308-26933308 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.585138;DP=3894;DP4=1853,1768,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0413457;MQB=0.00187378;MQSB=2.83062e-05;RPB=0.495891;SGB=63.3342;VDB=0.636348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.1:26936372 chr01:026936372 0 W/26936372-26936372 FN3787-S SNP T -> A AC=1;AN=190;BQB=0.774388;DP=2239;DP4=1116,1068,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0661009;MQB=0.672151;MQSB=1.53142e-11;RPB=0.584814;SGB=62.7569;VDB=0.87221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.1:26938522 chr01:026938522 0 W/26938522-26938522 FN1064-S Single Base Substitution T-C INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2574-S.SNP.1:26954868 chr01:026954868 0 W/26954868-26954868 FN2574-S SNP G -> A AC=1;AN=198;BQB=0.975948;DP=3941;DP4=1794,1952,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00202994;MQB=0.00192249;MQSB=0.999166;RPB=0.653049;SGB=14.9842;VDB=0.259914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.1:26956648 chr01:026956648 0 W/26956648-26956648 FN2252-S SNP G -> T AC=1;AN=190;BQB=0.924091;DP=3745;DP4=1612,1844,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0656876;MQB=0.373033;MQSB=1.31087e-29;RPB=0.928741;SGB=76.4186;VDB=0.538493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V150L|875|LOC_Os01g47160|protein_coding|CODING|LOC_Os01g47160.1|2|1) FN3446-S.SNP.1:26966659 chr01:026966659 0 W/26966659-26966659 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.967965;DP=3231;DP4=1160,1975,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000928505;MQB=4.0178e-06;MQSB=0.0726223;RPB=0.641431;SGB=89.4385;VDB=0.89073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.1:26969670 chr01:026969670 0 W/26969670-26969670 FN1692-S SNP T -> C AC=2;AN=188;BQB=0.0543392;DP=3485;DP4=1751,1685,14,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.27747e-19;MQSB=0.997012;RPB=0.695553;SGB=37.9474;VDB=0.889863;EFF=INTERGENIC(MODIFIER||||||||||1) W279-4-1.SNP.1:26980379 chr01:026980379 0 W/26980379-26980379 W279-4-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3522-S.SNP.1:26991669 chr01:026991669 0 W/26991669-26991669 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.846349;DP=3531;DP4=1800,1661,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00198244;MQB=0.00162159;MQSB=0.929793;RPB=0.938126;SGB=20.9896;VDB=0.803469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.1:26994345 chr01:026994345 0 W/26994345-26994345 FN2304 SNP G -> A AC=1;AN=192;BQB=0.00698424;DP=11829;DP4=4301,6676,33,22;HOB=5.42535e-05;ICB=0.000109072;MQ=23;MQ0F=0.196044;MQB=0.000290362;MQSB=0.00114223;RPB=0.272088;SGB=66.8;VDB=0.100878;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L762|1045|LOC_Os01g47240|protein_coding|CODING|LOC_Os01g47240.1|2|1) FN2311.SNP.1:26996560 chr01:026996560 0 W/26996560-26996560 FN2311 SNP G -> C AC=1;AN=192;BQB=0.522237;DP=5008;DP4=2546,2162,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.0838658;MQB=0.960889;MQSB=0;RPB=0.966214;SGB=126.804;VDB=0.89519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L1793V|2030|LOC_Os01g47250|protein_coding|CODING|LOC_Os01g47250.1|2|1) FN4017-S.SNP.1:26998787 chr01:026998787 0 W/26998787-26998787 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.936575;DP=3397;DP4=1945,1330,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.26023;MQB=0.710301;MQSB=0;RPB=0.751437;SGB=27.0464;VDB=0.86224;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1050|2030|LOC_Os01g47250|protein_coding|CODING|LOC_Os01g47250.1|2|1) FN3345-S.SNP.1:27008206 chr01:027008206 0 W/27008206-27008206 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.771442;DP=3271;DP4=1703,1431,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.6934e-08;MQSB=0.146488;RPB=0.625856;SGB=33.3622;VDB=0.662175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.1:27010153 chr01:027010153 0 W/27010153-27010153 FN2297 SNP T -> A AC=1;AN=192;BQB=0.190473;DP=4918;DP4=2320,2340,7,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.86474e-09;MQSB=0.846176;RPB=0.386296;SGB=15.1765;VDB=0.197448;EFF=INTRON(MODIFIER||||178|LOC_Os01g47262|protein_coding|CODING|LOC_Os01g47262.2|4|1) FN4300-S.SNP.1:27013198 chr01:027013198 0 W/27013198-27013198 FN4300-S SNP T -> C AC=1;AN=170;BQB=0.997583;DP=2800;DP4=1384,1308,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.48207e-06;MQSB=0.99757;RPB=0.890568;SGB=34.5445;VDB=0.2421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.1:27014370 chr01:027014370 0 W/27014370-27014370 FN2622-S SNP C -> T AC=2;AN=200;BQB=0.771936;DP=4885;DP4=2378,2189,32,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.8958e-32;MQSB=0.561897;RPB=0.636571;SGB=247.682;VDB=0.176688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R166H|264|LOC_Os01g47270|protein_coding|CODING|LOC_Os01g47270.1|1|1) FN2242-S.SNP.1:27019398 chr01:027019398 0 W/27019398-27019398 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.633572;DP=5002;DP4=2280,2347,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00031246;MQSB=0.154904;RPB=0.948212;SGB=-15.9914;VDB=0.451837;EFF=INTRON(MODIFIER||||193|LOC_Os01g47280|protein_coding|CODING|LOC_Os01g47280.1|1|1) FN_777-2-1.SNP.1:27023076 chr01:027023076 0 W/27023076-27023076 FN_777-2-1 Single Base Substitution G-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2583-S.SNP.1:27027747 chr01:027027747 0 W/27027747-27027747 FN2583-S SNP C -> A AC=1;AN=200;BQB=0.642891;DP=4636;DP4=2169,2190,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000215703;MQB=1.97743e-17;MQSB=0.548519;RPB=0.663285;SGB=132.552;VDB=0.532886;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.1:27028273 chr01:027028273 0 W/27028273-27028273 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.590005;DP=2354;DP4=1063,1241,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46009e-06;MQSB=0.51286;RPB=0.425028;SGB=65.6427;VDB=0.307546;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.1:27029229 chr01:027029229 0 W/27029229-27029229 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2134-S.SNP.1:27031193 chr01:027031193 0 W/27031193-27031193 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.0152722;DP=3250;DP4=1275,1947,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.33781e-06;MQSB=0.970729;RPB=0.58395;SGB=-150.343;VDB=0.180839;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.1:27040217 chr01:027040217 0 W/27040217-27040217 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1227-S.SNP.1:27064524 chr01:027064524 0 W/27064524-27064524 FN1227-S Single Base Substitution A-G INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2297.SNP.1:27066501 chr01:027066501 0 W/27066501-27066501 FN2297 SNP A -> G AC=1;AN=192;BQB=0.873979;DP=5109;DP4=2553,2265,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49059e-09;MQSB=0.976243;RPB=0.737544;SGB=72.0322;VDB=0.0870282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.1:27080258 chr01:027080258 0 W/27080258-27080258 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.184218;DP=5521;DP4=2397,2836,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0161e-08;MQSB=0.939847;RPB=0.819444;SGB=26.8797;VDB=0.437013;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.1:27100579 chr01:027100579 0 W/27100579-27100579 FN1018-S Single Base Substitution G-A INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1103-S.SNP.1:27100579 chr01:027100579 0 W/27100579-27100579 FN1103-S Single Base Substitution G-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2124-S.SNP.1:27111775 chr01:027111775 0 W/27111775-27111775 FN2124-S SNP G -> C AC=2;AN=168;BQB=0.121629;DP=4241;DP4=2135,2027,35,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.53234e-27;MQSB=0.943541;RPB=0.753551;SGB=-185.414;VDB=0.431998;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.1:27113660 chr01:027113660 0 W/27113660-27113660 FN799-S Single Base Substitution C-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN_822-5-1.SNP.1:27113676 chr01:027113676 0 W/27113676-27113676 FN_822-5-1 Single Base Substitution C-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN4087-S.SNP.1:27117306 chr01:027117306 0 W/27117306-27117306 FN4087-S SNP C -> A AC=2;AN=182;BQB=0.86929;DP=2800;DP4=1333,1390,12,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.3637e-16;MQSB=0.976303;RPB=0.691913;SGB=20.2582;VDB=0.396472;EFF=INTRON(MODIFIER||||474|LOC_Os01g47450|protein_coding|CODING|LOC_Os01g47450.1|3|1) FN2668-S.SNP.1:27119913 chr01:027119913 0 W/27119913-27119913 FN2668-S SNP G -> T AC=2;AN=200;BQB=0.451584;DP=5043;DP4=2380,2346,38,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47672e-32;MQSB=0.920565;RPB=0.209081;SGB=234.949;VDB=0.922164;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K434N|474|LOC_Os01g47450|protein_coding|CODING|LOC_Os01g47450.1|12|1) FN2612-S.SNP.1:27121899 chr01:027121899 0 W/27121899-27121899 FN2612-S SNP G -> T AC=1;AN=198;BQB=0.940708;DP=3478;DP4=1674,1663,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.33463e-08;MQSB=0.859816;RPB=0.797776;SGB=49.5489;VDB=0.0640987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.1:27121900 chr01:027121900 0 W/27121900-27121900 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.441357;DP=3469;DP4=1633,1563,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.09012e-08;MQSB=0.856684;RPB=0.946721;SGB=40.149;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.1:27123292 chr01:027123292 0 W/27123292-27123292 FN2395 SNP G -> A AC=1;AN=198;BQB=0.720448;DP=4423;DP4=2054,2020,16,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.65968e-13;MQSB=0.995805;RPB=0.96949;SGB=50.3263;VDB=0.33149;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.1:27124484 chr01:027124484 0 W/27124484-27124484 FN971-S Single Base Substitution A-T INTRON HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3923-S.SNP.1:27125027 chr01:027125027 0 W/27125027-27125027 FN3923-S SNP G -> A AC=2;AN=158;BQB=0.997854;DP=2345;DP4=1195,1060,15,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.62068e-12;MQSB=0.877828;RPB=0.975981;SGB=61.029;VDB=0.960001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R116K|558|LOC_Os01g47460|protein_coding|CODING|LOC_Os01g47460.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R116K|341|LOC_Os01g47460|protein_coding|CODING|LOC_Os01g47460.2|2|1) FN450-S.SNP.1:27136599 chr01:027136599 0 W/27136599-27136599 FN450-S Single Base Substitution A-G INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN_788-1-1.SNP.1:27149544 chr01:027149544 0 W/27149544-27149544 FN_788-1-1 Single Base Substitution C-T HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2274-S.SNP.1:27157074 chr01:027157074 0 W/27157074-27157074 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.717404;DP=4698;DP4=2249,2149,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76831e-07;MQSB=0.944593;RPB=0.980122;SGB=10.3266;VDB=0.854529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P535L|1034|LOC_Os01g47510|protein_coding|CODING|LOC_Os01g47510.1|1|1) FN1464-S.SNP.1:27159976 chr01:027159976 0 W/27159976-27159976 FN1464-S Single Base Substitution A-C INTRON HOMO SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-130.SNP.1:27160647 chr01:027160647 0 W/27160647-27160647 FN-130 Single Base Substitution C-G INTRON HET SNo: 130, Mutant_ID: FN-130, Generation: M2, Mutations: 30, Genes: 61, Seed availability: Yes. FN860-S.SNP.1:27165378 chr01:027165378 0 W/27165378-27165378 FN860-S Single Base Substitution A-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN815-S.SNP.1:27166095 chr01:027166095 0 W/27166095-27166095 FN815-S Single Base Substitution T-A INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN2317.SNP.1:27166096 chr01:027166096 0 W/27166096-27166096 FN2317 SNP A -> T AC=1;AN=192;BQB=0.769344;DP=4828;DP4=2395,2105,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207125;MQB=3.87835e-10;MQSB=0.724602;RPB=0.999999;SGB=28.9139;VDB=0.0376522;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.1:27166631 chr01:027166631 0 W/27166631-27166631 FN996-S Single Base Substitution C-T INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1355-S.SNP.1:27168430 chr01:027168430 0 W/27168430-27168430 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN910-S.SNP.1:27168784 chr01:027168784 0 W/27168784-27168784 FN910-S Single Base Substitution T-C INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3915-S.SNP.1:27170807 chr01:027170807 0 W/27170807-27170807 FN3915-S SNP A -> G AC=1;AN=158;BQB=0.904157;DP=2297;DP4=1213,974,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.12876e-08;MQSB=0.999777;RPB=0.884934;SGB=64.5449;VDB=0.0114827;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.1:27172883 chr01:027172883 0 W/27172883-27172883 FN389-S Single Base Substitution C-A INTRON HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-131.SNP.1:27172907 chr01:027172907 0 W/27172907-27172907 FN-131 Single Base Substitution T-C INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN1636-S.SNP.1:27174484 chr01:027174484 0 W/27174484-27174484 FN1636-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN3550-S.SNP.1:27174700 chr01:027174700 0 W/27174700-27174700 FN3550-S SNP T -> C AC=2;AN=188;BQB=0.998109;DP=2729;DP4=1428,1210,14,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.5038e-19;MQSB=0.991938;RPB=0.99994;SGB=110.393;VDB=0.245178;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F214|590|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F204|580|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F193|569|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F214|540|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.4|4|1) FN2265-S.SNP.1:27175618 chr01:027175618 0 W/27175618-27175618 FN2265-S SNP C -> A AC=1;AN=190;BQB=0.28038;DP=4787;DP4=2071,2374,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208899;MQB=4.49767e-10;MQSB=0.884245;RPB=0.232826;SGB=60.9777;VDB=0.368429;EFF=INTRON(MODIFIER||||590|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.1|4|1),INTRON(MODIFIER||||580|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.2|4|1),INTRON(MODIFIER||||569|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.3|4|1),INTRON(MODIFIER||||540|LOC_Os01g47530|protein_coding|CODING|LOC_Os01g47530.4|4|1) FN893-S.SNP.1:27178666 chr01:027178666 0 W/27178666-27178666 FN893-S Single Base Substitution A-G INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN-70.SNP.1:27180197 chr01:027180197 0 W/27180197-27180197 FN-70 Single Base Substitution A-T INTRON HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN982-S.SNP.1:27192841 chr01:027192841 0 W/27192841-27192841 FN982-S Single Base Substitution C-T INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2136-S.SNP.1:27196142 chr01:027196142 0 W/27196142-27196142 FN2136-S SNP G -> A AC=2;AN=168;BQB=0.784781;DP=3343;DP4=1719,1543,23,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.69748e-23;MQSB=0.972088;RPB=0.971344;SGB=-56.5804;VDB=0.952733;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.1:27199336 chr01:027199336 0 W/27199336-27199336 FN-269 Single Base Substitution G-C INTRON HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1310-S.SNP.1:27200105 chr01:027200105 0 W/27200105-27200105 FN1310-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1310-S.SNP.1:27200107 chr01:027200107 0 W/27200107-27200107 FN1310-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN-156.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN-156 Single Base Substitution T-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-8.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN-8 Single Base Substitution T-A INTERGENIC Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1014-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN1014-S Single Base Substitution T-A INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1122-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN1122-S Single Base Substitution T-A INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1523-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN1523-S Single Base Substitution T-A INTERGENIC Homo SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN2126-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN2126-S SNP T -> A AC=1;AN=168;BQB=0.877687;DP=2982;DP4=1369,1586,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000145856;MQSB=0.984264;RPB=0.890986;SGB=-4.39415;VDB=0.034237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN2272-S SNP T -> A AC=1;AN=188;BQB=0.829888;DP=4952;DP4=2231,2476,10,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.57631e-13;MQSB=0.000266581;RPB=0.993679;SGB=85.8548;VDB=0.819541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN3057-S SNP T -> A AC=1;AN=184;BQB=0.989186;DP=2803;DP4=1302,1388,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42663e-09;MQSB=0.967136;RPB=0.813839;SGB=66.8296;VDB=0.526185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN3387-S SNP T -> A AC=1;AN=184;BQB=0.999264;DP=2492;DP4=1172,1249,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.1238e-07;MQSB=0.836516;RPB=0.728722;SGB=53.2642;VDB=0.94984;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN3705-S SNP T -> A AC=2;AN=190;BQB=0.979052;DP=3019;DP4=1414,1492,12,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.43577e-10;MQSB=0.990143;RPB=0.432065;SGB=80.9724;VDB=0.0731423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN3785-S SNP T -> A AC=2;AN=190;BQB=0.971525;DP=2558;DP4=1193,1265,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.70223e-11;MQSB=0.984317;RPB=0.876962;SGB=36.4291;VDB=0.305483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN3994-S SNP T -> A AC=1;AN=168;BQB=0.744411;DP=2571;DP4=1211,1260,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000730822;MQSB=0.989456;RPB=0.99754;SGB=21.0249;VDB=0.328032;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.1:27206905 chr01:027206905 0 W/27206905-27206905 FN910-S Single Base Substitution T-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3811-S.SNP.1:27209795 chr01:027209795 0 W/27209795-27209795 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.706646;DP=2694;DP4=1202,1321,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000146781;MQSB=0.984218;RPB=0.695383;SGB=39.9877;VDB=0.649936;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.1:27210989 chr01:027210989 0 W/27210989-27210989 FN-192 Single Base Substitution G-A INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN770-S.SNP.1:27213089 chr01:027213089 0 W/27213089-27213089 FN770-S Single Base Substitution G-A INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2781-S.SNP.1:27213181 chr01:027213181 0 W/27213181-27213181 FN2781-S SNP T -> C AC=1;AN=198;BQB=0.795414;DP=4385;DP4=2122,2100,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.34499e-15;MQSB=0.999258;RPB=0.96802;SGB=100.095;VDB=0.0753572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:27213185 chr01:027213185 0 W/27213185-27213185 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.983571;DP=4410;DP4=2102,2096,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.22968e-15;MQSB=0.999446;RPB=0.923419;SGB=-7.88458;VDB=0.0825328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.1:27220059 chr01:027220059 0 W/27220059-27220059 FN3626-S SNP T -> A AC=1;AN=190;BQB=0.987765;DP=2904;DP4=1539,1255,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24115e-06;MQSB=0.983025;RPB=0.764248;SGB=25.439;VDB=0.0830571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.1:27220555 chr01:027220555 0 W/27220555-27220555 FN2240-S SNP G -> A AC=1;AN=190;BQB=0.566301;DP=4490;DP4=2047,2103,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01495e-10;MQSB=0.927303;RPB=0.968966;SGB=71.8647;VDB=0.0282596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.1:27226208 chr01:027226208 0 W/27226208-27226208 FN3430-S SNP G -> A AC=1;AN=184;BQB=0.647225;DP=3267;DP4=1722,1434,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92016e-09;MQSB=0.846134;RPB=0.164233;SGB=46.3132;VDB=0.99146;EFF=UTR_3_PRIME(MODIFIER||352||295|LOC_Os01g47580|protein_coding|CODING|LOC_Os01g47580.1|7|1),UTR_3_PRIME(MODIFIER||352||220|LOC_Os01g47580|protein_coding|CODING|LOC_Os01g47580.2|6|1) FN1638-S.SNP.1:27226548 chr01:027226548 0 W/27226548-27226548 FN1638-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN-28.SNP.1:27226771 chr01:027226771 0 W/27226771-27226771 FN-28 Single Base Substitution A-G INTRON Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN3775-S.SNP.1:27228929 chr01:027228929 0 W/27228929-27228929 FN3775-S SNP G -> A AC=1;AN=190;BQB=0.845752;DP=2920;DP4=1130,1682,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39269e-08;MQSB=0.998622;RPB=0.193206;SGB=43.2083;VDB=0.479998;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A179|295|LOC_Os01g47580|protein_coding|CODING|LOC_Os01g47580.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A104|220|LOC_Os01g47580|protein_coding|CODING|LOC_Os01g47580.2|4|1) FN3090-S.SNP.1:27233991 chr01:027233991 0 W/27233991-27233991 FN3090-S SNP T -> C AC=2;AN=184;BQB=0.788482;DP=2929;DP4=1148,1688,7,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.75526e-08;MQSB=0.994508;RPB=0.343765;SGB=71.3514;VDB=0.19277;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.1:27234683 chr01:027234683 0 W/27234683-27234683 FN970-S Single Base Substitution C-A INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1050-S.SNP.1:27234685 chr01:027234685 0 W/27234685-27234685 FN1050-S Single Base Substitution A-C INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN4201-S.SNP.1:27238700 chr01:027238700 0 W/27238700-27238700 FN4201-S SNP G -> C AC=1;AN=170;BQB=0.27983;DP=2620;DP4=1257,1297,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.73406e-07;MQSB=0.997954;RPB=0.961889;SGB=41.7633;VDB=0.881926;EFF=INTRON(MODIFIER||||133|LOC_Os01g47600|protein_coding|CODING|LOC_Os01g47600.1|3|1) FN1382-S.SNP.1:27253339 chr01:027253339 0 W/27253339-27253339 FN1382-S Single Base Substitution G-C INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-306.SNP.1:27265060 chr01:027265060 0 W/27265060-27265060 FN-306 Single Base Substitution G-A INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN471-S.SNP.1:27268603 chr01:027268603 0 W/27268603-27268603 FN471-S Single Base Substitution A-G INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN4050-S.SNP.1:27274527 chr01:027274527 0 W/27274527-27274527 FN4050-S SNP C -> T AC=1;AN=168;BQB=0.822919;DP=2846;DP4=1507,1231,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.25925e-08;MQSB=0.979734;RPB=0.0543857;SGB=4.1907;VDB=0.0774566;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.1:27274591 chr01:027274591 0 W/27274591-27274591 FN2709-S SNP A -> C AC=1;AN=200;BQB=0.403343;DP=4832;DP4=2533,2133,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.29294e-08;MQSB=0.999461;RPB=0.378296;SGB=33.0593;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.1:27277478 chr01:027277478 0 W/27277478-27277478 FN1508-S Single Base Substitution G-T INTRON HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3714-S.SNP.1:27281072 chr01:027281072 0 W/27281072-27281072 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.994431;DP=2353;DP4=965,1290,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.18659e-08;MQSB=0.963083;RPB=0.48799;SGB=49.0954;VDB=0.509944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.1:27284239 chr01:027284239 0 W/27284239-27284239 FN3823-S SNP C -> G AC=2;AN=190;BQB=0.899582;DP=3134;DP4=1533,1419,16,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.28138e-19;MQSB=0.98786;RPB=0.744221;SGB=149.281;VDB=0.182184;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.1:27290597 chr01:027290597 0 W/27290597-27290597 FN-146 Single Base Substitution A-T INTRON HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3650-S.SNP.1:27290737 chr01:027290737 0 W/27290737-27290737 FN3650-S SNP A -> T AC=1;AN=190;BQB=0.575263;DP=3003;DP4=1365,1486,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.69144e-07;MQSB=0.903864;RPB=0.998906;SGB=28.9929;VDB=0.296572;EFF=INTRON(MODIFIER||||533|LOC_Os01g47710|protein_coding|CODING|LOC_Os01g47710.1|2|1) FN1000-S.SNP.1:27295156 chr01:027295156 0 W/27295156-27295156 FN1000-S Single Base Substitution C-A INTERGENIC HOMO SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3846-S.SNP.1:27296395 chr01:027296395 0 W/27296395-27296395 FN3846-S SNP C -> A AC=1;AN=190;BQB=0.999081;DP=3236;DP4=1577,1539,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91766e-14;MQSB=0.882414;RPB=0.574896;SGB=121.957;VDB=0.64401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1459-S.SNP.1:27296844 chr01:027296844 0 W/27296844-27296844 FN1459-S Single Base Substitution A-T INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN551-S.SNP.1:27300074 chr01:027300074 0 W/27300074-27300074 FN551-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g47720 expressed protein SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN867-S.SNP.1:27303119 chr01:027303119 0 W/27303119-27303119 FN867-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN955-S.SNP.1:27316439 chr01:027316439 0 W/27316439-27316439 FN955-S Single Base Substitution T-C INTERGENIC HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN1266-S.SNP.1:27328086 chr01:027328086 0 W/27328086-27328086 FN1266-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN1266-S.SNP.1:27328089 chr01:027328089 0 W/27328089-27328089 FN1266-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN_789-3-1.SNP.1:27328611 chr01:027328611 0 W/27328611-27328611 FN_789-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN4050-S.SNP.1:27330076 chr01:027330076 0 W/27330076-27330076 FN4050-S SNP C -> T AC=1;AN=168;BQB=0.865927;DP=2308;DP4=892,1324,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.78927e-08;MQSB=0.815484;RPB=0.98446;SGB=34.748;VDB=0.162805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.1:27331991 chr01:027331991 0 W/27331991-27331991 FN1257-S Single Base Substitution T-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1732-S.SNP.1:27342952 chr01:027342952 0 W/27342952-27342952 FN1732-S SNP C -> A AC=2;AN=188;BQB=0.614097;DP=2818;DP4=1472,1261,22,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65838e-20;MQSB=0.987333;RPB=0.916731;SGB=84.5719;VDB=0.29007;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.1:27361651 chr01:027361651 0 W/27361651-27361651 FN1456-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g47800 AAA-type ATPase family protein, putative, expressed SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2434.SNP.1:27373550 chr01:027373550 0 W/27373550-27373550 FN2434 SNP A -> G AC=2;AN=200;BQB=0.999999;DP=3874;DP4=1772,1867,6,4;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.29229e-06;MQSB=0.0833652;RPB=0.632758;SGB=25.849;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.1:27373550 chr01:027373550 0 W/27373550-27373550 FN_949-1 Single Base Substitution A-G Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN-393.SNP.1:27376743 chr01:027376743 0 W/27376743-27376743 FN-393 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g47820 S-locus-like receptor protein kinase, putative, expressed SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3880-S.SNP.1:27379457 chr01:027379457 0 W/27379457-27379457 FN3880-S SNP C -> A AC=2;AN=158;BQB=0.804388;DP=2437;DP4=1146,1175,17,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.69914e-18;MQSB=0.883715;RPB=0.463004;SGB=56.991;VDB=0.206469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.1:27379459 chr01:027379459 0 W/27379459-27379459 FN3880-S SNP T -> A AC=2;AN=158;BQB=0.873329;DP=2447;DP4=1166,1144,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.78708e-18;MQSB=0.898871;RPB=0.601092;SGB=84.6152;VDB=0.158099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.1:27379991 chr01:027379991 0 W/27379991-27379991 FN3910-S SNP G -> T AC=1;AN=158;BQB=0.959493;DP=2157;DP4=975,1086,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.28399e-06;MQSB=0.964753;RPB=0.760027;SGB=23.9652;VDB=0.340495;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.1:27385679 chr01:027385679 0 W/27385679-27385679 FN3371-S SNP A -> G AC=1;AN=184;BQB=0.869669;DP=3028;DP4=1528,1372,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75332e-08;MQSB=0.993633;RPB=0.936163;SGB=53.2642;VDB=0.222179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.1:27387925 chr01:027387925 0 W/27387925-27387925 FN2735-S SNP C -> A AC=2;AN=200;BQB=0.865556;DP=4983;DP4=2580,2147,10,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.0289e-17;MQSB=0.724251;RPB=0.934687;SGB=141.763;VDB=0.963581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aAa|T452K|781|LOC_Os01g47840|protein_coding|CODING|LOC_Os01g47840.1|1|1) FN2083-S.SNP.1:27404544 chr01:027404544 0 W/27404544-27404544 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.856438;DP=4504;DP4=2375,1845,122,120;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0315275;MQB=0;MQSB=3.04687e-07;RPB=0.000153215;SGB=-2714.88;VDB=0.969235;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.1:27405029 chr01:027405029 0 W/27405029-27405029 W674-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3662-S.SNP.1:27412874 chr01:027412874 0 W/27412874-27412874 FN3662-S SNP G -> A AC=2;AN=190;BQB=0.999406;DP=2338;DP4=930,1310,8,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.04249e-16;MQSB=0.166174;RPB=0.660142;SGB=144.727;VDB=0.427031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.1:27416089 chr01:027416089 0 W/27416089-27416089 FN1512-S Single Base Substitution C-G INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3834-S.SNP.1:27423195 chr01:027423195 0 W/27423195-27423195 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.189144;DP=2431;DP4=1272,1045,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000118528;MQSB=0.798362;RPB=0.646148;SGB=58.2031;VDB=0.335261;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.1:27435822 chr01:027435822 0 W/27435822-27435822 FN525-S Single Base Substitution T-C INTERGENIC HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3330-S.SNP.1:27445393 chr01:027445393 0 W/27445393-27445393 FN3330-S SNP T -> C AC=2;AN=184;BQB=0.993272;DP=3083;DP4=1440,1499,14,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.0016218;MQB=1.85742e-10;MQSB=0.951657;RPB=0.228883;SGB=74.4875;VDB=0.203229;EFF=INTRON(MODIFIER||||538|LOC_Os01g47960|protein_coding|CODING|LOC_Os01g47960.1|2|1) FN628-S.SNP.1:27452066 chr01:027452066 0 W/27452066-27452066 FN628-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g47970 retrotransposon protein, putative, unclassified, expressed SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN845-S.SNP.1:27454424 chr01:027454424 0 W/27454424-27454424 FN845-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN1131-S.SNP.1:27457021 chr01:027457021 0 W/27457021-27457021 FN1131-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1490-S.SNP.1:27461801 chr01:027461801 0 W/27461801-27461801 FN1490-S Single Base Substitution A-T INTRON Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2083-S.SNP.1:27464939 chr01:027464939 0 W/27464939-27464939 FN2083-S SNP G -> C AC=1;AN=168;BQB=2.74565e-06;DP=2459;DP4=1289,1054,70,28;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00244002;MQB=0;MQSB=0.138703;RPB=0.103295;SGB=-1197.61;VDB=1.67152e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.1:27464983 chr01:027464983 0 W/27464983-27464983 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.955632;DP=2397;DP4=1356,935,57,36;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00584063;MQB=0;MQSB=0.103564;RPB=0.000251752;SGB=-1007.01;VDB=0.00117435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.1:27466256 chr01:027466256 0 W/27466256-27466256 FN1325-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN-217.SNP.1:27468427 chr01:027468427 0 W/27468427-27468427 FN-217 Single Base Substitution C-G INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1719-S.SNP.1:27468427 chr01:027468427 0 W/27468427-27468427 FN1719-S SNP C -> G AC=2;AN=188;BQB=0.555919;DP=3887;DP4=1925,1904,16,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.09125e-20;MQSB=0.983834;RPB=0.0238808;SGB=135.196;VDB=0.908865;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.1:27468427 chr01:027468427 0 W/27468427-27468427 FN666-S Single Base Substitution C-G INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2317.SNP.1:27468759 chr01:027468759 0 W/27468759-27468759 FN2317 SNP G -> C AC=2;AN=192;BQB=0.086434;DP=4759;DP4=2384,2110,13,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.30981e-14;MQSB=0.948051;RPB=0.276721;SGB=-77.4217;VDB=0.595071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.1:27468775 chr01:027468775 0 W/27468775-27468775 FN1315-S Single Base Substitution C-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN779-S.SNP.1:27470637 chr01:027470637 0 W/27470637-27470637 FN779-S Single Base Substitution C-T INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN-406.SNP.1:27478198 chr01:027478198 0 W/27478198-27478198 FN-406 Single Base Substitution G-A INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN465-S.SNP.1:27478215 chr01:027478215 0 W/27478215-27478215 FN465-S Single Base Substitution T-C INTERGENIC HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2685-S.SNP.1:27492239 chr01:027492239 0 W/27492239-27492239 FN2685-S SNP C -> T AC=2;AN=200;BQB=0.694726;DP=5058;DP4=2696,2061,21,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.90107e-21;MQSB=0.917094;RPB=0.988407;SGB=71.1676;VDB=0.856466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.1:27492872 chr01:027492872 0 W/27492872-27492872 FN3374-S SNP T -> A AC=1;AN=184;BQB=0.77815;DP=4002;DP4=2115,1735,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.52832e-11;MQSB=0.999991;RPB=0.906452;SGB=75.8731;VDB=0.777079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.1:27495810 chr01:027495810 0 W/27495810-27495810 FN1349-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN4041-S.SNP.1:27502859 chr01:027502859 0 W/27502859-27502859 FN4041-S SNP T -> C AC=1;AN=168;BQB=0.546263;DP=2713;DP4=1281,1295,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.96224e-05;MQSB=0.997625;RPB=0.249792;SGB=27.8864;VDB=0.682947;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E457|701|LOC_Os01g48060|protein_coding|CODING|LOC_Os01g48060.3|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E461|722|LOC_Os01g48060|protein_coding|CODING|LOC_Os01g48060.1|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E457|718|LOC_Os01g48060|protein_coding|CODING|LOC_Os01g48060.2|10|1) FN2794-S.SNP.1:27509751 chr01:027509751 0 W/27509751-27509751 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.540995;DP=3939;DP4=1827,1913,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.46317e-08;MQSB=0.951515;RPB=0.855243;SGB=54.144;VDB=0.551981;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.1:27512384 chr01:027512384 0 W/27512384-27512384 FN807-S Single Base Substitution C-G INTERGENIC HOMO SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3710-S.SNP.1:27514412 chr01:027514412 0 W/27514412-27514412 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.820131;DP=2988;DP4=1217,1632,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22504e-08;MQSB=0.99836;RPB=0.942744;SGB=39.6545;VDB=0.412929;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.1:27519110 chr01:027519110 0 W/27519110-27519110 FN778-S Single Base Substitution A-C INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1184-S.SNP.1:27524365 chr01:027524365 0 W/27524365-27524365 FN1184-S Single Base Substitution A-T INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3693-S.SNP.1:27526304 chr01:027526304 0 W/27526304-27526304 FN3693-S SNP G -> A AC=1;AN=190;BQB=0.985323;DP=2793;DP4=1188,1503,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.9529e-05;MQSB=0.97339;RPB=0.941457;SGB=21.8853;VDB=0.774083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.1:27533065 chr01:027533065 0 W/27533065-27533065 FN3775-S SNP C -> T AC=1;AN=190;BQB=0.999026;DP=2892;DP4=1459,1331,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05643e-07;MQSB=0.997116;RPB=0.886351;SGB=53.6492;VDB=0.925403;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S51|214|LOC_Os01g48080|protein_coding|CODING|LOC_Os01g48080.1|1|1) FN-55.SNP.1:27539906 chr01:027539906 0 W/27539906-27539906 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN2493.SNP.1:27541357 chr01:027541357 0 W/27541357-27541357 FN2493 SNP T -> C AC=1;AN=200;BQB=0.767906;DP=4499;DP4=2208,1854,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.80228e-10;MQSB=0.246742;RPB=0.949397;SGB=32.0901;VDB=0.0572346;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F130|165|LOC_Os01g48100|protein_coding|CODING|LOC_Os01g48100.1|1|1) FN3987-S.SNP.1:27542905 chr01:027542905 0 W/27542905-27542905 FN3987-S SNP C -> T AC=1;AN=168;BQB=0.700766;DP=2843;DP4=1264,1454,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00105522;MQB=7.27277e-08;MQSB=0.0506319;RPB=0.997153;SGB=58.7637;VDB=0.959273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R55C|69|LOC_Os01g48110|protein_coding|CODING|LOC_Os01g48110.1|2|1) FN1053-S.SNP.1:27547511 chr01:027547511 0 W/27547511-27547511 FN1053-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g48120 expressed protein SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN3579-S.SNP.1:27549198 chr01:027549198 0 W/27549198-27549198 FN3579-S SNP C -> T AC=2;AN=188;BQB=0.8873;DP=2746;DP4=1254,1395,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000364166;MQB=1.89012e-11;MQSB=0.988429;RPB=0.931083;SGB=60.7873;VDB=0.74324;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.1:27551727 chr01:027551727 0 W/27551727-27551727 FN4103-S SNP C -> T AC=1;AN=182;BQB=0.820986;DP=3139;DP4=1417,1654,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.127748;MQB=0.810654;MQSB=0;RPB=0.9536;SGB=57.644;VDB=0.930262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.1:27570643 chr01:027570643 0 W/27570643-27570643 FN3592-S SNP G -> T AC=1;AN=188;BQB=0.909455;DP=3096;DP4=1319,1640,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.64829e-07;MQSB=0.83153;RPB=0.507986;SGB=53.5223;VDB=0.190299;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.1:27571943 chr01:027571943 0 W/27571943-27571943 FN4177-S SNP T -> C AC=1;AN=170;BQB=0.347764;DP=2344;DP4=1085,1174,8,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.51715e-10;MQSB=0.879104;RPB=0.452151;SGB=11.5457;VDB=0.853216;EFF=STOP_LOST(HIGH|MISSENSE|Tga/Cga|*59R|58|LOC_Os01g48150|protein_coding|CODING|LOC_Os01g48150.1|2|1) FN-193.SNP.1:27574330 chr01:027574330 0 W/27574330-27574330 FN-193 Single Base Substitution C-A INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN3970-S.SNP.1:27577500 chr01:027577500 0 W/27577500-27577500 FN3970-S SNP A -> T AC=2;AN=168;BQB=0.652734;DP=2809;DP4=1328,1299,21,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.9718e-21;MQSB=0.721341;RPB=0.964604;SGB=-4.17128;VDB=0.736847;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.1:27598377 chr01:027598377 0 W/27598377-27598377 FN509-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g48180 DDT domain containing protein, putative, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3413-S.SNP.1:27605111 chr01:027605111 0 W/27605111-27605111 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.984543;DP=3420;DP4=1497,1825,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.09646e-07;MQSB=0.975047;RPB=0.555715;SGB=32.2261;VDB=0.170559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.1:27608620 chr01:027608620 0 W/27608620-27608620 FN2366 SNP A -> T AC=2;AN=192;BQB=0.139131;DP=4873;DP4=2268,2182,24,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.37172e-27;MQSB=0.892078;RPB=0.487417;SGB=-51.0113;VDB=0.270866;EFF=UTR_5_PRIME(MODIFIER||3||469|LOC_Os01g48200|protein_coding|CODING|LOC_Os01g48200.1|1|1) FN414-S.SNP.1:27610781 chr01:027610781 0 W/27610781-27610781 FN414-S Single Base Substitution C-T INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2550-S.SNP.1:27618262 chr01:027618262 0 W/27618262-27618262 FN2550-S SNP C -> T AC=2;AN=198;BQB=0.427668;DP=3649;DP4=1831,1608,9,2;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=6.64416e-05;MQSB=0.129542;RPB=0.559425;SGB=44.9538;VDB=0.453287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.1:27618486 chr01:027618486 0 W/27618486-27618486 FN3522-S SNP A -> G AC=1;AN=188;BQB=0.426667;DP=2955;DP4=1705,1143,14,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.47762e-06;MQSB=0.84627;RPB=0.503047;SGB=67.1521;VDB=0.519871;EFF=INTERGENIC(MODIFIER||||||||||1) FN-97.SNP.1:27621716 chr01:027621716 0 W/27621716-27621716 FN-97 Single Base Substitution C-T INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN445-S.SNP.1:27621839 chr01:027621839 0 W/27621839-27621839 FN445-S Single Base Substitution T-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2302.SNP.1:27623531 chr01:027623531 0 W/27623531-27623531 FN2302 SNP C -> T AC=1;AN=192;BQB=0.990704;DP=4748;DP4=2194,2156,13,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68229e-19;MQSB=0.86688;RPB=0.395651;SGB=75.0722;VDB=0.647652;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.1:27632983 chr01:027632983 0 W/27632983-27632983 FN-392 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g48220 protein of unknown function DUF1421 domain containing protein, expressed SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN4260-S.SNP.1:27634173 chr01:027634173 0 W/27634173-27634173 FN4260-S SNP G -> T AC=1;AN=170;BQB=0.936592;DP=2822;DP4=1405,1319,18,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.17878e-15;MQSB=0.954991;RPB=0.99691;SGB=110.069;VDB=0.606313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.1:27645068 chr01:027645068 0 W/27645068-27645068 FN3881-S SNP C -> T AC=1;AN=158;BQB=0.862422;DP=2678;DP4=1230,1229,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000681676;MQSB=0.995756;RPB=0.999763;SGB=20.5959;VDB=0.290164;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.1:27646599 chr01:027646599 0 W/27646599-27646599 FN730-S Single Base Substitution G-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN3425-S.SNP.1:27649956 chr01:027649956 0 W/27649956-27649956 FN3425-S SNP C -> T AC=2;AN=184;BQB=0.889746;DP=1633;DP4=429,1109,8,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.8247e-08;MQSB=0.00107195;RPB=0.738865;SGB=28.3187;VDB=0.310456;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.1:27654293 chr01:027654293 0 W/27654293-27654293 FN891-S Single Base Substitution C-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2269-S.SNP.1:27662459 chr01:027662459 0 W/27662459-27662459 FN2269-S SNP A -> G AC=1;AN=190;BQB=0.976358;DP=5170;DP4=2691,2106,21,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.32129e-21;MQSB=0.728205;RPB=0.638616;SGB=117.84;VDB=0.139524;EFF=INTRON(MODIFIER||||410|LOC_Os01g48270|protein_coding|CODING|LOC_Os01g48270.1|8|1) FN1272-S.SNP.1:27666127 chr01:027666127 0 W/27666127-27666127 FN1272-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2263-S.SNP.1:27670077 chr01:027670077 0 W/27670077-27670077 FN2263-S SNP T -> A AC=2;AN=190;BQB=0.285278;DP=5078;DP4=2558,2159,24,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.46105e-23;MQSB=0.997346;RPB=0.730161;SGB=-47.9237;VDB=0.48348;EFF=INTRON(MODIFIER||||153|LOC_Os01g48280|protein_coding|CODING|LOC_Os01g48280.1|4|1) FN2637-S.SNP.1:27670077 chr01:027670077 0 W/27670077-27670077 FN2637-S SNP T -> A AC=2;AN=200;BQB=0.619203;DP=5100;DP4=2600,2267,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.16773e-23;MQSB=0.978497;RPB=0.347355;SGB=130.399;VDB=0.546872;EFF=INTRON(MODIFIER||||153|LOC_Os01g48280|protein_coding|CODING|LOC_Os01g48280.1|4|1) FN4032-S.SNP.1:27670077 chr01:027670077 0 W/27670077-27670077 FN4032-S SNP T -> A AC=1;AN=168;BQB=0.818913;DP=2711;DP4=1395,1180,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.42082e-07;MQSB=0.937502;RPB=0.792019;SGB=27.8864;VDB=0.0807261;EFF=INTRON(MODIFIER||||153|LOC_Os01g48280|protein_coding|CODING|LOC_Os01g48280.1|4|1) FN779-S.SNP.1:27673388 chr01:027673388 0 W/27673388-27673388 FN779-S Single Base Substitution G-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2458.SNP.1:27674562 chr01:027674562 0 W/27674562-27674562 FN2458 SNP A -> G AC=1;AN=200;BQB=0.999338;DP=4637;DP4=2212,2150,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.29549e-08;MQSB=0.990615;RPB=0.815566;SGB=33.0593;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.1:27687661 chr01:027687661 0 W/27687661-27687661 FN1735-S SNP G -> T AC=1;AN=188;BQB=0.82721;DP=2918;DP4=1290,1585,4,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.0649e-12;MQSB=0.926128;RPB=0.828098;SGB=11.7114;VDB=0.199571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:27687661 chr01:027687661 0 W/27687661-27687661 FN2781-S SNP G -> T AC=2;AN=198;BQB=0.9688;DP=4441;DP4=2229,1962,31,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.81874e-34;MQSB=0.965193;RPB=0.861484;SGB=12.9446;VDB=0.928449;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.1:27701157 chr01:027701157 0 W/27701157-27701157 FN4175-S SNP T -> G AC=2;AN=170;BQB=0.822855;DP=2882;DP4=1615,1156,17,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.28706e-19;MQSB=0.860561;RPB=0.980665;SGB=107.174;VDB=0.776248;EFF=INTRON(MODIFIER||||801|LOC_Os01g48330|protein_coding|CODING|LOC_Os01g48330.1|1|1) FN2485.SNP.1:27704866 chr01:027704866 0 W/27704866-27704866 FN2485 SNP G -> C AC=1;AN=200;BQB=0.882982;DP=4123;DP4=1720,2157,8,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.06966e-06;MQSB=0.951272;RPB=0.862729;SGB=65.5058;VDB=0.580114;EFF=UTR_3_PRIME(MODIFIER||192||194|LOC_Os01g48339|protein_coding|CODING|LOC_Os01g48339.1|2|1) FN2333.SNP.1:27711114 chr01:027711114 0 W/27711114-27711114 FN2333 SNP C -> T AC=2;AN=192;BQB=0.383526;DP=4592;DP4=1961,2280,19,18;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0;MQB=2.70885e-15;MQSB=1.31453e-09;RPB=0.562678;SGB=121.76;VDB=0.308838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.1:27711203 chr01:027711203 0 W/27711203-27711203 FN1326-S Single Base Substitution C-T INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3829-S.SNP.1:27713189 chr01:027713189 0 W/27713189-27713189 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.983136;DP=2217;DP4=1205,924,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.4415e-06;MQSB=0.999388;RPB=0.495755;SGB=44.5415;VDB=0.780124;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.1:27742150 chr01:027742150 0 W/27742150-27742150 FN-386 Single Base Substitution C-T INTERGENIC HOMO SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3819-S.SNP.1:27751109 chr01:027751109 0 W/27751109-27751109 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.9668;DP=2672;DP4=1342,1244,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41022e-08;MQSB=0.99159;RPB=0.922232;SGB=46.7622;VDB=0.71822;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.1:27753968 chr01:027753968 0 W/27753968-27753968 FN684-S Single Base Substitution G-A INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN3661-S.SNP.1:27757142 chr01:027757142 0 W/27757142-27757142 FN3661-S SNP G -> T AC=1;AN=190;BQB=0.931558;DP=2991;DP4=1426,1379,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98724e-13;MQSB=0.996938;RPB=0.21539;SGB=41.5369;VDB=0.0514898;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.1:27757143 chr01:027757143 0 W/27757143-27757143 FN3661-S SNP G -> T AC=1;AN=190;BQB=0.39195;DP=2979;DP4=1447,1361,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.55707e-12;MQSB=1;RPB=0.0504826;SGB=41.5369;VDB=0.0206695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.1:27759093 chr01:027759093 0 W/27759093-27759093 FN2595-S SNP C -> T AC=1;AN=198;BQB=0.906415;DP=4283;DP4=2023,2036,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.68199e-14;MQSB=0.869066;RPB=0.834727;SGB=-9.66994;VDB=0.894337;EFF=INTRON(MODIFIER||||446|LOC_Os01g48440|protein_coding|CODING|LOC_Os01g48440.1|2|1),INTRON(MODIFIER||||408|LOC_Os01g48440|protein_coding|CODING|LOC_Os01g48440.2|2|1),INTRON(MODIFIER||||407|LOC_Os01g48440|protein_coding|CODING|LOC_Os01g48440.3|2|1) FN267-S.SNP.1:27768285 chr01:027768285 0 W/27768285-27768285 FN267-S Single Base Substitution C-A INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN2337.SNP.1:27779687 chr01:027779687 0 W/27779687-27779687 FN2337 SNP T -> G AC=1;AN=192;BQB=0.666328;DP=4856;DP4=2478,2126,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08448e-09;MQSB=0.990609;RPB=0.813436;SGB=10.4835;VDB=0.347267;EFF=INTRON(MODIFIER||||271|LOC_Os01g48444|protein_coding|CODING|LOC_Os01g48444.1|3|1) FN2711-S.SNP.1:27781867 chr01:027781867 0 W/27781867-27781867 FN2711-S SNP C -> G AC=2;AN=200;BQB=0.13031;DP=4871;DP4=2448,2084,13,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.12168e-16;MQSB=0.944603;RPB=0.36039;SGB=90.7419;VDB=0.0135172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgC|W98C|290|LOC_Os01g48446|protein_coding|CODING|LOC_Os01g48446.1|1|1) FN984-S.SNP.1:27786064 chr01:027786064 0 W/27786064-27786064 FN984-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN680-S.SNP.1:27786502 chr01:027786502 0 W/27786502-27786502 FN680-S Single Base Substitution G-A INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN4234-S.SNP.1:27795284 chr01:027795284 0 W/27795284-27795284 FN4234-S SNP C -> T AC=2;AN=170;BQB=0.843452;DP=2417;DP4=1147,1208,10,9;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.14774e-06;MQSB=0.0199676;RPB=0.939316;SGB=55.5339;VDB=0.656876;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K717|1623|LOC_Os01g48490|protein_coding|CODING|LOC_Os01g48490.1|8|1) FN1284-S.SNP.1:27799307 chr01:027799307 0 W/27799307-27799307 FN1284-S Single Base Substitution C-A INTRON HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN793-S.SNP.1:27799765 chr01:027799765 0 W/27799765-27799765 FN793-S Single Base Substitution A-G INTRON HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN4083-S.SNP.1:27808060 chr01:027808060 0 W/27808060-27808060 FN4083-S SNP A -> T AC=2;AN=182;BQB=0.777064;DP=2569;DP4=1018,1333,15,23;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0.0112884;MQB=2.84866e-09;MQSB=0.3682;RPB=0.0558531;SGB=-4.11685;VDB=0.548254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.1:27808225 chr01:027808225 0 W/27808225-27808225 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.870659;DP=3291;DP4=1546,1646,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0224856;MQB=4.17165e-06;MQSB=5.14992e-05;RPB=0.411374;SGB=44.2207;VDB=0.181116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.1:27810291 chr01:027810291 0 W/27810291-27810291 FN3418-S SNP T -> A AC=2;AN=184;BQB=0.614307;DP=3291;DP4=1712,1455,13,9;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.0297782;MQB=0.616984;MQSB=3.48258e-26;RPB=0.999343;SGB=67.4439;VDB=0.691907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.1:27810451 chr01:027810451 0 W/27810451-27810451 FN3453-S SNP C -> T AC=2;AN=184;BQB=0.4494;DP=3430;DP4=2010,1305,24,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23542e-14;MQSB=0.783149;RPB=0.958502;SGB=76.2326;VDB=0.787525;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.1:27814705 chr01:027814705 0 W/27814705-27814705 W554-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1367-S.SNP.1:27820331 chr01:027820331 0 W/27820331-27820331 FN1367-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g48520 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1751-S.SNP.1:27822899 chr01:027822899 0 W/27822899-27822899 FN1751-S SNP G -> A AC=1;AN=188;BQB=0.882201;DP=4388;DP4=1979,2326,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000683683;MQB=4.10413e-05;MQSB=0.137366;RPB=0.999577;SGB=28.8977;VDB=0.215687;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.1:27823376 chr01:027823376 0 W/27823376-27823376 FN4172-S SNP C -> T AC=1;AN=170;BQB=0.693064;DP=5256;DP4=2101,3027,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.76439e-08;MQSB=0.99768;RPB=0.641542;SGB=74.528;VDB=0.336387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.1:27827336 chr01:027827336 0 W/27827336-27827336 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.990172;DP=3328;DP4=1676,1573,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.52034e-06;MQSB=0.981774;RPB=0.213874;SGB=44.4357;VDB=0.814039;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S73L|141|LOC_Os01g48525|protein_coding|CODING|LOC_Os01g48525.1|1|1) FN3993-S.SNP.1:27827584 chr01:027827584 0 W/27827584-27827584 FN3993-S SNP C -> T AC=2;AN=168;BQB=0.97677;DP=3081;DP4=1338,1611,10,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.5447e-16;MQSB=0.938225;RPB=0.951527;SGB=123.066;VDB=0.147641;EFF=UTR_3_PRIME(MODIFIER||40||141|LOC_Os01g48525|protein_coding|CODING|LOC_Os01g48525.1|1|1) FN3783-S.SNP.1:27828261 chr01:027828261 0 W/27828261-27828261 FN3783-S SNP C -> G AC=1;AN=190;BQB=0.486985;DP=2763;DP4=1384,1293,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.59292e-05;MQSB=0.704888;RPB=0.192785;SGB=13.4442;VDB=0.270781;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.1:27832972 chr01:027832972 0 W/27832972-27832972 FN1358-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN2767-S.SNP.1:27837219 chr01:027837219 0 W/27837219-27837219 FN2767-S SNP C -> A AC=1;AN=198;BQB=0.45969;DP=4282;DP4=2160,1875,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66093e-12;MQSB=0.959673;RPB=0.975774;SGB=-38.6649;VDB=0.522412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.1:27846954 chr01:027846954 0 W/27846954-27846954 FN3482-S SNP T -> A AC=2;AN=184;BQB=0.953645;DP=3318;DP4=1304,1823,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.41087e-20;MQSB=0.963157;RPB=0.916662;SGB=78.7544;VDB=0.583358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.1:27848673 chr01:027848673 0 W/27848673-27848673 FN2126-S SNP G -> A AC=1;AN=168;BQB=0.970205;DP=1959;DP4=488,1447,1,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14357e-05;MQSB=0.999983;RPB=0.423113;SGB=30.0193;VDB=0.426633;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I66|110|LOC_Os01g48560|protein_coding|CODING|LOC_Os01g48560.1|1|1) FN2595-S.SNP.1:27856179 chr01:027856179 0 W/27856179-27856179 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.588409;DP=3729;DP4=1645,1746,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000536337;MQB=9.53245e-07;MQSB=0.997657;RPB=0.961655;SGB=40.149;VDB=0.315657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.1:27860558 chr01:027860558 0 W/27860558-27860558 FN4093-S SNP A -> T AC=1;AN=182;BQB=0.975012;DP=2865;DP4=1229,1565,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.94546e-10;MQSB=0.991347;RPB=0.872379;SGB=66.6657;VDB=0.9842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E158V|493|LOC_Os01g48580|protein_coding|CODING|LOC_Os01g48580.1|4|1) FN1402-S.SNP.1:27863038 chr01:027863038 0 W/27863038-27863038 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3448-S.SNP.1:27867260 chr01:027867260 0 W/27867260-27867260 FN3448-S SNP G -> T AC=2;AN=184;BQB=0.729473;DP=2637;DP4=1295,1240,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.5517e-13;MQSB=0.0686185;RPB=0.127019;SGB=51.0148;VDB=0.470622;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.1:27873552 chr01:027873552 0 W/27873552-27873552 FN409-S Single Base Substitution G-A INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2119-S.SNP.1:27874268 chr01:027874268 0 W/27874268-27874268 FN2119-S SNP G -> A AC=2;AN=168;BQB=0.987824;DP=3973;DP4=1647,2256,20,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.41329e-23;MQSB=0.984293;RPB=0.815299;SGB=-152.015;VDB=0.980691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.1:27881457 chr01:027881457 0 W/27881457-27881457 FN2497 SNP C -> T AC=2;AN=200;BQB=0.446188;DP=4924;DP4=2586,2015,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000406174;MQB=1.23712e-15;MQSB=0.228271;RPB=0.994875;SGB=43.1985;VDB=0.313779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.1:27886366 chr01:027886366 0 W/27886366-27886366 FN3749-S SNP C -> T AC=2;AN=190;BQB=0.99957;DP=2280;DP4=1257,910,13,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.10728e-13;MQSB=0.99845;RPB=0.896936;SGB=99.1879;VDB=0.341685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.1:27891997 chr01:027891997 0 W/27891997-27891997 FN2464 SNP G -> A AC=1;AN=200;BQB=0.953753;DP=4058;DP4=1632,2095,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.61278e-08;MQSB=0.0110801;RPB=0.874936;SGB=36.6644;VDB=0.979007;EFF=INTRON(MODIFIER||||483|LOC_Os01g48650|protein_coding|CODING|LOC_Os01g48650.1|3|1) FN1438-S.SNP.1:27906078 chr01:027906078 0 W/27906078-27906078 FN1438-S Single Base Substitution G-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN445-S.SNP.1:27923323 chr01:027923323 0 W/27923323-27923323 FN445-S Single Base Substitution A-G INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN445-S.SNP.1:27923327 chr01:027923327 0 W/27923327-27923327 FN445-S Single Base Substitution C-G INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1265-S.SNP.1:27925054 chr01:027925054 0 W/27925054-27925054 FN1265-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1384-S.SNP.1:27934232 chr01:027934232 0 W/27934232-27934232 FN1384-S Single Base Substitution A-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3057-S.SNP.1:27938368 chr01:027938368 0 W/27938368-27938368 FN3057-S SNP C -> A AC=1;AN=184;BQB=0.892957;DP=3294;DP4=1512,1666,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94672e-09;MQSB=0.994713;RPB=0.0120465;SGB=62.3078;VDB=0.251061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.1:27947256 chr01:027947256 0 W/27947256-27947256 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.97342;DP=4262;DP4=1918,2105,6,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.91188e-11;MQSB=0.950855;RPB=0.999974;SGB=68.91;VDB=0.999446;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.1:27949322 chr01:027949322 0 W/27949322-27949322 FN975-S Single Base Substitution C-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN975-S.SNP.1:27949323 chr01:027949323 0 W/27949323-27949323 FN975-S Single Base Substitution T-G INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN-173.SNP.1:27951624 chr01:027951624 0 W/27951624-27951624 FN-173 Single Base Substitution T-C INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2449.SNP.1:27954736 chr01:027954736 0 W/27954736-27954736 FN2449 SNP G -> A AC=1;AN=200;BQB=0.911014;DP=4891;DP4=2252,2339,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.75902e-10;MQSB=0.789583;RPB=0.99987;SGB=81.8956;VDB=0.841695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.1:27961395 chr01:027961395 0 W/27961395-27961395 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.987519;DP=3929;DP4=1367,2294,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.095e-07;MQSB=0.999922;RPB=0.905963;SGB=39.2697;VDB=0.988462;EFF=UTR_3_PRIME(MODIFIER||83||316|LOC_Os01g48750|protein_coding|CODING|LOC_Os01g48750.1|1|1) FN483-S.SNP.1:27964519 chr01:027964519 0 W/27964519-27964519 FN483-S Single Base Substitution C-T INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2321.SNP.1:27967492 chr01:027967492 0 W/27967492-27967492 FN2321 SNP G -> T AC=2;AN=192;BQB=0.562752;DP=5032;DP4=2145,2532,27,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000198728;MQB=2.67193e-30;MQSB=0.927901;RPB=0.642347;SGB=-120.491;VDB=0.983525;EFF=INTRON(MODIFIER||||82|LOC_Os01g48770|protein_coding|CODING|LOC_Os01g48770.2|1|1) FN886-S.SNP.1:27976326 chr01:027976326 0 W/27976326-27976326 FN886-S Single Base Substitution A-G INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2545-S.SNP.1:27977518 chr01:027977518 0 W/27977518-27977518 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.487951;DP=3661;DP4=1542,1859,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=7.38926e-05;MQSB=0.303412;RPB=0.50502;SGB=32.9588;VDB=0.48173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.1:27978202 chr01:027978202 0 W/27978202-27978202 FN2650-S SNP A -> G AC=1;AN=200;BQB=0.299693;DP=4293;DP4=1855,2058,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14346e-09;MQSB=0.917243;RPB=0.97167;SGB=-62.495;VDB=0.154229;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E24G|158|LOC_Os01g48780|protein_coding|CODING|LOC_Os01g48780.1|1|1) FN1669-S.SNP.1:27979975 chr01:027979975 0 W/27979975-27979975 FN1669-S SNP G -> T AC=2;AN=188;BQB=0.373313;DP=3271;DP4=2284,924,22,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.44069e-17;MQSB=0.922911;RPB=0.603478;SGB=76.9421;VDB=0.134002;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.1:27981589 chr01:027981589 0 W/27981589-27981589 FN927-S Single Base Substitution A-G INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN793-S.SNP.1:27992380 chr01:027992380 0 W/27992380-27992380 FN793-S Single Base Substitution A-G INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN793-S.SNP.1:27992381 chr01:027992381 0 W/27992381-27992381 FN793-S Single Base Substitution A-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN793-S.SNP.1:27992382 chr01:027992382 0 W/27992382-27992382 FN793-S Single Base Substitution A-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1749-S.SNP.1:27999383 chr01:027999383 0 W/27999383-27999383 FN1749-S SNP A -> G AC=1;AN=188;BQB=0.0114859;DP=4116;DP4=1962,2116,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.78269e-07;MQSB=0.792858;RPB=0.482129;SGB=-36.9078;VDB=0.975021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.1:28000134 chr01:028000134 0 W/28000134-28000134 FN3823-S SNP T -> A AC=2;AN=190;BQB=0.865292;DP=2821;DP4=1368,1365,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.0974e-15;MQSB=0.999598;RPB=0.985068;SGB=126.511;VDB=0.483373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.1:28005399 chr01:028005399 0 W/28005399-28005399 FN2476 SNP A -> G AC=1;AN=200;BQB=0.486963;DP=4719;DP4=2235,2149,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89278e-11;MQSB=0.994208;RPB=0.281725;SGB=79.9264;VDB=0.453634;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.1:28014504 chr01:028014504 0 W/28014504-28014504 FN3363-S SNP A -> C AC=1;AN=184;BQB=0.997479;DP=3508;DP4=1813,1554,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16674e-11;MQSB=0.719379;RPB=0.84777;SGB=67.4439;VDB=0.255519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.1:28017598 chr01:028017598 0 W/28017598-28017598 FN2617-S SNP G -> T AC=2;AN=198;BQB=0.926374;DP=4484;DP4=1988,2213,23,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.78726e-28;MQSB=0.973172;RPB=0.625886;SGB=102.008;VDB=0.726031;EFF=UTR_3_PRIME(MODIFIER||604||352|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.3|3|1),INTRON(MODIFIER||||384|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.2|4|1) FN2617-S.SNP.1:28017600 chr01:028017600 0 W/28017600-28017600 FN2617-S SNP C -> G AC=2;AN=198;BQB=0.834905;DP=4464;DP4=2010,2196,23,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.99281e-28;MQSB=0.995479;RPB=0.715306;SGB=196.593;VDB=0.586668;EFF=UTR_3_PRIME(MODIFIER||602||352|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.3|3|1),INTRON(MODIFIER||||384|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.2|4|1) FN3627-S.SNP.1:28020990 chr01:028020990 0 W/28020990-28020990 FN3627-S SNP G -> T AC=1;AN=190;BQB=0.382916;DP=3172;DP4=1676,1341,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01098e-05;MQSB=0.318335;RPB=0.374034;SGB=21.1058;VDB=0.723817;EFF=INTRON(MODIFIER||||406|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.1|1|1),INTRON(MODIFIER||||384|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.2|1|1),INTRON(MODIFIER||||352|LOC_Os01g48830|protein_coding|CODING|LOC_Os01g48830.3|1|1) FN2581-S.SNP.1:28041950 chr01:028041950 0 W/28041950-28041950 FN2581-S SNP C -> T AC=2;AN=198;BQB=0.836715;DP=3571;DP4=1966,1443,16,7;HOB=0.019998;ICB=0.495001;MQ=26;MQ0F=0.25371;MQB=0.977164;MQSB=0.0498218;RPB=0.998619;SGB=72.5051;VDB=0.916745;EFF=INTRON(MODIFIER||||531|LOC_Os01g48874|protein_coding|CODING|LOC_Os01g48874.1|1|1) FN2617-S.SNP.1:28043747 chr01:028043747 0 W/28043747-28043747 FN2617-S SNP C -> A AC=1;AN=198;BQB=0.899094;DP=4068;DP4=1735,2064,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=15;MQ0F=0.410521;MQB=0.0225757;MQSB=1.10612e-12;RPB=0.177232;SGB=50.9344;VDB=0.103298;EFF=INTRON(MODIFIER||||531|LOC_Os01g48874|protein_coding|CODING|LOC_Os01g48874.1|1|1) FN633-S.SNP.1:28046849 chr01:028046849 0 W/28046849-28046849 FN633-S Single Base Substitution G-A INTRON HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN2692-S.SNP.1:28050462 chr01:028050462 0 W/28050462-28050462 FN2692-S SNP A -> G AC=2;AN=200;BQB=0.798505;DP=4565;DP4=2324,1920,31,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.91991e-30;MQSB=0.966803;RPB=0.936526;SGB=70.4864;VDB=0.272963;EFF=INTRON(MODIFIER||||531|LOC_Os01g48874|protein_coding|CODING|LOC_Os01g48874.1|1|1) FN772-S.SNP.1:28050646 chr01:028050646 0 W/28050646-28050646 FN772-S Single Base Substitution G-T INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2305.SNP.1:28052213 chr01:028052213 0 W/28052213-28052213 FN2305 SNP T -> A AC=1;AN=192;BQB=0.758691;DP=5244;DP4=2934,1986,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.93395e-17;MQSB=0.979199;RPB=0.897165;SGB=126.804;VDB=0.281207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.1:28056993 chr01:028056993 0 W/28056993-28056993 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.124472;DP=4068;DP4=1974,2039,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7682e-06;MQSB=0.922984;RPB=0.941863;SGB=-144.43;VDB=0.445006;EFF=START_GAINED(LOW||||395|LOC_Os01g48900|protein_coding|CODING|LOC_Os01g48900.1|6|1),UTR_5_PRIME(MODIFIER||505||395|LOC_Os01g48900|protein_coding|CODING|LOC_Os01g48900.1|6|1) FN1703-S.SNP.1:28056994 chr01:028056994 0 W/28056994-28056994 FN1703-S SNP T -> A AC=1;AN=188;BQB=0.395395;DP=4067;DP4=1946,2057,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2115e-06;MQSB=0.890749;RPB=0.735854;SGB=-58.9891;VDB=0.101616;EFF=UTR_5_PRIME(MODIFIER||504||395|LOC_Os01g48900|protein_coding|CODING|LOC_Os01g48900.1|6|1) FN2731-S.SNP.1:28057593 chr01:028057593 0 W/28057593-28057593 FN2731-S SNP T -> A AC=1;AN=200;BQB=0.931443;DP=4110;DP4=2101,1867,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.45861e-11;MQSB=0.990408;RPB=0.915756;SGB=34.6953;VDB=0.557786;EFF=INTRON(MODIFIER||||395|LOC_Os01g48900|protein_coding|CODING|LOC_Os01g48900.1|6|1) FN3394-S.SNP.1:28083900 chr01:028083900 0 W/28083900-28083900 FN3394-S SNP G -> A AC=2;AN=184;BQB=0.710351;DP=2925;DP4=1543,1268,25,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.28635e-13;MQSB=0.468213;RPB=0.189541;SGB=106.184;VDB=0.689811;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.1:28087828 chr01:028087828 0 W/28087828-28087828 FN2478 SNP A -> T AC=1;AN=200;BQB=0.529077;DP=4530;DP4=1910,2342,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08035e-08;MQSB=0.995603;RPB=0.581629;SGB=36.6644;VDB=0.0907685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1310-S.SNP.1:28090290 chr01:028090290 0 W/28090290-28090290 FN1310-S Single Base Substitution C-T INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2469.SNP.1:28094336 chr01:028094336 0 W/28094336-28094336 FN2469 SNP T -> A AC=1;AN=200;BQB=0.800576;DP=4706;DP4=2248,2193,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.99882e-10;MQSB=0.990929;RPB=0.279599;SGB=58.2954;VDB=0.619577;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V1605|2167|LOC_Os01g48960|protein_coding|CODING|LOC_Os01g48960.1|17|1) FN_955-1.SNP.1:28095850 chr01:028095850 0 W/28095850-28095850 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2210-S.SNP.1:28099180 chr01:028099180 0 W/28099180-28099180 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.999574;DP=5025;DP4=2050,2650,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199005;MQB=1.03764e-10;MQSB=0.400696;RPB=0.01952;SGB=10.3266;VDB=0.253811;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G446|2167|LOC_Os01g48960|protein_coding|CODING|LOC_Os01g48960.1|11|1) FN1728-S.SNP.1:28107703 chr01:028107703 0 W/28107703-28107703 FN1728-S SNP T -> A AC=1;AN=188;BQB=0.594477;DP=3579;DP4=1704,1853,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04286e-06;MQSB=0.999155;RPB=0.998566;SGB=-15.5431;VDB=0.487615;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.1:28107741 chr01:028107741 0 W/28107741-28107741 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.727409;DP=3573;DP4=1852,1688,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.05847e-07;MQSB=0.973787;RPB=0.920081;SGB=32.441;VDB=0.881069;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.1:28110045 chr01:028110045 0 W/28110045-28110045 FN491-S Single Base Substitution C-A INTRON HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2494.SNP.1:28111588 chr01:028111588 0 W/28111588-28111588 FN2494 SNP A -> G AC=1;AN=200;BQB=0.392307;DP=4761;DP4=2156,2297,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31121e-16;MQSB=0.972974;RPB=0.819974;SGB=105.163;VDB=0.141331;EFF=INTRON(MODIFIER||||93|LOC_Os01g48970|protein_coding|CODING|LOC_Os01g48970.1|1|1) FN3421-S.SNP.1:28115448 chr01:028115448 0 W/28115448-28115448 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.995571;DP=2704;DP4=1260,1328,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.81306e-07;MQSB=0.996359;RPB=0.76136;SGB=53.2642;VDB=0.821212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.1:28116920 chr01:028116920 0 W/28116920-28116920 FN2713-S SNP A -> T AC=2;AN=200;BQB=0.991158;DP=5071;DP4=2129,2643,30,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.92203e-36;MQSB=0.882966;RPB=0.0913725;SGB=15.9379;VDB=0.000904969;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.1:28121981 chr01:028121981 0 W/28121981-28121981 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN-277.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN-277 Single Base Substitution G-A INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-361.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN-361 Single Base Substitution G-A INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN1216-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN1216-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1563-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN1563-S Single Base Substitution G-A INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1742-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN1742-S SNP G -> A AC=2;AN=188;BQB=0.593106;DP=4243;DP4=2096,2076,21,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.05936e-27;MQSB=0.167218;RPB=0.672898;SGB=-111.43;VDB=0.918483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN2473 SNP G -> A AC=2;AN=200;BQB=0.994966;DP=5065;DP4=2419,2253,19,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.28025e-15;MQSB=0.990764;RPB=0.935205;SGB=30.3571;VDB=0.969082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN3332-S SNP G -> A AC=2;AN=184;BQB=0.915795;DP=3260;DP4=1386,1731,15,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.24254e-19;MQSB=0.998264;RPB=0.759393;SGB=123.793;VDB=0.835358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.569605;DP=3222;DP4=1443,1649,12,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.22043e-15;MQSB=0.99732;RPB=0.998592;SGB=67.0756;VDB=0.654021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN3923-S SNP G -> A AC=2;AN=158;BQB=0.938249;DP=2669;DP4=1221,1353,12,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.65141e-14;MQSB=0.971485;RPB=0.565028;SGB=42.7743;VDB=0.521429;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN561-S Single Base Substitution G-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN721-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN721-S Single Base Substitution G-A INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN960-S.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN960-S Single Base Substitution G-A INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN_826-4-1.SNP.1:28124056 chr01:028124056 0 W/28124056-28124056 FN_826-4-1 Single Base Substitution G-A HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN447-S.SNP.1:28124785 chr01:028124785 0 W/28124785-28124785 FN447-S Single Base Substitution C-A INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN782-S.SNP.1:28129773 chr01:028129773 0 W/28129773-28129773 FN782-S Single Base Substitution C-T INTRON HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN964-S.SNP.1:28131148 chr01:028131148 0 W/28131148-28131148 FN964-S Single Base Substitution G-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3448-S.SNP.1:28137802 chr01:028137802 0 W/28137802-28137802 FN3448-S SNP A -> T AC=2;AN=184;BQB=0.891803;DP=2541;DP4=1216,1182,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76949e-09;MQSB=0.927282;RPB=0.879669;SGB=60.4004;VDB=0.411374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K168I|519|LOC_Os01g49000|protein_coding|CODING|LOC_Os01g49000.1|2|1) FN-313.SNP.1:28149236 chr01:028149236 0 W/28149236-28149236 FN-313 Single Base Substitution G-A INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN3841-S.SNP.1:28149262 chr01:028149262 0 W/28149262-28149262 FN3841-S SNP G -> T AC=1;AN=190;BQB=0.99085;DP=2700;DP4=1433,1185,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.91426e-05;MQSB=0.998918;RPB=0.996917;SGB=35.4339;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.1:28151786 chr01:028151786 0 W/28151786-28151786 FN1452-S Single Base Substitution G-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN722-S.SNP.1:28152347 chr01:028152347 0 W/28152347-28152347 FN722-S Single Base Substitution G-A INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN4075-S.SNP.1:28152544 chr01:028152544 0 W/28152544-28152544 FN4075-S SNP A -> T AC=2;AN=182;BQB=0.74936;DP=2566;DP4=1535,968,12,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.59924e-09;MQSB=0.98761;RPB=0.646006;SGB=46.1603;VDB=0.474717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.1:28157171 chr01:028157171 0 W/28157171-28157171 FN1421-S Single Base Substitution T-C INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3521-S.SNP.1:28158877 chr01:028158877 0 W/28158877-28158877 FN3521-S SNP G -> T AC=1;AN=188;BQB=0.987095;DP=3113;DP4=1752,1209,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000321234;MQB=8.21401e-05;MQSB=0.904085;RPB=0.558841;SGB=35.3493;VDB=0.880537;EFF=INTERGENIC(MODIFIER||||||||||1) 705-7.SNP.1:28160300 chr01:028160300 0 W/28160300-28160300 705-7 Single Base Substitution G-A INTERGENIC Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN395-S.SNP.1:28169762 chr01:028169762 0 W/28169762-28169762 FN395-S Single Base Substitution T-C INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3373-S.SNP.1:28174436 chr01:028174436 0 W/28174436-28174436 FN3373-S SNP T -> C AC=1;AN=184;BQB=0.830334;DP=2256;DP4=1459,709,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.41877e-07;MQSB=0.99822;RPB=0.412454;SGB=32.2261;VDB=0.809805;EFF=INTRON(MODIFIER||||113|LOC_Os01g49026|protein_coding|CODING|LOC_Os01g49026.1|1|1),INTRON(MODIFIER||||106|LOC_Os01g49026|protein_coding|CODING|LOC_Os01g49026.2|1|1),INTRON(MODIFIER||||106|LOC_Os01g49026|protein_coding|CODING|LOC_Os01g49026.3|1|1) FN2138-S.SNP.1:28177824 chr01:028177824 0 W/28177824-28177824 FN2138-S SNP C -> T AC=1;AN=168;BQB=0.0244198;DP=2663;DP4=1470,1161,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.83078e-05;MQSB=0.998888;RPB=0.721476;SGB=-80.0779;VDB=0.709092;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.1:28182943 chr01:028182943 0 W/28182943-28182943 W554-1-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2554-S.SNP.1:28187548 chr01:028187548 0 W/28187548-28187548 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.990089;DP=4191;DP4=1924,2066,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.93346e-06;MQSB=0.994782;RPB=0.818554;SGB=29.3637;VDB=0.829708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.1:28194448 chr01:028194448 0 W/28194448-28194448 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.584199;DP=2793;DP4=1180,1499,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.93822e-09;MQSB=0.968932;RPB=0.63988;SGB=60.7873;VDB=0.34008;EFF=UTR_3_PRIME(MODIFIER||1754||113|LOC_Os01g49065|protein_coding|CODING|LOC_Os01g49065.1|1|1) FN2399.SNP.1:28194750 chr01:028194750 0 W/28194750-28194750 FN2399 SNP T -> C AC=1;AN=200;BQB=0.470716;DP=4788;DP4=2243,2199,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59773e-09;MQSB=0.513463;RPB=0.894551;SGB=51.0851;VDB=0.326204;EFF=UTR_3_PRIME(MODIFIER||1452||113|LOC_Os01g49065|protein_coding|CODING|LOC_Os01g49065.1|1|1) FN2149-S.SNP.1:28201808 chr01:028201808 0 W/28201808-28201808 FN2149-S SNP T -> G AC=1;AN=168;BQB=5.39659e-05;DP=3786;DP4=1752,1928,16,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.55135e-07;MQSB=0.204996;RPB=0.96311;SGB=-346.155;VDB=0.731321;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.1:28202832 chr01:028202832 0 W/28202832-28202832 FN4070-S SNP G -> A AC=1;AN=182;BQB=0.824787;DP=2976;DP4=1417,1501,16,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.28305e-11;MQSB=0.998237;RPB=0.780224;SGB=67.2255;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.1:28205897 chr01:028205897 0 W/28205897-28205897 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1200-S.SNP.1:28205993 chr01:028205993 0 W/28205993-28205993 FN1200-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN544-S.SNP.1:28215409 chr01:028215409 0 W/28215409-28215409 FN544-S Single Base Substitution G-A INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2178-S.SNP.1:28215564 chr01:028215564 0 W/28215564-28215564 FN2178-S SNP T -> A AC=1;AN=168;BQB=5.16003e-08;DP=3662;DP4=1905,1715,20,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.96487e-08;MQSB=0.97521;RPB=0.997107;SGB=-227.89;VDB=0.877355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.1:28222985 chr01:028222985 0 W/28222985-28222985 FN2680-S SNP C -> A AC=1;AN=200;BQB=0.851062;DP=4715;DP4=2284,2156,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212089;MQB=2.31526e-07;MQSB=0.909725;RPB=0.42926;SGB=29.4541;VDB=0.118261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.1:28224398 chr01:028224398 0 W/28224398-28224398 FN1749-S SNP T -> G AC=1;AN=188;BQB=0.723027;DP=1017;DP4=268,628,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00294985;MQB=0.0301344;MQSB=9.59637e-41;RPB=0.890949;SGB=-33.2542;VDB=0.0119695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.1:28234171 chr01:028234171 0 W/28234171-28234171 FN2388 SNP C -> A AC=1;AN=200;BQB=0.991247;DP=4738;DP4=2266,2192,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.26732e-11;MQSB=0.725056;RPB=0.737398;SGB=72.6852;VDB=0.573615;EFF=UTR_3_PRIME(MODIFIER||57||261|LOC_Os01g49110|protein_coding|CODING|LOC_Os01g49110.2|8|1),UTR_3_PRIME(MODIFIER||57||261|LOC_Os01g49110|protein_coding|CODING|LOC_Os01g49110.1|8|1) FN1651-S.SNP.1:28237059 chr01:028237059 0 W/28237059-28237059 FN1651-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g49120 MATE efflux family protein, putative, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN894-S.SNP.1:28237369 chr01:028237369 0 W/28237369-28237369 FN894-S Single Base Substitution C-T INTRON HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1680-S.SNP.1:28238740 chr01:028238740 0 W/28238740-28238740 FN1680-S SNP C -> T AC=1;AN=188;BQB=0.572003;DP=3111;DP4=1951,1120,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.98006e-09;MQSB=0.858794;RPB=0.709416;SGB=-69.186;VDB=0.936189;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.1:28239815 chr01:028239815 0 W/28239815-28239815 W423-5-1 Single Base Substitution T-G INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN4138-S.SNP.1:28248484 chr01:028248484 0 W/28248484-28248484 FN4138-S SNP T -> C AC=1;AN=170;BQB=0.943617;DP=2359;DP4=1212,1064,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.49783e-06;MQSB=0.897929;RPB=0.0429455;SGB=34.5445;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.1:28253484 chr01:028253484 0 W/28253484-28253484 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.709331;DP=3793;DP4=1702,2043,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.89988e-08;MQSB=0.85219;RPB=0.657698;SGB=-39.1914;VDB=0.726722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.1:28254768 chr01:028254768 0 W/28254768-28254768 FN1300-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2456.SNP.1:28254768 chr01:028254768 0 W/28254768-28254768 FN2456 SNP C -> G AC=1;AN=200;BQB=0.998823;DP=4640;DP4=2252,1812,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.24024e-05;MQSB=0.628326;RPB=0.21953;SGB=8.64371;VDB=0.0337118;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.1:28255900 chr01:028255900 0 W/28255900-28255900 FN1731-S SNP T -> A AC=1;AN=188;BQB=0.569822;DP=3860;DP4=1684,2096,7,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.13359e-12;MQSB=0.882428;RPB=0.98051;SGB=-7.93693;VDB=0.041791;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.1:28262377 chr01:028262377 0 W/28262377-28262377 FN-93 Single Base Substitution A-C INTRON HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3528-S.SNP.1:28274337 chr01:028274337 0 W/28274337-28274337 FN3528-S SNP T -> A AC=1;AN=188;BQB=0.677535;DP=2676;DP4=1207,1382,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.58874e-11;MQSB=0.729995;RPB=0.406508;SGB=50.1574;VDB=0.589287;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.1:28275682 chr01:028275682 0 W/28275682-28275682 FN952-S Single Base Substitution G-A INTERGENIC HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN952-S.SNP.1:28275683 chr01:028275683 0 W/28275683-28275683 FN952-S Single Base Substitution G-A INTERGENIC HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN952-S.SNP.1:28275684 chr01:028275684 0 W/28275684-28275684 FN952-S Single Base Substitution G-A INTERGENIC HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1035-S.SNP.1:28276462 chr01:028276462 0 W/28276462-28276462 FN1035-S Single Base Substitution G-A INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-245.SNP.1:28287880 chr01:028287880 0 W/28287880-28287880 FN-245 Single Base Substitution C-T INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1330-S.SNP.1:28293640 chr01:028293640 0 W/28293640-28293640 FN1330-S Single Base Substitution C-A INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2407.SNP.1:28305639 chr01:028305639 0 W/28305639-28305639 FN2407 SNP G -> A AC=2;AN=200;BQB=0.996773;DP=4769;DP4=2232,2207,25,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000209688;MQB=3.05219e-24;MQSB=0.355743;RPB=0.461093;SGB=206.235;VDB=0.251431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.1:28310334 chr01:028310334 0 W/28310334-28310334 FN2191-S SNP G -> T AC=1;AN=190;BQB=0.726181;DP=4272;DP4=2078,1967,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.44912e-13;MQSB=0.951114;RPB=0.695818;SGB=44.0907;VDB=0.185604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.1:28312977 chr01:028312977 0 W/28312977-28312977 FN2578-S SNP G -> T AC=1;AN=198;BQB=0.921695;DP=4316;DP4=1908,2203,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65776e-05;MQSB=0.906699;RPB=0.154834;SGB=31.1689;VDB=0.566336;EFF=INTRON(MODIFIER||||423|LOC_Os01g49250|protein_coding|CODING|LOC_Os01g49250.1|2|1) FN-81.SNP.1:28317517 chr01:028317517 0 W/28317517-28317517 FN-81 Single Base Substitution G-C INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN3507-S.SNP.1:28317533 chr01:028317533 0 W/28317533-28317533 FN3507-S SNP T -> C AC=1;AN=188;BQB=0.999393;DP=2856;DP4=1430,1377,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.66748e-05;MQSB=0.961091;RPB=0.951612;SGB=30.8063;VDB=0.0372201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.1:28324141 chr01:028324141 0 W/28324141-28324141 FN-192 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN3675-S.SNP.1:28330250 chr01:028330250 0 W/28330250-28330250 FN3675-S SNP G -> A AC=2;AN=190;BQB=0.742327;DP=2795;DP4=1363,1301,10,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.84788e-10;MQSB=0.911593;RPB=0.964084;SGB=50.3161;VDB=0.0541302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.1:28333791 chr01:028333791 0 W/28333791-28333791 FN1750-S SNP A -> G AC=2;AN=188;BQB=0.348601;DP=2062;DP4=615,1400,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01642e-09;MQSB=0.204087;RPB=0.63771;SGB=-69.186;VDB=0.114776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.1:28333812 chr01:028333812 0 W/28333812-28333812 FN1353-S Single Base Substitution G-A INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1046-S.SNP.1:28334529 chr01:028334529 0 W/28334529-28334529 FN1046-S Single Base Substitution A-T INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN-33.SNP.1:28335535 chr01:028335535 0 W/28335535-28335535 FN-33 Single Base Substitution C-T INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN-33.SNP.1:28335553 chr01:028335553 0 W/28335553-28335553 FN-33 Single Base Substitution C-T INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN2244-S.SNP.1:28337541 chr01:028337541 0 W/28337541-28337541 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.806178;DP=3385;DP4=1524,1552,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37974e-05;MQSB=0.443765;RPB=0.880108;SGB=35.4339;VDB=0.191968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.1:28348035 chr01:028348035 0 W/28348035-28348035 FN2556-S SNP G -> T AC=1;AN=198;BQB=0.862019;DP=4308;DP4=2005,2067,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.58477e-17;MQSB=0.977579;RPB=0.984852;SGB=136.856;VDB=0.296121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M106I|764|LOC_Os01g49310|protein_coding|CODING|LOC_Os01g49310.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M106I|764|LOC_Os01g49310|protein_coding|CODING|LOC_Os01g49310.2|2|1) FN438-S.SNP.1:28351078 chr01:028351078 0 W/28351078-28351078 FN438-S Single Base Substitution C-A INTERGENIC HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN714-S.SNP.1:28353565 chr01:028353565 0 W/28353565-28353565 FN714-S Single Base Substitution C-T INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1300-S.SNP.1:28362070 chr01:028362070 0 W/28362070-28362070 FN1300-S Single Base Substitution A-G INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN483-S.SNP.1:28363305 chr01:028363305 0 W/28363305-28363305 FN483-S Single Base Substitution G-A INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3432-S.SNP.1:28378703 chr01:028378703 0 W/28378703-28378703 FN3432-S SNP A -> G AC=1;AN=184;BQB=0.999974;DP=2698;DP4=1316,1206,12,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.80114e-13;MQSB=0.993356;RPB=0.307325;SGB=81.5311;VDB=0.978976;EFF=INTRON(MODIFIER||||592|LOC_Os01g49360|protein_coding|CODING|LOC_Os01g49360.1|1|1) FN831-S.SNP.1:28396307 chr01:028396307 0 W/28396307-28396307 FN831-S Single Base Substitution G-T INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN406-S.SNP.1:28399913 chr01:028399913 0 W/28399913-28399913 FN406-S Single Base Substitution C-T INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN2639-S.SNP.1:28406960 chr01:028406960 0 W/28406960-28406960 FN2639-S SNP T -> C AC=1;AN=200;BQB=0.492565;DP=4980;DP4=2495,2238,5,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47196e-13;MQSB=0.937445;RPB=0.831456;SGB=91.1059;VDB=0.546167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.1:28414298 chr01:028414298 0 W/28414298-28414298 FN1009-S Single Base Substitution G-A INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1009-S.SNP.1:28414299 chr01:028414299 0 W/28414299-28414299 FN1009-S Single Base Substitution T-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1009-S.SNP.1:28414302 chr01:028414302 0 W/28414302-28414302 FN1009-S Single Base Substitution A-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1036-S.SNP.1:28425161 chr01:028425161 0 W/28425161-28425161 FN1036-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os01g49420 retrotransposon protein, putative, unclassified, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN514-S.SNP.1:28432520 chr01:028432520 0 W/28432520-28432520 FN514-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g49440 expressed protein SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2478.SNP.1:28436562 chr01:028436562 0 W/28436562-28436562 FN2478 SNP C -> G AC=1;AN=200;BQB=0.460008;DP=5017;DP4=2422,2277,18,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00438509;MQB=6.15604e-09;MQSB=9.26588e-07;RPB=0.117964;SGB=-5.84819;VDB=0.837792;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.1:28436978 chr01:028436978 0 W/28436978-28436978 FN588-S Single Base Substitution C-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2362.SNP.1:28444933 chr01:028444933 0 W/28444933-28444933 FN2362 SNP G -> C AC=1;AN=192;BQB=0.237587;DP=4623;DP4=2220,2053,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.03355e-09;MQSB=0.997958;RPB=0.55939;SGB=15.1765;VDB=0.707516;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtC|V147|151|LOC_Os01g49460|protein_coding|CODING|LOC_Os01g49460.1|1|1) FN4314-S.SNP.1:28445869 chr01:028445869 0 W/28445869-28445869 FN4314-S SNP A -> G AC=1;AN=170;BQB=0.925295;DP=2279;DP4=1221,967,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.20488e-09;MQSB=0.863761;RPB=0.116207;SGB=61.2001;VDB=0.0449621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.1:28448195 chr01:028448195 0 W/28448195-28448195 FN2360 SNP G -> T AC=2;AN=192;BQB=0.860703;DP=5229;DP4=2594,2320,24,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.80856e-23;MQSB=0.994072;RPB=0.902333;SGB=-47.5261;VDB=0.0305905;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I1225|1236|LOC_Os01g49470|protein_coding|CODING|LOC_Os01g49470.1|14|1),UTR_3_PRIME(MODIFIER||85||1222|LOC_Os01g49470|protein_coding|CODING|LOC_Os01g49470.2|13|1) FN-400.SNP.1:28462357 chr01:028462357 0 W/28462357-28462357 FN-400 Single Base Substitution C-T INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.1:28462357 chr01:028462357 0 W/28462357-28462357 FN400-S Single Base Substitution C-T INTERGENIC HOMO SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN934-S.SNP.1:28463737 chr01:028463737 0 W/28463737-28463737 FN934-S Single Base Substitution T-C INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1650-S.SNP.1:28470221 chr01:028470221 0 W/28470221-28470221 FN1650-S Single Base Substitution C-T INTRON HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3331-S.SNP.1:28471367 chr01:028471367 0 W/28471367-28471367 FN3331-S SNP T -> C AC=1;AN=184;BQB=0.972321;DP=3320;DP4=1282,1898,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74718e-05;MQSB=0.887596;RPB=0.993926;SGB=39.699;VDB=0.602433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.1:28475146 chr01:028475146 0 W/28475146-28475146 FN-363 Single Base Substitution T-G INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1529-S.SNP.1:28477033 chr01:028477033 0 W/28477033-28477033 FN1529-S Single Base Substitution C-T STOP_GAINED HET LOC_Os01g49500 retrotransposon protein, putative, unclassified SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. W360-2S-2.SNP.1:28480691 chr01:028480691 0 W/28480691-28480691 W360-2S-2 Single Base Substitution T-G INTRON HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. W360-2S-2.SNP.1:28480692 chr01:028480692 0 W/28480692-28480692 W360-2S-2 Single Base Substitution A-T INTRON HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3529-S.SNP.1:28494483 chr01:028494483 0 W/28494483-28494483 FN3529-S SNP A -> G AC=1;AN=188;BQB=0.917838;DP=2841;DP4=1357,1389,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.92398e-08;MQSB=0.90066;RPB=0.995785;SGB=43.0708;VDB=0.841529;EFF=INTRON(MODIFIER||||701|LOC_Os01g49529|protein_coding|CODING|LOC_Os01g49529.1|1|1) FN3323-S.SNP.1:28494884 chr01:028494884 0 W/28494884-28494884 FN3323-S SNP G -> T AC=1;AN=184;BQB=0.58976;DP=2566;DP4=1133,1193,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000322176;MQSB=0.847252;RPB=0.814317;SGB=48.7425;VDB=0.681875;EFF=INTRON(MODIFIER||||701|LOC_Os01g49529|protein_coding|CODING|LOC_Os01g49529.1|1|1) FN4082-S.SNP.1:28506814 chr01:028506814 0 W/28506814-28506814 FN4082-S SNP C -> T AC=2;AN=182;BQB=0.741692;DP=3187;DP4=1539,1536,8,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.9545e-13;MQSB=0.951818;RPB=0.610059;SGB=116.285;VDB=0.436799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:28508715 chr01:028508715 0 W/28508715-28508715 FN3500-S SNP T -> A AC=2;AN=188;BQB=0.747835;DP=3251;DP4=1493,1636,14,20;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00492156;MQB=0.340481;MQSB=0.716758;RPB=0.99532;SGB=148.931;VDB=0.75689;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.1:28508916 chr01:028508916 0 W/28508916-28508916 FN355-S Single Base Substitution C-A INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN-222.SNP.1:28510210 chr01:028510210 0 W/28510210-28510210 FN-222 Single Base Substitution T-C INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3697-S.SNP.1:28520114 chr01:028520114 0 W/28520114-28520114 FN3697-S SNP G -> C AC=1;AN=190;BQB=0.583544;DP=3063;DP4=1481,1489,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53988e-09;MQSB=0.506761;RPB=0.794908;SGB=21.1058;VDB=0.889304;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.1:28521005 chr01:028521005 0 W/28521005-28521005 FN1112-S Single Base Substitution C-G INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2432.SNP.1:28531129 chr01:028531129 0 W/28531129-28531129 FN2432 SNP C -> T AC=1;AN=200;BQB=0.428585;DP=4836;DP4=2542,2074,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53178e-07;MQSB=0.102043;RPB=0.92935;SGB=45.0543;VDB=0.494762;EFF=INTRON(MODIFIER||||666|LOC_Os01g49614|protein_coding|CODING|LOC_Os01g49614.1|1|1),INTRON(MODIFIER||||346|LOC_Os01g49614|protein_coding|CODING|LOC_Os01g49614.3|1|1) FN584-S.SNP.1:28552885 chr01:028552885 0 W/28552885-28552885 FN584-S Single Base Substitution G-A INTRON HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3309-S.SNP.1:28554953 chr01:028554953 0 W/28554953-28554953 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.999952;DP=3127;DP4=1301,1747,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.3509e-12;MQSB=0.926471;RPB=0.999987;SGB=84.9167;VDB=0.663901;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.1:28558870 chr01:028558870 0 W/28558870-28558870 FN1749-S SNP C -> A AC=1;AN=188;BQB=0.196688;DP=4249;DP4=2269,1932,17,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.13888e-14;MQSB=0.999743;RPB=0.63361;SGB=-120.834;VDB=0.333836;EFF=INTRON(MODIFIER||||303|LOC_Os01g49690|protein_coding|CODING|LOC_Os01g49690.1|6|1) FN2579-S.SNP.1:28561279 chr01:028561279 0 W/28561279-28561279 FN2579-S SNP T -> A AC=1;AN=198;BQB=0.747848;DP=4283;DP4=2052,2017,22,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.06204e-22;MQSB=0.999511;RPB=0.997706;SGB=122.837;VDB=0.304052;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN-167 Single Base Substitution A-T INTERGENIC HOMO SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-25.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN-25 Single Base Substitution A-T INTERGENIC Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN-295.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN-295 Single Base Substitution A-T INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1623-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN1623-S Single Base Substitution A-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2113-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN2113-S SNP A -> T AC=1;AN=168;BQB=0.0159028;DP=2485;DP4=1443,964,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0156848;MQSB=0.987675;RPB=0.770116;SGB=-72.3703;VDB=0.582439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN2707-S SNP A -> T AC=2;AN=200;BQB=0.379981;DP=4502;DP4=2225,2039,9,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000222124;MQB=4.25346e-14;MQSB=0.786012;RPB=0.99186;SGB=52.9314;VDB=0.739652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN3906-S SNP A -> T AC=2;AN=158;BQB=0.998456;DP=2573;DP4=1409,970,13,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.13855e-10;MQSB=0.689105;RPB=0.960879;SGB=8.93339;VDB=0.592253;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN456-S Single Base Substitution A-T INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN591-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN591-S Single Base Substitution A-T INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN837-S Single Base Substitution A-T INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN947-S.SNP.1:28566540 chr01:028566540 0 W/28566540-28566540 FN947-S Single Base Substitution A-T INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN-133.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN-133 Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-338.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN-338 Single Base Substitution T-C UTR_3_PRIME HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2172-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN2172-S SNP T -> C AC=2;AN=168;BQB=0.0939079;DP=2889;DP4=997,1830,9,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.59651e-15;MQSB=0.938945;RPB=0.763132;SGB=-8.47945;VDB=0.00689462;EFF=UTR_3_PRIME(MODIFIER||339||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN230-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN230-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2680-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN2680-S SNP T -> C AC=1;AN=200;BQB=0.974019;DP=5043;DP4=2262,2493,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4598e-19;MQSB=0.938248;RPB=0.977171;SGB=137.158;VDB=0.351303;EFF=UTR_3_PRIME(MODIFIER||339||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN3400-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN3400-S SNP T -> C AC=1;AN=184;BQB=0.932704;DP=3088;DP4=1399,1539,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.36175e-09;MQSB=0.97847;RPB=0.976217;SGB=46.3132;VDB=0.172461;EFF=UTR_3_PRIME(MODIFIER||339||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN3890-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN3890-S SNP T -> C AC=2;AN=158;BQB=0.96399;DP=2545;DP4=1112,1271,15,31;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.0933e-25;MQSB=0.94142;RPB=0.743126;SGB=190.29;VDB=0.133379;EFF=UTR_3_PRIME(MODIFIER||339||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN4077-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN4077-S SNP T -> C AC=2;AN=182;BQB=0.695322;DP=2961;DP4=1334,1488,12,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.30952e-12;MQSB=0.944192;RPB=0.989076;SGB=84.7797;VDB=0.456677;EFF=UTR_3_PRIME(MODIFIER||339||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN713-S.SNP.1:28575831 chr01:028575831 0 W/28575831-28575831 FN713-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2666-S.SNP.1:28575834 chr01:028575834 0 W/28575834-28575834 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.80764;DP=5089;DP4=2307,2409,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.79084e-18;MQSB=0.82445;RPB=0.814026;SGB=137.158;VDB=0.929556;EFF=UTR_3_PRIME(MODIFIER||336||142|LOC_Os01g49750|protein_coding|CODING|LOC_Os01g49750.1|1|1) FN1410-S.SNP.1:28578344 chr01:028578344 0 W/28578344-28578344 FN1410-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1353-S.SNP.1:28587089 chr01:028587089 0 W/28587089-28587089 FN1353-S Single Base Substitution A-C INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2218-S.SNP.1:28587182 chr01:028587182 0 W/28587182-28587182 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.510267;DP=3718;DP4=1899,1408,17,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.17865e-13;MQSB=4.80276e-05;RPB=0.684635;SGB=89.4087;VDB=0.898516;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.1:28595451 chr01:028595451 0 W/28595451-28595451 FN_N1-119-1 Single Base Substitution A-G HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3765-S.SNP.1:28599146 chr01:028599146 0 W/28599146-28599146 FN3765-S SNP C -> A AC=2;AN=190;BQB=0.79247;DP=3062;DP4=1264,1633,17,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.1928e-19;MQSB=0.705266;RPB=0.975817;SGB=33.6348;VDB=0.590451;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.1:28601976 chr01:028601976 0 W/28601976-28601976 FN2285 SNP G -> A AC=2;AN=192;BQB=0.871984;DP=4135;DP4=1941,1927,11,15;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=3.80246e-11;MQSB=2.13195e-07;RPB=0.188192;SGB=113.111;VDB=0.485021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.1:28610361 chr01:028610361 0 W/28610361-28610361 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.861869;DP=2431;DP4=1101,1260,14,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.56848e-14;MQSB=0.997469;RPB=0.113183;SGB=116.978;VDB=0.681928;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.1:28610688 chr01:028610688 0 W/28610688-28610688 FN806-S Single Base Substitution T-A INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN806-S.SNP.1:28610690 chr01:028610690 0 W/28610690-28610690 FN806-S Single Base Substitution T-C INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN-222.SNP.1:28611426 chr01:028611426 0 W/28611426-28611426 FN-222 Single Base Substitution G-T INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-222.SNP.1:28611427 chr01:028611427 0 W/28611427-28611427 FN-222 Single Base Substitution C-T INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2499.SNP.1:28614357 chr01:028614357 0 W/28614357-28614357 FN2499 SNP G -> A AC=1;AN=200;BQB=0.999768;DP=4925;DP4=2228,2336,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000406091;MQB=7.66553e-08;MQSB=0.98661;RPB=0.945959;SGB=49.6594;VDB=0.407317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.1:28623887 chr01:028623887 0 W/28623887-28623887 FN3056-S SNP G -> A AC=1;AN=184;BQB=0.858661;DP=2530;DP4=1012,1399,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.54136e-06;MQSB=0.387413;RPB=0.415852;SGB=28.7043;VDB=0.164715;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-2.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 N1-169-2 Single Base Substitution A-T INTERGENIC Homo SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 N1-169-3 Single Base Substitution A-T INTERGENIC HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 N1-169-4 Single Base Substitution A-T INTERGENIC HET SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 N1-169-5 Single Base Substitution A-T INTERGENIC Homo SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-9.SNP.1:28624542 chr01:028624542 0 W/28624542-28624542 N1-169-9 Single Base Substitution A-T INTERGENIC HET SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN2709-S.SNP.1:28637786 chr01:028637786 0 W/28637786-28637786 FN2709-S SNP C -> T AC=2;AN=200;BQB=0.293311;DP=4730;DP4=2483,2007,24,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000211416;MQB=7.14707e-21;MQSB=0.920353;RPB=0.988955;SGB=81.5883;VDB=0.672303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.1:28641388 chr01:028641388 0 W/28641388-28641388 FN2442 SNP G -> A AC=1;AN=200;BQB=0.652084;DP=5144;DP4=2812,2107,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.05689e-07;MQSB=0.608574;RPB=0.679397;SGB=29.4541;VDB=0.868938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.1:28643025 chr01:028643025 0 W/28643025-28643025 FN2584-S SNP T -> A AC=2;AN=198;BQB=0.767268;DP=3584;DP4=1823,1467,22,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.65486e-22;MQSB=0.34479;RPB=0.815541;SGB=15.4077;VDB=0.497346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.1:28645403 chr01:028645403 0 W/28645403-28645403 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.711174;DP=4410;DP4=2286,1839,21,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0263039;MQB=1.11321e-08;MQSB=2.1784e-07;RPB=0.764983;SGB=150.973;VDB=0.821843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G70S|558|LOC_Os01g49870|protein_coding|CODING|LOC_Os01g49870.1|1|1) FN1728-S.SNP.1:28646335 chr01:028646335 0 W/28646335-28646335 FN1728-S SNP C -> A AC=1;AN=188;BQB=0.202927;DP=2697;DP4=1355,1300,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.99164e-06;MQSB=0.360194;RPB=0.914083;SGB=3.99491;VDB=0.943351;EFF=INTRON(MODIFIER||||558|LOC_Os01g49870|protein_coding|CODING|LOC_Os01g49870.1|1|1) FN-348.SNP.1:28648649 chr01:028648649 0 W/28648649-28648649 FN-348 Single Base Substitution A-G INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1761-S.SNP.1:28664344 chr01:028664344 0 W/28664344-28664344 FN1761-S SNP T -> A AC=2;AN=188;BQB=0.106761;DP=3560;DP4=1158,2348,9,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.51542e-12;MQSB=0.689399;RPB=0.905485;SGB=-113.464;VDB=0.549365;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.1:28668189 chr01:028668189 0 W/28668189-28668189 FN4190-S SNP C -> T AC=1;AN=170;BQB=0.992902;DP=2754;DP4=1372,1304,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000363108;MQB=2.13351e-10;MQSB=0.991614;RPB=0.826108;SGB=45.206;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.1:28681884 chr01:028681884 0 W/28681884-28681884 FN1200-S Single Base Substitution T-C INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-142.SNP.1:28681953 chr01:028681953 0 W/28681953-28681953 FN-142 Single Base Substitution C-T INTERGENIC HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN1721-S.SNP.1:28683209 chr01:028683209 0 W/28683209-28683209 FN1721-S SNP A -> T AC=1;AN=188;BQB=0.133573;DP=3902;DP4=2036,1817,18,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.34712e-14;MQSB=0.980313;RPB=0.832372;SGB=-4.13386;VDB=0.577185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.1:28683279 chr01:028683279 0 W/28683279-28683279 FN-107 Single Base Substitution G-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-139.SNP.1:28683614 chr01:028683614 0 W/28683614-28683614 FN-139 Single Base Substitution C-G INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1200-S.SNP.1:28683683 chr01:028683683 0 W/28683683-28683683 FN1200-S Single Base Substitution T-A INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-192.SNP.1:28683684 chr01:028683684 0 W/28683684-28683684 FN-192 Single Base Substitution A-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN4077-S.SNP.1:28684554 chr01:028684554 0 W/28684554-28684554 FN4077-S SNP G -> A AC=1;AN=182;BQB=0.974029;DP=3114;DP4=1432,1617,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.26163e-07;MQSB=0.814991;RPB=0.856339;SGB=44.1115;VDB=0.684373;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T1283|1292|LOC_Os01g49940|protein_coding|CODING|LOC_Os01g49940.1|27|1),UTR_3_PRIME(MODIFIER||80||1254|LOC_Os01g49940|protein_coding|CODING|LOC_Os01g49940.2|27|1) FN2608-S.SNP.1:28693861 chr01:028693861 0 W/28693861-28693861 FN2608-S SNP A -> T AC=2;AN=198;BQB=0.969672;DP=4589;DP4=2274,2128,8,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.28828e-11;MQSB=0.544022;RPB=0.482991;SGB=72.5245;VDB=0.113368;EFF=INTRON(MODIFIER||||1292|LOC_Os01g49940|protein_coding|CODING|LOC_Os01g49940.1|6|1),INTRON(MODIFIER||||1254|LOC_Os01g49940|protein_coding|CODING|LOC_Os01g49940.2|6|1) FN2547-S.SNP.1:28698827 chr01:028698827 0 W/28698827-28698827 FN2547-S SNP A -> T AC=1;AN=198;BQB=0.981598;DP=3304;DP4=1391,1302,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.22085e-05;MQSB=0.930295;RPB=0.99908;SGB=18.5788;VDB=0.621812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.1:28701302 chr01:028701302 0 W/28701302-28701302 FN3563-S SNP T -> C AC=1;AN=188;BQB=0.751574;DP=3232;DP4=1659,1461,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.253713;MQB=0.165746;MQSB=0;RPB=0.973179;SGB=74.9605;VDB=0.323572;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I469|1036|LOC_Os01g49950|protein_coding|CODING|LOC_Os01g49950.1|1|1) FN3539-S.SNP.1:28704748 chr01:028704748 0 W/28704748-28704748 FN3539-S SNP T -> A AC=1;AN=188;BQB=0.986462;DP=3008;DP4=1817,1120,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000171487;MQSB=2.00064e-09;RPB=0.958196;SGB=25.3545;VDB=0.0461493;EFF=INTRON(MODIFIER||||1036|LOC_Os01g49950|protein_coding|CODING|LOC_Os01g49950.1|5|1) FN-107.SNP.1:28704818 chr01:028704818 0 W/28704818-28704818 FN-107 Single Base Substitution C-G INTRON HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3788-S.SNP.1:28707555 chr01:028707555 0 W/28707555-28707555 FN3788-S SNP G -> A AC=1;AN=190;BQB=0.41429;DP=2696;DP4=1365,1211,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.01844e-07;MQSB=0.98581;RPB=0.279839;SGB=21.1058;VDB=0.724644;EFF=INTRON(MODIFIER||||1036|LOC_Os01g49950|protein_coding|CODING|LOC_Os01g49950.1|7|1) FN2097-S.SNP.1:28712590 chr01:028712590 0 W/28712590-28712590 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.975358;DP=2052;DP4=1207,801,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0462963;MQB=0.492653;MQSB=4.32963e-37;RPB=0.668453;SGB=41.6096;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.1:28719038 chr01:028719038 0 W/28719038-28719038 FN1213-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g49980 retrotransposon protein, putative, unclassified, expressed SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1749-S.SNP.1:28720416 chr01:028720416 0 W/28720416-28720416 FN1749-S SNP C -> A AC=1;AN=188;BQB=0.801054;DP=1796;DP4=918,829,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08609e-07;MQSB=0.247122;RPB=0.990695;SGB=-12.2833;VDB=0.0997075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G937C|1505|LOC_Os01g49980|protein_coding|CODING|LOC_Os01g49980.1|4|1) FN2582-S.SNP.1:28720630 chr01:028720630 0 W/28720630-28720630 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.998838;DP=3898;DP4=1964,1665,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0125705;MQB=0.466113;MQSB=0.108333;RPB=0.766191;SGB=36.5539;VDB=0.692801;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L865|1505|LOC_Os01g49980|protein_coding|CODING|LOC_Os01g49980.1|4|1) FN2314.SNP.1:28720672 chr01:028720672 0 W/28720672-28720672 FN2314 SNP G -> A AC=2;AN=192;BQB=0.0813901;DP=4914;DP4=2538,2102,13,13;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.003256;MQB=0.252962;MQSB=0.555404;RPB=0.915628;SGB=113.111;VDB=0.633833;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y851|1505|LOC_Os01g49980|protein_coding|CODING|LOC_Os01g49980.1|4|1) FN2681-S.SNP.1:28722456 chr01:028722456 0 W/28722456-28722456 FN2681-S SNP G -> A AC=2;AN=200;BQB=0.176948;DP=4627;DP4=2200,2139,28,25;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.47369e-21;MQSB=0.0173735;RPB=0.598324;SGB=238.471;VDB=0.85847;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q297*|1505|LOC_Os01g49980|protein_coding|CODING|LOC_Os01g49980.1|2|1);LOF=(LOC_Os01g49980|LOC_Os01g49980|1|1.00);NMD=(LOC_Os01g49980|LOC_Os01g49980|1|1.00) FN2267-S.SNP.1:28723860 chr01:028723860 0 W/28723860-28723860 FN2267-S SNP G -> C AC=1;AN=190;BQB=0.576546;DP=4337;DP4=1911,1773,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000922297;MQB=1.22852e-06;MQSB=0.272473;RPB=0.0707239;SGB=-34.9861;VDB=0.417694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.1:28749998 chr01:028749998 0 W/28749998-28749998 FN1466-S Single Base Substitution G-T INTRON HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1466-S.SNP.1:28750001 chr01:028750001 0 W/28750001-28750001 FN1466-S Single Base Substitution A-G INTRON HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3426-S.SNP.1:28751326 chr01:028751326 0 W/28751326-28751326 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.990796;DP=3430;DP4=1824,1501,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.57321e-08;MQSB=0.819469;RPB=0.0573547;SGB=57.786;VDB=0.179976;EFF=UTR_3_PRIME(MODIFIER||405||392|LOC_Os01g50040|protein_coding|CODING|LOC_Os01g50040.1|11|1) FN2530-S.SNP.1:28764847 chr01:028764847 0 W/28764847-28764847 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.983663;DP=3944;DP4=1915,1869,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10988e-06;MQSB=0.999834;RPB=0.752877;SGB=49.5489;VDB=0.196477;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.1:28770636 chr01:028770636 0 W/28770636-28770636 FN_827-1 Single Base Substitution A-G HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. 703-4.SNP.1:28770923 chr01:028770923 0 W/28770923-28770923 703-4 Single Base Substitution T-G INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN840-S.SNP.1:28781343 chr01:028781343 0 W/28781343-28781343 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN2628-S.SNP.1:28792562 chr01:028792562 0 W/28792562-28792562 FN2628-S SNP G -> A AC=1;AN=200;BQB=0.996731;DP=4837;DP4=2258,2312,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.33373e-07;MQSB=0.884347;RPB=0.504071;SGB=40.4492;VDB=0.878682;EFF=INTRON(MODIFIER||||1181|LOC_Os01g50100|protein_coding|CODING|LOC_Os01g50100.1|2|1) FN473-S.SNP.1:28798522 chr01:028798522 0 W/28798522-28798522 FN473-S Single Base Substitution T-C INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3900-S.SNP.1:28798916 chr01:028798916 0 W/28798916-28798916 FN3900-S SNP C -> A AC=2;AN=158;BQB=0.969523;DP=2225;DP4=1234,900,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.8432e-13;MQSB=0.980815;RPB=0.8771;SGB=103.87;VDB=0.516786;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A2|304|LOC_Os01g50120|protein_coding|CODING|LOC_Os01g50120.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A2|304|LOC_Os01g50120|protein_coding|CODING|LOC_Os01g50120.2|1|1) FN2500.SNP.1:28804740 chr01:028804740 0 W/28804740-28804740 FN2500 SNP A -> T AC=1;AN=200;BQB=0.854186;DP=5548;DP4=2872,2155,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.98101e-07;MQSB=0.999258;RPB=0.0818206;SGB=16.4591;VDB=0.0880564;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.1:28805962 chr01:028805962 0 W/28805962-28805962 FN1376-S Single Base Substitution G-A INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN3355-S.SNP.1:28805962 chr01:028805962 0 W/28805962-28805962 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.979752;DP=4603;DP4=2708,1749,16,10;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0812514;MQB=0.330158;MQSB=4.15339e-22;RPB=0.994549;SGB=112.047;VDB=0.876448;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.1:28805962 chr01:028805962 0 W/28805962-28805962 FN695-S Single Base Substitution G-A INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3939-S.SNP.1:28811337 chr01:028811337 0 W/28811337-28811337 FN3939-S SNP T -> C AC=1;AN=158;BQB=0.209715;DP=2169;DP4=921,1112,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.13984e-07;MQSB=0.997264;RPB=0.51313;SGB=19.0798;VDB=0.5863;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.1:28812272 chr01:028812272 0 W/28812272-28812272 FN947-S Single Base Substitution G-T INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN947-S.SNP.1:28812273 chr01:028812273 0 W/28812273-28812273 FN947-S Single Base Substitution C-T INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN4151-S.SNP.1:28813921 chr01:028813921 0 W/28813921-28813921 FN4151-S SNP C -> T AC=1;AN=170;BQB=0.952969;DP=1420;DP4=587,647,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.000605795;MQSB=0.447697;RPB=0.626038;SGB=27.9928;VDB=0.824582;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.1:28819394 chr01:028819394 0 W/28819394-28819394 FN459-S Single Base Substitution C-T INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1673-S.SNP.1:28822695 chr01:028822695 0 W/28822695-28822695 FN1673-S SNP G -> A AC=1;AN=188;BQB=0.0447708;DP=3325;DP4=1957,1298,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0132331;MQB=0.0462416;MQSB=0.841865;RPB=0.786742;SGB=26.0762;VDB=0.641471;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.1:28834757 chr01:028834757 0 W/28834757-28834757 FN734-S Single Base Substitution A-G INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3478-S.SNP.1:28838909 chr01:028838909 0 W/28838909-28838909 FN3478-S SNP T -> C AC=1;AN=184;BQB=0.934951;DP=2987;DP4=1635,1273,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.61397e-09;MQSB=0.781289;RPB=0.961322;SGB=57.786;VDB=0.159953;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.1:28851140 chr01:028851140 0 W/28851140-28851140 FN-166 Single Base Substitution C-T INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN598-S.SNP.1:28852334 chr01:028852334 0 W/28852334-28852334 FN598-S Single Base Substitution G-C INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN-211.SNP.1:28853944 chr01:028853944 0 W/28853944-28853944 FN-211 Single Base Substitution G-A INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1158-S.SNP.1:28855081 chr01:028855081 0 W/28855081-28855081 FN1158-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os01g50220 retrotransposon protein, putative, LINE subclass, expressed SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3452-S.SNP.1:28858614 chr01:028858614 0 W/28858614-28858614 FN3452-S SNP C -> A AC=1;AN=184;BQB=0.910448;DP=3357;DP4=1823,1446,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.147453;MQB=0.373253;MQSB=0.00185646;RPB=0.22833;SGB=57.786;VDB=0.289747;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G386|1083|LOC_Os01g50220|protein_coding|CODING|LOC_Os01g50220.1|2|1) FN967-S.SNP.1:28867470 chr01:028867470 0 W/28867470-28867470 FN967-S Single Base Substitution C-G INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2230-S.SNP.1:28867729 chr01:028867729 0 W/28867729-28867729 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.95281;DP=4944;DP4=2310,2358,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202265;MQB=3.91217e-10;MQSB=0.87887;RPB=0.864218;SGB=60.9777;VDB=0.845884;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.1:28873275 chr01:028873275 0 W/28873275-28873275 FN824-S Single Base Substitution T-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN515-S.SNP.1:28874258 chr01:028874258 0 W/28874258-28874258 FN515-S Single Base Substitution G-A INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN4161-S.SNP.1:28875427 chr01:028875427 0 W/28875427-28875427 FN4161-S SNP G -> A AC=2;AN=170;BQB=0.842006;DP=2570;DP4=1218,1226,24,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.10057e-21;MQSB=0.998043;RPB=0.0836201;SGB=167.824;VDB=0.0704916;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.1:28880786 chr01:028880786 0 W/28880786-28880786 FN918-S Single Base Substitution A-G INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-94.SNP.1:28881369 chr01:028881369 0 W/28881369-28881369 FN-94 Single Base Substitution T-A INTERGENIC HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-94.SNP.1:28881377 chr01:028881377 0 W/28881377-28881377 FN-94 Single Base Substitution G-A INTERGENIC HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2640-S.SNP.1:28883073 chr01:028883073 0 W/28883073-28883073 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.835309;DP=3956;DP4=2196,1507,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000252781;MQB=6.87927e-14;MQSB=0.0260779;RPB=0.906139;SGB=45.1159;VDB=0.229971;EFF=INTERGENIC(MODIFIER||||||||||1) FN696-S.SNP.1:28883959 chr01:028883959 0 W/28883959-28883959 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN589-S.SNP.1:28884035 chr01:028884035 0 W/28884035-28884035 FN589-S Single Base Substitution T-C INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN835-S.SNP.1:28886094 chr01:028886094 0 W/28886094-28886094 FN835-S Single Base Substitution G-C INTRON HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN836-S.SNP.1:28886204 chr01:028886204 0 W/28886204-28886204 FN836-S Single Base Substitution T-C INTRON HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3543-S.SNP.1:28888550 chr01:028888550 0 W/28888550-28888550 FN3543-S SNP A -> T AC=1;AN=188;BQB=0.0737991;DP=2832;DP4=1407,1313,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02571e-08;MQSB=0.966546;RPB=0.985506;SGB=33.7061;VDB=0.933318;EFF=INTRON(MODIFIER||||877|LOC_Os01g50320|protein_coding|CODING|LOC_Os01g50320.1|3|1),INTRON(MODIFIER||||685|LOC_Os01g50320|protein_coding|CODING|LOC_Os01g50320.2|1|1) FN1282-S.SNP.1:28891196 chr01:028891196 0 W/28891196-28891196 FN1282-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2572-S.SNP.1:28892527 chr01:028892527 0 W/28892527-28892527 FN2572-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2706-S.SNP.1:28894310 chr01:028894310 0 W/28894310-28894310 FN2706-S SNP G -> A AC=2;AN=200;BQB=0.193057;DP=5014;DP4=2359,2397,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.86017e-20;MQSB=0.960261;RPB=0.806077;SGB=130.399;VDB=0.199863;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R199Q|701|LOC_Os01g50340|protein_coding|CODING|LOC_Os01g50340.1|2|1) FN998-S.SNP.1:28897690 chr01:028897690 0 W/28897690-28897690 FN998-S Single Base Substitution C-A INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN998-S.SNP.1:28897691 chr01:028897691 0 W/28897691-28897691 FN998-S Single Base Substitution T-A INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2537-S.SNP.1:28903348 chr01:028903348 0 W/28903348-28903348 FN2537-S SNP A -> T AC=1;AN=198;BQB=0.386792;DP=4442;DP4=2141,2137,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06222e-07;MQSB=0.691332;RPB=0.933667;SGB=40.149;VDB=0.706176;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.1:28904647 chr01:028904647 0 W/28904647-28904647 FN618-S Single Base Substitution C-T INTERGENIC HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN-341.SNP.1:28906728 chr01:028906728 0 W/28906728-28906728 FN-341 Single Base Substitution G-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1129-S.SNP.1:28908828 chr01:028908828 0 W/28908828-28908828 FN1129-S Single Base Substitution G-A INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2639-S.SNP.1:28917691 chr01:028917691 0 W/28917691-28917691 FN2639-S SNP G -> T AC=1;AN=200;BQB=0.789193;DP=4728;DP4=2327,2178,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2134e-06;MQSB=0.986367;RPB=0.987761;SGB=36.6644;VDB=0.517772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.1:28917711 chr01:028917711 0 W/28917711-28917711 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.983375;DP=2600;DP4=1367,1176,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4365e-05;MQSB=0.974341;RPB=0.192005;SGB=39.8925;VDB=0.637028;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.1:28919509 chr01:028919509 0 W/28919509-28919509 FN-256 Single Base Substitution A-T INTERGENIC HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN-308.SNP.1:28921184 chr01:028921184 0 W/28921184-28921184 FN-308 Single Base Substitution C-T INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2711-S.SNP.1:28936393 chr01:028936393 0 W/28936393-28936393 FN2711-S SNP G -> T AC=2;AN=200;BQB=0.285095;DP=5113;DP4=2201,2624,27,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.68786e-26;MQSB=0.871465;RPB=0.132093;SGB=201.63;VDB=0.218015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.1:28936400 chr01:028936400 0 W/28936400-28936400 FN2711-S SNP A -> T AC=2;AN=200;BQB=0.98111;DP=5159;DP4=2315,2626,26,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.89348e-29;MQSB=0.906554;RPB=0.359767;SGB=159.24;VDB=0.165902;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.1:28947134 chr01:028947134 0 W/28947134-28947134 FN4305-S SNP C -> G AC=1;AN=170;BQB=0.999813;DP=2905;DP4=1367,1458,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.43968e-11;MQSB=0.93735;RPB=0.854227;SGB=78.9707;VDB=0.216811;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E298Q|541|LOC_Os01g50420|protein_coding|CODING|LOC_Os01g50420.1|1|1) FN889-S.SNP.1:28948701 chr01:028948701 0 W/28948701-28948701 FN889-S Single Base Substitution A-G INTERGENIC HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN706-S.SNP.1:28950462 chr01:028950462 0 W/28950462-28950462 FN706-S Single Base Substitution A-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN941-S.SNP.1:28959188 chr01:028959188 0 W/28959188-28959188 FN941-S Single Base Substitution G-T INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2631-S.SNP.1:28961743 chr01:028961743 0 W/28961743-28961743 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.650956;DP=4810;DP4=2088,2441,8,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.92788e-10;MQSB=0.0245604;RPB=0.0160596;SGB=123.342;VDB=0.289268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN1243-S Single Base Substitution C-T INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1344-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN1344-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1556-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN1556-S Single Base Substitution C-T INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2268-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.988385;DP=3994;DP4=2358,1280,25,5;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0;MQB=5.98649e-13;MQSB=0.0850902;RPB=0.972329;SGB=61.9679;VDB=0.246242;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN2304 SNP C -> T AC=2;AN=192;BQB=0.154552;DP=4480;DP4=2226,1885,51,16;HOB=0.0206163;ICB=0.494846;MQ=41;MQ0F=0;MQB=4.48002e-19;MQSB=0.0108262;RPB=0.786819;SGB=-47.5821;VDB=0.0765738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN2461 SNP C -> T AC=1;AN=200;BQB=0.996455;DP=4307;DP4=2330,1675,20,6;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=9.53978e-07;MQSB=0.000850614;RPB=0.82694;SGB=52.9314;VDB=0.248816;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN2729-S SNP C -> T AC=2;AN=200;BQB=0.930816;DP=4806;DP4=2508,1948,26,20;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0;MQB=7.80607e-14;MQSB=1.48043e-07;RPB=0.529259;SGB=105.035;VDB=0.969725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN3531-S SNP C -> T AC=1;AN=188;BQB=0.997851;DP=2986;DP4=1421,1439,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0;MQB=0.00090882;MQSB=1.49436e-08;RPB=0.998878;SGB=44.4357;VDB=0.881302;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN4090-S SNP C -> T AC=2;AN=182;BQB=0.801157;DP=2885;DP4=1488,1201,17,17;HOB=0.0217365;ICB=0.494567;MQ=42;MQ0F=0;MQB=1.91427e-12;MQSB=0.000404479;RPB=0.650338;SGB=109.356;VDB=0.908378;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN4312-S SNP C -> T AC=2;AN=170;BQB=0.884593;DP=2602;DP4=1331,1104,7,13;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0;MQB=4.55586e-07;MQSB=1.67627e-06;RPB=0.165813;SGB=10.1031;VDB=0.880835;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN828-S Single Base Substitution C-T INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN901-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN901-S Single Base Substitution C-T INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN986-S.SNP.1:28962461 chr01:028962461 0 W/28962461-28962461 FN986-S Single Base Substitution C-T INTERGENIC HOMO SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3331-S.SNP.1:28962494 chr01:028962494 0 W/28962494-28962494 FN3331-S SNP G -> A AC=1;AN=184;BQB=0.523079;DP=3292;DP4=1607,1554,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=0.000133008;MQSB=0.105422;RPB=0.999799;SGB=15.7097;VDB=0.784132;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.1:28963916 chr01:028963916 0 W/28963916-28963916 FN911-S Single Base Substitution A-G INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2715-S.SNP.1:28967030 chr01:028967030 0 W/28967030-28967030 FN2715-S SNP C -> T AC=1;AN=200;BQB=1;DP=4996;DP4=2590,2072,8,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.47497e-06;MQSB=3.98699e-29;RPB=0.730066;SGB=26.8797;VDB=0.772599;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.1:28967699 chr01:028967699 0 W/28967699-28967699 FN1309-S Single Base Substitution C-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4017-S.SNP.1:28972256 chr01:028972256 0 W/28972256-28972256 FN4017-S SNP G -> A AC=1;AN=168;BQB=0.975953;DP=2396;DP4=1300,1028,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.41763e-06;MQSB=0.876371;RPB=0.902574;SGB=38.8805;VDB=0.800627;EFF=INTRON(MODIFIER||||260|LOC_Os01g50450|protein_coding|CODING|LOC_Os01g50450.1|3|1) FN3632-S.SNP.1:28986879 chr01:028986879 0 W/28986879-28986879 FN3632-S SNP G -> A AC=1;AN=190;BQB=0.998543;DP=3003;DP4=1474,1387,8,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.59974e-16;MQSB=0.902115;RPB=0.511268;SGB=78.7471;VDB=0.333462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.1:28987158 chr01:028987158 0 W/28987158-28987158 FN1527-S Single Base Substitution G-A INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3577-S.SNP.1:29000475 chr01:029000475 0 W/29000475-29000475 FN3577-S SNP G -> T AC=1;AN=188;BQB=0.809422;DP=3081;DP4=1270,1743,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0886076;MQB=0.0045687;MQSB=5.50199e-07;RPB=0.721458;SGB=71.6954;VDB=0.939416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A1004E|1524|LOC_Os01g50500|protein_coding|CODING|LOC_Os01g50500.1|1|1) FN3577-S.SNP.1:29000476 chr01:029000476 0 W/29000476-29000476 FN3577-S SNP C -> G AC=1;AN=188;BQB=0.869133;DP=3068;DP4=1271,1726,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0873533;MQB=0.00474947;MQSB=1.56386e-06;RPB=0.652958;SGB=57.244;VDB=0.977449;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1004P|1524|LOC_Os01g50500|protein_coding|CODING|LOC_Os01g50500.1|1|1) FN1237-S.SNP.1:29002398 chr01:029002398 0 W/29002398-29002398 FN1237-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g50500 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2664-S.SNP.1:29002498 chr01:029002498 0 W/29002498-29002498 FN2664-S SNP G -> A AC=2;AN=200;BQB=0.999018;DP=4175;DP4=1862,2067,15,31;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.116886;MQB=0.069704;MQSB=0.205988;RPB=0.996511;SGB=206.235;VDB=0.889531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P330S|1524|LOC_Os01g50500|protein_coding|CODING|LOC_Os01g50500.1|1|1) FN3564-S.SNP.1:29002902 chr01:029002902 0 W/29002902-29002902 FN3564-S SNP C -> A AC=1;AN=188;BQB=0.999854;DP=2713;DP4=1270,1374,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=23;MQ0F=0.292296;MQB=0.922995;MQSB=0;RPB=0.998192;SGB=53.7007;VDB=0.474315;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G195V|1524|LOC_Os01g50500|protein_coding|CODING|LOC_Os01g50500.1|1|1) FN4189-S.SNP.1:29005993 chr01:029005993 0 W/29005993-29005993 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.99718;DP=2155;DP4=922,1132,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.115545;MQB=0.923892;MQSB=0.116842;RPB=0.970616;SGB=34.5445;VDB=0.615174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.1:29012225 chr01:029012225 0 W/29012225-29012225 FN1460-S Single Base Substitution C-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN-381.SNP.1:29014937 chr01:029014937 0 W/29014937-29014937 FN-381 Single Base Substitution A-G INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3721-S.SNP.1:29019970 chr01:029019970 0 W/29019970-29019970 FN3721-S SNP C -> G AC=1;AN=190;BQB=0.969437;DP=2740;DP4=1321,1306,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19647e-07;MQSB=0.522697;RPB=0.94794;SGB=58.2031;VDB=0.79373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.1:29022540 chr01:029022540 0 W/29022540-29022540 FN2493 SNP G -> A AC=1;AN=200;BQB=0.599312;DP=4271;DP4=1871,1993,6,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=4.85467e-07;MQSB=0.00340941;RPB=0.288512;SGB=-13.1102;VDB=0.650456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.1:29023907 chr01:029023907 0 W/29023907-29023907 FN2436 SNP C -> T AC=2;AN=200;BQB=0.412365;DP=4869;DP4=2020,2444,29,41;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.27807e-37;MQSB=0.796615;RPB=0.755086;SGB=192.378;VDB=0.605823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.1:29023907 chr01:029023907 0 W/29023907-29023907 FN3676-S SNP C -> T AC=2;AN=190;BQB=0.00115208;DP=2597;DP4=995,1489,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.28887e-06;MQSB=0.987516;RPB=0.563791;SGB=13.4344;VDB=0.940963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.1:29025710 chr01:029025710 0 W/29025710-29025710 FN1290-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g50530 cytochrome P450, putative, expressed SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN244-S.SNP.1:29026017 chr01:029026017 0 W/29026017-29026017 FN244-S Single Base Substitution A-G INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN_398-1.SNP.1:29032798 chr01:029032798 0 W/29032798-29032798 FN_398-1 Single Base Substitution T-C INTRON HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN3990-S.SNP.1:29033050 chr01:029033050 0 W/29033050-29033050 FN3990-S SNP G -> A AC=1;AN=168;BQB=0.479546;DP=2701;DP4=1428,1129,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0033321;MQB=4.07438e-06;MQSB=0.121801;RPB=0.511442;SGB=78.7577;VDB=0.849332;EFF=INTRON(MODIFIER||||432|LOC_Os01g50550|protein_coding|CODING|LOC_Os01g50550.1|1|1) FN2464.SNP.1:29043680 chr01:029043680 0 W/29043680-29043680 FN2464 SNP C -> A AC=1;AN=200;BQB=0.90181;DP=5227;DP4=2300,2682,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.89137e-07;MQSB=0.874073;RPB=0.494522;SGB=33.0593;VDB=0.556787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.1:29048876 chr01:029048876 0 W/29048876-29048876 FN3875-S SNP G -> A AC=2;AN=158;BQB=0.999565;DP=2697;DP4=1401,1197,18,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.48915e-17;MQSB=0.981637;RPB=0.282277;SGB=134.456;VDB=0.00968549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.1:29054376 chr01:029054376 0 W/29054376-29054376 FN2088-S SNP A -> G AC=2;AN=168;BQB=0.0373158;DP=1627;DP4=884,718,5,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.53168e-06;MQSB=0.617542;RPB=0.623851;SGB=4.1907;VDB=0.486449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.1:29056360 chr01:029056360 0 W/29056360-29056360 FN1027-S Single Base Substitution C-T INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN455-S.SNP.1:29065033 chr01:029065033 0 W/29065033-29065033 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN477-S.SNP.1:29065522 chr01:029065522 0 W/29065522-29065522 FN477-S Single Base Substitution C-T INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2468.SNP.1:29069681 chr01:029069681 0 W/29069681-29069681 FN2468 SNP A -> G AC=1;AN=200;BQB=0.929681;DP=4628;DP4=2122,2141,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.29014e-07;MQSB=0.986152;RPB=0.464937;SGB=40.4492;VDB=0.15979;EFF=INTRON(MODIFIER||||671|LOC_Os01g50616|protein_coding|CODING|LOC_Os01g50616.1|9|1),INTRON(MODIFIER||||664|LOC_Os01g50616|protein_coding|CODING|LOC_Os01g50616.2|9|1) FN1286-S.SNP.1:29076922 chr01:029076922 0 W/29076922-29076922 FN1286-S Single Base Substitution C-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2348.SNP.1:29079086 chr01:029079086 0 W/29079086-29079086 FN2348 SNP C -> T AC=2;AN=192;BQB=0.0103882;DP=4818;DP4=2123,2342,35,26;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.0120382;MQB=1.88382e-10;MQSB=0.523238;RPB=0.0578741;SGB=-1366.11;VDB=0.926707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.1:29082263 chr01:029082263 0 W/29082263-29082263 FN2469 SNP G -> T AC=2;AN=200;BQB=0.700065;DP=4780;DP4=2622,1604,31,14;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0981172;MQB=0.688785;MQSB=0;RPB=0.99529;SGB=-46.3708;VDB=0.85943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.1:29082263 chr01:029082263 0 W/29082263-29082263 FN3592-S SNP G -> T AC=1;AN=188;BQB=0.930671;DP=3222;DP4=1634,1470,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0468653;MQB=0.997994;MQSB=0.00141928;RPB=0.392796;SGB=58.0655;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.1:29082263 chr01:029082263 0 W/29082263-29082263 FN555-S Single Base Substitution G-T INTERGENIC HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. W276-2-1.SNP.1:29082263 chr01:029082263 0 W/29082263-29082263 W276-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2271-S.SNP.1:29086033 chr01:029086033 0 W/29086033-29086033 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.00429298;DP=3886;DP4=1854,1808,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.126608;MQB=0.849838;MQSB=0;RPB=0.92114;SGB=58.2031;VDB=0.158752;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A359|1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|1|1) FN3826-S.SNP.1:29087764 chr01:029087764 0 W/29087764-29087764 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.985089;DP=3404;DP4=1433,1801,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0132197;MQB=0.0843184;MQSB=8.098e-22;RPB=0.874684;SGB=46.7622;VDB=0.889776;EFF=SPLICE_SITE_REGION(LOW||||1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|2|1),INTRON(MODIFIER||||1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|2|1) FN2474.SNP.1:29088759 chr01:029088759 0 W/29088759-29088759 FN2474 SNP C -> A AC=1;AN=200;BQB=0.351744;DP=4236;DP4=1887,2068,6,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00118036;MQB=1.56395e-09;MQSB=0.160762;RPB=0.544842;SGB=77.2904;VDB=0.745488;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R1166|1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|3|1) FN2474.SNP.1:29088760 chr01:029088760 0 W/29088760-29088760 FN2474 SNP G -> A AC=1;AN=200;BQB=0.521245;DP=4224;DP4=1885,2058,6,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00118371;MQB=9.8382e-09;MQSB=0.0996997;RPB=0.231017;SGB=58.2954;VDB=0.612829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1166Q|1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|3|1) FN2689-S.SNP.1:29090379 chr01:029090379 0 W/29090379-29090379 FN2689-S SNP G -> A AC=2;AN=200;BQB=0.801697;DP=4564;DP4=2147,2172,20,18;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0168712;MQB=0.111446;MQSB=5.13666e-19;RPB=0.884699;SGB=84.1935;VDB=0.95679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1695T|1862|LOC_Os01g50640|protein_coding|CODING|LOC_Os01g50640.1|4|1) FN4148-S.SNP.1:29091694 chr01:029091694 0 W/29091694-29091694 FN4148-S SNP C -> A AC=1;AN=170;BQB=0.999999;DP=2177;DP4=865,1230,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00137804;MQB=2.69735e-07;MQSB=0.567262;RPB=0.577328;SGB=61.2001;VDB=0.0680606;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A991|1046|LOC_Os01g50650|protein_coding|CODING|LOC_Os01g50650.1|2|1) FN4165-S.SNP.1:29091717 chr01:029091717 0 W/29091717-29091717 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.870291;DP=2156;DP4=923,1167,1,12;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00371058;MQB=2.63714e-06;MQSB=0.297869;RPB=0.392138;SGB=52.3148;VDB=0.178826;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G984R|1046|LOC_Os01g50650|protein_coding|CODING|LOC_Os01g50650.1|2|1) FN2312.SNP.1:29092110 chr01:029092110 0 W/29092110-29092110 FN2312 SNP C -> T AC=1;AN=192;BQB=0.821579;DP=4851;DP4=2233,2360,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206143;MQB=5.27106e-14;MQSB=0.295497;RPB=0.673653;SGB=82.5522;VDB=0.60554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D853N|1046|LOC_Os01g50650|protein_coding|CODING|LOC_Os01g50650.1|2|1) FN1443-S.SNP.1:29094342 chr01:029094342 0 W/29094342-29094342 FN1443-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g50650 retrotransposon protein, putative, unclassified, expressed SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1646-S.SNP.1:29097901 chr01:029097901 0 W/29097901-29097901 FN1646-S Single Base Substitution A-G INTERGENIC Homo SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN3439-S.SNP.1:29098496 chr01:029098496 0 W/29098496-29098496 FN3439-S SNP T -> A AC=2;AN=184;BQB=0.938735;DP=2724;DP4=1423,1221,8,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.03576e-12;MQSB=0.959845;RPB=0.33373;SGB=33.3622;VDB=0.0654448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.1:29113817 chr01:029113817 0 W/29113817-29113817 FN3316-S SNP C -> T AC=2;AN=184;BQB=0.676529;DP=2731;DP4=1345,1306,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000366166;MQB=2.23305e-11;MQSB=0.847847;RPB=0.718783;SGB=103.004;VDB=0.652897;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L313F|901|LOC_Os01g50690|protein_coding|CODING|LOC_Os01g50690.1|9|1) FN961-S.SNP.1:29114553 chr01:029114553 0 W/29114553-29114553 FN961-S Single Base Substitution C-T INTRON HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2081-S.SNP.1:29124375 chr01:029124375 0 W/29124375-29124375 FN2081-S SNP T -> C AC=1;AN=168;BQB=0.0863492;DP=1919;DP4=1057,780,3,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00210981;MQSB=0.997982;RPB=0.507616;SGB=-53.9455;VDB=0.2043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L646P|652|LOC_Os01g50700|protein_coding|CODING|LOC_Os01g50700.1|11|1) FN851-S.SNP.1:29129914 chr01:029129914 0 W/29129914-29129914 FN851-S Single Base Substitution G-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN4121-S.SNP.1:29145248 chr01:029145248 0 W/29145248-29145248 FN4121-S SNP C -> T AC=1;AN=182;BQB=0.942562;DP=2865;DP4=1373,1429,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.98887e-08;MQSB=0.998183;RPB=0.913384;SGB=48.6223;VDB=0.770067;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.1:29148506 chr01:029148506 0 W/29148506-29148506 FN-365 Single Base Substitution T-C INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN541-S.SNP.1:29153213 chr01:029153213 0 W/29153213-29153213 FN541-S Single Base Substitution T-C INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN687-S.SNP.1:29156422 chr01:029156422 0 W/29156422-29156422 FN687-S Single Base Substitution A-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN4111-S.SNP.1:29160244 chr01:029160244 0 W/29160244-29160244 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.853779;DP=2905;DP4=1454,1302,29,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.59522e-31;MQSB=0.900202;RPB=0.380659;SGB=166.091;VDB=0.0818491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T83I|353|LOC_Os01g50760|protein_coding|CODING|LOC_Os01g50760.1|2|1) FN4111-S.SNP.1:29160245 chr01:029160245 0 W/29160245-29160245 FN4111-S SNP A -> T AC=2;AN=182;BQB=0.993923;DP=2908;DP4=1473,1308,27,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.56328e-31;MQSB=0.842007;RPB=0.384854;SGB=214.544;VDB=0.10337;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T83|353|LOC_Os01g50760|protein_coding|CODING|LOC_Os01g50760.1|2|1) FN3856-S.SNP.1:29163891 chr01:029163891 0 W/29163891-29163891 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.542673;DP=2421;DP4=1254,1086,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.65508e-07;MQSB=0.993536;RPB=0.659159;SGB=0.716704;VDB=0.847865;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.1:29169722 chr01:029169722 0 W/29169722-29169722 FN997-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3772-S.SNP.1:29171269 chr01:029171269 0 W/29171269-29171269 FN3772-S SNP C -> T AC=1;AN=190;BQB=0.0868375;DP=3135;DP4=1768,1252,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68295e-10;MQSB=0.994419;RPB=0.072731;SGB=5.66499;VDB=0.489158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P9L|148|LOC_Os01g50780|protein_coding|CODING|LOC_Os01g50780.1|1|1) FN3947-S.SNP.1:29174464 chr01:029174464 0 W/29174464-29174464 FN3947-S SNP C -> T AC=1;AN=168;BQB=0.814866;DP=3540;DP4=2028,1419,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.198588;MQB=0.180594;MQSB=9.96467e-19;RPB=0.969037;SGB=55.3328;VDB=0.352025;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.1:29177926 chr01:029177926 0 W/29177926-29177926 FN1651-S Single Base Substitution G-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3987-S.SNP.1:29186150 chr01:029186150 0 W/29186150-29186150 FN3987-S SNP A -> T AC=1;AN=168;BQB=0.996178;DP=2898;DP4=1438,1353,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22486e-12;MQSB=0.980029;RPB=0.75155;SGB=34.3388;VDB=0.964305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.1:29188520 chr01:029188520 0 W/29188520-29188520 FN2440 SNP C -> T AC=1;AN=200;BQB=0.911147;DP=4607;DP4=2080,2253,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.34559e-08;MQSB=0.973704;RPB=0.286293;SGB=21.6694;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.1:29191046 chr01:029191046 0 W/29191046-29191046 FN1549-S Single Base Substitution C-A INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1650-S.SNP.1:29195750 chr01:029195750 0 W/29195750-29195750 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN4185-S.SNP.1:29199224 chr01:029199224 0 W/29199224-29199224 FN4185-S SNP G -> A AC=2;AN=170;BQB=0.846467;DP=2372;DP4=1169,1124,8,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.72248e-09;MQSB=0.991637;RPB=0.490691;SGB=83.4133;VDB=0.717552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-380.SNP.1:29200734 chr01:029200734 0 W/29200734-29200734 FN-380 Single Base Substitution C-T INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1750-S.SNP.1:29209257 chr01:029209257 0 W/29209257-29209257 FN1750-S SNP C -> G AC=2;AN=188;BQB=0.492118;DP=1873;DP4=737,1065,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.16909e-09;MQSB=0.734925;RPB=0.809553;SGB=13.2547;VDB=0.321759;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A55|251|LOC_Os01g50849|protein_coding|CODING|LOC_Os01g50849.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A55|251|LOC_Os01g50849|protein_coding|CODING|LOC_Os01g50849.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A55|252|LOC_Os01g50849|protein_coding|CODING|LOC_Os01g50849.3|1|1) FN1332-S.SNP.1:29210812 chr01:029210812 0 W/29210812-29210812 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3561-S.SNP.1:29212528 chr01:029212528 0 W/29212528-29212528 FN3561-S SNP G -> A AC=2;AN=188;BQB=0.737713;DP=3127;DP4=1581,1406,26,32;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.96975e-31;MQSB=0.997418;RPB=0.4933;SGB=252.438;VDB=0.773995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.1:29214103 chr01:029214103 0 W/29214103-29214103 FN2331 SNP G -> A AC=1;AN=192;BQB=0.776196;DP=4513;DP4=2213,1912,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000221582;MQB=9.2431e-15;MQSB=0.999878;RPB=0.494696;SGB=57.1218;VDB=0.0281973;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.1:29216596 chr01:029216596 0 W/29216596-29216596 FN1133-S Single Base Substitution C-A INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2151-S.SNP.1:29226278 chr01:029226278 0 W/29226278-29226278 FN2151-S SNP G -> A AC=2;AN=168;BQB=0.690624;DP=1680;DP4=1091,525,17,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.92511e-12;MQSB=0.859352;RPB=0.000991604;SGB=75.9177;VDB=0.0378606;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.1:29228628 chr01:029228628 0 W/29228628-29228628 FN-394 Single Base Substitution C-T INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2231-S.SNP.1:29240426 chr01:029240426 0 W/29240426-29240426 FN2231-S SNP A -> T AC=1;AN=190;BQB=0.178366;DP=4950;DP4=2398,2173,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36256e-12;MQSB=0.961038;RPB=0.176047;SGB=-7.12933;VDB=0.960242;EFF=UTR_3_PRIME(MODIFIER||11||133|LOC_Os01g50930|protein_coding|CODING|LOC_Os01g50930.2|3|1),UTR_3_PRIME(MODIFIER||3715||183|LOC_Os01g50930|protein_coding|CODING|LOC_Os01g50930.1|4|1) FN2476.SNP.1:29269921 chr01:029269921 0 W/29269921-29269921 FN2476 SNP G -> A AC=1;AN=200;BQB=0.930741;DP=4534;DP4=1887,2241,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31594e-13;MQSB=0.988957;RPB=0.103796;SGB=39.9056;VDB=0.0859158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.1:29274032 chr01:029274032 0 W/29274032-29274032 FN3356-S SNP G -> T AC=1;AN=184;BQB=0.44928;DP=2838;DP4=1160,1581,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000168523;MQSB=0.00360191;RPB=0.986197;SGB=28.7043;VDB=0.00519188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.1:29285224 chr01:029285224 0 W/29285224-29285224 FN-345 Single Base Substitution A-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2765-S.SNP.1:29288572 chr01:029288572 0 W/29288572-29288572 FN2765-S SNP A -> T AC=1;AN=198;BQB=0.553657;DP=4131;DP4=2090,1817,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.6482e-08;MQSB=0.720181;RPB=0.969596;SGB=49.5489;VDB=0.264813;EFF=UTR_3_PRIME(MODIFIER||1320||504|LOC_Os01g50970|protein_coding|CODING|LOC_Os01g50970.1|4|1) FN-299.SNP.1:29303295 chr01:029303295 0 W/29303295-29303295 FN-299 Single Base Substitution T-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-299.SNP.1:29303296 chr01:029303296 0 W/29303296-29303296 FN-299 Single Base Substitution T-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN3562-S.SNP.1:29306232 chr01:029306232 0 W/29306232-29306232 FN3562-S SNP T -> C AC=1;AN=188;BQB=0.986478;DP=3144;DP4=2098,839,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0099e-10;MQSB=0.963844;RPB=0.875214;SGB=38.7926;VDB=0.020043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.1:29313911 chr01:029313911 0 W/29313911-29313911 FN1184-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1184-S.SNP.1:29313912 chr01:029313912 0 W/29313912-29313912 FN1184-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1617-S.SNP.1:29323403 chr01:029323403 0 W/29323403-29323403 FN1617-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3421-S.SNP.1:29323621 chr01:029323621 0 W/29323621-29323621 FN3421-S SNP T -> C AC=2;AN=184;BQB=0.985758;DP=3763;DP4=1506,2063,21,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.60964e-22;MQSB=0.999872;RPB=0.449629;SGB=130.836;VDB=0.878354;EFF=INTRON(MODIFIER||||243|LOC_Os01g51050|protein_coding|CODING|LOC_Os01g51050.1|3|1) FN2660-S.SNP.1:29329544 chr01:029329544 0 W/29329544-29329544 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.880629;DP=5022;DP4=2571,2273,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09733e-11;MQSB=0.90552;RPB=0.868089;SGB=37.3004;VDB=0.328754;EFF=INTRON(MODIFIER||||456|LOC_Os01g51060|protein_coding|CODING|LOC_Os01g51060.1|2|1) FN622-S.SNP.1:29331933 chr01:029331933 0 W/29331933-29331933 FN622-S Single Base Substitution G-C INTRON HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN4064-S.SNP.1:29332121 chr01:029332121 0 W/29332121-29332121 FN4064-S SNP T -> C AC=1;AN=168;BQB=0.164789;DP=2337;DP4=1051,1170,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000465738;MQSB=0.966132;RPB=0.94819;SGB=-18.3882;VDB=0.478779;EFF=INTRON(MODIFIER||||456|LOC_Os01g51060|protein_coding|CODING|LOC_Os01g51060.1|2|1) FN3714-S.SNP.1:29333294 chr01:029333294 0 W/29333294-29333294 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.993907;DP=2901;DP4=1505,1276,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.45433e-09;MQSB=0.970989;RPB=0.51093;SGB=39.6545;VDB=0.112199;EFF=INTRON(MODIFIER||||456|LOC_Os01g51060|protein_coding|CODING|LOC_Os01g51060.1|1|1) FN-95.SNP.1:29336899 chr01:029336899 0 W/29336899-29336899 FN-95 Single Base Substitution G-T INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1082-S.SNP.1:29338579 chr01:029338579 0 W/29338579-29338579 FN1082-S Single Base Substitution G-A INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN-123.SNP.1:29339548 chr01:029339548 0 W/29339548-29339548 FN-123 Single Base Substitution G-T INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1131-S.SNP.1:29339548 chr01:029339548 0 W/29339548-29339548 FN1131-S Single Base Substitution G-T INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN444-S.SNP.1:29339548 chr01:029339548 0 W/29339548-29339548 FN444-S Single Base Substitution G-T INTERGENIC HOMO SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN772-S.SNP.1:29339548 chr01:029339548 0 W/29339548-29339548 FN772-S Single Base Substitution G-T INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-286.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN-286 Single Base Substitution G-C INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN1219-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN1219-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2207-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN2207-S SNP G -> C AC=2;AN=190;BQB=0.721775;DP=3494;DP4=1450,1781,9,4;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.64731e-06;MQSB=7.38776e-08;RPB=0.664783;SGB=18.552;VDB=0.532627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN3356-S SNP G -> C AC=1;AN=184;BQB=0.992209;DP=3329;DP4=1688,1544,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.6443e-08;MQSB=0.00292341;RPB=0.13297;SGB=46.3132;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN512-S Single Base Substitution G-C INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN533-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN533-S Single Base Substitution G-C INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN791-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN791-S Single Base Substitution G-C INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN848-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN848-S Single Base Substitution G-C INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN924-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN924-S Single Base Substitution G-C INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN976-S.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 FN976-S Single Base Substitution G-C INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. W470-2-1.SNP.1:29344350 chr01:029344350 0 W/29344350-29344350 W470-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN4093-S.SNP.1:29344398 chr01:029344398 0 W/29344398-29344398 FN4093-S SNP G -> C AC=2;AN=182;BQB=0.898898;DP=2789;DP4=1330,1388,11,12;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0.0211545;MQB=3.46365e-05;MQSB=2.62956e-09;RPB=0.685418;SGB=98.2417;VDB=0.334646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.1:29347544 chr01:029347544 0 W/29347544-29347544 FN2593-S SNP T -> A AC=1;AN=198;BQB=0.997435;DP=3815;DP4=1756,1796,8,23;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000524246;MQB=1.57613e-14;MQSB=0.100359;RPB=0.748454;SGB=30.086;VDB=0.0838275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y679N|877|LOC_Os01g51080|protein_coding|CODING|LOC_Os01g51080.1|2|1) FN915-S.SNP.1:29348305 chr01:029348305 0 W/29348305-29348305 FN915-S Single Base Substitution G-A INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2188-S.SNP.1:29352392 chr01:029352392 0 W/29352392-29352392 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.303558;DP=3585;DP4=1599,1708,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00055788;MQB=2.09617e-05;MQSB=0.335833;RPB=0.392332;SGB=4.11112;VDB=0.981033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.1:29352750 chr01:029352750 0 W/29352750-29352750 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.755244;DP=3697;DP4=1664,1948,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00225787;MQSB=0.852871;RPB=0.566659;SGB=28.7043;VDB=0.809714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A860V|881|LOC_Os01g51100|protein_coding|CODING|LOC_Os01g51100.1|3|1) FN_N1-213-1.SNP.1:29363033 chr01:029363033 0 W/29363033-29363033 FN_N1-213-1 Single Base Substitution C-T HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN811-S.SNP.1:29367766 chr01:029367766 0 W/29367766-29367766 FN811-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3675-S.SNP.1:29368953 chr01:029368953 0 W/29368953-29368953 FN3675-S SNP C -> A AC=2;AN=190;BQB=0.686788;DP=2397;DP4=997,1222,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.65495e-13;MQSB=0.999577;RPB=0.483967;SGB=94.6341;VDB=0.428983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.1:29392416 chr01:029392416 0 W/29392416-29392416 FN2390 SNP C -> A AC=2;AN=200;BQB=0.12698;DP=4151;DP4=1932,1956,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.77591e-12;MQSB=0.244276;RPB=0.996831;SGB=105.163;VDB=0.943512;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.1:29394558 chr01:029394558 0 W/29394558-29394558 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-272.SNP.1:29401526 chr01:029401526 0 W/29401526-29401526 FN-272 Single Base Substitution G-C INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1642-S.SNP.1:29436093 chr01:029436093 0 W/29436093-29436093 FN1642-S Single Base Substitution A-T UTR_3_PRIME Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2555-S.SNP.1:29443000 chr01:029443000 0 W/29443000-29443000 FN2555-S SNP G -> T AC=1;AN=198;BQB=0.390485;DP=4467;DP4=2026,2241,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.48582e-06;MQSB=0.964415;RPB=0.162539;SGB=13.7737;VDB=0.451699;EFF=INTRON(MODIFIER||||194|LOC_Os01g51220|protein_coding|CODING|LOC_Os01g51220.1|1|1) FN2398.SNP.1:29449382 chr01:029449382 0 W/29449382-29449382 FN2398 SNP T -> A AC=1;AN=200;BQB=0.761859;DP=4690;DP4=2085,2345,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42984e-07;MQSB=0.999864;RPB=0.994994;SGB=45.0543;VDB=0.526728;EFF=INTRON(MODIFIER||||441|LOC_Os01g51230|protein_coding|CODING|LOC_Os01g51230.1|2|1) FN2398.SNP.1:29449383 chr01:029449383 0 W/29449383-29449383 FN2398 SNP A -> C AC=1;AN=200;BQB=0.902884;DP=4697;DP4=2133,2382,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36201e-07;MQSB=0.98006;RPB=0.977082;SGB=19.0642;VDB=0.580208;EFF=INTRON(MODIFIER||||441|LOC_Os01g51230|protein_coding|CODING|LOC_Os01g51230.1|2|1) FN3473-S.SNP.1:29459578 chr01:029459578 0 W/29459578-29459578 FN3473-S SNP T -> C AC=1;AN=184;BQB=0.456745;DP=2378;DP4=1194,1088,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.83457e-10;MQSB=0.995549;RPB=0.235512;SGB=9.8459;VDB=0.438412;EFF=INTRON(MODIFIER||||337|LOC_Os01g51250|protein_coding|CODING|LOC_Os01g51250.1|1|1) FN3473-S.SNP.1:29459579 chr01:029459579 0 W/29459579-29459579 FN3473-S SNP A -> T AC=1;AN=184;BQB=0.967687;DP=2366;DP4=1200,1076,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.92776e-10;MQSB=0.999488;RPB=0.164388;SGB=62.3078;VDB=0.136474;EFF=INTRON(MODIFIER||||337|LOC_Os01g51250|protein_coding|CODING|LOC_Os01g51250.1|1|1) FN3473-S.SNP.1:29463257 chr01:029463257 0 W/29463257-29463257 FN3473-S SNP A -> G AC=1;AN=184;BQB=0.955492;DP=2873;DP4=1303,1482,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=6.86385e-09;MQSB=0.0144407;RPB=0.142008;SGB=28.3187;VDB=0.508404;EFF=INTERGENIC(MODIFIER||||||||||1) FN4036-S.SNP.1:29465923 chr01:029465923 0 W/29465923-29465923 FN4036-S SNP C -> T AC=1;AN=168;BQB=0.311053;DP=3540;DP4=1421,1881,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000615534;MQSB=0.822019;RPB=0.264937;SGB=17.3231;VDB=0.894887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.1:29467174 chr01:029467174 0 W/29467174-29467174 FN3720-S SNP A -> T AC=1;AN=190;BQB=0.83903;DP=2781;DP4=1229,1427,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.94676e-05;MQSB=0.868787;RPB=0.997077;SGB=28.9929;VDB=0.833739;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.1:29470694 chr01:029470694 0 W/29470694-29470694 FN_N1-119-1 Single Base Substitution A-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN1625-S.SNP.1:29472767 chr01:029472767 0 W/29472767-29472767 FN1625-S Single Base Substitution T-C INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:29472767 chr01:029472767 0 W/29472767-29472767 FN1626-S SNP T -> C AC=1;AN=188;BQB=0.290815;DP=2211;DP4=1585,580,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.35585e-06;MQSB=0.910791;RPB=0.871738;SGB=20.9896;VDB=0.74012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.1:29474234 chr01:029474234 0 W/29474234-29474234 FN1213-S Single Base Substitution C-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN941-S.SNP.1:29474288 chr01:029474288 0 W/29474288-29474288 FN941-S Single Base Substitution A-G INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2689-S.SNP.1:29476962 chr01:029476962 0 W/29476962-29476962 FN2689-S SNP T -> A AC=1;AN=200;BQB=0.706159;DP=4798;DP4=2142,2451,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0284e-09;MQSB=0.968913;RPB=0.998238;SGB=24.2746;VDB=0.596238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.1:29476963 chr01:029476963 0 W/29476963-29476963 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.947418;DP=4786;DP4=2102,2406,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39448e-09;MQSB=0.950196;RPB=0.948928;SGB=-35.7104;VDB=0.611318;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.1:29482990 chr01:029482990 0 W/29482990-29482990 FN731-S Single Base Substitution G-A INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN4224-S.SNP.1:29487036 chr01:029487036 0 W/29487036-29487036 FN4224-S SNP C -> T AC=1;AN=170;BQB=0.818678;DP=2738;DP4=1407,1265,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.30923e-10;MQSB=0.975171;RPB=0.490365;SGB=70.0854;VDB=0.703566;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M417I|985|LOC_Os01g51290|protein_coding|CODING|LOC_Os01g51290.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M168I|736|LOC_Os01g51290|protein_coding|CODING|LOC_Os01g51290.2|6|1) FN-163.SNP.1:29491675 chr01:029491675 0 W/29491675-29491675 FN-163 Single Base Substitution T-C INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2089-S.SNP.1:29494400 chr01:029494400 0 W/29494400-29494400 FN2089-S SNP A -> T AC=2;AN=168;BQB=0.0104672;DP=3990;DP4=2265,1622,24,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.83145e-11;MQSB=0.515019;RPB=0.314356;SGB=-46.9043;VDB=0.112009;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.1:29494400 chr01:029494400 0 W/29494400-29494400 FN2530-S SNP A -> T AC=1;AN=198;BQB=0.483537;DP=4152;DP4=2217,1750,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26739e-07;MQSB=0.0155663;RPB=0.551633;SGB=-15.026;VDB=0.714325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.1:29496420 chr01:029496420 0 W/29496420-29496420 FN2310 SNP G -> A AC=1;AN=192;BQB=0.985741;DP=4685;DP4=1853,2588,18,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000426894;MQB=1.24808e-23;MQSB=0.858091;RPB=0.973036;SGB=43.3348;VDB=0.165911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.1:29497419 chr01:029497419 0 W/29497419-29497419 FN2667-S SNP A -> G AC=2;AN=200;BQB=0.532512;DP=4760;DP4=2316,2192,14,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.15628e-17;MQSB=0.965855;RPB=0.598374;SGB=-42.8173;VDB=0.580471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.1:29501238 chr01:029501238 0 W/29501238-29501238 FN2376 SNP C -> T AC=1;AN=192;BQB=0.516845;DP=5174;DP4=2323,2421,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000104226;MQSB=0.976369;RPB=0.48438;SGB=-15.8974;VDB=0.236544;EFF=UTR_5_PRIME(MODIFIER||53||462|LOC_Os01g51300|protein_coding|CODING|LOC_Os01g51300.1|1|1),UTR_5_PRIME(MODIFIER||53||453|LOC_Os01g51300|protein_coding|CODING|LOC_Os01g51300.2|1|1) FN3567-S.SNP.1:29504352 chr01:029504352 0 W/29504352-29504352 FN3567-S SNP A -> G AC=1;AN=188;BQB=0.923233;DP=2586;DP4=1213,1309,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.60645e-09;MQSB=0.989095;RPB=0.630418;SGB=58.0655;VDB=0.248144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K229R|462|LOC_Os01g51300|protein_coding|CODING|LOC_Os01g51300.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K220R|453|LOC_Os01g51300|protein_coding|CODING|LOC_Os01g51300.2|8|1) FN2558-S.SNP.1:29509201 chr01:029509201 0 W/29509201-29509201 FN2558-S SNP G -> T AC=1;AN=198;BQB=0.967327;DP=4270;DP4=1733,2318,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.1475e-11;MQSB=0.935142;RPB=0.999661;SGB=86.3098;VDB=0.205716;EFF=UTR_3_PRIME(MODIFIER||55||267|LOC_Os01g51310|protein_coding|CODING|LOC_Os01g51310.1|1|1) FN3939-S.SNP.1:29528523 chr01:029528523 0 W/29528523-29528523 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.989599;DP=2596;DP4=1433,1069,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.00257e-05;MQSB=0.719794;RPB=0.920698;SGB=38.3284;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-1.SNP.1:29531898 chr01:029531898 0 W/29531898-29531898 FN_398-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g51360 lipase, putative, expressed SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN-67.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN-67 Single Base Substitution G-A INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN1401-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN1401-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2432.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN2432 SNP G -> A AC=2;AN=200;BQB=0.287822;DP=5199;DP4=2355,2468,24,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.19756e-22;MQSB=0.999884;RPB=0.562561;SGB=126.794;VDB=0.608045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN3456-S SNP G -> A AC=1;AN=184;BQB=0.970532;DP=2472;DP4=1036,1303,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36785e-05;MQSB=0.937392;RPB=0.788386;SGB=30.6558;VDB=0.50952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN3998-S SNP G -> A AC=2;AN=168;BQB=0.923693;DP=2557;DP4=1120,1286,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.74622e-15;MQSB=0.710204;RPB=0.199774;SGB=96.5026;VDB=0.463652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.964772;DP=2381;DP4=1045,1220,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.02977e-05;MQSB=0.999683;RPB=0.999999;SGB=21.1076;VDB=0.268796;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN432-S Single Base Substitution G-A INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN533-S.SNP.1:29542577 chr01:029542577 0 W/29542577-29542577 FN533-S Single Base Substitution G-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2418.SNP.1:29545245 chr01:029545245 0 W/29545245-29545245 FN2418 SNP G -> C AC=1;AN=200;BQB=0.574383;DP=4230;DP4=2148,1814,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.68471e-09;MQSB=0.647324;RPB=0.928501;SGB=21.6694;VDB=0.499111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D160H|505|LOC_Os01g51390|protein_coding|CODING|LOC_Os01g51390.1|1|1) FN-88.SNP.1:29545954 chr01:029545954 0 W/29545954-29545954 FN-88 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g51390 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN4305-S.SNP.1:29549358 chr01:029549358 0 W/29549358-29549358 FN4305-S SNP G -> A AC=1;AN=170;BQB=0.999762;DP=2264;DP4=1215,979,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.39152e-08;MQSB=0.93544;RPB=0.978294;SGB=47.8722;VDB=0.662411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.1:29549655 chr01:029549655 0 W/29549655-29549655 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.986939;DP=4942;DP4=2106,2491,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.77626e-11;MQSB=0.972061;RPB=0.539729;SGB=81.8956;VDB=0.340176;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.1:29565703 chr01:029565703 0 W/29565703-29565703 FN3466-S SNP T -> A AC=1;AN=184;BQB=0.987287;DP=2814;DP4=1278,1453,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22441e-12;MQSB=0.948659;RPB=0.997476;SGB=93.9603;VDB=0.191274;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C937S|1033|LOC_Os01g51410|protein_coding|CODING|LOC_Os01g51410.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C895S|991|LOC_Os01g51410|protein_coding|CODING|LOC_Os01g51410.2|12|1) FN-279.SNP.1:29573238 chr01:029573238 0 W/29573238-29573238 FN-279 Single Base Substitution T-C INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2692-S.SNP.1:29586615 chr01:029586615 0 W/29586615-29586615 FN2692-S SNP C -> T AC=2;AN=200;BQB=0.852967;DP=4595;DP4=2228,2111,15,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.3644e-18;MQSB=0.91198;RPB=0.862891;SGB=155.578;VDB=0.925424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.1:29587106 chr01:029587106 0 W/29587106-29587106 FN2557-S SNP G -> A AC=1;AN=198;BQB=0.995857;DP=3495;DP4=1672,1646,1,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.75448e-07;MQSB=0.966983;RPB=0.987612;SGB=44.9538;VDB=0.0894614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.1:29587425 chr01:029587425 0 W/29587425-29587425 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.0986107;DP=4031;DP4=2000,1671,20,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.97442e-15;MQSB=0.787779;RPB=0.967681;SGB=64.5217;VDB=0.0168518;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S67L|132|LOC_Os01g51480|protein_coding|CODING|LOC_Os01g51480.1|2|1) FN622-S.SNP.1:29589668 chr01:029589668 0 W/29589668-29589668 FN622-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g51490 expressed protein SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN4103-S.SNP.1:29594853 chr01:029594853 0 W/29594853-29594853 FN4103-S SNP G -> A AC=1;AN=182;BQB=0.937807;DP=3028;DP4=1654,1308,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.65275e-06;MQSB=0.999474;RPB=0.972595;SGB=30.5793;VDB=0.528538;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.1:29594985 chr01:029594985 0 W/29594985-29594985 FN391-S Single Base Substitution A-G INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4050-S.SNP.1:29595932 chr01:029595932 0 W/29595932-29595932 FN4050-S SNP C -> A AC=1;AN=168;BQB=0.771892;DP=3196;DP4=1474,1600,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42166e-12;MQSB=0.999671;RPB=0.748425;SGB=72.4869;VDB=0.0452455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.1:29604674 chr01:029604674 0 W/29604674-29604674 FN2468 SNP A -> G AC=1;AN=200;BQB=0.190195;DP=4861;DP4=2156,2360,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.51445e-06;MQSB=0.945643;RPB=0.772688;SGB=34.6953;VDB=0.0987075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.1:29606179 chr01:029606179 0 W/29606179-29606179 FN2792-S SNP G -> A AC=1;AN=198;BQB=0.999889;DP=3667;DP4=1883,1550,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.23692e-14;MQSB=0.772995;RPB=0.999287;SGB=104.69;VDB=0.671843;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L69|312|LOC_Os01g51540|protein_coding|CODING|LOC_Os01g51540.1|1|1) FN3721-S.SNP.1:29607748 chr01:029607748 0 W/29607748-29607748 FN3721-S SNP C -> T AC=1;AN=190;BQB=0.627677;DP=2649;DP4=1256,1305,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.4544e-07;MQSB=0.999855;RPB=0.968142;SGB=46.7622;VDB=0.99687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.1:29618090 chr01:029618090 0 W/29618090-29618090 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.923512;DP=5192;DP4=2100,2881,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.60445e-09;MQSB=0.949111;RPB=0.894096;SGB=40.2696;VDB=0.176107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.1:29622959 chr01:029622959 0 W/29622959-29622959 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.991128;DP=4066;DP4=1697,2009,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000491884;MQB=1.19023e-10;MQSB=0.494173;RPB=0.925671;SGB=76.4186;VDB=0.91943;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A12T|192|LOC_Os01g51580|protein_coding|CODING|LOC_Os01g51580.1|1|1) FN2312.SNP.1:29623235 chr01:029623235 0 W/29623235-29623235 FN2312 SNP C -> T AC=1;AN=192;BQB=0.971123;DP=4535;DP4=2455,1708,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=7.471e-11;MQSB=0.316229;RPB=0.991846;SGB=-41.8626;VDB=0.0961692;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.1:29623705 chr01:029623705 0 W/29623705-29623705 FN956-S Single Base Substitution G-A INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2245-S.SNP.1:29626802 chr01:029626802 0 W/29626802-29626802 FN2245-S SNP C -> T AC=1;AN=190;BQB=0.407259;DP=4508;DP4=2305,1884,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00543713;MQSB=0.464555;RPB=0.465373;SGB=14.7784;VDB=0.276556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.1:29629311 chr01:029629311 0 W/29629311-29629311 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.414847;DP=4258;DP4=2167,1824,9,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00117426;MQB=8.12653e-08;MQSB=3.2802e-34;RPB=0.100867;SGB=69.1109;VDB=0.192806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.1:29637203 chr01:029637203 0 W/29637203-29637203 FN2254-S SNP C -> T AC=1;AN=190;BQB=0.00771564;DP=4947;DP4=2277,2129,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46235e-11;MQSB=0.908752;RPB=0.48408;SGB=-88.76;VDB=0.660785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.1:29637360 chr01:029637360 0 W/29637360-29637360 FN2310 SNP G -> A AC=1;AN=192;BQB=0.893383;DP=4845;DP4=2067,2421,10,29;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.15107e-19;MQSB=0.992368;RPB=0.962432;SGB=-45.3478;VDB=0.414625;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.1:29650252 chr01:029650252 0 W/29650252-29650252 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3846-S.SNP.1:29655660 chr01:029655660 0 W/29655660-29655660 FN3846-S SNP A -> C AC=1;AN=190;BQB=0.988914;DP=2540;DP4=1192,1250,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68134e-08;MQSB=0.99817;RPB=0.502201;SGB=67.3108;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.1:29659695 chr01:029659695 0 W/29659695-29659695 FN661-S Single Base Substitution C-G INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2462.SNP.1:29673077 chr01:029673077 0 W/29673077-29673077 FN2462 SNP C -> A AC=1;AN=200;BQB=0.647868;DP=5132;DP4=2444,2447,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56196e-08;MQSB=0.987793;RPB=0.689331;SGB=36.6644;VDB=0.760401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G126W|525|LOC_Os01g51634|protein_coding|CODING|LOC_Os01g51634.1|4|1) FN-303.SNP.1:29673545 chr01:029673545 0 W/29673545-29673545 FN-303 Single Base Substitution C-T INTRON HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN1270-S.SNP.1:29675646 chr01:029675646 0 W/29675646-29675646 FN1270-S Single Base Substitution C-A INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1449-S.SNP.1:29678802 chr01:029678802 0 W/29678802-29678802 FN1449-S Single Base Substitution G-A INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN4181-S.SNP.1:29679981 chr01:029679981 0 W/29679981-29679981 FN4181-S SNP G -> A AC=1;AN=170;BQB=0.953841;DP=2516;DP4=1157,1295,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.17266e-07;MQSB=0.998404;RPB=0.936205;SGB=12.556;VDB=0.24616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R982C|1153|LOC_Os01g51640|protein_coding|CODING|LOC_Os01g51640.1|2|1) FN2401.SNP.1:29682618 chr01:029682618 0 W/29682618-29682618 FN2401 SNP G -> T AC=2;AN=200;BQB=0.00401279;DP=3979;DP4=1567,2139,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27189e-17;MQSB=0.0478781;RPB=0.391104;SGB=169.394;VDB=0.277671;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P131|1153|LOC_Os01g51640|protein_coding|CODING|LOC_Os01g51640.1|1|1) FN1536-S.SNP.1:29686037 chr01:029686037 0 W/29686037-29686037 FN1536-S Single Base Substitution C-T INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-264.SNP.1:29689314 chr01:029689314 0 W/29689314-29689314 FN-264 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g51650 retrotransposon protein, putative, unclassified, expressed SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN1213-S.SNP.1:29692347 chr01:029692347 0 W/29692347-29692347 FN1213-S Single Base Substitution C-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN948-S.SNP.1:29694740 chr01:029694740 0 W/29694740-29694740 FN948-S Single Base Substitution T-A INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3460-S.SNP.1:29699213 chr01:029699213 0 W/29699213-29699213 FN3460-S SNP T -> C AC=1;AN=184;BQB=0.992672;DP=2966;DP4=1277,1531,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0266352;MQB=0.010007;MQSB=0.0627094;RPB=0.99584;SGB=10.6662;VDB=0.762398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.1:29700875 chr01:029700875 0 W/29700875-29700875 FN2419 SNP G -> A AC=1;AN=200;BQB=0.902253;DP=4628;DP4=2289,2136,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.6658e-09;MQSB=0.8072;RPB=0.411057;SGB=58.8698;VDB=0.839565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.1:29701293 chr01:029701293 0 W/29701293-29701293 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3579-S.SNP.1:29701376 chr01:029701376 0 W/29701376-29701376 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.216116;DP=4172;DP4=2582,1491,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000479386;MQB=8.58316e-05;MQSB=0.157831;RPB=0.983295;SGB=43.0708;VDB=0.219508;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.1:29705460 chr01:029705460 0 W/29705460-29705460 FN1286-S Single Base Substitution T-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN832-S.SNP.1:29709421 chr01:029709421 0 W/29709421-29709421 FN832-S Single Base Substitution C-A INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN-107.SNP.1:29715640 chr01:029715640 0 W/29715640-29715640 FN-107 Single Base Substitution C-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1423-S.SNP.1:29717765 chr01:029717765 0 W/29717765-29717765 FN1423-S Single Base Substitution G-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1001-S.SNP.1:29725764 chr01:029725764 0 W/29725764-29725764 FN1001-S Single Base Substitution A-C INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2160-S.SNP.1:29749727 chr01:029749727 0 W/29749727-29749727 FN2160-S SNP C -> G AC=1;AN=168;BQB=0.416975;DP=1132;DP4=570,525,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00265018;MQB=0.037668;MQSB=7.8575e-10;RPB=0.872041;SGB=7.59999;VDB=0.880537;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.1:29749815 chr01:029749815 0 W/29749815-29749815 FN-149 Single Base Substitution A-T INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1527-S.SNP.1:29752308 chr01:029752308 0 W/29752308-29752308 FN1527-S Single Base Substitution C-T INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1527-S.SNP.1:29752364 chr01:029752364 0 W/29752364-29752364 FN1527-S Single Base Substitution C-T INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN594-S.SNP.1:29757198 chr01:029757198 0 W/29757198-29757198 FN594-S Single Base Substitution C-T INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN4166-S.SNP.1:29758727 chr01:029758727 0 W/29758727-29758727 FN4166-S SNP T -> C AC=2;AN=170;BQB=0.960184;DP=2401;DP4=1005,1297,10,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.36383e-10;MQSB=0.928965;RPB=0.137979;SGB=52.0913;VDB=0.388682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.1:29765020 chr01:029765020 0 W/29765020-29765020 FN2233-S SNP G -> A AC=1;AN=190;BQB=0.935681;DP=5103;DP4=2537,2286,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65235e-09;MQSB=0.756853;RPB=0.940235;SGB=-13.222;VDB=0.235156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D153N|561|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D153N|515|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D331N|419|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.3|5|1) FN3057-S.SNP.1:29765587 chr01:029765587 0 W/29765587-29765587 FN3057-S SNP G -> C AC=1;AN=184;BQB=0.861767;DP=2918;DP4=1378,1445,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.76948e-05;MQSB=0.646401;RPB=0.854796;SGB=62.3078;VDB=0.201589;EFF=UTR_3_PRIME(MODIFIER||298||419|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.3|5|1),INTRON(MODIFIER||||561|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.1|5|1),INTRON(MODIFIER||||515|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.2|5|1) FN3848-S.SNP.1:29766504 chr01:029766504 0 W/29766504-29766504 FN3848-S SNP T -> C AC=1;AN=158;BQB=0.77318;DP=2516;DP4=1257,1060,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.9272e-06;MQSB=0.831598;RPB=0.907159;SGB=2.08615;VDB=0.189068;EFF=INTRON(MODIFIER||||561|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.1|5|1),INTRON(MODIFIER||||515|LOC_Os01g51754|protein_coding|CODING|LOC_Os01g51754.2|5|1) FN1114-S.SNP.1:29775991 chr01:029775991 0 W/29775991-29775991 FN1114-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN412-S.SNP.1:29776524 chr01:029776524 0 W/29776524-29776524 FN412-S Single Base Substitution G-A INTRON HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN442-S.SNP.1:29802655 chr01:029802655 0 W/29802655-29802655 FN442-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g51840 IQ calmodulin-binding motif family protein, putative, expressed SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN3535-S.SNP.1:29806978 chr01:029806978 0 W/29806978-29806978 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.955096;DP=2859;DP4=1197,1594,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30493e-06;MQSB=0.630064;RPB=0.676199;SGB=35.3493;VDB=0.664517;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.1:29807341 chr01:029807341 0 W/29807341-29807341 FN4001-S SNP G -> C AC=1;AN=168;BQB=0.396904;DP=2685;DP4=1337,1260,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13086e-06;MQSB=0.695428;RPB=0.93137;SGB=24.6155;VDB=0.72051;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.1:29812226 chr01:029812226 0 W/29812226-29812226 FN795-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g51850 expressed protein SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1122-S.SNP.1:29820149 chr01:029820149 0 W/29820149-29820149 FN1122-S Single Base Substitution C-T INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1048-S.SNP.1:29820835 chr01:029820835 0 W/29820835-29820835 FN1048-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g51870 methyltransferase, putative, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN2420.SNP.1:29822248 chr01:029822248 0 W/29822248-29822248 FN2420 SNP G -> A AC=1;AN=200;BQB=0.201459;DP=4710;DP4=1977,2497,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51715e-12;MQSB=0.943417;RPB=0.0638233;SGB=86.5007;VDB=0.51241;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN-207 Single Base Substitution G-A INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-338.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN-338 Single Base Substitution G-A INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2680-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN2680-S SNP G -> A AC=2;AN=200;BQB=0.491797;DP=4513;DP4=2216,1953,39,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.86518e-31;MQSB=0.99393;RPB=0.850058;SGB=134.561;VDB=0.959806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN3400-S SNP G -> A AC=1;AN=184;BQB=0.956285;DP=2801;DP4=1372,1327,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4716e-05;MQSB=0.978102;RPB=0.946073;SGB=30.6558;VDB=0.121126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.901128;DP=2679;DP4=1346,1204,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38375e-09;MQSB=0.92705;RPB=0.983606;SGB=23.6597;VDB=0.902672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN4114-S SNP G -> A AC=2;AN=182;BQB=0.904791;DP=2891;DP4=1582,1210,6,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.13742e-14;MQSB=0.780928;RPB=0.999892;SGB=98.2417;VDB=0.489328;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.96838;DP=2454;DP4=1331,1030,16,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.43607e-14;MQSB=0.988455;RPB=0.190327;SGB=110.069;VDB=0.469024;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.1:29824040 chr01:029824040 0 W/29824040-29824040 FN713-S Single Base Substitution G-A INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN4149-S.SNP.1:29824659 chr01:029824659 0 W/29824659-29824659 FN4149-S SNP A -> T AC=1;AN=170;BQB=0.956341;DP=2555;DP4=1422,1025,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.11757e-06;MQSB=0.999413;RPB=0.985967;SGB=34.5445;VDB=0.236034;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.1:29825753 chr01:029825753 0 W/29825753-29825753 FN863-S Single Base Substitution T-C INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2152-S.SNP.1:29835432 chr01:029835432 0 W/29835432-29835432 FN2152-S SNP C -> A AC=2;AN=168;BQB=0.771316;DP=4025;DP4=1751,2215,23,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.59486e-27;MQSB=0.976435;RPB=0.732496;SGB=-112.005;VDB=0.257711;EFF=INTRON(MODIFIER||||676|LOC_Os01g51890|protein_coding|CODING|LOC_Os01g51890.1|9|1) FN3339-S.SNP.1:29836469 chr01:029836469 0 W/29836469-29836469 FN3339-S SNP A -> C AC=2;AN=184;BQB=0.989185;DP=2852;DP4=944,1471,14,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000350631;MQB=9.13375e-10;MQSB=0.65703;RPB=0.723378;SGB=-11.5833;VDB=0.311161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.1:29842025 chr01:029842025 0 W/29842025-29842025 FN1600-S Single Base Substitution A-T INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1515-S.SNP.1:29842797 chr01:029842797 0 W/29842797-29842797 FN1515-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN502-S.SNP.1:29844833 chr01:029844833 0 W/29844833-29844833 FN502-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g51920 phosphotransferase, putative, expressed SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2609-S.SNP.1:29847766 chr01:029847766 0 W/29847766-29847766 FN2609-S SNP A -> G AC=1;AN=198;BQB=0.995741;DP=3813;DP4=1758,1772,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.69606e-09;MQSB=0.619421;RPB=0.862104;SGB=31.9395;VDB=0.848683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.1:29848680 chr01:029848680 0 W/29848680-29848680 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.99655;DP=3165;DP4=1225,1799,12,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.64008e-12;MQSB=0.992405;RPB=0.522346;SGB=71.1374;VDB=0.209278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN2107-S SNP G -> T AC=1;AN=168;BQB=0.613433;DP=3525;DP4=2066,1417,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0334752;MQB=0.911714;MQSB=5.65689e-05;RPB=0.82728;SGB=-37.2282;VDB=0.557826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN2181-S SNP G -> T AC=2;AN=190;BQB=0.231712;DP=5075;DP4=2376,2308,21,27;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0122167;MQB=0.787276;MQSB=0.0123109;RPB=0.258495;SGB=107.938;VDB=0.658796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN2312 SNP G -> T AC=1;AN=192;BQB=0.149651;DP=5153;DP4=2524,2304,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0108675;MQB=0.810048;MQSB=0.71143;RPB=0.985576;SGB=67.4678;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN2692-S SNP G -> T AC=2;AN=200;BQB=0.966892;DP=4982;DP4=2502,2196,21,22;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0116419;MQB=0.940077;MQSB=0.370412;RPB=0.588934;SGB=192.42;VDB=0.390097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN3520-S SNP G -> T AC=2;AN=188;BQB=0.986311;DP=3014;DP4=1459,1451,20,19;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.013935;MQB=0.89619;MQSB=0.913703;RPB=0.960814;SGB=171.648;VDB=0.319606;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN4204-S SNP G -> T AC=1;AN=170;BQB=0.941392;DP=2702;DP4=1326,1291,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0177646;MQB=0.708591;MQSB=0.153266;RPB=0.919806;SGB=61.2001;VDB=0.395459;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.1:29857391 chr01:029857391 0 W/29857391-29857391 FN566-S Single Base Substitution G-T INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN_769-4-1.SNP.1:29860971 chr01:029860971 0 W/29860971-29860971 FN_769-4-1 Single Base Substitution T-G Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN-169.SNP.1:29881343 chr01:029881343 0 W/29881343-29881343 FN-169 Single Base Substitution C-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3301-S.SNP.1:29889976 chr01:029889976 0 W/29889976-29889976 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.991312;DP=3299;DP4=1404,1786,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.3617e-11;MQSB=0.949014;RPB=0.998516;SGB=71.3514;VDB=0.431111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.1:29891551 chr01:029891551 0 W/29891551-29891551 FN2734-S SNP T -> C AC=1;AN=200;BQB=0.791864;DP=5727;DP4=2598,2961,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43844e-09;MQSB=0.811346;RPB=0.376849;SGB=26.8797;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.1:29892130 chr01:029892130 0 W/29892130-29892130 FN1264-S Single Base Substitution A-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1522-S.SNP.1:29900476 chr01:029900476 0 W/29900476-29900476 FN1522-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g52020 subtilase, putative, expressed SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN2398.SNP.1:29906851 chr01:029906851 0 W/29906851-29906851 FN2398 SNP C -> T AC=1;AN=200;BQB=0.610669;DP=4557;DP4=2009,2284,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.84062e-09;MQSB=0.993242;RPB=0.477892;SGB=77.2904;VDB=0.440254;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.1:29907667 chr01:029907667 0 W/29907667-29907667 FN482-S Single Base Substitution T-C INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN973-S.SNP.1:29907957 chr01:029907957 0 W/29907957-29907957 FN973-S Single Base Substitution G-T INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN883-S.SNP.1:29910189 chr01:029910189 0 W/29910189-29910189 FN883-S Single Base Substitution C-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3790-S.SNP.1:29913921 chr01:029913921 0 W/29913921-29913921 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.937077;DP=2817;DP4=942,1777,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.64357e-06;MQSB=0.782728;RPB=0.893147;SGB=35.4339;VDB=0.390068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.1:29914835 chr01:029914835 0 W/29914835-29914835 FN3496-S SNP T -> C AC=1;AN=188;BQB=0.916414;DP=2599;DP4=1225,1234,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.30818e-07;MQSB=0.999322;RPB=0.965518;SGB=39.8925;VDB=0.327895;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.1:29918024 chr01:029918024 0 W/29918024-29918024 FN4082-S SNP A -> T AC=2;AN=182;BQB=0.928926;DP=2856;DP4=1465,1306,27,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00035014;MQB=1.31766e-24;MQSB=0.747893;RPB=0.280336;SGB=174.926;VDB=0.730783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.1:29918479 chr01:029918479 0 W/29918479-29918479 FN3710-S SNP C -> A AC=2;AN=190;BQB=0.575929;DP=2842;DP4=1358,1338,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.79139e-13;MQSB=0.977059;RPB=0.989431;SGB=49.1985;VDB=0.959518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.1:29919877 chr01:029919877 0 W/29919877-29919877 FN2470 SNP C -> T AC=1;AN=200;BQB=0.495329;DP=4850;DP4=2212,2308,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12237e-11;MQSB=0.948017;RPB=0.991642;SGB=-66.6795;VDB=0.13955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.1:29925510 chr01:029925510 0 W/29925510-29925510 FN3767-S SNP C -> A AC=1;AN=190;BQB=0.999987;DP=2764;DP4=1307,1358,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55528e-08;MQSB=0.903332;RPB=0.931186;SGB=62.7569;VDB=0.809638;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.1:29935841 chr01:029935841 0 W/29935841-29935841 FN4117-S SNP T -> C AC=1;AN=182;BQB=0.93895;DP=3431;DP4=1772,1495,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.34125e-11;MQSB=0.979252;RPB=0.571291;SGB=28.1658;VDB=0.587726;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.1:29950695 chr01:029950695 0 W/29950695-29950695 FN449-S Single Base Substitution A-G INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN561-S.SNP.1:29952476 chr01:029952476 0 W/29952476-29952476 FN561-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g52090 transcription factor like protein, putative, expressed SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN-59.SNP.1:29954040 chr01:029954040 0 W/29954040-29954040 FN-59 Single Base Substitution G-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3343-S.SNP.1:29957448 chr01:029957448 0 W/29957448-29957448 FN3343-S SNP G -> T AC=1;AN=184;BQB=0.999782;DP=3454;DP4=1493,1843,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.43774e-08;MQSB=0.956359;RPB=0.9903;SGB=23.2751;VDB=0.327568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.1:29959208 chr01:029959208 0 W/29959208-29959208 FN2358 SNP C -> G AC=2;AN=192;BQB=0.435045;DP=4755;DP4=2586,1913,22,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.14726e-20;MQSB=0.997922;RPB=0.0249649;SGB=-2.91736;VDB=0.129998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.1:29971392 chr01:029971392 0 W/29971392-29971392 FN3473-S SNP C -> T AC=1;AN=184;BQB=0.846436;DP=3121;DP4=2005,1027,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.89938e-08;MQSB=0.886012;RPB=0.759983;SGB=53.2642;VDB=0.782957;EFF=UTR_5_PRIME(MODIFIER||165||112|LOC_Os01g52120|protein_coding|CODING|LOC_Os01g52120.1|1|1) FN4030-S.SNP.1:29974660 chr01:029974660 0 W/29974660-29974660 FN4030-S SNP T -> A AC=1;AN=168;BQB=0.842968;DP=2475;DP4=1127,1242,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.41959e-06;MQSB=0.936217;RPB=0.230217;SGB=52.1728;VDB=0.815914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.1:29975787 chr01:029975787 0 W/29975787-29975787 FN1527-S Single Base Substitution C-A INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1061-S.SNP.1:29977604 chr01:029977604 0 W/29977604-29977604 FN1061-S Single Base Substitution A-G INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1648-S.SNP.1:29980392 chr01:029980392 0 W/29980392-29980392 FN1648-S Single Base Substitution T-G INTERGENIC HET SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN817-S.SNP.1:29982846 chr01:029982846 0 W/29982846-29982846 FN817-S Single Base Substitution C-A INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3509-S.SNP.1:29990181 chr01:029990181 0 W/29990181-29990181 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.200963;DP=3122;DP4=1633,1374,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000124239;MQSB=0.76966;RPB=0.92082;SGB=10.8165;VDB=0.585652;EFF=INTRON(MODIFIER||||666|LOC_Os01g52130|protein_coding|CODING|LOC_Os01g52130.1|3|1) FN770-S.SNP.1:29990658 chr01:029990658 0 W/29990658-29990658 FN770-S Single Base Substitution G-A INTRON HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN671-S.SNP.1:29997435 chr01:029997435 0 W/29997435-29997435 FN671-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2431.SNP.1:30004291 chr01:030004291 0 W/30004291-30004291 FN2431 SNP C -> G AC=2;AN=200;BQB=0.0919169;DP=4569;DP4=2013,2127,24,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.98605e-15;MQSB=0.879136;RPB=0.923478;SGB=-251.213;VDB=0.601661;EFF=INTRON(MODIFIER||||142|LOC_Os01g52160|protein_coding|CODING|LOC_Os01g52160.1|2|1) FN2485.SNP.1:30010551 chr01:030010551 0 W/30010551-30010551 FN2485 SNP G -> A AC=1;AN=200;BQB=0.563101;DP=5213;DP4=2540,2347,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.53675e-19;MQSB=0.983123;RPB=0.933457;SGB=60.747;VDB=0.493995;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G357|531|LOC_Os01g52170|protein_coding|CODING|LOC_Os01g52170.1|10|1) FN2485.SNP.1:30010552 chr01:030010552 0 W/30010552-30010552 FN2485 SNP C -> A AC=1;AN=200;BQB=0.993985;DP=5207;DP4=2563,2353,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.64607e-19;MQSB=0.999786;RPB=0.996428;SGB=94.3471;VDB=0.376567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q358K|531|LOC_Os01g52170|protein_coding|CODING|LOC_Os01g52170.1|10|1) FN1265-S.SNP.1:30016585 chr01:030016585 0 W/30016585-30016585 FN1265-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3920-S.SNP.1:30018253 chr01:030018253 0 W/30018253-30018253 FN3920-S SNP C -> A AC=1;AN=158;BQB=0.868393;DP=2743;DP4=1226,1384,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.79408e-07;MQSB=0.937224;RPB=0.442318;SGB=30.704;VDB=0.822345;EFF=INTRON(MODIFIER||||156|LOC_Os01g52200|protein_coding|CODING|LOC_Os01g52200.1|1|1) FN4093-S.SNP.1:30035928 chr01:030035928 0 W/30035928-30035928 FN4093-S SNP G -> A AC=1;AN=182;BQB=0.953862;DP=2847;DP4=1310,1468,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.84474e-07;MQSB=0.823946;RPB=0.18499;SGB=25.0952;VDB=0.793292;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R633*|975|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.1|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R630*|972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.2|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R630*|972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.3|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R630*|972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.4|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R633*|943|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.5|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R633*|892|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.6|9|1);LOF=(LOC_Os01g52250|LOC_Os01g52250|6|1.00);NMD=(LOC_Os01g52250|LOC_Os01g52250|6|1.00) FN876-S.SNP.1:30037563 chr01:030037563 0 W/30037563-30037563 FN876-S Single Base Substitution A-T INTRON HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1436-S.SNP.1:30037773 chr01:030037773 0 W/30037773-30037773 FN1436-S Single Base Substitution A-C INTRON HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3942-S.SNP.1:30038217 chr01:030038217 0 W/30038217-30038217 FN3942-S SNP C -> T AC=1;AN=168;BQB=0.822112;DP=2658;DP4=1125,1404,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.19206e-07;MQSB=0.145396;RPB=0.613111;SGB=92.0501;VDB=0.55211;EFF=INTRON(MODIFIER||||972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.2|4|1),INTRON(MODIFIER||||972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.3|4|1),INTRON(MODIFIER||||972|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.4|4|1),INTRON(MODIFIER||||975|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.1|4|1),INTRON(MODIFIER||||943|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.5|4|1),INTRON(MODIFIER||||892|LOC_Os01g52250|protein_coding|CODING|LOC_Os01g52250.6|4|1) FN3575-S.SNP.1:30045761 chr01:030045761 0 W/30045761-30045761 FN3575-S SNP T -> G AC=1;AN=188;BQB=0.640856;DP=2724;DP4=1556,1093,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.34951e-09;MQSB=1;RPB=0.0317768;SGB=53.7007;VDB=0.67593;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.1:30046436 chr01:030046436 0 W/30046436-30046436 FN2542-S SNP T -> A AC=1;AN=198;BQB=0.123074;DP=4252;DP4=1799,1815,14,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=4.05686e-09;MQSB=0.112101;RPB=0.312022;SGB=37.1297;VDB=0.00359259;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.1:30047182 chr01:030047182 0 W/30047182-30047182 W385-6-8-4 Single Base Substitution C-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3991-S.SNP.1:30047808 chr01:030047808 0 W/30047808-30047808 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.995942;DP=2306;DP4=1241,991,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000114231;MQSB=0.835182;RPB=0.683792;SGB=25.5891;VDB=0.487912;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.1:30057106 chr01:030057106 0 W/30057106-30057106 FN723-S Single Base Substitution T-C INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN554-S.SNP.1:30057242 chr01:030057242 0 W/30057242-30057242 FN554-S Single Base Substitution A-T INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN969-S.SNP.1:30060579 chr01:030060579 0 W/30060579-30060579 FN969-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g52290 expressed protein SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN-356.SNP.1:30062284 chr01:030062284 0 W/30062284-30062284 FN-356 Single Base Substitution G-T INTERGENIC HOMO SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3778-S.SNP.1:30073551 chr01:030073551 0 W/30073551-30073551 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.579292;DP=2584;DP4=1380,1119,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.98783e-10;MQSB=0.824455;RPB=0.772136;SGB=99.1879;VDB=0.71477;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.1:30073941 chr01:030073941 0 W/30073941-30073941 FN-248 Single Base Substitution C-T INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3652-S.SNP.1:30076991 chr01:030076991 0 W/30076991-30076991 FN3652-S SNP A -> T AC=1;AN=190;BQB=0.889012;DP=2628;DP4=1204,1277,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.7035e-07;MQSB=0.993832;RPB=0.296087;SGB=28.9929;VDB=0.386007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K456N|500|LOC_Os01g52330|protein_coding|CODING|LOC_Os01g52330.1|1|1) FN3286-S.SNP.1:30086750 chr01:030086750 0 W/30086750-30086750 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.968702;DP=2767;DP4=1295,1391,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62059e-06;MQSB=0.868557;RPB=0.674934;SGB=48.7425;VDB=0.617065;EFF=INTRON(MODIFIER||||181|LOC_Os01g52370|protein_coding|CODING|LOC_Os01g52370.1|1|1) FN3698-S.SNP.1:30088689 chr01:030088689 0 W/30088689-30088689 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.79518;DP=2446;DP4=1314,1025,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0760425;MQB=0.168736;MQSB=4.58026e-08;RPB=0.458041;SGB=25.439;VDB=0.150505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G42R|181|LOC_Os01g52370|protein_coding|CODING|LOC_Os01g52370.1|1|1) FN1212-S.SNP.1:30089231 chr01:030089231 0 W/30089231-30089231 FN1212-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN975-S.SNP.1:30096978 chr01:030096978 0 W/30096978-30096978 FN975-S Single Base Substitution T-A INTRON HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2630-S.SNP.1:30107838 chr01:030107838 0 W/30107838-30107838 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.981451;DP=4680;DP4=2177,2284,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57355e-15;MQSB=0.918763;RPB=0.419486;SGB=-38.869;VDB=0.784028;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.1:30108577 chr01:030108577 0 W/30108577-30108577 FN972-S Single Base Substitution G-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN_812-4-1.SNP.1:30116514 chr01:030116514 0 W/30116514-30116514 FN_812-4-1 Single Base Substitution C-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2457.SNP.1:30119820 chr01:030119820 0 W/30119820-30119820 FN2457 SNP C -> A AC=1;AN=200;BQB=0.992231;DP=3755;DP4=1646,1842,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00577e-10;MQSB=0.947173;RPB=0.63674;SGB=9.48993;VDB=0.288302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.1:30122476 chr01:030122476 0 W/30122476-30122476 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.999197;DP=3708;DP4=1543,2006,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.00993e-08;MQSB=0.835081;RPB=0.778344;SGB=39.6545;VDB=0.90439;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.1:30158156 chr01:030158156 0 W/30158156-30158156 FN888-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN-401.SNP.1:30162565 chr01:030162565 0 W/30162565-30162565 FN-401 Single Base Substitution T-C INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN811-S.SNP.1:30163569 chr01:030163569 0 W/30163569-30163569 FN811-S Single Base Substitution C-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2447.SNP.1:30164205 chr01:030164205 0 W/30164205-30164205 FN2447 SNP C -> G AC=1;AN=200;BQB=0.948225;DP=4970;DP4=2392,2246,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.2133e-08;MQSB=0.857801;RPB=0.243524;SGB=47.4799;VDB=0.129671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.1:30165256 chr01:030165256 0 W/30165256-30165256 FN2163-S SNP T -> A AC=1;AN=168;BQB=0.934107;DP=3873;DP4=1853,1991,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91539e-08;MQSB=0.98212;RPB=0.319173;SGB=24.6155;VDB=0.737759;EFF=INTERGENIC(MODIFIER||||||||||1) FN4017-S.SNP.1:30180097 chr01:030180097 0 W/30180097-30180097 FN4017-S SNP T -> G AC=1;AN=168;BQB=0.966413;DP=2454;DP4=1073,1280,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.52659e-09;MQSB=0.797017;RPB=0.83371;SGB=41.6096;VDB=0.289748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.1:30190846 chr01:030190846 0 W/30190846-30190846 FN2779-S SNP G -> A AC=2;AN=198;BQB=0.989994;DP=4185;DP4=1829,2110,31,41;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.5442e-41;MQSB=0.986111;RPB=0.345683;SGB=319.669;VDB=0.495782;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q883*|1234|LOC_Os01g52550|protein_coding|CODING|LOC_Os01g52550.1|7|1);LOF=(LOC_Os01g52550|LOC_Os01g52550|1|1.00);NMD=(LOC_Os01g52550|LOC_Os01g52550|1|1.00) FN2426.SNP.1:30190887 chr01:030190887 0 W/30190887-30190887 FN2426 SNP A -> G AC=1;AN=200;BQB=0.708522;DP=4749;DP4=2026,2409,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04434e-09;MQSB=0.998402;RPB=0.52293;SGB=29.4849;VDB=0.589287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F869S|1234|LOC_Os01g52550|protein_coding|CODING|LOC_Os01g52550.1|7|1) FN2444.SNP.1:30192682 chr01:030192682 0 W/30192682-30192682 FN2444 SNP C -> A AC=2;AN=200;BQB=0.999938;DP=4844;DP4=2213,2330,18,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.47282e-29;MQSB=0.865958;RPB=0.865434;SGB=118.061;VDB=0.531986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V332F|1234|LOC_Os01g52550|protein_coding|CODING|LOC_Os01g52550.1|5|1) FN3776-S.SNP.1:30200730 chr01:030200730 0 W/30200730-30200730 FN3776-S SNP C -> A AC=1;AN=190;BQB=0.13588;DP=2515;DP4=1146,1239,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.91641e-05;MQSB=0.0153227;RPB=0.569948;SGB=4.11112;VDB=0.207007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.1:30205386 chr01:030205386 0 W/30205386-30205386 FN3500-S SNP T -> G AC=1;AN=188;BQB=0.206581;DP=2712;DP4=1355,1285,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.28688e-09;MQSB=0.965758;RPB=0.27933;SGB=10.1681;VDB=0.239622;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.1:30214974 chr01:030214974 0 W/30214974-30214974 FN1236-S Single Base Substitution T-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN4221-S.SNP.1:30232411 chr01:030232411 0 W/30232411-30232411 FN4221-S SNP G -> A AC=1;AN=170;BQB=0.537192;DP=2578;DP4=1162,1351,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.15166e-06;MQSB=0.988813;RPB=0.68438;SGB=56.7575;VDB=0.243468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3738-S.SNP.1:30235364 chr01:030235364 0 W/30235364-30235364 FN3738-S SNP G -> C AC=2;AN=190;BQB=0.376316;DP=3138;DP4=1573,1399,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.04763e-13;MQSB=0.97662;RPB=0.997003;SGB=96.5165;VDB=0.60534;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.1:30237907 chr01:030237907 0 W/30237907-30237907 FN961-S Single Base Substitution A-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN961-S.SNP.1:30237909 chr01:030237909 0 W/30237909-30237909 FN961-S Single Base Substitution G-C INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-166.SNP.1:30246359 chr01:030246359 0 W/30246359-30246359 FN-166 Single Base Substitution C-T INTRON HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3459-S.SNP.1:30246893 chr01:030246893 0 W/30246893-30246893 FN3459-S SNP G -> A AC=2;AN=184;BQB=0.988667;DP=2452;DP4=1193,1191,8,6;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00815661;MQB=0.00470652;MQSB=0.409588;RPB=0.581562;SGB=39.2697;VDB=0.412929;EFF=INTRON(MODIFIER||||204|LOC_Os01g52610|protein_coding|CODING|LOC_Os01g52610.1|2|1) FN1094-S.SNP.1:30260065 chr01:030260065 0 W/30260065-30260065 FN1094-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3733-S.SNP.1:30272059 chr01:030272059 0 W/30272059-30272059 FN3733-S SNP A -> C AC=2;AN=190;BQB=0.934801;DP=2991;DP4=1439,1437,12,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.75542e-09;MQSB=0.362153;RPB=0.97187;SGB=80.9724;VDB=0.70998;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.1:30288519 chr01:030288519 0 W/30288519-30288519 FN-263 Single Base Substitution C-A INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN752-S.SNP.1:30289698 chr01:030289698 0 W/30289698-30289698 FN752-S Single Base Substitution T-G INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2795-S.SNP.1:30290364 chr01:030290364 0 W/30290364-30290364 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.525138;DP=4194;DP4=1916,1894,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.79323e-08;MQSB=0.138374;RPB=0.869068;SGB=37.1297;VDB=0.435737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.1:30292384 chr01:030292384 0 W/30292384-30292384 FN1755-S SNP A -> G AC=1;AN=188;BQB=0.262922;DP=2873;DP4=1360,1464,22,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.38537e-14;MQSB=0.737619;RPB=0.989478;SGB=27.1443;VDB=0.924797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.1:30295316 chr01:030295316 0 W/30295316-30295316 FN3999-S SNP C -> T AC=1;AN=168;BQB=0.461129;DP=2446;DP4=1356,915,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00449714;MQB=0.0296727;MQSB=7.15872e-06;RPB=0.587941;SGB=7.59999;VDB=0.899786;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S407|662|LOC_Os01g52690|protein_coding|CODING|LOC_Os01g52690.1|2|1) FN2166-S.SNP.1:30298239 chr01:030298239 0 W/30298239-30298239 FN2166-S SNP T -> C AC=2;AN=168;BQB=0.0880418;DP=2345;DP4=1257,1031,14,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.89182e-11;MQSB=0.996717;RPB=0.946953;SGB=-10.2027;VDB=0.944459;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.1:30299983 chr01:030299983 0 W/30299983-30299983 FN3429-S SNP G -> C AC=1;AN=184;BQB=0.999792;DP=2675;DP4=1262,1343,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.04007e-07;MQSB=0.881932;RPB=0.663818;SGB=44.2207;VDB=0.977214;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.1:30305796 chr01:030305796 0 W/30305796-30305796 FN3424-S SNP C -> G AC=1;AN=184;BQB=0.725502;DP=2728;DP4=1472,1151,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.0398e-06;MQSB=0.656684;RPB=0.67734;SGB=62.3078;VDB=0.978709;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.1:30317848 chr01:030317848 0 W/30317848-30317848 FN3774-S SNP G -> T AC=2;AN=190;BQB=0.982648;DP=2378;DP4=1174,1128,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52453e-11;MQSB=0.138361;RPB=0.630954;SGB=90.0802;VDB=0.879387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.1:30318159 chr01:030318159 0 W/30318159-30318159 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1613-S.SNP.1:30320010 chr01:030320010 0 W/30320010-30320010 FN1613-S Single Base Substitution G-A INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN883-S.SNP.1:30327032 chr01:030327032 0 W/30327032-30327032 FN883-S Single Base Substitution G-C INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2582-S.SNP.1:30329863 chr01:030329863 0 W/30329863-30329863 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.9965;DP=4473;DP4=2045,2233,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.11748e-08;MQSB=0.5489;RPB=0.864499;SGB=26.7492;VDB=0.865484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.1:30336445 chr01:030336445 0 W/30336445-30336445 FN2545-S SNP A -> G AC=1;AN=198;BQB=0.836006;DP=4606;DP4=2261,2192,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.75834e-12;MQSB=0.741646;RPB=0.957782;SGB=65.3149;VDB=0.952909;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.1:30340374 chr01:030340374 0 W/30340374-30340374 FN4187-S SNP C -> A AC=2;AN=170;BQB=0.999409;DP=2708;DP4=1505,1133,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.09997e-12;MQSB=0.912369;RPB=0.802818;SGB=87.856;VDB=0.559559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E239D|259|LOC_Os01g52740|protein_coding|CODING|LOC_Os01g52740.1|3|1) FN4066-S.SNP.1:30340417 chr01:030340417 0 W/30340417-30340417 FN4066-S SNP A -> G AC=1;AN=168;BQB=0.773355;DP=2714;DP4=1297,1285,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.15896e-07;MQSB=0.98596;RPB=0.209641;SGB=43.3113;VDB=0.688637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V225A|259|LOC_Os01g52740|protein_coding|CODING|LOC_Os01g52740.1|3|1) FN848-S.SNP.1:30363536 chr01:030363536 0 W/30363536-30363536 FN848-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g52770 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2244-S.SNP.1:30368164 chr01:030368164 0 W/30368164-30368164 FN2244-S SNP C -> T AC=2;AN=190;BQB=0.979764;DP=4999;DP4=2150,2511,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41216e-17;MQSB=0.942391;RPB=0.322859;SGB=64.5217;VDB=0.0618746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M413I|1021|LOC_Os01g52780|protein_coding|CODING|LOC_Os01g52780.1|2|1) FN594-S.SNP.1:30374035 chr01:030374035 0 W/30374035-30374035 FN594-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g52790 cytochrome P450 72A1, putative, expressed SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3978-S.SNP.1:30377150 chr01:030377150 0 W/30377150-30377150 FN3978-S SNP C -> A AC=1;AN=168;BQB=0.486278;DP=3249;DP4=1736,1339,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8686e-06;MQSB=0.332571;RPB=0.860465;SGB=45.0404;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.1:30377657 chr01:030377657 0 W/30377657-30377657 FN3413-S SNP C -> T AC=2;AN=184;BQB=0.441029;DP=3266;DP4=1433,1672,24,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.5116e-16;MQSB=0.963274;RPB=0.983294;SGB=113.227;VDB=0.722974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.1:30385635 chr01:030385635 0 W/30385635-30385635 FN3551-S SNP T -> A AC=1;AN=188;BQB=0.500045;DP=3085;DP4=1451,1358,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000324149;MQB=4.19794e-07;MQSB=0.618118;RPB=0.837919;SGB=3.99491;VDB=0.761693;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.1:30411020 chr01:030411020 0 W/30411020-30411020 FN3421-S SNP G -> T AC=2;AN=184;BQB=0.956257;DP=2748;DP4=1373,1290,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.96094e-16;MQSB=0.984929;RPB=0.290581;SGB=116.569;VDB=0.720384;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.1:30411237 chr01:030411237 0 W/30411237-30411237 FN1419-S Single Base Substitution G-A INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN824-S.SNP.1:30413015 chr01:030413015 0 W/30413015-30413015 FN824-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN452-S.SNP.1:30418629 chr01:030418629 0 W/30418629-30418629 FN452-S Single Base Substitution T-A INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN3460-S.SNP.1:30420624 chr01:030420624 0 W/30420624-30420624 FN3460-S SNP A -> G AC=1;AN=184;BQB=0.164049;DP=2642;DP4=1248,1274,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.65218e-05;MQSB=0.853284;RPB=0.992297;SGB=-2.32838;VDB=0.976556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.1:30424695 chr01:030424695 0 W/30424695-30424695 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3626-S.SNP.1:30427043 chr01:030427043 0 W/30427043-30427043 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.970026;DP=2546;DP4=997,1465,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.83929e-06;MQSB=0.0470081;RPB=0.365559;SGB=49.0954;VDB=0.606741;EFF=UTR_5_PRIME(MODIFIER||444||488|LOC_Os01g52920|protein_coding|CODING|LOC_Os01g52920.1|1|1) FN3831-S.SNP.1:30431070 chr01:030431070 0 W/30431070-30431070 FN3831-S SNP C -> T AC=2;AN=190;BQB=0.926849;DP=2549;DP4=1245,1208,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.23375e-11;MQSB=0.95594;RPB=0.312648;SGB=90.0802;VDB=0.49346;EFF=UTR_3_PRIME(MODIFIER||40||488|LOC_Os01g52920|protein_coding|CODING|LOC_Os01g52920.1|7|1) FN-127.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN-127 Single Base Substitution G-A INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-241.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN-241 Single Base Substitution G-A INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-51.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN-51 Single Base Substitution G-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1152-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2226-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN2226-S SNP G -> A AC=2;AN=190;BQB=0.978124;DP=4808;DP4=2265,2147,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.84058e-20;MQSB=0.84107;RPB=0.925424;SGB=-0.482811;VDB=0.813167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN2340 SNP G -> A AC=2;AN=192;BQB=0.840633;DP=5090;DP4=2475,2183,32,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.28235e-25;MQSB=0.825496;RPB=0.504401;SGB=-51.4469;VDB=0.990139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN3846-S SNP G -> A AC=2;AN=190;BQB=0.777154;DP=2615;DP4=1329,1183,15,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.46119e-09;MQSB=0.723484;RPB=0.426026;SGB=90.0802;VDB=0.481799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.998426;DP=2620;DP4=1305,1189,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.0029e-12;MQSB=0.557469;RPB=0.650772;SGB=58.7637;VDB=0.114584;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN4117-S SNP G -> A AC=2;AN=182;BQB=0.946648;DP=2656;DP4=1343,1225,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.73986e-16;MQSB=0.688124;RPB=0.892951;SGB=116.285;VDB=0.0345701;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.1:30432103 chr01:030432103 0 W/30432103-30432103 FN824-S Single Base Substitution G-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3629-S.SNP.1:30435852 chr01:030435852 0 W/30435852-30435852 FN3629-S SNP G -> A AC=1;AN=190;BQB=0.917926;DP=2177;DP4=953,1169,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00367478;MQB=0.0180046;MQSB=0.244602;RPB=0.993177;SGB=26.3271;VDB=0.907611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E405K|894|LOC_Os01g52930|protein_coding|CODING|LOC_Os01g52930.1|3|1) FN3105-S.SNP.1:30436713 chr01:030436713 0 W/30436713-30436713 FN3105-S SNP C -> T AC=2;AN=184;BQB=0.888746;DP=3912;DP4=1946,1859,20,15;HOB=0.0215028;ICB=0.494625;MQ=31;MQ0F=0.214724;MQB=0.674097;MQSB=1.29408e-16;RPB=0.196218;SGB=152.744;VDB=0.140182;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L692|894|LOC_Os01g52930|protein_coding|CODING|LOC_Os01g52930.1|3|1) FN1423-S.SNP.1:30450708 chr01:030450708 0 W/30450708-30450708 FN1423-S Single Base Substitution T-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3360-S.SNP.1:30450965 chr01:030450965 0 W/30450965-30450965 FN3360-S SNP G -> T AC=1;AN=184;BQB=0.9163;DP=2743;DP4=1256,1308,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61873e-08;MQSB=0.995269;RPB=0.963592;SGB=46.3132;VDB=0.769856;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.1:30459127 chr01:030459127 0 W/30459127-30459127 FN483-S Single Base Substitution G-A INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2361.SNP.1:30460772 chr01:030460772 0 W/30460772-30460772 FN2361 SNP C -> T AC=2;AN=192;BQB=0.917219;DP=4360;DP4=2128,1988,25,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.76991e-22;MQSB=0.643386;RPB=0.82985;SGB=54.2852;VDB=0.149804;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R208|878|LOC_Os01g53000|protein_coding|CODING|LOC_Os01g53000.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R208|786|LOC_Os01g53000|protein_coding|CODING|LOC_Os01g53000.2|1|1) FN3495-S.SNP.1:30462613 chr01:030462613 0 W/30462613-30462613 FN3495-S SNP A -> G AC=1;AN=188;BQB=0.950922;DP=2803;DP4=1401,1319,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.18118e-07;MQSB=0.996371;RPB=0.16869;SGB=44.4357;VDB=0.574293;EFF=INTRON(MODIFIER||||878|LOC_Os01g53000|protein_coding|CODING|LOC_Os01g53000.1|1|1),INTRON(MODIFIER||||786|LOC_Os01g53000|protein_coding|CODING|LOC_Os01g53000.2|1|1) FN3565-S.SNP.1:30467641 chr01:030467641 0 W/30467641-30467641 FN3565-S SNP T -> C AC=2;AN=188;BQB=0.928832;DP=3448;DP4=1584,1736,15,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.10133e-23;MQSB=0.966164;RPB=0.838934;SGB=176.191;VDB=0.236468;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.1:30472649 chr01:030472649 0 W/30472649-30472649 FN893-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN456-S.SNP.1:30479227 chr01:030479227 0 W/30479227-30479227 FN456-S Single Base Substitution A-G INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-86.SNP.1:30479589 chr01:030479589 0 W/30479589-30479589 FN-86 Single Base Substitution T-A INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN818-S.SNP.1:30486174 chr01:030486174 0 W/30486174-30486174 FN818-S Single Base Substitution T-C INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. W42-1-3S-1.SNP.1:30498492 chr01:030498492 0 W/30498492-30498492 W42-1-3S-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3795-S.SNP.1:30510466 chr01:030510466 0 W/30510466-30510466 FN3795-S SNP C -> A AC=1;AN=190;BQB=0.283563;DP=2475;DP4=1353,1024,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64049e-06;MQSB=0.967583;RPB=0.915758;SGB=18.552;VDB=0.931286;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.1:30512613 chr01:030512613 0 W/30512613-30512613 FN4155-S SNP C -> A AC=1;AN=170;BQB=0.783283;DP=2613;DP4=1329,1181,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.0978e-07;MQSB=0.967987;RPB=0.968871;SGB=24.5502;VDB=0.91494;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V242L|264|LOC_Os01g53090|protein_coding|CODING|LOC_Os01g53090.1|3|1) FN4155-S.SNP.1:30512614 chr01:030512614 0 W/30512614-30512614 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.99516;DP=2599;DP4=1312,1179,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.47654e-07;MQSB=0.989776;RPB=0.985892;SGB=27.9928;VDB=0.9514;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I241|264|LOC_Os01g53090|protein_coding|CODING|LOC_Os01g53090.1|3|1) FN2083-S.SNP.1:30524437 chr01:030524437 0 W/30524437-30524437 FN2083-S SNP C -> G AC=2;AN=168;BQB=0.856578;DP=3387;DP4=1743,1575,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05282e-24;MQSB=0.899417;RPB=0.451151;SGB=90.2476;VDB=0.232278;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.1:30538071 chr01:030538071 0 W/30538071-30538071 FN4271-S SNP G -> A AC=2;AN=170;BQB=0.423257;DP=2818;DP4=1259,1435,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.72821e-10;MQSB=0.983042;RPB=0.455853;SGB=83.0751;VDB=0.46481;EFF=INTRON(MODIFIER||||316|LOC_Os01g53150|protein_coding|CODING|LOC_Os01g53150.1|2|1),INTRON(MODIFIER||||316|LOC_Os01g53150|protein_coding|CODING|LOC_Os01g53150.2|2|1) FN1375-S.SNP.1:30545214 chr01:030545214 0 W/30545214-30545214 FN1375-S Single Base Substitution T-C INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN-116.SNP.1:30556999 chr01:030556999 0 W/30556999-30556999 FN-116 Single Base Substitution C-T INTRON HOMO SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN2386.SNP.1:30559070 chr01:030559070 0 W/30559070-30559070 FN2386 SNP T -> C AC=1;AN=192;BQB=0.417879;DP=4802;DP4=2299,2156,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208247;MQB=2.16588e-14;MQSB=0.999973;RPB=0.247241;SGB=89.6809;VDB=0.95696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.1:30561183 chr01:030561183 0 W/30561183-30561183 FN1050-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN3423-S.SNP.1:30561837 chr01:030561837 0 W/30561837-30561837 FN3423-S SNP A -> G AC=1;AN=184;BQB=0.999797;DP=2873;DP4=1442,1228,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90554e-11;MQSB=0.999151;RPB=0.997471;SGB=-13.6704;VDB=0.824015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y121C|442|LOC_Os01g53200|protein_coding|CODING|LOC_Os01g53200.1|1|1) FN_N2-29a-1.SNP.1:30562626 chr01:030562626 0 W/30562626-30562626 FN_N2-29a-1 Single Base Substitution T-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN4188-S.SNP.1:30565048 chr01:030565048 0 W/30565048-30565048 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.949975;DP=2873;DP4=1207,1577,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.38952e-08;MQSB=0.980613;RPB=0.892935;SGB=47.8722;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.1:30567647 chr01:030567647 0 W/30567647-30567647 FN2356 SNP T -> G AC=2;AN=192;BQB=0.0184051;DP=2168;DP4=1410,534,5,5;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000461255;MQB=0.00327517;MQSB=0.741352;RPB=0.94758;SGB=40.0819;VDB=0.717543;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.1:30568007 chr01:030568007 0 W/30568007-30568007 FN2324 SNP G -> A AC=2;AN=192;BQB=0.0402339;DP=4383;DP4=2329,1762,28,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.60722e-26;MQSB=0.571778;RPB=0.955202;SGB=55.8496;VDB=0.418854;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.1:30573794 chr01:030573794 0 W/30573794-30573794 FN399-S Single Base Substitution C-T INTERGENIC HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2667-S.SNP.1:30580943 chr01:030580943 0 W/30580943-30580943 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.996496;DP=3539;DP4=1475,1828,10,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000847697;MQB=1.02174e-07;MQSB=0.00129863;RPB=0.921889;SGB=69.1109;VDB=0.112637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.1:30599884 chr01:030599884 0 W/30599884-30599884 FN2721-S SNP A -> C AC=2;AN=200;BQB=0.738842;DP=4799;DP4=2287,2246,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.69846e-22;MQSB=0.923999;RPB=0.773678;SGB=169.394;VDB=0.0896664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.1:30607821 chr01:030607821 0 W/30607821-30607821 FN1388-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2192-S.SNP.1:30609442 chr01:030609442 0 W/30609442-30609442 FN2192-S SNP A -> T AC=2;AN=190;BQB=0.972037;DP=4980;DP4=2355,2275,22,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26055e-23;MQSB=0.913249;RPB=0.631094;SGB=226.696;VDB=0.719774;EFF=INTRON(MODIFIER||||122|LOC_Os01g53280|protein_coding|CODING|LOC_Os01g53280.1|1|1),INTRON(MODIFIER||||122|LOC_Os01g53280|protein_coding|CODING|LOC_Os01g53280.2|1|1) FN914-S.SNP.1:30609462 chr01:030609462 0 W/30609462-30609462 FN914-S Single Base Substitution A-G INTRON HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN593-S.SNP.1:30617040 chr01:030617040 0 W/30617040-30617040 FN593-S Single Base Substitution T-A INTERGENIC HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN593-S.SNP.1:30617041 chr01:030617041 0 W/30617041-30617041 FN593-S Single Base Substitution T-A INTERGENIC HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-362.SNP.1:30627304 chr01:030627304 0 W/30627304-30627304 FN-362 Single Base Substitution A-G INTRON HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2648-S.SNP.1:30638613 chr01:030638613 0 W/30638613-30638613 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.942458;DP=4539;DP4=2153,2180,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00484688;MQB=2.51672e-07;MQSB=0.261799;RPB=0.612121;SGB=49.6594;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.1:30648371 chr01:030648371 0 W/30648371-30648371 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.796161;DP=1856;DP4=816,956,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.65517e-09;MQSB=0.952105;RPB=0.26285;SGB=-38.3665;VDB=0.171043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V248A|479|LOC_Os01g53330|protein_coding|CODING|LOC_Os01g53330.1|1|1) FN3438-S.SNP.1:30650954 chr01:030650954 0 W/30650954-30650954 FN3438-S SNP G -> T AC=1;AN=184;BQB=0.976835;DP=2808;DP4=1286,1427,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.69934e-15;MQSB=0.977188;RPB=0.987696;SGB=74.4875;VDB=0.471626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.1:30652650 chr01:030652650 0 W/30652650-30652650 FN3678-S SNP G -> T AC=1;AN=190;BQB=0.9065;DP=2697;DP4=1227,1342,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.75451e-06;MQSB=0.989163;RPB=0.862294;SGB=18.552;VDB=0.861364;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.1:30654149 chr01:030654149 0 W/30654149-30654149 FN1392-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3837-S.SNP.1:30654149 chr01:030654149 0 W/30654149-30654149 FN3837-S SNP G -> A AC=2;AN=190;BQB=0.511457;DP=2264;DP4=1205,964,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.0073e-10;MQSB=0.922224;RPB=0.84817;SGB=38.983;VDB=0.835959;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.1:30654149 chr01:030654149 0 W/30654149-30654149 FN4010-S SNP G -> A AC=1;AN=168;BQB=0.386165;DP=2095;DP4=1159,841,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00209381;MQSB=0.924619;RPB=0.995798;SGB=-4.39415;VDB=0.814818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.1:30654252 chr01:030654252 0 W/30654252-30654252 FN1746-S SNP T -> C AC=2;AN=188;BQB=0.444508;DP=4287;DP4=2043,2184,34,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65116e-22;MQSB=0.762173;RPB=0.861066;SGB=1.84238;VDB=0.685538;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.1:30656297 chr01:030656297 0 W/30656297-30656297 FN959-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g53350 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN959-S.SNP.1:30656298 chr01:030656298 0 W/30656298-30656298 FN959-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1263-S.SNP.1:30656359 chr01:030656359 0 W/30656359-30656359 FN1263-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g53350 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3656-S.SNP.1:30658442 chr01:030658442 0 W/30658442-30658442 FN3656-S SNP C -> T AC=1;AN=190;BQB=0.936776;DP=2520;DP4=1258,1138,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14458e-06;MQSB=0.96847;RPB=0.559028;SGB=35.4339;VDB=0.690812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.1:30658494 chr01:030658494 0 W/30658494-30658494 FN3418-S SNP A -> G AC=1;AN=184;BQB=0.515016;DP=3146;DP4=1593,1421,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05217e-07;MQSB=0.901256;RPB=0.50326;SGB=28.3187;VDB=0.883518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.1:30659629 chr01:030659629 0 W/30659629-30659629 FN1635-S SNP A -> G AC=1;AN=188;BQB=0.863968;DP=3006;DP4=1887,1089,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000160242;MQSB=0.981361;RPB=0.396094;SGB=-16.6296;VDB=0.339188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.1:30659865 chr01:030659865 0 W/30659865-30659865 FN-114 Single Base Substitution A-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2461.SNP.1:30665066 chr01:030665066 0 W/30665066-30665066 FN2461 SNP A -> T AC=1;AN=200;BQB=0.556899;DP=4772;DP4=2068,2418,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.41841e-09;MQSB=3.18477e-08;RPB=0.745601;SGB=86.5007;VDB=0.490072;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.1:30669104 chr01:030669104 0 W/30669104-30669104 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.862714;DP=2101;DP4=1021,963,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.92481e-09;MQSB=0.610407;RPB=0.854672;SGB=55.806;VDB=0.6178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.1:30672819 chr01:030672819 0 W/30672819-30672819 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.119268;DP=3783;DP4=1793,1937,15,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20115e-12;MQSB=0.757163;RPB=0.709723;SGB=-169.317;VDB=0.86005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.1:30673891 chr01:030673891 0 W/30673891-30673891 FN2085-S SNP C -> A AC=1;AN=168;BQB=0.80841;DP=4233;DP4=2374,1815,18,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.75347e-13;MQSB=0.944427;RPB=0.00546847;SGB=-83.76;VDB=0.353698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.1:30674377 chr01:030674377 0 W/30674377-30674377 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.966622;DP=5069;DP4=2522,2370,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72836e-14;MQSB=0.881351;RPB=0.128859;SGB=15.9106;VDB=0.210963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.1:30674806 chr01:030674806 0 W/30674806-30674806 FN2174-S SNP T -> A AC=1;AN=168;BQB=0.0133562;DP=2884;DP4=731,2109,3,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.473e-05;MQSB=0.931626;RPB=0.983024;SGB=-15.8033;VDB=0.398276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.1:30679520 chr01:030679520 0 W/30679520-30679520 FN1434-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2455.SNP.1:30683047 chr01:030683047 0 W/30683047-30683047 FN2455 SNP C -> A AC=1;AN=200;BQB=0.428799;DP=3638;DP4=1757,1703,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51914e-08;MQSB=0.324752;RPB=0.360648;SGB=3.06925;VDB=0.553256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.1:30684431 chr01:030684431 0 W/30684431-30684431 FN2768-S SNP T -> A AC=1;AN=198;BQB=0.661196;DP=4043;DP4=1808,1897,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000247341;MQB=8.05408e-13;MQSB=0.855982;RPB=0.991808;SGB=14.1348;VDB=0.609935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.1:30694789 chr01:030694789 0 W/30694789-30694789 FN2492 SNP G -> A AC=1;AN=200;BQB=0.958566;DP=4875;DP4=2073,2437,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.76764e-10;MQSB=0.983846;RPB=0.893935;SGB=24.2746;VDB=0.0989818;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.1:30699487 chr01:030699487 0 W/30699487-30699487 FN895-S Single Base Substitution G-A INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN895-S.SNP.1:30699488 chr01:030699488 0 W/30699488-30699488 FN895-S Single Base Substitution G-A INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN-234.SNP.1:30701995 chr01:030701995 0 W/30701995-30701995 FN-234 Single Base Substitution G-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. W706-3-1.SNP.1:30706488 chr01:030706488 0 W/30706488-30706488 W706-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN-207.SNP.1:30711493 chr01:030711493 0 W/30711493-30711493 FN-207 Single Base Substitution C-T INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2680-S.SNP.1:30711493 chr01:030711493 0 W/30711493-30711493 FN2680-S SNP C -> T AC=2;AN=200;BQB=0.143444;DP=4592;DP4=2039,1878,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00021777;MQB=2.54631e-31;MQSB=0.864815;RPB=0.992871;SGB=65.6709;VDB=0.228442;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:30711493 chr01:030711493 0 W/30711493-30711493 FN4114-S SNP C -> T AC=2;AN=182;BQB=0.886452;DP=1880;DP4=1106,566,11,2;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.90743e-08;MQSB=0.999824;RPB=0.137609;SGB=18.1224;VDB=0.694815;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.1:30711493 chr01:030711493 0 W/30711493-30711493 FN713-S Single Base Substitution C-T INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1681-S.SNP.1:30731820 chr01:030731820 0 W/30731820-30731820 FN1681-S SNP C -> T AC=2;AN=188;BQB=0.331252;DP=1917;DP4=1240,632,11,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.22011e-05;MQSB=0.355491;RPB=0.999694;SGB=43.0708;VDB=0.961424;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.1:30735281 chr01:030735281 0 W/30735281-30735281 W472-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2448.SNP.1:30743579 chr01:030743579 0 W/30743579-30743579 FN2448 SNP C -> T AC=1;AN=200;BQB=0.086073;DP=3875;DP4=1865,1741,4,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00103226;MQB=0.000509973;MQSB=0.00470434;RPB=0.99628;SGB=35.8441;VDB=0.113527;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.1:30743735 chr01:030743735 0 W/30743735-30743735 FN4137-S SNP G -> A AC=1;AN=170;BQB=0.796965;DP=2647;DP4=1365,1193,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00113336;MQB=3.56323e-05;MQSB=0.00995723;RPB=0.476184;SGB=74.528;VDB=0.185448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.1:30744599 chr01:030744599 0 W/30744599-30744599 FN2198-S SNP G -> A AC=1;AN=190;BQB=0.981764;DP=5154;DP4=2311,2492,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0302678;MQB=0.103193;MQSB=0.549502;RPB=0.903169;SGB=18.552;VDB=0.58245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.1:30751183 chr01:030751183 0 W/30751183-30751183 FN3512-S SNP G -> A AC=1;AN=188;BQB=0.913624;DP=3564;DP4=1739,1727,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0162738;MQB=0.22158;MQSB=0;RPB=0.87695;SGB=48.979;VDB=0.795782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.1:30753095 chr01:030753095 0 W/30753095-30753095 FN3513-S SNP T -> A AC=2;AN=188;BQB=0.999759;DP=3511;DP4=2099,1205,18,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.50354e-12;MQSB=0.933261;RPB=0.734625;SGB=46.4225;VDB=0.510154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.1:30756261 chr01:030756261 0 W/30756261-30756261 FN1202-S Single Base Substitution A-C INTRON HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3472-S.SNP.1:30768950 chr01:030768950 0 W/30768950-30768950 FN3472-S SNP A -> G AC=2;AN=184;BQB=0.993238;DP=3304;DP4=1452,1671,31,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02008e-26;MQSB=0.918362;RPB=0.878392;SGB=207.005;VDB=0.440626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E159G|208|LOC_Os01g53580|protein_coding|CODING|LOC_Os01g53580.1|1|1) FN-291.SNP.1:30770757 chr01:030770757 0 W/30770757-30770757 FN-291 Single Base Substitution G-C INTRON HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2105-S.SNP.1:30778627 chr01:030778627 0 W/30778627-30778627 FN2105-S SNP C -> T AC=1;AN=168;BQB=0.657745;DP=3208;DP4=1166,1993,7,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.98992e-12;MQSB=0.994323;RPB=0.999932;SGB=15.6372;VDB=0.797836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R98H|478|LOC_Os01g53600|protein_coding|CODING|LOC_Os01g53600.1|2|1),START_GAINED(LOW||||360|LOC_Os01g53600|protein_coding|CODING|LOC_Os01g53600.2|2|1),UTR_5_PRIME(MODIFIER||57||360|LOC_Os01g53600|protein_coding|CODING|LOC_Os01g53600.2|2|1) FN-310.SNP.1:30792050 chr01:030792050 0 W/30792050-30792050 FN-310 Single Base Substitution A-G INTRON HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-11.SNP.1:30799390 chr01:030799390 0 W/30799390-30799390 FN-11 Single Base Substitution T-A INTERGENIC Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3656-S.SNP.1:30802764 chr01:030802764 0 W/30802764-30802764 FN3656-S SNP G -> A AC=1;AN=190;BQB=0.549245;DP=3121;DP4=1446,1520,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00128164;MQB=1.51305e-05;MQSB=0.896339;RPB=0.758089;SGB=36.1006;VDB=0.984722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.1:30806257 chr01:030806257 0 W/30806257-30806257 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.451672;DP=4195;DP4=1827,2076,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.90543e-09;MQSB=0.979991;RPB=0.991909;SGB=50.9344;VDB=0.988217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.1:30806259 chr01:030806259 0 W/30806259-30806259 FN2536-S SNP A -> G AC=1;AN=198;BQB=0.961997;DP=4177;DP4=1863,2089,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.62353e-08;MQSB=0.914086;RPB=0.669021;SGB=58.7391;VDB=0.955712;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.1:30809162 chr01:030809162 0 W/30809162-30809162 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN4202-S.SNP.1:30813919 chr01:030813919 0 W/30813919-30813919 FN4202-S SNP G -> A AC=1;AN=170;BQB=0.962826;DP=2186;DP4=1159,922,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.39624e-07;MQSB=0.999338;RPB=0.855703;SGB=43.4296;VDB=0.203003;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:30821548 chr01:030821548 0 W/30821548-30821548 FN-170 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g53640 retrotransposon protein, putative, unclassified, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.1:30821549 chr01:030821549 0 W/30821549-30821549 FN-170 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1287-S.SNP.1:30822066 chr01:030822066 0 W/30822066-30822066 FN1287-S Single Base Substitution A-G INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2536-S.SNP.1:30831252 chr01:030831252 0 W/30831252-30831252 FN2536-S SNP A -> G AC=1;AN=198;BQB=0.582052;DP=4473;DP4=2324,1872,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000223564;MQB=7.83699e-09;MQSB=0.995173;RPB=0.853203;SGB=43.7442;VDB=0.710252;EFF=INTRON(MODIFIER||||586|LOC_Os01g53660|protein_coding|CODING|LOC_Os01g53660.1|3|1) FN1749-S.SNP.1:30834470 chr01:030834470 0 W/30834470-30834470 FN1749-S SNP A -> T AC=1;AN=188;BQB=0.00723848;DP=4017;DP4=1886,2085,22,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.95408e-15;MQSB=0.846027;RPB=0.527253;SGB=-128.204;VDB=0.55344;EFF=INTRON(MODIFIER||||636|LOC_Os01g53670|protein_coding|CODING|LOC_Os01g53670.1|7|1),INTRON(MODIFIER||||628|LOC_Os01g53670|protein_coding|CODING|LOC_Os01g53670.2|7|1),INTRON(MODIFIER||||530|LOC_Os01g53670|protein_coding|CODING|LOC_Os01g53670.3|6|1),INTRON(MODIFIER||||564|LOC_Os01g53670|protein_coding|CODING|LOC_Os01g53670.4|6|1) FN771-S.SNP.1:30835529 chr01:030835529 0 W/30835529-30835529 FN771-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g53670 ENTH domain containing protein, expressed SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2723-S.SNP.1:30841359 chr01:030841359 0 W/30841359-30841359 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.998749;DP=5072;DP4=2317,2486,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.60719e-15;MQSB=0.726874;RPB=0.856248;SGB=55.5366;VDB=0.971811;EFF=INTRON(MODIFIER||||560|LOC_Os01g53680|protein_coding|CODING|LOC_Os01g53680.1|11|1) FN2637-S.SNP.1:30842663 chr01:030842663 0 W/30842663-30842663 FN2637-S SNP C -> G AC=2;AN=200;BQB=0.995021;DP=5050;DP4=2217,2516,23,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.41006e-27;MQSB=0.982677;RPB=0.663017;SGB=65.6709;VDB=0.650484;EFF=INTRON(MODIFIER||||560|LOC_Os01g53680|protein_coding|CODING|LOC_Os01g53680.1|8|1) FN3508-S.SNP.1:30850149 chr01:030850149 0 W/30850149-30850149 FN3508-S SNP T -> C AC=1;AN=188;BQB=0.974915;DP=3139;DP4=1252,1685,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.41854e-06;MQSB=0.593509;RPB=0.695087;SGB=32.441;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.1:30851909 chr01:030851909 0 W/30851909-30851909 FN2731-S SNP G -> T AC=1;AN=200;BQB=0.951765;DP=5149;DP4=2482,2396,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.86773e-13;MQSB=0.997306;RPB=0.953762;SGB=22.3313;VDB=0.319409;EFF=INTRON(MODIFIER||||499|LOC_Os01g53700|protein_coding|CODING|LOC_Os01g53700.1|11|1) FN2234-S.SNP.1:30863209 chr01:030863209 0 W/30863209-30863209 FN2234-S SNP G -> A AC=1;AN=190;BQB=0.852902;DP=3828;DP4=1620,1778,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.28282e-06;MQSB=0.0924388;RPB=0.33051;SGB=21.1058;VDB=0.306911;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.1:30866945 chr01:030866945 0 W/30866945-30866945 FN-161 Single Base Substitution G-A INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3782-S.SNP.1:30873965 chr01:030873965 0 W/30873965-30873965 FN3782-S SNP G -> A AC=1;AN=190;BQB=0.982954;DP=2509;DP4=1115,1308,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.06615e-07;MQSB=0.862745;RPB=0.950968;SGB=53.6492;VDB=0.410895;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.1:30874501 chr01:030874501 0 W/30874501-30874501 FN_N1-213-1 Single Base Substitution G-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2684-S.SNP.1:30875849 chr01:030875849 0 W/30875849-30875849 FN2684-S SNP A -> C AC=1;AN=200;BQB=0.937969;DP=5227;DP4=2204,2855,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29225e-14;MQSB=0.998802;RPB=0.770911;SGB=95.7111;VDB=0.284248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.1:30877811 chr01:030877811 0 W/30877811-30877811 FN1463-S Single Base Substitution A-G INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN772-S.SNP.1:30879902 chr01:030879902 0 W/30879902-30879902 FN772-S Single Base Substitution T-C INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN771-S.SNP.1:30890125 chr01:030890125 0 W/30890125-30890125 FN771-S Single Base Substitution G-T INTRON HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2312.SNP.1:30892649 chr01:030892649 0 W/30892649-30892649 FN2312 SNP T -> G AC=1;AN=192;BQB=0.451284;DP=5212;DP4=2141,2771,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.82251e-16;MQSB=0.806885;RPB=0.99134;SGB=122.24;VDB=0.546321;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.1:30900113 chr01:030900113 0 W/30900113-30900113 FN2254-S SNP T -> C AC=1;AN=190;BQB=0.808974;DP=4891;DP4=2365,2308,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97668e-09;MQSB=0.787351;RPB=0.786676;SGB=36.4291;VDB=0.264846;EFF=INTRON(MODIFIER||||474|LOC_Os01g53750|protein_coding|CODING|LOC_Os01g53750.1|2|1) FN4249-S.SNP.1:30903441 chr01:030903441 0 W/30903441-30903441 FN4249-S SNP T -> G AC=1;AN=170;BQB=0.508133;DP=2676;DP4=1323,1237,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.5863e-10;MQSB=0.962257;RPB=0.0667339;SGB=-13.4484;VDB=0.167077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.1:30921626 chr01:030921626 0 W/30921626-30921626 FN2450 SNP G -> T AC=1;AN=200;BQB=0.85656;DP=5298;DP4=2375,2434,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.96039e-07;MQSB=0.712806;RPB=0.309606;SGB=40.2696;VDB=0.541492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.1:30921868 chr01:030921868 0 W/30921868-30921868 FN2233-S SNP T -> G AC=1;AN=190;BQB=0.977723;DP=4586;DP4=2027,2179,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21151e-09;MQSB=0.982351;RPB=0.934696;SGB=46.7622;VDB=0.0534108;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.1:30927685 chr01:030927685 0 W/30927685-30927685 FN682-S Single Base Substitution A-G INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN-253.SNP.1:30927986 chr01:030927986 0 W/30927986-30927986 FN-253 Single Base Substitution G-A INTERGENIC HET SNo: 252, Mutant_ID: FN-253, Generation: M2, Mutations: 5, Genes: 107, Seed availability: Yes. FN3710-S.SNP.1:30933008 chr01:030933008 0 W/30933008-30933008 FN3710-S SNP T -> G AC=1;AN=190;BQB=0.979074;DP=2930;DP4=1431,1249,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.41545e-07;MQSB=0.900502;RPB=0.97228;SGB=15.9981;VDB=0.919643;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.1:30934670 chr01:030934670 0 W/30934670-30934670 FN924-S Single Base Substitution G-T STOP_GAINED HET LOC_Os01g53810 peptidase, putative, expressed SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN924-S.SNP.1:30934671 chr01:030934671 0 W/30934671-30934671 FN924-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g53810 peptidase, putative, expressed SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3496-S.SNP.1:30939383 chr01:030939383 0 W/30939383-30939383 FN3496-S SNP A -> G AC=1;AN=188;BQB=0.999999;DP=3158;DP4=1684,1347,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17823e-12;MQSB=0.908194;RPB=0.893438;SGB=85.3253;VDB=0.529143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.1:30944337 chr01:030944337 0 W/30944337-30944337 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.970105;DP=3314;DP4=1678,1518,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.57677e-05;MQSB=0.94057;RPB=0.95243;SGB=35.1773;VDB=0.76064;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.1:30947436 chr01:030947436 0 W/30947436-30947436 FN4311-S SNP G -> A AC=2;AN=170;BQB=0.992806;DP=1889;DP4=761,1027,6,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.42212e-13;MQSB=0.989323;RPB=0.802431;SGB=83.4133;VDB=0.84699;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S56|340|LOC_Os01g53830|protein_coding|CODING|LOC_Os01g53830.1|1|1) FN4311-S.SNP.1:30947437 chr01:030947437 0 W/30947437-30947437 FN4311-S SNP G -> A AC=2;AN=170;BQB=0.999315;DP=1878;DP4=752,1020,5,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.61202e-12;MQSB=0.998138;RPB=0.900791;SGB=78.9707;VDB=0.748755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S56F|340|LOC_Os01g53830|protein_coding|CODING|LOC_Os01g53830.1|1|1) FN1590-S.SNP.1:30948005 chr01:030948005 0 W/30948005-30948005 FN1590-S Single Base Substitution C-A INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3477-S.SNP.1:30956652 chr01:030956652 0 W/30956652-30956652 FN3477-S SNP G -> A AC=1;AN=184;BQB=0.715609;DP=3785;DP4=1414,2265,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.63654e-08;MQSB=0.790985;RPB=0.694581;SGB=48.7425;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.1:30956952 chr01:030956952 0 W/30956952-30956952 FN2119-S SNP A -> C AC=2;AN=166;BQB=0.1525;DP=2774;DP4=1303,1425,13,20;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=4.73031e-11;MQSB=0.954308;RPB=0.832697;SGB=-8.91027;VDB=0.886913;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.1:30958567 chr01:030958567 0 W/30958567-30958567 FN734-S Single Base Substitution A-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN4181-S.SNP.1:30959533 chr01:030959533 0 W/30959533-30959533 FN4181-S SNP T -> A AC=1;AN=170;BQB=0.624678;DP=2963;DP4=1291,1581,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.54039e-07;MQSB=0.903008;RPB=0.922605;SGB=43.4296;VDB=0.989047;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.1:30960322 chr01:030960322 0 W/30960322-30960322 FN4081-S SNP A -> T AC=1;AN=182;BQB=0.431758;DP=3233;DP4=1425,1691,5,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.81627e-08;MQSB=0.982068;RPB=0.980742;SGB=5.1496;VDB=0.299629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.1:30970721 chr01:030970721 0 W/30970721-30970721 FN2482 SNP T -> A AC=1;AN=200;BQB=0.990825;DP=4828;DP4=2197,2353,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2181e-13;MQSB=0.851467;RPB=0.232294;SGB=72.7161;VDB=0.773249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.1:30982612 chr01:030982612 0 W/30982612-30982612 FN2125-S SNP G -> A AC=1;AN=166;BQB=0.170654;DP=3460;DP4=1491,1914,10,17;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=1.2772e-09;MQSB=0.999088;RPB=0.159269;SGB=-105.77;VDB=0.0771439;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:30985422 chr01:030985422 0 W/30985422-30985422 FN788-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g53890 RNA methyltransferase, TrmH family protein, putative, expressed SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN-82.SNP.1:30990022 chr01:030990022 0 W/30990022-30990022 FN-82 Single Base Substitution A-T INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN760-S.SNP.1:30997343 chr01:030997343 0 W/30997343-30997343 FN760-S Single Base Substitution G-C INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN-122.SNP.1:31000276 chr01:031000276 0 W/31000276-31000276 FN-122 Single Base Substitution C-G INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-122.SNP.1:31000839 chr01:031000839 0 W/31000839-31000839 FN-122 Single Base Substitution G-C INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN569-S.SNP.1:31003493 chr01:031003493 0 W/31003493-31003493 FN569-S Single Base Substitution T-G INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN-9.SNP.1:31007570 chr01:031007570 0 W/31007570-31007570 FN-9 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os01g53920 receptor-like protein kinase 5 precursor, putative, expressed SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN3560-S.SNP.1:31009620 chr01:031009620 0 W/31009620-31009620 FN3560-S SNP G -> A AC=2;AN=188;BQB=0.999102;DP=3158;DP4=1591,1445,23,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.37963e-23;MQSB=0.776219;RPB=0.054539;SGB=131.653;VDB=0.0247371;EFF=UTR_3_PRIME(MODIFIER||455||506|LOC_Os01g53930|protein_coding|CODING|LOC_Os01g53930.1|9|1),UTR_3_PRIME(MODIFIER||1313||346|LOC_Os01g53930|protein_coding|CODING|LOC_Os01g53930.2|8|1),UTR_3_PRIME(MODIFIER||192||1066|LOC_Os01g53920|protein_coding|CODING|LOC_Os01g53920.1|2|1) FN1475-S.SNP.1:31016139 chr01:031016139 0 W/31016139-31016139 FN1475-S Single Base Substitution A-T INTRON Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. W453-3-1.SNP.1:31019070 chr01:031019070 0 W/31019070-31019070 W453-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN4208-S.SNP.1:31027213 chr01:031027213 0 W/31027213-31027213 FN4208-S SNP A -> G AC=1;AN=170;BQB=0.853009;DP=2473;DP4=894,1509,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=17;MQ0F=0.293571;MQB=0.733445;MQSB=3.85077e-07;RPB=0.896431;SGB=61.2001;VDB=0.975608;EFF=INTRON(MODIFIER||||1567|LOC_Os01g53960|protein_coding|CODING|LOC_Os01g53960.1|2|1) FN4167-S.SNP.1:31027782 chr01:031027782 0 W/31027782-31027782 FN4167-S SNP C -> A AC=1;AN=170;BQB=0.272362;DP=2547;DP4=1291,1078,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=32;MQ0F=0.0592854;MQB=0.509438;MQSB=0;RPB=0.593831;SGB=38.987;VDB=0.405936;EFF=INTRON(MODIFIER||||1567|LOC_Os01g53960|protein_coding|CODING|LOC_Os01g53960.1|2|1) FN901-S.SNP.1:31032108 chr01:031032108 0 W/31032108-31032108 FN901-S Single Base Substitution C-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1475-S.SNP.1:31033721 chr01:031033721 0 W/31033721-31033721 FN1475-S Single Base Substitution T-G INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1346-S.SNP.1:31035174 chr01:031035174 0 W/31035174-31035174 FN1346-S Single Base Substitution A-T INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2476.SNP.1:31038427 chr01:031038427 0 W/31038427-31038427 FN2476 SNP C -> T AC=1;AN=200;BQB=0.26977;DP=5175;DP4=2284,2546,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39084e-14;MQSB=0.995899;RPB=0.68833;SGB=79.9264;VDB=0.166522;EFF=INTERGENIC(MODIFIER||||||||||1) 704-1-1.SNP.1:31040549 chr01:031040549 0 W/31040549-31040549 704-1-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN-183.SNP.1:31045966 chr01:031045966 0 W/31045966-31045966 FN-183 Single Base Substitution C-T INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN-379.SNP.1:31046221 chr01:031046221 0 W/31046221-31046221 FN-379 Single Base Substitution G-A INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1217-S.SNP.1:31053666 chr01:031053666 0 W/31053666-31053666 FN1217-S Single Base Substitution G-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN-216.SNP.1:31054185 chr01:031054185 0 W/31054185-31054185 FN-216 Single Base Substitution C-G INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2357.SNP.1:31055473 chr01:031055473 0 W/31055473-31055473 FN2357 SNP T -> A AC=1;AN=192;BQB=0.479583;DP=4382;DP4=1919,2077,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.41494e-21;MQSB=0.925108;RPB=0.312438;SGB=35.5131;VDB=0.385811;EFF=INTERGENIC(MODIFIER||||||||||1) FN-382.SNP.1:31058910 chr01:031058910 0 W/31058910-31058910 FN-382 Single Base Substitution G-A INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN-23.SNP.1:31059517 chr01:031059517 0 W/31059517-31059517 FN-23 Single Base Substitution C-A INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN1247-S.SNP.1:31062037 chr01:031062037 0 W/31062037-31062037 FN1247-S Single Base Substitution T-C INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN2625-S.SNP.1:31064364 chr01:031064364 0 W/31064364-31064364 FN2625-S SNP A -> G AC=1;AN=200;BQB=0.242634;DP=4517;DP4=2026,1729,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04183e-14;MQSB=0.485569;RPB=0.826157;SGB=-7.05853;VDB=0.349174;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.1:31065292 chr01:031065292 0 W/31065292-31065292 FN2682-S SNP A -> G AC=1;AN=200;BQB=0.0598841;DP=4651;DP4=2053,1754,3,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.2386e-07;MQSB=0.596889;RPB=0.412203;SGB=-126.111;VDB=0.615427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I18M|728|LOC_Os01g54010|protein_coding|CODING|LOC_Os01g54010.1|1|1) FN950-S.SNP.1:31079865 chr01:031079865 0 W/31079865-31079865 FN950-S Single Base Substitution T-A INTRON HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-409.SNP.1:31098056 chr01:031098056 0 W/31098056-31098056 FN-409 Single Base Substitution T-C INTERGENIC HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1153-S.SNP.1:31099171 chr01:031099171 0 W/31099171-31099171 FN1153-S Single Base Substitution C-T INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1615-S.SNP.1:31113625 chr01:031113625 0 W/31113625-31113625 FN1615-S Single Base Substitution C-T INTRON HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN678-S.SNP.1:31114562 chr01:031114562 0 W/31114562-31114562 FN678-S Single Base Substitution T-A INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3710-S.SNP.1:31115885 chr01:031115885 0 W/31115885-31115885 FN3710-S SNP A -> T AC=2;AN=190;BQB=0.217682;DP=2243;DP4=1049,1007,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.48091e-06;MQSB=0.809326;RPB=0.966921;SGB=-14.3297;VDB=0.977103;EFF=UTR_5_PRIME(MODIFIER||1410||482|LOC_Os01g54100|protein_coding|CODING|LOC_Os01g54100.2|1|1) FN3901-S.SNP.1:31122628 chr01:031122628 0 W/31122628-31122628 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.999716;DP=2161;DP4=1109,916,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000525104;MQSB=0.625997;RPB=0.99973;SGB=29.5899;VDB=0.433664;EFF=INTRON(MODIFIER||||709|LOC_Os01g54119|protein_coding|CODING|LOC_Os01g54119.1|14|1) FN4305-S.SNP.1:31122849 chr01:031122849 0 W/31122849-31122849 FN4305-S SNP C -> T AC=1;AN=170;BQB=0.859393;DP=2443;DP4=1216,1166,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000409333;MQB=9.18084e-05;MQSB=0.186689;RPB=0.999951;SGB=61.2001;VDB=0.27442;EFF=INTRON(MODIFIER||||709|LOC_Os01g54119|protein_coding|CODING|LOC_Os01g54119.1|14|1) FN3581-S.SNP.1:31145139 chr01:031145139 0 W/31145139-31145139 FN3581-S SNP T -> C AC=1;AN=190;BQB=0.494974;DP=2757;DP4=1511,1155,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.141095;MQB=0.743812;MQSB=1.67284e-16;RPB=0.199484;SGB=53.6492;VDB=0.0970192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I1747V|1781|LOC_Os01g54160|protein_coding|CODING|LOC_Os01g54160.1|5|1) FN2243-S.SNP.1:31160941 chr01:031160941 0 W/31160941-31160941 FN2243-S SNP C -> T AC=2;AN=190;BQB=0.226844;DP=3383;DP4=1653,1430,19,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000295596;MQB=2.5193e-13;MQSB=0.0130982;RPB=0.9717;SGB=92.9626;VDB=0.0763575;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.1:31164188 chr01:031164188 0 W/31164188-31164188 FN-201 Single Base Substitution A-T INTRON HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN-411.SNP.1:31172182 chr01:031172182 0 W/31172182-31172182 FN-411 Single Base Substitution C-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN3766-S.SNP.1:31181564 chr01:031181564 0 W/31181564-31181564 FN3766-S SNP T -> A AC=1;AN=190;BQB=0.980093;DP=3336;DP4=1539,1666,4,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.05378e-12;MQSB=0.991129;RPB=0.0638102;SGB=76.4186;VDB=0.0963178;EFF=INTRON(MODIFIER||||387|LOC_Os01g54210|protein_coding|CODING|LOC_Os01g54210.1|1|1) FN3766-S.SNP.1:31181567 chr01:031181567 0 W/31181567-31181567 FN3766-S SNP T -> A AC=1;AN=190;BQB=0.863259;DP=3325;DP4=1549,1594,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.27123e-11;MQSB=0.98837;RPB=0.122506;SGB=57.4238;VDB=0.0839633;EFF=INTRON(MODIFIER||||387|LOC_Os01g54210|protein_coding|CODING|LOC_Os01g54210.1|1|1) FN431-S.SNP.1:31188880 chr01:031188880 0 W/31188880-31188880 FN431-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g54220 transposon protein, putative, unclassified, expressed SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN1421-S.SNP.1:31198289 chr01:031198289 0 W/31198289-31198289 FN1421-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g54230 expressed protein SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2430.SNP.1:31200443 chr01:031200443 0 W/31200443-31200443 FN2430 SNP A -> T AC=1;AN=200;BQB=0.798528;DP=4459;DP4=1940,2193,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.56049e-08;MQSB=0.567797;RPB=0.987003;SGB=36.6644;VDB=0.997845;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.1:31202508 chr01:031202508 0 W/31202508-31202508 FN-187 Single Base Substitution A-C INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1241-S.SNP.1:31219482 chr01:031219482 0 W/31219482-31219482 FN1241-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN4030-S.SNP.1:31229392 chr01:031229392 0 W/31229392-31229392 FN4030-S SNP G -> A AC=1;AN=168;BQB=0.999786;DP=3702;DP4=1280,2264,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62973e-09;MQSB=0.999718;RPB=0.695483;SGB=27.0464;VDB=0.203946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.1:31230063 chr01:031230063 0 W/31230063-31230063 FN1381-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN430-S.SNP.1:31235620 chr01:031235620 0 W/31235620-31235620 FN430-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g54290 retrotransposon protein, putative, unclassified, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3897-S.SNP.1:31237437 chr01:031237437 0 W/31237437-31237437 FN3897-S SNP T -> A AC=1;AN=158;BQB=0.882968;DP=2582;DP4=1085,1343,7,15;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00154919;MQB=1.97284e-05;MQSB=5.07932e-06;RPB=0.896948;SGB=64.3985;VDB=0.159471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W975R|1294|LOC_Os01g54290|protein_coding|CODING|LOC_Os01g54290.1|1|1) FN698-S.SNP.1:31239023 chr01:031239023 0 W/31239023-31239023 FN698-S Single Base Substitution C-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN-9.SNP.1:31239370 chr01:031239370 0 W/31239370-31239370 FN-9 Single Base Substitution T-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN2740-S.SNP.1:31239916 chr01:031239916 0 W/31239916-31239916 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.529202;DP=5004;DP4=2130,2569,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55471e-12;MQSB=0.55852;RPB=0.604909;SGB=-37.6845;VDB=0.970215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.1:31248985 chr01:031248985 0 W/31248985-31248985 FN1026-S Single Base Substitution C-A INTRON HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2639-S.SNP.1:31258163 chr01:031258163 0 W/31258163-31258163 FN2639-S SNP G -> T AC=1;AN=200;BQB=0.942154;DP=5069;DP4=2638,2135,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25628e-16;MQSB=0.984515;RPB=0.789427;SGB=60.747;VDB=0.912372;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.1:31259890 chr01:031259890 0 W/31259890-31259890 FN479-S Single Base Substitution C-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN4183-S.SNP.1:31260228 chr01:031260228 0 W/31260228-31260228 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.976773;DP=2674;DP4=1421,1174,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07275e-06;MQSB=0.928641;RPB=0.55744;SGB=31.4354;VDB=0.82583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.1:31264136 chr01:031264136 0 W/31264136-31264136 FN2454 SNP C -> A AC=1;AN=200;BQB=0.69764;DP=4671;DP4=2111,2121,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000214087;MQB=1.51458e-09;MQSB=0.559224;RPB=0.747561;SGB=-13.7154;VDB=0.64661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.1:31264148 chr01:031264148 0 W/31264148-31264148 FN2593-S SNP A -> T AC=1;AN=198;BQB=0.5334;DP=4083;DP4=1999,1850,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.92305e-16;MQSB=0.930662;RPB=0.717482;SGB=90.4807;VDB=0.933192;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.1:31264418 chr01:031264418 0 W/31264418-31264418 FN354-S Single Base Substitution A-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN2114-S.SNP.1:31276411 chr01:031276411 0 W/31276411-31276411 FN2114-S SNP C -> A AC=1;AN=168;BQB=0.936881;DP=3987;DP4=1984,1960,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.08832e-12;MQSB=0.995312;RPB=0.553742;SGB=-41.2125;VDB=0.148096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W520L|637|LOC_Os01g54350|protein_coding|CODING|LOC_Os01g54350.1|3|1) FN3966-S.SNP.1:31292237 chr01:031292237 0 W/31292237-31292237 FN3966-S SNP G -> A AC=1;AN=168;BQB=0.932736;DP=2445;DP4=1151,1194,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000408998;MQB=5.76328e-06;MQSB=0.94458;RPB=0.246136;SGB=43.3113;VDB=0.258967;EFF=INTRON(MODIFIER||||305|LOC_Os01g54390|protein_coding|CODING|LOC_Os01g54390.1|10|1),INTRON(MODIFIER||||305|LOC_Os01g54390|protein_coding|CODING|LOC_Os01g54390.2|10|1) FN1565-S.SNP.1:31300977 chr01:031300977 0 W/31300977-31300977 FN1565-S Single Base Substitution T-C INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2112-S.SNP.1:31302609 chr01:031302609 0 W/31302609-31302609 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.999016;DP=2609;DP4=1460,1079,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.45657e-08;MQSB=0.940648;RPB=0.520513;SGB=4.1907;VDB=0.537893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.1:31308817 chr01:031308817 0 W/31308817-31308817 FN3950-S SNP C -> A AC=1;AN=168;BQB=0.953868;DP=2376;DP4=998,1295,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.27556e-07;MQSB=0.999753;RPB=0.882308;SGB=43.3113;VDB=0.348281;EFF=INTRON(MODIFIER||||822|LOC_Os01g54420|protein_coding|CODING|LOC_Os01g54420.1|7|1) FN1251-S.SNP.1:31311517 chr01:031311517 0 W/31311517-31311517 FN1251-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g54420 dynamin family protein, putative, expressed SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3799-S.SNP.1:31311517 chr01:031311517 0 W/31311517-31311517 FN3799-S SNP C -> A AC=1;AN=190;BQB=0.970316;DP=2786;DP4=1302,1383,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33083e-07;MQSB=0.857695;RPB=0.940556;SGB=44.5415;VDB=0.32632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D308Y|822|LOC_Os01g54420|protein_coding|CODING|LOC_Os01g54420.1|4|1) W450-6-1.SNP.1:31311517 chr01:031311517 0 W/31311517-31311517 W450-6-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g54420 dynamin family protein, putative, expressed SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-195.SNP.1:31316869 chr01:031316869 0 W/31316869-31316869 FN-195 Single Base Substitution G-A INTRON HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN806-S.SNP.1:31319738 chr01:031319738 0 W/31319738-31319738 FN806-S Single Base Substitution C-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1039-S.SNP.1:31322469 chr01:031322469 0 W/31322469-31322469 FN1039-S Single Base Substitution C-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN-159.SNP.1:31326927 chr01:031326927 0 W/31326927-31326927 FN-159 Single Base Substitution T-A INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN964-S.SNP.1:31329447 chr01:031329447 0 W/31329447-31329447 FN964-S Single Base Substitution T-C INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4050-S.SNP.1:31330734 chr01:031330734 0 W/31330734-31330734 FN4050-S SNP G -> T AC=1;AN=168;BQB=0.753625;DP=2631;DP4=1215,1266,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.81311e-10;MQSB=0.79704;RPB=0.997548;SGB=62.1945;VDB=0.472602;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.1:31333280 chr01:031333280 0 W/31333280-31333280 FN-208 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-246.SNP.1:31337583 chr01:031337583 0 W/31337583-31337583 FN-246 Single Base Substitution G-A INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-246.SNP.1:31337584 chr01:031337584 0 W/31337584-31337584 FN-246 Single Base Substitution T-A INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN1099-S.SNP.1:31353277 chr01:031353277 0 W/31353277-31353277 FN1099-S Single Base Substitution T-C INTERGENIC HOMO SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1422-S.SNP.1:31360478 chr01:031360478 0 W/31360478-31360478 FN1422-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3630-S.SNP.1:31360923 chr01:031360923 0 W/31360923-31360923 FN3630-S SNP A -> C AC=1;AN=190;BQB=0.76928;DP=2319;DP4=1026,1214,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000127681;MQSB=0.318063;RPB=0.497776;SGB=28.9929;VDB=0.825615;EFF=INTRON(MODIFIER||||252|LOC_Os01g54520|protein_coding|CODING|LOC_Os01g54520.1|2|1) FN2200-S.SNP.1:31370361 chr01:031370361 0 W/31370361-31370361 FN2200-S SNP A -> T AC=1;AN=190;BQB=0.80373;DP=3726;DP4=1369,1727,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.95565e-08;MQSB=0.00036027;RPB=0.0382568;SGB=-88.76;VDB=0.059164;EFF=START_GAINED(LOW||||440|LOC_Os01g54550|protein_coding|CODING|LOC_Os01g54550.1|1|1),UTR_5_PRIME(MODIFIER||232||440|LOC_Os01g54550|protein_coding|CODING|LOC_Os01g54550.1|1|1) FN4113-S.SNP.1:31371184 chr01:031371184 0 W/31371184-31371184 FN4113-S SNP G -> A AC=1;AN=182;BQB=0.998185;DP=2964;DP4=1503,1375,13,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.19159e-16;MQSB=0.976625;RPB=0.96926;SGB=116.285;VDB=0.520107;EFF=INTRON(MODIFIER||||440|LOC_Os01g54550|protein_coding|CODING|LOC_Os01g54550.1|1|1) W276-2-1.SNP.1:31377148 chr01:031377148 0 W/31377148-31377148 W276-2-1 Single Base Substitution T-A INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2080-S.SNP.1:31378079 chr01:031378079 0 W/31378079-31378079 FN2080-S SNP T -> G AC=1;AN=168;BQB=0.122835;DP=2978;DP4=1727,1214,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.3766e-05;MQSB=0.599744;RPB=0.975658;SGB=-37.2282;VDB=0.209099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.1:31383700 chr01:031383700 0 W/31383700-31383700 FN3496-S SNP A -> C AC=1;AN=188;BQB=0.749256;DP=3499;DP4=2020,1167,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31447e-11;MQSB=0.423904;RPB=0.954125;SGB=48.9658;VDB=0.948218;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.1:31384851 chr01:031384851 0 W/31384851-31384851 FN990-S Single Base Substitution C-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN548-S.SNP.1:31390654 chr01:031390654 0 W/31390654-31390654 FN548-S Single Base Substitution T-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN1156-S.SNP.1:31391863 chr01:031391863 0 W/31391863-31391863 FN1156-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1156-S.SNP.1:31391864 chr01:031391864 0 W/31391864-31391864 FN1156-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g54570 DUF623 domain containing protein, expressed SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3944-S.SNP.1:31392570 chr01:031392570 0 W/31392570-31392570 FN3944-S SNP C -> T AC=2;AN=168;BQB=0.991993;DP=2618;DP4=1339,1145,16,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.55728e-14;MQSB=0.764626;RPB=0.974756;SGB=105.343;VDB=0.0247038;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.1:31394305 chr01:031394305 0 W/31394305-31394305 FN899-S Single Base Substitution C-T INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN563-S.SNP.1:31394315 chr01:031394315 0 W/31394315-31394315 FN563-S Single Base Substitution C-T INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN499-S.SNP.1:31405588 chr01:031405588 0 W/31405588-31405588 FN499-S Single Base Substitution A-T INTRON HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-113.SNP.1:31414880 chr01:031414880 0 W/31414880-31414880 FN-113 Single Base Substitution T-A INTERGENIC HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN4187-S.SNP.1:31416720 chr01:031416720 0 W/31416720-31416720 FN4187-S SNP G -> T AC=2;AN=170;BQB=0.888413;DP=2523;DP4=1123,1293,13,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.37748e-16;MQSB=0.906399;RPB=0.823458;SGB=118.955;VDB=0.579738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.1:31420043 chr01:031420043 0 W/31420043-31420043 FN1526-S Single Base Substitution A-T INTRON HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN3831-S.SNP.1:31429737 chr01:031429737 0 W/31429737-31429737 FN3831-S SNP G -> T AC=2;AN=190;BQB=0.710136;DP=2359;DP4=1154,1096,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.69655e-14;MQSB=0.955355;RPB=0.0657961;SGB=121.957;VDB=0.672607;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.1:31436429 chr01:031436429 0 W/31436429-31436429 FN4010-S SNP T -> C AC=1;AN=168;BQB=0.959653;DP=2923;DP4=1219,1595,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00855286;MQB=4.9761e-07;MQSB=0.00473905;RPB=0.782975;SGB=41.6096;VDB=0.606379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.1:31444199 chr01:031444199 0 W/31444199-31444199 FN3421-S SNP A -> G AC=1;AN=184;BQB=0.993196;DP=3859;DP4=2278,1381,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0603783;MQB=0.599641;MQSB=0.816229;RPB=0.744609;SGB=30.8405;VDB=0.532804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.1:31447563 chr01:031447563 0 W/31447563-31447563 FN3536-S SNP C -> T AC=1;AN=188;BQB=0.989339;DP=3929;DP4=2203,1657,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.11886;MQB=0.798938;MQSB=0;RPB=0.699839;SGB=46.6141;VDB=0.389411;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q924|1943|LOC_Os01g54660|protein_coding|CODING|LOC_Os01g54660.1|2|1) FN2260-S.SNP.1:31449024 chr01:031449024 0 W/31449024-31449024 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.00456798;DP=4040;DP4=1850,1875,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.128713;MQB=0.952679;MQSB=1.29675e-05;RPB=0.527166;SGB=1.00337;VDB=0.135519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R450Q|1943|LOC_Os01g54660|protein_coding|CODING|LOC_Os01g54660.1|1|1) FN3767-S.SNP.1:31450904 chr01:031450904 0 W/31450904-31450904 FN3767-S SNP G -> A AC=1;AN=190;BQB=0.989434;DP=2372;DP4=840,1428,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00590219;MQB=0.790787;MQSB=0.107447;RPB=0.99707;SGB=39.9877;VDB=0.891275;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.1:31453662 chr01:031453662 0 W/31453662-31453662 FN-298 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN835-S.SNP.1:31457913 chr01:031457913 0 W/31457913-31457913 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN3453-S.SNP.1:31466285 chr01:031466285 0 W/31466285-31466285 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.996756;DP=4047;DP4=2082,1873,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0071658;MQB=0.000682682;MQSB=0.018012;RPB=0.990222;SGB=39.2697;VDB=0.71883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.1:31467218 chr01:031467218 0 W/31467218-31467218 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.490019;DP=4298;DP4=2013,2207,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0474639;MQB=3.69852e-06;MQSB=9.9099e-16;RPB=0.997538;SGB=20.9711;VDB=0.666544;EFF=INTRON(MODIFIER||||1338|LOC_Os01g54690|protein_coding|CODING|LOC_Os01g54690.1|4|1) FN2260-S.SNP.1:31467431 chr01:031467431 0 W/31467431-31467431 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.214519;DP=4770;DP4=2722,1810,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0408805;MQB=0.0976169;MQSB=0;RPB=0.658928;SGB=13.4442;VDB=0.812964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V1078L|1338|LOC_Os01g54690|protein_coding|CODING|LOC_Os01g54690.1|4|1) FN2252-S.SNP.1:31472822 chr01:031472822 0 W/31472822-31472822 FN2252-S SNP T -> A AC=2;AN=190;BQB=0.979923;DP=4090;DP4=2243,1393,29,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.13777e-20;MQSB=0.0311298;RPB=0.889023;SGB=42.958;VDB=0.925866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.1:31476099 chr01:031476099 0 W/31476099-31476099 FN2198-S SNP G -> T AC=1;AN=190;BQB=0.217209;DP=3664;DP4=1750,1580,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89707e-06;MQSB=0.0318486;RPB=0.466005;SGB=44.5415;VDB=0.939949;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q308K|682|LOC_Os01g54700|protein_coding|CODING|LOC_Os01g54700.1|2|1) FN3834-S.SNP.1:31476191 chr01:031476191 0 W/31476191-31476191 FN3834-S SNP G -> C AC=1;AN=190;BQB=0.638848;DP=3013;DP4=1562,1347,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.87702e-08;MQSB=0.996351;RPB=0.0330071;SGB=49.0954;VDB=0.383964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A277G|682|LOC_Os01g54700|protein_coding|CODING|LOC_Os01g54700.1|2|1) FN478-S.SNP.1:31482026 chr01:031482026 0 W/31482026-31482026 FN478-S Single Base Substitution A-T INTRON HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3662-S.SNP.1:31482276 chr01:031482276 0 W/31482276-31482276 FN3662-S SNP T -> C AC=2;AN=190;BQB=0.92948;DP=2606;DP4=1182,1278,6,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.59326e-06;MQSB=0.994551;RPB=0.991066;SGB=53.6492;VDB=0.385426;EFF=INTRON(MODIFIER||||448|LOC_Os01g54714|protein_coding|CODING|LOC_Os01g54714.1|2|1) FN2677-S.SNP.1:31494648 chr01:031494648 0 W/31494648-31494648 FN2677-S SNP A -> G AC=1;AN=200;BQB=0.975267;DP=4752;DP4=2300,2305,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53149e-09;MQSB=0.987483;RPB=0.270493;SGB=58.8698;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.1:31513411 chr01:031513411 0 W/31513411-31513411 FN3914-S SNP T -> C AC=2;AN=158;BQB=0.99914;DP=2116;DP4=981,1016,9,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.6211e-08;MQSB=0.973064;RPB=0.994427;SGB=60.1755;VDB=0.256416;EFF=INTRON(MODIFIER||||361|LOC_Os01g54784|protein_coding|CODING|LOC_Os01g54784.1|3|1) FN2198-S.SNP.1:31513464 chr01:031513464 0 W/31513464-31513464 FN2198-S SNP A -> G AC=1;AN=190;BQB=0.0034144;DP=4731;DP4=2295,2049,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000211372;MQB=4.79042e-05;MQSB=0.49977;RPB=0.208404;SGB=-2.10437;VDB=0.211022;EFF=INTRON(MODIFIER||||361|LOC_Os01g54784|protein_coding|CODING|LOC_Os01g54784.1|3|1) FN-380.SNP.1:31514168 chr01:031514168 0 W/31514168-31514168 FN-380 Single Base Substitution T-A INTRON HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2364.SNP.1:31537939 chr01:031537939 0 W/31537939-31537939 FN2364 SNP A -> G AC=1;AN=192;BQB=0.999764;DP=4851;DP4=2277,2062,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.06056e-17;MQSB=0.96762;RPB=0.806203;SGB=103.938;VDB=0.710277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S350P|1571|LOC_Os01g54830|protein_coding|CODING|LOC_Os01g54830.1|3|1) FN1336-S.SNP.1:31538181 chr01:031538181 0 W/31538181-31538181 FN1336-S Single Base Substitution T-C INTRON HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2529-S.SNP.1:31538233 chr01:031538233 0 W/31538233-31538233 FN2529-S SNP T -> C AC=2;AN=198;BQB=0.987152;DP=4375;DP4=2044,2021,14,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.00176e-16;MQSB=0.868842;RPB=0.96437;SGB=60.4858;VDB=0.645497;EFF=INTRON(MODIFIER||||1571|LOC_Os01g54830|protein_coding|CODING|LOC_Os01g54830.1|2|1) FN2629-S.SNP.1:31540518 chr01:031540518 0 W/31540518-31540518 FN2629-S SNP C -> G AC=1;AN=200;BQB=0.649434;DP=5043;DP4=2459,2338,12,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00237954;MQB=2.61819e-11;MQSB=0.558684;RPB=0.634273;SGB=72.7161;VDB=0.198215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.1:31546841 chr01:031546841 0 W/31546841-31546841 FN1282-S Single Base Substitution T-C INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2167-S.SNP.1:31555742 chr01:031555742 0 W/31555742-31555742 FN2167-S SNP A -> T AC=1;AN=168;BQB=0.0221532;DP=3626;DP4=1725,1859,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.2576e-07;MQSB=0.999542;RPB=0.884959;SGB=-103.201;VDB=0.643612;EFF=INTRON(MODIFIER||||389|LOC_Os01g54860|protein_coding|CODING|LOC_Os01g54860.1|4|1) FN973-S.SNP.1:31559922 chr01:031559922 0 W/31559922-31559922 FN973-S Single Base Substitution A-T INTRON HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2203-S.SNP.1:31561187 chr01:031561187 0 W/31561187-31561187 FN2203-S SNP A -> G AC=1;AN=190;BQB=0.886559;DP=4743;DP4=2591,1846,25,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2028e-19;MQSB=0.894677;RPB=0.953917;SGB=117.84;VDB=0.214536;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.1:31561398 chr01:031561398 0 W/31561398-31561398 W426-1-1 Single Base Substitution A-T UTR_3_PRIME HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1450-S.SNP.1:31563020 chr01:031563020 0 W/31563020-31563020 FN1450-S Single Base Substitution T-G INTRON HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN2339.SNP.1:31565046 chr01:031565046 0 W/31565046-31565046 FN2339 SNP C -> T AC=1;AN=192;BQB=0.41355;DP=4586;DP4=2172,2036,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44707e-08;MQSB=0.288042;RPB=0.978944;SGB=50.4731;VDB=0.0749993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.1:31566848 chr01:031566848 0 W/31566848-31566848 FN1009-S Single Base Substitution C-T INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN4010-S.SNP.1:31567978 chr01:031567978 0 W/31567978-31567978 FN4010-S SNP C -> T AC=1;AN=168;BQB=0.975476;DP=2488;DP4=921,1423,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.72824e-06;MQSB=0.517926;RPB=0.651436;SGB=56.6036;VDB=0.680107;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L30|237|LOC_Os01g54890|protein_coding|CODING|LOC_Os01g54890.1|1|1) FN2360.SNP.1:31582440 chr01:031582440 0 W/31582440-31582440 FN2360 SNP A -> G AC=1;AN=192;BQB=0.4557;DP=5262;DP4=2574,2276,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.79957e-09;MQSB=0.767663;RPB=0.226166;SGB=-10.8182;VDB=0.114398;EFF=INTRON(MODIFIER||||673|LOC_Os01g54910|protein_coding|CODING|LOC_Os01g54910.1|18|1) FN478-S.SNP.1:31590909 chr01:031590909 0 W/31590909-31590909 FN478-S Single Base Substitution C-T INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN4133-S.SNP.1:31597040 chr01:031597040 0 W/31597040-31597040 FN4133-S SNP G -> A AC=1;AN=182;BQB=0.898854;DP=2220;DP4=1591,445,10,3;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=1.84099e-05;MQSB=4.32781e-31;RPB=0.807133;SGB=53.1331;VDB=0.534909;EFF=UTR_5_PRIME(MODIFIER||697||429|LOC_Os01g54930|protein_coding|CODING|LOC_Os01g54930.1|1|1) FN2232-S.SNP.1:31607431 chr01:031607431 0 W/31607431-31607431 FN2232-S SNP T -> A AC=1;AN=190;BQB=0.282328;DP=3871;DP4=1779,1523,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.39765e-05;MQSB=0.274555;RPB=0.956169;SGB=5.66499;VDB=0.478325;EFF=START_GAINED(LOW||||206|LOC_Os01g54950|protein_coding|CODING|LOC_Os01g54950.1|1|1),UTR_5_PRIME(MODIFIER||57||206|LOC_Os01g54950|protein_coding|CODING|LOC_Os01g54950.1|1|1) FN-34.SNP.1:31611022 chr01:031611022 0 W/31611022-31611022 FN-34 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN2432.SNP.1:31612603 chr01:031612603 0 W/31612603-31612603 FN2432 SNP T -> A AC=2;AN=200;BQB=0.985434;DP=4389;DP4=1288,2606,14,21;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0710868;MQB=1.81274e-05;MQSB=0;RPB=0.962566;SGB=115.978;VDB=0.560027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.1:31612604 chr01:031612604 0 W/31612604-31612604 FN2432 SNP C -> G AC=2;AN=200;BQB=0.801031;DP=4383;DP4=1467,2595,16,22;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0762035;MQB=0.000533358;MQSB=0;RPB=0.958679;SGB=126.794;VDB=0.748444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.1:31614244 chr01:031614244 0 W/31614244-31614244 FN3748-S SNP G -> T AC=2;AN=190;BQB=0.0664674;DP=2769;DP4=1277,1377,9,8;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.0931744;MQB=0.64124;MQSB=1.50994e-09;RPB=0.180348;SGB=50.3161;VDB=0.150507;EFF=INTRON(MODIFIER||||121|LOC_Os01g54980|protein_coding|CODING|LOC_Os01g54980.1|2|1),INTRON(MODIFIER||||121|LOC_Os01g54980|protein_coding|CODING|LOC_Os01g54980.2|2|1) FN3748-S.SNP.1:31614245 chr01:031614245 0 W/31614245-31614245 FN3748-S SNP C -> T AC=2;AN=190;BQB=0.158714;DP=2770;DP4=1278,1375,10,6;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.0960289;MQB=0.800531;MQSB=4.63479e-10;RPB=0.39979;SGB=46.7622;VDB=0.421894;EFF=INTRON(MODIFIER||||121|LOC_Os01g54980|protein_coding|CODING|LOC_Os01g54980.1|2|1),INTRON(MODIFIER||||121|LOC_Os01g54980|protein_coding|CODING|LOC_Os01g54980.2|2|1) FN4083-S.SNP.1:31624818 chr01:031624818 0 W/31624818-31624818 FN4083-S SNP T -> A AC=2;AN=182;BQB=0.954897;DP=3033;DP4=1328,1504,26,35;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.77431e-29;MQSB=0.946647;RPB=0.740482;SGB=229.155;VDB=0.0411221;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.1:31632574 chr01:031632574 0 W/31632574-31632574 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2595-S.SNP.1:31634888 chr01:031634888 0 W/31634888-31634888 FN2595-S SNP G -> C AC=1;AN=198;BQB=0.766379;DP=3599;DP4=1576,1527,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.43643e-05;MQSB=0.738173;RPB=0.768143;SGB=35.7638;VDB=0.938151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S77R|297|LOC_Os01g55010|protein_coding|CODING|LOC_Os01g55010.1|1|1) FN3546-S.SNP.1:31635479 chr01:031635479 0 W/31635479-31635479 FN3546-S SNP A -> T AC=1;AN=188;BQB=0.873224;DP=3936;DP4=1742,1993,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.43709e-06;MQSB=0.98592;RPB=0.822517;SGB=28.8977;VDB=0.0813279;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.1:31636038 chr01:031636038 0 W/31636038-31636038 FN2765-S SNP T -> G AC=1;AN=198;BQB=0.995032;DP=3875;DP4=1786,1816,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.51462e-12;MQSB=0.975425;RPB=0.841697;SGB=90.9049;VDB=0.62228;EFF=INTRON(MODIFIER||||99|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.2|2|1),INTRON(MODIFIER||||99|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.1|2|1),INTRON(MODIFIER||||99|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.3|2|1),INTRON(MODIFIER||||99|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.6|2|1),INTRON(MODIFIER||||95|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.4|2|1),INTRON(MODIFIER||||95|LOC_Os01g55020|protein_coding|CODING|LOC_Os01g55020.5|2|1) FN-359.SNP.1:31660693 chr01:031660693 0 W/31660693-31660693 FN-359 Single Base Substitution T-C INTERGENIC HOMO SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN760-S.SNP.1:31678330 chr01:031678330 0 W/31678330-31678330 FN760-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3666-S.SNP.1:31679307 chr01:031679307 0 W/31679307-31679307 FN3666-S SNP C -> G AC=1;AN=190;BQB=0.721823;DP=2614;DP4=1043,1458,6,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.27706e-12;MQSB=0.989146;RPB=0.652574;SGB=85.8548;VDB=0.955739;EFF=INTRON(MODIFIER||||735|LOC_Os01g55094|protein_coding|CODING|LOC_Os01g55094.2|16|1) FN1519-S.SNP.1:31681385 chr01:031681385 0 W/31681385-31681385 FN1519-S Single Base Substitution A-T UTR_3_PRIME Homo SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2130-S.SNP.1:31682852 chr01:031682852 0 W/31682852-31682852 FN2130-S SNP C -> A AC=1;AN=168;BQB=0.166526;DP=4459;DP4=2068,2354,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.15262e-05;MQSB=0.83891;RPB=0.11101;SGB=-58.653;VDB=0.748926;EFF=INTRON(MODIFIER||||735|LOC_Os01g55094|protein_coding|CODING|LOC_Os01g55094.1|15|1),INTRON(MODIFIER||||735|LOC_Os01g55094|protein_coding|CODING|LOC_Os01g55094.2|15|1),INTRON(MODIFIER||||715|LOC_Os01g55094|protein_coding|CODING|LOC_Os01g55094.3|14|1) FN4122-S.SNP.1:31692483 chr01:031692483 0 W/31692483-31692483 FN4122-S SNP G -> T AC=1;AN=182;BQB=0.833969;DP=2274;DP4=921,1273,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.41619e-08;MQSB=0.431405;RPB=0.0506567;SGB=32.1169;VDB=0.162982;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.1:31692484 chr01:031692484 0 W/31692484-31692484 FN4122-S SNP A -> T AC=1;AN=182;BQB=0.274598;DP=2274;DP4=892,1239,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.53336e-07;MQSB=0.540224;RPB=0.0672823;SGB=44.1115;VDB=0.274778;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.1:31693091 chr01:031693091 0 W/31693091-31693091 FN533-S Single Base Substitution C-T INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN-67.SNP.1:31697854 chr01:031697854 0 W/31697854-31697854 FN-67 Single Base Substitution C-T INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN4052-S.SNP.1:31702713 chr01:031702713 0 W/31702713-31702713 FN4052-S SNP G -> A AC=1;AN=168;BQB=0.883332;DP=2548;DP4=1115,1283,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15468e-11;MQSB=0.994181;RPB=0.905964;SGB=72.4869;VDB=0.451039;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.1:31702791 chr01:031702791 0 W/31702791-31702791 FN424-S Single Base Substitution G-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1458-S.SNP.1:31704951 chr01:031704951 0 W/31704951-31704951 FN1458-S Single Base Substitution C-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-246.SNP.1:31709282 chr01:031709282 0 W/31709282-31709282 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-161.SNP.1:31715366 chr01:031715366 0 W/31715366-31715366 FN-161 Single Base Substitution C-G INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2758-S.SNP.1:31715795 chr01:031715795 0 W/31715795-31715795 FN2758-S SNP G -> T AC=2;AN=200;BQB=0.857314;DP=4464;DP4=2122,2040,22,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.32286e-27;MQSB=0.955386;RPB=0.463524;SGB=162.845;VDB=0.515292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.1:31719393 chr01:031719393 0 W/31719393-31719393 FN1744-S SNP T -> G AC=1;AN=188;BQB=0.733835;DP=1665;DP4=722,847,1,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00855235;MQSB=0.905034;RPB=0.639531;SGB=-34.1676;VDB=0.182601;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E139A|588|LOC_Os01g55120|protein_coding|CODING|LOC_Os01g55120.1|1|1) FN2619-S.SNP.1:31720782 chr01:031720782 0 W/31720782-31720782 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.597347;DP=4172;DP4=1945,1991,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66201e-11;MQSB=0.653411;RPB=0.249851;SGB=72.5051;VDB=0.13549;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.1:31723502 chr01:031723502 0 W/31723502-31723502 FN510-S Single Base Substitution G-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3910-S.SNP.1:31723948 chr01:031723948 0 W/31723948-31723948 FN3910-S SNP C -> T AC=1;AN=158;BQB=0.981526;DP=2730;DP4=1444,1174,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04233e-06;MQSB=0.954335;RPB=0.616891;SGB=9.60209;VDB=0.546507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.1:31733284 chr01:031733284 0 W/31733284-31733284 FN1082-S Single Base Substitution G-C INTERGENIC HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN2680-S.SNP.1:31737521 chr01:031737521 0 W/31737521-31737521 FN2680-S SNP G -> T AC=1;AN=200;BQB=0.80876;DP=5022;DP4=2343,2445,18,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18009e-23;MQSB=0.967535;RPB=0.354871;SGB=123.188;VDB=0.230152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.1:31742972 chr01:031742972 0 W/31742972-31742972 FN3844-S SNP C -> A AC=1;AN=190;BQB=0.950835;DP=3143;DP4=1682,1328,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15432e-11;MQSB=0.272731;RPB=0.893613;SGB=64.5316;VDB=0.71725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.1:31743381 chr01:031743381 0 W/31743381-31743381 FN2403 SNP C -> T AC=1;AN=200;BQB=0.542972;DP=4727;DP4=2259,2077,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32458e-08;MQSB=0.846127;RPB=0.124764;SGB=4.67442;VDB=0.288932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.1:31745819 chr01:031745819 0 W/31745819-31745819 FN3797-S SNP C -> A AC=1;AN=190;BQB=0.965502;DP=2958;DP4=1385,1462,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13476e-06;MQSB=0.896583;RPB=0.993796;SGB=39.9877;VDB=0.949958;EFF=INTRON(MODIFIER||||240|LOC_Os01g55180|protein_coding|CODING|LOC_Os01g55180.1|3|1) FN813-S.SNP.1:31747376 chr01:031747376 0 W/31747376-31747376 FN813-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g55180 expressed protein SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN734-S.SNP.1:31752113 chr01:031752113 0 W/31752113-31752113 FN734-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g55190 expressed protein SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1497-S.SNP.1:31759553 chr01:031759553 0 W/31759553-31759553 FN1497-S Single Base Substitution G-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3887-S.SNP.1:31765531 chr01:031765531 0 W/31765531-31765531 FN3887-S SNP T -> C AC=1;AN=158;BQB=0.975944;DP=2159;DP4=1165,800,10,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.51489e-13;MQSB=0.754362;RPB=0.98943;SGB=40.4048;VDB=0.92686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.1:31771745 chr01:031771745 0 W/31771745-31771745 FN1180-S Single Base Substitution G-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3757-S.SNP.1:31771745 chr01:031771745 0 W/31771745-31771745 FN3757-S SNP G -> T AC=1;AN=190;BQB=0.362283;DP=2934;DP4=1237,1566,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00238582;MQB=0.000402327;MQSB=0.0173123;RPB=0.114272;SGB=23.6597;VDB=0.0840807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.1:31771745 chr01:031771745 0 W/31771745-31771745 FN3991-S SNP G -> T AC=1;AN=168;BQB=0.657688;DP=2906;DP4=1229,1540,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00309704;MQB=7.32874e-06;MQSB=0.0127995;RPB=0.700327;SGB=4.1907;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.1:31772147 chr01:031772147 0 W/31772147-31772147 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.994964;DP=2752;DP4=1189,1414,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08549e-09;MQSB=0.940917;RPB=0.685015;SGB=46.7622;VDB=0.853356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.1:31780580 chr01:031780580 0 W/31780580-31780580 FN2756-S SNP T -> A AC=1;AN=200;BQB=0.845322;DP=4960;DP4=2347,2342,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.70523e-15;MQSB=0.877552;RPB=0.950574;SGB=19.1209;VDB=0.062695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.1:31781842 chr01:031781842 0 W/31781842-31781842 FN1448-S Single Base Substitution G-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3598-S.SNP.1:31790513 chr01:031790513 0 W/31790513-31790513 FN3598-S SNP C -> A AC=2;AN=188;BQB=0.0469331;DP=4054;DP4=1863,2054,24,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.7339e-12;MQSB=0.999991;RPB=0.980937;SGB=194.364;VDB=0.794346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.1:31791955 chr01:031791955 0 W/31791955-31791955 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.60119;DP=3516;DP4=1916,1356,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000568828;MQB=1.24174e-10;MQSB=0.000495763;RPB=0.999185;SGB=42.3199;VDB=0.360515;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.1:31793382 chr01:031793382 0 W/31793382-31793382 FN988-S Single Base Substitution C-T INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2235-S.SNP.1:31793625 chr01:031793625 0 W/31793625-31793625 FN2235-S SNP C -> G AC=1;AN=190;BQB=0.394261;DP=4438;DP4=2183,1954,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07461e-10;MQSB=0.231623;RPB=0.999094;SGB=19.6499;VDB=0.665945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.1:31799305 chr01:031799305 0 W/31799305-31799305 FN1440-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN1241-S.SNP.1:31801672 chr01:031801672 0 W/31801672-31801672 FN1241-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1527-S.SNP.1:31805080 chr01:031805080 0 W/31805080-31805080 FN1527-S Single Base Substitution C-T INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN_N1-26-1.SNP.1:31805080 chr01:031805080 0 W/31805080-31805080 FN_N1-26-1 Single Base Substitution C-T Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN2377.SNP.1:31809989 chr01:031809989 0 W/31809989-31809989 FN2377 SNP T -> A AC=1;AN=192;BQB=0.999827;DP=4925;DP4=2331,2280,20,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.22368e-22;MQSB=0.937406;RPB=0.887229;SGB=43.3348;VDB=0.718633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I203N|386|LOC_Os01g55260|protein_coding|CODING|LOC_Os01g55260.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I123N|306|LOC_Os01g55260|protein_coding|CODING|LOC_Os01g55260.2|7|1) FN889-S.SNP.1:31811657 chr01:031811657 0 W/31811657-31811657 FN889-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g55270 SGS domain containing protein, expressed SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN3871-S.SNP.1:31814633 chr01:031814633 0 W/31814633-31814633 FN3871-S SNP A -> G AC=2;AN=158;BQB=0.934205;DP=2720;DP4=872,1423,15,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.70097e-14;MQSB=0.72564;RPB=0.958191;SGB=-160.079;VDB=0.745472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.1:31819458 chr01:031819458 0 W/31819458-31819458 FN1337-S Single Base Substitution C-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2649-S.SNP.1:31822101 chr01:031822101 0 W/31822101-31822101 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.95124;DP=4304;DP4=1950,2121,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32973e-16;MQSB=0.859177;RPB=0.336992;SGB=83.5316;VDB=0.651071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.1:31823343 chr01:031823343 0 W/31823343-31823343 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.985293;DP=2530;DP4=1167,1276,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83933e-05;MQSB=0.848265;RPB=0.693873;SGB=30.8063;VDB=0.457239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.1:31829407 chr01:031829407 0 W/31829407-31829407 FN2756-S SNP A -> T AC=1;AN=200;BQB=0.963709;DP=5074;DP4=2573,2249,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.22621e-12;MQSB=0.997652;RPB=0.565866;SGB=-10.6896;VDB=0.00487892;EFF=INTRON(MODIFIER||||295|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.1|2|1),INTRON(MODIFIER||||295|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.2|2|1),INTRON(MODIFIER||||213|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.3|3|1) FN2756-S.SNP.1:31829408 chr01:031829408 0 W/31829408-31829408 FN2756-S SNP C -> T AC=1;AN=200;BQB=0.532797;DP=5076;DP4=2572,2249,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78664e-14;MQSB=0.975943;RPB=0.623927;SGB=15.9106;VDB=0.01525;EFF=INTRON(MODIFIER||||295|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.1|2|1),INTRON(MODIFIER||||295|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.2|2|1),INTRON(MODIFIER||||213|LOC_Os01g55290|protein_coding|CODING|LOC_Os01g55290.3|3|1) FN-241.SNP.1:31833974 chr01:031833974 0 W/31833974-31833974 FN-241 Single Base Substitution G-A INTRON HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1282-S.SNP.1:31836183 chr01:031836183 0 W/31836183-31836183 FN1282-S Single Base Substitution A-T INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3536-S.SNP.1:31842232 chr01:031842232 0 W/31842232-31842232 FN3536-S SNP A -> G AC=1;AN=188;BQB=0.562757;DP=2891;DP4=1238,1421,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000345901;MQB=5.81718e-05;MQSB=0.990272;RPB=0.391256;SGB=28.8977;VDB=0.628403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.1:31842365 chr01:031842365 0 W/31842365-31842365 FN1163-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN-295.SNP.1:31843836 chr01:031843836 0 W/31843836-31843836 FN-295 Single Base Substitution T-C INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2625-S.SNP.1:31845513 chr01:031845513 0 W/31845513-31845513 FN2625-S SNP C -> T AC=2;AN=200;BQB=0.971884;DP=4934;DP4=2523,2104,21,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.53127e-26;MQSB=0.99712;RPB=0.965309;SGB=206.235;VDB=0.35867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.1:31846608 chr01:031846608 0 W/31846608-31846608 FN2768-S SNP C -> G AC=1;AN=198;BQB=0.770812;DP=3654;DP4=1954,1506,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02716e-11;MQSB=0.767626;RPB=0.599856;SGB=54.5295;VDB=0.331828;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G59|131|LOC_Os01g55330|protein_coding|CODING|LOC_Os01g55330.1|1|1) FN-189.SNP.1:31847859 chr01:031847859 0 W/31847859-31847859 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1283-S.SNP.1:31848320 chr01:031848320 0 W/31848320-31848320 FN1283-S Single Base Substitution C-T INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4221-S.SNP.1:31858293 chr01:031858293 0 W/31858293-31858293 FN4221-S SNP A -> G AC=1;AN=170;BQB=0.932982;DP=2635;DP4=1422,1119,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.93511e-11;MQSB=0.963666;RPB=0.46936;SGB=70.0854;VDB=0.411493;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.1:31862253 chr01:031862253 0 W/31862253-31862253 FN758-S Single Base Substitution T-C INTRON HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2530-S.SNP.1:31862607 chr01:031862607 0 W/31862607-31862607 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.855251;DP=4013;DP4=1832,2011,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.79713e-11;MQSB=0.96796;RPB=0.939701;SGB=67.9293;VDB=0.431665;EFF=SPLICE_SITE_DONOR(HIGH||||924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|7|1),INTRON(MODIFIER||||924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|7|1);LOF=(LOC_Os01g55350|LOC_Os01g55350|1|1.00) FN2530-S.SNP.1:31862610 chr01:031862610 0 W/31862610-31862610 FN2530-S SNP C -> G AC=1;AN=198;BQB=0.635773;DP=4037;DP4=1853,1997,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.36351e-11;MQSB=0.98734;RPB=0.999927;SGB=29.3443;VDB=0.772575;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E282Q|924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|7|1),SPLICE_SITE_REGION(LOW||||924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|7|1) FN3396-S.SNP.1:31864910 chr01:031864910 0 W/31864910-31864910 FN3396-S SNP A -> T AC=1;AN=184;BQB=0.0791805;DP=2230;DP4=924,1096,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.78361e-05;MQSB=0.581672;RPB=0.991508;SGB=2.23696;VDB=0.861419;EFF=SPLICE_SITE_REGION(LOW||||924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|2|1),UTR_5_PRIME(MODIFIER||38||924|LOC_Os01g55350|protein_coding|CODING|LOC_Os01g55350.1|2|1) FN940-S.SNP.1:31866162 chr01:031866162 0 W/31866162-31866162 FN940-S Single Base Substitution A-T INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-213.SNP.1:31868002 chr01:031868002 0 W/31868002-31868002 FN-213 Single Base Substitution C-A INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN_N1-169-1.SNP.1:31870197 chr01:031870197 0 W/31870197-31870197 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1032-S.SNP.1:31871685 chr01:031871685 0 W/31871685-31871685 FN1032-S Single Base Substitution T-C INTRON HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2108-S.SNP.1:31874949 chr01:031874949 0 W/31874949-31874949 FN2108-S SNP A -> T AC=1;AN=168;BQB=0.256409;DP=4255;DP4=2032,2185,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.19255e-10;MQSB=0.989293;RPB=0.663081;SGB=17.068;VDB=0.913185;EFF=INTRON(MODIFIER||||425|LOC_Os01g55360|protein_coding|CODING|LOC_Os01g55360.1|4|1),INTRON(MODIFIER||||425|LOC_Os01g55360|protein_coding|CODING|LOC_Os01g55360.2|4|1),INTRON(MODIFIER||||425|LOC_Os01g55360|protein_coding|CODING|LOC_Os01g55360.3|4|1),INTRON(MODIFIER||||324|LOC_Os01g55360|protein_coding|CODING|LOC_Os01g55360.4|4|1) FN-148.SNP.1:31880734 chr01:031880734 0 W/31880734-31880734 FN-148 Single Base Substitution T-C INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1301-S.SNP.1:31884750 chr01:031884750 0 W/31884750-31884750 FN1301-S Single Base Substitution G-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2276-S.SNP.1:31899715 chr01:031899715 0 W/31899715-31899715 FN2276-S SNP C -> T AC=1;AN=190;BQB=0.574961;DP=4589;DP4=2259,2039,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53842e-09;MQSB=0.640184;RPB=0.68483;SGB=85.5263;VDB=0.722787;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.1:31904555 chr01:031904555 0 W/31904555-31904555 FN911-S Single Base Substitution C-T INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN4165-S.SNP.1:31906338 chr01:031906338 0 W/31906338-31906338 FN4165-S SNP G -> A AC=1;AN=170;BQB=1;DP=2632;DP4=1382,1154,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.35207e-07;MQSB=0.960742;RPB=0.799132;SGB=52.3148;VDB=0.897987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.1:31913967 chr01:031913967 0 W/31913967-31913967 FN1094-S Single Base Substitution C-G INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3725-S.SNP.1:31918102 chr01:031918102 0 W/31918102-31918102 FN3725-S SNP C -> T AC=2;AN=190;BQB=0.951271;DP=2162;DP4=1063,989,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.92703e-15;MQSB=0.964912;RPB=0.95289;SGB=112.85;VDB=0.915016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A55T|142|LOC_Os01g55400|protein_coding|CODING|LOC_Os01g55400.1|1|1) FN419-S.SNP.1:31918477 chr01:031918477 0 W/31918477-31918477 FN419-S Single Base Substitution G-T INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN509-S.SNP.1:31922713 chr01:031922713 0 W/31922713-31922713 FN509-S Single Base Substitution T-C INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1319-S.SNP.1:31924378 chr01:031924378 0 W/31924378-31924378 FN1319-S Single Base Substitution G-A INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN-380.SNP.1:31929467 chr01:031929467 0 W/31929467-31929467 FN-380 Single Base Substitution G-C INTRON HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3795-S.SNP.1:31930831 chr01:031930831 0 W/31930831-31930831 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.694337;DP=2676;DP4=1245,1339,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43327e-08;MQSB=0.987153;RPB=0.805541;SGB=36.1006;VDB=0.540608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.1:31931304 chr01:031931304 0 W/31931304-31931304 FN1528-S Single Base Substitution C-T INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3978-S.SNP.1:31935092 chr01:031935092 0 W/31935092-31935092 FN3978-S SNP T -> C AC=1;AN=168;BQB=0.520492;DP=3039;DP4=1392,1491,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00691017;MQB=0.00803462;MQSB=0.973764;RPB=0.965348;SGB=72.4869;VDB=0.738738;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.1:31942738 chr01:031942738 0 W/31942738-31942738 FN490-S Single Base Substitution T-G INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN1320-S.SNP.1:31950482 chr01:031950482 0 W/31950482-31950482 FN1320-S Single Base Substitution G-C INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1571-S.SNP.1:31955079 chr01:031955079 0 W/31955079-31955079 FN1571-S Single Base Substitution A-G INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-176.SNP.1:31956611 chr01:031956611 0 W/31956611-31956611 FN-176 Single Base Substitution C-T INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN4271-S.SNP.1:31960300 chr01:031960300 0 W/31960300-31960300 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.921403;DP=2602;DP4=1280,1235,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00038432;MQB=1.43064e-06;MQSB=0.427248;RPB=0.88074;SGB=45.206;VDB=0.641471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S145P|932|LOC_Os01g55470|protein_coding|CODING|LOC_Os01g55470.1|2|1) FN1279-S.SNP.1:31961201 chr01:031961201 0 W/31961201-31961201 FN1279-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3909-S.SNP.1:31963157 chr01:031963157 0 W/31963157-31963157 FN3909-S SNP C -> G AC=2;AN=158;BQB=0.971904;DP=2525;DP4=1284,1125,17,14;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=2.48167e-08;MQSB=0.132107;RPB=0.546508;SGB=130.087;VDB=0.376523;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G792R|921|LOC_Os01g55480|protein_coding|CODING|LOC_Os01g55480.1|3|1) FN2702-S.SNP.1:31966235 chr01:031966235 0 W/31966235-31966235 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.919955;DP=3177;DP4=849,2145,0,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00849858;MQB=0.000284428;MQSB=1.84635e-08;RPB=0.997336;SGB=40.4492;VDB=0.317029;EFF=INTERGENIC(MODIFIER||||||||||1) FN-315.SNP.1:31983844 chr01:031983844 0 W/31983844-31983844 FN-315 Single Base Substitution G-C INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2408.SNP.1:31983875 chr01:031983875 0 W/31983875-31983875 FN2408 SNP C -> T AC=1;AN=200;BQB=0.0531189;DP=3277;DP4=1043,1728,2,15;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000610314;MQB=3.533e-05;MQSB=9.58984e-12;RPB=0.0557582;SGB=72.6852;VDB=0.281354;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.1:31995305 chr01:031995305 0 W/31995305-31995305 FN684-S Single Base Substitution T-G INTRON HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN3971-S.SNP.1:31996866 chr01:031996866 0 W/31996866-31996866 FN3971-S SNP T -> C AC=1;AN=168;BQB=0.961747;DP=2468;DP4=1058,1293,2,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00027349;MQSB=0.949423;RPB=0.971621;SGB=21.16;VDB=0.749879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.1:31998735 chr01:031998735 0 W/31998735-31998735 FN1522-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN3332-S.SNP.1:31999122 chr01:031999122 0 W/31999122-31999122 FN3332-S SNP C -> A AC=1;AN=184;BQB=0.774518;DP=2643;DP4=1258,1298,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42516e-06;MQSB=0.946353;RPB=0.754889;SGB=53.2642;VDB=0.764835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A454S|460|LOC_Os01g55540|protein_coding|CODING|LOC_Os01g55540.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A451S|457|LOC_Os01g55540|protein_coding|CODING|LOC_Os01g55540.2|12|1) FN2411.SNP.1:32003946 chr01:032003946 0 W/32003946-32003946 FN2411 SNP C -> T AC=1;AN=200;BQB=0.658323;DP=5410;DP4=2884,2121,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.615e-11;MQSB=0.999283;RPB=0.292425;SGB=39.9056;VDB=0.0866424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1513-S.SNP.1:32006254 chr01:032006254 0 W/32006254-32006254 FN1513-S Single Base Substitution C-G INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1170-S.SNP.1:32016671 chr01:032016671 0 W/32016671-32016671 FN1170-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2721-S.SNP.1:32023918 chr01:032023918 0 W/32023918-32023918 FN2721-S SNP T -> C AC=2;AN=200;BQB=0.392753;DP=4726;DP4=2047,2481,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.0397e-18;MQSB=0.969552;RPB=0.257769;SGB=101.557;VDB=0.0460807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.1:32029300 chr01:032029300 0 W/32029300-32029300 FN1250-S Single Base Substitution A-T INTRON HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1250-S.SNP.1:32029301 chr01:032029301 0 W/32029301-32029301 FN1250-S Single Base Substitution G-T SPLICE_SITE_REGION HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2192-S.SNP.1:32030749 chr01:032030749 0 W/32030749-32030749 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.970966;DP=5163;DP4=2174,2732,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3702e-15;MQSB=0.783261;RPB=0.999876;SGB=49.1985;VDB=0.66238;EFF=INTRON(MODIFIER||||558|LOC_Os01g55590|protein_coding|CODING|LOC_Os01g55590.1|12|1) FN2431.SNP.1:32034041 chr01:032034041 0 W/32034041-32034041 FN2431 SNP T -> G AC=2;AN=200;BQB=0.999956;DP=3756;DP4=1198,1957,13,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15211e-11;MQSB=0.209819;RPB=0.717099;SGB=114.132;VDB=0.221365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y204S|574|LOC_Os01g55600|protein_coding|CODING|LOC_Os01g55600.1|3|1) FN_809-6-1.SNP.1:32037715 chr01:032037715 0 W/32037715-32037715 FN_809-6-1 Single Base Substitution A-G HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN755-S.SNP.1:32038520 chr01:032038520 0 W/32038520-32038520 FN755-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g55610 peptide transporter PTR2, putative, expressed SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2595-S.SNP.1:32042906 chr01:032042906 0 W/32042906-32042906 FN2595-S SNP A -> G AC=1;AN=198;BQB=0.99736;DP=4010;DP4=1858,1917,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8795e-10;MQSB=0.976557;RPB=0.458301;SGB=54.5295;VDB=0.501428;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.1:32043054 chr01:032043054 0 W/32043054-32043054 FN1735-S SNP A -> G AC=1;AN=188;BQB=0.0303971;DP=3845;DP4=1813,1958,7,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.23584e-07;MQSB=0.996424;RPB=0.307851;SGB=-166.713;VDB=0.339694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.1:32049168 chr01:032049168 0 W/32049168-32049168 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1407-S.SNP.1:32051386 chr01:032051386 0 W/32051386-32051386 FN1407-S Single Base Substitution C-G INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN3766-S.SNP.1:32055488 chr01:032055488 0 W/32055488-32055488 FN3766-S SNP T -> C AC=2;AN=190;BQB=0.978007;DP=2655;DP4=1238,1291,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.12324e-13;MQSB=0.998741;RPB=0.571162;SGB=103.742;VDB=0.0981581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.1:32063713 chr01:032063713 0 W/32063713-32063713 FN2660-S SNP T -> A AC=2;AN=200;BQB=0.104025;DP=5003;DP4=2413,2319,9,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07858e-21;MQSB=0.982135;RPB=0.678046;SGB=155.578;VDB=0.507567;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.1:32088096 chr01:032088096 0 W/32088096-32088096 FN846-S Single Base Substitution G-T INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN445-S.SNP.1:32091044 chr01:032091044 0 W/32091044-32091044 FN445-S Single Base Substitution G-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1423-S.SNP.1:32095660 chr01:032095660 0 W/32095660-32095660 FN1423-S Single Base Substitution T-A INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1704-S.SNP.1:32100807 chr01:032100807 0 W/32100807-32100807 FN1704-S SNP A -> T AC=1;AN=188;BQB=1.80692e-06;DP=2003;DP4=1266,555,19,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00317431;MQSB=0.698683;RPB=0.00190517;SGB=-197.506;VDB=0.336147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.1:32113545 chr01:032113545 0 W/32113545-32113545 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.977304;DP=2564;DP4=1104,1329,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53175e-13;MQSB=0.316107;RPB=0.238074;SGB=117.403;VDB=0.851968;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.1:32119800 chr01:032119800 0 W/32119800-32119800 FN485-S Single Base Substitution C-T INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN2331.SNP.1:32131319 chr01:032131319 0 W/32131319-32131319 FN2331 SNP C -> T AC=1;AN=192;BQB=0.331989;DP=4829;DP4=2355,2177,19,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.3887e-14;MQSB=0.92747;RPB=0.993237;SGB=-141.669;VDB=0.917154;EFF=INTRON(MODIFIER||||391|LOC_Os01g55780|protein_coding|CODING|LOC_Os01g55780.1|1|1) FN3580-S.SNP.1:32132723 chr01:032132723 0 W/32132723-32132723 FN3580-S SNP C -> T AC=2;AN=188;BQB=0.97053;DP=2900;DP4=1514,1305,20,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.97527e-18;MQSB=0.955894;RPB=0.611795;SGB=135.302;VDB=0.659606;EFF=INTRON(MODIFIER||||391|LOC_Os01g55780|protein_coding|CODING|LOC_Os01g55780.1|1|1) FN2666-S.SNP.1:32138485 chr01:032138485 0 W/32138485-32138485 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.844612;DP=4574;DP4=1915,2391,5,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61737e-16;MQSB=0.921849;RPB=0.646417;SGB=123.342;VDB=0.178322;EFF=INTRON(MODIFIER||||602|LOC_Os01g55799|protein_coding|CODING|LOC_Os01g55799.1|2|1) FN1422-S.SNP.1:32143498 chr01:032143498 0 W/32143498-32143498 FN1422-S Single Base Substitution T-G INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2774-S.SNP.1:32145202 chr01:032145202 0 W/32145202-32145202 FN2774-S SNP G -> T AC=1;AN=198;BQB=0.778646;DP=3580;DP4=1771,1601,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.29997e-11;MQSB=0.887585;RPB=0.955572;SGB=61.7198;VDB=0.499379;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I28|383|LOC_Os01g55795|protein_coding|CODING|LOC_Os01g55795.1|1|1) FN2080-S.SNP.1:32153541 chr01:032153541 0 W/32153541-32153541 FN2080-S SNP T -> C AC=1;AN=168;BQB=0.374365;DP=3737;DP4=1896,1810,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.4321e-05;MQSB=0.99867;RPB=0.917045;SGB=4.1907;VDB=0.413935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.1:32153821 chr01:032153821 0 W/32153821-32153821 FN1102-S Single Base Substitution A-G INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3095-S.SNP.1:32160332 chr01:032160332 0 W/32160332-32160332 FN3095-S SNP A -> G AC=2;AN=184;BQB=0.17181;DP=3060;DP4=1514,1427,23,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.31536e-15;MQSB=0.989605;RPB=0.523555;SGB=175.352;VDB=0.264163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.1:32161313 chr01:032161313 0 W/32161313-32161313 FN1416-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3772-S.SNP.1:32168528 chr01:032168528 0 W/32168528-32168528 FN3772-S SNP G -> A AC=1;AN=190;BQB=0.867724;DP=2593;DP4=1238,1256,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.82982e-08;MQSB=0.998562;RPB=0.969487;SGB=49.0954;VDB=0.122175;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S126|382|LOC_Os01g55860|protein_coding|CODING|LOC_Os01g55860.1|2|1) FN1566-S.SNP.1:32174517 chr01:032174517 0 W/32174517-32174517 FN1566-S Single Base Substitution C-T INTRON Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN969-S.SNP.1:32177648 chr01:032177648 0 W/32177648-32177648 FN969-S Single Base Substitution T-C INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN3446-S.SNP.1:32183407 chr01:032183407 0 W/32183407-32183407 FN3446-S SNP C -> G AC=2;AN=184;BQB=0.866647;DP=3417;DP4=2060,1223,19,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.53366e-15;MQSB=0.975466;RPB=0.721383;SGB=125.613;VDB=0.0863124;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.1:32189009 chr01:032189009 0 W/32189009-32189009 FN_N2-29a-1 Single Base Substitution G-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3446-S.SNP.1:32193189 chr01:032193189 0 W/32193189-32193189 FN3446-S SNP T -> C AC=2;AN=184;BQB=0.931967;DP=3005;DP4=1429,1407,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08835e-16;MQSB=0.99921;RPB=0.951705;SGB=56.0583;VDB=0.747629;EFF=UTR_3_PRIME(MODIFIER||373||178|LOC_Os01g55900|protein_coding|CODING|LOC_Os01g55900.1|7|1) FN1140-S.SNP.1:32193384 chr01:032193384 0 W/32193384-32193384 FN1140-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1140-S.SNP.1:32193387 chr01:032193387 0 W/32193387-32193387 FN1140-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN355-S.SNP.1:32200461 chr01:032200461 0 W/32200461-32200461 FN355-S Single Base Substitution C-G INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN355-S.SNP.1:32200463 chr01:032200463 0 W/32200463-32200463 FN355-S Single Base Substitution T-C INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN355-S.SNP.1:32200468 chr01:032200468 0 W/32200468-32200468 FN355-S Single Base Substitution T-A INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3306-S.SNP.1:32205208 chr01:032205208 0 W/32205208-32205208 FN3306-S SNP C -> A AC=2;AN=184;BQB=0.533633;DP=1073;DP4=468,450,10,3;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0232992;MQB=0.0667546;MQSB=0.177456;RPB=0.385109;SGB=53.2642;VDB=0.833674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.1:32211499 chr01:032211499 0 W/32211499-32211499 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.884167;DP=3879;DP4=2468,1293,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0752771;MQB=0.467049;MQSB=2.99049e-38;RPB=0.982665;SGB=45.9712;VDB=0.663711;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.1:32216903 chr01:032216903 0 W/32216903-32216903 FN-257 Single Base Substitution T-A INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2196-S.SNP.1:32221477 chr01:032221477 0 W/32221477-32221477 FN2196-S SNP C -> T AC=2;AN=190;BQB=0.668745;DP=3938;DP4=2495,1007,29,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000253936;MQB=1.08039e-23;MQSB=0.00776416;RPB=0.99986;SGB=97.7221;VDB=0.584299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P3S|614|LOC_Os01g55940|protein_coding|CODING|LOC_Os01g55940.1|1|1) FN2196-S.SNP.1:32221478 chr01:032221478 0 W/32221478-32221478 FN2196-S SNP C -> T AC=2;AN=190;BQB=0.529838;DP=3950;DP4=2480,1085,27,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000253165;MQB=3.50177e-24;MQSB=0.00092316;RPB=0.982943;SGB=142.717;VDB=0.50838;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P3L|614|LOC_Os01g55940|protein_coding|CODING|LOC_Os01g55940.1|1|1) FN4124-S.SNP.1:32230884 chr01:032230884 0 W/32230884-32230884 FN4124-S SNP G -> A AC=1;AN=182;BQB=0.982715;DP=2590;DP4=1344,1171,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.69833e-11;MQSB=0.779155;RPB=0.673309;SGB=28.1658;VDB=0.782735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.1:32232025 chr01:032232025 0 W/32232025-32232025 FN1133-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN3697-S.SNP.1:32233218 chr01:032233218 0 W/32233218-32233218 FN3697-S SNP T -> C AC=1;AN=190;BQB=0.896633;DP=2876;DP4=1522,1276,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.60584e-10;MQSB=0.780407;RPB=0.874313;SGB=62.7569;VDB=0.788874;EFF=UTR_3_PRIME(MODIFIER||113||239|LOC_Os01g55974|protein_coding|CODING|LOC_Os01g55974.2|10|1),UTR_3_PRIME(MODIFIER||185||248|LOC_Os01g55974|protein_coding|CODING|LOC_Os01g55974.1|9|1),UTR_3_PRIME(MODIFIER||1310||156|LOC_Os01g55974|protein_coding|CODING|LOC_Os01g55974.3|3|1) FN2330.SNP.1:32238577 chr01:032238577 0 W/32238577-32238577 FN2330 SNP C -> T AC=1;AN=192;BQB=0.221742;DP=4746;DP4=2111,2269,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.00657e-12;MQSB=0.903531;RPB=0.899049;SGB=-70.2434;VDB=0.814424;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S87|248|LOC_Os01g55974|protein_coding|CODING|LOC_Os01g55974.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S87|239|LOC_Os01g55974|protein_coding|CODING|LOC_Os01g55974.2|2|1) FN1636-S.SNP.1:32239752 chr01:032239752 0 W/32239752-32239752 FN1636-S Single Base Substitution C-G INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2470.SNP.1:32249409 chr01:032249409 0 W/32249409-32249409 FN2470 SNP A -> C AC=1;AN=200;BQB=0.999945;DP=4776;DP4=2056,2435,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89582e-13;MQSB=0.947034;RPB=0.662177;SGB=45.1159;VDB=0.150549;EFF=INTRON(MODIFIER||||1146|LOC_Os01g56000|protein_coding|CODING|LOC_Os01g56000.1|6|1) FN-68.SNP.1:32256052 chr01:032256052 0 W/32256052-32256052 FN-68 Single Base Substitution C-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3522-S.SNP.1:32257791 chr01:032257791 0 W/32257791-32257791 FN3522-S SNP A -> G AC=1;AN=188;BQB=0.731884;DP=2807;DP4=1243,1303,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.29765e-07;MQSB=0.485653;RPB=0.570169;SGB=28.8977;VDB=0.260267;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.1:32259833 chr01:032259833 0 W/32259833-32259833 FN969-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g56030 EF hand family protein, putative, expressed SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2141-S.SNP.1:32263217 chr01:032263217 0 W/32263217-32263217 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.778492;DP=2314;DP4=1039,1231,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000153088;MQSB=0.992624;RPB=0.907765;SGB=-1.53256;VDB=0.31429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.1:32272811 chr01:032272811 0 W/32272811-32272811 FN2499 SNP A -> C AC=1;AN=200;BQB=0.976894;DP=4445;DP4=1885,2158,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25145e-06;MQSB=0.49393;RPB=0.710058;SGB=58.8698;VDB=0.836531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.1:32278598 chr01:032278598 0 W/32278598-32278598 FN2298 SNP C -> T AC=1;AN=192;BQB=0.967645;DP=5232;DP4=2737,2118,23,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.61974e-16;MQSB=0.854545;RPB=0.899086;SGB=-81.7287;VDB=0.831665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.1:32282697 chr01:032282697 0 W/32282697-32282697 FN2711-S SNP A -> G AC=1;AN=200;BQB=0.35717;DP=5360;DP4=2174,2772,11,17;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.136194;MQB=0.908316;MQSB=0;RPB=0.56296;SGB=123.342;VDB=0.95981;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.1:32283556 chr01:032283556 0 W/32283556-32283556 W138-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3438-S.SNP.1:32288447 chr01:032288447 0 W/32288447-32288447 FN3438-S SNP T -> G AC=1;AN=184;BQB=0.987478;DP=2294;DP4=1067,1147,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.02894e-06;MQSB=0.999922;RPB=0.785129;SGB=32.2261;VDB=0.417808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.1:32290610 chr01:032290610 0 W/32290610-32290610 FN2140-S SNP C -> T AC=2;AN=168;BQB=0.381912;DP=3818;DP4=1883,1817,32,38;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.51802e-32;MQSB=0.987826;RPB=0.185467;SGB=102.22;VDB=0.0768993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.1:32290610 chr01:032290610 0 W/32290610-32290610 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.149827;DP=4845;DP4=2272,2196,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.11463e-10;MQSB=0.646801;RPB=0.0515576;SGB=-37.2167;VDB=0.244876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3718-S.SNP.1:32290610 chr01:032290610 0 W/32290610-32290610 FN3718-S SNP C -> T AC=2;AN=190;BQB=0.982382;DP=2877;DP4=1366,1425,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.6102e-09;MQSB=0.781448;RPB=0.21644;SGB=67.3108;VDB=0.0299062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.1:32292546 chr01:032292546 0 W/32292546-32292546 FN2493 SNP C -> A AC=1;AN=200;BQB=0.764475;DP=5197;DP4=2429,2303,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000192419;MQB=7.37531e-13;MQSB=0.868556;RPB=0.812998;SGB=-9.47921;VDB=0.392993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.1:32294189 chr01:032294189 0 W/32294189-32294189 FN2229-S SNP G -> T AC=1;AN=190;BQB=0.96062;DP=3824;DP4=1594,1755,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000523013;MQB=1.4043e-12;MQSB=0.871937;RPB=0.23843;SGB=82.301;VDB=0.0108682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D74Y|152|LOC_Os01g56090|protein_coding|CODING|LOC_Os01g56090.1|2|1) FN2229-S.SNP.1:32294190 chr01:032294190 0 W/32294190-32294190 FN2229-S SNP A -> T AC=1;AN=190;BQB=0.960776;DP=3818;DP4=1369,1665,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000261917;MQB=1.74028e-12;MQSB=0.50141;RPB=0.230528;SGB=-7.12933;VDB=0.00803813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D74V|152|LOC_Os01g56090|protein_coding|CODING|LOC_Os01g56090.1|2|1) FN2340.SNP.1:32299283 chr01:032299283 0 W/32299283-32299283 FN2340 SNP C -> G AC=1;AN=192;BQB=0.997212;DP=4677;DP4=2031,2134,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.88669e-05;MQSB=0.667038;RPB=0.999367;SGB=10.9636;VDB=0.4228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A100G|397|LOC_Os01g56100|protein_coding|CODING|LOC_Os01g56100.1|1|1) FN_798-4-2.SNP.1:32301212 chr01:032301212 0 W/32301212-32301212 FN_798-4-2 Single Base Substitution A-G Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN2678-S.SNP.1:32302099 chr01:032302099 0 W/32302099-32302099 FN2678-S SNP A -> C AC=2;AN=200;BQB=0.675305;DP=4065;DP4=1981,1663,12,11;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=3.53919e-08;MQSB=6.26104e-11;RPB=0.0898822;SGB=45.1159;VDB=0.140868;EFF=INTRON(MODIFIER||||397|LOC_Os01g56100|protein_coding|CODING|LOC_Os01g56100.1|2|1) FN2649-S.SNP.1:32310095 chr01:032310095 0 W/32310095-32310095 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.998204;DP=4686;DP4=2262,2152,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.85227e-13;MQSB=0.815248;RPB=0.999954;SGB=61.9006;VDB=0.325946;EFF=INTRON(MODIFIER||||342|LOC_Os01g56120|protein_coding|CODING|LOC_Os01g56120.1|2|1) FN453-S.SNP.1:32318571 chr01:032318571 0 W/32318571-32318571 FN453-S Single Base Substitution G-A INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN453-S.SNP.1:32318572 chr01:032318572 0 W/32318572-32318572 FN453-S Single Base Substitution C-A INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3366-S.SNP.1:32321050 chr01:032321050 0 W/32321050-32321050 FN3366-S SNP C -> T AC=2;AN=184;BQB=0.974938;DP=2315;DP4=879,1363,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.69851e-15;MQSB=0.998812;RPB=0.87767;SGB=81.5311;VDB=0.603219;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E292K|690|LOC_Os01g56130|protein_coding|CODING|LOC_Os01g56130.1|2|1) FN2662-S.SNP.1:32323098 chr01:032323098 0 W/32323098-32323098 FN2662-S SNP C -> T AC=2;AN=200;BQB=0.705819;DP=4274;DP4=2103,1936,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.8561e-26;MQSB=0.997651;RPB=0.481791;SGB=152.03;VDB=0.784036;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.1:32331993 chr01:032331993 0 W/32331993-32331993 FN1750-S SNP A -> G AC=2;AN=188;BQB=0.998215;DP=3671;DP4=1613,2007,12,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.21004e-19;MQSB=0.99958;RPB=0.988296;SGB=79.4854;VDB=0.50532;EFF=INTRON(MODIFIER||||987|LOC_Os01g56140|protein_coding|CODING|LOC_Os01g56140.1|1|1) FN4230-S.SNP.1:32334842 chr01:032334842 0 W/32334842-32334842 FN4230-S SNP C -> G AC=1;AN=170;BQB=0.978809;DP=2664;DP4=1444,1161,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.08502e-08;MQSB=0.982091;RPB=0.40109;SGB=47.8722;VDB=0.223642;EFF=UTR_3_PRIME(MODIFIER||91||517|LOC_Os01g56150|protein_coding|CODING|LOC_Os01g56150.1|10|1) FN1086-S.SNP.1:32335254 chr01:032335254 0 W/32335254-32335254 FN1086-S Single Base Substitution T-C INTRON HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1568-S.SNP.1:32335278 chr01:032335278 0 W/32335278-32335278 FN1568-S Single Base Substitution G-A INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN504-S.SNP.1:32341466 chr01:032341466 0 W/32341466-32341466 FN504-S Single Base Substitution C-G INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2591-S.SNP.1:32345824 chr01:032345824 0 W/32345824-32345824 FN2591-S SNP G -> A AC=1;AN=198;BQB=0.434951;DP=4157;DP4=2201,1705,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.51645e-05;MQSB=0.423002;RPB=0.842499;SGB=40.3588;VDB=0.439805;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.1:32347661 chr01:032347661 0 W/32347661-32347661 W385-6-8-4 Single Base Substitution C-T INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. W385-6-8-4.SNP.1:32347681 chr01:032347681 0 W/32347681-32347681 W385-6-8-4 Single Base Substitution C-G INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2192-S.SNP.1:32349438 chr01:032349438 0 W/32349438-32349438 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.99459;DP=4671;DP4=1908,2448,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.34607e-07;MQSB=0.123577;RPB=0.980445;SGB=18.552;VDB=0.751396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P272L|422|LOC_Os01g56180|protein_coding|CODING|LOC_Os01g56180.1|3|1) FN2436.SNP.1:32362351 chr01:032362351 0 W/32362351-32362351 FN2436 SNP T -> G AC=1;AN=200;BQB=0.922777;DP=4997;DP4=2591,2169,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39308e-14;MQSB=0.957096;RPB=0.836616;SGB=109.527;VDB=0.798127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.1:32363817 chr01:032363817 0 W/32363817-32363817 FN2667-S SNP A -> T AC=1;AN=200;BQB=0.846956;DP=5284;DP4=2628,2409,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.99414e-16;MQSB=0.930643;RPB=0.337564;SGB=90.7419;VDB=0.562062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.1:32363942 chr01:032363942 0 W/32363942-32363942 FN2595-S SNP C -> T AC=1;AN=198;BQB=0.258102;DP=3995;DP4=2193,1450,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51722e-06;MQSB=0.856339;RPB=0.934907;SGB=-0.221308;VDB=0.983005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.1:32365642 chr01:032365642 0 W/32365642-32365642 FN3978-S SNP G -> A AC=1;AN=168;BQB=0.974944;DP=2494;DP4=1134,1270,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.59792e-08;MQSB=0.999986;RPB=0.825605;SGB=22.1847;VDB=0.103636;EFF=INTERGENIC(MODIFIER||||||||||1) FN987-S.SNP.1:32367118 chr01:032367118 0 W/32367118-32367118 FN987-S Single Base Substitution A-T INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2124-S.SNP.1:32373485 chr01:032373485 0 W/32373485-32373485 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.594825;DP=1495;DP4=912,557,9,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00217652;MQSB=0.993374;RPB=0.438023;SGB=10.0307;VDB=0.487917;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.1:32378141 chr01:032378141 0 W/32378141-32378141 FN597-S Single Base Substitution G-T INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN4066-S.SNP.1:32381389 chr01:032381389 0 W/32381389-32381389 FN4066-S SNP G -> A AC=1;AN=168;BQB=0.746877;DP=2753;DP4=1277,1346,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.1028e-08;MQSB=0.987896;RPB=0.78711;SGB=24.6155;VDB=0.981409;EFF=UTR_3_PRIME(MODIFIER||183||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.1|9|1),UTR_3_PRIME(MODIFIER||183||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.2|9|1),UTR_3_PRIME(MODIFIER||183||255|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.3|8|1),UTR_3_PRIME(MODIFIER||183||198|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.5|9|1),UTR_3_PRIME(MODIFIER||352||247|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.4|8|1) FN2094-S.SNP.1:32381998 chr01:032381998 0 W/32381998-32381998 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.0377667;DP=3958;DP4=1921,2007,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.20508e-06;MQSB=0.965932;RPB=0.210028;SGB=-82.6471;VDB=0.106464;EFF=INTRON(MODIFIER||||255|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.3|7|1),INTRON(MODIFIER||||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.1|7|1),INTRON(MODIFIER||||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.2|7|1),INTRON(MODIFIER||||247|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.4|7|1),INTRON(MODIFIER||||198|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.5|7|1) FN2390.SNP.1:32383153 chr01:032383153 0 W/32383153-32383153 FN2390 SNP A -> G AC=2;AN=200;BQB=0.944375;DP=5078;DP4=2207,2578,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.1733e-27;MQSB=0.995361;RPB=0.683781;SGB=152.03;VDB=0.57258;EFF=INTRON(MODIFIER||||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.1|2|1),INTRON(MODIFIER||||275|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.2|2|1),INTRON(MODIFIER||||255|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.3|2|1),INTRON(MODIFIER||||247|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.4|2|1),INTRON(MODIFIER||||198|LOC_Os01g56230|protein_coding|CODING|LOC_Os01g56230.5|2|1) FN2462.SNP.1:32395790 chr01:032395790 0 W/32395790-32395790 FN2462 SNP G -> A AC=1;AN=200;BQB=0.869397;DP=4126;DP4=2114,1793,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82742e-06;MQSB=0.830331;RPB=0.488947;SGB=49.6594;VDB=0.431004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G579D|647|LOC_Os01g56250|protein_coding|CODING|LOC_Os01g56250.1|5|1) FN4063-S.SNP.1:32402583 chr01:032402583 0 W/32402583-32402583 FN4063-S SNP G -> T AC=2;AN=168;BQB=0.998977;DP=2811;DP4=1148,1541,13,13;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00177873;MQB=8.53054e-08;MQSB=0.726095;RPB=0.104584;SGB=109.773;VDB=0.0541285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.1:32405200 chr01:032405200 0 W/32405200-32405200 FN1240-S Single Base Substitution T-C INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3673-S.SNP.1:32405606 chr01:032405606 0 W/32405606-32405606 FN3673-S SNP G -> A AC=2;AN=190;BQB=0.627446;DP=1543;DP4=767,690,9,3;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00324044;MQB=0.123619;MQSB=0.737027;RPB=0.222163;SGB=49.0954;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.1:32406284 chr01:032406284 0 W/32406284-32406284 FN1099-S Single Base Substitution C-T INTERGENIC HOMO SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3597-S.SNP.1:32406804 chr01:032406804 0 W/32406804-32406804 FN3597-S SNP G -> A AC=2;AN=188;BQB=0.82242;DP=3981;DP4=1524,2320,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000251193;MQB=1.14102e-19;MQSB=0.999996;RPB=0.34649;SGB=139.845;VDB=0.645014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.1:32406805 chr01:032406805 0 W/32406805-32406805 FN3597-S SNP C -> G AC=2;AN=188;BQB=0.762861;DP=3971;DP4=1525,2256,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000251826;MQB=7.65487e-22;MQSB=0.972292;RPB=0.262812;SGB=76.9421;VDB=0.593092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.1:32411948 chr01:032411948 0 W/32411948-32411948 FN2493 SNP A -> G AC=1;AN=200;BQB=0.724684;DP=8839;DP4=4502,3949,21,18;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.284421;MQB=0.999762;MQSB=3.78351e-44;RPB=0.950323;SGB=86.7987;VDB=0.17683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.2|5|1) FN3472-S.SNP.1:32411948 chr01:032411948 0 W/32411948-32411948 FN3472-S SNP A -> G AC=1;AN=184;BQB=0.979548;DP=5070;DP4=2656,2281,14,15;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.178698;MQB=0.0728873;MQSB=0;RPB=0.145333;SGB=125.613;VDB=0.0878469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.2|5|1) FN3854-S.SNP.1:32411948 chr01:032411948 0 W/32411948-32411948 FN3854-S SNP A -> G AC=1;AN=158;BQB=0.999034;DP=4731;DP4=2435,2134,15,20;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.199112;MQB=0.0206527;MQSB=0;RPB=0.816212;SGB=29.4751;VDB=0.0619545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.2|5|1) FN4082-S.SNP.1:32411948 chr01:032411948 0 W/32411948-32411948 FN4082-S SNP A -> G AC=1;AN=182;BQB=0.876106;DP=5439;DP4=2958,2336,19,25;HOB=6.03792e-05;ICB=0.000121422;MQ=24;MQ0F=0.217687;MQB=0.0928215;MQSB=0;RPB=0.700187;SGB=192.97;VDB=0.146359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I158V|397|LOC_Os01g56270|protein_coding|CODING|LOC_Os01g56270.2|5|1) FN522-S.SNP.1:32411948 chr01:032411948 0 W/32411948-32411948 FN522-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g56270 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1188-S.SNP.1:32429782 chr01:032429782 0 W/32429782-32429782 FN1188-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN-396.SNP.1:32431547 chr01:032431547 0 W/32431547-32431547 FN-396 Single Base Substitution G-T INTERGENIC HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN748-S.SNP.1:32432081 chr01:032432081 0 W/32432081-32432081 FN748-S Single Base Substitution A-G INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1619-S.SNP.1:32439563 chr01:032439563 0 W/32439563-32439563 FN1619-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1448-S.SNP.1:32446477 chr01:032446477 0 W/32446477-32446477 FN1448-S Single Base Substitution A-G INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN_N1-119-1.SNP.1:32447917 chr01:032447917 0 W/32447917-32447917 FN_N1-119-1 Single Base Substitution T-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2446.SNP.1:32448462 chr01:032448462 0 W/32448462-32448462 FN2446 SNP G -> C AC=1;AN=200;BQB=0.899187;DP=4476;DP4=2321,1929,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19918e-08;MQSB=0.822651;RPB=0.203137;SGB=40.2696;VDB=0.220083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.1:32460953 chr01:032460953 0 W/32460953-32460953 FN2789-S SNP C -> T AC=2;AN=198;BQB=0.223864;DP=3913;DP4=1735,1832,28,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.38422e-25;MQSB=0.907355;RPB=0.995366;SGB=6.99342;VDB=0.938829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.1:32461298 chr01:032461298 0 W/32461298-32461298 FN2554-S SNP A -> T AC=1;AN=198;BQB=0.932881;DP=3837;DP4=1713,1768,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00026062;MQB=7.16085e-08;MQSB=0.63144;RPB=0.921063;SGB=26.7492;VDB=0.776679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1726-S.SNP.1:32477719 chr01:032477719 0 W/32477719-32477719 FN1726-S SNP T -> G AC=1;AN=188;BQB=0.172095;DP=3496;DP4=1494,1966,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7076e-11;MQSB=0.94961;RPB=0.472671;SGB=16.3413;VDB=0.224938;EFF=INTRON(MODIFIER||||518|LOC_Os01g56360|protein_coding|CODING|LOC_Os01g56360.1|2|1) FN2682-S.SNP.1:32479365 chr01:032479365 0 W/32479365-32479365 FN2682-S SNP A -> G AC=1;AN=200;BQB=0.98938;DP=4987;DP4=2577,2113,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74731e-07;MQSB=0.861372;RPB=0.97926;SGB=29.4541;VDB=0.658291;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.1:32480176 chr01:032480176 0 W/32480176-32480176 FN734-S Single Base Substitution T-C INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3819-S.SNP.1:32480362 chr01:032480362 0 W/32480362-32480362 FN3819-S SNP T -> C AC=1;AN=190;BQB=0.894259;DP=2816;DP4=1637,1113,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.12289e-05;MQSB=0.791277;RPB=0.389142;SGB=21.8853;VDB=0.364077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.1:32481097 chr01:032481097 0 W/32481097-32481097 FN1188-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3758-S.SNP.1:32488012 chr01:032488012 0 W/32488012-32488012 FN3758-S SNP C -> T AC=2;AN=190;BQB=0.746995;DP=2089;DP4=913,1048,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.00668e-11;MQSB=0.939243;RPB=0.955438;SGB=85.5263;VDB=0.759018;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D389N|629|LOC_Os01g56370|protein_coding|CODING|LOC_Os01g56370.1|3|1) FN2312.SNP.1:32492047 chr01:032492047 0 W/32492047-32492047 FN2312 SNP G -> A AC=1;AN=192;BQB=0.999991;DP=5914;DP4=2734,2790,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.91573e-08;MQSB=0.977776;RPB=0.328787;SGB=39.78;VDB=0.504048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.1:32511141 chr01:032511141 0 W/32511141-32511141 FN-238 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g56390 OsFBX26 - F-box domain containing protein, expressed SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-61.SNP.1:32517022 chr01:032517022 0 W/32517022-32517022 FN-61 Single Base Substitution C-T INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2293.SNP.1:32521712 chr01:032521712 0 W/32521712-32521712 FN2293 SNP G -> A AC=1;AN=192;BQB=0.670604;DP=4634;DP4=1828,2532,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0056107;MQB=9.90275e-05;MQSB=0.0094825;RPB=0.853517;SGB=8.91915;VDB=0.0951013;EFF=INTRON(MODIFIER||||493|LOC_Os01g56410|protein_coding|CODING|LOC_Os01g56410.1|4|1) FN2347.SNP.1:32523881 chr01:032523881 0 W/32523881-32523881 FN2347 SNP G -> A AC=1;AN=192;BQB=0.514855;DP=4711;DP4=1990,2464,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000212269;MQB=1.99441e-17;MQSB=0.902632;RPB=0.654085;SGB=64.8148;VDB=0.767393;EFF=UTR_3_PRIME(MODIFIER||34||161|LOC_Os01g56420|protein_coding|CODING|LOC_Os01g56420.1|1|1) FN1389-S.SNP.1:32526290 chr01:032526290 0 W/32526290-32526290 FN1389-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1525-S.SNP.1:32529089 chr01:032529089 0 W/32529089-32529089 FN1525-S Single Base Substitution T-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN-283.SNP.1:32529276 chr01:032529276 0 W/32529276-32529276 FN-283 Single Base Substitution T-C INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN_788-1-1.SNP.1:32540806 chr01:032540806 0 W/32540806-32540806 FN_788-1-1 Single Base Substitution A-T HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. W416-6-1.SNP.1:32558584 chr01:032558584 0 W/32558584-32558584 W416-6-1 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN485-S.SNP.1:32562525 chr01:032562525 0 W/32562525-32562525 FN485-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3550-S.SNP.1:32562734 chr01:032562734 0 W/32562734-32562734 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.972787;DP=2444;DP4=1234,1150,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.37158e-06;MQSB=0.709781;RPB=0.0939617;SGB=35.3493;VDB=0.110731;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P502|1110|LOC_Os01g56490|protein_coding|CODING|LOC_Os01g56490.1|13|1) FN3484-S.SNP.1:32564295 chr01:032564295 0 W/32564295-32564295 FN3484-S SNP G -> C AC=1;AN=184;BQB=0.703686;DP=2574;DP4=1382,1117,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.57044e-05;MQSB=0.982564;RPB=0.937655;SGB=32.2261;VDB=0.272591;EFF=INTRON(MODIFIER||||1110|LOC_Os01g56490|protein_coding|CODING|LOC_Os01g56490.1|10|1) FN4096-S.SNP.1:32564444 chr01:032564444 0 W/32564444-32564444 FN4096-S SNP G -> C AC=1;AN=182;BQB=0.922446;DP=2928;DP4=1375,1475,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000207159;MQSB=0.949123;RPB=0.998286;SGB=18.0739;VDB=0.188618;EFF=INTRON(MODIFIER||||1110|LOC_Os01g56490|protein_coding|CODING|LOC_Os01g56490.1|10|1) FN1512-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN1512-S Single Base Substitution A-G INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1606-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN1606-S Single Base Substitution A-G INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2169-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN2169-S SNP A -> G AC=1;AN=168;BQB=0.0407119;DP=2845;DP4=1273,1540,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.59544e-05;MQSB=0.112428;RPB=0.879965;SGB=-55.5147;VDB=0.257186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN2387 SNP A -> G AC=2;AN=192;BQB=0.36341;DP=5131;DP4=2317,2423,31,60;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.8026e-45;MQSB=0.653725;RPB=0.890031;SGB=304.13;VDB=0.482669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN2437 SNP A -> G AC=2;AN=200;BQB=0.779651;DP=4604;DP4=2066,2173,27,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.70264e-32;MQSB=0.260956;RPB=0.977494;SGB=216.923;VDB=0.229768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN2621-S SNP A -> G AC=1;AN=200;BQB=0.994546;DP=5079;DP4=2389,2469,19,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21489e-17;MQSB=0.209971;RPB=0.978221;SGB=108.768;VDB=0.859036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN3282-S SNP A -> G AC=2;AN=184;BQB=0.923243;DP=2865;DP4=1494,1272,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.73128e-07;MQSB=0.162092;RPB=0.998096;SGB=62.3078;VDB=0.572958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN3773-S SNP A -> G AC=1;AN=190;BQB=0.914613;DP=2520;DP4=1330,1087,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.09866e-08;MQSB=0.36699;RPB=0.943223;SGB=62.7569;VDB=0.0822528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN3967-S SNP A -> G AC=2;AN=182;BQB=0.971754;DP=2621;DP4=1360,1144,14,28;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.81155e-20;MQSB=0.509338;RPB=0.493756;SGB=178.498;VDB=0.953351;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 FN3979-S SNP A -> G AC=2;AN=168;BQB=0.988581;DP=2397;DP4=1228,1035,15,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.8066e-16;MQSB=0.313007;RPB=0.611673;SGB=93.0718;VDB=0.226597;EFF=INTERGENIC(MODIFIER||||||||||1) W475-4-2.SNP.1:32570228 chr01:032570228 0 W/32570228-32570228 W475-4-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3629-S.SNP.1:32572914 chr01:032572914 0 W/32572914-32572914 FN3629-S SNP C -> G AC=1;AN=190;BQB=0.75577;DP=2935;DP4=1298,1509,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51291e-05;MQSB=0.997003;RPB=0.99989;SGB=44.5415;VDB=0.999661;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.1:32576043 chr01:032576043 0 W/32576043-32576043 FN_N2-29a-1 Single Base Substitution C-T HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN_1017-1.SNP.1:32586975 chr01:032586975 0 W/32586975-32586975 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2353.SNP.1:32590042 chr01:032590042 0 W/32590042-32590042 FN2353 SNP C -> A AC=2;AN=192;BQB=0.999727;DP=5318;DP4=2495,2552,19,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.75556e-17;MQSB=0.926463;RPB=0.861722;SGB=96.8096;VDB=0.606283;EFF=INTRON(MODIFIER||||441|LOC_Os01g56520|protein_coding|CODING|LOC_Os01g56520.1|1|1),INTRON(MODIFIER||||438|LOC_Os01g56520|protein_coding|CODING|LOC_Os01g56520.2|1|1) FN2756-S.SNP.1:32593026 chr01:032593026 0 W/32593026-32593026 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.843558;DP=4398;DP4=2443,1674,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.45755e-11;MQSB=0.549016;RPB=0.983514;SGB=77.2904;VDB=0.417075;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F236|245|LOC_Os01g56530|protein_coding|CODING|LOC_Os01g56530.1|2|1) FN2252-S.SNP.1:32594990 chr01:032594990 0 W/32594990-32594990 FN2252-S SNP A -> C AC=1;AN=190;BQB=0.947478;DP=4739;DP4=2259,2134,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.64031e-10;MQSB=0.79183;RPB=0.253849;SGB=46.7622;VDB=0.0455471;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgG|R255|343|LOC_Os01g56540|protein_coding|CODING|LOC_Os01g56540.1|3|1) FN2546-S.SNP.1:32595864 chr01:032595864 0 W/32595864-32595864 FN2546-S SNP C -> T AC=2;AN=198;BQB=0.927967;DP=4234;DP4=1957,2065,10,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.01105e-13;MQSB=0.999888;RPB=0.750308;SGB=109.285;VDB=0.542706;EFF=INTRON(MODIFIER||||343|LOC_Os01g56540|protein_coding|CODING|LOC_Os01g56540.1|1|1) FN3357-S.SNP.1:32597701 chr01:032597701 0 W/32597701-32597701 FN3357-S SNP T -> A AC=1;AN=184;BQB=0.99916;DP=2767;DP4=1268,1389,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.25904e-07;MQSB=0.0441168;RPB=0.398215;SGB=20.7533;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.1:32602655 chr01:032602655 0 W/32602655-32602655 FN2422 SNP C -> T AC=2;AN=200;BQB=0.368141;DP=3572;DP4=2260,1054,26,12;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00531915;MQB=0.380882;MQSB=2.61841e-07;RPB=0.495469;SGB=84.1935;VDB=0.35569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.1:32602701 chr01:032602701 0 W/32602701-32602701 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.817038;DP=2684;DP4=1709,891,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00670641;MQB=0.831098;MQSB=3.88171e-07;RPB=0.652282;SGB=48.7425;VDB=0.645013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.1:32603517 chr01:032603517 0 W/32603517-32603517 FN3339-S SNP C -> G AC=2;AN=184;BQB=0.908627;DP=3058;DP4=1213,1690,8,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11485e-11;MQSB=0.518544;RPB=0.237706;SGB=78.0093;VDB=0.754718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.1:32606069 chr01:032606069 0 W/32606069-32606069 FN2370 SNP G -> A AC=1;AN=192;BQB=0.858781;DP=4934;DP4=2367,2243,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000202675;MQB=5.50727e-10;MQSB=0.569964;RPB=0.57991;SGB=36.607;VDB=0.0314046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.1:32619461 chr01:032619461 0 W/32619461-32619461 FN1120-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g56580 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN4234-S.SNP.1:32646318 chr01:032646318 0 W/32646318-32646318 FN4234-S SNP T -> A AC=2;AN=170;BQB=0.994756;DP=2715;DP4=1315,1313,12,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.11534e-14;MQSB=0.945182;RPB=0.626018;SGB=92.2986;VDB=0.398936;EFF=INTRON(MODIFIER||||1496|LOC_Os01g56590|protein_coding|CODING|LOC_Os01g56590.1|41|1) FN2180-S.SNP.1:32652242 chr01:032652242 0 W/32652242-32652242 FN2180-S SNP A -> G AC=1;AN=190;BQB=0.738836;DP=4305;DP4=1698,2229,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000232288;MQB=1.58198e-08;MQSB=0.639615;RPB=0.98426;SGB=39.6545;VDB=0.441075;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.1:32667251 chr01:032667251 0 W/32667251-32667251 FN518-S Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2698-S.SNP.1:32687294 chr01:032687294 0 W/32687294-32687294 FN2698-S SNP C -> T AC=2;AN=200;BQB=0.996096;DP=4942;DP4=2328,2322,13,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05279e-18;MQSB=0.949298;RPB=0.967323;SGB=132.552;VDB=0.148751;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.1:32691027 chr01:032691027 0 W/32691027-32691027 FN865-S Single Base Substitution G-A INTERGENIC HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2771-S.SNP.1:32691789 chr01:032691789 0 W/32691789-32691789 FN2771-S SNP C -> A AC=1;AN=198;BQB=0.771866;DP=2325;DP4=1740,373,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.98266e-05;MQSB=0.226174;RPB=0.806625;SGB=35.7638;VDB=0.218349;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.1:32696275 chr01:032696275 0 W/32696275-32696275 FN788-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g56660 expressed protein SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1647-S.SNP.1:32702689 chr01:032702689 0 W/32702689-32702689 FN1647-S Single Base Substitution G-A INTRON HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2142-S.SNP.1:32712933 chr01:032712933 0 W/32712933-32712933 FN2142-S SNP T -> A AC=1;AN=168;BQB=0.0277434;DP=2831;DP4=1703,1094,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29939e-05;MQSB=0.936769;RPB=0.967578;SGB=-37.7974;VDB=0.570312;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.1:32713049 chr01:032713049 0 W/32713049-32713049 FN1219-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1431-S.SNP.1:32717659 chr01:032717659 0 W/32717659-32717659 FN1431-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-227.SNP.1:32718221 chr01:032718221 0 W/32718221-32718221 FN-227 Single Base Substitution C-T INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2373.SNP.1:32718221 chr01:032718221 0 W/32718221-32718221 FN2373 SNP C -> T AC=2;AN=192;BQB=0.78858;DP=4639;DP4=2410,1930,27,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.91615e-26;MQSB=0.765936;RPB=0.882585;SGB=116.102;VDB=0.0232832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.1:32718221 chr01:032718221 0 W/32718221-32718221 FN2446 SNP C -> T AC=2;AN=200;BQB=0.424812;DP=4266;DP4=2203,1788,24,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.8727e-18;MQSB=0.770233;RPB=0.915694;SGB=94.6142;VDB=0.624968;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.1:32718221 chr01:032718221 0 W/32718221-32718221 FN499-S Single Base Substitution C-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN898-S.SNP.1:32718221 chr01:032718221 0 W/32718221-32718221 FN898-S Single Base Substitution C-T INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2779-S.SNP.1:32724523 chr01:032724523 0 W/32724523-32724523 FN2779-S SNP T -> G AC=1;AN=198;BQB=0.773647;DP=4091;DP4=2012,1843,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.61056e-13;MQSB=0.794014;RPB=0.65228;SGB=17.325;VDB=0.657043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.1:32726310 chr01:032726310 0 W/32726310-32726310 FN3531-S SNP A -> C AC=1;AN=188;BQB=0.738044;DP=2163;DP4=1129,946,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.94701e-06;MQSB=0.899452;RPB=0.592333;SGB=21.8113;VDB=0.611431;EFF=UTR_3_PRIME(MODIFIER||336||233|LOC_Os01g56720|protein_coding|CODING|LOC_Os01g56720.1|2|1) FN681-S.SNP.1:32726310 chr01:032726310 0 W/32726310-32726310 FN681-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2592-S.SNP.1:32728046 chr01:032728046 0 W/32728046-32728046 FN2592-S SNP T -> C AC=1;AN=198;BQB=0.956709;DP=4215;DP4=1806,2235,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.9979e-08;MQSB=0.463627;RPB=0.85276;SGB=18.9639;VDB=0.537189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.1:32729826 chr01:032729826 0 W/32729826-32729826 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.783354;DP=4900;DP4=2442,2138,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99422e-10;MQSB=0.921659;RPB=0.0635502;SGB=77.2904;VDB=0.794807;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.1:32736183 chr01:032736183 0 W/32736183-32736183 FN2322 SNP T -> A AC=2;AN=192;BQB=0.895273;DP=5078;DP4=2497,2221,14,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.28653e-20;MQSB=0.747265;RPB=0.635409;SGB=121.76;VDB=0.550294;EFF=INTRON(MODIFIER||||279|LOC_Os01g56730|protein_coding|CODING|LOC_Os01g56730.1|1|1) FN-246.SNP.1:32743063 chr01:032743063 0 W/32743063-32743063 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2302.SNP.1:32743063 chr01:032743063 0 W/32743063-32743063 FN2302 SNP C -> T AC=2;AN=192;BQB=0.0883471;DP=4327;DP4=2076,1745,28,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000231107;MQB=3.19713e-19;MQSB=0.903343;RPB=0.37813;SGB=55.8496;VDB=0.699821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.1:32743063 chr01:032743063 0 W/32743063-32743063 FN2708-S SNP C -> T AC=1;AN=200;BQB=1.43127e-05;DP=4477;DP4=2174,1876,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.73806e-06;MQSB=0.588206;RPB=0.0742949;SGB=58.2954;VDB=0.95438;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.1:32747160 chr01:032747160 0 W/32747160-32747160 FN-375 Single Base Substitution T-C INTERGENIC HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-411.SNP.1:32747160 chr01:032747160 0 W/32747160-32747160 FN-411 Single Base Substitution T-C INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN411-S.SNP.1:32747160 chr01:032747160 0 W/32747160-32747160 FN411-S Single Base Substitution T-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3424-S.SNP.1:32747907 chr01:032747907 0 W/32747907-32747907 FN3424-S SNP A -> G AC=1;AN=184;BQB=0.822361;DP=2915;DP4=1546,1276,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34668e-05;MQSB=0.999789;RPB=0.94967;SGB=48.7425;VDB=0.804268;EFF=UTR_3_PRIME(MODIFIER||161||509|LOC_Os01g56764|protein_coding|CODING|LOC_Os01g56764.1|8|1) FN2395.SNP.1:32750553 chr01:032750553 0 W/32750553-32750553 FN2395 SNP G -> A AC=1;AN=200;BQB=0.166285;DP=5132;DP4=2254,2594,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.39244e-10;MQSB=0.994378;RPB=0.779683;SGB=29.4849;VDB=0.77318;EFF=INTRON(MODIFIER||||509|LOC_Os01g56764|protein_coding|CODING|LOC_Os01g56764.1|1|1) FN-228.SNP.1:32755922 chr01:032755922 0 W/32755922-32755922 FN-228 Single Base Substitution A-G INTRON HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN4096-S.SNP.1:32757666 chr01:032757666 0 W/32757666-32757666 FN4096-S SNP C -> T AC=1;AN=182;BQB=0.464119;DP=2918;DP4=1469,1370,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000440115;MQSB=0.906797;RPB=0.388132;SGB=44.1115;VDB=0.555357;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P21|509|LOC_Os01g56764|protein_coding|CODING|LOC_Os01g56764.1|1|1) FN4234-S.SNP.1:32772105 chr01:032772105 0 W/32772105-32772105 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.806897;DP=2842;DP4=1276,1456,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.46019e-06;MQSB=0.990549;RPB=0.947964;SGB=52.3148;VDB=0.375586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E612G|896|LOC_Os01g56790|protein_coding|CODING|LOC_Os01g56790.1|6|1) FN2285.SNP.1:32780263 chr01:032780263 0 W/32780263-32780263 FN2285 SNP A -> G AC=2;AN=192;BQB=0.929428;DP=5179;DP4=2465,2438,17,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.74528e-17;MQSB=0.995683;RPB=0.887384;SGB=67.3792;VDB=0.291336;EFF=INTRON(MODIFIER||||1277|LOC_Os01g56800|protein_coding|CODING|LOC_Os01g56800.1|7|1),INTRON(MODIFIER||||1252|LOC_Os01g56800|protein_coding|CODING|LOC_Os01g56800.2|6|1),INTRON(MODIFIER||||1249|LOC_Os01g56800|protein_coding|CODING|LOC_Os01g56800.3|6|1) FN1634-S.SNP.1:32783665 chr01:032783665 0 W/32783665-32783665 FN1634-S Single Base Substitution G-A START_GAINED HET LOC_Os01g56800 MATH domain containing protein, expressed SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2702-S.SNP.1:32783779 chr01:032783779 0 W/32783779-32783779 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.342343;DP=4379;DP4=2279,1604,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36661e-05;MQSB=0.885853;RPB=0.536044;SGB=16.4591;VDB=0.470998;EFF=INTRON(MODIFIER||||1277|LOC_Os01g56800|protein_coding|CODING|LOC_Os01g56800.1|2|1) FN1420-S.SNP.1:32784143 chr01:032784143 0 W/32784143-32784143 FN1420-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1420-S.SNP.1:32784144 chr01:032784144 0 W/32784144-32784144 FN1420-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1320-S.SNP.1:32784414 chr01:032784414 0 W/32784414-32784414 FN1320-S Single Base Substitution A-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN_815-4-1.SNP.1:32784910 chr01:032784910 0 W/32784910-32784910 FN_815-4-1 Single Base Substitution C-T HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN919-S.SNP.1:32793329 chr01:032793329 0 W/32793329-32793329 FN919-S Single Base Substitution C-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN691-S.SNP.1:32797313 chr01:032797313 0 W/32797313-32797313 FN691-S Single Base Substitution A-G INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2574-S.SNP.1:32801800 chr01:032801800 0 W/32801800-32801800 FN2574-S SNP A -> T AC=1;AN=198;BQB=0.965857;DP=4502;DP4=2399,1817,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000222124;MQB=9.99365e-08;MQSB=0.949793;RPB=0.858497;SGB=16.3688;VDB=0.743718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.1:32805854 chr01:032805854 0 W/32805854-32805854 FN2584-S SNP G -> A AC=2;AN=198;BQB=0.703631;DP=4226;DP4=1899,2084,20,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.0883e-24;MQSB=0.998452;RPB=0.417628;SGB=144.408;VDB=0.0225045;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.1:32811987 chr01:032811987 0 W/32811987-32811987 FN4128-S SNP T -> C AC=1;AN=182;BQB=0.976495;DP=3613;DP4=1861,1652,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.45171e-06;MQSB=0.997434;RPB=0.985733;SGB=21.5845;VDB=0.942779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.1:32815978 chr01:032815978 0 W/32815978-32815978 FN2486 SNP T -> C AC=1;AN=200;BQB=0.79367;DP=5009;DP4=2364,2273,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199641;MQB=1.16291e-18;MQSB=0.997001;RPB=0.662778;SGB=97.9523;VDB=0.939139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N167S|216|LOC_Os01g56820|protein_coding|CODING|LOC_Os01g56820.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N167S|207|LOC_Os01g56820|protein_coding|CODING|LOC_Os01g56820.2|5|1) FN1559-S.SNP.1:32817984 chr01:032817984 0 W/32817984-32817984 FN1559-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g56820 AGAP000951-PA, putative, expressed SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN735-S.SNP.1:32819120 chr01:032819120 0 W/32819120-32819120 FN735-S Single Base Substitution G-A INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN735-S.SNP.1:32819121 chr01:032819121 0 W/32819121-32819121 FN735-S Single Base Substitution C-A INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN3371-S.SNP.1:32821732 chr01:032821732 0 W/32821732-32821732 FN3371-S SNP C -> T AC=1;AN=184;BQB=0.989483;DP=3472;DP4=1941,1425,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40751e-12;MQSB=0.945162;RPB=0.0188231;SGB=93.9603;VDB=0.0336448;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.1:32822110 chr01:032822110 0 W/32822110-32822110 FN865-S Single Base Substitution C-T INTERGENIC HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN679-S.SNP.1:32824779 chr01:032824779 0 W/32824779-32824779 FN679-S Single Base Substitution A-G INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3939-S.SNP.1:32826509 chr01:032826509 0 W/32826509-32826509 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.953707;DP=2282;DP4=1022,1172,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00175285;MQB=0.0188223;MQSB=0.980314;RPB=0.690807;SGB=40.8124;VDB=0.956819;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.1:32836306 chr01:032836306 0 W/32836306-32836306 FN3472-S SNP G -> A AC=2;AN=184;BQB=0.775623;DP=2841;DP4=1436,1295,18,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.12828e-19;MQSB=0.496805;RPB=0.797975;SGB=106.184;VDB=0.0446728;EFF=UTR_5_PRIME(MODIFIER||713||299|LOC_Os01g56850|protein_coding|CODING|LOC_Os01g56850.1|1|1) FN3810-S.SNP.1:32838562 chr01:032838562 0 W/32838562-32838562 FN3810-S SNP T -> G AC=1;AN=190;BQB=0.614984;DP=2894;DP4=1258,1533,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.32952e-07;MQSB=0.983685;RPB=0.692325;SGB=-0.550503;VDB=0.413867;EFF=UTR_3_PRIME(MODIFIER||259||478|LOC_Os01g56860|protein_coding|CODING|LOC_Os01g56860.1|12|1) FN3663-S.SNP.1:32860471 chr01:032860471 0 W/32860471-32860471 FN3663-S SNP C -> T AC=2;AN=190;BQB=0.977847;DP=2846;DP4=1294,1413,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16128e-14;MQSB=0.99797;RPB=0.999201;SGB=108.296;VDB=0.52933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.1:32869017 chr01:032869017 0 W/32869017-32869017 FN1314-S Single Base Substitution C-A INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN506-S.SNP.1:32869017 chr01:032869017 0 W/32869017-32869017 FN506-S Single Base Substitution C-A INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN_949-1.SNP.1:32876084 chr01:032876084 0 W/32876084-32876084 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN_949-1.SNP.1:32876085 chr01:032876085 0 W/32876085-32876085 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN-279.SNP.1:32877970 chr01:032877970 0 W/32877970-32877970 FN-279 Single Base Substitution G-T UTR_3_PRIME HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-279.SNP.1:32877971 chr01:032877971 0 W/32877971-32877971 FN-279 Single Base Substitution C-T UTR_3_PRIME HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2698-S.SNP.1:32881072 chr01:032881072 0 W/32881072-32881072 FN2698-S SNP T -> C AC=2;AN=200;BQB=0.781875;DP=4647;DP4=1978,2442,47,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.61501e-37;MQSB=0.344261;RPB=0.530136;SGB=301.952;VDB=0.82111;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.1:32881113 chr01:032881113 0 W/32881113-32881113 FN_786-4-1 Single Base Substitution C-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN4145-S.SNP.1:32884890 chr01:032884890 0 W/32884890-32884890 FN4145-S SNP C -> A AC=1;AN=170;BQB=0.974986;DP=2538;DP4=1353,1089,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.30476e-06;MQSB=0.958884;RPB=0.4992;SGB=34.5445;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.1:32885325 chr01:032885325 0 W/32885325-32885325 FN2709-S SNP T -> A AC=2;AN=200;BQB=0.00019852;DP=5221;DP4=2493,2481,13,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.3093e-14;MQSB=0.775335;RPB=0.298796;SGB=105.163;VDB=0.864408;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.1:32885503 chr01:032885503 0 W/32885503-32885503 FN525-S Single Base Substitution G-A INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN918-S.SNP.1:32885693 chr01:032885693 0 W/32885693-32885693 FN918-S Single Base Substitution T-G INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN454-S.SNP.1:32885701 chr01:032885701 0 W/32885701-32885701 FN454-S Single Base Substitution G-A INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3473-S.SNP.1:32891708 chr01:032891708 0 W/32891708-32891708 FN3473-S SNP C -> G AC=1;AN=184;BQB=0.92829;DP=2886;DP4=1558,1225,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95448e-05;MQSB=0.996303;RPB=0.790705;SGB=39.699;VDB=0.491369;EFF=INTRON(MODIFIER||||504|LOC_Os01g56930|protein_coding|CODING|LOC_Os01g56930.1|8|1) FN1075-S.SNP.1:32893070 chr01:032893070 0 W/32893070-32893070 FN1075-S Single Base Substitution C-T INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2293.SNP.1:32893120 chr01:032893120 0 W/32893120-32893120 FN2293 SNP A -> C AC=1;AN=192;BQB=0.626598;DP=4054;DP4=1720,1873,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.15431e-07;MQSB=0.891993;RPB=0.933107;SGB=26.3496;VDB=0.352624;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.1:32913977 chr01:032913977 0 W/32913977-32913977 FN552-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g56980 histidine acid phosphatase, putative, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2530-S.SNP.1:32927602 chr01:032927602 0 W/32927602-32927602 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.617243;DP=3972;DP4=1912,1809,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.27147e-15;MQSB=0.897122;RPB=0.615511;SGB=23.7055;VDB=0.102047;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.1:32928809 chr01:032928809 0 W/32928809-32928809 FN564-S Single Base Substitution T-C INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN728-S.SNP.1:32933273 chr01:032933273 0 W/32933273-32933273 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2122-S.SNP.1:32934485 chr01:032934485 0 W/32934485-32934485 FN2122-S SNP C -> G AC=1;AN=168;BQB=0.334645;DP=2943;DP4=1374,1422,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.39923e-06;MQSB=0.998984;RPB=0.827235;SGB=-38.9357;VDB=0.883294;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P33R|67|LOC_Os01g57004|protein_coding|CODING|LOC_Os01g57004.1|2|1) FN3793-S.SNP.1:32938916 chr01:032938916 0 W/32938916-32938916 FN3793-S SNP A -> G AC=1;AN=190;BQB=0.968244;DP=2838;DP4=1461,1210,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.57131e-07;MQSB=0.987987;RPB=0.932755;SGB=39.6545;VDB=0.126489;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.1:32946446 chr01:032946446 0 W/32946446-32946446 FN851-S Single Base Substitution T-G INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3606-S.SNP.1:32949931 chr01:032949931 0 W/32949931-32949931 FN3606-S SNP T -> C AC=1;AN=190;BQB=0.999542;DP=2483;DP4=1127,1261,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33321e-06;MQSB=0.999701;RPB=0.638541;SGB=49.0954;VDB=0.94573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN-348 Single Base Substitution T-A INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-83.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN-83 Single Base Substitution T-A INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1301-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN1301-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1488-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN1488-S Single Base Substitution T-A INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2568-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN2568-S SNP T -> A AC=1;AN=198;BQB=0.340887;DP=4598;DP4=2054,2021,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.60535e-05;MQSB=0.00385088;RPB=0.988027;SGB=32.9588;VDB=0.114178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN3856-S SNP T -> A AC=2;AN=158;BQB=0.420121;DP=2908;DP4=1331,1442,19,12;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.47482e-11;MQSB=0.994737;RPB=0.979627;SGB=94.7235;VDB=0.458511;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN4151-S SNP T -> A AC=2;AN=170;BQB=0.823706;DP=1440;DP4=1115,252,26,0;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.17768e-10;MQSB=2.22146e-06;RPB=0.912029;SGB=71.4658;VDB=0.485021;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.1:32952566 chr01:032952566 0 W/32952566-32952566 FN989-S Single Base Substitution T-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN-163.SNP.1:32960425 chr01:032960425 0 W/32960425-32960425 FN-163 Single Base Substitution A-T INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2200-S.SNP.1:32966687 chr01:032966687 0 W/32966687-32966687 FN2200-S SNP A -> G AC=2;AN=190;BQB=0.845971;DP=4011;DP4=2111,1489,18,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.89388e-18;MQSB=0.463279;RPB=0.614421;SGB=79.845;VDB=0.72602;EFF=INTRON(MODIFIER||||973|LOC_Os01g57073|protein_coding|CODING|LOC_Os01g57073.1|2|1) FN-279.SNP.1:32971142 chr01:032971142 0 W/32971142-32971142 FN-279 Single Base Substitution C-A INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-279.SNP.1:32971143 chr01:032971143 0 W/32971143-32971143 FN-279 Single Base Substitution T-A INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN495-S.SNP.1:32981318 chr01:032981318 0 W/32981318-32981318 FN495-S Single Base Substitution T-C INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3358-S.SNP.1:32983505 chr01:032983505 0 W/32983505-32983505 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.736314;DP=2808;DP4=1404,1297,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.38104e-08;MQSB=0.646163;RPB=0.850892;SGB=39.2697;VDB=0.99437;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.1:32989880 chr01:032989880 0 W/32989880-32989880 FN880-S Single Base Substitution A-G INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN-261.SNP.1:32993293 chr01:032993293 0 W/32993293-32993293 FN-261 Single Base Substitution G-A INTRON HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN1758-S.SNP.1:33006224 chr01:033006224 0 W/33006224-33006224 FN1758-S SNP A -> C AC=1;AN=188;BQB=0.0834261;DP=3627;DP4=1797,1783,21,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.22978e-13;MQSB=0.999264;RPB=0.873578;SGB=-125.748;VDB=0.642721;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccG|P449|1228|LOC_Os01g57110|protein_coding|CODING|LOC_Os01g57110.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccT/ccG|P434|1213|LOC_Os01g57110|protein_coding|CODING|LOC_Os01g57110.2|5|1) FN1647-S.SNP.1:33012532 chr01:033012532 0 W/33012532-33012532 FN1647-S Single Base Substitution C-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN973-S.SNP.1:33013612 chr01:033013612 0 W/33013612-33013612 FN973-S Single Base Substitution A-T INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2112-S.SNP.1:33019790 chr01:033019790 0 W/33019790-33019790 FN2112-S SNP T -> C AC=1;AN=168;BQB=0.895533;DP=2303;DP4=994,1250,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.000395252;MQSB=0.0210591;RPB=0.263357;SGB=-60.2222;VDB=0.519269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I40V|886|LOC_Os01g57120|protein_coding|CODING|LOC_Os01g57120.1|2|1) FN2689-S.SNP.1:33024502 chr01:033024502 0 W/33024502-33024502 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.979505;DP=4907;DP4=2456,2175,6,5;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0173222;MQB=0.329209;MQSB=0.0978411;RPB=0.612417;SGB=13.8539;VDB=0.563265;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.1:33030860 chr01:033030860 0 W/33030860-33030860 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN4111-S.SNP.1:33036573 chr01:033036573 0 W/33036573-33036573 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.663817;DP=2274;DP4=1484,692,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.89621e-06;MQSB=0.843452;RPB=0.513741;SGB=39.1386;VDB=0.44694;EFF=INTRON(MODIFIER||||1057|LOC_Os01g57160|protein_coding|CODING|LOC_Os01g57160.1|2|1) FN1573-S.SNP.1:33036593 chr01:033036593 0 W/33036593-33036593 FN1573-S Single Base Substitution C-T INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1444-S.SNP.1:33039261 chr01:033039261 0 W/33039261-33039261 FN1444-S Single Base Substitution A-G INTRON HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN551-S.SNP.1:33039417 chr01:033039417 0 W/33039417-33039417 FN551-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g57160 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3090-S.SNP.1:33051924 chr01:033051924 0 W/33051924-33051924 FN3090-S SNP C -> T AC=1;AN=184;BQB=0.956854;DP=2872;DP4=1402,1367,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.00156e-05;MQSB=0.994264;RPB=0.585672;SGB=35.1773;VDB=0.202829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L74F|838|LOC_Os01g57210|protein_coding|CODING|LOC_Os01g57210.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L74F|796|LOC_Os01g57210|protein_coding|CODING|LOC_Os01g57210.2|3|1) FN3911-S.SNP.1:33057614 chr01:033057614 0 W/33057614-33057614 FN3911-S SNP C -> T AC=1;AN=158;BQB=0.923921;DP=2506;DP4=1263,1155,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.00119713;MQB=0.0860449;MQSB=0.893436;RPB=0.991701;SGB=47.0672;VDB=0.743718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S782L|838|LOC_Os01g57210|protein_coding|CODING|LOC_Os01g57210.1|15|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S782L|796|LOC_Os01g57210|protein_coding|CODING|LOC_Os01g57210.2|15|1) FN4081-S.SNP.1:33068422 chr01:033068422 0 W/33068422-33068422 FN4081-S SNP G -> A AC=1;AN=182;BQB=0.866756;DP=2963;DP4=1569,1283,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.55805e-07;MQSB=0.953452;RPB=0.435371;SGB=39.6007;VDB=0.870652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:33073022 chr01:033073022 0 W/33073022-33073022 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.808405;DP=3549;DP4=1843,1499,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.10354e-06;MQSB=0.782222;RPB=0.979187;SGB=8.64371;VDB=0.0222304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.1:33081710 chr01:033081710 0 W/33081710-33081710 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.593413;DP=5408;DP4=2614,2620,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08551e-09;MQSB=0.82313;RPB=0.981341;SGB=43.8747;VDB=0.702026;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.1:33083075 chr01:033083075 0 W/33083075-33083075 FN882-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN3551-S.SNP.1:33083322 chr01:033083322 0 W/33083322-33083322 FN3551-S SNP G -> C AC=1;AN=188;BQB=0.876706;DP=4589;DP4=1789,2596,12,15;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0165613;MQB=0.00252503;MQSB=0;RPB=0.97621;SGB=22.5144;VDB=0.781342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A338P|349|LOC_Os01g57250|protein_coding|CODING|LOC_Os01g57250.1|1|1) FN945-S.SNP.1:33084256 chr01:033084256 0 W/33084256-33084256 FN945-S Single Base Substitution G-A INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2499.SNP.1:33084673 chr01:033084673 0 W/33084673-33084673 FN2499 SNP C -> A AC=1;AN=200;BQB=0.999774;DP=4810;DP4=2359,2181,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84912e-14;MQSB=0.998935;RPB=0.554958;SGB=42.5108;VDB=0.906639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.1:33087102 chr01:033087102 0 W/33087102-33087102 FN1468-S Single Base Substitution A-G INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN2450.SNP.1:33090237 chr01:033090237 0 W/33090237-33090237 FN2450 SNP C -> T AC=2;AN=200;BQB=0.858705;DP=5167;DP4=2712,2116,25,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.34278e-21;MQSB=0.798462;RPB=0.405487;SGB=130.399;VDB=0.827455;EFF=UTR_3_PRIME(MODIFIER||209||213|LOC_Os01g57260|protein_coding|CODING|LOC_Os01g57260.1|1|1) FN-119.SNP.1:33091569 chr01:033091569 0 W/33091569-33091569 FN-119 Single Base Substitution G-A INTERGENIC HOMO SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3630-S.SNP.1:33096186 chr01:033096186 0 W/33096186-33096186 FN3630-S SNP C -> T AC=2;AN=190;BQB=0.86137;DP=2720;DP4=1356,1235,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.37433e-11;MQSB=0.90786;RPB=0.921032;SGB=80.9724;VDB=0.615901;EFF=UTR_3_PRIME(MODIFIER||220||1273|LOC_Os01g57270|protein_coding|CODING|LOC_Os01g57270.1|1|1),UTR_3_PRIME(MODIFIER||220||1273|LOC_Os01g57270|protein_coding|CODING|LOC_Os01g57270.2|2|1) FN2588-S.SNP.1:33096893 chr01:033096893 0 W/33096893-33096893 FN2588-S SNP G -> T AC=1;AN=186;BQB=0.699065;DP=3843;DP4=1760,1896,11,15;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=7.5322e-14;MQSB=0.699538;RPB=0.985816;SGB=83.2905;VDB=0.342708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.1:33099868 chr01:033099868 0 W/33099868-33099868 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.52711;DP=3447;DP4=1633,1770,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20303e-08;MQSB=0.997119;RPB=0.722636;SGB=-38.278;VDB=0.812827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V37M|1327|LOC_Os01g57280|protein_coding|CODING|LOC_Os01g57280.1|2|1),START_GAINED(LOW||||1288|LOC_Os01g57280|protein_coding|CODING|LOC_Os01g57280.2|2|1),START_GAINED(LOW||||1288|LOC_Os01g57280|protein_coding|CODING|LOC_Os01g57280.3|2|1),UTR_5_PRIME(MODIFIER||9||1288|LOC_Os01g57280|protein_coding|CODING|LOC_Os01g57280.2|2|1),UTR_5_PRIME(MODIFIER||9||1288|LOC_Os01g57280|protein_coding|CODING|LOC_Os01g57280.3|2|1) FN2458.SNP.1:33110199 chr01:033110199 0 W/33110199-33110199 FN2458 SNP T -> C AC=1;AN=200;BQB=0.910585;DP=3385;DP4=1288,1638,8,9;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.175185;MQB=1;MQSB=6.75073e-15;RPB=0.955049;SGB=72.6852;VDB=0.176204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.1:33144487 chr01:033144487 0 W/33144487-33144487 FN2697-S SNP A -> G AC=1;AN=200;BQB=0.354627;DP=5113;DP4=2436,2375,2,32;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03423e-19;MQSB=0.00449431;RPB=0.00960515;SGB=-80.6278;VDB=0.321686;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K1121E|1290|LOC_Os01g57340|protein_coding|CODING|LOC_Os01g57340.1|1|1),INTRON(MODIFIER||||521|LOC_Os01g57350|protein_coding|CODING|LOC_Os01g57350.2|10|1) FN-174.SNP.1:33160571 chr01:033160571 0 W/33160571-33160571 FN-174 Single Base Substitution G-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2725-S.SNP.1:33162737 chr01:033162737 0 W/33162737-33162737 FN2725-S SNP C -> G AC=1;AN=200;BQB=0.715305;DP=5089;DP4=2029,2775,3,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34601e-09;MQSB=0.837763;RPB=0.634579;SGB=43.8747;VDB=0.939155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.1:33165636 chr01:033165636 0 W/33165636-33165636 FN3569-S SNP G -> C AC=2;AN=188;BQB=0.976013;DP=2668;DP4=1274,1308,13,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.90169e-16;MQSB=0.982619;RPB=0.582092;SGB=130.758;VDB=0.21282;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.1:33172980 chr01:033172980 0 W/33172980-33172980 FN520-S Single Base Substitution C-A INTERGENIC HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3839-S.SNP.1:33180696 chr01:033180696 0 W/33180696-33180696 FN3839-S SNP T -> A AC=1;AN=190;BQB=0.985374;DP=1984;DP4=563,1336,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00827036;MQSB=0.00621179;RPB=0.992445;SGB=14.7784;VDB=0.618523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.1:33184846 chr01:033184846 0 W/33184846-33184846 FN2357 SNP A -> C AC=1;AN=192;BQB=0.8744;DP=5141;DP4=2439,2362,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.62854e-16;MQSB=0.914896;RPB=0.897016;SGB=78.9878;VDB=0.904463;EFF=UTR_3_PRIME(MODIFIER||84||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.1|1|1),UTR_3_PRIME(MODIFIER||84||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.2|1|1),UTR_3_PRIME(MODIFIER||84||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.3|1|1) FN2357.SNP.1:33184847 chr01:033184847 0 W/33184847-33184847 FN2357 SNP C -> A AC=1;AN=192;BQB=0.939393;DP=5134;DP4=2475,2393,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.55619e-17;MQSB=0.943835;RPB=0.520256;SGB=54.5574;VDB=0.915652;EFF=UTR_3_PRIME(MODIFIER||85||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.1|1|1),UTR_3_PRIME(MODIFIER||85||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.2|1|1),UTR_3_PRIME(MODIFIER||85||684|LOC_Os01g57410|protein_coding|CODING|LOC_Os01g57410.3|1|1) FN-88.SNP.1:33186961 chr01:033186961 0 W/33186961-33186961 FN-88 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g57420 diacylglycerol kinase, putative, expressed SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN2640-S.SNP.1:33187176 chr01:033187176 0 W/33187176-33187176 FN2640-S SNP T -> C AC=2;AN=200;BQB=0.686106;DP=5111;DP4=2286,2565,35,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15946e-37;MQSB=0.941354;RPB=0.622962;SGB=157.138;VDB=0.840953;EFF=INTRON(MODIFIER||||410|LOC_Os01g57420|protein_coding|CODING|LOC_Os01g57420.2|13|1),INTRON(MODIFIER||||487|LOC_Os01g57420|protein_coding|CODING|LOC_Os01g57420.1|12|1) FN1282-S.SNP.1:33187588 chr01:033187588 0 W/33187588-33187588 FN1282-S Single Base Substitution A-T INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN488-S.SNP.1:33192619 chr01:033192619 0 W/33192619-33192619 FN488-S Single Base Substitution C-T INTRON HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2195-S.SNP.1:33194842 chr01:033194842 0 W/33194842-33194842 FN2195-S SNP G -> A AC=2;AN=190;BQB=0.564774;DP=4741;DP4=2367,2049,24,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.67669e-20;MQSB=0.992835;RPB=0.94962;SGB=38.2964;VDB=0.607351;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.1:33196134 chr01:033196134 0 W/33196134-33196134 FN1758-S SNP A -> T AC=1;AN=188;BQB=0.00884131;DP=4122;DP4=2222,1856,15,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40083e-16;MQSB=0.999965;RPB=0.57399;SGB=-77.9263;VDB=0.0223292;EFF=INTRON(MODIFIER||||416|LOC_Os01g57440|protein_coding|CODING|LOC_Os01g57440.1|3|1) FN1758-S.SNP.1:33196135 chr01:033196135 0 W/33196135-33196135 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.336733;DP=4117;DP4=2219,1858,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5281e-15;MQSB=0.999665;RPB=0.991944;SGB=54.0524;VDB=0.0440261;EFF=INTRON(MODIFIER||||416|LOC_Os01g57440|protein_coding|CODING|LOC_Os01g57440.1|3|1) FN1740-S.SNP.1:33197021 chr01:033197021 0 W/33197021-33197021 FN1740-S SNP A -> G AC=2;AN=188;BQB=0.378697;DP=3318;DP4=845,2431,8,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.35662e-13;MQSB=0.919148;RPB=0.168234;SGB=-41.9316;VDB=0.716329;EFF=INTRON(MODIFIER||||416|LOC_Os01g57440|protein_coding|CODING|LOC_Os01g57440.1|2|1) FN3780-S.SNP.1:33198489 chr01:033198489 0 W/33198489-33198489 FN3780-S SNP T -> C AC=2;AN=190;BQB=0.99709;DP=2639;DP4=1392,1176,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.16374e-12;MQSB=0.99867;RPB=0.964068;SGB=53.8699;VDB=0.101616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.1:33203158 chr01:033203158 0 W/33203158-33203158 FN2774-S SNP C -> A AC=1;AN=198;BQB=0.713948;DP=4034;DP4=1799,2035,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.35984e-12;MQSB=0.991482;RPB=0.981517;SGB=14.1348;VDB=0.0563177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.1:33209023 chr01:033209023 0 W/33209023-33209023 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.594626;DP=2335;DP4=1042,1186,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29948e-06;MQSB=0.85788;RPB=0.0388173;SGB=56.6036;VDB=0.228979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.1:33219630 chr01:033219630 0 W/33219630-33219630 FN2492 SNP G -> A AC=1;AN=200;BQB=0.999949;DP=4648;DP4=2296,2152,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06766e-06;MQSB=0.907452;RPB=0.939795;SGB=35.8441;VDB=0.948694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V337I|797|LOC_Os01g57490|protein_coding|CODING|LOC_Os01g57490.1|3|1) FN1162-S.SNP.1:33222619 chr01:033222619 0 W/33222619-33222619 FN1162-S Single Base Substitution G-A INTRON HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3365-S.SNP.1:33223239 chr01:033223239 0 W/33223239-33223239 FN3365-S SNP G -> T AC=2;AN=184;BQB=0.982138;DP=3433;DP4=1819,1432,22,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.80653e-23;MQSB=0.997105;RPB=0.49041;SGB=130.836;VDB=0.0814417;EFF=INTRON(MODIFIER||||797|LOC_Os01g57490|protein_coding|CODING|LOC_Os01g57490.1|10|1) FN661-S.SNP.1:33225716 chr01:033225716 0 W/33225716-33225716 FN661-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2784-S.SNP.1:33226513 chr01:033226513 0 W/33226513-33226513 FN2784-S SNP A -> G AC=1;AN=198;BQB=0.907488;DP=3937;DP4=2251,1409,18,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.58259e-17;MQSB=0.64256;RPB=0.548268;SGB=34.8713;VDB=0.248363;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.1:33227212 chr01:033227212 0 W/33227212-33227212 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN4275-S.SNP.1:33229903 chr01:033229903 0 W/33229903-33229903 FN4275-S SNP A -> C AC=1;AN=170;BQB=0.629523;DP=2914;DP4=1529,1295,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000153235;MQSB=0.999951;RPB=0.999926;SGB=24.5502;VDB=0.651537;EFF=INTRON(MODIFIER||||856|LOC_Os01g57510|protein_coding|CODING|LOC_Os01g57510.1|1|1) FN2430.SNP.1:33233461 chr01:033233461 0 W/33233461-33233461 FN2430 SNP A -> G AC=1;AN=200;BQB=0.570023;DP=4789;DP4=2207,2293,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.33889e-17;MQSB=0.923017;RPB=0.787679;SGB=118.737;VDB=0.214369;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.1:33237701 chr01:033237701 0 W/33237701-33237701 FN367-S Single Base Substitution G-C INTERGENIC HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2436.SNP.1:33240585 chr01:033240585 0 W/33240585-33240585 FN2436 SNP T -> C AC=1;AN=200;BQB=0.98766;DP=4371;DP4=2186,1771,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43182e-13;MQSB=0.993834;RPB=0.972409;SGB=79.9264;VDB=0.804488;EFF=UTR_5_PRIME(MODIFIER||2075||178|LOC_Os01g57540|protein_coding|CODING|LOC_Os01g57540.1|1|1) FN1573-S.SNP.1:33243108 chr01:033243108 0 W/33243108-33243108 FN1573-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2331.SNP.1:33245398 chr01:033245398 0 W/33245398-33245398 FN2331 SNP C -> T AC=1;AN=192;BQB=0.718453;DP=5068;DP4=2670,2070,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74557e-08;MQSB=0.999581;RPB=0.653464;SGB=34.0426;VDB=0.474067;EFF=INTRON(MODIFIER||||358|LOC_Os01g57550|protein_coding|CODING|LOC_Os01g57550.1|1|1),INTRON(MODIFIER||||346|LOC_Os01g57550|protein_coding|CODING|LOC_Os01g57550.2|1|1) FN1764-S.SNP.1:33249402 chr01:033249402 0 W/33249402-33249402 FN1764-S SNP T -> C AC=2;AN=188;BQB=0.99999;DP=4015;DP4=2040,1894,25,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.52335e-22;MQSB=0.976;RPB=0.883462;SGB=0.755789;VDB=0.0511347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y723C|835|LOC_Os01g57560|protein_coding|CODING|LOC_Os01g57560.1|7|1) FN-207.SNP.1:33252392 chr01:033252392 0 W/33252392-33252392 FN-207 Single Base Substitution T-C INTRON HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN987-S.SNP.1:33258013 chr01:033258013 0 W/33258013-33258013 FN987-S Single Base Substitution A-T INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2212-S.SNP.1:33258881 chr01:033258881 0 W/33258881-33258881 FN2212-S SNP G -> A AC=2;AN=190;BQB=0.342408;DP=3704;DP4=1724,1704,21,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000539957;MQB=8.63742e-13;MQSB=0.00107478;RPB=0.987617;SGB=79.845;VDB=0.959911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.1:33276601 chr01:033276601 0 W/33276601-33276601 FN3450-S SNP C -> T AC=2;AN=184;BQB=0.872203;DP=2538;DP4=1352,1103,12,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.17226e-10;MQSB=0.981969;RPB=0.114574;SGB=80.3949;VDB=0.0154058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.1:33277974 chr01:033277974 0 W/33277974-33277974 FN3759-S SNP G -> A AC=2;AN=190;BQB=0.991498;DP=2880;DP4=1404,1345,25,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=3.58087e-11;MQSB=0.509452;RPB=0.873438;SGB=149.281;VDB=0.58101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.1:33291955 chr01:033291955 0 W/33291955-33291955 FN3404-S SNP T -> A AC=1;AN=184;BQB=0.553795;DP=2590;DP4=1279,1216,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00892549;MQSB=0.874174;RPB=0.307553;SGB=26.1347;VDB=0.313883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.1:33298247 chr01:033298247 0 W/33298247-33298247 FN3840-S SNP A -> T AC=1;AN=190;BQB=0.990053;DP=2867;DP4=1284,1491,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21157e-12;MQSB=0.974643;RPB=0.353681;SGB=80.9724;VDB=0.557152;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.1:33304468 chr01:033304468 0 W/33304468-33304468 FN587-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3811-S.SNP.1:33311815 chr01:033311815 0 W/33311815-33311815 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.990145;DP=2613;DP4=1222,1271,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77416e-05;MQSB=0.992248;RPB=0.976631;SGB=39.9877;VDB=0.984591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.1:33318637 chr01:033318637 0 W/33318637-33318637 FN3828-S SNP C -> G AC=1;AN=190;BQB=0.926163;DP=2957;DP4=1395,1460,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.03375e-07;MQSB=0.614797;RPB=0.916888;SGB=21.1058;VDB=0.294849;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A183|434|LOC_Os01g57630|protein_coding|CODING|LOC_Os01g57630.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A183|434|LOC_Os01g57630|protein_coding|CODING|LOC_Os01g57630.3|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A183|434|LOC_Os01g57630|protein_coding|CODING|LOC_Os01g57630.2|1|1) FN1097-S.SNP.1:33320081 chr01:033320081 0 W/33320081-33320081 FN1097-S Single Base Substitution A-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN355-S.SNP.1:33328551 chr01:033328551 0 W/33328551-33328551 FN355-S Single Base Substitution T-G INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2487.SNP.1:33335671 chr01:033335671 0 W/33335671-33335671 FN2487 SNP C -> A AC=1;AN=200;BQB=0.858189;DP=5013;DP4=2261,2473,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54248e-12;MQSB=0.864843;RPB=0.962796;SGB=65.5058;VDB=0.487321;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.1:33354477 chr01:033354477 0 W/33354477-33354477 FN2324 SNP G -> A AC=2;AN=192;BQB=0.240235;DP=5028;DP4=2237,2345,16,11;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00218775;MQB=9.14731e-10;MQSB=0.400531;RPB=0.210065;SGB=117.676;VDB=0.180533;EFF=INTERGENIC(MODIFIER||||||||||1) FN4036-S.SNP.1:33357028 chr01:033357028 0 W/33357028-33357028 FN4036-S SNP C -> A AC=1;AN=168;BQB=0.309386;DP=2760;DP4=1493,1121,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000362319;MQB=0.000418538;MQSB=0.000817495;RPB=0.526438;SGB=-1.53256;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.1:33359475 chr01:033359475 0 W/33359475-33359475 W360-2S-2 Single Base Substitution G-T UTR_3_PRIME HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3827-S.SNP.1:33376032 chr01:033376032 0 W/33376032-33376032 FN3827-S SNP G -> A AC=1;AN=190;BQB=0.91307;DP=2419;DP4=1162,1169,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21009e-10;MQSB=0.990378;RPB=0.589606;SGB=76.4186;VDB=0.682974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.1:33376601 chr01:033376601 0 W/33376601-33376601 FN3978-S SNP A -> G AC=1;AN=168;BQB=0.891775;DP=2509;DP4=1230,1202,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08959e-06;MQSB=0.960935;RPB=0.890139;SGB=38.8805;VDB=0.532765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.1:33383655 chr01:033383655 0 W/33383655-33383655 FN2734-S SNP C -> A AC=1;AN=200;BQB=0.718528;DP=4559;DP4=2196,2119,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02337e-21;MQSB=0.67689;RPB=0.988213;SGB=35.1726;VDB=0.810577;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E120*|336|LOC_Os01g57730|protein_coding|CODING|LOC_Os01g57730.1|2|1);LOF=(LOC_Os01g57730|LOC_Os01g57730|1|1.00);NMD=(LOC_Os01g57730|LOC_Os01g57730|1|1.00) FN2209-S.SNP.1:33387095 chr01:033387095 0 W/33387095-33387095 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.925868;DP=4872;DP4=2331,2242,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205255;MQB=6.07414e-07;MQSB=0.436187;RPB=0.990303;SGB=53.6492;VDB=0.938216;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.1:33389482 chr01:033389482 0 W/33389482-33389482 FN703-S Single Base Substitution T-A INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN-196.SNP.1:33398332 chr01:033398332 0 W/33398332-33398332 FN-196 Single Base Substitution C-T INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3700-S.SNP.1:33398332 chr01:033398332 0 W/33398332-33398332 FN3700-S SNP C -> T AC=1;AN=190;BQB=0.978101;DP=2765;DP4=1534,1107,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13555e-08;MQSB=0.992746;RPB=0.782363;SGB=36.1006;VDB=0.414247;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.1:33404613 chr01:033404613 0 W/33404613-33404613 FN813-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g57760 retrotransposon protein, putative, unclassified, expressed SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN2598-S.SNP.1:33406227 chr01:033406227 0 W/33406227-33406227 FN2598-S SNP C -> T AC=1;AN=198;BQB=0.268202;DP=4457;DP4=2052,2120,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24336e-10;MQSB=0.746481;RPB=0.976973;SGB=-12.0504;VDB=0.235683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.1:33406233 chr01:033406233 0 W/33406233-33406233 FN2598-S SNP T -> C AC=1;AN=198;BQB=0.428612;DP=4463;DP4=2016,2114,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000224065;MQB=1.20817e-10;MQSB=0.906251;RPB=0.692483;SGB=37.1297;VDB=0.435737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.1:33406642 chr01:033406642 0 W/33406642-33406642 FN2626-S SNP A -> G AC=1;AN=200;BQB=0.713761;DP=4627;DP4=2164,2235,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69365e-10;MQSB=0.998212;RPB=0.945584;SGB=-34.9207;VDB=0.45851;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.1:33408685 chr01:033408685 0 W/33408685-33408685 FN495-S Single Base Substitution G-T INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN_1017-1.SNP.1:33408878 chr01:033408878 0 W/33408878-33408878 FN_1017-1 Single Base Substitution A-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3978-S.SNP.1:33409376 chr01:033409376 0 W/33409376-33409376 FN3978-S SNP T -> C AC=1;AN=168;BQB=0.871563;DP=2876;DP4=1286,1510,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.42534e-09;MQSB=0.704219;RPB=0.681305;SGB=45.0404;VDB=0.197841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.1:33414909 chr01:033414909 0 W/33414909-33414909 FN4041-S SNP C -> T AC=1;AN=168;BQB=0.886446;DP=2484;DP4=1012,1322,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.51212e-07;MQSB=0.614948;RPB=0.922398;SGB=43.3113;VDB=0.967041;EFF=INTRON(MODIFIER||||263|LOC_Os01g57770|protein_coding|CODING|LOC_Os01g57770.1|2|1) FN354-S.SNP.1:33417794 chr01:033417794 0 W/33417794-33417794 FN354-S Single Base Substitution C-T INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3933-S.SNP.1:33420632 chr01:033420632 0 W/33420632-33420632 FN3933-S SNP G -> A AC=2;AN=158;BQB=0.648266;DP=2322;DP4=1168,1064,12,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.60952e-09;MQSB=0.839155;RPB=0.88381;SGB=74.5068;VDB=0.891518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.1:33427861 chr01:033427861 0 W/33427861-33427861 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.987763;DP=2991;DP4=1359,1489,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.3973e-08;MQSB=0.755556;RPB=0.990149;SGB=57.786;VDB=0.847282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.1:33432004 chr01:033432004 0 W/33432004-33432004 FN2383 SNP C -> G AC=1;AN=192;BQB=0.909992;DP=4830;DP4=2277,2250,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.12794e-10;MQSB=0.99983;RPB=0.780704;SGB=15.1765;VDB=0.5939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S942W|1800|LOC_Os01g57800|protein_coding|CODING|LOC_Os01g57800.1|5|1) FN1685-S.SNP.1:33436845 chr01:033436845 0 W/33436845-33436845 FN1685-S SNP T -> G AC=1;AN=188;BQB=0.161171;DP=3229;DP4=1468,1720,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.44312e-07;MQSB=0.521918;RPB=0.576989;SGB=-37.3645;VDB=0.65592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K557Q|778|LOC_Os01g57810|protein_coding|CODING|LOC_Os01g57810.1|6|1) FN-106.SNP.1:33440705 chr01:033440705 0 W/33440705-33440705 FN-106 Single Base Substitution T-G INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3983-S.SNP.1:33443657 chr01:033443657 0 W/33443657-33443657 FN3983-S SNP T -> A AC=2;AN=168;BQB=0.321897;DP=2323;DP4=1097,971,11,7;HOB=0.0235261;ICB=0.494119;MQ=36;MQ0F=0.0400344;MQB=0.161949;MQSB=0.258513;RPB=0.435543;SGB=29.4772;VDB=0.827646;EFF=INTRON(MODIFIER||||958|LOC_Os01g57830|protein_coding|CODING|LOC_Os01g57830.1|1|1) FN1600-S.SNP.1:33444629 chr01:033444629 0 W/33444629-33444629 FN1600-S Single Base Substitution G-A INTRON Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN-156.SNP.1:33446938 chr01:033446938 0 W/33446938-33446938 FN-156 Single Base Substitution C-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-156.SNP.1:33446939 chr01:033446939 0 W/33446939-33446939 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-181.SNP.1:33454440 chr01:033454440 0 W/33454440-33454440 FN-181 Single Base Substitution G-T INTRON HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3974-S.SNP.1:33456900 chr01:033456900 0 W/33456900-33456900 FN3974-S SNP C -> T AC=1;AN=168;BQB=0.841967;DP=2862;DP4=1403,1307,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.41804e-11;MQSB=0.997971;RPB=0.774547;SGB=58.7637;VDB=0.146847;EFF=INTRON(MODIFIER||||546|LOC_Os01g57854|protein_coding|CODING|LOC_Os01g57854.1|1|1) FN-246.SNP.1:33463059 chr01:033463059 0 W/33463059-33463059 FN-246 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g57870 disease resistance protein RPS2, putative, expressed SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN1761-S.SNP.1:33467625 chr01:033467625 0 W/33467625-33467625 FN1761-S SNP C -> G AC=1;AN=188;BQB=0.991907;DP=2721;DP4=1288,1382,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2991e-07;MQSB=0.900642;RPB=0.95897;SGB=28.6195;VDB=0.565734;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.1:33469984 chr01:033469984 0 W/33469984-33469984 FN-83 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g57880 plastocyanin-like domain containing protein, putative, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN587-S.SNP.1:33477006 chr01:033477006 0 W/33477006-33477006 FN587-S Single Base Substitution T-C INTRON HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN587-S.SNP.1:33477007 chr01:033477007 0 W/33477007-33477007 FN587-S Single Base Substitution T-C INTRON HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2573-S.SNP.1:33490570 chr01:033490570 0 W/33490570-33490570 FN2573-S SNP C -> A AC=2;AN=198;BQB=0.76744;DP=4457;DP4=2234,1985,17,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.56921e-16;MQSB=0.896207;RPB=0.866329;SGB=94.0758;VDB=0.53709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D253Y|329|LOC_Os01g57930|protein_coding|CODING|LOC_Os01g57930.1|6|1) FN3966-S.SNP.1:33505054 chr01:033505054 0 W/33505054-33505054 FN3966-S SNP T -> C AC=1;AN=168;BQB=0.88537;DP=4189;DP4=2589,1215,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.341132;MQB=0.0293585;MQSB=0;RPB=0.811419;SGB=56.6036;VDB=0.0759711;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.1:33507187 chr01:033507187 0 W/33507187-33507187 FN806-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN-28.SNP.1:33553174 chr01:033553174 0 W/33553174-33553174 FN-28 Single Base Substitution T-G INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN4124-S.SNP.1:33566523 chr01:033566523 0 W/33566523-33566523 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.997866;DP=3048;DP4=1654,1321,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0433071;MQB=1.6432e-05;MQSB=0.00243369;RPB=0.957577;SGB=62.1548;VDB=0.866636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.1:33599429 chr01:033599429 0 W/33599429-33599429 FN2452 SNP T -> C AC=1;AN=200;BQB=0.994154;DP=4564;DP4=2200,1870,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17129e-07;MQSB=0.502318;RPB=0.97047;SGB=19.0642;VDB=0.282505;EFF=INTERGENIC(MODIFIER||||||||||1) FN-100.SNP.1:33603139 chr01:033603139 0 W/33603139-33603139 FN-100 Single Base Substitution A-G INTRON HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN3843-S.SNP.1:33604051 chr01:033604051 0 W/33604051-33604051 FN3843-S SNP A -> T AC=1;AN=190;BQB=1;DP=2920;DP4=1085,1699,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30293e-09;MQSB=0.998425;RPB=0.339555;SGB=28.7675;VDB=0.198311;EFF=INTRON(MODIFIER||||575|LOC_Os01g58100|protein_coding|CODING|LOC_Os01g58100.1|1|1) FN779-S.SNP.1:33604895 chr01:033604895 0 W/33604895-33604895 FN779-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2556-S.SNP.1:33613506 chr01:033613506 0 W/33613506-33613506 FN2556-S SNP G -> A AC=2;AN=198;BQB=0.983033;DP=4133;DP4=1936,1976,27,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000241955;MQB=1.4573e-27;MQSB=0.951173;RPB=0.960609;SGB=214.973;VDB=0.586692;EFF=INTRON(MODIFIER||||539|LOC_Os01g58114|protein_coding|CODING|LOC_Os01g58114.2|1|1),INTRON(MODIFIER||||545|LOC_Os01g58114|protein_coding|CODING|LOC_Os01g58114.1|1|1) FN-217.SNP.1:33614032 chr01:033614032 0 W/33614032-33614032 FN-217 Single Base Substitution T-A INTRON HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3599-S.SNP.1:33615147 chr01:033615147 0 W/33615147-33615147 FN3599-S SNP G -> A AC=1;AN=188;BQB=0.951025;DP=3093;DP4=1333,1686,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07414e-09;MQSB=0.991526;RPB=0.237619;SGB=62.6088;VDB=0.357394;EFF=INTRON(MODIFIER||||545|LOC_Os01g58114|protein_coding|CODING|LOC_Os01g58114.1|1|1) FN1465-S.SNP.1:33616785 chr01:033616785 0 W/33616785-33616785 FN1465-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3889-S.SNP.1:33618573 chr01:033618573 0 W/33618573-33618573 FN3889-S SNP A -> G AC=1;AN=158;BQB=0.747807;DP=2968;DP4=1492,1334,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.12368e-08;MQSB=0.955933;RPB=0.0996919;SGB=47.5512;VDB=0.160568;EFF=UTR_3_PRIME(MODIFIER||99||112|LOC_Os01g58130|protein_coding|CODING|LOC_Os01g58130.1|1|1) FN2791-S.SNP.1:33620547 chr01:033620547 0 W/33620547-33620547 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.841677;DP=2489;DP4=782,1195,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.76404e-05;MQSB=0.467813;RPB=0.859442;SGB=-15.026;VDB=0.676733;EFF=INTERGENIC(MODIFIER||||||||||1) FN4084-S.SNP.1:33625405 chr01:033625405 0 W/33625405-33625405 FN4084-S SNP T -> C AC=1;AN=182;BQB=0.835886;DP=3068;DP4=1433,1560,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03614e-08;MQSB=0.846376;RPB=0.149526;SGB=42.6494;VDB=0.525709;EFF=UTR_3_PRIME(MODIFIER||178||106|LOC_Os01g58140|protein_coding|CODING|LOC_Os01g58140.1|1|1) FN2419.SNP.1:33637558 chr01:033637558 0 W/33637558-33637558 FN2419 SNP G -> C AC=1;AN=200;BQB=0.237901;DP=5543;DP4=2551,2517,27,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.80505e-20;MQSB=0.786267;RPB=0.634539;SGB=-184.987;VDB=0.0696638;EFF=INTERGENIC(MODIFIER||||||||||1) FN1547-S.SNP.1:33643847 chr01:033643847 0 W/33643847-33643847 FN1547-S Single Base Substitution C-T INTRON HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2353.SNP.1:33651747 chr01:033651747 0 W/33651747-33651747 FN2353 SNP C -> T AC=2;AN=192;BQB=0.997576;DP=5251;DP4=2577,2418,22,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.78061e-21;MQSB=0.947765;RPB=0.881545;SGB=158.755;VDB=0.474254;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K53|119|LOC_Os01g58220|protein_coding|CODING|LOC_Os01g58220.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K53|115|LOC_Os01g58220|protein_coding|CODING|LOC_Os01g58220.2|3|1) FN3308-S.SNP.1:33655459 chr01:033655459 0 W/33655459-33655459 FN3308-S SNP T -> C AC=1;AN=184;BQB=0.950825;DP=3927;DP4=1781,1854,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.98042e-08;MQSB=0.943721;RPB=0.397391;SGB=8.32411;VDB=0.960573;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.1:33655492 chr01:033655492 0 W/33655492-33655492 FN899-S Single Base Substitution G-A INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3105-S.SNP.1:33670341 chr01:033670341 0 W/33670341-33670341 FN3105-S SNP G -> A AC=2;AN=184;BQB=0.998493;DP=2766;DP4=1151,1487,18,16;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0010846;MQB=4.68939e-06;MQSB=0.37893;RPB=0.998164;SGB=148.222;VDB=0.848984;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A243|736|LOC_Os01g58240|protein_coding|CODING|LOC_Os01g58240.1|6|1) FN3481-S.SNP.1:33670341 chr01:033670341 0 W/33670341-33670341 FN3481-S SNP G -> A AC=2;AN=184;BQB=0.989681;DP=2699;DP4=1156,1428,15,15;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00111152;MQB=4.37084e-06;MQSB=0.981056;RPB=0.996224;SGB=130.135;VDB=0.202297;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A243|736|LOC_Os01g58240|protein_coding|CODING|LOC_Os01g58240.1|6|1) FN3992-S.SNP.1:33670341 chr01:033670341 0 W/33670341-33670341 FN3992-S SNP G -> A AC=2;AN=168;BQB=0.754256;DP=2005;DP4=852,1031,14,13;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00149626;MQB=2.32126e-05;MQSB=0.655509;RPB=0.65977;SGB=114.204;VDB=0.336629;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A243|736|LOC_Os01g58240|protein_coding|CODING|LOC_Os01g58240.1|6|1) FN4240-S.SNP.1:33670341 chr01:033670341 0 W/33670341-33670341 FN4240-S SNP G -> A AC=2;AN=170;BQB=0.892102;DP=2261;DP4=1024,1143,10,9;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00132685;MQB=0.00444806;MQSB=0.0162461;RPB=0.652342;SGB=78.9707;VDB=0.823183;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A243|736|LOC_Os01g58240|protein_coding|CODING|LOC_Os01g58240.1|6|1) FN3815-S.SNP.1:33673121 chr01:033673121 0 W/33673121-33673121 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.361112;DP=2606;DP4=1249,1261,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000142058;MQSB=0.998846;RPB=0.421375;SGB=25.439;VDB=0.781995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.1:33691579 chr01:033691579 0 W/33691579-33691579 FN3417-S SNP A -> G AC=2;AN=184;BQB=0.433596;DP=2635;DP4=1165,1303,13,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.6847e-16;MQSB=0.618977;RPB=0.957533;SGB=-44.36;VDB=0.53723;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.1:33698288 chr01:033698288 0 W/33698288-33698288 FN511-S Single Base Substitution G-A INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3401-S.SNP.1:33699610 chr01:033699610 0 W/33699610-33699610 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.982811;DP=3237;DP4=1405,1721,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.22907e-09;MQSB=0.910604;RPB=0.303409;SGB=66.8296;VDB=0.197212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.1:33702775 chr01:033702775 0 W/33702775-33702775 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.947853;DP=3010;DP4=1433,1512,1,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27918e-05;MQSB=0.988383;RPB=0.728463;SGB=39.8925;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.1:33703095 chr01:033703095 0 W/33703095-33703095 FN-311 Single Base Substitution G-A INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN-92.SNP.1:33711695 chr01:033711695 0 W/33711695-33711695 FN-92 Single Base Substitution G-C INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN_815-4-1.SNP.1:33715503 chr01:033715503 0 W/33715503-33715503 FN_815-4-1 Single Base Substitution T-A HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN2579-S.SNP.1:33720305 chr01:033720305 0 W/33720305-33720305 FN2579-S SNP A -> C AC=1;AN=198;BQB=0.850885;DP=4139;DP4=1953,1934,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=6.20443e-13;MQSB=0.486135;RPB=0.610747;SGB=109.285;VDB=0.384146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.1:33723307 chr01:033723307 0 W/33723307-33723307 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.897023;DP=2468;DP4=1099,1195,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.73105e-06;MQSB=0.401004;RPB=0.571107;SGB=14.3409;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.1:33723415 chr01:033723415 0 W/33723415-33723415 FN3509-S SNP T -> A AC=1;AN=188;BQB=0.755288;DP=2781;DP4=1430,1235,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00260151;MQSB=0.926506;RPB=0.874355;SGB=18.2682;VDB=0.269436;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.1:33729527 chr01:033729527 0 W/33729527-33729527 FN4101-S SNP T -> G AC=1;AN=182;BQB=0.99348;DP=3056;DP4=1487,1499,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.37463e-10;MQSB=0.983792;RPB=0.694332;SGB=46.1603;VDB=0.907038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.1:33735448 chr01:033735448 0 W/33735448-33735448 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.0610851;DP=3927;DP4=1498,2194,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.26815e-06;MQSB=0.982045;RPB=0.0677007;SGB=18.9639;VDB=0.824196;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A46V|177|LOC_Os01g58390|protein_coding|CODING|LOC_Os01g58390.1|1|1) FN-201.SNP.1:33736563 chr01:033736563 0 W/33736563-33736563 FN-201 Single Base Substitution G-A INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN-193.SNP.1:33737114 chr01:033737114 0 W/33737114-33737114 FN-193 Single Base Substitution T-A INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN3597-S.SNP.1:33746148 chr01:033746148 0 W/33746148-33746148 FN3597-S SNP G -> A AC=1;AN=188;BQB=0.999971;DP=3632;DP4=2043,1508,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00027533;MQB=9.17777e-11;MQSB=0.772996;RPB=0.821947;SGB=80.782;VDB=0.251757;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.1:33748671 chr01:033748671 0 W/33748671-33748671 FN439-S Single Base Substitution G-A INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1219-S.SNP.1:33756872 chr01:033756872 0 W/33756872-33756872 FN1219-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN672-S.SNP.1:33758129 chr01:033758129 0 W/33758129-33758129 FN672-S Single Base Substitution G-A INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3795-S.SNP.1:33763398 chr01:033763398 0 W/33763398-33763398 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.971833;DP=2812;DP4=1250,1449,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85891e-05;MQSB=0.970517;RPB=0.846579;SGB=26.3271;VDB=0.241547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.1:33773067 chr01:033773067 0 W/33773067-33773067 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.997995;DP=4869;DP4=2299,2312,16,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15227e-21;MQSB=0.989632;RPB=0.995029;SGB=160.183;VDB=0.951694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.1:33777610 chr01:033777610 0 W/33777610-33777610 FN2254-S SNP A -> T AC=1;AN=190;BQB=0.621522;DP=4905;DP4=2492,2178,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.83268e-09;MQSB=0.6201;RPB=0.978067;SGB=76.4186;VDB=0.948104;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN-104 Single Base Substitution G-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-245.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN-245 Single Base Substitution G-T INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-370.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN-370 Single Base Substitution G-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-390.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN-390 Single Base Substitution G-T INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1501-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN1501-S Single Base Substitution G-T INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1528-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN1528-S Single Base Substitution G-T INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2165-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN2165-S SNP G -> T AC=2;AN=168;BQB=0.363743;DP=3876;DP4=1679,2144,18,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05108e-21;MQSB=0.997555;RPB=0.501721;SGB=-264.572;VDB=0.251072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN2578-S SNP G -> T AC=2;AN=198;BQB=0.93333;DP=4619;DP4=2234,2032,13,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.90038e-16;MQSB=0.509793;RPB=0.516781;SGB=83.2905;VDB=0.555346;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN3372-S SNP G -> T AC=1;AN=184;BQB=0.996545;DP=3497;DP4=1839,1444,10,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.20663e-07;MQSB=0.996797;RPB=0.227538;SGB=28.7043;VDB=0.638963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN3549-S SNP G -> T AC=2;AN=188;BQB=0.782594;DP=3287;DP4=1721,1364,16,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.22409e-13;MQSB=0.999918;RPB=0.289224;SGB=51.5091;VDB=0.903201;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN759-S Single Base Substitution G-T INTERGENIC HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN831-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN831-S Single Base Substitution G-T INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN872-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN872-S Single Base Substitution G-T INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN933-S.SNP.1:33779982 chr01:033779982 0 W/33779982-33779982 FN933-S Single Base Substitution G-T INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-332.SNP.1:33785147 chr01:033785147 0 W/33785147-33785147 FN-332 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g58444 expressed protein SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4135-S.SNP.1:33786352 chr01:033786352 0 W/33786352-33786352 FN4135-S SNP G -> A AC=1;AN=182;BQB=0.942248;DP=3003;DP4=1373,1554,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.20148e-10;MQSB=0.603678;RPB=0.961033;SGB=53.182;VDB=0.717777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.1:33789611 chr01:033789611 0 W/33789611-33789611 FN2497 SNP C -> A AC=1;AN=200;BQB=0.986164;DP=4810;DP4=1782,2775,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002079;MQB=2.54453e-08;MQSB=0.448423;RPB=0.994119;SGB=58.8698;VDB=0.788754;EFF=INTRON(MODIFIER||||185|LOC_Os01g58450|protein_coding|CODING|LOC_Os01g58450.1|2|1) FN2594-S.SNP.1:33794266 chr01:033794266 0 W/33794266-33794266 FN2594-S SNP A -> T AC=1;AN=198;BQB=0.955521;DP=4405;DP4=2109,2131,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02061e-12;MQSB=0.890253;RPB=0.998338;SGB=68.91;VDB=0.674934;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.1:33794648 chr01:033794648 0 W/33794648-33794648 FN809-S Single Base Substitution G-A INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN919-S.SNP.1:33798088 chr01:033798088 0 W/33798088-33798088 FN919-S Single Base Substitution A-G INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN4202-S.SNP.1:33841007 chr01:033841007 0 W/33841007-33841007 FN4202-S SNP A -> G AC=1;AN=170;BQB=0.925228;DP=2943;DP4=1531,1328,12,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96012e-13;MQSB=0.987098;RPB=0.321053;SGB=96.7413;VDB=0.755483;EFF=UTR_3_PRIME(MODIFIER||814||391|LOC_Os01g58550|protein_coding|CODING|LOC_Os01g58550.1|5|1) FN2430.SNP.1:33845003 chr01:033845003 0 W/33845003-33845003 FN2430 SNP T -> C AC=1;AN=200;BQB=0.673415;DP=4705;DP4=2241,2236,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.05083e-07;MQSB=0.441334;RPB=0.99923;SGB=33.0593;VDB=0.416493;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.1:33861947 chr01:033861947 0 W/33861947-33861947 FN-184 Single Base Substitution C-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-178.SNP.1:33864861 chr01:033864861 0 W/33864861-33864861 FN-178 Single Base Substitution G-A INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN664-S.SNP.1:33865850 chr01:033865850 0 W/33865850-33865850 FN664-S Single Base Substitution A-T INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN571-S.SNP.1:33877277 chr01:033877277 0 W/33877277-33877277 FN571-S Single Base Substitution C-T INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN-397.SNP.1:33878396 chr01:033878396 0 W/33878396-33878396 FN-397 Single Base Substitution A-T INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-303.SNP.1:33898523 chr01:033898523 0 W/33898523-33898523 FN-303 Single Base Substitution A-C INTRON HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3842-S.SNP.1:33901762 chr01:033901762 0 W/33901762-33901762 FN3842-S SNP T -> A AC=2;AN=190;BQB=0.945856;DP=2576;DP4=1284,1183,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.95417e-18;MQSB=0.975556;RPB=0.879668;SGB=114.286;VDB=0.510605;EFF=INTRON(MODIFIER||||630|LOC_Os01g58640|protein_coding|CODING|LOC_Os01g58640.1|5|1) FN1583-S.SNP.1:33906265 chr01:033906265 0 W/33906265-33906265 FN1583-S Single Base Substitution C-A INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-226.SNP.1:33907504 chr01:033907504 0 W/33907504-33907504 FN-226 Single Base Substitution T-A INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-272.SNP.1:33907505 chr01:033907505 0 W/33907505-33907505 FN-272 Single Base Substitution A-T INTRON HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN-301.SNP.1:33908145 chr01:033908145 0 W/33908145-33908145 FN-301 Single Base Substitution A-G INTRON HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-264.SNP.1:33926793 chr01:033926793 0 W/33926793-33926793 FN-264 Single Base Substitution G-A INTRON HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN_955-1.SNP.1:33933759 chr01:033933759 0 W/33933759-33933759 FN_955-1 Single Base Substitution A-T HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. W463-2-1.SNP.1:33937921 chr01:033937921 0 W/33937921-33937921 W463-2-1 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1356-S.SNP.1:33942755 chr01:033942755 0 W/33942755-33942755 FN1356-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g58710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2725-S.SNP.1:33942994 chr01:033942994 0 W/33942994-33942994 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.861763;DP=4788;DP4=2366,2233,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00146199;MQB=1.29635e-06;MQSB=0.919755;RPB=0.767746;SGB=29.4541;VDB=0.478779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1340T|1340|LOC_Os01g58710|protein_coding|CODING|LOC_Os01g58710.1|7|1) FN-238.SNP.1:33943386 chr01:033943386 0 W/33943386-33943386 FN-238 Single Base Substitution C-G INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN703-S.SNP.1:33946824 chr01:033946824 0 W/33946824-33946824 FN703-S Single Base Substitution C-T INTERGENIC HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN703-S.SNP.1:33946825 chr01:033946825 0 W/33946825-33946825 FN703-S Single Base Substitution A-T INTERGENIC HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3967-S.SNP.1:33947340 chr01:033947340 0 W/33947340-33947340 FN3967-S SNP G -> A AC=1;AN=182;BQB=0.915627;DP=3340;DP4=1860,1337,20,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.10213e-15;MQSB=0.999908;RPB=0.817015;SGB=91.8015;VDB=0.894603;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.1:33958819 chr01:033958819 0 W/33958819-33958819 FN1429-S Single Base Substitution C-T INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN2173-S.SNP.1:33960681 chr01:033960681 0 W/33960681-33960681 FN2173-S SNP G -> C AC=1;AN=168;BQB=0.00549538;DP=2509;DP4=1360,1075,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000539082;MQSB=0.995083;RPB=0.717407;SGB=29.4772;VDB=0.170987;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A49|67|LOC_Os01g58754|protein_coding|CODING|LOC_Os01g58754.1|1|1) FN2194-S.SNP.1:33964188 chr01:033964188 0 W/33964188-33964188 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.134478;DP=4758;DP4=2162,2317,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000210172;MQB=2.31267e-10;MQSB=0.617286;RPB=0.761074;SGB=-70.442;VDB=0.416727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.1:33965735 chr01:033965735 0 W/33965735-33965735 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.686156;DP=2418;DP4=1229,1055,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.11184e-10;MQSB=0.628217;RPB=0.788757;SGB=35.6659;VDB=0.512495;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.1:33979132 chr01:033979132 0 W/33979132-33979132 FN-87 Single Base Substitution G-A INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN_949-1.SNP.1:33985176 chr01:033985176 0 W/33985176-33985176 FN_949-1 Single Base Substitution C-A HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1668-S.SNP.1:33991436 chr01:033991436 0 W/33991436-33991436 FN1668-S SNP G -> A AC=1;AN=188;BQB=0.45489;DP=4092;DP4=1742,2304,7,19;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.304497;MQB=0.485381;MQSB=0.915622;RPB=0.941351;SGB=-9.56681;VDB=0.983964;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.1:34011074 chr01:034011074 0 W/34011074-34011074 FN775-S Single Base Substitution A-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3376-S.SNP.1:34011209 chr01:034011209 0 W/34011209-34011209 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.898659;DP=3165;DP4=1517,1515,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.94875e-08;MQSB=0.786659;RPB=0.7941;SGB=66.8296;VDB=0.521675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.1:34011789 chr01:034011789 0 W/34011789-34011789 FN2479 SNP G -> A AC=1;AN=200;BQB=0.639948;DP=3511;DP4=1500,1789,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.58287e-11;MQSB=0.99902;RPB=0.846528;SGB=77.2904;VDB=0.303136;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.1:34019110 chr01:034019110 0 W/34019110-34019110 FN718-S Single Base Substitution C-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1680-S.SNP.1:34021115 chr01:034021115 0 W/34021115-34021115 FN1680-S SNP C -> T AC=1;AN=188;BQB=0.688202;DP=2566;DP4=1188,1335,2,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.40315e-10;MQSB=0.187256;RPB=0.919511;SGB=46.6141;VDB=0.299629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.1:34023750 chr01:034023750 0 W/34023750-34023750 FN3665-S SNP G -> T AC=1;AN=190;BQB=0.995521;DP=2658;DP4=1259,1299,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.27721e-17;MQSB=0.587412;RPB=0.774708;SGB=135.619;VDB=0.67373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.1:34028533 chr01:034028533 0 W/34028533-34028533 FN2475 SNP C -> G AC=1;AN=200;BQB=0.722221;DP=4429;DP4=2078,2009,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.04866e-10;MQSB=0.23833;RPB=0.482862;SGB=91.1059;VDB=0.464033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.1:34028700 chr01:034028700 0 W/34028700-34028700 FN2483 SNP G -> A AC=1;AN=200;BQB=0.861526;DP=4381;DP4=2245,1828,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01827e-12;MQSB=0.00131225;RPB=0.987445;SGB=109.527;VDB=0.373817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.1:34031737 chr01:034031737 0 W/34031737-34031737 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.0518449;DP=4438;DP4=2105,2284,8,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.28746e-08;MQSB=0.861753;RPB=0.806088;SGB=-200.044;VDB=0.569905;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.1:34032394 chr01:034032394 0 W/34032394-34032394 FN-102 Single Base Substitution C-T INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1061-S.SNP.1:34037764 chr01:034037764 0 W/34037764-34037764 FN1061-S Single Base Substitution C-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2377.SNP.1:34052181 chr01:034052181 0 W/34052181-34052181 FN2377 SNP G -> A AC=1;AN=192;BQB=0.0946727;DP=7905;DP4=3648,3751,86,15;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0643896;MQB=2.41626e-17;MQSB=5.9031e-12;RPB=0.000240957;SGB=-4505.84;VDB=3.26345e-10;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R1479*|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|9|1);LOF=(LOC_Os01g58920|LOC_Os01g58920|1|1.00);NMD=(LOC_Os01g58920|LOC_Os01g58920|1|1.00) FN1763-S.SNP.1:34052599 chr01:034052599 0 W/34052599-34052599 FN1763-S SNP G -> A AC=1;AN=188;BQB=0.00760599;DP=2446;DP4=1348,1048,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00858545;MQB=0.000789239;MQSB=0.929263;RPB=0.159778;SGB=-117.892;VDB=0.325976;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1339|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|9|1) FN2304.SNP.1:34054276 chr01:034054276 0 W/34054276-34054276 FN2304 SNP G -> A AC=1;AN=192;BQB=0.617388;DP=5561;DP4=2696,2594,6,15;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.195109;MQB=0.999713;MQSB=0;RPB=0.41578;SGB=-37.5061;VDB=0.111504;EFF=INTRON(MODIFIER||||1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|7|1) FN4174-S.SNP.1:34054432 chr01:034054432 0 W/34054432-34054432 FN4174-S SNP G -> T AC=1;AN=170;BQB=0.807792;DP=3752;DP4=2080,1578,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.144456;MQB=0.402121;MQSB=0.0300587;RPB=0.745058;SGB=22.3266;VDB=0.460047;EFF=INTRON(MODIFIER||||1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|7|1) FN-30.SNP.1:34055245 chr01:034055245 0 W/34055245-34055245 FN-30 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2575-S.SNP.1:34055245 chr01:034055245 0 W/34055245-34055245 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.915137;DP=4203;DP4=2032,1906,16,23;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.022365;MQB=4.84222e-15;MQSB=0.144228;RPB=0.680425;SGB=130.027;VDB=0.712645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T706I|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN3383-S.SNP.1:34055245 chr01:034055245 0 W/34055245-34055245 FN3383-S SNP G -> A AC=2;AN=184;BQB=0.896459;DP=3628;DP4=1835,1643,17,25;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0124035;MQB=4.34953e-18;MQSB=0.349332;RPB=0.028931;SGB=184.396;VDB=0.430121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T706I|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN3776-S.SNP.1:34055245 chr01:034055245 0 W/34055245-34055245 FN3776-S SNP G -> A AC=2;AN=190;BQB=0.983496;DP=3357;DP4=1814,1401,13,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0116175;MQB=8.77384e-13;MQSB=0.470924;RPB=0.999454;SGB=108.296;VDB=0.919366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T706I|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN723-S.SNP.1:34055245 chr01:034055245 0 W/34055245-34055245 FN723-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN-30.SNP.1:34055246 chr01:034055246 0 W/34055246-34055246 FN-30 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2575-S.SNP.1:34055246 chr01:034055246 0 W/34055246-34055246 FN2575-S SNP T -> A AC=1;AN=198;BQB=0.493205;DP=4217;DP4=2067,1910,16,24;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0225279;MQB=1.70972e-14;MQSB=0.0899663;RPB=0.668208;SGB=44.442;VDB=0.622753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T706S|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN3383-S.SNP.1:34055246 chr01:034055246 0 W/34055246-34055246 FN3383-S SNP T -> A AC=2;AN=184;BQB=0.989037;DP=3627;DP4=1848,1620,19,27;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0126827;MQB=9.77108e-20;MQSB=0.403303;RPB=0.10668;SGB=0.417852;VDB=0.618285;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T706S|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN3776-S.SNP.1:34055246 chr01:034055246 0 W/34055246-34055246 FN3776-S SNP T -> A AC=2;AN=190;BQB=0.964557;DP=3360;DP4=1818,1406,16,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0122024;MQB=5.67358e-15;MQSB=0.252549;RPB=0.370484;SGB=-77.6727;VDB=0.985337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T706S|1763|LOC_Os01g58920|protein_coding|CODING|LOC_Os01g58920.1|6|1) FN723-S.SNP.1:34055246 chr01:034055246 0 W/34055246-34055246 FN723-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1572-S.SNP.1:34057660 chr01:034057660 0 W/34057660-34057660 FN1572-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN-169.SNP.1:34057664 chr01:034057664 0 W/34057664-34057664 FN-169 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN319-S.SNP.1:34059791 chr01:034059791 0 W/34059791-34059791 FN319-S Single Base Substitution G-T INTRON HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3925-S.SNP.1:34060596 chr01:034060596 0 W/34060596-34060596 FN3925-S SNP A -> C AC=2;AN=158;BQB=0.986794;DP=2781;DP4=1395,1246,26,34;HOB=0.024996;ICB=0.493752;MQ=40;MQ0F=0.0575333;MQB=0.141699;MQSB=3.24577e-06;RPB=0.897392;SGB=251.442;VDB=0.176719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2084-S.SNP.1:34061950 chr01:034061950 0 W/34061950-34061950 FN2084-S SNP A -> T AC=1;AN=168;BQB=0.973842;DP=4657;DP4=2493,2120,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=20;MQ0F=0.284303;MQB=0.0113926;MQSB=0;RPB=0.682535;SGB=19.9297;VDB=0.667203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.1:34062470 chr01:034062470 0 W/34062470-34062470 FN2417 SNP G -> A AC=1;AN=200;BQB=0.414306;DP=3662;DP4=1151,2137,5,15;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0333151;MQB=0.00100688;MQSB=7.21202e-17;RPB=0.993654;SGB=86.5007;VDB=0.282448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.1:34069117 chr01:034069117 0 W/34069117-34069117 FN3449-S SNP C -> T AC=1;AN=184;BQB=0.987011;DP=2769;DP4=887,1780,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78431e-05;MQSB=0.736758;RPB=0.891981;SGB=25.1826;VDB=0.0504901;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.1:34072195 chr01:034072195 0 W/34072195-34072195 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.99954;DP=3188;DP4=1594,1353,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00470514;MQB=4.17443e-05;MQSB=6.79179e-07;RPB=0.0799844;SGB=46.7622;VDB=0.201006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.1:34074151 chr01:034074151 0 W/34074151-34074151 FN3756-S SNP G -> C AC=1;AN=190;BQB=0.898511;DP=2632;DP4=1141,1403,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.90612e-10;MQSB=0.975122;RPB=0.979794;SGB=62.7569;VDB=0.241276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.1:34079544 chr01:034079544 0 W/34079544-34079544 FN1563-S Single Base Substitution G-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1668-S.SNP.1:34083549 chr01:034083549 0 W/34083549-34083549 FN1668-S SNP A -> C AC=1;AN=188;BQB=0.0425239;DP=2468;DP4=600,1827,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.05415e-05;MQSB=0.389091;RPB=0.483618;SGB=-35.081;VDB=0.857158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.1:34086803 chr01:034086803 0 W/34086803-34086803 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.924247;DP=3452;DP4=1380,1938,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.48278e-08;MQSB=0.997905;RPB=0.948021;SGB=43.0708;VDB=0.0944825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.1:34087542 chr01:034087542 0 W/34087542-34087542 FN3512-S SNP G -> T AC=1;AN=188;BQB=0.636693;DP=2718;DP4=1244,1408,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.42606e-06;MQSB=0.996403;RPB=0.791396;SGB=21.8113;VDB=0.0209676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.1:34087543 chr01:034087543 0 W/34087543-34087543 FN3512-S SNP C -> G AC=1;AN=188;BQB=0.939086;DP=2733;DP4=1256,1415,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02904e-05;MQSB=0.992727;RPB=0.652953;SGB=30.8063;VDB=0.0173415;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.1:34091323 chr01:034091323 0 W/34091323-34091323 FN3687-S SNP C -> A AC=2;AN=190;BQB=0.916139;DP=2673;DP4=1281,1275,14,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63177e-17;MQSB=0.953395;RPB=0.046028;SGB=149.281;VDB=0.304523;EFF=UTR_3_PRIME(MODIFIER||242||525|LOC_Os01g58970|protein_coding|CODING|LOC_Os01g58970.1|1|1) FN2158-S.SNP.1:34101664 chr01:034101664 0 W/34101664-34101664 FN2158-S SNP G -> A AC=1;AN=168;BQB=6.77459e-06;DP=3972;DP4=2007,1880,7,28;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.20448e-06;MQSB=0.717844;RPB=0.211798;SGB=-481.147;VDB=0.432408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.1:34105562 chr01:034105562 0 W/34105562-34105562 FN1039-S Single Base Substitution A-G INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2768-S.SNP.1:34107272 chr01:034107272 0 W/34107272-34107272 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.805765;DP=4178;DP4=1980,1934,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20502e-05;MQSB=0.998171;RPB=0.275964;SGB=25.7687;VDB=0.512083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.1:34107346 chr01:034107346 0 W/34107346-34107346 FN2619-S SNP T -> A AC=1;AN=198;BQB=0.818443;DP=4434;DP4=2018,2170,23,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.84019e-23;MQSB=0.998381;RPB=0.845681;SGB=83.8419;VDB=0.13628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.1:34111842 chr01:034111842 0 W/34111842-34111842 FN2740-S SNP A -> C AC=1;AN=200;BQB=0.999938;DP=4355;DP4=1882,2070,14,13;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0158439;MQB=0.00796027;MQSB=0.496961;RPB=0.377837;SGB=23.9365;VDB=0.659727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.1:34112172 chr01:034112172 0 W/34112172-34112172 FN3851-S SNP G -> A AC=2;AN=158;BQB=0.992117;DP=1480;DP4=224,1144,6,15;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0277027;MQB=0.751775;MQSB=0.000167479;RPB=0.73972;SGB=86.3921;VDB=0.0775486;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.1:34114152 chr01:034114152 0 W/34114152-34114152 FN4272-S SNP C -> T AC=2;AN=170;BQB=0.961513;DP=2492;DP4=1184,1182,31,30;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.80267e-35;MQSB=0.991257;RPB=0.782169;SGB=260.13;VDB=0.341592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A142V|196|LOC_Os01g59009|protein_coding|CODING|LOC_Os01g59009.1|2|1) FN3993-S.SNP.1:34114647 chr01:034114647 0 W/34114647-34114647 FN3993-S SNP T -> C AC=1;AN=168;BQB=0.98903;DP=2313;DP4=987,1065,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44974e-09;MQSB=0.251062;RPB=0.606119;SGB=-15.3725;VDB=0.0854938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.1:34119152 chr01:034119152 0 W/34119152-34119152 FN1692-S SNP C -> G AC=2;AN=188;BQB=0.0139282;DP=2613;DP4=861,1710,13,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.7219e-13;MQSB=0.969058;RPB=0.822558;SGB=-41.0182;VDB=0.95353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.1:34120594 chr01:034120594 0 W/34120594-34120594 FN2597-S SNP A -> G AC=1;AN=198;BQB=0.27378;DP=4222;DP4=2041,1961,17,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.72319e-17;MQSB=0.94877;RPB=0.749528;SGB=31.6811;VDB=0.0038155;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.1:34123016 chr01:034123016 0 W/34123016-34123016 FN467-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g59040 expressed protein SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN439-S.SNP.1:34127679 chr01:034127679 0 W/34127679-34127679 FN439-S Single Base Substitution C-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN581-S.SNP.1:34127684 chr01:034127684 0 W/34127684-34127684 FN581-S Single Base Substitution T-A INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN971-S.SNP.1:34128264 chr01:034128264 0 W/34128264-34128264 FN971-S Single Base Substitution C-T INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3354-S.SNP.1:34131635 chr01:034131635 0 W/34131635-34131635 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.43541;DP=3498;DP4=1477,1867,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08131e-05;MQSB=0.485469;RPB=0.642543;SGB=66.8296;VDB=0.112371;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.1:34137040 chr01:034137040 0 W/34137040-34137040 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.911832;DP=3094;DP4=1287,1730,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.84727e-08;MQSB=0.713426;RPB=0.757857;SGB=67.1521;VDB=0.0262629;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A391|454|LOC_Os01g59070|protein_coding|CODING|LOC_Os01g59070.1|1|1) FN-157.SNP.1:34141808 chr01:034141808 0 W/34141808-34141808 FN-157 Single Base Substitution G-T UTR_5_PRIME HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN3725-S.SNP.1:34144454 chr01:034144454 0 W/34144454-34144454 FN3725-S SNP C -> T AC=2;AN=190;BQB=0.811292;DP=3024;DP4=1489,1412,17,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.40431e-18;MQSB=0.972508;RPB=0.996406;SGB=39.8503;VDB=0.276949;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A293|470|LOC_Os01g59100|protein_coding|CODING|LOC_Os01g59100.1|2|1) FN1709-S.SNP.1:34149424 chr01:034149424 0 W/34149424-34149424 FN1709-S SNP C -> T AC=2;AN=188;BQB=0.0835354;DP=3727;DP4=1690,1976,20,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.92244e-19;MQSB=0.998989;RPB=0.914233;SGB=-96.8634;VDB=0.696366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.1:34161355 chr01:034161355 0 W/34161355-34161355 FN2621-S SNP A -> G AC=1;AN=200;BQB=0.744582;DP=4731;DP4=2262,2258,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09339e-13;MQSB=0.983242;RPB=0.577655;SGB=91.1059;VDB=0.371128;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.1:34161355 chr01:034161355 0 W/34161355-34161355 FN3282-S SNP A -> G AC=2;AN=184;BQB=0.924683;DP=2840;DP4=1323,1408,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.89069e-17;MQSB=0.998109;RPB=0.813093;SGB=130.135;VDB=0.552008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.1:34161355 chr01:034161355 0 W/34161355-34161355 FN3982-S SNP A -> G AC=1;AN=168;BQB=0.999601;DP=2422;DP4=1168,1139,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.82641e-07;MQSB=0.814301;RPB=0.994797;SGB=34.748;VDB=0.613531;EFF=INTERGENIC(MODIFIER||||||||||1) W475-4-2.SNP.1:34161355 chr01:034161355 0 W/34161355-34161355 W475-4-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN4150-S.SNP.1:34174715 chr01:034174715 0 W/34174715-34174715 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.96363;DP=2459;DP4=1282,1098,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.38267e-08;MQSB=0.977453;RPB=0.997863;SGB=70.0854;VDB=0.845711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.1:34176554 chr01:034176554 0 W/34176554-34176554 FN3833-S SNP T -> A AC=1;AN=190;BQB=0.953515;DP=2618;DP4=1177,1356,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.87668e-07;MQSB=0.88591;RPB=0.766732;SGB=39.9877;VDB=0.372756;EFF=INTRON(MODIFIER||||289|LOC_Os01g59160|protein_coding|CODING|LOC_Os01g59160.1|7|1) FN1759-S.SNP.1:34189988 chr01:034189988 0 W/34189988-34189988 FN1759-S SNP A -> C AC=2;AN=188;BQB=0.925824;DP=2370;DP4=1180,1150,9,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.56527e-07;MQSB=0.0746144;RPB=0.813999;SGB=10.1681;VDB=0.460657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.1:34192059 chr01:034192059 0 W/34192059-34192059 FN3785-S SNP G -> T AC=1;AN=190;BQB=0.661484;DP=3667;DP4=1794,1754,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.42775e-10;MQSB=0.578658;RPB=0.986845;SGB=50.3161;VDB=0.219632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.1:34192060 chr01:034192060 0 W/34192060-34192060 FN3785-S SNP G -> T AC=1;AN=190;BQB=0.991808;DP=3654;DP4=1793,1738,2,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.67105e-10;MQSB=0.500067;RPB=0.972726;SGB=62.7569;VDB=0.421428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.1:34204098 chr01:034204098 0 W/34204098-34204098 FN2081-S SNP T -> A AC=1;AN=168;BQB=0.0313853;DP=2577;DP4=908,1634,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.95378e-06;MQSB=0.926904;RPB=0.527948;SGB=-61.7914;VDB=0.476625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.1:34204876 chr01:034204876 0 W/34204876-34204876 FN2126-S SNP T -> A AC=1;AN=168;BQB=0.517625;DP=2750;DP4=1353,1351,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0181818;MQB=4.56759e-08;MQSB=3.35301e-06;RPB=0.598575;SGB=39.2004;VDB=0.587906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.1:34205232 chr01:034205232 0 W/34205232-34205232 FN3396-S SNP T -> A AC=1;AN=184;BQB=0.92002;DP=2821;DP4=1175,1492,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00779865;MQB=8.19588e-09;MQSB=0.894465;RPB=0.606732;SGB=71.3514;VDB=0.759664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.1:34205579 chr01:034205579 0 W/34205579-34205579 FN1586-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os01g59210 retrotransposon protein, putative, unclassified SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2192-S.SNP.1:34205579 chr01:034205579 0 W/34205579-34205579 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.921454;DP=5043;DP4=2455,2226,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000396589;MQB=4.73668e-08;MQSB=0.309669;RPB=0.807975;SGB=82.301;VDB=0.775099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K115M|196|LOC_Os01g59210|protein_coding|CODING|LOC_Os01g59210.1|1|1) FN1278-S.SNP.1:34209005 chr01:034209005 0 W/34209005-34209005 FN1278-S Single Base Substitution T-A INTRON HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1278-S.SNP.1:34209006 chr01:034209006 0 W/34209006-34209006 FN1278-S Single Base Substitution T-A INTRON HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN753-S.SNP.1:34212128 chr01:034212128 0 W/34212128-34212128 FN753-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g59220 retrotransposon protein, putative, unclassified, expressed SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN3677-S.SNP.1:34223208 chr01:034223208 0 W/34223208-34223208 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.874485;DP=2741;DP4=1155,1432,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70119e-11;MQSB=0.984383;RPB=0.798555;SGB=53.8699;VDB=0.249372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.1:34223613 chr01:034223613 0 W/34223613-34223613 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.999132;DP=3420;DP4=1605,1668,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20357e-14;MQSB=0.993112;RPB=0.755797;SGB=85.8548;VDB=0.517881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.1:34225215 chr01:034225215 0 W/34225215-34225215 FN1256-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN498-S.SNP.1:34225676 chr01:034225676 0 W/34225676-34225676 FN498-S Single Base Substitution G-A INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN-234.SNP.1:34226345 chr01:034226345 0 W/34226345-34226345 FN-234 Single Base Substitution C-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-344.SNP.1:34231096 chr01:034231096 0 W/34231096-34231096 FN-344 Single Base Substitution A-G INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-306.SNP.1:34231321 chr01:034231321 0 W/34231321-34231321 FN-306 Single Base Substitution A-G INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1113-S.SNP.1:34231366 chr01:034231366 0 W/34231366-34231366 FN1113-S Single Base Substitution G-C INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2751-S.SNP.1:34232382 chr01:034232382 0 W/34232382-34232382 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.845131;DP=4599;DP4=2135,2253,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65147e-06;MQSB=0.921;RPB=0.568072;SGB=22.2439;VDB=0.0538244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1606C|1723|LOC_Os01g59230|protein_coding|CODING|LOC_Os01g59230.1|13|1) FN2756-S.SNP.1:34236329 chr01:034236329 0 W/34236329-34236329 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.0959989;DP=4742;DP4=2394,2104,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210881;MQB=4.77698e-14;MQSB=0.763167;RPB=0.711548;SGB=19.1209;VDB=0.425957;EFF=INTRON(MODIFIER||||1723|LOC_Os01g59230|protein_coding|CODING|LOC_Os01g59230.1|10|1) FN427-S.SNP.1:34237930 chr01:034237930 0 W/34237930-34237930 FN427-S Single Base Substitution C-A INTRON HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2683-S.SNP.1:34253664 chr01:034253664 0 W/34253664-34253664 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.412633;DP=3275;DP4=1452,1610,9,7;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.181679;MQB=0.914338;MQSB=0;RPB=0.996343;SGB=68.0801;VDB=0.698795;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.1:34256216 chr01:034256216 0 W/34256216-34256216 FN321-S Single Base Substitution A-T INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2648-S.SNP.1:34260188 chr01:034260188 0 W/34260188-34260188 FN2648-S SNP T -> C AC=1;AN=200;BQB=0.998702;DP=5092;DP4=2371,2460,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94769e-08;MQSB=0.673399;RPB=0.98549;SGB=58.2954;VDB=0.774605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.1:34265895 chr01:034265895 0 W/34265895-34265895 FN3885-S SNP G -> A AC=1;AN=158;BQB=0.794563;DP=1606;DP4=466,1028,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=2.67192e-05;MQSB=4.06153e-16;RPB=0.992593;SGB=51.4366;VDB=0.974437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.1:34268896 chr01:034268896 0 W/34268896-34268896 FN2535-S SNP C -> T AC=1;AN=190;BQB=0.980644;DP=3617;DP4=1841,1509,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00221178;MQB=1.83826e-07;MQSB=0.00025297;RPB=0.900526;SGB=77.1196;VDB=0.0716126;EFF=INTRON(MODIFIER||||317|LOC_Os01g59280|protein_coding|CODING|LOC_Os01g59280.1|1|1) FN3365-S.SNP.1:34270649 chr01:034270649 0 W/34270649-34270649 FN3365-S SNP G -> T AC=2;AN=184;BQB=0.929902;DP=3615;DP4=1320,2125,13,17;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.104011;MQB=0.916526;MQSB=0;RPB=0.586249;SGB=130.135;VDB=0.384319;EFF=INTRON(MODIFIER||||317|LOC_Os01g59280|protein_coding|CODING|LOC_Os01g59280.1|1|1) FN3787-S.SNP.1:34279445 chr01:034279445 0 W/34279445-34279445 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.948314;DP=2776;DP4=1285,1356,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21173e-13;MQSB=0.985885;RPB=0.066867;SGB=78.7471;VDB=0.66357;EFF=INTRON(MODIFIER||||181|LOC_Os01g59300|protein_coding|CODING|LOC_Os01g59300.1|1|1) FN579-S.SNP.1:34284916 chr01:034284916 0 W/34284916-34284916 FN579-S Single Base Substitution C-T INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN-66.SNP.1:34288142 chr01:034288142 0 W/34288142-34288142 FN-66 Single Base Substitution A-C INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2780-S.SNP.1:34290017 chr01:034290017 0 W/34290017-34290017 FN2780-S SNP T -> C AC=2;AN=186;BQB=0.713185;DP=3955;DP4=2135,1537,25,22;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=6.676e-22;MQSB=0.984338;RPB=0.997373;SGB=107.198;VDB=0.777051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:34292685 chr01:034292685 0 W/34292685-34292685 FN2235-S SNP C -> T AC=1;AN=190;BQB=0.982042;DP=3877;DP4=1881,1771,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73251e-06;MQSB=0.406479;RPB=0.244858;SGB=43.2083;VDB=0.241276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.1:34293775 chr01:034293775 0 W/34293775-34293775 FN3756-S SNP G -> A AC=1;AN=190;BQB=0.430581;DP=3217;DP4=1718,1408,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.8356e-05;MQSB=0.674684;RPB=0.86262;SGB=32.5467;VDB=0.328773;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L44|167|LOC_Os01g59320|protein_coding|CODING|LOC_Os01g59320.1|4|1) FN3997-S.SNP.1:34305972 chr01:034305972 0 W/34305972-34305972 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.751202;DP=2128;DP4=420,1458,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000339085;MQSB=0.0251311;RPB=0.942741;SGB=7.59999;VDB=0.133454;EFF=UTR_3_PRIME(MODIFIER||178||539|LOC_Os01g59340|protein_coding|CODING|LOC_Os01g59340.1|16|1),UTR_3_PRIME(MODIFIER||178||511|LOC_Os01g59340|protein_coding|CODING|LOC_Os01g59340.2|16|1),INTRON(MODIFIER||||539|LOC_Os01g59340|protein_coding|CODING|LOC_Os01g59340.3|16|1) FN3779-S.SNP.1:34309199 chr01:034309199 0 W/34309199-34309199 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.98605;DP=2547;DP4=1304,1138,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.93598e-19;MQSB=0.997064;RPB=0.995814;SGB=107.178;VDB=0.403364;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P358|364|LOC_Os01g59350|protein_coding|CODING|LOC_Os01g59350.2|9|1),INTRON(MODIFIER||||472|LOC_Os01g59350|protein_coding|CODING|LOC_Os01g59350.1|9|1) FN-246.SNP.1:34311629 chr01:034311629 0 W/34311629-34311629 FN-246 Single Base Substitution A-G INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-246.SNP.1:34311638 chr01:034311638 0 W/34311638-34311638 FN-246 Single Base Substitution G-A INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN1265-S.SNP.1:34311847 chr01:034311847 0 W/34311847-34311847 FN1265-S Single Base Substitution T-G INTRON HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3629-S.SNP.1:34312444 chr01:034312444 0 W/34312444-34312444 FN3629-S SNP C -> G AC=1;AN=190;BQB=0.999951;DP=2622;DP4=1123,1395,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.86942e-12;MQSB=0.731698;RPB=0.618917;SGB=80.9724;VDB=0.802913;EFF=INTRON(MODIFIER||||472|LOC_Os01g59350|protein_coding|CODING|LOC_Os01g59350.1|1|1),INTRON(MODIFIER||||364|LOC_Os01g59350|protein_coding|CODING|LOC_Os01g59350.2|1|1) FN998-S.SNP.1:34315382 chr01:034315382 0 W/34315382-34315382 FN998-S Single Base Substitution C-A INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3756-S.SNP.1:34334656 chr01:034334656 0 W/34334656-34334656 FN3756-S SNP T -> C AC=1;AN=190;BQB=0.972295;DP=2441;DP4=1210,997,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.13277e-07;MQSB=0.991635;RPB=0.974884;SGB=39.6545;VDB=0.485292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.1:34335478 chr01:034335478 0 W/34335478-34335478 FN1494-S Single Base Substitution C-A INTERGENIC Homo SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1494-S.SNP.1:34335479 chr01:034335479 0 W/34335479-34335479 FN1494-S Single Base Substitution C-A INTERGENIC Homo SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3822-S.SNP.1:34342141 chr01:034342141 0 W/34342141-34342141 FN3822-S SNP G -> A AC=1;AN=190;BQB=0.978664;DP=5739;DP4=2961,2620,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0411221;MQB=0.746136;MQSB=0;RPB=0.385289;SGB=76.4186;VDB=0.638457;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.1:34354480 chr01:034354480 0 W/34354480-34354480 FN756-S Single Base Substitution C-T INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN756-S.SNP.1:34354481 chr01:034354481 0 W/34354481-34354481 FN756-S Single Base Substitution C-G INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2316.SNP.1:34366074 chr01:034366074 0 W/34366074-34366074 FN2316 SNP C -> T AC=2;AN=192;BQB=0.718188;DP=4864;DP4=2290,2213,20,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.24437e-19;MQSB=0.690777;RPB=0.551027;SGB=90.4583;VDB=0.611329;EFF=START_GAINED(LOW||||176|LOC_Os01g59420|protein_coding|CODING|LOC_Os01g59420.1|1|1),UTR_5_PRIME(MODIFIER||589||176|LOC_Os01g59420|protein_coding|CODING|LOC_Os01g59420.1|1|1) FN2304.SNP.1:34373943 chr01:034373943 0 W/34373943-34373943 FN2304 SNP A -> G AC=2;AN=192;BQB=0.812861;DP=4604;DP4=2254,2072,32,41;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.00477e-39;MQSB=0.835006;RPB=0.983062;SGB=239.972;VDB=0.362795;EFF=INTERGENIC(MODIFIER||||||||||1) FN-197.SNP.1:34377373 chr01:034377373 0 W/34377373-34377373 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2370.SNP.1:34380433 chr01:034380433 0 W/34380433-34380433 FN2370 SNP T -> C AC=1;AN=192;BQB=0.73286;DP=5402;DP4=2558,2611,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.76079e-15;MQSB=0.999975;RPB=0.5122;SGB=78.9878;VDB=0.612738;EFF=INTRON(MODIFIER||||213|LOC_Os01g59440|protein_coding|CODING|LOC_Os01g59440.1|2|1),INTRON(MODIFIER||||191|LOC_Os01g59440|protein_coding|CODING|LOC_Os01g59440.2|2|1),INTRON(MODIFIER||||166|LOC_Os01g59440|protein_coding|CODING|LOC_Os01g59440.3|1|1) FN1007-S.SNP.1:34383224 chr01:034383224 0 W/34383224-34383224 FN1007-S Single Base Substitution A-T INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN1641-S.SNP.1:34383495 chr01:034383495 0 W/34383495-34383495 FN1641-S Single Base Substitution G-A INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN-90.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN-90 Single Base Substitution C-T INTERGENIC HOMO SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1213-S.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN1213-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1310-S.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN1310-S Single Base Substitution C-T INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2404.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN2404 SNP C -> T AC=1;AN=200;BQB=0.833847;DP=4290;DP4=1983,2064,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.05862e-16;MQSB=0.922406;RPB=0.893517;SGB=90.7419;VDB=0.216234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.952483;DP=4601;DP4=2217,2149,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.71156e-14;MQSB=0.999677;RPB=0.965904;SGB=52.9314;VDB=0.161206;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.1:34392738 chr01:034392738 0 W/34392738-34392738 FN888-S Single Base Substitution C-T INTERGENIC HOMO SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1641-S.SNP.1:34394491 chr01:034394491 0 W/34394491-34394491 FN1641-S Single Base Substitution C-T INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN-180.SNP.1:34398082 chr01:034398082 0 W/34398082-34398082 FN-180 Single Base Substitution A-G INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3577-S.SNP.1:34398082 chr01:034398082 0 W/34398082-34398082 FN3577-S SNP A -> G AC=1;AN=188;BQB=0.999022;DP=2865;DP4=1285,1501,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.13602e-08;MQSB=0.999543;RPB=0.647738;SGB=39.5276;VDB=0.656766;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.1:34398082 chr01:034398082 0 W/34398082-34398082 FN3899-S SNP A -> G AC=2;AN=158;BQB=0.967812;DP=2425;DP4=1048,1279,6,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.64893e-09;MQSB=0.987886;RPB=0.311845;SGB=50.9207;VDB=0.374356;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.1:34410174 chr01:034410174 0 W/34410174-34410174 FN543-S Single Base Substitution A-G INTRON HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3992-S.SNP.1:34411044 chr01:034411044 0 W/34411044-34411044 FN3992-S SNP T -> C AC=1;AN=168;BQB=0.40273;DP=2494;DP4=1114,1286,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.36444e-08;MQSB=0.984643;RPB=0.889513;SGB=29.4772;VDB=0.569609;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E143|227|LOC_Os01g59500|protein_coding|CODING|LOC_Os01g59500.1|6|1|WARNING_TRANSCRIPT_INCOMPLETE),SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E143|229|LOC_Os01g59500|protein_coding|CODING|LOC_Os01g59500.2|6|1) FN3768-S.SNP.1:34422526 chr01:034422526 0 W/34422526-34422526 FN3768-S SNP G -> A AC=1;AN=190;BQB=0.681964;DP=3302;DP4=1410,1720,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.51785e-13;MQSB=0.870576;RPB=0.979295;SGB=82.301;VDB=0.970111;EFF=INTRON(MODIFIER||||187|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.1|1|1),INTRON(MODIFIER||||149|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.2|1|1) FN3567-S.SNP.1:34423037 chr01:034423037 0 W/34423037-34423037 FN3567-S SNP A -> G AC=1;AN=188;BQB=0.967947;DP=3205;DP4=1544,1515,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.34266e-12;MQSB=0.989224;RPB=0.976885;SGB=60.7873;VDB=0.349247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N112S|187|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N112S|149|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.2|2|1) FN3567-S.SNP.1:34423038 chr01:034423038 0 W/34423038-34423038 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.93471;DP=3217;DP4=1572,1569,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03521e-12;MQSB=0.962655;RPB=0.870346;SGB=80.782;VDB=0.205665;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N112|187|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N112|149|LOC_Os01g59530|protein_coding|CODING|LOC_Os01g59530.2|2|1) FN474-S.SNP.1:34425837 chr01:034425837 0 W/34425837-34425837 FN474-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g59540 GRF zinc finger family protein SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN-13.SNP.1:34432688 chr01:034432688 0 W/34432688-34432688 FN-13 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g59550 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN_786-4-1.SNP.1:34447895 chr01:034447895 0 W/34447895-34447895 FN_786-4-1 Single Base Substitution G-A Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3356-S.SNP.1:34448922 chr01:034448922 0 W/34448922-34448922 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.433729;DP=2742;DP4=1231,1386,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000681689;MQSB=0.988501;RPB=0.951039;SGB=21.6609;VDB=0.290164;EFF=INTRON(MODIFIER||||937|LOC_Os01g59570|protein_coding|CODING|LOC_Os01g59570.1|10|1) FN3858-S.SNP.1:34456046 chr01:034456046 0 W/34456046-34456046 FN3858-S SNP G -> C AC=1;AN=158;BQB=0.763071;DP=2585;DP4=1352,1132,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=6.84819e-05;MQSB=0.611704;RPB=0.687248;SGB=30.704;VDB=0.24747;EFF=INTERGENIC(MODIFIER||||||||||1) FN936-S.SNP.1:34457327 chr01:034457327 0 W/34457327-34457327 FN936-S Single Base Substitution T-G INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2091-S.SNP.1:34457652 chr01:034457652 0 W/34457652-34457652 FN2091-S SNP C -> A AC=1;AN=168;BQB=0.788591;DP=3901;DP4=2301,1538,25,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.43418e-21;MQSB=0.887495;RPB=0.676379;SGB=-260.003;VDB=0.421627;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.1:34463662 chr01:034463662 0 W/34463662-34463662 FN4136-S SNP G -> C AC=1;AN=170;BQB=0.857734;DP=2499;DP4=1245,1174,3,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.17213e-06;MQSB=0.780223;RPB=0.915031;SGB=56.7575;VDB=0.263262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A275G|915|LOC_Os01g59580|protein_coding|CODING|LOC_Os01g59580.1|3|1) FN4305-S.SNP.1:34464890 chr01:034464890 0 W/34464890-34464890 FN4305-S SNP A -> G AC=1;AN=170;BQB=0.983249;DP=2870;DP4=1497,1287,11,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.60768e-15;MQSB=0.998077;RPB=0.962412;SGB=41.8678;VDB=0.63123;EFF=INTRON(MODIFIER||||915|LOC_Os01g59580|protein_coding|CODING|LOC_Os01g59580.1|1|1) FN3486-S.SNP.1:34470944 chr01:034470944 0 W/34470944-34470944 FN3486-S SNP G -> A AC=2;AN=184;BQB=0.655023;DP=3229;DP4=1257,1821,25,30;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.29186e-24;MQSB=0.883043;RPB=0.802289;SGB=141.668;VDB=0.684196;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.1:34474204 chr01:034474204 0 W/34474204-34474204 FN666-S Single Base Substitution T-G INTRON HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2612-S.SNP.1:34478801 chr01:034478801 0 W/34478801-34478801 FN2612-S SNP T -> C AC=2;AN=198;BQB=0.747701;DP=4442;DP4=2032,2169,30,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.52692e-26;MQSB=0.811519;RPB=0.396429;SGB=117.578;VDB=0.00245861;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.1:34483389 chr01:034483389 0 W/34483389-34483389 FN1610-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g59620 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN873-S.SNP.1:34489528 chr01:034489528 0 W/34489528-34489528 FN873-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3567-S.SNP.1:34496373 chr01:034496373 0 W/34496373-34496373 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.955329;DP=2368;DP4=1019,1281,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.44218e-05;MQSB=0.917081;RPB=0.990158;SGB=26.2637;VDB=0.219617;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.1:34497616 chr01:034497616 0 W/34497616-34497616 FN995-S Single Base Substitution G-A INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1736-S.SNP.1:34506450 chr01:034506450 0 W/34506450-34506450 FN1736-S SNP G -> T AC=1;AN=188;BQB=0.835508;DP=3214;DP4=975,2195,3,28;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.99235e-14;MQSB=0.983956;RPB=0.368315;SGB=-113.464;VDB=0.462687;EFF=INTERGENIC(MODIFIER||||||||||1) 704-1-1.SNP.1:34508949 chr01:034508949 0 W/34508949-34508949 704-1-1 Single Base Substitution A-T INTRON Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN1508-S.SNP.1:34517435 chr01:034517435 0 W/34517435-34517435 FN1508-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3529-S.SNP.1:34529778 chr01:034529778 0 W/34529778-34529778 FN3529-S SNP T -> C AC=1;AN=188;BQB=0.875781;DP=2905;DP4=1402,1404,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.32624e-08;MQSB=0.999996;RPB=0.995662;SGB=53.5223;VDB=0.325636;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.1:34530187 chr01:034530187 0 W/34530187-34530187 W247-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN521-S.SNP.1:34539711 chr01:034539711 0 W/34539711-34539711 FN521-S Single Base Substitution T-C INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN1103-S.SNP.1:34545523 chr01:034545523 0 W/34545523-34545523 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN403-S.SNP.1:34546393 chr01:034546393 0 W/34546393-34546393 FN403-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g59710 expressed protein SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1230-S.SNP.1:34548031 chr01:034548031 0 W/34548031-34548031 FN1230-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2734-S.SNP.1:34557049 chr01:034557049 0 W/34557049-34557049 FN2734-S SNP T -> A AC=1;AN=200;BQB=0.971041;DP=4976;DP4=2277,2510,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.50855e-14;MQSB=0.768183;RPB=0.668104;SGB=19.1209;VDB=0.626441;EFF=INTERGENIC(MODIFIER||||||||||1) FN492-S.SNP.1:34557049 chr01:034557049 0 W/34557049-34557049 FN492-S Single Base Substitution T-A INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-145.SNP.1:34579444 chr01:034579444 0 W/34579444-34579444 FN-145 Single Base Substitution G-A INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-145.SNP.1:34579445 chr01:034579445 0 W/34579445-34579445 FN-145 Single Base Substitution C-T INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1640-S.SNP.1:34579994 chr01:034579994 0 W/34579994-34579994 FN1640-S Single Base Substitution C-T INTERGENIC Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN976-S.SNP.1:34579994 chr01:034579994 0 W/34579994-34579994 FN976-S Single Base Substitution C-T INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN2392.SNP.1:34585996 chr01:034585996 0 W/34585996-34585996 FN2392 SNP A -> G AC=1;AN=200;BQB=0.685488;DP=4751;DP4=2483,2033,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.29529e-12;MQSB=0.982909;RPB=0.978994;SGB=79.9264;VDB=0.593057;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H284|294|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.3|2|1),INTRON(MODIFIER||||447|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.1|2|1),INTRON(MODIFIER||||333|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.2|2|1) FN2279-S.SNP.1:34586345 chr01:034586345 0 W/34586345-34586345 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.990388;DP=4581;DP4=2042,2268,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94322e-10;MQSB=0.68775;RPB=0.524493;SGB=57.4238;VDB=0.400145;EFF=INTRON(MODIFIER||||447|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.1|1|1),INTRON(MODIFIER||||333|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.2|1|1),INTRON(MODIFIER||||294|LOC_Os01g59800|protein_coding|CODING|LOC_Os01g59800.3|1|1) FN1150-S.SNP.1:34587224 chr01:034587224 0 W/34587224-34587224 FN1150-S Single Base Substitution G-A INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1617-S.SNP.1:34587426 chr01:034587426 0 W/34587426-34587426 FN1617-S Single Base Substitution C-T INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3547-S.SNP.1:34590574 chr01:034590574 0 W/34590574-34590574 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.948288;DP=3140;DP4=1538,1492,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.164968;MQB=0.461612;MQSB=2.84385e-30;RPB=0.932748;SGB=39.8925;VDB=0.379326;EFF=INTRON(MODIFIER||||500|LOC_Os01g59819|protein_coding|CODING|LOC_Os01g59819.1|11|1) FN1035-S.SNP.1:34596593 chr01:034596593 0 W/34596593-34596593 FN1035-S Single Base Substitution A-G INTRON HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-189.SNP.1:34598488 chr01:034598488 0 W/34598488-34598488 FN-189 Single Base Substitution A-G INTRON HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-150.SNP.1:34600620 chr01:034600620 0 W/34600620-34600620 FN-150 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN-172.SNP.1:34602708 chr01:034602708 0 W/34602708-34602708 FN-172 Single Base Substitution G-A INTERGENIC HOMO SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN807-S.SNP.1:34606895 chr01:034606895 0 W/34606895-34606895 FN807-S Single Base Substitution G-A INTRON HOMO SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2232-S.SNP.1:34610465 chr01:034610465 0 W/34610465-34610465 FN2232-S SNP C -> T AC=1;AN=190;BQB=0.801208;DP=5145;DP4=2360,2329,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00292e-13;MQSB=0.326707;RPB=0.874983;SGB=78.7471;VDB=0.222814;EFF=INTRON(MODIFIER||||514|LOC_Os01g59840|protein_coding|CODING|LOC_Os01g59840.1|2|1) FN3678-S.SNP.1:34611762 chr01:034611762 0 W/34611762-34611762 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.983849;DP=2076;DP4=1097,904,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.75941e-05;MQSB=0.933687;RPB=0.952668;SGB=21.8853;VDB=0.351304;EFF=INTERGENIC(MODIFIER||||||||||1) FN4017-S.SNP.1:34624563 chr01:034624563 0 W/34624563-34624563 FN4017-S SNP T -> C AC=1;AN=168;BQB=0.566587;DP=2178;DP4=800,1189,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00181247;MQSB=0.13271;RPB=0.404012;SGB=-0.101747;VDB=0.731915;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.1:34624852 chr01:034624852 0 W/34624852-34624852 FN1721-S SNP T -> C AC=1;AN=188;BQB=0.00295048;DP=3192;DP4=1390,1752,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000158646;MQSB=0.375098;RPB=0.530944;SGB=20.9711;VDB=0.927948;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.1:34637602 chr01:034637602 0 W/34637602-34637602 FN488-S Single Base Substitution G-A INTRON HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2580-S.SNP.1:34642810 chr01:034642810 0 W/34642810-34642810 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.206972;DP=3519;DP4=1792,1567,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.70606e-09;MQSB=0.949609;RPB=0.828458;SGB=31.9395;VDB=0.83707;EFF=UTR_5_PRIME(MODIFIER||1231||374|LOC_Os01g59900|protein_coding|CODING|LOC_Os01g59900.1|1|1) FN2580-S.SNP.1:34642811 chr01:034642811 0 W/34642811-34642811 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.835552;DP=3507;DP4=1779,1552,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.99146e-09;MQSB=0.961148;RPB=0.905937;SGB=67.9293;VDB=0.867437;EFF=UTR_5_PRIME(MODIFIER||1232||374|LOC_Os01g59900|protein_coding|CODING|LOC_Os01g59900.1|1|1) FN-325.SNP.1:34649017 chr01:034649017 0 W/34649017-34649017 FN-325 Single Base Substitution A-T INTRON HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1273-S.SNP.1:34655731 chr01:034655731 0 W/34655731-34655731 FN1273-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN887-S.SNP.1:34661457 chr01:034661457 0 W/34661457-34661457 FN887-S Single Base Substitution G-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN1521-S.SNP.1:34678425 chr01:034678425 0 W/34678425-34678425 FN1521-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g59980 zinc finger family protein, putative, expressed SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3366-S.SNP.1:34680010 chr01:034680010 0 W/34680010-34680010 FN3366-S SNP C -> T AC=2;AN=184;BQB=0.964766;DP=3089;DP4=1469,1519,21,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.66852e-19;MQSB=0.898364;RPB=0.39795;SGB=113.227;VDB=0.0110926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S304L|950|LOC_Os01g59980|protein_coding|CODING|LOC_Os01g59980.1|4|1) FN1582-S.SNP.1:34685373 chr01:034685373 0 W/34685373-34685373 FN1582-S Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3691-S.SNP.1:34687136 chr01:034687136 0 W/34687136-34687136 FN3691-S SNP C -> A AC=1;AN=190;BQB=0.410275;DP=3196;DP4=1671,1428,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.76626e-06;MQSB=0.999338;RPB=0.997929;SGB=39.9877;VDB=0.543076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D636Y|1031|LOC_Os01g60000|protein_coding|CODING|LOC_Os01g60000.1|2|1) FN4255-S.SNP.1:34696272 chr01:034696272 0 W/34696272-34696272 FN4255-S SNP C -> T AC=1;AN=170;BQB=0.898904;DP=2775;DP4=1304,1376,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.63335e-10;MQSB=0.846287;RPB=0.997653;SGB=61.2001;VDB=0.842681;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.1:34700206 chr01:034700206 0 W/34700206-34700206 FN-144 Single Base Substitution G-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3364-S.SNP.1:34740550 chr01:034740550 0 W/34740550-34740550 FN3364-S SNP C -> G AC=1;AN=184;BQB=0.868392;DP=2775;DP4=1333,1343,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.44638e-12;MQSB=0.986062;RPB=0.989268;SGB=56.8786;VDB=0.341354;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P171R|926|LOC_Os01g60060|protein_coding|CODING|LOC_Os01g60060.1|8|1) FN2589-S.SNP.1:34742298 chr01:034742298 0 W/34742298-34742298 FN2589-S SNP C -> A AC=1;AN=198;BQB=0.621266;DP=4275;DP4=2139,1931,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.47167e-09;MQSB=0.902306;RPB=0.977928;SGB=67.9293;VDB=0.474717;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L530|926|LOC_Os01g60060|protein_coding|CODING|LOC_Os01g60060.1|16|1) FN3310-S.SNP.1:34743488 chr01:034743488 0 W/34743488-34743488 FN3310-S SNP T -> A AC=1;AN=184;BQB=0.845687;DP=2689;DP4=1341,1246,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.61321e-08;MQSB=0.955062;RPB=0.822299;SGB=39.2697;VDB=0.5863;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y800N|926|LOC_Os01g60060|protein_coding|CODING|LOC_Os01g60060.1|20|1) FN3829-S.SNP.1:34768786 chr01:034768786 0 W/34768786-34768786 FN3829-S SNP T -> A AC=1;AN=190;BQB=0.99998;DP=3183;DP4=1792,1256,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.64614e-08;MQSB=0.913582;RPB=0.463722;SGB=21.1058;VDB=0.0899386;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.1:34771115 chr01:034771115 0 W/34771115-34771115 FN-392 Single Base Substitution C-T INTRON HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2266-S.SNP.1:34782550 chr01:034782550 0 W/34782550-34782550 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.911965;DP=4743;DP4=2318,2110,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77213e-11;MQSB=0.975115;RPB=0.572092;SGB=13.4344;VDB=0.193647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.1:34784068 chr01:034784068 0 W/34784068-34784068 FN3858-S SNP C -> T AC=2;AN=158;BQB=0.879524;DP=2395;DP4=1264,1034,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.4425e-12;MQSB=0.982447;RPB=0.897171;SGB=77.8763;VDB=0.279331;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.1:34784564 chr01:034784564 0 W/34784564-34784564 FN2373 SNP C -> A AC=1;AN=192;BQB=0.894665;DP=4656;DP4=2448,1929,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.84101e-17;MQSB=0.459997;RPB=0.915515;SGB=122.24;VDB=0.043103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.1:34790682 chr01:034790682 0 W/34790682-34790682 FN2438 SNP C -> T AC=2;AN=200;BQB=0.935365;DP=3284;DP4=1787,1292,31,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.80965e-23;MQSB=0.36257;RPB=0.941639;SGB=206.235;VDB=0.538785;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L633|875|LOC_Os01g60140|protein_coding|CODING|LOC_Os01g60140.1|4|1) FN976-S.SNP.1:34796817 chr01:034796817 0 W/34796817-34796817 FN976-S Single Base Substitution G-A INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1250-S.SNP.1:34797091 chr01:034797091 0 W/34797091-34797091 FN1250-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN3325-S.SNP.1:34800569 chr01:034800569 0 W/34800569-34800569 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.908417;DP=3006;DP4=1493,1407,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.39656e-10;MQSB=0.949218;RPB=0.775995;SGB=62.3078;VDB=0.292205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G38D|123|LOC_Os01g60160|protein_coding|CODING|LOC_Os01g60160.1|1|1) FN2619-S.SNP.1:34806914 chr01:034806914 0 W/34806914-34806914 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.892298;DP=4151;DP4=2072,1848,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000240906;MQB=1.91508e-14;MQSB=0.989146;RPB=0.924936;SGB=76.1002;VDB=0.708399;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V385I|559|LOC_Os01g60190|protein_coding|CODING|LOC_Os01g60190.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V385I|559|LOC_Os01g60190|protein_coding|CODING|LOC_Os01g60190.2|6|1) FN788-S.SNP.1:34815254 chr01:034815254 0 W/34815254-34815254 FN788-S Single Base Substitution C-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2281.SNP.1:34816665 chr01:034816665 0 W/34816665-34816665 FN2281 SNP G -> A AC=1;AN=192;BQB=0.960221;DP=5124;DP4=2422,2277,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.44725e-14;MQSB=0.99996;RPB=0.777545;SGB=-7.43215;VDB=0.530352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.1:34823932 chr01:034823932 0 W/34823932-34823932 FN2629-S SNP C -> G AC=1;AN=200;BQB=0.16356;DP=4212;DP4=2290,1627,10,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00332384;MQB=0.000127496;MQSB=0.939769;RPB=0.760529;SGB=54.2646;VDB=0.0278765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.1:34824219 chr01:034824219 0 W/34824219-34824219 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.998925;DP=1941;DP4=953,935,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0788253;MQB=0.480144;MQSB=1.51484e-10;RPB=0.850328;SGB=87.6193;VDB=0.586121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1937Q|2027|LOC_Os01g60220|protein_coding|CODING|LOC_Os01g60220.1|2|1) FN3756-S.SNP.1:34825676 chr01:034825676 0 W/34825676-34825676 FN3756-S SNP T -> A AC=1;AN=190;BQB=0.591605;DP=3110;DP4=1457,1523,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0665595;MQB=0.610997;MQSB=0.777895;RPB=0.71897;SGB=15.9981;VDB=0.213703;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A1451|2027|LOC_Os01g60220|protein_coding|CODING|LOC_Os01g60220.1|2|1) FN4046-S.SNP.1:34826695 chr01:034826695 0 W/34826695-34826695 FN4046-S SNP G -> C AC=1;AN=168;BQB=0.990099;DP=2828;DP4=1331,1404,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0152051;MQB=0.174966;MQSB=2.97685e-06;RPB=0.581714;SGB=83.1885;VDB=0.543357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Gct|P1112A|2027|LOC_Os01g60220|protein_coding|CODING|LOC_Os01g60220.1|2|1) FN2573-S.SNP.1:34833009 chr01:034833009 0 W/34833009-34833009 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.942572;DP=4194;DP4=2302,1688,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02464e-05;MQSB=0.780416;RPB=0.239176;SGB=49.5489;VDB=0.59634;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.1:34834641 chr01:034834641 0 W/34834641-34834641 FN2411 SNP T -> C AC=1;AN=200;BQB=0.982085;DP=4034;DP4=1873,1608,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.35853e-11;MQSB=0.316748;RPB=0.782542;SGB=17.5158;VDB=0.591907;EFF=UTR_5_PRIME(MODIFIER||787||432|LOC_Os01g60230|protein_coding|CODING|LOC_Os01g60230.4|1|1),UTR_5_PRIME(MODIFIER||787||432|LOC_Os01g60230|protein_coding|CODING|LOC_Os01g60230.1|1|1),UTR_5_PRIME(MODIFIER||787||432|LOC_Os01g60230|protein_coding|CODING|LOC_Os01g60230.3|1|1) FN4050-S.SNP.1:34846535 chr01:034846535 0 W/34846535-34846535 FN4050-S SNP T -> A AC=2;AN=168;BQB=0.376907;DP=1341;DP4=613,632,11,6;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000745712;MQB=7.55966e-07;MQSB=0.000129376;RPB=0.780964;SGB=69.8961;VDB=0.0130739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.1:34856725 chr01:034856725 0 W/34856725-34856725 FN1634-S Single Base Substitution A-T INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN4221-S.SNP.1:34858707 chr01:034858707 0 W/34858707-34858707 FN4221-S SNP G -> A AC=1;AN=170;BQB=0.810121;DP=1693;DP4=844,771,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.71591e-06;MQSB=0.759874;RPB=0.779367;SGB=38.987;VDB=0.109535;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.1:34864273 chr01:034864273 0 W/34864273-34864273 FN672-S Single Base Substitution A-G INTRON HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2450.SNP.1:34872865 chr01:034872865 0 W/34872865-34872865 FN2450 SNP G -> A AC=1;AN=200;BQB=0.724337;DP=4935;DP4=2530,2077,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000202634;MQB=1.83213e-11;MQSB=0.972038;RPB=0.236753;SGB=86.5007;VDB=0.0831003;EFF=INTRON(MODIFIER||||909|LOC_Os01g60280|protein_coding|CODING|LOC_Os01g60280.1|11|1) FN2646-S.SNP.1:34899185 chr01:034899185 0 W/34899185-34899185 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.927959;DP=4833;DP4=2455,2116,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.30644e-10;MQSB=0.881303;RPB=0.354526;SGB=51.0851;VDB=0.273955;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L10|637|LOC_Os01g60330|protein_coding|CODING|LOC_Os01g60330.1|1|1) FN2152-S.SNP.1:34900164 chr01:034900164 0 W/34900164-34900164 FN2152-S SNP G -> A AC=1;AN=168;BQB=0.305481;DP=3559;DP4=1742,1784,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.16082e-07;MQSB=0.993815;RPB=0.753342;SGB=-82.6471;VDB=0.724988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D337N|637|LOC_Os01g60330|protein_coding|CODING|LOC_Os01g60330.1|1|1) FN2213-S.SNP.1:34903454 chr01:034903454 0 W/34903454-34903454 FN2213-S SNP C -> G AC=2;AN=190;BQB=0.565883;DP=4542;DP4=2258,1976,28,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.75636e-27;MQSB=0.598257;RPB=0.98801;SGB=174.702;VDB=0.722439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E392Q|520|LOC_Os01g60340|protein_coding|CODING|LOC_Os01g60340.1|10|1) FN-129.SNP.1:34903880 chr01:034903880 0 W/34903880-34903880 FN-129 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g60340 NTMC2Type1.1 protein, putative, expressed SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1421-S.SNP.1:34905728 chr01:034905728 0 W/34905728-34905728 FN1421-S Single Base Substitution A-T INTRON HOMO SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN872-S.SNP.1:34915401 chr01:034915401 0 W/34915401-34915401 FN872-S Single Base Substitution G-C INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN715-S.SNP.1:34916590 chr01:034916590 0 W/34916590-34916590 FN715-S Single Base Substitution T-C INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1047-S.SNP.1:34916803 chr01:034916803 0 W/34916803-34916803 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2754-S.SNP.1:34916998 chr01:034916998 0 W/34916998-34916998 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.31953;DP=8806;DP4=4636,3747,11,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=0.938762;MQSB=0.727271;RPB=0.951547;SGB=11.0951;VDB=0.142556;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN-144 Single Base Substitution G-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1031-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN1031-S Single Base Substitution G-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2173-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN2173-S SNP G -> C AC=1;AN=168;BQB=0.396691;DP=2615;DP4=866,1650,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.0688e-05;MQSB=0.00516436;RPB=0.695132;SGB=-16.2342;VDB=0.164484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN2790-S SNP G -> C AC=1;AN=198;BQB=0.956466;DP=5879;DP4=2638,2703,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.64282e-06;MQSB=0.81072;RPB=0.682175;SGB=6.15916;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN3564-S SNP G -> C AC=1;AN=188;BQB=0.98539;DP=4775;DP4=2242,2335,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.87486e-12;MQSB=0.997494;RPB=0.966242;SGB=98.9552;VDB=0.877282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN3787-S SNP G -> C AC=1;AN=190;BQB=0.799376;DP=3519;DP4=1492,1841,15,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.01528e-12;MQSB=0.952635;RPB=0.924568;SGB=94.6341;VDB=0.718977;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN3998-S SNP G -> C AC=1;AN=168;BQB=0.949031;DP=2747;DP4=1002,1572,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=4.78328e-05;MQSB=0.771517;RPB=0.202079;SGB=27.8864;VDB=0.228818;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN4189-S SNP G -> C AC=1;AN=170;BQB=0.944115;DP=3313;DP4=1376,1765,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.52605e-07;MQSB=0.763229;RPB=0.86955;SGB=61.2001;VDB=0.572958;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.1:34919998 chr01:034919998 0 W/34919998-34919998 FN432-S Single Base Substitution G-C INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2428.SNP.1:34920177 chr01:034920177 0 W/34920177-34920177 FN2428 SNP G -> A AC=1;AN=200;BQB=0.455365;DP=3245;DP4=1342,1359,10,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000831979;MQSB=0.739441;RPB=0.844159;SGB=-14.9257;VDB=0.978341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.1:34936577 chr01:034936577 0 W/34936577-34936577 FN3492-S SNP C -> G AC=1;AN=184;BQB=0.986418;DP=5303;DP4=2718,2398,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.1934e-06;MQSB=0.870611;RPB=0.823987;SGB=28.7043;VDB=0.945472;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.1:34937624 chr01:034937624 0 W/34937624-34937624 FN767-S Single Base Substitution G-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2594-S.SNP.1:34940296 chr01:034940296 0 W/34940296-34940296 FN2594-S SNP T -> A AC=1;AN=198;BQB=0.0949664;DP=8681;DP4=4207,4002,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000115194;MQB=5.14092e-09;MQSB=0.786531;RPB=0.716896;SGB=-12.0504;VDB=0.21378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N79K|148|LOC_Os01g60410|protein_coding|CODING|LOC_Os01g60410.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N79K|148|LOC_Os01g60410|protein_coding|CODING|LOC_Os01g60410.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N79K|148|LOC_Os01g60410|protein_coding|CODING|LOC_Os01g60410.3|4|1) FN373-S.SNP.1:34947763 chr01:034947763 0 W/34947763-34947763 FN373-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g60430 pentatricopeptide repeat-containing protein, putative, expressed SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1521-S.SNP.1:34966303 chr01:034966303 0 W/34966303-34966303 FN1521-S Single Base Substitution T-A INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1521-S.SNP.1:34966312 chr01:034966312 0 W/34966312-34966312 FN1521-S Single Base Substitution G-C INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN416-S.SNP.1:34972919 chr01:034972919 0 W/34972919-34972919 FN416-S Single Base Substitution A-C INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3607-S.SNP.1:34975675 chr01:034975675 0 W/34975675-34975675 FN3607-S SNP G -> A AC=1;AN=190;BQB=0.992554;DP=2499;DP4=1027,1359,1,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.71953e-06;MQSB=0.977016;RPB=0.312018;SGB=49.0954;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.1:34977060 chr01:034977060 0 W/34977060-34977060 FN3879-S SNP C -> G AC=1;AN=158;BQB=0.953159;DP=2361;DP4=1170,1069,8,18;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.25499e-14;MQSB=0.568758;RPB=0.442807;SGB=108.239;VDB=0.816565;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.1:34988249 chr01:034988249 0 W/34988249-34988249 FN4041-S SNP G -> A AC=2;AN=168;BQB=0.728119;DP=2531;DP4=1195,1206,8,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.17016e-12;MQSB=0.519714;RPB=0.812284;SGB=-14.5109;VDB=0.979219;EFF=INTRON(MODIFIER||||117|LOC_Os01g60500|protein_coding|CODING|LOC_Os01g60500.1|1|1) FN711-S.SNP.1:34990975 chr01:034990975 0 W/34990975-34990975 FN711-S Single Base Substitution A-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2792-S.SNP.1:34993044 chr01:034993044 0 W/34993044-34993044 FN2792-S SNP T -> C AC=1;AN=198;BQB=0.851709;DP=3915;DP4=1876,1732,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000255428;MQB=2.74183e-06;MQSB=0.640027;RPB=0.427778;SGB=47.5102;VDB=0.0595619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.1:34993098 chr01:034993098 0 W/34993098-34993098 FN1321-S Single Base Substitution C-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2092-S.SNP.1:34997646 chr01:034997646 0 W/34997646-34997646 FN2092-S SNP G -> T AC=2;AN=168;BQB=0.0024689;DP=3220;DP4=963,1390,51,42;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=6.13885e-08;MQSB=7.84869e-14;RPB=0.0297483;SGB=-1144.27;VDB=0.195747;EFF=INTRON(MODIFIER||||283|LOC_Os01g60520|protein_coding|CODING|LOC_Os01g60520.1|1|1) FN-87.SNP.1:34999930 chr01:034999930 0 W/34999930-34999930 FN-87 Single Base Substitution G-T INTRON HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2199-S.SNP.1:35000405 chr01:035000405 0 W/35000405-35000405 FN2199-S SNP G -> T AC=1;AN=190;BQB=0.465956;DP=4653;DP4=2268,2061,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33559e-09;MQSB=0.999658;RPB=0.555286;SGB=7.21887;VDB=0.0848251;EFF=INTRON(MODIFIER||||283|LOC_Os01g60520|protein_coding|CODING|LOC_Os01g60520.1|1|1) FN-83.SNP.1:35007312 chr01:035007312 0 W/35007312-35007312 FN-83 Single Base Substitution C-A INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1526-S.SNP.1:35008744 chr01:035008744 0 W/35008744-35008744 FN1526-S Single Base Substitution C-G INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1618-S.SNP.1:35011677 chr01:035011677 0 W/35011677-35011677 FN1618-S Single Base Substitution C-G INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2318.SNP.1:35024429 chr01:035024429 0 W/35024429-35024429 FN2318 SNP C -> T AC=1;AN=192;BQB=0.954931;DP=4847;DP4=2268,2278,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00495152;MQB=0.00135798;MQSB=0.192453;RPB=0.579757;SGB=7.3548;VDB=0.572828;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W242*|282|LOC_Os01g60580|protein_coding|CODING|LOC_Os01g60580.1|1|1) FN3667-S.SNP.1:35025934 chr01:035025934 0 W/35025934-35025934 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.9767;DP=2767;DP4=1453,1213,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000361402;MQB=7.17571e-07;MQSB=0.932792;RPB=0.87199;SGB=28.9929;VDB=0.502759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R247H|356|LOC_Os01g60590|protein_coding|CODING|LOC_Os01g60590.1|3|1) FN4206-S.SNP.1:35026244 chr01:035026244 0 W/35026244-35026244 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.948021;DP=2694;DP4=1318,1295,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.37998e-05;MQSB=0.602154;RPB=0.784587;SGB=34.878;VDB=0.661915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E144K|356|LOC_Os01g60590|protein_coding|CODING|LOC_Os01g60590.1|3|1) FN4206-S.SNP.1:35026528 chr01:035026528 0 W/35026528-35026528 FN4206-S SNP G -> T AC=1;AN=170;BQB=0.998325;DP=2633;DP4=1272,1279,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=2.62746e-10;MQSB=0.941563;RPB=0.430218;SGB=58.9766;VDB=0.11549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A75D|356|LOC_Os01g60590|protein_coding|CODING|LOC_Os01g60590.1|2|1) FN2264-S.SNP.1:35030508 chr01:035030508 0 W/35030508-35030508 FN2264-S SNP G -> A AC=2;AN=190;BQB=0.302016;DP=5092;DP4=2750,1946,17,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.20542e-12;MQSB=0.656103;RPB=0.710235;SGB=90.0802;VDB=0.308092;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.1:35039894 chr01:035039894 0 W/35039894-35039894 FN798-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g60610 retrotransposon protein, putative, unclassified, expressed SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2089-S.SNP.1:35040895 chr01:035040895 0 W/35040895-35040895 FN2089-S SNP G -> C AC=2;AN=168;BQB=0.969328;DP=1569;DP4=745,669,33,66;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.167623;MQB=3.23018e-14;MQSB=0.916995;RPB=0.256062;SGB=-581.718;VDB=1.21169e-10;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S982|983|LOC_Os01g60610|protein_coding|CODING|LOC_Os01g60610.1|3|1) FN4094-S.SNP.1:35041404 chr01:035041404 0 W/35041404-35041404 FN4094-S SNP T -> A AC=1;AN=182;BQB=0.997024;DP=3212;DP4=1459,1632,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.0756538;MQB=0.00611986;MQSB=1.18327e-22;RPB=0.979078;SGB=23.1441;VDB=0.717563;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.1:35041405 chr01:035041405 0 W/35041405-35041405 FN4094-S SNP T -> A AC=1;AN=182;BQB=0.809945;DP=3215;DP4=1486,1627,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.0768274;MQB=0.0142603;MQSB=2.99889e-22;RPB=0.82975;SGB=53.1331;VDB=0.769225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.1:35041848 chr01:035041848 0 W/35041848-35041848 FN2498 SNP C -> T AC=1;AN=200;BQB=0.0113483;DP=4323;DP4=2211,1826,7,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00809623;MQB=0.0214845;MQSB=0.634047;RPB=0.747322;SGB=9.48993;VDB=0.803842;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1849|1956|LOC_Os01g60620|protein_coding|CODING|LOC_Os01g60620.1|4|1) FN3369-S.SNP.1:35042409 chr01:035042409 0 W/35042409-35042409 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.593207;DP=4090;DP4=1972,1998,10,19;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0139364;MQB=0.000189351;MQSB=0.000117306;RPB=0.65269;SGB=125.613;VDB=0.214785;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1687|1956|LOC_Os01g60620|protein_coding|CODING|LOC_Os01g60620.1|3|1) FN3280-S.SNP.1:35043964 chr01:035043964 0 W/35043964-35043964 FN3280-S SNP G -> C AC=1;AN=184;BQB=0.998674;DP=3388;DP4=1445,1858,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0324675;MQB=0.437066;MQSB=0.00710523;RPB=0.897011;SGB=32.2261;VDB=0.674631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A1169G|1956|LOC_Os01g60620|protein_coding|CODING|LOC_Os01g60620.1|3|1) FN2428.SNP.1:35047776 chr01:035047776 0 W/35047776-35047776 FN2428 SNP G -> A AC=1;AN=200;BQB=0.393611;DP=3959;DP4=2001,1739,8,6;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.02829;MQB=0.999937;MQSB=1.17301e-08;RPB=0.860713;SGB=21.6694;VDB=0.92859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.1:35048375 chr01:035048375 0 W/35048375-35048375 FN3472-S SNP C -> A AC=2;AN=184;BQB=0.99714;DP=2400;DP4=769,1538,11,16;HOB=0.0215028;ICB=0.494625;MQ=22;MQ0F=0.203333;MQB=0.879275;MQSB=9.95844e-32;RPB=0.944178;SGB=53.5365;VDB=0.531969;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.1:35049470 chr01:035049470 0 W/35049470-35049470 FN_812-4-1 Single Base Substitution G-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN3756-S.SNP.1:35056118 chr01:035056118 0 W/35056118-35056118 FN3756-S SNP G -> A AC=1;AN=190;BQB=0.903429;DP=3333;DP4=1737,1485,5,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.54653e-11;MQSB=0.736243;RPB=0.445523;SGB=90.0802;VDB=0.265674;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.1:35057283 chr01:035057283 0 W/35057283-35057283 FN-179 Single Base Substitution C-A INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN957-S.SNP.1:35072332 chr01:035072332 0 W/35072332-35072332 FN957-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g60660 methionyl-tRNA synthetase, putative, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN-155.SNP.1:35074865 chr01:035074865 0 W/35074865-35074865 FN-155 Single Base Substitution A-T INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3545-S.SNP.1:35075581 chr01:035075581 0 W/35075581-35075581 FN3545-S SNP A -> G AC=1;AN=188;BQB=0.627915;DP=2772;DP4=1310,1324,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.22202e-06;MQSB=0.915206;RPB=0.717879;SGB=20.9896;VDB=0.995152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.1:35076470 chr01:035076470 0 W/35076470-35076470 FN3743-S SNP C -> T AC=1;AN=190;BQB=0.997833;DP=2841;DP4=1283,1464,4,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31353e-12;MQSB=0.947074;RPB=0.840153;SGB=57.4238;VDB=0.703347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.1:35076680 chr01:035076680 0 W/35076680-35076680 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.401327;DP=3815;DP4=2056,1554,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.81494e-14;MQSB=0.263931;RPB=0.21211;SGB=-8.79096;VDB=0.958539;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.1:35076899 chr01:035076899 0 W/35076899-35076899 FN-356 Single Base Substitution G-C INTERGENIC HOMO SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN441-S.SNP.1:35078857 chr01:035078857 0 W/35078857-35078857 FN441-S Single Base Substitution C-T INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3391-S.SNP.1:35084690 chr01:035084690 0 W/35084690-35084690 FN3391-S SNP C -> A AC=1;AN=184;BQB=0.906652;DP=4231;DP4=1791,2316,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.44417e-11;MQSB=0.837579;RPB=0.995909;SGB=53.3568;VDB=0.897428;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R300L|947|LOC_Os01g60670|protein_coding|CODING|LOC_Os01g60670.1|1|1) FN-143.SNP.1:35102780 chr01:035102780 0 W/35102780-35102780 FN-143 Single Base Substitution G-C INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-87.SNP.1:35104127 chr01:035104127 0 W/35104127-35104127 FN-87 Single Base Substitution G-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-353.SNP.1:35106615 chr01:035106615 0 W/35106615-35106615 FN-353 Single Base Substitution G-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2240-S.SNP.1:35109119 chr01:035109119 0 W/35109119-35109119 FN2240-S SNP G -> C AC=1;AN=190;BQB=0.703112;DP=5557;DP4=2395,2808,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59445e-06;MQSB=0.994158;RPB=0.278567;SGB=15.9981;VDB=0.559446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.1:35109184 chr01:035109184 0 W/35109184-35109184 FN2386 SNP A -> T AC=1;AN=192;BQB=0.835567;DP=5611;DP4=2656,2533,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15723e-10;MQSB=0.983231;RPB=0.180446;SGB=-10.8182;VDB=0.413233;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.1:35114455 chr01:035114455 0 W/35114455-35114455 FN-375 Single Base Substitution G-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2221-S.SNP.1:35116844 chr01:035116844 0 W/35116844-35116844 FN2221-S SNP T -> G AC=1;AN=190;BQB=0.988118;DP=6187;DP4=2228,3544,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.073218;MQB=0.754415;MQSB=0.0425323;RPB=0.748013;SGB=103.624;VDB=0.282283;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.1:35121130 chr01:035121130 0 W/35121130-35121130 FN722-S Single Base Substitution G-A INTERGENIC HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN819-S.SNP.1:35127233 chr01:035127233 0 W/35127233-35127233 FN819-S Single Base Substitution A-G INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2470.SNP.1:35128777 chr01:035128777 0 W/35128777-35128777 FN2470 SNP C -> T AC=1;AN=200;BQB=0.992062;DP=4798;DP4=2355,2147,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.55063e-14;MQSB=0.877824;RPB=0.97584;SGB=27.1468;VDB=0.178607;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.1:35131959 chr01:035131959 0 W/35131959-35131959 FN-144 Single Base Substitution T-C INTRON HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1358-S.SNP.1:35133823 chr01:035133823 0 W/35133823-35133823 FN1358-S Single Base Substitution G-A INTRON HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN-96.SNP.1:35144611 chr01:035144611 0 W/35144611-35144611 FN-96 Single Base Substitution G-A INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN513-S.SNP.1:35149900 chr01:035149900 0 W/35149900-35149900 FN513-S Single Base Substitution C-G INTRON HOMO SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1739-S.SNP.1:35150823 chr01:035150823 0 W/35150823-35150823 FN1739-S SNP G -> A AC=1;AN=188;BQB=0.82868;DP=4066;DP4=2089,1934,15,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.73321e-14;MQSB=0.998602;RPB=0.674726;SGB=-42.845;VDB=0.956253;EFF=INTRON(MODIFIER||||182|LOC_Os01g60780|protein_coding|CODING|LOC_Os01g60780.1|2|1),INTRON(MODIFIER||||182|LOC_Os01g60780|protein_coding|CODING|LOC_Os01g60780.2|2|1) FN2549-S.SNP.1:35169198 chr01:035169198 0 W/35169198-35169198 FN2549-S SNP T -> C AC=1;AN=198;BQB=0.855171;DP=4249;DP4=1994,1897,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4514e-08;MQSB=0.974054;RPB=0.282273;SGB=18.9639;VDB=0.547437;EFF=UTR_5_PRIME(MODIFIER||89||379|LOC_Os01g60810|protein_coding|CODING|LOC_Os01g60810.1|1|1) FN2386.SNP.1:35172488 chr01:035172488 0 W/35172488-35172488 FN2386 SNP A -> G AC=1;AN=192;BQB=0.671278;DP=4774;DP4=2261,2082,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.84664e-07;MQSB=0.951906;RPB=0.486168;SGB=13.6122;VDB=0.601048;EFF=INTRON(MODIFIER||||196|LOC_Os01g60820|protein_coding|CODING|LOC_Os01g60820.1|2|1) FN3928-S.SNP.1:35177024 chr01:035177024 0 W/35177024-35177024 FN3928-S SNP T -> C AC=2;AN=158;BQB=0.806706;DP=2235;DP4=1070,1083,13,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.38747e-11;MQSB=0.97226;RPB=0.694169;SGB=40.4048;VDB=0.0599649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E328G|437|LOC_Os01g60850|protein_coding|CODING|LOC_Os01g60850.1|2|1),UTR_3_PRIME(MODIFIER||713||170|LOC_Os01g60830|protein_coding|CODING|LOC_Os01g60830.1|3|1) FN1736-S.SNP.1:35177844 chr01:035177844 0 W/35177844-35177844 FN1736-S SNP C -> T AC=1;AN=188;BQB=0.943036;DP=2192;DP4=1144,1007,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.62478e-08;MQSB=0.996477;RPB=0.416317;SGB=39.5276;VDB=0.500099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A55T|437|LOC_Os01g60850|protein_coding|CODING|LOC_Os01g60850.1|2|1) FN945-S.SNP.1:35183447 chr01:035183447 0 W/35183447-35183447 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN852-S.SNP.1:35190609 chr01:035190609 0 W/35190609-35190609 FN852-S Single Base Substitution G-A INTERGENIC HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN4094-S.SNP.1:35193998 chr01:035193998 0 W/35193998-35193998 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.996092;DP=3263;DP4=1548,1646,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.12228e-08;MQSB=0.999314;RPB=0.110171;SGB=57.644;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.1:35196825 chr01:035196825 0 W/35196825-35196825 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.0188558;DP=3959;DP4=1731,1978,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.87958e-09;MQSB=0.359137;RPB=0.986292;SGB=-37.4502;VDB=0.0611705;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.1:35196921 chr01:035196921 0 W/35196921-35196921 FN544-S Single Base Substitution C-T INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN3679-S.SNP.1:35197091 chr01:035197091 0 W/35197091-35197091 FN3679-S SNP T -> C AC=1;AN=190;BQB=0.86536;DP=2754;DP4=1376,1223,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.04442e-10;MQSB=0.947707;RPB=0.736225;SGB=62.7569;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.1:35221171 chr01:035221171 0 W/35221171-35221171 FN2651-S SNP T -> A AC=1;AN=200;BQB=0.625152;DP=5135;DP4=2360,2541,7,22;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.61612e-12;MQSB=0.35233;RPB=0.631255;SGB=94.3471;VDB=0.721699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.1:35223220 chr01:035223220 0 W/35223220-35223220 FN1549-S Single Base Substitution G-T INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1082-S.SNP.1:35223960 chr01:035223960 0 W/35223960-35223960 FN1082-S Single Base Substitution G-A INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN2730-S.SNP.1:35225556 chr01:035225556 0 W/35225556-35225556 FN2730-S SNP A -> G AC=1;AN=200;BQB=0.839613;DP=4864;DP4=2429,2165,13,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.94131e-11;MQSB=0.0374968;RPB=0.949948;SGB=45.1159;VDB=0.917528;EFF=INTRON(MODIFIER||||138|LOC_Os01g60900|protein_coding|CODING|LOC_Os01g60900.1|2|1) FN3861-S.SNP.1:35227883 chr01:035227883 0 W/35227883-35227883 FN3861-S SNP T -> A AC=2;AN=158;BQB=0.828929;DP=2438;DP4=1211,1107,6,5;HOB=0.024996;ICB=0.493752;MQ=34;MQ0F=0;MQB=0.148123;MQSB=0.786566;RPB=0.53706;SGB=42.6978;VDB=0.412316;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.1:35232350 chr01:035232350 0 W/35232350-35232350 FN4105-S SNP C -> T AC=2;AN=182;BQB=0.851751;DP=3062;DP4=1609,1362,18,5;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.45851e-12;MQSB=0.963466;RPB=0.955365;SGB=70.7363;VDB=0.605305;EFF=UTR_3_PRIME(MODIFIER||832||461|LOC_Os01g60910|protein_coding|CODING|LOC_Os01g60910.2|2|1) FN3500-S.SNP.1:35235124 chr01:035235124 0 W/35235124-35235124 FN3500-S SNP T -> G AC=1;AN=188;BQB=0.320601;DP=2919;DP4=1300,1502,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=2.39608e-07;MQSB=0.733988;RPB=0.812624;SGB=94.4119;VDB=0.599872;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.1:35235832 chr01:035235832 0 W/35235832-35235832 FN812-S Single Base Substitution G-A INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3667-S.SNP.1:35239155 chr01:035239155 0 W/35239155-35239155 FN3667-S SNP T -> C AC=1;AN=190;BQB=0.997591;DP=2704;DP4=1336,1187,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.46495e-09;MQSB=0.0468052;RPB=0.84273;SGB=46.7622;VDB=0.60711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F62L|348|LOC_Os01g60920|protein_coding|CODING|LOC_Os01g60920.1|2|1) FN2273-S.SNP.1:35267209 chr01:035267209 0 W/35267209-35267209 FN2273-S SNP A -> T AC=1;AN=190;BQB=0.753073;DP=4376;DP4=1775,2160,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.11319e-16;MQSB=0.988348;RPB=0.624747;SGB=59.414;VDB=0.5728;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.1:35269299 chr01:035269299 0 W/35269299-35269299 FN3843-S SNP A -> G AC=1;AN=190;BQB=0.874417;DP=2980;DP4=1550,1327,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77625e-15;MQSB=0.99988;RPB=0.983584;SGB=46.6446;VDB=0.893257;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.1:35269723 chr01:035269723 0 W/35269723-35269723 FN4096-S SNP C -> T AC=1;AN=182;BQB=0.947945;DP=3365;DP4=1715,1561,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.9542e-07;MQSB=0.971562;RPB=0.920162;SGB=-3.9155;VDB=0.870651;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.1:35271268 chr01:035271268 0 W/35271268-35271268 FN689-S Single Base Substitution G-C INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1281-S.SNP.1:35284144 chr01:035284144 0 W/35284144-35284144 FN1281-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN3413-S.SNP.1:35293651 chr01:035293651 0 W/35293651-35293651 FN3413-S SNP G -> A AC=2;AN=184;BQB=0.412412;DP=3209;DP4=1494,1579,14,19;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.0931754;MQB=0.349744;MQSB=3.47325e-10;RPB=0.255044;SGB=143.7;VDB=0.894921;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T371|1047|LOC_Os01g61000|protein_coding|CODING|LOC_Os01g61000.1|1|1) FN1115-S.SNP.1:35301225 chr01:035301225 0 W/35301225-35301225 FN1115-S Single Base Substitution T-G INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN918-S.SNP.1:35304611 chr01:035304611 0 W/35304611-35304611 FN918-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g61010 nodulin, putative, expressed SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2262-S.SNP.1:35308496 chr01:035308496 0 W/35308496-35308496 FN2262-S SNP G -> A AC=2;AN=190;BQB=0.997458;DP=4855;DP4=2446,2069,32,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.85613e-29;MQSB=0.933581;RPB=0.975675;SGB=199.579;VDB=0.357378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.1:35310851 chr01:035310851 0 W/35310851-35310851 FN1353-S Single Base Substitution A-T INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1550-S.SNP.1:35312228 chr01:035312228 0 W/35312228-35312228 FN1550-S Single Base Substitution C-T INTRON HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1156-XA21.SNP.1:35319726 chr01:035319726 0 W/35319726-35319726 FN1156-XA21 Single Base Substitution T-C INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2234-S.SNP.1:35320379 chr01:035320379 0 W/35320379-35320379 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.525276;DP=4790;DP4=2046,2425,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.3176e-05;MQSB=0.926981;RPB=0.695414;SGB=28.9929;VDB=0.741616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.1:35322221 chr01:035322221 0 W/35322221-35322221 FN1478-S Single Base Substitution T-C INTRON HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2231-S.SNP.1:35328389 chr01:035328389 0 W/35328389-35328389 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.828633;DP=4003;DP4=1825,1773,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.42695e-06;MQSB=0.560825;RPB=0.908865;SGB=43.2083;VDB=0.580439;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.1:35331276 chr01:035331276 0 W/35331276-35331276 FN588-S Single Base Substitution C-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN964-S.SNP.1:35333787 chr01:035333787 0 W/35333787-35333787 FN964-S Single Base Substitution C-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-175.SNP.1:35333861 chr01:035333861 0 W/35333861-35333861 FN-175 Single Base Substitution T-C INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2486.SNP.1:35333861 chr01:035333861 0 W/35333861-35333861 FN2486 SNP T -> C AC=1;AN=200;BQB=0.923176;DP=5040;DP4=2269,2455,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54973e-11;MQSB=0.966098;RPB=0.595958;SGB=91.1059;VDB=0.906276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.1:35346256 chr01:035346256 0 W/35346256-35346256 FN3326-S SNP T -> C AC=2;AN=184;BQB=0.999647;DP=2673;DP4=1308,1133,14,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.44356e-16;MQSB=0.989996;RPB=0.494802;SGB=99.14;VDB=0.00884412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.1:35346361 chr01:035346361 0 W/35346361-35346361 FN3997-S SNP T -> A AC=1;AN=168;BQB=0.61713;DP=2540;DP4=1218,1232,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06011e-07;MQSB=0.908339;RPB=0.754155;SGB=56.6036;VDB=0.871548;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.1:35356428 chr01:035356428 0 W/35356428-35356428 FN2205-S SNP G -> A AC=1;AN=190;BQB=0.951543;DP=4569;DP4=1803,2442,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.23944;MQB=0.157549;MQSB=0;RPB=0.867369;SGB=68.0854;VDB=0.551556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1108S|1700|LOC_Os01g61090|protein_coding|CODING|LOC_Os01g61090.1|4|1) FN590-S.SNP.1:35366162 chr01:035366162 0 W/35366162-35366162 FN590-S Single Base Substitution T-A SPLICE_SITE_REGION HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN2550-S.SNP.1:35392927 chr01:035392927 0 W/35392927-35392927 FN2550-S SNP C -> T AC=1;AN=198;BQB=0.820613;DP=4165;DP4=1930,2028,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000134674;MQSB=0.878831;RPB=0.0164531;SGB=13.7737;VDB=0.00396559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A123V|429|LOC_Os01g61130|protein_coding|CODING|LOC_Os01g61130.1|1|1) FN3834-S.SNP.1:35400654 chr01:035400654 0 W/35400654-35400654 FN3834-S SNP A -> G AC=1;AN=190;BQB=0.999828;DP=2592;DP4=1252,1267,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0204e-06;MQSB=0.949869;RPB=0.0654695;SGB=35.4339;VDB=0.742057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.1:35400702 chr01:035400702 0 W/35400702-35400702 FN-220 Single Base Substitution T-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2158-S.SNP.1:35406600 chr01:035406600 0 W/35406600-35406600 FN2158-S SNP C -> T AC=1;AN=168;BQB=0.032141;DP=4172;DP4=2185,1948,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.81515e-10;MQSB=0.977536;RPB=0.329335;SGB=-12.3568;VDB=0.753349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.1:35409533 chr01:035409533 0 W/35409533-35409533 FN2617-S SNP A -> G AC=1;AN=198;BQB=0.566279;DP=3931;DP4=1607,2068,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.79722e-12;MQSB=0.983701;RPB=0.0539317;SGB=81.7147;VDB=0.168606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I16V|652|LOC_Os01g61180|protein_coding|CODING|LOC_Os01g61180.1|1|1) FN3597-S.SNP.1:35456832 chr01:035456832 0 W/35456832-35456832 FN3597-S SNP T -> A AC=2;AN=188;BQB=0.795158;DP=1875;DP4=1490,60,20,0;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=8.14871e-09;MQSB=0.0168864;RPB=0.962167;SGB=-110.978;VDB=0.0298964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.1:35461551 chr01:035461551 0 W/35461551-35461551 FN2579-S SNP C -> G AC=1;AN=198;BQB=0.724014;DP=4045;DP4=1776,2056,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=9.2858e-11;MQSB=0.996577;RPB=0.970884;SGB=101.266;VDB=0.411072;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.1:35462489 chr01:035462489 0 W/35462489-35462489 FN3387-S SNP G -> A AC=1;AN=184;BQB=0.889804;DP=3069;DP4=1354,1611,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43279e-08;MQSB=0.988261;RPB=0.897996;SGB=49.835;VDB=0.738593;EFF=INTERGENIC(MODIFIER||||||||||1) FN-145.SNP.1:35474909 chr01:035474909 0 W/35474909-35474909 FN-145 Single Base Substitution G-T INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3448-S.SNP.1:35483229 chr01:035483229 0 W/35483229-35483229 FN3448-S SNP A -> T AC=1;AN=184;BQB=0.973602;DP=2531;DP4=1228,1222,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.24028e-07;MQSB=0.970609;RPB=0.902925;SGB=25.1826;VDB=0.860346;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.1:35492399 chr01:035492399 0 W/35492399-35492399 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.986336;DP=3852;DP4=2093,1614,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68714e-06;MQSB=0.540482;RPB=0.72063;SGB=48.7425;VDB=0.910754;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A159|255|LOC_Os01g61350|protein_coding|CODING|LOC_Os01g61350.1|1|1) FN1196-S.SNP.1:35495565 chr01:035495565 0 W/35495565-35495565 FN1196-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN3449-S.SNP.1:35500870 chr01:035500870 0 W/35500870-35500870 FN3449-S SNP A -> G AC=1;AN=184;BQB=0.98153;DP=2781;DP4=1433,1253,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30987e-06;MQSB=0.999374;RPB=0.987576;SGB=8.14452;VDB=0.802375;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E185|396|LOC_Os01g61380|protein_coding|CODING|LOC_Os01g61380.1|2|1) FN1108-S.SNP.1:35505778 chr01:035505778 0 W/35505778-35505778 FN1108-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2554-S.SNP.1:35512069 chr01:035512069 0 W/35512069-35512069 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.92725;DP=4042;DP4=1870,1898,6,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68564e-08;MQSB=0.888667;RPB=0.868178;SGB=42.3199;VDB=0.106846;EFF=INTRON(MODIFIER||||499|LOC_Os01g61410|protein_coding|CODING|LOC_Os01g61410.1|6|1),INTRON(MODIFIER||||456|LOC_Os01g61410|protein_coding|CODING|LOC_Os01g61410.3|6|1),INTRON(MODIFIER||||238|LOC_Os01g61410|protein_coding|CODING|LOC_Os01g61410.4|3|1) FN-273.SNP.1:35527085 chr01:035527085 0 W/35527085-35527085 FN-273 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN4075-S.SNP.1:35532016 chr01:035532016 0 W/35532016-35532016 FN4075-S SNP C -> T AC=1;AN=182;BQB=0.995363;DP=3126;DP4=1474,1547,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03212e-08;MQSB=0.909446;RPB=0.777764;SGB=23.1441;VDB=0.368145;EFF=INTRON(MODIFIER||||111|LOC_Os01g61450|protein_coding|CODING|LOC_Os01g61450.1|1|1) FN-34.SNP.1:35532642 chr01:035532642 0 W/35532642-35532642 FN-34 Single Base Substitution C-T INTERGENIC Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN927-S.SNP.1:35537305 chr01:035537305 0 W/35537305-35537305 FN927-S Single Base Substitution T-C INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN817-S.SNP.1:35542847 chr01:035542847 0 W/35542847-35542847 FN817-S Single Base Substitution A-T INTRON HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN-410.SNP.1:35543315 chr01:035543315 0 W/35543315-35543315 FN-410 Single Base Substitution C-T INTRON HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN3427-S.SNP.1:35550746 chr01:035550746 0 W/35550746-35550746 FN3427-S SNP T -> C AC=2;AN=184;BQB=0.994005;DP=2622;DP4=1251,1290,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.2475e-14;MQSB=0.877144;RPB=0.571575;SGB=103.004;VDB=0.427344;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.1:35552720 chr01:035552720 0 W/35552720-35552720 FN542-S Single Base Substitution A-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1366-S.SNP.1:35555869 chr01:035555869 0 W/35555869-35555869 FN1366-S Single Base Substitution A-T INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN4116-S.SNP.1:35558574 chr01:035558574 0 W/35558574-35558574 FN4116-S SNP G -> A AC=2;AN=182;BQB=0.979923;DP=3171;DP4=1603,1461,13,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.5693e-17;MQSB=0.93472;RPB=0.999863;SGB=134.329;VDB=0.313981;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E104|215|LOC_Os01g61480|protein_coding|CODING|LOC_Os01g61480.1|1|1) CW-631-3-1.SNP.1:35563753 chr01:035563753 0 W/35563753-35563753 CW-631-3-1 Single Base Substitution G-C INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2423.SNP.1:35565052 chr01:035565052 0 W/35565052-35565052 FN2423 SNP T -> A AC=2;AN=200;BQB=0.374546;DP=3425;DP4=1425,1573,13,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.96481e-17;MQSB=0.0108548;RPB=0.405765;SGB=155.578;VDB=0.800246;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.1:35568085 chr01:035568085 0 W/35568085-35568085 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.967814;DP=4452;DP4=2365,1823,9,9;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00831087;MQB=4.03461e-06;MQSB=1.37236e-38;RPB=0.808553;SGB=77.2904;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.1:35574975 chr01:035574975 0 W/35574975-35574975 FN2683-S SNP C -> A AC=1;AN=200;BQB=0.979133;DP=4963;DP4=2279,2369,21,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00644771;MQB=1.30176e-06;MQSB=2.57606e-14;RPB=0.757985;SGB=65.9573;VDB=0.532987;EFF=INTRON(MODIFIER||||1767|LOC_Os01g61490|protein_coding|CODING|LOC_Os01g61490.1|5|1) FN-361.SNP.1:35576333 chr01:035576333 0 W/35576333-35576333 FN-361 Single Base Substitution G-T INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN785-S.SNP.1:35576406 chr01:035576406 0 W/35576406-35576406 FN785-S Single Base Substitution G-A INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3538-S.SNP.1:35581232 chr01:035581232 0 W/35581232-35581232 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.921151;DP=2923;DP4=1322,1524,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57858e-06;MQSB=0.888494;RPB=0.996736;SGB=39.8925;VDB=0.112814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.1:35587936 chr01:035587936 0 W/35587936-35587936 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.609437;DP=3933;DP4=1928,1821,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20024e-06;MQSB=0.674375;RPB=0.929077;SGB=49.0954;VDB=0.289629;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L148|497|LOC_Os01g61510|protein_coding|CODING|LOC_Os01g61510.1|1|1) FN2235-S.SNP.1:35587937 chr01:035587937 0 W/35587937-35587937 FN2235-S SNP C -> A AC=1;AN=190;BQB=0.483852;DP=3934;DP4=1942,1785,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02452e-05;MQSB=0.770105;RPB=0.956148;SGB=39.6545;VDB=0.15051;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T147|497|LOC_Os01g61510|protein_coding|CODING|LOC_Os01g61510.1|1|1) FN-85.SNP.1:35588866 chr01:035588866 0 W/35588866-35588866 FN-85 Single Base Substitution C-A INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-85.SNP.1:35588867 chr01:035588867 0 W/35588867-35588867 FN-85 Single Base Substitution G-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN585-S.SNP.1:35590305 chr01:035590305 0 W/35590305-35590305 FN585-S Single Base Substitution C-A INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1368-S.SNP.1:35591143 chr01:035591143 0 W/35591143-35591143 FN1368-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g61520 expressed protein SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN540-S.SNP.1:35610329 chr01:035610329 0 W/35610329-35610329 FN540-S Single Base Substitution A-T INTRON HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN994-S.SNP.1:35620690 chr01:035620690 0 W/35620690-35620690 FN994-S Single Base Substitution C-T INTRON HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN4021-S.SNP.1:35630508 chr01:035630508 0 W/35630508-35630508 FN4021-S SNP G -> A AC=2;AN=168;BQB=0.646757;DP=2500;DP4=1356,1034,16,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.79814e-11;MQSB=0.120536;RPB=0.26911;SGB=69.0561;VDB=0.608758;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.1:35631281 chr01:035631281 0 W/35631281-35631281 FN4221-S SNP A -> T AC=1;AN=170;BQB=0.997941;DP=2623;DP4=1147,1368,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.75078e-10;MQSB=0.99991;RPB=0.338477;SGB=29.6545;VDB=0.126405;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.1:35644418 chr01:035644418 0 W/35644418-35644418 FN527-S Single Base Substitution G-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-92.SNP.1:35662165 chr01:035662165 0 W/35662165-35662165 FN-92 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g61640 NLI interacting factor-like phosphatase, putative, expressed SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN3422-S.SNP.1:35670846 chr01:035670846 0 W/35670846-35670846 FN3422-S SNP G -> A AC=1;AN=184;BQB=0.997;DP=3929;DP4=1898,1956,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0666836;MQB=0.854093;MQSB=0.258741;RPB=0.994897;SGB=18.2315;VDB=0.581329;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A316|957|LOC_Os01g61650|protein_coding|CODING|LOC_Os01g61650.1|1|1) FN3746-S.SNP.1:35672888 chr01:035672888 0 W/35672888-35672888 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.750337;DP=1748;DP4=991,675,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0200229;MQB=0.00849572;MQSB=0.173704;RPB=0.12214;SGB=39.9877;VDB=0.169441;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q909|957|LOC_Os01g61650|protein_coding|CODING|LOC_Os01g61650.1|2|1) FN2532-S.SNP.1:35673161 chr01:035673161 0 W/35673161-35673161 FN2532-S SNP T -> C AC=1;AN=186;BQB=0.65757;DP=3981;DP4=2119,1602,15,7;HOB=5.78101e-05;ICB=0.000116242;MQ=46;MQ0F=0.0188395;MQB=4.66044e-06;MQSB=0.161411;RPB=0.719239;SGB=15.7299;VDB=0.437259;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.1:35677891 chr01:035677891 0 W/35677891-35677891 FN829-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g61660 retrotransposon protein, putative, unclassified, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1351-S.SNP.1:35678676 chr01:035678676 0 W/35678676-35678676 FN1351-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g61660 retrotransposon protein, putative, unclassified, expressed SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2251-S.SNP.1:35679995 chr01:035679995 0 W/35679995-35679995 FN2251-S SNP T -> C AC=1;AN=190;BQB=0.514169;DP=3158;DP4=1157,1120,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000316656;MQB=0.0812542;MQSB=1.02891e-36;RPB=0.285794;SGB=-69.191;VDB=0.489152;EFF=INTERGENIC(MODIFIER||||||||||1) FN974-S.SNP.1:35681948 chr01:035681948 0 W/35681948-35681948 FN974-S Single Base Substitution A-G INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN811-S.SNP.1:35689381 chr01:035689381 0 W/35689381-35689381 FN811-S Single Base Substitution C-A INTRON HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN-291.SNP.1:35692269 chr01:035692269 0 W/35692269-35692269 FN-291 Single Base Substitution G-C INTERGENIC HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN952-S.SNP.1:35697998 chr01:035697998 0 W/35697998-35697998 FN952-S Single Base Substitution A-G INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN755-S.SNP.1:35704147 chr01:035704147 0 W/35704147-35704147 FN755-S Single Base Substitution C-A INTRON HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2426.SNP.1:35713900 chr01:035713900 0 W/35713900-35713900 FN2426 SNP C -> T AC=1;AN=200;BQB=0.790319;DP=3946;DP4=1944,1621,3,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.91231e-07;MQSB=0.294927;RPB=0.654894;SGB=63.4749;VDB=0.342358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.1:35717161 chr01:035717161 0 W/35717161-35717161 FN2713-S SNP A -> G AC=1;AN=200;BQB=0.783689;DP=4937;DP4=2250,2370,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.51613e-20;MQSB=0.957368;RPB=0.300317;SGB=65.9573;VDB=0.138567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.1:35718794 chr01:035718794 0 W/35718794-35718794 FN2465 SNP A -> G AC=1;AN=200;BQB=0.727811;DP=5120;DP4=2299,2288,14,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62701e-19;MQSB=0.999457;RPB=0.988277;SGB=108.768;VDB=0.424232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1680-S.SNP.1:35719501 chr01:035719501 0 W/35719501-35719501 FN1680-S SNP G -> A AC=1;AN=188;BQB=0.592303;DP=3150;DP4=1845,1243,22,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67839e-15;MQSB=0.921311;RPB=0.935449;SGB=30.2309;VDB=0.767665;EFF=INTERGENIC(MODIFIER||||||||||1) FN260-S.SNP.1:35720755 chr01:035720755 0 W/35720755-35720755 FN260-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g61750 hypothetical protein SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN2386.SNP.1:35721015 chr01:035721015 0 W/35721015-35721015 FN2386 SNP C -> T AC=1;AN=192;BQB=0.947413;DP=4990;DP4=2334,2287,16,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23469e-11;MQSB=0.698196;RPB=0.999771;SGB=49.4287;VDB=0.579942;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y63|87|LOC_Os01g61750|protein_coding|CODING|LOC_Os01g61750.1|2|1) FN1276-S.SNP.1:35725006 chr01:035725006 0 W/35725006-35725006 FN1276-S Single Base Substitution C-A INTRON HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3837-S.SNP.1:35728066 chr01:035728066 0 W/35728066-35728066 FN3837-S SNP A -> T AC=2;AN=190;BQB=0.994871;DP=2971;DP4=1197,1667,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.15816e-20;MQSB=0.995351;RPB=0.997345;SGB=67.0756;VDB=0.0961584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.1:35731286 chr01:035731286 0 W/35731286-35731286 FN3364-S SNP C -> T AC=2;AN=184;BQB=0.898635;DP=3063;DP4=1564,1373,11,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000326477;MQB=1.41999e-13;MQSB=0.949366;RPB=0.494954;SGB=45.9712;VDB=0.549521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.1:35731286 chr01:035731286 0 W/35731286-35731286 FN3768-S SNP C -> T AC=1;AN=190;BQB=0.605705;DP=2591;DP4=1361,1127,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51238e-08;MQSB=0.832128;RPB=0.994991;SGB=80.9724;VDB=0.287825;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.1:35731286 chr01:035731286 0 W/35731286-35731286 FN747-S Single Base Substitution C-T INTERGENIC HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN919-S.SNP.1:35731286 chr01:035731286 0 W/35731286-35731286 FN919-S Single Base Substitution C-T INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN527-S.SNP.1:35732720 chr01:035732720 0 W/35732720-35732720 FN527-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN735-S.SNP.1:35739658 chr01:035739658 0 W/35739658-35739658 FN735-S Single Base Substitution T-A INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2771-S.SNP.1:35743980 chr01:035743980 0 W/35743980-35743980 FN2771-S SNP T -> A AC=1;AN=198;BQB=0.991797;DP=4510;DP4=2140,2119,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000221729;MQB=1.83814e-11;MQSB=0.572347;RPB=0.28433;SGB=90.9049;VDB=0.725006;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.1:35750039 chr01:035750039 0 W/35750039-35750039 FN1093-S Single Base Substitution A-G INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1484-S.SNP.1:35752918 chr01:035752918 0 W/35752918-35752918 FN1484-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2451.SNP.1:35753461 chr01:035753461 0 W/35753461-35753461 FN2451 SNP A -> G AC=1;AN=200;BQB=0.18734;DP=5197;DP4=2511,2321,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.6745e-16;MQSB=0.994343;RPB=0.644669;SGB=127.947;VDB=0.0765895;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||300|LOC_Os01g61800|protein_coding|CODING|LOC_Os01g61800.1|4|1),INTRON(MODIFIER||||300|LOC_Os01g61800|protein_coding|CODING|LOC_Os01g61800.1|3|1);LOF=(LOC_Os01g61800|LOC_Os01g61800|1|1.00) FN2305.SNP.1:35757040 chr01:035757040 0 W/35757040-35757040 FN2305 SNP C -> T AC=2;AN=192;BQB=0.67305;DP=4989;DP4=2258,2433,20,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.23564e-22;MQSB=0.989542;RPB=0.999415;SGB=-1.78867;VDB=0.633729;EFF=UTR_3_PRIME(MODIFIER||376||126|LOC_Os01g61810|protein_coding|CODING|LOC_Os01g61810.2|5|1),INTRON(MODIFIER||||126|LOC_Os01g61810|protein_coding|CODING|LOC_Os01g61810.1|4|1) FN4106-S.SNP.1:35762064 chr01:035762064 0 W/35762064-35762064 FN4106-S SNP A -> T AC=1;AN=182;BQB=0.950347;DP=2902;DP4=1507,1311,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.11173e-05;MQSB=0.872646;RPB=0.423379;SGB=18.0739;VDB=0.732531;EFF=INTRON(MODIFIER||||312|LOC_Os01g61814|protein_coding|CODING|LOC_Os01g61814.1|4|1) FN4106-S.SNP.1:35762065 chr01:035762065 0 W/35762065-35762065 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.135876;DP=2897;DP4=1515,1300,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.63274e-06;MQSB=0.856844;RPB=0.461643;SGB=8.07909;VDB=0.472523;EFF=INTRON(MODIFIER||||312|LOC_Os01g61814|protein_coding|CODING|LOC_Os01g61814.1|4|1) FN670-S.SNP.1:35763011 chr01:035763011 0 W/35763011-35763011 FN670-S Single Base Substitution A-T INTRON HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3937-S.SNP.1:35763383 chr01:035763383 0 W/35763383-35763383 FN3937-S SNP A -> T AC=2;AN=158;BQB=0.991911;DP=2255;DP4=1134,1030,8,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.65028e-17;MQSB=0.893308;RPB=0.945009;SGB=77.8763;VDB=0.0893141;EFF=INTRON(MODIFIER||||312|LOC_Os01g61814|protein_coding|CODING|LOC_Os01g61814.1|4|1) FN3937-S.SNP.1:35763384 chr01:035763384 0 W/35763384-35763384 FN3937-S SNP A -> T AC=2;AN=158;BQB=0.944313;DP=2269;DP4=1140,1024,10,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.66905e-15;MQSB=0.84629;RPB=0.811512;SGB=47.5132;VDB=0.0912755;EFF=INTRON(MODIFIER||||312|LOC_Os01g61814|protein_coding|CODING|LOC_Os01g61814.1|4|1) FN2334.SNP.1:35765566 chr01:035765566 0 W/35765566-35765566 FN2334 SNP G -> C AC=2;AN=192;BQB=0.986485;DP=4985;DP4=2246,2231,13,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.13759e-18;MQSB=0.976781;RPB=0.631536;SGB=26.127;VDB=0.464737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.1:35769529 chr01:035769529 0 W/35769529-35769529 FN2781-S SNP A -> T AC=1;AN=198;BQB=0.970135;DP=4276;DP4=1846,2188,12,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.59875e-16;MQSB=0.922958;RPB=0.485246;SGB=94.0758;VDB=0.0425901;EFF=INTRON(MODIFIER||||366|LOC_Os01g61830|protein_coding|CODING|LOC_Os01g61830.1|4|1) FN2781-S.SNP.1:35769530 chr01:035769530 0 W/35769530-35769530 FN2781-S SNP A -> T AC=1;AN=198;BQB=0.789378;DP=4267;DP4=1842,2208,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.59212e-17;MQSB=0.985438;RPB=0.865719;SGB=28.4908;VDB=0.0720109;EFF=INTRON(MODIFIER||||366|LOC_Os01g61830|protein_coding|CODING|LOC_Os01g61830.1|4|1) FN3323-S.SNP.1:35774731 chr01:035774731 0 W/35774731-35774731 FN3323-S SNP T -> C AC=1;AN=184;BQB=0.888632;DP=2915;DP4=1478,1321,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43134e-11;MQSB=0.929232;RPB=0.809845;SGB=75.8731;VDB=0.159865;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.1:35775928 chr01:035775928 0 W/35775928-35775928 FN625-S Single Base Substitution C-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2782-S.SNP.1:35777155 chr01:035777155 0 W/35777155-35777155 FN2782-S SNP T -> G AC=1;AN=198;BQB=0.080282;DP=4157;DP4=2046,1770,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.42764e-19;MQSB=0.938067;RPB=0.875341;SGB=108.456;VDB=0.441083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.1:35779083 chr01:035779083 0 W/35779083-35779083 FN3354-S SNP A -> T AC=1;AN=184;BQB=0.508345;DP=2897;DP4=1401,1419,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.92893e-07;MQSB=0.785059;RPB=0.943941;SGB=42.7914;VDB=0.337981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.1:35796100 chr01:035796100 0 W/35796100-35796100 FN1046-S Single Base Substitution T-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3815-S.SNP.1:35798502 chr01:035798502 0 W/35798502-35798502 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.96747;DP=3103;DP4=1375,1604,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000197674;MQSB=0.810113;RPB=0.817384;SGB=30.8803;VDB=0.77747;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.1:35802816 chr01:035802816 0 W/35802816-35802816 FN-387 Single Base Substitution A-G INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2469.SNP.1:35809513 chr01:035809513 0 W/35809513-35809513 FN2469 SNP C -> T AC=2;AN=200;BQB=0.74012;DP=5060;DP4=2557,2232,19,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.91001e-18;MQSB=0.163639;RPB=0.810798;SGB=115.978;VDB=0.115536;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.1:35810214 chr01:035810214 0 W/35810214-35810214 FN1329-S Single Base Substitution C-A INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2230-S.SNP.1:35817899 chr01:035817899 0 W/35817899-35817899 FN2230-S SNP T -> C AC=1;AN=190;BQB=0.934611;DP=4961;DP4=2152,2444,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42896e-13;MQSB=0.768322;RPB=0.861848;SGB=131.065;VDB=0.789309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y207C|283|LOC_Os01g61890|protein_coding|CODING|LOC_Os01g61890.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y207C|283|LOC_Os01g61890|protein_coding|CODING|LOC_Os01g61890.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y207C|283|LOC_Os01g61890|protein_coding|CODING|LOC_Os01g61890.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y207C|283|LOC_Os01g61890|protein_coding|CODING|LOC_Os01g61890.1|2|1) FN2365.SNP.1:35826889 chr01:035826889 0 W/35826889-35826889 FN2365 SNP A -> G AC=1;AN=192;BQB=0.723955;DP=4935;DP4=2191,2288,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.72739e-13;MQSB=0.64929;RPB=0.872653;SGB=-43.1695;VDB=0.866241;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.1:35829762 chr01:035829762 0 W/35829762-35829762 FN4016-S SNP A -> T AC=2;AN=168;BQB=0.927175;DP=2764;DP4=1345,1245,16,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.27129e-16;MQSB=0.991887;RPB=0.20948;SGB=75.6627;VDB=0.86227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.1:35831596 chr01:035831596 0 W/35831596-35831596 FN1467-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN702-S.SNP.1:35837142 chr01:035837142 0 W/35837142-35837142 FN702-S Single Base Substitution A-T INTERGENIC HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2085-S.SNP.1:35841081 chr01:035841081 0 W/35841081-35841081 FN2085-S SNP T -> C AC=2;AN=168;BQB=0.411316;DP=3015;DP4=1861,1096,18,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.44683e-19;MQSB=0.201513;RPB=0.626091;SGB=-48.6118;VDB=0.472477;EFF=UTR_3_PRIME(MODIFIER||147||103|LOC_Os01g61920|protein_coding|CODING|LOC_Os01g61920.1|1|1) FN1916.SNP.1:35842716 chr01:035842716 0 W/35842716-35842716 FN1916 Single Base Substitution C-T HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1720-S.SNP.1:35843453 chr01:035843453 0 W/35843453-35843453 FN1720-S SNP C -> T AC=1;AN=188;BQB=0.969839;DP=1530;DP4=910,585,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27756e-05;MQSB=0.94358;RPB=0.259158;SGB=25.3545;VDB=0.587338;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.1:35843641 chr01:035843641 0 W/35843641-35843641 FN2477 SNP C -> T AC=1;AN=200;BQB=0.85897;DP=3991;DP4=1635,2157,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34672e-06;MQSB=0.46417;RPB=0.996022;SGB=25.849;VDB=0.882989;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.1:35847306 chr01:035847306 0 W/35847306-35847306 FN4101-S SNP T -> A AC=1;AN=182;BQB=0.988191;DP=2737;DP4=1346,1324,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.55989e-09;MQSB=0.996017;RPB=0.701441;SGB=42.6494;VDB=0.147748;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S43T|914|LOC_Os01g61930|protein_coding|CODING|LOC_Os01g61930.1|2|1) FN4101-S.SNP.1:35847307 chr01:035847307 0 W/35847307-35847307 FN4101-S SNP C -> A AC=1;AN=182;BQB=0.964387;DP=2742;DP4=1353,1321,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.51168e-09;MQSB=0.994962;RPB=0.652686;SGB=57.644;VDB=0.130645;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S43*|914|LOC_Os01g61930|protein_coding|CODING|LOC_Os01g61930.1|2|1);LOF=(LOC_Os01g61930|LOC_Os01g61930|1|1.00);NMD=(LOC_Os01g61930|LOC_Os01g61930|1|1.00) FN1285-S.SNP.1:35866051 chr01:035866051 0 W/35866051-35866051 FN1285-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1115-S.SNP.1:35867631 chr01:035867631 0 W/35867631-35867631 FN1115-S Single Base Substitution G-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3784-S.SNP.1:35879903 chr01:035879903 0 W/35879903-35879903 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.942057;DP=2620;DP4=1321,1201,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.1495e-08;MQSB=0.990561;RPB=0.971416;SGB=58.2031;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.1:35902994 chr01:035902994 0 W/35902994-35902994 FN502-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN1506-S.SNP.1:35910261 chr01:035910261 0 W/35910261-35910261 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN451-S.SNP.1:35928555 chr01:035928555 0 W/35928555-35928555 FN451-S Single Base Substitution G-A INTRON HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN917-S.SNP.1:35933017 chr01:035933017 0 W/35933017-35933017 FN917-S Single Base Substitution C-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN888-S.SNP.1:35933576 chr01:035933576 0 W/35933576-35933576 FN888-S Single Base Substitution T-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1358-S.SNP.1:35934935 chr01:035934935 0 W/35934935-35934935 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN453-S.SNP.1:35938666 chr01:035938666 0 W/35938666-35938666 FN453-S Single Base Substitution G-A INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN4128-S.SNP.1:35941627 chr01:035941627 0 W/35941627-35941627 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.983287;DP=2983;DP4=1465,1450,11,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.73501e-09;MQSB=0.0133994;RPB=0.458271;SGB=62.1548;VDB=0.118547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R177C|1802|LOC_Os01g62100|protein_coding|CODING|LOC_Os01g62100.1|5|1) FN-37.SNP.1:35945474 chr01:035945474 0 W/35945474-35945474 FN-37 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os01g62100 retrotransposon protein, putative, unclassified, expressed SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN3440-S.SNP.1:35948615 chr01:035948615 0 W/35948615-35948615 FN3440-S SNP T -> A AC=1;AN=184;BQB=0.527967;DP=2385;DP4=1260,1037,11,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.22804e-16;MQSB=0.145173;RPB=0.030885;SGB=61.1019;VDB=0.788365;EFF=INTRON(MODIFIER||||1802|LOC_Os01g62100|protein_coding|CODING|LOC_Os01g62100.1|19|1) FN2572-S.SNP.1:35960102 chr01:035960102 0 W/35960102-35960102 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.18516;DP=4634;DP4=2487,1913,23,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.92312e-23;MQSB=0.945876;RPB=0.266325;SGB=155.193;VDB=0.714364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.1:35960102 chr01:035960102 0 W/35960102-35960102 FN2572-S Single Base Substitution A-G INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3715-S.SNP.1:35960229 chr01:035960229 0 W/35960229-35960229 FN3715-S SNP G -> A AC=2;AN=190;BQB=0.999668;DP=2953;DP4=1342,1445,22,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.45807e-23;MQSB=0.912586;RPB=0.736404;SGB=142.717;VDB=0.785671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.1:35972575 chr01:035972575 0 W/35972575-35972575 FN2794-S SNP T -> C AC=1;AN=198;BQB=0.991662;DP=4088;DP4=1793,2130,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0408513;MQB=0.982706;MQSB=6.20361e-07;RPB=0.945423;SGB=32.9588;VDB=0.0924411;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.1:35973959 chr01:035973959 0 W/35973959-35973959 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN824-S.SNP.1:35988905 chr01:035988905 0 W/35988905-35988905 FN824-S Single Base Substitution T-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN-222.SNP.1:35990253 chr01:035990253 0 W/35990253-35990253 FN-222 Single Base Substitution T-C INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3322-S.SNP.1:35991791 chr01:035991791 0 W/35991791-35991791 FN3322-S SNP G -> A AC=1;AN=184;BQB=0.842369;DP=2087;DP4=734,1182,1,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00129375;MQSB=0.187864;RPB=0.999704;SGB=21.6146;VDB=0.733112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.1:36015481 chr01:036015481 0 W/36015481-36015481 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.673827;DP=4518;DP4=2064,2161,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24376e-07;MQSB=0.908474;RPB=0.888814;SGB=49.0954;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.1:36017094 chr01:036017094 0 W/36017094-36017094 FN1536-S Single Base Substitution G-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN459-S.SNP.1:36020877 chr01:036020877 0 W/36020877-36020877 FN459-S Single Base Substitution T-C INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN997-S.SNP.1:36024486 chr01:036024486 0 W/36024486-36024486 FN997-S Single Base Substitution T-C INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN500-S.SNP.1:36024899 chr01:036024899 0 W/36024899-36024899 FN500-S Single Base Substitution C-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-356.SNP.1:36029134 chr01:036029134 0 W/36029134-36029134 FN-356 Single Base Substitution A-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-170.SNP.1:36032230 chr01:036032230 0 W/36032230-36032230 FN-170 Single Base Substitution A-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN2779-S.SNP.1:36034607 chr01:036034607 0 W/36034607-36034607 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.00158727;DP=3700;DP4=1754,1534,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=4.18175e-06;MQSB=0.176336;RPB=0.0657815;SGB=-137.65;VDB=0.695393;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.1:36035126 chr01:036035126 0 W/36035126-36035126 FN4011-S SNP T -> C AC=1;AN=168;BQB=0.965557;DP=2942;DP4=1470,1325,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.47776e-11;MQSB=0.748647;RPB=0.987603;SGB=31.908;VDB=0.420125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.1:36036711 chr01:036036711 0 W/36036711-36036711 FN1619-S Single Base Substitution T-C INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3897-S.SNP.1:36040411 chr01:036040411 0 W/36040411-36040411 FN3897-S SNP T -> C AC=1;AN=158;BQB=0.661644;DP=2606;DP4=1126,1380,12,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.70096e-12;MQSB=0.993259;RPB=0.987913;SGB=81.2457;VDB=0.678293;EFF=INTRON(MODIFIER||||648|LOC_Os01g62290|protein_coding|CODING|LOC_Os01g62290.1|1|1),INTRON(MODIFIER||||614|LOC_Os01g62290|protein_coding|CODING|LOC_Os01g62290.2|1|1) FN-231.SNP.1:36046113 chr01:036046113 0 W/36046113-36046113 FN-231 Single Base Substitution C-T INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-350.SNP.1:36048549 chr01:036048549 0 W/36048549-36048549 FN-350 Single Base Substitution G-C INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1579-S.SNP.1:36053478 chr01:036053478 0 W/36053478-36053478 FN1579-S Single Base Substitution C-T INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2123-S.SNP.1:36057004 chr01:036057004 0 W/36057004-36057004 FN2123-S SNP A -> T AC=2;AN=168;BQB=0.999928;DP=3261;DP4=1520,1638,33,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.22612e-28;MQSB=0.826746;RPB=0.998427;SGB=-18.2387;VDB=0.954375;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.1:36065994 chr01:036065994 0 W/36065994-36065994 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3760-S.SNP.1:36067551 chr01:036067551 0 W/36067551-36067551 FN3760-S SNP G -> A AC=1;AN=190;BQB=0.981996;DP=2600;DP4=1296,1213,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00153846;MQB=2.54982e-06;MQSB=0.204096;RPB=0.999885;SGB=28.9929;VDB=0.24616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.1:36075788 chr01:036075788 0 W/36075788-36075788 FN1734-S SNP G -> A AC=1;AN=188;BQB=0.0159122;DP=3302;DP4=1624,1625,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00138521;MQSB=0.824381;RPB=0.992206;SGB=-131.06;VDB=0.830989;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.1:36083293 chr01:036083293 0 W/36083293-36083293 FN3998-S SNP G -> A AC=1;AN=168;BQB=0.983039;DP=2912;DP4=1374,1429,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.79723e-05;MQSB=0.99105;RPB=0.679016;SGB=17.5943;VDB=0.585032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S102F|110|LOC_Os01g62350|protein_coding|CODING|LOC_Os01g62350.1|4|1),SPLICE_SITE_REGION(LOW||||110|LOC_Os01g62350|protein_coding|CODING|LOC_Os01g62350.1|4|1) FN1523-S.SNP.1:36085828 chr01:036085828 0 W/36085828-36085828 FN1523-S Single Base Substitution G-C INTERGENIC Homo SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1460-S.SNP.1:36086947 chr01:036086947 0 W/36086947-36086947 FN1460-S Single Base Substitution G-A INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2235-S.SNP.1:36098883 chr01:036098883 0 W/36098883-36098883 FN2235-S SNP A -> G AC=1;AN=190;BQB=0.607251;DP=4603;DP4=2161,2040,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79164e-06;MQSB=0.549201;RPB=0.732346;SGB=32.5467;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.1:36102929 chr01:036102929 0 W/36102929-36102929 FN2301 SNP A -> G AC=2;AN=192;BQB=0.832683;DP=5035;DP4=2754,1977,17,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.56171e-18;MQSB=0.995074;RPB=0.976625;SGB=75.0722;VDB=0.952776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V427A|427|LOC_Os01g62380|protein_coding|CODING|LOC_Os01g62380.1|1|1),INTRON(MODIFIER||||415|LOC_Os01g62380|protein_coding|CODING|LOC_Os01g62380.2|1|1) FN-341.SNP.1:36107872 chr01:036107872 0 W/36107872-36107872 FN-341 Single Base Substitution A-T INTRON HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN859-S.SNP.1:36117021 chr01:036117021 0 W/36117021-36117021 FN859-S Single Base Substitution C-G INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN-164.SNP.1:36117482 chr01:036117482 0 W/36117482-36117482 FN-164 Single Base Substitution G-A INTRON HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2496.SNP.1:36121606 chr01:036121606 0 W/36121606-36121606 FN2496 SNP G -> C AC=1;AN=200;BQB=0.270693;DP=4407;DP4=2234,1900,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.2701e-10;MQSB=0.997898;RPB=0.695366;SGB=43.8747;VDB=0.360072;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.1:36144624 chr01:036144624 0 W/36144624-36144624 FN-104 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g62440 ribonuclease protein, putative, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3285-S.SNP.1:36151124 chr01:036151124 0 W/36151124-36151124 FN3285-S SNP A -> G AC=1;AN=184;BQB=0.852739;DP=2954;DP4=1284,1510,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90994e-09;MQSB=0.881955;RPB=0.705018;SGB=57.786;VDB=0.812925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.1:36157651 chr01:036157651 0 W/36157651-36157651 FN1644-S Single Base Substitution C-A INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3665-S.SNP.1:36172219 chr01:036172219 0 W/36172219-36172219 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.992491;DP=2097;DP4=541,1449,3,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07223e-11;MQSB=0.00040546;RPB=0.864841;SGB=64.5316;VDB=0.997181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.1:36175115 chr01:036175115 0 W/36175115-36175115 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.653495;DP=5787;DP4=3418,2073,18,33;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0960774;MQB=0.0190879;MQSB=0;RPB=0.94846;SGB=-160.372;VDB=0.00201549;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.1:36177170 chr01:036177170 0 W/36177170-36177170 FN1115-S Single Base Substitution A-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1261-S.SNP.1:36191022 chr01:036191022 0 W/36191022-36191022 FN1261-S Single Base Substitution G-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-187.SNP.1:36193765 chr01:036193765 0 W/36193765-36193765 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-187.SNP.1:36195989 chr01:036195989 0 W/36195989-36195989 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2650-S.SNP.1:36199748 chr01:036199748 0 W/36199748-36199748 FN2650-S SNP G -> C AC=2;AN=200;BQB=0.999998;DP=4928;DP4=2686,1974,26,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.78082e-25;MQSB=0.947464;RPB=0.992604;SGB=201.63;VDB=0.913547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.1:36203491 chr01:036203491 0 W/36203491-36203491 FN3885-S SNP C -> T AC=1;AN=158;BQB=0.973636;DP=2546;DP4=1303,1155,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.13619e-10;MQSB=0.999837;RPB=0.202246;SGB=86.3921;VDB=0.975005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.1:36206396 chr01:036206396 0 W/36206396-36206396 FN3994-S SNP T -> A AC=1;AN=168;BQB=0.996974;DP=2245;DP4=1050,1050,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00400891;MQB=1.39763e-05;MQSB=0.232533;RPB=0.689485;SGB=47.7421;VDB=0.311902;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.1:36209468 chr01:036209468 0 W/36209468-36209468 FN973-S Single Base Substitution G-A SPLICE_SITE_ACCEPTOR HET LOC_Os01g62520 retrotransposon protein, putative, unclassified SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2485.SNP.1:36211166 chr01:036211166 0 W/36211166-36211166 FN2485 SNP A -> G AC=1;AN=200;BQB=0.999901;DP=4633;DP4=1991,2311,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.50695e-12;MQSB=0.3241;RPB=0.495128;SGB=100.316;VDB=0.225708;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.1:36212050 chr01:036212050 0 W/36212050-36212050 FN737-S Single Base Substitution T-C INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN468-S.SNP.1:36215060 chr01:036215060 0 W/36215060-36215060 FN468-S Single Base Substitution T-G INTRON HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3845-S.SNP.1:36218662 chr01:036218662 0 W/36218662-36218662 FN3845-S SNP A -> T AC=1;AN=190;BQB=0.817033;DP=2525;DP4=1544,800,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000175759;MQSB=0.643145;RPB=0.427794;SGB=25.439;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.1:36218892 chr01:036218892 0 W/36218892-36218892 FN1423-S Single Base Substitution T-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN989-S.SNP.1:36224756 chr01:036224756 0 W/36224756-36224756 FN989-S Single Base Substitution T-C INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2558-S.SNP.1:36232799 chr01:036232799 0 W/36232799-36232799 FN2558-S SNP C -> G AC=1;AN=198;BQB=0.837906;DP=3424;DP4=1688,1483,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.63127e-07;MQSB=0.845734;RPB=0.432649;SGB=72.5245;VDB=0.433477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H165D|325|LOC_Os01g62584|protein_coding|CODING|LOC_Os01g62584.1|3|1) FN1719-S.SNP.1:36234889 chr01:036234889 0 W/36234889-36234889 FN1719-S SNP A -> T AC=2;AN=188;BQB=0.17405;DP=2753;DP4=1788,924,23,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79726e-14;MQSB=0.97539;RPB=0.762761;SGB=-80.8397;VDB=0.915697;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.1:36238679 chr01:036238679 0 W/36238679-36238679 FN457-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3730-S.SNP.1:36243310 chr01:036243310 0 W/36243310-36243310 FN3730-S SNP C -> A AC=1;AN=188;BQB=0.291475;DP=3270;DP4=1561,1512,24,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000917431;MQB=4.01658e-17;MQSB=0.808315;RPB=0.726141;SGB=-2.69832;VDB=0.658692;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.1:36245215 chr01:036245215 0 W/36245215-36245215 FN3482-S SNP C -> A AC=2;AN=184;BQB=0.97927;DP=2572;DP4=1272,1213,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.12645e-14;MQSB=0.99985;RPB=0.641315;SGB=107.526;VDB=0.269991;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.1:36245342 chr01:036245342 0 W/36245342-36245342 FN_935-1 Single Base Substitution C-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN454-S.SNP.1:36248039 chr01:036248039 0 W/36248039-36248039 FN454-S Single Base Substitution C-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3565-S.SNP.1:36249357 chr01:036249357 0 W/36249357-36249357 FN3565-S SNP C -> T AC=1;AN=188;BQB=0.470661;DP=2927;DP4=1666,1160,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00170823;MQB=7.47745e-08;MQSB=0.85047;RPB=0.960317;SGB=64.3306;VDB=0.382821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.1:36257661 chr01:036257661 0 W/36257661-36257661 FN-392 Single Base Substitution A-T UTR_3_PRIME HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2765-S.SNP.1:36263939 chr01:036263939 0 W/36263939-36263939 FN2765-S SNP A -> G AC=1;AN=198;BQB=0.951424;DP=4155;DP4=1894,2015,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.71394e-05;MQSB=0.909546;RPB=0.70278;SGB=21.559;VDB=0.988006;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.1:36276400 chr01:036276400 0 W/36276400-36276400 FN466-S Single Base Substitution A-C INTERGENIC HOMO SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-155.SNP.1:36282701 chr01:036282701 0 W/36282701-36282701 FN-155 Single Base Substitution T-A INTRON HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN457-S.SNP.1:36283102 chr01:036283102 0 W/36283102-36283102 FN457-S Single Base Substitution C-A STOP_GAINED HET LOC_Os01g62650 pumilio-family RNA binding protein, putative, expressed SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN967-S.SNP.1:36284638 chr01:036284638 0 W/36284638-36284638 FN967-S Single Base Substitution T-A INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN967-S.SNP.1:36284649 chr01:036284649 0 W/36284649-36284649 FN967-S Single Base Substitution T-C INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN-301.SNP.1:36292671 chr01:036292671 0 W/36292671-36292671 FN-301 Single Base Substitution A-T INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1505-S.SNP.1:36293327 chr01:036293327 0 W/36293327-36293327 FN1505-S Single Base Substitution T-C INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2310.SNP.1:36294000 chr01:036294000 0 W/36294000-36294000 FN2310 SNP G -> A AC=2;AN=192;BQB=0.997243;DP=4854;DP4=2237,2322,27,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.93063e-33;MQSB=0.970917;RPB=0.831419;SGB=8.3696;VDB=0.14779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.1:36296449 chr01:036296449 0 W/36296449-36296449 FN1440-S Single Base Substitution A-T INTRON HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2550-S.SNP.1:36298883 chr01:036298883 0 W/36298883-36298883 FN2550-S SNP G -> T AC=1;AN=198;BQB=0.99994;DP=2956;DP4=994,1631,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000711354;MQSB=0.998335;RPB=0.848538;SGB=-6.60145;VDB=0.471462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.1:36308063 chr01:036308063 0 W/36308063-36308063 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.924395;DP=2579;DP4=1538,992,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7218e-09;MQSB=0.957443;RPB=0.925731;SGB=11.7114;VDB=0.355601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.1:36308186 chr01:036308186 0 W/36308186-36308186 FN2246-S SNP G -> T AC=1;AN=190;BQB=0.957341;DP=4739;DP4=2250,2272,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17473e-09;MQSB=0.40775;RPB=0.917705;SGB=43.2083;VDB=0.486663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.1:36308187 chr01:036308187 0 W/36308187-36308187 FN2246-S SNP T -> G AC=1;AN=190;BQB=0.820219;DP=4738;DP4=2130,2253,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.51276e-07;MQSB=0.392282;RPB=0.561978;SGB=5.66499;VDB=0.65825;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.1:36308300 chr01:036308300 0 W/36308300-36308300 FN-206 Single Base Substitution G-A INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN1269-S.SNP.1:36310193 chr01:036310193 0 W/36310193-36310193 FN1269-S Single Base Substitution C-T INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1239-S.SNP.1:36315782 chr01:036315782 0 W/36315782-36315782 FN1239-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g62710 transposon protein, putative, unclassified SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN811-S.SNP.1:36316257 chr01:036316257 0 W/36316257-36316257 FN811-S Single Base Substitution G-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1103-S.SNP.1:36317936 chr01:036317936 0 W/36317936-36317936 FN1103-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g62720 GRF zinc finger family protein SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN893-S.SNP.1:36323420 chr01:036323420 0 W/36323420-36323420 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2667-S.SNP.1:36324589 chr01:036324589 0 W/36324589-36324589 FN2667-S SNP G -> C AC=1;AN=200;BQB=0.94284;DP=5004;DP4=2343,2336,8,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00059952;MQB=9.08556e-12;MQSB=0.339096;RPB=0.986872;SGB=42.5108;VDB=0.326482;EFF=UTR_3_PRIME(MODIFIER||57||119|LOC_Os01g62740|protein_coding|CODING|LOC_Os01g62740.1|2|1) FN3934-S.SNP.1:36329983 chr01:036329983 0 W/36329983-36329983 FN3934-S SNP T -> A AC=2;AN=158;BQB=0.974922;DP=2296;DP4=1064,1126,10,16;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=6.98507e-13;MQSB=0.0979433;RPB=0.837666;SGB=77.8763;VDB=0.806259;EFF=INTRON(MODIFIER||||422|LOC_Os01g62750|protein_coding|CODING|LOC_Os01g62750.1|3|1) FN-234.SNP.1:36337939 chr01:036337939 0 W/36337939-36337939 FN-234 Single Base Substitution C-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-293.SNP.1:36339905 chr01:036339905 0 W/36339905-36339905 FN-293 Single Base Substitution G-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN-364.SNP.1:36350361 chr01:036350361 0 W/36350361-36350361 FN-364 Single Base Substitution C-T INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2467.SNP.1:36357400 chr01:036357400 0 W/36357400-36357400 FN2467 SNP A -> T AC=2;AN=200;BQB=0.987507;DP=5032;DP4=2256,2407,29,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.1063e-30;MQSB=0.907739;RPB=0.962888;SGB=170.056;VDB=0.261311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K200N|408|LOC_Os01g62780|protein_coding|CODING|LOC_Os01g62780.1|7|1) FN1645-S.SNP.1:36357654 chr01:036357654 0 W/36357654-36357654 FN1645-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g62780 expressed protein SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1645-S.SNP.1:36357655 chr01:036357655 0 W/36357655-36357655 FN1645-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os01g62780 expressed protein SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1419-S.SNP.1:36366811 chr01:036366811 0 W/36366811-36366811 FN1419-S Single Base Substitution G-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1129-S.SNP.1:36372779 chr01:036372779 0 W/36372779-36372779 FN1129-S Single Base Substitution A-C INTRON HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN3510-S.SNP.1:36379336 chr01:036379336 0 W/36379336-36379336 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.989688;DP=3391;DP4=2157,1153,16,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.47954e-12;MQSB=0.932576;RPB=0.895779;SGB=80.782;VDB=0.113709;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.1:36381026 chr01:036381026 0 W/36381026-36381026 FN947-S Single Base Substitution G-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN947-S.SNP.1:36381030 chr01:036381030 0 W/36381030-36381030 FN947-S Single Base Substitution T-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN521-S.SNP.1:36381112 chr01:036381112 0 W/36381112-36381112 FN521-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2740-S.SNP.1:36384513 chr01:036384513 0 W/36384513-36384513 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.0526833;DP=5009;DP4=2386,2421,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20958e-14;MQSB=0.991795;RPB=0.922839;SGB=58.1418;VDB=0.342787;EFF=INTRON(MODIFIER||||510|LOC_Os01g62810|protein_coding|CODING|LOC_Os01g62810.1|9|1),INTRON(MODIFIER||||509|LOC_Os01g62810|protein_coding|CODING|LOC_Os01g62810.2|9|1),INTRON(MODIFIER||||254|LOC_Os01g62810|protein_coding|CODING|LOC_Os01g62810.3|6|1),INTRON(MODIFIER||||195|LOC_Os01g62810|protein_coding|CODING|LOC_Os01g62810.4|7|1) FN1124-S.SNP.1:36386565 chr01:036386565 0 W/36386565-36386565 FN1124-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g62820 Transcription initiation factor TFIID subunit A containing protein, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2476.SNP.1:36387224 chr01:036387224 0 W/36387224-36387224 FN2476 SNP T -> G AC=1;AN=200;BQB=0.992974;DP=5258;DP4=2603,2272,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.88433e-15;MQSB=0.920723;RPB=0.993782;SGB=30.3571;VDB=0.335821;EFF=INTRON(MODIFIER||||543|LOC_Os01g62820|protein_coding|CODING|LOC_Os01g62820.1|5|1),INTRON(MODIFIER||||542|LOC_Os01g62820|protein_coding|CODING|LOC_Os01g62820.2|5|1),INTRON(MODIFIER||||542|LOC_Os01g62820|protein_coding|CODING|LOC_Os01g62820.3|5|1) FN1035-S.SNP.1:36389864 chr01:036389864 0 W/36389864-36389864 FN1035-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g62820 Transcription initiation factor TFIID subunit A containing protein, expressed SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2349.SNP.1:36390855 chr01:036390855 0 W/36390855-36390855 FN2349 SNP G -> A AC=1;AN=192;BQB=0.553004;DP=4480;DP4=2293,1930,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.6374e-15;MQSB=0.60395;RPB=0.442681;SGB=-41.8626;VDB=0.964727;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.1:36395272 chr01:036395272 0 W/36395272-36395272 FN229-S Single Base Substitution A-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN982-S.SNP.1:36395870 chr01:036395870 0 W/36395870-36395870 FN982-S Single Base Substitution C-G UTR_5_PRIME HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN829-S.SNP.1:36396299 chr01:036396299 0 W/36396299-36396299 FN829-S Single Base Substitution C-T INTRON HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1550-S.SNP.1:36408456 chr01:036408456 0 W/36408456-36408456 FN1550-S Single Base Substitution G-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2161-S.SNP.1:36408575 chr01:036408575 0 W/36408575-36408575 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.760722;DP=2950;DP4=1558,1345,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.79185e-05;MQSB=0.979458;RPB=0.0616074;SGB=19.7539;VDB=0.508984;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.1:36412727 chr01:036412727 0 W/36412727-36412727 FN3947-S SNP A -> G AC=1;AN=168;BQB=0.940356;DP=2732;DP4=1250,1389,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.41343e-08;MQSB=0.997236;RPB=0.934703;SGB=19.7539;VDB=0.574694;EFF=INTRON(MODIFIER||||311|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.1|4|1),INTRON(MODIFIER||||237|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.2|1|1) FN3364-S.SNP.1:36413971 chr01:036413971 0 W/36413971-36413971 FN3364-S SNP T -> A AC=1;AN=184;BQB=0.949987;DP=3043;DP4=1467,1464,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59485e-06;MQSB=0.991818;RPB=0.987177;SGB=35.1773;VDB=0.752987;EFF=INTRON(MODIFIER||||311|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.1|6|1),INTRON(MODIFIER||||237|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.2|3|1) FN3364-S.SNP.1:36413972 chr01:036413972 0 W/36413972-36413972 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.910728;DP=3048;DP4=1467,1471,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.76584e-06;MQSB=0.999729;RPB=0.996878;SGB=30.6558;VDB=0.77747;EFF=INTRON(MODIFIER||||311|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.1|6|1),INTRON(MODIFIER||||237|LOC_Os01g62870|protein_coding|CODING|LOC_Os01g62870.2|3|1) FN982-S.SNP.1:36414279 chr01:036414279 0 W/36414279-36414279 FN982-S Single Base Substitution A-T INTRON HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN1009-S.SNP.1:36414607 chr01:036414607 0 W/36414607-36414607 FN1009-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3885-S.SNP.1:36417518 chr01:036417518 0 W/36417518-36417518 FN3885-S SNP G -> A AC=1;AN=158;BQB=0.992282;DP=2481;DP4=1036,1288,10,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.40038e-12;MQSB=0.934156;RPB=0.497691;SGB=61.029;VDB=0.240576;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.1:36423308 chr01:036423308 0 W/36423308-36423308 FN1568-S Single Base Substitution C-T INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1716-S.SNP.1:36424168 chr01:036424168 0 W/36424168-36424168 FN1716-S SNP G -> A AC=2;AN=188;BQB=0.00294796;DP=2494;DP4=879,1560,16,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54467e-13;MQSB=0.997238;RPB=0.206409;SGB=31.7742;VDB=0.513525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.1:36428938 chr01:036428938 0 W/36428938-36428938 FN1745-S SNP G -> A AC=2;AN=188;BQB=0.860986;DP=4049;DP4=2022,1950,17,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.52408e-18;MQSB=0.996228;RPB=0.472863;SGB=-150.315;VDB=0.394711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.1:36431578 chr01:036431578 0 W/36431578-36431578 FN1736-S SNP G -> A AC=1;AN=188;BQB=0.982192;DP=3062;DP4=2055,966,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.68327e-09;MQSB=0.695157;RPB=0.965072;SGB=10.1681;VDB=0.0326586;EFF=INTRON(MODIFIER||||735|LOC_Os01g62900|protein_coding|CODING|LOC_Os01g62900.1|1|1) FN3575-S.SNP.1:36436387 chr01:036436387 0 W/36436387-36436387 FN3575-S SNP A -> G AC=1;AN=188;BQB=0.952993;DP=2770;DP4=1167,1498,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72262e-12;MQSB=0.973208;RPB=0.704277;SGB=57.244;VDB=0.282914;EFF=INTRON(MODIFIER||||735|LOC_Os01g62900|protein_coding|CODING|LOC_Os01g62900.1|7|1) FN3663-S.SNP.1:36447297 chr01:036447297 0 W/36447297-36447297 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.375165;DP=2923;DP4=1272,1506,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47254e-05;MQSB=0.998217;RPB=0.142759;SGB=36.1006;VDB=0.691791;EFF=INTRON(MODIFIER||||612|LOC_Os01g62920|protein_coding|CODING|LOC_Os01g62920.1|2|1) FN3514-S.SNP.1:36452460 chr01:036452460 0 W/36452460-36452460 FN3514-S SNP T -> C AC=1;AN=188;BQB=0.97007;DP=3381;DP4=1534,1699,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33446e-13;MQSB=0.965998;RPB=0.746789;SGB=41.3359;VDB=0.299657;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.1:36457007 chr01:036457007 0 W/36457007-36457007 FN-195 Single Base Substitution G-A INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3782-S.SNP.1:36457828 chr01:036457828 0 W/36457828-36457828 FN3782-S SNP A -> G AC=1;AN=190;BQB=0.646292;DP=2822;DP4=1316,1379,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.23423e-14;MQSB=0.731548;RPB=0.961233;SGB=94.6341;VDB=0.109977;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.1:36461796 chr01:036461796 0 W/36461796-36461796 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.960007;DP=2488;DP4=1149,1261,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.72618e-06;MQSB=0.857265;RPB=0.30194;SGB=10.0307;VDB=0.623963;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.1:36469389 chr01:036469389 0 W/36469389-36469389 FN-196 Single Base Substitution A-G INTRON HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN949-S.SNP.1:36473766 chr01:036473766 0 W/36473766-36473766 FN949-S Single Base Substitution G-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN949-S.SNP.1:36473767 chr01:036473767 0 W/36473767-36473767 FN949-S Single Base Substitution T-G INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN1254-S.SNP.1:36488796 chr01:036488796 0 W/36488796-36488796 FN1254-S Single Base Substitution G-T INTRON HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN395-S.SNP.1:36493549 chr01:036493549 0 W/36493549-36493549 FN395-S Single Base Substitution C-T INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. W416-6-1.SNP.1:36495327 chr01:036495327 0 W/36495327-36495327 W416-6-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3371-S.SNP.1:36496707 chr01:036496707 0 W/36496707-36496707 FN3371-S SNP C -> T AC=2;AN=184;BQB=0.720934;DP=2920;DP4=1429,1378,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.65575e-14;MQSB=0.950683;RPB=0.998739;SGB=-41.4907;VDB=0.0809277;EFF=UTR_3_PRIME(MODIFIER||450||162|LOC_Os01g63010|protein_coding|CODING|LOC_Os01g63010.1|4|1) FN2083-S.SNP.1:36498695 chr01:036498695 0 W/36498695-36498695 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.975667;DP=3110;DP4=1833,1235,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.32998e-12;MQSB=0.999576;RPB=0.815818;SGB=39.2004;VDB=0.626175;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.1:36510792 chr01:036510792 0 W/36510792-36510792 FN951-S Single Base Substitution A-G INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN1485-S.SNP.1:36511140 chr01:036511140 0 W/36511140-36511140 FN1485-S Single Base Substitution A-G INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2260-S.SNP.1:36511307 chr01:036511307 0 W/36511307-36511307 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.0951596;DP=4447;DP4=2185,1949,18,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13579e-14;MQSB=0.952239;RPB=0.823717;SGB=89.4087;VDB=0.0392845;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.1:36517071 chr01:036517071 0 W/36517071-36517071 FN692-S Single Base Substitution C-A INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2376.SNP.1:36523333 chr01:036523333 0 W/36523333-36523333 FN2376 SNP G -> A AC=2;AN=192;BQB=0.739001;DP=4959;DP4=2221,2478,10,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.74783e-12;MQSB=0.992308;RPB=0.99428;SGB=51.9931;VDB=0.75347;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.1:36524177 chr01:036524177 0 W/36524177-36524177 FN-362 Single Base Substitution C-T INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN971-S.SNP.1:36530050 chr01:036530050 0 W/36530050-36530050 FN971-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2596-S.SNP.1:36530062 chr01:036530062 0 W/36530062-36530062 FN2596-S SNP T -> C AC=1;AN=198;BQB=0.298512;DP=4174;DP4=2280,1716,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.31932e-05;MQSB=0.98085;RPB=0.507372;SGB=44.9538;VDB=0.873154;EFF=UTR_3_PRIME(MODIFIER||500||363|LOC_Os01g63050|protein_coding|CODING|LOC_Os01g63050.1|5|1) FN2412.SNP.1:36547446 chr01:036547446 0 W/36547446-36547446 FN2412 SNP C -> T AC=1;AN=200;BQB=0.045834;DP=3629;DP4=1642,1349,9,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00275558;MQB=0.00143717;MQSB=1.34845e-05;RPB=0.98305;SGB=-110.301;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.1:36547538 chr01:036547538 0 W/36547538-36547538 FN3386-S SNP C -> T AC=1;AN=184;BQB=0.920032;DP=3976;DP4=1790,2073,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.220573;MQB=0.247835;MQSB=0;RPB=0.0438165;SGB=62.3078;VDB=0.211818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.1:36548485 chr01:036548485 0 W/36548485-36548485 FN1702-S SNP C -> A AC=2;AN=188;BQB=0.174321;DP=3359;DP4=1500,1817,15,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000893123;MQB=2.67185e-15;MQSB=0.999261;RPB=0.57325;SGB=-120.834;VDB=0.439541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E1600D|1667|LOC_Os01g63080|protein_coding|CODING|LOC_Os01g63080.1|8|1) FN-93.SNP.1:36552501 chr01:036552501 0 W/36552501-36552501 FN-93 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g63080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1682-S.SNP.1:36553653 chr01:036553653 0 W/36553653-36553653 FN1682-S SNP T -> G AC=1;AN=188;BQB=0.553255;DP=3619;DP4=2576,999,22,12;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0370268;MQB=0.00718341;MQSB=1.48316e-26;RPB=0.616059;SGB=-159.372;VDB=0.335305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cCt|H116P|1667|LOC_Os01g63080|protein_coding|CODING|LOC_Os01g63080.1|4|1) FN1035-S.SNP.1:36558286 chr01:036558286 0 W/36558286-36558286 FN1035-S Single Base Substitution G-A INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1035-S.SNP.1:36558287 chr01:036558287 0 W/36558287-36558287 FN1035-S Single Base Substitution C-A INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2484.SNP.1:36559549 chr01:036559549 0 W/36559549-36559549 FN2484 SNP G -> T AC=1;AN=200;BQB=0.790453;DP=4313;DP4=2060,1975,9,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000695572;MQB=1.00184e-09;MQSB=0.137439;RPB=0.810978;SGB=77.2904;VDB=0.532804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.1:36559550 chr01:036559550 0 W/36559550-36559550 FN2484 SNP C -> T AC=1;AN=200;BQB=0.305621;DP=4312;DP4=1988,1915,11,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000695733;MQB=3.36879e-10;MQSB=0.297434;RPB=0.761194;SGB=100.316;VDB=0.537902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.1:36559634 chr01:036559634 0 W/36559634-36559634 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.766292;DP=4761;DP4=2031,2454,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021004;MQB=1.39963e-16;MQSB=0.614746;RPB=0.250552;SGB=55.5366;VDB=0.381494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.1:36562249 chr01:036562249 0 W/36562249-36562249 FN3830-S SNP G -> T AC=1;AN=190;BQB=0.932798;DP=3212;DP4=1495,1603,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00280199;MQB=3.4401e-10;MQSB=0.0048591;RPB=0.900426;SGB=71.6393;VDB=0.867641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S139Y|519|LOC_Os01g63090|protein_coding|CODING|LOC_Os01g63090.1|1|1) FN3819-S.SNP.1:36565680 chr01:036565680 0 W/36565680-36565680 FN3819-S SNP G -> A AC=1;AN=190;BQB=0.17618;DP=2853;DP4=1481,1238,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00560813;MQB=0.317385;MQSB=0.933253;RPB=0.436745;SGB=35.4339;VDB=0.561963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A499T|1784|LOC_Os01g63100|protein_coding|CODING|LOC_Os01g63100.1|1|1) FN892-S.SNP.1:36566114 chr01:036566114 0 W/36566114-36566114 FN892-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1085-S.SNP.1:36569064 chr01:036569064 0 W/36569064-36569064 FN1085-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g63100 retrotransposon protein, putative, unclassified, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. W443-5-1-3.SNP.1:36572017 chr01:036572017 0 W/36572017-36572017 W443-5-1-3 Single Base Substitution T-A INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2715-S.SNP.1:36577128 chr01:036577128 0 W/36577128-36577128 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.787386;DP=4601;DP4=2170,2169,11,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000869376;MQB=1.62332e-09;MQSB=0.997932;RPB=0.759835;SGB=-9.47921;VDB=0.763751;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1157K|1435|LOC_Os01g63120|protein_coding|CODING|LOC_Os01g63120.1|1|1) FN3520-S.SNP.1:36577754 chr01:036577754 0 W/36577754-36577754 FN3520-S SNP T -> A AC=1;AN=188;BQB=0.884898;DP=2805;DP4=1473,1269,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30073e-09;MQSB=0.983314;RPB=0.957587;SGB=57.244;VDB=0.17227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cTt|H948L|1435|LOC_Os01g63120|protein_coding|CODING|LOC_Os01g63120.1|1|1) FN2440.SNP.1:36578099 chr01:036578099 0 W/36578099-36578099 FN2440 SNP C -> A AC=1;AN=200;BQB=0.883116;DP=4503;DP4=2179,2000,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29523e-12;MQSB=0.913707;RPB=0.996278;SGB=69.1109;VDB=0.413077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R833I|1435|LOC_Os01g63120|protein_coding|CODING|LOC_Os01g63120.1|1|1) FN837-S.SNP.1:36580311 chr01:036580311 0 W/36580311-36580311 FN837-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN837-S.SNP.1:36580312 chr01:036580312 0 W/36580312-36580312 FN837-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g63120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3896-S.SNP.1:36586329 chr01:036586329 0 W/36586329-36586329 FN3896-S SNP C -> A AC=1;AN=158;BQB=0.916737;DP=2497;DP4=1120,1305,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0480577;MQB=0.972059;MQSB=1.6365e-05;RPB=0.672674;SGB=33.9591;VDB=0.536808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.1:36586510 chr01:036586510 0 W/36586510-36586510 FN2445 SNP C -> A AC=1;AN=200;BQB=0.309182;DP=4296;DP4=1774,2272,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000931099;MQB=2.29611e-10;MQSB=0.266403;RPB=0.993652;SGB=37.3004;VDB=0.881453;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.1:36589028 chr01:036589028 0 W/36589028-36589028 FN499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g63150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4016-S.SNP.1:36591053 chr01:036591053 0 W/36591053-36591053 FN4016-S SNP A -> G AC=2;AN=168;BQB=0.999988;DP=3213;DP4=1734,1312,29,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.20929e-22;MQSB=0.999845;RPB=0.954557;SGB=95.1092;VDB=0.55003;EFF=INTRON(MODIFIER||||1516|LOC_Os01g63150|protein_coding|CODING|LOC_Os01g63150.1|6|1) FN2593-S.SNP.1:36592540 chr01:036592540 0 W/36592540-36592540 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.794844;DP=3816;DP4=1730,1867,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00104822;MQB=9.41204e-12;MQSB=0.75981;RPB=0.621472;SGB=55.2955;VDB=0.994329;EFF=INTRON(MODIFIER||||1516|LOC_Os01g63150|protein_coding|CODING|LOC_Os01g63150.1|5|1) FN3494-S.SNP.1:36594015 chr01:036594015 0 W/36594015-36594015 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.327092;DP=3947;DP4=2007,1736,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00253357;MQB=0.00455471;MQSB=0.000205584;RPB=0.809315;SGB=48.7425;VDB=0.775148;EFF=INTRON(MODIFIER||||1516|LOC_Os01g63150|protein_coding|CODING|LOC_Os01g63150.1|5|1) FN2683-S.SNP.1:36594298 chr01:036594298 0 W/36594298-36594298 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.983928;DP=4758;DP4=2074,2425,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210172;MQB=2.28629e-08;MQSB=0.030339;RPB=0.562805;SGB=54.6902;VDB=0.0554092;EFF=INTRON(MODIFIER||||1516|LOC_Os01g63150|protein_coding|CODING|LOC_Os01g63150.1|5|1) FN3821-S.SNP.1:36597313 chr01:036597313 0 W/36597313-36597313 FN3821-S SNP A -> G AC=1;AN=190;BQB=0.962731;DP=2793;DP4=1426,1270,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.93754e-07;MQSB=0.978448;RPB=0.192178;SGB=28.9929;VDB=0.470798;EFF=INTRON(MODIFIER||||1516|LOC_Os01g63150|protein_coding|CODING|LOC_Os01g63150.1|3|1) FN2339.SNP.1:36601723 chr01:036601723 0 W/36601723-36601723 FN2339 SNP T -> A AC=1;AN=192;BQB=0.462178;DP=5035;DP4=2545,2217,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.41044e-10;MQSB=0.981377;RPB=0.460308;SGB=18.3052;VDB=0.0975474;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.1:36603759 chr01:036603759 0 W/36603759-36603759 FN3863-S SNP G -> T AC=1;AN=158;BQB=0.414808;DP=2551;DP4=1209,1191,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.9201e-06;MQSB=0.980166;RPB=0.945007;SGB=2.08615;VDB=0.63814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.1:36610067 chr01:036610067 0 W/36610067-36610067 FN-353 Single Base Substitution C-T INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-183.SNP.1:36620280 chr01:036620280 0 W/36620280-36620280 FN-183 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g63180 laccase-6 precursor, putative, expressed SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN1678-S.SNP.1:36623301 chr01:036623301 0 W/36623301-36623301 FN1678-S SNP T -> C AC=1;AN=188;BQB=0.0207674;DP=3729;DP4=1944,1743,6,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.41694e-09;MQSB=0.899986;RPB=0.990764;SGB=-39.6481;VDB=0.934958;EFF=INTRON(MODIFIER||||559|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.1|1|1),INTRON(MODIFIER||||516|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.3|1|1) FN2268-S.SNP.1:36624220 chr01:036624220 0 W/36624220-36624220 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.999384;DP=4988;DP4=2274,2441,21,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.54773e-23;MQSB=0.948352;RPB=0.242163;SGB=132.055;VDB=0.365234;EFF=INTRON(MODIFIER||||559|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.1|2|1),INTRON(MODIFIER||||516|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.3|2|1) FN2268-S.SNP.1:36624228 chr01:036624228 0 W/36624228-36624228 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.44498;DP=4969;DP4=2231,2370,21,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.70523e-23;MQSB=0.965698;RPB=0.871928;SGB=-0.482811;VDB=0.436173;EFF=INTRON(MODIFIER||||559|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.1|2|1),INTRON(MODIFIER||||516|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.3|2|1) FN4047-S.SNP.1:36625302 chr01:036625302 0 W/36625302-36625302 FN4047-S SNP C -> T AC=2;AN=168;BQB=0.360271;DP=2883;DP4=1226,1553,7,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.83391e-08;MQSB=0.905524;RPB=0.995755;SGB=29.4772;VDB=0.485011;EFF=INTRON(MODIFIER||||559|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.1|2|1),INTRON(MODIFIER||||516|LOC_Os01g63190|protein_coding|CODING|LOC_Os01g63190.3|2|1) FN3394-S.SNP.1:36630889 chr01:036630889 0 W/36630889-36630889 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.525844;DP=3521;DP4=1826,1580,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000219288;MQSB=0.938891;RPB=0.906402;SGB=6.80232;VDB=0.650332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.1:36633408 chr01:036633408 0 W/36633408-36633408 FN-106 Single Base Substitution C-T INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN-120.SNP.1:36639161 chr01:036639161 0 W/36639161-36639161 FN-120 Single Base Substitution C-A INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN456-S.SNP.1:36646900 chr01:036646900 0 W/36646900-36646900 FN456-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2411.SNP.1:36652410 chr01:036652410 0 W/36652410-36652410 FN2411 SNP G -> T AC=1;AN=200;BQB=0.85432;DP=4925;DP4=2346,2240,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32428e-13;MQSB=0.765413;RPB=0.376086;SGB=-38.4742;VDB=0.338612;EFF=UTR_3_PRIME(MODIFIER||223||203|LOC_Os01g63240|protein_coding|CODING|LOC_Os01g63240.1|4|1) FN-174.SNP.1:36664882 chr01:036664882 0 W/36664882-36664882 FN-174 Single Base Substitution C-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1651-S.SNP.1:36675508 chr01:036675508 0 W/36675508-36675508 FN1651-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g63270 alpha-glucan phosphorylast isozyme, putative, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN418-S.SNP.1:36680017 chr01:036680017 0 W/36680017-36680017 FN418-S Single Base Substitution C-T INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1047-S.SNP.1:36681689 chr01:036681689 0 W/36681689-36681689 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN405-S.SNP.1:36682428 chr01:036682428 0 W/36682428-36682428 FN405-S Single Base Substitution T-G INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN405-S.SNP.1:36685207 chr01:036685207 0 W/36685207-36685207 FN405-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1627-S.SNP.1:36687250 chr01:036687250 0 W/36687250-36687250 FN1627-S Single Base Substitution T-G INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3830-S.SNP.1:36695200 chr01:036695200 0 W/36695200-36695200 FN3830-S SNP G -> T AC=1;AN=190;BQB=0.0893606;DP=2035;DP4=683,1284,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000194199;MQSB=0.732044;RPB=0.998394;SGB=53.6492;VDB=0.437876;EFF=INTRON(MODIFIER||||353|LOC_Os01g63290|protein_coding|CODING|LOC_Os01g63290.2|1|1) FN2629-S.SNP.1:36699540 chr01:036699540 0 W/36699540-36699540 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.888879;DP=4643;DP4=2161,2238,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.57493e-14;MQSB=0.913775;RPB=0.79587;SGB=83.5316;VDB=0.270287;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.1:36700122 chr01:036700122 0 W/36700122-36700122 FN627-S Single Base Substitution T-C INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN451-S.SNP.1:36704508 chr01:036704508 0 W/36704508-36704508 FN451-S Single Base Substitution C-T INTRON HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2680-S.SNP.1:36704942 chr01:036704942 0 W/36704942-36704942 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.923933;DP=4625;DP4=2154,2203,13,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0012973;MQB=9.36471e-14;MQSB=0.00380478;RPB=0.947149;SGB=83.5316;VDB=0.479418;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q45|212|LOC_Os01g63320|protein_coding|CODING|LOC_Os01g63320.1|1|1) FN1738-S.SNP.1:36731244 chr01:036731244 0 W/36731244-36731244 FN1738-S SNP C -> T AC=1;AN=188;BQB=0.248483;DP=2633;DP4=1586,1005,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.14812;MQB=0.386112;MQSB=4.63342e-30;RPB=0.926605;SGB=-35.5377;VDB=0.138479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.1:36731385 chr01:036731385 0 W/36731385-36731385 FN1192-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN4275-S.SNP.1:36736241 chr01:036736241 0 W/36736241-36736241 FN4275-S SNP A -> G AC=1;AN=170;BQB=0.824598;DP=2365;DP4=1245,985,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.77767e-07;MQSB=0.995147;RPB=0.594326;SGB=31.4354;VDB=0.423076;EFF=STOP_LOST(HIGH|MISSENSE|Tga/Cga|*261R|260|LOC_Os01g63410|protein_coding|CODING|LOC_Os01g63410.1|2|1),INTRON(MODIFIER||||703|LOC_Os01g63400|protein_coding|CODING|LOC_Os01g63400.1|1|1),INTRON(MODIFIER||||703|LOC_Os01g63400|protein_coding|CODING|LOC_Os01g63400.2|1|1) FN1642-S.SNP.1:36740071 chr01:036740071 0 W/36740071-36740071 FN1642-S Single Base Substitution A-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2780-S.SNP.1:36740767 chr01:036740767 0 W/36740767-36740767 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.990903;DP=3981;DP4=2103,1629,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.56261e-07;MQSB=0.0431291;RPB=0.921615;SGB=-35.8307;VDB=0.833966;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.1:36741869 chr01:036741869 0 W/36741869-36741869 FN793-S Single Base Substitution A-G INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3491-S.SNP.1:36742442 chr01:036742442 0 W/36742442-36742442 FN3491-S SNP A -> G AC=1;AN=188;BQB=0.994207;DP=2447;DP4=899,1343,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.22665e-06;MQSB=0.565407;RPB=0.643623;SGB=28.8977;VDB=0.261569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.1:36752482 chr01:036752482 0 W/36752482-36752482 FN2480 SNP T -> C AC=2;AN=200;BQB=0.986095;DP=4876;DP4=2075,2353,26,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.9466e-27;MQSB=0.999768;RPB=0.405254;SGB=54.4347;VDB=0.316957;EFF=INTRON(MODIFIER||||220|LOC_Os01g63430|protein_coding|CODING|LOC_Os01g63430.1|3|1) FN4161-S.SNP.1:36755587 chr01:036755587 0 W/36755587-36755587 FN4161-S SNP A -> T AC=1;AN=170;BQB=0.751507;DP=2549;DP4=1109,1337,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.31888e-05;MQSB=0.998139;RPB=0.691743;SGB=43.4296;VDB=0.938014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.1:36757344 chr01:036757344 0 W/36757344-36757344 FN1634-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g63444 expressed protein SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN-192.SNP.1:36758465 chr01:036758465 0 W/36758465-36758465 FN-192 Single Base Substitution A-C UTR_3_PRIME HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN-148.SNP.1:36765744 chr01:036765744 0 W/36765744-36765744 FN-148 Single Base Substitution T-C INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2407.SNP.1:36778035 chr01:036778035 0 W/36778035-36778035 FN2407 SNP G -> T AC=1;AN=200;BQB=0.477032;DP=4489;DP4=1982,2255,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07224e-12;MQSB=0.802349;RPB=0.985256;SGB=69.1109;VDB=0.562078;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.1:36779460 chr01:036779460 0 W/36779460-36779460 FN-105 Single Base Substitution T-A INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2299.SNP.1:36781634 chr01:036781634 0 W/36781634-36781634 FN2299 SNP G -> A AC=1;AN=192;BQB=0.932953;DP=5168;DP4=2196,2559,4,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.20357e-08;MQSB=0.999978;RPB=0.99418;SGB=-58.7582;VDB=0.544883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.1:36782851 chr01:036782851 0 W/36782851-36782851 FN2794-S SNP T -> C AC=2;AN=198;BQB=0.964435;DP=3817;DP4=1821,1372,30,20;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.60521e-19;MQSB=0.787741;RPB=0.505612;SGB=159.455;VDB=0.17334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.1:36782993 chr01:036782993 0 W/36782993-36782993 FN4009-S SNP T -> C AC=1;AN=168;BQB=0.821203;DP=2586;DP4=1277,1139,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000878956;MQSB=0.806708;RPB=0.952515;SGB=7.59999;VDB=0.868432;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.1:36783561 chr01:036783561 0 W/36783561-36783561 FN4110-S SNP C -> T AC=2;AN=182;BQB=0.745598;DP=3169;DP4=1196,1865,11,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.25731e-17;MQSB=0.14095;RPB=0.974905;SGB=98.8232;VDB=0.687324;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.1:36783562 chr01:036783562 0 W/36783562-36783562 FN4110-S SNP G -> T AC=2;AN=182;BQB=0.950588;DP=3157;DP4=1178,1846,12,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.64352e-19;MQSB=0.102896;RPB=0.999903;SGB=98.8232;VDB=0.586895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.1:36791686 chr01:036791686 0 W/36791686-36791686 FN1384-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1300-S.SNP.1:36792240 chr01:036792240 0 W/36792240-36792240 FN1300-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3810-S.SNP.1:36798310 chr01:036798310 0 W/36798310-36798310 FN3810-S SNP T -> A AC=1;AN=190;BQB=0.814501;DP=2578;DP4=1078,1426,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00023584;MQSB=0.897545;RPB=0.707429;SGB=25.439;VDB=0.794525;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.1:36799627 chr01:036799627 0 W/36799627-36799627 FN4052-S SNP A -> T AC=1;AN=168;BQB=0.488994;DP=2657;DP4=1289,1272,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03872e-05;MQSB=0.943386;RPB=0.477232;SGB=56.6036;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.1:36801536 chr01:036801536 0 W/36801536-36801536 FN504-S Single Base Substitution G-A INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. 701-1.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. 701-2.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1436, Mutant_ID: 701-2, Generation: M2, Mutations: 21, Genes: 34, Seed availability: Yes. 701-3.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-3 Single Base Substitution G-A INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-4.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-4 Single Base Substitution G-A INTERGENIC Homo SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. 701-5.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-5 Single Base Substitution G-A INTERGENIC HET SNo: 1439, Mutant_ID: 701-5, Generation: M2, Mutations: 18, Genes: 7, Seed availability: Yes. 701-6.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. 701-7.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-7 Single Base Substitution G-A INTERGENIC Homo SNo: 1441, Mutant_ID: 701-7, Generation: M2, Mutations: 28, Genes: 9, Seed availability: Yes. 701-8.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 701-8 Single Base Substitution G-A INTERGENIC Homo SNo: 1442, Mutant_ID: 701-8, Generation: M2, Mutations: 20, Genes: 7, Seed availability: Yes. FN1442-S.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 FN1442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3343-S.SNP.1:36804635 chr01:036804635 0 W/36804635-36804635 FN3343-S SNP G -> A AC=2;AN=184;BQB=0.960933;DP=3463;DP4=1392,1958,8,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.07759e-18;MQSB=0.909137;RPB=0.459944;SGB=139.178;VDB=0.941499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.1:36806323 chr01:036806323 0 W/36806323-36806323 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.19237;DP=4552;DP4=2005,2504,14,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89174e-11;MQSB=0.980682;RPB=0.856654;SGB=-44.6276;VDB=0.947505;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.1:36808467 chr01:036808467 0 W/36808467-36808467 FN520-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g63500 expressed protein SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN-315.SNP.1:36808585 chr01:036808585 0 W/36808585-36808585 FN-315 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g63500 expressed protein SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-258.SNP.1:36810742 chr01:036810742 0 W/36810742-36810742 FN-258 Single Base Substitution G-C INTERGENIC HOMO SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1295-S.SNP.1:36817312 chr01:036817312 0 W/36817312-36817312 FN1295-S Single Base Substitution A-C INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1295-S.SNP.1:36817313 chr01:036817313 0 W/36817313-36817313 FN1295-S Single Base Substitution T-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-408.SNP.1:36824979 chr01:036824979 0 W/36824979-36824979 FN-408 Single Base Substitution A-T INTRON HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN-306.SNP.1:36838973 chr01:036838973 0 W/36838973-36838973 FN-306 Single Base Substitution G-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2564-S.SNP.1:36839076 chr01:036839076 0 W/36839076-36839076 FN2564-S SNP C -> T AC=1;AN=198;BQB=0.893181;DP=3216;DP4=1618,1369,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000310945;MQB=0.000399124;MQSB=0.0963542;RPB=0.854154;SGB=18.5788;VDB=0.00864413;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.1:36846060 chr01:036846060 0 W/36846060-36846060 FN910-S Single Base Substitution G-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3858-S.SNP.1:36848216 chr01:036848216 0 W/36848216-36848216 FN3858-S SNP T -> C AC=2;AN=158;BQB=0.993788;DP=2899;DP4=1382,1234,11,26;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0.064505;MQB=0.63434;MQSB=0;RPB=0.962427;SGB=-50.5122;VDB=0.384581;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E775|1202|LOC_Os01g63550|protein_coding|CODING|LOC_Os01g63550.1|3|1) FN879-S.SNP.1:36849360 chr01:036849360 0 W/36849360-36849360 FN879-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g63550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3341-S.SNP.1:36852978 chr01:036852978 0 W/36852978-36852978 FN3341-S SNP C -> T AC=1;AN=184;BQB=0.99249;DP=3115;DP4=1513,1506,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.223435;MQB=0.642971;MQSB=0;RPB=0.119085;SGB=48.7425;VDB=0.473679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.1:36853262 chr01:036853262 0 W/36853262-36853262 FN2315 SNP G -> T AC=1;AN=192;BQB=0.616761;DP=4899;DP4=2803,1700,20,9;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0557257;MQB=0.359279;MQSB=9.17832e-25;RPB=0.996388;SGB=26.127;VDB=0.3237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.1:36853369 chr01:036853369 0 W/36853369-36853369 FN1258-S Single Base Substitution A-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2206-S.SNP.1:36860591 chr01:036860591 0 W/36860591-36860591 FN2206-S SNP C -> T AC=2;AN=190;BQB=0.240926;DP=5341;DP4=2629,2326,15,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.97908e-17;MQSB=0.0617988;RPB=0.782177;SGB=-45.2469;VDB=0.8628;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.1:36861452 chr01:036861452 0 W/36861452-36861452 FN1563-S Single Base Substitution C-T INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN-160.SNP.1:36862097 chr01:036862097 0 W/36862097-36862097 FN-160 Single Base Substitution A-T INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1548-S.SNP.1:36864959 chr01:036864959 0 W/36864959-36864959 FN1548-S SNP C -> A AC=1;AN=188;BQB=0.983937;DP=2831;DP4=1571,1202,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.15524e-07;MQSB=0.830948;RPB=0.944785;SGB=46.6141;VDB=0.976878;EFF=INTRON(MODIFIER||||497|LOC_Os01g63580|protein_coding|CODING|LOC_Os01g63580.1|1|1) FN4021-S.SNP.1:36872201 chr01:036872201 0 W/36872201-36872201 FN4021-S SNP C -> T AC=2;AN=168;BQB=0.862813;DP=2342;DP4=1032,1195,10,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.26859e-10;MQSB=0.995297;RPB=0.504272;SGB=100.912;VDB=0.208601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.1:36872498 chr01:036872498 0 W/36872498-36872498 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.89887;DP=1885;DP4=731,1091,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000161649;MQSB=0.947278;RPB=0.996635;SGB=26.3271;VDB=0.846879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.1:36876593 chr01:036876593 0 W/36876593-36876593 FN1302-S Single Base Substitution C-A INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1302-S.SNP.1:36876594 chr01:036876594 0 W/36876594-36876594 FN1302-S Single Base Substitution G-A INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2578-S.SNP.1:36877289 chr01:036877289 0 W/36877289-36877289 FN2578-S SNP A -> T AC=1;AN=188;BQB=0.976996;DP=3960;DP4=1956,1740,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000252525;MQB=0.000169486;MQSB=0.798508;RPB=0.902284;SGB=22.1736;VDB=0.5193;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.1:36877353 chr01:036877353 0 W/36877353-36877353 FN4106-S SNP A -> G AC=1;AN=182;BQB=0.999383;DP=3579;DP4=1540,1966,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.000838223;MQB=2.75179e-07;MQSB=0.0334468;RPB=0.321703;SGB=62.1548;VDB=0.176417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.1:36895447 chr01:036895447 0 W/36895447-36895447 FN1037-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1037-S.SNP.1:36895520 chr01:036895520 0 W/36895520-36895520 FN1037-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g63620 expressed protein SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2116-S.SNP.1:36897792 chr01:036897792 0 W/36897792-36897792 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.0678292;DP=3444;DP4=1028,2359,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86591e-07;MQSB=0.78023;RPB=0.190409;SGB=-87.7854;VDB=0.309312;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.1:36906753 chr01:036906753 0 W/36906753-36906753 FN1151-S Single Base Substitution G-A INTRON HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2692-S.SNP.1:36906781 chr01:036906781 0 W/36906781-36906781 FN2692-S SNP C -> T AC=1;AN=200;BQB=0.990707;DP=4041;DP4=1682,1946,5,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00445434;MQB=0.00247343;MQSB=0.00871276;RPB=0.993872;SGB=36.6644;VDB=0.0126333;EFF=INTRON(MODIFIER||||462|LOC_Os01g63630|protein_coding|CODING|LOC_Os01g63630.1|4|1) FN1573-S.SNP.1:36908262 chr01:036908262 0 W/36908262-36908262 FN1573-S Single Base Substitution G-A INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN-283.SNP.1:36910778 chr01:036910778 0 W/36910778-36910778 FN-283 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g63640 retrotransposon protein, putative, unclassified, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1085-S.SNP.1:36910778 chr01:036910778 0 W/36910778-36910778 FN1085-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g63640 retrotransposon protein, putative, unclassified, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN451-S.SNP.1:36910778 chr01:036910778 0 W/36910778-36910778 FN451-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g63640 retrotransposon protein, putative, unclassified, expressed SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN_N1-116-1.SNP.1:36910778 chr01:036910778 0 W/36910778-36910778 FN_N1-116-1 Single Base Substitution C-T Homo LOC_Os01g63640 retrotransposon protein, putative, unclassified, expressed SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN3457-S.SNP.1:36911020 chr01:036911020 0 W/36911020-36911020 FN3457-S SNP A -> G AC=1;AN=184;BQB=0.864264;DP=3867;DP4=1857,1836,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0307732;MQB=0.0329039;MQSB=1.41755e-12;RPB=0.258584;SGB=6.80232;VDB=0.792053;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N207D|827|LOC_Os01g63640|protein_coding|CODING|LOC_Os01g63640.1|1|1) FN1357-S.SNP.1:36912986 chr01:036912986 0 W/36912986-36912986 FN1357-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g63640 retrotransposon protein, putative, unclassified, expressed SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN-290.SNP.1:36926814 chr01:036926814 0 W/36926814-36926814 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN-234.SNP.1:36930410 chr01:036930410 0 W/36930410-36930410 FN-234 Single Base Substitution G-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN863-S.SNP.1:36930650 chr01:036930650 0 W/36930650-36930650 FN863-S Single Base Substitution C-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3879-S.SNP.1:36934100 chr01:036934100 0 W/36934100-36934100 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.91495;DP=2284;DP4=1045,1140,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.50964e-08;MQSB=0.775446;RPB=0.906322;SGB=47.0672;VDB=0.0455448;EFF=INTRON(MODIFIER||||61|LOC_Os01g63670|protein_coding|CODING|LOC_Os01g63670.1|1|1) FN1483-S.SNP.1:36953560 chr01:036953560 0 W/36953560-36953560 FN1483-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g63710 CDC6 - Putative DNA replication initiation protein, expressed SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2498.SNP.1:36967912 chr01:036967912 0 W/36967912-36967912 FN2498 SNP T -> G AC=1;AN=200;BQB=0.964602;DP=4455;DP4=1953,2055,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000224467;MQB=5.80502e-10;MQSB=0.629072;RPB=0.981592;SGB=32.0901;VDB=0.740294;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.1:36968918 chr01:036968918 0 W/36968918-36968918 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.652325;DP=3124;DP4=1538,1453,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.93236e-09;MQSB=0.89448;RPB=0.774028;SGB=3.4556;VDB=0.957408;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.1:36978490 chr01:036978490 0 W/36978490-36978490 FN2213-S SNP C -> T AC=1;AN=190;BQB=0.732658;DP=4724;DP4=2199,2195,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00105843;MQB=6.66939e-10;MQSB=0.987547;RPB=0.518649;SGB=10.3266;VDB=0.857806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A407T|904|LOC_Os01g63740|protein_coding|CODING|LOC_Os01g63740.1|3|1) FN918-S.SNP.1:36987994 chr01:036987994 0 W/36987994-36987994 FN918-S Single Base Substitution G-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2581-S.SNP.1:36994761 chr01:036994761 0 W/36994761-36994761 FN2581-S SNP C -> A AC=1;AN=198;BQB=0.666906;DP=4477;DP4=2156,2140,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000190469;MQSB=0.968945;RPB=0.726056;SGB=25.7687;VDB=0.10712;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.1:36998435 chr01:036998435 0 W/36998435-36998435 FN721-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN337-S.SNP.1:37002457 chr01:037002457 0 W/37002457-37002457 FN337-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN1384-S.SNP.1:37005819 chr01:037005819 0 W/37005819-37005819 FN1384-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN953-S.SNP.1:37014910 chr01:037014910 0 W/37014910-37014910 FN953-S Single Base Substitution C-T INTERGENIC HOMO SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3378-S.SNP.1:37017537 chr01:037017537 0 W/37017537-37017537 FN3378-S SNP C -> A AC=1;AN=184;BQB=0.80826;DP=3307;DP4=1526,1679,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.28188e-12;MQSB=0.492079;RPB=0.564137;SGB=98.4821;VDB=0.303942;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R126|158|LOC_Os01g63800|protein_coding|CODING|LOC_Os01g63800.1|1|1) FN942-S.SNP.1:37019426 chr01:037019426 0 W/37019426-37019426 FN942-S Single Base Substitution A-T INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN3396-S.SNP.1:37019436 chr01:037019436 0 W/37019436-37019436 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.951546;DP=2192;DP4=1149,990,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.48698e-07;MQSB=0.994525;RPB=0.93952;SGB=39.699;VDB=0.910125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.1:37032141 chr01:037032141 0 W/37032141-37032141 FN1702-S SNP G -> A AC=2;AN=188;BQB=0.282816;DP=3018;DP4=2254,713,23,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.93114e-13;MQSB=0.894049;RPB=0.615774;SGB=-7.93693;VDB=0.713515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.1:37045416 chr01:037045416 0 W/37045416-37045416 FN2612-S SNP G -> T AC=1;AN=198;BQB=0.441253;DP=3900;DP4=1977,1722,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.33058e-10;MQSB=0.981619;RPB=0.238692;SGB=79.6954;VDB=0.00870862;EFF=INTRON(MODIFIER||||457|LOC_Os01g63854|protein_coding|CODING|LOC_Os01g63854.1|2|1) FN868-S.SNP.1:37046323 chr01:037046323 0 W/37046323-37046323 FN868-S Single Base Substitution G-T INTRON HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2637-S.SNP.1:37046767 chr01:037046767 0 W/37046767-37046767 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.781445;DP=4883;DP4=2146,2477,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204792;MQB=1.68751e-10;MQSB=0.979678;RPB=0.947864;SGB=-11.8999;VDB=0.959273;EFF=INTRON(MODIFIER||||457|LOC_Os01g63854|protein_coding|CODING|LOC_Os01g63854.1|2|1) FN-289.SNP.1:37053060 chr01:037053060 0 W/37053060-37053060 FN-289 Single Base Substitution G-T INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN-289.SNP.1:37053063 chr01:037053063 0 W/37053063-37053063 FN-289 Single Base Substitution G-A INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN-289.SNP.1:37053064 chr01:037053064 0 W/37053064-37053064 FN-289 Single Base Substitution G-A INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN2083-S.SNP.1:37059067 chr01:037059067 0 W/37059067-37059067 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.999812;DP=3365;DP4=1464,1849,12,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.63128e-16;MQSB=0.999346;RPB=0.979353;SGB=-8.91027;VDB=0.0182328;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.1:37059883 chr01:037059883 0 W/37059883-37059883 FN4109-S SNP C -> T AC=2;AN=182;BQB=0.847135;DP=3192;DP4=1746,1324,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.70857e-09;MQSB=0.996452;RPB=0.439474;SGB=102.753;VDB=0.426881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:37061561 chr01:037061561 0 W/37061561-37061561 FN2754-S SNP T -> A AC=1;AN=200;BQB=0.893441;DP=4986;DP4=2517,2236,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06452e-09;MQSB=0.998026;RPB=0.82814;SGB=47.4799;VDB=0.988242;EFF=INTRON(MODIFIER||||434|LOC_Os01g63870|protein_coding|CODING|LOC_Os01g63870.1|2|1) FN3667-S.SNP.1:37062040 chr01:037062040 0 W/37062040-37062040 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.975131;DP=2743;DP4=1375,1292,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.37178e-08;MQSB=0.994337;RPB=0.584646;SGB=32.5467;VDB=0.778166;EFF=INTRON(MODIFIER||||434|LOC_Os01g63870|protein_coding|CODING|LOC_Os01g63870.1|4|1) FN3676-S.SNP.1:37062784 chr01:037062784 0 W/37062784-37062784 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.999134;DP=2718;DP4=1131,1486,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.96839e-08;MQSB=0.755095;RPB=0.349308;SGB=58.2031;VDB=0.790183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N237D|434|LOC_Os01g63870|protein_coding|CODING|LOC_Os01g63870.1|6|1) FN2326.SNP.1:37065676 chr01:037065676 0 W/37065676-37065676 FN2326 SNP T -> A AC=1;AN=192;BQB=0.644236;DP=4777;DP4=2822,1653,15,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209336;MQB=1.84499e-11;MQSB=0.660649;RPB=0.0942932;SGB=64.7304;VDB=0.0156023;EFF=UTR_3_PRIME(MODIFIER||242||547|LOC_Os01g63880|protein_coding|CODING|LOC_Os01g63880.1|4|1) FN2146-S.SNP.1:37074571 chr01:037074571 0 W/37074571-37074571 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.00861152;DP=4067;DP4=1827,2209,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000180874;MQSB=1;RPB=0.657406;SGB=-36.659;VDB=0.256372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.1:37076906 chr01:037076906 0 W/37076906-37076906 FN1472-S Single Base Substitution T-A INTRON Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1320-S.SNP.1:37080190 chr01:037080190 0 W/37080190-37080190 FN1320-S Single Base Substitution G-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1320-S.SNP.1:37080191 chr01:037080191 0 W/37080191-37080191 FN1320-S Single Base Substitution G-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3678-S.SNP.1:37082122 chr01:037082122 0 W/37082122-37082122 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.743392;DP=3029;DP4=1530,1409,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18194e-06;MQSB=0.905856;RPB=0.975516;SGB=25.439;VDB=0.812497;EFF=INTRON(MODIFIER||||1088|LOC_Os01g63910|protein_coding|CODING|LOC_Os01g63910.1|9|1),INTRON(MODIFIER||||1085|LOC_Os01g63910|protein_coding|CODING|LOC_Os01g63910.2|9|1) FN2206-S.SNP.1:37094859 chr01:037094859 0 W/37094859-37094859 FN2206-S SNP G -> A AC=1;AN=190;BQB=0.829896;DP=4071;DP4=2009,1674,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.39447e-06;MQSB=0.760661;RPB=0.76575;SGB=62.7569;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.1:37099260 chr01:037099260 0 W/37099260-37099260 FN4096-S SNP A -> G AC=1;AN=182;BQB=0.909494;DP=3152;DP4=1538,1440,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.20524e-07;MQSB=0.77804;RPB=0.999752;SGB=15.6115;VDB=0.593729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.1:37102784 chr01:037102784 0 W/37102784-37102784 FN1371-S Single Base Substitution G-A INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3515-S.SNP.1:37103415 chr01:037103415 0 W/37103415-37103415 FN3515-S SNP G -> A AC=1;AN=188;BQB=0.998558;DP=2614;DP4=1273,1276,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44273e-05;MQSB=0.990383;RPB=0.877581;SGB=18.2682;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.1:37110353 chr01:037110353 0 W/37110353-37110353 FN1540-S Single Base Substitution A-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2535-S.SNP.1:37112877 chr01:037112877 0 W/37112877-37112877 FN2535-S SNP A -> G AC=2;AN=198;BQB=0.902436;DP=4235;DP4=2302,1720,28,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.86365e-27;MQSB=0.543748;RPB=0.37827;SGB=214.973;VDB=0.213574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.1:37117047 chr01:037117047 0 W/37117047-37117047 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.863196;DP=3277;DP4=1708,1466,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28073e-12;MQSB=0.998832;RPB=0.936474;SGB=60.4004;VDB=0.777048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.1:37122457 chr01:037122457 0 W/37122457-37122457 FN3538-S SNP G -> T AC=1;AN=188;BQB=0.940639;DP=3027;DP4=1745,1176,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.2046e-06;MQSB=0.477071;RPB=0.92766;SGB=35.3493;VDB=0.136639;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.1:37123152 chr01:037123152 0 W/37123152-37123152 FN3631-S SNP C -> T AC=1;AN=190;BQB=0.770132;DP=2265;DP4=1563,573,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.12487e-09;MQSB=0.126955;RPB=0.55153;SGB=62.7569;VDB=0.586962;EFF=UTR_5_PRIME(MODIFIER||3||403|LOC_Os01g63950|protein_coding|CODING|LOC_Os01g63950.1|1|1) FN553-S.SNP.1:37128334 chr01:037128334 0 W/37128334-37128334 FN553-S Single Base Substitution C-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2221-S.SNP.1:37139510 chr01:037139510 0 W/37139510-37139510 FN2221-S SNP C -> A AC=1;AN=190;BQB=0.745484;DP=4827;DP4=2234,2328,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.64995e-15;MQSB=0.756617;RPB=0.532038;SGB=89.4087;VDB=0.509809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.1:37140262 chr01:037140262 0 W/37140262-37140262 FN2333 SNP G -> A AC=1;AN=192;BQB=0.0474867;DP=5270;DP4=2761,2158,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.42283e-12;MQSB=0.492826;RPB=0.805168;SGB=41.7357;VDB=0.728358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.1:37141112 chr01:037141112 0 W/37141112-37141112 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.99846;DP=5203;DP4=2267,2622,8,8;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.188929;MQB=0.114058;MQSB=6.79202e-27;RPB=0.321493;SGB=68.0801;VDB=0.64485;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.1:37155972 chr01:037155972 0 W/37155972-37155972 FN980-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g63990 hydrolase, alpha/beta fold family protein, putative, expressed SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3513-S.SNP.1:37157604 chr01:037157604 0 W/37157604-37157604 FN3513-S SNP C -> T AC=1;AN=188;BQB=0.982574;DP=2828;DP4=1401,1328,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86056e-05;MQSB=0.997194;RPB=0.288524;SGB=30.8063;VDB=0.794842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.1:37162012 chr01:037162012 0 W/37162012-37162012 FN2349 SNP T -> C AC=1;AN=192;BQB=0.659129;DP=4695;DP4=2034,2326,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.39533e-13;MQSB=0.350964;RPB=0.823513;SGB=46.8644;VDB=0.439396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.1:37162716 chr01:037162716 0 W/37162716-37162716 FN2474 SNP G -> A AC=2;AN=200;BQB=0.895518;DP=3375;DP4=1979,1143,24,5;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.99124e-17;MQSB=0.84396;RPB=0.786585;SGB=60.747;VDB=0.458968;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.1:37165402 chr01:037165402 0 W/37165402-37165402 FN3565-S SNP C -> T AC=1;AN=188;BQB=0.925157;DP=3706;DP4=1724,1891,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.40098e-15;MQSB=0.861435;RPB=0.999954;SGB=74.9605;VDB=0.882013;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN-107 Single Base Substitution A-G INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-374.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN-374 Single Base Substitution A-G INTERGENIC HOMO SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1293-S.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN1293-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN3056-S.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN3056-S SNP A -> G AC=1;AN=184;BQB=0.850604;DP=3105;DP4=1468,1528,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.14611e-09;MQSB=0.817301;RPB=0.950163;SGB=75.8731;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN3451-S SNP A -> G AC=2;AN=184;BQB=0.784726;DP=2928;DP4=1335,1486,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.56049e-13;MQSB=0.996669;RPB=0.895891;SGB=116.569;VDB=0.889466;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN421-S Single Base Substitution A-G INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN4253-S.SNP.1:37173534 chr01:037173534 0 W/37173534-37173534 FN4253-S SNP A -> G AC=1;AN=170;BQB=0.901592;DP=2350;DP4=983,1293,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31011e-05;MQSB=0.948394;RPB=0.704552;SGB=38.987;VDB=0.90065;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.1:37177736 chr01:037177736 0 W/37177736-37177736 FN4190-S SNP C -> A AC=1;AN=170;BQB=0.445006;DP=2434;DP4=1263,1085,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.4316e-06;MQSB=0.992435;RPB=0.942591;SGB=12.556;VDB=0.907553;EFF=INTRON(MODIFIER||||259|LOC_Os01g64010|protein_coding|CODING|LOC_Os01g64010.1|1|1),INTRON(MODIFIER||||259|LOC_Os01g64010|protein_coding|CODING|LOC_Os01g64010.2|1|1) FN2661-S.SNP.1:37183017 chr01:037183017 0 W/37183017-37183017 FN2661-S SNP G -> T AC=2;AN=200;BQB=0.681759;DP=5013;DP4=2412,2279,27,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.19741e-21;MQSB=0.983193;RPB=0.823149;SGB=192.42;VDB=0.790211;EFF=INTRON(MODIFIER||||539|LOC_Os01g64020|protein_coding|CODING|LOC_Os01g64020.1|11|1),INTRON(MODIFIER||||259|LOC_Os01g64010|protein_coding|CODING|LOC_Os01g64010.1|4|1) FN1330-S.SNP.1:37183701 chr01:037183701 0 W/37183701-37183701 FN1330-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2587-S.SNP.1:37188750 chr01:037188750 0 W/37188750-37188750 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.999958;DP=4232;DP4=1894,2067,9,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000236295;MQB=1.31359e-15;MQSB=0.998271;RPB=0.46737;SGB=-73.8745;VDB=0.798337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.1:37197165 chr01:037197165 0 W/37197165-37197165 FN-346 Single Base Substitution T-C INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN4271-S.SNP.1:37215083 chr01:037215083 0 W/37215083-37215083 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.970778;DP=2629;DP4=1314,1246,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00494485;MQB=0.0423006;MQSB=0.61554;RPB=0.914095;SGB=21.1076;VDB=0.7357;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q534*|1795|LOC_Os01g64070|protein_coding|CODING|LOC_Os01g64070.1|2|1);LOF=(LOC_Os01g64070|LOC_Os01g64070|1|1.00);NMD=(LOC_Os01g64070|LOC_Os01g64070|1|1.00) FN3471-S.SNP.1:37216141 chr01:037216141 0 W/37216141-37216141 FN3471-S SNP G -> A AC=1;AN=184;BQB=0.996135;DP=4882;DP4=2343,2437,15,14;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.163662;MQB=0.510814;MQSB=0.00497638;RPB=0.144841;SGB=125.613;VDB=0.346933;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D328|1795|LOC_Os01g64070|protein_coding|CODING|LOC_Os01g64070.1|1|1) FN3763-S.SNP.1:37216821 chr01:037216821 0 W/37216821-37216821 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.975135;DP=3378;DP4=1612,1644,18,16;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.115749;MQB=0.387183;MQSB=0.463869;RPB=0.909069;SGB=72.1834;VDB=0.378953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E102K|1795|LOC_Os01g64070|protein_coding|CODING|LOC_Os01g64070.1|1|1) FN516-S.SNP.1:37220271 chr01:037220271 0 W/37220271-37220271 FN516-S Single Base Substitution G-T INTERGENIC HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN1351-S.SNP.1:37220728 chr01:037220728 0 W/37220728-37220728 FN1351-S Single Base Substitution C-T INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1220-S.SNP.1:37227176 chr01:037227176 0 W/37227176-37227176 FN1220-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g64080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN2215-S.SNP.1:37228810 chr01:037228810 0 W/37228810-37228810 FN2215-S SNP G -> A AC=1;AN=190;BQB=0.581665;DP=4737;DP4=2316,2087,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000211104;MQB=2.63345e-15;MQSB=0.940856;RPB=0.898357;SGB=30.527;VDB=0.955115;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q67*|1627|LOC_Os01g64080|protein_coding|CODING|LOC_Os01g64080.1|1|1);LOF=(LOC_Os01g64080|LOC_Os01g64080|1|1.00);NMD=(LOC_Os01g64080|LOC_Os01g64080|1|1.00) FN956-S.SNP.1:37231163 chr01:037231163 0 W/37231163-37231163 FN956-S Single Base Substitution A-G INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1030-S.SNP.1:37235869 chr01:037235869 0 W/37235869-37235869 FN1030-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN1030-S.SNP.1:37243617 chr01:037243617 0 W/37243617-37243617 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN_949-1.SNP.1:37244512 chr01:037244512 0 W/37244512-37244512 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. W463-2-1.SNP.1:37251009 chr01:037251009 0 W/37251009-37251009 W463-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3474-S.SNP.1:37255132 chr01:037255132 0 W/37255132-37255132 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.996979;DP=3358;DP4=1329,1911,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.254616;MQB=0.591228;MQSB=0;RPB=0.505537;SGB=62.3078;VDB=0.278414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.1:37277698 chr01:037277698 0 W/37277698-37277698 FN2213-S SNP A -> C AC=2;AN=190;BQB=0.814961;DP=4770;DP4=2221,2260,19,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.34247e-24;MQSB=0.896531;RPB=0.829897;SGB=146.271;VDB=0.163498;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.1:37282772 chr01:037282772 0 W/37282772-37282772 FN548-S Single Base Substitution A-G INTRON HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN1009-S.SNP.1:37295042 chr01:037295042 0 W/37295042-37295042 FN1009-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g64220 expressed protein SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2572-S.SNP.1:37303883 chr01:037303883 0 W/37303883-37303883 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.946446;DP=3899;DP4=1931,1672,22,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.8253e-23;MQSB=0.97274;RPB=0.764712;SGB=182.807;VDB=0.410172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A87V|406|LOC_Os01g64250|protein_coding|CODING|LOC_Os01g64250.1|1|1) FN1658-S.SNP.1:37304413 chr01:037304413 0 W/37304413-37304413 FN1658-S SNP G -> C AC=2;AN=188;BQB=0.00239512;DP=3246;DP4=2186,1003,27,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.02073e-11;MQSB=0.828283;RPB=0.994514;SGB=-436.629;VDB=0.698162;EFF=INTRON(MODIFIER||||406|LOC_Os01g64250|protein_coding|CODING|LOC_Os01g64250.1|1|1) FN732-S.SNP.1:37308160 chr01:037308160 0 W/37308160-37308160 FN732-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2177-S.SNP.1:37312258 chr01:037312258 0 W/37312258-37312258 FN2177-S SNP C -> A AC=1;AN=168;BQB=0.520184;DP=4150;DP4=1892,2219,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.95475e-07;MQSB=0.977372;RPB=0.751408;SGB=-15.8033;VDB=0.362378;EFF=INTRON(MODIFIER||||186|LOC_Os01g64262|protein_coding|CODING|LOC_Os01g64262.1|3|1) FN3912-S.SNP.1:37316403 chr01:037316403 0 W/37316403-37316403 FN3912-S SNP G -> T AC=1;AN=158;BQB=0.997169;DP=2311;DP4=1088,1123,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.43028e-05;MQSB=0.971871;RPB=0.983507;SGB=20.5959;VDB=0.136639;EFF=UTR_3_PRIME(MODIFIER||75||399|LOC_Os01g64280|protein_coding|CODING|LOC_Os01g64280.1|11|1),UTR_3_PRIME(MODIFIER||273||186|LOC_Os01g64270|protein_coding|CODING|LOC_Os01g64270.1|3|1) FN2649-S.SNP.1:37317060 chr01:037317060 0 W/37317060-37317060 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.928894;DP=4780;DP4=2266,2289,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.94957e-07;MQSB=0.992695;RPB=0.200448;SGB=40.4492;VDB=0.157695;EFF=INTRON(MODIFIER||||399|LOC_Os01g64280|protein_coding|CODING|LOC_Os01g64280.1|9|1) FN765-S.SNP.1:37317282 chr01:037317282 0 W/37317282-37317282 FN765-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN2477.SNP.1:37326908 chr01:037326908 0 W/37326908-37326908 FN2477 SNP T -> C AC=1;AN=200;BQB=0.360435;DP=4920;DP4=2338,2318,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62033e-17;MQSB=0.999673;RPB=0.769928;SGB=123.342;VDB=0.109021;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.1:37327624 chr01:037327624 0 W/37327624-37327624 FN4114-S SNP A -> G AC=1;AN=182;BQB=0.964567;DP=2932;DP4=1302,1556,1,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.01977e-06;MQSB=0.998313;RPB=0.120127;SGB=21.5845;VDB=0.146504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.1:37328202 chr01:037328202 0 W/37328202-37328202 FN3920-S SNP A -> G AC=1;AN=158;BQB=0.547654;DP=2354;DP4=1123,1171,4,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.02049e-08;MQSB=0.933053;RPB=0.603786;SGB=68.9144;VDB=0.278653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.1:37328472 chr01:037328472 0 W/37328472-37328472 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.221267;DP=3948;DP4=1825,1875,4,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000614498;MQSB=0.280599;RPB=0.999234;SGB=21.981;VDB=0.688859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.1:37332374 chr01:037332374 0 W/37332374-37332374 FN2338 SNP G -> C AC=1;AN=192;BQB=0.936929;DP=4770;DP4=2446,2052,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.25068e-12;MQSB=0.841222;RPB=0.91811;SGB=41.7357;VDB=0.272946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.1:37336980 chr01:037336980 0 W/37336980-37336980 FN2680-S SNP T -> C AC=1;AN=200;BQB=0.856722;DP=5125;DP4=2705,2254,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.38433e-16;MQSB=0.980337;RPB=0.998614;SGB=83.5316;VDB=0.50024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.1:37345729 chr01:037345729 0 W/37345729-37345729 FN1288-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN-141.SNP.1:37355153 chr01:037355153 0 W/37355153-37355153 FN-141 Single Base Substitution A-T INTRON HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN2494.SNP.1:37357775 chr01:037357775 0 W/37357775-37357775 FN2494 SNP T -> A AC=1;AN=200;BQB=0.450987;DP=4082;DP4=1689,1967,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08868e-08;MQSB=0.999895;RPB=0.635689;SGB=-36.1052;VDB=0.63417;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.1:37359889 chr01:037359889 0 W/37359889-37359889 FN3967-S SNP G -> A AC=1;AN=182;BQB=0.844794;DP=3340;DP4=1448,1758,9,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.31848e-15;MQSB=0.971485;RPB=0.996136;SGB=98.2417;VDB=0.515943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.1:37363416 chr01:037363416 0 W/37363416-37363416 FN3911-S SNP C -> G AC=1;AN=158;BQB=0.97602;DP=2507;DP4=1129,1279,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.00574e-05;MQSB=0.145646;RPB=0.962041;SGB=17.2267;VDB=0.538025;EFF=UTR_5_PRIME(MODIFIER||56||298|LOC_Os01g64370|protein_coding|CODING|LOC_Os01g64370.1|1|1) FN3782-S.SNP.1:37365081 chr01:037365081 0 W/37365081-37365081 FN3782-S SNP T -> A AC=1;AN=190;BQB=0.758484;DP=2396;DP4=1194,1115,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000417362;MQB=9.30829e-06;MQSB=0.998457;RPB=0.964509;SGB=10.8904;VDB=0.431287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.1:37365082 chr01:037365082 0 W/37365082-37365082 FN3782-S SNP G -> A AC=1;AN=190;BQB=0.969318;DP=2386;DP4=1185,1104,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.79373e-06;MQSB=0.999583;RPB=0.850291;SGB=30.8803;VDB=0.226103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.1:37371868 chr01:037371868 0 W/37371868-37371868 FN3855-S SNP T -> C AC=1;AN=158;BQB=0.867487;DP=2425;DP4=1248,1037,15,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000412371;MQB=1.07522e-09;MQSB=0.995656;RPB=0.919669;SGB=86.3921;VDB=0.382233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.1:37372463 chr01:037372463 0 W/37372463-37372463 FN1661-S Single Base Substitution C-T INTERGENIC Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2668-S.SNP.1:37383500 chr01:037383500 0 W/37383500-37383500 FN2668-S SNP G -> T AC=1;AN=200;BQB=0.879102;DP=5471;DP4=2577,2559,13,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.02284e-21;MQSB=0.98102;RPB=0.286914;SGB=108.768;VDB=0.467971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.1:37390102 chr01:037390102 0 W/37390102-37390102 FN2106-S SNP A -> G AC=1;AN=168;BQB=0.149869;DP=3938;DP4=1448,2382,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0332656;MQB=3.34248e-06;MQSB=3.13505e-23;RPB=0.820498;SGB=19.9297;VDB=0.696425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.1:37393110 chr01:037393110 0 W/37393110-37393110 FN3740-S SNP A -> G AC=1;AN=190;BQB=0.85636;DP=2691;DP4=1149,1368,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.68378e-08;MQSB=0.959151;RPB=0.70688;SGB=-14.8836;VDB=0.629558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.1:37395541 chr01:037395541 0 W/37395541-37395541 FN2620-S SNP A -> T AC=1;AN=198;BQB=0.773914;DP=4027;DP4=1718,1988,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.30934e-11;MQSB=0.14892;RPB=0.839325;SGB=47.5102;VDB=0.117336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.1:37410634 chr01:037410634 0 W/37410634-37410634 FN2304 SNP A -> G AC=2;AN=192;BQB=0.997653;DP=5149;DP4=2417,2403,27,30;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.00485531;MQB=3.01207e-10;MQSB=1.01403e-08;RPB=0.806535;SGB=131.488;VDB=0.756995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.1:37435078 chr01:037435078 0 W/37435078-37435078 FN2431 SNP G -> C AC=2;AN=200;BQB=0.126168;DP=5039;DP4=2282,2430,17,26;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00555666;MQB=7.72017e-25;MQSB=0.551702;RPB=0.999999;SGB=97.2193;VDB=0.168906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.1:37435139 chr01:037435139 0 W/37435139-37435139 FN2431 SNP G -> A AC=2;AN=200;BQB=0.8905;DP=4784;DP4=2185,2303,15,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00355351;MQB=1.33899e-22;MQSB=0.317921;RPB=0.75532;SGB=126.794;VDB=0.821093;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.1:37437871 chr01:037437871 0 W/37437871-37437871 FN957-S Single Base Substitution C-T INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1216-S.SNP.1:37453487 chr01:037453487 0 W/37453487-37453487 FN1216-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN995-S.SNP.1:37457063 chr01:037457063 0 W/37457063-37457063 FN995-S Single Base Substitution C-A INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1692-S.SNP.1:37468334 chr01:037468334 0 W/37468334-37468334 FN1692-S SNP T -> C AC=1;AN=188;BQB=0.283316;DP=3277;DP4=1317,1922,13,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.88341e-12;MQSB=0.996352;RPB=0.664722;SGB=-41.9316;VDB=0.744393;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.1:37481979 chr01:037481979 0 W/37481979-37481979 FN-264 Single Base Substitution C-T INTERGENIC HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN4305-S.SNP.1:37482129 chr01:037482129 0 W/37482129-37482129 FN4305-S SNP C -> T AC=1;AN=170;BQB=0.751258;DP=2459;DP4=1390,1000,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.17417e-08;MQSB=0.982729;RPB=0.968534;SGB=47.8722;VDB=0.148495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.1:37482674 chr01:037482674 0 W/37482674-37482674 FN2163-S SNP G -> T AC=2;AN=168;BQB=0.485245;DP=1727;DP4=808,887,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.44156e-08;MQSB=0.367045;RPB=0.546504;SGB=69.8961;VDB=0.565734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.1:37492915 chr01:037492915 0 W/37492915-37492915 FN3553-S SNP C -> T AC=2;AN=188;BQB=0.834644;DP=4144;DP4=2012,2031,17,26;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00144788;MQB=6.10213e-06;MQSB=0.00736379;RPB=0.780449;SGB=94.7451;VDB=0.977595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P697S|1985|LOC_Os01g64600|protein_coding|CODING|LOC_Os01g64600.1|2|1) FN1108-S.SNP.1:37497191 chr01:037497191 0 W/37497191-37497191 FN1108-S Single Base Substitution C-T INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3524-S.SNP.1:37498066 chr01:037498066 0 W/37498066-37498066 FN3524-S SNP C -> T AC=2;AN=188;BQB=0.822953;DP=4681;DP4=2142,2414,17,18;HOB=0.0210502;ICB=0.494738;MQ=26;MQ0F=0.143559;MQB=0.478314;MQSB=0;RPB=0.734947;SGB=-4.67716;VDB=0.802725;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A814T|995|LOC_Os01g64610|protein_coding|CODING|LOC_Os01g64610.1|4|1) FN2755-S.SNP.1:37507648 chr01:037507648 0 W/37507648-37507648 FN2755-S SNP G -> C AC=1;AN=200;BQB=0.995831;DP=5150;DP4=2417,2488,24,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.35302e-23;MQSB=0.714681;RPB=0.905723;SGB=119.583;VDB=0.700968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.1:37507649 chr01:037507649 0 W/37507649-37507649 FN2755-S SNP C -> A AC=1;AN=200;BQB=0.557655;DP=5145;DP4=2459,2412,22,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.38584e-22;MQSB=0.590159;RPB=0.956295;SGB=150.973;VDB=0.66685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.1:37514821 chr01:037514821 0 W/37514821-37514821 FN1732-S SNP T -> A AC=1;AN=188;BQB=0.114847;DP=1985;DP4=852,1059,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2828e-06;MQSB=0.951903;RPB=0.538546;SGB=41.3359;VDB=0.820274;EFF=UTR_5_PRIME(MODIFIER||107||216|LOC_Os01g64650|protein_coding|CODING|LOC_Os01g64650.1|1|1),UTR_5_PRIME(MODIFIER||107||216|LOC_Os01g64650|protein_coding|CODING|LOC_Os01g64650.2|1|1) FN4129-S.SNP.1:37524972 chr01:037524972 0 W/37524972-37524972 FN4129-S SNP C -> G AC=2;AN=182;BQB=0.844624;DP=2837;DP4=1456,1149,11,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.02695e-12;MQSB=0.903192;RPB=0.428086;SGB=15.7256;VDB=0.621022;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.1:37524976 chr01:037524976 0 W/37524976-37524976 FN4129-S SNP C -> T AC=2;AN=182;BQB=0.987121;DP=2854;DP4=1453,1193,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.47545e-15;MQSB=0.823682;RPB=0.600481;SGB=70.7363;VDB=0.74899;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.1:37528988 chr01:037528988 0 W/37528988-37528988 FN728-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g64690 LSM domain containing protein, expressed SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN351-S.SNP.1:37531257 chr01:037531257 0 W/37531257-37531257 FN351-S Single Base Substitution T-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.1:37531258 chr01:037531258 0 W/37531258-37531258 FN351-S Single Base Substitution G-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2749-S.SNP.1:37539717 chr01:037539717 0 W/37539717-37539717 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.398274;DP=4903;DP4=2017,2599,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26668e-10;MQSB=0.987625;RPB=0.999947;SGB=58.2954;VDB=0.50032;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.1:37543489 chr01:037543489 0 W/37543489-37543489 FN691-S Single Base Substitution G-T INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3832-S.SNP.1:37552388 chr01:037552388 0 W/37552388-37552388 FN3832-S SNP A -> G AC=2;AN=190;BQB=0.562115;DP=3161;DP4=1279,1603,20,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.19641e-13;MQSB=0.992452;RPB=0.377394;SGB=28.9731;VDB=0.712919;EFF=INTRON(MODIFIER||||361|LOC_Os01g64720|protein_coding|CODING|LOC_Os01g64720.1|2|1),INTRON(MODIFIER||||304|LOC_Os01g64720|protein_coding|CODING|LOC_Os01g64720.2|1|1) FN2245-S.SNP.1:37563537 chr01:037563537 0 W/37563537-37563537 FN2245-S SNP C -> T AC=1;AN=190;BQB=0.423169;DP=3536;DP4=1770,1479,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000376135;MQSB=0.966241;RPB=0.650883;SGB=49.0954;VDB=0.122175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S101N|290|LOC_Os01g64740|protein_coding|CODING|LOC_Os01g64740.1|1|1) FN1484-S.SNP.1:37564965 chr01:037564965 0 W/37564965-37564965 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1251-S.SNP.1:37566180 chr01:037566180 0 W/37566180-37566180 FN1251-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN2666-S.SNP.1:37566701 chr01:037566701 0 W/37566701-37566701 FN2666-S SNP A -> G AC=1;AN=200;BQB=0.999897;DP=4591;DP4=2272,2028,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47391e-17;MQSB=0.839502;RPB=0.441893;SGB=-5.84819;VDB=0.138936;EFF=INTRON(MODIFIER||||620|LOC_Os01g64750|protein_coding|CODING|LOC_Os01g64750.1|1|1) FN3487-S.SNP.1:37573876 chr01:037573876 0 W/37573876-37573876 FN3487-S SNP T -> C AC=2;AN=184;BQB=0.922223;DP=2502;DP4=1251,1172,15,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.63783e-23;MQSB=0.995173;RPB=0.127029;SGB=161.787;VDB=0.449246;EFF=INTRON(MODIFIER||||620|LOC_Os01g64750|protein_coding|CODING|LOC_Os01g64750.1|10|1) FN3915-S.SNP.1:37580384 chr01:037580384 0 W/37580384-37580384 FN3915-S SNP T -> A AC=2;AN=158;BQB=0.840733;DP=2738;DP4=1362,1275,16,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.86803e-14;MQSB=0.308279;RPB=0.990871;SGB=15.7806;VDB=0.223787;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.1:37589662 chr01:037589662 0 W/37589662-37589662 W721-2-1 Single Base Substitution A-G UTR_3_PRIME HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN320-S.SNP.1:37589768 chr01:037589768 0 W/37589768-37589768 FN320-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3705-S.SNP.1:37591731 chr01:037591731 0 W/37591731-37591731 FN3705-S SNP A -> T AC=2;AN=190;BQB=0.995455;DP=3015;DP4=1213,1653,9,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.82173e-15;MQSB=0.9801;RPB=0.944565;SGB=121.957;VDB=0.547006;EFF=INTRON(MODIFIER||||351|LOC_Os01g64790|protein_coding|CODING|LOC_Os01g64790.1|1|1) FN4077-S.SNP.1:37594004 chr01:037594004 0 W/37594004-37594004 FN4077-S SNP C -> T AC=1;AN=182;BQB=0.980321;DP=2813;DP4=1538,1204,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.32555e-08;MQSB=0.990282;RPB=0.985827;SGB=62.1548;VDB=0.581373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.1:37598378 chr01:037598378 0 W/37598378-37598378 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.936624;DP=2819;DP4=1285,1395,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19177e-09;MQSB=0.998382;RPB=0.742414;SGB=62.7569;VDB=0.334496;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.1:37601663 chr01:037601663 0 W/37601663-37601663 FN-273 Single Base Substitution T-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN355-S.SNP.1:37601702 chr01:037601702 0 W/37601702-37601702 FN355-S Single Base Substitution C-T INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2595-S.SNP.1:37602405 chr01:037602405 0 W/37602405-37602405 FN2595-S SNP T -> A AC=2;AN=198;BQB=0.971796;DP=4368;DP4=2143,1910,22,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.46468e-18;MQSB=0.994479;RPB=0.862579;SGB=83.8419;VDB=0.53222;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.1:37603933 chr01:037603933 0 W/37603933-37603933 FN510-S Single Base Substitution G-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN585-S.SNP.1:37607436 chr01:037607436 0 W/37607436-37607436 FN585-S Single Base Substitution G-A INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN848-S.SNP.1:37613230 chr01:037613230 0 W/37613230-37613230 FN848-S Single Base Substitution C-T INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2261-S.SNP.1:37613657 chr01:037613657 0 W/37613657-37613657 FN2261-S SNP G -> T AC=1;AN=190;BQB=0.554181;DP=4069;DP4=1475,2278,19,29;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.08085e-23;MQSB=0.0194525;RPB=0.952832;SGB=-102.257;VDB=0.655619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.1:37615119 chr01:037615119 0 W/37615119-37615119 FN1427-S Single Base Substitution T-C INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1104-S.SNP.1:37625170 chr01:037625170 0 W/37625170-37625170 FN1104-S Single Base Substitution A-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2662-S.SNP.1:37653578 chr01:037653578 0 W/37653578-37653578 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.82627;DP=4790;DP4=2202,2264,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78979e-12;MQSB=0.941862;RPB=0.482601;SGB=72.7161;VDB=0.829538;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T565|760|LOC_Os01g64860|protein_coding|CODING|LOC_Os01g64860.1|1|1) FN2662-S.SNP.1:37653579 chr01:037653579 0 W/37653579-37653579 FN2662-S SNP C -> A AC=1;AN=200;BQB=0.489363;DP=4786;DP4=2262,2200,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68555e-14;MQSB=0.911893;RPB=0.673897;SGB=95.7111;VDB=0.828249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L566M|760|LOC_Os01g64860|protein_coding|CODING|LOC_Os01g64860.1|1|1) FN4082-S.SNP.1:37654579 chr01:037654579 0 W/37654579-37654579 FN4082-S SNP A -> G AC=2;AN=182;BQB=0.753314;DP=2661;DP4=1225,1352,17,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.17992e-22;MQSB=0.999995;RPB=0.206459;SGB=161.394;VDB=0.6232;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.1:37654581 chr01:037654581 0 W/37654581-37654581 FN4082-S SNP G -> T AC=2;AN=182;BQB=0.991716;DP=2659;DP4=1225,1344,18,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.63591e-25;MQSB=0.991653;RPB=0.216321;SGB=179.437;VDB=0.531802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.1:37656377 chr01:037656377 0 W/37656377-37656377 FN2231-S SNP C -> G AC=1;AN=190;BQB=0.650884;DP=5133;DP4=2276,2521,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16635e-18;MQSB=0.962761;RPB=0.827252;SGB=59.414;VDB=0.630675;EFF=INTRON(MODIFIER||||830|LOC_Os01g64870|protein_coding|CODING|LOC_Os01g64870.1|9|1) FN1070-S.SNP.1:37659530 chr01:037659530 0 W/37659530-37659530 FN1070-S Single Base Substitution G-A INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-205.SNP.1:37663756 chr01:037663756 0 W/37663756-37663756 FN-205 Single Base Substitution G-A INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3592-S.SNP.1:37664169 chr01:037664169 0 W/37664169-37664169 FN3592-S SNP G -> A AC=1;AN=188;BQB=0.917642;DP=3657;DP4=1921,1647,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12605e-07;MQSB=0.625015;RPB=0.821362;SGB=48.979;VDB=0.143863;EFF=UTR_5_PRIME(MODIFIER||97||418|LOC_Os01g64890|protein_coding|CODING|LOC_Os01g64890.1|1|1) FN3430-S.SNP.1:37667997 chr01:037667997 0 W/37667997-37667997 FN3430-S SNP G -> A AC=2;AN=184;BQB=0.0721473;DP=2601;DP4=1090,1429,12,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.04337e-11;MQSB=0.997434;RPB=0.587666;SGB=61.1019;VDB=0.606282;EFF=INTRON(MODIFIER||||1381|LOC_Os01g64900|protein_coding|CODING|LOC_Os01g64900.1|30|1) FN2386.SNP.1:37672115 chr01:037672115 0 W/37672115-37672115 FN2386 SNP C -> A AC=1;AN=192;BQB=0.653414;DP=5288;DP4=2373,2456,25,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.80575e-18;MQSB=0.991661;RPB=0.0113391;SGB=-186.332;VDB=0.533091;EFF=INTRON(MODIFIER||||1381|LOC_Os01g64900|protein_coding|CODING|LOC_Os01g64900.1|20|1) FN-112.SNP.1:37686383 chr01:037686383 0 W/37686383-37686383 FN-112 Single Base Substitution G-T INTRON HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN763-S.SNP.1:37698537 chr01:037698537 0 W/37698537-37698537 FN763-S Single Base Substitution G-A INTRON HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-94.SNP.1:37702381 chr01:037702381 0 W/37702381-37702381 FN-94 Single Base Substitution T-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1068-S.SNP.1:37707322 chr01:037707322 0 W/37707322-37707322 FN1068-S Single Base Substitution A-T INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN3921-S.SNP.1:37709819 chr01:037709819 0 W/37709819-37709819 FN3921-S SNP C -> A AC=1;AN=158;BQB=0.999993;DP=1820;DP4=633,1081,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.03011e-08;MQSB=0.0551891;RPB=0.984993;SGB=-0.652741;VDB=0.974607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.1:37717108 chr01:037717108 0 W/37717108-37717108 FN2713-S SNP T -> A AC=1;AN=200;BQB=0.987743;DP=4942;DP4=2425,2284,16,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49146e-23;MQSB=0.967742;RPB=0.88337;SGB=84.1935;VDB=0.0112698;EFF=INTRON(MODIFIER||||965|LOC_Os01g64980|protein_coding|CODING|LOC_Os01g64980.1|9|1),INTRON(MODIFIER||||943|LOC_Os01g64980|protein_coding|CODING|LOC_Os01g64980.2|9|1) FN_N1-130-1.SNP.1:37721998 chr01:037721998 0 W/37721998-37721998 FN_N1-130-1 Single Base Substitution C-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. N1-130-2.SNP.1:37721998 chr01:037721998 0 W/37721998-37721998 N1-130-2 Single Base Substitution C-T INTERGENIC Homo SNo: 1377, Mutant_ID: N1-130-2, Generation: M2, Mutations: 30, Genes: 7, Seed availability: Yes. N1-130-3.SNP.1:37721998 chr01:037721998 0 W/37721998-37721998 N1-130-3 Single Base Substitution C-T INTERGENIC Homo SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. FN543-S.SNP.1:37725889 chr01:037725889 0 W/37725889-37725889 FN543-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g64990 GPI transamidase subunit PIG-U domain containing protein, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN-137.SNP.1:37735395 chr01:037735395 0 W/37735395-37735395 FN-137 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g65000 ammonium transporter protein, putative, expressed SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3390-S.SNP.1:37737977 chr01:037737977 0 W/37737977-37737977 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.991741;DP=3447;DP4=1631,1712,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.65856e-05;MQSB=0.86924;RPB=0.323554;SGB=30.6558;VDB=0.450147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.1:37752743 chr01:037752743 0 W/37752743-37752743 FN1209-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1209-S.SNP.1:37752744 chr01:037752744 0 W/37752744-37752744 FN1209-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3413-S.SNP.1:37753699 chr01:037753699 0 W/37753699-37753699 FN3413-S SNP G -> T AC=2;AN=184;BQB=0.927627;DP=2832;DP4=1222,1481,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.19633e-21;MQSB=0.999957;RPB=0.198681;SGB=71.1891;VDB=0.191398;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.1:37765511 chr01:037765511 0 W/37765511-37765511 FN-203 Single Base Substitution T-A INTRON HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN1173-S.SNP.1:37777331 chr01:037777331 0 W/37777331-37777331 FN1173-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2582-S.SNP.1:37778209 chr01:037778209 0 W/37778209-37778209 FN2582-S SNP G -> T AC=1;AN=198;BQB=0.70735;DP=4098;DP4=2013,1892,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.8775e-07;MQSB=0.957773;RPB=0.986733;SGB=4.56404;VDB=0.41583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S514I|522|LOC_Os01g65080|protein_coding|CODING|LOC_Os01g65080.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S514I|522|LOC_Os01g65080|protein_coding|CODING|LOC_Os01g65080.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S514I|522|LOC_Os01g65080|protein_coding|CODING|LOC_Os01g65080.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S514I|522|LOC_Os01g65080|protein_coding|CODING|LOC_Os01g65080.4|3|1) FN499-S.SNP.1:37789768 chr01:037789768 0 W/37789768-37789768 FN499-S Single Base Substitution A-G INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3768-S.SNP.1:37797230 chr01:037797230 0 W/37797230-37797230 FN3768-S SNP C -> G AC=1;AN=190;BQB=0.883842;DP=2855;DP4=1376,1344,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.0842e-08;MQSB=0.979571;RPB=0.953852;SGB=53.6492;VDB=0.18952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttG|F458L|548|LOC_Os01g65110|protein_coding|CODING|LOC_Os01g65110.1|4|1) FN1661-S.SNP.1:37798476 chr01:037798476 0 W/37798476-37798476 FN1661-S Single Base Substitution A-G INTERGENIC Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2383.SNP.1:37805839 chr01:037805839 0 W/37805839-37805839 FN2383 SNP G -> C AC=2;AN=192;BQB=0.196507;DP=5198;DP4=2289,2664,14,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78987e-21;MQSB=0.912562;RPB=0.998177;SGB=177.012;VDB=0.278434;EFF=UTR_3_PRIME(MODIFIER||1334||112|LOC_Os01g65130|protein_coding|CODING|LOC_Os01g65130.1|2|1) FN1353-S.SNP.1:37805859 chr01:037805859 0 W/37805859-37805859 FN1353-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3661-S.SNP.1:37808536 chr01:037808536 0 W/37808536-37808536 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.952849;DP=2884;DP4=1320,1454,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000346741;MQB=7.08206e-05;MQSB=0.830711;RPB=0.404171;SGB=35.4339;VDB=0.147629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.1:37808537 chr01:037808537 0 W/37808537-37808537 FN3661-S SNP G -> T AC=1;AN=190;BQB=0.986179;DP=2876;DP4=1303,1482,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000347705;MQB=6.36531e-05;MQSB=0.994084;RPB=0.355731;SGB=25.439;VDB=0.108725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.1:37814295 chr01:037814295 0 W/37814295-37814295 FN2340 SNP G -> A AC=2;AN=192;BQB=0.980422;DP=5267;DP4=2200,2740,19,22;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0.0381621;MQB=0.612876;MQSB=1.44328e-06;RPB=0.865386;SGB=90.4583;VDB=0.670619;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.1:37814817 chr01:037814817 0 W/37814817-37814817 FN-307 Single Base Substitution G-A INTRON HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1117-S.SNP.1:37815529 chr01:037815529 0 W/37815529-37815529 FN1117-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g65150 proton-dependent oligopeptide transport, putative, expressed SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN967-S.SNP.1:37824879 chr01:037824879 0 W/37824879-37824879 FN967-S Single Base Substitution C-T INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN4011-S.SNP.1:37834264 chr01:037834264 0 W/37834264-37834264 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.999732;DP=2494;DP4=1415,970,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.30731e-06;MQSB=0.978215;RPB=0.64706;SGB=27.8864;VDB=0.10099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P10L|361|LOC_Os01g65200|protein_coding|CODING|LOC_Os01g65200.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P10L|320|LOC_Os01g65200|protein_coding|CODING|LOC_Os01g65200.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P10L|548|LOC_Os01g65200|protein_coding|CODING|LOC_Os01g65200.3|1|1) FN801-S.SNP.1:37856148 chr01:037856148 0 W/37856148-37856148 FN801-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g65230 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN3311-S.SNP.1:37860530 chr01:037860530 0 W/37860530-37860530 FN3311-S Single Base Substitution G-A INTRON HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3848-S.SNP.1:37868458 chr01:037868458 0 W/37868458-37868458 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.990777;DP=2666;DP4=1147,1262,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=6.53706e-06;MQSB=0.111503;RPB=0.174108;SGB=23.8187;VDB=0.620972;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.1:37869092 chr01:037869092 0 W/37869092-37869092 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN914-S.SNP.1:37869093 chr01:037869093 0 W/37869093-37869093 FN914-S Single Base Substitution A-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1423-S.SNP.1:37876072 chr01:037876072 0 W/37876072-37876072 FN1423-S Single Base Substitution G-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1423-S.SNP.1:37876075 chr01:037876075 0 W/37876075-37876075 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3897-S.SNP.1:37885638 chr01:037885638 0 W/37885638-37885638 FN3897-S SNP G -> C AC=1;AN=158;BQB=0.904733;DP=2718;DP4=1402,1195,18,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.47668e-15;MQSB=0.970557;RPB=0.887437;SGB=81.2457;VDB=0.916941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.1:37885877 chr01:037885877 0 W/37885877-37885877 FN1385-S Single Base Substitution G-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2243-S.SNP.1:37893524 chr01:037893524 0 W/37893524-37893524 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.00380073;DP=5128;DP4=2410,2366,23,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.56433e-16;MQSB=0.473264;RPB=0.26046;SGB=-120.56;VDB=0.671484;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R688*|1388|LOC_Os01g65320|protein_coding|CODING|LOC_Os01g65320.1|8|1);LOF=(LOC_Os01g65320|LOC_Os01g65320|1|1.00);NMD=(LOC_Os01g65320|LOC_Os01g65320|1|1.00) FN1570-S.SNP.1:37902187 chr01:037902187 0 W/37902187-37902187 FN1570-S Single Base Substitution A-C INTRON Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN267-S.SNP.1:37904635 chr01:037904635 0 W/37904635-37904635 FN267-S Single Base Substitution C-T INTRON HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN-235.SNP.1:37905411 chr01:037905411 0 W/37905411-37905411 FN-235 Single Base Substitution G-T INTRON HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1340-S.SNP.1:37911896 chr01:037911896 0 W/37911896-37911896 FN1340-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3439-S.SNP.1:37920336 chr01:037920336 0 W/37920336-37920336 FN3439-S SNP T -> A AC=1;AN=184;BQB=0.359105;DP=2934;DP4=1144,1281,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.454979;MQSB=0.940154;RPB=0.94212;SGB=30.6558;VDB=0.734491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.1:37923791 chr01:037923791 0 W/37923791-37923791 FN3508-S SNP C -> T AC=1;AN=188;BQB=0.981868;DP=3229;DP4=1556,1585,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0188913;MQB=0.765513;MQSB=0.523469;RPB=0.974678;SGB=57.244;VDB=0.582386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.1:37925468 chr01:037925468 0 W/37925468-37925468 FN3375-S SNP G -> T AC=1;AN=184;BQB=0.999972;DP=3220;DP4=1444,1676,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.8311e-10;MQSB=0.861359;RPB=0.935378;SGB=53.3568;VDB=0.247106;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.1:37925662 chr01:037925662 0 W/37925662-37925662 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.652992;DP=4547;DP4=1915,2359,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000219925;MQB=3.59866e-06;MQSB=0.386931;RPB=0.936837;SGB=71.8647;VDB=0.522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.1:37934638 chr01:037934638 0 W/37934638-37934638 FN1254-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3105-S.SNP.1:37934840 chr01:037934840 0 W/37934840-37934840 FN3105-S SNP A -> G AC=1;AN=184;BQB=0.98259;DP=3091;DP4=1607,1410,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.24417e-06;MQSB=0.989176;RPB=0.512623;SGB=35.1773;VDB=0.414654;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.1:37935022 chr01:037935022 0 W/37935022-37935022 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.472431;DP=2372;DP4=1177,1096,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.29717e-10;MQSB=0.900221;RPB=0.390785;SGB=41.6313;VDB=0.506732;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.1:37936105 chr01:037936105 0 W/37936105-37936105 FN4064-S SNP C -> T AC=2;AN=168;BQB=0.937225;DP=2547;DP4=1308,1111,16,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.52177e-14;MQSB=0.958386;RPB=0.989624;SGB=75.9177;VDB=0.0315408;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.1:37939818 chr01:037939818 0 W/37939818-37939818 FN850-S Single Base Substitution G-T INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN3815-S.SNP.1:37940721 chr01:037940721 0 W/37940721-37940721 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.993709;DP=2557;DP4=1200,1281,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000211007;MQSB=0.725492;RPB=0.999577;SGB=30.8803;VDB=0.913132;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.1:37940785 chr01:037940785 0 W/37940785-37940785 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3822-S.SNP.1:37947448 chr01:037947448 0 W/37947448-37947448 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.784164;DP=2888;DP4=1370,1444,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62109e-07;MQSB=0.98099;RPB=0.992408;SGB=1.00337;VDB=0.693808;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.1:37947535 chr01:037947535 0 W/37947535-37947535 FN4096-S SNP A -> G AC=1;AN=182;BQB=0.917466;DP=3377;DP4=1653,1593,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.6991e-08;MQSB=0.999377;RPB=0.955089;SGB=32.1169;VDB=0.286182;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.1:37957169 chr01:037957169 0 W/37957169-37957169 FN868-S Single Base Substitution T-C INTRON HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2347.SNP.1:37959550 chr01:037959550 0 W/37959550-37959550 FN2347 SNP T -> C AC=1;AN=192;BQB=0.804852;DP=5371;DP4=2771,2191,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.01879e-17;MQSB=0.992419;RPB=0.838274;SGB=30.82;VDB=0.0948695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.1:37972224 chr01:037972224 0 W/37972224-37972224 FN1233-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN-18.SNP.1:37972381 chr01:037972381 0 W/37972381-37972381 FN-18 Single Base Substitution A-G INTERGENIC Homo SNo: 18, Mutant_ID: FN-18, Generation: M2, Mutations: 69, Genes: 14, Seed availability: Yes. FN1084-S.SNP.1:37980085 chr01:037980085 0 W/37980085-37980085 FN1084-S Single Base Substitution G-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1026-S.SNP.1:37984040 chr01:037984040 0 W/37984040-37984040 FN1026-S Single Base Substitution G-A INTRON HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN-225.SNP.1:37992810 chr01:037992810 0 W/37992810-37992810 FN-225 Single Base Substitution T-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3628-S.SNP.1:38001320 chr01:038001320 0 W/38001320-38001320 FN3628-S SNP C -> T AC=2;AN=190;BQB=0.526025;DP=2587;DP4=1246,1224,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.57429e-14;MQSB=0.952369;RPB=0.554529;SGB=100.07;VDB=0.610675;EFF=UTR_3_PRIME(MODIFIER||702||919|LOC_Os01g65460|protein_coding|CODING|LOC_Os01g65460.2|19|1),UTR_3_PRIME(MODIFIER||702||919|LOC_Os01g65460|protein_coding|CODING|LOC_Os01g65460.1|20|1) FN1210-S.SNP.1:38023960 chr01:038023960 0 W/38023960-38023960 FN1210-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN-335.SNP.1:38041961 chr01:038041961 0 W/38041961-38041961 FN-335 Single Base Substitution C-T INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-240.SNP.1:38044697 chr01:038044697 0 W/38044697-38044697 FN-240 Single Base Substitution C-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN-193.SNP.1:38044835 chr01:038044835 0 W/38044835-38044835 FN-193 Single Base Substitution G-A INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1695-S.SNP.1:38062970 chr01:038062970 0 W/38062970-38062970 FN1695-S SNP A -> C AC=1;AN=188;BQB=0.0554436;DP=3615;DP4=1342,2245,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.62658e-10;MQSB=0.993356;RPB=0.945695;SGB=-60.4458;VDB=0.544441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.1:38067111 chr01:038067111 0 W/38067111-38067111 FN1321-S Single Base Substitution C-T INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3382-S.SNP.1:38077418 chr01:038077418 0 W/38077418-38077418 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.866118;DP=3142;DP4=1591,1463,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.65403e-10;MQSB=0.391965;RPB=0.921964;SGB=46.3132;VDB=0.844875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3801-S.SNP.1:38078893 chr01:038078893 0 W/38078893-38078893 FN3801-S SNP G -> T AC=1;AN=190;BQB=0.918641;DP=2787;DP4=1349,1334,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74426e-05;MQSB=0.704581;RPB=0.720436;SGB=30.8803;VDB=0.874002;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.1:38092381 chr01:038092381 0 W/38092381-38092381 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.00291192;DP=2997;DP4=2421,546,14,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.000333667;MQB=0.136045;MQSB=0.132537;RPB=0.425588;SGB=27.0464;VDB=0.413055;EFF=INTRON(MODIFIER||||442|LOC_Os01g65610|protein_coding|CODING|LOC_Os01g65610.1|5|1) FN1020-S.SNP.1:38092890 chr01:038092890 0 W/38092890-38092890 FN1020-S Single Base Substitution C-T INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1020-S.SNP.1:38092891 chr01:038092891 0 W/38092891-38092891 FN1020-S Single Base Substitution C-T INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. 701-1.SNP.1:38092907 chr01:038092907 0 W/38092907-38092907 701-1 Single Base Substitution C-T INTRON Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN2191-S.SNP.1:38100905 chr01:038100905 0 W/38100905-38100905 FN2191-S SNP T -> C AC=1;AN=190;BQB=0.980724;DP=4866;DP4=2068,2514,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.61161e-11;MQSB=0.977332;RPB=0.515669;SGB=76.4186;VDB=0.477166;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.1:38105498 chr01:038105498 0 W/38105498-38105498 FN804-S Single Base Substitution T-C INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN804-S.SNP.1:38105499 chr01:038105499 0 W/38105499-38105499 FN804-S Single Base Substitution G-C INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-189.SNP.1:38111373 chr01:038111373 0 W/38111373-38111373 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-189.SNP.1:38111374 chr01:038111374 0 W/38111374-38111374 FN-189 Single Base Substitution A-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN721-S.SNP.1:38113609 chr01:038113609 0 W/38113609-38113609 FN721-S Single Base Substitution T-C INTRON HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3941-S.SNP.1:38120992 chr01:038120992 0 W/38120992-38120992 FN3941-S SNP A -> G AC=1;AN=168;BQB=0.80109;DP=3194;DP4=1281,1702,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.00689e-12;MQSB=0.960349;RPB=0.110577;SGB=41.6313;VDB=0.0431296;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.1:38121088 chr01:038121088 0 W/38121088-38121088 FN1745-S SNP T -> A AC=2;AN=188;BQB=0.000229779;DP=3293;DP4=2055,1123,15,22;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.000566422;MQSB=2.42139e-05;RPB=0.998113;SGB=-460.508;VDB=0.643727;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.1:38121089 chr01:038121089 0 W/38121089-38121089 FN-144 Single Base Substitution A-T INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2602-S.SNP.1:38124447 chr01:038124447 0 W/38124447-38124447 FN2602-S SNP G -> A AC=1;AN=186;BQB=0.35936;DP=4191;DP4=1742,2146,8,20;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.99605e-14;MQSB=0.993481;RPB=0.981643;SGB=-72.4696;VDB=0.303335;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.1:38127055 chr01:038127055 0 W/38127055-38127055 FN1732-S SNP G -> T AC=1;AN=188;BQB=0.475694;DP=2656;DP4=1450,1164,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57835e-11;MQSB=0.963527;RPB=0.972735;SGB=13.2547;VDB=0.921486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.1:38127056 chr01:038127056 0 W/38127056-38127056 FN1732-S SNP A -> T AC=1;AN=188;BQB=0.455009;DP=2663;DP4=1459,1159,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.97583e-10;MQSB=0.975267;RPB=0.974948;SGB=14.798;VDB=0.805963;EFF=INTERGENIC(MODIFIER||||||||||1) FN707-S.SNP.1:38142319 chr01:038142319 0 W/38142319-38142319 FN707-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g65680 4,5-DOPA dioxygenase extradiol, putative, expressed SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN517-S.SNP.1:38147101 chr01:038147101 0 W/38147101-38147101 FN517-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN4272-S.SNP.1:38163154 chr01:038163154 0 W/38163154-38163154 FN4272-S SNP G -> A AC=2;AN=170;BQB=0.972258;DP=2477;DP4=1168,1155,22,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.7789e-17;MQSB=0.988173;RPB=0.819038;SGB=154.496;VDB=0.423004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.1:38166369 chr01:038166369 0 W/38166369-38166369 FN3411-S SNP C -> T AC=1;AN=184;BQB=0.864958;DP=2936;DP4=1348,1413,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36725e-06;MQSB=0.0714538;RPB=0.887958;SGB=13.188;VDB=0.417004;EFF=INTRON(MODIFIER||||263|LOC_Os01g65740|protein_coding|CODING|LOC_Os01g65740.1|2|1) FN2444.SNP.1:38171172 chr01:038171172 0 W/38171172-38171172 FN2444 SNP C -> T AC=1;AN=200;BQB=0.857792;DP=3823;DP4=1941,1532,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.17745e-11;MQSB=0.232796;RPB=0.649354;SGB=114.132;VDB=0.848703;EFF=INTRON(MODIFIER||||119|LOC_Os01g65750|protein_coding|CODING|LOC_Os01g65750.1|1|1) FN3416-S.SNP.1:38179318 chr01:038179318 0 W/38179318-38179318 FN3416-S SNP A -> G AC=2;AN=184;BQB=0.815243;DP=3013;DP4=1483,1406,20,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.17235e-17;MQSB=0.746837;RPB=0.523635;SGB=109.705;VDB=0.393366;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.1:38194483 chr01:038194483 0 W/38194483-38194483 FN3455-S SNP C -> A AC=1;AN=184;BQB=0.946496;DP=3237;DP4=1582,1537,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.4258e-08;MQSB=0.766189;RPB=0.825339;SGB=53.2642;VDB=0.60361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.1:38204143 chr01:038204143 0 W/38204143-38204143 FN-290 Single Base Substitution A-C INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1707-S.SNP.1:38209651 chr01:038209651 0 W/38209651-38209651 FN1707-S SNP C -> T AC=1;AN=188;BQB=0.274379;DP=1800;DP4=728,1013,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.69435e-05;MQSB=0.992685;RPB=0.736322;SGB=0.908326;VDB=0.965934;EFF=INTRON(MODIFIER||||540|LOC_Os01g65790|protein_coding|CODING|LOC_Os01g65790.1|1|1) FN4300-S.SNP.1:38217123 chr01:038217123 0 W/38217123-38217123 FN4300-S SNP A -> G AC=1;AN=170;BQB=0.90267;DP=2632;DP4=1078,1429,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.81426e-06;MQSB=0.998728;RPB=0.950562;SGB=30.1021;VDB=0.325119;EFF=UTR_5_PRIME(MODIFIER||459||426|LOC_Os01g65800|protein_coding|CODING|LOC_Os01g65800.1|1|1) FN4300-S.SNP.1:38217124 chr01:038217124 0 W/38217124-38217124 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.935845;DP=2628;DP4=1082,1483,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04493e-05;MQSB=0.996135;RPB=0.97815;SGB=30.1021;VDB=0.308129;EFF=UTR_5_PRIME(MODIFIER||460||426|LOC_Os01g65800|protein_coding|CODING|LOC_Os01g65800.1|1|1) FN3592-S.SNP.1:38219721 chr01:038219721 0 W/38219721-38219721 FN3592-S SNP C -> A AC=1;AN=188;BQB=0.435142;DP=3925;DP4=1819,1989,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.33923e-08;MQSB=0.96731;RPB=0.636951;SGB=67.8739;VDB=0.199794;EFF=INTRON(MODIFIER||||257|LOC_Os01g65810|protein_coding|CODING|LOC_Os01g65810.1|1|1) FN1572-S.SNP.1:38220280 chr01:038220280 0 W/38220280-38220280 FN1572-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g65810 expressed protein SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN-370.SNP.1:38220735 chr01:038220735 0 W/38220735-38220735 FN-370 Single Base Substitution A-T INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1430-S.SNP.1:38233378 chr01:038233378 0 W/38233378-38233378 FN1430-S Single Base Substitution A-G INTRON HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-42.SNP.1:38236873 chr01:038236873 0 W/38236873-38236873 FN-42 Single Base Substitution C-T INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-42.SNP.1:38236874 chr01:038236874 0 W/38236874-38236874 FN-42 Single Base Substitution C-T INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1302-S.SNP.1:38245212 chr01:038245212 0 W/38245212-38245212 FN1302-S Single Base Substitution C-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1301-S.SNP.1:38253639 chr01:038253639 0 W/38253639-38253639 FN1301-S Single Base Substitution C-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1093-S.SNP.1:38254672 chr01:038254672 0 W/38254672-38254672 FN1093-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2291.SNP.1:38259977 chr01:038259977 0 W/38259977-38259977 FN2291 SNP C -> T AC=2;AN=192;BQB=0.375488;DP=5442;DP4=2530,2540,43,46;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=0;MQSB=0.969069;RPB=0.999233;SGB=198.893;VDB=0.472908;EFF=INTRON(MODIFIER||||698|LOC_Os01g65890|protein_coding|CODING|LOC_Os01g65890.1|4|1) FN2485.SNP.1:38274510 chr01:038274510 0 W/38274510-38274510 FN2485 SNP G -> A AC=1;AN=200;BQB=0.848906;DP=4198;DP4=1961,2003,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000238209;MQB=2.56804e-11;MQSB=0.779758;RPB=0.863395;SGB=15.9106;VDB=0.29287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V210M|289|LOC_Os01g65904|protein_coding|CODING|LOC_Os01g65904.1|1|1) FN2639-S.SNP.1:38279569 chr01:038279569 0 W/38279569-38279569 FN2639-S SNP C -> T AC=2;AN=200;BQB=0.963348;DP=4995;DP4=2614,2095,30,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.61776e-26;MQSB=0.988291;RPB=0.730667;SGB=170.056;VDB=0.820815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.1:38293570 chr01:038293570 0 W/38293570-38293570 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.355327;DP=3139;DP4=1449,1581,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0140172;MQB=0.247295;MQSB=3.58297e-17;RPB=0.87119;SGB=28.7043;VDB=0.984446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.1:38295774 chr01:038295774 0 W/38295774-38295774 FN1179-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2268-S.SNP.1:38315826 chr01:038315826 0 W/38315826-38315826 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.999996;DP=4836;DP4=2358,2178,21,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31227e-16;MQSB=0.998597;RPB=0.844287;SGB=72.1834;VDB=0.835361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.1:38328951 chr01:038328951 0 W/38328951-38328951 FN-341 Single Base Substitution G-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-341.SNP.1:38328952 chr01:038328952 0 W/38328952-38328952 FN-341 Single Base Substitution T-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2652-S.SNP.1:38329087 chr01:038329087 0 W/38329087-38329087 FN2652-S SNP T -> A AC=1;AN=200;BQB=0.99819;DP=5081;DP4=2378,2376,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29326e-14;MQSB=0.845208;RPB=0.474985;SGB=-39.2639;VDB=0.144891;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.1:38336790 chr01:038336790 0 W/38336790-38336790 W426-1-1 Single Base Substitution C-T INTRON HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN-240.SNP.1:38342111 chr01:038342111 0 W/38342111-38342111 FN-240 Single Base Substitution G-A INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN4188-S.SNP.1:38343119 chr01:038343119 0 W/38343119-38343119 FN4188-S SNP G -> A AC=1;AN=170;BQB=0.999392;DP=2278;DP4=1121,1098,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.69925e-08;MQSB=0.87132;RPB=0.841483;SGB=48.6486;VDB=0.337857;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.1:38346787 chr01:038346787 0 W/38346787-38346787 FN3460-S SNP T -> C AC=1;AN=184;BQB=0.678597;DP=3157;DP4=1350,1621,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00285081;MQB=6.2673e-05;MQSB=0.105864;RPB=0.548023;SGB=18.2315;VDB=0.160695;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I26T|963|LOC_Os01g66080|protein_coding|CODING|LOC_Os01g66080.1|1|1) FN1575-S.SNP.1:38353614 chr01:038353614 0 W/38353614-38353614 FN1575-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g66090 retrotransposon protein, putative, unclassified, expressed SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3462-S.SNP.1:38363885 chr01:038363885 0 W/38363885-38363885 FN3462-S SNP C -> A AC=1;AN=184;BQB=0.97938;DP=2802;DP4=1490,1206,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.14875e-06;MQSB=0.906486;RPB=0.583239;SGB=35.1773;VDB=0.712841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.1:38367660 chr01:038367660 0 W/38367660-38367660 FN2337 SNP A -> T AC=1;AN=192;BQB=0.650758;DP=5302;DP4=2635,2284,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.07721e-08;MQSB=0.511308;RPB=0.498038;SGB=39.78;VDB=0.920501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.1:38372520 chr01:038372520 0 W/38372520-38372520 FN2105-S SNP G -> A AC=1;AN=168;BQB=0.634983;DP=2332;DP4=370,1922,4,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18661e-07;MQSB=0.79178;RPB=0.618375;SGB=-13.6493;VDB=0.210963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.1:38374453 chr01:038374453 0 W/38374453-38374453 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.701041;DP=3167;DP4=1590,1394,13,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.89596e-10;MQSB=0.992923;RPB=0.894225;SGB=28.3187;VDB=0.167513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.1:38376929 chr01:038376929 0 W/38376929-38376929 FN2209-S SNP T -> C AC=2;AN=190;BQB=0.0015915;DP=4954;DP4=2256,2120,16,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.39473e-17;MQSB=0.745303;RPB=0.655682;SGB=38.2964;VDB=0.632015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.1:38386333 chr01:038386333 0 W/38386333-38386333 FN2136-S SNP A -> G AC=1;AN=168;BQB=0.155559;DP=3937;DP4=2105,1769,26,27;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.39245e-19;MQSB=0.829886;RPB=0.921748;SGB=-402.268;VDB=0.34492;EFF=UTR_3_PRIME(MODIFIER||359||806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.1|9|1),UTR_3_PRIME(MODIFIER||359||806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.2|8|1) FN2197-S.SNP.1:38387671 chr01:038387671 0 W/38387671-38387671 FN2197-S SNP A -> T AC=1;AN=190;BQB=0.946812;DP=4839;DP4=2431,2005,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43907e-06;MQSB=0.573929;RPB=0.904161;SGB=10.8904;VDB=0.0152419;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A666|806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A666|806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.2|6|1) FN3415-S.SNP.1:38389760 chr01:038389760 0 W/38389760-38389760 FN3415-S SNP C -> A AC=1;AN=184;BQB=0.943758;DP=2362;DP4=1216,1063,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.3607e-10;MQSB=0.999857;RPB=0.899554;SGB=62.3078;VDB=0.344115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A384S|806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A384S|806|LOC_Os01g66110|protein_coding|CODING|LOC_Os01g66110.2|2|1) FN-136.SNP.1:38395048 chr01:038395048 0 W/38395048-38395048 FN-136 Single Base Substitution G-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2492.SNP.1:38430514 chr01:038430514 0 W/38430514-38430514 FN2492 SNP T -> C AC=2;AN=200;BQB=0.988676;DP=4703;DP4=2417,1982,20,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12184e-19;MQSB=0.680894;RPB=0.916581;SGB=137.609;VDB=0.610093;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.1:38435424 chr01:038435424 0 W/38435424-38435424 FN1264-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3964-S.SNP.1:38440229 chr01:038440229 0 W/38440229-38440229 FN3964-S SNP C -> A AC=1;AN=168;BQB=0.99997;DP=1968;DP4=781,1063,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.06288e-07;MQSB=0.838148;RPB=0.997906;SGB=38.1788;VDB=0.664919;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G29C|340|LOC_Os01g66170|protein_coding|CODING|LOC_Os01g66170.1|1|1) FN2201-S.SNP.1:38441528 chr01:038441528 0 W/38441528-38441528 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.717996;DP=4242;DP4=2328,1580,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30217e-09;MQSB=0.982636;RPB=0.968591;SGB=80.9724;VDB=0.429565;EFF=INTERGENIC(MODIFIER||||||||||1) FN3718-S.SNP.1:38442527 chr01:038442527 0 W/38442527-38442527 FN3718-S SNP G -> T AC=2;AN=190;BQB=0.66839;DP=3034;DP4=1445,1450,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.72601e-09;MQSB=0.183607;RPB=0.7467;SGB=46.7622;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.1:38444668 chr01:038444668 0 W/38444668-38444668 FN-198 Single Base Substitution C-T INTRON HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN3548-S.SNP.1:38444668 chr01:038444668 0 W/38444668-38444668 FN3548-S SNP C -> T AC=2;AN=188;BQB=0.999292;DP=2347;DP4=1285,983,10,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.03583e-11;MQSB=0.964057;RPB=0.968923;SGB=71.6954;VDB=0.910077;EFF=INTRON(MODIFIER||||111|LOC_Os01g66180|protein_coding|CODING|LOC_Os01g66180.1|1|1),INTRON(MODIFIER||||87|LOC_Os01g66180|protein_coding|CODING|LOC_Os01g66180.2|1|1) FN1301-S.SNP.1:38450785 chr01:038450785 0 W/38450785-38450785 FN1301-S Single Base Substitution C-A INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3389-S.SNP.1:38453771 chr01:038453771 0 W/38453771-38453771 FN3389-S SNP C -> A AC=1;AN=184;BQB=0.720088;DP=3506;DP4=1887,1477,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.81649e-07;MQSB=0.0536046;RPB=0.854667;SGB=84.9167;VDB=0.517992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.1:38464174 chr01:038464174 0 W/38464174-38464174 FN2365 SNP C -> T AC=1;AN=192;BQB=0.824622;DP=4781;DP4=2320,2173,4,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.30723e-07;MQSB=0.994183;RPB=0.634456;SGB=44.6462;VDB=0.233702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V88I|88|LOC_Os01g66210|protein_coding|CODING|LOC_Os01g66210.1|4|1) FN2491.SNP.1:38466652 chr01:038466652 0 W/38466652-38466652 FN2491 SNP G -> T AC=2;AN=200;BQB=0.247128;DP=2554;DP4=1053,1319,10,6;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00352388;MQB=0.0110213;MQSB=0.00681427;RPB=0.897172;SGB=47.4799;VDB=0.767095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3980-S.SNP.1:38469201 chr01:038469201 0 W/38469201-38469201 FN3980-S SNP A -> C AC=1;AN=168;BQB=0.939628;DP=2519;DP4=1172,1257,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.9018e-07;MQSB=0.969585;RPB=0.985031;SGB=47.7421;VDB=0.171414;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.1:38478391 chr01:038478391 0 W/38478391-38478391 FN507-S Single Base Substitution A-T INTRON HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN2390.SNP.1:38485685 chr01:038485685 0 W/38485685-38485685 FN2390 SNP C -> A AC=1;AN=200;BQB=0.964379;DP=3933;DP4=2024,1590,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000254259;MQB=1.24011e-12;MQSB=0.560954;RPB=0.998359;SGB=109.527;VDB=0.287499;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.1:38490213 chr01:038490213 0 W/38490213-38490213 FN3661-S SNP A -> G AC=1;AN=190;BQB=0.875475;DP=2352;DP4=1386,856,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37825e-07;MQSB=0.243865;RPB=0.311442;SGB=13.4442;VDB=0.755668;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.1:38493256 chr01:038493256 0 W/38493256-38493256 FN-35 Single Base Substitution C-G INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN2339.SNP.1:38494555 chr01:038494555 0 W/38494555-38494555 FN2339 SNP C -> T AC=1;AN=192;BQB=0.554375;DP=4107;DP4=1289,2385,3,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.89795e-09;MQSB=0.145961;RPB=0.407411;SGB=7.3548;VDB=0.761533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.1:38498349 chr01:038498349 0 W/38498349-38498349 FN1384-S Single Base Substitution G-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN793-S.SNP.1:38500802 chr01:038500802 0 W/38500802-38500802 FN793-S Single Base Substitution G-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1113-S.SNP.1:38507297 chr01:038507297 0 W/38507297-38507297 FN1113-S Single Base Substitution G-A INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1065-S.SNP.1:38517452 chr01:038517452 0 W/38517452-38517452 FN1065-S Single Base Substitution G-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1288-S.SNP.1:38520174 chr01:038520174 0 W/38520174-38520174 FN1288-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1455-S.SNP.1:38530708 chr01:038530708 0 W/38530708-38530708 FN1455-S Single Base Substitution T-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN4300-S.SNP.1:38533961 chr01:038533961 0 W/38533961-38533961 FN4300-S SNP G -> A AC=1;AN=170;BQB=0.979671;DP=2357;DP4=1051,1265,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.02175e-05;MQSB=0.80486;RPB=0.987169;SGB=30.1021;VDB=0.933643;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.1:38536388 chr01:038536388 0 W/38536388-38536388 FN-105 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os01g66350 DUF647 domain containing protein, putative, expressed SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. W427-1-1.SNP.1:38539638 chr01:038539638 0 W/38539638-38539638 W427-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g66350 DUF647 domain containing protein, putative, expressed SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3914-S.SNP.1:38540602 chr01:038540602 0 W/38540602-38540602 FN3914-S SNP T -> C AC=2;AN=158;BQB=0.480561;DP=2490;DP4=901,1470,11,22;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.56973e-15;MQSB=0.973777;RPB=0.997985;SGB=64.0993;VDB=0.352902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.1:38540972 chr01:038540972 0 W/38540972-38540972 FN2328 SNP C -> T AC=2;AN=192;BQB=0.171076;DP=4265;DP4=2021,1990,25,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.12272e-22;MQSB=0.115464;RPB=0.923997;SGB=150.275;VDB=0.0269522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.1:38558000 chr01:038558000 0 W/38558000-38558000 FN1135-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1135-S.SNP.1:38558002 chr01:038558002 0 W/38558002-38558002 FN1135-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g66379 expressed protein SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1117-S.SNP.1:38562381 chr01:038562381 0 W/38562381-38562381 FN1117-S Single Base Substitution G-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1442-S.SNP.1:38572294 chr01:038572294 0 W/38572294-38572294 FN1442-S Single Base Substitution A-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3517-S.SNP.1:38573953 chr01:038573953 0 W/38573953-38573953 FN3517-S SNP A -> G AC=1;AN=188;BQB=0.993953;DP=2988;DP4=1622,1153,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.72344e-08;MQSB=0.921308;RPB=0.774972;SGB=46.6141;VDB=0.51626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.1:38580814 chr01:038580814 0 W/38580814-38580814 FN2174-S SNP G -> T AC=1;AN=168;BQB=0.0174359;DP=2635;DP4=1350,1243,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00108399;MQSB=0.953359;RPB=0.735085;SGB=-74.9395;VDB=0.318138;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.1:38585867 chr01:038585867 0 W/38585867-38585867 FN-107 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g66460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN707-S.SNP.1:38588814 chr01:038588814 0 W/38588814-38588814 FN707-S Single Base Substitution T-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2461.SNP.1:38589447 chr01:038589447 0 W/38589447-38589447 FN2461 SNP C -> T AC=1;AN=200;BQB=0.805678;DP=4366;DP4=1984,2083,7,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00137426;MQB=1.13898e-07;MQSB=0.519253;RPB=0.983627;SGB=54.2646;VDB=0.00732149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R707Q|879|LOC_Os01g66470|protein_coding|CODING|LOC_Os01g66470.1|3|1) FN3797-S.SNP.1:38603793 chr01:038603793 0 W/38603793-38603793 FN3797-S SNP C -> T AC=1;AN=190;BQB=0.886877;DP=1723;DP4=783,859,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000580383;MQB=0.000489349;MQSB=0.0024817;RPB=0.229945;SGB=26.3271;VDB=0.232635;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.1:38609642 chr01:038609642 0 W/38609642-38609642 FN4050-S SNP C -> G AC=2;AN=168;BQB=0.287265;DP=2819;DP4=1280,1387,19,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.67872e-19;MQSB=0.704963;RPB=0.847338;SGB=87.8168;VDB=0.20334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.1:38611455 chr01:038611455 0 W/38611455-38611455 FN4031-S SNP C -> G AC=1;AN=168;BQB=0.892968;DP=2407;DP4=1122,1190,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.5969e-07;MQSB=0.940239;RPB=0.971835;SGB=43.3113;VDB=0.513951;EFF=UTR_5_PRIME(MODIFIER||326||452|LOC_Os01g66490|protein_coding|CODING|LOC_Os01g66490.1|1|1) FN1470-S.SNP.1:38613823 chr01:038613823 0 W/38613823-38613823 FN1470-S Single Base Substitution G-C UTR_3_PRIME Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3450-S.SNP.1:38625615 chr01:038625615 0 W/38625615-38625615 FN3450-S SNP T -> G AC=1;AN=184;BQB=0.478057;DP=2887;DP4=1381,1327,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00579915;MQSB=0.999563;RPB=0.742998;SGB=35.1773;VDB=0.615174;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.1:38629515 chr01:038629515 0 W/38629515-38629515 FN2541-S SNP A -> G AC=1;AN=198;BQB=0.571243;DP=4393;DP4=2053,2095,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35478e-12;MQSB=0.999508;RPB=0.888313;SGB=95.5;VDB=0.623515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I189V|502|LOC_Os01g66510|protein_coding|CODING|LOC_Os01g66510.1|5|1) FN3830-S.SNP.1:38631803 chr01:038631803 0 W/38631803-38631803 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.911356;DP=2615;DP4=1238,1271,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33135e-10;MQSB=0.63221;RPB=0.977266;SGB=76.4186;VDB=0.988588;EFF=UTR_3_PRIME(MODIFIER||365||491|LOC_Os01g66520|protein_coding|CODING|LOC_Os01g66520.1|13|1),UTR_3_PRIME(MODIFIER||222||502|LOC_Os01g66510|protein_coding|CODING|LOC_Os01g66510.1|14|1) FN4094-S.SNP.1:38641455 chr01:038641455 0 W/38641455-38641455 FN4094-S SNP T -> A AC=1;AN=182;BQB=0.946056;DP=3038;DP4=1192,1588,11,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.53222e-08;MQSB=0.936097;RPB=0.831136;SGB=28.1658;VDB=0.833991;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.1:38649481 chr01:038649481 0 W/38649481-38649481 FN1537-S Single Base Substitution G-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3465-S.SNP.1:38650684 chr01:038650684 0 W/38650684-38650684 FN3465-S SNP G -> T AC=2;AN=184;BQB=0.692387;DP=2755;DP4=1332,1313,21,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.87361e-17;MQSB=0.961315;RPB=0.941556;SGB=166.309;VDB=0.983343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E37D|669|LOC_Os01g66560|protein_coding|CODING|LOC_Os01g66560.1|1|1) FN1036-S.SNP.1:38653332 chr01:038653332 0 W/38653332-38653332 FN1036-S Single Base Substitution G-T INTRON HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1658-S.SNP.1:38653332 chr01:038653332 0 W/38653332-38653332 FN1658-S SNP G -> T AC=2;AN=188;BQB=0.529766;DP=4178;DP4=1892,2231,21,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.99344e-17;MQSB=0.938798;RPB=0.990733;SGB=-233.564;VDB=0.967182;EFF=INTRON(MODIFIER||||669|LOC_Os01g66560|protein_coding|CODING|LOC_Os01g66560.1|5|1) FN2118-S.SNP.1:38653332 chr01:038653332 0 W/38653332-38653332 FN2118-S SNP G -> T AC=1;AN=168;BQB=0.0587668;DP=3669;DP4=1838,1791,19,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28818e-11;MQSB=0.987062;RPB=0.764667;SGB=-75.914;VDB=0.772379;EFF=INTRON(MODIFIER||||669|LOC_Os01g66560|protein_coding|CODING|LOC_Os01g66560.1|5|1) FN811-S.SNP.1:38653332 chr01:038653332 0 W/38653332-38653332 FN811-S Single Base Substitution G-T INTRON HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1537-S.SNP.1:38657749 chr01:038657749 0 W/38657749-38657749 FN1537-S Single Base Substitution C-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3927-S.SNP.1:38662988 chr01:038662988 0 W/38662988-38662988 FN3927-S SNP T -> A AC=1;AN=158;BQB=0.95679;DP=2337;DP4=1134,1105,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.03832e-09;MQSB=0.99987;RPB=0.416953;SGB=50.9207;VDB=0.176033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.1:38671582 chr01:038671582 0 W/38671582-38671582 FN1012-S Single Base Substitution T-C INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1596-S.SNP.1:38672184 chr01:038672184 0 W/38672184-38672184 FN1596-S Single Base Substitution G-A INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN-59.SNP.1:38675962 chr01:038675962 0 W/38675962-38675962 FN-59 Single Base Substitution T-C INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1114-S.SNP.1:38676085 chr01:038676085 0 W/38676085-38676085 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN989-S.SNP.1:38693008 chr01:038693008 0 W/38693008-38693008 FN989-S Single Base Substitution A-T INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1284-S.SNP.1:38693501 chr01:038693501 0 W/38693501-38693501 FN1284-S Single Base Substitution C-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN1284-S.SNP.1:38693502 chr01:038693502 0 W/38693502-38693502 FN1284-S Single Base Substitution A-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3999-S.SNP.1:38701690 chr01:038701690 0 W/38701690-38701690 FN3999-S SNP G -> A AC=1;AN=168;BQB=0.996629;DP=1966;DP4=756,1136,2,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000726529;MQSB=7.76413e-10;RPB=0.734534;SGB=25.5891;VDB=0.750734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.1:38708048 chr01:038708048 0 W/38708048-38708048 FN1385-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3861-S.SNP.1:38710315 chr01:038710315 0 W/38710315-38710315 FN3861-S SNP G -> T AC=1;AN=158;BQB=0.943695;DP=2542;DP4=1392,1021,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.20369e-05;MQSB=0.861921;RPB=0.767066;SGB=29.5899;VDB=0.473837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.1:38720334 chr01:038720334 0 W/38720334-38720334 FN1206-S Single Base Substitution C-T INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN457-S.SNP.1:38720417 chr01:038720417 0 W/38720417-38720417 FN457-S Single Base Substitution T-C INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN2547-S.SNP.1:38722137 chr01:038722137 0 W/38722137-38722137 FN2547-S SNP G -> T AC=1;AN=198;BQB=0.977645;DP=4348;DP4=2378,1721,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.58358e-08;MQSB=0.868937;RPB=0.972079;SGB=9.3494;VDB=0.942765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.1:38726506 chr01:038726506 0 W/38726506-38726506 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.948161;DP=2978;DP4=1253,1651,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.54396e-05;MQSB=0.984698;RPB=0.954596;SGB=35.3493;VDB=0.854392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.1:38726659 chr01:038726659 0 W/38726659-38726659 FN1264-S Single Base Substitution G-A INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN2191-S.SNP.1:38730251 chr01:038730251 0 W/38730251-38730251 FN2191-S SNP T -> C AC=1;AN=190;BQB=0.916331;DP=4090;DP4=1674,2120,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.32864e-06;MQSB=0.787212;RPB=0.689675;SGB=21.1058;VDB=0.902698;EFF=INTRON(MODIFIER||||748|LOC_Os01g66680|protein_coding|CODING|LOC_Os01g66680.1|2|1) FN3376-S.SNP.1:38731392 chr01:038731392 0 W/38731392-38731392 FN3376-S SNP A -> T AC=1;AN=184;BQB=0.869508;DP=3364;DP4=1724,1452,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.17129e-13;MQSB=0.993899;RPB=0.969255;SGB=98.4821;VDB=0.0835116;EFF=INTRON(MODIFIER||||748|LOC_Os01g66680|protein_coding|CODING|LOC_Os01g66680.1|4|1) FN2589-S.SNP.1:38738537 chr01:038738537 0 W/38738537-38738537 FN2589-S SNP T -> G AC=1;AN=198;BQB=0.968498;DP=4190;DP4=2024,1991,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.95321e-07;MQSB=0.994899;RPB=0.978497;SGB=32.9588;VDB=0.38912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L584R|953|LOC_Os01g66690|protein_coding|CODING|LOC_Os01g66690.1|4|1) FN1468-S.SNP.1:38742937 chr01:038742937 0 W/38742937-38742937 FN1468-S Single Base Substitution T-C INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1623-S.SNP.1:38743929 chr01:038743929 0 W/38743929-38743929 FN1623-S Single Base Substitution C-T INTRON Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1333-S.SNP.1:38746306 chr01:038746306 0 W/38746306-38746306 FN1333-S Single Base Substitution G-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3057-S.SNP.1:38763171 chr01:038763171 0 W/38763171-38763171 FN3057-S SNP C -> G AC=1;AN=184;BQB=0.560464;DP=2829;DP4=1561,1167,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.51799e-08;MQSB=0.99535;RPB=0.595891;SGB=20.7533;VDB=0.915248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.1:38766325 chr01:038766325 0 W/38766325-38766325 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.477145;DP=2909;DP4=1352,1465,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.52427e-10;MQSB=0.99962;RPB=0.498862;SGB=64.5316;VDB=0.73619;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.1:38773988 chr01:038773988 0 W/38773988-38773988 FN860-S Single Base Substitution T-A INTERGENIC HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN-259.SNP.1:38783442 chr01:038783442 0 W/38783442-38783442 FN-259 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g66790 retrotransposon protein, putative, unclassified, expressed SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN454-S.SNP.1:38784738 chr01:038784738 0 W/38784738-38784738 FN454-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g66790 retrotransposon protein, putative, unclassified, expressed SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN1472-S.SNP.1:38785742 chr01:038785742 0 W/38785742-38785742 FN1472-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os01g66790 retrotransposon protein, putative, unclassified, expressed SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2529-S.SNP.1:38793771 chr01:038793771 0 W/38793771-38793771 FN2529-S SNP T -> A AC=2;AN=198;BQB=0.833416;DP=4277;DP4=2047,2058,12,17;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.41234e-13;MQSB=0.963973;RPB=0.987239;SGB=94.0758;VDB=0.648196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.1:38798575 chr01:038798575 0 W/38798575-38798575 FN2209-S SNP A -> T AC=1;AN=190;BQB=0.437857;DP=4959;DP4=2163,2441,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201654;MQB=2.4165e-07;MQSB=0.922383;RPB=0.980982;SGB=18.552;VDB=0.209572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.1:38799847 chr01:038799847 0 W/38799847-38799847 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.953001;DP=5164;DP4=2391,2472,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43482e-18;MQSB=0.991507;RPB=0.95355;SGB=115.978;VDB=0.561779;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.1:38805247 chr01:038805247 0 W/38805247-38805247 FN4311-S SNP A -> T AC=1;AN=170;BQB=0.647235;DP=2916;DP4=1518,1279,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.92419e-06;MQSB=0.519477;RPB=0.207354;SGB=34.5445;VDB=0.594468;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.1:38808240 chr01:038808240 0 W/38808240-38808240 FN2209-S SNP G -> A AC=2;AN=190;BQB=0.920269;DP=5347;DP4=2705,2233,29,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000374042;MQB=2.83439e-29;MQSB=0.883212;RPB=0.999845;SGB=-51.9388;VDB=0.257621;EFF=INTRON(MODIFIER||||400|LOC_Os01g66840|protein_coding|CODING|LOC_Os01g66840.1|9|1) FN2626-S.SNP.1:38824419 chr01:038824419 0 W/38824419-38824419 FN2626-S SNP G -> C AC=1;AN=200;BQB=0.756841;DP=5282;DP4=2514,2445,2,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.44876e-05;MQSB=0.9195;RPB=0.921867;SGB=26.6347;VDB=0.697793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.1:38831365 chr01:038831365 0 W/38831365-38831365 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.176805;DP=3112;DP4=1331,1275,14,14;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.371144;MQB=0.228197;MQSB=1.34232e-34;RPB=0.0897162;SGB=25.5416;VDB=0.684395;EFF=INTRON(MODIFIER||||2579|LOC_Os01g66870|protein_coding|CODING|LOC_Os01g66870.1|6|1) FN1233-S.SNP.1:38836083 chr01:038836083 0 W/38836083-38836083 FN1233-S Single Base Substitution C-A INTRON HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN2673-S.SNP.1:38836741 chr01:038836741 0 W/38836741-38836741 FN2673-S SNP T -> A AC=1;AN=200;BQB=0.00436131;DP=4400;DP4=2564,1531,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.88505e-06;MQSB=0.0133977;RPB=0.876218;SGB=40.2696;VDB=0.720497;EFF=INTRON(MODIFIER||||2579|LOC_Os01g66870|protein_coding|CODING|LOC_Os01g66870.1|3|1) FN1123-S.SNP.1:38849941 chr01:038849941 0 W/38849941-38849941 FN1123-S Single Base Substitution C-T INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN3527-S.SNP.1:38855779 chr01:038855779 0 W/38855779-38855779 FN3527-S SNP G -> A AC=2;AN=188;BQB=0.457428;DP=2981;DP4=1547,1351,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.27997e-10;MQSB=0.987547;RPB=0.301089;SGB=89.8686;VDB=0.420307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.1:38863709 chr01:038863709 0 W/38863709-38863709 FN2579-S SNP A -> G AC=1;AN=188;BQB=0.447764;DP=3814;DP4=1650,1945,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.95965e-07;MQSB=0.684126;RPB=0.995981;SGB=4.56404;VDB=0.644387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1698-S.SNP.1:38878551 chr01:038878551 0 W/38878551-38878551 FN1698-S SNP T -> A AC=1;AN=188;BQB=0.041468;DP=3946;DP4=1548,2329,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00317779;MQSB=0.930123;RPB=0.559345;SGB=-149.141;VDB=0.676573;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.1:38878551 chr01:038878551 0 W/38878551-38878551 FN2646-S SNP T -> A AC=2;AN=200;BQB=0.475673;DP=5366;DP4=2774,2340,27,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.35169e-25;MQSB=0.909279;RPB=0.960616;SGB=107.64;VDB=0.166209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.1:38878551 chr01:038878551 0 W/38878551-38878551 FN3902-S SNP T -> A AC=1;AN=158;BQB=0.999999;DP=2787;DP4=1473,1239,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.48727e-09;MQSB=0.687078;RPB=0.812829;SGB=26.1881;VDB=0.474005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.1:38881855 chr01:038881855 0 W/38881855-38881855 FN1475-S Single Base Substitution C-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN947-S.SNP.1:38884373 chr01:038884373 0 W/38884373-38884373 FN947-S Single Base Substitution G-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1025-S.SNP.1:38913014 chr01:038913014 0 W/38913014-38913014 FN1025-S Single Base Substitution A-T INTRON HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1271-S.SNP.1:38918749 chr01:038918749 0 W/38918749-38918749 FN1271-S Single Base Substitution G-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2596-S.SNP.1:38935286 chr01:038935286 0 W/38935286-38935286 FN2596-S SNP G -> T AC=1;AN=198;BQB=0.949644;DP=4059;DP4=1890,1951,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.7713e-06;MQSB=0.175741;RPB=0.742921;SGB=44.9538;VDB=0.00265764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.1:38935564 chr01:038935564 0 W/38935564-38935564 FN1711-S SNP C -> T AC=2;AN=188;BQB=0.113758;DP=2351;DP4=1285,984,24,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.49814e-07;MQSB=0.823686;RPB=0.951802;SGB=-75.0128;VDB=0.0160027;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.1:38938141 chr01:038938141 0 W/38938141-38938141 FN3933-S SNP G -> A AC=2;AN=158;BQB=0.998242;DP=2628;DP4=1287,1234,11,12;HOB=0.024996;ICB=0.493752;MQ=38;MQ0F=0.0403349;MQB=0.392034;MQSB=5.18291e-15;RPB=0.997612;SGB=95.131;VDB=0.934219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.1:38938733 chr01:038938733 0 W/38938733-38938733 FN1695-S SNP T -> C AC=1;AN=188;BQB=0.991413;DP=2433;DP4=785,1594,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000411015;MQB=1.68925e-05;MQSB=0.46929;RPB=0.644488;SGB=43.0708;VDB=0.00607304;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.1:38940734 chr01:038940734 0 W/38940734-38940734 FN4022-S SNP C -> T AC=2;AN=168;BQB=0.846833;DP=2051;DP4=956,968,6,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.17618e-11;MQSB=0.888073;RPB=0.0219227;SGB=41.6313;VDB=0.0325133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.1:38953723 chr01:038953723 0 W/38953723-38953723 FN2304 SNP G -> A AC=2;AN=192;BQB=0.534434;DP=4697;DP4=2382,2027,28,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.3017e-29;MQSB=0.901789;RPB=0.415552;SGB=196.611;VDB=0.349069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D21N|896|LOC_Os01g67100|protein_coding|CODING|LOC_Os01g67100.1|1|1) FN1257-S.SNP.1:38955041 chr01:038955041 0 W/38955041-38955041 FN1257-S Single Base Substitution C-T INTRON HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2377.SNP.1:38965678 chr01:038965678 0 W/38965678-38965678 FN2377 SNP A -> T AC=1;AN=192;BQB=0.102476;DP=4281;DP4=1526,1920,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.20514e-13;MQSB=0.445039;RPB=0.181204;SGB=-70.2434;VDB=0.285781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L93H|623|LOC_Os01g67120|protein_coding|CODING|LOC_Os01g67120.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L93H|560|LOC_Os01g67120|protein_coding|CODING|LOC_Os01g67120.2|2|1) FN1585-S.SNP.1:38967295 chr01:038967295 0 W/38967295-38967295 FN1585-S Single Base Substitution G-A INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3448-S.SNP.1:38969335 chr01:038969335 0 W/38969335-38969335 FN3448-S SNP C -> A AC=2;AN=184;BQB=0.993814;DP=2737;DP4=1311,1352,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.28075e-13;MQSB=0.837743;RPB=0.998154;SGB=74.4875;VDB=0.00208996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.1:38970241 chr01:038970241 0 W/38970241-38970241 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.986252;DP=3266;DP4=1494,1740,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0;MQB=0.86704;MQSB=0.393442;RPB=0.694429;SGB=26.0762;VDB=0.77123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.1:38970513 chr01:038970513 0 W/38970513-38970513 FN1371-S Single Base Substitution A-G INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN534-S.SNP.1:38972098 chr01:038972098 0 W/38972098-38972098 FN534-S Single Base Substitution C-T INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3285-S.SNP.1:38984093 chr01:038984093 0 W/38984093-38984093 FN3285-S SNP C -> T AC=1;AN=184;BQB=0.879417;DP=1767;DP4=756,843,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000232131;MQSB=0.645029;RPB=0.871633;SGB=28.7043;VDB=0.109757;EFF=INTERGENIC(MODIFIER||||||||||1) FN-171.SNP.1:38985271 chr01:038985271 0 W/38985271-38985271 FN-171 Single Base Substitution T-C INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1086-S.SNP.1:38985634 chr01:038985634 0 W/38985634-38985634 FN1086-S Single Base Substitution T-C INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2480.SNP.1:38988359 chr01:038988359 0 W/38988359-38988359 FN2480 SNP G -> T AC=1;AN=200;BQB=0.934227;DP=4954;DP4=2357,2302,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.46254e-07;MQSB=0.931475;RPB=0.999401;SGB=16.4591;VDB=0.614492;EFF=INTRON(MODIFIER||||509|LOC_Os01g67170|protein_coding|CODING|LOC_Os01g67170.1|2|1) FN3976-S.SNP.1:38998223 chr01:038998223 0 W/38998223-38998223 FN3976-S SNP T -> A AC=1;AN=168;BQB=0.99911;DP=2591;DP4=1249,1021,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34256e-06;MQSB=0.509421;RPB=0.838323;SGB=4.1907;VDB=0.648217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.1:39010597 chr01:039010597 0 W/39010597-39010597 FN2291 SNP A -> C AC=1;AN=192;BQB=0.991901;DP=4991;DP4=2215,2344,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200361;MQB=2.19504e-12;MQSB=0.971308;RPB=0.948547;SGB=-11.9469;VDB=0.706747;EFF=UTR_3_PRIME(MODIFIER||820||483|LOC_Os01g67220|protein_coding|CODING|LOC_Os01g67220.2|14|1) FN_543-2-6.SNP.1:39017877 chr01:039017877 0 W/39017877-39017877 FN_543-2-6 Single Base Substitution G-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3835-S.SNP.1:39030340 chr01:039030340 0 W/39030340-39030340 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.999095;DP=2564;DP4=1136,1336,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00915e-09;MQSB=0.99997;RPB=0.99623;SGB=43.2083;VDB=0.551312;EFF=INTRON(MODIFIER||||1055|LOC_Os01g67250|protein_coding|CODING|LOC_Os01g67250.1|5|1),INTRON(MODIFIER||||957|LOC_Os01g67250|protein_coding|CODING|LOC_Os01g67250.2|5|1) FN571-S.SNP.1:39034676 chr01:039034676 0 W/39034676-39034676 FN571-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1424-S.SNP.1:39038186 chr01:039038186 0 W/39038186-39038186 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3368-S.SNP.1:39039411 chr01:039039411 0 W/39039411-39039411 FN3368-S SNP A -> G AC=1;AN=184;BQB=0.797232;DP=3068;DP4=1721,1248,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000193979;MQSB=0.81635;RPB=0.743833;SGB=39.699;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.1:39049527 chr01:039049527 0 W/39049527-39049527 FN2580-S SNP A -> G AC=1;AN=198;BQB=0.352339;DP=4088;DP4=2099,1802,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.55982e-16;MQSB=0.999741;RPB=0.872942;SGB=123.071;VDB=0.947976;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.1:39049603 chr01:039049603 0 W/39049603-39049603 FN1327-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3896-S.SNP.1:39051890 chr01:039051890 0 W/39051890-39051890 FN3896-S SNP A -> G AC=1;AN=158;BQB=0.999985;DP=2573;DP4=1562,842,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.8889e-09;MQSB=0.316661;RPB=0.846451;SGB=44.1818;VDB=0.715153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.1:39056925 chr01:039056925 0 W/39056925-39056925 FN3849-S SNP G -> C AC=1;AN=158;BQB=0.743761;DP=2450;DP4=1250,1127,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.01911e-09;MQSB=0.997753;RPB=0.999801;SGB=44.1818;VDB=0.8828;EFF=INTRON(MODIFIER||||980|LOC_Os01g67290|protein_coding|CODING|LOC_Os01g67290.1|5|1),INTRON(MODIFIER||||936|LOC_Os01g67290|protein_coding|CODING|LOC_Os01g67290.2|5|1) FN725-S.SNP.1:39059943 chr01:039059943 0 W/39059943-39059943 FN725-S Single Base Substitution A-G INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2572-S.SNP.1:39061965 chr01:039061965 0 W/39061965-39061965 FN2572-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1058-S.SNP.1:39063355 chr01:039063355 0 W/39063355-39063355 FN1058-S Single Base Substitution C-T INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2691-S.SNP.1:39064069 chr01:039064069 0 W/39064069-39064069 FN2691-S SNP G -> T AC=1;AN=200;BQB=0.33301;DP=4921;DP4=2122,2541,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.03327e-10;MQSB=0.812167;RPB=0.94531;SGB=63.4749;VDB=0.421428;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V93F|204|LOC_Os01g67300|protein_coding|CODING|LOC_Os01g67300.1|3|1) FN2444.SNP.1:39073520 chr01:039073520 0 W/39073520-39073520 FN2444 SNP C -> T AC=1;AN=200;BQB=0.771726;DP=4795;DP4=2412,2130,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000417101;MQB=6.08298e-14;MQSB=0.733699;RPB=0.556965;SGB=50.3263;VDB=0.362354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.1:39074893 chr01:039074893 0 W/39074893-39074893 FN3670-S SNP G -> A AC=1;AN=190;BQB=0.988473;DP=3282;DP4=1658,1537,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.78859e-07;MQSB=0.992831;RPB=0.896376;SGB=32.5467;VDB=0.250675;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.1:39075748 chr01:039075748 0 W/39075748-39075748 FN424-S Single Base Substitution C-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3693-S.SNP.1:39077327 chr01:039077327 0 W/39077327-39077327 FN3693-S SNP G -> A AC=1;AN=190;BQB=0.8811;DP=2306;DP4=1139,1045,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000112595;MQSB=0.236494;RPB=0.38197;SGB=44.5415;VDB=0.146531;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.1:39084270 chr01:039084270 0 W/39084270-39084270 W22-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1217-S.SNP.1:39092256 chr01:039092256 0 W/39092256-39092256 FN1217-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g67340 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3828-S.SNP.1:39092354 chr01:039092354 0 W/39092354-39092354 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.968661;DP=2509;DP4=1208,1235,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.00307e-09;MQSB=0.976949;RPB=0.3513;SGB=53.6492;VDB=0.531485;EFF=INTRON(MODIFIER||||369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.1|7|1),INTRON(MODIFIER||||369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.2|6|1),INTRON(MODIFIER||||369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.3|7|1) FN3394-S.SNP.1:39093424 chr01:039093424 0 W/39093424-39093424 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.967227;DP=2736;DP4=1272,1382,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54086e-08;MQSB=0.941957;RPB=0.99483;SGB=53.2642;VDB=0.437875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D174N|369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D174N|369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D174N|369|LOC_Os01g67340|protein_coding|CODING|LOC_Os01g67340.3|5|1) FN1468-S.SNP.1:39098066 chr01:039098066 0 W/39098066-39098066 FN1468-S Single Base Substitution C-G INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN2375.SNP.1:39119014 chr01:039119014 0 W/39119014-39119014 FN2375 SNP C -> T AC=1;AN=192;BQB=0.91067;DP=5162;DP4=2685,2139,15,6;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0220845;MQB=0.0375602;MQSB=0.10554;RPB=0.839222;SGB=64.7304;VDB=0.159777;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.1:39121804 chr01:039121804 0 W/39121804-39121804 FN_N1-213-1 Single Base Substitution G-C HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1699-S.SNP.1:39128664 chr01:039128664 0 W/39128664-39128664 FN1699-S SNP C -> T AC=1;AN=188;BQB=0.760861;DP=3183;DP4=1538,1608,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26362e-06;MQSB=0.989657;RPB=0.53451;SGB=-14.9998;VDB=0.864501;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.1:39129615 chr01:039129615 0 W/39129615-39129615 FN3862-S SNP T -> A AC=1;AN=158;BQB=0.998506;DP=2636;DP4=1234,1318,4,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65404e-08;MQSB=0.987866;RPB=0.835671;SGB=21.4493;VDB=0.511433;EFF=INTERGENIC(MODIFIER||||||||||1) FN_841-7-2.SNP.1:39148546 chr01:039148546 0 W/39148546-39148546 FN_841-7-2 Single Base Substitution A-G HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2730-S.SNP.1:39149412 chr01:039149412 0 W/39149412-39149412 FN2730-S SNP G -> A AC=2;AN=200;BQB=0.838646;DP=4897;DP4=2251,2402,14,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14855e-18;MQSB=0.962712;RPB=0.882392;SGB=97.9523;VDB=0.618488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.1:39151345 chr01:039151345 0 W/39151345-39151345 FN2450 SNP T -> C AC=1;AN=200;BQB=0.977625;DP=4063;DP4=1841,2043,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99214e-06;MQSB=0.291834;RPB=0.493106;SGB=22.2439;VDB=0.460862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.1:39153452 chr01:039153452 0 W/39153452-39153452 FN1403-S Single Base Substitution A-C INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2440.SNP.1:39153960 chr01:039153960 0 W/39153960-39153960 FN2440 SNP A -> T AC=1;AN=200;BQB=0.429161;DP=5349;DP4=2686,2289,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.67231e-16;MQSB=0.817081;RPB=0.379288;SGB=79.9264;VDB=0.409263;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.1:39155533 chr01:039155533 0 W/39155533-39155533 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.969477;DP=2302;DP4=1281,909,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01822e-06;MQSB=0.826694;RPB=0.996901;SGB=58.2031;VDB=0.72876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.1:39159341 chr01:039159341 0 W/39159341-39159341 FN2496 SNP A -> G AC=2;AN=200;BQB=0.378889;DP=4485;DP4=1908,2292,19,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81602e-19;MQSB=0.475632;RPB=0.836446;SGB=126.794;VDB=0.3577;EFF=INTRON(MODIFIER||||773|LOC_Os01g67420|protein_coding|CODING|LOC_Os01g67420.1|2|1) FN3714-S.SNP.1:39160822 chr01:039160822 0 W/39160822-39160822 FN3714-S SNP G -> T AC=2;AN=190;BQB=0.748631;DP=908;DP4=473,132,14,2;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.000121747;MQSB=0.0696911;RPB=0.457774;SGB=51.5488;VDB=0.749428;EFF=INTRON(MODIFIER||||773|LOC_Os01g67420|protein_coding|CODING|LOC_Os01g67420.1|6|1) FN-313.SNP.1:39162760 chr01:039162760 0 W/39162760-39162760 FN-313 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g67420 lipase, putative, expressed SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1103-S.SNP.1:39165388 chr01:039165388 0 W/39165388-39165388 FN1103-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3429-S.SNP.1:39181584 chr01:039181584 0 W/39181584-39181584 FN3429-S SNP C -> A AC=1;AN=184;BQB=0.384317;DP=3991;DP4=2046,1832,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0250564;MQB=0.0467044;MQSB=0.0166762;RPB=0.954561;SGB=3.75875;VDB=0.942531;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.1:39182346 chr01:039182346 0 W/39182346-39182346 FN282-S Single Base Substitution C-A INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2493.SNP.1:39190180 chr01:039190180 0 W/39190180-39190180 FN2493 SNP T -> A AC=1;AN=200;BQB=0.467485;DP=4733;DP4=2264,2152,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.88527e-11;MQSB=0.74682;RPB=0.994835;SGB=72.6852;VDB=0.376003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.1:39190183 chr01:039190183 0 W/39190183-39190183 FN2493 SNP T -> C AC=1;AN=200;BQB=0.409641;DP=4734;DP4=2308,2088,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.57632e-10;MQSB=0.726733;RPB=0.531914;SGB=58.2954;VDB=0.283457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.1:39192244 chr01:039192244 0 W/39192244-39192244 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.202809;DP=2941;DP4=1524,1322,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000124072;MQSB=0.87259;RPB=0.85469;SGB=15.9981;VDB=0.585871;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.1:39194785 chr01:039194785 0 W/39194785-39194785 FN769-S Single Base Substitution C-T INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN-235.SNP.1:39197333 chr01:039197333 0 W/39197333-39197333 FN-235 Single Base Substitution C-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1097-S.SNP.1:39200671 chr01:039200671 0 W/39200671-39200671 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1102-S.SNP.1:39203902 chr01:039203902 0 W/39203902-39203902 FN1102-S Single Base Substitution C-T INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1102-S.SNP.1:39203907 chr01:039203907 0 W/39203907-39203907 FN1102-S Single Base Substitution A-T INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2296.SNP.1:39209251 chr01:039209251 0 W/39209251-39209251 FN2296 SNP G -> A AC=1;AN=192;BQB=0.97607;DP=4986;DP4=2416,2273,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.32756e-09;MQSB=0.648918;RPB=0.977055;SGB=21.2209;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN-20.SNP.1:39211260 chr01:039211260 0 W/39211260-39211260 FN-20 Single Base Substitution C-T INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN244-S.SNP.1:39221662 chr01:039221662 0 W/39221662-39221662 FN244-S Single Base Substitution T-G INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-114.SNP.1:39238438 chr01:039238438 0 W/39238438-39238438 FN-114 Single Base Substitution T-C INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1414-S.SNP.1:39238795 chr01:039238795 0 W/39238795-39238795 FN1414-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN-273.SNP.1:39244488 chr01:039244488 0 W/39244488-39244488 FN-273 Single Base Substitution C-G START_GAINED HET LOC_Os01g67520 VTC2, putative, expressed SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3286-S.SNP.1:39248894 chr01:039248894 0 W/39248894-39248894 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.961442;DP=2991;DP4=1448,1419,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.29402e-05;MQSB=0.828931;RPB=0.942432;SGB=35.1773;VDB=0.11447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.1:39249808 chr01:039249808 0 W/39249808-39249808 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.816032;DP=2693;DP4=1534,1034,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.42737e-06;MQSB=0.984699;RPB=0.960947;SGB=35.7479;VDB=0.892252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.1:39261649 chr01:039261649 0 W/39261649-39261649 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.858256;DP=3088;DP4=1587,1405,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02002e-07;MQSB=0.999815;RPB=0.994601;SGB=62.3078;VDB=0.187778;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.1:39262332 chr01:039262332 0 W/39262332-39262332 FN244-S Single Base Substitution G-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2273-S.SNP.1:39266507 chr01:039266507 0 W/39266507-39266507 FN2273-S SNP T -> A AC=2;AN=190;BQB=0.594732;DP=4849;DP4=2183,2177,22,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.63721e-25;MQSB=0.784084;RPB=0.612836;SGB=146.271;VDB=0.457444;EFF=UTR_3_PRIME(MODIFIER||120||729|LOC_Os01g67550|protein_coding|CODING|LOC_Os01g67550.1|11|1) FN909-S.SNP.1:39278443 chr01:039278443 0 W/39278443-39278443 FN909-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g67580 multidrug resistance-associated protein, putative, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2349.SNP.1:39287328 chr01:039287328 0 W/39287328-39287328 FN2349 SNP T -> C AC=1;AN=192;BQB=0.722864;DP=5505;DP4=2624,2677,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.11194e-16;MQSB=0.878238;RPB=0.900968;SGB=117.676;VDB=0.347228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.1:39293393 chr01:039293393 0 W/39293393-39293393 FN1696-S SNP G -> T AC=2;AN=188;BQB=0.414628;DP=4002;DP4=2006,1926,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.26023e-14;MQSB=0.690859;RPB=0.901224;SGB=-42.3883;VDB=0.825746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D389Y|695|LOC_Os01g67590|protein_coding|CODING|LOC_Os01g67590.1|10|1) FN-175.SNP.1:39296421 chr01:039296421 0 W/39296421-39296421 FN-175 Single Base Substitution T-A UTR_3_PRIME HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2467.SNP.1:39296789 chr01:039296789 0 W/39296789-39296789 FN2467 SNP C -> T AC=1;AN=200;BQB=0.943323;DP=4791;DP4=2222,2315,10,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67505e-16;MQSB=0.818913;RPB=0.674758;SGB=25.5416;VDB=0.72211;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.1:39300299 chr01:039300299 0 W/39300299-39300299 FN762-S Single Base Substitution G-T INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN4011-S.SNP.1:39302254 chr01:039302254 0 W/39302254-39302254 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.912883;DP=3238;DP4=2003,1105,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05828e-10;MQSB=0.779248;RPB=0.840706;SGB=69.8961;VDB=0.252353;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W77*|108|LOC_Os01g67610|protein_coding|CODING|LOC_Os01g67610.1|2|1) FN-139.SNP.1:39305455 chr01:039305455 0 W/39305455-39305455 FN-139 Single Base Substitution C-G INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2377.SNP.1:39305504 chr01:039305504 0 W/39305504-39305504 FN2377 SNP A -> C AC=1;AN=192;BQB=0.677314;DP=5584;DP4=2836,2300,18,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.70027e-14;MQSB=0.929625;RPB=0.969216;SGB=-9.68954;VDB=0.321699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.1:39306162 chr01:039306162 0 W/39306162-39306162 FN1106-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g67620 expressed protein SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3798-S.SNP.1:39308603 chr01:039308603 0 W/39308603-39308603 FN3798-S SNP T -> A AC=1;AN=190;BQB=0.984515;DP=2853;DP4=1120,1497,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29045e-07;MQSB=0.723902;RPB=0.995378;SGB=23.6597;VDB=0.653244;EFF=INTRON(MODIFIER||||557|LOC_Os01g67630|protein_coding|CODING|LOC_Os01g67630.1|3|1),INTRON(MODIFIER||||519|LOC_Os01g67630|protein_coding|CODING|LOC_Os01g67630.2|3|1) FN2627-S.SNP.1:39311747 chr01:039311747 0 W/39311747-39311747 FN2627-S SNP C -> T AC=1;AN=200;BQB=0.319712;DP=4994;DP4=2497,2244,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28291e-05;MQSB=0.99157;RPB=0.546718;SGB=31.2392;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.1:39328985 chr01:039328985 0 W/39328985-39328985 FN3998-S SNP C -> T AC=1;AN=168;BQB=0.783126;DP=3524;DP4=1821,1550,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44854e-09;MQSB=0.928168;RPB=0.344773;SGB=-58.653;VDB=0.30411;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A211|270|LOC_Os01g67680|protein_coding|CODING|LOC_Os01g67680.1|1|1) FN2705-S.SNP.1:39330946 chr01:039330946 0 W/39330946-39330946 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.0788171;DP=4944;DP4=2290,2350,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.78978e-12;MQSB=0.999804;RPB=0.969413;SGB=47.7211;VDB=0.250346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.1:39331322 chr01:039331322 0 W/39331322-39331322 FN1380-S Single Base Substitution T-A INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2628-S.SNP.1:39337924 chr01:039337924 0 W/39337924-39337924 FN2628-S SNP A -> C AC=2;AN=200;BQB=0.996417;DP=4841;DP4=2380,2230,20,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.95545e-22;MQSB=0.962616;RPB=0.644044;SGB=126.794;VDB=0.220425;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taG|Y1078*|1448|LOC_Os01g67690|protein_coding|CODING|LOC_Os01g67690.1|1|1) FN3991-S.SNP.1:39338374 chr01:039338374 0 W/39338374-39338374 FN3991-S SNP A -> G AC=2;AN=168;BQB=0.753732;DP=2649;DP4=1481,997,9,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.50693e-07;MQSB=0.974258;RPB=0.979872;SGB=41.6096;VDB=0.969269;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T928|1448|LOC_Os01g67690|protein_coding|CODING|LOC_Os01g67690.1|1|1) FN429-S.SNP.1:39340831 chr01:039340831 0 W/39340831-39340831 FN429-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1618-S.SNP.1:39341571 chr01:039341571 0 W/39341571-39341571 FN1618-S Single Base Substitution G-A INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3280-S.SNP.1:39343403 chr01:039343403 0 W/39343403-39343403 FN3280-S SNP C -> A AC=1;AN=184;BQB=0.458188;DP=2885;DP4=1370,1320,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50662e-11;MQSB=0.999114;RPB=0.168425;SGB=-12.1051;VDB=0.582986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.1:39352093 chr01:039352093 0 W/39352093-39352093 FN3613-S SNP G -> T AC=1;AN=190;BQB=0.97125;DP=3014;DP4=1521,1394,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.61401e-10;MQSB=0.99763;RPB=0.201154;SGB=33.8752;VDB=0.388401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.1:39359448 chr01:039359448 0 W/39359448-39359448 FN3653-S SNP C -> G AC=1;AN=190;BQB=0.94218;DP=3147;DP4=1649,1400,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.08391e-06;MQSB=0.971877;RPB=0.901713;SGB=28.9929;VDB=0.227606;EFF=UTR_3_PRIME(MODIFIER||339||287|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.4|7|1),INTRON(MODIFIER||||487|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.1|7|1),INTRON(MODIFIER||||339|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.2|7|1),INTRON(MODIFIER||||330|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.3|7|1) FN3909-S.SNP.1:39361196 chr01:039361196 0 W/39361196-39361196 FN3909-S SNP G -> T AC=1;AN=158;BQB=0.974214;DP=2599;DP4=1297,1214,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.73073e-09;MQSB=0.997478;RPB=0.976056;SGB=64.5449;VDB=0.897668;EFF=INTRON(MODIFIER||||487|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.1|5|1),INTRON(MODIFIER||||339|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.2|5|1),INTRON(MODIFIER||||330|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.3|5|1),INTRON(MODIFIER||||287|LOC_Os01g67720|protein_coding|CODING|LOC_Os01g67720.4|5|1) FN1140-S.SNP.1:39364699 chr01:039364699 0 W/39364699-39364699 FN1140-S Single Base Substitution A-T INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1550-S.SNP.1:39371894 chr01:039371894 0 W/39371894-39371894 FN1550-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os01g67740 chromosome segregation protein, putative, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2191-S.SNP.1:39380044 chr01:039380044 0 W/39380044-39380044 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.96012;DP=4504;DP4=1984,2280,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76006e-08;MQSB=0.98985;RPB=0.998634;SGB=46.7622;VDB=0.65825;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.1:39380384 chr01:039380384 0 W/39380384-39380384 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN554-S.SNP.1:39380628 chr01:039380628 0 W/39380628-39380628 FN554-S Single Base Substitution C-T INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2582-S.SNP.1:39381350 chr01:039381350 0 W/39381350-39381350 FN2582-S SNP C -> A AC=1;AN=198;BQB=0.999958;DP=4501;DP4=2168,2099,3,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000444346;MQB=1.80667e-09;MQSB=0.0514189;RPB=0.986703;SGB=31.9395;VDB=0.708022;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.1:39386634 chr01:039386634 0 W/39386634-39386634 FN594-S Single Base Substitution A-T INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3902-S.SNP.1:39389213 chr01:039389213 0 W/39389213-39389213 FN3902-S SNP T -> C AC=1;AN=158;BQB=0.999196;DP=2594;DP4=1204,1297,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22645e-09;MQSB=0.993648;RPB=0.949615;SGB=40.8124;VDB=0.0625906;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N227D|582|LOC_Os01g67770|protein_coding|CODING|LOC_Os01g67770.1|4|1) FN3978-S.SNP.1:39389886 chr01:039389886 0 W/39389886-39389886 FN3978-S SNP G -> A AC=1;AN=168;BQB=0.956623;DP=2650;DP4=1375,1204,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.08503e-08;MQSB=0.892609;RPB=0.975984;SGB=38.1788;VDB=0.166048;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F71|582|LOC_Os01g67770|protein_coding|CODING|LOC_Os01g67770.1|2|1) FN3370-S.SNP.1:39400565 chr01:039400565 0 W/39400565-39400565 FN3370-S SNP C -> A AC=1;AN=184;BQB=0.721926;DP=3443;DP4=1889,1446,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51694e-07;MQSB=0.912484;RPB=0.544363;SGB=71.3514;VDB=0.277979;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.1:39401050 chr01:039401050 0 W/39401050-39401050 FN451-S Single Base Substitution G-T INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3531-S.SNP.1:39401242 chr01:039401242 0 W/39401242-39401242 FN3531-S SNP G -> A AC=2;AN=188;BQB=0.976456;DP=3750;DP4=2247,1347,23,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.06574e-18;MQSB=0.968187;RPB=0.0341403;SGB=71.8555;VDB=0.29424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G21E|160|LOC_Os01g67790|protein_coding|CODING|LOC_Os01g67790.1|1|1) FN2347.SNP.1:39401979 chr01:039401979 0 W/39401979-39401979 FN2347 SNP A -> T AC=2;AN=192;BQB=0.250937;DP=5043;DP4=2135,2635,23,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.03569e-29;MQSB=0.800749;RPB=0.24344;SGB=210.869;VDB=0.102313;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.1:39401979 chr01:039401979 0 W/39401979-39401979 FN4135-S SNP A -> T AC=1;AN=182;BQB=0.936946;DP=3487;DP4=1583,1830,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.27438e-10;MQSB=0.894871;RPB=0.989172;SGB=71.1765;VDB=0.709092;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.1:39401979 chr01:039401979 0 W/39401979-39401979 FN629-S Single Base Substitution A-T INTERGENIC HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1097-S.SNP.1:39401986 chr01:039401986 0 W/39401986-39401986 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2388.SNP.1:39403082 chr01:039403082 0 W/39403082-39403082 FN2388 SNP C -> T AC=1;AN=200;BQB=0.90453;DP=4581;DP4=2142,2177,7,9;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.127701;MQB=0.165365;MQSB=4.51776e-29;RPB=0.0926748;SGB=26.8797;VDB=0.211336;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.1:39414631 chr01:039414631 0 W/39414631-39414631 FN424-S Single Base Substitution A-C INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN4137-S.SNP.1:39415193 chr01:039415193 0 W/39415193-39415193 FN4137-S SNP C -> T AC=1;AN=170;BQB=0.782284;DP=2632;DP4=1041,1505,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.91209e-07;MQSB=0.938456;RPB=0.89946;SGB=22.3266;VDB=0.766108;EFF=INTRON(MODIFIER||||673|LOC_Os01g67830|protein_coding|CODING|LOC_Os01g67830.1|4|1) FN2435.SNP.1:39419376 chr01:039419376 0 W/39419376-39419376 FN2435 SNP G -> A AC=1;AN=200;BQB=0.440764;DP=3510;DP4=1428,1838,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06922e-11;MQSB=0.0906316;RPB=0.885118;SGB=100.316;VDB=0.243832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.1:39427013 chr01:039427013 0 W/39427013-39427013 FN2251-S SNP A -> T AC=1;AN=190;BQB=0.999624;DP=5140;DP4=2184,2516,11,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.58912e-16;MQSB=0.928272;RPB=0.912707;SGB=24.3115;VDB=0.186802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.1:39437009 chr01:039437009 0 W/39437009-39437009 FN2435 SNP G -> A AC=1;AN=200;BQB=0.983726;DP=4704;DP4=2173,2178,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41597e-18;MQSB=0.961304;RPB=0.954985;SGB=94.3471;VDB=0.286129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.1:39437010 chr01:039437010 0 W/39437010-39437010 FN2435 SNP C -> T AC=1;AN=200;BQB=0.938405;DP=4697;DP4=2180,2168,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60372e-18;MQSB=0.891817;RPB=0.996997;SGB=127.947;VDB=0.321383;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.1:39438429 chr01:039438429 0 W/39438429-39438429 FN-362 Single Base Substitution G-T INTRON HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN-362.SNP.1:39438432 chr01:039438432 0 W/39438432-39438432 FN-362 Single Base Substitution G-T INTRON HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2560-S.SNP.1:39443010 chr01:039443010 0 W/39443010-39443010 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.557298;DP=3851;DP4=1791,1793,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000732712;MQSB=0.973108;RPB=0.169199;SGB=22.1736;VDB=0.565813;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.1:39443450 chr01:039443450 0 W/39443450-39443450 FN-411 Single Base Substitution A-G INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN411-S.SNP.1:39443450 chr01:039443450 0 W/39443450-39443450 FN411-S Single Base Substitution A-G INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3925-S.SNP.1:39443751 chr01:039443751 0 W/39443751-39443751 FN3925-S SNP C -> G AC=1;AN=158;BQB=0.734107;DP=2410;DP4=1136,1180,14,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.78692e-09;MQSB=0.979324;RPB=0.716789;SGB=82.0227;VDB=0.495036;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.1:39449521 chr01:039449521 0 W/39449521-39449521 FN757-S Single Base Substitution T-G INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN718-S.SNP.1:39465053 chr01:039465053 0 W/39465053-39465053 FN718-S Single Base Substitution A-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN3375-S.SNP.1:39479532 chr01:039479532 0 W/39479532-39479532 FN3375-S SNP C -> T AC=1;AN=184;BQB=0.995211;DP=3157;DP4=1780,1282,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00158378;MQB=0.00038441;MQSB=0.0366874;RPB=0.667236;SGB=35.7479;VDB=0.701818;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.1:39486515 chr01:039486515 0 W/39486515-39486515 FN553-S Single Base Substitution T-C INTERGENIC HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN_N2-29a-1.SNP.1:39488042 chr01:039488042 0 W/39488042-39488042 FN_N2-29a-1 Single Base Substitution T-C HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3477-S.SNP.1:39492334 chr01:039492334 0 W/39492334-39492334 FN3477-S SNP G -> C AC=1;AN=184;BQB=0.869031;DP=2613;DP4=1135,1266,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60797e-08;MQSB=0.622389;RPB=0.999888;SGB=0.715177;VDB=0.919142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.1:39495632 chr01:039495632 0 W/39495632-39495632 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.695261;DP=4725;DP4=2284,2146,17,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30302e-17;MQSB=0.105495;RPB=0.739201;SGB=144.727;VDB=0.207032;EFF=INTRON(MODIFIER||||1286|LOC_Os01g67970|protein_coding|CODING|LOC_Os01g67970.1|4|1) FN1062-S.SNP.1:39495897 chr01:039495897 0 W/39495897-39495897 FN1062-S Single Base Substitution G-A INTRON HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3770-S.SNP.1:39497666 chr01:039497666 0 W/39497666-39497666 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.969728;DP=2607;DP4=1181,1347,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.46044e-05;MQSB=0.956687;RPB=0.982394;SGB=26.3271;VDB=0.984172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R686C|1286|LOC_Os01g67970|protein_coding|CODING|LOC_Os01g67970.1|6|1) FN-46.SNP.1:39498708 chr01:039498708 0 W/39498708-39498708 FN-46 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os01g67970 ZOS1-20 - C2H2 zinc finger protein, expressed SNo: 46, Mutant_ID: FN-46, Generation: M2, Mutations: 16, Genes: 6, Seed availability: Yes. FN3651-S.SNP.1:39500698 chr01:039500698 0 W/39500698-39500698 FN3651-S SNP G -> A AC=1;AN=190;BQB=0.767611;DP=3085;DP4=1302,1633,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07637e-06;MQSB=0.998016;RPB=0.513404;SGB=21.1058;VDB=0.41004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.1:39528244 chr01:039528244 0 W/39528244-39528244 FN2080-S SNP A -> C AC=1;AN=168;BQB=0.945479;DP=3993;DP4=2064,1884,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.22861e-10;MQSB=0.986514;RPB=0.0970081;SGB=-69.6373;VDB=0.197286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.1:39531542 chr01:039531542 0 W/39531542-39531542 FN2453 SNP G -> A AC=1;AN=200;BQB=0.107695;DP=4214;DP4=1850,2046,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.46433e-12;MQSB=0.822634;RPB=0.0444857;SGB=-10.0844;VDB=0.377174;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.1:39535497 chr01:039535497 0 W/39535497-39535497 FN-362 Single Base Substitution C-T INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2591-S.SNP.1:39536345 chr01:039536345 0 W/39536345-39536345 FN2591-S SNP T -> C AC=1;AN=198;BQB=0.993827;DP=4523;DP4=2009,2199,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65648e-05;MQSB=0.344081;RPB=0.0842514;SGB=29.3637;VDB=0.0795328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.1:39536349 chr01:039536349 0 W/39536349-39536349 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.454025;DP=4494;DP4=2053,2184,15,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.35224e-17;MQSB=0.394878;RPB=0.707776;SGB=41.2518;VDB=0.134289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.1:39536780 chr01:039536780 0 W/39536780-39536780 FN1314-S Single Base Substitution A-G INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-362.SNP.1:39537107 chr01:039537107 0 W/39537107-39537107 FN-362 Single Base Substitution A-T INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1478-S.SNP.1:39539917 chr01:039539917 0 W/39539917-39539917 FN1478-S Single Base Substitution C-T INTRON Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3807-S.SNP.1:39550366 chr01:039550366 0 W/39550366-39550366 FN3807-S SNP T -> A AC=1;AN=190;BQB=0.959195;DP=3017;DP4=1527,1387,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.90897e-10;MQSB=0.99602;RPB=0.689512;SGB=23.6597;VDB=0.112046;EFF=INTRON(MODIFIER||||61|LOC_Os01g68030|protein_coding|CODING|LOC_Os01g68030.1|1|1) FN3563-S.SNP.1:39550367 chr01:039550367 0 W/39550367-39550367 FN3563-S SNP A -> T AC=1;AN=188;BQB=0.992023;DP=2933;DP4=1521,1315,15,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.07947e-12;MQSB=0.874249;RPB=0.179985;SGB=98.9552;VDB=0.172848;EFF=INTRON(MODIFIER||||61|LOC_Os01g68030|protein_coding|CODING|LOC_Os01g68030.1|1|1) FN4155-S.SNP.1:39552567 chr01:039552567 0 W/39552567-39552567 FN4155-S SNP A -> C AC=1;AN=170;BQB=0.870055;DP=2434;DP4=1260,1102,13,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31659e-09;MQSB=0.939046;RPB=0.37696;SGB=70.0854;VDB=0.30411;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L338R|444|LOC_Os01g68040|protein_coding|CODING|LOC_Os01g68040.1|5|1) FN3696-S.SNP.1:39554923 chr01:039554923 0 W/39554923-39554923 FN3696-S SNP C -> A AC=1;AN=190;BQB=0.700386;DP=1841;DP4=855,902,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58151e-07;MQSB=0.953212;RPB=0.845822;SGB=53.6492;VDB=0.346573;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L74|444|LOC_Os01g68040|protein_coding|CODING|LOC_Os01g68040.1|1|1) FN3696-S.SNP.1:39554925 chr01:039554925 0 W/39554925-39554925 FN3696-S SNP G -> T AC=1;AN=190;BQB=0.999195;DP=1847;DP4=863,914,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33409e-07;MQSB=0.972608;RPB=0.963195;SGB=28.9929;VDB=0.183236;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L74M|444|LOC_Os01g68040|protein_coding|CODING|LOC_Os01g68040.1|1|1) FN1674-S.SNP.1:39559333 chr01:039559333 0 W/39559333-39559333 FN1674-S SNP C -> T AC=1;AN=188;BQB=0.276308;DP=3232;DP4=1820,1364,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.85088e-06;MQSB=0.886657;RPB=0.999457;SGB=-16.6296;VDB=0.445805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.1:39564825 chr01:039564825 0 W/39564825-39564825 FN3715-S SNP A -> T AC=1;AN=190;BQB=0.28984;DP=3509;DP4=1836,1487,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06948e-07;MQSB=0.871933;RPB=0.312797;SGB=2.55724;VDB=0.313899;EFF=UTR_3_PRIME(MODIFIER||225||354|LOC_Os01g68050|protein_coding|CODING|LOC_Os01g68050.2|5|1),INTRON(MODIFIER||||447|LOC_Os01g68050|protein_coding|CODING|LOC_Os01g68050.1|5|1) FN585-S.SNP.1:39566587 chr01:039566587 0 W/39566587-39566587 FN585-S Single Base Substitution A-T INTRON HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN585-S.SNP.1:39566588 chr01:039566588 0 W/39566588-39566588 FN585-S Single Base Substitution C-T INTRON HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN565-S.SNP.1:39566970 chr01:039566970 0 W/39566970-39566970 FN565-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g68060 copine, putative, expressed SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2607-S.SNP.1:39576380 chr01:039576380 0 W/39576380-39576380 FN2607-S SNP C -> A AC=1;AN=198;BQB=0.425058;DP=4531;DP4=2156,2125,8,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.27666e-12;MQSB=0.906756;RPB=0.949587;SGB=76.1002;VDB=0.337235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.1:39605689 chr01:039605689 0 W/39605689-39605689 FN1644-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os01g68120 DCL3, putative, expressed SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3552-S.SNP.1:39616305 chr01:039616305 0 W/39616305-39616305 FN3552-S SNP G -> T AC=2;AN=188;BQB=0.946777;DP=2828;DP4=1426,1303,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72652e-17;MQSB=0.998376;RPB=0.877759;SGB=121.672;VDB=0.0278078;EFF=UTR_3_PRIME(MODIFIER||188||320|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.1|10|1),UTR_3_PRIME(MODIFIER||226||314|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.2|10|1),UTR_3_PRIME(MODIFIER||4277||236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.3|9|1),UTR_3_PRIME(MODIFIER||4277||236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.4|10|1) FN2671-S.SNP.1:39620874 chr01:039620874 0 W/39620874-39620874 FN2671-S SNP G -> T AC=2;AN=200;BQB=0.917108;DP=5034;DP4=2351,2405,16,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21694e-16;MQSB=0.994497;RPB=0.94469;SGB=97.9523;VDB=0.923865;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y163*|320|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.1|6|1),STOP_GAINED(HIGH|NONSENSE|taC/taA|Y163*|314|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.2|6|1),STOP_GAINED(HIGH|NONSENSE|taC/taA|Y172*|236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.3|6|1),STOP_GAINED(HIGH|NONSENSE|taC/taA|Y172*|236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.4|6|1),STOP_GAINED(HIGH|NONSENSE|taC/taA|Y163*|227|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.5|6|1);LOF=(LOC_Os01g68160|LOC_Os01g68160|5|0.40);NMD=(LOC_Os01g68160|LOC_Os01g68160|5|0.40) FN1060-S.SNP.1:39624507 chr01:039624507 0 W/39624507-39624507 FN1060-S Single Base Substitution C-T INTRON HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2330.SNP.1:39630568 chr01:039630568 0 W/39630568-39630568 FN2330 SNP A -> T AC=1;AN=192;BQB=0.847471;DP=4573;DP4=2092,2252,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.80284e-13;MQSB=0.994717;RPB=0.988714;SGB=64.7304;VDB=0.206138;EFF=INTRON(MODIFIER||||320|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.1|1|1),INTRON(MODIFIER||||314|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.2|1|1),INTRON(MODIFIER||||236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.3|1|1),INTRON(MODIFIER||||236|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.4|1|1),INTRON(MODIFIER||||227|LOC_Os01g68160|protein_coding|CODING|LOC_Os01g68160.5|1|1) FN867-S.SNP.1:39636164 chr01:039636164 0 W/39636164-39636164 FN867-S Single Base Substitution T-C INTERGENIC HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN3342-S.SNP.1:39645418 chr01:039645418 0 W/39645418-39645418 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.469572;DP=3005;DP4=1617,1290,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79534e-10;MQSB=0.895122;RPB=0.583864;SGB=-14.1922;VDB=0.147571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.1:39645830 chr01:039645830 0 W/39645830-39645830 FN1280-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1561-S.SNP.1:39667120 chr01:039667120 0 W/39667120-39667120 FN1561-S Single Base Substitution G-A INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-46.SNP.1:39667488 chr01:039667488 0 W/39667488-39667488 FN-46 Single Base Substitution T-C INTRON Homo SNo: 46, Mutant_ID: FN-46, Generation: M2, Mutations: 16, Genes: 6, Seed availability: Yes. FN1121-S.SNP.1:39670033 chr01:039670033 0 W/39670033-39670033 FN1121-S Single Base Substitution A-G INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3347-S.SNP.1:39679823 chr01:039679823 0 W/39679823-39679823 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.85868;DP=3225;DP4=1730,1383,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.07348e-08;MQSB=0.749392;RPB=0.865604;SGB=32.2261;VDB=0.298917;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G86D|102|LOC_Os01g68290|protein_coding|CODING|LOC_Os01g68290.1|1|1) FN-79.SNP.1:39691931 chr01:039691931 0 W/39691931-39691931 FN-79 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g68320 DEAD-box ATP-dependent RNA helicase 30, putative, expressed SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3926-S.SNP.1:39714487 chr01:039714487 0 W/39714487-39714487 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.997247;DP=2854;DP4=1391,1363,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.00700771;MQB=0.0147185;MQSB=0.921184;RPB=0.463398;SGB=37.4429;VDB=0.954778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V728I|979|LOC_Os01g68350|protein_coding|CODING|LOC_Os01g68350.1|5|1) FN3508-S.SNP.1:39716327 chr01:039716327 0 W/39716327-39716327 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.0262837;DP=3356;DP4=1513,1790,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57053e-05;MQSB=0.994042;RPB=0.988445;SGB=28.6195;VDB=0.823797;EFF=INTRON(MODIFIER||||979|LOC_Os01g68350|protein_coding|CODING|LOC_Os01g68350.1|2|1) FN3937-S.SNP.1:39716535 chr01:039716535 0 W/39716535-39716535 FN3937-S SNP T -> A AC=2;AN=158;BQB=0.536129;DP=2751;DP4=1199,1215,17,11;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000727008;MQB=5.92401e-09;MQSB=0.996096;RPB=0.22607;SGB=-12.4741;VDB=0.115125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H312L|979|LOC_Os01g68350|protein_coding|CODING|LOC_Os01g68350.1|2|1) FN-59.SNP.1:39728929 chr01:039728929 0 W/39728929-39728929 FN-59 Single Base Substitution G-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN-59.SNP.1:39728930 chr01:039728930 0 W/39728930-39728930 FN-59 Single Base Substitution A-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3838-S.SNP.1:39730126 chr01:039730126 0 W/39730126-39730126 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.952497;DP=2823;DP4=1376,1347,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53593e-07;MQSB=0.997734;RPB=0.959604;SGB=36.1006;VDB=0.793759;EFF=UTR_5_PRIME(MODIFIER||211||760|LOC_Os01g68380|protein_coding|CODING|LOC_Os01g68380.1|1|1),UTR_5_PRIME(MODIFIER||211||723|LOC_Os01g68380|protein_coding|CODING|LOC_Os01g68380.2|1|1) FN1151-S.SNP.1:39732483 chr01:039732483 0 W/39732483-39732483 FN1151-S Single Base Substitution G-A INTRON HOMO SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1104-S.SNP.1:39743119 chr01:039743119 0 W/39743119-39743119 FN1104-S Single Base Substitution G-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1413-S.SNP.1:39743649 chr01:039743649 0 W/39743649-39743649 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3681-S.SNP.1:39756700 chr01:039756700 0 W/39756700-39756700 FN3681-S SNP T -> A AC=1;AN=190;BQB=0.996353;DP=2176;DP4=751,1321,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.67199e-07;MQSB=0.949541;RPB=0.923681;SGB=39.6545;VDB=0.712113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V1497D|1542|LOC_Os01g68410|protein_coding|CODING|LOC_Os01g68410.1|4|1) FN1221-S.SNP.1:39758295 chr01:039758295 0 W/39758295-39758295 FN1221-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3792-S.SNP.1:39759385 chr01:039759385 0 W/39759385-39759385 FN3792-S SNP C -> T AC=2;AN=190;BQB=0.598953;DP=2972;DP4=1640,1217,12,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.22794e-12;MQSB=0.798071;RPB=0.998987;SGB=27.4193;VDB=0.203682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.1:39761870 chr01:039761870 0 W/39761870-39761870 FN2296 SNP G -> A AC=2;AN=192;BQB=0.376464;DP=5044;DP4=2330,2430,33,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.97644e-32;MQSB=0.860588;RPB=0.196733;SGB=200.176;VDB=0.44434;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.1:39765489 chr01:039765489 0 W/39765489-39765489 FN525-S Single Base Substitution C-T INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4011-S.SNP.1:39767475 chr01:039767475 0 W/39767475-39767475 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.882293;DP=3089;DP4=1413,1549,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.241178;MQB=0.746632;MQSB=0.5889;RPB=0.378458;SGB=-112.21;VDB=0.382591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R386Q|1187|LOC_Os01g68430|protein_coding|CODING|LOC_Os01g68430.1|1|1) FN1334-S.SNP.1:39771447 chr01:039771447 0 W/39771447-39771447 FN1334-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3599-S.SNP.1:39776964 chr01:039776964 0 W/39776964-39776964 FN3599-S SNP C -> G AC=1;AN=188;BQB=0.954497;DP=2367;DP4=1064,1231,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.95714e-08;MQSB=0.910099;RPB=0.970796;SGB=39.5276;VDB=0.431328;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.1:39794482 chr01:039794482 0 W/39794482-39794482 FN_552-1-1 Single Base Substitution G-C HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN2325.SNP.1:39795436 chr01:039795436 0 W/39795436-39795436 FN2325 SNP A -> C AC=1;AN=192;BQB=0.910149;DP=5093;DP4=2633,2092,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.42975e-15;MQSB=0.914607;RPB=0.117477;SGB=78.9878;VDB=0.390802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D162A|187|LOC_Os01g68480|protein_coding|CODING|LOC_Os01g68480.1|3|1),UTR_3_PRIME(MODIFIER||1438||533|LOC_Os01g68490|protein_coding|CODING|LOC_Os01g68490.1|3|1) FN2264-S.SNP.1:39799068 chr01:039799068 0 W/39799068-39799068 FN2264-S SNP C -> A AC=1;AN=190;BQB=0.232615;DP=5013;DP4=2344,2359,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.64472e-07;MQSB=0.719265;RPB=0.913203;SGB=8.77275;VDB=0.924901;EFF=START_GAINED(LOW||||533|LOC_Os01g68490|protein_coding|CODING|LOC_Os01g68490.1|1|1),UTR_5_PRIME(MODIFIER||593||533|LOC_Os01g68490|protein_coding|CODING|LOC_Os01g68490.1|1|1) FN852-S.SNP.1:39809283 chr01:039809283 0 W/39809283-39809283 FN852-S Single Base Substitution C-A INTERGENIC HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN859-S.SNP.1:39813333 chr01:039813333 0 W/39813333-39813333 FN859-S Single Base Substitution A-T INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3834-S.SNP.1:39813437 chr01:039813437 0 W/39813437-39813437 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.968878;DP=2693;DP4=1234,1368,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11432e-05;MQSB=0.997292;RPB=0.997183;SGB=26.3271;VDB=0.223909;EFF=INTRON(MODIFIER||||712|LOC_Os01g68524|protein_coding|CODING|LOC_Os01g68524.1|5|1),INTRON(MODIFIER||||151|LOC_Os01g68524|protein_coding|CODING|LOC_Os01g68524.2|4|1),INTRON(MODIFIER||||600|LOC_Os01g68510|protein_coding|CODING|LOC_Os01g68510.1|3|1) FN929-S.SNP.1:39814577 chr01:039814577 0 W/39814577-39814577 FN929-S Single Base Substitution C-A INTRON HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN1071-S.SNP.1:39820181 chr01:039820181 0 W/39820181-39820181 FN1071-S Single Base Substitution G-A INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1042-S.SNP.1:39822307 chr01:039822307 0 W/39822307-39822307 FN1042-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN770-S.SNP.1:39823700 chr01:039823700 0 W/39823700-39823700 FN770-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1375-S.SNP.1:39828384 chr01:039828384 0 W/39828384-39828384 FN1375-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. W466-5-1.SNP.1:39831717 chr01:039831717 0 W/39831717-39831717 W466-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2790-S.SNP.1:39833413 chr01:039833413 0 W/39833413-39833413 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.941888;DP=4271;DP4=1803,2166,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.39902e-14;MQSB=0.994894;RPB=0.407725;SGB=-6.09922;VDB=0.585714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.1:39835803 chr01:039835803 0 W/39835803-39835803 FN3501-S SNP A -> G AC=1;AN=188;BQB=0.984764;DP=2701;DP4=1497,1145,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35973e-06;MQSB=0.0989881;RPB=0.126665;SGB=25.3545;VDB=0.332599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.1:39843311 chr01:039843311 0 W/39843311-39843311 FN3823-S SNP G -> T AC=2;AN=190;BQB=0.99973;DP=2447;DP4=1106,1243,13,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5858e-13;MQSB=0.991644;RPB=0.830539;SGB=90.0802;VDB=0.260151;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.1:39843311 chr01:039843311 0 W/39843311-39843311 FN_807-3-1 Single Base Substitution G-T Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2705-S.SNP.1:39844055 chr01:039844055 0 W/39844055-39844055 FN2705-S SNP A -> T AC=1;AN=200;BQB=0.00731218;DP=4838;DP4=2365,2084,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.63527e-14;MQSB=0.944885;RPB=0.616046;SGB=19.1209;VDB=0.106137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.1:39844200 chr01:039844200 0 W/39844200-39844200 FN2705-S SNP G -> T AC=1;AN=200;BQB=0.973253;DP=4924;DP4=2395,2280,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91543e-14;MQSB=0.837882;RPB=0.858686;SGB=52.9314;VDB=0.145532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.1:39845783 chr01:039845783 0 W/39845783-39845783 FN1734-S SNP C -> G AC=1;AN=188;BQB=0.353857;DP=3876;DP4=1913,1933,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8805e-06;MQSB=0.992335;RPB=0.307323;SGB=-35.5377;VDB=0.0273861;EFF=INTRON(MODIFIER||||123|LOC_Os01g68598|protein_coding|CODING|LOC_Os01g68598.1|2|1),INTRON(MODIFIER||||121|LOC_Os01g68598|protein_coding|CODING|LOC_Os01g68598.2|2|1) FN3610-S.SNP.1:39855407 chr01:039855407 0 W/39855407-39855407 FN3610-S SNP T -> C AC=2;AN=190;BQB=0.994046;DP=2981;DP4=1498,1346,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10138e-16;MQSB=0.97;RPB=0.682606;SGB=103.624;VDB=0.182137;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G472|523|LOC_Os01g68620|protein_coding|CODING|LOC_Os01g68620.1|11|1) FN860-S.SNP.1:39856462 chr01:039856462 0 W/39856462-39856462 FN860-S Single Base Substitution C-G INTERGENIC HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN526-S.SNP.1:39860597 chr01:039860597 0 W/39860597-39860597 FN526-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g68630 leaf senescence related protein, putative, expressed SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN526-S.SNP.1:39860600 chr01:039860600 0 W/39860600-39860600 FN526-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os01g68630 leaf senescence related protein, putative, expressed SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1438-S.SNP.1:39862620 chr01:039862620 0 W/39862620-39862620 FN1438-S Single Base Substitution C-T INTRON HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3362-S.SNP.1:39865526 chr01:039865526 0 W/39865526-39865526 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.999782;DP=3324;DP4=1775,1440,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.76932e-07;MQSB=0.969389;RPB=0.535599;SGB=35.7479;VDB=0.348694;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.1:39871259 chr01:039871259 0 W/39871259-39871259 FN549-S Single Base Substitution T-G INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN661-S.SNP.1:39881940 chr01:039881940 0 W/39881940-39881940 FN661-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN661-S.SNP.1:39890875 chr01:039890875 0 W/39890875-39890875 FN661-S Single Base Substitution A-G INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN791-S.SNP.1:39892799 chr01:039892799 0 W/39892799-39892799 FN791-S Single Base Substitution G-A INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3723-S.SNP.1:39903016 chr01:039903016 0 W/39903016-39903016 FN3723-S SNP A -> G AC=1;AN=190;BQB=0.426714;DP=2641;DP4=1290,1223,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.0095134;MQSB=0.999425;RPB=0.100768;SGB=10.8904;VDB=0.587338;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.1:39903177 chr01:039903177 0 W/39903177-39903177 FN755-S Single Base Substitution A-C INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2139-S.SNP.1:39905634 chr01:039905634 0 W/39905634-39905634 FN2139-S SNP A -> C AC=1;AN=168;BQB=0.0041386;DP=3742;DP4=1785,1907,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15794e-08;MQSB=0.917084;RPB=0.991483;SGB=-151.471;VDB=0.939646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.1:39905634 chr01:039905634 0 W/39905634-39905634 FN2542-S SNP A -> C AC=1;AN=198;BQB=0.961864;DP=4444;DP4=2232,2026,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.74817e-13;MQSB=0.994653;RPB=0.408107;SGB=44.9151;VDB=0.609251;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.1:39918015 chr01:039918015 0 W/39918015-39918015 FN1079-S Single Base Substitution G-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1467-S.SNP.1:39921292 chr01:039921292 0 W/39921292-39921292 FN1467-S Single Base Substitution T-C INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2392.SNP.1:39921475 chr01:039921475 0 W/39921475-39921475 FN2392 SNP T -> C AC=1;AN=200;BQB=0.996848;DP=5366;DP4=2697,2338,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000186359;MQB=7.7215e-13;MQSB=0.998186;RPB=0.535366;SGB=52.9314;VDB=0.167168;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.1:39924644 chr01:039924644 0 W/39924644-39924644 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN981-S.SNP.1:39925836 chr01:039925836 0 W/39925836-39925836 FN981-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN4038-S.SNP.1:39940092 chr01:039940092 0 W/39940092-39940092 FN4038-S SNP G -> A AC=1;AN=168;BQB=0.306644;DP=2528;DP4=1352,1043,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.01739e-09;MQSB=0.999803;RPB=0.74239;SGB=39.2004;VDB=0.585174;EFF=INTRON(MODIFIER||||524|LOC_Os01g68760|protein_coding|CODING|LOC_Os01g68760.1|12|1) FN1463-S.SNP.1:39945586 chr01:039945586 0 W/39945586-39945586 FN1463-S Single Base Substitution T-C INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3851-S.SNP.1:39945621 chr01:039945621 0 W/39945621-39945621 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.999993;DP=2592;DP4=1264,1209,11,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0;MQB=7.02809e-07;MQSB=0.622637;RPB=0.995863;SGB=54.2901;VDB=0.99787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.1:39955192 chr01:039955192 0 W/39955192-39955192 FN3368-S SNP G -> T AC=1;AN=184;BQB=0.970534;DP=2730;DP4=1437,1209,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.14618e-05;MQSB=0.998916;RPB=0.575763;SGB=28.7043;VDB=0.547427;EFF=INTRON(MODIFIER||||114|LOC_Os01g68790|protein_coding|CODING|LOC_Os01g68790.1|1|1),INTRON(MODIFIER||||150|LOC_Os01g68790|protein_coding|CODING|LOC_Os01g68790.3|1|1),INTRON(MODIFIER||||72|LOC_Os01g68790|protein_coding|CODING|LOC_Os01g68790.4|1|1),INTRON(MODIFIER||||150|LOC_Os01g68790|protein_coding|CODING|LOC_Os01g68790.2|1|1) FN2792-S.SNP.1:39958105 chr01:039958105 0 W/39958105-39958105 FN2792-S SNP A -> G AC=1;AN=198;BQB=0.983506;DP=4244;DP4=2172,1727,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.24419e-13;MQSB=0.945513;RPB=0.866336;SGB=72.5051;VDB=0.509292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.1:39979026 chr01:039979026 0 W/39979026-39979026 FN1419-S Single Base Substitution G-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2136-S.SNP.1:39991000 chr01:039991000 0 W/39991000-39991000 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.0959931;DP=4035;DP4=1957,2032,9,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.49667e-11;MQSB=0.800522;RPB=0.963538;SGB=-211.183;VDB=0.500435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.1:39991209 chr01:039991209 0 W/39991209-39991209 FN2314 SNP C -> A AC=1;AN=192;BQB=0.428805;DP=4819;DP4=1985,2263,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207512;MQB=3.57308e-11;MQSB=0.426885;RPB=0.127856;SGB=-70.2434;VDB=0.37573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.1:40000919 chr01:040000919 0 W/40000919-40000919 FN3865-S SNP G -> A AC=1;AN=158;BQB=0.507402;DP=3058;DP4=1492,1474,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.09285e-07;MQSB=0.99091;RPB=0.944369;SGB=73.2838;VDB=0.959025;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.1:40014515 chr01:040014515 0 W/40014515-40014515 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1516-S.SNP.1:40015583 chr01:040015583 0 W/40015583-40015583 FN1516-S Single Base Substitution G-A INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3432-S.SNP.1:40034268 chr01:040034268 0 W/40034268-40034268 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.762391;DP=2832;DP4=1343,1366,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.52846e-06;MQSB=0.291311;RPB=0.994332;SGB=53.3568;VDB=0.698113;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.1:40034610 chr01:040034610 0 W/40034610-40034610 FN962-S Single Base Substitution C-T INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3387-S.SNP.1:40038661 chr01:040038661 0 W/40038661-40038661 FN3387-S SNP T -> C AC=1;AN=184;BQB=0.985428;DP=2591;DP4=1364,1058,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97172e-08;MQSB=0.953689;RPB=0.738372;SGB=62.3078;VDB=0.612796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.1:40041449 chr01:040041449 0 W/40041449-40041449 FN1020-S Single Base Substitution C-G INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN3550-S.SNP.1:40042878 chr01:040042878 0 W/40042878-40042878 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.931611;DP=4078;DP4=2262,1741,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00392349;MQB=1.49588e-10;MQSB=0.988945;RPB=0.296524;SGB=94.4119;VDB=0.922591;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A2|459|LOC_Os01g68920|protein_coding|CODING|LOC_Os01g68920.1|1|1) FN2681-S.SNP.1:40050264 chr01:040050264 0 W/40050264-40050264 FN2681-S SNP T -> A AC=1;AN=200;BQB=0.706752;DP=4437;DP4=1872,2336,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.5694e-09;MQSB=0.986129;RPB=0.891737;SGB=69.1109;VDB=0.27062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.1:40051859 chr01:040051859 0 W/40051859-40051859 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.79124;DP=5042;DP4=2283,2313,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.85786e-12;MQSB=0.823169;RPB=0.032151;SGB=49.1985;VDB=0.0930717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.1:40060862 chr01:040060862 0 W/40060862-40060862 FN3779-S SNP T -> C AC=1;AN=190;BQB=0.86461;DP=2607;DP4=1136,1359,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.75071e-07;MQSB=0.999553;RPB=0.162025;SGB=58.2031;VDB=0.592075;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.1:40071628 chr01:040071628 0 W/40071628-40071628 FN1336-S Single Base Substitution C-A STOP_GAINED HET LOC_Os01g68970 HYS1, putative, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1566-S.SNP.1:40075121 chr01:040075121 0 W/40075121-40075121 FN1566-S Single Base Substitution G-T INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN4031-S.SNP.1:40075482 chr01:040075482 0 W/40075482-40075482 FN4031-S SNP T -> C AC=1;AN=168;BQB=0.994376;DP=2727;DP4=1203,1387,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00953429;MQB=7.42939e-07;MQSB=8.15892e-16;RPB=0.866926;SGB=48.9237;VDB=0.235641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3946-S.SNP.1:40081107 chr01:040081107 0 W/40081107-40081107 FN3946-S SNP T -> A AC=2;AN=168;BQB=0.925832;DP=2208;DP4=988,988,11,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.03645e-15;MQSB=0.917902;RPB=0.899099;SGB=72.4869;VDB=0.0154055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M178L|791|LOC_Os01g68990|protein_coding|CODING|LOC_Os01g68990.1|2|1) FN3946-S.SNP.1:40081108 chr01:040081108 0 W/40081108-40081108 FN3946-S SNP T -> A AC=2;AN=168;BQB=0.834071;DP=2203;DP4=982,1101,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.50194e-16;MQSB=0.997732;RPB=0.973009;SGB=86.2102;VDB=0.00277749;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A177|791|LOC_Os01g68990|protein_coding|CODING|LOC_Os01g68990.1|2|1) FN436-S.SNP.1:40082094 chr01:040082094 0 W/40082094-40082094 FN436-S Single Base Substitution G-A INTRON HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN475-S.SNP.1:40082275 chr01:040082275 0 W/40082275-40082275 FN475-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os01g68990 retrotransposon, putative, centromere-specific, expressed SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. W453-3-1.SNP.1:40082942 chr01:040082942 0 W/40082942-40082942 W453-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2704-S.SNP.1:40085038 chr01:040085038 0 W/40085038-40085038 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.229811;DP=5415;DP4=2726,2453,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77338e-15;MQSB=0.678139;RPB=0.670612;SGB=60.747;VDB=0.706886;EFF=INTRON(MODIFIER||||307|LOC_Os01g69000|protein_coding|CODING|LOC_Os01g69000.1|1|1) FN2663-S.SNP.1:40089933 chr01:040089933 0 W/40089933-40089933 FN2663-S SNP C -> G AC=1;AN=200;BQB=0.919863;DP=4907;DP4=2587,2103,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203791;MQB=2.88439e-10;MQSB=0.631378;RPB=0.982548;SGB=51.0851;VDB=0.828432;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.1:40092374 chr01:040092374 0 W/40092374-40092374 FN-236 Single Base Substitution G-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN752-S.SNP.1:40098329 chr01:040098329 0 W/40098329-40098329 FN752-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g69020 retrotransposon protein, putative, unclassified, expressed SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1725-S.SNP.1:40100881 chr01:040100881 0 W/40100881-40100881 FN1725-S SNP C -> A AC=1;AN=188;BQB=0.00826851;DP=3890;DP4=1936,1911,20,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.69141e-11;MQSB=0.944687;RPB=0.857714;SGB=-149.002;VDB=0.752549;EFF=INTERGENIC(MODIFIER||||||||||1) FN570-S.SNP.1:40101497 chr01:040101497 0 W/40101497-40101497 FN570-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN734-S.SNP.1:40104606 chr01:040104606 0 W/40104606-40104606 FN734-S Single Base Substitution T-C INTRON HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN2765-S.SNP.1:40115858 chr01:040115858 0 W/40115858-40115858 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.684873;DP=4040;DP4=2045,1852,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09022e-06;MQSB=0.0858135;RPB=0.18481;SGB=36.5539;VDB=0.579086;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.1:40126191 chr01:040126191 0 W/40126191-40126191 FN1577-S Single Base Substitution C-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3828-S.SNP.1:40126833 chr01:040126833 0 W/40126833-40126833 FN3828-S SNP G -> A AC=1;AN=190;BQB=0.948354;DP=2660;DP4=1274,1289,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.25503e-06;MQSB=0.949064;RPB=0.880483;SGB=13.4442;VDB=0.940899;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.1:40130855 chr01:040130855 0 W/40130855-40130855 FN323-S Single Base Substitution G-A INTRON HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2481.SNP.1:40132656 chr01:040132656 0 W/40132656-40132656 FN2481 SNP A -> G AC=2;AN=200;BQB=0.466382;DP=4978;DP4=2253,2458,21,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.32816e-16;MQSB=0.99978;RPB=0.995463;SGB=112.373;VDB=0.709413;EFF=UTR_3_PRIME(MODIFIER||515||435|LOC_Os01g69050|protein_coding|CODING|LOC_Os01g69050.1|7|1),UTR_3_PRIME(MODIFIER||515||421|LOC_Os01g69050|protein_coding|CODING|LOC_Os01g69050.2|6|1),UTR_3_PRIME(MODIFIER||444||418|LOC_Os01g69050|protein_coding|CODING|LOC_Os01g69050.3|8|1) FN-78.SNP.1:40133323 chr01:040133323 0 W/40133323-40133323 FN-78 Single Base Substitution T-C INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2768-S.SNP.1:40138279 chr01:040138279 0 W/40138279-40138279 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.958398;DP=4390;DP4=1850,2360,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.46432e-09;MQSB=0.619528;RPB=0.999846;SGB=40.149;VDB=0.720497;EFF=UTR_3_PRIME(MODIFIER||683||379|LOC_Os01g69060|protein_coding|CODING|LOC_Os01g69060.1|15|1),INTRON(MODIFIER||||363|LOC_Os01g69070|protein_coding|CODING|LOC_Os01g69070.1|4|1) FN2768-S.SNP.1:40138280 chr01:040138280 0 W/40138280-40138280 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.965688;DP=4389;DP4=1836,2366,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.18754e-09;MQSB=0.694157;RPB=0.822604;SGB=40.149;VDB=0.544436;EFF=UTR_3_PRIME(MODIFIER||684||379|LOC_Os01g69060|protein_coding|CODING|LOC_Os01g69060.1|15|1),INTRON(MODIFIER||||363|LOC_Os01g69070|protein_coding|CODING|LOC_Os01g69070.1|4|1) FN2308.SNP.1:40148264 chr01:040148264 0 W/40148264-40148264 FN2308 SNP C -> T AC=1;AN=192;BQB=0.946537;DP=4682;DP4=2037,2406,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.79989e-07;MQSB=0.33087;RPB=0.422533;SGB=16.0922;VDB=0.653752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E142K|400|LOC_Os01g69080|protein_coding|CODING|LOC_Os01g69080.1|2|1) FN2308.SNP.1:40148660 chr01:040148660 0 W/40148660-40148660 FN2308 SNP T -> A AC=1;AN=192;BQB=0.94233;DP=5049;DP4=2352,2338,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.3325e-15;MQSB=0.873298;RPB=0.558575;SGB=22.9983;VDB=0.103883;EFF=INTRON(MODIFIER||||400|LOC_Os01g69080|protein_coding|CODING|LOC_Os01g69080.1|1|1) FN459-S.SNP.1:40150178 chr01:040150178 0 W/40150178-40150178 FN459-S Single Base Substitution G-A INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN-238.SNP.1:40151044 chr01:040151044 0 W/40151044-40151044 FN-238 Single Base Substitution T-G INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3385-S.SNP.1:40152356 chr01:040152356 0 W/40152356-40152356 FN3385-S SNP A -> T AC=1;AN=184;BQB=0.656993;DP=3663;DP4=1907,1489,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000273;MQB=5.5536e-11;MQSB=0.715441;RPB=0.798285;SGB=84.9167;VDB=0.0855059;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.1:40156816 chr01:040156816 0 W/40156816-40156816 FN3819-S SNP T -> A AC=1;AN=190;BQB=0.815223;DP=2601;DP4=1118,1215,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60839e-08;MQSB=0.854674;RPB=0.836108;SGB=23.6597;VDB=0.748939;EFF=INTRON(MODIFIER||||404|LOC_Os01g69090|protein_coding|CODING|LOC_Os01g69090.1|1|1) FN1436-S.SNP.1:40160053 chr01:040160053 0 W/40160053-40160053 FN1436-S Single Base Substitution C-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN477-S.SNP.1:40163508 chr01:040163508 0 W/40163508-40163508 FN477-S Single Base Substitution G-A INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3460-S.SNP.1:40165816 chr01:040165816 0 W/40165816-40165816 FN3460-S SNP A -> T AC=1;AN=184;BQB=0.987005;DP=2594;DP4=1269,1264,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.21572e-06;MQSB=0.980076;RPB=0.140954;SGB=35.1773;VDB=0.147629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.1:40166274 chr01:040166274 0 W/40166274-40166274 FN2212-S SNP C -> T AC=2;AN=190;BQB=0.195112;DP=5076;DP4=2030,2679,33,52;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.880348;RPB=0.716739;SGB=328.939;VDB=0.378487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.1:40171836 chr01:040171836 0 W/40171836-40171836 FN3495-S SNP C -> T AC=1;AN=188;BQB=0.935757;DP=2562;DP4=1268,1220,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37633e-05;MQSB=0.981348;RPB=0.117294;SGB=39.8925;VDB=0.389245;EFF=SPLICE_SITE_REGION(LOW||||113|LOC_Os01g69110|protein_coding|CODING|LOC_Os01g69110.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R62|113|LOC_Os01g69110|protein_coding|CODING|LOC_Os01g69110.1|4|1) FN2110-S.SNP.1:40174251 chr01:040174251 0 W/40174251-40174251 FN2110-S SNP C -> A AC=2;AN=168;BQB=0.961347;DP=3888;DP4=1994,1840,11,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87234e-14;MQSB=0.988883;RPB=0.579903;SGB=-9.34108;VDB=0.487154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.1:40174602 chr01:040174602 0 W/40174602-40174602 FN1094-S Single Base Substitution G-A INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2167-S.SNP.1:40182259 chr01:040182259 0 W/40182259-40182259 FN2167-S SNP T -> A AC=2;AN=168;BQB=0.920748;DP=3665;DP4=1680,1934,14,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.5213e-17;MQSB=0.998578;RPB=0.719088;SGB=35.6687;VDB=0.856556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.1:40183709 chr01:040183709 0 W/40183709-40183709 FN3285-S SNP T -> C AC=1;AN=184;BQB=0.791078;DP=2803;DP4=1312,1409,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14232e-06;MQSB=0.96725;RPB=0.999302;SGB=39.699;VDB=0.935066;EFF=INTRON(MODIFIER||||818|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.1|18|1),INTRON(MODIFIER||||782|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.2|18|1) FN2203-S.SNP.1:40184211 chr01:040184211 0 W/40184211-40184211 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.983408;DP=4822;DP4=2183,2338,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.47582e-09;MQSB=0.986259;RPB=0.968649;SGB=53.8699;VDB=0.708022;EFF=INTRON(MODIFIER||||818|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.1|17|1),INTRON(MODIFIER||||782|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.2|17|1) FN2756-S.SNP.1:40187573 chr01:040187573 0 W/40187573-40187573 FN2756-S SNP T -> A AC=1;AN=200;BQB=0.928594;DP=4928;DP4=2190,2501,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30566e-14;MQSB=0.897374;RPB=0.718658;SGB=50.3263;VDB=0.275404;EFF=INTRON(MODIFIER||||818|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.1|8|1),INTRON(MODIFIER||||782|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.2|8|1) FN2711-S.SNP.1:40189430 chr01:040189430 0 W/40189430-40189430 FN2711-S SNP A -> G AC=2;AN=200;BQB=0.310277;DP=5173;DP4=2364,2553,10,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.99876e-16;MQSB=0.946487;RPB=0.570476;SGB=101.557;VDB=0.478788;EFF=INTRON(MODIFIER||||818|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.1|1|1),INTRON(MODIFIER||||782|LOC_Os01g69130|protein_coding|CODING|LOC_Os01g69130.2|1|1) FN358-S.SNP.1:40192840 chr01:040192840 0 W/40192840-40192840 FN358-S Single Base Substitution A-G INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2249-S.SNP.1:40194540 chr01:040194540 0 W/40194540-40194540 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.938138;DP=4088;DP4=1957,1870,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.73076e-07;MQSB=0.997615;RPB=0.894606;SGB=28.9929;VDB=0.869789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S309N|368|LOC_Os01g69140|protein_coding|CODING|LOC_Os01g69140.1|3|1) FN930-S.SNP.1:40203401 chr01:040203401 0 W/40203401-40203401 FN930-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g69160 regulatory protein, putative, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN3579-S.SNP.1:40204231 chr01:040204231 0 W/40204231-40204231 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.115348;DP=2692;DP4=1469,1130,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36655e-06;MQSB=0.231981;RPB=0.0333329;SGB=28.6195;VDB=0.120459;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.1:40211109 chr01:040211109 0 W/40211109-40211109 FN1033-S Single Base Substitution G-T INTERGENIC HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3945-S.SNP.1:40211801 chr01:040211801 0 W/40211801-40211801 FN3945-S SNP A -> G AC=1;AN=168;BQB=0.902385;DP=2889;DP4=1535,1200,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.04748e-06;MQSB=0.946208;RPB=0.838898;SGB=34.4498;VDB=0.853272;EFF=INTRON(MODIFIER||||372|LOC_Os01g69190|protein_coding|CODING|LOC_Os01g69190.1|1|1) FN-268.SNP.1:40212844 chr01:040212844 0 W/40212844-40212844 FN-268 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1033-S.SNP.1:40218609 chr01:040218609 0 W/40218609-40218609 FN1033-S Single Base Substitution T-C INTERGENIC HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2630-S.SNP.1:40220298 chr01:040220298 0 W/40220298-40220298 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.83114;DP=4823;DP4=2125,2471,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54785e-11;MQSB=0.970988;RPB=0.277553;SGB=11.0951;VDB=0.87377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1001-S.SNP.1:40221326 chr01:040221326 0 W/40221326-40221326 FN1001-S Single Base Substitution G-C INTRON HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN628-S.SNP.1:40221326 chr01:040221326 0 W/40221326-40221326 FN628-S Single Base Substitution G-C INTRON HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1287-S.SNP.1:40225892 chr01:040225892 0 W/40225892-40225892 FN1287-S Single Base Substitution C-A INTRON HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1287-S.SNP.1:40225895 chr01:040225895 0 W/40225895-40225895 FN1287-S Single Base Substitution T-A INTRON HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2147-S.SNP.1:40234740 chr01:040234740 0 W/40234740-40234740 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.342455;DP=3739;DP4=1678,2035,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.88163e-06;MQSB=0.982759;RPB=0.906945;SGB=5.62151;VDB=0.860465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.1:40236435 chr01:040236435 0 W/40236435-40236435 FN1660-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g69230 exo70 exocyst complex subunit domain containing protein, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1516-S.SNP.1:40238067 chr01:040238067 0 W/40238067-40238067 FN1516-S Single Base Substitution G-A UTR_3_PRIME Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3501-S.SNP.1:40257617 chr01:040257617 0 W/40257617-40257617 FN3501-S SNP G -> A AC=1;AN=188;BQB=0.980927;DP=3101;DP4=1616,1415,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.26753e-06;MQSB=0.936112;RPB=0.302832;SGB=35.3493;VDB=0.687358;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R173|369|LOC_Os01g69270|protein_coding|CODING|LOC_Os01g69270.1|3|1) FN3663-S.SNP.1:40258067 chr01:040258067 0 W/40258067-40258067 FN3663-S SNP G -> A AC=1;AN=190;BQB=0.336459;DP=2075;DP4=961,999,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0322361;MQSB=0.0285889;RPB=0.98504;SGB=30.8803;VDB=0.277376;EFF=INTRON(MODIFIER||||369|LOC_Os01g69270|protein_coding|CODING|LOC_Os01g69270.1|1|1) FN3849-S.SNP.1:40259023 chr01:040259023 0 W/40259023-40259023 FN3849-S SNP A -> G AC=1;AN=158;BQB=0.940527;DP=2638;DP4=1460,1053,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=3.65755e-05;MQSB=0.429958;RPB=0.990126;SGB=34.0735;VDB=0.496021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.1:40260068 chr01:040260068 0 W/40260068-40260068 FN1731-S SNP A -> G AC=1;AN=188;BQB=0.145924;DP=4073;DP4=2197,1828,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04039e-10;MQSB=0.998722;RPB=0.996275;SGB=-98.724;VDB=0.195963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1727-S.SNP.1:40261020 chr01:040261020 0 W/40261020-40261020 FN1727-S SNP A -> G AC=1;AN=188;BQB=0.0248572;DP=1934;DP4=718,1152,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000698955;MQSB=0.953855;RPB=0.885075;SGB=-54.619;VDB=0.505717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.1:40261481 chr01:040261481 0 W/40261481-40261481 FN2140-S SNP C -> T AC=2;AN=168;BQB=0.271221;DP=2274;DP4=1474,724,17,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.82294e-10;MQSB=0.309809;RPB=0.686902;SGB=21.3605;VDB=0.918917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.1:40262749 chr01:040262749 0 W/40262749-40262749 FN3532-S SNP G -> A AC=2;AN=188;BQB=0.95339;DP=3216;DP4=1287,1755,24,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.3429e-29;MQSB=0.690889;RPB=0.695669;SGB=194.659;VDB=0.96141;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.1:40270292 chr01:040270292 0 W/40270292-40270292 FN950-S Single Base Substitution A-C INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2293.SNP.1:40272336 chr01:040272336 0 W/40272336-40272336 FN2293 SNP G -> A AC=2;AN=192;BQB=0.88503;DP=4761;DP4=2189,2320,21,10;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.76318e-16;MQSB=0.995331;RPB=0.999986;SGB=100.374;VDB=0.756877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.1:40292919 chr01:040292919 0 W/40292919-40292919 FN1533-S Single Base Substitution T-A INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN4172-S.SNP.1:40299830 chr01:040299830 0 W/40299830-40299830 FN4172-S SNP C -> T AC=1;AN=170;BQB=0.869764;DP=2150;DP4=990,1082,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000132485;MQSB=0.997347;RPB=0.860876;SGB=27.9928;VDB=0.525133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.1:40305275 chr01:040305275 0 W/40305275-40305275 FN1030-S Single Base Substitution C-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2461.SNP.1:40306067 chr01:040306067 0 W/40306067-40306067 FN2461 SNP C -> T AC=1;AN=200;BQB=0.998067;DP=3533;DP4=1865,1353,4,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00254741;MQB=0.0418227;MQSB=4.86301e-21;RPB=0.93728;SGB=29.4541;VDB=0.930855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.1:40309661 chr01:040309661 0 W/40309661-40309661 FN3389-S SNP G -> T AC=2;AN=184;BQB=0.963681;DP=3366;DP4=1570,1705,15,29;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0282234;MQB=5.77901e-12;MQSB=0.166944;RPB=0.981701;SGB=144.923;VDB=0.537136;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C450F|585|LOC_Os01g69810|protein_coding|CODING|LOC_Os01g69810.1|5|1) FN3597-S.SNP.1:40311439 chr01:040311439 0 W/40311439-40311439 FN3597-S SNP A -> G AC=1;AN=188;BQB=0.722944;DP=2952;DP4=1151,1557,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000109201;MQSB=0.0149739;RPB=0.328539;SGB=30.8063;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.1:40315407 chr01:040315407 0 W/40315407-40315407 FN4041-S SNP G -> C AC=1;AN=168;BQB=0.959281;DP=2951;DP4=1486,1373,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0491359;MQB=0.976277;MQSB=0.181186;RPB=0.993309;SGB=38.8805;VDB=0.436394;EFF=INTRON(MODIFIER||||841|LOC_Os01g69820|protein_coding|CODING|LOC_Os01g69820.1|4|1) FN-73.SNP.1:40322291 chr01:040322291 0 W/40322291-40322291 FN-73 Single Base Substitution T-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2577-S.SNP.1:40329601 chr01:040329601 0 W/40329601-40329601 FN2577-S SNP T -> C AC=1;AN=198;BQB=0.896082;DP=4341;DP4=2264,1907,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14358e-08;MQSB=0.954082;RPB=0.98775;SGB=34.5346;VDB=0.987448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.1:40330894 chr01:040330894 0 W/40330894-40330894 FN2180-S SNP T -> A AC=2;AN=190;BQB=0.926348;DP=3596;DP4=1270,1900,15,28;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00083426;MQB=1.01655e-16;MQSB=3.94668e-35;RPB=0.686818;SGB=47.6197;VDB=0.00599092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.1:40330895 chr01:040330895 0 W/40330895-40330895 FN2180-S SNP C -> A AC=2;AN=190;BQB=0.642955;DP=3565;DP4=1316,1962,14,26;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000841515;MQB=6.37954e-16;MQSB=8.65866e-33;RPB=0.870014;SGB=42.958;VDB=0.00444746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3575-S.SNP.1:40340487 chr01:040340487 0 W/40340487-40340487 FN3575-S SNP C -> T AC=1;AN=188;BQB=0.994735;DP=3309;DP4=1548,1628,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=6.16287e-06;MQSB=4.24734e-06;RPB=0.376632;SGB=48.979;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.1:40341322 chr01:040341322 0 W/40341322-40341322 FN1557-S Single Base Substitution G-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2210-S.SNP.1:40352117 chr01:040352117 0 W/40352117-40352117 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.469441;DP=4793;DP4=2425,2168,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75227e-09;MQSB=0.795329;RPB=0.995262;SGB=80.9724;VDB=0.661588;EFF=INTRON(MODIFIER||||219|LOC_Os01g69850|protein_coding|CODING|LOC_Os01g69850.1|1|1) FN1506-S.SNP.1:40358435 chr01:040358435 0 W/40358435-40358435 FN1506-S Single Base Substitution A-G INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1384-S.SNP.1:40366243 chr01:040366243 0 W/40366243-40366243 FN1384-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2096-S.SNP.1:40366243 chr01:040366243 0 W/40366243-40366243 FN2096-S SNP G -> A AC=1;AN=168;BQB=0.938875;DP=3575;DP4=2239,1298,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=3.64948e-09;MQSB=0.000205014;RPB=0.367566;SGB=62.1945;VDB=0.923053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.1:40366243 chr01:040366243 0 W/40366243-40366243 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.299229;DP=5285;DP4=2737,2324,19,20;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.81353e-15;MQSB=0.0497892;RPB=0.990109;SGB=173.999;VDB=0.340156;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.1:40366243 chr01:040366243 0 W/40366243-40366243 FN773-S Single Base Substitution G-A INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN_N1-150-1.SNP.1:40366243 chr01:040366243 0 W/40366243-40366243 FN_N1-150-1 Single Base Substitution G-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2347.SNP.1:40371060 chr01:040371060 0 W/40371060-40371060 FN2347 SNP T -> G AC=1;AN=192;BQB=0.9991;DP=4701;DP4=2378,1980,20,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.32123e-14;MQSB=4.65726e-05;RPB=0.538914;SGB=26.127;VDB=0.798564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.1:40371333 chr01:040371333 0 W/40371333-40371333 FN3626-S SNP G -> T AC=1;AN=190;BQB=0.997579;DP=2759;DP4=1125,1489,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5176e-06;MQSB=0.980677;RPB=0.906087;SGB=25.439;VDB=0.230965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.1:40376846 chr01:040376846 0 W/40376846-40376846 FN2246-S SNP G -> A AC=1;AN=190;BQB=0.968066;DP=5126;DP4=2562,2307,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00370659;MQB=0.00886684;MQSB=0.74261;RPB=0.857419;SGB=18.552;VDB=0.995846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.1:40380146 chr01:040380146 0 W/40380146-40380146 FN1638-S Single Base Substitution C-T INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3413-S.SNP.1:40393028 chr01:040393028 0 W/40393028-40393028 FN3413-S SNP A -> G AC=1;AN=184;BQB=0.991307;DP=2922;DP4=1601,1253,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00136893;MQB=0.542935;MQSB=0.0153151;RPB=0.958387;SGB=32.2261;VDB=0.567407;EFF=UTR_3_PRIME(MODIFIER||2267||113|LOC_Os01g69904|protein_coding|CODING|LOC_Os01g69904.1|1|1) FN1319-S.SNP.1:40398194 chr01:040398194 0 W/40398194-40398194 FN1319-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g69910 calmodulin-binding transcription activator, putative, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2530-S.SNP.1:40400482 chr01:040400482 0 W/40400482-40400482 FN2530-S SNP G -> T AC=1;AN=198;BQB=0.79494;DP=4440;DP4=2246,1890,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.34174e-11;MQSB=0.923339;RPB=0.999798;SGB=44.9151;VDB=0.750215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E293D|878|LOC_Os01g69910|protein_coding|CODING|LOC_Os01g69910.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E293D|850|LOC_Os01g69910|protein_coding|CODING|LOC_Os01g69910.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E181D|616|LOC_Os01g69910|protein_coding|CODING|LOC_Os01g69910.3|6|1) FN3433-S.SNP.1:40407723 chr01:040407723 0 W/40407723-40407723 FN3433-S SNP C -> T AC=1;AN=184;BQB=0.985275;DP=3017;DP4=1341,1540,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.66867e-05;MQSB=0.957215;RPB=0.999488;SGB=21.6609;VDB=0.756064;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P347|1023|LOC_Os01g69920|protein_coding|CODING|LOC_Os01g69920.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P190|866|LOC_Os01g69920|protein_coding|CODING|LOC_Os01g69920.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P347|938|LOC_Os01g69920|protein_coding|CODING|LOC_Os01g69920.3|4|1) FN1046-S.SNP.1:40416286 chr01:040416286 0 W/40416286-40416286 FN1046-S Single Base Substitution G-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN443-S.SNP.1:40418586 chr01:040418586 0 W/40418586-40418586 FN443-S Single Base Substitution G-A INTERGENIC HOMO SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN-137.SNP.1:40421484 chr01:040421484 0 W/40421484-40421484 FN-137 Single Base Substitution C-A INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2657-S.SNP.1:40423792 chr01:040423792 0 W/40423792-40423792 FN2657-S SNP C -> T AC=2;AN=200;BQB=0.296766;DP=4395;DP4=2335,1801,30,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.97389e-32;MQSB=0.90178;RPB=0.26117;SGB=70.4864;VDB=0.00123254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.1:40427164 chr01:040427164 0 W/40427164-40427164 FN2102-S SNP C -> T AC=2;AN=168;BQB=0.0616559;DP=4225;DP4=2238,1911,21,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.71608e-18;MQSB=0.999752;RPB=0.59913;SGB=-201.44;VDB=0.752726;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.1:40431153 chr01:040431153 0 W/40431153-40431153 FN1156-XA21 Single Base Substitution C-T INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3413-S.SNP.1:40446718 chr01:040446718 0 W/40446718-40446718 FN3413-S SNP G -> T AC=1;AN=184;BQB=0.988991;DP=2801;DP4=1038,1634,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10577e-05;MQSB=0.346739;RPB=0.931487;SGB=44.2207;VDB=0.248694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.1:40447378 chr01:040447378 0 W/40447378-40447378 FN2284 SNP T -> C AC=1;AN=192;BQB=0.850563;DP=5214;DP4=2247,2562,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.42043e-14;MQSB=0.838995;RPB=0.942933;SGB=75.4235;VDB=0.692845;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.1:40453882 chr01:040453882 0 W/40453882-40453882 FN-179 Single Base Substitution C-A UTR_5_PRIME HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. W313-1-1-1-1.SNP.1:40456904 chr01:040456904 0 W/40456904-40456904 W313-1-1-1-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2164-S.SNP.1:40457029 chr01:040457029 0 W/40457029-40457029 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.0886279;DP=4026;DP4=2222,1754,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.26126e-09;MQSB=0.994418;RPB=0.511531;SGB=-103.201;VDB=0.568405;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.1:40458821 chr01:040458821 0 W/40458821-40458821 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.44012;DP=2428;DP4=1263,1098,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.98262e-10;MQSB=0.969499;RPB=0.999651;SGB=-15.6616;VDB=0.217855;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.1:40467852 chr01:040467852 0 W/40467852-40467852 FN1043-S Single Base Substitution G-A INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN4174-S.SNP.1:40468980 chr01:040468980 0 W/40468980-40468980 FN4174-S SNP T -> C AC=1;AN=170;BQB=0.869871;DP=2678;DP4=948,1536,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00112024;MQB=8.14536e-05;MQSB=0.210565;RPB=0.852649;SGB=38.3207;VDB=0.315657;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.1:40472121 chr01:040472121 0 W/40472121-40472121 FN-117 Single Base Substitution C-A INTERGENIC HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN1692-S.SNP.1:40472533 chr01:040472533 0 W/40472533-40472533 FN1692-S SNP C -> A AC=2;AN=188;BQB=0.274047;DP=3967;DP4=1877,2038,17,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.78076e-20;MQSB=0.726617;RPB=0.248866;SGB=135.196;VDB=0.684526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.1:40476969 chr01:040476969 0 W/40476969-40476969 FN1434-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-274.SNP.1:40488205 chr01:040488205 0 W/40488205-40488205 FN-274 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g69990 GYF domain containing protein, putative, expressed SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-274.SNP.1:40488206 chr01:040488206 0 W/40488206-40488206 FN-274 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g69990 GYF domain containing protein, putative, expressed SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3626-S.SNP.1:40493606 chr01:040493606 0 W/40493606-40493606 FN3626-S SNP A -> G AC=1;AN=190;BQB=0.874088;DP=2546;DP4=1244,1188,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.45235e-07;MQSB=0.107686;RPB=0.823522;SGB=39.6545;VDB=0.366444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.1:40500571 chr01:040500571 0 W/40500571-40500571 FN3789-S SNP C -> A AC=2;AN=190;BQB=0.984421;DP=2361;DP4=1117,1103,11,10;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=3.28597e-12;MQSB=0.858272;RPB=0.49918;SGB=90.0802;VDB=0.688488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.1:40502152 chr01:040502152 0 W/40502152-40502152 FN1076-S Single Base Substitution C-T INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2122-S.SNP.1:40505036 chr01:040505036 0 W/40505036-40505036 FN2122-S SNP C -> A AC=1;AN=168;BQB=0.426166;DP=4027;DP4=1679,2307,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=8.17437e-06;MQSB=0.111091;RPB=0.865045;SGB=-72.7757;VDB=0.38414;EFF=INTRON(MODIFIER||||509|LOC_Os01g70020|protein_coding|CODING|LOC_Os01g70020.1|7|1) FN2424.SNP.1:40505371 chr01:040505371 0 W/40505371-40505371 FN2424 SNP C -> T AC=1;AN=200;BQB=0.999938;DP=4994;DP4=2562,2151,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07752e-11;MQSB=0.974573;RPB=0.668688;SGB=39.9056;VDB=0.727569;EFF=INTRON(MODIFIER||||509|LOC_Os01g70020|protein_coding|CODING|LOC_Os01g70020.1|7|1) FN-68.SNP.1:40538050 chr01:040538050 0 W/40538050-40538050 FN-68 Single Base Substitution C-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN901-S.SNP.1:40538178 chr01:040538178 0 W/40538178-40538178 FN901-S Single Base Substitution C-T INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN713-S.SNP.1:40538347 chr01:040538347 0 W/40538347-40538347 FN713-S Single Base Substitution C-T INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2120-S.SNP.1:40545369 chr01:040545369 0 W/40545369-40545369 FN2120-S SNP A -> C AC=2;AN=168;BQB=0.41897;DP=3714;DP4=1885,1751,30,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.282e-26;MQSB=0.779708;RPB=0.067899;SGB=-108.867;VDB=0.453666;EFF=INTRON(MODIFIER||||490|LOC_Os01g70060|protein_coding|CODING|LOC_Os01g70060.1|3|1),INTRON(MODIFIER||||490|LOC_Os01g70060|protein_coding|CODING|LOC_Os01g70060.2|2|1) FN3687-S.SNP.1:40555719 chr01:040555719 0 W/40555719-40555719 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.994674;DP=2805;DP4=1345,1344,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.47512e-09;MQSB=0.916311;RPB=0.347015;SGB=58.2031;VDB=0.548359;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.1:40561698 chr01:040561698 0 W/40561698-40561698 FN1220-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN871-S.SNP.1:40571906 chr01:040571906 0 W/40571906-40571906 FN871-S Single Base Substitution G-A INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2475.SNP.1:40604068 chr01:040604068 0 W/40604068-40604068 FN2475 SNP T -> A AC=1;AN=200;BQB=0.829234;DP=5845;DP4=2488,3128,6,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000342173;MQB=6.31922e-07;MQSB=3.14959e-29;RPB=0.848408;SGB=68.0801;VDB=0.873176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.1:40605266 chr01:040605266 0 W/40605266-40605266 FN2268-S SNP T -> A AC=1;AN=190;BQB=0.958693;DP=5205;DP4=2505,2309,21,22;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.05229e-15;MQSB=0.0654345;RPB=0.967138;SGB=0.0710663;VDB=0.109042;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.1:40611596 chr01:040611596 0 W/40611596-40611596 FN-170 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g70170 transaldolase, putative, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.1:40611600 chr01:040611600 0 W/40611600-40611600 FN-170 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1399-S.SNP.1:40617928 chr01:040617928 0 W/40617928-40617928 FN1399-S Single Base Substitution A-C INTRON HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2581-S.SNP.1:40620710 chr01:040620710 0 W/40620710-40620710 FN2581-S SNP A -> T AC=1;AN=198;BQB=0.859717;DP=4291;DP4=2354,1709,10,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08379e-06;MQSB=0.771271;RPB=0.946153;SGB=49.5489;VDB=0.13933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.1:40622375 chr01:040622375 0 W/40622375-40622375 FN1302-S Single Base Substitution G-T INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1302-S.SNP.1:40622376 chr01:040622376 0 W/40622376-40622376 FN1302-S Single Base Substitution G-T INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN-109.SNP.1:40623501 chr01:040623501 0 W/40623501-40623501 FN-109 Single Base Substitution A-G INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN-109.SNP.1:40623504 chr01:040623504 0 W/40623504-40623504 FN-109 Single Base Substitution A-T INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN3776-S.SNP.1:40627554 chr01:040627554 0 W/40627554-40627554 FN3776-S SNP G -> A AC=1;AN=190;BQB=0.824224;DP=2706;DP4=1277,1345,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.55442e-07;MQSB=0.998846;RPB=0.437397;SGB=39.6545;VDB=0.107093;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L194|415|LOC_Os01g70190|protein_coding|CODING|LOC_Os01g70190.1|3|1) FN753-S.SNP.1:40628388 chr01:040628388 0 W/40628388-40628388 FN753-S Single Base Substitution G-T INTRON HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN904-S.SNP.1:40631854 chr01:040631854 0 W/40631854-40631854 FN904-S Single Base Substitution T-G INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1639-S.SNP.1:40637964 chr01:040637964 0 W/40637964-40637964 FN1639-S Single Base Substitution A-G INTERGENIC Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN819-S.SNP.1:40643922 chr01:040643922 0 W/40643922-40643922 FN819-S Single Base Substitution A-G INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3789-S.SNP.1:40646355 chr01:040646355 0 W/40646355-40646355 FN3789-S SNP G -> A AC=2;AN=190;BQB=0.980635;DP=2486;DP4=1011,1403,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.56789e-10;MQSB=0.957929;RPB=0.987498;SGB=36.4291;VDB=0.904348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V73M|247|LOC_Os01g70210|protein_coding|CODING|LOC_Os01g70210.1|2|1) FN2431.SNP.1:40648988 chr01:040648988 0 W/40648988-40648988 FN2431 SNP G -> A AC=1;AN=200;BQB=0.999885;DP=4611;DP4=2310,1996,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.94718e-10;MQSB=0.976549;RPB=0.672369;SGB=63.4749;VDB=0.704505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.1:40648989 chr01:040648989 0 W/40648989-40648989 FN2431 SNP A -> T AC=1;AN=200;BQB=0.559534;DP=4605;DP4=2268,1990,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.49703e-11;MQSB=0.999397;RPB=0.614474;SGB=47.4799;VDB=0.579878;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.1:40656343 chr01:040656343 0 W/40656343-40656343 W313-1-1-1-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g70220 histone-lysine N-methyltransferase, putative, expressed SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN4167-S.SNP.1:40657776 chr01:040657776 0 W/40657776-40657776 FN4167-S SNP G -> A AC=1;AN=170;BQB=0.688481;DP=2148;DP4=1125,983,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.18621e-05;MQSB=0.952476;RPB=0.794547;SGB=24.5502;VDB=0.4228;EFF=INTRON(MODIFIER||||663|LOC_Os01g70220|protein_coding|CODING|LOC_Os01g70220.1|7|1) FN2134-S.SNP.1:40660723 chr01:040660723 0 W/40660723-40660723 FN2134-S SNP C -> T AC=2;AN=168;BQB=0.789704;DP=4356;DP4=2271,2002,35,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.34717e-32;MQSB=0.981923;RPB=0.745299;SGB=3.1526;VDB=0.95083;EFF=INTRON(MODIFIER||||663|LOC_Os01g70220|protein_coding|CODING|LOC_Os01g70220.1|11|1) FN701-S.SNP.1:40672743 chr01:040672743 0 W/40672743-40672743 FN701-S Single Base Substitution T-C INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1283-S.SNP.1:40673511 chr01:040673511 0 W/40673511-40673511 FN1283-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN-86.SNP.1:40674142 chr01:040674142 0 W/40674142-40674142 FN-86 Single Base Substitution A-G INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN3364-S.SNP.1:40678994 chr01:040678994 0 W/40678994-40678994 FN3364-S SNP T -> C AC=1;AN=184;BQB=0.999678;DP=3059;DP4=1529,1380,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46046e-05;MQSB=0.988226;RPB=0.314284;SGB=10.6662;VDB=0.0242286;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.1:40682834 chr01:040682834 0 W/40682834-40682834 FN909-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN-295.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN-295 Single Base Substitution T-A INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1623-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN1623-S Single Base Substitution T-A INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1697-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN1697-S SNP T -> A AC=2;AN=188;BQB=0.246788;DP=3754;DP4=2098,1551,29,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.61271e-13;MQSB=0.592412;RPB=0.268934;SGB=-138.031;VDB=0.21831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN2113-S SNP T -> A AC=2;AN=168;BQB=0.206764;DP=3913;DP4=2216,1574,30,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.06229e-10;MQSB=0.463838;RPB=0.932943;SGB=-391.57;VDB=0.417306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN2274-S SNP T -> A AC=2;AN=188;BQB=0.0134781;DP=4436;DP4=2233,1564,26,38;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000450857;MQB=6.7152e-21;MQSB=7.9186e-25;RPB=0.910616;SGB=97.6599;VDB=0.361101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN2707-S SNP T -> A AC=2;AN=200;BQB=0.0923569;DP=4516;DP4=2345,1797,7,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000221435;MQB=1.35331e-13;MQSB=3.04329e-17;RPB=0.565434;SGB=65.9573;VDB=0.054897;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN3416-S SNP T -> A AC=1;AN=184;BQB=0.762413;DP=2878;DP4=1414,1317,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.22994e-05;MQSB=0.402124;RPB=0.848679;SGB=39.699;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN3731-S SNP T -> A AC=2;AN=190;BQB=0.8261;DP=3131;DP4=1596,1366,23,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.41657e-13;MQSB=0.0392306;RPB=0.911109;SGB=72.1834;VDB=0.0512259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN3906-S SNP T -> A AC=1;AN=158;BQB=0.961833;DP=2664;DP4=1345,1193,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=5.28649e-05;MQSB=0.906315;RPB=0.975901;SGB=27.3346;VDB=0.100284;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN4125-S SNP T -> A AC=1;AN=182;BQB=0.928935;DP=2824;DP4=1421,1307,10,4;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=1.89027e-07;MQSB=0.918708;RPB=0.523625;SGB=39.1386;VDB=0.418721;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN456-S Single Base Substitution T-A INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN837-S.SNP.1:40685653 chr01:040685653 0 W/40685653-40685653 FN837-S Single Base Substitution T-A INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3325-S.SNP.1:40694558 chr01:040694558 0 W/40694558-40694558 FN3325-S SNP T -> C AC=1;AN=184;BQB=0.959243;DP=3085;DP4=1453,1496,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.78159e-06;MQSB=0.944911;RPB=0.0852086;SGB=35.1773;VDB=0.29184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.1:40698341 chr01:040698341 0 W/40698341-40698341 FN3485-S SNP T -> A AC=2;AN=184;BQB=0.999401;DP=2585;DP4=1267,1165,20,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.60916e-23;MQSB=0.992678;RPB=0.998711;SGB=141.484;VDB=0.451619;EFF=INTRON(MODIFIER||||808|LOC_Os01g70270|protein_coding|CODING|LOC_Os01g70270.1|11|1),INTRON(MODIFIER||||808|LOC_Os01g70270|protein_coding|CODING|LOC_Os01g70270.2|11|1),INTRON(MODIFIER||||808|LOC_Os01g70270|protein_coding|CODING|LOC_Os01g70270.3|11|1),INTRON(MODIFIER||||776|LOC_Os01g70270|protein_coding|CODING|LOC_Os01g70270.4|11|1) FN1229-S.SNP.1:40699469 chr01:040699469 0 W/40699469-40699469 FN1229-S Single Base Substitution C-T INTRON HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1151-S.SNP.1:40702245 chr01:040702245 0 W/40702245-40702245 FN1151-S Single Base Substitution G-T INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3482-S.SNP.1:40704325 chr01:040704325 0 W/40704325-40704325 FN3482-S SNP T -> C AC=1;AN=184;BQB=0.960815;DP=2952;DP4=1487,1350,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000254784;MQSB=0.999932;RPB=0.563225;SGB=30.6558;VDB=0.115223;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.1:40737317 chr01:040737317 0 W/40737317-40737317 FN579-S Single Base Substitution G-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN-67.SNP.1:40738394 chr01:040738394 0 W/40738394-40738394 FN-67 Single Base Substitution G-C INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN4183-S.SNP.1:40739880 chr01:040739880 0 W/40739880-40739880 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.467935;DP=2739;DP4=1396,1246,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.52025e-05;MQSB=0.912179;RPB=0.76416;SGB=27.9928;VDB=0.98893;EFF=INTRON(MODIFIER||||408|LOC_Os01g70330|protein_coding|CODING|LOC_Os01g70330.1|3|1),INTRON(MODIFIER||||295|LOC_Os01g70330|protein_coding|CODING|LOC_Os01g70330.2|3|1) FN1123-S.SNP.1:40740406 chr01:040740406 0 W/40740406-40740406 FN1123-S Single Base Substitution C-T INTRON HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN724-S.SNP.1:40745964 chr01:040745964 0 W/40745964-40745964 FN724-S Single Base Substitution C-T INTRON HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1506-S.SNP.1:40753029 chr01:040753029 0 W/40753029-40753029 FN1506-S Single Base Substitution A-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3971-S.SNP.1:40753260 chr01:040753260 0 W/40753260-40753260 FN3971-S SNP C -> T AC=2;AN=168;BQB=0.527069;DP=1961;DP4=882,1029,4,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000172968;MQSB=0.994228;RPB=0.928171;SGB=24.4556;VDB=0.89913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.1:40763175 chr01:040763175 0 W/40763175-40763175 FN1430-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g70360 serine palmitoyltransferase 2, putative, expressed SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2640-S.SNP.1:40765143 chr01:040765143 0 W/40765143-40765143 FN2640-S SNP C -> T AC=2;AN=200;BQB=0.98956;DP=5040;DP4=2570,2150,25,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.26039e-28;MQSB=0.977822;RPB=0.429339;SGB=173.661;VDB=0.251778;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.1:40765469 chr01:040765469 0 W/40765469-40765469 FN1366-S Single Base Substitution C-T INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2370.SNP.1:40766800 chr01:040766800 0 W/40766800-40766800 FN2370 SNP G -> T AC=1;AN=192;BQB=0.80051;DP=5174;DP4=2470,2456,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.53735e-06;MQSB=0.972619;RPB=0.462898;SGB=-14.7687;VDB=0.347589;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.1:40766934 chr01:040766934 0 W/40766934-40766934 FN959-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN-362.SNP.1:40771432 chr01:040771432 0 W/40771432-40771432 FN-362 Single Base Substitution G-T INTRON HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3394-S.SNP.1:40771438 chr01:040771438 0 W/40771438-40771438 FN3394-S SNP G -> T AC=1;AN=184;BQB=0.245807;DP=3571;DP4=2296,1102,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.05853e-05;MQSB=0.992754;RPB=0.263142;SGB=66.8296;VDB=0.454917;EFF=INTRON(MODIFIER||||497|LOC_Os01g70370|protein_coding|CODING|LOC_Os01g70370.1|1|1) FN-379.SNP.1:40772804 chr01:040772804 0 W/40772804-40772804 FN-379 Single Base Substitution T-A INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1240-S.SNP.1:40779391 chr01:040779391 0 W/40779391-40779391 FN1240-S Single Base Substitution C-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2424.SNP.1:40789438 chr01:040789438 0 W/40789438-40789438 FN2424 SNP G -> A AC=1;AN=200;BQB=0.508441;DP=4566;DP4=1990,2245,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05557e-13;MQSB=0.00409472;RPB=0.479692;SGB=109.527;VDB=0.460526;EFF=INTRON(MODIFIER||||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.1|2|1),INTRON(MODIFIER||||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.2|1|1),INTRON(MODIFIER||||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.3|2|1) FN955-S.SNP.1:40789897 chr01:040789897 0 W/40789897-40789897 FN955-S Single Base Substitution T-A INTRON HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN2629-S.SNP.1:40790404 chr01:040790404 0 W/40790404-40790404 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.309288;DP=5097;DP4=2520,2321,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.91398e-18;MQSB=0.962198;RPB=0.988471;SGB=58.1418;VDB=0.849066;EFF=UTR_5_PRIME(MODIFIER||1514||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.2|1|1),INTRON(MODIFIER||||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.3|1|1),INTRON(MODIFIER||||364|LOC_Os01g70410|protein_coding|CODING|LOC_Os01g70410.1|1|1) FN2323.SNP.1:40801271 chr01:040801271 0 W/40801271-40801271 FN2323 SNP G -> A AC=1;AN=192;BQB=0.21828;DP=4313;DP4=2020,1829,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.62777e-06;MQSB=0.112071;RPB=0.836567;SGB=-34.4565;VDB=0.656765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.1:40822220 chr01:040822220 0 W/40822220-40822220 FN2315 SNP C -> T AC=2;AN=192;BQB=0.672445;DP=5192;DP4=2366,2365,33,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.19635e-31;MQSB=0.738752;RPB=0.954122;SGB=-126.234;VDB=0.434191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:40830704 chr01:040830704 0 W/40830704-40830704 FN2096-S SNP T -> A AC=1;AN=168;BQB=0.314256;DP=2728;DP4=996,1654,5,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.19962e-07;MQSB=0.977924;RPB=0.995961;SGB=-168.619;VDB=0.0360188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:40830705 chr01:040830705 0 W/40830705-40830705 FN2096-S SNP C -> A AC=1;AN=168;BQB=0.998373;DP=2749;DP4=1009,1683,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97228e-10;MQSB=0.962466;RPB=0.467785;SGB=8.48315;VDB=0.0487835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:40830706 chr01:040830706 0 W/40830706-40830706 FN2096-S SNP C -> A AC=1;AN=168;BQB=0.974898;DP=2756;DP4=1009,1686,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.98291e-10;MQSB=0.982781;RPB=0.830047;SGB=8.48315;VDB=0.0681485;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.1:40831502 chr01:040831502 0 W/40831502-40831502 FN670-S Single Base Substitution G-A INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3383-S.SNP.1:40836174 chr01:040836174 0 W/40836174-40836174 FN3383-S SNP G -> T AC=1;AN=184;BQB=0.997774;DP=2920;DP4=1519,1284,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.35738e-13;MQSB=0.958409;RPB=0.0219289;SGB=84.9167;VDB=0.11101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.1:40836208 chr01:040836208 0 W/40836208-40836208 FN3383-S SNP C -> A AC=1;AN=184;BQB=0.59808;DP=2978;DP4=1599,1290,16,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98203e-16;MQSB=0.999701;RPB=0.117569;SGB=78.0093;VDB=0.0223529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.1:40848436 chr01:040848436 0 W/40848436-40848436 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.890509;DP=4975;DP4=2128,2559,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75644e-13;MQSB=0.998716;RPB=0.880239;SGB=20.7261;VDB=0.372583;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.1:40849178 chr01:040849178 0 W/40849178-40849178 FN3479-S SNP C -> G AC=1;AN=184;BQB=0.925715;DP=2978;DP4=1771,1108,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42271e-09;MQSB=0.934921;RPB=0.511153;SGB=57.786;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.1:40853364 chr01:040853364 0 W/40853364-40853364 FN2141-S SNP A -> T AC=2;AN=168;BQB=0.0499569;DP=2755;DP4=1061,1626,16,32;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0221416;MQB=6.20376e-09;MQSB=1.4013e-45;RPB=0.995613;SGB=-24.0173;VDB=0.873806;EFF=INTRON(MODIFIER||||1561|LOC_Os01g70540|protein_coding|CODING|LOC_Os01g70540.1|2|1) FN2141-S.SNP.1:40853365 chr01:040853365 0 W/40853365-40853365 FN2141-S SNP A -> T AC=2;AN=168;BQB=0.0977862;DP=2746;DP4=1071,1612,13,31;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0211216;MQB=3.71628e-10;MQSB=1.48538e-43;RPB=0.936959;SGB=-52.5961;VDB=0.871384;EFF=INTRON(MODIFIER||||1561|LOC_Os01g70540|protein_coding|CODING|LOC_Os01g70540.1|2|1) FN1573-S.SNP.1:40863736 chr01:040863736 0 W/40863736-40863736 FN1573-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g70560 expressed protein SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN904-S.SNP.1:40872185 chr01:040872185 0 W/40872185-40872185 FN904-S Single Base Substitution C-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1453-S.SNP.1:40873408 chr01:040873408 0 W/40873408-40873408 FN1453-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN-359.SNP.1:40876923 chr01:040876923 0 W/40876923-40876923 FN-359 Single Base Substitution T-G INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN3467-S.SNP.1:40882336 chr01:040882336 0 W/40882336-40882336 FN3467-S SNP A -> T AC=2;AN=184;BQB=0.570773;DP=2763;DP4=1337,1287,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.43333e-14;MQSB=0.994806;RPB=0.799294;SGB=106.184;VDB=0.788437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.1:40882386 chr01:040882386 0 W/40882386-40882386 FN2649-S SNP T -> A AC=1;AN=200;BQB=0.83519;DP=4923;DP4=2501,2171,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.36764e-18;MQSB=0.844527;RPB=0.40885;SGB=118.737;VDB=0.613277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.1:40882387 chr01:040882387 0 W/40882387-40882387 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.685454;DP=4926;DP4=2473,2145,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31265e-18;MQSB=0.880917;RPB=0.480037;SGB=90.7419;VDB=0.514643;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.1:40884064 chr01:040884064 0 W/40884064-40884064 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.877762;DP=4720;DP4=2396,2087,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.23568e-10;MQSB=0.863378;RPB=0.958717;SGB=63.4749;VDB=0.937409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.1:40893093 chr01:040893093 0 W/40893093-40893093 FN3838-S SNP C -> T AC=1;AN=190;BQB=0.716088;DP=2591;DP4=1408,1066,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03313e-06;MQSB=0.970984;RPB=0.80971;SGB=39.6545;VDB=0.12649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.1:40902005 chr01:040902005 0 W/40902005-40902005 FN2217-S SNP T -> A AC=2;AN=190;BQB=0.522541;DP=5149;DP4=2352,2511,22,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16033e-22;MQSB=0.924405;RPB=0.281772;SGB=172.05;VDB=0.228926;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.1:40905818 chr01:040905818 0 W/40905818-40905818 FN801-S Single Base Substitution C-T INTRON HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN2261-S.SNP.1:40906064 chr01:040906064 0 W/40906064-40906064 FN2261-S SNP A -> G AC=1;AN=190;BQB=0.87034;DP=4832;DP4=2227,2340,18,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.67249e-21;MQSB=0.920245;RPB=0.238381;SGB=176.604;VDB=0.142215;EFF=INTRON(MODIFIER||||748|LOC_Os01g70660|protein_coding|CODING|LOC_Os01g70660.1|3|1) FN782-S.SNP.1:40906064 chr01:040906064 0 W/40906064-40906064 FN782-S Single Base Substitution A-G INTRON HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. W385-6-8-4.SNP.1:40913772 chr01:040913772 0 W/40913772-40913772 W385-6-8-4 Single Base Substitution A-G INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN343-S.SNP.1:40924757 chr01:040924757 0 W/40924757-40924757 FN343-S Single Base Substitution A-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN-168.SNP.1:40927829 chr01:040927829 0 W/40927829-40927829 FN-168 Single Base Substitution C-T INTRON HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN3832-S.SNP.1:40928138 chr01:040928138 0 W/40928138-40928138 FN3832-S SNP C -> A AC=1;AN=190;BQB=0.999488;DP=2313;DP4=1216,951,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.00961e-05;MQSB=0.863915;RPB=0.134099;SGB=39.9877;VDB=0.0065755;EFF=INTRON(MODIFIER||||227|LOC_Os01g70700|protein_coding|CODING|LOC_Os01g70700.1|3|1) FN760-S.SNP.1:40928325 chr01:040928325 0 W/40928325-40928325 FN760-S Single Base Substitution T-C INTRON HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2587-S.SNP.1:40935786 chr01:040935786 0 W/40935786-40935786 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.934355;DP=4206;DP4=1701,2263,9,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.72206e-15;MQSB=0.917543;RPB=0.750577;SGB=52.7004;VDB=0.7429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.1:40936269 chr01:040936269 0 W/40936269-40936269 FN2215-S SNP A -> G AC=1;AN=190;BQB=0.617985;DP=5223;DP4=2251,2448,17,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.59969e-20;MQSB=0.961626;RPB=0.750103;SGB=38.2964;VDB=0.353089;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.1:40938758 chr01:040938758 0 W/40938758-40938758 FN4122-S SNP C -> T AC=2;AN=182;BQB=0.200878;DP=2981;DP4=1485,1406,17,16;HOB=0.0217365;ICB=0.494567;MQ=25;MQ0F=0.164039;MQB=0.239286;MQSB=8.8815e-33;RPB=0.282642;SGB=105.845;VDB=0.367869;EFF=UTR_3_PRIME(MODIFIER||396||102|LOC_Os01g70720|protein_coding|CODING|LOC_Os01g70720.1|3|1),UTR_3_PRIME(MODIFIER||396||102|LOC_Os01g70720|protein_coding|CODING|LOC_Os01g70720.2|4|1) FN1118-S.SNP.1:40941249 chr01:040941249 0 W/40941249-40941249 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1333-S.SNP.1:40957566 chr01:040957566 0 W/40957566-40957566 FN1333-S Single Base Substitution C-T INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN-304.SNP.1:40959654 chr01:040959654 0 W/40959654-40959654 FN-304 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g70760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1047-S.SNP.1:40960773 chr01:040960773 0 W/40960773-40960773 FN1047-S Single Base Substitution A-T INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN994-S.SNP.1:40960773 chr01:040960773 0 W/40960773-40960773 FN994-S Single Base Substitution A-T INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN-109.SNP.1:40962450 chr01:040962450 0 W/40962450-40962450 FN-109 Single Base Substitution G-A UTR_3_PRIME HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN3331-S.SNP.1:40962634 chr01:040962634 0 W/40962634-40962634 FN3331-S SNP C -> T AC=1;AN=184;BQB=0.165714;DP=3138;DP4=1759,1258,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42492e-05;MQSB=0.904968;RPB=0.989749;SGB=42.7914;VDB=0.875672;EFF=UTR_3_PRIME(MODIFIER||229||221|LOC_Os01g70770|protein_coding|CODING|LOC_Os01g70770.1|3|1) FN505-S.SNP.1:40964574 chr01:040964574 0 W/40964574-40964574 FN505-S Single Base Substitution T-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2627-S.SNP.1:40976593 chr01:040976593 0 W/40976593-40976593 FN2627-S SNP T -> C AC=1;AN=200;BQB=0.69388;DP=4803;DP4=2450,2148,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17241e-07;MQSB=0.999247;RPB=0.77498;SGB=47.4799;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.1:40979259 chr01:040979259 0 W/40979259-40979259 FN2213-S SNP A -> G AC=1;AN=190;BQB=0.873071;DP=4987;DP4=2490,2103,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1761e-06;MQSB=0.963113;RPB=0.936026;SGB=-0.550503;VDB=0.263711;EFF=INTRON(MODIFIER||||336|LOC_Os01g70800|protein_coding|CODING|LOC_Os01g70800.1|1|1),INTRON(MODIFIER||||334|LOC_Os01g70800|protein_coding|CODING|LOC_Os01g70800.2|1|1) FN-330.SNP.1:40982899 chr01:040982899 0 W/40982899-40982899 FN-330 Single Base Substitution C-T INTRON HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN4165-S.SNP.1:40984288 chr01:040984288 0 W/40984288-40984288 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.937791;DP=2657;DP4=1480,1044,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.41337e-09;MQSB=0.936499;RPB=0.801007;SGB=56.7575;VDB=0.968653;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.1:40990797 chr01:040990797 0 W/40990797-40990797 FN4072-S SNP C -> T AC=1;AN=182;BQB=0.975246;DP=3331;DP4=1645,1545,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.41974e-05;MQSB=0.995623;RPB=0.957577;SGB=30.5793;VDB=0.511899;EFF=INTRON(MODIFIER||||1168|LOC_Os01g70810|protein_coding|CODING|LOC_Os01g70810.1|11|1) FN-252.SNP.1:40996561 chr01:040996561 0 W/40996561-40996561 FN-252 Single Base Substitution T-C INTRON HOMO SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2455.SNP.1:40998261 chr01:040998261 0 W/40998261-40998261 FN2455 SNP G -> T AC=2;AN=200;BQB=0.999759;DP=3802;DP4=1524,1978,17,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.2586e-19;MQSB=0.906304;RPB=0.878942;SGB=108.768;VDB=0.398946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.1:41006656 chr01:041006656 0 W/41006656-41006656 FN2408 SNP G -> T AC=1;AN=200;BQB=0.125688;DP=4876;DP4=2391,2255,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.6676e-09;MQSB=0.993244;RPB=0.184645;SGB=32.0901;VDB=0.339003;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.1:41008781 chr01:041008781 0 W/41008781-41008781 FN-363 Single Base Substitution C-A INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN3823-S.SNP.1:41011433 chr01:041011433 0 W/41011433-41011433 FN3823-S SNP G -> C AC=1;AN=190;BQB=0.995046;DP=2865;DP4=1344,1342,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.90961e-09;MQSB=0.205892;RPB=0.49039;SGB=76.4186;VDB=0.129778;EFF=UTR_3_PRIME(MODIFIER||96||476|LOC_Os01g70870|protein_coding|CODING|LOC_Os01g70870.1|3|1) FN1666-S.SNP.1:41013360 chr01:041013360 0 W/41013360-41013360 FN1666-S SNP C -> T AC=1;AN=188;BQB=0.0275012;DP=3451;DP4=2421,974,22,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87333e-09;MQSB=0.952469;RPB=0.181911;SGB=-72.0994;VDB=0.12703;EFF=INTRON(MODIFIER||||476|LOC_Os01g70870|protein_coding|CODING|LOC_Os01g70870.1|1|1) FN2551-S.SNP.1:41015946 chr01:041015946 0 W/41015946-41015946 FN2551-S SNP A -> G AC=1;AN=198;BQB=0.974132;DP=4375;DP4=2076,2087,20,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.19191e-16;MQSB=0.986406;RPB=0.990126;SGB=60.4858;VDB=0.320516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.1:41016490 chr01:041016490 0 W/41016490-41016490 FN2550-S SNP C -> G AC=2;AN=198;BQB=0.854098;DP=4288;DP4=2295,1778,8,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.04944e-10;MQSB=0.981076;RPB=0.99931;SGB=63.3342;VDB=0.936522;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.1:41027212 chr01:041027212 0 W/41027212-41027212 FN955-S Single Base Substitution C-A INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-336.SNP.1:41038070 chr01:041038070 0 W/41038070-41038070 FN-336 Single Base Substitution A-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2622-S.SNP.1:41039171 chr01:041039171 0 W/41039171-41039171 FN2622-S SNP T -> G AC=1;AN=200;BQB=0.424244;DP=4590;DP4=2305,2052,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1055e-18;MQSB=0.997669;RPB=0.716373;SGB=90.7419;VDB=0.697511;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.1:41040938 chr01:041040938 0 W/41040938-41040938 FN-232 Single Base Substitution T-A INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1278-S.SNP.1:41043808 chr01:041043808 0 W/41043808-41043808 FN1278-S Single Base Substitution G-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN516-S.SNP.1:41045097 chr01:041045097 0 W/41045097-41045097 FN516-S Single Base Substitution G-A INTERGENIC HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN516-S.SNP.1:41045098 chr01:041045098 0 W/41045098-41045098 FN516-S Single Base Substitution T-A INTERGENIC HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN1176-S.SNP.1:41049576 chr01:041049576 0 W/41049576-41049576 FN1176-S Single Base Substitution C-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-107.SNP.1:41049796 chr01:041049796 0 W/41049796-41049796 FN-107 Single Base Substitution A-G INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-151.SNP.1:41050048 chr01:041050048 0 W/41050048-41050048 FN-151 Single Base Substitution C-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2435.SNP.1:41056176 chr01:041056176 0 W/41056176-41056176 FN2435 SNP A -> T AC=1;AN=200;BQB=0.617096;DP=4990;DP4=2370,2270,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22926e-14;MQSB=0.900719;RPB=0.975204;SGB=79.9264;VDB=0.704864;EFF=UTR_3_PRIME(MODIFIER||218||301|LOC_Os01g70920|protein_coding|CODING|LOC_Os01g70920.1|10|1),UTR_3_PRIME(MODIFIER||218||300|LOC_Os01g70920|protein_coding|CODING|LOC_Os01g70920.2|9|1),UTR_3_PRIME(MODIFIER||218||238|LOC_Os01g70920|protein_coding|CODING|LOC_Os01g70920.3|8|1) FN2317.SNP.1:41060836 chr01:041060836 0 W/41060836-41060836 FN2317 SNP C -> T AC=1;AN=192;BQB=0.77344;DP=4434;DP4=2087,2093,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00022553;MQB=2.70195e-11;MQSB=0.821015;RPB=0.128447;SGB=46.8644;VDB=0.135148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.1:41061511 chr01:041061511 0 W/41061511-41061511 FN1261-S Single Base Substitution T-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-102.SNP.1:41072801 chr01:041072801 0 W/41072801-41072801 FN-102 Single Base Substitution A-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN4080-S.SNP.1:41086899 chr01:041086899 0 W/41086899-41086899 FN4080-S SNP G -> A AC=2;AN=182;BQB=0.983206;DP=2945;DP4=1354,1492,9,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.46671e-15;MQSB=0.982812;RPB=0.973215;SGB=102.753;VDB=0.626441;EFF=INTRON(MODIFIER||||211|LOC_Os01g70980|protein_coding|CODING|LOC_Os01g70980.1|1|1) FN2645-S.SNP.1:41094868 chr01:041094868 0 W/41094868-41094868 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.924768;DP=4858;DP4=2594,1963,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.72764e-12;MQSB=0.999334;RPB=0.962575;SGB=95.7111;VDB=0.0144087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.1:41105053 chr01:041105053 0 W/41105053-41105053 FN2559-S SNP A -> C AC=1;AN=198;BQB=0.440659;DP=4380;DP4=2351,1792,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00038044;MQSB=0.969225;RPB=0.993476;SGB=29.3637;VDB=0.771728;EFF=UTR_5_PRIME(MODIFIER||346||346|LOC_Os01g71010|protein_coding|CODING|LOC_Os01g71010.1|1|1),UTR_5_PRIME(MODIFIER||346||194|LOC_Os01g71010|protein_coding|CODING|LOC_Os01g71010.2|1|1) FN570-S.SNP.1:41106365 chr01:041106365 0 W/41106365-41106365 FN570-S Single Base Substitution G-A INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3466-S.SNP.1:41106503 chr01:041106503 0 W/41106503-41106503 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.97837;DP=3828;DP4=1936,1787,15,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22549e-11;MQSB=0.994275;RPB=0.893302;SGB=89.4385;VDB=0.234863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.1:41117889 chr01:041117889 0 W/41117889-41117889 FN1075-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g71050 MSP domain containing protein, putative, expressed SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1009-S.SNP.1:41124404 chr01:041124404 0 W/41124404-41124404 FN1009-S Single Base Substitution A-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN_786-4-1.SNP.1:41128822 chr01:041128822 0 W/41128822-41128822 FN_786-4-1 Single Base Substitution G-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-279.SNP.1:41129440 chr01:041129440 0 W/41129440-41129440 FN-279 Single Base Substitution C-T INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4133-S.SNP.1:41131294 chr01:041131294 0 W/41131294-41131294 FN4133-S SNP A -> C AC=2;AN=182;BQB=0.98611;DP=3466;DP4=1832,1524,16,13;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00490479;MQB=1.24882e-15;MQSB=0.960412;RPB=0.996213;SGB=125.307;VDB=0.370149;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.1:41131838 chr01:041131838 0 W/41131838-41131838 FN868-S Single Base Substitution G-T INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1540-S.SNP.1:41132865 chr01:041132865 0 W/41132865-41132865 FN1540-S Single Base Substitution G-T INTERGENIC Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN-71.SNP.1:41136975 chr01:041136975 0 W/41136975-41136975 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3536-S.SNP.1:41140904 chr01:041140904 0 W/41140904-41140904 FN3536-S SNP A -> G AC=1;AN=188;BQB=0.592885;DP=3784;DP4=2045,1610,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.48685e-06;MQSB=0.99972;RPB=0.978092;SGB=43.0708;VDB=0.834499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.1:41141646 chr01:041141646 0 W/41141646-41141646 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.867309;DP=5700;DP4=3077,2331,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.06292e-14;MQSB=0.860061;RPB=0.473171;SGB=95.7111;VDB=0.319433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.1:41143977 chr01:041143977 0 W/41143977-41143977 FN-227 Single Base Substitution G-A INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN3324-S.SNP.1:41146087 chr01:041146087 0 W/41146087-41146087 FN3324-S SNP G -> A AC=1;AN=184;BQB=0.570176;DP=3974;DP4=1760,2091,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54817e-07;MQSB=0.99897;RPB=0.801869;SGB=18.2315;VDB=0.706775;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V195|402|LOC_Os01g71094|protein_coding|CODING|LOC_Os01g71094.1|1|1) W427-1-1.SNP.1:41155301 chr01:041155301 0 W/41155301-41155301 W427-1-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-281.SNP.1:41157499 chr01:041157499 0 W/41157499-41157499 FN-281 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os01g71106 NBS-LRR disease resistance protein, putative, expressed SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. W463-2-1.SNP.1:41165769 chr01:041165769 0 W/41165769-41165769 W463-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1073-S.SNP.1:41165845 chr01:041165845 0 W/41165845-41165845 FN1073-S Single Base Substitution G-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN768-S.SNP.1:41168764 chr01:041168764 0 W/41168764-41168764 FN768-S Single Base Substitution A-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2715-S.SNP.1:41169498 chr01:041169498 0 W/41169498-41169498 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.978657;DP=4678;DP4=2227,2220,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15682e-12;MQSB=0.993812;RPB=0.628568;SGB=65.5058;VDB=0.231566;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.1:41173373 chr01:041173373 0 W/41173373-41173373 FN1158-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3308-S.SNP.1:41173841 chr01:041173841 0 W/41173841-41173841 FN3308-S SNP G -> A AC=1;AN=184;BQB=0.60518;DP=3051;DP4=1598,1328,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.09599e-10;MQSB=0.960128;RPB=0.971282;SGB=25.7969;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.1:41174154 chr01:041174154 0 W/41174154-41174154 FN2421 SNP G -> A AC=1;AN=200;BQB=0.380329;DP=4448;DP4=2102,2112,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00022482;MQB=9.9085e-11;MQSB=0.99224;RPB=0.73041;SGB=34.6953;VDB=0.638992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.1:41178235 chr01:041178235 0 W/41178235-41178235 FN1610-S Single Base Substitution T-C INTERGENIC Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN845-S.SNP.1:41182089 chr01:041182089 0 W/41182089-41182089 FN845-S Single Base Substitution C-A INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN_776-5-1.SNP.1:41188545 chr01:041188545 0 W/41188545-41188545 FN_776-5-1 Single Base Substitution C-A HET LOC_Os01g71190 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN792-S.SNP.1:41189752 chr01:041189752 0 W/41189752-41189752 FN792-S Single Base Substitution C-T INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2754-S.SNP.1:41190065 chr01:041190065 0 W/41190065-41190065 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.981209;DP=4838;DP4=2286,2343,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.40003e-12;MQSB=0.998303;RPB=0.148618;SGB=58.2954;VDB=0.350238;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.1:41199212 chr01:041199212 0 W/41199212-41199212 FN-115 Single Base Substitution T-A INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN690-S.SNP.1:41205553 chr01:041205553 0 W/41205553-41205553 FN690-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os01g71220 zinc finger protein, putative, expressed SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN711-S.SNP.1:41206915 chr01:041206915 0 W/41206915-41206915 FN711-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g71220 zinc finger protein, putative, expressed SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN_N1-151-7.SNP.1:41212755 chr01:041212755 0 W/41212755-41212755 FN_N1-151-7 Single Base Substitution T-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN3990-S.SNP.1:41218005 chr01:041218005 0 W/41218005-41218005 FN3990-S SNP T -> C AC=1;AN=168;BQB=0.994362;DP=2721;DP4=1381,1034,11,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.85257e-14;MQSB=0.692204;RPB=0.0268326;SGB=-80.6216;VDB=0.0484751;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.1:41219356 chr01:041219356 0 W/41219356-41219356 FN3417-S SNP A -> T AC=2;AN=184;BQB=0.999974;DP=2662;DP4=1372,1193,17,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.73934e-15;MQSB=0.983102;RPB=0.99915;SGB=112.047;VDB=0.834635;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.1:41220335 chr01:041220335 0 W/41220335-41220335 FN417-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1406-S.SNP.1:41226515 chr01:041226515 0 W/41226515-41226515 FN1406-S Single Base Substitution A-T INTRON Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3373-S.SNP.1:41239313 chr01:041239313 0 W/41239313-41239313 FN3373-S SNP T -> A AC=1;AN=184;BQB=0.921469;DP=2394;DP4=1250,1040,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.76621e-05;MQSB=1.16361e-07;RPB=0.0827578;SGB=25.1826;VDB=0.034899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.1:41251990 chr01:041251990 0 W/41251990-41251990 FN2609-S SNP T -> C AC=1;AN=198;BQB=0.634506;DP=4253;DP4=2153,1818,21,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.13252e-19;MQSB=0.999391;RPB=0.212415;SGB=115.647;VDB=0.0295267;EFF=INTRON(MODIFIER||||292|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.1|2|1),INTRON(MODIFIER||||244|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.2|1|1),INTRON(MODIFIER||||125|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.3|2|1) FN2123-S.SNP.1:41258970 chr01:041258970 0 W/41258970-41258970 FN2123-S SNP G -> C AC=1;AN=168;BQB=0.0495433;DP=4347;DP4=2132,2171,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09459e-12;MQSB=0.996777;RPB=0.847999;SGB=-82.1908;VDB=0.313328;EFF=INTRON(MODIFIER||||125|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.3|3|1),INTRON(MODIFIER||||292|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.1|3|1),INTRON(MODIFIER||||244|LOC_Os01g71300|protein_coding|CODING|LOC_Os01g71300.2|2|1) FN735-S.SNP.1:41259144 chr01:041259144 0 W/41259144-41259144 FN735-S Single Base Substitution T-A INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN_543-2-6.SNP.1:41260489 chr01:041260489 0 W/41260489-41260489 FN_543-2-6 Single Base Substitution G-A Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3976-S.SNP.1:41275707 chr01:041275707 0 W/41275707-41275707 FN3976-S SNP C -> T AC=1;AN=168;BQB=0.981776;DP=2497;DP4=1082,1308,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.41657e-07;MQSB=0.843896;RPB=0.929285;SGB=52.1728;VDB=0.633147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.1:41283106 chr01:041283106 0 W/41283106-41283106 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.498708;DP=2766;DP4=993,1575,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000102014;MQSB=1.01622e-22;RPB=0.957277;SGB=36.1006;VDB=0.166362;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.1:41286505 chr01:041286505 0 W/41286505-41286505 FN790-S Single Base Substitution T-A INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3627-S.SNP.1:41288603 chr01:041288603 0 W/41288603-41288603 FN3627-S SNP A -> G AC=2;AN=190;BQB=0.917032;DP=2915;DP4=1407,1367,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.92747e-16;MQSB=0.989436;RPB=0.901637;SGB=126.511;VDB=0.249483;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.1:41289207 chr01:041289207 0 W/41289207-41289207 FN351-S Single Base Substitution C-T INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.1:41289208 chr01:041289208 0 W/41289208-41289208 FN351-S Single Base Substitution C-T INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN3383-S.SNP.1:41294923 chr01:041294923 0 W/41294923-41294923 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.499123;DP=2905;DP4=1510,1287,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.92122e-14;MQSB=0.983814;RPB=0.731128;SGB=93.9603;VDB=0.465576;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.1:41294924 chr01:041294924 0 W/41294924-41294924 FN3383-S SNP A -> T AC=1;AN=184;BQB=0.58432;DP=2930;DP4=1526,1308,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.7256e-13;MQSB=0.972067;RPB=0.895012;SGB=45.9712;VDB=0.637103;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.1:41296455 chr01:041296455 0 W/41296455-41296455 FN1261-S Single Base Substitution A-G INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3541-S.SNP.1:41299332 chr01:041299332 0 W/41299332-41299332 FN3541-S SNP C -> T AC=1;AN=188;BQB=0.954905;DP=2673;DP4=1241,1371,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18423e-06;MQSB=0.971533;RPB=0.961152;SGB=35.3493;VDB=0.892739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.1:41310523 chr01:041310523 0 W/41310523-41310523 FN2533-S SNP G -> C AC=1;AN=198;BQB=0.999898;DP=3901;DP4=1888,1786,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.97861e-07;MQSB=0.0586567;RPB=0.278919;SGB=32.9588;VDB=0.441617;EFF=INTRON(MODIFIER||||500|LOC_Os01g71320|protein_coding|CODING|LOC_Os01g71320.1|3|1) FN1750-S.SNP.1:41312718 chr01:041312718 0 W/41312718-41312718 FN1750-S SNP C -> G AC=1;AN=188;BQB=0.0169206;DP=3264;DP4=1392,1798,21,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24714e-06;MQSB=0.948876;RPB=0.634427;SGB=-242.703;VDB=0.162248;EFF=INTRON(MODIFIER||||500|LOC_Os01g71320|protein_coding|CODING|LOC_Os01g71320.1|1|1) FN2597-S.SNP.1:41315762 chr01:041315762 0 W/41315762-41315762 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.974251;DP=4159;DP4=1843,2108,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.92777e-13;MQSB=0.976119;RPB=0.272423;SGB=42.3199;VDB=0.718503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.1:41317043 chr01:041317043 0 W/41317043-41317043 FN1532-S Single Base Substitution G-C INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2102-S.SNP.1:41320465 chr01:041320465 0 W/41320465-41320465 FN2102-S SNP T -> A AC=2;AN=168;BQB=0.933298;DP=3811;DP4=1848,1904,27,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.29374e-19;MQSB=0.997612;RPB=0.703215;SGB=-52.5961;VDB=0.201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.1:41323697 chr01:041323697 0 W/41323697-41323697 FN2321 SNP C -> T AC=2;AN=192;BQB=0.924091;DP=4764;DP4=1753,2614,27,40;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000209908;MQB=8.86084e-33;MQSB=0.00715806;RPB=0.943425;SGB=-200.664;VDB=0.152314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.1:41325450 chr01:041325450 0 W/41325450-41325450 FN4189-S SNP T -> C AC=1;AN=170;BQB=0.880435;DP=2204;DP4=989,1099,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.08572e-05;MQSB=0.94348;RPB=0.964518;SGB=14.9986;VDB=0.645013;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.1:41326493 chr01:041326493 0 W/41326493-41326493 FN1297-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1297-S.SNP.1:41326496 chr01:041326496 0 W/41326496-41326496 FN1297-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2629-S.SNP.1:41326526 chr01:041326526 0 W/41326526-41326526 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.947368;DP=5097;DP4=2646,2159,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2491e-18;MQSB=0.877818;RPB=0.90319;SGB=146.368;VDB=0.429836;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.1:41328343 chr01:041328343 0 W/41328343-41328343 FN3285-S SNP C -> A AC=1;AN=184;BQB=0.805264;DP=2496;DP4=1153,1154,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.18723e-07;MQSB=0.49184;RPB=0.965479;SGB=44.2207;VDB=0.927044;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.1:41329004 chr01:041329004 0 W/41329004-41329004 FN685-S Single Base Substitution A-G INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2257-S.SNP.1:41336848 chr01:041336848 0 W/41336848-41336848 FN2257-S SNP A -> G AC=2;AN=190;BQB=0.197704;DP=2603;DP4=1054,798,23,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.06763e-15;MQSB=3.61057e-05;RPB=0.192421;SGB=28.4337;VDB=0.0811725;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.1:41337168 chr01:041337168 0 W/41337168-41337168 FN4249-S SNP A -> G AC=1;AN=170;BQB=0.710971;DP=2388;DP4=1270,999,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.21859e-08;MQSB=0.991273;RPB=0.999254;SGB=19.8839;VDB=0.484306;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.1:41338091 chr01:041338091 0 W/41338091-41338091 FN479-S Single Base Substitution G-T INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN_777-2-1.SNP.1:41352898 chr01:041352898 0 W/41352898-41352898 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN468-S.SNP.1:41357014 chr01:041357014 0 W/41357014-41357014 FN468-S Single Base Substitution C-T INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1025-S.SNP.1:41357271 chr01:041357271 0 W/41357271-41357271 FN1025-S Single Base Substitution G-A INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2354.SNP.1:41359580 chr01:041359580 0 W/41359580-41359580 FN2354 SNP C -> A AC=2;AN=192;BQB=0.82806;DP=5379;DP4=2252,2705,26,22;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.0131995;MQB=6.05207e-10;MQSB=0.532093;RPB=0.581212;SGB=55.8496;VDB=0.707158;EFF=INTERGENIC(MODIFIER||||||||||1) FN515-S.SNP.1:41360193 chr01:041360193 0 W/41360193-41360193 FN515-S Single Base Substitution C-A INTERGENIC HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN2449.SNP.1:41364186 chr01:041364186 0 W/41364186-41364186 FN2449 SNP C -> G AC=2;AN=200;BQB=0.787673;DP=4136;DP4=2185,1593,26,9;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00507737;MQB=0.0174987;MQSB=0.191813;RPB=0.545251;SGB=36.7778;VDB=0.154361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.1:41372828 chr01:041372828 0 W/41372828-41372828 FN2302 SNP C -> A AC=2;AN=192;BQB=0.993877;DP=5383;DP4=2778,2188,38,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.12297e-34;MQSB=0.437991;RPB=0.302108;SGB=12.8844;VDB=0.878156;EFF=INTERGENIC(MODIFIER||||||||||1) FN853-S.SNP.1:41375402 chr01:041375402 0 W/41375402-41375402 FN853-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os01g71410 glycosyl hydrolases family 17, putative, expressed SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN1012-S.SNP.1:41379019 chr01:041379019 0 W/41379019-41379019 FN1012-S Single Base Substitution C-T INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN494-S.SNP.1:41385197 chr01:041385197 0 W/41385197-41385197 FN494-S Single Base Substitution C-T INTRON HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN3880-S.SNP.1:41387482 chr01:041387482 0 W/41387482-41387482 FN3880-S SNP G -> A AC=1;AN=158;BQB=0.565565;DP=2182;DP4=1045,1032,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=1.19292e-05;MQSB=3.7615e-06;RPB=0.864501;SGB=44.1818;VDB=0.383344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.1:41392333 chr01:041392333 0 W/41392333-41392333 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.990251;DP=3471;DP4=1591,1753,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.96345e-07;MQSB=0.961671;RPB=0.157174;SGB=32.2261;VDB=0.69024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.1:41397136 chr01:041397136 0 W/41397136-41397136 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.228818;DP=4689;DP4=2197,2276,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03928e-06;MQSB=0.983844;RPB=0.072539;SGB=29.4849;VDB=0.637622;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.1:41402552 chr01:041402552 0 W/41402552-41402552 FN521-S Single Base Substitution T-C INTERGENIC HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3326-S.SNP.1:41405156 chr01:041405156 0 W/41405156-41405156 FN3326-S SNP C -> A AC=1;AN=184;BQB=0.135616;DP=3714;DP4=1510,1836,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.458535;MQB=0.339003;MQSB=0;RPB=0.10256;SGB=-11.5833;VDB=0.459194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.1:41438042 chr01:041438042 0 W/41438042-41438042 FN2439 SNP A -> G AC=2;AN=200;BQB=0.886796;DP=5095;DP4=2574,2310,12,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000588813;MQB=4.66653e-13;MQSB=2.30087e-05;RPB=0.754387;SGB=101.557;VDB=0.561836;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.1:41459489 chr01:041459489 0 W/41459489-41459489 FN1115-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2312.SNP.1:41469129 chr01:041469129 0 W/41469129-41469129 FN2312 SNP T -> A AC=2;AN=192;BQB=0.893125;DP=5236;DP4=2302,2220,26,28;HOB=0.0206163;ICB=0.494846;MQ=34;MQ0F=0.113063;MQB=0.675962;MQSB=0.000283314;RPB=0.591813;SGB=-169.001;VDB=0.0790401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.1:41497065 chr01:041497065 0 W/41497065-41497065 FN1409-S Single Base Substitution T-C INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-102.SNP.1:41506063 chr01:041506063 0 W/41506063-41506063 FN-102 Single Base Substitution T-G INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2692-S.SNP.1:41506225 chr01:041506225 0 W/41506225-41506225 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.55137;DP=4783;DP4=2228,2301,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.77805e-15;MQSB=0.947662;RPB=0.713697;SGB=100.316;VDB=0.577398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.1:41509428 chr01:041509428 0 W/41509428-41509428 FN3842-S SNP G -> A AC=1;AN=190;BQB=0.969364;DP=2437;DP4=1254,1114,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.71795e-05;MQSB=0.00544976;RPB=0.104551;SGB=39.9877;VDB=0.228339;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.1:41514197 chr01:041514197 0 W/41514197-41514197 FN_N1-169-1 Single Base Substitution C-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2169-S.SNP.1:41516995 chr01:041516995 0 W/41516995-41516995 FN2169-S SNP G -> T AC=1;AN=168;BQB=0.992375;DP=3405;DP4=1587,1785,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.63429e-06;MQSB=0.959731;RPB=0.572634;SGB=14.8923;VDB=0.180121;EFF=INTRON(MODIFIER||||431|LOC_Os01g71630|protein_coding|CODING|LOC_Os01g71630.1|3|1),INTRON(MODIFIER||||431|LOC_Os01g71630|protein_coding|CODING|LOC_Os01g71630.2|3|1),INTRON(MODIFIER||||431|LOC_Os01g71630|protein_coding|CODING|LOC_Os01g71630.4|3|1) FN1014-S.SNP.1:41522719 chr01:041522719 0 W/41522719-41522719 FN1014-S Single Base Substitution A-G INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2628-S.SNP.1:41526416 chr01:041526416 0 W/41526416-41526416 FN2628-S SNP T -> C AC=1;AN=200;BQB=0.781523;DP=4781;DP4=2076,2541,8,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000418323;MQB=2.3276e-11;MQSB=0.00315373;RPB=0.897202;SGB=87.1368;VDB=0.317812;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:41526460 chr01:041526460 0 W/41526460-41526460 FN2096-S SNP G -> A AC=1;AN=168;BQB=0.66264;DP=2784;DP4=1513,1232,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.861e-07;MQSB=0.0171075;RPB=0.451083;SGB=-66.4989;VDB=0.265997;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.1:41526720 chr01:041526720 0 W/41526720-41526720 FN959-S Single Base Substitution C-T INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN836-S.SNP.1:41529439 chr01:041529439 0 W/41529439-41529439 FN836-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W470-2-1.SNP.1:41534780 chr01:041534780 0 W/41534780-41534780 W470-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2312.SNP.1:41553853 chr01:041553853 0 W/41553853-41553853 FN2312 SNP C -> T AC=2;AN=192;BQB=0.100436;DP=5297;DP4=2235,2647,28,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.76401e-23;MQSB=0.984003;RPB=0.845972;SGB=-109.006;VDB=0.611601;EFF=INTRON(MODIFIER||||362|LOC_Os01g71710|protein_coding|CODING|LOC_Os01g71710.1|2|1) FN-304.SNP.1:41558553 chr01:041558553 0 W/41558553-41558553 FN-304 Single Base Substitution T-G INTRON HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN926-S.SNP.1:41564993 chr01:041564993 0 W/41564993-41564993 FN926-S Single Base Substitution A-T INTRON HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2096-S.SNP.1:41567003 chr01:041567003 0 W/41567003-41567003 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.366725;DP=3458;DP4=1581,1842,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.96398e-10;MQSB=0.931989;RPB=0.00955266;SGB=58.7637;VDB=0.10495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.1:41567004 chr01:041567004 0 W/41567004-41567004 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.0036886;DP=3458;DP4=1571,1842,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.72053e-07;MQSB=0.943847;RPB=0.0403042;SGB=-103.201;VDB=0.729448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.1:41568831 chr01:041568831 0 W/41568831-41568831 FN2274-S SNP G -> T AC=1;AN=190;BQB=0.577897;DP=4635;DP4=2220,2029,16,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69313e-17;MQSB=0.437276;RPB=0.985925;SGB=74.7373;VDB=0.862313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.1:41588787 chr01:041588787 0 W/41588787-41588787 FN3508-S SNP A -> C AC=1;AN=188;BQB=0.970569;DP=4127;DP4=1738,2233,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00411922;MQB=2.73798e-09;MQSB=0.459938;RPB=0.488432;SGB=74.9605;VDB=0.121327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.1:41589026 chr01:041589026 0 W/41589026-41589026 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.311911;DP=3538;DP4=1641,1673,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0155455;MQB=0.00796731;MQSB=0.249516;RPB=0.359645;SGB=18.5788;VDB=0.137457;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.1:41589703 chr01:041589703 0 W/41589703-41589703 FN1764-S SNP C -> T AC=1;AN=188;BQB=0.107547;DP=3016;DP4=1871,1077,39,13;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.160477;MQB=5.56379e-05;MQSB=0;RPB=0.432463;SGB=-734.505;VDB=0.561017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.1:41601404 chr01:041601404 0 W/41601404-41601404 FN3928-S SNP A -> G AC=2;AN=158;BQB=0.999308;DP=2515;DP4=1549,803,18,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000397614;MQB=1.91894e-15;MQSB=0.674407;RPB=0.320388;SGB=52.2521;VDB=0.232829;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.1:41612971 chr01:041612971 0 W/41612971-41612971 FN883-S Single Base Substitution C-T INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2182-S.SNP.1:41625292 chr01:041625292 0 W/41625292-41625292 FN2182-S SNP A -> T AC=1;AN=190;BQB=0.938518;DP=8323;DP4=3490,4404,12,27;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.112339;MQB=0.00212653;MQSB=0;RPB=0.546067;SGB=128.501;VDB=0.0513724;EFF=INTRON(MODIFIER||||1060|LOC_Os01g71850|protein_coding|CODING|LOC_Os01g71850.1|5|1) FN861-S.SNP.1:41638185 chr01:041638185 0 W/41638185-41638185 FN861-S Single Base Substitution C-T INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN-380.SNP.1:41638570 chr01:041638570 0 W/41638570-41638570 FN-380 Single Base Substitution C-G INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN952-S.SNP.1:41638733 chr01:041638733 0 W/41638733-41638733 FN952-S Single Base Substitution A-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN952-S.SNP.1:41638735 chr01:041638735 0 W/41638735-41638735 FN952-S Single Base Substitution A-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2791-S.SNP.1:41639394 chr01:041639394 0 W/41639394-41639394 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.94509;DP=3859;DP4=1912,1753,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.0393884;MQB=0.989738;MQSB=0;RPB=0.949197;SGB=-10.8602;VDB=0.365778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.1:41644748 chr01:041644748 0 W/41644748-41644748 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.942058;DP=4391;DP4=1863,2285,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.83618e-16;MQSB=0.995099;RPB=0.792561;SGB=118.737;VDB=0.346198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.1:41650304 chr01:041650304 0 W/41650304-41650304 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2311.SNP.1:41661178 chr01:041661178 0 W/41661178-41661178 FN2311 SNP A -> C AC=1;AN=192;BQB=0.324796;DP=4542;DP4=2133,1844,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.10807e-12;MQSB=0.456451;RPB=0.359762;SGB=-39.6843;VDB=0.286464;EFF=INTRON(MODIFIER||||572|LOC_Os01g71900|protein_coding|CODING|LOC_Os01g71900.1|1|1) FN3877-S.SNP.1:41666755 chr01:041666755 0 W/41666755-41666755 FN3877-S SNP G -> A AC=2;AN=158;BQB=0.810657;DP=2361;DP4=990,1209,47,48;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00974164;MQB=0;MQSB=0.922194;RPB=5.9188e-08;SGB=-1203.54;VDB=8.88901e-14;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V318I|885|LOC_Os01g71910|protein_coding|CODING|LOC_Os01g71910.1|2|1) FN3433-S.SNP.1:41673418 chr01:041673418 0 W/41673418-41673418 FN3433-S SNP G -> A AC=1;AN=184;BQB=0.994894;DP=3682;DP4=1893,1688,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00135796;MQB=1.50871e-05;MQSB=0.250726;RPB=0.18005;SGB=28.7043;VDB=0.0574444;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.1:41675745 chr01:041675745 0 W/41675745-41675745 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN1012-S.SNP.1:41687767 chr01:041687767 0 W/41687767-41687767 FN1012-S Single Base Substitution G-A INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN549-S.SNP.1:41703364 chr01:041703364 0 W/41703364-41703364 FN549-S Single Base Substitution C-T INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN3667-S.SNP.1:41705787 chr01:041705787 0 W/41705787-41705787 FN3667-S SNP C -> A AC=1;AN=190;BQB=0.995;DP=2956;DP4=1409,1446,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17813e-08;MQSB=0.996197;RPB=0.75558;SGB=43.2083;VDB=0.554146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.1:41714113 chr01:041714113 0 W/41714113-41714113 FN3905-S SNP T -> G AC=2;AN=158;BQB=0.953981;DP=2081;DP4=1124,833,14,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.33356e-13;MQSB=0.205891;RPB=0.972203;SGB=81.2457;VDB=0.674949;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.1:41722177 chr01:041722177 0 W/41722177-41722177 FN943-S Single Base Substitution G-C INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN3378-S.SNP.1:41724814 chr01:041724814 0 W/41724814-41724814 FN3378-S SNP G -> C AC=2;AN=184;BQB=0.991414;DP=2893;DP4=1504,1278,17,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19408e-15;MQSB=0.999915;RPB=0.977935;SGB=125.613;VDB=0.865307;EFF=INTRON(MODIFIER||||672|LOC_Os01g72000|protein_coding|CODING|LOC_Os01g72000.1|2|1) FN620-S.SNP.1:41727195 chr01:041727195 0 W/41727195-41727195 FN620-S Single Base Substitution C-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2274-S.SNP.1:41728049 chr01:041728049 0 W/41728049-41728049 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.911968;DP=4076;DP4=1719,1945,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37114e-11;MQSB=0.0011524;RPB=0.945075;SGB=36.4291;VDB=0.427788;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.1:41739187 chr01:041739187 0 W/41739187-41739187 FN669-S Single Base Substitution A-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-336.SNP.1:41744978 chr01:041744978 0 W/41744978-41744978 FN-336 Single Base Substitution C-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN1069-S.SNP.1:41746721 chr01:041746721 0 W/41746721-41746721 FN1069-S Single Base Substitution G-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN624-S.SNP.1:41746755 chr01:041746755 0 W/41746755-41746755 FN624-S Single Base Substitution T-G INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2709-S.SNP.1:41752625 chr01:041752625 0 W/41752625-41752625 FN2709-S SNP T -> A AC=1;AN=200;BQB=0.999331;DP=4633;DP4=2288,2052,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.06922e-14;MQSB=0.00625227;RPB=0.720928;SGB=52.9314;VDB=0.456262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.1:41752633 chr01:041752633 0 W/41752633-41752633 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.923997;DP=4564;DP4=2207,2003,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.67522e-17;MQSB=0.00985897;RPB=0.944915;SGB=-6.45336;VDB=0.196638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.1:41752963 chr01:041752963 0 W/41752963-41752963 FN3725-S SNP T -> G AC=1;AN=190;BQB=0.932389;DP=1679;DP4=336,1249,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.20131;MQB=0.972042;MQSB=0;RPB=0.396415;SGB=49.0954;VDB=0.00540679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.1:41757539 chr01:041757539 0 W/41757539-41757539 FN2582-S SNP C -> G AC=1;AN=198;BQB=0.951205;DP=3045;DP4=1312,1587,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.308046;MQB=0.799063;MQSB=0;RPB=0.990956;SGB=22.1736;VDB=0.416561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.1:41769986 chr01:041769986 0 W/41769986-41769986 FN1471-S SNP G -> A AC=1;AN=188;BQB=0.676917;DP=3353;DP4=1813,1488,12,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.39074e-13;MQSB=0.994394;RPB=0.976583;SGB=-8.48022;VDB=0.809172;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.1:41773418 chr01:041773418 0 W/41773418-41773418 FN3394-S SNP G -> C AC=1;AN=184;BQB=0.828128;DP=3113;DP4=1579,1445,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.13164e-08;MQSB=0.918738;RPB=0.772884;SGB=66.8296;VDB=0.726572;EFF=INTERGENIC(MODIFIER||||||||||1) FN987-S.SNP.1:41778245 chr01:041778245 0 W/41778245-41778245 FN987-S Single Base Substitution T-C INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2146-S.SNP.1:41780515 chr01:041780515 0 W/41780515-41780515 FN2146-S SNP T -> C AC=1;AN=168;BQB=6.8625e-05;DP=3629;DP4=1786,1798,19,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000489626;MQSB=0.989992;RPB=0.329524;SGB=-445.157;VDB=0.868604;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.1:41781667 chr01:041781667 0 W/41781667-41781667 FN-153 Single Base Substitution G-A UTR_3_PRIME HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3481-S.SNP.1:41782164 chr01:041782164 0 W/41782164-41782164 FN3481-S SNP G -> T AC=1;AN=184;BQB=0.95717;DP=2070;DP4=799,1198,1,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.819e-06;MQSB=0.196114;RPB=0.761294;SGB=35.1773;VDB=0.0430443;EFF=INTRON(MODIFIER||||309|LOC_Os01g72049|protein_coding|CODING|LOC_Os01g72049.2|9|1) FN-246.SNP.1:41788282 chr01:041788282 0 W/41788282-41788282 FN-246 Single Base Substitution C-T INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-120.SNP.1:41811625 chr01:041811625 0 W/41811625-41811625 FN-120 Single Base Substitution C-A INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2315.SNP.1:41813039 chr01:041813039 0 W/41813039-41813039 FN2315 SNP A -> C AC=2;AN=192;BQB=0.92025;DP=4370;DP4=1717,2082,14,28;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.40069e-14;MQSB=0.0129562;RPB=0.990955;SGB=-46.6547;VDB=0.35244;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.1:41818266 chr01:041818266 0 W/41818266-41818266 FN448-S Single Base Substitution A-G INTERGENIC HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN448-S.SNP.1:41818270 chr01:041818270 0 W/41818270-41818270 FN448-S Single Base Substitution G-A INTERGENIC HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3842-S.SNP.1:41821743 chr01:041821743 0 W/41821743-41821743 FN3842-S SNP G -> T AC=2;AN=190;BQB=0.850497;DP=2664;DP4=1345,1206,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.74205e-15;MQSB=0.986025;RPB=0.999962;SGB=140.173;VDB=0.231454;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.1:41827538 chr01:041827538 0 W/41827538-41827538 FN1458-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1617-S.SNP.1:41827538 chr01:041827538 0 W/41827538-41827538 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3293-S.SNP.1:41827538 chr01:041827538 0 W/41827538-41827538 FN3293-S SNP G -> A AC=2;AN=184;BQB=0.940309;DP=2786;DP4=1250,1443,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.04079e-14;MQSB=0.691107;RPB=0.299563;SGB=121.091;VDB=0.671356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.1:41827538 chr01:041827538 0 W/41827538-41827538 FN3869-S SNP G -> A AC=2;AN=158;BQB=0.840266;DP=2086;DP4=1030,974,8,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.00711e-07;MQSB=0.748368;RPB=0.822994;SGB=64.5449;VDB=0.00531145;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.1:41827538 chr01:041827538 0 W/41827538-41827538 FN758-S Single Base Substitution G-A INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN1551-S.SNP.1:41839370 chr01:041839370 0 W/41839370-41839370 FN1551-S Single Base Substitution G-A INTERGENIC Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1473-S.SNP.1:41841047 chr01:041841047 0 W/41841047-41841047 FN1473-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os01g72120 glutathione S-transferase, putative, expressed SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN-115.SNP.1:41845456 chr01:041845456 0 W/41845456-41845456 FN-115 Single Base Substitution C-A UTR_3_PRIME HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1420-S.SNP.1:41853803 chr01:041853803 0 W/41853803-41853803 FN1420-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3667-S.SNP.1:41858040 chr01:041858040 0 W/41858040-41858040 FN3667-S SNP T -> A AC=1;AN=190;BQB=0.95661;DP=2865;DP4=1318,1381,8,1;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00558464;MQB=0.000768332;MQSB=0.0136579;RPB=0.76966;SGB=21.8853;VDB=0.110731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.1:41859535 chr01:041859535 0 W/41859535-41859535 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.379673;DP=4169;DP4=2411,1495,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000479731;MQB=4.29328e-15;MQSB=0.470788;RPB=0.782799;SGB=-7.05853;VDB=0.33961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.1:41867788 chr01:041867788 0 W/41867788-41867788 FN-74 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g72205 proline synthetase co-transcribed bacterial homolog protein, putative, expressed SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2445.SNP.1:41872380 chr01:041872380 0 W/41872380-41872380 FN2445 SNP A -> G AC=2;AN=200;BQB=0.239186;DP=4648;DP4=2047,2250,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.98109e-20;MQSB=0.933009;RPB=0.534348;SGB=89.4038;VDB=0.17382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y447C|701|LOC_Os01g72210|protein_coding|CODING|LOC_Os01g72210.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y320C|574|LOC_Os01g72210|protein_coding|CODING|LOC_Os01g72210.2|7|1) FN3678-S.SNP.1:41873186 chr01:041873186 0 W/41873186-41873186 FN3678-S SNP C -> G AC=1;AN=190;BQB=0.643161;DP=2210;DP4=1063,1056,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000452489;MQB=0.000230862;MQSB=0.604464;RPB=0.999876;SGB=13.4442;VDB=0.754408;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T587R|701|LOC_Os01g72210|protein_coding|CODING|LOC_Os01g72210.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T460R|574|LOC_Os01g72210|protein_coding|CODING|LOC_Os01g72210.2|9|1) FN1673-S.SNP.1:41882440 chr01:041882440 0 W/41882440-41882440 FN1673-S SNP C -> A AC=2;AN=188;BQB=0.32097;DP=2734;DP4=925,1740,8,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.39663e-14;MQSB=0.944337;RPB=0.93561;SGB=103.498;VDB=0.192737;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.1:41888174 chr01:041888174 0 W/41888174-41888174 FN-121 Single Base Substitution A-C INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1582-S.SNP.1:41888232 chr01:041888232 0 W/41888232-41888232 FN1582-S Single Base Substitution T-C INTRON Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1614-S.SNP.1:41896095 chr01:041896095 0 W/41896095-41896095 FN1614-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. W591-4-1.SNP.1:41902237 chr01:041902237 0 W/41902237-41902237 W591-4-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1582-S.SNP.1:41911113 chr01:041911113 0 W/41911113-41911113 FN1582-S Single Base Substitution G-A INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3732-S.SNP.1:41919482 chr01:041919482 0 W/41919482-41919482 FN3732-S SNP A -> T AC=1;AN=190;BQB=0.790684;DP=2470;DP4=1135,1105,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53598e-05;MQSB=0.995036;RPB=0.998938;SGB=30.8803;VDB=0.0702873;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.1:41919485 chr01:041919485 0 W/41919485-41919485 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.689456;DP=2499;DP4=1203,1117,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.48857e-06;MQSB=0.994549;RPB=0.483572;SGB=28.9929;VDB=0.119057;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.1:41928929 chr01:041928929 0 W/41928929-41928929 FN4082-S SNP G -> A AC=1;AN=182;BQB=0.977652;DP=2919;DP4=1359,1484,19,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.35488e-16;MQSB=0.972875;RPB=0.937975;SGB=88.2906;VDB=0.563427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R335W|1086|LOC_Os01g72320|protein_coding|CODING|LOC_Os01g72320.1|6|1) FN2166-S.SNP.1:41937742 chr01:041937742 0 W/41937742-41937742 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.00154871;DP=4575;DP4=2077,2444,10,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.77909e-07;MQSB=0.979096;RPB=0.934066;SGB=-69.6373;VDB=0.370974;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.1:41938146 chr01:041938146 0 W/41938146-41938146 FN964-S Single Base Substitution C-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3393-S.SNP.1:41943607 chr01:041943607 0 W/41943607-41943607 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.997958;DP=3406;DP4=1794,1452,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98941e-07;MQSB=0.999555;RPB=0.952658;SGB=53.2642;VDB=0.981086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.1:41956479 chr01:041956479 0 W/41956479-41956479 FN2445 SNP G -> A AC=2;AN=200;BQB=0.777533;DP=4806;DP4=2291,2160,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.41801e-20;MQSB=0.898424;RPB=0.391201;SGB=46.4088;VDB=0.714304;EFF=INTRON(MODIFIER||||1117|LOC_Os01g72340|protein_coding|CODING|LOC_Os01g72340.1|4|1) FN_543-2-6.SNP.1:41960393 chr01:041960393 0 W/41960393-41960393 FN_543-2-6 Single Base Substitution A-C Homo LOC_Os01g72340 beta-galactosidase, putative, expressed SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3631-S.SNP.1:41960687 chr01:041960687 0 W/41960687-41960687 FN3631-S SNP T -> A AC=2;AN=190;BQB=0.94011;DP=2874;DP4=1360,1385,5,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.29446e-05;MQSB=0.997012;RPB=0.969679;SGB=35.4339;VDB=0.26398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F750Y|1117|LOC_Os01g72340|protein_coding|CODING|LOC_Os01g72340.1|15|1) FN1732-S.SNP.1:41971434 chr01:041971434 0 W/41971434-41971434 FN1732-S SNP C -> T AC=1;AN=188;BQB=0.271807;DP=3683;DP4=1583,2051,18,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.24579e-14;MQSB=0.743878;RPB=0.267885;SGB=-83.7531;VDB=0.275911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.1:41995244 chr01:041995244 0 W/41995244-41995244 FN3906-S SNP A -> C AC=1;AN=158;BQB=0.974408;DP=2487;DP4=1256,1155,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00723764;MQB=0.00373713;MQSB=3.74138e-05;RPB=0.67349;SGB=13.8578;VDB=0.0602416;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tGa|L401*|1295|LOC_Os01g72400|protein_coding|CODING|LOC_Os01g72400.1|1|1);LOF=(LOC_Os01g72400|LOC_Os01g72400|1|1.00);NMD=(LOC_Os01g72400|LOC_Os01g72400|1|1.00) FN3743-S.SNP.1:41996277 chr01:041996277 0 W/41996277-41996277 FN3743-S SNP C -> T AC=2;AN=190;BQB=0.718859;DP=2852;DP4=1458,1300,11,9;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.00420757;MQB=0.799875;MQSB=0.512984;RPB=0.317024;SGB=60.9777;VDB=0.614437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D57N|1295|LOC_Os01g72400|protein_coding|CODING|LOC_Os01g72400.1|1|1) FN3502-S.SNP.1:42006993 chr01:042006993 0 W/42006993-42006993 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.927245;DP=2862;DP4=1259,1524,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.39234e-12;MQSB=0.98243;RPB=0.966182;SGB=71.4172;VDB=0.886665;EFF=UTR_3_PRIME(MODIFIER||169||197|LOC_Os01g72430|protein_coding|CODING|LOC_Os01g72430.1|3|1) FN2785-S.SNP.1:42013764 chr01:042013764 0 W/42013764-42013764 FN2785-S SNP T -> C AC=1;AN=198;BQB=0.177932;DP=4158;DP4=2105,1749,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.95361e-10;MQSB=0.990813;RPB=0.831011;SGB=14.1348;VDB=0.0795802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.1:42021054 chr01:042021054 0 W/42021054-42021054 FN3769-S SNP G -> A AC=1;AN=190;BQB=0.841729;DP=2616;DP4=1371,1146,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.71252e-05;MQSB=0.907794;RPB=0.621739;SGB=44.5415;VDB=0.893556;EFF=UTR_3_PRIME(MODIFIER||55||87|LOC_Os01g72470|protein_coding|CODING|LOC_Os01g72470.1|1|1) FN1351-S.SNP.1:42029536 chr01:042029536 0 W/42029536-42029536 FN1351-S Single Base Substitution C-G INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN_N1-151-7.SNP.1:42029784 chr01:042029784 0 W/42029784-42029784 FN_N1-151-7 Single Base Substitution T-A Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN_N1-151-7.SNP.1:42029785 chr01:042029785 0 W/42029785-42029785 FN_N1-151-7 Single Base Substitution A-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2621-S.SNP.1:42032455 chr01:042032455 0 W/42032455-42032455 FN2621-S SNP G -> T AC=1;AN=200;BQB=0.960319;DP=5211;DP4=2317,2598,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000191902;MQB=6.88794e-13;MQSB=0.890076;RPB=0.344082;SGB=61.9006;VDB=0.6496;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.1:42041148 chr01:042041148 0 W/42041148-42041148 FN510-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os01g72500 retrotransposon protein, putative, unclassified, expressed SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN561-S.SNP.1:42044890 chr01:042044890 0 W/42044890-42044890 FN561-S Single Base Substitution G-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN1477-S.SNP.1:42052750 chr01:042052750 0 W/42052750-42052750 FN1477-S Single Base Substitution T-G INTERGENIC Homo SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2215-S.SNP.1:42057538 chr01:042057538 0 W/42057538-42057538 FN2215-S SNP G -> A AC=2;AN=190;BQB=0.597505;DP=4850;DP4=2335,2159,21,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000206186;MQB=1.96631e-30;MQSB=0.307794;RPB=0.869988;SGB=235.804;VDB=0.0189988;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.1:42057994 chr01:042057994 0 W/42057994-42057994 FN542-S Single Base Substitution A-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN542-S.SNP.1:42057996 chr01:042057996 0 W/42057996-42057996 FN542-S Single Base Substitution G-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN-168.SNP.1:42059100 chr01:042059100 0 W/42059100-42059100 FN-168 Single Base Substitution G-T UTR_3_PRIME HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN-334.SNP.1:42063109 chr01:042063109 0 W/42063109-42063109 FN-334 Single Base Substitution G-A INTERGENIC HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN_786-4-1.SNP.1:42063680 chr01:042063680 0 W/42063680-42063680 FN_786-4-1 Single Base Substitution G-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3547-S.SNP.1:42064024 chr01:042064024 0 W/42064024-42064024 FN3547-S SNP G -> A AC=1;AN=188;BQB=0.821749;DP=3931;DP4=1850,1996,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.14143e-10;MQSB=0.977484;RPB=0.314719;SGB=62.6088;VDB=0.0752388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P379S|520|LOC_Os01g72520|protein_coding|CODING|LOC_Os01g72520.1|3|1) FN1533-S.SNP.1:42067988 chr01:042067988 0 W/42067988-42067988 FN1533-S Single Base Substitution A-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1114-S.SNP.1:42071508 chr01:042071508 0 W/42071508-42071508 FN1114-S Single Base Substitution G-A INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN4305-S.SNP.1:42096832 chr01:042096832 0 W/42096832-42096832 FN4305-S SNP C -> T AC=2;AN=170;BQB=0.962558;DP=2080;DP4=876,1142,7,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.0447e-10;MQSB=0.893155;RPB=0.912129;SGB=74.528;VDB=0.257391;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.1:42099991 chr01:042099991 0 W/42099991-42099991 FN752-S Single Base Substitution C-A INTERGENIC HOMO SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN4151-S.SNP.1:42104148 chr01:042104148 0 W/42104148-42104148 FN4151-S SNP T -> A AC=2;AN=170;BQB=0.999422;DP=2617;DP4=1276,1237,17,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.7684e-16;MQSB=0.992483;RPB=0.79527;SGB=127.84;VDB=0.360213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.1:42106751 chr01:042106751 0 W/42106751-42106751 FN3910-S SNP C -> T AC=1;AN=158;BQB=0.877544;DP=2415;DP4=1139,1113,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.97687e-06;MQSB=0.779357;RPB=0.918575;SGB=27.3346;VDB=0.577434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.1:42111458 chr01:042111458 0 W/42111458-42111458 FN2696-S SNP G -> T AC=2;AN=200;BQB=0.718291;DP=4879;DP4=2274,2325,19,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.93991e-27;MQSB=0.958427;RPB=0.600117;SGB=102.43;VDB=0.943727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.1:42115731 chr01:042115731 0 W/42115731-42115731 FN3560-S SNP C -> T AC=1;AN=188;BQB=0.98429;DP=2493;DP4=1062,1309,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.00018694;MQSB=0.0303374;RPB=0.780911;SGB=44.4357;VDB=0.54425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.1:42116111 chr01:042116111 0 W/42116111-42116111 FN3915-S SNP C -> T AC=2;AN=158;BQB=0.883981;DP=1796;DP4=1107,595,10,4;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000556793;MQB=8.63101e-07;MQSB=0.633132;RPB=0.0791744;SGB=37.4429;VDB=0.411003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.1:42121145 chr01:042121145 0 W/42121145-42121145 FN3342-S SNP A -> T AC=1;AN=184;BQB=0.456168;DP=2637;DP4=1397,1079,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.67228e-05;MQSB=0.327474;RPB=0.0314758;SGB=-16.8012;VDB=0.085717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.1:42121589 chr01:042121589 0 W/42121589-42121589 FN1176-S Single Base Substitution C-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3424-S.SNP.1:42137101 chr01:042137101 0 W/42137101-42137101 FN3424-S SNP C -> A AC=1;AN=184;BQB=0.899521;DP=2226;DP4=807,1310,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000273111;MQSB=2.44478e-05;RPB=0.908543;SGB=26.1347;VDB=0.626747;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.1:42140028 chr01:042140028 0 W/42140028-42140028 FN_798-4-2 Single Base Substitution G-A HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN_798-4-2.SNP.1:42140029 chr01:042140029 0 W/42140029-42140029 FN_798-4-2 Single Base Substitution T-A HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN2494.SNP.1:42145820 chr01:042145820 0 W/42145820-42145820 FN2494 SNP G -> A AC=1;AN=200;BQB=0.156105;DP=4633;DP4=2249,1992,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94153e-08;MQSB=0.0278128;RPB=0.385838;SGB=47.4799;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.1:42161721 chr01:042161721 0 W/42161721-42161721 FN-203 Single Base Substitution G-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-92.SNP.1:42161736 chr01:042161736 0 W/42161736-42161736 FN-92 Single Base Substitution G-C INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-92.SNP.1:42161737 chr01:042161737 0 W/42161737-42161737 FN-92 Single Base Substitution C-A INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN468-S.SNP.1:42162597 chr01:042162597 0 W/42162597-42162597 FN468-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2342.SNP.1:42167837 chr01:042167837 0 W/42167837-42167837 FN2342 SNP C -> T AC=1;AN=192;BQB=0.99326;DP=4624;DP4=2439,1884,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.51288e-06;MQSB=0.397431;RPB=0.954778;SGB=2.66176;VDB=0.419688;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.1:42169863 chr01:042169863 0 W/42169863-42169863 FN472-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os01g72680 disease resistance protein RPS2, putative, expressed SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3536-S.SNP.1:42177016 chr01:042177016 0 W/42177016-42177016 FN3536-S SNP C -> T AC=1;AN=188;BQB=0.97002;DP=2896;DP4=1304,1506,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.74422e-09;MQSB=0.999935;RPB=0.546067;SGB=5.5382;VDB=0.962111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.1:42180382 chr01:042180382 0 W/42180382-42180382 FN4172-S SNP G -> C AC=1;AN=170;BQB=0.979171;DP=2612;DP4=1119,1405,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96145e-10;MQSB=0.999274;RPB=0.844358;SGB=65.6427;VDB=0.245555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q249H|571|LOC_Os01g72690|protein_coding|CODING|LOC_Os01g72690.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q210H|532|LOC_Os01g72690|protein_coding|CODING|LOC_Os01g72690.2|4|1),SPLICE_SITE_REGION(LOW||||571|LOC_Os01g72690|protein_coding|CODING|LOC_Os01g72690.1|5|1),SPLICE_SITE_REGION(LOW||||532|LOC_Os01g72690|protein_coding|CODING|LOC_Os01g72690.2|4|1) FN2620-S.SNP.1:42191663 chr01:042191663 0 W/42191663-42191663 FN2620-S SNP G -> T AC=1;AN=198;BQB=0.497742;DP=4126;DP4=1944,1902,8,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.99216e-10;MQSB=0.97373;RPB=0.959557;SGB=109.285;VDB=0.7615;EFF=INTRON(MODIFIER||||389|LOC_Os01g72710|protein_coding|CODING|LOC_Os01g72710.1|2|1) FN-287.SNP.1:42191959 chr01:042191959 0 W/42191959-42191959 FN-287 Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN3728-S.SNP.1:42200491 chr01:042200491 0 W/42200491-42200491 FN3728-S SNP C -> T AC=2;AN=190;BQB=0.727459;DP=3051;DP4=1346,1573,9,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.18652e-12;MQSB=0.956788;RPB=0.739807;SGB=49.1985;VDB=0.00300662;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.1:42218930 chr01:042218930 0 W/42218930-42218930 FN4090-S SNP T -> A AC=1;AN=182;BQB=0.991644;DP=2613;DP4=1206,1342,10,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08131e-08;MQSB=0.951922;RPB=0.933313;SGB=53.1331;VDB=0.155841;EFF=INTRON(MODIFIER||||1176|LOC_Os01g72780|protein_coding|CODING|LOC_Os01g72780.1|2|1) FN1731-S.SNP.1:42233095 chr01:042233095 0 W/42233095-42233095 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.0469793;DP=3468;DP4=1505,1925,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.38475;MQSB=0.962912;RPB=0.465808;SGB=-91.3539;VDB=0.0520849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.1:42233505 chr01:042233505 0 W/42233505-42233505 FN2124-S SNP A -> G AC=1;AN=168;BQB=0.40955;DP=3986;DP4=1939,2008,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.92395e-06;MQSB=0.821076;RPB=0.503484;SGB=-38.3665;VDB=0.901572;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.1:42234087 chr01:042234087 0 W/42234087-42234087 FN918-S Single Base Substitution A-G INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3748-S.SNP.1:42238334 chr01:042238334 0 W/42238334-42238334 FN3748-S SNP C -> A AC=2;AN=190;BQB=0.487432;DP=2805;DP4=1267,1373,19,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44801e-13;MQSB=0.661304;RPB=0.524286;SGB=117.403;VDB=0.880616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.1:42250379 chr01:042250379 0 W/42250379-42250379 FN2124-S SNP A -> G AC=1;AN=168;BQB=0.00829394;DP=3406;DP4=1583,1783,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62408e-08;MQSB=0.929533;RPB=0.606236;SGB=-12.3568;VDB=0.675377;EFF=INTRON(MODIFIER||||310|LOC_Os01g72834|protein_coding|CODING|LOC_Os01g72834.1|3|1) FN1700-S.SNP.1:42253912 chr01:042253912 0 W/42253912-42253912 FN1700-S SNP C -> T AC=2;AN=188;BQB=0.277984;DP=3918;DP4=1864,2000,16,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.0017e-21;MQSB=0.981214;RPB=0.761556;SGB=162.561;VDB=0.4047;EFF=INTRON(MODIFIER||||310|LOC_Os01g72834|protein_coding|CODING|LOC_Os01g72834.1|5|1) FN462-S.SNP.1:42253912 chr01:042253912 0 W/42253912-42253912 FN462-S Single Base Substitution C-T INTRON HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN508-S.SNP.1:42258110 chr01:042258110 0 W/42258110-42258110 FN508-S Single Base Substitution G-A INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN3282-S.SNP.1:42260049 chr01:042260049 0 W/42260049-42260049 FN3282-S SNP A -> T AC=2;AN=184;BQB=0.542011;DP=2985;DP4=1619,1219,13,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.34837e-12;MQSB=0.970685;RPB=0.968826;SGB=84.9167;VDB=0.628047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.1:42261464 chr01:042261464 0 W/42261464-42261464 FN2453 SNP C -> T AC=1;AN=200;BQB=0.999882;DP=5044;DP4=2603,2201,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36074e-15;MQSB=0.999647;RPB=0.670181;SGB=90.7419;VDB=0.701428;EFF=INTRON(MODIFIER||||608|LOC_Os01g72860|protein_coding|CODING|LOC_Os01g72860.1|1|1) FN2476.SNP.1:42266980 chr01:042266980 0 W/42266980-42266980 FN2476 SNP G -> T AC=1;AN=200;BQB=0.956848;DP=4537;DP4=2070,2168,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04566e-12;MQSB=0.972149;RPB=0.840105;SGB=95.7111;VDB=0.563736;EFF=INTRON(MODIFIER||||307|LOC_Os01g72870|protein_coding|CODING|LOC_Os01g72870.1|8|1),INTRON(MODIFIER||||307|LOC_Os01g72870|protein_coding|CODING|LOC_Os01g72870.2|7|1),INTRON(MODIFIER||||307|LOC_Os01g72870|protein_coding|CODING|LOC_Os01g72870.3|7|1) FN745-S.SNP.1:42274948 chr01:042274948 0 W/42274948-42274948 FN745-S Single Base Substitution A-T INTERGENIC HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN745-S.SNP.1:42274951 chr01:042274951 0 W/42274951-42274951 FN745-S Single Base Substitution G-A INTERGENIC HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2082-S.SNP.1:42279521 chr01:042279521 0 W/42279521-42279521 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.179348;DP=3311;DP4=2003,1264,17,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.63871e-08;MQSB=0.971821;RPB=0.241932;SGB=-40.0741;VDB=0.0589963;EFF=INTRON(MODIFIER||||432|LOC_Os01g72890|protein_coding|CODING|LOC_Os01g72890.1|9|1),INTRON(MODIFIER||||431|LOC_Os01g72890|protein_coding|CODING|LOC_Os01g72890.2|9|1) FN-251.SNP.1:42285388 chr01:042285388 0 W/42285388-42285388 FN-251 Single Base Substitution T-C INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2224-S.SNP.1:42287068 chr01:042287068 0 W/42287068-42287068 FN2224-S SNP G -> T AC=1;AN=190;BQB=0.968908;DP=5220;DP4=2207,2692,12,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.30765e-15;MQSB=0.395641;RPB=0.438457;SGB=33.6348;VDB=0.750313;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.1:42287692 chr01:042287692 0 W/42287692-42287692 FN-115 Single Base Substitution C-A INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2724-S.SNP.1:42289672 chr01:042289672 0 W/42289672-42289672 FN2724-S SNP A -> G AC=1;AN=200;BQB=9.61079e-07;DP=5470;DP4=1631,2518,16,15;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00658135;MQB=0.00291372;MQSB=0.0050452;RPB=0.371042;SGB=-503.645;VDB=0.061579;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.1:42289718 chr01:042289718 0 W/42289718-42289718 FN1369-S Single Base Substitution A-G INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2190-S.SNP.1:42295572 chr01:042295572 0 W/42295572-42295572 FN2190-S SNP C -> T AC=1;AN=190;BQB=0.947611;DP=4698;DP4=2355,2001,21,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.5928e-21;MQSB=0.406682;RPB=0.633642;SGB=84.9528;VDB=0.388329;EFF=INTERGENIC(MODIFIER||||||||||1) FN-381.SNP.1:42310075 chr01:042310075 0 W/42310075-42310075 FN-381 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g72940 phosphatidylserine decarboxylase, putative, expressed SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN4077-S.SNP.1:42314039 chr01:042314039 0 W/42314039-42314039 FN4077-S SNP G -> C AC=1;AN=182;BQB=0.843862;DP=2851;DP4=1382,1416,3,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.01401e-05;MQSB=0.994297;RPB=0.994191;SGB=26.0691;VDB=0.841706;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.1:42314248 chr01:042314248 0 W/42314248-42314248 FN939-S Single Base Substitution A-C INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN548-S.SNP.1:42324700 chr01:042324700 0 W/42324700-42324700 FN548-S Single Base Substitution G-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN548-S.SNP.1:42324701 chr01:042324701 0 W/42324701-42324701 FN548-S Single Base Substitution T-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-200.SNP.1:42331427 chr01:042331427 0 W/42331427-42331427 FN-200 Single Base Substitution T-G INTRON HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3382-S.SNP.1:42332043 chr01:042332043 0 W/42332043-42332043 FN3382-S SNP A -> T AC=1;AN=184;BQB=0.983607;DP=2794;DP4=1227,1391,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.29736e-09;MQSB=0.994794;RPB=0.995941;SGB=49.835;VDB=0.131244;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I448|717|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.1|9|1),SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I355|624|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.2|9|1) FN3382-S.SNP.1:42332044 chr01:042332044 0 W/42332044-42332044 FN3382-S SNP A -> T AC=1;AN=184;BQB=0.155192;DP=2781;DP4=1279,1400,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09504e-07;MQSB=0.989641;RPB=0.99653;SGB=62.3078;VDB=0.0491851;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I448N|717|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I355N|624|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.2|9|1) FN2401.SNP.1:42335701 chr01:042335701 0 W/42335701-42335701 FN2401 SNP T -> A AC=2;AN=200;BQB=0.96676;DP=3816;DP4=1714,1535,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.00247e-13;MQSB=0.969102;RPB=0.982061;SGB=30.3571;VDB=0.730839;EFF=NON_SYNONYMOUS_START(LOW|MISSENSE|Atg/Ttg|M1L|717|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.1|1|1),START_GAINED(LOW||||624|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.2|1|1),UTR_5_PRIME(MODIFIER||340||624|LOC_Os01g72980|protein_coding|CODING|LOC_Os01g72980.2|1|1) FN2121-S.SNP.1:42352610 chr01:042352610 0 W/42352610-42352610 FN2121-S SNP T -> C AC=1;AN=168;BQB=0.676124;DP=3724;DP4=2034,1646,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.51536e-12;MQSB=0.82675;RPB=0.843853;SGB=-11.926;VDB=0.500241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I241V|387|LOC_Os01g73000|protein_coding|CODING|LOC_Os01g73000.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I241V|387|LOC_Os01g73000|protein_coding|CODING|LOC_Os01g73000.2|8|1) FN2407.SNP.1:42353115 chr01:042353115 0 W/42353115-42353115 FN2407 SNP G -> A AC=2;AN=200;BQB=0.303486;DP=5130;DP4=2469,2321,23,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.63269e-33;MQSB=0.808506;RPB=0.998414;SGB=70.4864;VDB=0.921586;EFF=INTRON(MODIFIER||||387|LOC_Os01g73000|protein_coding|CODING|LOC_Os01g73000.1|5|1),INTRON(MODIFIER||||387|LOC_Os01g73000|protein_coding|CODING|LOC_Os01g73000.2|5|1) FN1625-S.SNP.1:42356389 chr01:042356389 0 W/42356389-42356389 FN1625-S Single Base Substitution G-C INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:42356389 chr01:042356389 0 W/42356389-42356389 FN1626-S SNP G -> C AC=2;AN=188;BQB=0.132741;DP=1604;DP4=1565,13,15,1;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.27468e-06;MQSB=0.00199429;RPB=0.887619;SGB=5.5382;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.1:42358924 chr01:042358924 0 W/42358924-42358924 FN3787-S SNP C -> T AC=2;AN=190;BQB=0.96512;DP=2532;DP4=1129,1289,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.75252e-18;MQSB=0.806771;RPB=0.90577;SGB=158.388;VDB=0.926421;EFF=INTRON(MODIFIER||||367|LOC_Os01g73005|protein_coding|CODING|LOC_Os01g73005.1|7|1) FN3933-S.SNP.1:42360858 chr01:042360858 0 W/42360858-42360858 FN3933-S SNP C -> T AC=2;AN=158;BQB=0.486759;DP=2775;DP4=1326,1328,21,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.61685e-16;MQSB=0.968011;RPB=0.982948;SGB=151.934;VDB=0.227541;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.1:42362245 chr01:042362245 0 W/42362245-42362245 FN790-S Single Base Substitution C-A INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN1084-S.SNP.1:42368232 chr01:042368232 0 W/42368232-42368232 FN1084-S Single Base Substitution G-A INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1406-S.SNP.1:42375783 chr01:042375783 0 W/42375783-42375783 FN1406-S Single Base Substitution T-A INTERGENIC Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN737-S.SNP.1:42381849 chr01:042381849 0 W/42381849-42381849 FN737-S Single Base Substitution A-C INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN474-S.SNP.1:42382042 chr01:042382042 0 W/42382042-42382042 FN474-S Single Base Substitution T-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN3488-S.SNP.1:42385370 chr01:042385370 0 W/42385370-42385370 FN3488-S SNP G -> A AC=1;AN=184;BQB=0.98616;DP=3281;DP4=1969,1127,15,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.39736e-11;MQSB=0.70769;RPB=0.244264;SGB=28.3187;VDB=0.101507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.1:42387465 chr01:042387465 0 W/42387465-42387465 FN1401-S Single Base Substitution A-C INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-410.SNP.1:42395055 chr01:042395055 0 W/42395055-42395055 FN-410 Single Base Substitution C-T INTRON HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN_N1-151-7.SNP.1:42395190 chr01:042395190 0 W/42395190-42395190 FN_N1-151-7 Single Base Substitution T-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN4126-S.SNP.1:42400898 chr01:042400898 0 W/42400898-42400898 FN4126-S SNP C -> A AC=2;AN=182;BQB=0.948524;DP=2844;DP4=1393,1360,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.82073e-12;MQSB=0.547925;RPB=0.705409;SGB=70.7363;VDB=0.864873;EFF=UTR_5_PRIME(MODIFIER||295||412|LOC_Os01g73080|protein_coding|CODING|LOC_Os01g73080.3|1|1),UTR_5_PRIME(MODIFIER||295||412|LOC_Os01g73080|protein_coding|CODING|LOC_Os01g73080.1|1|1),UTR_5_PRIME(MODIFIER||295||412|LOC_Os01g73080|protein_coding|CODING|LOC_Os01g73080.2|1|1) FN1596-S.SNP.1:42401251 chr01:042401251 0 W/42401251-42401251 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2273-S.SNP.1:42404708 chr01:042404708 0 W/42404708-42404708 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.415657;DP=4128;DP4=1708,2062,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8412e-10;MQSB=0.662619;RPB=0.335039;SGB=-36.7706;VDB=0.249712;EFF=INTRON(MODIFIER||||310|LOC_Os01g73100|protein_coding|CODING|LOC_Os01g73100.1|1|1) FN3515-S.SNP.1:42410160 chr01:042410160 0 W/42410160-42410160 FN3515-S SNP C -> G AC=1;AN=188;BQB=0.93473;DP=2748;DP4=1177,1511,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74798e-08;MQSB=0.96957;RPB=0.575492;SGB=48.979;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.1:42411269 chr01:042411269 0 W/42411269-42411269 FN929-S Single Base Substitution T-A INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN929-S.SNP.1:42411270 chr01:042411270 0 W/42411270-42411270 FN929-S Single Base Substitution G-T INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2150-S.SNP.1:42411713 chr01:042411713 0 W/42411713-42411713 FN2150-S SNP C -> T AC=2;AN=168;BQB=0.999152;DP=2715;DP4=990,1657,14,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.25907e-15;MQSB=0.963608;RPB=0.983392;SGB=-8.91027;VDB=0.541378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.1:42413270 chr01:042413270 0 W/42413270-42413270 FN2471 SNP C -> T AC=2;AN=200;BQB=0.423014;DP=4291;DP4=2262,1686,33,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.14732e-30;MQSB=0.477086;RPB=0.909559;SGB=210.344;VDB=0.435838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.1:42413270 chr01:042413270 0 W/42413270-42413270 FN3653-S SNP C -> T AC=2;AN=190;BQB=0.754728;DP=2301;DP4=1380,810,12,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.105e-08;MQSB=0.70222;RPB=0.0404024;SGB=50.3161;VDB=0.00254067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.1:42419371 chr01:042419371 0 W/42419371-42419371 FN2452 SNP A -> T AC=1;AN=200;BQB=0.307101;DP=4988;DP4=2231,2266,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.55585e-14;MQSB=0.999847;RPB=0.985235;SGB=47.7211;VDB=0.654635;EFF=UTR_3_PRIME(MODIFIER||178||102|LOC_Os01g73140|protein_coding|CODING|LOC_Os01g73140.1|4|1) FN1470-S.SNP.1:42421757 chr01:042421757 0 W/42421757-42421757 FN1470-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3382-S.SNP.1:42421958 chr01:042421958 0 W/42421958-42421958 FN3382-S SNP G -> A AC=1;AN=184;BQB=0.826546;DP=2749;DP4=1374,1291,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.3153e-09;MQSB=0.999113;RPB=0.916395;SGB=46.3132;VDB=0.669814;EFF=UTR_3_PRIME(MODIFIER||29||551|LOC_Os01g73150|protein_coding|CODING|LOC_Os01g73150.1|5|1) FN1687-S.SNP.1:42432788 chr01:042432788 0 W/42432788-42432788 FN1687-S SNP G -> T AC=1;AN=188;BQB=0.124603;DP=3465;DP4=1848,1572,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.77542e-07;MQSB=0.988888;RPB=0.999877;SGB=14.798;VDB=0.217506;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.1:42438626 chr01:042438626 0 W/42438626-42438626 FN4122-S SNP G -> T AC=2;AN=182;BQB=0.888229;DP=2984;DP4=1488,1295,20,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.40743e-20;MQSB=0.57387;RPB=0.882106;SGB=112.867;VDB=0.0105489;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.1:42439235 chr01:042439235 0 W/42439235-42439235 FN1295-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2531-S.SNP.1:42444535 chr01:042444535 0 W/42444535-42444535 FN2531-S SNP A -> T AC=1;AN=198;BQB=0.999447;DP=4240;DP4=2446,1552,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.52312e-07;MQSB=0.97733;RPB=0.482224;SGB=29.3637;VDB=0.00948039;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.1:42444985 chr01:042444985 0 W/42444985-42444985 FN2551-S SNP C -> T AC=2;AN=198;BQB=0.978607;DP=3952;DP4=1935,1696,32,29;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=9.7682e-22;MQSB=0.966345;RPB=0.741109;SGB=58.7039;VDB=0.949702;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.1:42454091 chr01:042454091 0 W/42454091-42454091 FN4096-S SNP G -> A AC=1;AN=182;BQB=0.934478;DP=2522;DP4=1240,1225,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.5805e-05;MQSB=0.996915;RPB=0.988803;SGB=21.5845;VDB=0.603916;EFF=UTR_3_PRIME(MODIFIER||1019||168|LOC_Os01g73234|protein_coding|CODING|LOC_Os01g73234.1|5|1) FN2596-S.SNP.1:42454946 chr01:042454946 0 W/42454946-42454946 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.556305;DP=4113;DP4=1866,2022,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.35284e-07;MQSB=0.565357;RPB=0.914693;SGB=1.37381;VDB=0.259689;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.1:42467522 chr01:042467522 0 W/42467522-42467522 FN1302-S Single Base Substitution T-A INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1108-S.SNP.1:42468013 chr01:042468013 0 W/42468013-42468013 FN1108-S Single Base Substitution C-A INTRON HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2316.SNP.1:42525835 chr01:042525835 0 W/42525835-42525835 FN2316 SNP C -> T AC=1;AN=192;BQB=0.795402;DP=5205;DP4=2528,2204,11,20;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000192123;MQB=4.53243e-13;MQSB=0.845354;RPB=0.779677;SGB=64.8148;VDB=0.159397;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.1:42540470 chr01:042540470 0 W/42540470-42540470 FN723-S Single Base Substitution T-A INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN3090-S.SNP.1:42547663 chr01:042547663 0 W/42547663-42547663 FN3090-S SNP T -> C AC=1;AN=184;BQB=0.783103;DP=2130;DP4=857,1142,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.88448e-07;MQSB=0.464543;RPB=0.305083;SGB=-53.3121;VDB=0.513919;EFF=START_LOST(HIGH|MISSENSE|aTg/aCg|M1T|373|LOC_Os01g73420|protein_coding|CODING|LOC_Os01g73420.1|1|1);LOF=(LOC_Os01g73420|LOC_Os01g73420|1|1.00) FN-342.SNP.1:42549954 chr01:042549954 0 W/42549954-42549954 FN-342 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os01g73430 RNA polymerase IV largest subunit, putative, expressed SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN812-S.SNP.1:42554068 chr01:042554068 0 W/42554068-42554068 FN812-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os01g73430 RNA polymerase IV largest subunit, putative, expressed SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3492-S.SNP.1:42555946 chr01:042555946 0 W/42555946-42555946 FN3492-S SNP A -> T AC=1;AN=184;BQB=0.979717;DP=2696;DP4=1331,1302,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94644e-07;MQSB=0.878761;RPB=0.952824;SGB=44.2207;VDB=0.459646;EFF=INTRON(MODIFIER||||1570|LOC_Os01g73430|protein_coding|CODING|LOC_Os01g73430.1|4|1) FN2114-S.SNP.1:42556238 chr01:042556238 0 W/42556238-42556238 FN2114-S SNP C -> A AC=1;AN=168;BQB=0.745507;DP=3189;DP4=1388,1741,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.31015e-06;MQSB=0.997038;RPB=0.323276;SGB=-37.2282;VDB=0.0128063;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M91I|1570|LOC_Os01g73430|protein_coding|CODING|LOC_Os01g73430.1|3|1) FN439-S.SNP.1:42562725 chr01:042562725 0 W/42562725-42562725 FN439-S Single Base Substitution A-G INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN4183-S.SNP.1:42567284 chr01:042567284 0 W/42567284-42567284 FN4183-S SNP A -> T AC=2;AN=170;BQB=0.998332;DP=2062;DP4=1002,987,18,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08182e-15;MQSB=0.965293;RPB=0.960276;SGB=123.397;VDB=0.600772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.1:42573941 chr01:042573941 0 W/42573941-42573941 FN3725-S SNP T -> C AC=1;AN=190;BQB=0.783972;DP=3044;DP4=1606,1309,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000328515;MQB=1.62755e-11;MQSB=0.822157;RPB=0.999945;SGB=60.9777;VDB=0.710143;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.1:42577609 chr01:042577609 0 W/42577609-42577609 FN_829-2-5 Single Base Substitution G-A HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2331.SNP.1:42579424 chr01:042579424 0 W/42579424-42579424 FN2331 SNP C -> T AC=1;AN=192;BQB=0.839817;DP=4934;DP4=2452,2243,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.91544e-11;MQSB=0.903163;RPB=0.69129;SGB=39.1713;VDB=0.123951;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T28M|897|LOC_Os01g73480|protein_coding|CODING|LOC_Os01g73480.1|1|1) FN-133.SNP.1:42584784 chr01:042584784 0 W/42584784-42584784 FN-133 Single Base Substitution G-A INTERGENIC HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-161.SNP.1:42608504 chr01:042608504 0 W/42608504-42608504 FN-161 Single Base Substitution T-A INTRON HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN4046-S.SNP.1:42610332 chr01:042610332 0 W/42610332-42610332 FN4046-S SNP T -> A AC=2;AN=168;BQB=0.755622;DP=2527;DP4=1211,1235,17,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.49367e-12;MQSB=0.961026;RPB=0.938081;SGB=75.9177;VDB=0.838447;EFF=INTRON(MODIFIER||||1317|LOC_Os01g73530|protein_coding|CODING|LOC_Os01g73530.1|20|1),INTRON(MODIFIER||||1325|LOC_Os01g73530|protein_coding|CODING|LOC_Os01g73530.2|20|1) FN-123.SNP.1:42612689 chr01:042612689 0 W/42612689-42612689 FN-123 Single Base Substitution A-T INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1064-S.SNP.1:42613290 chr01:042613290 0 W/42613290-42613290 FN1064-S Single Base Substitution C-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN3521-S.SNP.1:42618365 chr01:042618365 0 W/42618365-42618365 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.833052;DP=2596;DP4=1176,1360,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.04591e-07;MQSB=0.943261;RPB=0.963756;SGB=58.0655;VDB=0.294849;EFF=UTR_3_PRIME(MODIFIER||449||481|LOC_Os01g73550|protein_coding|CODING|LOC_Os01g73550.2|12|1),UTR_3_PRIME(MODIFIER||339||490|LOC_Os01g73550|protein_coding|CODING|LOC_Os01g73550.1|13|1) FN2768-S.SNP.1:42619382 chr01:042619382 0 W/42619382-42619382 FN2768-S SNP A -> G AC=1;AN=198;BQB=0.852072;DP=4336;DP4=1950,2128,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.41544e-11;MQSB=0.850069;RPB=0.548599;SGB=72.5245;VDB=0.16204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S268P|463|LOC_Os01g73560|protein_coding|CODING|LOC_Os01g73560.1|10|1) FN2591-S.SNP.1:42622187 chr01:042622187 0 W/42622187-42622187 FN2591-S SNP A -> G AC=1;AN=198;BQB=0.551645;DP=4037;DP4=1623,2086,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.10097e-09;MQSB=0.980898;RPB=0.895453;SGB=21.559;VDB=0.419688;EFF=INTRON(MODIFIER||||113|LOC_Os01g73570|protein_coding|CODING|LOC_Os01g73570.2|1|1) FN1120-S.SNP.1:42624325 chr01:042624325 0 W/42624325-42624325 FN1120-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g73570 vacuolar protein sorting 55 family protein, putative, expressed SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1295-S.SNP.1:42638365 chr01:042638365 0 W/42638365-42638365 FN1295-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1295-S.SNP.1:42638368 chr01:042638368 0 W/42638368-42638368 FN1295-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2373.SNP.1:42639090 chr01:042639090 0 W/42639090-42639090 FN2373 SNP T -> C AC=2;AN=192;BQB=0.995394;DP=4834;DP4=2368,2114,34,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.81013e-34;MQSB=0.854312;RPB=0.543143;SGB=71.4931;VDB=0.34432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E410G|456|LOC_Os01g73604|protein_coding|CODING|LOC_Os01g73604.1|4|1) FN882-S.SNP.1:42639768 chr01:042639768 0 W/42639768-42639768 FN882-S Single Base Substitution G-T INTRON HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2724-S.SNP.1:42645991 chr01:042645991 0 W/42645991-42645991 FN2724-S SNP G -> A AC=1;AN=200;BQB=0.595052;DP=4301;DP4=1802,2173,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.1487e-15;MQSB=0.543931;RPB=0.253537;SGB=-8.26887;VDB=0.727115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.1:42646682 chr01:042646682 0 W/42646682-42646682 FN2468 SNP C -> T AC=1;AN=200;BQB=0.760413;DP=4677;DP4=2403,2051,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.57942e-09;MQSB=0.850071;RPB=0.631274;SGB=77.2904;VDB=0.782382;EFF=INTRON(MODIFIER||||1245|LOC_Os01g73620|protein_coding|CODING|LOC_Os01g73620.1|1|1),INTRON(MODIFIER||||1238|LOC_Os01g73620|protein_coding|CODING|LOC_Os01g73620.2|1|1) FN483-S.SNP.1:42649473 chr01:042649473 0 W/42649473-42649473 FN483-S Single Base Substitution C-T INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3470-S.SNP.1:42660402 chr01:042660402 0 W/42660402-42660402 FN3470-S SNP A -> G AC=1;AN=184;BQB=0.953466;DP=2705;DP4=1293,1347,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.47466e-07;MQSB=0.979682;RPB=0.991709;SGB=48.7425;VDB=0.762846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D26G|357|LOC_Os01g73640|protein_coding|CODING|LOC_Os01g73640.1|2|1) FN980-S.SNP.1:42667970 chr01:042667970 0 W/42667970-42667970 FN980-S Single Base Substitution G-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.1:42667971 chr01:042667971 0 W/42667971-42667971 FN980-S Single Base Substitution G-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.1:42668019 chr01:042668019 0 W/42668019-42668019 FN980-S Single Base Substitution G-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.1:42668020 chr01:042668020 0 W/42668020-42668020 FN980-S Single Base Substitution C-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-245.SNP.1:42670366 chr01:042670366 0 W/42670366-42670366 FN-245 Single Base Substitution C-T INTRON HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. W470-2-1.SNP.1:42671776 chr01:042671776 0 W/42671776-42671776 W470-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1106-S.SNP.1:42672111 chr01:042672111 0 W/42672111-42672111 FN1106-S Single Base Substitution T-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2125-S.SNP.1:42689210 chr01:042689210 0 W/42689210-42689210 FN2125-S SNP A -> T AC=1;AN=168;BQB=0.106249;DP=3865;DP4=1870,1935,14,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.72606e-13;MQSB=0.991217;RPB=0.159056;SGB=-266.874;VDB=0.126347;EFF=UTR_3_PRIME(MODIFIER||1033||507|LOC_Os01g73670|protein_coding|CODING|LOC_Os01g73670.4|10|1),UTR_3_PRIME(MODIFIER||403||550|LOC_Os01g73670|protein_coding|CODING|LOC_Os01g73670.1|11|1),UTR_3_PRIME(MODIFIER||403||546|LOC_Os01g73670|protein_coding|CODING|LOC_Os01g73670.2|11|1),UTR_3_PRIME(MODIFIER||403||539|LOC_Os01g73670|protein_coding|CODING|LOC_Os01g73670.3|10|1) FN2404.SNP.1:42702886 chr01:042702886 0 W/42702886-42702886 FN2404 SNP A -> C AC=1;AN=200;BQB=0.281211;DP=5266;DP4=2436,2492,22,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000189897;MQB=1.50439e-24;MQSB=0.862482;RPB=0.0568146;SGB=1.41385;VDB=0.694773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.1:42703258 chr01:042703258 0 W/42703258-42703258 FN2388 SNP T -> C AC=1;AN=200;BQB=0.999354;DP=5187;DP4=2511,2418,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67941e-15;MQSB=0.833033;RPB=0.772105;SGB=58.1418;VDB=0.330149;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.1:42719341 chr01:042719341 0 W/42719341-42719341 FN1718-S SNP A -> G AC=1;AN=188;BQB=0.871937;DP=3961;DP4=1954,1966,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.14288e-10;MQSB=0.959577;RPB=0.120546;SGB=-67.7293;VDB=0.336374;EFF=INTRON(MODIFIER||||606|LOC_Os01g73750|protein_coding|CODING|LOC_Os01g73750.1|8|1) W138-2-1.SNP.1:42722116 chr01:042722116 0 W/42722116-42722116 W138-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2572-S.SNP.1:42725701 chr01:042725701 0 W/42725701-42725701 FN2572-S SNP A -> T AC=1;AN=198;BQB=0.967221;DP=4178;DP4=2015,1842,26,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.7657e-25;MQSB=0.999653;RPB=0.800805;SGB=155.193;VDB=0.510007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R388S|462|LOC_Os01g73760|protein_coding|CODING|LOC_Os01g73760.1|9|1) FN3846-S.SNP.1:42744668 chr01:042744668 0 W/42744668-42744668 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.889442;DP=3018;DP4=1507,1347,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.36712e-10;MQSB=0.996502;RPB=0.935655;SGB=67.3108;VDB=0.102332;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.1:42750093 chr01:042750093 0 W/42750093-42750093 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2572-S.SNP.1:42761246 chr01:042761246 0 W/42761246-42761246 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.685425;DP=4422;DP4=2009,2048,21,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15302e-20;MQSB=0.913521;RPB=0.997494;SGB=91.6272;VDB=0.616069;EFF=INTRON(MODIFIER||||130|LOC_Os01g73820|protein_coding|CODING|LOC_Os01g73820.1|1|1) FN3664-S.SNP.1:42766057 chr01:042766057 0 W/42766057-42766057 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.715083;DP=2844;DP4=1547,1189,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48024e-07;MQSB=0.9963;RPB=0.778408;SGB=-15.4375;VDB=0.163136;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.1:42767777 chr01:042767777 0 W/42767777-42767777 FN769-S Single Base Substitution A-C INTERGENIC HOMO SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN934-S.SNP.1:42773147 chr01:042773147 0 W/42773147-42773147 FN934-S Single Base Substitution T-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN-156.SNP.1:42779111 chr01:042779111 0 W/42779111-42779111 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2401.SNP.1:42779797 chr01:042779797 0 W/42779797-42779797 FN2401 SNP T -> C AC=1;AN=200;BQB=0.756509;DP=4438;DP4=1855,2189,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.24963e-14;MQSB=0.998966;RPB=0.519109;SGB=-40.4483;VDB=0.449284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.1:42783316 chr01:042783316 0 W/42783316-42783316 FN3559-S SNP A -> G AC=2;AN=188;BQB=0.624953;DP=1683;DP4=1194,334,20,1;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.00857e-12;MQSB=0.337469;RPB=0.849924;SGB=89.8686;VDB=0.684669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.1:42795742 chr01:042795742 0 W/42795742-42795742 FN2499 SNP G -> A AC=1;AN=200;BQB=0.99179;DP=5101;DP4=2228,2431,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00019604;MQB=4.37613e-05;MQSB=0.841242;RPB=0.714538;SGB=29.4541;VDB=0.560105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.1:42802445 chr01:042802445 0 W/42802445-42802445 FN3864-S SNP G -> T AC=2;AN=158;BQB=0.736427;DP=2582;DP4=951,1501,21,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.07652e-16;MQSB=0.999305;RPB=0.543886;SGB=143.195;VDB=0.405319;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.1:42804009 chr01:042804009 0 W/42804009-42804009 FN-61 Single Base Substitution G-A INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN915-S.SNP.1:42812911 chr01:042812911 0 W/42812911-42812911 FN915-S Single Base Substitution G-A INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3681-S.SNP.1:42814949 chr01:042814949 0 W/42814949-42814949 FN3681-S SNP A -> T AC=1;AN=190;BQB=0.999435;DP=2626;DP4=1246,1260,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.76149e-07;MQSB=0.991965;RPB=0.692112;SGB=49.0954;VDB=0.383964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K219I|227|LOC_Os01g73880|protein_coding|CODING|LOC_Os01g73880.1|5|1) FN3761-S.SNP.1:42825433 chr01:042825433 0 W/42825433-42825433 FN3761-S SNP G -> T AC=2;AN=190;BQB=0.844424;DP=2294;DP4=1079,1131,8,4;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=2.74078e-05;MQSB=0.518292;RPB=0.843648;SGB=49.0954;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.1:42835514 chr01:042835514 0 W/42835514-42835514 FN4190-S SNP C -> T AC=1;AN=170;BQB=0.940621;DP=2907;DP4=1509,1314,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=32;MQ0F=0.0880633;MQB=0.811851;MQSB=4.17138e-06;RPB=0.987336;SGB=65.6427;VDB=0.347589;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R235|1082|LOC_Os01g73930|protein_coding|CODING|LOC_Os01g73930.1|3|1) FN879-S.SNP.1:42838885 chr01:042838885 0 W/42838885-42838885 FN879-S Single Base Substitution G-A INTRON HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN1513-S.SNP.1:42867354 chr01:042867354 0 W/42867354-42867354 FN1513-S Single Base Substitution T-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2335.SNP.1:42875654 chr01:042875654 0 W/42875654-42875654 FN2335 SNP A -> T AC=2;AN=192;BQB=0.830001;DP=4428;DP4=2185,1801,22,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.25317e-24;MQSB=0.87406;RPB=0.813426;SGB=208.963;VDB=0.233707;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.1:42879852 chr01:042879852 0 W/42879852-42879852 FN-64 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g74030 pumilio-family RNA binding protein, putative, expressed SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN4142-S.SNP.1:42904916 chr01:042904916 0 W/42904916-42904916 FN4142-S SNP G -> A AC=2;AN=170;BQB=0.842477;DP=1884;DP4=943,780,9,8;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.0859873;MQB=0.981166;MQSB=2.4183e-14;RPB=0.952158;SGB=70.0854;VDB=0.388246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A178T|238|LOC_Os01g74100|protein_coding|CODING|LOC_Os01g74100.1|1|1) FN-269.SNP.1:42904976 chr01:042904976 0 W/42904976-42904976 FN-269 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os01g74100 expressed protein SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3776-S.SNP.1:42905283 chr01:042905283 0 W/42905283-42905283 FN3776-S SNP G -> A AC=1;AN=190;BQB=0.99988;DP=2559;DP4=1390,1052,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0754e-05;MQSB=0.9969;RPB=0.627947;SGB=49.0954;VDB=0.771088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.1:42905345 chr01:042905345 0 W/42905345-42905345 FN2116-S SNP C -> G AC=2;AN=168;BQB=0.615376;DP=2400;DP4=1733,621,25,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.43605e-11;MQSB=0.99842;RPB=0.654024;SGB=-85.3291;VDB=0.276866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.1:42907122 chr01:042907122 0 W/42907122-42907122 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.92747;DP=2520;DP4=1158,1274,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0134921;MQB=0.150624;MQSB=0.340937;RPB=0.953262;SGB=21.8853;VDB=0.401367;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A96|352|LOC_Os01g74110|protein_coding|CODING|LOC_Os01g74110.1|1|1) FN3570-S.SNP.1:42913102 chr01:042913102 0 W/42913102-42913102 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.976836;DP=2649;DP4=1192,1344,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.011325;MQB=0.00714598;MQSB=9.9201e-05;RPB=0.967202;SGB=26.3271;VDB=0.743816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.1:42916986 chr01:042916986 0 W/42916986-42916986 FN3899-S SNP T -> A AC=1;AN=158;BQB=0.999981;DP=2751;DP4=1156,1401,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000194275;MQSB=0.971761;RPB=0.998551;SGB=20.5959;VDB=0.662733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.1:42922737 chr01:042922737 0 W/42922737-42922737 FN3489-S SNP C -> A AC=2;AN=184;BQB=0.992909;DP=2297;DP4=1008,1203,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.00721e-13;MQSB=0.992139;RPB=0.502174;SGB=93.9603;VDB=0.83215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.1:42929695 chr01:042929695 0 W/42929695-42929695 FN2200-S SNP C -> T AC=2;AN=190;BQB=0.999933;DP=3962;DP4=1948,1773,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.07698e-14;MQSB=0.532535;RPB=0.996191;SGB=89.4087;VDB=0.749836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.1:42929700 chr01:042929700 0 W/42929700-42929700 FN2200-S SNP A -> T AC=2;AN=190;BQB=0.440494;DP=3986;DP4=1864,1442,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.69301e-16;MQSB=0.659102;RPB=0.67664;SGB=-6.02158;VDB=0.942381;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.1:42929885 chr01:042929885 0 W/42929885-42929885 FN1624-S Single Base Substitution T-A INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN4112-S.SNP.1:42948537 chr01:042948537 0 W/42948537-42948537 FN4112-S SNP G -> A AC=1;AN=182;BQB=0.946497;DP=2486;DP4=1276,1085,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.45593e-05;MQSB=0.0223449;RPB=0.340063;SGB=35.0899;VDB=0.0340797;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A382|410|LOC_Os01g74140|protein_coding|CODING|LOC_Os01g74140.1|3|1) FN2530-S.SNP.1:42949979 chr01:042949979 0 W/42949979-42949979 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.575501;DP=3630;DP4=1856,1562,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.19904e-07;MQSB=0.432848;RPB=0.967671;SGB=24.1541;VDB=0.512385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A140V|478|LOC_Os01g74146|protein_coding|CODING|LOC_Os01g74146.1|1|1) FN967-S.SNP.1:42951362 chr01:042951362 0 W/42951362-42951362 FN967-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os01g74146 WD repeat-containing protein, putative, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN-397.SNP.1:42958282 chr01:042958282 0 W/42958282-42958282 FN-397 Single Base Substitution G-A INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN476-S.SNP.1:42961648 chr01:042961648 0 W/42961648-42961648 FN476-S Single Base Substitution A-T INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-314.SNP.1:42964179 chr01:042964179 0 W/42964179-42964179 FN-314 Single Base Substitution C-G INTRON HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-314.SNP.1:42964180 chr01:042964180 0 W/42964180-42964180 FN-314 Single Base Substitution T-A INTRON HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN892-S.SNP.1:42964580 chr01:042964580 0 W/42964580-42964580 FN892-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g74160 carboxyl-terminal peptidase, putative, expressed SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN410-S.SNP.1:42965287 chr01:042965287 0 W/42965287-42965287 FN410-S Single Base Substitution A-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN445-S.SNP.1:42966311 chr01:042966311 0 W/42966311-42966311 FN445-S Single Base Substitution A-G INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3752-S.SNP.1:42971437 chr01:042971437 0 W/42971437-42971437 FN3752-S SNP A -> C AC=2;AN=190;BQB=0.916743;DP=2733;DP4=1246,1393,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.91244e-14;MQSB=0.958054;RPB=0.926616;SGB=103.742;VDB=0.392992;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D169A|1090|LOC_Os01g74180|protein_coding|CODING|LOC_Os01g74180.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D45A|966|LOC_Os01g74180|protein_coding|CODING|LOC_Os01g74180.2|2|1) FN3777-S.SNP.1:42976877 chr01:042976877 0 W/42976877-42976877 FN3777-S SNP A -> G AC=2;AN=190;BQB=0.942028;DP=2787;DP4=1358,1306,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.37396e-18;MQSB=0.961714;RPB=0.990693;SGB=121.957;VDB=0.752854;EFF=UTR_3_PRIME(MODIFIER||130||1090|LOC_Os01g74180|protein_coding|CODING|LOC_Os01g74180.1|11|1),UTR_3_PRIME(MODIFIER||130||966|LOC_Os01g74180|protein_coding|CODING|LOC_Os01g74180.2|10|1) FN2356.SNP.1:42977856 chr01:042977856 0 W/42977856-42977856 FN2356 SNP C -> T AC=2;AN=192;BQB=0.238729;DP=4951;DP4=2248,2299,23,29;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=2.00078e-14;MQSB=0.899378;RPB=0.803529;SGB=-164.13;VDB=0.932571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G298E|397|LOC_Os01g74190|protein_coding|CODING|LOC_Os01g74190.1|9|1) FN2433.SNP.1:42978329 chr01:042978329 0 W/42978329-42978329 FN2433 SNP G -> A AC=1;AN=200;BQB=4.42236e-06;DP=2755;DP4=1554,409,10,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=2.54783e-08;MQSB=0.0770767;RPB=0.502517;SGB=-13.7154;VDB=0.0389878;EFF=INTRON(MODIFIER||||397|LOC_Os01g74190|protein_coding|CODING|LOC_Os01g74190.1|7|1) FN_769-4-1.SNP.1:42978329 chr01:042978329 0 W/42978329-42978329 FN_769-4-1 Single Base Substitution G-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN3090-S.SNP.1:42986631 chr01:042986631 0 W/42986631-42986631 FN3090-S SNP A -> G AC=1;AN=184;BQB=0.978046;DP=2570;DP4=1095,1402,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01948e-05;MQSB=0.234131;RPB=0.849379;SGB=48.7425;VDB=0.954067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.1:43015889 chr01:043015889 0 W/43015889-43015889 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2224-S.SNP.1:43015895 chr01:043015895 0 W/43015895-43015895 FN2224-S SNP T -> C AC=2;AN=190;BQB=0.366983;DP=4480;DP4=2215,1882,28,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.37151e-24;MQSB=0.025756;RPB=0.77951;SGB=-112.38;VDB=0.572142;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.1:43024685 chr01:043024685 0 W/43024685-43024685 FN-246 Single Base Substitution A-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2302.SNP.1:43024685 chr01:043024685 0 W/43024685-43024685 FN2302 SNP A -> T AC=2;AN=192;BQB=0.00353737;DP=5227;DP4=2214,2495,31,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.84732e-33;MQSB=0.0383631;RPB=0.990635;SGB=73.0574;VDB=0.00973014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.1:43024685 chr01:043024685 0 W/43024685-43024685 FN2708-S SNP A -> T AC=2;AN=200;BQB=0.391766;DP=5056;DP4=2261,2473,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.57462e-20;MQSB=0.00996024;RPB=0.992786;SGB=160.183;VDB=0.226999;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.1:43024685 chr01:043024685 0 W/43024685-43024685 FN704-S Single Base Substitution A-T INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN757-S.SNP.1:43024685 chr01:043024685 0 W/43024685-43024685 FN757-S Single Base Substitution A-T INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN4111-S.SNP.1:43048045 chr01:043048045 0 W/43048045-43048045 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.590887;DP=2561;DP4=1076,1422,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0;MQB=1.31354e-07;MQSB=0.848404;RPB=0.306081;SGB=67.2255;VDB=0.686955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.1:43057609 chr01:043057609 0 W/43057609-43057609 FN2637-S SNP A -> T AC=1;AN=200;BQB=0.995735;DP=4799;DP4=2377,2203,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60793e-11;MQSB=0.991815;RPB=0.623959;SGB=51.0851;VDB=0.976775;EFF=INTRON(MODIFIER||||762|LOC_Os01g74310|protein_coding|CODING|LOC_Os01g74310.1|3|1),INTRON(MODIFIER||||761|LOC_Os01g74310|protein_coding|CODING|LOC_Os01g74310.2|3|1),INTRON(MODIFIER||||761|LOC_Os01g74310|protein_coding|CODING|LOC_Os01g74310.3|3|1),INTRON(MODIFIER||||761|LOC_Os01g74310|protein_coding|CODING|LOC_Os01g74310.4|3|1) FN2535-S.SNP.1:43063476 chr01:043063476 0 W/43063476-43063476 FN2535-S SNP A -> C AC=2;AN=198;BQB=0.555846;DP=3871;DP4=1790,1881,15,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.30703e-18;MQSB=0.885159;RPB=0.916591;SGB=127.666;VDB=0.746322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.1:43063477 chr01:043063477 0 W/43063477-43063477 FN2535-S SNP C -> A AC=2;AN=198;BQB=0.964077;DP=3869;DP4=1788,1837,15,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.14762e-19;MQSB=0.917833;RPB=0.984843;SGB=97.671;VDB=0.776344;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.1:43074558 chr01:043074558 0 W/43074558-43074558 FN391-S Single Base Substitution A-T INTRON HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1206-S.SNP.1:43081306 chr01:043081306 0 W/43081306-43081306 FN1206-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN_N1-119-1.SNP.1:43081393 chr01:043081393 0 W/43081393-43081393 FN_N1-119-1 Single Base Substitution C-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2444.SNP.1:43083800 chr01:043083800 0 W/43083800-43083800 FN2444 SNP G -> T AC=1;AN=200;BQB=0.991797;DP=5561;DP4=3032,2114,12,20;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.236648;MQB=0.0546441;MQSB=0;RPB=0.969679;SGB=-41.238;VDB=0.905796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.1:43083944 chr01:043083944 0 W/43083944-43083944 FN3432-S SNP G -> T AC=1;AN=184;BQB=0.0618717;DP=2948;DP4=1246,1558,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0522388;MQB=2.7381e-05;MQSB=1.80833e-12;RPB=0.0355624;SGB=-216.758;VDB=0.998873;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.1:43085857 chr01:043085857 0 W/43085857-43085857 FN672-S Single Base Substitution T-A INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3769-S.SNP.1:43088136 chr01:043088136 0 W/43088136-43088136 FN3769-S SNP A -> G AC=1;AN=190;BQB=0.93897;DP=3253;DP4=1239,1840,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000307409;MQB=6.44362e-05;MQSB=0.0226514;RPB=0.163659;SGB=15.9981;VDB=0.209801;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G290|736|LOC_Os01g74390|protein_coding|CODING|LOC_Os01g74390.1|6|1) FN3763-S.SNP.1:43095878 chr01:043095878 0 W/43095878-43095878 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.957828;DP=2937;DP4=1201,1634,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.83884e-05;MQSB=0.917801;RPB=0.973227;SGB=35.4339;VDB=0.923911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.1:43100387 chr01:043100387 0 W/43100387-43100387 FN2441 SNP C -> T AC=2;AN=200;BQB=0.505205;DP=4907;DP4=2357,2240,29,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.44493e-35;MQSB=0.775948;RPB=0.982565;SGB=84.9329;VDB=0.446648;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.1:43113910 chr01:043113910 0 W/43113910-43113910 FN-210 Single Base Substitution A-G INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN1068-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN1068-S Single Base Substitution A-G INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1763-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN1763-S SNP A -> G AC=2;AN=188;BQB=0.00671296;DP=3622;DP4=1680,1868,26,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.92726e-14;MQSB=0.98707;RPB=0.682329;SGB=-274.645;VDB=0.921086;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN282-S Single Base Substitution A-G INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3311-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN3311-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3863-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN3863-S SNP A -> G AC=2;AN=158;BQB=0.887458;DP=2472;DP4=1156,1186,15,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.82105e-13;MQSB=0.990293;RPB=0.701544;SGB=103.87;VDB=0.617305;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN4098-S SNP A -> G AC=1;AN=182;BQB=0.839859;DP=3123;DP4=1495,1518,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.30762e-11;MQSB=0.977816;RPB=0.535214;SGB=75.6874;VDB=0.286472;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN511-S Single Base Substitution A-G INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN530-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN530-S Single Base Substitution A-G INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN752-S.SNP.1:43140227 chr01:043140227 0 W/43140227-43140227 FN752-S Single Base Substitution A-G INTERGENIC HOMO SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2314.SNP.1:43151205 chr01:043151205 0 W/43151205-43151205 FN2314 SNP A -> G AC=1;AN=192;BQB=0.992777;DP=5056;DP4=1969,2647,4,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197785;MQB=5.70236e-07;MQSB=0.61827;RPB=0.162493;SGB=23.7852;VDB=0.60546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.1:43153040 chr01:043153040 0 W/43153040-43153040 FN2742-S SNP G -> T AC=1;AN=200;BQB=0.154307;DP=4978;DP4=2411,2278,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2356e-16;MQSB=0.929648;RPB=0.950374;SGB=52.9314;VDB=0.205876;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.1:43155966 chr01:043155966 0 W/43155966-43155966 FN670-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os01g74510 KIP1, putative, expressed SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3805-S.SNP.1:43164076 chr01:043164076 0 W/43164076-43164076 FN3805-S SNP T -> C AC=1;AN=190;BQB=0.988499;DP=2654;DP4=1313,1222,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.67015e-10;MQSB=0.993297;RPB=0.994222;SGB=31.3213;VDB=0.544174;EFF=INTRON(MODIFIER||||376|LOC_Os01g74530|protein_coding|CODING|LOC_Os01g74530.2|4|1) FN3776-S.SNP.1:43164652 chr01:043164652 0 W/43164652-43164652 FN3776-S SNP A -> T AC=1;AN=190;BQB=0.500897;DP=2554;DP4=1184,1260,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000116557;MQSB=0.991867;RPB=0.335024;SGB=15.9981;VDB=0.316685;EFF=INTRON(MODIFIER||||376|LOC_Os01g74530|protein_coding|CODING|LOC_Os01g74530.2|3|1) FN4260-S.SNP.1:43165792 chr01:043165792 0 W/43165792-43165792 FN4260-S SNP G -> A AC=2;AN=170;BQB=0.490435;DP=2506;DP4=1227,1184,25,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.3543e-24;MQSB=0.995425;RPB=0.87558;SGB=138.716;VDB=0.94726;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G149|376|LOC_Os01g74530|protein_coding|CODING|LOC_Os01g74530.2|2|1) FN4135-S.SNP.1:43172145 chr01:043172145 0 W/43172145-43172145 FN4135-S SNP T -> C AC=1;AN=182;BQB=0.927866;DP=2807;DP4=1312,1401,9,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.49687e-08;MQSB=0.935792;RPB=0.770168;SGB=35.6277;VDB=0.456033;EFF=UTR_3_PRIME(MODIFIER||299||142|LOC_Os01g74540|protein_coding|CODING|LOC_Os01g74540.1|2|1) FN3802-S.SNP.1:43173784 chr01:043173784 0 W/43173784-43173784 FN3802-S SNP G -> T AC=2;AN=190;BQB=0.906453;DP=2927;DP4=1407,1341,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.94123e-13;MQSB=0.938653;RPB=0.597168;SGB=71.6393;VDB=0.24343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.1:43183354 chr01:043183354 0 W/43183354-43183354 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.1:43183354 chr01:043183354 0 W/43183354-43183354 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.768463;DP=1608;DP4=670,879,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.11805e-05;MQSB=0.991966;RPB=0.939272;SGB=28.8977;VDB=0.113567;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.1:43184849 chr01:043184849 0 W/43184849-43184849 FN453-S Single Base Substitution A-T INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN4066-S.SNP.1:43185494 chr01:043185494 0 W/43185494-43185494 FN4066-S SNP C -> T AC=1;AN=168;BQB=0.842518;DP=2241;DP4=1084,1068,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13569e-06;MQSB=0.946935;RPB=0.469916;SGB=10.0307;VDB=0.436394;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.1:43193682 chr01:043193682 0 W/43193682-43193682 FN-116 Single Base Substitution C-T INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN1549-S.SNP.1:43196110 chr01:043196110 0 W/43196110-43196110 FN1549-S Single Base Substitution A-T INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3771-S.SNP.1:43211296 chr01:043211296 0 W/43211296-43211296 FN3771-S SNP T -> C AC=2;AN=190;BQB=0.953771;DP=2256;DP4=1191,951,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.04984e-13;MQSB=0.00315433;RPB=0.832969;SGB=49.1985;VDB=0.0161368;EFF=INTRON(MODIFIER||||1921|LOC_Os01g74610|protein_coding|CODING|LOC_Os01g74610.1|6|1) FN2141-S.SNP.1:43223824 chr01:043223824 0 W/43223824-43223824 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.136535;DP=3336;DP4=1442,1842,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.9238e-08;MQSB=0.990983;RPB=0.123395;SGB=-40.6433;VDB=0.392375;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.1:43224110 chr01:043224110 0 W/43224110-43224110 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.262966;DP=4058;DP4=1970,1867,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.70552e-10;MQSB=0.963611;RPB=0.577013;SGB=37.1297;VDB=0.232344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.1:43224795 chr01:043224795 0 W/43224795-43224795 FN2681-S SNP G -> T AC=1;AN=200;BQB=0.683631;DP=4824;DP4=2346,2054,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15067e-14;MQSB=0.499783;RPB=0.635355;SGB=52.9314;VDB=0.647349;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.1:43226685 chr01:043226685 0 W/43226685-43226685 FN1116-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN4255-S.SNP.1:43227405 chr01:043227405 0 W/43227405-43227405 FN4255-S SNP T -> A AC=1;AN=170;BQB=0.861245;DP=2567;DP4=1140,1286,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.42485e-07;MQSB=0.879674;RPB=0.909349;SGB=45.206;VDB=0.5;EFF=INTRON(MODIFIER||||293|LOC_Os01g74640|protein_coding|CODING|LOC_Os01g74640.1|4|1),INTRON(MODIFIER||||278|LOC_Os01g74640|protein_coding|CODING|LOC_Os01g74640.2|4|1),INTRON(MODIFIER||||241|LOC_Os01g74640|protein_coding|CODING|LOC_Os01g74640.3|4|1) FN2592-S.SNP.1:43234490 chr01:043234490 0 W/43234490-43234490 FN2592-S SNP G -> A AC=1;AN=198;BQB=0.874614;DP=3723;DP4=1836,1626,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00339e-08;MQSB=0.0143553;RPB=0.994151;SGB=50.9344;VDB=0.999857;EFF=INTRON(MODIFIER||||412|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.1|7|1),INTRON(MODIFIER||||395|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.2|7|1),INTRON(MODIFIER||||394|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.3|7|1) FN2104-S.SNP.1:43235841 chr01:043235841 0 W/43235841-43235841 FN2104-S SNP C -> A AC=1;AN=168;BQB=0.0909127;DP=4213;DP4=2396,1788,15,5;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=9.07181e-06;MQSB=5.32175e-22;RPB=0.118478;SGB=-63.3606;VDB=0.211072;EFF=INTRON(MODIFIER||||395|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.2|3|1),INTRON(MODIFIER||||394|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.3|3|1),INTRON(MODIFIER||||412|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.1|3|1) FN3823-S.SNP.1:43235841 chr01:043235841 0 W/43235841-43235841 FN3823-S SNP C -> A AC=1;AN=190;BQB=0.786647;DP=2616;DP4=1136,1369,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.87886e-08;MQSB=2.12289e-05;RPB=0.97507;SGB=76.4186;VDB=0.713528;EFF=INTRON(MODIFIER||||395|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.2|3|1),INTRON(MODIFIER||||394|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.3|3|1),INTRON(MODIFIER||||412|LOC_Os01g74650|protein_coding|CODING|LOC_Os01g74650.1|3|1) FN3553-S.SNP.1:43239143 chr01:043239143 0 W/43239143-43239143 FN3553-S SNP C -> T AC=2;AN=188;BQB=0.624105;DP=3053;DP4=1899,1084,19,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.14312e-13;MQSB=0.99147;RPB=0.930762;SGB=121.672;VDB=0.295216;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.1:43239823 chr01:043239823 0 W/43239823-43239823 FN4047-S SNP C -> A AC=2;AN=168;BQB=0.98668;DP=3097;DP4=1262,1727,16,19;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=1.24017e-13;MQSB=0.87637;RPB=0.978447;SGB=110.226;VDB=0.0188418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.1:43243633 chr01:043243633 0 W/43243633-43243633 FN2183-S SNP C -> G AC=1;AN=190;BQB=0.295922;DP=4864;DP4=2078,2395,10,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81236e-18;MQSB=0.997934;RPB=0.970981;SGB=144.727;VDB=0.055804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.1:43245162 chr01:043245162 0 W/43245162-43245162 FN-269 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os01g74660 dihydroflavonol-4-reductase, putative, expressed SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3538-S.SNP.1:43259507 chr01:043259507 0 W/43259507-43259507 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.947228;DP=4832;DP4=2514,2261,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=25;MQ0F=0.112169;MQB=0.22725;MQSB=1.44177e-15;RPB=0.800095;SGB=2.45162;VDB=0.965941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D630N|1817|LOC_Os01g74680|protein_coding|CODING|LOC_Os01g74680.1|1|1) FN888-S.SNP.2:1926 chr02:000001926 0 W/1926-1926 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3791-S.SNP.2:6944 chr02:000006944 0 W/6944-6944 FN3791-S SNP A -> G AC=1;AN=190;BQB=0.845262;DP=3325;DP4=1502,1652,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82598e-12;MQSB=0.999434;RPB=0.992223;SGB=57.4238;VDB=0.455559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F311L|563|LOC_Os02g01010|protein_coding|CODING|LOC_Os02g01010.1|5|1) FN3757-S.SNP.2:10875 chr02:000010875 0 W/10875-10875 FN3757-S SNP T -> A AC=1;AN=190;BQB=0.98934;DP=2804;DP4=1378,1345,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28929e-08;MQSB=0.973586;RPB=0.817472;SGB=36.1006;VDB=0.42097;EFF=UTR_3_PRIME(MODIFIER||133||801|LOC_Os02g01020|protein_coding|CODING|LOC_Os02g01020.2|3|1),INTRON(MODIFIER||||849|LOC_Os02g01020|protein_coding|CODING|LOC_Os02g01020.1|3|1) FN3798-S.SNP.2:14273 chr02:000014273 0 W/14273-14273 FN3798-S SNP C -> A AC=1;AN=190;BQB=0.905133;DP=2750;DP4=1364,1280,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.25872e-09;MQSB=0.932097;RPB=0.993097;SGB=46.7622;VDB=0.559415;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L42|409|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L42|384|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.3|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L42|374|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.4|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L42|408|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.2|1|1) FN3475-S.SNP.2:14835 chr02:000014835 0 W/14835-14835 FN3475-S SNP T -> C AC=1;AN=184;BQB=0.938801;DP=3013;DP4=1490,1393,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.59853e-09;MQSB=0.926167;RPB=0.968;SGB=53.3568;VDB=0.937004;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L152|409|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L151|408|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L152|384|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L152|374|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.4|4|1) FN775-S.SNP.2:17170 chr02:000017170 0 W/17170-17170 FN775-S Single Base Substitution A-T INTRON HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3396-S.SNP.2:17623 chr02:000017623 0 W/17623-17623 FN3396-S SNP T -> A AC=2;AN=184;BQB=0.954995;DP=2769;DP4=1453,1212,18,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.08874e-12;MQSB=0.200215;RPB=0.232703;SGB=85.0529;VDB=0.135152;EFF=INTRON(MODIFIER||||409|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.1|9|1),INTRON(MODIFIER||||408|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.2|9|1),INTRON(MODIFIER||||374|LOC_Os02g01030|protein_coding|CODING|LOC_Os02g01030.4|8|1) FN1536-S.SNP.2:28988 chr02:000028988 0 W/28988-28988 FN1536-S Single Base Substitution G-A INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN4106-S.SNP.2:31876 chr02:000031876 0 W/31876-31876 FN4106-S SNP A -> G AC=1;AN=182;BQB=0.989413;DP=2780;DP4=1409,1307,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.25383e-07;MQSB=0.501214;RPB=0.913786;SGB=53.1331;VDB=0.897475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:42788 chr02:000042788 0 W/42788-42788 FN2417 SNP G -> A AC=1;AN=200;BQB=0.837255;DP=4321;DP4=2077,2054,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.44608e-10;MQSB=0.835527;RPB=0.723894;SGB=77.2904;VDB=0.429687;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L343|354|LOC_Os02g01080|protein_coding|CODING|LOC_Os02g01080.1|1|1) FN3903-S.SNP.2:43897 chr02:000043897 0 W/43897-43897 FN3903-S SNP T -> C AC=1;AN=158;BQB=0.777996;DP=2315;DP4=1085,983,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.44011e-06;MQSB=0.910628;RPB=0.339939;SGB=27.3346;VDB=0.209865;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.2:44287 chr02:000044287 0 W/44287-44287 FN756-S Single Base Substitution C-A INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN547-S.SNP.2:44740 chr02:000044740 0 W/44740-44740 FN547-S Single Base Substitution T-C INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3692-S.SNP.2:46527 chr02:000046527 0 W/46527-46527 FN3692-S SNP T -> C AC=1;AN=190;BQB=0.999953;DP=3109;DP4=1611,1345,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11148e-05;MQSB=0.608271;RPB=0.834304;SGB=28.9929;VDB=0.230033;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.2:52741 chr02:000052741 0 W/52741-52741 FN4071-S SNP A -> G AC=1;AN=182;BQB=0.777963;DP=2850;DP4=1496,1286,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.26409e-06;MQSB=0.996204;RPB=0.999826;SGB=32.1169;VDB=0.190928;EFF=INTRON(MODIFIER||||574|LOC_Os02g01100|protein_coding|CODING|LOC_Os02g01100.1|5|1),INTRON(MODIFIER||||571|LOC_Os02g01100|protein_coding|CODING|LOC_Os02g01100.2|6|1),INTRON(MODIFIER||||571|LOC_Os02g01100|protein_coding|CODING|LOC_Os02g01100.3|5|1) FN2107-S.SNP.2:57999 chr02:000057999 0 W/57999-57999 FN2107-S SNP T -> A AC=1;AN=168;BQB=0.596394;DP=4097;DP4=2072,2000,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.24079e-06;MQSB=0.987673;RPB=0.943565;SGB=4.1907;VDB=0.51626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.2:62408 chr02:000062408 0 W/62408-62408 FN3992-S SNP A -> G AC=1;AN=168;BQB=0.954192;DP=2531;DP4=1129,1294,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.56557e-08;MQSB=0.992658;RPB=0.832932;SGB=47.7421;VDB=0.454942;EFF=INTRON(MODIFIER||||519|LOC_Os02g01110|protein_coding|CODING|LOC_Os02g01110.1|6|1) FN2155-S.SNP.2:68146 chr02:000068146 0 W/68146-68146 FN2155-S SNP T -> C AC=2;AN=168;BQB=0.01485;DP=3663;DP4=1906,1706,18,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.9521e-16;MQSB=0.994133;RPB=0.713961;SGB=41.3919;VDB=0.539613;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.2:68919 chr02:000068919 0 W/68919-68919 FN3867-S SNP A -> G AC=1;AN=158;BQB=0.995666;DP=2465;DP4=1265,1089,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.55068e-07;MQSB=0.999502;RPB=0.327182;SGB=47.0672;VDB=0.0335384;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.2:68919 chr02:000068919 0 W/68919-68919 FN426-S Single Base Substitution A-G INTERGENIC HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN476-S.SNP.2:68919 chr02:000068919 0 W/68919-68919 FN476-S Single Base Substitution A-G INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1152-S.SNP.2:71868 chr02:000071868 0 W/71868-71868 FN1152-S Single Base Substitution C-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2183-S.SNP.2:73021 chr02:000073021 0 W/73021-73021 FN2183-S SNP T -> C AC=2;AN=190;BQB=0.942225;DP=4410;DP4=1721,1898,36,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.58275e-28;MQSB=0.000230955;RPB=0.285478;SGB=91.5178;VDB=0.413397;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.2:75568 chr02:000075568 0 W/75568-75568 FN2479 SNP T -> C AC=2;AN=200;BQB=0.892702;DP=4869;DP4=1966,2523,22,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.82912e-28;MQSB=0.789681;RPB=0.374545;SGB=170.056;VDB=0.093022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.2:76110 chr02:000076110 0 W/76110-76110 FN3630-S SNP T -> A AC=1;AN=190;BQB=0.705274;DP=2894;DP4=1365,1440,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000139645;MQSB=0.885278;RPB=0.787374;SGB=10.8904;VDB=0.755656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.2:85012 chr02:000085012 0 W/85012-85012 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.793462;DP=2994;DP4=1274,1526,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.89683e-14;MQSB=0.726743;RPB=0.909484;SGB=82.301;VDB=0.402677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.2:85362 chr02:000085362 0 W/85362-85362 FN1065-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN465-S.SNP.2:87940 chr02:000087940 0 W/87940-87940 FN465-S Single Base Substitution A-T INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3526-S.SNP.2:90799 chr02:000090799 0 W/90799-90799 FN3526-S SNP C -> T AC=2;AN=188;BQB=0.839947;DP=2481;DP4=1106,1302,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.94037e-10;MQSB=0.999988;RPB=0.989621;SGB=80.782;VDB=0.825672;EFF=INTRON(MODIFIER||||819|LOC_Os02g01170|protein_coding|CODING|LOC_Os02g01170.1|1|1) FN2499.SNP.2:101419 chr02:000101419 0 W/101419-101419 FN2499 SNP A -> T AC=1;AN=200;BQB=0.99315;DP=5157;DP4=2566,2251,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8159e-08;MQSB=0.716898;RPB=0.187535;SGB=43.8747;VDB=0.799082;EFF=INTRON(MODIFIER||||919|LOC_Os02g01180|protein_coding|CODING|LOC_Os02g01180.1|13|1),INTRON(MODIFIER||||652|LOC_Os02g01180|protein_coding|CODING|LOC_Os02g01180.2|13|1) FN2475.SNP.2:105116 chr02:000105116 0 W/105116-105116 FN2475 SNP G -> A AC=1;AN=200;BQB=0.335188;DP=4978;DP4=2540,2171,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200884;MQB=2.72367e-12;MQSB=0.991201;RPB=0.875442;SGB=-38.4742;VDB=0.709718;EFF=INTRON(MODIFIER||||919|LOC_Os02g01180|protein_coding|CODING|LOC_Os02g01180.1|8|1),INTRON(MODIFIER||||652|LOC_Os02g01180|protein_coding|CODING|LOC_Os02g01180.2|8|1) FN2470.SNP.2:114594 chr02:000114594 0 W/114594-114594 FN2470 SNP G -> A AC=1;AN=200;BQB=0.470576;DP=3931;DP4=1465,2085,6,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.99337e-07;MQSB=0.00564187;RPB=0.247652;SGB=47.7211;VDB=0.566267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.2:115824 chr02:000115824 0 W/115824-115824 FN1455-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1476-S.SNP.2:115824 chr02:000115824 0 W/115824-115824 FN1476-S Single Base Substitution A-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2673-S.SNP.2:115824 chr02:000115824 0 W/115824-115824 FN2673-S SNP A -> T AC=1;AN=200;BQB=0.690444;DP=4682;DP4=2356,2191,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.27379e-14;MQSB=0.969923;RPB=0.574305;SGB=76.3213;VDB=0.0307703;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.2:115824 chr02:000115824 0 W/115824-115824 FN760-S Single Base Substitution A-T INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2129-S.SNP.2:118722 chr02:000118722 0 W/118722-118722 FN2129-S SNP T -> C AC=1;AN=168;BQB=0.453399;DP=1824;DP4=681,1101,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00164474;MQB=4.64753e-09;MQSB=0.878972;RPB=0.989596;SGB=56.2162;VDB=0.177555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.2:128555 chr02:000128555 0 W/128555-128555 FN1272-S Single Base Substitution C-T INTRON HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN3439-S.SNP.2:129049 chr02:000129049 0 W/129049-129049 FN3439-S SNP G -> T AC=1;AN=184;BQB=0.966863;DP=2793;DP4=1377,1354,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.94962e-10;MQSB=0.989199;RPB=0.983389;SGB=62.3078;VDB=0.528562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T331K|501|LOC_Os02g01230|protein_coding|CODING|LOC_Os02g01230.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T331K|501|LOC_Os02g01230|protein_coding|CODING|LOC_Os02g01230.2|2|1) FN1336-S.SNP.2:132107 chr02:000132107 0 W/132107-132107 FN1336-S Single Base Substitution G-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3859-S.SNP.2:135171 chr02:000135171 0 W/135171-135171 FN3859-S SNP C -> T AC=1;AN=158;BQB=0.999007;DP=2515;DP4=1214,1204,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.80468e-08;MQSB=0.986368;RPB=0.825321;SGB=16.7104;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.2:137440 chr02:000137440 0 W/137440-137440 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.963704;DP=4530;DP4=2159,2139,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93974e-07;MQSB=0.999977;RPB=0.875995;SGB=49.6594;VDB=0.862011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A108T|132|LOC_Os02g01250|protein_coding|CODING|LOC_Os02g01250.1|3|1) FN2689-S.SNP.2:137441 chr02:000137441 0 W/137441-137441 FN2689-S SNP A -> T AC=1;AN=200;BQB=0.92145;DP=4533;DP4=2153,2183,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.69814e-06;MQSB=0.991382;RPB=0.909085;SGB=33.0593;VDB=0.855219;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V107|132|LOC_Os02g01250|protein_coding|CODING|LOC_Os02g01250.1|3|1) FN1231-S.SNP.2:138232 chr02:000138232 0 W/138232-138232 FN1231-S Single Base Substitution G-A INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN3938-S.SNP.2:147038 chr02:000147038 0 W/147038-147038 FN3938-S SNP A -> G AC=1;AN=158;BQB=0.708532;DP=1793;DP4=568,1062,2,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.09534e-06;MQSB=0.742102;RPB=0.842981;SGB=14.3409;VDB=0.815244;EFF=INTRON(MODIFIER||||804|LOC_Os02g01270|protein_coding|CODING|LOC_Os02g01270.1|1|1) FN4002-S.SNP.2:156474 chr02:000156474 0 W/156474-156474 FN4002-S SNP A -> C AC=2;AN=168;BQB=0.917442;DP=2748;DP4=1262,1365,18,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.92414e-17;MQSB=0.369587;RPB=0.579253;SGB=136.358;VDB=0.119768;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.2:159179 chr02:000159179 0 W/159179-159179 FN-61 Single Base Substitution T-A INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3484-S.SNP.2:162710 chr02:000162710 0 W/162710-162710 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.460615;DP=2312;DP4=1172,1059,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.11485e-07;MQSB=0.973619;RPB=0.770051;SGB=32.2261;VDB=0.495162;EFF=INTRON(MODIFIER||||598|LOC_Os02g01280|protein_coding|CODING|LOC_Os02g01280.1|12|1) FN3484-S.SNP.2:162712 chr02:000162712 0 W/162712-162712 FN3484-S SNP A -> T AC=1;AN=184;BQB=0.104115;DP=2320;DP4=1188,1058,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93555e-07;MQSB=0.95084;RPB=0.378562;SGB=18.2315;VDB=0.470855;EFF=INTRON(MODIFIER||||598|LOC_Os02g01280|protein_coding|CODING|LOC_Os02g01280.1|12|1) FN3425-S.SNP.2:163406 chr02:000163406 0 W/163406-163406 FN3425-S SNP G -> A AC=2;AN=184;BQB=0.909689;DP=2692;DP4=1295,1262,24,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.53246e-22;MQSB=0.921171;RPB=0.832371;SGB=120.271;VDB=0.523214;EFF=UTR_3_PRIME(MODIFIER||453||156|LOC_Os02g01290|protein_coding|CODING|LOC_Os02g01290.1|1|1),UTR_3_PRIME(MODIFIER||76||598|LOC_Os02g01280|protein_coding|CODING|LOC_Os02g01280.1|15|1) FN3427-S.SNP.2:165464 chr02:000165464 0 W/165464-165464 FN3427-S SNP T -> G AC=2;AN=184;BQB=0.999901;DP=3187;DP4=1524,1561,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.217e-15;MQSB=0.93211;RPB=0.802177;SGB=103.004;VDB=0.983523;EFF=INTERGENIC(MODIFIER||||||||||1) FN574-S.SNP.2:166501 chr02:000166501 0 W/166501-166501 FN574-S Single Base Substitution C-T INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2480.SNP.2:183791 chr02:000183791 0 W/183791-183791 FN2480 SNP T -> G AC=1;AN=200;BQB=0.0664089;DP=4249;DP4=1681,2056,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36773e-08;MQSB=0.972377;RPB=0.295165;SGB=-59.7054;VDB=0.127902;EFF=UTR_3_PRIME(MODIFIER||45||366|LOC_Os02g01340|protein_coding|CODING|LOC_Os02g01340.2|4|1),UTR_3_PRIME(MODIFIER||97||376|LOC_Os02g01340|protein_coding|CODING|LOC_Os02g01340.1|3|1) FN3976-S.SNP.2:185979 chr02:000185979 0 W/185979-185979 FN3976-S SNP T -> A AC=2;AN=168;BQB=0.997645;DP=2681;DP4=1244,1304,11,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.47027e-10;MQSB=0.193935;RPB=0.288142;SGB=65.6253;VDB=0.0011552;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.2:187907 chr02:000187907 0 W/187907-187907 FN239-S Single Base Substitution A-G INTRON HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2673-S.SNP.2:192402 chr02:000192402 0 W/192402-192402 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.0779103;DP=3492;DP4=1736,1473,7,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0687285;MQB=0.834716;MQSB=0;RPB=0.822712;SGB=24.2746;VDB=0.986173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.2:195610 chr02:000195610 0 W/195610-195610 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.753862;DP=2731;DP4=1535,972,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.84879e-07;MQSB=0.940504;RPB=0.519984;SGB=17.3231;VDB=0.329782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.2:206360 chr02:000206360 0 W/206360-206360 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.977642;DP=2451;DP4=1130,1253,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.1705e-07;MQSB=0.999808;RPB=0.996869;SGB=53.2642;VDB=0.396446;EFF=START_GAINED(LOW||||223|LOC_Os02g01360|protein_coding|CODING|LOC_Os02g01360.1|2|1),UTR_5_PRIME(MODIFIER||190||223|LOC_Os02g01360|protein_coding|CODING|LOC_Os02g01360.1|2|1),INTRON(MODIFIER||||483|LOC_Os02g01365|protein_coding|CODING|LOC_Os02g01365.1|7|1) FN2334.SNP.2:215408 chr02:000215408 0 W/215408-215408 FN2334 SNP T -> A AC=1;AN=192;BQB=0.924152;DP=5052;DP4=2714,2106,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.72624e-09;MQSB=0.82017;RPB=0.053114;SGB=67.4678;VDB=0.0170033;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.2:217496 chr02:000217496 0 W/217496-217496 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2360.SNP.2:219397 chr02:000219397 0 W/219397-219397 FN2360 SNP C -> T AC=1;AN=192;BQB=0.9934;DP=5506;DP4=2580,2457,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00018162;MQB=1.2717e-17;MQSB=0.964834;RPB=0.99819;SGB=-42.7339;VDB=0.907222;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.2:222955 chr02:000222955 0 W/222955-222955 FN598-S Single Base Substitution A-G INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN1129-S.SNP.2:223638 chr02:000223638 0 W/223638-223638 FN1129-S Single Base Substitution A-G INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2765-S.SNP.2:224636 chr02:000224636 0 W/224636-224636 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.68423;DP=3876;DP4=1746,1943,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.90684e-12;MQSB=0.886202;RPB=0.91211;SGB=65.3149;VDB=0.64487;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.2:228053 chr02:000228053 0 W/228053-228053 W278-3-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2327.SNP.2:229620 chr02:000229620 0 W/229620-229620 FN2327 SNP C -> G AC=1;AN=192;BQB=0.970817;DP=3682;DP4=1674,1650,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=25;MQ0F=0.265888;MQB=0.531311;MQSB=0;RPB=0.751306;SGB=28.9139;VDB=0.739897;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.2:246277 chr02:000246277 0 W/246277-246277 FN887-S Single Base Substitution T-A INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2205-S.SNP.2:262791 chr02:000262791 0 W/262791-262791 FN2205-S SNP T -> C AC=1;AN=190;BQB=0.907651;DP=4950;DP4=2471,2217,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05535e-15;MQSB=0.117217;RPB=0.714388;SGB=108.296;VDB=0.234315;EFF=SPLICE_SITE_REGION(LOW||||547|LOC_Os02g01440|protein_coding|CODING|LOC_Os02g01440.1|5|1),INTRON(MODIFIER||||547|LOC_Os02g01440|protein_coding|CODING|LOC_Os02g01440.1|5|1) FN4258-S.SNP.2:284639 chr02:000284639 0 W/284639-284639 FN4258-S SNP G -> A AC=1;AN=170;BQB=0.602136;DP=2671;DP4=1332,1255,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.71267e-05;MQSB=0.941386;RPB=0.795002;SGB=21.1076;VDB=0.110731;EFF=INTRON(MODIFIER||||1514|LOC_Os02g01490|protein_coding|CODING|LOC_Os02g01490.1|10|1) FN2536-S.SNP.2:284857 chr02:000284857 0 W/284857-284857 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.980969;DP=4279;DP4=2110,1937,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.69721e-09;MQSB=0.929494;RPB=0.94501;SGB=67.9293;VDB=0.87598;EFF=INTRON(MODIFIER||||1514|LOC_Os02g01490|protein_coding|CODING|LOC_Os02g01490.1|11|1) FN3311-S.SNP.2:284955 chr02:000284955 0 W/284955-284955 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.934879;DP=2882;DP4=1519,1270,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.262e-11;MQSB=0.841347;RPB=0.62512;SGB=56.8786;VDB=0.0815142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E1264K|1514|LOC_Os02g01490|protein_coding|CODING|LOC_Os02g01490.1|12|1) FN2625-S.SNP.2:285142 chr02:000285142 0 W/285142-285142 FN2625-S SNP G -> T AC=1;AN=200;BQB=0.774489;DP=5066;DP4=2186,2617,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.72149e-19;MQSB=0.990225;RPB=0.925866;SGB=105.163;VDB=0.908821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R1326L|1514|LOC_Os02g01490|protein_coding|CODING|LOC_Os02g01490.1|12|1) FN3889-S.SNP.2:293548 chr02:000293548 0 W/293548-293548 FN3889-S SNP C -> T AC=1;AN=158;BQB=0.995962;DP=2983;DP4=1457,1392,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.92818e-10;MQSB=0.892124;RPB=0.815435;SGB=47.5512;VDB=0.796054;EFF=UTR_3_PRIME(MODIFIER||82||548|LOC_Os02g01500|protein_coding|CODING|LOC_Os02g01500.1|19|1) FN-141.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN-141 Single Base Substitution A-T INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-163.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN-163 Single Base Substitution A-T INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-272.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN-272 Single Base Substitution A-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1746-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN1746-S SNP A -> T AC=2;AN=188;BQB=0.878856;DP=3434;DP4=1697,1686,14,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.05879e-16;MQSB=0.902217;RPB=0.857325;SGB=59.139;VDB=0.0607318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN2205-S SNP A -> T AC=1;AN=190;BQB=0.889563;DP=4927;DP4=2412,2240,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88359e-14;MQSB=0.774961;RPB=0.645016;SGB=78.7471;VDB=0.550023;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN3830-S SNP A -> T AC=2;AN=190;BQB=0.877427;DP=2515;DP4=1147,1258,12,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.20774e-17;MQSB=0.999142;RPB=0.851902;SGB=89.4087;VDB=0.701428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN3999-S SNP A -> T AC=2;AN=168;BQB=0.852591;DP=2433;DP4=1076,1236,10,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.89118e-11;MQSB=0.953878;RPB=0.955708;SGB=11.3448;VDB=0.721916;EFF=INTERGENIC(MODIFIER||||||||||1) FN4121-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN4121-S SNP A -> T AC=2;AN=182;BQB=0.979323;DP=2827;DP4=1326,1422,4,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.66668e-07;MQSB=0.990587;RPB=0.933984;SGB=28.6061;VDB=0.3409;EFF=INTERGENIC(MODIFIER||||||||||1) FN531-S.SNP.2:294985 chr02:000294985 0 W/294985-294985 FN531-S Single Base Substitution A-T INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN2611-S.SNP.2:305018 chr02:000305018 0 W/305018-305018 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.522196;DP=4820;DP4=2417,2027,14,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48735e-19;MQSB=0.999972;RPB=0.555372;SGB=115.978;VDB=0.555516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.2:307384 chr02:000307384 0 W/307384-307384 FN2269-S SNP C -> T AC=1;AN=190;BQB=0.233375;DP=4147;DP4=2281,1660,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000241138;MQB=1.6798e-11;MQSB=0.0958426;RPB=0.757782;SGB=99.1879;VDB=0.600356;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F109|332|LOC_Os02g01540|protein_coding|CODING|LOC_Os02g01540.1|1|1) FN2308.SNP.2:315333 chr02:000315333 0 W/315333-315333 FN2308 SNP G -> C AC=1;AN=192;BQB=0.974607;DP=5159;DP4=2200,2676,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.74817e-15;MQSB=0.992408;RPB=0.016166;SGB=-40.9913;VDB=0.614729;EFF=INTRON(MODIFIER||||527|LOC_Os02g01550|protein_coding|CODING|LOC_Os02g01550.2|1|1),INTRON(MODIFIER||||529|LOC_Os02g01550|protein_coding|CODING|LOC_Os02g01550.1|1|1) FN1062-S.SNP.2:335363 chr02:000335363 0 W/335363-335363 FN1062-S Single Base Substitution A-G INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3535-S.SNP.2:335366 chr02:000335366 0 W/335366-335366 FN3535-S SNP T -> C AC=1;AN=188;BQB=0.941198;DP=2840;DP4=1279,1453,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.55366e-07;MQSB=0.975657;RPB=0.921199;SGB=39.8925;VDB=0.759714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.2:335824 chr02:000335824 0 W/335824-335824 FN1668-S SNP T -> A AC=1;AN=188;BQB=0.182443;DP=3430;DP4=1853,1510,11,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.10663e-10;MQSB=0.744277;RPB=0.982755;SGB=-281.443;VDB=0.23436;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.2:348482 chr02:000348482 0 W/348482-348482 FN673-S Single Base Substitution G-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN673-S.SNP.2:348483 chr02:000348483 0 W/348483-348483 FN673-S Single Base Substitution A-T INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN322-S.SNP.2:354480 chr02:000354480 0 W/354480-354480 FN322-S Single Base Substitution A-T INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN555-S.SNP.2:385492 chr02:000385492 0 W/385492-385492 FN555-S Single Base Substitution T-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1293-S.SNP.2:390124 chr02:000390124 0 W/390124-390124 FN1293-S Single Base Substitution A-C INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN-408.SNP.2:390926 chr02:000390926 0 W/390926-390926 FN-408 Single Base Substitution A-G INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN1230-S.SNP.2:393188 chr02:000393188 0 W/393188-393188 FN1230-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1358-S.SNP.2:393225 chr02:000393225 0 W/393225-393225 FN1358-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g01710 peptidase family C78 domain containing protein, expressed SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN4084-S.SNP.2:400788 chr02:000400788 0 W/400788-400788 FN4084-S SNP G -> A AC=2;AN=182;BQB=0.947607;DP=3073;DP4=1438,1546,17,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.46623e-17;MQSB=0.995892;RPB=0.87773;SGB=91.8015;VDB=0.197533;EFF=INTRON(MODIFIER||||354|LOC_Os02g01720|protein_coding|CODING|LOC_Os02g01720.1|8|1) FN1720-S.SNP.2:407044 chr02:000407044 0 W/407044-407044 FN1720-S SNP G -> A AC=1;AN=188;BQB=0.0582031;DP=3728;DP4=1836,1848,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4525e-07;MQSB=0.92209;RPB=0.741769;SGB=-128.262;VDB=0.0266506;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.2:408858 chr02:000408858 0 W/408858-408858 FN_814-7-1 Single Base Substitution C-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3787-S.SNP.2:409614 chr02:000409614 0 W/409614-409614 FN3787-S SNP T -> C AC=2;AN=190;BQB=0.823485;DP=2357;DP4=1245,989,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.6998e-13;MQSB=0.964392;RPB=0.992971;SGB=85.8548;VDB=0.41381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.2:414216 chr02:000414216 0 W/414216-414216 FN2166-S SNP G -> T AC=1;AN=168;BQB=0.367387;DP=4048;DP4=1881,2129,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.43004e-09;MQSB=0.978048;RPB=0.971443;SGB=27.0464;VDB=0.469215;EFF=INTRON(MODIFIER||||2177|LOC_Os02g01740|protein_coding|CODING|LOC_Os02g01740.1|2|1) FN2166-S.SNP.2:414217 chr02:000414217 0 W/414217-414217 FN2166-S SNP A -> T AC=1;AN=168;BQB=0.228073;DP=4048;DP4=1875,2125,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52218e-09;MQSB=0.988406;RPB=0.868946;SGB=-14.9417;VDB=0.362211;EFF=INTRON(MODIFIER||||2177|LOC_Os02g01740|protein_coding|CODING|LOC_Os02g01740.1|2|1) FN-89.SNP.2:416977 chr02:000416977 0 W/416977-416977 FN-89 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g01740 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-200.SNP.2:420184 chr02:000420184 0 W/420184-420184 FN-200 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g01750 expressed protein SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN4037-S.SNP.2:429140 chr02:000429140 0 W/429140-429140 FN4037-S SNP T -> A AC=1;AN=168;BQB=0.998426;DP=2806;DP4=1429,1141,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.33258e-10;MQSB=0.994244;RPB=0.127071;SGB=15.6372;VDB=0.148642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.2:429782 chr02:000429782 0 W/429782-429782 FN2742-S SNP T -> C AC=1;AN=200;BQB=0.60487;DP=4875;DP4=2108,2606,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51116e-06;MQSB=0.839411;RPB=0.212933;SGB=81.8956;VDB=0.242124;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.2:432726 chr02:000432726 0 W/432726-432726 FN504-S Single Base Substitution G-A INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2438.SNP.2:437586 chr02:000437586 0 W/437586-437586 FN2438 SNP T -> C AC=1;AN=200;BQB=0.480483;DP=4659;DP4=2132,2260,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.37122e-09;MQSB=0.858716;RPB=0.551919;SGB=40.2696;VDB=0.0711402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.2:445908 chr02:000445908 0 W/445908-445908 FN1636-S Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os02g01800 receptor-like protein kinase precursor, putative, expressed SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN3722-S.SNP.2:447828 chr02:000447828 0 W/447828-447828 FN3722-S SNP G -> T AC=2;AN=190;BQB=0.971219;DP=2251;DP4=720,1449,3,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.96905e-15;MQSB=0.325142;RPB=0.893963;SGB=126.511;VDB=0.559144;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.2:449257 chr02:000449257 0 W/449257-449257 FN-136 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g01810 expressed protein SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1053-S.SNP.2:471838 chr02:000471838 0 W/471838-471838 FN1053-S Single Base Substitution C-T INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN-238.SNP.2:475052 chr02:000475052 0 W/475052-475052 FN-238 Single Base Substitution C-A INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-87.SNP.2:475052 chr02:000475052 0 W/475052-475052 FN-87 Single Base Substitution C-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN666-S.SNP.2:475052 chr02:000475052 0 W/475052-475052 FN666-S Single Base Substitution C-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN1109-S.SNP.2:475291 chr02:000475291 0 W/475291-475291 FN1109-S Single Base Substitution C-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2398.SNP.2:475945 chr02:000475945 0 W/475945-475945 FN2398 SNP A -> T AC=1;AN=200;BQB=0.917764;DP=5694;DP4=2941,2379,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59132e-08;MQSB=0.882418;RPB=0.506346;SGB=36.6644;VDB=0.707762;EFF=INTERGENIC(MODIFIER||||||||||1) FN-51.SNP.2:480339 chr02:000480339 0 W/480339-480339 FN-51 Single Base Substitution A-T INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:480339 chr02:000480339 0 W/480339-480339 FN-51 Single Base Substitution A-T INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3743-S.SNP.2:484802 chr02:000484802 0 W/484802-484802 FN3743-S SNP A -> G AC=2;AN=190;BQB=0.827795;DP=2522;DP4=930,1455,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90413e-13;MQSB=0.816647;RPB=0.910254;SGB=28.9731;VDB=0.324389;EFF=INTRON(MODIFIER||||223|LOC_Os02g01880|protein_coding|CODING|LOC_Os02g01880.1|1|1) FN924-S.SNP.2:487194 chr02:000487194 0 W/487194-487194 FN924-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3979-S.SNP.2:487679 chr02:000487679 0 W/487679-487679 FN3979-S SNP A -> C AC=1;AN=168;BQB=0.957281;DP=2217;DP4=995,1090,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.22715e-10;MQSB=0.999925;RPB=0.573272;SGB=74.3269;VDB=0.390055;EFF=SPLICE_SITE_REGION(LOW||||223|LOC_Os02g01880|protein_coding|CODING|LOC_Os02g01880.1|3|1),INTRON(MODIFIER||||223|LOC_Os02g01880|protein_coding|CODING|LOC_Os02g01880.1|3|1) FN2621-S.SNP.2:492994 chr02:000492994 0 W/492994-492994 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.570577;DP=4604;DP4=2254,2130,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.53717e-16;MQSB=0.64794;RPB=0.923115;SGB=-75.0485;VDB=0.63887;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.2:494078 chr02:000494078 0 W/494078-494078 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. W416-6-1.SNP.2:499053 chr02:000499053 0 W/499053-499053 W416-6-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN-346.SNP.2:504520 chr02:000504520 0 W/504520-504520 FN-346 Single Base Substitution T-C INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN1536-S.SNP.2:507548 chr02:000507548 0 W/507548-507548 FN1536-S Single Base Substitution G-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3369-S.SNP.2:509026 chr02:000509026 0 W/509026-509026 FN3369-S SNP C -> A AC=1;AN=184;BQB=0.903912;DP=2823;DP4=1427,1318,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90661e-13;MQSB=0.97766;RPB=0.968468;SGB=35.884;VDB=0.200442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.2:509027 chr02:000509027 0 W/509027-509027 FN3369-S SNP A -> T AC=1;AN=184;BQB=0.999985;DP=2842;DP4=1432,1340,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10382e-10;MQSB=0.957799;RPB=0.923834;SGB=66.8296;VDB=0.0577274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.2:521806 chr02:000521806 0 W/521806-521806 FN2557-S SNP C -> A AC=2;AN=198;BQB=0.793562;DP=3499;DP4=1663,1654,5,10;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000857388;MQB=5.73839e-06;MQSB=0.97257;RPB=0.910267;SGB=43.7442;VDB=0.183307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S239Y|517|LOC_Os02g01950|protein_coding|CODING|LOC_Os02g01950.1|11|1) FN1916.SNP.2:525884 chr02:000525884 0 W/525884-525884 FN1916 Single Base Substitution G-T HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN4123-S.SNP.2:527376 chr02:000527376 0 W/527376-527376 FN4123-S SNP G -> T AC=2;AN=182;BQB=0.977218;DP=2246;DP4=1010,1110,16,16;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000445236;MQB=6.1971e-14;MQSB=0.934473;RPB=0.998875;SGB=138.839;VDB=0.149658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.2:528723 chr02:000528723 0 W/528723-528723 FN2664-S SNP C -> G AC=1;AN=200;BQB=0.992725;DP=4211;DP4=2100,1882,12,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00284968;MQB=1.02557e-07;MQSB=0.00350403;RPB=0.129833;SGB=34.6953;VDB=0.828957;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.2:533743 chr02:000533743 0 W/533743-533743 FN1548-S SNP C -> T AC=2;AN=188;BQB=0.0037118;DP=2488;DP4=1066,1292,15,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.94471e-07;MQSB=0.033997;RPB=0.184978;SGB=-98.724;VDB=0.681991;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.2:534509 chr02:000534509 0 W/534509-534509 FN537-S Single Base Substitution G-A INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN3514-S.SNP.2:535446 chr02:000535446 0 W/535446-535446 FN3514-S SNP T -> C AC=1;AN=188;BQB=0.969591;DP=2559;DP4=1177,1319,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.5646e-05;MQSB=0.999907;RPB=0.971155;SGB=39.8925;VDB=0.416035;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T543|599|LOC_Os02g01960|protein_coding|CODING|LOC_Os02g01960.1|3|1) FN3824-S.SNP.2:536378 chr02:000536378 0 W/536378-536378 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.947019;DP=2510;DP4=1334,1118,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.22989e-10;MQSB=0.999386;RPB=0.79402;SGB=62.7569;VDB=0.422363;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S502F|599|LOC_Os02g01960|protein_coding|CODING|LOC_Os02g01960.1|2|1) FN445-S.SNP.2:537357 chr02:000537357 0 W/537357-537357 FN445-S Single Base Substitution G-A INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1073-S.SNP.2:539825 chr02:000539825 0 W/539825-539825 FN1073-S Single Base Substitution T-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN975-S.SNP.2:546814 chr02:000546814 0 W/546814-546814 FN975-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g01980 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1508-S.SNP.2:548802 chr02:000548802 0 W/548802-548802 FN1508-S Single Base Substitution C-A INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2342.SNP.2:556340 chr02:000556340 0 W/556340-556340 FN2342 SNP G -> A AC=1;AN=192;BQB=0.85652;DP=5202;DP4=2524,2327,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.78684e-10;MQSB=0.981704;RPB=0.335189;SGB=75.4235;VDB=0.993371;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.2:575174 chr02:000575174 0 W/575174-575174 FN3341-S SNP G -> T AC=1;AN=184;BQB=0.767821;DP=2798;DP4=1347,1359,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.4334e-08;MQSB=0.997332;RPB=0.700089;SGB=39.2697;VDB=0.979054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D2284E|2630|LOC_Os02g02050|protein_coding|CODING|LOC_Os02g02050.1|21|1) FN3756-S.SNP.2:585343 chr02:000585343 0 W/585343-585343 FN3756-S SNP T -> A AC=1;AN=190;BQB=0.592495;DP=2507;DP4=1177,1217,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.76258e-06;MQSB=0.953315;RPB=0.21539;SGB=28.9929;VDB=0.317696;EFF=INTRON(MODIFIER||||2630|LOC_Os02g02050|protein_coding|CODING|LOC_Os02g02050.1|9|1) FN-345.SNP.2:593864 chr02:000593864 0 W/593864-593864 FN-345 Single Base Substitution A-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN755-S.SNP.2:594960 chr02:000594960 0 W/594960-594960 FN755-S Single Base Substitution A-G INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3768-S.SNP.2:600551 chr02:000600551 0 W/600551-600551 FN3768-S SNP C -> T AC=1;AN=190;BQB=0.925363;DP=2977;DP4=1580,1312,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.0886799;MQB=0.903682;MQSB=0;RPB=0.667077;SGB=71.8647;VDB=0.69589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1374H|1511|LOC_Os02g02060|protein_coding|CODING|LOC_Os02g02060.1|1|1) FN2630-S.SNP.2:609354 chr02:000609354 0 W/609354-609354 FN2630-S SNP T -> A AC=1;AN=200;BQB=0.993561;DP=4749;DP4=2276,2293,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73643e-12;MQSB=0.91522;RPB=0.802441;SGB=61.9006;VDB=0.0365593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.2:609611 chr02:000609611 0 W/609611-609611 FN3795-S SNP A -> G AC=1;AN=190;BQB=0.998747;DP=2771;DP4=1051,1521,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.20557e-07;MQSB=0.00362262;RPB=0.796883;SGB=58.2031;VDB=0.643015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.2:611042 chr02:000611042 0 W/611042-611042 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.431368;DP=4924;DP4=2033,2575,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.95134e-09;MQSB=0.515424;RPB=0.725604;SGB=-13.1102;VDB=0.98793;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T57|141|LOC_Os02g02080|protein_coding|CODING|LOC_Os02g02080.1|1|1) FN2314.SNP.2:620128 chr02:000620128 0 W/620128-620128 FN2314 SNP A -> T AC=2;AN=192;BQB=0.0859606;DP=4789;DP4=2237,2282,17,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.99554e-14;MQSB=0.45207;RPB=0.358351;SGB=135.933;VDB=0.921351;EFF=INTRON(MODIFIER||||933|LOC_Os02g02100|protein_coding|CODING|LOC_Os02g02100.1|1|1) FN-341.SNP.2:633025 chr02:000633025 0 W/633025-633025 FN-341 Single Base Substitution G-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1115-S.SNP.2:641086 chr02:000641086 0 W/641086-641086 FN1115-S Single Base Substitution A-G INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3752-S.SNP.2:644387 chr02:000644387 0 W/644387-644387 FN3752-S SNP T -> G AC=2;AN=190;BQB=0.950461;DP=2337;DP4=1084,1156,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92036e-12;MQSB=0.976569;RPB=0.594141;SGB=80.9724;VDB=0.667442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1190-S.SNP.2:659588 chr02:000659588 0 W/659588-659588 FN1190-S Single Base Substitution C-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2593-S.SNP.2:666899 chr02:000666899 0 W/666899-666899 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.957196;DP=4186;DP4=2065,1926,16,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.50859e-18;MQSB=0.950164;RPB=0.688441;SGB=101.266;VDB=0.0311189;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.2:673522 chr02:000673522 0 W/673522-673522 FN4185-S SNP C -> T AC=1;AN=170;BQB=0.640282;DP=2680;DP4=1232,1352,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.061194;MQB=0.800729;MQSB=9.78187e-10;RPB=0.995921;SGB=41.7633;VDB=0.398222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.2:680894 chr02:000680894 0 W/680894-680894 FN3630-S SNP T -> A AC=1;AN=190;BQB=0.956429;DP=2087;DP4=1055,910,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21285e-05;MQSB=0.957859;RPB=0.309599;SGB=18.3316;VDB=0.0590089;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|16|1) FN962-S.SNP.2:689138 chr02:000689138 0 W/689138-689138 FN962-S Single Base Substitution A-G INTRON HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3322-S.SNP.2:691779 chr02:000691779 0 W/691779-691779 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.953723;DP=3865;DP4=1857,1919,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000517464;MQB=3.27252e-05;MQSB=0.450404;RPB=0.580048;SGB=35.1773;VDB=0.881509;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|3|1) FN2581-S.SNP.2:692052 chr02:000692052 0 W/692052-692052 FN2581-S SNP G -> A AC=1;AN=198;BQB=0.871007;DP=3740;DP4=1671,1894,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00561497;MQB=0.00120202;MQSB=0.289487;RPB=0.699527;SGB=40.3588;VDB=0.0912876;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|3|1) FN3819-S.SNP.2:695446 chr02:000695446 0 W/695446-695446 FN3819-S SNP G -> C AC=1;AN=190;BQB=0.867489;DP=3270;DP4=1668,1507,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59627e-09;MQSB=0.994955;RPB=0.992489;SGB=62.7569;VDB=0.393621;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|2|1) FN3925-S.SNP.2:696366 chr02:000696366 0 W/696366-696366 FN3925-S SNP A -> G AC=2;AN=158;BQB=0.905827;DP=2461;DP4=1314,1061,21,22;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.82761e-22;MQSB=0.976502;RPB=0.999977;SGB=182.52;VDB=0.54655;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|2|1) FN3935-S.SNP.2:697148 chr02:000697148 0 W/697148-697148 FN3935-S SNP A -> G AC=1;AN=158;BQB=0.999968;DP=2451;DP4=1306,1047,16,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.28366e-15;MQSB=0.9937;RPB=0.0845708;SGB=121.348;VDB=0.340401;EFF=INTRON(MODIFIER||||483|LOC_Os02g02210|protein_coding|CODING|LOC_Os02g02210.1|1|1) FN2313.SNP.2:697555 chr02:000697555 0 W/697555-697555 FN2313 SNP C -> T AC=1;AN=192;BQB=0.558942;DP=5111;DP4=2498,2284,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.27365e-12;MQSB=0.858073;RPB=0.368918;SGB=-12.5113;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.2:698495 chr02:000698495 0 W/698495-698495 FN2315 SNP G -> A AC=2;AN=192;BQB=0.241899;DP=5014;DP4=2382,2338,28,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.67321e-26;MQSB=0.916538;RPB=0.836424;SGB=68.3644;VDB=0.946694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.2:699997 chr02:000699997 0 W/699997-699997 FN1108-S Single Base Substitution C-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2792-S.SNP.2:700928 chr02:000700928 0 W/700928-700928 FN2792-S SNP C -> A AC=2;AN=198;BQB=0.552504;DP=4172;DP4=2331,1654,23,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.93042e-22;MQSB=0.715185;RPB=0.710637;SGB=178.212;VDB=0.108133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.2:704758 chr02:000704758 0 W/704758-704758 FN1047-S Single Base Substitution T-C INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1753-S.SNP.2:715476 chr02:000715476 0 W/715476-715476 FN1753-S SNP T -> C AC=2;AN=188;BQB=0.654603;DP=3334;DP4=954,2335,8,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.0483e-12;MQSB=0.999059;RPB=0.93722;SGB=20.9711;VDB=0.954064;EFF=INTRON(MODIFIER||||526|LOC_Os02g02230|protein_coding|CODING|LOC_Os02g02230.1|2|1) FN596-S.SNP.2:717089 chr02:000717089 0 W/717089-717089 FN596-S Single Base Substitution G-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN596-S.SNP.2:717100 chr02:000717100 0 W/717100-717100 FN596-S Single Base Substitution T-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN596-S.SNP.2:717111 chr02:000717111 0 W/717111-717111 FN596-S Single Base Substitution G-C INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1501-S.SNP.2:721624 chr02:000721624 0 W/721624-721624 FN1501-S Single Base Substitution A-C INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W607-2-1.SNP.2:742590 chr02:000742590 0 W/742590-742590 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. W554-1-1.SNP.2:751472 chr02:000751472 0 W/751472-751472 W554-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g02290 SNF2 family N-terminal domain containing protein, expressed SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. W7-1-1.SNP.2:760217 chr02:000760217 0 W/760217-760217 W7-1-1 Single Base Substitution T-G INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN464-S.SNP.2:761089 chr02:000761089 0 W/761089-761089 FN464-S Single Base Substitution T-C INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN2423.SNP.2:769846 chr02:000769846 0 W/769846-769846 FN2423 SNP G -> A AC=1;AN=200;BQB=0.940145;DP=5000;DP4=2526,2201,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0004;MQB=9.02956e-15;MQSB=0.982345;RPB=0.7745;SGB=60.747;VDB=0.225543;EFF=INTRON(MODIFIER||||500|LOC_Os02g02320|protein_coding|CODING|LOC_Os02g02320.1|4|1) FN1406-S.SNP.2:773648 chr02:000773648 0 W/773648-773648 FN1406-S Single Base Substitution C-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1406-S.SNP.2:775365 chr02:000775365 0 W/775365-775365 FN1406-S Single Base Substitution T-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN-112.SNP.2:781544 chr02:000781544 0 W/781544-781544 FN-112 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g02350 OsFBK2 - F-box domain and kelch repeat containing protein, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN-98.SNP.2:807702 chr02:000807702 0 W/807702-807702 FN-98 Single Base Substitution G-A INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN4312-S.SNP.2:808228 chr02:000808228 0 W/808228-808228 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.678639;DP=2796;DP4=1068,1648,11,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16759e-09;MQSB=0.76815;RPB=0.887001;SGB=41.8678;VDB=0.191847;EFF=INTERGENIC(MODIFIER||||||||||1) FN981-S.SNP.2:824899 chr02:000824899 0 W/824899-824899 FN981-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1429-S.SNP.2:834031 chr02:000834031 0 W/834031-834031 FN1429-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-156.SNP.2:837286 chr02:000837286 0 W/837286-837286 FN-156 Single Base Substitution T-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2665-S.SNP.2:839856 chr02:000839856 0 W/839856-839856 FN2665-S SNP T -> A AC=1;AN=200;BQB=0.891995;DP=4606;DP4=2322,2054,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8579e-10;MQSB=0.973576;RPB=0.642415;SGB=12.7003;VDB=0.456643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q461L|665|LOC_Os02g02410|protein_coding|CODING|LOC_Os02g02410.1|6|1) FN2146-S.SNP.2:844785 chr02:000844785 0 W/844785-844785 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.488685;DP=3813;DP4=2244,1539,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.08973e-07;MQSB=0.993475;RPB=0.940505;SGB=1.32907;VDB=0.0577701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.2:846481 chr02:000846481 0 W/846481-846481 FN2192-S SNP T -> A AC=1;AN=190;BQB=0.870832;DP=4736;DP4=2454,1946,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0605e-10;MQSB=0.994863;RPB=0.825183;SGB=57.4238;VDB=0.12623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.2:847973 chr02:000847973 0 W/847973-847973 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.999988;DP=4766;DP4=2332,2197,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.92591e-12;MQSB=0.82987;RPB=0.950819;SGB=42.5108;VDB=0.878205;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.2:859824 chr02:000859824 0 W/859824-859824 FN4230-S SNP C -> A AC=1;AN=170;BQB=0.998793;DP=2733;DP4=1352,1276,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.08333e-07;MQSB=0.934618;RPB=0.831679;SGB=31.4354;VDB=0.437632;EFF=UTR_5_PRIME(MODIFIER||2422||379|LOC_Os02g02424|protein_coding|CODING|LOC_Os02g02424.1|1|1),UTR_5_PRIME(MODIFIER||4578||261|LOC_Os02g02424|protein_coding|CODING|LOC_Os02g02424.2|1|1) FN1175-S.SNP.2:867636 chr02:000867636 0 W/867636-867636 FN1175-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g02460 transposon protein, putative, unclassified, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-247.SNP.2:869422 chr02:000869422 0 W/869422-869422 FN-247 Single Base Substitution G-T INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2625-S.SNP.2:874077 chr02:000874077 0 W/874077-874077 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.991312;DP=4872;DP4=2069,2542,7,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.90837e-15;MQSB=0.235099;RPB=0.988601;SGB=-7.6637;VDB=0.98783;EFF=INTRON(MODIFIER||||400|LOC_Os02g02470|protein_coding|CODING|LOC_Os02g02470.1|6|1) FN494-S.SNP.2:877767 chr02:000877767 0 W/877767-877767 FN494-S Single Base Substitution C-T INTRON HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN4164-S.SNP.2:893426 chr02:000893426 0 W/893426-893426 FN4164-S SNP A -> G AC=1;AN=170;BQB=0.661994;DP=2391;DP4=1239,1088,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19227e-05;MQSB=0.935031;RPB=0.993321;SGB=10.1134;VDB=0.662672;EFF=INTRON(MODIFIER||||510|LOC_Os02g02500|protein_coding|CODING|LOC_Os02g02500.1|5|1) FN1528-S.SNP.2:896727 chr02:000896727 0 W/896727-896727 FN1528-S Single Base Substitution A-T INTRON Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1619-S.SNP.2:899098 chr02:000899098 0 W/899098-899098 FN1619-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-139.SNP.2:919861 chr02:000919861 0 W/919861-919861 FN-139 Single Base Substitution C-T INTRON HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN4344-S.SNP.2:926859 chr02:000926859 0 W/926859-926859 FN4344-S SNP C -> T AC=2;AN=170;BQB=0.757873;DP=2574;DP4=1304,1170,18,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.39891e-15;MQSB=0.970089;RPB=0.591305;SGB=127.84;VDB=0.943071;EFF=INTRON(MODIFIER||||467|LOC_Os02g02560|protein_coding|CODING|LOC_Os02g02560.1|18|1) FN1737-S.SNP.2:928490 chr02:000928490 0 W/928490-928490 FN1737-S SNP A -> G AC=2;AN=188;BQB=0.431933;DP=4038;DP4=2093,1891,24,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.67113e-18;MQSB=0.986411;RPB=0.293987;SGB=-4.67716;VDB=0.694232;EFF=INTRON(MODIFIER||||467|LOC_Os02g02560|protein_coding|CODING|LOC_Os02g02560.1|8|1) FN480-S.SNP.2:929462 chr02:000929462 0 W/929462-929462 FN480-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g02560 UTP--glucose-1-phosphate uridylyltransferase, putative, expressed SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN-368.SNP.2:929642 chr02:000929642 0 W/929642-929642 FN-368 Single Base Substitution T-C INTRON HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3861-S.SNP.2:938271 chr02:000938271 0 W/938271-938271 FN3861-S SNP C -> A AC=1;AN=158;BQB=0.97156;DP=1884;DP4=1055,757,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.40506e-06;MQSB=0.935425;RPB=0.999731;SGB=20.5959;VDB=0.823388;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.2:944711 chr02:000944711 0 W/944711-944711 FN4016-S SNP A -> T AC=1;AN=168;BQB=0.992273;DP=2630;DP4=1340,1161,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13244e-13;MQSB=0.836982;RPB=0.194897;SGB=109.773;VDB=0.0489335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.2:945482 chr02:000945482 0 W/945482-945482 FN3520-S SNP T -> C AC=1;AN=188;BQB=0.870645;DP=2598;DP4=1193,1270,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.11472e-11;MQSB=0.956444;RPB=0.136197;SGB=43.8792;VDB=0.0859012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.2:951100 chr02:000951100 0 W/951100-951100 FN1060-S Single Base Substitution T-A INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3396-S.SNP.2:955876 chr02:000955876 0 W/955876-955876 FN3396-S SNP A -> T AC=2;AN=184;BQB=0.932935;DP=2665;DP4=975,1557,11,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32271e-15;MQSB=0.0123751;RPB=0.212779;SGB=76.2326;VDB=0.00155734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.2:956008 chr02:000956008 0 W/956008-956008 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.98237;DP=2289;DP4=1196,1006,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00218436;MQB=0.20447;MQSB=5.26723e-13;RPB=0.889938;SGB=21.8113;VDB=0.147629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.2:965950 chr02:000965950 0 W/965950-965950 FN1163-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g02630 THION20 - Plant thionin family protein precursor, putative, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN-183.SNP.2:978353 chr02:000978353 0 W/978353-978353 FN-183 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g02660 retrotransposon protein, putative, unclassified, expressed SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN-183.SNP.2:978354 chr02:000978354 0 W/978354-978354 FN-183 Single Base Substitution G-T STOP_GAINED HOMO LOC_Os02g02660 retrotransposon protein, putative, unclassified, expressed SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN2715-S.SNP.2:981648 chr02:000981648 0 W/981648-981648 FN2715-S SNP A -> G AC=1;AN=200;BQB=0.986742;DP=4732;DP4=2036,2493,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.33903e-18;MQSB=0.999982;RPB=0.525471;SGB=101.557;VDB=0.719501;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q936R|2062|LOC_Os02g02660|protein_coding|CODING|LOC_Os02g02660.1|4|1) FN-399.SNP.2:986313 chr02:000986313 0 W/986313-986313 FN-399 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g02660 retrotransposon protein, putative, unclassified, expressed SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.2:986313 chr02:000986313 0 W/986313-986313 FN399-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g02660 retrotransposon protein, putative, unclassified, expressed SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3282-S.SNP.2:997662 chr02:000997662 0 W/997662-997662 FN3282-S SNP G -> A AC=2;AN=184;BQB=0.886609;DP=2758;DP4=1176,1455,15,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.35822e-19;MQSB=0.987784;RPB=0.120652;SGB=113.227;VDB=0.647651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3095-S.SNP.2:999601 chr02:000999601 0 W/999601-999601 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.968707;DP=3065;DP4=1444,1548,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5157e-05;MQSB=0.946871;RPB=0.951647;SGB=39.699;VDB=0.810159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.2:999902 chr02:000999902 0 W/999902-999902 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2381.SNP.2:999902 chr02:000999902 0 W/999902-999902 FN2381 SNP G -> A AC=1;AN=192;BQB=0.0640769;DP=4892;DP4=2333,2283,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.29637e-16;MQSB=0.834475;RPB=0.725791;SGB=-78.8574;VDB=0.13829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.2:999902 chr02:000999902 0 W/999902-999902 FN3496-S SNP G -> A AC=1;AN=188;BQB=0.983701;DP=3312;DP4=1600,1647,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86995e-07;MQSB=0.940943;RPB=0.838678;SGB=35.9843;VDB=0.700822;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.2:1003262 chr02:001003262 0 W/1003262-1003262 FN-178 Single Base Substitution C-T INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN925-S.SNP.2:1003949 chr02:001003949 0 W/1003949-1003949 FN925-S Single Base Substitution C-A INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3537-S.SNP.2:1006555 chr02:001006555 0 W/1006555-1006555 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.997775;DP=2933;DP4=1566,1256,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17201e-08;MQSB=0.999759;RPB=0.79247;SGB=58.0655;VDB=0.851906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.2:1007746 chr02:001007746 0 W/1007746-1007746 FN-101 Single Base Substitution G-A INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-101.SNP.2:1007747 chr02:001007747 0 W/1007747-1007747 FN-101 Single Base Substitution T-A INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3911-S.SNP.2:1009680 chr02:001009680 0 W/1009680-1009680 FN3911-S SNP G -> C AC=1;AN=158;BQB=0.118983;DP=2180;DP4=1014,1086,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000688525;MQSB=0.960694;RPB=0.108202;SGB=7.23273;VDB=0.712841;EFF=INTRON(MODIFIER||||428|LOC_Os02g02690|protein_coding|CODING|LOC_Os02g02690.1|8|1) FN449-S.SNP.2:1012654 chr02:001012654 0 W/1012654-1012654 FN449-S Single Base Substitution C-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN-202.SNP.2:1018191 chr02:001018191 0 W/1018191-1018191 FN-202 Single Base Substitution A-G INTRON HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN-349.SNP.2:1024109 chr02:001024109 0 W/1024109-1024109 FN-349 Single Base Substitution T-C INTRON HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2081-S.SNP.2:1038263 chr02:001038263 0 W/1038263-1038263 FN2081-S SNP T -> A AC=1;AN=168;BQB=0.122064;DP=3967;DP4=1886,2008,17,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.23596e-15;MQSB=0.989626;RPB=0.968802;SGB=-223.45;VDB=0.758107;EFF=INTRON(MODIFIER||||367|LOC_Os02g02740|protein_coding|CODING|LOC_Os02g02740.2|1|1),INTRON(MODIFIER||||367|LOC_Os02g02740|protein_coding|CODING|LOC_Os02g02740.3|1|1) FN1416-S.SNP.2:1056214 chr02:001056214 0 W/1056214-1056214 FN1416-S Single Base Substitution C-T INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-240.SNP.2:1057468 chr02:001057468 0 W/1057468-1057468 FN-240 Single Base Substitution G-A INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1703-S.SNP.2:1057536 chr02:001057536 0 W/1057536-1057536 FN1703-S SNP A -> T AC=1;AN=188;BQB=0.062085;DP=3401;DP4=1622,1749,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.5983e-07;MQSB=0.939486;RPB=0.90075;SGB=39.5276;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.2:1061210 chr02:001061210 0 W/1061210-1061210 FN-285 Single Base Substitution G-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN4043-S.SNP.2:1073126 chr02:001073126 0 W/1073126-1073126 FN4043-S SNP A -> G AC=1;AN=168;BQB=0.896265;DP=2396;DP4=1096,1187,6,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.60111e-12;MQSB=0.966513;RPB=0.907987;SGB=69.0561;VDB=0.87145;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.2:1080195 chr02:001080195 0 W/1080195-1080195 FN1198-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1702-S.SNP.2:1083313 chr02:001083313 0 W/1083313-1083313 FN1702-S SNP T -> G AC=2;AN=188;BQB=0.0983519;DP=3259;DP4=1327,1847,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.2113e-08;MQSB=0.950118;RPB=0.661724;SGB=-41.0182;VDB=0.784223;EFF=INTRON(MODIFIER||||197|LOC_Os02g02840|protein_coding|CODING|LOC_Os02g02840.1|1|1) FN-175.SNP.2:1090872 chr02:001090872 0 W/1090872-1090872 FN-175 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g02860 glutamyl-tRNA synthetase, putative, expressed SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3530-S.SNP.2:1091700 chr02:001091700 0 W/1091700-1091700 FN3530-S SNP C -> A AC=1;AN=188;BQB=0.437117;DP=2583;DP4=1260,1246,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.32515e-06;MQSB=0.980443;RPB=0.991364;SGB=18.4463;VDB=0.553116;EFF=INTRON(MODIFIER||||567|LOC_Os02g02860|protein_coding|CODING|LOC_Os02g02860.1|9|1) FN4016-S.SNP.2:1093880 chr02:001093880 0 W/1093880-1093880 FN4016-S SNP T -> G AC=1;AN=168;BQB=0.936733;DP=2493;DP4=1194,1208,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54106e-09;MQSB=0.99176;RPB=0.629799;SGB=48.4712;VDB=0.710467;EFF=INTRON(MODIFIER||||567|LOC_Os02g02860|protein_coding|CODING|LOC_Os02g02860.1|3|1) FN3550-S.SNP.2:1096993 chr02:001096993 0 W/1096993-1096993 FN3550-S SNP T -> C AC=1;AN=188;BQB=0.453149;DP=2685;DP4=964,1579,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82642e-05;MQSB=0.77295;RPB=0.376127;SGB=62.6088;VDB=0.0837128;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.2:1098731 chr02:001098731 0 W/1098731-1098731 FN-111 Single Base Substitution G-T INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN_N1-151-1.SNP.2:1100438 chr02:001100438 0 W/1100438-1100438 FN_N1-151-1 Single Base Substitution G-C INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN2258-S.SNP.2:1109098 chr02:001109098 0 W/1109098-1109098 FN2258-S SNP A -> T AC=2;AN=190;BQB=0.749434;DP=5094;DP4=2654,2175,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27847e-13;MQSB=0.864879;RPB=0.817713;SGB=90.0802;VDB=0.262654;EFF=INTRON(MODIFIER||||466|LOC_Os02g02880|protein_coding|CODING|LOC_Os02g02880.1|7|1) FN2258-S.SNP.2:1109099 chr02:001109099 0 W/1109099-1109099 FN2258-S SNP A -> T AC=2;AN=190;BQB=0.885058;DP=5088;DP4=2656,2176,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.60085e-13;MQSB=0.803881;RPB=0.923308;SGB=44.0907;VDB=0.160663;EFF=INTRON(MODIFIER||||466|LOC_Os02g02880|protein_coding|CODING|LOC_Os02g02880.1|7|1) FN2715-S.SNP.2:1111626 chr02:001111626 0 W/1111626-1111626 FN2715-S SNP C -> G AC=1;AN=200;BQB=0.501974;DP=4987;DP4=2502,2231,2,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.89871e-09;MQSB=0.999154;RPB=0.571654;SGB=29.4849;VDB=0.920351;EFF=INTRON(MODIFIER||||466|LOC_Os02g02880|protein_coding|CODING|LOC_Os02g02880.1|1|1) FN3358-S.SNP.2:1112496 chr02:001112496 0 W/1112496-1112496 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.553904;DP=3043;DP4=1413,1459,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.00931e-07;MQSB=0.777092;RPB=0.989825;SGB=42.7914;VDB=0.679302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.2:1114962 chr02:001114962 0 W/1114962-1114962 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2561-S.SNP.2:1117023 chr02:001117023 0 W/1117023-1117023 FN2561-S SNP A -> T AC=1;AN=198;BQB=0.00965118;DP=4448;DP4=2042,2167,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00221451;MQSB=0.998339;RPB=0.521882;SGB=18.5788;VDB=0.730564;EFF=UTR_3_PRIME(MODIFIER||345||172|LOC_Os02g02890|protein_coding|CODING|LOC_Os02g02890.1|1|1) FN690-S.SNP.2:1128356 chr02:001128356 0 W/1128356-1128356 FN690-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN767-S.SNP.2:1139836 chr02:001139836 0 W/1139836-1139836 FN767-S Single Base Substitution T-C INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN672-S.SNP.2:1142729 chr02:001142729 0 W/1142729-1142729 FN672-S Single Base Substitution C-T INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN-95.SNP.2:1146742 chr02:001146742 0 W/1146742-1146742 FN-95 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g02930 terpene synthase, putative, expressed SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-95.SNP.2:1146743 chr02:001146743 0 W/1146743-1146743 FN-95 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g02930 terpene synthase, putative, expressed SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3866-S.SNP.2:1149892 chr02:001149892 0 W/1149892-1149892 FN3866-S SNP G -> T AC=2;AN=158;BQB=0.977744;DP=2688;DP4=1379,1220,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.51352e-16;MQSB=0.878542;RPB=0.94245;SGB=116.978;VDB=0.450867;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A430S|595|LOC_Os02g02930|protein_coding|CODING|LOC_Os02g02930.1|6|1) FN4344-S.SNP.2:1155332 chr02:001155332 0 W/1155332-1155332 FN4344-S SNP A -> G AC=1;AN=170;BQB=0.938911;DP=3187;DP4=1384,1603,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23566e-11;MQSB=0.996619;RPB=0.947771;SGB=83.4133;VDB=0.386157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N213S|624|LOC_Os02g02950|protein_coding|CODING|LOC_Os02g02950.1|1|1) FN-121.SNP.2:1158391 chr02:001158391 0 W/1158391-1158391 FN-121 Single Base Substitution G-A INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3558-S.SNP.2:1158391 chr02:001158391 0 W/1158391-1158391 FN3558-S SNP G -> A AC=1;AN=188;BQB=0.846624;DP=2960;DP4=1374,1526,4,13;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0135135;MQB=0.923325;MQSB=0.997228;RPB=0.176848;SGB=50.1574;VDB=0.219039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.2:1163392 chr02:001163392 0 W/1163392-1163392 FN3629-S SNP A -> G AC=1;AN=190;BQB=0.71851;DP=3136;DP4=1623,1391,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.79854e-08;MQSB=0.765844;RPB=0.818615;SGB=15.9981;VDB=0.345999;EFF=INTRON(MODIFIER||||597|LOC_Os02g02970|protein_coding|CODING|LOC_Os02g02970.1|2|1) FN2462.SNP.2:1178242 chr02:001178242 0 W/1178242-1178242 FN2462 SNP G -> T AC=1;AN=200;BQB=0.0407747;DP=4965;DP4=2470,2270,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94997e-07;MQSB=0.0960578;RPB=0.904067;SGB=21.6694;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.2:1183229 chr02:001183229 0 W/1183229-1183229 FN1103-S Single Base Substitution T-C INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1722-S.SNP.2:1186988 chr02:001186988 0 W/1186988-1186988 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.591845;DP=2596;DP4=1177,1389,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38599e-07;MQSB=0.998507;RPB=0.992631;SGB=43.0708;VDB=0.768298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.2:1187817 chr02:001187817 0 W/1187817-1187817 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.661069;DP=4043;DP4=1850,1844,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.25784e-14;MQSB=0.912526;RPB=0.874877;SGB=121.957;VDB=0.065783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A12V|147|LOC_Os02g03020|protein_coding|CODING|LOC_Os02g03020.1|1|1) FN3852-S.SNP.2:1188140 chr02:001188140 0 W/1188140-1188140 FN3852-S SNP A -> G AC=2;AN=158;BQB=0.996545;DP=2383;DP4=1323,950,15,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.54246e-14;MQSB=0.990504;RPB=0.909759;SGB=74.5068;VDB=0.43604;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.2:1192660 chr02:001192660 0 W/1192660-1192660 FN1537-S Single Base Substitution G-C INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN4304-S.SNP.2:1195105 chr02:001195105 0 W/1195105-1195105 FN4304-S SNP A -> T AC=1;AN=170;BQB=0.979329;DP=2201;DP4=1010,1116,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.36249e-05;MQSB=0.996686;RPB=0.712313;SGB=25.6601;VDB=0.508059;EFF=UTR_5_PRIME(MODIFIER||348||249|LOC_Os02g03040|protein_coding|CODING|LOC_Os02g03040.3|3|1),UTR_5_PRIME(MODIFIER||364||243|LOC_Os02g03040|protein_coding|CODING|LOC_Os02g03040.4|3|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||279|LOC_Os02g03040|protein_coding|CODING|LOC_Os02g03040.1|2|1),INTRON(MODIFIER||||273|LOC_Os02g03040|protein_coding|CODING|LOC_Os02g03040.2|2|1) FN2231-S.SNP.2:1198913 chr02:001198913 0 W/1198913-1198913 FN2231-S SNP C -> A AC=1;AN=190;BQB=0.991011;DP=4838;DP4=2256,2326,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.19053e-12;MQSB=0.4299;RPB=0.568175;SGB=80.9724;VDB=0.151044;EFF=UTR_3_PRIME(MODIFIER||10||211|LOC_Os02g03050|protein_coding|CODING|LOC_Os02g03050.1|9|1),INTRON(MODIFIER||||225|LOC_Os02g03050|protein_coding|CODING|LOC_Os02g03050.2|8|1) FN2622-S.SNP.2:1199043 chr02:001199043 0 W/1199043-1199043 FN2622-S SNP A -> T AC=2;AN=200;BQB=0.989405;DP=4531;DP4=2235,1869,24,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.61371e-20;MQSB=0.544518;RPB=0.482527;SGB=-45.1863;VDB=0.0935446;EFF=INTRON(MODIFIER||||225|LOC_Os02g03050|protein_coding|CODING|LOC_Os02g03050.2|8|1),INTRON(MODIFIER||||211|LOC_Os02g03050|protein_coding|CODING|LOC_Os02g03050.1|8|1) FN2673-S.SNP.2:1204777 chr02:001204777 0 W/1204777-1204777 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.939875;DP=4692;DP4=2097,2340,21,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000426257;MQB=1.95714e-17;MQSB=0.94188;RPB=0.839084;SGB=150.973;VDB=0.476633;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.2:1210721 chr02:001210721 0 W/1210721-1210721 FN1237-S Single Base Substitution T-A INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1237-S.SNP.2:1210724 chr02:001210724 0 W/1210724-1210724 FN1237-S Single Base Substitution T-A INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1237-S.SNP.2:1210726 chr02:001210726 0 W/1210726-1210726 FN1237-S Single Base Substitution T-A INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1478-S.SNP.2:1211243 chr02:001211243 0 W/1211243-1211243 FN1478-S Single Base Substitution T-C INTERGENIC Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN4001-S.SNP.2:1211844 chr02:001211844 0 W/1211844-1211844 FN4001-S SNP G -> T AC=1;AN=168;BQB=0.594739;DP=2844;DP4=1365,1378,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.86216e-06;MQSB=0.962195;RPB=0.814038;SGB=61.0344;VDB=0.842105;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.2:1220874 chr02:001220874 0 W/1220874-1220874 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2573-S.SNP.2:1221744 chr02:001221744 0 W/1221744-1221744 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.752112;DP=4369;DP4=2007,2095,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32096e-12;MQSB=0.920755;RPB=0.962142;SGB=58.1246;VDB=0.134744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.2:1221753 chr02:001221753 0 W/1221753-1221753 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.99144;DP=4431;DP4=2070,2099,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.70751e-11;MQSB=0.798268;RPB=0.70626;SGB=58.1246;VDB=0.191344;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.2:1235572 chr02:001235572 0 W/1235572-1235572 FN724-S Single Base Substitution A-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2210-S.SNP.2:1241307 chr02:001241307 0 W/1241307-1241307 FN2210-S SNP G -> T AC=1;AN=190;BQB=0.700788;DP=3295;DP4=1350,1492,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00030349;MQB=1.24451e-08;MQSB=0.00276616;RPB=0.39955;SGB=7.21887;VDB=0.549101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.2:1241309 chr02:001241309 0 W/1241309-1241309 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.639574;DP=3309;DP4=1507,1556,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000302206;MQB=1.17868e-08;MQSB=0.00230857;RPB=0.889259;SGB=50.3161;VDB=0.541944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.2:1241747 chr02:001241747 0 W/1241747-1241747 FN3911-S SNP T -> G AC=1;AN=158;BQB=0.998517;DP=2227;DP4=887,1187,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000898069;MQB=1.3345e-09;MQSB=0.00267737;RPB=0.698422;SGB=50.9207;VDB=0.971319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1131-S.SNP.2:1243705 chr02:001243705 0 W/1243705-1243705 FN1131-S Single Base Substitution C-T INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1257-S.SNP.2:1246053 chr02:001246053 0 W/1246053-1246053 FN1257-S Single Base Substitution A-G INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2342.SNP.2:1247431 chr02:001247431 0 W/1247431-1247431 FN2342 SNP G -> T AC=2;AN=192;BQB=0.999995;DP=4984;DP4=2365,2257,15,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.62214e-21;MQSB=0.918893;RPB=0.888272;SGB=77.6365;VDB=0.434312;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.2:1247432 chr02:001247432 0 W/1247432-1247432 FN2342 SNP G -> T AC=2;AN=192;BQB=0.329859;DP=4961;DP4=2265,2219,17,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.59967e-21;MQSB=0.966746;RPB=0.430728;SGB=-45.3478;VDB=0.294815;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.2:1247636 chr02:001247636 0 W/1247636-1247636 FN464-S Single Base Substitution T-C INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3980-S.SNP.2:1249881 chr02:001249881 0 W/1249881-1249881 FN3980-S SNP C -> A AC=1;AN=168;BQB=0.519731;DP=2949;DP4=1480,1356,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62252e-05;MQSB=0.988984;RPB=0.727067;SGB=31.3172;VDB=0.187282;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.2:1250398 chr02:001250398 0 W/1250398-1250398 FN4150-S SNP C -> T AC=2;AN=170;BQB=0.542421;DP=2833;DP4=1374,1254,21,30;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000352983;MQB=3.28647e-28;MQSB=0.745957;RPB=0.949154;SGB=185.788;VDB=0.965538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.2:1251859 chr02:001251859 0 W/1251859-1251859 FN1230-S Single Base Substitution G-T INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2553-S.SNP.2:1252088 chr02:001252088 0 W/1252088-1252088 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.983831;DP=4315;DP4=2064,2066,13,4;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0479722;MQB=0.000114768;MQSB=6.08418e-17;RPB=0.373121;SGB=50.9344;VDB=0.435056;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.2:1252284 chr02:001252284 0 W/1252284-1252284 W246-5-1 Single Base Substitution G-C INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2785-S.SNP.2:1261592 chr02:001261592 0 W/1261592-1261592 FN2785-S SNP A -> C AC=1;AN=198;BQB=0.901124;DP=3892;DP4=1877,1741,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65329e-13;MQSB=0.8108;RPB=0.921625;SGB=95.5;VDB=0.24087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.2:1271105 chr02:001271105 0 W/1271105-1271105 FN2334 SNP C -> A AC=1;AN=192;BQB=0.828246;DP=5103;DP4=2586,2195,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.7513e-12;MQSB=0.997782;RPB=0.661363;SGB=34.0426;VDB=0.677302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.2:1274533 chr02:001274533 0 W/1274533-1274533 FN3341-S SNP T -> A AC=1;AN=184;BQB=0.853655;DP=3570;DP4=1911,1555,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.2762e-05;MQSB=0.991493;RPB=0.979385;SGB=28.7043;VDB=0.922495;EFF=INTRON(MODIFIER||||599|LOC_Os02g03210|protein_coding|CODING|LOC_Os02g03210.1|1|1) FN3440-S.SNP.2:1274534 chr02:001274534 0 W/1274534-1274534 FN3440-S SNP A -> T AC=1;AN=184;BQB=0.649281;DP=3380;DP4=1670,1579,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48948e-10;MQSB=0.996548;RPB=0.893367;SGB=28.3187;VDB=0.18039;EFF=INTRON(MODIFIER||||599|LOC_Os02g03210|protein_coding|CODING|LOC_Os02g03210.1|1|1) FN2183-S.SNP.2:1288988 chr02:001288988 0 W/1288988-1288988 FN2183-S SNP A -> T AC=1;AN=190;BQB=0.999207;DP=4898;DP4=2260,2246,14,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.80563e-19;MQSB=0.901538;RPB=0.998457;SGB=79.845;VDB=0.686937;EFF=UTR_3_PRIME(MODIFIER||454||420|LOC_Os02g03230|protein_coding|CODING|LOC_Os02g03230.1|6|1) FN1460-S.SNP.2:1289185 chr02:001289185 0 W/1289185-1289185 FN1460-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN908-S.SNP.2:1297544 chr02:001297544 0 W/1297544-1297544 FN908-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g03240 transposon protein, putative, unclassified, expressed SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3105-S.SNP.2:1298553 chr02:001298553 0 W/1298553-1298553 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.961311;DP=3254;DP4=1731,1441,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.107867;MQB=0.371718;MQSB=4.39745e-35;RPB=0.987229;SGB=35.7479;VDB=0.536049;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|4|1),INTRON(MODIFIER||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|3|1);LOF=(LOC_Os02g03240|LOC_Os02g03240|1|1.00) FN3481-S.SNP.2:1298553 chr02:001298553 0 W/1298553-1298553 FN3481-S SNP G -> A AC=2;AN=184;BQB=0.983556;DP=2989;DP4=1603,1286,15,17;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0.102375;MQB=0.0415942;MQSB=6.92145e-30;RPB=0.245183;SGB=139.178;VDB=0.65905;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|4|1),INTRON(MODIFIER||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|3|1);LOF=(LOC_Os02g03240|LOC_Os02g03240|1|1.00) FN3992-S.SNP.2:1298553 chr02:001298553 0 W/1298553-1298553 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.992005;DP=2684;DP4=1480,1121,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0987332;MQB=0.458415;MQSB=9.75754e-19;RPB=0.990319;SGB=38.1788;VDB=0.167284;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|4|1),INTRON(MODIFIER||||898|LOC_Os02g03240|protein_coding|CODING|LOC_Os02g03240.1|3|1);LOF=(LOC_Os02g03240|LOC_Os02g03240|1|1.00) FN4181-S.SNP.2:1301694 chr02:001301694 0 W/1301694-1301694 FN4181-S SNP G -> T AC=1;AN=170;BQB=0.756513;DP=2747;DP4=1361,1289,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2429e-09;MQSB=0.977654;RPB=0.976792;SGB=61.2001;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.2:1320260 chr02:001320260 0 W/1320260-1320260 FN4344-S SNP A -> T AC=2;AN=170;BQB=0.752764;DP=2214;DP4=1235,930,5,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.43113e-08;MQSB=0.944272;RPB=0.434929;SGB=41.7633;VDB=0.43267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.2:1333481 chr02:001333481 0 W/1333481-1333481 FN2477 SNP T -> A AC=2;AN=200;BQB=0.99386;DP=4820;DP4=2391,1898,34,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.87404e-25;MQSB=0.897048;RPB=0.977121;SGB=-47.9501;VDB=0.214532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.2:1334260 chr02:001334260 0 W/1334260-1334260 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.786698;DP=4941;DP4=2389,2244,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.58093e-10;MQSB=0.995103;RPB=0.630288;SGB=68.0801;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.2:1337561 chr02:001337561 0 W/1337561-1337561 FN1579-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os02g03310 KH domain containing protein, putative, expressed SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN3385-S.SNP.2:1345843 chr02:001345843 0 W/1345843-1345843 FN3385-S SNP G -> T AC=2;AN=184;BQB=0.903469;DP=3094;DP4=1379,1603,10,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.80314e-16;MQSB=0.894482;RPB=0.235787;SGB=61.1019;VDB=0.191869;EFF=INTRON(MODIFIER||||250|LOC_Os02g03330|protein_coding|CODING|LOC_Os02g03330.1|1|1) FN568-S.SNP.2:1362872 chr02:001362872 0 W/1362872-1362872 FN568-S Single Base Substitution T-C INTRON HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN762-S.SNP.2:1364555 chr02:001364555 0 W/1364555-1364555 FN762-S Single Base Substitution C-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1070-S.SNP.2:1371452 chr02:001371452 0 W/1371452-1371452 FN1070-S Single Base Substitution C-T INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN623-S.SNP.2:1379152 chr02:001379152 0 W/1379152-1379152 FN623-S Single Base Substitution G-A INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN4090-S.SNP.2:1379412 chr02:001379412 0 W/1379412-1379412 FN4090-S SNP A -> G AC=1;AN=182;BQB=0.985268;DP=3102;DP4=1731,1255,14,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.87663e-11;MQSB=0.994017;RPB=0.995953;SGB=80.1982;VDB=0.921589;EFF=UTR_3_PRIME(MODIFIER||36||559|LOC_Os02g03400|protein_coding|CODING|LOC_Os02g03400.1|11|1) FN1422-S.SNP.2:1380552 chr02:001380552 0 W/1380552-1380552 FN1422-S Single Base Substitution C-A INTRON HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3997-S.SNP.2:1402551 chr02:001402551 0 W/1402551-1402551 FN3997-S SNP C -> A AC=1;AN=168;BQB=0.966409;DP=2181;DP4=844,1228,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93273e-07;MQSB=0.251667;RPB=0.989711;SGB=65.4653;VDB=0.898875;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.2:1406508 chr02:001406508 0 W/1406508-1406508 FN504-S Single Base Substitution A-C INTRON HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2662-S.SNP.2:1407164 chr02:001407164 0 W/1407164-1407164 FN2662-S SNP A -> T AC=1;AN=200;BQB=0.825166;DP=5063;DP4=2390,2522,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39375e-15;MQSB=0.888069;RPB=0.954966;SGB=109.527;VDB=0.207577;EFF=INTRON(MODIFIER||||362|LOC_Os02g03460|protein_coding|CODING|LOC_Os02g03460.1|3|1) FN2364.SNP.2:1412619 chr02:001412619 0 W/1412619-1412619 FN2364 SNP G -> T AC=1;AN=192;BQB=0.728776;DP=4292;DP4=1961,2018,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58221e-05;MQSB=0.980679;RPB=0.899448;SGB=29.087;VDB=0.218041;EFF=INTRON(MODIFIER||||310|LOC_Os02g03470|protein_coding|CODING|LOC_Os02g03470.1|1|1) FN1277-S.SNP.2:1416212 chr02:001416212 0 W/1416212-1416212 FN1277-S Single Base Substitution A-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3768-S.SNP.2:1420408 chr02:001420408 0 W/1420408-1420408 FN3768-S SNP A -> G AC=1;AN=190;BQB=0.648237;DP=2318;DP4=1052,1003,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36598e-10;MQSB=0.3941;RPB=0.182272;SGB=-38.5551;VDB=0.757494;EFF=UTR_3_PRIME(MODIFIER||6||99|LOC_Os02g03490|protein_coding|CODING|LOC_Os02g03490.1|1|1) FN-309.SNP.2:1420592 chr02:001420592 0 W/1420592-1420592 FN-309 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2083-S.SNP.2:1423823 chr02:001423823 0 W/1423823-1423823 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.997844;DP=2968;DP4=1369,1551,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.53966e-13;MQSB=0.825162;RPB=0.785013;SGB=44.0621;VDB=0.299414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.2:1427106 chr02:001427106 0 W/1427106-1427106 FN2375 SNP A -> T AC=2;AN=192;BQB=0.731034;DP=5004;DP4=2347,2348,19,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00019984;MQB=1.63095e-24;MQSB=0.999609;RPB=0.851389;SGB=143.146;VDB=0.466822;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.2:1429014 chr02:001429014 0 W/1429014-1429014 FN1753-S SNP A -> G AC=1;AN=188;BQB=0.0974168;DP=3176;DP4=1948,1188,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.59891e-10;MQSB=0.480323;RPB=0.297743;SGB=-11.1967;VDB=0.215436;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.2:1439782 chr02:001439782 0 W/1439782-1439782 FN_1017-1 Single Base Substitution C-A Homo LOC_Os02g03540 phosphoribosyl transferase, putative, expressed SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN780-S.SNP.2:1445012 chr02:001445012 0 W/1445012-1445012 FN780-S Single Base Substitution A-G INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3476-S.SNP.2:1459412 chr02:001459412 0 W/1459412-1459412 FN3476-S SNP T -> C AC=2;AN=184;BQB=0.950697;DP=2672;DP4=1298,1273,20,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.24726e-19;MQSB=1;RPB=0.330549;SGB=109.705;VDB=0.419989;EFF=INTRON(MODIFIER||||347|LOC_Os02g03580|protein_coding|CODING|LOC_Os02g03580.1|6|1),INTRON(MODIFIER||||175|LOC_Os02g03580|protein_coding|CODING|LOC_Os02g03580.2|6|1),INTRON(MODIFIER||||347|LOC_Os02g03580|protein_coding|CODING|LOC_Os02g03580.3|5|1) FN2334.SNP.2:1463639 chr02:001463639 0 W/1463639-1463639 FN2334 SNP G -> C AC=1;AN=192;BQB=0.0220921;DP=5000;DP4=2320,2433,6,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.63169e-08;MQSB=0.585285;RPB=0.888736;SGB=13.6122;VDB=0.628116;EFF=INTRON(MODIFIER||||446|LOC_Os02g03590|protein_coding|CODING|LOC_Os02g03590.1|9|1) FN3311-S.SNP.2:1492075 chr02:001492075 0 W/1492075-1492075 FN3311-S Single Base Substitution T-C INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN670-S.SNP.2:1493536 chr02:001493536 0 W/1493536-1493536 FN670-S Single Base Substitution G-A INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN-306.SNP.2:1495919 chr02:001495919 0 W/1495919-1495919 FN-306 Single Base Substitution A-C INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1712-S.SNP.2:1498633 chr02:001498633 0 W/1498633-1498633 FN1712-S SNP T -> C AC=1;AN=188;BQB=0.373007;DP=3786;DP4=1800,1939,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00554675;MQB=4.18645e-09;MQSB=4.22226e-12;RPB=0.99584;SGB=-39.6481;VDB=0.0406242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.2:1512699 chr02:001512699 0 W/1512699-1512699 FN1476-S Single Base Substitution C-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-408.SNP.2:1521477 chr02:001521477 0 W/1521477-1521477 FN-408 Single Base Substitution C-A INTRON HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN2161-S.SNP.2:1525918 chr02:001525918 0 W/1525918-1525918 FN2161-S SNP T -> C AC=1;AN=168;BQB=0.271877;DP=2243;DP4=1373,785,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000195737;MQSB=0.910925;RPB=0.394722;SGB=-77.5087;VDB=0.942534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V323A|407|LOC_Os02g03660|protein_coding|CODING|LOC_Os02g03660.1|1|1) FN-312.SNP.2:1537019 chr02:001537019 0 W/1537019-1537019 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1484-S.SNP.2:1537019 chr02:001537019 0 W/1537019-1537019 FN1484-S Single Base Substitution C-T INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1644-S.SNP.2:1537019 chr02:001537019 0 W/1537019-1537019 FN1644-S Single Base Substitution C-T INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN469-S.SNP.2:1537019 chr02:001537019 0 W/1537019-1537019 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. W385-6-8-4.SNP.2:1537019 chr02:001537019 0 W/1537019-1537019 W385-6-8-4 Single Base Substitution C-T INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN4022-S.SNP.2:1542738 chr02:001542738 0 W/1542738-1542738 FN4022-S SNP A -> T AC=2;AN=168;BQB=0.219461;DP=2909;DP4=1347,1442,16,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.9796e-08;MQSB=0.999598;RPB=0.28975;SGB=100.912;VDB=0.00498747;EFF=INTRON(MODIFIER||||801|LOC_Os02g03690|protein_coding|CODING|LOC_Os02g03690.1|4|1) FN-220.SNP.2:1547515 chr02:001547515 0 W/1547515-1547515 FN-220 Single Base Substitution A-T INTRON HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN3529-S.SNP.2:1547515 chr02:001547515 0 W/1547515-1547515 FN3529-S SNP A -> T AC=2;AN=188;BQB=0.757741;DP=3055;DP4=1533,1395,14,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.56785e-13;MQSB=0.9358;RPB=0.965527;SGB=17.8846;VDB=0.524245;EFF=INTRON(MODIFIER||||801|LOC_Os02g03690|protein_coding|CODING|LOC_Os02g03690.1|10|1) FN1273-S.SNP.2:1548800 chr02:001548800 0 W/1548800-1548800 FN1273-S Single Base Substitution T-A INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN2529-S.SNP.2:1553779 chr02:001553779 0 W/1553779-1553779 FN2529-S SNP T -> A AC=1;AN=198;BQB=0.957828;DP=4386;DP4=2174,1977,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.97486e-11;MQSB=0.99342;RPB=0.159211;SGB=50.9344;VDB=0.175167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.2:1553780 chr02:001553780 0 W/1553780-1553780 FN2529-S SNP T -> A AC=1;AN=198;BQB=0.972421;DP=4390;DP4=2187,1967,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.47684e-10;MQSB=0.915428;RPB=0.377975;SGB=63.3342;VDB=0.241276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.2:1557705 chr02:001557705 0 W/1557705-1557705 FN1250-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2334.SNP.2:1557705 chr02:001557705 0 W/1557705-1557705 FN2334 SNP G -> T AC=1;AN=192;BQB=0.776627;DP=5252;DP4=2509,2339,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.03419e-12;MQSB=0.679485;RPB=0.229983;SGB=-63.0652;VDB=0.368803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.2:1557705 chr02:001557705 0 W/1557705-1557705 FN3930-S SNP G -> T AC=1;AN=158;BQB=0.696325;DP=2848;DP4=1596,1108,16,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.12755e-16;MQSB=0.858043;RPB=0.984469;SGB=-11.3658;VDB=0.0221578;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.2:1557705 chr02:001557705 0 W/1557705-1557705 FN727-S Single Base Substitution G-T INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN-192.SNP.2:1558171 chr02:001558171 0 W/1558171-1558171 FN-192 Single Base Substitution A-G INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN-192.SNP.2:1558182 chr02:001558182 0 W/1558182-1558182 FN-192 Single Base Substitution A-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1216-S.SNP.2:1558480 chr02:001558480 0 W/1558480-1558480 FN1216-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1124-S.SNP.2:1565670 chr02:001565670 0 W/1565670-1565670 FN1124-S Single Base Substitution T-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN-314.SNP.2:1571789 chr02:001571789 0 W/1571789-1571789 FN-314 Single Base Substitution A-T INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1559-S.SNP.2:1580074 chr02:001580074 0 W/1580074-1580074 FN1559-S Single Base Substitution G-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3558-S.SNP.2:1584881 chr02:001584881 0 W/1584881-1584881 FN3558-S SNP A -> G AC=1;AN=188;BQB=0.975761;DP=3201;DP4=1538,1573,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.3735e-10;MQSB=0.995803;RPB=0.993955;SGB=43.0708;VDB=0.581373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.2:1586101 chr02:001586101 0 W/1586101-1586101 FN1636-S Single Base Substitution T-C INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN3698-S.SNP.2:1592011 chr02:001592011 0 W/1592011-1592011 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.162896;DP=2880;DP4=1406,1380,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000118566;MQSB=0.845205;RPB=0.626091;SGB=62.7569;VDB=0.967225;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.2:1593266 chr02:001593266 0 W/1593266-1593266 FN882-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g03780 hypothetical protein SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN-95.SNP.2:1594096 chr02:001594096 0 W/1594096-1594096 FN-95 Single Base Substitution A-T INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3286-S.SNP.2:1595796 chr02:001595796 0 W/1595796-1595796 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.920336;DP=2773;DP4=1413,1242,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32342e-10;MQSB=0.518009;RPB=0.797928;SGB=71.3514;VDB=0.159591;EFF=INTRON(MODIFIER||||362|LOC_Os02g03790|protein_coding|CODING|LOC_Os02g03790.1|1|1) FN1261-S.SNP.2:1610250 chr02:001610250 0 W/1610250-1610250 FN1261-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1618-S.SNP.2:1616462 chr02:001616462 0 W/1616462-1616462 FN1618-S Single Base Substitution C-G INTERGENIC Homo SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN4302-S.SNP.2:1618642 chr02:001618642 0 W/1618642-1618642 FN4302-S SNP C -> A AC=1;AN=170;BQB=0.872266;DP=2751;DP4=1241,1437,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.04544e-11;MQSB=0.999511;RPB=0.338396;SGB=70.0854;VDB=0.995594;EFF=INTRON(MODIFIER||||3052|LOC_Os02g03840|protein_coding|CODING|LOC_Os02g03840.2|1|1) FN-12.SNP.2:1621900 chr02:001621900 0 W/1621900-1621900 FN-12 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os02g03840 expressed protein SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN3925-S.SNP.2:1626417 chr02:001626417 0 W/1626417-1626417 FN3925-S SNP A -> G AC=2;AN=158;BQB=0.632832;DP=2440;DP4=1001,1332,20,27;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.25997e-23;MQSB=0.965551;RPB=0.106636;SGB=166.816;VDB=0.170328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N2128D|3052|LOC_Os02g03840|protein_coding|CODING|LOC_Os02g03840.2|5|1),SPLICE_SITE_REGION(LOW||||3052|LOC_Os02g03840|protein_coding|CODING|LOC_Os02g03840.2|5|1) FN3606-S.SNP.2:1631538 chr02:001631538 0 W/1631538-1631538 FN3606-S SNP A -> G AC=1;AN=190;BQB=0.980837;DP=2758;DP4=1382,1317,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78971e-09;MQSB=0.872522;RPB=0.793133;SGB=67.3108;VDB=0.668172;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.2:1655020 chr02:001655020 0 W/1655020-1655020 FN952-S Single Base Substitution G-A INTRON HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2573-S.SNP.2:1669639 chr02:001669639 0 W/1669639-1669639 FN2573-S SNP A -> C AC=1;AN=198;BQB=0.0340841;DP=4291;DP4=1834,2239,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233046;MQB=7.95273e-07;MQSB=0.998056;RPB=0.998994;SGB=16.3688;VDB=0.302434;EFF=INTRON(MODIFIER||||871|LOC_Os02g03930|protein_coding|CODING|LOC_Os02g03930.1|1|1) FN3459-S.SNP.2:1678364 chr02:001678364 0 W/1678364-1678364 FN3459-S SNP T -> C AC=1;AN=184;BQB=0.890809;DP=2562;DP4=1405,1034,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.07482e-08;MQSB=0.938327;RPB=0.449289;SGB=32.2261;VDB=0.102893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.2:1684045 chr02:001684045 0 W/1684045-1684045 FN2126-S SNP C -> A AC=1;AN=168;BQB=0.185132;DP=4020;DP4=2189,1777,22,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.28013e-16;MQSB=0.99303;RPB=0.462296;SGB=-218.88;VDB=0.912939;EFF=INTRON(MODIFIER||||226|LOC_Os02g03950|protein_coding|CODING|LOC_Os02g03950.4|5|1),INTRON(MODIFIER||||272|LOC_Os02g03950|protein_coding|CODING|LOC_Os02g03950.1|6|1),INTRON(MODIFIER||||272|LOC_Os02g03950|protein_coding|CODING|LOC_Os02g03950.2|6|1),INTRON(MODIFIER||||272|LOC_Os02g03950|protein_coding|CODING|LOC_Os02g03950.3|6|1),INTRON(MODIFIER||||210|LOC_Os02g03950|protein_coding|CODING|LOC_Os02g03950.5|6|1) FN2423.SNP.2:1689917 chr02:001689917 0 W/1689917-1689917 FN2423 SNP A -> T AC=1;AN=200;BQB=0.967184;DP=5167;DP4=2327,2237,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000193536;MQB=1.83008e-16;MQSB=0.497446;RPB=0.953479;SGB=28.752;VDB=0.537757;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.2:1697287 chr02:001697287 0 W/1697287-1697287 FN1734-S SNP T -> A AC=1;AN=188;BQB=1.06607e-05;DP=2975;DP4=1914,957,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000680887;MQSB=0.999925;RPB=0.191551;SGB=-314.946;VDB=0.489826;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.2:1705888 chr02:001705888 0 W/1705888-1705888 FN3422-S SNP A -> T AC=2;AN=184;BQB=0.133584;DP=1236;DP4=557,577,5,6;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=9.13096e-05;MQSB=0.969512;RPB=0.906173;SGB=13.188;VDB=0.61315;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.2:1705888 chr02:001705888 0 W/1705888-1705888 FN678-S Single Base Substitution A-T INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN963-S.SNP.2:1705888 chr02:001705888 0 W/1705888-1705888 FN963-S Single Base Substitution A-T INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3422-S.SNP.2:1705895 chr02:001705895 0 W/1705895-1705895 FN3422-S SNP T -> A AC=2;AN=184;BQB=0.961512;DP=1237;DP4=553,606,3,8;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.15252e-05;MQSB=0.997607;RPB=0.893436;SGB=44.2207;VDB=0.190776;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.2:1705895 chr02:001705895 0 W/1705895-1705895 FN678-S Single Base Substitution T-A INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN963-S.SNP.2:1705895 chr02:001705895 0 W/1705895-1705895 FN963-S Single Base Substitution T-A INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN936-S.SNP.2:1721395 chr02:001721395 0 W/1721395-1721395 FN936-S Single Base Substitution C-A INTERGENIC HOMO SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3883-S.SNP.2:1721901 chr02:001721901 0 W/1721901-1721901 FN3883-S SNP T -> A AC=1;AN=158;BQB=0.860747;DP=2712;DP4=1264,1329,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.63644e-08;MQSB=0.999981;RPB=0.985502;SGB=51.4366;VDB=0.643899;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.2:1730410 chr02:001730410 0 W/1730410-1730410 FN_N1-119-1 Single Base Substitution A-G Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2645-S.SNP.2:1730471 chr02:001730471 0 W/1730471-1730471 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.948717;DP=5443;DP4=2491,2709,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68685e-15;MQSB=0.987585;RPB=0.859624;SGB=79.9264;VDB=0.794438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.2:1730472 chr02:001730472 0 W/1730472-1730472 FN2645-S SNP T -> A AC=1;AN=200;BQB=0.967106;DP=5436;DP4=2528,2695,7,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52753e-14;MQSB=0.998518;RPB=0.743851;SGB=104.921;VDB=0.740269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.2:1742207 chr02:001742207 0 W/1742207-1742207 FN2483 SNP G -> A AC=1;AN=200;BQB=0.65248;DP=5353;DP4=2409,2534,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07673e-08;MQSB=0.662809;RPB=0.602658;SGB=6.27959;VDB=0.949006;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.2:1747517 chr02:001747517 0 W/1747517-1747517 FN_949-1 Single Base Substitution A-G Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN3412-S.SNP.2:1756296 chr02:001756296 0 W/1756296-1756296 FN3412-S SNP T -> C AC=1;AN=184;BQB=0.990431;DP=2446;DP4=1192,1184,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44396e-09;MQSB=0.952102;RPB=0.983053;SGB=57.786;VDB=0.41004;EFF=INTRON(MODIFIER||||494|LOC_Os02g04040|protein_coding|CODING|LOC_Os02g04040.1|6|1) FN3386-S.SNP.2:1756838 chr02:001756838 0 W/1756838-1756838 FN3386-S SNP T -> G AC=2;AN=184;BQB=0.980091;DP=2597;DP4=1157,1354,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06181e-14;MQSB=0.999901;RPB=0.985668;SGB=70.9657;VDB=0.908176;EFF=INTRON(MODIFIER||||494|LOC_Os02g04040|protein_coding|CODING|LOC_Os02g04040.1|4|1) FN2223-S.SNP.2:1769781 chr02:001769781 0 W/1769781-1769781 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.842797;DP=4286;DP4=2085,1957,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00933271;MQB=0.44476;MQSB=8.39889e-05;RPB=0.126173;SGB=71.6393;VDB=0.0916762;EFF=INTRON(MODIFIER||||1033|LOC_Os02g04070|protein_coding|CODING|LOC_Os02g04070.1|1|1) FN3840-S.SNP.2:1773967 chr02:001773967 0 W/1773967-1773967 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.986566;DP=2541;DP4=1275,1200,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35346e-09;MQSB=0.88131;RPB=0.882858;SGB=58.2031;VDB=0.523781;EFF=INTRON(MODIFIER||||885|LOC_Os02g04080|protein_coding|CODING|LOC_Os02g04080.1|14|1) FN1692-S.SNP.2:1784543 chr02:001784543 0 W/1784543-1784543 FN1692-S SNP G -> T AC=1;AN=188;BQB=0.961544;DP=2230;DP4=753,1428,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.05773e-08;MQSB=0.975771;RPB=0.843007;SGB=2.45162;VDB=0.759007;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.2:1792468 chr02:001792468 0 W/1792468-1792468 FN1020-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1525-S.SNP.2:1799984 chr02:001799984 0 W/1799984-1799984 FN1525-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3748-S.SNP.2:1801705 chr02:001801705 0 W/1801705-1801705 FN3748-S SNP T -> C AC=1;AN=190;BQB=0.824516;DP=3235;DP4=1412,1601,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18439e-13;MQSB=0.86453;RPB=0.62434;SGB=-10.4526;VDB=0.306824;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.2:1801938 chr02:001801938 0 W/1801938-1801938 FN-90 Single Base Substitution T-A INTERGENIC HOMO SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-90.SNP.2:1801939 chr02:001801939 0 W/1801939-1801939 FN-90 Single Base Substitution G-A INTERGENIC HOMO SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-175.SNP.2:1826165 chr02:001826165 0 W/1826165-1826165 FN-175 Single Base Substitution T-G UTR_3_PRIME HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3438-S.SNP.2:1826526 chr02:001826526 0 W/1826526-1826526 FN3438-S SNP A -> C AC=1;AN=184;BQB=0.923844;DP=2746;DP4=1441,1205,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.18863e-09;MQSB=0.963192;RPB=0.995379;SGB=25.7969;VDB=0.548672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.2:1831365 chr02:001831365 0 W/1831365-1831365 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.517594;DP=4402;DP4=1998,2130,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19253e-06;MQSB=0.923567;RPB=0.726162;SGB=32.5467;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.2:1839167 chr02:001839167 0 W/1839167-1839167 FN1219-S Single Base Substitution C-G INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2310.SNP.2:1840026 chr02:001840026 0 W/1840026-1840026 FN2310 SNP C -> T AC=1;AN=192;BQB=0.992527;DP=3849;DP4=1957,1592,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=27;MQ0F=0.274617;MQB=0.779777;MQSB=0;RPB=0.351893;SGB=39.78;VDB=0.262455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.2:1849852 chr02:001849852 0 W/1849852-1849852 FN2749-S SNP A -> T AC=2;AN=200;BQB=0.479484;DP=4957;DP4=2527,2071,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.48554e-21;MQSB=0.98144;RPB=0.971654;SGB=86.7987;VDB=0.93529;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.2:1864415 chr02:001864415 0 W/1864415-1864415 FN-407 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g04240 wee1-like protein kinase, putative, expressed SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN543-S.SNP.2:1866270 chr02:001866270 0 W/1866270-1866270 FN543-S Single Base Substitution C-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2664-S.SNP.2:1870508 chr02:001870508 0 W/1870508-1870508 FN2664-S SNP G -> T AC=1;AN=200;BQB=0.796782;DP=4888;DP4=2456,2200,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.33452e-13;MQSB=0.952229;RPB=0.915547;SGB=91.1059;VDB=0.529664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.2:1873775 chr02:001873775 0 W/1873775-1873775 FN2544-S SNP C -> A AC=2;AN=198;BQB=0.770494;DP=3806;DP4=2029,1588,14,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.95375e-14;MQSB=0.871962;RPB=0.829348;SGB=76.1002;VDB=0.876329;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L129|371|LOC_Os02g04250|protein_coding|CODING|LOC_Os02g04250.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L243|485|LOC_Os02g04250|protein_coding|CODING|LOC_Os02g04250.1|3|1) FN926-S.SNP.2:1873775 chr02:001873775 0 W/1873775-1873775 FN926-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2468.SNP.2:1876780 chr02:001876780 0 W/1876780-1876780 FN2468 SNP C -> T AC=2;AN=200;BQB=0.420049;DP=4944;DP4=1946,2674,9,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.19547e-17;MQSB=0.576795;RPB=0.966149;SGB=97.9523;VDB=0.163414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.2:1882301 chr02:001882301 0 W/1882301-1882301 FN1755-S SNP G -> A AC=2;AN=188;BQB=0.574976;DP=2054;DP4=729,1250,4,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.13935e-14;MQSB=0.889272;RPB=0.354052;SGB=103.498;VDB=0.135404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S55L|337|LOC_Os02g04260|protein_coding|CODING|LOC_Os02g04260.1|1|1) FN-152.SNP.2:1885740 chr02:001885740 0 W/1885740-1885740 FN-152 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN4234-S.SNP.2:1889435 chr02:001889435 0 W/1889435-1889435 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.903131;DP=2645;DP4=1289,1303,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.20191e-06;MQSB=0.000173563;RPB=0.987629;SGB=31.4354;VDB=0.678262;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.2:1889442 chr02:001889442 0 W/1889442-1889442 FN-303 Single Base Substitution C-T INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN780-S.SNP.2:1901061 chr02:001901061 0 W/1901061-1901061 FN780-S Single Base Substitution C-T INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN2292.SNP.2:1901469 chr02:001901469 0 W/1901469-1901469 FN2292 SNP G -> A AC=1;AN=192;BQB=0.204521;DP=4174;DP4=1917,1844,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=15;MQ0F=0.483709;MQB=0.499084;MQSB=0.000617912;RPB=0.334122;SGB=23.7852;VDB=0.110236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.2:1906088 chr02:001906088 0 W/1906088-1906088 FN2433 SNP G -> T AC=1;AN=200;BQB=0.63312;DP=3922;DP4=1879,1808,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000254972;MQB=9.98673e-09;MQSB=0.946304;RPB=0.978699;SGB=26.8797;VDB=0.0811354;EFF=INTRON(MODIFIER||||154|LOC_Os02g04325|protein_coding|CODING|LOC_Os02g04325.1|1|1) FN-84.SNP.2:1909558 chr02:001909558 0 W/1909558-1909558 FN-84 Single Base Substitution T-G INTRON HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN539-S.SNP.2:1913396 chr02:001913396 0 W/1913396-1913396 FN539-S Single Base Substitution T-C INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2707-S.SNP.2:1919284 chr02:001919284 0 W/1919284-1919284 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.230454;DP=4652;DP4=2383,2031,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.61827e-10;MQSB=0.983941;RPB=0.307387;SGB=58.2954;VDB=0.0677271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.2:1920820 chr02:001920820 0 W/1920820-1920820 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.972463;DP=3670;DP4=1786,1630,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00027248;MQB=1.45715e-05;MQSB=0.972975;RPB=0.764042;SGB=5.98864;VDB=0.0618676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.2:1925202 chr02:001925202 0 W/1925202-1925202 FN1647-S Single Base Substitution C-G INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN465-S.SNP.2:1927267 chr02:001927267 0 W/1927267-1927267 FN465-S Single Base Substitution T-G INTERGENIC HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1640-S.SNP.2:1929448 chr02:001929448 0 W/1929448-1929448 FN1640-S Single Base Substitution A-G UTR_3_PRIME Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2378.SNP.2:1930294 chr02:001930294 0 W/1930294-1930294 FN2378 SNP C -> T AC=1;AN=192;BQB=0.978379;DP=5243;DP4=2370,2603,27,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.34507e-23;MQSB=0.89178;RPB=0.781035;SGB=49.5922;VDB=0.311324;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.2:1931248 chr02:001931248 0 W/1931248-1931248 FN-127 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g04380 expressed protein SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1610-S.SNP.2:1931633 chr02:001931633 0 W/1931633-1931633 FN1610-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g04380 expressed protein SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3677-S.SNP.2:1933813 chr02:001933813 0 W/1933813-1933813 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.208265;DP=2751;DP4=1275,1203,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0109051;MQB=0.999844;MQSB=1.21109e-06;RPB=0.66603;SGB=-38.1089;VDB=0.509735;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.2:1941378 chr02:001941378 0 W/1941378-1941378 FN3809-S SNP G -> T AC=1;AN=190;BQB=0.212052;DP=3772;DP4=2081,1586,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.111877;MQB=0.265453;MQSB=4.90686e-13;RPB=0.806241;SGB=28.9929;VDB=0.999763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.2:1944533 chr02:001944533 0 W/1944533-1944533 FN2441 SNP A -> G AC=1;AN=200;BQB=0.66565;DP=4504;DP4=1809,2192,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.722e-09;MQSB=0.864637;RPB=0.997414;SGB=32.0901;VDB=0.638457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.2:1945392 chr02:001945392 0 W/1945392-1945392 FN3676-S SNP C -> T AC=1;AN=190;BQB=0.991979;DP=2804;DP4=1277,1389,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.40034e-05;MQSB=0.650888;RPB=0.920829;SGB=25.439;VDB=0.380974;EFF=INTRON(MODIFIER||||256|LOC_Os02g04410|protein_coding|CODING|LOC_Os02g04410.1|1|1) FN2359.SNP.2:1947985 chr02:001947985 0 W/1947985-1947985 FN2359 SNP G -> A AC=1;AN=192;BQB=0.924439;DP=4908;DP4=2320,2310,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.81112e-14;MQSB=0.924698;RPB=0.691642;SGB=16.7409;VDB=0.0944528;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A304|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A304|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A304|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.2|2|1) FN2781-S.SNP.2:1948097 chr02:001948097 0 W/1948097-1948097 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.1916;DP=4427;DP4=1982,2227,8,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.9165e-18;MQSB=0.981871;RPB=0.950839;SGB=90.4807;VDB=0.303638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P267L|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P267L|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P267L|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.2|2|1) FN2781-S.SNP.2:1948098 chr02:001948098 0 W/1948098-1948098 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.706413;DP=4431;DP4=1979,2221,8,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32622e-16;MQSB=0.947754;RPB=0.988816;SGB=86.8856;VDB=0.281907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P267S|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P267S|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P267S|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.2|2|1) FN2781-S.SNP.2:1948102 chr02:001948102 0 W/1948102-1948102 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.270766;DP=4437;DP4=1975,2211,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32724e-16;MQSB=0.999067;RPB=0.938162;SGB=109.285;VDB=0.342994;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L265|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L265|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L265|351|LOC_Os02g04420|protein_coding|CODING|LOC_Os02g04420.2|2|1) W423-5-1.SNP.2:1962463 chr02:001962463 0 W/1962463-1962463 W423-5-1 Single Base Substitution A-G INTRON HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN1455-S.SNP.2:1963268 chr02:001963268 0 W/1963268-1963268 FN1455-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g04440 transducin family protein, putative, expressed SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN803-S.SNP.2:1967771 chr02:001967771 0 W/1967771-1967771 FN803-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2441.SNP.2:1970278 chr02:001970278 0 W/1970278-1970278 FN2441 SNP C -> T AC=1;AN=200;BQB=0.959527;DP=4720;DP4=2124,2333,19,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13964e-17;MQSB=0.874043;RPB=0.343165;SGB=112.373;VDB=0.0511555;EFF=INTRON(MODIFIER||||329|LOC_Os02g04450|protein_coding|CODING|LOC_Os02g04450.1|4|1),INTRON(MODIFIER||||306|LOC_Os02g04450|protein_coding|CODING|LOC_Os02g04450.2|4|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||294|LOC_Os02g04450|protein_coding|CODING|LOC_Os02g04450.3|2|1),INTRON(MODIFIER||||308|LOC_Os02g04450|protein_coding|CODING|LOC_Os02g04450.4|4|1),INTRON(MODIFIER||||306|LOC_Os02g04450|protein_coding|CODING|LOC_Os02g04450.5|3|1|WARNING_TRANSCRIPT_INCOMPLETE) FN862-S.SNP.2:1970538 chr02:001970538 0 W/1970538-1970538 FN862-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g04450 plant-specific domain TIGR01589 family protein, putative, expressed SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN_N1-26-1.SNP.2:1992086 chr02:001992086 0 W/1992086-1992086 FN_N1-26-1 Single Base Substitution G-A HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN3861-S.SNP.2:2029104 chr02:002029104 0 W/2029104-2029104 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.887956;DP=2209;DP4=843,1292,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.54306e-07;MQSB=0.863719;RPB=0.772414;SGB=30.704;VDB=0.638723;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.2:2044212 chr02:002044212 0 W/2044212-2044212 FN-99 Single Base Substitution C-A INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1477-S.SNP.2:2044212 chr02:002044212 0 W/2044212-2044212 FN1477-S Single Base Substitution C-A INTERGENIC Homo SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN926-S.SNP.2:2045777 chr02:002045777 0 W/2045777-2045777 FN926-S Single Base Substitution T-A INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1056-S.SNP.2:2069262 chr02:002069262 0 W/2069262-2069262 FN1056-S Single Base Substitution G-T INTERGENIC HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN857-S.SNP.2:2071176 chr02:002071176 0 W/2071176-2071176 FN857-S Single Base Substitution G-A INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN678-S.SNP.2:2072279 chr02:002072279 0 W/2072279-2072279 FN678-S Single Base Substitution A-G INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN678-S.SNP.2:2072281 chr02:002072281 0 W/2072281-2072281 FN678-S Single Base Substitution G-T INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2139-S.SNP.2:2080935 chr02:002080935 0 W/2080935-2080935 FN2139-S SNP C -> G AC=1;AN=168;BQB=0.793393;DP=3856;DP4=1846,1962,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.98323e-12;MQSB=0.934692;RPB=0.900927;SGB=-42.3508;VDB=0.614017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.2:2082331 chr02:002082331 0 W/2082331-2082331 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.530165;DP=4768;DP4=2546,1887,30,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.19641e-21;MQSB=0.956803;RPB=0.846013;SGB=76.378;VDB=0.302381;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.2:2082542 chr02:002082542 0 W/2082542-2082542 W42-1-3S-1 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-289.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN-289 Single Base Substitution C-T INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN1043-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN1043-S Single Base Substitution C-T INTERGENIC HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1070-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN1070-S Single Base Substitution C-T INTERGENIC HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1230-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN1230-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN3110-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN3110-S SNP C -> T AC=2;AN=184;BQB=0.848787;DP=3102;DP4=1528,1314,25,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.6534e-26;MQSB=0.695407;RPB=0.971253;SGB=128.996;VDB=0.679285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.96767;DP=2613;DP4=1270,1151,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.31093e-10;MQSB=0.885024;RPB=0.81102;SGB=28.7675;VDB=0.922411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.966681;DP=2371;DP4=1106,1080,14,22;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65791e-20;MQSB=0.736546;RPB=0.807198;SGB=71.2076;VDB=0.777821;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN552-S Single Base Substitution C-T INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN565-S.SNP.2:2086172 chr02:002086172 0 W/2086172-2086172 FN565-S Single Base Substitution C-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN778-S.SNP.2:2106300 chr02:002106300 0 W/2106300-2106300 FN778-S Single Base Substitution G-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3294-S.SNP.2:2107696 chr02:002107696 0 W/2107696-2107696 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.812365;DP=2867;DP4=1273,1419,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.92249e-08;MQSB=0.836663;RPB=0.999783;SGB=75.8731;VDB=0.85243;EFF=INTRON(MODIFIER||||469|LOC_Os02g04680|protein_coding|CODING|LOC_Os02g04680.1|3|1),INTRON(MODIFIER||||468|LOC_Os02g04680|protein_coding|CODING|LOC_Os02g04680.2|3|1) FN-249.SNP.2:2111402 chr02:002111402 0 W/2111402-2111402 FN-249 Single Base Substitution A-T INTRON HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1322-S.SNP.2:2123808 chr02:002123808 0 W/2123808-2123808 FN1322-S Single Base Substitution G-A INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN2637-S.SNP.2:2124220 chr02:002124220 0 W/2124220-2124220 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.969729;DP=5009;DP4=2473,2281,10,13;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0171691;MQB=0.0833878;MQSB=0.907353;RPB=0.970381;SGB=72.7161;VDB=0.0499959;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.2:2126209 chr02:002126209 0 W/2126209-2126209 FN2241-S SNP C -> A AC=1;AN=190;BQB=0.500027;DP=4744;DP4=2382,2080,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56896e-09;MQSB=0.921238;RPB=0.360853;SGB=23.6597;VDB=0.814147;EFF=INTRON(MODIFIER||||508|LOC_Os02g04700|protein_coding|CODING|LOC_Os02g04700.1|3|1),INTRON(MODIFIER||||353|LOC_Os02g04700|protein_coding|CODING|LOC_Os02g04700.2|4|1) FN2241-S.SNP.2:2126210 chr02:002126210 0 W/2126210-2126210 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.558151;DP=4743;DP4=2437,2089,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.54864e-09;MQSB=0.909493;RPB=0.91098;SGB=26.2136;VDB=0.857478;EFF=INTRON(MODIFIER||||508|LOC_Os02g04700|protein_coding|CODING|LOC_Os02g04700.1|3|1),INTRON(MODIFIER||||353|LOC_Os02g04700|protein_coding|CODING|LOC_Os02g04700.2|4|1) FN-381.SNP.2:2126247 chr02:002126247 0 W/2126247-2126247 FN-381 Single Base Substitution T-A INTRON HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN1563-S.SNP.2:2137491 chr02:002137491 0 W/2137491-2137491 FN1563-S Single Base Substitution A-G INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1563-S.SNP.2:2137493 chr02:002137493 0 W/2137493-2137493 FN1563-S Single Base Substitution T-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2753-S.SNP.2:2138606 chr02:002138606 0 W/2138606-2138606 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.98565;DP=4798;DP4=2333,2169,11,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00020842;MQB=8.33588e-08;MQSB=0.926458;RPB=0.833435;SGB=76.3213;VDB=0.365199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.2:2142281 chr02:002142281 0 W/2142281-2142281 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.943314;DP=2578;DP4=1242,1222,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46304e-07;MQSB=0.942926;RPB=0.876225;SGB=32.5467;VDB=0.503225;EFF=START_GAINED(LOW||||82|LOC_Os02g04725|protein_coding|CODING|LOC_Os02g04725.3|2|1),UTR_5_PRIME(MODIFIER||101||82|LOC_Os02g04725|protein_coding|CODING|LOC_Os02g04725.3|2|1),INTRON(MODIFIER||||82|LOC_Os02g04725|protein_coding|CODING|LOC_Os02g04725.1|2|1),INTRON(MODIFIER||||82|LOC_Os02g04725|protein_coding|CODING|LOC_Os02g04725.2|2|1) FN526-S.SNP.2:2144981 chr02:002144981 0 W/2144981-2144981 FN526-S Single Base Substitution C-T INTERGENIC HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2349.SNP.2:2158745 chr02:002158745 0 W/2158745-2158745 FN2349 SNP C -> T AC=1;AN=192;BQB=0.31024;DP=4864;DP4=2438,2130,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42093e-19;MQSB=0.883027;RPB=0.668161;SGB=-78.8574;VDB=0.179737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.2:2158824 chr02:002158824 0 W/2158824-2158824 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.0758818;DP=4563;DP4=2170,2000,19,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.20212e-18;MQSB=0.991058;RPB=0.26896;SGB=-92.1379;VDB=0.887117;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.2:2167131 chr02:002167131 0 W/2167131-2167131 FN4093-S SNP A -> T AC=1;AN=182;BQB=0.331388;DP=3497;DP4=1763,1626,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=26;MQ0F=0.179868;MQB=0.739227;MQSB=0;RPB=0.740505;SGB=28.1658;VDB=0.816962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.2:2174147 chr02:002174147 0 W/2174147-2174147 FN2378 SNP G -> T AC=1;AN=192;BQB=0.484747;DP=4041;DP4=1617,2023,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0103935;MQB=0.233093;MQSB=0.513795;RPB=0.65747;SGB=85.7252;VDB=0.496897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.2:2175584 chr02:002175584 0 W/2175584-2175584 FN2166-S SNP G -> A AC=1;AN=168;BQB=2.57257e-08;DP=3064;DP4=1190,1718,30,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000405978;MQSB=0.974626;RPB=0.0824055;SGB=-1021.09;VDB=0.0808965;EFF=INTRON(MODIFIER||||288|LOC_Os02g04760|protein_coding|CODING|LOC_Os02g04760.1|3|1) FN4164-S.SNP.2:2177138 chr02:002177138 0 W/2177138-2177138 FN4164-S SNP T -> A AC=1;AN=170;BQB=0.996965;DP=1905;DP4=738,1098,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.16015e-07;MQSB=0.961213;RPB=0.337874;SGB=27.9928;VDB=0.54425;EFF=INTRON(MODIFIER||||288|LOC_Os02g04760|protein_coding|CODING|LOC_Os02g04760.1|2|1) FN677-S.SNP.2:2178229 chr02:002178229 0 W/2178229-2178229 FN677-S Single Base Substitution G-T INTRON HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3705-S.SNP.2:2180180 chr02:002180180 0 W/2180180-2180180 FN3705-S SNP C -> A AC=1;AN=190;BQB=0.974895;DP=2294;DP4=917,1289,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000254512;MQSB=0.674598;RPB=0.997165;SGB=18.3316;VDB=0.96514;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.2:2182042 chr02:002182042 0 W/2182042-2182042 FN888-S Single Base Substitution C-T INTRON HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2535-S.SNP.2:2182351 chr02:002182351 0 W/2182351-2182351 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.982829;DP=3986;DP4=1791,2037,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.80505e-09;MQSB=0.98251;RPB=0.943272;SGB=67.9293;VDB=0.274938;EFF=INTRON(MODIFIER||||79|LOC_Os02g04770|protein_coding|CODING|LOC_Os02g04770.1|1|1) FN1421-S.SNP.2:2185648 chr02:002185648 0 W/2185648-2185648 FN1421-S Single Base Substitution A-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2333.SNP.2:2185883 chr02:002185883 0 W/2185883-2185883 FN2333 SNP G -> A AC=1;AN=192;BQB=0.984607;DP=5516;DP4=2307,2786,6,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.44968e-10;MQSB=0.999816;RPB=0.957811;SGB=-61.6295;VDB=0.299512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.2:2196359 chr02:002196359 0 W/2196359-2196359 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.983777;DP=2990;DP4=1395,1490,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47239e-10;MQSB=0.953633;RPB=0.941709;SGB=43.2083;VDB=0.609133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.2:2196779 chr02:002196779 0 W/2196779-2196779 FN3804-S SNP T -> C AC=1;AN=190;BQB=0.998898;DP=2522;DP4=1125,1319,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.88163e-11;MQSB=0.972009;RPB=0.912554;SGB=80.9724;VDB=0.73263;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.2:2198902 chr02:002198902 0 W/2198902-2198902 FN-191 Single Base Substitution T-C INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3504-S.SNP.2:2201745 chr02:002201745 0 W/2201745-2201745 FN3504-S SNP C -> A AC=1;AN=188;BQB=0.957449;DP=3716;DP4=1933,1727,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000269107;MQB=3.56234e-06;MQSB=0.998934;RPB=0.968581;SGB=35.3493;VDB=0.208395;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W198L|347|LOC_Os02g04790|protein_coding|CODING|LOC_Os02g04790.1|1|1) FN624-S.SNP.2:2202603 chr02:002202603 0 W/2202603-2202603 FN624-S Single Base Substitution T-C INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2180-S.SNP.2:2202726 chr02:002202726 0 W/2202726-2202726 FN2180-S SNP T -> A AC=2;AN=190;BQB=0.664324;DP=4189;DP4=1941,1794,19,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00023872;MQB=2.84038e-17;MQSB=0.0170756;RPB=0.368541;SGB=124.947;VDB=0.191596;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.2:2213354 chr02:002213354 0 W/2213354-2213354 FN-160 Single Base Substitution A-T INTRON HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN554-S.SNP.2:2213546 chr02:002213546 0 W/2213546-2213546 FN554-S Single Base Substitution A-T INTRON HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3673-S.SNP.2:2220681 chr02:002220681 0 W/2220681-2220681 FN3673-S SNP C -> T AC=1;AN=190;BQB=0.905421;DP=3028;DP4=1430,1505,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08927e-08;MQSB=0.991654;RPB=0.382547;SGB=53.6492;VDB=0.81207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.2:2224972 chr02:002224972 0 W/2224972-2224972 FN3296-S SNP G -> A AC=1;AN=184;BQB=0.98209;DP=2820;DP4=1544,1192,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0276596;MQB=0.145663;MQSB=0.0289373;RPB=0.998001;SGB=25.7969;VDB=0.282545;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.2:2249828 chr02:002249828 0 W/2249828-2249828 FN-342 Single Base Substitution A-G INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3659-S.SNP.2:2253004 chr02:002253004 0 W/2253004-2253004 FN3659-S SNP G -> T AC=2;AN=190;BQB=0.769516;DP=2714;DP4=1192,1416,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.95329e-09;MQSB=0.0102505;RPB=0.922753;SGB=85.5263;VDB=0.988667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.2:2255879 chr02:002255879 0 W/2255879-2255879 FN1220-S Single Base Substitution G-A INTRON HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-63.SNP.2:2256866 chr02:002256866 0 W/2256866-2256866 FN-63 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g04880 expressed protein SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2175-S.SNP.2:2262697 chr02:002262697 0 W/2262697-2262697 FN2175-S SNP C -> T AC=1;AN=168;BQB=0.269805;DP=2945;DP4=1792,1109,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0010656;MQSB=0.967809;RPB=0.63306;SGB=-16.665;VDB=0.967919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.2:2267527 chr02:002267527 0 W/2267527-2267527 FN1380-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g04910 transposon protein, putative, unclassified, expressed SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1202-S.SNP.2:2284005 chr02:002284005 0 W/2284005-2284005 FN1202-S Single Base Substitution C-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN630-S.SNP.2:2286883 chr02:002286883 0 W/2286883-2286883 FN630-S Single Base Substitution C-T INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN630-S.SNP.2:2286884 chr02:002286884 0 W/2286884-2286884 FN630-S Single Base Substitution A-T INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN753-S.SNP.2:2290328 chr02:002290328 0 W/2290328-2290328 FN753-S Single Base Substitution C-T INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN367-S.SNP.2:2290331 chr02:002290331 0 W/2290331-2290331 FN367-S Single Base Substitution C-A INTERGENIC HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN1257-S.SNP.2:2296406 chr02:002296406 0 W/2296406-2296406 FN1257-S Single Base Substitution A-T INTRON HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2410.SNP.2:2297823 chr02:002297823 0 W/2297823-2297823 FN2410 SNP G -> T AC=1;AN=200;BQB=0.566827;DP=4244;DP4=2124,1891,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00070688;MQB=1.34884e-09;MQSB=0.703071;RPB=0.930599;SGB=91.1059;VDB=0.229227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D166Y|1687|LOC_Os02g04940|protein_coding|CODING|LOC_Os02g04940.1|2|1) FN3522-S.SNP.2:2298355 chr02:002298355 0 W/2298355-2298355 FN3522-S SNP T -> C AC=2;AN=188;BQB=0.844682;DP=3079;DP4=1489,1330,11,14;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0422215;MQB=0.850347;MQSB=0.0237496;RPB=0.558125;SGB=108.042;VDB=0.282338;EFF=SPLICE_SITE_REGION(LOW||||1687|LOC_Os02g04940|protein_coding|CODING|LOC_Os02g04940.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F206|1687|LOC_Os02g04940|protein_coding|CODING|LOC_Os02g04940.1|3|1) FN873-S.SNP.2:2307168 chr02:002307168 0 W/2307168-2307168 FN873-S Single Base Substitution C-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1499-S.SNP.2:2308978 chr02:002308978 0 W/2308978-2308978 FN1499-S Single Base Substitution A-G INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2140-S.SNP.2:2312558 chr02:002312558 0 W/2312558-2312558 FN2140-S SNP T -> C AC=2;AN=168;BQB=0.128114;DP=3827;DP4=1907,1842,26,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.27991e-28;MQSB=0.999634;RPB=0.565533;SGB=-63.4106;VDB=0.0289225;EFF=INTRON(MODIFIER||||161|LOC_Os02g04945|protein_coding|CODING|LOC_Os02g04945.1|13|1) FN2429.SNP.2:2313894 chr02:002313894 0 W/2313894-2313894 FN2429 SNP C -> T AC=1;AN=200;BQB=0.681697;DP=4456;DP4=2105,2082,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9982e-12;MQSB=0.584188;RPB=0.99975;SGB=69.1109;VDB=0.144949;EFF=INTRON(MODIFIER||||161|LOC_Os02g04945|protein_coding|CODING|LOC_Os02g04945.1|8|1) FN1200-S.SNP.2:2314944 chr02:002314944 0 W/2314944-2314944 FN1200-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2197-S.SNP.2:2317801 chr02:002317801 0 W/2317801-2317801 FN2197-S SNP G -> A AC=2;AN=190;BQB=0.1968;DP=4117;DP4=1849,2010,8,15;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0.201846;MQB=0.433511;MQSB=0;RPB=0.540928;SGB=99.1879;VDB=0.274563;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.2:2318530 chr02:002318530 0 W/2318530-2318530 FN2182-S SNP A -> T AC=1;AN=190;BQB=0.237581;DP=4972;DP4=2469,2207,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201126;MQB=2.0201e-17;MQSB=0.0684008;RPB=0.113072;SGB=131.065;VDB=0.246242;EFF=UTR_3_PRIME(MODIFIER||1230||737|LOC_Os02g04950|protein_coding|CODING|LOC_Os02g04950.1|2|1) FN2182-S.SNP.2:2318531 chr02:002318531 0 W/2318531-2318531 FN2182-S SNP C -> T AC=1;AN=190;BQB=0.990363;DP=4981;DP4=2485,2194,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200763;MQB=2.13688e-17;MQSB=0.142649;RPB=0.109908;SGB=96.5165;VDB=0.234798;EFF=UTR_3_PRIME(MODIFIER||1229||737|LOC_Os02g04950|protein_coding|CODING|LOC_Os02g04950.1|2|1) FN2151-S.SNP.2:2330976 chr02:002330976 0 W/2330976-2330976 FN2151-S SNP T -> C AC=1;AN=168;BQB=0.0231039;DP=3582;DP4=1709,1800,6,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000468502;MQSB=0.973617;RPB=0.991386;SGB=-192.054;VDB=0.437226;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.2:2357517 chr02:002357517 0 W/2357517-2357517 FN2580-S SNP C -> T AC=1;AN=198;BQB=0.534201;DP=4075;DP4=1978,1900,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.31013e-11;MQSB=0.853051;RPB=0.91638;SGB=65.3149;VDB=0.203515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.2:2360753 chr02:002360753 0 W/2360753-2360753 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN590-S.SNP.2:2363295 chr02:002363295 0 W/2363295-2363295 FN590-S Single Base Substitution A-G INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1112-S.SNP.2:2365089 chr02:002365089 0 W/2365089-2365089 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3889-S.SNP.2:2366419 chr02:002366419 0 W/2366419-2366419 FN3889-S SNP G -> T AC=1;AN=158;BQB=0.998017;DP=2670;DP4=1249,1322,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0149813;MQB=4.72423e-05;MQSB=0.00138337;RPB=0.836862;SGB=57.6596;VDB=0.80774;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.2:2380426 chr02:002380426 0 W/2380426-2380426 FN996-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g05020 hypothetical protein SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3599-S.SNP.2:2390211 chr02:002390211 0 W/2390211-2390211 FN3599-S SNP C -> T AC=2;AN=188;BQB=0.95131;DP=2360;DP4=1279,1015,11,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.7503e-12;MQSB=0.697603;RPB=0.505524;SGB=85.3253;VDB=0.160099;EFF=INTRON(MODIFIER||||423|LOC_Os02g05030|protein_coding|CODING|LOC_Os02g05030.1|1|1) FN4247-S.SNP.2:2412977 chr02:002412977 0 W/2412977-2412977 FN4247-S SNP C -> G AC=1;AN=170;BQB=0.999144;DP=2718;DP4=1342,1251,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.72839e-06;MQSB=0.716674;RPB=0.994451;SGB=-2.88077;VDB=0.39524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M121I|364|LOC_Os02g05070|protein_coding|CODING|LOC_Os02g05070.1|1|1) FN3795-S.SNP.2:2417777 chr02:002417777 0 W/2417777-2417777 FN3795-S SNP G -> A AC=1;AN=188;BQB=0.893325;DP=1461;DP4=261,1156,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.00397e-05;MQSB=0.278225;RPB=0.993123;SGB=14.7784;VDB=0.695271;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.2:2419907 chr02:002419907 0 W/2419907-2419907 FN4304-S SNP A -> G AC=1;AN=170;BQB=0.637366;DP=2441;DP4=1129,1203,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0090127;MQB=0.63659;MQSB=5.85673e-05;RPB=0.708848;SGB=47.8722;VDB=0.800523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.2:2423282 chr02:002423282 0 W/2423282-2423282 FN3347-S SNP A -> G AC=2;AN=184;BQB=0.923045;DP=2684;DP4=1164,1354,17,2;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.000372578;MQB=0.00628107;MQSB=3.93752e-27;RPB=0.838815;SGB=9.8459;VDB=0.434617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.2:2423358 chr02:002423358 0 W/2423358-2423358 FN3347-S SNP A -> C AC=2;AN=184;BQB=0.999867;DP=3020;DP4=1249,1634,23,18;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00596026;MQB=5.16512e-24;MQSB=0.040989;RPB=0.232739;SGB=-639.42;VDB=0.229419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.2:2423432 chr02:002423432 0 W/2423432-2423432 FN3347-S SNP T -> C AC=2;AN=184;BQB=0.983883;DP=3300;DP4=1352,1750,28,4;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.00848485;MQB=1.2637e-07;MQSB=2.23982e-15;RPB=0.399442;SGB=-6.88719;VDB=0.245094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.2:2424846 chr02:002424846 0 W/2424846-2424846 FN2723-S SNP C -> G AC=1;AN=200;BQB=0.918746;DP=4453;DP4=1916,2284,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14771e-11;MQSB=0.919826;RPB=0.924523;SGB=77.2904;VDB=0.0721029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.2:2425258 chr02:002425258 0 W/2425258-2425258 FN1535-S Single Base Substitution A-G INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN4134-S.SNP.2:2425830 chr02:002425830 0 W/2425830-2425830 FN4134-S SNP C -> T AC=1;AN=182;BQB=0.739728;DP=2893;DP4=1573,1267,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000150834;MQSB=0.95702;RPB=0.648044;SGB=39.6007;VDB=0.487917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.2:2425897 chr02:002425897 0 W/2425897-2425897 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.870964;DP=4601;DP4=2149,2156,26,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31029e-24;MQSB=0.975456;RPB=0.567181;SGB=50.7274;VDB=0.961831;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.2:2426465 chr02:002426465 0 W/2426465-2426465 FN598-S Single Base Substitution A-C INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2758-S.SNP.2:2437605 chr02:002437605 0 W/2437605-2437605 FN2758-S SNP T -> C AC=2;AN=200;BQB=0.497275;DP=4893;DP4=2232,2284,16,17;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0723483;MQB=0.00583669;MQSB=1.56459e-12;RPB=0.999469;SGB=71.1676;VDB=0.782183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.2:2441635 chr02:002441635 0 W/2441635-2441635 FN1268-S Single Base Substitution C-T INTRON HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3501-S.SNP.2:2447803 chr02:002447803 0 W/2447803-2447803 FN3501-S SNP A -> C AC=1;AN=188;BQB=0.975422;DP=2751;DP4=1343,1340,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.1787e-08;MQSB=0.912488;RPB=0.741623;SGB=32.441;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.2:2448033 chr02:002448033 0 W/2448033-2448033 FN3955-S SNP A -> T AC=1;AN=168;BQB=0.835393;DP=2664;DP4=1416,1156,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000375375;MQB=2.11623e-07;MQSB=0.999981;RPB=0.846206;SGB=41.6096;VDB=0.539953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.2:2458461 chr02:002458461 0 W/2458461-2458461 FN3407-S SNP G -> A AC=2;AN=184;BQB=0.857542;DP=2778;DP4=1306,1394,9,11;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0161987;MQB=0.013754;MQSB=6.62534e-42;RPB=0.911433;SGB=84.9167;VDB=0.469619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.2:2471933 chr02:002471933 0 W/2471933-2471933 FN3856-S SNP T -> A AC=1;AN=158;BQB=0.984788;DP=2583;DP4=1142,1312,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.45454e-08;MQSB=0.996261;RPB=0.990227;SGB=51.4366;VDB=0.553116;EFF=INTRON(MODIFIER||||674|LOC_Os02g05170|protein_coding|CODING|LOC_Os02g05170.1|2|1) FN4049-S.SNP.2:2476210 chr02:002476210 0 W/2476210-2476210 FN4049-S SNP G -> A AC=1;AN=168;BQB=0.893288;DP=2758;DP4=1307,1334,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.4627e-07;MQSB=0.986479;RPB=0.720907;SGB=41.6096;VDB=0.0120762;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1129V|1616|LOC_Os02g05180|protein_coding|CODING|LOC_Os02g05180.1|7|1) FN2629-S.SNP.2:2477547 chr02:002477547 0 W/2477547-2477547 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.973783;DP=4670;DP4=2387,2044,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.44195e-12;MQSB=0.928146;RPB=0.582977;SGB=91.1059;VDB=0.808333;EFF=INTRON(MODIFIER||||1616|LOC_Os02g05180|protein_coding|CODING|LOC_Os02g05180.1|5|1) FN2781-S.SNP.2:2481741 chr02:002481741 0 W/2481741-2481741 FN2781-S SNP T -> G AC=1;AN=198;BQB=0.568278;DP=4094;DP4=2042,1777,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0024426;MQB=1.79004e-12;MQSB=4.69745e-05;RPB=0.989833;SGB=83.2905;VDB=0.222261;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.2:2481961 chr02:002481961 0 W/2481961-2481961 FN476-S Single Base Substitution A-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3287-S.SNP.2:2482288 chr02:002482288 0 W/2482288-2482288 FN3287-S SNP T -> C AC=1;AN=184;BQB=0.998171;DP=2936;DP4=1292,1561,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.16574e-11;MQSB=0.932394;RPB=0.805413;SGB=80.3949;VDB=0.707225;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.2:2483561 chr02:002483561 0 W/2483561-2483561 FN440-S Single Base Substitution T-A INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2150-S.SNP.2:2492540 chr02:002492540 0 W/2492540-2492540 FN2150-S SNP G -> A AC=1;AN=168;BQB=0.0400354;DP=3686;DP4=2004,1640,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.78814e-12;MQSB=0.953291;RPB=0.335574;SGB=-42.92;VDB=0.747568;EFF=INTRON(MODIFIER||||301|LOC_Os02g05210|protein_coding|CODING|LOC_Os02g05210.1|1|1) FN2795-S.SNP.2:2495545 chr02:002495545 0 W/2495545-2495545 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.917465;DP=4286;DP4=2039,2058,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.48711e-11;MQSB=0.608414;RPB=0.886248;SGB=37.1297;VDB=0.80389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.2:2495545 chr02:002495545 0 W/2495545-2495545 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.480699;DP=2351;DP4=1176,1107,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.93223e-05;MQSB=0.589516;RPB=0.516352;SGB=37.4429;VDB=0.982089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.2:2496433 chr02:002496433 0 W/2496433-2496433 FN2307 SNP G -> A AC=1;AN=192;BQB=0.999865;DP=5049;DP4=2389,2321,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.51159e-08;MQSB=0.724197;RPB=0.348408;SGB=67.4678;VDB=0.975218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.2:2496646 chr02:002496646 0 W/2496646-2496646 FN2608-S SNP C -> A AC=1;AN=198;BQB=0.9746;DP=3924;DP4=1670,1985,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.96126e-06;MQSB=0.981826;RPB=0.143212;SGB=-5.00654;VDB=0.0966519;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.2:2500024 chr02:002500024 0 W/2500024-2500024 FN4271-S SNP T -> A AC=1;AN=170;BQB=0.95944;DP=2574;DP4=1116,1365,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0244755;MQB=0.0523643;MQSB=7.87251e-22;RPB=0.932193;SGB=30.1021;VDB=0.102965;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F268L|1531|LOC_Os02g05220|protein_coding|CODING|LOC_Os02g05220.1|2|1) FN4100-S.SNP.2:2504479 chr02:002504479 0 W/2504479-2504479 FN4100-S SNP G -> A AC=1;AN=182;BQB=0.361554;DP=4119;DP4=2347,1508,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0400583;MQB=0.817001;MQSB=0.88475;RPB=0.862521;SGB=57.644;VDB=0.0698041;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.2:2504480 chr02:002504480 0 W/2504480-2504480 FN4100-S SNP A -> T AC=1;AN=182;BQB=0.527279;DP=4126;DP4=2359,1482,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0395056;MQB=0.824538;MQSB=0.91035;RPB=0.94391;SGB=28.1658;VDB=0.115698;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.2:2513660 chr02:002513660 0 W/2513660-2513660 FN469-S Single Base Substitution T-C INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN698-S.SNP.2:2517330 chr02:002517330 0 W/2517330-2517330 FN698-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN4124-S.SNP.2:2519361 chr02:002519361 0 W/2519361-2519361 FN4124-S SNP G -> A AC=1;AN=182;BQB=0.935172;DP=2498;DP4=1370,1013,14,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.10246e-13;MQSB=0.897972;RPB=0.942387;SGB=-12.8015;VDB=0.118982;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.2:2529916 chr02:002529916 0 W/2529916-2529916 FN4141-S SNP T -> C AC=1;AN=170;BQB=0.961821;DP=2562;DP4=1388,1067,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00156128;MQB=1.19821e-06;MQSB=0.810677;RPB=0.982357;SGB=17.4413;VDB=0.378858;EFF=INTRON(MODIFIER||||1331|LOC_Os02g05260|protein_coding|CODING|LOC_Os02g05260.1|4|1) FN3994-S.SNP.2:2531208 chr02:002531208 0 W/2531208-2531208 FN3994-S SNP T -> G AC=1;AN=168;BQB=0.999947;DP=2633;DP4=997,1488,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23703e-05;MQSB=0.488795;RPB=0.845548;SGB=43.3113;VDB=0.222794;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acC|T313|1331|LOC_Os02g05260|protein_coding|CODING|LOC_Os02g05260.1|3|1) FN2235-S.SNP.2:2533960 chr02:002533960 0 W/2533960-2533960 FN2235-S SNP T -> C AC=2;AN=190;BQB=0.856902;DP=3724;DP4=1964,1487,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.07668e-10;MQSB=0.996499;RPB=0.954826;SGB=68.0854;VDB=0.276689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.2:2534692 chr02:002534692 0 W/2534692-2534692 FN2107-S SNP G -> A AC=2;AN=168;BQB=0.0412371;DP=3649;DP4=2113,1473,30,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.0067e-15;MQSB=0.996909;RPB=0.493272;SGB=-507.558;VDB=0.311493;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.2:2545523 chr02:002545523 0 W/2545523-2545523 FN885-S Single Base Substitution G-A INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN858-S.SNP.2:2548909 chr02:002548909 0 W/2548909-2548909 FN858-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3439-S.SNP.2:2554045 chr02:002554045 0 W/2554045-2554045 FN3439-S SNP G -> A AC=1;AN=184;BQB=0.751543;DP=2678;DP4=1239,1353,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0575056;MQB=0.0416471;MQSB=0.000356478;RPB=0.469559;SGB=-2.32838;VDB=0.237402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A272T|509|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A54T|350|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A54T|337|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.3|6|1),UTR_5_PRIME(MODIFIER||301||188|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.5|3|1) FN3439-S.SNP.2:2554065 chr02:002554065 0 W/2554065-2554065 FN3439-S SNP G -> C AC=1;AN=184;BQB=0.635678;DP=2719;DP4=1260,1397,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0514895;MQB=0.265631;MQSB=7.1602e-06;RPB=0.801208;SGB=13.188;VDB=0.950586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E278D|509|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E60D|350|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E60D|337|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.3|6|1),UTR_5_PRIME(MODIFIER||281||188|LOC_Os02g05320|protein_coding|CODING|LOC_Os02g05320.5|3|1) FN866-S.SNP.2:2555455 chr02:002555455 0 W/2555455-2555455 FN866-S Single Base Substitution G-T INTRON HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN2645-S.SNP.2:2557273 chr02:002557273 0 W/2557273-2557273 FN2645-S SNP A -> T AC=1;AN=200;BQB=0.982693;DP=5253;DP4=2336,2712,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6076e-18;MQSB=0.894394;RPB=0.535489;SGB=97.9523;VDB=0.408882;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.2:2561566 chr02:002561566 0 W/2561566-2561566 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2581-S.SNP.2:2572159 chr02:002572159 0 W/2572159-2572159 FN2581-S SNP G -> T AC=1;AN=198;BQB=0.952432;DP=4486;DP4=2269,1967,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26653e-06;MQSB=0.0388334;RPB=0.472107;SGB=-1.81641;VDB=0.232475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.2:2576372 chr02:002576372 0 W/2576372-2576372 FN2665-S SNP C -> A AC=2;AN=200;BQB=0.600264;DP=5159;DP4=2325,2454,17,20;HOB=0.0198;ICB=0.495051;MQ=24;MQ0F=0.37798;MQB=0.462439;MQSB=0;RPB=0.876144;SGB=123.188;VDB=0.74988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G201C|370|LOC_Os02g05360|protein_coding|CODING|LOC_Os02g05360.1|1|1) FN-80.SNP.2:2581346 chr02:002581346 0 W/2581346-2581346 FN-80 Single Base Substitution A-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN-80.SNP.2:2581347 chr02:002581347 0 W/2581347-2581347 FN-80 Single Base Substitution G-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN2279-S.SNP.2:2585902 chr02:002585902 0 W/2585902-2585902 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.203653;DP=4418;DP4=2216,1957,26,27;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0138072;MQB=6.50323e-16;MQSB=0.997326;RPB=0.874711;SGB=178.256;VDB=0.0617855;EFF=UTR_3_PRIME(MODIFIER||417||259|LOC_Os02g05370|protein_coding|CODING|LOC_Os02g05370.1|9|1),UTR_3_PRIME(MODIFIER||316||257|LOC_Os02g05370|protein_coding|CODING|LOC_Os02g05370.2|10|1) FN2279-S.SNP.2:2585903 chr02:002585903 0 W/2585903-2585903 FN2279-S SNP G -> T AC=2;AN=190;BQB=0.388712;DP=4428;DP4=2234,1943,24,26;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.013776;MQB=2.22671e-15;MQSB=0.632684;RPB=0.999813;SGB=113.045;VDB=0.142814;EFF=UTR_3_PRIME(MODIFIER||418||259|LOC_Os02g05370|protein_coding|CODING|LOC_Os02g05370.1|9|1),UTR_3_PRIME(MODIFIER||317||257|LOC_Os02g05370|protein_coding|CODING|LOC_Os02g05370.2|10|1) FN3345-S.SNP.2:2586813 chr02:002586813 0 W/2586813-2586813 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.845728;DP=3646;DP4=1789,1764,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00603401;MQB=0.00114828;MQSB=0.0979161;RPB=0.742545;SGB=35.7479;VDB=0.608027;EFF=INTERGENIC(MODIFIER||||||||||1) FN998-S.SNP.2:2593321 chr02:002593321 0 W/2593321-2593321 FN998-S Single Base Substitution T-A INTERGENIC HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN4155-S.SNP.2:2596440 chr02:002596440 0 W/2596440-2596440 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.958086;DP=2765;DP4=1252,1451,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0462929;MQB=0.000155315;MQSB=0.0059752;RPB=0.811876;SGB=43.4296;VDB=0.619274;EFF=START_GAINED(LOW||||317|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.2|4|1),START_GAINED(LOW||||391|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.1|4|1),UTR_5_PRIME(MODIFIER||132||317|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.2|4|1),UTR_5_PRIME(MODIFIER||7||391|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.1|4|1) FN4155-S.SNP.2:2596441 chr02:002596441 0 W/2596441-2596441 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.956764;DP=2761;DP4=1252,1434,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0459978;MQB=0.00030363;MQSB=0.00276686;RPB=0.919824;SGB=38.987;VDB=0.656326;EFF=UTR_5_PRIME(MODIFIER||133||317|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.2|4|1),UTR_5_PRIME(MODIFIER||8||391|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.1|4|1) FN4155-S.SNP.2:2596442 chr02:002596442 0 W/2596442-2596442 FN4155-S SNP C -> A AC=1;AN=170;BQB=0.934464;DP=2749;DP4=1251,1416,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.044016;MQB=0.000584086;MQSB=0.00335074;RPB=0.996064;SGB=34.5445;VDB=0.635556;EFF=UTR_5_PRIME(MODIFIER||134||317|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.2|4|1),UTR_5_PRIME(MODIFIER||9||391|LOC_Os02g05400|protein_coding|CODING|LOC_Os02g05400.1|4|1) FN2197-S.SNP.2:2612464 chr02:002612464 0 W/2612464-2612464 FN2197-S SNP T -> C AC=2;AN=190;BQB=0.604609;DP=5041;DP4=2458,2202,19,9;HOB=0.020831;ICB=0.494793;MQ=23;MQ0F=0.347748;MQB=0.997963;MQSB=1.45337e-27;RPB=0.878684;SGB=24.3115;VDB=0.633959;EFF=UTR_3_PRIME(MODIFIER||411||371|LOC_Os02g05430|protein_coding|CODING|LOC_Os02g05430.1|1|1) FN1610-S.SNP.2:2622349 chr02:002622349 0 W/2622349-2622349 FN1610-S Single Base Substitution A-C INTRON HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1243-S.SNP.2:2630608 chr02:002630608 0 W/2630608-2630608 FN1243-S Single Base Substitution A-G INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2755-S.SNP.2:2634256 chr02:002634256 0 W/2634256-2634256 FN2755-S SNP G -> A AC=2;AN=200;BQB=0.523432;DP=5205;DP4=2448,2312,34,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.85555e-37;MQSB=0.880356;RPB=0.670895;SGB=154.533;VDB=0.360794;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.2:2634269 chr02:002634269 0 W/2634269-2634269 FN-175 Single Base Substitution T-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN989-S.SNP.2:2643871 chr02:002643871 0 W/2643871-2643871 FN989-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g05480 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN-119.SNP.2:2646661 chr02:002646661 0 W/2646661-2646661 FN-119 Single Base Substitution C-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3532-S.SNP.2:2647082 chr02:002647082 0 W/2647082-2647082 FN3532-S SNP C -> T AC=2;AN=188;BQB=0.902281;DP=2742;DP4=1257,1400,19,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.68423e-19;MQSB=0.89203;RPB=0.693529;SGB=158.018;VDB=0.55499;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.2:2647442 chr02:002647442 0 W/2647442-2647442 FN483-S Single Base Substitution T-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1263-S.SNP.2:2653384 chr02:002653384 0 W/2653384-2653384 FN1263-S Single Base Substitution C-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1490-S.SNP.2:2654373 chr02:002654373 0 W/2654373-2654373 FN1490-S Single Base Substitution A-G INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2530-S.SNP.2:2667902 chr02:002667902 0 W/2667902-2667902 FN2530-S SNP A -> C AC=2;AN=198;BQB=0.684693;DP=4238;DP4=1930,2048,23,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.05957e-18;MQSB=0.70963;RPB=0.5378;SGB=83.8419;VDB=0.491211;EFF=UTR_3_PRIME(MODIFIER||94||328|LOC_Os02g05510|protein_coding|CODING|LOC_Os02g05510.1|7|1),UTR_3_PRIME(MODIFIER||94||304|LOC_Os02g05510|protein_coding|CODING|LOC_Os02g05510.3|6|1) FN2411.SNP.2:2675386 chr02:002675386 0 W/2675386-2675386 FN2411 SNP C -> G AC=1;AN=200;BQB=0.905736;DP=4890;DP4=2104,2456,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.15971e-13;MQSB=0.955005;RPB=0.812308;SGB=-38.0794;VDB=0.667145;EFF=INTRON(MODIFIER||||330|LOC_Os02g05530|protein_coding|CODING|LOC_Os02g05530.1|2|1) FN1669-S.SNP.2:2677785 chr02:002677785 0 W/2677785-2677785 FN1669-S SNP C -> T AC=2;AN=188;BQB=0.982534;DP=915;DP4=614,267,8,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.8499e-08;MQSB=0.775663;RPB=0.772538;SGB=53.5223;VDB=0.604715;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.2:2686209 chr02:002686209 0 W/2686209-2686209 FN-121 Single Base Substitution T-A INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN2638-S.SNP.2:2687064 chr02:002687064 0 W/2687064-2687064 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.753276;DP=4761;DP4=2520,1986,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91778e-10;MQSB=0.741029;RPB=0.387997;SGB=77.2904;VDB=0.0509526;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.2:2687387 chr02:002687387 0 W/2687387-2687387 W674-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN-306.SNP.2:2698904 chr02:002698904 0 W/2698904-2698904 FN-306 Single Base Substitution G-A INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2358.SNP.2:2701643 chr02:002701643 0 W/2701643-2701643 FN2358 SNP A -> G AC=2;AN=192;BQB=0.707194;DP=3145;DP4=1041,1870,7,12;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.156757;MQB=0.696106;MQSB=0;RPB=0.963914;SGB=57.6018;VDB=0.235649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.2:2712800 chr02:002712800 0 W/2712800-2712800 FN2081-S SNP C -> T AC=1;AN=168;BQB=0.315564;DP=3088;DP4=1777,1253,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.79314e-09;MQSB=0.983608;RPB=0.537776;SGB=-41.2125;VDB=0.64766;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L170|222|LOC_Os02g05590|protein_coding|CODING|LOC_Os02g05590.1|1|1) FN2229-S.SNP.2:2725768 chr02:002725768 0 W/2725768-2725768 FN2229-S SNP C -> A AC=2;AN=190;BQB=0.17123;DP=5020;DP4=2327,2271,32,47;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4013e-45;MQSB=0.9907;RPB=0.573496;SGB=304.616;VDB=0.354053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.2:2728058 chr02:002728058 0 W/2728058-2728058 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.128873;DP=4611;DP4=2241,1983,18,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15525e-14;MQSB=0.747586;RPB=0.999208;SGB=44.0907;VDB=0.842849;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.2:2728303 chr02:002728303 0 W/2728303-2728303 FN373-S Single Base Substitution T-G INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2784-S.SNP.2:2728742 chr02:002728742 0 W/2728742-2728742 FN2784-S SNP G -> A AC=2;AN=198;BQB=0.900199;DP=3744;DP4=1845,1671,25,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.80348e-23;MQSB=0.943862;RPB=0.54594;SGB=214.973;VDB=0.733577;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.2:2732553 chr02:002732553 0 W/2732553-2732553 FN1332-S Single Base Substitution A-G INTRON HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3760-S.SNP.2:2735536 chr02:002735536 0 W/2735536-2735536 FN3760-S SNP A -> T AC=1;AN=190;BQB=0.999576;DP=2500;DP4=1277,1162,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.26212e-07;MQSB=0.942645;RPB=0.857578;SGB=39.9877;VDB=0.748814;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.2:2735910 chr02:002735910 0 W/2735910-2735910 FN3760-S SNP T -> G AC=1;AN=190;BQB=0.988975;DP=2519;DP4=1157,1302,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01999e-07;MQSB=0.990741;RPB=0.599054;SGB=25.439;VDB=0.389245;EFF=UTR_3_PRIME(MODIFIER||453||664|LOC_Os02g05620|protein_coding|CODING|LOC_Os02g05620.1|1|1) FN3740-S.SNP.2:2747281 chr02:002747281 0 W/2747281-2747281 FN3740-S SNP C -> T AC=1;AN=190;BQB=0.997313;DP=3109;DP4=1395,1504,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.29942e-07;MQSB=0.965229;RPB=0.608344;SGB=25.439;VDB=0.380974;EFF=UTR_3_PRIME(MODIFIER||882||265|LOC_Os02g05630|protein_coding|CODING|LOC_Os02g05630.3|7|1),UTR_3_PRIME(MODIFIER||295||348|LOC_Os02g05630|protein_coding|CODING|LOC_Os02g05630.1|8|1),UTR_3_PRIME(MODIFIER||295||280|LOC_Os02g05630|protein_coding|CODING|LOC_Os02g05630.4|7|1),UTR_3_PRIME(MODIFIER||295||254|LOC_Os02g05630|protein_coding|CODING|LOC_Os02g05630.2|8|1) FN3832-S.SNP.2:2749712 chr02:002749712 0 W/2749712-2749712 FN3832-S SNP C -> A AC=2;AN=190;BQB=0.690886;DP=3815;DP4=1909,1500,29,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.45401e-24;MQSB=0.947286;RPB=0.771744;SGB=-108.041;VDB=0.448956;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.2:2754197 chr02:002754197 0 W/2754197-2754197 FN1273-S Single Base Substitution C-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1184-S.SNP.2:2759122 chr02:002759122 0 W/2759122-2759122 FN1184-S Single Base Substitution T-C INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3356-S.SNP.2:2764095 chr02:002764095 0 W/2764095-2764095 FN3356-S SNP A -> T AC=2;AN=184;BQB=0.321958;DP=2970;DP4=1376,1470,13,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.32398e-07;MQSB=0.732508;RPB=0.625308;SGB=84.9167;VDB=0.345226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-333.SNP.2:2764867 chr02:002764867 0 W/2764867-2764867 FN-333 Single Base Substitution A-T INTERGENIC HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN2281.SNP.2:2764867 chr02:002764867 0 W/2764867-2764867 FN2281 SNP A -> T AC=2;AN=192;BQB=0.937702;DP=4805;DP4=2111,2378,20,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.7198e-22;MQSB=0.91876;RPB=0.982647;SGB=132.453;VDB=0.337105;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.2:2771198 chr02:002771198 0 W/2771198-2771198 W466-5-1 Single Base Substitution T-C INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2739-S.SNP.2:2781100 chr02:002781100 0 W/2781100-2781100 FN2739-S SNP C -> A AC=1;AN=200;BQB=0.90777;DP=4121;DP4=2040,1823,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9341e-07;MQSB=0.947782;RPB=0.914742;SGB=54.2646;VDB=0.957095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.2:2784251 chr02:002784251 0 W/2784251-2784251 FN2329 SNP A -> C AC=1;AN=192;BQB=0.880782;DP=4994;DP4=2344,2298,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00020024;MQB=9.36576e-11;MQSB=0.983354;RPB=0.958753;SGB=57.6018;VDB=0.513774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.2:2790604 chr02:002790604 0 W/2790604-2790604 FN3860-S SNP G -> A AC=1;AN=158;BQB=0.979103;DP=2353;DP4=1098,1160,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000424989;MQB=3.16869e-08;MQSB=0.858634;RPB=0.996515;SGB=16.7104;VDB=0.900017;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN-288 Single Base Substitution C-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-341.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN-341 Single Base Substitution C-T INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1561-S.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN1561-S Single Base Substitution C-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN437-S.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN437-S Single Base Substitution C-T INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN692-S.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN692-S Single Base Substitution C-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN707-S.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN707-S Single Base Substitution C-T INTERGENIC HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN_822-5-1.SNP.2:2791140 chr02:002791140 0 W/2791140-2791140 FN_822-5-1 Single Base Substitution C-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3731-S.SNP.2:2794521 chr02:002794521 0 W/2794521-2794521 FN3731-S SNP T -> A AC=1;AN=190;BQB=0.316405;DP=2755;DP4=1372,1297,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26688e-05;MQSB=0.981909;RPB=0.682009;SGB=62.7569;VDB=0.95178;EFF=INTRON(MODIFIER||||529|LOC_Os02g05692|protein_coding|CODING|LOC_Os02g05692.2|4|1),INTRON(MODIFIER||||580|LOC_Os02g05692|protein_coding|CODING|LOC_Os02g05692.1|5|1) FN2112-S.SNP.2:2800562 chr02:002800562 0 W/2800562-2800562 FN2112-S SNP T -> C AC=1;AN=168;BQB=0.254161;DP=3808;DP4=1782,1997,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.8125e-06;MQSB=0.970158;RPB=0.529067;SGB=-15.8033;VDB=0.109184;EFF=INTRON(MODIFIER||||623|LOC_Os02g05700|protein_coding|CODING|LOC_Os02g05700.1|1|1),INTRON(MODIFIER||||623|LOC_Os02g05700|protein_coding|CODING|LOC_Os02g05700.2|1|1) FN3444-S.SNP.2:2805722 chr02:002805722 0 W/2805722-2805722 FN3444-S SNP G -> C AC=1;AN=184;BQB=0.944616;DP=2759;DP4=1393,1301,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61046e-08;MQSB=0.914339;RPB=0.985589;SGB=53.2642;VDB=0.0787493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D104E|320|LOC_Os02g05710|protein_coding|CODING|LOC_Os02g05710.1|2|1) FN1492-S.SNP.2:2806361 chr02:002806361 0 W/2806361-2806361 FN1492-S Single Base Substitution G-A INTRON HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2162-S.SNP.2:2816030 chr02:002816030 0 W/2816030-2816030 FN2162-S SNP G -> A AC=2;AN=168;BQB=9.48853e-05;DP=3713;DP4=1972,1666,21,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.27304e-22;MQSB=0.985164;RPB=0.954577;SGB=-172.568;VDB=0.277045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G920E|973|LOC_Os02g05720|protein_coding|CODING|LOC_Os02g05720.1|2|1) FN1759-S.SNP.2:2827735 chr02:002827735 0 W/2827735-2827735 FN1759-S SNP C -> T AC=1;AN=188;BQB=0.0152685;DP=3693;DP4=1866,1773,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.12362e-09;MQSB=0.99465;RPB=0.333545;SGB=-101.181;VDB=0.118142;EFF=INTRON(MODIFIER||||534|LOC_Os02g05744|protein_coding|CODING|LOC_Os02g05744.1|4|1) FN4082-S.SNP.2:2829056 chr02:002829056 0 W/2829056-2829056 FN4082-S SNP C -> G AC=1;AN=182;BQB=0.999192;DP=2820;DP4=1099,1613,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14951e-10;MQSB=0.902432;RPB=0.872616;SGB=75.6874;VDB=0.00689906;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acC|T159|534|LOC_Os02g05744|protein_coding|CODING|LOC_Os02g05744.1|3|1) FN3942-S.SNP.2:2834088 chr02:002834088 0 W/2834088-2834088 FN3942-S SNP T -> A AC=2;AN=168;BQB=0.849505;DP=2737;DP4=1489,1128,17,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.25658e-15;MQSB=0.816194;RPB=0.998971;SGB=-9.7719;VDB=0.989849;EFF=INTRON(MODIFIER||||145|LOC_Os02g05760|protein_coding|CODING|LOC_Os02g05760.1|2|1) FN-150.SNP.2:2837182 chr02:002837182 0 W/2837182-2837182 FN-150 Single Base Substitution A-T INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2388.SNP.2:2837958 chr02:002837958 0 W/2837958-2837958 FN2388 SNP A -> T AC=1;AN=200;BQB=0.984882;DP=3888;DP4=1650,1851,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.98572e-15;MQSB=0.124731;RPB=0.757637;SGB=-5.84819;VDB=0.00150412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.2:2849594 chr02:002849594 0 W/2849594-2849594 FN1441-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1751-S.SNP.2:2851226 chr02:002851226 0 W/2851226-2851226 FN1751-S SNP A -> C AC=2;AN=188;BQB=0.529464;DP=3447;DP4=1620,1778,13,19;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.000580215;MQB=1.1776e-09;MQSB=2.6281e-15;RPB=0.923831;SGB=30.2309;VDB=0.182137;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.2:2851227 chr02:002851227 0 W/2851227-2851227 FN1751-S SNP C -> A AC=2;AN=188;BQB=0.375146;DP=3458;DP4=1630,1775,11,23;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.000578369;MQB=1.67616e-07;MQSB=3.87577e-15;RPB=0.747653;SGB=-43.7584;VDB=0.0558397;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.2:2855123 chr02:002855123 0 W/2855123-2855123 FN1009-S Single Base Substitution T-C INTERGENIC HOMO SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2579-S.SNP.2:2856053 chr02:002856053 0 W/2856053-2856053 FN2579-S SNP A -> T AC=1;AN=198;BQB=0.737926;DP=3996;DP4=1849,1926,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0850851;MQB=0.577255;MQSB=0;RPB=0.620611;SGB=23.7055;VDB=0.0705052;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.2:2862484 chr02:002862484 0 W/2862484-2862484 FN4181-S SNP A -> G AC=1;AN=170;BQB=0.957675;DP=2290;DP4=1323,838,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00131004;MQB=7.69182e-05;MQSB=0.108404;RPB=0.344297;SGB=30.1021;VDB=0.0450942;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.2:2864438 chr02:002864438 0 W/2864438-2864438 FN-350 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-350.SNP.2:2864550 chr02:002864550 0 W/2864550-2864550 FN-350 Single Base Substitution G-A INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-350.SNP.2:2864551 chr02:002864551 0 W/2864551-2864551 FN-350 Single Base Substitution G-A INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-350.SNP.2:2864552 chr02:002864552 0 W/2864552-2864552 FN-350 Single Base Substitution T-A INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN796-S.SNP.2:2867217 chr02:002867217 0 W/2867217-2867217 FN796-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2444.SNP.2:2881761 chr02:002881761 0 W/2881761-2881761 FN2444 SNP C -> A AC=1;AN=200;BQB=0.533645;DP=2010;DP4=672,901,7,8;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.000995025;MQB=0.00727598;MQSB=1.28084e-06;RPB=0.410581;SGB=-14.9257;VDB=0.656764;EFF=INTRON(MODIFIER||||749|LOC_Os02g05840|protein_coding|CODING|LOC_Os02g05840.1|1|1) FN1068-S.SNP.2:2890205 chr02:002890205 0 W/2890205-2890205 FN1068-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g05850 transposon protein, putative, unclassified, expressed SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2666-S.SNP.2:2890681 chr02:002890681 0 W/2890681-2890681 FN2666-S SNP G -> T AC=2;AN=200;BQB=0.438209;DP=4549;DP4=2153,2037,32,33;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0510002;MQB=0.193502;MQSB=0.0656137;RPB=0.723046;SGB=176.856;VDB=0.591304;EFF=INTRON(MODIFIER||||1344|LOC_Os02g05850|protein_coding|CODING|LOC_Os02g05850.1|4|1) FN-90.SNP.2:2892188 chr02:002892188 0 W/2892188-2892188 FN-90 Single Base Substitution G-A INTERGENIC HOMO SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1482-S.SNP.2:2904505 chr02:002904505 0 W/2904505-2904505 FN1482-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN4107-S.SNP.2:2908215 chr02:002908215 0 W/2908215-2908215 FN4107-S SNP A -> C AC=1;AN=182;BQB=0.906671;DP=2959;DP4=1432,1417,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.07785e-07;MQSB=0.996122;RPB=0.21228;SGB=44.1115;VDB=0.197389;EFF=INTRON(MODIFIER||||2017|LOC_Os02g05880|protein_coding|CODING|LOC_Os02g05880.1|15|1) FN-342.SNP.2:2924630 chr02:002924630 0 W/2924630-2924630 FN-342 Single Base Substitution G-A INTRON HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN_826-4-1.SNP.2:2924658 chr02:002924658 0 W/2924658-2924658 FN_826-4-1 Single Base Substitution G-A Homo LOC_Os02g05890 EMB1303, putative, expressed SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN4260-S.SNP.2:2935455 chr02:002935455 0 W/2935455-2935455 FN4260-S SNP T -> C AC=1;AN=170;BQB=0.983052;DP=2631;DP4=1313,1234,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.58097e-10;MQSB=0.906093;RPB=0.988011;SGB=70.0854;VDB=0.73794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I593V|1051|LOC_Os02g05910|protein_coding|CODING|LOC_Os02g05910.1|1|1) FN1515-S.SNP.2:2943152 chr02:002943152 0 W/2943152-2943152 FN1515-S Single Base Substitution G-A INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2599-S.SNP.2:2951075 chr02:002951075 0 W/2951075-2951075 FN2599-S SNP G -> C AC=1;AN=198;BQB=0.119428;DP=3584;DP4=1779,1596,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47169e-08;MQSB=0.9947;RPB=0.757901;SGB=50.9344;VDB=0.0854503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.2:2962270 chr02:002962270 0 W/2962270-2962270 FN3721-S SNP T -> G AC=1;AN=190;BQB=0.88866;DP=2812;DP4=1375,1250,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2289e-11;MQSB=0.953737;RPB=0.443688;SGB=68.0854;VDB=0.127208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.2:2970563 chr02:002970563 0 W/2970563-2970563 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.536937;DP=2668;DP4=1531,985,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.17415e-07;MQSB=0.996966;RPB=0.920438;SGB=73.2838;VDB=0.982645;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.2:2972061 chr02:002972061 0 W/2972061-2972061 FN4126-S SNP C -> A AC=1;AN=182;BQB=0.507252;DP=3371;DP4=1550,1753,10,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.34194e-10;MQSB=0.935637;RPB=0.107817;SGB=84.7091;VDB=0.268937;EFF=UTR_3_PRIME(MODIFIER||181||1046|LOC_Os02g05970|protein_coding|CODING|LOC_Os02g05970.1|1|1) FN2428.SNP.2:2973488 chr02:002973488 0 W/2973488-2973488 FN2428 SNP A -> G AC=1;AN=200;BQB=0.992676;DP=4893;DP4=2341,2234,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56873e-08;MQSB=0.949519;RPB=0.704257;SGB=49.6594;VDB=0.76076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F632S|1046|LOC_Os02g05970|protein_coding|CODING|LOC_Os02g05970.1|1|1) FN3766-S.SNP.2:2984327 chr02:002984327 0 W/2984327-2984327 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.83903;DP=3602;DP4=1742,1709,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19428e-11;MQSB=0.981767;RPB=0.923272;SGB=76.4186;VDB=0.129778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.2:2989009 chr02:002989009 0 W/2989009-2989009 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.743786;DP=5180;DP4=2869,2052,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0395753;MQB=0.317797;MQSB=0;RPB=0.842974;SGB=65.3149;VDB=0.828623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P582L|640|LOC_Os02g05990|protein_coding|CODING|LOC_Os02g05990.1|9|1) FN3358-S.SNP.2:2989762 chr02:002989762 0 W/2989762-2989762 FN3358-S SNP T -> A AC=1;AN=184;BQB=0.974603;DP=4202;DP4=1810,2233,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0111851;MQB=0.000186215;MQSB=2.51043e-23;RPB=0.371829;SGB=60.4004;VDB=0.145066;EFF=INTRON(MODIFIER||||640|LOC_Os02g05990|protein_coding|CODING|LOC_Os02g05990.1|5|1) FN1330-S.SNP.2:3010817 chr02:003010817 0 W/3010817-3010817 FN1330-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN551-S.SNP.2:3012930 chr02:003012930 0 W/3012930-3012930 FN551-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g06040 retrotransposon protein, putative, unclassified, expressed SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN520-S.SNP.2:3013494 chr02:003013494 0 W/3013494-3013494 FN520-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g06040 retrotransposon protein, putative, unclassified, expressed SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3445-S.SNP.2:3020268 chr02:003020268 0 W/3020268-3020268 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.942484;DP=9324;DP4=2473,6678,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0222008;MQB=0.469903;MQSB=0;RPB=0.498296;SGB=35.884;VDB=0.16818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G172R|2027|LOC_Os02g06050|protein_coding|CODING|LOC_Os02g06050.1|1|1) FN2707-S.SNP.2:3021181 chr02:003021181 0 W/3021181-3021181 FN2707-S SNP A -> T AC=1;AN=200;BQB=0.915526;DP=4825;DP4=2341,2137,9,5;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.146736;MQB=0.0741179;MQSB=3.28029e-31;RPB=0.937961;SGB=40.2696;VDB=0.12752;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.2:3032155 chr02:003032155 0 W/3032155-3032155 FN851-S Single Base Substitution G-A INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN-332.SNP.2:3032719 chr02:003032719 0 W/3032719-3032719 FN-332 Single Base Substitution G-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-192.SNP.2:3035882 chr02:003035882 0 W/3035882-3035882 FN-192 Single Base Substitution A-T INTRON HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN3493-S.SNP.2:3036117 chr02:003036117 0 W/3036117-3036117 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.994591;DP=3358;DP4=1873,1391,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94515e-08;MQSB=0.987095;RPB=0.989638;SGB=62.3078;VDB=0.539953;EFF=INTRON(MODIFIER||||166|LOC_Os02g06080|protein_coding|CODING|LOC_Os02g06080.1|1|1) FN3906-S.SNP.2:3045140 chr02:003045140 0 W/3045140-3045140 FN3906-S SNP C -> T AC=1;AN=158;BQB=0.6918;DP=2556;DP4=1349,1121,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000174216;MQSB=0.82499;RPB=0.993701;SGB=42.6978;VDB=0.804222;EFF=INTRON(MODIFIER||||986|LOC_Os02g06110|protein_coding|CODING|LOC_Os02g06110.1|1|1) FN1000-S.SNP.2:3056583 chr02:003056583 0 W/3056583-3056583 FN1000-S Single Base Substitution C-T INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN900-S.SNP.2:3056656 chr02:003056656 0 W/3056656-3056656 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN410-S.SNP.2:3057258 chr02:003057258 0 W/3057258-3057258 FN410-S Single Base Substitution A-G INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2123-S.SNP.2:3059468 chr02:003059468 0 W/3059468-3059468 FN2123-S SNP T -> C AC=2;AN=168;BQB=0.268431;DP=3591;DP4=1729,1778,31,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.33631e-32;MQSB=0.980767;RPB=0.157096;SGB=166.402;VDB=0.93894;EFF=UTR_3_PRIME(MODIFIER||109||670|LOC_Os02g06130|protein_coding|CODING|LOC_Os02g06130.1|4|1) FN1106-S.SNP.2:3072007 chr02:003072007 0 W/3072007-3072007 FN1106-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g06150 brassinosteroid LRR receptor kinase precursor, putative, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN981-S.SNP.2:3080203 chr02:003080203 0 W/3080203-3080203 FN981-S Single Base Substitution A-T INTERGENIC HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3380-S.SNP.2:3090723 chr02:003090723 0 W/3090723-3090723 FN3380-S SNP T -> A AC=1;AN=184;BQB=0.98533;DP=2936;DP4=1533,1299,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0688011;MQB=0.701435;MQSB=6.0349e-07;RPB=0.94503;SGB=32.2261;VDB=0.885039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.2:3100370 chr02:003100370 0 W/3100370-3100370 FN1003-S Single Base Substitution C-T INTERGENIC HOMO SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN-97.SNP.2:3112958 chr02:003112958 0 W/3112958-3112958 FN-97 Single Base Substitution G-T INTERGENIC HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1636-S.SNP.2:3122929 chr02:003122929 0 W/3122929-3122929 FN1636-S Single Base Substitution G-C INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN3293-S.SNP.2:3126271 chr02:003126271 0 W/3126271-3126271 FN3293-S SNP G -> A AC=1;AN=184;BQB=0.949822;DP=3193;DP4=1737,1370,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.0152e-10;MQSB=0.928816;RPB=0.872101;SGB=62.3078;VDB=0.333627;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S100L|636|LOC_Os02g06250|protein_coding|CODING|LOC_Os02g06250.1|1|1) FN929-S.SNP.2:3130222 chr02:003130222 0 W/3130222-3130222 FN929-S Single Base Substitution C-A INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN-359.SNP.2:3136244 chr02:003136244 0 W/3136244-3136244 FN-359 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g06280 receptor-like protein kinase 2 precursor, putative, expressed SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN2774-S.SNP.2:3138527 chr02:003138527 0 W/3138527-3138527 FN2774-S SNP A -> C AC=1;AN=198;BQB=0.969292;DP=4044;DP4=1969,1884,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.3469e-09;MQSB=0.825951;RPB=0.327526;SGB=31.9395;VDB=0.021209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.2:3156526 chr02:003156526 0 W/3156526-3156526 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.831741;DP=2972;DP4=1501,1308,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.32482e-06;MQSB=0.958836;RPB=0.985447;SGB=28.9929;VDB=0.421703;EFF=INTRON(MODIFIER||||445|LOC_Os02g06310|protein_coding|CODING|LOC_Os02g06310.1|4|1) FN3947-S.SNP.2:3161319 chr02:003161319 0 W/3161319-3161319 FN3947-S SNP G -> T AC=1;AN=168;BQB=0.963307;DP=2298;DP4=1142,1070,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50636e-10;MQSB=0.952933;RPB=0.986382;SGB=31.908;VDB=0.819407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.2:3166275 chr02:003166275 0 W/3166275-3166275 FN2480 SNP C -> T AC=1;AN=200;BQB=0.962498;DP=5101;DP4=2473,2173,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.97938e-08;MQSB=0.51027;RPB=0.745677;SGB=6.27959;VDB=0.317973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.2:3167463 chr02:003167463 0 W/3167463-3167463 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.762705;DP=5083;DP4=2290,2595,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.75165e-11;MQSB=0.992809;RPB=0.976035;SGB=51.0851;VDB=0.753379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N395I|543|LOC_Os02g06340|protein_coding|CODING|LOC_Os02g06340.1|14|1) FN-93.SNP.2:3181911 chr02:003181911 0 W/3181911-3181911 FN-93 Single Base Substitution G-A INTRON HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN594-S.SNP.2:3196493 chr02:003196493 0 W/3196493-3196493 FN594-S Single Base Substitution G-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1119-S.SNP.2:3197226 chr02:003197226 0 W/3197226-3197226 FN1119-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2091-S.SNP.2:3198292 chr02:003198292 0 W/3198292-3198292 FN2091-S SNP G -> T AC=1;AN=168;BQB=0.908627;DP=4158;DP4=2035,2075,13,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.7735e-19;MQSB=0.712353;RPB=0.915965;SGB=103.364;VDB=0.86733;EFF=INTRON(MODIFIER||||573|LOC_Os02g06400|protein_coding|CODING|LOC_Os02g06400.1|3|1) FN3944-S.SNP.2:3200896 chr02:003200896 0 W/3200896-3200896 FN3944-S SNP T -> A AC=2;AN=168;BQB=0.865057;DP=2620;DP4=1266,1243,17,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.52911e-18;MQSB=0.660493;RPB=0.65022;SGB=118.635;VDB=0.143519;EFF=INTRON(MODIFIER||||573|LOC_Os02g06400|protein_coding|CODING|LOC_Os02g06400.1|6|1) FN3944-S.SNP.2:3200910 chr02:003200910 0 W/3200910-3200910 FN3944-S SNP T -> A AC=2;AN=168;BQB=0.844647;DP=2623;DP4=1197,1249,15,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.32721e-16;MQSB=0.826482;RPB=0.580711;SGB=118.635;VDB=0.632328;EFF=INTRON(MODIFIER||||573|LOC_Os02g06400|protein_coding|CODING|LOC_Os02g06400.1|6|1) FN4311-S.SNP.2:3207211 chr02:003207211 0 W/3207211-3207211 FN4311-S SNP G -> T AC=1;AN=170;BQB=0.99971;DP=2188;DP4=962,1124,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.01715e-07;MQSB=0.782939;RPB=0.392829;SGB=17.4413;VDB=0.921272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.2:3213027 chr02:003213027 0 W/3213027-3213027 FN2290 SNP G -> A AC=1;AN=192;BQB=0.842968;DP=4914;DP4=2235,2304,22,30;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14944e-25;MQSB=0.776093;RPB=0.916448;SGB=-220.689;VDB=0.57186;EFF=INTRON(MODIFIER||||675|LOC_Os02g06430|protein_coding|CODING|LOC_Os02g06430.1|1|1) FN2440.SNP.2:3214623 chr02:003214623 0 W/3214623-3214623 FN2440 SNP T -> C AC=1;AN=200;BQB=0.994386;DP=5060;DP4=2255,2521,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10294e-16;MQSB=0.914379;RPB=0.999963;SGB=58.1418;VDB=0.813848;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F151|675|LOC_Os02g06430|protein_coding|CODING|LOC_Os02g06430.1|5|1) FN4302-S.SNP.2:3221703 chr02:003221703 0 W/3221703-3221703 FN4302-S SNP T -> C AC=1;AN=170;BQB=0.998242;DP=2523;DP4=1144,1252,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.77624e-08;MQSB=0.999993;RPB=0.749602;SGB=19.8839;VDB=0.82338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I490V|624|LOC_Os02g06460|protein_coding|CODING|LOC_Os02g06460.1|9|1) FN2535-S.SNP.2:3239853 chr02:003239853 0 W/3239853-3239853 FN2535-S SNP G -> T AC=1;AN=198;BQB=0.377763;DP=4077;DP4=1937,1906,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.87627e-11;MQSB=0.946694;RPB=0.531957;SGB=60.4858;VDB=0.61473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Agt|R416S|773|LOC_Os02g06500|protein_coding|CODING|LOC_Os02g06500.1|19|1) W706-3-1.SNP.2:3241371 chr02:003241371 0 W/3241371-3241371 W706-3-1 Single Base Substitution C-T INTRON HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN4183-S.SNP.2:3247305 chr02:003247305 0 W/3247305-3247305 FN4183-S SNP T -> C AC=1;AN=170;BQB=0.859085;DP=2648;DP4=1396,1212,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.13387e-06;MQSB=0.977181;RPB=0.999989;SGB=31.4354;VDB=0.223642;EFF=INTRON(MODIFIER||||773|LOC_Os02g06500|protein_coding|CODING|LOC_Os02g06500.1|7|1) FN2192-S.SNP.2:3252926 chr02:003252926 0 W/3252926-3252926 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.484392;DP=4815;DP4=2243,2118,8,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.98425e-14;MQSB=0.892776;RPB=0.374427;SGB=85.8548;VDB=0.478891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.2:3254118 chr02:003254118 0 W/3254118-3254118 FN2296 SNP A -> G AC=1;AN=192;BQB=0.781509;DP=4855;DP4=2117,2356,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.01382e-13;MQSB=0.0192674;RPB=0.79568;SGB=117.676;VDB=0.462221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.2:3260165 chr02:003260165 0 W/3260165-3260165 FN1718-S SNP A -> G AC=1;AN=188;BQB=0.12694;DP=4328;DP4=2307,1981,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07786e-08;MQSB=0.940552;RPB=0.942582;SGB=-38.278;VDB=0.0701203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.2:3293379 chr02:003293379 0 W/3293379-3293379 FN2297 SNP T -> C AC=1;AN=192;BQB=0.648365;DP=5007;DP4=2556,2205,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.05393e-09;MQSB=0.898923;RPB=0.961186;SGB=8.91915;VDB=0.963096;EFF=INTRON(MODIFIER||||881|LOC_Os02g06580|protein_coding|CODING|LOC_Os02g06580.1|3|1) FN2655-S.SNP.2:3298601 chr02:003298601 0 W/3298601-3298601 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.425938;DP=4956;DP4=2299,2408,11,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=5.35515e-10;MQSB=0.0782193;RPB=0.758302;SGB=69.1109;VDB=0.0802536;EFF=INTRON(MODIFIER||||426|LOC_Os02g06584|protein_coding|CODING|LOC_Os02g06584.2|1|1),INTRON(MODIFIER||||308|LOC_Os02g06584|protein_coding|CODING|LOC_Os02g06584.3|1|1),INTRON(MODIFIER||||295|LOC_Os02g06584|protein_coding|CODING|LOC_Os02g06584.4|1|1) FN759-S.SNP.2:3311360 chr02:003311360 0 W/3311360-3311360 FN759-S Single Base Substitution C-G INTERGENIC HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN406-S.SNP.2:3312474 chr02:003312474 0 W/3312474-3312474 FN406-S Single Base Substitution G-A INTRON HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN1196-S.SNP.2:3314151 chr02:003314151 0 W/3314151-3314151 FN1196-S Single Base Substitution T-G INTRON HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN2426.SNP.2:3314322 chr02:003314322 0 W/3314322-3314322 FN2426 SNP A -> G AC=1;AN=200;BQB=0.692055;DP=4655;DP4=2085,2239,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.73005e-11;MQSB=0.995643;RPB=0.545902;SGB=72.6852;VDB=0.28543;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N24D|563|LOC_Os02g06592|protein_coding|CODING|LOC_Os02g06592.1|2|1) W481-5-1.SNP.2:3315866 chr02:003315866 0 W/3315866-3315866 W481-5-1 Single Base Substitution G-T INTRON HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W481-5-1.SNP.2:3315869 chr02:003315869 0 W/3315869-3315869 W481-5-1 Single Base Substitution G-T INTRON HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2473.SNP.2:3316709 chr02:003316709 0 W/3316709-3316709 FN2473 SNP T -> A AC=2;AN=200;BQB=0.992261;DP=5280;DP4=2221,2630,17,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.69385e-16;MQSB=0.943566;RPB=0.997839;SGB=73.7728;VDB=0.23225;EFF=INTRON(MODIFIER||||563|LOC_Os02g06592|protein_coding|CODING|LOC_Os02g06592.1|7|1) FN1689-S.SNP.2:3317437 chr02:003317437 0 W/3317437-3317437 FN1689-S SNP A -> C AC=1;AN=188;BQB=0.0010524;DP=3905;DP4=1671,2186,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.28403e-05;MQSB=0.941721;RPB=0.548264;SGB=-135.516;VDB=0.784403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aCc|N430T|563|LOC_Os02g06592|protein_coding|CODING|LOC_Os02g06592.1|9|1) FN-231.SNP.2:3320695 chr02:003320695 0 W/3320695-3320695 FN-231 Single Base Substitution C-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2690-S.SNP.2:3320695 chr02:003320695 0 W/3320695-3320695 FN2690-S SNP C -> A AC=2;AN=200;BQB=0.977574;DP=4947;DP4=2389,2181,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.6098e-20;MQSB=0.99997;RPB=0.39986;SGB=94.6142;VDB=0.533908;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.2:3320695 chr02:003320695 0 W/3320695-3320695 FN3484-S SNP C -> A AC=1;AN=184;BQB=0.987398;DP=2824;DP4=1548,1165,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.03038e-09;MQSB=0.848012;RPB=0.892623;SGB=23.2751;VDB=0.794355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.2:3320710 chr02:003320710 0 W/3320710-3320710 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.9683;DP=5110;DP4=2599,2224,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53014e-15;MQSB=0.97465;RPB=0.646347;SGB=-6.45336;VDB=0.374118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.2:3322960 chr02:003322960 0 W/3322960-3322960 FN2721-S SNP A -> G AC=1;AN=200;BQB=0.222106;DP=4621;DP4=1916,2541,7,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00101379;MQSB=0.756902;RPB=0.559236;SGB=34.6953;VDB=0.635981;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.2:3323841 chr02:003323841 0 W/3323841-3323841 FN990-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g06600 receptor-like protein kinase 2 precursor, putative, expressed SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN3857-S.SNP.2:3336863 chr02:003336863 0 W/3336863-3336863 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.950106;DP=3297;DP4=1453,1711,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.03081e-06;MQSB=0.735804;RPB=0.833711;SGB=55.806;VDB=0.871028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G224D|348|LOC_Os02g06630|protein_coding|CODING|LOC_Os02g06630.1|4|1) FN-274.SNP.2:3343332 chr02:003343332 0 W/3343332-3343332 FN-274 Single Base Substitution A-T INTERGENIC HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3835-S.SNP.2:3344790 chr02:003344790 0 W/3344790-3344790 FN3835-S SNP C -> A AC=1;AN=190;BQB=0.952869;DP=2496;DP4=1086,1341,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.54651e-07;MQSB=0.998876;RPB=0.702655;SGB=25.439;VDB=0.812497;EFF=UTR_3_PRIME(MODIFIER||363||67|LOC_Os02g06650|protein_coding|CODING|LOC_Os02g06650.1|3|1) FN3570-S.SNP.2:3346723 chr02:003346723 0 W/3346723-3346723 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.96676;DP=2822;DP4=1458,1296,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20959e-06;MQSB=0.882538;RPB=0.999417;SGB=25.439;VDB=0.193383;EFF=INTRON(MODIFIER||||67|LOC_Os02g06650|protein_coding|CODING|LOC_Os02g06650.1|1|1) W450-6-1.SNP.2:3356184 chr02:003356184 0 W/3356184-3356184 W450-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1652-S.SNP.2:3370070 chr02:003370070 0 W/3370070-3370070 FN1652-S Single Base Substitution G-C INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2489.SNP.2:3373344 chr02:003373344 0 W/3373344-3373344 FN2489 SNP A -> C AC=1;AN=200;BQB=0.120873;DP=5145;DP4=2512,2357,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1367e-10;MQSB=0.953832;RPB=0.780829;SGB=91.1059;VDB=0.460365;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.2:3380608 chr02:003380608 0 W/3380608-3380608 FN1661-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g06725 expressed protein SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2209-S.SNP.2:3386552 chr02:003386552 0 W/3386552-3386552 FN2209-S SNP C -> T AC=2;AN=190;BQB=0.502649;DP=3941;DP4=1877,1658,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.67256e-15;MQSB=0.0196233;RPB=0.395601;SGB=-3.80607;VDB=0.181513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.2:3392122 chr02:003392122 0 W/3392122-3392122 FN2540-S SNP A -> G AC=1;AN=198;BQB=0.502618;DP=4474;DP4=2144,2134,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.92968e-09;MQSB=0.851943;RPB=0.335138;SGB=40.149;VDB=0.834076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.2:3394318 chr02:003394318 0 W/3394318-3394318 FN3444-S SNP G -> T AC=1;AN=184;BQB=0.91109;DP=3049;DP4=1316,1665,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.190226;MQB=0.558195;MQSB=0;RPB=0.964881;SGB=25.1826;VDB=0.698224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G156V|1196|LOC_Os02g06740|protein_coding|CODING|LOC_Os02g06740.1|4|1) FN2607-S.SNP.2:3399364 chr02:003399364 0 W/3399364-3399364 FN2607-S SNP G -> A AC=2;AN=198;BQB=0.854852;DP=3571;DP4=1810,1524,9,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.69304e-14;MQSB=0.499701;RPB=0.815623;SGB=47.5102;VDB=0.449173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.2:3400022 chr02:003400022 0 W/3400022-3400022 FN2602-S SNP A -> G AC=1;AN=198;BQB=0.797942;DP=4626;DP4=2152,2240,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.76463e-13;MQSB=0.971045;RPB=0.978338;SGB=90.9049;VDB=0.880005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.2:3402067 chr02:003402067 0 W/3402067-3402067 FN-219 Single Base Substitution G-A INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN772-S.SNP.2:3402405 chr02:003402405 0 W/3402405-3402405 FN772-S Single Base Substitution G-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN908-S.SNP.2:3405171 chr02:003405171 0 W/3405171-3405171 FN908-S Single Base Substitution C-T INTRON HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3302-S.SNP.2:3410787 chr02:003410787 0 W/3410787-3410787 FN3302-S SNP G -> A AC=2;AN=184;BQB=0.980261;DP=3031;DP4=1552,1312,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.00072e-10;MQSB=0.994338;RPB=0.0490005;SGB=35.884;VDB=0.0744217;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.2:3413600 chr02:003413600 0 W/3413600-3413600 FN-217 Single Base Substitution A-C INTRON HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3575-S.SNP.2:3414537 chr02:003414537 0 W/3414537-3414537 FN3575-S SNP T -> C AC=2;AN=188;BQB=0.941356;DP=2869;DP4=1144,1579,16,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.81664e-26;MQSB=0.91287;RPB=0.672046;SGB=185.278;VDB=0.562957;EFF=INTRON(MODIFIER||||84|LOC_Os02g06760|protein_coding|CODING|LOC_Os02g06760.2|3|1),INTRON(MODIFIER||||96|LOC_Os02g06760|protein_coding|CODING|LOC_Os02g06760.3|3|1),INTRON(MODIFIER||||108|LOC_Os02g06760|protein_coding|CODING|LOC_Os02g06760.1|3|1) FN2444.SNP.2:3416255 chr02:003416255 0 W/3416255-3416255 FN2444 SNP T -> A AC=1;AN=200;BQB=0.954873;DP=4972;DP4=2449,2269,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18864e-07;MQSB=0.826099;RPB=0.598335;SGB=45.0543;VDB=0.928696;EFF=INTRON(MODIFIER||||126|LOC_Os02g06770|protein_coding|CODING|LOC_Os02g06770.1|3|1),INTRON(MODIFIER||||126|LOC_Os02g06770|protein_coding|CODING|LOC_Os02g06770.2|2|1),INTRON(MODIFIER||||107|LOC_Os02g06770|protein_coding|CODING|LOC_Os02g06770.3|2|1) FN4116-S.SNP.2:3426749 chr02:003426749 0 W/3426749-3426749 FN4116-S SNP G -> C AC=1;AN=182;BQB=0.533762;DP=2748;DP4=1528,1101,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.64922e-07;MQSB=0.985985;RPB=0.826415;SGB=39.1386;VDB=0.410041;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.2:3428341 chr02:003428341 0 W/3428341-3428341 FN373-S Single Base Substitution C-T INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN718-S.SNP.2:3429303 chr02:003429303 0 W/3429303-3429303 FN718-S Single Base Substitution C-T INTRON HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN4108-S.SNP.2:3434899 chr02:003434899 0 W/3434899-3434899 FN4108-S SNP G -> T AC=1;AN=182;BQB=0.977047;DP=2830;DP4=1379,1396,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000353357;MQB=5.4822e-08;MQSB=0.934066;RPB=0.998559;SGB=53.1331;VDB=0.80896;EFF=SPLICE_SITE_REGION(LOW||||1286|LOC_Os02g06810|protein_coding|CODING|LOC_Os02g06810.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R1125|1286|LOC_Os02g06810|protein_coding|CODING|LOC_Os02g06810.1|4|1) FN1673-S.SNP.2:3435837 chr02:003435837 0 W/3435837-3435837 FN1673-S SNP C -> T AC=2;AN=188;BQB=0.167618;DP=1596;DP4=745,821,10,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.91041e-05;MQSB=0.458934;RPB=0.999725;SGB=-35.9944;VDB=0.950958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G833E|1286|LOC_Os02g06810|protein_coding|CODING|LOC_Os02g06810.1|3|1) FN2453.SNP.2:3438198 chr02:003438198 0 W/3438198-3438198 FN2453 SNP C -> T AC=1;AN=200;BQB=0.291804;DP=4108;DP4=1985,1893,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.23758e-06;MQSB=0.802386;RPB=0.931917;SGB=36.6644;VDB=0.928194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D99N|1286|LOC_Os02g06810|protein_coding|CODING|LOC_Os02g06810.1|1|1) FN2731-S.SNP.2:3444345 chr02:003444345 0 W/3444345-3444345 FN2731-S SNP T -> A AC=1;AN=200;BQB=0.758338;DP=4368;DP4=2051,2045,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32407e-11;MQSB=0.990468;RPB=0.649662;SGB=9.48993;VDB=0.264368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K710I|1050|LOC_Os02g06830|protein_coding|CODING|LOC_Os02g06830.1|15|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K710I|1012|LOC_Os02g06830|protein_coding|CODING|LOC_Os02g06830.2|15|1) FN462-S.SNP.2:3447289 chr02:003447289 0 W/3447289-3447289 FN462-S Single Base Substitution T-C INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2621-S.SNP.2:3462734 chr02:003462734 0 W/3462734-3462734 FN2621-S SNP C -> G AC=1;AN=200;BQB=0.42055;DP=4425;DP4=2311,1886,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.5739e-16;MQSB=0.992483;RPB=0.921813;SGB=109.527;VDB=0.939122;EFF=INTRON(MODIFIER||||1005|LOC_Os02g06870|protein_coding|CODING|LOC_Os02g06870.1|2|1) FN2568-S.SNP.2:3464256 chr02:003464256 0 W/3464256-3464256 FN2568-S SNP G -> A AC=1;AN=198;BQB=0.999611;DP=4004;DP4=1906,1925,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73847e-08;MQSB=0.995078;RPB=0.895169;SGB=18.9639;VDB=0.133653;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S818|1005|LOC_Os02g06870|protein_coding|CODING|LOC_Os02g06870.1|4|1) FN-409.SNP.2:3468886 chr02:003468886 0 W/3468886-3468886 FN-409 Single Base Substitution A-G UTR_3_PRIME HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3803-S.SNP.2:3481069 chr02:003481069 0 W/3481069-3481069 FN3803-S SNP T -> A AC=1;AN=190;BQB=0.986442;DP=2636;DP4=1370,1121,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.31946e-13;MQSB=0.973922;RPB=0.856783;SGB=103.742;VDB=0.748228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.2:3481538 chr02:003481538 0 W/3481538-3481538 FN3630-S SNP A -> T AC=1;AN=190;BQB=0.909364;DP=3100;DP4=1456,1534,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000145362;MQSB=0.951633;RPB=0.473756;SGB=39.9877;VDB=0.023499;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.2:3484076 chr02:003484076 0 W/3484076-3484076 FN780-S Single Base Substitution T-G INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. W450-6-1.SNP.2:3484737 chr02:003484737 0 W/3484737-3484737 W450-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2106-S.SNP.2:3503116 chr02:003503116 0 W/3503116-3503116 FN2106-S SNP G -> A AC=2;AN=168;BQB=0.437354;DP=3925;DP4=2056,1801,23,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.60325e-23;MQSB=0.95389;RPB=0.935965;SGB=-53.7345;VDB=0.786822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.2:3504081 chr02:003504081 0 W/3504081-3504081 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.909326;DP=4724;DP4=2295,2212,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20637e-07;MQSB=0.998398;RPB=0.944038;SGB=19.0642;VDB=0.107775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.2:3516935 chr02:003516935 0 W/3516935-3516935 FN2403 SNP T -> C AC=1;AN=200;BQB=0.306986;DP=4525;DP4=2052,2203,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14343e-10;MQSB=0.988329;RPB=0.790051;SGB=12.7003;VDB=0.733112;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.2:3520128 chr02:003520128 0 W/3520128-3520128 FN-150 Single Base Substitution A-T INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN-80.SNP.2:3520128 chr02:003520128 0 W/3520128-3520128 FN-80 Single Base Substitution A-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN3369-S.SNP.2:3520128 chr02:003520128 0 W/3520128-3520128 FN3369-S SNP A -> T AC=1;AN=184;BQB=0.986851;DP=2359;DP4=1089,1143,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26311e-09;MQSB=0.915891;RPB=0.749572;SGB=9.8459;VDB=0.255873;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.2:3524581 chr02:003524581 0 W/3524581-3524581 FN-86 Single Base Substitution C-T INTRON HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN3373-S.SNP.2:3525358 chr02:003525358 0 W/3525358-3525358 FN3373-S SNP T -> G AC=1;AN=184;BQB=0.951664;DP=3266;DP4=1804,1326,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.0506e-13;MQSB=0.452807;RPB=0.68226;SGB=78.0093;VDB=0.766518;EFF=INTRON(MODIFIER||||503|LOC_Os02g06950|protein_coding|CODING|LOC_Os02g06950.1|4|1) FN-382.SNP.2:3525985 chr02:003525985 0 W/3525985-3525985 FN-382 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN3057-S.SNP.2:3528145 chr02:003528145 0 W/3528145-3528145 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.986606;DP=2759;DP4=1501,1184,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.61239e-08;MQSB=0.982688;RPB=0.569616;SGB=32.2261;VDB=0.737168;EFF=INTRON(MODIFIER||||503|LOC_Os02g06950|protein_coding|CODING|LOC_Os02g06950.1|1|1) FN3947-S.SNP.2:3528613 chr02:003528613 0 W/3528613-3528613 FN3947-S SNP G -> A AC=1;AN=168;BQB=0.66269;DP=2516;DP4=1175,1203,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34021e-10;MQSB=0.992457;RPB=0.776659;SGB=41.6313;VDB=0.538413;EFF=INTRON(MODIFIER||||503|LOC_Os02g06950|protein_coding|CODING|LOC_Os02g06950.1|1|1) FN2630-S.SNP.2:3531828 chr02:003531828 0 W/3531828-3531828 FN2630-S SNP C -> T AC=2;AN=200;BQB=0.929036;DP=4925;DP4=2676,1921,27,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.65069e-29;MQSB=0.999115;RPB=0.226593;SGB=112.85;VDB=0.633111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.2:3532015 chr02:003532015 0 W/3532015-3532015 FN1043-S Single Base Substitution A-G INTERGENIC HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN-204.SNP.2:3532557 chr02:003532557 0 W/3532557-3532557 FN-204 Single Base Substitution A-G INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN343-S.SNP.2:3534478 chr02:003534478 0 W/3534478-3534478 FN343-S Single Base Substitution C-T INTERGENIC HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2093-S.SNP.2:3535851 chr02:003535851 0 W/3535851-3535851 FN2093-S SNP C -> A AC=1;AN=168;BQB=0.00109222;DP=3337;DP4=1553,1685,4,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.825e-05;MQSB=0.999716;RPB=0.974649;SGB=-90.3546;VDB=0.965147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.2:3553841 chr02:003553841 0 W/3553841-3553841 FN3520-S SNP G -> T AC=1;AN=188;BQB=0.907034;DP=3116;DP4=1263,1781,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.82632e-11;MQSB=0.609191;RPB=0.999977;SGB=85.3253;VDB=0.387945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.2:3555881 chr02:003555881 0 W/3555881-3555881 FN3057-S SNP G -> T AC=1;AN=184;BQB=0.91916;DP=3168;DP4=1630,1402,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.77117e-06;MQSB=0.415501;RPB=0.992326;SGB=39.2697;VDB=0.120429;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.2:3562564 chr02:003562564 0 W/3562564-3562564 FN-281 Single Base Substitution G-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-401.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN-401 Single Base Substitution G-A INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN1022-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1627-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN1627-S Single Base Substitution G-A INTERGENIC Homo SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2698-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN2698-S SNP G -> A AC=2;AN=200;BQB=0.125911;DP=4578;DP4=2381,1908,19,15;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0214067;MQB=0.867528;MQSB=6.09196e-10;RPB=0.876374;SGB=112.373;VDB=0.44379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN3050-S SNP G -> A AC=2;AN=184;BQB=0.781203;DP=3335;DP4=1673,1466,12,12;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.0284858;MQB=0.87775;MQSB=3.61559e-21;RPB=0.898782;SGB=74.4875;VDB=0.916683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN3495-S SNP G -> A AC=1;AN=188;BQB=0.995813;DP=2940;DP4=1485,1348,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0289116;MQB=0.521202;MQSB=3.35043e-31;RPB=0.519451;SGB=44.4357;VDB=0.829708;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.2:3579220 chr02:003579220 0 W/3579220-3579220 FN401-S Single Base Substitution G-A INTERGENIC HOMO SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN892-S.SNP.2:3579337 chr02:003579337 0 W/3579337-3579337 FN892-S Single Base Substitution G-A INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-119.SNP.2:3580859 chr02:003580859 0 W/3580859-3580859 FN-119 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2120-S.SNP.2:3583831 chr02:003583831 0 W/3583831-3583831 FN2120-S SNP C -> T AC=1;AN=168;BQB=0.108402;DP=3899;DP4=2166,1692,17,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58247e-11;MQSB=0.997238;RPB=0.950359;SGB=-82.1908;VDB=0.0571994;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.2:3584575 chr02:003584575 0 W/3584575-3584575 FN-289 Single Base Substitution C-G INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN2291.SNP.2:3585128 chr02:003585128 0 W/3585128-3585128 FN2291 SNP A -> G AC=2;AN=192;BQB=0.686247;DP=4291;DP4=1570,1751,30,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.3562e-27;MQSB=0.955909;RPB=0.528515;SGB=89.3869;VDB=0.984513;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.2:3586649 chr02:003586649 0 W/3586649-3586649 FN3883-S SNP G -> A AC=1;AN=158;BQB=0.745714;DP=2342;DP4=1218,1043,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.47598e-06;MQSB=0.299845;RPB=0.887694;SGB=37.4429;VDB=0.682757;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.2:3590682 chr02:003590682 0 W/3590682-3590682 FN4074-S SNP C -> A AC=2;AN=182;BQB=0.93614;DP=2800;DP4=1438,1221,12,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.36525e-11;MQSB=0.984182;RPB=0.795141;SGB=60.2037;VDB=0.986734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.2:3591151 chr02:003591151 0 W/3591151-3591151 FN2430 SNP C -> T AC=1;AN=200;BQB=0.944831;DP=4857;DP4=2016,2496,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37843e-06;MQSB=0.13537;RPB=0.76599;SGB=24.2746;VDB=0.202262;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN-262 Single Base Substitution C-T INTERGENIC HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-329.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN-329 Single Base Substitution C-T INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-341.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN-341 Single Base Substitution C-T INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-82.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN-82 Single Base Substitution C-T INTERGENIC HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1561-S.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN1561-S Single Base Substitution C-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN425-S.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN425-S Single Base Substitution C-T INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN692-S.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN692-S Single Base Substitution C-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN707-S.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN707-S Single Base Substitution C-T INTERGENIC HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN_822-5-1.SNP.2:3598467 chr02:003598467 0 W/3598467-3598467 FN_822-5-1 Single Base Substitution C-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN_N1-220-1.SNP.2:3601028 chr02:003601028 0 W/3601028-3601028 FN_N1-220-1 Single Base Substitution G-C Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN1027-S.SNP.2:3602300 chr02:003602300 0 W/3602300-3602300 FN1027-S Single Base Substitution G-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3455-S.SNP.2:3608618 chr02:003608618 0 W/3608618-3608618 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.886546;DP=2690;DP4=1260,1342,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000548009;MQSB=0.988114;RPB=0.776224;SGB=-5.37184;VDB=0.600144;EFF=INTRON(MODIFIER||||375|LOC_Os02g07040|protein_coding|CODING|LOC_Os02g07040.1|4|1),INTRON(MODIFIER||||372|LOC_Os02g07040|protein_coding|CODING|LOC_Os02g07040.2|4|1) FN2533-S.SNP.2:3610807 chr02:003610807 0 W/3610807-3610807 FN2533-S SNP G -> A AC=1;AN=198;BQB=0.81217;DP=4958;DP4=2123,2494,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000201694;MQB=1.38846e-08;MQSB=0.567291;RPB=0.994194;SGB=63.3342;VDB=0.243516;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.2:3614281 chr02:003614281 0 W/3614281-3614281 FN1229-S Single Base Substitution T-G INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3438-S.SNP.2:3616218 chr02:003616218 0 W/3616218-3616218 FN3438-S SNP A -> G AC=2;AN=184;BQB=0.980062;DP=3297;DP4=1811,1233,30,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.24795e-22;MQSB=0.637633;RPB=0.633469;SGB=43.3252;VDB=0.698925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I316T|811|LOC_Os02g07050|protein_coding|CODING|LOC_Os02g07050.1|1|1) FN527-S.SNP.2:3616376 chr02:003616376 0 W/3616376-3616376 FN527-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1427-S.SNP.2:3616419 chr02:003616419 0 W/3616419-3616419 FN1427-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g07050 pentatricopeptide, putative, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN3514-S.SNP.2:3619515 chr02:003619515 0 W/3619515-3619515 FN3514-S SNP G -> T AC=1;AN=188;BQB=0.420094;DP=2459;DP4=1064,1120,3,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000691621;MQSB=0.842177;RPB=0.613212;SGB=-16.0863;VDB=0.775643;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.2:3625887 chr02:003625887 0 W/3625887-3625887 FN445-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g07070 RNA recognition motif family protein, expressed SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2606-S.SNP.2:3627164 chr02:003627164 0 W/3627164-3627164 FN2606-S SNP C -> T AC=2;AN=198;BQB=0.015124;DP=4293;DP4=2073,2048,8,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.61561e-10;MQSB=0.990017;RPB=0.992847;SGB=72.5245;VDB=0.411493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R406H|1000|LOC_Os02g07070|protein_coding|CODING|LOC_Os02g07070.1|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R334H|889|LOC_Os02g07070|protein_coding|CODING|LOC_Os02g07070.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R406H|887|LOC_Os02g07070|protein_coding|CODING|LOC_Os02g07070.3|11|1) FN-301.SNP.2:3629754 chr02:003629754 0 W/3629754-3629754 FN-301 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g07070 RNA recognition motif family protein, expressed SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-171.SNP.2:3630970 chr02:003630970 0 W/3630970-3630970 FN-171 Single Base Substitution T-C INTRON HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN986-S.SNP.2:3653129 chr02:003653129 0 W/3653129-3653129 FN986-S Single Base Substitution C-A INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3596-S.SNP.2:3653919 chr02:003653919 0 W/3653919-3653919 FN3596-S SNP C -> G AC=2;AN=188;BQB=0.935667;DP=3364;DP4=1283,2005,18,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.53149e-22;MQSB=0.869726;RPB=0.566337;SGB=117.48;VDB=0.151306;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.2:3655678 chr02:003655678 0 W/3655678-3655678 FN-265 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g07110 OsSAUR6 - Auxin-responsive SAUR gene family member, expressed SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1112-S.SNP.2:3657044 chr02:003657044 0 W/3657044-3657044 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658187 chr02:003658187 0 W/3658187-3658187 FN-51 Single Base Substitution T-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658187 chr02:003658187 0 W/3658187-3658187 FN-51 Single Base Substitution T-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658188 chr02:003658188 0 W/3658188-3658188 FN-51 Single Base Substitution G-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658188 chr02:003658188 0 W/3658188-3658188 FN-51 Single Base Substitution G-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658189 chr02:003658189 0 W/3658189-3658189 FN-51 Single Base Substitution G-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:3658189 chr02:003658189 0 W/3658189-3658189 FN-51 Single Base Substitution G-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-105.SNP.2:3666926 chr02:003666926 0 W/3666926-3666926 FN-105 Single Base Substitution G-T INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN1515-S.SNP.2:3671083 chr02:003671083 0 W/3671083-3671083 FN1515-S Single Base Substitution A-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN424-S.SNP.2:3671083 chr02:003671083 0 W/3671083-3671083 FN424-S Single Base Substitution A-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN461-S.SNP.2:3671083 chr02:003671083 0 W/3671083-3671083 FN461-S Single Base Substitution A-T INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN2470.SNP.2:3672975 chr02:003672975 0 W/3672975-3672975 FN2470 SNP T -> A AC=1;AN=200;BQB=0.913242;DP=3916;DP4=2107,1483,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.20682e-08;MQSB=0.267632;RPB=0.737881;SGB=72.6852;VDB=0.912015;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.2:3673998 chr02:003673998 0 W/3673998-3673998 FN4142-S SNP C -> T AC=2;AN=170;BQB=0.905562;DP=2048;DP4=942,987,7,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.29135e-08;MQSB=0.962715;RPB=0.970499;SGB=45.206;VDB=0.275694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.2:3685429 chr02:003685429 0 W/3685429-3685429 FN3850-S SNP G -> A AC=1;AN=158;BQB=0.874327;DP=2601;DP4=1413,1085,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1969e-06;MQSB=0.982473;RPB=0.829977;SGB=30.704;VDB=0.201176;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.2:3698170 chr02:003698170 0 W/3698170-3698170 FN704-S Single Base Substitution A-C INTRON HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN-246.SNP.2:3707259 chr02:003707259 0 W/3707259-3707259 FN-246 Single Base Substitution T-A INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-63.SNP.2:3720732 chr02:003720732 0 W/3720732-3720732 FN-63 Single Base Substitution A-G INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2331.SNP.2:3725630 chr02:003725630 0 W/3725630-3725630 FN2331 SNP A -> G AC=1;AN=192;BQB=0.763693;DP=4848;DP4=1982,2484,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206271;MQB=2.94566e-12;MQSB=0.999996;RPB=0.937961;SGB=57.1218;VDB=0.337077;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.2:3726160 chr02:003726160 0 W/3726160-3726160 FN701-S Single Base Substitution C-G INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3546-S.SNP.2:3727838 chr02:003727838 0 W/3727838-3727838 FN3546-S SNP G -> A AC=1;AN=188;BQB=0.890379;DP=2591;DP4=1195,1325,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.76127e-07;MQSB=0.985689;RPB=0.0133805;SGB=23.5329;VDB=0.170903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D32N|402|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D32N|402|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D32N|371|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.3|2|1) FN3693-S.SNP.2:3730844 chr02:003730844 0 W/3730844-3730844 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.70864;DP=3286;DP4=1705,1327,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.97679e-08;MQSB=0.988409;RPB=0.304272;SGB=50.3161;VDB=0.729376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V362A|402|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V362A|402|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.2|6|1),UTR_3_PRIME(MODIFIER||51||371|LOC_Os02g07260|protein_coding|CODING|LOC_Os02g07260.3|6|1) FN4032-S.SNP.2:3737236 chr02:003737236 0 W/3737236-3737236 FN4032-S SNP C -> T AC=1;AN=168;BQB=0.158029;DP=2943;DP4=1410,1316,40,54;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0829086;MQB=2.98739e-28;MQSB=8.65679e-07;RPB=2.5583e-19;SGB=-1224.23;VDB=0.0572999;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V271|476|LOC_Os02g07280|protein_coding|CODING|LOC_Os02g07280.1|2|1) FN2488.SNP.2:3739493 chr02:003739493 0 W/3739493-3739493 FN2488 SNP G -> A AC=1;AN=200;BQB=0.954524;DP=4852;DP4=2222,2395,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99914e-12;MQSB=0.881821;RPB=0.434319;SGB=-38.0794;VDB=0.0157747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.2:3752470 chr02:003752470 0 W/3752470-3752470 FN2626-S SNP C -> T AC=1;AN=200;BQB=0.71646;DP=4847;DP4=2308,2307,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.43112e-06;MQSB=0.9989;RPB=0.685142;SGB=-16.7412;VDB=0.739361;EFF=INTRON(MODIFIER||||876|LOC_Os02g07310|protein_coding|CODING|LOC_Os02g07310.1|8|1) FN3945-S.SNP.2:3755620 chr02:003755620 0 W/3755620-3755620 FN3945-S SNP C -> T AC=2;AN=168;BQB=0.996027;DP=2850;DP4=1258,1481,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.29466e-14;MQSB=0.781393;RPB=0.324987;SGB=109.773;VDB=0.631186;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.2:3756077 chr02:003756077 0 W/3756077-3756077 FN1572-S Single Base Substitution C-G INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN522-S.SNP.2:3756528 chr02:003756528 0 W/3756528-3756528 FN522-S Single Base Substitution C-G INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN522-S.SNP.2:3756535 chr02:003756535 0 W/3756535-3756535 FN522-S Single Base Substitution A-T INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN910-S.SNP.2:3760275 chr02:003760275 0 W/3760275-3760275 FN910-S Single Base Substitution C-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN-111.SNP.2:3763326 chr02:003763326 0 W/3763326-3763326 FN-111 Single Base Substitution G-C INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1068-S.SNP.2:3794548 chr02:003794548 0 W/3794548-3794548 FN1068-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g07350 inositol-1-monophosphatase, putative, expressed SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN4241-S.SNP.2:3802409 chr02:003802409 0 W/3802409-3802409 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.832544;DP=3119;DP4=1961,1058,15,10;HOB=6.92042e-05;ICB=0.000139222;MQ=17;MQ0F=0.331196;MQB=0.580944;MQSB=0.119203;RPB=0.984916;SGB=76.1898;VDB=0.221198;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.2:3817750 chr02:003817750 0 W/3817750-3817750 FN-101 Single Base Substitution A-T INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3930-S.SNP.2:3818454 chr02:003818454 0 W/3818454-3818454 FN3930-S SNP A -> G AC=1;AN=158;BQB=0.132817;DP=2612;DP4=1351,1012,5,15;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0570444;MQB=0.827602;MQSB=5.71236e-08;RPB=0.920648;SGB=-39.7928;VDB=0.981445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.2:3819737 chr02:003819737 0 W/3819737-3819737 FN3310-S SNP A -> C AC=1;AN=184;BQB=0.85116;DP=4123;DP4=2118,1777,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.208343;MQB=0.361457;MQSB=1.01647e-32;RPB=0.812785;SGB=38.4058;VDB=0.271257;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.2:3822100 chr02:003822100 0 W/3822100-3822100 FN2191-S SNP G -> A AC=1;AN=190;BQB=0.0132521;DP=5396;DP4=1762,3116,11,46;HOB=5.54017e-05;ICB=0.000111386;MQ=18;MQ0F=0.353225;MQB=0.0558706;MQSB=0;RPB=0.0461594;SGB=-1469.34;VDB=0.340513;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R662C|797|LOC_Os02g07400|protein_coding|CODING|LOC_Os02g07400.1|2|1) FN2459.SNP.2:3839847 chr02:003839847 0 W/3839847-3839847 FN2459 SNP G -> C AC=2;AN=200;BQB=0.999942;DP=5052;DP4=2486,2257,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.49227e-26;MQSB=0.748473;RPB=0.794961;SGB=159.24;VDB=0.150857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.2:3840735 chr02:003840735 0 W/3840735-3840735 FN2269-S SNP G -> A AC=1;AN=190;BQB=0.786835;DP=4830;DP4=2233,2318,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.74154e-10;MQSB=0.348427;RPB=0.429592;SGB=33.8752;VDB=0.889657;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.2:3841407 chr02:003841407 0 W/3841407-3841407 FN2085-S SNP A -> T AC=1;AN=168;BQB=0.651927;DP=2536;DP4=1766,731,18,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.87931e-13;MQSB=0.97431;RPB=0.644475;SGB=51.3545;VDB=0.909589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.2:3847445 chr02:003847445 0 W/3847445-3847445 FN3555-S SNP T -> C AC=2;AN=188;BQB=0.968767;DP=2917;DP4=1456,1385,16,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.35047e-20;MQSB=0.99997;RPB=0.999962;SGB=113.937;VDB=0.123774;EFF=INTRON(MODIFIER||||259|LOC_Os02g07450|protein_coding|CODING|LOC_Os02g07450.1|2|1),INTRON(MODIFIER||||259|LOC_Os02g07450|protein_coding|CODING|LOC_Os02g07450.2|1|1) FN-234.SNP.2:3850729 chr02:003850729 0 W/3850729-3850729 FN-234 Single Base Substitution T-A INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-234.SNP.2:3850869 chr02:003850869 0 W/3850869-3850869 FN-234 Single Base Substitution A-G INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3105-S.SNP.2:3852592 chr02:003852592 0 W/3852592-3852592 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.996639;DP=2898;DP4=1318,1448,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2152e-06;MQSB=0.873428;RPB=0.990105;SGB=15.7097;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.2:3854592 chr02:003854592 0 W/3854592-3854592 FN2113-S SNP T -> A AC=1;AN=168;BQB=0.00106638;DP=2999;DP4=1207,1662,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00227104;MQSB=0.518577;RPB=0.869294;SGB=-36.0898;VDB=0.399144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:3860964 chr02:003860964 0 W/3860964-3860964 FN2417 SNP G -> A AC=1;AN=200;BQB=0.969007;DP=5064;DP4=2516,2230,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96433e-10;MQSB=0.866634;RPB=0.996038;SGB=-13.1102;VDB=0.390055;EFF=INTRON(MODIFIER||||419|LOC_Os02g07480|protein_coding|CODING|LOC_Os02g07480.1|6|1),INTRON(MODIFIER||||312|LOC_Os02g07480|protein_coding|CODING|LOC_Os02g07480.2|6|1) FN1532-S.SNP.2:3866566 chr02:003866566 0 W/3866566-3866566 FN1532-S Single Base Substitution T-A INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3593-S.SNP.2:3866912 chr02:003866912 0 W/3866912-3866912 FN3593-S SNP T -> A AC=1;AN=188;BQB=0.504184;DP=3445;DP4=1367,1944,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.93166e-06;MQSB=0.981558;RPB=0.512204;SGB=15.9981;VDB=0.0632579;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.2:3871625 chr02:003871625 0 W/3871625-3871625 FN568-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g07490 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2184-S.SNP.2:3876579 chr02:003876579 0 W/3876579-3876579 FN2184-S SNP T -> C AC=1;AN=190;BQB=0.802825;DP=5272;DP4=2610,2368,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48431e-09;MQSB=0.999582;RPB=0.996549;SGB=23.6597;VDB=0.0404093;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.2:3882185 chr02:003882185 0 W/3882185-3882185 FN1037-S Single Base Substitution G-A INTRON HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN389-S.SNP.2:3885992 chr02:003885992 0 W/3885992-3885992 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1496-S.SNP.2:3888033 chr02:003888033 0 W/3888033-3888033 FN1496-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g07510 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1326-S.SNP.2:3889117 chr02:003889117 0 W/3889117-3889117 FN1326-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN-164.SNP.2:3889748 chr02:003889748 0 W/3889748-3889748 FN-164 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g07520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1212-S.SNP.2:3891138 chr02:003891138 0 W/3891138-3891138 FN1212-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2785-S.SNP.2:3892698 chr02:003892698 0 W/3892698-3892698 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.708824;DP=4036;DP4=2069,1764,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00173439;MQB=1.10673e-08;MQSB=0.824197;RPB=0.859919;SGB=58.7391;VDB=0.732031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R748C|1921|LOC_Os02g07520|protein_coding|CODING|LOC_Os02g07520.1|3|1) FN2375.SNP.2:3900961 chr02:003900961 0 W/3900961-3900961 FN2375 SNP C -> A AC=2;AN=192;BQB=0.282597;DP=5765;DP4=2478,2836,22,11;HOB=0.0206163;ICB=0.494846;MQ=25;MQ0F=0.179185;MQB=0.328944;MQSB=0;RPB=0.114122;SGB=-42.7339;VDB=0.108092;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A601|811|LOC_Os02g07530|protein_coding|CODING|LOC_Os02g07530.1|5|1) FN474-S.SNP.2:3901740 chr02:003901740 0 W/3901740-3901740 FN474-S Single Base Substitution G-A SYNONYMOUS_STOP HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN1755-S.SNP.2:3904061 chr02:003904061 0 W/3904061-3904061 FN1755-S SNP G -> T AC=1;AN=188;BQB=0.994938;DP=2895;DP4=1413,1442,13,16;HOB=5.65867e-05;ICB=0.000113775;MQ=13;MQ0F=0.405527;MQB=0.0563369;MQSB=0.154539;RPB=0.365558;SGB=-7.93693;VDB=0.0282055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q1298K|1964|LOC_Os02g07540|protein_coding|CODING|LOC_Os02g07540.1|3|1) FN2533-S.SNP.2:3905820 chr02:003905820 0 W/3905820-3905820 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.952795;DP=4129;DP4=2124,1740,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0418988;MQB=0.239452;MQSB=0.0169223;RPB=0.925033;SGB=11.1786;VDB=0.690639;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V778|1964|LOC_Os02g07540|protein_coding|CODING|LOC_Os02g07540.1|1|1) FN2359.SNP.2:3915942 chr02:003915942 0 W/3915942-3915942 FN2359 SNP G -> C AC=1;AN=192;BQB=0.876908;DP=4661;DP4=1942,2270,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00944003;MQB=0.0536311;MQSB=0.223176;RPB=0.99738;SGB=-13.64;VDB=0.315752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D994H|1047|LOC_Os02g07560|protein_coding|CODING|LOC_Os02g07560.1|2|1) FN4302-S.SNP.2:3918443 chr02:003918443 0 W/3918443-3918443 FN4302-S SNP A -> T AC=1;AN=170;BQB=0.995024;DP=2399;DP4=1167,1180,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.100042;MQB=0.785827;MQSB=6.49794e-07;RPB=0.971817;SGB=10.1134;VDB=0.453492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S1457T|2027|LOC_Os02g07570|protein_coding|CODING|LOC_Os02g07570.1|2|1) W426-1-1.SNP.2:3926952 chr02:003926952 0 W/3926952-3926952 W426-1-1 Single Base Substitution A-G INTRON HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3940-S.SNP.2:3934718 chr02:003934718 0 W/3934718-3934718 FN3940-S SNP G -> A AC=1;AN=158;BQB=0.956013;DP=1727;DP4=636,1011,3,12;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00347423;MQB=8.64048e-06;MQSB=6.81123e-15;RPB=0.954371;SGB=60.1755;VDB=0.357394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.2:3936923 chr02:003936923 0 W/3936923-3936923 FN1382-S Single Base Substitution G-T INTRON HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN872-S.SNP.2:3939170 chr02:003939170 0 W/3939170-3939170 FN872-S Single Base Substitution G-T INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. W22-2-1.SNP.2:3941238 chr02:003941238 0 W/3941238-3941238 W22-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g07620 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN804-S.SNP.2:3941277 chr02:003941277 0 W/3941277-3941277 FN804-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g07620 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3422-S.SNP.2:3942422 chr02:003942422 0 W/3942422-3942422 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.185022;DP=3245;DP4=1402,1718,23,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00154083;MQB=2.33946e-16;MQSB=0.747011;RPB=0.00126317;SGB=-366.654;VDB=0.503247;EFF=INTRON(MODIFIER||||769|LOC_Os02g07620|protein_coding|CODING|LOC_Os02g07620.1|2|1) FN2628-S.SNP.2:3948092 chr02:003948092 0 W/3948092-3948092 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.958262;DP=4779;DP4=2336,2186,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7972e-07;MQSB=0.975093;RPB=0.767063;SGB=1.46408;VDB=0.0259155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.2:3948118 chr02:003948118 0 W/3948118-3948118 FN2765-S SNP A -> T AC=1;AN=198;BQB=0.878375;DP=4289;DP4=2039,1981,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66965e-08;MQSB=0.981372;RPB=0.900346;SGB=24.1541;VDB=0.08445;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN-110 Single Base Substitution T-A INTERGENIC HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-88.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN-88 Single Base Substitution T-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN1053-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN1053-S Single Base Substitution T-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1497-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN1497-S Single Base Substitution T-A INTERGENIC Homo SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2378.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN2378 SNP T -> A AC=1;AN=192;BQB=0.322339;DP=4627;DP4=2462,1905,18,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.44768e-12;MQSB=0.686794;RPB=0.731803;SGB=-77.4217;VDB=0.950668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN3432-S SNP T -> A AC=2;AN=184;BQB=0.728469;DP=2684;DP4=1558,1036,22,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.98103e-15;MQSB=0.999972;RPB=0.646502;SGB=106.184;VDB=0.377059;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN3860-S SNP T -> A AC=2;AN=158;BQB=0.993513;DP=2390;DP4=1369,936,16,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.12373e-15;MQSB=0.975945;RPB=0.0932591;SGB=98.093;VDB=0.592961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN3951-S SNP T -> A AC=1;AN=168;BQB=0.986958;DP=2397;DP4=1405,902,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00130072;MQSB=0.999049;RPB=0.995719;SGB=25.5891;VDB=0.773058;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN4140-S SNP T -> A AC=2;AN=170;BQB=0.704108;DP=2509;DP4=1455,972,16,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.49836e-15;MQSB=0.912043;RPB=0.992453;SGB=105.627;VDB=0.774423;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN788-S Single Base Substitution T-A INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN923-S.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 FN923-S Single Base Substitution T-A INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. W7-1-1.SNP.2:3959736 chr02:003959736 0 W/3959736-3959736 W7-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN714-S.SNP.2:3962439 chr02:003962439 0 W/3962439-3962439 FN714-S Single Base Substitution G-A INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3468-S.SNP.2:3967628 chr02:003967628 0 W/3967628-3967628 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.882868;DP=2602;DP4=1260,1257,20,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.78161e-15;MQSB=0.0116744;RPB=0.845266;SGB=143.7;VDB=0.819231;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.2:3971653 chr02:003971653 0 W/3971653-3971653 FN2302 SNP G -> T AC=2;AN=192;BQB=0.725255;DP=4493;DP4=2206,2047,26,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000222568;MQB=2.21236e-25;MQSB=0.995389;RPB=0.351061;SGB=150.275;VDB=0.517525;EFF=UTR_5_PRIME(MODIFIER||25||241|LOC_Os02g07650|protein_coding|CODING|LOC_Os02g07650.1|1|1) FN2708-S.SNP.2:3971653 chr02:003971653 0 W/3971653-3971653 FN2708-S SNP G -> T AC=2;AN=200;BQB=0.409558;DP=4425;DP4=2200,1966,29,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.43059e-32;MQSB=0.973725;RPB=0.465833;SGB=125.876;VDB=0.546576;EFF=UTR_5_PRIME(MODIFIER||25||241|LOC_Os02g07650|protein_coding|CODING|LOC_Os02g07650.1|1|1) FN704-S.SNP.2:3971653 chr02:003971653 0 W/3971653-3971653 FN704-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN902-S.SNP.2:3974970 chr02:003974970 0 W/3974970-3974970 FN902-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN955-S.SNP.2:3983349 chr02:003983349 0 W/3983349-3983349 FN955-S Single Base Substitution T-C INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN838-S.SNP.2:3983816 chr02:003983816 0 W/3983816-3983816 FN838-S Single Base Substitution C-A INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN1651-S.SNP.2:3988849 chr02:003988849 0 W/3988849-3988849 FN1651-S Single Base Substitution A-G INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN1158-S.SNP.2:3998001 chr02:003998001 0 W/3998001-3998001 FN1158-S Single Base Substitution C-T INTRON HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2639-S.SNP.2:4003604 chr02:004003604 0 W/4003604-4003604 FN2639-S SNP A -> T AC=1;AN=200;BQB=0.772514;DP=4832;DP4=2122,2443,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08749e-12;MQSB=0.597625;RPB=0.565206;SGB=37.3004;VDB=0.0617705;EFF=INTRON(MODIFIER||||494|LOC_Os02g07680|protein_coding|CODING|LOC_Os02g07680.5|14|1) FN-131.SNP.2:4008622 chr02:004008622 0 W/4008622-4008622 FN-131 Single Base Substitution T-A INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN4117-S.SNP.2:4020400 chr02:004020400 0 W/4020400-4020400 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.986574;DP=2498;DP4=1207,1205,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.28094e-15;MQSB=0.918564;RPB=0.610045;SGB=111.774;VDB=0.139203;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.2:4020722 chr02:004020722 0 W/4020722-4020722 FN990-S Single Base Substitution C-T INTERGENIC HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN510-S.SNP.2:4021158 chr02:004021158 0 W/4021158-4021158 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3946-S.SNP.2:4022314 chr02:004022314 0 W/4022314-4022314 FN3946-S SNP T -> C AC=1;AN=168;BQB=0.879016;DP=2912;DP4=1158,1562,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.4064e-10;MQSB=0.998099;RPB=0.900492;SGB=45.0404;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.2:4036559 chr02:004036559 0 W/4036559-4036559 FN750-S Single Base Substitution A-G INTRON HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN963-S.SNP.2:4038160 chr02:004038160 0 W/4038160-4038160 FN963-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN-201.SNP.2:4041504 chr02:004041504 0 W/4041504-4041504 FN-201 Single Base Substitution T-C INTRON HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2295.SNP.2:4047258 chr02:004047258 0 W/4047258-4047258 FN2295 SNP C -> A AC=1;AN=192;BQB=0.886794;DP=5256;DP4=2339,2644,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.93918e-16;MQSB=0.973635;RPB=0.846089;SGB=57.1218;VDB=0.165311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aAa|T153K|527|LOC_Os02g07760|protein_coding|CODING|LOC_Os02g07760.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aAa|T119K|493|LOC_Os02g07760|protein_coding|CODING|LOC_Os02g07760.2|5|1) FN1287-S.SNP.2:4052247 chr02:004052247 0 W/4052247-4052247 FN1287-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2317.SNP.2:4053433 chr02:004053433 0 W/4053433-4053433 FN2317 SNP C -> T AC=1;AN=192;BQB=0.399965;DP=5123;DP4=2357,2471,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.68014e-08;MQSB=0.98787;RPB=0.48878;SGB=-37.9417;VDB=0.0300387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.2:4054127 chr02:004054127 0 W/4054127-4054127 FN3714-S SNP G -> A AC=2;AN=190;BQB=0.937977;DP=2910;DP4=1391,1375,28,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.69397e-31;MQSB=0.872436;RPB=0.938909;SGB=234.818;VDB=0.726347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.2:4059269 chr02:004059269 0 W/4059269-4059269 FN3751-S SNP T -> C AC=1;AN=190;BQB=0.397923;DP=2606;DP4=1267,1225,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39121e-05;MQSB=0.963277;RPB=0.997392;SGB=23.6597;VDB=0.877136;EFF=INTRON(MODIFIER||||355|LOC_Os02g07770|protein_coding|CODING|LOC_Os02g07770.1|5|1) FN3822-S.SNP.2:4061452 chr02:004061452 0 W/4061452-4061452 FN3822-S SNP G -> T AC=1;AN=190;BQB=0.985048;DP=2677;DP4=1195,1358,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59543e-07;MQSB=0.999858;RPB=0.327269;SGB=18.552;VDB=0.596958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.2:4068038 chr02:004068038 0 W/4068038-4068038 FN3899-S SNP A -> T AC=1;AN=158;BQB=0.616721;DP=2495;DP4=1002,1403,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.040481;MQB=0.718128;MQSB=0;RPB=0.814651;SGB=37.4429;VDB=0.411966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.2:4068042 chr02:004068042 0 W/4068042-4068042 FN2751-S SNP G -> A AC=2;AN=200;BQB=0.996643;DP=4865;DP4=2040,2459,24,18;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.096814;MQB=0.928522;MQSB=4.23972e-19;RPB=0.693997;SGB=94.6142;VDB=0.357789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.2:4070477 chr02:004070477 0 W/4070477-4070477 FN2298 SNP G -> A AC=2;AN=192;BQB=0.172919;DP=4555;DP4=2112,2191,24,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.59803e-28;MQSB=0.977264;RPB=0.443849;SGB=6.67656;VDB=0.242725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.2:4070915 chr02:004070915 0 W/4070915-4070915 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.722401;DP=4565;DP4=2040,2249,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75597e-16;MQSB=0.215296;RPB=0.984513;SGB=-6.57546;VDB=0.997418;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.2:4072992 chr02:004072992 0 W/4072992-4072992 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2600-S.SNP.2:4080938 chr02:004080938 0 W/4080938-4080938 FN2600-S SNP A -> G AC=1;AN=198;BQB=0.997797;DP=2990;DP4=1159,1668,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61247e-08;MQSB=0.999612;RPB=0.871629;SGB=24.1541;VDB=0.601778;EFF=INTRON(MODIFIER||||421|LOC_Os02g07790|protein_coding|CODING|LOC_Os02g07790.1|1|1) FN4139-S.SNP.2:4082586 chr02:004082586 0 W/4082586-4082586 FN4139-S SNP T -> A AC=1;AN=170;BQB=0.605803;DP=2331;DP4=1083,1188,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.79657e-09;MQSB=0.992529;RPB=0.990391;SGB=56.7575;VDB=0.42647;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.2:4084743 chr02:004084743 0 W/4084743-4084743 FN882-S Single Base Substitution T-A INTRON HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN704-S.SNP.2:4090175 chr02:004090175 0 W/4090175-4090175 FN704-S Single Base Substitution C-A INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN978-S.SNP.2:4108019 chr02:004108019 0 W/4108019-4108019 FN978-S Single Base Substitution C-T INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2447.SNP.2:4110411 chr02:004110411 0 W/4110411-4110411 FN2447 SNP T -> G AC=1;AN=200;BQB=0.254416;DP=4065;DP4=2108,1757,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00123074;MQSB=0.777106;RPB=0.873065;SGB=25.849;VDB=0.982834;EFF=INTRON(MODIFIER||||278|LOC_Os02g07840|protein_coding|CODING|LOC_Os02g07840.1|1|1),INTRON(MODIFIER||||277|LOC_Os02g07840|protein_coding|CODING|LOC_Os02g07840.2|1|1) FN3740-S.SNP.2:4114299 chr02:004114299 0 W/4114299-4114299 FN3740-S SNP T -> C AC=1;AN=190;BQB=0.661073;DP=3138;DP4=1611,1402,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02124e-07;MQSB=0.964712;RPB=0.735924;SGB=4.11112;VDB=0.987544;EFF=INTRON(MODIFIER||||675|LOC_Os02g07850|protein_coding|CODING|LOC_Os02g07850.1|1|1) FN-186.SNP.2:4118263 chr02:004118263 0 W/4118263-4118263 FN-186 Single Base Substitution A-T INTRON HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3790-S.SNP.2:4119779 chr02:004119779 0 W/4119779-4119779 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.935173;DP=2479;DP4=1268,1113,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66908e-08;MQSB=0.913558;RPB=0.891968;SGB=53.6492;VDB=0.934274;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.2:4127459 chr02:004127459 0 W/4127459-4127459 FN-120 Single Base Substitution T-A UTR_3_PRIME HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1452-S.SNP.2:4134343 chr02:004134343 0 W/4134343-4134343 FN1452-S Single Base Substitution G-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN-181.SNP.2:4134492 chr02:004134492 0 W/4134492-4134492 FN-181 Single Base Substitution C-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3866-S.SNP.2:4134925 chr02:004134925 0 W/4134925-4134925 FN3866-S SNP C -> T AC=2;AN=158;BQB=0.676994;DP=2059;DP4=889,1053,11,8;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=3.65044e-05;MQSB=8.25693e-16;RPB=0.880982;SGB=30.927;VDB=0.36825;EFF=START_GAINED(LOW||||144|LOC_Os02g07890|protein_coding|CODING|LOC_Os02g07890.2|1|1),START_GAINED(LOW||||107|LOC_Os02g07890|protein_coding|CODING|LOC_Os02g07890.3|1|1),UTR_5_PRIME(MODIFIER||32||144|LOC_Os02g07890|protein_coding|CODING|LOC_Os02g07890.2|1|1),UTR_5_PRIME(MODIFIER||32||107|LOC_Os02g07890|protein_coding|CODING|LOC_Os02g07890.3|1|1) FN2298.SNP.2:4137975 chr02:004137975 0 W/4137975-4137975 FN2298 SNP G -> A AC=2;AN=192;BQB=0.998285;DP=4766;DP4=2270,2228,27,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.11792e-27;MQSB=0.845335;RPB=0.726945;SGB=108.409;VDB=0.175068;EFF=INTRON(MODIFIER||||583|LOC_Os02g07900|protein_coding|CODING|LOC_Os02g07900.1|10|1) FN2621-S.SNP.2:4157048 chr02:004157048 0 W/4157048-4157048 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.964857;DP=5284;DP4=2314,2700,11,15;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.161241;MQB=0.310958;MQSB=0;RPB=0.692054;SGB=83.5316;VDB=0.785203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.2:4158724 chr02:004158724 0 W/4158724-4158724 FN2390 SNP T -> C AC=2;AN=200;BQB=0.206585;DP=3258;DP4=1207,1559,17,21;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00736648;MQB=6.89704e-12;MQSB=0.174053;RPB=0.833957;SGB=-43.607;VDB=0.101069;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.2:4168161 chr02:004168161 0 W/4168161-4168161 FN1658-S SNP T -> C AC=2;AN=188;BQB=0.988915;DP=3841;DP4=1949,1826,21,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.88736e-24;MQSB=0.999937;RPB=0.999997;SGB=-47.4121;VDB=0.2966;EFF=UTR_3_PRIME(MODIFIER||6||795|LOC_Os02g07960|protein_coding|CODING|LOC_Os02g07960.4|17|1),UTR_3_PRIME(MODIFIER||6||736|LOC_Os02g07960|protein_coding|CODING|LOC_Os02g07960.2|17|1),UTR_3_PRIME(MODIFIER||6||795|LOC_Os02g07960|protein_coding|CODING|LOC_Os02g07960.3|17|1) FN813-S.SNP.2:4194148 chr02:004194148 0 W/4194148-4194148 FN813-S Single Base Substitution T-C INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN-278.SNP.2:4203124 chr02:004203124 0 W/4203124-4203124 FN-278 Single Base Substitution C-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-69.SNP.2:4203248 chr02:004203248 0 W/4203248-4203248 FN-69 Single Base Substitution G-T INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN3786-S.SNP.2:4209482 chr02:004209482 0 W/4209482-4209482 FN3786-S SNP C -> A AC=1;AN=190;BQB=0.0127763;DP=2760;DP4=1265,1103,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.75034e-05;MQSB=0.537774;RPB=0.829359;SGB=-34.9861;VDB=0.795712;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.2:4211588 chr02:004211588 0 W/4211588-4211588 FN464-S Single Base Substitution G-A INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. W22-2-1.SNP.2:4212093 chr02:004212093 0 W/4212093-4212093 W22-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2213-S.SNP.2:4213008 chr02:004213008 0 W/4213008-4213008 FN2213-S SNP T -> G AC=1;AN=190;BQB=0.428339;DP=4855;DP4=2516,2025,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20919e-09;MQSB=0.85598;RPB=0.909521;SGB=57.4238;VDB=0.366435;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.2:4213916 chr02:004213916 0 W/4213916-4213916 FN-250 Single Base Substitution A-G INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1737-S.SNP.2:4213916 chr02:004213916 0 W/4213916-4213916 FN1737-S SNP A -> G AC=1;AN=188;BQB=0.903708;DP=3454;DP4=1253,2144,12,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.92468e-15;MQSB=0.995271;RPB=0.996882;SGB=-6.85034;VDB=0.653055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.2:4214445 chr02:004214445 0 W/4214445-4214445 FN3591-S SNP C -> A AC=1;AN=188;BQB=0.86125;DP=3169;DP4=1418,1675,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1412e-08;MQSB=0.987419;RPB=0.998959;SGB=71.6954;VDB=0.260103;EFF=INTRON(MODIFIER||||85|LOC_Os02g08020|protein_coding|CODING|LOC_Os02g08020.1|1|1) FN1452-S.SNP.2:4219768 chr02:004219768 0 W/4219768-4219768 FN1452-S Single Base Substitution A-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN4260-S.SNP.2:4221354 chr02:004221354 0 W/4221354-4221354 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.500648;DP=2514;DP4=1228,1230,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.27005e-10;MQSB=0.969555;RPB=0.389123;SGB=87.856;VDB=0.564411;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L240F|316|LOC_Os02g08030|protein_coding|CODING|LOC_Os02g08030.1|7|1) FN3923-S.SNP.2:4222129 chr02:004222129 0 W/4222129-4222129 FN3923-S SNP C -> A AC=1;AN=158;BQB=0.730047;DP=2546;DP4=1268,1194,7,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.73111e-11;MQSB=0.671273;RPB=0.937773;SGB=54.2901;VDB=0.774604;EFF=INTRON(MODIFIER||||316|LOC_Os02g08030|protein_coding|CODING|LOC_Os02g08030.1|4|1) FN-104.SNP.2:4222790 chr02:004222790 0 W/4222790-4222790 FN-104 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g08030 aldose 1-epimerase, putative, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1723-S.SNP.2:4225830 chr02:004225830 0 W/4225830-4225830 FN1723-S SNP G -> A AC=2;AN=188;BQB=0.598046;DP=3855;DP4=1814,1988,20,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.9208e-21;MQSB=0.99899;RPB=0.393294;SGB=-2.50398;VDB=0.050889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.2:4229149 chr02:004229149 0 W/4229149-4229149 FN3457-S SNP G -> C AC=1;AN=184;BQB=0.997242;DP=2928;DP4=1198,1473,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00034153;MQB=2.58883e-08;MQSB=0.342261;RPB=0.570989;SGB=8.32411;VDB=0.632406;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.2:4236287 chr02:004236287 0 W/4236287-4236287 FN1464-S Single Base Substitution C-G INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2788-S.SNP.2:4242185 chr02:004242185 0 W/4242185-4242185 FN2788-S SNP T -> C AC=1;AN=198;BQB=0.740588;DP=4306;DP4=1912,2057,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.06136e-06;MQSB=0.963159;RPB=0.719542;SGB=-0.221308;VDB=0.0715993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.2:4242583 chr02:004242583 0 W/4242583-4242583 FN1647-S Single Base Substitution T-A INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1634-S.SNP.2:4252267 chr02:004252267 0 W/4252267-4252267 FN1634-S Single Base Substitution A-T INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN891-S.SNP.2:4255288 chr02:004255288 0 W/4255288-4255288 FN891-S Single Base Substitution A-C INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2430.SNP.2:4267803 chr02:004267803 0 W/4267803-4267803 FN2430 SNP A -> G AC=1;AN=200;BQB=0.414604;DP=4779;DP4=2180,2313,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209249;MQB=7.93223e-13;MQSB=0.996698;RPB=0.936267;SGB=61.9006;VDB=0.995679;EFF=INTRON(MODIFIER||||475|LOC_Os02g08080|protein_coding|CODING|LOC_Os02g08080.1|1|1) FN2756-S.SNP.2:4273579 chr02:004273579 0 W/4273579-4273579 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.897851;DP=4444;DP4=1865,2311,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86473e-09;MQSB=0.953413;RPB=0.918262;SGB=12.7003;VDB=0.990744;EFF=INTRON(MODIFIER||||74|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.1|1|1|WARNING_TRANSCRIPT_NO_START_CODON),INTRON(MODIFIER||||59|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.2|1|1) FN3821-S.SNP.2:4273887 chr02:004273887 0 W/4273887-4273887 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.855646;DP=2650;DP4=1528,1005,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.70317e-17;MQSB=0.991793;RPB=0.393907;SGB=112.85;VDB=0.977461;EFF=INTRON(MODIFIER||||74|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.1|1|1|WARNING_TRANSCRIPT_NO_START_CODON),INTRON(MODIFIER||||59|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.2|1|1) FN3821-S.SNP.2:4273888 chr02:004273888 0 W/4273888-4273888 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.999987;DP=2658;DP4=1486,1001,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.92962e-17;MQSB=0.995634;RPB=0.254501;SGB=51.7524;VDB=0.927809;EFF=INTRON(MODIFIER||||74|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.1|1|1|WARNING_TRANSCRIPT_NO_START_CODON),INTRON(MODIFIER||||59|LOC_Os02g08090|protein_coding|CODING|LOC_Os02g08090.2|1|1) FN883-S.SNP.2:4276599 chr02:004276599 0 W/4276599-4276599 FN883-S Single Base Substitution C-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3705-S.SNP.2:4278998 chr02:004278998 0 W/4278998-4278998 FN3705-S SNP G -> T AC=2;AN=190;BQB=0.630541;DP=2836;DP4=1298,1279,4,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.64827e-08;MQSB=0.37845;RPB=0.236344;SGB=58.2031;VDB=0.0310342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.2:4285531 chr02:004285531 0 W/4285531-4285531 FN3460-S SNP C -> T AC=1;AN=184;BQB=0.982546;DP=2985;DP4=1811,1084,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.61014e-08;MQSB=0.672653;RPB=0.808568;SGB=32.2261;VDB=0.575341;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I518|554|LOC_Os02g08100|protein_coding|CODING|LOC_Os02g08100.1|6|1) FN4070-S.SNP.2:4286588 chr02:004286588 0 W/4286588-4286588 FN4070-S SNP G -> A AC=2;AN=182;BQB=0.736384;DP=2764;DP4=1330,1294,24,30;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.75745e-30;MQSB=0.980483;RPB=0.738737;SGB=201.086;VDB=0.755687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.2:4287066 chr02:004287066 0 W/4287066-4287066 FN2447 SNP C -> A AC=1;AN=200;BQB=0.131001;DP=4857;DP4=2196,2402,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.26373e-11;MQSB=0.92227;RPB=0.251491;SGB=81.8956;VDB=0.572957;EFF=UTR_3_PRIME(MODIFIER||138||195|LOC_Os02g08110|protein_coding|CODING|LOC_Os02g08110.1|3|1) FN2723-S.SNP.2:4287145 chr02:004287145 0 W/4287145-4287145 FN2723-S SNP G -> A AC=2;AN=200;BQB=0.9392;DP=5105;DP4=2637,2202,18,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.61063e-22;MQSB=0.9967;RPB=0.997426;SGB=76.378;VDB=0.573763;EFF=UTR_3_PRIME(MODIFIER||59||195|LOC_Os02g08110|protein_coding|CODING|LOC_Os02g08110.1|3|1) FN4146-S.SNP.2:4294285 chr02:004294285 0 W/4294285-4294285 FN4146-S SNP T -> G AC=1;AN=170;BQB=0.960582;DP=2537;DP4=1192,1186,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.66488e-11;MQSB=0.849319;RPB=0.982255;SGB=58.9766;VDB=0.820645;EFF=INTRON(MODIFIER||||624|LOC_Os02g08120|protein_coding|CODING|LOC_Os02g08120.2|8|1),INTRON(MODIFIER||||629|LOC_Os02g08120|protein_coding|CODING|LOC_Os02g08120.1|8|1) FN1214-S.SNP.2:4300366 chr02:004300366 0 W/4300366-4300366 FN1214-S Single Base Substitution G-T INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN569-S.SNP.2:4304780 chr02:004304780 0 W/4304780-4304780 FN569-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g08130 FGGY family of carbohydrate kinases, putative, expressed SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN1293-S.SNP.2:4306382 chr02:004306382 0 W/4306382-4306382 FN1293-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g08130 FGGY family of carbohydrate kinases, putative, expressed SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1241-S.SNP.2:4314960 chr02:004314960 0 W/4314960-4314960 FN1241-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1256-S.SNP.2:4314960 chr02:004314960 0 W/4314960-4314960 FN1256-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN4231-S.SNP.2:4315245 chr02:004315245 0 W/4315245-4315245 FN4231-S SNP C -> G AC=1;AN=170;BQB=0.985405;DP=2344;DP4=1170,1086,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000415364;MQSB=0.63077;RPB=0.502755;SGB=17.6652;VDB=0.716595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.2:4325682 chr02:004325682 0 W/4325682-4325682 FN2539-S SNP C -> T AC=1;AN=198;BQB=0.894071;DP=4668;DP4=2106,2233,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.80577e-11;MQSB=0.880647;RPB=0.462312;SGB=50.9344;VDB=0.685994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2253-S.SNP.2:4327973 chr02:004327973 0 W/4327973-4327973 FN2253-S SNP T -> A AC=1;AN=190;BQB=0.057537;DP=4705;DP4=2154,2216,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00105494;MQSB=0.9673;RPB=0.694506;SGB=-33.6477;VDB=0.519344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.2:4337689 chr02:004337689 0 W/4337689-4337689 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.599793;DP=3318;DP4=1080,1735,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.80034e-08;MQSB=0.347534;RPB=0.899634;SGB=6.15916;VDB=0.86937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A108T|649|LOC_Os02g08190|protein_coding|CODING|LOC_Os02g08190.1|1|1) FN2554-S.SNP.2:4337693 chr02:004337693 0 W/4337693-4337693 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.288959;DP=3314;DP4=1119,2022,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20959e-08;MQSB=0.327818;RPB=0.982366;SGB=67.9293;VDB=0.620972;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P106|649|LOC_Os02g08190|protein_coding|CODING|LOC_Os02g08190.1|1|1) FN888-S.SNP.2:4338480 chr02:004338480 0 W/4338480-4338480 FN888-S Single Base Substitution G-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN440-S.SNP.2:4345924 chr02:004345924 0 W/4345924-4345924 FN440-S Single Base Substitution G-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN3399-S.SNP.2:4353368 chr02:004353368 0 W/4353368-4353368 FN3399-S SNP G -> A AC=1;AN=184;BQB=0.992318;DP=2098;DP4=756,1232,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82344e-05;MQSB=0.51966;RPB=0.365763;SGB=25.1826;VDB=0.121318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.2:4353505 chr02:004353505 0 W/4353505-4353505 FN2344 SNP G -> A AC=2;AN=192;BQB=0.044185;DP=3549;DP4=1517,1550,25,20;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.06652e-15;MQSB=0.43357;RPB=0.643997;SGB=100.716;VDB=0.421576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.2:4353988 chr02:004353988 0 W/4353988-4353988 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.924242;DP=3933;DP4=2005,1434,15,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00152555;MQB=3.09088e-06;MQSB=0.0104922;RPB=0.819818;SGB=69.1109;VDB=0.911233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.2:4358256 chr02:004358256 0 W/4358256-4358256 FN2379 SNP T -> G AC=2;AN=192;BQB=0.566854;DP=4761;DP4=1913,2422,26,62;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=0;MQSB=0.409624;RPB=0.951171;SGB=341.991;VDB=0.695077;EFF=INTRON(MODIFIER||||628|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.1|6|1),INTRON(MODIFIER||||561|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.2|5|1) FN4185-S.SNP.2:4360118 chr02:004360118 0 W/4360118-4360118 FN4185-S SNP T -> G AC=2;AN=170;BQB=0.661743;DP=2452;DP4=1104,1279,10,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.99301e-13;MQSB=0.941253;RPB=0.351375;SGB=69.3045;VDB=0.201086;EFF=INTRON(MODIFIER||||628|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.1|3|1),INTRON(MODIFIER||||561|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.2|2|1) FN4185-S.SNP.2:4360121 chr02:004360121 0 W/4360121-4360121 FN4185-S SNP A -> G AC=2;AN=170;BQB=0.509319;DP=2447;DP4=1098,1264,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.20743e-12;MQSB=0.935665;RPB=0.0162454;SGB=62.4192;VDB=0.0121792;EFF=INTRON(MODIFIER||||628|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.1|3|1),INTRON(MODIFIER||||561|LOC_Os02g08230|protein_coding|CODING|LOC_Os02g08230.2|2|1) FN3407-S.SNP.2:4365474 chr02:004365474 0 W/4365474-4365474 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.16127;DP=2927;DP4=1492,1344,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000382153;MQSB=0.997128;RPB=0.982925;SGB=28.7043;VDB=0.996102;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.2:4367213 chr02:004367213 0 W/4367213-4367213 FN788-S Single Base Substitution A-G INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1273-S.SNP.2:4371180 chr02:004371180 0 W/4371180-4371180 FN1273-S Single Base Substitution A-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN2702-S.SNP.2:4374852 chr02:004374852 0 W/4374852-4374852 FN2702-S SNP T -> A AC=1;AN=200;BQB=0.651478;DP=4820;DP4=2331,2188,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.75782e-08;MQSB=0.620942;RPB=0.0508241;SGB=16.4591;VDB=0.0173969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.2:4374854 chr02:004374854 0 W/4374854-4374854 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.970952;DP=4828;DP4=2364,2194,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64752e-07;MQSB=0.499082;RPB=0.258864;SGB=45.0543;VDB=0.0801279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.2:4375826 chr02:004375826 0 W/4375826-4375826 FN3456-S SNP C -> T AC=1;AN=184;BQB=0.986095;DP=2887;DP4=1390,1380,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000289308;MQSB=0.805624;RPB=0.377728;SGB=39.699;VDB=0.086416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1449-S.SNP.2:4379571 chr02:004379571 0 W/4379571-4379571 FN1449-S Single Base Substitution C-A INTRON HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN3717-S.SNP.2:4386914 chr02:004386914 0 W/4386914-4386914 FN3717-S SNP T -> C AC=1;AN=190;BQB=0.960906;DP=3091;DP4=1416,1540,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00021983;MQSB=0.999749;RPB=0.148303;SGB=21.7749;VDB=0.0243922;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V183A|228|LOC_Os02g08260|protein_coding|CODING|LOC_Os02g08260.1|6|1),SPLICE_SITE_REGION(LOW||||228|LOC_Os02g08260|protein_coding|CODING|LOC_Os02g08260.1|6|1) FN1156-XA21.SNP.2:4390881 chr02:004390881 0 W/4390881-4390881 FN1156-XA21 Single Base Substitution A-T INTRON Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2398.SNP.2:4391368 chr02:004391368 0 W/4391368-4391368 FN2398 SNP C -> T AC=1;AN=200;BQB=0.999722;DP=4885;DP4=2186,2410,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87714e-10;MQSB=0.940255;RPB=0.718448;SGB=9.48993;VDB=0.576628;EFF=INTRON(MODIFIER||||299|LOC_Os02g08270|protein_coding|CODING|LOC_Os02g08270.1|3|1) FN2207-S.SNP.2:4398262 chr02:004398262 0 W/4398262-4398262 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.210973;DP=5306;DP4=1996,2998,13,19;HOB=0.020831;ICB=0.494793;MQ=26;MQ0F=0.157934;MQB=0.546829;MQSB=0;RPB=0.425551;SGB=-6.02158;VDB=0.522291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P643L|931|LOC_Os02g08280|protein_coding|CODING|LOC_Os02g08280.1|4|1) FN3673-S.SNP.2:4398672 chr02:004398672 0 W/4398672-4398672 FN3673-S SNP C -> T AC=1;AN=190;BQB=0.267768;DP=2849;DP4=1317,1435,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00702001;MQB=8.82954e-05;MQSB=0.0286377;RPB=0.951861;SGB=32.5467;VDB=0.629855;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A506|931|LOC_Os02g08280|protein_coding|CODING|LOC_Os02g08280.1|4|1) FN814-S.SNP.2:4401503 chr02:004401503 0 W/4401503-4401503 FN814-S Single Base Substitution C-T INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3383-S.SNP.2:4402124 chr02:004402124 0 W/4402124-4402124 FN3383-S SNP C -> T AC=2;AN=184;BQB=0.927848;DP=2414;DP4=728,1559,14,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.61216e-17;MQSB=0.934214;RPB=0.722593;SGB=165.41;VDB=0.972949;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.2:4402124 chr02:004402124 0 W/4402124-4402124 FN3454-S SNP C -> T AC=2;AN=184;BQB=0.999982;DP=2350;DP4=717,1530,7,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.54801e-11;MQSB=0.925165;RPB=0.581023;SGB=98.4821;VDB=0.995233;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.2:4402124 chr02:004402124 0 W/4402124-4402124 FN723-S Single Base Substitution C-T INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN825-S.SNP.2:4402218 chr02:004402218 0 W/4402218-4402218 FN825-S Single Base Substitution C-T INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2351.SNP.2:4406314 chr02:004406314 0 W/4406314-4406314 FN2351 SNP C -> T AC=1;AN=192;BQB=0.997848;DP=5318;DP4=2846,2183,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.105867;MQB=0.628623;MQSB=0;RPB=0.744513;SGB=16.0922;VDB=0.0684329;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M80I|880|LOC_Os02g08290|protein_coding|CODING|LOC_Os02g08290.1|1|1) FN3384-S.SNP.2:4409980 chr02:004409980 0 W/4409980-4409980 FN3384-S SNP T -> A AC=1;AN=184;BQB=0.457007;DP=2654;DP4=1396,1065,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.06016e-06;MQSB=0.880437;RPB=0.866794;SGB=23.2751;VDB=0.885662;EFF=INTRON(MODIFIER||||370|LOC_Os02g08300|protein_coding|CODING|LOC_Os02g08300.1|4|1),INTRON(MODIFIER||||369|LOC_Os02g08300|protein_coding|CODING|LOC_Os02g08300.2|4|1) FN1504-S.SNP.2:4413699 chr02:004413699 0 W/4413699-4413699 FN1504-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN3285-S.SNP.2:4414162 chr02:004414162 0 W/4414162-4414162 FN3285-S SNP A -> T AC=1;AN=184;BQB=0.894579;DP=2262;DP4=1030,1088,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.05195;MQSB=0.704803;RPB=0.558748;SGB=39.699;VDB=0.0934367;EFF=INTRON(MODIFIER||||419|LOC_Os02g08310|protein_coding|CODING|LOC_Os02g08310.1|2|1) FN4312-S.SNP.2:4414448 chr02:004414448 0 W/4414448-4414448 FN4312-S SNP A -> C AC=1;AN=170;BQB=0.782024;DP=2432;DP4=1071,1195,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.03025e-08;MQSB=0.50837;RPB=0.236661;SGB=56.7575;VDB=0.139239;EFF=INTRON(MODIFIER||||419|LOC_Os02g08310|protein_coding|CODING|LOC_Os02g08310.1|1|1) FN922-S.SNP.2:4415319 chr02:004415319 0 W/4415319-4415319 FN922-S Single Base Substitution T-A INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN922-S.SNP.2:4415320 chr02:004415320 0 W/4415320-4415320 FN922-S Single Base Substitution T-A INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN-74.SNP.2:4418193 chr02:004418193 0 W/4418193-4418193 FN-74 Single Base Substitution C-T INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1221-S.SNP.2:4419434 chr02:004419434 0 W/4419434-4419434 FN1221-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1651-S.SNP.2:4429006 chr02:004429006 0 W/4429006-4429006 FN1651-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g08340 transposon protein, putative, unclassified, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN1651-S.SNP.2:4429007 chr02:004429007 0 W/4429007-4429007 FN1651-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g08340 transposon protein, putative, unclassified, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN-339.SNP.2:4434320 chr02:004434320 0 W/4434320-4434320 FN-339 Single Base Substitution C-A INTRON HOMO SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN488-S.SNP.2:4440718 chr02:004440718 0 W/4440718-4440718 FN488-S Single Base Substitution T-G INTRON HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3395-S.SNP.2:4442345 chr02:004442345 0 W/4442345-4442345 FN3395-S SNP A -> G AC=2;AN=184;BQB=0.57621;DP=2823;DP4=1502,1199,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.36679e-18;MQSB=0.998751;RPB=0.998841;SGB=120.271;VDB=0.398328;EFF=INTRON(MODIFIER||||970|LOC_Os02g08360|protein_coding|CODING|LOC_Os02g08360.1|4|1) FN-110.SNP.2:4457128 chr02:004457128 0 W/4457128-4457128 FN-110 Single Base Substitution C-A INTRON HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1071-S.SNP.2:4457439 chr02:004457439 0 W/4457439-4457439 FN1071-S Single Base Substitution G-T INTRON HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1071-S.SNP.2:4457440 chr02:004457440 0 W/4457440-4457440 FN1071-S Single Base Substitution C-T INTRON HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN-202.SNP.2:4461470 chr02:004461470 0 W/4461470-4461470 FN-202 Single Base Substitution C-T INTRON HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN1436-S.SNP.2:4475746 chr02:004475746 0 W/4475746-4475746 FN1436-S Single Base Substitution G-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN881-S.SNP.2:4483994 chr02:004483994 0 W/4483994-4483994 FN881-S Single Base Substitution T-A INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN880-S.SNP.2:4485431 chr02:004485431 0 W/4485431-4485431 FN880-S Single Base Substitution C-A INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1023-S.SNP.2:4494558 chr02:004494558 0 W/4494558-4494558 FN1023-S Single Base Substitution A-G INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3526-S.SNP.2:4495151 chr02:004495151 0 W/4495151-4495151 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.950431;DP=2471;DP4=1221,1200,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000186365;MQSB=0.973224;RPB=0.975071;SGB=30.8063;VDB=0.930513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.2:4495796 chr02:004495796 0 W/4495796-4495796 FN2754-S SNP A -> G AC=1;AN=200;BQB=0.987192;DP=4734;DP4=2221,2249,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97041e-06;MQSB=0.224377;RPB=0.364873;SGB=25.849;VDB=0.515534;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.2:4496147 chr02:004496147 0 W/4496147-4496147 FN2096-S SNP C -> A AC=2;AN=168;BQB=0.648001;DP=4232;DP4=2210,1954,28,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4741e-18;MQSB=0.98555;RPB=0.0508646;SGB=-215.717;VDB=0.771055;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.2:4504653 chr02:004504653 0 W/4504653-4504653 FN1309-S Single Base Substitution G-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1209-S.SNP.2:4504761 chr02:004504761 0 W/4504761-4504761 FN1209-S Single Base Substitution G-A INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2421.SNP.2:4507265 chr02:004507265 0 W/4507265-4507265 FN2421 SNP G -> A AC=1;AN=200;BQB=0.666225;DP=4760;DP4=2484,2019,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53395e-10;MQSB=0.550426;RPB=0.652127;SGB=61.9006;VDB=0.276172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.2:4521986 chr02:004521986 0 W/4521986-4521986 FN2326 SNP G -> A AC=2;AN=192;BQB=0.683598;DP=4784;DP4=2149,2363,29,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.56101e-26;MQSB=0.994389;RPB=0.80865;SGB=222.656;VDB=0.799122;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.2:4523070 chr02:004523070 0 W/4523070-4523070 FN833-S Single Base Substitution A-G INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN2080-S.SNP.2:4527017 chr02:004527017 0 W/4527017-4527017 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.488975;DP=2060;DP4=832,1162,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.77391e-06;MQSB=0.527408;RPB=0.744677;SGB=38.1788;VDB=0.762081;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.2:4527616 chr02:004527616 0 W/4527616-4527616 FN945-S Single Base Substitution G-A INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN1724-S.SNP.2:4531548 chr02:004531548 0 W/4531548-4531548 FN1724-S SNP G -> A AC=1;AN=188;BQB=0.0318753;DP=2950;DP4=938,1968,2,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02167e-08;MQSB=0.744475;RPB=0.756366;SGB=10.1681;VDB=0.716542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.2:4531914 chr02:004531914 0 W/4531914-4531914 FN1460-S Single Base Substitution C-T INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2344.SNP.2:4540175 chr02:004540175 0 W/4540175-4540175 FN2344 SNP T -> A AC=2;AN=192;BQB=0.27078;DP=5067;DP4=2540,2069,26,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.02727e-25;MQSB=0.82303;RPB=0.998524;SGB=76.1861;VDB=0.430207;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.2:4542426 chr02:004542426 0 W/4542426-4542426 FN2606-S SNP T -> G AC=2;AN=198;BQB=0.969485;DP=4395;DP4=1909,2294,7,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.03724e-06;MQSB=0.731872;RPB=0.51028;SGB=16.3688;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.2:4546159 chr02:004546159 0 W/4546159-4546159 FN3562-S SNP T -> A AC=2;AN=188;BQB=0.997805;DP=2622;DP4=1278,1264,10,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.98171e-16;MQSB=0.943989;RPB=0.218852;SGB=108.042;VDB=0.073194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.2:4550979 chr02:004550979 0 W/4550979-4550979 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.969166;DP=4052;DP4=1537,2424,16,17;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.054541;MQB=0.457216;MQSB=3.29518e-23;RPB=0.992864;SGB=105.845;VDB=0.418365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M332I|655|LOC_Os02g08450|protein_coding|CODING|LOC_Os02g08450.1|3|1) FN2630-S.SNP.2:4555648 chr02:004555648 0 W/4555648-4555648 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.525004;DP=4560;DP4=2120,2215,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.64669e-17;MQSB=0.699337;RPB=0.610154;SGB=87.1368;VDB=0.390399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.2:4555649 chr02:004555649 0 W/4555649-4555649 FN2630-S SNP T -> C AC=1;AN=200;BQB=0.833923;DP=4545;DP4=2114,2236,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24453e-17;MQSB=0.689142;RPB=0.669961;SGB=90.7419;VDB=0.594236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.2:4571276 chr02:004571276 0 W/4571276-4571276 FN2163-S SNP G -> A AC=1;AN=168;BQB=0.210774;DP=3801;DP4=1930,1824,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94888e-07;MQSB=0.995708;RPB=0.351317;SGB=9.91396;VDB=0.758048;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R267*|983|LOC_Os02g08490|protein_coding|CODING|LOC_Os02g08490.1|4|1);LOF=(LOC_Os02g08490|LOC_Os02g08490|1|1.00);NMD=(LOC_Os02g08490|LOC_Os02g08490|1|1.00) FN885-S.SNP.2:4578685 chr02:004578685 0 W/4578685-4578685 FN885-S Single Base Substitution C-G INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3678-S.SNP.2:4579282 chr02:004579282 0 W/4579282-4579282 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.234299;DP=3019;DP4=1451,1461,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.77978e-06;MQSB=0.974081;RPB=0.633528;SGB=-0.550503;VDB=0.0119427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.2:4580644 chr02:004580644 0 W/4580644-4580644 FN2080-S SNP A -> G AC=1;AN=168;BQB=0.0116201;DP=4310;DP4=2057,2217,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.45919e-08;MQSB=0.999509;RPB=0.919875;SGB=-145.773;VDB=0.812826;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.2:4581691 chr02:004581691 0 W/4581691-4581691 FN3376-S SNP A -> G AC=1;AN=184;BQB=0.954232;DP=2845;DP4=1369,1399,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.46873e-07;MQSB=0.821683;RPB=0.91342;SGB=39.699;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.2:4591125 chr02:004591125 0 W/4591125-4591125 FN2558-S SNP G -> C AC=1;AN=198;BQB=0.787489;DP=4154;DP4=2218,1730,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.63429e-08;MQSB=0.950347;RPB=0.507244;SGB=32.9588;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.2:4592143 chr02:004592143 0 W/4592143-4592143 FN-102 Single Base Substitution T-C INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN939-S.SNP.2:4592200 chr02:004592200 0 W/4592200-4592200 FN939-S Single Base Substitution A-G INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2278-S.SNP.2:4613166 chr02:004613166 0 W/4613166-4613166 FN2278-S SNP C -> G AC=1;AN=190;BQB=0.889634;DP=4448;DP4=1934,2069,21,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022482;MQB=6.50148e-17;MQSB=0.929471;RPB=0.865647;SGB=32.0809;VDB=0.393167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.2:4614778 chr02:004614778 0 W/4614778-4614778 FN3359-S SNP T -> C AC=1;AN=184;BQB=0.792205;DP=3135;DP4=1343,1621,2,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32015e-05;MQSB=0.963124;RPB=0.233103;SGB=15.7097;VDB=0.686666;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.2:4623953 chr02:004623953 0 W/4623953-4623953 FN861-S Single Base Substitution A-G INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN571-S.SNP.2:4629751 chr02:004629751 0 W/4629751-4629751 FN571-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3858-S.SNP.2:4632130 chr02:004632130 0 W/4632130-4632130 FN3858-S SNP G -> T AC=1;AN=158;BQB=0.987733;DP=2349;DP4=1053,1165,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.483e-07;MQSB=0.871525;RPB=0.863117;SGB=47.0672;VDB=0.304789;EFF=INTRON(MODIFIER||||472|LOC_Os02g09060|protein_coding|CODING|LOC_Os02g09060.1|8|1),INTRON(MODIFIER||||322|LOC_Os02g09060|protein_coding|CODING|LOC_Os02g09060.2|7|1) FN2085-S.SNP.2:4632964 chr02:004632964 0 W/4632964-4632964 FN2085-S SNP A -> T AC=1;AN=168;BQB=0.128588;DP=3974;DP4=1939,1996,10,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.16013e-09;MQSB=0.886296;RPB=0.862872;SGB=-69.6373;VDB=0.673544;EFF=INTRON(MODIFIER||||472|LOC_Os02g09060|protein_coding|CODING|LOC_Os02g09060.1|5|1),INTRON(MODIFIER||||322|LOC_Os02g09060|protein_coding|CODING|LOC_Os02g09060.2|5|1) FN2403.SNP.2:4644522 chr02:004644522 0 W/4644522-4644522 FN2403 SNP G -> T AC=1;AN=200;BQB=0.766846;DP=5221;DP4=2174,2772,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89704e-12;MQSB=0.992004;RPB=0.902056;SGB=58.2954;VDB=0.564119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.2:4648013 chr02:004648013 0 W/4648013-4648013 FN2378 SNP T -> A AC=1;AN=192;BQB=0.795462;DP=5298;DP4=2413,2536,12,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.38325e-17;MQSB=0.613485;RPB=0.426776;SGB=-2.91736;VDB=0.071302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.2:4650923 chr02:004650923 0 W/4650923-4650923 FN2267-S SNP C -> T AC=2;AN=190;BQB=0.824187;DP=3413;DP4=1523,1725,15,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=2.36198e-08;MQSB=0.388468;RPB=0.304901;SGB=108.296;VDB=0.462683;EFF=INTRON(MODIFIER||||541|LOC_Os02g09080|protein_coding|CODING|LOC_Os02g09080.1|2|1) FN1261-S.SNP.2:4653122 chr02:004653122 0 W/4653122-4653122 FN1261-S Single Base Substitution T-C INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3574-S.SNP.2:4659763 chr02:004659763 0 W/4659763-4659763 FN3574-S SNP G -> A AC=1;AN=188;BQB=0.91307;DP=2708;DP4=1264,1374,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39671e-12;MQSB=0.988804;RPB=0.416974;SGB=64.3306;VDB=0.796355;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R940*|1081|LOC_Os02g09100|protein_coding|CODING|LOC_Os02g09100.1|20|1);LOF=(LOC_Os02g09100|LOC_Os02g09100|1|1.00);NMD=(LOC_Os02g09100|LOC_Os02g09100|1|1.00) FN-341.SNP.2:4665209 chr02:004665209 0 W/4665209-4665209 FN-341 Single Base Substitution T-G INTRON HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-98.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN-98 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g09100 isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2386.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN2386 SNP T -> C AC=1;AN=192;BQB=0.105038;DP=4444;DP4=1955,1911,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.19631e-15;MQSB=0.597863;RPB=0.860788;SGB=-42.2982;VDB=0.946054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y33C|1081|LOC_Os02g09100|protein_coding|CODING|LOC_Os02g09100.1|2|1) FN2614-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN2614-S SNP T -> C AC=2;AN=198;BQB=0.735756;DP=4134;DP4=1870,1817,20,33;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.17095e-30;MQSB=0.999233;RPB=0.996753;SGB=65.1786;VDB=0.433636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y33C|1081|LOC_Os02g09100|protein_coding|CODING|LOC_Os02g09100.1|2|1) FN3095-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN3095-S SNP T -> C AC=1;AN=184;BQB=0.981107;DP=2761;DP4=1404,1239,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12248e-10;MQSB=0.930143;RPB=0.56395;SGB=56.8786;VDB=0.576105;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y33C|1081|LOC_Os02g09100|protein_coding|CODING|LOC_Os02g09100.1|2|1) FN3455-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN3455-S SNP T -> C AC=2;AN=184;BQB=0.999991;DP=2794;DP4=1435,1212,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.99183e-13;MQSB=0.996409;RPB=0.606808;SGB=-11.5833;VDB=0.0674891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y33C|1081|LOC_Os02g09100|protein_coding|CODING|LOC_Os02g09100.1|2|1) FN631-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN631-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g09100 isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN702-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN702-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g09100 isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN809-S.SNP.2:4668547 chr02:004668547 0 W/4668547-4668547 FN809-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g09100 isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2650-S.SNP.2:4670248 chr02:004670248 0 W/4670248-4670248 FN2650-S SNP T -> A AC=1;AN=200;BQB=0.0885473;DP=3984;DP4=1814,1508,6,24;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0434237;MQB=0.132814;MQSB=0;RPB=0.0111913;SGB=-282.649;VDB=0.472639;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.2:4676840 chr02:004676840 0 W/4676840-4676840 FN874-S Single Base Substitution G-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN571-S.SNP.2:4681013 chr02:004681013 0 W/4681013-4681013 FN571-S Single Base Substitution C-T INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN4173-S.SNP.2:4681312 chr02:004681312 0 W/4681312-4681312 FN4173-S SNP A -> G AC=1;AN=170;BQB=0.543775;DP=2558;DP4=1312,1176,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.23377e-06;MQSB=0.980761;RPB=0.80926;SGB=34.878;VDB=0.522346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.2:4682606 chr02:004682606 0 W/4682606-4682606 FN1196-S Single Base Substitution C-T INTRON HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN-157.SNP.2:4690683 chr02:004690683 0 W/4690683-4690683 FN-157 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g09140 bfr-2, putative, expressed SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.2:4690684 chr02:004690684 0 W/4690684-4690684 FN-157 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN3282-S.SNP.2:4696779 chr02:004696779 0 W/4696779-4696779 FN3282-S SNP C -> A AC=2;AN=184;BQB=0.842219;DP=2948;DP4=1450,1406,14,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.51239e-15;MQSB=0.770398;RPB=0.752594;SGB=58.5801;VDB=0.999375;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A141S|770|LOC_Os02g09150|protein_coding|CODING|LOC_Os02g09150.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A141S|689|LOC_Os02g09150|protein_coding|CODING|LOC_Os02g09150.2|2|1) FN967-S.SNP.2:4700718 chr02:004700718 0 W/4700718-4700718 FN967-S Single Base Substitution T-G INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN3312-S.SNP.2:4701108 chr02:004701108 0 W/4701108-4701108 FN3312-S SNP T -> A AC=2;AN=184;BQB=0.568997;DP=3288;DP4=1408,1779,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.68077e-17;MQSB=0.959526;RPB=0.419956;SGB=157.265;VDB=0.798162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.2:4702225 chr02:004702225 0 W/4702225-4702225 FN1280-S Single Base Substitution G-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2295.SNP.2:4704403 chr02:004704403 0 W/4704403-4704403 FN2295 SNP C -> T AC=1;AN=192;BQB=0.915342;DP=5118;DP4=2546,2273,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.17945e-15;MQSB=0.845987;RPB=0.560817;SGB=49.4287;VDB=0.42197;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.2:4704681 chr02:004704681 0 W/4704681-4704681 FN3932-S SNP G -> A AC=1;AN=158;BQB=0.981671;DP=2458;DP4=1153,1205,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.88948e-07;MQSB=0.990975;RPB=0.99848;SGB=23.9652;VDB=0.133033;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.2:4709345 chr02:004709345 0 W/4709345-4709345 FN784-S Single Base Substitution T-C INTRON HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2230-S.SNP.2:4724670 chr02:004724670 0 W/4724670-4724670 FN2230-S SNP G -> T AC=1;AN=190;BQB=0.946794;DP=4966;DP4=2442,2129,19,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83346e-17;MQSB=0.996062;RPB=0.967045;SGB=-43.4624;VDB=0.977771;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T403|519|LOC_Os02g09200|protein_coding|CODING|LOC_Os02g09200.1|2|1) FN2230-S.SNP.2:4724689 chr02:004724689 0 W/4724689-4724689 FN2230-S SNP T -> C AC=1;AN=190;BQB=0.540901;DP=4853;DP4=2426,2044,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06313e-17;MQSB=0.987561;RPB=0.828853;SGB=27.4193;VDB=0.977701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y397C|519|LOC_Os02g09200|protein_coding|CODING|LOC_Os02g09200.1|2|1) FN2364.SNP.2:4725433 chr02:004725433 0 W/4725433-4725433 FN2364 SNP C -> A AC=2;AN=192;BQB=0.0148277;DP=4696;DP4=2137,2155,17,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.86339e-20;MQSB=0.975115;RPB=0.861446;SGB=143.146;VDB=0.496077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V195L|519|LOC_Os02g09200|protein_coding|CODING|LOC_Os02g09200.1|1|1) FN2163-S.SNP.2:4727982 chr02:004727982 0 W/4727982-4727982 FN2163-S SNP A -> T AC=1;AN=168;BQB=3.22973e-08;DP=3811;DP4=1806,1869,32,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00209349;MQSB=0.566881;RPB=0.00446736;SGB=-657.698;VDB=0.018452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.2:4730242 chr02:004730242 0 W/4730242-4730242 FN2165-S SNP T -> A AC=1;AN=168;BQB=0.107562;DP=3270;DP4=1708,1518,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.08742e-08;MQSB=0.998017;RPB=0.907721;SGB=-36.659;VDB=0.291028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H83Q|108|LOC_Os02g09210|protein_coding|CODING|LOC_Os02g09210.1|1|1) FN967-S.SNP.2:4739015 chr02:004739015 0 W/4739015-4739015 FN967-S Single Base Substitution A-G INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN1233-S.SNP.2:4747972 chr02:004747972 0 W/4747972-4747972 FN1233-S Single Base Substitution T-A INTRON HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1233-S.SNP.2:4747973 chr02:004747973 0 W/4747973-4747973 FN1233-S Single Base Substitution G-A INTRON HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1204-S.SNP.2:4756866 chr02:004756866 0 W/4756866-4756866 FN1204-S Single Base Substitution T-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN3883-S.SNP.2:4757189 chr02:004757189 0 W/4757189-4757189 FN3883-S SNP T -> G AC=2;AN=158;BQB=0.996112;DP=2778;DP4=1414,1271,17,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.41223e-16;MQSB=0.909915;RPB=0.826517;SGB=121.348;VDB=0.128783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN-103 Single Base Substitution G-C INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN1217-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN1217-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1292-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN1292-S Single Base Substitution G-C INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1701-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN1701-S SNP G -> C AC=1;AN=186;BQB=1.34615e-05;DP=3830;DP4=1699,2076,11,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.0773354;MQSB=0.847792;RPB=0.462155;SGB=-224.044;VDB=0.819538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN2353 SNP G -> C AC=2;AN=192;BQB=0.682663;DP=5005;DP4=2288,2145,25,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.6698e-19;MQSB=0.0395557;RPB=0.613873;SGB=128.889;VDB=0.806733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN3385-S SNP G -> C AC=2;AN=184;BQB=0.997398;DP=2775;DP4=1331,1177,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.07173e-14;MQSB=0.991418;RPB=0.514706;SGB=95.6183;VDB=0.417792;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN484-S Single Base Substitution G-C INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN902-S.SNP.2:4760785 chr02:004760785 0 W/4760785-4760785 FN902-S Single Base Substitution G-C INTERGENIC HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN4080-S.SNP.2:4761562 chr02:004761562 0 W/4761562-4761562 FN4080-S SNP A -> G AC=1;AN=182;BQB=0.32051;DP=3085;DP4=1556,1347,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000453923;MQSB=0.879959;RPB=0.936849;SGB=28.606;VDB=0.737713;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.2:4762589 chr02:004762589 0 W/4762589-4762589 W22-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1243-S.SNP.2:4766307 chr02:004766307 0 W/4766307-4766307 FN1243-S Single Base Substitution T-C INTRON HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN989-S.SNP.2:4776663 chr02:004776663 0 W/4776663-4776663 FN989-S Single Base Substitution A-G INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2735-S.SNP.2:4780196 chr02:004780196 0 W/4780196-4780196 FN2735-S SNP C -> A AC=1;AN=200;BQB=0.395361;DP=5463;DP4=2714,2420,7,9;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.159253;MQB=0.0484804;MQSB=8.40668e-05;RPB=0.0556666;SGB=47.4799;VDB=0.0103125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V26L|180|LOC_Os02g09280|protein_coding|CODING|LOC_Os02g09280.1|1|1) FN3568-S.SNP.2:4782674 chr02:004782674 0 W/4782674-4782674 FN3568-S SNP T -> A AC=1;AN=188;BQB=0.72421;DP=3644;DP4=1856,1718,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0219539;MQB=0.255541;MQSB=0.0216666;RPB=0.474717;SGB=44.4357;VDB=0.692875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.2:4790469 chr02:004790469 0 W/4790469-4790469 FN2183-S SNP T -> A AC=1;AN=190;BQB=0.314425;DP=4859;DP4=2260,2106,16,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205804;MQB=2.65355e-21;MQSB=0.747621;RPB=0.367962;SGB=87.5066;VDB=0.841513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.2:4796654 chr02:004796654 0 W/4796654-4796654 FN1071-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3838-S.SNP.2:4798057 chr02:004798057 0 W/4798057-4798057 FN3838-S SNP A -> G AC=1;AN=190;BQB=0.933785;DP=2623;DP4=1276,1261,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.45292e-07;MQSB=0.947315;RPB=0.0880926;SGB=15.9981;VDB=0.0572236;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.2:4801633 chr02:004801633 0 W/4801633-4801633 FN-399 Single Base Substitution A-G INTRON HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.2:4801633 chr02:004801633 0 W/4801633-4801633 FN399-S Single Base Substitution A-G INTRON HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN891-S.SNP.2:4802991 chr02:004802991 0 W/4802991-4802991 FN891-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN587-S.SNP.2:4804201 chr02:004804201 0 W/4804201-4804201 FN587-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os02g09340 expressed protein SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2453.SNP.2:4806328 chr02:004806328 0 W/4806328-4806328 FN2453 SNP G -> A AC=1;AN=200;BQB=0.00600132;DP=2267;DP4=1820,330,9,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000441112;MQB=0.019603;MQSB=0.156237;RPB=0.329381;SGB=40.4492;VDB=0.133966;EFF=UTR_5_PRIME(MODIFIER||5||763|LOC_Os02g09340|protein_coding|CODING|LOC_Os02g09340.1|1|1) FN2702-S.SNP.2:4808247 chr02:004808247 0 W/4808247-4808247 FN2702-S SNP C -> G AC=1;AN=200;BQB=0.241736;DP=4581;DP4=2515,1820,15,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39401e-06;MQSB=0.825986;RPB=0.912056;SGB=51.0851;VDB=0.820136;EFF=UTR_3_PRIME(MODIFIER||261||377|LOC_Os02g09359|protein_coding|CODING|LOC_Os02g09359.1|4|1) FN-158.SNP.2:4811068 chr02:004811068 0 W/4811068-4811068 FN-158 Single Base Substitution C-G INTRON HOMO SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-290.SNP.2:4811068 chr02:004811068 0 W/4811068-4811068 FN-290 Single Base Substitution C-G INTRON HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1350-S.SNP.2:4811981 chr02:004811981 0 W/4811981-4811981 FN1350-S Single Base Substitution G-A INTRON HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN3287-S.SNP.2:4821227 chr02:004821227 0 W/4821227-4821227 FN3287-S SNP A -> C AC=2;AN=184;BQB=0.97094;DP=3027;DP4=1365,1523,21,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.84466e-25;MQSB=0.998833;RPB=0.985319;SGB=49.4124;VDB=0.796898;EFF=INTRON(MODIFIER||||260|LOC_Os02g09380|protein_coding|CODING|LOC_Os02g09380.1|2|1) FN874-S.SNP.2:4823894 chr02:004823894 0 W/4823894-4823894 FN874-S Single Base Substitution G-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN-232.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN-232 Single Base Substitution T-A INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1034-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN1034-S Single Base Substitution T-A INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN1290-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN1290-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1336-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN1336-S Single Base Substitution T-A INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2179-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2179-S SNP T -> A AC=2;AN=168;BQB=0.977824;DP=3400;DP4=1014,2293,11,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.75943e-14;MQSB=0.862832;RPB=0.998457;SGB=-11.0644;VDB=0.470115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2244-S SNP T -> A AC=1;AN=190;BQB=0.535341;DP=4377;DP4=1640,2505,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31629e-09;MQSB=0.601988;RPB=0.910859;SGB=-35.4322;VDB=0.712842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2374 SNP T -> A AC=2;AN=192;BQB=0.963514;DP=4826;DP4=2000,2566,8,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.50872e-19;MQSB=0.999508;RPB=0.800316;SGB=33.9487;VDB=0.335305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2451 SNP T -> A AC=1;AN=200;BQB=0.811927;DP=4369;DP4=1667,2445,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43957e-12;MQSB=0.699328;RPB=0.889309;SGB=17.5158;VDB=0.0770116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2587-S SNP T -> A AC=1;AN=198;BQB=0.809288;DP=4202;DP4=1734,2249,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.94581e-11;MQSB=0.571056;RPB=0.402226;SGB=44.9151;VDB=0.132441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN2628-S SNP T -> A AC=2;AN=200;BQB=0.975743;DP=4894;DP4=2076,2571,19,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.44403e-24;MQSB=0.684278;RPB=0.916472;SGB=2.62419;VDB=0.233964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN3492-S SNP T -> A AC=2;AN=184;BQB=0.971822;DP=2992;DP4=1304,1544,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.13654e-14;MQSB=0.865763;RPB=0.82656;SGB=61.1019;VDB=0.51955;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN743-S Single Base Substitution T-A INTERGENIC HOMO SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN833-S.SNP.2:4831052 chr02:004831052 0 W/4831052-4831052 FN833-S Single Base Substitution T-A INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN984-S.SNP.2:4837346 chr02:004837346 0 W/4837346-4837346 FN984-S Single Base Substitution T-G INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1368-S.SNP.2:4843656 chr02:004843656 0 W/4843656-4843656 FN1368-S Single Base Substitution A-C INTRON HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. W470-2-1.SNP.2:4847279 chr02:004847279 0 W/4847279-4847279 W470-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3667-S.SNP.2:4849583 chr02:004849583 0 W/4849583-4849583 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.939061;DP=3367;DP4=1825,1444,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.98776e-07;MQSB=0.998899;RPB=0.948917;SGB=39.9877;VDB=0.705725;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V533|767|LOC_Os02g09450|protein_coding|CODING|LOC_Os02g09450.1|9|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V533|731|LOC_Os02g09450|protein_coding|CODING|LOC_Os02g09450.3|9|1) FN3774-S.SNP.2:4855091 chr02:004855091 0 W/4855091-4855091 FN3774-S SNP G -> A AC=1;AN=190;BQB=0.126504;DP=2409;DP4=1203,1126,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.01407e-07;MQSB=0.994209;RPB=0.935326;SGB=46.7622;VDB=0.923849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.2:4855145 chr02:004855145 0 W/4855145-4855145 FN3901-S SNP T -> C AC=2;AN=158;BQB=0.786644;DP=2041;DP4=1030,919,13,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.44755e-12;MQSB=0.945218;RPB=0.948175;SGB=90.7616;VDB=0.19667;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.2:4859018 chr02:004859018 0 W/4859018-4859018 FN355-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN449-S.SNP.2:4862115 chr02:004862115 0 W/4862115-4862115 FN449-S Single Base Substitution T-C INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN502-S.SNP.2:4862115 chr02:004862115 0 W/4862115-4862115 FN502-S Single Base Substitution T-G INTRON HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2426.SNP.2:4866184 chr02:004866184 0 W/4866184-4866184 FN2426 SNP C -> A AC=1;AN=200;BQB=0.628491;DP=3110;DP4=1845,999,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68005e-06;MQSB=0.333236;RPB=0.994223;SGB=25.849;VDB=0.879552;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.2:4867963 chr02:004867963 0 W/4867963-4867963 FN3675-S SNP T -> A AC=1;AN=190;BQB=0.995223;DP=2069;DP4=752,1185,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99901e-07;MQSB=0.829756;RPB=0.19835;SGB=36.1006;VDB=0.07625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L75H|301|LOC_Os02g09480|protein_coding|CODING|LOC_Os02g09480.1|1|1) FN775-S.SNP.2:4869234 chr02:004869234 0 W/4869234-4869234 FN775-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN1373-S.SNP.2:4870390 chr02:004870390 0 W/4870390-4870390 FN1373-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g09490 dehydrogenase, putative, expressed SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3606-S.SNP.2:4871756 chr02:004871756 0 W/4871756-4871756 FN3606-S SNP A -> C AC=1;AN=190;BQB=1;DP=2979;DP4=1438,1401,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61208e-08;MQSB=0.934271;RPB=0.800237;SGB=62.7569;VDB=0.159629;EFF=INTRON(MODIFIER||||363|LOC_Os02g09490|protein_coding|CODING|LOC_Os02g09490.1|3|1) FN2438.SNP.2:4872712 chr02:004872712 0 W/4872712-4872712 FN2438 SNP T -> A AC=1;AN=200;BQB=0.977761;DP=5300;DP4=2543,2380,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56063e-13;MQSB=0.996089;RPB=0.48584;SGB=20.7261;VDB=0.903539;EFF=INTRON(MODIFIER||||363|LOC_Os02g09490|protein_coding|CODING|LOC_Os02g09490.1|2|1) FN3701-S.SNP.2:4876536 chr02:004876536 0 W/4876536-4876536 FN3701-S SNP A -> C AC=1;AN=190;BQB=0.824898;DP=2964;DP4=1574,1248,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.91579e-05;MQSB=0.720808;RPB=0.630956;SGB=44.5415;VDB=0.608538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.2:4880312 chr02:004880312 0 W/4880312-4880312 FN3955-S SNP T -> A AC=1;AN=168;BQB=0.987292;DP=2480;DP4=1157,1206,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.484e-07;MQSB=0.999989;RPB=0.997192;SGB=19.7539;VDB=0.622511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.2:4897874 chr02:004897874 0 W/4897874-4897874 FN2202-S SNP A -> G AC=1;AN=190;BQB=0.961042;DP=5280;DP4=2765,2140,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.89255e-16;MQSB=0.974917;RPB=0.869577;SGB=82.301;VDB=0.573531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.2:4898021 chr02:004898021 0 W/4898021-4898021 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.826935;DP=2577;DP4=1247,1200,12,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.90971e-20;MQSB=0.779305;RPB=0.395739;SGB=139.178;VDB=0.0531351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.2:4898817 chr02:004898817 0 W/4898817-4898817 FN2618-S SNP A -> G AC=1;AN=198;BQB=0.468527;DP=4430;DP4=2297,1892,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61848e-12;MQSB=0.982658;RPB=0.124122;SGB=86.3098;VDB=0.21378;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.2:4913807 chr02:004913807 0 W/4913807-4913807 FN452-S Single Base Substitution T-A INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN2629-S.SNP.2:4918815 chr02:004918815 0 W/4918815-4918815 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.930773;DP=4554;DP4=2078,2212,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219587;MQB=6.44725e-10;MQSB=0.903165;RPB=0.748439;SGB=58.2954;VDB=0.439679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1021V|1872|LOC_Os02g09550|protein_coding|CODING|LOC_Os02g09550.1|3|1) FN2387.SNP.2:4925482 chr02:004925482 0 W/4925482-4925482 FN2387 SNP C -> T AC=1;AN=192;BQB=0.0925453;DP=5072;DP4=2317,2461,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00295741;MQB=0.0412339;MQSB=2.10273e-05;RPB=0.983199;SGB=36.607;VDB=0.784858;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.2:4926268 chr02:004926268 0 W/4926268-4926268 FN1614-S Single Base Substitution C-A INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3759-S.SNP.2:4926913 chr02:004926913 0 W/4926913-4926913 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.998242;DP=2938;DP4=1560,1289,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0105514;MQB=6.43132e-05;MQSB=3.99207e-17;RPB=0.630389;SGB=62.7569;VDB=0.448688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.2:4939644 chr02:004939644 0 W/4939644-4939644 FN2326 SNP T -> A AC=1;AN=192;BQB=0.997255;DP=5095;DP4=2462,2370,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.53191e-11;MQSB=0.97269;RPB=0.862525;SGB=61.1661;VDB=0.920182;EFF=INTRON(MODIFIER||||115|LOC_Os02g09600|protein_coding|CODING|LOC_Os02g09600.1|3|1),INTRON(MODIFIER||||107|LOC_Os02g09600|protein_coding|CODING|LOC_Os02g09600.3|2|1),INTRON(MODIFIER||||115|LOC_Os02g09600|protein_coding|CODING|LOC_Os02g09600.2|3|1) FN1228-S.SNP.2:4948860 chr02:004948860 0 W/4948860-4948860 FN1228-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2713-S.SNP.2:4950778 chr02:004950778 0 W/4950778-4950778 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.857549;DP=3867;DP4=1764,1809,15,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.81226e-10;MQSB=0.0400571;RPB=0.352402;SGB=79.9264;VDB=0.0762601;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P9L|292|LOC_Os02g09630|protein_coding|CODING|LOC_Os02g09630.1|2|1) FN3362-S.SNP.2:4952747 chr02:004952747 0 W/4952747-4952747 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.980361;DP=3022;DP4=1486,1450,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17368e-10;MQSB=0.991646;RPB=0.241535;SGB=53.3568;VDB=0.0356229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.2:4958334 chr02:004958334 0 W/4958334-4958334 FN2432 SNP G -> A AC=1;AN=200;BQB=0.984542;DP=5165;DP4=2591,2285,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10148e-12;MQSB=0.958861;RPB=0.371474;SGB=-10.0844;VDB=0.744061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:4963963 chr02:004963963 0 W/4963963-4963963 FN2583-S SNP A -> T AC=2;AN=200;BQB=0.985175;DP=5120;DP4=2687,2186,28,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.98339e-27;MQSB=0.794746;RPB=0.960568;SGB=107.64;VDB=0.200515;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.2:4973020 chr02:004973020 0 W/4973020-4973020 FN672-S Single Base Substitution C-T INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2685-S.SNP.2:4980164 chr02:004980164 0 W/4980164-4980164 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.681669;DP=4842;DP4=2316,2214,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206526;MQB=2.24937e-07;MQSB=0.968614;RPB=0.999367;SGB=29.4541;VDB=0.979495;EFF=INTRON(MODIFIER||||134|LOC_Os02g09690|protein_coding|CODING|LOC_Os02g09690.1|2|1) FN3395-S.SNP.2:4984085 chr02:004984085 0 W/4984085-4984085 FN3395-S SNP G -> T AC=1;AN=184;BQB=0.243016;DP=3376;DP4=1867,1387,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08106e-09;MQSB=0.998675;RPB=0.997878;SGB=-38.1432;VDB=0.22046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R29S|134|LOC_Os02g09690|protein_coding|CODING|LOC_Os02g09690.1|4|1) FN3902-S.SNP.2:5001701 chr02:005001701 0 W/5001701-5001701 FN3902-S SNP T -> A AC=1;AN=158;BQB=0.976405;DP=2163;DP4=1083,1014,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.75947e-07;MQSB=0.827234;RPB=0.381427;SGB=42.6978;VDB=0.327767;EFF=INTERGENIC(MODIFIER||||||||||1) FN1350-S.SNP.2:5004523 chr02:005004523 0 W/5004523-5004523 FN1350-S Single Base Substitution C-A INTERGENIC HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN4272-S.SNP.2:5035683 chr02:005035683 0 W/5035683-5035683 FN4272-S SNP C -> G AC=1;AN=170;BQB=0.741242;DP=2524;DP4=1433,992,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.4796e-08;MQSB=0.993987;RPB=0.824535;SGB=45.206;VDB=0.0863624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.2:5039571 chr02:005039571 0 W/5039571-5039571 FN2677-S SNP T -> A AC=1;AN=200;BQB=0.542604;DP=4864;DP4=2250,2397,14,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.69205e-19;MQSB=0.972881;RPB=0.853826;SGB=112.373;VDB=0.577064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N301Y|389|LOC_Os02g09770|protein_coding|CODING|LOC_Os02g09770.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N233Y|321|LOC_Os02g09770|protein_coding|CODING|LOC_Os02g09770.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N233Y|321|LOC_Os02g09770|protein_coding|CODING|LOC_Os02g09770.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N233Y|321|LOC_Os02g09770|protein_coding|CODING|LOC_Os02g09770.4|5|1) FN1234-S.SNP.2:5039916 chr02:005039916 0 W/5039916-5039916 FN1234-S Single Base Substitution C-T INTRON HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN464-S.SNP.2:5056497 chr02:005056497 0 W/5056497-5056497 FN464-S Single Base Substitution T-C INTRON HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN703-S.SNP.2:5062215 chr02:005062215 0 W/5062215-5062215 FN703-S Single Base Substitution A-T INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2196-S.SNP.2:5062641 chr02:005062641 0 W/5062641-5062641 FN2196-S SNP A -> T AC=1;AN=190;BQB=0.118117;DP=3927;DP4=1921,1611,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46035e-10;MQSB=0.571485;RPB=0.243854;SGB=-114.309;VDB=0.254687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.2:5065123 chr02:005065123 0 W/5065123-5065123 FN2445 SNP C -> G AC=1;AN=200;BQB=0.844006;DP=4686;DP4=2209,2151,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14199e-08;MQSB=0.996092;RPB=0.891803;SGB=34.6953;VDB=0.554614;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R332G|375|LOC_Os02g09820|protein_coding|CODING|LOC_Os02g09820.1|1|1) FN3372-S.SNP.2:5069361 chr02:005069361 0 W/5069361-5069361 FN3372-S SNP A -> T AC=1;AN=184;BQB=0.582742;DP=2588;DP4=1145,1330,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92281e-08;MQSB=0.858439;RPB=0.998127;SGB=-15.7576;VDB=0.765375;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.2:5087257 chr02:005087257 0 W/5087257-5087257 FN402-S Single Base Substitution C-T INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN1120-S.SNP.2:5094741 chr02:005094741 0 W/5094741-5094741 FN1120-S Single Base Substitution G-A INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1254-S.SNP.2:5099408 chr02:005099408 0 W/5099408-5099408 FN1254-S Single Base Substitution C-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1163-S.SNP.2:5104092 chr02:005104092 0 W/5104092-5104092 FN1163-S Single Base Substitution T-A INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3692-S.SNP.2:5107204 chr02:005107204 0 W/5107204-5107204 FN3692-S SNP T -> C AC=1;AN=190;BQB=0.999251;DP=2913;DP4=1568,1179,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46421e-07;MQSB=0.835645;RPB=0.892027;SGB=28.9929;VDB=0.0296961;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.2:5110046 chr02:005110046 0 W/5110046-5110046 FN941-S Single Base Substitution C-T INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2185-S.SNP.2:5122281 chr02:005122281 0 W/5122281-5122281 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.92175;DP=4456;DP4=1927,2163,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.2603e-11;MQSB=0.880405;RPB=0.357675;SGB=36.4291;VDB=0.280348;EFF=INTRON(MODIFIER||||720|LOC_Os02g09900|protein_coding|CODING|LOC_Os02g09900.1|1|1) FN4241-S.SNP.2:5135769 chr02:005135769 0 W/5135769-5135769 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.837648;DP=2644;DP4=1419,1141,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.60555e-07;MQSB=0.983584;RPB=0.805473;SGB=61.2001;VDB=0.994664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.2:5177504 chr02:005177504 0 W/5177504-5177504 FN1124-S Single Base Substitution G-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3450-S.SNP.2:5179060 chr02:005179060 0 W/5179060-5179060 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.969661;DP=2957;DP4=1182,1681,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.7648e-07;MQSB=0.961124;RPB=0.363168;SGB=25.1826;VDB=0.131182;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.2:5183514 chr02:005183514 0 W/5183514-5183514 FN2454 SNP G -> A AC=1;AN=200;BQB=0.862088;DP=4810;DP4=2224,2308,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.01452e-06;MQSB=0.2714;RPB=0.279492;SGB=45.0543;VDB=0.056073;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.2:5192179 chr02:005192179 0 W/5192179-5192179 FN-304 Single Base Substitution A-G INTERGENIC HOMO SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN502-S.SNP.2:5196003 chr02:005196003 0 W/5196003-5196003 FN502-S Single Base Substitution T-A INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2588-S.SNP.2:5208487 chr02:005208487 0 W/5208487-5208487 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.858595;DP=4334;DP4=1632,2428,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.57362e-08;MQSB=0.505198;RPB=0.468788;SGB=21.559;VDB=0.669416;EFF=UTR_3_PRIME(MODIFIER||24||146|LOC_Os02g10010|protein_coding|CODING|LOC_Os02g10010.1|1|1),UTR_3_PRIME(MODIFIER||24||146|LOC_Os02g10010|protein_coding|CODING|LOC_Os02g10010.2|2|1) FN2588-S.SNP.2:5208488 chr02:005208488 0 W/5208488-5208488 FN2588-S SNP T -> A AC=1;AN=198;BQB=0.996463;DP=4350;DP4=1586,2448,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.49946e-08;MQSB=0.585463;RPB=0.911882;SGB=58.7391;VDB=0.630944;EFF=UTR_3_PRIME(MODIFIER||25||146|LOC_Os02g10010|protein_coding|CODING|LOC_Os02g10010.1|1|1),UTR_3_PRIME(MODIFIER||25||146|LOC_Os02g10010|protein_coding|CODING|LOC_Os02g10010.2|2|1) FN3701-S.SNP.2:5214038 chr02:005214038 0 W/5214038-5214038 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.0511224;DP=3402;DP4=1764,1368,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.09336e-07;MQSB=2.68919e-07;RPB=0.510497;SGB=-39.4473;VDB=0.829791;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.2:5221127 chr02:005221127 0 W/5221127-5221127 FN-341 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1546-S.SNP.2:5235125 chr02:005235125 0 W/5235125-5235125 FN1546-S Single Base Substitution T-C INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN2682-S.SNP.2:5240006 chr02:005240006 0 W/5240006-5240006 FN2682-S SNP G -> A AC=1;AN=200;BQB=0.52746;DP=5161;DP4=2650,2299,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.47262e-13;MQSB=0.976331;RPB=0.740593;SGB=86.5007;VDB=0.17411;EFF=INTRON(MODIFIER||||511|LOC_Os02g10060|protein_coding|CODING|LOC_Os02g10060.1|2|1) 705-1.SNP.2:5251996 chr02:005251996 0 W/5251996-5251996 705-1 Single Base Substitution C-A INTRON Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. FN3446-S.SNP.2:5265976 chr02:005265976 0 W/5265976-5265976 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.901354;DP=3032;DP4=1393,1543,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.54878e-06;MQSB=0.378813;RPB=0.908353;SGB=57.786;VDB=0.744116;EFF=INTRON(MODIFIER||||1413|LOC_Os02g10100|protein_coding|CODING|LOC_Os02g10100.1|1|1) FN3933-S.SNP.2:5267425 chr02:005267425 0 W/5267425-5267425 FN3933-S SNP A -> G AC=1;AN=158;BQB=0.734235;DP=5039;DP4=2784,1957,19,11;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.0577496;MQB=0.967061;MQSB=0.720788;RPB=0.349059;SGB=-11.7352;VDB=0.25877;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.2:5279569 chr02:005279569 0 W/5279569-5279569 FN2082-S SNP A -> T AC=1;AN=168;BQB=0.905456;DP=3368;DP4=1379,1960,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.60019e-09;MQSB=0.998291;RPB=0.807215;SGB=48.4712;VDB=0.24284;EFF=INTRON(MODIFIER||||926|LOC_Os02g10120|protein_coding|CODING|LOC_Os02g10120.1|5|1) FN1366-S.SNP.2:5283200 chr02:005283200 0 W/5283200-5283200 FN1366-S Single Base Substitution T-G INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3412-S.SNP.2:5290732 chr02:005290732 0 W/5290732-5290732 FN3412-S SNP T -> C AC=1;AN=184;BQB=0.670897;DP=2720;DP4=1475,1162,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.53944e-06;MQSB=0.994067;RPB=0.768022;SGB=5.62295;VDB=0.55693;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.2:5296900 chr02:005296900 0 W/5296900-5296900 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.48696;DP=4768;DP4=2188,2265,24,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26627e-19;MQSB=0.540847;RPB=0.995063;SGB=117.84;VDB=0.17309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:5298881 chr02:005298881 0 W/5298881-5298881 FN3848-S SNP A -> G AC=1;AN=158;BQB=0.856168;DP=2655;DP4=1166,1365,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.13266e-09;MQSB=0.898502;RPB=0.99907;SGB=82.0227;VDB=0.119475;EFF=INTRON(MODIFIER||||579|LOC_Os02g10130|protein_coding|CODING|LOC_Os02g10130.1|8|1) FN3550-S.SNP.2:5299693 chr02:005299693 0 W/5299693-5299693 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.980593;DP=2717;DP4=1363,1281,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.33758e-09;MQSB=0.947604;RPB=0.935419;SGB=58.0655;VDB=0.135972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R540Q|579|LOC_Os02g10130|protein_coding|CODING|LOC_Os02g10130.1|8|1) FN1415-S.SNP.2:5300373 chr02:005300373 0 W/5300373-5300373 FN1415-S Single Base Substitution A-G INTRON Homo SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3425-S.SNP.2:5308526 chr02:005308526 0 W/5308526-5308526 FN3425-S SNP A -> T AC=1;AN=184;BQB=0.99711;DP=2722;DP4=1390,1208,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.78571e-08;MQSB=0.923938;RPB=0.741354;SGB=66.8296;VDB=0.861521;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.2:5311527 chr02:005311527 0 W/5311527-5311527 FN1309-S Single Base Substitution T-G INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN680-S.SNP.2:5317791 chr02:005317791 0 W/5317791-5317791 FN680-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g10140 bZIP transcription factor domain containing protein, expressed SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1327-S.SNP.2:5318590 chr02:005318590 0 W/5318590-5318590 FN1327-S Single Base Substitution C-A INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2655-S.SNP.2:5321773 chr02:005321773 0 W/5321773-5321773 FN2655-S SNP T -> C AC=1;AN=200;BQB=0.905055;DP=5550;DP4=3060,2211,20,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08026e-16;MQSB=0.688497;RPB=0.998495;SGB=127.947;VDB=0.587627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.2:5322878 chr02:005322878 0 W/5322878-5322878 FN2207-S SNP T -> A AC=2;AN=190;BQB=0.948676;DP=4841;DP4=2369,2118,25,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.11177e-20;MQSB=0.868197;RPB=0.946854;SGB=185.712;VDB=0.947578;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.2:5327161 chr02:005327161 0 W/5327161-5327161 FN3701-S SNP A -> T AC=1;AN=190;BQB=0.880897;DP=2861;DP4=1257,1381,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.73583e-07;MQSB=0.97761;RPB=0.226303;SGB=-14.8836;VDB=0.359376;EFF=UTR_5_PRIME(MODIFIER||10||366|LOC_Os02g10160|protein_coding|CODING|LOC_Os02g10160.1|2|1) W591-4-1.SNP.2:5329743 chr02:005329743 0 W/5329743-5329743 W591-4-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g10170 expressed protein SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1688-S.SNP.2:5358135 chr02:005358135 0 W/5358135-5358135 FN1688-S SNP C -> T AC=1;AN=188;BQB=0.290862;DP=3724;DP4=2075,1604,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.61856e-07;MQSB=0.99897;RPB=0.571078;SGB=-107.522;VDB=0.870411;EFF=INTRON(MODIFIER||||276|LOC_Os02g10230|protein_coding|CODING|LOC_Os02g10230.1|1|1) FN4325-S.SNP.2:5366959 chr02:005366959 0 W/5366959-5366959 FN4325-S SNP T -> G AC=2;AN=170;BQB=0.411222;DP=881;DP4=6,842,0,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=0.000363573;MQSB=0.133895;RPB=0.702214;SGB=43.4296;VDB=0.54107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.2:5384990 chr02:005384990 0 W/5384990-5384990 FN2348 SNP G -> A AC=1;AN=192;BQB=0.291235;DP=4700;DP4=2229,2151,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0131915;MQB=0.000304821;MQSB=2.03152e-15;RPB=0.663188;SGB=50.4731;VDB=0.372202;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E164|1789|LOC_Os02g10270|protein_coding|CODING|LOC_Os02g10270.1|1|1) FN3095-S.SNP.2:5391343 chr02:005391343 0 W/5391343-5391343 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.967857;DP=3101;DP4=1527,1484,17,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00193486;MQB=7.17245e-13;MQSB=0.536768;RPB=0.74618;SGB=103.004;VDB=0.0987717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1364H|1789|LOC_Os02g10270|protein_coding|CODING|LOC_Os02g10270.1|5|1) FN2113-S.SNP.2:5391481 chr02:005391481 0 W/5391481-5391481 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.867387;DP=2736;DP4=1598,1098,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0153509;MQB=0.000429042;MQSB=0.116669;RPB=0.329844;SGB=39.2004;VDB=0.365777;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S1410I|1789|LOC_Os02g10270|protein_coding|CODING|LOC_Os02g10270.1|5|1) FN2447.SNP.2:5394411 chr02:005394411 0 W/5394411-5394411 FN2447 SNP G -> A AC=1;AN=200;BQB=0.262055;DP=3557;DP4=1844,1431,7,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000843407;MQB=0.000279609;MQSB=0.365815;RPB=0.543373;SGB=58.8698;VDB=0.223026;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.2:5394698 chr02:005394698 0 W/5394698-5394698 W470-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. W7-1-1.SNP.2:5396308 chr02:005396308 0 W/5396308-5396308 W7-1-1 Single Base Substitution A-G INTRON HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2447.SNP.2:5398017 chr02:005398017 0 W/5398017-5398017 FN2447 SNP T -> A AC=1;AN=200;BQB=0.910579;DP=4448;DP4=2378,1717,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.03706e-15;MQSB=0.827601;RPB=0.756602;SGB=-40.0535;VDB=0.0263293;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E141V|443|LOC_Os02g10280|protein_coding|CODING|LOC_Os02g10280.1|4|1) FN2447.SNP.2:5398018 chr02:005398018 0 W/5398018-5398018 FN2447 SNP C -> A AC=1;AN=200;BQB=0.991619;DP=4458;DP4=2361,1778,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82294e-16;MQSB=0.876415;RPB=0.986352;SGB=109.527;VDB=0.0884577;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E141*|443|LOC_Os02g10280|protein_coding|CODING|LOC_Os02g10280.1|4|1);LOF=(LOC_Os02g10280|LOC_Os02g10280|1|1.00);NMD=(LOC_Os02g10280|LOC_Os02g10280|1|1.00) FN2455.SNP.2:5414288 chr02:005414288 0 W/5414288-5414288 FN2455 SNP C -> T AC=1;AN=200;BQB=0.197477;DP=5197;DP4=2161,2659,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.72414e-11;MQSB=0.423158;RPB=0.997463;SGB=-11.2947;VDB=0.730628;EFF=UTR_3_PRIME(MODIFIER||567||449|LOC_Os02g10300|protein_coding|CODING|LOC_Os02g10300.1|3|1) FN-103.SNP.2:5416327 chr02:005416327 0 W/5416327-5416327 FN-103 Single Base Substitution T-A INTRON HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN_829-2-5.SNP.2:5423987 chr02:005423987 0 W/5423987-5423987 FN_829-2-5 Single Base Substitution T-C Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2665-S.SNP.2:5425094 chr02:005425094 0 W/5425094-5425094 FN2665-S SNP A -> G AC=2;AN=200;BQB=0.922841;DP=5007;DP4=2466,2355,22,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00019972;MQB=8.99584e-25;MQSB=0.992422;RPB=0.965645;SGB=141.214;VDB=0.368571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.2:5430508 chr02:005430508 0 W/5430508-5430508 FN3341-S SNP G -> T AC=1;AN=184;BQB=0.999407;DP=3631;DP4=1620,1930,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17027e-10;MQSB=0.795314;RPB=0.533586;SGB=46.3132;VDB=0.5;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L259|586|LOC_Os02g10330|protein_coding|CODING|LOC_Os02g10330.1|7|1) FN2141-S.SNP.2:5432616 chr02:005432616 0 W/5432616-5432616 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.422026;DP=2770;DP4=1314,1421,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000361011;MQB=1.64694e-09;MQSB=0.0717458;RPB=0.118196;SGB=5.62151;VDB=0.0805448;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y1703|1738|LOC_Os02g10340|protein_coding|CODING|LOC_Os02g10340.1|5|1) FN3446-S.SNP.2:5433651 chr02:005433651 0 W/5433651-5433651 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.474428;DP=3580;DP4=1727,1774,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00251397;MQB=2.85848e-07;MQSB=0.574746;RPB=0.786359;SGB=84.9167;VDB=0.872591;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y1444*|1738|LOC_Os02g10340|protein_coding|CODING|LOC_Os02g10340.1|4|1) FN935-S.SNP.2:5437018 chr02:005437018 0 W/5437018-5437018 FN935-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g10340 retrotransposon protein, putative, unclassified, expressed SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN3416-S.SNP.2:5450831 chr02:005450831 0 W/5450831-5450831 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.942578;DP=2757;DP4=1361,1328,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23694e-09;MQSB=0.999993;RPB=0.893709;SGB=62.3078;VDB=0.842106;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.2:5455350 chr02:005455350 0 W/5455350-5455350 FN943-S Single Base Substitution C-G INTERGENIC HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN2540-S.SNP.2:5455761 chr02:005455761 0 W/5455761-5455761 FN2540-S SNP G -> A AC=1;AN=198;BQB=0.0579836;DP=4208;DP4=1903,2016,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10277e-11;MQSB=0.921218;RPB=0.120518;SGB=42.3199;VDB=0.605821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.2:5464946 chr02:005464946 0 W/5464946-5464946 FN1465-S Single Base Substitution T-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN244-S.SNP.2:5471417 chr02:005471417 0 W/5471417-5471417 FN244-S Single Base Substitution C-T INTRON HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3983-S.SNP.2:5481847 chr02:005481847 0 W/5481847-5481847 FN3983-S SNP A -> T AC=2;AN=168;BQB=0.999259;DP=2837;DP4=1534,1205,16,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.32509e-16;MQSB=0.949879;RPB=0.952975;SGB=109.773;VDB=0.858378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.2:5489954 chr02:005489954 0 W/5489954-5489954 FN1114-S Single Base Substitution C-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1760-S.SNP.2:5492638 chr02:005492638 0 W/5492638-5492638 FN1760-S SNP G -> A AC=1;AN=188;BQB=0.953048;DP=1534;DP4=601,879,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000148267;MQSB=0.985963;RPB=0.966593;SGB=-17.1729;VDB=0.317885;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A65T|373|LOC_Os02g10460|protein_coding|CODING|LOC_Os02g10460.1|1|1) FN618-S.SNP.2:5496607 chr02:005496607 0 W/5496607-5496607 FN618-S Single Base Substitution C-T INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN2284.SNP.2:5497284 chr02:005497284 0 W/5497284-5497284 FN2284 SNP G -> A AC=1;AN=192;BQB=0.135777;DP=5286;DP4=2643,2342,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64555e-11;MQSB=0.968832;RPB=0.465662;SGB=-124.49;VDB=0.567194;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.2:5504312 chr02:005504312 0 W/5504312-5504312 FN670-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN670-S.SNP.2:5504313 chr02:005504313 0 W/5504313-5504313 FN670-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN-20.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN-20 Single Base Substitution A-T UTR_3_PRIME Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1631-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN1631-S Single Base Substitution A-T UTR_3_PRIME Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1754-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN1754-S SNP A -> T AC=1;AN=188;BQB=0.0325683;DP=3835;DP4=1833,1961,19,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.06762e-11;MQSB=0.930197;RPB=0.635039;SGB=-193.454;VDB=0.269164;EFF=UTR_3_PRIME(MODIFIER||301||228|LOC_Os02g10470|protein_coding|CODING|LOC_Os02g10470.1|5|1) FN2323.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN2323 SNP A -> T AC=2;AN=192;BQB=0.997822;DP=4882;DP4=2325,2197,22,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.21037e-33;MQSB=0.758147;RPB=0.518855;SGB=193.047;VDB=0.161335;EFF=UTR_3_PRIME(MODIFIER||301||228|LOC_Os02g10470|protein_coding|CODING|LOC_Os02g10470.1|5|1) FN2619-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN2619-S SNP A -> T AC=2;AN=198;BQB=0.770253;DP=4124;DP4=1981,1866,26,39;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.06521e-36;MQSB=0.533528;RPB=0.997123;SGB=139.174;VDB=0.332656;EFF=UTR_3_PRIME(MODIFIER||301||228|LOC_Os02g10470|protein_coding|CODING|LOC_Os02g10470.1|5|1) FN3354-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN3354-S SNP A -> T AC=2;AN=184;BQB=0.862949;DP=2795;DP4=1306,1369,14,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.18017e-11;MQSB=0.980098;RPB=0.989061;SGB=67.4439;VDB=0.988177;EFF=UTR_3_PRIME(MODIFIER||301||228|LOC_Os02g10470|protein_coding|CODING|LOC_Os02g10470.1|5|1) FN3500-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN3500-S SNP A -> T AC=1;AN=188;BQB=0.379289;DP=2565;DP4=1248,1241,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.1354e-05;MQSB=0.819533;RPB=0.760171;SGB=35.3493;VDB=0.881509;EFF=UTR_3_PRIME(MODIFIER||301||228|LOC_Os02g10470|protein_coding|CODING|LOC_Os02g10470.1|5|1) FN740-S.SNP.2:5504339 chr02:005504339 0 W/5504339-5504339 FN740-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3713-S.SNP.2:5507371 chr02:005507371 0 W/5507371-5507371 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.711564;DP=2804;DP4=1179,1481,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000538569;MQSB=0.992931;RPB=0.932704;SGB=21.8853;VDB=0.367755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.3|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.4|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.5|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P186L|320|LOC_Os02g10480|protein_coding|CODING|LOC_Os02g10480.6|7|1) FN1690-S.SNP.2:5510396 chr02:005510396 0 W/5510396-5510396 FN1690-S SNP A -> T AC=1;AN=188;BQB=0.563562;DP=4216;DP4=1780,2389,8,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.45711e-09;MQSB=0.98706;RPB=0.899717;SGB=-157.8;VDB=0.247508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.2:5511882 chr02:005511882 0 W/5511882-5511882 FN3432-S SNP G -> T AC=2;AN=184;BQB=0.854916;DP=2537;DP4=1285,1128,22,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.531e-22;MQSB=0.860099;RPB=0.999391;SGB=116.749;VDB=0.538107;EFF=INTRON(MODIFIER||||1002|LOC_Os02g10490|protein_coding|CODING|LOC_Os02g10490.1|18|1) FN2465.SNP.2:5516047 chr02:005516047 0 W/5516047-5516047 FN2465 SNP G -> C AC=1;AN=200;BQB=0.991404;DP=5025;DP4=2150,2584,19,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27275e-22;MQSB=0.969221;RPB=0.920988;SGB=41.5933;VDB=0.671249;EFF=INTRON(MODIFIER||||1002|LOC_Os02g10490|protein_coding|CODING|LOC_Os02g10490.1|5|1) FN2640-S.SNP.2:5517386 chr02:005517386 0 W/5517386-5517386 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.614874;DP=4256;DP4=2024,1900,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50421e-14;MQSB=0.425547;RPB=0.217107;SGB=65.9573;VDB=0.880254;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R178|1002|LOC_Os02g10490|protein_coding|CODING|LOC_Os02g10490.1|1|1) FN1368-S.SNP.2:5522422 chr02:005522422 0 W/5522422-5522422 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1048-S.SNP.2:5527166 chr02:005527166 0 W/5527166-5527166 FN1048-S Single Base Substitution T-A INTRON HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1475-S.SNP.2:5527303 chr02:005527303 0 W/5527303-5527303 FN1475-S Single Base Substitution A-C INTRON HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3711-S.SNP.2:5532949 chr02:005532949 0 W/5532949-5532949 FN3711-S SNP T -> C AC=2;AN=190;BQB=0.652029;DP=2739;DP4=1412,1237,7,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.00653e-13;MQSB=0.667216;RPB=0.959119;SGB=103.742;VDB=0.325268;EFF=INTRON(MODIFIER||||799|LOC_Os02g10520|protein_coding|CODING|LOC_Os02g10520.1|4|1) FN715-S.SNP.2:5535790 chr02:005535790 0 W/5535790-5535790 FN715-S Single Base Substitution A-T INTRON HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN2530-S.SNP.2:5538029 chr02:005538029 0 W/5538029-5538029 FN2530-S SNP T -> C AC=2;AN=198;BQB=0.700925;DP=4028;DP4=2118,1671,25,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.36247e-21;MQSB=0.999999;RPB=0.635946;SGB=164.427;VDB=0.899288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.2:5539604 chr02:005539604 0 W/5539604-5539604 FN2247-S SNP A -> G AC=1;AN=190;BQB=0.849547;DP=4774;DP4=2141,2316,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.64209e-09;MQSB=0.824134;RPB=0.999999;SGB=50.3161;VDB=0.318289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.2:5540414 chr02:005540414 0 W/5540414-5540414 FN1228-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2392.SNP.2:5540908 chr02:005540908 0 W/5540908-5540908 FN2392 SNP G -> A AC=1;AN=200;BQB=0.669862;DP=4744;DP4=2182,2307,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210793;MQB=1.98931e-12;MQSB=0.996487;RPB=0.985851;SGB=109.527;VDB=0.767182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.2:5546345 chr02:005546345 0 W/5546345-5546345 FN1613-S Single Base Substitution C-T INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN501-S.SNP.2:5552368 chr02:005552368 0 W/5552368-5552368 FN501-S Single Base Substitution A-G INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1462-S.SNP.2:5564020 chr02:005564020 0 W/5564020-5564020 FN1462-S Single Base Substitution A-G INTERGENIC Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN506-S.SNP.2:5584058 chr02:005584058 0 W/5584058-5584058 FN506-S Single Base Substitution T-G INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN3819-S.SNP.2:5585883 chr02:005585883 0 W/5585883-5585883 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.868884;DP=2058;DP4=896,1070,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.39553;MQB=0.960576;MQSB=0;RPB=0.874929;SGB=44.5415;VDB=0.0652094;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G80|166|LOC_Os02g10614|protein_coding|CODING|LOC_Os02g10614.1|2|1) FN3446-S.SNP.2:5589217 chr02:005589217 0 W/5589217-5589217 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.997477;DP=2318;DP4=923,1323,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.25985e-08;MQSB=0.883163;RPB=0.938875;SGB=57.786;VDB=0.925504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D843G|1111|LOC_Os02g10630|protein_coding|CODING|LOC_Os02g10630.1|6|1) FN489-S.SNP.2:5594058 chr02:005594058 0 W/5594058-5594058 FN489-S Single Base Substitution C-T INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN3521-S.SNP.2:5597801 chr02:005597801 0 W/5597801-5597801 FN3521-S SNP G -> A AC=2;AN=188;BQB=0.938868;DP=2682;DP4=1495,1123,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.59353e-11;MQSB=0.709833;RPB=0.999582;SGB=53.7007;VDB=0.314481;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P173|400|LOC_Os02g10640|protein_coding|CODING|LOC_Os02g10640.1|4|1) FN1678-S.SNP.2:5601268 chr02:005601268 0 W/5601268-5601268 FN1678-S SNP T -> C AC=1;AN=188;BQB=0.858375;DP=3238;DP4=1803,1404,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.72519e-08;MQSB=0.827918;RPB=0.997347;SGB=23.5329;VDB=0.40099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.2:5602164 chr02:005602164 0 W/5602164-5602164 FN3875-S SNP A -> T AC=2;AN=158;BQB=0.967769;DP=1682;DP4=1185,427,14,9;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=3.8237e-05;MQSB=0.0806548;RPB=0.135339;SGB=95.131;VDB=0.867366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.2:5603206 chr02:005603206 0 W/5603206-5603206 FN2578-S SNP C -> G AC=1;AN=198;BQB=0.287297;DP=3931;DP4=2026,1700,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16578e-06;MQSB=0.999992;RPB=0.927773;SGB=40.3588;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.2:5604034 chr02:005604034 0 W/5604034-5604034 FN1686-S SNP G -> A AC=1;AN=188;BQB=0.412592;DP=3622;DP4=1156,2395,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.09849e-10;MQSB=0.983951;RPB=0.377697;SGB=-39.6481;VDB=0.080391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.2:5607505 chr02:005607505 0 W/5607505-5607505 FN1763-S SNP G -> A AC=2;AN=188;BQB=0.372762;DP=3667;DP4=1972,1646,22,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.70936e-16;MQSB=0.986311;RPB=0.998182;SGB=-215.737;VDB=0.423986;EFF=INTRON(MODIFIER||||327|LOC_Os02g10650|protein_coding|CODING|LOC_Os02g10650.1|5|1),INTRON(MODIFIER||||305|LOC_Os02g10650|protein_coding|CODING|LOC_Os02g10650.2|3|1) FN4023-S.SNP.2:5610683 chr02:005610683 0 W/5610683-5610683 FN4023-S SNP T -> A AC=1;AN=168;BQB=0.746631;DP=2720;DP4=1360,1257,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000367647;MQB=2.09629e-05;MQSB=0.538291;RPB=0.0564632;SGB=14.8923;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.2:5611364 chr02:005611364 0 W/5611364-5611364 FN3387-S SNP A -> G AC=1;AN=184;BQB=0.938531;DP=2636;DP4=1329,1223,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.131e-07;MQSB=0.897937;RPB=0.95551;SGB=42.7914;VDB=0.984301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.2:5617126 chr02:005617126 0 W/5617126-5617126 FN2485 SNP G -> A AC=2;AN=200;BQB=0.00229611;DP=4457;DP4=1803,2123,25,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.30012e-16;MQSB=0.0952049;RPB=0.986114;SGB=-45.1863;VDB=0.947137;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.2:5619965 chr02:005619965 0 W/5619965-5619965 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.514536;DP=2648;DP4=1158,1359,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00113293;MQB=0.0101304;MQSB=0.871781;RPB=0.888238;SGB=1.00337;VDB=0.293274;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.2:5620982 chr02:005620982 0 W/5620982-5620982 FN-153 Single Base Substitution A-T INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1548-S.SNP.2:5621033 chr02:005621033 0 W/5621033-5621033 FN1548-S SNP G -> A AC=2;AN=188;BQB=0.536406;DP=3283;DP4=1932,1279,30,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.31788e-21;MQSB=0.688178;RPB=0.998896;SGB=-48.3255;VDB=0.36775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.2:5630343 chr02:005630343 0 W/5630343-5630343 FN3631-S SNP G -> C AC=1;AN=190;BQB=0.83845;DP=2311;DP4=872,1309,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28904e-07;MQSB=0.995602;RPB=0.332808;SGB=44.5415;VDB=0.304945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R185G|660|LOC_Os02g10700|protein_coding|CODING|LOC_Os02g10700.1|2|1) FN2662-S.SNP.2:5638109 chr02:005638109 0 W/5638109-5638109 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.959926;DP=5052;DP4=2257,2508,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.6148e-07;MQSB=0.975396;RPB=0.995249;SGB=25.849;VDB=0.829464;EFF=INTERGENIC(MODIFIER||||||||||1) FN840-S.SNP.2:5647118 chr02:005647118 0 W/5647118-5647118 FN840-S Single Base Substitution G-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3807-S.SNP.2:5662233 chr02:005662233 0 W/5662233-5662233 FN3807-S SNP C -> A AC=1;AN=190;BQB=0.989254;DP=2896;DP4=1363,1359,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000345304;MQB=2.74064e-05;MQSB=0.791105;RPB=0.982341;SGB=25.439;VDB=0.556779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.2:5668969 chr02:005668969 0 W/5668969-5668969 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.432701;DP=5096;DP4=2684,2222,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29324e-09;MQSB=0.932595;RPB=0.995901;SGB=21.6694;VDB=0.824022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.2:5671490 chr02:005671490 0 W/5671490-5671490 FN1210-S Single Base Substitution C-A INTRON HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2609-S.SNP.2:5675972 chr02:005675972 0 W/5675972-5675972 FN2609-S SNP T -> A AC=1;AN=198;BQB=0.861465;DP=4356;DP4=2112,2019,23,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32857e-24;MQSB=0.904578;RPB=0.997424;SGB=187.402;VDB=0.9803;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.2:5679715 chr02:005679715 0 W/5679715-5679715 W554-1-1 Single Base Substitution C-A INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3707-S.SNP.2:5682739 chr02:005682739 0 W/5682739-5682739 FN3707-S SNP A -> G AC=1;AN=190;BQB=0.779588;DP=2755;DP4=1356,1264,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11353e-06;MQSB=0.999431;RPB=0.946984;SGB=53.6492;VDB=0.590277;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.2:5690432 chr02:005690432 0 W/5690432-5690432 W721-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3792-S.SNP.2:5692311 chr02:005692311 0 W/5692311-5692311 FN3792-S SNP A -> G AC=2;AN=190;BQB=0.837656;DP=2477;DP4=1273,1111,14,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10067e-12;MQSB=0.98565;RPB=0.920044;SGB=60.9777;VDB=0.272026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3576-S.SNP.2:5695755 chr02:005695755 0 W/5695755-5695755 FN3576-S SNP A -> T AC=1;AN=188;BQB=0.958077;DP=2564;DP4=1330,1179,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.29103e-08;MQSB=0.941029;RPB=0.839742;SGB=58.0655;VDB=0.200115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gAa|V289E|536|LOC_Os02g10770|protein_coding|CODING|LOC_Os02g10770.2|3|1) FN1754-S.SNP.2:5696555 chr02:005696555 0 W/5696555-5696555 FN1754-S SNP A -> C AC=1;AN=188;BQB=0.919922;DP=3879;DP4=1914,1932,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.10319e-12;MQSB=0.989355;RPB=0.740407;SGB=67.8739;VDB=0.430636;EFF=INTRON(MODIFIER||||536|LOC_Os02g10770|protein_coding|CODING|LOC_Os02g10770.2|2|1) FN926-S.SNP.2:5697056 chr02:005697056 0 W/5697056-5697056 FN926-S Single Base Substitution T-A INTRON HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1725-S.SNP.2:5699635 chr02:005699635 0 W/5699635-5699635 FN1725-S SNP C -> A AC=1;AN=188;BQB=0.862477;DP=2514;DP4=977,1465,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.54499e-06;MQSB=0.987215;RPB=0.569965;SGB=3.99491;VDB=0.0402022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3539-S.SNP.2:5703092 chr02:005703092 0 W/5703092-5703092 FN3539-S SNP A -> C AC=1;AN=188;BQB=0.998124;DP=2636;DP4=1277,1193,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.18506e-07;MQSB=0.875754;RPB=0.91277;SGB=10.8165;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.2:5703295 chr02:005703295 0 W/5703295-5703295 FN794-S Single Base Substitution T-C INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN476-S.SNP.2:5704334 chr02:005704334 0 W/5704334-5704334 FN476-S Single Base Substitution T-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3557-S.SNP.2:5707707 chr02:005707707 0 W/5707707-5707707 FN3557-S SNP C -> A AC=1;AN=188;BQB=0.69875;DP=2686;DP4=1342,1262,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.63873e-09;MQSB=0.873269;RPB=0.754046;SGB=80.782;VDB=0.590519;EFF=INTRON(MODIFIER||||280|LOC_Os02g10780|protein_coding|CODING|LOC_Os02g10780.1|2|1) FN-93.SNP.2:5708137 chr02:005708137 0 W/5708137-5708137 FN-93 Single Base Substitution A-G INTRON HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN-145.SNP.2:5709096 chr02:005709096 0 W/5709096-5709096 FN-145 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN2583-S.SNP.2:5710079 chr02:005710079 0 W/5710079-5710079 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.693556;DP=4733;DP4=2147,2261,11,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49903e-19;MQSB=0.992236;RPB=0.590084;SGB=108.768;VDB=0.703042;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ctc|V1210L|1234|LOC_Os02g10790|protein_coding|CODING|LOC_Os02g10790.1|31|1) FN2300.SNP.2:5715176 chr02:005715176 0 W/5715176-5715176 FN2300 SNP C -> G AC=1;AN=192;BQB=0.557562;DP=4937;DP4=2344,2165,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.24274e-13;MQSB=0.990406;RPB=0.991762;SGB=-39.2487;VDB=0.539258;EFF=INTRON(MODIFIER||||1234|LOC_Os02g10790|protein_coding|CODING|LOC_Os02g10790.1|23|1) FN1670-S.SNP.2:5720184 chr02:005720184 0 W/5720184-5720184 FN1670-S SNP G -> A AC=1;AN=188;BQB=0.00340974;DP=3474;DP4=1820,1615,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.69563e-06;MQSB=0.990582;RPB=0.707035;SGB=-216.876;VDB=0.834965;EFF=INTRON(MODIFIER||||1234|LOC_Os02g10790|protein_coding|CODING|LOC_Os02g10790.1|12|1) FN3472-S.SNP.2:5721930 chr02:005721930 0 W/5721930-5721930 FN3472-S SNP G -> A AC=1;AN=184;BQB=0.984249;DP=2375;DP4=1164,1152,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31877e-08;MQSB=0.953015;RPB=0.975393;SGB=62.3078;VDB=0.924081;EFF=INTRON(MODIFIER||||1234|LOC_Os02g10790|protein_coding|CODING|LOC_Os02g10790.1|5|1) FN471-S.SNP.2:5728004 chr02:005728004 0 W/5728004-5728004 FN471-S Single Base Substitution C-A INTRON HOMO SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2390.SNP.2:5730899 chr02:005730899 0 W/5730899-5730899 FN2390 SNP C -> A AC=2;AN=200;BQB=0.589859;DP=4829;DP4=2373,2115,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.14546e-30;MQSB=0.801274;RPB=0.988627;SGB=162.845;VDB=0.55151;EFF=INTRON(MODIFIER||||416|LOC_Os02g10794|protein_coding|CODING|LOC_Os02g10794.1|2|1) FN2390.SNP.2:5730900 chr02:005730900 0 W/5730900-5730900 FN2390 SNP A -> T AC=2;AN=200;BQB=0.961229;DP=4830;DP4=2377,2154,23,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.23801e-30;MQSB=0.696349;RPB=0.869109;SGB=112.85;VDB=0.512061;EFF=INTRON(MODIFIER||||416|LOC_Os02g10794|protein_coding|CODING|LOC_Os02g10794.1|2|1) FN4275-S.SNP.2:5737474 chr02:005737474 0 W/5737474-5737474 FN4275-S SNP G -> C AC=2;AN=170;BQB=0.981002;DP=2400;DP4=1446,871,12,10;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=3.34492e-09;MQSB=0.742906;RPB=0.575347;SGB=65.8619;VDB=0.956905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K207N|425|LOC_Os02g10800|protein_coding|CODING|LOC_Os02g10800.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K207N|425|LOC_Os02g10800|protein_coding|CODING|LOC_Os02g10800.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K207N|425|LOC_Os02g10800|protein_coding|CODING|LOC_Os02g10800.3|3|1) FN3431-S.SNP.2:5746728 chr02:005746728 0 W/5746728-5746728 FN3431-S SNP C -> T AC=2;AN=184;BQB=0.821628;DP=2874;DP4=1218,1540,3,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.06903e-07;MQSB=0.966032;RPB=0.933136;SGB=42.7914;VDB=0.939442;EFF=INTRON(MODIFIER||||285|LOC_Os02g10820|protein_coding|CODING|LOC_Os02g10820.1|3|1) FN4175-S.SNP.2:5755466 chr02:005755466 0 W/5755466-5755466 FN4175-S SNP T -> C AC=2;AN=170;BQB=0.994361;DP=2377;DP4=1079,1183,11,9;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.65561e-05;MQSB=0.0555148;RPB=0.918075;SGB=83.4133;VDB=0.686841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M406V|436|LOC_Os02g10850|protein_coding|CODING|LOC_Os02g10850.1|2|1) FN509-S.SNP.2:5761468 chr02:005761468 0 W/5761468-5761468 FN509-S Single Base Substitution G-C INTRON HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN908-S.SNP.2:5763180 chr02:005763180 0 W/5763180-5763180 FN908-S Single Base Substitution C-A INTRON HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2533-S.SNP.2:5765606 chr02:005765606 0 W/5765606-5765606 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.882493;DP=4204;DP4=1921,1976,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.33806e-07;MQSB=0.725447;RPB=0.810095;SGB=-15.026;VDB=0.771924;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.2:5770337 chr02:005770337 0 W/5770337-5770337 FN3833-S SNP T -> A AC=2;AN=190;BQB=0.95512;DP=2837;DP4=1290,1458,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.326e-16;MQSB=0.999095;RPB=0.523653;SGB=117.403;VDB=0.518251;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.2:5772092 chr02:005772092 0 W/5772092-5772092 FN4123-S SNP G -> A AC=2;AN=182;BQB=0.905339;DP=3107;DP4=1729,1298,8,16;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=2.29682e-07;MQSB=0.927659;RPB=0.931974;SGB=102.753;VDB=0.504513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.2:5777609 chr02:005777609 0 W/5777609-5777609 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN625-S.SNP.2:5783029 chr02:005783029 0 W/5783029-5783029 FN625-S Single Base Substitution T-G INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4041-S.SNP.2:5786139 chr02:005786139 0 W/5786139-5786139 FN4041-S SNP T -> G AC=1;AN=168;BQB=0.941635;DP=2629;DP4=1349,1163,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=3.04316e-06;MQSB=0.000451997;RPB=0.619721;SGB=74.3269;VDB=0.682974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cCt|H760P|1040|LOC_Os02g10900|protein_coding|CODING|LOC_Os02g10900.1|2|1) FN2442.SNP.2:5811572 chr02:005811572 0 W/5811572-5811572 FN2442 SNP G -> T AC=1;AN=200;BQB=0.766569;DP=5209;DP4=2372,2548,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45583e-15;MQSB=0.987007;RPB=0.0249324;SGB=90.7419;VDB=0.0531207;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.2:5825965 chr02:005825965 0 W/5825965-5825965 FN2274-S SNP A -> G AC=1;AN=190;BQB=0.602297;DP=3950;DP4=1743,1889,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76402e-18;MQSB=0.887711;RPB=0.967439;SGB=67.0756;VDB=0.460549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.2:5830449 chr02:005830449 0 W/5830449-5830449 FN2129-S SNP T -> C AC=1;AN=168;BQB=0.00841845;DP=4226;DP4=2028,2135,19,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.47651e-17;MQSB=0.916094;RPB=0.86723;SGB=-51.4578;VDB=0.665431;EFF=INTRON(MODIFIER||||436|LOC_Os02g10970|protein_coding|CODING|LOC_Os02g10970.1|7|1),INTRON(MODIFIER||||436|LOC_Os02g10970|protein_coding|CODING|LOC_Os02g10970.3|7|1) FN-285.SNP.2:5849460 chr02:005849460 0 W/5849460-5849460 FN-285 Single Base Substitution A-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-212.SNP.2:5861701 chr02:005861701 0 W/5861701-5861701 FN-212 Single Base Substitution C-A INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-217.SNP.2:5865255 chr02:005865255 0 W/5865255-5865255 FN-217 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN4185-S.SNP.2:5867170 chr02:005867170 0 W/5867170-5867170 FN4185-S SNP A -> T AC=2;AN=170;BQB=0.993132;DP=1926;DP4=1084,759,14,2;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.57168e-09;MQSB=0.999871;RPB=0.896475;SGB=45.206;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.2:5868940 chr02:005868940 0 W/5868940-5868940 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.699648;DP=3695;DP4=1912,1749,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.91922e-08;MQSB=0.989021;RPB=0.835966;SGB=31.1628;VDB=0.331828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.2:5879220 chr02:005879220 0 W/5879220-5879220 FN2784-S SNP A -> T AC=1;AN=198;BQB=0.99934;DP=4045;DP4=1843,1998,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000247219;MQB=1.54407e-14;MQSB=0.531352;RPB=0.89475;SGB=90.4807;VDB=0.570238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.2:5884939 chr02:005884939 0 W/5884939-5884939 FN1033-S Single Base Substitution A-C INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN552-S.SNP.2:5887166 chr02:005887166 0 W/5887166-5887166 FN552-S Single Base Substitution T-C INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN552-S.SNP.2:5887169 chr02:005887169 0 W/5887169-5887169 FN552-S Single Base Substitution T-A INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN1405-S.SNP.2:5893467 chr02:005893467 0 W/5893467-5893467 FN1405-S Single Base Substitution G-A INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN4141-S.SNP.2:5895184 chr02:005895184 0 W/5895184-5895184 FN4141-S SNP G -> A AC=1;AN=170;BQB=0.659264;DP=2259;DP4=1055,1153,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000217738;MQSB=0.886309;RPB=0.922063;SGB=24.5502;VDB=0.149496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.2:5895728 chr02:005895728 0 W/5895728-5895728 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.776167;DP=3073;DP4=1442,1523,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66219e-11;MQSB=0.870277;RPB=0.851822;SGB=67.4439;VDB=0.258231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.2:5901867 chr02:005901867 0 W/5901867-5901867 FN1481-S Single Base Substitution A-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1481-S.SNP.2:5901868 chr02:005901868 0 W/5901868-5901868 FN1481-S Single Base Substitution A-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2209-S.SNP.2:5909318 chr02:005909318 0 W/5909318-5909318 FN2209-S SNP C -> A AC=2;AN=190;BQB=0.0171773;DP=4233;DP4=1805,1849,17,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000236239;MQB=1.31976e-17;MQSB=0.264514;RPB=0.442508;SGB=158.388;VDB=0.182782;EFF=INTRON(MODIFIER||||153|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.3|1|1),INTRON(MODIFIER||||222|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.1|1|1),INTRON(MODIFIER||||182|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.2|1|1) FN2121-S.SNP.2:5909342 chr02:005909342 0 W/5909342-5909342 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.201104;DP=3128;DP4=1530,1524,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.60411e-07;MQSB=0.996826;RPB=0.979545;SGB=2.75988;VDB=0.801087;EFF=INTRON(MODIFIER||||153|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.3|1|1),INTRON(MODIFIER||||222|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.1|1|1),INTRON(MODIFIER||||182|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.2|1|1) FN2121-S.SNP.2:5909357 chr02:005909357 0 W/5909357-5909357 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.000370225;DP=2962;DP4=1452,1393,7,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.72851e-06;MQSB=0.990132;RPB=0.180557;SGB=-218.331;VDB=0.389967;EFF=INTRON(MODIFIER||||153|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.3|1|1),INTRON(MODIFIER||||222|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.1|1|1),INTRON(MODIFIER||||182|LOC_Os02g11030|protein_coding|CODING|LOC_Os02g11030.2|1|1) FN2097-S.SNP.2:5911245 chr02:005911245 0 W/5911245-5911245 FN2097-S SNP T -> G AC=2;AN=168;BQB=0.369339;DP=3765;DP4=2056,1626,40,26;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.000796813;MQB=0.00643085;MQSB=0.756804;RPB=0.762569;SGB=-17.6499;VDB=0.346953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.2:5927802 chr02:005927802 0 W/5927802-5927802 FN3796-S SNP G -> C AC=1;AN=190;BQB=0.983343;DP=2630;DP4=1333,1231,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.75709e-06;MQSB=0.982021;RPB=0.796687;SGB=44.5415;VDB=0.698487;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E123Q|342|LOC_Os02g11060|protein_coding|CODING|LOC_Os02g11060.1|4|1) FN-363.SNP.2:5932533 chr02:005932533 0 W/5932533-5932533 FN-363 Single Base Substitution C-T INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2386.SNP.2:5936896 chr02:005936896 0 W/5936896-5936896 FN2386 SNP G -> T AC=1;AN=192;BQB=0.923349;DP=5366;DP4=2684,2171,13,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.35542e-15;MQSB=0.872163;RPB=0.997341;SGB=96.8096;VDB=0.20577;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E75*|88|LOC_Os02g11080|protein_coding|CODING|LOC_Os02g11080.1|2|1) FN2386.SNP.2:5936901 chr02:005936901 0 W/5936901-5936901 FN2386 SNP A -> T AC=1;AN=192;BQB=0.975395;DP=5343;DP4=2826,2157,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42734e-18;MQSB=0.938332;RPB=0.860726;SGB=29.2557;VDB=0.080151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K76N|88|LOC_Os02g11080|protein_coding|CODING|LOC_Os02g11080.1|2|1) FN-167.SNP.2:5949418 chr02:005949418 0 W/5949418-5949418 FN-167 Single Base Substitution C-A INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-167.SNP.2:5949419 chr02:005949419 0 W/5949419-5949419 FN-167 Single Base Substitution G-A INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3830-S.SNP.2:5965931 chr02:005965931 0 W/5965931-5965931 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.956459;DP=3119;DP4=1474,1520,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.66825e-06;MQSB=0.0394289;RPB=0.989839;SGB=46.7622;VDB=0.254189;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.2:5967353 chr02:005967353 0 W/5967353-5967353 FN4300-S SNP G -> C AC=2;AN=170;BQB=0.910992;DP=2574;DP4=1163,1326,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.97408e-13;MQSB=0.566823;RPB=0.998553;SGB=36.9825;VDB=0.800253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S99W|501|LOC_Os02g11130|protein_coding|CODING|LOC_Os02g11130.1|1|1) FN983-S.SNP.2:5968899 chr02:005968899 0 W/5968899-5968899 FN983-S Single Base Substitution A-T INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2498.SNP.2:5980765 chr02:005980765 0 W/5980765-5980765 FN2498 SNP G -> T AC=1;AN=200;BQB=0.804289;DP=4994;DP4=2565,2149,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000400481;MQB=0.000101885;MQSB=0.998036;RPB=0.921324;SGB=-0.141083;VDB=0.928309;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.2:5981645 chr02:005981645 0 W/5981645-5981645 FN909-S Single Base Substitution G-A INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN3808-S.SNP.2:5983996 chr02:005983996 0 W/5983996-5983996 FN3808-S SNP T -> G AC=1;AN=190;BQB=0.238857;DP=3035;DP4=1358,1561,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14183e-06;MQSB=0.916788;RPB=0.97997;SGB=26.2136;VDB=0.365321;EFF=SPLICE_SITE_REGION(LOW||||931|LOC_Os02g11650|protein_coding|CODING|LOC_Os02g11650.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggG|G228|931|LOC_Os02g11650|protein_coding|CODING|LOC_Os02g11650.1|2|1) FN2220-S.SNP.2:5985611 chr02:005985611 0 W/5985611-5985611 FN2220-S SNP T -> A AC=1;AN=190;BQB=0.683367;DP=4972;DP4=2477,1928,19,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201126;MQB=6.37614e-16;MQSB=0.0509859;RPB=0.833627;SGB=96.5165;VDB=0.0691408;EFF=INTRON(MODIFIER||||931|LOC_Os02g11650|protein_coding|CODING|LOC_Os02g11650.1|3|1) FN2494.SNP.2:5986621 chr02:005986621 0 W/5986621-5986621 FN2494 SNP T -> A AC=1;AN=200;BQB=0.167148;DP=4887;DP4=2412,2172,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.32348e-10;MQSB=0.768634;RPB=0.537619;SGB=68.0801;VDB=0.709748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.2:5990261 chr02:005990261 0 W/5990261-5990261 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.941453;DP=4809;DP4=2242,2363,5,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00124766;MQB=0.0220648;MQSB=0.998989;RPB=0.419938;SGB=13.8539;VDB=0.284215;EFF=INTRON(MODIFIER||||1583|LOC_Os02g11660|protein_coding|CODING|LOC_Os02g11660.1|4|1) FN727-S.SNP.2:5995043 chr02:005995043 0 W/5995043-5995043 FN727-S Single Base Substitution T-A INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN2483.SNP.2:5996139 chr02:005996139 0 W/5996139-5996139 FN2483 SNP A -> G AC=2;AN=200;BQB=0.99264;DP=5167;DP4=2571,2208,16,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.24097e-19;MQSB=0.875738;RPB=0.86833;SGB=119.583;VDB=0.214535;EFF=UTR_3_PRIME(MODIFIER||219||103|LOC_Os02g11665|protein_coding|CODING|LOC_Os02g11665.1|1|1) FN3450-S.SNP.2:5998587 chr02:005998587 0 W/5998587-5998587 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.976461;DP=3135;DP4=1578,1469,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00350877;MQB=1.55893e-06;MQSB=0.993759;RPB=0.132537;SGB=44.2207;VDB=0.15118;EFF=UTR_3_PRIME(MODIFIER||2667||103|LOC_Os02g11665|protein_coding|CODING|LOC_Os02g11665.1|1|1) FN3312-S.SNP.2:5999646 chr02:005999646 0 W/5999646-5999646 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.98659;DP=3190;DP4=1754,1343,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.62233e-08;MQSB=0.942163;RPB=0.771723;SGB=39.2697;VDB=0.538544;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.2:6007229 chr02:006007229 0 W/6007229-6007229 FN908-S Single Base Substitution T-A INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN-155.SNP.2:6010558 chr02:006010558 0 W/6010558-6010558 FN-155 Single Base Substitution T-C INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1722-S.SNP.2:6023477 chr02:006023477 0 W/6023477-6023477 FN1722-S SNP A -> C AC=1;AN=188;BQB=0.0281175;DP=3768;DP4=1871,1850,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83674e-08;MQSB=0.999946;RPB=0.0911381;SGB=-10.1101;VDB=0.228031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.2:6026691 chr02:006026691 0 W/6026691-6026691 FN1214-S Single Base Substitution A-T INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1197-S.SNP.2:6030793 chr02:006030793 0 W/6030793-6030793 FN1197-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-403.SNP.2:6053125 chr02:006053125 0 W/6053125-6053125 FN-403 Single Base Substitution C-T INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN3366-S.SNP.2:6054897 chr02:006054897 0 W/6054897-6054897 FN3366-S SNP G -> C AC=2;AN=184;BQB=0.998923;DP=2988;DP4=1607,1280,20,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.55149e-19;MQSB=0.774035;RPB=0.575902;SGB=71.1891;VDB=0.324585;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.2:6056748 chr02:006056748 0 W/6056748-6056748 FN788-S Single Base Substitution G-A INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN-132.SNP.2:6068901 chr02:006068901 0 W/6068901-6068901 FN-132 Single Base Substitution G-A INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN821-S.SNP.2:6071090 chr02:006071090 0 W/6071090-6071090 FN821-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g11760 pleiotropic drug resistance protein, putative, expressed SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN904-S.SNP.2:6071945 chr02:006071945 0 W/6071945-6071945 FN904-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN3499-S.SNP.2:6074949 chr02:006074949 0 W/6074949-6074949 FN3499-S SNP A -> T AC=2;AN=188;BQB=0.994587;DP=3108;DP4=1729,1307,16,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.32535e-15;MQSB=0.981304;RPB=0.257143;SGB=108.042;VDB=0.506391;EFF=INTRON(MODIFIER||||1444|LOC_Os02g11760|protein_coding|CODING|LOC_Os02g11760.1|21|1) FN1038-S.SNP.2:6088675 chr02:006088675 0 W/6088675-6088675 FN1038-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g11780 transcription factor S-II, central domain containing protein, expressed SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1057-S.SNP.2:6097259 chr02:006097259 0 W/6097259-6097259 FN1057-S Single Base Substitution T-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN4124-S.SNP.2:6113274 chr02:006113274 0 W/6113274-6113274 FN4124-S SNP C -> A AC=1;AN=182;BQB=0.989887;DP=3015;DP4=1442,1494,11,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.76824e-15;MQSB=0.999854;RPB=0.954261;SGB=81.2689;VDB=0.963357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S103R|728|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S103R|727|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S103R|544|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.3|5|1),SPLICE_SITE_REGION(LOW||||728|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.1|5|1),SPLICE_SITE_REGION(LOW||||727|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.2|5|1),SPLICE_SITE_REGION(LOW||||544|LOC_Os02g11820|protein_coding|CODING|LOC_Os02g11820.3|5|1) FN-72.SNP.2:6118514 chr02:006118514 0 W/6118514-6118514 FN-72 Single Base Substitution G-T UTR_3_PRIME HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2140-S.SNP.2:6125653 chr02:006125653 0 W/6125653-6125653 FN2140-S SNP C -> T AC=2;AN=168;BQB=0.337465;DP=4405;DP4=1971,2327,49,47;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0;MQSB=0.998895;RPB=0.958753;SGB=151.721;VDB=0.844944;EFF=INTRON(MODIFIER||||907|LOC_Os02g11830|protein_coding|CODING|LOC_Os02g11830.2|9|1) FN-121.SNP.2:6136942 chr02:006136942 0 W/6136942-6136942 FN-121 Single Base Substitution A-G INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1080-S.SNP.2:6142240 chr02:006142240 0 W/6142240-6142240 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2681-S.SNP.2:6143260 chr02:006143260 0 W/6143260-6143260 FN2681-S SNP G -> C AC=1;AN=200;BQB=0.903175;DP=5109;DP4=2379,2450,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.61721e-14;MQSB=0.84789;RPB=0.37841;SGB=55.5366;VDB=0.386474;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.2:6144154 chr02:006144154 0 W/6144154-6144154 FN1309-S Single Base Substitution C-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1094-S.SNP.2:6144240 chr02:006144240 0 W/6144240-6144240 FN1094-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g11850 expressed protein SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3756-S.SNP.2:6146233 chr02:006146233 0 W/6146233-6146233 FN3756-S SNP A -> T AC=1;AN=190;BQB=0.926262;DP=2776;DP4=1339,1251,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74403e-10;MQSB=0.998611;RPB=0.87468;SGB=33.8752;VDB=0.0430634;EFF=UTR_3_PRIME(MODIFIER||173||51|LOC_Os02g11859|protein_coding|CODING|LOC_Os02g11859.1|1|1) FN2620-S.SNP.2:6164283 chr02:006164283 0 W/6164283-6164283 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.970174;DP=4612;DP4=2320,1948,19,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.47511e-15;MQSB=0.383464;RPB=0.703812;SGB=26.8957;VDB=0.81985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3738-S.SNP.2:6166458 chr02:006166458 0 W/6166458-6166458 FN3738-S SNP C -> T AC=2;AN=190;BQB=0.633297;DP=2524;DP4=1281,1107,10,5;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=2.39404e-06;MQSB=0.0181495;RPB=0.723661;SGB=4.11112;VDB=0.225917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.2:6171212 chr02:006171212 0 W/6171212-6171212 FN2254-S SNP C -> T AC=2;AN=190;BQB=0.815996;DP=4836;DP4=2216,2260,20,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.09144e-18;MQSB=0.985613;RPB=0.981966;SGB=110.732;VDB=0.901321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.2:6178762 chr02:006178762 0 W/6178762-6178762 FN1693-S SNP G -> A AC=1;AN=188;BQB=0.0711006;DP=3453;DP4=2030,1398,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000185093;MQSB=0.899512;RPB=0.604199;SGB=0.908326;VDB=0.998844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.2:6183616 chr02:006183616 0 W/6183616-6183616 FN2220-S SNP C -> G AC=2;AN=190;BQB=0.812812;DP=4583;DP4=1945,2251,23,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.12034e-27;MQSB=0.610732;RPB=0.329296;SGB=61.6046;VDB=0.489608;EFF=START_GAINED(LOW||||1144|LOC_Os02g11930|protein_coding|CODING|LOC_Os02g11930.1|1|1),UTR_5_PRIME(MODIFIER||336||1144|LOC_Os02g11930|protein_coding|CODING|LOC_Os02g11930.1|1|1) FN2711-S.SNP.2:6184935 chr02:006184935 0 W/6184935-6184935 FN2711-S SNP T -> C AC=1;AN=198;BQB=0.242552;DP=4820;DP4=2349,2258,14,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.26225e-08;MQSB=0.923111;RPB=0.200188;SGB=47.4799;VDB=0.647376;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P328|1144|LOC_Os02g11930|protein_coding|CODING|LOC_Os02g11930.1|1|1) FN-173.SNP.2:6185602 chr02:006185602 0 W/6185602-6185602 FN-173 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g11930 receptor-like protein kinase precursor, putative, expressed SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN4041-S.SNP.2:6192791 chr02:006192791 0 W/6192791-6192791 FN4041-S SNP T -> C AC=1;AN=168;BQB=0.986462;DP=2807;DP4=1281,1257,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.23916e-09;MQSB=0.937946;RPB=0.934656;SGB=24.6155;VDB=0.407768;EFF=INTRON(MODIFIER||||445|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.1|13|1),INTRON(MODIFIER||||187|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.2|12|1) FN-110.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN-110 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-88.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN-88 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN1025-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN1025-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1261-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN1261-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1497-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN1497-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2263-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN2263-S SNP C -> T AC=2;AN=190;BQB=0.990497;DP=4871;DP4=2088,2458,31,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.00981e-37;MQSB=0.998123;RPB=0.982992;SGB=156.461;VDB=0.432328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P412S|445|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.1|14|1),UTR_3_PRIME(MODIFIER||877||187|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.2|13|1) FN3432-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN3432-S SNP C -> T AC=2;AN=184;BQB=0.363745;DP=2586;DP4=1107,1379,10,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.58766e-15;MQSB=0.946573;RPB=0.466525;SGB=106.184;VDB=0.0477143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P412S|445|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.1|14|1),UTR_3_PRIME(MODIFIER||877||187|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.2|13|1) FN3860-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN3860-S SNP C -> T AC=2;AN=158;BQB=0.389068;DP=2623;DP4=1137,1377,13,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.41036e-13;MQSB=0.962917;RPB=0.82364;SGB=101.462;VDB=0.787817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P412S|445|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.1|14|1),UTR_3_PRIME(MODIFIER||877||187|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.2|13|1) FN4140-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN4140-S SNP C -> T AC=2;AN=170;BQB=0.601469;DP=2679;DP4=1171,1399,22,22;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.28345e-23;MQSB=0.998641;RPB=0.831107;SGB=93.1634;VDB=0.542146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P412S|445|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.1|14|1),UTR_3_PRIME(MODIFIER||877||187|LOC_Os02g11940|protein_coding|CODING|LOC_Os02g11940.2|13|1) FN923-S.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 FN923-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. W7-1-1.SNP.2:6193169 chr02:006193169 0 W/6193169-6193169 W7-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g11940 sterol glucosyltransferase, putative, expressed SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2611-S.SNP.2:6196255 chr02:006196255 0 W/6196255-6196255 FN2611-S SNP A -> G AC=1;AN=198;BQB=0.999793;DP=4137;DP4=1687,1782,16,27;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.05229e-22;MQSB=0.645986;RPB=0.99628;SGB=-140.781;VDB=0.23558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.2:6198671 chr02:006198671 0 W/6198671-6198671 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.289262;DP=2746;DP4=1379,1264,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00510413;MQSB=0.956546;RPB=0.993957;SGB=35.1773;VDB=0.818272;EFF=INTRON(MODIFIER||||964|LOC_Os02g11960|protein_coding|CODING|LOC_Os02g11960.1|2|1) FN4149-S.SNP.2:6201777 chr02:006201777 0 W/6201777-6201777 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.911918;DP=2373;DP4=1211,1083,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.72141e-11;MQSB=0.993914;RPB=0.999683;SGB=29.6545;VDB=0.850357;EFF=INTRON(MODIFIER||||964|LOC_Os02g11960|protein_coding|CODING|LOC_Os02g11960.1|11|1) FN3567-S.SNP.2:6203062 chr02:006203062 0 W/6203062-6203062 FN3567-S SNP T -> A AC=1;AN=188;BQB=0.435834;DP=2855;DP4=1454,1327,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03297e-05;MQSB=0.987798;RPB=0.762046;SGB=48.979;VDB=0.979791;EFF=INTRON(MODIFIER||||964|LOC_Os02g11960|protein_coding|CODING|LOC_Os02g11960.1|14|1) FN1380-S.SNP.2:6204765 chr02:006204765 0 W/6204765-6204765 FN1380-S Single Base Substitution A-T INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN449-S.SNP.2:6207090 chr02:006207090 0 W/6207090-6207090 FN449-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN4070-S.SNP.2:6211273 chr02:006211273 0 W/6211273-6211273 FN4070-S SNP G -> T AC=2;AN=182;BQB=0.872953;DP=3262;DP4=1611,1557,24,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00030656;MQB=2.50298e-24;MQSB=0.0239297;RPB=0.950013;SGB=206.502;VDB=0.812414;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S313*|1131|LOC_Os02g11980|protein_coding|CODING|LOC_Os02g11980.1|1|1);LOF=(LOC_Os02g11980|LOC_Os02g11980|1|1.00);NMD=(LOC_Os02g11980|LOC_Os02g11980|1|1.00) FN3678-S.SNP.2:6214711 chr02:006214711 0 W/6214711-6214711 FN3678-S SNP A -> T AC=1;AN=190;BQB=0.377906;DP=2830;DP4=1317,1416,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.88773e-05;MQSB=0.93526;RPB=0.920291;SGB=39.6545;VDB=0.456742;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.2:6216164 chr02:006216164 0 W/6216164-6216164 FN2412 SNP G -> A AC=1;AN=200;BQB=0.668661;DP=4741;DP4=2216,2193,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.649e-15;MQSB=0.968382;RPB=0.932347;SGB=-109.649;VDB=0.786467;EFF=INTRON(MODIFIER||||298|LOC_Os02g11990|protein_coding|CODING|LOC_Os02g11990.1|4|1) FN1330-S.SNP.2:6218892 chr02:006218892 0 W/6218892-6218892 FN1330-S Single Base Substitution T-C INTRON HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2374.SNP.2:6221851 chr02:006221851 0 W/6221851-6221851 FN2374 SNP T -> A AC=1;AN=192;BQB=0.534544;DP=5318;DP4=2486,2606,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.05491e-10;MQSB=0.8737;RPB=0.160005;SGB=54.0374;VDB=0.043886;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.2:6228019 chr02:006228019 0 W/6228019-6228019 FN669-S Single Base Substitution G-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-63.SNP.2:6238120 chr02:006238120 0 W/6238120-6238120 FN-63 Single Base Substitution C-T INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN3490-S.SNP.2:6240090 chr02:006240090 0 W/6240090-6240090 FN3490-S SNP G -> T AC=1;AN=184;BQB=0.703591;DP=3037;DP4=1314,1648,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.97201e-06;MQSB=0.869693;RPB=0.138193;SGB=39.699;VDB=0.91494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.2:6240091 chr02:006240091 0 W/6240091-6240091 FN3490-S SNP G -> T AC=1;AN=184;BQB=0.96604;DP=3046;DP4=1304,1672,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55351e-07;MQSB=0.858069;RPB=0.756282;SGB=44.2207;VDB=0.98623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.2:6242324 chr02:006242324 0 W/6242324-6242324 FN2767-S SNP A -> G AC=1;AN=198;BQB=0.991133;DP=4282;DP4=1938,2111,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.39892e-12;MQSB=0.982202;RPB=0.622765;SGB=50.1053;VDB=0.701482;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.2:6266318 chr02:006266318 0 W/6266318-6266318 FN928-S Single Base Substitution T-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN323-S.SNP.2:6269057 chr02:006269057 0 W/6269057-6269057 FN323-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2618-S.SNP.2:6276980 chr02:006276980 0 W/6276980-6276980 FN2618-S SNP C -> T AC=1;AN=198;BQB=0.671407;DP=4074;DP4=1797,2072,8,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.59356e-12;MQSB=0.895042;RPB=0.994926;SGB=55.2955;VDB=0.0974793;EFF=INTRON(MODIFIER||||409|LOC_Os02g12100|protein_coding|CODING|LOC_Os02g12100.1|4|1) FN3756-S.SNP.2:6289497 chr02:006289497 0 W/6289497-6289497 FN3756-S SNP T -> A AC=1;AN=190;BQB=0.959134;DP=2644;DP4=1368,1171,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.73891e-07;MQSB=0.984454;RPB=0.999925;SGB=25.439;VDB=0.97674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.2:6290666 chr02:006290666 0 W/6290666-6290666 FN2361 SNP C -> T AC=1;AN=192;BQB=0.891942;DP=5066;DP4=2457,2293,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.99579e-07;MQSB=0.927299;RPB=0.907194;SGB=2.66176;VDB=0.979548;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.2:6292674 chr02:006292674 0 W/6292674-6292674 FN2299 SNP T -> A AC=1;AN=192;BQB=0.698694;DP=4477;DP4=2316,1853,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000893455;MQB=0.000796692;MQSB=0.000217926;RPB=0.997512;SGB=25.5227;VDB=0.726253;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.2:6299587 chr02:006299587 0 W/6299587-6299587 FN4182-S SNP C -> G AC=2;AN=170;BQB=0.996303;DP=2546;DP4=1218,1255,13,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.34995e-15;MQSB=0.929884;RPB=0.802119;SGB=79.6325;VDB=0.170967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q2073H|2163|LOC_Os02g12120|protein_coding|CODING|LOC_Os02g12120.1|14|1),SPLICE_SITE_REGION(LOW||||2163|LOC_Os02g12120|protein_coding|CODING|LOC_Os02g12120.1|14|1) FN-182.SNP.2:6303182 chr02:006303182 0 W/6303182-6303182 FN-182 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN711-S.SNP.2:6306913 chr02:006306913 0 W/6306913-6306913 FN711-S Single Base Substitution G-A INTRON HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. W453-3-1.SNP.2:6310686 chr02:006310686 0 W/6310686-6310686 W453-3-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2328.SNP.2:6326310 chr02:006326310 0 W/6326310-6326310 FN2328 SNP G -> A AC=1;AN=192;BQB=0.983037;DP=4835;DP4=1998,2433,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.77672e-16;MQSB=0.00215596;RPB=0.464552;SGB=59.6861;VDB=0.230667;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G16|217|LOC_Os02g12170|protein_coding|CODING|LOC_Os02g12170.1|1|1) FN2328.SNP.2:6326315 chr02:006326315 0 W/6326315-6326315 FN2328 SNP T -> C AC=1;AN=192;BQB=0.917909;DP=4863;DP4=1872,2460,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.58281e-17;MQSB=0.00489431;RPB=0.88314;SGB=29.2557;VDB=0.174368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T15A|217|LOC_Os02g12170|protein_coding|CODING|LOC_Os02g12170.1|1|1) FN2328.SNP.2:6326316 chr02:006326316 0 W/6326316-6326316 FN2328 SNP G -> A AC=1;AN=192;BQB=0.511839;DP=4837;DP4=1998,2410,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.23437e-17;MQSB=0.00374657;RPB=0.892206;SGB=89.6809;VDB=0.130058;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N14|217|LOC_Os02g12170|protein_coding|CODING|LOC_Os02g12170.1|1|1) FN670-S.SNP.2:6327331 chr02:006327331 0 W/6327331-6327331 FN670-S Single Base Substitution T-A INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3115-S.SNP.2:6338143 chr02:006338143 0 W/6338143-6338143 FN3115-S SNP C -> T AC=2;AN=184;BQB=0.891979;DP=3293;DP4=1760,1402,38,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.08161e-29;MQSB=0.99661;RPB=0.865121;SGB=233.149;VDB=0.696805;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.2:6340551 chr02:006340551 0 W/6340551-6340551 FN573-S Single Base Substitution G-T INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3542-S.SNP.2:6346038 chr02:006346038 0 W/6346038-6346038 FN3542-S SNP C -> A AC=2;AN=188;BQB=0.984189;DP=2853;DP4=1374,1377,11,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.11726e-11;MQSB=0.997899;RPB=0.196177;SGB=50.1574;VDB=0.168521;EFF=INTRON(MODIFIER||||265|LOC_Os02g12210|protein_coding|CODING|LOC_Os02g12210.1|3|1) FN3542-S.SNP.2:6346039 chr02:006346039 0 W/6346039-6346039 FN3542-S SNP C -> A AC=2;AN=188;BQB=0.835099;DP=2857;DP4=1351,1390,11,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.07038e-11;MQSB=0.999377;RPB=0.401066;SGB=50.1574;VDB=0.127856;EFF=INTRON(MODIFIER||||265|LOC_Os02g12210|protein_coding|CODING|LOC_Os02g12210.1|3|1) FN2224-S.SNP.2:6351177 chr02:006351177 0 W/6351177-6351177 FN2224-S SNP A -> T AC=2;AN=190;BQB=0.621278;DP=4641;DP4=1992,2228,30,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49183e-27;MQSB=0.994652;RPB=0.0374805;SGB=-110.933;VDB=0.453703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.2:6351478 chr02:006351478 0 W/6351478-6351478 FN1396-S Single Base Substitution A-G INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2782-S.SNP.2:6358439 chr02:006358439 0 W/6358439-6358439 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.876668;DP=3451;DP4=1703,1549,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68314e-11;MQSB=0.982775;RPB=0.406798;SGB=54.5295;VDB=0.0903482;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.2:6359217 chr02:006359217 0 W/6359217-6359217 FN704-S Single Base Substitution G-C INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1314-S.SNP.2:6360272 chr02:006360272 0 W/6360272-6360272 FN1314-S Single Base Substitution G-T INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN2366.SNP.2:6360333 chr02:006360333 0 W/6360333-6360333 FN2366 SNP G -> T AC=1;AN=192;BQB=0.393749;DP=4965;DP4=2288,2217,11,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15502e-17;MQSB=0.67232;RPB=0.998809;SGB=59.6861;VDB=0.46089;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.2:6362754 chr02:006362754 0 W/6362754-6362754 FN833-S Single Base Substitution T-C INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1480-S.SNP.2:6362933 chr02:006362933 0 W/6362933-6362933 FN1480-S Single Base Substitution G-A INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2705-S.SNP.2:6373808 chr02:006373808 0 W/6373808-6373808 FN2705-S SNP T -> C AC=1;AN=200;BQB=0.738578;DP=4991;DP4=2162,2597,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74011e-11;MQSB=0.869613;RPB=0.971364;SGB=72.6852;VDB=0.312584;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.2:6376474 chr02:006376474 0 W/6376474-6376474 FN673-S Single Base Substitution C-T INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. W426-1-1.SNP.2:6378006 chr02:006378006 0 W/6378006-6378006 W426-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN4189-S.SNP.2:6387602 chr02:006387602 0 W/6387602-6387602 FN4189-S SNP G -> C AC=1;AN=170;BQB=0.652752;DP=2647;DP4=1054,1449,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.15997e-08;MQSB=0.998705;RPB=0.996132;SGB=34.878;VDB=0.828612;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgG|R46|73|LOC_Os02g12270|protein_coding|CODING|LOC_Os02g12270.1|2|1) FN-65.SNP.2:6387653 chr02:006387653 0 W/6387653-6387653 FN-65 Single Base Substitution G-A INTRON HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN260-S.SNP.2:6395183 chr02:006395183 0 W/6395183-6395183 FN260-S Single Base Substitution A-G INTERGENIC HOMO SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN-341.SNP.2:6413292 chr02:006413292 0 W/6413292-6413292 FN-341 Single Base Substitution T-C INTRON HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN3542-S.SNP.2:6415872 chr02:006415872 0 W/6415872-6415872 FN3542-S SNP A -> T AC=2;AN=188;BQB=0.994862;DP=2650;DP4=1483,1057,12,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.36425e-16;MQSB=0.605058;RPB=0.641846;SGB=82.0471;VDB=0.241866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3542-S.SNP.2:6415873 chr02:006415873 0 W/6415873-6415873 FN3542-S SNP C -> T AC=2;AN=188;BQB=0.965976;DP=2649;DP4=1497,1081,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.11618e-16;MQSB=0.549944;RPB=0.72891;SGB=108.042;VDB=0.276857;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.2:6418512 chr02:006418512 0 W/6418512-6418512 W42-1-3S-1 Single Base Substitution G-A INTRON HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3939-S.SNP.2:6420533 chr02:006420533 0 W/6420533-6420533 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.998009;DP=2657;DP4=1296,1287,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.99281e-06;MQSB=0.911392;RPB=0.269335;SGB=27.3346;VDB=0.231252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.2:6424292 chr02:006424292 0 W/6424292-6424292 FN2337 SNP T -> C AC=1;AN=192;BQB=0.331922;DP=4778;DP4=2133,2253,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.86614e-10;MQSB=0.997635;RPB=0.286425;SGB=68.2948;VDB=0.852738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.2:6425715 chr02:006425715 0 W/6425715-6425715 FN2205-S SNP C -> T AC=1;AN=190;BQB=0.917066;DP=4866;DP4=2274,2310,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.31293e-08;MQSB=0.528976;RPB=0.916012;SGB=31.3213;VDB=0.834857;EFF=INTRON(MODIFIER||||510|LOC_Os02g12350|protein_coding|CODING|LOC_Os02g12350.1|5|1) FN2540-S.SNP.2:6435676 chr02:006435676 0 W/6435676-6435676 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.1166;DP=4424;DP4=1943,2263,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.78225e-08;MQSB=0.963374;RPB=0.596309;SGB=26.7492;VDB=0.682835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A634T|782|LOC_Os02g12360|protein_coding|CODING|LOC_Os02g12360.1|12|1) FN-36.SNP.2:6437783 chr02:006437783 0 W/6437783-6437783 FN-36 Single Base Substitution T-G INTRON Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN4304-S.SNP.2:6444709 chr02:006444709 0 W/6444709-6444709 FN4304-S SNP T -> G AC=1;AN=170;BQB=0.780967;DP=2713;DP4=1361,1274,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.30894e-05;MQSB=0.917397;RPB=0.320878;SGB=43.4296;VDB=0.975192;EFF=UTR_3_PRIME(MODIFIER||1119||140|LOC_Os02g12370|protein_coding|CODING|LOC_Os02g12370.1|1|1) FN4164-S.SNP.2:6445213 chr02:006445213 0 W/6445213-6445213 FN4164-S SNP A -> G AC=1;AN=170;BQB=0.62587;DP=2393;DP4=966,1346,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.21564e-08;MQSB=0.999182;RPB=0.0928828;SGB=4.33246;VDB=0.135993;EFF=UTR_3_PRIME(MODIFIER||1623||140|LOC_Os02g12370|protein_coding|CODING|LOC_Os02g12370.1|1|1) FN3764-S.SNP.2:6447600 chr02:006447600 0 W/6447600-6447600 FN3764-S SNP G -> C AC=2;AN=190;BQB=0.813877;DP=3238;DP4=1637,1479,10,15;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.000617665;MQB=0.000267972;MQSB=0.769233;RPB=0.956276;SGB=108.296;VDB=0.0106135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q128H|509|LOC_Os02g12380|protein_coding|CODING|LOC_Os02g12380.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q128H|508|LOC_Os02g12380|protein_coding|CODING|LOC_Os02g12380.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q128H|498|LOC_Os02g12380|protein_coding|CODING|LOC_Os02g12380.3|1|1) FN4184-S.SNP.2:6453910 chr02:006453910 0 W/6453910-6453910 FN4184-S SNP G -> C AC=2;AN=170;BQB=0.867737;DP=2575;DP4=1377,1109,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.58883e-10;MQSB=0.625075;RPB=0.876233;SGB=62.4192;VDB=0.434801;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.2:6460970 chr02:006460970 0 W/6460970-6460970 FN-192 Single Base Substitution A-C INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN585-S.SNP.2:6461007 chr02:006461007 0 W/6461007-6461007 FN585-S Single Base Substitution A-G INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN3322-S.SNP.2:6461734 chr02:006461734 0 W/6461734-6461734 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.94934;DP=3173;DP4=1326,1585,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69442e-05;MQSB=0.998884;RPB=0.633823;SGB=39.699;VDB=0.209188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.2:6466046 chr02:006466046 0 W/6466046-6466046 FN3305-S SNP A -> T AC=1;AN=184;BQB=0.741635;DP=2591;DP4=1137,1370,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000710016;MQSB=0.990773;RPB=0.811514;SGB=21.6609;VDB=0.577325;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.2:6466097 chr02:006466097 0 W/6466097-6466097 FN520-S Single Base Substitution A-G INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN622-S.SNP.2:6468331 chr02:006468331 0 W/6468331-6468331 FN622-S Single Base Substitution T-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN959-S.SNP.2:6469408 chr02:006469408 0 W/6469408-6469408 FN959-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g12400 receptor-like protein kinase precursor, putative, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN959-S.SNP.2:6469409 chr02:006469409 0 W/6469409-6469409 FN959-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g12400 receptor-like protein kinase precursor, putative, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN661-S.SNP.2:6475396 chr02:006475396 0 W/6475396-6475396 FN661-S Single Base Substitution C-A INTERGENIC HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN3729-S.SNP.2:6475516 chr02:006475516 0 W/6475516-6475516 FN3729-S SNP T -> G AC=1;AN=190;BQB=0.991035;DP=2689;DP4=1389,1164,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72203e-11;MQSB=0.784558;RPB=0.119565;SGB=94.6341;VDB=0.390299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.2:6475771 chr02:006475771 0 W/6475771-6475771 FN3729-S SNP G -> T AC=1;AN=190;BQB=0.99901;DP=2278;DP4=1102,1037,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.40098e-07;MQSB=0.997109;RPB=0.988312;SGB=15.9981;VDB=0.568731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.2:6477315 chr02:006477315 0 W/6477315-6477315 FN3729-S SNP A -> T AC=1;AN=190;BQB=0.999808;DP=3000;DP4=1339,1544,18,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.75715e-12;MQSB=0.823354;RPB=0.930371;SGB=90.0802;VDB=0.968556;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y831*|962|LOC_Os02g12420|protein_coding|CODING|LOC_Os02g12420.1|2|1) FN1724-S.SNP.2:6477642 chr02:006477642 0 W/6477642-6477642 FN1724-S SNP G -> A AC=1;AN=188;BQB=0.0477323;DP=3881;DP4=1863,1976,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33857e-09;MQSB=0.951363;RPB=0.997938;SGB=-38.278;VDB=0.984247;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L790|962|LOC_Os02g12420|protein_coding|CODING|LOC_Os02g12420.1|1|1) FN3853-S.SNP.2:6484110 chr02:006484110 0 W/6484110-6484110 FN3853-S SNP T -> C AC=2;AN=158;BQB=0.134707;DP=2125;DP4=1051,923,10,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.35622e-05;MQSB=0.945623;RPB=0.505202;SGB=2.08615;VDB=0.575767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.2:6489954 chr02:006489954 0 W/6489954-6489954 FN2411 SNP A -> G AC=1;AN=200;BQB=0.800139;DP=4979;DP4=2548,2073,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54646e-09;MQSB=0.958294;RPB=0.817057;SGB=58.8698;VDB=0.663114;EFF=UTR_3_PRIME(MODIFIER||332||701|LOC_Os02g12440|protein_coding|CODING|LOC_Os02g12440.1|2|1) FN337-S.SNP.2:6494962 chr02:006494962 0 W/6494962-6494962 FN337-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN2452.SNP.2:6497782 chr02:006497782 0 W/6497782-6497782 FN2452 SNP C -> A AC=2;AN=200;BQB=0.598442;DP=3604;DP4=1870,1474,18,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.72207e-10;MQSB=0.998218;RPB=0.988108;SGB=79.9264;VDB=0.629266;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.2:6499624 chr02:006499624 0 W/6499624-6499624 FN793-S Single Base Substitution T-C INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3357-S.SNP.2:6504114 chr02:006504114 0 W/6504114-6504114 FN3357-S SNP A -> C AC=1;AN=184;BQB=0.965344;DP=3444;DP4=1692,1631,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19331e-11;MQSB=0.993043;RPB=0.918414;SGB=60.4004;VDB=0.0996762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.2:6506183 chr02:006506183 0 W/6506183-6506183 FN1056-S Single Base Substitution C-G INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN1407-S.SNP.2:6506846 chr02:006506846 0 W/6506846-6506846 FN1407-S Single Base Substitution A-G INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2584-S.SNP.2:6509402 chr02:006509402 0 W/6509402-6509402 FN2584-S SNP G -> T AC=1;AN=198;BQB=0.714611;DP=4242;DP4=1748,2272,11,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73041e-20;MQSB=0.916995;RPB=0.998155;SGB=122.837;VDB=0.867699;EFF=UTR_3_PRIME(MODIFIER||2231||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.10|3|1),UTR_3_PRIME(MODIFIER||976||156|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.7|3|1),UTR_3_PRIME(MODIFIER||2231||211|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.1|2|1),UTR_3_PRIME(MODIFIER||2157||159|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.3|4|1),UTR_3_PRIME(MODIFIER||2231||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.5|3|1),UTR_3_PRIME(MODIFIER||2231||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.6|2|1),UTR_3_PRIME(MODIFIER||2157||159|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.9|4|1),INTRON(MODIFIER||||156|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.8|3|1),INTRON(MODIFIER||||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.4|3|1),INTRON(MODIFIER||||170|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.2|2|1) FN3481-S.SNP.2:6509788 chr02:006509788 0 W/6509788-6509788 FN3481-S SNP C -> A AC=1;AN=184;BQB=0.951856;DP=2385;DP4=1074,1236,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75185e-10;MQSB=0.942136;RPB=0.949427;SGB=66.8296;VDB=0.142522;EFF=UTR_3_PRIME(MODIFIER||1845||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.10|3|1),UTR_3_PRIME(MODIFIER||590||156|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.7|3|1),UTR_3_PRIME(MODIFIER||1845||211|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.1|2|1),UTR_3_PRIME(MODIFIER||1771||159|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.3|4|1),UTR_3_PRIME(MODIFIER||1845||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.5|3|1),UTR_3_PRIME(MODIFIER||1845||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.6|2|1),UTR_3_PRIME(MODIFIER||1771||159|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.9|4|1),INTRON(MODIFIER||||156|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.8|3|1),INTRON(MODIFIER||||157|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.4|3|1),INTRON(MODIFIER||||170|LOC_Os02g12480|protein_coding|CODING|LOC_Os02g12480.2|2|1) FN3761-S.SNP.2:6519503 chr02:006519503 0 W/6519503-6519503 FN3761-S SNP G -> A AC=2;AN=190;BQB=0.898693;DP=2954;DP4=1374,1460,9,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.63001e-11;MQSB=0.972693;RPB=0.994876;SGB=71.8647;VDB=0.0902495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.2:6520622 chr02:006520622 0 W/6520622-6520622 FN1610-S Single Base Substitution A-T INTERGENIC Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3610-S.SNP.2:6520622 chr02:006520622 0 W/6520622-6520622 FN3610-S SNP A -> T AC=1;AN=190;BQB=0.534449;DP=3494;DP4=1812,1538,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14976e-12;MQSB=0.895479;RPB=0.754282;SGB=-12.1142;VDB=0.322864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.2:6521546 chr02:006521546 0 W/6521546-6521546 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.990358;DP=2963;DP4=1179,1560,10,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.78603e-18;MQSB=0.819286;RPB=0.990923;SGB=121.957;VDB=0.54632;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.2:6525526 chr02:006525526 0 W/6525526-6525526 FN808-S Single Base Substitution C-A INTERGENIC HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN808-S.SNP.2:6525527 chr02:006525527 0 W/6525527-6525527 FN808-S Single Base Substitution C-A INTERGENIC HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN808-S.SNP.2:6525528 chr02:006525528 0 W/6525528-6525528 FN808-S Single Base Substitution T-C INTERGENIC HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN762-S.SNP.2:6534321 chr02:006534321 0 W/6534321-6534321 FN762-S Single Base Substitution C-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN3948-S.SNP.2:6537604 chr02:006537604 0 W/6537604-6537604 FN3948-S SNP A -> G AC=1;AN=168;BQB=0.99563;DP=2543;DP4=1095,1301,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14446e-12;MQSB=0.98568;RPB=0.875445;SGB=96.481;VDB=0.453088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.2:6547423 chr02:006547423 0 W/6547423-6547423 FN1552-S SNP A -> C AC=1;AN=188;BQB=0.286456;DP=4354;DP4=2098,2218,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000918695;MQB=2.60876e-05;MQSB=0.877806;RPB=0.900188;SGB=-70.6427;VDB=0.679586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.2:6550729 chr02:006550729 0 W/6550729-6550729 FN2704-S SNP T -> C AC=2;AN=200;BQB=0.394783;DP=4648;DP4=2411,1910,33,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.54068e-28;MQSB=0.965477;RPB=0.137498;SGB=72.0916;VDB=0.342684;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.2:6562611 chr02:006562611 0 W/6562611-6562611 FN857-S Single Base Substitution T-A INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2082-S.SNP.2:6562667 chr02:006562667 0 W/6562667-6562667 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.178666;DP=4178;DP4=2071,2059,20,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29788e-14;MQSB=0.925613;RPB=0.315845;SGB=-266.874;VDB=0.259389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.2:6563676 chr02:006563676 0 W/6563676-6563676 FN3746-S SNP T -> C AC=1;AN=190;BQB=0.475384;DP=2971;DP4=1370,1479,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08238e-12;MQSB=0.999979;RPB=0.994702;SGB=11.8805;VDB=0.524808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.2:6563681 chr02:006563681 0 W/6563681-6563681 FN3746-S SNP T -> A AC=1;AN=190;BQB=0.972256;DP=2968;DP4=1407,1460,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05425e-10;MQSB=0.980144;RPB=0.927453;SGB=62.7569;VDB=0.60362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.2:6575279 chr02:006575279 0 W/6575279-6575279 FN1278-S Single Base Substitution A-T INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3751-S.SNP.2:6577016 chr02:006577016 0 W/6577016-6577016 FN3751-S SNP G -> T AC=1;AN=190;BQB=0.999874;DP=3410;DP4=1801,1397,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10338e-05;MQSB=0.4087;RPB=0.657919;SGB=39.9877;VDB=0.619026;EFF=INTRON(MODIFIER||||307|LOC_Os02g12580|protein_coding|CODING|LOC_Os02g12580.1|1|1) FN3941-S.SNP.2:6577706 chr02:006577706 0 W/6577706-6577706 FN3941-S SNP C -> T AC=1;AN=168;BQB=0.993528;DP=3509;DP4=1843,1423,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.37698e-06;MQSB=0.665535;RPB=0.282936;SGB=43.3113;VDB=0.0593138;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN-144 Single Base Substitution T-C INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-67.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN-67 Single Base Substitution T-C INTRON HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN1031-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN1031-S Single Base Substitution T-C INTRON HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1401-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN1401-S Single Base Substitution T-C INTRON HOMO SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1492-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN1492-S Single Base Substitution T-C INTRON HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1702-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN1702-S SNP T -> C AC=2;AN=188;BQB=0.0599055;DP=4022;DP4=1846,2133,15,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.57911e-13;MQSB=0.99965;RPB=0.00396207;SGB=28.6876;VDB=0.566298;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN2173-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN2173-S SNP T -> C AC=2;AN=168;BQB=0.0635695;DP=4118;DP4=1953,2103,24,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.43621e-17;MQSB=0.926513;RPB=0.852968;SGB=47.1152;VDB=0.805468;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN2439.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN2439 SNP T -> C AC=1;AN=200;BQB=0.999053;DP=5363;DP4=2761,2337,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.44868e-09;MQSB=0.99531;RPB=0.730372;SGB=58.8698;VDB=0.788755;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN3564-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN3564-S SNP T -> C AC=1;AN=188;BQB=0.999997;DP=3091;DP4=1539,1478,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.53517e-11;MQSB=0.835245;RPB=0.943442;SGB=71.6954;VDB=0.52839;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN3787-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN3787-S SNP T -> C AC=2;AN=190;BQB=0.651275;DP=3008;DP4=1529,1335,25,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.86262e-18;MQSB=0.962721;RPB=0.616115;SGB=176.604;VDB=0.932127;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN3998-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN3998-S SNP T -> C AC=2;AN=168;BQB=0.686006;DP=2798;DP4=1394,1271,16,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.18962e-14;MQSB=0.987875;RPB=0.0650105;SGB=24.2221;VDB=0.422264;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN4189-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN4189-S SNP T -> C AC=2;AN=170;BQB=0.778956;DP=2838;DP4=1449,1286,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.45523e-10;MQSB=0.973149;RPB=0.889167;SGB=39.4251;VDB=0.786108;EFF=INTRON(MODIFIER||||74|LOC_Os02g12590|protein_coding|CODING|LOC_Os02g12590.1|1|1) FN432-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN432-S Single Base Substitution T-C INTRON HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN533-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN533-S Single Base Substitution T-C INTRON HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN626-S.SNP.2:6579241 chr02:006579241 0 W/6579241-6579241 FN626-S Single Base Substitution T-C INTRON HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2330.SNP.2:6579983 chr02:006579983 0 W/6579983-6579983 FN2330 SNP C -> T AC=2;AN=192;BQB=0.735827;DP=4801;DP4=2121,2351,28,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00020829;MQB=3.48648e-31;MQSB=0.997999;RPB=0.432266;SGB=68.3644;VDB=0.16834;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.2:6592097 chr02:006592097 0 W/6592097-6592097 FN_815-4-1 Single Base Substitution T-C Homo LOC_Os02g12630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN2310.SNP.2:6592312 chr02:006592312 0 W/6592312-6592312 FN2310 SNP C -> T AC=1;AN=192;BQB=0.37501;DP=4323;DP4=2234,1622,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000462642;MQB=1.63782e-07;MQSB=0.302881;RPB=0.650654;SGB=72.0322;VDB=0.81961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R123W|580|LOC_Os02g12630|protein_coding|CODING|LOC_Os02g12630.1|1|1) FN2094-S.SNP.2:6592664 chr02:006592664 0 W/6592664-6592664 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.419731;DP=1702;DP4=1108,515,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00235018;MQB=0.074946;MQSB=0.0694096;RPB=0.928497;SGB=-34.9514;VDB=0.889027;EFF=INTRON(MODIFIER||||580|LOC_Os02g12630|protein_coding|CODING|LOC_Os02g12630.1|1|1) W7-1-1.SNP.2:6594952 chr02:006594952 0 W/6594952-6594952 W7-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. W7-1-1.SNP.2:6594953 chr02:006594953 0 W/6594953-6594953 W7-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3756-S.SNP.2:6600191 chr02:006600191 0 W/6600191-6600191 FN3756-S SNP C -> G AC=1;AN=190;BQB=0.633945;DP=2596;DP4=1390,1108,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.99458e-07;MQSB=0.99994;RPB=0.777836;SGB=39.9877;VDB=0.770351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L95V|878|LOC_Os02g12650|protein_coding|CODING|LOC_Os02g12650.1|2|1),UTR_5_PRIME(MODIFIER||81||757|LOC_Os02g12650|protein_coding|CODING|LOC_Os02g12650.2|2|1) FN-263.SNP.2:6601304 chr02:006601304 0 W/6601304-6601304 FN-263 Single Base Substitution C-G SPLICE_SITE_REGION HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN999-S.SNP.2:6603447 chr02:006603447 0 W/6603447-6603447 FN999-S Single Base Substitution T-A INTRON HOMO SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN1042-S.SNP.2:6611548 chr02:006611548 0 W/6611548-6611548 FN1042-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g12660 protein kinase domain containing protein, putative, expressed SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2337.SNP.2:6614874 chr02:006614874 0 W/6614874-6614874 FN2337 SNP C -> T AC=1;AN=192;BQB=0.885661;DP=5424;DP4=2461,2663,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.08496e-05;MQSB=0.56266;RPB=0.367587;SGB=-37.5061;VDB=0.44269;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.2:6615250 chr02:006615250 0 W/6615250-6615250 FN3364-S SNP T -> A AC=1;AN=184;BQB=0.88006;DP=2571;DP4=1129,1365,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.61697e-05;MQSB=0.923504;RPB=0.686394;SGB=35.1773;VDB=0.662733;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.2:6619956 chr02:006619956 0 W/6619956-6619956 FN_N1-220-1 Single Base Substitution C-T HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN1096-S.SNP.2:6628306 chr02:006628306 0 W/6628306-6628306 FN1096-S Single Base Substitution T-G INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN428-S.SNP.2:6630619 chr02:006630619 0 W/6630619-6630619 FN428-S Single Base Substitution G-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN428-S.SNP.2:6630628 chr02:006630628 0 W/6630628-6630628 FN428-S Single Base Substitution C-G INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2182-S.SNP.2:6644228 chr02:006644228 0 W/6644228-6644228 FN2182-S SNP G -> T AC=1;AN=190;BQB=0.207843;DP=4115;DP4=1964,1888,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03485e-08;MQSB=0.33837;RPB=0.664616;SGB=53.8699;VDB=0.295676;EFF=UTR_3_PRIME(MODIFIER||234||467|LOC_Os02g12700|protein_coding|CODING|LOC_Os02g12700.1|1|1) FN1203-S.SNP.2:6658989 chr02:006658989 0 W/6658989-6658989 FN1203-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1197-S.SNP.2:6661286 chr02:006661286 0 W/6661286-6661286 FN1197-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2707-S.SNP.2:6661738 chr02:006661738 0 W/6661738-6661738 FN2707-S SNP T -> C AC=1;AN=200;BQB=0.348407;DP=5029;DP4=2155,2693,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15604e-06;MQSB=0.789336;RPB=0.69544;SGB=49.6594;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.2:6665147 chr02:006665147 0 W/6665147-6665147 FN3534-S SNP G -> A AC=2;AN=188;BQB=0.972899;DP=2478;DP4=1216,1215,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.01438e-12;MQSB=0.991325;RPB=0.290127;SGB=80.782;VDB=0.179329;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.2:6670131 chr02:006670131 0 W/6670131-6670131 FN1728-S SNP T -> A AC=1;AN=188;BQB=0.958631;DP=4005;DP4=1891,2062,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.98964e-11;MQSB=0.999089;RPB=0.984571;SGB=-39.6481;VDB=0.132505;EFF=INTRON(MODIFIER||||404|LOC_Os02g12740|protein_coding|CODING|LOC_Os02g12740.1|7|1) FN3512-S.SNP.2:6672860 chr02:006672860 0 W/6672860-6672860 FN3512-S SNP T -> C AC=1;AN=188;BQB=0.135252;DP=3231;DP4=1174,1815,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.39881e-05;MQSB=0.99998;RPB=0.481598;SGB=-35.081;VDB=0.986424;EFF=UTR_5_PRIME(MODIFIER||107||404|LOC_Os02g12740|protein_coding|CODING|LOC_Os02g12740.1|1|1) FN2300.SNP.2:6675929 chr02:006675929 0 W/6675929-6675929 FN2300 SNP G -> C AC=1;AN=192;BQB=0.795273;DP=4330;DP4=1782,2284,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03994e-09;MQSB=0.611871;RPB=0.854997;SGB=-14.7687;VDB=0.17304;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.2:6677207 chr02:006677207 0 W/6677207-6677207 FN909-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g12750 tetraspanin family protein, putative, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN1407-S.SNP.2:6690970 chr02:006690970 0 W/6690970-6690970 FN1407-S Single Base Substitution C-T INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1552-S.SNP.2:6695134 chr02:006695134 0 W/6695134-6695134 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.305196;DP=2646;DP4=1302,1318,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.44273e-05;MQSB=0.983021;RPB=0.966131;SGB=-2.17824;VDB=0.329216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E342K|524|LOC_Os02g12780|protein_coding|CODING|LOC_Os02g12780.1|3|1) FN1262-S.SNP.2:6697909 chr02:006697909 0 W/6697909-6697909 FN1262-S Single Base Substitution T-C INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1497-S.SNP.2:6709073 chr02:006709073 0 W/6709073-6709073 FN1497-S Single Base Substitution G-T INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3795-S.SNP.2:6715070 chr02:006715070 0 W/6715070-6715070 FN3795-S SNP C -> A AC=1;AN=190;BQB=0.492605;DP=2175;DP4=1015,1065,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00639678;MQSB=0.0234923;RPB=0.997795;SGB=25.439;VDB=0.672104;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.2:6718073 chr02:006718073 0 W/6718073-6718073 FN1150-S Single Base Substitution C-T INTRON HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1335-S.SNP.2:6718073 chr02:006718073 0 W/6718073-6718073 FN1335-S Single Base Substitution C-T INTRON HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1692-S.SNP.2:6718073 chr02:006718073 0 W/6718073-6718073 FN1692-S SNP C -> T AC=1;AN=188;BQB=0.121284;DP=4377;DP4=2314,2019,19,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.92805e-16;MQSB=0.928197;RPB=0.98391;SGB=-42.3883;VDB=0.99796;EFF=INTRON(MODIFIER||||252|LOC_Os02g12794|protein_coding|CODING|LOC_Os02g12794.3|2|1) FN3481-S.SNP.2:6718073 chr02:006718073 0 W/6718073-6718073 FN3481-S SNP C -> T AC=2;AN=184;BQB=0.7146;DP=2671;DP4=1336,1251,18,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.93235e-19;MQSB=0.885361;RPB=0.154359;SGB=106.184;VDB=0.0338716;EFF=INTRON(MODIFIER||||252|LOC_Os02g12794|protein_coding|CODING|LOC_Os02g12794.3|2|1) FN4240-S.SNP.2:6718073 chr02:006718073 0 W/6718073-6718073 FN4240-S SNP C -> T AC=2;AN=170;BQB=0.156909;DP=2619;DP4=1298,1246,21,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.64791e-16;MQSB=0.977379;RPB=0.0782085;SGB=117.502;VDB=0.559723;EFF=INTRON(MODIFIER||||252|LOC_Os02g12794|protein_coding|CODING|LOC_Os02g12794.3|2|1) FN1349-S.SNP.2:6727257 chr02:006727257 0 W/6727257-6727257 FN1349-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g12810 protein kinase domain containing protein, expressed SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. W443-5-1-3.SNP.2:6742199 chr02:006742199 0 W/6742199-6742199 W443-5-1-3 Single Base Substitution C-G INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2765-S.SNP.2:6747108 chr02:006747108 0 W/6747108-6747108 FN2765-S SNP A -> T AC=2;AN=198;BQB=0.861527;DP=2472;DP4=1673,614,18,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.48773e-13;MQSB=0.240351;RPB=0.727764;SGB=76.1002;VDB=0.386663;EFF=UTR_3_PRIME(MODIFIER||190||643|LOC_Os02g12820|protein_coding|CODING|LOC_Os02g12820.1|4|1) FN3751-S.SNP.2:6757748 chr02:006757748 0 W/6757748-6757748 FN3751-S SNP A -> G AC=1;AN=190;BQB=0.191567;DP=1846;DP4=674,1058,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0115215;MQSB=0.818667;RPB=0.203681;SGB=39.9877;VDB=0.494821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.2:6759371 chr02:006759371 0 W/6759371-6759371 FN2713-S SNP T -> C AC=1;AN=200;BQB=0.994567;DP=4789;DP4=2140,2389,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93853e-17;MQSB=0.999783;RPB=0.787043;SGB=101.557;VDB=0.344125;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.2:6760624 chr02:006760624 0 W/6760624-6760624 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN924-S.SNP.2:6763695 chr02:006763695 0 W/6763695-6763695 FN924-S Single Base Substitution G-A INTERGENIC HOMO SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2085-S.SNP.2:6764463 chr02:006764463 0 W/6764463-6764463 FN2085-S SNP A -> T AC=1;AN=168;BQB=0.108087;DP=3536;DP4=1635,1847,20,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.1505e-14;MQSB=0.96857;RPB=0.621749;SGB=-218.88;VDB=0.698793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.2:6769629 chr02:006769629 0 W/6769629-6769629 FN2080-S SNP C -> A AC=1;AN=168;BQB=0.134698;DP=3312;DP4=1765,1506,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86112e-05;MQSB=0.985038;RPB=0.599701;SGB=-60.2222;VDB=0.750627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.2:6770951 chr02:006770951 0 W/6770951-6770951 FN2665-S SNP A -> T AC=2;AN=200;BQB=0.941387;DP=4816;DP4=2359,2185,26,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.03195e-29;MQSB=0.909633;RPB=0.847369;SGB=10.4914;VDB=0.882074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.2:6795589 chr02:006795589 0 W/6795589-6795589 FN2750-S SNP G -> T AC=1;AN=200;BQB=0.292255;DP=5222;DP4=2421,2544,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.62587e-13;MQSB=0.990835;RPB=0.983848;SGB=42.5108;VDB=0.242182;EFF=INTERGENIC(MODIFIER||||||||||1) FN-23.SNP.2:6796794 chr02:006796794 0 W/6796794-6796794 FN-23 Single Base Substitution G-A INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN_829-2-5.SNP.2:6807487 chr02:006807487 0 W/6807487-6807487 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN468-S.SNP.2:6819755 chr02:006819755 0 W/6819755-6819755 FN468-S Single Base Substitution G-C INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1757-S.SNP.2:6825710 chr02:006825710 0 W/6825710-6825710 FN1757-S SNP C -> A AC=2;AN=188;BQB=0.999074;DP=3118;DP4=1172,1861,10,30;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=5.23539e-14;MQSB=0.306563;RPB=0.858922;SGB=-135.575;VDB=0.203129;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.2:6825711 chr02:006825711 0 W/6825711-6825711 FN1757-S SNP G -> A AC=2;AN=188;BQB=0.706002;DP=3112;DP4=1183,1850,12,26;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=2.08006e-16;MQSB=0.369573;RPB=0.984214;SGB=-88.1232;VDB=0.0884512;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.2:6826952 chr02:006826952 0 W/6826952-6826952 FN1366-S Single Base Substitution A-G INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2172-S.SNP.2:6828217 chr02:006828217 0 W/6828217-6828217 FN2172-S SNP A -> G AC=2;AN=168;BQB=0.0365314;DP=3232;DP4=1409,1756,22,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000309406;MQB=4.9789e-13;MQSB=0.219629;RPB=0.919969;SGB=68.3702;VDB=0.0270665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.2:6828613 chr02:006828613 0 W/6828613-6828613 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.296697;DP=3794;DP4=1641,1911,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000527148;MQB=7.18398e-10;MQSB=0.866831;RPB=0.999704;SGB=47.3393;VDB=0.151907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.2:6828614 chr02:006828614 0 W/6828614-6828614 FN2536-S SNP A -> T AC=1;AN=198;BQB=0.621909;DP=3824;DP4=1732,1883,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000784519;MQB=8.88368e-11;MQSB=0.995538;RPB=0.86696;SGB=54.5295;VDB=0.0326441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.2:6830149 chr02:006830149 0 W/6830149-6830149 FN1366-S Single Base Substitution G-T INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2202-S.SNP.2:6838278 chr02:006838278 0 W/6838278-6838278 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.612431;DP=5066;DP4=2576,2112,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22144e-14;MQSB=0.928472;RPB=0.667272;SGB=-41.6779;VDB=0.351687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.2:6841722 chr02:006841722 0 W/6841722-6841722 FN2184-S SNP G -> A AC=1;AN=190;BQB=0.843774;DP=1607;DP4=392,972,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00084525;MQSB=2.46819e-11;RPB=0.367184;SGB=26.3271;VDB=0.116635;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.2:6841754 chr02:006841754 0 W/6841754-6841754 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.402703;DP=1052;DP4=243,765,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00200871;MQSB=0.686629;RPB=0.721824;SGB=18.2682;VDB=0.928906;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.2:6858788 chr02:006858788 0 W/6858788-6858788 FN794-S Single Base Substitution C-T INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN4160-S.SNP.2:6862319 chr02:006862319 0 W/6862319-6862319 FN4160-S SNP A -> G AC=2;AN=170;BQB=0.999832;DP=2545;DP4=1331,1156,14,12;HOB=0.0232526;ICB=0.494188;MQ=31;MQ0F=0.0227898;MQB=0.751363;MQSB=1.98867e-25;RPB=0.667144;SGB=110.069;VDB=0.0545711;EFF=INTRON(MODIFIER||||1310|LOC_Os02g12970|protein_coding|CODING|LOC_Os02g12970.1|1|1) FN1385-S.SNP.2:6866232 chr02:006866232 0 W/6866232-6866232 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-217.SNP.2:6868308 chr02:006868308 0 W/6868308-6868308 FN-217 Single Base Substitution C-T INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN445-S.SNP.2:6870888 chr02:006870888 0 W/6870888-6870888 FN445-S Single Base Substitution A-G INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2464.SNP.2:6897736 chr02:006897736 0 W/6897736-6897736 FN2464 SNP C -> T AC=1;AN=200;BQB=0.842655;DP=7316;DP4=3567,3321,8,9;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.204347;MQB=0.165513;MQSB=0.00230626;RPB=0.973858;SGB=29.4849;VDB=0.100443;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.2:6897894 chr02:006897894 0 W/6897894-6897894 FN1412-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2268-S.SNP.2:6913693 chr02:006913693 0 W/6913693-6913693 FN2268-S SNP A -> G AC=1;AN=190;BQB=0.947145;DP=4837;DP4=2423,2049,19,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.25417e-20;MQSB=0.838484;RPB=0.59565;SGB=167.496;VDB=0.897512;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.2:6922808 chr02:006922808 0 W/6922808-6922808 FN588-S Single Base Substitution C-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN934-S.SNP.2:6932660 chr02:006932660 0 W/6932660-6932660 FN934-S Single Base Substitution G-T INTERGENIC HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2617-S.SNP.2:6940195 chr02:006940195 0 W/6940195-6940195 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.659254;DP=4131;DP4=1743,2147,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26082e-15;MQSB=0.948949;RPB=0.474376;SGB=50.1053;VDB=0.417724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.2:6940433 chr02:006940433 0 W/6940433-6940433 FN2097-S SNP T -> C AC=2;AN=168;BQB=0.374615;DP=3575;DP4=1885,1600,35,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.3157e-28;MQSB=0.731411;RPB=0.71811;SGB=3.58342;VDB=0.936372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.2:6940877 chr02:006940877 0 W/6940877-6940877 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.976571;DP=3955;DP4=2016,1880,20,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.66174e-19;MQSB=0.944576;RPB=0.400173;SGB=-201.44;VDB=0.0538659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.2:6943324 chr02:006943324 0 W/6943324-6943324 FN3763-S SNP G -> A AC=1;AN=190;BQB=0.918363;DP=2635;DP4=1179,1326,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.90285e-09;MQSB=0.711833;RPB=0.628156;SGB=58.2031;VDB=0.570811;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.2:6943497 chr02:006943497 0 W/6943497-6943497 FN2261-S SNP T -> C AC=1;AN=190;BQB=0.952711;DP=4728;DP4=2201,2267,23,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.37395e-24;MQSB=0.880521;RPB=0.90485;SGB=149.825;VDB=0.96743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2104-S.SNP.2:6943525 chr02:006943525 0 W/6943525-6943525 FN2104-S SNP A -> T AC=2;AN=168;BQB=0.452473;DP=3796;DP4=1907,1843,22,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61621e-13;MQSB=0.639112;RPB=0.898477;SGB=-82.1908;VDB=0.355891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.2:6947127 chr02:006947127 0 W/6947127-6947127 FN3675-S SNP A -> G AC=2;AN=190;BQB=0.974949;DP=2624;DP4=1287,1259,8,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.97297e-14;MQSB=0.988218;RPB=0.635173;SGB=78.7471;VDB=0.167881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:6951249 chr02:006951249 0 W/6951249-6951249 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.808344;DP=5032;DP4=2236,2424,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06955e-10;MQSB=0.95035;RPB=0.788538;SGB=63.4749;VDB=0.539953;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.2:6959844 chr02:006959844 0 W/6959844-6959844 FN1519-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3471-S.SNP.2:6960429 chr02:006960429 0 W/6960429-6960429 FN3471-S SNP A -> G AC=1;AN=184;BQB=0.981434;DP=2801;DP4=1374,1304,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.93342e-12;MQSB=0.947623;RPB=0.600046;SGB=93.9603;VDB=0.899174;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.2:6963579 chr02:006963579 0 W/6963579-6963579 FN4113-S SNP C -> A AC=1;AN=182;BQB=0.981609;DP=3216;DP4=1596,1523,16,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.14522e-18;MQSB=0.977688;RPB=0.461248;SGB=143.35;VDB=0.868246;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.2:6975627 chr02:006975627 0 W/6975627-6975627 W554-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3395-S.SNP.2:6979071 chr02:006979071 0 W/6979071-6979071 FN3395-S SNP T -> C AC=1;AN=184;BQB=0.991497;DP=2696;DP4=1199,1327,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36128e-05;MQSB=0.717268;RPB=0.754765;SGB=39.699;VDB=0.397567;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.2:6986757 chr02:006986757 0 W/6986757-6986757 FN898-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g13140 xaa-Pro dipeptidase, putative, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN926-S.SNP.2:6988896 chr02:006988896 0 W/6988896-6988896 FN926-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g13140 xaa-Pro dipeptidase, putative, expressed SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2546-S.SNP.2:6995124 chr02:006995124 0 W/6995124-6995124 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.575192;DP=3233;DP4=1697,1336,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.51235e-05;MQSB=0.99778;RPB=0.123668;SGB=14.9842;VDB=0.132938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.2:6996614 chr02:006996614 0 W/6996614-6996614 FN1763-S SNP T -> C AC=2;AN=188;BQB=0.987779;DP=3876;DP4=2014,1808,22,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.13323e-18;MQSB=0.999137;RPB=0.899917;SGB=96.2203;VDB=0.14388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.2:7001518 chr02:007001518 0 W/7001518-7001518 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.991583;DP=2850;DP4=1217,1561,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14462e-09;MQSB=0.905503;RPB=0.972285;SGB=62.3078;VDB=0.966342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.2:7007985 chr02:007007985 0 W/7007985-7007985 FN2587-S SNP T -> A AC=1;AN=198;BQB=0.820659;DP=3904;DP4=2018,1698,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.29351e-13;MQSB=0.99222;RPB=0.360881;SGB=50.1053;VDB=0.340203;EFF=INTRON(MODIFIER||||348|LOC_Os02g13150|protein_coding|CODING|LOC_Os02g13150.1|1|1) FN3803-S.SNP.2:7019489 chr02:007019489 0 W/7019489-7019489 FN3803-S SNP C -> G AC=1;AN=190;BQB=0.720262;DP=2964;DP4=1825,965,18,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70414e-16;MQSB=0.998551;RPB=0.654289;SGB=78.7471;VDB=0.688932;EFF=INTRON(MODIFIER||||610|LOC_Os02g13170|protein_coding|CODING|LOC_Os02g13170.1|5|1) FN3803-S.SNP.2:7019490 chr02:007019490 0 W/7019490-7019490 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.947379;DP=2965;DP4=1824,956,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01388e-15;MQSB=0.997786;RPB=0.71993;SGB=103.742;VDB=0.701077;EFF=INTRON(MODIFIER||||610|LOC_Os02g13170|protein_coding|CODING|LOC_Os02g13170.1|5|1) FN1458-S.SNP.2:7023269 chr02:007023269 0 W/7023269-7023269 FN1458-S Single Base Substitution C-T INTRON HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1176-S.SNP.2:7025298 chr02:007025298 0 W/7025298-7025298 FN1176-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g13180 SKP1, putative, expressed SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1535-S.SNP.2:7034771 chr02:007034771 0 W/7034771-7034771 FN1535-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1535-S.SNP.2:7034772 chr02:007034772 0 W/7034772-7034772 FN1535-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1515-S.SNP.2:7035881 chr02:007035881 0 W/7035881-7035881 FN1515-S Single Base Substitution T-A INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2139-S.SNP.2:7037074 chr02:007037074 0 W/7037074-7037074 FN2139-S SNP G -> A AC=1;AN=168;BQB=0.983592;DP=2402;DP4=1161,1188,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.88946e-07;MQSB=0.994434;RPB=0.641829;SGB=1.32907;VDB=0.404278;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.2:7037951 chr02:007037951 0 W/7037951-7037951 FN1277-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2119-S.SNP.2:7044554 chr02:007044554 0 W/7044554-7044554 FN2119-S SNP G -> A AC=1;AN=168;BQB=0.446402;DP=3062;DP4=1193,1803,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.10903e-11;MQSB=0.984759;RPB=0.993835;SGB=-71.2065;VDB=0.821978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.2:7045062 chr02:007045062 0 W/7045062-7045062 FN2681-S SNP C -> G AC=1;AN=200;BQB=0.80513;DP=4307;DP4=2216,1774,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29688e-19;MQSB=0.860778;RPB=0.999159;SGB=108.768;VDB=0.660784;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A347|435|LOC_Os02g13220|protein_coding|CODING|LOC_Os02g13220.1|1|1) FN2327.SNP.2:7062350 chr02:007062350 0 W/7062350-7062350 FN2327 SNP T -> G AC=1;AN=192;BQB=0.945804;DP=4943;DP4=2047,2693,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.33504e-08;MQSB=0.97113;RPB=0.751539;SGB=16.0922;VDB=0.548795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.2:7064886 chr02:007064886 0 W/7064886-7064886 FN3447-S SNP T -> C AC=1;AN=184;BQB=0.932576;DP=2774;DP4=1301,1412,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35944e-06;MQSB=0.910073;RPB=0.505373;SGB=21.6609;VDB=0.111658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.2:7075629 chr02:007075629 0 W/7075629-7075629 FN2105-S SNP C -> T AC=2;AN=168;BQB=0.757632;DP=4117;DP4=2480,1560,36,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.1316e-24;MQSB=0.999694;RPB=0.549355;SGB=-287.418;VDB=0.462064;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.2:7080881 chr02:007080881 0 W/7080881-7080881 W278-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2327.SNP.2:7087110 chr02:007087110 0 W/7087110-7087110 FN2327 SNP A -> T AC=1;AN=192;BQB=0.841464;DP=5054;DP4=2430,2237,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.61805e-11;MQSB=0.991381;RPB=0.349406;SGB=-11.3826;VDB=0.136186;EFF=UTR_3_PRIME(MODIFIER||93||342|LOC_Os02g13300|protein_coding|CODING|LOC_Os02g13300.1|7|1),UTR_3_PRIME(MODIFIER||93||242|LOC_Os02g13300|protein_coding|CODING|LOC_Os02g13300.2|7|1) FN2327.SNP.2:7087111 chr02:007087111 0 W/7087111-7087111 FN2327 SNP C -> T AC=1;AN=192;BQB=0.913972;DP=5042;DP4=2455,2314,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.27901e-15;MQSB=0.999244;RPB=0.715282;SGB=-38.3774;VDB=0.0539526;EFF=UTR_3_PRIME(MODIFIER||94||342|LOC_Os02g13300|protein_coding|CODING|LOC_Os02g13300.1|7|1),UTR_3_PRIME(MODIFIER||94||242|LOC_Os02g13300|protein_coding|CODING|LOC_Os02g13300.2|7|1) FN2429.SNP.2:7092403 chr02:007092403 0 W/7092403-7092403 FN2429 SNP G -> T AC=1;AN=200;BQB=0.921893;DP=4732;DP4=1986,2381,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.21388e-17;MQSB=0.747293;RPB=0.201224;SGB=33.5675;VDB=0.59219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.2:7100450 chr02:007100450 0 W/7100450-7100450 FN2140-S SNP A -> C AC=1;AN=168;BQB=0.0219425;DP=3689;DP4=2022,1591,21,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58115e-11;MQSB=0.744884;RPB=0.418064;SGB=-128.892;VDB=0.401514;EFF=UTR_3_PRIME(MODIFIER||329||539|LOC_Os02g13310|protein_coding|CODING|LOC_Os02g13310.1|5|1) FN3301-S.SNP.2:7102896 chr02:007102896 0 W/7102896-7102896 FN3301-S SNP A -> G AC=2;AN=184;BQB=0.953508;DP=2733;DP4=1253,1341,7,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.22072e-09;MQSB=0.8082;RPB=0.977966;SGB=71.3514;VDB=0.834989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.2:7108361 chr02:007108361 0 W/7108361-7108361 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2731-S.SNP.2:7112070 chr02:007112070 0 W/7112070-7112070 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.109831;DP=4794;DP4=2498,1980,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27869e-11;MQSB=0.923854;RPB=0.997097;SGB=-10.6896;VDB=0.459448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:7113972 chr02:007113972 0 W/7113972-7113972 FN2668-S SNP G -> C AC=1;AN=200;BQB=0.858647;DP=4936;DP4=2012,2635,11,27;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.34583e-25;MQSB=0.691982;RPB=0.363548;SGB=126.794;VDB=0.418507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:7113975 chr02:007113975 0 W/7113975-7113975 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.854932;DP=4901;DP4=1983,2605,11,28;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03577e-22;MQSB=0.65558;RPB=0.433682;SGB=43.1985;VDB=0.46176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:7113979 chr02:007113979 0 W/7113979-7113979 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.867656;DP=4900;DP4=1944,2611,11,27;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19325e-24;MQSB=0.689639;RPB=0.925084;SGB=126.794;VDB=0.429691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.2:7117342 chr02:007117342 0 W/7117342-7117342 FN2308 SNP G -> A AC=2;AN=192;BQB=0.838709;DP=5049;DP4=2532,2174,30,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.64514e-28;MQSB=0.935378;RPB=0.286792;SGB=123.795;VDB=0.616355;EFF=INTRON(MODIFIER||||637|LOC_Os02g13340|protein_coding|CODING|LOC_Os02g13340.1|1|1) FN-342.SNP.2:7126357 chr02:007126357 0 W/7126357-7126357 FN-342 Single Base Substitution T-A UTR_3_PRIME HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3695-S.SNP.2:7131020 chr02:007131020 0 W/7131020-7131020 FN3695-S SNP C -> T AC=1;AN=190;BQB=0.526232;DP=2467;DP4=1245,1115,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74938e-06;MQSB=0.99593;RPB=0.439248;SGB=62.7569;VDB=0.146648;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A495V|543|LOC_Os02g13360|protein_coding|CODING|LOC_Os02g13360.1|11|1) FN2540-S.SNP.2:7132079 chr02:007132079 0 W/7132079-7132079 FN2540-S SNP G -> T AC=1;AN=198;BQB=0.713184;DP=4334;DP4=2220,1952,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50693e-08;MQSB=0.998405;RPB=0.736325;SGB=63.3342;VDB=0.78749;EFF=UTR_3_PRIME(MODIFIER||81||235|LOC_Os02g13370|protein_coding|CODING|LOC_Os02g13370.1|2|1),UTR_3_PRIME(MODIFIER||768||543|LOC_Os02g13360|protein_coding|CODING|LOC_Os02g13360.1|13|1) FN2608-S.SNP.2:7135924 chr02:007135924 0 W/7135924-7135924 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.997546;DP=4057;DP4=1944,1946,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8139e-07;MQSB=0.952827;RPB=0.982071;SGB=63.3342;VDB=0.64794;EFF=INTRON(MODIFIER||||154|LOC_Os02g13380|protein_coding|CODING|LOC_Os02g13380.1|3|1) FN-85.SNP.2:7138409 chr02:007138409 0 W/7138409-7138409 FN-85 Single Base Substitution C-A INTERGENIC HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2379.SNP.2:7145044 chr02:007145044 0 W/7145044-7145044 FN2379 SNP G -> A AC=1;AN=192;BQB=0.00357127;DP=4408;DP4=2155,1882,19,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.92375e-13;MQSB=0.357217;RPB=0.565924;SGB=135.933;VDB=0.0329204;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K11|610|LOC_Os02g13400|protein_coding|CODING|LOC_Os02g13400.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K11|610|LOC_Os02g13400|protein_coding|CODING|LOC_Os02g13400.2|1|1) FN-362.SNP.2:7145828 chr02:007145828 0 W/7145828-7145828 FN-362 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g13400 expressed protein SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN-160.SNP.2:7153420 chr02:007153420 0 W/7153420-7153420 FN-160 Single Base Substitution A-G INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2725-S.SNP.2:7171336 chr02:007171336 0 W/7171336-7171336 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.92272;DP=4200;DP4=1994,2026,15,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.40558e-19;MQSB=0.996764;RPB=0.999119;SGB=108.768;VDB=0.248823;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.2:7173494 chr02:007173494 0 W/7173494-7173494 FN480-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN-138.SNP.2:7175709 chr02:007175709 0 W/7175709-7175709 FN-138 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g13430 receptor-like protein kinase 5 precursor, putative, expressed SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN1461-S.SNP.2:7181565 chr02:007181565 0 W/7181565-7181565 FN1461-S Single Base Substitution C-T INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN229-S.SNP.2:7185744 chr02:007185744 0 W/7185744-7185744 FN229-S Single Base Substitution T-G INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN369-S.SNP.2:7189071 chr02:007189071 0 W/7189071-7189071 FN369-S Single Base Substitution C-G INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN2494.SNP.2:7195698 chr02:007195698 0 W/7195698-7195698 FN2494 SNP C -> T AC=1;AN=200;BQB=0.525082;DP=4936;DP4=2371,2313,12,16;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0931929;MQB=0.0703412;MQSB=2.59857e-08;RPB=0.440675;SGB=90.7419;VDB=0.502902;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L644|1794|LOC_Os02g13470|protein_coding|CODING|LOC_Os02g13470.1|4|1) FN4141-S.SNP.2:7195801 chr02:007195801 0 W/7195801-7195801 FN4141-S SNP G -> A AC=1;AN=170;BQB=0.999979;DP=3411;DP4=1686,1655,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0697743;MQB=0.506385;MQSB=0.0318336;RPB=0.438695;SGB=48.6486;VDB=0.83796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P610L|1794|LOC_Os02g13470|protein_coding|CODING|LOC_Os02g13470.1|4|1) FN_814-7-1.SNP.2:7203446 chr02:007203446 0 W/7203446-7203446 FN_814-7-1 Single Base Substitution G-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2289.SNP.2:7211217 chr02:007211217 0 W/7211217-7211217 FN2289 SNP A -> G AC=1;AN=192;BQB=0.899494;DP=4930;DP4=2176,2017,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58613e-11;MQSB=0.0525966;RPB=0.944602;SGB=22.9983;VDB=0.571732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.2:7211381 chr02:007211381 0 W/7211381-7211381 FN2594-S SNP C -> T AC=1;AN=198;BQB=0.99885;DP=3948;DP4=2157,1569,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000253293;MQB=5.40994e-06;MQSB=0.533424;RPB=0.721811;SGB=35.7638;VDB=0.251355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.2:7211580 chr02:007211580 0 W/7211580-7211580 FN2356 SNP A -> T AC=2;AN=192;BQB=0.120148;DP=4844;DP4=1705,2271,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.37216e-18;MQSB=0.287446;RPB=0.193986;SGB=105.844;VDB=0.411715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.2:7212026 chr02:007212026 0 W/7212026-7212026 FN1089-S Single Base Substitution T-C INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1192-S.SNP.2:7212547 chr02:007212547 0 W/7212547-7212547 FN1192-S Single Base Substitution T-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3385-S.SNP.2:7217475 chr02:007217475 0 W/7217475-7217475 FN3385-S SNP A -> G AC=1;AN=184;BQB=0.953143;DP=3089;DP4=1224,1752,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.84545e-08;MQSB=0.44444;RPB=0.58092;SGB=48.7425;VDB=0.614492;EFF=INTRON(MODIFIER||||639|LOC_Os02g13500|protein_coding|CODING|LOC_Os02g13500.1|2|1) FN3430-S.SNP.2:7219029 chr02:007219029 0 W/7219029-7219029 FN3430-S SNP T -> G AC=2;AN=184;BQB=0.81722;DP=3768;DP4=2134,1392,24,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.04103e-21;MQSB=0.816725;RPB=0.993147;SGB=78.7544;VDB=0.560171;EFF=INTRON(MODIFIER||||639|LOC_Os02g13500|protein_coding|CODING|LOC_Os02g13500.1|1|1) FN2331.SNP.2:7225691 chr02:007225691 0 W/7225691-7225691 FN2331 SNP G -> A AC=1;AN=192;BQB=0.0320653;DP=4563;DP4=2166,2104,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.25083e-05;MQSB=0.830909;RPB=0.631809;SGB=-16.4617;VDB=0.0889066;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.2:7227441 chr02:007227441 0 W/7227441-7227441 FN4107-S SNP C -> A AC=1;AN=182;BQB=0.954295;DP=2687;DP4=1352,1281,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.72137e-07;MQSB=0.916459;RPB=0.86097;SGB=53.1331;VDB=0.736622;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.2:7228280 chr02:007228280 0 W/7228280-7228280 FN-144 Single Base Substitution A-G INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN669-S.SNP.2:7228817 chr02:007228817 0 W/7228817-7228817 FN669-S Single Base Substitution C-A INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1690-S.SNP.2:7237161 chr02:007237161 0 W/7237161-7237161 FN1690-S SNP A -> G AC=1;AN=188;BQB=0.249272;DP=3858;DP4=2165,1656,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55501e-07;MQSB=0.999597;RPB=0.871943;SGB=11.7114;VDB=0.266887;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.2:7240869 chr02:007240869 0 W/7240869-7240869 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. 707-2.SNP.2:7242924 chr02:007242924 0 W/7242924-7242924 707-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. FN4224-S.SNP.2:7244836 chr02:007244836 0 W/7244836-7244836 FN4224-S SNP A -> G AC=1;AN=170;BQB=0.989738;DP=2314;DP4=1100,1084,4,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.47811e-08;MQSB=0.944336;RPB=0.145776;SGB=41.7633;VDB=0.15905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.2:7245356 chr02:007245356 0 W/7245356-7245356 FN3476-S SNP A -> T AC=1;AN=184;BQB=0.977701;DP=2498;DP4=1180,1242,16,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.87586e-17;MQSB=0.99195;RPB=0.0837795;SGB=116.569;VDB=0.368431;EFF=INTRON(MODIFIER||||300|LOC_Os02g13520|protein_coding|CODING|LOC_Os02g13520.1|5|1) FN421-S.SNP.2:7245792 chr02:007245792 0 W/7245792-7245792 FN421-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g13520 OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN4255-S.SNP.2:7251110 chr02:007251110 0 W/7251110-7251110 FN4255-S SNP C -> A AC=1;AN=170;BQB=0.984639;DP=2398;DP4=1014,1248,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.14908e-11;MQSB=0.880192;RPB=0.802205;SGB=52.0913;VDB=0.807779;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.2:7253270 chr02:007253270 0 W/7253270-7253270 FN869-S Single Base Substitution T-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN462-S.SNP.2:7254042 chr02:007254042 0 W/7254042-7254042 FN462-S Single Base Substitution C-T INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN4166-S.SNP.2:7254068 chr02:007254068 0 W/7254068-7254068 FN4166-S SNP G -> T AC=2;AN=170;BQB=0.919624;DP=2124;DP4=1007,1029,6,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.98237e-07;MQSB=0.997451;RPB=0.992864;SGB=41.7633;VDB=0.990619;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.2:7254139 chr02:007254139 0 W/7254139-7254139 FN885-S Single Base Substitution G-A INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN754-S.SNP.2:7255738 chr02:007255738 0 W/7255738-7255738 FN754-S Single Base Substitution C-G INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2706-S.SNP.2:7257335 chr02:007257335 0 W/7257335-7257335 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.718416;DP=4440;DP4=2052,2117,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09267e-06;MQSB=0.735089;RPB=0.974829;SGB=63.4749;VDB=0.479047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.2:7265938 chr02:007265938 0 W/7265938-7265938 FN2221-S SNP T -> A AC=1;AN=190;BQB=0.99421;DP=4731;DP4=2402,2064,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89816e-10;MQSB=0.188088;RPB=0.863647;SGB=50.3161;VDB=0.971217;EFF=UTR_3_PRIME(MODIFIER||653||144|LOC_Os02g13555|protein_coding|CODING|LOC_Os02g13555.1|1|1) FN1467-S.SNP.2:7267084 chr02:007267084 0 W/7267084-7267084 FN1467-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2477.SNP.2:7270807 chr02:007270807 0 W/7270807-7270807 FN2477 SNP C -> T AC=1;AN=200;BQB=0.479969;DP=4983;DP4=2297,2318,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07042e-08;MQSB=0.911252;RPB=0.0602418;SGB=-13.1102;VDB=0.624965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.2:7279088 chr02:007279088 0 W/7279088-7279088 FN3531-S SNP G -> A AC=2;AN=188;BQB=0.996163;DP=2699;DP4=1408,1180,4,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.87329e-08;MQSB=0.974092;RPB=0.493495;SGB=15.903;VDB=0.239031;EFF=INTRON(MODIFIER||||348|LOC_Os02g13570|protein_coding|CODING|LOC_Os02g13570.1|5|1) FN3531-S.SNP.2:7279089 chr02:007279089 0 W/7279089-7279089 FN3531-S SNP G -> A AC=2;AN=188;BQB=0.903639;DP=2714;DP4=1416,1194,3,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.32438e-07;MQSB=0.933658;RPB=0.300198;SGB=44.4357;VDB=0.0288938;EFF=INTRON(MODIFIER||||348|LOC_Os02g13570|protein_coding|CODING|LOC_Os02g13570.1|5|1) FN2638-S.SNP.2:7280124 chr02:007280124 0 W/7280124-7280124 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.698389;DP=5112;DP4=2293,2514,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.88507e-13;MQSB=0.982874;RPB=0.978158;SGB=91.1059;VDB=0.95381;EFF=INTRON(MODIFIER||||348|LOC_Os02g13570|protein_coding|CODING|LOC_Os02g13570.1|3|1) FN3948-S.SNP.2:7282322 chr02:007282322 0 W/7282322-7282322 FN3948-S SNP A -> G AC=1;AN=168;BQB=0.672304;DP=2456;DP4=1148,1198,9,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.25979e-12;MQSB=0.825821;RPB=0.997742;SGB=82.7794;VDB=0.0626915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I787T|997|LOC_Os02g13580|protein_coding|CODING|LOC_Os02g13580.1|9|1) W674-4-1.SNP.2:7285673 chr02:007285673 0 W/7285673-7285673 W674-4-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN1550-S.SNP.2:7286339 chr02:007286339 0 W/7286339-7286339 FN1550-S Single Base Substitution C-T INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1219-S.SNP.2:7301387 chr02:007301387 0 W/7301387-7301387 FN1219-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g13600 expressed protein SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2626-S.SNP.2:7310876 chr02:007310876 0 W/7310876-7310876 FN2626-S SNP A -> G AC=1;AN=200;BQB=0.926482;DP=4061;DP4=1930,1913,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.673e-07;MQSB=0.561595;RPB=0.967007;SGB=54.2646;VDB=0.908313;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R153G|190|LOC_Os02g13620|protein_coding|CODING|LOC_Os02g13620.1|1|1) FN3593-S.SNP.2:7313400 chr02:007313400 0 W/7313400-7313400 FN3593-S SNP G -> T AC=1;AN=190;BQB=0.567832;DP=2362;DP4=1480,773,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000378594;MQSB=0.0889335;RPB=0.739343;SGB=5.78296;VDB=0.876455;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.2:7317096 chr02:007317096 0 W/7317096-7317096 FN884-S Single Base Substitution A-T INTRON HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN2195-S.SNP.2:7319606 chr02:007319606 0 W/7319606-7319606 FN2195-S SNP T -> A AC=1;AN=190;BQB=0.349233;DP=5301;DP4=2392,2457,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.08748e-09;MQSB=0.948274;RPB=0.904749;SGB=36.4291;VDB=0.325947;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.2:7320621 chr02:007320621 0 W/7320621-7320621 FN893-S Single Base Substitution C-T INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN229-S.SNP.2:7325345 chr02:007325345 0 W/7325345-7325345 FN229-S Single Base Substitution C-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN3858-S.SNP.2:7338455 chr02:007338455 0 W/7338455-7338455 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.895645;DP=2450;DP4=1205,1145,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.06292e-06;MQSB=0.941929;RPB=0.445083;SGB=55.806;VDB=0.864675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.2:7352560 chr02:007352560 0 W/7352560-7352560 FN1024-S Single Base Substitution G-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN703-S.SNP.2:7354673 chr02:007354673 0 W/7354673-7354673 FN703-S Single Base Substitution G-A INTERGENIC HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN1045-S.SNP.2:7356290 chr02:007356290 0 W/7356290-7356290 FN1045-S Single Base Substitution T-A INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3415-S.SNP.2:7371693 chr02:007371693 0 W/7371693-7371693 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.967471;DP=2226;DP4=1276,853,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61122e-05;MQSB=0.99815;RPB=0.978347;SGB=30.6558;VDB=0.901249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.2:7372776 chr02:007372776 0 W/7372776-7372776 FN3924-S SNP A -> G AC=1;AN=158;BQB=0.991069;DP=2401;DP4=1151,1112,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.36202e-08;MQSB=0.9917;RPB=0.199549;SGB=55.806;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.2:7374601 chr02:007374601 0 W/7374601-7374601 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2404.SNP.2:7374812 chr02:007374812 0 W/7374812-7374812 FN2404 SNP C -> G AC=2;AN=200;BQB=0.379933;DP=4767;DP4=2607,1822,31,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000209776;MQB=5.02174e-34;MQSB=0.591565;RPB=0.434096;SGB=220.528;VDB=0.333042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.2:7376429 chr02:007376429 0 W/7376429-7376429 FN3519-S SNP C -> T AC=2;AN=188;BQB=0.629977;DP=3050;DP4=1255,1706,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.16157e-10;MQSB=0.990745;RPB=0.7729;SGB=89.8686;VDB=0.26618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.2:7381372 chr02:007381372 0 W/7381372-7381372 FN1106-S Single Base Substitution A-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1106-S.SNP.2:7381373 chr02:007381373 0 W/7381373-7381373 FN1106-S Single Base Substitution C-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2703-S.SNP.2:7384544 chr02:007384544 0 W/7384544-7384544 FN2703-S SNP A -> G AC=1;AN=200;BQB=0.420637;DP=4951;DP4=2513,2203,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.73996e-19;MQSB=0.797742;RPB=0.790789;SGB=68.5625;VDB=0.0569384;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.2:7389082 chr02:007389082 0 W/7389082-7389082 FN1292-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g13730 retrotransposon protein, putative, unclassified, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1531-S.SNP.2:7392008 chr02:007392008 0 W/7392008-7392008 FN1531-S Single Base Substitution T-C INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2130-S.SNP.2:7392792 chr02:007392792 0 W/7392792-7392792 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.0124662;DP=2794;DP4=978,1790,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00572656;MQB=0.410372;MQSB=1.11997e-15;RPB=0.923129;SGB=-58.653;VDB=0.966132;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.2:7393273 chr02:007393273 0 W/7393273-7393273 FN1723-S SNP A -> G AC=1;AN=188;BQB=0.0281088;DP=4375;DP4=2048,2289,12,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.73141e-13;MQSB=0.647028;RPB=0.999953;SGB=-120.834;VDB=0.703391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.2:7394850 chr02:007394850 0 W/7394850-7394850 FN1426-S Single Base Substitution T-C INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1682-S.SNP.2:7398698 chr02:007398698 0 W/7398698-7398698 FN1682-S SNP A -> T AC=1;AN=188;BQB=0.0011438;DP=3444;DP4=1738,1620,23,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16873e-07;MQSB=0.965781;RPB=0.96419;SGB=-421.849;VDB=0.0197426;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.2:7400195 chr02:007400195 0 W/7400195-7400195 FN4201-S SNP G -> T AC=2;AN=170;BQB=0.552143;DP=2542;DP4=1198,1217,15,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.95983e-16;MQSB=0.926412;RPB=0.240745;SGB=66.2943;VDB=0.629153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.2:7400880 chr02:007400880 0 W/7400880-7400880 FN3510-S SNP C -> A AC=1;AN=188;BQB=0.961146;DP=2522;DP4=1050,1368,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.57445e-10;MQSB=0.910564;RPB=0.928702;SGB=76.2387;VDB=0.631057;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.2:7404383 chr02:007404383 0 W/7404383-7404383 FN4126-S SNP T -> C AC=1;AN=182;BQB=0.848049;DP=2758;DP4=1406,1268,3,3;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.000725163;MQB=0.0025222;MQSB=0.968767;RPB=0.963611;SGB=21.56;VDB=0.863808;EFF=INTRON(MODIFIER||||1475|LOC_Os02g13750|protein_coding|CODING|LOC_Os02g13750.1|1|1) FN723-S.SNP.2:7411015 chr02:007411015 0 W/7411015-7411015 FN723-S Single Base Substitution G-A INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN850-S.SNP.2:7420143 chr02:007420143 0 W/7420143-7420143 FN850-S Single Base Substitution T-A INTERGENIC HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN434-S.SNP.2:7439608 chr02:007439608 0 W/7439608-7439608 FN434-S Single Base Substitution G-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN-104.SNP.2:7440564 chr02:007440564 0 W/7440564-7440564 FN-104 Single Base Substitution C-T UTR_5_PRIME HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3992-S.SNP.2:7443411 chr02:007443411 0 W/7443411-7443411 FN3992-S SNP C -> A AC=1;AN=168;BQB=0.287305;DP=2753;DP4=1079,1447,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.03322e-05;MQSB=0.999383;RPB=0.893425;SGB=41.6096;VDB=0.381728;EFF=UTR_3_PRIME(MODIFIER||1168||108|LOC_Os02g13785|protein_coding|CODING|LOC_Os02g13785.1|1|1) FN-59.SNP.2:7445903 chr02:007445903 0 W/7445903-7445903 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3570-S.SNP.2:7455386 chr02:007455386 0 W/7455386-7455386 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.946319;DP=3066;DP4=1466,1469,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000326158;MQB=8.20696e-11;MQSB=0.994292;RPB=0.997016;SGB=57.4238;VDB=0.844779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.2:7459818 chr02:007459818 0 W/7459818-7459818 FN2731-S SNP C -> A AC=2;AN=200;BQB=0.944822;DP=4968;DP4=2343,2313,25,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.29161e-27;MQSB=0.992092;RPB=0.98296;SGB=173.661;VDB=0.747533;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.2:7466577 chr02:007466577 0 W/7466577-7466577 FN897-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN1641-S.SNP.2:7471059 chr02:007471059 0 W/7471059-7471059 FN1641-S Single Base Substitution T-C INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN523-S.SNP.2:7481484 chr02:007481484 0 W/7481484-7481484 FN523-S Single Base Substitution A-C INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.2:7481484 chr02:007481484 0 W/7481484-7481484 FN532-S Single Base Substitution A-C INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2492.SNP.2:7483263 chr02:007483263 0 W/7483263-7483263 FN2492 SNP T -> A AC=2;AN=200;BQB=0.931784;DP=4156;DP4=1247,1491,18,10;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=5.19875e-09;MQSB=1.28092e-09;RPB=0.911827;SGB=-7.05853;VDB=0.0162466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.2:7488957 chr02:007488957 0 W/7488957-7488957 FN2285 SNP G -> C AC=1;AN=192;BQB=0.329206;DP=4870;DP4=2306,2242,9,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205339;MQB=5.58697e-12;MQSB=0.958805;RPB=0.630032;SGB=19.8696;VDB=0.852642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.2:7502431 chr02:007502431 0 W/7502431-7502431 FN2725-S SNP G -> C AC=2;AN=200;BQB=0.985598;DP=4719;DP4=2273,2214,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.46276e-19;MQSB=0.727784;RPB=0.971032;SGB=155.578;VDB=0.899278;EFF=INTRON(MODIFIER||||719|LOC_Os02g13850|protein_coding|CODING|LOC_Os02g13850.1|1|1) FN1704-S.SNP.2:7504218 chr02:007504218 0 W/7504218-7504218 FN1704-S SNP A -> G AC=1;AN=188;BQB=0.268402;DP=4125;DP4=2098,1997,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.9022e-07;MQSB=0.98521;RPB=0.947768;SGB=-57.5324;VDB=0.819082;EFF=INTRON(MODIFIER||||719|LOC_Os02g13850|protein_coding|CODING|LOC_Os02g13850.1|2|1) FN3427-S.SNP.2:7515422 chr02:007515422 0 W/7515422-7515422 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.970982;DP=3561;DP4=1222,2213,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44854e-15;MQSB=0.653552;RPB=0.958272;SGB=116.569;VDB=0.0166859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.2:7516399 chr02:007516399 0 W/7516399-7516399 FN2456 SNP A -> G AC=1;AN=200;BQB=0.773792;DP=4766;DP4=2172,2362,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.00897e-06;MQSB=0.986984;RPB=0.978159;SGB=13.8539;VDB=0.821459;EFF=UTR_3_PRIME(MODIFIER||243||284|LOC_Os02g13870|protein_coding|CODING|LOC_Os02g13870.1|4|1) FN1406-S.SNP.2:7524794 chr02:007524794 0 W/7524794-7524794 FN1406-S Single Base Substitution A-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1053-S.SNP.2:7526628 chr02:007526628 0 W/7526628-7526628 FN1053-S Single Base Substitution G-T INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN3844-S.SNP.2:7527627 chr02:007527627 0 W/7527627-7527627 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.629852;DP=2038;DP4=1187,670,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65661e-05;MQSB=0.3885;RPB=0.927193;SGB=8.33661;VDB=0.930666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.2:7536336 chr02:007536336 0 W/7536336-7536336 FN2296 SNP G -> T AC=1;AN=192;BQB=0.756585;DP=4836;DP4=2154,2444,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.78236e-16;MQSB=0.962351;RPB=0.481929;SGB=108.547;VDB=0.918387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.2:7536338 chr02:007536338 0 W/7536338-7536338 FN2296 SNP T -> A AC=1;AN=192;BQB=0.99968;DP=4860;DP4=2171,2468,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.5033e-17;MQSB=0.987768;RPB=0.259249;SGB=-7.43215;VDB=0.873862;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.2:7537258 chr02:007537258 0 W/7537258-7537258 FN829-S Single Base Substitution A-C INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN597-S.SNP.2:7539648 chr02:007539648 0 W/7539648-7539648 FN597-S Single Base Substitution A-T INTERGENIC HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2742-S.SNP.2:7540116 chr02:007540116 0 W/7540116-7540116 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.87136;DP=4953;DP4=2547,2157,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55211e-09;MQSB=0.991345;RPB=0.210737;SGB=54.6902;VDB=0.373001;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.2:7559161 chr02:007559161 0 W/7559161-7559161 FN4174-S SNP T -> A AC=2;AN=170;BQB=0.999748;DP=2425;DP4=1225,1126,16,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000412371;MQB=8.26062e-13;MQSB=0.99987;RPB=0.323004;SGB=101.184;VDB=0.130844;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G1313|1440|LOC_Os02g13910|protein_coding|CODING|LOC_Os02g13910.1|11|1) FN3992-S.SNP.2:7561396 chr02:007561396 0 W/7561396-7561396 FN3992-S SNP A -> G AC=1;AN=168;BQB=0.913479;DP=2910;DP4=1495,1270,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00515464;MQB=0.00979187;MQSB=0.00113128;RPB=0.992376;SGB=56.6036;VDB=0.917907;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F672|1440|LOC_Os02g13910|protein_coding|CODING|LOC_Os02g13910.1|8|1) FN2584-S.SNP.2:7562007 chr02:007562007 0 W/7562007-7562007 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.666007;DP=5170;DP4=2562,2304,21,21;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0589942;MQB=0.225427;MQSB=0;RPB=0.906387;SGB=94.2223;VDB=0.670088;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A488T|1440|LOC_Os02g13910|protein_coding|CODING|LOC_Os02g13910.1|7|1) FN1737-S.SNP.2:7566517 chr02:007566517 0 W/7566517-7566517 FN1737-S SNP C -> A AC=1;AN=188;BQB=0.072446;DP=4261;DP4=2051,2164,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.60107e-08;MQSB=0.997784;RPB=0.734314;SGB=-98.724;VDB=0.967326;EFF=INTRON(MODIFIER||||1440|LOC_Os02g13910|protein_coding|CODING|LOC_Os02g13910.1|3|1) FN2621-S.SNP.2:7571211 chr02:007571211 0 W/7571211-7571211 FN2621-S SNP G -> C AC=1;AN=200;BQB=0.947387;DP=4701;DP4=2282,2165,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87492e-17;MQSB=0.981265;RPB=0.872526;SGB=55.5366;VDB=0.887522;EFF=INTERGENIC(MODIFIER||||||||||1) FN540-S.SNP.2:7573579 chr02:007573579 0 W/7573579-7573579 FN540-S Single Base Substitution A-T INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN1472-S.SNP.2:7574285 chr02:007574285 0 W/7574285-7574285 FN1472-S Single Base Substitution T-G INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1406-S.SNP.2:7575693 chr02:007575693 0 W/7575693-7575693 FN1406-S Single Base Substitution T-G INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN622-S.SNP.2:7576309 chr02:007576309 0 W/7576309-7576309 FN622-S Single Base Substitution C-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2673-S.SNP.2:7579652 chr02:007579652 0 W/7579652-7579652 FN2673-S SNP T -> A AC=1;AN=200;BQB=0.549615;DP=5091;DP4=2621,2232,13,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27624e-09;MQSB=0.708591;RPB=0.864016;SGB=40.2696;VDB=0.301714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.2:7579923 chr02:007579923 0 W/7579923-7579923 FN3468-S SNP C -> G AC=2;AN=184;BQB=0.986205;DP=2859;DP4=1333,1379,22,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.31428e-20;MQSB=0.999804;RPB=0.954451;SGB=134.358;VDB=0.775678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.2:7580285 chr02:007580285 0 W/7580285-7580285 FN2686-S SNP G -> T AC=1;AN=200;BQB=0.992622;DP=4936;DP4=2639,2000,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.92106e-07;MQSB=0.982077;RPB=0.481497;SGB=25.849;VDB=0.619026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.2:7580286 chr02:007580286 0 W/7580286-7580286 FN2686-S SNP A -> T AC=1;AN=200;BQB=0.511262;DP=4938;DP4=2713,1991,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79168e-06;MQSB=0.984808;RPB=0.371507;SGB=13.8539;VDB=0.486768;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.2:7581440 chr02:007581440 0 W/7581440-7581440 FN821-S Single Base Substitution C-A INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN732-S.SNP.2:7582914 chr02:007582914 0 W/7582914-7582914 FN732-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g13930 expressed protein SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN732-S.SNP.2:7582917 chr02:007582917 0 W/7582917-7582917 FN732-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g13930 expressed protein SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2779-S.SNP.2:7582994 chr02:007582994 0 W/7582994-7582994 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.998407;DP=3982;DP4=2017,1722,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.61865e-17;MQSB=0.989201;RPB=0.786175;SGB=94.0758;VDB=0.316483;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A737|949|LOC_Os02g13930|protein_coding|CODING|LOC_Os02g13930.1|6|1) FN4241-S.SNP.2:7591624 chr02:007591624 0 W/7591624-7591624 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.804064;DP=2595;DP4=956,1535,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.02967e-10;MQSB=0.971459;RPB=0.711552;SGB=29.6545;VDB=0.676572;EFF=INTERGENIC(MODIFIER||||||||||1) FN900-S.SNP.2:7593078 chr02:007593078 0 W/7593078-7593078 FN900-S Single Base Substitution G-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN2320.SNP.2:7598162 chr02:007598162 0 W/7598162-7598162 FN2320 SNP T -> C AC=1;AN=192;BQB=0.685454;DP=5177;DP4=2449,2433,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.28101e-14;MQSB=0.769656;RPB=0.951431;SGB=19.8696;VDB=0.3256;EFF=INTRON(MODIFIER||||493|LOC_Os02g13950|protein_coding|CODING|LOC_Os02g13950.1|5|1) FN3536-S.SNP.2:7603160 chr02:007603160 0 W/7603160-7603160 FN3536-S SNP C -> T AC=2;AN=188;BQB=0.988554;DP=2913;DP4=1258,1493,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.61753e-09;MQSB=0.978654;RPB=0.851076;SGB=53.7007;VDB=0.0367598;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.2:7608222 chr02:007608222 0 W/7608222-7608222 FN-278 Single Base Substitution G-A INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN506-S.SNP.2:7618355 chr02:007618355 0 W/7618355-7618355 FN506-S Single Base Substitution T-C INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN4090-S.SNP.2:7625104 chr02:007625104 0 W/7625104-7625104 FN4090-S SNP G -> A AC=1;AN=182;BQB=0.633703;DP=2862;DP4=1576,1116,12,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.04257e-08;MQSB=0.2324;RPB=0.97985;SGB=33.1875;VDB=0.856719;EFF=INTRON(MODIFIER||||587|LOC_Os02g13970|protein_coding|CODING|LOC_Os02g13970.1|9|1),INTRON(MODIFIER||||587|LOC_Os02g13970|protein_coding|CODING|LOC_Os02g13970.2|9|1) FN2462.SNP.2:7637410 chr02:007637410 0 W/7637410-7637410 FN2462 SNP G -> A AC=1;AN=200;BQB=0.873288;DP=3784;DP4=1793,1821,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.88053e-09;MQSB=0.915399;RPB=0.992054;SGB=4.67442;VDB=0.873702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.2:7648414 chr02:007648414 0 W/7648414-7648414 FN3902-S SNP A -> C AC=1;AN=158;BQB=0.711115;DP=2357;DP4=1005,1279,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.54339e-06;MQSB=0.993447;RPB=0.182806;SGB=34.0735;VDB=0.058045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.2:7650374 chr02:007650374 0 W/7650374-7650374 FN2383 SNP A -> T AC=1;AN=192;BQB=0.682026;DP=4693;DP4=2298,2185,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.16196e-13;MQSB=0.963422;RPB=0.999828;SGB=41.7357;VDB=0.14947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.2:7658757 chr02:007658757 0 W/7658757-7658757 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.394383;DP=5023;DP4=2382,2217,18,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.12175e-24;MQSB=0.994007;RPB=0.974111;SGB=50.7274;VDB=0.686985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A60T|77|LOC_Os02g14030|protein_coding|CODING|LOC_Os02g14030.1|3|1) FN821-S.SNP.2:7659468 chr02:007659468 0 W/7659468-7659468 FN821-S Single Base Substitution C-A INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN2374.SNP.2:7663803 chr02:007663803 0 W/7663803-7663803 FN2374 SNP G -> A AC=1;AN=192;BQB=0.624009;DP=4755;DP4=2495,1947,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.97626e-11;MQSB=0.955557;RPB=0.977216;SGB=18.3052;VDB=0.293708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.2:7665574 chr02:007665574 0 W/7665574-7665574 FN2682-S SNP A -> T AC=1;AN=200;BQB=0.146259;DP=5084;DP4=2328,2447,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.53362e-05;MQSB=0.0653989;RPB=0.322972;SGB=-1.74624;VDB=0.346801;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.2:7669450 chr02:007669450 0 W/7669450-7669450 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3471-S.SNP.2:7674355 chr02:007674355 0 W/7674355-7674355 FN3471-S SNP C -> T AC=1;AN=184;BQB=0.899371;DP=2775;DP4=1362,1336,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.34955;MQB=0.215513;MQSB=0;RPB=0.871697;SGB=63.9222;VDB=0.615241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.2:7675342 chr02:007675342 0 W/7675342-7675342 FN2194-S SNP C -> G AC=1;AN=190;BQB=0.996033;DP=5142;DP4=2453,2330,21,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000194477;MQB=8.22612e-21;MQSB=0.997662;RPB=0.388859;SGB=82.3989;VDB=0.366179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.2:7675343 chr02:007675343 0 W/7675343-7675343 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.528055;DP=5145;DP4=2439,2327,19,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000194363;MQB=4.96825e-22;MQSB=0.958064;RPB=0.40329;SGB=158.388;VDB=0.430064;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.2:7688418 chr02:007688418 0 W/7688418-7688418 FN-390 Single Base Substitution A-T INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN632-S.SNP.2:7690161 chr02:007690161 0 W/7690161-7690161 FN632-S Single Base Substitution C-A INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1460-S.SNP.2:7696012 chr02:007696012 0 W/7696012-7696012 FN1460-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g14100 retrotransposon protein, putative, unclassified, expressed SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1460-S.SNP.2:7696013 chr02:007696013 0 W/7696013-7696013 FN1460-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g14100 retrotransposon protein, putative, unclassified, expressed SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN855-S.SNP.2:7700884 chr02:007700884 0 W/7700884-7700884 FN855-S Single Base Substitution G-A INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN-187.SNP.2:7707370 chr02:007707370 0 W/7707370-7707370 FN-187 Single Base Substitution T-G INTRON HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3753-S.SNP.2:7712195 chr02:007712195 0 W/7712195-7712195 FN3753-S SNP G -> A AC=1;AN=190;BQB=0.531999;DP=2801;DP4=1336,1345,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.35629e-07;MQSB=0.992589;RPB=0.868025;SGB=2.55724;VDB=0.859771;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y386|620|LOC_Os02g14120|protein_coding|CODING|LOC_Os02g14120.1|10|1) FN4083-S.SNP.2:7713611 chr02:007713611 0 W/7713611-7713611 FN4083-S SNP A -> G AC=2;AN=182;BQB=0.383139;DP=2725;DP4=1233,1375,28,34;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.44235e-36;MQSB=0.972936;RPB=0.895546;SGB=233.165;VDB=0.500081;EFF=INTRON(MODIFIER||||620|LOC_Os02g14120|protein_coding|CODING|LOC_Os02g14120.1|4|1) FN3371-S.SNP.2:7717771 chr02:007717771 0 W/7717771-7717771 FN3371-S SNP C -> T AC=1;AN=184;BQB=0.963169;DP=2747;DP4=1118,1560,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23983e-07;MQSB=0.997225;RPB=0.995557;SGB=44.2207;VDB=0.54266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.2:7717773 chr02:007717773 0 W/7717773-7717773 FN3371-S SNP G -> A AC=1;AN=184;BQB=0.976225;DP=2751;DP4=1124,1567,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.94359e-07;MQSB=0.991825;RPB=0.997903;SGB=39.699;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.2:7718733 chr02:007718733 0 W/7718733-7718733 FN561-S Single Base Substitution A-C INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN-181.SNP.2:7728039 chr02:007728039 0 W/7728039-7728039 FN-181 Single Base Substitution T-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3064-S.SNP.2:7731794 chr02:007731794 0 W/7731794-7731794 FN3064-S SNP C -> T AC=2;AN=184;BQB=0.999114;DP=2709;DP4=1399,1222,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.93043e-12;MQSB=0.925546;RPB=0.448357;SGB=35.884;VDB=0.0458682;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.2:7731796 chr02:007731796 0 W/7731796-7731796 FN3064-S SNP A -> G AC=2;AN=184;BQB=0.895321;DP=2727;DP4=1423,1224,11,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.38282e-12;MQSB=0.910056;RPB=0.533889;SGB=75.8731;VDB=0.0745932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.2:7735754 chr02:007735754 0 W/7735754-7735754 FN1094-S Single Base Substitution T-C INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN4021-S.SNP.2:7736894 chr02:007736894 0 W/7736894-7736894 FN4021-S SNP C -> A AC=2;AN=168;BQB=0.659719;DP=2498;DP4=1293,1096,15,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.92255e-15;MQSB=0.222868;RPB=0.958546;SGB=65.9394;VDB=0.756791;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.2:7739451 chr02:007739451 0 W/7739451-7739451 FN1473-S Single Base Substitution C-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN777-S.SNP.2:7740074 chr02:007740074 0 W/7740074-7740074 FN777-S Single Base Substitution T-A INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN629-S.SNP.2:7741480 chr02:007741480 0 W/7741480-7741480 FN629-S Single Base Substitution A-G INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2587-S.SNP.2:7742571 chr02:007742571 0 W/7742571-7742571 FN2587-S SNP A -> C AC=1;AN=198;BQB=0.951327;DP=4267;DP4=2033,2006,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.2155e-16;MQSB=0.775441;RPB=0.592504;SGB=25.3006;VDB=0.411752;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.2:7752463 chr02:007752463 0 W/7752463-7752463 FN1673-S SNP C -> T AC=2;AN=188;BQB=0.334958;DP=2278;DP4=928,1303,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.4776e-12;MQSB=0.928479;RPB=0.520979;SGB=54.0524;VDB=0.882277;EFF=INTRON(MODIFIER||||321|LOC_Os02g14160|protein_coding|CODING|LOC_Os02g14160.1|2|1) FN2681-S.SNP.2:7753634 chr02:007753634 0 W/7753634-7753634 FN2681-S SNP T -> A AC=1;AN=200;BQB=0.99802;DP=4560;DP4=2255,1898,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87537e-16;MQSB=0.583461;RPB=0.999962;SGB=87.1368;VDB=0.749646;EFF=UTR_3_PRIME(MODIFIER||434||321|LOC_Os02g14160|protein_coding|CODING|LOC_Os02g14160.1|3|1) FN2572-S.SNP.2:7756276 chr02:007756276 0 W/7756276-7756276 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.906645;DP=4545;DP4=2258,2065,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.27177e-14;MQSB=0.91075;RPB=0.547782;SGB=76.1002;VDB=0.144851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.2:7758807 chr02:007758807 0 W/7758807-7758807 FN2705-S SNP C -> A AC=1;AN=200;BQB=0.762096;DP=5040;DP4=2320,2486,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.68712e-10;MQSB=1;RPB=0.843812;SGB=51.0851;VDB=0.842833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.2:7786679 chr02:007786679 0 W/7786679-7786679 FN1438-S Single Base Substitution C-T INTRON HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2537-S.SNP.2:7786712 chr02:007786712 0 W/7786712-7786712 FN2537-S SNP G -> A AC=2;AN=198;BQB=0.00501435;DP=3613;DP4=1871,1571,21,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.12258e-14;MQSB=0.385473;RPB=0.997572;SGB=23.7055;VDB=0.804998;EFF=INTRON(MODIFIER||||648|LOC_Os02g14210|protein_coding|CODING|LOC_Os02g14210.1|5|1) FN2360.SNP.2:7788977 chr02:007788977 0 W/7788977-7788977 FN2360 SNP G -> A AC=1;AN=192;BQB=0.396422;DP=4489;DP4=2187,2089,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.79906e-06;MQSB=0.915571;RPB=0.979522;SGB=50.4731;VDB=0.280002;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.2:7794668 chr02:007794668 0 W/7794668-7794668 W470-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. W470-2-1.SNP.2:7794717 chr02:007794717 0 W/7794717-7794717 W470-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2437.SNP.2:7797949 chr02:007797949 0 W/7797949-7797949 FN2437 SNP T -> C AC=1;AN=200;BQB=0.168822;DP=3486;DP4=1238,1428,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34448e-09;MQSB=0.148124;RPB=0.985816;SGB=-228.865;VDB=0.534561;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G80|111|LOC_Os02g14230|protein_coding|CODING|LOC_Os02g14230.1|2|1) FN3591-S.SNP.2:7804110 chr02:007804110 0 W/7804110-7804110 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.969334;DP=2989;DP4=1539,1379,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.95948e-11;MQSB=0.9616;RPB=0.380887;SGB=71.6954;VDB=0.341531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.2:7808244 chr02:007808244 0 W/7808244-7808244 FN3637-S SNP A -> T AC=2;AN=190;BQB=0.959552;DP=3198;DP4=1469,1555,8,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48816e-13;MQSB=0.965278;RPB=0.982875;SGB=85.8548;VDB=0.702258;EFF=INTRON(MODIFIER||||61|LOC_Os02g14240|protein_coding|CODING|LOC_Os02g14240.1|1|1) FN-289.SNP.2:7808337 chr02:007808337 0 W/7808337-7808337 FN-289 Single Base Substitution G-A INTRON HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3760-S.SNP.2:7810234 chr02:007810234 0 W/7810234-7810234 FN3760-S SNP G -> A AC=1;AN=190;BQB=0.962912;DP=2732;DP4=1293,1348,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000366032;MQB=0.000310603;MQSB=0.984616;RPB=0.234358;SGB=35.4339;VDB=0.160383;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.2:7817220 chr02:007817220 0 W/7817220-7817220 FN978-S Single Base Substitution A-T INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-156.SNP.2:7820713 chr02:007820713 0 W/7820713-7820713 FN-156 Single Base Substitution G-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN767-S.SNP.2:7825530 chr02:007825530 0 W/7825530-7825530 FN767-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g14260 retrotransposon protein, putative, unclassified, expressed SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN1284-S.SNP.2:7829438 chr02:007829438 0 W/7829438-7829438 FN1284-S Single Base Substitution C-G INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3514-S.SNP.2:7830411 chr02:007830411 0 W/7830411-7830411 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.792843;DP=3157;DP4=1696,1373,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000105044;MQSB=0.935027;RPB=0.43218;SGB=28.8977;VDB=0.682947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.2:7831349 chr02:007831349 0 W/7831349-7831349 FN2782-S SNP C -> G AC=1;AN=198;BQB=0.820636;DP=4275;DP4=1933,2086,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.76853e-13;MQSB=0.505684;RPB=0.319252;SGB=123.071;VDB=0.862622;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.2:7832039 chr02:007832039 0 W/7832039-7832039 FN702-S Single Base Substitution A-T INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3783-S.SNP.2:7833006 chr02:007833006 0 W/7833006-7833006 FN3783-S SNP A -> T AC=1;AN=190;BQB=0.997435;DP=3310;DP4=1861,1345,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0199396;MQB=0.000265428;MQSB=0.0149663;RPB=0.381003;SGB=38.983;VDB=0.151322;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.2:7835157 chr02:007835157 0 W/7835157-7835157 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.302043;DP=3082;DP4=1507,1489,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=7.6778e-05;MQSB=0.0106644;RPB=0.997831;SGB=53.1331;VDB=0.422093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.2:7836522 chr02:007836522 0 W/7836522-7836522 FN2437 SNP A -> T AC=1;AN=200;BQB=0.915243;DP=4828;DP4=2182,2428,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207125;MQB=3.20173e-11;MQSB=0.890975;RPB=0.988291;SGB=-11.8999;VDB=0.454176;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.2:7837551 chr02:007837551 0 W/7837551-7837551 FN4164-S SNP G -> A AC=2;AN=170;BQB=0.817583;DP=1536;DP4=1271,163,22,1;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.51296e-05;MQSB=1.91482e-06;RPB=0.104289;SGB=96.7413;VDB=0.654208;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.2:7843195 chr02:007843195 0 W/7843195-7843195 FN1405-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g14280 transposon protein, putative, unclassified, expressed SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1405-S.SNP.2:7843196 chr02:007843196 0 W/7843196-7843196 FN1405-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g14280 transposon protein, putative, unclassified, expressed SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN4230-S.SNP.2:7850212 chr02:007850212 0 W/7850212-7850212 FN4230-S SNP C -> T AC=2;AN=170;BQB=0.663751;DP=2450;DP4=1118,1241,9,12;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.00122449;MQB=2.40258e-09;MQSB=0.00743128;RPB=0.855973;SGB=36.9825;VDB=0.172437;EFF=INTRON(MODIFIER||||208|LOC_Os02g14290|protein_coding|CODING|LOC_Os02g14290.1|1|1),INTRON(MODIFIER||||199|LOC_Os02g14290|protein_coding|CODING|LOC_Os02g14290.2|1|1) FN4230-S.SNP.2:7850213 chr02:007850213 0 W/7850213-7850213 FN4230-S SNP C -> T AC=2;AN=170;BQB=0.982605;DP=2461;DP4=1118,1249,7,13;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.00121902;MQB=1.93725e-10;MQSB=0.0191133;RPB=0.936367;SGB=83.4133;VDB=0.0180659;EFF=INTRON(MODIFIER||||208|LOC_Os02g14290|protein_coding|CODING|LOC_Os02g14290.1|1|1),INTRON(MODIFIER||||199|LOC_Os02g14290|protein_coding|CODING|LOC_Os02g14290.2|1|1) W464-2-1.SNP.2:7853789 chr02:007853789 0 W/7853789-7853789 W464-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN1329-S.SNP.2:7855847 chr02:007855847 0 W/7855847-7855847 FN1329-S Single Base Substitution G-A INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1717-S.SNP.2:7859833 chr02:007859833 0 W/7859833-7859833 FN1717-S SNP G -> C AC=1;AN=188;BQB=0.365878;DP=2855;DP4=1324,1489,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.34504e-07;MQSB=0.93248;RPB=0.318311;SGB=8.62479;VDB=0.57242;EFF=INTRON(MODIFIER||||424|LOC_Os02g14320|protein_coding|CODING|LOC_Os02g14320.1|2|1) FN3491-S.SNP.2:7878510 chr02:007878510 0 W/7878510-7878510 FN3491-S SNP G -> A AC=2;AN=188;BQB=0.919008;DP=3202;DP4=1597,1551,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.89424e-14;MQSB=0.998307;RPB=0.637523;SGB=103.498;VDB=0.142184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A217T|798|LOC_Os02g14360|protein_coding|CODING|LOC_Os02g14360.1|4|1) FN1163-S.SNP.2:7882285 chr02:007882285 0 W/7882285-7882285 FN1163-S Single Base Substitution T-C INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2433.SNP.2:7886745 chr02:007886745 0 W/7886745-7886745 FN2433 SNP C -> T AC=1;AN=200;BQB=0.169338;DP=4559;DP4=2080,2175,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.0618e-12;MQSB=0.0582824;RPB=0.787192;SGB=-69.4692;VDB=0.672367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1100T|1504|LOC_Os02g14370|protein_coding|CODING|LOC_Os02g14370.1|7|1) FN-121.SNP.2:7888475 chr02:007888475 0 W/7888475-7888475 FN-121 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g14370 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3639-S.SNP.2:7888777 chr02:007888777 0 W/7888777-7888777 FN3639-S SNP A -> G AC=2;AN=190;BQB=0.988776;DP=2824;DP4=1394,1269,14,15;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.00849858;MQB=0.186292;MQSB=0.0364399;RPB=0.198884;SGB=92.9626;VDB=0.262993;EFF=INTRON(MODIFIER||||1504|LOC_Os02g14370|protein_coding|CODING|LOC_Os02g14370.1|4|1) FN3807-S.SNP.2:7890470 chr02:007890470 0 W/7890470-7890470 FN3807-S SNP T -> C AC=1;AN=190;BQB=0.997991;DP=3342;DP4=1789,1430,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.68491e-07;MQSB=0.044301;RPB=0.309828;SGB=21.1058;VDB=0.122426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I51M|1504|LOC_Os02g14370|protein_coding|CODING|LOC_Os02g14370.1|2|1) FN2497.SNP.2:7893401 chr02:007893401 0 W/7893401-7893401 FN2497 SNP T -> C AC=1;AN=200;BQB=0.891253;DP=5043;DP4=2654,2091,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.49858e-08;MQSB=0.909778;RPB=0.424217;SGB=-0.141083;VDB=0.718157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.2:7894041 chr02:007894041 0 W/7894041-7894041 FN3421-S SNP T -> G AC=2;AN=182;BQB=0.98733;DP=2470;DP4=1005,1366,10,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.1802e-14;MQSB=0.992783;RPB=0.801276;SGB=107.526;VDB=0.972432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.2:7900884 chr02:007900884 0 W/7900884-7900884 FN1695-S SNP C -> T AC=2;AN=188;BQB=0.167917;DP=2777;DP4=1404,1334,18,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.31438e-12;MQSB=0.935187;RPB=0.817744;SGB=-10.6534;VDB=0.476318;EFF=INTRON(MODIFIER||||727|LOC_Os02g14390|protein_coding|CODING|LOC_Os02g14390.1|1|1) FN1193-S.SNP.2:7903020 chr02:007903020 0 W/7903020-7903020 FN1193-S Single Base Substitution C-T INTRON HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. W426-1-1.SNP.2:7908504 chr02:007908504 0 W/7908504-7908504 W426-1-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g14400 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. W426-1-1.SNP.2:7908505 chr02:007908505 0 W/7908505-7908505 W426-1-1 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os02g14400 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1697-S.SNP.2:7911521 chr02:007911521 0 W/7911521-7911521 FN1697-S SNP G -> T AC=1;AN=188;BQB=0.910725;DP=3587;DP4=1942,1614,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67457e-10;MQSB=0.998275;RPB=0.240555;SGB=67.1521;VDB=0.0549041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L1148M|1551|LOC_Os02g14410|protein_coding|CODING|LOC_Os02g14410.1|7|1) FN4022-S.SNP.2:7913015 chr02:007913015 0 W/7913015-7913015 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.653705;DP=2650;DP4=1295,1239,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.43811e-08;MQSB=0.991033;RPB=0.838669;SGB=45.0404;VDB=0.100725;EFF=INTRON(MODIFIER||||1551|LOC_Os02g14410|protein_coding|CODING|LOC_Os02g14410.1|5|1) FN2785-S.SNP.2:7913172 chr02:007913172 0 W/7913172-7913172 FN2785-S SNP A -> G AC=1;AN=198;BQB=0.963092;DP=4328;DP4=2143,1916,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.54998e-11;MQSB=0.0277322;RPB=0.80816;SGB=22.1104;VDB=0.254581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V898A|1551|LOC_Os02g14410|protein_coding|CODING|LOC_Os02g14410.1|5|1) FN3801-S.SNP.2:7919790 chr02:007919790 0 W/7919790-7919790 FN3801-S SNP T -> A AC=1;AN=190;BQB=0.783157;DP=2442;DP4=1307,1015,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.003276;MQB=1.20366e-05;MQSB=0.0804842;RPB=0.464109;SGB=21.8853;VDB=0.550378;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.2:7921812 chr02:007921812 0 W/7921812-7921812 FN4164-S SNP G -> A AC=2;AN=170;BQB=0.982208;DP=2183;DP4=991,1114,9,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.01344e-11;MQSB=0.693472;RPB=0.920861;SGB=83.4133;VDB=0.850636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.2:7923789 chr02:007923789 0 W/7923789-7923789 FN2190-S SNP A -> G AC=1;AN=190;BQB=0.990825;DP=4504;DP4=2323,1736,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=6.47156e-09;MQSB=0.766111;RPB=0.99992;SGB=78.7471;VDB=0.733053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.2:7930367 chr02:007930367 0 W/7930367-7930367 FN1517-S Single Base Substitution T-C INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN-279.SNP.2:7933905 chr02:007933905 0 W/7933905-7933905 FN-279 Single Base Substitution C-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4164-S.SNP.2:7945198 chr02:007945198 0 W/7945198-7945198 FN4164-S SNP A -> T AC=2;AN=170;BQB=0.575336;DP=2435;DP4=1320,1024,10,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.03394e-09;MQSB=0.99494;RPB=0.916362;SGB=92.2986;VDB=0.864669;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.2:7949195 chr02:007949195 0 W/7949195-7949195 FN670-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g14440 peroxidase precursor, putative, expressed SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3446-S.SNP.2:7949350 chr02:007949350 0 W/7949350-7949350 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.780382;DP=3776;DP4=2011,1574,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.34145e-10;MQSB=0.996067;RPB=0.892116;SGB=28.3187;VDB=0.593184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W142L|321|LOC_Os02g14440|protein_coding|CODING|LOC_Os02g14440.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L83|310|LOC_Os02g14440|protein_coding|CODING|LOC_Os02g14440.2|2|1) FN_826-4-1.SNP.2:7950271 chr02:007950271 0 W/7950271-7950271 FN_826-4-1 Single Base Substitution A-G Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN2596-S.SNP.2:7963719 chr02:007963719 0 W/7963719-7963719 FN2596-S SNP T -> A AC=1;AN=198;BQB=0.99945;DP=4290;DP4=1922,2144,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17101e-07;MQSB=0.938755;RPB=0.862995;SGB=21.559;VDB=0.533628;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.2:7974884 chr02:007974884 0 W/7974884-7974884 FN1375-S Single Base Substitution T-C INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2673-S.SNP.2:7980098 chr02:007980098 0 W/7980098-7980098 FN2673-S SNP G -> A AC=2;AN=200;BQB=0.827425;DP=4730;DP4=2261,2199,29,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.09902e-32;MQSB=0.924974;RPB=0.432052;SGB=266.102;VDB=0.895224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.2:7991730 chr02:007991730 0 W/7991730-7991730 FN2582-S SNP G -> T AC=1;AN=198;BQB=0.786084;DP=4079;DP4=1857,1967,1,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.20714e-05;MQSB=0.880292;RPB=0.889112;SGB=26.5745;VDB=0.889744;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.2:8001789 chr02:008001789 0 W/8001789-8001789 FN-207 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1326-S.SNP.2:8016272 chr02:008016272 0 W/8016272-8016272 FN1326-S Single Base Substitution T-C INTRON HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3830-S.SNP.2:8017356 chr02:008017356 0 W/8017356-8017356 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.999737;DP=2508;DP4=1237,1190,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31785e-09;MQSB=0.936251;RPB=0.597959;SGB=67.3108;VDB=0.123095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.2:8017696 chr02:008017696 0 W/8017696-8017696 FN3626-S SNP G -> T AC=1;AN=190;BQB=0.96352;DP=2737;DP4=1301,1348,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.20806e-06;MQSB=0.177445;RPB=0.937534;SGB=-2.10437;VDB=0.427987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.2:8026734 chr02:008026734 0 W/8026734-8026734 FN2754-S SNP T -> A AC=1;AN=200;BQB=0.976522;DP=4738;DP4=2165,2429,11,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00168848;MQB=0.000300717;MQSB=0.198111;RPB=0.997918;SGB=32.0901;VDB=0.81215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.2:8033569 chr02:008033569 0 W/8033569-8033569 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.987139;DP=2537;DP4=1203,1258,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.99614e-09;MQSB=0.0535562;RPB=0.466089;SGB=58.2031;VDB=0.576633;EFF=INTERGENIC(MODIFIER||||||||||1) FN906-S.SNP.2:8039726 chr02:008039726 0 W/8039726-8039726 FN906-S Single Base Substitution G-A INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN3750-S.SNP.2:8040551 chr02:008040551 0 W/8040551-8040551 FN3750-S SNP A -> T AC=1;AN=190;BQB=0.957869;DP=2056;DP4=929,990,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.70155e-11;MQSB=0.819818;RPB=0.438928;SGB=76.4186;VDB=0.0857738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.2:8042036 chr02:008042036 0 W/8042036-8042036 FN3285-S SNP A -> G AC=1;AN=184;BQB=0.989693;DP=3668;DP4=1672,1841,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.68524e-08;MQSB=3.72128e-05;RPB=0.958473;SGB=75.8731;VDB=0.898384;EFF=INTRON(MODIFIER||||1578|LOC_Os02g14580|protein_coding|CODING|LOC_Os02g14580.1|1|1) FN-231.SNP.2:8044308 chr02:008044308 0 W/8044308-8044308 FN-231 Single Base Substitution T-C INTRON HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN888-S.SNP.2:8047619 chr02:008047619 0 W/8047619-8047619 FN888-S Single Base Substitution C-T INTRON HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN-278.SNP.2:8047764 chr02:008047764 0 W/8047764-8047764 FN-278 Single Base Substitution C-T INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2328.SNP.2:8056332 chr02:008056332 0 W/8056332-8056332 FN2328 SNP C -> A AC=1;AN=192;BQB=0.876838;DP=5247;DP4=2499,2459,19,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.29215e-19;MQSB=0.989506;RPB=0.842778;SGB=-43.6052;VDB=0.525029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.2:8058530 chr02:008058530 0 W/8058530-8058530 FN1073-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN-76.SNP.2:8059331 chr02:008059331 0 W/8059331-8059331 FN-76 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g14600 glutelin, putative, expressed SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-76.SNP.2:8059332 chr02:008059332 0 W/8059332-8059332 FN-76 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN3485-S.SNP.2:8060733 chr02:008060733 0 W/8060733-8060733 FN3485-S SNP A -> T AC=1;AN=184;BQB=0.272458;DP=2885;DP4=1222,1528,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.64269e-07;MQSB=0.721954;RPB=0.807937;SGB=35.884;VDB=0.6639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.2:8067266 chr02:008067266 0 W/8067266-8067266 FN2493 SNP T -> C AC=1;AN=200;BQB=0.998643;DP=4652;DP4=2071,2243,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.48173e-11;MQSB=0.61732;RPB=0.96478;SGB=81.8956;VDB=0.402008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.2:8078340 chr02:008078340 0 W/8078340-8078340 FN4109-S SNP G -> T AC=1;AN=182;BQB=0.673489;DP=1885;DP4=1355,474,9,1;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000170588;MQSB=0.999283;RPB=0.994524;SGB=39.6007;VDB=0.512083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.2:8084369 chr02:008084369 0 W/8084369-8084369 FN1351-S Single Base Substitution C-T INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN-83.SNP.2:8089368 chr02:008089368 0 W/8089368-8089368 FN-83 Single Base Substitution G-A INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3332-S.SNP.2:8092089 chr02:008092089 0 W/8092089-8092089 FN3332-S SNP C -> T AC=2;AN=184;BQB=0.624569;DP=2685;DP4=1364,1182,11,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=4.39037e-09;MQSB=0.00824747;RPB=0.788322;SGB=70.9657;VDB=0.687161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.2:8096534 chr02:008096534 0 W/8096534-8096534 FN3364-S SNP A -> T AC=1;AN=184;BQB=0.982391;DP=3223;DP4=1394,1716,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000273507;MQSB=4.46682e-13;RPB=0.928183;SGB=35.1773;VDB=0.676899;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.2:8100182 chr02:008100182 0 W/8100182-8100182 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN4105-S.SNP.2:8100758 chr02:008100758 0 W/8100758-8100758 FN4105-S SNP T -> A AC=1;AN=182;BQB=0.938694;DP=3055;DP4=1373,1546,6,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.3554e-09;MQSB=0.573084;RPB=0.844202;SGB=56.6929;VDB=0.720337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.2:8101494 chr02:008101494 0 W/8101494-8101494 FN2574-S SNP C -> T AC=1;AN=198;BQB=0.99701;DP=4132;DP4=1830,2146,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00847047;MQB=0.218557;MQSB=1.84097e-05;RPB=0.696814;SGB=18.5788;VDB=0.528538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.2:8101667 chr02:008101667 0 W/8101667-8101667 FN2587-S SNP A -> G AC=1;AN=198;BQB=0.929278;DP=3719;DP4=1863,1602,10,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.03859e-14;MQSB=0.196979;RPB=0.318007;SGB=26.8957;VDB=0.86355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.2:8103032 chr02:008103032 0 W/8103032-8103032 FN2378 SNP T -> G AC=1;AN=192;BQB=0.0390143;DP=5958;DP4=2416,2883,7,18;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.00237542;MQSB=0;RPB=0.36362;SGB=-98.3669;VDB=0.789458;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.2:8103945 chr02:008103945 0 W/8103945-8103945 FN446-S Single Base Substitution C-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1696-S.SNP.2:8105163 chr02:008105163 0 W/8105163-8105163 FN1696-S SNP T -> A AC=2;AN=188;BQB=0.0298551;DP=3034;DP4=1310,1670,14,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.55903e-07;MQSB=0.998207;RPB=0.972927;SGB=-117.892;VDB=0.111568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.2:8107762 chr02:008107762 0 W/8107762-8107762 FN2335 SNP T -> C AC=1;AN=192;BQB=0.997892;DP=4335;DP4=1990,2025,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.28533e-14;MQSB=0.992821;RPB=0.760171;SGB=46.8644;VDB=0.264028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L366P|691|LOC_Os02g14700|protein_coding|CODING|LOC_Os02g14700.1|1|1) FN963-S.SNP.2:8121988 chr02:008121988 0 W/8121988-8121988 FN963-S Single Base Substitution T-C INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3567-S.SNP.2:8122160 chr02:008122160 0 W/8122160-8122160 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.696658;DP=2712;DP4=1189,1457,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4606e-05;MQSB=0.994605;RPB=0.977533;SGB=10.8165;VDB=0.0417261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.2:8122704 chr02:008122704 0 W/8122704-8122704 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.607647;DP=2588;DP4=1422,1111,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06429e-07;MQSB=0.987232;RPB=0.294558;SGB=28.6195;VDB=0.761533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.2:8129177 chr02:008129177 0 W/8129177-8129177 FN1213-S Single Base Substitution C-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN803-S.SNP.2:8131741 chr02:008131741 0 W/8131741-8131741 FN803-S Single Base Substitution T-G INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1065-S.SNP.2:8132699 chr02:008132699 0 W/8132699-8132699 FN1065-S Single Base Substitution G-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN242-S.SNP.2:8141526 chr02:008141526 0 W/8141526-8141526 FN242-S Single Base Substitution G-A INTRON HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN1625-S.SNP.2:8150934 chr02:008150934 0 W/8150934-8150934 FN1625-S Single Base Substitution C-A INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.2:8150934 chr02:008150934 0 W/8150934-8150934 FN1626-S SNP C -> A AC=1;AN=188;BQB=0.270217;DP=3082;DP4=1664,1359,19,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37348e-14;MQSB=0.99982;RPB=0.0822784;SGB=-385.889;VDB=0.204486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.2:8152735 chr02:008152735 0 W/8152735-8152735 FN1538-S Single Base Substitution C-T INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2562-S.SNP.2:8165973 chr02:008165973 0 W/8165973-8165973 FN2562-S SNP A -> C AC=1;AN=198;BQB=0.999929;DP=4323;DP4=1901,2140,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.67302e-10;MQSB=0.999183;RPB=0.931242;SGB=29.3443;VDB=0.956403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E169A|359|LOC_Os02g14760|protein_coding|CODING|LOC_Os02g14760.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E169A|332|LOC_Os02g14760|protein_coding|CODING|LOC_Os02g14760.2|2|1) FN560-S.SNP.2:8170172 chr02:008170172 0 W/8170172-8170172 FN560-S Single Base Substitution G-A INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1085-S.SNP.2:8185325 chr02:008185325 0 W/8185325-8185325 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN4229-S.SNP.2:8185346 chr02:008185346 0 W/8185346-8185346 FN4229-S SNP C -> T AC=2;AN=170;BQB=0.193939;DP=2280;DP4=1014,1218,6,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.69133e-09;MQSB=0.966364;RPB=0.315407;SGB=27.2119;VDB=0.403705;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.2:8185348 chr02:008185348 0 W/8185348-8185348 FN4229-S SNP T -> C AC=2;AN=170;BQB=0.999245;DP=2296;DP4=1010,1221,6,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.61227e-09;MQSB=0.962718;RPB=0.358795;SGB=45.206;VDB=0.485546;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.2:8185788 chr02:008185788 0 W/8185788-8185788 FN185-2_3_4 SNP C -> A AC=1;AN=188;BQB=0.00194895;DP=4061;DP4=2093,1932,16,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.77697e-07;MQSB=0.950442;RPB=0.682788;SGB=-187.338;VDB=0.153318;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.2:8186011 chr02:008186011 0 W/8186011-8186011 FN-132 Single Base Substitution G-T INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2541-S.SNP.2:8186455 chr02:008186455 0 W/8186455-8186455 FN2541-S SNP A -> G AC=2;AN=198;BQB=0.873437;DP=4092;DP4=1851,2072,22,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.28872e-20;MQSB=0.992771;RPB=0.220894;SGB=119.242;VDB=0.901578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.2:8189832 chr02:008189832 0 W/8189832-8189832 FN1600-S Single Base Substitution G-A INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2095-S.SNP.2:8198151 chr02:008198151 0 W/8198151-8198151 FN2095-S SNP C -> T AC=2;AN=168;BQB=0.874266;DP=2646;DP4=1411,1161,31,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.42993e-25;MQSB=0.970772;RPB=0.183138;SGB=70.9;VDB=0.920516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R371C|792|LOC_Os02g14780|protein_coding|CODING|LOC_Os02g14780.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R371C|792|LOC_Os02g14780|protein_coding|CODING|LOC_Os02g14780.2|1|1) FN3838-S.SNP.2:8208532 chr02:008208532 0 W/8208532-8208532 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.977577;DP=2747;DP4=1495,1162,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000364034;MQB=3.56993e-06;MQSB=0.978108;RPB=0.96521;SGB=28.9929;VDB=0.659761;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.2:8211530 chr02:008211530 0 W/8211530-8211530 FN937-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2216-S.SNP.2:8217921 chr02:008217921 0 W/8217921-8217921 FN2216-S SNP T -> A AC=1;AN=190;BQB=0.956986;DP=5423;DP4=3097,1941,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12768e-13;MQSB=0.976562;RPB=0.1147;SGB=18.096;VDB=0.168287;EFF=UTR_3_PRIME(MODIFIER||4569||120|LOC_Os02g14800|protein_coding|CODING|LOC_Os02g14800.4|5|1),INTRON(MODIFIER||||201|LOC_Os02g14800|protein_coding|CODING|LOC_Os02g14800.3|6|1),INTRON(MODIFIER||||120|LOC_Os02g14800|protein_coding|CODING|LOC_Os02g14800.5|4|1) FN932-S.SNP.2:8221942 chr02:008221942 0 W/8221942-8221942 FN932-S Single Base Substitution C-T INTRON HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2675-S.SNP.2:8223886 chr02:008223886 0 W/8223886-8223886 FN2675-S SNP G -> A AC=2;AN=200;BQB=0.910922;DP=4345;DP4=2184,1944,14,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.70631e-21;MQSB=0.906462;RPB=0.897099;SGB=123.188;VDB=0.506453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.2:8224809 chr02:008224809 0 W/8224809-8224809 FN3679-S SNP G -> A AC=2;AN=190;BQB=0.987632;DP=2259;DP4=924,1239,12,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.01316e-17;MQSB=0.233722;RPB=0.980599;SGB=103.624;VDB=0.0198668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:8238233 chr02:008238233 0 W/8238233-8238233 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.954554;DP=2650;DP4=1188,1263,4,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.23215e-07;MQSB=0.909929;RPB=0.113434;SGB=40.8124;VDB=0.381728;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.2:8241437 chr02:008241437 0 W/8241437-8241437 FN-223 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g14830 expressed protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN1337-S.SNP.2:8241872 chr02:008241872 0 W/8241872-8241872 FN1337-S Single Base Substitution A-G INTRON HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN488-S.SNP.2:8253107 chr02:008253107 0 W/8253107-8253107 FN488-S Single Base Substitution T-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3504-S.SNP.2:8255173 chr02:008255173 0 W/8255173-8255173 FN3504-S SNP A -> G AC=1;AN=188;BQB=0.992522;DP=2536;DP4=1234,1229,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.66495e-08;MQSB=0.397263;RPB=0.819901;SGB=62.6088;VDB=0.403762;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.2:8261090 chr02:008261090 0 W/8261090-8261090 FN4173-S SNP G -> A AC=1;AN=170;BQB=0.999564;DP=2018;DP4=848,1092,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.21216e-06;MQSB=0.682479;RPB=0.972745;SGB=27.9928;VDB=0.120659;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.2:8272077 chr02:008272077 0 W/8272077-8272077 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN996-S.SNP.2:8275180 chr02:008275180 0 W/8275180-8275180 FN996-S Single Base Substitution C-T INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN930-S.SNP.2:8275315 chr02:008275315 0 W/8275315-8275315 FN930-S Single Base Substitution A-T INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN3311-S.SNP.2:8276402 chr02:008276402 0 W/8276402-8276402 FN3311-S SNP A -> G AC=1;AN=184;BQB=0.320085;DP=3113;DP4=1582,1408,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.5202e-08;MQSB=0.913383;RPB=0.617444;SGB=30.8405;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.2:8278598 chr02:008278598 0 W/8278598-8278598 FN584-S Single Base Substitution T-G INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1685-S.SNP.2:8278734 chr02:008278734 0 W/8278734-8278734 FN1685-S SNP G -> A AC=1;AN=188;BQB=0.695957;DP=3838;DP4=1851,1936,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.63155e-15;MQSB=0.792615;RPB=0.879036;SGB=-7.39363;VDB=0.431879;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.2:8283712 chr02:008283712 0 W/8283712-8283712 FN767-S Single Base Substitution G-C INTERGENIC HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2085-S.SNP.2:8289236 chr02:008289236 0 W/8289236-8289236 FN2085-S SNP A -> C AC=1;AN=168;BQB=0.938323;DP=2785;DP4=1033,1698,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06911e-11;MQSB=0.715121;RPB=0.337309;SGB=65.6253;VDB=0.14304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.2:8294343 chr02:008294343 0 W/8294343-8294343 FN3525-S SNP G -> T AC=1;AN=188;BQB=0.964541;DP=2604;DP4=1122,1417,2,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=2.5021e-05;MQSB=0.410502;RPB=0.696611;SGB=48.979;VDB=0.338575;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.2:8296498 chr02:008296498 0 W/8296498-8296498 FN1366-S Single Base Substitution G-C INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2692-S.SNP.2:8298771 chr02:008298771 0 W/8298771-8298771 FN2692-S SNP T -> C AC=1;AN=200;BQB=0.99707;DP=5131;DP4=2517,2431,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1822e-07;MQSB=0.846275;RPB=0.749693;SGB=29.4849;VDB=0.844276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.2:8303639 chr02:008303639 0 W/8303639-8303639 FN2351 SNP C -> T AC=1;AN=192;BQB=0.223135;DP=5125;DP4=2285,2541,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.905e-12;MQSB=0.770758;RPB=0.356263;SGB=-93.4956;VDB=0.590911;EFF=INTRON(MODIFIER||||1366|LOC_Os02g14900|protein_coding|CODING|LOC_Os02g14900.1|9|1) FN1163-S.SNP.2:8308357 chr02:008308357 0 W/8308357-8308357 FN1163-S Single Base Substitution T-C INTRON HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3407-S.SNP.2:8321056 chr02:008321056 0 W/8321056-8321056 FN3407-S SNP C -> A AC=2;AN=184;BQB=0.855895;DP=2525;DP4=1354,1098,8,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.32603e-07;MQSB=0.98793;RPB=0.254245;SGB=39.2697;VDB=0.435222;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.2:8322572 chr02:008322572 0 W/8322572-8322572 FN-113 Single Base Substitution A-T INTERGENIC HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN3581-S.SNP.2:8335348 chr02:008335348 0 W/8335348-8335348 FN3581-S SNP T -> A AC=2;AN=190;BQB=0.672951;DP=2875;DP4=1330,1359,16,12;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0.0469565;MQB=0.905602;MQSB=4.18252e-05;RPB=0.479137;SGB=89.4087;VDB=0.0332347;EFF=INTRON(MODIFIER||||559|LOC_Os02g14929|protein_coding|CODING|LOC_Os02g14929.1|5|1) FN2577-S.SNP.2:8335629 chr02:008335629 0 W/8335629-8335629 FN2577-S SNP A -> G AC=1;AN=198;BQB=0.921384;DP=3880;DP4=1824,1896,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00489691;MQB=2.5679e-06;MQSB=0.722715;RPB=0.418742;SGB=32.9588;VDB=0.758664;EFF=INTRON(MODIFIER||||559|LOC_Os02g14929|protein_coding|CODING|LOC_Os02g14929.1|5|1) FN-409.SNP.2:8344704 chr02:008344704 0 W/8344704-8344704 FN-409 Single Base Substitution A-T INTERGENIC HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN2390.SNP.2:8350168 chr02:008350168 0 W/8350168-8350168 FN2390 SNP C -> A AC=2;AN=200;BQB=0.940611;DP=4922;DP4=2022,2443,26,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.37723e-33;MQSB=0.983433;RPB=0.919547;SGB=270.708;VDB=0.914559;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.2:8351796 chr02:008351796 0 W/8351796-8351796 FN_769-4-1 Single Base Substitution T-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2370.SNP.2:8351902 chr02:008351902 0 W/8351902-8351902 FN2370 SNP A -> T AC=1;AN=192;BQB=0.992061;DP=4856;DP4=2258,2282,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.61794e-07;MQSB=0.74909;RPB=0.892422;SGB=43.3444;VDB=0.131827;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T131|214|LOC_Os02g14970|protein_coding|CODING|LOC_Os02g14970.1|2|1) FN3855-S.SNP.2:8353590 chr02:008353590 0 W/8353590-8353590 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.914305;DP=1718;DP4=802,854,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0261932;MQB=0.00126311;MQSB=0.00498057;RPB=0.97098;SGB=60.1755;VDB=0.412108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.2:8355350 chr02:008355350 0 W/8355350-8355350 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.854279;DP=4987;DP4=2359,2393,10,9;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.256667;MQB=0.382876;MQSB=0;RPB=0.919463;SGB=11.0951;VDB=0.152554;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.2:8375002 chr02:008375002 0 W/8375002-8375002 FN971-S Single Base Substitution T-C INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN522-S.SNP.2:8375321 chr02:008375321 0 W/8375321-8375321 FN522-S Single Base Substitution G-T INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN522-S.SNP.2:8375322 chr02:008375322 0 W/8375322-8375322 FN522-S Single Base Substitution A-T INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN-236.SNP.2:8379880 chr02:008379880 0 W/8379880-8379880 FN-236 Single Base Substitution T-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-236.SNP.2:8379910 chr02:008379910 0 W/8379910-8379910 FN-236 Single Base Substitution C-T INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3601-S.SNP.2:8381817 chr02:008381817 0 W/8381817-8381817 FN3601-S SNP C -> G AC=1;AN=190;BQB=0.97209;DP=2396;DP4=1151,1152,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7944e-06;MQSB=0.995157;RPB=0.98052;SGB=44.5415;VDB=0.417004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.2:8384036 chr02:008384036 0 W/8384036-8384036 FN1572-S Single Base Substitution C-T INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3319-S.SNP.2:8388572 chr02:008388572 0 W/8388572-8388572 FN3319-S SNP A -> T AC=1;AN=184;BQB=0.998284;DP=3183;DP4=1480,1602,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.8007e-11;MQSB=0.955879;RPB=0.516169;SGB=56.8786;VDB=0.0236939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.2:8392157 chr02:008392157 0 W/8392157-8392157 FN2794-S SNP C -> T AC=2;AN=198;BQB=0.412088;DP=3738;DP4=1468,1894,19,23;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=7.86644e-17;MQSB=0.934355;RPB=0.311025;SGB=47.6323;VDB=0.383565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.2:8402922 chr02:008402922 0 W/8402922-8402922 FN1572-S Single Base Substitution G-A STOP_GAINED Homo LOC_Os02g15070 glutelin, putative, expressed SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1292-S.SNP.2:8406618 chr02:008406618 0 W/8406618-8406618 FN1292-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2595-S.SNP.2:8412687 chr02:008412687 0 W/8412687-8412687 FN2595-S SNP G -> A AC=2;AN=198;BQB=0.374861;DP=4076;DP4=1811,1935,19,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000245339;MQB=1.0572e-24;MQSB=0.996055;RPB=0.0683102;SGB=54.0128;VDB=0.39801;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.2:8421751 chr02:008421751 0 W/8421751-8421751 FN3396-S SNP A -> T AC=2;AN=184;BQB=0.985252;DP=2524;DP4=1180,1275,3,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.56484e-09;MQSB=0.996801;RPB=0.679094;SGB=39.2697;VDB=0.219351;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.2:8427881 chr02:008427881 0 W/8427881-8427881 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN775-S.SNP.2:8429575 chr02:008429575 0 W/8429575-8429575 FN775-S Single Base Substitution A-C INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN775-S.SNP.2:8429576 chr02:008429576 0 W/8429576-8429576 FN775-S Single Base Substitution C-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-238.SNP.2:8431022 chr02:008431022 0 W/8431022-8431022 FN-238 Single Base Substitution G-A INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-275.SNP.2:8434185 chr02:008434185 0 W/8434185-8434185 FN-275 Single Base Substitution A-T INTRON HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3890-S.SNP.2:8439651 chr02:008439651 0 W/8439651-8439651 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.99121;DP=2498;DP4=1277,1094,30,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.65644e-24;MQSB=0.939719;RPB=0.339656;SGB=207.756;VDB=0.687943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.2:8443091 chr02:008443091 0 W/8443091-8443091 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.866262;DP=4821;DP4=2285,2286,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85463e-13;MQSB=0.88957;RPB=0.745649;SGB=65.5058;VDB=0.946033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.2:8443748 chr02:008443748 0 W/8443748-8443748 FN1069-S Single Base Substitution C-T INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2619-S.SNP.2:8451105 chr02:008451105 0 W/8451105-8451105 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.815965;DP=4096;DP4=1821,2039,19,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22852e-19;MQSB=0.882268;RPB=0.835999;SGB=-133.918;VDB=0.942593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.2:8464518 chr02:008464518 0 W/8464518-8464518 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.971821;DP=3099;DP4=1506,1490,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000968054;MQB=1.14802e-07;MQSB=0.0102661;RPB=0.889798;SGB=46.7622;VDB=0.960785;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.2:8470659 chr02:008470659 0 W/8470659-8470659 FN666-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g15190 retrotransposon protein, putative, unclassified, expressed SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN666-S.SNP.2:8470660 chr02:008470660 0 W/8470660-8470660 FN666-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2538-S.SNP.2:8471348 chr02:008471348 0 W/8471348-8471348 FN2538-S SNP C -> T AC=2;AN=198;BQB=0.442502;DP=3922;DP4=1886,1800,21,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000254972;MQB=5.96546e-22;MQSB=0.975419;RPB=0.714765;SGB=102.008;VDB=0.275702;EFF=INTRON(MODIFIER||||470|LOC_Os02g15190|protein_coding|CODING|LOC_Os02g15190.1|2|1) FN772-S.SNP.2:8476490 chr02:008476490 0 W/8476490-8476490 FN772-S Single Base Substitution A-G INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3864-S.SNP.2:8477017 chr02:008477017 0 W/8477017-8477017 FN3864-S SNP G -> T AC=1;AN=158;BQB=0.994228;DP=2271;DP4=1141,1042,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.76413e-06;MQSB=0.927068;RPB=0.96812;SGB=42.6978;VDB=0.144698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.2:8482121 chr02:008482121 0 W/8482121-8482121 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.999511;DP=3839;DP4=1616,1852,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000260484;MQB=3.96614e-06;MQSB=0.840997;RPB=0.0995293;SGB=29.3637;VDB=0.244899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.2:8493450 chr02:008493450 0 W/8493450-8493450 FN2202-S SNP T -> C AC=1;AN=190;BQB=0.99938;DP=5241;DP4=2484,2445,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.23812e-13;MQSB=0.927284;RPB=0.78525;SGB=99.1879;VDB=0.799022;EFF=INTRON(MODIFIER||||656|LOC_Os02g15220|protein_coding|CODING|LOC_Os02g15220.1|4|1),INTRON(MODIFIER||||656|LOC_Os02g15220|protein_coding|CODING|LOC_Os02g15220.2|4|1),INTRON(MODIFIER||||624|LOC_Os02g15220|protein_coding|CODING|LOC_Os02g15220.4|3|1) FN2113-S.SNP.2:8502166 chr02:008502166 0 W/8502166-8502166 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.163194;DP=1878;DP4=937,907,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000681144;MQSB=0.574797;RPB=0.00361291;SGB=7.59999;VDB=0.0159125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G95S|244|LOC_Os02g15230|protein_coding|CODING|LOC_Os02g15230.2|1|1),INTRON(MODIFIER||||382|LOC_Os02g15230|protein_coding|CODING|LOC_Os02g15230.1|1|1),INTRON(MODIFIER||||217|LOC_Os02g15230|protein_coding|CODING|LOC_Os02g15230.3|1|1) FN-380.SNP.2:8506439 chr02:008506439 0 W/8506439-8506439 FN-380 Single Base Substitution C-T INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2284.SNP.2:8521974 chr02:008521974 0 W/8521974-8521974 FN2284 SNP C -> T AC=1;AN=192;BQB=0.19025;DP=5275;DP4=2426,2613,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12065e-08;MQSB=0.978244;RPB=0.240661;SGB=-36.6348;VDB=0.0303823;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.2:8535015 chr02:008535015 0 W/8535015-8535015 FN-248 Single Base Substitution C-T INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2370.SNP.2:8552028 chr02:008552028 0 W/8552028-8552028 FN2370 SNP T -> C AC=1;AN=192;BQB=0.397422;DP=5121;DP4=2597,2234,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.24873e-07;MQSB=0.943223;RPB=0.572178;SGB=-35.3278;VDB=0.881008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.2:8560582 chr02:008560582 0 W/8560582-8560582 FN3948-S SNP T -> C AC=1;AN=168;BQB=0.742546;DP=2246;DP4=1017,1107,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0;MQB=0.0024552;MQSB=4.81021e-09;RPB=0.208528;SGB=43.3113;VDB=0.236165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.2:8560780 chr02:008560780 0 W/8560780-8560780 FN2089-S SNP C -> T AC=1;AN=168;BQB=0.680214;DP=3544;DP4=1797,1715,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.17487e-10;MQSB=0.96622;RPB=0.393749;SGB=-40.6433;VDB=0.134098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.2:8560948 chr02:008560948 0 W/8560948-8560948 FN2089-S SNP A -> T AC=1;AN=168;BQB=0.461607;DP=3446;DP4=1507,1900,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2971e-10;MQSB=0.859652;RPB=0.138368;SGB=-12.7876;VDB=0.235233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.2:8562485 chr02:008562485 0 W/8562485-8562485 FN3857-S SNP T -> G AC=1;AN=158;BQB=0.927353;DP=2565;DP4=1266,1155,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=1.92515e-05;MQSB=0.871802;RPB=0.509335;SGB=51.4366;VDB=0.856873;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.2:8579524 chr02:008579524 0 W/8579524-8579524 FN266-S Single Base Substitution C-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3411-S.SNP.2:8588329 chr02:008588329 0 W/8588329-8588329 FN3411-S SNP A -> G AC=2;AN=184;BQB=0.324873;DP=2940;DP4=1307,1511,12,15;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=4.22212e-10;MQSB=0.00130205;RPB=0.0465975;SGB=-41.0125;VDB=0.882461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.2:8591732 chr02:008591732 0 W/8591732-8591732 FN2370 SNP C -> T AC=1;AN=192;BQB=0.301618;DP=4569;DP4=2183,2047,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=2.08472e-06;MQSB=5.61876e-06;RPB=0.368691;SGB=12.0478;VDB=0.19611;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P9|373|LOC_Os02g15350|protein_coding|CODING|LOC_Os02g15350.1|2|1) FN354-S.SNP.2:8603412 chr02:008603412 0 W/8603412-8603412 FN354-S Single Base Substitution T-C INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN4081-S.SNP.2:8610466 chr02:008610466 0 W/8610466-8610466 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.958536;DP=3347;DP4=1612,1654,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.07671e-09;MQSB=0.956401;RPB=0.635118;SGB=57.644;VDB=0.899249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T207M|349|LOC_Os02g15400|protein_coding|CODING|LOC_Os02g15400.1|1|1) FN-98.SNP.2:8613306 chr02:008613306 0 W/8613306-8613306 FN-98 Single Base Substitution T-C INTERGENIC HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN3366-S.SNP.2:8617755 chr02:008617755 0 W/8617755-8617755 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.858095;DP=2610;DP4=1202,1293,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59723e-10;MQSB=0.989816;RPB=0.952882;SGB=30.8405;VDB=0.20826;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.2:8619138 chr02:008619138 0 W/8619138-8619138 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1124-S.SNP.2:8620687 chr02:008620687 0 W/8620687-8620687 FN1124-S Single Base Substitution C-T INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1345-S.SNP.2:8624779 chr02:008624779 0 W/8624779-8624779 FN1345-S Single Base Substitution G-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1027-S.SNP.2:8636717 chr02:008636717 0 W/8636717-8636717 FN1027-S Single Base Substitution G-C INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3968-S.SNP.2:8639469 chr02:008639469 0 W/8639469-8639469 FN3968-S SNP C -> G AC=1;AN=168;BQB=0.89603;DP=2809;DP4=1419,1275,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.63222e-08;MQSB=0.859047;RPB=0.299465;SGB=69.8961;VDB=0.611754;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.2:8640446 chr02:008640446 0 W/8640446-8640446 FN4148-S SNP C -> T AC=2;AN=170;BQB=0.874084;DP=2308;DP4=1171,1067,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.68978e-13;MQSB=0.999005;RPB=0.886043;SGB=87.856;VDB=0.10976;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S671|710|LOC_Os02g15430|protein_coding|CODING|LOC_Os02g15430.1|5|1) FN1150-S.SNP.2:8640769 chr02:008640769 0 W/8640769-8640769 FN1150-S Single Base Substitution C-A INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2305.SNP.2:8641309 chr02:008641309 0 W/8641309-8641309 FN2305 SNP A -> T AC=1;AN=192;BQB=0.808742;DP=5033;DP4=2430,2266,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.93311e-10;MQSB=0.991687;RPB=0.877113;SGB=12.0478;VDB=0.252765;EFF=INTRON(MODIFIER||||710|LOC_Os02g15430|protein_coding|CODING|LOC_Os02g15430.1|3|1) FN434-S.SNP.2:8643788 chr02:008643788 0 W/8643788-8643788 FN434-S Single Base Substitution A-G INTRON HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN2455.SNP.2:8649397 chr02:008649397 0 W/8649397-8649397 FN2455 SNP G -> A AC=1;AN=200;BQB=0.934126;DP=4509;DP4=2208,1870,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.29163e-10;MQSB=0.964613;RPB=0.90718;SGB=11.0951;VDB=0.403251;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.2:8678152 chr02:008678152 0 W/8678152-8678152 FN1345-S Single Base Substitution A-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1252-S.SNP.2:8687255 chr02:008687255 0 W/8687255-8687255 FN1252-S Single Base Substitution C-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. W423-5-1.SNP.2:8692416 chr02:008692416 0 W/8692416-8692416 W423-5-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN1094-S.SNP.2:8693012 chr02:008693012 0 W/8693012-8693012 FN1094-S Single Base Substitution A-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3492-S.SNP.2:8701545 chr02:008701545 0 W/8701545-8701545 FN3492-S SNP C -> A AC=1;AN=184;BQB=0.980249;DP=2684;DP4=1292,1324,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45849e-05;MQSB=0.94228;RPB=0.987797;SGB=39.699;VDB=0.698224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W324L|618|LOC_Os02g15520|protein_coding|CODING|LOC_Os02g15520.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W324L|618|LOC_Os02g15520|protein_coding|CODING|LOC_Os02g15520.1|1|1) FN4179-S.SNP.2:8708922 chr02:008708922 0 W/8708922-8708922 FN4179-S SNP C -> A AC=1;AN=170;BQB=0.989939;DP=2282;DP4=1094,1105,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.23084e-09;MQSB=0.883065;RPB=0.99674;SGB=24.7692;VDB=0.881906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.2:8709431 chr02:008709431 0 W/8709431-8709431 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN1624-S.SNP.2:8709671 chr02:008709671 0 W/8709671-8709671 FN1624-S Single Base Substitution T-C INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1384-S.SNP.2:8715098 chr02:008715098 0 W/8715098-8715098 FN1384-S Single Base Substitution A-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3418-S.SNP.2:8715316 chr02:008715316 0 W/8715316-8715316 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.976869;DP=2800;DP4=1565,1144,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.45896e-05;MQSB=0.745271;RPB=0.941584;SGB=35.1773;VDB=0.201452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.2:8717488 chr02:008717488 0 W/8717488-8717488 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.980199;DP=4535;DP4=2057,2230,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.5629e-09;MQSB=0.980376;RPB=0.746703;SGB=68.0801;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.2:8753160 chr02:008753160 0 W/8753160-8753160 FN2784-S SNP A -> G AC=1;AN=198;BQB=0.115846;DP=4188;DP4=2045,1938,10,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.19461e-14;MQSB=0.601406;RPB=0.914294;SGB=76.1002;VDB=0.990836;EFF=INTRON(MODIFIER||||498|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.1|1|1),INTRON(MODIFIER||||475|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.2|3|1),INTRON(MODIFIER||||386|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.3|3|1) FN4065-S.SNP.2:8753630 chr02:008753630 0 W/8753630-8753630 FN4065-S SNP G -> A AC=2;AN=168;BQB=0.775057;DP=2617;DP4=1203,1319,5,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.79379e-12;MQSB=0.941297;RPB=0.379773;SGB=34.3388;VDB=0.535947;EFF=INTRON(MODIFIER||||498|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.1|1|1),INTRON(MODIFIER||||475|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.2|3|1),INTRON(MODIFIER||||386|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.3|3|1) FN4065-S.SNP.2:8753631 chr02:008753631 0 W/8753631-8753631 FN4065-S SNP T -> A AC=2;AN=168;BQB=0.97369;DP=2616;DP4=1202,1333,5,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44089e-12;MQSB=0.911387;RPB=0.537758;SGB=78.7577;VDB=0.627504;EFF=INTRON(MODIFIER||||498|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.1|1|1),INTRON(MODIFIER||||475|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.2|3|1),INTRON(MODIFIER||||386|LOC_Os02g15580|protein_coding|CODING|LOC_Os02g15580.3|3|1) FN2780-S.SNP.2:8757855 chr02:008757855 0 W/8757855-8757855 FN2780-S SNP A -> G AC=1;AN=198;BQB=0.924162;DP=4357;DP4=2330,1763,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.50619e-08;MQSB=0.909023;RPB=0.859867;SGB=43.7442;VDB=0.74512;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.2:8758003 chr02:008758003 0 W/8758003-8758003 FN1180-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3757-S.SNP.2:8758003 chr02:008758003 0 W/8758003-8758003 FN3757-S SNP C -> A AC=2;AN=190;BQB=0.492817;DP=2502;DP4=1002,1437,8,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.30806e-13;MQSB=0.977059;RPB=0.593247;SGB=21.2038;VDB=0.262047;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.2:8758003 chr02:008758003 0 W/8758003-8758003 FN3991-S SNP C -> A AC=2;AN=168;BQB=0.537242;DP=2389;DP4=958,1342,9,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.82818e-15;MQSB=0.999293;RPB=0.524698;SGB=-11.926;VDB=0.286464;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.2:8759141 chr02:008759141 0 W/8759141-8759141 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.605604;DP=3577;DP4=1586,1739,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.44946e-09;MQSB=0.952765;RPB=0.998994;SGB=57.786;VDB=0.351645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.2:8764778 chr02:008764778 0 W/8764778-8764778 FN2388 SNP A -> G AC=1;AN=200;BQB=0.974107;DP=4708;DP4=1973,2317,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.7562e-15;MQSB=0.674302;RPB=0.873288;SGB=-8.26887;VDB=0.480218;EFF=INTRON(MODIFIER||||363|LOC_Os02g15594|protein_coding|CODING|LOC_Os02g15594.1|4|1) FN850-S.SNP.2:8764891 chr02:008764891 0 W/8764891-8764891 FN850-S Single Base Substitution C-A INTRON HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN990-S.SNP.2:8771670 chr02:008771670 0 W/8771670-8771670 FN990-S Single Base Substitution T-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-212.SNP.2:8784427 chr02:008784427 0 W/8784427-8784427 FN-212 Single Base Substitution C-T INTRON HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2196-S.SNP.2:8793772 chr02:008793772 0 W/8793772-8793772 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.958122;DP=2926;DP4=2100,642,14,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.17433e-09;MQSB=0.285386;RPB=0.909046;SGB=26.2136;VDB=0.1172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.2:8798496 chr02:008798496 0 W/8798496-8798496 FN2637-S SNP T -> C AC=2;AN=200;BQB=0.873801;DP=4390;DP4=2097,2121,19,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.15043e-24;MQSB=0.964776;RPB=0.14774;SGB=134.004;VDB=0.93179;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.2:8807055 chr02:008807055 0 W/8807055-8807055 FN1265-S Single Base Substitution G-A INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN4125-S.SNP.2:8813917 chr02:008813917 0 W/8813917-8813917 FN4125-S SNP C -> A AC=2;AN=182;BQB=0.995374;DP=2551;DP4=1283,1208,10,16;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=6.31771e-09;MQSB=0.791337;RPB=0.999453;SGB=111.774;VDB=0.895045;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E18*|813|LOC_Os02g15660|protein_coding|CODING|LOC_Os02g15660.1|1|1);LOF=(LOC_Os02g15660|LOC_Os02g15660|1|1.00);NMD=(LOC_Os02g15660|LOC_Os02g15660|1|1.00) FN-336.SNP.2:8817414 chr02:008817414 0 W/8817414-8817414 FN-336 Single Base Substitution T-G INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2122-S.SNP.2:8839659 chr02:008839659 0 W/8839659-8839659 FN2122-S SNP C -> T AC=1;AN=168;BQB=0.350363;DP=3992;DP4=2096,1861,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76978e-11;MQSB=0.996288;RPB=0.519077;SGB=-41.7816;VDB=0.61149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.2:8840587 chr02:008840587 0 W/8840587-8840587 FN3885-S SNP A -> G AC=2;AN=158;BQB=0.781954;DP=1271;DP4=530,626,13,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.78872e-08;MQSB=0.862765;RPB=0.764952;SGB=30.927;VDB=0.480465;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.2:8841815 chr02:008841815 0 W/8841815-8841815 FN3829-S SNP T -> A AC=1;AN=190;BQB=0.75033;DP=2710;DP4=1298,1321,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76893e-11;MQSB=0.996575;RPB=0.574158;SGB=64.5316;VDB=0.200912;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.2:8845176 chr02:008845176 0 W/8845176-8845176 FN1546-S Single Base Substitution C-A INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN4165-S.SNP.2:8845839 chr02:008845839 0 W/8845839-8845839 FN4165-S SNP C -> A AC=2;AN=170;BQB=0.908448;DP=2157;DP4=906,1129,16,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.12841e-14;MQSB=0.0258887;RPB=0.876538;SGB=89.9604;VDB=0.475334;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.2:8846598 chr02:008846598 0 W/8846598-8846598 FN-89 Single Base Substitution C-T INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN570-S.SNP.2:8847343 chr02:008847343 0 W/8847343-8847343 FN570-S Single Base Substitution C-G INTERGENIC HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3511-S.SNP.2:8853945 chr02:008853945 0 W/8853945-8853945 FN3511-S SNP C -> A AC=1;AN=188;BQB=0.900961;DP=3185;DP4=1512,1589,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.40946e-05;MQSB=0.0388596;RPB=0.541022;SGB=35.3493;VDB=0.822117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.2:8858018 chr02:008858018 0 W/8858018-8858018 FN2758-S SNP T -> G AC=2;AN=200;BQB=0.945204;DP=4916;DP4=2276,2396,15,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.49496e-21;MQSB=0.99987;RPB=0.628228;SGB=108.768;VDB=0.857593;EFF=INTRON(MODIFIER||||316|LOC_Os02g15720|protein_coding|CODING|LOC_Os02g15720.1|2|1) FN2461.SNP.2:8862708 chr02:008862708 0 W/8862708-8862708 FN2461 SNP G -> T AC=1;AN=200;BQB=0.948904;DP=4980;DP4=2327,2306,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.90403e-07;MQSB=0.389649;RPB=0.45756;SGB=29.4541;VDB=0.564844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.2:8866651 chr02:008866651 0 W/8866651-8866651 FN1029-S Single Base Substitution T-C INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-382.SNP.2:8867963 chr02:008867963 0 W/8867963-8867963 FN-382 Single Base Substitution A-C INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN3459-S.SNP.2:8872663 chr02:008872663 0 W/8872663-8872663 FN3459-S SNP C -> T AC=2;AN=184;BQB=0.643842;DP=2891;DP4=1597,1167,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.90418e-12;MQSB=0.929576;RPB=0.851814;SGB=112.047;VDB=0.0589201;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.2:8877126 chr02:008877126 0 W/8877126-8877126 FN825-S Single Base Substitution A-G INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-92.SNP.2:8879626 chr02:008879626 0 W/8879626-8879626 FN-92 Single Base Substitution T-C INTRON HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN486-S.SNP.2:8885142 chr02:008885142 0 W/8885142-8885142 FN486-S Single Base Substitution G-C INTERGENIC HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4050-S.SNP.2:8894771 chr02:008894771 0 W/8894771-8894771 FN4050-S SNP G -> A AC=1;AN=168;BQB=0.598007;DP=1923;DP4=831,941,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.96689e-08;MQSB=0.000844539;RPB=0.373059;SGB=-14.5109;VDB=0.17451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D93N|204|LOC_Os02g15770|protein_coding|CODING|LOC_Os02g15770.1|1|1) FN1640-S.SNP.2:8897338 chr02:008897338 0 W/8897338-8897338 FN1640-S Single Base Substitution A-T INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN-286.SNP.2:8897862 chr02:008897862 0 W/8897862-8897862 FN-286 Single Base Substitution A-T INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN4098-S.SNP.2:8903958 chr02:008903958 0 W/8903958-8903958 FN4098-S SNP C -> T AC=2;AN=182;BQB=0.943308;DP=2562;DP4=1365,1122,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.50058e-12;MQSB=0.919853;RPB=0.977535;SGB=70.7363;VDB=0.485234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.2:8906321 chr02:008906321 0 W/8906321-8906321 FN1080-S Single Base Substitution A-G INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2291.SNP.2:8906836 chr02:008906836 0 W/8906836-8906836 FN2291 SNP A -> G AC=1;AN=192;BQB=0.962491;DP=4906;DP4=2267,2320,24,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203832;MQB=1.33561e-26;MQSB=0.479585;RPB=0.575075;SGB=51.1566;VDB=0.112411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.2:8909730 chr02:008909730 0 W/8909730-8909730 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.950556;DP=2906;DP4=1198,1469,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.69389e-06;MQSB=0.986908;RPB=0.935238;SGB=44.2207;VDB=0.951399;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.2:8918116 chr02:008918116 0 W/8918116-8918116 FN-226 Single Base Substitution A-G INTRON HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2210-S.SNP.2:8927355 chr02:008927355 0 W/8927355-8927355 FN2210-S SNP T -> C AC=1;AN=190;BQB=0.551797;DP=4094;DP4=2264,1537,11,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00024426;MQB=0.00134143;MQSB=0.959935;RPB=0.993071;SGB=32.5467;VDB=0.821467;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.2:8932331 chr02:008932331 0 W/8932331-8932331 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.999437;DP=2649;DP4=1219,1353,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.70996e-10;MQSB=0.859192;RPB=0.317834;SGB=23.8187;VDB=0.4157;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.2:8935679 chr02:008935679 0 W/8935679-8935679 FN819-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g15810 HMG1/2, putative, expressed SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2547-S.SNP.2:8936276 chr02:008936276 0 W/8936276-8936276 FN2547-S SNP A -> C AC=1;AN=198;BQB=0.985842;DP=3478;DP4=1790,1324,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00251761;MQSB=0.986847;RPB=0.569592;SGB=5.98864;VDB=0.547491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L218R|504|LOC_Os02g15810|protein_coding|CODING|LOC_Os02g15810.1|3|1) FN1297-S.SNP.2:8939059 chr02:008939059 0 W/8939059-8939059 FN1297-S Single Base Substitution G-C INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1156-S.SNP.2:8946458 chr02:008946458 0 W/8946458-8946458 FN1156-S Single Base Substitution A-T INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1156-S.SNP.2:8946459 chr02:008946459 0 W/8946459-8946459 FN1156-S Single Base Substitution A-T INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3626-S.SNP.2:8951089 chr02:008951089 0 W/8951089-8951089 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.999549;DP=2576;DP4=1218,1257,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.90143e-05;MQSB=0.61612;RPB=0.514658;SGB=35.4339;VDB=0.228571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:8952415 chr02:008952415 0 W/8952415-8952415 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.665969;DP=4572;DP4=2329,1978,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34013e-11;MQSB=0.99345;RPB=0.956083;SGB=34.6953;VDB=0.3141;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.2:8957402 chr02:008957402 0 W/8957402-8957402 FN-228 Single Base Substitution C-T INTERGENIC HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2547-S.SNP.2:8961789 chr02:008961789 0 W/8961789-8961789 FN2547-S SNP A -> T AC=1;AN=198;BQB=0.169811;DP=3816;DP4=1775,1769,2,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.1922e-05;MQSB=0.62781;RPB=0.432651;SGB=-16.8114;VDB=0.0203414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.2:8962221 chr02:008962221 0 W/8962221-8962221 FN2172-S SNP A -> G AC=1;AN=168;BQB=0.0238007;DP=4201;DP4=2315,1843,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00785527;MQB=1.21298e-05;MQSB=0;RPB=0.961696;SGB=14.2064;VDB=0.633648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.2:8962441 chr02:008962441 0 W/8962441-8962441 FN2217-S SNP A -> T AC=1;AN=190;BQB=0.963687;DP=4808;DP4=2306,2257,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0193428;MQB=3.93609e-05;MQSB=0.691618;RPB=0.535934;SGB=62.7569;VDB=0.310509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.2:8962450 chr02:008962450 0 W/8962450-8962450 FN2217-S SNP T -> A AC=1;AN=190;BQB=0.967678;DP=4816;DP4=2293,2152,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0170266;MQB=4.05609e-05;MQSB=0.0265281;RPB=0.998432;SGB=33.8752;VDB=0.573586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.2:8966111 chr02:008966111 0 W/8966111-8966111 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.938985;DP=2872;DP4=1486,1307,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42183e-06;MQSB=0.950328;RPB=0.606688;SGB=39.8925;VDB=0.958274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.2:8973800 chr02:008973800 0 W/8973800-8973800 FN2469 SNP C -> T AC=1;AN=200;BQB=0.000814403;DP=4574;DP4=2427,1754,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.9595e-07;MQSB=0.579061;RPB=0.949599;SGB=58.2954;VDB=0.888441;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G23|94|LOC_Os02g15860|protein_coding|CODING|LOC_Os02g15860.1|1|1) FN3393-S.SNP.2:8976785 chr02:008976785 0 W/8976785-8976785 FN3393-S SNP T -> C AC=1;AN=184;BQB=0.997367;DP=2627;DP4=1147,1364,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.91116e-05;MQSB=0.906845;RPB=0.765182;SGB=62.3078;VDB=0.640822;EFF=UTR_3_PRIME(MODIFIER||1369||433|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.2|7|1),UTR_3_PRIME(MODIFIER||819||394|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.3|8|1),UTR_3_PRIME(MODIFIER||2534||288|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.5|8|1),UTR_3_PRIME(MODIFIER||2534||288|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.4|6|1) FN2395.SNP.2:8979623 chr02:008979623 0 W/8979623-8979623 FN2395 SNP C -> T AC=1;AN=200;BQB=0.751097;DP=4622;DP4=2089,2249,18,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98729e-19;MQSB=0.992584;RPB=0.99487;SGB=76.378;VDB=0.693564;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C239Y|288|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C239Y|288|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.5|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C239Y|346|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C239Y|433|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C239Y|394|LOC_Os02g15870|protein_coding|CODING|LOC_Os02g15870.3|4|1) FN322-S.SNP.2:8982330 chr02:008982330 0 W/8982330-8982330 FN322-S Single Base Substitution A-G INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3325-S.SNP.2:8982997 chr02:008982997 0 W/8982997-8982997 FN3325-S SNP C -> T AC=1;AN=184;BQB=0.694901;DP=3588;DP4=1713,1762,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00947603;MQB=0.000519576;MQSB=1.60647e-08;RPB=0.589885;SGB=42.7914;VDB=0.333627;EFF=INTERGENIC(MODIFIER||||||||||1) 703-4.SNP.2:8985979 chr02:008985979 0 W/8985979-8985979 703-4 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os02g15880 CPuORF16 - conserved peptide uORF-containing transcript, expressed SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN711-S.SNP.2:8987635 chr02:008987635 0 W/8987635-8987635 FN711-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN3311-S.SNP.2:9000566 chr02:009000566 0 W/9000566-9000566 FN3311-S SNP T -> C AC=1;AN=184;BQB=0.536154;DP=2873;DP4=1116,1625,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.21581e-08;MQSB=0.411888;RPB=0.636132;SGB=33.3622;VDB=0.576104;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.2:9002613 chr02:009002613 0 W/9002613-9002613 FN360-S Single Base Substitution C-A INTERGENIC HOMO SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1548-S.SNP.2:9017589 chr02:009017589 0 W/9017589-9017589 FN1548-S SNP A -> C AC=1;AN=188;BQB=0.563077;DP=3618;DP4=1917,1662,17,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.11792e-14;MQSB=0.999994;RPB=0.780685;SGB=-75.0128;VDB=0.147455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.2:9034602 chr02:009034602 0 W/9034602-9034602 FN2351 SNP A -> T AC=1;AN=192;BQB=0.689876;DP=4169;DP4=2353,1639,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000239866;MQB=3.67579e-14;MQSB=0.864764;RPB=0.469925;SGB=71.8591;VDB=0.66736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.2:9042493 chr02:009042493 0 W/9042493-9042493 FN1466-S Single Base Substitution G-A INTRON Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2104-S.SNP.2:9047126 chr02:009047126 0 W/9047126-9047126 FN2104-S SNP G -> C AC=2;AN=168;BQB=0.329571;DP=4037;DP4=1894,2085,22,18;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=5.27066e-11;MQSB=3.76158e-05;RPB=0.627575;SGB=-139.169;VDB=0.358319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.2:9049860 chr02:009049860 0 W/9049860-9049860 FN3911-S SNP G -> A AC=1;AN=158;BQB=0.756198;DP=2310;DP4=1120,1114,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.97868e-07;MQSB=0.995585;RPB=0.687097;SGB=37.4429;VDB=0.266504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.2:9050005 chr02:009050005 0 W/9050005-9050005 FN3880-S SNP C -> T AC=2;AN=158;BQB=0.472642;DP=2180;DP4=1138,946,16,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.25305e-10;MQSB=0.921253;RPB=0.241095;SGB=95.131;VDB=0.0153079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.2:9060305 chr02:009060305 0 W/9060305-9060305 FN1142-S Single Base Substitution A-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1131-S.SNP.2:9062776 chr02:009062776 0 W/9062776-9062776 FN1131-S Single Base Substitution G-C INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN2436.SNP.2:9065705 chr02:009065705 0 W/9065705-9065705 FN2436 SNP G -> T AC=1;AN=200;BQB=0.214101;DP=5152;DP4=2468,2387,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.18567e-10;MQSB=0.98678;RPB=0.203224;SGB=-78.5159;VDB=0.70978;EFF=INTRON(MODIFIER||||696|LOC_Os02g15980|protein_coding|CODING|LOC_Os02g15980.1|1|1) FN3412-S.SNP.2:9100208 chr02:009100208 0 W/9100208-9100208 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.645216;DP=1689;DP4=619,1006,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00303872;MQSB=0.511805;RPB=0.990431;SGB=30.6558;VDB=0.961302;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.2:9105659 chr02:009105659 0 W/9105659-9105659 FN-231 Single Base Substitution A-G INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1258-S.SNP.2:9109901 chr02:009109901 0 W/9109901-9109901 FN1258-S Single Base Substitution C-A INTRON HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1345-S.SNP.2:9111796 chr02:009111796 0 W/9111796-9111796 FN1345-S Single Base Substitution T-A INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2653-S.SNP.2:9112646 chr02:009112646 0 W/9112646-9112646 FN2653-S SNP A -> G AC=1;AN=200;BQB=0.996;DP=5360;DP4=2582,2549,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26051e-12;MQSB=0.877814;RPB=0.997186;SGB=45.1159;VDB=0.80046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.2:9123788 chr02:009123788 0 W/9123788-9123788 FN2137-S SNP T -> G AC=1;AN=168;BQB=0.868505;DP=3002;DP4=1601,1368,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.00566289;MQB=0.928325;MQSB=0;RPB=0.684759;SGB=9.91396;VDB=0.0215714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Gca|S208A|1582|LOC_Os02g16050|protein_coding|CODING|LOC_Os02g16050.1|3|1) FN872-S.SNP.2:9137857 chr02:009137857 0 W/9137857-9137857 FN872-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3484-S.SNP.2:9138629 chr02:009138629 0 W/9138629-9138629 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.991686;DP=2662;DP4=1314,1241,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.89001e-08;MQSB=0.997673;RPB=0.554678;SGB=32.2261;VDB=0.530074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M628V|843|LOC_Os02g16060|protein_coding|CODING|LOC_Os02g16060.1|1|1) FN3484-S.SNP.2:9138631 chr02:009138631 0 W/9138631-9138631 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.988253;DP=2654;DP4=1331,1258,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.97544e-08;MQSB=0.999558;RPB=0.54539;SGB=32.2261;VDB=0.409934;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M628I|843|LOC_Os02g16060|protein_coding|CODING|LOC_Os02g16060.1|1|1) FN3564-S.SNP.2:9142204 chr02:009142204 0 W/9142204-9142204 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.965476;DP=3036;DP4=1625,1304,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.758e-12;MQSB=0.52044;RPB=0.98259;SGB=76.2387;VDB=0.281016;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.2:9142206 chr02:009142206 0 W/9142206-9142206 FN3564-S SNP T -> A AC=1;AN=188;BQB=0.991014;DP=3057;DP4=1619,1337,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.33996e-12;MQSB=0.625481;RPB=0.937441;SGB=76.2387;VDB=0.297533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.2:9142208 chr02:009142208 0 W/9142208-9142208 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.993432;DP=3047;DP4=1605,1337,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.52133e-12;MQSB=0.555111;RPB=0.609436;SGB=53.7007;VDB=0.372323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.2:9144896 chr02:009144896 0 W/9144896-9144896 FN1708-S SNP G -> T AC=1;AN=188;BQB=0.988921;DP=3111;DP4=1492,1584,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6115e-05;MQSB=0.893885;RPB=0.987154;SGB=0.908326;VDB=0.686723;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.2:9146954 chr02:009146954 0 W/9146954-9146954 FN4038-S SNP G -> A AC=1;AN=168;BQB=0.513244;DP=2266;DP4=1105,1061,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.41563e-06;MQSB=0.600864;RPB=0.895232;SGB=56.6036;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.2:9152060 chr02:009152060 0 W/9152060-9152060 FN-410 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g16080 retrotransposon protein, putative, unclassified, expressed SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN666-S.SNP.2:9158504 chr02:009158504 0 W/9158504-9158504 FN666-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g16090 retrotransposon protein, putative, LINE subclass, expressed SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN1711-S.SNP.2:9164128 chr02:009164128 0 W/9164128-9164128 FN1711-S SNP G -> A AC=2;AN=188;BQB=0.0522512;DP=4092;DP4=2283,1761,21,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.51005e-16;MQSB=0.994883;RPB=0.961079;SGB=-88.1232;VDB=0.306518;EFF=INTRON(MODIFIER||||493|LOC_Os02g16110|protein_coding|CODING|LOC_Os02g16110.1|1|1) FN1113-S.SNP.2:9168336 chr02:009168336 0 W/9168336-9168336 FN1113-S Single Base Substitution A-C INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3675-S.SNP.2:9188620 chr02:009188620 0 W/9188620-9188620 FN3675-S SNP C -> A AC=2;AN=190;BQB=0.963334;DP=2766;DP4=1318,1317,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.58791e-15;MQSB=0.676667;RPB=0.941966;SGB=126.511;VDB=0.430908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V51L|357|LOC_Os02g16150|protein_coding|CODING|LOC_Os02g16150.1|1|1) FN1698-S.SNP.2:9188733 chr02:009188733 0 W/9188733-9188733 FN1698-S SNP C -> T AC=2;AN=188;BQB=0.51662;DP=2513;DP4=1252,1211,19,7;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00437724;MQB=0.508086;MQSB=0.149649;RPB=0.967708;SGB=-40.1048;VDB=0.289204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G13E|357|LOC_Os02g16150|protein_coding|CODING|LOC_Os02g16150.1|1|1) FN1718-S.SNP.2:9190752 chr02:009190752 0 W/9190752-9190752 FN1718-S SNP T -> C AC=1;AN=188;BQB=0.221759;DP=3385;DP4=1720,1603,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00354505;MQB=0.0273831;MQSB=7.89713e-05;RPB=0.810049;SGB=-103.637;VDB=0.664492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.2:9191909 chr02:009191909 0 W/9191909-9191909 FN3769-S SNP G -> A AC=1;AN=190;BQB=0.747941;DP=1831;DP4=670,1098,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00392526;MQSB=0.0158418;RPB=0.751873;SGB=30.8803;VDB=0.698141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G22D|144|LOC_Os02g16160|protein_coding|CODING|LOC_Os02g16160.1|1|1) FN2467.SNP.2:9192628 chr02:009192628 0 W/9192628-9192628 FN2467 SNP C -> G AC=1;AN=200;BQB=0.999812;DP=4060;DP4=2322,1384,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000246305;MQB=2.84614e-05;MQSB=0.73385;RPB=0.249631;SGB=49.6594;VDB=0.211747;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.2:9198593 chr02:009198593 0 W/9198593-9198593 FN3782-S SNP A -> G AC=1;AN=190;BQB=0.812257;DP=2844;DP4=1315,1455,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.38045;MQB=0.999914;MQSB=0;RPB=0.0715229;SGB=46.7622;VDB=0.287158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.2:9199307 chr02:009199307 0 W/9199307-9199307 FN3806-S SNP G -> A AC=2;AN=190;BQB=0.985779;DP=2808;DP4=1464,1244,8,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00961538;MQB=2.10163e-09;MQSB=0.993337;RPB=0.977335;SGB=60.9777;VDB=0.482009;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R167H|263|LOC_Os02g16180|protein_coding|CODING|LOC_Os02g16180.1|1|1) FN3508-S.SNP.2:9200857 chr02:009200857 0 W/9200857-9200857 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.969974;DP=2957;DP4=1476,1423,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0399053;MQB=0.040776;MQSB=9.09099e-05;RPB=0.910432;SGB=35.3493;VDB=0.185364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R330H|1470|LOC_Os02g16190|protein_coding|CODING|LOC_Os02g16190.1|1|1) FN2463.SNP.2:9201675 chr02:009201675 0 W/9201675-9201675 FN2463 SNP C -> A AC=2;AN=200;BQB=0.701852;DP=5083;DP4=2642,2141,18,23;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0320677;MQB=5.81314e-05;MQSB=6.49424e-17;RPB=0.595585;SGB=183.209;VDB=0.00238787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L603I|1470|LOC_Os02g16190|protein_coding|CODING|LOC_Os02g16190.1|1|1) FN4130-S.SNP.2:9201860 chr02:009201860 0 W/9201860-9201860 FN4130-S SNP T -> C AC=1;AN=182;BQB=0.95976;DP=3242;DP4=1534,1650,2,12;HOB=6.03792e-05;ICB=0.000121422;MQ=35;MQ0F=0.0638495;MQB=0.950054;MQSB=0.327371;RPB=0.708982;SGB=57.644;VDB=0.654031;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A664|1470|LOC_Os02g16190|protein_coding|CODING|LOC_Os02g16190.1|1|1) FN875-S.SNP.2:9203394 chr02:009203394 0 W/9203394-9203394 FN875-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g16190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN432-S.SNP.2:9204378 chr02:009204378 0 W/9204378-9204378 FN432-S Single Base Substitution C-T INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2328.SNP.2:9204593 chr02:009204593 0 W/9204593-9204593 FN2328 SNP C -> T AC=1;AN=192;BQB=0.819443;DP=5772;DP4=2763,2499,18,12;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.185897;MQB=0.26553;MQSB=0.868962;RPB=0.877657;SGB=27.6913;VDB=0.753243;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.2:9204664 chr02:009204664 0 W/9204664-9204664 FN781-S Single Base Substitution C-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN4158-S.SNP.2:9208446 chr02:009208446 0 W/9208446-9208446 FN4158-S SNP G -> T AC=2;AN=170;BQB=0.758786;DP=2383;DP4=1260,1059,10,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.95868e-08;MQSB=0.266452;RPB=0.708335;SGB=83.4133;VDB=0.721744;EFF=INTRON(MODIFIER||||521|LOC_Os02g16200|protein_coding|CODING|LOC_Os02g16200.1|2|1) FN3375-S.SNP.2:9210795 chr02:009210795 0 W/9210795-9210795 FN3375-S SNP C -> G AC=1;AN=184;BQB=0.793879;DP=3716;DP4=1731,1822,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.223897;MQB=0.454447;MQSB=6.46257e-10;RPB=0.997042;SGB=20.7533;VDB=0.212824;EFF=INTRON(MODIFIER||||410|LOC_Os02g16210|protein_coding|CODING|LOC_Os02g16210.1|1|1) FN1690-S.SNP.2:9213368 chr02:009213368 0 W/9213368-9213368 FN1690-S SNP C -> T AC=1;AN=188;BQB=0.991841;DP=3914;DP4=1757,2123,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=6.71533e-05;MQSB=0.138026;RPB=0.999743;SGB=50.1574;VDB=0.120459;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R143C|410|LOC_Os02g16210|protein_coding|CODING|LOC_Os02g16210.1|3|1) FN4272-S.SNP.2:9214048 chr02:009214048 0 W/9214048-9214048 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.999947;DP=2351;DP4=1017,1278,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.94795e-12;MQSB=0.869493;RPB=0.619754;SGB=87.856;VDB=0.288873;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L244|410|LOC_Os02g16210|protein_coding|CODING|LOC_Os02g16210.1|4|1) FN2375.SNP.2:9225371 chr02:009225371 0 W/9225371-9225371 FN2375 SNP C -> A AC=1;AN=192;BQB=0.686782;DP=10716;DP4=5212,4612,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00578574;MQB=0.106514;MQSB=1.01527e-08;RPB=0.403878;SGB=-71.6791;VDB=0.33256;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.2:9227930 chr02:009227930 0 W/9227930-9227930 FN-223 Single Base Substitution G-A INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2242-S.SNP.2:9229310 chr02:009229310 0 W/9229310-9229310 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.988144;DP=4792;DP4=2089,2311,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99817e-10;MQSB=0.727711;RPB=0.943975;SGB=71.8647;VDB=0.688126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.2:9229310 chr02:009229310 0 W/9229310-9229310 FN3530-S SNP C -> T AC=2;AN=188;BQB=0.962621;DP=3147;DP4=1302,1715,18,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.09137e-22;MQSB=0.878373;RPB=0.901043;SGB=180.734;VDB=0.339461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.2:9241354 chr02:009241354 0 W/9241354-9241354 FN-140 Single Base Substitution T-A INTRON HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN320-S.SNP.2:9246775 chr02:009246775 0 W/9246775-9246775 FN320-S Single Base Substitution C-T INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN927-S.SNP.2:9256331 chr02:009256331 0 W/9256331-9256331 FN927-S Single Base Substitution T-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN927-S.SNP.2:9256332 chr02:009256332 0 W/9256332-9256332 FN927-S Single Base Substitution T-G INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. 704-2.SNP.2:9257430 chr02:009257430 0 W/9257430-9257430 704-2 Single Base Substitution C-T INTERGENIC Homo SNo: 1456, Mutant_ID: 704-2, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. FN-217.SNP.2:9259647 chr02:009259647 0 W/9259647-9259647 FN-217 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN455-S.SNP.2:9259915 chr02:009259915 0 W/9259915-9259915 FN455-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g16270 xa1, putative, expressed SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1443-S.SNP.2:9261449 chr02:009261449 0 W/9261449-9261449 FN1443-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g16270 xa1, putative, expressed SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2480.SNP.2:9267320 chr02:009267320 0 W/9267320-9267320 FN2480 SNP G -> A AC=1;AN=200;BQB=0.878703;DP=5333;DP4=2134,2801,21,19;HOB=5e-05;ICB=0.0001005;MQ=11;MQ0F=0.470654;MQB=0.0963504;MQSB=0;RPB=0.514893;SGB=-222.797;VDB=0.762267;EFF=INTRON(MODIFIER||||490|LOC_Os02g16280|protein_coding|CODING|LOC_Os02g16280.1|5|1) FN781-S.SNP.2:9267825 chr02:009267825 0 W/9267825-9267825 FN781-S Single Base Substitution G-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN3517-S.SNP.2:9268953 chr02:009268953 0 W/9268953-9268953 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.504095;DP=4394;DP4=2048,2263,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.56092e-10;MQSB=0.818397;RPB=0.994475;SGB=31.1628;VDB=0.785005;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q66*|481|LOC_Os02g16290|protein_coding|CODING|LOC_Os02g16290.1|1|1);LOF=(LOC_Os02g16290|LOC_Os02g16290|1|1.00);NMD=(LOC_Os02g16290|LOC_Os02g16290|1|1.00) FN2262-S.SNP.2:9271024 chr02:009271024 0 W/9271024-9271024 FN2262-S SNP G -> C AC=1;AN=190;BQB=0.853821;DP=4825;DP4=1981,2483,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59644e-16;MQSB=0.987558;RPB=0.964857;SGB=92.9626;VDB=0.162844;EFF=INTRON(MODIFIER||||481|LOC_Os02g16290|protein_coding|CODING|LOC_Os02g16290.1|2|1) FN-168.SNP.2:9276413 chr02:009276413 0 W/9276413-9276413 FN-168 Single Base Substitution G-A INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN3574-S.SNP.2:9280015 chr02:009280015 0 W/9280015-9280015 FN3574-S SNP A -> G AC=2;AN=188;BQB=0.94858;DP=3433;DP4=1723,1563,24,16;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.0119429;MQB=2.51033e-14;MQSB=3.41043e-07;RPB=0.126926;SGB=131.653;VDB=0.382516;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.2:9280587 chr02:009280587 0 W/9280587-9280587 FN695-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g16320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1499-S.SNP.2:9281921 chr02:009281921 0 W/9281921-9281921 FN1499-S Single Base Substitution G-A INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1015-S.SNP.2:9288731 chr02:009288731 0 W/9288731-9288731 FN1015-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g16330 xa1, putative, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3723-S.SNP.2:9315468 chr02:009315468 0 W/9315468-9315468 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.945539;DP=2034;DP4=1922,46,11,0;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.127335;MQB=0.941885;MQSB=1.11679e-23;RPB=0.689098;SGB=44.5415;VDB=0.352739;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V178|852|LOC_Os02g16360|protein_coding|CODING|LOC_Os02g16360.1|2|1) FN618-S.SNP.2:9319004 chr02:009319004 0 W/9319004-9319004 FN618-S Single Base Substitution C-A INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3893-S.SNP.2:9322527 chr02:009322527 0 W/9322527-9322527 FN3893-S SNP G -> T AC=1;AN=158;BQB=0.867614;DP=2463;DP4=986,1385,17,9;HOB=8.01154e-05;ICB=0.000161245;MQ=17;MQ0F=0.410881;MQB=0.00353768;MQSB=0;RPB=0.420573;SGB=108.239;VDB=0.622441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.2:9328863 chr02:009328863 0 W/9328863-9328863 FN2399 SNP G -> T AC=1;AN=200;BQB=0.992056;DP=4590;DP4=2177,2148,15,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0191721;MQB=0.000729742;MQSB=5.3215e-28;RPB=0.967081;SGB=-7.6637;VDB=0.823189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.2:9330647 chr02:009330647 0 W/9330647-9330647 FN3695-S SNP G -> T AC=1;AN=190;BQB=0.84402;DP=2082;DP4=979,1021,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00864553;MQB=0.0752594;MQSB=2.23984e-06;RPB=0.520902;SGB=44.5415;VDB=0.990256;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.2:9333481 chr02:009333481 0 W/9333481-9333481 FN788-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g16380 retrotransposon protein, putative, unclassified SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN509-S.SNP.2:9335635 chr02:009335635 0 W/9335635-9335635 FN509-S Single Base Substitution G-C INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3509-S.SNP.2:9342947 chr02:009342947 0 W/9342947-9342947 FN3509-S SNP A -> G AC=1;AN=188;BQB=0.8777;DP=3062;DP4=1675,1263,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.108752;MQB=0.275429;MQSB=8.64285e-05;RPB=0.975451;SGB=-0.634963;VDB=0.836021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.2:9343768 chr02:009343768 0 W/9343768-9343768 FN1356-S Single Base Substitution A-G INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1540-S.SNP.2:9346930 chr02:009346930 0 W/9346930-9346930 FN1540-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1638-S.SNP.2:9349022 chr02:009349022 0 W/9349022-9349022 FN1638-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2706-S.SNP.2:9349472 chr02:009349472 0 W/9349472-9349472 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.399896;DP=9755;DP4=4361,4871,12,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.17617e-12;MQSB=0.661247;RPB=0.903484;SGB=-8.26887;VDB=0.387983;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L590|1867|LOC_Os02g16400|protein_coding|CODING|LOC_Os02g16400.1|5|1) FN4087-S.SNP.2:9350678 chr02:009350678 0 W/9350678-9350678 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.523288;DP=6127;DP4=2754,3240,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.39051e-05;MQSB=0.125994;RPB=0.247301;SGB=57.644;VDB=0.375797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V284M|1867|LOC_Os02g16400|protein_coding|CODING|LOC_Os02g16400.1|2|1) FN3436-S.SNP.2:9351480 chr02:009351480 0 W/9351480-9351480 FN3436-S SNP C -> G AC=1;AN=184;BQB=0.977854;DP=5025;DP4=2654,2172,6,17;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.162786;MQB=0.152025;MQSB=0;RPB=0.899575;SGB=70.9657;VDB=0.821282;EFF=INTRON(MODIFIER||||1867|LOC_Os02g16400|protein_coding|CODING|LOC_Os02g16400.1|1|1) FN3451-S.SNP.2:9351590 chr02:009351590 0 W/9351590-9351590 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.71702;DP=4909;DP4=1886,2861,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.11265;MQB=0.0502517;MQSB=0.0498077;RPB=0.850496;SGB=70.9657;VDB=0.725993;EFF=INTRON(MODIFIER||||1867|LOC_Os02g16400|protein_coding|CODING|LOC_Os02g16400.1|1|1) FN1195-S.SNP.2:9357543 chr02:009357543 0 W/9357543-9357543 FN1195-S Single Base Substitution C-A INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3662-S.SNP.2:9357543 chr02:009357543 0 W/9357543-9357543 FN3662-S SNP C -> A AC=2;AN=190;BQB=0.987557;DP=2543;DP4=1087,1335,18,11;HOB=0.020831;ICB=0.494793;MQ=19;MQ0F=0.462053;MQB=0.198663;MQSB=0;RPB=0.817361;SGB=126.511;VDB=0.152535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.2:9361043 chr02:009361043 0 W/9361043-9361043 FN1436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g16420 retrotransposon protein, putative, unclassified, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1112-S.SNP.2:9373243 chr02:009373243 0 W/9373243-9373243 FN1112-S Single Base Substitution T-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3494-S.SNP.2:9382169 chr02:009382169 0 W/9382169-9382169 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.300387;DP=2232;DP4=1329,705,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00149413;MQSB=0.00537218;RPB=0.825777;SGB=25.1826;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.2:9382348 chr02:009382348 0 W/9382348-9382348 FN3725-S SNP T -> A AC=1;AN=190;BQB=0.998626;DP=1269;DP4=910,244,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000788022;MQB=4.0164e-05;MQSB=0.913727;RPB=0.711953;SGB=25.439;VDB=0.343674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.2:9382783 chr02:009382783 0 W/9382783-9382783 FN2564-S SNP G -> C AC=1;AN=198;BQB=0.70366;DP=3584;DP4=1547,1810,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82446e-06;MQSB=0.423607;RPB=0.995235;SGB=25.7687;VDB=0.560194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.2:9382783 chr02:009382783 0 W/9382783-9382783 FN4202-S SNP G -> C AC=2;AN=170;BQB=0.998767;DP=2327;DP4=1117,1114,18,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.72876e-17;MQSB=0.672897;RPB=0.0924538;SGB=145.61;VDB=0.467797;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.2:9385486 chr02:009385486 0 W/9385486-9385486 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.925033;DP=2440;DP4=1336,1070,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.0261103;MQSB=0.618346;RPB=0.835851;SGB=0.908326;VDB=0.547437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:9388938 chr02:009388938 0 W/9388938-9388938 FN2583-S SNP G -> A AC=2;AN=200;BQB=0.445031;DP=4427;DP4=2078,2007,38,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.87961e-29;MQSB=0.99726;RPB=0.543635;SGB=68.8812;VDB=0.791284;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.2:9390836 chr02:009390836 0 W/9390836-9390836 FN754-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3770-S.SNP.2:9393481 chr02:009393481 0 W/9393481-9393481 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.927287;DP=2858;DP4=1517,1237,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.01452e-08;MQSB=0.67635;RPB=0.698955;SGB=39.6545;VDB=0.366444;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G61R|283|LOC_Os02g16450|protein_coding|CODING|LOC_Os02g16450.1|1|1) FN416-S.SNP.2:9394913 chr02:009394913 0 W/9394913-9394913 FN416-S Single Base Substitution T-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3528-S.SNP.2:9396043 chr02:009396043 0 W/9396043-9396043 FN3528-S SNP T -> C AC=1;AN=188;BQB=0.607885;DP=5879;DP4=2069,3581,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.249532;MQB=0.00467834;MQSB=9.72391e-05;RPB=0.0743095;SGB=54.0524;VDB=0.318145;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.2:9398748 chr02:009398748 0 W/9398748-9398748 FN1195-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1219-S.SNP.2:9409245 chr02:009409245 0 W/9409245-9409245 FN1219-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN414-S.SNP.2:9425374 chr02:009425374 0 W/9425374-9425374 FN414-S Single Base Substitution T-C INTERGENIC HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN4155-S.SNP.2:9429113 chr02:009429113 0 W/9429113-9429113 FN4155-S SNP T -> A AC=1;AN=170;BQB=0.720879;DP=2832;DP4=1313,1429,17,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.29495e-14;MQSB=0.738298;RPB=0.844418;SGB=123.397;VDB=0.546378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.2:9432034 chr02:009432034 0 W/9432034-9432034 FN2214-S SNP G -> A AC=2;AN=190;BQB=0.999975;DP=5265;DP4=2337,2608,26,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.49159e-32;MQSB=0.584321;RPB=0.495825;SGB=199.579;VDB=0.374526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.2:9432096 chr02:009432096 0 W/9432096-9432096 FN2423 SNP G -> A AC=1;AN=200;BQB=0.923695;DP=5075;DP4=2243,2449,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.35235e-17;MQSB=0.979688;RPB=0.999928;SGB=55.5366;VDB=0.904321;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.2:9442653 chr02:009442653 0 W/9442653-9442653 FN-103 Single Base Substitution C-T INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2442.SNP.2:9443148 chr02:009443148 0 W/9443148-9443148 FN2442 SNP A -> G AC=1;AN=200;BQB=0.999825;DP=4426;DP4=2488,1728,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41493e-07;MQSB=0.989626;RPB=0.953049;SGB=16.4591;VDB=0.574021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.2:9445227 chr02:009445227 0 W/9445227-9445227 FN3879-S SNP A -> C AC=2;AN=158;BQB=0.551956;DP=2749;DP4=1415,1188,26,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.17142e-24;MQSB=0.996104;RPB=0.979539;SGB=182.275;VDB=0.485929;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.2:9446747 chr02:009446747 0 W/9446747-9446747 FN522-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN857-S.SNP.2:9446898 chr02:009446898 0 W/9446898-9446898 FN857-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN1241-S.SNP.2:9453292 chr02:009453292 0 W/9453292-9453292 FN1241-S Single Base Substitution T-A INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1241-S.SNP.2:9453293 chr02:009453293 0 W/9453293-9453293 FN1241-S Single Base Substitution T-A INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1536-S.SNP.2:9453377 chr02:009453377 0 W/9453377-9453377 FN1536-S Single Base Substitution C-T INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-109.SNP.2:9457488 chr02:009457488 0 W/9457488-9457488 FN-109 Single Base Substitution T-A INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN981-S.SNP.2:9457764 chr02:009457764 0 W/9457764-9457764 FN981-S Single Base Substitution G-T INTERGENIC HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2438.SNP.2:9458070 chr02:009458070 0 W/9458070-9458070 FN2438 SNP G -> A AC=1;AN=200;BQB=0.486383;DP=4171;DP4=1920,1849,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43491e-08;MQSB=0.376805;RPB=0.364561;SGB=26.8797;VDB=0.932526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.2:9464848 chr02:009464848 0 W/9464848-9464848 FN2140-S SNP T -> C AC=1;AN=168;BQB=0.305505;DP=3848;DP4=1754,2014,11,22;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.2902e-18;MQSB=0.0852351;RPB=0.957718;SGB=-8.91027;VDB=0.132051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.2:9464849 chr02:009464849 0 W/9464849-9464849 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.0398221;DP=3849;DP4=1747,2005,12,22;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.1755e-16;MQSB=0.0922782;RPB=0.704926;SGB=-8.47945;VDB=0.190482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.2:9473480 chr02:009473480 0 W/9473480-9473480 FN1011-S Single Base Substitution A-T INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN_N1-26-1.SNP.2:9476256 chr02:009476256 0 W/9476256-9476256 FN_N1-26-1 Single Base Substitution A-G Homo LOC_Os02g16580 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN3416-S.SNP.2:9476487 chr02:009476487 0 W/9476487-9476487 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.895721;DP=2753;DP4=1284,1414,3,3;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0261533;MQB=0.577103;MQSB=0.00146112;RPB=0.610578;SGB=21.6146;VDB=0.810983;EFF=INTRON(MODIFIER||||775|LOC_Os02g16580|protein_coding|CODING|LOC_Os02g16580.1|3|1) FN-409.SNP.2:9492216 chr02:009492216 0 W/9492216-9492216 FN-409 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g16600 expressed protein SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-409.SNP.2:9492218 chr02:009492218 0 W/9492218-9492218 FN-409 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. W426-1-1.SNP.2:9500414 chr02:009500414 0 W/9500414-9500414 W426-1-1 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1322-S.SNP.2:9502480 chr02:009502480 0 W/9502480-9502480 FN1322-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN2707-S.SNP.2:9506154 chr02:009506154 0 W/9506154-9506154 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.724692;DP=5223;DP4=2646,2390,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.64456e-09;MQSB=0.993487;RPB=0.973539;SGB=47.4799;VDB=0.274938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.2:9510648 chr02:009510648 0 W/9510648-9510648 FN3810-S SNP C -> T AC=2;AN=190;BQB=0.860406;DP=2871;DP4=1544,1221,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.66226e-10;MQSB=0.982336;RPB=0.858959;SGB=68.0854;VDB=0.0963925;EFF=INTRON(MODIFIER||||632|LOC_Os02g16650|protein_coding|CODING|LOC_Os02g16650.1|1|1) FN4142-S.SNP.2:9522941 chr02:009522941 0 W/9522941-9522941 FN4142-S SNP C -> T AC=1;AN=170;BQB=0.817701;DP=2738;DP4=1276,1389,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.39952e-10;MQSB=0.890257;RPB=0.973741;SGB=55.5339;VDB=0.98142;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.2:9529558 chr02:009529558 0 W/9529558-9529558 FN-184 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1422-S.SNP.2:9540044 chr02:009540044 0 W/9540044-9540044 FN1422-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g16690 expressed protein SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1461-S.SNP.2:9544678 chr02:009544678 0 W/9544678-9544678 FN1461-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN4051-S.SNP.2:9545138 chr02:009545138 0 W/9545138-9545138 FN4051-S SNP A -> G AC=2;AN=168;BQB=0.647764;DP=2363;DP4=1245,988,24,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.029e-16;MQSB=0.999736;RPB=0.949885;SGB=117.088;VDB=0.454196;EFF=INTRON(MODIFIER||||298|LOC_Os02g16709|protein_coding|CODING|LOC_Os02g16709.1|1|1) FN2656-S.SNP.2:9553036 chr02:009553036 0 W/9553036-9553036 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.693035;DP=4340;DP4=2024,2062,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52131e-15;MQSB=0.879424;RPB=0.997357;SGB=114.132;VDB=0.368134;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q215|262|LOC_Os02g16730|protein_coding|CODING|LOC_Os02g16730.1|2|1) FN-300.SNP.2:9555235 chr02:009555235 0 W/9555235-9555235 FN-300 Single Base Substitution A-C INTERGENIC HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN_N1-213-1.SNP.2:9562163 chr02:009562163 0 W/9562163-9562163 FN_N1-213-1 Single Base Substitution C-T Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3887-S.SNP.2:9562351 chr02:009562351 0 W/9562351-9562351 FN3887-S SNP C -> T AC=1;AN=158;BQB=0.866903;DP=2679;DP4=1097,1445,13,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.04606e-13;MQSB=0.60264;RPB=0.930905;SGB=103.87;VDB=0.207888;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.2:9562838 chr02:009562838 0 W/9562838-9562838 FN3311-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1452-S.SNP.2:9563474 chr02:009563474 0 W/9563474-9563474 FN1452-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN751-S.SNP.2:9573138 chr02:009573138 0 W/9573138-9573138 FN751-S Single Base Substitution A-G INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2184-S.SNP.2:9575440 chr02:009575440 0 W/9575440-9575440 FN2184-S SNP A -> C AC=1;AN=190;BQB=0.297028;DP=4633;DP4=1864,2399,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19936e-08;MQSB=0.734496;RPB=0.984148;SGB=53.6492;VDB=0.665058;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggC|G264|278|LOC_Os02g16800|protein_coding|CODING|LOC_Os02g16800.1|2|1) FN2362.SNP.2:9575885 chr02:009575885 0 W/9575885-9575885 FN2362 SNP A -> G AC=2;AN=192;BQB=0.490564;DP=4416;DP4=2014,1963,8,15;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.000452899;MQB=1.4841e-05;MQSB=1.96349e-08;RPB=0.989249;SGB=71.8591;VDB=0.748173;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.2:9576488 chr02:009576488 0 W/9576488-9576488 FN581-S Single Base Substitution A-C INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN581-S.SNP.2:9576493 chr02:009576493 0 W/9576493-9576493 FN581-S Single Base Substitution A-G INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-263.SNP.2:9576755 chr02:009576755 0 W/9576755-9576755 FN-263 Single Base Substitution A-C INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN1280-S.SNP.2:9590433 chr02:009590433 0 W/9590433-9590433 FN1280-S Single Base Substitution A-G INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2192-S.SNP.2:9591495 chr02:009591495 0 W/9591495-9591495 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.406728;DP=5187;DP4=2552,2254,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.4e-10;MQSB=0.56971;RPB=0.876205;SGB=41.5369;VDB=0.518682;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.2:9596245 chr02:009596245 0 W/9596245-9596245 FN3494-S SNP G -> C AC=1;AN=184;BQB=0.968358;DP=2936;DP4=1030,1632,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.48035e-08;MQSB=0.783316;RPB=0.148167;SGB=23.2751;VDB=0.323267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.2:9597057 chr02:009597057 0 W/9597057-9597057 FN-104 Single Base Substitution C-T INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN494-S.SNP.2:9597062 chr02:009597062 0 W/9597062-9597062 FN494-S Single Base Substitution C-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-400.SNP.2:9606960 chr02:009606960 0 W/9606960-9606960 FN-400 Single Base Substitution G-A INTRON HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2701-S.SNP.2:9609019 chr02:009609019 0 W/9609019-9609019 FN2701-S SNP A -> C AC=2;AN=200;BQB=0.766697;DP=4223;DP4=1972,1763,30,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00142079;MQB=4.43463e-15;MQSB=4.62654e-07;RPB=0.988515;SGB=169.394;VDB=0.834288;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.2:9615983 chr02:009615983 0 W/9615983-9615983 W416-6-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2307.SNP.2:9616135 chr02:009616135 0 W/9616135-9616135 FN2307 SNP A -> C AC=1;AN=192;BQB=0.176549;DP=4983;DP4=2574,2220,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.36258e-10;MQSB=0.288561;RPB=0.950883;SGB=46.9087;VDB=0.706638;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.2:9637283 chr02:009637283 0 W/9637283-9637283 FN-169 Single Base Substitution T-G INTERGENIC HOMO SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2705-S.SNP.2:9640219 chr02:009640219 0 W/9640219-9640219 FN2705-S SNP C -> T AC=1;AN=200;BQB=0.796955;DP=4927;DP4=2641,1985,18,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.85363e-16;MQSB=0.987134;RPB=0.929231;SGB=83.5316;VDB=0.125863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.2:9640220 chr02:009640220 0 W/9640220-9640220 FN2705-S SNP C -> T AC=1;AN=200;BQB=0.707205;DP=4942;DP4=2677,1989,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.73733e-16;MQSB=0.999702;RPB=0.996937;SGB=83.5316;VDB=0.181098;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.2:9645026 chr02:009645026 0 W/9645026-9645026 FN779-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g16920 retrotransposon protein, putative, unclassified SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3903-S.SNP.2:9647817 chr02:009647817 0 W/9647817-9647817 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.968461;DP=2862;DP4=1644,1163,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1439e-06;MQSB=0.50062;RPB=0.693533;SGB=38.3284;VDB=0.376037;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.2:9652991 chr02:009652991 0 W/9652991-9652991 FN1476-S Single Base Substitution C-T INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-388.SNP.2:9654822 chr02:009654822 0 W/9654822-9654822 FN-388 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g16940 OsSub13 - Putative Subtilisin homologue, expressed SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN3596-S.SNP.2:9665048 chr02:009665048 0 W/9665048-9665048 FN3596-S SNP G -> A AC=2;AN=188;BQB=0.866884;DP=2529;DP4=899,1564,7,22;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0862001;MQB=0.280808;MQSB=0;RPB=0.557845;SGB=126.215;VDB=0.599837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A676T|1755|LOC_Os02g16950|protein_coding|CODING|LOC_Os02g16950.1|2|1) FN-78.SNP.2:9672633 chr02:009672633 0 W/9672633-9672633 FN-78 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g16960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3480-S.SNP.2:9673188 chr02:009673188 0 W/9673188-9673188 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.932554;DP=2903;DP4=1368,1460,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.81119e-10;MQSB=0.991446;RPB=0.330546;SGB=66.8296;VDB=0.723549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D849N|1321|LOC_Os02g16960|protein_coding|CODING|LOC_Os02g16960.1|1|1) FN4121-S.SNP.2:9673536 chr02:009673536 0 W/9673536-9673536 FN4121-S SNP A -> T AC=2;AN=182;BQB=0.968613;DP=2943;DP4=1472,1377,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00135916;MQB=7.79007e-14;MQSB=0.57508;RPB=0.82659;SGB=74.2472;VDB=0.969815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W733R|1321|LOC_Os02g16960|protein_coding|CODING|LOC_Os02g16960.1|1|1) FN565-S.SNP.2:9679755 chr02:009679755 0 W/9679755-9679755 FN565-S Single Base Substitution T-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN1068-S.SNP.2:9680912 chr02:009680912 0 W/9680912-9680912 FN1068-S Single Base Substitution G-T INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2608-S.SNP.2:9684690 chr02:009684690 0 W/9684690-9684690 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.977338;DP=4120;DP4=1936,1943,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.0038835;MQB=0.0162623;MQSB=0.0531134;RPB=0.937044;SGB=14.9842;VDB=0.553951;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A417T|953|LOC_Os02g16970|protein_coding|CODING|LOC_Os02g16970.1|2|1) FN-356.SNP.2:9689239 chr02:009689239 0 W/9689239-9689239 FN-356 Single Base Substitution G-A INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN4011-S.SNP.2:9689665 chr02:009689665 0 W/9689665-9689665 FN4011-S SNP T -> A AC=2;AN=168;BQB=0.884939;DP=1839;DP4=893,823,11,11;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0184883;MQB=0.000662183;MQSB=4.09858e-06;RPB=0.999885;SGB=39.2004;VDB=0.606901;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.2:9691075 chr02:009691075 0 W/9691075-9691075 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.988095;DP=2369;DP4=1069,1228,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.00253271;MQB=0.0827455;MQSB=0.187387;RPB=0.823176;SGB=14.9986;VDB=0.0527302;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.2:9701172 chr02:009701172 0 W/9701172-9701172 FN4080-S SNP G -> C AC=1;AN=182;BQB=0.871837;DP=3440;DP4=1783,1578,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.13726e-09;MQSB=0.964447;RPB=0.491795;SGB=30.6767;VDB=0.417075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N412K|874|LOC_Os02g16990|protein_coding|CODING|LOC_Os02g16990.1|7|1) FN3928-S.SNP.2:9705976 chr02:009705976 0 W/9705976-9705976 FN3928-S SNP C -> T AC=1;AN=158;BQB=0.654314;DP=2249;DP4=951,1216,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000777909;MQSB=0.939186;RPB=0.993214;SGB=33.9591;VDB=0.0430443;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.2:9706054 chr02:009706054 0 W/9706054-9706054 FN-308 Single Base Substitution T-A INTERGENIC HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2740-S.SNP.2:9715903 chr02:009715903 0 W/9715903-9715903 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.899019;DP=4899;DP4=2260,2389,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56637e-08;MQSB=0.0105709;RPB=0.72426;SGB=58.2954;VDB=0.733158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P6L|496|LOC_Os02g17000|protein_coding|CODING|LOC_Os02g17000.1|1|1) FN1568-S.SNP.2:9716265 chr02:009716265 0 W/9716265-9716265 FN1568-S Single Base Substitution G-T INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2663-S.SNP.2:9767386 chr02:009767386 0 W/9767386-9767386 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.993441;DP=5186;DP4=2201,2606,13,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0723101;MQB=7.31559e-07;MQSB=3.3594e-12;RPB=0.300346;SGB=94.3471;VDB=0.56868;EFF=INTRON(MODIFIER||||606|LOC_Os02g17080|protein_coding|CODING|LOC_Os02g17080.1|3|1) FN3381-S.SNP.2:9770736 chr02:009770736 0 W/9770736-9770736 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.730441;DP=2662;DP4=1199,1264,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26675e-07;MQSB=0.843601;RPB=0.971297;SGB=2.23696;VDB=0.783709;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.2:9782255 chr02:009782255 0 W/9782255-9782255 FN4063-S SNP A -> G AC=1;AN=168;BQB=0.998597;DP=2172;DP4=1083,1019,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.72113e-08;MQSB=0.947559;RPB=0.995522;SGB=41.6096;VDB=0.456257;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.2:9785484 chr02:009785484 0 W/9785484-9785484 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.314513;DP=5322;DP4=2846,2149,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10527e-07;MQSB=0.500019;RPB=0.669218;SGB=33.8752;VDB=0.91149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.2:9787463 chr02:009787463 0 W/9787463-9787463 FN2593-S SNP G -> C AC=1;AN=198;BQB=0.994884;DP=4004;DP4=1991,1725,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.20059e-14;MQSB=0.69624;RPB=0.967371;SGB=22.1104;VDB=0.972481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.2:9803643 chr02:009803643 0 W/9803643-9803643 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.620282;DP=4001;DP4=1957,1851,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.26238e-07;MQSB=0.999717;RPB=0.920414;SGB=32.9588;VDB=0.110322;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.2:9805655 chr02:009805655 0 W/9805655-9805655 FN-370 Single Base Substitution A-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN4202-S.SNP.2:9816387 chr02:009816387 0 W/9816387-9816387 FN4202-S SNP C -> A AC=1;AN=170;BQB=0.318284;DP=2591;DP4=1403,1096,16,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.78514e-10;MQSB=0.59383;RPB=0.960901;SGB=79.6325;VDB=0.921095;EFF=INTRON(MODIFIER||||1345|LOC_Os02g17140|protein_coding|CODING|LOC_Os02g17140.1|5|1) FN4202-S.SNP.2:9816825 chr02:009816825 0 W/9816825-9816825 FN4202-S SNP G -> T AC=1;AN=170;BQB=0.781298;DP=2627;DP4=1185,1362,8,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.38585e-11;MQSB=0.380789;RPB=0.922081;SGB=96.7413;VDB=0.738666;EFF=INTRON(MODIFIER||||1345|LOC_Os02g17140|protein_coding|CODING|LOC_Os02g17140.1|5|1) FN742-S.SNP.2:9816989 chr02:009816989 0 W/9816989-9816989 FN742-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g17140 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1327-S.SNP.2:9820279 chr02:009820279 0 W/9820279-9820279 FN1327-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g17140 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2788-S.SNP.2:9820728 chr02:009820728 0 W/9820728-9820728 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.695164;DP=3982;DP4=2108,1676,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00025113;MQB=2.31051e-05;MQSB=0.980916;RPB=0.179218;SGB=25.7687;VDB=0.156654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T220I|1345|LOC_Os02g17140|protein_coding|CODING|LOC_Os02g17140.1|3|1) FN1243-S.SNP.2:9838672 chr02:009838672 0 W/9838672-9838672 FN1243-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN4063-S.SNP.2:9844528 chr02:009844528 0 W/9844528-9844528 FN4063-S SNP A -> G AC=1;AN=168;BQB=0.996976;DP=2568;DP4=1189,1247,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.01312e-11;MQSB=0.953624;RPB=0.393051;SGB=5.62151;VDB=0.454079;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.2:9855193 chr02:009855193 0 W/9855193-9855193 FN462-S Single Base Substitution C-A INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3447-S.SNP.2:9855579 chr02:009855579 0 W/9855579-9855579 FN3447-S SNP G -> A AC=1;AN=184;BQB=0.956283;DP=2660;DP4=1148,1414,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.0332645;MQSB=4.0285e-07;RPB=0.197832;SGB=53.2642;VDB=0.0875291;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.2:9857271 chr02:009857271 0 W/9857271-9857271 FN944-S Single Base Substitution C-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3880-S.SNP.2:9857612 chr02:009857612 0 W/9857612-9857612 FN3880-S SNP A -> C AC=2;AN=158;BQB=0.331448;DP=2182;DP4=1007,1072,15,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.32821e-13;MQSB=0.999286;RPB=0.998492;SGB=59.3604;VDB=0.508483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.2:9866120 chr02:009866120 0 W/9866120-9866120 FN1200-S Single Base Substitution C-T INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3661-S.SNP.2:9869349 chr02:009869349 0 W/9869349-9869349 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.795177;DP=2911;DP4=1570,1242,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00114271;MQSB=0.871655;RPB=0.814334;SGB=53.6492;VDB=0.73002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.2:9869493 chr02:009869493 0 W/9869493-9869493 FN3306-S SNP C -> A AC=2;AN=184;BQB=0.988659;DP=2626;DP4=1423,1100,8,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=4.54673e-09;MQSB=0.827728;RPB=0.731831;SGB=84.9167;VDB=0.504344;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.2:9876405 chr02:009876405 0 W/9876405-9876405 FN486-S Single Base Substitution G-T INTERGENIC HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3681-S.SNP.2:9877962 chr02:009877962 0 W/9877962-9877962 FN3681-S SNP G -> A AC=1;AN=190;BQB=0.755666;DP=3242;DP4=1573,1582,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25665e-11;MQSB=0.99973;RPB=0.850221;SGB=85.5263;VDB=0.39033;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D120N|384|LOC_Os02g17230|protein_coding|CODING|LOC_Os02g17230.1|1|1) FN4106-S.SNP.2:9878286 chr02:009878286 0 W/9878286-9878286 FN4106-S SNP G -> T AC=1;AN=182;BQB=0.91339;DP=3312;DP4=1421,1832,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.40204e-05;MQSB=0.999553;RPB=0.626839;SGB=35.0899;VDB=0.77555;EFF=INTRON(MODIFIER||||384|LOC_Os02g17230|protein_coding|CODING|LOC_Os02g17230.1|1|1) FN2731-S.SNP.2:9879872 chr02:009879872 0 W/9879872-9879872 FN2731-S SNP A -> G AC=2;AN=200;BQB=0.872837;DP=5004;DP4=2385,2421,12,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.61001e-18;MQSB=0.357444;RPB=0.406867;SGB=150.973;VDB=0.356644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.2:9882680 chr02:009882680 0 W/9882680-9882680 FN2267-S SNP C -> A AC=2;AN=190;BQB=0.97791;DP=4640;DP4=2115,2119,18,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000215517;MQB=3.77285e-18;MQSB=0.892781;RPB=0.487068;SGB=69.6295;VDB=0.738316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.2:9900242 chr02:009900242 0 W/9900242-9900242 FN1333-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. W554-1-1.SNP.2:9906055 chr02:009906055 0 W/9906055-9906055 W554-1-1 Single Base Substitution A-G INTRON HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2795-S.SNP.2:9914387 chr02:009914387 0 W/9914387-9914387 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.765451;DP=4123;DP4=1835,2121,4,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07748e-09;MQSB=0.96757;RPB=0.967665;SGB=-35.4258;VDB=0.459648;EFF=UTR_3_PRIME(MODIFIER||807||494|LOC_Os02g17292|protein_coding|CODING|LOC_Os02g17292.1|2|1),INTRON(MODIFIER||||213|LOC_Os02g17292|protein_coding|CODING|LOC_Os02g17292.2|1|1) FN1463-S.SNP.2:9921801 chr02:009921801 0 W/9921801-9921801 FN1463-S Single Base Substitution G-C INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3312-S.SNP.2:9925966 chr02:009925966 0 W/9925966-9925966 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.938664;DP=2443;DP4=989,1333,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17151e-08;MQSB=0.465246;RPB=0.91504;SGB=35.7479;VDB=0.559918;EFF=INTRON(MODIFIER||||945|LOC_Os02g17304|protein_coding|CODING|LOC_Os02g17304.1|1|1) FN3312-S.SNP.2:9925968 chr02:009925968 0 W/9925968-9925968 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.917707;DP=2442;DP4=977,1345,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.71139e-08;MQSB=0.648403;RPB=0.925697;SGB=48.7425;VDB=0.636197;EFF=INTRON(MODIFIER||||945|LOC_Os02g17304|protein_coding|CODING|LOC_Os02g17304.1|1|1) FN2539-S.SNP.2:9932758 chr02:009932758 0 W/9932758-9932758 FN2539-S SNP T -> C AC=1;AN=198;BQB=0.812337;DP=3985;DP4=1702,2052,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.75025e-08;MQSB=7.12921e-07;RPB=0.829936;SGB=55.2955;VDB=0.797991;EFF=INTRON(MODIFIER||||430|LOC_Os02g17320|protein_coding|CODING|LOC_Os02g17320.3|6|1) FN1150-S.SNP.2:9940352 chr02:009940352 0 W/9940352-9940352 FN1150-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN-145.SNP.2:9943563 chr02:009943563 0 W/9943563-9943563 FN-145 Single Base Substitution C-A INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-178.SNP.2:9946459 chr02:009946459 0 W/9946459-9946459 FN-178 Single Base Substitution T-G INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1759-S.SNP.2:9948515 chr02:009948515 0 W/9948515-9948515 FN1759-S SNP C -> G AC=1;AN=188;BQB=0.0325666;DP=3747;DP4=1877,1796,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.00717717;MQSB=0.200723;RPB=0.571412;SGB=-110.978;VDB=0.0879635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.2:9948569 chr02:009948569 0 W/9948569-9948569 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.950819;DP=4256;DP4=1803,2106,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=4.06832e-09;MQSB=0.688631;RPB=0.359509;SGB=40.149;VDB=0.753577;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.2:9949463 chr02:009949463 0 W/9949463-9949463 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.653902;DP=3684;DP4=1790,1684,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=5.16021e-08;MQSB=0.00532179;RPB=0.173094;SGB=15.7299;VDB=0.1699;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.2:9950974 chr02:009950974 0 W/9950974-9950974 FN267-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN2545-S.SNP.2:9951299 chr02:009951299 0 W/9951299-9951299 FN2545-S SNP A -> G AC=2;AN=198;BQB=0.704399;DP=4115;DP4=1866,2057,14,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.80004e-19;MQSB=0.973275;RPB=0.995549;SGB=65.676;VDB=0.31226;EFF=INTRON(MODIFIER||||389|LOC_Os02g17330|protein_coding|CODING|LOC_Os02g17330.1|4|1) FN1213-S.SNP.2:9957685 chr02:009957685 0 W/9957685-9957685 FN1213-S Single Base Substitution T-C INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1231-S.SNP.2:9965420 chr02:009965420 0 W/9965420-9965420 FN1231-S Single Base Substitution C-G INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN928-S.SNP.2:9965888 chr02:009965888 0 W/9965888-9965888 FN928-S Single Base Substitution C-G INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN4201-S.SNP.2:9968341 chr02:009968341 0 W/9968341-9968341 FN4201-S SNP C -> A AC=2;AN=170;BQB=0.956071;DP=2608;DP4=1093,1398,7,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.06636e-15;MQSB=0.738025;RPB=0.923525;SGB=110.069;VDB=0.840799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.2:9978346 chr02:009978346 0 W/9978346-9978346 FN3559-S SNP G -> A AC=1;AN=188;BQB=0.883096;DP=3145;DP4=1683,1381,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00063593;MQB=3.68967e-09;MQSB=0.660291;RPB=0.6516;SGB=53.7007;VDB=0.32022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.2:9979822 chr02:009979822 0 W/9979822-9979822 FN3305-S SNP T -> C AC=1;AN=184;BQB=0.825015;DP=2904;DP4=1078,1676,1,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.28617e-07;MQSB=0.976794;RPB=0.948419;SGB=44.2207;VDB=0.450112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2459.SNP.2:9985497 chr02:009985497 0 W/9985497-9985497 FN2459 SNP T -> C AC=2;AN=200;BQB=0.699975;DP=3721;DP4=1625,1577,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.40049e-17;MQSB=0.279344;RPB=0.847904;SGB=84.1935;VDB=0.611148;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q109|719|LOC_Os02g17360|protein_coding|CODING|LOC_Os02g17360.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q137|747|LOC_Os02g17360|protein_coding|CODING|LOC_Os02g17360.1|1|1) FN2451.SNP.2:9990349 chr02:009990349 0 W/9990349-9990349 FN2451 SNP G -> T AC=1;AN=200;BQB=0.888457;DP=4308;DP4=1869,2160,7,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81859e-15;MQSB=0.39619;RPB=0.862228;SGB=60.747;VDB=0.517174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H53Q|83|LOC_Os02g17370|protein_coding|CODING|LOC_Os02g17370.1|2|1) FN924-S.SNP.2:9996929 chr02:009996929 0 W/9996929-9996929 FN924-S Single Base Substitution G-T INTRON HOMO SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3404-S.SNP.2:10015821 chr02:010015821 0 W/10015821-10015821 FN3404-S SNP A -> T AC=1;AN=184;BQB=0.301733;DP=2995;DP4=1386,1497,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00488901;MQSB=0.0116264;RPB=0.106851;SGB=18.2315;VDB=0.563312;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.2:10017659 chr02:010017659 0 W/10017659-10017659 FN302-S Single Base Substitution A-T INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN1641-S.SNP.2:10021217 chr02:010021217 0 W/10021217-10021217 FN1641-S Single Base Substitution T-A INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2315.SNP.2:10025723 chr02:010025723 0 W/10025723-10025723 FN2315 SNP A -> G AC=1;AN=192;BQB=0.0755336;DP=5578;DP4=2010,2908,66,172;HOB=5.42535e-05;ICB=0.000109072;MQ=25;MQ0F=0.145751;MQB=0;MQSB=1.2273e-21;RPB=2.3524e-08;SGB=-4147.54;VDB=2.63139e-21;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.2:10029278 chr02:010029278 0 W/10029278-10029278 FN3865-S SNP G -> A AC=1;AN=158;BQB=0.900031;DP=2427;DP4=1286,1062,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=24;MQ0F=0.107952;MQB=0.949325;MQSB=0;RPB=0.980337;SGB=51.4366;VDB=0.605821;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G610|1506|LOC_Os02g17430|protein_coding|CODING|LOC_Os02g17430.1|3|1) FN2596-S.SNP.2:10032938 chr02:010032938 0 W/10032938-10032938 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.903519;DP=3992;DP4=2069,1715,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000250501;MQB=1.08435e-08;MQSB=0.0803028;RPB=0.154434;SGB=-36.2356;VDB=0.309556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.2:10050083 chr02:010050083 0 W/10050083-10050083 FN3456-S SNP G -> C AC=2;AN=184;BQB=0.957373;DP=3332;DP4=1824,1381,15,15;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.58686e-12;MQSB=0.999682;RPB=0.999146;SGB=95.6183;VDB=0.628723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.2:10050107 chr02:010050107 0 W/10050107-10050107 FN2411 SNP C -> T AC=1;AN=200;BQB=0.103478;DP=4185;DP4=2052,1863,19,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.20505e-08;MQSB=0.255013;RPB=0.455356;SGB=79.9264;VDB=0.582913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4146-S.SNP.2:10052329 chr02:010052329 0 W/10052329-10052329 FN4146-S SNP A -> G AC=2;AN=170;BQB=0.789409;DP=2360;DP4=1023,1163,18,24;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000423729;MQB=6.015e-25;MQSB=0.999546;RPB=0.32048;SGB=175.767;VDB=0.390636;EFF=INTRON(MODIFIER||||343|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.2|1|1),INTRON(MODIFIER||||471|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.1|1|1) FN2116-S.SNP.2:10052872 chr02:010052872 0 W/10052872-10052872 FN2116-S SNP G -> A AC=2;AN=168;BQB=0.980873;DP=2495;DP4=1193,1234,18,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.70097e-16;MQSB=0.975319;RPB=0.96625;SGB=65.9394;VDB=0.557775;EFF=INTRON(MODIFIER||||343|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.2|1|1),INTRON(MODIFIER||||471|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.1|1|1) FN3910-S.SNP.2:10053298 chr02:010053298 0 W/10053298-10053298 FN3910-S SNP A -> G AC=1;AN=158;BQB=0.913768;DP=2371;DP4=1191,1096,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.8516e-08;MQSB=0.909224;RPB=0.406428;SGB=34.0735;VDB=0.289336;EFF=INTRON(MODIFIER||||343|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.2|1|1),INTRON(MODIFIER||||471|LOC_Os02g17470|protein_coding|CODING|LOC_Os02g17470.1|1|1) FN-388.SNP.2:10058100 chr02:010058100 0 W/10058100-10058100 FN-388 Single Base Substitution C-G INTERGENIC HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN960-S.SNP.2:10071459 chr02:010071459 0 W/10071459-10071459 FN960-S Single Base Substitution T-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN670-S.SNP.2:10072433 chr02:010072433 0 W/10072433-10072433 FN670-S Single Base Substitution C-T INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2422.SNP.2:10072731 chr02:010072731 0 W/10072731-10072731 FN2422 SNP A -> G AC=2;AN=200;BQB=0.950529;DP=3983;DP4=1964,1651,27,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000251067;MQB=3.47877e-20;MQSB=0.0346765;RPB=0.291199;SGB=118.061;VDB=0.384168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.2:10078461 chr02:010078461 0 W/10078461-10078461 FN2377 SNP A -> T AC=1;AN=192;BQB=0.832385;DP=5325;DP4=2627,2339,17,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.10235e-17;MQSB=0.798946;RPB=0.770894;SGB=30.82;VDB=0.718537;EFF=SPLICE_SITE_REGION(LOW||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.1|9|1),SPLICE_SITE_REGION(LOW||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.2|8|1),SPLICE_SITE_REGION(LOW||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.3|9|1),INTRON(MODIFIER||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.1|9|1),INTRON(MODIFIER||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.2|8|1),INTRON(MODIFIER||||481|LOC_Os02g17500|protein_coding|CODING|LOC_Os02g17500.3|9|1) FN3535-S.SNP.2:10089453 chr02:010089453 0 W/10089453-10089453 FN3535-S SNP T -> G AC=1;AN=188;BQB=0.79168;DP=4348;DP4=2186,1929,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.80214e-08;MQSB=0.78511;RPB=0.475833;SGB=5.5382;VDB=0.562987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K268Q|601|LOC_Os02g17534|protein_coding|CODING|LOC_Os02g17534.1|2|1) FN3630-S.SNP.2:10092910 chr02:010092910 0 W/10092910-10092910 FN3630-S SNP T -> C AC=1;AN=190;BQB=0.688516;DP=1435;DP4=850,505,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.7166e-05;MQSB=0.997973;RPB=0.96322;SGB=10.8904;VDB=0.00806222;EFF=INTRON(MODIFIER||||601|LOC_Os02g17534|protein_coding|CODING|LOC_Os02g17534.1|1|1) FN534-S.SNP.2:10093655 chr02:010093655 0 W/10093655-10093655 FN534-S Single Base Substitution A-G INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1106-S.SNP.2:10096285 chr02:010096285 0 W/10096285-10096285 FN1106-S Single Base Substitution C-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN4119-S.SNP.2:10102168 chr02:010102168 0 W/10102168-10102168 FN4119-S SNP A -> T AC=2;AN=182;BQB=0.982828;DP=2857;DP4=1330,1341,13,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.14522e-14;MQSB=0.992862;RPB=0.74361;SGB=88.2906;VDB=0.791998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K441M|846|LOC_Os02g17550|protein_coding|CODING|LOC_Os02g17550.1|3|1),SPLICE_SITE_REGION(LOW||||846|LOC_Os02g17550|protein_coding|CODING|LOC_Os02g17550.1|3|1) FN704-S.SNP.2:10102959 chr02:010102959 0 W/10102959-10102959 FN704-S Single Base Substitution C-T INTRON HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3469-S.SNP.2:10108463 chr02:010108463 0 W/10108463-10108463 FN3469-S SNP G -> A AC=1;AN=184;BQB=0.861184;DP=3075;DP4=1487,1519,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000650407;MQB=5.49957e-07;MQSB=0.394368;RPB=0.581985;SGB=53.2642;VDB=0.294263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.2:10112219 chr02:010112219 0 W/10112219-10112219 FN1371-S Single Base Substitution C-A INTRON Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN620-S.SNP.2:10115465 chr02:010115465 0 W/10115465-10115465 FN620-S Single Base Substitution C-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN620-S.SNP.2:10115466 chr02:010115466 0 W/10115466-10115466 FN620-S Single Base Substitution C-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1316-S.SNP.2:10119914 chr02:010119914 0 W/10119914-10119914 FN1316-S Single Base Substitution A-C INTERGENIC HET SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3950-S.SNP.2:10120007 chr02:010120007 0 W/10120007-10120007 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.960739;DP=2630;DP4=1291,1230,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.86928e-14;MQSB=0.999394;RPB=0.283048;SGB=96.481;VDB=0.336986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.2:10122854 chr02:010122854 0 W/10122854-10122854 FN3676-S SNP G -> T AC=1;AN=190;BQB=0.911994;DP=3045;DP4=1456,1467,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000254421;MQSB=0.969774;RPB=0.273955;SGB=30.8803;VDB=0.226103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.2:10131158 chr02:010131158 0 W/10131158-10131158 FN2088-S SNP G -> A AC=1;AN=168;BQB=0.774626;DP=2850;DP4=1638,1161,10,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10518e-11;MQSB=0.903898;RPB=0.508113;SGB=51.3545;VDB=0.31186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.2:10133408 chr02:010133408 0 W/10133408-10133408 FN2559-S SNP T -> C AC=1;AN=198;BQB=0.901235;DP=4420;DP4=2167,1993,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.61039e-05;MQSB=0.962241;RPB=0.959875;SGB=-1.81641;VDB=0.996974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.2:10138390 chr02:010138390 0 W/10138390-10138390 FN1396-S Single Base Substitution C-G INTRON HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN3839-S.SNP.2:10138651 chr02:010138651 0 W/10138651-10138651 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.999086;DP=2767;DP4=1240,1442,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70327e-10;MQSB=0.998366;RPB=0.581223;SGB=53.8699;VDB=0.0675475;EFF=INTRON(MODIFIER||||198|LOC_Os02g17620|protein_coding|CODING|LOC_Os02g17620.1|4|1) FN403-S.SNP.2:10139094 chr02:010139094 0 W/10139094-10139094 FN403-S Single Base Substitution G-A INTRON HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3452-S.SNP.2:10148522 chr02:010148522 0 W/10148522-10148522 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.681012;DP=2560;DP4=1292,1171,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00235848;MQSB=0.934011;RPB=0.0613948;SGB=18.1394;VDB=0.244443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.2:10154136 chr02:010154136 0 W/10154136-10154136 FN2682-S SNP T -> A AC=1;AN=200;BQB=0.573583;DP=5106;DP4=2617,2245,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.09287e-07;MQSB=0.999781;RPB=0.715282;SGB=40.4492;VDB=0.491369;EFF=INTRON(MODIFIER||||246|LOC_Os02g17640|protein_coding|CODING|LOC_Os02g17640.1|2|1) FN915-S.SNP.2:10155341 chr02:010155341 0 W/10155341-10155341 FN915-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN-371.SNP.2:10158569 chr02:010158569 0 W/10158569-10158569 FN-371 Single Base Substitution G-A INTRON HOMO SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN725-S.SNP.2:10161672 chr02:010161672 0 W/10161672-10161672 FN725-S Single Base Substitution C-A INTRON HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2201-S.SNP.2:10163884 chr02:010163884 0 W/10163884-10163884 FN2201-S SNP T -> C AC=2;AN=190;BQB=0.1565;DP=5217;DP4=2104,2829,31,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33401e-31;MQSB=1;RPB=0.533004;SGB=254.02;VDB=0.030415;EFF=INTRON(MODIFIER||||328|LOC_Os02g17650|protein_coding|CODING|LOC_Os02g17650.2|2|1),INTRON(MODIFIER||||470|LOC_Os02g17650|protein_coding|CODING|LOC_Os02g17650.1|2|1) FN3443-S.SNP.2:10165100 chr02:010165100 0 W/10165100-10165100 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.99766;DP=2908;DP4=1512,1247,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.22546e-08;MQSB=0.816405;RPB=0.984807;SGB=49.835;VDB=0.686706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1293-S.SNP.2:10167038 chr02:010167038 0 W/10167038-10167038 FN1293-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN3477-S.SNP.2:10168809 chr02:010168809 0 W/10168809-10168809 FN3477-S SNP C -> A AC=1;AN=184;BQB=0.95547;DP=2957;DP4=1620,1236,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27853e-07;MQSB=0.984667;RPB=0.981012;SGB=48.7425;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.2:10171947 chr02:010171947 0 W/10171947-10171947 FN2789-S SNP G -> A AC=1;AN=198;BQB=0.454905;DP=4442;DP4=2138,2050,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.71422e-12;MQSB=0.605518;RPB=0.783653;SGB=81.7147;VDB=0.393334;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.2:10173541 chr02:010173541 0 W/10173541-10173541 FN-155 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g17670 retrotransposon protein, putative, unclassified, expressed SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2210-S.SNP.2:10178197 chr02:010178197 0 W/10178197-10178197 FN2210-S SNP A -> T AC=1;AN=190;BQB=0.283481;DP=4935;DP4=2638,1963,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000405268;MQB=5.12666e-07;MQSB=0.768465;RPB=0.8908;SGB=36.1006;VDB=0.448076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.2:10189574 chr02:010189574 0 W/10189574-10189574 FN1532-S Single Base Substitution G-A INTERGENIC Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2458.SNP.2:10189574 chr02:010189574 0 W/10189574-10189574 FN2458 SNP G -> A AC=2;AN=200;BQB=0.996098;DP=4650;DP4=2172,2230,19,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.46133e-21;MQSB=0.872464;RPB=0.171213;SGB=134.004;VDB=0.533501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.2:10190736 chr02:010190736 0 W/10190736-10190736 FN2470 SNP G -> A AC=1;AN=200;BQB=0.84212;DP=4888;DP4=2280,2247,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80608e-07;MQSB=0.928064;RPB=0.139763;SGB=36.6644;VDB=0.207102;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.2:10192932 chr02:010192932 0 W/10192932-10192932 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.825424;DP=3981;DP4=1757,1970,18,24;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.54808e-19;MQSB=8.47607e-05;RPB=0.920521;SGB=94.2223;VDB=0.534927;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.2:10194831 chr02:010194831 0 W/10194831-10194831 FN2795-S SNP C -> A AC=1;AN=198;BQB=0.54077;DP=4119;DP4=2003,1931,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.08353e-12;MQSB=0.00134714;RPB=0.76902;SGB=86.8856;VDB=0.747866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.2:10195616 chr02:010195616 0 W/10195616-10195616 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.935584;DP=1321;DP4=610,599,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00719166;MQSB=0.00300318;RPB=0.982434;SGB=28.9929;VDB=0.96302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.2:10196783 chr02:010196783 0 W/10196783-10196783 FN2403 SNP T -> C AC=1;AN=200;BQB=0.537658;DP=3874;DP4=2089,1501,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000258131;MQB=5.88061e-06;MQSB=0.884676;RPB=0.866111;SGB=29.4541;VDB=0.758178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.2:10199168 chr02:010199168 0 W/10199168-10199168 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.956286;DP=2839;DP4=1438,1296,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21271e-07;MQSB=0.784333;RPB=0.997534;SGB=36.1006;VDB=0.536049;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN-387.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN-387 Single Base Substitution T-A INTRON HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-66.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN-66 Single Base Substitution T-A INTRON HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1042-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN1042-S Single Base Substitution T-A INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1300-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN1300-S Single Base Substitution T-A INTRON HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1473-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN1473-S Single Base Substitution T-A INTRON HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN1727-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN1727-S SNP T -> A AC=1;AN=188;BQB=0.367643;DP=3579;DP4=1223,2328,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.8429e-09;MQSB=0.9896;RPB=0.979418;SGB=38.7926;VDB=0.319555;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN2120-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN2120-S SNP T -> A AC=1;AN=168;BQB=0.0162729;DP=3190;DP4=1385,1776,5,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.83016e-09;MQSB=0.999463;RPB=0.686241;SGB=-95.493;VDB=0.167325;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN3376-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN3376-S SNP T -> A AC=2;AN=184;BQB=0.98992;DP=3217;DP4=1592,1460,22,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.89146e-24;MQSB=0.997347;RPB=0.994803;SGB=144.923;VDB=0.988006;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN347-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN347-S Single Base Substitution T-A INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3766-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN3766-S SNP T -> A AC=2;AN=190;BQB=0.999575;DP=2640;DP4=1338,1223,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78781e-12;MQSB=0.999219;RPB=0.0999516;SGB=94.6341;VDB=0.736666;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN3897-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN3897-S SNP T -> A AC=2;AN=158;BQB=0.813614;DP=2431;DP4=1178,1141,23,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.9676e-22;MQSB=0.925247;RPB=0.85665;SGB=173.781;VDB=0.258095;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN4024-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN4024-S SNP T -> A AC=2;AN=168;BQB=0.514031;DP=2711;DP4=1353,1232,12,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.20225e-14;MQSB=0.820332;RPB=0.750741;SGB=51.3545;VDB=0.145741;EFF=INTRON(MODIFIER||||171|LOC_Os02g17690|protein_coding|CODING|LOC_Os02g17690.1|3|1) FN474-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN474-S Single Base Substitution T-A INTRON HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN696-S Single Base Substitution T-A INTRON HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN768-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN768-S Single Base Substitution T-A INTRON HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN874-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN874-S Single Base Substitution T-A INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN949-S Single Base Substitution T-A INTRON HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN975-S Single Base Substitution T-A INTRON HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.2:10199560 chr02:010199560 0 W/10199560-10199560 FN_935-1 Single Base Substitution T-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3356-S.SNP.2:10200899 chr02:010200899 0 W/10200899-10200899 FN3356-S SNP G -> A AC=2;AN=184;BQB=0.996309;DP=3646;DP4=1857,1660,10,17;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=6.2297e-11;MQSB=3.26931e-05;RPB=0.840059;SGB=116.569;VDB=0.846081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.2:10208408 chr02:010208408 0 W/10208408-10208408 FN3886-S SNP T -> C AC=2;AN=158;BQB=0.79324;DP=2312;DP4=1155,1075,12,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.62126e-15;MQSB=0.985031;RPB=0.899319;SGB=99.5005;VDB=0.926345;EFF=INTRON(MODIFIER||||499|LOC_Os02g17700|protein_coding|CODING|LOC_Os02g17700.1|2|1) FN821-S.SNP.2:10209925 chr02:010209925 0 W/10209925-10209925 FN821-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g17700 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN695-S.SNP.2:10238283 chr02:010238283 0 W/10238283-10238283 FN695-S Single Base Substitution G-T INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2398.SNP.2:10253984 chr02:010253984 0 W/10253984-10253984 FN2398 SNP G -> A AC=1;AN=200;BQB=0.973816;DP=4651;DP4=2194,2155,5,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000621333;MQSB=0.999396;RPB=0.895755;SGB=13.8539;VDB=0.242386;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.2:10255710 chr02:010255710 0 W/10255710-10255710 FN1179-S Single Base Substitution T-C INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1179-S.SNP.2:10255711 chr02:010255711 0 W/10255711-10255711 FN1179-S Single Base Substitution A-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2458.SNP.2:10257481 chr02:010257481 0 W/10257481-10257481 FN2458 SNP T -> A AC=2;AN=200;BQB=0.778448;DP=3913;DP4=1633,1586,22,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46411e-17;MQSB=0.549333;RPB=0.946138;SGB=-1.612;VDB=0.708537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.2:10258044 chr02:010258044 0 W/10258044-10258044 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.841644;DP=2889;DP4=1419,1439,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=8.34544e-05;MQSB=0.997929;RPB=0.956486;SGB=-0.101747;VDB=0.93464;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.2:10265271 chr02:010265271 0 W/10265271-10265271 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.902678;DP=2533;DP4=1212,1227,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55115e-10;MQSB=0.762344;RPB=0.966141;SGB=84.9167;VDB=0.124831;EFF=INTRON(MODIFIER||||539|LOC_Os02g17760|protein_coding|CODING|LOC_Os02g17760.1|1|1) FN4180-S.SNP.2:10266059 chr02:010266059 0 W/10266059-10266059 FN4180-S SNP A -> C AC=2;AN=170;BQB=0.906506;DP=2499;DP4=1283,1105,12,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.58706e-09;MQSB=0.999832;RPB=0.425324;SGB=52.0913;VDB=0.924392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Cac|N363H|539|LOC_Os02g17760|protein_coding|CODING|LOC_Os02g17760.1|2|1) FN_N1-26-1.SNP.2:10283665 chr02:010283665 0 W/10283665-10283665 FN_N1-26-1 Single Base Substitution T-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN2627-S.SNP.2:10288150 chr02:010288150 0 W/10288150-10288150 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.548838;DP=4156;DP4=1973,1964,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82407e-08;MQSB=0.921899;RPB=0.54912;SGB=3.06925;VDB=0.326291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-310.SNP.2:10290905 chr02:010290905 0 W/10290905-10290905 FN-310 Single Base Substitution T-C INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN2173-S.SNP.2:10291027 chr02:010291027 0 W/10291027-10291027 FN2173-S SNP G -> A AC=2;AN=168;BQB=0.679123;DP=3826;DP4=2270,1460,35,20;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0133298;MQB=0.953891;MQSB=0.0716574;RPB=0.161727;SGB=-415.406;VDB=0.850316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.2:10292285 chr02:010292285 0 W/10292285-10292285 FN3695-S SNP C -> T AC=1;AN=190;BQB=0.890796;DP=2839;DP4=1193,1520,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00211342;MQB=2.52286e-08;MQSB=0.830635;RPB=0.813958;SGB=18.552;VDB=0.777864;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.2:10292847 chr02:010292847 0 W/10292847-10292847 FN700-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN3530-S.SNP.2:10295207 chr02:010295207 0 W/10295207-10295207 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.99737;DP=3005;DP4=1459,1450,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83573e-12;MQSB=0.981331;RPB=0.873129;SGB=71.4172;VDB=0.240226;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.2:10295661 chr02:010295661 0 W/10295661-10295661 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.998002;DP=4841;DP4=2331,2201,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206569;MQB=3.53413e-10;MQSB=0.890084;RPB=0.99804;SGB=33.8752;VDB=0.390249;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.2:10298364 chr02:010298364 0 W/10298364-10298364 FN459-S Single Base Substitution C-A INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1423-S.SNP.2:10299166 chr02:010299166 0 W/10299166-10299166 FN1423-S Single Base Substitution G-A INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3901-S.SNP.2:10300505 chr02:010300505 0 W/10300505-10300505 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.720545;DP=2410;DP4=1104,1223,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.25581e-07;MQSB=0.993784;RPB=0.91816;SGB=55.806;VDB=0.927913;EFF=INTRON(MODIFIER||||663|LOC_Os02g17810|protein_coding|CODING|LOC_Os02g17810.1|6|1) FN889-S.SNP.2:10301591 chr02:010301591 0 W/10301591-10301591 FN889-S Single Base Substitution T-C INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN-311.SNP.2:10304419 chr02:010304419 0 W/10304419-10304419 FN-311 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g17820 retrotransposon protein, putative, unclassified, expressed SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3933-S.SNP.2:10305818 chr02:010305818 0 W/10305818-10305818 FN3933-S SNP G -> C AC=1;AN=158;BQB=0.995447;DP=2538;DP4=1223,1189,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.92967e-09;MQSB=0.865872;RPB=0.991624;SGB=64.5449;VDB=0.894396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P590A|1724|LOC_Os02g17820|protein_coding|CODING|LOC_Os02g17820.1|4|1) FN3778-S.SNP.2:10314924 chr02:010314924 0 W/10314924-10314924 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.999879;DP=2588;DP4=1389,1108,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87557e-12;MQSB=0.991352;RPB=0.92056;SGB=57.4238;VDB=0.872434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P88L|90|LOC_Os02g17830|protein_coding|CODING|LOC_Os02g17830.1|2|1) FN3778-S.SNP.2:10314925 chr02:010314925 0 W/10314925-10314925 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.99979;DP=2571;DP4=1371,1090,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1283e-10;MQSB=0.972001;RPB=0.91939;SGB=53.8699;VDB=0.92666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P88S|90|LOC_Os02g17830|protein_coding|CODING|LOC_Os02g17830.1|2|1) FN3778-S.SNP.2:10315088 chr02:010315088 0 W/10315088-10315088 FN3778-S SNP C -> A AC=1;AN=190;BQB=0.447726;DP=2595;DP4=1374,1148,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09697e-05;MQSB=0.994102;RPB=0.960791;SGB=36.1006;VDB=0.296245;EFF=INTRON(MODIFIER||||90|LOC_Os02g17830|protein_coding|CODING|LOC_Os02g17830.1|1|1) FN1065-S.SNP.2:10316559 chr02:010316559 0 W/10316559-10316559 FN1065-S Single Base Substitution T-C INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2626-S.SNP.2:10331730 chr02:010331730 0 W/10331730-10331730 FN2626-S SNP G -> T AC=1;AN=200;BQB=0.964459;DP=4645;DP4=2296,2090,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33697e-05;MQSB=0.818856;RPB=0.849521;SGB=25.849;VDB=0.931139;EFF=INTRON(MODIFIER||||130|LOC_Os02g17850|protein_coding|CODING|LOC_Os02g17850.1|1|1) FN-374.SNP.2:10339783 chr02:010339783 0 W/10339783-10339783 FN-374 Single Base Substitution A-T INTERGENIC HOMO SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN957-S.SNP.2:10345265 chr02:010345265 0 W/10345265-10345265 FN957-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1304-S.SNP.2:10349583 chr02:010349583 0 W/10349583-10349583 FN1304-S Single Base Substitution G-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1304-S.SNP.2:10349584 chr02:010349584 0 W/10349584-10349584 FN1304-S Single Base Substitution G-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN451-S.SNP.2:10349716 chr02:010349716 0 W/10349716-10349716 FN451-S Single Base Substitution G-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN451-S.SNP.2:10349717 chr02:010349717 0 W/10349717-10349717 FN451-S Single Base Substitution G-A INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1435-S.SNP.2:10365641 chr02:010365641 0 W/10365641-10365641 FN1435-S Single Base Substitution T-C INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1576-S.SNP.2:10374290 chr02:010374290 0 W/10374290-10374290 FN1576-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3785-S.SNP.2:10377003 chr02:010377003 0 W/10377003-10377003 FN3785-S SNP T -> A AC=1;AN=190;BQB=0.754769;DP=2755;DP4=1382,1283,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41408e-06;MQSB=0.945727;RPB=0.790388;SGB=21.8853;VDB=0.835774;EFF=INTRON(MODIFIER||||416|LOC_Os02g17910|protein_coding|CODING|LOC_Os02g17910.1|14|1) FN2489.SNP.2:10394563 chr02:010394563 0 W/10394563-10394563 FN2489 SNP G -> A AC=1;AN=200;BQB=0.187206;DP=4861;DP4=2085,2407,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05585e-09;MQSB=0.905798;RPB=0.957683;SGB=24.2746;VDB=0.0709304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.2:10396762 chr02:010396762 0 W/10396762-10396762 FN2477 SNP A -> C AC=1;AN=200;BQB=0.727557;DP=4934;DP4=2344,2388,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.9124e-15;MQSB=0.81443;RPB=0.891039;SGB=76.3213;VDB=0.319349;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.2:10399803 chr02:010399803 0 W/10399803-10399803 FN886-S Single Base Substitution T-G INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1737-S.SNP.2:10401778 chr02:010401778 0 W/10401778-10401778 FN1737-S SNP T -> A AC=2;AN=188;BQB=0.999116;DP=3233;DP4=1171,2012,18,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06474e-18;MQSB=0.993442;RPB=0.318162;SGB=37.9474;VDB=0.0442226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.2:10402420 chr02:010402420 0 W/10402420-10402420 FN-336 Single Base Substitution C-G INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2242-S.SNP.2:10402802 chr02:010402802 0 W/10402802-10402802 FN2242-S SNP T -> A AC=1;AN=190;BQB=0.595831;DP=4988;DP4=2336,2315,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38356e-11;MQSB=0.928906;RPB=0.884731;SGB=44.0907;VDB=0.958411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.2:10403395 chr02:010403395 0 W/10403395-10403395 FN2477 SNP C -> A AC=1;AN=200;BQB=0.997408;DP=4959;DP4=2085,2489,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63199e-09;MQSB=0.0418613;RPB=0.997782;SGB=51.0851;VDB=0.244097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.2:10407006 chr02:010407006 0 W/10407006-10407006 FN2332 SNP A -> G AC=1;AN=192;BQB=0.0649251;DP=1719;DP4=19,1621,1,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.87768e-05;MQSB=0.995855;RPB=0.365711;SGB=39.78;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.2:10414775 chr02:010414775 0 W/10414775-10414775 FN2488 SNP C -> T AC=1;AN=200;BQB=0.993082;DP=5186;DP4=2312,2538,12,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.8182e-19;MQSB=0.75655;RPB=0.288124;SGB=108.768;VDB=0.022774;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C1699|1780|LOC_Os02g17960|protein_coding|CODING|LOC_Os02g17960.1|11|1) FN-335.SNP.2:10416176 chr02:010416176 0 W/10416176-10416176 FN-335 Single Base Substitution G-A INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-31.SNP.2:10416754 chr02:010416754 0 W/10416754-10416754 FN-31 Single Base Substitution A-G INTERGENIC Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN2467.SNP.2:10417295 chr02:010417295 0 W/10417295-10417295 FN2467 SNP T -> C AC=1;AN=200;BQB=0.807093;DP=4579;DP4=2488,1830,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.15373e-10;MQSB=0.167828;RPB=0.941867;SGB=61.9006;VDB=0.0835773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.2:10418647 chr02:010418647 0 W/10418647-10418647 FN2711-S SNP T -> A AC=1;AN=200;BQB=0.523955;DP=4627;DP4=2141,2328,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000864491;MQB=1.81962e-05;MQSB=0.130047;RPB=0.328993;SGB=49.6594;VDB=0.674631;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.2:10429460 chr02:010429460 0 W/10429460-10429460 FN2326 SNP A -> G AC=1;AN=192;BQB=0.929931;DP=5403;DP4=2605,2514,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000185082;MQB=5.99135e-12;MQSB=0.999942;RPB=0.999979;SGB=57.6018;VDB=0.734212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.2:10430473 chr02:010430473 0 W/10430473-10430473 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.790534;DP=3027;DP4=1511,1410,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19882e-06;MQSB=0.969634;RPB=0.579591;SGB=53.6492;VDB=0.996872;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.2:10441273 chr02:010441273 0 W/10441273-10441273 FN-246 Single Base Substitution T-A INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3710-S.SNP.2:10442382 chr02:010442382 0 W/10442382-10442382 FN3710-S SNP G -> A AC=2;AN=190;BQB=0.930085;DP=2926;DP4=1464,1366,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.22521e-12;MQSB=0.872312;RPB=0.639972;SGB=75.1932;VDB=0.83705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.2:10449090 chr02:010449090 0 W/10449090-10449090 FN2670-S SNP T -> C AC=2;AN=200;BQB=0.983634;DP=4888;DP4=2301,2350,28,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.71117e-30;MQSB=0.997226;RPB=0.968322;SGB=123.271;VDB=0.406043;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P924|1125|LOC_Os02g18000|protein_coding|CODING|LOC_Os02g18000.1|5|1) FN993-S.SNP.2:10450692 chr02:010450692 0 W/10450692-10450692 FN993-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN993-S.SNP.2:10450694 chr02:010450694 0 W/10450694-10450694 FN993-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN993-S.SNP.2:10450697 chr02:010450697 0 W/10450697-10450697 FN993-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN-237.SNP.2:10454053 chr02:010454053 0 W/10454053-10454053 FN-237 Single Base Substitution G-A INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2680-S.SNP.2:10457985 chr02:010457985 0 W/10457985-10457985 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.822129;DP=4451;DP4=1885,2276,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31432e-14;MQSB=0.78691;RPB=0.930189;SGB=23.9365;VDB=0.628159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R82H|282|LOC_Os02g18020|protein_coding|CODING|LOC_Os02g18020.1|1|1) FN1619-S.SNP.2:10458660 chr02:010458660 0 W/10458660-10458660 FN1619-S Single Base Substitution G-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-247.SNP.2:10467454 chr02:010467454 0 W/10467454-10467454 FN-247 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g18040 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2081-S.SNP.2:10469113 chr02:010469113 0 W/10469113-10469113 FN2081-S SNP G -> T AC=2;AN=168;BQB=0.776523;DP=2456;DP4=1764,626,33,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.85155e-18;MQSB=0.828624;RPB=0.835043;SGB=-6.75618;VDB=0.3735;EFF=INTRON(MODIFIER||||1598|LOC_Os02g18040|protein_coding|CODING|LOC_Os02g18040.1|5|1) FN1104-S.SNP.2:10475063 chr02:010475063 0 W/10475063-10475063 FN1104-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g18040 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1175-S.SNP.2:10482799 chr02:010482799 0 W/10482799-10482799 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3412-S.SNP.2:10486243 chr02:010486243 0 W/10486243-10486243 FN3412-S SNP T -> C AC=1;AN=184;BQB=0.998734;DP=2672;DP4=1349,1192,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000374252;MQB=1.78117e-05;MQSB=0.527516;RPB=0.932213;SGB=39.699;VDB=0.139654;EFF=UTR_3_PRIME(MODIFIER||2451||127|LOC_Os02g18064|protein_coding|CODING|LOC_Os02g18064.1|2|1) FN4052-S.SNP.2:10487272 chr02:010487272 0 W/10487272-10487272 FN4052-S SNP T -> C AC=2;AN=168;BQB=0.748627;DP=2861;DP4=1463,1232,20,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.27909e-22;MQSB=0.996984;RPB=0.855512;SGB=92.6784;VDB=0.470447;EFF=UTR_3_PRIME(MODIFIER||3480||127|LOC_Os02g18064|protein_coding|CODING|LOC_Os02g18064.1|2|1) FN1217-S.SNP.2:10489766 chr02:010489766 0 W/10489766-10489766 FN1217-S Single Base Substitution G-C INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN4271-S.SNP.2:10495757 chr02:010495757 0 W/10495757-10495757 FN4271-S SNP C -> A AC=1;AN=170;BQB=0.746385;DP=2459;DP4=1354,1040,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.87697e-05;MQSB=0.54826;RPB=0.489724;SGB=56.7575;VDB=0.17229;EFF=INTRON(MODIFIER||||967|LOC_Os02g18070|protein_coding|CODING|LOC_Os02g18070.1|5|1) FN817-S.SNP.2:10497190 chr02:010497190 0 W/10497190-10497190 FN817-S Single Base Substitution T-C INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN817-S.SNP.2:10498557 chr02:010498557 0 W/10498557-10498557 FN817-S Single Base Substitution A-G INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3362-S.SNP.2:10498918 chr02:010498918 0 W/10498918-10498918 FN3362-S SNP C -> T AC=1;AN=184;BQB=1;DP=2991;DP4=1520,1331,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.338e-14;MQSB=0.889216;RPB=0.996592;SGB=70.9657;VDB=0.561772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.2:10502815 chr02:010502815 0 W/10502815-10502815 FN1414-S Single Base Substitution T-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1286-S.SNP.2:10506171 chr02:010506171 0 W/10506171-10506171 FN1286-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g18080 NB-ARC domain containing protein, expressed SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN4224-S.SNP.2:10513758 chr02:010513758 0 W/10513758-10513758 FN4224-S SNP C -> G AC=1;AN=170;BQB=0.999162;DP=2424;DP4=1284,1082,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.54108e-09;MQSB=0.30835;RPB=0.951429;SGB=56.7575;VDB=0.458705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.2:10514686 chr02:010514686 0 W/10514686-10514686 FN2276-S SNP C -> T AC=2;AN=190;BQB=0.0424052;DP=4468;DP4=2024,1983,21,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.91212e-20;MQSB=0.83918;RPB=0.991859;SGB=53.8352;VDB=0.665649;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A58|134|LOC_Os02g18100|protein_coding|CODING|LOC_Os02g18100.1|1|1) FN3750-S.SNP.2:10514723 chr02:010514723 0 W/10514723-10514723 FN3750-S SNP G -> A AC=1;AN=190;BQB=0.989084;DP=2889;DP4=1305,1485,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12553e-10;MQSB=0.954959;RPB=0.941166;SGB=76.4186;VDB=0.0491062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D71N|134|LOC_Os02g18100|protein_coding|CODING|LOC_Os02g18100.1|1|1) FN229-S.SNP.2:10522778 chr02:010522778 0 W/10522778-10522778 FN229-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g18110 hypothetical protein SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2408.SNP.2:10524055 chr02:010524055 0 W/10524055-10524055 FN2408 SNP A -> T AC=1;AN=200;BQB=0.632733;DP=3778;DP4=2275,1167,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.16436e-07;MQSB=0.683177;RPB=0.999976;SGB=13.8539;VDB=0.364721;EFF=INTRON(MODIFIER||||123|LOC_Os02g18110|protein_coding|CODING|LOC_Os02g18110.1|3|1) FN904-S.SNP.2:10524337 chr02:010524337 0 W/10524337-10524337 FN904-S Single Base Substitution C-A INTRON HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN672-S.SNP.2:10527094 chr02:010527094 0 W/10527094-10527094 FN672-S Single Base Substitution G-A INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN4234-S.SNP.2:10533999 chr02:010533999 0 W/10533999-10533999 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.300486;DP=2563;DP4=1166,1341,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00075084;MQSB=0.880018;RPB=0.347734;SGB=21.1076;VDB=0.666297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.2:10539599 chr02:010539599 0 W/10539599-10539599 FN2651-S SNP G -> T AC=1;AN=200;BQB=0.764963;DP=4996;DP4=2491,2174,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97796e-14;MQSB=0.991331;RPB=0.946385;SGB=25.5416;VDB=0.352384;EFF=INTRON(MODIFIER||||902|LOC_Os02g18140|protein_coding|CODING|LOC_Os02g18140.1|3|1) FN395-S.SNP.2:10550495 chr02:010550495 0 W/10550495-10550495 FN395-S Single Base Substitution G-T INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN395-S.SNP.2:10550496 chr02:010550496 0 W/10550496-10550496 FN395-S Single Base Substitution A-T INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3729-S.SNP.2:10551858 chr02:010551858 0 W/10551858-10551858 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.996203;DP=3127;DP4=1569,1438,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=1.70881e-07;MQSB=0.772573;RPB=0.966773;SGB=94.6341;VDB=0.969654;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.2:10564645 chr02:010564645 0 W/10564645-10564645 FN-290 Single Base Substitution G-T INTERGENIC HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN660-S.SNP.2:10571618 chr02:010571618 0 W/10571618-10571618 FN660-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g18200 retrotransposon protein, putative, unclassified SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1459-S.SNP.2:10575966 chr02:010575966 0 W/10575966-10575966 FN1459-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g18210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN3452-S.SNP.2:10577018 chr02:010577018 0 W/10577018-10577018 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.919052;DP=3836;DP4=1537,2190,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0576121;MQB=0.0356896;MQSB=8.57607e-22;RPB=0.981858;SGB=39.699;VDB=0.91494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.2:10585808 chr02:010585808 0 W/10585808-10585808 FN3596-S SNP T -> C AC=2;AN=186;BQB=0.746998;DP=2669;DP4=1159,1403,22,15;HOB=0.0212741;ICB=0.494682;MQ=42;MQ0F=0.0101161;MQB=3.56669e-11;MQSB=0.893329;RPB=0.255617;SGB=162.561;VDB=0.0713791;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T6|760|LOC_Os02g18230|protein_coding|CODING|LOC_Os02g18230.1|1|1) FN462-S.SNP.2:10594535 chr02:010594535 0 W/10594535-10594535 FN462-S Single Base Substitution G-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3909-S.SNP.2:10597444 chr02:010597444 0 W/10597444-10597444 FN3909-S SNP T -> A AC=1;AN=158;BQB=0.813118;DP=2023;DP4=943,926,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.11453e-07;MQSB=0.299301;RPB=0.893272;SGB=44.1818;VDB=0.307546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.2:10600531 chr02:010600531 0 W/10600531-10600531 FN1060-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g18280 retrotransposon protein, putative, unclassified, expressed SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3709-S.SNP.2:10601239 chr02:010601239 0 W/10601239-10601239 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.951788;DP=2628;DP4=1292,1265,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.000994872;MQSB=3.25071e-18;RPB=0.867081;SGB=35.4339;VDB=0.532922;EFF=INTRON(MODIFIER||||467|LOC_Os02g18280|protein_coding|CODING|LOC_Os02g18280.1|2|1) FN703-S.SNP.2:10604647 chr02:010604647 0 W/10604647-10604647 FN703-S Single Base Substitution T-A STOP_GAINED HOMO LOC_Os02g18290 retrotransposon protein, putative, unclassified, expressed SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3848-S.SNP.2:10610528 chr02:010610528 0 W/10610528-10610528 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.940336;DP=2451;DP4=1289,1079,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000407997;MQB=2.70774e-06;MQSB=0.12948;RPB=0.998403;SGB=38.3284;VDB=0.667402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.2:10616940 chr02:010616940 0 W/10616940-10616940 FN2491 SNP G -> T AC=1;AN=200;BQB=0.0273383;DP=4751;DP4=2370,2130,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.71103e-12;MQSB=0.999948;RPB=0.441879;SGB=52.9314;VDB=0.871036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.2:10617941 chr02:010617941 0 W/10617941-10617941 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.404527;DP=2662;DP4=1839,737,21,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.93501e-07;MQSB=0.942364;RPB=0.530236;SGB=-98.0622;VDB=0.544853;EFF=INTRON(MODIFIER||||103|LOC_Os02g18300|protein_coding|CODING|LOC_Os02g18300.1|1|1) FN2681-S.SNP.2:10619018 chr02:010619018 0 W/10619018-10619018 FN2681-S SNP T -> C AC=1;AN=200;BQB=0.600345;DP=4297;DP4=2060,1729,18,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.68412e-07;MQSB=6.18843e-09;RPB=0.926657;SGB=-183.244;VDB=0.247847;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.2:10621032 chr02:010621032 0 W/10621032-10621032 FN4229-S SNP T -> C AC=2;AN=170;BQB=0.958348;DP=2408;DP4=1184,1144,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.10696e-14;MQSB=0.915356;RPB=0.999805;SGB=92.2986;VDB=0.71803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.2:10638002 chr02:010638002 0 W/10638002-10638002 FN2689-S SNP A -> C AC=1;AN=200;BQB=0.258984;DP=4441;DP4=2116,2157,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.1148e-08;MQSB=0.973164;RPB=0.985694;SGB=33.0593;VDB=0.189099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttC|L117F|607|LOC_Os02g18320|protein_coding|CODING|LOC_Os02g18320.1|4|1) FN2488.SNP.2:10647068 chr02:010647068 0 W/10647068-10647068 FN2488 SNP A -> G AC=1;AN=200;BQB=0.284147;DP=5669;DP4=2817,2529,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.72593e-07;MQSB=0.955067;RPB=0.913278;SGB=58.8698;VDB=0.00852725;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.2:10650572 chr02:010650572 0 W/10650572-10650572 FN-342 Single Base Substitution T-G INTRON HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2325.SNP.2:10654336 chr02:010654336 0 W/10654336-10654336 FN2325 SNP C -> A AC=1;AN=192;BQB=0.753321;DP=4965;DP4=2481,2191,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.33728e-11;MQSB=0.927153;RPB=0.0241384;SGB=36.607;VDB=0.0807461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.2:10656464 chr02:010656464 0 W/10656464-10656464 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.960511;DP=888;DP4=539,300,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000623317;MQSB=0.992083;RPB=0.976869;SGB=18.2682;VDB=0.0907041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.2:10657964 chr02:010657964 0 W/10657964-10657964 FN1255-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2174-S.SNP.2:10660985 chr02:010660985 0 W/10660985-10660985 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.00173678;DP=4040;DP4=2109,1882,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00940594;MQB=0.00411797;MQSB=2.25536e-07;RPB=0.582897;SGB=-183.337;VDB=0.360777;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S824|1504|LOC_Os02g18340|protein_coding|CODING|LOC_Os02g18340.1|2|1) FN3366-S.SNP.2:10664060 chr02:010664060 0 W/10664060-10664060 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.967561;DP=3700;DP4=1809,1796,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.01002e-13;MQSB=0.979494;RPB=0.98478;SGB=70.9657;VDB=0.215435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.2:10666626 chr02:010666626 0 W/10666626-10666626 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.605753;DP=2601;DP4=1136,1205,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000404792;MQSB=3.76422e-06;RPB=0.363454;SGB=53.2642;VDB=0.742215;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.2:10666698 chr02:010666698 0 W/10666698-10666698 FN896-S Single Base Substitution G-A INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN3971-S.SNP.2:10669401 chr02:010669401 0 W/10669401-10669401 FN3971-S SNP A -> G AC=1;AN=168;BQB=0.880127;DP=2748;DP4=1244,1347,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0160116;MQB=0.092036;MQSB=0.00051307;RPB=0.684271;SGB=17.3231;VDB=0.308259;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.2:10671673 chr02:010671673 0 W/10671673-10671673 FN806-S Single Base Substitution G-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3050-S.SNP.2:10675951 chr02:010675951 0 W/10675951-10675951 FN3050-S SNP C -> A AC=1;AN=184;BQB=0.125315;DP=3630;DP4=1892,1611,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000115006;MQSB=0.965587;RPB=0.496504;SGB=20.7533;VDB=0.448898;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.2:10684270 chr02:010684270 0 W/10684270-10684270 FN2539-S SNP C -> T AC=1;AN=198;BQB=0.946832;DP=3990;DP4=1641,2127,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0576441;MQB=0.817161;MQSB=1.1027e-14;RPB=0.924127;SGB=58.7391;VDB=0.694132;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V965|1462|LOC_Os02g18360|protein_coding|CODING|LOC_Os02g18360.1|5|1) FN2557-S.SNP.2:10686214 chr02:010686214 0 W/10686214-10686214 FN2557-S SNP G -> T AC=1;AN=198;BQB=0.981737;DP=4132;DP4=1955,1953,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.00968054;MQB=0.80912;MQSB=0;RPB=0.615329;SGB=29.3637;VDB=0.323435;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G627|1462|LOC_Os02g18360|protein_coding|CODING|LOC_Os02g18360.1|1|1) FN1072-S.SNP.2:10688442 chr02:010688442 0 W/10688442-10688442 FN1072-S Single Base Substitution T-G INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3429-S.SNP.2:10689286 chr02:010689286 0 W/10689286-10689286 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.962698;DP=3259;DP4=1780,1357,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03964e-08;MQSB=0.92791;RPB=0.809117;SGB=66.8296;VDB=0.68766;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.2:10697770 chr02:010697770 0 W/10697770-10697770 FN689-S Single Base Substitution G-A INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN689-S.SNP.2:10697772 chr02:010697772 0 W/10697772-10697772 FN689-S Single Base Substitution C-A INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1715-S.SNP.2:10702143 chr02:010702143 0 W/10702143-10702143 FN1715-S SNP A -> T AC=2;AN=188;BQB=0.837112;DP=3361;DP4=1866,1434,30,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.4209e-25;MQSB=0.661906;RPB=0.923418;SGB=217.081;VDB=0.897704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.2:10710907 chr02:010710907 0 W/10710907-10710907 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.966494;DP=4701;DP4=2243,2226,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.22547e-11;MQSB=0.998482;RPB=0.975424;SGB=51.0851;VDB=0.646611;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.2:10718357 chr02:010718357 0 W/10718357-10718357 FN-284 Single Base Substitution T-C INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN2092-S.SNP.2:10718451 chr02:010718451 0 W/10718451-10718451 FN2092-S SNP T -> A AC=1;AN=168;BQB=0.0377613;DP=3701;DP4=2172,1493,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.45781e-06;MQSB=0.969047;RPB=0.918646;SGB=-38.3665;VDB=0.791581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.2:10721084 chr02:010721084 0 W/10721084-10721084 FN2150-S SNP T -> C AC=1;AN=168;BQB=0.0439054;DP=3496;DP4=1240,2215,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.50056e-06;MQSB=0.790986;RPB=0.988864;SGB=-15.3725;VDB=0.418473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.2:10724490 chr02:010724490 0 W/10724490-10724490 FN3306-S SNP A -> T AC=1;AN=184;BQB=0.14266;DP=2980;DP4=1534,1338,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000692522;MQSB=0.915925;RPB=0.305405;SGB=35.1773;VDB=0.513454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.2:10726436 chr02:010726436 0 W/10726436-10726436 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.982142;DP=2516;DP4=1059,1389,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.89598e-08;MQSB=0.995165;RPB=0.333876;SGB=58.2031;VDB=0.746499;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A398|497|LOC_Os02g18430|protein_coding|CODING|LOC_Os02g18430.1|2|1) W385-6-8-4.SNP.2:10727334 chr02:010727334 0 W/10727334-10727334 W385-6-8-4 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g18430 AGC_PVPK_like_kin82y.5 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN-174.SNP.2:10732543 chr02:010732543 0 W/10732543-10732543 FN-174 Single Base Substitution G-A INTRON HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2233-S.SNP.2:10738164 chr02:010738164 0 W/10738164-10738164 FN2233-S SNP C -> A AC=2;AN=190;BQB=0.483515;DP=3483;DP4=1669,1580,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.60582e-11;MQSB=0.677536;RPB=0.902522;SGB=75.1932;VDB=0.33337;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.2:10738237 chr02:010738237 0 W/10738237-10738237 FN1516-S Single Base Substitution C-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2640-S.SNP.2:10743652 chr02:010743652 0 W/10743652-10743652 FN2640-S SNP T -> C AC=1;AN=200;BQB=0.912713;DP=5082;DP4=2608,2293,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32087e-11;MQSB=0.972358;RPB=0.387629;SGB=61.9006;VDB=0.222025;EFF=INTRON(MODIFIER||||669|LOC_Os02g18450|protein_coding|CODING|LOC_Os02g18450.1|8|1) FN-325.SNP.2:10749298 chr02:010749298 0 W/10749298-10749298 FN-325 Single Base Substitution T-A INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2146-S.SNP.2:10749657 chr02:010749657 0 W/10749657-10749657 FN2146-S SNP T -> A AC=1;AN=168;BQB=0.006103;DP=3497;DP4=2020,1447,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.92741e-05;MQSB=0.999315;RPB=0.856821;SGB=-37.2282;VDB=0.549895;EFF=INTERGENIC(MODIFIER||||||||||1) FN-109.SNP.2:10750654 chr02:010750654 0 W/10750654-10750654 FN-109 Single Base Substitution G-A INTERGENIC HOMO SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN-12.SNP.2:10756605 chr02:010756605 0 W/10756605-10756605 FN-12 Single Base Substitution C-T INTERGENIC HET SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN2218-S.SNP.2:10757896 chr02:010757896 0 W/10757896-10757896 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.930663;DP=4164;DP4=1368,2555,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.99632e-09;MQSB=0.699919;RPB=0.865043;SGB=46.7622;VDB=0.836636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.2:10760346 chr02:010760346 0 W/10760346-10760346 FN3064-S SNP T -> G AC=1;AN=184;BQB=0.996044;DP=2828;DP4=1475,1251,18,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4251e-14;MQSB=0.947192;RPB=0.973685;SGB=107.526;VDB=0.0465364;EFF=INTRON(MODIFIER||||349|LOC_Os02g18480|protein_coding|CODING|LOC_Os02g18480.1|1|1) FN319-S.SNP.2:10764178 chr02:010764178 0 W/10764178-10764178 FN319-S Single Base Substitution C-T INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN319-S.SNP.2:10764179 chr02:010764179 0 W/10764179-10764179 FN319-S Single Base Substitution C-T INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2115-S.SNP.2:10773599 chr02:010773599 0 W/10773599-10773599 FN2115-S SNP T -> A AC=2;AN=168;BQB=0.0377114;DP=3597;DP4=1718,1814,26,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.31916e-19;MQSB=0.973641;RPB=0.316896;SGB=-291.987;VDB=0.899062;EFF=INTRON(MODIFIER||||135|LOC_Os02g18500|protein_coding|CODING|LOC_Os02g18500.1|1|1) FN3492-S.SNP.2:10774414 chr02:010774414 0 W/10774414-10774414 FN3492-S SNP C -> A AC=1;AN=184;BQB=0.999148;DP=3610;DP4=1614,1880,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.30617e-09;MQSB=0.706043;RPB=0.763998;SGB=46.3132;VDB=0.690061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.2:10778506 chr02:010778506 0 W/10778506-10778506 FN2185-S SNP A -> G AC=1;AN=190;BQB=0.633643;DP=4756;DP4=2284,2161,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.13168e-06;MQSB=1.84282e-05;RPB=0.676189;SGB=39.9877;VDB=0.340495;EFF=INTRON(MODIFIER||||902|LOC_Os02g18510|protein_coding|CODING|LOC_Os02g18510.1|3|1) FN444-S.SNP.2:10779472 chr02:010779472 0 W/10779472-10779472 FN444-S Single Base Substitution A-T INTRON HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3423-S.SNP.2:10779647 chr02:010779647 0 W/10779647-10779647 FN3423-S SNP A -> T AC=2;AN=184;BQB=0.285322;DP=2192;DP4=867,1253,6,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.50598e-05;MQSB=0.999209;RPB=0.358891;SGB=42.7914;VDB=0.626441;EFF=INTRON(MODIFIER||||902|LOC_Os02g18510|protein_coding|CODING|LOC_Os02g18510.1|2|1) FN662-S.SNP.2:10782171 chr02:010782171 0 W/10782171-10782171 FN662-S Single Base Substitution C-T INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN1690-S.SNP.2:10782180 chr02:010782180 0 W/10782180-10782180 FN1690-S SNP T -> C AC=1;AN=188;BQB=0.519926;DP=3230;DP4=1455,1737,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29529e-08;MQSB=0.936685;RPB=0.499329;SGB=-11.74;VDB=0.965163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.2:10790964 chr02:010790964 0 W/10790964-10790964 FN1154-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN-191.SNP.2:10798931 chr02:010798931 0 W/10798931-10798931 FN-191 Single Base Substitution G-C INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN516-S.SNP.2:10799072 chr02:010799072 0 W/10799072-10799072 FN516-S Single Base Substitution C-G INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN-191.SNP.2:10801603 chr02:010801603 0 W/10801603-10801603 FN-191 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os02g18530 expressed protein SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN-191.SNP.2:10803875 chr02:010803875 0 W/10803875-10803875 FN-191 Single Base Substitution G-T INTRON HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN395-S.SNP.2:10806541 chr02:010806541 0 W/10806541-10806541 FN395-S Single Base Substitution G-T INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3467-S.SNP.2:10812740 chr02:010812740 0 W/10812740-10812740 FN3467-S SNP T -> C AC=2;AN=184;BQB=0.824269;DP=3280;DP4=1427,1722,21,32;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.85517e-26;MQSB=0.481268;RPB=0.856854;SGB=228.629;VDB=0.403389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.2:10812792 chr02:010812792 0 W/10812792-10812792 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.972426;DP=3009;DP4=1516,1420,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.08249e-06;MQSB=0.381629;RPB=0.732443;SGB=10.8165;VDB=0.251186;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.2:10821914 chr02:010821914 0 W/10821914-10821914 FN1179-S Single Base Substitution C-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3282-S.SNP.2:10824100 chr02:010824100 0 W/10824100-10824100 FN3282-S SNP T -> A AC=2;AN=184;BQB=0.64118;DP=3012;DP4=1409,1474,21,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31154e-20;MQSB=0.903344;RPB=0.88688;SGB=102.662;VDB=0.0331621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E183V|261|LOC_Os02g18550|protein_coding|CODING|LOC_Os02g18550.1|5|1) FN3282-S.SNP.2:10824101 chr02:010824101 0 W/10824101-10824101 FN3282-S SNP C -> A AC=2;AN=184;BQB=0.950948;DP=3023;DP4=1416,1496,22,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.46733e-20;MQSB=0.894568;RPB=0.935793;SGB=143.7;VDB=0.0521263;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E183*|261|LOC_Os02g18550|protein_coding|CODING|LOC_Os02g18550.1|5|1);LOF=(LOC_Os02g18550|LOC_Os02g18550|1|1.00);NMD=(LOC_Os02g18550|LOC_Os02g18550|1|1.00) FN1118-S.SNP.2:10831772 chr02:010831772 0 W/10831772-10831772 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1424-S.SNP.2:10831972 chr02:010831972 0 W/10831972-10831972 FN1424-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g18570 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN4099-S.SNP.2:10832255 chr02:010832255 0 W/10832255-10832255 FN4099-S SNP T -> C AC=1;AN=182;BQB=0.988618;DP=3256;DP4=1497,1630,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.0012285;MQB=2.49082e-11;MQSB=0.105239;RPB=0.925773;SGB=67.2255;VDB=0.160837;EFF=INTRON(MODIFIER||||299|LOC_Os02g18570|protein_coding|CODING|LOC_Os02g18570.1|2|1) FN1764-S.SNP.2:10839643 chr02:010839643 0 W/10839643-10839643 FN1764-S SNP G -> A AC=1;AN=188;BQB=0.116382;DP=2598;DP4=1446,1121,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.0850654;MQB=0.95961;MQSB=2.02184e-11;RPB=0.959064;SGB=-53.1623;VDB=0.150509;EFF=INTRON(MODIFIER||||685|LOC_Os02g18590|protein_coding|CODING|LOC_Os02g18590.1|7|1) FN-215.SNP.2:10844067 chr02:010844067 0 W/10844067-10844067 FN-215 Single Base Substitution C-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN4114-S.SNP.2:10845189 chr02:010845189 0 W/10845189-10845189 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.962187;DP=2552;DP4=1191,1293,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.94276e-06;MQSB=0.998804;RPB=0.91794;SGB=35.0899;VDB=0.148759;EFF=INTERGENIC(MODIFIER||||||||||1) 702-7.SNP.2:10846006 chr02:010846006 0 W/10846006-10846006 702-7 Single Base Substitution G-C INTERGENIC Homo SNo: 1448, Mutant_ID: 702-7, Generation: M2, Mutations: 31, Genes: 27, Seed availability: Yes. FN2556-S.SNP.2:10865818 chr02:010865818 0 W/10865818-10865818 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.76504;DP=4556;DP4=2283,2045,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000219491;MQB=2.60723e-10;MQSB=0.818354;RPB=0.844043;SGB=-13.2407;VDB=0.77062;EFF=INTRON(MODIFIER||||554|LOC_Os02g18650|protein_coding|CODING|LOC_Os02g18650.1|1|1) FN493-S.SNP.2:10865860 chr02:010865860 0 W/10865860-10865860 FN493-S Single Base Substitution T-A INTRON HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN493-S.SNP.2:10865861 chr02:010865861 0 W/10865861-10865861 FN493-S Single Base Substitution G-A INTRON HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN786-S.SNP.2:10867285 chr02:010867285 0 W/10867285-10867285 FN786-S Single Base Substitution A-G INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2304.SNP.2:10871050 chr02:010871050 0 W/10871050-10871050 FN2304 SNP G -> A AC=1;AN=192;BQB=0.85235;DP=4356;DP4=1789,2318,20,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000229568;MQB=2.61179e-19;MQSB=0.819899;RPB=0.256792;SGB=128.889;VDB=0.950515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G223S|578|LOC_Os02g18660|protein_coding|CODING|LOC_Os02g18660.1|1|1) FN2698-S.SNP.2:10877203 chr02:010877203 0 W/10877203-10877203 FN2698-S SNP T -> G AC=1;AN=200;BQB=0.0283105;DP=4619;DP4=2370,2057,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01853e-07;MQSB=0.693976;RPB=0.657854;SGB=11.0951;VDB=0.689878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.2:10879791 chr02:010879791 0 W/10879791-10879791 FN3294-S SNP G -> A AC=2;AN=184;BQB=0.731532;DP=2208;DP4=1303,766,14,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000452899;MQB=1.54323e-07;MQSB=0.716513;RPB=0.0868232;SGB=80.3949;VDB=0.579875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.2:10880102 chr02:010880102 0 W/10880102-10880102 FN2637-S SNP G -> T AC=2;AN=200;BQB=0.95459;DP=3660;DP4=2210,1233,22,13;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=3.68721e-13;MQSB=0.014557;RPB=0.966265;SGB=155.578;VDB=0.141887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.2:10884143 chr02:010884143 0 W/10884143-10884143 FN1728-S SNP T -> G AC=2;AN=188;BQB=0.994924;DP=3812;DP4=1856,1904,15,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.53545e-22;MQSB=0.97396;RPB=0.66747;SGB=39.4907;VDB=0.804739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tCt|Y542S|1186|LOC_Os02g18670|protein_coding|CODING|LOC_Os02g18670.1|3|1) FN3849-S.SNP.2:10887083 chr02:010887083 0 W/10887083-10887083 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.870621;DP=2441;DP4=1208,1134,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.61308e-08;MQSB=0.936066;RPB=0.0944366;SGB=16.7104;VDB=0.0718255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.2:10891598 chr02:010891598 0 W/10891598-10891598 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.763096;DP=4977;DP4=2373,2373,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64928e-13;MQSB=0.993466;RPB=0.963231;SGB=65.5058;VDB=0.981592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.2:10891842 chr02:010891842 0 W/10891842-10891842 FN2670-S SNP C -> A AC=2;AN=200;BQB=0.568951;DP=4743;DP4=2230,2284,33,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.30138e-36;MQSB=0.992092;RPB=0.706806;SGB=138.902;VDB=0.30521;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.2:10902876 chr02:010902876 0 W/10902876-10902876 FN1516-S Single Base Substitution C-G INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN4020-S.SNP.2:10905833 chr02:010905833 0 W/10905833-10905833 FN4020-S SNP G -> C AC=2;AN=168;BQB=0.579117;DP=1477;DP4=886,519,13,7;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.0013541;MQB=8.08236e-05;MQSB=2.67799e-05;RPB=0.96602;SGB=83.1885;VDB=0.266887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.2:10913190 chr02:010913190 0 W/10913190-10913190 FN2161-S SNP T -> C AC=1;AN=168;BQB=0.0987363;DP=3982;DP4=1929,2013,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.58313e-09;MQSB=9.52328e-25;RPB=0.63217;SGB=14.2064;VDB=0.291935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R594G|1198|LOC_Os02g18700|protein_coding|CODING|LOC_Os02g18700.1|3|1) FN2719-S.SNP.2:10921848 chr02:010921848 0 W/10921848-10921848 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.290005;DP=2194;DP4=1898,162,12,0;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25819e-07;MQSB=0.650678;RPB=0.745583;SGB=33.0593;VDB=0.271473;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.2:10925191 chr02:010925191 0 W/10925191-10925191 FN2267-S SNP T -> A AC=2;AN=190;BQB=0.326013;DP=3976;DP4=1741,1580,23,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.50826e-13;MQSB=0.953962;RPB=0.00183969;SGB=-166;VDB=0.133743;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.2:10927418 chr02:010927418 0 W/10927418-10927418 FN4046-S SNP G -> A AC=1;AN=168;BQB=0.768357;DP=2324;DP4=1066,1166,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000430293;MQB=0.00011762;MQSB=7.16201e-09;RPB=0.587915;SGB=43.3113;VDB=0.571148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S620N|1039|LOC_Os02g18730|protein_coding|CODING|LOC_Os02g18730.1|5|1) FN2561-S.SNP.2:10933013 chr02:010933013 0 W/10933013-10933013 FN2561-S SNP C -> A AC=1;AN=198;BQB=0.777789;DP=4654;DP4=2261,2077,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.93035e-06;MQSB=0.998421;RPB=0.987985;SGB=49.5489;VDB=0.320291;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.2:10946798 chr02:010946798 0 W/10946798-10946798 FN4104-S SNP C -> T AC=2;AN=182;BQB=0.917797;DP=2707;DP4=1381,1239,13,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.00256e-10;MQSB=0.0532284;RPB=0.716329;SGB=102.753;VDB=0.830287;EFF=INTRON(MODIFIER||||168|LOC_Os02g18780|protein_coding|CODING|LOC_Os02g18780.1|2|1) FN2768-S.SNP.2:10946877 chr02:010946877 0 W/10946877-10946877 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.29478;DP=3364;DP4=1898,1157,15,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000297265;MQB=7.6531e-08;MQSB=7.7574e-11;RPB=0.982779;SGB=-11.4553;VDB=0.30539;EFF=INTRON(MODIFIER||||168|LOC_Os02g18780|protein_coding|CODING|LOC_Os02g18780.1|2|1) FN2480.SNP.2:10948184 chr02:010948184 0 W/10948184-10948184 FN2480 SNP G -> A AC=1;AN=200;BQB=0.952704;DP=3819;DP4=1716,1787,2,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.81031e-05;MQSB=0.592156;RPB=0.991919;SGB=25.849;VDB=0.273746;EFF=UTR_5_PRIME(MODIFIER||16||98|LOC_Os02g18784|protein_coding|CODING|LOC_Os02g18784.1|1|1) FN2495.SNP.2:10957520 chr02:010957520 0 W/10957520-10957520 FN2495 SNP G -> A AC=1;AN=200;BQB=0.100306;DP=4309;DP4=1992,2032,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.51029e-14;MQSB=0.946774;RPB=0.657825;SGB=-95.2797;VDB=0.847001;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.2:10959724 chr02:010959724 0 W/10959724-10959724 FN453-S Single Base Substitution G-A INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3766-S.SNP.2:10961459 chr02:010961459 0 W/10961459-10961459 FN3766-S SNP A -> T AC=1;AN=190;BQB=0.974322;DP=2239;DP4=999,1151,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00037e-08;MQSB=0.684518;RPB=0.999053;SGB=67.3108;VDB=0.878284;EFF=INTRON(MODIFIER||||930|LOC_Os02g18810|protein_coding|CODING|LOC_Os02g18810.1|1|1),INTRON(MODIFIER||||233|LOC_Os02g18810|protein_coding|CODING|LOC_Os02g18810.2|1|1) FN2275-S.SNP.2:10980386 chr02:010980386 0 W/10980386-10980386 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.79127;DP=4860;DP4=2287,2281,26,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.10988e-23;MQSB=0.997249;RPB=0.233323;SGB=4.50208;VDB=0.00115855;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S329F|786|LOC_Os02g18820|protein_coding|CODING|LOC_Os02g18820.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S329F|786|LOC_Os02g18820|protein_coding|CODING|LOC_Os02g18820.2|9|1) FN4176-S.SNP.2:10995666 chr02:010995666 0 W/10995666-10995666 FN4176-S SNP C -> T AC=1;AN=170;BQB=0.934264;DP=2446;DP4=1190,1185,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01763e-09;MQSB=0.986674;RPB=0.807448;SGB=61.2001;VDB=0.843828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A326T|565|LOC_Os02g18840|protein_coding|CODING|LOC_Os02g18840.1|4|1) FN2206-S.SNP.2:11001413 chr02:011001413 0 W/11001413-11001413 FN2206-S SNP T -> A AC=1;AN=190;BQB=0.911502;DP=4865;DP4=2186,2440,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.68368e-09;MQSB=0.675224;RPB=0.990514;SGB=39.6545;VDB=0.992865;EFF=INTRON(MODIFIER||||596|LOC_Os02g18850|protein_coding|CODING|LOC_Os02g18850.1|4|1) FN1335-S.SNP.2:11007286 chr02:011007286 0 W/11007286-11007286 FN1335-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3914-S.SNP.2:11016253 chr02:011016253 0 W/11016253-11016253 FN3914-S SNP T -> A AC=1;AN=158;BQB=0.947737;DP=2410;DP4=1078,1250,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00059773;MQSB=0.991308;RPB=0.710489;SGB=33.9591;VDB=0.221242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N138I|213|LOC_Os02g18880|protein_coding|CODING|LOC_Os02g18880.1|6|1) FN2545-S.SNP.2:11020083 chr02:011020083 0 W/11020083-11020083 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.528089;DP=4446;DP4=2167,2032,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10714e-07;MQSB=0.973791;RPB=0.750468;SGB=44.9538;VDB=0.219224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.2:11024664 chr02:011024664 0 W/11024664-11024664 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN505-S.SNP.2:11027866 chr02:011027866 0 W/11027866-11027866 FN505-S Single Base Substitution C-T INTRON HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.2:11027868 chr02:011027868 0 W/11027868-11027868 FN505-S Single Base Substitution C-T INTRON HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2595-S.SNP.2:11034087 chr02:011034087 0 W/11034087-11034087 FN2595-S SNP A -> T AC=1;AN=198;BQB=0.803313;DP=3827;DP4=2057,1644,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0898876;MQB=0.870306;MQSB=6.3776e-28;RPB=0.92522;SGB=72.5245;VDB=0.969041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S691T|1555|LOC_Os02g18900|protein_coding|CODING|LOC_Os02g18900.1|4|1) FN1015-S.SNP.2:11039441 chr02:011039441 0 W/11039441-11039441 FN1015-S Single Base Substitution A-G INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1568-S.SNP.2:11041086 chr02:011041086 0 W/11041086-11041086 FN1568-S Single Base Substitution A-T INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN462-S.SNP.2:11059187 chr02:011059187 0 W/11059187-11059187 FN462-S Single Base Substitution G-C INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN810-S.SNP.2:11063021 chr02:011063021 0 W/11063021-11063021 FN810-S Single Base Substitution T-A INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1423-S.SNP.2:11066022 chr02:011066022 0 W/11066022-11066022 FN1423-S Single Base Substitution G-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3779-S.SNP.2:11072068 chr02:011072068 0 W/11072068-11072068 FN3779-S SNP A -> T AC=1;AN=190;BQB=0.966175;DP=2809;DP4=1219,1477,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.1758e-14;MQSB=0.851337;RPB=0.255932;SGB=71.6393;VDB=0.537902;EFF=INTRON(MODIFIER||||375|LOC_Os02g18954|protein_coding|CODING|LOC_Os02g18954.1|1|1) FN2374.SNP.2:11074145 chr02:011074145 0 W/11074145-11074145 FN2374 SNP C -> T AC=1;AN=192;BQB=0.358502;DP=5187;DP4=2631,2330,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.22141e-06;MQSB=0.437277;RPB=0.997679;SGB=1.09742;VDB=0.914306;EFF=INTRON(MODIFIER||||375|LOC_Os02g18954|protein_coding|CODING|LOC_Os02g18954.1|3|1) FN924-S.SNP.2:11077561 chr02:011077561 0 W/11077561-11077561 FN924-S Single Base Substitution T-C INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3600-S.SNP.2:11086953 chr02:011086953 0 W/11086953-11086953 FN3600-S SNP G -> C AC=2;AN=190;BQB=0.639732;DP=2592;DP4=1070,1379,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.56653e-12;MQSB=0.839858;RPB=0.998355;SGB=22.7576;VDB=0.420352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.2:11090872 chr02:011090872 0 W/11090872-11090872 FN-105 Single Base Substitution C-T INTRON HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2426.SNP.2:11098103 chr02:011098103 0 W/11098103-11098103 FN2426 SNP T -> C AC=1;AN=200;BQB=0.866796;DP=4866;DP4=2256,2122,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49097e-08;MQSB=0.547331;RPB=0.339588;SGB=4.67442;VDB=0.161376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.2:11099418 chr02:011099418 0 W/11099418-11099418 FN2535-S SNP G -> A AC=1;AN=198;BQB=0.95723;DP=3950;DP4=1957,1800,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00177215;MQB=0.249882;MQSB=0.0240002;RPB=0.823392;SGB=58.1246;VDB=0.668609;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.2:11099881 chr02:011099881 0 W/11099881-11099881 FN2535-S SNP A -> T AC=1;AN=198;BQB=0.603172;DP=4349;DP4=2068,2051,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66408e-10;MQSB=0.998726;RPB=0.884167;SGB=72.5245;VDB=0.0148581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.2:11103495 chr02:011103495 0 W/11103495-11103495 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.891246;DP=3378;DP4=1585,1537,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000514283;MQSB=0.0677715;RPB=0.905073;SGB=35.4339;VDB=0.646518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.2:11110218 chr02:011110218 0 W/11110218-11110218 FN2631-S SNP G -> C AC=1;AN=200;BQB=0.826125;DP=4914;DP4=2190,2471,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06112e-12;MQSB=0.402863;RPB=0.970901;SGB=65.5058;VDB=0.830962;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.2:11116893 chr02:011116893 0 W/11116893-11116893 FN3905-S SNP T -> C AC=2;AN=158;BQB=0.853801;DP=2287;DP4=1094,1100,16,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.0148e-11;MQSB=0.652405;RPB=0.94131;SGB=35.6659;VDB=0.918279;EFF=INTRON(MODIFIER||||409|LOC_Os02g19040|protein_coding|CODING|LOC_Os02g19040.1|1|1) FN2373.SNP.2:11119345 chr02:011119345 0 W/11119345-11119345 FN2373 SNP G -> C AC=2;AN=192;BQB=0.932651;DP=4838;DP4=2192,2313,32,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.07695e-28;MQSB=0.622345;RPB=0.99536;SGB=131.488;VDB=0.340784;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G204A|409|LOC_Os02g19040|protein_coding|CODING|LOC_Os02g19040.1|4|1) FN_398-3-4-5.SNP.2:11122352 chr02:011122352 0 W/11122352-11122352 FN_398-3-4-5 Single Base Substitution G-A INTERGENIC HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN2298.SNP.2:11124163 chr02:011124163 0 W/11124163-11124163 FN2298 SNP C -> T AC=1;AN=192;BQB=0.98622;DP=4974;DP4=2541,2178,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000201045;MQB=6.59084e-14;MQSB=0.967494;RPB=0.619112;SGB=89.6809;VDB=0.879716;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.2:11124936 chr02:011124936 0 W/11124936-11124936 FN1008-S Single Base Substitution G-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN_N2-29a-1.SNP.2:11126458 chr02:011126458 0 W/11126458-11126458 FN_N2-29a-1 Single Base Substitution T-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2645-S.SNP.2:11127627 chr02:011127627 0 W/11127627-11127627 FN2645-S SNP C -> G AC=1;AN=200;BQB=0.220293;DP=4466;DP4=2006,2101,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85209e-09;MQSB=0.888439;RPB=0.757037;SGB=60.747;VDB=0.516209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.2:11127983 chr02:011127983 0 W/11127983-11127983 FN2345 SNP T -> A AC=1;AN=192;BQB=0.354079;DP=4393;DP4=2346,1631,24,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.3616e-11;MQSB=1.21105e-05;RPB=0.899482;SGB=26.127;VDB=0.387958;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.2:11129866 chr02:011129866 0 W/11129866-11129866 FN224-S Single Base Substitution G-A INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN2380.SNP.2:11135568 chr02:011135568 0 W/11135568-11135568 FN2380 SNP A -> T AC=1;AN=192;BQB=0.380831;DP=4757;DP4=2215,2226,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000210217;MQB=4.76925e-08;MQSB=0.775708;RPB=0.825845;SGB=53.7748;VDB=0.45831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.2:11136955 chr02:011136955 0 W/11136955-11136955 FN2529-S SNP C -> T AC=1;AN=198;BQB=0.33042;DP=3605;DP4=1683,1725,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.5172e-06;MQSB=0.980311;RPB=0.798204;SGB=49.5489;VDB=0.134895;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R60|385|LOC_Os02g19080|protein_coding|CODING|LOC_Os02g19080.1|2|1) FN2629-S.SNP.2:11137693 chr02:011137693 0 W/11137693-11137693 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.983388;DP=4504;DP4=2157,2075,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16149e-14;MQSB=0.987654;RPB=0.977232;SGB=79.9264;VDB=0.430486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R253C|385|LOC_Os02g19080|protein_coding|CODING|LOC_Os02g19080.1|3|1) FN734-S.SNP.2:11137977 chr02:011137977 0 W/11137977-11137977 FN734-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN373-S.SNP.2:11141588 chr02:011141588 0 W/11141588-11141588 FN373-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g19090 retrotransposon protein, putative, unclassified, expressed SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1464-S.SNP.2:11142538 chr02:011142538 0 W/11142538-11142538 FN1464-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g19100 retrotransposon protein, putative, unclassified, expressed SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN579-S.SNP.2:11144247 chr02:011144247 0 W/11144247-11144247 FN579-S Single Base Substitution G-A INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1335-S.SNP.2:11147685 chr02:011147685 0 W/11147685-11147685 FN1335-S Single Base Substitution C-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3545-S.SNP.2:11152182 chr02:011152182 0 W/11152182-11152182 FN3545-S SNP T -> G AC=2;AN=188;BQB=0.961355;DP=3175;DP4=1684,1391,19,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.46872e-22;MQSB=0.860187;RPB=0.996681;SGB=167.105;VDB=0.0225778;EFF=INTRON(MODIFIER||||628|LOC_Os02g19130|protein_coding|CODING|LOC_Os02g19130.1|1|1) FN1275-S.SNP.2:11156012 chr02:011156012 0 W/11156012-11156012 FN1275-S Single Base Substitution T-A INTRON HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2197-S.SNP.2:11158197 chr02:011158197 0 W/11158197-11158197 FN2197-S SNP G -> T AC=1;AN=190;BQB=0.883174;DP=4706;DP4=2280,2201,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.82646e-06;MQSB=0.748681;RPB=0.843379;SGB=25.439;VDB=0.193383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H164N|349|LOC_Os02g19140|protein_coding|CODING|LOC_Os02g19140.1|2|1) FN3555-S.SNP.2:11167251 chr02:011167251 0 W/11167251-11167251 FN3555-S SNP T -> A AC=1;AN=188;BQB=0.538468;DP=2640;DP4=1209,1378,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20694e-07;MQSB=0.996612;RPB=0.997769;SGB=71.6954;VDB=0.792627;EFF=INTRON(MODIFIER||||567|LOC_Os02g19150|protein_coding|CODING|LOC_Os02g19150.1|7|1) FN1384-S.SNP.2:11172287 chr02:011172287 0 W/11172287-11172287 FN1384-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN984-S.SNP.2:11172787 chr02:011172787 0 W/11172787-11172787 FN984-S Single Base Substitution G-A INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1026-S.SNP.2:11173006 chr02:011173006 0 W/11173006-11173006 FN1026-S Single Base Substitution A-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN4082-S.SNP.2:11185876 chr02:011185876 0 W/11185876-11185876 FN4082-S SNP A -> C AC=1;AN=182;BQB=0.65025;DP=3018;DP4=1477,1428,9,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.8561e-16;MQSB=0.844237;RPB=0.925549;SGB=102.753;VDB=0.52706;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.2:11185880 chr02:011185880 0 W/11185880-11185880 FN4082-S SNP T -> A AC=1;AN=182;BQB=0.965135;DP=3016;DP4=1446,1359,10,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.31266e-14;MQSB=0.838517;RPB=0.988593;SGB=-9.7363;VDB=0.651154;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.2:11189631 chr02:011189631 0 W/11189631-11189631 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.872307;DP=3553;DP4=1849,1661,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.18781e-12;MQSB=0.998397;RPB=0.591788;SGB=-11.926;VDB=0.348632;EFF=UTR_3_PRIME(MODIFIER||2873||423|LOC_Os02g19200|protein_coding|CODING|LOC_Os02g19200.1|1|1) FN1395-S.SNP.2:11196404 chr02:011196404 0 W/11196404-11196404 FN1395-S Single Base Substitution T-A INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN4135-S.SNP.2:11197185 chr02:011197185 0 W/11197185-11197185 FN4135-S SNP G -> T AC=1;AN=182;BQB=0.970323;DP=2993;DP4=1534,1336,8,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.89889e-12;MQSB=0.893977;RPB=0.825669;SGB=63.7146;VDB=0.851084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.2:11214790 chr02:011214790 0 W/11214790-11214790 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.703697;DP=5065;DP4=2629,2153,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.46851e-15;MQSB=0.950355;RPB=0.977796;SGB=23.9365;VDB=0.657676;EFF=INTRON(MODIFIER||||830|LOC_Os02g19220|protein_coding|CODING|LOC_Os02g19220.1|2|1),INTRON(MODIFIER||||830|LOC_Os02g19220|protein_coding|CODING|LOC_Os02g19220.2|2|1) FN2327.SNP.2:11225913 chr02:011225913 0 W/11225913-11225913 FN2327 SNP A -> G AC=2;AN=192;BQB=0.925836;DP=4599;DP4=2270,1897,13,15;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=4.06859e-11;MQSB=1.67457e-11;RPB=0.259368;SGB=122.24;VDB=0.210442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.2:11228268 chr02:011228268 0 W/11228268-11228268 FN2260-S SNP T -> C AC=1;AN=190;BQB=0.929531;DP=4387;DP4=1780,2103,10,18;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.69863e-11;MQSB=0.000473348;RPB=0.958119;SGB=-8.23709;VDB=0.50152;EFF=INTRON(MODIFIER||||445|LOC_Os02g19250|protein_coding|CODING|LOC_Os02g19250.1|1|1) FN2611-S.SNP.2:11228670 chr02:011228670 0 W/11228670-11228670 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.221529;DP=4696;DP4=2229,2206,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.17175e-16;MQSB=0.999843;RPB=0.457219;SGB=23.9365;VDB=0.397565;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F159|445|LOC_Os02g19250|protein_coding|CODING|LOC_Os02g19250.1|2|1) FN4185-S.SNP.2:11236547 chr02:011236547 0 W/11236547-11236547 FN4185-S SNP C -> G AC=2;AN=170;BQB=0.923544;DP=2191;DP4=1171,975,7,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.58947e-07;MQSB=0.877089;RPB=0.971241;SGB=47.8722;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.2:11243484 chr02:011243484 0 W/11243484-11243484 FN4130-S SNP G -> A AC=1;AN=182;BQB=0.953604;DP=2402;DP4=1217,931,13,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.08201e-10;MQSB=0.890752;RPB=0.544843;SGB=80.1982;VDB=0.792041;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.2:11249621 chr02:011249621 0 W/11249621-11249621 FN454-S Single Base Substitution C-T INTERGENIC HOMO SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN672-S.SNP.2:11256150 chr02:011256150 0 W/11256150-11256150 FN672-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g19270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN4253-S.SNP.2:11256897 chr02:011256897 0 W/11256897-11256897 FN4253-S SNP T -> A AC=1;AN=170;BQB=0.616677;DP=2423;DP4=1177,1181,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000825423;MQB=3.11106e-07;MQSB=0.998472;RPB=0.42017;SGB=41.7633;VDB=0.652362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V566D|1235|LOC_Os02g19270|protein_coding|CODING|LOC_Os02g19270.1|2|1) FN-344.SNP.2:11259620 chr02:011259620 0 W/11259620-11259620 FN-344 Single Base Substitution T-A INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN857-S.SNP.2:11261462 chr02:011261462 0 W/11261462-11261462 FN857-S Single Base Substitution A-T INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2219-S.SNP.2:11270492 chr02:011270492 0 W/11270492-11270492 FN2219-S SNP T -> C AC=1;AN=190;BQB=0.370824;DP=5075;DP4=2218,2545,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55361e-13;MQSB=0.998702;RPB=0.462984;SGB=-9.89872;VDB=0.87424;EFF=INTRON(MODIFIER||||1394|LOC_Os02g19280|protein_coding|CODING|LOC_Os02g19280.1|7|1) FN2219-S.SNP.2:11270502 chr02:011270502 0 W/11270502-11270502 FN2219-S SNP A -> T AC=1;AN=190;BQB=0.915426;DP=5078;DP4=2322,2446,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.22697e-15;MQSB=0.8771;RPB=0.879434;SGB=71.6393;VDB=0.84254;EFF=INTRON(MODIFIER||||1394|LOC_Os02g19280|protein_coding|CODING|LOC_Os02g19280.1|7|1) FN2344.SNP.2:11277000 chr02:011277000 0 W/11277000-11277000 FN2344 SNP C -> T AC=1;AN=192;BQB=0.271143;DP=4706;DP4=2148,2354,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.44834e-07;MQSB=0.999628;RPB=0.649506;SGB=32.6514;VDB=0.186377;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y136|1898|LOC_Os02g19300|protein_coding|CODING|LOC_Os02g19300.1|1|1) FN4189-S.SNP.2:11285563 chr02:011285563 0 W/11285563-11285563 FN4189-S SNP G -> A AC=2;AN=170;BQB=0.793941;DP=2626;DP4=1456,1096,13,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.38549e-12;MQSB=0.994555;RPB=0.969678;SGB=78.9707;VDB=0.47151;EFF=INTRON(MODIFIER||||852|LOC_Os02g19310|protein_coding|CODING|LOC_Os02g19310.1|3|1) FN3538-S.SNP.2:11287329 chr02:011287329 0 W/11287329-11287329 FN3538-S SNP T -> A AC=1;AN=188;BQB=0.97239;DP=2947;DP4=1507,1367,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.25431e-08;MQSB=0.937465;RPB=0.993715;SGB=39.5276;VDB=0.303442;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctT|L81|852|LOC_Os02g19310|protein_coding|CODING|LOC_Os02g19310.1|2|1) FN2160-S.SNP.2:11290643 chr02:011290643 0 W/11290643-11290643 FN2160-S SNP C -> G AC=2;AN=168;BQB=0.542603;DP=3180;DP4=1459,1677,15,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.41406e-14;MQSB=0.996885;RPB=0.960103;SGB=-9.34108;VDB=0.162192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.2:11291697 chr02:011291697 0 W/11291697-11291697 FN1746-S SNP C -> T AC=1;AN=188;BQB=0.398833;DP=3346;DP4=2000,1313,16,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.02201e-10;MQSB=0.975125;RPB=0.377569;SGB=-131.719;VDB=0.537442;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.2:11293172 chr02:011293172 0 W/11293172-11293172 FN_815-4-1 Single Base Substitution T-C Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3378-S.SNP.2:11298817 chr02:011298817 0 W/11298817-11298817 FN3378-S SNP A -> T AC=1;AN=184;BQB=0.953282;DP=2842;DP4=1395,1344,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.40013e-07;MQSB=0.997997;RPB=0.0974508;SGB=39.699;VDB=0.022095;EFF=INTRON(MODIFIER||||830|LOC_Os02g19330|protein_coding|CODING|LOC_Os02g19330.1|2|1),INTRON(MODIFIER||||830|LOC_Os02g19330|protein_coding|CODING|LOC_Os02g19330.2|2|1) FN3378-S.SNP.2:11298818 chr02:011298818 0 W/11298818-11298818 FN3378-S SNP G -> T AC=1;AN=184;BQB=0.987261;DP=2825;DP4=1387,1348,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.9662e-08;MQSB=0.989966;RPB=0.040988;SGB=15.7097;VDB=0.0100903;EFF=INTRON(MODIFIER||||830|LOC_Os02g19330|protein_coding|CODING|LOC_Os02g19330.1|2|1),INTRON(MODIFIER||||830|LOC_Os02g19330|protein_coding|CODING|LOC_Os02g19330.2|2|1) FN1262-S.SNP.2:11313534 chr02:011313534 0 W/11313534-11313534 FN1262-S Single Base Substitution G-T INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN895-S.SNP.2:11315867 chr02:011315867 0 W/11315867-11315867 FN895-S Single Base Substitution T-C INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3866-S.SNP.2:11321521 chr02:011321521 0 W/11321521-11321521 FN3866-S SNP C -> G AC=1;AN=158;BQB=0.974087;DP=2248;DP4=1164,1011,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.44382e-07;MQSB=0.929725;RPB=0.99673;SGB=42.6978;VDB=0.935526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.2:11322160 chr02:011322160 0 W/11322160-11322160 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.462831;DP=4186;DP4=2139,1705,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.59694e-07;MQSB=0.89646;RPB=0.758595;SGB=-14.3297;VDB=0.522;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.2:11323901 chr02:011323901 0 W/11323901-11323901 FN712-S Single Base Substitution G-A INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2296.SNP.2:11325149 chr02:011325149 0 W/11325149-11325149 FN2296 SNP G -> C AC=1;AN=192;BQB=0.482408;DP=5114;DP4=2409,2396,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000195542;MQB=4.41576e-11;MQSB=0.991357;RPB=0.131701;SGB=22.9983;VDB=0.528635;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.2:11326622 chr02:011326622 0 W/11326622-11326622 FN-233 Single Base Substitution G-A INTERGENIC HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN_788-1-1.SNP.2:11328001 chr02:011328001 0 W/11328001-11328001 FN_788-1-1 Single Base Substitution G-A HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN3718-S.SNP.2:11328073 chr02:011328073 0 W/11328073-11328073 FN3718-S SNP C -> T AC=2;AN=190;BQB=0.792769;DP=2598;DP4=1200,1285,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.10935e-09;MQSB=0.812288;RPB=0.170449;SGB=50.3161;VDB=0.0165977;EFF=INTRON(MODIFIER||||506|LOC_Os02g19390|protein_coding|CODING|LOC_Os02g19390.1|2|1) FN2782-S.SNP.2:11330899 chr02:011330899 0 W/11330899-11330899 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.0264774;DP=4073;DP4=1953,1929,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.64914e-09;MQSB=0.999658;RPB=0.959586;SGB=31.9395;VDB=0.966028;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R623|965|LOC_Os02g19400|protein_coding|CODING|LOC_Os02g19400.1|5|1) FN3452-S.SNP.2:11331998 chr02:011331998 0 W/11331998-11331998 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.94719;DP=4521;DP4=1990,2385,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33618e-10;MQSB=0.985596;RPB=0.337736;SGB=84.9167;VDB=0.603687;EFF=INTRON(MODIFIER||||965|LOC_Os02g19400|protein_coding|CODING|LOC_Os02g19400.1|2|1) FN-186.SNP.2:11336500 chr02:011336500 0 W/11336500-11336500 FN-186 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1731-S.SNP.2:11337626 chr02:011337626 0 W/11337626-11337626 FN1731-S SNP G -> C AC=2;AN=188;BQB=0.316716;DP=1751;DP4=837,841,11,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.61376e-08;MQSB=0.91281;RPB=0.841062;SGB=31.1628;VDB=0.807779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A28G|431|LOC_Os02g19410|protein_coding|CODING|LOC_Os02g19410.1|1|1) FN1761-S.SNP.2:11338698 chr02:011338698 0 W/11338698-11338698 FN1761-S SNP G -> C AC=2;AN=188;BQB=0.208783;DP=1911;DP4=491,1383,5,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.36383e-07;MQSB=0.999429;RPB=0.404275;SGB=33.7061;VDB=0.874435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.2:11343065 chr02:011343065 0 W/11343065-11343065 FN1072-S Single Base Substitution T-C INTRON HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2329.SNP.2:11354687 chr02:011354687 0 W/11354687-11354687 FN2329 SNP A -> G AC=1;AN=192;BQB=0.991793;DP=5157;DP4=2405,2539,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.44411e-09;MQSB=0.754466;RPB=0.999966;SGB=39.1713;VDB=0.914494;EFF=UTR_5_PRIME(MODIFIER||21||123|LOC_Os02g19440|protein_coding|CODING|LOC_Os02g19440.2|3|1),INTRON(MODIFIER||||212|LOC_Os02g19440|protein_coding|CODING|LOC_Os02g19440.1|4|1),INTRON(MODIFIER||||118|LOC_Os02g19440|protein_coding|CODING|LOC_Os02g19440.3|3|1) FN3476-S.SNP.2:11359731 chr02:011359731 0 W/11359731-11359731 FN3476-S SNP T -> C AC=1;AN=184;BQB=0.786448;DP=2696;DP4=1308,1328,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.63822e-05;MQSB=0.625174;RPB=0.8132;SGB=62.3078;VDB=0.753481;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.2:11361530 chr02:011361530 0 W/11361530-11361530 FN748-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g19450 ATPase, AAA family protein, expressed SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN506-S.SNP.2:11367794 chr02:011367794 0 W/11367794-11367794 FN506-S Single Base Substitution T-A INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN3577-S.SNP.2:11369858 chr02:011369858 0 W/11369858-11369858 FN3577-S SNP G -> A AC=2;AN=188;BQB=0.931684;DP=3236;DP4=1614,1518,21,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.01713e-21;MQSB=0.999877;RPB=0.765092;SGB=142.283;VDB=0.638099;EFF=INTRON(MODIFIER||||296|LOC_Os02g19460|protein_coding|CODING|LOC_Os02g19460.1|2|1) FN3750-S.SNP.2:11370931 chr02:011370931 0 W/11370931-11370931 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.91912;DP=2611;DP4=1230,1259,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57225e-11;MQSB=0.8038;RPB=0.303825;SGB=68.0854;VDB=0.170256;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.2:11371016 chr02:011371016 0 W/11371016-11371016 FN-196 Single Base Substitution G-A INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1336-S.SNP.2:11374827 chr02:011374827 0 W/11374827-11374827 FN1336-S Single Base Substitution C-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2313.SNP.2:11376483 chr02:011376483 0 W/11376483-11376483 FN2313 SNP A -> G AC=1;AN=192;BQB=0.443956;DP=5157;DP4=2382,2525,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.88088e-06;MQSB=0.857484;RPB=0.991884;SGB=29.087;VDB=0.466016;EFF=INTERGENIC(MODIFIER||||||||||1) FN-15.SNP.2:11378415 chr02:011378415 0 W/11378415-11378415 FN-15 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os02g19470 expressed protein SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN4188-S.SNP.2:11380350 chr02:011380350 0 W/11380350-11380350 FN4188-S SNP C -> T AC=2;AN=170;BQB=0.999682;DP=2345;DP4=1202,1027,17,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.74563e-17;MQSB=0.739945;RPB=0.965994;SGB=93.4031;VDB=0.900941;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN-299 Single Base Substitution C-T INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-315.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN-315 Single Base Substitution C-T INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN-387 Single Base Substitution C-T INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1089-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN1089-S Single Base Substitution C-T INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1339-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN1339-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2120-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN2120-S SNP C -> T AC=1;AN=168;BQB=0.761934;DP=2916;DP4=1141,1710,14,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.53113e-12;MQSB=0.861342;RPB=0.628368;SGB=-128.892;VDB=0.570595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN2298 SNP C -> T AC=1;AN=192;BQB=0.548556;DP=4629;DP4=2116,2176,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.40292e-10;MQSB=0.855372;RPB=0.775384;SGB=36.607;VDB=0.604286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN2658-S SNP C -> T AC=2;AN=200;BQB=0.994937;DP=4445;DP4=2072,2089,31,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.86271e-29;MQSB=0.935041;RPB=0.932962;SGB=115.456;VDB=0.396226;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3482-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN3482-S SNP C -> T AC=1;AN=184;BQB=0.995153;DP=3120;DP4=1614,1433,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.77889e-10;MQSB=0.680003;RPB=0.538663;SGB=53.3568;VDB=0.889539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN3599-S SNP C -> T AC=2;AN=188;BQB=0.887895;DP=3078;DP4=1547,1451,17,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.39521e-16;MQSB=0.96731;RPB=0.302146;SGB=139.845;VDB=0.852313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3946-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN3946-S SNP C -> T AC=2;AN=168;BQB=0.802389;DP=2719;DP4=1332,1276,17,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.76439e-16;MQSB=0.968302;RPB=0.989924;SGB=103.364;VDB=0.064758;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN4176-S SNP C -> T AC=2;AN=170;BQB=0.961136;DP=2569;DP4=1231,1271,7,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.00803e-10;MQSB=0.989618;RPB=0.985518;SGB=70.0854;VDB=0.560992;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN874-S Single Base Substitution C-T INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN949-S Single Base Substitution C-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.2:11385050 chr02:011385050 0 W/11385050-11385050 FN975-S Single Base Substitution C-T INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN661-S.SNP.2:11392242 chr02:011392242 0 W/11392242-11392242 FN661-S Single Base Substitution C-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN242-S.SNP.2:11402820 chr02:011402820 0 W/11402820-11402820 FN242-S Single Base Substitution A-G INTRON HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN242-S.SNP.2:11403584 chr02:011403584 0 W/11403584-11403584 FN242-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g19510 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2167-S.SNP.2:11432423 chr02:011432423 0 W/11432423-11432423 FN2167-S SNP T -> A AC=1;AN=168;BQB=0.263499;DP=3342;DP4=1790,1520,16,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.92502e-12;MQSB=0.970501;RPB=0.776627;SGB=72.4869;VDB=0.452439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.2:11435831 chr02:011435831 0 W/11435831-11435831 FN2231-S SNP C -> A AC=2;AN=190;BQB=0.981007;DP=4642;DP4=2154,2182,23,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.06937e-22;MQSB=0.267303;RPB=0.390691;SGB=153.378;VDB=0.322616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K380N|440|LOC_Os02g19570|protein_coding|CODING|LOC_Os02g19570.1|2|1) FN-348.SNP.2:11442440 chr02:011442440 0 W/11442440-11442440 FN-348 Single Base Substitution T-C INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN2730-S.SNP.2:11445051 chr02:011445051 0 W/11445051-11445051 FN2730-S SNP G -> T AC=2;AN=200;BQB=1;DP=5510;DP4=2878,2329,14,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.82482e-17;MQSB=0.812015;RPB=0.555304;SGB=63.3521;VDB=0.627797;EFF=INTERGENIC(MODIFIER||||||||||1) FN4017-S.SNP.2:11448817 chr02:011448817 0 W/11448817-11448817 FN4017-S SNP G -> C AC=1;AN=168;BQB=0.809309;DP=2744;DP4=1578,1086,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.18651e-10;MQSB=0.992909;RPB=0.982382;SGB=34.3388;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.2:11452393 chr02:011452393 0 W/11452393-11452393 FN4031-S SNP G -> A AC=1;AN=168;BQB=0.655977;DP=2684;DP4=1455,1105,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.73861e-09;MQSB=0.999978;RPB=0.663179;SGB=45.0404;VDB=0.879197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.2:11454414 chr02:011454414 0 W/11454414-11454414 FN2226-S SNP A -> G AC=1;AN=190;BQB=0.931682;DP=5618;DP4=2828,2375,19,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.001246;MQB=4.31892e-16;MQSB=1.11308e-06;RPB=0.855104;SGB=-42.5702;VDB=0.0451152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.2:11454420 chr02:011454420 0 W/11454420-11454420 FN2226-S SNP A -> G AC=1;AN=190;BQB=0.49885;DP=5580;DP4=2736,2379,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00125448;MQB=4.38779e-15;MQSB=3.17359e-06;RPB=0.820482;SGB=96.5165;VDB=0.188762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.2:11456166 chr02:011456166 0 W/11456166-11456166 FN1453-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2433.SNP.2:11458560 chr02:011458560 0 W/11458560-11458560 FN2433 SNP C -> T AC=1;AN=200;BQB=0.573147;DP=5575;DP4=2289,2966,20,21;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0197309;MQB=3.48426e-11;MQSB=7.89758e-41;RPB=0.87633;SGB=-44.7915;VDB=0.807171;EFF=INTRON(MODIFIER||||1608|LOC_Os02g19620|protein_coding|CODING|LOC_Os02g19620.1|3|1) FN389-S.SNP.2:11458650 chr02:011458650 0 W/11458650-11458650 FN389-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os02g19620 retrotransposon protein, putative, unclassified, expressed SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-291.SNP.2:11465351 chr02:011465351 0 W/11465351-11465351 FN-291 Single Base Substitution G-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1200-S.SNP.2:11483564 chr02:011483564 0 W/11483564-11483564 FN1200-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g19640 IQ calmodulin-binding motif family protein, putative, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2097-S.SNP.2:11484427 chr02:011484427 0 W/11484427-11484427 FN2097-S SNP C -> A AC=1;AN=168;BQB=0.249835;DP=4218;DP4=2208,1962,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30159e-12;MQSB=0.889479;RPB=0.983082;SGB=-10.2027;VDB=0.750139;EFF=UTR_3_PRIME(MODIFIER||275||289|LOC_Os02g19650|protein_coding|CODING|LOC_Os02g19650.3|11|1),UTR_3_PRIME(MODIFIER||275||396|LOC_Os02g19650|protein_coding|CODING|LOC_Os02g19650.1|10|1) FN4049-S.SNP.2:11488206 chr02:011488206 0 W/11488206-11488206 FN4049-S SNP T -> C AC=2;AN=168;BQB=0.998912;DP=2597;DP4=1070,1309,1,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.33778e-08;MQSB=0.995116;RPB=0.929164;SGB=22.1847;VDB=0.90226;EFF=UTR_5_PRIME(MODIFIER||930||289|LOC_Os02g19650|protein_coding|CODING|LOC_Os02g19650.3|1|1),UTR_5_PRIME(MODIFIER||65||396|LOC_Os02g19650|protein_coding|CODING|LOC_Os02g19650.1|1|1) FN409-S.SNP.2:11502385 chr02:011502385 0 W/11502385-11502385 FN409-S Single Base Substitution A-T INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1630-S.SNP.2:11510302 chr02:011510302 0 W/11510302-11510302 FN1630-S Single Base Substitution T-G INTRON Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN868-S.SNP.2:11514668 chr02:011514668 0 W/11514668-11514668 FN868-S Single Base Substitution T-A INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3486-S.SNP.2:11519308 chr02:011519308 0 W/11519308-11519308 FN3486-S SNP T -> A AC=1;AN=184;BQB=0.445268;DP=3678;DP4=1754,1824,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.205546;MQB=0.74198;MQSB=0;RPB=0.935013;SGB=38.4058;VDB=0.281035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.2:11521405 chr02:011521405 0 W/11521405-11521405 FN3486-S SNP T -> C AC=1;AN=184;BQB=0.129472;DP=2846;DP4=1451,1310,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000107512;MQSB=8.96719e-08;RPB=0.98813;SGB=28.3187;VDB=0.999836;EFF=INTRON(MODIFIER||||243|LOC_Os02g19690|protein_coding|CODING|LOC_Os02g19690.1|6|1) FN-85.SNP.2:11531935 chr02:011531935 0 W/11531935-11531935 FN-85 Single Base Substitution A-G INTERGENIC HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-174.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN-174 Single Base Substitution T-A INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-399.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN-399 Single Base Substitution T-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2671-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN2671-S SNP T -> A AC=1;AN=200;BQB=0.32668;DP=5364;DP4=2650,2265,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.32913e-06;MQSB=0.000931549;RPB=0.0624453;SGB=25.849;VDB=0.171636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN3407-S SNP T -> A AC=2;AN=184;BQB=0.503707;DP=3136;DP4=1655,1248,13,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.85856e-11;MQSB=0.63662;RPB=0.125107;SGB=14.4113;VDB=0.422936;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN4103-S SNP T -> A AC=1;AN=182;BQB=0.779282;DP=2442;DP4=1558,723,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.30848e-06;MQSB=0.998825;RPB=0.00673032;SGB=15.6115;VDB=0.0595806;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN491-S Single Base Substitution T-A INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN786-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN786-S Single Base Substitution T-A INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN930-S.SNP.2:11535329 chr02:011535329 0 W/11535329-11535329 FN930-S Single Base Substitution T-A INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN4187-S.SNP.2:11536644 chr02:011536644 0 W/11536644-11536644 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.91418;DP=2624;DP4=1220,1285,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.33499e-05;MQSB=0.999771;RPB=0.860427;SGB=30.1021;VDB=0.351291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.2:11543059 chr02:011543059 0 W/11543059-11543059 FN1661-S Single Base Substitution C-T INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN_N2-29a-1.SNP.2:11553718 chr02:011553718 0 W/11553718-11553718 FN_N2-29a-1 Single Base Substitution A-T Homo LOC_Os02g19750 NBS-LRR type disease resistance protein, putative, expressed SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN_N2-29a-1.SNP.2:11553719 chr02:011553719 0 W/11553719-11553719 FN_N2-29a-1 Single Base Substitution A-T Homo LOC_Os02g19750 NBS-LRR type disease resistance protein, putative, expressed SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3536-S.SNP.2:11555774 chr02:011555774 0 W/11555774-11555774 FN3536-S SNP C -> G AC=1;AN=188;BQB=0.961923;DP=2885;DP4=1473,1356,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21698e-06;MQSB=0.101495;RPB=0.963763;SGB=53.5223;VDB=0.575715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.2:11557591 chr02:011557591 0 W/11557591-11557591 FN2485 SNP C -> A AC=1;AN=200;BQB=0.756289;DP=4742;DP4=2318,2186,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000421763;MQB=1.70058e-08;MQSB=0.089658;RPB=0.956585;SGB=63.4749;VDB=0.906718;EFF=INTERGENIC(MODIFIER||||||||||1) FN817-S.SNP.2:11558695 chr02:011558695 0 W/11558695-11558695 FN817-S Single Base Substitution T-A INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3437-S.SNP.2:11559723 chr02:011559723 0 W/11559723-11559723 FN3437-S SNP G -> A AC=2;AN=184;BQB=0.871321;DP=2758;DP4=1328,1299,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.96146e-15;MQSB=0.89316;RPB=0.899639;SGB=78.0093;VDB=0.903539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.2:11560219 chr02:011560219 0 W/11560219-11560219 FN3750-S SNP C -> A AC=1;AN=190;BQB=0.784308;DP=3081;DP4=1401,1442,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00032457;MQB=2.56763e-15;MQSB=0.688986;RPB=0.0593279;SGB=59.414;VDB=0.464417;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.2:11561232 chr02:011561232 0 W/11561232-11561232 FN-186 Single Base Substitution C-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-167.SNP.2:11576598 chr02:011576598 0 W/11576598-11576598 FN-167 Single Base Substitution C-G INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-166.SNP.2:11582874 chr02:011582874 0 W/11582874-11582874 FN-166 Single Base Substitution C-G INTRON HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1483-S.SNP.2:11585332 chr02:011585332 0 W/11585332-11585332 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN-390.SNP.2:11590604 chr02:011590604 0 W/11590604-11590604 FN-390 Single Base Substitution G-A INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3326-S.SNP.2:11591536 chr02:011591536 0 W/11591536-11591536 FN3326-S SNP C -> A AC=2;AN=184;BQB=0.467765;DP=2915;DP4=1477,1340,17,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.43215e-15;MQSB=0.934673;RPB=0.858101;SGB=116.749;VDB=0.270291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.2:11608366 chr02:011608366 0 W/11608366-11608366 FN1108-S Single Base Substitution G-A INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1075-S.SNP.2:11610628 chr02:011610628 0 W/11610628-11610628 FN1075-S Single Base Substitution G-T INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2327.SNP.2:11613626 chr02:011613626 0 W/11613626-11613626 FN2327 SNP C -> T AC=2;AN=192;BQB=0.749051;DP=4408;DP4=1813,2202,14,15;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=7.1394e-13;MQSB=0.996786;RPB=0.528518;SGB=93.2452;VDB=0.0639005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.2:11632002 chr02:011632002 0 W/11632002-11632002 FN-223 Single Base Substitution A-C INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2629-S.SNP.2:11634661 chr02:011634661 0 W/11634661-11634661 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.633463;DP=4487;DP4=2057,2203,7,16;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00445732;MQB=0.989078;MQSB=0.792064;RPB=0.434344;SGB=72.7161;VDB=0.693044;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.2:11637147 chr02:011637147 0 W/11637147-11637147 FN1140-S Single Base Substitution G-C INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN543-S.SNP.2:11638945 chr02:011638945 0 W/11638945-11638945 FN543-S Single Base Substitution T-G INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3976-S.SNP.2:11641676 chr02:011641676 0 W/11641676-11641676 FN3976-S SNP A -> G AC=1;AN=168;BQB=0.88602;DP=2466;DP4=1221,1154,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.55068e-08;MQSB=0.789434;RPB=0.682523;SGB=65.4653;VDB=0.0995312;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.2:11644067 chr02:011644067 0 W/11644067-11644067 W247-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN2781-S.SNP.2:11644451 chr02:011644451 0 W/11644451-11644451 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.924209;DP=3900;DP4=1894,1738,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.88144e-17;MQSB=0.83624;RPB=0.988424;SGB=57.8907;VDB=0.437529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.2:11647395 chr02:011647395 0 W/11647395-11647395 FN2418 SNP C -> T AC=1;AN=200;BQB=0.996509;DP=3231;DP4=1230,1797,5,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000176365;MQSB=1.05879e-11;RPB=0.993869;SGB=31.2392;VDB=0.175997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.2:11648432 chr02:011648432 0 W/11648432-11648432 FN1022-S Single Base Substitution T-G INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN879-S.SNP.2:11649112 chr02:011649112 0 W/11649112-11649112 FN879-S Single Base Substitution C-G INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3701-S.SNP.2:11649624 chr02:011649624 0 W/11649624-11649624 FN3701-S SNP A -> T AC=1;AN=190;BQB=0.512809;DP=2849;DP4=1351,1398,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.54241e-07;MQSB=0.98335;RPB=0.819086;SGB=58.2031;VDB=0.83035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:11651210 chr02:011651210 0 W/11651210-11651210 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.955019;DP=2282;DP4=961,1236,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.03434e-06;MQSB=0.0428724;RPB=0.24026;SGB=38.3284;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:11651211 chr02:011651211 0 W/11651211-11651211 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.627415;DP=2300;DP4=981,1261,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.05122e-06;MQSB=0.02296;RPB=0.287605;SGB=38.3284;VDB=0.353276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:11651668 chr02:011651668 0 W/11651668-11651668 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.914835;DP=2581;DP4=1341,1142,3,11;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=4.69504e-07;MQSB=0.231983;RPB=0.2822;SGB=55.806;VDB=0.622511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.2:11652177 chr02:011652177 0 W/11652177-11652177 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.833824;DP=4803;DP4=2162,2320,18,23;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.29483e-16;MQSB=0.925633;RPB=0.921483;SGB=46.4088;VDB=0.782708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.2:11658179 chr02:011658179 0 W/11658179-11658179 FN1423-S Single Base Substitution T-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.2:11658179 chr02:011658179 0 W/11658179-11658179 FN1433-S Single Base Substitution T-A INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2577-S.SNP.2:11661178 chr02:011661178 0 W/11661178-11661178 FN2577-S SNP G -> A AC=1;AN=198;BQB=0.187166;DP=4199;DP4=2139,1818,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238152;MQB=6.0467e-08;MQSB=0.992934;RPB=0.862238;SGB=-81.0108;VDB=0.835745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.2:11661658 chr02:011661658 0 W/11661658-11661658 FN2370 SNP A -> T AC=1;AN=192;BQB=0.916836;DP=5121;DP4=2677,2182,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.99152e-06;MQSB=0.998066;RPB=0.182279;SGB=40.0819;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.2:11662984 chr02:011662984 0 W/11662984-11662984 FN1355-S Single Base Substitution A-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN899-S.SNP.2:11685367 chr02:011685367 0 W/11685367-11685367 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN4247-S.SNP.2:11687144 chr02:011687144 0 W/11687144-11687144 FN4247-S SNP A -> G AC=1;AN=170;BQB=0.924429;DP=1803;DP4=716,962,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=3.42474e-07;MQSB=0.904009;RPB=0.980447;SGB=45.206;VDB=0.389411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.2:11692986 chr02:011692986 0 W/11692986-11692986 FN2628-S SNP G -> C AC=1;AN=200;BQB=0.953321;DP=5060;DP4=2537,2158,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.92748e-13;MQSB=0.887122;RPB=0.712041;SGB=-8.26887;VDB=0.54342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.2:11693229 chr02:011693229 0 W/11693229-11693229 FN2432 SNP A -> G AC=1;AN=200;BQB=0.979132;DP=5385;DP4=2592,2423,19,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.14072e-16;MQSB=0.928757;RPB=0.99998;SGB=28.752;VDB=0.845492;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.2:11693840 chr02:011693840 0 W/11693840-11693840 FN781-S Single Base Substitution G-C INTRON HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2713-S.SNP.2:11701188 chr02:011701188 0 W/11701188-11701188 FN2713-S SNP C -> G AC=1;AN=200;BQB=0.824609;DP=4993;DP4=2574,2152,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28952e-16;MQSB=0.979909;RPB=0.161603;SGB=109.527;VDB=0.157204;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.2:11701402 chr02:011701402 0 W/11701402-11701402 FN-307 Single Base Substitution A-G INTERGENIC HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN588-S.SNP.2:11713864 chr02:011713864 0 W/11713864-11713864 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2108-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN2108-S SNP G -> A AC=2;AN=168;BQB=0.997975;DP=1701;DP4=607,979,9,12;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=1.30371e-07;MQSB=0.737817;RPB=0.94539;SGB=87.6193;VDB=0.882753;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN2688-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN2688-S SNP G -> A AC=2;AN=200;BQB=0.186617;DP=4770;DP4=2376,1974,11,6;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=4.48185e-06;MQSB=0.00505405;RPB=0.643978;SGB=51.0851;VDB=0.242212;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN2767-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.971475;DP=3971;DP4=1952,1675,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=6.90462e-07;MQSB=0.067508;RPB=0.594133;SGB=58.1246;VDB=0.145838;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN3472-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN3472-S SNP G -> A AC=2;AN=184;BQB=0.182152;DP=2958;DP4=1655,1156,21,11;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=1.02544e-08;MQSB=0.000496649;RPB=0.995028;SGB=139.178;VDB=0.108908;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN3858-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.985311;DP=2104;DP4=1114,876,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.0274915;MQSB=0.0252975;RPB=0.683731;SGB=25.2211;VDB=0.221757;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN4147-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN4147-S SNP G -> A AC=2;AN=170;BQB=0.657722;DP=2190;DP4=1202,859,8,12;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=0.00509131;MQSB=0.283638;RPB=0.0258328;SGB=83.4133;VDB=0.00710955;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN729-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN729-S Single Base Substitution G-A INTRON HOMO SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN789-S.SNP.2:11717785 chr02:011717785 0 W/11717785-11717785 FN789-S Single Base Substitution G-A INTRON HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN1456-S.SNP.2:11721731 chr02:011721731 0 W/11721731-11721731 FN1456-S Single Base Substitution G-A INTRON Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1254-S.SNP.2:11722189 chr02:011722189 0 W/11722189-11722189 FN1254-S Single Base Substitution C-T INTRON HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1412-S.SNP.2:11722189 chr02:011722189 0 W/11722189-11722189 FN1412-S Single Base Substitution C-T INTRON HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2721-S.SNP.2:11722189 chr02:011722189 0 W/11722189-11722189 FN2721-S SNP C -> T AC=2;AN=200;BQB=0.933621;DP=5117;DP4=2190,2703,16,25;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.000781708;MQB=1.3107e-14;MQSB=0.170615;RPB=0.737795;SGB=183.209;VDB=0.654291;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN3839-S.SNP.2:11722189 chr02:011722189 0 W/11722189-11722189 FN3839-S SNP C -> T AC=2;AN=190;BQB=0.870651;DP=3206;DP4=1202,1902,4,25;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00124766;MQB=1.11048e-10;MQSB=0.027283;RPB=0.854799;SGB=92.9626;VDB=0.701588;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN447-S.SNP.2:11722189 chr02:011722189 0 W/11722189-11722189 FN447-S Single Base Substitution C-T INTRON HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN1424-S.SNP.2:11723886 chr02:011723886 0 W/11723886-11723886 FN1424-S Single Base Substitution G-A INTRON HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3698-S.SNP.2:11724324 chr02:011724324 0 W/11724324-11724324 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.958476;DP=2880;DP4=1366,1436,2,11;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0479167;MQB=0.897743;MQSB=4.73384e-07;RPB=0.861412;SGB=53.6492;VDB=0.0242343;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN4119-S.SNP.2:11725317 chr02:011725317 0 W/11725317-11725317 FN4119-S SNP T -> C AC=1;AN=182;BQB=0.924679;DP=3803;DP4=1712,1905,13,12;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0273468;MQB=0.00833375;MQSB=2.5703e-06;RPB=0.512168;SGB=77.758;VDB=0.0250834;EFF=INTRON(MODIFIER||||427|LOC_Os02g19924|protein_coding|CODING|LOC_Os02g19924.1|1|1) FN1058-S.SNP.2:11727838 chr02:011727838 0 W/11727838-11727838 FN1058-S Single Base Substitution C-A INTRON HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN574-S.SNP.2:11729332 chr02:011729332 0 W/11729332-11729332 FN574-S Single Base Substitution A-T INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2274-S.SNP.2:11736824 chr02:011736824 0 W/11736824-11736824 FN2274-S SNP A -> G AC=1;AN=190;BQB=0.731843;DP=4562;DP4=2081,1784,22,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.5107e-15;MQSB=2.89706e-06;RPB=0.197142;SGB=-3.2522;VDB=0.757581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.2:11741964 chr02:011741964 0 W/11741964-11741964 FN1703-S SNP C -> T AC=2;AN=188;BQB=0.0408727;DP=2511;DP4=1644,826,15,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.0097e-08;MQSB=0.879972;RPB=0.161086;SGB=-70.6427;VDB=0.185361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.2:11747171 chr02:011747171 0 W/11747171-11747171 FN2177-S SNP T -> A AC=2;AN=168;BQB=0.115204;DP=3125;DP4=1526,1558,14,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.31242e-11;MQSB=0.999992;RPB=0.778116;SGB=-44.0584;VDB=0.455126;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.2:11752977 chr02:011752977 0 W/11752977-11752977 FN_807-3-1 Single Base Substitution A-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN460-S.SNP.2:11756994 chr02:011756994 0 W/11756994-11756994 FN460-S Single Base Substitution C-T INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN_N1-150-1.SNP.2:11760147 chr02:011760147 0 W/11760147-11760147 FN_N1-150-1 Single Base Substitution T-A HET LOC_Os02g19990 reticulon domain containing protein, putative, expressed SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN691-S.SNP.2:11766395 chr02:011766395 0 W/11766395-11766395 FN691-S Single Base Substitution G-A INTERGENIC HOMO SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN471-S.SNP.2:11766547 chr02:011766547 0 W/11766547-11766547 FN471-S Single Base Substitution A-G INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3785-S.SNP.2:11770534 chr02:011770534 0 W/11770534-11770534 FN3785-S SNP T -> A AC=1;AN=190;BQB=0.679043;DP=2529;DP4=1117,1300,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.40963e-05;MQSB=0.906139;RPB=0.977598;SGB=21.8853;VDB=0.618905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.2:11770611 chr02:011770611 0 W/11770611-11770611 FN1512-S Single Base Substitution G-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1512-S.SNP.2:11770634 chr02:011770634 0 W/11770634-11770634 FN1512-S Single Base Substitution G-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3451-S.SNP.2:11771039 chr02:011771039 0 W/11771039-11771039 FN3451-S SNP G -> T AC=1;AN=184;BQB=0.981616;DP=2235;DP4=958,1207,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84065e-08;MQSB=0.994087;RPB=0.999741;SGB=53.2642;VDB=0.513195;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.2:11771761 chr02:011771761 0 W/11771761-11771761 FN_N1-130-1 Single Base Substitution G-T Homo LOC_Os02g20000 expressed protein SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN513-S.SNP.2:11781793 chr02:011781793 0 W/11781793-11781793 FN513-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g20010 retrotransposon protein, putative, LINE subclass, expressed SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3574-S.SNP.2:11785648 chr02:011785648 0 W/11785648-11785648 FN3574-S SNP C -> T AC=1;AN=188;BQB=0.973364;DP=2948;DP4=1292,1573,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.47408e-10;MQSB=0.284631;RPB=0.824011;SGB=26.0762;VDB=0.652411;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN1049-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1061-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN1061-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3508-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.944501;DP=3741;DP4=1912,1605,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55732e-10;MQSB=0.32103;RPB=0.806195;SGB=67.8739;VDB=0.669361;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R156*|157|LOC_Os02g20030|protein_coding|CODING|LOC_Os02g20030.1|1|1) FN3798-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.855494;DP=2297;DP4=1179,956,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.746e-05;MQSB=0.934856;RPB=0.968707;SGB=30.8803;VDB=0.830109;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R156*|157|LOC_Os02g20030|protein_coding|CODING|LOC_Os02g20030.1|1|1) FN3879-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.994862;DP=2043;DP4=1021,852,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.21821e-09;MQSB=0.639271;RPB=0.691411;SGB=77.6532;VDB=0.387171;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R156*|157|LOC_Os02g20030|protein_coding|CODING|LOC_Os02g20030.1|1|1) FN662-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN662-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN880-S.SNP.2:11795839 chr02:011795839 0 W/11795839-11795839 FN880-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN4188-S.SNP.2:11799978 chr02:011799978 0 W/11799978-11799978 FN4188-S SNP T -> A AC=2;AN=170;BQB=0.988188;DP=2158;DP4=852,1188,18,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000463392;MQB=1.77893e-15;MQSB=0.956251;RPB=0.938647;SGB=93.4031;VDB=0.853323;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.2:11808677 chr02:011808677 0 W/11808677-11808677 FN4137-S SNP G -> A AC=1;AN=170;BQB=0.945361;DP=2696;DP4=1440,1193,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.21564e-07;MQSB=0.998869;RPB=0.998757;SGB=43.4296;VDB=0.049599;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.2:11828630 chr02:011828630 0 W/11828630-11828630 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.995952;DP=3964;DP4=2060,1601,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.021443;MQB=0.00112234;MQSB=0;RPB=0.207718;SGB=118.476;VDB=0.608994;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.2:11832393 chr02:011832393 0 W/11832393-11832393 FN4275-S SNP G -> A AC=2;AN=170;BQB=0.964243;DP=2393;DP4=972,1330,9,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.74246e-13;MQSB=0.997695;RPB=0.70667;SGB=69.3045;VDB=0.469901;EFF=INTRON(MODIFIER||||280|LOC_Os02g20090|protein_coding|CODING|LOC_Os02g20090.1|1|1) FN2621-S.SNP.2:11834532 chr02:011834532 0 W/11834532-11834532 FN2621-S SNP A -> C AC=1;AN=200;BQB=0.74912;DP=4762;DP4=2385,2164,22,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.76369e-17;MQSB=0.892142;RPB=0.998936;SGB=-42.8173;VDB=0.965065;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgG|R1801|1804|LOC_Os02g20100|protein_coding|CODING|LOC_Os02g20100.1|7|1) FN973-S.SNP.2:11834854 chr02:011834854 0 W/11834854-11834854 FN973-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g20100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2191-S.SNP.2:11837043 chr02:011837043 0 W/11837043-11837043 FN2191-S SNP C -> A AC=1;AN=190;BQB=0.883255;DP=4206;DP4=1877,2114,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.96531e-08;MQSB=0.760383;RPB=0.309444;SGB=39.6545;VDB=0.0571999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D1020Y|1804|LOC_Os02g20100|protein_coding|CODING|LOC_Os02g20100.1|5|1) FN2639-S.SNP.2:11838771 chr02:011838771 0 W/11838771-11838771 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.214592;DP=4420;DP4=2219,1975,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19752e-12;MQSB=0.943691;RPB=0.555857;SGB=61.9006;VDB=0.0784421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A459T|1804|LOC_Os02g20100|protein_coding|CODING|LOC_Os02g20100.1|4|1) FN2639-S.SNP.2:11838772 chr02:011838772 0 W/11838772-11838772 FN2639-S SNP A -> T AC=1;AN=200;BQB=0.437396;DP=4440;DP4=2103,2020,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24777e-12;MQSB=0.999212;RPB=0.743831;SGB=81.8956;VDB=0.0283432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D458E|1804|LOC_Os02g20100|protein_coding|CODING|LOC_Os02g20100.1|4|1) FN-155.SNP.2:11839228 chr02:011839228 0 W/11839228-11839228 FN-155 Single Base Substitution G-A INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3355-S.SNP.2:11845502 chr02:011845502 0 W/11845502-11845502 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.570939;DP=2604;DP4=1244,1282,8,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.47044e-09;MQSB=0.716514;RPB=0.828101;SGB=25.7969;VDB=0.146644;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T817|2203|LOC_Os02g20110|protein_coding|CODING|LOC_Os02g20110.1|5|1) FN779-S.SNP.2:11846019 chr02:011846019 0 W/11846019-11846019 FN779-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN-107.SNP.2:11846728 chr02:011846728 0 W/11846728-11846728 FN-107 Single Base Substitution C-T STOP_GAINED HET LOC_Os02g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1162-S.SNP.2:11849995 chr02:011849995 0 W/11849995-11849995 FN1162-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN-346.SNP.2:11850975 chr02:011850975 0 W/11850975-11850975 FN-346 Single Base Substitution T-A INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3454-S.SNP.2:11852838 chr02:011852838 0 W/11852838-11852838 FN3454-S SNP T -> C AC=1;AN=184;BQB=0.999445;DP=2878;DP4=1380,1376,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000347464;MQB=0.000139652;MQSB=0.943299;RPB=0.904335;SGB=25.1826;VDB=0.910125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W2050R|2203|LOC_Os02g20110|protein_coding|CODING|LOC_Os02g20110.1|12|1) FN-363.SNP.2:11856170 chr02:011856170 0 W/11856170-11856170 FN-363 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-79.SNP.2:11857669 chr02:011857669 0 W/11857669-11857669 FN-79 Single Base Substitution A-C INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3509-S.SNP.2:11859175 chr02:011859175 0 W/11859175-11859175 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.761265;DP=2864;DP4=1399,1393,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.43676e-06;MQSB=0.788268;RPB=0.756026;SGB=48.979;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.2:11863537 chr02:011863537 0 W/11863537-11863537 FN-156 Single Base Substitution G-A INTRON HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN_807-3-1.SNP.2:11865721 chr02:011865721 0 W/11865721-11865721 FN_807-3-1 Single Base Substitution C-T HET LOC_Os02g20140 protein kinase domain containing protein, expressed SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2465.SNP.2:11871084 chr02:011871084 0 W/11871084-11871084 FN2465 SNP T -> C AC=1;AN=200;BQB=0.308987;DP=4972;DP4=2262,2369,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.19323e-08;MQSB=0.825768;RPB=0.757049;SGB=49.6594;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.2:11876071 chr02:011876071 0 W/11876071-11876071 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.530704;DP=4387;DP4=1855,2256,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12271e-10;MQSB=0.64737;RPB=0.999094;SGB=26.8797;VDB=0.979696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.2:11878304 chr02:011878304 0 W/11878304-11878304 FN3516-S SNP T -> A AC=1;AN=188;BQB=0.958765;DP=2702;DP4=1162,1056,5,2;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=7.30258e-05;MQSB=0.928981;RPB=0.836081;SGB=26.2637;VDB=0.626747;EFF=UTR_3_PRIME(MODIFIER||100||540|LOC_Os02g20160|protein_coding|CODING|LOC_Os02g20160.1|1|1) FN1094-S.SNP.2:11884336 chr02:011884336 0 W/11884336-11884336 FN1094-S Single Base Substitution C-T INTRON HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2289.SNP.2:11886366 chr02:011886366 0 W/11886366-11886366 FN2289 SNP C -> T AC=1;AN=192;BQB=0.290814;DP=4933;DP4=2125,2484,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.24779e-12;MQSB=0.952208;RPB=0.475543;SGB=-9.68954;VDB=0.0739517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.2:11903725 chr02:011903725 0 W/11903725-11903725 FN2091-S SNP T -> A AC=1;AN=168;BQB=0.788166;DP=4083;DP4=1972,2057,14,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.724e-13;MQSB=0.99673;RPB=0.879306;SGB=65.9394;VDB=0.760799;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atT|I384|709|LOC_Os02g20210|protein_coding|CODING|LOC_Os02g20210.1|2|1) FN1755-S.SNP.2:11904100 chr02:011904100 0 W/11904100-11904100 FN1755-S SNP A -> T AC=1;AN=188;BQB=0.0464002;DP=3708;DP4=1634,2014,13,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.14731e-09;MQSB=0.888707;RPB=0.998818;SGB=-108.551;VDB=0.293031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N259K|709|LOC_Os02g20210|protein_coding|CODING|LOC_Os02g20210.1|2|1) FN1573-S.SNP.2:11928762 chr02:011928762 0 W/11928762-11928762 FN1573-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g20260 retrotransposon protein, putative, unclassified, expressed SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN539-S.SNP.2:11929046 chr02:011929046 0 W/11929046-11929046 FN539-S Single Base Substitution G-A INTRON HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN3761-S.SNP.2:11932039 chr02:011932039 0 W/11932039-11932039 FN3761-S SNP T -> C AC=1;AN=190;BQB=0.969443;DP=3478;DP4=1831,1450,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7228e-09;MQSB=0.0407769;RPB=0.582614;SGB=53.8699;VDB=0.22938;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.2:11942050 chr02:011942050 0 W/11942050-11942050 FN_N1-150-1 Single Base Substitution G-C HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2158-S.SNP.2:11970751 chr02:011970751 0 W/11970751-11970751 FN2158-S SNP T -> A AC=1;AN=168;BQB=0.702697;DP=3985;DP4=2004,1820,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.000752823;MQB=0.75125;MQSB=8.36363e-31;RPB=0.991263;SGB=7.05233;VDB=0.143887;EFF=INTRON(MODIFIER||||347|LOC_Os02g20330|protein_coding|CODING|LOC_Os02g20330.1|2|1) FN1707-S.SNP.2:11990543 chr02:011990543 0 W/11990543-11990543 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.0610844;DP=3267;DP4=1378,1842,14,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000306091;MQB=1.31269e-08;MQSB=0.986522;RPB=0.100223;SGB=-236.246;VDB=0.243008;EFF=INTRON(MODIFIER||||767|LOC_Os02g20350|protein_coding|CODING|LOC_Os02g20350.1|3|1) FN1282-S.SNP.2:11992131 chr02:011992131 0 W/11992131-11992131 FN1282-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN-69.SNP.2:11995139 chr02:011995139 0 W/11995139-11995139 FN-69 Single Base Substitution T-C INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN870-S.SNP.2:11995177 chr02:011995177 0 W/11995177-11995177 FN870-S Single Base Substitution A-G INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN990-S.SNP.2:11995571 chr02:011995571 0 W/11995571-11995571 FN990-S Single Base Substitution G-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2372.SNP.2:12001730 chr02:012001730 0 W/12001730-12001730 FN2372 SNP A -> G AC=1;AN=192;BQB=0.175066;DP=5074;DP4=2275,2564,18,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.63966e-21;MQSB=0.9819;RPB=0.748727;SGB=172.448;VDB=0.879243;EFF=INTRON(MODIFIER||||494|LOC_Os02g20360|protein_coding|CODING|LOC_Os02g20360.1|1|1),INTRON(MODIFIER||||467|LOC_Os02g20360|protein_coding|CODING|LOC_Os02g20360.2|1|1) FN1011-S.SNP.2:12011970 chr02:012011970 0 W/12011970-12011970 FN1011-S Single Base Substitution C-T INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN2756-S.SNP.2:12022759 chr02:012022759 0 W/12022759-12022759 FN2756-S SNP T -> C AC=1;AN=200;BQB=0.173924;DP=5017;DP4=2550,2155,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8159e-07;MQSB=0.999519;RPB=0.942094;SGB=4.67442;VDB=0.948588;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S236|349|LOC_Os02g20394|protein_coding|CODING|LOC_Os02g20394.1|3|1) FN-55.SNP.2:12037960 chr02:012037960 0 W/12037960-12037960 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN744-S.SNP.2:12038702 chr02:012038702 0 W/12038702-12038702 FN744-S Single Base Substitution C-A INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN881-S.SNP.2:12043042 chr02:012043042 0 W/12043042-12043042 FN881-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN835-S.SNP.2:12046463 chr02:012046463 0 W/12046463-12046463 FN835-S Single Base Substitution C-T INTRON HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN598-S.SNP.2:12048932 chr02:012048932 0 W/12048932-12048932 FN598-S Single Base Substitution C-G INTRON HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2634-S.SNP.2:12051526 chr02:012051526 0 W/12051526-12051526 FN2634-S SNP G -> A AC=2;AN=200;BQB=0.34272;DP=4692;DP4=2233,2172,33,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15185e-31;MQSB=0.782552;RPB=0.113431;SGB=6.86038;VDB=0.0410346;EFF=INTRON(MODIFIER||||2063|LOC_Os02g20420|protein_coding|CODING|LOC_Os02g20420.1|1|1) FN856-S.SNP.2:12067248 chr02:012067248 0 W/12067248-12067248 FN856-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g20460 Leucine Rich Repeat family protein, expressed SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2556-S.SNP.2:12067278 chr02:012067278 0 W/12067278-12067278 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.93011;DP=4267;DP4=1909,2135,19,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.15841e-13;MQSB=0.965862;RPB=0.41629;SGB=113.881;VDB=0.662884;EFF=INTRON(MODIFIER||||700|LOC_Os02g20460|protein_coding|CODING|LOC_Os02g20460.1|2|1) FN-103.SNP.2:12067953 chr02:012067953 0 W/12067953-12067953 FN-103 Single Base Substitution G-A INTRON HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN3491-S.SNP.2:12073581 chr02:012073581 0 W/12073581-12073581 FN3491-S SNP G -> T AC=2;AN=188;BQB=0.997462;DP=2607;DP4=1313,1246,12,8;HOB=0.0210502;ICB=0.494738;MQ=24;MQ0F=0.187955;MQB=0.999698;MQSB=0;RPB=0.318559;SGB=85.3253;VDB=0.227621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L741F|1637|LOC_Os02g20470|protein_coding|CODING|LOC_Os02g20470.1|4|1) FN3471-S.SNP.2:12078199 chr02:012078199 0 W/12078199-12078199 FN3471-S SNP G -> A AC=1;AN=184;BQB=0.952198;DP=3072;DP4=1457,1527,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.198242;MQB=0.915707;MQSB=1.2178e-22;RPB=0.752161;SGB=48.7425;VDB=0.964611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3471-S.SNP.2:12078200 chr02:012078200 0 W/12078200-12078200 FN3471-S SNP G -> A AC=1;AN=184;BQB=0.995742;DP=3076;DP4=1458,1525,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.202211;MQB=0.940718;MQSB=1.68309e-21;RPB=0.829967;SGB=53.2642;VDB=0.953021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.2:12083559 chr02:012083559 0 W/12083559-12083559 FN3722-S SNP G -> A AC=2;AN=190;BQB=0.947088;DP=3633;DP4=1911,1529,15,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13232e-19;MQSB=0.948249;RPB=0.304326;SGB=110.732;VDB=0.162281;EFF=INTERGENIC(MODIFIER||||||||||1) FN1727-S.SNP.2:12085177 chr02:012085177 0 W/12085177-12085177 FN1727-S SNP G -> A AC=1;AN=188;BQB=0.982083;DP=3558;DP4=1326,2211,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.99788e-07;MQSB=0.999349;RPB=0.889919;SGB=-16.0863;VDB=0.525751;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.2:12085667 chr02:012085667 0 W/12085667-12085667 FN3506-S SNP T -> C AC=2;AN=188;BQB=0.968449;DP=2408;DP4=919,1313,14,15;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.79808e-11;MQSB=0.000555827;RPB=0.453708;SGB=92.677;VDB=0.425839;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.2:12095564 chr02:012095564 0 W/12095564-12095564 FN1026-S Single Base Substitution G-A INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. W481-5-1.SNP.2:12098365 chr02:012098365 0 W/12098365-12098365 W481-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2491.SNP.2:12099505 chr02:012099505 0 W/12099505-12099505 FN2491 SNP C -> T AC=1;AN=200;BQB=0.343308;DP=4504;DP4=2215,2011,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39218e-05;MQSB=0.978054;RPB=0.980555;SGB=25.849;VDB=0.940883;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.2:12108727 chr02:012108727 0 W/12108727-12108727 FN323-S Single Base Substitution T-C INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-309.SNP.2:12109637 chr02:012109637 0 W/12109637-12109637 FN-309 Single Base Substitution C-T INTRON HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN669-S.SNP.2:12112065 chr02:012112065 0 W/12112065-12112065 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3759-S.SNP.2:12113308 chr02:012113308 0 W/12113308-12113308 FN3759-S SNP C -> A AC=1;AN=190;BQB=0.827472;DP=2346;DP4=1201,1042,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.42982e-05;MQSB=0.900011;RPB=0.676728;SGB=46.7622;VDB=0.318781;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.2:12115347 chr02:012115347 0 W/12115347-12115347 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.936878;DP=3183;DP4=1782,1246,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=3.67735e-05;MQSB=0.910483;RPB=0.939659;SGB=39.699;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.2:12119369 chr02:012119369 0 W/12119369-12119369 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3832-S.SNP.2:12122360 chr02:012122360 0 W/12122360-12122360 FN3832-S SNP T -> C AC=1;AN=190;BQB=0.989488;DP=2927;DP4=1336,1488,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13963e-06;MQSB=0.926508;RPB=0.531899;SGB=49.0954;VDB=0.745883;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.2:12125224 chr02:012125224 0 W/12125224-12125224 FN474-S Single Base Substitution C-T INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2639-S.SNP.2:12134506 chr02:012134506 0 W/12134506-12134506 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.948535;DP=4801;DP4=2264,2305,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00145803;MQB=7.74566e-17;MQSB=0.905375;RPB=0.999226;SGB=127.947;VDB=0.599213;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L85|1122|LOC_Os02g20570|protein_coding|CODING|LOC_Os02g20570.1|1|1) FN1277-S.SNP.2:12139425 chr02:012139425 0 W/12139425-12139425 FN1277-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3750-S.SNP.2:12139493 chr02:012139493 0 W/12139493-12139493 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.756535;DP=3232;DP4=1619,1486,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000309406;MQB=1.08609e-07;MQSB=0.0182556;RPB=0.24031;SGB=11.8805;VDB=0.00913996;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.2:12140071 chr02:012140071 0 W/12140071-12140071 FN627-S Single Base Substitution C-T INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN1427-S.SNP.2:12146797 chr02:012146797 0 W/12146797-12146797 FN1427-S Single Base Substitution T-A INTRON HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN951-S.SNP.2:12149827 chr02:012149827 0 W/12149827-12149827 FN951-S Single Base Substitution C-A INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3701-S.SNP.2:12160774 chr02:012160774 0 W/12160774-12160774 FN3701-S SNP G -> T AC=1;AN=190;BQB=0.962066;DP=3176;DP4=1448,1565,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0192065;MQB=0.00136801;MQSB=0.103295;RPB=0.776723;SGB=-13.7759;VDB=0.183541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.2:12161519 chr02:012161519 0 W/12161519-12161519 FN3832-S SNP G -> T AC=2;AN=190;BQB=0.695103;DP=3236;DP4=1269,1832,13,14;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0435723;MQB=0.934195;MQSB=0;RPB=0.093509;SGB=117.403;VDB=0.420352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.2:12165903 chr02:012165903 0 W/12165903-12165903 FN2465 SNP A -> G AC=1;AN=200;BQB=0.973216;DP=4995;DP4=2414,2320,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39555e-07;MQSB=0.992493;RPB=0.615378;SGB=45.0543;VDB=0.384474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.2:12167897 chr02:012167897 0 W/12167897-12167897 FN2550-S SNP G -> A AC=2;AN=198;BQB=0.891082;DP=4054;DP4=1929,1858,9,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.008e-09;MQSB=0.673358;RPB=0.514722;SGB=42.3199;VDB=0.0221067;EFF=INTRON(MODIFIER||||578|LOC_Os02g20650|protein_coding|CODING|LOC_Os02g20650.1|1|1) FN-137.SNP.2:12169949 chr02:012169949 0 W/12169949-12169949 FN-137 Single Base Substitution T-G INTRON HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4141-S.SNP.2:12172578 chr02:012172578 0 W/12172578-12172578 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.974445;DP=2394;DP4=1237,1091,13,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.73976e-09;MQSB=0.899063;RPB=0.588291;SGB=19.8839;VDB=0.133824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1435I|1527|LOC_Os02g20660|protein_coding|CODING|LOC_Os02g20660.1|6|1) FN2388.SNP.2:12181085 chr02:012181085 0 W/12181085-12181085 FN2388 SNP C -> T AC=1;AN=200;BQB=0.895361;DP=4286;DP4=1916,2118,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8298e-08;MQSB=0.960276;RPB=0.84207;SGB=-13.7154;VDB=0.584599;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.2:12188643 chr02:012188643 0 W/12188643-12188643 FN4272-S SNP T -> A AC=1;AN=170;BQB=0.0650493;DP=2327;DP4=1330,857,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00203507;MQSB=0.330097;RPB=0.713719;SGB=17.4413;VDB=0.984275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.2:12191261 chr02:012191261 0 W/12191261-12191261 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.977646;DP=4421;DP4=2091,2064,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.66794e-20;MQSB=0.885969;RPB=0.864157;SGB=105.163;VDB=0.258172;EFF=INTERGENIC(MODIFIER||||||||||1) FN_776-5-1.SNP.2:12196674 chr02:012196674 0 W/12196674-12196674 FN_776-5-1 Single Base Substitution C-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2496.SNP.2:12199549 chr02:012199549 0 W/12199549-12199549 FN2496 SNP T -> C AC=1;AN=200;BQB=0.430219;DP=4687;DP4=2386,2006,4,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000786017;MQSB=0.00779039;RPB=0.779187;SGB=29.4541;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.2:12200367 chr02:012200367 0 W/12200367-12200367 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.825941;DP=4984;DP4=2231,2438,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000601926;MQB=0.000119691;MQSB=0.486916;RPB=0.85185;SGB=10.8904;VDB=0.560194;EFF=INTERGENIC(MODIFIER||||||||||1) FN-60.SNP.2:12202682 chr02:012202682 0 W/12202682-12202682 FN-60 Single Base Substitution G-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN2500.SNP.2:12208436 chr02:012208436 0 W/12208436-12208436 FN2500 SNP C -> T AC=2;AN=200;BQB=0.990749;DP=5025;DP4=2692,2077,26,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.97298e-24;MQSB=0.98344;RPB=0.24147;SGB=144.819;VDB=0.726267;EFF=INTRON(MODIFIER||||203|LOC_Os02g20700|protein_coding|CODING|LOC_Os02g20700.1|1|1) FN3700-S.SNP.2:12219491 chr02:012219491 0 W/12219491-12219491 FN3700-S SNP G -> A AC=1;AN=190;BQB=0.879473;DP=2735;DP4=1198,1400,8,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.4236e-12;MQSB=0.845701;RPB=0.147098;SGB=108.296;VDB=0.483864;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K367|390|LOC_Os02g20720|protein_coding|CODING|LOC_Os02g20720.1|1|1) FN1237-S.SNP.2:12220737 chr02:012220737 0 W/12220737-12220737 FN1237-S Single Base Substitution T-C INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1700-S.SNP.2:12221423 chr02:012221423 0 W/12221423-12221423 FN1700-S SNP C -> G AC=1;AN=188;BQB=0.70544;DP=3401;DP4=1709,1672,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=1.73751e-05;MQSB=0.0438129;RPB=0.971763;SGB=20.9896;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.2:12223511 chr02:012223511 0 W/12223511-12223511 FN1568-S Single Base Substitution G-A INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1456-S.SNP.2:12225367 chr02:012225367 0 W/12225367-12225367 FN1456-S Single Base Substitution T-A INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1040-S.SNP.2:12244485 chr02:012244485 0 W/12244485-12244485 FN1040-S Single Base Substitution C-T INTERGENIC HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3448-S.SNP.2:12248275 chr02:012248275 0 W/12248275-12248275 FN3448-S SNP A -> T AC=1;AN=184;BQB=0.621822;DP=2852;DP4=1283,1412,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=7.40881e-06;MQSB=0.0454396;RPB=0.735765;SGB=46.3132;VDB=0.806539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.2:12259061 chr02:012259061 0 W/12259061-12259061 FN3388-S SNP G -> T AC=1;AN=184;BQB=0.994832;DP=3059;DP4=1757,1155,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0179797;MQB=0.0145596;MQSB=0.0933439;RPB=0.880631;SGB=57.786;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.2:12260682 chr02:012260682 0 W/12260682-12260682 FN3404-S SNP C -> T AC=2;AN=184;BQB=0.933168;DP=2792;DP4=1249,1452,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.62192e-13;MQSB=0.854911;RPB=0.334418;SGB=48.493;VDB=0.559037;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.2:12260682 chr02:012260682 0 W/12260682-12260682 FN971-S Single Base Substitution C-T INTERGENIC HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1488-S.SNP.2:12263984 chr02:012263984 0 W/12263984-12263984 FN1488-S Single Base Substitution A-G INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3773-S.SNP.2:12264793 chr02:012264793 0 W/12264793-12264793 FN3773-S SNP T -> C AC=1;AN=190;BQB=0.987569;DP=2780;DP4=1385,1305,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.24288e-07;MQSB=0.845616;RPB=0.975508;SGB=49.0954;VDB=0.129134;EFF=INTRON(MODIFIER||||255|LOC_Os02g20760|protein_coding|CODING|LOC_Os02g20760.1|2|1) FN2282.SNP.2:12272488 chr02:012272488 0 W/12272488-12272488 FN2282 SNP A -> C AC=1;AN=192;BQB=0.858595;DP=4815;DP4=2209,2339,13,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39649e-17;MQSB=0.962812;RPB=0.121681;SGB=-43.1695;VDB=0.326766;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.2:12275814 chr02:012275814 0 W/12275814-12275814 FN4065-S SNP G -> A AC=2;AN=168;BQB=0.980126;DP=2255;DP4=882,1265,6,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.38015e-11;MQSB=0.866928;RPB=0.387296;SGB=87.6193;VDB=0.481799;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.2:12283488 chr02:012283488 0 W/12283488-12283488 FN-220 Single Base Substitution G-A INTRON HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN814-S.SNP.2:12290743 chr02:012290743 0 W/12290743-12290743 FN814-S Single Base Substitution T-G INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2183-S.SNP.2:12296959 chr02:012296959 0 W/12296959-12296959 FN2183-S SNP T -> C AC=1;AN=190;BQB=0.390502;DP=4803;DP4=2262,2268,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30514e-15;MQSB=0.987711;RPB=0.927927;SGB=69.6295;VDB=0.45153;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.2:12301691 chr02:012301691 0 W/12301691-12301691 W22-2-1 Single Base Substitution G-C INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3976-S.SNP.2:12304520 chr02:012304520 0 W/12304520-12304520 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.995895;DP=2403;DP4=1122,1194,3,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.95896e-08;MQSB=0.771184;RPB=0.998748;SGB=27.0464;VDB=0.363884;EFF=INTERGENIC(MODIFIER||||||||||1) FN1128-S.SNP.2:12308803 chr02:012308803 0 W/12308803-12308803 FN1128-S Single Base Substitution G-A INTERGENIC HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1240-S.SNP.2:12309884 chr02:012309884 0 W/12309884-12309884 FN1240-S Single Base Substitution G-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1577-S.SNP.2:12317141 chr02:012317141 0 W/12317141-12317141 FN1577-S Single Base Substitution G-T INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4074-S.SNP.2:12324036 chr02:012324036 0 W/12324036-12324036 FN4074-S SNP A -> T AC=1;AN=182;BQB=0.614631;DP=3101;DP4=1469,1528,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.95726e-08;MQSB=1;RPB=0.672263;SGB=53.182;VDB=0.545592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.2:12328539 chr02:012328539 0 W/12328539-12328539 FN2315 SNP G -> A AC=1;AN=192;BQB=0.971457;DP=5297;DP4=2578,2393,11,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.10969e-17;MQSB=0.937965;RPB=0.989376;SGB=-6.30345;VDB=0.296401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.2:12348673 chr02:012348673 0 W/12348673-12348673 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.979782;DP=2341;DP4=1284,937,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.11973e-09;MQSB=0.870715;RPB=0.375935;SGB=21.1058;VDB=0.513919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.2:12349337 chr02:012349337 0 W/12349337-12349337 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.94472;DP=2615;DP4=1150,1377,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00688337;MQB=0.78269;MQSB=0.00027499;RPB=0.997358;SGB=35.4339;VDB=0.296895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E100K|184|LOC_Os02g20880|protein_coding|CODING|LOC_Os02g20880.1|2|1) FN4099-S.SNP.2:12355742 chr02:012355742 0 W/12355742-12355742 FN4099-S SNP G -> A AC=1;AN=182;BQB=0.973212;DP=2663;DP4=1265,1342,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.07409e-07;MQSB=0.973124;RPB=0.907541;SGB=44.1115;VDB=0.78249;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.2:12361693 chr02:012361693 0 W/12361693-12361693 FN1116-S Single Base Substitution C-T INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN2701-S.SNP.2:12370439 chr02:012370439 0 W/12370439-12370439 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.520587;DP=4756;DP4=2378,2085,18,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49939e-16;MQSB=0.87678;RPB=0.906994;SGB=114.132;VDB=0.00277771;EFF=INTRON(MODIFIER||||537|LOC_Os02g20930|protein_coding|CODING|LOC_Os02g20930.1|7|1) FN3626-S.SNP.2:12372183 chr02:012372183 0 W/12372183-12372183 FN3626-S SNP T -> C AC=1;AN=190;BQB=0.59699;DP=3050;DP4=1549,1389,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.53948e-05;MQSB=0.95423;RPB=0.744948;SGB=44.5415;VDB=0.952995;EFF=INTRON(MODIFIER||||537|LOC_Os02g20930|protein_coding|CODING|LOC_Os02g20930.1|12|1) FN789-S.SNP.2:12374968 chr02:012374968 0 W/12374968-12374968 FN789-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2558-S.SNP.2:12388963 chr02:012388963 0 W/12388963-12388963 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.70822;DP=4432;DP4=2110,2028,27,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.12297e-29;MQSB=0.93845;RPB=0.418556;SGB=10.5641;VDB=0.988397;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q175*|619|LOC_Os02g20950|protein_coding|CODING|LOC_Os02g20950.1|5|1),SPLICE_SITE_REGION(LOW||||619|LOC_Os02g20950|protein_coding|CODING|LOC_Os02g20950.1|5|1);LOF=(LOC_Os02g20950|LOC_Os02g20950|1|1.00);NMD=(LOC_Os02g20950|LOC_Os02g20950|1|1.00) FN2412.SNP.2:12400378 chr02:012400378 0 W/12400378-12400378 FN2412 SNP T -> C AC=1;AN=200;BQB=0.356841;DP=4889;DP4=2429,2234,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22105e-05;MQSB=0.979629;RPB=0.398926;SGB=33.0593;VDB=0.504569;EFF=INTRON(MODIFIER||||738|LOC_Os02g20970|protein_coding|CODING|LOC_Os02g20970.1|9|1) FN3462-S.SNP.2:12408536 chr02:012408536 0 W/12408536-12408536 FN3462-S SNP G -> A AC=2;AN=184;BQB=0.995208;DP=2419;DP4=1231,1093,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.72076e-11;MQSB=0.999123;RPB=0.519916;SGB=66.8296;VDB=0.428107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.2:12408537 chr02:012408537 0 W/12408537-12408537 FN3462-S SNP G -> A AC=2;AN=184;BQB=0.569716;DP=2412;DP4=1213,1104,11,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.70918e-11;MQSB=0.974935;RPB=0.243477;SGB=30.8405;VDB=0.352198;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.2:12414148 chr02:012414148 0 W/12414148-12414148 FN3310-S SNP T -> C AC=1;AN=184;BQB=0.403515;DP=2299;DP4=607,1541,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000434972;MQB=6.94263e-05;MQSB=2.17763e-29;RPB=0.97481;SGB=42.7914;VDB=0.342358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.2:12414409 chr02:012414409 0 W/12414409-12414409 FN2337 SNP T -> C AC=1;AN=192;BQB=0.849413;DP=3981;DP4=1851,1887,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0035167;MQB=3.85487e-05;MQSB=0.0774391;RPB=0.335542;SGB=36.2157;VDB=0.433355;EFF=UTR_3_PRIME(MODIFIER||2589||287|LOC_Os02g20980|protein_coding|CODING|LOC_Os02g20980.2|10|1) FN2602-S.SNP.2:12416463 chr02:012416463 0 W/12416463-12416463 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.930548;DP=4247;DP4=2146,1901,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0011773;MQB=8.68019e-06;MQSB=0.102078;RPB=0.607054;SGB=-0.221308;VDB=0.809805;EFF=INTRON(MODIFIER||||287|LOC_Os02g20980|protein_coding|CODING|LOC_Os02g20980.2|8|1) FN3534-S.SNP.2:12423352 chr02:012423352 0 W/12423352-12423352 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.653618;DP=2750;DP4=1522,1163,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00181818;MQB=7.50523e-07;MQSB=0.0632071;RPB=0.977229;SGB=13.3597;VDB=0.829708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.2:12426862 chr02:012426862 0 W/12426862-12426862 FN1623-S Single Base Substitution T-C INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2421.SNP.2:12429016 chr02:012429016 0 W/12429016-12429016 FN2421 SNP G -> C AC=2;AN=200;BQB=0.995297;DP=4562;DP4=2209,2074,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.24811e-22;MQSB=0.981007;RPB=0.980655;SGB=183.209;VDB=0.255492;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.2:12431282 chr02:012431282 0 W/12431282-12431282 FN462-S Single Base Substitution A-G INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3378-S.SNP.2:12431683 chr02:012431683 0 W/12431683-12431683 FN3378-S SNP G -> A AC=1;AN=184;BQB=0.430326;DP=2665;DP4=1357,1201,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.96631e-06;MQSB=0.974424;RPB=0.143081;SGB=5.28054;VDB=0.863512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.2:12436184 chr02:012436184 0 W/12436184-12436184 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.923453;DP=2946;DP4=1450,1370,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.20429e-10;MQSB=0.969929;RPB=0.918766;SGB=75.8731;VDB=0.696864;EFF=INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.1|1|1),INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.2|1|1) FN2305.SNP.2:12436788 chr02:012436788 0 W/12436788-12436788 FN2305 SNP C -> T AC=1;AN=192;BQB=0.169134;DP=4642;DP4=2098,2232,17,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.17052e-16;MQSB=0.977628;RPB=0.187663;SGB=-117.852;VDB=0.62347;EFF=INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.1|1|1),INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.2|1|1) FN2546-S.SNP.2:12437428 chr02:012437428 0 W/12437428-12437428 FN2546-S SNP A -> T AC=1;AN=198;BQB=0.89307;DP=3993;DP4=1963,1722,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.69462e-15;MQSB=0.88641;RPB=0.281005;SGB=-41.0942;VDB=0.376522;EFF=INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.1|1|1),INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.2|1|1) FN2553-S.SNP.2:12437812 chr02:012437812 0 W/12437812-12437812 FN2553-S SNP T -> G AC=2;AN=198;BQB=0.990597;DP=4517;DP4=2093,2172,18,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.13786e-21;MQSB=0.743638;RPB=0.971731;SGB=122.837;VDB=0.111852;EFF=INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.1|1|1),INTRON(MODIFIER||||450|LOC_Os02g21009|protein_coding|CODING|LOC_Os02g21009.2|1|1) FN1520-S.SNP.2:12443646 chr02:012443646 0 W/12443646-12443646 FN1520-S Single Base Substitution G-T INTRON HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1493-S.SNP.2:12456156 chr02:012456156 0 W/12456156-12456156 FN1493-S Single Base Substitution A-G INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN_N1-150-1.SNP.2:12461088 chr02:012461088 0 W/12461088-12461088 FN_N1-150-1 Single Base Substitution T-C HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN507-S.SNP.2:12461393 chr02:012461393 0 W/12461393-12461393 FN507-S Single Base Substitution C-T INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN507-S.SNP.2:12461394 chr02:012461394 0 W/12461394-12461394 FN507-S Single Base Substitution T-C INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-216.SNP.2:12467319 chr02:012467319 0 W/12467319-12467319 FN-216 Single Base Substitution G-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3725-S.SNP.2:12470378 chr02:012470378 0 W/12470378-12470378 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.525451;DP=2972;DP4=1316,1552,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15316e-09;MQSB=0.964173;RPB=0.973597;SGB=39.6545;VDB=0.337067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.2:12470383 chr02:012470383 0 W/12470383-12470383 FN3725-S SNP A -> T AC=1;AN=190;BQB=0.716397;DP=2984;DP4=1275,1486,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84568e-09;MQSB=0.950032;RPB=0.873246;SGB=53.6492;VDB=0.293274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.2:12470385 chr02:012470385 0 W/12470385-12470385 FN3725-S SNP A -> T AC=1;AN=190;BQB=0.426988;DP=2984;DP4=1310,1508,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29976e-09;MQSB=0.984394;RPB=0.545595;SGB=39.6545;VDB=0.372984;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.2:12476093 chr02:012476093 0 W/12476093-12476093 FN1120-S Single Base Substitution C-T INTERGENIC HOMO SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN3824-S.SNP.2:12477412 chr02:012477412 0 W/12477412-12477412 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.998996;DP=2619;DP4=1319,1226,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81839e-06;MQSB=0.951651;RPB=0.29441;SGB=21.8853;VDB=0.676898;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.2:12484361 chr02:012484361 0 W/12484361-12484361 FN1241-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g21060 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. W385-6-8-4.SNP.2:12485352 chr02:012485352 0 W/12485352-12485352 W385-6-8-4 Single Base Substitution G-A INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1097-S.SNP.2:12486741 chr02:012486741 0 W/12486741-12486741 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1228-S.SNP.2:12496415 chr02:012496415 0 W/12496415-12496415 FN1228-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3512-S.SNP.2:12497437 chr02:012497437 0 W/12497437-12497437 FN3512-S SNP A -> G AC=1;AN=188;BQB=0.887766;DP=2555;DP4=1303,1072,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.27881e-08;MQSB=0.952461;RPB=0.896234;SGB=53.7007;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.2:12497959 chr02:012497959 0 W/12497959-12497959 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN3665-S.SNP.2:12505382 chr02:012505382 0 W/12505382-12505382 FN3665-S SNP A -> G AC=1;AN=190;BQB=0.969658;DP=2889;DP4=1432,1211,17,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78313e-17;MQSB=0.999233;RPB=0.99569;SGB=-43.0163;VDB=0.213417;EFF=UTR_5_PRIME(MODIFIER||189||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.3|1|1),INTRON(MODIFIER||||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.2|2|1),INTRON(MODIFIER||||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.1|2|1) FN3665-S.SNP.2:12505385 chr02:012505385 0 W/12505385-12505385 FN3665-S SNP A -> G AC=1;AN=190;BQB=0.760993;DP=2881;DP4=1472,1250,20,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.34267e-20;MQSB=0.98196;RPB=0.883979;SGB=135.619;VDB=0.459474;EFF=UTR_5_PRIME(MODIFIER||192||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.3|1|1),INTRON(MODIFIER||||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.2|2|1),INTRON(MODIFIER||||254|LOC_Os02g21090|protein_coding|CODING|LOC_Os02g21090.1|2|1) FN2731-S.SNP.2:12519822 chr02:012519822 0 W/12519822-12519822 FN2731-S SNP G -> T AC=1;AN=200;BQB=0.952688;DP=4813;DP4=2223,2318,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.79721e-15;MQSB=0.948626;RPB=0.28004;SGB=100.316;VDB=0.859505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.2:12524590 chr02:012524590 0 W/12524590-12524590 FN3793-S SNP T -> C AC=1;AN=190;BQB=0.909697;DP=2584;DP4=1308,1176,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07371e-05;MQSB=0.998937;RPB=0.571746;SGB=30.8803;VDB=0.935918;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.2:12532735 chr02:012532735 0 W/12532735-12532735 FN1150-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g21110 OsFBK6 - F-box domain and kelch repeat containing protein, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN3371-S.SNP.2:12534494 chr02:012534494 0 W/12534494-12534494 FN3371-S SNP G -> A AC=1;AN=184;BQB=0.42205;DP=2846;DP4=1384,1336,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00137022;MQSB=0.989183;RPB=0.772646;SGB=25.1826;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.2:12537487 chr02:012537487 0 W/12537487-12537487 FN2166-S SNP C -> T AC=2;AN=168;BQB=0.798197;DP=4321;DP4=2307,1923,24,23;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=7.16504e-08;MQSB=0.597852;RPB=0.998979;SGB=-105.729;VDB=0.793904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.2:12539994 chr02:012539994 0 W/12539994-12539994 FN2598-S SNP G -> A AC=2;AN=198;BQB=0.733689;DP=4523;DP4=2083,2173,18,33;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=7.67761e-19;MQSB=0.00579582;RPB=0.983332;SGB=61.9884;VDB=0.627312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.2:12540662 chr02:012540662 0 W/12540662-12540662 FN3856-S SNP C -> T AC=2;AN=158;BQB=0.972098;DP=2466;DP4=1185,1175,11,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.23552e-17;MQSB=0.981762;RPB=0.610311;SGB=59.3604;VDB=0.0654073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.2:12541322 chr02:012541322 0 W/12541322-12541322 FN3790-S SNP C -> G AC=1;AN=190;BQB=0.943817;DP=2232;DP4=759,1348,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.62198e-05;MQSB=0.768015;RPB=0.938532;SGB=35.4339;VDB=0.280203;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.2:12541382 chr02:012541382 0 W/12541382-12541382 FN-286 Single Base Substitution T-C INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-236.SNP.2:12542738 chr02:012542738 0 W/12542738-12542738 FN-236 Single Base Substitution G-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-236.SNP.2:12542739 chr02:012542739 0 W/12542739-12542739 FN-236 Single Base Substitution C-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2209-S.SNP.2:12543034 chr02:012543034 0 W/12543034-12543034 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.39467;DP=3618;DP4=1662,1729,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0240464;MQB=0.673463;MQSB=8.80306e-15;RPB=0.804896;SGB=39.6545;VDB=0.385225;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.2:12544330 chr02:012544330 0 W/12544330-12544330 FN321-S Single Base Substitution G-T INTERGENIC HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2791-S.SNP.2:12547730 chr02:012547730 0 W/12547730-12547730 FN2791-S SNP C -> G AC=1;AN=198;BQB=0.228241;DP=3724;DP4=1739,1747,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24451e-14;MQSB=0.992558;RPB=0.990927;SGB=28.4908;VDB=0.206702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C585W|701|LOC_Os02g21130|protein_coding|CODING|LOC_Os02g21130.1|8|1) FN-87.SNP.2:12550116 chr02:012550116 0 W/12550116-12550116 FN-87 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g21140 retrotransposon protein, putative, unclassified, expressed SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3549-S.SNP.2:12554356 chr02:012554356 0 W/12554356-12554356 FN3549-S SNP G -> A AC=1;AN=188;BQB=0.629337;DP=3460;DP4=1482,1904,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.50318e-09;MQSB=0.9864;RPB=0.999255;SGB=58.0655;VDB=0.847865;EFF=INTRON(MODIFIER||||688|LOC_Os02g21150|protein_coding|CODING|LOC_Os02g21150.1|1|1) FN2163-S.SNP.2:12557015 chr02:012557015 0 W/12557015-12557015 FN2163-S SNP T -> A AC=1;AN=168;BQB=0.0134682;DP=2521;DP4=1665,830,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.04076e-07;MQSB=0.371363;RPB=0.440823;SGB=-15.3725;VDB=0.782382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.2:12560708 chr02:012560708 0 W/12560708-12560708 FN1154-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN890-S.SNP.2:12561955 chr02:012561955 0 W/12561955-12561955 FN890-S Single Base Substitution T-C INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN-181.SNP.2:12564491 chr02:012564491 0 W/12564491-12564491 FN-181 Single Base Substitution C-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3439-S.SNP.2:12566714 chr02:012566714 0 W/12566714-12566714 FN3439-S SNP T -> G AC=1;AN=184;BQB=0.441773;DP=3049;DP4=1660,1257,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.23396e-08;MQSB=0.997758;RPB=0.811631;SGB=-15.2358;VDB=0.821693;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.2:12566764 chr02:012566764 0 W/12566764-12566764 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.992409;DP=4333;DP4=2213,1783,20,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.47306e-14;MQSB=0.240065;RPB=0.555792;SGB=96.5165;VDB=0.212583;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.2:12569877 chr02:012569877 0 W/12569877-12569877 FN414-S Single Base Substitution T-A INTERGENIC HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN414-S.SNP.2:12569880 chr02:012569880 0 W/12569880-12569880 FN414-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN-5.SNP.2:12577755 chr02:012577755 0 W/12577755-12577755 FN-5 Single Base Substitution C-T INTRON Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN2659-S.SNP.2:12584953 chr02:012584953 0 W/12584953-12584953 FN2659-S SNP T -> G AC=2;AN=200;BQB=0.532179;DP=4831;DP4=2311,2285,17,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.89402e-20;MQSB=0.919923;RPB=0.305438;SGB=68.5625;VDB=0.0299831;EFF=INTRON(MODIFIER||||583|LOC_Os02g21190|protein_coding|CODING|LOC_Os02g21190.1|11|1),INTRON(MODIFIER||||581|LOC_Os02g21190|protein_coding|CODING|LOC_Os02g21190.2|11|1) FN550-S.SNP.2:12586006 chr02:012586006 0 W/12586006-12586006 FN550-S Single Base Substitution G-T INTRON HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1636-S.SNP.2:12587053 chr02:012587053 0 W/12587053-12587053 FN1636-S Single Base Substitution A-C INTRON HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. W466-5-1.SNP.2:12594193 chr02:012594193 0 W/12594193-12594193 W466-5-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2463.SNP.2:12603281 chr02:012603281 0 W/12603281-12603281 FN2463 SNP T -> C AC=2;AN=200;BQB=0.0243254;DP=5027;DP4=2625,2100,31,16;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.74901e-10;MQSB=0.099006;RPB=0.933782;SGB=159.24;VDB=0.953248;EFF=INTRON(MODIFIER||||328|LOC_Os02g21240|protein_coding|CODING|LOC_Os02g21240.1|1|1) FN4229-S.SNP.2:12607052 chr02:012607052 0 W/12607052-12607052 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.968477;DP=2119;DP4=1018,1041,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.37302e-05;MQSB=0.969821;RPB=0.995987;SGB=24.5502;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.2:12617681 chr02:012617681 0 W/12617681-12617681 FN3794-S SNP A -> G AC=1;AN=190;BQB=0.985293;DP=2570;DP4=1278,1196,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.26958e-07;MQSB=0.997723;RPB=0.690926;SGB=15.9981;VDB=0.66732;EFF=INTRON(MODIFIER||||330|LOC_Os02g21260|protein_coding|CODING|LOC_Os02g21260.1|1|1) FN725-S.SNP.2:12627403 chr02:012627403 0 W/12627403-12627403 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2199-S.SNP.2:12648696 chr02:012648696 0 W/12648696-12648696 FN2199-S SNP A -> T AC=1;AN=190;BQB=0.993408;DP=4463;DP4=1786,1955,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000448129;MQB=1.23254e-09;MQSB=0.676446;RPB=0.900445;SGB=11.8805;VDB=0.99167;EFF=INTERGENIC(MODIFIER||||||||||1) FN-97.SNP.2:12654796 chr02:012654796 0 W/12654796-12654796 FN-97 Single Base Substitution C-T INTERGENIC HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN862-S.SNP.2:12657694 chr02:012657694 0 W/12657694-12657694 FN862-S Single Base Substitution A-C INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN1220-S.SNP.2:12658075 chr02:012658075 0 W/12658075-12658075 FN1220-S Single Base Substitution G-C INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1485-S.SNP.2:12663173 chr02:012663173 0 W/12663173-12663173 FN1485-S Single Base Substitution T-C INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN1652-S.SNP.2:12664173 chr02:012664173 0 W/12664173-12664173 FN1652-S Single Base Substitution C-T INTRON HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN3808-S.SNP.2:12668838 chr02:012668838 0 W/12668838-12668838 FN3808-S SNP A -> G AC=2;AN=190;BQB=0.837504;DP=2571;DP4=1320,1185,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.57914e-09;MQSB=0.998667;RPB=0.861208;SGB=76.4186;VDB=0.3436;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F221|1123|LOC_Os02g21340|protein_coding|CODING|LOC_Os02g21340.1|3|1) FN3312-S.SNP.2:12670509 chr02:012670509 0 W/12670509-12670509 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.361682;DP=2544;DP4=1128,1294,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.14929e-05;MQSB=0.975818;RPB=0.531134;SGB=39.2697;VDB=0.620629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.2:12673511 chr02:012673511 0 W/12673511-12673511 FN1450-S Single Base Substitution T-C INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN185-2_3_4.SNP.2:12673957 chr02:012673957 0 W/12673957-12673957 FN185-2_3_4 SNP C -> T AC=1;AN=188;BQB=0.186806;DP=2605;DP4=1146,1414,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.22909e-06;MQSB=0.999999;RPB=0.413894;SGB=-36.4511;VDB=0.357527;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.2:12678767 chr02:012678767 0 W/12678767-12678767 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.956775;DP=3000;DP4=1400,1492,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000333333;MQB=6.95737e-09;MQSB=0.846621;RPB=0.947185;SGB=53.6492;VDB=0.205465;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.2:12678777 chr02:012678777 0 W/12678777-12678777 FN3838-S SNP T -> C AC=1;AN=190;BQB=0.938754;DP=3042;DP4=1449,1447,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000328731;MQB=1.68255e-09;MQSB=0.798077;RPB=0.983619;SGB=21.1058;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-S.SNP.2:12680934 chr02:012680934 0 W/12680934-12680934 FN1554-S Single Base Substitution C-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2247-S.SNP.2:12681443 chr02:012681443 0 W/12681443-12681443 FN2247-S SNP G -> A AC=2;AN=190;BQB=0.983893;DP=3503;DP4=2179,1065,22,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.0092e-12;MQSB=0.425544;RPB=0.893561;SGB=103.624;VDB=0.275394;EFF=INTERGENIC(MODIFIER||||||||||1) FN876-S.SNP.2:12681472 chr02:012681472 0 W/12681472-12681472 FN876-S Single Base Substitution C-T INTERGENIC HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN322-S.SNP.2:12688164 chr02:012688164 0 W/12688164-12688164 FN322-S Single Base Substitution C-G INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3486-S.SNP.2:12691714 chr02:012691714 0 W/12691714-12691714 FN3486-S SNP C -> A AC=1;AN=184;BQB=0.998094;DP=3175;DP4=1633,1429,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51534e-08;MQSB=0.882508;RPB=0.570145;SGB=62.3078;VDB=0.833309;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.2:12694695 chr02:012694695 0 W/12694695-12694695 FN4134-S SNP C -> T AC=2;AN=182;BQB=0.761169;DP=2713;DP4=1327,1262,11,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000737191;MQB=4.1562e-10;MQSB=0.933707;RPB=0.196195;SGB=89.2199;VDB=0.547387;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G184R|335|LOC_Os02g21390|protein_coding|CODING|LOC_Os02g21390.1|1|1) FN2080-S.SNP.2:12695254 chr02:012695254 0 W/12695254-12695254 FN2080-S SNP C -> T AC=1;AN=168;BQB=0.652508;DP=1486;DP4=838,599,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32775e-07;MQSB=0.432052;RPB=0.629306;SGB=29.4772;VDB=0.74949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.2:12703416 chr02:012703416 0 W/12703416-12703416 FN2137-S SNP T -> C AC=1;AN=168;BQB=0.0440239;DP=2679;DP4=1159,1483,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83404e-09;MQSB=0.633683;RPB=0.937429;SGB=-98.0622;VDB=0.276897;EFF=INTRON(MODIFIER||||1654|LOC_Os02g21400|protein_coding|CODING|LOC_Os02g21400.1|2|1) FN2119-S.SNP.2:12704511 chr02:012704511 0 W/12704511-12704511 FN2119-S SNP G -> A AC=1;AN=168;BQB=0.992726;DP=4031;DP4=2032,1954,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000248077;MQB=2.95874e-12;MQSB=0.748941;RPB=0.604455;SGB=-11.4952;VDB=0.0476992;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R250H|1654|LOC_Os02g21400|protein_coding|CODING|LOC_Os02g21400.1|4|1) FN4120-S.SNP.2:12706418 chr02:012706418 0 W/12706418-12706418 FN4120-S SNP A -> T AC=1;AN=182;BQB=0.3356;DP=2559;DP4=1330,1154,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00273544;MQB=3.28385e-06;MQSB=0.999;RPB=0.99766;SGB=46.1603;VDB=0.772599;EFF=INTRON(MODIFIER||||1654|LOC_Os02g21400|protein_coding|CODING|LOC_Os02g21400.1|6|1) FN3707-S.SNP.2:12708665 chr02:012708665 0 W/12708665-12708665 FN3707-S SNP A -> T AC=1;AN=190;BQB=0.190368;DP=2907;DP4=1329,1341,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00550396;MQB=0.00219719;MQSB=7.98046e-05;RPB=0.597331;SGB=-15.4375;VDB=0.974351;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K1318*|1654|LOC_Os02g21400|protein_coding|CODING|LOC_Os02g21400.1|8|1) FN2411.SNP.2:12711457 chr02:012711457 0 W/12711457-12711457 FN2411 SNP C -> T AC=2;AN=200;BQB=0.159352;DP=4067;DP4=1909,1835,26,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.697e-29;MQSB=0.96504;RPB=0.885358;SGB=124.159;VDB=0.906996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.2:12718861 chr02:012718861 0 W/12718861-12718861 FN2792-S SNP G -> A AC=1;AN=198;BQB=0.394643;DP=3587;DP4=1495,1876,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19294e-05;MQSB=0.204721;RPB=0.853773;SGB=36.5539;VDB=0.628816;EFF=INTERGENIC(MODIFIER||||||||||1) FN-47.SNP.2:12719670 chr02:012719670 0 W/12719670-12719670 FN-47 Single Base Substitution C-T INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN-409.SNP.2:12729460 chr02:012729460 0 W/12729460-12729460 FN-409 Single Base Substitution G-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. W607-2-1.SNP.2:12730099 chr02:012730099 0 W/12730099-12730099 W607-2-1 Single Base Substitution G-C INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN935-S.SNP.2:12730548 chr02:012730548 0 W/12730548-12730548 FN935-S Single Base Substitution C-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN-197.SNP.2:12730855 chr02:012730855 0 W/12730855-12730855 FN-197 Single Base Substitution C-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2481.SNP.2:12731435 chr02:012731435 0 W/12731435-12731435 FN2481 SNP C -> T AC=2;AN=200;BQB=0.999964;DP=4477;DP4=2186,1837,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000223364;MQB=1.01449e-20;MQSB=0.130889;RPB=0.339418;SGB=137.609;VDB=0.620175;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.2:12731435 chr02:012731435 0 W/12731435-12731435 FN373-S Single Base Substitution C-T INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2403.SNP.2:12743571 chr02:012743571 0 W/12743571-12743571 FN2403 SNP G -> A AC=1;AN=200;BQB=0.985627;DP=5276;DP4=2503,2446,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000379075;MQB=1.6264e-11;MQSB=0.993625;RPB=0.480171;SGB=-36.5;VDB=0.0309674;EFF=INTRON(MODIFIER||||451|LOC_Os02g21490|protein_coding|CODING|LOC_Os02g21490.1|2|1) FN4120-S.SNP.2:12746398 chr02:012746398 0 W/12746398-12746398 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.143107;DP=2845;DP4=1377,1393,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000581078;MQSB=0.0396183;RPB=0.905762;SGB=35.6277;VDB=0.935368;EFF=UTR_5_PRIME(MODIFIER||98||451|LOC_Os02g21490|protein_coding|CODING|LOC_Os02g21490.1|1|1) FN3863-S.SNP.2:12750261 chr02:012750261 0 W/12750261-12750261 FN3863-S SNP T -> C AC=1;AN=158;BQB=0.968232;DP=2413;DP4=1155,1178,13,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.9183e-11;MQSB=0.996956;RPB=0.882031;SGB=73.2838;VDB=0.0247088;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.2:12750398 chr02:012750398 0 W/12750398-12750398 FN701-S Single Base Substitution T-C INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2305.SNP.2:12750613 chr02:012750613 0 W/12750613-12750613 FN2305 SNP A -> T AC=1;AN=192;BQB=0.999731;DP=5097;DP4=2487,2346,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.80017e-05;MQSB=0.874731;RPB=0.600204;SGB=25.5227;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.2:12755498 chr02:012755498 0 W/12755498-12755498 FN1517-S Single Base Substitution C-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3566-S.SNP.2:12762266 chr02:012762266 0 W/12762266-12762266 FN3566-S SNP T -> A AC=1;AN=188;BQB=0.881562;DP=3565;DP4=1263,2061,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09119e-14;MQSB=0.997651;RPB=0.773866;SGB=16.3413;VDB=0.648036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.2:12764030 chr02:012764030 0 W/12764030-12764030 FN3506-S SNP T -> C AC=2;AN=188;BQB=0.765977;DP=2468;DP4=943,1061,11,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.64545e-12;MQSB=0.985042;RPB=0.678326;SGB=16.3413;VDB=0.56632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.2:12773810 chr02:012773810 0 W/12773810-12773810 FN3909-S SNP A -> G AC=1;AN=158;BQB=0.855533;DP=2234;DP4=1151,1001,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000447628;MQB=5.12175e-09;MQSB=0.936716;RPB=0.970887;SGB=37.4429;VDB=0.555212;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.2:12774159 chr02:012774159 0 W/12774159-12774159 FN_N1-202-3 Single Base Substitution A-T Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN869-S.SNP.2:12779420 chr02:012779420 0 W/12779420-12779420 FN869-S Single Base Substitution T-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN869-S.SNP.2:12779421 chr02:012779421 0 W/12779421-12779421 FN869-S Single Base Substitution T-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN570-S.SNP.2:12785058 chr02:012785058 0 W/12785058-12785058 FN570-S Single Base Substitution T-A INTERGENIC HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN570-S.SNP.2:12785078 chr02:012785078 0 W/12785078-12785078 FN570-S Single Base Substitution T-C INTERGENIC HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN891-S.SNP.2:12790139 chr02:012790139 0 W/12790139-12790139 FN891-S Single Base Substitution A-G INTRON HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN-265.SNP.2:12801457 chr02:012801457 0 W/12801457-12801457 FN-265 Single Base Substitution C-G INTRON HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1222-S.SNP.2:12808027 chr02:012808027 0 W/12808027-12808027 FN1222-S Single Base Substitution A-G INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN3516-S.SNP.2:12809382 chr02:012809382 0 W/12809382-12809382 FN3516-S SNP T -> C AC=1;AN=188;BQB=0.818722;DP=2418;DP4=1149,1190,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.62732e-08;MQSB=0.999847;RPB=0.917163;SGB=20.9896;VDB=0.691523;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.2:12820408 chr02:012820408 0 W/12820408-12820408 FN-296 Single Base Substitution G-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN1263-S.SNP.2:12821490 chr02:012821490 0 W/12821490-12821490 FN1263-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3547-S.SNP.2:12824368 chr02:012824368 0 W/12824368-12824368 FN3547-S SNP G -> T AC=1;AN=188;BQB=0.59674;DP=3005;DP4=1468,1451,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00266223;MQB=1.36123e-07;MQSB=0.872099;RPB=0.969137;SGB=39.5276;VDB=0.96723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E478D|1332|LOC_Os02g21590|protein_coding|CODING|LOC_Os02g21590.1|5|1) FN1657-S.SNP.2:12827055 chr02:012827055 0 W/12827055-12827055 FN1657-S Single Base Substitution G-A INTRON Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2602-S.SNP.2:12832860 chr02:012832860 0 W/12832860-12832860 FN2602-S SNP C -> G AC=1;AN=198;BQB=0.897194;DP=4405;DP4=2108,2138,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00136209;MQB=1.96931e-08;MQSB=0.974277;RPB=0.946187;SGB=29.3443;VDB=0.497199;EFF=INTRON(MODIFIER||||501|LOC_Os02g21600|protein_coding|CODING|LOC_Os02g21600.1|7|1) FN1674-S.SNP.2:12833640 chr02:012833640 0 W/12833640-12833640 FN1674-S SNP G -> A AC=1;AN=188;BQB=0.293591;DP=2700;DP4=1335,1333,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000192782;MQSB=0.996694;RPB=0.512127;SGB=18.4463;VDB=0.977821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.2:12834194 chr02:012834194 0 W/12834194-12834194 FN1468-S Single Base Substitution G-A INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1468-S.SNP.2:12834195 chr02:012834195 0 W/12834195-12834195 FN1468-S Single Base Substitution G-A INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1348-S.SNP.2:12837383 chr02:012837383 0 W/12837383-12837383 FN1348-S Single Base Substitution T-A INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2713-S.SNP.2:12837765 chr02:012837765 0 W/12837765-12837765 FN2713-S SNP C -> T AC=1;AN=200;BQB=0.806061;DP=4873;DP4=2190,2417,7,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00205212;MQB=1.63882e-06;MQSB=0.911796;RPB=0.550034;SGB=54.2646;VDB=0.533768;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.2:12838275 chr02:012838275 0 W/12838275-12838275 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.885199;DP=2893;DP4=1033,1753,11,19;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000345662;MQB=1.0118e-13;MQSB=2.34822e-09;RPB=0.15777;SGB=130.135;VDB=0.0133465;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.2:12840378 chr02:012840378 0 W/12840378-12840378 FN3571-S SNP C -> A AC=2;AN=188;BQB=0.858033;DP=2613;DP4=1232,1293,12,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.83155e-14;MQSB=0.652416;RPB=0.792126;SGB=85.5904;VDB=0.878374;EFF=INTRON(MODIFIER||||356|LOC_Os02g21620|protein_coding|CODING|LOC_Os02g21620.1|3|1) FN910-S.SNP.2:12840828 chr02:012840828 0 W/12840828-12840828 FN910-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g21620 retrotransposon protein, putative, unclassified, expressed SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2388.SNP.2:12845071 chr02:012845071 0 W/12845071-12845071 FN2388 SNP G -> A AC=2;AN=200;BQB=0.948647;DP=4353;DP4=2275,1814,29,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.61291e-35;MQSB=0.813169;RPB=0.331273;SGB=251.042;VDB=0.209093;EFF=INTRON(MODIFIER||||356|LOC_Os02g21620|protein_coding|CODING|LOC_Os02g21620.1|1|1) FN_N1-220-1.SNP.2:12847805 chr02:012847805 0 W/12847805-12847805 FN_N1-220-1 Single Base Substitution A-G HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN-181.SNP.2:12848142 chr02:012848142 0 W/12848142-12848142 FN-181 Single Base Substitution A-G INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN918-S.SNP.2:12871789 chr02:012871789 0 W/12871789-12871789 FN918-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g21660 L1P family of ribosomal proteins domain containing protein, expressed SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-133.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN-133 Single Base Substitution C-T INTERGENIC HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-207.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN-207 Single Base Substitution C-T INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-338.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN-338 Single Base Substitution C-T INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-5.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN-5 Single Base Substitution C-T INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN1573-S.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN1573-S Single Base Substitution C-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2172-S.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN2172-S SNP C -> T AC=2;AN=168;BQB=5.70622e-07;DP=2206;DP4=1107,748,31,9;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=0.000297611;MQSB=0.0038263;RPB=0.374094;SGB=-168.39;VDB=0.013078;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN230-S Single Base Substitution C-T INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN713-S.SNP.2:12881435 chr02:012881435 0 W/12881435-12881435 FN713-S Single Base Substitution C-T INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2138-S.SNP.2:12884109 chr02:012884109 0 W/12884109-12884109 FN2138-S SNP C -> T AC=1;AN=168;BQB=0.363003;DP=4519;DP4=2342,2115,18,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.25477e-16;MQSB=0.96287;RPB=0.664386;SGB=-169.317;VDB=0.17525;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.2:12886235 chr02:012886235 0 W/12886235-12886235 FN751-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g21680 expressed protein SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN1033-S.SNP.2:12887160 chr02:012887160 0 W/12887160-12887160 FN1033-S Single Base Substitution G-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN480-S.SNP.2:12888090 chr02:012888090 0 W/12888090-12888090 FN480-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g21685 expressed protein SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1556-S.SNP.2:12888972 chr02:012888972 0 W/12888972-12888972 FN1556-S Single Base Substitution A-G INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2704-S.SNP.2:12893095 chr02:012893095 0 W/12893095-12893095 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.177529;DP=4978;DP4=2175,2435,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.72203e-14;MQSB=0.798655;RPB=0.281069;SGB=50.3263;VDB=0.57186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.2:12893096 chr02:012893096 0 W/12893096-12893096 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.757799;DP=4972;DP4=2303,2383,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.67446e-14;MQSB=0.781169;RPB=0.335731;SGB=72.7161;VDB=0.61122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.2:12905459 chr02:012905459 0 W/12905459-12905459 FN3554-S SNP A -> G AC=1;AN=188;BQB=0.78984;DP=2502;DP4=1178,1255,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.11572e-07;MQSB=0.970448;RPB=0.947322;SGB=18.4463;VDB=0.311296;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.2:12908742 chr02:012908742 0 W/12908742-12908742 FN1307-S Single Base Substitution A-G INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN3050-S.SNP.2:12911043 chr02:012911043 0 W/12911043-12911043 FN3050-S SNP G -> T AC=2;AN=184;BQB=0.947959;DP=2883;DP4=1339,1458,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.42933e-15;MQSB=0.573471;RPB=0.948818;SGB=81.5311;VDB=0.580607;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q399K|963|LOC_Os02g21720|protein_coding|CODING|LOC_Os02g21720.1|3|1) FN2711-S.SNP.2:12913779 chr02:012913779 0 W/12913779-12913779 FN2711-S SNP T -> C AC=1;AN=200;BQB=0.999595;DP=3677;DP4=1840,1536,5,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000271961;MQB=0.00123774;MQSB=0.950471;RPB=0.330391;SGB=15.0344;VDB=0.321601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.2:12917374 chr02:012917374 0 W/12917374-12917374 FN-384 Single Base Substitution C-A INTRON HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. W313-1-1-1-1.SNP.2:12923646 chr02:012923646 0 W/12923646-12923646 W313-1-1-1-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3626-S.SNP.2:12927066 chr02:012927066 0 W/12927066-12927066 FN3626-S SNP T -> A AC=1;AN=190;BQB=0.308489;DP=2987;DP4=1507,1301,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000321439;MQSB=0.901336;RPB=0.948742;SGB=-2.10437;VDB=0.795237;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctT|L132|788|LOC_Os02g21750|protein_coding|CODING|LOC_Os02g21750.1|3|1) FN2407.SNP.2:12927634 chr02:012927634 0 W/12927634-12927634 FN2407 SNP A -> G AC=2;AN=200;BQB=0.053046;DP=4766;DP4=2242,2180,30,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17767e-28;MQSB=0.999996;RPB=0.616026;SGB=159.24;VDB=0.177482;EFF=INTRON(MODIFIER||||788|LOC_Os02g21750|protein_coding|CODING|LOC_Os02g21750.1|1|1) FN4101-S.SNP.2:12933344 chr02:012933344 0 W/12933344-12933344 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.441278;DP=3130;DP4=1366,1697,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.42039e-06;MQSB=0.986914;RPB=0.351935;SGB=44.1115;VDB=0.496362;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.2:12941501 chr02:012941501 0 W/12941501-12941501 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.977119;DP=2959;DP4=1566,1296,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.88557e-09;MQSB=0.788838;RPB=0.171774;SGB=53.2642;VDB=0.361517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.2:12941508 chr02:012941508 0 W/12941508-12941508 FN3448-S SNP G -> T AC=1;AN=184;BQB=0.964555;DP=2943;DP4=1548,1291,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97897e-09;MQSB=0.717654;RPB=0.21253;SGB=57.786;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.2:12945562 chr02:012945562 0 W/12945562-12945562 FN3331-S SNP C -> T AC=2;AN=184;BQB=0.945692;DP=2994;DP4=1626,1257,16,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.95612e-15;MQSB=0.984175;RPB=0.495562;SGB=95.6183;VDB=0.290631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P272S|424|LOC_Os02g21780|protein_coding|CODING|LOC_Os02g21780.1|1|1) FN-211.SNP.2:12950323 chr02:012950323 0 W/12950323-12950323 FN-211 Single Base Substitution A-C INTERGENIC HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2680-S.SNP.2:12955740 chr02:012955740 0 W/12955740-12955740 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.937877;DP=4802;DP4=2407,2151,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53008e-10;MQSB=0.818422;RPB=0.0980228;SGB=-13.1102;VDB=0.308786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.2:12960704 chr02:012960704 0 W/12960704-12960704 FN3353-S SNP T -> A AC=1;AN=184;BQB=0.937309;DP=3206;DP4=1508,1565,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45547e-08;MQSB=0.869565;RPB=0.972299;SGB=28.3187;VDB=0.554656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.2:12964038 chr02:012964038 0 W/12964038-12964038 FN3362-S SNP A -> T AC=1;AN=184;BQB=0.956847;DP=2803;DP4=1455,1228,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35813e-11;MQSB=0.995911;RPB=0.661433;SGB=80.3949;VDB=0.615901;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.2:12964628 chr02:012964628 0 W/12964628-12964628 FN734-S Single Base Substitution G-A INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1032-S.SNP.2:12968598 chr02:012968598 0 W/12968598-12968598 FN1032-S Single Base Substitution T-C INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2233-S.SNP.2:12968598 chr02:012968598 0 W/12968598-12968598 FN2233-S SNP T -> C AC=2;AN=190;BQB=0.358055;DP=4730;DP4=2215,2287,9,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000211416;MQB=5.477e-14;MQSB=0.977876;RPB=0.978646;SGB=59.414;VDB=0.838287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.2:12970496 chr02:012970496 0 W/12970496-12970496 FN-336 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g21810 cytochrome P450 51, putative, expressed SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN737-S.SNP.2:12977067 chr02:012977067 0 W/12977067-12977067 FN737-S Single Base Substitution G-A INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN3852-S.SNP.2:12979946 chr02:012979946 0 W/12979946-12979946 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.83432;DP=2370;DP4=1186,1112,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=4.85304e-08;MQSB=0.0443364;RPB=0.835207;SGB=73.2838;VDB=0.833073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A20V|1020|LOC_Os02g21840|protein_coding|CODING|LOC_Os02g21840.1|1|1) FN3366-S.SNP.2:12982496 chr02:012982496 0 W/12982496-12982496 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.960985;DP=3586;DP4=1538,1927,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58017e-12;MQSB=0.996063;RPB=0.444709;SGB=93.9603;VDB=0.191656;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T555|1020|LOC_Os02g21840|protein_coding|CODING|LOC_Os02g21840.1|3|1) FN2423.SNP.2:12983672 chr02:012983672 0 W/12983672-12983672 FN2423 SNP G -> C AC=1;AN=200;BQB=0.942354;DP=3762;DP4=1874,1641,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18631e-06;MQSB=0.950862;RPB=0.619532;SGB=16.4591;VDB=0.70085;EFF=INTRON(MODIFIER||||1020|LOC_Os02g21840|protein_coding|CODING|LOC_Os02g21840.1|3|1) FN2305.SNP.2:12985286 chr02:012985286 0 W/12985286-12985286 FN2305 SNP A -> T AC=1;AN=192;BQB=0.482741;DP=4949;DP4=2706,1801,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.01612e-13;MQSB=0.999689;RPB=0.916677;SGB=89.6809;VDB=0.50601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.2:13001946 chr02:013001946 0 W/13001946-13001946 FN3572-S SNP G -> A AC=2;AN=188;BQB=0.910548;DP=2816;DP4=1269,1400,18,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.72926e-22;MQSB=0.996369;RPB=0.936616;SGB=154.316;VDB=0.119269;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.2:13004147 chr02:013004147 0 W/13004147-13004147 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.963303;DP=2416;DP4=1134,1182,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.13956e-05;MQSB=0.921437;RPB=0.95751;SGB=23.9652;VDB=0.324775;EFF=INTRON(MODIFIER||||136|LOC_Os02g21870|protein_coding|CODING|LOC_Os02g21870.1|2|1) FN2781-S.SNP.2:13004294 chr02:013004294 0 W/13004294-13004294 FN2781-S SNP G -> C AC=1;AN=198;BQB=0.744951;DP=4048;DP4=1904,1893,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.63661e-12;MQSB=0.928892;RPB=0.182658;SGB=50.1053;VDB=0.302108;EFF=INTRON(MODIFIER||||136|LOC_Os02g21870|protein_coding|CODING|LOC_Os02g21870.1|2|1) FN2422.SNP.2:13007584 chr02:013007584 0 W/13007584-13007584 FN2422 SNP A -> T AC=2;AN=200;BQB=0.50007;DP=4522;DP4=2016,2139,20,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.50845e-18;MQSB=0.877547;RPB=0.945441;SGB=108.768;VDB=0.169887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I47F|310|LOC_Os02g21880|protein_coding|CODING|LOC_Os02g21880.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I47F|196|LOC_Os02g21880|protein_coding|CODING|LOC_Os02g21880.2|3|1) FN2104-S.SNP.2:13016683 chr02:013016683 0 W/13016683-13016683 FN2104-S SNP A -> T AC=1;AN=168;BQB=0.0281122;DP=3522;DP4=1804,1683,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54838e-05;MQSB=0.998454;RPB=0.392118;SGB=-57.0838;VDB=0.302784;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.2:13021383 chr02:013021383 0 W/13021383-13021383 FN3940-S SNP G -> A AC=1;AN=158;BQB=0.302464;DP=2457;DP4=1222,1157,14,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.57468e-10;MQSB=0.881224;RPB=0.99982;SGB=64.3985;VDB=0.854347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.2:13026189 chr02:013026189 0 W/13026189-13026189 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.530308;DP=2686;DP4=1339,1249,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.44856e-08;MQSB=0.988027;RPB=0.759468;SGB=57.244;VDB=0.765338;EFF=INTRON(MODIFIER||||100|LOC_Os02g21900|protein_coding|CODING|LOC_Os02g21900.1|2|1) FN404-S.SNP.2:13027569 chr02:013027569 0 W/13027569-13027569 FN404-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g21910 hypothetical protein SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3639-S.SNP.2:13038327 chr02:013038327 0 W/13038327-13038327 FN3639-S SNP T -> C AC=2;AN=190;BQB=0.731359;DP=3006;DP4=1194,1604,14,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.00778e-14;MQSB=0.99917;RPB=0.32801;SGB=144.727;VDB=0.768269;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.2:13038481 chr02:013038481 0 W/13038481-13038481 FN553-S Single Base Substitution A-G INTERGENIC HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN872-S.SNP.2:13040621 chr02:013040621 0 W/13040621-13040621 FN872-S Single Base Substitution G-C INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3396-S.SNP.2:13040696 chr02:013040696 0 W/13040696-13040696 FN3396-S SNP C -> G AC=1;AN=184;BQB=0.828658;DP=2796;DP4=1113,1618,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38126e-09;MQSB=0.998661;RPB=0.623219;SGB=57.786;VDB=0.715481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.2:13058467 chr02:013058467 0 W/13058467-13058467 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.629384;DP=4211;DP4=1856,2142,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68488e-08;MQSB=0.9839;RPB=0.446582;SGB=4.56404;VDB=0.341481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.2:13060267 chr02:013060267 0 W/13060267-13060267 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.938331;DP=3071;DP4=1733,1218,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19544e-08;MQSB=0.920987;RPB=0.984596;SGB=53.6492;VDB=0.515483;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G170|419|LOC_Os02g21970|protein_coding|CODING|LOC_Os02g21970.1|2|1) FN4093-S.SNP.2:13068550 chr02:013068550 0 W/13068550-13068550 FN4093-S SNP A -> G AC=1;AN=180;BQB=0.985691;DP=2741;DP4=1455,1219,12,6;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=1.12585e-11;MQSB=0.992343;RPB=0.964985;SGB=75.6874;VDB=0.436022;EFF=INTRON(MODIFIER||||698|LOC_Os02g21980|protein_coding|CODING|LOC_Os02g21980.1|9|1) FN3761-S.SNP.2:13077285 chr02:013077285 0 W/13077285-13077285 FN3761-S SNP C -> T AC=1;AN=190;BQB=0.873334;DP=3038;DP4=1193,1746,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0572745;MQB=0.0819805;MQSB=0.681709;RPB=0.0827616;SGB=49.0954;VDB=0.229729;EFF=INTRON(MODIFIER||||94|LOC_Os02g21990|protein_coding|CODING|LOC_Os02g21990.1|1|1) FN829-S.SNP.2:13078590 chr02:013078590 0 W/13078590-13078590 FN829-S Single Base Substitution C-T INTERGENIC HOMO SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2284.SNP.2:13086238 chr02:013086238 0 W/13086238-13086238 FN2284 SNP G -> A AC=1;AN=192;BQB=0.566835;DP=5205;DP4=2384,2392,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.06208e-16;MQSB=0.711047;RPB=0.930116;SGB=-7.43215;VDB=0.673308;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.2:13090400 chr02:013090400 0 W/13090400-13090400 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN510-S.SNP.2:13091067 chr02:013091067 0 W/13091067-13091067 FN510-S Single Base Substitution G-A INTERGENIC HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2450.SNP.2:13093780 chr02:013093780 0 W/13093780-13093780 FN2450 SNP C -> T AC=1;AN=200;BQB=0.0683805;DP=4805;DP4=2284,2175,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.66701e-10;MQSB=0.952779;RPB=0.48498;SGB=26.8797;VDB=0.120349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.2:13112261 chr02:013112261 0 W/13112261-13112261 FN2464 SNP A -> G AC=1;AN=200;BQB=0.818788;DP=4559;DP4=2199,2014,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.31324e-11;MQSB=0.582451;RPB=0.99948;SGB=69.1109;VDB=0.891805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M750T|766|LOC_Os02g22050|protein_coding|CODING|LOC_Os02g22050.1|4|1) FN2347.SNP.2:13113413 chr02:013113413 0 W/13113413-13113413 FN2347 SNP G -> A AC=2;AN=192;BQB=0.419944;DP=4511;DP4=2198,1944,27,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.57738e-24;MQSB=0.762463;RPB=0.701519;SGB=175.225;VDB=0.999141;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R384*|766|LOC_Os02g22050|protein_coding|CODING|LOC_Os02g22050.1|3|1);LOF=(LOC_Os02g22050|LOC_Os02g22050|1|1.00);NMD=(LOC_Os02g22050|LOC_Os02g22050|1|1.00) FN3592-S.SNP.2:13113701 chr02:013113701 0 W/13113701-13113701 FN3592-S SNP C -> A AC=1;AN=188;BQB=0.949206;DP=3804;DP4=1864,1861,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.14931e-07;MQSB=0.000407307;RPB=0.997701;SGB=67.1521;VDB=0.271923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A288S|766|LOC_Os02g22050|protein_coding|CODING|LOC_Os02g22050.1|3|1) FN-213.SNP.2:13116223 chr02:013116223 0 W/13116223-13116223 FN-213 Single Base Substitution C-T INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3575-S.SNP.2:13123691 chr02:013123691 0 W/13123691-13123691 FN3575-S SNP C -> T AC=1;AN=188;BQB=0.63258;DP=2640;DP4=1275,1305,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.46919e-05;MQSB=0.961978;RPB=0.326198;SGB=28.8977;VDB=0.3409;EFF=INTRON(MODIFIER||||281|LOC_Os02g22060|protein_coding|CODING|LOC_Os02g22060.1|3|1) FN3771-S.SNP.2:13126725 chr02:013126725 0 W/13126725-13126725 FN3771-S SNP G -> A AC=1;AN=190;BQB=0.975312;DP=2581;DP4=898,1581,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.51681e-05;MQSB=0.847778;RPB=0.597707;SGB=21.8853;VDB=0.124207;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L14|281|LOC_Os02g22060|protein_coding|CODING|LOC_Os02g22060.1|1|1) FN-264.SNP.2:13132432 chr02:013132432 0 W/13132432-13132432 FN-264 Single Base Substitution T-A UTR_3_PRIME HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-88.SNP.2:13134425 chr02:013134425 0 W/13134425-13134425 FN-88 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN3496-S.SNP.2:13138443 chr02:013138443 0 W/13138443-13138443 FN3496-S SNP C -> A AC=2;AN=188;BQB=0.919986;DP=2839;DP4=1212,1570,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.87295e-13;MQSB=0.956983;RPB=0.193655;SGB=103.498;VDB=0.0175307;EFF=UTR_5_PRIME(MODIFIER||2077||57|LOC_Os02g22084|protein_coding|CODING|LOC_Os02g22084.1|2|1),UTR_5_PRIME(MODIFIER||2077||57|LOC_Os02g22084|protein_coding|CODING|LOC_Os02g22084.2|2|1) FN1315-S.SNP.2:13138667 chr02:013138667 0 W/13138667-13138667 FN1315-S Single Base Substitution C-T INTRON HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN873-S.SNP.2:13141550 chr02:013141550 0 W/13141550-13141550 FN873-S Single Base Substitution G-A INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN4020-S.SNP.2:13145295 chr02:013145295 0 W/13145295-13145295 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.892925;DP=3056;DP4=1564,1360,5,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.86359e-09;MQSB=0.56046;RPB=0.311325;SGB=83.1885;VDB=0.649024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T110I|1424|LOC_Os02g22090|protein_coding|CODING|LOC_Os02g22090.1|1|1) FN793-S.SNP.2:13147552 chr02:013147552 0 W/13147552-13147552 FN793-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g22090 pattern formation protein EMB30, putative, expressed SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3353-S.SNP.2:13148658 chr02:013148658 0 W/13148658-13148658 FN3353-S SNP T -> A AC=1;AN=184;BQB=0.99686;DP=2862;DP4=1548,1232,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19504e-06;MQSB=0.986478;RPB=0.198819;SGB=48.7425;VDB=0.0611937;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T1122|1424|LOC_Os02g22090|protein_coding|CODING|LOC_Os02g22090.1|2|1) FN689-S.SNP.2:13150437 chr02:013150437 0 W/13150437-13150437 FN689-S Single Base Substitution G-A INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. W577-3-1.SNP.2:13163158 chr02:013163158 0 W/13163158-13163158 W577-3-1 Single Base Substitution G-T INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2751-S.SNP.2:13174591 chr02:013174591 0 W/13174591-13174591 FN2751-S SNP G -> T AC=2;AN=200;BQB=0.457951;DP=5183;DP4=2563,2347,21,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.53242e-22;MQSB=0.999855;RPB=0.911032;SGB=73.7728;VDB=0.598016;EFF=INTRON(MODIFIER||||165|LOC_Os02g22130|protein_coding|CODING|LOC_Os02g22130.1|2|1) FN2751-S.SNP.2:13174592 chr02:013174592 0 W/13174592-13174592 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.837003;DP=5187;DP4=2630,2215,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.89137e-22;MQSB=0.992419;RPB=0.889651;SGB=73.7728;VDB=0.506951;EFF=INTRON(MODIFIER||||165|LOC_Os02g22130|protein_coding|CODING|LOC_Os02g22130.1|2|1) FN684-S.SNP.2:13178508 chr02:013178508 0 W/13178508-13178508 FN684-S Single Base Substitution A-T INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1061-S.SNP.2:13184747 chr02:013184747 0 W/13184747-13184747 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1034-S.SNP.2:13191157 chr02:013191157 0 W/13191157-13191157 FN1034-S Single Base Substitution G-A INTERGENIC HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN-110.SNP.2:13197278 chr02:013197278 0 W/13197278-13197278 FN-110 Single Base Substitution T-C INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3791-S.SNP.2:13210662 chr02:013210662 0 W/13210662-13210662 FN3791-S SNP C -> T AC=1;AN=190;BQB=0.757455;DP=2582;DP4=1233,1232,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000184831;MQSB=0.999613;RPB=0.270097;SGB=39.9877;VDB=0.467235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P197L|799|LOC_Os02g22180|protein_coding|CODING|LOC_Os02g22180.1|2|1) FN1678-S.SNP.2:13215596 chr02:013215596 0 W/13215596-13215596 FN1678-S SNP C -> T AC=2;AN=188;BQB=0.940485;DP=2537;DP4=1331,1159,9,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.63599e-12;MQSB=0.874365;RPB=0.835435;SGB=64.3306;VDB=0.813745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.2:13222368 chr02:013222368 0 W/13222368-13222368 FN3694-S SNP A -> G AC=1;AN=190;BQB=0.453674;DP=3063;DP4=1605,1348,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.46237e-05;MQSB=0.355501;RPB=0.863749;SGB=1.00337;VDB=0.375586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.2:13226640 chr02:013226640 0 W/13226640-13226640 FN3492-S SNP C -> T AC=1;AN=184;BQB=0.593378;DP=2763;DP4=1327,1331,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.28862e-08;MQSB=0.847108;RPB=0.47591;SGB=20.7533;VDB=0.780064;EFF=INTRON(MODIFIER||||554|LOC_Os02g22190|protein_coding|CODING|LOC_Os02g22190.1|3|1) FN1493-S.SNP.2:13232835 chr02:013232835 0 W/13232835-13232835 FN1493-S Single Base Substitution G-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2785-S.SNP.2:13241345 chr02:013241345 0 W/13241345-13241345 FN2785-S SNP T -> A AC=1;AN=198;BQB=0.645538;DP=4063;DP4=1968,1808,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.34904e-14;MQSB=0.896599;RPB=0.851861;SGB=15.7299;VDB=0.634644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.2:13241346 chr02:013241346 0 W/13241346-13241346 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.990603;DP=4062;DP4=1949,1868,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.41624e-12;MQSB=0.917236;RPB=0.54673;SGB=61.7198;VDB=0.772849;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.2:13245934 chr02:013245934 0 W/13245934-13245934 FN1188-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN921-S.SNP.2:13249048 chr02:013249048 0 W/13249048-13249048 FN921-S Single Base Substitution T-C INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN2435.SNP.2:13250750 chr02:013250750 0 W/13250750-13250750 FN2435 SNP G -> A AC=2;AN=200;BQB=0.0416907;DP=2309;DP4=500,1327,13,24;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000866176;MQB=3.03585e-08;MQSB=2.00607e-28;RPB=0.516754;SGB=-44.2787;VDB=0.660108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.2:13256266 chr02:013256266 0 W/13256266-13256266 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.935873;DP=2550;DP4=1331,1136,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26638e-12;MQSB=0.711016;RPB=0.455746;SGB=98.4821;VDB=0.284489;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.2:13265423 chr02:013265423 0 W/13265423-13265423 FN1440-S Single Base Substitution C-G INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2665-S.SNP.2:13273669 chr02:013273669 0 W/13273669-13273669 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.969638;DP=4979;DP4=2368,2372,11,15;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0228962;MQB=0.103298;MQSB=0.179588;RPB=0.966376;SGB=52.9314;VDB=0.621295;EFF=INTERGENIC(MODIFIER||||||||||1) FN-31.SNP.2:13280741 chr02:013280741 0 W/13280741-13280741 FN-31 Single Base Substitution A-G INTERGENIC HET SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. W138-2-1.SNP.2:13290912 chr02:013290912 0 W/13290912-13290912 W138-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3833-S.SNP.2:13291313 chr02:013291313 0 W/13291313-13291313 FN3833-S SNP A -> T AC=1;AN=190;BQB=0.935609;DP=2503;DP4=1363,1040,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.0589e-07;MQSB=0.999999;RPB=0.892315;SGB=44.5415;VDB=0.518745;EFF=INTRON(MODIFIER||||217|LOC_Os02g22260|protein_coding|CODING|LOC_Os02g22260.2|4|1),INTRON(MODIFIER||||287|LOC_Os02g22260|protein_coding|CODING|LOC_Os02g22260.1|4|1) FN912-S.SNP.2:13293737 chr02:013293737 0 W/13293737-13293737 FN912-S Single Base Substitution C-T INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN3687-S.SNP.2:13294302 chr02:013294302 0 W/13294302-13294302 FN3687-S SNP T -> C AC=2;AN=190;BQB=0.998876;DP=2884;DP4=1531,1229,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.70447e-20;MQSB=0.999868;RPB=0.359034;SGB=103.624;VDB=0.0920787;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.2:13300538 chr02:013300538 0 W/13300538-13300538 FN1371-S Single Base Substitution C-T INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN1119-S.SNP.2:13306971 chr02:013306971 0 W/13306971-13306971 FN1119-S Single Base Substitution A-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN499-S.SNP.2:13309377 chr02:013309377 0 W/13309377-13309377 FN499-S Single Base Substitution G-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN499-S.SNP.2:13309378 chr02:013309378 0 W/13309378-13309378 FN499-S Single Base Substitution G-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. W276-2-1.SNP.2:13310651 chr02:013310651 0 W/13310651-13310651 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2372.SNP.2:13316313 chr02:013316313 0 W/13316313-13316313 FN2372 SNP T -> C AC=1;AN=192;BQB=0.278891;DP=5165;DP4=2426,2360,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.4669e-10;MQSB=0.771255;RPB=0.849313;SGB=-73.1147;VDB=0.540139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.2:13316620 chr02:013316620 0 W/13316620-13316620 FN2233-S SNP T -> C AC=1;AN=190;BQB=0.95251;DP=5301;DP4=2850,2038,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85985e-05;MQSB=0.713768;RPB=0.996177;SGB=10.8904;VDB=0.337328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.2:13316661 chr02:013316661 0 W/13316661-13316661 FN3451-S SNP T -> G AC=1;AN=184;BQB=0.98405;DP=2749;DP4=1431,1188,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.8817e-06;MQSB=0.930604;RPB=0.933201;SGB=21.6609;VDB=0.484206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.2:13322237 chr02:013322237 0 W/13322237-13322237 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.89749;DP=3305;DP4=1644,1542,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.90075e-07;MQSB=0.999923;RPB=0.767494;SGB=39.699;VDB=0.317028;EFF=INTRON(MODIFIER||||222|LOC_Os02g22290|protein_coding|CODING|LOC_Os02g22290.1|2|1) FN759-S.SNP.2:13329981 chr02:013329981 0 W/13329981-13329981 FN759-S Single Base Substitution A-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2450.SNP.2:13357567 chr02:013357567 0 W/13357567-13357567 FN2450 SNP G -> T AC=2;AN=200;BQB=0.992109;DP=3940;DP4=1975,1768,10,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.70908e-17;MQSB=0.823223;RPB=0.965764;SGB=90.7419;VDB=0.196725;EFF=INTRON(MODIFIER||||717|LOC_Os02g22370|protein_coding|CODING|LOC_Os02g22370.1|9|1),INTRON(MODIFIER||||714|LOC_Os02g22370|protein_coding|CODING|LOC_Os02g22370.2|9|1),INTRON(MODIFIER||||499|LOC_Os02g22370|protein_coding|CODING|LOC_Os02g22370.3|9|1) FN2789-S.SNP.2:13362033 chr02:013362033 0 W/13362033-13362033 FN2789-S SNP G -> A AC=2;AN=198;BQB=0.852738;DP=4234;DP4=2087,1924,15,19;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.00236183;MQB=7.12283e-11;MQSB=0.0041343;RPB=0.482416;SGB=150.641;VDB=0.759829;EFF=INTRON(MODIFIER||||71|LOC_Os02g22374|protein_coding|CODING|LOC_Os02g22374.3|4|1),INTRON(MODIFIER||||74|LOC_Os02g22374|protein_coding|CODING|LOC_Os02g22374.1|4|1) FN2224-S.SNP.2:13366986 chr02:013366986 0 W/13366986-13366986 FN2224-S SNP G -> A AC=2;AN=190;BQB=0.828274;DP=5167;DP4=2670,2033,34,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.40402e-32;MQSB=0.964395;RPB=0.595706;SGB=210.241;VDB=0.825647;EFF=INTERGENIC(MODIFIER||||||||||1) FN977-S.SNP.2:13367828 chr02:013367828 0 W/13367828-13367828 FN977-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN3496-S.SNP.2:13375907 chr02:013375907 0 W/13375907-13375907 FN3496-S SNP C -> G AC=2;AN=188;BQB=0.982535;DP=2800;DP4=1333,1382,10,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.45036e-12;MQSB=0.999284;RPB=0.943331;SGB=94.4119;VDB=0.0372564;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||343|LOC_Os02g22390|protein_coding|CODING|LOC_Os02g22390.1|4|1),INTRON(MODIFIER||||343|LOC_Os02g22390|protein_coding|CODING|LOC_Os02g22390.1|3|1);LOF=(LOC_Os02g22390|LOC_Os02g22390|1|1.00) FN3382-S.SNP.2:13386087 chr02:013386087 0 W/13386087-13386087 FN3382-S SNP G -> A AC=2;AN=184;BQB=0.897182;DP=4327;DP4=2123,2049,12,24;HOB=0.0215028;ICB=0.494625;MQ=31;MQ0F=0.12942;MQB=0.169144;MQSB=0;RPB=0.91145;SGB=76.2326;VDB=0.405232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M198I|1092|LOC_Os02g22410|protein_coding|CODING|LOC_Os02g22410.1|2|1) FN849-S.SNP.2:13386087 chr02:013386087 0 W/13386087-13386087 FN849-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g22410 retrotransposon protein, putative, unclassified, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN937-S.SNP.2:13390668 chr02:013390668 0 W/13390668-13390668 FN937-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g22420 retrotransposon protein, putative, unclassified, expressed SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN4090-S.SNP.2:13412720 chr02:013412720 0 W/13412720-13412720 FN4090-S SNP C -> A AC=2;AN=182;BQB=0.657326;DP=2805;DP4=1419,1313,9,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.86512e-10;MQSB=0.99997;RPB=0.754366;SGB=89.2199;VDB=0.692287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D245Y|502|LOC_Os02g22460|protein_coding|CODING|LOC_Os02g22460.1|4|1) FN1134-S.SNP.2:13413783 chr02:013413783 0 W/13413783-13413783 FN1134-S Single Base Substitution C-G INTRON HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN_N1-116-1.SNP.2:13413948 chr02:013413948 0 W/13413948-13413948 FN_N1-116-1 Single Base Substitution C-T Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1485-S.SNP.2:13424671 chr02:013424671 0 W/13424671-13424671 FN1485-S Single Base Substitution C-T INTRON HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2554-S.SNP.2:13427379 chr02:013427379 0 W/13427379-13427379 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.259248;DP=4126;DP4=1947,1958,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000727096;MQB=3.38654e-12;MQSB=0.539397;RPB=0.968996;SGB=44.9151;VDB=0.551637;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.2:13430377 chr02:013430377 0 W/13430377-13430377 FN703-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g22500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN4187-S.SNP.2:13437085 chr02:013437085 0 W/13437085-13437085 FN4187-S SNP C -> T AC=2;AN=170;BQB=0.994763;DP=2665;DP4=1329,1269,17,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20028e-15;MQSB=0.398849;RPB=0.992967;SGB=114.512;VDB=0.805254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1362H|1495|LOC_Os02g22520|protein_coding|CODING|LOC_Os02g22520.1|2|1) FN3451-S.SNP.2:13440202 chr02:013440202 0 W/13440202-13440202 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.929194;DP=3379;DP4=1708,1582,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000295946;MQB=1.81442e-08;MQSB=0.95337;RPB=0.162355;SGB=57.786;VDB=0.615911;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G348E|1495|LOC_Os02g22520|protein_coding|CODING|LOC_Os02g22520.1|1|1) FN2711-S.SNP.2:13441847 chr02:013441847 0 W/13441847-13441847 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.546202;DP=4360;DP4=1964,2147,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.83016e-12;MQSB=0.866634;RPB=0.486265;SGB=39.9056;VDB=0.0338809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A182S|298|LOC_Os02g22530|protein_coding|CODING|LOC_Os02g22530.1|1|1) FN1424-S.SNP.2:13443025 chr02:013443025 0 W/13443025-13443025 FN1424-S Single Base Substitution G-A INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN-38.SNP.2:13455191 chr02:013455191 0 W/13455191-13455191 FN-38 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN2321.SNP.2:13459195 chr02:013459195 0 W/13459195-13459195 FN2321 SNP A -> G AC=2;AN=192;BQB=0.837646;DP=5184;DP4=2298,2552,21,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000192901;MQB=2.9981e-24;MQSB=0.99036;RPB=0.654565;SGB=100.716;VDB=0.282309;EFF=INTRON(MODIFIER||||1506|LOC_Os02g22570|protein_coding|CODING|LOC_Os02g22570.1|7|1) FN_552-1-1.SNP.2:13461422 chr02:013461422 0 W/13461422-13461422 FN_552-1-1 Single Base Substitution C-T HET LOC_Os02g22570 retrotransposon protein, putative, unclassified, expressed SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN2774-S.SNP.2:13467174 chr02:013467174 0 W/13467174-13467174 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.179083;DP=4021;DP4=1784,1966,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.66287e-13;MQSB=0.999553;RPB=0.552917;SGB=86.3098;VDB=0.481389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.2:13473625 chr02:013473625 0 W/13473625-13473625 FN3795-S SNP G -> C AC=1;AN=190;BQB=0.965439;DP=2618;DP4=1150,1381,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.54127e-05;MQSB=0.937825;RPB=0.994789;SGB=35.4339;VDB=0.151038;EFF=INTERGENIC(MODIFIER||||||||||1) FN967-S.SNP.2:13475455 chr02:013475455 0 W/13475455-13475455 FN967-S Single Base Substitution G-C INTRON HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN420-S.SNP.2:13483705 chr02:013483705 0 W/13483705-13483705 FN420-S Single Base Substitution G-A INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN-226.SNP.2:13483992 chr02:013483992 0 W/13483992-13483992 FN-226 Single Base Substitution T-C INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN369-S.SNP.2:13485243 chr02:013485243 0 W/13485243-13485243 FN369-S Single Base Substitution T-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN-207.SNP.2:13486303 chr02:013486303 0 W/13486303-13486303 FN-207 Single Base Substitution G-A INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3852-S.SNP.2:13487397 chr02:013487397 0 W/13487397-13487397 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.999294;DP=1991;DP4=1047,842,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.93907e-05;MQSB=0.677259;RPB=0.328931;SGB=23.9652;VDB=0.380974;EFF=INTRON(MODIFIER||||181|LOC_Os02g22630|protein_coding|CODING|LOC_Os02g22630.1|2|1) FN2375.SNP.2:13489378 chr02:013489378 0 W/13489378-13489378 FN2375 SNP C -> T AC=1;AN=192;BQB=0.0468648;DP=4912;DP4=2337,2257,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.25737e-05;MQSB=0.00130602;RPB=0.994426;SGB=23.7852;VDB=0.923052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.2:13501169 chr02:013501169 0 W/13501169-13501169 FN2491 SNP C -> T AC=1;AN=200;BQB=0.169469;DP=4746;DP4=1986,2483,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35792e-08;MQSB=0.525858;RPB=0.270858;SGB=29.4849;VDB=0.26206;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.2:13502023 chr02:013502023 0 W/13502023-13502023 FN1537-S Single Base Substitution T-C INTRON HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN502-S.SNP.2:13503045 chr02:013503045 0 W/13503045-13503045 FN502-S Single Base Substitution T-C INTRON HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN3630-S.SNP.2:13512518 chr02:013512518 0 W/13512518-13512518 FN3630-S SNP C -> G AC=1;AN=190;BQB=0.906067;DP=2705;DP4=1347,1257,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000369686;MQB=2.95337e-05;MQSB=0.79224;RPB=0.784985;SGB=18.3316;VDB=0.267469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.2:13518771 chr02:013518771 0 W/13518771-13518771 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.904243;DP=2650;DP4=1063,1449,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.31541e-06;MQSB=0.999988;RPB=0.906247;SGB=30.704;VDB=0.300087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.2:13520944 chr02:013520944 0 W/13520944-13520944 FN3462-S SNP C -> A AC=2;AN=184;BQB=0.861426;DP=2571;DP4=1209,1293,8,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.02781e-08;MQSB=0.937763;RPB=0.508476;SGB=39.2697;VDB=0.37956;EFF=INTRON(MODIFIER||||150|LOC_Os02g22690|protein_coding|CODING|LOC_Os02g22690.1|1|1) FN997-S.SNP.2:13521796 chr02:013521796 0 W/13521796-13521796 FN997-S Single Base Substitution G-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3580-S.SNP.2:13522436 chr02:013522436 0 W/13522436-13522436 FN3580-S SNP G -> A AC=1;AN=188;BQB=0.933704;DP=2896;DP4=1533,1294,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.86021e-09;MQSB=0.985647;RPB=0.59932;SGB=58.0655;VDB=0.00653144;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.2:13522499 chr02:013522499 0 W/13522499-13522499 FN-332 Single Base Substitution G-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2325.SNP.2:13525987 chr02:013525987 0 W/13525987-13525987 FN2325 SNP T -> A AC=2;AN=192;BQB=0.902191;DP=4718;DP4=2122,2263,18,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.76299e-18;MQSB=0.997358;RPB=0.994146;SGB=77.6365;VDB=0.308008;EFF=INTRON(MODIFIER||||939|LOC_Os02g22700|protein_coding|CODING|LOC_Os02g22700.1|4|1) FN3696-S.SNP.2:13526401 chr02:013526401 0 W/13526401-13526401 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.974423;DP=2682;DP4=1300,1320,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.54313e-06;MQSB=0.982563;RPB=0.911267;SGB=35.4339;VDB=0.331571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R210W|939|LOC_Os02g22700|protein_coding|CODING|LOC_Os02g22700.1|4|1) FN3837-S.SNP.2:13531389 chr02:013531389 0 W/13531389-13531389 FN3837-S SNP G -> A AC=1;AN=190;BQB=0.999708;DP=3334;DP4=1361,1878,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05055e-09;MQSB=0.730024;RPB=0.417801;SGB=71.8647;VDB=0.310456;EFF=INTRON(MODIFIER||||293|LOC_Os02g22710|protein_coding|CODING|LOC_Os02g22710.1|1|1) FN1508-S.SNP.2:13534741 chr02:013534741 0 W/13534741-13534741 FN1508-S Single Base Substitution C-T INTRON Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3438-S.SNP.2:13534978 chr02:013534978 0 W/13534978-13534978 FN3438-S SNP C -> T AC=2;AN=184;BQB=0.942855;DP=2752;DP4=1091,1571,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.47463e-17;MQSB=0.979086;RPB=0.0922689;SGB=85.0529;VDB=0.225113;EFF=INTRON(MODIFIER||||690|LOC_Os02g22720|protein_coding|CODING|LOC_Os02g22720.1|2|1) FN_N1-130-1.SNP.2:13543161 chr02:013543161 0 W/13543161-13543161 FN_N1-130-1 Single Base Substitution C-G HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1042-S.SNP.2:13544544 chr02:013544544 0 W/13544544-13544544 FN1042-S Single Base Substitution G-C INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3699-S.SNP.2:13562497 chr02:013562497 0 W/13562497-13562497 FN3699-S SNP A -> C AC=2;AN=190;BQB=0.938652;DP=3094;DP4=1508,1433,25,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.37952e-19;MQSB=0.982683;RPB=0.715308;SGB=158.388;VDB=0.653857;EFF=INTRON(MODIFIER||||534|LOC_Os02g22780|protein_coding|CODING|LOC_Os02g22780.1|1|1),INTRON(MODIFIER||||504|LOC_Os02g22780|protein_coding|CODING|LOC_Os02g22780.2|1|1) FN-346.SNP.2:13575651 chr02:013575651 0 W/13575651-13575651 FN-346 Single Base Substitution G-A INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3496-S.SNP.2:13576936 chr02:013576936 0 W/13576936-13576936 FN3496-S SNP G -> A AC=2;AN=188;BQB=0.624707;DP=2514;DP4=1203,1250,10,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000397772;MQB=2.07435e-09;MQSB=0.97511;RPB=0.599729;SGB=85.3253;VDB=0.633915;EFF=INTRON(MODIFIER||||1115|LOC_Os02g22790|protein_coding|CODING|LOC_Os02g22790.1|3|1) FN1374-S.SNP.2:13577312 chr02:013577312 0 W/13577312-13577312 FN1374-S Single Base Substitution T-A STOP_GAINED HET LOC_Os02g22790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3527-S.SNP.2:13578754 chr02:013578754 0 W/13578754-13578754 FN3527-S SNP C -> T AC=2;AN=188;BQB=0.997858;DP=2941;DP4=1652,1202,12,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.36911e-15;MQSB=0.855914;RPB=0.595506;SGB=74.9605;VDB=0.727505;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.2:13579590 chr02:013579590 0 W/13579590-13579590 FN-291 Single Base Substitution G-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN805-S.SNP.2:13585720 chr02:013585720 0 W/13585720-13585720 FN805-S Single Base Substitution G-A INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1435-S.SNP.2:13587366 chr02:013587366 0 W/13587366-13587366 FN1435-S Single Base Substitution A-G INTRON HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2349.SNP.2:13590283 chr02:013590283 0 W/13590283-13590283 FN2349 SNP G -> T AC=1;AN=192;BQB=0.391784;DP=5111;DP4=2261,2537,21,18;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.0727842;MQB=0.99996;MQSB=0.00833697;RPB=0.992823;SGB=85.3296;VDB=0.535914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.2:13591144 chr02:013591144 0 W/13591144-13591144 FN2462 SNP C -> T AC=1;AN=200;BQB=0.709845;DP=4528;DP4=2278,1996,17,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.10063e-11;MQSB=0.0974459;RPB=0.961534;SGB=-73.6537;VDB=0.93885;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.2:13592640 chr02:013592640 0 W/13592640-13592640 FN670-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g22810 retrotransposon protein, putative, unclassified, expressed SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN405-S.SNP.2:13599483 chr02:013599483 0 W/13599483-13599483 FN405-S Single Base Substitution G-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3668-S.SNP.2:13600144 chr02:013600144 0 W/13600144-13600144 FN3668-S SNP G -> C AC=2;AN=190;BQB=0.982074;DP=1448;DP4=1371,20,15,0;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.50986e-07;MQSB=0.449301;RPB=0.7905;SGB=62.7569;VDB=0.00174414;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.2:13610472 chr02:013610472 0 W/13610472-13610472 FN769-S Single Base Substitution G-A INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN-179.SNP.2:13611509 chr02:013611509 0 W/13611509-13611509 FN-179 Single Base Substitution G-A INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN891-S.SNP.2:13612169 chr02:013612169 0 W/13612169-13612169 FN891-S Single Base Substitution C-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2252-S.SNP.2:13612868 chr02:013612868 0 W/13612868-13612868 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.0527375;DP=5867;DP4=2824,2144,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0514743;MQB=0.0548602;MQSB=2.52093e-05;RPB=0.962782;SGB=-58.8731;VDB=0.0241955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.2:13619201 chr02:013619201 0 W/13619201-13619201 FN2106-S SNP T -> C AC=1;AN=168;BQB=0.0050979;DP=3582;DP4=1811,1720,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0153546;MQB=0.478031;MQSB=0;RPB=0.132434;SGB=-257.746;VDB=0.577098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.2:13656580 chr02:013656580 0 W/13656580-13656580 FN2212-S SNP A -> C AC=1;AN=190;BQB=0.196117;DP=3034;DP4=1583,967,45,25;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.187212;MQB=2.70762e-05;MQSB=0.766507;RPB=1.11899e-10;SGB=-815.608;VDB=0.0309616;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.2:13656979 chr02:013656979 0 W/13656979-13656979 FN-81 Single Base Substitution G-T INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1526-S.SNP.2:13696406 chr02:013696406 0 W/13696406-13696406 FN1526-S Single Base Substitution A-T INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN3386-S.SNP.2:13703446 chr02:013703446 0 W/13703446-13703446 FN3386-S SNP C -> G AC=1;AN=184;BQB=0.931287;DP=6328;DP4=2866,2974,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0121681;MQB=0.00315814;MQSB=0.106564;RPB=0.415896;SGB=-153.643;VDB=0.0552247;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.2:13704278 chr02:013704278 0 W/13704278-13704278 W470-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1192-S.SNP.2:13714092 chr02:013714092 0 W/13714092-13714092 FN1192-S Single Base Substitution T-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN555-S.SNP.2:13720416 chr02:013720416 0 W/13720416-13720416 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2212-S.SNP.2:13740904 chr02:013740904 0 W/13740904-13740904 FN2212-S SNP C -> A AC=2;AN=190;BQB=0.84604;DP=4465;DP4=2267,1919,22,34;HOB=0.020831;ICB=0.494793;MQ=24;MQ0F=0.232027;MQB=0.0336392;MQSB=8.41336e-27;RPB=0.510331;SGB=188.917;VDB=0.298092;EFF=INTRON(MODIFIER||||602|LOC_Os02g23822|protein_coding|CODING|LOC_Os02g23822.1|1|1) FN3824-S.SNP.2:13756810 chr02:013756810 0 W/13756810-13756810 FN3824-S SNP A -> T AC=1;AN=190;BQB=0.648736;DP=3152;DP4=1592,1310,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0107868;MQB=0.00139787;MQSB=6.49857e-09;RPB=0.878049;SGB=67.3108;VDB=0.447742;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.2:13758162 chr02:013758162 0 W/13758162-13758162 FN1375-S Single Base Substitution C-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN589-S.SNP.2:13762514 chr02:013762514 0 W/13762514-13762514 FN589-S Single Base Substitution T-C INTRON HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-346.SNP.2:13763739 chr02:013763739 0 W/13763739-13763739 FN-346 Single Base Substitution T-G INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3293-S.SNP.2:13771708 chr02:013771708 0 W/13771708-13771708 FN3293-S SNP A -> G AC=1;AN=184;BQB=0.249053;DP=3425;DP4=1394,1896,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50894e-12;MQSB=0.9999;RPB=0.922585;SGB=116.569;VDB=0.572098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.2:13786597 chr02:013786597 0 W/13786597-13786597 FN3785-S SNP C -> A AC=1;AN=190;BQB=0.812092;DP=2565;DP4=1244,1244,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.062768;MQB=0.775456;MQSB=9.93072e-16;RPB=0.919562;SGB=53.6492;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.2:13788078 chr02:013788078 0 W/13788078-13788078 FN3594-S SNP G -> A AC=1;AN=188;BQB=0.964088;DP=3701;DP4=2296,1293,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.075385;MQB=0.996796;MQSB=0.0158619;RPB=0.934965;SGB=13.2547;VDB=0.97658;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.2:13791159 chr02:013791159 0 W/13791159-13791159 FN3967-S SNP C -> A AC=2;AN=182;BQB=0.998071;DP=3914;DP4=1397,2381,25,15;HOB=0.0217365;ICB=0.494567;MQ=21;MQ0F=0.474195;MQB=0.0118176;MQSB=0;RPB=0.0159255;SGB=174.926;VDB=0.160979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.2:13806186 chr02:013806186 0 W/13806186-13806186 FN2529-S SNP C -> A AC=1;AN=198;BQB=0.795442;DP=4356;DP4=2090,2076,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.99794e-07;MQSB=0.444222;RPB=0.767596;SGB=-16.2163;VDB=0.118224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L102I|310|LOC_Os02g23850|protein_coding|CODING|LOC_Os02g23850.1|1|1) FN2372.SNP.2:13810936 chr02:013810936 0 W/13810936-13810936 FN2372 SNP A -> T AC=1;AN=192;BQB=0.721034;DP=4315;DP4=1742,1957,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.61198e-06;MQSB=5.3285e-06;RPB=0.189361;SGB=50.4731;VDB=0.729376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.2:13812896 chr02:013812896 0 W/13812896-13812896 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.458134;DP=4909;DP4=2187,2414,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.05864e-06;MQSB=0.406305;RPB=0.847853;SGB=10.3266;VDB=0.499039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.2:13813178 chr02:013813178 0 W/13813178-13813178 FN3306-S SNP T -> A AC=1;AN=184;BQB=0.551316;DP=2711;DP4=1242,1337,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000368868;MQB=1.02968e-08;MQSB=0.590975;RPB=0.561802;SGB=-15.2358;VDB=0.0309983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.2:13813610 chr02:013813610 0 W/13813610-13813610 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.989663;DP=4130;DP4=1895,2202,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=7.1705e-05;MQSB=0.00253677;RPB=0.386731;SGB=5.62151;VDB=0.287478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.2:13817506 chr02:013817506 0 W/13817506-13817506 FN3466-S SNP G -> C AC=2;AN=184;BQB=0.707443;DP=2587;DP4=1360,1120,15,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.80741e-15;MQSB=0.907781;RPB=0.917343;SGB=106.184;VDB=0.113628;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.2:13840659 chr02:013840659 0 W/13840659-13840659 W385-6-8-4 Single Base Substitution T-C UTR_3_PRIME HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN-164.SNP.2:13843273 chr02:013843273 0 W/13843273-13843273 FN-164 Single Base Substitution C-T INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2668-S.SNP.2:13843421 chr02:013843421 0 W/13843421-13843421 FN2668-S SNP T -> A AC=1;AN=200;BQB=0.811124;DP=4941;DP4=2289,2427,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25404e-16;MQSB=0.971112;RPB=0.999236;SGB=90.7419;VDB=0.0389913;EFF=INTRON(MODIFIER||||372|LOC_Os02g23890|protein_coding|CODING|LOC_Os02g23890.1|3|1),INTRON(MODIFIER||||293|LOC_Os02g23890|protein_coding|CODING|LOC_Os02g23890.2|3|1) FN2462.SNP.2:13867335 chr02:013867335 0 W/13867335-13867335 FN2462 SNP C -> T AC=1;AN=200;BQB=0.942508;DP=4347;DP4=2038,2128,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97679e-13;MQSB=0.559104;RPB=0.792841;SGB=91.1059;VDB=0.124898;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R116*|136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.2|1|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R116*|136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.3|1|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R116*|136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.1|1|1) FN1668-S.SNP.2:13868016 chr02:013868016 0 W/13868016-13868016 FN1668-S SNP G -> T AC=1;AN=188;BQB=0.484321;DP=4104;DP4=2131,1923,16,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.33273e-14;MQSB=0.832797;RPB=0.015656;SGB=-44.2151;VDB=0.0829425;EFF=UTR_3_PRIME(MODIFIER||616||136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.2|1|1),UTR_3_PRIME(MODIFIER||616||136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.3|1|1),UTR_3_PRIME(MODIFIER||616||136|LOC_Os02g23939|protein_coding|CODING|LOC_Os02g23939.1|1|1) FN1565-S.SNP.2:13871482 chr02:013871482 0 W/13871482-13871482 FN1565-S Single Base Substitution G-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2629-S.SNP.2:13872971 chr02:013872971 0 W/13872971-13872971 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.675615;DP=4978;DP4=2607,2166,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54946e-11;MQSB=0.998678;RPB=0.916959;SGB=72.6852;VDB=0.595518;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.2:13875877 chr02:013875877 0 W/13875877-13875877 FN700-S Single Base Substitution A-G INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN-204.SNP.2:13876898 chr02:013876898 0 W/13876898-13876898 FN-204 Single Base Substitution C-G INTRON HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN1452-S.SNP.2:13884176 chr02:013884176 0 W/13884176-13884176 FN1452-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1737-S.SNP.2:13884176 chr02:013884176 0 W/13884176-13884176 FN1737-S SNP G -> A AC=2;AN=188;BQB=0.988119;DP=3872;DP4=1740,2063,22,30;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.5507e-25;MQSB=0.466137;RPB=0.489529;SGB=-51.9791;VDB=0.0756017;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.2:13887594 chr02:013887594 0 W/13887594-13887594 FN804-S Single Base Substitution G-A INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3343-S.SNP.2:13905145 chr02:013905145 0 W/13905145-13905145 FN3343-S SNP G -> C AC=2;AN=184;BQB=0.951257;DP=2970;DP4=1497,1385,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.79348e-16;MQSB=0.999149;RPB=0.217582;SGB=134.656;VDB=0.120808;EFF=INTRON(MODIFIER||||534|LOC_Os02g23980|protein_coding|CODING|LOC_Os02g23980.1|2|1) FN3446-S.SNP.2:13926383 chr02:013926383 0 W/13926383-13926383 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.901301;DP=2664;DP4=1287,1289,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=4.96326e-05;MQSB=0.426644;RPB=0.825331;SGB=35.1773;VDB=0.17134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.2:13928614 chr02:013928614 0 W/13928614-13928614 FN1209-S Single Base Substitution G-A INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2740-S.SNP.2:13932938 chr02:013932938 0 W/13932938-13932938 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.995982;DP=4980;DP4=2111,2655,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.51662e-12;MQSB=0.926169;RPB=0.877155;SGB=69.1109;VDB=0.977506;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.2:13937360 chr02:013937360 0 W/13937360-13937360 FN1272-S Single Base Substitution T-C INTRON HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN770-S.SNP.2:13938169 chr02:013938169 0 W/13938169-13938169 FN770-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g24050 retrotransposon protein, putative, unclassified, expressed SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3690-S.SNP.2:13941718 chr02:013941718 0 W/13941718-13941718 FN3690-S SNP T -> G AC=2;AN=190;BQB=0.988971;DP=3149;DP4=1505,1521,5,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000317561;MQB=8.34919e-10;MQSB=0.973669;RPB=0.340502;SGB=71.8647;VDB=0.144951;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.2:13945668 chr02:013945668 0 W/13945668-13945668 FN-278 Single Base Substitution G-C INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN402-S.SNP.2:13947521 chr02:013947521 0 W/13947521-13947521 FN402-S Single Base Substitution T-C INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN437-S.SNP.2:13954459 chr02:013954459 0 W/13954459-13954459 FN437-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN-161.SNP.2:13959368 chr02:013959368 0 W/13959368-13959368 FN-161 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g24090 retrotransposon protein, putative, unclassified, expressed SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2397.SNP.2:13961981 chr02:013961981 0 W/13961981-13961981 FN2397 SNP T -> G AC=2;AN=200;BQB=0.993884;DP=4772;DP4=2484,1975,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.79638e-18;MQSB=0.0801301;RPB=0.898877;SGB=119.583;VDB=0.422769;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.2:13962620 chr02:013962620 0 W/13962620-13962620 FN431-S Single Base Substitution G-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN2395.SNP.2:13962868 chr02:013962868 0 W/13962868-13962868 FN2395 SNP G -> A AC=1;AN=200;BQB=0.523472;DP=4685;DP4=2243,2127,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.97197e-12;MQSB=0.98679;RPB=0.99784;SGB=-7.6637;VDB=0.257004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.2:13965549 chr02:013965549 0 W/13965549-13965549 FN1565-S Single Base Substitution T-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2753-S.SNP.2:13981702 chr02:013981702 0 W/13981702-13981702 FN2753-S SNP G -> C AC=1;AN=200;BQB=0.117981;DP=5038;DP4=2373,2413,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60198e-10;MQSB=0.349824;RPB=0.869896;SGB=52.9314;VDB=0.895773;EFF=INTRON(MODIFIER||||567|LOC_Os02g24134|protein_coding|CODING|LOC_Os02g24134.1|7|1),INTRON(MODIFIER||||509|LOC_Os02g24134|protein_coding|CODING|LOC_Os02g24134.2|7|1),INTRON(MODIFIER||||379|LOC_Os02g24134|protein_coding|CODING|LOC_Os02g24134.3|7|1) FN430-S.SNP.2:13986527 chr02:013986527 0 W/13986527-13986527 FN430-S Single Base Substitution A-G INTRON HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN430-S.SNP.2:13986528 chr02:013986528 0 W/13986528-13986528 FN430-S Single Base Substitution G-A INTRON HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. W138-2-1.SNP.2:13987366 chr02:013987366 0 W/13987366-13987366 W138-2-1 Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2779-S.SNP.2:13988895 chr02:013988895 0 W/13988895-13988895 FN2779-S SNP T -> C AC=1;AN=198;BQB=0.935059;DP=4612;DP4=2347,2053,21,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.22723e-17;MQSB=0.26517;RPB=0.0590507;SGB=-2.5285;VDB=0.370756;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.2:13996804 chr02:013996804 0 W/13996804-13996804 FN926-S Single Base Substitution G-T INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3897-S.SNP.2:13998022 chr02:013998022 0 W/13998022-13998022 FN3897-S SNP G -> T AC=2;AN=158;BQB=0.76633;DP=2290;DP4=965,1215,14,19;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00567686;MQB=7.93063e-15;MQSB=0.452591;RPB=0.487369;SGB=138.826;VDB=0.128871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.2:13999526 chr02:013999526 0 W/13999526-13999526 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.986816;DP=4111;DP4=2035,1851,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000382414;MQSB=0.00237044;RPB=0.800415;SGB=35.7638;VDB=0.431879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.2:14009492 chr02:014009492 0 W/14009492-14009492 FN1366-S Single Base Substitution G-A INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2729-S.SNP.2:14012277 chr02:014012277 0 W/14012277-14012277 FN2729-S SNP G -> T AC=1;AN=200;BQB=0.96373;DP=5218;DP4=2258,2666,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.55174e-12;MQSB=0.998505;RPB=0.407775;SGB=69.1109;VDB=0.0641073;EFF=INTRON(MODIFIER||||630|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.1|2|1),INTRON(MODIFIER||||630|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.2|1|1),INTRON(MODIFIER||||483|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.3|1|1) FN2530-S.SNP.2:14016733 chr02:014016733 0 W/14016733-14016733 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.663162;DP=4495;DP4=2274,2032,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.58811e-07;MQSB=0.909165;RPB=0.196921;SGB=24.1541;VDB=0.391784;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P262|630|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P262|630|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P115|483|LOC_Os02g24190|protein_coding|CODING|LOC_Os02g24190.3|7|1) FN478-S.SNP.2:14026192 chr02:014026192 0 W/14026192-14026192 FN478-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g24210 expressed protein SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1713-S.SNP.2:14034171 chr02:014034171 0 W/14034171-14034171 FN1713-S SNP G -> A AC=1;AN=188;BQB=0.0157973;DP=2351;DP4=978,1337,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.422799;MQB=0.500309;MQSB=1.54311e-11;RPB=0.138886;SGB=-35.5377;VDB=0.373011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.2:14038746 chr02:014038746 0 W/14038746-14038746 FN2719-S SNP C -> G AC=1;AN=200;BQB=0.712992;DP=5039;DP4=2443,2346,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48047e-10;MQSB=0.982579;RPB=0.9951;SGB=32.0901;VDB=0.601682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.2:14039614 chr02:014039614 0 W/14039614-14039614 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.713526;DP=4362;DP4=1991,2075,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.75653e-11;MQSB=0.946998;RPB=0.565066;SGB=81.7147;VDB=0.717629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.2:14041640 chr02:014041640 0 W/14041640-14041640 FN2683-S SNP T -> C AC=1;AN=200;BQB=0.947701;DP=4909;DP4=2462,2216,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1496e-07;MQSB=0.997271;RPB=0.933288;SGB=51.0851;VDB=0.147712;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.2:14042927 chr02:014042927 0 W/14042927-14042927 FN1568-S Single Base Substitution T-A STOP_GAINED HET LOC_Os02g24230 retrotransposon, putative, centromere-specific, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN-207.SNP.2:14044138 chr02:014044138 0 W/14044138-14044138 FN-207 Single Base Substitution C-A INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. W481-5-1.SNP.2:14044917 chr02:014044917 0 W/14044917-14044917 W481-5-1 Single Base Substitution C-A INTRON HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3788-S.SNP.2:14045022 chr02:014045022 0 W/14045022-14045022 FN3788-S SNP C -> G AC=1;AN=190;BQB=0.655389;DP=2686;DP4=1375,1230,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.79822e-08;MQSB=0.99908;RPB=0.264207;SGB=58.2031;VDB=0.708727;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R554T|818|LOC_Os02g24230|protein_coding|CODING|LOC_Os02g24230.1|4|1) FN1746-S.SNP.2:14045315 chr02:014045315 0 W/14045315-14045315 FN1746-S SNP A -> G AC=1;AN=188;BQB=0.834153;DP=2163;DP4=1056,1074,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000924642;MQB=0.000219219;MQSB=0.96382;RPB=0.338915;SGB=-16.6296;VDB=0.382138;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D456|818|LOC_Os02g24230|protein_coding|CODING|LOC_Os02g24230.1|4|1) FN1356-S.SNP.2:14047343 chr02:014047343 0 W/14047343-14047343 FN1356-S Single Base Substitution G-A INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN4344-S.SNP.2:14055269 chr02:014055269 0 W/14055269-14055269 FN4344-S SNP C -> T AC=1;AN=170;BQB=0.994121;DP=2468;DP4=1003,1353,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.07883e-10;MQSB=0.472257;RPB=0.996788;SGB=65.6427;VDB=0.882354;EFF=INTRON(MODIFIER||||137|LOC_Os02g24240|protein_coding|CODING|LOC_Os02g24240.1|1|1) FN2387.SNP.2:14060854 chr02:014060854 0 W/14060854-14060854 FN2387 SNP A -> G AC=1;AN=192;BQB=0.998921;DP=5460;DP4=2841,2218,5,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.49527e-08;MQSB=0.894573;RPB=0.456682;SGB=54.0374;VDB=0.977291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.2:14066139 chr02:014066139 0 W/14066139-14066139 FN2339 SNP T -> C AC=1;AN=192;BQB=0.753956;DP=5217;DP4=2350,2409,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=18;MQ0F=0.276787;MQB=0.0949573;MQSB=8.54297e-12;RPB=0.962594;SGB=10.4835;VDB=0.948562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V991A|1713|LOC_Os02g24250|protein_coding|CODING|LOC_Os02g24250.1|4|1) FN3938-S.SNP.2:14067225 chr02:014067225 0 W/14067225-14067225 FN3938-S SNP A -> C AC=2;AN=158;BQB=0.632891;DP=3024;DP4=1718,1214,13,10;HOB=0.024996;ICB=0.493752;MQ=16;MQ0F=0.352183;MQB=0.406863;MQSB=1.32111e-12;RPB=0.692933;SGB=40.4048;VDB=0.898744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E1289A|1713|LOC_Os02g24250|protein_coding|CODING|LOC_Os02g24250.1|5|1) FN3393-S.SNP.2:14068682 chr02:014068682 0 W/14068682-14068682 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.972289;DP=3290;DP4=1312,1843,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.0468085;MQB=0.808255;MQSB=8.52818e-09;RPB=0.670687;SGB=46.3132;VDB=0.410408;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.2:14082178 chr02:014082178 0 W/14082178-14082178 FN673-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g24280 transposon protein, putative, unclassified, expressed SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN3294-S.SNP.2:14085567 chr02:014085567 0 W/14085567-14085567 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.987367;DP=2954;DP4=1422,1445,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66455e-07;MQSB=0.998685;RPB=0.692869;SGB=53.2642;VDB=0.92;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W231*|1092|LOC_Os02g24280|protein_coding|CODING|LOC_Os02g24280.1|2|1);LOF=(LOC_Os02g24280|LOC_Os02g24280|1|1.00);NMD=(LOC_Os02g24280|LOC_Os02g24280|1|1.00) FN1256-S.SNP.2:14087402 chr02:014087402 0 W/14087402-14087402 FN1256-S Single Base Substitution T-G INTRON HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN726-S.SNP.2:14093731 chr02:014093731 0 W/14093731-14093731 FN726-S Single Base Substitution G-A INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2353.SNP.2:14099321 chr02:014099321 0 W/14099321-14099321 FN2353 SNP T -> A AC=1;AN=192;BQB=0.970096;DP=5028;DP4=2412,2365,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000397772;MQB=1.59758e-11;MQSB=0.996796;RPB=0.145056;SGB=-12.5113;VDB=0.497518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.2:14102272 chr02:014102272 0 W/14102272-14102272 FN1271-S Single Base Substitution T-C INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2530-S.SNP.2:14107638 chr02:014107638 0 W/14107638-14107638 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.597252;DP=3231;DP4=1426,1565,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000309502;MQB=5.30261e-08;MQSB=0.0330276;RPB=0.995728;SGB=67.9293;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.2:14110163 chr02:014110163 0 W/14110163-14110163 W42-1-3S-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g24320 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1307-S.SNP.2:14111091 chr02:014111091 0 W/14111091-14111091 FN1307-S Single Base Substitution T-G INTRON HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2659-S.SNP.2:14119805 chr02:014119805 0 W/14119805-14119805 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.492628;DP=5072;DP4=2410,2261,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.04085e-09;MQSB=0.596031;RPB=0.957616;SGB=-12.5051;VDB=0.362814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.2:14130854 chr02:014130854 0 W/14130854-14130854 FN-334 Single Base Substitution A-T INTRON HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1170-S.SNP.2:14133869 chr02:014133869 0 W/14133869-14133869 FN1170-S Single Base Substitution G-C INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3836-S.SNP.2:14135072 chr02:014135072 0 W/14135072-14135072 FN3836-S SNP C -> A AC=1;AN=190;BQB=0.997745;DP=2148;DP4=1087,970,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000296075;MQSB=0.00479056;RPB=0.863886;SGB=35.4339;VDB=0.890922;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.2:14140234 chr02:014140234 0 W/14140234-14140234 FN996-S Single Base Substitution G-T INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1506-S.SNP.2:14147567 chr02:014147567 0 W/14147567-14147567 FN1506-S Single Base Substitution C-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN886-S.SNP.2:14148541 chr02:014148541 0 W/14148541-14148541 FN886-S Single Base Substitution T-A INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN3669-S.SNP.2:14150521 chr02:014150521 0 W/14150521-14150521 FN3669-S SNP G -> A AC=2;AN=190;BQB=0.819042;DP=2746;DP4=1287,1355,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.14051e-09;MQSB=0.98921;RPB=0.970935;SGB=80.9724;VDB=0.797068;EFF=INTRON(MODIFIER||||131|LOC_Os02g24400|protein_coding|CODING|LOC_Os02g24400.1|3|1) FN3669-S.SNP.2:14151078 chr02:014151078 0 W/14151078-14151078 FN3669-S SNP T -> C AC=2;AN=190;BQB=0.978179;DP=3368;DP4=1707,1504,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.39863e-15;MQSB=0.953085;RPB=0.8659;SGB=51.7524;VDB=0.868484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.2:14153741 chr02:014153741 0 W/14153741-14153741 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.508437;DP=4004;DP4=2018,1779,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.65251e-10;MQSB=0.916876;RPB=0.197054;SGB=4.56404;VDB=0.0248053;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.2:14155009 chr02:014155009 0 W/14155009-14155009 FN792-S Single Base Substitution C-G INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN4204-S.SNP.2:14158159 chr02:014158159 0 W/14158159-14158159 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.960077;DP=2491;DP4=1248,1166,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24903e-05;MQSB=0.999557;RPB=0.611571;SGB=34.5445;VDB=0.618905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-37-38.SNP.2:14175533 chr02:014175533 0 W/14175533-14175533 FN1554-37-38 SNP C -> T AC=1;AN=190;BQB=0.997816;DP=4078;DP4=1717,1902,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.40483e-06;MQSB=0.985356;RPB=0.511228;SGB=39.6544;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN-148.SNP.2:14177481 chr02:014177481 0 W/14177481-14177481 FN-148 Single Base Substitution C-T INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1546-S.SNP.2:14180372 chr02:014180372 0 W/14180372-14180372 FN1546-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g24480 retrotransposon protein, putative, unclassified, expressed SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1302-S.SNP.2:14180410 chr02:014180410 0 W/14180410-14180410 FN1302-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g24480 retrotransposon protein, putative, unclassified, expressed SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN576-S.SNP.2:14180966 chr02:014180966 0 W/14180966-14180966 FN576-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g24480 retrotransposon protein, putative, unclassified, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN769-S.SNP.2:14181964 chr02:014181964 0 W/14181964-14181964 FN769-S Single Base Substitution G-A INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3316-S.SNP.2:14190451 chr02:014190451 0 W/14190451-14190451 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.851566;DP=2801;DP4=1233,1448,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00214209;MQB=2.04352e-06;MQSB=0.839941;RPB=0.985025;SGB=18.2315;VDB=0.159298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.2:14191091 chr02:014191091 0 W/14191091-14191091 FN1082-S Single Base Substitution C-A INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN3422-S.SNP.2:14191820 chr02:014191820 0 W/14191820-14191820 FN3422-S SNP G -> C AC=1;AN=184;BQB=0.613384;DP=1893;DP4=590,951,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0142631;MQB=0.998795;MQSB=0.00476281;RPB=0.996922;SGB=-0.806606;VDB=0.820586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.2:14202644 chr02:014202644 0 W/14202644-14202644 FN2198-S SNP G -> A AC=1;AN=190;BQB=0.832276;DP=4229;DP4=1923,1770,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0461102;MQB=0.00625078;MQSB=2.51042e-24;RPB=0.196217;SGB=44.5415;VDB=0.0132769;EFF=INTERGENIC(MODIFIER||||||||||1) FN697-S.SNP.2:14210764 chr02:014210764 0 W/14210764-14210764 FN697-S Single Base Substitution T-G INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN3385-S.SNP.2:14211255 chr02:014211255 0 W/14211255-14211255 FN3385-S SNP T -> A AC=1;AN=184;BQB=0.527474;DP=3061;DP4=1594,1337,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00294022;MQB=0.372096;MQSB=0.209707;RPB=0.999919;SGB=-0.806606;VDB=0.993317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N509Y|611|LOC_Os02g24520|protein_coding|CODING|LOC_Os02g24520.1|1|1) FN753-S.SNP.2:14220383 chr02:014220383 0 W/14220383-14220383 FN753-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2572-S.SNP.2:14223292 chr02:014223292 0 W/14223292-14223292 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.662338;DP=4338;DP4=2054,1988,23,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.00554e-20;MQSB=0.891388;RPB=0.50292;SGB=140.812;VDB=0.393197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:14223292 chr02:014223292 0 W/14223292-14223292 FN2572-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3574-S.SNP.2:14225656 chr02:014225656 0 W/14225656-14225656 FN3574-S SNP G -> T AC=1;AN=188;BQB=0.991862;DP=3438;DP4=1817,1487,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.90917e-10;MQSB=0.74109;RPB=0.657926;SGB=60.7873;VDB=0.00640486;EFF=INTRON(MODIFIER||||1086|LOC_Os02g24550|protein_coding|CODING|LOC_Os02g24550.1|2|1) W42-1-3S-1.SNP.2:14226688 chr02:014226688 0 W/14226688-14226688 W42-1-3S-1 Single Base Substitution A-G INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3800-S.SNP.2:14230343 chr02:014230343 0 W/14230343-14230343 FN3800-S SNP G -> T AC=1;AN=190;BQB=0.977403;DP=2015;DP4=909,978,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51109e-05;MQSB=0.00491576;RPB=0.467182;SGB=44.5415;VDB=0.0617175;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.2:14236125 chr02:014236125 0 W/14236125-14236125 FN732-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g24570 retrotransposon protein, putative, unclassified SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN3976-S.SNP.2:14237597 chr02:014237597 0 W/14237597-14237597 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.996914;DP=3063;DP4=1404,1486,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.56341e-06;MQSB=0.716155;RPB=0.548236;SGB=43.3113;VDB=0.895748;EFF=INTRON(MODIFIER||||653|LOC_Os02g24570|protein_coding|CODING|LOC_Os02g24570.1|2|1) FN3887-S.SNP.2:14289743 chr02:014289743 0 W/14289743-14289743 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.862939;DP=2356;DP4=1211,1048,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000424448;MQB=1.95108e-09;MQSB=6.61383e-05;RPB=0.997122;SGB=61.029;VDB=0.198329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.2:14289778 chr02:014289778 0 W/14289778-14289778 FN2448 SNP A -> C AC=1;AN=200;BQB=0.423954;DP=4056;DP4=1535,1719,10,13;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00961538;MQB=0.0015217;MQSB=1.79849e-15;RPB=0.44398;SGB=-65.2847;VDB=0.928099;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.2:14294313 chr02:014294313 0 W/14294313-14294313 FN1026-S Single Base Substitution C-G INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN4051-S.SNP.2:14304632 chr02:014304632 0 W/14304632-14304632 FN4051-S SNP G -> A AC=2;AN=168;BQB=0.273351;DP=2487;DP4=1114,1257,21,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61728e-17;MQSB=0.999551;RPB=0.895534;SGB=127.38;VDB=0.810076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.2:14304999 chr02:014304999 0 W/14304999-14304999 FN2474 SNP A -> G AC=1;AN=200;BQB=0.418929;DP=4836;DP4=2295,2230,17,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=5.46371e-10;MQSB=0.0831163;RPB=0.975653;SGB=60.747;VDB=0.811468;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.2:14305086 chr02:014305086 0 W/14305086-14305086 FN-283 Single Base Substitution A-G INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN-283.SNP.2:14305087 chr02:014305087 0 W/14305087-14305087 FN-283 Single Base Substitution A-T INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN-221.SNP.2:14305405 chr02:014305405 0 W/14305405-14305405 FN-221 Single Base Substitution T-C INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN4099-S.SNP.2:14310032 chr02:014310032 0 W/14310032-14310032 FN4099-S SNP C -> A AC=1;AN=182;BQB=0.617191;DP=2912;DP4=1556,1277,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.0604396;MQB=0.625598;MQSB=1.12912e-16;RPB=0.989107;SGB=35.6277;VDB=0.499456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P321H|1561|LOC_Os02g24670|protein_coding|CODING|LOC_Os02g24670.1|5|1) FN1344-S.SNP.2:14310782 chr02:014310782 0 W/14310782-14310782 FN1344-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g24670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2185-S.SNP.2:14314249 chr02:014314249 0 W/14314249-14314249 FN2185-S SNP A -> T AC=1;AN=190;BQB=0.812947;DP=4562;DP4=2249,1967,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00153441;MQB=5.53311e-14;MQSB=0.174777;RPB=0.813524;SGB=64.5217;VDB=0.0911607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.2:14314503 chr02:014314503 0 W/14314503-14314503 FN2349 SNP A -> C AC=1;AN=192;BQB=0.808624;DP=4534;DP4=2070,2092,7,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.57127e-11;MQSB=0.130299;RPB=0.278637;SGB=71.8591;VDB=0.307091;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.2:14315557 chr02:014315557 0 W/14315557-14315557 FN1304-S Single Base Substitution G-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2472.SNP.2:14315994 chr02:014315994 0 W/14315994-14315994 FN2472 SNP C -> T AC=1;AN=200;BQB=0.587654;DP=4740;DP4=2486,1973,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.77481e-12;MQSB=0.999391;RPB=0.96126;SGB=72.7161;VDB=0.123843;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.2:14320834 chr02:014320834 0 W/14320834-14320834 FN-245 Single Base Substitution T-A INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1349-S.SNP.2:14327473 chr02:014327473 0 W/14327473-14327473 FN1349-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN3968-S.SNP.2:14327844 chr02:014327844 0 W/14327844-14327844 FN3968-S SNP T -> A AC=1;AN=168;BQB=0.938452;DP=2483;DP4=1313,1088,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000402739;MQB=8.83685e-09;MQSB=0.677268;RPB=0.981181;SGB=41.6096;VDB=0.686957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.2:14328698 chr02:014328698 0 W/14328698-14328698 FN2107-S SNP G -> A AC=1;AN=168;BQB=0.640038;DP=3499;DP4=1512,1932,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0185767;MQB=0.00523249;MQSB=2.40995e-09;RPB=0.0119269;SGB=12.7756;VDB=0.660675;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.2:14329423 chr02:014329423 0 W/14329423-14329423 FN4049-S SNP T -> A AC=1;AN=168;BQB=0.363684;DP=2427;DP4=1053,1273,3,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08541e-07;MQSB=0.963597;RPB=0.716091;SGB=24.6155;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.2:14336286 chr02:014336286 0 W/14336286-14336286 FN2112-S SNP A -> T AC=2;AN=168;BQB=0.0151084;DP=2917;DP4=1785,1091,17,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.13596e-16;MQSB=0.785042;RPB=0.997787;SGB=-8.04863;VDB=0.14203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.2:14336287 chr02:014336287 0 W/14336287-14336287 FN2112-S SNP C -> T AC=2;AN=168;BQB=0.164371;DP=2914;DP4=1777,1090,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.68029e-16;MQSB=0.829831;RPB=0.914159;SGB=-90.0367;VDB=0.0705312;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.2:14340152 chr02:014340152 0 W/14340152-14340152 FN547-S Single Base Substitution C-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN1190-S.SNP.2:14345632 chr02:014345632 0 W/14345632-14345632 FN1190-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g24730 retrotransposon protein, putative, unclassified, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3771-S.SNP.2:14345675 chr02:014345675 0 W/14345675-14345675 FN3771-S SNP G -> A AC=1;AN=190;BQB=0.973363;DP=2274;DP4=1047,1149,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77539e-10;MQSB=0.997929;RPB=0.963517;SGB=67.3108;VDB=0.812692;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N652|1529|LOC_Os02g24730|protein_coding|CODING|LOC_Os02g24730.1|2|1) FN2721-S.SNP.2:14345780 chr02:014345780 0 W/14345780-14345780 FN2721-S SNP C -> A AC=1;AN=200;BQB=0.991807;DP=4558;DP4=2190,2092,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08178e-10;MQSB=0.954283;RPB=0.944513;SGB=47.4799;VDB=0.342582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L617F|1529|LOC_Os02g24730|protein_coding|CODING|LOC_Os02g24730.1|2|1) FN2080-S.SNP.2:14348740 chr02:014348740 0 W/14348740-14348740 FN2080-S SNP T -> C AC=1;AN=168;BQB=0.393367;DP=3295;DP4=1583,1674,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32695e-07;MQSB=0.909062;RPB=0.865951;SGB=41.6096;VDB=0.495236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.2:14350260 chr02:014350260 0 W/14350260-14350260 FN2390 SNP T -> A AC=1;AN=200;BQB=0.88733;DP=5193;DP4=2671,2295,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.63866e-11;MQSB=0.571641;RPB=0.621573;SGB=58.2954;VDB=0.0225512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.2:14378285 chr02:014378285 0 W/14378285-14378285 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.507652;DP=4633;DP4=2211,2134,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51064e-10;MQSB=0.547244;RPB=0.953027;SGB=39.9056;VDB=0.428146;EFF=INTRON(MODIFIER||||1085|LOC_Os02g24780|protein_coding|CODING|LOC_Os02g24780.1|3|1) FN1323-S.SNP.2:14378321 chr02:014378321 0 W/14378321-14378321 FN1323-S Single Base Substitution T-A INTRON HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1000-S.SNP.2:14378580 chr02:014378580 0 W/14378580-14378580 FN1000-S Single Base Substitution A-T INTRON HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3795-S.SNP.2:14380662 chr02:014380662 0 W/14380662-14380662 FN3795-S SNP T -> G AC=1;AN=190;BQB=0.602402;DP=2726;DP4=1282,1372,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12616e-07;MQSB=0.899587;RPB=0.975098;SGB=36.1006;VDB=0.665058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.2:14383103 chr02:014383103 0 W/14383103-14383103 FN2335 SNP G -> A AC=1;AN=192;BQB=0.399338;DP=4330;DP4=2202,1787,20,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.45246e-19;MQSB=0.533399;RPB=0.916306;SGB=44.8992;VDB=0.511427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.2:14385769 chr02:014385769 0 W/14385769-14385769 FN2098-S SNP C -> G AC=1;AN=168;BQB=0.356199;DP=2872;DP4=1457,1354,27,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.97564e-21;MQSB=0.953404;RPB=0.270916;SGB=-136.6;VDB=0.632381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q307E|1160|LOC_Os02g24790|protein_coding|CODING|LOC_Os02g24790.1|2|1) FN3287-S.SNP.2:14386191 chr02:014386191 0 W/14386191-14386191 FN3287-S SNP T -> C AC=1;AN=184;BQB=0.817323;DP=3522;DP4=1564,1824,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000851789;MQB=1.51706e-10;MQSB=0.74541;RPB=0.998132;SGB=38.4058;VDB=0.953361;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T437|1160|LOC_Os02g24790|protein_coding|CODING|LOC_Os02g24790.1|3|1) FN1265-S.SNP.2:14386950 chr02:014386950 0 W/14386950-14386950 FN1265-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3354-S.SNP.2:14389307 chr02:014389307 0 W/14389307-14389307 FN3354-S SNP C -> T AC=2;AN=184;BQB=0.984103;DP=3356;DP4=1698,1554,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.92074e-15;MQSB=0.999726;RPB=0.971421;SGB=112.047;VDB=0.89541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1024V|1160|LOC_Os02g24790|protein_coding|CODING|LOC_Os02g24790.1|7|1) FN354-S.SNP.2:14394606 chr02:014394606 0 W/14394606-14394606 FN354-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN4231-S.SNP.2:14398799 chr02:014398799 0 W/14398799-14398799 FN4231-S SNP T -> C AC=1;AN=170;BQB=0.996501;DP=2497;DP4=1322,1084,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0601e-06;MQSB=0.993909;RPB=0.994878;SGB=47.8722;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.2:14400463 chr02:014400463 0 W/14400463-14400463 FN832-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2637-S.SNP.2:14400716 chr02:014400716 0 W/14400716-14400716 FN2637-S SNP A -> T AC=1;AN=200;BQB=0.734063;DP=4368;DP4=1972,2046,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.69598e-08;MQSB=0.768929;RPB=0.969317;SGB=21.6694;VDB=0.79373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.2:14400739 chr02:014400739 0 W/14400739-14400739 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.699497;DP=4459;DP4=2045,2178,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.68499e-07;MQSB=0.80754;RPB=0.631354;SGB=40.4492;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.2:14401362 chr02:014401362 0 W/14401362-14401362 FN4183-S SNP G -> T AC=2;AN=170;BQB=0.611034;DP=2415;DP4=1153,1151,26,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.88909e-18;MQSB=0.807625;RPB=0.985323;SGB=171.335;VDB=0.562935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1493-S.SNP.2:14403568 chr02:014403568 0 W/14403568-14403568 FN1493-S Single Base Substitution A-C INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3630-S.SNP.2:14404497 chr02:014404497 0 W/14404497-14404497 FN3630-S SNP T -> C AC=2;AN=190;BQB=0.952434;DP=2935;DP4=1431,1378,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.83072e-16;MQSB=0.954794;RPB=0.215755;SGB=117.403;VDB=0.736134;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.2:14407467 chr02:014407467 0 W/14407467-14407467 FN-227 Single Base Substitution A-G INTRON HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2637-S.SNP.2:14408534 chr02:014408534 0 W/14408534-14408534 FN2637-S SNP T -> G AC=1;AN=200;BQB=0.717781;DP=4991;DP4=2551,2214,12,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.13347e-10;MQSB=0.000458853;RPB=0.925458;SGB=11.0951;VDB=0.00384437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E1533D|1780|LOC_Os02g24860|protein_coding|CODING|LOC_Os02g24860.1|6|1) FN3909-S.SNP.2:14408954 chr02:014408954 0 W/14408954-14408954 FN3909-S SNP C -> T AC=1;AN=158;BQB=0.856452;DP=2312;DP4=1152,1084,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.89733e-10;MQSB=0.399811;RPB=0.784714;SGB=73.2838;VDB=0.521408;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1393|1780|LOC_Os02g24860|protein_coding|CODING|LOC_Os02g24860.1|6|1) FN3909-S.SNP.2:14408955 chr02:014408955 0 W/14408955-14408955 FN3909-S SNP A -> T AC=1;AN=158;BQB=0.846418;DP=2319;DP4=1169,1088,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08545e-10;MQSB=0.47681;RPB=0.899627;SGB=68.9144;VDB=0.601724;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L1393*|1780|LOC_Os02g24860|protein_coding|CODING|LOC_Os02g24860.1|6|1);LOF=(LOC_Os02g24860|LOC_Os02g24860|1|1.00);NMD=(LOC_Os02g24860|LOC_Os02g24860|1|1.00) FN2707-S.SNP.2:14420186 chr02:014420186 0 W/14420186-14420186 FN2707-S SNP T -> C AC=1;AN=200;BQB=0.0173361;DP=4682;DP4=2307,2135,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.81823e-07;MQSB=0.845993;RPB=0.966511;SGB=54.6902;VDB=0.623607;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.2:14423397 chr02:014423397 0 W/14423397-14423397 W450-6-1 Single Base Substitution A-C INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-68.SNP.2:14429601 chr02:014429601 0 W/14429601-14429601 FN-68 Single Base Substitution C-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1009-S.SNP.2:14430870 chr02:014430870 0 W/14430870-14430870 FN1009-S Single Base Substitution A-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2206-S.SNP.2:14432393 chr02:014432393 0 W/14432393-14432393 FN2206-S SNP G -> A AC=2;AN=190;BQB=0.83951;DP=4982;DP4=2398,2253,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13836e-20;MQSB=0.607322;RPB=0.213012;SGB=114.286;VDB=0.276761;EFF=INTRON(MODIFIER||||717|LOC_Os02g24890|protein_coding|CODING|LOC_Os02g24890.1|3|1) FN2206-S.SNP.2:14432394 chr02:014432394 0 W/14432394-14432394 FN2206-S SNP C -> A AC=2;AN=190;BQB=0.999374;DP=4999;DP4=2422,2244,18,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.02563e-20;MQSB=0.553729;RPB=0.517119;SGB=153.834;VDB=0.47516;EFF=INTRON(MODIFIER||||717|LOC_Os02g24890|protein_coding|CODING|LOC_Os02g24890.1|3|1) FN1295-S.SNP.2:14442483 chr02:014442483 0 W/14442483-14442483 FN1295-S Single Base Substitution C-T INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1400-S.SNP.2:14449446 chr02:014449446 0 W/14449446-14449446 FN1400-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN3377-S.SNP.2:14449446 chr02:014449446 0 W/14449446-14449446 FN3377-S SNP G -> A AC=1;AN=184;BQB=0.954704;DP=3050;DP4=1421,1535,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000214141;MQSB=0.977507;RPB=0.868325;SGB=18.1394;VDB=0.49762;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.2:14449446 chr02:014449446 0 W/14449446-14449446 FN3562-S SNP G -> A AC=2;AN=188;BQB=0.947716;DP=2987;DP4=1405,1488,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.12236e-17;MQSB=0.866261;RPB=0.496896;SGB=148.931;VDB=0.648561;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.2:14449446 chr02:014449446 0 W/14449446-14449446 FN4043-S SNP G -> A AC=2;AN=168;BQB=0.976441;DP=2634;DP4=1189,1307,16,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.70267e-19;MQSB=0.978081;RPB=0.999807;SGB=113.657;VDB=0.988579;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.2:14449446 chr02:014449446 0 W/14449446-14449446 FN793-S Single Base Substitution G-A INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN513-S.SNP.2:14454255 chr02:014454255 0 W/14454255-14454255 FN513-S Single Base Substitution A-C INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN418-S.SNP.2:14455999 chr02:014455999 0 W/14455999-14455999 FN418-S Single Base Substitution T-A INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN418-S.SNP.2:14456000 chr02:014456000 0 W/14456000-14456000 FN418-S Single Base Substitution C-A INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1746-S.SNP.2:14459775 chr02:014459775 0 W/14459775-14459775 FN1746-S SNP G -> A AC=1;AN=188;BQB=0.0270313;DP=3537;DP4=1735,1746,17,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000282725;MQB=9.12492e-08;MQSB=0;RPB=0.536888;SGB=-135.175;VDB=0.121495;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.2:14459784 chr02:014459784 0 W/14459784-14459784 FN3522-S SNP A -> G AC=1;AN=188;BQB=0.517729;DP=2761;DP4=1325,1314,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.06853e-06;MQSB=0.0793837;RPB=0.343528;SGB=-3.72151;VDB=0.757013;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.2:14466607 chr02:014466607 0 W/14466607-14466607 FN2214-S SNP A -> C AC=1;AN=190;BQB=0.550981;DP=5303;DP4=2333,2530,12,22;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00565718;MQB=4.10699e-05;MQSB=0.000182783;RPB=0.735206;SGB=149.281;VDB=0.996541;EFF=INTRON(MODIFIER||||1082|LOC_Os02g24950|protein_coding|CODING|LOC_Os02g24950.1|1|1) FN2637-S.SNP.2:14467080 chr02:014467080 0 W/14467080-14467080 FN2637-S SNP T -> A AC=1;AN=200;BQB=0.993578;DP=4815;DP4=2186,2451,5,10;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0417445;MQB=0.357474;MQSB=1.96176e-28;RPB=0.494013;SGB=43.8747;VDB=0.462893;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K68*|1082|LOC_Os02g24950|protein_coding|CODING|LOC_Os02g24950.1|1|1);LOF=(LOC_Os02g24950|LOC_Os02g24950|1|1.00);NMD=(LOC_Os02g24950|LOC_Os02g24950|1|1.00) FN2264-S.SNP.2:14478984 chr02:014478984 0 W/14478984-14478984 FN2264-S SNP T -> C AC=2;AN=190;BQB=0.0173977;DP=4536;DP4=2077,2078,31,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000220459;MQB=4.05803e-17;MQSB=4.21568e-07;RPB=0.235292;SGB=-44.8008;VDB=0.00970068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.2:14482519 chr02:014482519 0 W/14482519-14482519 FN2232-S SNP C -> A AC=1;AN=190;BQB=0.242923;DP=4743;DP4=1897,2492,6,18;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00295172;MQB=1.89357e-10;MQSB=0.922728;RPB=0.941017;SGB=18.096;VDB=0.9963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.2:14482563 chr02:014482563 0 W/14482563-14482563 FN2107-S SNP C -> A AC=1;AN=168;BQB=0.0114331;DP=3401;DP4=1335,2024,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0194061;MQB=0.253036;MQSB=6.83466e-18;RPB=0.813525;SGB=-82.6471;VDB=0.736801;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.2:14487397 chr02:014487397 0 W/14487397-14487397 FN4304-S SNP A -> G AC=2;AN=170;BQB=0.994272;DP=2330;DP4=1087,1141,5,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.75324e-06;MQSB=0.827592;RPB=0.183317;SGB=14.9986;VDB=0.830975;EFF=INTRON(MODIFIER||||288|LOC_Os02g24990|protein_coding|CODING|LOC_Os02g24990.1|2|1) FN3562-S.SNP.2:14488302 chr02:014488302 0 W/14488302-14488302 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.989199;DP=3234;DP4=1324,1811,4,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56355e-09;MQSB=0.769666;RPB=0.167499;SGB=71.6954;VDB=0.36313;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.2:14493441 chr02:014493441 0 W/14493441-14493441 FN2290 SNP G -> A AC=2;AN=192;BQB=0.125573;DP=4622;DP4=2387,1891,24,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.31557e-27;MQSB=0.417057;RPB=0.623338;SGB=8.3696;VDB=0.915181;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.2:14494614 chr02:014494614 0 W/14494614-14494614 FN4125-S SNP C -> T AC=2;AN=182;BQB=0.744267;DP=2784;DP4=1252,1461,15,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.69651e-11;MQSB=0.728839;RPB=0.71028;SGB=98.2417;VDB=0.910689;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.2:14502302 chr02:014502302 0 W/14502302-14502302 FN-59 Single Base Substitution T-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN899-S.SNP.2:14509345 chr02:014509345 0 W/14509345-14509345 FN899-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2380.SNP.2:14513115 chr02:014513115 0 W/14513115-14513115 FN2380 SNP G -> A AC=1;AN=192;BQB=0.513509;DP=4847;DP4=2055,2532,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.80071e-09;MQSB=0.40295;RPB=0.415121;SGB=-14.7687;VDB=0.435229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.2:14519132 chr02:014519132 0 W/14519132-14519132 FN2554-S SNP C -> A AC=1;AN=198;BQB=0.761022;DP=4198;DP4=2014,1979,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000714626;MQB=1.76185e-14;MQSB=0.999512;RPB=0.771071;SGB=86.8856;VDB=0.748757;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R953L|1281|LOC_Os02g25040|protein_coding|CODING|LOC_Os02g25040.1|4|1) 705-6.SNP.2:14519326 chr02:014519326 0 W/14519326-14519326 705-6 Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN2740-S.SNP.2:14519563 chr02:014519563 0 W/14519563-14519563 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.809384;DP=4989;DP4=2519,2213,5,4;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0148326;MQB=0.415708;MQSB=0.908682;RPB=0.469949;SGB=22.2439;VDB=0.683888;EFF=INTRON(MODIFIER||||1281|LOC_Os02g25040|protein_coding|CODING|LOC_Os02g25040.1|3|1) FN3800-S.SNP.2:14524171 chr02:014524171 0 W/14524171-14524171 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.965081;DP=2792;DP4=1293,1371,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.0962e-11;MQSB=0.4235;RPB=0.353114;SGB=76.4186;VDB=0.308156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.2:14528882 chr02:014528882 0 W/14528882-14528882 FN3494-S SNP T -> A AC=1;AN=184;BQB=0.451901;DP=2375;DP4=1166,1133,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.24697e-08;MQSB=0.977211;RPB=0.402946;SGB=2.23696;VDB=0.392815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.2:14545644 chr02:014545644 0 W/14545644-14545644 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3772-S.SNP.2:14546695 chr02:014546695 0 W/14546695-14546695 FN3772-S SNP C -> T AC=1;AN=190;BQB=0.987853;DP=2480;DP4=1102,1177,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00198002;MQSB=1.65077e-07;RPB=0.614652;SGB=30.8803;VDB=0.452509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.2:14548931 chr02:014548931 0 W/14548931-14548931 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.904562;DP=1162;DP4=35,1066,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.13182e-05;MQSB=0.171566;RPB=0.480358;SGB=26.3271;VDB=0.358597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.2:14549956 chr02:014549956 0 W/14549956-14549956 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1284-S.SNP.2:14554350 chr02:014554350 0 W/14554350-14554350 FN1284-S Single Base Substitution T-C INTRON HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2752-S.SNP.2:14556979 chr02:014556979 0 W/14556979-14556979 FN2752-S SNP G -> C AC=1;AN=200;BQB=0.984041;DP=4403;DP4=1947,2250,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.84713e-07;MQSB=0.936617;RPB=0.531797;SGB=16.4591;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.2:14558225 chr02:014558225 0 W/14558225-14558225 FN3661-S SNP G -> A AC=1;AN=190;BQB=0.16671;DP=2786;DP4=1425,1254,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000410298;MQSB=0.846126;RPB=0.0625287;SGB=28.9929;VDB=0.717753;EFF=INTRON(MODIFIER||||278|LOC_Os02g25080|protein_coding|CODING|LOC_Os02g25080.1|2|1) FN3541-S.SNP.2:14565839 chr02:014565839 0 W/14565839-14565839 FN3541-S SNP G -> A AC=2;AN=188;BQB=0.95411;DP=2554;DP4=1348,1150,5,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.86282e-06;MQSB=0.979589;RPB=0.864759;SGB=25.3545;VDB=0.162966;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.2:14566402 chr02:014566402 0 W/14566402-14566402 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.875344;DP=2289;DP4=1152,1024,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31909e-07;MQSB=0.986883;RPB=0.808849;SGB=22.3266;VDB=0.556976;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.2:14569803 chr02:014569803 0 W/14569803-14569803 FN983-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3401-S.SNP.2:14569994 chr02:014569994 0 W/14569994-14569994 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.838749;DP=2882;DP4=1441,1345,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83545e-07;MQSB=0.935806;RPB=0.915391;SGB=23.2751;VDB=0.600856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G548D|808|LOC_Os02g25090|protein_coding|CODING|LOC_Os02g25090.1|5|1) FN2240-S.SNP.2:14570547 chr02:014570547 0 W/14570547-14570547 FN2240-S SNP A -> G AC=1;AN=190;BQB=0.268948;DP=4441;DP4=1969,1964,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09508e-05;MQSB=0.219971;RPB=0.961357;SGB=-50.1963;VDB=0.00612474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D694G|808|LOC_Os02g25090|protein_coding|CODING|LOC_Os02g25090.1|6|1) FN2118-S.SNP.2:14573277 chr02:014573277 0 W/14573277-14573277 FN2118-S SNP C -> A AC=1;AN=168;BQB=0.535657;DP=3369;DP4=1824,1490,20,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58248e-13;MQSB=0.244442;RPB=0.930484;SGB=-77.4832;VDB=0.109229;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R546|647|LOC_Os02g25100|protein_coding|CODING|LOC_Os02g25100.1|4|1) FN2118-S.SNP.2:14573278 chr02:014573278 0 W/14573278-14573278 FN2118-S SNP G -> A AC=1;AN=168;BQB=0.658845;DP=3364;DP4=1833,1477,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.32711e-13;MQSB=0.284786;RPB=0.997762;SGB=-11.926;VDB=0.336822;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R546Q|647|LOC_Os02g25100|protein_coding|CODING|LOC_Os02g25100.1|4|1) FN906-S.SNP.2:14578422 chr02:014578422 0 W/14578422-14578422 FN906-S Single Base Substitution G-A INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN-166.SNP.2:14580100 chr02:014580100 0 W/14580100-14580100 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1109-S.SNP.2:14580953 chr02:014580953 0 W/14580953-14580953 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4080-S.SNP.2:14584966 chr02:014584966 0 W/14584966-14584966 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.917065;DP=2847;DP4=1362,1348,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.72583e-08;MQSB=0.338318;RPB=0.896638;SGB=23.1441;VDB=0.107119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.2:14606479 chr02:014606479 0 W/14606479-14606479 FN3524-S SNP G -> A AC=2;AN=188;BQB=0.885487;DP=2860;DP4=1463,1334,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.60862e-11;MQSB=0.99721;RPB=0.434981;SGB=64.3306;VDB=0.71097;EFF=SPLICE_SITE_REGION(LOW||||527|LOC_Os02g25140|protein_coding|CODING|LOC_Os02g25140.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I139|527|LOC_Os02g25140|protein_coding|CODING|LOC_Os02g25140.1|2|1) FN3774-S.SNP.2:14606479 chr02:014606479 0 W/14606479-14606479 FN3774-S SNP G -> A AC=2;AN=190;BQB=0.796782;DP=2705;DP4=1332,1290,7,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.79338e-12;MQSB=0.989331;RPB=0.991533;SGB=68.0854;VDB=0.922998;EFF=SPLICE_SITE_REGION(LOW||||527|LOC_Os02g25140|protein_coding|CODING|LOC_Os02g25140.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I139|527|LOC_Os02g25140|protein_coding|CODING|LOC_Os02g25140.1|2|1) FN1484-S.SNP.2:14609800 chr02:014609800 0 W/14609800-14609800 FN1484-S Single Base Substitution G-A INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1321-S.SNP.2:14610327 chr02:014610327 0 W/14610327-14610327 FN1321-S Single Base Substitution G-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3681-S.SNP.2:14610977 chr02:014610977 0 W/14610977-14610977 FN3681-S SNP G -> A AC=1;AN=190;BQB=0.671535;DP=2530;DP4=1126,1298,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.17345e-05;MQSB=0.834048;RPB=0.345083;SGB=36.1006;VDB=0.195805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.2:14618080 chr02:014618080 0 W/14618080-14618080 FN1399-S Single Base Substitution C-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3715-S.SNP.2:14618543 chr02:014618543 0 W/14618543-14618543 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.958826;DP=3296;DP4=1622,1571,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.67538e-10;MQSB=0.982826;RPB=0.418707;SGB=67.3108;VDB=0.333474;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.2:14618703 chr02:014618703 0 W/14618703-14618703 FN3503-S SNP C -> A AC=2;AN=188;BQB=0.850008;DP=2986;DP4=1491,1408,12,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.90918e-09;MQSB=0.976062;RPB=0.982684;SGB=67.1521;VDB=0.916456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.2:14622107 chr02:014622107 0 W/14622107-14622107 FN3841-S SNP G -> T AC=2;AN=190;BQB=0.945709;DP=2517;DP4=1296,1130,6,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.10471e-06;MQSB=0.981779;RPB=0.992847;SGB=44.5415;VDB=0.999541;EFF=INTERGENIC(MODIFIER||||||||||1) FN4146-S.SNP.2:14623704 chr02:014623704 0 W/14623704-14623704 FN4146-S SNP T -> C AC=2;AN=170;BQB=0.745603;DP=1636;DP4=659,823,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.26714e-08;MQSB=0.169687;RPB=0.415835;SGB=55.5339;VDB=0.710529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.2:14626305 chr02:014626305 0 W/14626305-14626305 FN3607-S SNP C -> T AC=1;AN=190;BQB=0.649652;DP=2863;DP4=1390,1349,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35426e-07;MQSB=0.959881;RPB=0.991258;SGB=43.2083;VDB=0.861952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.2:14637691 chr02:014637691 0 W/14637691-14637691 FN2486 SNP G -> T AC=1;AN=200;BQB=0.785853;DP=4414;DP4=2060,2082,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.40663e-13;MQSB=0.664102;RPB=0.945858;SGB=50.3263;VDB=0.814813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q1060K|2139|LOC_Os02g25170|protein_coding|CODING|LOC_Os02g25170.1|5|1) FN3826-S.SNP.2:14639578 chr02:014639578 0 W/14639578-14639578 FN3826-S SNP G -> A AC=1;AN=190;BQB=0.6451;DP=2393;DP4=1244,996,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.07065e-10;MQSB=0.983826;RPB=0.260094;SGB=26.2136;VDB=0.116755;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T642|2139|LOC_Os02g25170|protein_coding|CODING|LOC_Os02g25170.1|2|1) FN3790-S.SNP.2:14640203 chr02:014640203 0 W/14640203-14640203 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.882523;DP=2800;DP4=1427,1247,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.78739e-09;MQSB=0.843188;RPB=0.999633;SGB=39.6545;VDB=0.502073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A434V|2139|LOC_Os02g25170|protein_coding|CODING|LOC_Os02g25170.1|2|1) FN476-S.SNP.2:14643479 chr02:014643479 0 W/14643479-14643479 FN476-S Single Base Substitution C-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.2:14643479 chr02:014643479 0 W/14643479-14643479 FN935-S Single Base Substitution C-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN476-S.SNP.2:14643480 chr02:014643480 0 W/14643480-14643480 FN476-S Single Base Substitution C-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.2:14643480 chr02:014643480 0 W/14643480-14643480 FN935-S Single Base Substitution C-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2682-S.SNP.2:14649463 chr02:014649463 0 W/14649463-14649463 FN2682-S SNP A -> T AC=1;AN=200;BQB=0.940198;DP=5079;DP4=2554,2304,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.49932e-12;MQSB=0.942285;RPB=0.983471;SGB=91.1059;VDB=0.0418498;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K903*|1410|LOC_Os02g25180|protein_coding|CODING|LOC_Os02g25180.1|9|1);LOF=(LOC_Os02g25180|LOC_Os02g25180|1|1.00);NMD=(LOC_Os02g25180|LOC_Os02g25180|1|1.00) FN2599-S.SNP.2:14653826 chr02:014653826 0 W/14653826-14653826 FN2599-S SNP C -> A AC=1;AN=198;BQB=0.984336;DP=4301;DP4=1955,2082,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232504;MQB=2.94812e-10;MQSB=0.9824;RPB=0.983847;SGB=12.5396;VDB=0.701568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.2:14655594 chr02:014655594 0 W/14655594-14655594 FN1036-S Single Base Substitution A-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN-243.SNP.2:14657972 chr02:014657972 0 W/14657972-14657972 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN893-S.SNP.2:14658172 chr02:014658172 0 W/14658172-14658172 FN893-S Single Base Substitution G-C INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1646-S.SNP.2:14667059 chr02:014667059 0 W/14667059-14667059 FN1646-S Single Base Substitution C-T INTRON HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN3948-S.SNP.2:14672654 chr02:014672654 0 W/14672654-14672654 FN3948-S SNP C -> A AC=1;AN=168;BQB=0.966023;DP=2328;DP4=1074,1157,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.84905e-10;MQSB=0.931567;RPB=0.968031;SGB=29.4772;VDB=0.461507;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.2:14682026 chr02:014682026 0 W/14682026-14682026 FN760-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g25230 expressed protein SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3713-S.SNP.2:14682585 chr02:014682585 0 W/14682585-14682585 FN3713-S SNP T -> C AC=2;AN=190;BQB=0.981807;DP=2312;DP4=1080,1048,6,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01524e-06;MQSB=0.851907;RPB=0.369236;SGB=21.1058;VDB=0.519837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V202A|810|LOC_Os02g25230|protein_coding|CODING|LOC_Os02g25230.1|1|1) FN-192.SNP.2:14687195 chr02:014687195 0 W/14687195-14687195 FN-192 Single Base Substitution A-G INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2648-S.SNP.2:14689894 chr02:014689894 0 W/14689894-14689894 FN2648-S SNP C -> G AC=1;AN=200;BQB=0.274897;DP=3617;DP4=1921,1350,14,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.49737e-06;MQSB=0.535814;RPB=0.92857;SGB=-56.9157;VDB=0.467619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1674-S.SNP.2:14693630 chr02:014693630 0 W/14693630-14693630 FN1674-S SNP A -> G AC=1;AN=188;BQB=0.640785;DP=3852;DP4=1910,1908,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.91531e-08;MQSB=0.974625;RPB=0.830795;SGB=-35.9944;VDB=0.173104;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.2:14695273 chr02:014695273 0 W/14695273-14695273 FN1192-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN577-S.SNP.2:14697459 chr02:014697459 0 W/14697459-14697459 FN577-S Single Base Substitution C-G INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN-89.SNP.2:14702385 chr02:014702385 0 W/14702385-14702385 FN-89 Single Base Substitution A-G INTRON HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN501-S.SNP.2:14708285 chr02:014708285 0 W/14708285-14708285 FN501-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g25260 retrotransposon protein, putative, unclassified, expressed SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN813-S.SNP.2:14710557 chr02:014710557 0 W/14710557-14710557 FN813-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25260 retrotransposon protein, putative, unclassified, expressed SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN-313.SNP.2:14711854 chr02:014711854 0 W/14711854-14711854 FN-313 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN2344.SNP.2:14716243 chr02:014716243 0 W/14716243-14716243 FN2344 SNP C -> G AC=2;AN=192;BQB=0.519441;DP=4664;DP4=2142,2246,27,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.07633e-33;MQSB=0.871573;RPB=0.714537;SGB=-54.4965;VDB=0.50866;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.2:14720712 chr02:014720712 0 W/14720712-14720712 FN-286 Single Base Substitution G-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3431-S.SNP.2:14720712 chr02:014720712 0 W/14720712-14720712 FN3431-S SNP G -> A AC=2;AN=184;BQB=0.975251;DP=2555;DP4=1225,1257,4,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.39203e-09;MQSB=0.979313;RPB=0.821735;SGB=57.786;VDB=0.0592149;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.2:14720712 chr02:014720712 0 W/14720712-14720712 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2352.SNP.2:14722502 chr02:014722502 0 W/14722502-14722502 FN2352 SNP G -> A AC=1;AN=192;BQB=0.178179;DP=5041;DP4=2445,2246,12,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.34868e-13;MQSB=0.389213;RPB=0.705289;SGB=-179.663;VDB=0.327749;EFF=INTERGENIC(MODIFIER||||||||||1) FN-396.SNP.2:14735881 chr02:014735881 0 W/14735881-14735881 FN-396 Single Base Substitution C-T INTERGENIC HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN3629-S.SNP.2:14737244 chr02:014737244 0 W/14737244-14737244 FN3629-S SNP A -> G AC=1;AN=190;BQB=0.901909;DP=3020;DP4=1350,1543,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000331126;MQB=8.00131e-13;MQSB=0.973625;RPB=0.963122;SGB=99.1879;VDB=0.247063;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.2:14737621 chr02:014737621 0 W/14737621-14737621 FN1182-S Single Base Substitution A-T INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1182-S.SNP.2:14743144 chr02:014743144 0 W/14743144-14743144 FN1182-S Single Base Substitution T-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1182-S.SNP.2:14743146 chr02:014743146 0 W/14743146-14743146 FN1182-S Single Base Substitution T-C INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1660-S.SNP.2:14744257 chr02:014744257 0 W/14744257-14744257 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1064-S.SNP.2:14748595 chr02:014748595 0 W/14748595-14748595 FN1064-S Single Base Substitution T-C INTRON HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1064-S.SNP.2:14748597 chr02:014748597 0 W/14748597-14748597 FN1064-S Single Base Substitution G-A INTRON HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN955-S.SNP.2:14750482 chr02:014750482 0 W/14750482-14750482 FN955-S Single Base Substitution C-T INTRON HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN955-S.SNP.2:14750483 chr02:014750483 0 W/14750483-14750483 FN955-S Single Base Substitution G-A INTRON HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN1061-S.SNP.2:14758665 chr02:014758665 0 W/14758665-14758665 FN1061-S Single Base Substitution T-C INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2407.SNP.2:14763043 chr02:014763043 0 W/14763043-14763043 FN2407 SNP G -> A AC=2;AN=200;BQB=0.958174;DP=4321;DP4=1996,2067,14,22;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=6.22128e-15;MQSB=2.86548e-09;RPB=0.239496;SGB=78.9831;VDB=0.716203;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C252|726|LOC_Os02g25310|protein_coding|CODING|LOC_Os02g25310.1|1|1) FN2430.SNP.2:14766270 chr02:014766270 0 W/14766270-14766270 FN2430 SNP A -> G AC=1;AN=200;BQB=0.990803;DP=4643;DP4=2113,2279,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.60694e-13;MQSB=0.99526;RPB=0.881732;SGB=69.1109;VDB=0.681969;EFF=INTRON(MODIFIER||||482|LOC_Os02g25330|protein_coding|CODING|LOC_Os02g25330.1|1|1) FN2583-S.SNP.2:14766577 chr02:014766577 0 W/14766577-14766577 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.670412;DP=4867;DP4=2044,2512,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.54252e-09;MQSB=0.133237;RPB=0.981675;SGB=40.2696;VDB=0.491214;EFF=INTRON(MODIFIER||||482|LOC_Os02g25330|protein_coding|CODING|LOC_Os02g25330.1|1|1) FN3362-S.SNP.2:14778628 chr02:014778628 0 W/14778628-14778628 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.997675;DP=2885;DP4=1173,1576,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20893e-06;MQSB=0.920768;RPB=0.971891;SGB=32.2261;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.2:14784745 chr02:014784745 0 W/14784745-14784745 FN3456-S SNP C -> G AC=2;AN=184;BQB=0.978887;DP=2788;DP4=1597,1099,17,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.66258e-11;MQSB=0.642809;RPB=0.994659;SGB=98.4821;VDB=0.460212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.2:14785044 chr02:014785044 0 W/14785044-14785044 FN1071-S Single Base Substitution G-A INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN4074-S.SNP.2:14789344 chr02:014789344 0 W/14789344-14789344 FN4074-S SNP A -> T AC=1;AN=182;BQB=0.334076;DP=2993;DP4=1511,1366,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000334113;MQB=2.95481e-05;MQSB=0.982505;RPB=0.184368;SGB=0.617025;VDB=0.124002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V204D|488|LOC_Os02g25370|protein_coding|CODING|LOC_Os02g25370.1|4|1) FN_786-4-1.SNP.2:14790440 chr02:014790440 0 W/14790440-14790440 FN_786-4-1 Single Base Substitution G-C HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN994-S.SNP.2:14790566 chr02:014790566 0 W/14790566-14790566 FN994-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g25370 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. W607-2-1.SNP.2:14791915 chr02:014791915 0 W/14791915-14791915 W607-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-167.SNP.2:14798106 chr02:014798106 0 W/14798106-14798106 FN-167 Single Base Substitution C-A INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2310.SNP.2:14802054 chr02:014802054 0 W/14802054-14802054 FN2310 SNP A -> G AC=1;AN=192;BQB=0.540611;DP=5534;DP4=2325,2210,25,15;HOB=5.42535e-05;ICB=0.000109072;MQ=15;MQ0F=0.325262;MQB=0.488228;MQSB=0;RPB=0.445227;SGB=-224.02;VDB=0.48017;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.2:14806294 chr02:014806294 0 W/14806294-14806294 FN1071-S Single Base Substitution T-G INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN729-S.SNP.2:14807721 chr02:014807721 0 W/14807721-14807721 FN729-S Single Base Substitution C-A INTRON HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. 702-4.SNP.2:14808015 chr02:014808015 0 W/14808015-14808015 702-4 Single Base Substitution C-T INTRON Homo SNo: 1445, Mutant_ID: 702-4, Generation: M2, Mutations: 27, Genes: 28, Seed availability: Yes. FN-106.SNP.2:14819694 chr02:014819694 0 W/14819694-14819694 FN-106 Single Base Substitution T-C INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3565-S.SNP.2:14820177 chr02:014820177 0 W/14820177-14820177 FN3565-S SNP A -> G AC=2;AN=188;BQB=0.942533;DP=2645;DP4=1402,1144,18,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.48295e-22;MQSB=0.994594;RPB=0.986086;SGB=113.937;VDB=0.506808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.2:14825055 chr02:014825055 0 W/14825055-14825055 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.814121;DP=4203;DP4=2001,1961,15,21;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00166548;MQB=2.89973e-06;MQSB=0.812455;RPB=0.968459;SGB=119.242;VDB=0.694057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.2:14825382 chr02:014825382 0 W/14825382-14825382 FN-292 Single Base Substitution C-T INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN2608-S.SNP.2:14829933 chr02:014829933 0 W/14829933-14829933 FN2608-S SNP G -> T AC=1;AN=198;BQB=0.239338;DP=4212;DP4=1913,2084,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000612487;MQSB=0.863392;RPB=0.726596;SGB=8.58354;VDB=0.871535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.2:14835839 chr02:014835839 0 W/14835839-14835839 FN1740-S SNP G -> A AC=1;AN=188;BQB=0.647017;DP=2128;DP4=1102,967,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.99264e-06;MQSB=0.775793;RPB=0.705189;SGB=-35.5377;VDB=0.0814763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.2:14838526 chr02:014838526 0 W/14838526-14838526 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.531598;DP=2784;DP4=1382,1281,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.37361e-08;MQSB=0.989073;RPB=0.756539;SGB=50.9207;VDB=0.175109;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.2:14841066 chr02:014841066 0 W/14841066-14841066 FN3050-S SNP G -> C AC=1;AN=184;BQB=0.9606;DP=3196;DP4=1739,1287,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.210263;MQB=0.686183;MQSB=4.81127e-14;RPB=0.991769;SGB=5.28054;VDB=0.86937;EFF=INTRON(MODIFIER||||1284|LOC_Os02g25430|protein_coding|CODING|LOC_Os02g25430.1|1|1) FN3900-S.SNP.2:14842492 chr02:014842492 0 W/14842492-14842492 FN3900-S SNP C -> T AC=2;AN=158;BQB=0.888302;DP=2418;DP4=1126,1198,9,8;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0.13689;MQB=0.51211;MQSB=2.33012e-40;RPB=0.993728;SGB=47.5512;VDB=0.147712;EFF=INTRON(MODIFIER||||1284|LOC_Os02g25430|protein_coding|CODING|LOC_Os02g25430.1|2|1) FN-375.SNP.2:14847043 chr02:014847043 0 W/14847043-14847043 FN-375 Single Base Substitution T-C INTRON HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3785-S.SNP.2:14849318 chr02:014849318 0 W/14849318-14849318 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.61737;DP=2768;DP4=1352,1324,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00229535;MQSB=0.757527;RPB=0.200845;SGB=18.3316;VDB=0.473837;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L715|755|LOC_Os02g25440|protein_coding|CODING|LOC_Os02g25440.1|8|1) FN3536-S.SNP.2:14860495 chr02:014860495 0 W/14860495-14860495 FN3536-S SNP T -> A AC=1;AN=188;BQB=0.999977;DP=2925;DP4=1353,1417,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.81569e-06;MQSB=0.825175;RPB=0.996279;SGB=44.4357;VDB=0.954548;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.2:14860996 chr02:014860996 0 W/14860996-14860996 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.998019;DP=2898;DP4=1530,1290,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47766e-07;MQSB=0.993845;RPB=0.994157;SGB=49.0954;VDB=0.302434;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.2:14862684 chr02:014862684 0 W/14862684-14862684 FN898-S Single Base Substitution C-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2273-S.SNP.2:14864703 chr02:014864703 0 W/14864703-14864703 FN2273-S SNP G -> A AC=2;AN=190;BQB=0.901914;DP=4606;DP4=2017,2237,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000217108;MQB=5.46982e-13;MQSB=0.055187;RPB=0.769097;SGB=85.8548;VDB=0.769629;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.2:14865767 chr02:014865767 0 W/14865767-14865767 FN463-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN914-S.SNP.2:14866176 chr02:014866176 0 W/14866176-14866176 FN914-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1451-S.SNP.2:14867574 chr02:014867574 0 W/14867574-14867574 FN1451-S Single Base Substitution T-G INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN712-S.SNP.2:14870314 chr02:014870314 0 W/14870314-14870314 FN712-S Single Base Substitution A-T SPLICE_SITE_REGION HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1388-S.SNP.2:14874511 chr02:014874511 0 W/14874511-14874511 FN1388-S Single Base Substitution G-A INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2588-S.SNP.2:14876008 chr02:014876008 0 W/14876008-14876008 FN2588-S SNP G -> T AC=1;AN=198;BQB=0.814165;DP=4312;DP4=2213,1884,16,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000463822;MQB=4.79797e-13;MQSB=0.211216;RPB=0.952247;SGB=-41.0942;VDB=0.936685;EFF=INTRON(MODIFIER||||626|LOC_Os02g25480|protein_coding|CODING|LOC_Os02g25480.1|2|1) FN1384-S.SNP.2:14880048 chr02:014880048 0 W/14880048-14880048 FN1384-S Single Base Substitution C-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN880-S.SNP.2:14885130 chr02:014885130 0 W/14885130-14885130 FN880-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g25490 retrotransposon protein, putative, Ty1-copia subclass SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1382-S.SNP.2:14886056 chr02:014886056 0 W/14886056-14886056 FN1382-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25490 retrotransposon protein, putative, Ty1-copia subclass SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2608-S.SNP.2:14886690 chr02:014886690 0 W/14886690-14886690 FN2608-S SNP G -> T AC=1;AN=198;BQB=0.55306;DP=4459;DP4=2127,2103,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0365553;MQB=0.00451307;MQSB=2.34013e-06;RPB=0.266833;SGB=24.1541;VDB=0.0722354;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.2:14886691 chr02:014886691 0 W/14886691-14886691 FN2608-S SNP A -> T AC=1;AN=198;BQB=0.849903;DP=4464;DP4=2117,2124,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0360663;MQB=0.000446183;MQSB=8.35863e-06;RPB=0.452783;SGB=26.7492;VDB=0.143545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.2:14890120 chr02:014890120 0 W/14890120-14890120 FN3540-S SNP C -> T AC=2;AN=188;BQB=0.939449;DP=2872;DP4=1376,1428,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.07383e-14;MQSB=0.990373;RPB=0.878606;SGB=117.128;VDB=0.777199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.2:14892094 chr02:014892094 0 W/14892094-14892094 FN3319-S SNP G -> T AC=1;AN=184;BQB=0.973529;DP=2760;DP4=1357,1285,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.05541e-06;MQSB=0.950277;RPB=0.783697;SGB=21.6609;VDB=0.58687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D254Y|511|LOC_Os02g25500|protein_coding|CODING|LOC_Os02g25500.1|3|1) FN-134.SNP.2:14893121 chr02:014893121 0 W/14893121-14893121 FN-134 Single Base Substitution T-C INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2545-S.SNP.2:14894339 chr02:014894339 0 W/14894339-14894339 FN2545-S SNP A -> G AC=1;AN=198;BQB=0.911704;DP=3878;DP4=1625,2075,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.41592e-08;MQSB=0.736818;RPB=0.968829;SGB=36.5539;VDB=0.254138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.2:14894465 chr02:014894465 0 W/14894465-14894465 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.856856;DP=4284;DP4=1996,2015,25,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.2737e-23;MQSB=0.996681;RPB=0.125594;SGB=191.998;VDB=0.151514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.2:14896674 chr02:014896674 0 W/14896674-14896674 FN3460-S SNP A -> G AC=1;AN=184;BQB=0.776446;DP=3227;DP4=1427,1687,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.2796e-05;MQSB=0.93348;RPB=0.959819;SGB=28.7043;VDB=0.252521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.2:14898004 chr02:014898004 0 W/14898004-14898004 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.834775;DP=4880;DP4=2281,2379,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24417e-16;MQSB=0.980348;RPB=0.887797;SGB=23.9365;VDB=0.760185;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.2:14903496 chr02:014903496 0 W/14903496-14903496 FN748-S Single Base Substitution C-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1334-S.SNP.2:14918929 chr02:014918929 0 W/14918929-14918929 FN1334-S Single Base Substitution C-T INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN445-S.SNP.2:14920701 chr02:014920701 0 W/14920701-14920701 FN445-S Single Base Substitution T-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1514-S.SNP.2:14922047 chr02:014922047 0 W/14922047-14922047 FN1514-S Single Base Substitution A-C SYNONYMOUS_CODING Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3759-S.SNP.2:14924873 chr02:014924873 0 W/14924873-14924873 FN3759-S SNP C -> A AC=1;AN=190;BQB=0.999989;DP=2271;DP4=1037,1071,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.36151e-07;MQSB=0.998719;RPB=0.54812;SGB=28.9929;VDB=0.79976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.2:14925417 chr02:014925417 0 W/14925417-14925417 FN3553-S SNP G -> A AC=1;AN=188;BQB=0.931448;DP=2328;DP4=1072,1197,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=9.46573e-06;MQSB=0.993478;RPB=0.995996;SGB=25.3545;VDB=0.187503;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.2:14931814 chr02:014931814 0 W/14931814-14931814 FN-111 Single Base Substitution C-T STOP_GAINED HOMO LOC_Os02g25560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN-169.SNP.2:14940690 chr02:014940690 0 W/14940690-14940690 FN-169 Single Base Substitution C-G INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2539-S.SNP.2:14945481 chr02:014945481 0 W/14945481-14945481 FN2539-S SNP T -> A AC=1;AN=198;BQB=0.990907;DP=4392;DP4=1880,2273,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.21637e-09;MQSB=0.98854;RPB=0.992977;SGB=26.7492;VDB=0.331828;EFF=INTRON(MODIFIER||||665|LOC_Os02g25580|protein_coding|CODING|LOC_Os02g25580.1|17|1),INTRON(MODIFIER||||567|LOC_Os02g25580|protein_coding|CODING|LOC_Os02g25580.2|13|1) FN1385-S.SNP.2:14945829 chr02:014945829 0 W/14945829-14945829 FN1385-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g25580 Sec1 family transport protein, putative, expressed SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1012-S.SNP.2:14962602 chr02:014962602 0 W/14962602-14962602 FN1012-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2215-S.SNP.2:14963154 chr02:014963154 0 W/14963154-14963154 FN2215-S SNP G -> C AC=2;AN=190;BQB=0.979152;DP=3357;DP4=1650,1337,13,17;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000297885;MQB=3.04165e-11;MQSB=1.11233e-12;RPB=0.997565;SGB=131.065;VDB=0.927989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aGg|T28R|120|LOC_Os02g25590|protein_coding|CODING|LOC_Os02g25590.1|1|1) W464-2-1.SNP.2:14968834 chr02:014968834 0 W/14968834-14968834 W464-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-400.SNP.2:14976411 chr02:014976411 0 W/14976411-14976411 FN-400 Single Base Substitution A-T INTERGENIC HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2593-S.SNP.2:14984942 chr02:014984942 0 W/14984942-14984942 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.641651;DP=4198;DP4=2168,1750,18,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.55346e-15;MQSB=0.972832;RPB=0.755607;SGB=141.451;VDB=0.298147;EFF=INTRON(MODIFIER||||384|LOC_Os02g25630|protein_coding|CODING|LOC_Os02g25630.1|2|1) FN1423-S.SNP.2:14986451 chr02:014986451 0 W/14986451-14986451 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2758-S.SNP.2:14987256 chr02:014987256 0 W/14987256-14987256 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.915288;DP=4457;DP4=1991,2260,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11348e-10;MQSB=0.946554;RPB=0.129419;SGB=54.6902;VDB=0.232648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.2:14987686 chr02:014987686 0 W/14987686-14987686 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.600237;DP=3679;DP4=1992,1498,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.56018e-11;MQSB=0.00132782;RPB=0.713853;SGB=61.7198;VDB=0.0301081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.2:15000530 chr02:015000530 0 W/15000530-15000530 FN1427-S Single Base Substitution A-T INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2755-S.SNP.2:15002416 chr02:015002416 0 W/15002416-15002416 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.910883;DP=4720;DP4=2399,2085,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67623e-09;MQSB=0.874333;RPB=0.475452;SGB=86.5007;VDB=0.967139;EFF=INTRON(MODIFIER||||157|LOC_Os02g25650|protein_coding|CODING|LOC_Os02g25650.1|2|1) FN-102.SNP.2:15003444 chr02:015003444 0 W/15003444-15003444 FN-102 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25650 expressed protein SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2483.SNP.2:15003444 chr02:015003444 0 W/15003444-15003444 FN2483 SNP G -> A AC=1;AN=200;BQB=0.310572;DP=4889;DP4=2384,2106,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46162e-13;MQSB=0.948366;RPB=0.667951;SGB=79.9264;VDB=0.515487;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S40L|157|LOC_Os02g25650|protein_coding|CODING|LOC_Os02g25650.1|2|1) FN3626-S.SNP.2:15003444 chr02:015003444 0 W/15003444-15003444 FN3626-S SNP G -> A AC=2;AN=190;BQB=0.958263;DP=2636;DP4=1470,1019,16,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.74048e-12;MQSB=0.913913;RPB=0.894439;SGB=75.1932;VDB=0.0629864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S40L|157|LOC_Os02g25650|protein_coding|CODING|LOC_Os02g25650.1|2|1) FN2275-S.SNP.2:15008774 chr02:015008774 0 W/15008774-15008774 FN2275-S SNP T -> A AC=1;AN=190;BQB=0.949603;DP=3881;DP4=1504,2053,19,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.36033e-16;MQSB=1.85773e-08;RPB=0.923347;SGB=144.727;VDB=0.6232;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.2:15009193 chr02:015009193 0 W/15009193-15009193 FN2275-S SNP C -> A AC=1;AN=190;BQB=0.563337;DP=3435;DP4=1523,1627,20,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45424e-14;MQSB=0.000770851;RPB=0.971267;SGB=117.403;VDB=0.302697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.2:15009194 chr02:015009194 0 W/15009194-15009194 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.743006;DP=3428;DP4=1503,1600,22,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55192e-17;MQSB=0.0019154;RPB=0.845316;SGB=61.9679;VDB=0.393717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.2:15009195 chr02:015009195 0 W/15009195-15009195 FN2275-S SNP C -> T AC=1;AN=190;BQB=0.896898;DP=3435;DP4=1578,1613,20,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.20492e-15;MQSB=0.000997988;RPB=0.982482;SGB=59.414;VDB=0.248459;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.2:15012017 chr02:015012017 0 W/15012017-15012017 FN1043-S Single Base Substitution A-G INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN836-S.SNP.2:15013716 chr02:015013716 0 W/15013716-15013716 FN836-S Single Base Substitution A-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1492-S.SNP.2:15018208 chr02:015018208 0 W/15018208-15018208 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN3786-S.SNP.2:15026846 chr02:015026846 0 W/15026846-15026846 FN3786-S SNP C -> A AC=2;AN=190;BQB=0.826656;DP=3012;DP4=1211,1679,9,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.14128e-14;MQSB=0.395766;RPB=0.936711;SGB=92.9626;VDB=0.604507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.2:15031788 chr02:015031788 0 W/15031788-15031788 FN2789-S SNP A -> G AC=1;AN=198;BQB=0.9371;DP=3811;DP4=2021,1525,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.48444e-06;MQSB=0.814894;RPB=0.76414;SGB=36.5539;VDB=0.466289;EFF=INTRON(MODIFIER||||106|LOC_Os02g25680|protein_coding|CODING|LOC_Os02g25680.2|2|1) FN1203-S.SNP.2:15037288 chr02:015037288 0 W/15037288-15037288 FN1203-S Single Base Substitution C-A INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1318-S.SNP.2:15037480 chr02:015037480 0 W/15037480-15037480 FN1318-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN4087-S.SNP.2:15052777 chr02:015052777 0 W/15052777-15052777 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.710277;DP=3078;DP4=1494,1511,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.94207e-06;MQSB=0.973692;RPB=0.672621;SGB=48.6223;VDB=0.956295;EFF=INTRON(MODIFIER||||686|LOC_Os02g25710|protein_coding|CODING|LOC_Os02g25710.1|2|1) FN487-S.SNP.2:15055315 chr02:015055315 0 W/15055315-15055315 FN487-S Single Base Substitution C-T INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN4234-S.SNP.2:15056048 chr02:015056048 0 W/15056048-15056048 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.978511;DP=2376;DP4=1242,1058,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=2.4415e-05;MQSB=0.000335118;RPB=0.929822;SGB=34.878;VDB=0.541747;EFF=SPLICE_SITE_REGION(LOW||||686|LOC_Os02g25710|protein_coding|CODING|LOC_Os02g25710.1|8|1),INTRON(MODIFIER||||686|LOC_Os02g25710|protein_coding|CODING|LOC_Os02g25710.1|8|1) FN2754-S.SNP.2:15060144 chr02:015060144 0 W/15060144-15060144 FN2754-S SNP A -> T AC=1;AN=200;BQB=0.572663;DP=4985;DP4=2489,2303,3,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00581745;MQB=0.024357;MQSB=0.799347;RPB=0.0223848;SGB=13.8539;VDB=0.367739;EFF=INTRON(MODIFIER||||932|LOC_Os02g25720|protein_coding|CODING|LOC_Os02g25720.1|1|1) FN1042-S.SNP.2:15062622 chr02:015062622 0 W/15062622-15062622 FN1042-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g25720 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1056-S.SNP.2:15064120 chr02:015064120 0 W/15064120-15064120 FN1056-S Single Base Substitution T-A INTRON HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN4177-S.SNP.2:15067627 chr02:015067627 0 W/15067627-15067627 FN4177-S SNP A -> G AC=1;AN=170;BQB=0.892215;DP=2326;DP4=1148,1117,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000292092;MQSB=0.822801;RPB=0.483333;SGB=30.1021;VDB=0.621812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q290R|300|LOC_Os02g25730|protein_coding|CODING|LOC_Os02g25730.1|3|1) FN2780-S.SNP.2:15071134 chr02:015071134 0 W/15071134-15071134 FN2780-S SNP C -> G AC=1;AN=198;BQB=0.985548;DP=4129;DP4=1912,1983,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.43761e-08;MQSB=0.642987;RPB=0.627827;SGB=86.8856;VDB=0.813108;EFF=INTRON(MODIFIER||||1102|LOC_Os02g25740|protein_coding|CODING|LOC_Os02g25740.1|7|1) FN2357.SNP.2:15071229 chr02:015071229 0 W/15071229-15071229 FN2357 SNP T -> A AC=2;AN=192;BQB=0.539064;DP=4756;DP4=2044,2307,31,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.32037e-36;MQSB=0.932745;RPB=0.166824;SGB=303.822;VDB=0.0336367;EFF=INTRON(MODIFIER||||1102|LOC_Os02g25740|protein_coding|CODING|LOC_Os02g25740.1|7|1) FN2229-S.SNP.2:15075449 chr02:015075449 0 W/15075449-15075449 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.601854;DP=6311;DP4=2825,2784,17,22;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0499129;MQB=0.997852;MQSB=0.0258358;RPB=0.969932;SGB=172.05;VDB=0.825489;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.2:15075708 chr02:015075708 0 W/15075708-15075708 FN1527-S Single Base Substitution T-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1280-S.SNP.2:15077683 chr02:015077683 0 W/15077683-15077683 FN1280-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3434-S.SNP.2:15077683 chr02:015077683 0 W/15077683-15077683 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.586108;DP=2931;DP4=1530,1295,19,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.86563e-18;MQSB=0.997908;RPB=0.882973;SGB=120.271;VDB=0.879252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.2:15082260 chr02:015082260 0 W/15082260-15082260 FN3311-S SNP G -> T AC=2;AN=184;BQB=0.458397;DP=3216;DP4=1425,1631,22,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.83077e-16;MQSB=0.374478;RPB=0.258853;SGB=184.396;VDB=0.921546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.2:15084758 chr02:015084758 0 W/15084758-15084758 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.890768;DP=3588;DP4=1570,1889,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.87949e-12;MQSB=0.957387;RPB=0.999891;SGB=80.3949;VDB=0.518255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.2:15090141 chr02:015090141 0 W/15090141-15090141 FN-183 Single Base Substitution A-G INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3700-S.SNP.2:15090220 chr02:015090220 0 W/15090220-15090220 FN3700-S SNP A -> G AC=1;AN=190;BQB=0.994832;DP=2784;DP4=1329,1339,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52013e-10;MQSB=0.975258;RPB=0.931669;SGB=11.8805;VDB=0.0322943;EFF=INTRON(MODIFIER||||240|LOC_Os02g25760|protein_coding|CODING|LOC_Os02g25760.1|3|1) FN-198.SNP.2:15091183 chr02:015091183 0 W/15091183-15091183 FN-198 Single Base Substitution G-A INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN1422-S.SNP.2:15091241 chr02:015091241 0 W/15091241-15091241 FN1422-S Single Base Substitution G-A INTRON Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1749-S.SNP.2:15093320 chr02:015093320 0 W/15093320-15093320 FN1749-S SNP C -> T AC=2;AN=188;BQB=0.492372;DP=1678;DP4=1016,573,15,9;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00536353;MQB=0.000199426;MQSB=0.800921;RPB=0.950321;SGB=74.9605;VDB=0.375882;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.2:15093540 chr02:015093540 0 W/15093540-15093540 FN2619-S SNP T -> A AC=1;AN=198;BQB=0.603531;DP=4147;DP4=2199,1602,25,17;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00675187;MQB=3.63343e-14;MQSB=0.667882;RPB=0.526799;SGB=47.6323;VDB=0.779069;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.2:15097934 chr02:015097934 0 W/15097934-15097934 FN1369-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN1525-S.SNP.2:15097934 chr02:015097934 0 W/15097934-15097934 FN1525-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3630-S.SNP.2:15101898 chr02:015101898 0 W/15101898-15101898 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.925741;DP=2634;DP4=1126,1426,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6062e-05;MQSB=0.807347;RPB=0.975074;SGB=30.8803;VDB=0.283405;EFF=INTRON(MODIFIER||||1620|LOC_Os02g25770|protein_coding|CODING|LOC_Os02g25770.1|5|1) FN1136-19-S.SNP.2:15103372 chr02:015103372 0 W/15103372-15103372 FN1136-19-S Single Base Substitution C-T INTRON Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1136-S.SNP.2:15103372 chr02:015103372 0 W/15103372-15103372 FN1136-S Single Base Substitution C-T INTRON HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN4311-S.SNP.2:15105120 chr02:015105120 0 W/15105120-15105120 FN4311-S SNP C -> A AC=2;AN=170;BQB=0.847361;DP=2290;DP4=856,1321,4,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000436681;MQB=1.69298e-09;MQSB=0.954773;RPB=0.915737;SGB=61.2001;VDB=0.801087;EFF=INTRON(MODIFIER||||1620|LOC_Os02g25770|protein_coding|CODING|LOC_Os02g25770.1|7|1) FN4311-S.SNP.2:15105121 chr02:015105121 0 W/15105121-15105121 FN4311-S SNP T -> A AC=2;AN=170;BQB=0.760949;DP=2301;DP4=669,1277,10,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000434594;MQB=4.64446e-11;MQSB=0.908706;RPB=0.665245;SGB=-38.7704;VDB=0.652478;EFF=INTRON(MODIFIER||||1620|LOC_Os02g25770|protein_coding|CODING|LOC_Os02g25770.1|7|1) FN2566-S.SNP.2:15105215 chr02:015105215 0 W/15105215-15105215 FN2566-S SNP T -> C AC=1;AN=198;BQB=0.0487347;DP=4015;DP4=2004,1728,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00259309;MQSB=0.999729;RPB=0.498559;SGB=25.7686;VDB=0.996798;EFF=INTRON(MODIFIER||||1620|LOC_Os02g25770|protein_coding|CODING|LOC_Os02g25770.1|7|1) FN1736-S.SNP.2:15108203 chr02:015108203 0 W/15108203-15108203 FN1736-S SNP T -> C AC=2;AN=188;BQB=0.0592456;DP=3873;DP4=1918,1864,24,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.62891e-27;MQSB=0.965289;RPB=0.995331;SGB=-238.877;VDB=0.64223;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.2:15108711 chr02:015108711 0 W/15108711-15108711 FN543-S Single Base Substitution A-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2245-S.SNP.2:15115358 chr02:015115358 0 W/15115358-15115358 FN2245-S SNP G -> A AC=1;AN=190;BQB=0.963577;DP=4829;DP4=1815,2663,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.22075;MQB=0.999561;MQSB=4.92276e-42;RPB=0.99904;SGB=14.7784;VDB=0.877023;EFF=INTRON(MODIFIER||||1432|LOC_Os02g25790|protein_coding|CODING|LOC_Os02g25790.1|1|1) FN1372-S.SNP.2:15116279 chr02:015116279 0 W/15116279-15116279 FN1372-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN-237.SNP.2:15117924 chr02:015117924 0 W/15117924-15117924 FN-237 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25800 retrotransposon protein, putative, unclassified, expressed SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2606-S.SNP.2:15119699 chr02:015119699 0 W/15119699-15119699 FN2606-S SNP C -> A AC=1;AN=198;BQB=0.587457;DP=4109;DP4=2080,1747,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.77448e-06;MQSB=0.996213;RPB=0.998257;SGB=22.1736;VDB=0.354937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.2:15122800 chr02:015122800 0 W/15122800-15122800 FN2634-S SNP G -> A AC=2;AN=200;BQB=0.839658;DP=4701;DP4=2157,2288,28,26;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=4.94358e-13;MQSB=0.999748;RPB=0.393597;SGB=243.077;VDB=0.637886;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L1142|1707|LOC_Os02g25810|protein_coding|CODING|LOC_Os02g25810.1|5|1) FN-256.SNP.2:15128365 chr02:015128365 0 W/15128365-15128365 FN-256 Single Base Substitution C-A INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN-173.SNP.2:15135977 chr02:015135977 0 W/15135977-15135977 FN-173 Single Base Substitution T-C INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN1113-S.SNP.2:15145791 chr02:015145791 0 W/15145791-15145791 FN1113-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25850 transposon protein, putative, Pong sub-class, expressed SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1113-S.SNP.2:15145793 chr02:015145793 0 W/15145793-15145793 FN1113-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g25850 transposon protein, putative, Pong sub-class, expressed SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3524-S.SNP.2:15148528 chr02:015148528 0 W/15148528-15148528 FN3524-S SNP A -> G AC=1;AN=188;BQB=0.418463;DP=3069;DP4=1769,1109,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.86252e-12;MQSB=0.967334;RPB=0.679557;SGB=53.7007;VDB=0.556921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.2:15149405 chr02:015149405 0 W/15149405-15149405 FN3550-S SNP G -> T AC=1;AN=188;BQB=0.989117;DP=2573;DP4=1282,1236,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74827e-07;MQSB=0.623872;RPB=0.821904;SGB=28.8977;VDB=0.056073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.2:15154967 chr02:015154967 0 W/15154967-15154967 FN2136-S SNP C -> A AC=1;AN=168;BQB=0.804014;DP=4360;DP4=2195,2118,16,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29784e-17;MQSB=0.999858;RPB=0.190918;SGB=70.8011;VDB=0.549741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.2:15157284 chr02:015157284 0 W/15157284-15157284 FN1658-S SNP G -> T AC=1;AN=188;BQB=0.281283;DP=3531;DP4=1852,1646,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.46996e-07;MQSB=0.999452;RPB=0.707973;SGB=-13.3699;VDB=0.426413;EFF=INTRON(MODIFIER||||371|LOC_Os02g25870|protein_coding|CODING|LOC_Os02g25870.1|8|1) FN1113-S.SNP.2:15160521 chr02:015160521 0 W/15160521-15160521 FN1113-S Single Base Substitution C-T INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2257-S.SNP.2:15166624 chr02:015166624 0 W/15166624-15166624 FN2257-S SNP T -> A AC=1;AN=190;BQB=0.956034;DP=4902;DP4=2286,2232,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000407997;MQB=4.37975e-07;MQSB=0.992046;RPB=0.613346;SGB=27.4193;VDB=0.89167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1648-S.SNP.2:15177006 chr02:015177006 0 W/15177006-15177006 FN1648-S Single Base Substitution G-A INTERGENIC HET SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN701-S.SNP.2:15182097 chr02:015182097 0 W/15182097-15182097 FN701-S Single Base Substitution G-T INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-30.SNP.2:15182261 chr02:015182261 0 W/15182261-15182261 FN-30 Single Base Substitution C-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN-96.SNP.2:15184745 chr02:015184745 0 W/15184745-15184745 FN-96 Single Base Substitution A-G INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN1336-S.SNP.2:15186206 chr02:015186206 0 W/15186206-15186206 FN1336-S Single Base Substitution G-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2529-S.SNP.2:15186886 chr02:015186886 0 W/15186886-15186886 FN2529-S SNP G -> C AC=2;AN=198;BQB=0.565876;DP=4524;DP4=2388,1790,17,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.58701e-15;MQSB=0.945057;RPB=0.931064;SGB=123.071;VDB=0.707408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.2:15187581 chr02:015187581 0 W/15187581-15187581 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.981932;DP=2614;DP4=1194,1266,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.06e-06;MQSB=0.927503;RPB=0.999875;SGB=48.7425;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.2:15191885 chr02:015191885 0 W/15191885-15191885 FN282-S Single Base Substitution T-C INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN-410.SNP.2:15193096 chr02:015193096 0 W/15193096-15193096 FN-410 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g25900 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2446.SNP.2:15193628 chr02:015193628 0 W/15193628-15193628 FN2446 SNP A -> G AC=1;AN=200;BQB=0.997741;DP=4088;DP4=2028,1819,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.5715e-09;MQSB=0.735049;RPB=0.373189;SGB=58.8698;VDB=0.0612852;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K181R|1089|LOC_Os02g25900|protein_coding|CODING|LOC_Os02g25900.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K181R|1089|LOC_Os02g25900|protein_coding|CODING|LOC_Os02g25900.1|2|1) FN3420-S.SNP.2:15196037 chr02:015196037 0 W/15196037-15196037 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.979977;DP=2707;DP4=1453,1203,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.7763e-06;MQSB=0.999099;RPB=0.495619;SGB=35.1773;VDB=0.886285;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S984L|1089|LOC_Os02g25900|protein_coding|CODING|LOC_Os02g25900.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S984L|1089|LOC_Os02g25900|protein_coding|CODING|LOC_Os02g25900.1|2|1) FN2583-S.SNP.2:15198824 chr02:015198824 0 W/15198824-15198824 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.999162;DP=3507;DP4=1520,1421,7,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000570288;MQB=9.28112e-06;MQSB=8.04009e-31;RPB=0.765927;SGB=32.0901;VDB=0.157699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.2:15199096 chr02:015199096 0 W/15199096-15199096 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.932887;DP=3995;DP4=1900,1872,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000254435;MQSB=0.011609;RPB=0.959766;SGB=26.3271;VDB=0.109713;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.2:15201081 chr02:015201081 0 W/15201081-15201081 FN4104-S SNP A -> T AC=2;AN=182;BQB=0.187381;DP=2902;DP4=1533,1252,13,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00034459;MQB=6.87134e-12;MQSB=0.95437;RPB=0.138023;SGB=12.7039;VDB=0.779859;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.2:15203667 chr02:015203667 0 W/15203667-15203667 FN-283 Single Base Substitution A-G INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3455-S.SNP.2:15204393 chr02:015204393 0 W/15204393-15204393 FN3455-S SNP T -> A AC=1;AN=184;BQB=0.951975;DP=2906;DP4=1415,1353,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81977e-11;MQSB=0.985008;RPB=0.587319;SGB=71.3514;VDB=0.212577;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I150F|211|LOC_Os02g25910|protein_coding|CODING|LOC_Os02g25910.1|4|1) FN2196-S.SNP.2:15208476 chr02:015208476 0 W/15208476-15208476 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.967113;DP=3857;DP4=1781,1736,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00233342;MQB=7.20757e-09;MQSB=0.859613;RPB=0.777759;SGB=100.07;VDB=0.481045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.2:15208597 chr02:015208597 0 W/15208597-15208597 FN2581-S SNP A -> T AC=1;AN=198;BQB=0.0125631;DP=3778;DP4=1823,1530,6,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35598e-07;MQSB=0.706682;RPB=0.404686;SGB=-124.03;VDB=0.38576;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.2:15211541 chr02:015211541 0 W/15211541-15211541 FN3517-S SNP T -> C AC=1;AN=188;BQB=0.576889;DP=2823;DP4=1399,1354,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.72965e-07;MQSB=0.968988;RPB=0.133784;SGB=20.9896;VDB=0.225991;EFF=INTRON(MODIFIER||||315|LOC_Os02g25920|protein_coding|CODING|LOC_Os02g25920.1|2|1) FN1565-S.SNP.2:15211763 chr02:015211763 0 W/15211763-15211763 FN1565-S Single Base Substitution A-G INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN506-S.SNP.2:15217014 chr02:015217014 0 W/15217014-15217014 FN506-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2081-S.SNP.2:15225342 chr02:015225342 0 W/15225342-15225342 FN2081-S SNP T -> G AC=1;AN=168;BQB=0.453332;DP=3138;DP4=1752,1348,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.29025e-07;MQSB=0.953211;RPB=0.809292;SGB=-57.0838;VDB=0.600127;EFF=INTRON(MODIFIER||||115|LOC_Os02g25940|protein_coding|CODING|LOC_Os02g25940.1|2|1) FN456-S.SNP.2:15240744 chr02:015240744 0 W/15240744-15240744 FN456-S Single Base Substitution G-A INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2492.SNP.2:15245982 chr02:015245982 0 W/15245982-15245982 FN2492 SNP G -> T AC=1;AN=200;BQB=0.634954;DP=4221;DP4=1885,2152,9,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000710732;MQB=1.75638e-08;MQSB=0.32821;RPB=0.846955;SGB=32.0901;VDB=0.949047;EFF=INTRON(MODIFIER||||1980|LOC_Os02g25970|protein_coding|CODING|LOC_Os02g25970.1|8|1) FN1515-S.SNP.2:15246021 chr02:015246021 0 W/15246021-15246021 FN1515-S Single Base Substitution C-T INTRON HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2229-S.SNP.2:15261206 chr02:015261206 0 W/15261206-15261206 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.807175;DP=3517;DP4=1800,1316,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42668e-12;MQSB=0.945273;RPB=0.841967;SGB=99.1879;VDB=0.85458;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R42W|213|LOC_Os02g25990|protein_coding|CODING|LOC_Os02g25990.1|1|1) FN3524-S.SNP.2:15262017 chr02:015262017 0 W/15262017-15262017 FN3524-S SNP C -> T AC=1;AN=188;BQB=0.921663;DP=2468;DP4=1200,1174,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5339e-08;MQSB=0.940284;RPB=0.632754;SGB=53.5223;VDB=0.172156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.2:15266016 chr02:015266016 0 W/15266016-15266016 FN2771-S SNP T -> A AC=1;AN=198;BQB=0.999814;DP=3999;DP4=1847,1951,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0619e-09;MQSB=0.822797;RPB=0.994325;SGB=43.7442;VDB=0.355613;EFF=INTRON(MODIFIER||||397|LOC_Os02g26014|protein_coding|CODING|LOC_Os02g26014.1|5|1) FN2648-S.SNP.2:15275271 chr02:015275271 0 W/15275271-15275271 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.937913;DP=4898;DP4=2390,2272,11,19;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00183748;MQB=4.52765e-13;MQSB=0.000552768;RPB=0.592734;SGB=132.552;VDB=0.391833;EFF=INTRON(MODIFIER||||397|LOC_Os02g26014|protein_coding|CODING|LOC_Os02g26014.1|5|1) FN4051-S.SNP.2:15275278 chr02:015275278 0 W/15275278-15275278 FN4051-S SNP C -> A AC=2;AN=168;BQB=0.930791;DP=2760;DP4=1357,1290,20,16;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00217391;MQB=1.15443e-07;MQSB=0.380149;RPB=0.998505;SGB=113.657;VDB=0.373935;EFF=INTRON(MODIFIER||||397|LOC_Os02g26014|protein_coding|CODING|LOC_Os02g26014.1|5|1) FN4163-S.SNP.2:15277246 chr02:015277246 0 W/15277246-15277246 FN4163-S SNP C -> T AC=2;AN=170;BQB=0.932989;DP=2214;DP4=991,1134,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.75831e-14;MQSB=0.388102;RPB=0.787708;SGB=51.6384;VDB=0.842072;EFF=INTRON(MODIFIER||||397|LOC_Os02g26014|protein_coding|CODING|LOC_Os02g26014.1|4|1) FN1300-S.SNP.2:15285233 chr02:015285233 0 W/15285233-15285233 FN1300-S Single Base Substitution G-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1300-S.SNP.2:15285234 chr02:015285234 0 W/15285234-15285234 FN1300-S Single Base Substitution G-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2245-S.SNP.2:15285322 chr02:015285322 0 W/15285322-15285322 FN2245-S SNP G -> A AC=1;AN=190;BQB=0.169814;DP=4631;DP4=2277,2142,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1058e-05;MQSB=0.353619;RPB=0.721106;SGB=28.9929;VDB=0.398331;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.2:15286579 chr02:015286579 0 W/15286579-15286579 FN750-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN_798-4-2.SNP.2:15297164 chr02:015297164 0 W/15297164-15297164 FN_798-4-2 Single Base Substitution C-T HET LOC_Os02g26060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN748-S.SNP.2:15300758 chr02:015300758 0 W/15300758-15300758 FN748-S Single Base Substitution T-C INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN748-S.SNP.2:15300759 chr02:015300759 0 W/15300759-15300759 FN748-S Single Base Substitution G-A INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3444-S.SNP.2:15300914 chr02:015300914 0 W/15300914-15300914 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.807286;DP=2540;DP4=1344,1136,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.32855e-07;MQSB=0.992833;RPB=0.990749;SGB=48.7425;VDB=0.983426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G132D|1255|LOC_Os02g26060|protein_coding|CODING|LOC_Os02g26060.1|1|1) W252-6-1.SNP.2:15301592 chr02:015301592 0 W/15301592-15301592 W252-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2249-S.SNP.2:15302733 chr02:015302733 0 W/15302733-15302733 FN2249-S SNP C -> G AC=1;AN=190;BQB=0.0141482;DP=5090;DP4=2163,2604,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.93255e-06;MQSB=0.995829;RPB=0.987988;SGB=-60.3192;VDB=0.628719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.2:15304650 chr02:015304650 0 W/15304650-15304650 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.407757;DP=4786;DP4=2200,2281,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91954e-12;MQSB=0.840406;RPB=0.698043;SGB=51.7524;VDB=0.58531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G369S|498|LOC_Os02g26070|protein_coding|CODING|LOC_Os02g26070.1|6|1) FN2387.SNP.2:15305281 chr02:015305281 0 W/15305281-15305281 FN2387 SNP G -> A AC=1;AN=192;BQB=0.0917779;DP=4641;DP4=1985,2426,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.02948e-09;MQSB=0.745782;RPB=0.97079;SGB=28.9139;VDB=0.362378;EFF=INTRON(MODIFIER||||498|LOC_Os02g26070|protein_coding|CODING|LOC_Os02g26070.1|4|1) FN2792-S.SNP.2:15310379 chr02:015310379 0 W/15310379-15310379 FN2792-S SNP G -> C AC=1;AN=198;BQB=0.984406;DP=3431;DP4=1689,1436,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.52652e-09;MQSB=0.940146;RPB=0.880493;SGB=26.7492;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.2:15310389 chr02:015310389 0 W/15310389-15310389 FN2792-S SNP G -> A AC=1;AN=198;BQB=0.71868;DP=3405;DP4=1646,1509,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.37387e-09;MQSB=0.921568;RPB=0.999196;SGB=40.149;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.2:15313220 chr02:015313220 0 W/15313220-15313220 FN1320-S Single Base Substitution A-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN748-S.SNP.2:15315838 chr02:015315838 0 W/15315838-15315838 FN748-S Single Base Substitution A-G INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN898-S.SNP.2:15330398 chr02:015330398 0 W/15330398-15330398 FN898-S Single Base Substitution C-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2129-S.SNP.2:15335012 chr02:015335012 0 W/15335012-15335012 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.97807;DP=1741;DP4=839,826,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0649052;MQB=0.498953;MQSB=1.9561e-05;RPB=0.974156;SGB=31.3172;VDB=0.637461;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A353|951|LOC_Os02g26100|protein_coding|CODING|LOC_Os02g26100.1|3|1) FN_827-1.SNP.2:15335063 chr02:015335063 0 W/15335063-15335063 FN_827-1 Single Base Substitution C-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. W472-5-1.SNP.2:15335829 chr02:015335829 0 W/15335829-15335829 W472-5-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g26100 retrotransposon protein, putative, unclassified, expressed SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3819-S.SNP.2:15336674 chr02:015336674 0 W/15336674-15336674 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.996813;DP=2689;DP4=1496,1124,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00743771;MQB=0.0156498;MQSB=1.49981e-09;RPB=0.897524;SGB=39.9877;VDB=0.891275;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A907|951|LOC_Os02g26100|protein_coding|CODING|LOC_Os02g26100.1|3|1) FN4201-S.SNP.2:15337776 chr02:015337776 0 W/15337776-15337776 FN4201-S SNP G -> A AC=2;AN=170;BQB=0.60748;DP=2784;DP4=1570,1151,11,11;HOB=0.0232526;ICB=0.494188;MQ=37;MQ0F=0.0431034;MQB=0.983227;MQSB=1.67301e-07;RPB=0.656219;SGB=92.2986;VDB=0.317431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1860W|1882|LOC_Os02g26110|protein_coding|CODING|LOC_Os02g26110.1|5|1) FN1622-S.SNP.2:15343009 chr02:015343009 0 W/15343009-15343009 FN1622-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g26110 retrotransposon protein, putative, unclassified, expressed SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN3412-S.SNP.2:15343378 chr02:015343378 0 W/15343378-15343378 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.780369;DP=3647;DP4=1681,1875,13,15;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0161777;MQB=0.39784;MQSB=0.269455;RPB=0.0852968;SGB=121.091;VDB=0.413774;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P98S|1882|LOC_Os02g26110|protein_coding|CODING|LOC_Os02g26110.1|1|1) FN1633-S.SNP.2:15354544 chr02:015354544 0 W/15354544-15354544 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2730-S.SNP.2:15356562 chr02:015356562 0 W/15356562-15356562 FN2730-S SNP T -> A AC=2;AN=200;BQB=0.999771;DP=4586;DP4=2319,2056,13,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.01933e-17;MQSB=0.920286;RPB=0.984418;SGB=127.947;VDB=0.845304;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.2:15356884 chr02:015356884 0 W/15356884-15356884 FN411-S Single Base Substitution T-C INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1097-S.SNP.2:15359872 chr02:015359872 0 W/15359872-15359872 FN1097-S Single Base Substitution G-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN4094-S.SNP.2:15360595 chr02:015360595 0 W/15360595-15360595 FN4094-S SNP A -> T AC=2;AN=182;BQB=0.985129;DP=3496;DP4=1832,1551,22,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.02486e-18;MQSB=0.980733;RPB=0.854398;SGB=105.845;VDB=0.189728;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.2:15364854 chr02:015364854 0 W/15364854-15364854 FN-400 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g26160 receptor lectin kinase like protein, putative, expressed SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN3828-S.SNP.2:15368965 chr02:015368965 0 W/15368965-15368965 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.682838;DP=2121;DP4=1257,787,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.60488e-05;MQSB=0.487796;RPB=0.902039;SGB=18.3316;VDB=0.884777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.2:15373081 chr02:015373081 0 W/15373081-15373081 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.15645;DP=4634;DP4=2171,2186,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000215796;MQB=2.14037e-07;MQSB=0.992653;RPB=0.231817;SGB=45.0543;VDB=0.346801;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.2:15375464 chr02:015375464 0 W/15375464-15375464 FN3787-S SNP C -> T AC=2;AN=190;BQB=0.828001;DP=2809;DP4=1386,1285,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.66231e-22;MQSB=0.789709;RPB=0.661742;SGB=158.388;VDB=0.237626;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R241*|2192|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.1|2|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R241*|2010|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.2|2|1);LOF=(LOC_Os02g26190|LOC_Os02g26190|2|1.00);NMD=(LOC_Os02g26190|LOC_Os02g26190|2|1.00) FN2118-S.SNP.2:15380083 chr02:015380083 0 W/15380083-15380083 FN2118-S SNP C -> T AC=1;AN=168;BQB=6.55536e-07;DP=2667;DP4=349,2270,5,20;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000374953;MQB=0.00018893;MQSB=0.0390256;RPB=0.807601;SGB=17.068;VDB=0.380831;EFF=INTRON(MODIFIER||||2192|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.1|7|1),INTRON(MODIFIER||||2010|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.2|7|1) FN3909-S.SNP.2:15381065 chr02:015381065 0 W/15381065-15381065 FN3909-S SNP A -> G AC=1;AN=158;BQB=0.934409;DP=2507;DP4=1348,1052,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.32013e-09;MQSB=0.948464;RPB=0.878356;SGB=73.2838;VDB=0.110461;EFF=INTRON(MODIFIER||||2192|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.1|7|1),INTRON(MODIFIER||||2010|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.2|7|1) FN2588-S.SNP.2:15381440 chr02:015381440 0 W/15381440-15381440 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.749704;DP=4148;DP4=1987,1868,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.40827e-10;MQSB=0.579842;RPB=0.903916;SGB=34.5346;VDB=0.336651;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V926|2192|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V926|2010|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.2|8|1) FN3833-S.SNP.2:15385425 chr02:015385425 0 W/15385425-15385425 FN3833-S SNP T -> C AC=1;AN=190;BQB=0.902511;DP=3369;DP4=1744,1548,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.25468e-08;MQSB=0.967999;RPB=0.60892;SGB=49.0954;VDB=0.378827;EFF=INTRON(MODIFIER||||2192|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.1|18|1),INTRON(MODIFIER||||2010|LOC_Os02g26190|protein_coding|CODING|LOC_Os02g26190.2|18|1) FN1195-S.SNP.2:15391046 chr02:015391046 0 W/15391046-15391046 FN1195-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN-80.SNP.2:15393649 chr02:015393649 0 W/15393649-15393649 FN-80 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g26200 expressed protein SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN-80.SNP.2:15393650 chr02:015393650 0 W/15393650-15393650 FN-80 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g26200 expressed protein SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN979-S.SNP.2:15395465 chr02:015395465 0 W/15395465-15395465 FN979-S Single Base Substitution T-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2579-S.SNP.2:15399511 chr02:015399511 0 W/15399511-15399511 FN2579-S SNP C -> T AC=1;AN=198;BQB=0.62577;DP=4359;DP4=1883,2264,18,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35576e-22;MQSB=0.542366;RPB=0.746381;SGB=-129.108;VDB=0.811938;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.2:15403476 chr02:015403476 0 W/15403476-15403476 FN621-S Single Base Substitution A-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN1230-S.SNP.2:15407073 chr02:015407073 0 W/15407073-15407073 FN1230-S Single Base Substitution G-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1762-S.SNP.2:15409724 chr02:015409724 0 W/15409724-15409724 FN1762-S SNP T -> G AC=1;AN=188;BQB=0.849512;DP=2265;DP4=1136,1107,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.16704e-05;MQSB=0.990091;RPB=0.263091;SGB=18.4463;VDB=0.450347;EFF=INTRON(MODIFIER||||483|LOC_Os02g26230|protein_coding|CODING|LOC_Os02g26230.1|4|1) FN772-S.SNP.2:15412163 chr02:015412163 0 W/15412163-15412163 FN772-S Single Base Substitution G-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2797-S.SNP.2:15418111 chr02:015418111 0 W/15418111-15418111 FN2797-S SNP A -> G AC=2;AN=198;BQB=0.205243;DP=4195;DP4=1899,1717,20,22;HOB=0.019998;ICB=0.495001;MQ=33;MQ0F=0.0586412;MQB=0.342116;MQSB=0.84862;RPB=0.982316;SGB=94.2223;VDB=0.698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.2:15418980 chr02:015418980 0 W/15418980-15418980 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.924479;DP=2942;DP4=2110,493,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000339905;MQB=3.17129e-07;MQSB=4.5394e-14;RPB=0.895934;SGB=53.3568;VDB=0.123095;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.2:15422972 chr02:015422972 0 W/15422972-15422972 FN1642-S Single Base Substitution G-C INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1315-S.SNP.2:15424698 chr02:015424698 0 W/15424698-15424698 FN1315-S Single Base Substitution G-T INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. W607-2-1.SNP.2:15425851 chr02:015425851 0 W/15425851-15425851 W607-2-1 Single Base Substitution G-A STOP_GAINED HET LOC_Os02g26270 retrotransposon protein, putative, unclassified, expressed SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3627-S.SNP.2:15427850 chr02:015427850 0 W/15427850-15427850 FN3627-S SNP T -> C AC=1;AN=190;BQB=0.831527;DP=2839;DP4=1188,1558,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55157e-06;MQSB=0.996858;RPB=0.9639;SGB=44.5415;VDB=0.778936;EFF=INTRON(MODIFIER||||450|LOC_Os02g26270|protein_coding|CODING|LOC_Os02g26270.1|1|1) FN1669-S.SNP.2:15428227 chr02:015428227 0 W/15428227-15428227 FN1669-S SNP C -> T AC=1;AN=188;BQB=0.120712;DP=2085;DP4=1080,980,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000479616;MQB=0.000188187;MQSB=0.296653;RPB=0.632273;SGB=-14.4565;VDB=0.892681;EFF=INTRON(MODIFIER||||450|LOC_Os02g26270|protein_coding|CODING|LOC_Os02g26270.1|1|1) FN576-S.SNP.2:15430986 chr02:015430986 0 W/15430986-15430986 FN576-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g26280 retrotransposon protein, putative, unclassified, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3840-S.SNP.2:15434197 chr02:015434197 0 W/15434197-15434197 FN3840-S SNP C -> A AC=1;AN=190;BQB=0.682334;DP=2529;DP4=1282,1155,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02105e-05;MQSB=0.999899;RPB=0.245944;SGB=25.439;VDB=0.424494;EFF=INTRON(MODIFIER||||436|LOC_Os02g26280|protein_coding|CODING|LOC_Os02g26280.1|7|1) FN3849-S.SNP.2:15434564 chr02:015434564 0 W/15434564-15434564 FN3849-S SNP T -> A AC=1;AN=158;BQB=0.996251;DP=2250;DP4=1133,1027,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.30563e-07;MQSB=0.998569;RPB=0.965859;SGB=34.0735;VDB=0.958132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F350L|436|LOC_Os02g26280|protein_coding|CODING|LOC_Os02g26280.1|8|1) FN3849-S.SNP.2:15434576 chr02:015434576 0 W/15434576-15434576 FN3849-S SNP G -> T AC=1;AN=158;BQB=0.951516;DP=2217;DP4=1087,1038,11,1;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.39894e-08;MQSB=0.987971;RPB=0.627292;SGB=47.0672;VDB=0.974716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K354N|436|LOC_Os02g26280|protein_coding|CODING|LOC_Os02g26280.1|8|1) FN-338.SNP.2:15435651 chr02:015435651 0 W/15435651-15435651 FN-338 Single Base Substitution T-A INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-338.SNP.2:15435652 chr02:015435652 0 W/15435652-15435652 FN-338 Single Base Substitution T-A INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2734-S.SNP.2:15438177 chr02:015438177 0 W/15438177-15438177 FN2734-S SNP T -> C AC=2;AN=200;BQB=0.871794;DP=4984;DP4=2287,2434,26,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03348e-33;MQSB=0.993834;RPB=0.501183;SGB=70.4864;VDB=0.118239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.2:15438294 chr02:015438294 0 W/15438294-15438294 FN3555-S SNP A -> C AC=2;AN=188;BQB=0.987777;DP=2832;DP4=1201,1501,17,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.46741e-20;MQSB=0.998002;RPB=0.776226;SGB=167.105;VDB=0.87693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.2:15440402 chr02:015440402 0 W/15440402-15440402 FN1382-S Single Base Substitution C-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3294-S.SNP.2:15450591 chr02:015450591 0 W/15450591-15450591 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.981071;DP=3156;DP4=1298,1719,6,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.78083e-13;MQSB=0.790562;RPB=0.955933;SGB=107.526;VDB=0.184173;EFF=INTRON(MODIFIER||||592|LOC_Os02g26300|protein_coding|CODING|LOC_Os02g26300.1|3|1) FN4150-S.SNP.2:15450838 chr02:015450838 0 W/15450838-15450838 FN4150-S SNP T -> C AC=2;AN=170;BQB=0.988648;DP=2405;DP4=1092,1172,20,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.4408e-21;MQSB=0.994686;RPB=0.345755;SGB=120.944;VDB=0.827083;EFF=INTRON(MODIFIER||||592|LOC_Os02g26300|protein_coding|CODING|LOC_Os02g26300.1|3|1) FN-135.SNP.2:15457883 chr02:015457883 0 W/15457883-15457883 FN-135 Single Base Substitution C-T INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN430-S.SNP.2:15458359 chr02:015458359 0 W/15458359-15458359 FN430-S Single Base Substitution T-C INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1520-S.SNP.2:15458467 chr02:015458467 0 W/15458467-15458467 FN1520-S Single Base Substitution A-G INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1122-S.SNP.2:15459194 chr02:015459194 0 W/15459194-15459194 FN1122-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. W247-2-1.SNP.2:15474068 chr02:015474068 0 W/15474068-15474068 W247-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1730-S.SNP.2:15475334 chr02:015475334 0 W/15475334-15475334 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.579567;DP=2014;DP4=1241,731,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.5074e-07;MQSB=0.900633;RPB=0.699728;SGB=39.8925;VDB=0.81712;EFF=INTRON(MODIFIER||||199|LOC_Os02g26349|protein_coding|CODING|LOC_Os02g26349.1|1|1),INTRON(MODIFIER||||199|LOC_Os02g26349|protein_coding|CODING|LOC_Os02g26349.2|1|1) FN-228.SNP.2:15475597 chr02:015475597 0 W/15475597-15475597 FN-228 Single Base Substitution G-T INTRON HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN3668-S.SNP.2:15477679 chr02:015477679 0 W/15477679-15477679 FN3668-S SNP A -> G AC=2;AN=190;BQB=0.986489;DP=2910;DP4=1442,1294,11,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.9358e-18;MQSB=0.716293;RPB=0.769716;SGB=69.6295;VDB=0.0742868;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.2:15479254 chr02:015479254 0 W/15479254-15479254 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1233-S.SNP.2:15486459 chr02:015486459 0 W/15486459-15486459 FN1233-S Single Base Substitution C-A INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN496-S.SNP.2:15486459 chr02:015486459 0 W/15486459-15486459 FN496-S Single Base Substitution C-A INTERGENIC HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3463-S.SNP.2:15486730 chr02:015486730 0 W/15486730-15486730 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.847526;DP=2853;DP4=1305,1484,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66926e-06;MQSB=0.982888;RPB=0.776475;SGB=48.7425;VDB=0.668543;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.2:15495876 chr02:015495876 0 W/15495876-15495876 FN768-S Single Base Substitution C-T INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN-69.SNP.2:15495894 chr02:015495894 0 W/15495894-15495894 FN-69 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2581-S.SNP.2:15496688 chr02:015496688 0 W/15496688-15496688 FN2581-S SNP A -> G AC=1;AN=198;BQB=0.1157;DP=4146;DP4=1877,1917,13,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.71202e-11;MQSB=0.764875;RPB=0.99819;SGB=50.9344;VDB=0.202811;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M407T|436|LOC_Os02g26390|protein_coding|CODING|LOC_Os02g26390.1|2|1) FN-375.SNP.2:15509351 chr02:015509351 0 W/15509351-15509351 FN-375 Single Base Substitution T-C INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3610-S.SNP.2:15519309 chr02:015519309 0 W/15519309-15519309 FN3610-S SNP A -> T AC=1;AN=190;BQB=0.644695;DP=2904;DP4=1313,1442,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000344353;MQB=2.39324e-05;MQSB=0.463071;RPB=0.686216;SGB=15.9981;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.2:15521605 chr02:015521605 0 W/15521605-15521605 FN1263-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g26430 WRKY42, expressed SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2375.SNP.2:15533377 chr02:015533377 0 W/15533377-15533377 FN2375 SNP C -> T AC=2;AN=192;BQB=0.269657;DP=4951;DP4=2465,2147,13,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.69996e-19;MQSB=0.985439;RPB=0.643169;SGB=145.062;VDB=0.89544;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G128R|206|LOC_Os02g26460|protein_coding|CODING|LOC_Os02g26460.1|2|1) FN_770-6-1.SNP.2:15538354 chr02:015538354 0 W/15538354-15538354 FN_770-6-1 Single Base Substitution C-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN-215.SNP.2:15538865 chr02:015538865 0 W/15538865-15538865 FN-215 Single Base Substitution C-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN2237-S.SNP.2:15539422 chr02:015539422 0 W/15539422-15539422 FN2237-S SNP C -> T AC=2;AN=190;BQB=0.965481;DP=3505;DP4=1513,1583,15,8;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.000285307;MQB=4.31111e-08;MQSB=0.999993;RPB=0.130134;SGB=44.0907;VDB=0.719545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.2:15543275 chr02:015543275 0 W/15543275-15543275 FN3391-S SNP T -> G AC=1;AN=184;BQB=0.788583;DP=2525;DP4=1380,998,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00512e-12;MQSB=0.899586;RPB=0.262214;SGB=80.3949;VDB=0.0391051;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.2:15548522 chr02:015548522 0 W/15548522-15548522 FN_N1-151-7 Single Base Substitution C-T HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2626-S.SNP.2:15552863 chr02:015552863 0 W/15552863-15552863 FN2626-S SNP G -> C AC=1;AN=200;BQB=0.996961;DP=4856;DP4=2340,2295,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68683e-06;MQSB=0.97821;RPB=0.652606;SGB=35.8441;VDB=0.300288;EFF=INTRON(MODIFIER||||331|LOC_Os02g26480|protein_coding|CODING|LOC_Os02g26480.1|9|1),INTRON(MODIFIER||||503|LOC_Os02g26480|protein_coding|CODING|LOC_Os02g26480.2|9|1) FN576-S.SNP.2:15553281 chr02:015553281 0 W/15553281-15553281 FN576-S Single Base Substitution C-T INTRON HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN576-S.SNP.2:15553290 chr02:015553290 0 W/15553290-15553290 FN576-S Single Base Substitution A-G INTRON HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1233-S.SNP.2:15573935 chr02:015573935 0 W/15573935-15573935 FN1233-S Single Base Substitution C-G INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN4230-S.SNP.2:15582487 chr02:015582487 0 W/15582487-15582487 FN4230-S SNP A -> G AC=1;AN=170;BQB=0.499711;DP=2989;DP4=1374,1531,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.09924e-06;MQSB=0.973881;RPB=0.625968;SGB=38.3207;VDB=0.0836807;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.2:15584349 chr02:015584349 0 W/15584349-15584349 FN2594-S SNP A -> T AC=1;AN=198;BQB=0.00867442;DP=4889;DP4=1932,2716,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.45674;MQB=0.107453;MQSB=0;RPB=0.976266;SGB=-35.021;VDB=0.926411;EFF=INTRON(MODIFIER||||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.1|1|1),INTRON(MODIFIER||||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.2|1|1),INTRON(MODIFIER||||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.3|1|1) FN768-S.SNP.2:15585363 chr02:015585363 0 W/15585363-15585363 FN768-S Single Base Substitution G-A INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN3369-S.SNP.2:15586330 chr02:015586330 0 W/15586330-15586330 FN3369-S SNP G -> A AC=1;AN=184;BQB=0.969004;DP=2937;DP4=1430,1400,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43872e-08;MQSB=0.946853;RPB=0.994469;SGB=53.2642;VDB=0.573465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V291I|402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V291I|402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V291I|402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.3|2|1) FN859-S.SNP.2:15586511 chr02:015586511 0 W/15586511-15586511 FN859-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g26550 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3398-S.SNP.2:15586692 chr02:015586692 0 W/15586692-15586692 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.777726;DP=2534;DP4=1178,1273,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.68299e-07;MQSB=0.992078;RPB=0.0823556;SGB=15.7097;VDB=0.39819;EFF=UTR_3_PRIME(MODIFIER||24||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.1|2|1),UTR_3_PRIME(MODIFIER||24||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.2|2|1),UTR_3_PRIME(MODIFIER||24||402|LOC_Os02g26550|protein_coding|CODING|LOC_Os02g26550.3|2|1) FN-200.SNP.2:15587847 chr02:015587847 0 W/15587847-15587847 FN-200 Single Base Substitution T-C UTR_3_PRIME HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-258.SNP.2:15590579 chr02:015590579 0 W/15590579-15590579 FN-258 Single Base Substitution G-A INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2263-S.SNP.2:15610371 chr02:015610371 0 W/15610371-15610371 FN2263-S SNP G -> A AC=1;AN=190;BQB=0.689726;DP=5175;DP4=2359,2459,22,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.83763e-18;MQSB=0.988054;RPB=0.713273;SGB=72.1834;VDB=0.977592;EFF=INTRON(MODIFIER||||372|LOC_Os02g26570|protein_coding|CODING|LOC_Os02g26570.1|2|1) FN1255-S.SNP.2:15614316 chr02:015614316 0 W/15614316-15614316 FN1255-S Single Base Substitution A-G INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN-122.SNP.2:15624151 chr02:015624151 0 W/15624151-15624151 FN-122 Single Base Substitution G-T INTRON HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3846-S.SNP.2:15626663 chr02:015626663 0 W/15626663-15626663 FN3846-S SNP A -> T AC=1;AN=190;BQB=0.950865;DP=2590;DP4=1197,1296,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51494e-07;MQSB=0.988246;RPB=0.813559;SGB=28.9929;VDB=0.469204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q500L|998|LOC_Os02g26614|protein_coding|CODING|LOC_Os02g26614.1|6|1) FN-375.SNP.2:15637032 chr02:015637032 0 W/15637032-15637032 FN-375 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os02g26630 transposon protein, putative, unclassified, expressed SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2211-S.SNP.2:15641474 chr02:015641474 0 W/15641474-15641474 FN2211-S SNP C -> T AC=1;AN=190;BQB=0.987208;DP=5084;DP4=2395,2322,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.19771e-12;MQSB=0.876368;RPB=0.521753;SGB=78.7471;VDB=0.171727;EFF=UTR_3_PRIME(MODIFIER||1212||388|LOC_Os02g26650|protein_coding|CODING|LOC_Os02g26650.3|12|1) FN3700-S.SNP.2:15643256 chr02:015643256 0 W/15643256-15643256 FN3700-S SNP T -> C AC=1;AN=190;BQB=0.27746;DP=2758;DP4=1273,1355,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96461e-10;MQSB=0.81104;RPB=0.352334;SGB=108.296;VDB=0.228031;EFF=INTRON(MODIFIER||||388|LOC_Os02g26650|protein_coding|CODING|LOC_Os02g26650.3|7|1) FN3426-S.SNP.2:15648141 chr02:015648141 0 W/15648141-15648141 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.99541;DP=2520;DP4=1245,1192,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.20428e-12;MQSB=0.9471;RPB=0.716953;SGB=93.9603;VDB=0.599871;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.2:15649737 chr02:015649737 0 W/15649737-15649737 FN-363 Single Base Substitution A-C INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-183.SNP.2:15652405 chr02:015652405 0 W/15652405-15652405 FN-183 Single Base Substitution G-A INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN588-S.SNP.2:15663755 chr02:015663755 0 W/15663755-15663755 FN588-S Single Base Substitution T-G INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN788-S.SNP.2:15676946 chr02:015676946 0 W/15676946-15676946 FN788-S Single Base Substitution G-A INTRON HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN4128-S.SNP.2:15683212 chr02:015683212 0 W/15683212-15683212 FN4128-S SNP G -> T AC=1;AN=182;BQB=0.977287;DP=2923;DP4=1546,1320,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.29803e-07;MQSB=0.937638;RPB=0.597364;SGB=35.6277;VDB=0.228208;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.2:15684585 chr02:015684585 0 W/15684585-15684585 FN831-S Single Base Substitution T-C INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN526-S.SNP.2:15685897 chr02:015685897 0 W/15685897-15685897 FN526-S Single Base Substitution A-T INTERGENIC HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN526-S.SNP.2:15685898 chr02:015685898 0 W/15685898-15685898 FN526-S Single Base Substitution C-T INTERGENIC HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN430-S.SNP.2:15700760 chr02:015700760 0 W/15700760-15700760 FN430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. CW-631-3-1.SNP.2:15706974 chr02:015706974 0 W/15706974-15706974 CW-631-3-1 Single Base Substitution G-A INTRON HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. CW-631-3-1.SNP.2:15706975 chr02:015706975 0 W/15706975-15706975 CW-631-3-1 Single Base Substitution G-T INTRON HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN963-S.SNP.2:15720017 chr02:015720017 0 W/15720017-15720017 FN963-S Single Base Substitution G-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. W466-5-1.SNP.2:15728665 chr02:015728665 0 W/15728665-15728665 W466-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1372-S.SNP.2:15732228 chr02:015732228 0 W/15732228-15732228 FN1372-S Single Base Substitution A-T INTRON HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN4150-S.SNP.2:15741258 chr02:015741258 0 W/15741258-15741258 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.938727;DP=2452;DP4=1133,1246,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.09142e-11;MQSB=0.876483;RPB=0.516003;SGB=55.5339;VDB=0.36825;EFF=INTRON(MODIFIER||||62|LOC_Os02g26814|protein_coding|CODING|LOC_Os02g26814.4|2|1),INTRON(MODIFIER||||62|LOC_Os02g26814|protein_coding|CODING|LOC_Os02g26814.2|2|1),INTRON(MODIFIER||||62|LOC_Os02g26814|protein_coding|CODING|LOC_Os02g26814.3|2|1),INTRON(MODIFIER||||172|LOC_Os02g26814|protein_coding|CODING|LOC_Os02g26814.1|2|1) FN1682-S.SNP.2:15745078 chr02:015745078 0 W/15745078-15745078 FN1682-S SNP T -> A AC=1;AN=188;BQB=0.0823356;DP=3244;DP4=1923,1299,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.03861e-05;MQSB=0.766359;RPB=0.884163;SGB=-35.5377;VDB=0.782052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.2:15747419 chr02:015747419 0 W/15747419-15747419 FN2295 SNP C -> T AC=1;AN=192;BQB=0.95607;DP=4575;DP4=2224,2048,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.01909e-13;MQSB=0.667593;RPB=0.275687;SGB=41.7357;VDB=0.376378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.2:15748543 chr02:015748543 0 W/15748543-15748543 FN3700-S SNP T -> C AC=1;AN=190;BQB=0.759171;DP=2902;DP4=1575,1206,17,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00034459;MQB=3.27285e-09;MQSB=0.33936;RPB=0.0725009;SGB=10.3266;VDB=0.371889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-79.SNP.2:15749306 chr02:015749306 0 W/15749306-15749306 FN-79 Single Base Substitution T-G INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN2083-S.SNP.2:15751948 chr02:015751948 0 W/15751948-15751948 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.00589351;DP=3892;DP4=1952,1653,121,133;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0174717;MQB=0;MQSB=0.907817;RPB=0.00184896;SGB=-2586.8;VDB=0.000846135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.2:15751961 chr02:015751961 0 W/15751961-15751961 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.228633;DP=3948;DP4=1992,1634,127,173;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0202634;MQB=0;MQSB=0.158658;RPB=0.510507;SGB=-2585.64;VDB=0.455898;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.2:15753441 chr02:015753441 0 W/15753441-15753441 FN4129-S SNP C -> T AC=1;AN=182;BQB=0.865187;DP=2874;DP4=1335,1478,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000695894;MQB=1.25469e-08;MQSB=0.882982;RPB=0.291047;SGB=57.644;VDB=0.860871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.2:15764522 chr02:015764522 0 W/15764522-15764522 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.950634;DP=3164;DP4=1151,1958,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.81321e-06;MQSB=0.927581;RPB=0.229954;SGB=28.8977;VDB=0.115116;EFF=INTRON(MODIFIER||||277|LOC_Os02g26850|protein_coding|CODING|LOC_Os02g26850.1|2|1) FN3381-S.SNP.2:15774852 chr02:015774852 0 W/15774852-15774852 FN3381-S SNP A -> G AC=2;AN=184;BQB=0.942834;DP=2825;DP4=1298,1412,16,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.84033e-18;MQSB=0.98188;RPB=0.858148;SGB=157.265;VDB=0.494829;EFF=UTR_3_PRIME(MODIFIER||53||435|LOC_Os02g26860|protein_coding|CODING|LOC_Os02g26860.1|6|1) FN1073-S.SNP.2:15781115 chr02:015781115 0 W/15781115-15781115 FN1073-S Single Base Substitution C-T INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN1358-S.SNP.2:15794830 chr02:015794830 0 W/15794830-15794830 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN-187.SNP.2:15797379 chr02:015797379 0 W/15797379-15797379 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-348.SNP.2:15798582 chr02:015798582 0 W/15798582-15798582 FN-348 Single Base Substitution A-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-348.SNP.2:15798583 chr02:015798583 0 W/15798583-15798583 FN-348 Single Base Substitution C-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN2715-S.SNP.2:15799469 chr02:015799469 0 W/15799469-15799469 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.965404;DP=3663;DP4=1716,1715,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.13967e-07;MQSB=0.180543;RPB=0.498102;SGB=72.6852;VDB=0.148175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.2:15800349 chr02:015800349 0 W/15800349-15800349 FN1058-S Single Base Substitution C-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3811-S.SNP.2:15800739 chr02:015800739 0 W/15800739-15800739 FN3811-S SNP G -> C AC=1;AN=190;BQB=0.987383;DP=3181;DP4=1758,1302,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.25256e-08;MQSB=0.944226;RPB=0.64497;SGB=58.2031;VDB=0.898372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.2:15806041 chr02:015806041 0 W/15806041-15806041 FN3598-S SNP C -> A AC=1;AN=188;BQB=0.849868;DP=1461;DP4=1086,324,6,1;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.446201;MQSB=0.0110178;RPB=0.26203;SGB=26.2637;VDB=0.0646747;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.2:15811534 chr02:015811534 0 W/15811534-15811534 FN4103-S SNP C -> T AC=2;AN=182;BQB=0.329026;DP=2507;DP4=1304,1152,8,6;HOB=0.0217365;ICB=0.494567;MQ=37;MQ0F=0.0466693;MQB=0.945954;MQSB=2.61581e-10;RPB=0.108807;SGB=57.644;VDB=0.44694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R204W|1872|LOC_Os02g26920|protein_coding|CODING|LOC_Os02g26920.1|1|1) FN890-S.SNP.2:15814672 chr02:015814672 0 W/15814672-15814672 FN890-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g26920 retrotransposon protein, putative, unclassified, expressed SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2290.SNP.2:15816257 chr02:015816257 0 W/15816257-15816257 FN2290 SNP C -> T AC=2;AN=192;BQB=0.474261;DP=4972;DP4=2265,2438,23,27;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.0353982;MQB=0.0694093;MQSB=0.950445;RPB=0.911687;SGB=168.097;VDB=0.793744;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L1663|1872|LOC_Os02g26920|protein_coding|CODING|LOC_Os02g26920.1|3|1) FN4206-S.SNP.2:15816257 chr02:015816257 0 W/15816257-15816257 FN4206-S SNP C -> T AC=2;AN=170;BQB=0.999936;DP=2497;DP4=1127,1295,9,10;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.0837004;MQB=0.213471;MQSB=0.00500059;RPB=0.999348;SGB=55.5339;VDB=0.656285;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L1663|1872|LOC_Os02g26920|protein_coding|CODING|LOC_Os02g26920.1|3|1) FN2681-S.SNP.2:15819925 chr02:015819925 0 W/15819925-15819925 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.691931;DP=4268;DP4=1914,2080,9,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=6.61845e-09;MQSB=0.269588;RPB=0.99551;SGB=69.1109;VDB=0.394612;EFF=INTRON(MODIFIER||||705|LOC_Os02g26930|protein_coding|CODING|LOC_Os02g26930.1|1|1) FN1453-S.SNP.2:15820171 chr02:015820171 0 W/15820171-15820171 FN1453-S Single Base Substitution G-A INTRON HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. W706-3-1.SNP.2:15825600 chr02:015825600 0 W/15825600-15825600 W706-3-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g26940 vegetative storage protein, putative, expressed SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2542-S.SNP.2:15831648 chr02:015831648 0 W/15831648-15831648 FN2542-S SNP C -> G AC=1;AN=198;BQB=0.984192;DP=4329;DP4=2144,2013,11,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.69384e-07;MQSB=0.952453;RPB=0.971795;SGB=40.149;VDB=0.681875;EFF=INTRON(MODIFIER||||251|LOC_Os02g26960|protein_coding|CODING|LOC_Os02g26960.1|1|1) FN1675-S.SNP.2:15857991 chr02:015857991 0 W/15857991-15857991 FN1675-S SNP G -> T AC=2;AN=188;BQB=0.00719656;DP=3729;DP4=1713,1958,28,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.16563e-18;MQSB=0.990504;RPB=0.7158;SGB=-447.745;VDB=0.25037;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.2:15861152 chr02:015861152 0 W/15861152-15861152 FN1721-S SNP C -> T AC=1;AN=188;BQB=0.462268;DP=3376;DP4=1920,1433,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.034064;MQB=0.933068;MQSB=0.682982;RPB=0.937849;SGB=50.1574;VDB=0.0697498;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.2:15873706 chr02:015873706 0 W/15873706-15873706 FN-203 Single Base Substitution A-G INTRON HOMO SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN1493-S.SNP.2:15875115 chr02:015875115 0 W/15875115-15875115 FN1493-S Single Base Substitution A-T INTRON HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN-335.SNP.2:15878069 chr02:015878069 0 W/15878069-15878069 FN-335 Single Base Substitution A-G INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3518-S.SNP.2:15879566 chr02:015879566 0 W/15879566-15879566 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.986423;DP=3403;DP4=1368,1967,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.06259e-07;MQSB=0.99789;RPB=0.628664;SGB=48.979;VDB=0.0145736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.2:15884163 chr02:015884163 0 W/15884163-15884163 FN1215-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g27020 expressed protein SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2327.SNP.2:15886570 chr02:015886570 0 W/15886570-15886570 FN2327 SNP C -> T AC=2;AN=192;BQB=0.940471;DP=4997;DP4=2227,2339,19,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.49607e-18;MQSB=0.571752;RPB=0.495428;SGB=-3.48171;VDB=0.936777;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.2:15887979 chr02:015887979 0 W/15887979-15887979 FN1156-XA21 Single Base Substitution T-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2209-S.SNP.2:15895434 chr02:015895434 0 W/15895434-15895434 FN2209-S SNP A -> C AC=2;AN=190;BQB=0.997425;DP=5129;DP4=2240,2564,23,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.74997e-29;MQSB=0.987606;RPB=0.791587;SGB=8.37922;VDB=0.47374;EFF=INTERGENIC(MODIFIER||||||||||1) FN1459-S.SNP.2:15901371 chr02:015901371 0 W/15901371-15901371 FN1459-S Single Base Substitution C-T INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN988-S.SNP.2:15905236 chr02:015905236 0 W/15905236-15905236 FN988-S Single Base Substitution T-C INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2792-S.SNP.2:15906306 chr02:015906306 0 W/15906306-15906306 FN2792-S SNP G -> T AC=1;AN=198;BQB=0.994422;DP=3992;DP4=1878,1893,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.40703e-07;MQSB=0.939986;RPB=0.953983;SGB=13.7737;VDB=0.808624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.2:15906307 chr02:015906307 0 W/15906307-15906307 FN2792-S SNP A -> T AC=1;AN=198;BQB=0.76058;DP=3979;DP4=1880,1886,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.01543e-06;MQSB=0.841775;RPB=0.980996;SGB=-0.221308;VDB=0.881069;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.2:15915570 chr02:015915570 0 W/15915570-15915570 FN_N1-119-1 Single Base Substitution A-G Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3708-S.SNP.2:15920634 chr02:015920634 0 W/15920634-15920634 FN3708-S SNP G -> A AC=1;AN=190;BQB=0.73771;DP=3056;DP4=1574,1390,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07612e-05;MQSB=0.998607;RPB=0.94953;SGB=49.0954;VDB=0.657473;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||95|LOC_Os02g27080|protein_coding|CODING|LOC_Os02g27080.1|2|1),INTRON(MODIFIER||||95|LOC_Os02g27080|protein_coding|CODING|LOC_Os02g27080.1|1|1);LOF=(LOC_Os02g27080|LOC_Os02g27080|1|1.00) FN1686-S.SNP.2:15923141 chr02:015923141 0 W/15923141-15923141 FN1686-S SNP T -> A AC=1;AN=188;BQB=0.982894;DP=3314;DP4=1206,2072,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.73057e-12;MQSB=0.974295;RPB=0.999363;SGB=51.5091;VDB=0.98448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.2:15926629 chr02:015926629 0 W/15926629-15926629 FN3389-S SNP G -> C AC=1;AN=184;BQB=0.860681;DP=3362;DP4=1782,1433,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.24671e-08;MQSB=0.971353;RPB=0.894735;SGB=35.884;VDB=0.824688;EFF=INTRON(MODIFIER||||283|LOC_Os02g27100|protein_coding|CODING|LOC_Os02g27100.1|1|1) FN2107-S.SNP.2:15958332 chr02:015958332 0 W/15958332-15958332 FN2107-S SNP A -> T AC=1;AN=168;BQB=0.307649;DP=4029;DP4=1949,2044,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.81532e-11;MQSB=0.982866;RPB=0.84575;SGB=14.2064;VDB=0.493422;EFF=INTRON(MODIFIER||||1130|LOC_Os02g27130|protein_coding|CODING|LOC_Os02g27130.1|22|1) FN1392-S.SNP.2:15973056 chr02:015973056 0 W/15973056-15973056 FN1392-S Single Base Substitution A-G INTRON HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3591-S.SNP.2:15977241 chr02:015977241 0 W/15977241-15977241 FN3591-S SNP C -> A AC=1;AN=188;BQB=0.994469;DP=2888;DP4=1259,1564,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.05349e-09;MQSB=0.992839;RPB=0.349592;SGB=58.0655;VDB=0.752013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.2:15983276 chr02:015983276 0 W/15983276-15983276 FN3294-S SNP A -> G AC=1;AN=184;BQB=0.948892;DP=2850;DP4=1314,1409,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.18591e-12;MQSB=0.999998;RPB=0.553454;SGB=63.9222;VDB=0.139379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.2:15983920 chr02:015983920 0 W/15983920-15983920 FN-173 Single Base Substitution C-G INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2785-S.SNP.2:15990259 chr02:015990259 0 W/15990259-15990259 FN2785-S SNP T -> A AC=1;AN=198;BQB=0.743802;DP=3988;DP4=1868,1710,21,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.85894e-15;MQSB=0.749915;RPB=0.973533;SGB=97.671;VDB=0.700914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.2:15995611 chr02:015995611 0 W/15995611-15995611 FN1660-S Single Base Substitution C-T INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1153-S.SNP.2:15996228 chr02:015996228 0 W/15996228-15996228 FN1153-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g27180 retrotransposon, putative, centromere-specific, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN924-S.SNP.2:16000187 chr02:016000187 0 W/16000187-16000187 FN924-S Single Base Substitution T-C INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN526-S.SNP.2:16008461 chr02:016008461 0 W/16008461-16008461 FN526-S Single Base Substitution C-A INTRON HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1032-S.SNP.2:16009406 chr02:016009406 0 W/16009406-16009406 FN1032-S Single Base Substitution C-A INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2233-S.SNP.2:16009406 chr02:016009406 0 W/16009406-16009406 FN2233-S SNP C -> A AC=2;AN=190;BQB=0.959304;DP=5280;DP4=2274,2562,17,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.37115e-15;MQSB=0.741895;RPB=0.311526;SGB=41.4042;VDB=0.599972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.2:16013916 chr02:016013916 0 W/16013916-16013916 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.189655;DP=3214;DP4=1514,1456,8,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.96247e-12;MQSB=0.999229;RPB=0.866001;SGB=100.095;VDB=0.227253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A39S|518|LOC_Os02g27220|protein_coding|CODING|LOC_Os02g27220.1|1|1) FN621-S.SNP.2:16015660 chr02:016015660 0 W/16015660-16015660 FN621-S Single Base Substitution G-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3667-S.SNP.2:16017955 chr02:016017955 0 W/16017955-16017955 FN3667-S SNP G -> A AC=1;AN=190;BQB=0.844563;DP=3018;DP4=1475,1422,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19133e-08;MQSB=0.881139;RPB=0.844065;SGB=71.8647;VDB=0.42324;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.2:16019950 chr02:016019950 0 W/16019950-16019950 FN1445-S Single Base Substitution T-C INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1707-S.SNP.2:16022315 chr02:016022315 0 W/16022315-16022315 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.221362;DP=1485;DP4=742,703,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000345678;MQSB=0.0166437;RPB=0.834689;SGB=10.8165;VDB=0.327896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V243I|1886|LOC_Os02g27230|protein_coding|CODING|LOC_Os02g27230.1|1|1) FN1478-S.SNP.2:16025743 chr02:016025743 0 W/16025743-16025743 FN1478-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g27230 retrotransposon protein, putative, unclassified, expressed SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN768-S.SNP.2:16027541 chr02:016027541 0 W/16027541-16027541 FN768-S Single Base Substitution C-G INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN768-S.SNP.2:16027542 chr02:016027542 0 W/16027542-16027542 FN768-S Single Base Substitution G-A INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2446.SNP.2:16027731 chr02:016027731 0 W/16027731-16027731 FN2446 SNP G -> A AC=1;AN=200;BQB=0.600989;DP=4864;DP4=2614,1814,24,4;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0376234;MQB=0.163665;MQSB=1.0893e-34;RPB=0.908433;SGB=58.1418;VDB=0.209444;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.2:16030750 chr02:016030750 0 W/16030750-16030750 FN849-S Single Base Substitution C-G INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-59.SNP.2:16032612 chr02:016032612 0 W/16032612-16032612 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2645-S.SNP.2:16041095 chr02:016041095 0 W/16041095-16041095 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.723157;DP=4526;DP4=2003,2274,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.81337e-12;MQSB=0.689892;RPB=0.776078;SGB=50.3263;VDB=0.943569;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.2:16044003 chr02:016044003 0 W/16044003-16044003 FN-341 Single Base Substitution G-C INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN3556-S.SNP.2:16046783 chr02:016046783 0 W/16046783-16046783 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.998791;DP=2830;DP4=1294,1432,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.68418e-14;MQSB=0.905478;RPB=0.544509;SGB=108.042;VDB=0.0535919;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.2:16047193 chr02:016047193 0 W/16047193-16047193 FN664-S Single Base Substitution C-T INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. W22-2-1.SNP.2:16060029 chr02:016060029 0 W/16060029-16060029 W22-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1573-S.SNP.2:16061659 chr02:016061659 0 W/16061659-16061659 FN1573-S Single Base Substitution C-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3416-S.SNP.2:16068480 chr02:016068480 0 W/16068480-16068480 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.933127;DP=2970;DP4=1475,1409,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59538e-09;MQSB=0.99639;RPB=0.899625;SGB=57.786;VDB=0.691523;EFF=INTRON(MODIFIER||||424|LOC_Os02g27280|protein_coding|CODING|LOC_Os02g27280.1|3|1) FN488-S.SNP.2:16075430 chr02:016075430 0 W/16075430-16075430 FN488-S Single Base Substitution T-A INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1333-S.SNP.2:16076936 chr02:016076936 0 W/16076936-16076936 FN1333-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2791-S.SNP.2:16080524 chr02:016080524 0 W/16080524-16080524 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.726857;DP=3405;DP4=1489,1704,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.42346e-10;MQSB=0.958763;RPB=0.821744;SGB=61.7198;VDB=0.821458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.2:16081442 chr02:016081442 0 W/16081442-16081442 FN2780-S SNP T -> C AC=1;AN=198;BQB=0.472623;DP=4432;DP4=2111,2121,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.15322e-09;MQSB=0.972668;RPB=0.584927;SGB=76.1002;VDB=0.658969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.2:16088791 chr02:016088791 0 W/16088791-16088791 FN3505-S SNP G -> A AC=2;AN=188;BQB=0.130312;DP=3419;DP4=1485,1864,7,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.55865e-06;MQSB=0.998289;RPB=0.99261;SGB=53.7007;VDB=0.983546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E70K|693|LOC_Os02g27310|protein_coding|CODING|LOC_Os02g27310.1|2|1) W475-4-2.SNP.2:16089508 chr02:016089508 0 W/16089508-16089508 W475-4-2 Single Base Substitution C-T INTRON HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3779-S.SNP.2:16095513 chr02:016095513 0 W/16095513-16095513 FN3779-S SNP C -> T AC=1;AN=190;BQB=0.921115;DP=2663;DP4=1504,1050,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53537e-08;MQSB=0.985055;RPB=0.269397;SGB=49.0954;VDB=0.0292593;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.2:16101200 chr02:016101200 0 W/16101200-16101200 FN2125-S SNP G -> T AC=2;AN=168;BQB=0.554416;DP=3429;DP4=1778,1593,21,17;HOB=0.0235261;ICB=0.494119;MQ=27;MQ0F=0.194517;MQB=0.983916;MQSB=6.08524e-21;RPB=0.432416;SGB=-91.6059;VDB=0.168706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L996F|1234|LOC_Os02g27320|protein_coding|CODING|LOC_Os02g27320.1|3|1) FN1392-S.SNP.2:16104784 chr02:016104784 0 W/16104784-16104784 FN1392-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN931-S.SNP.2:16105405 chr02:016105405 0 W/16105405-16105405 FN931-S Single Base Substitution G-C INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2199-S.SNP.2:16112926 chr02:016112926 0 W/16112926-16112926 FN2199-S SNP G -> C AC=1;AN=190;BQB=0.791582;DP=4196;DP4=2303,1670,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.747e-11;MQSB=0.903021;RPB=0.860601;SGB=78.7471;VDB=0.867378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q438H|747|LOC_Os02g27350|protein_coding|CODING|LOC_Os02g27350.1|1|1) FN3376-S.SNP.2:16112957 chr02:016112957 0 W/16112957-16112957 FN3376-S SNP T -> A AC=2;AN=184;BQB=0.830978;DP=2975;DP4=1533,1315,23,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.50008e-23;MQSB=0.700684;RPB=0.971422;SGB=134.358;VDB=0.491883;EFF=INTRON(MODIFIER||||747|LOC_Os02g27350|protein_coding|CODING|LOC_Os02g27350.1|1|1) FN3815-S.SNP.2:16123901 chr02:016123901 0 W/16123901-16123901 FN3815-S SNP A -> C AC=1;AN=190;BQB=0.962664;DP=2489;DP4=1317,1089,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.91143e-06;MQSB=0.990812;RPB=0.720122;SGB=35.4339;VDB=0.443438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.2:16124670 chr02:016124670 0 W/16124670-16124670 FN2304 SNP C -> T AC=1;AN=192;BQB=0.991978;DP=4875;DP4=1952,2691,15,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.8792e-21;MQSB=0.968857;RPB=0.90481;SGB=-2.91736;VDB=0.838917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.2:16128118 chr02:016128118 0 W/16128118-16128118 FN1450-S Single Base Substitution A-C INTERGENIC Homo SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3332-S.SNP.2:16131853 chr02:016131853 0 W/16131853-16131853 FN3332-S SNP G -> A AC=2;AN=184;BQB=0.943884;DP=3058;DP4=1377,1560,21,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27095e-18;MQSB=0.654938;RPB=0.880098;SGB=123.793;VDB=0.458835;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.2:16144712 chr02:016144712 0 W/16144712-16144712 FN-208 Single Base Substitution A-T INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-64.SNP.2:16147394 chr02:016147394 0 W/16147394-16147394 FN-64 Single Base Substitution G-C INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN1465-S.SNP.2:16147394 chr02:016147394 0 W/16147394-16147394 FN1465-S Single Base Substitution G-C INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1556-S.SNP.2:16147394 chr02:016147394 0 W/16147394-16147394 FN1556-S Single Base Substitution G-C INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN3699-S.SNP.2:16147394 chr02:016147394 0 W/16147394-16147394 FN3699-S SNP G -> C AC=1;AN=190;BQB=0.75962;DP=2474;DP4=985,814,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0145513;MQB=6.09535e-05;MQSB=0.000944598;RPB=0.00535225;SGB=90.0802;VDB=3.78094e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.2:16148277 chr02:016148277 0 W/16148277-16148277 FN2494 SNP C -> T AC=1;AN=200;BQB=0.753129;DP=3003;DP4=1345,1424,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90358e-07;MQSB=0.300412;RPB=0.953554;SGB=49.6594;VDB=0.0693264;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.2:16159338 chr02:016159338 0 W/16159338-16159338 FN4040-S SNP G -> A AC=1;AN=168;BQB=0.992212;DP=2615;DP4=1263,1279,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43366e-05;MQSB=0.917883;RPB=0.743725;SGB=17.5943;VDB=0.639818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E747K|809|LOC_Os02g27420|protein_coding|CODING|LOC_Os02g27420.1|6|1),SPLICE_SITE_REGION(LOW||||809|LOC_Os02g27420|protein_coding|CODING|LOC_Os02g27420.1|6|1) FN2794-S.SNP.2:16160754 chr02:016160754 0 W/16160754-16160754 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.127763;DP=4171;DP4=1986,2018,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.85992e-11;MQSB=0.787963;RPB=0.123546;SGB=54.5295;VDB=0.260867;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S46L|115|LOC_Os02g27430|protein_coding|CODING|LOC_Os02g27430.1|1|1) FN1445-S.SNP.2:16176755 chr02:016176755 0 W/16176755-16176755 FN1445-S Single Base Substitution G-A INTRON HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1445-S.SNP.2:16176756 chr02:016176756 0 W/16176756-16176756 FN1445-S Single Base Substitution C-T INTRON HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1445-S.SNP.2:16176757 chr02:016176757 0 W/16176757-16176757 FN1445-S Single Base Substitution C-A INTRON HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2298.SNP.2:16189086 chr02:016189086 0 W/16189086-16189086 FN2298 SNP G -> A AC=1;AN=192;BQB=0.825871;DP=4512;DP4=1945,2286,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.48927e-15;MQSB=0.972245;RPB=0.803561;SGB=57.1218;VDB=0.779631;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.2:16197454 chr02:016197454 0 W/16197454-16197454 FN4021-S SNP C -> T AC=2;AN=168;BQB=0.996499;DP=1790;DP4=505,1191,3,17;HOB=0.0235261;ICB=0.494119;MQ=27;MQ0F=0.136872;MQB=0.934798;MQSB=2.82803e-14;RPB=0.575046;SGB=83.1885;VDB=0.690688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.2:16201766 chr02:016201766 0 W/16201766-16201766 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.000100582;DP=3095;DP4=1464,1587,3,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00244035;MQSB=0.901875;RPB=0.60288;SGB=-114.435;VDB=0.450601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.2:16204891 chr02:016204891 0 W/16204891-16204891 FN1656-S Single Base Substitution A-T INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1656-S.SNP.2:16204892 chr02:016204892 0 W/16204892-16204892 FN1656-S Single Base Substitution A-T INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN3627-S.SNP.2:16207454 chr02:016207454 0 W/16207454-16207454 FN3627-S SNP A -> C AC=1;AN=190;BQB=0.997778;DP=3034;DP4=1514,1425,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64791e-12;MQSB=0.98926;RPB=0.135952;SGB=80.9724;VDB=0.231713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.2:16208779 chr02:016208779 0 W/16208779-16208779 FN3769-S SNP T -> C AC=1;AN=190;BQB=0.933844;DP=2717;DP4=1429,1186,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.41807e-05;MQSB=0.995027;RPB=0.987561;SGB=35.4339;VDB=0.722752;EFF=INTRON(MODIFIER||||675|LOC_Os02g27470|protein_coding|CODING|LOC_Os02g27470.1|2|1) FN2107-S.SNP.2:16209547 chr02:016209547 0 W/16209547-16209547 FN2107-S SNP G -> T AC=1;AN=168;BQB=0.39938;DP=3983;DP4=1861,2088,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.72334e-14;MQSB=0.956159;RPB=0.650323;SGB=-11.4952;VDB=0.615413;EFF=INTRON(MODIFIER||||675|LOC_Os02g27470|protein_coding|CODING|LOC_Os02g27470.1|3|1) FN2107-S.SNP.2:16209548 chr02:016209548 0 W/16209548-16209548 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.794963;DP=3987;DP4=1871,2084,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.82374e-13;MQSB=0.911604;RPB=0.833841;SGB=44.0621;VDB=0.367417;EFF=INTRON(MODIFIER||||675|LOC_Os02g27470|protein_coding|CODING|LOC_Os02g27470.1|3|1) FN4083-S.SNP.2:16218560 chr02:016218560 0 W/16218560-16218560 FN4083-S SNP C -> A AC=2;AN=182;BQB=0.99714;DP=2677;DP4=1267,1309,21,32;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.72501e-30;MQSB=0.925772;RPB=0.861665;SGB=166.091;VDB=0.701198;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.2:16222334 chr02:016222334 0 W/16222334-16222334 FN472-S Single Base Substitution A-G INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN506-S.SNP.2:16222422 chr02:016222422 0 W/16222422-16222422 FN506-S Single Base Substitution A-G INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN3596-S.SNP.2:16222546 chr02:016222546 0 W/16222546-16222546 FN3596-S SNP T -> C AC=2;AN=188;BQB=0.999513;DP=2642;DP4=1361,1219,12,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.01956e-11;MQSB=0.995577;RPB=0.259137;SGB=76.2387;VDB=0.441666;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.2:16240450 chr02:016240450 0 W/16240450-16240450 FN-232 Single Base Substitution G-A INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-364.SNP.2:16242572 chr02:016242572 0 W/16242572-16242572 FN-364 Single Base Substitution A-G INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN1162-S.SNP.2:16260378 chr02:016260378 0 W/16260378-16260378 FN1162-S Single Base Substitution G-A INTRON HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN984-S.SNP.2:16263122 chr02:016263122 0 W/16263122-16263122 FN984-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN953-S.SNP.2:16264112 chr02:016264112 0 W/16264112-16264112 FN953-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2245-S.SNP.2:16268770 chr02:016268770 0 W/16268770-16268770 FN2245-S SNP T -> C AC=1;AN=190;BQB=0.980789;DP=5001;DP4=2115,2585,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.2345e-09;MQSB=0.712814;RPB=0.882526;SGB=21.1058;VDB=0.0931948;EFF=UTR_3_PRIME(MODIFIER||1114||423|LOC_Os02g27490|protein_coding|CODING|LOC_Os02g27490.1|6|1) FN4128-S.SNP.2:16281474 chr02:016281474 0 W/16281474-16281474 FN4128-S SNP G -> C AC=1;AN=182;BQB=0.851811;DP=2859;DP4=1155,1637,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03502e-06;MQSB=0.966553;RPB=0.949382;SGB=15.6115;VDB=0.919643;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.2:16294550 chr02:016294550 0 W/16294550-16294550 FN701-S Single Base Substitution A-C INTRON HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2729-S.SNP.2:16294762 chr02:016294762 0 W/16294762-16294762 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.864315;DP=4417;DP4=1980,2207,15,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.65212e-11;MQSB=0.0850287;RPB=0.925681;SGB=118.737;VDB=0.57429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P1126Q|1311|LOC_Os02g27520|protein_coding|CODING|LOC_Os02g27520.1|8|1) FN1420-S.SNP.2:16302295 chr02:016302295 0 W/16302295-16302295 FN1420-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN4043-S.SNP.2:16303942 chr02:016303942 0 W/16303942-16303942 FN4043-S SNP A -> G AC=1;AN=166;BQB=0.251997;DP=2653;DP4=1275,1247,15,11;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=2.49497e-12;MQSB=0.973846;RPB=0.994372;SGB=48.9237;VDB=0.96238;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.2:16304844 chr02:016304844 0 W/16304844-16304844 FN4125-S SNP T -> A AC=2;AN=182;BQB=0.876812;DP=2999;DP4=1432,1478,9,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.55289e-10;MQSB=0.610946;RPB=0.770577;SGB=66.6657;VDB=0.648217;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.2:16306274 chr02:016306274 0 W/16306274-16306274 FN424-S Single Base Substitution T-C INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN-154.SNP.2:16312423 chr02:016312423 0 W/16312423-16312423 FN-154 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN1269-S.SNP.2:16312423 chr02:016312423 0 W/16312423-16312423 FN1269-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2723-S.SNP.2:16312423 chr02:016312423 0 W/16312423-16312423 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.983565;DP=4934;DP4=2486,2115,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09276e-11;MQSB=0.877996;RPB=0.457513;SGB=54.6902;VDB=0.537072;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T434|599|LOC_Os02g27540|protein_coding|CODING|LOC_Os02g27540.1|4|1) FN_N1-202-3.SNP.2:16315539 chr02:016315539 0 W/16315539-16315539 FN_N1-202-3 Single Base Substitution C-A Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN-265.SNP.2:16320170 chr02:016320170 0 W/16320170-16320170 FN-265 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g27550 hypothetical protein SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3574-S.SNP.2:16330917 chr02:016330917 0 W/16330917-16330917 FN3574-S SNP T -> C AC=1;AN=188;BQB=0.898649;DP=3124;DP4=1419,1597,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.4944e-14;MQSB=0.977709;RPB=0.993854;SGB=71.4172;VDB=0.593401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.2:16330919 chr02:016330919 0 W/16330919-16330919 FN3574-S SNP C -> A AC=1;AN=188;BQB=0.664664;DP=3125;DP4=1387,1625,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74239e-14;MQSB=0.932959;RPB=0.640634;SGB=46.4225;VDB=0.549521;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.2:16339138 chr02:016339138 0 W/16339138-16339138 FN1725-S SNP A -> G AC=1;AN=188;BQB=0.844036;DP=4142;DP4=2255,1847,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.69839e-11;MQSB=0.952325;RPB=0.156231;SGB=46.4225;VDB=0.228048;EFF=SPLICE_SITE_DONOR(HIGH||||70|LOC_Os02g27590|protein_coding|CODING|LOC_Os02g27590.1|1|1),INTRON(MODIFIER||||70|LOC_Os02g27590|protein_coding|CODING|LOC_Os02g27590.1|1|1);LOF=(LOC_Os02g27590|LOC_Os02g27590|1|1.00) FN2271-S.SNP.2:16345338 chr02:016345338 0 W/16345338-16345338 FN2271-S SNP G -> T AC=1;AN=190;BQB=0.919836;DP=3937;DP4=1922,1775,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000254001;MQB=2.96926e-06;MQSB=0.0312374;RPB=0.95018;SGB=49.0954;VDB=0.567407;EFF=UTR_5_PRIME(MODIFIER||314||63|LOC_Os02g27592|protein_coding|CODING|LOC_Os02g27592.1|1|1),UTR_5_PRIME(MODIFIER||314||63|LOC_Os02g27592|protein_coding|CODING|LOC_Os02g27592.2|1|1) FN2794-S.SNP.2:16351820 chr02:016351820 0 W/16351820-16351820 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.576926;DP=4203;DP4=1984,1931,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.3514e-16;MQSB=0.995309;RPB=0.682925;SGB=109.285;VDB=0.421119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.2:16352402 chr02:016352402 0 W/16352402-16352402 FN1655-S Single Base Substitution G-C INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2255-S.SNP.2:16355883 chr02:016355883 0 W/16355883-16355883 FN2255-S SNP A -> C AC=2;AN=190;BQB=0.998007;DP=3897;DP4=1733,1796,4,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.06543e-06;MQSB=0.0726325;RPB=0.998518;SGB=-14.8836;VDB=0.96994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.2:16356306 chr02:016356306 0 W/16356306-16356306 FN1596-S Single Base Substitution C-A INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2751-S.SNP.2:16359360 chr02:016359360 0 W/16359360-16359360 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.265724;DP=4383;DP4=2052,2058,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00016879;MQSB=0.965301;RPB=0.427255;SGB=11.2488;VDB=0.117011;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q29*|139|LOC_Os02g27610|protein_coding|CODING|LOC_Os02g27610.1|1|1) FN3569-S.SNP.2:16371377 chr02:016371377 0 W/16371377-16371377 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.999101;DP=3038;DP4=1633,1309,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.63204e-11;MQSB=0.969475;RPB=0.158133;SGB=80.782;VDB=0.35501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.2:16372863 chr02:016372863 0 W/16372863-16372863 FN2329 SNP G -> A AC=1;AN=192;BQB=0.777338;DP=4774;DP4=2243,2059,7,16;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.45594e-06;MQSB=1.7248e-10;RPB=0.575931;SGB=-38.3774;VDB=0.638946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.2:16374949 chr02:016374949 0 W/16374949-16374949 FN1282-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g27630 retrotransposon protein, putative, unclassified, expressed SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2554-S.SNP.2:16382407 chr02:016382407 0 W/16382407-16382407 FN2554-S SNP C -> A AC=1;AN=198;BQB=0.824845;DP=4077;DP4=1965,1924,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.74176e-07;MQSB=0.937683;RPB=0.908154;SGB=36.5539;VDB=0.964611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M286I|926|LOC_Os02g27650|protein_coding|CODING|LOC_Os02g27650.1|2|1) FN4258-S.SNP.2:16390505 chr02:016390505 0 W/16390505-16390505 FN4258-S SNP A -> G AC=2;AN=170;BQB=0.998769;DP=2278;DP4=958,1203,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.46705e-14;MQSB=0.437684;RPB=0.510114;SGB=92.2986;VDB=0.723218;EFF=INTRON(MODIFIER||||94|LOC_Os02g27660|protein_coding|CODING|LOC_Os02g27660.1|1|1) FN4258-S.SNP.2:16390516 chr02:016390516 0 W/16390516-16390516 FN4258-S SNP A -> T AC=2;AN=170;BQB=0.884348;DP=2304;DP4=1020,1200,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.75072e-14;MQSB=0.55815;RPB=0.973817;SGB=65.8619;VDB=0.760788;EFF=INTRON(MODIFIER||||94|LOC_Os02g27660|protein_coding|CODING|LOC_Os02g27660.1|1|1) FN3897-S.SNP.2:16391596 chr02:016391596 0 W/16391596-16391596 FN3897-S SNP G -> A AC=2;AN=158;BQB=0.849347;DP=2271;DP4=1037,1075,20,18;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=1.70918e-13;MQSB=0.00731405;RPB=0.999094;SGB=118.31;VDB=0.752889;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.2:16406979 chr02:016406979 0 W/16406979-16406979 FN4258-S SNP T -> G AC=2;AN=170;BQB=0.988691;DP=1765;DP4=1221,487,9,2;HOB=0.0232526;ICB=0.494188;MQ=37;MQ0F=0.00113314;MQB=0.763857;MQSB=0;RPB=0.901956;SGB=27.9928;VDB=0.285576;EFF=INTRON(MODIFIER||||546|LOC_Os02g27690|protein_coding|CODING|LOC_Os02g27690.1|1|1) FN1550-S.SNP.2:16408712 chr02:016408712 0 W/16408712-16408712 FN1550-S Single Base Substitution G-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2704-S.SNP.2:16415375 chr02:016415375 0 W/16415375-16415375 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.920056;DP=5098;DP4=2367,2446,22,19;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=1.05195e-15;MQSB=0.0680101;RPB=0.964221;SGB=137.609;VDB=0.764235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L319F|413|LOC_Os02g27710|protein_coding|CODING|LOC_Os02g27710.1|2|1) FN2432.SNP.2:16453338 chr02:016453338 0 W/16453338-16453338 FN2432 SNP C -> T AC=1;AN=200;BQB=0.572415;DP=4632;DP4=2327,2073,12,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.54453e-12;MQSB=0.957138;RPB=0.388256;SGB=42.5108;VDB=0.696825;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.2:16481609 chr02:016481609 0 W/16481609-16481609 FN684-S Single Base Substitution G-A INTRON HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1124-S.SNP.2:16497120 chr02:016497120 0 W/16497120-16497120 FN1124-S Single Base Substitution G-A INTRON HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2285.SNP.2:16499236 chr02:016499236 0 W/16499236-16499236 FN2285 SNP A -> T AC=2;AN=192;BQB=0.99788;DP=4486;DP4=2100,2090,13,20;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0;MQB=3.64821e-05;MQSB=1.86597e-06;RPB=0.994076;SGB=32.3844;VDB=0.892563;EFF=UTR_5_PRIME(MODIFIER||90||147|LOC_Os02g27870|protein_coding|CODING|LOC_Os02g27870.2|4|1),INTRON(MODIFIER||||289|LOC_Os02g27870|protein_coding|CODING|LOC_Os02g27870.1|5|1) FN2210-S.SNP.2:16505953 chr02:016505953 0 W/16505953-16505953 FN2210-S SNP T -> C AC=1;AN=190;BQB=0.991707;DP=5114;DP4=2256,2455,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=6.91176e-12;MQSB=0.657038;RPB=0.941742;SGB=-9.34484;VDB=0.24124;EFF=INTRON(MODIFIER||||277|LOC_Os02g27880|protein_coding|CODING|LOC_Os02g27880.1|4|1) FN483-S.SNP.2:16513223 chr02:016513223 0 W/16513223-16513223 FN483-S Single Base Substitution C-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN430-S.SNP.2:16516010 chr02:016516010 0 W/16516010-16516010 FN430-S Single Base Substitution T-A INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3368-S.SNP.2:16521861 chr02:016521861 0 W/16521861-16521861 FN3368-S SNP G -> T AC=1;AN=184;BQB=0.997173;DP=2280;DP4=924,1269,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.000438597;MQB=0.520505;MQSB=0.419791;RPB=0.166119;SGB=48.7425;VDB=0.0549406;EFF=INTRON(MODIFIER||||267|LOC_Os02g27920|protein_coding|CODING|LOC_Os02g27920.1|1|1) FN4152-S.SNP.2:16534227 chr02:016534227 0 W/16534227-16534227 FN4152-S SNP T -> C AC=1;AN=170;BQB=0.990193;DP=2588;DP4=1370,1145,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=5.17046e-07;MQSB=0.0124452;RPB=0.104638;SGB=47.8722;VDB=0.0210124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.2:16536769 chr02:016536769 0 W/16536769-16536769 FN2347 SNP A -> T AC=1;AN=192;BQB=0.589549;DP=4696;DP4=2306,2126,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=2.12544e-05;MQSB=0.00153925;RPB=0.511326;SGB=68.2948;VDB=0.430636;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.2:16547126 chr02:016547126 0 W/16547126-16547126 FN_827-1 Single Base Substitution A-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1286-S.SNP.2:16549418 chr02:016549418 0 W/16549418-16549418 FN1286-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN774-S.SNP.2:16557824 chr02:016557824 0 W/16557824-16557824 FN774-S Single Base Substitution A-G INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1399-S.SNP.2:16566195 chr02:016566195 0 W/16566195-16566195 FN1399-S Single Base Substitution A-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN494-S.SNP.2:16571054 chr02:016571054 0 W/16571054-16571054 FN494-S Single Base Substitution C-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-284.SNP.2:16574387 chr02:016574387 0 W/16574387-16574387 FN-284 Single Base Substitution G-A INTERGENIC HOMO SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN1468-S.SNP.2:16607962 chr02:016607962 0 W/16607962-16607962 FN1468-S Single Base Substitution C-G INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1715-S.SNP.2:16619728 chr02:016619728 0 W/16619728-16619728 FN1715-S SNP A -> T AC=1;AN=188;BQB=0.241096;DP=3702;DP4=1613,2055,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.20489e-13;MQSB=0.955587;RPB=0.79693;SGB=46.4225;VDB=0.934527;EFF=INTRON(MODIFIER||||822|LOC_Os02g28074|protein_coding|CODING|LOC_Os02g28074.1|6|1),INTRON(MODIFIER||||756|LOC_Os02g28074|protein_coding|CODING|LOC_Os02g28074.2|5|1) FN1269-S.SNP.2:16632726 chr02:016632726 0 W/16632726-16632726 FN1269-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g28074 XRN 5-3 exonuclease N-terminus family protein, expressed SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN_777-2-1.SNP.2:16642219 chr02:016642219 0 W/16642219-16642219 FN_777-2-1 Single Base Substitution T-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3537-S.SNP.2:16652768 chr02:016652768 0 W/16652768-16652768 FN3537-S SNP A -> G AC=2;AN=188;BQB=0.807853;DP=3115;DP4=1357,1644,9,15;HOB=0.0210502;ICB=0.494738;MQ=32;MQ0F=0;MQB=0.00542565;MQSB=0.00426312;RPB=0.441972;SGB=103.498;VDB=0.932242;EFF=INTRON(MODIFIER||||64|LOC_Os02g28120|protein_coding|CODING|LOC_Os02g28120.1|1|1) FN1024-S.SNP.2:16653387 chr02:016653387 0 W/16653387-16653387 FN1024-S Single Base Substitution G-A INTRON HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-291.SNP.2:16655976 chr02:016655976 0 W/16655976-16655976 FN-291 Single Base Substitution C-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1485-S.SNP.2:16658256 chr02:016658256 0 W/16658256-16658256 FN1485-S Single Base Substitution C-A INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN3468-S.SNP.2:16679172 chr02:016679172 0 W/16679172-16679172 FN3468-S SNP G -> A AC=1;AN=184;BQB=0.929537;DP=3744;DP4=1700,1923,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=2.73176e-08;MQSB=0.00011081;RPB=0.447383;SGB=66.8296;VDB=0.331828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R272C|488|LOC_Os02g28170|protein_coding|CODING|LOC_Os02g28170.1|1|1) FN2136-S.SNP.2:16684990 chr02:016684990 0 W/16684990-16684990 FN2136-S SNP C -> A AC=1;AN=168;BQB=0.904837;DP=3422;DP4=1620,1747,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=6.30281e-08;MQSB=0.915834;RPB=0.977127;SGB=58.7637;VDB=0.802164;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.2:16686961 chr02:016686961 0 W/16686961-16686961 FN778-S Single Base Substitution G-A INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN835-S.SNP.2:16690944 chr02:016690944 0 W/16690944-16690944 FN835-S Single Base Substitution G-A INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1548-S.SNP.2:16695843 chr02:016695843 0 W/16695843-16695843 FN1548-S SNP A -> G AC=1;AN=188;BQB=0.20728;DP=3450;DP4=1711,1701,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.53082e-06;MQSB=0.91605;RPB=0.570828;SGB=-54.619;VDB=0.04846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.2:16697007 chr02:016697007 0 W/16697007-16697007 FN2243-S SNP C -> A AC=1;AN=190;BQB=0.0390308;DP=4972;DP4=2147,2334,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.00131622;MQSB=0.00482224;RPB=0.973613;SGB=28.9929;VDB=0.708194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.2:16720148 chr02:016720148 0 W/16720148-16720148 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.508447;DP=2899;DP4=1175,1615,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.0183534;MQSB=0.0361665;RPB=0.659458;SGB=53.6492;VDB=0.58133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.2:16727582 chr02:016727582 0 W/16727582-16727582 FN3849-S SNP T -> C AC=1;AN=158;BQB=0.845326;DP=2568;DP4=1087,1348,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.000389408;MQB=3.61245e-05;MQSB=2.57026e-05;RPB=0.907175;SGB=77.6532;VDB=0.817713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V403A|474|LOC_Os02g28300|protein_coding|CODING|LOC_Os02g28300.1|1|1) FN3897-S.SNP.2:16734494 chr02:016734494 0 W/16734494-16734494 FN3897-S SNP A -> C AC=2;AN=158;BQB=7.48293e-11;DP=621;DP4=304,282,11,6;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0;MQB=0.662565;MQSB=0.777253;RPB=0.97526;SGB=65.479;VDB=3.60923e-06;EFF=INTRON(MODIFIER||||274|LOC_Os02g28310|protein_coding|CODING|LOC_Os02g28310.1|1|1) FN4098-S.SNP.2:16772548 chr02:016772548 0 W/16772548-16772548 FN4098-S SNP A -> T AC=1;AN=182;BQB=0.992738;DP=3297;DP4=1650,1533,16,11;HOB=6.03792e-05;ICB=0.000121422;MQ=30;MQ0F=0.134365;MQB=0.420121;MQSB=0.336261;RPB=0.0770997;SGB=116.285;VDB=0.305302;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I256|942|LOC_Os02g28380|protein_coding|CODING|LOC_Os02g28380.1|2|1) FN3355-S.SNP.2:16807470 chr02:016807470 0 W/16807470-16807470 FN3355-S SNP T -> G AC=2;AN=184;BQB=0.907534;DP=2555;DP4=1299,976,7,11;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0;MQB=0.000397948;MQSB=0.592052;RPB=0.773948;SGB=8.32411;VDB=0.269073;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.2:16814490 chr02:016814490 0 W/16814490-16814490 FN4088-S SNP C -> T AC=2;AN=182;BQB=0.9692;DP=3301;DP4=1573,1636,10,11;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=1.37791e-13;MQSB=0.00282941;RPB=0.97417;SGB=63.7146;VDB=0.590314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.2:16814492 chr02:016814492 0 W/16814492-16814492 FN4088-S SNP C -> G AC=2;AN=182;BQB=0.869889;DP=3292;DP4=1545,1648,8,11;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=2.04489e-12;MQSB=0.0164571;RPB=0.878215;SGB=80.1982;VDB=0.595505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.2:16818781 chr02:016818781 0 W/16818781-16818781 FN1668-S SNP G -> A AC=1;AN=188;BQB=0.897673;DP=2764;DP4=1130,1606,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000313808;MQSB=0.000311947;RPB=0.998223;SGB=26.0762;VDB=0.840515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.2:16821976 chr02:016821976 0 W/16821976-16821976 FN-71 Single Base Substitution C-T INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3956-S.SNP.2:16824624 chr02:016824624 0 W/16824624-16824624 FN3956-S SNP G -> A AC=2;AN=166;BQB=0.898543;DP=2871;DP4=1306,1470,14,25;HOB=0.0238061;ICB=0.494049;MQ=40;MQ0F=0;MQB=3.92985e-08;MQSB=0.0599165;RPB=0.800185;SGB=80.5243;VDB=0.758108;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W2*|73|LOC_Os02g28450|protein_coding|CODING|LOC_Os02g28450.1|1|1);LOF=(LOC_Os02g28450|LOC_Os02g28450|1|1.00);NMD=(LOC_Os02g28450|LOC_Os02g28450|1|1.00) FN-285.SNP.2:16825524 chr02:016825524 0 W/16825524-16825524 FN-285 Single Base Substitution G-C INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3714-S.SNP.2:16828699 chr02:016828699 0 W/16828699-16828699 FN3714-S SNP T -> A AC=1;AN=190;BQB=0.904416;DP=2798;DP4=1249,1436,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0;MQB=0.000102835;MQSB=0.00183725;RPB=0.219947;SGB=75.1932;VDB=0.137467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.2:16834154 chr02:016834154 0 W/16834154-16834154 FN2440 SNP T -> C AC=1;AN=200;BQB=0.46391;DP=3461;DP4=1803,1525,6,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00462294;MQB=0.00164396;MQSB=0;RPB=0.975153;SGB=35.8441;VDB=0.885341;EFF=UTR_3_PRIME(MODIFIER||1500||117|LOC_Os02g28465|protein_coding|CODING|LOC_Os02g28465.1|1|1) FN4044-S.SNP.2:16840117 chr02:016840117 0 W/16840117-16840117 FN4044-S SNP T -> A AC=1;AN=166;BQB=0.995093;DP=2454;DP4=1128,1184,7,10;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=3.96143e-08;MQSB=0.967229;RPB=0.948649;SGB=69.8961;VDB=0.83796;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.2:16849058 chr02:016849058 0 W/16849058-16849058 FN4101-S SNP T -> C AC=1;AN=182;BQB=0.975899;DP=2779;DP4=1273,1445,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0;MQB=0.00340142;MQSB=0.0251037;RPB=0.804835;SGB=53.1331;VDB=0.0834917;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V32|124|LOC_Os02g28490|protein_coding|CODING|LOC_Os02g28490.1|1|1) FN447-S.SNP.2:16850263 chr02:016850263 0 W/16850263-16850263 FN447-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g28490 expressed protein SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN3860-S.SNP.2:16851781 chr02:016851781 0 W/16851781-16851781 FN3860-S SNP T -> C AC=2;AN=158;BQB=0.849535;DP=1832;DP4=717,960,13,13;HOB=0.024996;ICB=0.493752;MQ=32;MQ0F=0.000545852;MQB=0.00171318;MQSB=0.291598;RPB=0.589903;SGB=-73.9392;VDB=8.84369e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.2:16871128 chr02:016871128 0 W/16871128-16871128 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.0556951;DP=4050;DP4=2059,1936,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68621e-08;MQSB=0.102014;RPB=0.997148;SGB=-137.195;VDB=0.422538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.2:16871852 chr02:016871852 0 W/16871852-16871852 FN1374-S Single Base Substitution A-G INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN997-S.SNP.2:16873221 chr02:016873221 0 W/16873221-16873221 FN997-S Single Base Substitution A-G INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN4069-S.SNP.2:16876343 chr02:016876343 0 W/16876343-16876343 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.967475;DP=2943;DP4=1451,1427,11,15;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.0309208;MQB=0.298086;MQSB=2.80127e-10;RPB=0.260245;SGB=111.774;VDB=0.132202;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A575T|959|LOC_Os02g28520|protein_coding|CODING|LOC_Os02g28520.1|4|1) FN2258-S.SNP.2:16881076 chr02:016881076 0 W/16881076-16881076 FN2258-S SNP C -> T AC=1;AN=190;BQB=0.88689;DP=2246;DP4=1013,1098,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0;MQB=0.0874968;MQSB=0.230271;RPB=0.731212;SGB=32.5467;VDB=0.00173573;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.2:16889705 chr02:016889705 0 W/16889705-16889705 FN891-S Single Base Substitution C-T INTRON HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2557-S.SNP.2:16892158 chr02:016892158 0 W/16892158-16892158 FN2557-S SNP A -> G AC=1;AN=198;BQB=0.979696;DP=3624;DP4=1591,1822,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.00607064;MQB=0.902887;MQSB=0.599584;RPB=0.267347;SGB=54.144;VDB=0.0461546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K743R|862|LOC_Os02g28550|protein_coding|CODING|LOC_Os02g28550.1|6|1) FN2408.SNP.2:16910032 chr02:016910032 0 W/16910032-16910032 FN2408 SNP T -> C AC=1;AN=200;BQB=0.972965;DP=4622;DP4=2133,2189,17,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.15031e-10;MQSB=0.950959;RPB=0.987809;SGB=127.947;VDB=0.543178;EFF=INTRON(MODIFIER||||186|LOC_Os02g28570|protein_coding|CODING|LOC_Os02g28570.1|3|1) FN1481-S.SNP.2:16919823 chr02:016919823 0 W/16919823-16919823 FN1481-S Single Base Substitution C-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1061-S.SNP.2:16929135 chr02:016929135 0 W/16929135-16929135 FN1061-S Single Base Substitution T-C INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN482-S.SNP.2:16956566 chr02:016956566 0 W/16956566-16956566 FN482-S Single Base Substitution G-T INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN1396-S.SNP.2:16963631 chr02:016963631 0 W/16963631-16963631 FN1396-S Single Base Substitution A-G INTRON HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN452-S.SNP.2:16978207 chr02:016978207 0 W/16978207-16978207 FN452-S Single Base Substitution C-A INTERGENIC HOMO SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN3887-S.SNP.2:16988069 chr02:016988069 0 W/16988069-16988069 FN3887-S SNP T -> C AC=1;AN=158;BQB=0.964519;DP=2329;DP4=926,1312,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0;MQB=0.00840051;MQSB=0.739672;RPB=0.83622;SGB=42.6978;VDB=0.51555;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.2:17001269 chr02:017001269 0 W/17001269-17001269 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.946436;DP=1573;DP4=622,856,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0;MQB=0.0203174;MQSB=4.45672e-08;RPB=0.477044;SGB=76.4186;VDB=0.86794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T129M|189|LOC_Os02g28730|protein_coding|CODING|LOC_Os02g28730.1|1|1) FN1287-S.SNP.2:17024515 chr02:017024515 0 W/17024515-17024515 FN1287-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3505-S.SNP.2:17035029 chr02:017035029 0 W/17035029-17035029 FN3505-S SNP A -> T AC=2;AN=188;BQB=0.970362;DP=2057;DP4=949,1025,4,10;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0;MQB=1.18483e-06;MQSB=0.6443;RPB=0.0555143;SGB=58.0655;VDB=0.155184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.2:17041153 chr02:017041153 0 W/17041153-17041153 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.973892;DP=2935;DP4=1533,1307,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.659e-05;MQSB=0.105281;RPB=0.721232;SGB=25.1826;VDB=0.498274;EFF=UTR_3_PRIME(MODIFIER||198||323|LOC_Os02g28820|protein_coding|CODING|LOC_Os02g28820.1|1|1) FN3987-S.SNP.2:17041450 chr02:017041450 0 W/17041450-17041450 FN3987-S SNP G -> A AC=2;AN=168;BQB=0.931147;DP=2307;DP4=1161,1050,16,9;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.29122e-12;MQSB=0.264054;RPB=0.919398;SGB=105.343;VDB=0.371351;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.2:17041689 chr02:017041689 0 W/17041689-17041689 FN4189-S SNP C -> T AC=2;AN=170;BQB=0.857431;DP=2143;DP4=1112,964,9,7;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=1.44269e-05;MQSB=7.29677e-06;RPB=0.907166;SGB=65.6427;VDB=0.867437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.2:17042855 chr02:017042855 0 W/17042855-17042855 FN2731-S SNP T -> A AC=1;AN=200;BQB=0.948309;DP=5003;DP4=2485,2342,14,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.8766e-08;MQSB=0.372005;RPB=0.429491;SGB=90.7419;VDB=0.699021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.2:17046560 chr02:017046560 0 W/17046560-17046560 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.260037;DP=3146;DP4=1854,1181,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00069622;MQSB=0.714017;RPB=0.979273;SGB=15.9981;VDB=0.628582;EFF=UTR_3_PRIME(MODIFIER||236||647|LOC_Os02g28830|protein_coding|CODING|LOC_Os02g28830.1|19|1) FN4166-S.SNP.2:17049346 chr02:017049346 0 W/17049346-17049346 FN4166-S SNP T -> A AC=2;AN=170;BQB=0.973486;DP=2607;DP4=1345,1159,14,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.02895e-13;MQSB=0.998452;RPB=0.999948;SGB=96.7413;VDB=0.467349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S226C|647|LOC_Os02g28830|protein_coding|CODING|LOC_Os02g28830.1|8|1),SPLICE_SITE_REGION(LOW||||647|LOC_Os02g28830|protein_coding|CODING|LOC_Os02g28830.1|8|1) FN-64.SNP.2:17054389 chr02:017054389 0 W/17054389-17054389 FN-64 Single Base Substitution C-T INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN1725-S.SNP.2:17054934 chr02:017054934 0 W/17054934-17054934 FN1725-S SNP C -> A AC=1;AN=188;BQB=0.677848;DP=2313;DP4=1186,1091,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.58976e-08;MQSB=0.698005;RPB=0.992849;SGB=8.62479;VDB=0.306897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.2:17058106 chr02:017058106 0 W/17058106-17058106 FN2479 SNP G -> A AC=1;AN=200;BQB=0.870944;DP=3843;DP4=1609,1908,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.03436e-08;MQSB=0.998149;RPB=0.938256;SGB=-13.1102;VDB=0.919698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.2:17060666 chr02:017060666 0 W/17060666-17060666 FN3855-S SNP C -> T AC=2;AN=158;BQB=0.977963;DP=2185;DP4=1116,989,19,8;HOB=0.024996;ICB=0.493752;MQ=40;MQ0F=0;MQB=1.92741e-07;MQSB=8.52507e-07;RPB=0.0358533;SGB=81.2457;VDB=0.106254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.2:17060839 chr02:017060839 0 W/17060839-17060839 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.999806;DP=4483;DP4=2328,1915,18,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24898e-12;MQSB=0.730273;RPB=0.867578;SGB=113.881;VDB=0.973972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.2:17065475 chr02:017065475 0 W/17065475-17065475 FN-125 Single Base Substitution A-T INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN730-S.SNP.2:17070111 chr02:017070111 0 W/17070111-17070111 FN730-S Single Base Substitution G-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-159.SNP.2:17071746 chr02:017071746 0 W/17071746-17071746 FN-159 Single Base Substitution G-T INTERGENIC HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN1053-S.SNP.2:17071868 chr02:017071868 0 W/17071868-17071868 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN747-S.SNP.2:17098381 chr02:017098381 0 W/17098381-17098381 FN747-S Single Base Substitution A-G INTERGENIC HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3903-S.SNP.2:17122954 chr02:017122954 0 W/17122954-17122954 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.977625;DP=2242;DP4=1167,1006,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.29674e-11;MQSB=0.840592;RPB=0.996499;SGB=26.1881;VDB=0.910077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.2:17125692 chr02:017125692 0 W/17125692-17125692 FN3632-S SNP G -> A AC=1;AN=190;BQB=0.896252;DP=2845;DP4=1440,1289,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04083e-10;MQSB=0.698041;RPB=0.435512;SGB=64.5316;VDB=0.451211;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T142|161|LOC_Os02g28910|protein_coding|CODING|LOC_Os02g28910.1|1|1) FN3935-S.SNP.2:17126500 chr02:017126500 0 W/17126500-17126500 FN3935-S SNP G -> A AC=1;AN=158;BQB=0.853892;DP=2250;DP4=1083,1031,12,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.14192e-14;MQSB=0.999998;RPB=0.873379;SGB=15.7806;VDB=0.296825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.2:17138005 chr02:017138005 0 W/17138005-17138005 FN3949-S SNP G -> A AC=2;AN=168;BQB=0.0771517;DP=2806;DP4=1120,1566,11,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.225e-07;MQSB=0.888627;RPB=0.844286;SGB=56.2162;VDB=0.303951;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A282V|478|LOC_Os02g28960|protein_coding|CODING|LOC_Os02g28960.1|2|1) FN3632-S.SNP.2:17151748 chr02:017151748 0 W/17151748-17151748 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.199746;DP=3326;DP4=1705,1507,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.62346e-06;MQSB=0.899338;RPB=0.737481;SGB=62.7569;VDB=0.844399;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A395V|583|LOC_Os02g28970|protein_coding|CODING|LOC_Os02g28970.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A395V|583|LOC_Os02g28970|protein_coding|CODING|LOC_Os02g28970.1|1|1) FN1520-S.SNP.2:17154389 chr02:017154389 0 W/17154389-17154389 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2534-S.SNP.2:17163375 chr02:017163375 0 W/17163375-17163375 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.985628;DP=4043;DP4=1956,1886,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.72342e-07;MQSB=0.996938;RPB=0.396064;SGB=58.7391;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.2:17181979 chr02:017181979 0 W/17181979-17181979 FN3820-S SNP C -> A AC=1;AN=190;BQB=0.941968;DP=2877;DP4=1295,1510,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0187696;MQB=0.00317001;MQSB=0.0738485;RPB=0.454067;SGB=43.2083;VDB=0.565451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A483S|1669|LOC_Os02g29030|protein_coding|CODING|LOC_Os02g29030.1|11|1) FN1200-S.SNP.2:17185826 chr02:017185826 0 W/17185826-17185826 FN1200-S Single Base Substitution G-T INTRON HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1658-S.SNP.2:17186373 chr02:017186373 0 W/17186373-17186373 FN1658-S SNP A -> G AC=1;AN=188;BQB=0.319003;DP=3673;DP4=1714,1918,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000544514;MQB=6.19205e-07;MQSB=0.0259514;RPB=0.223943;SGB=-12.2833;VDB=0.903936;EFF=INTRON(MODIFIER||||1669|LOC_Os02g29030|protein_coding|CODING|LOC_Os02g29030.1|7|1) FN2274-S.SNP.2:17198258 chr02:017198258 0 W/17198258-17198258 FN2274-S SNP A -> T AC=1;AN=190;BQB=0.0863524;DP=4067;DP4=2196,1610,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000491763;MQB=8.69931e-08;MQSB=7.73995e-12;RPB=0.596629;SGB=36.4291;VDB=0.501241;EFF=INTRON(MODIFIER||||302|LOC_Os02g29040|protein_coding|CODING|LOC_Os02g29040.1|8|1),INTRON(MODIFIER||||235|LOC_Os02g29040|protein_coding|CODING|LOC_Os02g29040.2|7|1) FN2404.SNP.2:17202110 chr02:017202110 0 W/17202110-17202110 FN2404 SNP A -> C AC=2;AN=200;BQB=0.945125;DP=4997;DP4=2475,2152,41,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.41519e-39;MQSB=0.962781;RPB=0.958474;SGB=121.611;VDB=0.573997;EFF=INTRON(MODIFIER||||302|LOC_Os02g29040|protein_coding|CODING|LOC_Os02g29040.1|4|1),INTRON(MODIFIER||||235|LOC_Os02g29040|protein_coding|CODING|LOC_Os02g29040.2|3|1) FN769-S.SNP.2:17208586 chr02:017208586 0 W/17208586-17208586 FN769-S Single Base Substitution T-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1278-S.SNP.2:17213996 chr02:017213996 0 W/17213996-17213996 FN1278-S Single Base Substitution A-G INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1278-S.SNP.2:17214370 chr02:017214370 0 W/17214370-17214370 FN1278-S Single Base Substitution A-G INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2711-S.SNP.2:17215203 chr02:017215203 0 W/17215203-17215203 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.907602;DP=4313;DP4=2317,1644,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.19617e-09;MQSB=0.962424;RPB=0.434179;SGB=58.8698;VDB=0.406196;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.2:17223059 chr02:017223059 0 W/17223059-17223059 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.994835;DP=3521;DP4=1870,1551,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31377e-12;MQSB=0.96851;RPB=0.250651;SGB=67.4439;VDB=0.398936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.2:17223595 chr02:017223595 0 W/17223595-17223595 FN2628-S SNP T -> A AC=1;AN=200;BQB=0.902111;DP=4308;DP4=1911,2181,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34348e-13;MQSB=0.56578;RPB=0.994435;SGB=42.5108;VDB=0.972962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.2:17231973 chr02:017231973 0 W/17231973-17231973 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.701197;DP=5180;DP4=2411,2464,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49418e-09;MQSB=0.260189;RPB=0.973026;SGB=32.0901;VDB=0.684248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.2:17232817 chr02:017232817 0 W/17232817-17232817 FN3863-S SNP T -> A AC=1;AN=158;BQB=0.875774;DP=2454;DP4=1226,1106,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00488998;MQB=0.00167473;MQSB=0.0454435;RPB=0.789523;SGB=64.5449;VDB=0.725062;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.2:17234292 chr02:017234292 0 W/17234292-17234292 FN3793-S SNP G -> A AC=1;AN=190;BQB=0.23051;DP=2577;DP4=1186,1260,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39582e-06;MQSB=0.976977;RPB=0.427261;SGB=39.6545;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.2:17240848 chr02:017240848 0 W/17240848-17240848 FN1446-S Single Base Substitution C-G INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN-103.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN-103 Single Base Substitution C-A INTRON HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN-298.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN-298 Single Base Substitution C-A INTRON HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1099-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN1099-S Single Base Substitution C-A INTRON HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2158-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN2158-S SNP C -> A AC=2;AN=168;BQB=0.00641527;DP=4004;DP4=1883,2057,24,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.06723e-18;MQSB=0.987382;RPB=0.990031;SGB=-157.153;VDB=0.939205;EFF=INTRON(MODIFIER||||442|LOC_Os02g29140|protein_coding|CODING|LOC_Os02g29140.1|8|1) FN2353.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN2353 SNP C -> A AC=2;AN=192;BQB=0.993475;DP=4815;DP4=2110,2343,17,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.05413e-18;MQSB=0.735232;RPB=0.47765;SGB=33.9487;VDB=0.66685;EFF=INTRON(MODIFIER||||442|LOC_Os02g29140|protein_coding|CODING|LOC_Os02g29140.1|8|1) FN2611-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN2611-S SNP C -> A AC=1;AN=200;BQB=0.320824;DP=4254;DP4=1987,1993,31,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.03263e-28;MQSB=0.957439;RPB=0.841951;SGB=159.24;VDB=0.357134;EFF=INTRON(MODIFIER||||442|LOC_Os02g29140|protein_coding|CODING|LOC_Os02g29140.1|8|1) FN3838-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN3838-S SNP C -> A AC=2;AN=190;BQB=0.723788;DP=2546;DP4=1123,1312,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.54882e-10;MQSB=0.964;RPB=0.801199;SGB=85.5263;VDB=0.311508;EFF=INTRON(MODIFIER||||442|LOC_Os02g29140|protein_coding|CODING|LOC_Os02g29140.1|8|1) FN484-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN484-S Single Base Substitution C-A INTRON HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN753-S.SNP.2:17259792 chr02:017259792 0 W/17259792-17259792 FN753-S Single Base Substitution C-A INTRON HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2398.SNP.2:17261328 chr02:017261328 0 W/17261328-17261328 FN2398 SNP C -> T AC=2;AN=200;BQB=0.624995;DP=4428;DP4=2224,1962,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.51115e-20;MQSB=0.995796;RPB=0.429948;SGB=155.578;VDB=0.499208;EFF=INTRON(MODIFIER||||442|LOC_Os02g29140|protein_coding|CODING|LOC_Os02g29140.1|5|1) FN4234-S.SNP.2:17266880 chr02:017266880 0 W/17266880-17266880 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.852605;DP=2631;DP4=1298,1243,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=2.26216e-06;MQSB=0.00892319;RPB=0.993565;SGB=65.6427;VDB=0.849155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.2:17267034 chr02:017267034 0 W/17267034-17267034 FN2659-S SNP G -> C AC=1;AN=200;BQB=0.833736;DP=4777;DP4=2285,2231,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50772e-08;MQSB=0.665499;RPB=0.895038;SGB=19.0642;VDB=0.537189;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.2:17274314 chr02:017274314 0 W/17274314-17274314 FN_789-2-1 Single Base Substitution C-T HET LOC_Os02g29150 OsFBO11 - F-box and other domain containing protein, expressed SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2621-S.SNP.2:17274777 chr02:017274777 0 W/17274777-17274777 FN2621-S SNP G -> A AC=2;AN=200;BQB=0.68735;DP=4847;DP4=2222,2336,39,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.12729e-39;MQSB=0.967964;RPB=0.41392;SGB=287.987;VDB=0.0888496;EFF=INTRON(MODIFIER||||663|LOC_Os02g29150|protein_coding|CODING|LOC_Os02g29150.1|1|1),INTRON(MODIFIER||||528|LOC_Os02g29150|protein_coding|CODING|LOC_Os02g29150.2|1|1) FN_830-6-1.SNP.2:17276833 chr02:017276833 0 W/17276833-17276833 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN_830-6-1.SNP.2:17276836 chr02:017276836 0 W/17276836-17276836 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3806-S.SNP.2:17277921 chr02:017277921 0 W/17277921-17277921 FN3806-S SNP T -> C AC=1;AN=190;BQB=0.920509;DP=2792;DP4=1406,1241,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.87721e-07;MQSB=0.73183;RPB=0.994798;SGB=49.0954;VDB=0.647518;EFF=INTRON(MODIFIER||||447|LOC_Os02g29160|protein_coding|CODING|LOC_Os02g29160.1|11|1) FN1222-S.SNP.2:17295538 chr02:017295538 0 W/17295538-17295538 FN1222-S Single Base Substitution C-T INTRON HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2191-S.SNP.2:17296219 chr02:017296219 0 W/17296219-17296219 FN2191-S SNP A -> G AC=1;AN=190;BQB=0.752176;DP=5038;DP4=2596,2133,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198491;MQB=9.53793e-12;MQSB=0.908049;RPB=0.590624;SGB=78.7471;VDB=0.965708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.2:17299069 chr02:017299069 0 W/17299069-17299069 FN1292-S Single Base Substitution T-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2564-S.SNP.2:17300614 chr02:017300614 0 W/17300614-17300614 FN2564-S SNP G -> A AC=2;AN=198;BQB=0.0761922;DP=3010;DP4=1005,1775,5,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.87819e-08;MQSB=0.031387;RPB=0.221583;SGB=40.149;VDB=0.278007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.2:17300615 chr02:017300615 0 W/17300615-17300615 FN2564-S SNP G -> A AC=2;AN=198;BQB=0.452813;DP=3007;DP4=1028,1755,5,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.7628e-10;MQSB=0.0320517;RPB=0.136825;SGB=6.15916;VDB=0.142522;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.2:17303077 chr02:017303077 0 W/17303077-17303077 FN4043-S SNP G -> T AC=1;AN=168;BQB=0.214003;DP=2415;DP4=1259,1048,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.43614e-06;MQSB=0.997945;RPB=0.968634;SGB=24.6155;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.2:17306972 chr02:017306972 0 W/17306972-17306972 FN302-S Single Base Substitution T-C INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2200-S.SNP.2:17307170 chr02:017307170 0 W/17307170-17307170 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.70777;DP=4426;DP4=2079,1965,5,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000225938;MQB=4.37201e-13;MQSB=0.327251;RPB=0.929061;SGB=41.5369;VDB=0.529851;EFF=INTERGENIC(MODIFIER||||||||||1) FN726-S.SNP.2:17321536 chr02:017321536 0 W/17321536-17321536 FN726-S Single Base Substitution G-A INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2608-S.SNP.2:17321643 chr02:017321643 0 W/17321643-17321643 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.653367;DP=4218;DP4=2213,1837,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.25201e-06;MQSB=0.851481;RPB=0.821454;SGB=35.7638;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.2:17326455 chr02:017326455 0 W/17326455-17326455 FN3695-S SNP C -> A AC=1;AN=190;BQB=0.751077;DP=2952;DP4=1555,1242,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21891e-07;MQSB=0.97869;RPB=0.988989;SGB=50.3161;VDB=0.368413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.2:17328128 chr02:017328128 0 W/17328128-17328128 FN2327 SNP G -> A AC=1;AN=192;BQB=0.991201;DP=4711;DP4=2094,2382,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00849077;MQB=0.0048161;MQSB=0.0181325;RPB=0.0549049;SGB=-15.333;VDB=0.177657;EFF=INTRON(MODIFIER||||371|LOC_Os02g29210|protein_coding|CODING|LOC_Os02g29210.1|9|1),INTRON(MODIFIER||||279|LOC_Os02g29210|protein_coding|CODING|LOC_Os02g29210.2|9|1),INTRON(MODIFIER||||118|LOC_Os02g29210|protein_coding|CODING|LOC_Os02g29210.3|8|1),INTRON(MODIFIER||||280|LOC_Os02g29210|protein_coding|CODING|LOC_Os02g29210.4|9|1) FN2423.SNP.2:17338363 chr02:017338363 0 W/17338363-17338363 FN2423 SNP C -> T AC=1;AN=200;BQB=0.377902;DP=2932;DP4=1178,1440,8,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000341064;MQB=2.46372e-06;MQSB=0.957995;RPB=0.771599;SGB=47.4799;VDB=0.482837;EFF=INTRON(MODIFIER||||265|LOC_Os02g29220|protein_coding|CODING|LOC_Os02g29220.1|2|1) FN718-S.SNP.2:17347490 chr02:017347490 0 W/17347490-17347490 FN718-S Single Base Substitution T-A INTERGENIC HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN718-S.SNP.2:17347491 chr02:017347491 0 W/17347491-17347491 FN718-S Single Base Substitution G-T INTERGENIC HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2791-S.SNP.2:17350160 chr02:017350160 0 W/17350160-17350160 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.989216;DP=4137;DP4=2008,1916,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.69033e-14;MQSB=0.967194;RPB=0.990962;SGB=-8.4797;VDB=0.340865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.2:17355468 chr02:017355468 0 W/17355468-17355468 FN2580-S SNP G -> T AC=1;AN=198;BQB=0.957242;DP=4317;DP4=1935,2160,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.30432e-08;MQSB=0.980887;RPB=0.9138;SGB=2.96892;VDB=0.944539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R210M|1636|LOC_Os02g29230|protein_coding|CODING|LOC_Os02g29230.1|1|1) FN3628-S.SNP.2:17357865 chr02:017357865 0 W/17357865-17357865 FN3628-S SNP A -> G AC=1;AN=190;BQB=0.8718;DP=2753;DP4=1366,1226,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27678e-08;MQSB=0.952142;RPB=0.870616;SGB=36.1006;VDB=0.752305;EFF=INTRON(MODIFIER||||1636|LOC_Os02g29230|protein_coding|CODING|LOC_Os02g29230.1|3|1) FN1232-S.SNP.2:17363058 chr02:017363058 0 W/17363058-17363058 FN1232-S Single Base Substitution C-G INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. W416-6-1.SNP.2:17366636 chr02:017366636 0 W/17366636-17366636 W416-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2564-S.SNP.2:17367130 chr02:017367130 0 W/17367130-17367130 FN2564-S SNP A -> G AC=1;AN=198;BQB=0.604774;DP=4195;DP4=2095,1806,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.06052e-06;MQSB=0.932567;RPB=0.848004;SGB=44.9538;VDB=0.864626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.2:17374452 chr02:017374452 0 W/17374452-17374452 FN1460-S Single Base Substitution T-C INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1299-S.SNP.2:17382526 chr02:017382526 0 W/17382526-17382526 FN1299-S Single Base Substitution C-T INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3312-S.SNP.2:17390621 chr02:017390621 0 W/17390621-17390621 FN3312-S SNP C -> A AC=1;AN=184;BQB=0.84584;DP=2895;DP4=1403,1404,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00345423;MQB=4.56428e-06;MQSB=0.999997;RPB=0.94584;SGB=49.835;VDB=0.894156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N76K|362|LOC_Os02g29270|protein_coding|CODING|LOC_Os02g29270.1|1|1) FN2767-S.SNP.2:17416133 chr02:017416133 0 W/17416133-17416133 FN2767-S SNP A -> G AC=1;AN=198;BQB=0.563985;DP=3698;DP4=1724,1793,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000270416;MQB=8.57962e-11;MQSB=0.126813;RPB=0.238296;SGB=54.5295;VDB=0.624965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.2:17430126 chr02:017430126 0 W/17430126-17430126 FN2179-S SNP G -> A AC=1;AN=168;BQB=0.0255784;DP=3480;DP4=1551,1879,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.23006e-11;MQSB=0.991449;RPB=0.529433;SGB=-41.2125;VDB=0.866687;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E176|475|LOC_Os02g29340|protein_coding|CODING|LOC_Os02g29340.1|2|1) FN2482.SNP.2:17435694 chr02:017435694 0 W/17435694-17435694 FN2482 SNP T -> A AC=1;AN=200;BQB=0.607846;DP=4804;DP4=2489,2087,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96609e-09;MQSB=0.997797;RPB=0.800467;SGB=58.8698;VDB=0.466569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.2:17441513 chr02:017441513 0 W/17441513-17441513 FN3331-S SNP C -> G AC=2;AN=184;BQB=0.999964;DP=2785;DP4=1183,1497,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.88924e-15;MQSB=0.881258;RPB=0.996849;SGB=112.047;VDB=0.748375;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.2:17442685 chr02:017442685 0 W/17442685-17442685 FN2439 SNP A -> G AC=2;AN=200;BQB=0.252902;DP=4681;DP4=2345,2076,10,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.93568e-13;MQSB=0.998683;RPB=0.795259;SGB=47.7211;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.2:17445380 chr02:017445380 0 W/17445380-17445380 FN3678-S SNP T -> C AC=1;AN=190;BQB=0.970813;DP=2838;DP4=1401,1334,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.28623e-09;MQSB=0.867787;RPB=0.460693;SGB=58.2031;VDB=0.481346;EFF=INTRON(MODIFIER||||386|LOC_Os02g29370|protein_coding|CODING|LOC_Os02g29370.1|1|1) FN2194-S.SNP.2:17447490 chr02:017447490 0 W/17447490-17447490 FN2194-S SNP T -> C AC=1;AN=190;BQB=0.655392;DP=4145;DP4=1824,1677,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000241255;MQB=3.03735e-08;MQSB=0.551284;RPB=0.645421;SGB=82.301;VDB=0.406568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V263A|1207|LOC_Os02g29380|protein_coding|CODING|LOC_Os02g29380.1|2|1) FN1356-S.SNP.2:17447746 chr02:017447746 0 W/17447746-17447746 FN1356-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3900-S.SNP.2:17459912 chr02:017459912 0 W/17459912-17459912 FN3900-S SNP C -> A AC=1;AN=158;BQB=0.487012;DP=2176;DP4=1366,688,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.12573e-07;MQSB=0.588443;RPB=0.740757;SGB=37.4429;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.2:17463805 chr02:017463805 0 W/17463805-17463805 FN1353-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2659-S.SNP.2:17464852 chr02:017464852 0 W/17464852-17464852 FN2659-S SNP A -> G AC=2;AN=200;BQB=0.85753;DP=5183;DP4=2710,2238,29,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.80455e-29;MQSB=0.955412;RPB=0.837752;SGB=210.84;VDB=0.0167718;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.2:17481969 chr02:017481969 0 W/17481969-17481969 FN-115 Single Base Substitution G-A INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2218-S.SNP.2:17498659 chr02:017498659 0 W/17498659-17498659 FN2218-S SNP T -> A AC=1;AN=190;BQB=0.830211;DP=4330;DP4=2275,1518,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.86976e-13;MQSB=0.985039;RPB=0.887688;SGB=14.9883;VDB=0.18298;EFF=INTRON(MODIFIER||||1316|LOC_Os02g29464|protein_coding|CODING|LOC_Os02g29464.1|13|1) FN-142.SNP.2:17501427 chr02:017501427 0 W/17501427-17501427 FN-142 Single Base Substitution G-A INTRON HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN-201.SNP.2:17509075 chr02:017509075 0 W/17509075-17509075 FN-201 Single Base Substitution A-G INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN3824-S.SNP.2:17514486 chr02:017514486 0 W/17514486-17514486 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.975992;DP=2603;DP4=1409,1087,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000124196;MQSB=0.0574707;RPB=0.866928;SGB=35.4339;VDB=0.167635;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A249|480|LOC_Os02g29480|protein_coding|CODING|LOC_Os02g29480.1|4|1) FN3332-S.SNP.2:17516345 chr02:017516345 0 W/17516345-17516345 FN3332-S SNP G -> A AC=2;AN=184;BQB=0.685769;DP=2579;DP4=972,1422,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.0537e-07;MQSB=0.018388;RPB=0.400969;SGB=103.004;VDB=0.0146022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.2:17517994 chr02:017517994 0 W/17517994-17517994 FN3751-S SNP T -> G AC=1;AN=190;BQB=0.751054;DP=2313;DP4=1131,1051,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39375e-05;MQSB=0.999732;RPB=0.790301;SGB=25.439;VDB=0.0369482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.2:17522702 chr02:017522702 0 W/17522702-17522702 FN1571-S Single Base Substitution G-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1184-S.SNP.2:17525466 chr02:017525466 0 W/17525466-17525466 FN1184-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN4066-S.SNP.2:17526731 chr02:017526731 0 W/17526731-17526731 FN4066-S SNP C -> T AC=2;AN=168;BQB=0.896579;DP=2660;DP4=1298,1256,9,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.13938e-13;MQSB=0.85656;RPB=0.582705;SGB=62.1945;VDB=0.224589;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.2:17533721 chr02:017533721 0 W/17533721-17533721 FN886-S Single Base Substitution C-G INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN-105.SNP.2:17537158 chr02:017537158 0 W/17537158-17537158 FN-105 Single Base Substitution G-A INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN3725-S.SNP.2:17544303 chr02:017544303 0 W/17544303-17544303 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.90707;DP=2468;DP4=1418,920,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.06914e-07;MQSB=0.454458;RPB=0.989031;SGB=36.1006;VDB=0.529202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.2:17555369 chr02:017555369 0 W/17555369-17555369 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.349844;DP=4312;DP4=2195,1878,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0264378;MQB=0.0507;MQSB=0.000202307;RPB=0.993749;SGB=-5.00654;VDB=0.560035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.2:17558991 chr02:017558991 0 W/17558991-17558991 FN3906-S SNP G -> A AC=1;AN=158;BQB=0.822654;DP=3001;DP4=1321,1590,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.43552e-06;MQSB=0.981308;RPB=0.995837;SGB=30.704;VDB=0.32634;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.2:17576388 chr02:017576388 0 W/17576388-17576388 FN1315-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN_N1-169-1.SNP.2:17588764 chr02:017588764 0 W/17588764-17588764 FN_N1-169-1 Single Base Substitution G-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN441-S.SNP.2:17593236 chr02:017593236 0 W/17593236-17593236 FN441-S Single Base Substitution C-T INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3564-S.SNP.2:17594269 chr02:017594269 0 W/17594269-17594269 FN3564-S SNP C -> G AC=2;AN=188;BQB=0.807263;DP=4273;DP4=2095,2033,29,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65958e-33;MQSB=0.441457;RPB=0.462284;SGB=257.97;VDB=0.782707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1590-S.SNP.2:17594977 chr02:017594977 0 W/17594977-17594977 FN1590-S Single Base Substitution G-A INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3343-S.SNP.2:17597828 chr02:017597828 0 W/17597828-17597828 FN3343-S SNP A -> G AC=2;AN=184;BQB=0.713248;DP=2882;DP4=1435,1348,12,16;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.549e-11;MQSB=0.611211;RPB=0.370894;SGB=88.5747;VDB=0.240576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.2:17599323 chr02:017599323 0 W/17599323-17599323 FN2646-S SNP G -> T AC=1;AN=200;BQB=0.950424;DP=5182;DP4=2360,2522,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97819e-12;MQSB=0.960958;RPB=0.982536;SGB=81.8956;VDB=0.555883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.2:17600540 chr02:017600540 0 W/17600540-17600540 FN3424-S SNP T -> C AC=2;AN=184;BQB=0.999653;DP=3092;DP4=1479,1443,17,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.26998e-22;MQSB=0.99863;RPB=0.729721;SGB=161.787;VDB=0.817211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.2:17603972 chr02:017603972 0 W/17603972-17603972 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.692441;DP=2387;DP4=1217,1125,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.78076e-07;MQSB=0.991704;RPB=0.97207;SGB=32.5467;VDB=0.696154;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.2:17605419 chr02:017605419 0 W/17605419-17605419 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN-95.SNP.2:17607508 chr02:017607508 0 W/17607508-17607508 FN-95 Single Base Substitution G-A INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1220-S.SNP.2:17607508 chr02:017607508 0 W/17607508-17607508 FN1220-S Single Base Substitution G-A INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-173.SNP.2:17609893 chr02:017609893 0 W/17609893-17609893 FN-173 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g29600 expressed protein SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN-237.SNP.2:17610446 chr02:017610446 0 W/17610446-17610446 FN-237 Single Base Substitution C-T INTRON HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN1210-S.SNP.2:17611469 chr02:017611469 0 W/17611469-17611469 FN1210-S Single Base Substitution C-T INTRON HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2491.SNP.2:17614889 chr02:017614889 0 W/17614889-17614889 FN2491 SNP T -> A AC=1;AN=200;BQB=0.148796;DP=5136;DP4=2395,2334,8,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00525701;MQB=0.0876932;MQSB=0;RPB=0.991283;SGB=21.6694;VDB=0.678335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.2:17622944 chr02:017622944 0 W/17622944-17622944 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.969434;DP=2766;DP4=1114,1546,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.84877e-06;MQSB=0.838175;RPB=0.962575;SGB=44.5415;VDB=0.843545;EFF=INTRON(MODIFIER||||1093|LOC_Os02g29630|protein_coding|CODING|LOC_Os02g29630.1|2|1) FN2194-S.SNP.2:17627901 chr02:017627901 0 W/17627901-17627901 FN2194-S SNP C -> A AC=1;AN=190;BQB=0.953008;DP=4839;DP4=2186,2256,28,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.8762e-22;MQSB=0.872412;RPB=0.923039;SGB=44.5119;VDB=0.0981592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G493V|651|LOC_Os02g29640|protein_coding|CODING|LOC_Os02g29640.1|4|1) FN1533-S.SNP.2:17630531 chr02:017630531 0 W/17630531-17630531 FN1533-S Single Base Substitution G-A INTRON HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN4025-S.SNP.2:17634418 chr02:017634418 0 W/17634418-17634418 FN4025-S SNP G -> A AC=1;AN=168;BQB=0.205106;DP=2676;DP4=1182,1337,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.58768e-05;MQSB=0.0778455;RPB=0.851582;SGB=2.75988;VDB=0.776945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.2:17634726 chr02:017634726 0 W/17634726-17634726 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.908138;DP=2774;DP4=1353,1324,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.14296e-06;MQSB=0.948675;RPB=0.538027;SGB=39.699;VDB=0.389245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.2:17636945 chr02:017636945 0 W/17636945-17636945 FN2653-S SNP C -> G AC=1;AN=200;BQB=0.661877;DP=4760;DP4=2421,2119,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60988e-12;MQSB=0.849846;RPB=0.430212;SGB=94.3471;VDB=0.99859;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.2:17648209 chr02:017648209 0 W/17648209-17648209 FN_827-1 Single Base Substitution C-G Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1458-S.SNP.2:17648381 chr02:017648381 0 W/17648381-17648381 FN1458-S Single Base Substitution C-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1461-S.SNP.2:17648568 chr02:017648568 0 W/17648568-17648568 FN1461-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2454.SNP.2:17650906 chr02:017650906 0 W/17650906-17650906 FN2454 SNP A -> G AC=1;AN=200;BQB=0.975855;DP=4653;DP4=2365,2104,5,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00193424;MQB=4.71329e-05;MQSB=0.635767;RPB=0.25338;SGB=33.0593;VDB=0.222637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.2:17651311 chr02:017651311 0 W/17651311-17651311 FN-268 Single Base Substitution G-A INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3708-S.SNP.2:17652299 chr02:017652299 0 W/17652299-17652299 FN3708-S SNP T -> C AC=1;AN=190;BQB=0.888445;DP=3004;DP4=1539,1380,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00133156;MQB=0.00411449;MQSB=0.992583;RPB=0.375935;SGB=18.3316;VDB=0.801559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.2:17652990 chr02:017652990 0 W/17652990-17652990 FN1642-S Single Base Substitution C-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1662-S.SNP.2:17653375 chr02:017653375 0 W/17653375-17653375 FN1662-S Single Base Substitution C-T INTERGENIC Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2563-S.SNP.2:17653375 chr02:017653375 0 W/17653375-17653375 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.996768;DP=3778;DP4=1769,1849,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.93093e-11;MQSB=0.697211;RPB=0.813383;SGB=54.5295;VDB=0.0713684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.2:17653375 chr02:017653375 0 W/17653375-17653375 FN3444-S SNP C -> T AC=2;AN=184;BQB=0.874151;DP=2979;DP4=1612,1264,17,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.28968e-14;MQSB=0.819992;RPB=0.863403;SGB=56.0583;VDB=0.308498;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.2:17654095 chr02:017654095 0 W/17654095-17654095 FN3653-S SNP C -> G AC=1;AN=190;BQB=0.956791;DP=2808;DP4=1485,1226,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000259723;MQSB=0.944748;RPB=0.402563;SGB=30.8803;VDB=0.131006;EFF=INTERGENIC(MODIFIER||||||||||1) FN-314.SNP.2:17659713 chr02:017659713 0 W/17659713-17659713 FN-314 Single Base Substitution C-A INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN469-S.SNP.2:17662172 chr02:017662172 0 W/17662172-17662172 FN469-S Single Base Substitution A-G INTRON HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN3424-S.SNP.2:17667435 chr02:017667435 0 W/17667435-17667435 FN3424-S SNP G -> A AC=2;AN=184;BQB=0.27165;DP=3026;DP4=1376,1546,17,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.79633e-14;MQSB=0.926363;RPB=0.647159;SGB=116.569;VDB=0.604338;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T39|644|LOC_Os02g29680|protein_coding|CODING|LOC_Os02g29680.1|2|1) FN3424-S.SNP.2:17667436 chr02:017667436 0 W/17667436-17667436 FN3424-S SNP G -> A AC=2;AN=184;BQB=0.974642;DP=3009;DP4=1360,1560,15,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.19985e-14;MQSB=0.930052;RPB=0.395008;SGB=98.4821;VDB=0.397316;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T39I|644|LOC_Os02g29680|protein_coding|CODING|LOC_Os02g29680.1|2|1) FN2221-S.SNP.2:17671685 chr02:017671685 0 W/17671685-17671685 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.586127;DP=5407;DP4=2662,2391,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.32519e-18;MQSB=0.92964;RPB=0.325366;SGB=103.624;VDB=0.503515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.2:17672441 chr02:017672441 0 W/17672441-17672441 FN3670-S SNP G -> T AC=1;AN=190;BQB=0.346644;DP=2664;DP4=1207,1291,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.6414e-09;MQSB=0.60421;RPB=0.939157;SGB=5.66499;VDB=0.923524;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.2:17675689 chr02:017675689 0 W/17675689-17675689 FN4105-S SNP G -> C AC=1;AN=182;BQB=0.971268;DP=2845;DP4=1531,1227,1,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.49854e-06;MQSB=0.93078;RPB=0.909374;SGB=44.1115;VDB=0.791805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.2:17676786 chr02:017676786 0 W/17676786-17676786 FN2715-S SNP G -> C AC=2;AN=200;BQB=0.918284;DP=4972;DP4=2334,2385,9,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.00358e-16;MQSB=0.782803;RPB=0.505942;SGB=132.552;VDB=0.62625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aGg|T283R|424|LOC_Os02g29720|protein_coding|CODING|LOC_Os02g29720.1|3|1) FN755-S.SNP.2:17677297 chr02:017677297 0 W/17677297-17677297 FN755-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g29720 cytochrome P450, putative, expressed SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN525-S.SNP.2:17679326 chr02:017679326 0 W/17679326-17679326 FN525-S Single Base Substitution A-C INTERGENIC HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2119-S.SNP.2:17682859 chr02:017682859 0 W/17682859-17682859 FN2119-S SNP G -> A AC=1;AN=168;BQB=0.947592;DP=3372;DP4=1803,1517,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.40022e-08;MQSB=0.994734;RPB=0.289181;SGB=-37.7974;VDB=0.249373;EFF=INTRON(MODIFIER||||1181|LOC_Os02g29730|protein_coding|CODING|LOC_Os02g29730.1|5|1) FN3652-S.SNP.2:17688966 chr02:017688966 0 W/17688966-17688966 FN3652-S SNP G -> A AC=2;AN=190;BQB=0.934322;DP=2808;DP4=1251,1402,17,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.63102e-14;MQSB=0.740886;RPB=0.958939;SGB=90.0802;VDB=0.843457;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S419|639|LOC_Os02g29740|protein_coding|CODING|LOC_Os02g29740.1|7|1) FN2765-S.SNP.2:17703887 chr02:017703887 0 W/17703887-17703887 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.991957;DP=4199;DP4=1979,2013,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.3558e-12;MQSB=0.989024;RPB=0.327388;SGB=90.9049;VDB=0.273301;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.2:17704994 chr02:017704994 0 W/17704994-17704994 FN859-S Single Base Substitution C-A INTRON HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN-161.SNP.2:17705090 chr02:017705090 0 W/17705090-17705090 FN-161 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g29760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. W577-3-1.SNP.2:17705915 chr02:017705915 0 W/17705915-17705915 W577-3-1 Single Base Substitution C-T INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. W23-2-1.SNP.2:17707414 chr02:017707414 0 W/17707414-17707414 W23-2-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g29760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2758-S.SNP.2:17711769 chr02:017711769 0 W/17711769-17711769 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.567147;DP=5033;DP4=2289,2520,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21319e-11;MQSB=0.927611;RPB=0.970753;SGB=86.5007;VDB=0.227621;EFF=SPLICE_SITE_REGION(LOW||||1407|LOC_Os02g29760|protein_coding|CODING|LOC_Os02g29760.1|14|1),SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L956|1407|LOC_Os02g29760|protein_coding|CODING|LOC_Os02g29760.1|14|1) FN1535-S.SNP.2:17723697 chr02:017723697 0 W/17723697-17723697 FN1535-S Single Base Substitution G-A INTRON HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1688-S.SNP.2:17724778 chr02:017724778 0 W/17724778-17724778 FN1688-S SNP G -> A AC=2;AN=188;BQB=0.724637;DP=2480;DP4=990,1445,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.82495e-14;MQSB=0.91142;RPB=0.390909;SGB=74.9605;VDB=0.0629862;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K700|959|LOC_Os02g29780|protein_coding|CODING|LOC_Os02g29780.1|12|1) FN1764-S.SNP.2:17725171 chr02:017725171 0 W/17725171-17725171 FN1764-S SNP G -> A AC=1;AN=188;BQB=0.25695;DP=2262;DP4=1120,1102,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.54991e-06;MQSB=0.93449;RPB=0.773954;SGB=-36.4511;VDB=0.932218;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L831|959|LOC_Os02g29780|protein_coding|CODING|LOC_Os02g29780.1|12|1) FN3807-S.SNP.2:17729829 chr02:017729829 0 W/17729829-17729829 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.668307;DP=2496;DP4=1055,1358,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00280449;MQB=0.0118315;MQSB=0.566314;RPB=0.901133;SGB=21.8853;VDB=0.224157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.2:17736733 chr02:017736733 0 W/17736733-17736733 FN2423 SNP T -> C AC=1;AN=200;BQB=0.762964;DP=5049;DP4=2162,2311,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16414e-09;MQSB=0.998999;RPB=0.869245;SGB=-37.2897;VDB=0.55876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.2:17736856 chr02:017736856 0 W/17736856-17736856 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.169816;DP=4577;DP4=2276,2045,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.49128e-08;MQSB=0.98627;RPB=0.502853;SGB=9.3494;VDB=0.34822;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.2:17738569 chr02:017738569 0 W/17738569-17738569 FN-68 Single Base Substitution G-T INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2670-S.SNP.2:17739096 chr02:017739096 0 W/17739096-17739096 FN2670-S SNP A -> T AC=2;AN=200;BQB=0.069652;DP=5152;DP4=2541,2287,44,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=0;MQSB=0.996447;RPB=0.923245;SGB=232.744;VDB=0.267032;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.2:17743395 chr02:017743395 0 W/17743395-17743395 FN856-S Single Base Substitution A-G INTRON HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN3778-S.SNP.2:17746307 chr02:017746307 0 W/17746307-17746307 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.988392;DP=2735;DP4=1329,1332,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04495e-08;MQSB=0.999628;RPB=0.640139;SGB=62.7569;VDB=0.106241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E139K|378|LOC_Os02g29850|protein_coding|CODING|LOC_Os02g29850.1|2|1) FN185-2_3_4.SNP.2:17747177 chr02:017747177 0 W/17747177-17747177 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.39113;DP=3100;DP4=1453,1572,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.31196e-10;MQSB=0.964794;RPB=0.501281;SGB=60.7873;VDB=0.131345;EFF=INTRON(MODIFIER||||378|LOC_Os02g29850|protein_coding|CODING|LOC_Os02g29850.1|3|1) FN3883-S.SNP.2:17747822 chr02:017747822 0 W/17747822-17747822 FN3883-S SNP T -> A AC=1;AN=158;BQB=0.865264;DP=2377;DP4=1173,1085,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.68159e-10;MQSB=0.999991;RPB=0.513639;SGB=44.1818;VDB=0.293362;EFF=INTRON(MODIFIER||||378|LOC_Os02g29850|protein_coding|CODING|LOC_Os02g29850.1|3|1) FN3699-S.SNP.2:17751720 chr02:017751720 0 W/17751720-17751720 FN3699-S SNP C -> T AC=1;AN=190;BQB=0.999971;DP=2807;DP4=1342,1379,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.72339e-09;MQSB=0.966125;RPB=0.957978;SGB=53.6492;VDB=0.744065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.2:17751750 chr02:017751750 0 W/17751750-17751750 FN2686-S SNP C -> T AC=1;AN=200;BQB=0.45822;DP=4791;DP4=2197,2301,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.67212e-05;MQSB=0.776169;RPB=0.83183;SGB=8.64371;VDB=0.788506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.2:17753197 chr02:017753197 0 W/17753197-17753197 FN3510-S SNP A -> G AC=1;AN=188;BQB=0.988251;DP=2793;DP4=1391,1280,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40898e-08;MQSB=0.963313;RPB=0.643077;SGB=62.6088;VDB=0.426105;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.2:17754896 chr02:017754896 0 W/17754896-17754896 FN1690-S SNP G -> A AC=1;AN=188;BQB=0.0152399;DP=2335;DP4=970,1335,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0159886;MQSB=0.999999;RPB=0.963113;SGB=-54.619;VDB=0.417694;EFF=INTRON(MODIFIER||||70|LOC_Os02g29860|protein_coding|CODING|LOC_Os02g29860.1|1|1) FN2195-S.SNP.2:17755389 chr02:017755389 0 W/17755389-17755389 FN2195-S SNP G -> A AC=1;AN=190;BQB=0.102781;DP=2763;DP4=820,1506,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000361925;MQB=0.000140631;MQSB=5.24086e-41;RPB=0.192761;SGB=-34.54;VDB=0.507997;EFF=INTRON(MODIFIER||||70|LOC_Os02g29860|protein_coding|CODING|LOC_Os02g29860.1|1|1) FN2572-S.SNP.2:17756497 chr02:017756497 0 W/17756497-17756497 FN2572-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1634-S.SNP.2:17756787 chr02:017756787 0 W/17756787-17756787 FN1634-S Single Base Substitution C-T INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1206-S.SNP.2:17764226 chr02:017764226 0 W/17764226-17764226 FN1206-S Single Base Substitution A-C INTRON HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN4144-S.SNP.2:17764998 chr02:017764998 0 W/17764998-17764998 FN4144-S SNP T -> C AC=1;AN=170;BQB=0.703413;DP=2556;DP4=1196,1307,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.09381e-07;MQSB=0.999985;RPB=0.728261;SGB=12.556;VDB=0.914647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K574R|752|LOC_Os02g29870|protein_coding|CODING|LOC_Os02g29870.1|7|1) FN3490-S.SNP.2:17775595 chr02:017775595 0 W/17775595-17775595 FN3490-S SNP A -> T AC=2;AN=184;BQB=0.742607;DP=2733;DP4=1340,1307,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.53264e-13;MQSB=0.990446;RPB=0.426919;SGB=40.9276;VDB=0.0084071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.2:17775596 chr02:017775596 0 W/17775596-17775596 FN3490-S SNP A -> T AC=2;AN=184;BQB=0.999914;DP=2729;DP4=1324,1306,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.38033e-13;MQSB=0.975702;RPB=0.45995;SGB=40.9276;VDB=0.01754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.2:17775597 chr02:017775597 0 W/17775597-17775597 FN3490-S SNP G -> T AC=2;AN=184;BQB=0.960322;DP=2715;DP4=1313,1298,11,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.52114e-14;MQSB=0.974847;RPB=0.773166;SGB=63.9222;VDB=0.00723504;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.2:17777627 chr02:017777627 0 W/17777627-17777627 FN1302-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2551-S.SNP.2:17779364 chr02:017779364 0 W/17779364-17779364 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.836934;DP=3663;DP4=1622,1807,17,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000273;MQB=1.65111e-13;MQSB=0.696977;RPB=0.933077;SGB=76.1002;VDB=0.941986;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.2:17780860 chr02:017780860 0 W/17780860-17780860 FN1068-S Single Base Substitution C-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2146-S.SNP.2:17784504 chr02:017784504 0 W/17784504-17784504 FN2146-S SNP C -> A AC=1;AN=168;BQB=0.116974;DP=3603;DP4=1778,1790,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00059897;MQSB=0.821236;RPB=0.856956;SGB=-16.665;VDB=0.363652;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P563Q|707|LOC_Os02g29890|protein_coding|CODING|LOC_Os02g29890.1|2|1) FN3460-S.SNP.2:17787770 chr02:017787770 0 W/17787770-17787770 FN3460-S SNP G -> A AC=1;AN=184;BQB=0.992899;DP=2820;DP4=1178,1559,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.96998e-06;MQSB=0.966742;RPB=0.58665;SGB=35.1773;VDB=0.529033;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.2:17788519 chr02:017788519 0 W/17788519-17788519 FN4043-S SNP C -> G AC=1;AN=168;BQB=0.946053;DP=2597;DP4=1351,1106,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=6.48404e-07;MQSB=2.1669e-07;RPB=0.999336;SGB=69.8961;VDB=0.325481;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.2:17791480 chr02:017791480 0 W/17791480-17791480 FN561-S Single Base Substitution T-G INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2357.SNP.2:17794607 chr02:017794607 0 W/17794607-17794607 FN2357 SNP A -> T AC=2;AN=192;BQB=0.00792881;DP=4733;DP4=2126,2254,33,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.3952e-28;MQSB=0.0874742;RPB=0.885575;SGB=225.715;VDB=0.421115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.2:17798782 chr02:017798782 0 W/17798782-17798782 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.995782;DP=2777;DP4=1523,1169,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.30841e-06;MQSB=0.886902;RPB=0.398505;SGB=44.5415;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.2:17809934 chr02:017809934 0 W/17809934-17809934 FN1045-S Single Base Substitution C-A INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3707-S.SNP.2:17838502 chr02:017838502 0 W/17838502-17838502 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.959779;DP=2857;DP4=1335,1421,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.000350018;MQB=2.26933e-05;MQSB=0.963866;RPB=0.207391;SGB=28.7675;VDB=0.348183;EFF=INTRON(MODIFIER||||655|LOC_Os02g30020|protein_coding|CODING|LOC_Os02g30020.1|7|1) FN2791-S.SNP.2:17847098 chr02:017847098 0 W/17847098-17847098 FN2791-S SNP A -> T AC=1;AN=198;BQB=0.950728;DP=4504;DP4=2044,2173,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.91351e-08;MQSB=0.621135;RPB=0.929036;SGB=65.3149;VDB=0.405922;EFF=INTRON(MODIFIER||||123|LOC_Os02g30050|protein_coding|CODING|LOC_Os02g30050.1|3|1) FN886-S.SNP.2:17865253 chr02:017865253 0 W/17865253-17865253 FN886-S Single Base Substitution A-G INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN3829-S.SNP.2:17875107 chr02:017875107 0 W/17875107-17875107 FN3829-S SNP C -> A AC=1;AN=190;BQB=0.195671;DP=2133;DP4=631,1321,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000234076;MQSB=0.00010143;RPB=0.998403;SGB=5.66499;VDB=0.151375;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F407L|524|LOC_Os02g30100|protein_coding|CODING|LOC_Os02g30100.1|3|1) FN1646-S.SNP.2:17877305 chr02:017877305 0 W/17877305-17877305 FN1646-S Single Base Substitution T-G INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1732-S.SNP.2:17877409 chr02:017877409 0 W/17877409-17877409 FN1732-S SNP C -> T AC=2;AN=188;BQB=0.617082;DP=3861;DP4=1802,2006,18,20;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=3.68681e-12;MQSB=0.278148;RPB=0.976198;SGB=-3.04727;VDB=0.903354;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.2:17879107 chr02:017879107 0 W/17879107-17879107 FN354-S Single Base Substitution A-C INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN4173-S.SNP.2:17905800 chr02:017905800 0 W/17905800-17905800 FN4173-S SNP A -> T AC=1;AN=170;BQB=0.728256;DP=2831;DP4=1434,1267,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.64014e-08;MQSB=0.99639;RPB=0.71488;SGB=22.3266;VDB=0.442081;EFF=INTRON(MODIFIER||||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.1|1|1),INTRON(MODIFIER||||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.2|1|1) FN3562-S.SNP.2:17906736 chr02:017906736 0 W/17906736-17906736 FN3562-S SNP G -> T AC=1;AN=188;BQB=0.982101;DP=2615;DP4=1283,1230,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.98411e-08;MQSB=0.999573;RPB=0.827126;SGB=35.9843;VDB=0.338137;EFF=UTR_3_PRIME(MODIFIER||481||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.2|3|1),UTR_3_PRIME(MODIFIER||481||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.1|3|1) FN2545-S.SNP.2:17908175 chr02:017908175 0 W/17908175-17908175 FN2545-S SNP C -> G AC=2;AN=198;BQB=0.865436;DP=4171;DP4=2098,1836,16,17;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=2.10655e-11;MQSB=0.927333;RPB=0.468438;SGB=70.8662;VDB=0.556083;EFF=UTR_3_PRIME(MODIFIER||1920||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.2|3|1),UTR_3_PRIME(MODIFIER||1920||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.1|3|1) FN1680-S.SNP.2:17908923 chr02:017908923 0 W/17908923-17908923 FN1680-S SNP G -> T AC=1;AN=188;BQB=0.812333;DP=3457;DP4=1775,1646,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26165e-13;MQSB=0.965232;RPB=0.228065;SGB=85.5904;VDB=0.703548;EFF=UTR_3_PRIME(MODIFIER||2668||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.1|3|1),UTR_3_PRIME(MODIFIER||2668||286|LOC_Os02g30140|protein_coding|CODING|LOC_Os02g30140.2|4|1) FN831-S.SNP.2:17911646 chr02:017911646 0 W/17911646-17911646 FN831-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g30150 disease resistance protein, putative, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN1265-S.SNP.2:17919865 chr02:017919865 0 W/17919865-17919865 FN1265-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g30160 retrotransposon protein, putative, unclassified, expressed SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN467-S.SNP.2:17923325 chr02:017923325 0 W/17923325-17923325 FN467-S Single Base Substitution G-A INTRON HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2356.SNP.2:17927671 chr02:017927671 0 W/17927671-17927671 FN2356 SNP C -> T AC=1;AN=192;BQB=0.729663;DP=3919;DP4=1695,2040,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0;MQB=0.00156945;MQSB=0.553486;RPB=0.999148;SGB=50.4731;VDB=0.480398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.2:17929935 chr02:017929935 0 W/17929935-17929935 FN2653-S SNP C -> T AC=2;AN=200;BQB=0.94868;DP=4888;DP4=2329,2245,21,20;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0;MQB=5.18827e-11;MQSB=0.00692789;RPB=0.725652;SGB=137.609;VDB=0.632005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.2:17937894 chr02:017937894 0 W/17937894-17937894 FN2686-S SNP G -> A AC=1;AN=200;BQB=0.872964;DP=4961;DP4=2086,2536,3,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.000139608;MQSB=0.999955;RPB=0.935021;SGB=40.4492;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.2:17972005 chr02:017972005 0 W/17972005-17972005 FN-146 Single Base Substitution T-A INTERGENIC HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1571-S.SNP.2:17974736 chr02:017974736 0 W/17974736-17974736 FN1571-S Single Base Substitution G-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-171.SNP.2:17994060 chr02:017994060 0 W/17994060-17994060 FN-171 Single Base Substitution A-C INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2572-S.SNP.2:17994326 chr02:017994326 0 W/17994326-17994326 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.938485;DP=4588;DP4=2405,1838,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.25442e-06;MQSB=0.000105463;RPB=0.549367;SGB=76.1002;VDB=0.322302;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.2:18002661 chr02:018002661 0 W/18002661-18002661 FN_815-4-1 Single Base Substitution C-T HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3471-S.SNP.2:18003648 chr02:018003648 0 W/18003648-18003648 FN3471-S SNP C -> T AC=1;AN=184;BQB=0.968082;DP=3149;DP4=1595,1463,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.18561e-10;MQSB=0.992878;RPB=0.700268;SGB=60.4004;VDB=0.349823;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A114|356|LOC_Os02g30270|protein_coding|CODING|LOC_Os02g30270.1|1|1) FN3981-S.SNP.2:18005318 chr02:018005318 0 W/18005318-18005318 FN3981-S SNP G -> C AC=1;AN=168;BQB=0.995778;DP=2025;DP4=826,1104,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.35093e-06;MQSB=0.638276;RPB=0.489681;SGB=43.3113;VDB=0.0843875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A52P|403|LOC_Os02g30280|protein_coding|CODING|LOC_Os02g30280.1|1|1) FN459-S.SNP.2:18009544 chr02:018009544 0 W/18009544-18009544 FN459-S Single Base Substitution A-T INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2422.SNP.2:18010513 chr02:018010513 0 W/18010513-18010513 FN2422 SNP G -> T AC=2;AN=200;BQB=0.808475;DP=4374;DP4=1899,2159,23,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.77788e-23;MQSB=0.0294508;RPB=0.948592;SGB=197.025;VDB=0.319969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.2:18013012 chr02:018013012 0 W/18013012-18013012 FN3448-S SNP T -> C AC=1;AN=184;BQB=0.998922;DP=3107;DP4=1754,1242,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.71731e-11;MQSB=0.982397;RPB=0.328426;SGB=30.8405;VDB=0.758511;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G1056|1386|LOC_Os02g30290|protein_coding|CODING|LOC_Os02g30290.1|10|1) FN1642-S.SNP.2:18013481 chr02:018013481 0 W/18013481-18013481 FN1642-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g30290 transposon protein, putative, unclassified, expressed SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2708-S.SNP.2:18024864 chr02:018024864 0 W/18024864-18024864 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.99031;DP=4314;DP4=2193,1815,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.15874e-11;MQSB=0.284546;RPB=0.811219;SGB=95.7111;VDB=0.665795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.2:18029261 chr02:018029261 0 W/18029261-18029261 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.750683;DP=2871;DP4=1460,1277,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000530989;MQSB=0.141058;RPB=0.8671;SGB=10.8904;VDB=0.117011;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.2:18031443 chr02:018031443 0 W/18031443-18031443 FN448-S Single Base Substitution C-T INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2252-S.SNP.2:18041619 chr02:018041619 0 W/18041619-18041619 FN2252-S SNP G -> A AC=1;AN=190;BQB=0.364775;DP=4274;DP4=2144,1898,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0397754;MQB=0.000131131;MQSB=0.0823968;RPB=0.47486;SGB=90.0802;VDB=0.256667;EFF=INTRON(MODIFIER||||421|LOC_Os02g30310|protein_coding|CODING|LOC_Os02g30310.1|3|1),INTRON(MODIFIER||||401|LOC_Os02g30310|protein_coding|CODING|LOC_Os02g30310.2|2|1),INTRON(MODIFIER||||396|LOC_Os02g30310|protein_coding|CODING|LOC_Os02g30310.3|3|1) FN522-S.SNP.2:18042347 chr02:018042347 0 W/18042347-18042347 FN522-S Single Base Substitution G-C INTRON HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN-362.SNP.2:18046315 chr02:018046315 0 W/18046315-18046315 FN-362 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g30310 ThiF family domain containing protein, putative, expressed SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1373-S.SNP.2:18046315 chr02:018046315 0 W/18046315-18046315 FN1373-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os02g30310 ThiF family domain containing protein, putative, expressed SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1214-S.SNP.2:18052814 chr02:018052814 0 W/18052814-18052814 FN1214-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1658-S.SNP.2:18057874 chr02:018057874 0 W/18057874-18057874 FN1658-S SNP C -> G AC=1;AN=188;BQB=0.567278;DP=4119;DP4=2195,1894,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.34242e-08;MQSB=0.519266;RPB=0.620101;SGB=-14.9998;VDB=0.52348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.2:18058928 chr02:018058928 0 W/18058928-18058928 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.62984;DP=2645;DP4=1112,1409,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.000378072;MQB=0.000145273;MQSB=0.431597;RPB=0.914712;SGB=72.5245;VDB=0.318289;EFF=UTR_5_PRIME(MODIFIER||264||120|LOC_Os02g30320|protein_coding|CODING|LOC_Os02g30320.1|1|1) FN3347-S.SNP.2:18065964 chr02:018065964 0 W/18065964-18065964 FN3347-S SNP C -> A AC=1;AN=184;BQB=0.847589;DP=2955;DP4=1440,1399,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.60197e-05;MQSB=0.193524;RPB=0.442164;SGB=42.7914;VDB=0.83091;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.2:18067906 chr02:018067906 0 W/18067906-18067906 FN3990-S SNP G -> C AC=1;AN=168;BQB=0.904419;DP=2279;DP4=1094,1068,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0;MQB=0.0230362;MQSB=0.000455658;RPB=0.581324;SGB=61.0344;VDB=0.946541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.2:18073742 chr02:018073742 0 W/18073742-18073742 FN-256 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2674-S.SNP.2:18075229 chr02:018075229 0 W/18075229-18075229 FN2674-S SNP G -> A AC=2;AN=200;BQB=0.945073;DP=4417;DP4=2053,2095,20,15;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=6.48643e-13;MQSB=0.124906;RPB=0.346258;SGB=76.378;VDB=0.967488;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.2:18089974 chr02:018089974 0 W/18089974-18089974 FN-240 Single Base Substitution G-A INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2687-S.SNP.2:18092046 chr02:018092046 0 W/18092046-18092046 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.495648;DP=4057;DP4=2064,1676,6,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.6061e-05;MQSB=0.537157;RPB=0.945758;SGB=26.6347;VDB=0.467796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A32S|196|LOC_Os02g30380|protein_coding|CODING|LOC_Os02g30380.1|1|1) FN1583-S.SNP.2:18105718 chr02:018105718 0 W/18105718-18105718 FN1583-S Single Base Substitution C-A INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1243-S.SNP.2:18110999 chr02:018110999 0 W/18110999-18110999 FN1243-S Single Base Substitution G-C INTRON HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1514-S.SNP.2:18112816 chr02:018112816 0 W/18112816-18112816 FN1514-S Single Base Substitution A-G INTRON Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2681-S.SNP.2:18117385 chr02:018117385 0 W/18117385-18117385 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.125178;DP=4894;DP4=2328,2260,13,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000722265;MQSB=0.57331;RPB=0.0960005;SGB=76.3213;VDB=0.882479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.2:18131826 chr02:018131826 0 W/18131826-18131826 FN1214-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN3670-S.SNP.2:18226529 chr02:018226529 0 W/18226529-18226529 FN3670-S SNP A -> T AC=1;AN=190;BQB=0.778071;DP=2989;DP4=1408,1417,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=6.8245e-05;MQSB=2.11113e-06;RPB=0.990126;SGB=10.8904;VDB=0.382624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.2:18231471 chr02:018231471 0 W/18231471-18231471 FN1749-S SNP T -> A AC=2;AN=188;BQB=0.915222;DP=3702;DP4=1838,1769,29,28;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=5.22221e-22;MQSB=0.280662;RPB=0.648501;SGB=115.81;VDB=0.502209;EFF=UTR_3_PRIME(MODIFIER||295||101|LOC_Os02g30624|protein_coding|CODING|LOC_Os02g30624.2|3|1),UTR_3_PRIME(MODIFIER||1428||734|LOC_Os02g30620|protein_coding|CODING|LOC_Os02g30620.1|3|1) FN3675-S.SNP.2:18231485 chr02:018231485 0 W/18231485-18231485 FN3675-S SNP G -> A AC=2;AN=190;BQB=0.83702;DP=2853;DP4=1239,1484,10,10;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0;MQB=0.0147358;MQSB=1.13943e-06;RPB=0.924114;SGB=60.9777;VDB=0.105516;EFF=UTR_3_PRIME(MODIFIER||281||101|LOC_Os02g30624|protein_coding|CODING|LOC_Os02g30624.2|3|1) FN1749-S.SNP.2:18233546 chr02:018233546 0 W/18233546-18233546 FN1749-S SNP G -> T AC=2;AN=188;BQB=0.342318;DP=2515;DP4=1179,1307,16,6;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0;MQB=0.000436979;MQSB=0.730421;RPB=0.722498;SGB=14.798;VDB=0.566497;EFF=INTRON(MODIFIER||||101|LOC_Os02g30624|protein_coding|CODING|LOC_Os02g30624.1|1|1),INTRON(MODIFIER||||101|LOC_Os02g30624|protein_coding|CODING|LOC_Os02g30624.2|1|1) FN872-S.SNP.2:18286287 chr02:018286287 0 W/18286287-18286287 FN872-S Single Base Substitution A-C INTRON HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-133.SNP.2:18292133 chr02:018292133 0 W/18292133-18292133 FN-133 Single Base Substitution T-G INTRON HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-133.SNP.2:18300434 chr02:018300434 0 W/18300434-18300434 FN-133 Single Base Substitution G-T INTRON HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. W278-3-1.SNP.2:18300758 chr02:018300758 0 W/18300758-18300758 W278-3-1 Single Base Substitution C-T INTRON HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN590-S.SNP.2:18305894 chr02:018305894 0 W/18305894-18305894 FN590-S Single Base Substitution G-A INTRON HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN2408.SNP.2:18307474 chr02:018307474 0 W/18307474-18307474 FN2408 SNP T -> A AC=1;AN=200;BQB=0.67277;DP=2169;DP4=729,1249,4,5;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0;MQB=0.707712;MQSB=0.232985;RPB=0.214357;SGB=22.2439;VDB=0.078783;EFF=INTRON(MODIFIER||||395|LOC_Os02g30714|protein_coding|CODING|LOC_Os02g30714.1|3|1) FN2456.SNP.2:18310657 chr02:018310657 0 W/18310657-18310657 FN2456 SNP G -> A AC=2;AN=200;BQB=0.953757;DP=3705;DP4=1742,1717,7,15;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0;MQB=0.00181627;MQSB=0.930353;RPB=0.705881;SGB=95.7111;VDB=0.160837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1131-S.SNP.2:18324265 chr02:018324265 0 W/18324265-18324265 FN1131-S Single Base Substitution T-A INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN-251.SNP.2:18330834 chr02:018330834 0 W/18330834-18330834 FN-251 Single Base Substitution G-A INTRON HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN3887-S.SNP.2:18331555 chr02:018331555 0 W/18331555-18331555 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.959459;DP=1887;DP4=586,1212,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.0540541;MQB=0.829558;MQSB=9.58985e-08;RPB=0.696138;SGB=34.0735;VDB=0.824937;EFF=INTRON(MODIFIER||||629|LOC_Os02g30770|protein_coding|CODING|LOC_Os02g30770.1|4|1) FN406-S.SNP.2:18351510 chr02:018351510 0 W/18351510-18351510 FN406-S Single Base Substitution A-G INTRON HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN2160-S.SNP.2:18355254 chr02:018355254 0 W/18355254-18355254 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.223199;DP=4155;DP4=2076,2023,13,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.05375e-17;MQSB=0.954811;RPB=0.340179;SGB=28.5146;VDB=0.107694;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y512|2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|12|1) FN2160-S.SNP.2:18355255 chr02:018355255 0 W/18355255-18355255 FN2160-S SNP T -> A AC=2;AN=168;BQB=0.0423498;DP=4145;DP4=2061,2026,14,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.70512e-16;MQSB=0.959011;RPB=0.77528;SGB=-48.0427;VDB=0.0596408;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S513T|2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|12|1) FN4064-S.SNP.2:18355969 chr02:018355969 0 W/18355969-18355969 FN4064-S SNP C -> A AC=1;AN=168;BQB=0.320092;DP=2540;DP4=1256,1205,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.0429958;MQSB=0.699598;RPB=0.341046;SGB=34.4498;VDB=0.202829;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V652|2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|14|1) FN3826-S.SNP.2:18356930 chr02:018356930 0 W/18356930-18356930 FN3826-S SNP G -> T AC=1;AN=190;BQB=0.922274;DP=2529;DP4=1228,1194,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.002774;MQSB=0.00990593;RPB=0.937211;SGB=30.8803;VDB=0.942381;EFF=INTRON(MODIFIER||||2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|15|1) FN962-S.SNP.2:18357447 chr02:018357447 0 W/18357447-18357447 FN962-S Single Base Substitution A-T INTRON HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4304-S.SNP.2:18361060 chr02:018361060 0 W/18361060-18361060 FN4304-S SNP C -> T AC=1;AN=170;BQB=0.949817;DP=2621;DP4=1204,1348,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000381534;MQB=7.53227e-07;MQSB=0.978385;RPB=0.884687;SGB=31.4354;VDB=0.254982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1133W|2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|26|1) FN3733-S.SNP.2:18367274 chr02:018367274 0 W/18367274-18367274 FN3733-S SNP A -> T AC=1;AN=190;BQB=0.905109;DP=2725;DP4=1250,1369,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000206045;MQSB=0.8162;RPB=0.796356;SGB=36.1006;VDB=0.808177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H1947L|2286|LOC_Os02g30800|protein_coding|CODING|LOC_Os02g30800.1|44|1) W279-4-1.SNP.2:18373163 chr02:018373163 0 W/18373163-18373163 W279-4-1 Single Base Substitution C-G INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN-15.SNP.2:18388203 chr02:018388203 0 W/18388203-18388203 FN-15 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os02g30840 RNA pseudouridine synthase, putative, expressed SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN831-S.SNP.2:18390126 chr02:018390126 0 W/18390126-18390126 FN831-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN1433-S.SNP.2:18394737 chr02:018394737 0 W/18394737-18394737 FN1433-S Single Base Substitution A-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2286.SNP.2:18397485 chr02:018397485 0 W/18397485-18397485 FN2286 SNP A -> C AC=2;AN=192;BQB=0.806636;DP=5010;DP4=2379,2239,20,18;HOB=0.0206163;ICB=0.494846;MQ=37;MQ0F=0;MQB=9.21898e-07;MQSB=1.45451e-06;RPB=0.999997;SGB=-2.35301;VDB=0.65075;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.2:18403229 chr02:018403229 0 W/18403229-18403229 FN_949-1 Single Base Substitution G-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1205-S.SNP.2:18405262 chr02:018405262 0 W/18405262-18405262 FN1205-S Single Base Substitution C-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1448-S.SNP.2:18415471 chr02:018415471 0 W/18415471-18415471 FN1448-S Single Base Substitution A-G INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-283.SNP.2:18425232 chr02:018425232 0 W/18425232-18425232 FN-283 Single Base Substitution G-C INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1586-S.SNP.2:18426197 chr02:018426197 0 W/18426197-18426197 FN1586-S Single Base Substitution T-C INTERGENIC Homo SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN_772-3-1.SNP.2:18432723 chr02:018432723 0 W/18432723-18432723 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1297-S.SNP.2:18435547 chr02:018435547 0 W/18435547-18435547 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1543-S.SNP.2:18443800 chr02:018443800 0 W/18443800-18443800 FN1543-S Single Base Substitution C-G INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN-225.SNP.2:18447514 chr02:018447514 0 W/18447514-18447514 FN-225 Single Base Substitution C-T INTRON HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN482-S.SNP.2:18458837 chr02:018458837 0 W/18458837-18458837 FN482-S Single Base Substitution C-T INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN3420-S.SNP.2:18476139 chr02:018476139 0 W/18476139-18476139 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.971981;DP=2440;DP4=1190,1186,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=1.66976e-05;MQSB=0.00466383;RPB=0.915036;SGB=15.7097;VDB=0.944609;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.2:18478199 chr02:018478199 0 W/18478199-18478199 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.906654;DP=2626;DP4=1346,1185,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.61364e-05;MQSB=0.423071;RPB=0.868125;SGB=30.8803;VDB=0.957126;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.2:18483136 chr02:018483136 0 W/18483136-18483136 FN-232 Single Base Substitution G-A INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2539-S.SNP.2:18485293 chr02:018485293 0 W/18485293-18485293 FN2539-S SNP C -> A AC=1;AN=198;BQB=0.111024;DP=4232;DP4=2165,1849,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=8.24352e-08;MQSB=0.946916;RPB=0.98224;SGB=7.75428;VDB=0.33201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.2:18487749 chr02:018487749 0 W/18487749-18487749 FN-221 Single Base Substitution G-C INTERGENIC HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN2434.SNP.2:18491944 chr02:018491944 0 W/18491944-18491944 FN2434 SNP A -> T AC=2;AN=200;BQB=0.971594;DP=3649;DP4=1797,1606,13,6;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0;MQB=8.74273e-05;MQSB=0.600429;RPB=0.843109;SGB=81.8956;VDB=0.211195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.2:18491944 chr02:018491944 0 W/18491944-18491944 FN3326-S SNP A -> T AC=2;AN=184;BQB=0.842063;DP=2652;DP4=1423,1029,10,7;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=1.54879e-05;MQSB=0.0182804;RPB=0.646983;SGB=49.835;VDB=0.0282596;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.2:18491944 chr02:018491944 0 W/18491944-18491944 FN_949-1 Single Base Substitution A-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN3786-S.SNP.2:18512009 chr02:018512009 0 W/18512009-18512009 FN3786-S SNP T -> C AC=2;AN=190;BQB=0.863386;DP=2684;DP4=1407,1171,17,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.48617e-10;MQSB=1.38766e-05;RPB=0.754088;SGB=99.1879;VDB=0.636059;EFF=INTRON(MODIFIER||||567|LOC_Os02g30990|protein_coding|CODING|LOC_Os02g30990.1|4|1) FN3628-S.SNP.2:18522222 chr02:018522222 0 W/18522222-18522222 FN3628-S SNP T -> G AC=1;AN=190;BQB=0.845562;DP=2651;DP4=1330,1169,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0;MQB=0.000964671;MQSB=0.0679148;RPB=0.896299;SGB=30.8803;VDB=0.716595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaC|K169N|406|LOC_Os02g31010|protein_coding|CODING|LOC_Os02g31010.1|3|1) W721-2-1.SNP.2:18527363 chr02:018527363 0 W/18527363-18527363 W721-2-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g31020 expressed protein SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2316.SNP.2:18530418 chr02:018530418 0 W/18530418-18530418 FN2316 SNP G -> A AC=2;AN=192;BQB=0.832011;DP=3921;DP4=1882,1684,19,26;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0;MQB=6.05297e-09;MQSB=0.781702;RPB=0.977476;SGB=150.275;VDB=0.889424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.2:18530418 chr02:018530418 0 W/18530418-18530418 FN2638-S SNP G -> A AC=2;AN=200;BQB=0.861268;DP=4004;DP4=1932,1781,17,15;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0;MQB=0.000526342;MQSB=0.00939768;RPB=0.339408;SGB=68.5625;VDB=0.146847;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.2:18530418 chr02:018530418 0 W/18530418-18530418 FN863-S Single Base Substitution G-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2125-S.SNP.2:18537925 chr02:018537925 0 W/18537925-18537925 FN2125-S SNP T -> C AC=1;AN=168;BQB=0.850367;DP=1537;DP4=373,1122,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0014698;MQSB=0.527814;RPB=0.912498;SGB=-17.0958;VDB=0.732031;EFF=INTRON(MODIFIER||||387|LOC_Os02g31030|protein_coding|CODING|LOC_Os02g31030.1|2|1),INTRON(MODIFIER||||388|LOC_Os02g31030|protein_coding|CODING|LOC_Os02g31030.2|2|1) FN2462.SNP.2:18540807 chr02:018540807 0 W/18540807-18540807 FN2462 SNP C -> T AC=1;AN=200;BQB=0.471902;DP=4522;DP4=2065,2187,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.22854e-10;MQSB=0.973478;RPB=0.965949;SGB=37.3004;VDB=0.947154;EFF=UTR_3_PRIME(MODIFIER||295||387|LOC_Os02g31030|protein_coding|CODING|LOC_Os02g31030.1|8|1),UTR_3_PRIME(MODIFIER||295||388|LOC_Os02g31030|protein_coding|CODING|LOC_Os02g31030.2|8|1) FN391-S.SNP.2:18544458 chr02:018544458 0 W/18544458-18544458 FN391-S Single Base Substitution A-T INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN-289.SNP.2:18545042 chr02:018545042 0 W/18545042-18545042 FN-289 Single Base Substitution A-G INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN-200.SNP.2:18545096 chr02:018545096 0 W/18545096-18545096 FN-200 Single Base Substitution A-C INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-200.SNP.2:18549397 chr02:018549397 0 W/18549397-18549397 FN-200 Single Base Substitution C-T INTRON HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-200.SNP.2:18549398 chr02:018549398 0 W/18549398-18549398 FN-200 Single Base Substitution G-T INTRON HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3681-S.SNP.2:18550124 chr02:018550124 0 W/18550124-18550124 FN3681-S SNP A -> G AC=1;AN=190;BQB=0.996031;DP=2758;DP4=1248,1427,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00254044;MQSB=0.537384;RPB=0.685107;SGB=35.4339;VDB=0.530978;EFF=INTRON(MODIFIER||||497|LOC_Os02g31040|protein_coding|CODING|LOC_Os02g31040.1|4|1) W591-4-1.SNP.2:18554609 chr02:018554609 0 W/18554609-18554609 W591-4-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g31050 expressed protein SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN411-S.SNP.2:18557005 chr02:018557005 0 W/18557005-18557005 FN411-S Single Base Substitution A-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3824-S.SNP.2:18574163 chr02:018574163 0 W/18574163-18574163 FN3824-S SNP A -> G AC=1;AN=190;BQB=0.0429459;DP=2352;DP4=1021,1243,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00255102;MQB=0.00408394;MQSB=0.00427794;RPB=0.822582;SGB=67.3108;VDB=0.95595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.2:18575861 chr02:018575861 0 W/18575861-18575861 FN3861-S SNP A -> G AC=1;AN=158;BQB=0.829865;DP=2396;DP4=1248,1067,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.04375e-06;MQSB=0.724731;RPB=0.439153;SGB=16.7104;VDB=0.230819;EFF=INTRON(MODIFIER||||623|LOC_Os02g31080|protein_coding|CODING|LOC_Os02g31080.1|10|1) FN3883-S.SNP.2:18582307 chr02:018582307 0 W/18582307-18582307 FN3883-S SNP A -> G AC=1;AN=158;BQB=0.977871;DP=2324;DP4=1141,1058,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.34807e-08;MQSB=0.992117;RPB=0.847985;SGB=40.8124;VDB=0.794355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.2:18597091 chr02:018597091 0 W/18597091-18597091 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.932899;DP=5117;DP4=2547,2266,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75265e-12;MQSB=0.981959;RPB=0.890828;SGB=39.9056;VDB=0.258157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.2:18599135 chr02:018599135 0 W/18599135-18599135 FN3325-S SNP C -> T AC=1;AN=184;BQB=0.680472;DP=3120;DP4=1566,1406,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.22926e-07;MQSB=0.873358;RPB=0.842377;SGB=10.6662;VDB=0.681428;EFF=INTRON(MODIFIER||||174|LOC_Os02g31110|protein_coding|CODING|LOC_Os02g31110.1|1|1) FN3501-S.SNP.2:18606584 chr02:018606584 0 W/18606584-18606584 FN3501-S SNP T -> A AC=1;AN=188;BQB=0.964826;DP=2611;DP4=1251,1276,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.25943e-07;MQSB=0.9743;RPB=0.98999;SGB=44.4357;VDB=0.177966;EFF=INTRON(MODIFIER||||323|LOC_Os02g31120|protein_coding|CODING|LOC_Os02g31120.1|2|1) FN282-S.SNP.2:18608200 chr02:018608200 0 W/18608200-18608200 FN282-S Single Base Substitution A-T INTRON HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN-84.SNP.2:18616583 chr02:018616583 0 W/18616583-18616583 FN-84 Single Base Substitution T-A INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1255-S.SNP.2:18630266 chr02:018630266 0 W/18630266-18630266 FN1255-S Single Base Substitution G-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2557-S.SNP.2:18635297 chr02:018635297 0 W/18635297-18635297 FN2557-S SNP C -> T AC=1;AN=198;BQB=0.96209;DP=3685;DP4=1629,1656,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35709e-10;MQSB=0.229312;RPB=0.959259;SGB=-10.2651;VDB=0.209108;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.2:18643459 chr02:018643459 0 W/18643459-18643459 FN622-S Single Base Substitution A-G INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3594-S.SNP.2:18647166 chr02:018647166 0 W/18647166-18647166 FN3594-S SNP T -> A AC=1;AN=188;BQB=0.856281;DP=3377;DP4=1696,1562,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.39412e-15;MQSB=0.723373;RPB=0.966975;SGB=51.5091;VDB=0.387982;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.2:18650638 chr02:018650638 0 W/18650638-18650638 FN-106 Single Base Substitution T-A INTRON HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN-284.SNP.2:18662985 chr02:018662985 0 W/18662985-18662985 FN-284 Single Base Substitution C-G INTERGENIC HOMO SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN2491.SNP.2:18664707 chr02:018664707 0 W/18664707-18664707 FN2491 SNP T -> C AC=1;AN=200;BQB=0.998047;DP=4455;DP4=2260,1924,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.41061e-08;MQSB=0.99953;RPB=0.99696;SGB=33.0593;VDB=0.82583;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-1.SNP.2:18677777 chr02:018677777 0 W/18677777-18677777 FN_398-1 Single Base Substitution C-A INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN3717-S.SNP.2:18682108 chr02:018682108 0 W/18682108-18682108 FN3717-S SNP G -> A AC=2;AN=190;BQB=0.534626;DP=2680;DP4=1406,1160,9,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2759e-05;MQSB=0.426089;RPB=0.48777;SGB=36.1006;VDB=0.780419;EFF=INTRON(MODIFIER||||1327|LOC_Os02g31190|protein_coding|CODING|LOC_Os02g31190.1|3|1) FN803-S.SNP.2:18682436 chr02:018682436 0 W/18682436-18682436 FN803-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g31190 retrotransposon protein, putative, unclassified, expressed SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2557-S.SNP.2:18688664 chr02:018688664 0 W/18688664-18688664 FN2557-S SNP G -> A AC=1;AN=198;BQB=0.324034;DP=4196;DP4=1819,2182,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.96631e-07;MQSB=0.811451;RPB=0.531217;SGB=21.559;VDB=0.81359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.2:18693039 chr02:018693039 0 W/18693039-18693039 FN3503-S SNP C -> T AC=1;AN=188;BQB=0.49135;DP=3971;DP4=1819,2058,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.62489e-06;MQSB=0.941385;RPB=0.374359;SGB=44.4357;VDB=0.451699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.2:18694748 chr02:018694748 0 W/18694748-18694748 FN3774-S SNP T -> C AC=2;AN=190;BQB=0.344502;DP=2612;DP4=1061,1413,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.56714e-07;MQSB=0.722161;RPB=0.50013;SGB=71.6393;VDB=0.0329827;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.2:18699763 chr02:018699763 0 W/18699763-18699763 FN1363-S Single Base Substitution C-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN530-S.SNP.2:18702235 chr02:018702235 0 W/18702235-18702235 FN530-S Single Base Substitution G-A INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3777-S.SNP.2:18702548 chr02:018702548 0 W/18702548-18702548 FN3777-S SNP A -> G AC=2;AN=190;BQB=0.877317;DP=3048;DP4=1397,1542,25,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.08078e-20;MQSB=0.721278;RPB=0.685122;SGB=107.178;VDB=0.0409044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.2:18704727 chr02:018704727 0 W/18704727-18704727 FN2597-S SNP T -> A AC=1;AN=198;BQB=0.666376;DP=4486;DP4=2126,2089,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.43243e-13;MQSB=0.779075;RPB=0.99986;SGB=39.7248;VDB=0.324523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.2:18725504 chr02:018725504 0 W/18725504-18725504 FN3767-S SNP T -> G AC=2;AN=190;BQB=0.990683;DP=2342;DP4=1160,1094,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.09103e-12;MQSB=0.998224;RPB=0.959983;SGB=85.5263;VDB=0.921558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.2:18730130 chr02:018730130 0 W/18730130-18730130 FN3651-S SNP T -> A AC=1;AN=190;BQB=0.703808;DP=2650;DP4=1338,1225,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43563e-05;MQSB=0.886909;RPB=0.888127;SGB=18.552;VDB=0.416485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.2:18733011 chr02:018733011 0 W/18733011-18733011 FN3889-S SNP C -> T AC=2;AN=158;BQB=0.983077;DP=2428;DP4=1264,1079,17,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.88713e-19;MQSB=0.912776;RPB=0.199232;SGB=94.7235;VDB=0.345019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.2:18735570 chr02:018735570 0 W/18735570-18735570 FN1256-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN3090-S.SNP.2:18738977 chr02:018738977 0 W/18738977-18738977 FN3090-S SNP A -> G AC=1;AN=184;BQB=0.958055;DP=2832;DP4=1337,1282,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0102401;MQB=0.101979;MQSB=0.917419;RPB=0.828718;SGB=20.7533;VDB=0.0836807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.2:18738977 chr02:018738977 0 W/18738977-18738977 FN3494-S SNP A -> G AC=2;AN=184;BQB=0.950656;DP=2617;DP4=1174,1228,18,21;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0106993;MQB=6.39973e-05;MQSB=0.0140355;RPB=0.932008;SGB=46.678;VDB=0.822844;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.2:18738977 chr02:018738977 0 W/18738977-18738977 FN863-S Single Base Substitution A-G INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3512-S.SNP.2:18741148 chr02:018741148 0 W/18741148-18741148 FN3512-S SNP C -> G AC=1;AN=188;BQB=0.351867;DP=3099;DP4=1674,1363,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0416263;MQB=0.445396;MQSB=5.02846e-07;RPB=0.583864;SGB=7.0815;VDB=0.0325322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.2:18742844 chr02:018742844 0 W/18742844-18742844 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.0531186;DP=2752;DP4=1137,1245,19,11;HOB=7.08617e-05;ICB=0.000142567;MQ=15;MQ0F=0.460029;MQB=0.220661;MQSB=0;RPB=0.877609;SGB=-147.902;VDB=0.142403;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:18742844 chr02:018742844 0 W/18742844-18742844 FN2668-S SNP C -> T AC=2;AN=200;BQB=0.883765;DP=3253;DP4=1927,640,36,5;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0.137104;MQB=0.932419;MQSB=0;RPB=0.867015;SGB=102.781;VDB=0.905193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.2:18742844 chr02:018742844 0 W/18742844-18742844 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.676288;DP=1665;DP4=1162,348,11,2;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.142943;MQB=0.997749;MQSB=0;RPB=0.0435776;SGB=36.1006;VDB=0.283476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.2:18744742 chr02:018744742 0 W/18744742-18744742 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.885875;DP=2684;DP4=1388,1193,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0312966;MQB=0.0521818;MQSB=0.0124648;RPB=0.761647;SGB=43.2083;VDB=0.125803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.2:18748123 chr02:018748123 0 W/18748123-18748123 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.596785;DP=3080;DP4=1166,1772,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.34374e-05;MQSB=0.464187;RPB=0.988289;SGB=53.2642;VDB=0.458309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.2:18756145 chr02:018756145 0 W/18756145-18756145 FN3982-S SNP T -> C AC=1;AN=168;BQB=0.998811;DP=2767;DP4=1310,1349,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53412e-06;MQSB=0.999927;RPB=0.159367;SGB=47.7421;VDB=0.301259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.2:18758776 chr02:018758776 0 W/18758776-18758776 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.643991;DP=2675;DP4=1193,1398,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0523364;MQB=0.262686;MQSB=0.0010785;RPB=0.996992;SGB=3.4556;VDB=0.677165;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.2:18764492 chr02:018764492 0 W/18764492-18764492 FN-298 Single Base Substitution A-T INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. W453-3-1.SNP.2:18775144 chr02:018775144 0 W/18775144-18775144 W453-3-1 Single Base Substitution C-T INTRON HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN-384.SNP.2:18775798 chr02:018775798 0 W/18775798-18775798 FN-384 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g31290 AML1, putative, expressed SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN-332.SNP.2:18778552 chr02:018778552 0 W/18778552-18778552 FN-332 Single Base Substitution G-A INTERGENIC HOMO SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1402-S.SNP.2:18786646 chr02:018786646 0 W/18786646-18786646 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3944-S.SNP.2:18793579 chr02:018793579 0 W/18793579-18793579 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.856959;DP=2335;DP4=676,1565,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0916488;MQB=0.467489;MQSB=3.0488e-23;RPB=0.0849494;SGB=69.8961;VDB=0.319005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.2:18802266 chr02:018802266 0 W/18802266-18802266 FN2082-S SNP G -> T AC=1;AN=168;BQB=0.602227;DP=3361;DP4=1386,1937,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.53913e-10;MQSB=0.98113;RPB=0.858392;SGB=-11.926;VDB=0.450692;EFF=INTRON(MODIFIER||||562|LOC_Os02g31830|protein_coding|CODING|LOC_Os02g31830.1|2|1) FN2582-S.SNP.2:18803359 chr02:018803359 0 W/18803359-18803359 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.997625;DP=3909;DP4=1771,1917,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=5.04814e-06;MQSB=0.130589;RPB=0.321416;SGB=40.3588;VDB=0.348463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.2:18817884 chr02:018817884 0 W/18817884-18817884 FN2358 SNP G -> A AC=1;AN=192;BQB=0.280659;DP=4908;DP4=2290,2368,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44672e-08;MQSB=0.926036;RPB=0.970618;SGB=10.4835;VDB=0.771701;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.2:18820406 chr02:018820406 0 W/18820406-18820406 FN3610-S SNP A -> C AC=1;AN=190;BQB=0.961925;DP=2953;DP4=1482,1340,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55521e-11;MQSB=0.920717;RPB=0.145008;SGB=94.6341;VDB=0.520917;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aGa|I278R|601|LOC_Os02g31860|protein_coding|CODING|LOC_Os02g31860.1|2|1) FN1255-S.SNP.2:18831211 chr02:018831211 0 W/18831211-18831211 FN1255-S Single Base Substitution A-C INTRON HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2692-S.SNP.2:18839604 chr02:018839604 0 W/18839604-18839604 FN2692-S SNP T -> A AC=2;AN=200;BQB=0.830584;DP=5143;DP4=2445,2435,24,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.26193e-28;MQSB=0.934902;RPB=0.967394;SGB=67.2761;VDB=0.967429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T357S|492|LOC_Os02g31890|protein_coding|CODING|LOC_Os02g31890.1|3|1) FN512-S.SNP.2:18850283 chr02:018850283 0 W/18850283-18850283 FN512-S Single Base Substitution G-T INTRON HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2629-S.SNP.2:18853268 chr02:018853268 0 W/18853268-18853268 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.97729;DP=5089;DP4=2489,2384,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06281e-10;MQSB=0.867893;RPB=0.984247;SGB=51.0851;VDB=0.402152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.2:18854026 chr02:018854026 0 W/18854026-18854026 FN-353 Single Base Substitution G-T INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1170-S.SNP.2:18854604 chr02:018854604 0 W/18854604-18854604 FN1170-S Single Base Substitution T-C INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2664-S.SNP.2:18855984 chr02:018855984 0 W/18855984-18855984 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.674869;DP=4814;DP4=2284,2285,19,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49975e-22;MQSB=0.948653;RPB=0.752176;SGB=164.789;VDB=0.57536;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.2:18858921 chr02:018858921 0 W/18858921-18858921 FN4203-S SNP T -> A AC=2;AN=170;BQB=0.969067;DP=2638;DP4=1148,1377,15,25;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.69963e-22;MQSB=0.987506;RPB=0.976431;SGB=127.83;VDB=0.0999858;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.2:18861906 chr02:018861906 0 W/18861906-18861906 FN863-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1709-S.SNP.2:18866167 chr02:018866167 0 W/18866167-18866167 FN1709-S SNP T -> C AC=1;AN=188;BQB=0.763891;DP=2802;DP4=1520,1251,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.0186055;MQSB=0.57033;RPB=0.531888;SGB=48.979;VDB=0.205941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.2:18869606 chr02:018869606 0 W/18869606-18869606 FN1754-S SNP C -> T AC=1;AN=188;BQB=0.610669;DP=1973;DP4=915,1020,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.08644e-05;MQSB=0.985614;RPB=0.988493;SGB=-15.5431;VDB=0.626441;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.2:18869979 chr02:018869979 0 W/18869979-18869979 FN4185-S SNP C -> T AC=2;AN=170;BQB=0.785842;DP=2204;DP4=1155,970,7,13;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=5.30802e-06;MQSB=0.558015;RPB=0.986999;SGB=58.9766;VDB=0.717552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-406.SNP.2:18876068 chr02:018876068 0 W/18876068-18876068 FN-406 Single Base Substitution C-A INTRON HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN406-S.SNP.2:18876068 chr02:018876068 0 W/18876068-18876068 FN406-S Single Base Substitution C-A INTRON HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN1583-S.SNP.2:18882209 chr02:018882209 0 W/18882209-18882209 FN1583-S Single Base Substitution G-T INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1583-S.SNP.2:18882210 chr02:018882210 0 W/18882210-18882210 FN1583-S Single Base Substitution C-T INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2164-S.SNP.2:18882702 chr02:018882702 0 W/18882702-18882702 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.336165;DP=2212;DP4=959,1189,6,18;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=0.000348396;MQSB=0.356352;RPB=0.656018;SGB=15.6372;VDB=0.59527;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A83|91|LOC_Os02g31950|protein_coding|CODING|LOC_Os02g31950.1|1|1) FN2130-S.SNP.2:18883534 chr02:018883534 0 W/18883534-18883534 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.626646;DP=1782;DP4=853,869,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.0025543;MQSB=0.41785;RPB=0.736013;SGB=21.0249;VDB=0.54069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.2:18885343 chr02:018885343 0 W/18885343-18885343 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.524812;DP=4145;DP4=2065,1915,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.00820265;MQB=4.27642e-05;MQSB=0.115711;RPB=0.665945;SGB=43.7442;VDB=0.198913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.2:18885656 chr02:018885656 0 W/18885656-18885656 FN2660-S SNP G -> A AC=2;AN=200;BQB=0.733227;DP=4660;DP4=2113,2263,28,16;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=4.05168e-21;MQSB=0.151505;RPB=0.432817;SGB=148.425;VDB=0.818824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.2:18889362 chr02:018889362 0 W/18889362-18889362 FN2190-S SNP G -> C AC=1;AN=190;BQB=0.972074;DP=4279;DP4=2024,2061,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00233699;MQB=3.27446e-09;MQSB=0.990752;RPB=0.517706;SGB=107.178;VDB=0.257967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.2:18890074 chr02:018890074 0 W/18890074-18890074 FN2244-S SNP T -> C AC=2;AN=190;BQB=0.96779;DP=4833;DP4=2357,2115,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.92224e-13;MQSB=0.686905;RPB=0.335946;SGB=112.85;VDB=0.475419;EFF=UTR_3_PRIME(MODIFIER||542||333|LOC_Os02g31960|protein_coding|CODING|LOC_Os02g31960.1|14|1),UTR_3_PRIME(MODIFIER||542||123|LOC_Os02g31960|protein_coding|CODING|LOC_Os02g31960.3|5|1),UTR_3_PRIME(MODIFIER||542||97|LOC_Os02g31960|protein_coding|CODING|LOC_Os02g31960.4|4|1) FN-287.SNP.2:18897204 chr02:018897204 0 W/18897204-18897204 FN-287 Single Base Substitution T-C INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN439-S.SNP.2:18901192 chr02:018901192 0 W/18901192-18901192 FN439-S Single Base Substitution C-A INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN2299.SNP.2:18902639 chr02:018902639 0 W/18902639-18902639 FN2299 SNP T -> C AC=1;AN=192;BQB=0.349134;DP=4848;DP4=2802,1661,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.014657;MQSB=0.616959;RPB=0.441978;SGB=16.0922;VDB=0.148495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H92R|99|LOC_Os02g31980|protein_coding|CODING|LOC_Os02g31980.1|1|1) FN3788-S.SNP.2:18910876 chr02:018910876 0 W/18910876-18910876 FN3788-S SNP C -> T AC=1;AN=190;BQB=0.999913;DP=2202;DP4=1357,713,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.84179e-07;MQSB=0.187469;RPB=0.975349;SGB=36.1006;VDB=0.181085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.2:18911419 chr02:018911419 0 W/18911419-18911419 FN2141-S SNP C -> A AC=1;AN=168;BQB=0.0245926;DP=1680;DP4=448,1183,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000335055;MQSB=0.255042;RPB=0.382939;SGB=-57.0838;VDB=0.626131;EFF=INTRON(MODIFIER||||89|LOC_Os02g32020|protein_coding|CODING|LOC_Os02g32020.1|1|1) FN1085-S.SNP.2:18911614 chr02:018911614 0 W/18911614-18911614 FN1085-S Single Base Substitution C-T INTRON HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3356-S.SNP.2:18913171 chr02:018913171 0 W/18913171-18913171 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.745785;DP=2825;DP4=992,1642,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000411304;MQSB=0.00573806;RPB=0.988342;SGB=39.699;VDB=0.484466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.2:18918457 chr02:018918457 0 W/18918457-18918457 FN3064-S SNP C -> G AC=1;AN=184;BQB=0.961729;DP=2877;DP4=1383,1423,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36627e-05;MQSB=0.912899;RPB=0.997584;SGB=39.699;VDB=0.812497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A26G|843|LOC_Os02g32030|protein_coding|CODING|LOC_Os02g32030.1|2|1) FN3942-S.SNP.2:18922946 chr02:018922946 0 W/18922946-18922946 FN3942-S SNP C -> G AC=1;AN=168;BQB=0.702766;DP=2770;DP4=1201,1445,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.00899242;MQSB=0.425154;RPB=0.554901;SGB=24.4556;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.2:18927682 chr02:018927682 0 W/18927682-18927682 FN3110-S SNP G -> T AC=1;AN=184;BQB=0.986593;DP=2592;DP4=1296,1214,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.57894e-10;MQSB=0.992727;RPB=0.71159;SGB=75.8731;VDB=0.306897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.2:18928353 chr02:018928353 0 W/18928353-18928353 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.850007;DP=4584;DP4=1875,2316,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0061082;MQB=4.44879e-05;MQSB=0.380961;RPB=0.888191;SGB=10.8904;VDB=0.482741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.2:18935512 chr02:018935512 0 W/18935512-18935512 FN3664-S SNP G -> C AC=2;AN=190;BQB=0.992764;DP=2895;DP4=1549,1247,13,10;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0;MQB=4.17278e-07;MQSB=0.509637;RPB=0.413341;SGB=99.1879;VDB=0.702889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.2:18940204 chr02:018940204 0 W/18940204-18940204 FN3668-S SNP G -> A AC=1;AN=190;BQB=0.727479;DP=2722;DP4=1214,1417,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00110213;MQB=0.000462603;MQSB=0.104148;RPB=0.649753;SGB=44.5415;VDB=0.860218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.2:18944951 chr02:018944951 0 W/18944951-18944951 FN1421-S Single Base Substitution A-G INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN594-S.SNP.2:18946175 chr02:018946175 0 W/18946175-18946175 FN594-S Single Base Substitution A-C INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3528-S.SNP.2:18955794 chr02:018955794 0 W/18955794-18955794 FN3528-S SNP G -> T AC=1;AN=188;BQB=0.924072;DP=2626;DP4=1311,1229,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00114242;MQB=7.58725e-08;MQSB=0.575338;RPB=0.969225;SGB=39.5276;VDB=0.64762;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.2:18958734 chr02:018958734 0 W/18958734-18958734 FN956-S Single Base Substitution C-T INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1119-S.SNP.2:18958962 chr02:018958962 0 W/18958962-18958962 FN1119-S Single Base Substitution C-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3331-S.SNP.2:18959720 chr02:018959720 0 W/18959720-18959720 FN3331-S SNP A -> C AC=2;AN=184;BQB=0.284257;DP=2920;DP4=1307,1517,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.23075e-11;MQSB=0.823289;RPB=0.99993;SGB=45.9712;VDB=0.984649;EFF=INTERGENIC(MODIFIER||||||||||1) FN906-S.SNP.2:18961172 chr02:018961172 0 W/18961172-18961172 FN906-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g32090 retrotransposon protein, putative, unclassified, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN906-S.SNP.2:18961173 chr02:018961173 0 W/18961173-18961173 FN906-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g32090 retrotransposon protein, putative, unclassified, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN4132-S.SNP.2:18961476 chr02:018961476 0 W/18961476-18961476 FN4132-S SNP C -> T AC=2;AN=182;BQB=0.758368;DP=3354;DP4=1443,1831,17,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.1224e-16;MQSB=0.998774;RPB=0.905292;SGB=105.845;VDB=0.596623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S120L|1515|LOC_Os02g32090|protein_coding|CODING|LOC_Os02g32090.1|2|1) FN1385-S.SNP.2:18965108 chr02:018965108 0 W/18965108-18965108 FN1385-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-329.SNP.2:18976628 chr02:018976628 0 W/18976628-18976628 FN-329 Single Base Substitution A-T INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1436-S.SNP.2:18982124 chr02:018982124 0 W/18982124-18982124 FN1436-S Single Base Substitution T-A INTRON HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN-410.SNP.2:18989891 chr02:018989891 0 W/18989891-18989891 FN-410 Single Base Substitution C-A INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2600-S.SNP.2:18998797 chr02:018998797 0 W/18998797-18998797 FN2600-S SNP A -> G AC=1;AN=198;BQB=0.873896;DP=4033;DP4=2043,1847,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.38143e-12;MQSB=0.962182;RPB=0.969644;SGB=58.1246;VDB=0.579875;EFF=INTRON(MODIFIER||||584|LOC_Os02g32160|protein_coding|CODING|LOC_Os02g32160.1|2|1) FN1375-S.SNP.2:19007678 chr02:019007678 0 W/19007678-19007678 FN1375-S Single Base Substitution T-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN568-S.SNP.2:19022936 chr02:019022936 0 W/19022936-19022936 FN568-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1340-S.SNP.2:19023097 chr02:019023097 0 W/19023097-19023097 FN1340-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1725-S.SNP.2:19024847 chr02:019024847 0 W/19024847-19024847 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.138003;DP=2207;DP4=934,1218,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03471e-06;MQSB=0.999031;RPB=0.941128;SGB=-14.4565;VDB=0.876701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.2:19027910 chr02:019027910 0 W/19027910-19027910 FN2203-S SNP A -> G AC=1;AN=190;BQB=0.398693;DP=4785;DP4=2212,2167,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208986;MQB=8.49826e-13;MQSB=0.944057;RPB=0.417346;SGB=85.5263;VDB=0.738202;EFF=INTRON(MODIFIER||||195|LOC_Os02g32210|protein_coding|CODING|LOC_Os02g32210.1|1|1) FN3885-S.SNP.2:19039074 chr02:019039074 0 W/19039074-19039074 FN3885-S SNP A -> T AC=1;AN=158;BQB=0.973795;DP=2503;DP4=1104,1309,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.54896e-09;MQSB=0.929662;RPB=0.963244;SGB=55.806;VDB=0.847282;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K970*|1424|LOC_Os02g32230|protein_coding|CODING|LOC_Os02g32230.1|1|1),STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K99*|218|LOC_Os02g32230|protein_coding|CODING|LOC_Os02g32230.2|1|1);LOF=(LOC_Os02g32230|LOC_Os02g32230|2|0.50);NMD=(LOC_Os02g32230|LOC_Os02g32230|2|0.50) FN4163-S.SNP.2:19041621 chr02:019041621 0 W/19041621-19041621 FN4163-S SNP A -> G AC=1;AN=170;BQB=0.997448;DP=2562;DP4=1201,1262,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.2479e-09;MQSB=0.900418;RPB=0.963153;SGB=45.206;VDB=0.706638;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.2:19051441 chr02:019051441 0 W/19051441-19051441 FN1009-S Single Base Substitution G-A INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2418.SNP.2:19051963 chr02:019051963 0 W/19051963-19051963 FN2418 SNP C -> G AC=1;AN=200;BQB=0.0768214;DP=3802;DP4=1702,1759,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84862e-06;MQSB=0.266918;RPB=0.860574;SGB=14.3054;VDB=0.935527;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.2:19054746 chr02:019054746 0 W/19054746-19054746 FN993-S Single Base Substitution A-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN3448-S.SNP.2:19055619 chr02:019055619 0 W/19055619-19055619 FN3448-S SNP A -> G AC=1;AN=184;BQB=0.998956;DP=2163;DP4=1065,1029,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.59075e-08;MQSB=0.989147;RPB=0.319628;SGB=48.7425;VDB=0.0666729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.2:19056001 chr02:019056001 0 W/19056001-19056001 FN1465-S Single Base Substitution A-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2481.SNP.2:19058130 chr02:019058130 0 W/19058130-19058130 FN2481 SNP C -> T AC=1;AN=200;BQB=0.999684;DP=4750;DP4=2305,2145,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.96559e-10;MQSB=0.98003;RPB=0.929125;SGB=29.4849;VDB=0.406038;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.2:19058228 chr02:019058228 0 W/19058228-19058228 FN413-S Single Base Substitution T-C INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3858-S.SNP.2:19061654 chr02:019061654 0 W/19061654-19061654 FN3858-S SNP G -> T AC=1;AN=158;BQB=0.975904;DP=2355;DP4=1238,1038,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.70899e-07;MQSB=0.949288;RPB=0.804054;SGB=38.3284;VDB=0.888013;EFF=INTRON(MODIFIER||||459|LOC_Os02g32280|protein_coding|CODING|LOC_Os02g32280.1|5|1) FN2575-S.SNP.2:19063024 chr02:019063024 0 W/19063024-19063024 FN2575-S SNP T -> G AC=1;AN=198;BQB=0.907616;DP=4270;DP4=2109,1954,24,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.7672e-27;MQSB=0.707846;RPB=0.797717;SGB=196.593;VDB=0.366341;EFF=INTRON(MODIFIER||||459|LOC_Os02g32280|protein_coding|CODING|LOC_Os02g32280.1|8|1) FN2117-S.SNP.2:19066618 chr02:019066618 0 W/19066618-19066618 FN2117-S SNP G -> C AC=2;AN=168;BQB=0.00019052;DP=2718;DP4=1004,1506,6,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000658474;MQSB=0.995387;RPB=0.0139501;SGB=-364.02;VDB=0.0295083;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.2:19067207 chr02:019067207 0 W/19067207-19067207 FN-21 Single Base Substitution G-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN1444-S.SNP.2:19074958 chr02:019074958 0 W/19074958-19074958 FN1444-S Single Base Substitution T-C INTRON HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3310-S.SNP.2:19079096 chr02:019079096 0 W/19079096-19079096 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.62314;DP=3226;DP4=1451,1639,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.84071e-10;MQSB=0.933401;RPB=0.596177;SGB=6.80232;VDB=0.254923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.2:19079097 chr02:019079097 0 W/19079097-19079097 FN3310-S SNP T -> A AC=1;AN=184;BQB=0.910973;DP=3224;DP4=1454,1668,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09704e-10;MQSB=0.963235;RPB=0.757277;SGB=25.7969;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.2:19080089 chr02:019080089 0 W/19080089-19080089 FN708-S Single Base Substitution C-T INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN978-S.SNP.2:19101526 chr02:019101526 0 W/19101526-19101526 FN978-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g32350 TUDOR protein with multiple SNc domains, putative, expressed SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-353.SNP.2:19115723 chr02:019115723 0 W/19115723-19115723 FN-353 Single Base Substitution G-A INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1373-S.SNP.2:19115990 chr02:019115990 0 W/19115990-19115990 FN1373-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-193.SNP.2:19128115 chr02:019128115 0 W/19128115-19128115 FN-193 Single Base Substitution G-A INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1718-S.SNP.2:19133040 chr02:019133040 0 W/19133040-19133040 FN1718-S SNP C -> T AC=2;AN=188;BQB=0.871063;DP=2623;DP4=1161,1405,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.69074e-12;MQSB=0.914915;RPB=0.976777;SGB=-39.1914;VDB=0.571824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.2:19133500 chr02:019133500 0 W/19133500-19133500 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.291455;DP=3075;DP4=1349,1559,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.49e-12;MQSB=0.889859;RPB=0.885139;SGB=90.9049;VDB=0.204823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.2:19133621 chr02:019133621 0 W/19133621-19133621 FN2428 SNP G -> T AC=2;AN=200;BQB=0.960875;DP=1928;DP4=820,869,16,6;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.85337e-11;MQSB=0.25673;RPB=0.992448;SGB=95.7111;VDB=0.0382946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.2:19133622 chr02:019133622 0 W/19133622-19133622 FN2428 SNP A -> T AC=2;AN=200;BQB=0.897274;DP=1922;DP4=759,754,16,9;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.06526e-11;MQSB=0.699231;RPB=0.937928;SGB=71.7312;VDB=0.027055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.2:19145830 chr02:019145830 0 W/19145830-19145830 FN3810-S SNP C -> G AC=2;AN=190;BQB=0.768822;DP=2323;DP4=1244,989,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.73027e-10;MQSB=0.658275;RPB=0.0385322;SGB=90.0802;VDB=0.303235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.2:19150315 chr02:019150315 0 W/19150315-19150315 FN2456 SNP A -> T AC=2;AN=200;BQB=0.0909801;DP=4829;DP4=1911,2511,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.52604e-20;MQSB=0.754098;RPB=0.442142;SGB=141.763;VDB=0.0862015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.2:19171304 chr02:019171304 0 W/19171304-19171304 FN2157-S SNP A -> G AC=1;AN=168;BQB=0.0291502;DP=3585;DP4=1837,1709,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00055788;MQB=0.0104638;MQSB=0.124149;RPB=0.443484;SGB=-132.066;VDB=0.194424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.2:19175765 chr02:019175765 0 W/19175765-19175765 FN1517-S Single Base Substitution G-A INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN975-S.SNP.2:19180485 chr02:019180485 0 W/19180485-19180485 FN975-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g32440 expressed protein SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN414-S.SNP.2:19181468 chr02:019181468 0 W/19181468-19181468 FN414-S Single Base Substitution G-T INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1074-S.SNP.2:19215909 chr02:019215909 0 W/19215909-19215909 FN1074-S Single Base Substitution A-T INTERGENIC HET SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN4134-S.SNP.2:19216545 chr02:019216545 0 W/19216545-19216545 FN4134-S SNP C -> T AC=2;AN=182;BQB=0.350526;DP=3597;DP4=1538,1958,20,21;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=7.37006e-17;MQSB=0.997657;RPB=0.905691;SGB=133.932;VDB=0.848398;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.2:19221150 chr02:019221150 0 W/19221150-19221150 FN788-S Single Base Substitution A-G INTRON HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2257-S.SNP.2:19235694 chr02:019235694 0 W/19235694-19235694 FN2257-S SNP C -> A AC=1;AN=190;BQB=0.942623;DP=4360;DP4=2059,2024,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0;MQB=0.0942476;MQSB=0.099564;RPB=0.352393;SGB=33.8752;VDB=0.380423;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.2:19243629 chr02:019243629 0 W/19243629-19243629 FN224-S Single Base Substitution C-T INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1761-S.SNP.2:19248589 chr02:019248589 0 W/19248589-19248589 FN1761-S SNP T -> C AC=2;AN=188;BQB=5.38626e-06;DP=4608;DP4=2039,2509,24,21;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=0.148499;MQSB=1.49306e-32;RPB=0.948532;SGB=-395.548;VDB=0.140334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.2:19257742 chr02:019257742 0 W/19257742-19257742 FN3945-S SNP A -> G AC=1;AN=168;BQB=0.97815;DP=2565;DP4=1112,1355,2,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00123862;MQSB=0.993303;RPB=0.278411;SGB=21.0249;VDB=0.399478;EFF=UTR_3_PRIME(MODIFIER||1180||137|LOC_Os02g32530|protein_coding|CODING|LOC_Os02g32530.3|2|1),INTRON(MODIFIER||||172|LOC_Os02g32530|protein_coding|CODING|LOC_Os02g32530.1|3|1),INTRON(MODIFIER||||137|LOC_Os02g32530|protein_coding|CODING|LOC_Os02g32530.2|2|1) FN-371.SNP.2:19259076 chr02:019259076 0 W/19259076-19259076 FN-371 Single Base Substitution C-T INTRON HOMO SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3064-S.SNP.2:19263697 chr02:019263697 0 W/19263697-19263697 FN3064-S SNP C -> A AC=1;AN=184;BQB=0.820273;DP=2208;DP4=1140,1022,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=3.00832e-05;MQSB=0.00737184;RPB=0.907152;SGB=39.699;VDB=0.484466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.2:19266218 chr02:019266218 0 W/19266218-19266218 FN2151-S SNP G -> T AC=1;AN=168;BQB=0.0349412;DP=4151;DP4=2195,1913,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.00377294;MQSB=0.99378;RPB=0.999913;SGB=-77.4832;VDB=0.341584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.2:19266649 chr02:019266649 0 W/19266649-19266649 FN1394-S Single Base Substitution A-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3305-S.SNP.2:19274648 chr02:019274648 0 W/19274648-19274648 FN3305-S SNP C -> T AC=2;AN=184;BQB=0.996789;DP=2896;DP4=1395,1367,10,7;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=0.000594827;MQSB=0.823059;RPB=0.454483;SGB=49.835;VDB=0.377526;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.2:19274648 chr02:019274648 0 W/19274648-19274648 FN860-S Single Base Substitution C-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN1482-S.SNP.2:19275788 chr02:019275788 0 W/19275788-19275788 FN1482-S Single Base Substitution C-T INTERGENIC Homo SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN3470-S.SNP.2:19276006 chr02:019276006 0 W/19276006-19276006 FN3470-S SNP A -> T AC=1;AN=184;BQB=0.975401;DP=2270;DP4=1088,1103,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.4543e-05;MQSB=0.995907;RPB=0.959802;SGB=75.8731;VDB=0.886815;EFF=INTERGENIC(MODIFIER||||||||||1) FN-37.SNP.2:19289974 chr02:019289974 0 W/19289974-19289974 FN-37 Single Base Substitution T-C INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN2348.SNP.2:19293951 chr02:019293951 0 W/19293951-19293951 FN2348 SNP G -> A AC=1;AN=192;BQB=0.587434;DP=4171;DP4=1937,1912,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000239751;MQB=3.15058e-06;MQSB=0.0061675;RPB=0.0874804;SGB=-36.1991;VDB=0.866788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.2:19296090 chr02:019296090 0 W/19296090-19296090 FN3763-S SNP A -> T AC=2;AN=190;BQB=0.96931;DP=2757;DP4=1374,1281,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.6618e-15;MQSB=0.787129;RPB=0.737666;SGB=78.7471;VDB=0.299084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N224Y|856|LOC_Os02g32570|protein_coding|CODING|LOC_Os02g32570.1|7|1) FN3901-S.SNP.2:19302959 chr02:019302959 0 W/19302959-19302959 FN3901-S SNP G -> T AC=1;AN=158;BQB=0.580308;DP=2445;DP4=1130,1210,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.94806e-05;MQSB=0.997919;RPB=0.987561;SGB=51.4366;VDB=0.821212;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E601*|607|LOC_Os02g32570|protein_coding|CODING|LOC_Os02g32570.2|13|1),STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E850*|856|LOC_Os02g32570|protein_coding|CODING|LOC_Os02g32570.1|20|1) FN1046-S.SNP.2:19307946 chr02:019307946 0 W/19307946-19307946 FN1046-S Single Base Substitution A-G INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN-119.SNP.2:19312103 chr02:019312103 0 W/19312103-19312103 FN-119 Single Base Substitution C-A INTRON HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-119.SNP.2:19312104 chr02:019312104 0 W/19312104-19312104 FN-119 Single Base Substitution A-T INTRON HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2255-S.SNP.2:19327467 chr02:019327467 0 W/19327467-19327467 FN2255-S SNP T -> C AC=1;AN=190;BQB=0.607774;DP=4825;DP4=2253,2219,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8874e-11;MQSB=0.855675;RPB=0.278998;SGB=-37.2167;VDB=0.783491;EFF=INTRON(MODIFIER||||781|LOC_Os02g32610|protein_coding|CODING|LOC_Os02g32610.2|10|1),INTRON(MODIFIER||||781|LOC_Os02g32610|protein_coding|CODING|LOC_Os02g32610.3|10|1),INTRON(MODIFIER||||705|LOC_Os02g32610|protein_coding|CODING|LOC_Os02g32610.4|10|1) FN1033-S.SNP.2:19332014 chr02:019332014 0 W/19332014-19332014 FN1033-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3401-S.SNP.2:19338328 chr02:019338328 0 W/19338328-19338328 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.929335;DP=2949;DP4=1450,1342,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0403527;MQB=1.79832e-07;MQSB=0.916699;RPB=0.38887;SGB=18.9766;VDB=0.587992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.2:19345531 chr02:019345531 0 W/19345531-19345531 FN2310 SNP C -> A AC=2;AN=192;BQB=0.409918;DP=2880;DP4=1236,1422,11,8;HOB=0.0206163;ICB=0.494846;MQ=32;MQ0F=0.000347222;MQB=0.258016;MQSB=0.0742963;RPB=0.0495793;SGB=34.0426;VDB=0.000101251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.2:19368258 chr02:019368258 0 W/19368258-19368258 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.999194;DP=2983;DP4=1489,1422,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0;MQB=0.165358;MQSB=0.607718;RPB=0.265462;SGB=53.5223;VDB=0.0917102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.2:19375172 chr02:019375172 0 W/19375172-19375172 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.973573;DP=3113;DP4=1747,1259,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.35355e-12;MQSB=0.00858928;RPB=0.818734;SGB=43.4494;VDB=0.504684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.2:19375173 chr02:019375173 0 W/19375173-19375173 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.996139;DP=3123;DP4=1734,1254,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.74246e-13;MQSB=0.00314699;RPB=0.774125;SGB=84.9167;VDB=0.650177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.2:19375174 chr02:019375174 0 W/19375174-19375174 FN3294-S SNP A -> T AC=1;AN=184;BQB=0.997266;DP=3126;DP4=1781,1242,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.49212e-14;MQSB=0.00215839;RPB=0.799768;SGB=63.9222;VDB=0.59569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.2:19397301 chr02:019397301 0 W/19397301-19397301 FN2340 SNP T -> C AC=2;AN=192;BQB=0.43677;DP=4991;DP4=2347,2312,28,18;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000200361;MQB=4.35511e-18;MQSB=0.119519;RPB=0.98054;SGB=52.7209;VDB=0.944103;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.2:19400561 chr02:019400561 0 W/19400561-19400561 FN955-S Single Base Substitution C-A INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-407.SNP.2:19400863 chr02:019400863 0 W/19400863-19400863 FN-407 Single Base Substitution C-T INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN2583-S.SNP.2:19409541 chr02:019409541 0 W/19409541-19409541 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.530436;DP=4763;DP4=2324,2145,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.25535e-07;MQSB=0.783217;RPB=0.947407;SGB=-35.3156;VDB=0.0274892;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G884|1412|LOC_Os02g32690|protein_coding|CODING|LOC_Os02g32690.1|14|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G884|1184|LOC_Os02g32690|protein_coding|CODING|LOC_Os02g32690.2|14|1) FN3319-S.SNP.2:19419298 chr02:019419298 0 W/19419298-19419298 FN3319-S SNP C -> T AC=2;AN=184;BQB=0.867951;DP=2287;DP4=903,1236,10,5;HOB=0.0215028;ICB=0.494625;MQ=32;MQ0F=0.0393529;MQB=0.138957;MQSB=7.05907e-18;RPB=0.735749;SGB=23.2751;VDB=0.395459;EFF=INTRON(MODIFIER||||1412|LOC_Os02g32690|protein_coding|CODING|LOC_Os02g32690.1|4|1),INTRON(MODIFIER||||1184|LOC_Os02g32690|protein_coding|CODING|LOC_Os02g32690.2|4|1) FN2579-S.SNP.2:19428061 chr02:019428061 0 W/19428061-19428061 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.87591;DP=4514;DP4=1851,2434,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=3.87435e-06;MQSB=0.000796749;RPB=0.278866;SGB=58.1246;VDB=0.615287;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.2:19433089 chr02:019433089 0 W/19433089-19433089 FN242-S Single Base Substitution T-C INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN3467-S.SNP.2:19438208 chr02:019438208 0 W/19438208-19438208 FN3467-S SNP G -> A AC=1;AN=184;BQB=0.503616;DP=2665;DP4=1430,1148,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.32816e-08;MQSB=0.0146308;RPB=0.782774;SGB=28.3187;VDB=0.711837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R34K|606|LOC_Os02g32730|protein_coding|CODING|LOC_Os02g32730.1|2|1) FN1379-S.SNP.2:19445033 chr02:019445033 0 W/19445033-19445033 FN1379-S Single Base Substitution A-G INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-232.SNP.2:19447307 chr02:019447307 0 W/19447307-19447307 FN-232 Single Base Substitution T-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1323-S.SNP.2:19449900 chr02:019449900 0 W/19449900-19449900 FN1323-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN2312.SNP.2:19453763 chr02:019453763 0 W/19453763-19453763 FN2312 SNP G -> C AC=2;AN=192;BQB=0.110569;DP=2740;DP4=353,2210,4,18;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=3.08062e-06;MQSB=9.34092e-08;RPB=0.491035;SGB=-11.3826;VDB=0.799342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.2:19456416 chr02:019456416 0 W/19456416-19456416 FN2689-S SNP C -> A AC=1;AN=200;BQB=0.883462;DP=4955;DP4=2366,2353,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.5348e-12;MQSB=0.899422;RPB=0.359688;SGB=37.3004;VDB=0.53471;EFF=INTRON(MODIFIER||||113|LOC_Os02g32760|protein_coding|CODING|LOC_Os02g32760.1|2|1) FN-107.SNP.2:19470805 chr02:019470805 0 W/19470805-19470805 FN-107 Single Base Substitution A-G INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1552-S.SNP.2:19471423 chr02:019471423 0 W/19471423-19471423 FN1552-S SNP T -> C AC=1;AN=188;BQB=0.402235;DP=3710;DP4=1852,1828,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000466416;MQSB=0.937232;RPB=0.999889;SGB=21.8113;VDB=0.401367;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.2:19471436 chr02:019471436 0 W/19471436-19471436 W247-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3793-S.SNP.2:19473003 chr02:019473003 0 W/19473003-19473003 FN3793-S SNP A -> C AC=1;AN=190;BQB=0.803812;DP=2835;DP4=1300,1388,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.86815e-11;MQSB=0.825464;RPB=0.971532;SGB=50.3161;VDB=0.976994;EFF=INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|3|1) FN2537-S.SNP.2:19475055 chr02:019475055 0 W/19475055-19475055 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.904521;DP=4307;DP4=2019,1893,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.41764e-14;MQSB=0.995882;RPB=0.0218443;SGB=28.4908;VDB=0.574855;EFF=INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|2|1) FN828-S.SNP.2:19476327 chr02:019476327 0 W/19476327-19476327 FN828-S Single Base Substitution C-T INTRON HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3521-S.SNP.2:19479248 chr02:019479248 0 W/19479248-19479248 FN3521-S SNP A -> C AC=1;AN=188;BQB=0.99978;DP=3095;DP4=1383,1590,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02708e-06;MQSB=0.997873;RPB=0.955403;SGB=48.979;VDB=0.0449036;EFF=INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|2|1) FN2434.SNP.2:19485757 chr02:019485757 0 W/19485757-19485757 FN2434 SNP G -> T AC=2;AN=200;BQB=0.626047;DP=4364;DP4=1752,2303,10,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.80837e-17;MQSB=0.999308;RPB=0.380871;SGB=55.5366;VDB=0.20978;EFF=SPLICE_SITE_REGION(LOW||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1),INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1) FN2434.SNP.2:19485758 chr02:019485758 0 W/19485758-19485758 FN2434 SNP A -> T AC=2;AN=200;BQB=0.449737;DP=4366;DP4=1681,2262,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.11963e-15;MQSB=0.988759;RPB=0.0564872;SGB=-4.63785;VDB=0.0427153;EFF=SPLICE_SITE_REGION(LOW||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1),INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1) FN2434.SNP.2:19485761 chr02:019485761 0 W/19485761-19485761 FN2434 SNP C -> T AC=2;AN=200;BQB=0.890797;DP=4362;DP4=1754,2318,9,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.31746e-17;MQSB=0.987158;RPB=0.247724;SGB=87.1368;VDB=0.182497;EFF=SPLICE_SITE_REGION(LOW||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1),INTRON(MODIFIER||||252|LOC_Os02g32814|protein_coding|CODING|LOC_Os02g32814.1|1|1) FN428-S.SNP.2:19493815 chr02:019493815 0 W/19493815-19493815 FN428-S Single Base Substitution C-G INTERGENIC HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1419-S.SNP.2:19497406 chr02:019497406 0 W/19497406-19497406 FN1419-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1720-S.SNP.2:19498208 chr02:019498208 0 W/19498208-19498208 FN1720-S SNP C -> T AC=1;AN=188;BQB=0.593503;DP=3445;DP4=1230,2133,9,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.74266e-13;MQSB=0.985292;RPB=0.936914;SGB=-8.48022;VDB=0.839337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.2:19501098 chr02:019501098 0 W/19501098-19501098 FN2784-S SNP T -> A AC=1;AN=198;BQB=0.641689;DP=4256;DP4=1787,2184,9,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.26764e-17;MQSB=0.974035;RPB=0.97522;SGB=70.8662;VDB=0.956522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.2:19511252 chr02:019511252 0 W/19511252-19511252 FN3378-S SNP A -> G AC=2;AN=184;BQB=0.896362;DP=2887;DP4=1425,1363,18,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.2991e-16;MQSB=0.966615;RPB=0.999411;SGB=121.091;VDB=0.9488;EFF=INTRON(MODIFIER||||831|LOC_Os02g32860|protein_coding|CODING|LOC_Os02g32860.1|13|1) FN-185.SNP.2:19516162 chr02:019516162 0 W/19516162-19516162 FN-185 Single Base Substitution A-T INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN-268.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN-268 Single Base Substitution C-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1033-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN1033-S Single Base Substitution C-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1255-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN1255-S Single Base Substitution C-T INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2142-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN2142-S SNP C -> T AC=1;AN=168;BQB=0.830927;DP=1329;DP4=815,461,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0158014;MQB=0.431212;MQSB=1.14087e-09;RPB=0.553378;SGB=14.1641;VDB=0.052865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN2209-S SNP C -> T AC=2;AN=190;BQB=0.797207;DP=2877;DP4=1106,1467,9,11;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00312826;MQB=0.0039855;MQSB=6.45678e-08;RPB=0.787483;SGB=85.5263;VDB=0.457878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN2362 SNP C -> T AC=2;AN=192;BQB=0.979676;DP=4672;DP4=2193,2081,17,16;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00214041;MQB=6.52512e-06;MQSB=0.356438;RPB=0.845057;SGB=107.503;VDB=0.309421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN2415 SNP C -> T AC=1;AN=200;BQB=0.78846;DP=3075;DP4=1184,1649,3,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00390244;MQB=0.0173579;MQSB=0.00027286;RPB=0.990996;SGB=40.4492;VDB=0.637028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN2657-S SNP C -> T AC=2;AN=200;BQB=0.507758;DP=4417;DP4=2090,1933,29,34;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00158479;MQB=8.30551e-16;MQSB=0.865063;RPB=0.56078;SGB=278.926;VDB=0.614375;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.869072;DP=3561;DP4=1915,1512,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00084246;MQB=0.00134359;MQSB=0.0602215;RPB=0.999619;SGB=39.699;VDB=0.121318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.999996;DP=2117;DP4=1127,869,13,6;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.000944733;MQB=3.23172e-05;MQSB=0.00291289;RPB=0.939533;SGB=77.6532;VDB=0.844396;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.2:19517941 chr02:019517941 0 W/19517941-19517941 FN679-S Single Base Substitution C-T INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN4090-S.SNP.2:19521862 chr02:019521862 0 W/19521862-19521862 FN4090-S SNP G -> A AC=1;AN=182;BQB=0.52146;DP=2726;DP4=1501,1133,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000733676;MQB=3.69495e-07;MQSB=0.00916213;RPB=0.65518;SGB=46.1603;VDB=0.127768;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R45Q|638|LOC_Os02g32870|protein_coding|CODING|LOC_Os02g32870.1|1|1) FN-174.SNP.2:19522558 chr02:019522558 0 W/19522558-19522558 FN-174 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g32870 retrotransposon protein, putative, unclassified, expressed SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN260-S.SNP.2:19529837 chr02:019529837 0 W/19529837-19529837 FN260-S Single Base Substitution A-T INTRON HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3827-S.SNP.2:19532638 chr02:019532638 0 W/19532638-19532638 FN3827-S SNP G -> A AC=1;AN=190;BQB=0.982184;DP=2822;DP4=1426,1313,2,12;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0747697;MQB=0.359654;MQSB=1.95607e-05;RPB=0.819814;SGB=58.2031;VDB=0.419688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H733Y|2185|LOC_Os02g32880|protein_coding|CODING|LOC_Os02g32880.1|11|1) FN3919-S.SNP.2:19543118 chr02:019543118 0 W/19543118-19543118 FN3919-S SNP A -> G AC=1;AN=158;BQB=0.942495;DP=2688;DP4=1192,1383,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.89283e-08;MQSB=0.831531;RPB=0.336863;SGB=47.5512;VDB=0.130817;EFF=UTR_5_PRIME(MODIFIER||10||256|LOC_Os02g32910|protein_coding|CODING|LOC_Os02g32910.1|1|1) FN1028-S.SNP.2:19545597 chr02:019545597 0 W/19545597-19545597 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN4090-S.SNP.2:19554705 chr02:019554705 0 W/19554705-19554705 FN4090-S SNP A -> T AC=1;AN=182;BQB=0.997472;DP=2782;DP4=1344,1338,10,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.97836e-11;MQSB=0.986729;RPB=0.051309;SGB=33.1875;VDB=0.760876;EFF=INTRON(MODIFIER||||423|LOC_Os02g32930|protein_coding|CODING|LOC_Os02g32930.1|11|1) FN708-S.SNP.2:19554991 chr02:019554991 0 W/19554991-19554991 FN708-S Single Base Substitution T-G INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3413-S.SNP.2:19558608 chr02:019558608 0 W/19558608-19558608 FN3413-S SNP G -> T AC=1;AN=184;BQB=0.923539;DP=2200;DP4=1080,1022,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68823e-09;MQSB=0.140673;RPB=0.99975;SGB=66.8296;VDB=0.82696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.2:19561041 chr02:019561041 0 W/19561041-19561041 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.787748;DP=2827;DP4=1318,1422,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.92978e-09;MQSB=0.990034;RPB=0.963518;SGB=35.7479;VDB=0.474283;EFF=INTRON(MODIFIER||||289|LOC_Os02g32940|protein_coding|CODING|LOC_Os02g32940.1|5|1) FN496-S.SNP.2:19565336 chr02:019565336 0 W/19565336-19565336 FN496-S Single Base Substitution G-A INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1099-S.SNP.2:19567243 chr02:019567243 0 W/19567243-19567243 FN1099-S Single Base Substitution G-A INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN581-S.SNP.2:19575897 chr02:019575897 0 W/19575897-19575897 FN581-S Single Base Substitution T-C INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2110-S.SNP.2:19584894 chr02:019584894 0 W/19584894-19584894 FN2110-S SNP G -> A AC=1;AN=166;BQB=0.00442096;DP=1492;DP4=743,702,4,10;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=0.000485777;MQSB=0.875288;RPB=0.686406;SGB=-35.5206;VDB=0.939668;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P112|210|LOC_Os02g32960|protein_coding|CODING|LOC_Os02g32960.1|2|1) FN-310.SNP.2:19588572 chr02:019588572 0 W/19588572-19588572 FN-310 Single Base Substitution T-C INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN3981-S.SNP.2:19591192 chr02:019591192 0 W/19591192-19591192 FN3981-S SNP T -> A AC=1;AN=168;BQB=0.901226;DP=2671;DP4=1285,1208,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.49137e-10;MQSB=0.99945;RPB=0.882085;SGB=9.91396;VDB=0.901409;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.2:19603350 chr02:019603350 0 W/19603350-19603350 FN995-S Single Base Substitution C-T INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN438-S.SNP.2:19605954 chr02:019605954 0 W/19605954-19605954 FN438-S Single Base Substitution T-A INTERGENIC HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2162-S.SNP.2:19606234 chr02:019606234 0 W/19606234-19606234 FN2162-S SNP C -> T AC=1;AN=168;BQB=0.392191;DP=3748;DP4=1862,1810,13,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.12298e-14;MQSB=0.979581;RPB=0.347212;SGB=-123.754;VDB=0.987515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.2:19609949 chr02:019609949 0 W/19609949-19609949 FN3319-S SNP G -> A AC=2;AN=184;BQB=0.987866;DP=3029;DP4=1171,1757,5,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.52789e-13;MQSB=0.865496;RPB=0.623322;SGB=98.4821;VDB=0.401776;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.2:19616304 chr02:019616304 0 W/19616304-19616304 FN4070-S SNP A -> G AC=1;AN=182;BQB=0.559751;DP=2675;DP4=1174,1431,6,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.56724e-08;MQSB=0.932559;RPB=0.941157;SGB=5.1496;VDB=0.511745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.2:19618883 chr02:019618883 0 W/19618883-19618883 FN2339 SNP A -> G AC=2;AN=192;BQB=0.782252;DP=4596;DP4=2281,1913,21,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.11502e-18;MQSB=0.938053;RPB=0.90833;SGB=80.2009;VDB=0.0725481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.2:19622341 chr02:019622341 0 W/19622341-19622341 FN2546-S SNP G -> A AC=1;AN=198;BQB=0.709659;DP=4207;DP4=1951,2018,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.21024e-07;MQSB=0.757286;RPB=0.998047;SGB=44.9538;VDB=0.772939;EFF=INTRON(MODIFIER||||391|LOC_Os02g33000|protein_coding|CODING|LOC_Os02g33000.1|2|1) FN1072-S.SNP.2:19625120 chr02:019625120 0 W/19625120-19625120 FN1072-S Single Base Substitution G-T INTRON HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1072-S.SNP.2:19625123 chr02:019625123 0 W/19625123-19625123 FN1072-S Single Base Substitution T-A INTRON HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3701-S.SNP.2:19631945 chr02:019631945 0 W/19631945-19631945 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.545987;DP=2601;DP4=1031,1444,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00153787;MQB=0.265816;MQSB=0.879106;RPB=0.472295;SGB=32.5467;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.2:19637963 chr02:019637963 0 W/19637963-19637963 FN-144 Single Base Substitution T-A INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1219-S.SNP.2:19638239 chr02:019638239 0 W/19638239-19638239 FN1219-S Single Base Substitution T-A INTRON HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2472.SNP.2:19640161 chr02:019640161 0 W/19640161-19640161 FN2472 SNP T -> A AC=2;AN=200;BQB=0.378591;DP=4689;DP4=2095,2266,26,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.01516e-33;MQSB=0.93109;RPB=0.0388013;SGB=195.292;VDB=0.106904;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.2:19640875 chr02:019640875 0 W/19640875-19640875 FN4002-S SNP C -> T AC=2;AN=168;BQB=0.684017;DP=2576;DP4=1184,1278,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.10846e-12;MQSB=0.979009;RPB=0.995341;SGB=41.6313;VDB=0.622486;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.2:19643507 chr02:019643507 0 W/19643507-19643507 FN821-S Single Base Substitution A-C INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN542-S.SNP.2:19646849 chr02:019646849 0 W/19646849-19646849 FN542-S Single Base Substitution A-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN322-S.SNP.2:19670790 chr02:019670790 0 W/19670790-19670790 FN322-S Single Base Substitution A-G INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2310.SNP.2:19675958 chr02:019675958 0 W/19675958-19675958 FN2310 SNP T -> C AC=1;AN=192;BQB=0.772464;DP=5133;DP4=2294,2450,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194818;MQB=1.28108e-14;MQSB=0.988669;RPB=0.765939;SGB=21.4339;VDB=0.358337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.2:19678943 chr02:019678943 0 W/19678943-19678943 FN2449 SNP A -> G AC=1;AN=200;BQB=0.453719;DP=5032;DP4=2435,2350,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64453e-06;MQSB=0.999761;RPB=0.85406;SGB=4.67442;VDB=0.409321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.2:19682271 chr02:019682271 0 W/19682271-19682271 FN1600-S Single Base Substitution T-A INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3591-S.SNP.2:19682272 chr02:019682272 0 W/19682272-19682272 FN3591-S SNP A -> T AC=2;AN=188;BQB=0.960306;DP=3182;DP4=1741,1311,12,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000314268;MQB=4.84079e-16;MQSB=0.75713;RPB=0.607013;SGB=126.215;VDB=0.763823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.2:19702646 chr02:019702646 0 W/19702646-19702646 FN2146-S SNP A -> T AC=1;AN=168;BQB=0.550604;DP=2821;DP4=1118,1672,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.9792e-08;MQSB=0.944014;RPB=0.43863;SGB=5.62151;VDB=0.587726;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.2:19702647 chr02:019702647 0 W/19702647-19702647 FN2146-S SNP A -> T AC=1;AN=168;BQB=0.95402;DP=2837;DP4=1123,1684,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.57314e-08;MQSB=0.968988;RPB=0.135384;SGB=24.6155;VDB=0.419237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.2:19706535 chr02:019706535 0 W/19706535-19706535 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.8291;DP=2194;DP4=1154,986,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74205e-10;MQSB=0.929685;RPB=0.974395;SGB=39.2004;VDB=0.545447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.2:19720150 chr02:019720150 0 W/19720150-19720150 FN2200-S SNP T -> C AC=1;AN=190;BQB=0.904654;DP=5395;DP4=2340,2753,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87242e-09;MQSB=0.988763;RPB=0.510248;SGB=71.8647;VDB=0.112983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.2:19720733 chr02:019720733 0 W/19720733-19720733 FN3528-S SNP A -> G AC=2;AN=188;BQB=0.984986;DP=2735;DP4=1328,1301,20,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.54821e-24;MQSB=0.97182;RPB=0.371826;SGB=180.734;VDB=0.0686468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.2:19731330 chr02:019731330 0 W/19731330-19731330 FN1687-S SNP T -> C AC=1;AN=188;BQB=0.821349;DP=3460;DP4=1665,1747,13,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.05934e-14;MQSB=0.994205;RPB=0.715488;SGB=-7.39363;VDB=0.315452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.2:19732532 chr02:019732532 0 W/19732532-19732532 FN2113-S SNP T -> C AC=2;AN=166;BQB=0.164655;DP=1722;DP4=677,987,8,14;HOB=0.0238061;ICB=0.494049;MQ=48;MQ0F=0;MQB=7.36473e-09;MQSB=0.899788;RPB=0.869646;SGB=39.2004;VDB=0.389222;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.2:19736330 chr02:019736330 0 W/19736330-19736330 FN1082-S Single Base Substitution C-T INTERGENIC HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN768-S.SNP.2:19737499 chr02:019737499 0 W/19737499-19737499 FN768-S Single Base Substitution C-T INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2639-S.SNP.2:19738335 chr02:019738335 0 W/19738335-19738335 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.777314;DP=4954;DP4=2506,2205,13,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00363343;MQB=2.30951e-05;MQSB=6.15815e-10;RPB=0.869925;SGB=47.7211;VDB=0.836179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:19743605 chr02:019743605 0 W/19743605-19743605 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.00502724;DP=5303;DP4=2553,2473,20,14;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=2.05776e-10;MQSB=0.00466166;RPB=0.148675;SGB=150.973;VDB=0.878597;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R307*|603|LOC_Os02g33210|protein_coding|CODING|LOC_Os02g33210.1|2|1);LOF=(LOC_Os02g33210|LOC_Os02g33210|1|1.00);NMD=(LOC_Os02g33210|LOC_Os02g33210|1|1.00) FN429-S.SNP.2:19744260 chr02:019744260 0 W/19744260-19744260 FN429-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1190-S.SNP.2:19745141 chr02:019745141 0 W/19745141-19745141 FN1190-S Single Base Substitution C-A INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1197-S.SNP.2:19754013 chr02:019754013 0 W/19754013-19754013 FN1197-S Single Base Substitution T-C INTRON HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2219-S.SNP.2:19767925 chr02:019767925 0 W/19767925-19767925 FN2219-S SNP T -> C AC=1;AN=190;BQB=0.510988;DP=4590;DP4=2213,1950,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00575874;MQSB=0.194706;RPB=0.794187;SGB=36.1006;VDB=0.245929;EFF=INTRON(MODIFIER||||597|LOC_Os02g33260|protein_coding|CODING|LOC_Os02g33260.1|1|1) FN4094-S.SNP.2:19773660 chr02:019773660 0 W/19773660-19773660 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.920945;DP=3611;DP4=1980,1477,26,3;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.0296317;MQB=2.71683e-06;MQSB=9.22667e-14;RPB=0.00421572;SGB=-377.273;VDB=0.0305803;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.2:19776627 chr02:019776627 0 W/19776627-19776627 FN4065-S SNP C -> A AC=1;AN=168;BQB=0.924432;DP=3282;DP4=1736,1400,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=2.25524e-06;MQSB=0.794585;RPB=0.761489;SGB=38.1788;VDB=0.863054;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G930*|1311|LOC_Os02g33280|protein_coding|CODING|LOC_Os02g33280.1|6|1);LOF=(LOC_Os02g33280|LOC_Os02g33280|1|1.00);NMD=(LOC_Os02g33280|LOC_Os02g33280|1|1.00) FN869-S.SNP.2:19792347 chr02:019792347 0 W/19792347-19792347 FN869-S Single Base Substitution C-T INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN4122-S.SNP.2:19803551 chr02:019803551 0 W/19803551-19803551 FN4122-S SNP C -> T AC=1;AN=182;BQB=0.98502;DP=2772;DP4=1209,1451,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=8.04226e-10;MQSB=0.539563;RPB=0.997901;SGB=35.6984;VDB=0.389733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.2:19807861 chr02:019807861 0 W/19807861-19807861 FN2617-S SNP A -> T AC=1;AN=198;BQB=0.749811;DP=4219;DP4=2129,1822,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.50917e-10;MQSB=0.000484506;RPB=0.755193;SGB=86.3098;VDB=0.907481;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.2:19811708 chr02:019811708 0 W/19811708-19811708 FN369-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g33340 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN729-S.SNP.2:19812586 chr02:019812586 0 W/19812586-19812586 FN729-S Single Base Substitution G-A INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1228-S.SNP.2:19813461 chr02:019813461 0 W/19813461-19813461 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3804-S.SNP.2:19813515 chr02:019813515 0 W/19813515-19813515 FN3804-S SNP C -> A AC=2;AN=190;BQB=0.500734;DP=3260;DP4=1398,1730,23,19;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=0.000167252;MQSB=0.000525442;RPB=0.401584;SGB=185.712;VDB=0.198301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.2:19817512 chr02:019817512 0 W/19817512-19817512 FN3869-S SNP T -> C AC=2;AN=158;BQB=0.382774;DP=2383;DP4=1169,1119,11,4;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.155e-07;MQSB=0.998771;RPB=0.999791;SGB=40.8124;VDB=0.0617131;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.2:19827086 chr02:019827086 0 W/19827086-19827086 FN4068-S SNP C -> T AC=2;AN=182;BQB=0.961587;DP=2768;DP4=1379,1281,14,27;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=1.89955e-15;MQSB=0.00144996;RPB=0.536757;SGB=88.4264;VDB=0.216253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.2:19834535 chr02:019834535 0 W/19834535-19834535 FN3663-S SNP A -> G AC=1;AN=190;BQB=0.884167;DP=2155;DP4=1040,956,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00019352;MQSB=0.997579;RPB=0.68056;SGB=18.3316;VDB=0.398764;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H58R|183|LOC_Os02g33380|protein_coding|CODING|LOC_Os02g33380.1|1|1) FN-89.SNP.2:19836953 chr02:019836953 0 W/19836953-19836953 FN-89 Single Base Substitution T-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2612-S.SNP.2:19841183 chr02:019841183 0 W/19841183-19841183 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.897917;DP=4075;DP4=1831,2055,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000110757;MQSB=0.930462;RPB=0.175334;SGB=58.1246;VDB=0.338999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.2:19855132 chr02:019855132 0 W/19855132-19855132 FN3675-S SNP G -> A AC=2;AN=190;BQB=0.75631;DP=2066;DP4=655,1329,5,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.75947e-06;MQSB=0.112286;RPB=0.52106;SGB=28.9929;VDB=0.721802;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.2:19868282 chr02:019868282 0 W/19868282-19868282 FN-283 Single Base Substitution A-G UTR_3_PRIME HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2429.SNP.2:19871651 chr02:019871651 0 W/19871651-19871651 FN2429 SNP C -> G AC=2;AN=200;BQB=0.871863;DP=5035;DP4=2543,2163,28,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.49104e-31;MQSB=0.923003;RPB=0.857785;SGB=70.4864;VDB=0.860534;EFF=UTR_5_PRIME(MODIFIER||72||416|LOC_Os02g33430|protein_coding|CODING|LOC_Os02g33430.2|1|1),INTRON(MODIFIER||||475|LOC_Os02g33430|protein_coding|CODING|LOC_Os02g33430.1|1|1) FN1196-S.SNP.2:19872401 chr02:019872401 0 W/19872401-19872401 FN1196-S Single Base Substitution A-G INTRON HOMO SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN2785-S.SNP.2:19878326 chr02:019878326 0 W/19878326-19878326 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.909479;DP=4322;DP4=2122,2018,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=0.0792627;MQSB=0.592896;RPB=0.377569;SGB=40.149;VDB=0.364583;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E119*|125|LOC_Os02g33440|protein_coding|CODING|LOC_Os02g33440.1|2|1) FN731-S.SNP.2:19883002 chr02:019883002 0 W/19883002-19883002 FN731-S Single Base Substitution T-A INTRON HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN731-S.SNP.2:19883003 chr02:019883003 0 W/19883003-19883003 FN731-S Single Base Substitution T-A INTRON HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN731-S.SNP.2:19883005 chr02:019883005 0 W/19883005-19883005 FN731-S Single Base Substitution G-A INTRON HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN731-S.SNP.2:19883448 chr02:019883448 0 W/19883448-19883448 FN731-S Single Base Substitution A-T INTRON HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN474-S.SNP.2:19886019 chr02:019886019 0 W/19886019-19886019 FN474-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2293.SNP.2:19891413 chr02:019891413 0 W/19891413-19891413 FN2293 SNP A -> G AC=1;AN=192;BQB=0.403465;DP=5064;DP4=2206,2595,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.53294e-08;MQSB=0.605044;RPB=0.902207;SGB=5.79046;VDB=0.941747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.2:19894239 chr02:019894239 0 W/19894239-19894239 FN1322-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3579-S.SNP.2:19894432 chr02:019894432 0 W/19894432-19894432 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.834691;DP=2760;DP4=1364,1320,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0;MQB=2.5362e-05;MQSB=0.290638;RPB=0.742797;SGB=67.1521;VDB=0.831558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.2:19898560 chr02:019898560 0 W/19898560-19898560 FN3557-S SNP G -> C AC=1;AN=188;BQB=0.999139;DP=3126;DP4=1307,1727,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16214e-11;MQSB=0.998244;RPB=0.173906;SGB=98.9552;VDB=0.124369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G774A|874|LOC_Os02g33460|protein_coding|CODING|LOC_Os02g33460.1|3|1) FN1422-S.SNP.2:19900701 chr02:019900701 0 W/19900701-19900701 FN1422-S Single Base Substitution C-T INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN453-S.SNP.2:19912048 chr02:019912048 0 W/19912048-19912048 FN453-S Single Base Substitution G-A INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2310.SNP.2:19917690 chr02:019917690 0 W/19917690-19917690 FN2310 SNP C -> T AC=2;AN=192;BQB=0.711283;DP=5138;DP4=2344,2483,30,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.62226e-36;MQSB=0.901088;RPB=0.98091;SGB=-57.1104;VDB=0.321152;EFF=INTRON(MODIFIER||||799|LOC_Os02g33490|protein_coding|CODING|LOC_Os02g33490.1|6|1) FN3681-S.SNP.2:19920090 chr02:019920090 0 W/19920090-19920090 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.954122;DP=2913;DP4=1445,1360,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44353e-08;MQSB=0.672887;RPB=0.293238;SGB=53.6492;VDB=0.792118;EFF=INTRON(MODIFIER||||799|LOC_Os02g33490|protein_coding|CODING|LOC_Os02g33490.1|2|1) FN544-S.SNP.2:19925029 chr02:019925029 0 W/19925029-19925029 FN544-S Single Base Substitution C-A INTRON HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN506-S.SNP.2:19929247 chr02:019929247 0 W/19929247-19929247 FN506-S Single Base Substitution T-C INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. 701-2.SNP.2:19929551 chr02:019929551 0 W/19929551-19929551 701-2 Single Base Substitution C-A INTERGENIC Homo SNo: 1436, Mutant_ID: 701-2, Generation: M2, Mutations: 21, Genes: 34, Seed availability: Yes. FN2115-S.SNP.2:19934262 chr02:019934262 0 W/19934262-19934262 FN2115-S SNP T -> G AC=1;AN=168;BQB=0.00112956;DP=2891;DP4=1762,1078,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0162574;MQB=0.000236822;MQSB=2.89579e-05;RPB=0.776435;SGB=-42.3508;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.2:19939390 chr02:019939390 0 W/19939390-19939390 FN3395-S SNP T -> G AC=1;AN=184;BQB=0.87911;DP=3216;DP4=1569,1517,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.9636e-11;MQSB=0.98986;RPB=0.269726;SGB=71.3514;VDB=0.823796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E688D|694|LOC_Os02g33530|protein_coding|CODING|LOC_Os02g33530.1|4|1) FN1641-S.SNP.2:19940608 chr02:019940608 0 W/19940608-19940608 FN1641-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g33530 retrotransposon protein, putative, unclassified, expressed SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN1579-S.SNP.2:19947577 chr02:019947577 0 W/19947577-19947577 FN1579-S Single Base Substitution A-C INTRON HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2617-S.SNP.2:19955289 chr02:019955289 0 W/19955289-19955289 FN2617-S SNP G -> A AC=1;AN=198;BQB=0.987621;DP=3709;DP4=1819,1728,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.06812e-10;MQSB=0.956901;RPB=0.821883;SGB=47.3393;VDB=0.530692;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L74|224|LOC_Os02g33550|protein_coding|CODING|LOC_Os02g33550.1|1|1) FN2387.SNP.2:19963858 chr02:019963858 0 W/19963858-19963858 FN2387 SNP T -> C AC=2;AN=192;BQB=0.986183;DP=5016;DP4=2222,2384,32,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.87739e-39;MQSB=0.976924;RPB=0.564823;SGB=164.824;VDB=0.550196;EFF=INTRON(MODIFIER||||326|LOC_Os02g33560|protein_coding|CODING|LOC_Os02g33560.1|4|1) FN2097-S.SNP.2:19968452 chr02:019968452 0 W/19968452-19968452 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.114829;DP=3899;DP4=2291,1540,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.130353;MQSB=0.937889;RPB=0.999595;SGB=-85.2162;VDB=0.626288;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.2:19987402 chr02:019987402 0 W/19987402-19987402 FN3797-S SNP T -> C AC=1;AN=190;BQB=0.677521;DP=2603;DP4=1325,1130,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.36512e-07;MQSB=0.983715;RPB=0.814078;SGB=2.55724;VDB=0.97531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.2:19994897 chr02:019994897 0 W/19994897-19994897 FN1229-S Single Base Substitution G-C INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN-180.SNP.2:19996147 chr02:019996147 0 W/19996147-19996147 FN-180 Single Base Substitution T-C INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN1237-S.SNP.2:20015412 chr02:020015412 0 W/20015412-20015412 FN1237-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2495.SNP.2:20017161 chr02:020017161 0 W/20017161-20017161 FN2495 SNP C -> T AC=1;AN=200;BQB=0.895649;DP=4694;DP4=1812,2455,8,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.0239006;MQSB=0.517808;RPB=0.854678;SGB=36.6644;VDB=0.610232;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T23|1013|LOC_Os02g33620|protein_coding|CODING|LOC_Os02g33620.1|1|1) FN2652-S.SNP.2:20017290 chr02:020017290 0 W/20017290-20017290 FN2652-S SNP G -> T AC=1;AN=200;BQB=0.767377;DP=4659;DP4=1810,2534,20,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.01557e-13;MQSB=0.288452;RPB=0.0965799;SGB=-1.00683;VDB=0.000674187;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A66|1013|LOC_Os02g33620|protein_coding|CODING|LOC_Os02g33620.1|1|1) FN1675-S.SNP.2:20017975 chr02:020017975 0 W/20017975-20017975 FN1675-S SNP G -> A AC=2;AN=188;BQB=0.907189;DP=1432;DP4=784,589,10,7;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=3.70424e-08;MQSB=0.639899;RPB=0.82134;SGB=71.6954;VDB=0.634609;EFF=INTRON(MODIFIER||||1013|LOC_Os02g33620|protein_coding|CODING|LOC_Os02g33620.1|1|1) FN3375-S.SNP.2:20018994 chr02:020018994 0 W/20018994-20018994 FN3375-S SNP C -> A AC=1;AN=184;BQB=0.801581;DP=3668;DP4=1487,2088,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00473677;MQSB=0.705606;RPB=0.893106;SGB=48.7425;VDB=0.0739286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N323K|1013|LOC_Os02g33620|protein_coding|CODING|LOC_Os02g33620.1|3|1) FN2218-S.SNP.2:20024278 chr02:020024278 0 W/20024278-20024278 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.954913;DP=5026;DP4=2348,2301,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=8.44358e-07;MQSB=0.00109717;RPB=0.265996;SGB=19.6499;VDB=0.822825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.2:20041298 chr02:020041298 0 W/20041298-20041298 FN1426-S Single Base Substitution G-T INTRON HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN-241.SNP.2:20042664 chr02:020042664 0 W/20042664-20042664 FN-241 Single Base Substitution T-A INTRON HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2561-S.SNP.2:20043475 chr02:020043475 0 W/20043475-20043475 FN2561-S SNP G -> A AC=1;AN=198;BQB=0.545582;DP=3683;DP4=1892,1604,4,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000336046;MQSB=0.843936;RPB=0.502863;SGB=21.981;VDB=0.149847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.2:20046604 chr02:020046604 0 W/20046604-20046604 FN1221-S Single Base Substitution G-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1257-S.SNP.2:20063011 chr02:020063011 0 W/20063011-20063011 FN1257-S Single Base Substitution G-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1455-S.SNP.2:20065076 chr02:020065076 0 W/20065076-20065076 FN1455-S Single Base Substitution A-T INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN951-S.SNP.2:20065538 chr02:020065538 0 W/20065538-20065538 FN951-S Single Base Substitution A-C INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3356-S.SNP.2:20071786 chr02:020071786 0 W/20071786-20071786 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.571019;DP=4245;DP4=1291,2830,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.508363;MQB=0.271795;MQSB=0;RPB=0.387034;SGB=89.4385;VDB=0.377544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3937-S.SNP.2:20078481 chr02:020078481 0 W/20078481-20078481 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.503258;DP=2470;DP4=1135,1195,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.27384e-05;MQSB=0.999179;RPB=0.324077;SGB=34.0735;VDB=0.355085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.2:20096889 chr02:020096889 0 W/20096889-20096889 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.999616;DP=3154;DP4=1459,1594,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.00709e-10;MQSB=0.999257;RPB=0.998808;SGB=71.3514;VDB=0.182506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.2:20098131 chr02:020098131 0 W/20098131-20098131 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.971482;DP=3755;DP4=1670,1963,11,22;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000266312;MQB=7.13858e-19;MQSB=0.958134;RPB=0.874062;SGB=143.7;VDB=0.678892;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.2:20098711 chr02:020098711 0 W/20098711-20098711 FN4203-S SNP C -> T AC=2;AN=170;BQB=0.977378;DP=2308;DP4=983,1184,14,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.87115e-13;MQSB=0.893991;RPB=0.572568;SGB=92.2986;VDB=0.803641;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.2:20101805 chr02:020101805 0 W/20101805-20101805 FN337-S Single Base Substitution C-T INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3899-S.SNP.2:20103852 chr02:020103852 0 W/20103852-20103852 FN3899-S SNP C -> T AC=1;AN=158;BQB=0.423142;DP=2719;DP4=1401,1236,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.567e-07;MQSB=0.998854;RPB=0.55199;SGB=28.5576;VDB=0.827646;EFF=INTRON(MODIFIER||||158|LOC_Os02g33700|protein_coding|CODING|LOC_Os02g33700.1|1|1) FN2310.SNP.2:20112803 chr02:020112803 0 W/20112803-20112803 FN2310 SNP G -> T AC=2;AN=192;BQB=0.977508;DP=5090;DP4=2480,2268,24,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78123e-22;MQSB=0.685081;RPB=0.111013;SGB=0.468728;VDB=0.126511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.2:20114884 chr02:020114884 0 W/20114884-20114884 FN2498 SNP C -> T AC=1;AN=200;BQB=0.641395;DP=4010;DP4=2319,1341,8,4;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0361596;MQB=0.963883;MQSB=0.829861;RPB=0.86578;SGB=16.4591;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.2:20119066 chr02:020119066 0 W/20119066-20119066 W463-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN948-S.SNP.2:20133460 chr02:020133460 0 W/20133460-20133460 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN-183.SNP.2:20137359 chr02:020137359 0 W/20137359-20137359 FN-183 Single Base Substitution C-T INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3523-S.SNP.2:20138267 chr02:020138267 0 W/20138267-20138267 FN3523-S SNP T -> C AC=1;AN=188;BQB=0.955152;DP=2543;DP4=1191,1295,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23196e-05;MQSB=0.994872;RPB=0.980059;SGB=39.8925;VDB=0.594064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I586M|858|LOC_Os02g33750|protein_coding|CODING|LOC_Os02g33750.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I586M|815|LOC_Os02g33750|protein_coding|CODING|LOC_Os02g33750.2|2|1) FN2374.SNP.2:20145611 chr02:020145611 0 W/20145611-20145611 FN2374 SNP C -> T AC=1;AN=192;BQB=0.474629;DP=4610;DP4=1769,2587,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.58163e-09;MQSB=0.829479;RPB=0.790677;SGB=-12.5113;VDB=0.0845376;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.2:20146861 chr02:020146861 0 W/20146861-20146861 FN-392 Single Base Substitution C-T INTERGENIC HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN-117.SNP.2:20147117 chr02:020147117 0 W/20147117-20147117 FN-117 Single Base Substitution G-A INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN2625-S.SNP.2:20153328 chr02:020153328 0 W/20153328-20153328 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.959628;DP=4943;DP4=2297,2220,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4817e-15;MQSB=0.727672;RPB=0.936327;SGB=114.132;VDB=0.304491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G167S|316|LOC_Os02g33780|protein_coding|CODING|LOC_Os02g33780.1|2|1) FN2625-S.SNP.2:20153329 chr02:020153329 0 W/20153329-20153329 FN2625-S SNP G -> C AC=1;AN=200;BQB=0.966022;DP=4936;DP4=2139,2096,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.81496e-15;MQSB=0.614417;RPB=0.707559;SGB=71.1676;VDB=0.23085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G167A|316|LOC_Os02g33780|protein_coding|CODING|LOC_Os02g33780.1|2|1) FN4156-S.SNP.2:20155701 chr02:020155701 0 W/20155701-20155701 FN4156-S SNP C -> A AC=1;AN=170;BQB=0.378743;DP=2633;DP4=1290,1263,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.34199e-08;MQSB=0.923016;RPB=0.830273;SGB=55.5339;VDB=0.666859;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.2:20157162 chr02:020157162 0 W/20157162-20157162 FN986-S Single Base Substitution G-A INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1086-S.SNP.2:20161171 chr02:020161171 0 W/20161171-20161171 FN1086-S Single Base Substitution G-T INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2448.SNP.2:20163367 chr02:020163367 0 W/20163367-20163367 FN2448 SNP A -> G AC=1;AN=200;BQB=0.588929;DP=5052;DP4=2302,2480,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.61853e-06;MQSB=0.735578;RPB=0.752753;SGB=16.4591;VDB=0.11483;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.2:20164573 chr02:020164573 0 W/20164573-20164573 FN-202 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN_846-8-1.SNP.2:20185796 chr02:020185796 0 W/20185796-20185796 FN_846-8-1 Single Base Substitution A-C HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN1062-S.SNP.2:20192939 chr02:020192939 0 W/20192939-20192939 FN1062-S Single Base Substitution T-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1709-S.SNP.2:20195155 chr02:020195155 0 W/20195155-20195155 FN1709-S SNP A -> G AC=1;AN=188;BQB=0.816317;DP=2763;DP4=1243,1451,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000757302;MQSB=0.940408;RPB=0.992606;SGB=-17.1729;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.2:20198895 chr02:020198895 0 W/20198895-20198895 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.917007;DP=2758;DP4=980,1734,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05424e-10;MQSB=0.97653;RPB=0.971788;SGB=51.902;VDB=0.772785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.2:20199717 chr02:020199717 0 W/20199717-20199717 FN2325 SNP G -> T AC=1;AN=192;BQB=0.845189;DP=4543;DP4=2106,2196,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000220119;MQB=5.02938e-09;MQSB=5.29426e-06;RPB=0.45955;SGB=28.9139;VDB=0.904414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.2:20204588 chr02:020204588 0 W/20204588-20204588 FN1348-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3496-S.SNP.2:20209049 chr02:020209049 0 W/20209049-20209049 FN3496-S SNP G -> A AC=1;AN=188;BQB=0.0406009;DP=5275;DP4=3071,2074,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0557346;MQB=0.662327;MQSB=6.55387e-38;RPB=0.568144;SGB=31.1628;VDB=0.794297;EFF=INTRON(MODIFIER||||1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|1|1) FN2325.SNP.2:20210163 chr02:020210163 0 W/20210163-20210163 FN2325 SNP G -> A AC=1;AN=192;BQB=0.621685;DP=7172;DP4=3022,3605,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0858896;MQB=0.022787;MQSB=5.72418e-10;RPB=0.617203;SGB=-7.9965;VDB=0.425957;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q644|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|2|1) FN1114-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN1114-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2140-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.426394;DP=5193;DP4=2359,2752,28,14;HOB=7.08617e-05;ICB=0.000142567;MQ=25;MQ0F=0.157905;MQB=0.918866;MQSB=0.424351;RPB=0.569462;SGB=-5.03292;VDB=0.769355;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1422|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN2192-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.029623;DP=9160;DP4=4241,4167,29,20;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0503275;MQB=0.0260941;MQSB=4.34043e-37;RPB=0.269725;SGB=217.589;VDB=0.244222;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1422|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN2373.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN2373 SNP G -> A AC=1;AN=192;BQB=0.159271;DP=9132;DP4=4286,4202,22,28;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0566141;MQB=0.634259;MQSB=4.37569e-40;RPB=0.70696;SGB=168.097;VDB=0.0272105;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1422|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN2666-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.962582;DP=9141;DP4=4074,4470,31,33;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0532764;MQB=0.017766;MQSB=3.11161e-33;RPB=0.965085;SGB=220.528;VDB=0.806334;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1422|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN499-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN499-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN545-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN545-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN898-S.SNP.2:20212545 chr02:020212545 0 W/20212545-20212545 FN898-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3478-S.SNP.2:20212566 chr02:020212566 0 W/20212566-20212566 FN3478-S SNP A -> G AC=1;AN=184;BQB=0.850733;DP=5917;DP4=2426,3278,9,16;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0593206;MQB=0.000419818;MQSB=1.54959e-17;RPB=0.0482495;SGB=48.493;VDB=0.17647;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P1429|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN3883-S.SNP.2:20212566 chr02:020212566 0 W/20212566-20212566 FN3883-S SNP A -> G AC=1;AN=158;BQB=0.642996;DP=5010;DP4=2117,2700,10,13;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.0548902;MQB=0.002615;MQSB=2.33193e-19;RPB=0.814121;SGB=40.4048;VDB=0.758295;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P1429|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN3465-S.SNP.2:20212793 chr02:020212793 0 W/20212793-20212793 FN3465-S SNP C -> A AC=1;AN=184;BQB=0.995924;DP=4254;DP4=1548,2535,21,21;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0423131;MQB=0.327231;MQSB=0;RPB=0.891955;SGB=137.88;VDB=0.561338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S1505Y|1652|LOC_Os02g33910|protein_coding|CODING|LOC_Os02g33910.1|3|1) FN2685-S.SNP.2:20214321 chr02:020214321 0 W/20214321-20214321 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.664965;DP=5580;DP4=2574,2663,10,7;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.221864;MQB=0.356457;MQSB=1.9686e-22;RPB=0.870865;SGB=29.4849;VDB=0.899557;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.2:20214860 chr02:020214860 0 W/20214860-20214860 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2625-S.SNP.2:20217829 chr02:020217829 0 W/20217829-20217829 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.0102408;DP=4429;DP4=2287,1874,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.14541e-16;MQSB=0.500181;RPB=0.118274;SGB=87.1368;VDB=0.216821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.2:20218394 chr02:020218394 0 W/20218394-20218394 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.160274;DP=3125;DP4=1618,1468,10,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.71932e-12;MQSB=0.999923;RPB=0.712647;SGB=-74.3449;VDB=0.733999;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.2:20219669 chr02:020219669 0 W/20219669-20219669 FN1684-S SNP C -> G AC=2;AN=188;BQB=0.840433;DP=3551;DP4=1654,1829,21,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.63909e-22;MQSB=0.986016;RPB=0.918075;SGB=1.29908;VDB=0.214835;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.2:20222421 chr02:020222421 0 W/20222421-20222421 FN670-S Single Base Substitution G-C INTRON HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3806-S.SNP.2:20226475 chr02:020226475 0 W/20226475-20226475 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.822082;DP=3049;DP4=1225,1684,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.67189e-05;MQSB=0.859108;RPB=0.905724;SGB=44.5415;VDB=0.882096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.2:20232167 chr02:020232167 0 W/20232167-20232167 FN2286 SNP T -> C AC=2;AN=192;BQB=0.828963;DP=4947;DP4=2497,2157,18,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000202143;MQB=5.90548e-25;MQSB=0.6614;RPB=0.903754;SGB=105.844;VDB=0.954672;EFF=INTRON(MODIFIER||||360|LOC_Os02g33944|protein_coding|CODING|LOC_Os02g33944.1|3|1) FN2092-S.SNP.2:20238210 chr02:020238210 0 W/20238210-20238210 FN2092-S SNP A -> G AC=1;AN=168;BQB=0.230326;DP=2515;DP4=1392,1083,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000477465;MQSB=0.541688;RPB=0.420541;SGB=-2.96336;VDB=0.611614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.2:20238549 chr02:020238549 0 W/20238549-20238549 FN2740-S SNP C -> G AC=1;AN=200;BQB=0.681773;DP=4448;DP4=2267,1960,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.75308e-10;MQSB=0.693533;RPB=0.934269;SGB=81.8956;VDB=0.247169;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.2:20240385 chr02:020240385 0 W/20240385-20240385 FN3324-S SNP G -> A AC=2;AN=184;BQB=0.988671;DP=2730;DP4=1245,1397,7,9;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.16917e-05;MQSB=0.00583896;RPB=0.998272;SGB=66.8296;VDB=0.718985;EFF=INTRON(MODIFIER||||227|LOC_Os02g33960|protein_coding|CODING|LOC_Os02g33960.1|1|1) FN2634-S.SNP.2:20244958 chr02:020244958 0 W/20244958-20244958 FN2634-S SNP G -> T AC=1;AN=200;BQB=0.76984;DP=4372;DP4=2047,2103,10,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00251601;MQB=4.28484e-08;MQSB=0.757986;RPB=0.829077;SGB=21.6694;VDB=0.948835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.2:20254443 chr02:020254443 0 W/20254443-20254443 FN2390 SNP T -> C AC=1;AN=200;BQB=0.826538;DP=4751;DP4=2083,2388,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210482;MQB=2.8121e-15;MQSB=0.763539;RPB=0.98679;SGB=79.9264;VDB=0.701482;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.2:20255043 chr02:020255043 0 W/20255043-20255043 FN-311 Single Base Substitution G-A INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1332-S.SNP.2:20255043 chr02:020255043 0 W/20255043-20255043 FN1332-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2317.SNP.2:20255043 chr02:020255043 0 W/20255043-20255043 FN2317 SNP G -> A AC=1;AN=192;BQB=0.988167;DP=4964;DP4=2438,2227,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.44575e-12;MQSB=0.511809;RPB=0.94644;SGB=41.7357;VDB=0.895917;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.2:20255043 chr02:020255043 0 W/20255043-20255043 FN838-S Single Base Substitution G-A INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2544-S.SNP.2:20261804 chr02:020261804 0 W/20261804-20261804 FN2544-S SNP G -> A AC=2;AN=198;BQB=0.983716;DP=4210;DP4=1859,2067,20,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.9786e-20;MQSB=0.845511;RPB=0.441772;SGB=38.0616;VDB=0.788915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.2:20261804 chr02:020261804 0 W/20261804-20261804 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.943279;DP=2799;DP4=1421,1269,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74429e-08;MQSB=0.841601;RPB=0.911694;SGB=32.5467;VDB=0.95991;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.2:20261804 chr02:020261804 0 W/20261804-20261804 FN4094-S SNP G -> A AC=1;AN=182;BQB=0.966252;DP=3008;DP4=1650,1269,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.42722e-10;MQSB=0.536627;RPB=0.997414;SGB=23.1441;VDB=0.25488;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.2:20261804 chr02:020261804 0 W/20261804-20261804 FN498-S Single Base Substitution G-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN926-S.SNP.2:20261804 chr02:020261804 0 W/20261804-20261804 FN926-S Single Base Substitution G-A INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN4109-S.SNP.2:20269545 chr02:020269545 0 W/20269545-20269545 FN4109-S SNP G -> A AC=2;AN=182;BQB=0.892559;DP=2138;DP4=1369,705,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.24194e-14;MQSB=0.117594;RPB=0.867992;SGB=111.774;VDB=0.719385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.2:20273734 chr02:020273734 0 W/20273734-20273734 FN1236-S Single Base Substitution C-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN-349.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN-349 Single Base Substitution T-A INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1028-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN1028-S Single Base Substitution T-A INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1254-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN1254-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN2094-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN2094-S SNP T -> A AC=1;AN=168;BQB=0.707575;DP=3364;DP4=1786,1540,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=5.32165e-05;MQSB=0.182037;RPB=0.363535;SGB=-12.7876;VDB=0.864647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN3839-S SNP T -> A AC=1;AN=190;BQB=0.843606;DP=2729;DP4=1241,1364,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.93963e-08;MQSB=0.93853;RPB=0.580705;SGB=53.8699;VDB=0.270255;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN447-S Single Base Substitution T-A INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN805-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN805-S Single Base Substitution T-A INTERGENIC HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN891-S.SNP.2:20282309 chr02:020282309 0 W/20282309-20282309 FN891-S Single Base Substitution T-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3508-S.SNP.2:20286495 chr02:020286495 0 W/20286495-20286495 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.674963;DP=2194;DP4=1088,1022,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.36688e-07;MQSB=0.989391;RPB=0.766948;SGB=46.6141;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.2:20296951 chr02:020296951 0 W/20296951-20296951 FN2495 SNP G -> A AC=1;AN=200;BQB=0.795304;DP=4953;DP4=2613,2044,7,6;HOB=5e-05;ICB=0.0001005;MQ=12;MQ0F=0.398344;MQB=0.00643308;MQSB=0;RPB=0.719317;SGB=36.6644;VDB=0.482286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P91L|1053|LOC_Os02g34000|protein_coding|CODING|LOC_Os02g34000.1|1|1) FN2173-S.SNP.2:20298071 chr02:020298071 0 W/20298071-20298071 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.992617;DP=3700;DP4=1649,1991,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.184865;MQB=0.96496;MQSB=0;RPB=0.730093;SGB=36.7696;VDB=0.561379;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.2:20302220 chr02:020302220 0 W/20302220-20302220 FN4075-S SNP A -> G AC=2;AN=182;BQB=0.847301;DP=2893;DP4=1570,1228,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.16519e-12;MQSB=0.977474;RPB=0.999646;SGB=70.7363;VDB=0.893418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.2:20305081 chr02:020305081 0 W/20305081-20305081 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.306294;DP=2589;DP4=1245,1249,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00150901;MQSB=0.995479;RPB=0.0924723;SGB=10.6662;VDB=0.450065;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.2:20305686 chr02:020305686 0 W/20305686-20305686 FN885-S Single Base Substitution T-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN405-S.SNP.2:20314594 chr02:020314594 0 W/20314594-20314594 FN405-S Single Base Substitution A-T INTRON HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3990-S.SNP.2:20320062 chr02:020320062 0 W/20320062-20320062 FN3990-S SNP G -> A AC=1;AN=168;BQB=0.933385;DP=3080;DP4=1530,1449,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0113636;MQB=0.000316594;MQSB=4.66739e-06;RPB=0.896943;SGB=12.7756;VDB=0.251925;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T405|576|LOC_Os02g34020|protein_coding|CODING|LOC_Os02g34020.1|6|1) FN-81.SNP.2:20320385 chr02:020320385 0 W/20320385-20320385 FN-81 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g34020 transposon protein, putative, CACTA, En/Spm sub-class SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN-191.SNP.2:20324933 chr02:020324933 0 W/20324933-20324933 FN-191 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g34030 retrotransposon protein, putative, unclassified, expressed SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3294-S.SNP.2:20329120 chr02:020329120 0 W/20329120-20329120 FN3294-S SNP T -> C AC=1;AN=184;BQB=0.913356;DP=2462;DP4=1356,1028,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.59144e-12;MQSB=0.996919;RPB=0.528797;SGB=80.3949;VDB=0.342534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.2:20337925 chr02:020337925 0 W/20337925-20337925 FN1450-S Single Base Substitution A-G INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3399-S.SNP.2:20338109 chr02:020338109 0 W/20338109-20338109 FN3399-S SNP C -> T AC=2;AN=184;BQB=0.998975;DP=3107;DP4=1469,1540,8,18;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0083682;MQB=0.000671162;MQSB=0.00142333;RPB=0.925186;SGB=81.5311;VDB=0.463436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.2:20341920 chr02:020341920 0 W/20341920-20341920 FN2584-S SNP A -> G AC=1;AN=198;BQB=0.633965;DP=4190;DP4=1995,1943,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238663;MQB=7.69849e-17;MQSB=0.252474;RPB=0.987809;SGB=127.666;VDB=0.0645088;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F160S|1179|LOC_Os02g34040|protein_coding|CODING|LOC_Os02g34040.1|3|1) FN4066-S.SNP.2:20342157 chr02:020342157 0 W/20342157-20342157 FN4066-S SNP T -> C AC=1;AN=168;BQB=0.635724;DP=2726;DP4=1358,1251,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0205429;MQB=0.925961;MQSB=0.997252;RPB=0.142888;SGB=38.1788;VDB=0.0147164;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D81G|1179|LOC_Os02g34040|protein_coding|CODING|LOC_Os02g34040.1|3|1) FN-201.SNP.2:20343492 chr02:020343492 0 W/20343492-20343492 FN-201 Single Base Substitution G-A INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2387.SNP.2:20344539 chr02:020344539 0 W/20344539-20344539 FN2387 SNP G -> A AC=1;AN=192;BQB=0.0137259;DP=5131;DP4=2219,2517,19,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.34651e-22;MQSB=0.98621;RPB=0.334655;SGB=-338.881;VDB=0.674799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.2:20346657 chr02:020346657 0 W/20346657-20346657 FN3597-S SNP G -> T AC=1;AN=188;BQB=0.550454;DP=2640;DP4=1298,1268,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11536e-08;MQSB=0.947767;RPB=0.991646;SGB=28.6195;VDB=0.164017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.2:20353988 chr02:020353988 0 W/20353988-20353988 FN2667-S SNP A -> G AC=1;AN=200;BQB=0.848079;DP=4810;DP4=2271,2387,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.99681e-06;MQSB=0.973714;RPB=0.785436;SGB=13.8539;VDB=0.373797;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S100|153|LOC_Os02g34060|protein_coding|CODING|LOC_Os02g34060.1|1|1) FN1202-S.SNP.2:20355727 chr02:020355727 0 W/20355727-20355727 FN1202-S Single Base Substitution A-G INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-311.SNP.2:20357226 chr02:020357226 0 W/20357226-20357226 FN-311 Single Base Substitution A-T INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2106-S.SNP.2:20361523 chr02:020361523 0 W/20361523-20361523 FN2106-S SNP G -> A AC=1;AN=168;BQB=0.272162;DP=3271;DP4=1583,1630,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.35987e-10;MQSB=0.942108;RPB=0.993084;SGB=-40.6433;VDB=0.832449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.2:20361754 chr02:020361754 0 W/20361754-20361754 FN1716-S SNP G -> A AC=1;AN=188;BQB=0.0425582;DP=3066;DP4=1632,1387,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43273e-08;MQSB=0.528542;RPB=0.90058;SGB=-103.637;VDB=0.611851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.2:20378109 chr02:020378109 0 W/20378109-20378109 FN1368-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1757-S.SNP.2:20379822 chr02:020379822 0 W/20379822-20379822 FN1757-S SNP G -> T AC=2;AN=188;BQB=0.192022;DP=3305;DP4=1876,1365,26,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06232e-20;MQSB=0.976939;RPB=0.945957;SGB=-99.7768;VDB=0.521772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.2:20390823 chr02:020390823 0 W/20390823-20390823 FN2395 SNP A -> C AC=1;AN=200;BQB=0.768129;DP=4933;DP4=2393,2276,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81963e-10;MQSB=0.999915;RPB=0.656058;SGB=77.2904;VDB=0.747207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.2:20392983 chr02:020392983 0 W/20392983-20392983 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.878474;DP=2469;DP4=1180,1216,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.75166e-06;MQSB=0.833715;RPB=0.0824013;SGB=32.2261;VDB=0.168008;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R36|75|LOC_Os02g34090|protein_coding|CODING|LOC_Os02g34090.1|2|1) FN2557-S.SNP.2:20393409 chr02:020393409 0 W/20393409-20393409 FN2557-S SNP C -> A AC=1;AN=198;BQB=0.428583;DP=2905;DP4=1767,925,9,1;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000737315;MQSB=4.5225e-21;RPB=0.999956;SGB=25.7687;VDB=0.178328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:20405646 chr02:020405646 0 W/20405646-20405646 FN2668-S SNP T -> A AC=1;AN=200;BQB=0.593056;DP=4807;DP4=3449,995,10,4;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0145621;MQB=0.279711;MQSB=0;RPB=0.936934;SGB=40.2696;VDB=0.836531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:20405647 chr02:020405647 0 W/20405647-20405647 FN2668-S SNP T -> A AC=1;AN=200;BQB=0.825212;DP=4802;DP4=3505,1031,11,3;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0147855;MQB=0.329715;MQSB=0;RPB=0.987256;SGB=21.6694;VDB=0.825299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:20406091 chr02:020406091 0 W/20406091-20406091 FN2668-S SNP T -> G AC=1;AN=200;BQB=0.520405;DP=5817;DP4=2269,2434,18,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.92457e-18;MQSB=0.493086;RPB=0.543977;SGB=155.578;VDB=0.399479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.2:20406918 chr02:020406918 0 W/20406918-20406918 FN1156-XA21 Single Base Substitution A-G INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN-155.SNP.2:20417064 chr02:020417064 0 W/20417064-20417064 FN-155 Single Base Substitution A-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-155.SNP.2:20417065 chr02:020417065 0 W/20417065-20417065 FN-155 Single Base Substitution C-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1297-S.SNP.2:20424173 chr02:020424173 0 W/20424173-20424173 FN1297-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2582-S.SNP.2:20426029 chr02:020426029 0 W/20426029-20426029 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.336207;DP=4163;DP4=2224,1703,3,15;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00168148;MQB=1.08961e-08;MQSB=7.51671e-07;RPB=0.00218778;SGB=-35.8307;VDB=0.00754389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.2:20427215 chr02:020427215 0 W/20427215-20427215 FN3110-S SNP G -> A AC=2;AN=184;BQB=0.452606;DP=3077;DP4=1694,1289,24,14;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0464738;MQB=7.17052e-07;MQSB=0.0700851;RPB=0.931944;SGB=81.2762;VDB=0.822217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V176I|1545|LOC_Os02g34160|protein_coding|CODING|LOC_Os02g34160.1|2|1) FN4230-S.SNP.2:20428830 chr02:020428830 0 W/20428830-20428830 FN4230-S SNP C -> T AC=2;AN=170;BQB=0.999578;DP=2542;DP4=1284,1179,13,10;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0338316;MQB=1.00865e-09;MQSB=0.0572795;RPB=0.759674;SGB=96.7413;VDB=0.134098;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L668|1545|LOC_Os02g34160|protein_coding|CODING|LOC_Os02g34160.1|3|1) FN4230-S.SNP.2:20428833 chr02:020428833 0 W/20428833-20428833 FN4230-S SNP C -> A AC=2;AN=170;BQB=0.752027;DP=2559;DP4=1283,1213,15,10;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0304807;MQB=8.695e-09;MQSB=0.0941668;RPB=0.831774;SGB=105.627;VDB=0.247165;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H669N|1545|LOC_Os02g34160|protein_coding|CODING|LOC_Os02g34160.1|3|1) FN-88.SNP.2:20429547 chr02:020429547 0 W/20429547-20429547 FN-88 Single Base Substitution A-G INTRON HOMO SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN-206.SNP.2:20434283 chr02:020434283 0 W/20434283-20434283 FN-206 Single Base Substitution A-T INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3110-S.SNP.2:20445673 chr02:020445673 0 W/20445673-20445673 FN3110-S SNP G -> A AC=2;AN=184;BQB=0.889864;DP=3880;DP4=1832,1962,12,21;HOB=0.0215028;ICB=0.494625;MQ=15;MQ0F=0.434278;MQB=0.316819;MQSB=0;RPB=0.911136;SGB=143.7;VDB=0.483613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S515F|2028|LOC_Os02g34180|protein_coding|CODING|LOC_Os02g34180.1|1|1) FN3399-S.SNP.2:20455357 chr02:020455357 0 W/20455357-20455357 FN3399-S SNP A -> T AC=2;AN=184;BQB=0.746315;DP=2138;DP4=1114,951,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.95427e-06;MQSB=0.947081;RPB=0.996854;SGB=62.3078;VDB=0.227356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.2:20468964 chr02:020468964 0 W/20468964-20468964 FN3626-S SNP A -> T AC=1;AN=190;BQB=0.711794;DP=2830;DP4=1379,1237,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000471507;MQSB=0.368003;RPB=0.741395;SGB=-2.10437;VDB=0.429561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.2:20470517 chr02:020470517 0 W/20470517-20470517 FN1420-S Single Base Substitution C-T INTRON HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2291.SNP.2:20474358 chr02:020474358 0 W/20474358-20474358 FN2291 SNP G -> A AC=1;AN=192;BQB=0.447167;DP=4867;DP4=2254,2338,27,27;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.44271e-28;MQSB=0.79098;RPB=0.97318;SGB=65.2357;VDB=0.388961;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.2:20476035 chr02:020476035 0 W/20476035-20476035 FN_831-4-1 Single Base Substitution C-T HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN-129.SNP.2:20479925 chr02:020479925 0 W/20479925-20479925 FN-129 Single Base Substitution G-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3678-S.SNP.2:20482596 chr02:020482596 0 W/20482596-20482596 FN3678-S SNP T -> A AC=1;AN=190;BQB=0.211789;DP=2808;DP4=1289,1324,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16915e-05;MQSB=0.999789;RPB=0.834698;SGB=21.1058;VDB=0.408117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.2:20487713 chr02:020487713 0 W/20487713-20487713 FN1284-S Single Base Substitution C-G INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2107-S.SNP.2:20490356 chr02:020490356 0 W/20490356-20490356 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.11402;DP=3369;DP4=1944,1375,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.66733e-10;MQSB=0.996745;RPB=0.930342;SGB=-147.902;VDB=0.0992012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.2:20490828 chr02:020490828 0 W/20490828-20490828 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.989398;DP=4802;DP4=1965,2622,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.8887e-19;MQSB=0.999999;RPB=0.4721;SGB=132.552;VDB=0.451226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.2:20491443 chr02:020491443 0 W/20491443-20491443 FN-356 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2126-S.SNP.2:20494889 chr02:020494889 0 W/20494889-20494889 FN2126-S SNP C -> G AC=1;AN=168;BQB=0.960115;DP=3543;DP4=1745,1683,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.98912e-10;MQSB=0.987372;RPB=0.841519;SGB=36.7696;VDB=0.0978335;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.2:20498490 chr02:020498490 0 W/20498490-20498490 FN502-S Single Base Substitution C-A INTERGENIC HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2107-S.SNP.2:20512683 chr02:020512683 0 W/20512683-20512683 FN2107-S SNP T -> C AC=1;AN=168;BQB=0.0400209;DP=3208;DP4=1180,2005,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00010538;MQSB=0.720838;RPB=0.954863;SGB=-16.665;VDB=0.790939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.2:20513106 chr02:020513106 0 W/20513106-20513106 FN1265-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN-371.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN-371 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN-381.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN-381 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN1037-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN1037-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1665-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN1665-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2420.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN2420 SNP G -> T AC=1;AN=200;BQB=0.600105;DP=7766;DP4=3971,3488,20,17;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000515066;MQB=0.000365755;MQSB=0.00853926;RPB=0.241809;SGB=164.789;VDB=0.434222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN2566-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN2566-S SNP G -> T AC=1;AN=198;BQB=0.693028;DP=7427;DP4=3556,3622,13,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00996365;MQB=0.0663665;MQSB=4.15654e-25;RPB=0.836788;SGB=54.5295;VDB=0.942765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN260-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN260-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN282-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN282-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3311-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN3311-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3528-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN3528-S SNP G -> T AC=1;AN=188;BQB=0.928648;DP=5511;DP4=2838,2595,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.00173175;MQSB=0.231494;RPB=0.864255;SGB=85.3253;VDB=0.19611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN3701-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN3701-S SNP G -> T AC=1;AN=190;BQB=0.97017;DP=5161;DP4=2624,2393,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=9.62459e-05;MQSB=0.659631;RPB=0.529342;SGB=89.4087;VDB=0.779631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN3863-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN3863-S SNP G -> T AC=1;AN=158;BQB=0.879822;DP=4384;DP4=2202,2044,22,13;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.000738123;MQSB=0.0719632;RPB=0.999756;SGB=108.201;VDB=0.667708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN4229-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN4229-S SNP G -> T AC=1;AN=170;BQB=0.999993;DP=4540;DP4=2247,2203,12,8;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.00408599;MQSB=0.293042;RPB=0.360392;SGB=83.4133;VDB=0.295739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1677S|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN464-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN464-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN752-S.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN752-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN_776-5-1.SNP.2:20526845 chr02:020526845 0 W/20526845-20526845 FN_776-5-1 Single Base Substitution G-T HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3095-S.SNP.2:20526926 chr02:020526926 0 W/20526926-20526926 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.259311;DP=5928;DP4=3154,2610,15,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52819e-12;MQSB=0.968562;RPB=0.985973;SGB=99.14;VDB=0.201842;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1704*|1714|LOC_Os02g34300|protein_coding|CODING|LOC_Os02g34300.1|11|1) FN1762-S.SNP.2:20528122 chr02:020528122 0 W/20528122-20528122 FN1762-S SNP C -> T AC=1;AN=188;BQB=0.66107;DP=4986;DP4=2497,2393,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.12638e-06;MQSB=0.0620395;RPB=0.887955;SGB=-67.7293;VDB=0.445445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.2:20529303 chr02:020529303 0 W/20529303-20529303 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.986908;DP=4389;DP4=2218,1891,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.47627e-07;MQSB=0.999954;RPB=0.547893;SGB=36.6644;VDB=0.079596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.2:20529326 chr02:020529326 0 W/20529326-20529326 FN1042-S Single Base Substitution C-A INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1572-S.SNP.2:20530797 chr02:020530797 0 W/20530797-20530797 FN1572-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN2529-S.SNP.2:20533451 chr02:020533451 0 W/20533451-20533451 FN2529-S SNP G -> A AC=2;AN=198;BQB=0.999935;DP=3962;DP4=1649,1966,14,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.75959e-15;MQSB=0.858141;RPB=0.187333;SGB=127.666;VDB=0.622115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.2:20533453 chr02:020533453 0 W/20533453-20533453 FN2529-S SNP A -> G AC=2;AN=198;BQB=0.91053;DP=3981;DP4=1668,2058,16,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.88347e-16;MQSB=0.886251;RPB=0.322878;SGB=136.856;VDB=0.550968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN-180 Single Base Substitution G-A INTRON HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN-85.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN-85 Single Base Substitution G-A INTRON HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1075-S.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN1075-S Single Base Substitution G-A INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2365.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN2365 SNP G -> A AC=1;AN=192;BQB=0.932722;DP=5515;DP4=2823,2237,25,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.47061e-24;MQSB=0.686561;RPB=0.999798;SGB=85.3296;VDB=0.9468;EFF=INTRON(MODIFIER||||310|LOC_Os02g34320|protein_coding|CODING|LOC_Os02g34320.1|2|1) FN3577-S.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN3577-S SNP G -> A AC=2;AN=188;BQB=0.876365;DP=2748;DP4=1453,1129,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.69263e-19;MQSB=0.984809;RPB=0.662999;SGB=76.9421;VDB=0.211397;EFF=INTRON(MODIFIER||||310|LOC_Os02g34320|protein_coding|CODING|LOC_Os02g34320.1|2|1) FN3899-S.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN3899-S SNP G -> A AC=2;AN=158;BQB=0.93075;DP=2579;DP4=1403,1028,19,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.79651e-18;MQSB=0.976256;RPB=0.0985303;SGB=94.7235;VDB=0.730037;EFF=INTRON(MODIFIER||||310|LOC_Os02g34320|protein_coding|CODING|LOC_Os02g34320.1|2|1) FN405-S.SNP.2:20537786 chr02:020537786 0 W/20537786-20537786 FN405-S Single Base Substitution G-A INTRON HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1080-S.SNP.2:20541601 chr02:020541601 0 W/20541601-20541601 FN1080-S Single Base Substitution G-C INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2435.SNP.2:20542589 chr02:020542589 0 W/20542589-20542589 FN2435 SNP C -> G AC=1;AN=200;BQB=0.836381;DP=4311;DP4=1940,2128,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10596e-11;MQSB=0.989284;RPB=0.157842;SGB=37.3004;VDB=0.247328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K297N|440|LOC_Os02g34330|protein_coding|CODING|LOC_Os02g34330.1|2|1) FN488-S.SNP.2:20544901 chr02:020544901 0 W/20544901-20544901 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2243-S.SNP.2:20547996 chr02:020547996 0 W/20547996-20547996 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.71473;DP=4938;DP4=2418,2219,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.37279e-12;MQSB=0.954999;RPB=0.0854925;SGB=8.77275;VDB=0.043225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.2:20547997 chr02:020547997 0 W/20547997-20547997 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.679702;DP=4918;DP4=2424,2162,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19921e-09;MQSB=0.928242;RPB=0.159436;SGB=46.7622;VDB=0.177717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.2:20548001 chr02:020548001 0 W/20548001-20548001 FN2243-S SNP T -> A AC=1;AN=190;BQB=0.503994;DP=4929;DP4=2362,2214,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59661e-09;MQSB=0.908803;RPB=0.10704;SGB=58.2031;VDB=0.307781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.2:20551531 chr02:020551531 0 W/20551531-20551531 FN2307 SNP C -> T AC=1;AN=192;BQB=0.176729;DP=4812;DP4=2177,2350,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04929e-16;MQSB=0.878183;RPB=0.972241;SGB=-42.2982;VDB=0.442503;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S399|710|LOC_Os02g34350|protein_coding|CODING|LOC_Os02g34350.1|4|1) FN899-S.SNP.2:20553194 chr02:020553194 0 W/20553194-20553194 FN899-S Single Base Substitution C-A INTRON HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN899-S.SNP.2:20553195 chr02:020553195 0 W/20553195-20553195 FN899-S Single Base Substitution T-A INTRON HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2584-S.SNP.2:20554307 chr02:020554307 0 W/20554307-20554307 FN2584-S SNP T -> G AC=1;AN=198;BQB=0.548961;DP=4031;DP4=1989,1818,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000496155;MQB=6.26877e-05;MQSB=0.991322;RPB=0.979505;SGB=108.456;VDB=0.383859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K41T|710|LOC_Os02g34350|protein_coding|CODING|LOC_Os02g34350.1|2|1) FN2188-S.SNP.2:20554414 chr02:020554414 0 W/20554414-20554414 FN2188-S SNP A -> G AC=1;AN=190;BQB=0.718732;DP=4364;DP4=2166,1886,23,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000229148;MQB=3.27848e-05;MQSB=3.11566e-05;RPB=0.547577;SGB=69.6295;VDB=0.640963;EFF=INTRON(MODIFIER||||710|LOC_Os02g34350|protein_coding|CODING|LOC_Os02g34350.1|1|1) FN3852-S.SNP.2:20562315 chr02:020562315 0 W/20562315-20562315 FN3852-S SNP A -> G AC=1;AN=158;BQB=0.952769;DP=2572;DP4=965,1471,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.59987e-08;MQSB=0.696953;RPB=0.735887;SGB=19.0798;VDB=0.553255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.2:20562323 chr02:020562323 0 W/20562323-20562323 FN2171-S SNP G -> A AC=1;AN=168;BQB=0.0881446;DP=3462;DP4=1403,2000,5,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92571e-07;MQSB=0.99631;RPB=0.958472;SGB=-38.9357;VDB=0.51117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.2:20564666 chr02:020564666 0 W/20564666-20564666 FN2175-S SNP C -> T AC=2;AN=168;BQB=0.0416326;DP=3587;DP4=1672,1843,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.12207e-10;MQSB=0.992257;RPB=0.877214;SGB=-183.594;VDB=0.886834;EFF=INTRON(MODIFIER||||347|LOC_Os02g34370|protein_coding|CODING|LOC_Os02g34370.1|2|1) FN3518-S.SNP.2:20572303 chr02:020572303 0 W/20572303-20572303 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.671617;DP=3108;DP4=1546,1479,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00032175;MQB=1.36655e-10;MQSB=0.396491;RPB=0.142849;SGB=57.244;VDB=0.344897;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A12T|495|LOC_Os02g34380|protein_coding|CODING|LOC_Os02g34380.1|1|1) FN3896-S.SNP.2:20583252 chr02:020583252 0 W/20583252-20583252 FN3896-S SNP C -> T AC=2;AN=158;BQB=0.980894;DP=2462;DP4=1086,1266,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.75658e-11;MQSB=0.994469;RPB=0.899396;SGB=61.029;VDB=0.0413024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.2:20586578 chr02:020586578 0 W/20586578-20586578 FN1301-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1117-S.SNP.2:20596692 chr02:020596692 0 W/20596692-20596692 FN1117-S Single Base Substitution G-C INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2243-S.SNP.2:20599652 chr02:020599652 0 W/20599652-20599652 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.000304453;DP=4324;DP4=1669,2322,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.37728e-08;MQSB=0.000761448;RPB=0.927295;SGB=38.983;VDB=0.523536;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.2:20600670 chr02:020600670 0 W/20600670-20600670 FN4112-S SNP A -> G AC=2;AN=182;BQB=0.951697;DP=3055;DP4=1468,1454,16,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.35255e-23;MQSB=0.995876;RPB=0.671763;SGB=161.394;VDB=0.222968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.2:20602144 chr02:020602144 0 W/20602144-20602144 FN1439-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN-249.SNP.2:20621142 chr02:020621142 0 W/20621142-20621142 FN-249 Single Base Substitution G-A INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN622-S.SNP.2:20621594 chr02:020621594 0 W/20621594-20621594 FN622-S Single Base Substitution A-C INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2212-S.SNP.2:20622561 chr02:020622561 0 W/20622561-20622561 FN2212-S SNP T -> G AC=2;AN=190;BQB=0.991077;DP=4761;DP4=2392,2068,37,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.70916e-41;MQSB=0.992833;RPB=0.680615;SGB=246.357;VDB=0.991018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.2:20628736 chr02:020628736 0 W/20628736-20628736 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.796106;DP=3056;DP4=1571,1367,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.53316e-07;MQSB=0.989773;RPB=0.448491;SGB=2.23696;VDB=0.146498;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.2:20634921 chr02:020634921 0 W/20634921-20634921 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.99863;DP=2715;DP4=1429,1209,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.26643e-11;MQSB=0.847189;RPB=0.939466;SGB=80.782;VDB=0.992668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.2:20656125 chr02:020656125 0 W/20656125-20656125 FN3378-S SNP G -> A AC=2;AN=184;BQB=0.576055;DP=3457;DP4=1509,1827,17,32;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000578536;MQB=5.7504e-21;MQSB=0.357936;RPB=0.757678;SGB=216.049;VDB=0.899839;EFF=INTRON(MODIFIER||||102|LOC_Os02g34470|protein_coding|CODING|LOC_Os02g34470.1|3|1) FN2750-S.SNP.2:20656794 chr02:020656794 0 W/20656794-20656794 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.498229;DP=4681;DP4=2144,2167,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000854518;MQB=1.98822e-07;MQSB=0.939101;RPB=0.128805;SGB=72.6852;VDB=0.821711;EFF=INTRON(MODIFIER||||102|LOC_Os02g34470|protein_coding|CODING|LOC_Os02g34470.1|3|1) FN1697-S.SNP.2:20660831 chr02:020660831 0 W/20660831-20660831 FN1697-S SNP T -> C AC=1;AN=188;BQB=0.450596;DP=3633;DP4=1668,1938,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.1488e-06;MQSB=0.922892;RPB=0.81157;SGB=5.5382;VDB=0.918865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.2:20665679 chr02:020665679 0 W/20665679-20665679 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.515673;DP=3013;DP4=1331,1595,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.14994e-05;MQSB=0.996889;RPB=0.999818;SGB=32.441;VDB=0.511287;EFF=INTRON(MODIFIER||||1074|LOC_Os02g34490|protein_coding|CODING|LOC_Os02g34490.1|3|1) FN4150-S.SNP.2:20667894 chr02:020667894 0 W/20667894-20667894 FN4150-S SNP A -> G AC=2;AN=170;BQB=0.98102;DP=2597;DP4=1197,1284,32,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.64326e-30;MQSB=0.995369;RPB=0.585379;SGB=201.55;VDB=0.736456;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V769|1074|LOC_Os02g34490|protein_coding|CODING|LOC_Os02g34490.1|4|1) FN3981-S.SNP.2:20672118 chr02:020672118 0 W/20672118-20672118 FN3981-S SNP G -> A AC=1;AN=168;BQB=0.98438;DP=2288;DP4=810,1378,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14949e-05;MQSB=0.501858;RPB=0.772229;SGB=34.4498;VDB=0.105289;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.2:20675898 chr02:020675898 0 W/20675898-20675898 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2252-S.SNP.2:20676803 chr02:020676803 0 W/20676803-20676803 FN2252-S SNP G -> A AC=2;AN=190;BQB=0.985605;DP=3494;DP4=1700,1557,17,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.09017e-14;MQSB=0.559833;RPB=0.925312;SGB=121.957;VDB=0.209693;EFF=START_GAINED(LOW||||808|LOC_Os02g34500|protein_coding|CODING|LOC_Os02g34500.1|2|1),UTR_5_PRIME(MODIFIER||61||808|LOC_Os02g34500|protein_coding|CODING|LOC_Os02g34500.1|2|1) FN957-S.SNP.2:20682265 chr02:020682265 0 W/20682265-20682265 FN957-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1313-S.SNP.2:20685882 chr02:020685882 0 W/20685882-20685882 FN1313-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3698-S.SNP.2:20688010 chr02:020688010 0 W/20688010-20688010 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.969742;DP=2590;DP4=1410,1068,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1062e-06;MQSB=0.977869;RPB=0.955824;SGB=39.9877;VDB=0.840211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.2:20693497 chr02:020693497 0 W/20693497-20693497 FN2677-S SNP C -> T AC=1;AN=200;BQB=0.579127;DP=5041;DP4=2448,2347,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.37089e-09;MQSB=0.126935;RPB=0.419127;SGB=58.2954;VDB=0.739976;EFF=INTRON(MODIFIER||||178|LOC_Os02g34520|protein_coding|CODING|LOC_Os02g34520.1|4|1) FN2666-S.SNP.2:20696147 chr02:020696147 0 W/20696147-20696147 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.746853;DP=5877;DP4=2496,3069,21,20;HOB=5e-05;ICB=0.0001005;MQ=13;MQ0F=0.456696;MQB=0.263994;MQSB=0;RPB=0.134301;SGB=137.609;VDB=0.00151604;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.2:20696147 chr02:020696147 0 W/20696147-20696147 FN3921-S SNP G -> A AC=1;AN=158;BQB=0.898404;DP=3443;DP4=1382,1934,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=15;MQ0F=0.439733;MQB=0.147406;MQSB=0;RPB=0.484882;SGB=34.0735;VDB=0.281535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.2:20706831 chr02:020706831 0 W/20706831-20706831 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.93248;DP=3026;DP4=1326,1543,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53013e-12;MQSB=0.884457;RPB=0.937279;SGB=60.4004;VDB=0.0464703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.2:20707871 chr02:020707871 0 W/20707871-20707871 FN3862-S SNP C -> A AC=1;AN=158;BQB=0.853342;DP=2335;DP4=1226,1052,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=8.87307e-06;MQSB=0.0592328;RPB=0.983132;SGB=38.3284;VDB=0.456924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.2:20707974 chr02:020707974 0 W/20707974-20707974 FN1337-S Single Base Substitution T-A INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3567-S.SNP.2:20710484 chr02:020710484 0 W/20710484-20710484 FN3567-S SNP T -> C AC=1;AN=188;BQB=0.98426;DP=3245;DP4=1504,1629,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.94285e-14;MQSB=0.819706;RPB=0.413103;SGB=82.0471;VDB=0.241866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I509T|1456|LOC_Os02g34550|protein_coding|CODING|LOC_Os02g34550.1|4|1) FN2797-S.SNP.2:20711254 chr02:020711254 0 W/20711254-20711254 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.264458;DP=4413;DP4=2016,2175,23,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.98939e-25;MQSB=0.857211;RPB=0.999943;SGB=205.783;VDB=0.739109;EFF=INTRON(MODIFIER||||1456|LOC_Os02g34550|protein_coding|CODING|LOC_Os02g34550.1|4|1) FN1758-S.SNP.2:20711458 chr02:020711458 0 W/20711458-20711458 FN1758-S SNP T -> A AC=1;AN=188;BQB=0.585741;DP=3407;DP4=1609,1763,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.81904e-13;MQSB=0.910365;RPB=0.840583;SGB=36.2493;VDB=0.251772;EFF=INTRON(MODIFIER||||1456|LOC_Os02g34550|protein_coding|CODING|LOC_Os02g34550.1|4|1) FN846-S.SNP.2:20712721 chr02:020712721 0 W/20712721-20712721 FN846-S Single Base Substitution T-A INTRON HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN-134.SNP.2:20715840 chr02:020715840 0 W/20715840-20715840 FN-134 Single Base Substitution C-T INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN4154-S.SNP.2:20717782 chr02:020717782 0 W/20717782-20717782 FN4154-S SNP T -> G AC=1;AN=170;BQB=0.877989;DP=2546;DP4=1250,1234,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.93166e-08;MQSB=0.983279;RPB=0.840133;SGB=31.4354;VDB=0.450939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.2:20726151 chr02:020726151 0 W/20726151-20726151 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.669823;DP=5122;DP4=2343,2550,10,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68465e-17;MQSB=0.977781;RPB=0.236771;SGB=118.737;VDB=0.213013;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.2:20729150 chr02:020729150 0 W/20729150-20729150 FN661-S Single Base Substitution T-C INTRON HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN-292.SNP.2:20731923 chr02:020731923 0 W/20731923-20731923 FN-292 Single Base Substitution C-G INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN4230-S.SNP.2:20743396 chr02:020743396 0 W/20743396-20743396 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.862669;DP=3691;DP4=1349,2227,12,15;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.00866974;MQB=0.00147772;MQSB=0;RPB=0.988487;SGB=114.512;VDB=0.703225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.2:20744640 chr02:020744640 0 W/20744640-20744640 FN2721-S SNP T -> C AC=1;AN=200;BQB=0.99997;DP=5110;DP4=2408,2403,8,12;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0559687;MQB=0.0540536;MQSB=7.442e-05;RPB=0.619831;SGB=-11.8999;VDB=0.8884;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.2:20748897 chr02:020748897 0 W/20748897-20748897 FN-246 Single Base Substitution T-G INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2621-S.SNP.2:20752817 chr02:020752817 0 W/20752817-20752817 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.764619;DP=4719;DP4=2441,2045,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10303e-16;MQSB=0.98516;RPB=0.892559;SGB=132.552;VDB=0.575176;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.2:20761306 chr02:020761306 0 W/20761306-20761306 FN1037-S Single Base Substitution A-T INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN874-S.SNP.2:20761415 chr02:020761415 0 W/20761415-20761415 FN874-S Single Base Substitution A-T INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN935-S.SNP.2:20791381 chr02:020791381 0 W/20791381-20791381 FN935-S Single Base Substitution T-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. W42-1-3S-1.SNP.2:20792319 chr02:020792319 0 W/20792319-20792319 W42-1-3S-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g34660 retrotransposon protein, putative, unclassified, expressed SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2660-S.SNP.2:20793274 chr02:020793274 0 W/20793274-20793274 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.315843;DP=5098;DP4=2529,2334,9,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00294233;MQB=6.18406e-09;MQSB=0.0380741;RPB=0.954277;SGB=58.8698;VDB=0.637461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C570F|929|LOC_Os02g34660|protein_coding|CODING|LOC_Os02g34660.1|1|1) FN2660-S.SNP.2:20793276 chr02:020793276 0 W/20793276-20793276 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.463027;DP=5085;DP4=2550,2305,9,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00334317;MQB=1.9436e-09;MQSB=0.0395048;RPB=0.976587;SGB=43.8747;VDB=0.772645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A571S|929|LOC_Os02g34660|protein_coding|CODING|LOC_Os02g34660.1|1|1) FN3821-S.SNP.2:20797322 chr02:020797322 0 W/20797322-20797322 FN3821-S SNP T -> A AC=1;AN=190;BQB=0.989985;DP=2807;DP4=1390,1221,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000346418;MQSB=0.459555;RPB=0.878602;SGB=30.8803;VDB=0.519034;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.2:20797760 chr02:020797760 0 W/20797760-20797760 FN891-S Single Base Substitution T-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3305-S.SNP.2:20801963 chr02:020801963 0 W/20801963-20801963 FN3305-S SNP T -> A AC=1;AN=184;BQB=0.828139;DP=3173;DP4=1522,1543,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.61201e-09;MQSB=0.969348;RPB=0.987296;SGB=46.3132;VDB=0.0145027;EFF=INTRON(MODIFIER||||343|LOC_Os02g34680|protein_coding|CODING|LOC_Os02g34680.1|2|1) FN1585-S.SNP.2:20806026 chr02:020806026 0 W/20806026-20806026 FN1585-S Single Base Substitution G-T INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2536-S.SNP.2:20806621 chr02:020806621 0 W/20806621-20806621 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.928976;DP=4439;DP4=2041,2172,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.85467e-07;MQSB=0.995022;RPB=0.972499;SGB=24.1541;VDB=0.32843;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.2:20806621 chr02:020806621 0 W/20806621-20806621 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.999243;DP=2812;DP4=1271,1447,11,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.63602e-12;MQSB=0.932237;RPB=0.488633;SGB=38.2092;VDB=0.336234;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.2:20806621 chr02:020806621 0 W/20806621-20806621 FN664-S Single Base Substitution C-T INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN3844-S.SNP.2:20806935 chr02:020806935 0 W/20806935-20806935 FN3844-S SNP A -> G AC=1;AN=190;BQB=0.788409;DP=2693;DP4=1416,1195,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000135472;MQSB=0.991879;RPB=0.932423;SGB=39.9877;VDB=0.332598;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.2:20812872 chr02:020812872 0 W/20812872-20812872 FN_543-2-6 Single Base Substitution T-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2107-S.SNP.2:20815308 chr02:020815308 0 W/20815308-20815308 FN2107-S SNP T -> A AC=1;AN=168;BQB=0.930228;DP=3246;DP4=1374,1810,4,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87235e-08;MQSB=0.922417;RPB=0.991147;SGB=-14.5109;VDB=0.200442;EFF=UTR_3_PRIME(MODIFIER||103||590|LOC_Os02g34690|protein_coding|CODING|LOC_Os02g34690.1|12|1) FN3577-S.SNP.2:20821615 chr02:020821615 0 W/20821615-20821615 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.9663;DP=2493;DP4=1115,1306,9,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25158e-05;MQSB=0.987535;RPB=0.602033;SGB=39.8925;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.2:20822209 chr02:020822209 0 W/20822209-20822209 FN881-S Single Base Substitution G-A INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2483.SNP.2:20829353 chr02:020829353 0 W/20829353-20829353 FN2483 SNP C -> G AC=2;AN=200;BQB=0.986456;DP=4120;DP4=2124,1749,27,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000485437;MQB=5.65925e-18;MQSB=0.0439936;RPB=0.889212;SGB=86.7987;VDB=0.282415;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.2:20838555 chr02:020838555 0 W/20838555-20838555 FN912-S Single Base Substitution A-T INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2755-S.SNP.2:20841243 chr02:020841243 0 W/20841243-20841243 FN2755-S SNP A -> C AC=2;AN=200;BQB=0.930339;DP=4769;DP4=2108,2474,21,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.72084e-31;MQSB=0.758625;RPB=0.791645;SGB=224.656;VDB=0.862999;EFF=UTR_3_PRIME(MODIFIER||1156||856|LOC_Os02g34750|protein_coding|CODING|LOC_Os02g34750.1|4|1),INTRON(MODIFIER||||856|LOC_Os02g34750|protein_coding|CODING|LOC_Os02g34750.2|4|1) FN889-S.SNP.2:20842851 chr02:020842851 0 W/20842851-20842851 FN889-S Single Base Substitution C-A INTRON HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN3522-S.SNP.2:20846512 chr02:020846512 0 W/20846512-20846512 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.685861;DP=2997;DP4=1688,1232,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04762e-05;MQSB=0.783164;RPB=0.997312;SGB=58.0655;VDB=0.955712;EFF=UTR_5_PRIME(MODIFIER||381||304|LOC_Os02g34760|protein_coding|CODING|LOC_Os02g34760.1|1|1) FN1257-S.SNP.2:20852291 chr02:020852291 0 W/20852291-20852291 FN1257-S Single Base Substitution G-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN-145.SNP.2:20865429 chr02:020865429 0 W/20865429-20865429 FN-145 Single Base Substitution A-C INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN571-S.SNP.2:20868190 chr02:020868190 0 W/20868190-20868190 FN571-S Single Base Substitution A-C INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN4017-S.SNP.2:20872855 chr02:020872855 0 W/20872855-20872855 FN4017-S SNP A -> G AC=1;AN=168;BQB=0.952662;DP=2595;DP4=1228,1148,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.56248e-09;MQSB=0.837606;RPB=0.602481;SGB=58.7637;VDB=0.00578828;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.2:20875557 chr02:020875557 0 W/20875557-20875557 FN417-S Single Base Substitution A-C INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2316.SNP.2:20876841 chr02:020876841 0 W/20876841-20876841 FN2316 SNP T -> A AC=2;AN=192;BQB=0.922488;DP=4874;DP4=2083,2468,28,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.4003e-25;MQSB=0.543477;RPB=0.85139;SGB=4.41917;VDB=0.670222;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.2:20878486 chr02:020878486 0 W/20878486-20878486 FN1322-S Single Base Substitution A-T INTRON HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN-313.SNP.2:20883541 chr02:020883541 0 W/20883541-20883541 FN-313 Single Base Substitution A-C INTRON HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN3504-S.SNP.2:20888121 chr02:020888121 0 W/20888121-20888121 FN3504-S SNP G -> A AC=1;AN=188;BQB=0.96639;DP=2811;DP4=772,1714,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16138e-06;MQSB=4.22299e-05;RPB=0.996396;SGB=35.9843;VDB=0.676481;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.2:20888879 chr02:020888879 0 W/20888879-20888879 FN4116-S SNP A -> G AC=1;AN=182;BQB=0.977625;DP=2956;DP4=1574,1232,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.66134e-05;MQSB=0.993316;RPB=0.155222;SGB=39.6007;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.2:20890380 chr02:020890380 0 W/20890380-20890380 FN2600-S SNP T -> A AC=1;AN=198;BQB=0.212005;DP=4129;DP4=1855,1931,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.49708e-11;MQSB=0.978387;RPB=0.938572;SGB=20.5152;VDB=0.136267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-338.SNP.2:20891847 chr02:020891847 0 W/20891847-20891847 FN-338 Single Base Substitution T-C INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2172-S.SNP.2:20891847 chr02:020891847 0 W/20891847-20891847 FN2172-S SNP T -> C AC=1;AN=168;BQB=0.113829;DP=3489;DP4=1526,1898,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06778e-05;MQSB=0.748546;RPB=0.479219;SGB=-87.7854;VDB=0.32988;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.2:20891847 chr02:020891847 0 W/20891847-20891847 FN230-S Single Base Substitution T-C INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3890-S.SNP.2:20891847 chr02:020891847 0 W/20891847-20891847 FN3890-S SNP T -> C AC=2;AN=158;BQB=0.999126;DP=2283;DP4=945,1140,19,28;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.34136e-21;MQSB=0.000235147;RPB=0.0790894;SGB=166.816;VDB=0.488463;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.2:20891847 chr02:020891847 0 W/20891847-20891847 FN4160-S SNP T -> C AC=2;AN=170;BQB=0.817273;DP=2354;DP4=1062,1102,8,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000424809;MQB=2.41474e-08;MQSB=0.0231901;RPB=0.9706;SGB=38.3207;VDB=0.140339;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.2:20894544 chr02:020894544 0 W/20894544-20894544 FN1255-S Single Base Substitution G-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN-180.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN-180 Single Base Substitution T-C INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN-85.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN-85 Single Base Substitution T-C INTERGENIC HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1075-S.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN1075-S Single Base Substitution T-C INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2365.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN2365 SNP T -> C AC=2;AN=192;BQB=0.832554;DP=4559;DP4=1863,2109,15,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.3859e-28;MQSB=0.850263;RPB=0.935641;SGB=-107.57;VDB=0.392511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN3577-S SNP T -> C AC=2;AN=188;BQB=0.968398;DP=2706;DP4=1382,1115,21,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.06912e-16;MQSB=0.449522;RPB=0.810995;SGB=-5.76375;VDB=0.168805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN3899-S SNP T -> C AC=2;AN=158;BQB=0.947697;DP=2235;DP4=1076,1001,7,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.31447e-06;MQSB=0.748812;RPB=0.477777;SGB=37.4429;VDB=0.00936447;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.2:20895932 chr02:020895932 0 W/20895932-20895932 FN405-S Single Base Substitution T-C INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN2498.SNP.2:20902230 chr02:020902230 0 W/20902230-20902230 FN2498 SNP T -> A AC=1;AN=200;BQB=0.747947;DP=4991;DP4=2426,2335,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9402e-15;MQSB=0.975162;RPB=0.646852;SGB=25.5416;VDB=0.850278;EFF=INTRON(MODIFIER||||790|LOC_Os02g34850|protein_coding|CODING|LOC_Os02g34850.1|4|1) FN1485-S.SNP.2:20902565 chr02:020902565 0 W/20902565-20902565 FN1485-S Single Base Substitution G-A INTRON HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN1356-S.SNP.2:20905063 chr02:020905063 0 W/20905063-20905063 FN1356-S Single Base Substitution A-T INTRON HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2534-S.SNP.2:20907679 chr02:020907679 0 W/20907679-20907679 FN2534-S SNP T -> A AC=2;AN=198;BQB=0.998407;DP=4459;DP4=2251,2011,20,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.40753e-21;MQSB=0.983564;RPB=0.251382;SGB=133.622;VDB=0.0528386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.2:20911848 chr02:020911848 0 W/20911848-20911848 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.90782;DP=2812;DP4=1564,1151,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.94206e-10;MQSB=0.841357;RPB=0.800022;SGB=53.8699;VDB=0.361542;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.2:20913122 chr02:020913122 0 W/20913122-20913122 FN4010-S SNP A -> C AC=1;AN=168;BQB=0.946284;DP=2530;DP4=1236,1132,7,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97399e-12;MQSB=0.727308;RPB=0.987183;SGB=105.343;VDB=0.800868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.2:20913522 chr02:020913522 0 W/20913522-20913522 FN2178-S SNP C -> T AC=1;AN=168;BQB=0.119971;DP=3458;DP4=1426,1968,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.98833e-17;MQSB=0.763013;RPB=0.156796;SGB=-86.8983;VDB=0.410059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.2:20916218 chr02:020916218 0 W/20916218-20916218 FN2681-S SNP A -> G AC=2;AN=200;BQB=0.842972;DP=4697;DP4=2143,2311,30,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.11404e-28;MQSB=0.850705;RPB=0.987988;SGB=233.866;VDB=0.596821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y208C|453|LOC_Os02g34860|protein_coding|CODING|LOC_Os02g34860.1|5|1) FN3347-S.SNP.2:20924393 chr02:020924393 0 W/20924393-20924393 FN3347-S SNP G -> C AC=1;AN=184;BQB=0.336629;DP=2449;DP4=1074,1275,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.57169e-07;MQSB=0.908121;RPB=0.885736;SGB=46.3132;VDB=0.13015;EFF=INTRON(MODIFIER||||597|LOC_Os02g34884|protein_coding|CODING|LOC_Os02g34884.1|14|1) FN3753-S.SNP.2:20931742 chr02:020931742 0 W/20931742-20931742 FN3753-S SNP T -> A AC=1;AN=190;BQB=0.867801;DP=3231;DP4=1583,1550,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2331e-08;MQSB=0.985791;RPB=0.986677;SGB=28.7675;VDB=0.046255;EFF=INTRON(MODIFIER||||597|LOC_Os02g34884|protein_coding|CODING|LOC_Os02g34884.1|1|1) FN317-S.SNP.2:20932419 chr02:020932419 0 W/20932419-20932419 FN317-S Single Base Substitution C-A INTRON HOMO SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN768-S.SNP.2:20933158 chr02:020933158 0 W/20933158-20933158 FN768-S Single Base Substitution T-G INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN317-S.SNP.2:20936385 chr02:020936385 0 W/20936385-20936385 FN317-S Single Base Substitution C-G INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN2298.SNP.2:20947889 chr02:020947889 0 W/20947889-20947889 FN2298 SNP C -> T AC=1;AN=192;BQB=0.692047;DP=4674;DP4=2400,1941,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.61099e-13;MQSB=0.0289069;RPB=0.73915;SGB=54.5574;VDB=0.852398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C68Y|138|LOC_Os02g34910|protein_coding|CODING|LOC_Os02g34910.1|1|1) FN3910-S.SNP.2:20949560 chr02:020949560 0 W/20949560-20949560 FN3910-S SNP G -> A AC=1;AN=158;BQB=0.979232;DP=1978;DP4=1024,866,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000218447;MQSB=0.966739;RPB=0.936261;SGB=9.60209;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.2:20950753 chr02:020950753 0 W/20950753-20950753 FN2438 SNP G -> A AC=1;AN=200;BQB=0.596507;DP=4803;DP4=2550,1941,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.42155e-09;MQSB=0.0553379;RPB=0.699859;SGB=39.9056;VDB=0.273301;EFF=INTRON(MODIFIER||||144|LOC_Os02g34920|protein_coding|CODING|LOC_Os02g34920.1|1|1) FN-185.SNP.2:20953090 chr02:020953090 0 W/20953090-20953090 FN-185 Single Base Substitution C-T INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2556-S.SNP.2:20954144 chr02:020954144 0 W/20954144-20954144 FN2556-S SNP C -> A AC=1;AN=198;BQB=0.185238;DP=4030;DP4=1724,1992,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.13247e-08;MQSB=3.45887e-06;RPB=0.99022;SGB=37.1297;VDB=0.30385;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.2:20957265 chr02:020957265 0 W/20957265-20957265 FN-353 Single Base Substitution A-G UTR_3_PRIME HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN969-S.SNP.2:20958322 chr02:020958322 0 W/20958322-20958322 FN969-S Single Base Substitution C-T INTRON HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN4096-S.SNP.2:20961076 chr02:020961076 0 W/20961076-20961076 FN4096-S SNP A -> T AC=2;AN=182;BQB=0.371422;DP=3315;DP4=2040,1062,21,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.61134e-11;MQSB=0.966867;RPB=0.998942;SGB=120.796;VDB=0.860134;EFF=INTRON(MODIFIER||||545|LOC_Os02g34940|protein_coding|CODING|LOC_Os02g34940.1|2|1),INTRON(MODIFIER||||492|LOC_Os02g34940|protein_coding|CODING|LOC_Os02g34940.2|2|1) FN779-S.SNP.2:20968720 chr02:020968720 0 W/20968720-20968720 FN779-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. W674-4-1.SNP.2:20977696 chr02:020977696 0 W/20977696-20977696 W674-4-1 Single Base Substitution C-G INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2697-S.SNP.2:20979732 chr02:020979732 0 W/20979732-20979732 FN2697-S SNP T -> A AC=2;AN=200;BQB=0.742902;DP=5047;DP4=2458,2371,30,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.26821e-26;MQSB=0.627903;RPB=0.731093;SGB=159.24;VDB=0.360042;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.2:20987118 chr02:020987118 0 W/20987118-20987118 FN1240-S Single Base Substitution G-A INTRON HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3713-S.SNP.2:20987953 chr02:020987953 0 W/20987953-20987953 FN3713-S SNP G -> A AC=2;AN=190;BQB=0.950759;DP=2793;DP4=1275,1403,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.50031e-15;MQSB=0.922207;RPB=0.947554;SGB=121.957;VDB=0.0722181;EFF=INTRON(MODIFIER||||481|LOC_Os02g34990|protein_coding|CODING|LOC_Os02g34990.2|1|1) FN4100-S.SNP.2:20989222 chr02:020989222 0 W/20989222-20989222 FN4100-S SNP G -> A AC=2;AN=182;BQB=0.986448;DP=3100;DP4=1524,1480,27,15;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000645161;MQB=1.05321e-19;MQSB=0.947016;RPB=0.817378;SGB=183.948;VDB=0.176635;EFF=INTRON(MODIFIER||||481|LOC_Os02g34990|protein_coding|CODING|LOC_Os02g34990.2|1|1) FN1719-S.SNP.2:20991788 chr02:020991788 0 W/20991788-20991788 FN1719-S SNP T -> C AC=1;AN=188;BQB=0.00393148;DP=3602;DP4=1110,2453,4,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.37252e-08;MQSB=0.999495;RPB=0.0602535;SGB=-203.708;VDB=0.481147;EFF=INTRON(MODIFIER||||481|LOC_Os02g34990|protein_coding|CODING|LOC_Os02g34990.1|6|1),INTRON(MODIFIER||||481|LOC_Os02g34990|protein_coding|CODING|LOC_Os02g34990.2|6|1) FN4202-S.SNP.2:20999626 chr02:020999626 0 W/20999626-20999626 FN4202-S SNP T -> C AC=1;AN=170;BQB=0.988403;DP=2603;DP4=1173,1355,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.64906e-08;MQSB=0.969303;RPB=0.250773;SGB=17.4413;VDB=0.0284323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.2:21000170 chr02:021000170 0 W/21000170-21000170 FN1112-S Single Base Substitution A-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3445-S.SNP.2:21008542 chr02:021008542 0 W/21008542-21008542 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.921847;DP=3431;DP4=1777,1550,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.53368e-08;MQSB=0.894413;RPB=0.799492;SGB=57.786;VDB=0.392815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.2:21012830 chr02:021012830 0 W/21012830-21012830 FN1011-S Single Base Substitution G-T INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3659-S.SNP.2:21012866 chr02:021012866 0 W/21012866-21012866 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.933262;DP=2139;DP4=912,1146,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32692e-08;MQSB=0.870117;RPB=0.86901;SGB=62.7569;VDB=0.896364;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.2:21022131 chr02:021022131 0 W/21022131-21022131 FN-306 Single Base Substitution C-T INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2479.SNP.2:21027792 chr02:021027792 0 W/21027792-21027792 FN2479 SNP A -> G AC=1;AN=200;BQB=0.802819;DP=4124;DP4=2023,1686,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.10569e-12;MQSB=0.996769;RPB=0.439807;SGB=39.9056;VDB=0.99366;EFF=UTR_5_PRIME(MODIFIER||54||292|LOC_Os02g35039|protein_coding|CODING|LOC_Os02g35039.1|1|1),UTR_5_PRIME(MODIFIER||2570||167|LOC_Os02g35039|protein_coding|CODING|LOC_Os02g35039.2|1|1) FN3368-S.SNP.2:21055392 chr02:021055392 0 W/21055392-21055392 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.85375;DP=2884;DP4=1420,1383,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30641e-11;MQSB=0.993454;RPB=0.749718;SGB=67.4439;VDB=0.68596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P97S|1178|LOC_Os02g35080|protein_coding|CODING|LOC_Os02g35080.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P97S|1166|LOC_Os02g35080|protein_coding|CODING|LOC_Os02g35080.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P97S|1166|LOC_Os02g35080|protein_coding|CODING|LOC_Os02g35080.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P97S|1016|LOC_Os02g35080|protein_coding|CODING|LOC_Os02g35080.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P97S|933|LOC_Os02g35080|protein_coding|CODING|LOC_Os02g35080.5|2|1) FN786-S.SNP.2:21064027 chr02:021064027 0 W/21064027-21064027 FN786-S Single Base Substitution A-G INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN-182.SNP.2:21064772 chr02:021064772 0 W/21064772-21064772 FN-182 Single Base Substitution T-A INTRON HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2328.SNP.2:21066956 chr02:021066956 0 W/21066956-21066956 FN2328 SNP T -> A AC=2;AN=192;BQB=0.989026;DP=4825;DP4=2108,2396,31,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.19396e-31;MQSB=0.964425;RPB=0.984266;SGB=11.1913;VDB=0.968308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S110C|617|LOC_Os02g35100|protein_coding|CODING|LOC_Os02g35100.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S110C|617|LOC_Os02g35100|protein_coding|CODING|LOC_Os02g35100.2|4|1) FN-361.SNP.2:21073669 chr02:021073669 0 W/21073669-21073669 FN-361 Single Base Substitution C-T INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN1550-S.SNP.2:21078786 chr02:021078786 0 W/21078786-21078786 FN1550-S Single Base Substitution C-T INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN-6.SNP.2:21078812 chr02:021078812 0 W/21078812-21078812 FN-6 Single Base Substitution G-A INTERGENIC Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN3679-S.SNP.2:21082102 chr02:021082102 0 W/21082102-21082102 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.915346;DP=3194;DP4=1371,1567,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81292e-13;MQSB=0.693243;RPB=0.992332;SGB=49.1985;VDB=0.0902117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.2:21085311 chr02:021085311 0 W/21085311-21085311 FN3407-S SNP A -> G AC=2;AN=184;BQB=0.742128;DP=3578;DP4=1566,1787,17,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.03789e-17;MQSB=0.799746;RPB=0.58073;SGB=66.1455;VDB=0.328556;EFF=INTRON(MODIFIER||||330|LOC_Os02g35130|protein_coding|CODING|LOC_Os02g35130.1|2|1),INTRON(MODIFIER||||330|LOC_Os02g35130|protein_coding|CODING|LOC_Os02g35130.2|2|1) FN2673-S.SNP.2:21085746 chr02:021085746 0 W/21085746-21085746 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.48983;DP=4970;DP4=2241,2390,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.25263e-10;MQSB=0.717997;RPB=0.980814;SGB=-59.7054;VDB=0.475346;EFF=INTRON(MODIFIER||||330|LOC_Os02g35130|protein_coding|CODING|LOC_Os02g35130.1|2|1),INTRON(MODIFIER||||330|LOC_Os02g35130|protein_coding|CODING|LOC_Os02g35130.2|2|1) FN1617-S.SNP.2:21090153 chr02:021090153 0 W/21090153-21090153 FN1617-S Single Base Substitution T-C INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1348-S.SNP.2:21092145 chr02:021092145 0 W/21092145-21092145 FN1348-S Single Base Substitution C-G INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN762-S.SNP.2:21092145 chr02:021092145 0 W/21092145-21092145 FN762-S Single Base Substitution C-G INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1451-S.SNP.2:21094027 chr02:021094027 0 W/21094027-21094027 FN1451-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN695-S.SNP.2:21094027 chr02:021094027 0 W/21094027-21094027 FN695-S Single Base Substitution T-A INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2086-S.SNP.2:21094086 chr02:021094086 0 W/21094086-21094086 FN2086-S SNP T -> A AC=1;AN=168;BQB=0.321045;DP=4173;DP4=2243,1878,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01317e-16;MQSB=0.996602;RPB=0.0598448;SGB=-11.0644;VDB=0.0731754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.2:21094546 chr02:021094546 0 W/21094546-21094546 FN2532-S SNP T -> C AC=1;AN=198;BQB=0.930208;DP=4590;DP4=2010,2348,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.33743e-12;MQSB=0.88526;RPB=0.772949;SGB=-11.4553;VDB=0.270238;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.2:21097902 chr02:021097902 0 W/21097902-21097902 FN_769-4-1 Single Base Substitution C-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1275-S.SNP.2:21108171 chr02:021108171 0 W/21108171-21108171 FN1275-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN852-S.SNP.2:21109547 chr02:021109547 0 W/21109547-21109547 FN852-S Single Base Substitution C-G INTERGENIC HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN512-S.SNP.2:21112077 chr02:021112077 0 W/21112077-21112077 FN512-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g35150 splicing factor U2AF, putative, expressed SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN984-S.SNP.2:21114059 chr02:021114059 0 W/21114059-21114059 FN984-S Single Base Substitution C-T INTRON HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2263-S.SNP.2:21120418 chr02:021120418 0 W/21120418-21120418 FN2263-S SNP C -> A AC=1;AN=190;BQB=0.959803;DP=4981;DP4=2309,2381,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17307e-13;MQSB=0.986376;RPB=0.0792687;SGB=41.5369;VDB=0.0239417;EFF=INTRON(MODIFIER||||603|LOC_Os02g35160|protein_coding|CODING|LOC_Os02g35160.1|3|1),INTRON(MODIFIER||||451|LOC_Os02g35160|protein_coding|CODING|LOC_Os02g35160.2|3|1) FN3965-S.SNP.2:21129918 chr02:021129918 0 W/21129918-21129918 FN3965-S SNP G -> C AC=1;AN=168;BQB=0.885991;DP=2298;DP4=1047,1157,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.43293e-15;MQSB=0.952787;RPB=0.578864;SGB=109.773;VDB=0.0777594;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A158G|252|LOC_Os02g35180|protein_coding|CODING|LOC_Os02g35180.1|5|1) FN4105-S.SNP.2:21135404 chr02:021135404 0 W/21135404-21135404 FN4105-S SNP T -> C AC=1;AN=182;BQB=0.911786;DP=2940;DP4=1247,1599,5,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.19122e-11;MQSB=0.998;RPB=0.52502;SGB=75.6874;VDB=0.795823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.2:21138172 chr02:021138172 0 W/21138172-21138172 FN3416-S SNP G -> A AC=2;AN=184;BQB=0.998583;DP=2677;DP4=1395,1182,10,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.85082e-15;MQSB=0.984907;RPB=0.276679;SGB=74.4875;VDB=0.555114;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.2:21142359 chr02:021142359 0 W/21142359-21142359 FN742-S Single Base Substitution T-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN518-S.SNP.2:21159677 chr02:021159677 0 W/21159677-21159677 FN518-S Single Base Substitution T-C INTRON HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN1268-S.SNP.2:21159735 chr02:021159735 0 W/21159735-21159735 FN1268-S Single Base Substitution C-A INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1064-S.SNP.2:21163763 chr02:021163763 0 W/21163763-21163763 FN1064-S Single Base Substitution T-C INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2268-S.SNP.2:21164700 chr02:021164700 0 W/21164700-21164700 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.159228;DP=4900;DP4=2086,2252,21,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34895e-19;MQSB=0.848256;RPB=0.788936;SGB=90.0605;VDB=0.869568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.2:21167184 chr02:021167184 0 W/21167184-21167184 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.984725;DP=2271;DP4=1211,1005,5,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.43077e-05;MQSB=0.99848;RPB=0.97507;SGB=25.6601;VDB=0.651061;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G169|947|LOC_Os02g35210|protein_coding|CODING|LOC_Os02g35210.1|1|1) FN2185-S.SNP.2:21172795 chr02:021172795 0 W/21172795-21172795 FN2185-S SNP T -> G AC=1;AN=190;BQB=0.790884;DP=5035;DP4=2202,2496,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00019861;MQB=3.1802e-07;MQSB=0.693357;RPB=0.785208;SGB=44.5415;VDB=0.266813;EFF=INTRON(MODIFIER||||389|LOC_Os02g35220|protein_coding|CODING|LOC_Os02g35220.1|1|1) W721-2-1.SNP.2:21174827 chr02:021174827 0 W/21174827-21174827 W721-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN1324-S.SNP.2:21179355 chr02:021179355 0 W/21179355-21179355 FN1324-S Single Base Substitution A-G INTRON HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1543-S.SNP.2:21193717 chr02:021193717 0 W/21193717-21193717 FN1543-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os02g35270 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1666-S.SNP.2:21195008 chr02:021195008 0 W/21195008-21195008 FN1666-S SNP C -> G AC=2;AN=188;BQB=0.737195;DP=3333;DP4=2024,1259,19,6;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.113411;MQB=0.591595;MQSB=0;RPB=0.989386;SGB=19.4279;VDB=0.979513;EFF=INTRON(MODIFIER||||522|LOC_Os02g35270|protein_coding|CODING|LOC_Os02g35270.1|2|1) FN1097-S.SNP.2:21195249 chr02:021195249 0 W/21195249-21195249 FN1097-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g35270 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN621-S.SNP.2:21199712 chr02:021199712 0 W/21199712-21199712 FN621-S Single Base Substitution T-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN321-S.SNP.2:21204885 chr02:021204885 0 W/21204885-21204885 FN321-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN776-S.SNP.2:21205239 chr02:021205239 0 W/21205239-21205239 FN776-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g35280 retrotransposon protein, putative, unclassified SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3558-S.SNP.2:21208892 chr02:021208892 0 W/21208892-21208892 FN3558-S SNP G -> T AC=1;AN=188;BQB=0.946752;DP=2827;DP4=1365,1391,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.17478e-10;MQSB=0.785111;RPB=0.894151;SGB=46.6141;VDB=0.0514699;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A686|1434|LOC_Os02g35290|protein_coding|CODING|LOC_Os02g35290.1|4|1) FN3577-S.SNP.2:21215248 chr02:021215248 0 W/21215248-21215248 FN3577-S SNP T -> C AC=1;AN=188;BQB=0.991708;DP=2920;DP4=1111,1726,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33854e-10;MQSB=0.967553;RPB=0.796983;SGB=46.6141;VDB=0.653247;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.2:21218680 chr02:021218680 0 W/21218680-21218680 FN698-S Single Base Substitution A-T INTERGENIC HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1760-S.SNP.2:21237733 chr02:021237733 0 W/21237733-21237733 FN1760-S SNP A -> C AC=1;AN=188;BQB=0.000324822;DP=4183;DP4=2072,2053,17,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29453e-07;MQSB=0.919524;RPB=0.986687;SGB=-409.513;VDB=0.735396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.2:21241804 chr02:021241804 0 W/21241804-21241804 FN2557-S SNP A -> G AC=2;AN=198;BQB=0.999764;DP=4528;DP4=2357,1918,11,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000220848;MQB=1.07621e-16;MQSB=0.944533;RPB=0.994507;SGB=26.8957;VDB=0.32457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.2:21245165 chr02:021245165 0 W/21245165-21245165 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.972256;DP=2936;DP4=1549,1302,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.0156676;MQB=1.07028e-06;MQSB=0.000184682;RPB=0.131803;SGB=71.6954;VDB=0.326928;EFF=INTRON(MODIFIER||||418|LOC_Os02g35320|protein_coding|CODING|LOC_Os02g35320.1|4|1) FN1450-S.SNP.2:21299431 chr02:021299431 0 W/21299431-21299431 FN1450-S Single Base Substitution C-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN2247-S.SNP.2:21299433 chr02:021299433 0 W/21299433-21299433 FN2247-S SNP A -> C AC=1;AN=190;BQB=0.999972;DP=4941;DP4=2590,2082,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33419e-06;MQSB=0.281732;RPB=0.984954;SGB=36.1006;VDB=0.619011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.2:21307827 chr02:021307827 0 W/21307827-21307827 FN2780-S SNP C -> A AC=1;AN=198;BQB=0.85829;DP=3635;DP4=1761,1660,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00165062;MQB=6.98861e-05;MQSB=0.0122136;RPB=0.865728;SGB=18.9639;VDB=0.0965274;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.2:21309215 chr02:021309215 0 W/21309215-21309215 FN-283 Single Base Substitution C-T INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2580-S.SNP.2:21310078 chr02:021310078 0 W/21310078-21310078 FN2580-S SNP T -> C AC=2;AN=198;BQB=0.407871;DP=3659;DP4=1548,1876,16,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.03318e-22;MQSB=0.643435;RPB=0.924948;SGB=169.022;VDB=0.464183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.2:21317992 chr02:021317992 0 W/21317992-21317992 FN3924-S SNP T -> A AC=1;AN=158;BQB=0.973742;DP=3020;DP4=1487,1438,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.81844e-07;MQSB=0.903106;RPB=0.97845;SGB=16.7104;VDB=0.56783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.2:21317993 chr02:021317993 0 W/21317993-21317993 FN2582-S SNP A -> T AC=1;AN=198;BQB=0.934966;DP=4590;DP4=2223,2170,10,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000217865;MQB=2.5738e-08;MQSB=0.865423;RPB=0.366191;SGB=54.144;VDB=0.190299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.2:21322150 chr02:021322150 0 W/21322150-21322150 FN3941-S SNP C -> A AC=2;AN=168;BQB=0.673872;DP=2345;DP4=1150,1109,14,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.63433e-10;MQSB=0.97307;RPB=0.371153;SGB=48.9237;VDB=0.087703;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H175Q|653|LOC_Os02g35470|protein_coding|CODING|LOC_Os02g35470.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H175Q|652|LOC_Os02g35470|protein_coding|CODING|LOC_Os02g35470.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H175Q|652|LOC_Os02g35470|protein_coding|CODING|LOC_Os02g35470.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H175Q|652|LOC_Os02g35470|protein_coding|CODING|LOC_Os02g35470.4|5|1) FN2685-S.SNP.2:21326421 chr02:021326421 0 W/21326421-21326421 FN2685-S SNP G -> A AC=1;AN=200;BQB=0.547045;DP=4940;DP4=2303,2377,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46234e-08;MQSB=0.820234;RPB=0.762799;SGB=63.4749;VDB=0.864048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T358M|595|LOC_Os02g35480|protein_coding|CODING|LOC_Os02g35480.1|4|1) FN3917-S.SNP.2:21326833 chr02:021326833 0 W/21326833-21326833 FN3917-S SNP G -> C AC=1;AN=158;BQB=0.990286;DP=2381;DP4=1194,1082,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.90521e-10;MQSB=0.973861;RPB=0.920569;SGB=68.9144;VDB=0.571253;EFF=INTRON(MODIFIER||||595|LOC_Os02g35480|protein_coding|CODING|LOC_Os02g35480.1|3|1) FN2362.SNP.2:21329646 chr02:021329646 0 W/21329646-21329646 FN2362 SNP C -> T AC=2;AN=192;BQB=0.00518837;DP=3431;DP4=1683,1348,13,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00029146;MQB=1.62425e-06;MQSB=0.952444;RPB=0.968128;SGB=103.983;VDB=0.448241;EFF=UTR_5_PRIME(MODIFIER||879||595|LOC_Os02g35480|protein_coding|CODING|LOC_Os02g35480.1|1|1) FN1450-S.SNP.2:21338992 chr02:021338992 0 W/21338992-21338992 FN1450-S Single Base Substitution G-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN2142-S.SNP.2:21339428 chr02:021339428 0 W/21339428-21339428 FN2142-S SNP G -> A AC=1;AN=168;BQB=0.0126375;DP=4240;DP4=1903,2274,13,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.55951e-05;MQSB=0.958398;RPB=0.943502;SGB=-211.183;VDB=0.825099;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.2:21343655 chr02:021343655 0 W/21343655-21343655 FN1038-S Single Base Substitution T-C INTERGENIC HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1093-S.SNP.2:21356307 chr02:021356307 0 W/21356307-21356307 FN1093-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g35520 retrotransposon protein, putative, unclassified SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN832-S.SNP.2:21360043 chr02:021360043 0 W/21360043-21360043 FN832-S Single Base Substitution C-T INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN1224-S.SNP.2:21360200 chr02:021360200 0 W/21360200-21360200 FN1224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1916.SNP.2:21360200 chr02:021360200 0 W/21360200-21360200 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN825-S.SNP.2:21360509 chr02:021360509 0 W/21360509-21360509 FN825-S Single Base Substitution A-G INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN825-S.SNP.2:21360510 chr02:021360510 0 W/21360510-21360510 FN825-S Single Base Substitution A-C INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3039-S.SNP.2:21368267 chr02:021368267 0 W/21368267-21368267 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.846723;DP=2922;DP4=1469,1269,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.12227e-05;MQSB=0.951896;RPB=0.789662;SGB=44.2207;VDB=0.0192408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.2:21370549 chr02:021370549 0 W/21370549-21370549 FN1442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN_807-3-1.SNP.2:21379150 chr02:021379150 0 W/21379150-21379150 FN_807-3-1 Single Base Substitution C-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN3632-S.SNP.2:21379204 chr02:021379204 0 W/21379204-21379204 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.985596;DP=2802;DP4=1225,1495,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.72542e-08;MQSB=0.775413;RPB=0.977686;SGB=36.1006;VDB=0.881805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.2:21379491 chr02:021379491 0 W/21379491-21379491 FN-316 Single Base Substitution T-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2579-S.SNP.2:21386325 chr02:021386325 0 W/21386325-21386325 FN2579-S SNP G -> A AC=1;AN=198;BQB=0.819614;DP=4119;DP4=2061,1838,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000242777;MQB=1.68205e-05;MQSB=0.0015799;RPB=0.619008;SGB=65.3149;VDB=0.215473;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.2:21395296 chr02:021395296 0 W/21395296-21395296 FN970-S Single Base Substitution A-G INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN3280-S.SNP.2:21396320 chr02:021396320 0 W/21396320-21396320 FN3280-S SNP C -> T AC=1;AN=184;BQB=0.95536;DP=3001;DP4=1358,1549,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27748e-06;MQSB=0.988028;RPB=0.789899;SGB=32.2261;VDB=0.272591;EFF=UTR_3_PRIME(MODIFIER||198||883|LOC_Os02g35560|protein_coding|CODING|LOC_Os02g35560.1|1|1) FN845-S.SNP.2:21400612 chr02:021400612 0 W/21400612-21400612 FN845-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN984-S.SNP.2:21405002 chr02:021405002 0 W/21405002-21405002 FN984-S Single Base Substitution G-T INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN654-S.SNP.2:21409321 chr02:021409321 0 W/21409321-21409321 FN654-S Single Base Substitution G-T INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-147.SNP.2:21413424 chr02:021413424 0 W/21413424-21413424 FN-147 Single Base Substitution C-T INTRON HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN1292-S.SNP.2:21434083 chr02:021434083 0 W/21434083-21434083 FN1292-S Single Base Substitution T-C INTRON HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN-349.SNP.2:21438299 chr02:021438299 0 W/21438299-21438299 FN-349 Single Base Substitution A-T INTRON HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2351.SNP.2:21442391 chr02:021442391 0 W/21442391-21442391 FN2351 SNP C -> G AC=1;AN=192;BQB=0.844036;DP=3932;DP4=1702,2015,9,20;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.57133e-10;MQSB=0.05134;RPB=0.383845;SGB=93.2452;VDB=0.150452;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.2:21447494 chr02:021447494 0 W/21447494-21447494 FN4023-S SNP C -> A AC=1;AN=168;BQB=0.485494;DP=2741;DP4=1549,1069,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.00496e-06;MQSB=0.998129;RPB=0.66103;SGB=17.3231;VDB=0.806606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.2:21450013 chr02:021450013 0 W/21450013-21450013 FN1572-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g35690 transcription factor like protein, putative, expressed SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN482-S.SNP.2:21451208 chr02:021451208 0 W/21451208-21451208 FN482-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g35690 transcription factor like protein, putative, expressed SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN1557-S.SNP.2:21452567 chr02:021452567 0 W/21452567-21452567 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2390.SNP.2:21453372 chr02:021453372 0 W/21453372-21453372 FN2390 SNP T -> G AC=1;AN=200;BQB=0.541481;DP=4316;DP4=1960,2087,8,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.11542e-05;MQSB=4.8004e-06;RPB=0.863654;SGB=32.0901;VDB=0.914506;EFF=INTRON(MODIFIER||||181|LOC_Os02g35700|protein_coding|CODING|LOC_Os02g35700.1|1|1),INTRON(MODIFIER||||137|LOC_Os02g35700|protein_coding|CODING|LOC_Os02g35700.2|1|1),INTRON(MODIFIER||||133|LOC_Os02g35700|protein_coding|CODING|LOC_Os02g35700.3|1|1) FN756-S.SNP.2:21454518 chr02:021454518 0 W/21454518-21454518 FN756-S Single Base Substitution T-A INTRON HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN4136-S.SNP.2:21474131 chr02:021474131 0 W/21474131-21474131 FN4136-S SNP G -> A AC=2;AN=170;BQB=0.574585;DP=2629;DP4=1355,1188,17,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15213e-11;MQSB=0.999917;RPB=0.964549;SGB=101.184;VDB=0.527999;EFF=INTRON(MODIFIER||||554|LOC_Os02g35750|protein_coding|CODING|LOC_Os02g35750.2|1|1),INTRON(MODIFIER||||342|LOC_Os02g35750|protein_coding|CODING|LOC_Os02g35750.3|1|1) FN-187.SNP.2:21476068 chr02:021476068 0 W/21476068-21476068 FN-187 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN_N1-130-1.SNP.2:21481439 chr02:021481439 0 W/21481439-21481439 FN_N1-130-1 Single Base Substitution C-A Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1640-S.SNP.2:21484120 chr02:021484120 0 W/21484120-21484120 FN1640-S Single Base Substitution T-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN4185-S.SNP.2:21484488 chr02:021484488 0 W/21484488-21484488 FN4185-S SNP C -> A AC=1;AN=170;BQB=0.696386;DP=2318;DP4=1006,1252,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.35745e-05;MQSB=0.973942;RPB=0.568834;SGB=43.4296;VDB=0.180062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.2:21491825 chr02:021491825 0 W/21491825-21491825 FN2529-S SNP T -> C AC=1;AN=198;BQB=0.894279;DP=3643;DP4=1863,1619,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26677e-06;MQSB=0.985921;RPB=0.797615;SGB=11.1786;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.2:21493248 chr02:021493248 0 W/21493248-21493248 FN1175-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3444-S.SNP.2:21496892 chr02:021496892 0 W/21496892-21496892 FN3444-S SNP A -> C AC=1;AN=184;BQB=0.903949;DP=2619;DP4=1311,1225,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84972e-08;MQSB=0.949431;RPB=0.873944;SGB=53.2642;VDB=0.856873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.2:21498334 chr02:021498334 0 W/21498334-21498334 FN1266-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN-228.SNP.2:21515964 chr02:021515964 0 W/21515964-21515964 FN-228 Single Base Substitution C-G INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1682-S.SNP.2:21516441 chr02:021516441 0 W/21516441-21516441 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.259912;DP=4407;DP4=1939,2391,17,27;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.1842e-22;MQSB=0.998718;RPB=0.924516;SGB=-145.401;VDB=0.999419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.2:21524567 chr02:021524567 0 W/21524567-21524567 FN3385-S SNP C -> T AC=2;AN=184;BQB=0.969008;DP=2922;DP4=1536,1251,7,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.12923e-07;MQSB=0.949088;RPB=0.57539;SGB=44.2207;VDB=0.537886;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.2:21539301 chr02:021539301 0 W/21539301-21539301 FN-386 Single Base Substitution T-C INTERGENIC HOMO SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3325-S.SNP.2:21542265 chr02:021542265 0 W/21542265-21542265 FN3325-S SNP G -> T AC=1;AN=184;BQB=0.922618;DP=2802;DP4=1407,1300,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.31776e-07;MQSB=0.99975;RPB=0.939074;SGB=13.188;VDB=0.389077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.2:21554453 chr02:021554453 0 W/21554453-21554453 FN2411 SNP T -> A AC=2;AN=200;BQB=0.905063;DP=3775;DP4=1451,1710,19,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000264901;MQB=1.77551e-17;MQSB=0.0553699;RPB=0.828623;SGB=69.3772;VDB=0.0459979;EFF=UTR_5_PRIME(MODIFIER||1071||352|LOC_Os02g35870|protein_coding|CODING|LOC_Os02g35870.1|1|1),INTRON(MODIFIER||||400|LOC_Os02g35870|protein_coding|CODING|LOC_Os02g35870.2|1|1) FN803-S.SNP.2:21559211 chr02:021559211 0 W/21559211-21559211 FN803-S Single Base Substitution G-T INTRON HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN_935-1.SNP.2:21566355 chr02:021566355 0 W/21566355-21566355 FN_935-1 Single Base Substitution G-A Homo LOC_Os02g35900 thioredoxin, putative, expressed SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN-226.SNP.2:21567468 chr02:021567468 0 W/21567468-21567468 FN-226 Single Base Substitution T-G INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3505-S.SNP.2:21572300 chr02:021572300 0 W/21572300-21572300 FN3505-S SNP T -> G AC=2;AN=188;BQB=0.737824;DP=2165;DP4=692,1183,12,13;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=3.42768e-08;MQSB=0.875974;RPB=0.725727;SGB=78.5038;VDB=0.0958133;EFF=INTRON(MODIFIER||||442|LOC_Os02g35910|protein_coding|CODING|LOC_Os02g35910.1|4|1) FN406-S.SNP.2:21575586 chr02:021575586 0 W/21575586-21575586 FN406-S Single Base Substitution G-A INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN589-S.SNP.2:21587693 chr02:021587693 0 W/21587693-21587693 FN589-S Single Base Substitution A-G INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN936-S.SNP.2:21589998 chr02:021589998 0 W/21589998-21589998 FN936-S Single Base Substitution G-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2478.SNP.2:21595143 chr02:021595143 0 W/21595143-21595143 FN2478 SNP A -> C AC=2;AN=200;BQB=0.889165;DP=4456;DP4=2036,2168,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.45854e-23;MQSB=0.879682;RPB=0.951171;SGB=173.999;VDB=0.716295;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.2:21595622 chr02:021595622 0 W/21595622-21595622 FN495-S Single Base Substitution C-A INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3764-S.SNP.2:21596172 chr02:021596172 0 W/21596172-21596172 FN3764-S SNP C -> T AC=2;AN=190;BQB=0.842101;DP=2010;DP4=752,1160,6,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.16093e-06;MQSB=0.00389056;RPB=0.707851;SGB=39.6545;VDB=0.0452691;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.2:21597533 chr02:021597533 0 W/21597533-21597533 FN4179-S SNP T -> A AC=2;AN=170;BQB=0.720039;DP=2429;DP4=1291,1043,16,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15426e-16;MQSB=0.604555;RPB=0.680247;SGB=150.053;VDB=0.281885;EFF=INTRON(MODIFIER||||312|LOC_Os02g35950|protein_coding|CODING|LOC_Os02g35950.1|1|1) FN-335.SNP.2:21599967 chr02:021599967 0 W/21599967-21599967 FN-335 Single Base Substitution A-T INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3943-S.SNP.2:21603551 chr02:021603551 0 W/21603551-21603551 FN3943-S SNP A -> T AC=1;AN=168;BQB=0.810112;DP=2963;DP4=1347,1463,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.35942e-09;MQSB=0.962272;RPB=0.443816;SGB=51.902;VDB=0.883343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.2:21608091 chr02:021608091 0 W/21608091-21608091 FN3439-S SNP T -> C AC=1;AN=184;BQB=0.91332;DP=2699;DP4=1326,1281,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.1372e-09;MQSB=0.882708;RPB=0.999467;SGB=23.2751;VDB=0.192969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.2:21610473 chr02:021610473 0 W/21610473-21610473 FN3740-S SNP A -> G AC=1;AN=190;BQB=0.996098;DP=3096;DP4=1492,1500,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000322997;MQB=5.21059e-08;MQSB=0.965361;RPB=0.68274;SGB=39.6545;VDB=0.694132;EFF=INTRON(MODIFIER||||762|LOC_Os02g35970|protein_coding|CODING|LOC_Os02g35970.1|4|1) FN590-S.SNP.2:21615690 chr02:021615690 0 W/21615690-21615690 FN590-S Single Base Substitution T-G INTERGENIC HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN-205.SNP.2:21627550 chr02:021627550 0 W/21627550-21627550 FN-205 Single Base Substitution A-C INTERGENIC HET SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3394-S.SNP.2:21641833 chr02:021641833 0 W/21641833-21641833 FN3394-S SNP C -> A AC=1;AN=184;BQB=0.659983;DP=3135;DP4=1250,1780,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.12633e-09;MQSB=0.8058;RPB=0.8415;SGB=49.835;VDB=0.80057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K94N|1609|LOC_Os02g36020|protein_coding|CODING|LOC_Os02g36020.1|4|1) FN3522-S.SNP.2:21643785 chr02:021643785 0 W/21643785-21643785 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.800458;DP=2757;DP4=1105,1555,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72155e-05;MQSB=0.99994;RPB=0.93247;SGB=28.8977;VDB=0.0270917;EFF=INTRON(MODIFIER||||1609|LOC_Os02g36020|protein_coding|CODING|LOC_Os02g36020.1|1|1) FN874-S.SNP.2:21644776 chr02:021644776 0 W/21644776-21644776 FN874-S Single Base Substitution G-A INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3854-S.SNP.2:21645094 chr02:021645094 0 W/21645094-21645094 FN3854-S SNP G -> C AC=1;AN=158;BQB=0.955271;DP=2630;DP4=1326,1183,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000760456;MQB=1.5931e-09;MQSB=0.992263;RPB=0.999952;SGB=57.6596;VDB=0.493794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1547-S.SNP.2:21646131 chr02:021646131 0 W/21646131-21646131 FN1547-S Single Base Substitution G-T INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN3302-S.SNP.2:21653343 chr02:021653343 0 W/21653343-21653343 FN3302-S SNP C -> T AC=1;AN=184;BQB=0.950419;DP=3165;DP4=1698,1381,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.55514e-07;MQSB=0.050696;RPB=0.841529;SGB=32.2261;VDB=0.598947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.2:21660123 chr02:021660123 0 W/21660123-21660123 FN2713-S SNP A -> G AC=1;AN=200;BQB=0.0551394;DP=5144;DP4=2562,2379,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.86307e-14;MQSB=0.65188;RPB=0.998417;SGB=22.3313;VDB=0.148768;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.2:21661747 chr02:021661747 0 W/21661747-21661747 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.965694;DP=2790;DP4=1213,1508,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.58721e-05;MQSB=0.0385742;RPB=0.812163;SGB=30.8063;VDB=0.939575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.2:21662343 chr02:021662343 0 W/21662343-21662343 FN2491 SNP A -> G AC=1;AN=200;BQB=0.246867;DP=4697;DP4=1933,2459,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.2236e-06;MQSB=0.881544;RPB=0.122422;SGB=19.0642;VDB=0.1621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.2:21666373 chr02:021666373 0 W/21666373-21666373 FN2134-S SNP T -> C AC=1;AN=168;BQB=0.561622;DP=2776;DP4=991,1752,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.52002e-12;MQSB=0.578765;RPB=0.963576;SGB=69.0561;VDB=0.311615;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.2:21671853 chr02:021671853 0 W/21671853-21671853 FN1476-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2451.SNP.2:21673000 chr02:021673000 0 W/21673000-21673000 FN2451 SNP T -> G AC=1;AN=200;BQB=0.919308;DP=4903;DP4=2244,2339,13,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0528248;MQB=4.56544e-06;MQSB=1.57928e-05;RPB=0.536328;SGB=72.7161;VDB=0.45258;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cCa|Q201P|689|LOC_Os02g36050|protein_coding|CODING|LOC_Os02g36050.1|1|1) FN3438-S.SNP.2:21673332 chr02:021673332 0 W/21673332-21673332 FN3438-S SNP A -> G AC=2;AN=184;BQB=0.883709;DP=2704;DP4=1328,1256,19,10;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.010355;MQB=2.0339e-11;MQSB=2.93423e-10;RPB=0.974242;SGB=92.0965;VDB=0.852117;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G90|689|LOC_Os02g36050|protein_coding|CODING|LOC_Os02g36050.1|1|1) FN3369-S.SNP.2:21696292 chr02:021696292 0 W/21696292-21696292 FN3369-S SNP C -> T AC=2;AN=184;BQB=0.594684;DP=3492;DP4=1564,1721,23,32;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.38363e-28;MQSB=0.993483;RPB=0.77406;SGB=237.67;VDB=0.271406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.2:21697690 chr02:021697690 0 W/21697690-21697690 FN2325 SNP C -> A AC=1;AN=192;BQB=0.548083;DP=5074;DP4=2167,2540,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197083;MQB=1.60792e-06;MQSB=0.716604;RPB=0.93438;SGB=29.087;VDB=0.186444;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.2:21719823 chr02:021719823 0 W/21719823-21719823 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.91776;DP=3162;DP4=1348,1582,14,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00442758;MQB=5.4336e-06;MQSB=4.73582e-09;RPB=0.905121;SGB=77.1196;VDB=0.201148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.2:21721007 chr02:021721007 0 W/21721007-21721007 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.820303;DP=3427;DP4=1768,1431,10,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.0020426;MQB=8.72344e-10;MQSB=0.476985;RPB=0.619204;SGB=81.7147;VDB=0.280204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.2:21721009 chr02:021721009 0 W/21721009-21721009 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.588477;DP=3470;DP4=1784,1405,11,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00172911;MQB=4.82805e-11;MQSB=0.0593546;RPB=0.981511;SGB=61.7198;VDB=0.444942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.2:21721624 chr02:021721624 0 W/21721624-21721624 FN2337 SNP A -> C AC=1;AN=192;BQB=0.687944;DP=4889;DP4=2538,1887,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.08404e-09;MQSB=0.00911959;RPB=0.908374;SGB=-10.8182;VDB=0.889838;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.2:21726743 chr02:021726743 0 W/21726743-21726743 FN2335 SNP T -> A AC=1;AN=192;BQB=0.259616;DP=5127;DP4=2681,1993,15,19;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0241857;MQB=0.0178894;MQSB=0.00020286;RPB=0.972643;SGB=-120.288;VDB=0.784802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S568T|1434|LOC_Os02g36100|protein_coding|CODING|LOC_Os02g36100.1|7|1) FN2500.SNP.2:21739163 chr02:021739163 0 W/21739163-21739163 FN2500 SNP T -> C AC=1;AN=200;BQB=0.981793;DP=4858;DP4=2094,2437,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.83075e-17;MQSB=0.977314;RPB=0.778854;SGB=30.3571;VDB=0.989651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.2:21745621 chr02:021745621 0 W/21745621-21745621 FN3417-S SNP A -> T AC=2;AN=184;BQB=0.347915;DP=3169;DP4=1711,1269,22,19;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000631114;MQB=2.08867e-17;MQSB=0.000879137;RPB=0.998221;SGB=43.3252;VDB=0.0302698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.2:21748768 chr02:021748768 0 W/21748768-21748768 FN2312 SNP C -> T AC=1;AN=192;BQB=0.497824;DP=4605;DP4=1920,2040,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000217155;MQB=1.36364e-10;MQSB=0.571338;RPB=0.0789317;SGB=-88.6243;VDB=0.399369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.2:21749871 chr02:021749871 0 W/21749871-21749871 FN1118-S Single Base Substitution A-C INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN4260-S.SNP.2:21750086 chr02:021750086 0 W/21750086-21750086 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.835216;DP=2650;DP4=1444,1118,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.24455e-15;MQSB=0.946749;RPB=0.724583;SGB=110.069;VDB=0.52746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.2:21751281 chr02:021751281 0 W/21751281-21751281 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.929573;DP=4400;DP4=2238,1903,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23734e-07;MQSB=0.889595;RPB=0.201867;SGB=19.0642;VDB=0.0907686;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.2:21757495 chr02:021757495 0 W/21757495-21757495 FN_N1-119-1 Single Base Substitution C-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN765-S.SNP.2:21762658 chr02:021762658 0 W/21762658-21762658 FN765-S Single Base Substitution G-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN373-S.SNP.2:21768795 chr02:021768795 0 W/21768795-21768795 FN373-S Single Base Substitution A-G INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2573-S.SNP.2:21768890 chr02:021768890 0 W/21768890-21768890 FN2573-S SNP C -> T AC=2;AN=198;BQB=0.961392;DP=4253;DP4=2295,1694,16,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.29412e-18;MQSB=0.985819;RPB=0.975163;SGB=68.2711;VDB=0.198218;EFF=INTRON(MODIFIER||||829|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.2|3|1),INTRON(MODIFIER||||597|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.3|3|1),INTRON(MODIFIER||||493|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.4|3|1),INTRON(MODIFIER||||476|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.5|3|1) FN4203-S.SNP.2:21768890 chr02:021768890 0 W/21768890-21768890 FN4203-S SNP C -> T AC=2;AN=170;BQB=0.8391;DP=2329;DP4=1346,904,19,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.27862e-15;MQSB=0.998944;RPB=0.229092;SGB=83.0751;VDB=0.354132;EFF=INTRON(MODIFIER||||829|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.2|3|1),INTRON(MODIFIER||||597|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.3|3|1),INTRON(MODIFIER||||493|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.4|3|1),INTRON(MODIFIER||||476|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.5|3|1) FN2465.SNP.2:21773208 chr02:021773208 0 W/21773208-21773208 FN2465 SNP T -> C AC=2;AN=200;BQB=0.354904;DP=4292;DP4=1867,2083,25,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.7584e-30;MQSB=0.78005;RPB=0.634833;SGB=70.4864;VDB=0.222288;EFF=UTR_3_PRIME(MODIFIER||212||829|LOC_Os02g36140|protein_coding|CODING|LOC_Os02g36140.2|14|1) FN550-S.SNP.2:21774048 chr02:021774048 0 W/21774048-21774048 FN550-S Single Base Substitution T-C INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN3595-S.SNP.2:21776529 chr02:021776529 0 W/21776529-21776529 FN3595-S SNP C -> A AC=1;AN=190;BQB=0.585325;DP=2801;DP4=1289,1405,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74234e-07;MQSB=0.960858;RPB=0.868495;SGB=58.2031;VDB=0.411966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.2:21777484 chr02:021777484 0 W/21777484-21777484 FN1363-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3412-S.SNP.2:21789115 chr02:021789115 0 W/21789115-21789115 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.949615;DP=2827;DP4=1122,1596,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000335358;MQSB=0.000786472;RPB=0.863463;SGB=26.1347;VDB=0.266982;EFF=INTRON(MODIFIER||||515|LOC_Os02g36150|protein_coding|CODING|LOC_Os02g36150.1|1|1) FN967-S.SNP.2:21789838 chr02:021789838 0 W/21789838-21789838 FN967-S Single Base Substitution T-C INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN3390-S.SNP.2:21790598 chr02:021790598 0 W/21790598-21790598 FN3390-S SNP C -> G AC=1;AN=184;BQB=0.895144;DP=2580;DP4=1253,1248,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33011e-06;MQSB=0.999997;RPB=0.661088;SGB=35.1773;VDB=0.620767;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P377R|515|LOC_Os02g36150|protein_coding|CODING|LOC_Os02g36150.1|2|1) FN2422.SNP.2:21796548 chr02:021796548 0 W/21796548-21796548 FN2422 SNP G -> A AC=1;AN=200;BQB=0.979174;DP=2715;DP4=1158,1356,5,6;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0666667;MQB=0.517834;MQSB=1.57044e-19;RPB=0.839638;SGB=45.0543;VDB=0.646442;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.2:21796919 chr02:021796919 0 W/21796919-21796919 FN347-S Single Base Substitution C-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN347-S.SNP.2:21796920 chr02:021796920 0 W/21796920-21796920 FN347-S Single Base Substitution T-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2377.SNP.2:21802981 chr02:021802981 0 W/21802981-21802981 FN2377 SNP C -> T AC=1;AN=192;BQB=0.000599562;DP=6736;DP4=2568,3564,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=17;MQ0F=0.284887;MQB=0.00337408;MQSB=0;RPB=0.532974;SGB=-80.293;VDB=0.831005;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.2:21814963 chr02:021814963 0 W/21814963-21814963 FN677-S Single Base Substitution G-A INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN320-S.SNP.2:21819142 chr02:021819142 0 W/21819142-21819142 FN320-S Single Base Substitution T-C INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN-397.SNP.2:21823838 chr02:021823838 0 W/21823838-21823838 FN-397 Single Base Substitution C-G INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2582-S.SNP.2:21830041 chr02:021830041 0 W/21830041-21830041 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.993861;DP=4222;DP4=2166,1666,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.2527e-05;MQSB=0.928526;RPB=0.236001;SGB=-0.221308;VDB=0.479045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.2:21835254 chr02:021835254 0 W/21835254-21835254 FN2150-S SNP T -> G AC=1;AN=168;BQB=0.794353;DP=3972;DP4=2036,1911,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51102e-06;MQSB=0.971577;RPB=0.237252;SGB=-16.665;VDB=0.0347449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1677-S.SNP.2:21838376 chr02:021838376 0 W/21838376-21838376 FN1677-S SNP C -> T AC=1;AN=188;BQB=0.981367;DP=2423;DP4=1097,1301,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16651e-08;MQSB=0.999738;RPB=0.861001;SGB=0.908326;VDB=0.5463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.2:21843589 chr02:021843589 0 W/21843589-21843589 FN2656-S SNP T -> G AC=1;AN=200;BQB=0.784502;DP=5218;DP4=2725,2288,25,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42604e-24;MQSB=0.72277;RPB=0.715455;SGB=130.399;VDB=0.128373;EFF=INTRON(MODIFIER||||800|LOC_Os02g36210|protein_coding|CODING|LOC_Os02g36210.1|3|1) FN1262-S.SNP.2:21845783 chr02:021845783 0 W/21845783-21845783 FN1262-S Single Base Substitution G-T INTRON HOMO SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2751-S.SNP.2:21847415 chr02:021847415 0 W/21847415-21847415 FN2751-S SNP A -> G AC=2;AN=200;BQB=0.997313;DP=2430;DP4=315,1963,2,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.54365e-10;MQSB=0.910855;RPB=0.930924;SGB=54.6902;VDB=0.379795;EFF=UTR_3_PRIME(MODIFIER||3||800|LOC_Os02g36210|protein_coding|CODING|LOC_Os02g36210.1|12|1) FN4046-S.SNP.2:21848874 chr02:021848874 0 W/21848874-21848874 FN4046-S SNP T -> A AC=2;AN=168;BQB=0.985366;DP=2552;DP4=1088,1323,9,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.70987e-12;MQSB=0.89936;RPB=0.967465;SGB=15.6372;VDB=0.89541;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.2:21854353 chr02:021854353 0 W/21854353-21854353 FN4241-S SNP T -> C AC=2;AN=170;BQB=0.99002;DP=2371;DP4=1063,1229,19,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.05137e-23;MQSB=0.988017;RPB=0.936753;SGB=150.383;VDB=0.0940598;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R639G|821|LOC_Os02g36220|protein_coding|CODING|LOC_Os02g36220.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R583G|765|LOC_Os02g36220|protein_coding|CODING|LOC_Os02g36220.2|13|1) FN4300-S.SNP.2:21854360 chr02:021854360 0 W/21854360-21854360 FN4300-S SNP T -> G AC=1;AN=170;BQB=0.992823;DP=2406;DP4=1102,1230,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.11868e-08;MQSB=0.998574;RPB=0.980626;SGB=61.2001;VDB=0.282437;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A636|821|LOC_Os02g36220|protein_coding|CODING|LOC_Os02g36220.1|14|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A580|765|LOC_Os02g36220|protein_coding|CODING|LOC_Os02g36220.2|13|1) FN-298.SNP.2:21857249 chr02:021857249 0 W/21857249-21857249 FN-298 Single Base Substitution G-A INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN-336.SNP.2:21863320 chr02:021863320 0 W/21863320-21863320 FN-336 Single Base Substitution A-G INTRON HOMO SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN-288.SNP.2:21868229 chr02:021868229 0 W/21868229-21868229 FN-288 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g36230 transposon protein, putative, unclassified, expressed SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2410.SNP.2:21874133 chr02:021874133 0 W/21874133-21874133 FN2410 SNP A -> G AC=1;AN=200;BQB=0.990843;DP=4457;DP4=2016,2060,6,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000489724;MQSB=5.09041e-08;RPB=0.805867;SGB=29.4849;VDB=0.311874;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.2:21874259 chr02:021874259 0 W/21874259-21874259 FN-329 Single Base Substitution G-A INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3789-S.SNP.2:21874259 chr02:021874259 0 W/21874259-21874259 FN3789-S SNP G -> A AC=2;AN=190;BQB=0.954012;DP=3499;DP4=1740,1591,20,17;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.8795e-12;MQSB=0.725771;RPB=0.376584;SGB=162.942;VDB=0.708927;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.2:21875636 chr02:021875636 0 W/21875636-21875636 FN2223-S SNP T -> C AC=1;AN=190;BQB=0.436277;DP=4758;DP4=2381,1966,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27576e-15;MQSB=0.9298;RPB=0.595188;SGB=51.7524;VDB=0.116955;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.2:21878221 chr02:021878221 0 W/21878221-21878221 FN1467-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1467-S.SNP.2:21878222 chr02:021878222 0 W/21878222-21878222 FN1467-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1467-S.SNP.2:21878224 chr02:021878224 0 W/21878224-21878224 FN1467-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2262-S.SNP.2:21882567 chr02:021882567 0 W/21882567-21882567 FN2262-S SNP A -> T AC=1;AN=190;BQB=0.993028;DP=2237;DP4=1311,707,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000894055;MQB=0.00750499;MQSB=0.00199915;RPB=0.760002;SGB=25.439;VDB=0.543076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.2:21883707 chr02:021883707 0 W/21883707-21883707 FN2500 SNP G -> T AC=1;AN=200;BQB=0.91228;DP=5167;DP4=2362,2505,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.8271e-19;MQSB=0.99891;RPB=0.982227;SGB=132.552;VDB=0.340236;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.2:21884577 chr02:021884577 0 W/21884577-21884577 FN1251-S Single Base Substitution G-A INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3511-S.SNP.2:21886773 chr02:021886773 0 W/21886773-21886773 FN3511-S SNP G -> C AC=2;AN=188;BQB=0.871985;DP=2992;DP4=1339,1568,14,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.8134e-12;MQSB=0.987005;RPB=0.926916;SGB=108.042;VDB=0.152549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Gcg|P733A|821|LOC_Os02g36264|protein_coding|CODING|LOC_Os02g36264.1|14|1) FN984-S.SNP.2:21886921 chr02:021886921 0 W/21886921-21886921 FN984-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g36264 terpene synthase, putative, expressed SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2218-S.SNP.2:21888499 chr02:021888499 0 W/21888499-21888499 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.999862;DP=4810;DP4=2191,2268,11,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69344e-17;MQSB=0.888633;RPB=0.362026;SGB=-42.1241;VDB=0.268506;EFF=INTRON(MODIFIER||||821|LOC_Os02g36264|protein_coding|CODING|LOC_Os02g36264.1|9|1) FN2464.SNP.2:21905945 chr02:021905945 0 W/21905945-21905945 FN2464 SNP G -> A AC=1;AN=200;BQB=0.940421;DP=4099;DP4=1890,1908,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.67925e-07;MQSB=0.610666;RPB=0.669118;SGB=40.4492;VDB=0.672104;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T111|542|LOC_Os02g36280|protein_coding|CODING|LOC_Os02g36280.1|1|1) FN2464.SNP.2:21905946 chr02:021905946 0 W/21905946-21905946 FN2464 SNP G -> A AC=1;AN=200;BQB=0.38134;DP=4099;DP4=1924,1915,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84752e-08;MQSB=0.611767;RPB=0.937768;SGB=1.46408;VDB=0.60361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T111I|542|LOC_Os02g36280|protein_coding|CODING|LOC_Os02g36280.1|1|1) FN3681-S.SNP.2:21906714 chr02:021906714 0 W/21906714-21906714 FN3681-S SNP C -> A AC=2;AN=190;BQB=0.95616;DP=2538;DP4=1177,1235,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.45626e-19;MQSB=0.922724;RPB=0.414161;SGB=100.07;VDB=0.681569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.2:21908884 chr02:021908884 0 W/21908884-21908884 FN1302-S Single Base Substitution G-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN728-S.SNP.2:21908965 chr02:021908965 0 W/21908965-21908965 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN-314.SNP.2:21910163 chr02:021910163 0 W/21910163-21910163 FN-314 Single Base Substitution T-G INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1283-S.SNP.2:21914154 chr02:021914154 0 W/21914154-21914154 FN1283-S Single Base Substitution T-G INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1283-S.SNP.2:21914163 chr02:021914163 0 W/21914163-21914163 FN1283-S Single Base Substitution C-T INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1414-S.SNP.2:21923978 chr02:021923978 0 W/21923978-21923978 FN1414-S Single Base Substitution G-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1414-S.SNP.2:21923979 chr02:021923979 0 W/21923979-21923979 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3991-S.SNP.2:21926529 chr02:021926529 0 W/21926529-21926529 FN3991-S SNP A -> G AC=1;AN=168;BQB=0.987036;DP=2371;DP4=1423,877,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77153e-06;MQSB=0.751326;RPB=0.0429314;SGB=38.8805;VDB=0.012353;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.2:21927057 chr02:021927057 0 W/21927057-21927057 FN-263 Single Base Substitution G-A INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3581-S.SNP.2:21927073 chr02:021927073 0 W/21927073-21927073 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.629218;DP=2823;DP4=1339,1382,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2942e-09;MQSB=0.910239;RPB=0.866534;SGB=76.4186;VDB=0.27561;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.2:21927307 chr02:021927307 0 W/21927307-21927307 FN3524-S SNP C -> T AC=2;AN=188;BQB=0.96599;DP=3012;DP4=1543,1368,21,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.48437e-20;MQSB=0.929686;RPB=0.691893;SGB=171.648;VDB=0.883304;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.2:21927858 chr02:021927858 0 W/21927858-21927858 FN633-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g36330 RING-H2 finger protein ATL1O, putative, expressed SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN633-S.SNP.2:21927999 chr02:021927999 0 W/21927999-21927999 FN633-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g36330 RING-H2 finger protein ATL1O, putative, expressed SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3373-S.SNP.2:21942566 chr02:021942566 0 W/21942566-21942566 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.879024;DP=2814;DP4=1154,1546,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35283e-07;MQSB=0.938506;RPB=0.846804;SGB=42.7914;VDB=0.855535;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.2:21942673 chr02:021942673 0 W/21942673-21942673 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.828943;DP=2820;DP4=1425,1272,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.61244e-08;MQSB=0.999952;RPB=0.809527;SGB=31.4354;VDB=0.0348145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.2:21943161 chr02:021943161 0 W/21943161-21943161 FN3757-S SNP G -> T AC=1;AN=190;BQB=0.241829;DP=2787;DP4=1396,1231,5,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40075e-10;MQSB=0.870287;RPB=0.865395;SGB=14.9883;VDB=0.71136;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.2:21961390 chr02:021961390 0 W/21961390-21961390 FN1348-S Single Base Substitution A-C INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2629-S.SNP.2:21966118 chr02:021966118 0 W/21966118-21966118 FN2629-S SNP T -> A AC=1;AN=200;BQB=0.999976;DP=4366;DP4=1933,2095,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64637e-13;MQSB=0.915644;RPB=0.785707;SGB=76.3213;VDB=0.213712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.2:21966119 chr02:021966119 0 W/21966119-21966119 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.134683;DP=4361;DP4=1923,2195,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39117e-13;MQSB=0.878659;RPB=0.455934;SGB=79.9264;VDB=0.14376;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.2:21975764 chr02:021975764 0 W/21975764-21975764 FN-162 Single Base Substitution A-C INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1521-S.SNP.2:21978201 chr02:021978201 0 W/21978201-21978201 FN1521-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2753-S.SNP.2:21978201 chr02:021978201 0 W/21978201-21978201 FN2753-S SNP G -> A AC=2;AN=200;BQB=0.06228;DP=5112;DP4=2211,2590,12,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.3144e-20;MQSB=0.981328;RPB=0.990926;SGB=43.1985;VDB=0.470909;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|718|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|710|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.2|2|1) FN3287-S.SNP.2:21978201 chr02:021978201 0 W/21978201-21978201 FN3287-S SNP G -> A AC=2;AN=184;BQB=0.993553;DP=3983;DP4=1830,2049,11,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.71728e-21;MQSB=0.948513;RPB=0.798163;SGB=120.271;VDB=0.229463;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|718|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|710|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.2|2|1) FN3581-S.SNP.2:21978201 chr02:021978201 0 W/21978201-21978201 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.915673;DP=3143;DP4=1399,1666,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02465e-05;MQSB=0.999996;RPB=0.738141;SGB=30.8803;VDB=0.755557;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|718|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L218|710|LOC_Os02g36380|protein_coding|CODING|LOC_Os02g36380.2|2|1) FN729-S.SNP.2:21978201 chr02:021978201 0 W/21978201-21978201 FN729-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2160-S.SNP.2:21980392 chr02:021980392 0 W/21980392-21980392 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.0611852;DP=4036;DP4=1911,2074,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00074331;MQB=3.62533e-05;MQSB=0.136629;RPB=0.62565;SGB=9.91396;VDB=0.261798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.2:21997219 chr02:021997219 0 W/21997219-21997219 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.44776;DP=4631;DP4=2313,1848,11,18;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0131721;MQB=1.85522e-07;MQSB=0;RPB=0.964897;SGB=60.4858;VDB=0.162645;EFF=INTRON(MODIFIER||||527|LOC_Os02g36414|protein_coding|CODING|LOC_Os02g36414.1|1|1) FN1326-S.SNP.2:21997903 chr02:021997903 0 W/21997903-21997903 FN1326-S Single Base Substitution T-C INTRON HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2261-S.SNP.2:22000307 chr02:022000307 0 W/22000307-22000307 FN2261-S SNP T -> C AC=1;AN=190;BQB=0.914796;DP=4897;DP4=2360,2252,24,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64202e-23;MQSB=0.976669;RPB=0.998584;SGB=142.717;VDB=0.890484;EFF=INTRON(MODIFIER||||527|LOC_Os02g36414|protein_coding|CODING|LOC_Os02g36414.1|1|1) FN2479.SNP.2:22011481 chr02:022011481 0 W/22011481-22011481 FN2479 SNP C -> T AC=1;AN=200;BQB=0.429016;DP=3885;DP4=1864,1568,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002574;MQB=3.20228e-10;MQSB=0.225175;RPB=0.996979;SGB=83.5316;VDB=0.614017;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V431|554|LOC_Os02g36440|protein_coding|CODING|LOC_Os02g36440.1|3|1) FN2150-S.SNP.2:22011914 chr02:022011914 0 W/22011914-22011914 FN2150-S SNP G -> A AC=1;AN=168;BQB=0.000246943;DP=2755;DP4=1703,1017,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00227631;MQSB=0.776372;RPB=0.765344;SGB=-58.653;VDB=0.474005;EFF=UTR_3_PRIME(MODIFIER||61||554|LOC_Os02g36440|protein_coding|CODING|LOC_Os02g36440.1|3|1) FN3610-S.SNP.2:22013064 chr02:022013064 0 W/22013064-22013064 FN3610-S SNP T -> C AC=1;AN=190;BQB=0.941518;DP=2844;DP4=1286,1463,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.09589e-06;MQSB=0.957523;RPB=0.939028;SGB=35.4339;VDB=0.596362;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.2:22013194 chr02:022013194 0 W/22013194-22013194 FN677-S Single Base Substitution C-T INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN1579-S.SNP.2:22013687 chr02:022013687 0 W/22013687-22013687 FN1579-S Single Base Substitution C-T INTRON HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1373-S.SNP.2:22014209 chr02:022014209 0 W/22014209-22014209 FN1373-S Single Base Substitution C-T INTRON HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2706-S.SNP.2:22022041 chr02:022022041 0 W/22022041-22022041 FN2706-S SNP A -> C AC=1;AN=200;BQB=0.00869723;DP=4819;DP4=2302,2229,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20259e-08;MQSB=0.915802;RPB=0.364785;SGB=77.2904;VDB=0.249373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3573-S.SNP.2:22026129 chr02:022026129 0 W/22026129-22026129 FN3573-S SNP G -> A AC=1;AN=188;BQB=0.967733;DP=2489;DP4=1220,1221,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00200884;MQB=5.14601e-05;MQSB=0.97803;RPB=0.841953;SGB=25.3545;VDB=0.983908;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A17|1756|LOC_Os02g36470|protein_coding|CODING|LOC_Os02g36470.1|1|1) FN876-S.SNP.2:22046068 chr02:022046068 0 W/22046068-22046068 FN876-S Single Base Substitution A-C INTRON HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2702-S.SNP.2:22047628 chr02:022047628 0 W/22047628-22047628 FN2702-S SNP T -> C AC=1;AN=200;BQB=0.033646;DP=5034;DP4=2609,2139,10,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00853082;MQSB=0.712878;RPB=0.932518;SGB=-59.7054;VDB=0.983961;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.2:22060112 chr02:022060112 0 W/22060112-22060112 FN4183-S SNP A -> T AC=1;AN=170;BQB=0.975599;DP=2916;DP4=1421,1425,10,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00439e-11;MQSB=0.973126;RPB=0.969593;SGB=65.8619;VDB=0.0441055;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.2:22060112 chr02:022060112 0 W/22060112-22060112 FN681-S Single Base Substitution A-T INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3864-S.SNP.2:22073402 chr02:022073402 0 W/22073402-22073402 FN3864-S SNP A -> T AC=1;AN=158;BQB=0.45421;DP=2296;DP4=1258,965,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.75008e-05;MQSB=0.95277;RPB=0.451781;SGB=47.0672;VDB=0.479045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.2:22093768 chr02:022093768 0 W/22093768-22093768 FN1376-S Single Base Substitution A-G INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2335.SNP.2:22100347 chr02:022100347 0 W/22100347-22100347 FN2335 SNP G -> C AC=1;AN=192;BQB=0.92181;DP=4045;DP4=2155,1568,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000247219;MQB=2.25442e-13;MQSB=0.187229;RPB=0.118331;SGB=135.933;VDB=0.0979758;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A613|655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A613|655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A613|655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.3|3|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A613|655|LOC_Os02g36595|protein_coding|CODING|LOC_Os02g36595.1|1|1) FN2573-S.SNP.2:22100720 chr02:022100720 0 W/22100720-22100720 FN2573-S SNP G -> C AC=1;AN=198;BQB=0.237781;DP=4016;DP4=1966,1853,4,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.2447e-10;MQSB=0.997168;RPB=0.01274;SGB=7.75428;VDB=0.299215;EFF=UTR_3_PRIME(MODIFIER||244||655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.2|3|1),UTR_3_PRIME(MODIFIER||244||655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.3|3|1),UTR_3_PRIME(MODIFIER||244||655|LOC_Os02g36590|protein_coding|CODING|LOC_Os02g36590.1|2|1) FN3292-S.SNP.2:22101967 chr02:022101967 0 W/22101967-22101967 FN3292-S SNP A -> T AC=1;AN=184;BQB=0.998251;DP=3582;DP4=1706,1784,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.93577e-09;MQSB=0.955818;RPB=0.161;SGB=57.786;VDB=0.80552;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.2:22106024 chr02:022106024 0 W/22106024-22106024 FN1093-S Single Base Substitution T-C INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4183-S.SNP.2:22109086 chr02:022109086 0 W/22109086-22109086 FN4183-S SNP T -> C AC=1;AN=170;BQB=0.998864;DP=2736;DP4=1357,1320,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0102339;MQB=0.00154259;MQSB=0;RPB=0.884531;SGB=27.9928;VDB=0.253803;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.2:22117888 chr02:022117888 0 W/22117888-22117888 FN4065-S SNP G -> A AC=1;AN=168;BQB=0.997371;DP=2697;DP4=1354,1202,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.36835e-08;MQSB=0.999582;RPB=0.556103;SGB=41.6096;VDB=0.562629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.2:22122948 chr02:022122948 0 W/22122948-22122948 FN1460-S Single Base Substitution G-A INTRON Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN_826-4-1.SNP.2:22128034 chr02:022128034 0 W/22128034-22128034 FN_826-4-1 Single Base Substitution C-A Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN3678-S.SNP.2:22136724 chr02:022136724 0 W/22136724-22136724 FN3678-S SNP T -> A AC=1;AN=190;BQB=0.806079;DP=2628;DP4=1416,1106,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73794e-05;MQSB=0.63418;RPB=0.804586;SGB=10.8904;VDB=0.767716;EFF=INTRON(MODIFIER||||113|LOC_Os02g36670|protein_coding|CODING|LOC_Os02g36670.1|1|1) FN3516-S.SNP.2:22137223 chr02:022137223 0 W/22137223-22137223 FN3516-S SNP C -> A AC=1;AN=188;BQB=0.922929;DP=2525;DP4=918,1568,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.29299e-06;MQSB=0.427232;RPB=0.982702;SGB=35.3493;VDB=0.453107;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.2:22139018 chr02:022139018 0 W/22139018-22139018 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3941-S.SNP.2:22149202 chr02:022149202 0 W/22149202-22149202 FN3941-S SNP G -> A AC=2;AN=168;BQB=0.261338;DP=2519;DP4=1274,1107,15,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.90041e-08;MQSB=0.819095;RPB=0.793965;SGB=65.6253;VDB=0.957162;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I134|535|LOC_Os02g36700|protein_coding|CODING|LOC_Os02g36700.1|3|1) FN4300-S.SNP.2:22156795 chr02:022156795 0 W/22156795-22156795 FN4300-S SNP T -> A AC=1;AN=170;BQB=0.987203;DP=2582;DP4=1320,1209,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.45231e-05;MQSB=1;RPB=0.580185;SGB=30.1021;VDB=0.22253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.2:22161025 chr02:022161025 0 W/22161025-22161025 FN2305 SNP A -> T AC=2;AN=192;BQB=0.37503;DP=4779;DP4=2248,2249,22,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.0587e-24;MQSB=0.942918;RPB=0.309754;SGB=143.146;VDB=0.549651;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.2:22163141 chr02:022163141 0 W/22163141-22163141 FN4178-S SNP T -> A AC=2;AN=170;BQB=0.9648;DP=2833;DP4=1348,1366,21,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.80422e-19;MQSB=0.977809;RPB=0.977132;SGB=114.059;VDB=0.316505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.2:22163189 chr02:022163189 0 W/22163189-22163189 FN1516-S Single Base Substitution G-A INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN_543-2-6.SNP.2:22163224 chr02:022163224 0 W/22163224-22163224 FN_543-2-6 Single Base Substitution C-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2753-S.SNP.2:22166422 chr02:022166422 0 W/22166422-22166422 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.96107;DP=4954;DP4=2633,2061,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92836e-11;MQSB=0.936535;RPB=0.622519;SGB=39.9056;VDB=0.164309;EFF=INTRON(MODIFIER||||250|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.1|2|1),INTRON(MODIFIER||||250|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.2|2|1),INTRON(MODIFIER||||250|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.3|1|1),INTRON(MODIFIER||||198|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.4|2|1),INTRON(MODIFIER||||196|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.5|2|1),INTRON(MODIFIER||||183|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.7|2|1),INTRON(MODIFIER||||250|LOC_Os02g36740|protein_coding|CODING|LOC_Os02g36740.8|2|1) FN2470.SNP.2:22169933 chr02:022169933 0 W/22169933-22169933 FN2470 SNP T -> C AC=2;AN=200;BQB=0.985282;DP=3115;DP4=1145,1309,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000321027;MQB=2.01508e-12;MQSB=0.131851;RPB=0.927491;SGB=-200.823;VDB=0.243218;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K74E|271|LOC_Os02g36749|protein_coding|CODING|LOC_Os02g36749.1|1|1) FN1271-S.SNP.2:22182426 chr02:022182426 0 W/22182426-22182426 FN1271-S Single Base Substitution T-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1075-S.SNP.2:22196076 chr02:022196076 0 W/22196076-22196076 FN1075-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g36800 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2304.SNP.2:22196895 chr02:022196895 0 W/22196895-22196895 FN2304 SNP T -> C AC=1;AN=192;BQB=0.85595;DP=4826;DP4=2196,2339,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00165769;MQB=7.98708e-16;MQSB=0.0883319;RPB=0.998116;SGB=103.938;VDB=0.353629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F585L|1355|LOC_Os02g36800|protein_coding|CODING|LOC_Os02g36800.1|6|1) FN3859-S.SNP.2:22208334 chr02:022208334 0 W/22208334-22208334 FN3859-S SNP G -> A AC=1;AN=158;BQB=0.950433;DP=2384;DP4=1232,1050,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000419463;MQB=2.79765e-07;MQSB=0.997647;RPB=0.934786;SGB=42.6978;VDB=0.181116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.2:22209188 chr02:022209188 0 W/22209188-22209188 FN3570-S SNP G -> T AC=1;AN=190;BQB=0.820875;DP=2656;DP4=1278,1270,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13202e-07;MQSB=0.885576;RPB=0.497049;SGB=23.6597;VDB=0.51429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.2:22210373 chr02:022210373 0 W/22210373-22210373 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.84355;DP=4523;DP4=1927,2220,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.67799e-10;MQSB=0.839823;RPB=0.889717;SGB=14.9883;VDB=0.889706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.2:22226097 chr02:022226097 0 W/22226097-22226097 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.970374;DP=2719;DP4=1592,1043,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.80328e-09;MQSB=0.944762;RPB=0.212558;SGB=57.786;VDB=0.0688148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.2:22229745 chr02:022229745 0 W/22229745-22229745 FN1057-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3427-S.SNP.2:22230886 chr02:022230886 0 W/22230886-22230886 FN3427-S SNP G -> T AC=2;AN=184;BQB=0.959819;DP=3557;DP4=1453,2000,17,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.6082e-19;MQSB=0.997632;RPB=0.829285;SGB=76.2326;VDB=0.519481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G363W|493|LOC_Os02g36840|protein_coding|CODING|LOC_Os02g36840.1|2|1) FN4258-S.SNP.2:22231375 chr02:022231375 0 W/22231375-22231375 FN4258-S SNP C -> G AC=1;AN=170;BQB=0.928056;DP=2646;DP4=1499,1081,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.59085e-12;MQSB=0.795343;RPB=0.852763;SGB=36.9825;VDB=0.676971;EFF=UTR_3_PRIME(MODIFIER||94||493|LOC_Os02g36840|protein_coding|CODING|LOC_Os02g36840.1|2|1) FN1048-S.SNP.2:22243344 chr02:022243344 0 W/22243344-22243344 FN1048-S Single Base Substitution C-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN2752-S.SNP.2:22254500 chr02:022254500 0 W/22254500-22254500 FN2752-S SNP C -> G AC=1;AN=200;BQB=0.811687;DP=4846;DP4=2328,2228,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80252e-10;MQSB=0.991959;RPB=0.428412;SGB=77.2904;VDB=0.208773;EFF=INTERGENIC(MODIFIER||||||||||1) FN1190-S.SNP.2:22255594 chr02:022255594 0 W/22255594-22255594 FN1190-S Single Base Substitution A-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2320.SNP.2:22260115 chr02:022260115 0 W/22260115-22260115 FN2320 SNP C -> T AC=2;AN=192;BQB=0.173701;DP=4105;DP4=2045,1695,18,8;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.39923e-13;MQSB=0.999949;RPB=0.0670322;SGB=113.111;VDB=0.435623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A267V|374|LOC_Os02g36880|protein_coding|CODING|LOC_Os02g36880.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A267V|374|LOC_Os02g36880|protein_coding|CODING|LOC_Os02g36880.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A267V|374|LOC_Os02g36880|protein_coding|CODING|LOC_Os02g36880.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A266V|373|LOC_Os02g36880|protein_coding|CODING|LOC_Os02g36880.4|3|1) FN1142-S.SNP.2:22266472 chr02:022266472 0 W/22266472-22266472 FN1142-S Single Base Substitution C-A INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2412.SNP.2:22267407 chr02:022267407 0 W/22267407-22267407 FN2412 SNP A -> T AC=2;AN=200;BQB=0.323217;DP=3982;DP4=1147,2038,11,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.64852e-10;MQSB=0.00158765;RPB=0.581312;SGB=27.1468;VDB=0.614421;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.2:22267927 chr02:022267927 0 W/22267927-22267927 FN706-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g36890 MYB family transcription factor, putative, expressed SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN534-S.SNP.2:22272008 chr02:022272008 0 W/22272008-22272008 FN534-S Single Base Substitution G-A INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3435-S.SNP.2:22286651 chr02:022286651 0 W/22286651-22286651 FN3435-S SNP C -> G AC=1;AN=184;BQB=0.944559;DP=2863;DP4=1448,1347,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.83444e-06;MQSB=0.957935;RPB=0.364301;SGB=35.1773;VDB=0.428039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.2:22289326 chr02:022289326 0 W/22289326-22289326 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.745573;DP=3722;DP4=1499,2174,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.67061e-13;MQSB=0.332915;RPB=0.827621;SGB=61.6823;VDB=0.134287;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.2:22303158 chr02:022303158 0 W/22303158-22303158 FN559-S Single Base Substitution G-C INTERGENIC HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1288-S.SNP.2:22306503 chr02:022306503 0 W/22306503-22306503 FN1288-S Single Base Substitution C-T INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1618-S.SNP.2:22315533 chr02:022315533 0 W/22315533-22315533 FN1618-S Single Base Substitution G-C INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1590-S.SNP.2:22315536 chr02:022315536 0 W/22315536-22315536 FN1590-S Single Base Substitution T-G INTERGENIC Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN1366-S.SNP.2:22327773 chr02:022327773 0 W/22327773-22327773 FN1366-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g36960 choline transporter-related, putative, expressed SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN-86.SNP.2:22349621 chr02:022349621 0 W/22349621-22349621 FN-86 Single Base Substitution A-G INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN473-S.SNP.2:22350186 chr02:022350186 0 W/22350186-22350186 FN473-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g37010 flavin-containing monooxygenase family protein, putative, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3790-S.SNP.2:22354305 chr02:022354305 0 W/22354305-22354305 FN3790-S SNP C -> A AC=1;AN=190;BQB=0.334208;DP=2524;DP4=1170,1264,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18579e-06;MQSB=0.993641;RPB=0.771108;SGB=71.8647;VDB=0.879943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.2:22367166 chr02:022367166 0 W/22367166-22367166 FN3380-S SNP A -> C AC=1;AN=184;BQB=0.685482;DP=2527;DP4=1494,845,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.65173e-10;MQSB=0.444484;RPB=0.73017;SGB=-13.1487;VDB=0.655347;EFF=START_LOST(HIGH|MISSENSE|aTg/aGg|M1R|352|LOC_Os02g37030|protein_coding|CODING|LOC_Os02g37030.1|1|1);LOF=(LOC_Os02g37030|LOC_Os02g37030|1|1.00) FN2674-S.SNP.2:22370236 chr02:022370236 0 W/22370236-22370236 FN2674-S SNP C -> A AC=1;AN=200;BQB=0.971316;DP=4753;DP4=2527,2034,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0096e-08;MQSB=0.0941661;RPB=0.946122;SGB=54.6902;VDB=0.323427;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.2:22373778 chr02:022373778 0 W/22373778-22373778 FN973-S Single Base Substitution G-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3731-S.SNP.2:22406046 chr02:022406046 0 W/22406046-22406046 FN3731-S SNP G -> T AC=2;AN=190;BQB=0.985477;DP=2775;DP4=1485,1187,7,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47593e-12;MQSB=0.990225;RPB=0.983883;SGB=94.6341;VDB=0.892585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.2:22411001 chr02:022411001 0 W/22411001-22411001 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.143236;DP=4065;DP4=1791,2228,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.69935e-08;MQSB=0.999136;RPB=0.258881;SGB=-115.779;VDB=0.145972;EFF=INTRON(MODIFIER||||309|LOC_Os02g37080|protein_coding|CODING|LOC_Os02g37080.1|1|1),INTRON(MODIFIER||||243|LOC_Os02g37080|protein_coding|CODING|LOC_Os02g37080.2|1|1) FN-148.SNP.2:22411208 chr02:022411208 0 W/22411208-22411208 FN-148 Single Base Substitution A-G INTRON HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN796-S.SNP.2:22415819 chr02:022415819 0 W/22415819-22415819 FN796-S Single Base Substitution G-A INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN1326-S.SNP.2:22430237 chr02:022430237 0 W/22430237-22430237 FN1326-S Single Base Substitution C-G INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN-403.SNP.2:22430239 chr02:022430239 0 W/22430239-22430239 FN-403 Single Base Substitution A-G INTERGENIC HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.2:22430239 chr02:022430239 0 W/22430239-22430239 FN403-S Single Base Substitution A-G INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN433-S.SNP.2:22445050 chr02:022445050 0 W/22445050-22445050 FN433-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN-263.SNP.2:22446411 chr02:022446411 0 W/22446411-22446411 FN-263 Single Base Substitution A-T INTRON HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN-353.SNP.2:22450016 chr02:022450016 0 W/22450016-22450016 FN-353 Single Base Substitution C-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-353.SNP.2:22450019 chr02:022450019 0 W/22450019-22450019 FN-353 Single Base Substitution A-T INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-353.SNP.2:22450905 chr02:022450905 0 W/22450905-22450905 FN-353 Single Base Substitution G-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-353.SNP.2:22450907 chr02:022450907 0 W/22450907-22450907 FN-353 Single Base Substitution G-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3506-S.SNP.2:22456100 chr02:022456100 0 W/22456100-22456100 FN3506-S SNP A -> G AC=1;AN=188;BQB=0.900926;DP=2626;DP4=1209,1353,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.55077e-05;MQSB=0.927635;RPB=0.183163;SGB=21.8113;VDB=0.00817939;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I506|845|LOC_Os02g37140|protein_coding|CODING|LOC_Os02g37140.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I506|845|LOC_Os02g37140|protein_coding|CODING|LOC_Os02g37140.2|1|1) FN3790-S.SNP.2:22463935 chr02:022463935 0 W/22463935-22463935 FN3790-S SNP T -> A AC=1;AN=190;BQB=0.981284;DP=2862;DP4=1324,1460,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0115304;MQB=0.162064;MQSB=0.994847;RPB=0.952434;SGB=39.9877;VDB=0.118721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.2:22466400 chr02:022466400 0 W/22466400-22466400 FN2185-S SNP C -> A AC=1;AN=190;BQB=0.360727;DP=3694;DP4=1813,1601,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.70523e-07;MQSB=0.728703;RPB=0.584049;SGB=67.3108;VDB=0.170157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.2:22473061 chr02:022473061 0 W/22473061-22473061 FN1755-S SNP T -> C AC=1;AN=188;BQB=0.854605;DP=2535;DP4=1814,677,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.50482e-08;MQSB=0.999748;RPB=0.65799;SGB=7.0815;VDB=0.365391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.2:22486373 chr02:022486373 0 W/22486373-22486373 FN2335 SNP A -> T AC=1;AN=192;BQB=0.810454;DP=3917;DP4=1539,1707,22,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000255297;MQB=1.20074e-18;MQSB=0.116795;RPB=0.723977;SGB=-0.659969;VDB=0.200651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T73S|76|LOC_Os02g37210|protein_coding|CODING|LOC_Os02g37210.1|1|1) FN1195-S.SNP.2:22496060 chr02:022496060 0 W/22496060-22496060 FN1195-S Single Base Substitution C-T STOP_GAINED HET LOC_Os02g37230 expressed protein SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN-112.SNP.2:22498078 chr02:022498078 0 W/22498078-22498078 FN-112 Single Base Substitution T-A INTRON HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2351.SNP.2:22498209 chr02:022498209 0 W/22498209-22498209 FN2351 SNP A -> T AC=1;AN=192;BQB=0.605025;DP=5496;DP4=2161,2944,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00818777;MQB=0.00119355;MQSB=4.00179e-27;RPB=0.92488;SGB=31.4783;VDB=0.905503;EFF=INTRON(MODIFIER||||668|LOC_Os02g37230|protein_coding|CODING|LOC_Os02g37230.1|9|1) FN1557-S.SNP.2:22498796 chr02:022498796 0 W/22498796-22498796 FN1557-S Single Base Substitution T-A INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3976-S.SNP.2:22502867 chr02:022502867 0 W/22502867-22502867 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.317036;DP=1939;DP4=1219,640,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0118442;MQSB=1.57541e-08;RPB=0.564339;SGB=27.8864;VDB=0.93653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.2:22513331 chr02:022513331 0 W/22513331-22513331 FN2313 SNP T -> G AC=1;AN=192;BQB=0.90759;DP=5134;DP4=2459,2385,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.21061e-05;MQSB=0.938197;RPB=0.394988;SGB=10.9636;VDB=0.838097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.2:22513503 chr02:022513503 0 W/22513503-22513503 FN2358 SNP T -> A AC=1;AN=192;BQB=0.831656;DP=4706;DP4=2021,2390,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.28119e-13;MQSB=0.921141;RPB=0.999954;SGB=71.8591;VDB=0.882672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.2:22514032 chr02:022514032 0 W/22514032-22514032 FN1230-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1097-S.SNP.2:22514548 chr02:022514548 0 W/22514548-22514548 FN1097-S Single Base Substitution C-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2774-S.SNP.2:22518269 chr02:022518269 0 W/22518269-22518269 FN2774-S SNP C -> A AC=1;AN=198;BQB=0.937635;DP=4809;DP4=2188,2361,17,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.68148e-22;MQSB=0.999616;RPB=0.851361;SGB=126.432;VDB=0.690108;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.2:22518356 chr02:022518356 0 W/22518356-22518356 FN890-S Single Base Substitution G-C INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1431-S.SNP.2:22522475 chr02:022522475 0 W/22522475-22522475 FN1431-S Single Base Substitution A-G INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1261-S.SNP.2:22530841 chr02:022530841 0 W/22530841-22530841 FN1261-S Single Base Substitution A-T INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2563-S.SNP.2:22535913 chr02:022535913 0 W/22535913-22535913 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.999702;DP=3946;DP4=1898,1796,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000253421;MQB=0.000384936;MQSB=0.029698;RPB=0.996088;SGB=11.1786;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.2:22544990 chr02:022544990 0 W/22544990-22544990 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.895679;DP=2619;DP4=1255,1287,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35686e-05;MQSB=0.953932;RPB=0.970765;SGB=30.6558;VDB=0.812989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.2:22546222 chr02:022546222 0 W/22546222-22546222 FN1061-S Single Base Substitution C-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2711-S.SNP.2:22546298 chr02:022546298 0 W/22546298-22546298 FN2711-S SNP G -> A AC=2;AN=200;BQB=0.357355;DP=5074;DP4=2007,2825,19,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.34815e-27;MQSB=0.999339;RPB=0.747448;SGB=215.445;VDB=0.784155;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.2:22554833 chr02:022554833 0 W/22554833-22554833 FN-365 Single Base Substitution G-A INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN2701-S.SNP.2:22557277 chr02:022557277 0 W/22557277-22557277 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.672958;DP=4592;DP4=2043,2297,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83853e-10;MQSB=0.993743;RPB=0.936826;SGB=47.4799;VDB=0.0831968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D154N|262|LOC_Os02g37309|protein_coding|CODING|LOC_Os02g37309.1|1|1) FN-99.SNP.2:22560760 chr02:022560760 0 W/22560760-22560760 FN-99 Single Base Substitution T-C INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2480.SNP.2:22566977 chr02:022566977 0 W/22566977-22566977 FN2480 SNP C -> T AC=1;AN=200;BQB=0.768755;DP=4152;DP4=1852,1998,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45967e-09;MQSB=0.596356;RPB=0.903721;SGB=34.6953;VDB=0.793419;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.2:22568809 chr02:022568809 0 W/22568809-22568809 FN626-S Single Base Substitution T-A INTERGENIC HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1216-S.SNP.2:22575291 chr02:022575291 0 W/22575291-22575291 FN1216-S Single Base Substitution G-T INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1382-S.SNP.2:22575321 chr02:022575321 0 W/22575321-22575321 FN1382-S Single Base Substitution C-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2634-S.SNP.2:22577222 chr02:022577222 0 W/22577222-22577222 FN2634-S SNP T -> C AC=1;AN=200;BQB=0.598737;DP=5033;DP4=2298,2560,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.08541e-16;MQSB=0.998313;RPB=0.905539;SGB=109.527;VDB=0.420694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.2:22578662 chr02:022578662 0 W/22578662-22578662 FN1687-S SNP T -> A AC=1;AN=188;BQB=0.00734117;DP=2094;DP4=909,1119,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000183895;MQSB=0.950248;RPB=0.997302;SGB=-83.9838;VDB=0.222035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.2:22578663 chr02:022578663 0 W/22578663-22578663 FN1687-S SNP C -> A AC=1;AN=188;BQB=0.0219558;DP=2080;DP4=911,1115,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.67981e-07;MQSB=0.934199;RPB=0.998141;SGB=20.9896;VDB=0.113622;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.2:22579738 chr02:022579738 0 W/22579738-22579738 FN_789-2-1 Single Base Substitution C-T HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2268-S.SNP.2:22588121 chr02:022588121 0 W/22588121-22588121 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.681623;DP=4884;DP4=2273,2199,22,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.25093e-19;MQSB=0.999644;RPB=0.983455;SGB=50.7274;VDB=0.274955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.2:22592391 chr02:022592391 0 W/22592391-22592391 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.999943;DP=3227;DP4=1470,1689,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58012e-10;MQSB=0.82471;RPB=0.0624463;SGB=53.3568;VDB=0.195169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.2:22593290 chr02:022593290 0 W/22593290-22593290 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1412-S.SNP.2:22596542 chr02:022596542 0 W/22596542-22596542 FN1412-S Single Base Substitution G-A INTRON HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3549-S.SNP.2:22604125 chr02:022604125 0 W/22604125-22604125 FN3549-S SNP G -> T AC=2;AN=188;BQB=0.74187;DP=2689;DP4=1360,1272,8,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6824e-11;MQSB=0.886432;RPB=0.277725;SGB=76.2387;VDB=0.925154;EFF=INTRON(MODIFIER||||114|LOC_Os02g37430|protein_coding|CODING|LOC_Os02g37430.1|2|1) FN1264-S.SNP.2:22604160 chr02:022604160 0 W/22604160-22604160 FN1264-S Single Base Substitution C-T INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3373-S.SNP.2:22615005 chr02:022615005 0 W/22615005-22615005 FN3373-S SNP A -> G AC=1;AN=184;BQB=0.99553;DP=3397;DP4=1698,1583,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000883132;MQB=8.65392e-09;MQSB=7.7437e-05;RPB=0.873251;SGB=80.3949;VDB=0.817713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T222A|487|LOC_Os02g37460|protein_coding|CODING|LOC_Os02g37460.1|2|1) FN2668-S.SNP.2:22625218 chr02:022625218 0 W/22625218-22625218 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.952673;DP=4989;DP4=2326,2387,13,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80195e-21;MQSB=0.884435;RPB=0.855838;SGB=112.373;VDB=0.998982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.2:22627144 chr02:022627144 0 W/22627144-22627144 FN1180-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN-111.SNP.2:22628919 chr02:022628919 0 W/22628919-22628919 FN-111 Single Base Substitution G-T INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1116-S.SNP.2:22631289 chr02:022631289 0 W/22631289-22631289 FN1116-S Single Base Substitution C-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3341-S.SNP.2:22632498 chr02:022632498 0 W/22632498-22632498 FN3341-S SNP T -> A AC=2;AN=184;BQB=0.488336;DP=3734;DP4=1870,1493,16,6;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.00749866;MQB=0.00679488;MQSB=0.133711;RPB=0.911969;SGB=-38.6214;VDB=0.275751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.2:22632544 chr02:022632544 0 W/22632544-22632544 FN2171-S SNP C -> A AC=1;AN=168;BQB=0.129896;DP=3376;DP4=2308,1029,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00947867;MQB=0.128995;MQSB=1.97323e-12;RPB=0.601639;SGB=-108.641;VDB=0.255873;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.2:22634986 chr02:022634986 0 W/22634986-22634986 FN-298 Single Base Substitution T-A INTERGENIC HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. W276-2-1.SNP.2:22638235 chr02:022638235 0 W/22638235-22638235 W276-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1696-S.SNP.2:22645524 chr02:022645524 0 W/22645524-22645524 FN1696-S SNP G -> A AC=1;AN=188;BQB=0.357311;DP=1740;DP4=1013,666,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.96311e-06;MQSB=0.972757;RPB=0.725286;SGB=28.8977;VDB=0.261569;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W134*|156|LOC_Os02g37520|protein_coding|CODING|LOC_Os02g37520.1|2|1) FN1696-S.SNP.2:22645525 chr02:022645525 0 W/22645525-22645525 FN1696-S SNP A -> T AC=1;AN=188;BQB=0.611276;DP=1740;DP4=1009,665,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.40016e-06;MQSB=0.995374;RPB=0.640128;SGB=-16.0863;VDB=0.543455;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N135Y|156|LOC_Os02g37520|protein_coding|CODING|LOC_Os02g37520.1|2|1) FN1699-S.SNP.2:22656911 chr02:022656911 0 W/22656911-22656911 FN1699-S SNP G -> A AC=1;AN=188;BQB=0.0268159;DP=2910;DP4=1288,1595,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00309278;MQB=0.0345153;MQSB=1.37662e-06;RPB=0.198341;SGB=-33.7109;VDB=0.648768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.2:22657181 chr02:022657181 0 W/22657181-22657181 FN2392 SNP A -> G AC=1;AN=200;BQB=0.37143;DP=4442;DP4=1851,2169,14,14;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00495272;MQB=0.0544856;MQSB=1.26272e-09;RPB=0.279369;SGB=90.7419;VDB=0.874252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.2:22661459 chr02:022661459 0 W/22661459-22661459 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.0507339;DP=3383;DP4=1315,1680,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.14275e-08;MQSB=0.0808357;RPB=0.890449;SGB=15.7299;VDB=0.324462;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.2:22661945 chr02:022661945 0 W/22661945-22661945 FN-329 Single Base Substitution C-A INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3374-S.SNP.2:22663690 chr02:022663690 0 W/22663690-22663690 FN3374-S SNP G -> A AC=2;AN=184;BQB=0.736802;DP=2939;DP4=1175,1628,17,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.42037e-19;MQSB=0.823249;RPB=0.99329;SGB=188.918;VDB=0.678679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.2:22671834 chr02:022671834 0 W/22671834-22671834 FN1537-S Single Base Substitution C-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN-338.SNP.2:22672681 chr02:022672681 0 W/22672681-22672681 FN-338 Single Base Substitution T-A INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN3401-S.SNP.2:22673216 chr02:022673216 0 W/22673216-22673216 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.912966;DP=2640;DP4=1122,1430,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.97952e-06;MQSB=0.982132;RPB=0.72629;SGB=35.1773;VDB=0.431879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2257-S.SNP.2:22676583 chr02:022676583 0 W/22676583-22676583 FN2257-S SNP G -> A AC=2;AN=190;BQB=0.931137;DP=4991;DP4=2352,2270,26,29;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.144861;MQB=0.345065;MQSB=0.913711;RPB=0.599547;SGB=-171.928;VDB=0.556652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.2:22677823 chr02:022677823 0 W/22677823-22677823 FN3293-S SNP G -> A AC=1;AN=184;BQB=0.271414;DP=3094;DP4=1390,1581,12,16;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.67651e-08;MQSB=0.243437;RPB=0.237652;SGB=23.542;VDB=0.065783;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.2:22679335 chr02:022679335 0 W/22679335-22679335 FN487-S Single Base Substitution G-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2177-S.SNP.2:22682705 chr02:022682705 0 W/22682705-22682705 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.0396682;DP=2885;DP4=1061,1777,8,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.93582e-09;MQSB=0.911787;RPB=0.827742;SGB=-354.303;VDB=0.505341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.2:22684273 chr02:022684273 0 W/22684273-22684273 FN3421-S SNP C -> G AC=1;AN=184;BQB=0.95753;DP=2245;DP4=1334,858,9,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.64838e-07;MQSB=0.997887;RPB=0.264312;SGB=25.1826;VDB=0.0380091;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.2:22684523 chr02:022684523 0 W/22684523-22684523 FN728-S Single Base Substitution G-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN3979-S.SNP.2:22685396 chr02:022685396 0 W/22685396-22685396 FN3979-S SNP G -> C AC=1;AN=168;BQB=0.991814;DP=3023;DP4=1493,1439,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.36816e-11;MQSB=0.61694;RPB=0.997614;SGB=65.6253;VDB=0.0983232;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.2:22685756 chr02:022685756 0 W/22685756-22685756 FN2668-S SNP A -> T AC=1;AN=200;BQB=0.994878;DP=5170;DP4=2342,2100,11,10;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=7.36118e-13;MQSB=1.94108e-16;RPB=0.288207;SGB=39.9056;VDB=0.202645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.2:22686389 chr02:022686389 0 W/22686389-22686389 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.72199;DP=3542;DP4=1620,1888,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.07772e-08;MQSB=0.940224;RPB=0.990489;SGB=-38.3665;VDB=0.778443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.2:22691733 chr02:022691733 0 W/22691733-22691733 FN2452 SNP C -> T AC=1;AN=200;BQB=0.381335;DP=4426;DP4=2363,1894,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.94503e-06;MQSB=0.944349;RPB=0.806791;SGB=29.4541;VDB=0.317696;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L674|749|LOC_Os02g37590|protein_coding|CODING|LOC_Os02g37590.1|9|1) FN_776-5-1.SNP.2:22695261 chr02:022695261 0 W/22695261-22695261 FN_776-5-1 Single Base Substitution G-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2497.SNP.2:22707079 chr02:022707079 0 W/22707079-22707079 FN2497 SNP G -> A AC=2;AN=200;BQB=0.358184;DP=3662;DP4=1140,2161,6,12;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.000819224;MQB=0.00170582;MQSB=0.860497;RPB=0.780763;SGB=32.0901;VDB=0.322143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.2:22708085 chr02:022708085 0 W/22708085-22708085 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.875081;DP=1463;DP4=982,402,11,0;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00478469;MQB=0.00061967;MQSB=0.764916;RPB=0.96524;SGB=44.5415;VDB=0.763155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.2:22712967 chr02:022712967 0 W/22712967-22712967 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.501231;DP=2360;DP4=1319,922,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000489618;MQSB=0.371261;RPB=0.999571;SGB=28.7043;VDB=0.342372;EFF=INTRON(MODIFIER||||968|LOC_Os02g37630|protein_coding|CODING|LOC_Os02g37630.1|1|1) FN860-S.SNP.2:22714055 chr02:022714055 0 W/22714055-22714055 FN860-S Single Base Substitution C-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN3765-S.SNP.2:22717382 chr02:022717382 0 W/22717382-22717382 FN3765-S SNP C -> T AC=1;AN=190;BQB=0.824271;DP=2666;DP4=1330,1243,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61899e-07;MQSB=0.99983;RPB=0.762212;SGB=62.7569;VDB=0.38995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.2:22718639 chr02:022718639 0 W/22718639-22718639 FN1284-S Single Base Substitution G-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3507-S.SNP.2:22733666 chr02:022733666 0 W/22733666-22733666 FN3507-S SNP G -> A AC=2;AN=188;BQB=0.915227;DP=2970;DP4=1368,1470,15,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.3922e-17;MQSB=0.974057;RPB=0.386007;SGB=89.1337;VDB=0.0213962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.2:22735465 chr02:022735465 0 W/22735465-22735465 FN2328 SNP A -> G AC=2;AN=192;BQB=0.355826;DP=5117;DP4=2511,2346,43,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.87378e-40;MQSB=0.995758;RPB=0.318735;SGB=180.21;VDB=0.961805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.2:22736551 chr02:022736551 0 W/22736551-22736551 FN3606-S SNP G -> A AC=1;AN=190;BQB=0.968311;DP=2780;DP4=1398,1288,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12439e-05;MQSB=0.97063;RPB=0.169564;SGB=18.3316;VDB=0.116387;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.2:22739431 chr02:022739431 0 W/22739431-22739431 FN-158 Single Base Substitution G-A INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN3985-S.SNP.2:22740559 chr02:022740559 0 W/22740559-22740559 FN3985-S SNP G -> T AC=1;AN=168;BQB=0.970127;DP=2803;DP4=1373,1232,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.72145e-08;MQSB=0.998256;RPB=0.854955;SGB=22.1847;VDB=0.170297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.2:22742246 chr02:022742246 0 W/22742246-22742246 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.679954;DP=4575;DP4=2277,2081,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.7861e-13;MQSB=0.998287;RPB=0.931568;SGB=61.9006;VDB=0.40232;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L335|431|LOC_Os02g37690|protein_coding|CODING|LOC_Os02g37690.1|1|1) FN3594-S.SNP.2:22749693 chr02:022749693 0 W/22749693-22749693 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.769263;DP=2497;DP4=1100,1331,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03835e-07;MQSB=0.874916;RPB=0.974957;SGB=35.9843;VDB=0.856873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.2:22753325 chr02:022753325 0 W/22753325-22753325 FN2117-S SNP A -> G AC=1;AN=168;BQB=0.999988;DP=3531;DP4=1660,1802,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.29231e-11;MQSB=0.806275;RPB=0.852847;SGB=55.3328;VDB=0.200672;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.2:22758608 chr02:022758608 0 W/22758608-22758608 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1015-S.SNP.2:22765382 chr02:022765382 0 W/22765382-22765382 FN1015-S Single Base Substitution A-G INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN925-S.SNP.2:22766211 chr02:022766211 0 W/22766211-22766211 FN925-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g37710 lecithine cholesterol acyltransferase, putative, expressed SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN4302-S.SNP.2:22769775 chr02:022769775 0 W/22769775-22769775 FN4302-S SNP T -> A AC=2;AN=170;BQB=0.984846;DP=2340;DP4=1210,1037,23,6;HOB=0.0232526;ICB=0.494188;MQ=25;MQ0F=0.0581197;MQB=0.030848;MQSB=0.000180146;RPB=0.757855;SGB=89.9604;VDB=0.75655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S848T|1050|LOC_Os02g37720|protein_coding|CODING|LOC_Os02g37720.1|1|1) FN949-S.SNP.2:22778610 chr02:022778610 0 W/22778610-22778610 FN949-S Single Base Substitution A-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2785-S.SNP.2:22780769 chr02:022780769 0 W/22780769-22780769 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.239228;DP=3920;DP4=2001,1701,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.2083e-08;MQSB=0.921381;RPB=0.999956;SGB=10.9445;VDB=0.726785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.2:22786437 chr02:022786437 0 W/22786437-22786437 FN2375 SNP T -> A AC=1;AN=192;BQB=0.588997;DP=4861;DP4=2390,1990,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205719;MQB=2.60025e-10;MQSB=0.616939;RPB=0.532404;SGB=7.3548;VDB=0.280677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.2:22790803 chr02:022790803 0 W/22790803-22790803 FN3774-S SNP T -> G AC=2;AN=190;BQB=0.609462;DP=2582;DP4=1264,1154,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78736e-12;MQSB=0.674246;RPB=0.667099;SGB=85.5263;VDB=0.229504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K47T|284|LOC_Os02g37770|protein_coding|CODING|LOC_Os02g37770.1|1|1) FN-107.SNP.2:22798642 chr02:022798642 0 W/22798642-22798642 FN-107 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g37790 retrotransposon protein, putative, unclassified, expressed SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1625-S.SNP.2:22804361 chr02:022804361 0 W/22804361-22804361 FN1625-S Single Base Substitution C-A INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.2:22804361 chr02:022804361 0 W/22804361-22804361 FN1626-S SNP C -> A AC=1;AN=188;BQB=0.073004;DP=3046;DP4=1826,1195,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.27272e-07;MQSB=0.942359;RPB=0.93841;SGB=-15.5431;VDB=0.558862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.2:22804913 chr02:022804913 0 W/22804913-22804913 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.38455;DP=2170;DP4=1025,1045,11,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.17199e-19;MQSB=0.973678;RPB=0.94551;SGB=87.9846;VDB=0.493351;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.2:22804914 chr02:022804914 0 W/22804914-22804914 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.986721;DP=2183;DP4=1016,1065,12,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.07885e-20;MQSB=0.983806;RPB=0.625329;SGB=91.3541;VDB=0.289232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.2:22804920 chr02:022804920 0 W/22804920-22804920 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.674129;DP=2190;DP4=1031,1063,12,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.07307e-20;MQSB=0.977003;RPB=0.235812;SGB=125.717;VDB=0.164627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.2:22804921 chr02:022804921 0 W/22804921-22804921 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.179575;DP=2194;DP4=1025,1061,13,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.37647e-21;MQSB=0.995458;RPB=0.420366;SGB=98.093;VDB=0.277681;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.2:22807021 chr02:022807021 0 W/22807021-22807021 FN4030-S SNP T -> C AC=2;AN=168;BQB=0.715788;DP=2358;DP4=1205,1026,12,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000424088;MQB=6.08389e-10;MQSB=0.764148;RPB=0.747398;SGB=65.6253;VDB=0.184471;EFF=INTRON(MODIFIER||||440|LOC_Os02g37800|protein_coding|CODING|LOC_Os02g37800.1|1|1) FN2637-S.SNP.2:22810607 chr02:022810607 0 W/22810607-22810607 FN2637-S SNP G -> A AC=2;AN=200;BQB=0.714289;DP=4747;DP4=2608,1803,29,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.28381e-26;MQSB=0.683116;RPB=0.99564;SGB=210.84;VDB=0.0825688;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.2:22811761 chr02:022811761 0 W/22811761-22811761 FN666-S Single Base Substitution C-T INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN351-S.SNP.2:22813614 chr02:022813614 0 W/22813614-22813614 FN351-S Single Base Substitution G-A INTRON HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2634-S.SNP.2:22816256 chr02:022816256 0 W/22816256-22816256 FN2634-S SNP G -> A AC=1;AN=200;BQB=0.630901;DP=4945;DP4=2273,2287,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75098e-15;MQSB=0.990148;RPB=0.735339;SGB=-38.0794;VDB=0.807005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.2:22818377 chr02:022818377 0 W/22818377-22818377 FN-184 Single Base Substitution C-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3723-S.SNP.2:22819290 chr02:022819290 0 W/22819290-22819290 FN3723-S SNP T -> A AC=1;AN=190;BQB=0.985674;DP=2984;DP4=1390,1429,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54778e-05;MQSB=0.996491;RPB=0.93805;SGB=49.0954;VDB=0.11483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.2:22820493 chr02:022820493 0 W/22820493-22820493 FN3773-S SNP A -> G AC=2;AN=190;BQB=0.987976;DP=3024;DP4=1516,1346,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.82876e-15;MQSB=0.995751;RPB=0.993452;SGB=54.3062;VDB=0.623926;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.2:22835448 chr02:022835448 0 W/22835448-22835448 FN4176-S SNP T -> G AC=1;AN=170;BQB=0.949356;DP=2412;DP4=1059,1229,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.20759e-06;MQSB=0.97183;RPB=0.911559;SGB=38.987;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.2:22835843 chr02:022835843 0 W/22835843-22835843 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.563418;DP=2468;DP4=1131,1272,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22103e-06;MQSB=0.975826;RPB=0.967527;SGB=57.786;VDB=0.525752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V11M|172|LOC_Os02g37834|protein_coding|CODING|LOC_Os02g37834.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V11M|172|LOC_Os02g37834|protein_coding|CODING|LOC_Os02g37834.2|1|1),START_GAINED(LOW||||61|LOC_Os02g37834|protein_coding|CODING|LOC_Os02g37834.4|1|1),UTR_5_PRIME(MODIFIER||1885||61|LOC_Os02g37834|protein_coding|CODING|LOC_Os02g37834.4|1|1) FN2330.SNP.2:22839322 chr02:022839322 0 W/22839322-22839322 FN2330 SNP C -> T AC=1;AN=192;BQB=0.857041;DP=5540;DP4=2462,2636,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17203e-11;MQSB=0.855712;RPB=0.920021;SGB=18.3052;VDB=0.591155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.2:22839521 chr02:022839521 0 W/22839521-22839521 FN2372 SNP A -> G AC=1;AN=192;BQB=0.2236;DP=5405;DP4=2630,2375,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.5707e-16;MQSB=0.959637;RPB=0.986557;SGB=96.8096;VDB=0.332485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3888-S.SNP.2:22854522 chr02:022854522 0 W/22854522-22854522 FN3888-S SNP G -> A AC=1;AN=158;BQB=0.913451;DP=1237;DP4=298,876,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.06881e-06;MQSB=0.0016455;RPB=0.647172;SGB=19.0798;VDB=0.17229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.2:22861612 chr02:022861612 0 W/22861612-22861612 FN2674-S SNP G -> T AC=2;AN=200;BQB=0.667654;DP=4740;DP4=2298,2177,23,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.58189e-24;MQSB=0.876659;RPB=0.333159;SGB=137.609;VDB=0.129229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.2:22867403 chr02:022867403 0 W/22867403-22867403 FN1089-S Single Base Substitution T-C INTRON HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2577-S.SNP.2:22877775 chr02:022877775 0 W/22877775-22877775 FN2577-S SNP A -> C AC=1;AN=198;BQB=0.956988;DP=4134;DP4=2065,1826,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000654921;MQSB=0.894364;RPB=0.917347;SGB=8.58354;VDB=0.180184;EFF=INTRON(MODIFIER||||475|LOC_Os02g37856|protein_coding|CODING|LOC_Os02g37856.1|6|1) W279-4-1.SNP.2:22877805 chr02:022877805 0 W/22877805-22877805 W279-4-1 Single Base Substitution A-G INTRON HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN-227.SNP.2:22881630 chr02:022881630 0 W/22881630-22881630 FN-227 Single Base Substitution G-C INTERGENIC HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. W385-6-8-4.SNP.2:22891942 chr02:022891942 0 W/22891942-22891942 W385-6-8-4 Single Base Substitution G-A INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1048-S.SNP.2:22899544 chr02:022899544 0 W/22899544-22899544 FN1048-S Single Base Substitution A-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1349-S.SNP.2:22912790 chr02:022912790 0 W/22912790-22912790 FN1349-S Single Base Substitution C-T INTRON HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN461-S.SNP.2:22919879 chr02:022919879 0 W/22919879-22919879 FN461-S Single Base Substitution T-A INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN4302-S.SNP.2:22922408 chr02:022922408 0 W/22922408-22922408 FN4302-S SNP G -> A AC=2;AN=170;BQB=0.99628;DP=2794;DP4=1404,1308,12,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.64426e-12;MQSB=0.98018;RPB=0.999795;SGB=87.856;VDB=0.031194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R574C|923|LOC_Os02g37920|protein_coding|CODING|LOC_Os02g37920.1|3|1) FN3854-S.SNP.2:22926596 chr02:022926596 0 W/22926596-22926596 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.944772;DP=2279;DP4=1070,1123,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.48337e-05;MQSB=0.944221;RPB=0.983014;SGB=38.3284;VDB=0.224432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.2:22928135 chr02:022928135 0 W/22928135-22928135 FN2292 SNP C -> T AC=1;AN=192;BQB=0.763413;DP=4738;DP4=2392,2069,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.20633e-12;MQSB=0.97568;RPB=0.995873;SGB=21.4339;VDB=0.312978;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I39|107|LOC_Os02g37930|protein_coding|CODING|LOC_Os02g37930.1|2|1) FN2447.SNP.2:22934718 chr02:022934718 0 W/22934718-22934718 FN2447 SNP C -> T AC=1;AN=200;BQB=0.827748;DP=4712;DP4=2149,2259,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65307e-11;MQSB=0.991689;RPB=0.512814;SGB=12.7003;VDB=0.874527;EFF=UTR_5_PRIME(MODIFIER||839||766|LOC_Os02g37950|protein_coding|CODING|LOC_Os02g37950.1|1|1),UTR_5_PRIME(MODIFIER||839||766|LOC_Os02g37950|protein_coding|CODING|LOC_Os02g37950.3|1|1),INTRON(MODIFIER||||766|LOC_Os02g37950|protein_coding|CODING|LOC_Os02g37950.2|1|1) FN3393-S.SNP.2:22942300 chr02:022942300 0 W/22942300-22942300 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.404716;DP=3093;DP4=1696,1262,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33109e-10;MQSB=0.857095;RPB=0.995283;SGB=67.4439;VDB=0.0862686;EFF=UTR_3_PRIME(MODIFIER||134||208|LOC_Os02g37960|protein_coding|CODING|LOC_Os02g37960.1|1|1) FN4093-S.SNP.2:22943109 chr02:022943109 0 W/22943109-22943109 FN4093-S SNP C -> T AC=2;AN=182;BQB=0.805705;DP=1327;DP4=561,683,4,5;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=0.00293814;MQSB=0.861919;RPB=0.98445;SGB=35.0899;VDB=0.54263;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A112|126|LOC_Os02g37970|protein_coding|CODING|LOC_Os02g37970.1|2|1),UTR_3_PRIME(MODIFIER||943||208|LOC_Os02g37960|protein_coding|CODING|LOC_Os02g37960.1|1|1) FN3448-S.SNP.2:22945869 chr02:022945869 0 W/22945869-22945869 FN3448-S SNP T -> C AC=1;AN=184;BQB=0.97672;DP=3046;DP4=1550,1397,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0553e-06;MQSB=0.996178;RPB=0.905115;SGB=39.699;VDB=0.0766355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.2:22955336 chr02:022955336 0 W/22955336-22955336 FN1582-S Single Base Substitution C-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN2589-S.SNP.2:22959704 chr02:022959704 0 W/22959704-22959704 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.380007;DP=3675;DP4=1588,1841,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000744458;MQSB=0.825185;RPB=0.998634;SGB=8.58354;VDB=0.611432;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R640|1455|LOC_Os02g38000|protein_coding|CODING|LOC_Os02g38000.1|1|1) FN3470-S.SNP.2:22962298 chr02:022962298 0 W/22962298-22962298 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.16047;DP=3189;DP4=1382,1704,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.97748e-11;MQSB=0.898185;RPB=0.834181;SGB=107.526;VDB=0.97802;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1323|1455|LOC_Os02g38000|protein_coding|CODING|LOC_Os02g38000.1|5|1) FN459-S.SNP.2:22964042 chr02:022964042 0 W/22964042-22964042 FN459-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g38010 copper methylamine oxidase precursor, putative, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN4095-S.SNP.2:22964396 chr02:022964396 0 W/22964396-22964396 FN4095-S SNP A -> T AC=1;AN=182;BQB=0.899364;DP=2711;DP4=1404,1240,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00018551;MQSB=0.984441;RPB=0.464895;SGB=30.5793;VDB=0.740326;EFF=INTRON(MODIFIER||||377|LOC_Os02g38010|protein_coding|CODING|LOC_Os02g38010.1|3|1) FN828-S.SNP.2:22967334 chr02:022967334 0 W/22967334-22967334 FN828-S Single Base Substitution T-C INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3677-S.SNP.2:22967377 chr02:022967377 0 W/22967377-22967377 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.877862;DP=2893;DP4=1399,1317,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000691324;MQB=2.46608e-06;MQSB=0.945466;RPB=0.872745;SGB=43.2083;VDB=0.556976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.2:22969988 chr02:022969988 0 W/22969988-22969988 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.655976;DP=2824;DP4=1195,1545,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74784e-05;MQSB=0.925931;RPB=0.172601;SGB=21.8113;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.2:22973628 chr02:022973628 0 W/22973628-22973628 FN2304 SNP T -> C AC=1;AN=192;BQB=0.817403;DP=5297;DP4=2609,2375,16,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.11768e-23;MQSB=0.964972;RPB=0.468105;SGB=128.889;VDB=0.14645;EFF=INTRON(MODIFIER||||572|LOC_Os02g38020|protein_coding|CODING|LOC_Os02g38020.1|1|1),INTRON(MODIFIER||||509|LOC_Os02g38020|protein_coding|CODING|LOC_Os02g38020.2|1|1) FN3601-S.SNP.2:22986179 chr02:022986179 0 W/22986179-22986179 FN3601-S SNP A -> G AC=2;AN=190;BQB=0.988901;DP=2899;DP4=1493,1353,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.07952e-11;MQSB=0.889044;RPB=0.326376;SGB=76.4186;VDB=0.384573;EFF=INTRON(MODIFIER||||878|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.1|1|1),INTRON(MODIFIER||||853|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.2|1|1),INTRON(MODIFIER||||845|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.3|1|1),INTRON(MODIFIER||||594|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.5|1|1),INTRON(MODIFIER||||570|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.6|1|1),INTRON(MODIFIER||||832|LOC_Os02g38050|protein_coding|CODING|LOC_Os02g38050.4|1|1) FN3730-S.SNP.2:22992885 chr02:022992885 0 W/22992885-22992885 FN3730-S SNP G -> T AC=2;AN=190;BQB=0.511425;DP=2882;DP4=1463,1281,16,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.65902e-24;MQSB=0.972568;RPB=0.878229;SGB=166.845;VDB=0.350894;EFF=INTRON(MODIFIER||||292|LOC_Os02g38060|protein_coding|CODING|LOC_Os02g38060.1|5|1),INTRON(MODIFIER||||222|LOC_Os02g38060|protein_coding|CODING|LOC_Os02g38060.2|5|1) FN2664-S.SNP.2:22994668 chr02:022994668 0 W/22994668-22994668 FN2664-S SNP G -> A AC=2;AN=200;BQB=0.749226;DP=4810;DP4=2178,2297,26,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05723e-27;MQSB=0.98582;RPB=0.165473;SGB=7.46555;VDB=0.434218;EFF=INTRON(MODIFIER||||292|LOC_Os02g38060|protein_coding|CODING|LOC_Os02g38060.1|7|1),INTRON(MODIFIER||||222|LOC_Os02g38060|protein_coding|CODING|LOC_Os02g38060.2|6|1) FN3562-S.SNP.2:23003383 chr02:023003383 0 W/23003383-23003383 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.758521;DP=2973;DP4=1624,1278,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08216e-08;MQSB=0.986897;RPB=0.621979;SGB=28.6195;VDB=0.308334;EFF=INTRON(MODIFIER||||352|LOC_Os02g38080|protein_coding|CODING|LOC_Os02g38080.1|4|1),INTRON(MODIFIER||||352|LOC_Os02g38080|protein_coding|CODING|LOC_Os02g38080.2|4|1) FN3761-S.SNP.2:23008801 chr02:023008801 0 W/23008801-23008801 FN3761-S SNP A -> G AC=2;AN=190;BQB=0.999484;DP=2873;DP4=1539,1203,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.96549e-13;MQSB=0.947977;RPB=0.964133;SGB=71.6393;VDB=0.933228;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.2:23011169 chr02:023011169 0 W/23011169-23011169 FN984-S Single Base Substitution G-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN321-S.SNP.2:23016808 chr02:023016808 0 W/23016808-23016808 FN321-S Single Base Substitution C-T INTERGENIC HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1490-S.SNP.2:23018821 chr02:023018821 0 W/23018821-23018821 FN1490-S Single Base Substitution A-T INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN4344-S.SNP.2:23021748 chr02:023021748 0 W/23021748-23021748 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.999317;DP=1730;DP4=740,943,7,7;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=2.90586e-05;MQSB=0.0192319;RPB=0.913437;SGB=56.7575;VDB=0.459687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.2:23021799 chr02:023021799 0 W/23021799-23021799 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.974986;DP=4534;DP4=1989,2287,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97691e-06;MQSB=0.199375;RPB=0.143882;SGB=22.2439;VDB=0.548442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.2:23022021 chr02:023022021 0 W/23022021-23022021 FN3844-S SNP T -> C AC=2;AN=190;BQB=0.993247;DP=2609;DP4=1308,1021,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.67275e-11;MQSB=0.00253236;RPB=0.917867;SGB=-98.5445;VDB=0.726225;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.2:23022063 chr02:023022063 0 W/23022063-23022063 FN4208-S SNP G -> A AC=1;AN=170;BQB=0.995457;DP=1932;DP4=1058,807,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=2.56542e-06;MQSB=0.0220029;RPB=0.958481;SGB=38.3207;VDB=0.214264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.2:23027097 chr02:023027097 0 W/23027097-23027097 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.844174;DP=4152;DP4=1886,2032,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000473617;MQSB=0.79744;RPB=0.229039;SGB=35.7638;VDB=0.158012;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.2:23029100 chr02:023029100 0 W/23029100-23029100 W466-5-1 Single Base Substitution T-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1266-S.SNP.2:23031047 chr02:023031047 0 W/23031047-23031047 FN1266-S Single Base Substitution C-A INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2533-S.SNP.2:23034896 chr02:023034896 0 W/23034896-23034896 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.933572;DP=4298;DP4=2010,1959,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33241e-13;MQSB=0.999837;RPB=0.989774;SGB=22.1104;VDB=0.542624;EFF=INTRON(MODIFIER||||220|LOC_Os02g38100|protein_coding|CODING|LOC_Os02g38100.1|1|1) FN3825-S.SNP.2:23036906 chr02:023036906 0 W/23036906-23036906 FN3825-S SNP C -> A AC=1;AN=190;BQB=0.847302;DP=2692;DP4=1464,1147,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20577e-06;MQSB=0.876727;RPB=0.758835;SGB=25.439;VDB=0.0711853;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.2:23040515 chr02:023040515 0 W/23040515-23040515 FN516-S Single Base Substitution T-C INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN4011-S.SNP.2:23053713 chr02:023053713 0 W/23053713-23053713 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.991061;DP=2726;DP4=1143,1436,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22617e-12;MQSB=0.859419;RPB=0.99029;SGB=58.7637;VDB=0.431453;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.2:23065498 chr02:023065498 0 W/23065498-23065498 FN2474 SNP A -> C AC=1;AN=200;BQB=0.872268;DP=2215;DP4=1279,729,16,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000902935;MQB=9.9444e-05;MQSB=1.53563e-27;RPB=0.988274;SGB=34.6953;VDB=0.871087;EFF=INTRON(MODIFIER||||393|LOC_Os02g38130|protein_coding|CODING|LOC_Os02g38130.1|1|1) FN3653-S.SNP.2:23068216 chr02:023068216 0 W/23068216-23068216 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.924328;DP=3251;DP4=1405,1721,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000240942;MQSB=0.851868;RPB=0.995818;SGB=18.3316;VDB=0.945084;EFF=INTERGENIC(MODIFIER||||||||||1) FN-31.SNP.2:23075091 chr02:023075091 0 W/23075091-23075091 FN-31 Single Base Substitution T-C INTERGENIC Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN1460-S.SNP.2:23076808 chr02:023076808 0 W/23076808-23076808 FN1460-S Single Base Substitution T-C INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3511-S.SNP.2:23085860 chr02:023085860 0 W/23085860-23085860 FN3511-S SNP A -> G AC=2;AN=188;BQB=0.983267;DP=3740;DP4=2048,1510,18,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.41262e-15;MQSB=0.523532;RPB=0.187003;SGB=130.758;VDB=0.428028;EFF=UTR_5_PRIME(MODIFIER||1137||358|LOC_Os02g38160|protein_coding|CODING|LOC_Os02g38160.2|1|1),INTRON(MODIFIER||||389|LOC_Os02g38160|protein_coding|CODING|LOC_Os02g38160.1|1|1) FN3452-S.SNP.2:23086806 chr02:023086806 0 W/23086806-23086806 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.965972;DP=3153;DP4=1295,1544,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.41894e-11;MQSB=0.931865;RPB=0.810647;SGB=-14.1922;VDB=0.368268;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.2:23098067 chr02:023098067 0 W/23098067-23098067 FN-268 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g38170 expressed protein SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-268.SNP.2:23098654 chr02:023098654 0 W/23098654-23098654 FN-268 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3389-S.SNP.2:23117170 chr02:023117170 0 W/23117170-23117170 FN3389-S SNP A -> T AC=1;AN=184;BQB=0.99446;DP=3466;DP4=1638,1606,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.93895e-10;MQSB=0.758643;RPB=0.924994;SGB=53.3568;VDB=0.392117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S278C|519|LOC_Os02g38220|protein_coding|CODING|LOC_Os02g38220.1|1|1) FN2224-S.SNP.2:23119809 chr02:023119809 0 W/23119809-23119809 FN2224-S SNP G -> A AC=2;AN=190;BQB=0.645625;DP=4899;DP4=2343,2211,37,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.11677e-40;MQSB=0.836609;RPB=0.695347;SGB=159.015;VDB=0.917521;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q468|519|LOC_Os02g38220|protein_coding|CODING|LOC_Os02g38220.1|2|1) FN1345-S.SNP.2:23144572 chr02:023144572 0 W/23144572-23144572 FN1345-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1484-S.SNP.2:23145388 chr02:023145388 0 W/23145388-23145388 FN1484-S Single Base Substitution A-G INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2274-S.SNP.2:23147050 chr02:023147050 0 W/23147050-23147050 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.36335;DP=4659;DP4=2329,2001,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000858553;MQB=3.83979e-06;MQSB=4.6332e-18;RPB=0.537337;SGB=-155.662;VDB=0.107035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.2:23151591 chr02:023151591 0 W/23151591-23151591 FN3787-S SNP T -> G AC=1;AN=190;BQB=0.915197;DP=3432;DP4=1167,2142,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0865385;MQB=0.152799;MQSB=0;RPB=0.479698;SGB=74.7373;VDB=0.966364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.2:23152631 chr02:023152631 0 W/23152631-23152631 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.820614;DP=5065;DP4=2345,2360,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21905e-09;MQSB=0.791237;RPB=0.571466;SGB=60.9777;VDB=0.262812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.2:23155038 chr02:023155038 0 W/23155038-23155038 FN3592-S SNP G -> A AC=2;AN=188;BQB=0.844226;DP=3329;DP4=1484,1752,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.91518e-15;MQSB=0.998939;RPB=0.92778;SGB=56.5957;VDB=0.239499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.2:23156622 chr02:023156622 0 W/23156622-23156622 FN2771-S SNP T -> G AC=1;AN=198;BQB=0.982715;DP=4075;DP4=1894,1973,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.13268e-12;MQSB=0.370382;RPB=0.544272;SGB=65.3149;VDB=0.802827;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:23160778 chr02:023160778 0 W/23160778-23160778 FN2417 SNP A -> G AC=1;AN=200;BQB=0.997643;DP=5024;DP4=2528,2198,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72954e-12;MQSB=0.979387;RPB=0.994317;SGB=65.5058;VDB=0.228761;EFF=INTRON(MODIFIER||||228|LOC_Os02g38300|protein_coding|CODING|LOC_Os02g38300.1|3|1),INTRON(MODIFIER||||228|LOC_Os02g38300|protein_coding|CODING|LOC_Os02g38300.2|3|1) FN2327.SNP.2:23162394 chr02:023162394 0 W/23162394-23162394 FN2327 SNP T -> G AC=1;AN=192;BQB=0.459245;DP=5250;DP4=2776,2182,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.92485e-08;MQSB=0.964581;RPB=0.657061;SGB=-54.4513;VDB=0.666373;EFF=INTRON(MODIFIER||||228|LOC_Os02g38300|protein_coding|CODING|LOC_Os02g38300.1|1|1),INTRON(MODIFIER||||228|LOC_Os02g38300|protein_coding|CODING|LOC_Os02g38300.2|1|1) FN-234.SNP.2:23163661 chr02:023163661 0 W/23163661-23163661 FN-234 Single Base Substitution T-C INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-175.SNP.2:23166301 chr02:023166301 0 W/23166301-23166301 FN-175 Single Base Substitution C-G INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN895-S.SNP.2:23178655 chr02:023178655 0 W/23178655-23178655 FN895-S Single Base Substitution A-T INTRON HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2203-S.SNP.2:23181231 chr02:023181231 0 W/23181231-23181231 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.892632;DP=5117;DP4=2334,2509,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.88711e-09;MQSB=0.799671;RPB=0.511477;SGB=46.7622;VDB=0.654083;EFF=INTRON(MODIFIER||||428|LOC_Os02g38340|protein_coding|CODING|LOC_Os02g38340.1|8|1) FN1345-S.SNP.2:23186257 chr02:023186257 0 W/23186257-23186257 FN1345-S Single Base Substitution C-T INTRON HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1482-S.SNP.2:23187417 chr02:023187417 0 W/23187417-23187417 FN1482-S Single Base Substitution C-G INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1089-S.SNP.2:23194480 chr02:023194480 0 W/23194480-23194480 FN1089-S Single Base Substitution C-G INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2462.SNP.2:23195903 chr02:023195903 0 W/23195903-23195903 FN2462 SNP G -> A AC=1;AN=200;BQB=0.832396;DP=4365;DP4=2187,1957,5,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0132875;MQB=0.262337;MQSB=0.0262199;RPB=0.967995;SGB=54.2646;VDB=0.394235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.2:23198537 chr02:023198537 0 W/23198537-23198537 FN3950-S SNP G -> A AC=1;AN=168;BQB=0.860577;DP=3582;DP4=2016,1436,23,29;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.012842;MQB=0.0240878;MQSB=2.17219e-33;RPB=0.903532;SGB=168.55;VDB=0.85854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D602N|940|LOC_Os02g38370|protein_coding|CODING|LOC_Os02g38370.1|3|1) FN2217-S.SNP.2:23199752 chr02:023199752 0 W/23199752-23199752 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.101033;DP=6041;DP4=2582,2968,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00662142;MQB=0.94017;MQSB=1.24829e-07;RPB=0.966895;SGB=19.6499;VDB=0.96772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.2:23205859 chr02:023205859 0 W/23205859-23205859 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.996649;DP=7690;DP4=3748,3764,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0396619;MQB=0.942309;MQSB=0.912086;RPB=0.321136;SGB=71.3514;VDB=0.698692;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P165|1962|LOC_Os02g38380|protein_coding|CODING|LOC_Os02g38380.1|1|1) FN2683-S.SNP.2:23207238 chr02:023207238 0 W/23207238-23207238 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.308391;DP=4908;DP4=2336,2344,7,5;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0892421;MQB=0.998706;MQSB=0;RPB=0.98197;SGB=49.6594;VDB=0.181006;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.2:23212518 chr02:023212518 0 W/23212518-23212518 FN282-S Single Base Substitution T-A INTRON HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2648-S.SNP.2:23214240 chr02:023214240 0 W/23214240-23214240 FN2648-S SNP A -> T AC=1;AN=200;BQB=0.720716;DP=5012;DP4=2536,2270,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199521;MQB=5.66147e-10;MQSB=0.992677;RPB=0.788135;SGB=63.4749;VDB=0.384463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E494V|734|LOC_Os02g38392|protein_coding|CODING|LOC_Os02g38392.1|2|1) FN-394.SNP.2:23218132 chr02:023218132 0 W/23218132-23218132 FN-394 Single Base Substitution T-A INTRON HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3389-S.SNP.2:23223413 chr02:023223413 0 W/23223413-23223413 FN3389-S SNP G -> T AC=1;AN=184;BQB=0.910575;DP=3631;DP4=1403,2094,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.875e-11;MQSB=0.802137;RPB=0.928594;SGB=84.9167;VDB=0.371954;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.2:23230069 chr02:023230069 0 W/23230069-23230069 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2497.SNP.2:23233560 chr02:023233560 0 W/23233560-23233560 FN2497 SNP T -> C AC=1;AN=200;BQB=0.999451;DP=4085;DP4=2082,1694,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.81815e-06;MQSB=0.132071;RPB=0.548622;SGB=35.8441;VDB=0.472523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.2:23248002 chr02:023248002 0 W/23248002-23248002 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.016234;DP=4393;DP4=2120,2027,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.72257e-18;MQSB=0.986532;RPB=0.549052;SGB=127.666;VDB=0.989386;EFF=INTERGENIC(MODIFIER||||||||||1) FN876-S.SNP.2:23253039 chr02:023253039 0 W/23253039-23253039 FN876-S Single Base Substitution C-T INTRON HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN-94.SNP.2:23256207 chr02:023256207 0 W/23256207-23256207 FN-94 Single Base Substitution T-C INTRON HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1310-S.SNP.2:23264090 chr02:023264090 0 W/23264090-23264090 FN1310-S Single Base Substitution T-C INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1104-S.SNP.2:23267859 chr02:023267859 0 W/23267859-23267859 FN1104-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g38480 expressed protein SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1061-S.SNP.2:23269000 chr02:023269000 0 W/23269000-23269000 FN1061-S Single Base Substitution C-T INTRON HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2210-S.SNP.2:23269391 chr02:023269391 0 W/23269391-23269391 FN2210-S SNP A -> G AC=1;AN=190;BQB=0.892987;DP=5280;DP4=2414,2543,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80803e-13;MQSB=0.338381;RPB=0.998952;SGB=44.0907;VDB=0.609251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N1249S|1765|LOC_Os02g38480|protein_coding|CODING|LOC_Os02g38480.1|4|1) FN709-S.SNP.2:23272443 chr02:023272443 0 W/23272443-23272443 FN709-S Single Base Substitution T-A INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN2403.SNP.2:23302969 chr02:023302969 0 W/23302969-23302969 FN2403 SNP C -> G AC=1;AN=200;BQB=0.00628303;DP=4493;DP4=1981,2179,36,12;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.144002;MQB=3.10919e-05;MQSB=1.03614e-26;RPB=1.13803e-09;SGB=-941.758;VDB=0.000184564;EFF=INTRON(MODIFIER||||321|LOC_Os02g38540|protein_coding|CODING|LOC_Os02g38540.1|1|1) FN3427-S.SNP.2:23306641 chr02:023306641 0 W/23306641-23306641 FN3427-S SNP C -> T AC=1;AN=184;BQB=0.815808;DP=3412;DP4=1672,1661,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0674091;MQB=0.567273;MQSB=0.00114061;RPB=0.975831;SGB=5.28054;VDB=0.884573;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q798*|1446|LOC_Os02g38550|protein_coding|CODING|LOC_Os02g38550.1|1|1);LOF=(LOC_Os02g38550|LOC_Os02g38550|1|1.00);NMD=(LOC_Os02g38550|LOC_Os02g38550|1|1.00) FN1543-S.SNP.2:23314978 chr02:023314978 0 W/23314978-23314978 FN1543-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1543-S.SNP.2:23314992 chr02:023314992 0 W/23314992-23314992 FN1543-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g38570 retrotransposon protein, putative, unclassified, expressed SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1543-S.SNP.2:23314999 chr02:023314999 0 W/23314999-23314999 FN1543-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN3442-S.SNP.2:23315378 chr02:023315378 0 W/23315378-23315378 FN3442-S SNP G -> T AC=1;AN=184;BQB=0.618487;DP=3309;DP4=1711,1485,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.133273;MQB=0.025648;MQSB=9.67569e-14;RPB=0.779857;SGB=75.8731;VDB=0.227215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P381Q|1046|LOC_Os02g38570|protein_coding|CODING|LOC_Os02g38570.1|1|1) FN2479.SNP.2:23343033 chr02:023343033 0 W/23343033-23343033 FN2479 SNP C -> T AC=1;AN=200;BQB=0.580201;DP=7603;DP4=2996,4179,17,13;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.124688;MQB=0.114125;MQSB=3.10294e-22;RPB=0.134132;SGB=63.3521;VDB=0.0963798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A439V|699|LOC_Os02g38620|protein_coding|CODING|LOC_Os02g38620.1|4|1) FN1606-S.SNP.2:23347680 chr02:023347680 0 W/23347680-23347680 FN1606-S Single Base Substitution G-A INTRON HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. W470-2-1.SNP.2:23348223 chr02:023348223 0 W/23348223-23348223 W470-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g38630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2435.SNP.2:23348544 chr02:023348544 0 W/23348544-23348544 FN2435 SNP C -> T AC=1;AN=200;BQB=0.921246;DP=7113;DP4=3077,3592,10,8;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0870238;MQB=0.347101;MQSB=2.15503e-13;RPB=0.345159;SGB=54.6902;VDB=0.293208;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W885*|1412|LOC_Os02g38630|protein_coding|CODING|LOC_Os02g38630.1|1|1);LOF=(LOC_Os02g38630|LOC_Os02g38630|1|1.00);NMD=(LOC_Os02g38630|LOC_Os02g38630|1|1.00) FN1068-S.SNP.2:23354877 chr02:023354877 0 W/23354877-23354877 FN1068-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g38640 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1401-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN1401-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2432.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN2432 SNP G -> A AC=1;AN=200;BQB=0.580289;DP=3774;DP4=1701,1654,11,13;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.163752;MQB=0.984656;MQSB=0;RPB=0.995121;SGB=104.921;VDB=0.17428;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A139|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|1|1) FN3564-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN3564-S SNP G -> A AC=2;AN=188;BQB=0.999982;DP=4020;DP4=1781,2114,13,28;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.139552;MQB=0.966258;MQSB=0;RPB=0.982504;SGB=135.196;VDB=0.244711;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A139|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|1|1) FN3787-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN3787-S SNP G -> A AC=2;AN=190;BQB=0.983751;DP=2902;DP4=1291,1496,9,18;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.131978;MQB=0.756467;MQSB=0;RPB=0.823361;SGB=117.403;VDB=0.204985;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A139|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|1|1) FN3998-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN3998-S SNP G -> A AC=2;AN=168;BQB=0.96924;DP=2326;DP4=1073,1160,11,9;HOB=0.0235261;ICB=0.494119;MQ=29;MQ0F=0.146604;MQB=0.988579;MQSB=0;RPB=0.877219;SGB=83.1885;VDB=0.786219;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A139|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|1|1) FN533-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN533-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN626-S.SNP.2:23358219 chr02:023358219 0 W/23358219-23358219 FN626-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3673-S.SNP.2:23358993 chr02:023358993 0 W/23358993-23358993 FN3673-S SNP T -> A AC=1;AN=190;BQB=0.996237;DP=2582;DP4=1571,929,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0274981;MQB=0.0511909;MQSB=6.63873e-06;RPB=0.800898;SGB=43.2083;VDB=0.850592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F169Y|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|2|1) FN3854-S.SNP.2:23360635 chr02:023360635 0 W/23360635-23360635 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.962894;DP=2864;DP4=1389,1376,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0974162;MQB=0.547622;MQSB=0.0248412;RPB=0.543585;SGB=23.9652;VDB=0.635404;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R716|1274|LOC_Os02g38650|protein_coding|CODING|LOC_Os02g38650.1|2|1) FN1080-S.SNP.2:23366033 chr02:023366033 0 W/23366033-23366033 FN1080-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1309-S.SNP.2:23390089 chr02:023390089 0 W/23390089-23390089 FN1309-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g38690 protein phosphatase 2C containing protein, expressed SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN584-S.SNP.2:23402767 chr02:023402767 0 W/23402767-23402767 FN584-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g38710 protein phosphatase 2C containing protein, expressed SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1484-S.SNP.2:23415048 chr02:023415048 0 W/23415048-23415048 FN1484-S Single Base Substitution A-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN443-S.SNP.2:23415461 chr02:023415461 0 W/23415461-23415461 FN443-S Single Base Substitution G-A INTERGENIC HOMO SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN4090-S.SNP.2:23415928 chr02:023415928 0 W/23415928-23415928 FN4090-S SNP T -> C AC=1;AN=182;BQB=0.957518;DP=3329;DP4=1527,1717,15,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.7797e-11;MQSB=0.95867;RPB=0.988412;SGB=84.7091;VDB=0.230449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.2:23416620 chr02:023416620 0 W/23416620-23416620 FN3869-S SNP G -> C AC=1;AN=158;BQB=0.899203;DP=2237;DP4=1005,1143,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.90779e-06;MQSB=0.945772;RPB=0.546075;SGB=20.5959;VDB=0.10981;EFF=UTR_3_PRIME(MODIFIER||10||202|LOC_Os02g38740|protein_coding|CODING|LOC_Os02g38740.1|1|1) FN2307.SNP.2:23430623 chr02:023430623 0 W/23430623-23430623 FN2307 SNP G -> A AC=1;AN=192;BQB=0.29238;DP=3947;DP4=2031,1693,11,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000760071;MQB=1.0619e-08;MQSB=0.964207;RPB=0.997571;SGB=4.22611;VDB=0.581373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.2:23431602 chr02:023431602 0 W/23431602-23431602 FN2706-S SNP C -> T AC=2;AN=200;BQB=0.792326;DP=4638;DP4=2217,2138,24,29;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00560586;MQB=1.74332e-14;MQSB=0.377963;RPB=0.176344;SGB=-395.13;VDB=0.262898;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.2:23436209 chr02:023436209 0 W/23436209-23436209 FN2311 SNP G -> A AC=1;AN=192;BQB=0.486638;DP=4334;DP4=2369,1534,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.43281e-07;MQSB=0.307014;RPB=0.966585;SGB=23.7852;VDB=0.378999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G180E|652|LOC_Os02g38780|protein_coding|CODING|LOC_Os02g38780.1|7|1),SPLICE_SITE_REGION(LOW||||652|LOC_Os02g38780|protein_coding|CODING|LOC_Os02g38780.1|7|1),SPLICE_SITE_REGION(LOW||||251|LOC_Os02g38780|protein_coding|CODING|LOC_Os02g38780.2|9|1),UTR_5_PRIME(MODIFIER||4687||251|LOC_Os02g38780|protein_coding|CODING|LOC_Os02g38780.2|9|1) FN3610-S.SNP.2:23445795 chr02:023445795 0 W/23445795-23445795 FN3610-S SNP G -> A AC=1;AN=190;BQB=0.828059;DP=2838;DP4=1573,1150,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4142e-05;MQSB=0.861587;RPB=0.996957;SGB=44.5415;VDB=0.836722;EFF=INTRON(MODIFIER||||471|LOC_Os02g38790|protein_coding|CODING|LOC_Os02g38790.1|5|1) FN790-S.SNP.2:23454239 chr02:023454239 0 W/23454239-23454239 FN790-S Single Base Substitution C-A INTRON HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN2160-S.SNP.2:23454751 chr02:023454751 0 W/23454751-23454751 FN2160-S SNP A -> T AC=1;AN=168;BQB=0.298981;DP=2932;DP4=1227,1672,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00015467;MQSB=0.992672;RPB=0.99096;SGB=-36.0898;VDB=0.0252243;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.2:23455336 chr02:023455336 0 W/23455336-23455336 FN435-S Single Base Substitution C-G INTRON HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN2395.SNP.2:23456604 chr02:023456604 0 W/23456604-23456604 FN2395 SNP T -> G AC=1;AN=200;BQB=0.999514;DP=4928;DP4=2429,2190,15,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000202922;MQB=4.2737e-09;MQSB=0.00743011;RPB=0.823505;SGB=65.5058;VDB=0.369965;EFF=INTRON(MODIFIER||||517|LOC_Os02g38804|protein_coding|CODING|LOC_Os02g38804.1|1|1) FN_769-4-1.SNP.2:23470544 chr02:023470544 0 W/23470544-23470544 FN_769-4-1 Single Base Substitution A-C HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN3698-S.SNP.2:23473132 chr02:023473132 0 W/23473132-23473132 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.917383;DP=3132;DP4=1482,1538,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0217114;MQB=0.0203249;MQSB=0.110747;RPB=0.173797;SGB=58.2031;VDB=0.604518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.2:23473348 chr02:023473348 0 W/23473348-23473348 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.998598;DP=5771;DP4=3012,2476,12,8;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.253509;MQB=0.510051;MQSB=0;RPB=0.378941;SGB=61.9006;VDB=0.51241;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.2:23478053 chr02:023478053 0 W/23478053-23478053 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN-213.SNP.2:23479114 chr02:023479114 0 W/23479114-23479114 FN-213 Single Base Substitution G-A INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN1443-S.SNP.2:23501150 chr02:023501150 0 W/23501150-23501150 FN1443-S Single Base Substitution T-G INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2780-S.SNP.2:23505711 chr02:023505711 0 W/23505711-23505711 FN2780-S SNP A -> G AC=1;AN=198;BQB=0.959506;DP=4514;DP4=2264,1979,21,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.36825e-18;MQSB=0.70533;RPB=0.96689;SGB=150.641;VDB=0.864198;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.2:23506511 chr02:023506511 0 W/23506511-23506511 FN4105-S SNP A -> T AC=1;AN=182;BQB=0.987325;DP=2964;DP4=1436,1450,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=9.27177e-07;MQSB=0.999387;RPB=0.426231;SGB=48.6223;VDB=0.59634;EFF=INTERGENIC(MODIFIER||||||||||1) FN2197-S.SNP.2:23508454 chr02:023508454 0 W/23508454-23508454 FN2197-S SNP C -> T AC=2;AN=190;BQB=0.82385;DP=4882;DP4=2014,2448,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.78224e-15;MQSB=0.930742;RPB=0.754306;SGB=82.301;VDB=0.110384;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R142|143|LOC_Os02g38880|protein_coding|CODING|LOC_Os02g38880.1|2|1) FN755-S.SNP.2:23508454 chr02:023508454 0 W/23508454-23508454 FN755-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN967-S.SNP.2:23508454 chr02:023508454 0 W/23508454-23508454 FN967-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN-250.SNP.2:23549066 chr02:023549066 0 W/23549066-23549066 FN-250 Single Base Substitution G-A UTR_3_PRIME HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1316-S.SNP.2:23550790 chr02:023550790 0 W/23550790-23550790 FN1316-S Single Base Substitution C-T INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1514-S.SNP.2:23553266 chr02:023553266 0 W/23553266-23553266 FN1514-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4260-S.SNP.2:23554885 chr02:023554885 0 W/23554885-23554885 FN4260-S SNP A -> C AC=1;AN=170;BQB=0.902187;DP=2409;DP4=1170,1061,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19016e-13;MQSB=0.869058;RPB=0.368859;SGB=18.759;VDB=0.046833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.2:23559472 chr02:023559472 0 W/23559472-23559472 FN1170-S Single Base Substitution T-C INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN712-S.SNP.2:23559698 chr02:023559698 0 W/23559698-23559698 FN712-S Single Base Substitution G-A INTERGENIC HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1278-S.SNP.2:23561874 chr02:023561874 0 W/23561874-23561874 FN1278-S Single Base Substitution G-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2140-S.SNP.2:23565278 chr02:023565278 0 W/23565278-23565278 FN2140-S SNP A -> G AC=1;AN=168;BQB=0.04814;DP=3861;DP4=1990,1823,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.71843e-10;MQSB=0.805866;RPB=0.679393;SGB=-182.327;VDB=0.537108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E677G|693|LOC_Os02g39010|protein_coding|CODING|LOC_Os02g39010.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E677G|693|LOC_Os02g39010|protein_coding|CODING|LOC_Os02g39010.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E677G|693|LOC_Os02g39010|protein_coding|CODING|LOC_Os02g39010.3|7|1) FN1358-S.SNP.2:23567489 chr02:023567489 0 W/23567489-23567489 FN1358-S Single Base Substitution T-A INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN2558-S.SNP.2:23567659 chr02:023567659 0 W/23567659-23567659 FN2558-S SNP C -> G AC=1;AN=198;BQB=0.225643;DP=3929;DP4=1856,1837,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.38825e-12;MQSB=0.963815;RPB=0.796984;SGB=-10.2651;VDB=0.836281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.2:23592516 chr02:023592516 0 W/23592516-23592516 FN2706-S SNP G -> A AC=2;AN=200;BQB=0.0780515;DP=4974;DP4=2170,2523,30,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.53572e-27;MQSB=0.997093;RPB=0.836521;SGB=64.0657;VDB=0.942605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.2:23599789 chr02:023599789 0 W/23599789-23599789 FN3363-S SNP T -> A AC=2;AN=184;BQB=0.998778;DP=2666;DP4=1201,1368,8,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.86562e-15;MQSB=0.691684;RPB=0.999611;SGB=112.047;VDB=0.257165;EFF=INTRON(MODIFIER||||135|LOC_Os02g39070|protein_coding|CODING|LOC_Os02g39070.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g39070|protein_coding|CODING|LOC_Os02g39070.2|3|1) FN786-S.SNP.2:23607059 chr02:023607059 0 W/23607059-23607059 FN786-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN672-S.SNP.2:23618525 chr02:023618525 0 W/23618525-23618525 FN672-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN4070-S.SNP.2:23619290 chr02:023619290 0 W/23619290-23619290 FN4070-S SNP G -> A AC=1;AN=182;BQB=0.985782;DP=8407;DP4=4073,4187,23,17;HOB=6.03792e-05;ICB=0.000121422;MQ=28;MQ0F=0.0584037;MQB=6.05013e-05;MQSB=1.58195e-18;RPB=0.504565;SGB=130.421;VDB=0.0328907;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P515|2027|LOC_Os02g39110|protein_coding|CODING|LOC_Os02g39110.1|1|1) FN1586-S.SNP.2:23621980 chr02:023621980 0 W/23621980-23621980 FN1586-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g39110 retrotransposon protein, putative, unclassified, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1586-S.SNP.2:23621984 chr02:023621984 0 W/23621984-23621984 FN1586-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2298.SNP.2:23630107 chr02:023630107 0 W/23630107-23630107 FN2298 SNP C -> T AC=2;AN=192;BQB=0.834198;DP=4107;DP4=1850,1870,27,20;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000243487;MQB=1.20698e-14;MQSB=3.89266e-12;RPB=0.0715516;SGB=208.963;VDB=0.0511035;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.2:23630707 chr02:023630707 0 W/23630707-23630707 FN429-S Single Base Substitution T-A INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-182.SNP.2:23632209 chr02:023632209 0 W/23632209-23632209 FN-182 Single Base Substitution G-T INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2449.SNP.2:23634852 chr02:023634852 0 W/23634852-23634852 FN2449 SNP C -> T AC=1;AN=200;BQB=0.294982;DP=5364;DP4=2455,2625,11,9;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0741984;MQB=0.835276;MQSB=1.21123e-06;RPB=0.51206;SGB=61.9006;VDB=0.559971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E230K|306|LOC_Os02g39130|protein_coding|CODING|LOC_Os02g39130.1|2|1) FN4314-S.SNP.2:23634852 chr02:023634852 0 W/23634852-23634852 FN4314-S SNP C -> T AC=2;AN=170;BQB=0.817647;DP=2818;DP4=1396,1299,17,18;HOB=0.0232526;ICB=0.494188;MQ=35;MQ0F=0.0816182;MQB=0.98886;MQSB=2.85429e-22;RPB=0.981862;SGB=150.053;VDB=0.805707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E230K|306|LOC_Os02g39130|protein_coding|CODING|LOC_Os02g39130.1|2|1) FN-89.SNP.2:23645194 chr02:023645194 0 W/23645194-23645194 FN-89 Single Base Substitution C-G INTRON HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3491-S.SNP.2:23647112 chr02:023647112 0 W/23647112-23647112 FN3491-S SNP C -> T AC=2;AN=188;BQB=0.981666;DP=2700;DP4=1119,1461,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.6267e-08;MQSB=0.914236;RPB=0.872512;SGB=67.1521;VDB=0.593111;EFF=INTRON(MODIFIER||||300|LOC_Os02g39140|protein_coding|CODING|LOC_Os02g39140.1|1|1),INTRON(MODIFIER||||263|LOC_Os02g39140|protein_coding|CODING|LOC_Os02g39140.2|1|1) FN3849-S.SNP.2:23658612 chr02:023658612 0 W/23658612-23658612 FN3849-S SNP T -> A AC=1;AN=158;BQB=0.985407;DP=2171;DP4=951,1099,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.71341e-07;MQSB=0.970782;RPB=0.995465;SGB=28.5576;VDB=0.201148;EFF=INTRON(MODIFIER||||744|LOC_Os02g39160|protein_coding|CODING|LOC_Os02g39160.1|1|1) 706-1.SNP.2:23658613 chr02:023658613 0 W/23658613-23658613 706-1 Single Base Substitution A-T INTRON Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1080-S.SNP.2:23658613 chr02:023658613 0 W/23658613-23658613 FN1080-S Single Base Substitution A-T INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2725-S.SNP.2:23658613 chr02:023658613 0 W/23658613-23658613 FN2725-S SNP A -> T AC=2;AN=200;BQB=0.759377;DP=4040;DP4=1743,2081,19,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.88415e-16;MQSB=0.988478;RPB=0.724624;SGB=60.747;VDB=0.207319;EFF=INTRON(MODIFIER||||744|LOC_Os02g39160|protein_coding|CODING|LOC_Os02g39160.1|1|1) W706-3-1.SNP.2:23658613 chr02:023658613 0 W/23658613-23658613 W706-3-1 Single Base Substitution A-T INTRON HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN-412.SNP.2:23660971 chr02:023660971 0 W/23660971-23660971 FN-412 Single Base Substitution G-A INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN548-S.SNP.2:23662535 chr02:023662535 0 W/23662535-23662535 FN548-S Single Base Substitution G-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN3360-S.SNP.2:23668833 chr02:023668833 0 W/23668833-23668833 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.988307;DP=3447;DP4=1893,1445,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82762e-13;MQSB=0.937821;RPB=0.495722;SGB=63.9222;VDB=0.577705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.2:23668846 chr02:023668846 0 W/23668846-23668846 FN2621-S SNP C -> T AC=2;AN=200;BQB=0.893679;DP=4740;DP4=2399,2044,37,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.39242e-40;MQSB=0.988674;RPB=0.908592;SGB=283.882;VDB=0.965322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.2:23668846 chr02:023668846 0 W/23668846-23668846 FN3282-S SNP C -> T AC=1;AN=184;BQB=0.998255;DP=3489;DP4=1941,1453,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40163e-06;MQSB=0.949882;RPB=0.806752;SGB=48.7425;VDB=0.0433325;EFF=INTERGENIC(MODIFIER||||||||||1) W475-4-2.SNP.2:23668846 chr02:023668846 0 W/23668846-23668846 W475-4-2 Single Base Substitution C-T INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3454-S.SNP.2:23670145 chr02:023670145 0 W/23670145-23670145 FN3454-S SNP C -> T AC=1;AN=184;BQB=0.973185;DP=2583;DP4=1240,1268,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95456e-10;MQSB=0.999726;RPB=0.844907;SGB=25.7969;VDB=0.791925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.2:23673120 chr02:023673120 0 W/23673120-23673120 FN3486-S SNP A -> G AC=1;AN=184;BQB=0.893167;DP=2572;DP4=1380,1114,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.13462e-12;MQSB=0.958481;RPB=0.801535;SGB=75.8731;VDB=0.95759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.2:23674826 chr02:023674826 0 W/23674826-23674826 FN2314 SNP A -> T AC=1;AN=192;BQB=0.718038;DP=4874;DP4=2265,2347,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.59713e-06;MQSB=0.997243;RPB=0.938598;SGB=1.09742;VDB=0.337088;EFF=INTRON(MODIFIER||||325|LOC_Os02g39190|protein_coding|CODING|LOC_Os02g39190.1|5|1) FN2703-S.SNP.2:23675380 chr02:023675380 0 W/23675380-23675380 FN2703-S SNP C -> T AC=2;AN=200;BQB=0.0322746;DP=4583;DP4=2195,2101,7,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.30911e-10;MQSB=0.999171;RPB=0.825188;SGB=91.1059;VDB=0.639121;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q142|325|LOC_Os02g39190|protein_coding|CODING|LOC_Os02g39190.1|4|1) FN2432.SNP.2:23686398 chr02:023686398 0 W/23686398-23686398 FN2432 SNP G -> A AC=1;AN=200;BQB=0.642303;DP=5215;DP4=2443,2475,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000191755;MQB=1.1504e-14;MQSB=0.886298;RPB=0.974335;SGB=50.3263;VDB=0.307432;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.2:23691737 chr02:023691737 0 W/23691737-23691737 FN886-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN4175-S.SNP.2:23699389 chr02:023699389 0 W/23699389-23699389 FN4175-S SNP G -> A AC=1;AN=170;BQB=0.996348;DP=2650;DP4=1309,1259,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.38207e-08;MQSB=0.9999;RPB=0.838718;SGB=45.206;VDB=0.824046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.2:23707051 chr02:023707051 0 W/23707051-23707051 FN3769-S SNP T -> A AC=1;AN=190;BQB=0.771759;DP=2866;DP4=1378,1374,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.89423e-07;MQSB=0.936689;RPB=0.634999;SGB=25.439;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.2:23710670 chr02:023710670 0 W/23710670-23710670 FN851-S Single Base Substitution C-G INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN4166-S.SNP.2:23729620 chr02:023729620 0 W/23729620-23729620 FN4166-S SNP G -> A AC=1;AN=170;BQB=0.949028;DP=2852;DP4=1375,1410,9,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05129e-05;MQSB=0.999082;RPB=0.609831;SGB=38.987;VDB=0.667402;EFF=INTRON(MODIFIER||||418|LOC_Os02g39300|protein_coding|CODING|LOC_Os02g39300.1|1|1) FN4166-S.SNP.2:23729621 chr02:023729621 0 W/23729621-23729621 FN4166-S SNP C -> A AC=1;AN=170;BQB=0.94729;DP=2873;DP4=1397,1391,8,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.15922e-05;MQSB=0.992367;RPB=0.96459;SGB=34.5445;VDB=0.617041;EFF=INTRON(MODIFIER||||418|LOC_Os02g39300|protein_coding|CODING|LOC_Os02g39300.1|1|1) FN923-S.SNP.2:23735786 chr02:023735786 0 W/23735786-23735786 FN923-S Single Base Substitution G-A INTERGENIC HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2094-S.SNP.2:23737956 chr02:023737956 0 W/23737956-23737956 FN2094-S SNP A -> T AC=1;AN=168;BQB=0.894343;DP=2675;DP4=1477,1155,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.26047e-11;MQSB=0.996083;RPB=0.812656;SGB=12.7756;VDB=0.849484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.2:23738749 chr02:023738749 0 W/23738749-23738749 FN3595-S SNP T -> A AC=1;AN=190;BQB=0.818211;DP=2208;DP4=1072,1002,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000108073;MQSB=0.819096;RPB=0.625155;SGB=10.8904;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.2:23748269 chr02:023748269 0 W/23748269-23748269 FN1533-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g39340 glycine-rich protein, putative, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN3347-S.SNP.2:23749437 chr02:023749437 0 W/23749437-23749437 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.992001;DP=2702;DP4=1257,1362,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.6433e-10;MQSB=0.98821;RPB=0.952853;SGB=53.3568;VDB=0.662305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G516E|522|LOC_Os02g39350|protein_coding|CODING|LOC_Os02g39350.1|13|1) FN1097-S.SNP.2:23749874 chr02:023749874 0 W/23749874-23749874 FN1097-S Single Base Substitution A-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1759-S.SNP.2:23757626 chr02:023757626 0 W/23757626-23757626 FN1759-S SNP A -> C AC=2;AN=188;BQB=0.911427;DP=2773;DP4=1262,1471,13,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.18085e-15;MQSB=0.935854;RPB=0.409123;SGB=89.1337;VDB=0.700225;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.2:23761073 chr02:023761073 0 W/23761073-23761073 FN1512-S Single Base Substitution A-T INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3445-S.SNP.2:23765442 chr02:023765442 0 W/23765442-23765442 FN3445-S SNP A -> T AC=2;AN=184;BQB=0.932283;DP=2920;DP4=1423,1226,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19396e-11;MQSB=0.985498;RPB=0.890427;SGB=67.4439;VDB=0.843507;EFF=INTRON(MODIFIER||||508|LOC_Os02g39370|protein_coding|CODING|LOC_Os02g39370.1|2|1) FN-158.SNP.2:23770014 chr02:023770014 0 W/23770014-23770014 FN-158 Single Base Substitution T-C INTRON HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN2437.SNP.2:23779287 chr02:023779287 0 W/23779287-23779287 FN2437 SNP C -> A AC=1;AN=200;BQB=0.902565;DP=5214;DP4=2415,2466,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10042e-16;MQSB=0.915737;RPB=0.444145;SGB=-3.42751;VDB=0.705713;EFF=INTRON(MODIFIER||||488|LOC_Os02g39410|protein_coding|CODING|LOC_Os02g39410.1|4|1),INTRON(MODIFIER||||340|LOC_Os02g39410|protein_coding|CODING|LOC_Os02g39410.2|3|1),INTRON(MODIFIER||||257|LOC_Os02g39410|protein_coding|CODING|LOC_Os02g39410.3|3|1) FN1513-S.SNP.2:23781800 chr02:023781800 0 W/23781800-23781800 FN1513-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g39410 protein phosphatase 2C, putative, expressed SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2197-S.SNP.2:23785751 chr02:023785751 0 W/23785751-23785751 FN2197-S SNP G -> C AC=2;AN=190;BQB=0.336521;DP=3610;DP4=1765,1563,12,4;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000277008;MQB=0.000133481;MQSB=0.85536;RPB=0.0798831;SGB=67.3108;VDB=0.370442;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A61|390|LOC_Os02g39420|protein_coding|CODING|LOC_Os02g39420.1|1|1) FN755-S.SNP.2:23785751 chr02:023785751 0 W/23785751-23785751 FN755-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN967-S.SNP.2:23785751 chr02:023785751 0 W/23785751-23785751 FN967-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN547-S.SNP.2:23790706 chr02:023790706 0 W/23790706-23790706 FN547-S Single Base Substitution T-A INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2749-S.SNP.2:23796244 chr02:023796244 0 W/23796244-23796244 FN2749-S SNP C -> T AC=2;AN=200;BQB=0.067998;DP=4424;DP4=1780,2223,6,11;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00384268;MQB=3.28401e-05;MQSB=0.261834;RPB=0.951986;SGB=72.6852;VDB=0.814826;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G192|293|LOC_Os02g39450|protein_coding|CODING|LOC_Os02g39450.1|1|1) FN425-S.SNP.2:23796244 chr02:023796244 0 W/23796244-23796244 FN425-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN3521-S.SNP.2:23796952 chr02:023796952 0 W/23796952-23796952 FN3521-S SNP G -> A AC=2;AN=188;BQB=0.999887;DP=4270;DP4=2024,2147,10,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000936768;MQB=1.5207e-10;MQSB=0.21031;RPB=0.837;SGB=135.302;VDB=0.572022;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.2:23796952 chr02:023796952 0 W/23796952-23796952 FN4113-S SNP G -> A AC=2;AN=182;BQB=0.987562;DP=3279;DP4=1415,1750,16,31;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000914913;MQB=9.78092e-14;MQSB=0.99996;RPB=0.934391;SGB=206.502;VDB=0.854339;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.2:23796952 chr02:023796952 0 W/23796952-23796952 FN4165-S SNP G -> A AC=2;AN=170;BQB=0.725518;DP=2502;DP4=1126,1277,11,13;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00119904;MQB=1.20997e-08;MQSB=0.307774;RPB=0.483368;SGB=72.7472;VDB=0.530343;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.2:23800206 chr02:023800206 0 W/23800206-23800206 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.996679;DP=2440;DP4=1152,1179,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000409836;MQB=1.63971e-06;MQSB=0.608445;RPB=0.413957;SGB=52.3148;VDB=0.57234;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.2:23801580 chr02:023801580 0 W/23801580-23801580 FN994-S Single Base Substitution C-T INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN858-S.SNP.2:23801868 chr02:023801868 0 W/23801868-23801868 FN858-S Single Base Substitution T-A INTERGENIC HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2619-S.SNP.2:23801961 chr02:023801961 0 W/23801961-23801961 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.878767;DP=3425;DP4=1327,1651,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73927e-15;MQSB=0.315617;RPB=0.959896;SGB=108.456;VDB=0.647616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.2:23807078 chr02:023807078 0 W/23807078-23807078 FN2350 SNP G -> C AC=2;AN=192;BQB=0.783285;DP=4940;DP4=2005,2449,26,35;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00850202;MQB=2.67814e-24;MQSB=0.182132;RPB=0.759938;SGB=141.745;VDB=0.265068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.2:23813877 chr02:023813877 0 W/23813877-23813877 FN2172-S SNP G -> T AC=2;AN=168;BQB=0.408938;DP=2938;DP4=1369,1506,10,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.76123e-13;MQSB=0.825395;RPB=0.829816;SGB=21.3605;VDB=0.607275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H510N|971|LOC_Os02g39470|protein_coding|CODING|LOC_Os02g39470.1|13|1) 702-6.SNP.2:23819739 chr02:023819739 0 W/23819739-23819739 702-6 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os02g39470 cyclin, N-terminal domain containing protein, expressed SNo: 1447, Mutant_ID: 702-6, Generation: M2, Mutations: 26, Genes: 20, Seed availability: Yes. FN2498.SNP.2:23827789 chr02:023827789 0 W/23827789-23827789 FN2498 SNP C -> T AC=1;AN=200;BQB=0.311291;DP=4779;DP4=2321,2169,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69203e-14;MQSB=0.963141;RPB=0.447664;SGB=55.5366;VDB=0.180533;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.2:23831939 chr02:023831939 0 W/23831939-23831939 FN801-S Single Base Substitution C-A INTRON HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN2124-S.SNP.2:23833839 chr02:023833839 0 W/23833839-23833839 FN2124-S SNP G -> A AC=1;AN=168;BQB=0.569742;DP=3084;DP4=1409,1628,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.66004e-12;MQSB=0.968186;RPB=0.922734;SGB=-12.7876;VDB=0.393445;EFF=INTRON(MODIFIER||||298|LOC_Os02g39490|protein_coding|CODING|LOC_Os02g39490.1|2|1) FN1572-S.SNP.2:23844830 chr02:023844830 0 W/23844830-23844830 FN1572-S Single Base Substitution G-A INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN702-S.SNP.2:23849577 chr02:023849577 0 W/23849577-23849577 FN702-S Single Base Substitution G-A INTERGENIC HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3454-S.SNP.2:23853597 chr02:023853597 0 W/23853597-23853597 FN3454-S SNP A -> G AC=1;AN=184;BQB=0.766559;DP=2756;DP4=1181,1425,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.66358e-06;MQSB=0.997526;RPB=0.995632;SGB=13.188;VDB=0.158821;EFF=UTR_3_PRIME(MODIFIER||91||853|LOC_Os02g39520|protein_coding|CODING|LOC_Os02g39520.1|7|1),INTRON(MODIFIER||||853|LOC_Os02g39520|protein_coding|CODING|LOC_Os02g39520.2|7|1) FN395-S.SNP.2:23856293 chr02:023856293 0 W/23856293-23856293 FN395-S Single Base Substitution A-C INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1274-S.SNP.2:23859759 chr02:023859759 0 W/23859759-23859759 FN1274-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN3532-S.SNP.2:23862770 chr02:023862770 0 W/23862770-23862770 FN3532-S SNP A -> T AC=2;AN=188;BQB=0.999744;DP=2595;DP4=1314,1190,29,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.30396e-27;MQSB=0.852092;RPB=0.40827;SGB=197.941;VDB=0.786574;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R570W|820|LOC_Os02g39540|protein_coding|CODING|LOC_Os02g39540.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R570W|818|LOC_Os02g39540|protein_coding|CODING|LOC_Os02g39540.2|3|1) FN898-S.SNP.2:23864287 chr02:023864287 0 W/23864287-23864287 FN898-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2171-S.SNP.2:23871954 chr02:023871954 0 W/23871954-23871954 FN2171-S SNP C -> A AC=1;AN=168;BQB=0.230007;DP=4276;DP4=2291,1939,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.48372e-08;MQSB=0.978038;RPB=0.8176;SGB=-64.9298;VDB=0.360129;EFF=INTRON(MODIFIER||||767|LOC_Os02g39550|protein_coding|CODING|LOC_Os02g39550.1|6|1),INTRON(MODIFIER||||767|LOC_Os02g39550|protein_coding|CODING|LOC_Os02g39550.2|6|1),INTRON(MODIFIER||||742|LOC_Os02g39550|protein_coding|CODING|LOC_Os02g39550.3|6|1) FN3902-S.SNP.2:23890229 chr02:023890229 0 W/23890229-23890229 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.730705;DP=2525;DP4=1210,1218,14,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.3708e-10;MQSB=0.901437;RPB=0.907477;SGB=-14.6908;VDB=0.0954374;EFF=UTR_3_PRIME(MODIFIER||300||456|LOC_Os02g39570|protein_coding|CODING|LOC_Os02g39570.5|11|1),INTRON(MODIFIER||||484|LOC_Os02g39570|protein_coding|CODING|LOC_Os02g39570.1|11|1),INTRON(MODIFIER||||481|LOC_Os02g39570|protein_coding|CODING|LOC_Os02g39570.4|11|1),INTRON(MODIFIER||||323|LOC_Os02g39570|protein_coding|CODING|LOC_Os02g39570.6|9|1) FN934-S.SNP.2:23893405 chr02:023893405 0 W/23893405-23893405 FN934-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN934-S.SNP.2:23893406 chr02:023893406 0 W/23893406-23893406 FN934-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g39590 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN552-S.SNP.2:23896021 chr02:023896021 0 W/23896021-23896021 FN552-S Single Base Substitution C-A INTRON HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2328.SNP.2:23911951 chr02:023911951 0 W/23911951-23911951 FN2328 SNP A -> G AC=2;AN=192;BQB=0.999612;DP=5279;DP4=2537,2448,25,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.49084e-33;MQSB=0.00258563;RPB=0.926364;SGB=12.32;VDB=0.0135832;EFF=INTRON(MODIFIER||||158|LOC_Os02g39630|protein_coding|CODING|LOC_Os02g39630.1|3|1),INTRON(MODIFIER||||158|LOC_Os02g39630|protein_coding|CODING|LOC_Os02g39630.2|3|1),INTRON(MODIFIER||||135|LOC_Os02g39630|protein_coding|CODING|LOC_Os02g39630.3|3|1) FN761-S.SNP.2:23950608 chr02:023950608 0 W/23950608-23950608 FN761-S Single Base Substitution A-G INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN4167-S.SNP.2:23957092 chr02:023957092 0 W/23957092-23957092 FN4167-S SNP C -> T AC=2;AN=170;BQB=0.976575;DP=1598;DP4=975,527,11,3;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.0873e-07;MQSB=0.0015348;RPB=0.965034;SGB=38.3207;VDB=0.205706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.2:23958099 chr02:023958099 0 W/23958099-23958099 FN-172 Single Base Substitution C-G INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1430-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN1430-S Single Base Substitution C-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1619-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN1619-S Single Base Substitution C-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4049-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN4049-S SNP C -> T AC=1;AN=168;BQB=0.964884;DP=2762;DP4=1471,1144,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.7446e-08;MQSB=0.994202;RPB=0.977862;SGB=24.6155;VDB=0.0539049;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.946909;DP=2968;DP4=1532,1344,11,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.22716e-10;MQSB=0.999547;RPB=0.106262;SGB=80.1982;VDB=0.322698;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN673-S Single Base Substitution C-T INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN885-S.SNP.2:23962042 chr02:023962042 0 W/23962042-23962042 FN885-S Single Base Substitution C-T INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3382-S.SNP.2:23972763 chr02:023972763 0 W/23972763-23972763 FN3382-S SNP A -> G AC=1;AN=184;BQB=0.895253;DP=2818;DP4=1239,1481,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08145e-08;MQSB=0.953471;RPB=0.889485;SGB=49.835;VDB=0.321158;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.2:23977420 chr02:023977420 0 W/23977420-23977420 FN4275-S SNP C -> A AC=1;AN=170;BQB=0.993213;DP=2706;DP4=1152,1483,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2019e-11;MQSB=0.972283;RPB=0.808145;SGB=74.528;VDB=0.145516;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.2:23985360 chr02:023985360 0 W/23985360-23985360 FN-158 Single Base Substitution C-A INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1326-S.SNP.2:23987729 chr02:023987729 0 W/23987729-23987729 FN1326-S Single Base Substitution G-A INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN857-S.SNP.2:23993025 chr02:023993025 0 W/23993025-23993025 FN857-S Single Base Substitution A-G INTRON HOMO SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN1374-S.SNP.2:24002827 chr02:024002827 0 W/24002827-24002827 FN1374-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2312.SNP.2:24002827 chr02:024002827 0 W/24002827-24002827 FN2312 SNP G -> A AC=2;AN=192;BQB=0.140509;DP=4851;DP4=2288,2213,17,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.95717e-20;MQSB=0.414201;RPB=0.939813;SGB=80.2009;VDB=0.262549;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T348|392|LOC_Os02g39740|protein_coding|CODING|LOC_Os02g39740.1|3|1) FN4204-S.SNP.2:24002827 chr02:024002827 0 W/24002827-24002827 FN4204-S SNP G -> A AC=2;AN=170;BQB=0.352623;DP=2439;DP4=1120,1211,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.59776e-11;MQSB=0.999855;RPB=0.991;SGB=65.8619;VDB=0.999799;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T348|392|LOC_Os02g39740|protein_coding|CODING|LOC_Os02g39740.1|3|1) FN-37.SNP.2:24008839 chr02:024008839 0 W/24008839-24008839 FN-37 Single Base Substitution T-A INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1348-S.SNP.2:24008839 chr02:024008839 0 W/24008839-24008839 FN1348-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN4137-S.SNP.2:24008839 chr02:024008839 0 W/24008839-24008839 FN4137-S SNP T -> A AC=1;AN=170;BQB=0.963009;DP=2296;DP4=1125,1112,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.00525625;MQSB=0.0271607;RPB=0.969701;SGB=30.1021;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.2:24008839 chr02:024008839 0 W/24008839-24008839 FN762-S Single Base Substitution T-A INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2171-S.SNP.2:24010380 chr02:024010380 0 W/24010380-24010380 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.444949;DP=2632;DP4=1089,1341,140,31;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0402736;MQB=0;MQSB=7.72362e-12;RPB=0.0205423;SGB=-1592.12;VDB=5.04159e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.2:24018353 chr02:024018353 0 W/24018353-24018353 FN1488-S Single Base Substitution T-C INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2797-S.SNP.2:24023275 chr02:024023275 0 W/24023275-24023275 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.998714;DP=3115;DP4=1275,1559,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.27484e-05;MQSB=0.959356;RPB=0.901412;SGB=40.3588;VDB=0.165106;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.2:24024939 chr02:024024939 0 W/24024939-24024939 FN-304 Single Base Substitution C-T INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-136.SNP.2:24025730 chr02:024025730 0 W/24025730-24025730 FN-136 Single Base Substitution G-A INTRON HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3473-S.SNP.2:24033633 chr02:024033633 0 W/24033633-24033633 FN3473-S SNP G -> A AC=2;AN=184;BQB=0.625535;DP=3576;DP4=1854,1562,16,16;HOB=0.0215028;ICB=0.494625;MQ=32;MQ0F=0.0942394;MQB=0.683754;MQSB=9.45013e-12;RPB=0.62613;SGB=139.178;VDB=0.676153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.2:24033710 chr02:024033710 0 W/24033710-24033710 FN3779-S SNP C -> T AC=1;AN=190;BQB=0.985422;DP=3487;DP4=1661,1663,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0510467;MQB=0.699795;MQSB=0.000254137;RPB=0.528689;SGB=68.0854;VDB=0.586267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1698-S.SNP.2:24034448 chr02:024034448 0 W/24034448-24034448 FN1698-S SNP C -> A AC=1;AN=188;BQB=0.813298;DP=2918;DP4=1288,1596,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.0013708;MQB=9.25383e-06;MQSB=0.939977;RPB=1;SGB=35.9843;VDB=0.80974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G1672C|1701|LOC_Os02g39780|protein_coding|CODING|LOC_Os02g39780.1|9|1) FN747-S.SNP.2:24036454 chr02:024036454 0 W/24036454-24036454 FN747-S Single Base Substitution G-A INTRON HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN-74.SNP.2:24044225 chr02:024044225 0 W/24044225-24044225 FN-74 Single Base Substitution T-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2602-S.SNP.2:24049211 chr02:024049211 0 W/24049211-24049211 FN2602-S SNP G -> A AC=2;AN=198;BQB=0.875176;DP=4539;DP4=2081,2238,18,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.71172e-19;MQSB=0.949214;RPB=0.53279;SGB=38.0616;VDB=0.813183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.2:24050699 chr02:024050699 0 W/24050699-24050699 FN1042-S Single Base Substitution T-A INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1042-S.SNP.2:24050700 chr02:024050700 0 W/24050700-24050700 FN1042-S Single Base Substitution T-A INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2683-S.SNP.2:24053515 chr02:024053515 0 W/24053515-24053515 FN2683-S SNP C -> A AC=1;AN=200;BQB=0.906343;DP=4681;DP4=2450,1990,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05548e-12;MQSB=0.74089;RPB=0.946877;SGB=15.9106;VDB=0.319433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.2:24061855 chr02:024061855 0 W/24061855-24061855 FN-215 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g39820 PPR repeat domain containing protein, putative, expressed SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1180-S.SNP.2:24064181 chr02:024064181 0 W/24064181-24064181 FN1180-S Single Base Substitution G-T INTRON HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3357-S.SNP.2:24066718 chr02:024066718 0 W/24066718-24066718 FN3357-S SNP A -> G AC=2;AN=184;BQB=0.996606;DP=2525;DP4=1342,1086,10,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.3569e-09;MQSB=0.741036;RPB=0.999969;SGB=25.7969;VDB=0.544185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.2:24067117 chr02:024067117 0 W/24067117-24067117 FN-250 Single Base Substitution C-A INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1644-S.SNP.2:24069318 chr02:024069318 0 W/24069318-24069318 FN1644-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os02g39840 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN_546-3-1.SNP.2:24069874 chr02:024069874 0 W/24069874-24069874 FN_546-3-1 Single Base Substitution T-G HET LOC_Os02g39840 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2685-S.SNP.2:24077362 chr02:024077362 0 W/24077362-24077362 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.836388;DP=4805;DP4=2129,2373,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23683e-11;MQSB=0.977067;RPB=0.528738;SGB=72.6852;VDB=0.492397;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.2:24077363 chr02:024077363 0 W/24077363-24077363 FN2685-S SNP G -> T AC=1;AN=200;BQB=0.5387;DP=4800;DP4=2054,2443,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45255e-11;MQSB=0.902702;RPB=0.388686;SGB=58.2954;VDB=0.534239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.2:24078799 chr02:024078799 0 W/24078799-24078799 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.675869;DP=4581;DP4=2522,1741,21,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.58008e-10;MQSB=2.85771e-08;RPB=0.945654;SGB=63.0809;VDB=0.320698;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.2:24080306 chr02:024080306 0 W/24080306-24080306 FN-95 Single Base Substitution C-T INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3928-S.SNP.2:24098678 chr02:024098678 0 W/24098678-24098678 FN3928-S SNP C -> T AC=1;AN=158;BQB=0.991344;DP=2355;DP4=1142,1122,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.9367e-09;MQSB=0.960406;RPB=0.295209;SGB=23.8187;VDB=0.181277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A397T|523|LOC_Os02g39884|protein_coding|CODING|LOC_Os02g39884.1|1|1) FN880-S.SNP.2:24099237 chr02:024099237 0 W/24099237-24099237 FN880-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1009-S.SNP.2:24099934 chr02:024099934 0 W/24099934-24099934 FN1009-S Single Base Substitution C-T INTERGENIC HOMO SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN660-S.SNP.2:24115021 chr02:024115021 0 W/24115021-24115021 FN660-S Single Base Substitution T-C INTERGENIC HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1108-S.SNP.2:24121099 chr02:024121099 0 W/24121099-24121099 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3665-S.SNP.2:24122493 chr02:024122493 0 W/24122493-24122493 FN3665-S SNP T -> A AC=2;AN=190;BQB=0.960318;DP=3224;DP4=1618,1419,32,31;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0;MQB=6.93368e-16;MQSB=0.690294;RPB=0.970509;SGB=275.798;VDB=0.0373183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.2:24134808 chr02:024134808 0 W/24134808-24134808 FN1527-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN898-S.SNP.2:24140450 chr02:024140450 0 W/24140450-24140450 FN898-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1527-S.SNP.2:24145902 chr02:024145902 0 W/24145902-24145902 FN1527-S Single Base Substitution C-T INTRON HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN973-S.SNP.2:24151272 chr02:024151272 0 W/24151272-24151272 FN973-S Single Base Substitution A-G INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN-264.SNP.2:24155788 chr02:024155788 0 W/24155788-24155788 FN-264 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g39940 hypothetical protein SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-158.SNP.2:24156846 chr02:024156846 0 W/24156846-24156846 FN-158 Single Base Substitution C-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1735-S.SNP.2:24157771 chr02:024157771 0 W/24157771-24157771 FN1735-S SNP G -> A AC=1;AN=188;BQB=0.107101;DP=3789;DP4=1791,1949,15,23;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.50113e-07;MQSB=3.37756e-07;RPB=0.431812;SGB=-130.661;VDB=0.34412;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.2:24157911 chr02:024157911 0 W/24157911-24157911 FN765-S Single Base Substitution G-T INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1529-S.SNP.2:24162610 chr02:024162610 0 W/24162610-24162610 FN1529-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os02g39950 EF hand family protein, putative, expressed SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN-160.SNP.2:24162637 chr02:024162637 0 W/24162637-24162637 FN-160 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN3489-S.SNP.2:24162637 chr02:024162637 0 W/24162637-24162637 FN3489-S SNP C -> T AC=2;AN=184;BQB=0.455315;DP=2618;DP4=1265,1267,16,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.59685e-11;MQSB=0.953557;RPB=0.734964;SGB=116.569;VDB=0.103715;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N450|460|LOC_Os02g39950|protein_coding|CODING|LOC_Os02g39950.1|8|1|WARNING_TRANSCRIPT_INCOMPLETE) FN884-S.SNP.2:24170870 chr02:024170870 0 W/24170870-24170870 FN884-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN435-S.SNP.2:24172889 chr02:024172889 0 W/24172889-24172889 FN435-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN3670-S.SNP.2:24176680 chr02:024176680 0 W/24176680-24176680 FN3670-S SNP T -> A AC=1;AN=190;BQB=0.82706;DP=2526;DP4=1328,1042,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0;MQB=0.0606674;MQSB=0.626789;RPB=0.772738;SGB=58.2031;VDB=0.214265;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C71S|139|LOC_Os02g39980|protein_coding|CODING|LOC_Os02g39980.1|1|1) FN-231.SNP.2:24181089 chr02:024181089 0 W/24181089-24181089 FN-231 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g39990 expressed protein SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-231.SNP.2:24181090 chr02:024181090 0 W/24181090-24181090 FN-231 Single Base Substitution C-A STOP_GAINED HET LOC_Os02g39990 expressed protein SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2149-S.SNP.2:24183442 chr02:024183442 0 W/24183442-24183442 FN2149-S SNP C -> T AC=1;AN=168;BQB=0.0313087;DP=3883;DP4=1815,2016,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.88339e-05;MQSB=0.995956;RPB=0.868689;SGB=-122.918;VDB=0.85311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.2:24183807 chr02:024183807 0 W/24183807-24183807 FN3372-S SNP C -> G AC=2;AN=184;BQB=0.505874;DP=2641;DP4=1331,1188,13,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.56948e-10;MQSB=0.975297;RPB=0.914456;SGB=14.4113;VDB=0.809032;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.2:24206445 chr02:024206445 0 W/24206445-24206445 FN-151 Single Base Substitution G-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN-286.SNP.2:24209135 chr02:024209135 0 W/24209135-24209135 FN-286 Single Base Substitution G-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3629-S.SNP.2:24213063 chr02:024213063 0 W/24213063-24213063 FN3629-S SNP A -> G AC=1;AN=190;BQB=0.939547;DP=2631;DP4=1150,1398,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59772e-05;MQSB=0.891774;RPB=0.575448;SGB=30.8803;VDB=0.440716;EFF=INTERGENIC(MODIFIER||||||||||1) FN-139.SNP.2:24215014 chr02:024215014 0 W/24215014-24215014 FN-139 Single Base Substitution G-A INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN-139.SNP.2:24215015 chr02:024215015 0 W/24215015-24215015 FN-139 Single Base Substitution C-A INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN517-S.SNP.2:24216199 chr02:024216199 0 W/24216199-24216199 FN517-S Single Base Substitution A-G INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN1086-S.SNP.2:24218704 chr02:024218704 0 W/24218704-24218704 FN1086-S Single Base Substitution T-C INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-399.SNP.2:24221230 chr02:024221230 0 W/24221230-24221230 FN-399 Single Base Substitution T-G INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.2:24221230 chr02:024221230 0 W/24221230-24221230 FN399-S Single Base Substitution T-G INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1376-S.SNP.2:24225047 chr02:024225047 0 W/24225047-24225047 FN1376-S Single Base Substitution G-T INTRON HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN973-S.SNP.2:24234525 chr02:024234525 0 W/24234525-24234525 FN973-S Single Base Substitution A-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN-375.SNP.2:24237891 chr02:024237891 0 W/24237891-24237891 FN-375 Single Base Substitution T-C INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN4272-S.SNP.2:24239581 chr02:024239581 0 W/24239581-24239581 FN4272-S SNP G -> A AC=1;AN=170;BQB=1;DP=2440;DP4=1177,1194,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=3.5048e-11;MQSB=0.00029202;RPB=0.40822;SGB=55.5339;VDB=0.340765;EFF=UTR_3_PRIME(MODIFIER||1030||277|LOC_Os02g40030|protein_coding|CODING|LOC_Os02g40030.2|8|1),UTR_3_PRIME(MODIFIER||35||346|LOC_Os02g40030|protein_coding|CODING|LOC_Os02g40030.1|10|1) FN497-S.SNP.2:24242129 chr02:024242129 0 W/24242129-24242129 FN497-S Single Base Substitution T-A INTRON HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1641-S.SNP.2:24243541 chr02:024243541 0 W/24243541-24243541 FN1641-S Single Base Substitution G-C INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3639-S.SNP.2:24248633 chr02:024248633 0 W/24248633-24248633 FN3639-S SNP C -> T AC=1;AN=190;BQB=0.763774;DP=3076;DP4=1209,1702,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000975293;MQB=5.55647e-05;MQSB=0.000372185;RPB=0.949927;SGB=71.8647;VDB=0.44693;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.2:24252623 chr02:024252623 0 W/24252623-24252623 FN_789-2-1 Single Base Substitution T-A HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-3-1.SNP.2:24252623 chr02:024252623 0 W/24252623-24252623 FN_789-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN391-S.SNP.2:24252908 chr02:024252908 0 W/24252908-24252908 FN391-S Single Base Substitution A-T INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN555-S.SNP.2:24276457 chr02:024276457 0 W/24276457-24276457 FN555-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1536-S.SNP.2:24374419 chr02:024374419 0 W/24374419-24374419 FN1536-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3740-S.SNP.2:24385641 chr02:024385641 0 W/24385641-24385641 FN3740-S SNP C -> G AC=1;AN=190;BQB=0.999787;DP=3245;DP4=1316,1798,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.000591808;MQSB=4.18573e-07;RPB=0.714616;SGB=76.4186;VDB=0.110461;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.2:24446755 chr02:024446755 0 W/24446755-24446755 FN963-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g40360 retrotransposon protein, putative, unclassified, expressed SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN1275-S.SNP.2:24481312 chr02:024481312 0 W/24481312-24481312 FN1275-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2358.SNP.2:24487923 chr02:024487923 0 W/24487923-24487923 FN2358 SNP C -> A AC=1;AN=192;BQB=0.628037;DP=4711;DP4=2283,2027,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000212269;MQB=4.62509e-09;MQSB=0.68257;RPB=0.955413;SGB=2.66176;VDB=0.952373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.2:24501257 chr02:024501257 0 W/24501257-24501257 FN1075-S Single Base Substitution C-T INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1353-S.SNP.2:24509541 chr02:024509541 0 W/24509541-24509541 FN1353-S Single Base Substitution C-A INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1384-S.SNP.2:24514837 chr02:024514837 0 W/24514837-24514837 FN1384-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2668-S.SNP.2:24514837 chr02:024514837 0 W/24514837-24514837 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.540651;DP=5284;DP4=2773,2199,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000189251;MQB=1.51142e-16;MQSB=0.89646;RPB=0.678793;SGB=123.342;VDB=0.588519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.2:24514837 chr02:024514837 0 W/24514837-24514837 FN3064-S SNP C -> T AC=2;AN=184;BQB=0.999871;DP=2954;DP4=1594,1243,10,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.23281e-13;MQSB=0.983424;RPB=0.931108;SGB=38.4058;VDB=0.903936;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.2:24514837 chr02:024514837 0 W/24514837-24514837 FN4109-S SNP C -> T AC=2;AN=182;BQB=0.999716;DP=2870;DP4=1560,1218,16,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.57619e-13;MQSB=0.96433;RPB=0.958832;SGB=98.2417;VDB=0.977701;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.2:24514837 chr02:024514837 0 W/24514837-24514837 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN4271-S.SNP.2:24515890 chr02:024515890 0 W/24515890-24515890 FN4271-S SNP C -> T AC=1;AN=170;BQB=0.993747;DP=2484;DP4=1210,1200,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.49471e-05;MQSB=0.901385;RPB=0.92461;SGB=25.6601;VDB=0.6902;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.2:24515894 chr02:024515894 0 W/24515894-24515894 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.935995;DP=2493;DP4=1228,1197,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000168723;MQSB=0.864878;RPB=0.99993;SGB=30.1021;VDB=0.878874;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.2:24560322 chr02:024560322 0 W/24560322-24560322 FN799-S Single Base Substitution T-G INTRON HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN2678-S.SNP.2:24560970 chr02:024560970 0 W/24560970-24560970 FN2678-S SNP C -> A AC=1;AN=200;BQB=0.746777;DP=4446;DP4=2056,2087,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60355e-06;MQSB=0.294325;RPB=0.607338;SGB=40.4492;VDB=0.89913;EFF=INTRON(MODIFIER||||148|LOC_Os02g40490|protein_coding|CODING|LOC_Os02g40490.1|1|1) FN3632-S.SNP.2:24575787 chr02:024575787 0 W/24575787-24575787 FN3632-S SNP G -> A AC=2;AN=190;BQB=0.973592;DP=2634;DP4=1344,1167,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000379651;MQB=4.08908e-15;MQSB=0.831655;RPB=0.679695;SGB=121.957;VDB=0.621182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.2:24576746 chr02:024576746 0 W/24576746-24576746 FN1460-S Single Base Substitution A-G INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN540-S.SNP.2:24584662 chr02:024584662 0 W/24584662-24584662 FN540-S Single Base Substitution C-T INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN464-S.SNP.2:24590447 chr02:024590447 0 W/24590447-24590447 FN464-S Single Base Substitution T-C INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3383-S.SNP.2:24640684 chr02:024640684 0 W/24640684-24640684 FN3383-S SNP A -> T AC=1;AN=184;BQB=0.469275;DP=2783;DP4=1428,1219,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000571985;MQSB=0.974328;RPB=0.953714;SGB=28.7043;VDB=0.825615;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.2:24641239 chr02:024641239 0 W/24641239-24641239 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.966582;DP=2980;DP4=1962,913,20,2;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0;MQB=0.0174508;MQSB=8.33239e-06;RPB=0.224755;SGB=94.6341;VDB=0.174914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.2:24654462 chr02:024654462 0 W/24654462-24654462 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.319028;DP=4144;DP4=1909,1955,19,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.06013e-20;MQSB=0.999851;RPB=0.658726;SGB=122.837;VDB=0.35077;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.2:24656822 chr02:024656822 0 W/24656822-24656822 FN874-S Single Base Substitution A-C INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN927-S.SNP.2:24660347 chr02:024660347 0 W/24660347-24660347 FN927-S Single Base Substitution G-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1258-S.SNP.2:24662479 chr02:024662479 0 W/24662479-24662479 FN1258-S Single Base Substitution C-A INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN-226.SNP.2:24665400 chr02:024665400 0 W/24665400-24665400 FN-226 Single Base Substitution T-C INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3388-S.SNP.2:24671328 chr02:024671328 0 W/24671328-24671328 FN3388-S SNP C -> T AC=2;AN=184;BQB=0.274473;DP=2740;DP4=1238,1392,12,9;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=0.00237506;MQSB=0.00176287;RPB=0.101752;SGB=89.4385;VDB=0.288873;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P32|127|LOC_Os02g40690|protein_coding|CODING|LOC_Os02g40690.1|1|1) FN1585-S.SNP.2:24675030 chr02:024675030 0 W/24675030-24675030 FN1585-S Single Base Substitution C-T INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-249.SNP.2:24696815 chr02:024696815 0 W/24696815-24696815 FN-249 Single Base Substitution C-T INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-249.SNP.2:24696816 chr02:024696816 0 W/24696816-24696816 FN-249 Single Base Substitution A-T INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN2415.SNP.2:24699440 chr02:024699440 0 W/24699440-24699440 FN2415 SNP T -> C AC=2;AN=200;BQB=0.96615;DP=4514;DP4=1890,2213,21,14;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0;MQB=3.53725e-08;MQSB=0.43364;RPB=0.0619778;SGB=76.378;VDB=0.618976;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.2:24700764 chr02:024700764 0 W/24700764-24700764 FN771-S Single Base Substitution C-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN3579-S.SNP.2:24700971 chr02:024700971 0 W/24700971-24700971 FN3579-S SNP C -> A AC=1;AN=188;BQB=0.936469;DP=3880;DP4=2376,1430,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=9.86536e-05;MQSB=0.000143392;RPB=0.360469;SGB=43.0708;VDB=0.307983;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.2:24702758 chr02:024702758 0 W/24702758-24702758 FN-186 Single Base Substitution C-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-152.SNP.2:24707425 chr02:024707425 0 W/24707425-24707425 FN-152 Single Base Substitution A-G INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN2734-S.SNP.2:24718898 chr02:024718898 0 W/24718898-24718898 FN2734-S SNP G -> C AC=1;AN=200;BQB=0.709896;DP=5192;DP4=2265,2669,7,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.50679e-06;MQSB=0.00375223;RPB=0.905815;SGB=77.2904;VDB=0.0586869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L538V|619|LOC_Os02g40784|protein_coding|CODING|LOC_Os02g40784.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L503V|584|LOC_Os02g40784|protein_coding|CODING|LOC_Os02g40784.3|9|1) FN3770-S.SNP.2:24720191 chr02:024720191 0 W/24720191-24720191 FN3770-S SNP T -> C AC=2;AN=190;BQB=0.999992;DP=2685;DP4=1261,1263,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.10449e-12;MQSB=0.802814;RPB=0.0828633;SGB=85.8548;VDB=0.204457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S322G|619|LOC_Os02g40784|protein_coding|CODING|LOC_Os02g40784.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S322G|584|LOC_Os02g40784|protein_coding|CODING|LOC_Os02g40784.3|5|1) FN465-S.SNP.2:24727078 chr02:024727078 0 W/24727078-24727078 FN465-S Single Base Substitution G-T INTERGENIC HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN804-S.SNP.2:24728373 chr02:024728373 0 W/24728373-24728373 FN804-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2419.SNP.2:24730644 chr02:024730644 0 W/24730644-24730644 FN2419 SNP T -> G AC=1;AN=200;BQB=0.333714;DP=4743;DP4=2148,2315,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.30148e-12;MQSB=0.810071;RPB=0.656886;SGB=65.5058;VDB=0.839736;EFF=INTRON(MODIFIER||||408|LOC_Os02g40810|protein_coding|CODING|LOC_Os02g40810.1|5|1) FN2147-S.SNP.2:24734415 chr02:024734415 0 W/24734415-24734415 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.000597306;DP=4125;DP4=1904,2166,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.32573e-08;MQSB=0.894912;RPB=0.461605;SGB=-315.878;VDB=0.275067;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.2:24752663 chr02:024752663 0 W/24752663-24752663 FN661-S Single Base Substitution C-A INTRON HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2254-S.SNP.2:24757305 chr02:024757305 0 W/24757305-24757305 FN2254-S SNP T -> G AC=1;AN=190;BQB=0.259291;DP=3997;DP4=1561,2002,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000250188;MQB=1.154e-09;MQSB=1.32228e-08;RPB=0.59748;SGB=80.9724;VDB=0.461932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.2:24762279 chr02:024762279 0 W/24762279-24762279 FN1372-S Single Base Substitution G-A INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2285.SNP.2:24765575 chr02:024765575 0 W/24765575-24765575 FN2285 SNP T -> A AC=1;AN=192;BQB=0.856994;DP=5019;DP4=2266,2121,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0203228;MQB=0.0385901;MQSB=7.31629e-39;RPB=0.999004;SGB=-37.0704;VDB=0.622148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.2:24771177 chr02:024771177 0 W/24771177-24771177 FN1121-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g40860 CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.2:24779451 chr02:024779451 0 W/24779451-24779451 FN1121-S Single Base Substitution A-C INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3555-S.SNP.2:24780058 chr02:024780058 0 W/24780058-24780058 FN3555-S SNP G -> C AC=1;AN=188;BQB=0.991164;DP=2916;DP4=1268,1562,17,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.00848e-17;MQSB=0.983747;RPB=0.520901;SGB=144.388;VDB=0.89544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.2:24787000 chr02:024787000 0 W/24787000-24787000 FN2219-S SNP G -> T AC=1;AN=190;BQB=0.965516;DP=4416;DP4=1898,2284,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31484e-09;MQSB=0.680187;RPB=0.999508;SGB=53.8699;VDB=0.573824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.2:24797048 chr02:024797048 0 W/24797048-24797048 FN2398 SNP G -> C AC=1;AN=200;BQB=0.821323;DP=3789;DP4=1687,1871,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00105569;MQB=1.55535e-05;MQSB=0.999957;RPB=0.974168;SGB=16.4591;VDB=0.093562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R466T|876|LOC_Os02g40920|protein_coding|CODING|LOC_Os02g40920.1|4|1) FN2676-S.SNP.2:24802183 chr02:024802183 0 W/24802183-24802183 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.995981;DP=4779;DP4=2234,2246,8,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0207156;MQB=0.2524;MQSB=0.000291846;RPB=0.844809;SGB=40.2696;VDB=0.987048;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W161*|634|LOC_Os02g40930|protein_coding|CODING|LOC_Os02g40930.1|2|1);LOF=(LOC_Os02g40930|LOC_Os02g40930|1|1.00);NMD=(LOC_Os02g40930|LOC_Os02g40930|1|1.00) FN4247-S.SNP.2:24806907 chr02:024806907 0 W/24806907-24806907 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.979082;DP=2252;DP4=1006,1177,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.56318e-07;MQSB=0.000816455;RPB=0.865048;SGB=38.3207;VDB=0.744912;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.2:24817503 chr02:024817503 0 W/24817503-24817503 FN2649-S SNP A -> G AC=2;AN=200;BQB=0.44806;DP=4982;DP4=2452,2199,26,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.12595e-33;MQSB=0.996076;RPB=0.362294;SGB=279.918;VDB=0.752753;EFF=INTRON(MODIFIER||||252|LOC_Os02g41450|protein_coding|CODING|LOC_Os02g41450.1|1|1) FN903-S.SNP.2:24831538 chr02:024831538 0 W/24831538-24831538 FN903-S Single Base Substitution C-T INTRON HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN3510-S.SNP.2:24835023 chr02:024835023 0 W/24835023-24835023 FN3510-S SNP G -> A AC=2;AN=188;BQB=0.980953;DP=2826;DP4=1258,1414,21,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.52084e-16;MQSB=0.996462;RPB=0.820723;SGB=144.388;VDB=0.123106;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.2:24835038 chr02:024835038 0 W/24835038-24835038 FN2602-S SNP T -> G AC=2;AN=198;BQB=0.763885;DP=4358;DP4=1979,2125,14,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.73807e-17;MQSB=0.430618;RPB=0.726102;SGB=104.861;VDB=0.0958996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-197.SNP.2:24859198 chr02:024859198 0 W/24859198-24859198 FN-197 Single Base Substitution G-A INTRON HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN971-S.SNP.2:24863934 chr02:024863934 0 W/24863934-24863934 FN971-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1072-S.SNP.2:24874526 chr02:024874526 0 W/24874526-24874526 FN1072-S Single Base Substitution G-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1299-S.SNP.2:24877643 chr02:024877643 0 W/24877643-24877643 FN1299-S Single Base Substitution G-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1116-S.SNP.2:24888028 chr02:024888028 0 W/24888028-24888028 FN1116-S Single Base Substitution A-C INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3990-S.SNP.2:24889471 chr02:024889471 0 W/24889471-24889471 FN3990-S SNP G -> C AC=1;AN=168;BQB=0.793974;DP=2113;DP4=1122,902,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000473261;MQB=6.74645e-11;MQSB=0.986119;RPB=0.977664;SGB=78.7577;VDB=0.716542;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.2:24891965 chr02:024891965 0 W/24891965-24891965 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.869255;DP=1980;DP4=781,1115,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53711e-05;MQSB=0.194001;RPB=0.997777;SGB=43.4296;VDB=0.978067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.2:24893085 chr02:024893085 0 W/24893085-24893085 FN2564-S SNP C -> A AC=1;AN=198;BQB=0.778489;DP=4121;DP4=2113,1816,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000745284;MQSB=0.791501;RPB=0.894287;SGB=22.1736;VDB=0.472523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.2:24895685 chr02:024895685 0 W/24895685-24895685 FN1456-S Single Base Substitution G-A INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN4204-S.SNP.2:24896006 chr02:024896006 0 W/24896006-24896006 FN4204-S SNP A -> G AC=1;AN=170;BQB=0.983334;DP=2448;DP4=1211,1133,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.60045e-07;MQSB=0.930543;RPB=0.96732;SGB=27.9928;VDB=0.897191;EFF=INTERGENIC(MODIFIER||||||||||1) FN-63.SNP.2:24900127 chr02:024900127 0 W/24900127-24900127 FN-63 Single Base Substitution A-T INTRON HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2794-S.SNP.2:24900306 chr02:024900306 0 W/24900306-24900306 FN2794-S SNP T -> A AC=1;AN=198;BQB=0.747068;DP=3948;DP4=2024,1693,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01307e-12;MQSB=0.715237;RPB=0.79259;SGB=17.325;VDB=0.243028;EFF=INTRON(MODIFIER||||547|LOC_Os02g41520|protein_coding|CODING|LOC_Os02g41520.1|1|1) FN-20.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN-20 Single Base Substitution C-T INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1754-S.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN1754-S SNP C -> T AC=2;AN=188;BQB=0.903449;DP=3636;DP4=1299,2292,16,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.1215e-13;MQSB=0.314057;RPB=0.130944;SGB=-6.85034;VDB=0.582793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN2323 SNP C -> T AC=2;AN=192;BQB=0.717845;DP=5632;DP4=2278,2971,40,42;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.60372e-41;MQSB=0.355525;RPB=0.430732;SGB=-150.64;VDB=0.388705;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN3354-S SNP C -> T AC=2;AN=184;BQB=0.470106;DP=3663;DP4=1780,1739,15,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.26405e-13;MQSB=0.665222;RPB=0.755495;SGB=106.184;VDB=0.721309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.568285;DP=3349;DP4=1602,1651,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31079e-08;MQSB=0.20107;RPB=0.929535;SGB=53.7007;VDB=0.77062;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.2:24906512 chr02:024906512 0 W/24906512-24906512 FN496-S Single Base Substitution C-T INTERGENIC HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3832-S.SNP.2:24907787 chr02:024907787 0 W/24907787-24907787 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.567848;DP=2654;DP4=1149,1397,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37755e-05;MQSB=0.436867;RPB=0.776182;SGB=32.5467;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.2:24908678 chr02:024908678 0 W/24908678-24908678 FN2532-S SNP A -> G AC=1;AN=198;BQB=0.0626877;DP=3605;DP4=1486,1873,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.90529e-05;MQSB=0.621012;RPB=0.985249;SGB=18.9639;VDB=0.813613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.2:24909342 chr02:024909342 0 W/24909342-24909342 FN1635-S SNP A -> G AC=1;AN=188;BQB=0.280288;DP=1632;DP4=1048,565,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.9252e-05;MQSB=0.731552;RPB=0.522883;SGB=-3.72151;VDB=0.140618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.2:24910501 chr02:024910501 0 W/24910501-24910501 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.201693;DP=3771;DP4=1739,1902,10,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.5919e-11;MQSB=0.972174;RPB=0.248927;SGB=107.526;VDB=0.328343;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.2:24912223 chr02:024912223 0 W/24912223-24912223 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.691532;DP=2539;DP4=1261,1198,13,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.17634e-12;MQSB=0.962005;RPB=0.924219;SGB=105.627;VDB=0.646769;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.2:24912223 chr02:024912223 0 W/24912223-24912223 FN601-S Single Base Substitution G-A INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3368-S.SNP.2:24916474 chr02:024916474 0 W/24916474-24916474 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.987776;DP=2964;DP4=1431,1442,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.58803e-10;MQSB=0.804148;RPB=0.426927;SGB=71.3514;VDB=0.206799;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I17|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.3|1|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I17|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I17|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I17|671|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.4|2|1) FN4119-S.SNP.2:24918892 chr02:024918892 0 W/24918892-24918892 FN4119-S SNP T -> G AC=2;AN=182;BQB=0.666926;DP=2888;DP4=1307,1501,13,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.42921e-12;MQSB=0.805977;RPB=0.673683;SGB=70.7363;VDB=0.0875227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W349G|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W349G|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W349G|651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W349G|671|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.4|4|1) FN3400-S.SNP.2:24919794 chr02:024919794 0 W/24919794-24919794 FN3400-S SNP A -> T AC=2;AN=184;BQB=0.945881;DP=2968;DP4=1416,1461,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.72025e-13;MQSB=0.987318;RPB=0.998867;SGB=84.9167;VDB=0.901679;EFF=INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.1|4|1),INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.2|4|1),INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.3|3|1),INTRON(MODIFIER||||671|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.4|4|1) FN3496-S.SNP.2:24920987 chr02:024920987 0 W/24920987-24920987 FN3496-S SNP C -> T AC=1;AN=188;BQB=0.980067;DP=2774;DP4=1233,1455,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.32919e-06;MQSB=0.985947;RPB=0.859067;SGB=35.3493;VDB=0.779918;EFF=SPLICE_SITE_REGION(LOW||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.1|5|1),SPLICE_SITE_REGION(LOW||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.2|5|1),SPLICE_SITE_REGION(LOW||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S633|671|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.4|5|1),INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.1|5|1),INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.2|5|1),INTRON(MODIFIER||||651|LOC_Os02g41550|protein_coding|CODING|LOC_Os02g41550.3|4|1) FN882-S.SNP.2:24922212 chr02:024922212 0 W/24922212-24922212 FN882-S Single Base Substitution A-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2177-S.SNP.2:24924695 chr02:024924695 0 W/24924695-24924695 FN2177-S SNP G -> C AC=1;AN=168;BQB=0.0933174;DP=2241;DP4=1072,1122,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00139266;MQSB=0.976282;RPB=0.971645;SGB=4.1907;VDB=0.694045;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acC|T276|493|LOC_Os02g41560|protein_coding|CODING|LOC_Os02g41560.1|1|1) FN2155-S.SNP.2:24930662 chr02:024930662 0 W/24930662-24930662 FN2155-S SNP A -> G AC=1;AN=168;BQB=0.165487;DP=2727;DP4=2098,581,17,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.52798e-05;MQSB=0.989819;RPB=0.875221;SGB=-82.6471;VDB=0.0438859;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.2:24930721 chr02:024930721 0 W/24930721-24930721 FN973-S Single Base Substitution T-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2104-S.SNP.2:24934634 chr02:024934634 0 W/24934634-24934634 FN2104-S SNP T -> C AC=2;AN=168;BQB=0.746989;DP=3881;DP4=1618,2229,14,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.68951e-11;MQSB=0.952385;RPB=0.75454;SGB=17.068;VDB=0.871754;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.2:24935516 chr02:024935516 0 W/24935516-24935516 FN784-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g41580 CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2665-S.SNP.2:24936651 chr02:024936651 0 W/24936651-24936651 FN2665-S SNP T -> A AC=1;AN=200;BQB=0.981484;DP=5035;DP4=2296,2544,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.65349e-08;MQSB=0.842062;RPB=0.637851;SGB=33.0593;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.2:24938926 chr02:024938926 0 W/24938926-24938926 FN918-S Single Base Substitution A-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN918-S.SNP.2:24938927 chr02:024938927 0 W/24938927-24938927 FN918-S Single Base Substitution G-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3462-S.SNP.2:24939122 chr02:024939122 0 W/24939122-24939122 FN3462-S SNP G -> T AC=2;AN=184;BQB=0.924499;DP=1174;DP4=725,403,5,5;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=7.54121e-05;MQSB=6.51109e-05;RPB=0.574746;SGB=39.699;VDB=0.0122151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-S.SNP.2:24942021 chr02:024942021 0 W/24942021-24942021 FN1554-S Single Base Substitution C-T INTRON HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2599-S.SNP.2:24947848 chr02:024947848 0 W/24947848-24947848 FN2599-S SNP T -> C AC=1;AN=198;BQB=0.097177;DP=3902;DP4=1733,1907,19,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.19988e-10;MQSB=0.921172;RPB=0.343454;SGB=79.6954;VDB=0.331489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.2:24952292 chr02:024952292 0 W/24952292-24952292 FN3990-S SNP G -> C AC=1;AN=168;BQB=0.999573;DP=2719;DP4=1316,1286,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.73329e-07;MQSB=0.808487;RPB=0.963599;SGB=51.902;VDB=0.214995;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.2:24952292 chr02:024952292 0 W/24952292-24952292 FN594-S Single Base Substitution G-C INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3774-S.SNP.2:24961365 chr02:024961365 0 W/24961365-24961365 FN3774-S SNP C -> A AC=1;AN=190;BQB=0.801576;DP=3084;DP4=1679,1292,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.9026e-13;MQSB=0.975184;RPB=0.862263;SGB=85.5263;VDB=0.0141377;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.2:24962782 chr02:024962782 0 W/24962782-24962782 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.975114;DP=3644;DP4=1509,2023,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.10472e-13;MQSB=0.91735;RPB=0.999946;SGB=70.9657;VDB=0.404757;EFF=INTRON(MODIFIER||||50|LOC_Os02g41620|protein_coding|CODING|LOC_Os02g41620.1|1|1) FN1263-S.SNP.2:24964598 chr02:024964598 0 W/24964598-24964598 FN1263-S Single Base Substitution G-A INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1136-19-S.SNP.2:24965518 chr02:024965518 0 W/24965518-24965518 FN1136-19-S Single Base Substitution A-G INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2259-S.SNP.2:24972938 chr02:024972938 0 W/24972938-24972938 FN2259-S SNP A -> T AC=1;AN=190;BQB=0.514238;DP=4818;DP4=1907,2499,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46774e-06;MQSB=0.920823;RPB=0.904867;SGB=32.5467;VDB=0.261515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.2:24972938 chr02:024972938 0 W/24972938-24972938 FN3316-S SNP A -> T AC=2;AN=184;BQB=0.794736;DP=2801;DP4=1219,1452,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.86705e-11;MQSB=0.951191;RPB=0.895677;SGB=78.0093;VDB=0.250608;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.2:24972938 chr02:024972938 0 W/24972938-24972938 FN718-S Single Base Substitution A-T INTERGENIC HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN974-S.SNP.2:24972938 chr02:024972938 0 W/24972938-24972938 FN974-S Single Base Substitution A-T INTERGENIC HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. W721-2-1.SNP.2:24992344 chr02:024992344 0 W/24992344-24992344 W721-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3656-S.SNP.2:24992930 chr02:024992930 0 W/24992930-24992930 FN3656-S SNP A -> G AC=1;AN=190;BQB=0.999865;DP=3053;DP4=1405,1479,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98967e-06;MQSB=0.999952;RPB=0.991242;SGB=28.9929;VDB=0.0607471;EFF=UTR_3_PRIME(MODIFIER||200||713|LOC_Os02g41670|protein_coding|CODING|LOC_Os02g41670.1|1|1) FN2370.SNP.2:25000221 chr02:025000221 0 W/25000221-25000221 FN2370 SNP A -> T AC=2;AN=192;BQB=0.215408;DP=4650;DP4=2007,1624,32,12;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.000860215;MQB=1.77952e-13;MQSB=5.95387e-36;RPB=0.95381;SGB=-96.0852;VDB=0.781889;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.2:25002109 chr02:025002109 0 W/25002109-25002109 FN885-S Single Base Substitution C-T INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3394-S.SNP.2:25002959 chr02:025002959 0 W/25002959-25002959 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.978692;DP=4087;DP4=1896,1989,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0185955;MQB=1.08698e-05;MQSB=0.515318;RPB=0.983172;SGB=93.9603;VDB=0.163245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.2:25016460 chr02:025016460 0 W/25016460-25016460 FN2675-S SNP C -> T AC=1;AN=200;BQB=0.775416;DP=4484;DP4=2165,2140,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96545e-09;MQSB=0.92066;RPB=0.488037;SGB=68.0801;VDB=0.380753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.2:25016812 chr02:025016812 0 W/25016812-25016812 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.734407;DP=4492;DP4=2170,1989,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.9774e-13;MQSB=0.98976;RPB=0.662144;SGB=50.1053;VDB=0.661984;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.2:25018184 chr02:025018184 0 W/25018184-25018184 FN3903-S SNP T -> C AC=1;AN=158;BQB=0.999954;DP=2729;DP4=1476,1170,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0227189;MQB=0.0180838;MQSB=0.904428;RPB=0.490536;SGB=40.8124;VDB=0.539005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.2:25019000 chr02:025019000 0 W/25019000-25019000 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.306532;DP=3015;DP4=1174,1816,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0252073;MQB=0.299179;MQSB=1.1198e-24;RPB=0.6307;SGB=17.3231;VDB=0.977516;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.2:25019661 chr02:025019661 0 W/25019661-25019661 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1073-S.SNP.2:25021312 chr02:025021312 0 W/25021312-25021312 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN-166.SNP.2:25022007 chr02:025022007 0 W/25022007-25022007 FN-166 Single Base Substitution C-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-166.SNP.2:25022513 chr02:025022513 0 W/25022513-25022513 FN-166 Single Base Substitution A-C INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2544-S.SNP.2:25024353 chr02:025024353 0 W/25024353-25024353 FN2544-S SNP G -> T AC=2;AN=198;BQB=0.0173738;DP=3480;DP4=1601,1659,9,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000862069;MQB=3.07931e-10;MQSB=0.870853;RPB=0.952617;SGB=76.1002;VDB=0.234509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.2:25026307 chr02:025026307 0 W/25026307-25026307 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.892253;DP=5527;DP4=3085,2111,14,5;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.113624;MQB=0.0509324;MQSB=0;RPB=0.875296;SGB=58.2954;VDB=0.361008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.2:25038266 chr02:025038266 0 W/25038266-25038266 FN2140-S SNP C -> G AC=1;AN=168;BQB=0.18269;DP=2612;DP4=1139,1419,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00574273;MQB=1.87579e-09;MQSB=0.271783;RPB=0.487665;SGB=-13.2184;VDB=0.310707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E579D|615|LOC_Os02g41702|protein_coding|CODING|LOC_Os02g41702.1|3|1) FN3563-S.SNP.2:25040427 chr02:025040427 0 W/25040427-25040427 FN3563-S SNP G -> A AC=1;AN=188;BQB=0.9893;DP=2866;DP4=1430,1369,3,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4799e-09;MQSB=0.35574;RPB=0.573224;SGB=46.6141;VDB=0.840515;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.2:25041584 chr02:025041584 0 W/25041584-25041584 FN598-S Single Base Substitution A-T INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN4122-S.SNP.2:25044580 chr02:025044580 0 W/25044580-25044580 FN4122-S SNP C -> T AC=2;AN=182;BQB=0.970462;DP=3050;DP4=1422,1541,16,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.83173e-14;MQSB=0.821123;RPB=0.821991;SGB=116.285;VDB=0.85958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.2:25062878 chr02:025062878 0 W/25062878-25062878 FN3308-S SNP C -> G AC=1;AN=184;BQB=0.999831;DP=4293;DP4=1499,2577,14,23;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.73476e-19;MQSB=0.924364;RPB=0.560059;SGB=-4.27824;VDB=0.362848;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.2:25063206 chr02:025063206 0 W/25063206-25063206 FN4010-S SNP G -> A AC=1;AN=168;BQB=0.313395;DP=2820;DP4=1202,1493,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46675e-08;MQSB=0.996999;RPB=0.399392;SGB=8.48315;VDB=0.846307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.2:25064353 chr02:025064353 0 W/25064353-25064353 FN1553-S Single Base Substitution G-T INTERGENIC Homo SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN1553-S.SNP.2:25064354 chr02:025064354 0 W/25064354-25064354 FN1553-S Single Base Substitution G-T INTERGENIC Homo SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN1000-S.SNP.2:25065686 chr02:025065686 0 W/25065686-25065686 FN1000-S Single Base Substitution A-G INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3815-S.SNP.2:25066375 chr02:025066375 0 W/25066375-25066375 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.785678;DP=2596;DP4=1226,1277,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.31869e-07;MQSB=0.991704;RPB=0.987308;SGB=25.439;VDB=0.146496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.2:25066393 chr02:025066393 0 W/25066393-25066393 FN2249-S SNP A -> G AC=1;AN=190;BQB=0.609449;DP=4777;DP4=2155,2174,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209336;MQB=3.99727e-08;MQSB=0.194808;RPB=0.402438;SGB=80.9724;VDB=0.415109;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.2:25068168 chr02:025068168 0 W/25068168-25068168 FN3540-S SNP T -> G AC=1;AN=188;BQB=0.764395;DP=2600;DP4=1244,1241,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.51644e-08;MQSB=0.989723;RPB=0.880548;SGB=31.1628;VDB=0.632406;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.2:25068361 chr02:025068361 0 W/25068361-25068361 FN3902-S SNP C -> G AC=1;AN=158;BQB=0.979428;DP=2314;DP4=1148,1091,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000276023;MQSB=0.944629;RPB=0.994379;SGB=29.5899;VDB=0.748002;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.2:25070043 chr02:025070043 0 W/25070043-25070043 FN742-S Single Base Substitution G-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3548-S.SNP.2:25071152 chr02:025071152 0 W/25071152-25071152 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.963465;DP=2588;DP4=1377,1151,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.55386e-06;MQSB=0.975107;RPB=0.993908;SGB=35.3493;VDB=0.584965;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.2:25080617 chr02:025080617 0 W/25080617-25080617 FN413-S Single Base Substitution G-A INTRON HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2290.SNP.2:25089338 chr02:025089338 0 W/25089338-25089338 FN2290 SNP G -> C AC=2;AN=192;BQB=0.289156;DP=4401;DP4=1820,1997,28,36;HOB=0.0206163;ICB=0.494846;MQ=35;MQ0F=0.115656;MQB=0.757688;MQSB=2.25609e-43;RPB=0.477559;SGB=244.448;VDB=0.373926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.2:25092098 chr02:025092098 0 W/25092098-25092098 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.987315;DP=2554;DP4=1309,1146,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.018011;MQB=0.0513091;MQSB=0.000360092;RPB=0.903413;SGB=28.9929;VDB=0.944131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.2:25092697 chr02:025092697 0 W/25092697-25092697 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.270081;DP=3911;DP4=1912,1804,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000511378;MQB=1.49307e-07;MQSB=0.719828;RPB=0.961933;SGB=2.96892;VDB=0.285528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R55H|1460|LOC_Os02g41740|protein_coding|CODING|LOC_Os02g41740.1|1|1) FN2113-S.SNP.2:25096060 chr02:025096060 0 W/25096060-25096060 FN2113-S SNP G -> C AC=1;AN=168;BQB=0.527479;DP=3378;DP4=1569,1772,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.12907;MQB=0.864105;MQSB=0.66411;RPB=0.92073;SGB=-12.3568;VDB=0.370941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K1133N|1460|LOC_Os02g41740|protein_coding|CODING|LOC_Os02g41740.1|2|1) FN492-S.SNP.2:25097589 chr02:025097589 0 W/25097589-25097589 FN492-S Single Base Substitution G-T INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN427-S.SNP.2:25101204 chr02:025101204 0 W/25101204-25101204 FN427-S Single Base Substitution C-A STOP_GAINED HET LOC_Os02g41750 transposon protein, putative, unclassified SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN427-S.SNP.2:25101205 chr02:025101205 0 W/25101205-25101205 FN427-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3592-S.SNP.2:25101743 chr02:025101743 0 W/25101743-25101743 FN3592-S SNP G -> A AC=2;AN=188;BQB=0.994362;DP=2866;DP4=1391,1403,15,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.87046e-11;MQSB=0.977947;RPB=0.469856;SGB=85.3253;VDB=0.692331;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S77L|275|LOC_Os02g41750|protein_coding|CODING|LOC_Os02g41750.1|2|1) FN2372.SNP.2:25109602 chr02:025109602 0 W/25109602-25109602 FN2372 SNP T -> A AC=1;AN=192;BQB=0.915582;DP=4809;DP4=2316,2050,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12331e-10;MQSB=0.998816;RPB=0.806962;SGB=50.4731;VDB=0.523598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.2:25114902 chr02:025114902 0 W/25114902-25114902 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.788567;DP=2586;DP4=1279,1232,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.17646e-05;MQSB=0.976979;RPB=0.987741;SGB=28.9929;VDB=0.110512;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.2:25121400 chr02:025121400 0 W/25121400-25121400 FN1618-S Single Base Substitution A-C INTRON HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2246-S.SNP.2:25122646 chr02:025122646 0 W/25122646-25122646 FN2246-S SNP C -> G AC=1;AN=190;BQB=0.695854;DP=4615;DP4=2287,1978,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41028e-08;MQSB=0.590037;RPB=0.560331;SGB=58.2031;VDB=0.0147164;EFF=UTR_3_PRIME(MODIFIER||60||341|LOC_Os02g41780|protein_coding|CODING|LOC_Os02g41780.1|8|1) FN1488-S.SNP.2:25130036 chr02:025130036 0 W/25130036-25130036 FN1488-S Single Base Substitution G-A INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1488-S.SNP.2:25130038 chr02:025130038 0 W/25130038-25130038 FN1488-S Single Base Substitution T-A INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2418.SNP.2:25140202 chr02:025140202 0 W/25140202-25140202 FN2418 SNP A -> C AC=1;AN=200;BQB=0.684463;DP=4879;DP4=1973,2540,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.81191e-12;MQSB=0.935206;RPB=0.707288;SGB=15.9106;VDB=0.426232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.2:25144634 chr02:025144634 0 W/25144634-25144634 FN1750-S SNP G -> A AC=1;AN=188;BQB=0.800403;DP=2850;DP4=1548,1268,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.28935e-08;MQSB=0.868598;RPB=0.595137;SGB=38.7926;VDB=0.698215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3788-S.SNP.2:25148223 chr02:025148223 0 W/25148223-25148223 FN3788-S SNP G -> A AC=2;AN=190;BQB=0.969614;DP=2672;DP4=1198,1409,9,8;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0;MQB=1.88665e-06;MQSB=0.0287452;RPB=0.810394;SGB=50.3161;VDB=0.163521;EFF=INTRON(MODIFIER||||236|LOC_Os02g41820|protein_coding|CODING|LOC_Os02g41820.1|2|1) FN2318.SNP.2:25150731 chr02:025150731 0 W/25150731-25150731 FN2318 SNP G -> T AC=1;AN=192;BQB=0.375947;DP=4955;DP4=2383,2325,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.90965e-09;MQSB=0.936632;RPB=0.723523;SGB=5.79046;VDB=0.909278;EFF=INTRON(MODIFIER||||99|LOC_Os02g41830|protein_coding|CODING|LOC_Os02g41830.1|2|1) FN2167-S.SNP.2:25159627 chr02:025159627 0 W/25159627-25159627 FN2167-S SNP A -> T AC=2;AN=168;BQB=0.172648;DP=2790;DP4=1885,857,24,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.26436e-11;MQSB=0.133334;RPB=0.956349;SGB=22.7913;VDB=0.719527;EFF=INTRON(MODIFIER||||353|LOC_Os02g41850|protein_coding|CODING|LOC_Os02g41850.1|2|1) FN4101-S.SNP.2:25164151 chr02:025164151 0 W/25164151-25164151 FN4101-S SNP A -> T AC=1;AN=182;BQB=0.966154;DP=2654;DP4=1349,1226,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.67445e-09;MQSB=0.864457;RPB=0.763839;SGB=57.644;VDB=0.877674;EFF=INTRON(MODIFIER||||289|LOC_Os02g41860|protein_coding|CODING|LOC_Os02g41860.1|2|1),INTRON(MODIFIER||||288|LOC_Os02g41860|protein_coding|CODING|LOC_Os02g41860.2|2|1),INTRON(MODIFIER||||267|LOC_Os02g41860|protein_coding|CODING|LOC_Os02g41860.3|2|1) FN319-S.SNP.2:25176555 chr02:025176555 0 W/25176555-25176555 FN319-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g41890 phytosulfokine receptor precursor, putative, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2606-S.SNP.2:25177257 chr02:025177257 0 W/25177257-25177257 FN2606-S SNP C -> T AC=2;AN=198;BQB=0.991928;DP=4381;DP4=2148,2054,11,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.06947e-10;MQSB=0.957816;RPB=0.520928;SGB=47.3393;VDB=0.536094;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V746I|1052|LOC_Os02g41890|protein_coding|CODING|LOC_Os02g41890.1|1|1) FN1236-S.SNP.2:25177672 chr02:025177672 0 W/25177672-25177672 FN1236-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN3339-S.SNP.2:25197926 chr02:025197926 0 W/25197926-25197926 FN3339-S SNP C -> A AC=2;AN=184;BQB=0.894971;DP=3415;DP4=1495,1798,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.51718e-13;MQSB=0.975625;RPB=0.838416;SGB=15.9331;VDB=0.760293;EFF=INTRON(MODIFIER||||217|LOC_Os02g41940|protein_coding|CODING|LOC_Os02g41940.1|1|1) FN-406.SNP.2:25202613 chr02:025202613 0 W/25202613-25202613 FN-406 Single Base Substitution T-A INTRON HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN594-S.SNP.2:25206495 chr02:025206495 0 W/25206495-25206495 FN594-S Single Base Substitution T-G INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1321-S.SNP.2:25212302 chr02:025212302 0 W/25212302-25212302 FN1321-S Single Base Substitution G-A INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1571-S.SNP.2:25214045 chr02:025214045 0 W/25214045-25214045 FN1571-S Single Base Substitution A-G INTRON HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1080-S.SNP.2:25215812 chr02:025215812 0 W/25215812-25215812 FN1080-S Single Base Substitution G-A INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-103.SNP.2:25220268 chr02:025220268 0 W/25220268-25220268 FN-103 Single Base Substitution G-A INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN3339-S.SNP.2:25220339 chr02:025220339 0 W/25220339-25220339 FN3339-S SNP A -> C AC=2;AN=184;BQB=0.980451;DP=3532;DP4=1654,1630,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.63645e-12;MQSB=0.984963;RPB=0.870628;SGB=-9.49613;VDB=0.604696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.2:25222846 chr02:025222846 0 W/25222846-25222846 FN3517-S SNP C -> A AC=1;AN=188;BQB=0.929788;DP=3239;DP4=1604,1515,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.25326e-06;MQSB=0.71329;RPB=0.935933;SGB=53.5223;VDB=0.870661;EFF=INTRON(MODIFIER||||195|LOC_Os02g41970|protein_coding|CODING|LOC_Os02g41970.1|3|1) FN-111.SNP.2:25222887 chr02:025222887 0 W/25222887-25222887 FN-111 Single Base Substitution G-A INTRON HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1557-S.SNP.2:25234635 chr02:025234635 0 W/25234635-25234635 FN1557-S Single Base Substitution T-C INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-155.SNP.2:25253082 chr02:025253082 0 W/25253082-25253082 FN-155 Single Base Substitution A-G INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3579-S.SNP.2:25253205 chr02:025253205 0 W/25253205-25253205 FN3579-S SNP T -> A AC=1;AN=188;BQB=0.998467;DP=2859;DP4=1336,1473,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.93029e-06;MQSB=0.689014;RPB=0.933937;SGB=35.3493;VDB=0.064148;EFF=INTRON(MODIFIER||||290|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.1|2|1),INTRON(MODIFIER||||290|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.2|2|1),INTRON(MODIFIER||||206|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.3|2|1) FN3711-S.SNP.2:25253919 chr02:025253919 0 W/25253919-25253919 FN3711-S SNP C -> T AC=2;AN=190;BQB=0.908064;DP=2636;DP4=1176,1333,16,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.06169e-05;MQSB=0.569143;RPB=0.999699;SGB=96.5165;VDB=0.526385;EFF=UTR_5_PRIME(MODIFIER||207||290|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.1|2|1),UTR_5_PRIME(MODIFIER||207||290|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.2|2|1),UTR_5_PRIME(MODIFIER||207||206|LOC_Os02g42020|protein_coding|CODING|LOC_Os02g42020.3|2|1) FN2420.SNP.2:25273520 chr02:025273520 0 W/25273520-25273520 FN2420 SNP A -> G AC=1;AN=200;BQB=0.961522;DP=4800;DP4=2161,2276,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26584e-08;MQSB=0.24149;RPB=0.960625;SGB=47.4799;VDB=0.0663;EFF=UTR_3_PRIME(MODIFIER||137||1104|LOC_Os02g42040|protein_coding|CODING|LOC_Os02g42040.1|17|1) FN3778-S.SNP.2:25308921 chr02:025308921 0 W/25308921-25308921 FN3778-S SNP G -> A AC=2;AN=190;BQB=0.937641;DP=2620;DP4=1280,1243,18,15;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0;MQB=4.8859e-11;MQSB=0.332014;RPB=0.847387;SGB=144.727;VDB=0.447855;EFF=INTRON(MODIFIER||||353|LOC_Os02g42100|protein_coding|CODING|LOC_Os02g42100.1|2|1) FN-208.SNP.2:25312327 chr02:025312327 0 W/25312327-25312327 FN-208 Single Base Substitution A-G INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN1534-S.SNP.2:25312869 chr02:025312869 0 W/25312869-25312869 FN1534-S Single Base Substitution G-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN503-S.SNP.2:25331494 chr02:025331494 0 W/25331494-25331494 FN503-S Single Base Substitution G-A INTRON HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2244-S.SNP.2:25340155 chr02:025340155 0 W/25340155-25340155 FN2244-S SNP G -> A AC=2;AN=190;BQB=0.72275;DP=4978;DP4=2546,2147,21,16;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0;MQB=1.45801e-12;MQSB=0.000277681;RPB=0.692493;SGB=-3.2522;VDB=0.421737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G628E|741|LOC_Os02g42134|protein_coding|CODING|LOC_Os02g42134.2|19|1) FN4100-S.SNP.2:25340155 chr02:025340155 0 W/25340155-25340155 FN4100-S SNP G -> A AC=1;AN=182;BQB=0.769897;DP=2737;DP4=1348,1318,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0;MQB=3.48524e-05;MQSB=0.55203;RPB=0.956731;SGB=35.6277;VDB=0.850957;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G628E|741|LOC_Os02g42134|protein_coding|CODING|LOC_Os02g42134.2|19|1) FN2477.SNP.2:25359756 chr02:025359756 0 W/25359756-25359756 FN2477 SNP G -> A AC=1;AN=200;BQB=0.790092;DP=4286;DP4=2246,1780,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000233318;MQB=1.32956e-11;MQSB=0.959293;RPB=0.838529;SGB=19.1209;VDB=0.854934;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L86F|681|LOC_Os02g42160|protein_coding|CODING|LOC_Os02g42160.1|1|1) FN2385.SNP.2:25366945 chr02:025366945 0 W/25366945-25366945 FN2385 SNP G -> T AC=1;AN=192;BQB=0.00165402;DP=4657;DP4=2388,1998,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.6602e-11;MQSB=0.458694;RPB=0.805826;SGB=-5.7391;VDB=0.312252;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E2D|1525|LOC_Os02g42180|protein_coding|CODING|LOC_Os02g42180.1|1|1) FN2171-S.SNP.2:25376639 chr02:025376639 0 W/25376639-25376639 FN2171-S SNP A -> C AC=1;AN=168;BQB=0.905324;DP=3652;DP4=1720,1886,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5038e-12;MQSB=0.971453;RPB=0.899611;SGB=41.6313;VDB=0.959651;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgG|R324|837|LOC_Os02g42190|protein_coding|CODING|LOC_Os02g42190.1|2|1) FN1363-S.SNP.2:25380231 chr02:025380231 0 W/25380231-25380231 FN1363-S Single Base Substitution C-T INTRON HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2598-S.SNP.2:25384749 chr02:025384749 0 W/25384749-25384749 FN2598-S SNP T -> A AC=1;AN=198;BQB=0.999913;DP=4328;DP4=2070,2075,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.65736e-12;MQSB=0.817925;RPB=0.946155;SGB=58.1246;VDB=0.828548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R1092W|1820|LOC_Os02g42200|protein_coding|CODING|LOC_Os02g42200.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R1092W|1300|LOC_Os02g42200|protein_coding|CODING|LOC_Os02g42200.3|12|1) FN4183-S.SNP.2:25404105 chr02:025404105 0 W/25404105-25404105 FN4183-S SNP A -> T AC=1;AN=170;BQB=0.917605;DP=2995;DP4=1451,1476,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.28379e-06;MQSB=0.999177;RPB=0.242373;SGB=34.5445;VDB=0.707824;EFF=UTR_3_PRIME(MODIFIER||160||727|LOC_Os02g42220|protein_coding|CODING|LOC_Os02g42220.1|6|1) FN3378-S.SNP.2:25409363 chr02:025409363 0 W/25409363-25409363 FN3378-S SNP G -> C AC=2;AN=184;BQB=0.801135;DP=2607;DP4=1293,1169,24,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.84373e-16;MQSB=0.371661;RPB=0.707365;SGB=78.7544;VDB=0.945977;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.2:25410557 chr02:025410557 0 W/25410557-25410557 W591-4-1 Single Base Substitution A-T INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN3792-S.SNP.2:25428922 chr02:025428922 0 W/25428922-25428922 FN3792-S SNP C -> T AC=1;AN=190;BQB=0.928493;DP=2200;DP4=969,1164,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23816e-08;MQSB=0.997491;RPB=0.890541;SGB=53.6492;VDB=0.164222;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.2:25429162 chr02:025429162 0 W/25429162-25429162 FN737-S Single Base Substitution G-A INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN2130-S.SNP.2:25430035 chr02:025430035 0 W/25430035-25430035 FN2130-S SNP A -> G AC=1;AN=168;BQB=0.293858;DP=3512;DP4=2020,1461,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.47714e-08;MQSB=0.985964;RPB=0.564796;SGB=24.6155;VDB=0.274938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.2:25439785 chr02:025439785 0 W/25439785-25439785 FN1321-S Single Base Substitution C-T INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1193-S.SNP.2:25442501 chr02:025442501 0 W/25442501-25442501 FN1193-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1193-S.SNP.2:25442518 chr02:025442518 0 W/25442518-25442518 FN1193-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3493-S.SNP.2:25444271 chr02:025444271 0 W/25444271-25444271 FN3493-S SNP G -> C AC=1;AN=184;BQB=0.946764;DP=2699;DP4=1561,1058,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42161e-10;MQSB=0.997017;RPB=0.902343;SGB=62.3078;VDB=0.284054;EFF=INTRON(MODIFIER||||485|LOC_Os02g42310|protein_coding|CODING|LOC_Os02g42310.1|1|1) FN2375.SNP.2:25450078 chr02:025450078 0 W/25450078-25450078 FN2375 SNP T -> G AC=1;AN=192;BQB=0.870292;DP=5072;DP4=2456,2201,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.30505e-11;MQSB=0.748514;RPB=0.941391;SGB=34.0426;VDB=0.295543;EFF=UTR_3_PRIME(MODIFIER||176||485|LOC_Os02g42310|protein_coding|CODING|LOC_Os02g42310.1|10|1),UTR_3_PRIME(MODIFIER||176||399|LOC_Os02g42310|protein_coding|CODING|LOC_Os02g42310.2|9|1),UTR_3_PRIME(MODIFIER||176||350|LOC_Os02g42310|protein_coding|CODING|LOC_Os02g42310.3|10|1),UTR_3_PRIME(MODIFIER||176||325|LOC_Os02g42310|protein_coding|CODING|LOC_Os02g42310.4|8|1) FN459-S.SNP.2:25456535 chr02:025456535 0 W/25456535-25456535 FN459-S Single Base Substitution T-A INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2600-S.SNP.2:25457436 chr02:025457436 0 W/25457436-25457436 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.604133;DP=4222;DP4=1886,2137,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08033e-09;MQSB=0.913755;RPB=0.238963;SGB=72.5245;VDB=0.962839;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q106*|193|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.1|6|1),STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q148*|235|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.2|7|1),STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q181*|268|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.3|6|1),STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q148*|151|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.4|7|1),SPLICE_SITE_REGION(LOW||||193|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.1|6|1),SPLICE_SITE_REGION(LOW||||235|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.2|7|1),SPLICE_SITE_REGION(LOW||||268|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.3|6|1);LOF=(LOC_Os02g42320|LOC_Os02g42320|4|0.75);NMD=(LOC_Os02g42320|LOC_Os02g42320|4|0.75) FN2224-S.SNP.2:25457551 chr02:025457551 0 W/25457551-25457551 FN2224-S SNP C -> G AC=2;AN=190;BQB=0.843042;DP=5280;DP4=2336,2608,33,42;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.03312e-41;MQSB=0.81095;RPB=0.598162;SGB=256.441;VDB=0.284797;EFF=UTR_3_PRIME(MODIFIER||101||151|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.4|7|1),INTRON(MODIFIER||||193|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.1|6|1),INTRON(MODIFIER||||235|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.2|7|1),INTRON(MODIFIER||||268|LOC_Os02g42320|protein_coding|CODING|LOC_Os02g42320.3|6|1) FN810-S.SNP.2:25464718 chr02:025464718 0 W/25464718-25464718 FN810-S Single Base Substitution A-T INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN810-S.SNP.2:25464719 chr02:025464719 0 W/25464719-25464719 FN810-S Single Base Substitution A-T INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1179-S.SNP.2:25466358 chr02:025466358 0 W/25466358-25466358 FN1179-S Single Base Substitution G-A INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN495-S.SNP.2:25472977 chr02:025472977 0 W/25472977-25472977 FN495-S Single Base Substitution A-G INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN2549-S.SNP.2:25480062 chr02:025480062 0 W/25480062-25480062 FN2549-S SNP G -> A AC=2;AN=198;BQB=0.180233;DP=4103;DP4=1872,1641,10,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.15169e-07;MQSB=0.949412;RPB=0.208339;SGB=-62.6354;VDB=0.00588005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.2:25490056 chr02:025490056 0 W/25490056-25490056 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.941517;DP=2630;DP4=1332,1230,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000226473;MQSB=0.999938;RPB=0.393509;SGB=18.3316;VDB=0.878874;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V634|999|LOC_Os02g42370|protein_coding|CODING|LOC_Os02g42370.1|1|1) FN-249.SNP.2:25493739 chr02:025493739 0 W/25493739-25493739 FN-249 Single Base Substitution G-A INTRON HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-245.SNP.2:25498107 chr02:025498107 0 W/25498107-25498107 FN-245 Single Base Substitution G-A UTR_3_PRIME HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2702-S.SNP.2:25502945 chr02:025502945 0 W/25502945-25502945 FN2702-S SNP A -> T AC=1;AN=200;BQB=0.333222;DP=5465;DP4=2860,2285,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.27309e-10;MQSB=0.00868201;RPB=0.933308;SGB=34.6953;VDB=0.923453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.2:25507501 chr02:025507501 0 W/25507501-25507501 FN3421-S SNP G -> T AC=1;AN=184;BQB=0.995947;DP=2703;DP4=1343,1283,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60518e-08;MQSB=0.954163;RPB=0.98192;SGB=35.7479;VDB=0.863887;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.2:25507571 chr02:025507571 0 W/25507571-25507571 FN-345 Single Base Substitution G-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1006-S.SNP.2:25512902 chr02:025512902 0 W/25512902-25512902 FN1006-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN666-S.SNP.2:25522117 chr02:025522117 0 W/25522117-25522117 FN666-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2467.SNP.2:25526354 chr02:025526354 0 W/25526354-25526354 FN2467 SNP C -> T AC=2;AN=200;BQB=0.642939;DP=4781;DP4=2379,1978,24,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.28365e-26;MQSB=0.518621;RPB=0.39502;SGB=5.65004;VDB=0.510107;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.2:25535620 chr02:025535620 0 W/25535620-25535620 FN815-S Single Base Substitution A-G INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1430-S.SNP.2:25539194 chr02:025539194 0 W/25539194-25539194 FN1430-S Single Base Substitution A-G INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN764-S.SNP.2:25540917 chr02:025540917 0 W/25540917-25540917 FN764-S Single Base Substitution C-T INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN3780-S.SNP.2:25552295 chr02:025552295 0 W/25552295-25552295 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.962563;DP=2331;DP4=1047,1188,9,1;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.000101098;MQSB=0.526795;RPB=0.21117;SGB=39.9877;VDB=0.242987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.2:25552296 chr02:025552296 0 W/25552296-25552296 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.988169;DP=3789;DP4=1893,1770,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0;MQB=0.000363381;MQSB=0.132937;RPB=0.965029;SGB=31.1689;VDB=0.657519;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.2:25553933 chr02:025553933 0 W/25553933-25553933 FN487-S Single Base Substitution A-G INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN3371-S.SNP.2:25554262 chr02:025554262 0 W/25554262-25554262 FN3371-S SNP G -> A AC=2;AN=184;BQB=0.991455;DP=2649;DP4=1107,1446,6,13;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=0.000186982;MQSB=0.977106;RPB=0.993633;SGB=80.3949;VDB=0.0245132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.2:25554264 chr02:025554264 0 W/25554264-25554264 FN3371-S SNP C -> A AC=2;AN=184;BQB=0.978027;DP=2624;DP4=1109,1453,6,15;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=0.000644833;MQSB=0.843311;RPB=0.974379;SGB=38.4058;VDB=0.0208788;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.2:25575228 chr02:025575228 0 W/25575228-25575228 FN4201-S SNP C -> T AC=1;AN=170;BQB=0.586163;DP=2626;DP4=1106,1428,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.000380807;MQB=2.47898e-06;MQSB=0.146189;RPB=0.264205;SGB=-16.5469;VDB=0.765375;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.2:25577667 chr02:025577667 0 W/25577667-25577667 FN2649-S SNP A -> T AC=2;AN=200;BQB=0.869561;DP=4971;DP4=2434,2297,29,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000201167;MQB=1.446e-28;MQSB=0.503778;RPB=0.961598;SGB=64.0657;VDB=0.535319;EFF=INTRON(MODIFIER||||215|LOC_Os02g42540|protein_coding|CODING|LOC_Os02g42540.1|2|1) FN985-S.SNP.2:25580698 chr02:025580698 0 W/25580698-25580698 FN985-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g42550 expressed protein SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN985-S.SNP.2:25580699 chr02:025580699 0 W/25580699-25580699 FN985-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2385.SNP.2:25581977 chr02:025581977 0 W/25581977-25581977 FN2385 SNP C -> A AC=1;AN=192;BQB=0.0169413;DP=4543;DP4=2378,1708,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.84457e-09;MQSB=0.394097;RPB=0.519849;SGB=75.4235;VDB=0.471626;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A5|313|LOC_Os02g42550|protein_coding|CODING|LOC_Os02g42550.1|1|1) FN2291.SNP.2:25582054 chr02:025582054 0 W/25582054-25582054 FN2291 SNP G -> T AC=1;AN=192;BQB=0.216018;DP=4244;DP4=2236,1680,26,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.40064e-19;MQSB=0.324469;RPB=0.346769;SGB=85.3296;VDB=0.478237;EFF=UTR_5_PRIME(MODIFIER||63||313|LOC_Os02g42550|protein_coding|CODING|LOC_Os02g42550.1|1|1) FN2203-S.SNP.2:25598959 chr02:025598959 0 W/25598959-25598959 FN2203-S SNP G -> A AC=1;AN=190;BQB=0.423247;DP=4856;DP4=2451,1996,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06404e-15;MQSB=0.956755;RPB=0.980078;SGB=61.9679;VDB=0.776344;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.2:25600843 chr02:025600843 0 W/25600843-25600843 FN4151-S SNP C -> G AC=1;AN=170;BQB=0.523516;DP=2450;DP4=1246,839,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000408163;MQB=0.0115704;MQSB=0.0525441;RPB=0.626456;SGB=30.1021;VDB=0.987752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.2:25612702 chr02:025612702 0 W/25612702-25612702 FN2085-S SNP A -> T AC=1;AN=168;BQB=0.0164142;DP=2116;DP4=1072,967,9,22;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0137051;MQB=3.20617e-05;MQSB=1.13905e-21;RPB=0.110636;SGB=-505.72;VDB=0.222965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.2:25632316 chr02:025632316 0 W/25632316-25632316 FN3288-S SNP C -> T AC=1;AN=184;BQB=0.982133;DP=3034;DP4=1349,1519,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17768e-07;MQSB=0.933257;RPB=0.975015;SGB=28.7043;VDB=0.0715498;EFF=INTRON(MODIFIER||||940|LOC_Os02g42600|protein_coding|CODING|LOC_Os02g42600.1|9|1) FN3288-S.SNP.2:25632319 chr02:025632319 0 W/25632319-25632319 FN3288-S SNP A -> T AC=1;AN=184;BQB=0.998222;DP=3034;DP4=1340,1520,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.63515e-08;MQSB=0.951047;RPB=0.963242;SGB=15.7097;VDB=0.095834;EFF=INTRON(MODIFIER||||940|LOC_Os02g42600|protein_coding|CODING|LOC_Os02g42600.1|9|1) FN3288-S.SNP.2:25632322 chr02:025632322 0 W/25632322-25632322 FN3288-S SNP T -> C AC=1;AN=184;BQB=0.942165;DP=3038;DP4=1349,1512,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91127e-06;MQSB=0.898335;RPB=0.813528;SGB=44.2207;VDB=0.140184;EFF=INTRON(MODIFIER||||940|LOC_Os02g42600|protein_coding|CODING|LOC_Os02g42600.1|9|1) FN448-S.SNP.2:25648686 chr02:025648686 0 W/25648686-25648686 FN448-S Single Base Substitution G-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN424-S.SNP.2:25655445 chr02:025655445 0 W/25655445-25655445 FN424-S Single Base Substitution A-T INTRON HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN424-S.SNP.2:25655446 chr02:025655446 0 W/25655446-25655446 FN424-S Single Base Substitution G-A INTRON HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN424-S.SNP.2:25655453 chr02:025655453 0 W/25655453-25655453 FN424-S Single Base Substitution G-A INTRON HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN510-S.SNP.2:25656619 chr02:025656619 0 W/25656619-25656619 FN510-S Single Base Substitution A-T INTRON HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN588-S.SNP.2:25663570 chr02:025663570 0 W/25663570-25663570 FN588-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2725-S.SNP.2:25670941 chr02:025670941 0 W/25670941-25670941 FN2725-S SNP A -> C AC=2;AN=200;BQB=0.999958;DP=5082;DP4=2430,2362,16,19;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=3.8543e-15;MQSB=1.11661e-07;RPB=0.775313;SGB=76.378;VDB=0.22151;EFF=INTRON(MODIFIER||||488|LOC_Os02g42670|protein_coding|CODING|LOC_Os02g42670.1|11|1) FN-170.SNP.2:25674916 chr02:025674916 0 W/25674916-25674916 FN-170 Single Base Substitution A-C INTRON HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3371-S.SNP.2:25676480 chr02:025676480 0 W/25676480-25676480 FN3371-S SNP G -> A AC=2;AN=184;BQB=0.463114;DP=3244;DP4=1524,1590,13,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02801e-11;MQSB=0.93029;RPB=0.458815;SGB=81.5311;VDB=0.905756;EFF=INTRON(MODIFIER||||286|LOC_Os02g42690|protein_coding|CODING|LOC_Os02g42690.1|1|1) FN3662-S.SNP.2:25676832 chr02:025676832 0 W/25676832-25676832 FN3662-S SNP C -> T AC=1;AN=190;BQB=0.958177;DP=3205;DP4=1522,1574,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68883e-05;MQSB=0.932678;RPB=0.754092;SGB=30.8803;VDB=0.182239;EFF=INTRON(MODIFIER||||286|LOC_Os02g42690|protein_coding|CODING|LOC_Os02g42690.1|1|1) FN873-S.SNP.2:25688383 chr02:025688383 0 W/25688383-25688383 FN873-S Single Base Substitution C-T INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2082-S.SNP.2:25688594 chr02:025688594 0 W/25688594-25688594 FN2082-S SNP A -> G AC=1;AN=168;BQB=0.71923;DP=4176;DP4=1864,2275,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=2.38518e-07;MQSB=1.26856e-10;RPB=0.838044;SGB=21.3605;VDB=0.247092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.2:25693263 chr02:025693263 0 W/25693263-25693263 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.574979;DP=4593;DP4=2378,2034,10,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.78131e-08;MQSB=0.00223522;RPB=0.661509;SGB=4.67442;VDB=0.206325;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.2:25722705 chr02:025722705 0 W/25722705-25722705 FN-223 Single Base Substitution C-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3639-S.SNP.2:25745929 chr02:025745929 0 W/25745929-25745929 FN3639-S SNP G -> C AC=2;AN=190;BQB=0.990157;DP=2748;DP4=1347,1310,8,16;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0;MQB=3.50043e-11;MQSB=0.995243;RPB=0.967596;SGB=103.742;VDB=0.608457;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.2:25748882 chr02:025748882 0 W/25748882-25748882 FN1423-S Single Base Substitution T-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1423-S.SNP.2:25748883 chr02:025748883 0 W/25748883-25748883 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2433.SNP.2:25766124 chr02:025766124 0 W/25766124-25766124 FN2433 SNP T -> C AC=1;AN=200;BQB=0.833318;DP=4845;DP4=2139,2434,10,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.35974e-07;MQSB=4.29856e-05;RPB=0.410651;SGB=65.5058;VDB=0.666402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.2:25774240 chr02:025774240 0 W/25774240-25774240 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.326254;DP=4896;DP4=2425,2237,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97477e-15;MQSB=0.999997;RPB=0.999972;SGB=100.316;VDB=0.740332;EFF=UTR_3_PRIME(MODIFIER||1226||508|LOC_Os02g42860|protein_coding|CODING|LOC_Os02g42860.1|10|1) FN1760-S.SNP.2:25782403 chr02:025782403 0 W/25782403-25782403 FN1760-S SNP A -> T AC=1;AN=188;BQB=0.154397;DP=3618;DP4=1678,1899,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.99596e-05;MQSB=0.743988;RPB=0.99108;SGB=-86.4405;VDB=0.530999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.2:25788480 chr02:025788480 0 W/25788480-25788480 FN3377-S SNP G -> A AC=1;AN=184;BQB=0.985272;DP=3389;DP4=1653,1615,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000295072;MQB=9.10688e-05;MQSB=0.644924;RPB=0.951321;SGB=26.1347;VDB=0.288754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.2:25795201 chr02:025795201 0 W/25795201-25795201 FN1916 Single Base Substitution A-C HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1383-S.SNP.2:25802029 chr02:025802029 0 W/25802029-25802029 FN1383-S Single Base Substitution G-A INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2791-S.SNP.2:25806516 chr02:025806516 0 W/25806516-25806516 FN2791-S SNP T -> A AC=1;AN=198;BQB=0.445809;DP=4239;DP4=2045,2001,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.23518e-10;MQSB=0.752663;RPB=0.209746;SGB=67.9293;VDB=0.246268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N1641I|1706|LOC_Os02g42910|protein_coding|CODING|LOC_Os02g42910.1|9|1) FN-170.SNP.2:25807047 chr02:025807047 0 W/25807047-25807047 FN-170 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g42910 expressed protein SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1121-S.SNP.2:25826480 chr02:025826480 0 W/25826480-25826480 FN1121-S Single Base Substitution G-C INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-185.SNP.2:25835136 chr02:025835136 0 W/25835136-25835136 FN-185 Single Base Substitution G-T INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN3447-S.SNP.2:25835136 chr02:025835136 0 W/25835136-25835136 FN3447-S SNP G -> T AC=1;AN=184;BQB=0.94124;DP=3669;DP4=2010,1554,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.000168;MQSB=0.985197;RPB=0.978248;SGB=53.2642;VDB=0.508616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.2:25837495 chr02:025837495 0 W/25837495-25837495 FN2397 SNP G -> T AC=1;AN=200;BQB=0.779832;DP=3649;DP4=1985,1443,5,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000548095;MQB=0.000126916;MQSB=0.736773;RPB=0.995706;SGB=31.2392;VDB=0.77747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.2:25840371 chr02:025840371 0 W/25840371-25840371 FN1038-S Single Base Substitution A-G INTRON HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN3993-S.SNP.2:25849664 chr02:025849664 0 W/25849664-25849664 FN3993-S SNP C -> T AC=2;AN=168;BQB=0.549032;DP=2556;DP4=1063,1315,9,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.2093e-11;MQSB=0.484662;RPB=0.269632;SGB=78.7577;VDB=0.199772;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.2:25853882 chr02:025853882 0 W/25853882-25853882 FN_798-4-2 Single Base Substitution C-T HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN-255.SNP.2:25859544 chr02:025859544 0 W/25859544-25859544 FN-255 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g42970 NAC domain containing protein, putative, expressed SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1744-S.SNP.2:25863148 chr02:025863148 0 W/25863148-25863148 FN1744-S SNP G -> A AC=2;AN=188;BQB=0.908688;DP=2108;DP4=861,1200,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.2326e-10;MQSB=0.811897;RPB=0.615648;SGB=-39.6481;VDB=0.349806;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.2:25873727 chr02:025873727 0 W/25873727-25873727 FN-223 Single Base Substitution A-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3806-S.SNP.2:25884573 chr02:025884573 0 W/25884573-25884573 FN3806-S SNP A -> G AC=2;AN=190;BQB=0.808535;DP=2463;DP4=1092,1274,11,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.67532e-14;MQSB=0.996616;RPB=0.931044;SGB=82.301;VDB=0.00375304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.2:25898426 chr02:025898426 0 W/25898426-25898426 FN2388 SNP G -> A AC=2;AN=200;BQB=0.901348;DP=4814;DP4=2208,2300,26,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.28041e-31;MQSB=0.999995;RPB=0.237324;SGB=136.297;VDB=0.326868;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E414|578|LOC_Os02g43020|protein_coding|CODING|LOC_Os02g43020.1|3|1) FN2387.SNP.2:25898674 chr02:025898674 0 W/25898674-25898674 FN2387 SNP T -> C AC=1;AN=192;BQB=0.155047;DP=4972;DP4=2518,2246,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.65151e-17;MQSB=0.987316;RPB=0.237933;SGB=89.6809;VDB=0.370546;EFF=INTRON(MODIFIER||||578|LOC_Os02g43020|protein_coding|CODING|LOC_Os02g43020.1|3|1) FN2596-S.SNP.2:25902776 chr02:025902776 0 W/25902776-25902776 FN2596-S SNP A -> G AC=1;AN=198;BQB=0.668628;DP=4359;DP4=2123,2037,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56529e-07;MQSB=0.994669;RPB=0.612284;SGB=36.5539;VDB=0.448075;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.2:25903205 chr02:025903205 0 W/25903205-25903205 FN3560-S SNP G -> A AC=2;AN=188;BQB=0.698175;DP=2705;DP4=1387,1230,12,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.00607e-18;MQSB=0.984333;RPB=0.572498;SGB=71.8555;VDB=0.00498175;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.2:25904879 chr02:025904879 0 W/25904879-25904879 FN984-S Single Base Substitution A-T INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3728-S.SNP.2:25915691 chr02:025915691 0 W/25915691-25915691 FN3728-S SNP T -> C AC=1;AN=190;BQB=0.952686;DP=2624;DP4=1216,1241,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.99803e-10;MQSB=0.933185;RPB=0.977718;SGB=10.3266;VDB=0.898756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N334S|544|LOC_Os02g43040|protein_coding|CODING|LOC_Os02g43040.1|1|1) FN1117-S.SNP.2:25916363 chr02:025916363 0 W/25916363-25916363 FN1117-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g43040 expressed protein SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN702-S.SNP.2:25920402 chr02:025920402 0 W/25920402-25920402 FN702-S Single Base Substitution A-G INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN692-S.SNP.2:25926034 chr02:025926034 0 W/25926034-25926034 FN692-S Single Base Substitution C-T INTRON HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-279.SNP.2:25935044 chr02:025935044 0 W/25935044-25935044 FN-279 Single Base Substitution T-A INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1497-S.SNP.2:25949176 chr02:025949176 0 W/25949176-25949176 FN1497-S Single Base Substitution T-G INTRON HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2226-S.SNP.2:25952479 chr02:025952479 0 W/25952479-25952479 FN2226-S SNP A -> C AC=1;AN=190;BQB=0.0163401;DP=5306;DP4=2754,2159,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000188466;MQB=2.6591e-05;MQSB=0.999845;RPB=0.811976;SGB=4.11112;VDB=0.924081;EFF=INTRON(MODIFIER||||298|LOC_Os02g43090|protein_coding|CODING|LOC_Os02g43090.1|2|1),INTRON(MODIFIER||||298|LOC_Os02g43090|protein_coding|CODING|LOC_Os02g43090.3|1|1) FN2246-S.SNP.2:25957911 chr02:025957911 0 W/25957911-25957911 FN2246-S SNP A -> T AC=1;AN=190;BQB=0.756244;DP=4647;DP4=1905,2366,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0129116;MQB=0.999449;MQSB=0.000305606;RPB=0.13499;SGB=21.1058;VDB=0.611175;EFF=INTRON(MODIFIER||||117|LOC_Os02g43110|protein_coding|CODING|LOC_Os02g43110.1|4|1) FN1655-S.SNP.2:25961271 chr02:025961271 0 W/25961271-25961271 FN1655-S Single Base Substitution A-G INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1339-S.SNP.2:25964140 chr02:025964140 0 W/25964140-25964140 FN1339-S Single Base Substitution T-G INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3701-S.SNP.2:25964771 chr02:025964771 0 W/25964771-25964771 FN3701-S SNP C -> T AC=2;AN=190;BQB=0.808526;DP=2616;DP4=1158,1360,9,13;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0481651;MQB=0.052103;MQSB=2.00892e-17;RPB=0.714726;SGB=94.6341;VDB=0.970228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.2:25965227 chr02:025965227 0 W/25965227-25965227 FN2628-S SNP C -> T AC=1;AN=198;BQB=0.842936;DP=4370;DP4=2301,1796,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.00608e-10;MQSB=0.733447;RPB=0.923447;SGB=11.0951;VDB=0.510572;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.2:25966551 chr02:025966551 0 W/25966551-25966551 FN399-S Single Base Substitution C-T INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN940-S.SNP.2:25969445 chr02:025969445 0 W/25969445-25969445 FN940-S Single Base Substitution C-A INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1444-S.SNP.2:25970141 chr02:025970141 0 W/25970141-25970141 FN1444-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1444-S.SNP.2:25970143 chr02:025970143 0 W/25970143-25970143 FN1444-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3727-S.SNP.2:25979678 chr02:025979678 0 W/25979678-25979678 FN3727-S SNP A -> G AC=2;AN=190;BQB=0.45542;DP=3183;DP4=1450,1482,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90619e-16;MQSB=0.982601;RPB=0.867369;SGB=121.957;VDB=0.221603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.2:25979800 chr02:025979800 0 W/25979800-25979800 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.704225;DP=2855;DP4=1432,1339,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1367e-05;MQSB=0.882948;RPB=0.753946;SGB=-0.806606;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.2:25981102 chr02:025981102 0 W/25981102-25981102 FN4203-S SNP T -> C AC=2;AN=170;BQB=0.863453;DP=2176;DP4=1130,944,22,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.72968e-22;MQSB=0.961032;RPB=0.422524;SGB=138.624;VDB=0.501484;EFF=INTERGENIC(MODIFIER||||||||||1) FN1444-S.SNP.2:25981673 chr02:025981673 0 W/25981673-25981673 FN1444-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN4108-S.SNP.2:25992051 chr02:025992051 0 W/25992051-25992051 FN4108-S SNP A -> C AC=2;AN=182;BQB=0.861023;DP=2549;DP4=1428,1008,9,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.16062e-11;MQSB=0.761308;RPB=0.961633;SGB=70.7363;VDB=0.922673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.2:25993375 chr02:025993375 0 W/25993375-25993375 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.92548;DP=2577;DP4=1055,1431,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.50296e-06;MQSB=0.985502;RPB=0.237207;SGB=35.4339;VDB=0.182763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.2:25996797 chr02:025996797 0 W/25996797-25996797 FN3770-S SNP T -> A AC=2;AN=190;BQB=0.963916;DP=2799;DP4=1217,1398,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.07377e-09;MQSB=0.522786;RPB=0.974113;SGB=33.8752;VDB=0.777487;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.2:25996851 chr02:025996851 0 W/25996851-25996851 FN846-S Single Base Substitution G-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2339.SNP.2:25998351 chr02:025998351 0 W/25998351-25998351 FN2339 SNP T -> G AC=2;AN=192;BQB=0.924049;DP=4305;DP4=2180,1614,17,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.32005e-15;MQSB=0.880886;RPB=0.990858;SGB=33.9487;VDB=0.892388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Gac|Y388D|424|LOC_Os02g43150|protein_coding|CODING|LOC_Os02g43150.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Gac|Y388D|431|LOC_Os02g43150|protein_coding|CODING|LOC_Os02g43150.1|3|1) FN1028-S.SNP.2:26002315 chr02:026002315 0 W/26002315-26002315 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2531-S.SNP.2:26007086 chr02:026007086 0 W/26007086-26007086 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.228418;DP=4385;DP4=2282,1850,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.65346e-11;MQSB=0.823934;RPB=0.801924;SGB=58.1246;VDB=0.346674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.2:26017269 chr02:026017269 0 W/26017269-26017269 FN2327 SNP A -> G AC=1;AN=192;BQB=0.979743;DP=5095;DP4=2558,2109,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.06599e-06;MQSB=0.804497;RPB=0.808193;SGB=16.0922;VDB=0.302434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.2:26020239 chr02:026020239 0 W/26020239-26020239 FN3325-S SNP A -> T AC=1;AN=184;BQB=0.623167;DP=2943;DP4=1403,1415,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.93903e-06;MQSB=0.963564;RPB=0.938126;SGB=32.2261;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.2:26021074 chr02:026021074 0 W/26021074-26021074 FN2302 SNP C -> T AC=1;AN=192;BQB=0.00878571;DP=4716;DP4=2300,2161,25,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.71327e-19;MQSB=0.37738;RPB=0.226463;SGB=143.146;VDB=0.327805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.2:26024474 chr02:026024474 0 W/26024474-26024474 FN2658-S SNP A -> T AC=2;AN=200;BQB=0.958132;DP=4776;DP4=2079,2430,13,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00020938;MQB=6.97276e-17;MQSB=0.74794;RPB=0.200281;SGB=78.9831;VDB=0.136875;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.2:26024606 chr02:026024606 0 W/26024606-26024606 FN319-S Single Base Substitution T-A INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN929-S.SNP.2:26024606 chr02:026024606 0 W/26024606-26024606 FN929-S Single Base Substitution T-A INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN1721-S.SNP.2:26024647 chr02:026024647 0 W/26024647-26024647 FN1721-S SNP T -> C AC=1;AN=188;BQB=0.0749111;DP=4731;DP4=2452,2224,14,17;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.08228e-05;MQSB=0.00872422;RPB=0.922676;SGB=28.6876;VDB=0.880415;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.2:26025536 chr02:026025536 0 W/26025536-26025536 FN4132-S SNP T -> C AC=1;AN=182;BQB=0.998923;DP=2881;DP4=1321,1411,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.32153e-07;MQSB=0.843669;RPB=0.310406;SGB=39.6007;VDB=0.522432;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.2:26026477 chr02:026026477 0 W/26026477-26026477 FN522-S Single Base Substitution A-C INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3438-S.SNP.2:26035030 chr02:026035030 0 W/26035030-26035030 FN3438-S SNP T -> G AC=2;AN=184;BQB=0.999906;DP=2919;DP4=1477,1319,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.80976e-20;MQSB=0.879168;RPB=0.642108;SGB=113.227;VDB=0.803781;EFF=INTRON(MODIFIER||||487|LOC_Os02g43194|protein_coding|CODING|LOC_Os02g43194.1|9|1) FN3437-S.SNP.2:26035593 chr02:026035593 0 W/26035593-26035593 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.928421;DP=3285;DP4=1665,1474,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.16039e-06;MQSB=0.990704;RPB=0.999978;SGB=18.2315;VDB=0.793759;EFF=INTRON(MODIFIER||||487|LOC_Os02g43194|protein_coding|CODING|LOC_Os02g43194.1|9|1) FN1717-S.SNP.2:26037899 chr02:026037899 0 W/26037899-26037899 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.0022481;DP=3029;DP4=1196,1785,8,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.93634e-10;MQSB=0.987079;RPB=0.620003;SGB=-41.0182;VDB=0.16062;EFF=INTRON(MODIFIER||||487|LOC_Os02g43194|protein_coding|CODING|LOC_Os02g43194.1|5|1) FN2465.SNP.2:26038643 chr02:026038643 0 W/26038643-26038643 FN2465 SNP G -> A AC=2;AN=200;BQB=0.78871;DP=4614;DP4=2380,1915,27,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.27713e-25;MQSB=0.97735;RPB=0.999948;SGB=112.85;VDB=0.477334;EFF=INTRON(MODIFIER||||487|LOC_Os02g43194|protein_coding|CODING|LOC_Os02g43194.1|3|1) FN1715-S.SNP.2:26048389 chr02:026048389 0 W/26048389-26048389 FN1715-S SNP C -> A AC=2;AN=188;BQB=0.903622;DP=1857;DP4=1003,803,6,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.25188e-05;MQSB=0.902575;RPB=0.688163;SGB=32.441;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.2:26048605 chr02:026048605 0 W/26048605-26048605 FN1036-S Single Base Substitution C-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1658-S.SNP.2:26048605 chr02:026048605 0 W/26048605-26048605 FN1658-S SNP C -> T AC=2;AN=188;BQB=0.874903;DP=2323;DP4=1279,1011,11,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.55022e-07;MQSB=0.526293;RPB=0.928093;SGB=8.62479;VDB=0.454408;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.2:26050945 chr02:026050945 0 W/26050945-26050945 FN-64 Single Base Substitution G-A INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-158.SNP.2:26052017 chr02:026052017 0 W/26052017-26052017 FN-158 Single Base Substitution C-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN2418.SNP.2:26052525 chr02:026052525 0 W/26052525-26052525 FN2418 SNP A -> G AC=1;AN=200;BQB=0.964171;DP=4108;DP4=1986,1869,6,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.39171e-05;MQSB=0.116583;RPB=0.269054;SGB=40.4492;VDB=0.123955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.2:26053156 chr02:026053156 0 W/26053156-26053156 FN2218-S SNP C -> G AC=1;AN=190;BQB=0.824108;DP=3688;DP4=1632,1717,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000813449;MQB=7.84941e-06;MQSB=0.0870818;RPB=0.984847;SGB=67.3108;VDB=0.832695;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G337R|440|LOC_Os02g43250|protein_coding|CODING|LOC_Os02g43250.1|1|1) FN3415-S.SNP.2:26053567 chr02:026053567 0 W/26053567-26053567 FN3415-S SNP T -> C AC=1;AN=184;BQB=0.981806;DP=4549;DP4=1980,2358,16,20;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.23555e-20;MQSB=0.997465;RPB=0.982375;SGB=76.2326;VDB=0.394798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K200E|440|LOC_Os02g43250|protein_coding|CODING|LOC_Os02g43250.1|1|1) FN323-S.SNP.2:26056323 chr02:026056323 0 W/26056323-26056323 FN323-S Single Base Substitution C-T INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3772-S.SNP.2:26056397 chr02:026056397 0 W/26056397-26056397 FN3772-S SNP G -> A AC=2;AN=190;BQB=0.972579;DP=2948;DP4=1476,1323,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.74267e-15;MQSB=0.86577;RPB=0.513024;SGB=54.3062;VDB=0.607205;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.2:26063084 chr02:026063084 0 W/26063084-26063084 FN558-S Single Base Substitution G-T INTRON HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3388-S.SNP.2:26064146 chr02:026064146 0 W/26064146-26064146 FN3388-S SNP G -> A AC=2;AN=184;BQB=0.870878;DP=3453;DP4=1713,1605,18,27;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19804e-22;MQSB=0.935638;RPB=0.341638;SGB=49.4124;VDB=0.145681;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C669|863|LOC_Os02g43270|protein_coding|CODING|LOC_Os02g43270.1|7|1) FN2500.SNP.2:26073338 chr02:026073338 0 W/26073338-26073338 FN2500 SNP A -> G AC=1;AN=200;BQB=0.893596;DP=4004;DP4=2139,1650,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.13898e-07;MQSB=0.846917;RPB=0.992562;SGB=29.4541;VDB=0.32632;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.2:26081202 chr02:026081202 0 W/26081202-26081202 FN-232 Single Base Substitution G-A INTRON HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1551-S.SNP.2:26081932 chr02:026081932 0 W/26081932-26081932 FN1551-S Single Base Substitution C-T INTRON HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN3767-S.SNP.2:26091475 chr02:026091475 0 W/26091475-26091475 FN3767-S SNP C -> T AC=2;AN=190;BQB=0.726017;DP=3180;DP4=1657,1395,16,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.43654e-16;MQSB=0.998525;RPB=0.94045;SGB=72.1834;VDB=0.435035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E131K|365|LOC_Os02g43290|protein_coding|CODING|LOC_Os02g43290.1|1|1) FN1058-S.SNP.2:26097231 chr02:026097231 0 W/26097231-26097231 FN1058-S Single Base Substitution C-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1026-S.SNP.2:26107462 chr02:026107462 0 W/26107462-26107462 FN1026-S Single Base Substitution C-A INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN4129-S.SNP.2:26107944 chr02:026107944 0 W/26107944-26107944 FN4129-S SNP A -> T AC=1;AN=182;BQB=0.816594;DP=3442;DP4=1562,1749,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.14018e-10;MQSB=0.794363;RPB=0.123761;SGB=66.6657;VDB=0.654918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.2:26109426 chr02:026109426 0 W/26109426-26109426 FN2261-S SNP C -> T AC=2;AN=190;BQB=0.411525;DP=4538;DP4=2202,1879,50,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000220361;MQB=1.9478e-43;MQSB=0.97828;RPB=0.999391;SGB=240.267;VDB=0.678239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:26109605 chr02:026109605 0 W/26109605-26109605 FN2417 SNP A -> G AC=1;AN=200;BQB=0.0432915;DP=4826;DP4=2167,2247,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.95236e-07;MQSB=0.82078;RPB=0.710878;SGB=1.46408;VDB=0.315365;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.2:26118008 chr02:026118008 0 W/26118008-26118008 FN_N1-26-1 Single Base Substitution A-G HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN724-S.SNP.2:26119139 chr02:026119139 0 W/26119139-26119139 FN724-S Single Base Substitution T-G INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1300-S.SNP.2:26123713 chr02:026123713 0 W/26123713-26123713 FN1300-S Single Base Substitution G-A INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN-6.SNP.2:26128367 chr02:026128367 0 W/26128367-26128367 FN-6 Single Base Substitution T-C INTERGENIC Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN3637-S.SNP.2:26130028 chr02:026130028 0 W/26130028-26130028 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.998728;DP=2682;DP4=1293,1225,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.56217e-09;MQSB=0.895833;RPB=0.897338;SGB=43.2083;VDB=0.43361;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.2:26130029 chr02:026130029 0 W/26130029-26130029 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.80339;DP=2678;DP4=1299,1275,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.86665e-09;MQSB=0.850486;RPB=0.938855;SGB=58.2031;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.2:26133126 chr02:026133126 0 W/26133126-26133126 FN1116-S Single Base Substitution G-C INTERGENIC HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1234-S.SNP.2:26133989 chr02:026133989 0 W/26133989-26133989 FN1234-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN550-S.SNP.2:26158049 chr02:026158049 0 W/26158049-26158049 FN550-S Single Base Substitution C-T INTRON HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1720-S.SNP.2:26158459 chr02:026158459 0 W/26158459-26158459 FN1720-S SNP A -> G AC=1;AN=188;BQB=0.00618584;DP=3822;DP4=1814,1961,20,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19946e-08;MQSB=0.989112;RPB=0.822304;SGB=-268.529;VDB=0.199761;EFF=INTRON(MODIFIER||||822|LOC_Os02g43350|protein_coding|CODING|LOC_Os02g43350.1|1|1) FN-81.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN-81 Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1336-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN1336-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1358-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN1358-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1513-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN1513-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2374.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN2374 SNP T -> C AC=1;AN=192;BQB=0.56537;DP=4951;DP4=2385,2247,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.25059e-16;MQSB=0.872626;RPB=0.714901;SGB=93.2452;VDB=0.302259;EFF=UTR_5_PRIME(MODIFIER||180||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1) FN2794-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN2794-S SNP T -> C AC=2;AN=198;BQB=0.859404;DP=4533;DP4=2191,2056,31,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.57883e-24;MQSB=0.954457;RPB=0.0529629;SGB=176.764;VDB=0.220448;EFF=UTR_5_PRIME(MODIFIER||180||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1) FN3505-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN3505-S SNP T -> C AC=2;AN=188;BQB=0.888501;DP=2742;DP4=1450,1214,11,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.69956e-11;MQSB=0.970398;RPB=0.149053;SGB=71.6954;VDB=0.910402;EFF=UTR_5_PRIME(MODIFIER||180||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1) FN3713-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN3713-S SNP T -> C AC=2;AN=190;BQB=0.958854;DP=2643;DP4=1446,1103,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2423e-12;MQSB=0.999979;RPB=0.928336;SGB=94.6341;VDB=0.530967;EFF=UTR_5_PRIME(MODIFIER||180||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1) FN914-S.SNP.2:26164165 chr02:026164165 0 W/26164165-26164165 FN914-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3396-S.SNP.2:26164167 chr02:026164167 0 W/26164167-26164167 FN3396-S SNP C -> A AC=1;AN=184;BQB=0.899263;DP=2813;DP4=1545,1189,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22909e-11;MQSB=0.98589;RPB=0.902541;SGB=71.3514;VDB=0.427959;EFF=START_GAINED(LOW||||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1),UTR_5_PRIME(MODIFIER||182||138|LOC_Os02g43360|protein_coding|CODING|LOC_Os02g43360.1|1|1) FN2265-S.SNP.2:26164771 chr02:026164771 0 W/26164771-26164771 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.986362;DP=4820;DP4=1910,2571,8,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.04508e-13;MQSB=0.99978;RPB=0.0587069;SGB=56.8601;VDB=0.00397326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.2:26165090 chr02:026165090 0 W/26165090-26165090 FN-308 Single Base Substitution G-A INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN-349.SNP.2:26166207 chr02:026166207 0 W/26166207-26166207 FN-349 Single Base Substitution T-C INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN919-S.SNP.2:26170850 chr02:026170850 0 W/26170850-26170850 FN919-S Single Base Substitution G-A INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN846-S.SNP.2:26172956 chr02:026172956 0 W/26172956-26172956 FN846-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3456-S.SNP.2:26174125 chr02:026174125 0 W/26174125-26174125 FN3456-S SNP G -> A AC=2;AN=184;BQB=0.171462;DP=3100;DP4=1652,1312,12,2;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.57817e-05;MQSB=0.485515;RPB=0.0532587;SGB=39.2697;VDB=0.428412;EFF=INTRON(MODIFIER||||674|LOC_Os02g43370|protein_coding|CODING|LOC_Os02g43370.1|2|1),INTRON(MODIFIER||||674|LOC_Os02g43370|protein_coding|CODING|LOC_Os02g43370.2|2|1) FN898-S.SNP.2:26177599 chr02:026177599 0 W/26177599-26177599 FN898-S Single Base Substitution A-C INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2289.SNP.2:26179050 chr02:026179050 0 W/26179050-26179050 FN2289 SNP A -> T AC=2;AN=192;BQB=0.998729;DP=4760;DP4=1893,2149,24,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.54586e-22;MQSB=0.292111;RPB=0.883721;SGB=8.3696;VDB=0.23633;EFF=INTRON(MODIFIER||||1760|LOC_Os02g43390|protein_coding|CODING|LOC_Os02g43390.1|3|1) FN3326-S.SNP.2:26183293 chr02:026183293 0 W/26183293-26183293 FN3326-S SNP C -> T AC=2;AN=184;BQB=0.810025;DP=3546;DP4=1662,1769,14,20;HOB=0.0215028;ICB=0.494625;MQ=23;MQ0F=0.297518;MQB=0.293256;MQSB=5.0039e-21;RPB=0.443792;SGB=148.222;VDB=0.00833113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G1188D|1760|LOC_Os02g43390|protein_coding|CODING|LOC_Os02g43390.1|2|1) FN1485-S.SNP.2:26186571 chr02:026186571 0 W/26186571-26186571 FN1485-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g43390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN4255-S.SNP.2:26186875 chr02:026186875 0 W/26186875-26186875 FN4255-S SNP C -> A AC=1;AN=170;BQB=0.659504;DP=2741;DP4=1344,1327,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0744254;MQB=0.290576;MQSB=0.00073819;RPB=0.623415;SGB=70.0854;VDB=0.853673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G16C|1760|LOC_Os02g43390|protein_coding|CODING|LOC_Os02g43390.1|1|1) FN850-S.SNP.2:26190253 chr02:026190253 0 W/26190253-26190253 FN850-S Single Base Substitution C-T INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN3362-S.SNP.2:26196703 chr02:026196703 0 W/26196703-26196703 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.996014;DP=3326;DP4=1704,1484,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.37617e-10;MQSB=0.640825;RPB=0.673789;SGB=53.3568;VDB=0.00575367;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.2:26196908 chr02:026196908 0 W/26196908-26196908 FN691-S Single Base Substitution G-A INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2609-S.SNP.2:26205199 chr02:026205199 0 W/26205199-26205199 FN2609-S SNP C -> G AC=1;AN=198;BQB=0.595537;DP=4016;DP4=1798,1939,21,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.641e-25;MQSB=0.979881;RPB=0.776434;SGB=4.01782;VDB=0.541511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.2:26213596 chr02:026213596 0 W/26213596-26213596 FN3437-S SNP G -> T AC=2;AN=184;BQB=0.696545;DP=2769;DP4=1419,1254,16,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.81048e-16;MQSB=0.729196;RPB=0.6841;SGB=99.14;VDB=0.998514;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:26217822 chr02:026217822 0 W/26217822-26217822 FN2417 SNP C -> T AC=2;AN=200;BQB=0.418319;DP=4509;DP4=2312,1878,30,12;HOB=0.0198;ICB=0.495051;MQ=24;MQ0F=0.258816;MQB=0.247405;MQSB=0;RPB=0.153408;SGB=187.814;VDB=0.269016;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.2:26224100 chr02:026224100 0 W/26224100-26224100 FN3992-S SNP C -> T AC=1;AN=168;BQB=0.577024;DP=3094;DP4=1621,1350,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.122495;MQB=0.998417;MQSB=5.17311e-11;RPB=0.514297;SGB=34.748;VDB=0.140581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S522N|1732|LOC_Os02g43450|protein_coding|CODING|LOC_Os02g43450.1|2|1) FN632-S.SNP.2:26226587 chr02:026226587 0 W/26226587-26226587 FN632-S Single Base Substitution A-G INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2609-S.SNP.2:26235101 chr02:026235101 0 W/26235101-26235101 FN2609-S SNP C -> G AC=1;AN=198;BQB=0.993043;DP=3952;DP4=1913,1752,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.96256e-18;MQSB=0.947966;RPB=0.620867;SGB=60.4858;VDB=0.1434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Gcc|P732A|1439|LOC_Os02g43460|protein_coding|CODING|LOC_Os02g43460.1|1|1) FN-98.SNP.2:26247798 chr02:026247798 0 W/26247798-26247798 FN-98 Single Base Substitution C-A INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN3715-S.SNP.2:26249444 chr02:026249444 0 W/26249444-26249444 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.579267;DP=2948;DP4=1498,1352,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.84158e-12;MQSB=0.972483;RPB=0.743722;SGB=112.85;VDB=0.700482;EFF=INTRON(MODIFIER||||332|LOC_Os02g43500|protein_coding|CODING|LOC_Os02g43500.1|6|1) FN526-S.SNP.2:26249903 chr02:026249903 0 W/26249903-26249903 FN526-S Single Base Substitution A-G INTRON HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1264-S.SNP.2:26254385 chr02:026254385 0 W/26254385-26254385 FN1264-S Single Base Substitution C-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3433-S.SNP.2:26255874 chr02:026255874 0 W/26255874-26255874 FN3433-S SNP A -> G AC=1;AN=184;BQB=0.863216;DP=2903;DP4=1550,1243,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000111232;MQSB=0.992349;RPB=0.999982;SGB=44.2207;VDB=0.989831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.2:26256423 chr02:026256423 0 W/26256423-26256423 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.993183;DP=4622;DP4=2129,2238,10,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=7.66931e-09;MQSB=0.914686;RPB=0.0903109;SGB=61.9006;VDB=0.604286;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.2:26257590 chr02:026257590 0 W/26257590-26257590 FN706-S Single Base Substitution T-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-281.SNP.2:26257654 chr02:026257654 0 W/26257654-26257654 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4172-S.SNP.2:26285679 chr02:026285679 0 W/26285679-26285679 FN4172-S SNP C -> A AC=1;AN=170;BQB=0.342566;DP=2621;DP4=1294,1250,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.15861e-05;MQSB=0.999098;RPB=0.967494;SGB=56.7575;VDB=0.90397;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.2:26290666 chr02:026290666 0 W/26290666-26290666 FN3374-S SNP G -> T AC=1;AN=184;BQB=0.996003;DP=2982;DP4=1215,1637,11,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09249e-16;MQSB=0.955378;RPB=0.909516;SGB=-10.0179;VDB=0.793322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.2:26290669 chr02:026290669 0 W/26290669-26290669 FN3374-S SNP A -> G AC=1;AN=184;BQB=0.804087;DP=2981;DP4=1191,1614,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20683e-13;MQSB=0.979691;RPB=0.998822;SGB=18.9766;VDB=0.900914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.2:26291702 chr02:026291702 0 W/26291702-26291702 FN1217-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3388-S.SNP.2:26296263 chr02:026296263 0 W/26296263-26296263 FN3388-S SNP C -> A AC=2;AN=184;BQB=0.995147;DP=2830;DP4=1226,1483,15,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.89546e-20;MQSB=0.838467;RPB=0.845415;SGB=161.787;VDB=0.915558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.2:26297635 chr02:026297635 0 W/26297635-26297635 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.199022;DP=4778;DP4=2312,2208,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35695e-12;MQSB=0.812165;RPB=0.999917;SGB=61.9006;VDB=0.575871;EFF=INTRON(MODIFIER||||269|LOC_Os02g43590|protein_coding|CODING|LOC_Os02g43590.1|8|1) FN2541-S.SNP.2:26297844 chr02:026297844 0 W/26297844-26297844 FN2541-S SNP T -> A AC=1;AN=198;BQB=0.791812;DP=4229;DP4=1911,2103,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000236463;MQB=2.37422e-10;MQSB=0.788717;RPB=0.947174;SGB=31.9395;VDB=0.118066;EFF=INTRON(MODIFIER||||269|LOC_Os02g43590|protein_coding|CODING|LOC_Os02g43590.1|7|1) FN-152.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN-152 Single Base Substitution T-G INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN-231.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN-231 Single Base Substitution T-G INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN-243 Single Base Substitution T-G INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN1270-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN1270-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1559-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN1559-S Single Base Substitution T-G INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1726-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN1726-S SNP T -> G AC=1;AN=188;BQB=0.996513;DP=3645;DP4=1572,2033,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07064e-10;MQSB=0.999006;RPB=0.990978;SGB=8.62479;VDB=0.824891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN2141-S SNP T -> G AC=2;AN=168;BQB=0.731974;DP=3677;DP4=1657,1956,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.74334e-19;MQSB=0.999371;RPB=0.272595;SGB=-146.877;VDB=0.669153;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN2342 SNP T -> G AC=1;AN=192;BQB=0.389098;DP=5067;DP4=2419,2362,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.73925e-09;MQSB=0.991496;RPB=0.100636;SGB=39.78;VDB=0.422592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN2433 SNP T -> G AC=1;AN=200;BQB=0.997838;DP=4725;DP4=2258,2158,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.55169e-14;MQSB=0.939063;RPB=0.253498;SGB=52.9314;VDB=0.460246;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN2555-S SNP T -> G AC=2;AN=198;BQB=0.981926;DP=4097;DP4=1927,1927,21,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.23624e-24;MQSB=0.980481;RPB=0.637795;SGB=182.807;VDB=0.313072;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN3484-S SNP T -> G AC=1;AN=184;BQB=0.852156;DP=2841;DP4=1576,1041,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.69909e-10;MQSB=0.99452;RPB=0.19064;SGB=28.3187;VDB=0.282031;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN3708-S SNP T -> G AC=2;AN=190;BQB=0.786511;DP=2964;DP4=1538,1179,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.24649e-19;MQSB=0.978443;RPB=0.998925;SGB=140.173;VDB=0.423683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN3950-S SNP T -> G AC=2;AN=168;BQB=0.801064;DP=2745;DP4=1483,1028,25,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.72418e-17;MQSB=0.991132;RPB=0.964799;SGB=80.5243;VDB=0.785452;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN4208-S SNP T -> G AC=1;AN=170;BQB=0.762208;DP=2681;DP4=1409,1082,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.33237e-14;MQSB=0.994466;RPB=0.831486;SGB=65.8619;VDB=0.712796;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN434-S Single Base Substitution T-G INTERGENIC HOMO SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN460-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN460-S Single Base Substitution T-G INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN798-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN798-S Single Base Substitution T-G INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN873-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN873-S Single Base Substitution T-G INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN932-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN932-S Single Base Substitution T-G INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN961-S.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN961-S Single Base Substitution T-G INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN_831-4-1.SNP.2:26304188 chr02:026304188 0 W/26304188-26304188 FN_831-4-1 Single Base Substitution T-G HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. W7-1-1.SNP.2:26309562 chr02:026309562 0 W/26309562-26309562 W7-1-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g43594 MSP domain containing protein, putative, expressed SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2697-S.SNP.2:26311167 chr02:026311167 0 W/26311167-26311167 FN2697-S SNP C -> T AC=1;AN=200;BQB=0.991097;DP=4739;DP4=2347,2091,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39017e-20;MQSB=0.978732;RPB=0.996268;SGB=112.373;VDB=0.289158;EFF=INTRON(MODIFIER||||207|LOC_Os02g43594|protein_coding|CODING|LOC_Os02g43594.3|7|1) FN3911-S.SNP.2:26317181 chr02:026317181 0 W/26317181-26317181 FN3911-S SNP T -> A AC=1;AN=158;BQB=0.669528;DP=2476;DP4=1356,1009,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000678056;MQSB=0.943094;RPB=0.98581;SGB=7.23273;VDB=0.707824;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.2:26324983 chr02:026324983 0 W/26324983-26324983 FN3492-S SNP A -> G AC=1;AN=184;BQB=0.667971;DP=2892;DP4=1455,1338,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38601e-08;MQSB=0.987822;RPB=0.153645;SGB=6.80232;VDB=0.0605845;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G302|494|LOC_Os02g43620|protein_coding|CODING|LOC_Os02g43620.1|2|1) FN1543-S.SNP.2:26328983 chr02:026328983 0 W/26328983-26328983 FN1543-S Single Base Substitution C-T INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN4325-S.SNP.2:26330205 chr02:026330205 0 W/26330205-26330205 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.661498;DP=2294;DP4=1252,963,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.47506e-10;MQSB=0.999894;RPB=0.477601;SGB=22.3266;VDB=0.850592;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.2:26335582 chr02:026335582 0 W/26335582-26335582 FN706-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g43640 retrotransposon protein, putative, unclassified, expressed SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-301.SNP.2:26339871 chr02:026339871 0 W/26339871-26339871 FN-301 Single Base Substitution G-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2782-S.SNP.2:26350002 chr02:026350002 0 W/26350002-26350002 FN2782-S SNP T -> C AC=1;AN=198;BQB=0.408823;DP=3898;DP4=1599,2039,8,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4444e-14;MQSB=0.445928;RPB=0.691425;SGB=104.69;VDB=0.0599815;EFF=UTR_3_PRIME(MODIFIER||67||385|LOC_Os02g43670|protein_coding|CODING|LOC_Os02g43670.1|2|1) FN3867-S.SNP.2:26351063 chr02:026351063 0 W/26351063-26351063 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.808152;DP=2606;DP4=1397,1092,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.49869e-07;MQSB=0.999564;RPB=0.608109;SGB=37.4429;VDB=0.0452691;EFF=INTRON(MODIFIER||||385|LOC_Os02g43670|protein_coding|CODING|LOC_Os02g43670.1|1|1) FN3901-S.SNP.2:26359714 chr02:026359714 0 W/26359714-26359714 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.999889;DP=1769;DP4=1026,644,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.25491e-08;MQSB=0.524093;RPB=0.562117;SGB=51.4366;VDB=0.36367;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.2:26361774 chr02:026361774 0 W/26361774-26361774 FN_546-3-1 Single Base Substitution G-A HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN457-S.SNP.2:26362221 chr02:026362221 0 W/26362221-26362221 FN457-S Single Base Substitution C-T INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN701-S.SNP.2:26368314 chr02:026368314 0 W/26368314-26368314 FN701-S Single Base Substitution A-G INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2701-S.SNP.2:26373301 chr02:026373301 0 W/26373301-26373301 FN2701-S SNP T -> C AC=1;AN=200;BQB=0.567071;DP=5090;DP4=2340,2594,6,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78457e-13;MQSB=0.603664;RPB=0.266579;SGB=72.7161;VDB=0.152659;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN-311 Single Base Substitution C-T INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2317.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN2317 SNP C -> T AC=1;AN=192;BQB=0.526483;DP=4816;DP4=2138,2238,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.66965e-07;MQSB=0.264047;RPB=0.089595;SGB=31.4783;VDB=0.0181379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN2674-S SNP C -> T AC=2;AN=200;BQB=0.999787;DP=4985;DP4=2302,2378,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.5734e-22;MQSB=0.835399;RPB=0.842572;SGB=92.009;VDB=0.254455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.703643;DP=2377;DP4=878,1420,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05398e-06;MQSB=0.965272;RPB=0.452366;SGB=28.7043;VDB=0.281503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN3775-S SNP C -> T AC=2;AN=190;BQB=0.92035;DP=2337;DP4=843,1397,7,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.83592e-10;MQSB=0.885784;RPB=0.970776;SGB=76.4186;VDB=0.565387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN3865-S SNP C -> T AC=2;AN=158;BQB=0.99561;DP=2002;DP4=743,1168,6,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.12461e-13;MQSB=0.750744;RPB=0.140469;SGB=86.3921;VDB=0.308092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN4116-S SNP C -> T AC=2;AN=182;BQB=0.76863;DP=2383;DP4=779,1529,9,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.63242e-13;MQSB=0.996575;RPB=0.918556;SGB=63.7146;VDB=0.489777;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN742-S Single Base Substitution C-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN778-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN778-S Single Base Substitution C-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN899-S.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN899-S Single Base Substitution C-T INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN_N2-29a-1.SNP.2:26392004 chr02:026392004 0 W/26392004-26392004 FN_N2-29a-1 Single Base Substitution C-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN777-S.SNP.2:26397191 chr02:026397191 0 W/26397191-26397191 FN777-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g43750 transcription initiation factor, putative, expressed SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2698-S.SNP.2:26403679 chr02:026403679 0 W/26403679-26403679 FN2698-S SNP T -> C AC=1;AN=200;BQB=0.528447;DP=4934;DP4=2426,2318,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68742e-10;MQSB=0.563952;RPB=0.986725;SGB=61.9006;VDB=0.762878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.2:26404467 chr02:026404467 0 W/26404467-26404467 FN-191 Single Base Substitution G-A INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN-191.SNP.2:26404468 chr02:026404468 0 W/26404468-26404468 FN-191 Single Base Substitution G-A INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN-191.SNP.2:26404469 chr02:026404469 0 W/26404469-26404469 FN-191 Single Base Substitution G-A INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN2429.SNP.2:26405622 chr02:026405622 0 W/26405622-26405622 FN2429 SNP T -> A AC=1;AN=200;BQB=0.999982;DP=4713;DP4=2194,2288,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.43526e-06;MQSB=0.801199;RPB=0.932821;SGB=45.0543;VDB=0.534701;EFF=INTRON(MODIFIER||||229|LOC_Os02g43760|protein_coding|CODING|LOC_Os02g43760.1|3|1) FN2174-S.SNP.2:26408548 chr02:026408548 0 W/26408548-26408548 FN2174-S SNP T -> A AC=1;AN=168;BQB=0.00440082;DP=4017;DP4=2115,1856,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.52616e-05;MQSB=0.878495;RPB=0.767874;SGB=-126.487;VDB=0.823957;EFF=INTRON(MODIFIER||||229|LOC_Os02g43760|protein_coding|CODING|LOC_Os02g43760.1|6|1) FN-250.SNP.2:26409726 chr02:026409726 0 W/26409726-26409726 FN-250 Single Base Substitution G-A UTR_3_PRIME HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN-20.SNP.2:26417803 chr02:026417803 0 W/26417803-26417803 FN-20 Single Base Substitution T-A INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1679-S.SNP.2:26419856 chr02:026419856 0 W/26419856-26419856 FN1679-S SNP A -> G AC=1;AN=188;BQB=0.0402383;DP=3476;DP4=1788,1623,13,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.38222e-08;MQSB=0.741759;RPB=0.842869;SGB=-73.5561;VDB=0.38238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.2:26420267 chr02:026420267 0 W/26420267-26420267 FN3958-S SNP G -> T AC=1;AN=168;BQB=0.967943;DP=3027;DP4=1319,1535,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.07016e-11;MQSB=0.506466;RPB=0.794843;SGB=58.7637;VDB=0.893344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.2:26421707 chr02:026421707 0 W/26421707-26421707 FN3626-S SNP A -> G AC=1;AN=190;BQB=0.733196;DP=3134;DP4=1534,1509,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.76771e-06;MQSB=0.985171;RPB=0.0453693;SGB=49.0954;VDB=0.187282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2197-S.SNP.2:26425164 chr02:026425164 0 W/26425164-26425164 FN2197-S SNP A -> G AC=2;AN=190;BQB=0.746403;DP=4644;DP4=2022,2092,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.48055e-15;MQSB=0.721662;RPB=0.996757;SGB=-6.57546;VDB=0.242756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.2:26425386 chr02:026425386 0 W/26425386-26425386 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.114064;DP=2922;DP4=1306,1458,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000376093;MQSB=0.000710672;RPB=0.0733427;SGB=-0.550503;VDB=0.0538264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.2:26428330 chr02:026428330 0 W/26428330-26428330 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.913187;DP=3589;DP4=1742,1743,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.0350456;MQSB=0.620208;RPB=0.104034;SGB=48.7425;VDB=0.00440415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.2:26429431 chr02:026429431 0 W/26429431-26429431 FN1369-S Single Base Substitution A-G INTRON HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN4017-S.SNP.2:26430356 chr02:026430356 0 W/26430356-26430356 FN4017-S SNP C -> A AC=1;AN=168;BQB=0.340096;DP=3600;DP4=1570,1740,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00555556;MQB=0.0191146;MQSB=0.0983101;RPB=0.92557;SGB=51.902;VDB=0.771704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T210N|1869|LOC_Os02g43800|protein_coding|CODING|LOC_Os02g43800.1|2|1) FN1319-S.SNP.2:26436624 chr02:026436624 0 W/26436624-26436624 FN1319-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1665-S.SNP.2:26438071 chr02:026438071 0 W/26438071-26438071 FN1665-S Single Base Substitution C-G INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN-89.SNP.2:26439742 chr02:026439742 0 W/26439742-26439742 FN-89 Single Base Substitution T-A INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2696-S.SNP.2:26441635 chr02:026441635 0 W/26441635-26441635 FN2696-S SNP C -> T AC=2;AN=200;BQB=0.461823;DP=4700;DP4=2073,2319,19,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000212766;MQB=6.8645e-27;MQSB=0.909765;RPB=0.874819;SGB=105.035;VDB=0.212344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.2:26447199 chr02:026447199 0 W/26447199-26447199 FN2550-S SNP G -> C AC=1;AN=198;BQB=0.99685;DP=4437;DP4=2121,2133,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.98695e-06;MQSB=0.88395;RPB=0.835479;SGB=35.7638;VDB=0.704456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.2:26449447 chr02:026449447 0 W/26449447-26449447 FN2591-S SNP A -> T AC=1;AN=198;BQB=0.991858;DP=4662;DP4=2103,2325,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.72741e-05;MQSB=0.961365;RPB=0.562578;SGB=25.7687;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.2:26459228 chr02:026459228 0 W/26459228-26459228 FN3548-S SNP T -> G AC=1;AN=188;BQB=0.862227;DP=2597;DP4=1100,1392,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.96385e-09;MQSB=0.995387;RPB=0.555261;SGB=58.0655;VDB=0.176107;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.2:26459363 chr02:026459363 0 W/26459363-26459363 FN1472-S Single Base Substitution A-G INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN818-S.SNP.2:26464138 chr02:026464138 0 W/26464138-26464138 FN818-S Single Base Substitution C-T INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN1416-S.SNP.2:26468591 chr02:026468591 0 W/26468591-26468591 FN1416-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-192.SNP.2:26477655 chr02:026477655 0 W/26477655-26477655 FN-192 Single Base Substitution T-C INTRON HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN3820-S.SNP.2:26480110 chr02:026480110 0 W/26480110-26480110 FN3820-S SNP T -> A AC=1;AN=190;BQB=0.982595;DP=2997;DP4=1404,1365,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.58677e-09;MQSB=0.992746;RPB=0.99099;SGB=46.7622;VDB=0.370442;EFF=INTRON(MODIFIER||||352|LOC_Os02g43850|protein_coding|CODING|LOC_Os02g43850.1|2|1),INTRON(MODIFIER||||282|LOC_Os02g43850|protein_coding|CODING|LOC_Os02g43850.2|1|1),INTRON(MODIFIER||||248|LOC_Os02g43850|protein_coding|CODING|LOC_Os02g43850.3|2|1),INTRON(MODIFIER||||247|LOC_Os02g43850|protein_coding|CODING|LOC_Os02g43850.4|2|1),INTRON(MODIFIER||||228|LOC_Os02g43850|protein_coding|CODING|LOC_Os02g43850.5|2|1) FN1002-S.SNP.2:26482112 chr02:026482112 0 W/26482112-26482112 FN1002-S Single Base Substitution G-T INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN_N1-202-3.SNP.2:26483874 chr02:026483874 0 W/26483874-26483874 FN_N1-202-3 Single Base Substitution A-G Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. W472-5-1.SNP.2:26484784 chr02:026484784 0 W/26484784-26484784 W472-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2299.SNP.2:26485119 chr02:026485119 0 W/26485119-26485119 FN2299 SNP C -> T AC=1;AN=192;BQB=0.752183;DP=4153;DP4=1739,2092,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66087e-09;MQSB=0.586956;RPB=0.987841;SGB=-13.0756;VDB=0.396426;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.2:26492785 chr02:026492785 0 W/26492785-26492785 FN-143 Single Base Substitution T-A INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2451.SNP.2:26492785 chr02:026492785 0 W/26492785-26492785 FN2451 SNP T -> A AC=1;AN=200;BQB=0.979065;DP=4894;DP4=2417,2256,6,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204332;MQB=3.29152e-13;MQSB=0.120555;RPB=0.93141;SGB=52.9314;VDB=0.378017;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.2:26492785 chr02:026492785 0 W/26492785-26492785 FN721-S Single Base Substitution T-A INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN_812-4-1.SNP.2:26493215 chr02:026493215 0 W/26493215-26493215 FN_812-4-1 Single Base Substitution G-A Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2459.SNP.2:26499034 chr02:026499034 0 W/26499034-26499034 FN2459 SNP T -> C AC=2;AN=200;BQB=0.992945;DP=4379;DP4=1933,1752,14,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.16578e-17;MQSB=0.878844;RPB=0.840942;SGB=-4.03268;VDB=0.79091;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E89G|160|LOC_Os02g43880|protein_coding|CODING|LOC_Os02g43880.1|1|1) FN2423.SNP.2:26499916 chr02:026499916 0 W/26499916-26499916 FN2423 SNP C -> T AC=1;AN=200;BQB=0.998871;DP=4385;DP4=1984,2194,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.31409e-10;MQSB=0.923999;RPB=0.899679;SGB=63.4749;VDB=0.788874;EFF=INTRON(MODIFIER||||112|LOC_Os02g43890|protein_coding|CODING|LOC_Os02g43890.1|1|1) FN750-S.SNP.2:26500857 chr02:026500857 0 W/26500857-26500857 FN750-S Single Base Substitution G-T INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2648-S.SNP.2:26507445 chr02:026507445 0 W/26507445-26507445 FN2648-S SNP G -> T AC=1;AN=200;BQB=0.499274;DP=4889;DP4=2321,2329,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89992e-13;MQSB=0.987696;RPB=0.776732;SGB=86.5007;VDB=0.255758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S25Y|395|LOC_Os02g43906|protein_coding|CODING|LOC_Os02g43906.1|1|1) FN2648-S.SNP.2:26507452 chr02:026507452 0 W/26507452-26507452 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.667897;DP=4848;DP4=2335,2257,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11515e-13;MQSB=0.988828;RPB=0.746308;SGB=86.5007;VDB=0.183457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A23T|395|LOC_Os02g43906|protein_coding|CODING|LOC_Os02g43906.1|1|1) FN1585-S.SNP.2:26513812 chr02:026513812 0 W/26513812-26513812 FN1585-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os02g43920 cell division cycle protein 23, putative, expressed SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3312-S.SNP.2:26528761 chr02:026528761 0 W/26528761-26528761 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.972641;DP=3006;DP4=1470,1475,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54128e-07;MQSB=0.842017;RPB=0.921296;SGB=44.2207;VDB=0.0551731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.2:26534265 chr02:026534265 0 W/26534265-26534265 FN2357 SNP T -> A AC=2;AN=192;BQB=0.992893;DP=4900;DP4=2543,2009,32,36;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0;MQB=2.62673e-26;MQSB=0.188609;RPB=0.514081;SGB=232.255;VDB=0.613184;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.2:26549320 chr02:026549320 0 W/26549320-26549320 W247-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. W453-3-1.SNP.2:26553292 chr02:026553292 0 W/26553292-26553292 W453-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN_827-1.SNP.2:26556246 chr02:026556246 0 W/26556246-26556246 FN_827-1 Single Base Substitution C-T Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1082-S.SNP.2:26557081 chr02:026557081 0 W/26557081-26557081 FN1082-S Single Base Substitution A-G INTERGENIC HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. 705-6.SNP.2:26562511 chr02:026562511 0 W/26562511-26562511 705-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1465-S.SNP.2:26566230 chr02:026566230 0 W/26566230-26566230 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1002-S.SNP.2:26568977 chr02:026568977 0 W/26568977-26568977 FN1002-S Single Base Substitution A-G INTRON HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN855-S.SNP.2:26572083 chr02:026572083 0 W/26572083-26572083 FN855-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g44000 amino acid kinase, putative, expressed SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN1462-S.SNP.2:26586538 chr02:026586538 0 W/26586538-26586538 FN1462-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g44040 expressed protein SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN4154-S.SNP.2:26587540 chr02:026587540 0 W/26587540-26587540 FN4154-S SNP G -> A AC=1;AN=170;BQB=0.783762;DP=2671;DP4=1341,1264,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.34425e-07;MQSB=0.977844;RPB=0.988995;SGB=31.4354;VDB=0.961343;EFF=INTERGENIC(MODIFIER||||||||||1) FN-255.SNP.2:26595798 chr02:026595798 0 W/26595798-26595798 FN-255 Single Base Substitution G-C INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN2290.SNP.2:26597010 chr02:026597010 0 W/26597010-26597010 FN2290 SNP C -> T AC=2;AN=192;BQB=0.77806;DP=2785;DP4=2013,605,25,13;HOB=0.0206163;ICB=0.494846;MQ=21;MQ0F=0.184919;MQB=0.0419028;MQSB=0;RPB=0.936252;SGB=82.7652;VDB=0.999806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1590D|1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|4|1) FN3632-S.SNP.2:26600783 chr02:026600783 0 W/26600783-26600783 FN3632-S SNP G -> A AC=2;AN=190;BQB=0.925779;DP=2428;DP4=1074,1241,14,15;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0152389;MQB=0.000242133;MQSB=0.00154863;RPB=0.879685;SGB=126.511;VDB=0.618735;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T561I|1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1),SPLICE_SITE_REGION(LOW||||1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1) FN3817-S.SNP.2:26600783 chr02:026600783 0 W/26600783-26600783 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.912819;DP=3151;DP4=1406,1637,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0142812;MQB=0.0789769;MQSB=0.0379684;RPB=0.493025;SGB=46.7622;VDB=0.223321;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T561I|1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1),SPLICE_SITE_REGION(LOW||||1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1) FN4126-S.SNP.2:26600783 chr02:026600783 0 W/26600783-26600783 FN4126-S SNP G -> A AC=1;AN=182;BQB=0.998409;DP=3312;DP4=1560,1681,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.00996377;MQB=0.00718117;MQSB=0.00254423;RPB=0.997412;SGB=62.1548;VDB=0.19958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T561I|1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1),SPLICE_SITE_REGION(LOW||||1822|LOC_Os02g44070|protein_coding|CODING|LOC_Os02g44070.1|1|1) FN745-S.SNP.2:26600783 chr02:026600783 0 W/26600783-26600783 FN745-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g44070 retrotransposon protein, putative, unclassified, expressed SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN3425-S.SNP.2:26603649 chr02:026603649 0 W/26603649-26603649 FN3425-S SNP C -> T AC=1;AN=184;BQB=0.977322;DP=2038;DP4=1008,952,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0107949;MQB=0.00192261;MQSB=1.20198e-09;RPB=0.173803;SGB=35.1773;VDB=0.0605483;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.2:26606970 chr02:026606970 0 W/26606970-26606970 W674-4-1 Single Base Substitution T-G INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3376-S.SNP.2:26607085 chr02:026607085 0 W/26607085-26607085 FN3376-S SNP T -> G AC=2;AN=184;BQB=0.997896;DP=2883;DP4=1374,1247,19,27;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.70921e-20;MQSB=0.297715;RPB=0.999973;SGB=114.083;VDB=0.278744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.2:26610283 chr02:026610283 0 W/26610283-26610283 FN2317 SNP G -> A AC=1;AN=192;BQB=0.0355801;DP=2677;DP4=321,2070,4,13;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0;MQB=0.0010548;MQSB=0.0545649;RPB=0.81521;SGB=-78.8817;VDB=0.623997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.2:26619522 chr02:026619522 0 W/26619522-26619522 FN2362 SNP A -> C AC=1;AN=192;BQB=0.996465;DP=5103;DP4=2579,2192,17,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.08766e-12;MQSB=0.999707;RPB=0.0858129;SGB=-11.3826;VDB=0.844849;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.2:26627072 chr02:026627072 0 W/26627072-26627072 W591-4-1 Single Base Substitution G-T INTRON HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN838-S.SNP.2:26647246 chr02:026647246 0 W/26647246-26647246 FN838-S Single Base Substitution T-C INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2473.SNP.2:26656111 chr02:026656111 0 W/26656111-26656111 FN2473 SNP C -> T AC=2;AN=200;BQB=0.83303;DP=5300;DP4=2507,2462,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.57005e-23;MQSB=0.961927;RPB=0.851299;SGB=86.7987;VDB=0.703515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.2:26674168 chr02:026674168 0 W/26674168-26674168 FN3536-S SNP G -> A AC=1;AN=188;BQB=0.882539;DP=2685;DP4=1330,1256,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00856611;MQB=0.241627;MQSB=0.525771;RPB=0.288271;SGB=48.979;VDB=0.219635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.2:26675645 chr02:026675645 0 W/26675645-26675645 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.000175915;DP=3933;DP4=2065,1826,7,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0001643;MQSB=0.962937;RPB=0.792734;SGB=-211.762;VDB=0.803107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.2:26685008 chr02:026685008 0 W/26685008-26685008 FN2364 SNP C -> T AC=1;AN=192;BQB=0.196011;DP=4920;DP4=2232,2310,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.84242e-13;MQSB=0.827644;RPB=0.977419;SGB=16.7409;VDB=0.0979553;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q520*|1310|LOC_Os02g44124|protein_coding|CODING|LOC_Os02g44124.1|2|1);LOF=(LOC_Os02g44124|LOC_Os02g44124|1|1.00);NMD=(LOC_Os02g44124|LOC_Os02g44124|1|1.00) FN2474.SNP.2:26686963 chr02:026686963 0 W/26686963-26686963 FN2474 SNP C -> T AC=1;AN=200;BQB=0.942732;DP=4598;DP4=2176,2205,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17802e-06;MQSB=0.796444;RPB=0.966978;SGB=29.4541;VDB=0.59772;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y1077|1310|LOC_Os02g44124|protein_coding|CODING|LOC_Os02g44124.1|4|1) FN2587-S.SNP.2:26691847 chr02:026691847 0 W/26691847-26691847 FN2587-S SNP A -> G AC=1;AN=198;BQB=0.974028;DP=4062;DP4=1621,2049,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.77888e-06;MQSB=0.968729;RPB=0.997318;SGB=1.37381;VDB=0.320484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.2:26706875 chr02:026706875 0 W/26706875-26706875 FN3928-S SNP G -> A AC=1;AN=158;BQB=0.56717;DP=2609;DP4=1444,1050,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=1.26582e-06;MQSB=0.592906;RPB=0.655229;SGB=19.0798;VDB=0.99441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.2:26707038 chr02:026707038 0 W/26707038-26707038 FN2278-S SNP A -> G AC=1;AN=190;BQB=0.284185;DP=4541;DP4=2245,2014,17,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.73174e-16;MQSB=0.18991;RPB=0.296226;SGB=41.4042;VDB=0.980617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.2:26710475 chr02:026710475 0 W/26710475-26710475 FN1443-S Single Base Substitution C-A INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3846-S.SNP.2:26713013 chr02:026713013 0 W/26713013-26713013 FN3846-S SNP C -> T AC=1;AN=190;BQB=0.857677;DP=2696;DP4=1451,1168,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23782e-07;MQSB=0.855304;RPB=0.0517623;SGB=62.7569;VDB=0.182042;EFF=INTRON(MODIFIER||||958|LOC_Os02g44136|protein_coding|CODING|LOC_Os02g44136.1|3|1) FN2667-S.SNP.2:26720549 chr02:026720549 0 W/26720549-26720549 FN2667-S SNP C -> T AC=1;AN=200;BQB=0.864106;DP=4435;DP4=2256,1956,13,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00135287;MQB=1.42728e-05;MQSB=0.53653;RPB=0.703501;SGB=47.7211;VDB=0.724364;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.2:26722284 chr02:026722284 0 W/26722284-26722284 FN833-S Single Base Substitution G-A INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN-174.SNP.2:26728975 chr02:026728975 0 W/26728975-26728975 FN-174 Single Base Substitution A-C INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-173.SNP.2:26729103 chr02:026729103 0 W/26729103-26729103 FN-173 Single Base Substitution G-C INTERGENIC HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN468-S.SNP.2:26732734 chr02:026732734 0 W/26732734-26732734 FN468-S Single Base Substitution T-A INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2574-S.SNP.2:26737175 chr02:026737175 0 W/26737175-26737175 FN2574-S SNP C -> T AC=1;AN=198;BQB=0.964124;DP=3766;DP4=1743,1827,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00292087;MQB=3.48794e-05;MQSB=0.00107068;RPB=0.162261;SGB=29.3637;VDB=0.155926;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H215|397|LOC_Os02g44160|protein_coding|CODING|LOC_Os02g44160.1|1|1) FN3464-S.SNP.2:26740546 chr02:026740546 0 W/26740546-26740546 FN3464-S SNP G -> A AC=2;AN=184;BQB=0.492965;DP=2951;DP4=1550,1307,10,11;HOB=0.0215028;ICB=0.494625;MQ=24;MQ0F=0.263639;MQB=0.413809;MQSB=0;RPB=0.522878;SGB=38.4058;VDB=0.838609;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.2:26740546 chr02:026740546 0 W/26740546-26740546 FN4188-S SNP G -> A AC=2;AN=170;BQB=0.753017;DP=2099;DP4=882,1138,9,17;HOB=0.0232526;ICB=0.494188;MQ=22;MQ0F=0.329681;MQB=0.981937;MQSB=0;RPB=0.804284;SGB=79.6325;VDB=0.940154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.2:26748531 chr02:026748531 0 W/26748531-26748531 FN1133-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g44190 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2688-S.SNP.2:26761782 chr02:026761782 0 W/26761782-26761782 FN2688-S SNP A -> G AC=1;AN=200;BQB=0.999649;DP=4018;DP4=1748,1852,2,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00174216;MQB=0.143575;MQSB=2.31742e-22;RPB=0.593046;SGB=6.03876;VDB=0.237012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.2:26764388 chr02:026764388 0 W/26764388-26764388 FN3849-S SNP A -> T AC=1;AN=158;BQB=0.93508;DP=2382;DP4=1223,1090,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.81187e-07;MQSB=0.933378;RPB=0.803778;SGB=42.6978;VDB=0.724486;EFF=INTRON(MODIFIER||||260|LOC_Os02g44220|protein_coding|CODING|LOC_Os02g44220.1|3|1) FN2243-S.SNP.2:26765857 chr02:026765857 0 W/26765857-26765857 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.984329;DP=3785;DP4=1779,1748,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000730001;MQSB=0.00641598;RPB=0.837623;SGB=30.8803;VDB=0.764826;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F129|260|LOC_Os02g44220|protein_coding|CODING|LOC_Os02g44220.1|2|1) FN1030-S.SNP.2:26766881 chr02:026766881 0 W/26766881-26766881 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN1001-S.SNP.2:26770392 chr02:026770392 0 W/26770392-26770392 FN1001-S Single Base Substitution C-T INTRON HOMO SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1136-S.SNP.2:26779177 chr02:026779177 0 W/26779177-26779177 FN1136-S Single Base Substitution G-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3817-S.SNP.2:26780328 chr02:026780328 0 W/26780328-26780328 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.99204;DP=2757;DP4=875,1784,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000362713;MQB=2.1337e-06;MQSB=0.177264;RPB=0.973902;SGB=49.0954;VDB=0.870013;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.2:26785269 chr02:026785269 0 W/26785269-26785269 FN2381 SNP C -> G AC=1;AN=192;BQB=0.903435;DP=5097;DP4=2366,2399,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.59001e-19;MQSB=0.273601;RPB=0.635112;SGB=82.7652;VDB=0.392823;EFF=UTR_5_PRIME(MODIFIER||423||122|LOC_Os02g44270|protein_coding|CODING|LOC_Os02g44270.1|2|1),UTR_5_PRIME(MODIFIER||423||122|LOC_Os02g44270|protein_coding|CODING|LOC_Os02g44270.2|2|1) FN2265-S.SNP.2:26791662 chr02:026791662 0 W/26791662-26791662 FN2265-S SNP A -> T AC=1;AN=190;BQB=0.638973;DP=5349;DP4=2582,2430,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.000186951;MQB=8.94814e-08;MQSB=5.90805e-07;RPB=0.68511;SGB=44.0907;VDB=0.224938;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.2:26793926 chr02:026793926 0 W/26793926-26793926 FN-410 Single Base Substitution C-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN887-S.SNP.2:26794939 chr02:026794939 0 W/26794939-26794939 FN887-S Single Base Substitution C-T INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN4154-S.SNP.2:26801259 chr02:026801259 0 W/26801259-26801259 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.937936;DP=1711;DP4=604,849,1,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.50419e-05;MQSB=0.922942;RPB=0.468219;SGB=21.1076;VDB=0.162778;EFF=INTRON(MODIFIER||||237|LOC_Os02g44300|protein_coding|CODING|LOC_Os02g44300.1|6|1),INTRON(MODIFIER||||136|LOC_Os02g44300|protein_coding|CODING|LOC_Os02g44300.3|5|1),INTRON(MODIFIER||||118|LOC_Os02g44300|protein_coding|CODING|LOC_Os02g44300.4|6|1) FN2596-S.SNP.2:26805010 chr02:026805010 0 W/26805010-26805010 FN2596-S SNP C -> G AC=1;AN=198;BQB=0.993082;DP=4298;DP4=2050,2058,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.1159e-10;MQSB=0.891079;RPB=0.503627;SGB=86.3098;VDB=0.359085;EFF=START_GAINED(LOW||||133|LOC_Os02g44310|protein_coding|CODING|LOC_Os02g44310.1|1|1),UTR_5_PRIME(MODIFIER||77||133|LOC_Os02g44310|protein_coding|CODING|LOC_Os02g44310.1|1|1) FN1717-S.SNP.2:26805133 chr02:026805133 0 W/26805133-26805133 FN1717-S SNP T -> G AC=1;AN=188;BQB=0.427611;DP=1968;DP4=1036,876,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.55094e-08;MQSB=0.83774;RPB=0.780003;SGB=39.5276;VDB=0.932552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V16G|133|LOC_Os02g44310|protein_coding|CODING|LOC_Os02g44310.1|1|1) FN-309.SNP.2:26806669 chr02:026806669 0 W/26806669-26806669 FN-309 Single Base Substitution A-G INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-298.SNP.2:26814832 chr02:026814832 0 W/26814832-26814832 FN-298 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g44320 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2411.SNP.2:26816653 chr02:026816653 0 W/26816653-26816653 FN2411 SNP G -> A AC=1;AN=200;BQB=0.999963;DP=4665;DP4=2366,1917,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62659e-10;MQSB=0.790663;RPB=0.999176;SGB=32.0901;VDB=0.3436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.2:26819474 chr02:026819474 0 W/26819474-26819474 FN2097-S SNP A -> C AC=1;AN=168;BQB=0.639694;DP=3845;DP4=1749,2053,19,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.95898e-19;MQSB=0.977601;RPB=0.555339;SGB=-49.7502;VDB=0.434457;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.2:26819488 chr02:026819488 0 W/26819488-26819488 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN985-S.SNP.2:26835800 chr02:026835800 0 W/26835800-26835800 FN985-S Single Base Substitution T-C INTERGENIC HOMO SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3772-S.SNP.2:26838799 chr02:026838799 0 W/26838799-26838799 FN3772-S SNP G -> A AC=2;AN=190;BQB=0.953188;DP=2443;DP4=637,1644,7,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00613999;MQB=1.59938e-08;MQSB=0.950541;RPB=0.998332;SGB=28.7675;VDB=0.214913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.2:26840803 chr02:026840803 0 W/26840803-26840803 FN4141-S SNP T -> G AC=1;AN=170;BQB=0.881318;DP=2402;DP4=1110,1190,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.15348e-06;MQSB=0.927178;RPB=0.94416;SGB=52.3148;VDB=0.997806;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.2:26841170 chr02:026841170 0 W/26841170-26841170 FN997-S Single Base Substitution A-T INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN997-S.SNP.2:26841171 chr02:026841171 0 W/26841171-26841171 FN997-S Single Base Substitution C-T INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN2431.SNP.2:26847368 chr02:026847368 0 W/26847368-26847368 FN2431 SNP C -> T AC=1;AN=200;BQB=0.334112;DP=5116;DP4=2416,2480,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.09949e-08;MQSB=0.987827;RPB=0.558689;SGB=3.06925;VDB=0.739317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.2:26848277 chr02:026848277 0 W/26848277-26848277 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.988248;DP=2745;DP4=1186,1460,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84438e-14;MQSB=0.915546;RPB=0.95341;SGB=53.5365;VDB=0.343796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.2:26848475 chr02:026848475 0 W/26848475-26848475 FN2219-S SNP T -> C AC=1;AN=190;BQB=0.681639;DP=4682;DP4=2116,2233,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.84937e-17;MQSB=0.684976;RPB=0.592012;SGB=59.414;VDB=0.490132;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.2:26853646 chr02:026853646 0 W/26853646-26853646 FN1557-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1557-S.SNP.2:26853647 chr02:026853647 0 W/26853647-26853647 FN1557-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g44370 scarecrow, putative, expressed SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1435-S.SNP.2:26855381 chr02:026855381 0 W/26855381-26855381 FN1435-S Single Base Substitution T-C INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2247-S.SNP.2:26861745 chr02:026861745 0 W/26861745-26861745 FN2247-S SNP T -> C AC=2;AN=190;BQB=0.987188;DP=4533;DP4=2522,1332,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000220604;MQB=1.35902e-13;MQSB=0.0832312;RPB=0.966118;SGB=-115.667;VDB=0.290555;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.2:26865530 chr02:026865530 0 W/26865530-26865530 FN465-S Single Base Substitution G-A INTERGENIC HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3416-S.SNP.2:26871682 chr02:026871682 0 W/26871682-26871682 FN3416-S SNP T -> C AC=1;AN=184;BQB=0.863085;DP=2422;DP4=1049,1303,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.40998e-07;MQSB=0.983386;RPB=0.991423;SGB=57.786;VDB=0.221552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H1011R|1664|LOC_Os02g44380|protein_coding|CODING|LOC_Os02g44380.2|15|1) FN1506-S.SNP.2:26882862 chr02:026882862 0 W/26882862-26882862 FN1506-S Single Base Substitution A-G INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2395.SNP.2:26904219 chr02:026904219 0 W/26904219-26904219 FN2395 SNP T -> C AC=1;AN=200;BQB=0.590016;DP=4122;DP4=1895,1831,13,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0138282;MQB=0.921806;MQSB=0.0170447;RPB=0.803475;SGB=47.7211;VDB=0.290873;EFF=INTRON(MODIFIER||||124|LOC_Os02g44430|protein_coding|CODING|LOC_Os02g44430.1|2|1) FN_N1-169-1.SNP.2:26906842 chr02:026906842 0 W/26906842-26906842 FN_N1-169-1 Single Base Substitution C-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN972-S.SNP.2:26908528 chr02:026908528 0 W/26908528-26908528 FN972-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g44440 retrotransposon protein, putative, unclassified, expressed SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1409-S.SNP.2:26914955 chr02:026914955 0 W/26914955-26914955 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2214-S.SNP.2:26917155 chr02:026917155 0 W/26917155-26917155 FN2214-S SNP C -> T AC=2;AN=190;BQB=0.788825;DP=4851;DP4=2480,1974,35,20;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00535972;MQB=2.17481e-17;MQSB=0.221055;RPB=0.999851;SGB=66.2662;VDB=0.0713624;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.2:26926306 chr02:026926306 0 W/26926306-26926306 FN185-2_3_4 SNP T -> A AC=1;AN=188;BQB=0.973214;DP=1793;DP4=803,952,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.68076e-07;MQSB=0.937779;RPB=0.997028;SGB=39.8925;VDB=0.315489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N290Y|779|LOC_Os02g44490|protein_coding|CODING|LOC_Os02g44490.1|1|1) FN919-S.SNP.2:26935420 chr02:026935420 0 W/26935420-26935420 FN919-S Single Base Substitution T-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN1488-S.SNP.2:26939545 chr02:026939545 0 W/26939545-26939545 FN1488-S Single Base Substitution T-C INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2792-S.SNP.2:26946745 chr02:026946745 0 W/26946745-26946745 FN2792-S SNP A -> C AC=1;AN=198;BQB=0.0882135;DP=4022;DP4=1829,2036,17,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63971e-13;MQSB=0.599062;RPB=0.999374;SGB=65.3149;VDB=0.866246;EFF=INTRON(MODIFIER||||652|LOC_Os02g44510|protein_coding|CODING|LOC_Os02g44510.1|9|1) FN_812-4-1.SNP.2:26959886 chr02:026959886 0 W/26959886-26959886 FN_812-4-1 Single Base Substitution A-G Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN-233.SNP.2:26963475 chr02:026963475 0 W/26963475-26963475 FN-233 Single Base Substitution A-G INTRON HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1661-S.SNP.2:26970858 chr02:026970858 0 W/26970858-26970858 FN1661-S Single Base Substitution G-A INTERGENIC Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1522-S.SNP.2:26973565 chr02:026973565 0 W/26973565-26973565 FN1522-S Single Base Substitution T-C INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN3678-S.SNP.2:26975605 chr02:026975605 0 W/26975605-26975605 FN3678-S SNP G -> A AC=2;AN=190;BQB=0.673325;DP=1614;DP4=529,944,8,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000619579;MQB=1.1522e-06;MQSB=2.39126e-06;RPB=0.13821;SGB=64.5316;VDB=0.710969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.2:26981972 chr02:026981972 0 W/26981972-26981972 FN2311 SNP T -> A AC=1;AN=192;BQB=0.402474;DP=4990;DP4=2447,2255,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02412e-12;MQSB=0.965883;RPB=0.868896;SGB=68.2948;VDB=0.074364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.2:26988451 chr02:026988451 0 W/26988451-26988451 FN2377 SNP A -> G AC=1;AN=192;BQB=0.0199435;DP=5358;DP4=2754,2225,20,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.50858e-23;MQSB=0.959539;RPB=0.651667;SGB=158.755;VDB=0.000623156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.2:26988452 chr02:026988452 0 W/26988452-26988452 FN2377 SNP T -> C AC=1;AN=192;BQB=0.472696;DP=5369;DP4=2791,2273,22,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.61108e-25;MQSB=0.935071;RPB=0.737615;SGB=82.7652;VDB=0.00104827;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.2:26988453 chr02:026988453 0 W/26988453-26988453 FN2377 SNP A -> T AC=1;AN=192;BQB=0.301281;DP=5372;DP4=2787,2253,21,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.66291e-25;MQSB=0.908679;RPB=0.808028;SGB=41.7705;VDB=0.00156255;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.2:26991100 chr02:026991100 0 W/26991100-26991100 FN806-S Single Base Substitution T-C INTRON HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3287-S.SNP.2:26991356 chr02:026991356 0 W/26991356-26991356 FN3287-S SNP G -> T AC=2;AN=184;BQB=0.757301;DP=2788;DP4=1365,1311,15,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.723e-12;MQSB=0.905846;RPB=0.0853081;SGB=107.526;VDB=0.596425;EFF=INTRON(MODIFIER||||186|LOC_Os02g44550|protein_coding|CODING|LOC_Os02g44550.1|6|1) FN1119-S.SNP.2:26996105 chr02:026996105 0 W/26996105-26996105 FN1119-S Single Base Substitution T-A INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2779-S.SNP.2:26996199 chr02:026996199 0 W/26996199-26996199 FN2779-S SNP G -> C AC=1;AN=198;BQB=0.999461;DP=4373;DP4=2323,1791,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.5475e-18;MQSB=0.930787;RPB=0.899291;SGB=30.086;VDB=0.10109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.2:26999246 chr02:026999246 0 W/26999246-26999246 FN2272-S SNP T -> A AC=1;AN=190;BQB=0.792471;DP=5082;DP4=2290,2447,19,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21522e-22;MQSB=0.927647;RPB=0.611565;SGB=97.7221;VDB=0.677823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:27004765 chr02:027004765 0 W/27004765-27004765 FN2572-S Single Base Substitution C-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3935-S.SNP.2:27011228 chr02:027011228 0 W/27011228-27011228 FN3935-S SNP A -> G AC=2;AN=158;BQB=0.94015;DP=2524;DP4=1322,1080,17,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.57734e-19;MQSB=0.997285;RPB=0.735313;SGB=73.5771;VDB=0.569341;EFF=UTR_5_PRIME(MODIFIER||4||618|LOC_Os02g44570|protein_coding|CODING|LOC_Os02g44570.2|2|1),UTR_5_PRIME(MODIFIER||4||618|LOC_Os02g44570|protein_coding|CODING|LOC_Os02g44570.1|2|1) FN4314-S.SNP.2:27021959 chr02:027021959 0 W/27021959-27021959 FN4314-S SNP A -> T AC=2;AN=170;BQB=0.959783;DP=2792;DP4=1278,1391,19,24;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.92726e-24;MQSB=0.900457;RPB=0.911066;SGB=90.7208;VDB=0.153128;EFF=UTR_3_PRIME(MODIFIER||986||791|LOC_Os02g44590|protein_coding|CODING|LOC_Os02g44590.1|1|1) FN2295.SNP.2:27037453 chr02:027037453 0 W/27037453-27037453 FN2295 SNP G -> A AC=1;AN=192;BQB=0.606333;DP=4871;DP4=2304,2314,21,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.38373e-19;MQSB=0.627371;RPB=0.0247423;SGB=114.631;VDB=0.115289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.2:27041565 chr02:027041565 0 W/27041565-27041565 FN3443-S SNP G -> A AC=2;AN=184;BQB=0.226908;DP=3135;DP4=1596,1407,21,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.21475e-12;MQSB=0.840804;RPB=0.93383;SGB=-42.4471;VDB=0.606283;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.2:27042432 chr02:027042432 0 W/27042432-27042432 FN-246 Single Base Substitution A-T INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN1376-S.SNP.2:27042943 chr02:027042943 0 W/27042943-27042943 FN1376-S Single Base Substitution T-A INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN1473-S.SNP.2:27042944 chr02:027042944 0 W/27042944-27042944 FN1473-S Single Base Substitution A-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN886-S.SNP.2:27043449 chr02:027043449 0 W/27043449-27043449 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1717-S.SNP.2:27044753 chr02:027044753 0 W/27044753-27044753 FN1717-S SNP T -> A AC=1;AN=188;BQB=0.0259878;DP=2595;DP4=1486,1031,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10796e-09;MQSB=0.75767;RPB=0.00644714;SGB=-98.724;VDB=0.198677;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I101N|289|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I101N|220|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I101N|289|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.2|2|1) FN1717-S.SNP.2:27044754 chr02:027044754 0 W/27044754-27044754 FN1717-S SNP C -> A AC=1;AN=188;BQB=0.0203375;DP=2585;DP4=1489,1027,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03291e-10;MQSB=0.778288;RPB=0.0758798;SGB=13.2547;VDB=0.119903;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I101|289|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I101|220|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.3|1|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I101|289|LOC_Os02g44630|protein_coding|CODING|LOC_Os02g44630.2|2|1) FN1176-S.SNP.2:27045527 chr02:027045527 0 W/27045527-27045527 FN1176-S Single Base Substitution T-C INTRON HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN530-S.SNP.2:27050609 chr02:027050609 0 W/27050609-27050609 FN530-S Single Base Substitution T-A INTRON HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN-64.SNP.2:27051025 chr02:027051025 0 W/27051025-27051025 FN-64 Single Base Substitution A-G INTRON HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-64.SNP.2:27052677 chr02:027052677 0 W/27052677-27052677 FN-64 Single Base Substitution G-C INTRON HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-181.SNP.2:27054360 chr02:027054360 0 W/27054360-27054360 FN-181 Single Base Substitution A-C INTRON HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-255.SNP.2:27055361 chr02:027055361 0 W/27055361-27055361 FN-255 Single Base Substitution C-T INTRON HOMO SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN2125-S.SNP.2:27055819 chr02:027055819 0 W/27055819-27055819 FN2125-S SNP T -> C AC=1;AN=168;BQB=0.952057;DP=2330;DP4=1173,1107,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06844e-06;MQSB=0.693052;RPB=0.628067;SGB=1.32907;VDB=0.36087;EFF=INTRON(MODIFIER||||894|LOC_Os02g44642|protein_coding|CODING|LOC_Os02g44642.1|5|1) FN3319-S.SNP.2:27056831 chr02:027056831 0 W/27056831-27056831 FN3319-S SNP T -> G AC=1;AN=184;BQB=0.715138;DP=2905;DP4=1310,1388,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00172117;MQB=0.000308543;MQSB=0.983802;RPB=0.830128;SGB=53.2642;VDB=0.0301551;EFF=INTRON(MODIFIER||||894|LOC_Os02g44642|protein_coding|CODING|LOC_Os02g44642.1|5|1) FN1236-S.SNP.2:27059614 chr02:027059614 0 W/27059614-27059614 FN1236-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN4109-S.SNP.2:27066271 chr02:027066271 0 W/27066271-27066271 FN4109-S SNP A -> T AC=2;AN=182;BQB=0.879104;DP=3597;DP4=1663,1858,10,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.31665e-11;MQSB=0.999955;RPB=0.860184;SGB=56.6929;VDB=0.72625;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.2:27066272 chr02:027066272 0 W/27066272-27066272 FN4109-S SNP A -> T AC=2;AN=182;BQB=0.988092;DP=3611;DP4=1615,1851,10,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.15333e-12;MQSB=0.99794;RPB=0.946854;SGB=33.1875;VDB=0.581131;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.2:27069883 chr02:027069883 0 W/27069883-27069883 FN446-S Single Base Substitution C-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2272-S.SNP.2:27072079 chr02:027072079 0 W/27072079-27072079 FN2272-S SNP G -> A AC=1;AN=190;BQB=0.872997;DP=3153;DP4=1501,1448,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000317158;MQB=1.85657e-12;MQSB=0.736773;RPB=0.968409;SGB=59.414;VDB=0.876846;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.2:27075907 chr02:027075907 0 W/27075907-27075907 FN752-S Single Base Substitution T-C INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN-142.SNP.2:27076671 chr02:027076671 0 W/27076671-27076671 FN-142 Single Base Substitution A-G INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3549-S.SNP.2:27087180 chr02:027087180 0 W/27087180-27087180 FN3549-S SNP C -> T AC=1;AN=188;BQB=0.953929;DP=3112;DP4=1714,1344,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27385e-05;MQSB=0.923656;RPB=0.998285;SGB=30.8063;VDB=0.5;EFF=START_GAINED(LOW||||82|LOC_Os02g44704|protein_coding|CODING|LOC_Os02g44704.1|1|1),START_GAINED(LOW||||82|LOC_Os02g44704|protein_coding|CODING|LOC_Os02g44704.2|1|1),UTR_5_PRIME(MODIFIER||2072||82|LOC_Os02g44704|protein_coding|CODING|LOC_Os02g44704.1|1|1),UTR_5_PRIME(MODIFIER||2072||82|LOC_Os02g44704|protein_coding|CODING|LOC_Os02g44704.2|1|1) FN_812-4-1.SNP.2:27088131 chr02:027088131 0 W/27088131-27088131 FN_812-4-1 Single Base Substitution A-G Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN-245.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN-245 Single Base Substitution G-A INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-370.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN-370 Single Base Substitution G-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-390.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN-390 Single Base Substitution G-A INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-78.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN-78 Single Base Substitution G-A INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2165-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.691282;DP=3472;DP4=1596,1805,22,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.29311e-19;MQSB=0.993106;RPB=0.982245;SGB=-208.578;VDB=0.818961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN2578-S SNP G -> A AC=2;AN=198;BQB=0.680134;DP=4544;DP4=2098,2181,8,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.70575e-12;MQSB=0.989992;RPB=0.950267;SGB=17.325;VDB=0.940081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN3372-S SNP G -> A AC=2;AN=184;BQB=0.979117;DP=3476;DP4=1607,1727,21,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18829e-20;MQSB=0.930801;RPB=0.947543;SGB=123.793;VDB=0.262532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN3549-S SNP G -> A AC=2;AN=188;BQB=0.916751;DP=3259;DP4=1475,1695,9,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.35112e-11;MQSB=0.922351;RPB=0.481369;SGB=89.8686;VDB=0.0363857;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN416-S Single Base Substitution G-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN759-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN759-S Single Base Substitution G-A INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN831-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN831-S Single Base Substitution G-A INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN872-S.SNP.2:27088884 chr02:027088884 0 W/27088884-27088884 FN872-S Single Base Substitution G-A INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2645-S.SNP.2:27090682 chr02:027090682 0 W/27090682-27090682 FN2645-S SNP A -> T AC=2;AN=200;BQB=0.379857;DP=5441;DP4=2462,2709,29,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.78701e-34;MQSB=0.998369;RPB=0.945206;SGB=84.9329;VDB=0.967561;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.2:27102845 chr02:027102845 0 W/27102845-27102845 FN3545-S SNP T -> C AC=2;AN=188;BQB=0.897365;DP=2892;DP4=1247,1445,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.38366e-12;MQSB=0.999746;RPB=0.528698;SGB=19.4279;VDB=0.683539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.2:27110518 chr02:027110518 0 W/27110518-27110518 FN3422-S SNP T -> C AC=1;AN=184;BQB=0.996454;DP=3200;DP4=1582,1363,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03975e-10;MQSB=0.976184;RPB=0.768409;SGB=8.32411;VDB=0.339658;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y28C|337|LOC_Os02g44740|protein_coding|CODING|LOC_Os02g44740.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y28C|271|LOC_Os02g44740|protein_coding|CODING|LOC_Os02g44740.2|1|1) FN1512-S.SNP.2:27115408 chr02:027115408 0 W/27115408-27115408 FN1512-S Single Base Substitution A-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3345-S.SNP.2:27116024 chr02:027116024 0 W/27116024-27116024 FN3345-S SNP A -> G AC=1;AN=184;BQB=0.853025;DP=3973;DP4=2144,1593,15,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.37229e-10;MQSB=0.859892;RPB=0.78153;SGB=56.8786;VDB=0.390865;EFF=INTRON(MODIFIER||||96|LOC_Os02g44760|protein_coding|CODING|LOC_Os02g44760.1|1|1) FN1519-S.SNP.2:27118368 chr02:027118368 0 W/27118368-27118368 FN1519-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g44770 uncharacterized mscS family protein, putative, expressed SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1519-S.SNP.2:27118369 chr02:027118369 0 W/27118369-27118369 FN1519-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN-311.SNP.2:27124800 chr02:027124800 0 W/27124800-27124800 FN-311 Single Base Substitution G-C INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN565-S.SNP.2:27130995 chr02:027130995 0 W/27130995-27130995 FN565-S Single Base Substitution C-A INTERGENIC HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2455.SNP.2:27140871 chr02:027140871 0 W/27140871-27140871 FN2455 SNP G -> A AC=1;AN=200;BQB=0.0596435;DP=4355;DP4=2052,2032,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.72147e-10;MQSB=0.999916;RPB=0.733606;SGB=45.1159;VDB=0.109271;EFF=INTERGENIC(MODIFIER||||||||||1) FN1000-S.SNP.2:27143392 chr02:027143392 0 W/27143392-27143392 FN1000-S Single Base Substitution G-A INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-368.SNP.2:27144774 chr02:027144774 0 W/27144774-27144774 FN-368 Single Base Substitution C-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN2597-S.SNP.2:27148022 chr02:027148022 0 W/27148022-27148022 FN2597-S SNP A -> C AC=1;AN=198;BQB=0.900594;DP=4016;DP4=2033,1808,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000249004;MQB=3.45876e-11;MQSB=0.622253;RPB=0.464383;SGB=54.5295;VDB=0.954597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.2:27148179 chr02:027148179 0 W/27148179-27148179 FN1416-S Single Base Substitution C-T INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-188.SNP.2:27156125 chr02:027156125 0 W/27156125-27156125 FN-188 Single Base Substitution A-G INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3637-S.SNP.2:27160305 chr02:027160305 0 W/27160305-27160305 FN3637-S SNP T -> A AC=1;AN=190;BQB=0.765984;DP=2898;DP4=1615,1153,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55693e-08;MQSB=0.985604;RPB=0.999897;SGB=28.7675;VDB=0.643624;EFF=INTRON(MODIFIER||||362|LOC_Os02g44860|protein_coding|CODING|LOC_Os02g44860.1|1|1) FN2360.SNP.2:27160934 chr02:027160934 0 W/27160934-27160934 FN2360 SNP A -> G AC=1;AN=192;BQB=0.465111;DP=5133;DP4=2527,2174,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.30192e-12;MQSB=0.64903;RPB=0.612863;SGB=-12.5113;VDB=0.472095;EFF=INTRON(MODIFIER||||362|LOC_Os02g44860|protein_coding|CODING|LOC_Os02g44860.1|1|1) FN1102-S.SNP.2:27162096 chr02:027162096 0 W/27162096-27162096 FN1102-S Single Base Substitution G-A INTRON HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3832-S.SNP.2:27168502 chr02:027168502 0 W/27168502-27168502 FN3832-S SNP C -> T AC=2;AN=190;BQB=0.910705;DP=2969;DP4=1222,1616,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.4477e-18;MQSB=0.593178;RPB=0.876576;SGB=100.07;VDB=0.00792068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.2:27168503 chr02:027168503 0 W/27168503-27168503 FN3832-S SNP C -> T AC=2;AN=190;BQB=0.429936;DP=2962;DP4=1199,1610,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.47661e-19;MQSB=0.681922;RPB=0.972705;SGB=140.173;VDB=0.00452386;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.2:27172870 chr02:027172870 0 W/27172870-27172870 FN1509-S Single Base Substitution A-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3639-S.SNP.2:27174342 chr02:027174342 0 W/27174342-27174342 FN3639-S SNP A -> G AC=1;AN=190;BQB=0.999001;DP=2516;DP4=1002,1291,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7091e-08;MQSB=0.99992;RPB=0.810732;SGB=23.6597;VDB=0.758724;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.2:27174724 chr02:027174724 0 W/27174724-27174724 FN999-S Single Base Substitution C-T INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2211-S.SNP.2:27175801 chr02:027175801 0 W/27175801-27175801 FN2211-S SNP G -> A AC=1;AN=190;BQB=0.107121;DP=3903;DP4=2058,1383,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.57278e-06;MQSB=0.270767;RPB=0.994785;SGB=53.6492;VDB=0.666103;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.2:27197808 chr02:027197808 0 W/27197808-27197808 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2485.SNP.2:27205565 chr02:027205565 0 W/27205565-27205565 FN2485 SNP T -> A AC=2;AN=200;BQB=0.964608;DP=4679;DP4=2138,2264,20,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6046e-19;MQSB=0.973014;RPB=0.650669;SGB=123.188;VDB=0.33801;EFF=INTRON(MODIFIER||||368|LOC_Os02g44900|protein_coding|CODING|LOC_Os02g44900.1|2|1) FN2130-S.SNP.2:27211470 chr02:027211470 0 W/27211470-27211470 FN2130-S SNP T -> A AC=1;AN=168;BQB=0.103066;DP=3193;DP4=1750,1402,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.46209e-10;MQSB=0.995751;RPB=0.584362;SGB=-40.0741;VDB=0.256421;EFF=INTRON(MODIFIER||||475|LOC_Os02g44910|protein_coding|CODING|LOC_Os02g44910.1|2|1) FN2130-S.SNP.2:27211471 chr02:027211471 0 W/27211471-27211471 FN2130-S SNP A -> T AC=1;AN=168;BQB=0.938852;DP=3209;DP4=1765,1404,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5904e-10;MQSB=0.998905;RPB=0.461009;SGB=31.908;VDB=0.0454667;EFF=INTRON(MODIFIER||||475|LOC_Os02g44910|protein_coding|CODING|LOC_Os02g44910.1|2|1) FN-339.SNP.2:27218353 chr02:027218353 0 W/27218353-27218353 FN-339 Single Base Substitution G-A INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN4110-S.SNP.2:27233611 chr02:027233611 0 W/27233611-27233611 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.961063;DP=2499;DP4=1123,1293,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0020008;MQB=0.0959537;MQSB=0.0168113;RPB=0.983727;SGB=30.5793;VDB=0.0562549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.2:27250184 chr02:027250184 0 W/27250184-27250184 FN-290 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3110-S.SNP.2:27264840 chr02:027264840 0 W/27264840-27264840 FN3110-S SNP C -> T AC=1;AN=184;BQB=0.955379;DP=2982;DP4=1364,1488,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.2189e-15;MQSB=0.99403;RPB=0.969606;SGB=103.004;VDB=0.897951;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.2:27264907 chr02:027264907 0 W/27264907-27264907 FN1575-S Single Base Substitution G-A INTERGENIC Homo SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3529-S.SNP.2:27266860 chr02:027266860 0 W/27266860-27266860 FN3529-S SNP C -> G AC=1;AN=188;BQB=0.979617;DP=2450;DP4=1271,1129,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.9813e-07;MQSB=0.943207;RPB=0.404454;SGB=44.4357;VDB=0.213347;EFF=INTRON(MODIFIER||||497|LOC_Os02g45010|protein_coding|CODING|LOC_Os02g45010.1|5|1) FN1734-S.SNP.2:27272004 chr02:027272004 0 W/27272004-27272004 FN1734-S SNP C -> A AC=1;AN=188;BQB=0.6389;DP=3784;DP4=1879,1863,6,18;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0118922;MQB=2.21788e-09;MQSB=3.19538e-15;RPB=0.961492;SGB=17.8846;VDB=0.0961333;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.2:27272494 chr02:027272494 0 W/27272494-27272494 FN725-S Single Base Substitution A-G INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN941-S.SNP.2:27283146 chr02:027283146 0 W/27283146-27283146 FN941-S Single Base Substitution C-T INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1158-S.SNP.2:27296795 chr02:027296795 0 W/27296795-27296795 FN1158-S Single Base Substitution C-G INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2537-S.SNP.2:27298600 chr02:027298600 0 W/27298600-27298600 FN2537-S SNP T -> A AC=1;AN=198;BQB=0.836708;DP=4088;DP4=1937,1934,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.61632e-06;MQSB=0.999686;RPB=0.526823;SGB=29.3637;VDB=0.948925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N419Y|572|LOC_Os02g45040|protein_coding|CODING|LOC_Os02g45040.1|1|1) FN2580-S.SNP.2:27309900 chr02:027309900 0 W/27309900-27309900 FN2580-S SNP T -> A AC=1;AN=198;BQB=0.912277;DP=4061;DP4=2074,1679,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20215e-06;MQSB=0.000933632;RPB=0.963246;SGB=18.9639;VDB=0.0940961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.2:27312124 chr02:027312124 0 W/27312124-27312124 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.0438884;DP=2584;DP4=1241,1026,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47948e-06;MQSB=0.528345;RPB=0.23278;SGB=8.77275;VDB=0.622247;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.2:27314215 chr02:027314215 0 W/27314215-27314215 FN3513-S SNP T -> A AC=1;AN=188;BQB=0.804298;DP=2678;DP4=1240,1361,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.34734e-07;MQSB=0.95238;RPB=0.561251;SGB=35.9843;VDB=0.131806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.2:27325666 chr02:027325666 0 W/27325666-27325666 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.623785;DP=2463;DP4=1255,1163,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29913e-05;MQSB=0.999987;RPB=0.353171;SGB=15.7097;VDB=0.855219;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.2:27326682 chr02:027326682 0 W/27326682-27326682 FN-136 Single Base Substitution T-C INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN621-S.SNP.2:27332593 chr02:027332593 0 W/27332593-27332593 FN621-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g45070 PINHEAD, putative, expressed SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3901-S.SNP.2:27336153 chr02:027336153 0 W/27336153-27336153 FN3901-S SNP C -> A AC=1;AN=158;BQB=0.747094;DP=2539;DP4=1322,1105,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.9111e-07;MQSB=0.976433;RPB=0.933107;SGB=37.4429;VDB=0.377677;EFF=SPLICE_SITE_DONOR(HIGH||||1082|LOC_Os02g45070|protein_coding|CODING|LOC_Os02g45070.1|2|1),SPLICE_SITE_DONOR(HIGH||||1066|LOC_Os02g45070|protein_coding|CODING|LOC_Os02g45070.2|2|1),INTRON(MODIFIER||||1082|LOC_Os02g45070|protein_coding|CODING|LOC_Os02g45070.1|2|1),INTRON(MODIFIER||||1066|LOC_Os02g45070|protein_coding|CODING|LOC_Os02g45070.2|2|1);LOF=(LOC_Os02g45070|LOC_Os02g45070|2|1.00) W22-2-1.SNP.2:27345152 chr02:027345152 0 W/27345152-27345152 W22-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2102-S.SNP.2:27358030 chr02:027358030 0 W/27358030-27358030 FN2102-S SNP G -> A AC=2;AN=168;BQB=0.71874;DP=3281;DP4=1547,1669,15,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20074e-18;MQSB=0.992671;RPB=0.995137;SGB=58.647;VDB=0.393717;EFF=UTR_3_PRIME(MODIFIER||957||199|LOC_Os02g45100|protein_coding|CODING|LOC_Os02g45100.1|1|1) FN2102-S.SNP.2:27358031 chr02:027358031 0 W/27358031-27358031 FN2102-S SNP G -> T AC=2;AN=168;BQB=0.696407;DP=3272;DP4=1537,1664,16,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.70545e-16;MQSB=0.977618;RPB=0.708038;SGB=-9.34108;VDB=0.533174;EFF=UTR_3_PRIME(MODIFIER||956||199|LOC_Os02g45100|protein_coding|CODING|LOC_Os02g45100.1|1|1) FN2102-S.SNP.2:27358048 chr02:027358048 0 W/27358048-27358048 FN2102-S SNP G -> T AC=2;AN=168;BQB=0.187875;DP=3285;DP4=1499,1717,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.34312e-21;MQSB=0.99949;RPB=0.900381;SGB=32.807;VDB=0.980868;EFF=UTR_3_PRIME(MODIFIER||939||199|LOC_Os02g45100|protein_coding|CODING|LOC_Os02g45100.1|1|1) FN2711-S.SNP.2:27364675 chr02:027364675 0 W/27364675-27364675 FN2711-S SNP G -> T AC=1;AN=200;BQB=0.415107;DP=5140;DP4=2596,2263,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.07951e-15;MQSB=0.99121;RPB=0.988211;SGB=50.3263;VDB=0.359913;EFF=INTRON(MODIFIER||||706|LOC_Os02g45110|protein_coding|CODING|LOC_Os02g45110.1|4|1) FN3716-S.SNP.2:27374058 chr02:027374058 0 W/27374058-27374058 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.971966;DP=3014;DP4=1556,1370,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19267e-08;MQSB=0.939873;RPB=0.156406;SGB=53.6492;VDB=0.0538396;EFF=INTRON(MODIFIER||||612|LOC_Os02g45130|protein_coding|CODING|LOC_Os02g45130.1|4|1),INTRON(MODIFIER||||551|LOC_Os02g45130|protein_coding|CODING|LOC_Os02g45130.2|2|1) FN3515-S.SNP.2:27379355 chr02:027379355 0 W/27379355-27379355 FN3515-S SNP T -> C AC=2;AN=188;BQB=0.950023;DP=3659;DP4=1904,1393,20,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.27189e-19;MQSB=0.271311;RPB=0.619907;SGB=-5.22045;VDB=0.793932;EFF=INTRON(MODIFIER||||163|LOC_Os02g45140|protein_coding|CODING|LOC_Os02g45140.1|1|1) FN3515-S.SNP.2:27379357 chr02:027379357 0 W/27379357-27379357 FN3515-S SNP C -> A AC=2;AN=188;BQB=0.999999;DP=3668;DP4=2095,1432,20,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000272628;MQB=7.24276e-17;MQSB=0.152075;RPB=0.743682;SGB=99.7635;VDB=0.778854;EFF=INTRON(MODIFIER||||163|LOC_Os02g45140|protein_coding|CODING|LOC_Os02g45140.1|1|1) FN-9.SNP.2:27394609 chr02:027394609 0 W/27394609-27394609 FN-9 Single Base Substitution C-T INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN1435-S.SNP.2:27396825 chr02:027396825 0 W/27396825-27396825 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2689-S.SNP.2:27401174 chr02:027401174 0 W/27401174-27401174 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.878765;DP=4857;DP4=2144,2156,14,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000617665;MQB=2.79603e-09;MQSB=0.0128282;RPB=0.205987;SGB=-38.869;VDB=0.949853;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.2:27402699 chr02:027402699 0 W/27402699-27402699 FN3411-S SNP G -> T AC=1;AN=184;BQB=0.951031;DP=2921;DP4=1509,1313,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.14749e-07;MQSB=0.949654;RPB=0.230007;SGB=44.2207;VDB=0.865496;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.2:27405717 chr02:027405717 0 W/27405717-27405717 FN-294 Single Base Substitution A-G INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3927-S.SNP.2:27421742 chr02:027421742 0 W/27421742-27421742 FN3927-S SNP C -> A AC=1;AN=158;BQB=0.95196;DP=2499;DP4=1152,1225,16,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.25931e-18;MQSB=0.89561;RPB=0.935171;SGB=91.3541;VDB=0.909219;EFF=UTR_3_PRIME(MODIFIER||154||792|LOC_Os02g45170|protein_coding|CODING|LOC_Os02g45170.1|10|1) FN3927-S.SNP.2:27421800 chr02:027421800 0 W/27421800-27421800 FN3927-S SNP A -> T AC=1;AN=158;BQB=0.941675;DP=2652;DP4=1334,1226,13,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.03071e-16;MQSB=0.955056;RPB=0.632688;SGB=74.5068;VDB=0.0534735;EFF=UTR_3_PRIME(MODIFIER||212||792|LOC_Os02g45170|protein_coding|CODING|LOC_Os02g45170.1|10|1) FN2085-S.SNP.2:27424698 chr02:027424698 0 W/27424698-27424698 FN2085-S SNP C -> G AC=2;AN=168;BQB=0.951293;DP=4058;DP4=1960,2008,25,39;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.34942e-33;MQSB=0.891835;RPB=0.837196;SGB=-63.9798;VDB=0.664522;EFF=INTRON(MODIFIER||||157|LOC_Os02g45180|protein_coding|CODING|LOC_Os02g45180.1|2|1) FN2678-S.SNP.2:27429010 chr02:027429010 0 W/27429010-27429010 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.442907;DP=4747;DP4=2559,1866,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71725e-11;MQSB=0.986009;RPB=0.999956;SGB=86.5007;VDB=0.0435222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.2:27430097 chr02:027430097 0 W/27430097-27430097 FN3710-S SNP T -> G AC=1;AN=190;BQB=0.865782;DP=3005;DP4=1435,1493,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000178653;MQSB=0.998961;RPB=0.889179;SGB=30.8803;VDB=0.419626;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.2:27432863 chr02:027432863 0 W/27432863-27432863 FN837-S Single Base Substitution A-G INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN845-S.SNP.2:27437745 chr02:027437745 0 W/27437745-27437745 FN845-S Single Base Substitution G-T INTRON HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN845-S.SNP.2:27437749 chr02:027437749 0 W/27437749-27437749 FN845-S Single Base Substitution T-A INTRON HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN810-S.SNP.2:27453321 chr02:027453321 0 W/27453321-27453321 FN810-S Single Base Substitution T-G INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2172-S.SNP.2:27465057 chr02:027465057 0 W/27465057-27465057 FN2172-S SNP C -> T AC=1;AN=168;BQB=0.181193;DP=2379;DP4=1024,1310,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000420345;MQB=9.9688e-06;MQSB=0.947113;RPB=0.708109;SGB=-15.8033;VDB=0.715252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2162-S.SNP.2:27467431 chr02:027467431 0 W/27467431-27467431 FN2162-S SNP G -> A AC=2;AN=168;BQB=0.0141553;DP=3236;DP4=1451,1679,14,28;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.05338e-07;MQSB=0.746992;RPB=0.549628;SGB=-51.4578;VDB=0.182279;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.2:27468024 chr02:027468024 0 W/27468024-27468024 FN1509-S Single Base Substitution G-C INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN-263.SNP.2:27469449 chr02:027469449 0 W/27469449-27469449 FN-263 Single Base Substitution C-T INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3763-S.SNP.2:27477482 chr02:027477482 0 W/27477482-27477482 FN3763-S SNP C -> T AC=2;AN=190;BQB=0.999613;DP=3061;DP4=1306,1645,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.35559e-12;MQSB=0.913769;RPB=0.402956;SGB=90.0802;VDB=0.575898;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.2:27482838 chr02:027482838 0 W/27482838-27482838 FN818-S Single Base Substitution T-A INTRON HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN773-S.SNP.2:27489842 chr02:027489842 0 W/27489842-27489842 FN773-S Single Base Substitution C-T INTRON HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3354-S.SNP.2:27498980 chr02:027498980 0 W/27498980-27498980 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.964796;DP=2621;DP4=1154,1356,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.67726e-09;MQSB=0.997158;RPB=0.847277;SGB=57.786;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.2:27504531 chr02:027504531 0 W/27504531-27504531 FN-341 Single Base Substitution C-T INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2499.SNP.2:27511754 chr02:027511754 0 W/27511754-27511754 FN2499 SNP G -> T AC=1;AN=200;BQB=0.583387;DP=4507;DP4=2140,2053,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221877;MQB=0.00962355;MQSB=0.874345;RPB=0.433132;SGB=11.2488;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.2:27513553 chr02:027513553 0 W/27513553-27513553 FN3554-S SNP G -> A AC=1;AN=188;BQB=0.932611;DP=3046;DP4=1700,1249,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00590939;MQB=0.0561887;MQSB=0.0367829;RPB=0.854239;SGB=48.979;VDB=0.0332878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.2:27513727 chr02:027513727 0 W/27513727-27513727 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.995254;DP=2825;DP4=1148,1450,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000353982;MQB=5.69001e-06;MQSB=0.00727048;RPB=0.60583;SGB=58.7391;VDB=0.207118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.2:27515342 chr02:027515342 0 W/27515342-27515342 FN2300 SNP C -> A AC=1;AN=192;BQB=0.99997;DP=4737;DP4=2303,2098,5,4;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0664978;MQB=0.977201;MQSB=4.76441e-44;RPB=0.484816;SGB=35.5177;VDB=0.176359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.2:27515822 chr02:027515822 0 W/27515822-27515822 FN2423 SNP C -> A AC=1;AN=200;BQB=0.320411;DP=4787;DP4=2203,2353,8,12;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.243785;MQB=0.999902;MQSB=0;RPB=0.791133;SGB=37.3004;VDB=0.103823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN1188-S Single Base Substitution G-C INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1630-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN1630-S Single Base Substitution G-C INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2491.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN2491 SNP G -> C AC=1;AN=200;BQB=0.888295;DP=5050;DP4=2570,2181,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.95385e-13;MQSB=0.609989;RPB=0.856192;SGB=72.7161;VDB=0.0899975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN2749-S SNP G -> C AC=1;AN=200;BQB=0.888085;DP=5219;DP4=2658,2320,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45115e-12;MQSB=0.218834;RPB=0.673076;SGB=69.1109;VDB=0.915657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN3390-S SNP G -> C AC=2;AN=184;BQB=0.988526;DP=3021;DP4=1588,1344,13,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.64368e-12;MQSB=0.133488;RPB=0.281711;SGB=93.9603;VDB=0.457223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN3417-S SNP G -> C AC=1;AN=184;BQB=0.616865;DP=2934;DP4=1573,1287,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.89216e-11;MQSB=0.0701446;RPB=0.129746;SGB=75.8731;VDB=0.229923;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN4078-S SNP G -> C AC=2;AN=182;BQB=0.990591;DP=3132;DP4=1679,1376,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.74692e-15;MQSB=0.106752;RPB=0.99962;SGB=84.7797;VDB=0.811352;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.2:27517627 chr02:027517627 0 W/27517627-27517627 FN4156-S SNP G -> C AC=1;AN=170;BQB=0.903707;DP=2616;DP4=1411,1150,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000106079;MQSB=0.10625;RPB=0.858614;SGB=34.5445;VDB=0.0802296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.2:27524755 chr02:027524755 0 W/27524755-27524755 FN-189 Single Base Substitution A-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3439-S.SNP.2:27526249 chr02:027526249 0 W/27526249-27526249 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.614051;DP=3226;DP4=1448,1410,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000309981;MQB=6.14065e-06;MQSB=0.617125;RPB=0.973205;SGB=18.2315;VDB=0.866996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.2:27527420 chr02:027527420 0 W/27527420-27527420 FN2649-S SNP T -> G AC=1;AN=200;BQB=0.254048;DP=5081;DP4=2492,2278,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.25177e-23;MQSB=0.905952;RPB=0.891134;SGB=76.378;VDB=0.763637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.2:27527421 chr02:027527421 0 W/27527421-27527421 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.872326;DP=5079;DP4=2427,2303,19,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.09643e-23;MQSB=0.903317;RPB=0.426754;SGB=-1.612;VDB=0.786732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.2:27527423 chr02:027527423 0 W/27527423-27527423 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.798069;DP=5059;DP4=2435,2284,23,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67999e-23;MQSB=0.946986;RPB=0.717178;SGB=-1.00683;VDB=0.813965;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.2:27529231 chr02:027529231 0 W/27529231-27529231 FN-250 Single Base Substitution A-T INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN2500.SNP.2:27529231 chr02:027529231 0 W/27529231-27529231 FN2500 SNP A -> T AC=1;AN=200;BQB=0.728253;DP=5287;DP4=2476,2510,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.60609e-16;MQSB=0.904165;RPB=0.957672;SGB=58.1418;VDB=0.738136;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.2:27534566 chr02:027534566 0 W/27534566-27534566 FN_809-6-1 Single Base Substitution G-A HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2649-S.SNP.2:27541766 chr02:027541766 0 W/27541766-27541766 FN2649-S SNP C -> G AC=1;AN=200;BQB=0.668578;DP=4241;DP4=2093,1940,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.9259e-10;MQSB=0.831441;RPB=0.169914;SGB=51.0851;VDB=0.120057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.2:27547848 chr02:027547848 0 W/27547848-27547848 FN-125 Single Base Substitution G-A INTERGENIC HOMO SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-75.SNP.2:27547848 chr02:027547848 0 W/27547848-27547848 FN-75 Single Base Substitution G-A INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1271-S.SNP.2:27547848 chr02:027547848 0 W/27547848-27547848 FN1271-S Single Base Substitution G-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2617-S.SNP.2:27547848 chr02:027547848 0 W/27547848-27547848 FN2617-S SNP G -> A AC=2;AN=198;BQB=0.00568619;DP=4345;DP4=1920,2040,28,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.70044e-32;MQSB=0.920987;RPB=0.903363;SGB=183.954;VDB=0.526598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.2:27548605 chr02:027548605 0 W/27548605-27548605 FN1222-S Single Base Substitution T-C START_GAINED HET LOC_Os02g45320 OsFBX58 - F-box domain containing protein, expressed SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2216-S.SNP.2:27555315 chr02:027555315 0 W/27555315-27555315 FN2216-S SNP T -> C AC=1;AN=190;BQB=0.586702;DP=4513;DP4=2138,2140,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000221582;MQB=3.98032e-05;MQSB=0.0103319;RPB=0.803722;SGB=30.8803;VDB=0.414968;EFF=INTRON(MODIFIER||||311|LOC_Os02g45330|protein_coding|CODING|LOC_Os02g45330.1|1|1) FN3293-S.SNP.2:27555969 chr02:027555969 0 W/27555969-27555969 FN3293-S SNP T -> C AC=1;AN=184;BQB=0.860202;DP=3267;DP4=1356,1768,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09991e-05;MQSB=0.989605;RPB=0.994291;SGB=48.7425;VDB=0.371164;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.2:27557104 chr02:027557104 0 W/27557104-27557104 FN999-S Single Base Substitution G-A INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2554-S.SNP.2:27566678 chr02:027566678 0 W/27566678-27566678 FN2554-S SNP A -> G AC=1;AN=198;BQB=0.948149;DP=4320;DP4=2090,2082,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.5892e-13;MQSB=0.893598;RPB=0.616759;SGB=61.7198;VDB=0.0598974;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A458|459|LOC_Os02g45344|protein_coding|CODING|LOC_Os02g45344.1|8|1) FN1363-S.SNP.2:27570091 chr02:027570091 0 W/27570091-27570091 FN1363-S Single Base Substitution C-A INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3914-S.SNP.2:27570241 chr02:027570241 0 W/27570241-27570241 FN3914-S SNP T -> C AC=1;AN=158;BQB=0.596799;DP=2737;DP4=1352,1284,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.06199e-08;MQSB=0.949311;RPB=0.998831;SGB=2.08615;VDB=0.747415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.2:27580454 chr02:027580454 0 W/27580454-27580454 FN1737-S SNP T -> C AC=1;AN=188;BQB=0.949417;DP=2732;DP4=1304,1379,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.0900439;MQB=0.991573;MQSB=8.3669e-39;RPB=0.211346;SGB=8.62479;VDB=0.14227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T712A|1605|LOC_Os02g45370|protein_coding|CODING|LOC_Os02g45370.1|4|1) FN4069-S.SNP.2:27580796 chr02:027580796 0 W/27580796-27580796 FN4069-S SNP A -> C AC=1;AN=182;BQB=0.955073;DP=4235;DP4=2346,1758,18,18;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0540732;MQB=1.06095e-07;MQSB=8.39848e-05;RPB=0.99951;SGB=116.377;VDB=0.896704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S598A|1605|LOC_Os02g45370|protein_coding|CODING|LOC_Os02g45370.1|4|1) FN3466-S.SNP.2:27584883 chr02:027584883 0 W/27584883-27584883 FN3466-S SNP T -> A AC=1;AN=184;BQB=0.922689;DP=3480;DP4=1586,1688,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0091954;MQB=0.0496836;MQSB=1.80883e-25;RPB=0.816018;SGB=46.3132;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.2:27589050 chr02:027589050 0 W/27589050-27589050 FN2640-S SNP T -> A AC=2;AN=200;BQB=0.813284;DP=2744;DP4=649,1917,4,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.06009e-12;MQSB=0.864369;RPB=0.87911;SGB=86.5007;VDB=0.569158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.2:27589543 chr02:027589543 0 W/27589543-27589543 FN1400-S Single Base Substitution A-G INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1638-S.SNP.2:27589543 chr02:027589543 0 W/27589543-27589543 FN1638-S Single Base Substitution A-G INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN897-S.SNP.2:27589543 chr02:027589543 0 W/27589543-27589543 FN897-S Single Base Substitution A-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3851-S.SNP.2:27594507 chr02:027594507 0 W/27594507-27594507 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.99986;DP=2170;DP4=1071,993,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.93074e-09;MQSB=0.985906;RPB=0.975999;SGB=23.8187;VDB=0.317166;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.2:27602523 chr02:027602523 0 W/27602523-27602523 FN460-S Single Base Substitution T-G START_GAINED HET LOC_Os02g45390 RING-H2 finger protein, putative, expressed SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1464-S.SNP.2:27603032 chr02:027603032 0 W/27603032-27603032 FN1464-S Single Base Substitution A-G INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN759-S.SNP.2:27604565 chr02:027604565 0 W/27604565-27604565 FN759-S Single Base Substitution T-C INTRON HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1606-S.SNP.2:27604955 chr02:027604955 0 W/27604955-27604955 FN1606-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1488-S.SNP.2:27609006 chr02:027609006 0 W/27609006-27609006 FN1488-S Single Base Substitution C-A INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3493-S.SNP.2:27609089 chr02:027609089 0 W/27609089-27609089 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.884051;DP=2703;DP4=1285,1277,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.03667e-06;MQSB=0.967297;RPB=0.257833;SGB=35.7479;VDB=0.35082;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.2:27609799 chr02:027609799 0 W/27609799-27609799 FN957-S Single Base Substitution A-G INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1102-S.SNP.2:27610261 chr02:027610261 0 W/27610261-27610261 FN1102-S Single Base Substitution A-C INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1237-S.SNP.2:27613581 chr02:027613581 0 W/27613581-27613581 FN1237-S Single Base Substitution T-C INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2597-S.SNP.2:27615608 chr02:027615608 0 W/27615608-27615608 FN2597-S SNP T -> A AC=1;AN=198;BQB=0.845007;DP=3624;DP4=1792,1539,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.02708e-13;MQSB=0.90931;RPB=0.834933;SGB=-10.2651;VDB=0.412233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.2:27636160 chr02:027636160 0 W/27636160-27636160 FN1170-S Single Base Substitution C-T INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2698-S.SNP.2:27638002 chr02:027638002 0 W/27638002-27638002 FN2698-S SNP C -> A AC=2;AN=200;BQB=0.922357;DP=5166;DP4=2338,2385,46,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.4013e-45;MQSB=0.999895;RPB=0.17208;SGB=235.849;VDB=0.531138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.2:27639282 chr02:027639282 0 W/27639282-27639282 FN2483 SNP A -> G AC=1;AN=200;BQB=0.915893;DP=5115;DP4=2270,2437,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69883e-12;MQSB=0.982792;RPB=0.980759;SGB=34.6953;VDB=0.198427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.2:27657431 chr02:027657431 0 W/27657431-27657431 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.359187;DP=4075;DP4=2219,1557,16,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000490798;MQB=3.29731e-11;MQSB=0.110769;RPB=0.529537;SGB=64.5316;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.2:27667797 chr02:027667797 0 W/27667797-27667797 FN1634-S Single Base Substitution A-G INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2614-S.SNP.2:27670386 chr02:027670386 0 W/27670386-27670386 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.999997;DP=4078;DP4=1634,2008,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65761e-05;MQSB=0.945446;RPB=0.972385;SGB=25.7687;VDB=0.470678;EFF=UTR_3_PRIME(MODIFIER||220||177|LOC_Os02g45490|protein_coding|CODING|LOC_Os02g45490.1|1|1),UTR_3_PRIME(MODIFIER||220||177|LOC_Os02g45490|protein_coding|CODING|LOC_Os02g45490.2|1|1),UTR_3_PRIME(MODIFIER||220||177|LOC_Os02g45490|protein_coding|CODING|LOC_Os02g45490.3|1|1),UTR_3_PRIME(MODIFIER||220||177|LOC_Os02g45490|protein_coding|CODING|LOC_Os02g45490.4|1|1) FN548-S.SNP.2:27673156 chr02:027673156 0 W/27673156-27673156 FN548-S Single Base Substitution T-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN548-S.SNP.2:27673157 chr02:027673157 0 W/27673157-27673157 FN548-S Single Base Substitution C-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN792-S.SNP.2:27679910 chr02:027679910 0 W/27679910-27679910 FN792-S Single Base Substitution G-C INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN850-S.SNP.2:27682714 chr02:027682714 0 W/27682714-27682714 FN850-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g45510 transposon protein, putative, unclassified, expressed SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN1650-S.SNP.2:27684006 chr02:027684006 0 W/27684006-27684006 FN1650-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN540-S.SNP.2:27684885 chr02:027684885 0 W/27684885-27684885 FN540-S Single Base Substitution G-T INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN322-S.SNP.2:27688055 chr02:027688055 0 W/27688055-27688055 FN322-S Single Base Substitution G-A INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN322-S.SNP.2:27688056 chr02:027688056 0 W/27688056-27688056 FN322-S Single Base Substitution C-T INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3862-S.SNP.2:27690239 chr02:027690239 0 W/27690239-27690239 FN3862-S SNP G -> A AC=1;AN=158;BQB=0.783418;DP=2498;DP4=1186,1217,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00360288;MQB=1.66894e-05;MQSB=0.126139;RPB=0.9997;SGB=42.6978;VDB=0.765622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.2:27690240 chr02:027690240 0 W/27690240-27690240 FN3862-S SNP T -> A AC=1;AN=158;BQB=0.962763;DP=2492;DP4=1155,1206,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00361156;MQB=1.38071e-06;MQSB=0.125308;RPB=0.955637;SGB=34.0735;VDB=0.699824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.2:27693495 chr02:027693495 0 W/27693495-27693495 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.848327;DP=3997;DP4=2039,1773,16,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.18676e-12;MQSB=0.999226;RPB=0.68839;SGB=44.9151;VDB=0.746121;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.2:27699691 chr02:027699691 0 W/27699691-27699691 FN389-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g45520 uncharacterized membrane protein, putative, expressed SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3429-S.SNP.2:27709281 chr02:027709281 0 W/27709281-27709281 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.977799;DP=3412;DP4=1624,1672,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.51143e-10;MQSB=0.764826;RPB=0.533313;SGB=80.3949;VDB=0.73684;EFF=START_GAINED(LOW||||311|LOC_Os02g45540|protein_coding|CODING|LOC_Os02g45540.1|1|1),UTR_5_PRIME(MODIFIER||217||311|LOC_Os02g45540|protein_coding|CODING|LOC_Os02g45540.1|1|1) FN1712-S.SNP.2:27711966 chr02:027711966 0 W/27711966-27711966 FN1712-S SNP C -> T AC=1;AN=188;BQB=0.830045;DP=4175;DP4=2022,2118,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.21597e-11;MQSB=0.962723;RPB=0.898208;SGB=-11.1967;VDB=0.648037;EFF=INTRON(MODIFIER||||311|LOC_Os02g45540|protein_coding|CODING|LOC_Os02g45540.1|1|1) FN2299.SNP.2:27712803 chr02:027712803 0 W/27712803-27712803 FN2299 SNP C -> T AC=1;AN=192;BQB=0.85655;DP=5083;DP4=2742,2055,16,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.10799e-13;MQSB=0.995271;RPB=0.909648;SGB=39.1713;VDB=0.84712;EFF=UTR_3_PRIME(MODIFIER||59||311|LOC_Os02g45540|protein_coding|CODING|LOC_Os02g45540.1|2|1) FN1337-S.SNP.2:27725443 chr02:027725443 0 W/27725443-27725443 FN1337-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN343-S.SNP.2:27728978 chr02:027728978 0 W/27728978-27728978 FN343-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN1486-S.SNP.2:27730411 chr02:027730411 0 W/27730411-27730411 FN1486-S Single Base Substitution G-A INTERGENIC Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN669-S.SNP.2:27730661 chr02:027730661 0 W/27730661-27730661 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3443-S.SNP.2:27731573 chr02:027731573 0 W/27731573-27731573 FN3443-S SNP C -> T AC=1;AN=184;BQB=0.947541;DP=2545;DP4=995,1392,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45475e-06;MQSB=0.667737;RPB=0.405481;SGB=18.2315;VDB=0.644969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.2:27735755 chr02:027735755 0 W/27735755-27735755 FN1394-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2447.SNP.2:27737101 chr02:027737101 0 W/27737101-27737101 FN2447 SNP T -> C AC=1;AN=200;BQB=0.950375;DP=4036;DP4=2571,1150,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00024777;MQB=6.23237e-11;MQSB=0.163607;RPB=0.765879;SGB=61.9006;VDB=0.354443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D691G|789|LOC_Os02g45590|protein_coding|CODING|LOC_Os02g45590.1|5|1) FN1255-S.SNP.2:27743059 chr02:027743059 0 W/27743059-27743059 FN1255-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN495-S.SNP.2:27750667 chr02:027750667 0 W/27750667-27750667 FN495-S Single Base Substitution A-G INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3554-S.SNP.2:27752804 chr02:027752804 0 W/27752804-27752804 FN3554-S SNP C -> T AC=1;AN=188;BQB=0.95709;DP=3417;DP4=1483,1856,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.98194e-12;MQSB=0.999844;RPB=0.721657;SGB=89.8686;VDB=0.125533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.2:27753953 chr02:027753953 0 W/27753953-27753953 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.41277;DP=3907;DP4=2545,1145,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000255951;MQB=4.75445e-06;MQSB=0.909762;RPB=0.810926;SGB=28.9929;VDB=0.0789411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.2:27753954 chr02:027753954 0 W/27753954-27753954 FN2252-S SNP T -> A AC=1;AN=190;BQB=0.226372;DP=3899;DP4=2498,1109,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000256476;MQB=8.55019e-05;MQSB=0.933773;RPB=0.148822;SGB=-15.9914;VDB=0.0153741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.2:27754604 chr02:027754604 0 W/27754604-27754604 FN1334-S Single Base Substitution C-T INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3881-S.SNP.2:27757218 chr02:027757218 0 W/27757218-27757218 FN3881-S SNP T -> C AC=2;AN=158;BQB=0.999913;DP=2601;DP4=1439,1074,13,8;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.68269e-09;MQSB=0.00626052;RPB=0.873913;SGB=86.3921;VDB=0.0100276;EFF=INTRON(MODIFIER||||217|LOC_Os02g45630|protein_coding|CODING|LOC_Os02g45630.1|2|1) FN2260-S.SNP.2:27758451 chr02:027758451 0 W/27758451-27758451 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.898911;DP=3091;DP4=1344,1488,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00474288;MQSB=0.910452;RPB=0.836683;SGB=26.3271;VDB=0.685092;EFF=INTRON(MODIFIER||||217|LOC_Os02g45630|protein_coding|CODING|LOC_Os02g45630.1|1|1) FN515-S.SNP.2:27760999 chr02:027760999 0 W/27760999-27760999 FN515-S Single Base Substitution T-A INTRON HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN3331-S.SNP.2:27764313 chr02:027764313 0 W/27764313-27764313 FN3331-S SNP A -> G AC=1;AN=184;BQB=0.415913;DP=3017;DP4=1227,1627,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30304e-06;MQSB=0.828508;RPB=0.997166;SGB=-0.80661;VDB=0.158054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.2:27770706 chr02:027770706 0 W/27770706-27770706 FN1357-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3715-S.SNP.2:27779915 chr02:027779915 0 W/27779915-27779915 FN3715-S SNP G -> T AC=1;AN=190;BQB=0.993307;DP=2892;DP4=1382,1398,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23095e-12;MQSB=0.833189;RPB=0.49325;SGB=60.9777;VDB=0.692331;EFF=INTRON(MODIFIER||||291|LOC_Os02g45670|protein_coding|CODING|LOC_Os02g45670.1|2|1) FN1049-S.SNP.2:27790555 chr02:027790555 0 W/27790555-27790555 FN1049-S Single Base Substitution C-T INTRON HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN-375.SNP.2:27791562 chr02:027791562 0 W/27791562-27791562 FN-375 Single Base Substitution C-T INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN1153-S.SNP.2:27791562 chr02:027791562 0 W/27791562-27791562 FN1153-S Single Base Substitution C-T INTRON HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1435-S.SNP.2:27791562 chr02:027791562 0 W/27791562-27791562 FN1435-S Single Base Substitution C-T INTRON HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN571-S.SNP.2:27791562 chr02:027791562 0 W/27791562-27791562 FN571-S Single Base Substitution C-T INTRON HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2530-S.SNP.2:27793085 chr02:027793085 0 W/27793085-27793085 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.544178;DP=3561;DP4=1753,1633,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00112328;MQB=5.52013e-09;MQSB=0.352834;RPB=0.520609;SGB=-12.6455;VDB=0.145105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.2:27822416 chr02:027822416 0 W/27822416-27822416 FN2299 SNP T -> A AC=1;AN=192;BQB=0.985597;DP=4668;DP4=2588,1858,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=15;MQ0F=0.392245;MQB=0.162734;MQSB=0;RPB=0.307448;SGB=54.0374;VDB=0.358863;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.2:27830074 chr02:027830074 0 W/27830074-27830074 FN3567-S SNP T -> C AC=1;AN=188;BQB=0.916425;DP=2843;DP4=1292,1372,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99881e-11;MQSB=0.916288;RPB=0.4365;SGB=41.3359;VDB=0.471712;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.2:27830085 chr02:027830085 0 W/27830085-27830085 FN739-S Single Base Substitution G-A INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2274-S.SNP.2:27832725 chr02:027832725 0 W/27832725-27832725 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.892831;DP=4365;DP4=2261,1847,19,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07647e-17;MQSB=0.523842;RPB=0.940921;SGB=121.394;VDB=0.165419;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.2:27844461 chr02:027844461 0 W/27844461-27844461 FN1113-S Single Base Substitution C-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3301-S.SNP.2:27848389 chr02:027848389 0 W/27848389-27848389 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.823647;DP=3224;DP4=1448,1660,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55721e-08;MQSB=0.998667;RPB=0.323333;SGB=71.3514;VDB=0.265995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.2:27848966 chr02:027848966 0 W/27848966-27848966 FN1436-S Single Base Substitution C-T INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN-245.SNP.2:27849371 chr02:027849371 0 W/27849371-27849371 FN-245 Single Base Substitution C-T INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3435-S.SNP.2:27849688 chr02:027849688 0 W/27849688-27849688 FN3435-S SNP T -> A AC=1;AN=184;BQB=0.497389;DP=3400;DP4=1219,1986,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.78425e-07;MQSB=0.855278;RPB=0.593217;SGB=15.7097;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.2:27849689 chr02:027849689 0 W/27849689-27849689 FN3435-S SNP T -> A AC=1;AN=184;BQB=0.699715;DP=3393;DP4=1268,1984,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09569e-05;MQSB=0.693746;RPB=0.722322;SGB=10.6662;VDB=0.698224;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.2:27859241 chr02:027859241 0 W/27859241-27859241 FN-132 Single Base Substitution C-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2558-S.SNP.2:27862598 chr02:027862598 0 W/27862598-27862598 FN2558-S SNP G -> A AC=2;AN=198;BQB=0.648544;DP=4125;DP4=1881,1979,20,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000242424;MQB=1.58075e-23;MQSB=0.997227;RPB=0.877358;SGB=99.4126;VDB=0.630805;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.2:27864615 chr02:027864615 0 W/27864615-27864615 FN830-S Single Base Substitution G-A INTERGENIC HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN3815-S.SNP.2:27867175 chr02:027867175 0 W/27867175-27867175 FN3815-S SNP C -> T AC=1;AN=190;BQB=0.270878;DP=3342;DP4=1489,1720,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000255872;MQSB=0.801028;RPB=0.690107;SGB=36.1006;VDB=0.209572;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.2:27868540 chr02:027868540 0 W/27868540-27868540 FN1392-S Single Base Substitution A-G INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN4002-S.SNP.2:27886738 chr02:027886738 0 W/27886738-27886738 FN4002-S SNP G -> A AC=1;AN=168;BQB=0.990691;DP=2008;DP4=1041,908,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.62339e-06;MQSB=0.999991;RPB=0.987068;SGB=43.3113;VDB=0.489965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.2:27887488 chr02:027887488 0 W/27887488-27887488 FN3935-S SNP A -> G AC=2;AN=158;BQB=0.95292;DP=2552;DP4=1308,1102,21,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.47895e-15;MQSB=0.362142;RPB=0.652146;SGB=56.991;VDB=0.410788;EFF=UTR_3_PRIME(MODIFIER||125||164|LOC_Os02g45780|protein_coding|CODING|LOC_Os02g45780.1|1|1) FN2637-S.SNP.2:27890958 chr02:027890958 0 W/27890958-27890958 FN2637-S SNP G -> T AC=1;AN=200;BQB=0.853549;DP=4613;DP4=2125,2270,3,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.50411e-09;MQSB=0.895803;RPB=0.987776;SGB=47.4799;VDB=0.719748;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.2:27898828 chr02:027898828 0 W/27898828-27898828 FN_1017-1 Single Base Substitution G-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3426-S.SNP.2:27899851 chr02:027899851 0 W/27899851-27899851 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.957534;DP=2957;DP4=1573,1303,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.33137e-08;MQSB=0.882859;RPB=0.636061;SGB=53.2642;VDB=0.311296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R440C|769|LOC_Os02g45800|protein_coding|CODING|LOC_Os02g45800.1|3|1) FN1736-S.SNP.2:27901341 chr02:027901341 0 W/27901341-27901341 FN1736-S SNP C -> G AC=2;AN=188;BQB=0.996918;DP=2209;DP4=1034,1122,9,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.96637e-15;MQSB=0.886522;RPB=0.996665;SGB=89.1337;VDB=0.767647;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G38|769|LOC_Os02g45800|protein_coding|CODING|LOC_Os02g45800.1|1|1) FN-108.SNP.2:27902576 chr02:027902576 0 W/27902576-27902576 FN-108 Single Base Substitution C-T INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3678-S.SNP.2:27912912 chr02:027912912 0 W/27912912-27912912 FN3678-S SNP C -> A AC=1;AN=190;BQB=0.872404;DP=2482;DP4=1309,1096,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.46082e-08;MQSB=0.976006;RPB=0.739016;SGB=49.0954;VDB=0.892694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H15N|215|LOC_Os02g45830|protein_coding|CODING|LOC_Os02g45830.1|1|1) FN751-S.SNP.2:27913978 chr02:027913978 0 W/27913978-27913978 FN751-S Single Base Substitution A-C INTRON HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3528-S.SNP.2:27914044 chr02:027914044 0 W/27914044-27914044 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.828344;DP=3313;DP4=1659,1551,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.2107e-16;MQSB=0.997949;RPB=0.410931;SGB=112.585;VDB=0.134146;EFF=INTRON(MODIFIER||||215|LOC_Os02g45830|protein_coding|CODING|LOC_Os02g45830.1|1|1) FN2210-S.SNP.2:27914905 chr02:027914905 0 W/27914905-27914905 FN2210-S SNP T -> C AC=2;AN=190;BQB=0.332209;DP=3559;DP4=1679,1517,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.2173e-11;MQSB=0.404055;RPB=0.168292;SGB=60.9777;VDB=0.555673;EFF=INTRON(MODIFIER||||215|LOC_Os02g45830|protein_coding|CODING|LOC_Os02g45830.1|1|1) FN3650-S.SNP.2:27916382 chr02:027916382 0 W/27916382-27916382 FN3650-S SNP C -> A AC=1;AN=190;BQB=0.981252;DP=2809;DP4=1469,1200,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72364e-12;MQSB=0.852628;RPB=0.821461;SGB=60.9777;VDB=0.790722;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.2:27916539 chr02:027916539 0 W/27916539-27916539 FN517-S Single Base Substitution A-G INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN919-S.SNP.2:27920633 chr02:027920633 0 W/27920633-27920633 FN919-S Single Base Substitution T-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN4036-S.SNP.2:27929064 chr02:027929064 0 W/27929064-27929064 FN4036-S SNP A -> T AC=1;AN=168;BQB=0.870268;DP=2060;DP4=1146,753,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.68029e-06;MQSB=0.998116;RPB=0.882967;SGB=27.8864;VDB=0.418569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.2:27930667 chr02:027930667 0 W/27930667-27930667 FN3463-S SNP G -> A AC=2;AN=184;BQB=0.957899;DP=2183;DP4=957,1119,9,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.29991e-11;MQSB=0.89094;RPB=0.62529;SGB=67.4439;VDB=0.0585033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.2:27932549 chr02:027932549 0 W/27932549-27932549 FN3978-S SNP T -> C AC=2;AN=168;BQB=0.748049;DP=2719;DP4=1314,1278,9,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.90364e-13;MQSB=0.969928;RPB=0.958643;SGB=83.1885;VDB=0.836469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.2:27935863 chr02:027935863 0 W/27935863-27935863 FN2358 SNP G -> A AC=1;AN=192;BQB=0.443273;DP=5356;DP4=2799,2205,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.41208e-07;MQSB=0.224743;RPB=0.412916;SGB=-16.4617;VDB=0.869447;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.2:27936918 chr02:027936918 0 W/27936918-27936918 FN369-S Single Base Substitution G-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN369-S.SNP.2:27936924 chr02:027936924 0 W/27936924-27936924 FN369-S Single Base Substitution G-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3841-S.SNP.2:27938534 chr02:027938534 0 W/27938534-27938534 FN3841-S SNP A -> G AC=1;AN=190;BQB=0.409616;DP=2667;DP4=1368,1210,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66e-07;MQSB=0.985583;RPB=0.269405;SGB=53.8699;VDB=0.542755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.2:27940492 chr02:027940492 0 W/27940492-27940492 FN3438-S SNP G -> T AC=2;AN=184;BQB=0.722073;DP=2379;DP4=1106,1166,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.0904e-17;MQSB=0.0980041;RPB=0.979522;SGB=116.749;VDB=0.694057;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.2:27943576 chr02:027943576 0 W/27943576-27943576 FN1721-S SNP G -> A AC=1;AN=188;BQB=0.183652;DP=4049;DP4=2207,1785,19,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63243e-13;MQSB=0.994179;RPB=0.882152;SGB=-241.905;VDB=0.332234;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.2:27949115 chr02:027949115 0 W/27949115-27949115 FN_789-2-1 Single Base Substitution T-G HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-3-1.SNP.2:27949115 chr02:027949115 0 W/27949115-27949115 FN_789-3-1 Single Base Substitution T-G INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN-382.SNP.2:27949123 chr02:027949123 0 W/27949123-27949123 FN-382 Single Base Substitution G-C INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN853-S.SNP.2:27953600 chr02:027953600 0 W/27953600-27953600 FN853-S Single Base Substitution C-T INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3914-S.SNP.2:27959216 chr02:027959216 0 W/27959216-27959216 FN3914-S SNP T -> C AC=1;AN=158;BQB=0.993121;DP=2451;DP4=1168,1183,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.03241e-08;MQSB=0.999972;RPB=0.254257;SGB=30.704;VDB=0.157242;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.2:27959590 chr02:027959590 0 W/27959590-27959590 FN577-S Single Base Substitution C-T INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3800-S.SNP.2:27968814 chr02:027968814 0 W/27968814-27968814 FN3800-S SNP G -> A AC=2;AN=190;BQB=0.962013;DP=2722;DP4=1193,1418,13,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.37232e-15;MQSB=0.99686;RPB=0.727864;SGB=158.388;VDB=0.301286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L11F|358|LOC_Os02g45890|protein_coding|CODING|LOC_Os02g45890.1|1|1) FN-147.SNP.2:27977835 chr02:027977835 0 W/27977835-27977835 FN-147 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g45910 tRNA-splicing endonuclease positive effector-related, putative, expressed SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN1550-S.SNP.2:27983486 chr02:027983486 0 W/27983486-27983486 FN1550-S Single Base Substitution A-T INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN360-S.SNP.2:27985321 chr02:027985321 0 W/27985321-27985321 FN360-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g45920 expressed protein SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2226-S.SNP.2:27998613 chr02:027998613 0 W/27998613-27998613 FN2226-S SNP G -> A AC=1;AN=190;BQB=0.610213;DP=4691;DP4=2068,2239,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000213174;MQB=3.49257e-12;MQSB=0.932031;RPB=0.458907;SGB=78.7471;VDB=0.207577;EFF=UTR_3_PRIME(MODIFIER||289||352|LOC_Os02g45950|protein_coding|CODING|LOC_Os02g45950.1|7|1) FN3506-S.SNP.2:28011125 chr02:028011125 0 W/28011125-28011125 FN3506-S SNP T -> C AC=1;AN=188;BQB=0.998944;DP=3252;DP4=1317,1820,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.70152e-09;MQSB=0.981903;RPB=0.543811;SGB=46.6141;VDB=0.0411744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.2:28011188 chr02:028011188 0 W/28011188-28011188 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.928813;DP=4241;DP4=1999,2054,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.03975e-11;MQSB=0.905088;RPB=0.995597;SGB=42.3199;VDB=0.999795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.2:28020379 chr02:028020379 0 W/28020379-28020379 FN2753-S SNP A -> T AC=1;AN=200;BQB=0.165981;DP=4871;DP4=2421,2234,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86797e-08;MQSB=0.947927;RPB=0.858685;SGB=47.4799;VDB=0.817527;EFF=UTR_3_PRIME(MODIFIER||117||960|LOC_Os02g45980|protein_coding|CODING|LOC_Os02g45980.1|7|1) FN2239-S.SNP.2:28024685 chr02:028024685 0 W/28024685-28024685 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.991219;DP=4066;DP4=1719,2063,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000491884;MQB=2.10396e-11;MQSB=0.452554;RPB=0.61085;SGB=82.301;VDB=0.221067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R291H|682|LOC_Os02g45990|protein_coding|CODING|LOC_Os02g45990.1|6|1) FN2751-S.SNP.2:28026718 chr02:028026718 0 W/28026718-28026718 FN2751-S SNP T -> G AC=1;AN=200;BQB=0.589787;DP=4719;DP4=2323,2157,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38022e-09;MQSB=0.802299;RPB=0.78665;SGB=51.0851;VDB=0.303409;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.2:28027692 chr02:028027692 0 W/28027692-28027692 FN1419-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g46000 retrotransposon protein, putative, unclassified SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2136-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.857601;DP=2959;DP4=1820,1080,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0111524;MQB=0.0837828;MQSB=9.62045e-07;RPB=0.946782;SGB=-12.3568;VDB=0.512455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN2686-S SNP G -> A AC=2;AN=200;BQB=0.209295;DP=4566;DP4=2324,1985,19,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00569426;MQB=1.84687e-14;MQSB=2.54377e-05;RPB=0.95146;SGB=119.583;VDB=0.84512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN3711-S SNP G -> A AC=2;AN=190;BQB=0.966739;DP=2737;DP4=1322,1300,16,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00730727;MQB=1.09341e-10;MQSB=0.0880196;RPB=0.0506327;SGB=121.957;VDB=0.213956;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN4178-S SNP G -> A AC=2;AN=170;BQB=0.999282;DP=2449;DP4=1199,1162,11,12;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00694161;MQB=8.99808e-08;MQSB=0.052032;RPB=0.999499;SGB=41.8678;VDB=0.239428;EFF=INTERGENIC(MODIFIER||||||||||1) FN574-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN574-S Single Base Substitution G-A INTERGENIC HOMO SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN883-S.SNP.2:28034651 chr02:028034651 0 W/28034651-28034651 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2433.SNP.2:28035538 chr02:028035538 0 W/28035538-28035538 FN2433 SNP G -> A AC=1;AN=200;BQB=0.27186;DP=2527;DP4=1159,1134,5,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00601101;MQSB=0.880133;RPB=0.892844;SGB=25.849;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.2:28038436 chr02:028038436 0 W/28038436-28038436 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.915662;DP=2418;DP4=1163,1033,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81427e-06;MQSB=0.409097;RPB=0.967494;SGB=-2.10437;VDB=0.665619;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.2:28039792 chr02:028039792 0 W/28039792-28039792 FN-217 Single Base Substitution C-T INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1345-S.SNP.2:28040208 chr02:028040208 0 W/28040208-28040208 FN1345-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN531-S.SNP.2:28053021 chr02:028053021 0 W/28053021-28053021 FN531-S Single Base Substitution C-T INTERGENIC HET SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN1190-S.SNP.2:28074908 chr02:028074908 0 W/28074908-28074908 FN1190-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g46070 transposon protein, putative, unclassified, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1643-S.SNP.2:28078700 chr02:028078700 0 W/28078700-28078700 FN1643-S Single Base Substitution T-C INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN597-S.SNP.2:28083647 chr02:028083647 0 W/28083647-28083647 FN597-S Single Base Substitution G-C INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-76.SNP.2:28085258 chr02:028085258 0 W/28085258-28085258 FN-76 Single Base Substitution T-C INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN846-S.SNP.2:28087196 chr02:028087196 0 W/28087196-28087196 FN846-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN4181-S.SNP.2:28092901 chr02:028092901 0 W/28092901-28092901 FN4181-S SNP G -> A AC=1;AN=170;BQB=0.430339;DP=2490;DP4=1179,1207,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.00281124;MQB=0.995923;MQSB=0.99664;RPB=0.479929;SGB=27.9928;VDB=0.879703;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.2:28096852 chr02:028096852 0 W/28096852-28096852 FN558-S Single Base Substitution A-G INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4314-S.SNP.2:28102564 chr02:028102564 0 W/28102564-28102564 FN4314-S SNP G -> A AC=1;AN=170;BQB=0.984668;DP=2460;DP4=1224,1145,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.96096e-13;MQSB=0.987766;RPB=0.900354;SGB=83.4133;VDB=0.689591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.2:28131721 chr02:028131721 0 W/28131721-28131721 FN-249 Single Base Substitution A-T INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN2275-S.SNP.2:28145108 chr02:028145108 0 W/28145108-28145108 FN2275-S SNP T -> A AC=2;AN=190;BQB=0.609099;DP=4813;DP4=2194,2311,38,47;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.55266e-40;MQSB=0.0570717;RPB=0.996205;SGB=281.896;VDB=0.76575;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.2:28149650 chr02:028149650 0 W/28149650-28149650 FN-408 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN2545-S.SNP.2:28172743 chr02:028172743 0 W/28172743-28172743 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.971376;DP=4092;DP4=2112,1779,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000244379;MQB=5.31703e-11;MQSB=0.999849;RPB=0.670432;SGB=34.5346;VDB=0.954225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.2:28182669 chr02:028182669 0 W/28182669-28182669 FN2708-S SNP C -> G AC=2;AN=200;BQB=0.578874;DP=4353;DP4=1998,2051,17,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.73721e-17;MQSB=0.994928;RPB=0.894993;SGB=78.9831;VDB=0.665951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.2:28192161 chr02:028192161 0 W/28192161-28192161 FN4255-S SNP C -> A AC=2;AN=170;BQB=0.946553;DP=1994;DP4=1011,897,9,6;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.99079e-06;MQSB=0.148028;RPB=0.374205;SGB=61.2001;VDB=0.661145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.2:28193151 chr02:028193151 0 W/28193151-28193151 FN3478-S SNP C -> T AC=2;AN=184;BQB=0.96177;DP=3187;DP4=1777,1303,21,17;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.16574e-19;MQSB=9.88875e-07;RPB=0.362999;SGB=81.2762;VDB=0.0865669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.2:28195617 chr02:028195617 0 W/28195617-28195617 FN3478-S SNP T -> C AC=2;AN=184;BQB=0.726048;DP=3661;DP4=1814,1679,19,18;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0150232;MQB=3.86792e-08;MQSB=0.291971;RPB=0.94304;SGB=120.271;VDB=0.53542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.2:28196743 chr02:028196743 0 W/28196743-28196743 FN2412 SNP C -> T AC=2;AN=200;BQB=0.757975;DP=3604;DP4=1618,1588,15,17;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0324639;MQB=0.135567;MQSB=1.96979e-11;RPB=0.362163;SGB=141.763;VDB=0.551252;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.2:28197941 chr02:028197941 0 W/28197941-28197941 FN1369-S Single Base Substitution G-A INTERGENIC Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3662-S.SNP.2:28198870 chr02:028198870 0 W/28198870-28198870 FN3662-S SNP T -> A AC=1;AN=190;BQB=0.92364;DP=3078;DP4=1519,1444,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0126706;MQB=0.0787967;MQSB=0.116166;RPB=0.965613;SGB=44.5415;VDB=0.231253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D1103V|1350|LOC_Os02g46240|protein_coding|CODING|LOC_Os02g46240.1|3|1) FN1346-S.SNP.2:28203092 chr02:028203092 0 W/28203092-28203092 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1198-S.SNP.2:28204113 chr02:028204113 0 W/28204113-28204113 FN1198-S Single Base Substitution C-G INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN3814-S.SNP.2:28205289 chr02:028205289 0 W/28205289-28205289 FN3814-S SNP G -> T AC=2;AN=190;BQB=0.843169;DP=3643;DP4=1953,1568,27,11;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.151798;MQB=0.00418163;MQSB=0;RPB=0.0741883;SGB=-513.281;VDB=0.267649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.2:28207494 chr02:028207494 0 W/28207494-28207494 FN2280-S SNP G -> A AC=1;AN=190;BQB=0.946267;DP=2360;DP4=850,1264,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00169492;MQB=0.000306349;MQSB=0.247553;RPB=0.578926;SGB=43.2083;VDB=0.378999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.2:28211868 chr02:028211868 0 W/28211868-28211868 FN3839-S SNP T -> A AC=2;AN=190;BQB=0.469382;DP=2337;DP4=1108,1070,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.83808e-11;MQSB=0.548438;RPB=0.0392899;SGB=89.4087;VDB=0.735309;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.2:28211932 chr02:028211932 0 W/28211932-28211932 CW-631-3-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2606-S.SNP.2:28212535 chr02:028212535 0 W/28212535-28212535 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.75358;DP=4195;DP4=2227,1751,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71483e-05;MQSB=0.789005;RPB=0.380886;SGB=31.1689;VDB=0.452509;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|480|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|448|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|402|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|402|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.4|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|384|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.5|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T73|366|LOC_Os02g46260|protein_coding|CODING|LOC_Os02g46260.6|2|1) FN-187.SNP.2:28219376 chr02:028219376 0 W/28219376-28219376 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1068-S.SNP.2:28224672 chr02:028224672 0 W/28224672-28224672 FN1068-S Single Base Substitution A-G INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1424-S.SNP.2:28224967 chr02:028224967 0 W/28224967-28224967 FN1424-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN-118.SNP.2:28230693 chr02:028230693 0 W/28230693-28230693 FN-118 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g46310 pectinesterase, putative, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-300.SNP.2:28246625 chr02:028246625 0 W/28246625-28246625 FN-300 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g46340 RING-H2 finger protein ATL3J, putative, expressed SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN-279.SNP.2:28248407 chr02:028248407 0 W/28248407-28248407 FN-279 Single Base Substitution C-A INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2612-S.SNP.2:28257157 chr02:028257157 0 W/28257157-28257157 FN2612-S SNP A -> G AC=1;AN=198;BQB=0.968865;DP=4434;DP4=2349,1825,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00022553;MQB=7.28957e-09;MQSB=0.654677;RPB=0.990877;SGB=118.476;VDB=0.426186;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.2:28259984 chr02:028259984 0 W/28259984-28259984 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.964662;DP=2044;DP4=919,1040,11,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86206e-11;MQSB=0.409312;RPB=0.340236;SGB=105.627;VDB=0.828412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.2:28262906 chr02:028262906 0 W/28262906-28262906 FN2692-S SNP C -> T AC=1;AN=200;BQB=0.988264;DP=4798;DP4=2150,2394,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.99697e-11;MQSB=0.973072;RPB=0.640082;SGB=58.2954;VDB=0.398904;EFF=INTRON(MODIFIER||||299|LOC_Os02g46370|protein_coding|CODING|LOC_Os02g46370.1|3|1) FN-9.SNP.2:28264979 chr02:028264979 0 W/28264979-28264979 FN-9 Single Base Substitution G-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN-249.SNP.2:28265966 chr02:028265966 0 W/28265966-28265966 FN-249 Single Base Substitution C-G INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-249.SNP.2:28265973 chr02:028265973 0 W/28265973-28265973 FN-249 Single Base Substitution T-G INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1106-S.SNP.2:28272738 chr02:028272738 0 W/28272738-28272738 FN1106-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g46400 expressed protein SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3695-S.SNP.2:28281895 chr02:028281895 0 W/28281895-28281895 FN3695-S SNP C -> T AC=1;AN=190;BQB=0.999497;DP=2795;DP4=1323,1382,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21596e-07;MQSB=0.992783;RPB=0.964265;SGB=53.6492;VDB=0.62773;EFF=INTERGENIC(MODIFIER||||||||||1) FN710-S.SNP.2:28283095 chr02:028283095 0 W/28283095-28283095 FN710-S Single Base Substitution A-C INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN480-S.SNP.2:28285075 chr02:028285075 0 W/28285075-28285075 FN480-S Single Base Substitution A-G INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1759-S.SNP.2:28286475 chr02:028286475 0 W/28286475-28286475 FN1759-S SNP A -> C AC=1;AN=188;BQB=0.996908;DP=4370;DP4=2137,2192,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.4489e-11;MQSB=0.952379;RPB=0.959;SGB=-11.1967;VDB=0.458685;EFF=INTERGENIC(MODIFIER||||||||||1) FN817-S.SNP.2:28299537 chr02:028299537 0 W/28299537-28299537 FN817-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g46450 helicase conserved C-terminal domain containing protein, expressed SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN1385-S.SNP.2:28302896 chr02:028302896 0 W/28302896-28302896 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. CW-631-3-1.SNP.2:28309002 chr02:028309002 0 W/28309002-28309002 CW-631-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN3545-S.SNP.2:28310381 chr02:028310381 0 W/28310381-28310381 FN3545-S SNP T -> A AC=1;AN=188;BQB=0.998847;DP=3325;DP4=1499,1669,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.7628e-06;MQSB=0.978817;RPB=0.963214;SGB=44.4357;VDB=0.0134141;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.2:28321580 chr02:028321580 0 W/28321580-28321580 FN-241 Single Base Substitution T-A INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3657-S.SNP.2:28334233 chr02:028334233 0 W/28334233-28334233 FN3657-S SNP G -> T AC=1;AN=190;BQB=0.369636;DP=2713;DP4=1218,1423,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.31893e-05;MQSB=0.465742;RPB=0.895285;SGB=28.9929;VDB=0.882096;EFF=INTRON(MODIFIER||||80|LOC_Os02g46480|protein_coding|CODING|LOC_Os02g46480.1|1|1) FN2539-S.SNP.2:28335268 chr02:028335268 0 W/28335268-28335268 FN2539-S SNP G -> A AC=2;AN=198;BQB=0.974167;DP=4428;DP4=2178,2005,18,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.63504e-19;MQSB=0.903862;RPB=0.522999;SGB=-41.9039;VDB=0.0253597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D51N|80|LOC_Os02g46480|protein_coding|CODING|LOC_Os02g46480.1|2|1) FN1152-S.SNP.2:28335366 chr02:028335366 0 W/28335366-28335366 FN1152-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1109-S.SNP.2:28336036 chr02:028336036 0 W/28336036-28336036 FN1109-S Single Base Substitution A-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN995-S.SNP.2:28336505 chr02:028336505 0 W/28336505-28336505 FN995-S Single Base Substitution A-G INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN3799-S.SNP.2:28341003 chr02:028341003 0 W/28341003-28341003 FN3799-S SNP A -> C AC=2;AN=190;BQB=0.923157;DP=2739;DP4=1448,1209,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.93522e-17;MQSB=0.956945;RPB=0.824442;SGB=135.619;VDB=0.276572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.2:28345700 chr02:028345700 0 W/28345700-28345700 FN3598-S SNP C -> T AC=1;AN=188;BQB=0.943328;DP=2488;DP4=1096,1293,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.69948e-10;MQSB=0.750256;RPB=0.910667;SGB=64.3306;VDB=0.0791251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.2:28351533 chr02:028351533 0 W/28351533-28351533 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.992266;DP=2742;DP4=1114,1516,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9275e-07;MQSB=0.867;RPB=0.76739;SGB=44.5415;VDB=0.724486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.2:28356351 chr02:028356351 0 W/28356351-28356351 FN2438 SNP C -> T AC=2;AN=200;BQB=0.061347;DP=4825;DP4=2287,2184,25,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.02166e-36;MQSB=0.93635;RPB=0.152095;SGB=83.3278;VDB=0.336891;EFF=INTRON(MODIFIER||||438|LOC_Os02g46510|protein_coding|CODING|LOC_Os02g46510.1|1|1) FN518-S.SNP.2:28357750 chr02:028357750 0 W/28357750-28357750 FN518-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g46510 adaptor complexes medium subunit family domain containing protein, expressed SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. W598-2-1.SNP.2:28366570 chr02:028366570 0 W/28366570-28366570 W598-2-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1740-S.SNP.2:28371119 chr02:028371119 0 W/28371119-28371119 FN1740-S SNP C -> A AC=1;AN=188;BQB=0.204326;DP=3705;DP4=1981,1673,20,15;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.03275e-13;MQSB=0.0845915;RPB=0.702029;SGB=-123.291;VDB=0.693565;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.2:28371278 chr02:028371278 0 W/28371278-28371278 FN3489-S SNP C -> A AC=2;AN=184;BQB=0.978965;DP=2564;DP4=1092,1382,3,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12631e-09;MQSB=0.0198215;RPB=0.622945;SGB=80.3949;VDB=0.749777;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.2:28372268 chr02:028372268 0 W/28372268-28372268 FN687-S Single Base Substitution T-G INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1349-S.SNP.2:28372468 chr02:028372468 0 W/28372468-28372468 FN1349-S Single Base Substitution C-T INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN979-S.SNP.2:28373681 chr02:028373681 0 W/28373681-28373681 FN979-S Single Base Substitution G-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN1067-S.SNP.2:28377111 chr02:028377111 0 W/28377111-28377111 FN1067-S Single Base Substitution T-C INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN3846-S.SNP.2:28377305 chr02:028377305 0 W/28377305-28377305 FN3846-S SNP A -> T AC=1;AN=190;BQB=0.526016;DP=3073;DP4=1400,1466,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.12379e-08;MQSB=0.964124;RPB=0.851712;SGB=32.5467;VDB=0.813442;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.2:28382762 chr02:028382762 0 W/28382762-28382762 FN507-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g46540 expressed protein SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN474-S.SNP.2:28388137 chr02:028388137 0 W/28388137-28388137 FN474-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN1732-S.SNP.2:28388712 chr02:028388712 0 W/28388712-28388712 FN1732-S SNP C -> G AC=1;AN=188;BQB=0.920333;DP=3754;DP4=1790,1924,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.62022e-10;MQSB=0.885431;RPB=0.503921;SGB=-69.186;VDB=0.0741038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.2:28389313 chr02:028389313 0 W/28389313-28389313 FN2656-S SNP T -> C AC=1;AN=200;BQB=0.335108;DP=4819;DP4=2103,2390,14,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00912e-20;MQSB=0.549586;RPB=0.665231;SGB=39.9882;VDB=0.634794;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.2:28399484 chr02:028399484 0 W/28399484-28399484 FN-299 Single Base Substitution G-T INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN4101-S.SNP.2:28404825 chr02:028404825 0 W/28404825-28404825 FN4101-S SNP A -> T AC=1;AN=182;BQB=0.89483;DP=3086;DP4=1336,1635,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.4133e-06;MQSB=0.881236;RPB=0.920579;SGB=35.0899;VDB=0.182763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y710F|1233|LOC_Os02g46580|protein_coding|CODING|LOC_Os02g46580.1|7|1) FN3466-S.SNP.2:28412732 chr02:028412732 0 W/28412732-28412732 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.997533;DP=2813;DP4=1475,1257,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.06629e-10;MQSB=0.186284;RPB=0.986185;SGB=80.3949;VDB=0.527212;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.2:28414867 chr02:028414867 0 W/28414867-28414867 FN594-S Single Base Substitution G-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1142-S.SNP.2:28416326 chr02:028416326 0 W/28416326-28416326 FN1142-S Single Base Substitution G-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN-30.SNP.2:28418885 chr02:028418885 0 W/28418885-28418885 FN-30 Single Base Substitution A-G INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN405-S.SNP.2:28420769 chr02:028420769 0 W/28420769-28420769 FN405-S Single Base Substitution C-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3571-S.SNP.2:28422614 chr02:028422614 0 W/28422614-28422614 FN3571-S SNP C -> G AC=1;AN=188;BQB=0.986212;DP=3858;DP4=1754,2036,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.50596e-08;MQSB=0.999043;RPB=0.9834;SGB=58.0655;VDB=0.200115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R154P|389|LOC_Os02g46600|protein_coding|CODING|LOC_Os02g46600.1|1|1) FN_N1-150-1.SNP.2:28423728 chr02:028423728 0 W/28423728-28423728 FN_N1-150-1 Single Base Substitution A-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2594-S.SNP.2:28426520 chr02:028426520 0 W/28426520-28426520 FN2594-S SNP T -> C AC=1;AN=198;BQB=0.48984;DP=4515;DP4=2005,2227,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.52721e-11;MQSB=0.551489;RPB=0.598899;SGB=42.3199;VDB=0.0190501;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.2:28428873 chr02:028428873 0 W/28428873-28428873 FN-175 Single Base Substitution T-C INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2486.SNP.2:28428873 chr02:028428873 0 W/28428873-28428873 FN2486 SNP T -> C AC=1;AN=200;BQB=0.678629;DP=4514;DP4=1981,2162,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97981e-18;MQSB=0.870107;RPB=0.795787;SGB=105.163;VDB=0.305296;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.2:28428873 chr02:028428873 0 W/28428873-28428873 FN4095-S SNP T -> C AC=2;AN=182;BQB=0.977103;DP=3477;DP4=1485,1871,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.4029e-16;MQSB=0.938813;RPB=0.631109;SGB=53.2744;VDB=0.144891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.2:28431987 chr02:028431987 0 W/28431987-28431987 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.998923;DP=2713;DP4=612,1729,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000631058;MQSB=4.73873e-16;RPB=0.818109;SGB=32.9588;VDB=0.178358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.2:28432381 chr02:028432381 0 W/28432381-28432381 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.593467;DP=2183;DP4=932,1176,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000458085;MQB=0.000276653;MQSB=0.94615;RPB=0.999764;SGB=18.3316;VDB=0.528538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.2:28442198 chr02:028442198 0 W/28442198-28442198 FN3453-S SNP T -> A AC=1;AN=184;BQB=0.949815;DP=2855;DP4=1314,1460,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000350263;MQB=6.10805e-05;MQSB=0.411457;RPB=0.0159226;SGB=30.6558;VDB=0.0136396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.2:28442530 chr02:028442530 0 W/28442530-28442530 FN1257-S Single Base Substitution C-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN-102.SNP.2:28446021 chr02:028446021 0 W/28446021-28446021 FN-102 Single Base Substitution G-A INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1483-S.SNP.2:28453116 chr02:028453116 0 W/28453116-28453116 FN1483-S Single Base Substitution A-G INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1430-S.SNP.2:28461079 chr02:028461079 0 W/28461079-28461079 FN1430-S Single Base Substitution C-T INTRON HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2797-S.SNP.2:28465158 chr02:028465158 0 W/28465158-28465158 FN2797-S SNP A -> T AC=1;AN=198;BQB=0.738651;DP=3956;DP4=1884,1854,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.97562e-10;MQSB=0.807364;RPB=0.85563;SGB=54.5295;VDB=0.18785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L90H|121|LOC_Os02g46640|protein_coding|CODING|LOC_Os02g46640.1|5|1) FN2106-S.SNP.2:28467017 chr02:028467017 0 W/28467017-28467017 FN2106-S SNP G -> T AC=1;AN=168;BQB=0.297424;DP=2753;DP4=1224,1436,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.14113e-07;MQSB=0.990889;RPB=0.967436;SGB=-38.3665;VDB=0.203386;EFF=INTRON(MODIFIER||||121|LOC_Os02g46640|protein_coding|CODING|LOC_Os02g46640.1|1|1) FN2252-S.SNP.2:28468991 chr02:028468991 0 W/28468991-28468991 FN2252-S SNP A -> G AC=2;AN=190;BQB=0.915132;DP=5118;DP4=2253,2525,23,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.96634e-27;MQSB=0.664665;RPB=0.71785;SGB=149.825;VDB=0.156143;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.2:28478368 chr02:028478368 0 W/28478368-28478368 FN-119 Single Base Substitution A-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN907-S.SNP.2:28486718 chr02:028486718 0 W/28486718-28486718 FN907-S Single Base Substitution G-T INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2655-S.SNP.2:28491819 chr02:028491819 0 W/28491819-28491819 FN2655-S SNP G -> C AC=1;AN=200;BQB=0.661442;DP=5006;DP4=2345,2416,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63843e-18;MQSB=0.983217;RPB=0.999635;SGB=127.947;VDB=0.32457;EFF=INTRON(MODIFIER||||1264|LOC_Os02g46680|protein_coding|CODING|LOC_Os02g46680.1|3|1) FN2083-S.SNP.2:28494228 chr02:028494228 0 W/28494228-28494228 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.648278;DP=3247;DP4=907,1960,80,194;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.052048;MQB=0;MQSB=0.00503005;RPB=9.53985e-25;SGB=-2212.76;VDB=1.00653e-06;EFF=INTRON(MODIFIER||||1264|LOC_Os02g46680|protein_coding|CODING|LOC_Os02g46680.1|3|1) FN-392.SNP.2:28500411 chr02:028500411 0 W/28500411-28500411 FN-392 Single Base Substitution T-C INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN-281.SNP.2:28501472 chr02:028501472 0 W/28501472-28501472 FN-281 Single Base Substitution T-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2625-S.SNP.2:28505835 chr02:028505835 0 W/28505835-28505835 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.0490124;DP=3731;DP4=1709,1818,6,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00187617;MQB=1.77837e-05;MQSB=0.277742;RPB=0.836899;SGB=29.4849;VDB=0.549895;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.2:28509686 chr02:028509686 0 W/28509686-28509686 FN4230-S SNP C -> T AC=2;AN=170;BQB=0.994073;DP=2157;DP4=752,1339,5,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.886e-11;MQSB=0.936318;RPB=0.73471;SGB=52.0913;VDB=0.298154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.2:28514415 chr02:028514415 0 W/28514415-28514415 FN1739-S SNP G -> A AC=1;AN=188;BQB=0.0206175;DP=1645;DP4=811,777,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00171202;MQSB=0.866405;RPB=0.815116;SGB=-16.6296;VDB=0.321511;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.2:28524195 chr02:028524195 0 W/28524195-28524195 FN-21 Single Base Substitution A-C INTRON Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN2288.SNP.2:28532188 chr02:028532188 0 W/28532188-28532188 FN2288 SNP T -> C AC=1;AN=192;BQB=0.985221;DP=5189;DP4=2645,2222,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.9774e-08;MQSB=0.966462;RPB=0.393347;SGB=32.6514;VDB=0.827555;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.2:28546513 chr02:028546513 0 W/28546513-28546513 FN-158 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g46740 RWD domain containing protein, expressed SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1237-S.SNP.2:28547995 chr02:028547995 0 W/28547995-28547995 FN1237-S Single Base Substitution A-T INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3494-S.SNP.2:28564817 chr02:028564817 0 W/28564817-28564817 FN3494-S SNP T -> C AC=2;AN=184;BQB=0.965667;DP=2435;DP4=1281,1067,17,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.15674e-17;MQSB=0.985675;RPB=0.734846;SGB=125.613;VDB=0.0814629;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.2:28566880 chr02:028566880 0 W/28566880-28566880 FN4325-S SNP T -> A AC=1;AN=170;BQB=0.871629;DP=2646;DP4=1404,1111,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39221e-07;MQSB=0.996733;RPB=0.848808;SGB=34.878;VDB=0.712673;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.2:28566881 chr02:028566881 0 W/28566881-28566881 FN4325-S SNP T -> A AC=1;AN=170;BQB=0.97123;DP=2640;DP4=1421,1127,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.19371e-10;MQSB=0.988572;RPB=0.788601;SGB=22.3266;VDB=0.618272;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.2:28566911 chr02:028566911 0 W/28566911-28566911 FN4325-S SNP C -> G AC=1;AN=170;BQB=0.781131;DP=2590;DP4=1424,1087,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.57232e-09;MQSB=0.999564;RPB=0.970518;SGB=38.3207;VDB=0.252077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.2:28579939 chr02:028579939 0 W/28579939-28579939 FN-174 Single Base Substitution G-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3449-S.SNP.2:28580028 chr02:028580028 0 W/28580028-28580028 FN3449-S SNP T -> C AC=1;AN=184;BQB=0.9978;DP=2722;DP4=1207,1410,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57396e-11;MQSB=0.990373;RPB=0.737817;SGB=75.8731;VDB=0.443079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1406-S.SNP.2:28585489 chr02:028585489 0 W/28585489-28585489 FN1406-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g46860 oligopeptide transporter 4, putative, expressed SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3434-S.SNP.2:28592755 chr02:028592755 0 W/28592755-28592755 FN3434-S SNP G -> T AC=1;AN=184;BQB=0.998808;DP=3818;DP4=2017,1691,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.233892;MQB=0.642182;MQSB=0;RPB=0.965316;SGB=81.5311;VDB=0.780184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P47Q|549|LOC_Os02g46870|protein_coding|CODING|LOC_Os02g46870.1|1|1) FN563-S.SNP.2:28599315 chr02:028599315 0 W/28599315-28599315 FN563-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g46880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3386-S.SNP.2:28600920 chr02:028600920 0 W/28600920-28600920 FN3386-S SNP T -> G AC=1;AN=184;BQB=0.989572;DP=3559;DP4=1604,1771,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0455184;MQB=0.176826;MQSB=0.00126912;RPB=0.338645;SGB=39.2697;VDB=0.147066;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Gtt|F1514V|1774|LOC_Os02g46880|protein_coding|CODING|LOC_Os02g46880.1|3|1) FN2218-S.SNP.2:28603349 chr02:028603349 0 W/28603349-28603349 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.483931;DP=3147;DP4=1326,1594,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.180489;MQB=0.56527;MQSB=1.98947e-40;RPB=0.942703;SGB=57.4238;VDB=0.271615;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.2:28611422 chr02:028611422 0 W/28611422-28611422 FN792-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g46900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2535-S.SNP.2:28611472 chr02:028611472 0 W/28611472-28611472 FN2535-S SNP C -> G AC=2;AN=198;BQB=0.830943;DP=3959;DP4=1989,1785,14,19;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0.0181864;MQB=0.150072;MQSB=0.0328274;RPB=0.882167;SGB=70.8662;VDB=0.811229;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K271N|737|LOC_Os02g46900|protein_coding|CODING|LOC_Os02g46900.1|2|1) FN463-S.SNP.2:28612113 chr02:028612113 0 W/28612113-28612113 FN463-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g46900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1650-S.SNP.2:28612817 chr02:028612817 0 W/28612817-28612817 FN1650-S Single Base Substitution A-G INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN967-S.SNP.2:28615401 chr02:028615401 0 W/28615401-28615401 FN967-S Single Base Substitution G-A INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN1548-S.SNP.2:28633238 chr02:028633238 0 W/28633238-28633238 FN1548-S SNP A -> G AC=2;AN=188;BQB=2.41987e-05;DP=3539;DP4=1978,1496,15,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.60246e-08;MQSB=0.466235;RPB=0.35383;SGB=-202.367;VDB=0.202026;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.2:28641083 chr02:028641083 0 W/28641083-28641083 FN358-S Single Base Substitution C-T INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3598-S.SNP.2:28645648 chr02:028645648 0 W/28645648-28645648 FN3598-S SNP A -> G AC=2;AN=188;BQB=0.999566;DP=2801;DP4=1303,1422,13,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.29265e-21;MQSB=0.993082;RPB=0.990316;SGB=148.931;VDB=0.132284;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.2:28648038 chr02:028648038 0 W/28648038-28648038 FN625-S Single Base Substitution A-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN625-S.SNP.2:28648039 chr02:028648039 0 W/28648039-28648039 FN625-S Single Base Substitution C-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1082-S.SNP.2:28650018 chr02:028650018 0 W/28650018-28650018 FN1082-S Single Base Substitution T-C INTERGENIC HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN_830-6-1.SNP.2:28664055 chr02:028664055 0 W/28664055-28664055 FN_830-6-1 Single Base Substitution C-G Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN4087-S.SNP.2:28676300 chr02:028676300 0 W/28676300-28676300 FN4087-S SNP A -> T AC=2;AN=182;BQB=0.48664;DP=2842;DP4=1383,1371,4,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=0.000318352;MQSB=0.873139;RPB=0.947245;SGB=13.1007;VDB=0.78834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y304F|392|LOC_Os02g46962|protein_coding|CODING|LOC_Os02g46962.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y304F|392|LOC_Os02g46962|protein_coding|CODING|LOC_Os02g46962.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y304F|392|LOC_Os02g46962|protein_coding|CODING|LOC_Os02g46962.3|4|1) FN4107-S.SNP.2:28685262 chr02:028685262 0 W/28685262-28685262 FN4107-S SNP A -> C AC=1;AN=182;BQB=0.982808;DP=3075;DP4=1478,1459,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.40101e-05;MQSB=0.98938;RPB=0.736655;SGB=21.5845;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.2:28690409 chr02:028690409 0 W/28690409-28690409 FN521-S Single Base Substitution A-T INTRON HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN4165-S.SNP.2:28694934 chr02:028694934 0 W/28694934-28694934 FN4165-S SNP A -> T AC=2;AN=170;BQB=0.995894;DP=2715;DP4=1351,1279,13,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.02062e-18;MQSB=0.999683;RPB=0.267379;SGB=23.0869;VDB=0.0196802;EFF=UTR_3_PRIME(MODIFIER||36||156|LOC_Os02g47000|protein_coding|CODING|LOC_Os02g47000.1|3|1),UTR_3_PRIME(MODIFIER||467||99|LOC_Os02g47000|protein_coding|CODING|LOC_Os02g47000.2|2|1) FN4165-S.SNP.2:28694939 chr02:028694939 0 W/28694939-28694939 FN4165-S SNP G -> T AC=2;AN=170;BQB=0.896326;DP=2679;DP4=1335,1249,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.35912e-16;MQSB=0.999326;RPB=0.183903;SGB=101.184;VDB=0.00949549;EFF=UTR_3_PRIME(MODIFIER||31||156|LOC_Os02g47000|protein_coding|CODING|LOC_Os02g47000.1|3|1),UTR_3_PRIME(MODIFIER||462||99|LOC_Os02g47000|protein_coding|CODING|LOC_Os02g47000.2|2|1) FN1764-S.SNP.2:28698785 chr02:028698785 0 W/28698785-28698785 FN1764-S SNP T -> A AC=1;AN=188;BQB=0.0042243;DP=3976;DP4=1982,1969,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000132405;MQSB=0.954009;RPB=0.939664;SGB=-56.0757;VDB=0.918524;EFF=INTRON(MODIFIER||||281|LOC_Os02g47010|protein_coding|CODING|LOC_Os02g47010.1|9|1) FN1764-S.SNP.2:28698786 chr02:028698786 0 W/28698786-28698786 FN1764-S SNP G -> A AC=1;AN=188;BQB=0.326439;DP=3976;DP4=1985,1969,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.329e-06;MQSB=0.960564;RPB=0.657419;SGB=0.908326;VDB=0.878362;EFF=INTRON(MODIFIER||||281|LOC_Os02g47010|protein_coding|CODING|LOC_Os02g47010.1|9|1) FN756-S.SNP.2:28700727 chr02:028700727 0 W/28700727-28700727 FN756-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN588-S.SNP.2:28706955 chr02:028706955 0 W/28706955-28706955 FN588-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2380.SNP.2:28718808 chr02:028718808 0 W/28718808-28718808 FN2380 SNP G -> T AC=1;AN=192;BQB=0.803526;DP=5006;DP4=2263,2322,3,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00119856;MQB=5.45866e-08;MQSB=0.449308;RPB=0.689854;SGB=39.78;VDB=0.211389;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.2:28723159 chr02:028723159 0 W/28723159-28723159 FN-123 Single Base Substitution T-A INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN-123.SNP.2:28723160 chr02:028723160 0 W/28723160-28723160 FN-123 Single Base Substitution T-A INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN2485.SNP.2:28727578 chr02:028727578 0 W/28727578-28727578 FN2485 SNP G -> T AC=2;AN=200;BQB=0.779687;DP=4510;DP4=2238,2043,18,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.80738e-21;MQSB=0.743771;RPB=0.986089;SGB=44.8037;VDB=0.841885;EFF=INTRON(MODIFIER||||506|LOC_Os02g47060|protein_coding|CODING|LOC_Os02g47060.1|1|1) FN3345-S.SNP.2:28728446 chr02:028728446 0 W/28728446-28728446 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.562278;DP=2782;DP4=1278,1413,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37699e-07;MQSB=0.99346;RPB=0.228911;SGB=71.3514;VDB=0.354135;EFF=INTRON(MODIFIER||||506|LOC_Os02g47060|protein_coding|CODING|LOC_Os02g47060.1|2|1) FN1458-S.SNP.2:28735908 chr02:028735908 0 W/28735908-28735908 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN939-S.SNP.2:28736446 chr02:028736446 0 W/28736446-28736446 FN939-S Single Base Substitution G-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2271-S.SNP.2:28742544 chr02:028742544 0 W/28742544-28742544 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.143046;DP=4853;DP4=2444,2025,22,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.02301e-17;MQSB=0.894372;RPB=0.533061;SGB=72.1834;VDB=0.726682;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.2:28745720 chr02:028745720 0 W/28745720-28745720 FN753-S Single Base Substitution T-A INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2403.SNP.2:28753567 chr02:028753567 0 W/28753567-28753567 FN2403 SNP C -> G AC=1;AN=200;BQB=0.933904;DP=3839;DP4=1608,1925,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60512e-09;MQSB=0.353847;RPB=1;SGB=54.6902;VDB=0.918085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P64R|185|LOC_Os02g47100|protein_coding|CODING|LOC_Os02g47100.1|1|1) FN4304-S.SNP.2:28763540 chr02:028763540 0 W/28763540-28763540 FN4304-S SNP G -> T AC=2;AN=170;BQB=0.838483;DP=2697;DP4=1441,1196,9,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.85845e-10;MQSB=0.999998;RPB=0.50002;SGB=55.5339;VDB=0.596127;EFF=SPLICE_SITE_REGION(LOW||||868|LOC_Os02g47120|protein_coding|CODING|LOC_Os02g47120.1|7|1),INTRON(MODIFIER||||868|LOC_Os02g47120|protein_coding|CODING|LOC_Os02g47120.1|7|1) FN2649-S.SNP.2:28773698 chr02:028773698 0 W/28773698-28773698 FN2649-S SNP T -> A AC=1;AN=200;BQB=0.944434;DP=5239;DP4=2555,2432,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50228e-10;MQSB=0.996681;RPB=0.907395;SGB=68.0801;VDB=0.967713;EFF=INTRON(MODIFIER||||166|LOC_Os02g47140|protein_coding|CODING|LOC_Os02g47140.2|1|1),INTRON(MODIFIER||||166|LOC_Os02g47140|protein_coding|CODING|LOC_Os02g47140.1|1|1) FN3815-S.SNP.2:28776982 chr02:028776982 0 W/28776982-28776982 FN3815-S SNP C -> T AC=1;AN=190;BQB=0.941037;DP=2683;DP4=1203,1345,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34712e-07;MQSB=0.823938;RPB=0.929649;SGB=44.5415;VDB=0.54266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.2:28796925 chr02:028796925 0 W/28796925-28796925 FN2342 SNP T -> A AC=1;AN=192;BQB=0.277041;DP=5067;DP4=2464,2028,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.21428e-06;MQSB=0.921526;RPB=0.991584;SGB=10.4835;VDB=0.518255;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E607V|827|LOC_Os02g47170|protein_coding|CODING|LOC_Os02g47170.1|4|1) FN4229-S.SNP.2:28803451 chr02:028803451 0 W/28803451-28803451 FN4229-S SNP G -> A AC=1;AN=170;BQB=0.998535;DP=2868;DP4=1427,1362,12,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.67842e-14;MQSB=0.991315;RPB=0.951824;SGB=44.3104;VDB=0.257521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G47R|469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G47R|469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.2|2|1),SPLICE_SITE_REGION(LOW||||469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.1|2|1),SPLICE_SITE_REGION(LOW||||469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.2|2|1) FN2702-S.SNP.2:28803505 chr02:028803505 0 W/28803505-28803505 FN2702-S SNP C -> T AC=2;AN=200;BQB=0.961942;DP=4640;DP4=2392,2014,9,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22964e-09;MQSB=0.940707;RPB=0.116211;SGB=47.4799;VDB=0.220625;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L65|469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L65|469|LOC_Os02g47180|protein_coding|CODING|LOC_Os02g47180.2|2|1) FN1441-S.SNP.2:28807325 chr02:028807325 0 W/28807325-28807325 FN1441-S Single Base Substitution T-A INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1441-S.SNP.2:28807326 chr02:028807326 0 W/28807326-28807326 FN1441-S Single Base Substitution T-A INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN4095-S.SNP.2:28808197 chr02:028808197 0 W/28808197-28808197 FN4095-S SNP C -> T AC=2;AN=182;BQB=0.831771;DP=3864;DP4=1817,1950,17,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.19922e-21;MQSB=0.871014;RPB=0.0264024;SGB=119.888;VDB=0.207523;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.2:28818316 chr02:028818316 0 W/28818316-28818316 FN_N1-151-7 Single Base Substitution G-A Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN820-S.SNP.2:28821273 chr02:028821273 0 W/28821273-28821273 FN820-S Single Base Substitution G-T INTRON HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN1761-S.SNP.2:28825581 chr02:028825581 0 W/28825581-28825581 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.416457;DP=3531;DP4=1698,1792,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.13303e-08;MQSB=0.974563;RPB=0.643824;SGB=-56.0757;VDB=0.442372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R319Q|459|LOC_Os02g47220|protein_coding|CODING|LOC_Os02g47220.1|16|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R319Q|459|LOC_Os02g47220|protein_coding|CODING|LOC_Os02g47220.2|16|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R285Q|425|LOC_Os02g47220|protein_coding|CODING|LOC_Os02g47220.3|11|1) FN-299.SNP.2:28827182 chr02:028827182 0 W/28827182-28827182 FN-299 Single Base Substitution A-T INTRON HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN405-S.SNP.2:28827796 chr02:028827796 0 W/28827796-28827796 FN405-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3717-S.SNP.2:28831183 chr02:028831183 0 W/28831183-28831183 FN3717-S SNP T -> A AC=1;AN=190;BQB=0.57299;DP=2951;DP4=1097,1769,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000161136;MQSB=0.714591;RPB=0.273413;SGB=49.0954;VDB=0.0797555;EFF=INTRON(MODIFIER||||259|LOC_Os02g47230|protein_coding|CODING|LOC_Os02g47230.2|3|1),INTRON(MODIFIER||||411|LOC_Os02g47230|protein_coding|CODING|LOC_Os02g47230.1|2|1) FN-106.SNP.2:28833446 chr02:028833446 0 W/28833446-28833446 FN-106 Single Base Substitution G-A UTR_5_PRIME HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. W500-4-7-1.SNP.2:28833569 chr02:028833569 0 W/28833569-28833569 W500-4-7-1 Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN491-S.SNP.2:28838521 chr02:028838521 0 W/28838521-28838521 FN491-S Single Base Substitution G-A INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN4224-S.SNP.2:28850493 chr02:028850493 0 W/28850493-28850493 FN4224-S SNP T -> A AC=2;AN=170;BQB=0.72781;DP=2550;DP4=1307,1015,11,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.56149e-16;MQSB=0.99999;RPB=0.686441;SGB=27.4149;VDB=0.986764;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.2:28850949 chr02:028850949 0 W/28850949-28850949 FN-290 Single Base Substitution A-G INTERGENIC HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN-128.SNP.2:28851060 chr02:028851060 0 W/28851060-28851060 FN-128 Single Base Substitution T-C INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN-392.SNP.2:28851992 chr02:028851992 0 W/28851992-28851992 FN-392 Single Base Substitution A-G INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN4172-S.SNP.2:28857792 chr02:028857792 0 W/28857792-28857792 FN4172-S SNP G -> A AC=1;AN=170;BQB=0.980751;DP=2381;DP4=1131,1155,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19534e-05;MQSB=0.944101;RPB=0.227066;SGB=47.8722;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.2:28870774 chr02:028870774 0 W/28870774-28870774 FN2655-S SNP T -> G AC=1;AN=200;BQB=0.897651;DP=4433;DP4=2105,2123,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00293255;MQB=1.99379e-10;MQSB=0.275428;RPB=0.273984;SGB=72.6852;VDB=0.0100004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.2:28871502 chr02:028871502 0 W/28871502-28871502 FN2480 SNP T -> A AC=1;AN=200;BQB=0.996364;DP=4881;DP4=2454,2129,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000134569;MQSB=0.980928;RPB=0.969905;SGB=40.4492;VDB=0.989216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.2:28876342 chr02:028876342 0 W/28876342-28876342 FN2711-S SNP G -> A AC=2;AN=200;BQB=0.108947;DP=3193;DP4=1792,1124,12,6;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000313185;MQB=2.45923e-07;MQSB=7.95875e-15;RPB=0.989201;SGB=77.2904;VDB=0.344259;EFF=INTRON(MODIFIER||||83|LOC_Os02g47290|protein_coding|CODING|LOC_Os02g47290.1|1|1) FN2551-S.SNP.2:28886470 chr02:028886470 0 W/28886470-28886470 FN2551-S SNP T -> G AC=1;AN=198;BQB=0.189085;DP=3963;DP4=1948,1778,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01363e-11;MQSB=0.990219;RPB=0.960681;SGB=18.9201;VDB=0.791129;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.2:28892913 chr02:028892913 0 W/28892913-28892913 FN1675-S SNP C -> T AC=2;AN=188;BQB=0.998009;DP=2128;DP4=1596,475,20,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.31588e-14;MQSB=0.823714;RPB=0.911689;SGB=67.8739;VDB=0.209345;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.2:28894951 chr02:028894951 0 W/28894951-28894951 FN4119-S SNP C -> T AC=2;AN=182;BQB=0.982067;DP=3168;DP4=1440,1664,9,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.13465e-12;MQSB=0.986415;RPB=0.957516;SGB=93.7308;VDB=0.691414;EFF=INTRON(MODIFIER||||362|LOC_Os02g47310|protein_coding|CODING|LOC_Os02g47310.1|1|1) FN3695-S.SNP.2:28900680 chr02:028900680 0 W/28900680-28900680 FN3695-S SNP A -> T AC=1;AN=190;BQB=0.691535;DP=2906;DP4=1366,1419,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.6815e-06;MQSB=0.984639;RPB=0.9991;SGB=62.7569;VDB=0.528561;EFF=INTRON(MODIFIER||||194|LOC_Os02g47320|protein_coding|CODING|LOC_Os02g47320.1|1|1) FN2473.SNP.2:28901133 chr02:028901133 0 W/28901133-28901133 FN2473 SNP C -> T AC=2;AN=200;BQB=0.937972;DP=3969;DP4=2023,1709,15,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000251953;MQB=8.69386e-15;MQSB=0.23089;RPB=0.253684;SGB=114.132;VDB=0.0963187;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.2:28902792 chr02:028902792 0 W/28902792-28902792 FN1537-S Single Base Substitution G-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2545-S.SNP.2:28904800 chr02:028904800 0 W/28904800-28904800 FN2545-S SNP G -> A AC=2;AN=198;BQB=0.889611;DP=4109;DP4=1976,1890,15,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000973473;MQB=8.52003e-12;MQSB=0.793714;RPB=0.894217;SGB=57.8907;VDB=0.44026;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1269S|1582|LOC_Os02g47340|protein_coding|CODING|LOC_Os02g47340.1|9|1) FN3496-S.SNP.2:28907047 chr02:028907047 0 W/28907047-28907047 FN3496-S SNP G -> A AC=2;AN=188;BQB=0.31547;DP=2781;DP4=1208,1486,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.47902e-12;MQSB=0.958118;RPB=0.929973;SGB=89.1337;VDB=0.987988;EFF=SPLICE_SITE_REGION(LOW||||1582|LOC_Os02g47340|protein_coding|CODING|LOC_Os02g47340.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G644|1582|LOC_Os02g47340|protein_coding|CODING|LOC_Os02g47340.1|6|1) W472-5-1.SNP.2:28912282 chr02:028912282 0 W/28912282-28912282 W472-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN631-S.SNP.2:28924296 chr02:028924296 0 W/28924296-28924296 FN631-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g47380 retrotransposon protein, putative, unclassified, expressed SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1038-S.SNP.2:28934553 chr02:028934553 0 W/28934553-28934553 FN1038-S Single Base Substitution A-C INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN302-S.SNP.2:28936508 chr02:028936508 0 W/28936508-28936508 FN302-S Single Base Substitution T-C INTRON HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-79.SNP.2:28942565 chr02:028942565 0 W/28942565-28942565 FN-79 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g47410 protein kinase, putative, expressed SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3731-S.SNP.2:28942682 chr02:028942682 0 W/28942682-28942682 FN3731-S SNP A -> G AC=1;AN=190;BQB=0.807799;DP=2833;DP4=1648,1085,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58126e-09;MQSB=0.938455;RPB=0.558491;SGB=21.1058;VDB=0.168527;EFF=SPLICE_SITE_DONOR(HIGH||||946|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.1|14|1),SPLICE_SITE_DONOR(HIGH||||944|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.3|14|1),SPLICE_SITE_REGION(LOW||||945|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.2|14|1),INTRON(MODIFIER||||946|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.1|14|1),INTRON(MODIFIER||||944|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.3|14|1),INTRON(MODIFIER||||945|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.2|14|1);LOF=(LOC_Os02g47410|LOC_Os02g47410|3|0.67) FN4146-S.SNP.2:28945722 chr02:028945722 0 W/28945722-28945722 FN4146-S SNP A -> G AC=1;AN=170;BQB=0.990623;DP=2356;DP4=1134,1166,13,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.71517e-12;MQSB=0.999696;RPB=0.999105;SGB=78.9707;VDB=0.440946;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M210T|946|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M210T|945|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M210T|944|LOC_Os02g47410|protein_coding|CODING|LOC_Os02g47410.3|4|1) FN3481-S.SNP.2:28951674 chr02:028951674 0 W/28951674-28951674 FN3481-S SNP C -> T AC=1;AN=184;BQB=0.724194;DP=3710;DP4=1633,1967,8,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.93855e-14;MQSB=0.806349;RPB=0.996961;SGB=112.047;VDB=0.865027;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.2:28952505 chr02:028952505 0 W/28952505-28952505 FN3115-S SNP G -> A AC=1;AN=184;BQB=0.99965;DP=2559;DP4=1351,1080,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09134e-12;MQSB=0.853197;RPB=0.823009;SGB=43.4494;VDB=0.080595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.2:28954704 chr02:028954704 0 W/28954704-28954704 FN1264-S Single Base Substitution G-A INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN472-S.SNP.2:28966474 chr02:028966474 0 W/28966474-28966474 FN472-S Single Base Substitution T-A INTERGENIC HOMO SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3701-S.SNP.2:28968663 chr02:028968663 0 W/28968663-28968663 FN3701-S SNP G -> A AC=2;AN=190;BQB=0.979075;DP=2925;DP4=1512,1305,20,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45131e-21;MQSB=0.977711;RPB=0.741157;SGB=144.727;VDB=0.803015;EFF=INTRON(MODIFIER||||267|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.1|4|1),INTRON(MODIFIER||||157|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.2|4|1),INTRON(MODIFIER||||172|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.3|4|1) FN3701-S.SNP.2:28968666 chr02:028968666 0 W/28968666-28968666 FN3701-S SNP G -> A AC=2;AN=190;BQB=0.581122;DP=2918;DP4=1489,1310,21,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.53125e-21;MQSB=0.971889;RPB=0.823389;SGB=149.281;VDB=0.834022;EFF=INTRON(MODIFIER||||267|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.1|4|1),INTRON(MODIFIER||||157|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.2|4|1),INTRON(MODIFIER||||172|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.3|4|1) FN1686-S.SNP.2:28969382 chr02:028969382 0 W/28969382-28969382 FN1686-S SNP C -> A AC=2;AN=188;BQB=0.101555;DP=3937;DP4=1937,1928,30,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.70426e-20;MQSB=0.87677;RPB=0.64676;SGB=-598.648;VDB=0.0236595;EFF=INTRON(MODIFIER||||267|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.1|3|1),INTRON(MODIFIER||||157|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.2|3|1),INTRON(MODIFIER||||172|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.3|3|1) FN3380-S.SNP.2:28972665 chr02:028972665 0 W/28972665-28972665 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.754445;DP=3026;DP4=1437,1479,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.93348e-08;MQSB=0.805303;RPB=0.983478;SGB=28.3187;VDB=0.921533;EFF=INTRON(MODIFIER||||172|LOC_Os02g47440|protein_coding|CODING|LOC_Os02g47440.3|1|1) FN2545-S.SNP.2:28983475 chr02:028983475 0 W/28983475-28983475 FN2545-S SNP T -> C AC=1;AN=198;BQB=0.296716;DP=4115;DP4=1873,1939,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243013;MQB=2.22855e-08;MQSB=0.328574;RPB=0.989128;SGB=40.149;VDB=0.874637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.2:28988826 chr02:028988826 0 W/28988826-28988826 FN1220-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN990-S.SNP.2:28991475 chr02:028991475 0 W/28991475-28991475 FN990-S Single Base Substitution T-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN794-S.SNP.2:28993003 chr02:028993003 0 W/28993003-28993003 FN794-S Single Base Substitution C-A INTERGENIC HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN504-S.SNP.2:29006316 chr02:029006316 0 W/29006316-29006316 FN504-S Single Base Substitution A-T INTRON HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-344.SNP.2:29012840 chr02:029012840 0 W/29012840-29012840 FN-344 Single Base Substitution C-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-145.SNP.2:29018066 chr02:029018066 0 W/29018066-29018066 FN-145 Single Base Substitution A-T INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1115-S.SNP.2:29018066 chr02:029018066 0 W/29018066-29018066 FN1115-S Single Base Substitution A-T INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN685-S.SNP.2:29018066 chr02:029018066 0 W/29018066-29018066 FN685-S Single Base Substitution A-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN414-S.SNP.2:29020687 chr02:029020687 0 W/29020687-29020687 FN414-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN3810-S.SNP.2:29029437 chr02:029029437 0 W/29029437-29029437 FN3810-S SNP G -> C AC=1;AN=190;BQB=0.934696;DP=3095;DP4=1703,1299,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72619e-05;MQSB=0.996395;RPB=0.996751;SGB=39.9877;VDB=0.788315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.2:29034587 chr02:029034587 0 W/29034587-29034587 FN3650-S SNP T -> A AC=1;AN=190;BQB=0.821811;DP=2843;DP4=1250,1421,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.33785e-08;MQSB=0.989995;RPB=0.674289;SGB=39.6545;VDB=0.951383;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.2:29061892 chr02:029061892 0 W/29061892-29061892 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.193473;DP=3617;DP4=1594,1989,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27351e-05;MQSB=0.979357;RPB=0.980899;SGB=-16.665;VDB=0.751972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G166D|417|LOC_Os02g47560|protein_coding|CODING|LOC_Os02g47560.1|1|1) FN3360-S.SNP.2:29068507 chr02:029068507 0 W/29068507-29068507 FN3360-S SNP T -> C AC=1;AN=184;BQB=0.995223;DP=3001;DP4=1437,1468,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35672e-15;MQSB=0.988586;RPB=0.954381;SGB=116.569;VDB=0.578665;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.2:29069474 chr02:029069474 0 W/29069474-29069474 FN-269 Single Base Substitution C-T UTR_5_PRIME HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3862-S.SNP.2:29072276 chr02:029072276 0 W/29072276-29072276 FN3862-S SNP T -> G AC=1;AN=158;BQB=0.996417;DP=2356;DP4=1160,1084,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000424448;MQB=3.28431e-05;MQSB=0.980174;RPB=0.828783;SGB=38.3284;VDB=0.727693;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.2:29079292 chr02:029079292 0 W/29079292-29079292 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.992865;DP=2426;DP4=1252,1096,15,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.73448e-15;MQSB=0.931608;RPB=0.966067;SGB=69.3045;VDB=0.664559;EFF=INTRON(MODIFIER||||367|LOC_Os02g47590|protein_coding|CODING|LOC_Os02g47590.1|1|1) FN3417-S.SNP.2:29081136 chr02:029081136 0 W/29081136-29081136 FN3417-S SNP G -> C AC=1;AN=184;BQB=0.960363;DP=2589;DP4=1214,1290,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.6767e-08;MQSB=0.987206;RPB=0.551113;SGB=48.7425;VDB=0.66732;EFF=UTR_3_PRIME(MODIFIER||152||367|LOC_Os02g47590|protein_coding|CODING|LOC_Os02g47590.1|5|1) FN1540-S.SNP.2:29084621 chr02:029084621 0 W/29084621-29084621 FN1540-S Single Base Substitution T-C INTRON Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2231-S.SNP.2:29096378 chr02:029096378 0 W/29096378-29096378 FN2231-S SNP C -> T AC=2;AN=190;BQB=0.825428;DP=4944;DP4=2216,2331,25,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.76255e-27;MQSB=0.947365;RPB=0.946436;SGB=58.4968;VDB=0.606366;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E141|306|LOC_Os02g47610|protein_coding|CODING|LOC_Os02g47610.1|3|1) FN4156-S.SNP.2:29098060 chr02:029098060 0 W/29098060-29098060 FN4156-S SNP G -> A AC=1;AN=170;BQB=0.963371;DP=2513;DP4=1156,1224,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.10341e-11;MQSB=0.999961;RPB=0.932394;SGB=52.0913;VDB=0.12715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.2:29099861 chr02:029099861 0 W/29099861-29099861 FN2595-S SNP A -> C AC=1;AN=198;BQB=0.764883;DP=3889;DP4=2111,1505,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.64137e-11;MQSB=0.932135;RPB=0.826096;SGB=29.3443;VDB=0.651075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F235V|427|LOC_Os02g47620|protein_coding|CODING|LOC_Os02g47620.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F267V|410|LOC_Os02g47620|protein_coding|CODING|LOC_Os02g47620.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F235V|378|LOC_Os02g47620|protein_coding|CODING|LOC_Os02g47620.3|4|1) FN508-S.SNP.2:29100753 chr02:029100753 0 W/29100753-29100753 FN508-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN1314-S.SNP.2:29103177 chr02:029103177 0 W/29103177-29103177 FN1314-S Single Base Substitution A-G INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN464-S.SNP.2:29108542 chr02:029108542 0 W/29108542-29108542 FN464-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN465-S.SNP.2:29118139 chr02:029118139 0 W/29118139-29118139 FN465-S Single Base Substitution A-G INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2285.SNP.2:29125688 chr02:029125688 0 W/29125688-29125688 FN2285 SNP T -> C AC=1;AN=192;BQB=0.987282;DP=5357;DP4=2614,2483,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.3457e-11;MQSB=0.885594;RPB=0.993973;SGB=61.1661;VDB=0.103823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.2:29130293 chr02:029130293 0 W/29130293-29130293 FN2724-S SNP C -> A AC=2;AN=200;BQB=0.984592;DP=4380;DP4=2453,1669,28,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=8.69142e-16;MQSB=0.0573871;RPB=0.859406;SGB=52.8295;VDB=0.132419;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.2:29134244 chr02:029134244 0 W/29134244-29134244 FN1538-S Single Base Substitution A-G INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3518-S.SNP.2:29136139 chr02:029136139 0 W/29136139-29136139 FN3518-S SNP T -> C AC=2;AN=188;BQB=0.940418;DP=2672;DP4=1289,1317,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6481e-14;MQSB=0.964466;RPB=0.273267;SGB=108.042;VDB=0.273233;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V685|770|LOC_Os02g47670|protein_coding|CODING|LOC_Os02g47670.2|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V685|770|LOC_Os02g47670|protein_coding|CODING|LOC_Os02g47670.1|6|1) FN3965-S.SNP.2:29136404 chr02:029136404 0 W/29136404-29136404 FN3965-S SNP T -> G AC=2;AN=168;BQB=0.988218;DP=2607;DP4=1205,1266,30,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.43579e-24;MQSB=0.968651;RPB=0.999395;SGB=176.699;VDB=0.00780764;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y597S|770|LOC_Os02g47670|protein_coding|CODING|LOC_Os02g47670.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y597S|770|LOC_Os02g47670|protein_coding|CODING|LOC_Os02g47670.1|6|1) FN782-S.SNP.2:29145294 chr02:029145294 0 W/29145294-29145294 FN782-S Single Base Substitution G-C INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. W591-4-1.SNP.2:29146990 chr02:029146990 0 W/29146990-29146990 W591-4-1 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1634-S.SNP.2:29161015 chr02:029161015 0 W/29161015-29161015 FN1634-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g47690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3740-S.SNP.2:29161873 chr02:029161873 0 W/29161873-29161873 FN3740-S SNP A -> G AC=1;AN=190;BQB=0.331301;DP=2844;DP4=1123,1608,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0562588;MQB=0.235767;MQSB=0.415403;RPB=0.929277;SGB=36.1006;VDB=0.703805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.2:29169167 chr02:029169167 0 W/29169167-29169167 FN1104-S Single Base Substitution A-G INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2165-S.SNP.2:29170693 chr02:029170693 0 W/29170693-29170693 FN2165-S SNP C -> T AC=2;AN=168;BQB=0.843282;DP=2926;DP4=1443,1414,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.16485e-14;MQSB=0.860818;RPB=0.99988;SGB=-11.0644;VDB=0.889483;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.2:29176649 chr02:029176649 0 W/29176649-29176649 FN864-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g47730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2546-S.SNP.2:29178083 chr02:029178083 0 W/29178083-29178083 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.818595;DP=4802;DP4=2365,2206,12,2;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0266556;MQB=0.21427;MQSB=0.86031;RPB=0.257223;SGB=21.559;VDB=0.170402;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y901|2093|LOC_Os02g47730|protein_coding|CODING|LOC_Os02g47730.1|7|1) FN3369-S.SNP.2:29179436 chr02:029179436 0 W/29179436-29179436 FN3369-S SNP G -> A AC=2;AN=184;BQB=0.409717;DP=2926;DP4=1388,1411,21,19;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0177717;MQB=1.59519e-08;MQSB=0.0712;RPB=0.901795;SGB=175.352;VDB=0.566769;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H518|2093|LOC_Os02g47730|protein_coding|CODING|LOC_Os02g47730.1|5|1) FN2397.SNP.2:29179782 chr02:029179782 0 W/29179782-29179782 FN2397 SNP C -> T AC=1;AN=200;BQB=0.825095;DP=5120;DP4=2562,2252,11,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00429688;MQB=6.28275e-06;MQSB=7.68037e-14;RPB=0.997369;SGB=72.7161;VDB=0.21694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R403Q|2093|LOC_Os02g47730|protein_coding|CODING|LOC_Os02g47730.1|5|1) FN2664-S.SNP.2:29182101 chr02:029182101 0 W/29182101-29182101 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.478227;DP=4620;DP4=2225,1935,19,18;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0201299;MQB=2.26516e-09;MQSB=0.00125615;RPB=0.912672;SGB=123.188;VDB=0.629656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.2:29200324 chr02:029200324 0 W/29200324-29200324 FN2619-S SNP G -> C AC=1;AN=198;BQB=0.998751;DP=4103;DP4=2082,1783,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.24794e-06;MQSB=0.975569;RPB=0.996395;SGB=-15.026;VDB=0.676733;EFF=INTRON(MODIFIER||||519|LOC_Os02g47760|protein_coding|CODING|LOC_Os02g47760.1|2|1) FN2724-S.SNP.2:29201436 chr02:029201436 0 W/29201436-29201436 FN2724-S SNP T -> A AC=2;AN=200;BQB=0.857195;DP=5098;DP4=2401,2465,12,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.60801e-19;MQSB=0.944034;RPB=0.283322;SGB=-5.24302;VDB=0.149208;EFF=INTRON(MODIFIER||||519|LOC_Os02g47760|protein_coding|CODING|LOC_Os02g47760.1|3|1) FN2724-S.SNP.2:29201437 chr02:029201437 0 W/29201437-29201437 FN2724-S SNP G -> A AC=2;AN=200;BQB=0.708866;DP=5103;DP4=2354,2495,12,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.37681e-20;MQSB=0.89806;RPB=0.220266;SGB=-41.6328;VDB=0.18722;EFF=INTRON(MODIFIER||||519|LOC_Os02g47760|protein_coding|CODING|LOC_Os02g47760.1|3|1) FN1133-S.SNP.2:29210171 chr02:029210171 0 W/29210171-29210171 FN1133-S Single Base Substitution A-G INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2438.SNP.2:29211592 chr02:029211592 0 W/29211592-29211592 FN2438 SNP G -> T AC=1;AN=200;BQB=0.994118;DP=4789;DP4=2326,2128,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55857e-15;MQSB=0.998007;RPB=0.992597;SGB=87.1368;VDB=0.562211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.2:29212364 chr02:029212364 0 W/29212364-29212364 FN3473-S SNP G -> A AC=1;AN=184;BQB=0.910935;DP=2871;DP4=1646,1114,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=2.53126e-06;MQSB=0.302523;RPB=0.613227;SGB=33.3622;VDB=0.667443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.2:29220120 chr02:029220120 0 W/29220120-29220120 FN2537-S SNP T -> C AC=1;AN=198;BQB=0.87482;DP=4269;DP4=1867,2191,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10406e-08;MQSB=0.988797;RPB=0.465762;SGB=72.5245;VDB=0.302008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.2:29225842 chr02:029225842 0 W/29225842-29225842 FN4152-S SNP C -> T AC=2;AN=170;BQB=0.94512;DP=3069;DP4=1639,1308,21,25;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.61188e-25;MQSB=0.498337;RPB=0.730445;SGB=198.922;VDB=0.212592;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A133|339|LOC_Os02g47780|protein_coding|CODING|LOC_Os02g47780.1|1|1) FN1497-S.SNP.2:29232510 chr02:029232510 0 W/29232510-29232510 FN1497-S Single Base Substitution A-T INTRON HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2357.SNP.2:29234615 chr02:029234615 0 W/29234615-29234615 FN2357 SNP T -> G AC=1;AN=192;BQB=0.921155;DP=5000;DP4=2537,2119,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.82385e-16;MQSB=0.922335;RPB=0.594408;SGB=86.1165;VDB=0.0425718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.2:29234616 chr02:029234616 0 W/29234616-29234616 FN2357 SNP A -> G AC=1;AN=192;BQB=0.979457;DP=4986;DP4=2525,2068,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.54566e-15;MQSB=0.879987;RPB=0.327599;SGB=86.1165;VDB=0.0779552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-62.SNP.2:29236557 chr02:029236557 0 W/29236557-29236557 FN-62 Single Base Substitution C-G INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2299.SNP.2:29243018 chr02:029243018 0 W/29243018-29243018 FN2299 SNP C -> T AC=1;AN=192;BQB=0.647708;DP=5380;DP4=2810,2272,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39135e-05;MQSB=0.969341;RPB=0.45931;SGB=16.0922;VDB=0.47502;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.2:29247359 chr02:029247359 0 W/29247359-29247359 FN389-S Single Base Substitution T-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN4107-S.SNP.2:29270805 chr02:029270805 0 W/29270805-29270805 FN4107-S SNP T -> C AC=1;AN=182;BQB=0.935927;DP=2893;DP4=1476,1365,2,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00020946;MQSB=0.937486;RPB=0.643252;SGB=18.0739;VDB=0.535655;EFF=INTRON(MODIFIER||||473|LOC_Os02g47850|protein_coding|CODING|LOC_Os02g47850.1|2|1),INTRON(MODIFIER||||446|LOC_Os02g47850|protein_coding|CODING|LOC_Os02g47850.2|2|1),INTRON(MODIFIER||||410|LOC_Os02g47850|protein_coding|CODING|LOC_Os02g47850.3|2|1) FN3501-S.SNP.2:29279455 chr02:029279455 0 W/29279455-29279455 FN3501-S SNP C -> T AC=1;AN=188;BQB=0.981078;DP=2616;DP4=1100,1447,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.02698e-06;MQSB=0.709623;RPB=0.940593;SGB=35.3493;VDB=0.0258173;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R147W|652|LOC_Os02g47860|protein_coding|CODING|LOC_Os02g47860.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R147W|652|LOC_Os02g47860|protein_coding|CODING|LOC_Os02g47860.2|3|1) FN1133-S.SNP.2:29282676 chr02:029282676 0 W/29282676-29282676 FN1133-S Single Base Substitution C-T INTRON HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN4146-S.SNP.2:29285791 chr02:029285791 0 W/29285791-29285791 FN4146-S SNP T -> A AC=1;AN=170;BQB=0.988433;DP=2730;DP4=1197,1424,4,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.16588e-11;MQSB=0.876703;RPB=0.687927;SGB=55.5339;VDB=0.185276;EFF=INTRON(MODIFIER||||114|LOC_Os02g47870|protein_coding|CODING|LOC_Os02g47870.1|3|1) FN797-S.SNP.2:29287453 chr02:029287453 0 W/29287453-29287453 FN797-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN797-S.SNP.2:29287477 chr02:029287477 0 W/29287477-29287477 FN797-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2594-S.SNP.2:29292022 chr02:029292022 0 W/29292022-29292022 FN2594-S SNP T -> A AC=1;AN=198;BQB=0.294402;DP=4237;DP4=2142,1869,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.46124e-11;MQSB=0.657656;RPB=0.599494;SGB=79.6954;VDB=0.596005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.2:29292674 chr02:029292674 0 W/29292674-29292674 FN1056-S Single Base Substitution A-T INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3653-S.SNP.2:29296751 chr02:029296751 0 W/29296751-29296751 FN3653-S SNP T -> A AC=1;AN=190;BQB=0.994742;DP=2894;DP4=1308,1423,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28811e-05;MQSB=0.99967;RPB=0.658617;SGB=25.439;VDB=0.536205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N253K|436|LOC_Os02g47890|protein_coding|CODING|LOC_Os02g47890.1|2|1) FN3663-S.SNP.2:29298969 chr02:029298969 0 W/29298969-29298969 FN3663-S SNP A -> G AC=1;AN=190;BQB=0.474794;DP=2855;DP4=1512,1270,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.60925e-07;MQSB=0.999925;RPB=0.932689;SGB=49.0954;VDB=0.931478;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G286|436|LOC_Os02g47890|protein_coding|CODING|LOC_Os02g47890.1|3|1) FN870-S.SNP.2:29322607 chr02:029322607 0 W/29322607-29322607 FN870-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN574-S.SNP.2:29324400 chr02:029324400 0 W/29324400-29324400 FN574-S Single Base Substitution G-A INTERGENIC HOMO SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN3927-S.SNP.2:29331848 chr02:029331848 0 W/29331848-29331848 FN3927-S SNP A -> G AC=1;AN=158;BQB=0.804932;DP=2425;DP4=1184,1137,19,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.03633e-11;MQSB=0.719675;RPB=0.260014;SGB=99.5005;VDB=0.466939;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.2:29332827 chr02:029332827 0 W/29332827-29332827 FN3715-S SNP T -> A AC=1;AN=190;BQB=0.919974;DP=3412;DP4=1641,1674,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000586166;MQB=1.32149e-12;MQSB=0.476796;RPB=0.812777;SGB=103.742;VDB=0.137467;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.2:29333293 chr02:029333293 0 W/29333293-29333293 FN3848-S SNP A -> G AC=1;AN=158;BQB=0.956546;DP=2655;DP4=1261,1306,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0079096;MQB=0.0101158;MQSB=0.000461486;RPB=0.819002;SGB=38.3284;VDB=0.150505;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.2:29333375 chr02:029333375 0 W/29333375-29333375 FN915-S Single Base Substitution A-G INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN4305-S.SNP.2:29333653 chr02:029333653 0 W/29333653-29333653 FN4305-S SNP G -> A AC=2;AN=170;BQB=0.999986;DP=2462;DP4=1160,1164,10,19;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.0101543;MQB=2.39837e-12;MQSB=0.0527874;RPB=0.510492;SGB=56.5237;VDB=0.306496;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.2:29337262 chr02:029337262 0 W/29337262-29337262 FN-128 Single Base Substitution G-A INTRON HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN1528-S.SNP.2:29339017 chr02:029339017 0 W/29339017-29339017 FN1528-S Single Base Substitution T-C INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1553-S.SNP.2:29342737 chr02:029342737 0 W/29342737-29342737 FN1553-S Single Base Substitution A-C INTRON HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN-268.SNP.2:29347351 chr02:029347351 0 W/29347351-29347351 FN-268 Single Base Substitution T-C INTRON HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2118-S.SNP.2:29347470 chr02:029347470 0 W/29347470-29347470 FN2118-S SNP C -> T AC=2;AN=168;BQB=0.380117;DP=3572;DP4=1427,2074,19,40;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.58678e-28;MQSB=0.983138;RPB=0.990443;SGB=-187.984;VDB=0.0374308;EFF=INTRON(MODIFIER||||2162|LOC_Os02g47970|protein_coding|CODING|LOC_Os02g47970.1|10|1) FN1129-S.SNP.2:29362400 chr02:029362400 0 W/29362400-29362400 FN1129-S Single Base Substitution G-A INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN-284.SNP.2:29368572 chr02:029368572 0 W/29368572-29368572 FN-284 Single Base Substitution G-C INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN1299-S.SNP.2:29368572 chr02:029368572 0 W/29368572-29368572 FN1299-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2758-S.SNP.2:29368572 chr02:029368572 0 W/29368572-29368572 FN2758-S SNP G -> C AC=2;AN=200;BQB=0.989219;DP=4665;DP4=2612,1830,17,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.80313e-18;MQSB=0.998259;RPB=0.859029;SGB=101.557;VDB=0.221038;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.2:29368572 chr02:029368572 0 W/29368572-29368572 FN426-S Single Base Substitution G-C INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN476-S.SNP.2:29368572 chr02:029368572 0 W/29368572-29368572 FN476-S Single Base Substitution G-C INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-411.SNP.2:29369078 chr02:029369078 0 W/29369078-29369078 FN-411 Single Base Substitution T-C INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2088-S.SNP.2:29379619 chr02:029379619 0 W/29379619-29379619 FN2088-S SNP A -> G AC=2;AN=168;BQB=0.992757;DP=3958;DP4=1902,1995,19,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.16179e-21;MQSB=0.997799;RPB=0.789863;SGB=42.8227;VDB=0.747194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I125T|679|LOC_Os02g48000|protein_coding|CODING|LOC_Os02g48000.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I81T|635|LOC_Os02g48000|protein_coding|CODING|LOC_Os02g48000.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I125T|629|LOC_Os02g48000|protein_coding|CODING|LOC_Os02g48000.3|4|1) FN-249.SNP.2:29384984 chr02:029384984 0 W/29384984-29384984 FN-249 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g48010 nuclear matrix constituent protein 1-like, putative, expressed SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1600-S.SNP.2:29392176 chr02:029392176 0 W/29392176-29392176 FN1600-S Single Base Substitution T-C INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3825-S.SNP.2:29397670 chr02:029397670 0 W/29397670-29397670 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.817544;DP=2639;DP4=1170,1319,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13531e-05;MQSB=0.967537;RPB=0.301942;SGB=49.0954;VDB=0.906325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.2:29401125 chr02:029401125 0 W/29401125-29401125 FN1656-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g48030 expressed protein SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN3533-S.SNP.2:29401125 chr02:029401125 0 W/29401125-29401125 FN3533-S SNP G -> C AC=2;AN=188;BQB=0.996989;DP=2708;DP4=1528,1069,21,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.19356e-14;MQSB=0.816074;RPB=0.670342;SGB=71.4172;VDB=0.446993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I83M|118|LOC_Os02g48030|protein_coding|CODING|LOC_Os02g48030.1|1|1) FN3721-S.SNP.2:29401125 chr02:029401125 0 W/29401125-29401125 FN3721-S SNP G -> C AC=2;AN=190;BQB=0.773158;DP=2582;DP4=1311,1119,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.58391e-21;MQSB=0.992794;RPB=0.0561009;SGB=158.388;VDB=0.0396596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I83M|118|LOC_Os02g48030|protein_coding|CODING|LOC_Os02g48030.1|1|1) FN849-S.SNP.2:29401877 chr02:029401877 0 W/29401877-29401877 FN849-S Single Base Substitution G-C INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2134-S.SNP.2:29404864 chr02:029404864 0 W/29404864-29404864 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.799132;DP=3919;DP4=1912,1948,24,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48499e-23;MQSB=0.908803;RPB=0.733143;SGB=42.8227;VDB=0.146514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.2:29411430 chr02:029411430 0 W/29411430-29411430 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.816911;DP=3048;DP4=1559,1331,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.86659e-08;MQSB=0.520351;RPB=0.993234;SGB=46.3132;VDB=0.728077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:29434708 chr02:029434708 0 W/29434708-29434708 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.997547;DP=4763;DP4=2317,2163,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68734e-11;MQSB=0.995726;RPB=0.545783;SGB=58.2954;VDB=0.0700703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.2:29436717 chr02:029436717 0 W/29436717-29436717 FN3568-S SNP C -> A AC=1;AN=188;BQB=0.928676;DP=2842;DP4=1298,1442,4,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000351865;MQB=1.63741e-11;MQSB=0.979985;RPB=0.866161;SGB=36.2493;VDB=0.338941;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.2:29436800 chr02:029436800 0 W/29436800-29436800 FN4314-S SNP G -> A AC=1;AN=170;BQB=0.997262;DP=2662;DP4=1296,1251,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.41272e-11;MQSB=0.887897;RPB=0.917514;SGB=58.9766;VDB=0.718077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.2:29444521 chr02:029444521 0 W/29444521-29444521 FN1484-S Single Base Substitution T-G INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1203-S.SNP.2:29447619 chr02:029447619 0 W/29447619-29447619 FN1203-S Single Base Substitution C-T INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-124.SNP.2:29448641 chr02:029448641 0 W/29448641-29448641 FN-124 Single Base Substitution T-C INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN3698-S.SNP.2:29455905 chr02:029455905 0 W/29455905-29455905 FN3698-S SNP A -> T AC=1;AN=190;BQB=0.650526;DP=2729;DP4=1312,1334,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.00092e-05;MQSB=0.999117;RPB=0.095031;SGB=21.8853;VDB=0.215477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E668V|902|LOC_Os02g48110|protein_coding|CODING|LOC_Os02g48110.1|7|1) FN1276-S.SNP.2:29456864 chr02:029456864 0 W/29456864-29456864 FN1276-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g48110 DnaK family protein, putative, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2572-S.SNP.2:29461066 chr02:029461066 0 W/29461066-29461066 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.999911;DP=3816;DP4=1421,2213,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.98484e-09;MQSB=0.580971;RPB=0.648428;SGB=58.1246;VDB=0.428304;EFF=UTR_5_PRIME(MODIFIER||889||357|LOC_Os02g48116|protein_coding|CODING|LOC_Os02g48116.1|1|1) FN-121.SNP.2:29473295 chr02:029473295 0 W/29473295-29473295 FN-121 Single Base Substitution C-T INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN797-S.SNP.2:29484865 chr02:029484865 0 W/29484865-29484865 FN797-S Single Base Substitution A-C INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3967-S.SNP.2:29485387 chr02:029485387 0 W/29485387-29485387 FN3967-S SNP C -> T AC=1;AN=182;BQB=0.952404;DP=3147;DP4=1492,1551,16,20;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.27694e-22;MQSB=0.9961;RPB=0.831574;SGB=116.377;VDB=0.626928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.2:29486601 chr02:029486601 0 W/29486601-29486601 FN1540-S Single Base Substitution G-T INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN-70.SNP.2:29495590 chr02:029495590 0 W/29495590-29495590 FN-70 Single Base Substitution G-C INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN769-S.SNP.2:29497971 chr02:029497971 0 W/29497971-29497971 FN769-S Single Base Substitution G-A INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN871-S.SNP.2:29499273 chr02:029499273 0 W/29499273-29499273 FN871-S Single Base Substitution G-A INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4224-S.SNP.2:29501947 chr02:029501947 0 W/29501947-29501947 FN4224-S SNP A -> G AC=2;AN=170;BQB=0.941116;DP=2152;DP4=955,966,10,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.78234e-17;MQSB=0.890982;RPB=0.872287;SGB=54.081;VDB=0.822985;EFF=UTR_3_PRIME(MODIFIER||41||58|LOC_Os02g48184|protein_coding|CODING|LOC_Os02g48184.1|1|1) FN399-S.SNP.2:29506786 chr02:029506786 0 W/29506786-29506786 FN399-S Single Base Substitution G-A INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2634-S.SNP.2:29507836 chr02:029507836 0 W/29507836-29507836 FN2634-S SNP C -> T AC=1;AN=200;BQB=0.782168;DP=4763;DP4=2028,2398,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.31565e-16;MQSB=0.979327;RPB=0.986902;SGB=87.1368;VDB=0.772449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.2:29515374 chr02:029515374 0 W/29515374-29515374 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.681567;DP=4349;DP4=1896,2218,12,16;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.85834e-08;MQSB=0.000475561;RPB=0.983024;SGB=90.4807;VDB=0.653642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.2:29517288 chr02:029517288 0 W/29517288-29517288 FN1631-S Single Base Substitution C-A INTRON Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1723-S.SNP.2:29528612 chr02:029528612 0 W/29528612-29528612 FN1723-S SNP C -> T AC=2;AN=188;BQB=0.740209;DP=1527;DP4=421,1079,1,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.22909e-06;MQSB=0.666276;RPB=0.215044;SGB=10.8165;VDB=0.470677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.2:29536200 chr02:029536200 0 W/29536200-29536200 FN1163-S Single Base Substitution A-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3927-S.SNP.2:29539294 chr02:029539294 0 W/29539294-29539294 FN3927-S SNP G -> A AC=1;AN=158;BQB=0.993279;DP=2698;DP4=1308,1316,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00185322;MQB=1.68909e-06;MQSB=0.24963;RPB=0.941541;SGB=82.0227;VDB=0.167009;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T932|1073|LOC_Os02g48250|protein_coding|CODING|LOC_Os02g48250.1|2|1) FN-390.SNP.2:29543925 chr02:029543925 0 W/29543925-29543925 FN-390 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g48260 retrotransposon protein, putative, unclassified, expressed SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1563-S.SNP.2:29551509 chr02:029551509 0 W/29551509-29551509 FN1563-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os02g48290 thioredoxin reductase 2, putative, expressed SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1563-S.SNP.2:29551510 chr02:029551510 0 W/29551510-29551510 FN1563-S Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3677-S.SNP.2:29555131 chr02:029555131 0 W/29555131-29555131 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.82793;DP=2715;DP4=1401,1214,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40789e-05;MQSB=0.882164;RPB=0.961097;SGB=49.0954;VDB=0.668543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.2:29558680 chr02:029558680 0 W/29558680-29558680 FN1708-S SNP A -> G AC=2;AN=188;BQB=0.285993;DP=2919;DP4=1554,1305,19,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.19998e-13;MQSB=0.987621;RPB=0.825079;SGB=71.8555;VDB=0.309724;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.2:29560268 chr02:029560268 0 W/29560268-29560268 FN_814-7-1 Single Base Substitution T-C HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1276-S.SNP.2:29560367 chr02:029560367 0 W/29560367-29560367 FN1276-S Single Base Substitution G-A INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2435.SNP.2:29574451 chr02:029574451 0 W/29574451-29574451 FN2435 SNP G -> A AC=1;AN=200;BQB=0.903258;DP=3577;DP4=1895,1424,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000279564;MQB=1.10041e-10;MQSB=0.763413;RPB=0.56881;SGB=86.5007;VDB=0.507447;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.2:29574875 chr02:029574875 0 W/29574875-29574875 FN1247-S Single Base Substitution T-G INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN523-S.SNP.2:29576715 chr02:029576715 0 W/29576715-29576715 FN523-S Single Base Substitution A-G INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.2:29576715 chr02:029576715 0 W/29576715-29576715 FN532-S Single Base Substitution A-G INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2421.SNP.2:29577262 chr02:029577262 0 W/29577262-29577262 FN2421 SNP T -> G AC=1;AN=200;BQB=0.948025;DP=5253;DP4=2799,2128,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.7509e-08;MQSB=0.959662;RPB=0.586;SGB=26.8797;VDB=0.398125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.2:29584376 chr02:029584376 0 W/29584376-29584376 FN1615-S Single Base Substitution C-T INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3552-S.SNP.2:29589289 chr02:029589289 0 W/29589289-29589289 FN3552-S SNP G -> A AC=1;AN=188;BQB=0.991188;DP=3008;DP4=1677,1253,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.22281e-07;MQSB=0.794421;RPB=0.909272;SGB=44.4357;VDB=0.239887;EFF=INTRON(MODIFIER||||308|LOC_Os02g48330|protein_coding|CODING|LOC_Os02g48330.1|2|1) FN3359-S.SNP.2:29598558 chr02:029598558 0 W/29598558-29598558 FN3359-S SNP G -> A AC=1;AN=184;BQB=0.980895;DP=2608;DP4=1248,1272,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.73011e-10;MQSB=0.954466;RPB=0.855086;SGB=8.32411;VDB=0.80973;EFF=UTR_3_PRIME(MODIFIER||1618||296|LOC_Os02g48340|protein_coding|CODING|LOC_Os02g48340.1|8|1),UTR_3_PRIME(MODIFIER||1618||288|LOC_Os02g48340|protein_coding|CODING|LOC_Os02g48340.2|8|1),UTR_3_PRIME(MODIFIER||1618||287|LOC_Os02g48340|protein_coding|CODING|LOC_Os02g48340.3|8|1),UTR_3_PRIME(MODIFIER||2246||181|LOC_Os02g48340|protein_coding|CODING|LOC_Os02g48340.6|7|1) FN3821-S.SNP.2:29600594 chr02:029600594 0 W/29600594-29600594 FN3821-S SNP A -> G AC=2;AN=190;BQB=0.999481;DP=2614;DP4=1305,1221,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.56078e-15;MQSB=0.89337;RPB=0.932266;SGB=82.301;VDB=0.392992;EFF=INTRON(MODIFIER||||338|LOC_Os02g48350|protein_coding|CODING|LOC_Os02g48350.1|4|1) FN1443-S.SNP.2:29612268 chr02:029612268 0 W/29612268-29612268 FN1443-S Single Base Substitution T-A INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3514-S.SNP.2:29614320 chr02:029614320 0 W/29614320-29614320 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.966974;DP=2729;DP4=1326,1344,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.78803e-07;MQSB=0.993008;RPB=0.918419;SGB=28.8977;VDB=0.984756;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L294|486|LOC_Os02g48370|protein_coding|CODING|LOC_Os02g48370.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L294|486|LOC_Os02g48370|protein_coding|CODING|LOC_Os02g48370.2|5|1) FN-275.SNP.2:29616819 chr02:029616819 0 W/29616819-29616819 FN-275 Single Base Substitution A-G INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. W7-1-1.SNP.2:29625244 chr02:029625244 0 W/29625244-29625244 W7-1-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1176-S.SNP.2:29628631 chr02:029628631 0 W/29628631-29628631 FN1176-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN588-S.SNP.2:29630060 chr02:029630060 0 W/29630060-29630060 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2221-S.SNP.2:29632465 chr02:029632465 0 W/29632465-29632465 FN2221-S SNP G -> T AC=1;AN=190;BQB=0.813917;DP=4370;DP4=1876,2028,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000457666;MQB=8.35637e-09;MQSB=0.135524;RPB=0.387226;SGB=44.0907;VDB=0.0417376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.2:29646484 chr02:029646484 0 W/29646484-29646484 FN1550-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g48410 retrotransposon protein, putative, unclassified, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2137-S.SNP.2:29653389 chr02:029653389 0 W/29653389-29653389 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.886264;DP=1536;DP4=774,726,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00195313;MQB=0.385304;MQSB=6.57009e-14;RPB=0.877079;SGB=2.75988;VDB=0.60546;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P212|1550|LOC_Os02g48420|protein_coding|CODING|LOC_Os02g48420.1|1|1) FN3877-S.SNP.2:29654366 chr02:029654366 0 W/29654366-29654366 FN3877-S SNP T -> C AC=2;AN=158;BQB=0.913948;DP=1959;DP4=907,910,14,11;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.000510465;MQB=1.8523e-11;MQSB=0.786854;RPB=0.999842;SGB=45.1437;VDB=0.139858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.2:29654727 chr02:029654727 0 W/29654727-29654727 FN3626-S SNP G -> T AC=2;AN=190;BQB=0.999426;DP=2103;DP4=777,1224,7,5;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0180694;MQB=0.302588;MQSB=0.589658;RPB=0.452531;SGB=49.0954;VDB=0.242177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.2:29654727 chr02:029654727 0 W/29654727-29654727 FN3877-S SNP G -> T AC=2;AN=158;BQB=0.862143;DP=2245;DP4=914,1227,13,16;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.023608;MQB=0.888719;MQSB=0.950472;RPB=0.986938;SGB=87.9846;VDB=0.735873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.2:29656941 chr02:029656941 0 W/29656941-29656941 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.423906;DP=4598;DP4=2360,1942,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46115e-12;MQSB=0.646763;RPB=0.720546;SGB=104.921;VDB=0.315149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.2:29662998 chr02:029662998 0 W/29662998-29662998 FN2460 SNP G -> A AC=1;AN=200;BQB=0.108151;DP=4437;DP4=2264,1912,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000225378;MQB=1.80968e-11;MQSB=0.529944;RPB=0.830168;SGB=52.9314;VDB=0.00905832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.2:29665128 chr02:029665128 0 W/29665128-29665128 FN2207-S SNP T -> G AC=2;AN=190;BQB=0.478915;DP=2117;DP4=1625,125,23,0;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.46136e-12;MQSB=0.178691;RPB=0.657707;SGB=-11.0065;VDB=0.574382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.2:29665276 chr02:029665276 0 W/29665276-29665276 FN1684-S SNP G -> A AC=1;AN=188;BQB=0.543474;DP=2296;DP4=2012,264,9,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.87478e-07;MQSB=0.885062;RPB=0.824596;SGB=39.8925;VDB=0.0978464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.2:29665678 chr02:029665678 0 W/29665678-29665678 FN2750-S SNP A -> T AC=1;AN=200;BQB=0.695683;DP=5298;DP4=2488,2614,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.23475e-08;MQSB=0.99857;RPB=0.675284;SGB=40.2696;VDB=0.476417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.2:29669388 chr02:029669388 0 W/29669388-29669388 FN1355-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g48450 xylem cysteine proteinase 2 precursor, putative, expressed SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1355-S.SNP.2:29669389 chr02:029669389 0 W/29669389-29669389 FN1355-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2358.SNP.2:29670852 chr02:029670852 0 W/29670852-29670852 FN2358 SNP C -> A AC=1;AN=192;BQB=0.86896;DP=4697;DP4=2229,2233,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.20287e-08;MQSB=0.995163;RPB=0.899986;SGB=28.9139;VDB=0.754011;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L29|506|LOC_Os02g48460|protein_coding|CODING|LOC_Os02g48460.1|1|1) FN1532-S.SNP.2:29674425 chr02:029674425 0 W/29674425-29674425 FN1532-S Single Base Substitution C-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2458.SNP.2:29674425 chr02:029674425 0 W/29674425-29674425 FN2458 SNP C -> T AC=1;AN=200;BQB=0.902737;DP=4558;DP4=2172,2173,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.34293e-10;MQSB=0.993439;RPB=0.964731;SGB=34.6953;VDB=0.706673;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.2:29674425 chr02:029674425 0 W/29674425-29674425 FN922-S Single Base Substitution C-T INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN888-S.SNP.2:29681308 chr02:029681308 0 W/29681308-29681308 FN888-S Single Base Substitution G-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1093-S.SNP.2:29684414 chr02:029684414 0 W/29684414-29684414 FN1093-S Single Base Substitution T-C INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-183.SNP.2:29685399 chr02:029685399 0 W/29685399-29685399 FN-183 Single Base Substitution T-G INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN484-S.SNP.2:29689089 chr02:029689089 0 W/29689089-29689089 FN484-S Single Base Substitution G-A INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN1015-S.SNP.2:29689879 chr02:029689879 0 W/29689879-29689879 FN1015-S Single Base Substitution C-A INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3451-S.SNP.2:29691160 chr02:029691160 0 W/29691160-29691160 FN3451-S SNP A -> T AC=1;AN=184;BQB=0.911604;DP=2902;DP4=1549,1260,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55723e-08;MQSB=0.987434;RPB=0.977628;SGB=53.2642;VDB=0.182601;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.2:29691255 chr02:029691255 0 W/29691255-29691255 FN512-S Single Base Substitution A-G INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2149-S.SNP.2:29691738 chr02:029691738 0 W/29691738-29691738 FN2149-S SNP A -> C AC=2;AN=168;BQB=0.00783267;DP=4166;DP4=2016,2113,18,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.80441e-13;MQSB=0.99348;RPB=0.911023;SGB=-44.6276;VDB=0.692347;EFF=INTERGENIC(MODIFIER||||||||||1) FN777-S.SNP.2:29694454 chr02:029694454 0 W/29694454-29694454 FN777-S Single Base Substitution G-T INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN3389-S.SNP.2:29696029 chr02:029696029 0 W/29696029-29696029 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.893589;DP=3199;DP4=1471,1657,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36555e-08;MQSB=0.737459;RPB=0.112186;SGB=66.8296;VDB=0.509035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.2:29710603 chr02:029710603 0 W/29710603-29710603 FN2607-S SNP T -> G AC=2;AN=198;BQB=0.998803;DP=3954;DP4=1827,1881,14,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.19468e-16;MQSB=0.915137;RPB=0.437054;SGB=-5.5041;VDB=0.398215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.2:29712048 chr02:029712048 0 W/29712048-29712048 FN2164-S SNP A -> C AC=2;AN=168;BQB=0.0143889;DP=3550;DP4=1827,1662,25,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.94732e-20;MQSB=0.978809;RPB=0.991435;SGB=-53.7345;VDB=0.192103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.2:29717152 chr02:029717152 0 W/29717152-29717152 FN3056-S SNP G -> C AC=2;AN=184;BQB=0.86264;DP=2860;DP4=1578,1132,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.44926e-11;MQSB=0.855128;RPB=0.0920037;SGB=45.9712;VDB=0.104419;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.2:29721856 chr02:029721856 0 W/29721856-29721856 FN2426 SNP G -> A AC=1;AN=200;BQB=0.983341;DP=4286;DP4=2052,2050,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.14893e-09;MQSB=0.989038;RPB=0.900043;SGB=54.6902;VDB=0.998497;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.2:29727250 chr02:029727250 0 W/29727250-29727250 FN587-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3777-S.SNP.2:29734314 chr02:029734314 0 W/29734314-29734314 FN3777-S SNP A -> T AC=1;AN=190;BQB=0.534676;DP=3225;DP4=1466,1592,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.18323e-07;MQSB=0.981874;RPB=0.983203;SGB=8.77275;VDB=0.393493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.2:29734565 chr02:029734565 0 W/29734565-29734565 FN2224-S SNP T -> C AC=1;AN=190;BQB=0.728629;DP=4724;DP4=2162,2148,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26651e-13;MQSB=0.634937;RPB=0.473755;SGB=82.301;VDB=0.214563;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.2:29735443 chr02:029735443 0 W/29735443-29735443 FN918-S Single Base Substitution C-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN875-S.SNP.2:29735607 chr02:029735607 0 W/29735607-29735607 FN875-S Single Base Substitution G-T INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN875-S.SNP.2:29735608 chr02:029735608 0 W/29735608-29735608 FN875-S Single Base Substitution G-A INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1633-S.SNP.2:29735826 chr02:029735826 0 W/29735826-29735826 FN1633-S Single Base Substitution C-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3056-S.SNP.2:29735826 chr02:029735826 0 W/29735826-29735826 FN3056-S SNP C -> A AC=2;AN=184;BQB=0.495978;DP=1664;DP4=917,600,14,4;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0;MQB=3.735e-07;MQSB=1.45986e-13;RPB=0.429228;SGB=75.8731;VDB=0.00750672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.2:29735826 chr02:029735826 0 W/29735826-29735826 FN3451-S SNP C -> A AC=2;AN=184;BQB=0.943391;DP=1603;DP4=909,584,7,3;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.00062383;MQB=0.14736;MQSB=7.30383e-09;RPB=0.999147;SGB=39.699;VDB=0.740471;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.2:29739202 chr02:029739202 0 W/29739202-29739202 FN447-S Single Base Substitution C-T INTRON HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN1368-S.SNP.2:29739845 chr02:029739845 0 W/29739845-29739845 FN1368-S Single Base Substitution A-T INTRON HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4177-S.SNP.2:29740569 chr02:029740569 0 W/29740569-29740569 FN4177-S SNP A -> T AC=1;AN=170;BQB=0.691782;DP=2539;DP4=1310,1167,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.84742e-06;MQSB=0.919451;RPB=0.990432;SGB=34.878;VDB=0.823453;EFF=INTRON(MODIFIER||||584|LOC_Os02g48570|protein_coding|CODING|LOC_Os02g48570.1|3|1) FN743-S.SNP.2:29741457 chr02:029741457 0 W/29741457-29741457 FN743-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN972-S.SNP.2:29748783 chr02:029748783 0 W/29748783-29748783 FN972-S Single Base Substitution G-C INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN_N1-169-1.SNP.2:29753382 chr02:029753382 0 W/29753382-29753382 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1685-S.SNP.2:29754800 chr02:029754800 0 W/29754800-29754800 FN1685-S SNP G -> T AC=1;AN=188;BQB=0.890176;DP=2085;DP4=701,1334,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7033e-08;MQSB=0.997623;RPB=0.778974;SGB=28.6195;VDB=0.410713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.2:29759412 chr02:029759412 0 W/29759412-29759412 FN3464-S SNP A -> G AC=1;AN=184;BQB=0.643078;DP=2257;DP4=1129,1022,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00074253;MQSB=0.906028;RPB=0.52823;SGB=8.14452;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.2:29759634 chr02:029759634 0 W/29759634-29759634 FN864-S Single Base Substitution A-G INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2701-S.SNP.2:29760710 chr02:029760710 0 W/29760710-29760710 FN2701-S SNP A -> C AC=1;AN=200;BQB=0.402471;DP=5045;DP4=2434,2331,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.63864e-15;MQSB=0.730377;RPB=0.955335;SGB=-5.24302;VDB=0.295282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3658-S.SNP.2:29767717 chr02:029767717 0 W/29767717-29767717 FN3658-S SNP T -> A AC=1;AN=190;BQB=0.990049;DP=3156;DP4=1475,1606,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79833e-07;MQSB=0.794626;RPB=0.995329;SGB=44.5415;VDB=0.650903;EFF=INTRON(MODIFIER||||1426|LOC_Os02g48620|protein_coding|CODING|LOC_Os02g48620.1|18|1),INTRON(MODIFIER||||1426|LOC_Os02g48620|protein_coding|CODING|LOC_Os02g48620.2|18|1) FN3871-S.SNP.2:29775951 chr02:029775951 0 W/29775951-29775951 FN3871-S SNP T -> C AC=1;AN=158;BQB=0.998532;DP=2612;DP4=1032,1438,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.35529e-06;MQSB=0.910173;RPB=0.93298;SGB=11.9715;VDB=0.850179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.2:29775953 chr02:029775953 0 W/29775953-29775953 FN3871-S SNP T -> C AC=1;AN=158;BQB=0.890145;DP=2616;DP4=1056,1493,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.20101e-07;MQSB=0.966659;RPB=0.70987;SGB=23.9652;VDB=0.726254;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.2:29779336 chr02:029779336 0 W/29779336-29779336 FN722-S Single Base Substitution T-A INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN682-S.SNP.2:29784452 chr02:029784452 0 W/29784452-29784452 FN682-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g48630 expressed protein SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN1415-S.SNP.2:29789167 chr02:029789167 0 W/29789167-29789167 FN1415-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g48640 expressed protein SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN266-S.SNP.2:29810607 chr02:029810607 0 W/29810607-29810607 FN266-S Single Base Substitution T-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2361.SNP.2:29811018 chr02:029811018 0 W/29811018-29811018 FN2361 SNP A -> G AC=2;AN=192;BQB=0.792856;DP=5627;DP4=2862,2412,36,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.03977e-41;MQSB=0.999679;RPB=0.591834;SGB=257.205;VDB=0.834777;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.2:29811538 chr02:029811538 0 W/29811538-29811538 FN3465-S SNP G -> A AC=1;AN=184;BQB=0.998656;DP=2794;DP4=1344,1320,15,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00035791;MQB=4.38681e-17;MQSB=0.736197;RPB=0.969474;SGB=125.613;VDB=0.172354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.2:29811539 chr02:029811539 0 W/29811539-29811539 FN3465-S SNP C -> A AC=1;AN=184;BQB=0.858669;DP=2790;DP4=1381,1306,15,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000358423;MQB=1.03329e-16;MQSB=0.799512;RPB=0.988991;SGB=88.5747;VDB=0.0944221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.2:29811540 chr02:029811540 0 W/29811540-29811540 FN3465-S SNP A -> C AC=1;AN=184;BQB=0.842193;DP=2797;DP4=1389,1284,14,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000357526;MQB=4.17056e-16;MQSB=0.808006;RPB=0.998345;SGB=92.0965;VDB=0.13083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.2:29815349 chr02:029815349 0 W/29815349-29815349 FN2096-S SNP T -> A AC=1;AN=168;BQB=0.993812;DP=4541;DP4=2343,2151,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85072e-12;MQSB=0.872109;RPB=0.998829;SGB=62.1945;VDB=0.261151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.2:29819655 chr02:029819655 0 W/29819655-29819655 FN3940-S SNP G -> C AC=1;AN=158;BQB=0.944571;DP=2382;DP4=1135,1109,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.17393e-05;MQSB=0.869702;RPB=0.986869;SGB=29.5899;VDB=0.237012;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.2:29820274 chr02:029820274 0 W/29820274-29820274 FN_546-3-1 Single Base Substitution C-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2611-S.SNP.2:29822752 chr02:029822752 0 W/29822752-29822752 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.736027;DP=4982;DP4=2495,2228,16,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.52574e-21;MQSB=0.940354;RPB=0.873016;SGB=141.763;VDB=0.036858;EFF=INTRON(MODIFIER||||382|LOC_Os02g48720|protein_coding|CODING|LOC_Os02g48720.1|1|1),INTRON(MODIFIER||||382|LOC_Os02g48720|protein_coding|CODING|LOC_Os02g48720.2|1|1) FN2611-S.SNP.2:29822753 chr02:029822753 0 W/29822753-29822753 FN2611-S SNP T -> A AC=1;AN=200;BQB=0.999993;DP=4976;DP4=2539,2213,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28585e-20;MQSB=0.924846;RPB=0.536011;SGB=33.5675;VDB=0.0287452;EFF=INTRON(MODIFIER||||382|LOC_Os02g48720|protein_coding|CODING|LOC_Os02g48720.1|1|1),INTRON(MODIFIER||||382|LOC_Os02g48720|protein_coding|CODING|LOC_Os02g48720.2|1|1) FN1514-S.SNP.2:29823842 chr02:029823842 0 W/29823842-29823842 FN1514-S Single Base Substitution T-C INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1559-S.SNP.2:29830175 chr02:029830175 0 W/29830175-29830175 FN1559-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2462.SNP.2:29830543 chr02:029830543 0 W/29830543-29830543 FN2462 SNP C -> T AC=1;AN=200;BQB=0.992265;DP=4735;DP4=2479,2031,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53999e-09;MQSB=0.742319;RPB=0.489475;SGB=43.8747;VDB=0.191663;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.2:29831020 chr02:029831020 0 W/29831020-29831020 FN568-S Single Base Substitution C-A INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN568-S.SNP.2:29831038 chr02:029831038 0 W/29831038-29831038 FN568-S Single Base Substitution G-A INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN568-S.SNP.2:29831039 chr02:029831039 0 W/29831039-29831039 FN568-S Single Base Substitution C-T INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3854-S.SNP.2:29832751 chr02:029832751 0 W/29832751-29832751 FN3854-S SNP T -> G AC=1;AN=158;BQB=0.343109;DP=2014;DP4=989,941,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.06473e-07;MQSB=0.890868;RPB=0.973022;SGB=-16.9075;VDB=0.605367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.2:29838237 chr02:029838237 0 W/29838237-29838237 FN2483 SNP T -> C AC=1;AN=200;BQB=0.573586;DP=4526;DP4=2025,2059,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000441891;MQB=2.99297e-10;MQSB=0.254844;RPB=0.197127;SGB=51.0851;VDB=0.624759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.2:29842139 chr02:029842139 0 W/29842139-29842139 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.997995;DP=3119;DP4=1573,1411,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.96535e-06;MQSB=0.993026;RPB=0.996313;SGB=21.8853;VDB=0.395707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.2:29844400 chr02:029844400 0 W/29844400-29844400 FN1333-S Single Base Substitution C-A INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2117-S.SNP.2:29845597 chr02:029845597 0 W/29845597-29845597 FN2117-S SNP C -> T AC=1;AN=168;BQB=0.729652;DP=2221;DP4=1286,874,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00247165;MQSB=0.991803;RPB=0.90019;SGB=-18.3882;VDB=0.846412;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.2:29848678 chr02:029848678 0 W/29848678-29848678 FN4088-S SNP G -> C AC=1;AN=182;BQB=0.974978;DP=3155;DP4=1393,1718,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.03221e-06;MQSB=0.990175;RPB=0.875427;SGB=35.0899;VDB=0.525142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.2:29851020 chr02:029851020 0 W/29851020-29851020 FN2478 SNP G -> C AC=2;AN=200;BQB=0.886775;DP=4098;DP4=1909,1925,16,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.10251e-26;MQSB=0.96387;RPB=0.828741;SGB=102.43;VDB=0.876521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E78Q|380|LOC_Os02g48770|protein_coding|CODING|LOC_Os02g48770.1|2|1) FN3918-S.SNP.2:29857463 chr02:029857463 0 W/29857463-29857463 FN3918-S SNP A -> T AC=1;AN=158;BQB=0.88227;DP=2600;DP4=1225,1297,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.71145e-05;MQSB=0.987021;RPB=0.984086;SGB=17.2267;VDB=0.639818;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.2:29857595 chr02:029857595 0 W/29857595-29857595 FN337-S Single Base Substitution T-A INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3507-S.SNP.2:29857595 chr02:029857595 0 W/29857595-29857595 FN3507-S SNP T -> A AC=1;AN=188;BQB=0.914326;DP=2804;DP4=1356,1382,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4849e-06;MQSB=0.76815;RPB=0.901177;SGB=10.8165;VDB=0.294276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.2:29860305 chr02:029860305 0 W/29860305-29860305 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.970903;DP=2690;DP4=1209,1387,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19649e-05;MQSB=0.999679;RPB=0.348852;SGB=30.8803;VDB=0.116387;EFF=INTRON(MODIFIER||||848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.2|1|1),INTRON(MODIFIER||||842|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.5|1|1),INTRON(MODIFIER||||848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.1|1|1),INTRON(MODIFIER||||828|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.4|1|1) FN3691-S.SNP.2:29860309 chr02:029860309 0 W/29860309-29860309 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.967343;DP=2671;DP4=1222,1363,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.97258e-05;MQSB=0.719927;RPB=0.284992;SGB=21.8853;VDB=0.100903;EFF=INTRON(MODIFIER||||848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.2|1|1),INTRON(MODIFIER||||842|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.5|1|1),INTRON(MODIFIER||||848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.1|1|1),INTRON(MODIFIER||||828|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.4|1|1) FN514-S.SNP.2:29861427 chr02:029861427 0 W/29861427-29861427 FN514-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g48790 AML1, putative, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN514-S.SNP.2:29861428 chr02:029861428 0 W/29861428-29861428 FN514-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g48790 AML1, putative, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN778-S.SNP.2:29864978 chr02:029864978 0 W/29864978-29864978 FN778-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g48790 AML1, putative, expressed SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1575-S.SNP.2:29865132 chr02:029865132 0 W/29865132-29865132 FN1575-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g48790 AML1, putative, expressed SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3785-S.SNP.2:29865869 chr02:029865869 0 W/29865869-29865869 FN3785-S SNP G -> T AC=1;AN=190;BQB=0.390833;DP=2757;DP4=1278,1388,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15529e-05;MQSB=0.975764;RPB=0.927848;SGB=23.6597;VDB=0.776945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G641C|848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G641C|848|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G621C|828|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.3|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G621C|828|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.4|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G641C|842|LOC_Os02g48790|protein_coding|CODING|LOC_Os02g48790.5|9|1) FN1499-S.SNP.2:29878140 chr02:029878140 0 W/29878140-29878140 FN1499-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN_822-5-1.SNP.2:29887463 chr02:029887463 0 W/29887463-29887463 FN_822-5-1 Single Base Substitution G-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN733-S.SNP.2:29889845 chr02:029889845 0 W/29889845-29889845 FN733-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN355-S.SNP.2:29898247 chr02:029898247 0 W/29898247-29898247 FN355-S Single Base Substitution G-A INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN831-S.SNP.2:29898524 chr02:029898524 0 W/29898524-29898524 FN831-S Single Base Substitution G-A INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2460.SNP.2:29899066 chr02:029899066 0 W/29899066-29899066 FN2460 SNP T -> A AC=1;AN=200;BQB=0.876005;DP=4691;DP4=2171,2251,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84429e-13;MQSB=0.837771;RPB=0.811702;SGB=91.1059;VDB=0.256667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.2:29899140 chr02:029899140 0 W/29899140-29899140 FN1441-S Single Base Substitution T-A INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1302-S.SNP.2:29899485 chr02:029899485 0 W/29899485-29899485 FN1302-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2536-S.SNP.2:29909884 chr02:029909884 0 W/29909884-29909884 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.500824;DP=4541;DP4=2391,1927,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.63897e-05;MQSB=0.00198325;RPB=0.220017;SGB=18.5788;VDB=0.378188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.2:29911190 chr02:029911190 0 W/29911190-29911190 FN-201 Single Base Substitution G-T INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN3504-S.SNP.2:29919230 chr02:029919230 0 W/29919230-29919230 FN3504-S SNP C -> A AC=1;AN=188;BQB=0.575944;DP=2852;DP4=1394,1395,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00194586;MQSB=0.999597;RPB=0.79429;SGB=18.2682;VDB=0.0831545;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.2:29920515 chr02:029920515 0 W/29920515-29920515 W472-5-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1561-S.SNP.2:29921110 chr02:029921110 0 W/29921110-29921110 FN1561-S Single Base Substitution T-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3675-S.SNP.2:29949909 chr02:029949909 0 W/29949909-29949909 FN3675-S SNP A -> G AC=2;AN=190;BQB=0.916421;DP=2634;DP4=1127,1293,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.35449e-10;MQSB=0.997395;RPB=0.608744;SGB=57.4238;VDB=0.683616;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.2:29967274 chr02:029967274 0 W/29967274-29967274 FN-53 Single Base Substitution C-T INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1031-S.SNP.2:29970496 chr02:029970496 0 W/29970496-29970496 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN673-S.SNP.2:29972400 chr02:029972400 0 W/29972400-29972400 FN673-S Single Base Substitution G-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1250-S.SNP.2:29976362 chr02:029976362 0 W/29976362-29976362 FN1250-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1704-S.SNP.2:29976584 chr02:029976584 0 W/29976584-29976584 FN1704-S SNP C -> T AC=1;AN=188;BQB=0.26055;DP=3762;DP4=2044,1684,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0170122;MQB=0.0779231;MQSB=2.4254e-10;RPB=0.925479;SGB=-58.9891;VDB=0.940893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.2:29978106 chr02:029978106 0 W/29978106-29978106 FN2308 SNP C -> G AC=1;AN=192;BQB=0.920444;DP=4895;DP4=2301,2345,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.35454e-12;MQSB=0.97429;RPB=0.239148;SGB=90.2896;VDB=0.250752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tCg|W112S|218|LOC_Os02g49030|protein_coding|CODING|LOC_Os02g49030.1|2|1) FN2114-S.SNP.2:29983278 chr02:029983278 0 W/29983278-29983278 FN2114-S SNP G -> T AC=2;AN=168;BQB=0.93583;DP=3631;DP4=1787,1800,20,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.05557e-13;MQSB=0.994152;RPB=0.677222;SGB=24.2221;VDB=0.6471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.2:30006579 chr02:030006579 0 W/30006579-30006579 FN2213-S SNP T -> C AC=1;AN=190;BQB=0.7877;DP=5080;DP4=2147,2468,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12029e-07;MQSB=0.961275;RPB=0.324206;SGB=18.552;VDB=0.568959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.2:30007821 chr02:030007821 0 W/30007821-30007821 FN1475-S Single Base Substitution G-A INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN754-S.SNP.2:30008381 chr02:030008381 0 W/30008381-30008381 FN754-S Single Base Substitution G-T INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN983-S.SNP.2:30008590 chr02:030008590 0 W/30008590-30008590 FN983-S Single Base Substitution T-C INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1725-S.SNP.2:30018487 chr02:030018487 0 W/30018487-30018487 FN1725-S SNP T -> C AC=1;AN=188;BQB=0.922917;DP=3965;DP4=1979,1944,21,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.91676e-16;MQSB=0.999298;RPB=0.634146;SGB=-5.76375;VDB=0.455492;EFF=INTRON(MODIFIER||||1339|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.1|7|1),INTRON(MODIFIER||||1117|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.2|7|1) FN3968-S.SNP.2:30018839 chr02:030018839 0 W/30018839-30018839 FN3968-S SNP T -> C AC=1;AN=168;BQB=0.972324;DP=2510;DP4=1257,1158,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.35096e-09;MQSB=0.978295;RPB=0.44836;SGB=65.4653;VDB=0.45851;EFF=INTRON(MODIFIER||||1339|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.1|7|1),INTRON(MODIFIER||||1117|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.2|7|1) FN4071-S.SNP.2:30021471 chr02:030021471 0 W/30021471-30021471 FN4071-S SNP G -> A AC=1;AN=182;BQB=0.991352;DP=2912;DP4=1300,1562,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.85806e-07;MQSB=0.989767;RPB=0.43962;SGB=39.6007;VDB=0.42619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L572F|1339|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L572F|1117|LOC_Os02g49090|protein_coding|CODING|LOC_Os02g49090.2|6|1) W252-6-1.SNP.2:30026343 chr02:030026343 0 W/30026343-30026343 W252-6-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g49100 retrotransposon protein, putative, unclassified SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN_770-6-1.SNP.2:30028139 chr02:030028139 0 W/30028139-30028139 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN367-S.SNP.2:30032908 chr02:030032908 0 W/30032908-30032908 FN367-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3902-S.SNP.2:30033062 chr02:030033062 0 W/30033062-30033062 FN3902-S SNP G -> T AC=1;AN=158;BQB=0.409629;DP=2801;DP4=1249,1452,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=9.49699e-06;MQSB=0.0294753;RPB=0.425858;SGB=23.8187;VDB=0.154585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S15Y|383|LOC_Os02g49110|protein_coding|CODING|LOC_Os02g49110.1|1|1) FN2437.SNP.2:30043982 chr02:030043982 0 W/30043982-30043982 FN2437 SNP T -> G AC=1;AN=200;BQB=0.282484;DP=5061;DP4=2353,2471,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31348e-18;MQSB=0.16513;RPB=0.944326;SGB=68.5625;VDB=0.294733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.2:30045575 chr02:030045575 0 W/30045575-30045575 FN3462-S SNP T -> A AC=2;AN=184;BQB=0.128352;DP=2132;DP4=652,692,13,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=0.00212917;MQSB=0.0844634;RPB=0.316157;SGB=-35.7521;VDB=0.963581;EFF=INTRON(MODIFIER||||131|LOC_Os02g49130|protein_coding|CODING|LOC_Os02g49130.1|1|1) FN3687-S.SNP.2:30050360 chr02:030050360 0 W/30050360-30050360 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.939923;DP=3141;DP4=1362,1660,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.88601e-07;MQSB=0.956029;RPB=0.855591;SGB=62.7569;VDB=0.79841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.2:30051249 chr02:030051249 0 W/30051249-30051249 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.979644;DP=3135;DP4=1687,1354,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.68667e-05;MQSB=0.780171;RPB=0.817032;SGB=35.4339;VDB=0.433802;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.2:30059508 chr02:030059508 0 W/30059508-30059508 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN2649-S.SNP.2:30060404 chr02:030060404 0 W/30060404-30060404 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.995442;DP=5015;DP4=2520,2267,11,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000199402;MQB=5.25105e-07;MQSB=0.104645;RPB=0.766225;SGB=54.6902;VDB=0.901215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.2:30069553 chr02:030069553 0 W/30069553-30069553 FN2181-S SNP A -> C AC=2;AN=190;BQB=0.400271;DP=4871;DP4=2378,2301,17,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.42679e-18;MQSB=0.890554;RPB=0.995378;SGB=131.065;VDB=0.0188975;EFF=INTRON(MODIFIER||||327|LOC_Os02g49180|protein_coding|CODING|LOC_Os02g49180.1|5|1) FN743-S.SNP.2:30071482 chr02:030071482 0 W/30071482-30071482 FN743-S Single Base Substitution T-A INTRON HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN3345-S.SNP.2:30075691 chr02:030075691 0 W/30075691-30075691 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.950338;DP=3104;DP4=1587,1400,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.5424e-10;MQSB=0.977551;RPB=0.99899;SGB=25.7969;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.2:30077003 chr02:030077003 0 W/30077003-30077003 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.580266;DP=2699;DP4=1266,1312,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.86756e-05;MQSB=0.999885;RPB=0.755117;SGB=23.6597;VDB=0.687803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.2:30080099 chr02:030080099 0 W/30080099-30080099 FN1150-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os02g49200 hypothetical protein SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2253-S.SNP.2:30086384 chr02:030086384 0 W/30086384-30086384 FN2253-S SNP T -> A AC=1;AN=190;BQB=0.999815;DP=5027;DP4=2385,2395,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000397852;MQB=2.54994e-06;MQSB=0.965307;RPB=0.991211;SGB=-0.550503;VDB=0.371164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.2:30088814 chr02:030088814 0 W/30088814-30088814 FN2181-S SNP C -> T AC=2;AN=190;BQB=0.488732;DP=4889;DP4=2356,2031,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204541;MQB=9.88782e-20;MQSB=0.994052;RPB=0.489087;SGB=-0.482811;VDB=0.466642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.2:30099548 chr02:030099548 0 W/30099548-30099548 FN2271-S SNP T -> C AC=1;AN=190;BQB=0.961032;DP=3438;DP4=889,1884,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.77577e-07;MQSB=0.990695;RPB=0.987081;SGB=-11.5603;VDB=0.163246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H165R|242|LOC_Os02g49240|protein_coding|CODING|LOC_Os02g49240.1|1|1),UTR_3_PRIME(MODIFIER||968||407|LOC_Os02g49230|protein_coding|CODING|LOC_Os02g49230.1|5|1),UTR_3_PRIME(MODIFIER||968||480|LOC_Os02g49230|protein_coding|CODING|LOC_Os02g49230.2|7|1),UTR_3_PRIME(MODIFIER||968||407|LOC_Os02g49230|protein_coding|CODING|LOC_Os02g49230.3|6|1),UTR_3_PRIME(MODIFIER||968||406|LOC_Os02g49230|protein_coding|CODING|LOC_Os02g49230.5|6|1),UTR_3_PRIME(MODIFIER||968||407|LOC_Os02g49230|protein_coding|CODING|LOC_Os02g49230.6|6|1) FN1388-S.SNP.2:30102944 chr02:030102944 0 W/30102944-30102944 FN1388-S Single Base Substitution G-C INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1439-S.SNP.2:30103250 chr02:030103250 0 W/30103250-30103250 FN1439-S Single Base Substitution G-T INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN938-S.SNP.2:30112908 chr02:030112908 0 W/30112908-30112908 FN938-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2739-S.SNP.2:30113694 chr02:030113694 0 W/30113694-30113694 FN2739-S SNP T -> A AC=1;AN=200;BQB=0.862278;DP=4411;DP4=2233,2011,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000226706;MQB=6.80891e-10;MQSB=0.87066;RPB=0.644137;SGB=34.6953;VDB=0.54253;EFF=INTRON(MODIFIER||||693|LOC_Os02g49270|protein_coding|CODING|LOC_Os02g49270.1|12|1) FN2584-S.SNP.2:30114590 chr02:030114590 0 W/30114590-30114590 FN2584-S SNP T -> G AC=1;AN=198;BQB=0.179342;DP=3964;DP4=1926,1832,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.01856e-19;MQSB=0.695177;RPB=0.44443;SGB=146.046;VDB=0.792753;EFF=INTRON(MODIFIER||||693|LOC_Os02g49270|protein_coding|CODING|LOC_Os02g49270.1|15|1) FN3990-S.SNP.2:30116542 chr02:030116542 0 W/30116542-30116542 FN3990-S SNP G -> T AC=1;AN=168;BQB=0.464533;DP=2792;DP4=1384,1280,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62404e-11;MQSB=0.983568;RPB=0.73494;SGB=53.7853;VDB=0.888829;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.2:30118310 chr02:030118310 0 W/30118310-30118310 FN713-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN713-S.SNP.2:30118311 chr02:030118311 0 W/30118311-30118311 FN713-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN-256.SNP.2:30145298 chr02:030145298 0 W/30145298-30145298 FN-256 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN_398-1.SNP.2:30148524 chr02:030148524 0 W/30148524-30148524 FN_398-1 Single Base Substitution G-C UTR_3_PRIME HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN2560-S.SNP.2:30164044 chr02:030164044 0 W/30164044-30164044 FN2560-S SNP T -> C AC=2;AN=198;BQB=0.288136;DP=4383;DP4=2192,1950,8,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.10377e-09;MQSB=0.901761;RPB=0.982193;SGB=26.7492;VDB=0.420122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.2:30164250 chr02:030164250 0 W/30164250-30164250 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.00349037;DP=4926;DP4=2474,2151,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.78265e-08;MQSB=0.991533;RPB=0.863008;SGB=7.88476;VDB=0.219632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.2:30164251 chr02:030164251 0 W/30164251-30164251 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.460979;DP=4926;DP4=2475,2158,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.5745e-10;MQSB=1;RPB=0.760777;SGB=43.8747;VDB=0.192969;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.2:30166437 chr02:030166437 0 W/30166437-30166437 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1684-S.SNP.2:30171544 chr02:030171544 0 W/30171544-30171544 FN1684-S SNP G -> T AC=1;AN=188;BQB=0.652368;DP=1972;DP4=1115,815,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.26049e-09;MQSB=0.965927;RPB=0.892656;SGB=53.7007;VDB=0.662306;EFF=SPLICE_SITE_REGION(LOW||||602|LOC_Os02g49380|protein_coding|CODING|LOC_Os02g49380.1|6|1),INTRON(MODIFIER||||602|LOC_Os02g49380|protein_coding|CODING|LOC_Os02g49380.1|6|1) FN3437-S.SNP.2:30176294 chr02:030176294 0 W/30176294-30176294 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.967192;DP=3367;DP4=1646,1625,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.66997e-12;MQSB=0.995499;RPB=0.969185;SGB=93.9603;VDB=0.970978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1837K|1841|LOC_Os02g49390|protein_coding|CODING|LOC_Os02g49390.1|6|1) FN762-S.SNP.2:30176294 chr02:030176294 0 W/30176294-30176294 FN762-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g49390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN-408.SNP.2:30178052 chr02:030178052 0 W/30178052-30178052 FN-408 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g49390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.2:30178052 chr02:030178052 0 W/30178052-30178052 FN408-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g49390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2408.SNP.2:30186245 chr02:030186245 0 W/30186245-30186245 FN2408 SNP G -> A AC=1;AN=200;BQB=0.956142;DP=5669;DP4=2178,3209,7,8;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0871406;MQB=0.995926;MQSB=0;RPB=0.776663;SGB=24.2746;VDB=0.887499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V681I|1175|LOC_Os02g49400|protein_coding|CODING|LOC_Os02g49400.1|3|1) FN513-S.SNP.2:30187876 chr02:030187876 0 W/30187876-30187876 FN513-S Single Base Substitution C-A INTRON HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN4272-S.SNP.2:30188885 chr02:030188885 0 W/30188885-30188885 FN4272-S SNP A -> G AC=1;AN=170;BQB=0.967571;DP=2299;DP4=1345,792,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.76681e-08;MQSB=0.254398;RPB=0.479529;SGB=17.4413;VDB=0.935729;EFF=INTRON(MODIFIER||||1175|LOC_Os02g49400|protein_coding|CODING|LOC_Os02g49400.1|5|1) FN1278-S.SNP.2:30190365 chr02:030190365 0 W/30190365-30190365 FN1278-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN454-S.SNP.2:30195096 chr02:030195096 0 W/30195096-30195096 FN454-S Single Base Substitution C-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3105-S.SNP.2:30204504 chr02:030204504 0 W/30204504-30204504 FN3105-S SNP A -> C AC=1;AN=184;BQB=0.980465;DP=3369;DP4=1690,1572,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32539e-05;MQSB=0.977205;RPB=0.993237;SGB=39.699;VDB=0.667402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.2:30211191 chr02:030211191 0 W/30211191-30211191 FN1247-S Single Base Substitution A-G INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN2687-S.SNP.2:30212386 chr02:030212386 0 W/30212386-30212386 FN2687-S SNP T -> C AC=1;AN=200;BQB=0.789311;DP=4653;DP4=2095,2273,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00042983;MQB=3.4481e-08;MQSB=0.411028;RPB=0.972142;SGB=63.4749;VDB=0.553202;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.2:30212678 chr02:030212678 0 W/30212678-30212678 FN566-S Single Base Substitution T-A INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1022-S.SNP.2:30218480 chr02:030218480 0 W/30218480-30218480 FN1022-S Single Base Substitution C-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3280-S.SNP.2:30234027 chr02:030234027 0 W/30234027-30234027 FN3280-S SNP C -> T AC=2;AN=184;BQB=0.996672;DP=2840;DP4=1170,1538,14,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.44121e-16;MQSB=0.997581;RPB=0.995773;SGB=134.656;VDB=0.523969;EFF=INTRON(MODIFIER||||387|LOC_Os02g49480|protein_coding|CODING|LOC_Os02g49480.1|7|1) FN4272-S.SNP.2:30236095 chr02:030236095 0 W/30236095-30236095 FN4272-S SNP A -> C AC=1;AN=170;BQB=0.990689;DP=2309;DP4=1367,755,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.78984e-10;MQSB=0.916676;RPB=0.739082;SGB=45.206;VDB=0.0112131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.2:30237275 chr02:030237275 0 W/30237275-30237275 FN2435 SNP G -> A AC=1;AN=200;BQB=0.968704;DP=3880;DP4=1713,1848,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.60406e-07;MQSB=0.523585;RPB=0.936519;SGB=36.6644;VDB=0.171424;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.2:30239532 chr02:030239532 0 W/30239532-30239532 FN691-S Single Base Substitution T-A INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3692-S.SNP.2:30253441 chr02:030253441 0 W/30253441-30253441 FN3692-S SNP G -> C AC=1;AN=190;BQB=0.967348;DP=3510;DP4=1587,1818,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.291168;MQB=0.0197;MQSB=2.68657e-09;RPB=0.531737;SGB=44.5415;VDB=0.717752;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.2:30261584 chr02:030261584 0 W/30261584-30261584 FN858-S Single Base Substitution T-A INTRON HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2380.SNP.2:30261654 chr02:030261654 0 W/30261654-30261654 FN2380 SNP T -> C AC=1;AN=192;BQB=0.179326;DP=4955;DP4=2434,2096,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.77785e-11;MQSB=0.216284;RPB=0.415867;SGB=-36.6348;VDB=0.260024;EFF=INTRON(MODIFIER||||448|LOC_Os02g49510|protein_coding|CODING|LOC_Os02g49510.1|4|1) FN3057-S.SNP.2:30270683 chr02:030270683 0 W/30270683-30270683 FN3057-S SNP T -> C AC=1;AN=184;BQB=0.696818;DP=4224;DP4=1997,1946,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000612641;MQSB=0.283747;RPB=0.759505;SGB=18.2315;VDB=0.104098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I634T|973|LOC_Os02g49520|protein_coding|CODING|LOC_Os02g49520.1|4|1) FN2429.SNP.2:30276733 chr02:030276733 0 W/30276733-30276733 FN2429 SNP T -> C AC=1;AN=200;BQB=0.726793;DP=4507;DP4=2015,2298,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65089e-14;MQSB=0.969504;RPB=0.773348;SGB=100.316;VDB=0.724281;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V104|135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V104|135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|4|1) FN-129.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN-129 Single Base Substitution G-T INTRON HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-277.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN-277 Single Base Substitution G-T INTRON HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-344.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN-344 Single Base Substitution G-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-53.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN-53 Single Base Substitution G-T INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1067-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN1067-S Single Base Substitution G-T INTRON HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1399-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN1399-S Single Base Substitution G-T INTRON HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1545-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN1545-S Single Base Substitution G-T INTRON HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1652-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN1652-S Single Base Substitution G-T INTRON Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN1742-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN1742-S SNP G -> T AC=2;AN=188;BQB=0.240437;DP=3730;DP4=1806,1860,18,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.39582e-18;MQSB=0.924854;RPB=0.722881;SGB=-147.858;VDB=0.45805;EFF=INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|3|1) FN2183-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN2183-S SNP G -> T AC=2;AN=190;BQB=0.259438;DP=4639;DP4=2164,2123,42,39;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000215564;MQB=5.87589e-39;MQSB=0.74634;RPB=0.63184;SGB=86.8178;VDB=0.487658;EFF=INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|3|1) FN2473.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN2473 SNP G -> T AC=2;AN=200;BQB=0.0864487;DP=4872;DP4=2300,2248,17,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.56732e-11;MQSB=0.848553;RPB=0.305775;SGB=-40.8432;VDB=0.945511;EFF=INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|3|1) FN3627-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN3627-S SNP G -> T AC=2;AN=190;BQB=0.861969;DP=2695;DP4=1268,1294,22,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.54228e-18;MQSB=0.617899;RPB=0.637282;SGB=114.286;VDB=0.798466;EFF=INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|3|1) FN3923-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN3923-S SNP G -> T AC=1;AN=158;BQB=0.589775;DP=2028;DP4=973,962,13,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.18469e-09;MQSB=0.448266;RPB=0.89053;SGB=30.927;VDB=0.763361;EFF=INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.1|2|1),INTRON(MODIFIER||||135|LOC_Os02g49530|protein_coding|CODING|LOC_Os02g49530.2|3|1) FN619-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN619-S Single Base Substitution G-T INTRON HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN796-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN796-S Single Base Substitution G-T INTRON HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN960-S.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 FN960-S Single Base Substitution G-T INTRON HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. W674-4-1.SNP.2:30277452 chr02:030277452 0 W/30277452-30277452 W674-4-1 Single Base Substitution G-T INTRON HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3445-S.SNP.2:30279597 chr02:030279597 0 W/30279597-30279597 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.997934;DP=3222;DP4=1806,1279,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.26575e-07;MQSB=0.891376;RPB=0.891289;SGB=18.2315;VDB=0.434484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.2:30280077 chr02:030280077 0 W/30280077-30280077 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.995635;DP=4880;DP4=2309,2289,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.65003e-11;MQSB=0.0895602;RPB=0.914918;SGB=86.5007;VDB=0.907996;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.2:30281723 chr02:030281723 0 W/30281723-30281723 FN4182-S SNP A -> C AC=1;AN=170;BQB=0.893654;DP=2701;DP4=1218,1344,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.56642e-08;MQSB=0.990654;RPB=0.974612;SGB=47.8722;VDB=0.487101;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.2:30286283 chr02:030286283 0 W/30286283-30286283 FN449-S Single Base Substitution G-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN840-S.SNP.2:30287987 chr02:030287987 0 W/30287987-30287987 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN956-S.SNP.2:30298962 chr02:030298962 0 W/30298962-30298962 FN956-S Single Base Substitution G-A INTRON HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN4137-S.SNP.2:30299938 chr02:030299938 0 W/30299938-30299938 FN4137-S SNP G -> C AC=1;AN=170;BQB=0.671931;DP=2397;DP4=1310,1042,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.02721e-06;MQSB=0.897219;RPB=0.692824;SGB=34.878;VDB=0.649234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L474V|674|LOC_Os02g49570|protein_coding|CODING|LOC_Os02g49570.1|9|1) FN4001-S.SNP.2:30304496 chr02:030304496 0 W/30304496-30304496 FN4001-S SNP T -> A AC=1;AN=168;BQB=0.994233;DP=2483;DP4=1356,1032,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.60276e-05;MQSB=0.903249;RPB=0.971492;SGB=38.8805;VDB=0.741871;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T279|674|LOC_Os02g49570|protein_coding|CODING|LOC_Os02g49570.1|4|1) FN3851-S.SNP.2:30308369 chr02:030308369 0 W/30308369-30308369 FN3851-S SNP C -> A AC=2;AN=158;BQB=0.652997;DP=1626;DP4=1174,402,11,4;HOB=0.024996;ICB=0.493752;MQ=37;MQ0F=0;MQB=1.98499e-05;MQSB=0.0107153;RPB=0.372445;SGB=60.1755;VDB=0.769026;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.2:30326480 chr02:030326480 0 W/30326480-30326480 FN337-S Single Base Substitution A-G INTRON HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3802-S.SNP.2:30342182 chr02:030342182 0 W/30342182-30342182 FN3802-S SNP G -> A AC=1;AN=190;BQB=0.973828;DP=2587;DP4=1223,1265,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1407e-07;MQSB=0.9756;RPB=0.795795;SGB=49.0954;VDB=0.24747;EFF=INTRON(MODIFIER||||516|LOC_Os02g49650|protein_coding|CODING|LOC_Os02g49650.1|3|1) FN3511-S.SNP.2:30356643 chr02:030356643 0 W/30356643-30356643 FN3511-S SNP C -> A AC=2;AN=188;BQB=0.97643;DP=3078;DP4=1484,1519,8,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.96849e-10;MQSB=0.944624;RPB=0.976875;SGB=71.6954;VDB=0.767704;EFF=SPLICE_SITE_DONOR(HIGH||||469|LOC_Os02g49670|protein_coding|CODING|LOC_Os02g49670.1|2|1),INTRON(MODIFIER||||469|LOC_Os02g49670|protein_coding|CODING|LOC_Os02g49670.1|2|1);LOF=(LOC_Os02g49670|LOC_Os02g49670|1|1.00) W42-1-3S-1.SNP.2:30360195 chr02:030360195 0 W/30360195-30360195 W42-1-3S-1 Single Base Substitution G-C INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1048-S.SNP.2:30361514 chr02:030361514 0 W/30361514-30361514 FN1048-S Single Base Substitution T-A INTERGENIC HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3501-S.SNP.2:30365868 chr02:030365868 0 W/30365868-30365868 FN3501-S SNP A -> C AC=1;AN=188;BQB=0.990595;DP=2852;DP4=1288,1469,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.65449e-07;MQSB=0.747864;RPB=0.133622;SGB=53.5223;VDB=0.0401148;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.2:30368203 chr02:030368203 0 W/30368203-30368203 FN-243 Single Base Substitution C-A INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN874-S.SNP.2:30369138 chr02:030369138 0 W/30369138-30369138 FN874-S Single Base Substitution C-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN-148.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN-148 Single Base Substitution C-T INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-215.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN-215 Single Base Substitution C-T INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1281-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN1281-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1326-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN1326-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1508-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN1508-S Single Base Substitution C-T INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2203-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.963053;DP=3994;DP4=1407,2145,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000751127;MQB=5.11795e-09;MQSB=1.95433e-10;RPB=0.522154;SGB=36.4291;VDB=0.430842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN2474 SNP C -> T AC=1;AN=200;BQB=0.568901;DP=3932;DP4=1379,2103,12,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.94671e-15;MQSB=1.25497e-07;RPB=0.974356;SGB=-75.0485;VDB=0.972993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.947393;DP=2456;DP4=975,1286,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.69386e-06;MQSB=0.675596;RPB=0.138631;SGB=62.7569;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN452-S Single Base Substitution C-T INTERGENIC HOMO SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN495-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN495-S Single Base Substitution C-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN892-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN927-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN927-S Single Base Substitution C-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN953-S.SNP.2:30370446 chr02:030370446 0 W/30370446-30370446 FN953-S Single Base Substitution C-T INTERGENIC HOMO SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN874-S.SNP.2:30373141 chr02:030373141 0 W/30373141-30373141 FN874-S Single Base Substitution A-C INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN517-S.SNP.2:30374341 chr02:030374341 0 W/30374341-30374341 FN517-S Single Base Substitution C-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN1529-S.SNP.2:30379228 chr02:030379228 0 W/30379228-30379228 FN1529-S Single Base Substitution T-C INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN-133.SNP.2:30384095 chr02:030384095 0 W/30384095-30384095 FN-133 Single Base Substitution T-C INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN713-S.SNP.2:30385093 chr02:030385093 0 W/30385093-30385093 FN713-S Single Base Substitution G-T INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1042-S.SNP.2:30387239 chr02:030387239 0 W/30387239-30387239 FN1042-S Single Base Substitution G-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1042-S.SNP.2:30387240 chr02:030387240 0 W/30387240-30387240 FN1042-S Single Base Substitution C-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN373-S.SNP.2:30395391 chr02:030395391 0 W/30395391-30395391 FN373-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g49720 aldehyde dehydrogenase, putative, expressed SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1517-S.SNP.2:30403031 chr02:030403031 0 W/30403031-30403031 FN1517-S Single Base Substitution G-T INTRON HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2448.SNP.2:30403485 chr02:030403485 0 W/30403485-30403485 FN2448 SNP C -> T AC=2;AN=200;BQB=0.567342;DP=4543;DP4=1880,2148,18,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000220119;MQB=1.51894e-16;MQSB=2.9376e-09;RPB=0.298194;SGB=41.5933;VDB=0.698418;EFF=INTRON(MODIFIER||||402|LOC_Os02g49730|protein_coding|CODING|LOC_Os02g49730.1|1|1) FN3712-S.SNP.2:30405571 chr02:030405571 0 W/30405571-30405571 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.328893;DP=2750;DP4=1284,1308,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000549321;MQSB=0.851766;RPB=0.983911;SGB=28.9929;VDB=0.904869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.2:30406964 chr02:030406964 0 W/30406964-30406964 FN2492 SNP C -> T AC=1;AN=200;BQB=0.0814053;DP=3852;DP4=1868,1701,7,6;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0096054;MQB=0.208087;MQSB=2.88846e-07;RPB=0.769778;SGB=19.0642;VDB=0.72907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.2:30415172 chr02:030415172 0 W/30415172-30415172 FN2574-S SNP A -> G AC=1;AN=198;BQB=0.56677;DP=4326;DP4=2048,2082,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00138132;MQSB=0.988853;RPB=0.753546;SGB=11.1786;VDB=0.633776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3302-S.SNP.2:30419317 chr02:030419317 0 W/30419317-30419317 FN3302-S SNP C -> T AC=2;AN=184;BQB=0.70062;DP=3198;DP4=1484,1603,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.89754e-10;MQSB=0.639692;RPB=0.586567;SGB=40.9276;VDB=0.545448;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F55|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F55|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F54|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.3|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F54|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.4|2|1) FN3380-S.SNP.2:30421765 chr02:030421765 0 W/30421765-30421765 FN3380-S SNP C -> A AC=1;AN=184;BQB=0.958327;DP=2668;DP4=1312,1252,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.61856e-08;MQSB=0.995057;RPB=0.75756;SGB=32.2261;VDB=0.383964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A456E|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A456E|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A455E|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.3|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A455E|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.4|8|1) FN3380-S.SNP.2:30421766 chr02:030421766 0 W/30421766-30421766 FN3380-S SNP G -> C AC=1;AN=184;BQB=0.962484;DP=2675;DP4=1336,1254,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.09911e-09;MQSB=0.996619;RPB=0.461924;SGB=35.7479;VDB=0.0650136;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A456|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A456|771|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.2|9|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A455|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.3|9|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A455|770|LOC_Os02g49760|protein_coding|CODING|LOC_Os02g49760.4|8|1) FN1089-S.SNP.2:30423723 chr02:030423723 0 W/30423723-30423723 FN1089-S Single Base Substitution T-A INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN4039-S.SNP.2:30434444 chr02:030434444 0 W/30434444-30434444 FN4039-S SNP T -> A AC=1;AN=168;BQB=0.809004;DP=2667;DP4=1483,1101,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000374953;MQB=0.000101014;MQSB=0.995296;RPB=0.854807;SGB=27.8864;VDB=0.653865;EFF=INTERGENIC(MODIFIER||||||||||1) FN_826-4-1.SNP.2:30442271 chr02:030442271 0 W/30442271-30442271 FN_826-4-1 Single Base Substitution C-T HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN2092-S.SNP.2:30450153 chr02:030450153 0 W/30450153-30450153 FN2092-S SNP A -> T AC=1;AN=168;BQB=0.0453776;DP=3657;DP4=2049,1091,19,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.057227;MQSB=0.285545;RPB=0.25366;SGB=-98.0622;VDB=0.0679429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.2:30450153 chr02:030450153 0 W/30450153-30450153 FN2276-S SNP A -> T AC=1;AN=190;BQB=0.977529;DP=4537;DP4=2285,1597,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=4.62141e-06;MQSB=0.155582;RPB=0.279961;SGB=36.1006;VDB=0.278636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.2:30454474 chr02:030454474 0 W/30454474-30454474 FN3940-S SNP A -> T AC=1;AN=158;BQB=0.578803;DP=2239;DP4=1082,1048,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.26659e-05;MQSB=0.988527;RPB=0.9836;SGB=51.4366;VDB=0.462868;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.2:30468127 chr02:030468127 0 W/30468127-30468127 FN1549-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g49850 plastocyanin-like domain containing protein, putative, expressed SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN426-S.SNP.2:30469564 chr02:030469564 0 W/30469564-30469564 FN426-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g49860 AWPM-19-like membrane family protein, putative, expressed SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3576-S.SNP.2:30472796 chr02:030472796 0 W/30472796-30472796 FN3576-S SNP A -> G AC=2;AN=188;BQB=0.994954;DP=2893;DP4=1270,1441,20,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.41533e-24;MQSB=0.922784;RPB=0.359293;SGB=166.4;VDB=0.861712;EFF=SPLICE_SITE_REGION(LOW||||191|LOC_Os02g49870|protein_coding|CODING|LOC_Os02g49870.1|3|1),SPLICE_SITE_REGION(LOW||||159|LOC_Os02g49870|protein_coding|CODING|LOC_Os02g49870.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E171|191|LOC_Os02g49870|protein_coding|CODING|LOC_Os02g49870.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E139|159|LOC_Os02g49870|protein_coding|CODING|LOC_Os02g49870.2|4|1),UTR_3_PRIME(MODIFIER||1453||452|LOC_Os02g49880|protein_coding|CODING|LOC_Os02g49880.1|2|1) FN442-S.SNP.2:30475645 chr02:030475645 0 W/30475645-30475645 FN442-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1018-S.SNP.2:30482513 chr02:030482513 0 W/30482513-30482513 FN1018-S Single Base Substitution C-T STOP_GAINED HET LOC_Os02g49890 retrotransposon protein, putative, unclassified, expressed SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2596-S.SNP.2:30483287 chr02:030483287 0 W/30483287-30483287 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.848146;DP=3828;DP4=2024,1548,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05421e-07;MQSB=0.608833;RPB=0.873854;SGB=54.144;VDB=0.505181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A288T|679|LOC_Os02g49890|protein_coding|CODING|LOC_Os02g49890.1|4|1) FN1448-S.SNP.2:30484755 chr02:030484755 0 W/30484755-30484755 FN1448-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g49890 retrotransposon protein, putative, unclassified, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3310-S.SNP.2:30491525 chr02:030491525 0 W/30491525-30491525 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.998501;DP=2894;DP4=1260,1513,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00207325;MQB=5.75667e-08;MQSB=0.00598942;RPB=0.607895;SGB=53.2642;VDB=0.25876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.2:30495992 chr02:030495992 0 W/30495992-30495992 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.93742;DP=3839;DP4=2115,1422,29,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.07666e-24;MQSB=0.940157;RPB=0.0324645;SGB=144.408;VDB=0.0721119;EFF=INTRON(MODIFIER||||160|LOC_Os02g49910|protein_coding|CODING|LOC_Os02g49910.1|1|1) FN3693-S.SNP.2:30496321 chr02:030496321 0 W/30496321-30496321 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.834246;DP=3013;DP4=1502,1382,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.79137e-10;MQSB=0.593802;RPB=0.291672;SGB=31.3213;VDB=0.644475;EFF=INTRON(MODIFIER||||160|LOC_Os02g49910|protein_coding|CODING|LOC_Os02g49910.1|2|1) FN3364-S.SNP.2:30497438 chr02:030497438 0 W/30497438-30497438 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.580981;DP=2882;DP4=1358,1448,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.7613e-05;MQSB=0.99794;RPB=0.691136;SGB=35.1773;VDB=0.860992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.2:30499378 chr02:030499378 0 W/30499378-30499378 FN1606-S Single Base Substitution G-A INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN_798-4-2.SNP.2:30503079 chr02:030503079 0 W/30503079-30503079 FN_798-4-2 Single Base Substitution T-A HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN4260-S.SNP.2:30503967 chr02:030503967 0 W/30503967-30503967 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.999977;DP=2413;DP4=1030,1254,11,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.19162e-13;MQSB=0.971984;RPB=0.918104;SGB=69.3045;VDB=0.903215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.2:30508335 chr02:030508335 0 W/30508335-30508335 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.795081;DP=2489;DP4=1096,1158,30,153;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0771394;MQB=0;MQSB=2.3764e-37;RPB=6.62533e-06;SGB=-1524.94;VDB=0.00293659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.2:30510568 chr02:030510568 0 W/30510568-30510568 FN3529-S SNP G -> A AC=1;AN=188;BQB=0.932076;DP=2538;DP4=1391,1082,11,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.01581e-08;MQSB=0.9988;RPB=0.974282;SGB=48.979;VDB=0.554125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.2:30512726 chr02:030512726 0 W/30512726-30512726 FN3305-S SNP C -> T AC=1;AN=184;BQB=0.585366;DP=3210;DP4=1480,1619,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.56954e-08;MQSB=0.524209;RPB=0.811588;SGB=53.3568;VDB=0.708022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.2:30514806 chr02:030514806 0 W/30514806-30514806 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.933773;DP=4580;DP4=2089,2230,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.37751e-16;MQSB=0.75302;RPB=0.853891;SGB=123.342;VDB=0.858975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.2:30515285 chr02:030515285 0 W/30515285-30515285 FN2217-S SNP A -> G AC=1;AN=190;BQB=0.980715;DP=4913;DP4=2299,2125,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.90873e-05;MQSB=0.94291;RPB=0.911766;SGB=25.439;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.2:30516291 chr02:030516291 0 W/30516291-30516291 FN801-S Single Base Substitution G-A INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN4234-S.SNP.2:30539923 chr02:030539923 0 W/30539923-30539923 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.882668;DP=2832;DP4=1429,1243,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.62177e-08;MQSB=0.892003;RPB=0.0820832;SGB=-16.5469;VDB=0.118547;EFF=UTR_3_PRIME(MODIFIER||107||255|LOC_Os02g49986|protein_coding|CODING|LOC_Os02g49986.1|3|1) FN4024-S.SNP.2:30572806 chr02:030572806 0 W/30572806-30572806 FN4024-S SNP T -> G AC=2;AN=168;BQB=0.427097;DP=2985;DP4=1355,1452,16,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.41072e-16;MQSB=0.999969;RPB=0.890606;SGB=29.9454;VDB=0.763372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.2:30575573 chr02:030575573 0 W/30575573-30575573 FN2339 SNP G -> A AC=1;AN=192;BQB=0.614338;DP=5171;DP4=2343,2537,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.01602e-12;MQSB=0.70955;RPB=0.797842;SGB=19.8696;VDB=0.876694;EFF=INTRON(MODIFIER||||508|LOC_Os02g50040|protein_coding|CODING|LOC_Os02g50040.1|3|1) FN2614-S.SNP.2:30580985 chr02:030580985 0 W/30580985-30580985 FN2614-S SNP T -> C AC=1;AN=198;BQB=0.999984;DP=4190;DP4=1896,2028,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.3844e-09;MQSB=0.968111;RPB=0.195105;SGB=54.5295;VDB=0.116657;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.2:30581576 chr02:030581576 0 W/30581576-30581576 FN1337-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN591-S.SNP.2:30583210 chr02:030583210 0 W/30583210-30583210 FN591-S Single Base Substitution A-T INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2091-S.SNP.2:30584293 chr02:030584293 0 W/30584293-30584293 FN2091-S SNP C -> G AC=1;AN=168;BQB=0.992499;DP=3195;DP4=1833,1311,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8855e-15;MQSB=0.925835;RPB=0.844538;SGB=24.2221;VDB=0.791662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.2:30586619 chr02:030586619 0 W/30586619-30586619 FN2268-S SNP C -> A AC=1;AN=190;BQB=0.1393;DP=4842;DP4=2261,2235,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14583e-10;MQSB=0.351208;RPB=0.0463429;SGB=19.6499;VDB=0.294574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.2:30588927 chr02:030588927 0 W/30588927-30588927 FN2485 SNP C -> T AC=2;AN=200;BQB=0.283126;DP=4270;DP4=2086,1913,21,18;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.00468384;MQB=0.733561;MQSB=0;RPB=0.367977;SGB=173.999;VDB=0.2263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T259M|693|LOC_Os02g50090|protein_coding|CODING|LOC_Os02g50090.1|1|1) FN4132-S.SNP.2:30592449 chr02:030592449 0 W/30592449-30592449 FN4132-S SNP C -> G AC=1;AN=182;BQB=0.835867;DP=3080;DP4=1404,1603,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.116234;MQB=0.0113849;MQSB=1.6821e-07;RPB=0.999456;SGB=53.1331;VDB=0.536049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.2:30594249 chr02:030594249 0 W/30594249-30594249 FN1067-S Single Base Substitution A-C INTRON HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2390.SNP.2:30596419 chr02:030596419 0 W/30596419-30596419 FN2390 SNP T -> A AC=1;AN=200;BQB=0.151852;DP=4900;DP4=2205,2261,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.62539e-13;MQSB=0.965288;RPB=0.960892;SGB=47.7211;VDB=0.889302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.2:30597803 chr02:030597803 0 W/30597803-30597803 FN2125-S SNP G -> A AC=2;AN=168;BQB=0.967655;DP=3049;DP4=1577,1401,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.37506e-15;MQSB=0.954989;RPB=0.980962;SGB=61.0778;VDB=0.48427;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.2:30599381 chr02:030599381 0 W/30599381-30599381 FN489-S Single Base Substitution G-A INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1002-S.SNP.2:30601023 chr02:030601023 0 W/30601023-30601023 FN1002-S Single Base Substitution T-G INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN321-S.SNP.2:30601786 chr02:030601786 0 W/30601786-30601786 FN321-S Single Base Substitution G-A INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN4230-S.SNP.2:30604179 chr02:030604179 0 W/30604179-30604179 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.91878;DP=2424;DP4=1191,1164,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.73405e-08;MQSB=0.794811;RPB=0.992591;SGB=47.8722;VDB=0.765955;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.2:30611626 chr02:030611626 0 W/30611626-30611626 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3658-S.SNP.2:30611626 chr02:030611626 0 W/30611626-30611626 FN3658-S SNP C -> T AC=2;AN=190;BQB=0.666746;DP=1822;DP4=1090,625,6,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.05818e-06;MQSB=0.486032;RPB=0.806651;SGB=15.9981;VDB=0.883066;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.2:30611626 chr02:030611626 0 W/30611626-30611626 FN3783-S SNP C -> T AC=1;AN=190;BQB=0.800291;DP=2595;DP4=1514,964,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.20069e-08;MQSB=0.591374;RPB=0.492542;SGB=39.6545;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.2:30615415 chr02:030615415 0 W/30615415-30615415 FN767-S Single Base Substitution A-G INTERGENIC HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN1731-S.SNP.2:30616445 chr02:030616445 0 W/30616445-30616445 FN1731-S SNP C -> T AC=1;AN=188;BQB=0.343821;DP=1970;DP4=1101,769,36,22;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.100508;MQB=2.72871e-20;MQSB=0.912094;RPB=1.8586e-07;SGB=-746.758;VDB=2.58268e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.2:30621811 chr02:030621811 0 W/30621811-30621811 FN1724-S SNP T -> C AC=1;AN=188;BQB=0.0684394;DP=2483;DP4=1226,1218,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000243727;MQSB=0.998976;RPB=0.241697;SGB=-56.0757;VDB=0.0768016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.2:30621811 chr02:030621811 0 W/30621811-30621811 FN2750-S SNP T -> C AC=1;AN=200;BQB=0.988005;DP=4897;DP4=2164,2467,23,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30751e-19;MQSB=0.965324;RPB=0.938302;SGB=123.188;VDB=0.886184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.2:30621811 chr02:030621811 0 W/30621811-30621811 FN3522-S SNP T -> C AC=1;AN=188;BQB=0.965056;DP=2987;DP4=1445,1459,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.40254e-11;MQSB=0.996751;RPB=0.7423;SGB=38.7926;VDB=0.599264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.2:30621811 chr02:030621811 0 W/30621811-30621811 FN3918-S SNP T -> C AC=2;AN=158;BQB=0.55277;DP=2701;DP4=1267,1326,11,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.73836e-16;MQSB=0.981241;RPB=0.297986;SGB=66.4688;VDB=0.185044;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.2:30621811 chr02:030621811 0 W/30621811-30621811 FN404-S Single Base Substitution T-C INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3331-S.SNP.2:30621828 chr02:030621828 0 W/30621828-30621828 FN3331-S SNP C -> T AC=1;AN=184;BQB=0.373389;DP=3190;DP4=1362,1716,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.98871e-06;MQSB=0.983861;RPB=0.650261;SGB=20.7533;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.2:30621830 chr02:030621830 0 W/30621830-30621830 FN3331-S SNP A -> T AC=1;AN=184;BQB=0.618348;DP=3219;DP4=1345,1714,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85746e-05;MQSB=0.999999;RPB=0.999972;SGB=18.2315;VDB=0.796206;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.2:30628596 chr02:030628596 0 W/30628596-30628596 FN1237-S Single Base Substitution A-G INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3718-S.SNP.2:30630160 chr02:030630160 0 W/30630160-30630160 FN3718-S SNP G -> A AC=2;AN=190;BQB=0.875597;DP=2438;DP4=1261,1100,8,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.20845e-11;MQSB=0.995457;RPB=0.454102;SGB=53.8699;VDB=0.0766324;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.2:30630502 chr02:030630502 0 W/30630502-30630502 FN549-S Single Base Substitution G-A INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN747-S.SNP.2:30630972 chr02:030630972 0 W/30630972-30630972 FN747-S Single Base Substitution G-A INTERGENIC HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN1158-S.SNP.2:30635764 chr02:030635764 0 W/30635764-30635764 FN1158-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN620-S.SNP.2:30637734 chr02:030637734 0 W/30637734-30637734 FN620-S Single Base Substitution A-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2692-S.SNP.2:30640766 chr02:030640766 0 W/30640766-30640766 FN2692-S SNP T -> C AC=1;AN=200;BQB=0.868873;DP=4465;DP4=1949,2255,9,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=8.78495e-08;MQSB=0.110703;RPB=0.329755;SGB=68.0801;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.2:30647501 chr02:030647501 0 W/30647501-30647501 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.408423;DP=3564;DP4=1803,1729,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10318e-11;MQSB=0.504451;RPB=0.96662;SGB=69.0561;VDB=0.744887;EFF=INTRON(MODIFIER||||373|LOC_Os02g50174|protein_coding|CODING|LOC_Os02g50174.1|3|1) FN1553-S.SNP.2:30651489 chr02:030651489 0 W/30651489-30651489 FN1553-S Single Base Substitution A-T INTRON Homo SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN978-S.SNP.2:30652947 chr02:030652947 0 W/30652947-30652947 FN978-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g50174 caleosin related protein, putative, expressed SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1135-S.SNP.2:30653835 chr02:030653835 0 W/30653835-30653835 FN1135-S Single Base Substitution C-A INTRON HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN978-S.SNP.2:30654846 chr02:030654846 0 W/30654846-30654846 FN978-S Single Base Substitution A-T INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3796-S.SNP.2:30659157 chr02:030659157 0 W/30659157-30659157 FN3796-S SNP C -> T AC=2;AN=190;BQB=0.717503;DP=2998;DP4=1270,1508,15,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.38073e-14;MQSB=0.985651;RPB=0.54567;SGB=61.9679;VDB=0.615681;EFF=UTR_3_PRIME(MODIFIER||262||132|LOC_Os02g50210|protein_coding|CODING|LOC_Os02g50210.1|1|1) FN808-S.SNP.2:30660024 chr02:030660024 0 W/30660024-30660024 FN808-S Single Base Substitution A-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN2535-S.SNP.2:30660980 chr02:030660980 0 W/30660980-30660980 FN2535-S SNP C -> A AC=1;AN=198;BQB=0.955152;DP=3919;DP4=1783,1917,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.46499e-05;MQSB=0.840336;RPB=0.566348;SGB=22.1736;VDB=0.794121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.2:30665743 chr02:030665743 0 W/30665743-30665743 FN3064-S SNP A -> T AC=1;AN=184;BQB=0.908921;DP=2993;DP4=1375,1477,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46774e-06;MQSB=0.788205;RPB=0.928811;SGB=25.1826;VDB=0.829464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.2:30667147 chr02:030667147 0 W/30667147-30667147 FN2362 SNP T -> A AC=1;AN=192;BQB=0.824826;DP=5090;DP4=2433,2329,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.80308e-12;MQSB=0.855448;RPB=0.365876;SGB=46.8644;VDB=0.41996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.2:30667705 chr02:030667705 0 W/30667705-30667705 FN-268 Single Base Substitution G-A INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1536-S.SNP.2:30667831 chr02:030667831 0 W/30667831-30667831 FN1536-S Single Base Substitution G-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2439.SNP.2:30668929 chr02:030668929 0 W/30668929-30668929 FN2439 SNP A -> T AC=1;AN=200;BQB=0.955636;DP=4194;DP4=1846,1992,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000231673;MQSB=0.93483;RPB=0.348201;SGB=-3.35138;VDB=0.111988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3802-S.SNP.2:30682612 chr02:030682612 0 W/30682612-30682612 FN3802-S SNP T -> A AC=1;AN=190;BQB=0.546591;DP=2807;DP4=1279,1438,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.84693e-06;MQSB=0.954638;RPB=0.629901;SGB=15.9981;VDB=0.479045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.2:30684814 chr02:030684814 0 W/30684814-30684814 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2167-S.SNP.2:30688042 chr02:030688042 0 W/30688042-30688042 FN2167-S SNP T -> C AC=1;AN=168;BQB=0.237876;DP=2884;DP4=1479,1364,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.38639e-06;MQSB=0.888785;RPB=0.817224;SGB=45.0404;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.2:30690517 chr02:030690517 0 W/30690517-30690517 FN4201-S SNP G -> A AC=1;AN=170;BQB=0.99992;DP=1755;DP4=831,857,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0245014;MQB=0.99091;MQSB=2.10714e-09;RPB=0.216679;SGB=47.8722;VDB=0.0145736;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.2:30693973 chr02:030693973 0 W/30693973-30693973 W246-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1401-S.SNP.2:30694258 chr02:030694258 0 W/30694258-30694258 FN1401-S Single Base Substitution T-C INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. W278-3-1.SNP.2:30699367 chr02:030699367 0 W/30699367-30699367 W278-3-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g50280 pentatricopeptide, putative, expressed SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-195.SNP.2:30705972 chr02:030705972 0 W/30705972-30705972 FN-195 Single Base Substitution G-A INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3677-S.SNP.2:30717390 chr02:030717390 0 W/30717390-30717390 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.993481;DP=2723;DP4=1305,1294,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31207e-09;MQSB=0.789502;RPB=0.848979;SGB=58.2031;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.2:30722275 chr02:030722275 0 W/30722275-30722275 FN2689-S SNP T -> C AC=1;AN=200;BQB=0.968198;DP=4999;DP4=2113,2702,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020004;MQB=2.74257e-13;MQSB=0.521477;RPB=0.993788;SGB=17.5158;VDB=0.370368;EFF=INTRON(MODIFIER||||599|LOC_Os02g50320|protein_coding|CODING|LOC_Os02g50320.1|2|1),INTRON(MODIFIER||||600|LOC_Os02g50320|protein_coding|CODING|LOC_Os02g50320.2|2|1) FN4084-S.SNP.2:30730137 chr02:030730137 0 W/30730137-30730137 FN4084-S SNP A -> C AC=1;AN=182;BQB=0.907579;DP=2805;DP4=1328,1412,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.89907e-09;MQSB=0.842067;RPB=0.928509;SGB=75.6874;VDB=0.43039;EFF=INTRON(MODIFIER||||740|LOC_Os02g50330|protein_coding|CODING|LOC_Os02g50330.1|1|1) FN1281-S.SNP.2:30738604 chr02:030738604 0 W/30738604-30738604 FN1281-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN936-S.SNP.2:30743260 chr02:030743260 0 W/30743260-30743260 FN936-S Single Base Substitution T-A INTRON HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN568-S.SNP.2:30752272 chr02:030752272 0 W/30752272-30752272 FN568-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g50360 nicalin, putative, expressed SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4037-S.SNP.2:30772309 chr02:030772309 0 W/30772309-30772309 FN4037-S SNP A -> G AC=1;AN=168;BQB=0.973568;DP=1560;DP4=556,775,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44773e-09;MQSB=0.942072;RPB=0.1986;SGB=24.6155;VDB=0.561202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.2:30776353 chr02:030776353 0 W/30776353-30776353 FN3699-S SNP T -> C AC=1;AN=190;BQB=0.863414;DP=3320;DP4=1771,1402,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27121e-13;MQSB=0.553777;RPB=0.643099;SGB=18.096;VDB=0.756056;EFF=INTRON(MODIFIER||||93|LOC_Os02g50390|protein_coding|CODING|LOC_Os02g50390.1|1|1) FN2366.SNP.2:30776706 chr02:030776706 0 W/30776706-30776706 FN2366 SNP G -> T AC=2;AN=192;BQB=0.984368;DP=4847;DP4=2141,2379,30,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.93287e-26;MQSB=0.546939;RPB=0.942627;SGB=168.097;VDB=0.902826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.2:30782225 chr02:030782225 0 W/30782225-30782225 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.709814;DP=5040;DP4=2283,2494,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4477e-06;MQSB=0.871449;RPB=0.953768;SGB=29.4541;VDB=0.750607;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-S.SNP.2:30785368 chr02:030785368 0 W/30785368-30785368 FN1554-S Single Base Substitution C-T INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2142-S.SNP.2:30787516 chr02:030787516 0 W/30787516-30787516 FN2142-S SNP T -> C AC=1;AN=168;BQB=0.826067;DP=3507;DP4=1544,1928,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01813e-08;MQSB=0.914031;RPB=0.946742;SGB=17.3231;VDB=0.121089;EFF=INTRON(MODIFIER||||213|LOC_Os02g50410|protein_coding|CODING|LOC_Os02g50410.1|2|1) FN1400-S.SNP.2:30794328 chr02:030794328 0 W/30794328-30794328 FN1400-S Single Base Substitution A-G INTRON HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN3974-S.SNP.2:30804653 chr02:030804653 0 W/30804653-30804653 FN3974-S SNP A -> T AC=1;AN=168;BQB=0.655223;DP=2469;DP4=1204,1131,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.69254e-05;MQSB=0.96912;RPB=0.32967;SGB=12.4615;VDB=0.884455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.2:30804880 chr02:030804880 0 W/30804880-30804880 FN-366 Single Base Substitution G-A INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-348.SNP.2:30812931 chr02:030812931 0 W/30812931-30812931 FN-348 Single Base Substitution C-T INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-263.SNP.2:30812953 chr02:030812953 0 W/30812953-30812953 FN-263 Single Base Substitution G-A INTERGENIC HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3631-S.SNP.2:30814420 chr02:030814420 0 W/30814420-30814420 FN3631-S SNP C -> T AC=2;AN=190;BQB=0.565608;DP=2946;DP4=1317,1509,13,13;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00509165;MQB=2.50124e-08;MQSB=0.160904;RPB=0.983151;SGB=112.85;VDB=0.69558;EFF=UTR_3_PRIME(MODIFIER||254||122|LOC_Os02g50470|protein_coding|CODING|LOC_Os02g50470.1|2|1) FN1696-S.SNP.2:30815803 chr02:030815803 0 W/30815803-30815803 FN1696-S SNP C -> T AC=2;AN=188;BQB=0.629336;DP=3503;DP4=1600,1858,11,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.61097e-18;MQSB=0.994476;RPB=0.306717;SGB=-5.22045;VDB=0.629159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.2:30815804 chr02:030815804 0 W/30815804-30815804 FN1696-S SNP C -> T AC=2;AN=188;BQB=0.100552;DP=3497;DP4=1580,1868,12,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.85482e-16;MQSB=0.994551;RPB=0.77823;SGB=-86.6665;VDB=0.340089;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.2:30820066 chr02:030820066 0 W/30820066-30820066 FN1215-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1366-S.SNP.2:30821913 chr02:030821913 0 W/30821913-30821913 FN1366-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2659-S.SNP.2:30823133 chr02:030823133 0 W/30823133-30823133 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.985655;DP=4356;DP4=2252,1714,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15267e-13;MQSB=0.741974;RPB=0.411898;SGB=69.1109;VDB=0.315434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.2:30823134 chr02:030823134 0 W/30823134-30823134 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.999459;DP=4346;DP4=2168,1832,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.67699e-13;MQSB=0.877593;RPB=0.331767;SGB=91.1059;VDB=0.10976;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.2:30839433 chr02:030839433 0 W/30839433-30839433 FN625-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1317-S.SNP.2:30841211 chr02:030841211 0 W/30841211-30841211 FN1317-S Single Base Substitution G-A INTRON HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN_1017-1.SNP.2:30841930 chr02:030841930 0 W/30841930-30841930 FN_1017-1 Single Base Substitution G-A Homo LOC_Os02g50490 endoglucanase, putative, expressed SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-215.SNP.2:30845651 chr02:030845651 0 W/30845651-30845651 FN-215 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g50510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1647-S.SNP.2:30845726 chr02:030845726 0 W/30845726-30845726 FN1647-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g50510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2646-S.SNP.2:30848691 chr02:030848691 0 W/30848691-30848691 FN2646-S SNP G -> T AC=1;AN=200;BQB=0.995764;DP=4332;DP4=1922,2148,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87193e-08;MQSB=0.939296;RPB=0.417653;SGB=54.2646;VDB=0.273837;EFF=INTRON(MODIFIER||||1137|LOC_Os02g50510|protein_coding|CODING|LOC_Os02g50510.1|2|1) FN-121.SNP.2:30851755 chr02:030851755 0 W/30851755-30851755 FN-121 Single Base Substitution G-T INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN4136-S.SNP.2:30853313 chr02:030853313 0 W/30853313-30853313 FN4136-S SNP C -> A AC=1;AN=170;BQB=0.929284;DP=2245;DP4=969,1176,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00222717;MQB=4.93027e-05;MQSB=0.302684;RPB=0.948591;SGB=47.8722;VDB=0.71014;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A113|193|LOC_Os02g50520|protein_coding|CODING|LOC_Os02g50520.1|1|1) FN2739-S.SNP.2:30853872 chr02:030853872 0 W/30853872-30853872 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.84003;DP=4366;DP4=2024,2099,26,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000687128;MQB=1.17451e-23;MQSB=0.598375;RPB=0.494284;SGB=152.03;VDB=0.269021;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.2:30853872 chr02:030853872 0 W/30853872-30853872 FN944-S Single Base Substitution G-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1261-S.SNP.2:30855630 chr02:030855630 0 W/30855630-30855630 FN1261-S Single Base Substitution C-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3373-S.SNP.2:30856384 chr02:030856384 0 W/30856384-30856384 FN3373-S SNP T -> A AC=1;AN=184;BQB=0.95795;DP=2967;DP4=1460,1402,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000111437;MQSB=0.367721;RPB=0.995869;SGB=57.786;VDB=0.752013;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L344F|819|LOC_Os02g50530|protein_coding|CODING|LOC_Os02g50530.1|2|1) W464-2-1.SNP.2:30856444 chr02:030856444 0 W/30856444-30856444 W464-2-1 Single Base Substitution G-A INTRON HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN579-S.SNP.2:30858489 chr02:030858489 0 W/30858489-30858489 FN579-S Single Base Substitution C-T INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN858-S.SNP.2:30888146 chr02:030888146 0 W/30888146-30888146 FN858-S Single Base Substitution G-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2373.SNP.2:30891321 chr02:030891321 0 W/30891321-30891321 FN2373 SNP C -> G AC=1;AN=192;BQB=0.150892;DP=4955;DP4=2268,2355,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.18368e-16;MQSB=0.856282;RPB=0.702525;SGB=-42.2982;VDB=0.356457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G182R|188|LOC_Os02g50580|protein_coding|CODING|LOC_Os02g50580.1|2|1) FN3308-S.SNP.2:30897063 chr02:030897063 0 W/30897063-30897063 FN3308-S SNP T -> C AC=2;AN=184;BQB=0.997425;DP=2877;DP4=1441,1323,14,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.29668e-13;MQSB=0.99903;RPB=0.527454;SGB=70.9657;VDB=0.213936;EFF=INTRON(MODIFIER||||151|LOC_Os02g50590|protein_coding|CODING|LOC_Os02g50590.1|3|1) FN3912-S.SNP.2:30898376 chr02:030898376 0 W/30898376-30898376 FN3912-S SNP T -> A AC=1;AN=158;BQB=0.997318;DP=2485;DP4=1146,1256,2,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000249339;MQSB=0.989039;RPB=0.97262;SGB=17.2267;VDB=0.382733;EFF=INTRON(MODIFIER||||151|LOC_Os02g50590|protein_coding|CODING|LOC_Os02g50590.1|4|1) FN3723-S.SNP.2:30903765 chr02:030903765 0 W/30903765-30903765 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.714684;DP=2569;DP4=1217,1240,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.91004e-10;MQSB=0.652658;RPB=0.826987;SGB=85.5263;VDB=0.881453;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.2:30909987 chr02:030909987 0 W/30909987-30909987 FN2272-S SNP C -> A AC=1;AN=190;BQB=0.999892;DP=4978;DP4=2283,2371,24,22;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0050221;MQB=1.64228e-15;MQSB=0.621213;RPB=0.280041;SGB=102.83;VDB=0.0624068;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.2:30912658 chr02:030912658 0 W/30912658-30912658 FN1336-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1627-S.SNP.2:30918414 chr02:030918414 0 W/30918414-30918414 FN1627-S Single Base Substitution A-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN1686-S.SNP.2:30918847 chr02:030918847 0 W/30918847-30918847 FN1686-S SNP T -> C AC=2;AN=188;BQB=0.154127;DP=3469;DP4=1708,1703,19,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.94544e-20;MQSB=0.99074;RPB=0.861859;SGB=-140.488;VDB=0.752649;EFF=UTR_3_PRIME(MODIFIER||281||390|LOC_Os02g50620|protein_coding|CODING|LOC_Os02g50620.1|8|1) FN4311-S.SNP.2:30922840 chr02:030922840 0 W/30922840-30922840 FN4311-S SNP G -> T AC=1;AN=170;BQB=0.950944;DP=2791;DP4=1073,1562,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.37366e-07;MQSB=0.453226;RPB=0.817234;SGB=43.4296;VDB=0.456466;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A4D|390|LOC_Os02g50620|protein_coding|CODING|LOC_Os02g50620.1|1|1) FN2768-S.SNP.2:30923615 chr02:030923615 0 W/30923615-30923615 FN2768-S SNP C -> T AC=1;AN=198;BQB=0.82013;DP=4162;DP4=2055,1877,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.72424e-09;MQSB=0.984353;RPB=0.860271;SGB=54.5295;VDB=0.956114;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.2:30926017 chr02:030926017 0 W/30926017-30926017 W502-3-4 Single Base Substitution C-A INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. W502-3-4.SNP.2:30926018 chr02:030926018 0 W/30926018-30926018 W502-3-4 Single Base Substitution A-T INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1515-S.SNP.2:30926419 chr02:030926419 0 W/30926419-30926419 FN1515-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g50630 E2F family transcription factor protein, putative, expressed SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN4032-S.SNP.2:30928291 chr02:030928291 0 W/30928291-30928291 FN4032-S SNP G -> A AC=1;AN=168;BQB=0.998161;DP=2628;DP4=1137,1339,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.94349e-14;MQSB=0.56343;RPB=0.929819;SGB=96.481;VDB=0.458175;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.2:30928313 chr02:030928313 0 W/30928313-30928313 FN4032-S SNP G -> A AC=1;AN=168;BQB=0.995619;DP=2558;DP4=1137,1202,7,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.39943e-14;MQSB=0.214712;RPB=0.949857;SGB=41.6313;VDB=0.551637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.2:30929076 chr02:030929076 0 W/30929076-30929076 FN3748-S SNP A -> T AC=2;AN=190;BQB=0.253455;DP=2248;DP4=893,1106,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.72991e-10;MQSB=0.221666;RPB=0.658967;SGB=-9.34484;VDB=0.890598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:30937608 chr02:030937608 0 W/30937608-30937608 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.838204;DP=3772;DP4=1645,1812,21,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.92299e-20;MQSB=0.732456;RPB=0.947636;SGB=126.432;VDB=0.698793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:30937608 chr02:030937608 0 W/30937608-30937608 FN2572-S Single Base Substitution A-G INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN4147-S.SNP.2:30939500 chr02:030939500 0 W/30939500-30939500 FN4147-S SNP G -> C AC=1;AN=170;BQB=0.81383;DP=2345;DP4=1145,1141,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.49733e-07;MQSB=0.994104;RPB=0.963805;SGB=14.9986;VDB=0.792905;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.2:30940333 chr02:030940333 0 W/30940333-30940333 FN533-S Single Base Substitution C-T INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN1519-S.SNP.2:30941934 chr02:030941934 0 W/30941934-30941934 FN1519-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g50650 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1519-S.SNP.2:30941955 chr02:030941955 0 W/30941955-30941955 FN1519-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g50650 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3844-S.SNP.2:30945038 chr02:030945038 0 W/30945038-30945038 FN3844-S SNP T -> C AC=1;AN=190;BQB=0.987677;DP=2884;DP4=1373,1404,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00693481;MQB=1.59897e-05;MQSB=0.701273;RPB=0.966806;SGB=25.439;VDB=0.00501405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K470E|909|LOC_Os02g50660|protein_coding|CODING|LOC_Os02g50660.1|4|1) W385-6-8-4.SNP.2:30945712 chr02:030945712 0 W/30945712-30945712 W385-6-8-4 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g50660 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN740-S.SNP.2:30947607 chr02:030947607 0 W/30947607-30947607 FN740-S Single Base Substitution G-A INTRON HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3665-S.SNP.2:30949005 chr02:030949005 0 W/30949005-30949005 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.913826;DP=2901;DP4=1401,1272,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79622e-15;MQSB=0.995048;RPB=0.855848;SGB=140.173;VDB=0.459343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.2:30949176 chr02:030949176 0 W/30949176-30949176 FN1650-S Single Base Substitution C-T INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2531-S.SNP.2:30953152 chr02:030953152 0 W/30953152-30953152 FN2531-S SNP T -> G AC=1;AN=198;BQB=0.999851;DP=4487;DP4=2448,1766,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.20593e-13;MQSB=0.999975;RPB=0.999927;SGB=79.6954;VDB=0.289353;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.2:30955484 chr02:030955484 0 W/30955484-30955484 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.998272;DP=2946;DP4=1393,1474,17,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.76619e-16;MQSB=0.953729;RPB=0.779719;SGB=125.307;VDB=0.493995;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.2:30959473 chr02:030959473 0 W/30959473-30959473 FN4043-S SNP A -> G AC=2;AN=168;BQB=0.979628;DP=2614;DP4=1289,1185,19,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.18754e-28;MQSB=0.853207;RPB=0.409889;SGB=177.367;VDB=0.348098;EFF=INTRON(MODIFIER||||611|LOC_Os02g50680|protein_coding|CODING|LOC_Os02g50680.1|11|1) FN2266-S.SNP.2:30962433 chr02:030962433 0 W/30962433-30962433 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.989725;DP=4939;DP4=2568,2104,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83899e-08;MQSB=0.888923;RPB=0.999611;SGB=23.6597;VDB=0.698706;EFF=INTRON(MODIFIER||||611|LOC_Os02g50680|protein_coding|CODING|LOC_Os02g50680.1|6|1),INTRON(MODIFIER||||543|LOC_Os02g50680|protein_coding|CODING|LOC_Os02g50680.2|6|1),INTRON(MODIFIER||||539|LOC_Os02g50680|protein_coding|CODING|LOC_Os02g50680.3|6|1) FN2620-S.SNP.2:30976508 chr02:030976508 0 W/30976508-30976508 FN2620-S SNP G -> T AC=1;AN=198;BQB=0.745307;DP=3456;DP4=1624,1521,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00144676;MQB=2.81364e-13;MQSB=0.193446;RPB=0.835758;SGB=123.071;VDB=0.0719804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R41S|103|LOC_Os02g50720|protein_coding|CODING|LOC_Os02g50720.1|1|1) FN4038-S.SNP.2:30977498 chr02:030977498 0 W/30977498-30977498 FN4038-S SNP C -> T AC=1;AN=168;BQB=0.983121;DP=1786;DP4=986,667,13,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.40581e-07;MQSB=0.211106;RPB=0.915833;SGB=65.4653;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.2:30980440 chr02:030980440 0 W/30980440-30980440 FN2667-S SNP G -> C AC=1;AN=200;BQB=0.293538;DP=5372;DP4=2372,2544,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30305e-09;MQSB=0.666239;RPB=0.977242;SGB=34.6953;VDB=0.908886;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.2:30987837 chr02:030987837 0 W/30987837-30987837 FN558-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g50740 WD domain, G-beta repeat domain containing protein, expressed SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN_N1-213-1.SNP.2:30991025 chr02:030991025 0 W/30991025-30991025 FN_N1-213-1 Single Base Substitution G-A Homo LOC_Os02g50750 retrotransposon protein, putative, unclassified, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN4126-S.SNP.2:30997556 chr02:030997556 0 W/30997556-30997556 FN4126-S SNP G -> A AC=1;AN=182;BQB=0.995854;DP=2893;DP4=1473,1357,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.7878e-07;MQSB=0.999331;RPB=0.501512;SGB=44.1115;VDB=0.906218;EFF=UTR_3_PRIME(MODIFIER||144||220|LOC_Os02g50760|protein_coding|CODING|LOC_Os02g50760.3|7|1),INTRON(MODIFIER||||442|LOC_Os02g50760|protein_coding|CODING|LOC_Os02g50760.1|7|1),INTRON(MODIFIER||||442|LOC_Os02g50760|protein_coding|CODING|LOC_Os02g50760.2|7|1) FN1645-S.SNP.2:30998206 chr02:030998206 0 W/30998206-30998206 FN1645-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g50760 heat shock protein DnaJ, putative, expressed SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1431-S.SNP.2:31011395 chr02:031011395 0 W/31011395-31011395 FN1431-S Single Base Substitution T-G INTRON HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-380.SNP.2:31013136 chr02:031013136 0 W/31013136-31013136 FN-380 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g50790 nuclear-pore anchor, putative, expressed SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1300-S.SNP.2:31020086 chr02:031020086 0 W/31020086-31020086 FN1300-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2755-S.SNP.2:31025719 chr02:031025719 0 W/31025719-31025719 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.545534;DP=4100;DP4=1829,2070,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000243902;MQB=1.64736e-11;MQSB=0.0247032;RPB=0.164;SGB=81.8956;VDB=0.696084;EFF=INTRON(MODIFIER||||501|LOC_Os02g50799|protein_coding|CODING|LOC_Os02g50799.1|20|1) FN2705-S.SNP.2:31027536 chr02:031027536 0 W/31027536-31027536 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.386392;DP=4579;DP4=2250,2132,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06632e-05;MQSB=0.97491;RPB=0.445651;SGB=16.4591;VDB=0.453607;EFF=SPLICE_SITE_REGION(LOW||||501|LOC_Os02g50799|protein_coding|CODING|LOC_Os02g50799.1|15|1),UTR_3_PRIME(MODIFIER||966||501|LOC_Os02g50799|protein_coding|CODING|LOC_Os02g50799.1|15|1) FN1079-S.SNP.2:31035612 chr02:031035612 0 W/31035612-31035612 FN1079-S Single Base Substitution C-A INTERGENIC HOMO SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN2366.SNP.2:31036324 chr02:031036324 0 W/31036324-31036324 FN2366 SNP T -> A AC=2;AN=192;BQB=0.96345;DP=4901;DP4=2253,2361,20,20;HOB=0.0206163;ICB=0.494846;MQ=27;MQ0F=0.198327;MQB=0.97314;MQSB=0;RPB=0.692608;SGB=177.012;VDB=0.886834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D29E|100|LOC_Os02g50805|protein_coding|CODING|LOC_Os02g50805.1|2|1) FN534-S.SNP.2:31039577 chr02:031039577 0 W/31039577-31039577 FN534-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN2098-S.SNP.2:31039643 chr02:031039643 0 W/31039643-31039643 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.000874899;DP=3686;DP4=1744,1870,21,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.24238e-09;MQSB=0.668227;RPB=0.319251;SGB=-331.017;VDB=0.765848;EFF=UTR_3_PRIME(MODIFIER||166||166|LOC_Os02g50810|protein_coding|CODING|LOC_Os02g50810.2|2|1),INTRON(MODIFIER||||188|LOC_Os02g50810|protein_coding|CODING|LOC_Os02g50810.1|2|1) FN2602-S.SNP.2:31043616 chr02:031043616 0 W/31043616-31043616 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.0757205;DP=4155;DP4=2169,1729,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.56336e-08;MQSB=0.702316;RPB=0.844804;SGB=37.1297;VDB=0.475191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.2:31044923 chr02:031044923 0 W/31044923-31044923 FN2462 SNP C -> T AC=1;AN=200;BQB=0.995984;DP=3120;DP4=1303,1601,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.95924e-06;MQSB=0.240229;RPB=0.98092;SGB=22.2439;VDB=0.915158;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.2:31045989 chr02:031045989 0 W/31045989-31045989 FN544-S Single Base Substitution A-C INTERGENIC HOMO SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN3522-S.SNP.2:31047409 chr02:031047409 0 W/31047409-31047409 FN3522-S SNP C -> T AC=1;AN=188;BQB=0.986315;DP=2722;DP4=1314,1320,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.31471e-07;MQSB=0.999998;RPB=0.994038;SGB=39.8925;VDB=0.275189;EFF=INTRON(MODIFIER||||538|LOC_Os02g50820|protein_coding|CODING|LOC_Os02g50820.1|11|1) FN-124.SNP.2:31052290 chr02:031052290 0 W/31052290-31052290 FN-124 Single Base Substitution A-T INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN1668-S.SNP.2:31055631 chr02:031055631 0 W/31055631-31055631 FN1668-S SNP T -> A AC=2;AN=188;BQB=0.146381;DP=3969;DP4=1814,2111,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.77592e-14;MQSB=0.912558;RPB=0.883575;SGB=31.7742;VDB=0.820168;EFF=UTR_3_PRIME(MODIFIER||122||181|LOC_Os02g50830|protein_coding|CODING|LOC_Os02g50830.1|5|1) FN-394.SNP.2:31060365 chr02:031060365 0 W/31060365-31060365 FN-394 Single Base Substitution G-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2532-S.SNP.2:31073761 chr02:031073761 0 W/31073761-31073761 FN2532-S SNP G -> T AC=1;AN=198;BQB=0.585799;DP=4760;DP4=2077,2408,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.41473e-14;MQSB=0.944486;RPB=0.787236;SGB=90.9049;VDB=0.215023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.2:31073762 chr02:031073762 0 W/31073762-31073762 FN2532-S SNP C -> G AC=1;AN=198;BQB=0.682079;DP=4763;DP4=2116,2374,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.25677e-13;MQSB=0.944057;RPB=0.828369;SGB=86.3098;VDB=0.232344;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.2:31084943 chr02:031084943 0 W/31084943-31084943 FN631-S Single Base Substitution C-T INTRON HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2207-S.SNP.2:31087110 chr02:031087110 0 W/31087110-31087110 FN2207-S SNP A -> C AC=1;AN=190;BQB=0.669191;DP=4959;DP4=2419,2303,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201654;MQB=4.77796e-11;MQSB=0.719036;RPB=0.773996;SGB=76.4186;VDB=0.373678;EFF=INTRON(MODIFIER||||214|LOC_Os02g50860|protein_coding|CODING|LOC_Os02g50860.1|3|1) FN2768-S.SNP.2:31089493 chr02:031089493 0 W/31089493-31089493 FN2768-S SNP T -> A AC=1;AN=198;BQB=0.986758;DP=4300;DP4=2128,1963,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.2397e-15;MQSB=0.91686;RPB=0.331213;SGB=52.7004;VDB=0.285099;EFF=INTRON(MODIFIER||||120|LOC_Os02g50870|protein_coding|CODING|LOC_Os02g50870.1|2|1) FN633-S.SNP.2:31089883 chr02:031089883 0 W/31089883-31089883 FN633-S Single Base Substitution T-G INTRON HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1273-S.SNP.2:31095157 chr02:031095157 0 W/31095157-31095157 FN1273-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1701-S.SNP.2:31095157 chr02:031095157 0 W/31095157-31095157 FN1701-S SNP T -> A AC=1;AN=188;BQB=0.785762;DP=4113;DP4=1671,2388,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.91198e-05;MQSB=0.685843;RPB=0.726421;SGB=3.99491;VDB=0.332758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2158-S.SNP.2:31095157 chr02:031095157 0 W/31095157-31095157 FN2158-S SNP T -> A AC=2;AN=168;BQB=0.0161105;DP=4030;DP4=1690,2230,20,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.23548e-20;MQSB=0.695294;RPB=0.974558;SGB=49.9768;VDB=0.650543;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.2:31095157 chr02:031095157 0 W/31095157-31095157 FN4185-S SNP T -> A AC=2;AN=170;BQB=0.982833;DP=1964;DP4=1090,804,18,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.34681e-14;MQSB=0.971616;RPB=0.55603;SGB=79.6325;VDB=0.388752;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.2:31095157 chr02:031095157 0 W/31095157-31095157 FN753-S Single Base Substitution T-A INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN1427-S.SNP.2:31095692 chr02:031095692 0 W/31095692-31095692 FN1427-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2129-S.SNP.2:31101301 chr02:031101301 0 W/31101301-31101301 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.0769133;DP=3244;DP4=2034,1153,19,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.42755e-13;MQSB=0.295898;RPB=0.979002;SGB=-11.0644;VDB=0.216234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.2:31101302 chr02:031101302 0 W/31101302-31101302 FN2129-S SNP T -> G AC=1;AN=168;BQB=0.155813;DP=3244;DP4=2018,1152,21,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.84152e-13;MQSB=0.261345;RPB=0.747676;SGB=-79.0524;VDB=0.127003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.2:31103862 chr02:031103862 0 W/31103862-31103862 FN1610-S Single Base Substitution G-C INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3359-S.SNP.2:31109537 chr02:031109537 0 W/31109537-31109537 FN3359-S SNP C -> A AC=1;AN=184;BQB=0.98817;DP=3040;DP4=1642,1306,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36895e-08;MQSB=0.965273;RPB=0.909778;SGB=53.2642;VDB=0.740357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.2:31113455 chr02:031113455 0 W/31113455-31113455 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.954018;DP=2434;DP4=959,1405,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.5669e-05;MQSB=0.976206;RPB=0.534757;SGB=34.5445;VDB=0.754528;EFF=INTRON(MODIFIER||||336|LOC_Os02g50900|protein_coding|CODING|LOC_Os02g50900.1|6|1) FN4132-S.SNP.2:31125555 chr02:031125555 0 W/31125555-31125555 FN4132-S SNP A -> T AC=1;AN=182;BQB=0.808963;DP=2809;DP4=1270,1388,2,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.57406e-06;MQSB=0.993727;RPB=0.915518;SGB=32.1169;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.2:31132809 chr02:031132809 0 W/31132809-31132809 FN3866-S SNP A -> T AC=2;AN=158;BQB=1;DP=2425;DP4=1217,1098,6,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.38379e-10;MQSB=0.938428;RPB=0.961192;SGB=73.2838;VDB=0.224526;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.2:31132809 chr02:031132809 0 W/31132809-31132809 FN798-S Single Base Substitution A-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN4072-S.SNP.2:31154352 chr02:031154352 0 W/31154352-31154352 FN4072-S SNP T -> A AC=1;AN=182;BQB=0.995662;DP=3548;DP4=1750,1638,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.90409e-08;MQSB=0.904411;RPB=0.961625;SGB=57.644;VDB=0.235019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.2:31156076 chr02:031156076 0 W/31156076-31156076 FN-345 Single Base Substitution G-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1257-S.SNP.2:31168003 chr02:031168003 0 W/31168003-31168003 FN1257-S Single Base Substitution G-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1257-S.SNP.2:31168004 chr02:031168004 0 W/31168004-31168004 FN1257-S Single Base Substitution A-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3306-S.SNP.2:31170103 chr02:031170103 0 W/31170103-31170103 FN3306-S SNP C -> G AC=1;AN=184;BQB=0.973934;DP=2531;DP4=726,1674,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000395101;MQB=3.64402e-08;MQSB=0.263693;RPB=0.993772;SGB=49.835;VDB=0.561782;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.2:31171119 chr02:031171119 0 W/31171119-31171119 FN754-S Single Base Substitution A-G INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1353-S.SNP.2:31182767 chr02:031182767 0 W/31182767-31182767 FN1353-S Single Base Substitution T-A INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4255-S.SNP.2:31185429 chr02:031185429 0 W/31185429-31185429 FN4255-S SNP A -> C AC=1;AN=170;BQB=0.251121;DP=2559;DP4=1198,1238,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84736e-05;MQSB=0.885197;RPB=0.480981;SGB=2.88981;VDB=0.161376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K153Q|181|LOC_Os02g50980|protein_coding|CODING|LOC_Os02g50980.1|2|1) FN1697-S.SNP.2:31190242 chr02:031190242 0 W/31190242-31190242 FN1697-S SNP A -> C AC=1;AN=188;BQB=0.0148415;DP=3715;DP4=1713,1968,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.43108e-10;MQSB=0.997278;RPB=0.411067;SGB=-69.186;VDB=0.185042;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.2:31197018 chr02:031197018 0 W/31197018-31197018 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.970863;DP=4513;DP4=2215,2031,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88052e-06;MQSB=0.977669;RPB=0.483838;SGB=45.0543;VDB=0.504358;EFF=INTRON(MODIFIER||||357|LOC_Os02g51000|protein_coding|CODING|LOC_Os02g51000.1|1|1) FN4187-S.SNP.2:31201004 chr02:031201004 0 W/31201004-31201004 FN4187-S SNP T -> G AC=1;AN=170;BQB=0.948907;DP=2494;DP4=1225,1193,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.4554e-05;MQSB=0.701567;RPB=0.999724;SGB=38.987;VDB=0.448353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.2:31208867 chr02:031208867 0 W/31208867-31208867 FN2690-S SNP C -> T AC=2;AN=200;BQB=0.926373;DP=5096;DP4=2483,2320,18,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.63113e-17;MQSB=0.978774;RPB=0.980571;SGB=68.5625;VDB=0.326362;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.2:31219078 chr02:031219078 0 W/31219078-31219078 FN669-S Single Base Substitution A-G INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN797-S.SNP.2:31219136 chr02:031219136 0 W/31219136-31219136 FN797-S Single Base Substitution T-C INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3888-S.SNP.2:31221717 chr02:031221717 0 W/31221717-31221717 FN3888-S SNP C -> A AC=1;AN=158;BQB=0.569047;DP=2544;DP4=1086,1337,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.28033e-09;MQSB=0.935981;RPB=0.826085;SGB=57.6596;VDB=0.218338;EFF=UTR_3_PRIME(MODIFIER||6||291|LOC_Os02g51040|protein_coding|CODING|LOC_Os02g51040.1|3|1) FN1410-S.SNP.2:31223254 chr02:031223254 0 W/31223254-31223254 FN1410-S Single Base Substitution T-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2652-S.SNP.2:31223349 chr02:031223349 0 W/31223349-31223349 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.715202;DP=5005;DP4=2204,2464,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.52056e-12;MQSB=0.860176;RPB=0.704379;SGB=32.0901;VDB=0.795823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.2:31226574 chr02:031226574 0 W/31226574-31226574 FN1076-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g51050 Leucine rich repeat N-terminal domain containing protein, putative, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN969-S.SNP.2:31234032 chr02:031234032 0 W/31234032-31234032 FN969-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN3916-S.SNP.2:31241509 chr02:031241509 0 W/31241509-31241509 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.877464;DP=1743;DP4=807,860,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.697e-05;MQSB=0.136647;RPB=0.553561;SGB=42.6978;VDB=0.912116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.2:31242429 chr02:031242429 0 W/31242429-31242429 FN1256-S Single Base Substitution C-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2489.SNP.2:31243834 chr02:031243834 0 W/31243834-31243834 FN2489 SNP G -> A AC=1;AN=200;BQB=0.997995;DP=4426;DP4=2210,1913,11,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00474469;MQB=4.89041e-05;MQSB=0.304157;RPB=0.873261;SGB=34.6953;VDB=0.303354;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.2:31247619 chr02:031247619 0 W/31247619-31247619 FN2417 SNP C -> G AC=1;AN=200;BQB=0.89492;DP=4578;DP4=1909,2386,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47103e-16;MQSB=0.993188;RPB=0.997472;SGB=137.158;VDB=0.558324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D217E|463|LOC_Os02g51080|protein_coding|CODING|LOC_Os02g51080.1|2|1) FN2321.SNP.2:31248725 chr02:031248725 0 W/31248725-31248725 FN2321 SNP A -> G AC=1;AN=192;BQB=0.176038;DP=4785;DP4=2200,2319,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.83827e-14;MQSB=0.99063;RPB=0.199661;SGB=86.1165;VDB=0.0476993;EFF=UTR_3_PRIME(MODIFIER||280||463|LOC_Os02g51080|protein_coding|CODING|LOC_Os02g51080.1|3|1) FN2378.SNP.2:31262796 chr02:031262796 0 W/31262796-31262796 FN2378 SNP G -> T AC=2;AN=192;BQB=0.977414;DP=4992;DP4=2698,1869,34,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.29287e-35;MQSB=0.999485;RPB=0.986584;SGB=239.384;VDB=0.682435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.2:31272021 chr02:031272021 0 W/31272021-31272021 FN2291 SNP C -> T AC=1;AN=192;BQB=0.928875;DP=5199;DP4=2461,2429,21,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000192345;MQB=5.2933e-22;MQSB=0.889271;RPB=0.798583;SGB=125.324;VDB=0.459049;EFF=INTERGENIC(MODIFIER||||||||||1) FN697-S.SNP.2:31275011 chr02:031275011 0 W/31275011-31275011 FN697-S Single Base Substitution G-A INTRON HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN3844-S.SNP.2:31282029 chr02:031282029 0 W/31282029-31282029 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.973778;DP=2137;DP4=1009,1071,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.63745e-08;MQSB=0.94884;RPB=0.921712;SGB=49.0954;VDB=0.835187;EFF=UTR_5_PRIME(MODIFIER||8363||71|LOC_Os02g51119|protein_coding|CODING|LOC_Os02g51119.2|3|1),UTR_3_PRIME(MODIFIER||869||77|LOC_Os02g51119|protein_coding|CODING|LOC_Os02g51119.1|3|1) FN3844-S.SNP.2:31282030 chr02:031282030 0 W/31282030-31282030 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.977194;DP=2135;DP4=1008,1072,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06116e-07;MQSB=0.948051;RPB=0.970351;SGB=44.5415;VDB=0.916508;EFF=UTR_5_PRIME(MODIFIER||8364||71|LOC_Os02g51119|protein_coding|CODING|LOC_Os02g51119.2|3|1),UTR_3_PRIME(MODIFIER||868||77|LOC_Os02g51119|protein_coding|CODING|LOC_Os02g51119.1|3|1) FN2781-S.SNP.2:31284625 chr02:031284625 0 W/31284625-31284625 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.22233;DP=3915;DP4=1818,1946,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70307e-05;MQSB=0.960676;RPB=0.0995371;SGB=16.3688;VDB=0.200231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.2:31285001 chr02:031285001 0 W/31285001-31285001 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.992065;DP=4684;DP4=2411,2175,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.46084e-10;MQSB=0.813217;RPB=0.839102;SGB=80.782;VDB=0.745159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A69V|493|LOC_Os02g51130|protein_coding|CODING|LOC_Os02g51130.1|1|1) FN4314-S.SNP.2:31285544 chr02:031285544 0 W/31285544-31285544 FN4314-S SNP G -> C AC=1;AN=170;BQB=1;DP=3183;DP4=1668,1396,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.81835e-10;MQSB=0.988383;RPB=0.362439;SGB=70.0854;VDB=0.457261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R250P|493|LOC_Os02g51130|protein_coding|CODING|LOC_Os02g51130.1|1|1) FN3373-S.SNP.2:31293070 chr02:031293070 0 W/31293070-31293070 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.833267;DP=3240;DP4=1680,1476,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79269e-09;MQSB=0.996925;RPB=0.781328;SGB=25.7969;VDB=0.957613;EFF=INTRON(MODIFIER||||488|LOC_Os02g51140|protein_coding|CODING|LOC_Os02g51140.1|2|1),INTRON(MODIFIER||||207|LOC_Os02g51140|protein_coding|CODING|LOC_Os02g51140.2|2|1) FN568-S.SNP.2:31295901 chr02:031295901 0 W/31295901-31295901 FN568-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os02g51140 N-rich protein, putative, expressed SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3628-S.SNP.2:31302275 chr02:031302275 0 W/31302275-31302275 FN3628-S SNP A -> T AC=1;AN=190;BQB=0.895464;DP=2738;DP4=1214,1381,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.16948e-07;MQSB=0.999871;RPB=0.741173;SGB=15.9981;VDB=0.967159;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.2:31302578 chr02:031302578 0 W/31302578-31302578 FN851-S Single Base Substitution T-A INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN851-S.SNP.2:31302581 chr02:031302581 0 W/31302581-31302581 FN851-S Single Base Substitution G-T INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3426-S.SNP.2:31303276 chr02:031303276 0 W/31303276-31303276 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.419423;DP=3450;DP4=1758,1463,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.86486e-06;MQSB=0.717045;RPB=0.706719;SGB=42.7914;VDB=0.696205;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.2:31306241 chr02:031306241 0 W/31306241-31306241 FN727-S Single Base Substitution G-A INTRON HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN924-S.SNP.2:31310634 chr02:031310634 0 W/31310634-31310634 FN924-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2089-S.SNP.2:31315082 chr02:031315082 0 W/31315082-31315082 FN2089-S SNP G -> A AC=1;AN=168;BQB=0.832246;DP=2944;DP4=1986,926,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18783e-05;MQSB=0.650576;RPB=0.982219;SGB=24.4556;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.2:31322144 chr02:031322144 0 W/31322144-31322144 FN950-S Single Base Substitution T-A INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2696-S.SNP.2:31325573 chr02:031325573 0 W/31325573-31325573 FN2696-S SNP C -> T AC=2;AN=200;BQB=0.974177;DP=4113;DP4=2113,1747,14,6;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000486263;MQB=1.73638e-05;MQSB=0.579233;RPB=0.978019;SGB=86.5007;VDB=0.796931;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.2:31328247 chr02:031328247 0 W/31328247-31328247 FN404-S Single Base Substitution C-T SYNONYMOUS_STOP HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN2560-S.SNP.2:31335712 chr02:031335712 0 W/31335712-31335712 FN2560-S SNP G -> A AC=2;AN=198;BQB=0.696882;DP=3570;DP4=1821,1493,11,4;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00336134;MQB=5.36393e-07;MQSB=0.405195;RPB=0.330734;SGB=43.7442;VDB=0.100656;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.2:31356494 chr02:031356494 0 W/31356494-31356494 FN-407 Single Base Substitution C-T INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.2:31356494 chr02:031356494 0 W/31356494-31356494 FN407-S Single Base Substitution C-T INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2395.SNP.2:31357952 chr02:031357952 0 W/31357952-31357952 FN2395 SNP A -> T AC=1;AN=200;BQB=0.230353;DP=3262;DP4=1220,1299,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000247246;MQSB=0.66698;RPB=0.910678;SGB=-34.9207;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.2:31359046 chr02:031359046 0 W/31359046-31359046 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.46871;DP=3919;DP4=1914,1771,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00255167;MQB=2.80208e-05;MQSB=0.991747;RPB=0.999445;SGB=32.9588;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.2:31367588 chr02:031367588 0 W/31367588-31367588 FN-247 Single Base Substitution G-A INTERGENIC HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2545-S.SNP.2:31372390 chr02:031372390 0 W/31372390-31372390 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.963677;DP=4324;DP4=1960,2104,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00231267;MQB=1.50339e-08;MQSB=0.0889908;RPB=0.943867;SGB=34.5346;VDB=0.26159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.2:31377612 chr02:031377612 0 W/31377612-31377612 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.996593;DP=3079;DP4=1445,1517,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0685287;MQB=0.926645;MQSB=0.452049;RPB=0.32848;SGB=39.2697;VDB=0.114577;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN-157 Single Base Substitution G-A INTERGENIC HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN1109-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN1109-S Single Base Substitution G-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1205-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN1205-S Single Base Substitution G-A INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1350-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN1350-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN2266-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.134924;DP=3731;DP4=1307,1950,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0158135;MQB=0.347113;MQSB=0;RPB=0.9936;SGB=-3.65821;VDB=0.961991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN2383 SNP G -> A AC=1;AN=192;BQB=0.0812068;DP=3822;DP4=1385,1894,3,13;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0159602;MQB=0.43197;MQSB=0;RPB=0.977216;SGB=-55.8869;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.0962839;DP=3378;DP4=1179,1732,11,19;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0204263;MQB=9.03893e-05;MQSB=0;RPB=0.744924;SGB=-6.09922;VDB=0.507822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.2:31384295 chr02:031384295 0 W/31384295-31384295 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.778465;DP=2320;DP4=1083,1159,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0116379;MQB=0.0193107;MQSB=4.10389e-21;RPB=0.935867;SGB=25.3545;VDB=0.187503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.2:31390685 chr02:031390685 0 W/31390685-31390685 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.972541;DP=2545;DP4=957,1496,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000227108;MQSB=0.978083;RPB=0.746738;SGB=29.5899;VDB=0.0339506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.2:31396910 chr02:031396910 0 W/31396910-31396910 FN2622-S SNP C -> T AC=1;AN=200;BQB=0.899837;DP=4249;DP4=2222,1812,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.37487e-11;MQSB=0.823266;RPB=0.777157;SGB=72.7161;VDB=0.092099;EFF=UTR_5_PRIME(MODIFIER||453||410|LOC_Os02g51280|protein_coding|CODING|LOC_Os02g51280.1|1|1) FN3883-S.SNP.2:31397539 chr02:031397539 0 W/31397539-31397539 FN3883-S SNP G -> T AC=1;AN=158;BQB=0.981697;DP=2493;DP4=1109,1284,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.21651e-09;MQSB=0.973575;RPB=0.619979;SGB=64.5449;VDB=0.754445;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G59|410|LOC_Os02g51280|protein_coding|CODING|LOC_Os02g51280.1|1|1) FN2113-S.SNP.2:31404529 chr02:031404529 0 W/31404529-31404529 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.436964;DP=4111;DP4=1664,2380,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.67574e-13;MQSB=0.970841;RPB=0.316103;SGB=-44.0584;VDB=0.00070439;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.2:31414933 chr02:031414933 0 W/31414933-31414933 FN-289 Single Base Substitution T-G INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN2115-S.SNP.2:31418367 chr02:031418367 0 W/31418367-31418367 FN2115-S SNP G -> A AC=2;AN=168;BQB=5.30073e-06;DP=3494;DP4=1805,1606,22,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.75839e-17;MQSB=0.771233;RPB=0.918011;SGB=-159.723;VDB=0.347452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.2:31418643 chr02:031418643 0 W/31418643-31418643 FN1499-S Single Base Substitution T-C INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2598-S.SNP.2:31422121 chr02:031422121 0 W/31422121-31422121 FN2598-S SNP C -> T AC=1;AN=198;BQB=0.965088;DP=4804;DP4=2496,2032,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00020816;MQB=2.41157e-07;MQSB=0.996519;RPB=0.127623;SGB=-15.026;VDB=0.220923;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.2:31434521 chr02:031434521 0 W/31434521-31434521 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.673532;DP=2660;DP4=1300,1293,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.58505e-10;MQSB=0.979998;RPB=0.982723;SGB=78.9707;VDB=0.818984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D213V|782|LOC_Os02g51330|protein_coding|CODING|LOC_Os02g51330.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D210V|779|LOC_Os02g51330|protein_coding|CODING|LOC_Os02g51330.2|4|1) FN-334.SNP.2:31453516 chr02:031453516 0 W/31453516-31453516 FN-334 Single Base Substitution C-A INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-334.SNP.2:31453517 chr02:031453517 0 W/31453517-31453517 FN-334 Single Base Substitution C-A INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1135-S.SNP.2:31455036 chr02:031455036 0 W/31455036-31455036 FN1135-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3902-S.SNP.2:31459376 chr02:031459376 0 W/31459376-31459376 FN3902-S SNP G -> A AC=1;AN=158;BQB=0.952;DP=1932;DP4=676,1191,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.83122e-06;MQSB=0.603979;RPB=0.461012;SGB=33.9591;VDB=0.246704;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.2:31475340 chr02:031475340 0 W/31475340-31475340 FN-187 Single Base Substitution G-A INTRON HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN_1017-1.SNP.2:31475413 chr02:031475413 0 W/31475413-31475413 FN_1017-1 Single Base Substitution C-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2531-S.SNP.2:31476248 chr02:031476248 0 W/31476248-31476248 FN2531-S SNP A -> T AC=1;AN=198;BQB=0.721654;DP=4053;DP4=2012,1803,22,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.55222e-17;MQSB=0.831687;RPB=0.980405;SGB=65.676;VDB=0.77084;EFF=INTRON(MODIFIER||||975|LOC_Os02g51400|protein_coding|CODING|LOC_Os02g51400.1|8|1) FN1426-S.SNP.2:31478739 chr02:031478739 0 W/31478739-31478739 FN1426-S Single Base Substitution T-A INTRON HOMO SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN-131.SNP.2:31485102 chr02:031485102 0 W/31485102-31485102 FN-131 Single Base Substitution A-T INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2440.SNP.2:31485965 chr02:031485965 0 W/31485965-31485965 FN2440 SNP T -> C AC=1;AN=200;BQB=0.5031;DP=5130;DP4=2466,2439,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02973e-06;MQSB=0.961548;RPB=0.831469;SGB=49.6594;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.2:31486104 chr02:031486104 0 W/31486104-31486104 FN-131 Single Base Substitution G-A INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN_552-1-1.SNP.2:31489602 chr02:031489602 0 W/31489602-31489602 FN_552-1-1 Single Base Substitution G-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN968-S.SNP.2:31493568 chr02:031493568 0 W/31493568-31493568 FN968-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3362-S.SNP.2:31498553 chr02:031498553 0 W/31498553-31498553 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.990651;DP=3057;DP4=1725,1246,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22427e-08;MQSB=0.985582;RPB=0.95755;SGB=62.3078;VDB=0.369045;EFF=INTRON(MODIFIER||||116|LOC_Os02g51420|protein_coding|CODING|LOC_Os02g51420.1|1|1) FN2313.SNP.2:31524656 chr02:031524656 0 W/31524656-31524656 FN2313 SNP G -> A AC=1;AN=192;BQB=0.936821;DP=5121;DP4=2492,2322,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.18896e-09;MQSB=0.997178;RPB=0.85866;SGB=58.3392;VDB=0.723817;EFF=UTR_3_PRIME(MODIFIER||10||382|LOC_Os02g51460|protein_coding|CODING|LOC_Os02g51460.1|1|1) FN2313.SNP.2:31524657 chr02:031524657 0 W/31524657-31524657 FN2313 SNP C -> A AC=1;AN=192;BQB=0.997838;DP=5119;DP4=2495,2331,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95778e-09;MQSB=0.938065;RPB=0.80176;SGB=21.2209;VDB=0.681875;EFF=UTR_3_PRIME(MODIFIER||11||382|LOC_Os02g51460|protein_coding|CODING|LOC_Os02g51460.1|1|1) FN4314-S.SNP.2:31525235 chr02:031525235 0 W/31525235-31525235 FN4314-S SNP C -> T AC=1;AN=170;BQB=0.999158;DP=2672;DP4=1229,1378,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.61396e-10;MQSB=0.988785;RPB=0.707528;SGB=61.2001;VDB=0.248028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.2:31525582 chr02:031525582 0 W/31525582-31525582 FN3991-S SNP A -> T AC=1;AN=168;BQB=0.150499;DP=2437;DP4=964,1362,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62726e-05;MQSB=0.916361;RPB=0.859399;SGB=-36.0898;VDB=0.641714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.2:31525583 chr02:031525583 0 W/31525583-31525583 FN3991-S SNP A -> T AC=1;AN=168;BQB=0.6922;DP=2436;DP4=931,1340,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.22706e-08;MQSB=0.936806;RPB=0.372959;SGB=1.32907;VDB=0.137055;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.2:31526467 chr02:031526467 0 W/31526467-31526467 FN4208-S SNP T -> A AC=1;AN=170;BQB=0.992789;DP=1990;DP4=957,947,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000502513;MQB=4.98038e-07;MQSB=0.893386;RPB=0.999982;SGB=27.9928;VDB=0.684373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.2:31527534 chr02:031527534 0 W/31527534-31527534 FN-85 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g51470 ATP synthase F1, delta subunit family protein, putative, expressed SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. 701-2.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-2 Single Base Substitution A-G INTERGENIC HET SNo: 1436, Mutant_ID: 701-2, Generation: M2, Mutations: 21, Genes: 34, Seed availability: Yes. 701-3.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-3 Single Base Substitution A-G INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-3 Single Base Substitution A-G INTERGENIC Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-4.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-4 Single Base Substitution A-G INTERGENIC Homo SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. 701-5.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-5 Single Base Substitution A-G INTERGENIC Homo SNo: 1439, Mutant_ID: 701-5, Generation: M2, Mutations: 18, Genes: 7, Seed availability: Yes. 701-8.SNP.2:31545435 chr02:031545435 0 W/31545435-31545435 701-8 Single Base Substitution A-G INTERGENIC HET SNo: 1442, Mutant_ID: 701-8, Generation: M2, Mutations: 20, Genes: 7, Seed availability: Yes. FN3808-S.SNP.2:31545512 chr02:031545512 0 W/31545512-31545512 FN3808-S SNP C -> T AC=1;AN=190;BQB=0.964717;DP=2581;DP4=1255,1203,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000364035;MQSB=0.00018722;RPB=0.0168163;SGB=26.3271;VDB=0.0126037;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.2:31546527 chr02:031546527 0 W/31546527-31546527 FN-219 Single Base Substitution C-A INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. W470-2-1.SNP.2:31547149 chr02:031547149 0 W/31547149-31547149 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. W470-2-1.SNP.2:31547225 chr02:031547225 0 W/31547225-31547225 W470-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2542-S.SNP.2:31547664 chr02:031547664 0 W/31547664-31547664 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.992901;DP=4022;DP4=1834,2010,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000248633;MQB=7.49361e-10;MQSB=0.379205;RPB=0.86886;SGB=86.3098;VDB=0.987857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.2:31549410 chr02:031549410 0 W/31549410-31549410 FN2460 SNP C -> T AC=1;AN=200;BQB=0.396834;DP=4672;DP4=2108,2294,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.07342e-10;MQSB=0.746924;RPB=0.198254;SGB=29.4849;VDB=0.562573;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.2:31549660 chr02:031549660 0 W/31549660-31549660 W591-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1106-S.SNP.2:31556392 chr02:031556392 0 W/31556392-31556392 FN1106-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2440.SNP.2:31559558 chr02:031559558 0 W/31559558-31559558 FN2440 SNP C -> T AC=2;AN=200;BQB=0.82336;DP=4634;DP4=2000,2300,20,20;HOB=0.0198;ICB=0.495051;MQ=27;MQ0F=0.106819;MQB=0.969295;MQSB=0;RPB=0.99893;SGB=178.604;VDB=0.827231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G960E|1044|LOC_Os02g51530|protein_coding|CODING|LOC_Os02g51530.1|2|1) FN4184-S.SNP.2:31561147 chr02:031561147 0 W/31561147-31561147 FN4184-S SNP A -> G AC=1;AN=170;BQB=0.9038;DP=2378;DP4=965,1328,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0117746;MQB=0.640833;MQSB=1.72147e-12;RPB=0.714325;SGB=43.4296;VDB=0.360212;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D430|1044|LOC_Os02g51530|protein_coding|CODING|LOC_Os02g51530.1|2|1) FN2192-S.SNP.2:31563083 chr02:031563083 0 W/31563083-31563083 FN2192-S SNP G -> A AC=2;AN=190;BQB=0.056494;DP=3829;DP4=1318,2194,18,23;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0778271;MQB=0.782222;MQSB=6.32184e-18;RPB=0.280502;SGB=90.0605;VDB=0.897332;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.2:31564165 chr02:031564165 0 W/31564165-31564165 FN1744-S SNP G -> A AC=1;AN=188;BQB=0.992875;DP=2233;DP4=1378,798,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.175549;MQB=0.980154;MQSB=0;RPB=0.996548;SGB=15.903;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.2:31564496 chr02:031564496 0 W/31564496-31564496 FN3993-S SNP A -> T AC=1;AN=168;BQB=0.677279;DP=2645;DP4=1019,1473,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20936e-08;MQSB=0.794753;RPB=0.660218;SGB=41.6096;VDB=0.0738925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.2:31567550 chr02:031567550 0 W/31567550-31567550 FN2433 SNP G -> A AC=2;AN=200;BQB=0.700688;DP=5265;DP4=2639,2311,33,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.7034e-31;MQSB=0.998757;RPB=0.964593;SGB=115.456;VDB=0.836322;EFF=INTRON(MODIFIER||||520|LOC_Os02g51540|protein_coding|CODING|LOC_Os02g51540.1|3|1) FN496-S.SNP.2:31575422 chr02:031575422 0 W/31575422-31575422 FN496-S Single Base Substitution C-T INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1412-S.SNP.2:31577900 chr02:031577900 0 W/31577900-31577900 FN1412-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2468.SNP.2:31586253 chr02:031586253 0 W/31586253-31586253 FN2468 SNP C -> G AC=1;AN=200;BQB=0.907927;DP=5215;DP4=2026,2924,5,7;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.150719;MQB=0.533756;MQSB=1.37704e-06;RPB=0.446526;SGB=-0.141083;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.2:31588219 chr02:031588219 0 W/31588219-31588219 FN972-S Single Base Substitution C-T INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN3419-S.SNP.2:31590181 chr02:031590181 0 W/31590181-31590181 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.843159;DP=2828;DP4=1357,1371,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00282885;MQB=0.130108;MQSB=6.11149e-13;RPB=0.812267;SGB=44.2207;VDB=0.241135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.2:31593262 chr02:031593262 0 W/31593262-31593262 FN3976-S SNP C -> A AC=2;AN=168;BQB=0.643162;DP=2892;DP4=1370,1383,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.36753e-22;MQSB=0.908257;RPB=0.780268;SGB=154.082;VDB=0.343227;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.2:31593263 chr02:031593263 0 W/31593263-31593263 FN3976-S SNP A -> G AC=2;AN=168;BQB=0.987001;DP=2893;DP4=1368,1392,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.39747e-21;MQSB=0.90465;RPB=0.733661;SGB=154.082;VDB=0.466138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.2:31600065 chr02:031600065 0 W/31600065-31600065 FN2169-S SNP G -> A AC=1;AN=168;BQB=0.234583;DP=4057;DP4=2048,1966,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.3532e-11;MQSB=0.995753;RPB=0.564176;SGB=-238.038;VDB=0.243279;EFF=INTRON(MODIFIER||||332|LOC_Os02g51590|protein_coding|CODING|LOC_Os02g51590.1|7|1) FN2352.SNP.2:31601466 chr02:031601466 0 W/31601466-31601466 FN2352 SNP T -> C AC=1;AN=192;BQB=0.305106;DP=4770;DP4=2204,2115,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.67039e-13;MQSB=0.269811;RPB=0.579503;SGB=-145.104;VDB=0.254033;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F19S|566|LOC_Os02g51600|protein_coding|CODING|LOC_Os02g51600.1|1|1) FN-171.SNP.2:31610069 chr02:031610069 0 W/31610069-31610069 FN-171 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN569-S.SNP.2:31615303 chr02:031615303 0 W/31615303-31615303 FN569-S Single Base Substitution G-A INTERGENIC HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN230-S.SNP.2:31616971 chr02:031616971 0 W/31616971-31616971 FN230-S Single Base Substitution T-A INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN883-S.SNP.2:31627856 chr02:031627856 0 W/31627856-31627856 FN883-S Single Base Substitution A-G INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2388.SNP.2:31632779 chr02:031632779 0 W/31632779-31632779 FN2388 SNP T -> C AC=1;AN=200;BQB=0.469457;DP=3330;DP4=1349,1133,19,22;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0573574;MQB=0.33959;MQSB=1.45206e-15;RPB=0.373328;SGB=-142.243;VDB=0.332391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.2:31644893 chr02:031644893 0 W/31644893-31644893 FN1029-S Single Base Substitution A-G INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1121-S.SNP.2:31657726 chr02:031657726 0 W/31657726-31657726 FN1121-S Single Base Substitution A-C INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3323-S.SNP.2:31662280 chr02:031662280 0 W/31662280-31662280 FN3323-S SNP A -> T AC=1;AN=184;BQB=0.880621;DP=3016;DP4=1597,1304,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.57976e-06;MQSB=0.968319;RPB=0.982346;SGB=35.1773;VDB=0.470577;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.2:31677847 chr02:031677847 0 W/31677847-31677847 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.466709;DP=3747;DP4=1737,1957,17,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40841e-10;MQSB=0.900332;RPB=0.999672;SGB=-12.3568;VDB=0.655208;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.2:31677859 chr02:031677859 0 W/31677859-31677859 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.0184348;DP=3787;DP4=1739,1996,23,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.01415e-07;MQSB=0.948403;RPB=0.174078;SGB=-285.602;VDB=0.440245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.2:31686103 chr02:031686103 0 W/31686103-31686103 FN2322 SNP C -> A AC=2;AN=192;BQB=0.692977;DP=5088;DP4=2395,2373,18,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.9544e-17;MQSB=0.999958;RPB=0.963923;SGB=67.3792;VDB=0.541621;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.2:31686969 chr02:031686969 0 W/31686969-31686969 FN-306 Single Base Substitution C-T INTRON HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-306.SNP.2:31686970 chr02:031686970 0 W/31686970-31686970 FN-306 Single Base Substitution T-A INTRON HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN978-S.SNP.2:31696381 chr02:031696381 0 W/31696381-31696381 FN978-S Single Base Substitution C-A INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2629-S.SNP.2:31701825 chr02:031701825 0 W/31701825-31701825 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.980009;DP=5072;DP4=2263,2516,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66212e-16;MQSB=0.999999;RPB=0.710087;SGB=58.1418;VDB=0.276962;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.2:31702300 chr02:031702300 0 W/31702300-31702300 FN1060-S Single Base Substitution G-A INTERGENIC HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3798-S.SNP.2:31703353 chr02:031703353 0 W/31703353-31703353 FN3798-S SNP G -> C AC=2;AN=190;BQB=0.972888;DP=3375;DP4=1666,1526,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.59841e-13;MQSB=0.784181;RPB=0.732037;SGB=99.1879;VDB=0.168614;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.2:31706652 chr02:031706652 0 W/31706652-31706652 FN1476-S Single Base Substitution C-T INTRON Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1261-S.SNP.2:31715232 chr02:031715232 0 W/31715232-31715232 FN1261-S Single Base Substitution G-C INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3667-S.SNP.2:31717231 chr02:031717231 0 W/31717231-31717231 FN3667-S SNP A -> T AC=1;AN=190;BQB=0.75306;DP=2811;DP4=1499,1243,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.63486e-06;MQSB=0.992401;RPB=0.940884;SGB=32.5467;VDB=0.532754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.2:31719340 chr02:031719340 0 W/31719340-31719340 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.885102;DP=3748;DP4=1381,2195,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.32166e-08;MQSB=0.925218;RPB=0.944067;SGB=15.903;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.2:31730956 chr02:031730956 0 W/31730956-31730956 FN4134-S SNP C -> T AC=1;AN=182;BQB=0.980345;DP=3004;DP4=1411,1517,14,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.21805e-14;MQSB=0.845443;RPB=0.862827;SGB=70.7363;VDB=0.532293;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.2:31738866 chr02:031738866 0 W/31738866-31738866 FN3105-S SNP T -> A AC=1;AN=184;BQB=0.974267;DP=2656;DP4=1310,1263,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36015e-06;MQSB=0.26911;RPB=0.960482;SGB=48.7425;VDB=0.938725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.2:31752058 chr02:031752058 0 W/31752058-31752058 FN1057-S Single Base Substitution G-T INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1057-S.SNP.2:31752061 chr02:031752061 0 W/31752061-31752061 FN1057-S Single Base Substitution T-G INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3366-S.SNP.2:31756351 chr02:031756351 0 W/31756351-31756351 FN3366-S SNP C -> G AC=1;AN=184;BQB=0.957314;DP=3226;DP4=1600,1501,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93619e-13;MQSB=0.986871;RPB=0.832285;SGB=38.4058;VDB=0.479346;EFF=INTRON(MODIFIER||||161|LOC_Os02g51840|protein_coding|CODING|LOC_Os02g51840.1|2|1),INTRON(MODIFIER||||223|LOC_Os02g51840|protein_coding|CODING|LOC_Os02g51840.3|2|1),INTRON(MODIFIER||||108|LOC_Os02g51840|protein_coding|CODING|LOC_Os02g51840.2|2|1) FN810-S.SNP.2:31768319 chr02:031768319 0 W/31768319-31768319 FN810-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os02g51860 dehydration response related protein, putative, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3433-S.SNP.2:31775798 chr02:031775798 0 W/31775798-31775798 FN3433-S SNP C -> A AC=1;AN=184;BQB=0.756446;DP=4114;DP4=2078,1944,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000157071;MQSB=0.832949;RPB=0.370711;SGB=39.699;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A164S|849|LOC_Os02g51880|protein_coding|CODING|LOC_Os02g51880.1|1|1) FN2235-S.SNP.2:31780095 chr02:031780095 0 W/31780095-31780095 FN2235-S SNP T -> A AC=2;AN=190;BQB=0.714657;DP=4881;DP4=2385,2080,22,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204876;MQB=1.70361e-25;MQSB=0.970217;RPB=0.349446;SGB=115.599;VDB=0.70512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.2:31782774 chr02:031782774 0 W/31782774-31782774 FN2638-S SNP G -> A AC=2;AN=200;BQB=0.709352;DP=5260;DP4=2258,2734,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.41907e-23;MQSB=0.99843;RPB=0.998132;SGB=187.814;VDB=0.601998;EFF=INTRON(MODIFIER||||319|LOC_Os02g51890|protein_coding|CODING|LOC_Os02g51890.1|2|1),INTRON(MODIFIER||||176|LOC_Os02g51890|protein_coding|CODING|LOC_Os02g51890.2|2|1) FN2573-S.SNP.2:31782781 chr02:031782781 0 W/31782781-31782781 FN2573-S SNP G -> C AC=2;AN=198;BQB=0.887552;DP=4404;DP4=1842,2311,10,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.7366e-16;MQSB=0.937758;RPB=0.993668;SGB=86.8856;VDB=0.0125978;EFF=INTRON(MODIFIER||||319|LOC_Os02g51890|protein_coding|CODING|LOC_Os02g51890.1|2|1),INTRON(MODIFIER||||176|LOC_Os02g51890|protein_coding|CODING|LOC_Os02g51890.2|2|1) FN1531-S.SNP.2:31782805 chr02:031782805 0 W/31782805-31782805 FN1531-S Single Base Substitution C-A INTRON HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN3492-S.SNP.2:31798638 chr02:031798638 0 W/31798638-31798638 FN3492-S SNP C -> A AC=1;AN=184;BQB=0.537977;DP=2768;DP4=1693,939,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00650289;MQB=0.0064637;MQSB=2.45126e-05;RPB=0.99853;SGB=-16.8012;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.2:31798640 chr02:031798640 0 W/31798640-31798640 FN3492-S SNP A -> G AC=1;AN=184;BQB=0.255314;DP=2775;DP4=1688,838,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00540541;MQB=0.0276805;MQSB=4.53116e-07;RPB=0.234065;SGB=-16.8012;VDB=0.114294;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.2:31801981 chr02:031801981 0 W/31801981-31801981 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.684176;DP=2465;DP4=777,1593,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.89013e-07;MQSB=0.837753;RPB=0.277957;SGB=48.6486;VDB=0.455669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.2:31805352 chr02:031805352 0 W/31805352-31805352 FN1079-S Single Base Substitution G-A INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3729-S.SNP.2:31811175 chr02:031811175 0 W/31811175-31811175 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.897515;DP=2276;DP4=1086,1094,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8871e-09;MQSB=0.321065;RPB=0.995037;SGB=53.8699;VDB=0.632406;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.2:31819948 chr02:031819948 0 W/31819948-31819948 FN1203-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g51960 transposon protein, putative, unclassified, expressed SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN2388.SNP.2:31827686 chr02:031827686 0 W/31827686-31827686 FN2388 SNP G -> A AC=1;AN=200;BQB=0.87784;DP=5238;DP4=2528,2369,16,14;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.147575;MQB=0.789348;MQSB=0;RPB=0.335341;SGB=63.3521;VDB=0.566194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G425D|1152|LOC_Os02g51980|protein_coding|CODING|LOC_Os02g51980.1|1|1) FN2715-S.SNP.2:31827691 chr02:031827691 0 W/31827691-31827691 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.9562;DP=5353;DP4=2623,2437,11,13;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.164767;MQB=0.975281;MQSB=0;RPB=0.866454;SGB=104.921;VDB=0.197286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V427M|1152|LOC_Os02g51980|protein_coding|CODING|LOC_Os02g51980.1|1|1) FN1719-S.SNP.2:31832167 chr02:031832167 0 W/31832167-31832167 FN1719-S SNP A -> G AC=1;AN=188;BQB=0.581696;DP=2724;DP4=1311,1388,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38258e-05;MQSB=0.982666;RPB=0.146601;SGB=10.8165;VDB=0.194572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.2:31837521 chr02:031837521 0 W/31837521-31837521 FN2767-S SNP A -> G AC=1;AN=198;BQB=0.504836;DP=4145;DP4=1977,1944,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.2453e-16;MQSB=0.906306;RPB=0.964166;SGB=50.1053;VDB=0.0419689;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.2:31840754 chr02:031840754 0 W/31840754-31840754 FN1675-S SNP G -> A AC=2;AN=188;BQB=0.112517;DP=2549;DP4=820,1670,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.55082e-12;MQSB=0.992576;RPB=0.278097;SGB=22.5144;VDB=0.779414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P314L|328|LOC_Os02g52010|protein_coding|CODING|LOC_Os02g52010.1|1|1) FN1265-S.SNP.2:31842719 chr02:031842719 0 W/31842719-31842719 FN1265-S Single Base Substitution C-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3818-S.SNP.2:31852231 chr02:031852231 0 W/31852231-31852231 FN3818-S SNP C -> G AC=1;AN=190;BQB=0.933021;DP=3423;DP4=1718,1582,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.96951e-13;MQSB=0.997486;RPB=0.932672;SGB=117.403;VDB=0.746973;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T236S|311|LOC_Os02g52040|protein_coding|CODING|LOC_Os02g52040.1|1|1) FN3326-S.SNP.2:31853953 chr02:031853953 0 W/31853953-31853953 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.828401;DP=2912;DP4=1297,1505,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00274725;MQB=4.44513e-06;MQSB=0.931135;RPB=0.843293;SGB=53.2642;VDB=0.997766;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.2:31866531 chr02:031866531 0 W/31866531-31866531 FN898-S Single Base Substitution A-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2713-S.SNP.2:31867863 chr02:031867863 0 W/31867863-31867863 FN2713-S SNP G -> T AC=1;AN=200;BQB=0.396483;DP=4315;DP4=2068,2037,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00115875;MQB=3.35382e-10;MQSB=0.982447;RPB=0.432327;SGB=54.6902;VDB=0.65903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.2:31870714 chr02:031870714 0 W/31870714-31870714 FN3932-S SNP C -> T AC=2;AN=158;BQB=0.994679;DP=1771;DP4=1128,579,9,3;HOB=0.024996;ICB=0.493752;MQ=44;MQ0F=0.00846979;MQB=0.0664602;MQSB=0.0291233;RPB=0.957417;SGB=47.0672;VDB=0.361025;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L388|789|LOC_Os02g52070|protein_coding|CODING|LOC_Os02g52070.1|2|1) FN3430-S.SNP.2:31870932 chr02:031870932 0 W/31870932-31870932 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.790961;DP=3200;DP4=1749,1330,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00375;MQB=6.42707e-08;MQSB=0.910546;RPB=0.9996;SGB=75.8731;VDB=0.356192;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D460|789|LOC_Os02g52070|protein_coding|CODING|LOC_Os02g52070.1|2|1) FN2183-S.SNP.2:31871352 chr02:031871352 0 W/31871352-31871352 FN2183-S SNP G -> A AC=2;AN=190;BQB=0.808178;DP=3401;DP4=1539,1567,37,40;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000588062;MQB=5.16683e-26;MQSB=0.00199039;RPB=0.998052;SGB=296.508;VDB=0.642682;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L600|789|LOC_Os02g52070|protein_coding|CODING|LOC_Os02g52070.1|2|1) FN2441.SNP.2:31874470 chr02:031874470 0 W/31874470-31874470 FN2441 SNP G -> C AC=1;AN=200;BQB=0.866035;DP=2399;DP4=1038,1072,6,10;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.086286;MQB=0.378151;MQSB=6.61452e-21;RPB=0.815998;SGB=47.4799;VDB=0.427218;EFF=INTRON(MODIFIER||||580|LOC_Os02g52080|protein_coding|CODING|LOC_Os02g52080.1|1|1) FN2788-S.SNP.2:31878449 chr02:031878449 0 W/31878449-31878449 FN2788-S SNP A -> G AC=1;AN=198;BQB=0.906273;DP=3459;DP4=1528,1658,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0332466;MQB=0.849407;MQSB=8.93854e-19;RPB=0.830794;SGB=26.7492;VDB=0.82696;EFF=INTRON(MODIFIER||||1478|LOC_Os02g52090|protein_coding|CODING|LOC_Os02g52090.1|5|1) FN3515-S.SNP.2:31884767 chr02:031884767 0 W/31884767-31884767 FN3515-S SNP A -> T AC=2;AN=188;BQB=0.681822;DP=2531;DP4=929,1508,9,13;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.00513631;MQB=0.999508;MQSB=0.857262;RPB=0.239442;SGB=67.8739;VDB=0.593899;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.2:31885969 chr02:031885969 0 W/31885969-31885969 FN809-S Single Base Substitution C-A INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3707-S.SNP.2:31886673 chr02:031886673 0 W/31886673-31886673 FN3707-S SNP C -> G AC=1;AN=190;BQB=0.86466;DP=2384;DP4=1315,994,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000419463;MQB=1.17495e-06;MQSB=0.39354;RPB=0.994637;SGB=53.6492;VDB=0.660865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A183G|1987|LOC_Os02g52100|protein_coding|CODING|LOC_Os02g52100.1|1|1) FN871-S.SNP.2:31888459 chr02:031888459 0 W/31888459-31888459 FN871-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2364.SNP.2:31891522 chr02:031891522 0 W/31891522-31891522 FN2364 SNP G -> A AC=1;AN=192;BQB=0.10779;DP=5142;DP4=2237,2539,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0264489;MQB=0.253227;MQSB=0.916042;RPB=0.984088;SGB=5.79046;VDB=0.372154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1742I|1987|LOC_Os02g52100|protein_coding|CODING|LOC_Os02g52100.1|3|1) FN3452-S.SNP.2:31894012 chr02:031894012 0 W/31894012-31894012 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.987971;DP=3476;DP4=1856,1561,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.000575374;MQB=0.00127133;MQSB=0.0671171;RPB=0.905641;SGB=89.4385;VDB=0.0588022;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I594|967|LOC_Os02g52110|protein_coding|CODING|LOC_Os02g52110.1|3|1) FN1472-S.SNP.2:31895947 chr02:031895947 0 W/31895947-31895947 FN1472-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g52110 retrotransposon protein, putative, unclassified, expressed SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2194-S.SNP.2:31899364 chr02:031899364 0 W/31899364-31899364 FN2194-S SNP C -> A AC=1;AN=190;BQB=0.789638;DP=2750;DP4=951,1596,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00117899;MQSB=0.21371;RPB=0.36687;SGB=21.7749;VDB=0.394382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.2:31900357 chr02:031900357 0 W/31900357-31900357 FN1264-S Single Base Substitution C-T INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN-325.SNP.2:31911123 chr02:031911123 0 W/31911123-31911123 FN-325 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g52130 OsFBX61 - F-box domain containing protein, expressed SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN-325.SNP.2:31911129 chr02:031911129 0 W/31911129-31911129 FN-325 Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2331.SNP.2:31913091 chr02:031913091 0 W/31913091-31913091 FN2331 SNP G -> A AC=2;AN=192;BQB=0.577341;DP=4966;DP4=2319,2361,22,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.84111e-18;MQSB=0.95755;RPB=0.151677;SGB=80.2009;VDB=0.821691;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.2:31914272 chr02:031914272 0 W/31914272-31914272 FN976-S Single Base Substitution G-T INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1109-S.SNP.2:31915813 chr02:031915813 0 W/31915813-31915813 FN1109-S Single Base Substitution T-C INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN414-S.SNP.2:31919040 chr02:031919040 0 W/31919040-31919040 FN414-S Single Base Substitution A-T INTRON HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2461.SNP.2:31930692 chr02:031930692 0 W/31930692-31930692 FN2461 SNP C -> A AC=1;AN=200;BQB=0.989613;DP=4472;DP4=2014,2182,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41921e-14;MQSB=0.91582;RPB=0.128261;SGB=94.3471;VDB=0.283116;EFF=UTR_3_PRIME(MODIFIER||232||734|LOC_Os02g52160|protein_coding|CODING|LOC_Os02g52160.1|14|1) FN1324-S.SNP.2:31933692 chr02:031933692 0 W/31933692-31933692 FN1324-S Single Base Substitution G-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2703-S.SNP.2:31938888 chr02:031938888 0 W/31938888-31938888 FN2703-S SNP G -> A AC=2;AN=200;BQB=0.0457281;DP=4442;DP4=2317,1842,16,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.82777e-14;MQSB=0.742846;RPB=0.103263;SGB=90.7419;VDB=0.398328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.2:31942326 chr02:031942326 0 W/31942326-31942326 FN1314-S Single Base Substitution C-T INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN701-S.SNP.2:31949815 chr02:031949815 0 W/31949815-31949815 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. W481-5-1.SNP.2:31958673 chr02:031958673 0 W/31958673-31958673 W481-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1250-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN1250-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1757-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN1757-S SNP G -> A AC=2;AN=188;BQB=0.953815;DP=2277;DP4=1303,918,13,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.73407e-13;MQSB=0.985034;RPB=0.989886;SGB=64.3306;VDB=0.281035;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN2122-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.789299;DP=2457;DP4=1351,1042,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68855e-09;MQSB=0.95963;RPB=0.838686;SGB=34.3388;VDB=0.957049;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN2237-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN2237-S SNP G -> A AC=2;AN=190;BQB=0.717074;DP=4181;DP4=2138,1784,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.39549e-14;MQSB=0.00489491;RPB=0.999658;SGB=92.9626;VDB=0.768769;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN2334.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN2334 SNP G -> A AC=2;AN=192;BQB=0.48136;DP=4517;DP4=2278,1993,19,10;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.64551e-14;MQSB=0.150845;RPB=0.491439;SGB=59.6861;VDB=0.89012;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN3394-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.829637;DP=2969;DP4=1444,1433,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.10444e-06;MQSB=0.880502;RPB=0.9484;SGB=28.7043;VDB=0.28694;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN3930-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN3930-S SNP G -> A AC=2;AN=158;BQB=0.609566;DP=2298;DP4=1116,1093,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.59243e-11;MQSB=0.850884;RPB=0.863551;SGB=108.239;VDB=0.725444;EFF=UTR_5_PRIME(MODIFIER||255||334|LOC_Os02g52190|protein_coding|CODING|LOC_Os02g52190.1|1|1) FN536-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN536-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN727-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.2:31961111 chr02:031961111 0 W/31961111-31961111 FN867-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2340.SNP.2:31963877 chr02:031963877 0 W/31963877-31963877 FN2340 SNP G -> A AC=1;AN=192;BQB=0.645295;DP=5191;DP4=2389,2495,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13164e-07;MQSB=0.749084;RPB=0.807451;SGB=16.0922;VDB=0.0838289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:31964091 chr02:031964091 0 W/31964091-31964091 FN2572-S SNP T -> G AC=1;AN=198;BQB=0.443733;DP=4074;DP4=1874,1817,18,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.36271e-19;MQSB=0.833621;RPB=0.487636;SGB=-1.93338;VDB=0.108854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.2:31969642 chr02:031969642 0 W/31969642-31969642 FN1330-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2667-S.SNP.2:31974692 chr02:031974692 0 W/31974692-31974692 FN2667-S SNP C -> T AC=1;AN=200;BQB=0.998895;DP=4835;DP4=2244,2140,6,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00041365;MQB=4.08162e-08;MQSB=0.16347;RPB=0.349942;SGB=-14.3206;VDB=0.332651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.2:31974734 chr02:031974734 0 W/31974734-31974734 FN1625-S Single Base Substitution T-A INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.2:31974734 chr02:031974734 0 W/31974734-31974734 FN1626-S SNP T -> A AC=1;AN=188;BQB=0.773383;DP=4243;DP4=2130,2045,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0815461;MQB=0.00207208;MQSB=0.0144652;RPB=0.540603;SGB=30.2309;VDB=0.369566;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.2:31978552 chr02:031978552 0 W/31978552-31978552 FN4140-S SNP G -> T AC=2;AN=170;BQB=0.670386;DP=2051;DP4=768,1210,14,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.2541e-13;MQSB=0.925253;RPB=0.945948;SGB=76.1898;VDB=0.837113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.2:31985048 chr02:031985048 0 W/31985048-31985048 FN3411-S SNP T -> A AC=1;AN=184;BQB=0.961791;DP=2521;DP4=1255,1188,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.83477e-06;MQSB=0.967035;RPB=0.999418;SGB=44.2207;VDB=0.749333;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.2:31985560 chr02:031985560 0 W/31985560-31985560 FN-334 Single Base Substitution G-A INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN933-S.SNP.2:31991862 chr02:031991862 0 W/31991862-31991862 FN933-S Single Base Substitution T-C INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3448-S.SNP.2:31998688 chr02:031998688 0 W/31998688-31998688 FN3448-S SNP G -> C AC=1;AN=184;BQB=0.916682;DP=2802;DP4=1301,1368,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0682e-07;MQSB=0.891125;RPB=0.812724;SGB=32.2261;VDB=0.0313385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1411-S.SNP.2:32000977 chr02:032000977 0 W/32000977-32000977 FN1411-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN4072-S.SNP.2:32003629 chr02:032003629 0 W/32003629-32003629 FN4072-S SNP A -> G AC=1;AN=182;BQB=0.839876;DP=3378;DP4=1995,1257,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.36646e-07;MQSB=0.954435;RPB=0.882463;SGB=15.6115;VDB=0.763885;EFF=INTRON(MODIFIER||||132|LOC_Os02g52270|protein_coding|CODING|LOC_Os02g52270.1|1|1) FN-290.SNP.2:32005638 chr02:032005638 0 W/32005638-32005638 FN-290 Single Base Substitution T-C INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1494-S.SNP.2:32010847 chr02:032010847 0 W/32010847-32010847 FN1494-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os02g52280 expressed protein SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4140-S.SNP.2:32013534 chr02:032013534 0 W/32013534-32013534 FN4140-S SNP T -> G AC=2;AN=170;BQB=0.997607;DP=2401;DP4=1282,1045,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.5794e-14;MQSB=0.996734;RPB=0.182845;SGB=101.184;VDB=0.477257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S523A|1037|LOC_Os02g52280|protein_coding|CODING|LOC_Os02g52280.1|12|1) FN2114-S.SNP.2:32025170 chr02:032025170 0 W/32025170-32025170 FN2114-S SNP A -> T AC=2;AN=168;BQB=0.0995583;DP=1907;DP4=827,1018,5,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.61081e-05;MQSB=0.998641;RPB=0.592701;SGB=-37.2282;VDB=0.713206;EFF=INTRON(MODIFIER||||162|LOC_Os02g52314|protein_coding|CODING|LOC_Os02g52314.1|3|1) FN2721-S.SNP.2:32028292 chr02:032028292 0 W/32028292-32028292 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.408587;DP=5308;DP4=2464,2517,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.04824e-08;MQSB=0.970407;RPB=0.935759;SGB=33.0593;VDB=0.500538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.2:32028763 chr02:032028763 0 W/32028763-32028763 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.748358;DP=1834;DP4=907,854,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.00258743;MQSB=0.0530322;RPB=0.906148;SGB=20.5959;VDB=0.0522394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.2:32030635 chr02:032030635 0 W/32030635-32030635 FN1651-S Single Base Substitution C-T INTRON Homo SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3795-S.SNP.2:32030635 chr02:032030635 0 W/32030635-32030635 FN3795-S SNP C -> T AC=1;AN=190;BQB=0.822275;DP=3411;DP4=1747,1539,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.64719e-11;MQSB=0.8795;RPB=0.0680044;SGB=90.0802;VDB=0.13069;EFF=INTRON(MODIFIER||||278|LOC_Os02g52330|protein_coding|CODING|LOC_Os02g52330.1|3|1) FN4077-S.SNP.2:32030635 chr02:032030635 0 W/32030635-32030635 FN4077-S SNP C -> T AC=2;AN=182;BQB=0.968544;DP=3322;DP4=1748,1480,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.43381e-14;MQSB=0.990347;RPB=0.790835;SGB=116.285;VDB=0.514912;EFF=INTRON(MODIFIER||||278|LOC_Os02g52330|protein_coding|CODING|LOC_Os02g52330.1|3|1) FN4160-S.SNP.2:32030635 chr02:032030635 0 W/32030635-32030635 FN4160-S SNP C -> T AC=2;AN=170;BQB=0.94637;DP=2839;DP4=1514,1227,22,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.0708e-22;MQSB=0.99532;RPB=0.936041;SGB=163.381;VDB=0.216453;EFF=INTRON(MODIFIER||||278|LOC_Os02g52330|protein_coding|CODING|LOC_Os02g52330.1|3|1) FN526-S.SNP.2:32032299 chr02:032032299 0 W/32032299-32032299 FN526-S Single Base Substitution G-T INTRON HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN354-S.SNP.2:32035475 chr02:032035475 0 W/32035475-32035475 FN354-S Single Base Substitution C-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. W276-2-1.SNP.2:32039529 chr02:032039529 0 W/32039529-32039529 W276-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1508-S.SNP.2:32042403 chr02:032042403 0 W/32042403-32042403 FN1508-S Single Base Substitution A-T INTRON Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2532-S.SNP.2:32047420 chr02:032047420 0 W/32047420-32047420 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.44265;DP=3827;DP4=1749,1855,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000261301;MQB=1.40627e-06;MQSB=0.968654;RPB=0.58101;SGB=32.9588;VDB=0.824963;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.2:32047420 chr02:032047420 0 W/32047420-32047420 FN4083-S SNP G -> A AC=2;AN=182;BQB=0.909793;DP=2698;DP4=1018,1566,12,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.16006e-15;MQSB=0.587886;RPB=0.945096;SGB=143.35;VDB=0.486176;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.2:32047420 chr02:032047420 0 W/32047420-32047420 FN476-S Single Base Substitution G-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.2:32047420 chr02:032047420 0 W/32047420-32047420 FN935-S Single Base Substitution G-A INTERGENIC HOMO SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN-53.SNP.2:32052559 chr02:032052559 0 W/32052559-32052559 FN-53 Single Base Substitution C-T INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2729-S.SNP.2:32058510 chr02:032058510 0 W/32058510-32058510 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.969306;DP=5006;DP4=2374,2348,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.00202e-15;MQSB=0.682973;RPB=0.64377;SGB=72.7161;VDB=0.048299;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.2:32059200 chr02:032059200 0 W/32059200-32059200 FN4124-S SNP C -> G AC=1;AN=182;BQB=0.87092;DP=3855;DP4=1989,1779,10,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.10168e-07;MQSB=0.981403;RPB=0.878247;SGB=57.644;VDB=0.0290127;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G364R|430|LOC_Os02g52380|protein_coding|CODING|LOC_Os02g52380.1|1|1) FN477-S.SNP.2:32063255 chr02:032063255 0 W/32063255-32063255 FN477-S Single Base Substitution G-T INTRON HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2667-S.SNP.2:32063413 chr02:032063413 0 W/32063413-32063413 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.999954;DP=4990;DP4=2457,2324,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1913e-08;MQSB=0.917194;RPB=0.247437;SGB=24.2746;VDB=0.405613;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F179|1078|LOC_Os02g52390|protein_coding|CODING|LOC_Os02g52390.1|3|1) FN2211-S.SNP.2:32066567 chr02:032066567 0 W/32066567-32066567 FN2211-S SNP A -> G AC=1;AN=190;BQB=0.998653;DP=5204;DP4=2442,2404,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.87736e-09;MQSB=0.95497;RPB=0.970363;SGB=26.2136;VDB=0.485546;EFF=INTRON(MODIFIER||||1078|LOC_Os02g52390|protein_coding|CODING|LOC_Os02g52390.1|11|1) FN732-S.SNP.2:32078010 chr02:032078010 0 W/32078010-32078010 FN732-S Single Base Substitution G-T INTRON HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN429-S.SNP.2:32081505 chr02:032081505 0 W/32081505-32081505 FN429-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g52420 peptidase, M24 family protein, putative, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-312.SNP.2:32082078 chr02:032082078 0 W/32082078-32082078 FN-312 Single Base Substitution T-A INTRON HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN3411-S.SNP.2:32082179 chr02:032082179 0 W/32082179-32082179 FN3411-S SNP C -> A AC=1;AN=184;BQB=0.990983;DP=2369;DP4=1222,1091,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64412e-08;MQSB=0.873416;RPB=0.936667;SGB=53.2642;VDB=0.797017;EFF=SPLICE_SITE_DONOR(HIGH||||370|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.1|9|1),SPLICE_SITE_DONOR(HIGH||||235|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.2|8|1),SPLICE_SITE_DONOR(HIGH||||202|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.3|8|1),INTRON(MODIFIER||||370|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.1|9|1),INTRON(MODIFIER||||235|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.2|8|1),INTRON(MODIFIER||||202|LOC_Os02g52420|protein_coding|CODING|LOC_Os02g52420.3|8|1);LOF=(LOC_Os02g52420|LOC_Os02g52420|3|1.00) FN596-S.SNP.2:32086780 chr02:032086780 0 W/32086780-32086780 FN596-S Single Base Substitution T-C INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2655-S.SNP.2:32094795 chr02:032094795 0 W/32094795-32094795 FN2655-S SNP G -> A AC=2;AN=200;BQB=0.946181;DP=4512;DP4=1796,2416,21,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2885e-22;MQSB=0.296887;RPB=0.955979;SGB=159.24;VDB=0.862246;EFF=UTR_5_PRIME(MODIFIER||1409||168|LOC_Os02g52450|protein_coding|CODING|LOC_Os02g52450.3|1|1) FN2668-S.SNP.2:32100281 chr02:032100281 0 W/32100281-32100281 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.291456;DP=4764;DP4=2321,2210,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.47296e-14;MQSB=0.968647;RPB=0.926282;SGB=42.5108;VDB=0.575856;EFF=INTRON(MODIFIER||||363|LOC_Os02g52470|protein_coding|CODING|LOC_Os02g52470.1|8|1),INTRON(MODIFIER||||363|LOC_Os02g52470|protein_coding|CODING|LOC_Os02g52470.2|8|1) FN-76.SNP.2:32104422 chr02:032104422 0 W/32104422-32104422 FN-76 Single Base Substitution G-A INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN_786-4-1.SNP.2:32107384 chr02:032107384 0 W/32107384-32107384 FN_786-4-1 Single Base Substitution T-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-277.SNP.2:32108794 chr02:032108794 0 W/32108794-32108794 FN-277 Single Base Substitution C-T INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN492-S.SNP.2:32121611 chr02:032121611 0 W/32121611-32121611 FN492-S Single Base Substitution C-T INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3370-S.SNP.2:32124769 chr02:032124769 0 W/32124769-32124769 FN3370-S SNP A -> G AC=1;AN=184;BQB=0.394666;DP=2812;DP4=1493,1233,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03805e-08;MQSB=0.954627;RPB=0.856597;SGB=33.3622;VDB=0.935976;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.2:32127299 chr02:032127299 0 W/32127299-32127299 FN798-S Single Base Substitution A-T INTRON HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3425-S.SNP.2:32131124 chr02:032131124 0 W/32131124-32131124 FN3425-S SNP T -> C AC=1;AN=184;BQB=0.817136;DP=2500;DP4=1213,1189,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01198e-08;MQSB=0.965931;RPB=0.998967;SGB=18.2315;VDB=0.940627;EFF=INTRON(MODIFIER||||980|LOC_Os02g52510|protein_coding|CODING|LOC_Os02g52510.1|9|1) FN632-S.SNP.2:32135065 chr02:032135065 0 W/32135065-32135065 FN632-S Single Base Substitution C-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN-410.SNP.2:32137886 chr02:032137886 0 W/32137886-32137886 FN-410 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g52520 retrotransposon protein, putative, unclassified, expressed SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2620-S.SNP.2:32138999 chr02:032138999 0 W/32138999-32138999 FN2620-S SNP A -> T AC=1;AN=198;BQB=0.708854;DP=3780;DP4=1877,1563,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0021164;MQB=4.61802e-06;MQSB=3.10304e-15;RPB=0.750236;SGB=63.0809;VDB=0.73538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q835L|1939|LOC_Os02g52520|protein_coding|CODING|LOC_Os02g52520.1|2|1) FN2292.SNP.2:32143355 chr02:032143355 0 W/32143355-32143355 FN2292 SNP G -> A AC=1;AN=192;BQB=0.0116;DP=5016;DP4=2267,2342,18,8;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0450558;MQB=5.81473e-07;MQSB=0.561692;RPB=0.206473;SGB=-100.803;VDB=0.623204;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q977*|1025|LOC_Os02g52530|protein_coding|CODING|LOC_Os02g52530.1|3|1) FN4010-S.SNP.2:32144692 chr02:032144692 0 W/32144692-32144692 FN4010-S SNP G -> A AC=1;AN=168;BQB=0.976413;DP=3775;DP4=2246,1386,20,20;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.317616;MQB=0.00347554;MQSB=3.62552e-14;RPB=0.948938;SGB=127.38;VDB=0.811878;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P531L|1025|LOC_Os02g52530|protein_coding|CODING|LOC_Os02g52530.1|3|1) FN1093-S.SNP.2:32146241 chr02:032146241 0 W/32146241-32146241 FN1093-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g52530 retrotransposon protein, putative, unclassified, expressed SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3484-S.SNP.2:32148456 chr02:032148456 0 W/32148456-32148456 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.90225;DP=3616;DP4=1938,1580,16,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09894e-14;MQSB=0.941365;RPB=0.960171;SGB=85.0529;VDB=0.709956;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.2:32158193 chr02:032158193 0 W/32158193-32158193 FN1415-S Single Base Substitution G-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN-186.SNP.2:32171202 chr02:032171202 0 W/32171202-32171202 FN-186 Single Base Substitution G-A INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2448.SNP.2:32172582 chr02:032172582 0 W/32172582-32172582 FN2448 SNP G -> A AC=1;AN=200;BQB=0.913043;DP=3494;DP4=2119,1177,6,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.023755;MQB=0.573357;MQSB=1.30856e-37;RPB=0.640533;SGB=29.4541;VDB=0.241135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.2:32176460 chr02:032176460 0 W/32176460-32176460 FN3420-S SNP C -> T AC=2;AN=184;BQB=0.819398;DP=3111;DP4=1223,1759,13,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.7816e-13;MQSB=0.992534;RPB=0.997395;SGB=89.4385;VDB=0.214125;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.2:32176920 chr02:032176920 0 W/32176920-32176920 FN946-S Single Base Substitution A-G INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN-370.SNP.2:32179249 chr02:032179249 0 W/32179249-32179249 FN-370 Single Base Substitution C-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1400-S.SNP.2:32190580 chr02:032190580 0 W/32190580-32190580 FN1400-S Single Base Substitution A-G INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2395.SNP.2:32190635 chr02:032190635 0 W/32190635-32190635 FN2395 SNP G -> A AC=1;AN=200;BQB=0.628527;DP=4580;DP4=2309,2038,10,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=9.32025e-07;MQSB=4.62883e-13;RPB=0.848811;SGB=32.0901;VDB=0.0520867;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.2:32201101 chr02:032201101 0 W/32201101-32201101 FN4272-S SNP A -> G AC=1;AN=170;BQB=0.951484;DP=2568;DP4=1360,1114,14,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00605e-12;MQSB=0.987548;RPB=0.924482;SGB=72.7472;VDB=0.351116;EFF=INTRON(MODIFIER||||261|LOC_Os02g52650|protein_coding|CODING|LOC_Os02g52650.1|2|1) 701-3.SNP.2:32203112 chr02:032203112 0 W/32203112-32203112 701-3 Single Base Substitution G-A INTRON HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN1662-S.SNP.2:32207222 chr02:032207222 0 W/32207222-32207222 FN1662-S Single Base Substitution C-T INTERGENIC Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN1630-S.SNP.2:32212683 chr02:032212683 0 W/32212683-32212683 FN1630-S Single Base Substitution C-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2554-S.SNP.2:32225367 chr02:032225367 0 W/32225367-32225367 FN2554-S SNP G -> T AC=2;AN=198;BQB=0.906305;DP=4110;DP4=1701,2149,20,20;HOB=0.019998;ICB=0.495001;MQ=37;MQ0F=0.0900243;MQB=0.186785;MQSB=0;RPB=0.670694;SGB=44.442;VDB=0.691945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.2:32226240 chr02:032226240 0 W/32226240-32226240 FN1575-S Single Base Substitution G-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN978-S.SNP.2:32227242 chr02:032227242 0 W/32227242-32227242 FN978-S Single Base Substitution T-G INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2342.SNP.2:32228134 chr02:032228134 0 W/32228134-32228134 FN2342 SNP T -> A AC=1;AN=192;BQB=0.899306;DP=4935;DP4=2270,2316,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0330294;MQB=0.392853;MQSB=0.900658;RPB=0.68332;SGB=68.2948;VDB=0.918654;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R1707|1852|LOC_Os02g52690|protein_coding|CODING|LOC_Os02g52690.1|4|1) FN2204-S.SNP.2:32230623 chr02:032230623 0 W/32230623-32230623 FN2204-S SNP C -> T AC=2;AN=190;BQB=0.552108;DP=5580;DP4=2511,2742,23,15;HOB=0.020831;ICB=0.494793;MQ=19;MQ0F=0.415591;MQB=0.000481738;MQSB=0;RPB=0.988819;SGB=124.947;VDB=0.447312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G878R|1852|LOC_Os02g52690|protein_coding|CODING|LOC_Os02g52690.1|4|1) FN1216-S.SNP.2:32234118 chr02:032234118 0 W/32234118-32234118 FN1216-S Single Base Substitution G-T INTRON HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN2282.SNP.2:32234785 chr02:032234785 0 W/32234785-32234785 FN2282 SNP A -> G AC=1;AN=192;BQB=0.226756;DP=4658;DP4=2260,1994,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00300558;MQB=3.77454e-09;MQSB=0.753112;RPB=0.281303;SGB=31.4783;VDB=0.367594;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V13|1852|LOC_Os02g52690|protein_coding|CODING|LOC_Os02g52690.1|1|1) FN2281.SNP.2:32236315 chr02:032236315 0 W/32236315-32236315 FN2281 SNP C -> T AC=1;AN=192;BQB=0.626814;DP=4151;DP4=2018,1693,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00457721;MQB=6.78702e-06;MQSB=0.60013;RPB=0.464201;SGB=39.1713;VDB=0.747629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.2:32240475 chr02:032240475 0 W/32240475-32240475 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.692908;DP=3511;DP4=1552,1766,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56229e-11;MQSB=0.988802;RPB=0.808686;SGB=81.7147;VDB=0.53743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.2:32258921 chr02:032258921 0 W/32258921-32258921 FN2172-S SNP G -> T AC=1;AN=168;BQB=0.186227;DP=4004;DP4=1716,2251,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4103e-11;MQSB=0.965974;RPB=0.872487;SGB=-12.3568;VDB=0.89939;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.2:32268254 chr02:032268254 0 W/32268254-32268254 FN432-S Single Base Substitution A-C INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-182.SNP.2:32268423 chr02:032268423 0 W/32268423-32268423 FN-182 Single Base Substitution C-G INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN631-S.SNP.2:32274569 chr02:032274569 0 W/32274569-32274569 FN631-S Single Base Substitution C-T INTRON HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN4120-S.SNP.2:32277291 chr02:032277291 0 W/32277291-32277291 FN4120-S SNP A -> T AC=2;AN=182;BQB=0.0672477;DP=2910;DP4=1281,1487,12,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.50326e-09;MQSB=0.999659;RPB=0.915286;SGB=45.7418;VDB=0.310975;EFF=INTRON(MODIFIER||||357|LOC_Os02g52780|protein_coding|CODING|LOC_Os02g52780.1|3|1) FN1690-S.SNP.2:32278526 chr02:032278526 0 W/32278526-32278526 FN1690-S SNP T -> C AC=1;AN=188;BQB=0.20312;DP=4063;DP4=1948,2091,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000985289;MQSB=0.959943;RPB=0.683329;SGB=-34.1676;VDB=0.840737;EFF=INTRON(MODIFIER||||357|LOC_Os02g52780|protein_coding|CODING|LOC_Os02g52780.1|3|1) FN2150-S.SNP.2:32282191 chr02:032282191 0 W/32282191-32282191 FN2150-S SNP G -> A AC=1;AN=168;BQB=0.185061;DP=2044;DP4=1222,783,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.28416e-07;MQSB=0.926042;RPB=0.991676;SGB=-60.2222;VDB=0.262032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.2:32293083 chr02:032293083 0 W/32293083-32293083 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.983897;DP=3497;DP4=1787,1672,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.67318e-12;MQSB=0.963829;RPB=0.597613;SGB=48.9237;VDB=0.254581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.2:32293566 chr02:032293566 0 W/32293566-32293566 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.164383;DP=4937;DP4=2670,2050,19,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25139e-19;MQSB=0.975021;RPB=0.0941136;SGB=146.368;VDB=0.775822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.2:32296089 chr02:032296089 0 W/32296089-32296089 FN2171-S SNP A -> G AC=1;AN=168;BQB=0.00881603;DP=3609;DP4=2149,1419,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.87567e-08;MQSB=0.971635;RPB=0.758875;SGB=-69.6373;VDB=0.830585;EFF=INTRON(MODIFIER||||485|LOC_Os02g52820|protein_coding|CODING|LOC_Os02g52820.1|2|1) FN-384.SNP.2:32317254 chr02:032317254 0 W/32317254-32317254 FN-384 Single Base Substitution G-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1118-S.SNP.2:32319212 chr02:032319212 0 W/32319212-32319212 FN1118-S Single Base Substitution T-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1707-S.SNP.2:32320025 chr02:032320025 0 W/32320025-32320025 FN1707-S SNP G -> C AC=2;AN=188;BQB=0.988739;DP=3739;DP4=1876,1820,18,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.18861e-16;MQSB=0.999691;RPB=0.0727522;SGB=24.0577;VDB=0.0913991;EFF=INTRON(MODIFIER||||368|LOC_Os02g52860|protein_coding|CODING|LOC_Os02g52860.1|4|1) FN2383.SNP.2:32323847 chr02:032323847 0 W/32323847-32323847 FN2383 SNP G -> A AC=1;AN=192;BQB=0.771702;DP=4098;DP4=1789,2048,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04266e-11;MQSB=0.943783;RPB=0.371679;SGB=57.6018;VDB=0.41073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.2:32334099 chr02:032334099 0 W/32334099-32334099 FN3386-S SNP C -> G AC=1;AN=184;BQB=0.949202;DP=3913;DP4=1845,1928,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07811e-10;MQSB=0.941538;RPB=0.341346;SGB=62.3078;VDB=0.351174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.2:32334105 chr02:032334105 0 W/32334105-32334105 FN3386-S SNP G -> T AC=1;AN=184;BQB=0.987243;DP=3914;DP4=1843,1837,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12741e-10;MQSB=0.961094;RPB=0.608681;SGB=66.8296;VDB=0.900864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.2:32335054 chr02:032335054 0 W/32335054-32335054 FN2105-S SNP T -> G AC=1;AN=168;BQB=0.835511;DP=3766;DP4=1791,1948,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23882e-07;MQSB=0.995962;RPB=0.966521;SGB=34.748;VDB=0.0750233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.2:32339123 chr02:032339123 0 W/32339123-32339123 FN2788-S SNP G -> C AC=2;AN=198;BQB=0.574352;DP=3885;DP4=1733,1912,14,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.68558e-21;MQSB=0.84087;RPB=0.360098;SGB=144.408;VDB=0.957158;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.2:32353874 chr02:032353874 0 W/32353874-32353874 FN453-S Single Base Substitution T-A INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN453-S.SNP.2:32353875 chr02:032353875 0 W/32353875-32353875 FN453-S Single Base Substitution C-A INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN453-S.SNP.2:32353876 chr02:032353876 0 W/32353876-32353876 FN453-S Single Base Substitution A-C INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN742-S.SNP.2:32356005 chr02:032356005 0 W/32356005-32356005 FN742-S Single Base Substitution T-A INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN742-S.SNP.2:32356006 chr02:032356006 0 W/32356006-32356006 FN742-S Single Base Substitution C-T INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. W416-6-1.SNP.2:32357475 chr02:032357475 0 W/32357475-32357475 W416-6-1 Single Base Substitution A-T INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1109-S.SNP.2:32357838 chr02:032357838 0 W/32357838-32357838 FN1109-S Single Base Substitution T-G INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1327-S.SNP.2:32359566 chr02:032359566 0 W/32359566-32359566 FN1327-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g52930 integral membrane protein DUF6 containing protein, expressed SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3305-S.SNP.2:32359777 chr02:032359777 0 W/32359777-32359777 FN3305-S SNP T -> G AC=1;AN=184;BQB=0.961043;DP=4042;DP4=2362,1498,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000247402;MQB=2.71052e-09;MQSB=0.911029;RPB=0.848605;SGB=53.3568;VDB=0.549846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Cgc|S310R|384|LOC_Os02g52930|protein_coding|CODING|LOC_Os02g52930.1|5|1),SPLICE_SITE_REGION(LOW||||384|LOC_Os02g52930|protein_coding|CODING|LOC_Os02g52930.1|5|1) FN1020-S.SNP.2:32359820 chr02:032359820 0 W/32359820-32359820 FN1020-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2450.SNP.2:32363250 chr02:032363250 0 W/32363250-32363250 FN2450 SNP G -> T AC=1;AN=200;BQB=0.438122;DP=5484;DP4=3116,2053,12,27;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0371991;MQB=0.00225966;MQSB=3.25856e-36;RPB=0.398381;SGB=-567.204;VDB=0.0119049;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.2:32373333 chr02:032373333 0 W/32373333-32373333 FN-121 Single Base Substitution A-C INTRON HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-208.SNP.2:32381787 chr02:032381787 0 W/32381787-32381787 FN-208 Single Base Substitution T-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2630-S.SNP.2:32383759 chr02:032383759 0 W/32383759-32383759 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.73406;DP=5072;DP4=2411,2436,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51361e-13;MQSB=0.999961;RPB=0.923059;SGB=109.527;VDB=0.985234;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.2:32394853 chr02:032394853 0 W/32394853-32394853 FN378-S Single Base Substitution T-A SPLICE_SITE_REGION HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN4094-S.SNP.2:32395222 chr02:032395222 0 W/32395222-32395222 FN4094-S SNP A -> G AC=2;AN=182;BQB=0.998428;DP=2984;DP4=1385,1528,15,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.29939e-12;MQSB=0.671696;RPB=0.942138;SGB=63.7146;VDB=0.327852;EFF=UTR_3_PRIME(MODIFIER||133||1486|LOC_Os02g52960|protein_coding|CODING|LOC_Os02g52960.1|19|1) FN1657-S.SNP.2:32398023 chr02:032398023 0 W/32398023-32398023 FN1657-S Single Base Substitution A-T INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3822-S.SNP.2:32403610 chr02:032403610 0 W/32403610-32403610 FN3822-S SNP T -> C AC=1;AN=190;BQB=0.935623;DP=2804;DP4=1215,1452,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00606277;MQB=0.00353195;MQSB=3.79983e-10;RPB=0.620734;SGB=-3.65821;VDB=0.477568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.2:32403680 chr02:032403680 0 W/32403680-32403680 FN2169-S SNP A -> T AC=1;AN=168;BQB=6.25552e-05;DP=3477;DP4=1454,1986,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00316365;MQB=0.00048049;MQSB=2.22653e-10;RPB=0.114634;SGB=-185.485;VDB=0.0480034;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.2:32409771 chr02:032409771 0 W/32409771-32409771 FN1067-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os02g52970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2415.SNP.2:32414506 chr02:032414506 0 W/32414506-32414506 FN2415 SNP A -> T AC=1;AN=200;BQB=0.408251;DP=4646;DP4=2074,2267,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.0380528;MQSB=0.994929;RPB=0.90757;SGB=-1.74624;VDB=0.902127;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T45|871|LOC_Os02g52980|protein_coding|CODING|LOC_Os02g52980.1|2|1) FN2711-S.SNP.2:32418001 chr02:032418001 0 W/32418001-32418001 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.933281;DP=5245;DP4=2544,2333,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.04796e-10;MQSB=0.799855;RPB=0.986777;SGB=54.6902;VDB=0.820237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.2:32424534 chr02:032424534 0 W/32424534-32424534 FN2451 SNP T -> A AC=1;AN=200;BQB=0.618896;DP=5021;DP4=2601,2001,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41567e-17;MQSB=0.821258;RPB=0.74005;SGB=63.3521;VDB=0.718539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.2:32437411 chr02:032437411 0 W/32437411-32437411 FN1686-S SNP C -> T AC=2;AN=188;BQB=0.629864;DP=2769;DP4=1210,1486,21,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.78507e-23;MQSB=0.999347;RPB=0.787138;SGB=56.9604;VDB=0.453922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.2:32443416 chr02:032443416 0 W/32443416-32443416 FN2125-S SNP G -> A AC=2;AN=168;BQB=0.90913;DP=2455;DP4=863,1516,14,24;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=4.44994e-14;MQSB=0.614921;RPB=0.568851;SGB=78.0935;VDB=0.459049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.2:32450008 chr02:032450008 0 W/32450008-32450008 FN1499-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4082-S.SNP.2:32453138 chr02:032453138 0 W/32453138-32453138 FN4082-S SNP C -> T AC=1;AN=182;BQB=0.690355;DP=3849;DP4=1810,1962,7,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.4433e-08;MQSB=0.962603;RPB=0.532293;SGB=53.182;VDB=0.249373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.2:32453312 chr02:032453312 0 W/32453312-32453312 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.933947;DP=4149;DP4=1907,2077,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.86671e-10;MQSB=0.957278;RPB=0.62367;SGB=68.91;VDB=0.409804;EFF=INTERGENIC(MODIFIER||||||||||1) FN4144-S.SNP.2:32453599 chr02:032453599 0 W/32453599-32453599 FN4144-S SNP A -> T AC=1;AN=170;BQB=0.521691;DP=2566;DP4=1145,1322,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.14834e-05;MQSB=0.866169;RPB=0.843935;SGB=56.7575;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.2:32456255 chr02:032456255 0 W/32456255-32456255 FN742-S Single Base Substitution G-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3629-S.SNP.2:32456372 chr02:032456372 0 W/32456372-32456372 FN3629-S SNP C -> T AC=2;AN=190;BQB=0.764326;DP=2945;DP4=1352,1460,8,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.10811e-08;MQSB=0.520268;RPB=0.643798;SGB=76.4186;VDB=0.626322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.2:32467930 chr02:032467930 0 W/32467930-32467930 FN2086-S SNP T -> C AC=1;AN=168;BQB=0.123044;DP=3473;DP4=1433,1985,19,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89028e-09;MQSB=0.998101;RPB=0.898641;SGB=-308.309;VDB=0.850065;EFF=INTRON(MODIFIER||||246|LOC_Os02g53060|protein_coding|CODING|LOC_Os02g53060.1|1|1),INTRON(MODIFIER||||141|LOC_Os02g53060|protein_coding|CODING|LOC_Os02g53060.2|1|1) FN-124.SNP.2:32470692 chr02:032470692 0 W/32470692-32470692 FN-124 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN3592-S.SNP.2:32477789 chr02:032477789 0 W/32477789-32477789 FN3592-S SNP G -> A AC=1;AN=188;BQB=0.995789;DP=3002;DP4=1198,1656,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.55616e-13;MQSB=0.947312;RPB=0.241057;SGB=43.8792;VDB=0.296357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.2:32499182 chr02:032499182 0 W/32499182-32499182 FN4128-S SNP T -> C AC=2;AN=182;BQB=0.99992;DP=2644;DP4=1248,1313,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.99795e-13;MQSB=0.977393;RPB=0.679486;SGB=98.2417;VDB=0.62346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.2:32513178 chr02:032513178 0 W/32513178-32513178 FN2678-S SNP G -> T AC=1;AN=200;BQB=0.937569;DP=4778;DP4=2183,2345,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53553e-18;MQSB=0.804387;RPB=0.816417;SGB=63.3521;VDB=0.0499189;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.2:32515114 chr02:032515114 0 W/32515114-32515114 FN4044-S SNP C -> T AC=2;AN=168;BQB=0.998464;DP=2772;DP4=1202,1429,15,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.77e-16;MQSB=0.835666;RPB=0.732592;SGB=93.0718;VDB=0.33665;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E520K|889|LOC_Os02g53130|protein_coding|CODING|LOC_Os02g53130.1|4|1) FN4187-S.SNP.2:32516393 chr02:032516393 0 W/32516393-32516393 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.886748;DP=2830;DP4=1428,1319,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.07012e-10;MQSB=0.909606;RPB=0.98845;SGB=65.6427;VDB=0.68766;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S212|889|LOC_Os02g53130|protein_coding|CODING|LOC_Os02g53130.1|1|1) FN3675-S.SNP.2:32518823 chr02:032518823 0 W/32518823-32518823 FN3675-S SNP A -> G AC=2;AN=190;BQB=0.447111;DP=3028;DP4=1614,1337,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000330251;MQB=9.88622e-13;MQSB=0.960793;RPB=0.719006;SGB=85.8548;VDB=0.652531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.2:32525034 chr02:032525034 0 W/32525034-32525034 FN3311-S SNP A -> G AC=1;AN=184;BQB=0.372893;DP=2962;DP4=1288,1286,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.80906e-07;MQSB=0.183763;RPB=0.647402;SGB=-60.7031;VDB=0.882537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.2:32529580 chr02:032529580 0 W/32529580-32529580 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.85049;DP=2749;DP4=1218,1420,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.32702e-09;MQSB=0.928011;RPB=0.356743;SGB=71.8647;VDB=0.962676;EFF=INTRON(MODIFIER||||685|LOC_Os02g53140|protein_coding|CODING|LOC_Os02g53140.1|9|1) W7-1-1.SNP.2:32530870 chr02:032530870 0 W/32530870-32530870 W7-1-1 Single Base Substitution G-A INTRON HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2290.SNP.2:32539212 chr02:032539212 0 W/32539212-32539212 FN2290 SNP C -> T AC=1;AN=192;BQB=0.797366;DP=5154;DP4=2406,2371,17,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2418e-20;MQSB=0.884144;RPB=0.567455;SGB=40.2061;VDB=0.218196;EFF=INTRON(MODIFIER||||204|LOC_Os02g53160|protein_coding|CODING|LOC_Os02g53160.1|2|1) FN3782-S.SNP.2:32540992 chr02:032540992 0 W/32540992-32540992 FN3782-S SNP T -> C AC=2;AN=190;BQB=0.987348;DP=2895;DP4=1418,1390,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30066e-13;MQSB=0.7693;RPB=0.99105;SGB=99.1879;VDB=0.622485;EFF=INTRON(MODIFIER||||204|LOC_Os02g53160|protein_coding|CODING|LOC_Os02g53160.1|2|1) FN-315.SNP.2:32559293 chr02:032559293 0 W/32559293-32559293 FN-315 Single Base Substitution C-T INTRON HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1304-S.SNP.2:32563866 chr02:032563866 0 W/32563866-32563866 FN1304-S Single Base Substitution C-T INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2484.SNP.2:32568008 chr02:032568008 0 W/32568008-32568008 FN2484 SNP G -> A AC=1;AN=200;BQB=0.786774;DP=4483;DP4=2259,2045,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97262e-08;MQSB=0.912967;RPB=0.315291;SGB=19.0642;VDB=0.719481;EFF=INTRON(MODIFIER||||513|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.1|1|1),INTRON(MODIFIER||||488|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.2|2|1) FN3935-S.SNP.2:32568789 chr02:032568789 0 W/32568789-32568789 FN3935-S SNP T -> A AC=2;AN=158;BQB=0.784741;DP=2679;DP4=1234,1245,17,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.04401e-10;MQSB=0.459161;RPB=0.815993;SGB=52.2521;VDB=0.158099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S363C|488|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S388C|513|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.1|1|1) FN1688-S.SNP.2:32568860 chr02:032568860 0 W/32568860-32568860 FN1688-S SNP T -> C AC=1;AN=188;BQB=0.673061;DP=1781;DP4=812,906,1,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000308964;MQSB=0.999153;RPB=0.979959;SGB=30.8063;VDB=0.566336;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y339C|488|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y364C|513|LOC_Os02g53200|protein_coding|CODING|LOC_Os02g53200.1|1|1) FN3729-S.SNP.2:32571835 chr02:032571835 0 W/32571835-32571835 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.965171;DP=2997;DP4=1537,1308,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.34536e-12;MQSB=0.997155;RPB=0.23567;SGB=64.5316;VDB=0.971081;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.2:32574300 chr02:032574300 0 W/32574300-32574300 FN-114 Single Base Substitution G-T INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN4149-S.SNP.2:32574300 chr02:032574300 0 W/32574300-32574300 FN4149-S SNP G -> T AC=2;AN=170;BQB=0.997939;DP=2161;DP4=1231,855,19,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08785e-16;MQSB=0.993846;RPB=0.99335;SGB=79.6325;VDB=0.757883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.2:32579613 chr02:032579613 0 W/32579613-32579613 FN-258 Single Base Substitution T-C INTRON HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN550-S.SNP.2:32611230 chr02:032611230 0 W/32611230-32611230 FN550-S Single Base Substitution A-G INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN2134-S.SNP.2:32614496 chr02:032614496 0 W/32614496-32614496 FN2134-S SNP T -> C AC=1;AN=168;BQB=0.45151;DP=3269;DP4=1759,1428,11,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04144e-14;MQSB=0.982762;RPB=0.017817;SGB=-128.892;VDB=0.208628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.2:32614635 chr02:032614635 0 W/32614635-32614635 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.640042;DP=4958;DP4=2532,2161,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36599e-12;MQSB=0.986885;RPB=0.804577;SGB=58.2954;VDB=0.380423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.2:32622731 chr02:032622731 0 W/32622731-32622731 FN2157-S SNP G -> A AC=1;AN=168;BQB=0.0129668;DP=2118;DP4=1138,874,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.71553e-05;MQSB=0.639513;RPB=0.932801;SGB=-14.9417;VDB=0.301672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.2:32625278 chr02:032625278 0 W/32625278-32625278 FN1466-S Single Base Substitution A-G INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. W463-2-1.SNP.2:32629371 chr02:032629371 0 W/32629371-32629371 W463-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN438-S.SNP.2:32635123 chr02:032635123 0 W/32635123-32635123 FN438-S Single Base Substitution T-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN3419-S.SNP.2:32640447 chr02:032640447 0 W/32640447-32640447 FN3419-S SNP T -> G AC=1;AN=184;BQB=0.979679;DP=2528;DP4=1301,1145,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.76388e-08;MQSB=0.997885;RPB=0.944084;SGB=57.786;VDB=0.366444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.2:32641941 chr02:032641941 0 W/32641941-32641941 FN1494-S Single Base Substitution G-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1521-S.SNP.2:32641964 chr02:032641964 0 W/32641964-32641964 FN1521-S Single Base Substitution C-A INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN630-S.SNP.2:32644567 chr02:032644567 0 W/32644567-32644567 FN630-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN880-S.SNP.2:32653599 chr02:032653599 0 W/32653599-32653599 FN880-S Single Base Substitution T-G INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN4123-S.SNP.2:32660813 chr02:032660813 0 W/32660813-32660813 FN4123-S SNP G -> T AC=1;AN=182;BQB=0.972507;DP=3686;DP4=1599,2000,12,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.56181e-13;MQSB=0.998462;RPB=0.603075;SGB=102.753;VDB=0.105061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.2:32666170 chr02:032666170 0 W/32666170-32666170 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.726317;DP=3100;DP4=1358,1599,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.73636e-09;MQSB=0.896766;RPB=0.596463;SGB=30.8405;VDB=0.711698;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.2:32671215 chr02:032671215 0 W/32671215-32671215 FN459-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g53380 expressed protein SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2456.SNP.2:32673594 chr02:032673594 0 W/32673594-32673594 FN2456 SNP C -> T AC=1;AN=200;BQB=0.766276;DP=3213;DP4=1364,1564,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65195e-06;MQSB=0.97427;RPB=0.758095;SGB=25.849;VDB=0.135844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R28H|700|LOC_Os02g53380|protein_coding|CODING|LOC_Os02g53380.1|1|1) FN3856-S.SNP.2:32678535 chr02:032678535 0 W/32678535-32678535 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.798354;DP=2196;DP4=1064,1010,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.90114e-05;MQSB=0.535837;RPB=0.419983;SGB=23.9652;VDB=0.0398324;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.2:32689999 chr02:032689999 0 W/32689999-32689999 FN488-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2685-S.SNP.2:32696296 chr02:032696296 0 W/32696296-32696296 FN2685-S SNP T -> C AC=1;AN=200;BQB=0.96232;DP=5167;DP4=2571,2395,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24836e-10;MQSB=0.779478;RPB=0.927847;SGB=26.8797;VDB=0.0842421;EFF=INTRON(MODIFIER||||286|LOC_Os02g53430|protein_coding|CODING|LOC_Os02g53430.1|3|1) FN3772-S.SNP.2:32698841 chr02:032698841 0 W/32698841-32698841 FN3772-S SNP T -> A AC=2;AN=190;BQB=0.985525;DP=2768;DP4=1381,1278,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93998e-09;MQSB=0.654507;RPB=0.926098;SGB=57.4238;VDB=0.197533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.2:32716315 chr02:032716315 0 W/32716315-32716315 FN2684-S SNP T -> A AC=2;AN=200;BQB=0.701401;DP=5191;DP4=2481,2451,30,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08065e-25;MQSB=0.870448;RPB=0.887479;SGB=94.6142;VDB=0.0741641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.2:32716873 chr02:032716873 0 W/32716873-32716873 FN3653-S SNP A -> T AC=2;AN=190;BQB=0.666578;DP=2877;DP4=1276,1331,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.54692e-16;MQSB=0.999689;RPB=0.530862;SGB=46.6446;VDB=0.663282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.2:32716874 chr02:032716874 0 W/32716874-32716874 FN3653-S SNP C -> T AC=2;AN=190;BQB=0.966201;DP=2882;DP4=1377,1371,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.4695e-15;MQSB=0.99694;RPB=0.379436;SGB=71.6393;VDB=0.423255;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.2:32717996 chr02:032717996 0 W/32717996-32717996 FN626-S Single Base Substitution A-C INTRON HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2597-S.SNP.2:32719836 chr02:032719836 0 W/32719836-32719836 FN2597-S SNP T -> G AC=1;AN=198;BQB=0.463962;DP=4425;DP4=2055,2175,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.47599e-12;MQSB=0.990081;RPB=0.982501;SGB=81.7147;VDB=0.387785;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.2:32720109 chr02:032720109 0 W/32720109-32720109 FN3442-S SNP A -> T AC=1;AN=184;BQB=0.915117;DP=2669;DP4=1265,1344,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.75979e-05;MQSB=0.933929;RPB=0.555285;SGB=35.1773;VDB=0.107985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.2:32739275 chr02:032739275 0 W/32739275-32739275 FN3298-S SNP T -> G AC=1;AN=184;BQB=0.970562;DP=2843;DP4=1272,1465,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60455e-06;MQSB=0.967903;RPB=0.2799;SGB=21.6609;VDB=0.106182;EFF=INTRON(MODIFIER||||1007|LOC_Os02g53520|protein_coding|CODING|LOC_Os02g53520.1|2|1) FN3970-S.SNP.2:32742089 chr02:032742089 0 W/32742089-32742089 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.975952;DP=2754;DP4=1326,1303,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.40116e-12;MQSB=0.803995;RPB=0.999356;SGB=29.4772;VDB=0.448738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.2:32742090 chr02:032742090 0 W/32742090-32742090 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.521848;DP=2756;DP4=1315,1307,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.32602e-11;MQSB=0.698488;RPB=0.977737;SGB=27.0464;VDB=0.604818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.2:32749350 chr02:032749350 0 W/32749350-32749350 FN1760-S SNP T -> C AC=1;AN=188;BQB=0.289273;DP=3973;DP4=2079,1859,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.19518e-11;MQSB=0.998489;RPB=0.72224;SGB=17.8846;VDB=0.179478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.2:32752918 chr02:032752918 0 W/32752918-32752918 FN1464-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1236-S.SNP.2:32754303 chr02:032754303 0 W/32754303-32754303 FN1236-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1552-S.SNP.2:32754303 chr02:032754303 0 W/32754303-32754303 FN1552-S SNP A -> G AC=2;AN=188;BQB=0.856507;DP=3495;DP4=1757,1663,29,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.0316e-22;MQSB=0.793027;RPB=0.373254;SGB=-50.609;VDB=0.062726;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.2:32757077 chr02:032757077 0 W/32757077-32757077 FN2739-S SNP G -> T AC=1;AN=200;BQB=0.746635;DP=4976;DP4=2617,2109,12,7;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0213023;MQB=0.778466;MQSB=0.821745;RPB=0.656573;SGB=58.2954;VDB=0.800228;EFF=START_LOST(HIGH|MISSENSE|atG/atT|M1I|1065|LOC_Os02g53540|protein_coding|CODING|LOC_Os02g53540.1|1|1);LOF=(LOC_Os02g53540|LOC_Os02g53540|1|1.00) FN1036-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN1036-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1338-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN1338-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1643-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN1643-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2118-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN2118-S SNP C -> T AC=2;AN=168;BQB=0.891239;DP=1801;DP4=787,941,14,18;HOB=0.0235261;ICB=0.494119;MQ=20;MQ0F=0.230983;MQB=0.015595;MQSB=0.504826;RPB=0.997766;SGB=131.232;VDB=0.967296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN2283.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN2283 SNP C -> T AC=1;AN=192;BQB=0.864639;DP=5257;DP4=2315,2612,19,29;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.0544037;MQB=0.243059;MQSB=0;RPB=0.97935;SGB=213.527;VDB=0.665687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN2431.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN2431 SNP C -> T AC=1;AN=200;BQB=0.481566;DP=4649;DP4=2024,2361,9,6;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.0554958;MQB=0.898828;MQSB=0;RPB=0.739409;SGB=43.8747;VDB=0.618272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN3449-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN3449-S SNP C -> T AC=1;AN=184;BQB=0.937851;DP=3966;DP4=2072,1801,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0461422;MQB=0.87232;MQSB=0.993652;RPB=0.71274;SGB=84.9167;VDB=0.215597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN3557-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN3557-S SNP C -> T AC=1;AN=188;BQB=0.997208;DP=4242;DP4=2309,1857,16,10;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0445545;MQB=0.354249;MQSB=0.389091;RPB=0.744667;SGB=112.585;VDB=0.573531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN3723-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.590167;DP=2469;DP4=1115,1269,4,8;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0498177;MQB=0.624664;MQSB=0.994274;RPB=0.536676;SGB=49.0954;VDB=0.686666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN3834-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.986811;DP=3107;DP4=1492,1537,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0421629;MQB=0.81637;MQSB=0.982185;RPB=0.994307;SGB=44.5415;VDB=0.265497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN3864-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN3864-S SNP C -> T AC=2;AN=158;BQB=0.935477;DP=2730;DP4=1313,1315,18,21;HOB=0.024996;ICB=0.493752;MQ=34;MQ0F=0.0542125;MQB=0.898071;MQSB=0.0715014;RPB=0.974337;SGB=165.042;VDB=0.367147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A781T|1877|LOC_Os02g53550|protein_coding|CODING|LOC_Os02g53550.1|4|1) FN692-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN692-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN870-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN870-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN959-S.SNP.2:32764606 chr02:032764606 0 W/32764606-32764606 FN959-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN738-S.SNP.2:32769282 chr02:032769282 0 W/32769282-32769282 FN738-S Single Base Substitution C-A INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN738-S.SNP.2:32769283 chr02:032769283 0 W/32769283-32769283 FN738-S Single Base Substitution A-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN_798-4-2.SNP.2:32775476 chr02:032775476 0 W/32775476-32775476 FN_798-4-2 Single Base Substitution G-A HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN793-S.SNP.2:32786252 chr02:032786252 0 W/32786252-32786252 FN793-S Single Base Substitution G-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3771-S.SNP.2:32793594 chr02:032793594 0 W/32793594-32793594 FN3771-S SNP A -> C AC=2;AN=190;BQB=0.999999;DP=2948;DP4=1177,1571,8,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.57284e-13;MQSB=0.998605;RPB=0.998784;SGB=51.7524;VDB=0.476218;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.2:32795789 chr02:032795789 0 W/32795789-32795789 FN848-S Single Base Substitution T-G INTRON HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2453.SNP.2:32799699 chr02:032799699 0 W/32799699-32799699 FN2453 SNP A -> G AC=2;AN=200;BQB=0.176146;DP=4826;DP4=2456,2090,31,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.18182e-30;MQSB=0.996498;RPB=0.268548;SGB=252.287;VDB=0.361685;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.2:32817567 chr02:032817567 0 W/32817567-32817567 FN565-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2584-S.SNP.2:32819202 chr02:032819202 0 W/32819202-32819202 FN2584-S SNP C -> T AC=2;AN=198;BQB=0.440743;DP=4084;DP4=1921,1865,41,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.87413e-38;MQSB=0.925657;RPB=0.244887;SGB=242.094;VDB=0.940548;EFF=INTERGENIC(MODIFIER||||||||||1) FN1002-S.SNP.2:32821501 chr02:032821501 0 W/32821501-32821501 FN1002-S Single Base Substitution G-C INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN4104-S.SNP.2:32821856 chr02:032821856 0 W/32821856-32821856 FN4104-S SNP G -> T AC=2;AN=182;BQB=0.833782;DP=3112;DP4=1578,1472,6,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.26341e-09;MQSB=0.815302;RPB=0.999082;SGB=62.1548;VDB=0.959174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.2:32823604 chr02:032823604 0 W/32823604-32823604 FN1039-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g53660 expressed protein SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN996-S.SNP.2:32826447 chr02:032826447 0 W/32826447-32826447 FN996-S Single Base Substitution A-G INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN2163-S.SNP.2:32838453 chr02:032838453 0 W/32838453-32838453 FN2163-S SNP T -> C AC=1;AN=168;BQB=0.594173;DP=2977;DP4=1298,1558,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46378e-06;MQSB=1.47365e-20;RPB=0.620849;SGB=27.0464;VDB=0.0401878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.2:32840279 chr02:032840279 0 W/32840279-32840279 FN3465-S SNP A -> T AC=1;AN=184;BQB=0.514959;DP=3189;DP4=1633,1388,15,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.67737e-12;MQSB=0.951205;RPB=0.513488;SGB=56.0583;VDB=0.238962;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.2:32840304 chr02:032840304 0 W/32840304-32840304 FN439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1268-S.SNP.2:32842539 chr02:032842539 0 W/32842539-32842539 FN1268-S Single Base Substitution C-A INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1268-S.SNP.2:32842541 chr02:032842541 0 W/32842541-32842541 FN1268-S Single Base Substitution G-A INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN808-S.SNP.2:32843519 chr02:032843519 0 W/32843519-32843519 FN808-S Single Base Substitution T-A INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN1156-S.SNP.2:32843776 chr02:032843776 0 W/32843776-32843776 FN1156-S Single Base Substitution T-C INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2785-S.SNP.2:32847064 chr02:032847064 0 W/32847064-32847064 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.999765;DP=4025;DP4=1915,1937,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.10841e-08;MQSB=0.395839;RPB=0.442103;SGB=54.5295;VDB=0.0239927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.2:32863623 chr02:032863623 0 W/32863623-32863623 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.671788;DP=2442;DP4=1149,1232,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.18854e-05;MQSB=0.99999;RPB=0.428942;SGB=13.4442;VDB=0.892818;EFF=INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.1|11|1),INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.2|11|1),INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.3|11|1),INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.4|11|1),INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.5|11|1),INTRON(MODIFIER||||796|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.6|11|1),INTRON(MODIFIER||||832|LOC_Os02g53700|protein_coding|CODING|LOC_Os02g53700.7|11|1) FN2735-S.SNP.2:32872840 chr02:032872840 0 W/32872840-32872840 FN2735-S SNP G -> A AC=1;AN=200;BQB=0.955673;DP=5422;DP4=2688,2447,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34927e-11;MQSB=0.981673;RPB=0.718155;SGB=34.6953;VDB=0.564751;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.2:32873126 chr02:032873126 0 W/32873126-32873126 FN-264 Single Base Substitution C-T INTERGENIC HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-264.SNP.2:32873127 chr02:032873127 0 W/32873127-32873127 FN-264 Single Base Substitution C-T INTERGENIC HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN485-S.SNP.2:32876122 chr02:032876122 0 W/32876122-32876122 FN485-S Single Base Substitution C-T INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1573-S.SNP.2:32877352 chr02:032877352 0 W/32877352-32877352 FN1573-S Single Base Substitution C-G INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1550-S.SNP.2:32880981 chr02:032880981 0 W/32880981-32880981 FN1550-S Single Base Substitution A-C INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN4011-S.SNP.2:32883733 chr02:032883733 0 W/32883733-32883733 FN4011-S SNP T -> C AC=1;AN=168;BQB=0.05965;DP=3051;DP4=1426,1479,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00298643;MQSB=0.994649;RPB=0.151467;SGB=38.1788;VDB=0.376737;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.2:32887375 chr02:032887375 0 W/32887375-32887375 FN994-S Single Base Substitution G-T INTRON HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN2315.SNP.2:32907677 chr02:032907677 0 W/32907677-32907677 FN2315 SNP A -> T AC=2;AN=192;BQB=0.934202;DP=5123;DP4=2359,2460,27,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.03015e-25;MQSB=0.685757;RPB=0.746839;SGB=213.527;VDB=0.220848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K220N|873|LOC_Os02g53740|protein_coding|CODING|LOC_Os02g53740.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K220N|790|LOC_Os02g53740|protein_coding|CODING|LOC_Os02g53740.3|6|1) FN_789-2-1.SNP.2:32914946 chr02:032914946 0 W/32914946-32914946 FN_789-2-1 Single Base Substitution G-A Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN3783-S.SNP.2:32916531 chr02:032916531 0 W/32916531-32916531 FN3783-S SNP C -> A AC=1;AN=190;BQB=0.762821;DP=3246;DP4=1607,1506,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.42305e-12;MQSB=0.999818;RPB=0.427009;SGB=44.0907;VDB=0.716511;EFF=UTR_5_PRIME(MODIFIER||70||246|LOC_Os02g53750|protein_coding|CODING|LOC_Os02g53750.2|2|1),INTRON(MODIFIER||||449|LOC_Os02g53750|protein_coding|CODING|LOC_Os02g53750.1|3|1) FN430-S.SNP.2:32917087 chr02:032917087 0 W/32917087-32917087 FN430-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3310-S.SNP.2:32922750 chr02:032922750 0 W/32922750-32922750 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.69551;DP=3317;DP4=1178,2016,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43407e-05;MQSB=0.994226;RPB=0.994437;SGB=25.1826;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.2:32924161 chr02:032924161 0 W/32924161-32924161 FN3323-S SNP A -> G AC=2;AN=184;BQB=0.788087;DP=2669;DP4=1024,1504,11,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.78046e-11;MQSB=0.0524116;RPB=0.999903;SGB=80.3949;VDB=0.265788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.2:32926517 chr02:032926517 0 W/32926517-32926517 FN2207-S SNP C -> G AC=2;AN=190;BQB=0.884782;DP=5106;DP4=2263,2515,20,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.66533e-27;MQSB=0.784671;RPB=0.665501;SGB=55.389;VDB=0.536558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.2:32929964 chr02:032929964 0 W/32929964-32929964 FN2460 SNP A -> T AC=1;AN=200;BQB=0.0219969;DP=4524;DP4=2100,2116,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.11537e-08;MQSB=0.753397;RPB=0.442389;SGB=51.0851;VDB=0.314006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.2:32937903 chr02:032937903 0 W/32937903-32937903 FN3400-S SNP C -> G AC=2;AN=184;BQB=0.637509;DP=2479;DP4=1140,1221,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.42461e-12;MQSB=0.875586;RPB=0.839943;SGB=103.004;VDB=0.457578;EFF=INTRON(MODIFIER||||1058|LOC_Os02g53770|protein_coding|CODING|LOC_Os02g53770.1|8|1) FN-336.SNP.2:32948553 chr02:032948553 0 W/32948553-32948553 FN-336 Single Base Substitution T-C INTRON HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN1576-S.SNP.2:32954174 chr02:032954174 0 W/32954174-32954174 FN1576-S Single Base Substitution C-A SPLICE_SITE_REGION HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1349-S.SNP.2:32956318 chr02:032956318 0 W/32956318-32956318 FN1349-S Single Base Substitution C-A INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN2130-S.SNP.2:32959529 chr02:032959529 0 W/32959529-32959529 FN2130-S SNP G -> T AC=1;AN=168;BQB=0.0289986;DP=3849;DP4=1754,2052,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24894e-06;MQSB=0.981712;RPB=0.625797;SGB=-87.7854;VDB=0.232344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S251I|427|LOC_Os02g53810|protein_coding|CODING|LOC_Os02g53810.1|4|1) FN581-S.SNP.2:32964951 chr02:032964951 0 W/32964951-32964951 FN581-S Single Base Substitution G-T INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1103-S.SNP.2:32965525 chr02:032965525 0 W/32965525-32965525 FN1103-S Single Base Substitution T-G INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1103-S.SNP.2:32965757 chr02:032965757 0 W/32965757-32965757 FN1103-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1440-S.SNP.2:32970450 chr02:032970450 0 W/32970450-32970450 FN1440-S Single Base Substitution T-A INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN791-S.SNP.2:32972612 chr02:032972612 0 W/32972612-32972612 FN791-S Single Base Substitution G-A INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2197-S.SNP.2:32974324 chr02:032974324 0 W/32974324-32974324 FN2197-S SNP G -> A AC=1;AN=190;BQB=0.994831;DP=8461;DP4=4526,3376,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.0104007;MQB=0.852305;MQSB=0;RPB=0.892662;SGB=-13.7759;VDB=0.183541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.2:32975836 chr02:032975836 0 W/32975836-32975836 FN2323 SNP G -> A AC=1;AN=192;BQB=0.000911504;DP=5399;DP4=2391,2604,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0394518;MQB=0.0264173;MQSB=1.83301e-19;RPB=0.501979;SGB=-39.2487;VDB=0.564174;EFF=UTR_5_PRIME(MODIFIER||129||127|LOC_Os02g53835|protein_coding|CODING|LOC_Os02g53835.1|1|1) FN-240.SNP.2:32980557 chr02:032980557 0 W/32980557-32980557 FN-240 Single Base Substitution G-A INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN669-S.SNP.2:32988724 chr02:032988724 0 W/32988724-32988724 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4224-S.SNP.2:32993161 chr02:032993161 0 W/32993161-32993161 FN4224-S SNP T -> A AC=2;AN=170;BQB=0.936203;DP=2615;DP4=1233,1204,21,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.53448e-14;MQSB=0.486215;RPB=0.575379;SGB=93.4031;VDB=0.839591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.2:32996665 chr02:032996665 0 W/32996665-32996665 FN-122 Single Base Substitution T-A INTERGENIC HOMO SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3830-S.SNP.2:32999160 chr02:032999160 0 W/32999160-32999160 FN3830-S SNP A -> C AC=1;AN=190;BQB=0.848644;DP=2705;DP4=1178,1397,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41964e-08;MQSB=0.985065;RPB=0.630329;SGB=62.7569;VDB=0.94058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.2:33005487 chr02:033005487 0 W/33005487-33005487 FN2677-S SNP G -> T AC=1;AN=200;BQB=0.620267;DP=4662;DP4=2257,2112,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002145;MQB=6.1294e-14;MQSB=0.999992;RPB=0.619631;SGB=76.3213;VDB=0.35199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.2:33009426 chr02:033009426 0 W/33009426-33009426 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.894159;DP=3966;DP4=1808,1980,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16567e-09;MQSB=0.896581;RPB=0.715187;SGB=24.1541;VDB=0.912931;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S387|690|LOC_Os02g53910|protein_coding|CODING|LOC_Os02g53910.1|1|1) FN3757-S.SNP.2:33024481 chr02:033024481 0 W/33024481-33024481 FN3757-S SNP T -> C AC=1;AN=190;BQB=0.689014;DP=1789;DP4=337,1320,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.09782;MQB=0.129536;MQSB=6.32583e-21;RPB=0.848285;SGB=28.7675;VDB=0.397502;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.2:33025226 chr02:033025226 0 W/33025226-33025226 FN963-S Single Base Substitution A-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3355-S.SNP.2:33025248 chr02:033025248 0 W/33025248-33025248 FN3355-S SNP A -> T AC=1;AN=184;BQB=0.54016;DP=1978;DP4=907,940,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000301225;MQSB=0.251486;RPB=0.976549;SGB=28.7043;VDB=0.995348;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.2:33025263 chr02:033025263 0 W/33025263-33025263 FN526-S Single Base Substitution T-G INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1348-S.SNP.2:33026907 chr02:033026907 0 W/33026907-33026907 FN1348-S Single Base Substitution A-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3709-S.SNP.2:33028343 chr02:033028343 0 W/33028343-33028343 FN3709-S SNP G -> A AC=2;AN=190;BQB=1;DP=2798;DP4=1425,1186,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2512e-14;MQSB=0.92619;RPB=0.986549;SGB=85.8548;VDB=0.571002;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.2:33031181 chr02:033031181 0 W/33031181-33031181 FN791-S Single Base Substitution G-A INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN522-S.SNP.2:33032635 chr02:033032635 0 W/33032635-33032635 FN522-S Single Base Substitution G-T INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN2296.SNP.2:33033127 chr02:033033127 0 W/33033127-33033127 FN2296 SNP T -> A AC=1;AN=192;BQB=0.603657;DP=4256;DP4=1947,1892,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.41672e-06;MQSB=0.934919;RPB=0.979488;SGB=18.6565;VDB=0.738493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.2:33034313 chr02:033034313 0 W/33034313-33034313 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.883458;DP=3996;DP4=1977,1653,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21299e-10;MQSB=0.995861;RPB=0.137774;SGB=76.4186;VDB=0.0419274;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.2:33035917 chr02:033035917 0 W/33035917-33035917 W426-1-1 Single Base Substitution G-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3795-S.SNP.2:33049280 chr02:033049280 0 W/33049280-33049280 FN3795-S SNP A -> T AC=1;AN=190;BQB=0.963477;DP=2249;DP4=1481,657,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2947e-08;MQSB=0.241694;RPB=0.948721;SGB=43.2083;VDB=0.560746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.2:33049281 chr02:033049281 0 W/33049281-33049281 FN3795-S SNP T -> C AC=1;AN=190;BQB=0.996944;DP=2246;DP4=1475,441,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37102e-08;MQSB=0.163741;RPB=0.966566;SGB=-13.7759;VDB=0.480731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.2:33050915 chr02:033050915 0 W/33050915-33050915 FN2756-S SNP G -> T AC=1;AN=200;BQB=0.022241;DP=3590;DP4=1454,1708,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45422e-08;MQSB=0.300917;RPB=0.968297;SGB=40.2696;VDB=0.315657;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.2:33056602 chr02:033056602 0 W/33056602-33056602 FN2678-S SNP A -> T AC=1;AN=200;BQB=0.985961;DP=4655;DP4=2430,2038,14,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.010956;MQB=9.2193e-08;MQSB=0.643529;RPB=0.883725;SGB=76.3213;VDB=0.757163;EFF=INTRON(MODIFIER||||997|LOC_Os02g53990|protein_coding|CODING|LOC_Os02g53990.1|4|1) FN574-S.SNP.2:33086347 chr02:033086347 0 W/33086347-33086347 FN574-S Single Base Substitution C-A INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN499-S.SNP.2:33092372 chr02:033092372 0 W/33092372-33092372 FN499-S Single Base Substitution A-T INTRON HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2387.SNP.2:33103216 chr02:033103216 0 W/33103216-33103216 FN2387 SNP T -> A AC=1;AN=192;BQB=0.217403;DP=4893;DP4=2438,2241,23,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.40159e-25;MQSB=0.768123;RPB=0.817016;SGB=146.71;VDB=0.231678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.2:33104378 chr02:033104378 0 W/33104378-33104378 FN2337 SNP A -> T AC=1;AN=190;BQB=0.372957;DP=5078;DP4=2159,2635,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2537e-08;MQSB=0.474919;RPB=0.788541;SGB=67.4678;VDB=0.767095;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.2:33106164 chr02:033106164 0 W/33106164-33106164 FN721-S Single Base Substitution T-C INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN1265-S.SNP.2:33108888 chr02:033108888 0 W/33108888-33108888 FN1265-S Single Base Substitution T-G INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN735-S.SNP.2:33110260 chr02:033110260 0 W/33110260-33110260 FN735-S Single Base Substitution T-G INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN-171.SNP.2:33110797 chr02:033110797 0 W/33110797-33110797 FN-171 Single Base Substitution C-G INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN4066-S.SNP.2:33112546 chr02:033112546 0 W/33112546-33112546 FN4066-S SNP T -> C AC=1;AN=168;BQB=0.450924;DP=2725;DP4=1426,1109,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.2136e-08;MQSB=0.887243;RPB=0.0878683;SGB=-35.5206;VDB=0.285527;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.2:33112553 chr02:033112553 0 W/33112553-33112553 FN4066-S SNP A -> G AC=1;AN=168;BQB=0.981177;DP=2707;DP4=1498,1111,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23178e-05;MQSB=0.994235;RPB=0.109246;SGB=30.0193;VDB=0.259674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:33114092 chr02:033114092 0 W/33114092-33114092 FN2572-S SNP A -> T AC=1;AN=198;BQB=0.97289;DP=4163;DP4=2117,1831,25,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2663e-22;MQSB=0.778205;RPB=0.359916;SGB=148.003;VDB=0.153773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.2:33114092 chr02:033114092 0 W/33114092-33114092 FN2572-S Single Base Substitution A-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN830-S.SNP.2:33132968 chr02:033132968 0 W/33132968-33132968 FN830-S Single Base Substitution T-G INTRON HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2317.SNP.2:33145907 chr02:033145907 0 W/33145907-33145907 FN2317 SNP C -> G AC=1;AN=192;BQB=0.460656;DP=4907;DP4=2180,2406,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.29031e-07;MQSB=0.995518;RPB=0.257684;SGB=-15.333;VDB=0.0172672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.2:33145908 chr02:033145908 0 W/33145908-33145908 FN2317 SNP T -> C AC=1;AN=192;BQB=0.936696;DP=4903;DP4=2253,2409,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.76079e-09;MQSB=0.999206;RPB=0.248319;SGB=18.6565;VDB=0.0207124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.2:33146901 chr02:033146901 0 W/33146901-33146901 FN2618-S SNP C -> A AC=2;AN=198;BQB=0.66468;DP=3677;DP4=1892,1586,30,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.63297e-20;MQSB=0.785744;RPB=0.991431;SGB=137.217;VDB=0.617919;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.2:33150057 chr02:033150057 0 W/33150057-33150057 FN4044-S SNP T -> C AC=2;AN=168;BQB=0.955046;DP=2519;DP4=1235,1191,11,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.58649e-13;MQSB=0.999431;RPB=0.275693;SGB=92.0501;VDB=0.141462;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I673|1272|LOC_Os02g54110|protein_coding|CODING|LOC_Os02g54110.1|7|1) FN-312.SNP.2:33156154 chr02:033156154 0 W/33156154-33156154 FN-312 Single Base Substitution G-A INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN3090-S.SNP.2:33158052 chr02:033158052 0 W/33158052-33158052 FN3090-S SNP G -> A AC=1;AN=184;BQB=0.952105;DP=3178;DP4=1616,1442,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.35946e-12;MQSB=0.992312;RPB=0.111907;SGB=56.8786;VDB=0.119373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.2:33168769 chr02:033168769 0 W/33168769-33168769 FN-117 Single Base Substitution A-T INTRON HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN-117.SNP.2:33168770 chr02:033168770 0 W/33168770-33168770 FN-117 Single Base Substitution A-T INTRON HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN-233.SNP.2:33171085 chr02:033171085 0 W/33171085-33171085 FN-233 Single Base Substitution C-T INTRON HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2544-S.SNP.2:33173165 chr02:033173165 0 W/33173165-33173165 FN2544-S SNP A -> G AC=1;AN=198;BQB=0.158877;DP=4491;DP4=2176,2117,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.97495e-06;MQSB=0.995179;RPB=0.914191;SGB=29.3637;VDB=0.687219;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D94|271|LOC_Os02g54130|protein_coding|CODING|LOC_Os02g54130.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D94|270|LOC_Os02g54130|protein_coding|CODING|LOC_Os02g54130.2|3|1),UTR_5_PRIME(MODIFIER||105||167|LOC_Os02g54130|protein_coding|CODING|LOC_Os02g54130.3|2|1) FN926-S.SNP.2:33173165 chr02:033173165 0 W/33173165-33173165 FN926-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1022-S.SNP.2:33177614 chr02:033177614 0 W/33177614-33177614 FN1022-S Single Base Substitution C-G INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN4234-S.SNP.2:33182473 chr02:033182473 0 W/33182473-33182473 FN4234-S SNP G -> C AC=1;AN=170;BQB=0.966705;DP=3056;DP4=1712,1254,2,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.84825e-06;MQSB=0.843188;RPB=0.300814;SGB=43.4296;VDB=0.431135;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.2:33193390 chr02:033193390 0 W/33193390-33193390 FN-238 Single Base Substitution A-T INTRON HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-106.SNP.2:33193726 chr02:033193726 0 W/33193726-33193726 FN-106 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2327.SNP.2:33203567 chr02:033203567 0 W/33203567-33203567 FN2327 SNP G -> A AC=1;AN=190;BQB=0.355791;DP=5100;DP4=2349,2345,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0203e-14;MQSB=0.931784;RPB=0.151459;SGB=24.5626;VDB=0.00405558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.2:33205961 chr02:033205961 0 W/33205961-33205961 FN1102-S Single Base Substitution G-C INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN-126.SNP.2:33207266 chr02:033207266 0 W/33207266-33207266 FN-126 Single Base Substitution G-T INTERGENIC HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2673-S.SNP.2:33207398 chr02:033207398 0 W/33207398-33207398 FN2673-S SNP T -> A AC=2;AN=200;BQB=0.417123;DP=5253;DP4=2755,2264,31,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.63173e-32;MQSB=0.930327;RPB=0.975487;SGB=141.507;VDB=0.513585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.2:33226139 chr02:033226139 0 W/33226139-33226139 FN2233-S SNP C -> A AC=2;AN=190;BQB=0.831791;DP=4341;DP4=2277,1825,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.10559e-14;MQSB=0.595331;RPB=0.218636;SGB=75.1932;VDB=0.555115;EFF=INTRON(MODIFIER||||574|LOC_Os02g54200|protein_coding|CODING|LOC_Os02g54200.1|1|1) FN1600-S.SNP.2:33235833 chr02:033235833 0 W/33235833-33235833 FN1600-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1345-S.SNP.2:33236351 chr02:033236351 0 W/33236351-33236351 FN1345-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g54210 retrotransposon protein, putative, unclassified, expressed SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2447.SNP.2:33237569 chr02:033237569 0 W/33237569-33237569 FN2447 SNP A -> C AC=1;AN=200;BQB=0.995588;DP=5124;DP4=2620,1972,5,6;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0173692;MQB=0.0498912;MQSB=3.60054e-11;RPB=0.992408;SGB=45.0543;VDB=0.794097;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aCt|N389T|1239|LOC_Os02g54210|protein_coding|CODING|LOC_Os02g54210.1|3|1) FN3487-S.SNP.2:33238494 chr02:033238494 0 W/33238494-33238494 FN3487-S SNP C -> G AC=1;AN=184;BQB=0.460424;DP=3457;DP4=1576,1742,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00231415;MQB=0.000111565;MQSB=0.000777111;RPB=0.459007;SGB=66.8296;VDB=0.369587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P483R|1239|LOC_Os02g54210|protein_coding|CODING|LOC_Os02g54210.1|4|1) FN1461-S.SNP.2:33241506 chr02:033241506 0 W/33241506-33241506 FN1461-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1085-S.SNP.2:33241532 chr02:033241532 0 W/33241532-33241532 FN1085-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g54220 retrotransposon protein, putative, unclassified, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2645-S.SNP.2:33242773 chr02:033242773 0 W/33242773-33242773 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.659949;DP=4717;DP4=2514,1847,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01175e-17;MQSB=0.917573;RPB=0.809825;SGB=127.947;VDB=0.503976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R399C|777|LOC_Os02g54220|protein_coding|CODING|LOC_Os02g54220.1|5|1) FN2467.SNP.2:33245249 chr02:033245249 0 W/33245249-33245249 FN2467 SNP G -> T AC=1;AN=200;BQB=0.997796;DP=3725;DP4=1984,1465,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000268456;MQB=1.66959e-05;MQSB=0.618021;RPB=0.983372;SGB=40.4492;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.2:33245815 chr02:033245815 0 W/33245815-33245815 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.00450309;DP=3673;DP4=1746,1877,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.69969e-11;MQSB=0.997103;RPB=0.675987;SGB=-80.6216;VDB=0.64435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.2:33257175 chr02:033257175 0 W/33257175-33257175 FN2284 SNP C -> T AC=2;AN=192;BQB=0.592152;DP=5065;DP4=2249,2555,29,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.58076e-30;MQSB=0.988186;RPB=0.799808;SGB=123.795;VDB=0.178097;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G580R|1061|LOC_Os02g54254|protein_coding|CODING|LOC_Os02g54254.1|15|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G580R|1039|LOC_Os02g54254|protein_coding|CODING|LOC_Os02g54254.2|15|1) FN480-S.SNP.2:33259979 chr02:033259979 0 W/33259979-33259979 FN480-S Single Base Substitution T-A INTRON HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1060-S.SNP.2:33267463 chr02:033267463 0 W/33267463-33267463 FN1060-S Single Base Substitution T-A INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN956-S.SNP.2:33274011 chr02:033274011 0 W/33274011-33274011 FN956-S Single Base Substitution G-A INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2725-S.SNP.2:33274863 chr02:033274863 0 W/33274863-33274863 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.0397646;DP=4240;DP4=1994,1887,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.66795e-10;MQSB=0.890025;RPB=0.751717;SGB=-106.906;VDB=0.532962;EFF=INTERGENIC(MODIFIER||||||||||1) FN710-S.SNP.2:33279299 chr02:033279299 0 W/33279299-33279299 FN710-S Single Base Substitution C-T INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN2580-S.SNP.2:33289472 chr02:033289472 0 W/33289472-33289472 FN2580-S SNP G -> A AC=2;AN=198;BQB=0.744194;DP=3872;DP4=1773,1900,23,33;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.04229e-30;MQSB=0.854042;RPB=0.774967;SGB=180.992;VDB=0.651187;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R661C|1905|LOC_Os02g54280|protein_coding|CODING|LOC_Os02g54280.1|9|1) FN2166-S.SNP.2:33299792 chr02:033299792 0 W/33299792-33299792 FN2166-S SNP T -> G AC=2;AN=168;BQB=0.317855;DP=2699;DP4=1357,1271,20,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.1606e-13;MQSB=0.981837;RPB=0.953822;SGB=-88.4675;VDB=0.361272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E120D|138|LOC_Os02g54300|protein_coding|CODING|LOC_Os02g54300.1|1|1) FN1389-S.SNP.2:33307238 chr02:033307238 0 W/33307238-33307238 FN1389-S Single Base Substitution A-G INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN-218.SNP.2:33309922 chr02:033309922 0 W/33309922-33309922 FN-218 Single Base Substitution G-A INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3781-S.SNP.2:33314871 chr02:033314871 0 W/33314871-33314871 FN3781-S SNP C -> A AC=2;AN=190;BQB=0.729083;DP=2269;DP4=1233,954,11,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.02789e-11;MQSB=0.922589;RPB=0.955628;SGB=76.4186;VDB=0.889539;EFF=INTERGENIC(MODIFIER||||||||||1) FN761-S.SNP.2:33323020 chr02:033323020 0 W/33323020-33323020 FN761-S Single Base Substitution T-A INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2202-S.SNP.2:33324441 chr02:033324441 0 W/33324441-33324441 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.878318;DP=4526;DP4=2110,2117,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000220946;MQB=1.5975e-10;MQSB=0.892185;RPB=0.662139;SGB=16.5421;VDB=0.0290382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.2:33329356 chr02:033329356 0 W/33329356-33329356 FN2551-S SNP T -> C AC=1;AN=198;BQB=0.0837073;DP=3862;DP4=1909,1388,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38282e-08;MQSB=0.999758;RPB=0.998626;SGB=-38.6649;VDB=0.770489;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.2:33329879 chr02:033329879 0 W/33329879-33329879 FN229-S Single Base Substitution T-A INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2562-S.SNP.2:33350716 chr02:033350716 0 W/33350716-33350716 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.987835;DP=3965;DP4=1873,1893,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.88002e-16;MQSB=0.281691;RPB=0.916203;SGB=90.4807;VDB=0.210692;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R95|393|LOC_Os02g54430|protein_coding|CODING|LOC_Os02g54430.1|1|1) FN3343-S.SNP.2:33351317 chr02:033351317 0 W/33351317-33351317 FN3343-S SNP T -> C AC=2;AN=184;BQB=0.833141;DP=2798;DP4=1329,1352,16,10;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0253753;MQB=7.05349e-05;MQSB=0.438266;RPB=0.996989;SGB=51.0148;VDB=0.457457;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.2:33371848 chr02:033371848 0 W/33371848-33371848 FN885-S Single Base Substitution A-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN-111.SNP.2:33377451 chr02:033377451 0 W/33377451-33377451 FN-111 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g54500 WD40-like, putative, expressed SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN2147-S.SNP.2:33377881 chr02:033377881 0 W/33377881-33377881 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.00021718;DP=4312;DP4=2292,1983,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.26528e-07;MQSB=0.988426;RPB=0.98634;SGB=-100.631;VDB=0.405047;EFF=INTRON(MODIFIER||||1123|LOC_Os02g54500|protein_coding|CODING|LOC_Os02g54500.1|13|1) FN-213.SNP.2:33390283 chr02:033390283 0 W/33390283-33390283 FN-213 Single Base Substitution A-G INTRON HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3743-S.SNP.2:33393766 chr02:033393766 0 W/33393766-33393766 FN3743-S SNP G -> C AC=2;AN=190;BQB=0.97839;DP=2775;DP4=1373,1276,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41385e-11;MQSB=0.717519;RPB=0.745163;SGB=94.6341;VDB=0.148494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.2:33395041 chr02:033395041 0 W/33395041-33395041 FN3768-S SNP C -> A AC=1;AN=190;BQB=0.77192;DP=3124;DP4=1412,1608,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02572e-07;MQSB=0.869034;RPB=0.233781;SGB=18.552;VDB=0.126368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.2:33395882 chr02:033395882 0 W/33395882-33395882 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.835125;DP=2905;DP4=1465,1308,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58676e-10;MQSB=0.994418;RPB=0.999881;SGB=66.8296;VDB=0.257102;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.2:33400184 chr02:033400184 0 W/33400184-33400184 FN2259-S SNP C -> G AC=2;AN=190;BQB=0.98894;DP=4173;DP4=1937,2034,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000239636;MQB=4.95352e-15;MQSB=0.021788;RPB=0.996972;SGB=85.8548;VDB=0.0227494;EFF=INTRON(MODIFIER||||563|LOC_Os02g54520|protein_coding|CODING|LOC_Os02g54520.1|3|1) FN1513-S.SNP.2:33406552 chr02:033406552 0 W/33406552-33406552 FN1513-S Single Base Substitution A-T INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN436-S.SNP.2:33409520 chr02:033409520 0 W/33409520-33409520 FN436-S Single Base Substitution G-A INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1293-S.SNP.2:33411210 chr02:033411210 0 W/33411210-33411210 FN1293-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1304-S.SNP.2:33413874 chr02:033413874 0 W/33413874-33413874 FN1304-S Single Base Substitution G-T INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN430-S.SNP.2:33430160 chr02:033430160 0 W/33430160-33430160 FN430-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3720-S.SNP.2:33440902 chr02:033440902 0 W/33440902-33440902 FN3720-S SNP C -> T AC=2;AN=190;BQB=0.923817;DP=2591;DP4=1401,1086,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.65743e-14;MQSB=0.894558;RPB=0.333502;SGB=78.7471;VDB=0.315109;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.2:33444664 chr02:033444664 0 W/33444664-33444664 FN-175 Single Base Substitution T-A INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-175.SNP.2:33444665 chr02:033444665 0 W/33444665-33444665 FN-175 Single Base Substitution T-A INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2458.SNP.2:33451235 chr02:033451235 0 W/33451235-33451235 FN2458 SNP T -> A AC=1;AN=200;BQB=0.947557;DP=4604;DP4=2326,1861,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.19175e-15;MQSB=0.923405;RPB=0.977597;SGB=-5.84819;VDB=0.753758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.2:33452801 chr02:033452801 0 W/33452801-33452801 FN1290-S Single Base Substitution C-T INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN525-S.SNP.2:33452980 chr02:033452980 0 W/33452980-33452980 FN525-S Single Base Substitution G-T INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN525-S.SNP.2:33452981 chr02:033452981 0 W/33452981-33452981 FN525-S Single Base Substitution G-T INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3354-S.SNP.2:33464607 chr02:033464607 0 W/33464607-33464607 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.935301;DP=3172;DP4=1704,1364,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64595e-06;MQSB=0.55941;RPB=0.721909;SGB=48.7425;VDB=0.110322;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.2:33466287 chr02:033466287 0 W/33466287-33466287 FN4032-S SNP C -> T AC=2;AN=168;BQB=0.978463;DP=2945;DP4=1355,1430,26,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.14174e-25;MQSB=0.796027;RPB=0.969928;SGB=207.251;VDB=0.10562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.2:33485515 chr02:033485515 0 W/33485515-33485515 FN2128-S SNP A -> G AC=1;AN=168;BQB=0.891095;DP=3870;DP4=1870,1958,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.22372e-11;MQSB=0.99126;RPB=0.998627;SGB=39.2004;VDB=0.00113382;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.2:33488113 chr02:033488113 0 W/33488113-33488113 FN488-S Single Base Substitution C-T INTRON HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2112-S.SNP.2:33491056 chr02:033491056 0 W/33491056-33491056 FN2112-S SNP A -> G AC=2;AN=168;BQB=0.0876691;DP=2427;DP4=1085,1277,11,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61e-09;MQSB=0.5085;RPB=0.602035;SGB=-42.3508;VDB=0.626631;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.2:33496232 chr02:033496232 0 W/33496232-33496232 FN4135-S SNP A -> T AC=2;AN=182;BQB=0.946448;DP=3180;DP4=1675,1353,22,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.62765e-25;MQSB=0.990213;RPB=0.994343;SGB=188.459;VDB=0.19258;EFF=UTR_3_PRIME(MODIFIER||76||240|LOC_Os02g54710|protein_coding|CODING|LOC_Os02g54710.1|2|1) FN1579-S.SNP.2:33497615 chr02:033497615 0 W/33497615-33497615 FN1579-S Single Base Substitution C-T INTRON HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN266-S.SNP.2:33518118 chr02:033518118 0 W/33518118-33518118 FN266-S Single Base Substitution C-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2564-S.SNP.2:33518250 chr02:033518250 0 W/33518250-33518250 FN2564-S SNP C -> A AC=1;AN=198;BQB=0.702672;DP=4108;DP4=2184,1647,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.60168e-05;MQSB=0.901808;RPB=0.158157;SGB=-34.2112;VDB=0.857554;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.2:33522854 chr02:033522854 0 W/33522854-33522854 FN2446 SNP T -> A AC=1;AN=200;BQB=0.847456;DP=4920;DP4=2412,2250,13,11;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00325203;MQB=3.9599e-07;MQSB=2.06019e-41;RPB=0.598477;SGB=47.7211;VDB=0.479605;EFF=INTRON(MODIFIER||||746|LOC_Os02g54740|protein_coding|CODING|LOC_Os02g54740.1|7|1) FN2754-S.SNP.2:33525142 chr02:033525142 0 W/33525142-33525142 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.0419603;DP=4394;DP4=2157,1978,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93128e-08;MQSB=0.0721113;RPB=0.201539;SGB=47.4799;VDB=0.567444;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.2:33536377 chr02:033536377 0 W/33536377-33536377 FN2670-S SNP T -> C AC=1;AN=200;BQB=0.996958;DP=4638;DP4=2240,2201,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26125e-15;MQSB=0.997544;RPB=0.93125;SGB=28.752;VDB=0.762937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.2:33538703 chr02:033538703 0 W/33538703-33538703 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.999983;DP=4648;DP4=2427,1997,17,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.52911e-13;MQSB=0.970102;RPB=0.885866;SGB=45.1159;VDB=0.220347;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.2:33542731 chr02:033542731 0 W/33542731-33542731 FN1344-S Single Base Substitution A-C SPLICE_SITE_REGION HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN936-S.SNP.2:33549525 chr02:033549525 0 W/33549525-33549525 FN936-S Single Base Substitution C-T INTRON HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN936-S.SNP.2:33549527 chr02:033549527 0 W/33549527-33549527 FN936-S Single Base Substitution G-A INTRON HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3675-S.SNP.2:33550618 chr02:033550618 0 W/33550618-33550618 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.932652;DP=2943;DP4=1255,1585,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08021e-06;MQSB=0.949935;RPB=0.634081;SGB=39.9877;VDB=0.0766355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.2:33565900 chr02:033565900 0 W/33565900-33565900 FN3510-S SNP G -> C AC=1;AN=188;BQB=0.994957;DP=4705;DP4=2199,2393,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00042508;MQB=2.00398e-11;MQSB=0.99991;RPB=0.192155;SGB=85.3253;VDB=0.251772;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.2:33577907 chr02:033577907 0 W/33577907-33577907 FN849-S Single Base Substitution G-A INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3879-S.SNP.2:33583618 chr02:033583618 0 W/33583618-33583618 FN3879-S SNP A -> T AC=1;AN=158;BQB=0.927084;DP=2798;DP4=1592,1101,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.72558e-10;MQSB=0.937284;RPB=0.893949;SGB=54.2901;VDB=0.778444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3728-S.SNP.2:33585310 chr02:033585310 0 W/33585310-33585310 FN3728-S SNP T -> G AC=1;AN=190;BQB=0.565032;DP=2626;DP4=1324,1202,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00805e-05;MQSB=0.996283;RPB=0.974579;SGB=21.1058;VDB=0.71632;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.2:33586304 chr02:033586304 0 W/33586304-33586304 FN401-S Single Base Substitution A-T INTERGENIC HOMO SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN-90.SNP.2:33587762 chr02:033587762 0 W/33587762-33587762 FN-90 Single Base Substitution C-T INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN2594-S.SNP.2:33594359 chr02:033594359 0 W/33594359-33594359 FN2594-S SNP C -> T AC=2;AN=198;BQB=0.530691;DP=3919;DP4=2037,1613,19,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000255167;MQB=6.79452e-19;MQSB=0.220929;RPB=0.999807;SGB=119.242;VDB=0.443303;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.2:33597538 chr02:033597538 0 W/33597538-33597538 FN-187 Single Base Substitution T-C INTRON HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3355-S.SNP.2:33619996 chr02:033619996 0 W/33619996-33619996 FN3355-S SNP C -> G AC=1;AN=184;BQB=0.753594;DP=3491;DP4=1475,1855,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14237e-05;MQSB=0.698511;RPB=0.649842;SGB=13.188;VDB=0.228818;EFF=UTR_3_PRIME(MODIFIER||68||437|LOC_Os02g54890|protein_coding|CODING|LOC_Os02g54890.1|1|1) FN3662-S.SNP.2:33644129 chr02:033644129 0 W/33644129-33644129 FN3662-S SNP T -> A AC=1;AN=190;BQB=0.886458;DP=2774;DP4=1462,1159,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.40684e-07;MQSB=0.935507;RPB=0.585531;SGB=32.5467;VDB=0.708986;EFF=INTRON(MODIFIER||||180|LOC_Os02g54930|protein_coding|CODING|LOC_Os02g54930.1|4|1) FN-181.SNP.2:33649187 chr02:033649187 0 W/33649187-33649187 FN-181 Single Base Substitution A-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-181.SNP.2:33649188 chr02:033649188 0 W/33649188-33649188 FN-181 Single Base Substitution A-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-185.SNP.2:33657148 chr02:033657148 0 W/33657148-33657148 FN-185 Single Base Substitution T-A INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2756-S.SNP.2:33660546 chr02:033660546 0 W/33660546-33660546 FN2756-S SNP G -> A AC=2;AN=200;BQB=0.641042;DP=5398;DP4=2646,2462,10,18;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00185254;MQB=1.17244e-09;MQSB=0.0201124;RPB=0.471353;SGB=123.342;VDB=0.303638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P349S|388|LOC_Os02g54950|protein_coding|CODING|LOC_Os02g54950.1|3|1) FN1290-S.SNP.2:33664082 chr02:033664082 0 W/33664082-33664082 FN1290-S Single Base Substitution A-G INTRON HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN601-S.SNP.2:33668084 chr02:033668084 0 W/33668084-33668084 FN601-S Single Base Substitution G-T INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2467.SNP.2:33669720 chr02:033669720 0 W/33669720-33669720 FN2467 SNP T -> C AC=1;AN=200;BQB=0.998766;DP=4751;DP4=2342,1990,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.11963e-15;MQSB=0.553883;RPB=0.820801;SGB=-7.05853;VDB=0.198892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.2:33673084 chr02:033673084 0 W/33673084-33673084 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.772505;DP=3968;DP4=1216,2322,5,10;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00252016;MQB=0.125968;MQSB=4.49817e-43;RPB=0.322483;SGB=-34.5259;VDB=0.000849298;EFF=INTRON(MODIFIER||||117|LOC_Os02g54970|protein_coding|CODING|LOC_Os02g54970.1|1|1) FN1304-S.SNP.2:33674046 chr02:033674046 0 W/33674046-33674046 FN1304-S Single Base Substitution T-C INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN3064-S.SNP.2:33676124 chr02:033676124 0 W/33676124-33676124 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.959203;DP=2918;DP4=1224,1589,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.17859e-06;MQSB=0.91518;RPB=0.745829;SGB=44.2207;VDB=0.345322;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.2:33676205 chr02:033676205 0 W/33676205-33676205 FN416-S Single Base Substitution G-T INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1494-S.SNP.2:33676719 chr02:033676719 0 W/33676719-33676719 FN1494-S Single Base Substitution G-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2467.SNP.2:33677822 chr02:033677822 0 W/33677822-33677822 FN2467 SNP A -> C AC=1;AN=200;BQB=0.949443;DP=4854;DP4=2175,2427,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.71816e-15;MQSB=0.960681;RPB=0.998906;SGB=90.7419;VDB=0.0988676;EFF=INTERGENIC(MODIFIER||||||||||1) FN-130.SNP.2:33683611 chr02:033683611 0 W/33683611-33683611 FN-130 Single Base Substitution T-A INTERGENIC HET SNo: 130, Mutant_ID: FN-130, Generation: M2, Mutations: 30, Genes: 61, Seed availability: Yes. FN1555-S.SNP.2:33683822 chr02:033683822 0 W/33683822-33683822 FN1555-S Single Base Substitution G-T INTERGENIC HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN-102.SNP.2:33685812 chr02:033685812 0 W/33685812-33685812 FN-102 Single Base Substitution T-G INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN-102.SNP.2:33685813 chr02:033685813 0 W/33685813-33685813 FN-102 Single Base Substitution A-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN414-S.SNP.2:33687588 chr02:033687588 0 W/33687588-33687588 FN414-S Single Base Substitution A-C INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN4074-S.SNP.2:33687698 chr02:033687698 0 W/33687698-33687698 FN4074-S SNP T -> C AC=2;AN=182;BQB=0.908553;DP=2020;DP4=665,1283,6,13;HOB=0.0217365;ICB=0.494567;MQ=42;MQ0F=0.010396;MQB=0.93343;MQSB=3.58878e-05;RPB=0.208531;SGB=56.6929;VDB=0.486867;EFF=INTERGENIC(MODIFIER||||||||||1) FN-97.SNP.2:33713415 chr02:033713415 0 W/33713415-33713415 FN-97 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g55030 hydrolase, NUDIX family, domain containing protein, expressed SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN883-S.SNP.2:33722931 chr02:033722931 0 W/33722931-33722931 FN883-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g55050 OsFBX64 - F-box domain containing protein, expressed SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3526-S.SNP.2:33724536 chr02:033724536 0 W/33724536-33724536 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.967585;DP=1551;DP4=882,602,7,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.03011e-05;MQSB=0.571828;RPB=0.999938;SGB=30.8063;VDB=0.0153953;EFF=INTRON(MODIFIER||||477|LOC_Os02g55050|protein_coding|CODING|LOC_Os02g55050.2|1|1),INTRON(MODIFIER||||477|LOC_Os02g55050|protein_coding|CODING|LOC_Os02g55050.1|1|1) FN2639-S.SNP.2:33725287 chr02:033725287 0 W/33725287-33725287 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.386706;DP=5131;DP4=2554,2164,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76156e-19;MQSB=0.997181;RPB=0.492024;SGB=137.158;VDB=0.444089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.2:33727811 chr02:033727811 0 W/33727811-33727811 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.81341;DP=2923;DP4=1257,1559,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.7246e-07;MQSB=0.74408;RPB=0.324425;SGB=21.1058;VDB=0.297415;EFF=UTR_3_PRIME(MODIFIER||340||102|LOC_Os02g55060|protein_coding|CODING|LOC_Os02g55060.1|1|1),INTRON(MODIFIER||||102|LOC_Os02g55060|protein_coding|CODING|LOC_Os02g55060.2|1|1) FN3919-S.SNP.2:33731218 chr02:033731218 0 W/33731218-33731218 FN3919-S SNP G -> T AC=1;AN=158;BQB=0.820942;DP=2258;DP4=931,1208,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.29683e-08;MQSB=0.839129;RPB=0.711824;SGB=26.1881;VDB=0.177244;EFF=INTRON(MODIFIER||||523|LOC_Os02g55070|protein_coding|CODING|LOC_Os02g55070.1|2|1) FN1443-S.SNP.2:33733056 chr02:033733056 0 W/33733056-33733056 FN1443-S Single Base Substitution C-T STOP_GAINED HET LOC_Os02g55070 expressed protein SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1619-S.SNP.2:33733631 chr02:033733631 0 W/33733631-33733631 FN1619-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g55070 expressed protein SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1494-S.SNP.2:33735211 chr02:033735211 0 W/33735211-33735211 FN1494-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os02g55080 snf1-related kinase interactor 2, putative, expressed SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2348.SNP.2:33738604 chr02:033738604 0 W/33738604-33738604 FN2348 SNP T -> C AC=1;AN=192;BQB=0.20623;DP=4707;DP4=2491,1808,17,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021245;MQB=1.7519e-09;MQSB=0.41264;RPB=0.579262;SGB=41.7357;VDB=0.945913;EFF=UTR_3_PRIME(MODIFIER||335||520|LOC_Os02g55090|protein_coding|CODING|LOC_Os02g55090.1|4|1) FN883-S.SNP.2:33743162 chr02:033743162 0 W/33743162-33743162 FN883-S Single Base Substitution G-C INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2362.SNP.2:33752750 chr02:033752750 0 W/33752750-33752750 FN2362 SNP G -> A AC=1;AN=192;BQB=0.893257;DP=5016;DP4=2539,2202,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.27939e-06;MQSB=0.730312;RPB=0.876105;SGB=21.2209;VDB=0.895711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A297T|1369|LOC_Os02g55110|protein_coding|CODING|LOC_Os02g55110.1|1|1) FN1292-S.SNP.2:33756061 chr02:033756061 0 W/33756061-33756061 FN1292-S Single Base Substitution G-A INTRON HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1062-S.SNP.2:33765168 chr02:033765168 0 W/33765168-33765168 FN1062-S Single Base Substitution T-C INTERGENIC HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1568-S.SNP.2:33766950 chr02:033766950 0 W/33766950-33766950 FN1568-S Single Base Substitution T-C INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1717-S.SNP.2:33766950 chr02:033766950 0 W/33766950-33766950 FN1717-S SNP T -> C AC=1;AN=188;BQB=0.879053;DP=4063;DP4=1875,2152,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24014e-09;MQSB=0.99284;RPB=0.712804;SGB=41.3359;VDB=0.088272;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.2:33766950 chr02:033766950 0 W/33766950-33766950 FN242-S Single Base Substitution T-C INTERGENIC HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN1406-S.SNP.2:33777625 chr02:033777625 0 W/33777625-33777625 FN1406-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2334.SNP.2:33782972 chr02:033782972 0 W/33782972-33782972 FN2334 SNP T -> A AC=2;AN=192;BQB=0.887874;DP=4080;DP4=1986,1691,16,9;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.28198e-12;MQSB=0.048705;RPB=0.86778;SGB=-9.68954;VDB=0.269632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.2:33782973 chr02:033782973 0 W/33782973-33782973 FN3699-S SNP A -> T AC=1;AN=190;BQB=0.931939;DP=1996;DP4=896,963,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16641e-09;MQSB=0.276466;RPB=0.813281;SGB=-13.222;VDB=0.0197034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.2:33786909 chr02:033786909 0 W/33786909-33786909 FN2379 SNP G -> A AC=1;AN=192;BQB=0.729183;DP=5184;DP4=2653,2260,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.69894e-13;MQSB=0.729819;RPB=0.991651;SGB=90.2896;VDB=0.45304;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S296F|363|LOC_Os02g55150|protein_coding|CODING|LOC_Os02g55150.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S220F|287|LOC_Os02g55150|protein_coding|CODING|LOC_Os02g55150.2|10|1) FN1634-S.SNP.2:33789179 chr02:033789179 0 W/33789179-33789179 FN1634-S Single Base Substitution T-A INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN4145-S.SNP.2:33791337 chr02:033791337 0 W/33791337-33791337 FN4145-S SNP C -> T AC=2;AN=170;BQB=0.995893;DP=2385;DP4=854,1411,8,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.01723e-11;MQSB=0.968743;RPB=0.765241;SGB=96.7413;VDB=0.149353;EFF=START_GAINED(LOW||||312|LOC_Os02g55160|protein_coding|CODING|LOC_Os02g55160.1|1|1),UTR_5_PRIME(MODIFIER||152||312|LOC_Os02g55160|protein_coding|CODING|LOC_Os02g55160.1|1|1) FN3377-S.SNP.2:33791379 chr02:033791379 0 W/33791379-33791379 FN3377-S SNP C -> T AC=1;AN=184;BQB=0.791079;DP=2567;DP4=994,1439,1,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.1602e-05;MQSB=0.728908;RPB=0.912256;SGB=10.6662;VDB=0.199373;EFF=UTR_5_PRIME(MODIFIER||110||312|LOC_Os02g55160|protein_coding|CODING|LOC_Os02g55160.1|1|1) W591-4-1.SNP.2:33814991 chr02:033814991 0 W/33814991-33814991 W591-4-1 Single Base Substitution A-G INTRON HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN-227.SNP.2:33815671 chr02:033815671 0 W/33815671-33815671 FN-227 Single Base Substitution A-T INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2488.SNP.2:33823068 chr02:033823068 0 W/33823068-33823068 FN2488 SNP A -> G AC=2;AN=200;BQB=0.856189;DP=5112;DP4=2323,2512,14,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.02186e-17;MQSB=0.607813;RPB=0.129806;SGB=115.978;VDB=0.183605;EFF=INTRON(MODIFIER||||236|LOC_Os02g55220|protein_coding|CODING|LOC_Os02g55220.1|1|1) FN4070-S.SNP.2:33825071 chr02:033825071 0 W/33825071-33825071 FN4070-S SNP T -> A AC=2;AN=182;BQB=0.978375;DP=2620;DP4=1230,1310,23,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.33441e-25;MQSB=0.993919;RPB=0.449582;SGB=201.02;VDB=0.785633;EFF=INTRON(MODIFIER||||367|LOC_Os02g55230|protein_coding|CODING|LOC_Os02g55230.1|6|1) FN410-S.SNP.2:33832535 chr02:033832535 0 W/33832535-33832535 FN410-S Single Base Substitution A-G INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3921-S.SNP.2:33839282 chr02:033839282 0 W/33839282-33839282 FN3921-S SNP C -> G AC=1;AN=158;BQB=0.842617;DP=2209;DP4=1052,1077,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.77569e-08;MQSB=0.994224;RPB=0.714807;SGB=37.4429;VDB=0.273047;EFF=INTRON(MODIFIER||||521|LOC_Os02g55260|protein_coding|CODING|LOC_Os02g55260.1|9|1),INTRON(MODIFIER||||521|LOC_Os02g55260|protein_coding|CODING|LOC_Os02g55260.2|9|1) FN619-S.SNP.2:33849053 chr02:033849053 0 W/33849053-33849053 FN619-S Single Base Substitution C-T INTERGENIC HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN1525-S.SNP.2:33850366 chr02:033850366 0 W/33850366-33850366 FN1525-S Single Base Substitution A-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2420.SNP.2:33853945 chr02:033853945 0 W/33853945-33853945 FN2420 SNP C -> T AC=2;AN=200;BQB=0.987599;DP=4086;DP4=2026,1805,31,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25078e-19;MQSB=0.869748;RPB=0.460242;SGB=3.22936;VDB=0.692193;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.2:33854975 chr02:033854975 0 W/33854975-33854975 FN4136-S SNP C -> T AC=1;AN=170;BQB=0.462268;DP=2691;DP4=1296,1333,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.53088e-05;MQSB=0.974974;RPB=0.983903;SGB=-2.88077;VDB=0.520343;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L210|295|LOC_Os02g55300|protein_coding|CODING|LOC_Os02g55300.1|1|1) FN3751-S.SNP.2:33867882 chr02:033867882 0 W/33867882-33867882 FN3751-S SNP A -> T AC=2;AN=190;BQB=0.866833;DP=2578;DP4=1203,1221,17,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.72663e-13;MQSB=0.866327;RPB=0.990127;SGB=49.1985;VDB=0.620203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.2:33873475 chr02:033873475 0 W/33873475-33873475 FN3538-S SNP C -> T AC=1;AN=188;BQB=0.641246;DP=2785;DP4=1479,1245,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40442e-07;MQSB=0.959275;RPB=0.983141;SGB=28.8977;VDB=0.348282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.2:33873476 chr02:033873476 0 W/33873476-33873476 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.693243;DP=2784;DP4=1453,1240,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.5294e-07;MQSB=0.986682;RPB=0.953265;SGB=28.8977;VDB=0.335038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.2:33873477 chr02:033873477 0 W/33873477-33873477 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.993408;DP=2778;DP4=1480,1229,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4752e-07;MQSB=0.96632;RPB=0.987376;SGB=39.8925;VDB=0.2142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.2:33875706 chr02:033875706 0 W/33875706-33875706 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.507465;DP=2691;DP4=1838,827,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.08513e-08;MQSB=0.844893;RPB=0.950053;SGB=8.48314;VDB=0.297209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.2:33882166 chr02:033882166 0 W/33882166-33882166 FN3434-S SNP C -> T AC=1;AN=184;BQB=0.993252;DP=2916;DP4=1298,1495,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000342936;MQB=2.51014e-09;MQSB=0.924704;RPB=0.964995;SGB=39.2697;VDB=0.191902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.2:33883588 chr02:033883588 0 W/33883588-33883588 FN2621-S SNP T -> C AC=2;AN=200;BQB=0.983516;DP=4998;DP4=2242,2540,21,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.53787e-27;MQSB=0.998186;RPB=0.962259;SGB=233.866;VDB=0.987764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.2:33886803 chr02:033886803 0 W/33886803-33886803 FN2617-S SNP T -> A AC=2;AN=198;BQB=0.745744;DP=4254;DP4=1769,2228,15,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.39221e-26;MQSB=1;RPB=0.765995;SGB=55.6079;VDB=0.534676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S1326C|1488|LOC_Os02g55340|protein_coding|CODING|LOC_Os02g55340.1|10|1) FN3404-S.SNP.2:33892551 chr02:033892551 0 W/33892551-33892551 FN3404-S SNP T -> C AC=2;AN=184;BQB=0.999997;DP=2513;DP4=1313,1097,6,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.89129e-07;MQSB=0.987858;RPB=0.681509;SGB=25.1826;VDB=0.356497;EFF=INTRON(MODIFIER||||1488|LOC_Os02g55340|protein_coding|CODING|LOC_Os02g55340.1|3|1) FN971-S.SNP.2:33892551 chr02:033892551 0 W/33892551-33892551 FN971-S Single Base Substitution T-C INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2373.SNP.2:33893425 chr02:033893425 0 W/33893425-33893425 FN2373 SNP A -> T AC=2;AN=192;BQB=0.967054;DP=4868;DP4=2222,2179,17,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.1314e-19;MQSB=0.583417;RPB=0.986121;SGB=-1.78867;VDB=0.150955;EFF=SPLICE_SITE_DONOR(HIGH||||1488|LOC_Os02g55340|protein_coding|CODING|LOC_Os02g55340.1|1|1),INTRON(MODIFIER||||1488|LOC_Os02g55340|protein_coding|CODING|LOC_Os02g55340.1|1|1);LOF=(LOC_Os02g55340|LOC_Os02g55340|1|1.00) FN3415-S.SNP.2:33902535 chr02:033902535 0 W/33902535-33902535 FN3415-S SNP G -> A AC=1;AN=184;BQB=0.889483;DP=2834;DP4=1387,1355,21,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00882145;MQB=4.00923e-12;MQSB=0.0113682;RPB=0.00296799;SGB=-276.187;VDB=0.821127;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W516*|1597|LOC_Os02g55350|protein_coding|CODING|LOC_Os02g55350.1|2|1);LOF=(LOC_Os02g55350|LOC_Os02g55350|1|1.00);NMD=(LOC_Os02g55350|LOC_Os02g55350|1|1.00) FN-139.SNP.2:33910998 chr02:033910998 0 W/33910998-33910998 FN-139 Single Base Substitution A-T INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN4105-S.SNP.2:33912130 chr02:033912130 0 W/33912130-33912130 FN4105-S SNP G -> A AC=2;AN=182;BQB=0.997646;DP=2562;DP4=1204,1268,7,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.35095e-12;MQSB=0.999203;RPB=0.996539;SGB=89.2199;VDB=0.746645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.2:33912844 chr02:033912844 0 W/33912844-33912844 FN2332 SNP C -> T AC=1;AN=192;BQB=0.292362;DP=4492;DP4=2105,2145,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.3413e-08;MQSB=0.739761;RPB=0.910667;SGB=61.1661;VDB=0.832601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.2:33914192 chr02:033914192 0 W/33914192-33914192 FN4123-S SNP A -> T AC=1;AN=182;BQB=0.932;DP=3313;DP4=1633,1588,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.48321e-08;MQSB=0.949123;RPB=0.575344;SGB=46.1603;VDB=0.688462;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K16*|51|LOC_Os02g55370|protein_coding|CODING|LOC_Os02g55370.1|2|1);LOF=(LOC_Os02g55370|LOC_Os02g55370|1|1.00);NMD=(LOC_Os02g55370|LOC_Os02g55370|1|1.00) FN3663-S.SNP.2:33919624 chr02:033919624 0 W/33919624-33919624 FN3663-S SNP G -> A AC=1;AN=190;BQB=0.999492;DP=3382;DP4=1856,1335,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99998e-05;MQSB=0.819662;RPB=0.991534;SGB=10.8904;VDB=0.272308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.2:33921344 chr02:033921344 0 W/33921344-33921344 FN2492 SNP C -> T AC=1;AN=200;BQB=0.999941;DP=5349;DP4=3026,1945,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000186951;MQB=9.81938e-07;MQSB=0.979132;RPB=0.906699;SGB=40.2696;VDB=0.729579;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.2:33928371 chr02:033928371 0 W/33928371-33928371 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN498-S.SNP.2:33933264 chr02:033933264 0 W/33933264-33933264 FN498-S Single Base Substitution C-A STOP_GAINED HET LOC_Os02g55400 ATPase 8, plasma membrane-type, putative, expressed SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1023-S.SNP.2:33935089 chr02:033935089 0 W/33935089-33935089 FN1023-S Single Base Substitution C-G INTRON HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. W591-4-1.SNP.2:33935597 chr02:033935597 0 W/33935597-33935597 W591-4-1 Single Base Substitution C-T INTRON HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. W426-1-1.SNP.2:33936162 chr02:033936162 0 W/33936162-33936162 W426-1-1 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN931-S.SNP.2:33942037 chr02:033942037 0 W/33942037-33942037 FN931-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN938-S.SNP.2:33951899 chr02:033951899 0 W/33951899-33951899 FN938-S Single Base Substitution G-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-192.SNP.2:33952370 chr02:033952370 0 W/33952370-33952370 FN-192 Single Base Substitution G-C INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2136-S.SNP.2:33962623 chr02:033962623 0 W/33962623-33962623 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.763706;DP=4528;DP4=2298,2177,20,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.26934e-12;MQSB=0.990118;RPB=0.897473;SGB=-82.1908;VDB=0.654021;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.2:33964252 chr02:033964252 0 W/33964252-33964252 FN2553-S SNP T -> G AC=1;AN=198;BQB=0.964542;DP=4508;DP4=2112,2166,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09708e-07;MQSB=0.456443;RPB=0.0206861;SGB=26.7492;VDB=0.0446866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.2:33964872 chr02:033964872 0 W/33964872-33964872 FN3673-S SNP T -> A AC=1;AN=190;BQB=0.928899;DP=2365;DP4=565,1697,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34256e-06;MQSB=0.493993;RPB=0.38512;SGB=39.9877;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.2:33965025 chr02:033965025 0 W/33965025-33965025 FN2461 SNP T -> C AC=1;AN=200;BQB=0.976331;DP=2596;DP4=1761,560,14,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84625e-08;MQSB=0.741587;RPB=0.394493;SGB=29.4849;VDB=0.343005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.2:33968281 chr02:033968281 0 W/33968281-33968281 FN3905-S SNP G -> A AC=1;AN=158;BQB=0.574878;DP=2590;DP4=1232,1259,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.41042e-08;MQSB=0.987333;RPB=0.773425;SGB=4.82504;VDB=0.838942;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.2:33971205 chr02:033971205 0 W/33971205-33971205 FN3983-S SNP G -> A AC=2;AN=168;BQB=0.905854;DP=1687;DP4=865,705,5,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87806e-05;MQSB=0.966063;RPB=0.971863;SGB=27.8864;VDB=0.5837;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.2:33978303 chr02:033978303 0 W/33978303-33978303 FN3545-S SNP C -> T AC=2;AN=188;BQB=0.631485;DP=3038;DP4=1331,1613,8,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3308e-08;MQSB=0.975095;RPB=0.152276;SGB=80.782;VDB=0.183991;EFF=UTR_3_PRIME(MODIFIER||329||209|LOC_Os02g55480|protein_coding|CODING|LOC_Os02g55480.2|4|1),UTR_3_PRIME(MODIFIER||329||210|LOC_Os02g55480|protein_coding|CODING|LOC_Os02g55480.1|4|1) FN1499-S.SNP.2:33981297 chr02:033981297 0 W/33981297-33981297 FN1499-S Single Base Substitution C-G INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. W42-1-3S-1.SNP.2:33989338 chr02:033989338 0 W/33989338-33989338 W42-1-3S-1 Single Base Substitution T-A INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2454.SNP.2:33994853 chr02:033994853 0 W/33994853-33994853 FN2454 SNP G -> A AC=1;AN=200;BQB=0.613068;DP=5004;DP4=2527,2244,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.39417e-08;MQSB=0.985335;RPB=0.317233;SGB=49.6594;VDB=0.0106462;EFF=INTRON(MODIFIER||||523|LOC_Os02g55520|protein_coding|CODING|LOC_Os02g55520.1|2|1),INTRON(MODIFIER||||515|LOC_Os02g55520|protein_coding|CODING|LOC_Os02g55520.2|2|1) FN1464-S.SNP.2:33999561 chr02:033999561 0 W/33999561-33999561 FN1464-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3991-S.SNP.2:34009567 chr02:034009567 0 W/34009567-34009567 FN3991-S SNP C -> T AC=1;AN=168;BQB=0.653969;DP=2548;DP4=1174,1271,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.33352e-06;MQSB=0.822823;RPB=0.0953608;SGB=24.6155;VDB=0.384209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E175K|281|LOC_Os02g55540|protein_coding|CODING|LOC_Os02g55540.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E175K|281|LOC_Os02g55540|protein_coding|CODING|LOC_Os02g55540.2|1|1) FN2657-S.SNP.2:34016366 chr02:034016366 0 W/34016366-34016366 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.940155;DP=5203;DP4=2261,2693,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21966e-15;MQSB=0.991329;RPB=0.831128;SGB=76.3213;VDB=0.29452;EFF=UTR_5_PRIME(MODIFIER||2||207|LOC_Os02g55550|protein_coding|CODING|LOC_Os02g55550.1|2|1) FN1333-S.SNP.2:34019573 chr02:034019573 0 W/34019573-34019573 FN1333-S Single Base Substitution G-A INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN-167.SNP.2:34021908 chr02:034021908 0 W/34021908-34021908 FN-167 Single Base Substitution A-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1075-S.SNP.2:34022808 chr02:034022808 0 W/34022808-34022808 FN1075-S Single Base Substitution G-T INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2164-S.SNP.2:34025238 chr02:034025238 0 W/34025238-34025238 FN2164-S SNP G -> A AC=1;AN=168;BQB=0.109625;DP=3996;DP4=1958,1989,14,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.39068e-11;MQSB=0.999994;RPB=0.877284;SGB=-140.764;VDB=0.631675;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.2:34034073 chr02:034034073 0 W/34034073-34034073 FN_N2-29a-1 Single Base Substitution G-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3662-S.SNP.2:34035569 chr02:034035569 0 W/34035569-34035569 FN3662-S SNP C -> T AC=1;AN=190;BQB=0.726947;DP=2997;DP4=1379,1522,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.23183e-08;MQSB=0.990033;RPB=0.319357;SGB=49.0954;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.2:34035613 chr02:034035613 0 W/34035613-34035613 FN3662-S SNP T -> A AC=1;AN=190;BQB=0.644676;DP=3142;DP4=1413,1555,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.86442e-08;MQSB=0.933745;RPB=0.98067;SGB=2.55724;VDB=0.502073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.2:34049971 chr02:034049971 0 W/34049971-34049971 FN1512-S Single Base Substitution A-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2701-S.SNP.2:34057511 chr02:034057511 0 W/34057511-34057511 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.851278;DP=5057;DP4=2608,2174,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16528e-12;MQSB=0.854831;RPB=0.230922;SGB=-8.87404;VDB=0.870383;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.2:34060845 chr02:034060845 0 W/34060845-34060845 FN2358 SNP G -> A AC=1;AN=192;BQB=0.831332;DP=4753;DP4=1996,2450,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.5502e-10;MQSB=0.0189801;RPB=0.813836;SGB=7.3548;VDB=0.87711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.2:34064845 chr02:034064845 0 W/34064845-34064845 FN1200-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1040-S.SNP.2:34071712 chr02:034071712 0 W/34071712-34071712 FN1040-S Single Base Substitution T-A INTRON HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1040-S.SNP.2:34071713 chr02:034071713 0 W/34071713-34071713 FN1040-S Single Base Substitution T-A INTRON HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1123-S.SNP.2:34074269 chr02:034074269 0 W/34074269-34074269 FN1123-S Single Base Substitution G-A INTRON HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1602-S.SNP.2:34076018 chr02:034076018 0 W/34076018-34076018 FN1602-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3530-S.SNP.2:34079800 chr02:034079800 0 W/34079800-34079800 FN3530-S SNP A -> G AC=1;AN=188;BQB=0.838325;DP=2805;DP4=1269,1429,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.52845e-08;MQSB=0.991012;RPB=0.0830064;SGB=67.1521;VDB=0.0306829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.2:34081652 chr02:034081652 0 W/34081652-34081652 FN1104-S Single Base Substitution A-G INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN836-S.SNP.2:34168419 chr02:034168419 0 W/34168419-34168419 FN836-S Single Base Substitution C-A INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3762-S.SNP.2:34170319 chr02:034170319 0 W/34170319-34170319 FN3762-S SNP A -> G AC=1;AN=190;BQB=0.997038;DP=2739;DP4=1249,1382,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41452e-07;MQSB=0.999083;RPB=0.451002;SGB=53.6492;VDB=0.566701;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.2:34176192 chr02:034176192 0 W/34176192-34176192 FN4166-S SNP G -> C AC=2;AN=170;BQB=0.936022;DP=2594;DP4=1303,1215,10,2;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.12051e-08;MQSB=0.792497;RPB=0.952745;SGB=47.8722;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.2:34179652 chr02:034179652 0 W/34179652-34179652 FN2483 SNP G -> A AC=1;AN=200;BQB=0.691296;DP=5320;DP4=2662,2422,12,8;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.193797;MQB=0.354729;MQSB=1.72326e-21;RPB=0.840398;SGB=61.9006;VDB=0.342364;EFF=INTRON(MODIFIER||||558|LOC_Os02g55830|protein_coding|CODING|LOC_Os02g55830.1|1|1) FN_N1-130-1.SNP.2:34184356 chr02:034184356 0 W/34184356-34184356 FN_N1-130-1 Single Base Substitution G-A Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3838-S.SNP.2:34186144 chr02:034186144 0 W/34186144-34186144 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.992592;DP=3173;DP4=1588,1445,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00283643;MQB=6.50469e-06;MQSB=0.686963;RPB=0.272125;SGB=21.1058;VDB=0.337067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.2:34188773 chr02:034188773 0 W/34188773-34188773 FN2594-S SNP A -> G AC=2;AN=198;BQB=0.714035;DP=3748;DP4=1719,1853,20,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000800427;MQB=6.01139e-21;MQSB=0.0993121;RPB=0.192945;SGB=83.8419;VDB=0.562723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.2:34194291 chr02:034194291 0 W/34194291-34194291 FN1333-S Single Base Substitution G-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3365-S.SNP.2:34199850 chr02:034199850 0 W/34199850-34199850 FN3365-S SNP C -> G AC=1;AN=184;BQB=0.433339;DP=2592;DP4=1039,1445,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.52363e-06;MQSB=0.921894;RPB=0.996269;SGB=39.699;VDB=0.589022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D42E|541|LOC_Os02g55870|protein_coding|CODING|LOC_Os02g55870.1|1|1) FN3365-S.SNP.2:34199851 chr02:034199851 0 W/34199851-34199851 FN3365-S SNP G -> A AC=1;AN=184;BQB=0.8328;DP=2606;DP4=1041,1477,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.05251e-06;MQSB=0.949914;RPB=0.97736;SGB=39.699;VDB=0.600763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A43T|541|LOC_Os02g55870|protein_coding|CODING|LOC_Os02g55870.1|1|1) FN-133.SNP.2:34205868 chr02:034205868 0 W/34205868-34205868 FN-133 Single Base Substitution C-A INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN3880-S.SNP.2:34209999 chr02:034209999 0 W/34209999-34209999 FN3880-S SNP T -> A AC=2;AN=158;BQB=0.421394;DP=2990;DP4=1392,1420,23,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.54501e-23;MQSB=0.966096;RPB=0.999998;SGB=97.2716;VDB=0.93025;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.2:34212409 chr02:034212409 0 W/34212409-34212409 FN2754-S SNP G -> T AC=1;AN=200;BQB=0.984048;DP=4911;DP4=2389,2230,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55512e-05;MQSB=0.806362;RPB=0.579648;SGB=31.2392;VDB=0.471462;EFF=INTRON(MODIFIER||||762|LOC_Os02g55890|protein_coding|CODING|LOC_Os02g55890.1|3|1) FN2387.SNP.2:34213355 chr02:034213355 0 W/34213355-34213355 FN2387 SNP G -> C AC=1;AN=192;BQB=0.231726;DP=4543;DP4=2303,1884,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.26899e-17;MQSB=0.896425;RPB=0.401355;SGB=62.2505;VDB=0.518574;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R166G|762|LOC_Os02g55890|protein_coding|CODING|LOC_Os02g55890.1|2|1) FN2583-S.SNP.2:34215943 chr02:034215943 0 W/34215943-34215943 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.940201;DP=4684;DP4=2318,2118,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19908e-11;MQSB=0.95763;RPB=0.494334;SGB=9.48993;VDB=0.493575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3546-S.SNP.2:34218647 chr02:034218647 0 W/34218647-34218647 FN3546-S SNP G -> C AC=2;AN=188;BQB=0.79549;DP=3258;DP4=1534,1589,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.65961e-11;MQSB=0.973525;RPB=0.460782;SGB=64.3306;VDB=0.471991;EFF=INTRON(MODIFIER||||275|LOC_Os02g55900|protein_coding|CODING|LOC_Os02g55900.1|5|1) FN1534-S.SNP.2:34222486 chr02:034222486 0 W/34222486-34222486 FN1534-S Single Base Substitution G-T INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1534-S.SNP.2:34222487 chr02:034222487 0 W/34222487-34222487 FN1534-S Single Base Substitution T-C INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1057-S.SNP.2:34228542 chr02:034228542 0 W/34228542-34228542 FN1057-S Single Base Substitution G-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-379.SNP.2:34234385 chr02:034234385 0 W/34234385-34234385 FN-379 Single Base Substitution C-A INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN2437.SNP.2:34234537 chr02:034234537 0 W/34234537-34234537 FN2437 SNP G -> A AC=1;AN=200;BQB=0.831658;DP=5100;DP4=2761,1999,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79619e-13;MQSB=0.876331;RPB=0.953288;SGB=87.1368;VDB=0.73247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.2:34237311 chr02:034237311 0 W/34237311-34237311 FN2589-S SNP A -> T AC=1;AN=198;BQB=0.495529;DP=3898;DP4=1666,1957,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.18945e-05;MQSB=0.979702;RPB=0.888244;SGB=-0.221308;VDB=0.114178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.2:34259468 chr02:034259468 0 W/34259468-34259468 FN3389-S SNP T -> A AC=1;AN=184;BQB=0.979499;DP=2974;DP4=1319,1533,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.33307e-12;MQSB=0.800535;RPB=0.381059;SGB=56.8786;VDB=0.586143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V373E|569|LOC_Os02g55970|protein_coding|CODING|LOC_Os02g55970.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V373E|569|LOC_Os02g55970|protein_coding|CODING|LOC_Os02g55970.2|14|1) FN550-S.SNP.2:34273654 chr02:034273654 0 W/34273654-34273654 FN550-S Single Base Substitution G-T INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1233-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN1233-S Single Base Substitution C-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1754-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN1754-S SNP C -> T AC=2;AN=188;BQB=0.684248;DP=3914;DP4=2052,1811,25,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.54643e-17;MQSB=0.64004;RPB=0.89635;SGB=-46.9554;VDB=0.625084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN2323 SNP C -> T AC=1;AN=192;BQB=0.940767;DP=5107;DP4=2683,2085,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.16545e-11;MQSB=0.644302;RPB=0.230402;SGB=78.9878;VDB=0.809841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.979929;DP=2934;DP4=1663,1176,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20524e-07;MQSB=0.153304;RPB=0.957164;SGB=15.7097;VDB=0.880399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN3500-S SNP C -> T AC=2;AN=188;BQB=0.949136;DP=2840;DP4=1621,1103,23,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.74367e-16;MQSB=0.161852;RPB=0.490956;SGB=139.845;VDB=0.00119721;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.744204;DP=2620;DP4=1436,1043,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12753e-10;MQSB=0.200994;RPB=0.689569;SGB=36.7696;VDB=0.425731;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN4104-S SNP C -> T AC=2;AN=182;BQB=0.987002;DP=3033;DP4=1723,1230,9,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.12225e-08;MQSB=0.319218;RPB=0.999984;SGB=62.1548;VDB=0.916654;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.2:34282939 chr02:034282939 0 W/34282939-34282939 FN740-S Single Base Substitution C-T INTERGENIC HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN1217-S.SNP.2:34293079 chr02:034293079 0 W/34293079-34293079 FN1217-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2557-S.SNP.2:34303092 chr02:034303092 0 W/34303092-34303092 FN2557-S SNP A -> G AC=1;AN=198;BQB=0.854744;DP=4138;DP4=2041,1945,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.34329e-05;MQSB=0.997498;RPB=0.591963;SGB=18.5788;VDB=0.244443;EFF=INTRON(MODIFIER||||487|LOC_Os02g56040|protein_coding|CODING|LOC_Os02g56040.1|7|1) FN3958-S.SNP.2:34306362 chr02:034306362 0 W/34306362-34306362 FN3958-S SNP A -> G AC=1;AN=168;BQB=0.909813;DP=2433;DP4=1172,1135,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.21624e-09;MQSB=0.901051;RPB=0.725571;SGB=27.0464;VDB=0.263369;EFF=INTRON(MODIFIER||||487|LOC_Os02g56040|protein_coding|CODING|LOC_Os02g56040.1|1|1) FN3681-S.SNP.2:34312559 chr02:034312559 0 W/34312559-34312559 FN3681-S SNP C -> T AC=2;AN=190;BQB=0.996063;DP=1743;DP4=725,956,11,8;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000573723;MQB=5.24309e-06;MQSB=0.927117;RPB=0.831167;SGB=80.9724;VDB=0.981926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.2:34317354 chr02:034317354 0 W/34317354-34317354 FN3752-S SNP T -> C AC=1;AN=190;BQB=0.882002;DP=2937;DP4=1481,1229,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.152877;MQB=0.813883;MQSB=0.00199368;RPB=0.419394;SGB=-61.7653;VDB=0.888695;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P1489|1853|LOC_Os02g56060|protein_coding|CODING|LOC_Os02g56060.1|4|1) FN1097-S.SNP.2:34320610 chr02:034320610 0 W/34320610-34320610 FN1097-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g56070 retrotransposon protein, putative, unclassified, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN_776-5-1.SNP.2:34333613 chr02:034333613 0 W/34333613-34333613 FN_776-5-1 Single Base Substitution C-T Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN734-S.SNP.2:34334153 chr02:034334153 0 W/34334153-34334153 FN734-S Single Base Substitution G-A INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1286-S.SNP.2:34342377 chr02:034342377 0 W/34342377-34342377 FN1286-S Single Base Substitution G-A STOP_GAINED HET LOC_Os02g56110 AP-1 complex subunit gamma-1, putative, expressed SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3436-S.SNP.2:34342986 chr02:034342986 0 W/34342986-34342986 FN3436-S SNP C -> T AC=2;AN=184;BQB=0.855726;DP=2614;DP4=1224,1300,12,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.93634e-18;MQSB=0.999195;RPB=0.456543;SGB=109.705;VDB=0.0224726;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L178|889|LOC_Os02g56110|protein_coding|CODING|LOC_Os02g56110.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L178|888|LOC_Os02g56110|protein_coding|CODING|LOC_Os02g56110.2|4|1) FN1047-S.SNP.2:34346557 chr02:034346557 0 W/34346557-34346557 FN1047-S Single Base Substitution C-T INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2673-S.SNP.2:34363712 chr02:034363712 0 W/34363712-34363712 FN2673-S SNP C -> A AC=1;AN=200;BQB=0.504213;DP=5027;DP4=2459,2343,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.84865e-18;MQSB=0.954827;RPB=0.746842;SGB=132.552;VDB=0.836585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G355V|463|LOC_Os02g56170|protein_coding|CODING|LOC_Os02g56170.1|2|1) FN3422-S.SNP.2:34367351 chr02:034367351 0 W/34367351-34367351 FN3422-S SNP G -> T AC=1;AN=184;BQB=0.921637;DP=3114;DP4=1852,1127,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.01504e-06;MQSB=0.979709;RPB=0.873768;SGB=21.6609;VDB=0.375147;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.2:34383037 chr02:034383037 0 W/34383037-34383037 FN414-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2355.SNP.2:34392673 chr02:034392673 0 W/34392673-34392673 FN2355 SNP C -> T AC=2;AN=192;BQB=0.844897;DP=5032;DP4=2340,2324,34,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.40718e-32;MQSB=0.652706;RPB=0.888227;SGB=159.696;VDB=0.942279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.2:34394048 chr02:034394048 0 W/34394048-34394048 FN3773-S SNP A -> C AC=1;AN=190;BQB=0.791597;DP=3922;DP4=1817,1902,8,21;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.134625;MQB=0.441611;MQSB=0;RPB=0.991841;SGB=92.9626;VDB=0.289709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tGt|F22C|80|LOC_Os02g56240|protein_coding|CODING|LOC_Os02g56240.1|1|1) FN2428.SNP.2:34396650 chr02:034396650 0 W/34396650-34396650 FN2428 SNP C -> T AC=1;AN=200;BQB=0.0853711;DP=5648;DP4=2471,2775,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8433e-09;MQSB=0.0960812;RPB=0.733149;SGB=-36.1052;VDB=0.497117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.2:34396684 chr02:034396684 0 W/34396684-34396684 FN2440 SNP C -> A AC=1;AN=200;BQB=0.278597;DP=5505;DP4=2469,2513,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4843e-12;MQSB=0.119989;RPB=0.91138;SGB=25.5416;VDB=0.115125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.2:34397171 chr02:034397171 0 W/34397171-34397171 FN2266-S SNP A -> C AC=2;AN=190;BQB=0.270971;DP=4682;DP4=2097,2065,23,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.75546e-14;MQSB=0.529682;RPB=0.69954;SGB=-43.0163;VDB=0.833871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.2:34397341 chr02:034397341 0 W/34397341-34397341 FN1470-S Single Base Substitution T-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2438.SNP.2:34406693 chr02:034406693 0 W/34406693-34406693 FN2438 SNP C -> T AC=2;AN=200;BQB=0.985312;DP=4080;DP4=2056,1706,20,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000245098;MQB=9.40497e-17;MQSB=0.652816;RPB=0.722579;SGB=134.004;VDB=0.732979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.2:34406961 chr02:034406961 0 W/34406961-34406961 FN2634-S SNP C -> T AC=1;AN=200;BQB=0.935679;DP=4709;DP4=2406,2021,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.92789e-17;MQSB=0.795247;RPB=0.991858;SGB=127.947;VDB=0.338037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.2:34410052 chr02:034410052 0 W/34410052-34410052 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.701726;DP=4483;DP4=2458,1556,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.95464e-06;MQSB=0.894311;RPB=0.496513;SGB=-1.81641;VDB=0.52194;EFF=INTRON(MODIFIER||||418|LOC_Os02g56250|protein_coding|CODING|LOC_Os02g56250.1|1|1) FN2445.SNP.2:34410374 chr02:034410374 0 W/34410374-34410374 FN2445 SNP T -> C AC=1;AN=200;BQB=0.999351;DP=4376;DP4=1771,2380,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.29403e-08;MQSB=0.77067;RPB=0.877292;SGB=36.6644;VDB=0.137402;EFF=INTRON(MODIFIER||||418|LOC_Os02g56250|protein_coding|CODING|LOC_Os02g56250.1|1|1) FN909-S.SNP.2:34410970 chr02:034410970 0 W/34410970-34410970 FN909-S Single Base Substitution C-G INTRON HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2784-S.SNP.2:34414193 chr02:034414193 0 W/34414193-34414193 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.845958;DP=4206;DP4=2236,1757,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.45399e-16;MQSB=0.914414;RPB=0.686756;SGB=97.671;VDB=0.790722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.2:34418478 chr02:034418478 0 W/34418478-34418478 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3951-S.SNP.2:34419093 chr02:034419093 0 W/34419093-34419093 FN3951-S SNP G -> T AC=1;AN=168;BQB=0.997468;DP=2442;DP4=1058,1210,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.09021e-09;MQSB=0.983709;RPB=0.537148;SGB=48.4712;VDB=0.196083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.2:34429148 chr02:034429148 0 W/34429148-34429148 FN1345-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os02g56270 ENTH domain containing protein, expressed SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3840-S.SNP.2:34439844 chr02:034439844 0 W/34439844-34439844 FN3840-S SNP A -> C AC=1;AN=190;BQB=0.919711;DP=2703;DP4=1303,1261,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.78464e-08;MQSB=0.820994;RPB=0.0568349;SGB=23.6597;VDB=0.250301;EFF=UTR_3_PRIME(MODIFIER||395||723|LOC_Os02g56280|protein_coding|CODING|LOC_Os02g56280.1|2|1) FN4174-S.SNP.2:34444307 chr02:034444307 0 W/34444307-34444307 FN4174-S SNP T -> C AC=1;AN=170;BQB=0.702832;DP=2444;DP4=1248,1125,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.44671e-06;MQSB=0.960524;RPB=0.103422;SGB=34.5445;VDB=0.142062;EFF=UTR_5_PRIME(MODIFIER||226||723|LOC_Os02g56280|protein_coding|CODING|LOC_Os02g56280.1|1|1) FN3947-S.SNP.2:34444746 chr02:034444746 0 W/34444746-34444746 FN3947-S SNP A -> G AC=1;AN=168;BQB=0.0476747;DP=2725;DP4=1334,1009,12,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.4702e-10;MQSB=0.510276;RPB=0.689991;SGB=-113.477;VDB=0.51043;EFF=UTR_5_PRIME(MODIFIER||665||723|LOC_Os02g56280|protein_coding|CODING|LOC_Os02g56280.1|1|1) FN3627-S.SNP.2:34460281 chr02:034460281 0 W/34460281-34460281 FN3627-S SNP A -> G AC=1;AN=190;BQB=0.995352;DP=2879;DP4=1366,1374,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50121e-07;MQSB=0.962295;RPB=0.95156;SGB=18.552;VDB=0.346573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-29.SNP.2:34461224 chr02:034461224 0 W/34461224-34461224 FN-29 Single Base Substitution C-A INTERGENIC Homo SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN3434-S.SNP.2:34464326 chr02:034464326 0 W/34464326-34464326 FN3434-S SNP C -> T AC=1;AN=184;BQB=0.233843;DP=2624;DP4=1185,1343,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81329e-08;MQSB=0.987276;RPB=0.767024;SGB=8.32411;VDB=0.423371;EFF=INTRON(MODIFIER||||481|LOC_Os02g56300|protein_coding|CODING|LOC_Os02g56300.1|4|1) FN2383.SNP.2:34469054 chr02:034469054 0 W/34469054-34469054 FN2383 SNP C -> G AC=1;AN=192;BQB=0.867945;DP=4477;DP4=2088,2211,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.70911e-11;MQSB=0.553226;RPB=0.471784;SGB=85.7252;VDB=0.9169;EFF=UTR_3_PRIME(MODIFIER||80||289|LOC_Os02g56310|protein_coding|CODING|LOC_Os02g56310.1|2|1) FN3559-S.SNP.2:34469466 chr02:034469466 0 W/34469466-34469466 FN3559-S SNP G -> A AC=2;AN=188;BQB=0.999732;DP=2893;DP4=1390,1408,19,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.45377e-17;MQSB=0.922675;RPB=0.255327;SGB=144.388;VDB=0.316251;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P220|289|LOC_Os02g56310|protein_coding|CODING|LOC_Os02g56310.1|1|1) FN2755-S.SNP.2:34470348 chr02:034470348 0 W/34470348-34470348 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.999915;DP=4927;DP4=2617,2064,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5918e-10;MQSB=0.908445;RPB=0.925089;SGB=32.0901;VDB=0.807779;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.2:34482657 chr02:034482657 0 W/34482657-34482657 FN-407 Single Base Substitution A-G INTRON HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.2:34482657 chr02:034482657 0 W/34482657-34482657 FN407-S Single Base Substitution A-G SPLICE_SITE_ACCEPTOR HET LOC_Os02g56320 glycogen synthase 1, putative, expressed SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1022-S.SNP.2:34487095 chr02:034487095 0 W/34487095-34487095 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN503-S.SNP.2:34488797 chr02:034488797 0 W/34488797-34488797 FN503-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g56340 expressed protein SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2602-S.SNP.2:34490501 chr02:034490501 0 W/34490501-34490501 FN2602-S SNP G -> T AC=1;AN=196;BQB=0.167843;DP=2510;DP4=1452,947,5,5;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=4.47329e-06;MQSB=0.359843;RPB=0.681565;SGB=11.1786;VDB=0.0138082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.2:34492717 chr02:034492717 0 W/34492717-34492717 FN2782-S SNP T -> G AC=1;AN=196;BQB=0.558211;DP=3964;DP4=1648,1943,16,19;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.91953e-19;MQSB=0.730439;RPB=0.999862;SGB=115.647;VDB=0.884556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E53A|104|LOC_Os02g56350|protein_coding|CODING|LOC_Os02g56350.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E574A|625|LOC_Os02g56354|protein_coding|CODING|LOC_Os02g56354.1|5|1) FN3416-S.SNP.2:34493683 chr02:034493683 0 W/34493683-34493683 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.898526;DP=3005;DP4=1209,1710,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53175e-06;MQSB=0.929941;RPB=0.683164;SGB=39.699;VDB=0.546508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G316E|625|LOC_Os02g56354|protein_coding|CODING|LOC_Os02g56354.1|4|1) FN3439-S.SNP.2:34508034 chr02:034508034 0 W/34508034-34508034 FN3439-S SNP G -> C AC=1;AN=184;BQB=0.860415;DP=2210;DP4=1148,985,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0104072;MQB=0.481176;MQSB=0.976272;RPB=0.988148;SGB=18.1394;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.2:34510835 chr02:034510835 0 W/34510835-34510835 FN4164-S SNP T -> A AC=1;AN=170;BQB=0.956708;DP=2514;DP4=1309,1145,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.69171e-09;MQSB=0.999536;RPB=0.737453;SGB=56.7575;VDB=0.202899;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K383*|756|LOC_Os02g56370|protein_coding|CODING|LOC_Os02g56370.1|3|1) FN4164-S.SNP.2:34510836 chr02:034510836 0 W/34510836-34510836 FN4164-S SNP G -> T AC=1;AN=170;BQB=0.989445;DP=2515;DP4=1320,1134,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.2047e-10;MQSB=0.999977;RPB=0.955294;SGB=41.7633;VDB=0.381728;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I382|756|LOC_Os02g56370|protein_coding|CODING|LOC_Os02g56370.1|3|1) FN2388.SNP.2:34523469 chr02:034523469 0 W/34523469-34523469 FN2388 SNP G -> C AC=1;AN=200;BQB=0.999145;DP=5091;DP4=2380,2412,10,12;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.322137;MQB=0.216057;MQSB=1.13104e-31;RPB=0.258428;SGB=95.7111;VDB=0.220405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G575R|1604|LOC_Os02g56390|protein_coding|CODING|LOC_Os02g56390.1|2|1) FN260-S.SNP.2:34527346 chr02:034527346 0 W/34527346-34527346 FN260-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os02g56390 transposon protein, putative, unclassified, expressed SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN2614-S.SNP.2:34535995 chr02:034535995 0 W/34535995-34535995 FN2614-S SNP T -> A AC=1;AN=196;BQB=0.974424;DP=4185;DP4=2199,1772,9,7;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.54519e-10;MQSB=0.997111;RPB=0.994156;SGB=47.3393;VDB=0.82696;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.2:34540423 chr02:034540423 0 W/34540423-34540423 FN753-S Single Base Substitution C-T INTRON HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN1140-S.SNP.2:34544961 chr02:034544961 0 W/34544961-34544961 FN1140-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3523-S.SNP.2:34547468 chr02:034547468 0 W/34547468-34547468 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.980967;DP=2809;DP4=1318,1407,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000355999;MQB=1.20049e-05;MQSB=0.702987;RPB=0.762515;SGB=35.3493;VDB=0.117332;EFF=INTRON(MODIFIER||||344|LOC_Os02g56420|protein_coding|CODING|LOC_Os02g56420.1|1|1) FN978-S.SNP.2:34547853 chr02:034547853 0 W/34547853-34547853 FN978-S Single Base Substitution T-C INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4182-S.SNP.2:34551898 chr02:034551898 0 W/34551898-34551898 FN4182-S SNP T -> C AC=1;AN=170;BQB=0.916779;DP=2503;DP4=1208,1210,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.48264e-10;MQSB=0.999191;RPB=0.737909;SGB=65.6427;VDB=0.13063;EFF=INTRON(MODIFIER||||344|LOC_Os02g56420|protein_coding|CODING|LOC_Os02g56420.1|1|1) FN-290.SNP.2:34553784 chr02:034553784 0 W/34553784-34553784 FN-290 Single Base Substitution C-G INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2386.SNP.2:34554251 chr02:034554251 0 W/34554251-34554251 FN2386 SNP A -> G AC=1;AN=192;BQB=0.995774;DP=4682;DP4=2242,2088,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.65572e-11;MQSB=0.770092;RPB=0.798229;SGB=68.2948;VDB=0.159471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.2:34555016 chr02:034555016 0 W/34555016-34555016 FN2785-S SNP A -> G AC=1;AN=196;BQB=0.799465;DP=3533;DP4=1639,1576,14,13;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0.000283046;MQB=3.76971e-14;MQSB=0.796777;RPB=0.954237;SGB=55.2955;VDB=0.127807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.2:34559129 chr02:034559129 0 W/34559129-34559129 FN3508-S SNP G -> A AC=2;AN=188;BQB=0.981165;DP=3060;DP4=1637,1332,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.20982e-12;MQSB=0.892948;RPB=0.26219;SGB=57.244;VDB=0.539981;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.2:34559129 chr02:034559129 0 W/34559129-34559129 W607-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2734-S.SNP.2:34560268 chr02:034560268 0 W/34560268-34560268 FN2734-S SNP G -> T AC=1;AN=200;BQB=0.764281;DP=4548;DP4=2430,1929,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.94681e-10;MQSB=0.761633;RPB=0.41713;SGB=63.4749;VDB=0.488567;EFF=UTR_5_PRIME(MODIFIER||325||115|LOC_Os02g56440|protein_coding|CODING|LOC_Os02g56440.1|1|1) FN-114.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN-114 Single Base Substitution A-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1288-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN1288-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1356-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN1356-S Single Base Substitution A-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3343-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN3343-S SNP A -> T AC=2;AN=184;BQB=0.784367;DP=2783;DP4=1071,1592,10,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.67373e-16;MQSB=0.836767;RPB=0.789296;SGB=121.091;VDB=0.531883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN3698-S SNP A -> T AC=2;AN=190;BQB=0.537885;DP=2484;DP4=1052,1307,6,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.19585e-08;MQSB=0.932733;RPB=0.99777;SGB=38.983;VDB=0.185307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN3862-S SNP A -> T AC=2;AN=158;BQB=0.892412;DP=2199;DP4=904,1189,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.44552e-12;MQSB=0.919405;RPB=0.999967;SGB=86.3921;VDB=0.945355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN3997-S SNP A -> T AC=1;AN=168;BQB=0.881889;DP=2424;DP4=972,1329,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27116e-07;MQSB=0.939314;RPB=0.928961;SGB=27.0464;VDB=0.0251638;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN467-S Single Base Substitution A-T INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN_N1-213-1.SNP.2:34566539 chr02:034566539 0 W/34566539-34566539 FN_N1-213-1 Single Base Substitution A-T Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2274-S.SNP.2:34569832 chr02:034569832 0 W/34569832-34569832 FN2274-S SNP G -> A AC=2;AN=190;BQB=0.0658447;DP=4889;DP4=2372,2190,38,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.62642e-35;MQSB=0.510019;RPB=0.905676;SGB=231.564;VDB=0.484387;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.2:34570884 chr02:034570884 0 W/34570884-34570884 FN516-S Single Base Substitution G-A INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN2756-S.SNP.2:34571220 chr02:034571220 0 W/34571220-34571220 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.943664;DP=4606;DP4=2139,2201,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.59052e-12;MQSB=0.985587;RPB=0.360537;SGB=58.2954;VDB=0.728384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E29K|119|LOC_Os02g56470|protein_coding|CODING|LOC_Os02g56470.1|1|1) FN723-S.SNP.2:34575480 chr02:034575480 0 W/34575480-34575480 FN723-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os02g56480 PB1 domain containing protein, expressed SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN3499-S.SNP.2:34580198 chr02:034580198 0 W/34580198-34580198 FN3499-S SNP G -> C AC=1;AN=188;BQB=0.959812;DP=2971;DP4=1186,1684,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.48294e-10;MQSB=0.999429;RPB=0.591259;SGB=67.1521;VDB=0.967219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.2:34586845 chr02:034586845 0 W/34586845-34586845 FN1075-S Single Base Substitution T-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3543-S.SNP.2:34589899 chr02:034589899 0 W/34589899-34589899 FN3543-S SNP C -> T AC=1;AN=188;BQB=0.950249;DP=2914;DP4=1114,1751,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.024022;MQB=0.609361;MQSB=1.8089e-12;RPB=0.243262;SGB=30.8063;VDB=0.316575;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.2:34599510 chr02:034599510 0 W/34599510-34599510 FN916-S Single Base Substitution T-C INTRON HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3390-S.SNP.2:34600665 chr02:034600665 0 W/34600665-34600665 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.545036;DP=2905;DP4=1547,1174,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.94426e-06;MQSB=0.277664;RPB=0.501375;SGB=13.188;VDB=0.625368;EFF=INTRON(MODIFIER||||582|LOC_Os02g56500|protein_coding|CODING|LOC_Os02g56500.1|9|1|WARNING_TRANSCRIPT_INCOMPLETE) FN2487.SNP.2:34613728 chr02:034613728 0 W/34613728-34613728 FN2487 SNP G -> A AC=1;AN=200;BQB=0.139129;DP=4880;DP4=2354,2266,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.2089e-15;MQSB=0.94784;RPB=0.123008;SGB=-8.26887;VDB=0.342708;EFF=INTRON(MODIFIER||||815|LOC_Os02g56510|protein_coding|CODING|LOC_Os02g56510.1|11|1) FN-228.SNP.2:34614182 chr02:034614182 0 W/34614182-34614182 FN-228 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2487.SNP.2:34620121 chr02:034620121 0 W/34620121-34620121 FN2487 SNP A -> G AC=1;AN=200;BQB=0.972427;DP=4869;DP4=2364,2202,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.33213e-16;MQSB=0.999725;RPB=0.846906;SGB=-5.84819;VDB=0.666921;EFF=UTR_3_PRIME(MODIFIER||95||633|LOC_Os02g56530|protein_coding|CODING|LOC_Os02g56530.1|2|1) FN442-S.SNP.2:34631648 chr02:034631648 0 W/34631648-34631648 FN442-S Single Base Substitution G-A INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1345-S.SNP.2:34633788 chr02:034633788 0 W/34633788-34633788 FN1345-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os02g56540 kinesin motor domain containing protein, putative, expressed SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN779-S.SNP.2:34634869 chr02:034634869 0 W/34634869-34634869 FN779-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN687-S.SNP.2:34639913 chr02:034639913 0 W/34639913-34639913 FN687-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g56550 ABC transporter, ATP-binding protein, putative, expressed SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3310-S.SNP.2:34643205 chr02:034643205 0 W/34643205-34643205 FN3310-S SNP A -> T AC=1;AN=184;BQB=0.979169;DP=3137;DP4=1692,1380,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22496e-08;MQSB=0.949957;RPB=0.713336;SGB=57.786;VDB=0.273871;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.2:34656187 chr02:034656187 0 W/34656187-34656187 FN830-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN4105-S.SNP.2:34666125 chr02:034666125 0 W/34666125-34666125 FN4105-S SNP T -> C AC=2;AN=182;BQB=0.996119;DP=2931;DP4=1587,1274,13,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.09184e-13;MQSB=0.99424;RPB=0.977326;SGB=93.7308;VDB=0.702192;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.2:34669383 chr02:034669383 0 W/34669383-34669383 FN2399 SNP A -> G AC=1;AN=200;BQB=0.886032;DP=5647;DP4=2915,2492,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.10498e-05;MQSB=0.753107;RPB=0.889625;SGB=29.4541;VDB=0.571148;EFF=INTRON(MODIFIER||||99|LOC_Os02g56590|protein_coding|CODING|LOC_Os02g56590.1|1|1) FN4063-S.SNP.2:34674640 chr02:034674640 0 W/34674640-34674640 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.229492;DP=2814;DP4=1432,1160,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.50991e-08;MQSB=0.990459;RPB=0.945373;SGB=-36.659;VDB=0.593111;EFF=INTRON(MODIFIER||||331|LOC_Os02g56600|protein_coding|CODING|LOC_Os02g56600.1|1|1) FN1217-S.SNP.2:34675256 chr02:034675256 0 W/34675256-34675256 FN1217-S Single Base Substitution T-C INTRON HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1717-S.SNP.2:34680453 chr02:034680453 0 W/34680453-34680453 FN1717-S SNP T -> A AC=1;AN=188;BQB=0.00455872;DP=3712;DP4=1992,1682,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19265e-06;MQSB=0.984798;RPB=0.999519;SGB=-37.3645;VDB=0.382592;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.2:34680935 chr02:034680935 0 W/34680935-34680935 FN413-S Single Base Substitution G-T INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2275-S.SNP.2:34686306 chr02:034686306 0 W/34686306-34686306 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.517431;DP=4904;DP4=2282,2143,17,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17617e-19;MQSB=0.87609;RPB=0.378711;SGB=-45.2469;VDB=0.391581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.2:34693287 chr02:034693287 0 W/34693287-34693287 FN2566-S SNP T -> C AC=1;AN=198;BQB=0.999899;DP=4410;DP4=1824,2354,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.01252e-07;MQSB=0.96593;RPB=0.977982;SGB=32.9588;VDB=0.173134;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.2:34696279 chr02:034696279 0 W/34696279-34696279 FN742-S Single Base Substitution C-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2486.SNP.2:34696903 chr02:034696903 0 W/34696903-34696903 FN2486 SNP C -> A AC=1;AN=200;BQB=0.75916;DP=4277;DP4=2015,2044,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.50064e-07;MQSB=0.988941;RPB=0.99673;SGB=63.4749;VDB=0.027109;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.2:34697555 chr02:034697555 0 W/34697555-34697555 FN1670-S SNP A -> G AC=1;AN=188;BQB=0.581733;DP=3167;DP4=1510,1628,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.32858e-05;MQSB=0.971514;RPB=0.280733;SGB=-16.0863;VDB=0.618744;EFF=INTRON(MODIFIER||||131|LOC_Os02g56620|protein_coding|CODING|LOC_Os02g56620.1|1|1) FN-366.SNP.2:34700937 chr02:034700937 0 W/34700937-34700937 FN-366 Single Base Substitution G-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1635-S.SNP.2:34710839 chr02:034710839 0 W/34710839-34710839 FN1635-S SNP A -> C AC=1;AN=188;BQB=0.00794793;DP=4166;DP4=1956,2176,7,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.56961e-06;MQSB=0.982719;RPB=0.996095;SGB=-153.343;VDB=0.901065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.2:34711752 chr02:034711752 0 W/34711752-34711752 FN1494-S Single Base Substitution T-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1423-S.SNP.2:34717389 chr02:034717389 0 W/34717389-34717389 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. W246-5-1.SNP.2:34717979 chr02:034717979 0 W/34717979-34717979 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN832-S.SNP.2:34729553 chr02:034729553 0 W/34729553-34729553 FN832-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g56640 retrotransposon protein, putative, unclassified, expressed SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN3356-S.SNP.2:34738218 chr02:034738218 0 W/34738218-34738218 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.775168;DP=3223;DP4=1271,1845,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00093081;MQB=0.00305481;MQSB=0.97602;RPB=0.299343;SGB=21.6609;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.2:34741461 chr02:034741461 0 W/34741461-34741461 FN2456 SNP G -> T AC=1;AN=200;BQB=0.780115;DP=3062;DP4=1539,1339,6,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.0135127;MQSB=0.188522;RPB=0.692958;SGB=25.849;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.2:34745276 chr02:034745276 0 W/34745276-34745276 FN3433-S SNP G -> A AC=2;AN=184;BQB=0.940478;DP=3431;DP4=2087,1229,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.04319e-12;MQSB=0.920636;RPB=0.626716;SGB=84.9167;VDB=0.481388;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.2:34745276 chr02:034745276 0 W/34745276-34745276 FN4020-S SNP G -> A AC=2;AN=168;BQB=0.801781;DP=3261;DP4=1893,1202,27,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19445e-27;MQSB=0.992751;RPB=0.377616;SGB=154.827;VDB=0.814952;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.2:34745276 chr02:034745276 0 W/34745276-34745276 FN884-S Single Base Substitution G-A INTERGENIC HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1136-S.SNP.2:34745824 chr02:034745824 0 W/34745824-34745824 FN1136-S Single Base Substitution A-C INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN799-S.SNP.2:34755180 chr02:034755180 0 W/34755180-34755180 FN799-S Single Base Substitution G-A INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN1056-S.SNP.2:34757723 chr02:034757723 0 W/34757723-34757723 FN1056-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN_546-3-1.SNP.2:34759293 chr02:034759293 0 W/34759293-34759293 FN_546-3-1 Single Base Substitution T-A Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN828-S.SNP.2:34763202 chr02:034763202 0 W/34763202-34763202 FN828-S Single Base Substitution G-C INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3530-S.SNP.2:34763519 chr02:034763519 0 W/34763519-34763519 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.824981;DP=3205;DP4=1327,1789,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.89756e-10;MQSB=0.946929;RPB=0.952106;SGB=64.3306;VDB=0.182035;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.2:34765617 chr02:034765617 0 W/34765617-34765617 FN4260-S SNP A -> G AC=1;AN=170;BQB=0.882354;DP=2410;DP4=1166,1176,13,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.71001e-11;MQSB=0.830561;RPB=0.990073;SGB=83.4133;VDB=0.868655;EFF=INTRON(MODIFIER||||339|LOC_Os02g56700|protein_coding|CODING|LOC_Os02g56700.1|3|1) FN3811-S.SNP.2:34765892 chr02:034765892 0 W/34765892-34765892 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.759937;DP=2651;DP4=1374,1166,16,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.16489e-11;MQSB=0.98436;RPB=0.974436;SGB=64.5316;VDB=0.686854;EFF=INTRON(MODIFIER||||339|LOC_Os02g56700|protein_coding|CODING|LOC_Os02g56700.1|3|1) FN2782-S.SNP.2:34768141 chr02:034768141 0 W/34768141-34768141 FN2782-S SNP G -> C AC=1;AN=198;BQB=0.741013;DP=3694;DP4=1696,1626,20,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.53881e-13;MQSB=0.142605;RPB=0.999904;SGB=104.861;VDB=0.607046;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.2:34768141 chr02:034768141 0 W/34768141-34768141 FN786-S Single Base Substitution G-C INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2398.SNP.2:34769223 chr02:034769223 0 W/34769223-34769223 FN2398 SNP G -> T AC=1;AN=200;BQB=0.934651;DP=4638;DP4=2208,2178,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17245e-10;MQSB=0.388147;RPB=0.755727;SGB=45.1159;VDB=0.590911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.2:34773481 chr02:034773481 0 W/34773481-34773481 FN3447-S SNP C -> T AC=1;AN=184;BQB=0.926598;DP=3237;DP4=1267,1885,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000141013;MQSB=2.27141e-06;RPB=0.90045;SGB=25.1826;VDB=0.315489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.2:34785302 chr02:034785302 0 W/34785302-34785302 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.650513;DP=2262;DP4=1100,1107,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17379e-05;MQSB=0.96577;RPB=0.826085;SGB=25.1826;VDB=0.127533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R182W|732|LOC_Os02g56740|protein_coding|CODING|LOC_Os02g56740.1|3|1),START_GAINED(LOW||||462|LOC_Os02g56740|protein_coding|CODING|LOC_Os02g56740.2|3|1),UTR_5_PRIME(MODIFIER||520||462|LOC_Os02g56740|protein_coding|CODING|LOC_Os02g56740.2|3|1) FN1446-S.SNP.2:34791291 chr02:034791291 0 W/34791291-34791291 FN1446-S Single Base Substitution C-A INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1434-S.SNP.2:34794222 chr02:034794222 0 W/34794222-34794222 FN1434-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1196-S.SNP.2:34798988 chr02:034798988 0 W/34798988-34798988 FN1196-S Single Base Substitution A-T INTRON HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1400-S.SNP.2:34808416 chr02:034808416 0 W/34808416-34808416 FN1400-S Single Base Substitution C-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN863-S.SNP.2:34814220 chr02:034814220 0 W/34814220-34814220 FN863-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g56800 F-box protein PP2-B2, putative, expressed SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1526-S.SNP.2:34816459 chr02:034816459 0 W/34816459-34816459 FN1526-S Single Base Substitution C-T INTERGENIC Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN2397.SNP.2:34820446 chr02:034820446 0 W/34820446-34820446 FN2397 SNP T -> C AC=1;AN=200;BQB=0.498852;DP=4589;DP4=1950,2109,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000217912;MQB=3.18936e-07;MQSB=0.481577;RPB=0.4298;SGB=-10.6896;VDB=0.187476;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.2:34821042 chr02:034821042 0 W/34821042-34821042 FN1325-S Single Base Substitution C-A INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3864-S.SNP.2:34826554 chr02:034826554 0 W/34826554-34826554 FN3864-S SNP G -> A AC=1;AN=158;BQB=0.719765;DP=2549;DP4=1368,1064,13,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.59677e-13;MQSB=0.992203;RPB=0.552022;SGB=42.7743;VDB=0.436146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.2:34835550 chr02:034835550 0 W/34835550-34835550 FN1458-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g56840 OsFBX70 - F-box domain containing protein, expressed SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1458-S.SNP.2:34835551 chr02:034835551 0 W/34835551-34835551 FN1458-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2357.SNP.2:34845313 chr02:034845313 0 W/34845313-34845313 FN2357 SNP A -> T AC=1;AN=192;BQB=0.409849;DP=4916;DP4=2150,2373,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.44307e-18;MQSB=0.949289;RPB=0.652418;SGB=30.82;VDB=0.976273;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.2:34850290 chr02:034850290 0 W/34850290-34850290 FN744-S Single Base Substitution A-G INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2545-S.SNP.2:34874241 chr02:034874241 0 W/34874241-34874241 FN2545-S SNP T -> A AC=2;AN=198;BQB=0.995838;DP=3814;DP4=1624,1997,10,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.16196e-19;MQSB=0.990564;RPB=0.74372;SGB=146.046;VDB=0.0369344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.2:34890076 chr02:034890076 0 W/34890076-34890076 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.715338;DP=4536;DP4=1579,2742,7,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.85608e-15;MQSB=0.984495;RPB=0.995443;SGB=86.8856;VDB=0.843639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R574K|635|LOC_Os02g56920|protein_coding|CODING|LOC_Os02g56920.1|9|1) FN1231-S.SNP.2:34894144 chr02:034894144 0 W/34894144-34894144 FN1231-S Single Base Substitution T-C INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN-165.SNP.2:34896432 chr02:034896432 0 W/34896432-34896432 FN-165 Single Base Substitution A-G INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN1707-S.SNP.2:34901839 chr02:034901839 0 W/34901839-34901839 FN1707-S SNP T -> C AC=2;AN=188;BQB=0.989921;DP=2262;DP4=900,1292,16,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.44533e-13;MQSB=0.999971;RPB=0.220888;SGB=-9.02352;VDB=0.288231;EFF=UTR_5_PRIME(MODIFIER||73||105|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.3|1|1),INTRON(MODIFIER||||131|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.1|1|1),INTRON(MODIFIER||||130|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.2|1|1) FN3698-S.SNP.2:34902400 chr02:034902400 0 W/34902400-34902400 FN3698-S SNP C -> A AC=1;AN=190;BQB=0.546053;DP=2555;DP4=1385,1062,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19118e-06;MQSB=0.998756;RPB=0.909999;SGB=13.4442;VDB=0.0856353;EFF=INTRON(MODIFIER||||131|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.1|2|1),INTRON(MODIFIER||||130|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.2|2|1),INTRON(MODIFIER||||105|LOC_Os02g56940|protein_coding|CODING|LOC_Os02g56940.3|1|1) FN1333-S.SNP.2:34912493 chr02:034912493 0 W/34912493-34912493 FN1333-S Single Base Substitution T-G INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN863-S.SNP.2:34918073 chr02:034918073 0 W/34918073-34918073 FN863-S Single Base Substitution T-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3832-S.SNP.2:34920268 chr02:034920268 0 W/34920268-34920268 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.927245;DP=2950;DP4=1151,1668,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19763e-07;MQSB=0.740119;RPB=0.994482;SGB=62.7569;VDB=0.332758;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.2:34921761 chr02:034921761 0 W/34921761-34921761 FN714-S Single Base Substitution T-C INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN714-S.SNP.2:34921762 chr02:034921762 0 W/34921762-34921762 FN714-S Single Base Substitution A-T INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN714-S.SNP.2:34921763 chr02:034921763 0 W/34921763-34921763 FN714-S Single Base Substitution C-T INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3869-S.SNP.2:34922700 chr02:034922700 0 W/34922700-34922700 FN3869-S SNP C -> G AC=2;AN=158;BQB=0.329617;DP=2353;DP4=1153,1101,13,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.86855e-12;MQSB=0.999807;RPB=0.921139;SGB=84.6152;VDB=0.567516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H52Q|316|LOC_Os02g57010|protein_coding|CODING|LOC_Os02g57010.1|1|1) FN1275-S.SNP.2:34952656 chr02:034952656 0 W/34952656-34952656 FN1275-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2684-S.SNP.2:34956174 chr02:034956174 0 W/34956174-34956174 FN2684-S SNP G -> T AC=1;AN=200;BQB=0.534014;DP=3990;DP4=1708,2011,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000250627;MQB=3.40653e-05;MQSB=6.69424e-05;RPB=0.916936;SGB=16.4591;VDB=0.487101;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.2:34963077 chr02:034963077 0 W/34963077-34963077 FN-196 Single Base Substitution A-G INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1072-S.SNP.2:34973063 chr02:034973063 0 W/34973063-34973063 FN1072-S Single Base Substitution A-G INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2415.SNP.2:34973386 chr02:034973386 0 W/34973386-34973386 FN2415 SNP T -> A AC=1;AN=200;BQB=0.808968;DP=4770;DP4=2178,2240,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70435e-12;MQSB=0.763425;RPB=0.446713;SGB=45.1159;VDB=0.884681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.2:34973387 chr02:034973387 0 W/34973387-34973387 FN2415 SNP C -> A AC=1;AN=200;BQB=0.972037;DP=4776;DP4=2195,2273,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.2539e-13;MQSB=0.801634;RPB=0.655434;SGB=86.5007;VDB=0.699407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.2:34975675 chr02:034975675 0 W/34975675-34975675 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.968692;DP=2514;DP4=1368,1034,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.92312e-07;MQSB=0.952077;RPB=0.0109929;SGB=42.6978;VDB=0.165711;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.2:34984688 chr02:034984688 0 W/34984688-34984688 FN-137 Single Base Substitution G-A INTRON HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-137.SNP.2:34984689 chr02:034984689 0 W/34984689-34984689 FN-137 Single Base Substitution T-A INTRON HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN849-S.SNP.2:34985101 chr02:034985101 0 W/34985101-34985101 FN849-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g57120 HEAT repeat family protein, putative, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3906-S.SNP.2:34991906 chr02:034991906 0 W/34991906-34991906 FN3906-S SNP A -> C AC=1;AN=158;BQB=0.683889;DP=2071;DP4=1156,785,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.72661e-05;MQSB=0.933993;RPB=0.842462;SGB=-3.39162;VDB=0.838691;EFF=UTR_5_PRIME(MODIFIER||1172||934|LOC_Os02g57140|protein_coding|CODING|LOC_Os02g57140.2|1|1),INTRON(MODIFIER||||934|LOC_Os02g57140|protein_coding|CODING|LOC_Os02g57140.1|1|1),INTRON(MODIFIER||||698|LOC_Os02g57140|protein_coding|CODING|LOC_Os02g57140.3|1|1) FN2652-S.SNP.2:35011523 chr02:035011523 0 W/35011523-35011523 FN2652-S SNP A -> G AC=2;AN=200;BQB=0.287777;DP=4891;DP4=2435,2074,31,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6273e-32;MQSB=0.98982;RPB=0.999725;SGB=136.297;VDB=0.254471;EFF=UTR_3_PRIME(MODIFIER||70||155|LOC_Os02g57170|protein_coding|CODING|LOC_Os02g57170.1|4|1) FN1033-S.SNP.2:35013511 chr02:035013511 0 W/35013511-35013511 FN1033-S Single Base Substitution C-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3841-S.SNP.2:35019453 chr02:035019453 0 W/35019453-35019453 FN3841-S SNP T -> C AC=1;AN=190;BQB=0.667171;DP=2365;DP4=1052,1225,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0042192;MQSB=0.993814;RPB=0.940454;SGB=21.8853;VDB=0.48031;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.2:35021630 chr02:035021630 0 W/35021630-35021630 FN3798-S SNP G -> A AC=2;AN=190;BQB=0.995054;DP=2761;DP4=1270,1363,17,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.9429e-16;MQSB=0.933357;RPB=0.985569;SGB=96.5165;VDB=0.742023;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.2:35025579 chr02:035025579 0 W/35025579-35025579 FN1372-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN3095-S.SNP.2:35040046 chr02:035040046 0 W/35040046-35040046 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.384333;DP=2734;DP4=1184,1458,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.65901e-10;MQSB=0.9752;RPB=0.900467;SGB=45.9712;VDB=0.38486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1246T|1252|LOC_Os02g57190|protein_coding|CODING|LOC_Os02g57190.1|33|1) FN449-S.SNP.2:35046979 chr02:035046979 0 W/35046979-35046979 FN449-S Single Base Substitution C-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1186-S.SNP.2:35051800 chr02:035051800 0 W/35051800-35051800 FN1186-S Single Base Substitution T-A INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN-198.SNP.2:35052701 chr02:035052701 0 W/35052701-35052701 FN-198 Single Base Substitution C-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2671-S.SNP.2:35063936 chr02:035063936 0 W/35063936-35063936 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.999987;DP=5181;DP4=2529,2470,4,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0189153;MQB=0.630394;MQSB=4.71779e-13;RPB=0.815952;SGB=8.64371;VDB=0.666297;EFF=INTRON(MODIFIER||||606|LOC_Os02g57230|protein_coding|CODING|LOC_Os02g57230.1|2|1) FN2412.SNP.2:35068149 chr02:035068149 0 W/35068149-35068149 FN2412 SNP A -> T AC=1;AN=200;BQB=0.882938;DP=4084;DP4=1817,1805,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3271e-10;MQSB=0.536823;RPB=0.990811;SGB=34.6953;VDB=0.605429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T23S|328|LOC_Os02g57240|protein_coding|CODING|LOC_Os02g57240.1|1|1) FN1301-S.SNP.2:35073305 chr02:035073305 0 W/35073305-35073305 FN1301-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1674-S.SNP.2:35073305 chr02:035073305 0 W/35073305-35073305 FN1674-S SNP C -> A AC=2;AN=188;BQB=0.152574;DP=3339;DP4=1855,1404,19,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.83269e-09;MQSB=0.892963;RPB=0.285929;SGB=-115.921;VDB=0.57012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.2:35073305 chr02:035073305 0 W/35073305-35073305 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.899179;DP=4992;DP4=2350,2307,21,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53651e-17;MQSB=0.720152;RPB=0.746249;SGB=97.9523;VDB=0.00821977;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.2:35073305 chr02:035073305 0 W/35073305-35073305 FN4047-S SNP C -> A AC=2;AN=168;BQB=0.890753;DP=3049;DP4=1428,1418,10,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.08673e-11;MQSB=0.994583;RPB=0.515158;SGB=44.0621;VDB=0.626441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.2:35075238 chr02:035075238 0 W/35075238-35075238 FN1281-S Single Base Substitution A-T INTRON HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1281-S.SNP.2:35075240 chr02:035075240 0 W/35075240-35075240 FN1281-S Single Base Substitution A-G INTRON HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1211-S.SNP.2:35079977 chr02:035079977 0 W/35079977-35079977 FN1211-S Single Base Substitution T-C INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2735-S.SNP.2:35082389 chr02:035082389 0 W/35082389-35082389 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.999406;DP=5614;DP4=2695,2664,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.71915e-17;MQSB=0.956617;RPB=0.911615;SGB=127.947;VDB=0.346338;EFF=INTRON(MODIFIER||||448|LOC_Os02g57260|protein_coding|CODING|LOC_Os02g57260.1|10|1) FN1082-S.SNP.2:35087950 chr02:035087950 0 W/35087950-35087950 FN1082-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os02g57270 MYB family transcription factor, putative, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1082-S.SNP.2:35087952 chr02:035087952 0 W/35087952-35087952 FN1082-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g57270 MYB family transcription factor, putative, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1082-S.SNP.2:35087953 chr02:035087953 0 W/35087953-35087953 FN1082-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1102-S.SNP.2:35097003 chr02:035097003 0 W/35097003-35097003 FN1102-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os02g57290 cytochrome P450, putative, expressed SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN654-S.SNP.2:35100127 chr02:035100127 0 W/35100127-35100127 FN654-S Single Base Substitution T-G INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1533-S.SNP.2:35100894 chr02:035100894 0 W/35100894-35100894 FN1533-S Single Base Substitution A-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN3937-S.SNP.2:35100894 chr02:035100894 0 W/35100894-35100894 FN3937-S SNP A -> T AC=2;AN=158;BQB=0.99965;DP=2295;DP4=1214,957,6,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.28436e-07;MQSB=0.994225;RPB=1;SGB=34.0735;VDB=0.781267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.2:35101587 chr02:035101587 0 W/35101587-35101587 FN-402 Single Base Substitution A-C INTERGENIC HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3542-S.SNP.2:35101604 chr02:035101604 0 W/35101604-35101604 FN3542-S SNP A -> C AC=2;AN=188;BQB=0.900446;DP=3136;DP4=1573,1368,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.87209e-15;MQSB=0.834753;RPB=0.421721;SGB=89.1337;VDB=0.258717;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.2:35101817 chr02:035101817 0 W/35101817-35101817 FN864-S Single Base Substitution C-A INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN809-S.SNP.2:35104904 chr02:035104904 0 W/35104904-35104904 FN809-S Single Base Substitution C-A INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3856-S.SNP.2:35106023 chr02:035106023 0 W/35106023-35106023 FN3856-S SNP T -> C AC=1;AN=158;BQB=0.944004;DP=2594;DP4=1134,1358,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.31713e-05;MQSB=0.998263;RPB=0.809945;SGB=29.5899;VDB=0.22253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.2:35109610 chr02:035109610 0 W/35109610-35109610 FN1762-S SNP A -> G AC=2;AN=188;BQB=0.772068;DP=3543;DP4=1788,1699,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.85978e-14;MQSB=0.964047;RPB=0.464036;SGB=-43.3017;VDB=0.595515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cCa|L141P|400|LOC_Os02g57305|protein_coding|CODING|LOC_Os02g57305.1|2|1) FN2273-S.SNP.2:35113965 chr02:035113965 0 W/35113965-35113965 FN2273-S SNP A -> G AC=2;AN=190;BQB=0.954371;DP=4464;DP4=2124,1854,18,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.57626e-20;MQSB=0.906291;RPB=0.736308;SGB=79.845;VDB=0.513705;EFF=UTR_3_PRIME(MODIFIER||1021||282|LOC_Os02g57310|protein_coding|CODING|LOC_Os02g57310.1|2|1) FN2329.SNP.2:35121093 chr02:035121093 0 W/35121093-35121093 FN2329 SNP T -> G AC=1;AN=192;BQB=0.746806;DP=5575;DP4=2626,2649,21,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.3356e-19;MQSB=0.884937;RPB=0.997586;SGB=158.755;VDB=0.380319;EFF=INTRON(MODIFIER||||301|LOC_Os02g57330|protein_coding|CODING|LOC_Os02g57330.1|6|1),INTRON(MODIFIER||||220|LOC_Os02g57330|protein_coding|CODING|LOC_Os02g57330.2|5|1) FN2342.SNP.2:35124346 chr02:035124346 0 W/35124346-35124346 FN2342 SNP C -> A AC=1;AN=192;BQB=0.161542;DP=4865;DP4=2294,2330,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.34921e-08;MQSB=0.933327;RPB=0.624822;SGB=4.22611;VDB=0.0690071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T479N|577|LOC_Os02g57340|protein_coding|CODING|LOC_Os02g57340.1|1|1) FN4147-S.SNP.2:35125061 chr02:035125061 0 W/35125061-35125061 FN4147-S SNP G -> A AC=1;AN=170;BQB=0.967286;DP=2638;DP4=1209,1345,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.74342e-07;MQSB=0.936683;RPB=0.765436;SGB=52.3148;VDB=0.496021;EFF=UTR_3_PRIME(MODIFIER||417||577|LOC_Os02g57340|protein_coding|CODING|LOC_Os02g57340.1|1|1) FN2617-S.SNP.2:35127931 chr02:035127931 0 W/35127931-35127931 FN2617-S SNP G -> A AC=2;AN=198;BQB=0.968022;DP=4052;DP4=1958,1871,23,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.4197e-20;MQSB=0.923086;RPB=0.529649;SGB=126.432;VDB=0.535646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.2:35132292 chr02:035132292 0 W/35132292-35132292 FN-183 Single Base Substitution A-T INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN1042-S.SNP.2:35132292 chr02:035132292 0 W/35132292-35132292 FN1042-S Single Base Substitution A-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1407-S.SNP.2:35132292 chr02:035132292 0 W/35132292-35132292 FN1407-S Single Base Substitution A-T INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2333.SNP.2:35137403 chr02:035137403 0 W/35137403-35137403 FN2333 SNP G -> A AC=1;AN=192;BQB=0.489664;DP=5345;DP4=2939,1997,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.93517e-14;MQSB=0.834902;RPB=0.740555;SGB=46.8644;VDB=0.171566;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.2:35138880 chr02:035138880 0 W/35138880-35138880 FN1142-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2333.SNP.2:35141013 chr02:035141013 0 W/35141013-35141013 FN2333 SNP G -> T AC=1;AN=192;BQB=0.989969;DP=5181;DP4=2493,2383,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04819e-10;MQSB=0.805722;RPB=0.721459;SGB=34.0426;VDB=0.732629;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.2:35141726 chr02:035141726 0 W/35141726-35141726 FN794-S Single Base Substitution T-G INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN4090-S.SNP.2:35147451 chr02:035147451 0 W/35147451-35147451 FN4090-S SNP A -> T AC=2;AN=182;BQB=0.946676;DP=2546;DP4=1263,1207,5,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.69773e-07;MQSB=0.977246;RPB=0.98528;SGB=53.1331;VDB=0.74314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.2:35149462 chr02:035149462 0 W/35149462-35149462 FN1027-S Single Base Substitution A-G INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2492.SNP.2:35151196 chr02:035151196 0 W/35151196-35151196 FN2492 SNP A -> G AC=2;AN=200;BQB=0.97011;DP=5122;DP4=2389,2362,25,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.27165e-29;MQSB=0.790435;RPB=0.493138;SGB=177.266;VDB=0.561017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3542-S.SNP.2:35154304 chr02:035154304 0 W/35154304-35154304 FN3542-S SNP T -> C AC=2;AN=188;BQB=0.68105;DP=2630;DP4=1279,1218,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.21576e-09;MQSB=0.876983;RPB=0.999939;SGB=67.8739;VDB=0.501903;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.2:35160086 chr02:035160086 0 W/35160086-35160086 FN712-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os02g57380 thioredoxin, putative, expressed SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1162-S.SNP.2:35173125 chr02:035173125 0 W/35173125-35173125 FN1162-S Single Base Substitution A-T START_GAINED HET LOC_Os02g57400 2-phosphoglycerate kinase-related, putative, expressed SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1422-S.SNP.2:35182622 chr02:035182622 0 W/35182622-35182622 FN1422-S Single Base Substitution G-C INTRON HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1531-S.SNP.2:35185984 chr02:035185984 0 W/35185984-35185984 FN1531-S Single Base Substitution T-G INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN461-S.SNP.2:35195060 chr02:035195060 0 W/35195060-35195060 FN461-S Single Base Substitution G-C INTERGENIC HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3950-S.SNP.2:35197167 chr02:035197167 0 W/35197167-35197167 FN3950-S SNP C -> T AC=2;AN=168;BQB=0.851627;DP=2662;DP4=1190,1322,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.8491e-16;MQSB=0.948686;RPB=0.135655;SGB=113.657;VDB=0.403836;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.2:35200810 chr02:035200810 0 W/35200810-35200810 FN3807-S SNP T -> G AC=2;AN=190;BQB=0.995592;DP=2899;DP4=1217,1462,6,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.75663e-12;MQSB=0.871309;RPB=0.216093;SGB=64.5316;VDB=0.704624;EFF=UTR_5_PRIME(MODIFIER||13||188|LOC_Os02g57430|protein_coding|CODING|LOC_Os02g57430.1|1|1) FN735-S.SNP.2:35200810 chr02:035200810 0 W/35200810-35200810 FN735-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN1231-S.SNP.2:35202925 chr02:035202925 0 W/35202925-35202925 FN1231-S Single Base Substitution T-A INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN-165.SNP.2:35212696 chr02:035212696 0 W/35212696-35212696 FN-165 Single Base Substitution T-A INTERGENIC HOMO SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3997-S.SNP.2:35218670 chr02:035218670 0 W/35218670-35218670 FN3997-S SNP A -> T AC=2;AN=168;BQB=0.9116;DP=2613;DP4=1285,1189,10,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.56673e-17;MQSB=0.816803;RPB=0.983341;SGB=127.497;VDB=0.864295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I580N|621|LOC_Os02g57470|protein_coding|CODING|LOC_Os02g57470.1|2|1) FN1549-S.SNP.2:35222143 chr02:035222143 0 W/35222143-35222143 FN1549-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2255-S.SNP.2:35222143 chr02:035222143 0 W/35222143-35222143 FN2255-S SNP A -> G AC=1;AN=190;BQB=0.497299;DP=4834;DP4=2106,2432,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206868;MQB=2.43444e-05;MQSB=0.944504;RPB=0.969315;SGB=-3.65821;VDB=0.921479;EFF=UTR_3_PRIME(MODIFIER||187||453|LOC_Os02g57480|protein_coding|CODING|LOC_Os02g57480.1|1|1) FN3420-S.SNP.2:35222204 chr02:035222204 0 W/35222204-35222204 FN3420-S SNP G -> A AC=2;AN=184;BQB=0.443417;DP=3457;DP4=1929,1393,16,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.25377e-11;MQSB=0.445535;RPB=0.821082;SGB=48.493;VDB=0.930722;EFF=UTR_3_PRIME(MODIFIER||126||453|LOC_Os02g57480|protein_coding|CODING|LOC_Os02g57480.1|1|1) FN-212.SNP.2:35224437 chr02:035224437 0 W/35224437-35224437 FN-212 Single Base Substitution G-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2638-S.SNP.2:35227597 chr02:035227597 0 W/35227597-35227597 FN2638-S SNP C -> A AC=1;AN=200;BQB=0.454049;DP=4931;DP4=2278,2429,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1104e-14;MQSB=0.915905;RPB=0.75965;SGB=109.527;VDB=0.470454;EFF=UTR_3_PRIME(MODIFIER||148||216|LOC_Os02g57490|protein_coding|CODING|LOC_Os02g57490.1|2|1) FN2408.SNP.2:35228011 chr02:035228011 0 W/35228011-35228011 FN2408 SNP T -> A AC=1;AN=200;BQB=0.99789;DP=4342;DP4=1602,2358,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.9814e-08;MQSB=0.464763;RPB=0.503872;SGB=58.8698;VDB=0.142558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S129C|216|LOC_Os02g57490|protein_coding|CODING|LOC_Os02g57490.1|2|1) FN3494-S.SNP.2:35230731 chr02:035230731 0 W/35230731-35230731 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.501175;DP=2714;DP4=1121,1324,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.07661e-06;MQSB=0.9816;RPB=0.999984;SGB=-15.2358;VDB=0.134026;EFF=UTR_3_PRIME(MODIFIER||326||413|LOC_Os02g57500|protein_coding|CODING|LOC_Os02g57500.1|5|1) FN2306.SNP.2:35235017 chr02:035235017 0 W/35235017-35235017 FN2306 SNP G -> T AC=1;AN=192;BQB=0.993611;DP=4999;DP4=2588,2191,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.53076e-06;MQSB=0.997905;RPB=0.591068;SGB=10.9636;VDB=0.482741;EFF=INTRON(MODIFIER||||122|LOC_Os02g57510|protein_coding|CODING|LOC_Os02g57510.1|2|1),INTRON(MODIFIER||||122|LOC_Os02g57510|protein_coding|CODING|LOC_Os02g57510.2|2|1),INTRON(MODIFIER||||118|LOC_Os02g57510|protein_coding|CODING|LOC_Os02g57510.3|2|1),INTRON(MODIFIER||||118|LOC_Os02g57510|protein_coding|CODING|LOC_Os02g57510.4|2|1) FN2550-S.SNP.2:35239299 chr02:035239299 0 W/35239299-35239299 FN2550-S SNP G -> C AC=1;AN=198;BQB=0.771203;DP=3876;DP4=1785,1896,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.98448e-06;MQSB=0.999976;RPB=0.824665;SGB=36.5539;VDB=0.182601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.2:35252782 chr02:035252782 0 W/35252782-35252782 FN2455 SNP T -> C AC=2;AN=200;BQB=0.41537;DP=3445;DP4=1451,1463,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14996e-21;MQSB=0.384405;RPB=0.919944;SGB=59.2806;VDB=0.0239734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L223P|836|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L157P|770|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L157P|770|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L157P|606|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.4|5|1) FN2120-S.SNP.2:35256010 chr02:035256010 0 W/35256010-35256010 FN2120-S SNP C -> A AC=2;AN=168;BQB=0.974818;DP=3251;DP4=1883,1310,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.42865e-18;MQSB=0.948422;RPB=0.670429;SGB=-46.9043;VDB=0.640291;EFF=UTR_3_PRIME(MODIFIER||1877||606|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.4|5|1),UTR_3_PRIME(MODIFIER||1266||836|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.1|5|1),UTR_3_PRIME(MODIFIER||1266||770|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.2|6|1),UTR_3_PRIME(MODIFIER||1266||770|LOC_Os02g57530|protein_coding|CODING|LOC_Os02g57530.3|5|1) FN2646-S.SNP.2:35257524 chr02:035257524 0 W/35257524-35257524 FN2646-S SNP T -> C AC=1;AN=200;BQB=0.787739;DP=4887;DP4=2415,2271,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204625;MQB=3.05448e-12;MQSB=0.879545;RPB=0.986684;SGB=19.1209;VDB=0.108752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T34A|147|LOC_Os02g57540|protein_coding|CODING|LOC_Os02g57540.1|2|1) FN2646-S.SNP.2:35257528 chr02:035257528 0 W/35257528-35257528 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.644486;DP=4894;DP4=2479,2189,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204332;MQB=1.79625e-11;MQSB=0.789508;RPB=0.954371;SGB=81.8956;VDB=0.217283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q32H|147|LOC_Os02g57540|protein_coding|CODING|LOC_Os02g57540.1|2|1) FN2531-S.SNP.2:35260751 chr02:035260751 0 W/35260751-35260751 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.435653;DP=4273;DP4=1935,2114,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.15762e-06;MQSB=0.820002;RPB=0.967224;SGB=16.3688;VDB=0.516659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.2:35266202 chr02:035266202 0 W/35266202-35266202 FN1314-S Single Base Substitution A-T INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN486-S.SNP.2:35269024 chr02:035269024 0 W/35269024-35269024 FN486-S Single Base Substitution A-G INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1287-S.SNP.2:35282085 chr02:035282085 0 W/35282085-35282085 FN1287-S Single Base Substitution G-A INTRON HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3746-S.SNP.2:35294703 chr02:035294703 0 W/35294703-35294703 FN3746-S SNP T -> G AC=1;AN=190;BQB=0.955807;DP=2786;DP4=1345,1310,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78274e-06;MQSB=0.804633;RPB=0.79325;SGB=-2.10437;VDB=0.248694;EFF=UTR_5_PRIME(MODIFIER||578||278|LOC_Os02g57630|protein_coding|CODING|LOC_Os02g57630.4|2|1),INTRON(MODIFIER||||331|LOC_Os02g57630|protein_coding|CODING|LOC_Os02g57630.1|3|1),INTRON(MODIFIER||||331|LOC_Os02g57630|protein_coding|CODING|LOC_Os02g57630.2|3|1),INTRON(MODIFIER||||296|LOC_Os02g57630|protein_coding|CODING|LOC_Os02g57630.3|3|1) FN712-S.SNP.2:35297033 chr02:035297033 0 W/35297033-35297033 FN712-S Single Base Substitution C-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1504-S.SNP.2:35310862 chr02:035310862 0 W/35310862-35310862 FN1504-S Single Base Substitution C-T INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN4083-S.SNP.2:35316004 chr02:035316004 0 W/35316004-35316004 FN4083-S SNP T -> G AC=2;AN=182;BQB=0.443354;DP=2571;DP4=1316,1122,26,25;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.4237e-22;MQSB=0.999862;RPB=0.793897;SGB=219.053;VDB=0.393911;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.2:35320870 chr02:035320870 0 W/35320870-35320870 FN-249 Single Base Substitution C-A UTR_3_PRIME HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-249.SNP.2:35320871 chr02:035320871 0 W/35320871-35320871 FN-249 Single Base Substitution C-A UTR_3_PRIME HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN712-S.SNP.2:35331126 chr02:035331126 0 W/35331126-35331126 FN712-S Single Base Substitution T-C INTRON HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN-387.SNP.2:35333395 chr02:035333395 0 W/35333395-35333395 FN-387 Single Base Substitution T-A INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1330-S.SNP.2:35338858 chr02:035338858 0 W/35338858-35338858 FN1330-S Single Base Substitution T-C INTRON HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2383.SNP.2:35351021 chr02:035351021 0 W/35351021-35351021 FN2383 SNP A -> T AC=1;AN=192;BQB=0.931244;DP=5301;DP4=2254,2744,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.12093e-16;MQSB=0.982194;RPB=0.0343595;SGB=89.6809;VDB=0.572277;EFF=UTR_3_PRIME(MODIFIER||100||288|LOC_Os02g57720|protein_coding|CODING|LOC_Os02g57720.1|2|1) FN2381.SNP.2:35362089 chr02:035362089 0 W/35362089-35362089 FN2381 SNP A -> G AC=1;AN=192;BQB=0.824765;DP=4461;DP4=2309,1815,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.08609e-06;MQSB=0.000183509;RPB=0.974514;SGB=13.5279;VDB=0.222794;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.2:35369512 chr02:035369512 0 W/35369512-35369512 FN3537-S SNP C -> A AC=2;AN=188;BQB=0.994481;DP=2689;DP4=1374,1238,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.34764e-14;MQSB=0.962019;RPB=0.833977;SGB=74.9605;VDB=0.566267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.2:35372097 chr02:035372097 0 W/35372097-35372097 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.758097;DP=4449;DP4=1825,2368,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.75509e-10;MQSB=0.993073;RPB=0.983167;SGB=34.5346;VDB=0.965909;EFF=INTRON(MODIFIER||||365|LOC_Os02g57760|protein_coding|CODING|LOC_Os02g57760.1|2|1) FN1047-S.SNP.2:35377489 chr02:035377489 0 W/35377489-35377489 FN1047-S Single Base Substitution C-A INTRON HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-255.SNP.2:35377862 chr02:035377862 0 W/35377862-35377862 FN-255 Single Base Substitution T-C INTRON HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN4017-S.SNP.2:35378587 chr02:035378587 0 W/35378587-35378587 FN4017-S SNP C -> T AC=2;AN=168;BQB=0.973948;DP=2344;DP4=1185,1058,20,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.34147e-15;MQSB=0.733963;RPB=0.376236;SGB=58.647;VDB=0.512385;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L57|327|LOC_Os02g57770|protein_coding|CODING|LOC_Os02g57770.1|1|1) FN_949-1.SNP.2:35385190 chr02:035385190 0 W/35385190-35385190 FN_949-1 Single Base Substitution C-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1058-S.SNP.2:35385192 chr02:035385192 0 W/35385192-35385192 FN1058-S Single Base Substitution A-G INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3823-S.SNP.2:35395236 chr02:035395236 0 W/35395236-35395236 FN3823-S SNP C -> A AC=2;AN=190;BQB=0.99559;DP=2694;DP4=1279,1291,4,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.34942e-13;MQSB=0.876481;RPB=0.995368;SGB=90.0802;VDB=0.0435276;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.2:35403924 chr02:035403924 0 W/35403924-35403924 FN-55 Single Base Substitution C-T INTERGENIC HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN633-S.SNP.2:35404246 chr02:035404246 0 W/35404246-35404246 FN633-S Single Base Substitution T-G INTERGENIC HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN2351.SNP.2:35410419 chr02:035410419 0 W/35410419-35410419 FN2351 SNP G -> A AC=1;AN=192;BQB=0.800548;DP=4521;DP4=2210,2022,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.39766e-11;MQSB=0.950136;RPB=0.854834;SGB=76.5965;VDB=0.335082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G333R|531|LOC_Os02g57810|protein_coding|CODING|LOC_Os02g57810.1|1|1) FN2351.SNP.2:35410420 chr02:035410420 0 W/35410420-35410420 FN2351 SNP G -> A AC=1;AN=192;BQB=0.82541;DP=4508;DP4=2201,2011,15,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.86768e-12;MQSB=0.783582;RPB=0.832435;SGB=57.6018;VDB=0.575476;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G333E|531|LOC_Os02g57810|protein_coding|CODING|LOC_Os02g57810.1|1|1) FN530-S.SNP.2:35413813 chr02:035413813 0 W/35413813-35413813 FN530-S Single Base Substitution C-A INTERGENIC HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN502-S.SNP.2:35425528 chr02:035425528 0 W/35425528-35425528 FN502-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN917-S.SNP.2:35433687 chr02:035433687 0 W/35433687-35433687 FN917-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN465-S.SNP.2:35457705 chr02:035457705 0 W/35457705-35457705 FN465-S Single Base Substitution A-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3420-S.SNP.2:35459676 chr02:035459676 0 W/35459676-35459676 FN3420-S SNP G -> T AC=1;AN=184;BQB=0.934789;DP=3188;DP4=1120,1957,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.82423e-05;MQSB=0.527852;RPB=0.561181;SGB=30.6558;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.2:35461568 chr02:035461568 0 W/35461568-35461568 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.991358;DP=4333;DP4=2087,2005,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.39831e-07;MQSB=0.975349;RPB=0.734877;SGB=32.9588;VDB=0.507257;EFF=INTRON(MODIFIER||||90|LOC_Os02g57924|protein_coding|CODING|LOC_Os02g57924.1|2|1) FN1339-S.SNP.2:35465779 chr02:035465779 0 W/35465779-35465779 FN1339-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3947-S.SNP.2:35467640 chr02:035467640 0 W/35467640-35467640 FN3947-S SNP T -> C AC=1;AN=168;BQB=0.987572;DP=3100;DP4=1199,1502,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.00431e-13;MQSB=0.810758;RPB=0.453621;SGB=-43.4892;VDB=0.141957;EFF=INTRON(MODIFIER||||1561|LOC_Os02g57930|protein_coding|CODING|LOC_Os02g57930.1|2|1) FN3493-S.SNP.2:35469735 chr02:035469735 0 W/35469735-35469735 FN3493-S SNP G -> T AC=1;AN=184;BQB=0.884524;DP=2962;DP4=1351,1542,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.30173e-06;MQSB=0.88515;RPB=0.68247;SGB=39.2697;VDB=0.613071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C861F|1561|LOC_Os02g57930|protein_coding|CODING|LOC_Os02g57930.1|4|1) FN908-S.SNP.2:35471122 chr02:035471122 0 W/35471122-35471122 FN908-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1237-S.SNP.2:35473470 chr02:035473470 0 W/35473470-35473470 FN1237-S Single Base Substitution C-T INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1514-S.SNP.2:35475567 chr02:035475567 0 W/35475567-35475567 FN1514-S Single Base Substitution G-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3286-S.SNP.2:35487409 chr02:035487409 0 W/35487409-35487409 FN3286-S SNP T -> C AC=1;AN=184;BQB=0.946879;DP=2577;DP4=983,1454,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.74342e-09;MQSB=0.884607;RPB=0.97476;SGB=46.3132;VDB=0.86102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.2:35503786 chr02:035503786 0 W/35503786-35503786 FN1307-S Single Base Substitution G-T INTRON HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2458.SNP.2:35505453 chr02:035505453 0 W/35505453-35505453 FN2458 SNP T -> A AC=1;AN=200;BQB=0.222733;DP=5228;DP4=2212,2595,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28955e-14;MQSB=0.989752;RPB=0.963265;SGB=25.5416;VDB=0.347253;EFF=INTRON(MODIFIER||||811|LOC_Os02g57980|protein_coding|CODING|LOC_Os02g57980.1|2|1) FN1000-S.SNP.2:35514365 chr02:035514365 0 W/35514365-35514365 FN1000-S Single Base Substitution T-A INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2637-S.SNP.2:35533033 chr02:035533033 0 W/35533033-35533033 FN2637-S SNP G -> T AC=1;AN=200;BQB=0.940486;DP=4878;DP4=1936,2671,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00284e-14;MQSB=0.825836;RPB=0.65652;SGB=50.3263;VDB=0.777672;EFF=UTR_5_PRIME(MODIFIER||111||586|LOC_Os02g58030|protein_coding|CODING|LOC_Os02g58030.1|1|1) FN1549-S.SNP.2:35533675 chr02:035533675 0 W/35533675-35533675 FN1549-S Single Base Substitution A-T INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1735-S.SNP.2:35542152 chr02:035542152 0 W/35542152-35542152 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.707816;DP=4025;DP4=1683,2288,16,26;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.09561e-19;MQSB=0.97795;RPB=0.964108;SGB=-93.95;VDB=0.0364592;EFF=INTRON(MODIFIER||||153|LOC_Os02g58050|protein_coding|CODING|LOC_Os02g58050.1|2|1) FN1916.SNP.2:35558086 chr02:035558086 0 W/35558086-35558086 FN1916 Single Base Substitution G-T Homo LOC_Os02g58090 PSP domain containing protein, expressed SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN622-S.SNP.2:35559295 chr02:035559295 0 W/35559295-35559295 FN622-S Single Base Substitution T-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3723-S.SNP.2:35559600 chr02:035559600 0 W/35559600-35559600 FN3723-S SNP T -> G AC=1;AN=190;BQB=0.90414;DP=2788;DP4=1275,1291,1,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.47069e-06;MQSB=0.735799;RPB=0.786864;SGB=28.9929;VDB=0.0875327;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.2:35569684 chr02:035569684 0 W/35569684-35569684 FN337-S Single Base Substitution G-T INTRON HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN2200-S.SNP.2:35572409 chr02:035572409 0 W/35572409-35572409 FN2200-S SNP A -> G AC=1;AN=190;BQB=0.907955;DP=4528;DP4=2198,2059,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.65961e-06;MQSB=0.879324;RPB=0.94055;SGB=23.6597;VDB=0.740498;EFF=UTR_3_PRIME(MODIFIER||794||191|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.3|8|1),UTR_3_PRIME(MODIFIER||1504||580|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.2|3|1),UTR_3_PRIME(MODIFIER||1504||580|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.1|2|1) FN4016-S.SNP.2:35575545 chr02:035575545 0 W/35575545-35575545 FN4016-S SNP G -> A AC=1;AN=168;BQB=0.998809;DP=1991;DP4=1019,808,2,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00101204;MQSB=0.998322;RPB=0.980859;SGB=17.5943;VDB=0.283405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S105F|580|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S105F|580|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.2|1|1),INTRON(MODIFIER||||191|LOC_Os02g58139|protein_coding|CODING|LOC_Os02g58139.3|7|1) FN3375-S.SNP.2:35585473 chr02:035585473 0 W/35585473-35585473 FN3375-S SNP G -> A AC=2;AN=184;BQB=0.9128;DP=3679;DP4=1420,2113,6,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.05669e-16;MQSB=0.997848;RPB=0.856926;SGB=102.662;VDB=0.958594;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q149|419|LOC_Os02g58150|protein_coding|CODING|LOC_Os02g58150.1|1|1) FN780-S.SNP.2:35595145 chr02:035595145 0 W/35595145-35595145 FN780-S Single Base Substitution T-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1552-S.SNP.2:35599558 chr02:035599558 0 W/35599558-35599558 FN1552-S SNP G -> T AC=1;AN=188;BQB=0.550252;DP=3612;DP4=1878,1696,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=8.1182e-07;MQSB=1.67464e-13;RPB=0.495585;SGB=-11.74;VDB=0.40436;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A596S|859|LOC_Os02g58170|protein_coding|CODING|LOC_Os02g58170.1|6|1) FN1082-S.SNP.2:35605146 chr02:035605146 0 W/35605146-35605146 FN1082-S Single Base Substitution G-A INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1040-S.SNP.2:35615200 chr02:035615200 0 W/35615200-35615200 FN1040-S Single Base Substitution G-C INTERGENIC HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN-51.SNP.2:35619412 chr02:035619412 0 W/35619412-35619412 FN-51 Single Base Substitution G-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.2:35619412 chr02:035619412 0 W/35619412-35619412 FN-51 Single Base Substitution G-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN347-S.SNP.2:35622642 chr02:035622642 0 W/35622642-35622642 FN347-S Single Base Substitution A-T INTERGENIC HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3667-S.SNP.2:35631097 chr02:035631097 0 W/35631097-35631097 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.982641;DP=2521;DP4=1162,1268,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40631e-05;MQSB=0.999982;RPB=0.258217;SGB=18.3316;VDB=0.060425;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.2:35636762 chr02:035636762 0 W/35636762-35636762 FN549-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN721-S.SNP.2:35652536 chr02:035652536 0 W/35652536-35652536 FN721-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os02g58240 transposon protein, putative, unclassified, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN471-S.SNP.2:35664084 chr02:035664084 0 W/35664084-35664084 FN471-S Single Base Substitution A-G INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2600-S.SNP.2:35680051 chr02:035680051 0 W/35680051-35680051 FN2600-S SNP T -> G AC=1;AN=198;BQB=0.95436;DP=4560;DP4=2179,2101,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.4996e-16;MQSB=0.999527;RPB=0.858984;SGB=109.285;VDB=0.484297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.2:35695842 chr02:035695842 0 W/35695842-35695842 FN2102-S SNP A -> T AC=1;AN=168;BQB=0.511057;DP=4176;DP4=2036,2102,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50939e-09;MQSB=0.969923;RPB=0.980412;SGB=-72.7757;VDB=0.568406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F911Y|1535|LOC_Os02g58360|protein_coding|CODING|LOC_Os02g58360.1|6|1) FN2648-S.SNP.2:35714688 chr02:035714688 0 W/35714688-35714688 FN2648-S SNP G -> C AC=2;AN=200;BQB=0.822903;DP=4420;DP4=1768,2314,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6128e-20;MQSB=0.991146;RPB=0.804291;SGB=84.1935;VDB=0.783262;EFF=INTRON(MODIFIER||||120|LOC_Os02g58400|protein_coding|CODING|LOC_Os02g58400.1|1|1) FN1373-S.SNP.2:35716447 chr02:035716447 0 W/35716447-35716447 FN1373-S Single Base Substitution G-A INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN_812-4-1.SNP.2:35721192 chr02:035721192 0 W/35721192-35721192 FN_812-4-1 Single Base Substitution T-C Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN486-S.SNP.2:35723251 chr02:035723251 0 W/35723251-35723251 FN486-S Single Base Substitution G-A INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1682-S.SNP.2:35730277 chr02:035730277 0 W/35730277-35730277 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.135535;DP=3756;DP4=2247,1465,18,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18784e-19;MQSB=0.997801;RPB=0.363408;SGB=31.7742;VDB=0.581621;EFF=UTR_3_PRIME(MODIFIER||259||2142|LOC_Os02g58410|protein_coding|CODING|LOC_Os02g58410.1|17|1) FN2264-S.SNP.2:35734030 chr02:035734030 0 W/35734030-35734030 FN2264-S SNP C -> G AC=2;AN=190;BQB=0.334916;DP=4549;DP4=1870,2352,9,11;HOB=0.020831;ICB=0.494793;MQ=19;MQ0F=0.219169;MQB=0.715399;MQSB=1.00561e-22;RPB=0.260408;SGB=36.4291;VDB=0.331571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1023P|1472|LOC_Os02g58430|protein_coding|CODING|LOC_Os02g58430.1|4|1) FN2310.SNP.2:35734030 chr02:035734030 0 W/35734030-35734030 FN2310 SNP C -> G AC=2;AN=192;BQB=0.627111;DP=5153;DP4=2058,2751,19,28;HOB=0.0206163;ICB=0.494846;MQ=18;MQ0F=0.219096;MQB=0.134315;MQSB=1.21842e-19;RPB=0.999887;SGB=-100.392;VDB=0.324245;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1023P|1472|LOC_Os02g58430|protein_coding|CODING|LOC_Os02g58430.1|4|1) FN2568-S.SNP.2:35734030 chr02:035734030 0 W/35734030-35734030 FN2568-S SNP C -> G AC=1;AN=198;BQB=0.658654;DP=4282;DP4=1847,2204,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=18;MQ0F=0.217422;MQB=0.177443;MQSB=9.60497e-20;RPB=0.716499;SGB=21.559;VDB=0.34069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1023P|1472|LOC_Os02g58430|protein_coding|CODING|LOC_Os02g58430.1|4|1) FN3856-S.SNP.2:35734030 chr02:035734030 0 W/35734030-35734030 FN3856-S SNP C -> G AC=2;AN=158;BQB=0.988899;DP=3011;DP4=1500,1403,9,11;HOB=0.024996;ICB=0.493752;MQ=15;MQ0F=0.363334;MQB=0.0706138;MQSB=0;RPB=0.0746597;SGB=82.0227;VDB=0.128712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1023P|1472|LOC_Os02g58430|protein_coding|CODING|LOC_Os02g58430.1|4|1) FN3991-S.SNP.2:35734030 chr02:035734030 0 W/35734030-35734030 FN3991-S SNP C -> G AC=1;AN=168;BQB=0.998418;DP=3373;DP4=1677,1554,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=14;MQ0F=0.392529;MQB=0.00389929;MQSB=0;RPB=0.756556;SGB=105.343;VDB=0.795056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A1023P|1472|LOC_Os02g58430|protein_coding|CODING|LOC_Os02g58430.1|4|1) FN3311-S.SNP.2:35739745 chr02:035739745 0 W/35739745-35739745 FN3311-S Single Base Substitution C-T INTRON HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1337-S.SNP.2:35746567 chr02:035746567 0 W/35746567-35746567 FN1337-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1650-S.SNP.2:35771204 chr02:035771204 0 W/35771204-35771204 FN1650-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os02g58500 phospholipase A2, putative, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1650-S.SNP.2:35771205 chr02:035771205 0 W/35771205-35771205 FN1650-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1514-S.SNP.2:35773606 chr02:035773606 0 W/35773606-35773606 FN1514-S Single Base Substitution A-G INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2395.SNP.2:35778251 chr02:035778251 0 W/35778251-35778251 FN2395 SNP C -> T AC=1;AN=200;BQB=0.549375;DP=5481;DP4=2606,2560,23,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33841e-26;MQSB=0.878019;RPB=0.868262;SGB=152.03;VDB=0.29037;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.2:35793470 chr02:035793470 0 W/35793470-35793470 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.592208;DP=2932;DP4=1491,1363,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0788e-05;MQSB=0.996693;RPB=0.765463;SGB=39.9877;VDB=0.553359;EFF=UTR_3_PRIME(MODIFIER||1878||106|LOC_Os02g58554|protein_coding|CODING|LOC_Os02g58554.1|12|1) FN2196-S.SNP.2:35816681 chr02:035816681 0 W/35816681-35816681 FN2196-S SNP T -> A AC=1;AN=190;BQB=0.998678;DP=5014;DP4=2422,2265,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.15294e-09;MQSB=0.998416;RPB=0.825432;SGB=23.6597;VDB=0.960414;EFF=INTRON(MODIFIER||||448|LOC_Os02g58590|protein_coding|CODING|LOC_Os02g58590.1|4|1) FN3293-S.SNP.2:35824174 chr02:035824174 0 W/35824174-35824174 FN3293-S SNP T -> C AC=2;AN=184;BQB=0.366731;DP=3862;DP4=1741,1813,28,22;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=3.59054e-25;MQSB=9.90475e-09;RPB=0.884226;SGB=57.0213;VDB=0.588129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V325A|1097|LOC_Os02g58620|protein_coding|CODING|LOC_Os02g58620.1|1|1) FN2577-S.SNP.2:35845480 chr02:035845480 0 W/35845480-35845480 FN2577-S SNP C -> A AC=2;AN=198;BQB=0.607762;DP=4420;DP4=2401,1732,21,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.92696e-13;MQSB=0.878278;RPB=0.999951;SGB=-76.6842;VDB=0.21319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.2:35846052 chr02:035846052 0 W/35846052-35846052 FN1374-S Single Base Substitution T-G INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3420-S.SNP.2:35853611 chr02:035853611 0 W/35853611-35853611 FN3420-S SNP A -> G AC=2;AN=184;BQB=0.963876;DP=2580;DP4=1050,1220,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.66372e-10;MQSB=0.988617;RPB=0.903728;SGB=43.4494;VDB=0.0249648;EFF=UTR_3_PRIME(MODIFIER||248||142|LOC_Os02g58670|protein_coding|CODING|LOC_Os02g58670.1|3|1),UTR_3_PRIME(MODIFIER||686||102|LOC_Os02g58670|protein_coding|CODING|LOC_Os02g58670.2|2|1) FN-101.SNP.2:35857903 chr02:035857903 0 W/35857903-35857903 FN-101 Single Base Substitution A-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3723-S.SNP.2:35858559 chr02:035858559 0 W/35858559-35858559 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.998845;DP=2697;DP4=1393,1186,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.24568e-06;MQSB=0.70311;RPB=0.99389;SGB=44.5415;VDB=0.728489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.2:35867711 chr02:035867711 0 W/35867711-35867711 FN3323-S SNP C -> T AC=2;AN=184;BQB=0.789471;DP=3173;DP4=1565,1511,5,14;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00283643;MQB=1.28684e-06;MQSB=0.986057;RPB=0.597333;SGB=56.8786;VDB=0.0962178;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1186*|1396|LOC_Os02g58710|protein_coding|CODING|LOC_Os02g58710.1|5|1) FN3687-S.SNP.2:35867711 chr02:035867711 0 W/35867711-35867711 FN3687-S SNP C -> T AC=2;AN=190;BQB=0.938656;DP=2742;DP4=1330,1307,14,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00328228;MQB=3.57216e-10;MQSB=0.360369;RPB=0.946039;SGB=108.296;VDB=0.728751;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1186*|1396|LOC_Os02g58710|protein_coding|CODING|LOC_Os02g58710.1|5|1) FN3844-S.SNP.2:35867711 chr02:035867711 0 W/35867711-35867711 FN3844-S SNP C -> T AC=2;AN=190;BQB=0.798872;DP=3026;DP4=1436,1498,12,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00297422;MQB=4.50045e-08;MQSB=0.245325;RPB=0.946938;SGB=75.1932;VDB=0.482421;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1186*|1396|LOC_Os02g58710|protein_coding|CODING|LOC_Os02g58710.1|5|1) FN404-S.SNP.2:35869787 chr02:035869787 0 W/35869787-35869787 FN404-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os02g58710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN-237.SNP.2:35881604 chr02:035881604 0 W/35881604-35881604 FN-237 Single Base Substitution T-A INTRON HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2283.SNP.2:35883659 chr02:035883659 0 W/35883659-35883659 FN2283 SNP G -> C AC=1;AN=192;BQB=0.963981;DP=5044;DP4=2197,2511,10,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000198255;MQB=1.49719e-19;MQSB=0.991107;RPB=0.986652;SGB=111.067;VDB=0.674883;EFF=INTRON(MODIFIER||||197|LOC_Os02g58730|protein_coding|CODING|LOC_Os02g58730.1|4|1),INTRON(MODIFIER||||195|LOC_Os02g58730|protein_coding|CODING|LOC_Os02g58730.2|4|1) FN2458.SNP.2:35891624 chr02:035891624 0 W/35891624-35891624 FN2458 SNP A -> G AC=1;AN=200;BQB=0.890289;DP=4649;DP4=1819,2536,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002151;MQB=1.63934e-11;MQSB=0.87495;RPB=0.890449;SGB=77.2904;VDB=0.285863;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.2:35892603 chr02:035892603 0 W/35892603-35892603 FN3050-S SNP G -> A AC=1;AN=184;BQB=0.885391;DP=2982;DP4=1283,1587,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000165434;MQSB=1.15537e-05;RPB=0.23731;SGB=21.6609;VDB=0.0181823;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.2:35897320 chr02:035897320 0 W/35897320-35897320 FN483-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g58760 retrotransposon protein, putative, unclassified, expressed SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN632-S.SNP.2:35898628 chr02:035898628 0 W/35898628-35898628 FN632-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1338-S.SNP.2:35900340 chr02:035900340 0 W/35900340-35900340 FN1338-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3577-S.SNP.2:35904034 chr02:035904034 0 W/35904034-35904034 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.989133;DP=2935;DP4=1464,1369,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000340716;MQB=1.63261e-08;MQSB=0.0441307;RPB=0.90082;SGB=89.1337;VDB=0.749836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D1471N|2357|LOC_Os02g58770|protein_coding|CODING|LOC_Os02g58770.1|2|1) FN774-S.SNP.2:35915298 chr02:035915298 0 W/35915298-35915298 FN774-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os02g58780 retrotransposon protein, putative, unclassified, expressed SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3520-S.SNP.2:35915813 chr02:035915813 0 W/35915813-35915813 FN3520-S SNP A -> G AC=2;AN=188;BQB=0.877317;DP=2762;DP4=1308,1335,23,14;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0264301;MQB=0.0269292;MQSB=0.593668;RPB=0.287481;SGB=79.4854;VDB=0.40228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I1066T|1379|LOC_Os02g58780|protein_coding|CODING|LOC_Os02g58780.1|5|1) FN4234-S.SNP.2:35921719 chr02:035921719 0 W/35921719-35921719 FN4234-S SNP G -> C AC=1;AN=170;BQB=0.971752;DP=2906;DP4=1416,1411,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.000344116;MQB=0.00526156;MQSB=0.990984;RPB=0.399234;SGB=38.987;VDB=0.0417261;EFF=INTERGENIC(MODIFIER||||||||||1) FN-300.SNP.2:35922079 chr02:035922079 0 W/35922079-35922079 FN-300 Single Base Substitution G-A INTERGENIC HOMO SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN4174-S.SNP.2:35928378 chr02:035928378 0 W/35928378-35928378 FN4174-S SNP C -> T AC=1;AN=170;BQB=0.991248;DP=2357;DP4=1170,1107,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.81591e-05;MQSB=0.99382;RPB=0.860223;SGB=25.6601;VDB=0.100525;EFF=INTRON(MODIFIER||||148|LOC_Os02g58790|protein_coding|CODING|LOC_Os02g58790.5|7|1),INTRON(MODIFIER||||359|LOC_Os02g58790|protein_coding|CODING|LOC_Os02g58790.1|8|1),INTRON(MODIFIER||||326|LOC_Os02g58790|protein_coding|CODING|LOC_Os02g58790.2|8|1),INTRON(MODIFIER||||233|LOC_Os02g58790|protein_coding|CODING|LOC_Os02g58790.3|7|1),INTRON(MODIFIER||||233|LOC_Os02g58790|protein_coding|CODING|LOC_Os02g58790.4|8|1) FN2657-S.SNP.2:35931594 chr02:035931594 0 W/35931594-35931594 FN2657-S SNP C -> G AC=2;AN=200;BQB=0.946069;DP=4976;DP4=2375,2256,38,44;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.40779e-45;MQSB=0.975173;RPB=0.544236;SGB=275.234;VDB=0.696156 FN429-S.SNP.3:22717 chr03:000022717 0 W/22717-22717 FN429-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2214-S.SNP.3:37628 chr03:000037628 0 W/37628-37628 FN2214-S SNP C -> T AC=1;AN=190;BQB=0.0137005;DP=4027;DP4=2052,1710,47,32;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.062081;MQB=1.3569e-19;MQSB=0;RPB=1.75344e-06;SGB=-1265.32;VDB=0.0344278;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N449|761|LOC_Os03g01050|protein_coding|CODING|LOC_Os03g01050.1|1|1) FN-145.SNP.3:39656 chr03:000039656 0 W/39656-39656 FN-145 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g01060 retrotransposon protein, putative, unclassified, expressed SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN2392.SNP.3:40357 chr03:000040357 0 W/40357-40357 FN2392 SNP G -> A AC=2;AN=200;BQB=0.845774;DP=3566;DP4=1798,1462,25,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000280426;MQB=9.34244e-16;MQSB=0.0733809;RPB=0.994228;SGB=123.188;VDB=0.594408;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A710V|1098|LOC_Os03g01060|protein_coding|CODING|LOC_Os03g01060.1|4|1) FN2447.SNP.3:41200 chr03:000041200 0 W/41200-41200 FN2447 SNP G -> A AC=1;AN=200;BQB=0.979619;DP=2471;DP4=984,1020,7,5;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0469446;MQB=0.768499;MQSB=2.30675e-06;RPB=0.98678;SGB=-16.7412;VDB=0.905761;EFF=INTRON(MODIFIER||||1098|LOC_Os03g01060|protein_coding|CODING|LOC_Os03g01060.1|3|1) FN1243-S.SNP.3:43930 chr03:000043930 0 W/43930-43930 FN1243-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2611-S.SNP.3:50437 chr03:000050437 0 W/50437-50437 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.999819;DP=5052;DP4=2611,2132,19,15;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0894695;MQB=0.81085;MQSB=6.45615e-38;RPB=0.666434;SGB=112.373;VDB=0.173253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H102Y|915|LOC_Os03g01070|protein_coding|CODING|LOC_Os03g01070.1|1|1) FN3662-S.SNP.3:105903 chr03:000105903 0 W/105903-105903 FN3662-S SNP C -> T AC=1;AN=190;BQB=0.982581;DP=2949;DP4=1504,1324,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38616e-10;MQSB=0.985357;RPB=0.966841;SGB=8.77275;VDB=0.790712;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.3:106203 chr03:000106203 0 W/106203-106203 FN1209-S Single Base Substitution A-G INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1537-S.SNP.3:119979 chr03:000119979 0 W/119979-119979 FN1537-S Single Base Substitution C-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3090-S.SNP.3:127387 chr03:000127387 0 W/127387-127387 FN3090-S SNP G -> A AC=2;AN=184;BQB=0.796307;DP=2613;DP4=1471,1031,21,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.56921e-18;MQSB=0.906476;RPB=0.349213;SGB=28.1074;VDB=0.0991001;EFF=INTRON(MODIFIER||||842|LOC_Os03g01200|protein_coding|CODING|LOC_Os03g01200.1|12|1) FN2295.SNP.3:143879 chr03:000143879 0 W/143879-143879 FN2295 SNP C -> T AC=1;AN=192;BQB=0.0745577;DP=4642;DP4=2047,2157,15,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.25657e-07;MQSB=0.878681;RPB=0.492727;SGB=-86.1887;VDB=0.124512;EFF=UTR_3_PRIME(MODIFIER||706||438|LOC_Os03g01216|protein_coding|CODING|LOC_Os03g01216.1|12|1) FN1461-S.SNP.3:148872 chr03:000148872 0 W/148872-148872 FN1461-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-345.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN-345 Single Base Substitution G-C INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN-71 Single Base Substitution G-C INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN2546-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN2546-S SNP G -> C AC=2;AN=198;BQB=0.528601;DP=4111;DP4=1990,1872,21,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.50386e-22;MQSB=0.776178;RPB=0.740827;SGB=89.0321;VDB=0.875114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN2719-S SNP G -> C AC=1;AN=200;BQB=0.601688;DP=4692;DP4=2218,2240,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.52259e-10;MQSB=0.948557;RPB=0.851955;SGB=63.4749;VDB=0.701198;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN3345-S SNP G -> C AC=2;AN=182;BQB=0.999946;DP=2829;DP4=1309,1413,11,25;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.42158e-21;MQSB=0.561743;RPB=0.998652;SGB=157.265;VDB=0.27248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN3665-S SNP G -> C AC=2;AN=190;BQB=0.347589;DP=2704;DP4=1250,1319,30,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01258e-24;MQSB=0.986101;RPB=0.508606;SGB=243.924;VDB=0.00600197;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN4063-S SNP G -> C AC=2;AN=168;BQB=0.991708;DP=2476;DP4=1146,1247,11,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.61699e-15;MQSB=0.684681;RPB=0.509519;SGB=72.4869;VDB=0.937913;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN627-S Single Base Substitution G-C INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN836-S.SNP.3:151486 chr03:000151486 0 W/151486-151486 FN836-S Single Base Substitution G-C INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W453-3-1.SNP.3:151486 chr03:000151486 0 W/151486-151486 W453-3-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN_789-3-1.SNP.3:156134 chr03:000156134 0 W/156134-156134 FN_789-3-1 Single Base Substitution A-G INTRON HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1221-S.SNP.3:165630 chr03:000165630 0 W/165630-165630 FN1221-S Single Base Substitution T-C SPLICE_SITE_DONOR HET LOC_Os03g01240 CCR4-Not complex component, Not1domain containing protein, expressed SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN479-S.SNP.3:168874 chr03:000168874 0 W/168874-168874 FN479-S Single Base Substitution A-C INTRON HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN933-S.SNP.3:176030 chr03:000176030 0 W/176030-176030 FN933-S Single Base Substitution C-G INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN934-S.SNP.3:180865 chr03:000180865 0 W/180865-180865 FN934-S Single Base Substitution T-C INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN776-S.SNP.3:182553 chr03:000182553 0 W/182553-182553 FN776-S Single Base Substitution A-G INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN4031-S.SNP.3:189039 chr03:000189039 0 W/189039-189039 FN4031-S SNP A -> G AC=1;AN=168;BQB=0.615422;DP=2741;DP4=1369,1271,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04631e-10;MQSB=0.816935;RPB=0.99506;SGB=36.7696;VDB=0.894991;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.3:191829 chr03:000191829 0 W/191829-191829 FN4271-S SNP C -> G AC=1;AN=170;BQB=0.965061;DP=2057;DP4=1004,968,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.60311e-05;MQSB=0.963843;RPB=0.811999;SGB=25.6601;VDB=0.651061;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.3:200010 chr03:000200010 0 W/200010-200010 FN414-S Single Base Substitution G-T INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2701-S.SNP.3:201258 chr03:000201258 0 W/201258-201258 FN2701-S SNP A -> T AC=1;AN=200;BQB=0.818627;DP=4560;DP4=2430,1907,13,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219298;MQB=5.01822e-09;MQSB=0.865628;RPB=0.801711;SGB=47.4799;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.3:211046 chr03:000211046 0 W/211046-211046 FN671-S Single Base Substitution C-T INTRON HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2588-S.SNP.3:222338 chr03:000222338 0 W/222338-222338 FN2588-S SNP C -> T AC=2;AN=198;BQB=0.996683;DP=3847;DP4=1851,1769,19,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.44668e-20;MQSB=0.532137;RPB=0.205825;SGB=36.4664;VDB=0.590867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.3:229737 chr03:000229737 0 W/229737-229737 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.679151;DP=4015;DP4=2039,1752,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.19723e-11;MQSB=0.00328663;RPB=0.995137;SGB=25.3006;VDB=0.286904;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.3:231348 chr03:000231348 0 W/231348-231348 FN892-S Single Base Substitution C-T INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN875-S.SNP.3:231586 chr03:000231586 0 W/231586-231586 FN875-S Single Base Substitution G-A INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN875-S.SNP.3:231587 chr03:000231587 0 W/231587-231587 FN875-S Single Base Substitution G-A INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1020-S.SNP.3:253347 chr03:000253347 0 W/253347-253347 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1009-S.SNP.3:257974 chr03:000257974 0 W/257974-257974 FN1009-S Single Base Substitution G-A INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1009-S.SNP.3:257975 chr03:000257975 0 W/257975-257975 FN1009-S Single Base Substitution C-T INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3865-S.SNP.3:258794 chr03:000258794 0 W/258794-258794 FN3865-S SNP C -> G AC=1;AN=158;BQB=0.904413;DP=2673;DP4=1168,1422,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0332959;MQB=0.0407506;MQSB=0.144091;RPB=0.169199;SGB=64.5449;VDB=0.42278;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.3:261013 chr03:000261013 0 W/261013-261013 FN3285-S SNP A -> C AC=1;AN=184;BQB=0.0670767;DP=1380;DP4=650,233,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000724638;MQB=1.94625e-05;MQSB=1.23793e-08;RPB=0.593229;SGB=-86.7396;VDB=0.0926218;EFF=INTRON(MODIFIER||||118|LOC_Os03g01340|protein_coding|CODING|LOC_Os03g01340.1|1|1) FN3375-S.SNP.3:261056 chr03:000261056 0 W/261056-261056 FN3375-S SNP C -> T AC=2;AN=184;BQB=0.556642;DP=1799;DP4=770,831,7,5;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00111173;MQB=3.29221e-05;MQSB=4.35287e-06;RPB=0.984188;SGB=48.7425;VDB=0.126318;EFF=INTRON(MODIFIER||||118|LOC_Os03g01340|protein_coding|CODING|LOC_Os03g01340.1|1|1) FN3282-S.SNP.3:262666 chr03:000262666 0 W/262666-262666 FN3282-S SNP T -> A AC=1;AN=184;BQB=0.941827;DP=2778;DP4=1337,1351,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.27144e-09;MQSB=0.993978;RPB=0.992126;SGB=66.8296;VDB=0.0922111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.3:266461 chr03:000266461 0 W/266461-266461 FN3495-S SNP T -> G AC=1;AN=188;BQB=0.981239;DP=2677;DP4=1338,1225,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.94689e-05;MQSB=0.967683;RPB=0.919835;SGB=30.8063;VDB=0.770293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.3:266633 chr03:000266633 0 W/266633-266633 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.250122;DP=4149;DP4=2117,1786,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.99086e-17;MQSB=0.914082;RPB=0.984059;SGB=52.7004;VDB=0.197401;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.3:266634 chr03:000266634 0 W/266634-266634 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.550483;DP=4150;DP4=2123,1759,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.59832e-15;MQSB=0.863342;RPB=0.988215;SGB=25.3006;VDB=0.507737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.3:268419 chr03:000268419 0 W/268419-268419 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN513-S.SNP.3:272783 chr03:000272783 0 W/272783-272783 FN513-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2794-S.SNP.3:283680 chr03:000283680 0 W/283680-283680 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.0311368;DP=3673;DP4=1698,1683,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000816771;MQB=6.99708e-05;MQSB=0.124865;RPB=0.481964;SGB=50.9344;VDB=0.757788;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G706|776|LOC_Os03g01380|protein_coding|CODING|LOC_Os03g01380.1|1|1) FN558-S.SNP.3:290118 chr03:000290118 0 W/290118-290118 FN558-S Single Base Substitution T-C INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN1399-S.SNP.3:290288 chr03:000290288 0 W/290288-290288 FN1399-S Single Base Substitution G-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1651-S.SNP.3:295595 chr03:000295595 0 W/295595-295595 FN1651-S Single Base Substitution T-C UTR_3_PRIME Homo SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN456-S.SNP.3:302620 chr03:000302620 0 W/302620-302620 FN456-S Single Base Substitution T-A INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1257-S.SNP.3:305474 chr03:000305474 0 W/305474-305474 FN1257-S Single Base Substitution G-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN4025-S.SNP.3:311567 chr03:000311567 0 W/311567-311567 FN4025-S SNP A -> G AC=1;AN=168;BQB=0.997782;DP=2771;DP4=1217,1465,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.88322e-06;MQSB=0.838618;RPB=0.859257;SGB=43.3113;VDB=0.159794;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.3:323370 chr03:000323370 0 W/323370-323370 FN479-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN906-S.SNP.3:325840 chr03:000325840 0 W/325840-325840 FN906-S Single Base Substitution G-C INTRON HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN1525-S.SNP.3:327678 chr03:000327678 0 W/327678-327678 FN1525-S Single Base Substitution A-G INTERGENIC Homo SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN525-S.SNP.3:329969 chr03:000329969 0 W/329969-329969 FN525-S Single Base Substitution T-C INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN1115-S.SNP.3:330284 chr03:000330284 0 W/330284-330284 FN1115-S Single Base Substitution C-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN-294.SNP.3:337310 chr03:000337310 0 W/337310-337310 FN-294 Single Base Substitution A-T INTRON HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN1512-S.SNP.3:346461 chr03:000346461 0 W/346461-346461 FN1512-S Single Base Substitution C-T INTRON Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3448-S.SNP.3:347479 chr03:000347479 0 W/347479-347479 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.987458;DP=2432;DP4=1244,1094,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.22124e-08;MQSB=0.963345;RPB=0.182337;SGB=57.786;VDB=0.561073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.3:350897 chr03:000350897 0 W/350897-350897 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.887398;DP=4101;DP4=1905,1987,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243843;MQB=2.90037e-10;MQSB=0.97696;RPB=0.630274;SGB=67.9293;VDB=0.856967;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C182|667|LOC_Os03g01550|protein_coding|CODING|LOC_Os03g01550.1|2|1) FN2498.SNP.3:352718 chr03:000352718 0 W/352718-352718 FN2498 SNP G -> T AC=1;AN=200;BQB=0.293505;DP=4499;DP4=1860,2226,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.45434e-14;MQSB=0.961787;RPB=0.36992;SGB=-72.2589;VDB=0.690526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.3:353757 chr03:000353757 0 W/353757-353757 FN2215-S SNP G -> T AC=1;AN=190;BQB=0.123939;DP=4474;DP4=1620,2396,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000223514;MQB=0.000104664;MQSB=0.826237;RPB=0.398234;SGB=32.5467;VDB=0.663641;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.3:361939 chr03:000361939 0 W/361939-361939 FN-292 Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-292.SNP.3:361943 chr03:000361943 0 W/361943-361943 FN-292 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN2448.SNP.3:366805 chr03:000366805 0 W/366805-366805 FN2448 SNP A -> G AC=1;AN=200;BQB=0.706516;DP=4784;DP4=2257,2206,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51605e-11;MQSB=0.818009;RPB=0.672451;SGB=12.7003;VDB=0.624511;EFF=UTR_5_PRIME(MODIFIER||422||879|LOC_Os03g01580|protein_coding|CODING|LOC_Os03g01580.1|1|1),UTR_5_PRIME(MODIFIER||422||879|LOC_Os03g01580|protein_coding|CODING|LOC_Os03g01580.2|1|1) FN522-S.SNP.3:370488 chr03:000370488 0 W/370488-370488 FN522-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN4221-S.SNP.3:376572 chr03:000376572 0 W/376572-376572 FN4221-S SNP G -> T AC=2;AN=170;BQB=0.927315;DP=2657;DP4=1287,1260,13,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.17533e-16;MQSB=0.967012;RPB=0.777428;SGB=58.9663;VDB=0.585394;EFF=INTRON(MODIFIER||||405|LOC_Os03g01600|protein_coding|CODING|LOC_Os03g01600.1|8|1) FN1557-S.SNP.3:382523 chr03:000382523 0 W/382523-382523 FN1557-S Single Base Substitution A-G INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2451.SNP.3:392728 chr03:000392728 0 W/392728-392728 FN2451 SNP A -> G AC=1;AN=200;BQB=0.118747;DP=3993;DP4=2201,1469,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000250438;MQB=2.92325e-08;MQSB=0.844887;RPB=0.855876;SGB=72.6852;VDB=0.120862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.3:405553 chr03:000405553 0 W/405553-405553 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.768515;DP=2728;DP4=1203,1430,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.23662e-05;MQSB=0.737876;RPB=0.733671;SGB=28.9929;VDB=0.938014;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.3:407405 chr03:000407405 0 W/407405-407405 FN704-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g01660 SKP1, putative, expressed SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2218-S.SNP.3:412942 chr03:000412942 0 W/412942-412942 FN2218-S SNP A -> T AC=2;AN=190;BQB=0.636437;DP=4796;DP4=2285,2215,22,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000208507;MQB=2.0369e-18;MQSB=0.917967;RPB=0.987982;SGB=158.388;VDB=0.450423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.3:426375 chr03:000426375 0 W/426375-426375 FN2412 SNP T -> G AC=1;AN=200;BQB=0.893931;DP=4876;DP4=2445,2266,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77469e-09;MQSB=0.560359;RPB=0.162731;SGB=58.8698;VDB=0.484305;EFF=INTRON(MODIFIER||||2124|LOC_Os03g01684|protein_coding|CODING|LOC_Os03g01684.1|11|1) FN-366.SNP.3:439065 chr03:000439065 0 W/439065-439065 FN-366 Single Base Substitution T-A INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-366.SNP.3:439066 chr03:000439066 0 W/439066-439066 FN-366 Single Base Substitution C-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-366.SNP.3:439067 chr03:000439067 0 W/439067-439067 FN-366 Single Base Substitution T-A INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2254-S.SNP.3:439268 chr03:000439268 0 W/439268-439268 FN2254-S SNP G -> T AC=1;AN=190;BQB=0.829425;DP=4467;DP4=1930,2174,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.14163e-11;MQSB=0.0281713;RPB=0.908448;SGB=57.4238;VDB=0.891163;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.3:445037 chr03:000445037 0 W/445037-445037 FN-124 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g01710 expressed protein SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2794-S.SNP.3:447786 chr03:000447786 0 W/447786-447786 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.374596;DP=4302;DP4=2024,2055,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01781e-12;MQSB=0.989375;RPB=0.70914;SGB=68.91;VDB=0.865279;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.3:448913 chr03:000448913 0 W/448913-448913 FN1209-S Single Base Substitution G-A INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3701-S.SNP.3:449871 chr03:000449871 0 W/449871-449871 FN3701-S SNP G -> C AC=1;AN=190;BQB=0.874778;DP=2848;DP4=1392,1336,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68634e-06;MQSB=0.951424;RPB=0.981972;SGB=53.6492;VDB=0.30927;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.3:453961 chr03:000453961 0 W/453961-453961 FN2385 SNP A -> G AC=1;AN=192;BQB=0.99986;DP=4772;DP4=2003,2475,21,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209556;MQB=3.02118e-23;MQSB=0.821513;RPB=0.979908;SGB=125.324;VDB=0.881477;EFF=INTRON(MODIFIER||||957|LOC_Os03g01720|protein_coding|CODING|LOC_Os03g01720.1|2|1) FN2194-S.SNP.3:461117 chr03:000461117 0 W/461117-461117 FN2194-S SNP G -> C AC=2;AN=190;BQB=0.996139;DP=3945;DP4=1689,1908,23,29;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.80179e-22;MQSB=0.720513;RPB=0.361972;SGB=118.153;VDB=0.150913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.3:464007 chr03:000464007 0 W/464007-464007 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.387168;DP=4831;DP4=2319,2204,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00434693;MQB=0.047252;MQSB=0;RPB=0.997482;SGB=50.3161;VDB=0.145867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.3:470091 chr03:000470091 0 W/470091-470091 FN1630-S Single Base Substitution G-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3400-S.SNP.3:485479 chr03:000485479 0 W/485479-485479 FN3400-S SNP C -> T AC=2;AN=184;BQB=0.925384;DP=2870;DP4=1028,1758,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.40309e-12;MQSB=0.938939;RPB=1;SGB=70.9657;VDB=0.994553;EFF=INTRON(MODIFIER||||258|LOC_Os03g01780|protein_coding|CODING|LOC_Os03g01780.1|1|1) FN1093-S.SNP.3:486927 chr03:000486927 0 W/486927-486927 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-131.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN-131 Single Base Substitution C-T INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-205.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN-205 Single Base Substitution C-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN1462-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN1462-S Single Base Substitution C-T INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1718-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN1718-S SNP C -> T AC=1;AN=188;BQB=0.473232;DP=2284;DP4=990,1256,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28318e-06;MQSB=0.998476;RPB=0.555176;SGB=18.4463;VDB=0.666103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN2291 SNP C -> T AC=1;AN=192;BQB=0.984336;DP=4996;DP4=2340,2293,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.58219e-18;MQSB=0.525279;RPB=0.996201;SGB=149.626;VDB=0.521436;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN3490-S SNP C -> T AC=2;AN=184;BQB=0.959851;DP=2874;DP4=1449,1335,18,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.97476e-21;MQSB=0.991452;RPB=0.944613;SGB=161.787;VDB=0.250833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.958132;DP=2855;DP4=1465,1345,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000101886;MQSB=0.962157;RPB=0.995936;SGB=35.3493;VDB=0.0387577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN3607-S SNP C -> T AC=2;AN=190;BQB=0.962189;DP=2719;DP4=1406,1206,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.4228e-14;MQSB=0.250856;RPB=0.16308;SGB=112.85;VDB=0.217505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN3889-S SNP C -> T AC=1;AN=158;BQB=0.998958;DP=2389;DP4=1216,1108,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.20273e-09;MQSB=0.933091;RPB=0.676652;SGB=64.5449;VDB=0.298056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.935102;DP=2616;DP4=1304,1196,25,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.5811e-19;MQSB=0.909678;RPB=0.469633;SGB=85.386;VDB=0.51465;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN4344-S SNP C -> T AC=2;AN=170;BQB=0.990577;DP=2590;DP4=1335,1180,18,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.41664e-14;MQSB=0.481372;RPB=0.461581;SGB=114.512;VDB=0.640416;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN441-S Single Base Substitution C-T INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN512-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN512-S Single Base Substitution C-T INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN601-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN601-S Single Base Substitution C-T INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN669-S.SNP.3:487107 chr03:000487107 0 W/487107-487107 FN669-S Single Base Substitution C-T INTERGENIC HOMO SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. W470-2-1.SNP.3:487107 chr03:000487107 0 W/487107-487107 W470-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2431.SNP.3:492014 chr03:000492014 0 W/492014-492014 FN2431 SNP T -> C AC=1;AN=200;BQB=0.745018;DP=4159;DP4=1904,1992,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93966e-10;MQSB=0.919647;RPB=0.856135;SGB=32.0901;VDB=0.999731;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S416|557|LOC_Os03g01790|protein_coding|CODING|LOC_Os03g01790.1|12|1) FN3513-S.SNP.3:494415 chr03:000494415 0 W/494415-494415 FN3513-S SNP G -> A AC=1;AN=188;BQB=0.954217;DP=2793;DP4=1188,1508,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00682e-06;MQSB=0.980489;RPB=0.932002;SGB=39.8925;VDB=0.389245;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.3:495993 chr03:000495993 0 W/495993-495993 FN724-S Single Base Substitution C-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN873-S.SNP.3:495993 chr03:000495993 0 W/495993-495993 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2265-S.SNP.3:499610 chr03:000499610 0 W/499610-499610 FN2265-S SNP G -> T AC=1;AN=190;BQB=0.919214;DP=4803;DP4=2177,2256,12,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.75184e-16;MQSB=0.836155;RPB=0.699548;SGB=27.4193;VDB=0.862326;EFF=UTR_3_PRIME(MODIFIER||242||231|LOC_Os03g01810|protein_coding|CODING|LOC_Os03g01810.1|6|1) FN1340-S.SNP.3:502103 chr03:000502103 0 W/502103-502103 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN505-S.SNP.3:520521 chr03:000520521 0 W/520521-520521 FN505-S Single Base Substitution T-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.3:520522 chr03:000520522 0 W/520522-520522 FN505-S Single Base Substitution A-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.3:520523 chr03:000520523 0 W/520523-520523 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN-73.SNP.3:522142 chr03:000522142 0 W/522142-522142 FN-73 Single Base Substitution A-G INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN-207.SNP.3:532353 chr03:000532353 0 W/532353-532353 FN-207 Single Base Substitution G-C INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2634-S.SNP.3:532718 chr03:000532718 0 W/532718-532718 FN2634-S SNP A -> T AC=1;AN=200;BQB=0.723816;DP=4409;DP4=1988,2127,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00693e-16;MQSB=0.993029;RPB=0.638272;SGB=-107.254;VDB=0.649693;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.3:532718 chr03:000532718 0 W/532718-532718 FN512-S Single Base Substitution A-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3865-S.SNP.3:534465 chr03:000534465 0 W/534465-534465 FN3865-S SNP A -> T AC=2;AN=158;BQB=0.999515;DP=3251;DP4=1389,1629,16,32;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.67803e-24;MQSB=0.889418;RPB=0.999809;SGB=99.641;VDB=0.00489085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:534669 chr03:000534669 0 W/534669-534669 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.999437;DP=3574;DP4=2029,1355,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46597e-10;MQSB=0.976351;RPB=0.990459;SGB=53.8699;VDB=0.159865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.3:546001 chr03:000546001 0 W/546001-546001 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.845527;DP=3149;DP4=1607,1442,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.72167e-07;MQSB=0.903442;RPB=0.617624;SGB=20.7533;VDB=0.157557;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.3:576452 chr03:000576452 0 W/576452-576452 W252-6-1 Single Base Substitution G-T INTRON HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2677-S.SNP.3:578272 chr03:000578272 0 W/578272-578272 FN2677-S SNP C -> T AC=1;AN=200;BQB=0.884358;DP=4824;DP4=2394,2148,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.51424e-08;MQSB=0.975717;RPB=0.536561;SGB=33.0593;VDB=0.959618;EFF=INTRON(MODIFIER||||529|LOC_Os03g01940|protein_coding|CODING|LOC_Os03g01940.1|3|1),INTRON(MODIFIER||||399|LOC_Os03g01940|protein_coding|CODING|LOC_Os03g01940.2|3|1),INTRON(MODIFIER||||529|LOC_Os03g01940|protein_coding|CODING|LOC_Os03g01940.3|3|1) W591-4-1.SNP.3:580041 chr03:000580041 0 W/580041-580041 W591-4-1 Single Base Substitution A-T INTRON HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN499-S.SNP.3:581124 chr03:000581124 0 W/581124-581124 FN499-S Single Base Substitution T-C INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2702-S.SNP.3:587919 chr03:000587919 0 W/587919-587919 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.00122843;DP=4831;DP4=2366,2230,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.989e-05;MQSB=0.993438;RPB=0.905868;SGB=-15.5309;VDB=0.989047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.3:588996 chr03:000588996 0 W/588996-588996 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.878974;DP=4980;DP4=2424,2182,18,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200803;MQB=1.56766e-18;MQSB=0.921023;RPB=0.996378;SGB=72.1834;VDB=0.512856;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.3:605542 chr03:000605542 0 W/605542-605542 FN2259-S SNP G -> A AC=1;AN=190;BQB=0.968689;DP=5032;DP4=2252,2506,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198728;MQB=4.9901e-06;MQSB=0.979734;RPB=0.237332;SGB=13.4442;VDB=0.758177;EFF=INTRON(MODIFIER||||638|LOC_Os03g01970|protein_coding|CODING|LOC_Os03g01970.1|12|1) FN1106-S.SNP.3:620220 chr03:000620220 0 W/620220-620220 FN1106-S Single Base Substitution C-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. W427-1-1.SNP.3:622883 chr03:000622883 0 W/622883-622883 W427-1-1 Single Base Substitution A-G INTRON HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-90.SNP.3:625551 chr03:000625551 0 W/625551-625551 FN-90 Single Base Substitution C-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN751-S.SNP.3:628677 chr03:000628677 0 W/628677-628677 FN751-S Single Base Substitution G-A INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN751-S.SNP.3:628679 chr03:000628679 0 W/628679-628679 FN751-S Single Base Substitution G-A INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2575-S.SNP.3:637134 chr03:000637134 0 W/637134-637134 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.631426;DP=4486;DP4=1989,2173,19,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.99058e-20;MQSB=0.787511;RPB=0.960983;SGB=42.8469;VDB=0.60017;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G62|289|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.2|2|1),UTR_5_PRIME(MODIFIER||334||200|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.1|2|1),UTR_5_PRIME(MODIFIER||624||133|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.4|2|1),UTR_5_PRIME(MODIFIER||624||133|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.3|2|1),UTR_5_PRIME(MODIFIER||624||133|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.5|2|1),UTR_5_PRIME(MODIFIER||624||133|LOC_Os03g02020|protein_coding|CODING|LOC_Os03g02020.6|2|1) FN-370.SNP.3:646241 chr03:000646241 0 W/646241-646241 FN-370 Single Base Substitution T-G INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2621-S.SNP.3:665035 chr03:000665035 0 W/665035-665035 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.575254;DP=5225;DP4=2263,2630,13,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.96537e-21;MQSB=0.801719;RPB=0.372874;SGB=108.768;VDB=0.930312;EFF=INTRON(MODIFIER||||575|LOC_Os03g02090|protein_coding|CODING|LOC_Os03g02090.1|1|1) FN3831-S.SNP.3:674597 chr03:000674597 0 W/674597-674597 FN3831-S SNP G -> C AC=1;AN=190;BQB=0.344052;DP=2786;DP4=1638,1011,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.43055e-11;MQSB=0.906931;RPB=0.67187;SGB=44.0907;VDB=0.945383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.3:677160 chr03:000677160 0 W/677160-677160 FN1382-S Single Base Substitution T-C INTRON HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4189-S.SNP.3:679989 chr03:000679989 0 W/679989-679989 FN4189-S SNP A -> T AC=1;AN=170;BQB=0.979811;DP=2607;DP4=1348,1182,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.29798e-10;MQSB=0.997607;RPB=0.867634;SGB=45.206;VDB=0.284847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cTt|H1040L|1331|LOC_Os03g02110|protein_coding|CODING|LOC_Os03g02110.1|18|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cTt|H1040L|1315|LOC_Os03g02110|protein_coding|CODING|LOC_Os03g02110.2|18|1) FN3507-S.SNP.3:684162 chr03:000684162 0 W/684162-684162 FN3507-S SNP A -> G AC=1;AN=188;BQB=0.972777;DP=2794;DP4=1389,1337,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.193987;MQB=0.918392;MQSB=1.46879e-11;RPB=0.424408;SGB=48.979;VDB=0.188189;EFF=INTRON(MODIFIER||||827|LOC_Os03g02120|protein_coding|CODING|LOC_Os03g02120.1|2|1) FN1031-S.SNP.3:688287 chr03:000688287 0 W/688287-688287 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2593-S.SNP.3:692961 chr03:000692961 0 W/692961-692961 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.975055;DP=4451;DP4=2077,2126,14,22;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0204448;MQB=0.072904;MQSB=1.3057e-22;RPB=0.999817;SGB=119.242;VDB=0.944966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.3:695228 chr03:000695228 0 W/695228-695228 FN1221-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g02140 transposon protein, putative, unclassified, expressed SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1221-S.SNP.3:695229 chr03:000695229 0 W/695229-695229 FN1221-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g02140 transposon protein, putative, unclassified, expressed SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3902-S.SNP.3:698138 chr03:000698138 0 W/698138-698138 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.999993;DP=2537;DP4=1432,1016,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.06876e-06;MQSB=0.784472;RPB=0.642687;SGB=47.0672;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.3:702905 chr03:000702905 0 W/702905-702905 FN4344-S SNP A -> G AC=1;AN=170;BQB=0.967583;DP=2530;DP4=1248,1217,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.26999e-07;MQSB=0.869057;RPB=0.98794;SGB=47.8722;VDB=0.361025;EFF=INTRON(MODIFIER||||993|LOC_Os03g02150|protein_coding|CODING|LOC_Os03g02150.1|11|1),INTRON(MODIFIER||||922|LOC_Os03g02150|protein_coding|CODING|LOC_Os03g02150.2|11|1) FN950-S.SNP.3:708464 chr03:000708464 0 W/708464-708464 FN950-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2612-S.SNP.3:711061 chr03:000711061 0 W/711061-711061 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.956169;DP=4614;DP4=2316,1906,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.7157e-16;MQSB=0.919566;RPB=0.928328;SGB=-40.6893;VDB=0.246242;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.3:714588 chr03:000714588 0 W/714588-714588 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.986753;DP=2653;DP4=1329,1268,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.28151e-07;MQSB=0.930531;RPB=0.316554;SGB=43.4296;VDB=0.265497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.3:718682 chr03:000718682 0 W/718682-718682 FN4255-S SNP C -> T AC=1;AN=170;BQB=0.418969;DP=2540;DP4=1312,1158,13,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.41051e-08;MQSB=0.929637;RPB=0.85086;SGB=58.9766;VDB=0.754634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T395I|831|LOC_Os03g02160|protein_coding|CODING|LOC_Os03g02160.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T395I|815|LOC_Os03g02160|protein_coding|CODING|LOC_Os03g02160.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T395I|832|LOC_Os03g02160|protein_coding|CODING|LOC_Os03g02160.3|1|1) FN982-S.SNP.3:719845 chr03:000719845 0 W/719845-719845 FN982-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g02160 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN4050-S.SNP.3:725132 chr03:000725132 0 W/725132-725132 FN4050-S SNP G -> A AC=2;AN=168;BQB=0.790235;DP=2609;DP4=1273,1201,27,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.39724e-19;MQSB=0.872618;RPB=0.964819;SGB=185.097;VDB=0.210753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R10C|689|LOC_Os03g02170|protein_coding|CODING|LOC_Os03g02170.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R10C|627|LOC_Os03g02170|protein_coding|CODING|LOC_Os03g02170.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R10C|661|LOC_Os03g02170|protein_coding|CODING|LOC_Os03g02170.2|1|1) FN3285-S.SNP.3:725424 chr03:000725424 0 W/725424-725424 FN3285-S SNP T -> A AC=1;AN=184;BQB=0.983371;DP=3936;DP4=1769,1958,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07685e-11;MQSB=0.539675;RPB=0.773214;SGB=-12.1051;VDB=0.693386;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.3:725730 chr03:000725730 0 W/725730-725730 FN1065-S Single Base Substitution G-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN623-S.SNP.3:725967 chr03:000725967 0 W/725967-725967 FN623-S Single Base Substitution C-T INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN623-S.SNP.3:725969 chr03:000725969 0 W/725969-725969 FN623-S Single Base Substitution A-G INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2483.SNP.3:742182 chr03:000742182 0 W/742182-742182 FN2483 SNP A -> G AC=1;AN=200;BQB=0.772672;DP=4814;DP4=2608,1898,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207727;MQB=3.45609e-12;MQSB=0.987847;RPB=0.179497;SGB=39.9056;VDB=0.146678;EFF=INTRON(MODIFIER||||443|LOC_Os03g02210|protein_coding|CODING|LOC_Os03g02210.1|2|1) FN3711-S.SNP.3:754254 chr03:000754254 0 W/754254-754254 FN3711-S SNP A -> G AC=2;AN=190;BQB=0.293363;DP=1529;DP4=707,643,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.11381e-07;MQSB=0.999282;RPB=0.95606;SGB=10.3266;VDB=0.95679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M261T|725|LOC_Os03g02240|protein_coding|CODING|LOC_Os03g02240.1|2|1) FN3417-S.SNP.3:757062 chr03:000757062 0 W/757062-757062 FN3417-S SNP G -> T AC=1;AN=184;BQB=0.996985;DP=2684;DP4=1428,1133,9,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000372578;MQB=5.17066e-06;MQSB=0.973514;RPB=0.873728;SGB=28.7043;VDB=0.130593;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:758046 chr03:000758046 0 W/758046-758046 FN2752-S SNP T -> A AC=2;AN=200;BQB=0.95678;DP=4775;DP4=2270,2259,11,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01356e-19;MQSB=0.748383;RPB=0.32143;SGB=101.557;VDB=0.0803921;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.3:763340 chr03:000763340 0 W/763340-763340 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN4150-S.SNP.3:765266 chr03:000765266 0 W/765266-765266 FN4150-S SNP T -> G AC=1;AN=170;BQB=0.831622;DP=2159;DP4=1042,1034,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.24685e-12;MQSB=0.977276;RPB=0.900796;SGB=87.856;VDB=0.45365;EFF=INTERGENIC(MODIFIER||||||||||1) FN-20.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN-20 Single Base Substitution G-A STOP_GAINED Homo LOC_Os03g02260 DnaK family protein, putative, expressed SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1631-S.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN1631-S Single Base Substitution G-A STOP_GAINED HET LOC_Os03g02260 DnaK family protein, putative, expressed SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2323.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN2323 SNP G -> A AC=2;AN=192;BQB=0.856152;DP=4548;DP4=2029,2205,16,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.68908e-21;MQSB=0.988417;RPB=0.785167;SGB=-0.0956204;VDB=0.430121;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q645*|676|LOC_Os03g02260|protein_coding|CODING|LOC_Os03g02260.1|6|1) FN4104-S.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN4104-S SNP G -> A AC=1;AN=182;BQB=0.965477;DP=3156;DP4=1652,1441,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.92593e-07;MQSB=0.998242;RPB=0.965218;SGB=44.1115;VDB=0.0387809;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q645*|676|LOC_Os03g02260|protein_coding|CODING|LOC_Os03g02260.1|6|1) FN496-S.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN496-S Single Base Substitution G-A STOP_GAINED HET LOC_Os03g02260 DnaK family protein, putative, expressed SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN740-S.SNP.3:767187 chr03:000767187 0 W/767187-767187 FN740-S Single Base Substitution G-A STOP_GAINED HET LOC_Os03g02260 DnaK family protein, putative, expressed SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN1349-S.SNP.3:767189 chr03:000767189 0 W/767189-767189 FN1349-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g02260 DnaK family protein, putative, expressed SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN964-S.SNP.3:769673 chr03:000769673 0 W/769673-769673 FN964-S Single Base Substitution A-C INTRON HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-345.SNP.3:774768 chr03:000774768 0 W/774768-774768 FN-345 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g02270 expressed protein SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2715-S.SNP.3:775519 chr03:000775519 0 W/775519-775519 FN2715-S SNP T -> G AC=1;AN=200;BQB=0.999255;DP=4959;DP4=2399,2327,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2705e-15;MQSB=0.989929;RPB=0.539803;SGB=90.7419;VDB=0.332661;EFF=INTRON(MODIFIER||||482|LOC_Os03g02270|protein_coding|CODING|LOC_Os03g02270.1|10|1) FN354-S.SNP.3:792414 chr03:000792414 0 W/792414-792414 FN354-S Single Base Substitution A-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN980-S.SNP.3:799721 chr03:000799721 0 W/799721-799721 FN980-S Single Base Substitution C-T INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.3:799727 chr03:000799727 0 W/799727-799727 FN980-S Single Base Substitution A-G INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-104.SNP.3:806746 chr03:000806746 0 W/806746-806746 FN-104 Single Base Substitution A-T INTRON HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3454-S.SNP.3:812023 chr03:000812023 0 W/812023-812023 FN3454-S SNP G -> A AC=1;AN=184;BQB=0.661513;DP=2925;DP4=1510,1316,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.3958e-05;MQSB=0.976535;RPB=0.304181;SGB=32.2261;VDB=0.358505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.3:843553 chr03:000843553 0 W/843553-843553 FN2272-S SNP A -> G AC=1;AN=190;BQB=0.719749;DP=5528;DP4=2791,2477,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98299e-11;MQSB=0.540789;RPB=0.266929;SGB=60.9777;VDB=0.717552;EFF=INTRON(MODIFIER||||457|LOC_Os03g02380|protein_coding|CODING|LOC_Os03g02380.1|3|1),INTRON(MODIFIER||||434|LOC_Os03g02380|protein_coding|CODING|LOC_Os03g02380.2|3|1) FN3799-S.SNP.3:876136 chr03:000876136 0 W/876136-876136 FN3799-S SNP G -> C AC=1;AN=190;BQB=0.95741;DP=2389;DP4=1201,1110,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89899e-07;MQSB=0.973559;RPB=0.887168;SGB=44.5415;VDB=0.98893;EFF=UTR_3_PRIME(MODIFIER||1178||746|LOC_Os03g02440|protein_coding|CODING|LOC_Os03g02440.1|7|1),UTR_3_PRIME(MODIFIER||1178||746|LOC_Os03g02440|protein_coding|CODING|LOC_Os03g02440.2|8|1) FN898-S.SNP.3:878269 chr03:000878269 0 W/878269-878269 FN898-S Single Base Substitution C-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2791-S.SNP.3:882858 chr03:000882858 0 W/882858-882858 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.926555;DP=4001;DP4=1977,1810,19,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17241e-17;MQSB=0.86861;RPB=0.98222;SGB=141.451;VDB=0.531966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.3:883066 chr03:000883066 0 W/883066-883066 FN3757-S SNP T -> C AC=1;AN=190;BQB=0.836757;DP=2703;DP4=1417,1159,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21746e-09;MQSB=0.828511;RPB=0.918383;SGB=58.2031;VDB=0.15051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1216-S.SNP.3:889629 chr03:000889629 0 W/889629-889629 FN1216-S Single Base Substitution C-T INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1240-S.SNP.3:892366 chr03:000892366 0 W/892366-892366 FN1240-S Single Base Substitution G-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2376.SNP.3:894312 chr03:000894312 0 W/894312-894312 FN2376 SNP A -> G AC=2;AN=192;BQB=0.988088;DP=4750;DP4=1996,2324,10,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.18459e-12;MQSB=0.996597;RPB=0.735085;SGB=21.4339;VDB=0.0347662;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.3:895215 chr03:000895215 0 W/895215-895215 FN-150 Single Base Substitution A-G INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN-150.SNP.3:895216 chr03:000895216 0 W/895216-895216 FN-150 Single Base Substitution A-T INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2794-S.SNP.3:896284 chr03:000896284 0 W/896284-896284 FN2794-S SNP C -> G AC=1;AN=198;BQB=0.54894;DP=4392;DP4=2354,1827,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.28955e-10;MQSB=0.942249;RPB=0.902126;SGB=86.3098;VDB=0.934346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.3:896359 chr03:000896359 0 W/896359-896359 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.503064;DP=4379;DP4=2293,1802,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000228363;MQB=8.38317e-16;MQSB=0.987738;RPB=0.084975;SGB=60.4858;VDB=0.143217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.3:899736 chr03:000899736 0 W/899736-899736 FN2380 SNP G -> A AC=1;AN=192;BQB=0.855304;DP=4820;DP4=2385,2205,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.31131e-11;MQSB=0.967784;RPB=0.320809;SGB=39.1713;VDB=0.322864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.3:902142 chr03:000902142 0 W/902142-902142 FN2682-S SNP A -> T AC=1;AN=200;BQB=0.999967;DP=4782;DP4=2141,2423,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.24114e-06;MQSB=0.941398;RPB=0.69716;SGB=45.0543;VDB=0.984602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.3:902280 chr03:000902280 0 W/902280-902280 FN2670-S SNP A -> G AC=1;AN=200;BQB=0.999959;DP=5132;DP4=2666,2318,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.5077e-11;MQSB=0.974047;RPB=0.998036;SGB=58.2954;VDB=0.848579;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.3:911669 chr03:000911669 0 W/911669-911669 FN2449 SNP T -> C AC=2;AN=200;BQB=0.972743;DP=4697;DP4=2174,2309,21,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.45147e-18;MQSB=0.355595;RPB=0.938904;SGB=123.188;VDB=0.0279636;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.3:911858 chr03:000911858 0 W/911858-911858 FN-206 Single Base Substitution C-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3429-S.SNP.3:914078 chr03:000914078 0 W/914078-914078 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.998179;DP=3419;DP4=1451,1874,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.53023e-10;MQSB=0.903626;RPB=0.354521;SGB=62.3078;VDB=0.87171;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.3:923696 chr03:000923696 0 W/923696-923696 FN833-S Single Base Substitution G-A INTRON HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3311-S.SNP.3:925479 chr03:000925479 0 W/925479-925479 FN3311-S SNP T -> A AC=1;AN=184;BQB=0.351555;DP=3412;DP4=1520,1680,22,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.0623e-15;MQSB=0.134982;RPB=0.211473;SGB=-3.23467;VDB=0.543629;EFF=INTRON(MODIFIER||||357|LOC_Os03g02514|protein_coding|CODING|LOC_Os03g02514.1|1|1) FN4141-S.SNP.3:935395 chr03:000935395 0 W/935395-935395 FN4141-S SNP C -> A AC=1;AN=170;BQB=0.998381;DP=2771;DP4=1423,1288,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.98088e-13;MQSB=0.960471;RPB=0.433529;SGB=83.4133;VDB=0.777974;EFF=UTR_3_PRIME(MODIFIER||64||441|LOC_Os03g02540|protein_coding|CODING|LOC_Os03g02540.1|6|1) FN-173.SNP.3:942337 chr03:000942337 0 W/942337-942337 FN-173 Single Base Substitution T-C INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2347.SNP.3:949961 chr03:000949961 0 W/949961-949961 FN2347 SNP G -> A AC=1;AN=192;BQB=0.458078;DP=4967;DP4=2317,2331,16,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.39059e-20;MQSB=0.993303;RPB=0.373153;SGB=-1.78867;VDB=0.651665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.3:953314 chr03:000953314 0 W/953314-953314 FN2200-S SNP T -> C AC=1;AN=190;BQB=0.243627;DP=4952;DP4=2641,1993,16,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.86349e-15;MQSB=0.980277;RPB=0.908035;SGB=121.957;VDB=0.140987;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.3:965832 chr03:000965832 0 W/965832-965832 FN552-S Single Base Substitution G-A INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2177-S.SNP.3:973728 chr03:000973728 0 W/973728-973728 FN2177-S SNP A -> T AC=2;AN=168;BQB=0.378627;DP=4165;DP4=1686,2414,11,18;HOB=0.0235261;ICB=0.494119;MQ=18;MQ0F=0.353661;MQB=0.81559;MQSB=0;RPB=0.502383;SGB=-44.0584;VDB=0.106239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.3:973729 chr03:000973729 0 W/973729-973729 FN2177-S SNP C -> T AC=2;AN=168;BQB=0.0251756;DP=4156;DP4=1674,2419,11,22;HOB=0.0235261;ICB=0.494119;MQ=18;MQ0F=0.354668;MQB=0.945327;MQSB=0;RPB=0.782135;SGB=-158.61;VDB=0.338681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.3:982835 chr03:000982835 0 W/982835-982835 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3905-S.SNP.3:988470 chr03:000988470 0 W/988470-988470 FN3905-S SNP A -> G AC=1;AN=158;BQB=0.886541;DP=2383;DP4=1208,1086,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.23773e-07;MQSB=0.965081;RPB=0.0364232;SGB=55.806;VDB=0.0969615;EFF=INTRON(MODIFIER||||454|LOC_Os03g02660|protein_coding|CODING|LOC_Os03g02660.1|2|1) FN1468-S.SNP.3:1003855 chr03:001003855 0 W/1003855-1003855 FN1468-S Single Base Substitution T-A INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN3316-S.SNP.3:1003855 chr03:001003855 0 W/1003855-1003855 FN3316-S SNP T -> A AC=1;AN=184;BQB=0.948693;DP=2823;DP4=1405,1242,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.593e-11;MQSB=0.775312;RPB=0.984496;SGB=-13.1487;VDB=0.469001;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.3:1003855 chr03:001003855 0 W/1003855-1003855 FN_815-4-1 Single Base Substitution T-A Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN4082-S.SNP.3:1003856 chr03:001003856 0 W/1003856-1003856 FN4082-S SNP A -> T AC=1;AN=182;BQB=0.938831;DP=2924;DP4=1450,1308,5,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.43829e-07;MQSB=0.300713;RPB=0.994434;SGB=25.655;VDB=0.0470851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.3:1008107 chr03:001008107 0 W/1008107-1008107 FN2360 SNP C -> A AC=1;AN=192;BQB=0.954226;DP=4561;DP4=2072,2209,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91795e-12;MQSB=0.658296;RPB=0.874192;SGB=36.607;VDB=0.997949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.3:1009729 chr03:001009729 0 W/1009729-1009729 FN1080-S Single Base Substitution T-C INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1080-S.SNP.3:1009749 chr03:001009749 0 W/1009749-1009749 FN1080-S Single Base Substitution A-T INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2631-S.SNP.3:1013561 chr03:001013561 0 W/1013561-1013561 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.638318;DP=4871;DP4=2294,2255,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.45659e-14;MQSB=0.099124;RPB=0.991615;SGB=83.5316;VDB=0.765963;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.3:1014561 chr03:001014561 0 W/1014561-1014561 FN499-S Single Base Substitution G-A INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2574-S.SNP.3:1019154 chr03:001019154 0 W/1019154-1019154 FN2574-S SNP T -> A AC=2;AN=198;BQB=0.848127;DP=4165;DP4=1947,2022,11,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.3249e-12;MQSB=0.858004;RPB=0.613042;SGB=65.3149;VDB=0.532113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V308D|463|LOC_Os03g02710|protein_coding|CODING|LOC_Os03g02710.1|10|1) FN479-S.SNP.3:1019210 chr03:001019210 0 W/1019210-1019210 FN479-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g02710 hydroxymethylglutaryl-CoA synthase, putative, expressed SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1635-S.SNP.3:1019528 chr03:001019528 0 W/1019528-1019528 FN1635-S SNP G -> T AC=1;AN=188;BQB=0.550745;DP=3494;DP4=1367,2097,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.35774e-08;MQSB=0.869915;RPB=0.999301;SGB=26.0762;VDB=0.881008;EFF=SPLICE_SITE_REGION(LOW||||463|LOC_Os03g02710|protein_coding|CODING|LOC_Os03g02710.1|11|1),INTRON(MODIFIER||||463|LOC_Os03g02710|protein_coding|CODING|LOC_Os03g02710.1|11|1) FN-135.SNP.3:1020052 chr03:001020052 0 W/1020052-1020052 FN-135 Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN701-S.SNP.3:1020052 chr03:001020052 0 W/1020052-1020052 FN701-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2779-S.SNP.3:1020105 chr03:001020105 0 W/1020105-1020105 FN2779-S SNP T -> C AC=1;AN=198;BQB=0.767513;DP=4257;DP4=1733,2233,8,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.27643e-13;MQSB=0.919489;RPB=0.553295;SGB=76.1002;VDB=0.756425;EFF=UTR_3_PRIME(MODIFIER||277||463|LOC_Os03g02710|protein_coding|CODING|LOC_Os03g02710.1|12|1) FN-118.SNP.3:1022597 chr03:001022597 0 W/1022597-1022597 FN-118 Single Base Substitution C-A INTRON HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN3731-S.SNP.3:1027327 chr03:001027327 0 W/1027327-1027327 FN3731-S SNP T -> A AC=1;AN=190;BQB=0.591325;DP=2673;DP4=1518,1030,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.25112e-06;MQSB=0.943451;RPB=0.554839;SGB=53.6492;VDB=0.917844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.3:1028132 chr03:001028132 0 W/1028132-1028132 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.332824;DP=4676;DP4=2292,2009,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74353e-09;MQSB=0.352451;RPB=0.913004;SGB=21.6694;VDB=0.441075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P804S|904|LOC_Os03g02740|protein_coding|CODING|LOC_Os03g02740.1|9|1) FN2677-S.SNP.3:1028134 chr03:001028134 0 W/1028134-1028134 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.956622;DP=4648;DP4=2295,2058,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.33303e-09;MQSB=0.171493;RPB=0.994293;SGB=36.6644;VDB=0.359369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A803V|904|LOC_Os03g02740|protein_coding|CODING|LOC_Os03g02740.1|9|1) FN3432-S.SNP.3:1031935 chr03:001031935 0 W/1031935-1031935 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.964291;DP=3130;DP4=1489,1523,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0738e-12;MQSB=0.99297;RPB=0.678525;SGB=40.9276;VDB=0.155754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.3:1032022 chr03:001032022 0 W/1032022-1032022 FN1018-S Single Base Substitution C-G INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN3631-S.SNP.3:1032533 chr03:001032533 0 W/1032533-1032533 FN3631-S SNP C -> A AC=1;AN=190;BQB=0.966671;DP=2717;DP4=1182,1442,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.53176e-07;MQSB=0.979188;RPB=0.819731;SGB=25.439;VDB=0.889652;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.3:1034319 chr03:001034319 0 W/1034319-1034319 FN494-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g02750 OsSub25 - Putative Subtilisin homologue, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-93.SNP.3:1038411 chr03:001038411 0 W/1038411-1038411 FN-93 Single Base Substitution G-A INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1512-S.SNP.3:1038935 chr03:001038935 0 W/1038935-1038935 FN1512-S Single Base Substitution C-G INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN458-S.SNP.3:1040070 chr03:001040070 0 W/1040070-1040070 FN458-S Single Base Substitution G-A INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN3292-S.SNP.3:1045883 chr03:001045883 0 W/1045883-1045883 FN3292-S SNP C -> A AC=1;AN=184;BQB=0.921881;DP=3565;DP4=1514,1922,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.5128e-09;MQSB=0.967735;RPB=0.685877;SGB=53.3568;VDB=0.0650137;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.3:1049098 chr03:001049098 0 W/1049098-1049098 FN1112-S Single Base Substitution C-G INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN933-S.SNP.3:1053666 chr03:001053666 0 W/1053666-1053666 FN933-S Single Base Substitution G-C INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3489-S.SNP.3:1060504 chr03:001060504 0 W/1060504-1060504 FN3489-S SNP T -> A AC=1;AN=184;BQB=0.950569;DP=2721;DP4=1304,1324,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78741e-07;MQSB=0.999046;RPB=0.910822;SGB=44.2207;VDB=0.317696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.3:1063870 chr03:001063870 0 W/1063870-1063870 FN2200-S SNP G -> A AC=2;AN=190;BQB=0.937409;DP=5024;DP4=2263,2430,18,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.11516e-24;MQSB=0.999982;RPB=0.965974;SGB=95.1683;VDB=0.792599;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.3:1067622 chr03:001067622 0 W/1067622-1067622 FN1543-S Single Base Substitution T-A INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN4151-S.SNP.3:1067770 chr03:001067770 0 W/1067770-1067770 FN4151-S SNP C -> A AC=1;AN=170;BQB=0.999277;DP=2606;DP4=1444,1051,16,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04849e-11;MQSB=0.807813;RPB=0.705276;SGB=58.9766;VDB=0.799558;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.3:1080996 chr03:001080996 0 W/1080996-1080996 FN718-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1317-S.SNP.3:1083006 chr03:001083006 0 W/1083006-1083006 FN1317-S Single Base Substitution G-A INTRON HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2137-S.SNP.3:1097091 chr03:001097091 0 W/1097091-1097091 FN2137-S SNP C -> A AC=2;AN=168;BQB=0.980609;DP=2831;DP4=1196,1581,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28483e-19;MQSB=0.99998;RPB=0.772533;SGB=-99.4518;VDB=0.778463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.3:1098562 chr03:001098562 0 W/1098562-1098562 FN2200-S SNP G -> C AC=1;AN=190;BQB=0.754436;DP=4837;DP4=2232,2265,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23892e-08;MQSB=0.957204;RPB=0.936551;SGB=85.5263;VDB=0.2835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.3:1102155 chr03:001102155 0 W/1102155-1102155 FN2483 SNP T -> A AC=1;AN=200;BQB=0.99608;DP=4696;DP4=2113,2338,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212947;MQB=7.6556e-08;MQSB=0.0621563;RPB=0.999885;SGB=51.0851;VDB=0.676684;EFF=INTRON(MODIFIER||||450|LOC_Os03g02820|protein_coding|CODING|LOC_Os03g02820.1|8|1),INTRON(MODIFIER||||215|LOC_Os03g02820|protein_coding|CODING|LOC_Os03g02820.2|6|1) FN2491.SNP.3:1116525 chr03:001116525 0 W/1116525-1116525 FN2491 SNP T -> G AC=2;AN=200;BQB=0.465824;DP=4454;DP4=2178,1985,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.02419e-24;MQSB=0.989064;RPB=0.540227;SGB=141.214;VDB=0.829509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.3:1117556 chr03:001117556 0 W/1117556-1117556 FN2676-S SNP G -> T AC=1;AN=200;BQB=0.999861;DP=4825;DP4=2286,2277,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18967e-09;MQSB=0.993427;RPB=0.966069;SGB=26.8797;VDB=0.802788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.3:1131803 chr03:001131803 0 W/1131803-1131803 FN1477-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2333.SNP.3:1161476 chr03:001161476 0 W/1161476-1161476 FN2333 SNP C -> T AC=1;AN=192;BQB=0.956766;DP=5076;DP4=2371,2391,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.55906e-12;MQSB=0.683355;RPB=0.990043;SGB=-65.9365;VDB=0.0622914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1459-S.SNP.3:1163150 chr03:001163150 0 W/1163150-1163150 FN1459-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN-210.SNP.3:1180569 chr03:001180569 0 W/1180569-1180569 FN-210 Single Base Substitution G-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3913-S.SNP.3:1180640 chr03:001180640 0 W/1180640-1180640 FN3913-S SNP C -> A AC=1;AN=158;BQB=0.640694;DP=2949;DP4=1576,1220,12,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.44999e-10;MQSB=0.908317;RPB=0.9897;SGB=64.3985;VDB=0.0810929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.3:1183475 chr03:001183475 0 W/1183475-1183475 FN3421-S SNP G -> T AC=1;AN=184;BQB=0.929055;DP=2954;DP4=1346,1534,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.58398e-06;MQSB=0.991811;RPB=0.380665;SGB=8.14452;VDB=0.924608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.3:1187642 chr03:001187642 0 W/1187642-1187642 FN1162-S Single Base Substitution G-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1320-S.SNP.3:1189726 chr03:001189726 0 W/1189726-1189726 FN1320-S Single Base Substitution C-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN508-S.SNP.3:1189726 chr03:001189726 0 W/1189726-1189726 FN508-S Single Base Substitution C-G INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN2386.SNP.3:1189750 chr03:001189750 0 W/1189750-1189750 FN2386 SNP G -> A AC=1;AN=192;BQB=0.682373;DP=4873;DP4=2166,2262,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.000109802;MQSB=0.846343;RPB=0.3428;SGB=29.087;VDB=0.48517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.3:1198810 chr03:001198810 0 W/1198810-1198810 FN3064-S SNP G -> T AC=1;AN=184;BQB=0.993231;DP=3153;DP4=1529,1498,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.30858e-14;MQSB=0.954249;RPB=0.967926;SGB=67.4439;VDB=0.959899;EFF=INTRON(MODIFIER||||1883|LOC_Os03g02970|protein_coding|CODING|LOC_Os03g02970.1|14|1) FN2529-S.SNP.3:1200139 chr03:001200139 0 W/1200139-1200139 FN2529-S SNP T -> A AC=1;AN=198;BQB=0.999107;DP=4592;DP4=2176,2112,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.18647e-07;MQSB=0.979442;RPB=0.524261;SGB=32.9588;VDB=0.399491;EFF=INTRON(MODIFIER||||1883|LOC_Os03g02970|protein_coding|CODING|LOC_Os03g02970.1|10|1) FN2355.SNP.3:1203303 chr03:001203303 0 W/1203303-1203303 FN2355 SNP T -> A AC=1;AN=192;BQB=0.907637;DP=5009;DP4=2544,2151,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.10667e-14;MQSB=0.997994;RPB=0.995576;SGB=-7.43215;VDB=0.826345;EFF=INTRON(MODIFIER||||1883|LOC_Os03g02970|protein_coding|CODING|LOC_Os03g02970.1|1|1) FN2113-S.SNP.3:1209464 chr03:001209464 0 W/1209464-1209464 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.892998;DP=4022;DP4=2142,1827,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.85142e-17;MQSB=0.995996;RPB=0.669883;SGB=56.2162;VDB=0.129122;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.3:1209684 chr03:001209684 0 W/1209684-1209684 FN937-S Single Base Substitution G-T INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN4150-S.SNP.3:1210088 chr03:001210088 0 W/1210088-1210088 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.955854;DP=2479;DP4=1295,1073,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.50793e-09;MQSB=0.908776;RPB=0.87913;SGB=74.528;VDB=0.616795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.3:1231351 chr03:001231351 0 W/1231351-1231351 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1152-S.SNP.3:1238785 chr03:001238785 0 W/1238785-1238785 FN1152-S Single Base Substitution A-G INTRON HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN3916-S.SNP.3:1242000 chr03:001242000 0 W/1242000-1242000 FN3916-S SNP G -> A AC=2;AN=158;BQB=0.968712;DP=2640;DP4=1109,1417,16,10;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.017803;MQB=1.17167e-05;MQSB=0.615142;RPB=0.725277;SGB=77.8763;VDB=0.115384;EFF=INTRON(MODIFIER||||342|LOC_Os03g03034|protein_coding|CODING|LOC_Os03g03034.1|2|1),INTRON(MODIFIER||||272|LOC_Os03g03034|protein_coding|CODING|LOC_Os03g03034.2|2|1),INTRON(MODIFIER||||286|LOC_Os03g03034|protein_coding|CODING|LOC_Os03g03034.4|1|1) FN3790-S.SNP.3:1255138 chr03:001255138 0 W/1255138-1255138 FN3790-S SNP A -> T AC=1;AN=190;BQB=0.690351;DP=2719;DP4=1386,1132,8,1;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00034254;MQSB=0.406424;RPB=0.99986;SGB=35.4339;VDB=0.912856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.3:1257839 chr03:001257839 0 W/1257839-1257839 FN3371-S SNP G -> A AC=2;AN=184;BQB=0.919057;DP=2534;DP4=1070,1367,6,20;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0;MQB=8.03325e-08;MQSB=2.27814e-09;RPB=0.383479;SGB=81.5311;VDB=0.0303828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.3:1270478 chr03:001270478 0 W/1270478-1270478 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.0813566;DP=3945;DP4=1965,1785,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000253485;MQB=2.49281e-06;MQSB=0.472392;RPB=0.988356;SGB=36.5539;VDB=0.328744;EFF=UTR_3_PRIME(MODIFIER||90||151|LOC_Os03g03070|protein_coding|CODING|LOC_Os03g03070.1|6|1) FN770-S.SNP.3:1283290 chr03:001283290 0 W/1283290-1283290 FN770-S Single Base Substitution T-A INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3415-S.SNP.3:1286383 chr03:001286383 0 W/1286383-1286383 FN3415-S SNP T -> A AC=1;AN=184;BQB=0.417148;DP=2738;DP4=1366,1316,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.53199e-06;MQSB=0.126629;RPB=0.982626;SGB=53.2642;VDB=0.679568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.3:1299933 chr03:001299933 0 W/1299933-1299933 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.511638;DP=2318;DP4=936,1281,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.32584e-05;MQSB=0.861651;RPB=0.980306;SGB=28.9929;VDB=0.949761;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M8I|116|LOC_Os03g03100|protein_coding|CODING|LOC_Os03g03100.1|2|1) FN2419.SNP.3:1308732 chr03:001308732 0 W/1308732-1308732 FN2419 SNP A -> T AC=1;AN=200;BQB=0.639309;DP=4567;DP4=2074,2171,16,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0745e-13;MQSB=0.991107;RPB=0.846815;SGB=68.5625;VDB=0.938051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.3:1337746 chr03:001337746 0 W/1337746-1337746 FN1036-S Single Base Substitution T-C INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN2118-S.SNP.3:1337746 chr03:001337746 0 W/1337746-1337746 FN2118-S SNP T -> C AC=2;AN=168;BQB=0.0766233;DP=4369;DP4=2186,2101,27,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.34805e-24;MQSB=0.832109;RPB=0.999963;SGB=-119.851;VDB=0.0694693;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.3:1337746 chr03:001337746 0 W/1337746-1337746 FN3557-S SNP T -> C AC=2;AN=188;BQB=0.990299;DP=3052;DP4=1385,1553,18,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.40716e-19;MQSB=0.899674;RPB=0.00569201;SGB=117.48;VDB=0.157872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.3:1342082 chr03:001342082 0 W/1342082-1342082 FN2461 SNP T -> A AC=1;AN=200;BQB=0.282807;DP=5223;DP4=2052,2799,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.12433e-12;MQSB=0.853574;RPB=0.614008;SGB=79.9264;VDB=0.72767;EFF=INTRON(MODIFIER||||312|LOC_Os03g03164|protein_coding|CODING|LOC_Os03g03164.1|2|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||314|LOC_Os03g03164|protein_coding|CODING|LOC_Os03g03164.2|2|1),INTRON(MODIFIER||||194|LOC_Os03g03164|protein_coding|CODING|LOC_Os03g03164.3|1|1|WARNING_TRANSCRIPT_INCOMPLETE) FN-350.SNP.3:1349274 chr03:001349274 0 W/1349274-1349274 FN-350 Single Base Substitution A-C INTRON HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2361.SNP.3:1350891 chr03:001350891 0 W/1350891-1350891 FN2361 SNP A -> T AC=2;AN=192;BQB=0.0813053;DP=5048;DP4=2109,2317,33,4;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.37618e-17;MQSB=0.652552;RPB=0.766683;SGB=38.6418;VDB=0.431317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E105V|139|LOC_Os03g03190|protein_coding|CODING|LOC_Os03g03190.1|1|1) FN-401.SNP.3:1356231 chr03:001356231 0 W/1356231-1356231 FN-401 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g03200 hydrolase, alpha/beta fold family protein, putative, expressed SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN622-S.SNP.3:1360899 chr03:001360899 0 W/1360899-1360899 FN622-S Single Base Substitution C-T INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN489-S.SNP.3:1363390 chr03:001363390 0 W/1363390-1363390 FN489-S Single Base Substitution C-T INTERGENIC HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN3312-S.SNP.3:1368068 chr03:001368068 0 W/1368068-1368068 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.999965;DP=3316;DP4=1634,1590,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0102533;MQB=1.32751e-09;MQSB=0.787089;RPB=0.680499;SGB=46.3132;VDB=0.919204;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F886|1053|LOC_Os03g03210|protein_coding|CODING|LOC_Os03g03210.1|6|1) FN2677-S.SNP.3:1370759 chr03:001370759 0 W/1370759-1370759 FN2677-S SNP A -> G AC=1;AN=200;BQB=0.999836;DP=4697;DP4=2266,2212,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212902;MQB=1.04391e-13;MQSB=0.84767;RPB=0.760569;SGB=65.5058;VDB=0.307551;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S327|727|LOC_Os03g03220|protein_coding|CODING|LOC_Os03g03220.1|2|1) FN3967-S.SNP.3:1373209 chr03:001373209 0 W/1373209-1373209 FN3967-S SNP A -> G AC=1;AN=182;BQB=0.9999;DP=3153;DP4=1538,1528,10,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.05351e-14;MQSB=0.99157;RPB=0.935249;SGB=102.753;VDB=0.89541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D344G|573|LOC_Os03g03230|protein_coding|CODING|LOC_Os03g03230.1|1|1) FN2436.SNP.3:1377438 chr03:001377438 0 W/1377438-1377438 FN2436 SNP C -> T AC=2;AN=200;BQB=0.434921;DP=4254;DP4=2024,1922,35,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.46904e-25;MQSB=0.796731;RPB=0.965444;SGB=195.292;VDB=0.989581;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.3:1381290 chr03:001381290 0 W/1381290-1381290 FN4135-S SNP C -> T AC=1;AN=182;BQB=0.806544;DP=3732;DP4=2073,1526,13,18;HOB=6.03792e-05;ICB=0.000121422;MQ=29;MQ0F=0.12567;MQB=0.486178;MQSB=7.14573e-31;RPB=0.522681;SGB=98.8232;VDB=0.327889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.3:1383785 chr03:001383785 0 W/1383785-1383785 FN2441 SNP A -> G AC=2;AN=200;BQB=0.825035;DP=4924;DP4=2160,2411,31,30;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.0296507;MQB=1.70871e-10;MQSB=1.08014e-06;RPB=0.997149;SGB=144.112;VDB=0.00506133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K377E|821|LOC_Os03g03240|protein_coding|CODING|LOC_Os03g03240.1|2|1) FN1554-S.SNP.3:1384813 chr03:001384813 0 W/1384813-1384813 FN1554-S Single Base Substitution C-T INTRON Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2692-S.SNP.3:1390732 chr03:001390732 0 W/1390732-1390732 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.178168;DP=4238;DP4=1774,2218,17,7;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.163992;MQB=0.10839;MQSB=0.872036;RPB=0.992743;SGB=104.921;VDB=0.742176;EFF=INTRON(MODIFIER||||1953|LOC_Os03g03250|protein_coding|CODING|LOC_Os03g03250.1|1|1) FN3455-S.SNP.3:1399631 chr03:001399631 0 W/1399631-1399631 FN3455-S SNP C -> A AC=1;AN=184;BQB=0.957821;DP=3755;DP4=1706,1961,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16579e-08;MQSB=0.996426;RPB=0.98528;SGB=71.3514;VDB=0.764012;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A568|591|LOC_Os03g03260|protein_coding|CODING|LOC_Os03g03260.1|5|1) FN347-S.SNP.3:1401394 chr03:001401394 0 W/1401394-1401394 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1565-S.SNP.3:1403813 chr03:001403813 0 W/1403813-1403813 FN1565-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1565-S.SNP.3:1403814 chr03:001403814 0 W/1403814-1403814 FN1565-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g03270 fringe-related protein, putative, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN3298-S.SNP.3:1407447 chr03:001407447 0 W/1407447-1407447 FN3298-S SNP C -> T AC=1;AN=184;BQB=0.890967;DP=4042;DP4=1816,2151,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70394e-07;MQSB=0.984751;RPB=0.999942;SGB=62.3078;VDB=0.0537192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L547F|955|LOC_Os03g03280|protein_coding|CODING|LOC_Os03g03280.1|1|1) FN4083-S.SNP.3:1419530 chr03:001419530 0 W/1419530-1419530 FN4083-S SNP C -> T AC=2;AN=182;BQB=0.878655;DP=2532;DP4=1229,1118,28,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.87278e-29;MQSB=0.989127;RPB=0.923952;SGB=223.562;VDB=0.974781;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.3:1427059 chr03:001427059 0 W/1427059-1427059 FN944-S Single Base Substitution T-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1755-S.SNP.3:1437907 chr03:001437907 0 W/1437907-1437907 FN1755-S SNP A -> G AC=1;AN=188;BQB=0.569651;DP=3316;DP4=1558,1722,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.000146787;MQSB=0.815071;RPB=0.9311;SGB=41.3359;VDB=0.396772;EFF=INTRON(MODIFIER||||285|LOC_Os03g03370|protein_coding|CODING|LOC_Os03g03370.1|3|1),INTRON(MODIFIER||||262|LOC_Os03g03370|protein_coding|CODING|LOC_Os03g03370.2|3|1) FN630-S.SNP.3:1442549 chr03:001442549 0 W/1442549-1442549 FN630-S Single Base Substitution A-G INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN892-S.SNP.3:1444216 chr03:001444216 0 W/1444216-1444216 FN892-S Single Base Substitution C-G INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN953-S.SNP.3:1444216 chr03:001444216 0 W/1444216-1444216 FN953-S Single Base Substitution C-G INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2102-S.SNP.3:1449810 chr03:001449810 0 W/1449810-1449810 FN2102-S SNP C -> G AC=1;AN=168;BQB=0.893403;DP=3385;DP4=1827,1536,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.000152114;MQSB=0.111582;RPB=0.915188;SGB=43.3113;VDB=0.960694;EFF=INTRON(MODIFIER||||356|LOC_Os03g03400|protein_coding|CODING|LOC_Os03g03400.1|4|1),INTRON(MODIFIER||||317|LOC_Os03g03400|protein_coding|CODING|LOC_Os03g03400.2|4|1) FN2124-S.SNP.3:1452384 chr03:001452384 0 W/1452384-1452384 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.956851;DP=4307;DP4=2271,1927,41,35;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.78935e-30;MQSB=0.127983;RPB=0.955616;SGB=-140.581;VDB=0.145421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.3:1452385 chr03:001452385 0 W/1452385-1452385 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.711484;DP=4314;DP4=2270,1946,35,34;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.43637e-32;MQSB=0.0679987;RPB=0.974289;SGB=6.59914;VDB=0.026379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.3:1456730 chr03:001456730 0 W/1456730-1456730 FN-184 Single Base Substitution G-A INTERGENIC HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN706-S.SNP.3:1475240 chr03:001475240 0 W/1475240-1475240 FN706-S Single Base Substitution C-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3759-S.SNP.3:1475489 chr03:001475489 0 W/1475489-1475489 FN3759-S SNP A -> C AC=2;AN=190;BQB=0.719701;DP=3016;DP4=1643,1186,17,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.61284e-20;MQSB=0.999878;RPB=0.933553;SGB=74.7373;VDB=0.914382;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.3:1477096 chr03:001477096 0 W/1477096-1477096 FN4147-S SNP G -> T AC=1;AN=170;BQB=0.972054;DP=2746;DP4=1429,1212,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.65738e-10;MQSB=0.978018;RPB=0.777667;SGB=83.4133;VDB=0.941205;EFF=SPLICE_SITE_REGION(LOW||||518|LOC_Os03g03430|protein_coding|CODING|LOC_Os03g03430.1|3|1),INTRON(MODIFIER||||518|LOC_Os03g03430|protein_coding|CODING|LOC_Os03g03430.1|3|1) FN-50.SNP.3:1479076 chr03:001479076 0 W/1479076-1479076 FN-50 Single Base Substitution T-C INTRON Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN2408.SNP.3:1492009 chr03:001492009 0 W/1492009-1492009 FN2408 SNP G -> A AC=1;AN=200;BQB=0.467848;DP=4739;DP4=2239,2261,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.79556e-06;MQSB=0.665896;RPB=0.649641;SGB=29.4541;VDB=0.241135;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.3:1493516 chr03:001493516 0 W/1493516-1493516 FN1029-S Single Base Substitution C-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2395.SNP.3:1500273 chr03:001500273 0 W/1500273-1500273 FN2395 SNP C -> G AC=1;AN=200;BQB=0.396196;DP=4998;DP4=2370,2409,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84791e-10;MQSB=0.899605;RPB=0.951156;SGB=47.4799;VDB=0.887196;EFF=SPLICE_SITE_REGION(LOW||||335|LOC_Os03g03470|protein_coding|CODING|LOC_Os03g03470.3|8|1),INTRON(MODIFIER||||335|LOC_Os03g03470|protein_coding|CODING|LOC_Os03g03470.4|8|1),INTRON(MODIFIER||||346|LOC_Os03g03470|protein_coding|CODING|LOC_Os03g03470.1|7|1),INTRON(MODIFIER||||335|LOC_Os03g03470|protein_coding|CODING|LOC_Os03g03470.2|8|1),INTRON(MODIFIER||||335|LOC_Os03g03470|protein_coding|CODING|LOC_Os03g03470.3|8|1) FN571-S.SNP.3:1500964 chr03:001500964 0 W/1500964-1500964 FN571-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g03470 expressed protein SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN691-S.SNP.3:1502860 chr03:001502860 0 W/1502860-1502860 FN691-S Single Base Substitution T-C INTRON HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2275-S.SNP.3:1508600 chr03:001508600 0 W/1508600-1508600 FN2275-S SNP G -> A AC=2;AN=190;BQB=0.714493;DP=3780;DP4=2014,1326,47,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00026455;MQB=2.39353e-31;MQSB=0.757501;RPB=0.261977;SGB=344.105;VDB=0.644601;EFF=UTR_5_PRIME(MODIFIER||45||197|LOC_Os03g03490|protein_coding|CODING|LOC_Os03g03490.1|1|1) FN1279-S.SNP.3:1508732 chr03:001508732 0 W/1508732-1508732 FN1279-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g03490 expressed protein SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-394.SNP.3:1509931 chr03:001509931 0 W/1509931-1509931 FN-394 Single Base Substitution C-T INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-176.SNP.3:1511233 chr03:001511233 0 W/1511233-1511233 FN-176 Single Base Substitution C-A INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN544-S.SNP.3:1517492 chr03:001517492 0 W/1517492-1517492 FN544-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g03510 CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2723-S.SNP.3:1519129 chr03:001519129 0 W/1519129-1519129 FN2723-S SNP G -> A AC=2;AN=200;BQB=0.773243;DP=5172;DP4=2425,2462,16,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000193349;MQB=5.47352e-18;MQSB=0.94492;RPB=0.86477;SGB=123.342;VDB=0.876741;EFF=UTR_5_PRIME(MODIFIER||1300||363|LOC_Os03g03510|protein_coding|CODING|LOC_Os03g03510.2|1|1),UTR_5_PRIME(MODIFIER||182||456|LOC_Os03g03510|protein_coding|CODING|LOC_Os03g03510.1|1|1) FN2207-S.SNP.3:1523512 chr03:001523512 0 W/1523512-1523512 FN2207-S SNP T -> C AC=1;AN=190;BQB=0.944953;DP=4954;DP4=2519,2143,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201857;MQB=7.96706e-08;MQSB=0.252169;RPB=0.432857;SGB=32.5467;VDB=0.348487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.3:1523513 chr03:001523513 0 W/1523513-1523513 FN2207-S SNP T -> A AC=1;AN=190;BQB=0.629056;DP=4940;DP4=2500,2136,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19882e-05;MQSB=0.340754;RPB=0.381789;SGB=15.9981;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.3:1530789 chr03:001530789 0 W/1530789-1530789 FN2184-S SNP C -> T AC=1;AN=190;BQB=0.910208;DP=5064;DP4=2072,2598,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00051582;MQSB=0.996974;RPB=0.981592;SGB=13.4442;VDB=0.983481;EFF=INTRON(MODIFIER||||366|LOC_Os03g03540|protein_coding|CODING|LOC_Os03g03540.1|2|1) FN2575-S.SNP.3:1532732 chr03:001532732 0 W/1532732-1532732 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.538056;DP=4418;DP4=2017,2225,22,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.43401e-28;MQSB=0.993807;RPB=0.953787;SGB=205.783;VDB=0.137285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.3:1546231 chr03:001546231 0 W/1546231-1546231 FN3425-S SNP G -> T AC=1;AN=184;BQB=0.996218;DP=2905;DP4=1352,1415,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.14825e-09;MQSB=0.880228;RPB=0.922243;SGB=46.3132;VDB=0.202281;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.3:1548138 chr03:001548138 0 W/1548138-1548138 FN-390 Single Base Substitution C-T INTERGENIC HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN2166-S.SNP.3:1556797 chr03:001556797 0 W/1556797-1556797 FN2166-S SNP A -> T AC=1;AN=168;BQB=0.132701;DP=4137;DP4=2101,1991,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.08805e-12;MQSB=0.999999;RPB=0.772291;SGB=-80.6216;VDB=0.624568;EFF=INTRON(MODIFIER||||884|LOC_Os03g03560|protein_coding|CODING|LOC_Os03g03560.1|7|1) FN1755-S.SNP.3:1557314 chr03:001557314 0 W/1557314-1557314 FN1755-S SNP C -> A AC=1;AN=188;BQB=0.220884;DP=4089;DP4=1918,2129,11,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.81349e-10;MQSB=0.984693;RPB=0.877765;SGB=-111.008;VDB=0.322455;EFF=INTRON(MODIFIER||||884|LOC_Os03g03560|protein_coding|CODING|LOC_Os03g03560.1|6|1) FN1399-S.SNP.3:1565220 chr03:001565220 0 W/1565220-1565220 FN1399-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1399-S.SNP.3:1565221 chr03:001565221 0 W/1565221-1565221 FN1399-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN896-S.SNP.3:1567623 chr03:001567623 0 W/1567623-1567623 FN896-S Single Base Substitution G-A INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN3508-S.SNP.3:1572109 chr03:001572109 0 W/1572109-1572109 FN3508-S SNP C -> T AC=1;AN=188;BQB=0.89972;DP=2610;DP4=1323,1239,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.20235e-05;MQSB=0.883388;RPB=0.992516;SGB=35.3493;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.3:1572109 chr03:001572109 0 W/1572109-1572109 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3909-S.SNP.3:1572298 chr03:001572298 0 W/1572298-1572298 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.995852;DP=2541;DP4=1193,1185,10,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.10925e-12;MQSB=0.937337;RPB=0.75239;SGB=11.6723;VDB=0.484002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.3:1576442 chr03:001576442 0 W/1576442-1576442 FN3376-S SNP T -> A AC=1;AN=184;BQB=0.833186;DP=2867;DP4=1172,1588,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.66608e-11;MQSB=0.997335;RPB=0.405109;SGB=70.9657;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.3:1586353 chr03:001586353 0 W/1586353-1586353 FN2611-S SNP T -> A AC=1;AN=200;BQB=0.794942;DP=4895;DP4=2193,2466,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.82748e-16;MQSB=0.999396;RPB=0.887538;SGB=79.9264;VDB=0.253381;EFF=INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.1|35|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.2|35|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.3|34|1) W427-1-1.SNP.3:1587942 chr03:001587942 0 W/1587942-1587942 W427-1-1 Single Base Substitution A-C INTRON HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1721-S.SNP.3:1596307 chr03:001596307 0 W/1596307-1596307 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.268392;DP=3912;DP4=2143,1704,31,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.41504e-26;MQSB=0.896786;RPB=0.760367;SGB=-160.142;VDB=0.345111;EFF=INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.1|11|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.2|11|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.3|10|1) FN1721-S.SNP.3:1596309 chr03:001596309 0 W/1596309-1596309 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.397973;DP=3888;DP4=2147,1678,30,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.71497e-26;MQSB=0.897497;RPB=0.185896;SGB=-50.1523;VDB=0.441535;EFF=INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.1|11|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.2|11|1),INTRON(MODIFIER||||1907|LOC_Os03g03610|protein_coding|CODING|LOC_Os03g03610.3|10|1) FN323-S.SNP.3:1597127 chr03:001597127 0 W/1597127-1597127 FN323-S Single Base Substitution C-A INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN229-S.SNP.3:1617800 chr03:001617800 0 W/1617800-1617800 FN229-S Single Base Substitution C-T INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2308.SNP.3:1623245 chr03:001623245 0 W/1623245-1623245 FN2308 SNP A -> T AC=1;AN=192;BQB=0.556471;DP=4986;DP4=2325,2358,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.742e-11;MQSB=0.823814;RPB=0.587235;SGB=8.91915;VDB=0.746062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.3:1624622 chr03:001624622 0 W/1624622-1624622 FN2293 SNP C -> T AC=1;AN=192;BQB=0.967542;DP=5300;DP4=2130,2833,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.93289e-11;MQSB=0.913303;RPB=0.24616;SGB=81.1609;VDB=0.364019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-314.SNP.3:1624679 chr03:001624679 0 W/1624679-1624679 FN-314 Single Base Substitution G-T INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2161-S.SNP.3:1625011 chr03:001625011 0 W/1625011-1625011 FN2161-S SNP G -> T AC=2;AN=168;BQB=0.100752;DP=2910;DP4=1238,1573,12,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.74728e-12;MQSB=0.987609;RPB=0.766254;SGB=-126.323;VDB=0.886887;EFF=UTR_5_PRIME(MODIFIER||1011||542|LOC_Os03g03660|protein_coding|CODING|LOC_Os03g03660.2|1|1),UTR_5_PRIME(MODIFIER||1011||542|LOC_Os03g03660|protein_coding|CODING|LOC_Os03g03660.4|1|1) FN1416-S.SNP.3:1628850 chr03:001628850 0 W/1628850-1628850 FN1416-S Single Base Substitution C-T INTRON HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN416-S.SNP.3:1629933 chr03:001629933 0 W/1629933-1629933 FN416-S Single Base Substitution G-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN-306.SNP.3:1645870 chr03:001645870 0 W/1645870-1645870 FN-306 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1496-S.SNP.3:1653461 chr03:001653461 0 W/1653461-1653461 FN1496-S Single Base Substitution T-A UTR_3_PRIME Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2431.SNP.3:1663844 chr03:001663844 0 W/1663844-1663844 FN2431 SNP G -> C AC=1;AN=200;BQB=0.907283;DP=4564;DP4=2241,2026,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.22061e-12;MQSB=0.950083;RPB=0.908763;SGB=39.9056;VDB=0.532113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K148N|444|LOC_Os03g03720|protein_coding|CODING|LOC_Os03g03720.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K22N|318|LOC_Os03g03720|protein_coding|CODING|LOC_Os03g03720.2|3|1) FN2458.SNP.3:1675907 chr03:001675907 0 W/1675907-1675907 FN2458 SNP T -> C AC=1;AN=200;BQB=0.720287;DP=5201;DP4=2583,2363,8,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.17718e-17;MQSB=0.70754;RPB=0.981577;SGB=101.557;VDB=0.874835;EFF=INTRON(MODIFIER||||396|LOC_Os03g03760|protein_coding|CODING|LOC_Os03g03760.1|4|1) FN2692-S.SNP.3:1685125 chr03:001685125 0 W/1685125-1685125 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.918129;DP=5118;DP4=2684,2057,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80924e-11;MQSB=0.788011;RPB=0.899282;SGB=55.5366;VDB=0.224555;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.3:1689099 chr03:001689099 0 W/1689099-1689099 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.976967;DP=4134;DP4=1814,2082,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53514e-11;MQSB=0.30597;RPB=0.94974;SGB=44.0907;VDB=0.912539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S109F|109|LOC_Os03g03770|protein_coding|CODING|LOC_Os03g03770.1|1|1) FN-198.SNP.3:1692805 chr03:001692805 0 W/1692805-1692805 FN-198 Single Base Substitution G-T INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2331.SNP.3:1695137 chr03:001695137 0 W/1695137-1695137 FN2331 SNP C -> G AC=1;AN=192;BQB=0.938686;DP=5189;DP4=2361,2416,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.98217e-11;MQSB=0.575626;RPB=0.746601;SGB=22.9983;VDB=0.0925999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.3:1699260 chr03:001699260 0 W/1699260-1699260 FN2421 SNP T -> A AC=2;AN=200;BQB=0.922291;DP=5045;DP4=2287,2422,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.87542e-21;MQSB=0.990175;RPB=0.996421;SGB=84.1935;VDB=0.572678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.3:1702122 chr03:001702122 0 W/1702122-1702122 FN2219-S SNP T -> G AC=1;AN=190;BQB=0.925134;DP=4992;DP4=2436,2200,17,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200321;MQB=8.3953e-12;MQSB=0.604058;RPB=0.478169;SGB=14.9883;VDB=0.569805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.3:1703159 chr03:001703159 0 W/1703159-1703159 FN1481-S Single Base Substitution T-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2684-S.SNP.3:1705347 chr03:001705347 0 W/1705347-1705347 FN2684-S SNP C -> T AC=2;AN=200;BQB=0.312875;DP=5326;DP4=2287,2631,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.26369e-23;MQSB=0.932615;RPB=0.624847;SGB=46.4088;VDB=0.140799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.3:1707620 chr03:001707620 0 W/1707620-1707620 FN2480 SNP A -> G AC=1;AN=200;BQB=0.361869;DP=3756;DP4=1734,1484,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000266241;MQB=1.47955e-06;MQSB=0.999912;RPB=0.27846;SGB=54.2646;VDB=0.514339;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R436G|578|LOC_Os03g03790|protein_coding|CODING|LOC_Os03g03790.1|2|1) FN3699-S.SNP.3:1708484 chr03:001708484 0 W/1708484-1708484 FN3699-S SNP G -> T AC=2;AN=190;BQB=0.994179;DP=2731;DP4=1376,1197,21,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.86618e-20;MQSB=0.959048;RPB=0.806106;SGB=77.2911;VDB=0.841664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.3:1724456 chr03:001724456 0 W/1724456-1724456 FN2690-S SNP C -> T AC=1;AN=200;BQB=0.246715;DP=5045;DP4=2853,1911,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.29033e-10;MQSB=0.997482;RPB=0.644169;SGB=72.6852;VDB=0.538758;EFF=INTRON(MODIFIER||||1068|LOC_Os03g03830|protein_coding|CODING|LOC_Os03g03830.1|4|1) FN472-S.SNP.3:1725235 chr03:001725235 0 W/1725235-1725235 FN472-S Single Base Substitution G-C INTRON HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2423.SNP.3:1727911 chr03:001727911 0 W/1727911-1727911 FN2423 SNP T -> C AC=1;AN=200;BQB=0.82183;DP=4758;DP4=1901,2392,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4871e-13;MQSB=0.811006;RPB=0.80833;SGB=20.7261;VDB=0.153832;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.3:1729168 chr03:001729168 0 W/1729168-1729168 FN4164-S SNP C -> G AC=2;AN=170;BQB=0.968098;DP=2366;DP4=1127,1133,19,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.09407e-16;MQSB=0.723434;RPB=0.346891;SGB=141.168;VDB=0.578549;EFF=INTERGENIC(MODIFIER||||||||||1) W481-5-1.SNP.3:1737551 chr03:001737551 0 W/1737551-1737551 W481-5-1 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3762-S.SNP.3:1738914 chr03:001738914 0 W/1738914-1738914 FN3762-S SNP G -> C AC=1;AN=190;BQB=0.957758;DP=3176;DP4=1565,1523,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.57371e-10;MQSB=0.849456;RPB=0.996156;SGB=71.8647;VDB=0.912972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I531M|913|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I526M|908|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I526M|908|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.3|4|1) FN3663-S.SNP.3:1739794 chr03:001739794 0 W/1739794-1739794 FN3663-S SNP C -> A AC=1;AN=190;BQB=0.994103;DP=2932;DP4=1518,1307,13,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000341064;MQB=1.08799e-08;MQSB=0.91511;RPB=0.56845;SGB=23.6597;VDB=0.00962432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C238F|913|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C233F|908|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C233F|908|LOC_Os03g03860|protein_coding|CODING|LOC_Os03g03860.3|4|1) FN-407.SNP.3:1744911 chr03:001744911 0 W/1744911-1744911 FN-407 Single Base Substitution A-T INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.3:1744911 chr03:001744911 0 W/1744911-1744911 FN407-S Single Base Substitution A-T INTERGENIC HOMO SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1576-S.SNP.3:1749597 chr03:001749597 0 W/1749597-1749597 FN1576-S Single Base Substitution A-C INTERGENIC Homo SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2564-S.SNP.3:1749979 chr03:001749979 0 W/1749979-1749979 FN2564-S SNP T -> C AC=1;AN=198;BQB=0.596419;DP=4411;DP4=2290,1970,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000226706;MQB=0.00953244;MQSB=0.673503;RPB=0.827386;SGB=31.1689;VDB=0.630851;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.3:1750144 chr03:001750144 0 W/1750144-1750144 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.746904;DP=2587;DP4=1136,1213,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.04869e-12;MQSB=0.912136;RPB=0.180152;SGB=19.6499;VDB=0.420694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.3:1754340 chr03:001754340 0 W/1754340-1754340 FN1423-S Single Base Substitution C-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2462.SNP.3:1757169 chr03:001757169 0 W/1757169-1757169 FN2462 SNP C -> T AC=1;AN=200;BQB=0.962758;DP=4721;DP4=2271,2191,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13237e-14;MQSB=0.984409;RPB=0.550226;SGB=83.5316;VDB=0.52706;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q351*|483|LOC_Os03g03870|protein_coding|CODING|LOC_Os03g03870.1|9|1) FN2462.SNP.3:1757170 chr03:001757170 0 W/1757170-1757170 FN2462 SNP A -> T AC=1;AN=200;BQB=0.747269;DP=4737;DP4=2247,2137,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26384e-14;MQSB=0.999966;RPB=0.586351;SGB=76.3213;VDB=0.387565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q351L|483|LOC_Os03g03870|protein_coding|CODING|LOC_Os03g03870.1|9|1) FN3472-S.SNP.3:1759358 chr03:001759358 0 W/1759358-1759358 FN3472-S SNP T -> C AC=1;AN=184;BQB=0.850158;DP=2945;DP4=1379,1467,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40157e-08;MQSB=0.921638;RPB=0.146799;SGB=35.7479;VDB=0.152434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.3:1765746 chr03:001765746 0 W/1765746-1765746 FN3799-S SNP C -> G AC=1;AN=190;BQB=0.878656;DP=1553;DP4=995,421,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000643915;MQB=0.0002962;MQSB=9.33305e-13;RPB=0.148171;SGB=44.5415;VDB=0.976996;EFF=UTR_5_PRIME(MODIFIER||292||381|LOC_Os03g03880|protein_coding|CODING|LOC_Os03g03880.1|1|1) FN_552-1-1.SNP.3:1775020 chr03:001775020 0 W/1775020-1775020 FN_552-1-1 Single Base Substitution G-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN661-S.SNP.3:1782730 chr03:001782730 0 W/1782730-1782730 FN661-S Single Base Substitution A-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN1438-S.SNP.3:1798736 chr03:001798736 0 W/1798736-1798736 FN1438-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3478-S.SNP.3:1808636 chr03:001808636 0 W/1808636-1808636 FN3478-S SNP G -> A AC=2;AN=184;BQB=0.996828;DP=3591;DP4=1700,1752,26,25;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0064049;MQB=2.38065e-13;MQSB=0.729642;RPB=0.644327;SGB=225.092;VDB=0.827425;EFF=INTRON(MODIFIER||||372|LOC_Os03g03949|protein_coding|CODING|LOC_Os03g03949.2|4|1) FN2399.SNP.3:1810594 chr03:001810594 0 W/1810594-1810594 FN2399 SNP A -> T AC=1;AN=200;BQB=0.788612;DP=4167;DP4=2061,1727,7,14;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0842333;MQB=0.576092;MQSB=0.107123;RPB=0.723658;SGB=65.5058;VDB=0.996975;EFF=INTRON(MODIFIER||||372|LOC_Os03g03949|protein_coding|CODING|LOC_Os03g03949.2|4|1) FN1382-S.SNP.3:1812947 chr03:001812947 0 W/1812947-1812947 FN1382-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3508-S.SNP.3:1812947 chr03:001812947 0 W/1812947-1812947 FN3508-S SNP A -> G AC=1;AN=188;BQB=0.948963;DP=2782;DP4=1356,1352,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.033e-06;MQSB=0.865264;RPB=0.979771;SGB=35.3493;VDB=0.137712;EFF=UTR_3_PRIME(MODIFIER||103||372|LOC_Os03g03949|protein_coding|CODING|LOC_Os03g03949.2|7|1) W607-2-1.SNP.3:1812947 chr03:001812947 0 W/1812947-1812947 W607-2-1 Single Base Substitution A-G UTR_3_PRIME HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1577-S.SNP.3:1829114 chr03:001829114 0 W/1829114-1829114 FN1577-S Single Base Substitution C-T INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-299.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN-299 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-315.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN-315 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN-387 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1024-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN1024-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1339-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN1339-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g04030 HVA22, putative, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN1728-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN1728-S SNP C -> A AC=1;AN=188;BQB=0.621059;DP=4074;DP4=2048,1991,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.52531e-07;MQSB=0.999687;RPB=0.538153;SGB=2.45162;VDB=0.603565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN2120-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN2120-S SNP C -> A AC=2;AN=168;BQB=0.259264;DP=4238;DP4=2086,2055,33,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.45008e-29;MQSB=0.998608;RPB=0.892922;SGB=291.437;VDB=0.897616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN2456.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN2456 SNP C -> A AC=2;AN=200;BQB=0.873329;DP=5004;DP4=2510,2205,18,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.72015e-21;MQSB=0.6091;RPB=0.251185;SGB=112.373;VDB=0.311624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN2658-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN2658-S SNP C -> A AC=2;AN=200;BQB=0.995688;DP=5043;DP4=2486,2273,18,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25541e-20;MQSB=0.859692;RPB=0.329709;SGB=164.789;VDB=0.458928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN3376-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN3376-S SNP C -> A AC=1;AN=184;BQB=0.924098;DP=2776;DP4=1350,1317,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13267e-11;MQSB=0.891083;RPB=0.314538;SGB=93.9603;VDB=0.84012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN347-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN347-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3482-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN3482-S SNP C -> A AC=1;AN=184;BQB=0.952334;DP=2528;DP4=1269,1188,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.15696e-05;MQSB=0.989833;RPB=0.965432;SGB=44.2207;VDB=0.614683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN3599-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN3599-S SNP C -> A AC=2;AN=188;BQB=0.747641;DP=2661;DP4=1273,1307,19,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.03331e-20;MQSB=0.995387;RPB=0.155863;SGB=121.023;VDB=0.0675876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN3766-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN3766-S SNP C -> A AC=2;AN=190;BQB=0.545971;DP=2658;DP4=1312,1243,14,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27639e-08;MQSB=0.977935;RPB=0.999637;SGB=64.5316;VDB=0.502671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN3897-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN3897-S SNP C -> A AC=1;AN=158;BQB=0.831684;DP=2402;DP4=1186,1130,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.12714e-07;MQSB=0.980121;RPB=0.0398473;SGB=60.1755;VDB=0.279217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN4024-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN4024-S SNP C -> A AC=2;AN=168;BQB=0.6688;DP=2481;DP4=1167,1225,10,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.28813e-09;MQSB=0.998079;RPB=0.896687;SGB=55.3328;VDB=0.248693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN4176-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN4176-S SNP C -> A AC=1;AN=170;BQB=0.978139;DP=2590;DP4=1287,1233,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.89589e-09;MQSB=0.995963;RPB=0.856764;SGB=38.3207;VDB=0.15051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V56F|288|LOC_Os03g04030|protein_coding|CODING|LOC_Os03g04030.1|4|1) FN696-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN696-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN874-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN874-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN949-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.3:1838424 chr03:001838424 0 W/1838424-1838424 FN975-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g04030 HVA22, putative, expressed SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_846-8-1.SNP.3:1840546 chr03:001840546 0 W/1840546-1840546 FN_846-8-1 Single Base Substitution C-T HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2611-S.SNP.3:1843069 chr03:001843069 0 W/1843069-1843069 FN2611-S SNP T -> A AC=1;AN=200;BQB=0.279113;DP=4892;DP4=2355,2218,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11428e-16;MQSB=0.999445;RPB=0.543634;SGB=-40.4483;VDB=0.539055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.3:1843140 chr03:001843140 0 W/1843140-1843140 FN3905-S SNP A -> T AC=1;AN=158;BQB=0.810666;DP=2539;DP4=1294,1110,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.3657e-06;MQSB=0.93134;RPB=0.447642;SGB=42.6978;VDB=0.232475;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.3:1843288 chr03:001843288 0 W/1843288-1843288 FN576-S Single Base Substitution G-T INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN576-S.SNP.3:1843289 chr03:001843289 0 W/1843289-1843289 FN576-S Single Base Substitution A-T INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN_770-6-1.SNP.3:1843474 chr03:001843474 0 W/1843474-1843474 FN_770-6-1 Single Base Substitution T-C HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1634-S.SNP.3:1844126 chr03:001844126 0 W/1844126-1844126 FN1634-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g04040 expressed protein SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1131-S.SNP.3:1850153 chr03:001850153 0 W/1850153-1850153 FN1131-S Single Base Substitution A-C INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN2532-S.SNP.3:1850871 chr03:001850871 0 W/1850871-1850871 FN2532-S SNP G -> A AC=1;AN=198;BQB=1.83141e-06;DP=3576;DP4=1397,1483,11,39;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.06616e-14;MQSB=0.108717;RPB=0.00142025;SGB=-363.64;VDB=0.951954;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.3:1851946 chr03:001851946 0 W/1851946-1851946 FN1239-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN_1017-1.SNP.3:1856463 chr03:001856463 0 W/1856463-1856463 FN_1017-1 Single Base Substitution C-T Homo LOC_Os03g04050 protein kinase family protein, putative, expressed SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN1568-S.SNP.3:1858419 chr03:001858419 0 W/1858419-1858419 FN1568-S Single Base Substitution A-T INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2203-S.SNP.3:1862659 chr03:001862659 0 W/1862659-1862659 FN2203-S SNP G -> T AC=1;AN=190;BQB=0.864221;DP=4312;DP4=2138,1811,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.35682e-12;MQSB=0.68544;RPB=0.229361;SGB=99.1879;VDB=0.469391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q290K|316|LOC_Os03g04070|protein_coding|CODING|LOC_Os03g04070.1|3|1) FN2681-S.SNP.3:1871787 chr03:001871787 0 W/1871787-1871787 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.910913;DP=5064;DP4=2345,2422,21,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29235e-22;MQSB=0.947606;RPB=0.68917;SGB=84.1935;VDB=0.33701;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.3:1873002 chr03:001873002 0 W/1873002-1873002 FN933-S Single Base Substitution C-A INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-173.SNP.3:1881063 chr03:001881063 0 W/1881063-1881063 FN-173 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g04110 lysM domain-containing GPI-anchored protein precursor, putative, expressed SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2109-S.SNP.3:1888895 chr03:001888895 0 W/1888895-1888895 FN2109-S SNP A -> G AC=1;AN=168;BQB=0.39461;DP=3489;DP4=2101,1331,11,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39802e-11;MQSB=0.86387;RPB=0.328189;SGB=-144.333;VDB=0.280119;EFF=INTRON(MODIFIER||||649|LOC_Os03g04130|protein_coding|CODING|LOC_Os03g04130.1|1|1) FN-370.SNP.3:1894873 chr03:001894873 0 W/1894873-1894873 FN-370 Single Base Substitution G-A INTRON HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1571-S.SNP.3:1906691 chr03:001906691 0 W/1906691-1906691 FN1571-S Single Base Substitution C-T INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-363.SNP.3:1924869 chr03:001924869 0 W/1924869-1924869 FN-363 Single Base Substitution A-G INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN4096-S.SNP.3:1925162 chr03:001925162 0 W/1925162-1925162 FN4096-S SNP T -> A AC=2;AN=182;BQB=0.639486;DP=2741;DP4=1235,1398,13,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.27782e-13;MQSB=0.739322;RPB=0.993711;SGB=84.7797;VDB=0.9964;EFF=INTERGENIC(MODIFIER||||||||||1) FN693-S.SNP.3:1931453 chr03:001931453 0 W/1931453-1931453 FN693-S Single Base Substitution G-T INTERGENIC HOMO SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN3639-S.SNP.3:1939150 chr03:001939150 0 W/1939150-1939150 FN3639-S SNP G -> A AC=1;AN=190;BQB=0.918978;DP=2813;DP4=1454,1265,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6432e-07;MQSB=0.92599;RPB=0.6092;SGB=44.5415;VDB=0.145612;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S99F|319|LOC_Os03g04220|protein_coding|CODING|LOC_Os03g04220.1|3|1) FN3425-S.SNP.3:1940426 chr03:001940426 0 W/1940426-1940426 FN3425-S SNP A -> T AC=1;AN=184;BQB=0.846744;DP=2374;DP4=1084,1158,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.061e-06;MQSB=0.964767;RPB=0.941587;SGB=20.7533;VDB=0.939074;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.3:1941734 chr03:001941734 0 W/1941734-1941734 FN-183 Single Base Substitution G-A INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3712-S.SNP.3:1946196 chr03:001946196 0 W/1946196-1946196 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.886495;DP=2160;DP4=1226,828,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000462963;MQB=6.89868e-07;MQSB=0.250029;RPB=0.983651;SGB=53.6492;VDB=0.416486;EFF=INTRON(MODIFIER||||238|LOC_Os03g04230|protein_coding|CODING|LOC_Os03g04230.1|1|1) FN3371-S.SNP.3:1951123 chr03:001951123 0 W/1951123-1951123 FN3371-S SNP C -> T AC=2;AN=184;BQB=0.641732;DP=3168;DP4=1353,1673,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.34766e-13;MQSB=0.607437;RPB=0.230851;SGB=53.5365;VDB=0.314169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.3:1951916 chr03:001951916 0 W/1951916-1951916 FN1212-S Single Base Substitution T-G INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2085-S.SNP.3:1965196 chr03:001965196 0 W/1965196-1965196 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.407437;DP=2644;DP4=1374,1235,16,8;HOB=7.08617e-05;ICB=0.000142567;MQ=20;MQ0F=0.343419;MQB=0.049248;MQSB=0;RPB=0.997881;SGB=15.6372;VDB=0.646346;EFF=SPLICE_SITE_REGION(LOW||||779|LOC_Os03g04290|protein_coding|CODING|LOC_Os03g04290.1|3|1),INTRON(MODIFIER||||779|LOC_Os03g04290|protein_coding|CODING|LOC_Os03g04290.1|3|1) FN1263-S.SNP.3:1979970 chr03:001979970 0 W/1979970-1979970 FN1263-S Single Base Substitution T-A INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1263-S.SNP.3:1979972 chr03:001979972 0 W/1979972-1979972 FN1263-S Single Base Substitution G-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN-387.SNP.3:1982034 chr03:001982034 0 W/1982034-1982034 FN-387 Single Base Substitution G-T INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN860-S.SNP.3:1982174 chr03:001982174 0 W/1982174-1982174 FN860-S Single Base Substitution C-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN621-S.SNP.3:1982270 chr03:001982270 0 W/1982270-1982270 FN621-S Single Base Substitution T-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2573-S.SNP.3:1983397 chr03:001983397 0 W/1983397-1983397 FN2573-S SNP A -> G AC=1;AN=198;BQB=0.494601;DP=4068;DP4=2064,1805,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.00258705;MQSB=0.0563642;RPB=0.99369;SGB=8.58354;VDB=0.130321;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.3:1987874 chr03:001987874 0 W/1987874-1987874 FN2267-S SNP T -> C AC=2;AN=190;BQB=0.971332;DP=1712;DP4=1620,5,10,0;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68376e-06;MQSB=0.84092;RPB=0.827653;SGB=39.9877;VDB=0.165106;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.3:2011575 chr03:002011575 0 W/2011575-2011575 FN395-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4052-S.SNP.3:2021553 chr03:002021553 0 W/2021553-2021553 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.999994;DP=2443;DP4=1027,1323,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.58825e-10;MQSB=0.994125;RPB=0.81921;SGB=83.1885;VDB=0.100496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E123K|296|LOC_Os03g04400|protein_coding|CODING|LOC_Os03g04400.1|1|1) FN981-S.SNP.3:2023296 chr03:002023296 0 W/2023296-2023296 FN981-S Single Base Substitution A-G INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1485-S.SNP.3:2025714 chr03:002025714 0 W/2025714-2025714 FN1485-S Single Base Substitution C-T INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2357.SNP.3:2029564 chr03:002029564 0 W/2029564-2029564 FN2357 SNP A -> T AC=1;AN=192;BQB=0.945469;DP=5126;DP4=2164,2754,14,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.96847e-21;MQSB=0.745738;RPB=0.211413;SGB=114.631;VDB=0.566781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F494Y|986|LOC_Os03g04410|protein_coding|CODING|LOC_Os03g04410.1|12|1) FN661-S.SNP.3:2032542 chr03:002032542 0 W/2032542-2032542 FN661-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g04410 aconitate hydratase protein, putative, expressed SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2313.SNP.3:2033361 chr03:002033361 0 W/2033361-2033361 FN2313 SNP G -> A AC=1;AN=192;BQB=0.964059;DP=3928;DP4=1890,1704,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.5878e-08;MQSB=0.999974;RPB=0.874533;SGB=5.79046;VDB=0.596623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P40L|986|LOC_Os03g04410|protein_coding|CODING|LOC_Os03g04410.1|1|1) FN2626-S.SNP.3:2039203 chr03:002039203 0 W/2039203-2039203 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.784804;DP=4759;DP4=2460,2097,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25227e-05;MQSB=0.959669;RPB=0.348067;SGB=11.2488;VDB=0.0591175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.3:2046197 chr03:002046197 0 W/2046197-2046197 FN3826-S SNP T -> A AC=2;AN=190;BQB=0.947501;DP=3740;DP4=2069,1477,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.76391e-16;MQSB=0.909072;RPB=0.999994;SGB=59.414;VDB=0.374118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.3:2050856 chr03:002050856 0 W/2050856-2050856 FN-160 Single Base Substitution G-C INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1097-S.SNP.3:2057058 chr03:002057058 0 W/2057058-2057058 FN1097-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g04430 protein phosphatase 2C, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1723-S.SNP.3:2058157 chr03:002058157 0 W/2058157-2058157 FN1723-S SNP A -> G AC=2;AN=188;BQB=0.0452466;DP=3581;DP4=1638,1881,26,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.58711e-20;MQSB=0.992238;RPB=0.510264;SGB=50.2938;VDB=0.251047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q304R|399|LOC_Os03g04430|protein_coding|CODING|LOC_Os03g04430.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q189R|284|LOC_Os03g04430|protein_coding|CODING|LOC_Os03g04430.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q304R|319|LOC_Os03g04430|protein_coding|CODING|LOC_Os03g04430.2|4|1) FN944-S.SNP.3:2061415 chr03:002061415 0 W/2061415-2061415 FN944-S Single Base Substitution G-A INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN713-S.SNP.3:2061986 chr03:002061986 0 W/2061986-2061986 FN713-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g04440 expressed protein SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2550-S.SNP.3:2068063 chr03:002068063 0 W/2068063-2068063 FN2550-S SNP T -> C AC=1;AN=198;BQB=0.717174;DP=3864;DP4=1832,1875,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000258799;MQB=1.44773e-05;MQSB=0.884334;RPB=0.959628;SGB=5.98864;VDB=0.440716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.3:2082047 chr03:002082047 0 W/2082047-2082047 FN2462 SNP T -> G AC=1;AN=200;BQB=0.879867;DP=4787;DP4=2051,2504,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20268e-08;MQSB=0.0155156;RPB=0.451046;SGB=68.0801;VDB=0.111509;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.3:2083930 chr03:002083930 0 W/2083930-2083930 FN242-S Single Base Substitution G-C INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2361.SNP.3:2084060 chr03:002084060 0 W/2084060-2084060 FN2361 SNP A -> T AC=1;AN=192;BQB=0.344748;DP=5318;DP4=2372,2494,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26873e-12;MQSB=0.345648;RPB=0.910491;SGB=89.6809;VDB=0.180817;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.3:2086736 chr03:002086736 0 W/2086736-2086736 FN1436-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2216-S.SNP.3:2086736 chr03:002086736 0 W/2086736-2086736 FN2216-S SNP C -> G AC=1;AN=190;BQB=0.528941;DP=5170;DP4=2898,1852,18,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193424;MQB=4.21549e-13;MQSB=0.828245;RPB=0.45136;SGB=-40.3396;VDB=0.611137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.3:2087012 chr03:002087012 0 W/2087012-2087012 FN2411 SNP T -> C AC=1;AN=200;BQB=0.436026;DP=5100;DP4=2605,2209,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.6065e-19;MQSB=0.977807;RPB=0.941532;SGB=36.7778;VDB=0.733921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.3:2087593 chr03:002087593 0 W/2087593-2087593 FN3283-S SNP T -> A AC=1;AN=184;BQB=0.909252;DP=3007;DP4=1448,1412,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.6105e-09;MQSB=0.91379;RPB=0.762292;SGB=57.786;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.3:2088018 chr03:002088018 0 W/2088018-2088018 FN3293-S SNP A -> G AC=1;AN=184;BQB=0.921803;DP=2782;DP4=1528,1128,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.78027e-07;MQSB=0.92575;RPB=0.442732;SGB=44.2207;VDB=0.0927458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.3:2092184 chr03:002092184 0 W/2092184-2092184 FN1446-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN4069-S.SNP.3:2100815 chr03:002100815 0 W/2100815-2100815 FN4069-S SNP T -> G AC=1;AN=182;BQB=0.98823;DP=2788;DP4=1382,1347,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.15885e-12;MQSB=0.989767;RPB=0.935868;SGB=67.2255;VDB=0.447223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I501S|671|LOC_Os03g04500|protein_coding|CODING|LOC_Os03g04500.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I501S|671|LOC_Os03g04500|protein_coding|CODING|LOC_Os03g04500.2|4|1) FN1488-S.SNP.3:2100867 chr03:002100867 0 W/2100867-2100867 FN1488-S Single Base Substitution T-A SPLICE_SITE_REGION Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN-154.SNP.3:2101818 chr03:002101818 0 W/2101818-2101818 FN-154 Single Base Substitution T-G UTR_3_PRIME HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN522-S.SNP.3:2120939 chr03:002120939 0 W/2120939-2120939 FN522-S Single Base Substitution T-C INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1120-S.SNP.3:2127207 chr03:002127207 0 W/2127207-2127207 FN1120-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g04560 expressed protein SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN981-S.SNP.3:2131463 chr03:002131463 0 W/2131463-2131463 FN981-S Single Base Substitution T-G INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-99.SNP.3:2133416 chr03:002133416 0 W/2133416-2133416 FN-99 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g04570 peptide transporter PTR3-A, putative, expressed SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN680-S.SNP.3:2137861 chr03:002137861 0 W/2137861-2137861 FN680-S Single Base Substitution C-A INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1656-S.SNP.3:2137997 chr03:002137997 0 W/2137997-2137997 FN1656-S Single Base Substitution C-G INTERGENIC Homo SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN367-S.SNP.3:2138366 chr03:002138366 0 W/2138366-2138366 FN367-S Single Base Substitution T-A INTERGENIC HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3769-S.SNP.3:2138745 chr03:002138745 0 W/2138745-2138745 FN3769-S SNP G -> A AC=2;AN=190;BQB=0.632305;DP=3169;DP4=2026,1024,17,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.92281e-09;MQSB=0.995114;RPB=0.504504;SGB=94.6341;VDB=0.362617;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.3:2139620 chr03:002139620 0 W/2139620-2139620 FN2218-S SNP A -> G AC=2;AN=190;BQB=0.919004;DP=4511;DP4=1656,2343,15,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.07888e-18;MQSB=0.140234;RPB=0.455126;SGB=77.2911;VDB=0.164921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.3:2163548 chr03:002163548 0 W/2163548-2163548 FN1384-S Single Base Substitution T-C INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-152.SNP.3:2170670 chr03:002170670 0 W/2170670-2170670 FN-152 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g04630 cytochrome P450 protein, putative, expressed SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1471-S.SNP.3:2171889 chr03:002171889 0 W/2171889-2171889 FN1471-S SNP T -> A AC=1;AN=188;BQB=0.491726;DP=3209;DP4=1794,1367,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.20632e-11;MQSB=0.997555;RPB=0.820054;SGB=-38.7347;VDB=0.844693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C519S|536|LOC_Os03g04630|protein_coding|CODING|LOC_Os03g04630.1|2|1) FN1156-XA21.SNP.3:2174826 chr03:002174826 0 W/2174826-2174826 FN1156-XA21 Single Base Substitution C-A INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2674-S.SNP.3:2177833 chr03:002177833 0 W/2177833-2177833 FN2674-S SNP G -> T AC=1;AN=200;BQB=0.985734;DP=4804;DP4=2257,2303,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06468e-11;MQSB=0.989052;RPB=0.631873;SGB=72.7161;VDB=0.725138;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:2178545 chr03:002178545 0 W/2178545-2178545 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN739-S.SNP.3:2187377 chr03:002187377 0 W/2187377-2187377 FN739-S Single Base Substitution G-T INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3848-S.SNP.3:2193882 chr03:002193882 0 W/2193882-2193882 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.990813;DP=2352;DP4=941,1295,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.96216e-06;MQSB=0.173125;RPB=0.295288;SGB=38.3284;VDB=0.359729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.3:2193883 chr03:002193883 0 W/2193883-2193883 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.993254;DP=2355;DP4=958,1282,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.03165e-06;MQSB=0.149618;RPB=0.675561;SGB=38.3284;VDB=0.465515;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-1.SNP.3:2196252 chr03:002196252 0 W/2196252-2196252 FN_N1-151-1 Single Base Substitution G-C INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN945-S.SNP.3:2201767 chr03:002201767 0 W/2201767-2201767 FN945-S Single Base Substitution G-A INTERGENIC HOMO SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN1258-S.SNP.3:2205421 chr03:002205421 0 W/2205421-2205421 FN1258-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2329.SNP.3:2205622 chr03:002205622 0 W/2205622-2205622 FN2329 SNP C -> A AC=1;AN=192;BQB=0.213851;DP=4628;DP4=2293,1968,15,25;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00302506;MQB=7.69906e-15;MQSB=0.0884315;RPB=0.377671;SGB=-714.17;VDB=1.54427e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.3:2206652 chr03:002206652 0 W/2206652-2206652 FN2492 SNP C -> T AC=1;AN=200;BQB=0.760421;DP=4016;DP4=2233,1504,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.12082e-06;MQSB=0.237362;RPB=0.808139;SGB=32.0901;VDB=0.143887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.3:2206718 chr03:002206718 0 W/2206718-2206718 FN2289 SNP T -> A AC=1;AN=192;BQB=0.144485;DP=3708;DP4=1840,1412,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.20792e-10;MQSB=0.0378206;RPB=0.993873;SGB=-38.3774;VDB=0.182871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.3:2206721 chr03:002206721 0 W/2206721-2206721 FN2289 SNP C -> A AC=1;AN=192;BQB=0.247115;DP=3734;DP4=1803,1469,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.08464e-07;MQSB=0.0877941;RPB=0.644058;SGB=8.91915;VDB=0.158996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.3:2214559 chr03:002214559 0 W/2214559-2214559 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2559-S.SNP.3:2217477 chr03:002217477 0 W/2217477-2217477 FN2559-S SNP G -> C AC=2;AN=198;BQB=0.999969;DP=4335;DP4=2117,1929,12,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.73154e-11;MQSB=0.999691;RPB=0.53738;SGB=50.9344;VDB=0.144039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.3:2231926 chr03:002231926 0 W/2231926-2231926 FN1134-S Single Base Substitution A-G INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2619-S.SNP.3:2237309 chr03:002237309 0 W/2237309-2237309 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.999531;DP=4500;DP4=1934,2293,13,29;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0255556;MQB=0.0521784;MQSB=1.93922e-08;RPB=0.805638;SGB=47.6323;VDB=0.0617333;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.3:2249430 chr03:002249430 0 W/2249430-2249430 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.956822;DP=3177;DP4=1433,1617,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.44965e-10;MQSB=0.999571;RPB=0.674894;SGB=80.9724;VDB=0.704457;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P97|339|LOC_Os03g04710|protein_coding|CODING|LOC_Os03g04710.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P97|333|LOC_Os03g04710|protein_coding|CODING|LOC_Os03g04710.2|1|1) FN1293-S.SNP.3:2281529 chr03:002281529 0 W/2281529-2281529 FN1293-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1571-S.SNP.3:2281893 chr03:002281893 0 W/2281893-2281893 FN1571-S Single Base Substitution T-C INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2671-S.SNP.3:2282972 chr03:002282972 0 W/2282972-2282972 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.616763;DP=4645;DP4=2149,2303,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19051e-11;MQSB=0.981843;RPB=0.952756;SGB=32.0901;VDB=0.680419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F707L|983|LOC_Os03g04800|protein_coding|CODING|LOC_Os03g04800.1|1|1) FN731-S.SNP.3:2287852 chr03:002287852 0 W/2287852-2287852 FN731-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g04810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2674-S.SNP.3:2288728 chr03:002288728 0 W/2288728-2288728 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.911373;DP=4612;DP4=2260,2117,7,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000216826;MQB=0.00228594;MQSB=1.08181e-09;RPB=0.689897;SGB=49.6594;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.3:2294012 chr03:002294012 0 W/2294012-2294012 FN3504-S SNP C -> A AC=1;AN=188;BQB=0.656608;DP=2709;DP4=1386,1261,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0036914;MQB=0.00354742;MQSB=0.809;RPB=0.662572;SGB=25.3545;VDB=0.0478482;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.3:2299028 chr03:002299028 0 W/2299028-2299028 FN882-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN-308.SNP.3:2300717 chr03:002300717 0 W/2300717-2300717 FN-308 Single Base Substitution C-T INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN469-S.SNP.3:2316408 chr03:002316408 0 W/2316408-2316408 FN469-S Single Base Substitution C-T INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2631-S.SNP.3:2324308 chr03:002324308 0 W/2324308-2324308 FN2631-S SNP A -> T AC=1;AN=200;BQB=0.99283;DP=4966;DP4=2461,2275,17,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00342328;MQB=0.0268762;MQSB=0.0237561;RPB=0.100036;SGB=31.9623;VDB=0.643882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M1652L|1776|LOC_Os03g04860|protein_coding|CODING|LOC_Os03g04860.1|2|1) FN439-S.SNP.3:2327392 chr03:002327392 0 W/2327392-2327392 FN439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN4174-S.SNP.3:2328987 chr03:002328987 0 W/2328987-2328987 FN4174-S SNP A -> T AC=1;AN=170;BQB=0.714099;DP=2261;DP4=1017,1191,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000301518;MQSB=0.356692;RPB=0.425529;SGB=17.6652;VDB=0.88126;EFF=INTRON(MODIFIER||||331|LOC_Os03g04870|protein_coding|CODING|LOC_Os03g04870.1|1|1) FN1176-S.SNP.3:2331778 chr03:002331778 0 W/2331778-2331778 FN1176-S Single Base Substitution A-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2530-S.SNP.3:2336111 chr03:002336111 0 W/2336111-2336111 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.412569;DP=4154;DP4=2219,1721,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70894e-06;MQSB=0.988995;RPB=0.468322;SGB=50.9344;VDB=0.927524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.3:2343804 chr03:002343804 0 W/2343804-2343804 FN2449 SNP C -> T AC=2;AN=200;BQB=0.788495;DP=5016;DP4=2410,2349,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.71291e-26;MQSB=0.976609;RPB=0.916574;SGB=141.214;VDB=0.618335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:2346431 chr03:002346431 0 W/2346431-2346431 FN2780-S SNP A -> T AC=1;AN=198;BQB=0.208819;DP=4221;DP4=2046,1894,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000236911;MQB=1.0086e-07;MQSB=0.98643;RPB=0.99068;SGB=40.149;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.3:2349082 chr03:002349082 0 W/2349082-2349082 FN4107-S SNP T -> A AC=2;AN=182;BQB=0.993961;DP=2720;DP4=1277,1373,11,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.14732e-15;MQSB=0.75198;RPB=0.209806;SGB=111.774;VDB=0.658103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.3:2358939 chr03:002358939 0 W/2358939-2358939 FN3857-S SNP T -> G AC=1;AN=158;BQB=0.810848;DP=2474;DP4=1371,1012,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.0598221;MQB=0.161176;MQSB=2.65923e-06;RPB=0.927234;SGB=28.5576;VDB=0.474316;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.3:2367273 chr03:002367273 0 W/2367273-2367273 FN337-S Single Base Substitution A-G INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN533-S.SNP.3:2408287 chr03:002408287 0 W/2408287-2408287 FN533-S Single Base Substitution G-T INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2659-S.SNP.3:2408863 chr03:002408863 0 W/2408863-2408863 FN2659-S SNP G -> T AC=1;AN=200;BQB=0.428955;DP=4566;DP4=2483,1865,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95681e-09;MQSB=0.772137;RPB=0.947102;SGB=26.8797;VDB=0.529791;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.3:2413099 chr03:002413099 0 W/2413099-2413099 FN1333-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g04980 PHD-finger domain containing protein, putative, expressed SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN4106-S.SNP.3:2417764 chr03:002417764 0 W/2417764-2417764 FN4106-S SNP A -> G AC=1;AN=182;BQB=0.784768;DP=3093;DP4=1593,1424,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.09037e-05;MQSB=0.999845;RPB=0.989856;SGB=25.0952;VDB=0.0478483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T472A|901|LOC_Os03g04990|protein_coding|CODING|LOC_Os03g04990.1|4|1) FN1022-S.SNP.3:2423051 chr03:002423051 0 W/2423051-2423051 FN1022-S Single Base Substitution G-T INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN-342.SNP.3:2423689 chr03:002423689 0 W/2423689-2423689 FN-342 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05000 retrotransposon protein, putative, unclassified, expressed SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN_822-5-1.SNP.3:2425477 chr03:002425477 0 W/2425477-2425477 FN_822-5-1 Single Base Substitution C-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1435-S.SNP.3:2428373 chr03:002428373 0 W/2428373-2428373 FN1435-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05010 retrotransposon protein, putative, unclassified, expressed SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN743-S.SNP.3:2436427 chr03:002436427 0 W/2436427-2436427 FN743-S Single Base Substitution C-T INTRON HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2595-S.SNP.3:2439781 chr03:002439781 0 W/2439781-2439781 FN2595-S SNP T -> A AC=1;AN=198;BQB=0.99844;DP=4259;DP4=1927,2191,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02772e-11;MQSB=0.716431;RPB=0.850386;SGB=54.5295;VDB=0.443079;EFF=INTRON(MODIFIER||||1184|LOC_Os03g05020|protein_coding|CODING|LOC_Os03g05020.1|10|1) FN2706-S.SNP.3:2443152 chr03:002443152 0 W/2443152-2443152 FN2706-S SNP T -> C AC=2;AN=200;BQB=0.0138653;DP=4627;DP4=2191,2233,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.17316e-18;MQSB=0.979312;RPB=0.880813;SGB=-3.42751;VDB=0.411067;EFF=INTRON(MODIFIER||||1184|LOC_Os03g05020|protein_coding|CODING|LOC_Os03g05020.1|15|1) FN3997-S.SNP.3:2445288 chr03:002445288 0 W/2445288-2445288 FN3997-S SNP G -> A AC=1;AN=168;BQB=0.975831;DP=2651;DP4=1218,1315,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.10326e-09;MQSB=0.784206;RPB=0.134017;SGB=56.6036;VDB=0.749658;EFF=INTRON(MODIFIER||||1184|LOC_Os03g05020|protein_coding|CODING|LOC_Os03g05020.1|20|1) FN2175-S.SNP.3:2449640 chr03:002449640 0 W/2449640-2449640 FN2175-S SNP T -> C AC=1;AN=168;BQB=0.00789305;DP=2292;DP4=860,1352,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00279919;MQSB=0.416092;RPB=0.243531;SGB=-112.21;VDB=0.337804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I72T|275|LOC_Os03g05030|protein_coding|CODING|LOC_Os03g05030.1|1|1) FN2268-S.SNP.3:2456169 chr03:002456169 0 W/2456169-2456169 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.294783;DP=3646;DP4=1682,1510,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00219419;MQB=0.0201502;MQSB=1.07245e-06;RPB=0.902146;SGB=21.8853;VDB=0.0153373;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.3:2471761 chr03:002471761 0 W/2471761-2471761 FN728-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2138-S.SNP.3:2473544 chr03:002473544 0 W/2473544-2473544 FN2138-S SNP A -> T AC=1;AN=168;BQB=0.675557;DP=3623;DP4=1711,1861,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.78691e-08;MQSB=0.981012;RPB=0.555698;SGB=-64.9298;VDB=0.287297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.3:2478103 chr03:002478103 0 W/2478103-2478103 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.602535;DP=4044;DP4=1817,2020,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.26186e-10;MQSB=0.976274;RPB=0.439293;SGB=54.5295;VDB=0.314481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.3:2478312 chr03:002478312 0 W/2478312-2478312 FN2252-S SNP C -> A AC=1;AN=190;BQB=0.379963;DP=4474;DP4=1767,2312,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.36911e-06;MQSB=0.966442;RPB=0.550177;SGB=-2.10437;VDB=0.695687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.3:2478880 chr03:002478880 0 W/2478880-2478880 FN2241-S SNP C -> T AC=1;AN=190;BQB=0.848284;DP=3413;DP4=1534,1427,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00765049;MQSB=0.0727601;RPB=0.978612;SGB=30.8803;VDB=0.519034;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.3:2490936 chr03:002490936 0 W/2490936-2490936 FN420-S Single Base Substitution A-C INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN3527-S.SNP.3:2494524 chr03:002494524 0 W/2494524-2494524 FN3527-S SNP C -> G AC=1;AN=188;BQB=0.859623;DP=3529;DP4=2199,1253,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.25549e-05;MQSB=0.0024498;RPB=0.999493;SGB=39.8925;VDB=0.910125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G87R|132|LOC_Os03g05130|protein_coding|CODING|LOC_Os03g05130.1|1|1) FN2458.SNP.3:2497033 chr03:002497033 0 W/2497033-2497033 FN2458 SNP C -> T AC=1;AN=200;BQB=0.0495876;DP=4149;DP4=2100,1772,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.85918e-08;MQSB=0.982012;RPB=0.660846;SGB=72.6852;VDB=0.918552;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R622|1030|LOC_Os03g05140|protein_coding|CODING|LOC_Os03g05140.1|1|1) FN3712-S.SNP.3:2500697 chr03:002500697 0 W/2500697-2500697 FN3712-S SNP A -> G AC=2;AN=190;BQB=0.998251;DP=2880;DP4=1290,1445,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5613e-14;MQSB=0.976229;RPB=0.512604;SGB=85.8548;VDB=0.577208;EFF=INTRON(MODIFIER||||102|LOC_Os03g05150|protein_coding|CODING|LOC_Os03g05150.1|2|1) FN2374.SNP.3:2502115 chr03:002502115 0 W/2502115-2502115 FN2374 SNP G -> T AC=2;AN=192;BQB=0.501381;DP=5013;DP4=2069,2656,20,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.51549e-21;MQSB=0.999582;RPB=0.68164;SGB=-149.516;VDB=0.382907;EFF=INTERGENIC(MODIFIER||||||||||1) FN317-S.SNP.3:2505446 chr03:002505446 0 W/2505446-2505446 FN317-S Single Base Substitution T-C INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3834-S.SNP.3:2512140 chr03:002512140 0 W/2512140-2512140 FN3834-S SNP T -> C AC=1;AN=190;BQB=0.957099;DP=2537;DP4=1304,1173,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38504e-07;MQSB=0.952857;RPB=0.796311;SGB=44.5415;VDB=0.702665;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.3:2513219 chr03:002513219 0 W/2513219-2513219 FN882-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g05180 expressed protein SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN1353-S.SNP.3:2513243 chr03:002513243 0 W/2513243-2513243 FN1353-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g05180 expressed protein SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN450-S.SNP.3:2525957 chr03:002525957 0 W/2525957-2525957 FN450-S Single Base Substitution A-C START_GAINED HET LOC_Os03g05200 DENN domain containing protein, expressed SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN579-S.SNP.3:2530312 chr03:002530312 0 W/2530312-2530312 FN579-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g05210 WD domain, G-beta repeat domain containing protein, expressed SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2190-S.SNP.3:2531692 chr03:002531692 0 W/2531692-2531692 FN2190-S SNP A -> T AC=1;AN=190;BQB=0.24556;DP=4924;DP4=2294,2223,18,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.41916e-16;MQSB=0.916712;RPB=0.558296;SGB=-45.2469;VDB=0.713632;EFF=UTR_3_PRIME(MODIFIER||30||114|LOC_Os03g05220|protein_coding|CODING|LOC_Os03g05220.2|2|1),INTRON(MODIFIER||||107|LOC_Os03g05220|protein_coding|CODING|LOC_Os03g05220.1|3|1),INTRON(MODIFIER||||109|LOC_Os03g05220|protein_coding|CODING|LOC_Os03g05220.3|2|1) FN1496-S.SNP.3:2535376 chr03:002535376 0 W/2535376-2535376 FN1496-S Single Base Substitution T-C INTRON Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2725-S.SNP.3:2537993 chr03:002537993 0 W/2537993-2537993 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.921015;DP=5157;DP4=2504,2397,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81629e-16;MQSB=0.982748;RPB=0.976489;SGB=83.5316;VDB=0.603993;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.3:2548889 chr03:002548889 0 W/2548889-2548889 FN821-S Single Base Substitution A-T INTERGENIC HOMO SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN-231.SNP.3:2553157 chr03:002553157 0 W/2553157-2553157 FN-231 Single Base Substitution C-A INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1103-S.SNP.3:2553157 chr03:002553157 0 W/2553157-2553157 FN1103-S Single Base Substitution C-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2690-S.SNP.3:2553157 chr03:002553157 0 W/2553157-2553157 FN2690-S SNP C -> A AC=2;AN=200;BQB=0.00968462;DP=5077;DP4=2644,2197,13,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.02919e-16;MQSB=0.999754;RPB=0.932937;SGB=87.1368;VDB=0.890517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.3:2553157 chr03:002553157 0 W/2553157-2553157 FN3484-S SNP C -> A AC=2;AN=184;BQB=0.496308;DP=3951;DP4=2362,1442,41,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27077e-27;MQSB=0.953585;RPB=0.24077;SGB=183.663;VDB=0.915522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:2566882 chr03:002566882 0 W/2566882-2566882 FN2780-S SNP A -> G AC=1;AN=198;BQB=0.254766;DP=4237;DP4=2067,1996,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.23807e-07;MQSB=0.968696;RPB=0.97788;SGB=36.5539;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.3:2572393 chr03:002572393 0 W/2572393-2572393 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.844299;DP=2694;DP4=1564,1018,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08472e-05;MQSB=0.999749;RPB=0.876774;SGB=49.0954;VDB=0.173134;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I44|90|LOC_Os03g05300|protein_coding|CODING|LOC_Os03g05300.1|3|1) FN448-S.SNP.3:2599867 chr03:002599867 0 W/2599867-2599867 FN448-S Single Base Substitution T-C INTRON HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. 702-8.SNP.3:2607409 chr03:002607409 0 W/2607409-2607409 702-8 Single Base Substitution C-T INTERGENIC Homo SNo: 1449, Mutant_ID: 702-8, Generation: M2, Mutations: 12, Genes: 9, Seed availability: Yes. FN-74.SNP.3:2610972 chr03:002610972 0 W/2610972-2610972 FN-74 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05340 retrotransposon protein, putative, unclassified, expressed SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN_789-2-1.SNP.3:2613201 chr03:002613201 0 W/2613201-2613201 FN_789-2-1 Single Base Substitution G-A HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2449.SNP.3:2620816 chr03:002620816 0 W/2620816-2620816 FN2449 SNP C -> T AC=2;AN=200;BQB=0.232701;DP=4622;DP4=2093,2258,17,12;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.00519256;MQB=0.447002;MQSB=0.00441951;RPB=0.96919;SGB=127.947;VDB=0.28257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R385W|1461|LOC_Os03g05350|protein_coding|CODING|LOC_Os03g05350.1|1|1) FN4050-S.SNP.3:2623303 chr03:002623303 0 W/2623303-2623303 FN4050-S SNP C -> T AC=1;AN=168;BQB=0.999937;DP=5816;DP4=2654,2940,30,23;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.0493466;MQB=0.498511;MQSB=1.9988e-28;RPB=0.774241;SGB=57.1309;VDB=0.539792;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1214W|1461|LOC_Os03g05350|protein_coding|CODING|LOC_Os03g05350.1|1|1) FN3381-S.SNP.3:2626447 chr03:002626447 0 W/2626447-2626447 FN3381-S SNP T -> C AC=1;AN=184;BQB=0.99858;DP=2646;DP4=1171,1355,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.81685e-07;MQSB=0.990529;RPB=0.931921;SGB=15.7097;VDB=0.694975;EFF=INTRON(MODIFIER||||2453|LOC_Os03g05360|protein_coding|CODING|LOC_Os03g05360.1|13|1) FN4224-S.SNP.3:2628018 chr03:002628018 0 W/2628018-2628018 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.781842;DP=2850;DP4=1256,1511,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.5436e-09;MQSB=0.818708;RPB=0.480438;SGB=78.9707;VDB=0.152554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S1671L|2453|LOC_Os03g05360|protein_coding|CODING|LOC_Os03g05360.1|12|1) FN409-S.SNP.3:2628866 chr03:002628866 0 W/2628866-2628866 FN409-S Single Base Substitution T-G INTRON HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN4325-S.SNP.3:2640353 chr03:002640353 0 W/2640353-2640353 FN4325-S SNP T -> C AC=1;AN=170;BQB=0.919157;DP=2698;DP4=1217,1388,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.51517e-10;MQSB=0.986283;RPB=0.461717;SGB=48.6486;VDB=0.02813;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N309|349|LOC_Os03g05370|protein_coding|CODING|LOC_Os03g05370.1|2|1) FN3903-S.SNP.3:2646989 chr03:002646989 0 W/2646989-2646989 FN3903-S SNP T -> A AC=1;AN=158;BQB=0.991408;DP=2711;DP4=1233,1360,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.68418e-08;MQSB=0.989197;RPB=0.572645;SGB=34.0735;VDB=0.526918;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.3:2648742 chr03:002648742 0 W/2648742-2648742 FN-202 Single Base Substitution C-T INTERGENIC HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN-202.SNP.3:2648743 chr03:002648743 0 W/2648743-2648743 FN-202 Single Base Substitution C-T INTERGENIC HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN1205-S.SNP.3:2652441 chr03:002652441 0 W/2652441-2652441 FN1205-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1737-S.SNP.3:2655683 chr03:002655683 0 W/2655683-2655683 FN1737-S SNP C -> G AC=1;AN=188;BQB=0.998538;DP=3547;DP4=2309,1185,22,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.82291e-14;MQSB=0.970206;RPB=0.495778;SGB=-43.3017;VDB=0.618851;EFF=INTRON(MODIFIER||||557|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.3|1|1),INTRON(MODIFIER||||527|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.8|1|1),INTRON(MODIFIER||||527|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.12|1|1),INTRON(MODIFIER||||479|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.13|1|1),INTRON(MODIFIER||||557|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.2|1|1),INTRON(MODIFIER||||527|LOC_Os03g05390|protein_coding|CODING|LOC_Os03g05390.7|1|1) FN995-S.SNP.3:2656107 chr03:002656107 0 W/2656107-2656107 FN995-S Single Base Substitution C-T INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN982-S.SNP.3:2660513 chr03:002660513 0 W/2660513-2660513 FN982-S Single Base Substitution A-T INTRON HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN_543-2-6.SNP.3:2661374 chr03:002661374 0 W/2661374-2661374 FN_543-2-6 Single Base Substitution C-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3554-S.SNP.3:2665817 chr03:002665817 0 W/2665817-2665817 FN3554-S SNP T -> C AC=1;AN=188;BQB=0.927186;DP=2864;DP4=1470,1339,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.52271e-07;MQSB=0.658562;RPB=0.294027;SGB=44.4357;VDB=0.265497;EFF=INTRON(MODIFIER||||409|LOC_Os03g05400|protein_coding|CODING|LOC_Os03g05400.1|1|1) FN2689-S.SNP.3:2671127 chr03:002671127 0 W/2671127-2671127 FN2689-S SNP T -> A AC=1;AN=200;BQB=0.999354;DP=5391;DP4=2468,2727,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.59225e-08;MQSB=0.999428;RPB=0.870459;SGB=40.2696;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.3:2679817 chr03:002679817 0 W/2679817-2679817 FN849-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g05420 MT-A70 domain containing protein, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN761-S.SNP.3:2683274 chr03:002683274 0 W/2683274-2683274 FN761-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g05430 peptidase, putative, expressed SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3310-S.SNP.3:2684805 chr03:002684805 0 W/2684805-2684805 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.973034;DP=2708;DP4=1243,1385,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00353e-06;MQSB=0.999309;RPB=0.97883;SGB=48.7425;VDB=0.173134;EFF=INTRON(MODIFIER||||166|LOC_Os03g05430|protein_coding|CODING|LOC_Os03g05430.1|4|1),INTRON(MODIFIER||||70|LOC_Os03g05430|protein_coding|CODING|LOC_Os03g05430.2|3|1) FN3997-S.SNP.3:2684927 chr03:002684927 0 W/2684927-2684927 FN3997-S SNP T -> C AC=1;AN=168;BQB=0.406577;DP=2813;DP4=1115,1525,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.52934e-08;MQSB=0.995036;RPB=0.48755;SGB=51.902;VDB=0.846152;EFF=INTRON(MODIFIER||||166|LOC_Os03g05430|protein_coding|CODING|LOC_Os03g05430.1|4|1),INTRON(MODIFIER||||70|LOC_Os03g05430|protein_coding|CODING|LOC_Os03g05430.2|3|1) FN_827-1.SNP.3:2688766 chr03:002688766 0 W/2688766-2688766 FN_827-1 Single Base Substitution C-T Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1329-S.SNP.3:2692327 chr03:002692327 0 W/2692327-2692327 FN1329-S Single Base Substitution T-C INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN681-S.SNP.3:2701844 chr03:002701844 0 W/2701844-2701844 FN681-S Single Base Substitution C-T INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1572-S.SNP.3:2702327 chr03:002702327 0 W/2702327-2702327 FN1572-S Single Base Substitution A-G INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3325-S.SNP.3:2703594 chr03:002703594 0 W/2703594-2703594 FN3325-S SNP C -> A AC=1;AN=184;BQB=0.572879;DP=3824;DP4=1353,2310,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.46221e-07;MQSB=0.995516;RPB=0.978575;SGB=18.2315;VDB=0.149077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.3:2704645 chr03:002704645 0 W/2704645-2704645 FN1283-S Single Base Substitution C-T INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3629-S.SNP.3:2736860 chr03:002736860 0 W/2736860-2736860 FN3629-S SNP G -> A AC=1;AN=190;BQB=0.71971;DP=2722;DP4=1487,1128,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40618e-08;MQSB=0.820075;RPB=0.874538;SGB=23.6597;VDB=0.248028;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.3:2737268 chr03:002737268 0 W/2737268-2737268 FN-190 Single Base Substitution G-A INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN579-S.SNP.3:2737460 chr03:002737460 0 W/2737460-2737460 FN579-S Single Base Substitution C-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN-92.SNP.3:2737638 chr03:002737638 0 W/2737638-2737638 FN-92 Single Base Substitution C-G INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1310-S.SNP.3:2737967 chr03:002737967 0 W/2737967-2737967 FN1310-S Single Base Substitution A-G INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN4025-S.SNP.3:2738129 chr03:002738129 0 W/2738129-2738129 FN4025-S SNP A -> T AC=1;AN=168;BQB=0.903479;DP=2633;DP4=1156,1291,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.11622e-10;MQSB=0.974947;RPB=0.636209;SGB=24.6155;VDB=0.807779;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.3:2739175 chr03:002739175 0 W/2739175-2739175 FN596-S Single Base Substitution G-A INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2621-S.SNP.3:2743426 chr03:002743426 0 W/2743426-2743426 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.920841;DP=4007;DP4=2100,1665,12,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.32244e-06;MQSB=0.238658;RPB=0.294912;SGB=61.9006;VDB=0.0294767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.3:2746316 chr03:002746316 0 W/2746316-2746316 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.321868;DP=3379;DP4=1714,1496,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000295946;MQB=1.74531e-08;MQSB=2.85103e-05;RPB=0.984804;SGB=50.9344;VDB=0.519602;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.3:2747169 chr03:002747169 0 W/2747169-2747169 FN1426-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1471-S.SNP.3:2747277 chr03:002747277 0 W/2747277-2747277 FN1471-S SNP T -> C AC=1;AN=188;BQB=0.939893;DP=3616;DP4=1704,1875,4,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.31927e-08;MQSB=0.771544;RPB=0.16433;SGB=8.62479;VDB=0.159865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.3:2756771 chr03:002756771 0 W/2756771-2756771 FN1093-S Single Base Substitution G-A INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-216.SNP.3:2757533 chr03:002757533 0 W/2757533-2757533 FN-216 Single Base Substitution G-T INTERGENIC HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN1234-S.SNP.3:2759424 chr03:002759424 0 W/2759424-2759424 FN1234-S Single Base Substitution A-C INTRON HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN-341.SNP.3:2766378 chr03:002766378 0 W/2766378-2766378 FN-341 Single Base Substitution G-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2204-S.SNP.3:2766994 chr03:002766994 0 W/2766994-2766994 FN2204-S SNP T -> G AC=1;AN=190;BQB=0.557274;DP=3793;DP4=1932,1480,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.96125e-13;MQSB=0.659244;RPB=0.125777;SGB=-8.23709;VDB=0.398663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.3:2773955 chr03:002773955 0 W/2773955-2773955 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1916.SNP.3:2774557 chr03:002774557 0 W/2774557-2774557 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1916.SNP.3:2774558 chr03:002774558 0 W/2774558-2774558 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1916.SNP.3:2774561 chr03:002774561 0 W/2774561-2774561 FN1916 Single Base Substitution G-C Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN-406.SNP.3:2774966 chr03:002774966 0 W/2774966-2774966 FN-406 Single Base Substitution G-T INTERGENIC HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4234-S.SNP.3:2776482 chr03:002776482 0 W/2776482-2776482 FN4234-S SNP A -> T AC=1;AN=170;BQB=0.938719;DP=2395;DP4=855,933,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.0596326;MQSB=0.990979;RPB=0.558583;SGB=17.6652;VDB=0.182239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:2779069 chr03:002779069 0 W/2779069-2779069 FN2752-S SNP A -> C AC=2;AN=200;BQB=0.314789;DP=5025;DP4=2398,2372,13,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03453e-19;MQSB=0.987516;RPB=0.342771;SGB=39.9882;VDB=0.813271;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.3:2780561 chr03:002780561 0 W/2780561-2780561 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.829084;DP=2789;DP4=1280,1409,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000191761;MQSB=0.985728;RPB=0.803621;SGB=10.8904;VDB=0.912212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.3:2781068 chr03:002781068 0 W/2781068-2781068 FN1261-S Single Base Substitution C-G INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-106.SNP.3:2781255 chr03:002781255 0 W/2781255-2781255 FN-106 Single Base Substitution G-A INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2767-S.SNP.3:2789681 chr03:002789681 0 W/2789681-2789681 FN2767-S SNP A -> T AC=1;AN=198;BQB=0.915851;DP=4242;DP4=2224,1767,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0219236;MQB=0.94696;MQSB=4.45637e-28;RPB=0.983668;SGB=61.7198;VDB=0.781662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.3:2793590 chr03:002793590 0 W/2793590-2793590 FN1282-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05580 expressed protein SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3466-S.SNP.3:2793864 chr03:002793864 0 W/2793864-2793864 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.941882;DP=2885;DP4=1371,1432,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.55575e-09;MQSB=0.93967;RPB=0.113212;SGB=75.8731;VDB=0.170079;EFF=INTRON(MODIFIER||||59|LOC_Os03g05580|protein_coding|CODING|LOC_Os03g05580.1|1|1) FN692-S.SNP.3:2796346 chr03:002796346 0 W/2796346-2796346 FN692-S Single Base Substitution G-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-105.SNP.3:2796713 chr03:002796713 0 W/2796713-2796713 FN-105 Single Base Substitution T-C INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2470.SNP.3:2808149 chr03:002808149 0 W/2808149-2808149 FN2470 SNP A -> G AC=1;AN=200;BQB=0.698253;DP=4521;DP4=1680,2207,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00022119;MQB=9.47358e-13;MQSB=0.976817;RPB=0.218346;SGB=47.7211;VDB=0.316827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I443T|527|LOC_Os03g05620|protein_coding|CODING|LOC_Os03g05620.1|1|1) FN1514-S.SNP.3:2813158 chr03:002813158 0 W/2813158-2813158 FN1514-S Single Base Substitution G-A INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN912-S.SNP.3:2813584 chr03:002813584 0 W/2813584-2813584 FN912-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN-197.SNP.3:2814563 chr03:002814563 0 W/2814563-2814563 FN-197 Single Base Substitution C-T INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN4080-S.SNP.3:2823653 chr03:002823653 0 W/2823653-2823653 FN4080-S SNP T -> A AC=1;AN=182;BQB=0.971009;DP=2884;DP4=1508,1286,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.80812e-08;MQSB=0.99959;RPB=0.623455;SGB=39.1386;VDB=0.686276;EFF=SPLICE_SITE_REGION(LOW||||395|LOC_Os03g05660|protein_coding|CODING|LOC_Os03g05660.1|12|1),INTRON(MODIFIER||||395|LOC_Os03g05660|protein_coding|CODING|LOC_Os03g05660.1|12|1) FN367-S.SNP.3:2828585 chr03:002828585 0 W/2828585-2828585 FN367-S Single Base Substitution G-T INTERGENIC HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2171-S.SNP.3:2828938 chr03:002828938 0 W/2828938-2828938 FN2171-S SNP A -> C AC=1;AN=168;BQB=0.0518608;DP=4121;DP4=2013,2069,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77796e-14;MQSB=0.987965;RPB=0.998551;SGB=-43.4892;VDB=0.0715065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.3:2831837 chr03:002831837 0 W/2831837-2831837 FN1093-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05670 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1204-S.SNP.3:2834823 chr03:002834823 0 W/2834823-2834823 FN1204-S Single Base Substitution A-G INTRON HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1638-S.SNP.3:2860921 chr03:002860921 0 W/2860921-2860921 FN1638-S Single Base Substitution G-A INTERGENIC Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2489.SNP.3:2869040 chr03:002869040 0 W/2869040-2869040 FN2489 SNP T -> C AC=2;AN=200;BQB=0.197626;DP=4507;DP4=2261,1821,25,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.47472e-20;MQSB=0.471535;RPB=0.954663;SGB=144.819;VDB=0.0812663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.3:2872339 chr03:002872339 0 W/2872339-2872339 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.158583;DP=5006;DP4=2655,2199,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.46411e-09;MQSB=0.908196;RPB=0.356079;SGB=7.88476;VDB=0.603272;EFF=INTRON(MODIFIER||||231|LOC_Os03g05760|protein_coding|CODING|LOC_Os03g05760.1|3|1) FN1234-S.SNP.3:2873936 chr03:002873936 0 W/2873936-2873936 FN1234-S Single Base Substitution T-G INTRON HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN981-S.SNP.3:2886797 chr03:002886797 0 W/2886797-2886797 FN981-S Single Base Substitution T-C INTRON HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-372.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN-372 Single Base Substitution G-A INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1494-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN1494-S Single Base Substitution G-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2172-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN2172-S SNP G -> A AC=1;AN=168;BQB=0.0335564;DP=3645;DP4=1965,1609,21,20;HOB=7.08617e-05;ICB=0.000142567;MQ=31;MQ0F=0.112209;MQB=0.957623;MQSB=1.35734e-13;RPB=0.301253;SGB=-232.588;VDB=0.972204;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN230-S Single Base Substitution G-A INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3400-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN3400-S SNP G -> A AC=1;AN=184;BQB=0.864408;DP=2926;DP4=993,1810,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0345181;MQB=0.956816;MQSB=0.869597;RPB=0.279502;SGB=53.3568;VDB=0.301887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN3795-S SNP G -> A AC=2;AN=190;BQB=0.769528;DP=2898;DP4=874,1865,12,22;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0341615;MQB=0.980429;MQSB=0.0822603;RPB=0.0312498;SGB=72.1834;VDB=0.0695705;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN3957-S SNP G -> A AC=1;AN=168;BQB=0.850619;DP=2569;DP4=776,1638,4,13;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0428182;MQB=0.946321;MQSB=0.754871;RPB=0.83819;SGB=27.0464;VDB=0.602499;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN4148-S SNP G -> A AC=1;AN=170;BQB=0.659572;DP=2388;DP4=773,1517,4,16;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0448074;MQB=0.987477;MQSB=0.000248952;RPB=0.000942039;SGB=58.9766;VDB=0.516751;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.3:2893819 chr03:002893819 0 W/2893819-2893819 FN713-S Single Base Substitution G-A INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1475-S.SNP.3:2894154 chr03:002894154 0 W/2894154-2894154 FN1475-S Single Base Substitution A-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2120-S.SNP.3:2895789 chr03:002895789 0 W/2895789-2895789 FN2120-S SNP G -> C AC=1;AN=168;BQB=0.389;DP=4067;DP4=2178,1845,16,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92913e-13;MQSB=0.999883;RPB=0.925904;SGB=-43.4892;VDB=0.565472;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.3:2908560 chr03:002908560 0 W/2908560-2908560 FN_N1-220-1 Single Base Substitution G-A HET LOC_Os03g05812 expressed protein SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN450-S.SNP.3:2919083 chr03:002919083 0 W/2919083-2919083 FN450-S Single Base Substitution T-A INTRON HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN2375.SNP.3:2925793 chr03:002925793 0 W/2925793-2925793 FN2375 SNP A -> T AC=1;AN=192;BQB=0.670871;DP=4925;DP4=2051,2540,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.79895e-09;MQSB=0.499061;RPB=0.256336;SGB=39.78;VDB=0.735281;EFF=INTRON(MODIFIER||||595|LOC_Os03g05830|protein_coding|CODING|LOC_Os03g05830.1|8|1) FN1459-S.SNP.3:2930333 chr03:002930333 0 W/2930333-2930333 FN1459-S Single Base Substitution T-C INTRON HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2655-S.SNP.3:2934516 chr03:002934516 0 W/2934516-2934516 FN2655-S SNP C -> A AC=1;AN=200;BQB=0.979955;DP=4899;DP4=2412,2156,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.85634e-12;MQSB=0.999897;RPB=0.927864;SGB=14.3054;VDB=0.819061;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.3:2934516 chr03:002934516 0 W/2934516-2934516 FN4272-S SNP C -> A AC=1;AN=170;BQB=0.716014;DP=2739;DP4=1455,1052,14,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.0819e-13;MQSB=0.977696;RPB=0.560071;SGB=14.431;VDB=0.347355;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.3:2939611 chr03:002939611 0 W/2939611-2939611 FN701-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g05850 retrotransposon protein, putative, unclassified, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1413-S.SNP.3:2943197 chr03:002943197 0 W/2943197-2943197 FN1413-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g05860 expressed protein SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3849-S.SNP.3:2960511 chr03:002960511 0 W/2960511-2960511 FN3849-S SNP T -> C AC=1;AN=158;BQB=0.934422;DP=2281;DP4=1080,1062,10,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.61079e-13;MQSB=0.984253;RPB=0.75585;SGB=10.3028;VDB=0.284157;EFF=UTR_3_PRIME(MODIFIER||244||407|LOC_Os03g05900|protein_coding|CODING|LOC_Os03g05900.1|6|1),UTR_3_PRIME(MODIFIER||244||354|LOC_Os03g05900|protein_coding|CODING|LOC_Os03g05900.2|5|1) FN3728-S.SNP.3:2965944 chr03:002965944 0 W/2965944-2965944 FN3728-S SNP C -> A AC=1;AN=190;BQB=0.981922;DP=3119;DP4=1283,1753,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89155e-07;MQSB=0.978763;RPB=0.669633;SGB=36.1006;VDB=0.462868;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V140|406|LOC_Os03g05920|protein_coding|CODING|LOC_Os03g05920.1|4|1) FN3455-S.SNP.3:2967326 chr03:002967326 0 W/2967326-2967326 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.973463;DP=3006;DP4=1719,1200,2,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87169e-06;MQSB=0.387561;RPB=0.942145;SGB=32.2261;VDB=0.509944;EFF=UTR_3_PRIME(MODIFIER||378||406|LOC_Os03g05920|protein_coding|CODING|LOC_Os03g05920.1|6|1) FN679-S.SNP.3:2972363 chr03:002972363 0 W/2972363-2972363 FN679-S Single Base Substitution G-A INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN768-S.SNP.3:2979643 chr03:002979643 0 W/2979643-2979643 FN768-S Single Base Substitution C-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2284.SNP.3:2982305 chr03:002982305 0 W/2982305-2982305 FN2284 SNP T -> C AC=2;AN=192;BQB=0.868864;DP=5021;DP4=2442,2283,22,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.94348e-25;MQSB=0.957333;RPB=0.735434;SGB=143.146;VDB=0.920546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.3:2982815 chr03:002982815 0 W/2982815-2982815 FN2333 SNP T -> C AC=1;AN=192;BQB=0.296105;DP=5446;DP4=2712,2303,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.12382e-09;MQSB=0.000250811;RPB=0.773229;SGB=26.127;VDB=0.478548;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.3:2987476 chr03:002987476 0 W/2987476-2987476 FN3376-S SNP A -> G AC=1;AN=184;BQB=0.973578;DP=3014;DP4=1530,1367,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0132714;MQB=6.2985e-05;MQSB=0.0100232;RPB=0.912965;SGB=56.8786;VDB=0.994357;EFF=SPLICE_SITE_REGION(LOW||||195|LOC_Os03g05980|protein_coding|CODING|LOC_Os03g05980.1|1|1),SPLICE_SITE_REGION(LOW||||158|LOC_Os03g05980|protein_coding|CODING|LOC_Os03g05980.2|1|1),INTRON(MODIFIER||||195|LOC_Os03g05980|protein_coding|CODING|LOC_Os03g05980.1|1|1),INTRON(MODIFIER||||158|LOC_Os03g05980|protein_coding|CODING|LOC_Os03g05980.2|1|1) FN1556-S.SNP.3:2989542 chr03:002989542 0 W/2989542-2989542 FN1556-S Single Base Substitution A-T INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1556-S.SNP.3:2989543 chr03:002989543 0 W/2989543-2989543 FN1556-S Single Base Substitution A-T INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1556-S.SNP.3:2989544 chr03:002989544 0 W/2989544-2989544 FN1556-S Single Base Substitution A-T INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN-339.SNP.3:2991480 chr03:002991480 0 W/2991480-2991480 FN-339 Single Base Substitution A-G INTERGENIC HOMO SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1473-S.SNP.3:2997285 chr03:002997285 0 W/2997285-2997285 FN1473-S Single Base Substitution C-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN450-S.SNP.3:3000453 chr03:003000453 0 W/3000453-3000453 FN450-S Single Base Substitution A-T INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN3368-S.SNP.3:3002696 chr03:003002696 0 W/3002696-3002696 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.943048;DP=3704;DP4=1912,1571,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33451e-11;MQSB=0.998389;RPB=0.814399;SGB=35.884;VDB=0.522331;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.3:3008298 chr03:003008298 0 W/3008298-3008298 FN3396-S SNP G -> T AC=1;AN=184;BQB=0.849723;DP=2981;DP4=1567,1331,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19059e-06;MQSB=0.999893;RPB=0.893614;SGB=39.2697;VDB=0.303442;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.3:3011316 chr03:003011316 0 W/3011316-3011316 FN784-S Single Base Substitution A-C INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN-143.SNP.3:3013509 chr03:003013509 0 W/3013509-3013509 FN-143 Single Base Substitution A-T INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3553-S.SNP.3:3017360 chr03:003017360 0 W/3017360-3017360 FN3553-S SNP G -> A AC=2;AN=188;BQB=0.398017;DP=3238;DP4=1345,1802,17,27;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000308833;MQB=3.67429e-18;MQSB=0.874073;RPB=0.426954;SGB=145.826;VDB=0.434533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.3:3028611 chr03:003028611 0 W/3028611-3028611 FN3372-S SNP C -> T AC=1;AN=184;BQB=0.788754;DP=3047;DP4=1208,1742,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.4696e-06;MQSB=0.767316;RPB=0.547016;SGB=21.6609;VDB=0.726018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1293-S.SNP.3:3030887 chr03:003030887 0 W/3030887-3030887 FN1293-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1057-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN1057-S Single Base Substitution T-A INTERGENIC HOMO SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1295-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN1295-S Single Base Substitution T-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1685-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN1685-S SNP T -> A AC=1;AN=180;BQB=0.903726;DP=693;DP4=267,359,5,2;HOB=6.17284e-05;ICB=0.000124143;MQ=47;MQ0F=0.012987;MQB=0.0111772;MQSB=0.992445;RPB=0.98977;SGB=14.7255;VDB=0.187019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN2602-S SNP T -> A AC=1;AN=198;BQB=0.00108382;DP=2751;DP4=845,1492,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00727008;MQB=0.0556633;MQSB=0.397442;RPB=0.961191;SGB=-71.3913;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN3837-S SNP T -> A AC=1;AN=190;BQB=0.148422;DP=1514;DP4=334,1009,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00528402;MQB=0.0046168;MQSB=0.613669;RPB=0.873086;SGB=-13.7759;VDB=0.90936;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN543-S Single Base Substitution T-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN990-S.SNP.3:3032084 chr03:003032084 0 W/3032084-3032084 FN990-S Single Base Substitution T-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-139.SNP.3:3033643 chr03:003033643 0 W/3033643-3033643 FN-139 Single Base Substitution C-T INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2151-S.SNP.3:3037308 chr03:003037308 0 W/3037308-3037308 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.916258;DP=2167;DP4=904,1224,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27521e-05;MQSB=0.0786898;RPB=0.990852;SGB=27.8864;VDB=0.829708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G83D|240|LOC_Os03g06060|protein_coding|CODING|LOC_Os03g06060.1|2|1) FN910-S.SNP.3:3039189 chr03:003039189 0 W/3039189-3039189 FN910-S Single Base Substitution A-G INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3778-S.SNP.3:3051814 chr03:003051814 0 W/3051814-3051814 FN3778-S SNP A -> C AC=1;AN=190;BQB=0.523335;DP=2919;DP4=1497,1158,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000342583;MQB=4.31322e-09;MQSB=0.9236;RPB=0.0974035;SGB=-67.5498;VDB=0.234148;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.3:3054865 chr03:003054865 0 W/3054865-3054865 FN553-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g06100 retrotransposon protein, putative, unclassified, expressed SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1340-S.SNP.3:3058254 chr03:003058254 0 W/3058254-3058254 FN1340-S Single Base Substitution A-C INTRON HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1064-S.SNP.3:3059637 chr03:003059637 0 W/3059637-3059637 FN1064-S Single Base Substitution C-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2130-S.SNP.3:3059637 chr03:003059637 0 W/3059637-3059637 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.0236733;DP=1841;DP4=1129,657,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0396524;MQB=0.018394;MQSB=1.06687e-07;RPB=0.116772;SGB=8.48314;VDB=0.627504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.3:3059637 chr03:003059637 0 W/3059637-3059637 FN3324-S SNP C -> T AC=2;AN=184;BQB=0.404203;DP=3752;DP4=1888,1730,20,15;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0263859;MQB=5.04606e-07;MQSB=6.41852e-09;RPB=0.745881;SGB=152.744;VDB=0.182763;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.3:3059637 chr03:003059637 0 W/3059637-3059637 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.851944;DP=2326;DP4=1254,1002,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.027515;MQB=0.0089215;MQSB=0.000349672;RPB=0.924099;SGB=43.4296;VDB=0.702665;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.3:3059637 chr03:003059637 0 W/3059637-3059637 FN551-S Single Base Substitution C-T INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN1606-S.SNP.3:3062859 chr03:003062859 0 W/3062859-3062859 FN1606-S Single Base Substitution G-A STOP_GAINED HET LOC_Os03g06110 retrotransposon protein, putative, unclassified, expressed SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN854-S.SNP.3:3064147 chr03:003064147 0 W/3064147-3064147 FN854-S Single Base Substitution A-T INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2676-S.SNP.3:3068188 chr03:003068188 0 W/3068188-3068188 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.983099;DP=5218;DP4=2420,2489,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20244e-09;MQSB=0.997589;RPB=0.239251;SGB=21.6694;VDB=0.808233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.3:3075107 chr03:003075107 0 W/3075107-3075107 FN2713-S SNP T -> A AC=1;AN=200;BQB=0.961939;DP=4828;DP4=2368,2167,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.40736e-15;MQSB=0.999899;RPB=0.920993;SGB=58.1418;VDB=0.940075;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.3:3075535 chr03:003075535 0 W/3075535-3075535 FN597-S Single Base Substitution A-T INTERGENIC HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2531-S.SNP.3:3076618 chr03:003076618 0 W/3076618-3076618 FN2531-S SNP C -> T AC=2;AN=198;BQB=0.990212;DP=4486;DP4=2242,1994,28,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.43987e-34;MQSB=0.999982;RPB=0.746987;SGB=125.364;VDB=0.627638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G694E|771|LOC_Os03g06139|protein_coding|CODING|LOC_Os03g06139.1|9|1) FN2531-S.SNP.3:3076619 chr03:003076619 0 W/3076619-3076619 FN2531-S SNP C -> T AC=2;AN=198;BQB=0.985089;DP=4502;DP4=2238,2007,28,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.72974e-34;MQSB=0.99872;RPB=0.678697;SGB=125.364;VDB=0.577921;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G694R|771|LOC_Os03g06139|protein_coding|CODING|LOC_Os03g06139.1|9|1) FN1739-S.SNP.3:3087048 chr03:003087048 0 W/3087048-3087048 FN1739-S SNP A -> G AC=1;AN=188;BQB=0.627248;DP=4086;DP4=2288,1769,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.60356e-09;MQSB=0.980831;RPB=0.995617;SGB=23.5329;VDB=0.0646757;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.3:3087275 chr03:003087275 0 W/3087275-3087275 FN3725-S SNP A -> T AC=2;AN=190;BQB=0.933051;DP=3002;DP4=1225,1586,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.77739e-13;MQSB=0.932985;RPB=0.621564;SGB=46.6446;VDB=0.710822;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.3:3088662 chr03:003088662 0 W/3088662-3088662 FN692-S Single Base Substitution G-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2386.SNP.3:3090057 chr03:003090057 0 W/3090057-3090057 FN2386 SNP T -> C AC=1;AN=192;BQB=0.999998;DP=4809;DP4=2245,2281,21,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.09119e-21;MQSB=0.796598;RPB=0.610801;SGB=38.6418;VDB=0.828716;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.3:3092144 chr03:003092144 0 W/3092144-3092144 FN915-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g06160 BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2164-S.SNP.3:3094739 chr03:003094739 0 W/3094739-3094739 FN2164-S SNP G -> T AC=1;AN=168;BQB=0.0235181;DP=4388;DP4=2148,2184,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23962e-12;MQSB=0.995427;RPB=0.995176;SGB=-354.303;VDB=0.38614;EFF=INTRON(MODIFIER||||303|LOC_Os03g06160|protein_coding|CODING|LOC_Os03g06160.1|9|1) FN2781-S.SNP.3:3099465 chr03:003099465 0 W/3099465-3099465 FN2781-S SNP A -> T AC=2;AN=198;BQB=0.64185;DP=4553;DP4=1918,2310,20,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.19935e-29;MQSB=0.799037;RPB=0.259494;SGB=102.008;VDB=0.384564;EFF=INTRON(MODIFIER||||684|LOC_Os03g06180|protein_coding|CODING|LOC_Os03g06180.1|4|1) FN2781-S.SNP.3:3099467 chr03:003099467 0 W/3099467-3099467 FN2781-S SNP A -> T AC=2;AN=198;BQB=0.349014;DP=4570;DP4=1994,2277,18,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.86999e-28;MQSB=0.854363;RPB=0.376592;SGB=102.008;VDB=0.425776;EFF=INTRON(MODIFIER||||684|LOC_Os03g06180|protein_coding|CODING|LOC_Os03g06180.1|4|1) FN2781-S.SNP.3:3099469 chr03:003099469 0 W/3099469-3099469 FN2781-S SNP C -> G AC=2;AN=198;BQB=0.692241;DP=4592;DP4=2006,2275,19,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.64456e-28;MQSB=0.908554;RPB=0.577773;SGB=102.008;VDB=0.185957;EFF=INTRON(MODIFIER||||684|LOC_Os03g06180|protein_coding|CODING|LOC_Os03g06180.1|4|1) FN1439-S.SNP.3:3099838 chr03:003099838 0 W/3099838-3099838 FN1439-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g06180 expressed protein SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN1724-S.SNP.3:3109330 chr03:003109330 0 W/3109330-3109330 FN1724-S SNP C -> T AC=2;AN=188;BQB=0.433819;DP=3722;DP4=1763,1831,21,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.63777e-20;MQSB=0.99939;RPB=0.992227;SGB=-0.874095;VDB=0.632337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T573I|600|LOC_Os03g06190|protein_coding|CODING|LOC_Os03g06190.1|14|1) FN3769-S.SNP.3:3113983 chr03:003113983 0 W/3113983-3113983 FN3769-S SNP G -> A AC=2;AN=190;BQB=0.999811;DP=2810;DP4=1519,1152,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63728e-16;MQSB=0.923409;RPB=0.951936;SGB=100.07;VDB=0.748439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.3:3115235 chr03:003115235 0 W/3115235-3115235 FN2310 SNP G -> C AC=1;AN=192;BQB=0.997417;DP=4595;DP4=2241,2067,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.76081e-10;MQSB=0.0781775;RPB=0.914267;SGB=61.1661;VDB=0.463436;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G153|252|LOC_Os03g06210|protein_coding|CODING|LOC_Os03g06210.1|3|1) FN1076-S.SNP.3:3120045 chr03:003120045 0 W/3120045-3120045 FN1076-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3298-S.SNP.3:3124662 chr03:003124662 0 W/3124662-3124662 FN3298-S SNP C -> A AC=1;AN=184;BQB=0.994578;DP=3730;DP4=1689,1876,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.15451e-07;MQSB=0.999884;RPB=0.883975;SGB=28.7043;VDB=0.826644;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.3:3140966 chr03:003140966 0 W/3140966-3140966 FN682-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g06260 retrotransposon protein, putative, unclassified, expressed SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN682-S.SNP.3:3140967 chr03:003140967 0 W/3140967-3140967 FN682-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g06260 retrotransposon protein, putative, unclassified, expressed SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN1468-S.SNP.3:3142692 chr03:003142692 0 W/3142692-3142692 FN1468-S Single Base Substitution C-T INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1310-S.SNP.3:3144879 chr03:003144879 0 W/3144879-3144879 FN1310-S Single Base Substitution G-A INTRON HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN4096-S.SNP.3:3147804 chr03:003147804 0 W/3147804-3147804 FN4096-S SNP G -> A AC=1;AN=182;BQB=0.533955;DP=3579;DP4=1673,1811,11,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000558815;MQB=6.34106e-07;MQSB=0.297369;RPB=0.54811;SGB=53.182;VDB=0.681697;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.3:3148661 chr03:003148661 0 W/3148661-3148661 FN682-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g06280 transposon protein, putative, unclassified SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN490-S.SNP.3:3148820 chr03:003148820 0 W/3148820-3148820 FN490-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g06280 transposon protein, putative, unclassified SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN2536-S.SNP.3:3149300 chr03:003149300 0 W/3149300-3149300 FN2536-S SNP G -> T AC=1;AN=198;BQB=0.868105;DP=4185;DP4=2218,1767,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00215054;MQB=0.00235567;MQSB=2.13196e-06;RPB=0.807013;SGB=11.1786;VDB=0.346864;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.3:3151860 chr03:003151860 0 W/3151860-3151860 FN1660-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g06290 OsSub27 - Putative Subtilisin homologue, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN4312-S.SNP.3:3166432 chr03:003166432 0 W/3166432-3166432 FN4312-S SNP A -> G AC=1;AN=170;BQB=0.550723;DP=2721;DP4=1432,1179,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.71347e-06;MQSB=0.973248;RPB=0.976242;SGB=31.4354;VDB=0.936239;EFF=INTRON(MODIFIER||||376|LOC_Os03g06330|protein_coding|CODING|LOC_Os03g06330.1|1|1) FN1445-S.SNP.3:3169080 chr03:003169080 0 W/3169080-3169080 FN1445-S Single Base Substitution A-T INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3465-S.SNP.3:3169907 chr03:003169907 0 W/3169907-3169907 FN3465-S SNP T -> A AC=1;AN=184;BQB=0.920006;DP=2383;DP4=1127,1080,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34341e-05;MQSB=0.547669;RPB=0.533286;SGB=0.715177;VDB=0.223035;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.3:3169907 chr03:003169907 0 W/3169907-3169907 FN680-S Single Base Substitution T-A INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3823-S.SNP.3:3176140 chr03:003176140 0 W/3176140-3176140 FN3823-S SNP A -> C AC=2;AN=190;BQB=0.926696;DP=2578;DP4=1183,1317,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.87906e-14;MQSB=0.999347;RPB=0.331767;SGB=99.1879;VDB=0.657986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E462A|467|LOC_Os03g06340|protein_coding|CODING|LOC_Os03g06340.1|3|1),UTR_3_PRIME(MODIFIER||225||283|LOC_Os03g06340|protein_coding|CODING|LOC_Os03g06340.2|3|1) FN1582-S.SNP.3:3182862 chr03:003182862 0 W/3182862-3182862 FN1582-S Single Base Substitution A-T INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1299-S.SNP.3:3185424 chr03:003185424 0 W/3185424-3185424 FN1299-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g06360 late embryogenesis abundant protein D-34, putative, expressed SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN760-S.SNP.3:3195715 chr03:003195715 0 W/3195715-3195715 FN760-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2440.SNP.3:3202182 chr03:003202182 0 W/3202182-3202182 FN2440 SNP T -> A AC=1;AN=200;BQB=0.815754;DP=4696;DP4=2470,1940,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42225e-15;MQSB=0.87477;RPB=0.752061;SGB=87.1368;VDB=0.823912;EFF=INTRON(MODIFIER||||1017|LOC_Os03g06410|protein_coding|CODING|LOC_Os03g06410.1|1|1) FN1445-S.SNP.3:3203178 chr03:003203178 0 W/3203178-3203178 FN1445-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g06410 protein kinase domain containing protein, expressed SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN926-S.SNP.3:3203812 chr03:003203812 0 W/3203812-3203812 FN926-S Single Base Substitution G-A INTRON HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-87.SNP.3:3205959 chr03:003205959 0 W/3205959-3205959 FN-87 Single Base Substitution T-C INTRON HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1750-S.SNP.3:3210752 chr03:003210752 0 W/3210752-3210752 FN1750-S SNP C -> T AC=1;AN=188;BQB=0.138148;DP=3644;DP4=1797,1804,14,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.68838e-09;MQSB=0.969606;RPB=0.22514;SGB=-138.632;VDB=0.286904;EFF=UTR_3_PRIME(MODIFIER||587||186|LOC_Os03g06420|protein_coding|CODING|LOC_Os03g06420.1|3|1),UTR_3_PRIME(MODIFIER||587||186|LOC_Os03g06420|protein_coding|CODING|LOC_Os03g06420.3|2|1),UTR_3_PRIME(MODIFIER||587||186|LOC_Os03g06420|protein_coding|CODING|LOC_Os03g06420.4|1|1),UTR_3_PRIME(MODIFIER||587||186|LOC_Os03g06420|protein_coding|CODING|LOC_Os03g06420.2|3|1) FN229-S.SNP.3:3215027 chr03:003215027 0 W/3215027-3215027 FN229-S Single Base Substitution A-T INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1039-S.SNP.3:3215733 chr03:003215733 0 W/3215733-3215733 FN1039-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN831-S.SNP.3:3224958 chr03:003224958 0 W/3224958-3224958 FN831-S Single Base Substitution G-A INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN4134-S.SNP.3:3241584 chr03:003241584 0 W/3241584-3241584 FN4134-S SNP T -> C AC=2;AN=182;BQB=0.884307;DP=3034;DP4=1447,1417,26,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.01488e-26;MQSB=0.997091;RPB=0.907569;SGB=188.459;VDB=0.883063;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.3:3244872 chr03:003244872 0 W/3244872-3244872 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.0384625;DP=4202;DP4=2057,1895,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000170219;MQSB=0.715147;RPB=0.135813;SGB=40.3588;VDB=0.364597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.3:3252250 chr03:003252250 0 W/3252250-3252250 FN2120-S SNP G -> A AC=1;AN=168;BQB=0.13884;DP=2042;DP4=964,1027,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000489716;MQB=7.43094e-07;MQSB=0.988149;RPB=0.930627;SGB=4.1907;VDB=0.265201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.3:3268638 chr03:003268638 0 W/3268638-3268638 FN-105 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g06510 KIP1, putative, expressed SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN-333.SNP.3:3268638 chr03:003268638 0 W/3268638-3268638 FN-333 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g06510 KIP1, putative, expressed SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1548-S.SNP.3:3268638 chr03:003268638 0 W/3268638-3268638 FN1548-S SNP G -> T AC=1;AN=188;BQB=0.692746;DP=3886;DP4=1838,2003,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.38534e-10;MQSB=0.982343;RPB=0.909005;SGB=-10.6534;VDB=0.465066;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D2175Y|2702|LOC_Os03g06510|protein_coding|CODING|LOC_Os03g06510.1|7|1) FN2281.SNP.3:3268638 chr03:003268638 0 W/3268638-3268638 FN2281 SNP G -> T AC=2;AN=192;BQB=0.909496;DP=5028;DP4=2359,2383,20,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.84218e-27;MQSB=0.73098;RPB=0.929849;SGB=63.6713;VDB=0.306861;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D2175Y|2702|LOC_Os03g06510|protein_coding|CODING|LOC_Os03g06510.1|7|1) FN3504-S.SNP.3:3268638 chr03:003268638 0 W/3268638-3268638 FN3504-S SNP G -> T AC=1;AN=188;BQB=0.757165;DP=2868;DP4=1289,1493,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000147606;MQSB=0.928748;RPB=0.935462;SGB=39.8925;VDB=0.987785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D2175Y|2702|LOC_Os03g06510|protein_coding|CODING|LOC_Os03g06510.1|7|1) FN476-S.SNP.3:3279684 chr03:003279684 0 W/3279684-3279684 FN476-S Single Base Substitution G-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2282.SNP.3:3279699 chr03:003279699 0 W/3279699-3279699 FN2282 SNP A -> C AC=1;AN=192;BQB=0.984423;DP=4753;DP4=2244,2120,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.48603e-14;MQSB=0.891073;RPB=0.810859;SGB=131.369;VDB=0.776344;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.3:3280192 chr03:003280192 0 W/3280192-3280192 FN733-S Single Base Substitution G-T INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN-289.SNP.3:3288779 chr03:003288779 0 W/3288779-3288779 FN-289 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3505-S.SNP.3:3288787 chr03:003288787 0 W/3288787-3288787 FN3505-S SNP G -> A AC=1;AN=188;BQB=0.966163;DP=4153;DP4=1965,2121,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20533e-06;MQSB=0.836425;RPB=0.958945;SGB=25.3545;VDB=0.395899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R37W|117|LOC_Os03g06530|protein_coding|CODING|LOC_Os03g06530.1|2|1) FN475-S.SNP.3:3288896 chr03:003288896 0 W/3288896-3288896 FN475-S Single Base Substitution C-T INTRON HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1025-S.SNP.3:3301988 chr03:003301988 0 W/3301988-3301988 FN1025-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3819-S.SNP.3:3302131 chr03:003302131 0 W/3302131-3302131 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.920441;DP=2987;DP4=1311,1596,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0585872;MQB=0.231877;MQSB=0.475346;RPB=0.438779;SGB=53.6492;VDB=0.736622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1633T|2002|LOC_Os03g06560|protein_coding|CODING|LOC_Os03g06560.1|3|1) FN3982-S.SNP.3:3308960 chr03:003308960 0 W/3308960-3308960 FN3982-S SNP C -> G AC=1;AN=168;BQB=0.927663;DP=2820;DP4=1125,1530,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.52982e-09;MQSB=0.998918;RPB=0.983107;SGB=31.908;VDB=0.978627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.3:3312467 chr03:003312467 0 W/3312467-3312467 FN3496-S SNP G -> A AC=1;AN=188;BQB=0.663734;DP=2410;DP4=1056,1300,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16043e-05;MQSB=0.900472;RPB=0.863126;SGB=-2.17824;VDB=0.650903;EFF=UTR_3_PRIME(MODIFIER||137||410|LOC_Os03g06570|protein_coding|CODING|LOC_Os03g06570.1|5|1) FN1750-S.SNP.3:3314100 chr03:003314100 0 W/3314100-3314100 FN1750-S SNP C -> T AC=1;AN=188;BQB=0.102036;DP=4463;DP4=2323,2093,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.98092e-13;MQSB=0.957479;RPB=0.64309;SGB=-149.002;VDB=0.504609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.3:3315761 chr03:003315761 0 W/3315761-3315761 FN1615-S Single Base Substitution A-C INTRON HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1615-S.SNP.3:3315763 chr03:003315763 0 W/3315763-3315763 FN1615-S Single Base Substitution C-A INTRON HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3760-S.SNP.3:3319012 chr03:003319012 0 W/3319012-3319012 FN3760-S SNP G -> A AC=2;AN=190;BQB=0.987326;DP=2658;DP4=1377,1167,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.54114e-10;MQSB=0.996679;RPB=0.50239;SGB=76.4186;VDB=0.668172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.3:3324188 chr03:003324188 0 W/3324188-3324188 FN1039-S Single Base Substitution G-T INTRON HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1024-S.SNP.3:3327118 chr03:003327118 0 W/3327118-3327118 FN1024-S Single Base Substitution C-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. W466-5-1.SNP.3:3329604 chr03:003329604 0 W/3329604-3329604 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3505-S.SNP.3:3332049 chr03:003332049 0 W/3332049-3332049 FN3505-S SNP T -> C AC=1;AN=188;BQB=0.975778;DP=3047;DP4=1305,1613,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.70453e-07;MQSB=0.995901;RPB=0.997083;SGB=25.3545;VDB=0.684511;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.3:3335195 chr03:003335195 0 W/3335195-3335195 FN770-S Single Base Substitution G-A INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2387.SNP.3:3339287 chr03:003339287 0 W/3339287-3339287 FN2387 SNP G -> T AC=1;AN=192;BQB=0.632459;DP=4820;DP4=2245,2344,14,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.434e-22;MQSB=0.973272;RPB=0.997948;SGB=37.0774;VDB=0.0466317;EFF=INTRON(MODIFIER||||198|LOC_Os03g06620|protein_coding|CODING|LOC_Os03g06620.1|1|1) FN1521-S.SNP.3:3344586 chr03:003344586 0 W/3344586-3344586 FN1521-S Single Base Substitution C-T INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. W464-2-1.SNP.3:3345168 chr03:003345168 0 W/3345168-3345168 W464-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN1369-S.SNP.3:3345412 chr03:003345412 0 W/3345412-3345412 FN1369-S Single Base Substitution C-T INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3746-S.SNP.3:3346071 chr03:003346071 0 W/3346071-3346071 FN3746-S SNP C -> A AC=1;AN=190;BQB=0.836422;DP=3277;DP4=1683,1378,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44744e-07;MQSB=0.999111;RPB=0.868289;SGB=71.8647;VDB=0.0148581;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.3:3352041 chr03:003352041 0 W/3352041-3352041 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.926458;DP=2243;DP4=800,1365,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000723576;MQSB=0.269949;RPB=0.479512;SGB=25.6601;VDB=0.0327841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.3:3352594 chr03:003352594 0 W/3352594-3352594 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.0437931;DP=4719;DP4=2540,1729,23,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.73292e-16;MQSB=0.95495;RPB=0.414096;SGB=33.5675;VDB=0.466268;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.3:3355710 chr03:003355710 0 W/3355710-3355710 FN734-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1109-S.SNP.3:3369678 chr03:003369678 0 W/3369678-3369678 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN792-S.SNP.3:3374650 chr03:003374650 0 W/3374650-3374650 FN792-S Single Base Substitution G-T INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2219-S.SNP.3:3384042 chr03:003384042 0 W/3384042-3384042 FN2219-S SNP C -> T AC=1;AN=190;BQB=0.997193;DP=4781;DP4=2285,2216,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209161;MQB=1.64484e-07;MQSB=0.937365;RPB=0.848364;SGB=49.0954;VDB=0.175733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.3:3386090 chr03:003386090 0 W/3386090-3386090 FN3282-S SNP A -> T AC=1;AN=184;BQB=0.618315;DP=2755;DP4=1346,1292,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.3428e-05;MQSB=0.871719;RPB=0.695523;SGB=53.2642;VDB=0.40421;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.3:3390954 chr03:003390954 0 W/3390954-3390954 FN3912-S SNP T -> G AC=1;AN=158;BQB=0.993155;DP=2580;DP4=1179,1306,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.91785e-08;MQSB=0.716928;RPB=0.828116;SGB=34.0735;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.3:3391938 chr03:003391938 0 W/3391938-3391938 FN2091-S SNP T -> C AC=1;AN=168;BQB=0.000667058;DP=3579;DP4=1857,1678,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.186644;MQB=0.0218123;MQSB=6.40068e-37;RPB=0.326319;SGB=-200.044;VDB=0.252224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.3:3399365 chr03:003399365 0 W/3399365-3399365 FN2500 SNP C -> T AC=1;AN=200;BQB=0.644992;DP=5277;DP4=2135,2823,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.28794e-10;MQSB=0.932008;RPB=0.950079;SGB=72.6852;VDB=0.966582;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.3:3403963 chr03:003403963 0 W/3403963-3403963 FN999-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN999-S.SNP.3:3403979 chr03:003403979 0 W/3403979-3403979 FN999-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN999-S.SNP.3:3403989 chr03:003403989 0 W/3403989-3403989 FN999-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3668-S.SNP.3:3408400 chr03:003408400 0 W/3408400-3408400 FN3668-S SNP G -> T AC=2;AN=190;BQB=0.879693;DP=2639;DP4=1192,1317,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93502e-17;MQSB=0.998389;RPB=0.989408;SGB=131.065;VDB=0.414605;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R30L|823|LOC_Os03g06710|protein_coding|CODING|LOC_Os03g06710.1|2|1) FN3429-S.SNP.3:3422548 chr03:003422548 0 W/3422548-3422548 FN3429-S SNP G -> T AC=1;AN=184;BQB=0.986998;DP=2276;DP4=1101,1105,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27772e-05;MQSB=0.96453;RPB=0.430276;SGB=18.1394;VDB=0.92727;EFF=SPLICE_SITE_REGION(LOW||||858|LOC_Os03g06720|protein_coding|CODING|LOC_Os03g06720.1|15|1),INTRON(MODIFIER||||858|LOC_Os03g06720|protein_coding|CODING|LOC_Os03g06720.1|15|1) FN2301.SNP.3:3427274 chr03:003427274 0 W/3427274-3427274 FN2301 SNP G -> A AC=1;AN=192;BQB=0.931203;DP=4959;DP4=2295,2464,3,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000240704;MQSB=0.937722;RPB=0.930569;SGB=30.9536;VDB=0.387294;EFF=INTERGENIC(MODIFIER||||||||||1) FN3959-S.SNP.3:3431824 chr03:003431824 0 W/3431824-3431824 FN3959-S SNP C -> G AC=2;AN=168;BQB=0.995429;DP=2599;DP4=1306,1161,8,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.97818e-07;MQSB=0.968912;RPB=0.691567;SGB=34.748;VDB=0.139941;EFF=INTRON(MODIFIER||||555|LOC_Os03g06740|protein_coding|CODING|LOC_Os03g06740.1|10|1) FN3505-S.SNP.3:3441661 chr03:003441661 0 W/3441661-3441661 FN3505-S SNP T -> C AC=1;AN=188;BQB=0.972606;DP=2847;DP4=1470,1318,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.45603e-06;MQSB=0.960774;RPB=0.98333;SGB=28.8977;VDB=0.382943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.3:3442559 chr03:003442559 0 W/3442559-3442559 FN1748-S SNP A -> T AC=1;AN=188;BQB=0.987314;DP=3946;DP4=2009,1904,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16078e-08;MQSB=0.738136;RPB=0.96174;SGB=23.5329;VDB=0.926108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.3:3443136 chr03:003443136 0 W/3443136-3443136 FN3886-S SNP C -> A AC=1;AN=158;BQB=0.949383;DP=2397;DP4=1250,1063,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.47664e-10;MQSB=0.973956;RPB=0.792033;SGB=64.5449;VDB=0.00453739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.3:3451815 chr03:003451815 0 W/3451815-3451815 FN2276-S SNP A -> T AC=1;AN=190;BQB=0.916686;DP=4772;DP4=2208,2221,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16773e-13;MQSB=0.946878;RPB=0.169495;SGB=99.1879;VDB=0.414732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.3:3485630 chr03:003485630 0 W/3485630-3485630 FN2485 SNP A -> C AC=2;AN=200;BQB=0.875566;DP=4589;DP4=2086,2177,20,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.66608e-19;MQSB=0.999895;RPB=0.999769;SGB=78.9831;VDB=0.127127;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Ggc|C27G|728|LOC_Os03g06890|protein_coding|CODING|LOC_Os03g06890.1|1|1) FN2485.SNP.3:3485632 chr03:003485632 0 W/3485632-3485632 FN2485 SNP T -> A AC=2;AN=200;BQB=0.610869;DP=4582;DP4=2060,2159,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.10541e-18;MQSB=0.982278;RPB=0.91244;SGB=38.383;VDB=0.121225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E26V|728|LOC_Os03g06890|protein_coding|CODING|LOC_Os03g06890.1|1|1) FN4138-S.SNP.3:3490798 chr03:003490798 0 W/3490798-3490798 FN4138-S SNP G -> C AC=1;AN=170;BQB=0.996571;DP=2418;DP4=932,1419,3,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000311725;MQSB=0.879707;RPB=0.912141;SGB=21.2191;VDB=0.644914;EFF=SPLICE_SITE_REGION(LOW||||814|LOC_Os03g06900|protein_coding|CODING|LOC_Os03g06900.1|19|1),INTRON(MODIFIER||||814|LOC_Os03g06900|protein_coding|CODING|LOC_Os03g06900.1|19|1) FN3765-S.SNP.3:3492584 chr03:003492584 0 W/3492584-3492584 FN3765-S SNP T -> C AC=2;AN=190;BQB=0.931623;DP=2800;DP4=1427,1267,15,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.66141e-18;MQSB=0.998408;RPB=0.469597;SGB=144.727;VDB=0.219704;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K539|814|LOC_Os03g06900|protein_coding|CODING|LOC_Os03g06900.1|14|1) FN3848-S.SNP.3:3502562 chr03:003502562 0 W/3502562-3502562 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.997263;DP=2510;DP4=1261,1130,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08192e-06;MQSB=0.986663;RPB=0.591352;SGB=47.0672;VDB=0.923103;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q639H|648|LOC_Os03g06910|protein_coding|CODING|LOC_Os03g06910.1|1|1) FN819-S.SNP.3:3505491 chr03:003505491 0 W/3505491-3505491 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN819-S.SNP.3:3505492 chr03:003505492 0 W/3505492-3505492 FN819-S Single Base Substitution G-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. W247-2-1.SNP.3:3506851 chr03:003506851 0 W/3506851-3506851 W247-2-1 Single Base Substitution G-A INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3369-S.SNP.3:3513253 chr03:003513253 0 W/3513253-3513253 FN3369-S SNP G -> A AC=1;AN=184;BQB=0.925091;DP=1304;DP4=382,739,2,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=8.07582e-07;MQSB=2.03294e-11;RPB=0.477279;SGB=-16.2794;VDB=0.81359;EFF=INTERGENIC(MODIFIER||||||||||1) FN1713-S.SNP.3:3518366 chr03:003518366 0 W/3518366-3518366 FN1713-S SNP T -> A AC=1;AN=188;BQB=0.439365;DP=4106;DP4=2332,1735,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6105e-10;MQSB=0.999528;RPB=0.325226;SGB=-66.2726;VDB=0.00920965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.3:3521766 chr03:003521766 0 W/3521766-3521766 FN3394-S SNP A -> G AC=1;AN=184;BQB=0.879514;DP=3274;DP4=1968,1045,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90201e-07;MQSB=0.826304;RPB=0.14308;SGB=-15.7576;VDB=0.318138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.3:3523262 chr03:003523262 0 W/3523262-3523262 FN2379 SNP C -> T AC=1;AN=192;BQB=0.968722;DP=5326;DP4=2322,2571,18,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000187758;MQB=4.33717e-22;MQSB=0.517083;RPB=0.871926;SGB=0.468728;VDB=0.280261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.3:3542546 chr03:003542546 0 W/3542546-3542546 FN3950-S SNP A -> C AC=2;AN=168;BQB=0.830737;DP=1737;DP4=1056,615,13,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.52523e-09;MQSB=0.0411509;RPB=0.999724;SGB=83.1885;VDB=0.106943;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acG|T1264|1579|LOC_Os03g06950|protein_coding|CODING|LOC_Os03g06950.1|8|1) FN1067-S.SNP.3:3546013 chr03:003546013 0 W/3546013-3546013 FN1067-S Single Base Substitution C-T INTRON HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN415-S.SNP.3:3547530 chr03:003547530 0 W/3547530-3547530 FN415-S Single Base Substitution G-A INTRON HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1268-S.SNP.3:3562112 chr03:003562112 0 W/3562112-3562112 FN1268-S Single Base Substitution T-A INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2323.SNP.3:3574914 chr03:003574914 0 W/3574914-3574914 FN2323 SNP G -> A AC=1;AN=192;BQB=0.98971;DP=5009;DP4=2401,2349,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000199641;MQB=2.65359e-14;MQSB=0.0104281;RPB=0.658037;SGB=140.497;VDB=0.850377;EFF=INTRON(MODIFIER||||241|LOC_Os03g07010|protein_coding|CODING|LOC_Os03g07010.1|1|1) FN2376.SNP.3:3578178 chr03:003578178 0 W/3578178-3578178 FN2376 SNP C -> T AC=2;AN=192;BQB=0.000419162;DP=4871;DP4=2365,2134,13,11;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0.135496;MQB=0.252108;MQSB=0;RPB=0.850606;SGB=75.4235;VDB=0.256001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.3:3594468 chr03:003594468 0 W/3594468-3594468 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.149129;DP=3762;DP4=2205,1087,16,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0366826;MQB=0.00881223;MQSB=0;RPB=0.317816;SGB=-100.069;VDB=0.391834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.3:3601762 chr03:003601762 0 W/3601762-3601762 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.255251;DP=4559;DP4=1873,2453,2,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.58911e-07;MQSB=0.107222;RPB=0.488944;SGB=1.37381;VDB=0.811295;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.3:3606605 chr03:003606605 0 W/3606605-3606605 FN2474 SNP A -> T AC=1;AN=200;BQB=0.947975;DP=4928;DP4=2344,2380,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.69361e-16;MQSB=0.861569;RPB=0.819314;SGB=83.5316;VDB=0.19908;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.3:3611786 chr03:003611786 0 W/3611786-3611786 FN3887-S SNP C -> A AC=2;AN=158;BQB=0.999586;DP=2249;DP4=849,1247,25,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000444642;MQB=3.89571e-25;MQSB=0.96249;RPB=0.966651;SGB=199.022;VDB=0.980049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.3:3613641 chr03:003613641 0 W/3613641-3613641 FN2120-S SNP A -> G AC=1;AN=168;BQB=0.366367;DP=3662;DP4=1735,1892,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09242e-07;MQSB=0.998156;RPB=0.791665;SGB=-13.6493;VDB=0.509735;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.3:3619847 chr03:003619847 0 W/3619847-3619847 FN969-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g07080 endonuclease/exonuclease/phosphatase family domain containing protein, expressed SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN1366-S.SNP.3:3623580 chr03:003623580 0 W/3623580-3623580 FN1366-S Single Base Substitution G-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1409-S.SNP.3:3641551 chr03:003641551 0 W/3641551-3641551 FN1409-S Single Base Substitution T-A INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN596-S.SNP.3:3641636 chr03:003641636 0 W/3641636-3641636 FN596-S Single Base Substitution T-C INTRON HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN4030-S.SNP.3:3642537 chr03:003642537 0 W/3642537-3642537 FN4030-S SNP C -> T AC=2;AN=168;BQB=0.0832153;DP=2763;DP4=1296,1353,8,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05913e-09;MQSB=0.828148;RPB=0.964359;SGB=41.6313;VDB=0.2495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.3:3647572 chr03:003647572 0 W/3647572-3647572 FN1409-S Single Base Substitution G-A INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2600-S.SNP.3:3649499 chr03:003649499 0 W/3649499-3649499 FN2600-S SNP T -> G AC=1;AN=198;BQB=0.992979;DP=4516;DP4=2308,2039,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21781e-09;MQSB=0.68112;RPB=0.564496;SGB=63.3342;VDB=0.371752;EFF=INTRON(MODIFIER||||533|LOC_Os03g07130|protein_coding|CODING|LOC_Os03g07130.1|3|1),INTRON(MODIFIER||||533|LOC_Os03g07130|protein_coding|CODING|LOC_Os03g07130.2|3|1),INTRON(MODIFIER||||501|LOC_Os03g07130|protein_coding|CODING|LOC_Os03g07130.3|3|1),INTRON(MODIFIER||||494|LOC_Os03g07130|protein_coding|CODING|LOC_Os03g07130.4|3|1) FN926-S.SNP.3:3663140 chr03:003663140 0 W/3663140-3663140 FN926-S Single Base Substitution C-A INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN4117-S.SNP.3:3664455 chr03:003664455 0 W/3664455-3664455 FN4117-S SNP A -> T AC=2;AN=182;BQB=0.996599;DP=3022;DP4=1690,1246,13,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.09112e-12;MQSB=0.663052;RPB=0.986635;SGB=84.7091;VDB=0.687942;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.3:3670201 chr03:003670201 0 W/3670201-3670201 FN479-S Single Base Substitution C-T INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1684-S.SNP.3:3670556 chr03:003670556 0 W/3670556-3670556 FN1684-S SNP A -> T AC=1;AN=188;BQB=4.69242e-05;DP=3650;DP4=1877,1730,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.37116e-05;MQSB=0.96566;RPB=0.570743;SGB=-192.795;VDB=0.756312;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.3:3674918 chr03:003674918 0 W/3674918-3674918 FN367-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN1135-S.SNP.3:3676302 chr03:003676302 0 W/3676302-3676302 FN1135-S Single Base Substitution C-T INTRON HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN698-S.SNP.3:3683541 chr03:003683541 0 W/3683541-3683541 FN698-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g07200 expressed protein SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. W426-1-1.SNP.3:3691450 chr03:003691450 0 W/3691450-3691450 W426-1-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g07220 PPR repeat domain containing protein, putative, expressed SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1477-S.SNP.3:3696708 chr03:003696708 0 W/3696708-3696708 FN1477-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN432-S.SNP.3:3697794 chr03:003697794 0 W/3697794-3697794 FN432-S Single Base Substitution A-G INTRON HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1741-S.SNP.3:3701257 chr03:003701257 0 W/3701257-3701257 FN1741-S SNP C -> A AC=2;AN=188;BQB=0.651831;DP=2247;DP4=1116,1078,9,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.76661e-13;MQSB=0.956878;RPB=0.746043;SGB=11.7114;VDB=0.275132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K110N|515|LOC_Os03g07234|protein_coding|CODING|LOC_Os03g07234.1|1|1) FN3058-S.SNP.3:3708508 chr03:003708508 0 W/3708508-3708508 FN3058-S SNP A -> T AC=1;AN=184;BQB=0.93333;DP=3295;DP4=1136,1964,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.82788e-09;MQSB=0.545692;RPB=0.991345;SGB=93.9603;VDB=0.313443;EFF=UTR_3_PRIME(MODIFIER||481||221|LOC_Os03g07270|protein_coding|CODING|LOC_Os03g07270.1|1|1) FN1023-S.SNP.3:3713369 chr03:003713369 0 W/3713369-3713369 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2316.SNP.3:3716575 chr03:003716575 0 W/3716575-3716575 FN2316 SNP G -> A AC=1;AN=192;BQB=0.870722;DP=5121;DP4=2364,2468,18,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.57322e-17;MQSB=0.889686;RPB=0.218877;SGB=135.933;VDB=0.394472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E223K|274|LOC_Os03g07300|protein_coding|CODING|LOC_Os03g07300.1|7|1) FN1516-S.SNP.3:3721770 chr03:003721770 0 W/3721770-3721770 FN1516-S Single Base Substitution T-C INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3848-S.SNP.3:3731680 chr03:003731680 0 W/3731680-3731680 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.981667;DP=2333;DP4=1171,1091,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.5596e-05;MQSB=0.984785;RPB=0.251561;SGB=29.5899;VDB=0.102965;EFF=SPLICE_SITE_REGION(LOW||||549|LOC_Os03g07350|protein_coding|CODING|LOC_Os03g07350.1|3|1),INTRON(MODIFIER||||549|LOC_Os03g07350|protein_coding|CODING|LOC_Os03g07350.1|3|1) FN_829-2-5.SNP.3:3735438 chr03:003735438 0 W/3735438-3735438 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2177-S.SNP.3:3740819 chr03:003740819 0 W/3740819-3740819 FN2177-S SNP G -> A AC=2;AN=168;BQB=0.160608;DP=2987;DP4=1539,1387,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.29277e-16;MQSB=0.984892;RPB=0.958756;SGB=-123.754;VDB=0.897286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V274M|440|LOC_Os03g07360|protein_coding|CODING|LOC_Os03g07360.1|2|1) FN2689-S.SNP.3:3746328 chr03:003746328 0 W/3746328-3746328 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.980673;DP=4559;DP4=2060,2222,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.66809e-06;MQSB=0.996711;RPB=0.920417;SGB=35.8441;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.3:3746463 chr03:003746463 0 W/3746463-3746463 FN2755-S SNP G -> A AC=1;AN=200;BQB=0.944664;DP=5203;DP4=2480,2481,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13072e-10;MQSB=0.303344;RPB=0.966914;SGB=72.6852;VDB=0.93597;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.3:3753631 chr03:003753631 0 W/3753631-3753631 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.96753;DP=2683;DP4=1349,1266,4,11;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00111815;MQB=0.000153979;MQSB=0.924868;RPB=0.82343;SGB=61.2001;VDB=0.781198;EFF=INTRON(MODIFIER||||149|LOC_Os03g07390|protein_coding|CODING|LOC_Os03g07390.1|1|1) FN2281.SNP.3:3754345 chr03:003754345 0 W/3754345-3754345 FN2281 SNP G -> A AC=1;AN=192;BQB=0.0992614;DP=4611;DP4=2420,1784,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.26473e-13;MQSB=0.9591;RPB=0.978854;SGB=21.4339;VDB=0.195178;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R65|149|LOC_Os03g07390|protein_coding|CODING|LOC_Os03g07390.1|2|1) FN3851-S.SNP.3:3759185 chr03:003759185 0 W/3759185-3759185 FN3851-S SNP C -> A AC=1;AN=158;BQB=0.988018;DP=2679;DP4=1316,1267,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.37087e-05;MQSB=0.999345;RPB=0.716006;SGB=33.9591;VDB=0.0344509;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.3:3759408 chr03:003759408 0 W/3759408-3759408 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.999515;DP=3030;DP4=1334,1555,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.4328e-08;MQSB=0.931135;RPB=0.992612;SGB=56.7575;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.3:3763679 chr03:003763679 0 W/3763679-3763679 FN1089-S Single Base Substitution A-G INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN-346.SNP.3:3771627 chr03:003771627 0 W/3771627-3771627 FN-346 Single Base Substitution C-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2539-S.SNP.3:3784638 chr03:003784638 0 W/3784638-3784638 FN2539-S SNP A -> T AC=2;AN=198;BQB=0.426205;DP=4190;DP4=2141,1840,23,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.25834e-27;MQSB=0.964161;RPB=0.424282;SGB=58.7981;VDB=0.432977;EFF=UTR_3_PRIME(MODIFIER||288||366|LOC_Os03g07450|protein_coding|CODING|LOC_Os03g07450.1|2|1) FN3342-S.SNP.3:3788914 chr03:003788914 0 W/3788914-3788914 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.990678;DP=3422;DP4=1738,1600,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0292227;MQB=0.000294231;MQSB=0.000396904;RPB=0.988241;SGB=35.7479;VDB=0.0762501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2561-S.SNP.3:3790676 chr03:003790676 0 W/3790676-3790676 FN2561-S SNP T -> A AC=2;AN=198;BQB=0.780455;DP=4028;DP4=1901,1733,9,6;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00297915;MQB=0.000245318;MQSB=2.87417e-09;RPB=0.992156;SGB=4.56404;VDB=0.217395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.3:3791070 chr03:003791070 0 W/3791070-3791070 FN2470 SNP C -> G AC=1;AN=200;BQB=0.44835;DP=4335;DP4=2248,1848,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07824e-12;MQSB=0.996624;RPB=0.338938;SGB=86.5007;VDB=0.133344;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.3:3793284 chr03:003793284 0 W/3793284-3793284 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.790553;DP=2555;DP4=1457,1001,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.34196e-06;MQSB=0.93042;RPB=0.737871;SGB=52.1728;VDB=0.211228;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.3:3811868 chr03:003811868 0 W/3811868-3811868 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.9853;DP=2762;DP4=1229,1389,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.03021e-10;MQSB=0.998436;RPB=0.80046;SGB=83.1885;VDB=0.395713;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.3:3819347 chr03:003819347 0 W/3819347-3819347 W42-1-3S-1 Single Base Substitution C-T INTRON HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. W42-1-3S-1.SNP.3:3819350 chr03:003819350 0 W/3819350-3819350 W42-1-3S-1 Single Base Substitution G-A INTRON HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3695-S.SNP.3:3824206 chr03:003824206 0 W/3824206-3824206 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.999618;DP=2927;DP4=1317,1485,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11974e-09;MQSB=0.545996;RPB=0.980847;SGB=50.3161;VDB=0.418533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:3825176 chr03:003825176 0 W/3825176-3825176 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.906946;DP=4238;DP4=1704,2306,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.32139e-11;MQSB=0.881575;RPB=0.787016;SGB=-37.0454;VDB=0.848208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.3:3834863 chr03:003834863 0 W/3834863-3834863 FN3766-S SNP A -> G AC=2;AN=190;BQB=0.792045;DP=3231;DP4=2256,816,26,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81725e-15;MQSB=0.991995;RPB=0.3903;SGB=110.732;VDB=0.525993;EFF=UTR_5_PRIME(MODIFIER||26||431|LOC_Os03g07530|protein_coding|CODING|LOC_Os03g07530.3|1|1),UTR_5_PRIME(MODIFIER||26||431|LOC_Os03g07530|protein_coding|CODING|LOC_Os03g07530.1|2|1),UTR_5_PRIME(MODIFIER||26||431|LOC_Os03g07530|protein_coding|CODING|LOC_Os03g07530.2|2|1) FN3395-S.SNP.3:3837601 chr03:003837601 0 W/3837601-3837601 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.988779;DP=2744;DP4=1326,1330,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.99717e-07;MQSB=0.9865;RPB=0.971717;SGB=39.699;VDB=0.0688607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.3:3840402 chr03:003840402 0 W/3840402-3840402 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.0590152;DP=3006;DP4=1600,1362,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06403e-10;MQSB=0.855676;RPB=0.841445;SGB=-168.619;VDB=0.551548;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.3:3841589 chr03:003841589 0 W/3841589-3841589 FN712-S Single Base Substitution T-C INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1258-S.SNP.3:3849135 chr03:003849135 0 W/3849135-3849135 FN1258-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN-91.SNP.3:3849549 chr03:003849549 0 W/3849549-3849549 FN-91 Single Base Substitution G-A INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN-112.SNP.3:3849656 chr03:003849656 0 W/3849656-3849656 FN-112 Single Base Substitution C-T INTERGENIC HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1205-S.SNP.3:3850618 chr03:003850618 0 W/3850618-3850618 FN1205-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3434-S.SNP.3:3858284 chr03:003858284 0 W/3858284-3858284 FN3434-S SNP G -> C AC=1;AN=184;BQB=0.980733;DP=2979;DP4=1430,1458,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.84089e-10;MQSB=0.999977;RPB=0.935632;SGB=53.3568;VDB=0.892547;EFF=UTR_3_PRIME(MODIFIER||317||486|LOC_Os03g07570|protein_coding|CODING|LOC_Os03g07570.1|9|1),UTR_3_PRIME(MODIFIER||317||306|LOC_Os03g07570|protein_coding|CODING|LOC_Os03g07570.3|7|1),UTR_3_PRIME(MODIFIER||317||486|LOC_Os03g07570|protein_coding|CODING|LOC_Os03g07570.4|10|1) FN3970-S.SNP.3:3862206 chr03:003862206 0 W/3862206-3862206 FN3970-S SNP T -> C AC=2;AN=168;BQB=0.605884;DP=2665;DP4=1140,1353,17,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.70661e-17;MQSB=0.949838;RPB=0.0208219;SGB=158.512;VDB=0.17594;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I788|1005|LOC_Os03g07580|protein_coding|CODING|LOC_Os03g07580.1|2|1) FN-272.SNP.3:3868971 chr03:003868971 0 W/3868971-3868971 FN-272 Single Base Substitution A-G INTRON HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN447-S.SNP.3:3875500 chr03:003875500 0 W/3875500-3875500 FN447-S Single Base Substitution A-T INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN631-S.SNP.3:3885580 chr03:003885580 0 W/3885580-3885580 FN631-S Single Base Substitution G-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-195.SNP.3:3887473 chr03:003887473 0 W/3887473-3887473 FN-195 Single Base Substitution A-C INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. W423-5-1.SNP.3:3891839 chr03:003891839 0 W/3891839-3891839 W423-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2706-S.SNP.3:3894122 chr03:003894122 0 W/3894122-3894122 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.979653;DP=3417;DP4=1572,1596,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000292654;MQB=7.34834e-08;MQSB=0.067333;RPB=0.812169;SGB=24.2746;VDB=0.560746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.3:3898669 chr03:003898669 0 W/3898669-3898669 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.998961;DP=2251;DP4=1337,838,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54494e-07;MQSB=0.99024;RPB=0.995354;SGB=39.2697;VDB=0.694999;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.3:3903367 chr03:003903367 0 W/3903367-3903367 FN1320-S Single Base Substitution G-T INTRON HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN-202.SNP.3:3908433 chr03:003908433 0 W/3908433-3908433 FN-202 Single Base Substitution G-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN860-S.SNP.3:3909490 chr03:003909490 0 W/3909490-3909490 FN860-S Single Base Substitution G-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2130-S.SNP.3:3911601 chr03:003911601 0 W/3911601-3911601 FN2130-S SNP A -> T AC=1;AN=168;BQB=0.00573928;DP=3231;DP4=1176,2024,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000223353;MQSB=0.720257;RPB=0.60861;SGB=-17.5266;VDB=0.621197;EFF=INTERGENIC(MODIFIER||||||||||1) FN-313.SNP.3:3913794 chr03:003913794 0 W/3913794-3913794 FN-313 Single Base Substitution G-A INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN471-S.SNP.3:3927228 chr03:003927228 0 W/3927228-3927228 FN471-S Single Base Substitution C-A INTERGENIC HOMO SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2758-S.SNP.3:3929172 chr03:003929172 0 W/3929172-3929172 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.92781;DP=5119;DP4=2400,2300,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.54868e-10;MQSB=0.846254;RPB=0.177114;SGB=65.5058;VDB=0.774812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.3:3938180 chr03:003938180 0 W/3938180-3938180 FN1402-S Single Base Substitution T-C INTRON HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2645-S.SNP.3:3942869 chr03:003942869 0 W/3942869-3942869 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.747041;DP=4576;DP4=2293,2083,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15645e-07;MQSB=0.822667;RPB=0.974723;SGB=51.0851;VDB=0.544331;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T32|176|LOC_Os03g07760|protein_coding|CODING|LOC_Os03g07760.1|1|1) FN770-S.SNP.3:3952952 chr03:003952952 0 W/3952952-3952952 FN770-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g07780 transposon protein, putative, unclassified, expressed SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1344-S.SNP.3:3953204 chr03:003953204 0 W/3953204-3953204 FN1344-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g07780 transposon protein, putative, unclassified, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2646-S.SNP.3:3955333 chr03:003955333 0 W/3955333-3955333 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.963908;DP=6303;DP4=3562,2379,11,15;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0536253;MQB=0.123287;MQSB=0;RPB=0.0995939;SGB=83.5316;VDB=0.711208;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.3:3955334 chr03:003955334 0 W/3955334-3955334 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.644087;DP=6288;DP4=3483,2379,12,15;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0540712;MQB=0.124297;MQSB=0;RPB=0.0987279;SGB=55.5366;VDB=0.711865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.3:3969459 chr03:003969459 0 W/3969459-3969459 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.0395;DP=4024;DP4=2013,1747,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01903e-08;MQSB=0.764239;RPB=0.972917;SGB=65.5058;VDB=0.473828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.3:3971773 chr03:003971773 0 W/3971773-3971773 FN2309 SNP G -> T AC=1;AN=192;BQB=0.65356;DP=5211;DP4=2601,2329,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000191902;MQB=4.33832e-16;MQSB=0.376837;RPB=0.911671;SGB=59.6861;VDB=0.11602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A185S|416|LOC_Os03g07800|protein_coding|CODING|LOC_Os03g07800.1|2|1) FN1463-S.SNP.3:3978204 chr03:003978204 0 W/3978204-3978204 FN1463-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3817-S.SNP.3:3995173 chr03:003995173 0 W/3995173-3995173 FN3817-S SNP C -> T AC=1;AN=190;BQB=0.96237;DP=3121;DP4=1619,1434,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19675e-06;MQSB=0.972864;RPB=0.982195;SGB=21.8853;VDB=0.429958;EFF=INTRON(MODIFIER||||488|LOC_Os03g07850|protein_coding|CODING|LOC_Os03g07850.1|9|1) FN2235-S.SNP.3:3997072 chr03:003997072 0 W/3997072-3997072 FN2235-S SNP G -> T AC=1;AN=190;BQB=0.933267;DP=4895;DP4=2210,2413,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020429;MQB=2.05645e-07;MQSB=0.894685;RPB=0.687996;SGB=50.3161;VDB=0.73794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q422H|488|LOC_Os03g07850|protein_coding|CODING|LOC_Os03g07850.1|10|1) FN_N1-151-7.SNP.3:4002085 chr03:004002085 0 W/4002085-4002085 FN_N1-151-7 Single Base Substitution C-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2134-S.SNP.3:4013057 chr03:004013057 0 W/4013057-4013057 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.399355;DP=3912;DP4=2497,1349,21,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.15659e-14;MQSB=0.992322;RPB=0.51343;SGB=27.0838;VDB=0.128639;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.3:4015351 chr03:004015351 0 W/4015351-4015351 FN3918-S SNP G -> A AC=2;AN=158;BQB=0.683118;DP=2831;DP4=1479,1237,14,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.54663e-11;MQSB=0.819725;RPB=0.996738;SGB=112.609;VDB=0.120185;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W220*|435|LOC_Os03g07890|protein_coding|CODING|LOC_Os03g07890.1|1|1);LOF=(LOC_Os03g07890|LOC_Os03g07890|1|1.00);NMD=(LOC_Os03g07890|LOC_Os03g07890|1|1.00) FN506-S.SNP.3:4016991 chr03:004016991 0 W/4016991-4016991 FN506-S Single Base Substitution G-A INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN-370.SNP.3:4018885 chr03:004018885 0 W/4018885-4018885 FN-370 Single Base Substitution G-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.3:4018886 chr03:004018886 0 W/4018886-4018886 FN-370 Single Base Substitution T-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-196.SNP.3:4019303 chr03:004019303 0 W/4019303-4019303 FN-196 Single Base Substitution G-A INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN4272-S.SNP.3:4022225 chr03:004022225 0 W/4022225-4022225 FN4272-S SNP G -> T AC=1;AN=170;BQB=0.853488;DP=2294;DP4=919,1304,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.40296e-08;MQSB=0.905345;RPB=0.0928053;SGB=52.3148;VDB=0.342345;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.3:4022229 chr03:004022229 0 W/4022229-4022229 FN4272-S SNP T -> A AC=1;AN=170;BQB=0.972111;DP=2279;DP4=893,1235,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00776e-09;MQSB=0.895377;RPB=0.0469286;SGB=22.3266;VDB=0.156173;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.3:4030001 chr03:004030001 0 W/4030001-4030001 FN4046-S SNP A -> C AC=2;AN=168;BQB=0.988075;DP=2638;DP4=1406,1120,18,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.21573e-14;MQSB=0.767072;RPB=0.0794627;SGB=109.773;VDB=0.188871;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.3:4031023 chr03:004031023 0 W/4031023-4031023 FN543-S Single Base Substitution C-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2630-S.SNP.3:4031270 chr03:004031270 0 W/4031270-4031270 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.895543;DP=4812;DP4=2364,2183,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.7933e-09;MQSB=0.977502;RPB=0.135792;SGB=34.6953;VDB=0.0417571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.3:4034420 chr03:004034420 0 W/4034420-4034420 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.0738339;DP=4195;DP4=2018,2135,17,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.01805e-07;MQSB=0.845904;RPB=0.889165;SGB=-115.779;VDB=0.659092;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.3:4034753 chr03:004034753 0 W/4034753-4034753 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1577-S.SNP.3:4040670 chr03:004040670 0 W/4040670-4040670 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN742-S.SNP.3:4066363 chr03:004066363 0 W/4066363-4066363 FN742-S Single Base Substitution C-T STOP_GAINED HET LOC_Os03g07950 expressed protein SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2196-S.SNP.3:4068329 chr03:004068329 0 W/4068329-4068329 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.169865;DP=4780;DP4=2024,2401,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209205;MQB=2.02461e-07;MQSB=0.325986;RPB=0.27643;SGB=5.66499;VDB=0.800896;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.3:4078694 chr03:004078694 0 W/4078694-4078694 FN1410-S Single Base Substitution G-A INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN3537-S.SNP.3:4079253 chr03:004079253 0 W/4079253-4079253 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.522508;DP=2849;DP4=1274,1508,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.06597e-08;MQSB=0.92057;RPB=0.256542;SGB=20.9896;VDB=0.462635;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.3:4084029 chr03:004084029 0 W/4084029-4084029 W472-5-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g07990 acetyltransferase, GNAT family, putative, expressed SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2351.SNP.3:4084513 chr03:004084513 0 W/4084513-4084513 FN2351 SNP A -> T AC=1;AN=192;BQB=0.822433;DP=5344;DP4=2526,2474,17,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.52658e-11;MQSB=0.844698;RPB=0.578025;SGB=-7.9965;VDB=0.258717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D272V|306|LOC_Os03g07990|protein_coding|CODING|LOC_Os03g07990.1|8|1) FN1701-S.SNP.3:4086272 chr03:004086272 0 W/4086272-4086272 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.00246571;DP=3810;DP4=1804,1966,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28514e-08;MQSB=0.4477;RPB=0.963792;SGB=-101.181;VDB=0.965938;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.3:4091165 chr03:004091165 0 W/4091165-4091165 FN4101-S SNP A -> C AC=1;AN=182;BQB=0.984914;DP=3180;DP4=1340,1727,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.06453e-06;MQSB=0.975198;RPB=0.96845;SGB=44.1115;VDB=0.804222;EFF=INTRON(MODIFIER||||378|LOC_Os03g08000|protein_coding|CODING|LOC_Os03g08000.1|1|1) FN3377-S.SNP.3:4100666 chr03:004100666 0 W/4100666-4100666 FN3377-S SNP T -> C AC=1;AN=184;BQB=0.981902;DP=2929;DP4=1418,1385,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.96946e-06;MQSB=0.486572;RPB=0.919477;SGB=28.7043;VDB=0.49956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.3:4110149 chr03:004110149 0 W/4110149-4110149 FN2530-S SNP A -> C AC=1;AN=198;BQB=0.611394;DP=4141;DP4=2166,1735,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.57635e-09;MQSB=0.336466;RPB=0.386666;SGB=29.3443;VDB=0.262714;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.3:4111049 chr03:004111049 0 W/4111049-4111049 FN-218 Single Base Substitution C-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3445-S.SNP.3:4113651 chr03:004113651 0 W/4113651-4113651 FN3445-S SNP A -> T AC=2;AN=184;BQB=0.987236;DP=2764;DP4=1299,1395,4,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.53859e-06;MQSB=0.909699;RPB=0.0803729;SGB=39.699;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.3:4118953 chr03:004118953 0 W/4118953-4118953 FN1684-S SNP G -> A AC=1;AN=188;BQB=0.255608;DP=2311;DP4=1040,1218,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.16149e-06;MQSB=0.942276;RPB=0.449588;SGB=-36.4511;VDB=0.195169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.3:4126018 chr03:004126018 0 W/4126018-4126018 FN2120-S SNP A -> T AC=1;AN=168;BQB=0.123442;DP=3203;DP4=1329,1824,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000334622;MQSB=0.888586;RPB=0.848913;SGB=-132.066;VDB=0.746704;EFF=INTRON(MODIFIER||||612|LOC_Os03g08070|protein_coding|CODING|LOC_Os03g08070.3|2|1),INTRON(MODIFIER||||885|LOC_Os03g08070|protein_coding|CODING|LOC_Os03g08070.1|2|1),INTRON(MODIFIER||||802|LOC_Os03g08070|protein_coding|CODING|LOC_Os03g08070.2|2|1) FN2630-S.SNP.3:4137504 chr03:004137504 0 W/4137504-4137504 FN2630-S SNP T -> C AC=1;AN=200;BQB=0.294357;DP=4671;DP4=2322,2093,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25932e-10;MQSB=0.99848;RPB=0.642031;SGB=-38.0794;VDB=0.828794;EFF=INTRON(MODIFIER||||330|LOC_Os03g08110|protein_coding|CODING|LOC_Os03g08110.1|3|1) FN2533-S.SNP.3:4138620 chr03:004138620 0 W/4138620-4138620 FN2533-S SNP A -> T AC=1;AN=198;BQB=0.953742;DP=4439;DP4=1991,2103,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.00611e-09;MQSB=0.185843;RPB=0.931974;SGB=63.3342;VDB=0.0468014;EFF=INTRON(MODIFIER||||330|LOC_Os03g08110|protein_coding|CODING|LOC_Os03g08110.1|1|1) FN-167.SNP.3:4141180 chr03:004141180 0 W/4141180-4141180 FN-167 Single Base Substitution T-A INTRON HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-167.SNP.3:4141181 chr03:004141181 0 W/4141181-4141181 FN-167 Single Base Substitution T-A INTRON HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-167.SNP.3:4141293 chr03:004141293 0 W/4141293-4141293 FN-167 Single Base Substitution A-G INTRON HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2139-S.SNP.3:4150496 chr03:004150496 0 W/4150496-4150496 FN2139-S SNP G -> C AC=1;AN=168;BQB=0.095727;DP=2588;DP4=933,1541,8,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.72276e-06;MQSB=0.303475;RPB=0.999075;SGB=-194.475;VDB=0.0740306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.3:4160217 chr03:004160217 0 W/4160217-4160217 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2352.SNP.3:4161254 chr03:004161254 0 W/4161254-4161254 FN2352 SNP G -> T AC=1;AN=192;BQB=0.724055;DP=4434;DP4=1768,2241,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.23207;MQB=0.697634;MQSB=0;RPB=0.78417;SGB=36.607;VDB=0.131014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.3:4161295 chr03:004161295 0 W/4161295-4161295 FN1492-S Single Base Substitution G-A INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2597-S.SNP.3:4163767 chr03:004163767 0 W/4163767-4163767 FN2597-S SNP T -> G AC=1;AN=198;BQB=0.69349;DP=4509;DP4=2227,2078,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.7585e-11;MQSB=0.999995;RPB=0.651751;SGB=58.1246;VDB=0.0770096;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.3:4168990 chr03:004168990 0 W/4168990-4168990 FN244-S Single Base Substitution C-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3421-S.SNP.3:4177373 chr03:004177373 0 W/4177373-4177373 FN3421-S SNP T -> C AC=1;AN=184;BQB=0.819527;DP=2957;DP4=1418,1424,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42218e-05;MQSB=0.974066;RPB=0.770506;SGB=25.1826;VDB=0.258129;EFF=INTRON(MODIFIER||||425|LOC_Os03g08170|protein_coding|CODING|LOC_Os03g08170.1|3|1) FN3715-S.SNP.3:4184679 chr03:004184679 0 W/4184679-4184679 FN3715-S SNP T -> A AC=1;AN=190;BQB=0.959162;DP=3009;DP4=1242,1681,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.48239e-09;MQSB=0.982897;RPB=0.991777;SGB=5.66499;VDB=0.0735894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.3:4186401 chr03:004186401 0 W/4186401-4186401 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.935818;DP=4787;DP4=2356,2173,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208899;MQB=7.1704e-08;MQSB=0.979481;RPB=0.328017;SGB=33.0593;VDB=0.398191;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.3:4194344 chr03:004194344 0 W/4194344-4194344 FN3312-S SNP T -> A AC=1;AN=184;BQB=0.561444;DP=2963;DP4=1456,1405,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13043e-07;MQSB=0.971769;RPB=0.919518;SGB=3.75875;VDB=0.236831;EFF=UTR_3_PRIME(MODIFIER||46||639|LOC_Os03g08230|protein_coding|CODING|LOC_Os03g08230.1|1|1) FN2711-S.SNP.3:4201764 chr03:004201764 0 W/4201764-4201764 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.00856635;DP=4841;DP4=2483,2086,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69176e-13;MQSB=0.913248;RPB=0.0106154;SGB=79.9264;VDB=0.12056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.3:4204309 chr03:004204309 0 W/4204309-4204309 FN1039-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN-13.SNP.3:4216246 chr03:004216246 0 W/4216246-4216246 FN-13 Single Base Substitution T-C INTERGENIC HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.3:4216246 chr03:004216246 0 W/4216246-4216246 FN-13 Single Base Substitution T-C INTERGENIC Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN2415.SNP.3:4217108 chr03:004217108 0 W/4217108-4217108 FN2415 SNP C -> T AC=2;AN=200;BQB=0.670171;DP=5224;DP4=2224,2496,24,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.43886e-28;MQSB=0.422106;RPB=0.973559;SGB=62.4605;VDB=0.0560226;EFF=UTR_3_PRIME(MODIFIER||1104||91|LOC_Os03g08284|protein_coding|CODING|LOC_Os03g08284.3|5|1),UTR_3_PRIME(MODIFIER||1597||82|LOC_Os03g08284|protein_coding|CODING|LOC_Os03g08284.1|4|1),UTR_3_PRIME(MODIFIER||1597||82|LOC_Os03g08284|protein_coding|CODING|LOC_Os03g08284.2|4|1) FN1423-S.SNP.3:4232690 chr03:004232690 0 W/4232690-4232690 FN1423-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os03g08310 ZIM domain containing protein, putative, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2107-S.SNP.3:4236208 chr03:004236208 0 W/4236208-4236208 FN2107-S SNP T -> C AC=1;AN=168;BQB=0.0138092;DP=3236;DP4=1317,1876,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.7221e-08;MQSB=0.842033;RPB=0.971665;SGB=-12.3568;VDB=0.729111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.3:4236763 chr03:004236763 0 W/4236763-4236763 FN1464-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2546-S.SNP.3:4245466 chr03:004245466 0 W/4245466-4245466 FN2546-S SNP G -> T AC=2;AN=198;BQB=0.99813;DP=3443;DP4=1502,1678,15,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.36095e-13;MQSB=0.915776;RPB=0.773443;SGB=79.6954;VDB=0.584607;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.3:4245486 chr03:004245486 0 W/4245486-4245486 FN3866-S SNP G -> A AC=1;AN=158;BQB=0.892783;DP=2298;DP4=1035,1169,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.63678e-05;MQSB=0.993439;RPB=0.963221;SGB=34.0735;VDB=0.605821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.3:4253197 chr03:004253197 0 W/4253197-4253197 FN-350 Single Base Substitution C-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1470-S.SNP.3:4255670 chr03:004255670 0 W/4255670-4255670 FN1470-S Single Base Substitution C-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN-14.SNP.3:4260960 chr03:004260960 0 W/4260960-4260960 FN-14 Single Base Substitution C-T UTR_5_PRIME Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3765-S.SNP.3:4261325 chr03:004261325 0 W/4261325-4261325 FN3765-S SNP G -> A AC=2;AN=190;BQB=0.886081;DP=3084;DP4=1545,1418,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.77645e-27;MQSB=0.820849;RPB=0.955723;SGB=190.265;VDB=0.649953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V32M|421|LOC_Os03g08350|protein_coding|CODING|LOC_Os03g08350.1|1|1) FN3765-S.SNP.3:4261331 chr03:004261331 0 W/4261331-4261331 FN3765-S SNP G -> A AC=2;AN=190;BQB=0.638342;DP=3038;DP4=1531,1381,23,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.55505e-27;MQSB=0.991631;RPB=0.643936;SGB=194.819;VDB=0.715688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A34T|421|LOC_Os03g08350|protein_coding|CODING|LOC_Os03g08350.1|1|1) FN3765-S.SNP.3:4261332 chr03:004261332 0 W/4261332-4261332 FN3765-S SNP C -> A AC=2;AN=190;BQB=0.994472;DP=3029;DP4=1540,1364,21,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.88823e-25;MQSB=0.997692;RPB=0.327133;SGB=172.05;VDB=0.58668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A34D|421|LOC_Os03g08350|protein_coding|CODING|LOC_Os03g08350.1|1|1) FN1369-S.SNP.3:4264734 chr03:004264734 0 W/4264734-4264734 FN1369-S Single Base Substitution T-C INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN-164.SNP.3:4269098 chr03:004269098 0 W/4269098-4269098 FN-164 Single Base Substitution C-T INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN3942-S.SNP.3:4303137 chr03:004303137 0 W/4303137-4303137 FN3942-S SNP C -> T AC=1;AN=168;BQB=0.951934;DP=2695;DP4=1324,1143,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00319e-06;MQSB=0.100547;RPB=0.989558;SGB=48.4712;VDB=0.603272;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.3:4305435 chr03:004305435 0 W/4305435-4305435 FN734-S Single Base Substitution T-C INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1001-S.SNP.3:4314451 chr03:004314451 0 W/4314451-4314451 FN1001-S Single Base Substitution T-A INTERGENIC HOMO SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2209-S.SNP.3:4316404 chr03:004316404 0 W/4316404-4316404 FN2209-S SNP T -> A AC=1;AN=190;BQB=0.797152;DP=4595;DP4=2385,1842,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08767e-06;MQSB=0.942207;RPB=0.927445;SGB=13.4442;VDB=0.927044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.3:4321040 chr03:004321040 0 W/4321040-4321040 FN3730-S SNP G -> A AC=1;AN=190;BQB=0.959323;DP=2121;DP4=892,1171,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000270919;MQSB=0.889831;RPB=0.852553;SGB=30.8803;VDB=0.995745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E203K|261|LOC_Os03g08420|protein_coding|CODING|LOC_Os03g08420.1|2|1) FN-269.SNP.3:4338889 chr03:004338889 0 W/4338889-4338889 FN-269 Single Base Substitution G-A UTR_5_PRIME HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-227.SNP.3:4341857 chr03:004341857 0 W/4341857-4341857 FN-227 Single Base Substitution A-C INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN939-S.SNP.3:4347645 chr03:004347645 0 W/4347645-4347645 FN939-S Single Base Substitution T-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN803-S.SNP.3:4350720 chr03:004350720 0 W/4350720-4350720 FN803-S Single Base Substitution C-T INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN4149-S.SNP.3:4353049 chr03:004353049 0 W/4353049-4353049 FN4149-S SNP A -> G AC=2;AN=170;BQB=0.979209;DP=2320;DP4=1181,1075,9,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.9041e-10;MQSB=0.997443;RPB=0.984043;SGB=65.6427;VDB=0.82346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.3:4353086 chr03:004353086 0 W/4353086-4353086 FN1061-S Single Base Substitution A-T INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3916-S.SNP.3:4360133 chr03:004360133 0 W/4360133-4360133 FN3916-S SNP T -> A AC=1;AN=158;BQB=0.758368;DP=2312;DP4=1258,984,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.19559e-08;MQSB=0.997661;RPB=0.342329;SGB=51.4366;VDB=0.559918;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K175*|375|LOC_Os03g08480|protein_coding|CODING|LOC_Os03g08480.2|2|1),STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K175*|375|LOC_Os03g08480|protein_coding|CODING|LOC_Os03g08480.1|2|1) FN1577-S.SNP.3:4362567 chr03:004362567 0 W/4362567-4362567 FN1577-S Single Base Substitution G-A INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN999-S.SNP.3:4362788 chr03:004362788 0 W/4362788-4362788 FN999-S Single Base Substitution G-A INTRON HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2242-S.SNP.3:4376708 chr03:004376708 0 W/4376708-4376708 FN2242-S SNP T -> C AC=1;AN=190;BQB=0.488595;DP=5140;DP4=2669,2110,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000389105;MQB=3.48324e-07;MQSB=0.35552;RPB=0.862872;SGB=53.6492;VDB=0.965716;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.3:4379581 chr03:004379581 0 W/4379581-4379581 FN1519-S Single Base Substitution A-T INTERGENIC Homo SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3675-S.SNP.3:4380315 chr03:004380315 0 W/4380315-4380315 FN3675-S SNP T -> C AC=1;AN=190;BQB=0.986167;DP=2955;DP4=1489,1268,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.90171e-08;MQSB=0.914507;RPB=0.478265;SGB=5.66499;VDB=0.45851;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M101V|163|LOC_Os03g08520|protein_coding|CODING|LOC_Os03g08520.1|1|1) FN3525-S.SNP.3:4381615 chr03:004381615 0 W/4381615-4381615 FN3525-S SNP G -> T AC=1;AN=188;BQB=0.876977;DP=2481;DP4=1174,1220,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.05151e-07;MQSB=0.926641;RPB=0.894682;SGB=32.441;VDB=0.761804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.3:4414084 chr03:004414084 0 W/4414084-4414084 FN-126 Single Base Substitution T-C INTRON HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2274-S.SNP.3:4417197 chr03:004417197 0 W/4417197-4417197 FN2274-S SNP T -> C AC=2;AN=190;BQB=0.860455;DP=4994;DP4=2055,2545,27,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78403e-30;MQSB=0.719353;RPB=0.542001;SGB=133.476;VDB=0.359571;EFF=SPLICE_SITE_DONOR(HIGH||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.1|2|1),SPLICE_SITE_DONOR(HIGH||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.2|2|1),SPLICE_SITE_DONOR(HIGH||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.3|1|1),INTRON(MODIFIER||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.1|2|1),INTRON(MODIFIER||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.2|2|1),INTRON(MODIFIER||||212|LOC_Os03g08580|protein_coding|CODING|LOC_Os03g08580.3|1|1);LOF=(LOC_Os03g08580|LOC_Os03g08580|3|1.00) FN1200-S.SNP.3:4430011 chr03:004430011 0 W/4430011-4430011 FN1200-S Single Base Substitution T-C INTRON HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-170.SNP.3:4430620 chr03:004430620 0 W/4430620-4430620 FN-170 Single Base Substitution A-G INTRON HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1396-S.SNP.3:4438084 chr03:004438084 0 W/4438084-4438084 FN1396-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1504-S.SNP.3:4450809 chr03:004450809 0 W/4450809-4450809 FN1504-S Single Base Substitution G-A INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1504-S.SNP.3:4450811 chr03:004450811 0 W/4450811-4450811 FN1504-S Single Base Substitution A-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN420-S.SNP.3:4464685 chr03:004464685 0 W/4464685-4464685 FN420-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g08660 serine acetyltransferase protein, putative, expressed SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN-199.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN-199 Single Base Substitution C-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-246.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3486-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN3486-S SNP C -> T AC=2;AN=184;BQB=0.373986;DP=2946;DP4=1587,1265,17,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.22624e-17;MQSB=0.997989;RPB=0.842724;SGB=116.749;VDB=0.919577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN3867-S SNP C -> T AC=2;AN=158;BQB=0.999458;DP=2359;DP4=1135,1121,16,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.79214e-15;MQSB=0.782587;RPB=0.154465;SGB=77.8763;VDB=0.0340014;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN426-S Single Base Substitution C-T INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN517-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN517-S Single Base Substitution C-T INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN542-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN542-S Single Base Substitution C-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN568-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN568-S Single Base Substitution C-T INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN704-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN704-S Single Base Substitution C-T INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN915-S.SNP.3:4467224 chr03:004467224 0 W/4467224-4467224 FN915-S Single Base Substitution C-T INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3431-S.SNP.3:4473930 chr03:004473930 0 W/4473930-4473930 FN3431-S SNP A -> T AC=1;AN=184;BQB=0.872208;DP=2699;DP4=1267,1363,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000883096;MQSB=0.988851;RPB=0.568516;SGB=26.1347;VDB=0.157598;EFF=INTRON(MODIFIER||||573|LOC_Os03g08680|protein_coding|CODING|LOC_Os03g08680.1|1|1),INTRON(MODIFIER||||571|LOC_Os03g08680|protein_coding|CODING|LOC_Os03g08680.2|1|1) FN700-S.SNP.3:4478410 chr03:004478410 0 W/4478410-4478410 FN700-S Single Base Substitution T-C INTERGENIC HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN2323.SNP.3:4481609 chr03:004481609 0 W/4481609-4481609 FN2323 SNP C -> T AC=1;AN=192;BQB=0.900838;DP=4969;DP4=2546,2194,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01159e-08;MQSB=0.993838;RPB=0.698617;SGB=58.3392;VDB=0.652204;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.3:4487290 chr03:004487290 0 W/4487290-4487290 FN561-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g08700 expressed protein SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN-115.SNP.3:4487613 chr03:004487613 0 W/4487613-4487613 FN-115 Single Base Substitution T-C INTRON HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3517-S.SNP.3:4495737 chr03:004495737 0 W/4495737-4495737 FN3517-S SNP T -> A AC=1;AN=188;BQB=0.987002;DP=2871;DP4=1385,1257,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65752e-08;MQSB=0.994012;RPB=0.96102;SGB=53.5223;VDB=0.727166;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.3:4499841 chr03:004499841 0 W/4499841-4499841 FN4001-S SNP A -> T AC=2;AN=168;BQB=0.766782;DP=2649;DP4=1262,1247,16,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.60832e-12;MQSB=0.839569;RPB=0.781462;SGB=69.0561;VDB=0.260209;EFF=INTRON(MODIFIER||||302|LOC_Os03g08730|protein_coding|CODING|LOC_Os03g08730.1|7|1) FN1097-S.SNP.3:4499889 chr03:004499889 0 W/4499889-4499889 FN1097-S Single Base Substitution C-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2107-S.SNP.3:4508616 chr03:004508616 0 W/4508616-4508616 FN2107-S SNP A -> G AC=1;AN=168;BQB=0.785817;DP=3646;DP4=1996,1609,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.73558e-09;MQSB=0.963667;RPB=0.07007;SGB=-69.6373;VDB=0.546721;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.3:4512859 chr03:004512859 0 W/4512859-4512859 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN_776-5-1.SNP.3:4515737 chr03:004515737 0 W/4515737-4515737 FN_776-5-1 Single Base Substitution G-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN1176-S.SNP.3:4532601 chr03:004532601 0 W/4532601-4532601 FN1176-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2705-S.SNP.3:4545567 chr03:004545567 0 W/4545567-4545567 FN2705-S SNP G -> A AC=2;AN=200;BQB=0.203731;DP=4620;DP4=2073,2287,11,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.35757e-13;MQSB=0.00372773;RPB=0.549792;SGB=123.342;VDB=0.77654;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E69|232|LOC_Os03g08810|protein_coding|CODING|LOC_Os03g08810.1|1|1) FN1709-S.SNP.3:4549721 chr03:004549721 0 W/4549721-4549721 FN1709-S SNP A -> G AC=1;AN=188;BQB=0.112774;DP=3312;DP4=2044,1238,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38303e-07;MQSB=0.664667;RPB=0.667414;SGB=-14.4565;VDB=0.959638;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.3:4551699 chr03:004551699 0 W/4551699-4551699 FN731-S Single Base Substitution G-A INTRON HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN4174-S.SNP.3:4557780 chr03:004557780 0 W/4557780-4557780 FN4174-S SNP A -> G AC=1;AN=170;BQB=0.413889;DP=2498;DP4=1171,1260,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.00608e-06;MQSB=0.975162;RPB=0.677776;SGB=38.3207;VDB=0.291443;EFF=SPLICE_SITE_REGION(LOW||||1178|LOC_Os03g08820|protein_coding|CODING|LOC_Os03g08820.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S1081|1178|LOC_Os03g08820|protein_coding|CODING|LOC_Os03g08820.1|8|1) FN2421.SNP.3:4568876 chr03:004568876 0 W/4568876-4568876 FN2421 SNP A -> T AC=2;AN=200;BQB=0.624558;DP=4916;DP4=2179,2348,25,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.59909e-25;MQSB=0.9631;RPB=0.577499;SGB=192.42;VDB=0.189515;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.3:4570979 chr03:004570979 0 W/4570979-4570979 FN464-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN736-S.SNP.3:4572742 chr03:004572742 0 W/4572742-4572742 FN736-S Single Base Substitution G-A INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN1414-S.SNP.3:4572931 chr03:004572931 0 W/4572931-4572931 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2386.SNP.3:4574153 chr03:004574153 0 W/4574153-4574153 FN2386 SNP A -> G AC=1;AN=192;BQB=0.997006;DP=5313;DP4=2470,2294,14,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000188218;MQB=3.02544e-15;MQSB=0.946872;RPB=0.998965;SGB=-44.0408;VDB=0.312457;EFF=INTRON(MODIFIER||||200|LOC_Os03g08840|protein_coding|CODING|LOC_Os03g08840.1|1|1) FN3851-S.SNP.3:4577625 chr03:004577625 0 W/4577625-4577625 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.977842;DP=2428;DP4=1181,1170,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.49578e-11;MQSB=0.998904;RPB=0.997739;SGB=50.9207;VDB=0.455117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.3:4588688 chr03:004588688 0 W/4588688-4588688 FN1118-S Single Base Substitution T-C INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1179-S.SNP.3:4590915 chr03:004590915 0 W/4590915-4590915 FN1179-S Single Base Substitution G-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN995-S.SNP.3:4595530 chr03:004595530 0 W/4595530-4595530 FN995-S Single Base Substitution A-T INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN995-S.SNP.3:4595531 chr03:004595531 0 W/4595531-4595531 FN995-S Single Base Substitution A-T INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN-375.SNP.3:4596525 chr03:004596525 0 W/4596525-4596525 FN-375 Single Base Substitution G-A INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3674-S.SNP.3:4597958 chr03:004597958 0 W/4597958-4597958 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.924512;DP=2762;DP4=1398,1258,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.42582e-08;MQSB=0.947706;RPB=0.240448;SGB=46.7622;VDB=0.330186;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S98L|124|LOC_Os03g08870|protein_coding|CODING|LOC_Os03g08870.1|4|1) FN2349.SNP.3:4599458 chr03:004599458 0 W/4599458-4599458 FN2349 SNP C -> A AC=1;AN=192;BQB=0.137358;DP=4725;DP4=2222,2160,18,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01434e-16;MQSB=0.903079;RPB=0.490467;SGB=32.3844;VDB=0.713096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G288V|399|LOC_Os03g08880|protein_coding|CODING|LOC_Os03g08880.1|1|1) FN2349.SNP.3:4599459 chr03:004599459 0 W/4599459-4599459 FN2349 SNP C -> A AC=1;AN=192;BQB=0.993608;DP=4746;DP4=2246,2181,19,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.40138e-17;MQSB=0.910655;RPB=0.921835;SGB=59.6861;VDB=0.583538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G288C|399|LOC_Os03g08880|protein_coding|CODING|LOC_Os03g08880.1|1|1) FN2365.SNP.3:4607145 chr03:004607145 0 W/4607145-4607145 FN2365 SNP G -> C AC=1;AN=192;BQB=0.443844;DP=4200;DP4=2276,1712,20,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.74103e-12;MQSB=0.493633;RPB=0.810816;SGB=46.8644;VDB=0.947001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E24D|489|LOC_Os03g08900|protein_coding|CODING|LOC_Os03g08900.1|1|1) FN395-S.SNP.3:4608860 chr03:004608860 0 W/4608860-4608860 FN395-S Single Base Substitution G-T INTRON HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN849-S.SNP.3:4617233 chr03:004617233 0 W/4617233-4617233 FN849-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g08920 Zinc finger, C3HC4 type domain containing protein, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1006-S.SNP.3:4623828 chr03:004623828 0 W/4623828-4623828 FN1006-S Single Base Substitution T-G INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3849-S.SNP.3:4636154 chr03:004636154 0 W/4636154-4636154 FN3849-S SNP T -> C AC=2;AN=158;BQB=0.991525;DP=3384;DP4=1674,1442,19,22;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.71144e-19;MQSB=0.88057;RPB=0.81982;SGB=83.0549;VDB=0.00417424;EFF=INTRON(MODIFIER||||184|LOC_Os03g08940|protein_coding|CODING|LOC_Os03g08940.1|2|1) FN1028-S.SNP.3:4637800 chr03:004637800 0 W/4637800-4637800 FN1028-S Single Base Substitution T-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1412-S.SNP.3:4637996 chr03:004637996 0 W/4637996-4637996 FN1412-S Single Base Substitution T-C INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3897-S.SNP.3:4642205 chr03:004642205 0 W/4642205-4642205 FN3897-S SNP T -> G AC=2;AN=158;BQB=0.995437;DP=2311;DP4=1357,810,22,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.8232e-17;MQSB=0.999826;RPB=0.135303;SGB=134.456;VDB=0.885929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.3:4642220 chr03:004642220 0 W/4642220-4642220 FN1180-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3757-S.SNP.3:4642220 chr03:004642220 0 W/4642220-4642220 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.981867;DP=2668;DP4=1557,990,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.71369e-07;MQSB=0.999694;RPB=0.805492;SGB=32.5467;VDB=0.986487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.3:4642220 chr03:004642220 0 W/4642220-4642220 FN3991-S SNP C -> T AC=2;AN=168;BQB=0.926128;DP=2400;DP4=1434,830,12,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.48714e-12;MQSB=0.993341;RPB=0.710649;SGB=31.908;VDB=0.157918;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.3:4644874 chr03:004644874 0 W/4644874-4644874 FN1023-S Single Base Substitution C-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2146-S.SNP.3:4649508 chr03:004649508 0 W/4649508-4649508 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.995821;DP=2358;DP4=1180,1051,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.180237;MQB=0.770438;MQSB=0;RPB=0.108039;SGB=-15.8033;VDB=0.0496563;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.3:4649509 chr03:004649509 0 W/4649509-4649509 FN2146-S SNP C -> A AC=1;AN=168;BQB=0.71072;DP=2376;DP4=1183,1074,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.179293;MQB=0.116715;MQSB=0;RPB=0.995368;SGB=-37.7974;VDB=0.856113;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:4658856 chr03:004658856 0 W/4658856-4658856 FN2752-S SNP A -> C AC=2;AN=200;BQB=0.719195;DP=4656;DP4=2335,2015,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.08598e-21;MQSB=0.985692;RPB=0.996105;SGB=-44.0018;VDB=0.44454;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.3:4661640 chr03:004661640 0 W/4661640-4661640 FN732-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN3743-S.SNP.3:4674008 chr03:004674008 0 W/4674008-4674008 FN3743-S SNP A -> G AC=1;AN=190;BQB=0.999879;DP=2911;DP4=1376,1437,17,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.80785e-12;MQSB=0.953995;RPB=0.749313;SGB=94.6341;VDB=0.619248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.3:4676979 chr03:004676979 0 W/4676979-4676979 FN2476 SNP T -> C AC=1;AN=200;BQB=0.971529;DP=5049;DP4=2246,2489,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.73234e-12;MQSB=0.999561;RPB=0.980391;SGB=65.5058;VDB=0.937254;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.3:4678172 chr03:004678172 0 W/4678172-4678172 FN829-S Single Base Substitution A-G INTERGENIC HOMO SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN775-S.SNP.3:4679911 chr03:004679911 0 W/4679911-4679911 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN775-S.SNP.3:4679912 chr03:004679912 0 W/4679912-4679912 FN775-S Single Base Substitution G-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-197.SNP.3:4681998 chr03:004681998 0 W/4681998-4681998 FN-197 Single Base Substitution C-T INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN830-S.SNP.3:4688686 chr03:004688686 0 W/4688686-4688686 FN830-S Single Base Substitution T-A INTERGENIC HOMO SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN3521-S.SNP.3:4689031 chr03:004689031 0 W/4689031-4689031 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.693502;DP=3297;DP4=1662,1554,4,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75529e-09;MQSB=0.30714;RPB=0.829877;SGB=57.244;VDB=0.890562;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.3:4691029 chr03:004691029 0 W/4691029-4691029 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.135936;DP=3108;DP4=1357,1594,11,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.36032e-09;MQSB=0.996552;RPB=0.86846;SGB=20.4984;VDB=0.272284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.3:4703877 chr03:004703877 0 W/4703877-4703877 FN1263-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN_846-8-1.SNP.3:4711124 chr03:004711124 0 W/4711124-4711124 FN_846-8-1 Single Base Substitution C-T HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2173-S.SNP.3:4714640 chr03:004714640 0 W/4714640-4714640 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.908419;DP=1675;DP4=921,672,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.14136e-06;MQSB=0.985414;RPB=0.0174088;SGB=4.1907;VDB=0.216616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.3:4735987 chr03:004735987 0 W/4735987-4735987 FN1656-S Single Base Substitution G-A INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2749-S.SNP.3:4743070 chr03:004743070 0 W/4743070-4743070 FN2749-S SNP C -> A AC=2;AN=200;BQB=0.688814;DP=4336;DP4=2123,1939,19,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000230627;MQB=3.58418e-15;MQSB=0.000227414;RPB=0.978079;SGB=30.3571;VDB=0.459795;EFF=INTERGENIC(MODIFIER||||||||||1) FN876-S.SNP.3:4744570 chr03:004744570 0 W/4744570-4744570 FN876-S Single Base Substitution G-A INTERGENIC HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN584-S.SNP.3:4751033 chr03:004751033 0 W/4751033-4751033 FN584-S Single Base Substitution G-C INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3965-S.SNP.3:4751712 chr03:004751712 0 W/4751712-4751712 FN3965-S SNP A -> C AC=2;AN=168;BQB=0.914815;DP=2136;DP4=1043,910,21,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.03207e-16;MQSB=0.821819;RPB=0.999986;SGB=-8.91027;VDB=0.285191;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.3:4756919 chr03:004756919 0 W/4756919-4756919 FN715-S Single Base Substitution G-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN-412.SNP.3:4765734 chr03:004765734 0 W/4765734-4765734 FN-412 Single Base Substitution A-T INTRON HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN3979-S.SNP.3:4767179 chr03:004767179 0 W/4767179-4767179 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.575216;DP=2637;DP4=1380,1099,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.27923e-06;MQSB=0.970141;RPB=0.959836;SGB=19.7539;VDB=0.297415;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.3:4767502 chr03:004767502 0 W/4767502-4767502 FN523-S Single Base Substitution T-A INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.3:4767502 chr03:004767502 0 W/4767502-4767502 FN532-S Single Base Substitution T-A INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN4190-S.SNP.3:4769440 chr03:004769440 0 W/4769440-4769440 FN4190-S SNP G -> C AC=1;AN=170;BQB=0.455384;DP=2629;DP4=1136,1436,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52224e-07;MQSB=0.954218;RPB=0.925381;SGB=41.7633;VDB=0.0349287;EFF=INTRON(MODIFIER||||708|LOC_Os03g09150|protein_coding|CODING|LOC_Os03g09150.1|3|1) FN2223-S.SNP.3:4769442 chr03:004769442 0 W/4769442-4769442 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.969285;DP=5188;DP4=2499,2335,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73276e-08;MQSB=0.908014;RPB=0.499379;SGB=-13.222;VDB=0.0604799;EFF=INTRON(MODIFIER||||708|LOC_Os03g09150|protein_coding|CODING|LOC_Os03g09150.1|3|1) FN1316-S.SNP.3:4775058 chr03:004775058 0 W/4775058-4775058 FN1316-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1641-S.SNP.3:4777091 chr03:004777091 0 W/4777091-4777091 FN1641-S Single Base Substitution T-A INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3721-S.SNP.3:4777100 chr03:004777100 0 W/4777100-4777100 FN3721-S SNP T -> A AC=1;AN=190;BQB=0.878026;DP=2849;DP4=1310,1429,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07645e-08;MQSB=0.959062;RPB=0.902386;SGB=43.2083;VDB=0.299632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.3:4780233 chr03:004780233 0 W/4780233-4780233 FN1450-S Single Base Substitution A-G INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN4230-S.SNP.3:4791931 chr03:004791931 0 W/4791931-4791931 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.917105;DP=3008;DP4=1492,1438,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.12403e-12;MQSB=0.955728;RPB=0.573264;SGB=78.9707;VDB=0.401387;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I369|465|LOC_Os03g09190|protein_coding|CODING|LOC_Os03g09190.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I273|369|LOC_Os03g09190|protein_coding|CODING|LOC_Os03g09190.2|7|1) FN4230-S.SNP.3:4791932 chr03:004791932 0 W/4791932-4791932 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.586798;DP=3008;DP4=1485,1450,13,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.89024e-14;MQSB=0.975215;RPB=0.854987;SGB=36.9825;VDB=0.418503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R370C|465|LOC_Os03g09190|protein_coding|CODING|LOC_Os03g09190.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R274C|369|LOC_Os03g09190|protein_coding|CODING|LOC_Os03g09190.2|7|1) FN1532-S.SNP.3:4794183 chr03:004794183 0 W/4794183-4794183 FN1532-S Single Base Substitution T-C INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN-30.SNP.3:4794908 chr03:004794908 0 W/4794908-4794908 FN-30 Single Base Substitution T-C INTRON Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2670-S.SNP.3:4802555 chr03:004802555 0 W/4802555-4802555 FN2670-S SNP A -> T AC=1;AN=200;BQB=0.328598;DP=4669;DP4=2028,2409,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14542e-20;MQSB=0.902559;RPB=0.0456361;SGB=141.763;VDB=0.0166409;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.3:4802736 chr03:004802736 0 W/4802736-4802736 FN1656-S Single Base Substitution C-G INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2706-S.SNP.3:4803925 chr03:004803925 0 W/4803925-4803925 FN2706-S SNP A -> C AC=1;AN=200;BQB=0.124111;DP=4904;DP4=2249,2483,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.86919e-12;MQSB=0.99836;RPB=0.919325;SGB=39.9056;VDB=0.460365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.3:4804224 chr03:004804224 0 W/4804224-4804224 FN2379 SNP A -> G AC=1;AN=192;BQB=0.845832;DP=5425;DP4=2898,2116,17,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02153e-16;MQSB=0.724386;RPB=0.734737;SGB=-43.6052;VDB=0.530083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.3:4807409 chr03:004807409 0 W/4807409-4807409 FN3549-S SNP A -> T AC=1;AN=188;BQB=0.241649;DP=3173;DP4=1275,1803,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.54231e-05;MQSB=0.994561;RPB=0.809824;SGB=-35.081;VDB=0.751972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.3:4817066 chr03:004817066 0 W/4817066-4817066 FN2211-S SNP A -> T AC=1;AN=190;BQB=0.754972;DP=5184;DP4=2447,2352,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.89017e-08;MQSB=0.940311;RPB=0.345537;SGB=53.8699;VDB=0.735046;EFF=INTRON(MODIFIER||||598|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.1|1|1),INTRON(MODIFIER||||569|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.2|2|1),INTRON(MODIFIER||||567|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.3|2|1),INTRON(MODIFIER||||433|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.4|3|1),INTRON(MODIFIER||||428|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.5|2|1),INTRON(MODIFIER||||431|LOC_Os03g09220|protein_coding|CODING|LOC_Os03g09220.6|3|1) FN1280-S.SNP.3:4818618 chr03:004818618 0 W/4818618-4818618 FN1280-S Single Base Substitution T-C INTRON HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1280-S.SNP.3:4819636 chr03:004819636 0 W/4819636-4819636 FN1280-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g09220 stage II sporulation protein E, putative, expressed SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_777-2-1.SNP.3:4821623 chr03:004821623 0 W/4821623-4821623 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN703-S.SNP.3:4823754 chr03:004823754 0 W/4823754-4823754 FN703-S Single Base Substitution C-T INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2181-S.SNP.3:4826646 chr03:004826646 0 W/4826646-4826646 FN2181-S SNP T -> C AC=1;AN=190;BQB=0.0833436;DP=4752;DP4=2487,1841,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000210438;MQB=8.18496e-07;MQSB=0.871278;RPB=0.412516;SGB=8.77275;VDB=0.870222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K387E|401|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.4|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K387E|510|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K387E|485|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K387E|456|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.3|7|1),SPLICE_SITE_REGION(LOW||||510|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.1|7|1),SPLICE_SITE_REGION(LOW||||485|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.2|7|1),SPLICE_SITE_REGION(LOW||||456|LOC_Os03g09250|protein_coding|CODING|LOC_Os03g09250.3|7|1) FN378-S.SNP.3:4835027 chr03:004835027 0 W/4835027-4835027 FN378-S Single Base Substitution G-A INTERGENIC HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN-215.SNP.3:4839143 chr03:004839143 0 W/4839143-4839143 FN-215 Single Base Substitution G-T INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1278-S.SNP.3:4839864 chr03:004839864 0 W/4839864-4839864 FN1278-S Single Base Substitution T-C INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN994-S.SNP.3:4860665 chr03:004860665 0 W/4860665-4860665 FN994-S Single Base Substitution A-G INTERGENIC HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN3692-S.SNP.3:4871870 chr03:004871870 0 W/4871870-4871870 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.887307;DP=2555;DP4=1137,1333,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50974e-05;MQSB=0.830581;RPB=0.753385;SGB=30.8803;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:4872303 chr03:004872303 0 W/4872303-4872303 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.948854;DP=4768;DP4=2335,2231,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15307e-10;MQSB=0.977623;RPB=0.94806;SGB=51.0851;VDB=0.833991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:4872304 chr03:004872304 0 W/4872304-4872304 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.752272;DP=4768;DP4=2318,2226,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.59815e-13;MQSB=0.973909;RPB=0.978583;SGB=12.7003;VDB=0.914494;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.3:4873071 chr03:004873071 0 W/4873071-4873071 FN-284 Single Base Substitution G-T INTERGENIC HOMO SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN-284.SNP.3:4873072 chr03:004873072 0 W/4873072-4873072 FN-284 Single Base Substitution G-T INTERGENIC HOMO SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN4235-S.SNP.3:4879203 chr03:004879203 0 W/4879203-4879203 FN4235-S SNP C -> A AC=1;AN=170;BQB=0.794866;DP=2610;DP4=1278,1249,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.83868e-08;MQSB=0.985574;RPB=0.673277;SGB=41.7633;VDB=0.448688;EFF=INTRON(MODIFIER||||347|LOC_Os03g09810|protein_coding|CODING|LOC_Os03g09810.1|4|1) FN1538-S.SNP.3:4881196 chr03:004881196 0 W/4881196-4881196 FN1538-S Single Base Substitution C-T INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN1459-S.SNP.3:4887846 chr03:004887846 0 W/4887846-4887846 FN1459-S Single Base Substitution T-C INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2243-S.SNP.3:4895715 chr03:004895715 0 W/4895715-4895715 FN2243-S SNP T -> C AC=1;AN=190;BQB=0.825048;DP=4693;DP4=2008,2267,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88153e-11;MQSB=0.994381;RPB=0.261288;SGB=-11.5603;VDB=0.081939;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P72|402|LOC_Os03g09840|protein_coding|CODING|LOC_Os03g09840.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P72|402|LOC_Os03g09840|protein_coding|CODING|LOC_Os03g09840.2|3|1) FN474-S.SNP.3:4920288 chr03:004920288 0 W/4920288-4920288 FN474-S Single Base Substitution T-C INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2479.SNP.3:4923644 chr03:004923644 0 W/4923644-4923644 FN2479 SNP G -> A AC=1;AN=200;BQB=0.971308;DP=4707;DP4=1916,2437,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021245;MQB=2.60011e-08;MQSB=0.627459;RPB=0.949321;SGB=-14.9257;VDB=0.709434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.3:4927387 chr03:004927387 0 W/4927387-4927387 FN1173-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2477.SNP.3:4931462 chr03:004931462 0 W/4931462-4931462 FN2477 SNP G -> A AC=2;AN=200;BQB=0.979448;DP=4696;DP4=2110,2324,29,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000425894;MQB=1.02829e-24;MQSB=0.824516;RPB=0.232502;SGB=159.24;VDB=0.587141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.3:4936057 chr03:004936057 0 W/4936057-4936057 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.681935;DP=2673;DP4=1299,1299,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.50388e-05;MQSB=0.916813;RPB=0.97895;SGB=8.27326;VDB=0.699372;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:4937274 chr03:004937274 0 W/4937274-4937274 FN505-S Single Base Substitution A-T INTRON HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2531-S.SNP.3:4941281 chr03:004941281 0 W/4941281-4941281 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.970165;DP=4508;DP4=2434,1755,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.23876e-10;MQSB=0.914373;RPB=0.109761;SGB=14.1348;VDB=0.97315;EFF=UTR_3_PRIME(MODIFIER||513||272|LOC_Os03g09920|protein_coding|CODING|LOC_Os03g09920.1|10|1) FN2271-S.SNP.3:4945388 chr03:004945388 0 W/4945388-4945388 FN2271-S SNP C -> T AC=2;AN=190;BQB=0.919529;DP=3691;DP4=1316,1912,27,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.22752e-23;MQSB=0.502356;RPB=0.199814;SGB=97.7221;VDB=0.235399;EFF=UTR_5_PRIME(MODIFIER||693||243|LOC_Os03g09920|protein_coding|CODING|LOC_Os03g09920.2|1|1),UTR_5_PRIME(MODIFIER||54||272|LOC_Os03g09920|protein_coding|CODING|LOC_Os03g09920.1|1|1) FN2545-S.SNP.3:4947459 chr03:004947459 0 W/4947459-4947459 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.841022;DP=4213;DP4=1816,2120,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07203e-08;MQSB=0.958647;RPB=0.469107;SGB=36.5539;VDB=0.916089;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G515E|656|LOC_Os03g09930|protein_coding|CODING|LOC_Os03g09930.1|9|1),UTR_3_PRIME(MODIFIER||172||401|LOC_Os03g09930|protein_coding|CODING|LOC_Os03g09930.2|9|1) FN3372-S.SNP.3:4952193 chr03:004952193 0 W/4952193-4952193 FN3372-S SNP T -> C AC=1;AN=184;BQB=0.99584;DP=2941;DP4=1308,1511,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0307e-06;MQSB=0.996878;RPB=0.623376;SGB=32.2261;VDB=0.411244;EFF=INTRON(MODIFIER||||401|LOC_Os03g09930|protein_coding|CODING|LOC_Os03g09930.2|1|1) FN-173.SNP.3:4965888 chr03:004965888 0 W/4965888-4965888 FN-173 Single Base Substitution C-G INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN1700-S.SNP.3:4971393 chr03:004971393 0 W/4971393-4971393 FN1700-S SNP C -> T AC=1;AN=188;BQB=0.804251;DP=2827;DP4=1756,1038,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.27831e-06;MQSB=0.939254;RPB=0.966248;SGB=13.3597;VDB=0.167715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.3:4973249 chr03:004973249 0 W/4973249-4973249 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.521463;DP=4351;DP4=2135,1958,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.55358e-09;MQSB=0.83101;RPB=0.490975;SGB=6.15916;VDB=0.67309;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.3:4975265 chr03:004975265 0 W/4975265-4975265 FN596-S Single Base Substitution C-G INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2625-S.SNP.3:4977546 chr03:004977546 0 W/4977546-4977546 FN2625-S SNP A -> C AC=1;AN=200;BQB=0.900972;DP=4418;DP4=2154,2110,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.0263e-13;MQSB=0.633836;RPB=0.992144;SGB=100.316;VDB=0.956077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.3:4980643 chr03:004980643 0 W/4980643-4980643 FN1096-S Single Base Substitution G-T INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3820-S.SNP.3:4982247 chr03:004982247 0 W/4982247-4982247 FN3820-S SNP G -> A AC=2;AN=190;BQB=0.963714;DP=2810;DP4=1280,1367,4,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.3295e-09;MQSB=0.676958;RPB=0.66206;SGB=28.7675;VDB=0.519602;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.3:4986403 chr03:004986403 0 W/4986403-4986403 FN828-S Single Base Substitution T-C INTRON HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN829-S.SNP.3:4996160 chr03:004996160 0 W/4996160-4996160 FN829-S Single Base Substitution C-A INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2473.SNP.3:5002851 chr03:005002851 0 W/5002851-5002851 FN2473 SNP C -> G AC=2;AN=200;BQB=0.999986;DP=4106;DP4=1926,1894,18,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.54067e-23;MQSB=0.999527;RPB=0.979989;SGB=183.209;VDB=0.220698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.3:5007270 chr03:005007270 0 W/5007270-5007270 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.996568;DP=4997;DP4=2466,2309,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17568e-12;MQSB=0.893905;RPB=0.884935;SGB=91.1059;VDB=0.908319;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D488N|1021|LOC_Os03g10000|protein_coding|CODING|LOC_Os03g10000.1|2|1) FN2537-S.SNP.3:5011799 chr03:005011799 0 W/5011799-5011799 FN2537-S SNP C -> T AC=2;AN=198;BQB=0.858621;DP=4273;DP4=2177,1857,15,13;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00234028;MQB=0.000247394;MQSB=1.697e-05;RPB=0.78874;SGB=25.3006;VDB=0.376121;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.3:5011893 chr03:005011893 0 W/5011893-5011893 FN2327 SNP G -> A AC=1;AN=192;BQB=0.440278;DP=4926;DP4=2299,2356,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000406009;MQB=1.89396e-05;MQSB=0.013746;RPB=0.958623;SGB=85.7252;VDB=0.462817;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.3:5012741 chr03:005012741 0 W/5012741-5012741 FN785-S Single Base Substitution C-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2614-S.SNP.3:5015514 chr03:005015514 0 W/5015514-5015514 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.0352401;DP=4341;DP4=2137,1927,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20323e-12;MQSB=0.999275;RPB=0.923916;SGB=-66.8501;VDB=0.819656;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.3:5021303 chr03:005021303 0 W/5021303-5021303 FN1703-S SNP A -> G AC=1;AN=188;BQB=0.0628928;DP=2529;DP4=1470,1007,12,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000749045;MQSB=0.953539;RPB=0.816986;SGB=-15.5431;VDB=0.0214129;EFF=INTERGENIC(MODIFIER||||||||||1) FN-204.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN-204 Single Base Substitution G-A INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-410.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN-410 Single Base Substitution G-A INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-92.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN-92 Single Base Substitution G-A INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1240-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN1240-S Single Base Substitution G-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1340-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN1340-S Single Base Substitution G-A INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3391-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.223176;DP=2615;DP4=1400,1104,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00010523;MQSB=0.968092;RPB=0.902199;SGB=32.2261;VDB=0.959618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN3600-S SNP G -> A AC=1;AN=190;BQB=0.98757;DP=2846;DP4=1537,1195,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.88526e-08;MQSB=0.907912;RPB=0.997509;SGB=58.2031;VDB=0.585335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN3751-S SNP G -> A AC=2;AN=190;BQB=0.98974;DP=2544;DP4=1303,1118,13,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.7027e-10;MQSB=0.999975;RPB=0.755988;SGB=76.4186;VDB=0.239262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN3939-S SNP G -> A AC=2;AN=158;BQB=0.155108;DP=2292;DP4=1248,929,16,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.01878e-07;MQSB=0.99557;RPB=0.656064;SGB=86.3921;VDB=0.411901;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN4011-S SNP G -> A AC=2;AN=168;BQB=0.243906;DP=2485;DP4=1340,1009,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.72287e-09;MQSB=0.578197;RPB=0.963592;SGB=105.343;VDB=0.992138;EFF=INTERGENIC(MODIFIER||||||||||1) FN410-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN439-S Single Base Substitution G-A INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN934-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN996-S.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN996-S Single Base Substitution G-A INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN_949-1.SNP.3:5024961 chr03:005024961 0 W/5024961-5024961 FN_949-1 Single Base Substitution G-A Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN2180-S.SNP.3:5034143 chr03:005034143 0 W/5034143-5034143 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.274014;DP=3834;DP4=1631,1975,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61072e-07;MQSB=0.00140787;RPB=0.90674;SGB=53.6492;VDB=0.662964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.3:5044469 chr03:005044469 0 W/5044469-5044469 FN4305-S SNP C -> A AC=1;AN=170;BQB=0.895175;DP=2480;DP4=1366,1034,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.97344e-06;MQSB=0.691901;RPB=0.999593;SGB=34.878;VDB=0.927008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.3:5044487 chr03:005044487 0 W/5044487-5044487 FN3506-S SNP C -> A AC=2;AN=188;BQB=0.850042;DP=3660;DP4=1870,1705,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.60671e-16;MQSB=0.970635;RPB=0.805184;SGB=89.1337;VDB=0.952681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.3:5048986 chr03:005048986 0 W/5048986-5048986 FN1514-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1514-S.SNP.3:5048988 chr03:005048988 0 W/5048988-5048988 FN1514-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3782-S.SNP.3:5049529 chr03:005049529 0 W/5049529-5049529 FN3782-S SNP T -> C AC=1;AN=190;BQB=0.313258;DP=2289;DP4=860,1162,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00024091;MQSB=0.965566;RPB=0.993056;SGB=-3.65821;VDB=0.759714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T88A|178|LOC_Os03g10040|protein_coding|CODING|LOC_Os03g10040.1|1|1) FN1514-S.SNP.3:5056695 chr03:005056695 0 W/5056695-5056695 FN1514-S Single Base Substitution A-G INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3383-S.SNP.3:5065657 chr03:005065657 0 W/5065657-5065657 FN3383-S SNP G -> C AC=1;AN=184;BQB=0.99918;DP=3151;DP4=1443,1607,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.01401e-12;MQSB=0.999554;RPB=0.390709;SGB=89.4385;VDB=0.416701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.3:5068311 chr03:005068311 0 W/5068311-5068311 FN1516-S Single Base Substitution A-G INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN707-S.SNP.3:5074720 chr03:005074720 0 W/5074720-5074720 FN707-S Single Base Substitution T-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2781-S.SNP.3:5090404 chr03:005090404 0 W/5090404-5090404 FN2781-S SNP G -> A AC=2;AN=198;BQB=0.897465;DP=4395;DP4=2306,1817,32,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.80921e-30;MQSB=0.961333;RPB=0.99713;SGB=228.759;VDB=0.95003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.3:5098253 chr03:005098253 0 W/5098253-5098253 FN2790-S SNP C -> T AC=2;AN=198;BQB=0.741444;DP=4474;DP4=2268,1942,36,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.26947e-34;MQSB=0.987807;RPB=0.537333;SGB=11.1593;VDB=0.0237622;EFF=START_GAINED(LOW||||517|LOC_Os03g10090|protein_coding|CODING|LOC_Os03g10090.1|1|1),UTR_5_PRIME(MODIFIER||211||517|LOC_Os03g10090|protein_coding|CODING|LOC_Os03g10090.1|1|1) FN4204-S.SNP.3:5112402 chr03:005112402 0 W/5112402-5112402 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.921582;DP=3238;DP4=1569,1594,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.27548e-10;MQSB=0.773474;RPB=0.890699;SGB=65.6427;VDB=0.665702;EFF=INTRON(MODIFIER||||521|LOC_Os03g10100|protein_coding|CODING|LOC_Os03g10100.1|1|1) FN4204-S.SNP.3:5112407 chr03:005112407 0 W/5112407-5112407 FN4204-S SNP A -> C AC=1;AN=170;BQB=0.999142;DP=3255;DP4=1571,1592,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.29505e-10;MQSB=0.760112;RPB=0.996709;SGB=29.6545;VDB=0.760738;EFF=INTRON(MODIFIER||||521|LOC_Os03g10100|protein_coding|CODING|LOC_Os03g10100.1|1|1) FN4126-S.SNP.3:5114445 chr03:005114445 0 W/5114445-5114445 FN4126-S SNP A -> T AC=2;AN=182;BQB=0.782972;DP=2789;DP4=1324,1394,6,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.14017e-06;MQSB=0.805554;RPB=0.605731;SGB=53.1331;VDB=0.474283;EFF=UTR_3_PRIME(MODIFIER||592||521|LOC_Os03g10100|protein_coding|CODING|LOC_Os03g10100.1|2|1) FN1630-S.SNP.3:5117584 chr03:005117584 0 W/5117584-5117584 FN1630-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3990-S.SNP.3:5118714 chr03:005118714 0 W/5118714-5118714 FN3990-S SNP C -> A AC=1;AN=168;BQB=0.412686;DP=1775;DP4=776,866,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00056338;MQB=0.00681876;MQSB=0.0596059;RPB=0.490869;SGB=17.3231;VDB=0.330822;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D630E|656|LOC_Os03g10110|protein_coding|CODING|LOC_Os03g10110.1|5|1),UTR_3_PRIME(MODIFIER||819||430|LOC_Os03g10120|protein_coding|CODING|LOC_Os03g10120.1|13|1),UTR_3_PRIME(MODIFIER||819||399|LOC_Os03g10120|protein_coding|CODING|LOC_Os03g10120.2|14|1) W466-5-1.SNP.3:5127730 chr03:005127730 0 W/5127730-5127730 W466-5-1 Single Base Substitution T-C INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2483.SNP.3:5131342 chr03:005131342 0 W/5131342-5131342 FN2483 SNP A -> T AC=2;AN=200;BQB=0.570006;DP=4669;DP4=1823,2534,18,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.76937e-27;MQSB=0.99922;RPB=0.439128;SGB=206.235;VDB=0.181537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.3:5134648 chr03:005134648 0 W/5134648-5134648 FN2273-S SNP G -> A AC=2;AN=190;BQB=0.0897145;DP=3460;DP4=1523,1582,13,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.05596e-08;MQSB=0.0148613;RPB=0.869609;SGB=103.742;VDB=0.84108;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q25|552|LOC_Os03g10140|protein_coding|CODING|LOC_Os03g10140.1|1|1) FN498-S.SNP.3:5137119 chr03:005137119 0 W/5137119-5137119 FN498-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2146-S.SNP.3:5139591 chr03:005139591 0 W/5139591-5139591 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.0748872;DP=4089;DP4=1697,2364,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.73558e-06;MQSB=0.987454;RPB=0.620022;SGB=4.1907;VDB=0.982611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.3:5148029 chr03:005148029 0 W/5148029-5148029 FN2665-S SNP G -> T AC=1;AN=200;BQB=0.732396;DP=4994;DP4=2396,2286,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.61527e-09;MQSB=0.990643;RPB=0.552761;SGB=-14.3206;VDB=0.199737;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.3:5148481 chr03:005148481 0 W/5148481-5148481 FN3978-S SNP T -> A AC=1;AN=168;BQB=0.574165;DP=2687;DP4=1248,1320,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42438e-05;MQSB=0.960246;RPB=0.926074;SGB=31.3172;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.3:5148691 chr03:005148691 0 W/5148691-5148691 FN590-S Single Base Substitution T-A INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN320-S.SNP.3:5148692 chr03:005148692 0 W/5148692-5148692 FN320-S Single Base Substitution A-T INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3452-S.SNP.3:5150048 chr03:005150048 0 W/5150048-5150048 FN3452-S SNP C -> G AC=1;AN=184;BQB=0.54724;DP=2895;DP4=1137,1605,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.83628e-05;MQSB=0.575361;RPB=0.555358;SGB=13.188;VDB=0.931386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.3:5152607 chr03:005152607 0 W/5152607-5152607 FN3390-S SNP C -> A AC=1;AN=184;BQB=0.981824;DP=2899;DP4=1378,1383,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000301032;MQSB=0.976973;RPB=0.990439;SGB=18.1394;VDB=0.916846;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.3:5154559 chr03:005154559 0 W/5154559-5154559 FN4089-S SNP C -> A AC=1;AN=182;BQB=0.704626;DP=2370;DP4=1073,1199,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.06819e-07;MQSB=0.923026;RPB=0.0167225;SGB=3.63874;VDB=0.323267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.3:5155315 chr03:005155315 0 W/5155315-5155315 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.960387;DP=1789;DP4=794,922,5,2;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.0140744;MQSB=0.995386;RPB=0.567877;SGB=25.2211;VDB=0.126837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.3:5157534 chr03:005157534 0 W/5157534-5157534 FN2362 SNP G -> A AC=1;AN=192;BQB=0.965829;DP=5012;DP4=2676,1853,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199521;MQB=5.87621e-05;MQSB=0.707143;RPB=0.890436;SGB=32.6514;VDB=0.883066;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A11T|295|LOC_Os03g10170|protein_coding|CODING|LOC_Os03g10170.1|1|1) FN4129-S.SNP.3:5162870 chr03:005162870 0 W/5162870-5162870 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.999022;DP=3359;DP4=1636,1646,14,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.92959e-13;MQSB=0.789064;RPB=0.323207;SGB=84.7091;VDB=0.524189;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W228*|607|LOC_Os03g10180|protein_coding|CODING|LOC_Os03g10180.1|2|1);LOF=(LOC_Os03g10180|LOC_Os03g10180|1|1.00);NMD=(LOC_Os03g10180|LOC_Os03g10180|1|1.00) FN4129-S.SNP.3:5162871 chr03:005162871 0 W/5162871-5162871 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.713448;DP=3359;DP4=1635,1644,14,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.09295e-14;MQSB=0.877819;RPB=0.311802;SGB=63.7146;VDB=0.402344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G229R|607|LOC_Os03g10180|protein_coding|CODING|LOC_Os03g10180.1|2|1) FN3842-S.SNP.3:5166990 chr03:005166990 0 W/5166990-5166990 FN3842-S SNP G -> T AC=1;AN=190;BQB=0.594227;DP=2667;DP4=1317,1258,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.94521e-08;MQSB=0.62335;RPB=0.702316;SGB=21.1058;VDB=0.142558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.3:5171520 chr03:005171520 0 W/5171520-5171520 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.532497;DP=1495;DP4=494,947,5,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.07957e-05;MQSB=0.923006;RPB=0.808551;SGB=25.5891;VDB=0.326789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.3:5184437 chr03:005184437 0 W/5184437-5184437 FN2167-S SNP G -> A AC=2;AN=168;BQB=0.0449693;DP=3641;DP4=1619,1921,17,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.48019e-12;MQSB=0.990582;RPB=0.0243317;SGB=-123.754;VDB=0.307828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.3:5184951 chr03:005184951 0 W/5184951-5184951 FN-296 Single Base Substitution A-G INTERGENIC HOMO SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN2697-S.SNP.3:5189489 chr03:005189489 0 W/5189489-5189489 FN2697-S SNP A -> G AC=1;AN=200;BQB=0.333584;DP=4516;DP4=1984,2281,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.73825e-10;MQSB=0.936543;RPB=0.78769;SGB=29.4849;VDB=0.716612;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.3:5198481 chr03:005198481 0 W/5198481-5198481 FN224-S Single Base Substitution C-G INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1357-S.SNP.3:5200049 chr03:005200049 0 W/5200049-5200049 FN1357-S Single Base Substitution T-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3570-S.SNP.3:5201873 chr03:005201873 0 W/5201873-5201873 FN3570-S SNP C -> A AC=1;AN=190;BQB=0.165838;DP=3299;DP4=1859,1232,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84275e-07;MQSB=0.529495;RPB=0.798012;SGB=4.11112;VDB=0.989677;EFF=INTRON(MODIFIER||||737|LOC_Os03g10220|protein_coding|CODING|LOC_Os03g10220.1|9|1) FN2113-S.SNP.3:5208234 chr03:005208234 0 W/5208234-5208234 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.153472;DP=4450;DP4=2038,2370,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.64755e-11;MQSB=0.98659;RPB=0.969073;SGB=-71.2065;VDB=0.445897;EFF=INTRON(MODIFIER||||309|LOC_Os03g10230|protein_coding|CODING|LOC_Os03g10230.1|2|1) FN_827-1.SNP.3:5210334 chr03:005210334 0 W/5210334-5210334 FN_827-1 Single Base Substitution T-C HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1662-S.SNP.3:5219487 chr03:005219487 0 W/5219487-5219487 FN1662-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os03g10250 expressed protein SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN3444-S.SNP.3:5219487 chr03:005219487 0 W/5219487-5219487 FN3444-S SNP G -> T AC=1;AN=184;BQB=0.908801;DP=2254;DP4=846,1272,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.77613e-08;MQSB=0.00877912;RPB=0.645371;SGB=42.7914;VDB=0.0822527;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G213W|241|LOC_Os03g10250|protein_coding|CODING|LOC_Os03g10250.1|1|1) FN824-S.SNP.3:5219487 chr03:005219487 0 W/5219487-5219487 FN824-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g10250 expressed protein SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN354-S.SNP.3:5228222 chr03:005228222 0 W/5228222-5228222 FN354-S Single Base Substitution C-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN354-S.SNP.3:5228223 chr03:005228223 0 W/5228223-5228223 FN354-S Single Base Substitution T-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN-179.SNP.3:5228466 chr03:005228466 0 W/5228466-5228466 FN-179 Single Base Substitution T-A INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN1543-S.SNP.3:5228467 chr03:005228467 0 W/5228467-5228467 FN1543-S Single Base Substitution A-T INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN-290.SNP.3:5230178 chr03:005230178 0 W/5230178-5230178 FN-290 Single Base Substitution T-A INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3784-S.SNP.3:5232239 chr03:005232239 0 W/5232239-5232239 FN3784-S SNP T -> A AC=2;AN=190;BQB=0.843897;DP=3333;DP4=1722,1443,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00030003;MQB=2.12945e-15;MQSB=0.333887;RPB=0.999407;SGB=78.7471;VDB=0.11103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.3:5232240 chr03:005232240 0 W/5232240-5232240 FN3784-S SNP T -> C AC=2;AN=190;BQB=0.933292;DP=3347;DP4=1722,1472,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.03301e-15;MQSB=0.422866;RPB=0.812641;SGB=75.1932;VDB=0.416278;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.3:5233356 chr03:005233356 0 W/5233356-5233356 FN-233 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g10270 conserved hypothetical protein SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1413-S.SNP.3:5235244 chr03:005235244 0 W/5235244-5235244 FN1413-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3896-S.SNP.3:5237138 chr03:005237138 0 W/5237138-5237138 FN3896-S SNP C -> T AC=1;AN=158;BQB=0.909015;DP=1413;DP4=617,695,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.40117e-07;MQSB=0.55668;RPB=0.700894;SGB=44.1818;VDB=0.0569463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.3:5237776 chr03:005237776 0 W/5237776-5237776 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.541028;DP=2300;DP4=1310,906,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.20057e-08;MQSB=0.734891;RPB=0.999757;SGB=19.0798;VDB=0.335261;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.3:5246979 chr03:005246979 0 W/5246979-5246979 FN859-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g10290 expressed protein SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3676-S.SNP.3:5248693 chr03:005248693 0 W/5248693-5248693 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.689087;DP=2775;DP4=1397,1272,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.42195e-05;MQSB=0.945723;RPB=0.990994;SGB=35.4339;VDB=0.340487;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q84*|732|LOC_Os03g10290|protein_coding|CODING|LOC_Os03g10290.1|1|1);LOF=(LOC_Os03g10290|LOC_Os03g10290|1|1.00);NMD=(LOC_Os03g10290|LOC_Os03g10290|1|1.00) FN1075-S.SNP.3:5250028 chr03:005250028 0 W/5250028-5250028 FN1075-S Single Base Substitution A-G INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3364-S.SNP.3:5254432 chr03:005254432 0 W/5254432-5254432 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.997459;DP=4125;DP4=2184,1836,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11665e-07;MQSB=0.900053;RPB=0.957956;SGB=53.2642;VDB=0.327707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E272K|379|LOC_Os03g10300|protein_coding|CODING|LOC_Os03g10300.1|2|1) FN2401.SNP.3:5256568 chr03:005256568 0 W/5256568-5256568 FN2401 SNP T -> A AC=2;AN=200;BQB=0.792146;DP=5091;DP4=2178,2642,20,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.64626e-23;MQSB=0.842015;RPB=0.873846;SGB=144.819;VDB=0.361687;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.3:5257569 chr03:005257569 0 W/5257569-5257569 FN508-S Single Base Substitution C-T INTRON HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN701-S.SNP.3:5271831 chr03:005271831 0 W/5271831-5271831 FN701-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g10334 expressed protein SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2153-S.SNP.3:5274250 chr03:005274250 0 W/5274250-5274250 FN2153-S SNP T -> C AC=2;AN=168;BQB=0.106997;DP=4105;DP4=2025,2004,33,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.71465e-24;MQSB=0.978926;RPB=0.36036;SGB=-323.972;VDB=0.71831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.3:5274250 chr03:005274250 0 W/5274250-5274250 FN2448 SNP T -> C AC=1;AN=200;BQB=0.973691;DP=4870;DP4=2367,2236,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43224e-08;MQSB=0.956602;RPB=0.522211;SGB=36.6644;VDB=0.496021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3738-S.SNP.3:5274250 chr03:005274250 0 W/5274250-5274250 FN3738-S SNP T -> C AC=2;AN=190;BQB=0.924923;DP=2999;DP4=1390,1492,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.49581e-13;MQSB=0.994056;RPB=0.815057;SGB=90.0802;VDB=0.636236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.3:5302499 chr03:005302499 0 W/5302499-5302499 FN2191-S SNP A -> T AC=2;AN=190;BQB=0.798969;DP=3305;DP4=1771,1025,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.48085e-13;MQSB=0.0320461;RPB=0.0107991;SGB=99.1879;VDB=0.000114257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D23V|233|LOC_Os03g10410|protein_coding|CODING|LOC_Os03g10410.1|1|1) FN3944-S.SNP.3:5306087 chr03:005306087 0 W/5306087-5306087 FN3944-S SNP G -> A AC=2;AN=168;BQB=0.713169;DP=3177;DP4=1201,1877,12,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.42215e-13;MQSB=0.796086;RPB=0.999222;SGB=114.204;VDB=0.410911;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L371|796|LOC_Os03g10420|protein_coding|CODING|LOC_Os03g10420.1|1|1) FN3356-S.SNP.3:5315883 chr03:005315883 0 W/5315883-5315883 FN3356-S SNP T -> A AC=1;AN=184;BQB=0.667318;DP=3104;DP4=1594,1375,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000322165;MQB=1.59253e-08;MQSB=0.957038;RPB=0.118734;SGB=-16.8012;VDB=0.167079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.3:5317502 chr03:005317502 0 W/5317502-5317502 FN1333-S Single Base Substitution T-A INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1333-S.SNP.3:5317503 chr03:005317503 0 W/5317503-5317503 FN1333-S Single Base Substitution T-A INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN318-S.SNP.3:5324649 chr03:005324649 0 W/5324649-5324649 FN318-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1012-S.SNP.3:5338217 chr03:005338217 0 W/5338217-5338217 FN1012-S Single Base Substitution G-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN715-S.SNP.3:5342902 chr03:005342902 0 W/5342902-5342902 FN715-S Single Base Substitution C-T INTRON HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1657-S.SNP.3:5349378 chr03:005349378 0 W/5349378-5349378 FN1657-S Single Base Substitution T-C INTRON HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1670-S.SNP.3:5353286 chr03:005353286 0 W/5353286-5353286 FN1670-S SNP G -> A AC=2;AN=188;BQB=0.726557;DP=3310;DP4=1788,1471,13,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.58962e-11;MQSB=0.940695;RPB=0.627572;SGB=46.4225;VDB=0.24328;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P369|388|LOC_Os03g10520|protein_coding|CODING|LOC_Os03g10520.1|8|1) FN-363.SNP.3:5354242 chr03:005354242 0 W/5354242-5354242 FN-363 Single Base Substitution G-T INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2218-S.SNP.3:5355301 chr03:005355301 0 W/5355301-5355301 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.999972;DP=4737;DP4=2251,2188,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60455e-10;MQSB=0.940073;RPB=0.938685;SGB=10.3266;VDB=0.408858;EFF=INTRON(MODIFIER||||388|LOC_Os03g10520|protein_coding|CODING|LOC_Os03g10520.1|4|1) FN2467.SNP.3:5356372 chr03:005356372 0 W/5356372-5356372 FN2467 SNP A -> C AC=1;AN=200;BQB=0.987419;DP=4680;DP4=2352,2138,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83618e-13;MQSB=0.999791;RPB=0.913617;SGB=91.1059;VDB=0.807071;EFF=INTRON(MODIFIER||||388|LOC_Os03g10520|protein_coding|CODING|LOC_Os03g10520.1|2|1) FN1394-S.SNP.3:5365719 chr03:005365719 0 W/5365719-5365719 FN1394-S Single Base Substitution C-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN4177-S.SNP.3:5384581 chr03:005384581 0 W/5384581-5384581 FN4177-S SNP C -> G AC=2;AN=170;BQB=0.868871;DP=2648;DP4=1420,1158,12,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.36197e-11;MQSB=0.990121;RPB=0.140172;SGB=65.8619;VDB=0.333083;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.3:5384978 chr03:005384978 0 W/5384978-5384978 FN-269 Single Base Substitution T-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-40.SNP.3:5386492 chr03:005386492 0 W/5386492-5386492 FN-40 Single Base Substitution C-A INTRON Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN2451.SNP.3:5389037 chr03:005389037 0 W/5389037-5389037 FN2451 SNP C -> G AC=1;AN=200;BQB=0.224755;DP=4923;DP4=2230,2408,12,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.26509e-19;MQSB=0.936962;RPB=0.960803;SGB=108.768;VDB=0.145966;EFF=INTRON(MODIFIER||||267|LOC_Os03g10570|protein_coding|CODING|LOC_Os03g10570.1|7|1) FN1307-S.SNP.3:5389463 chr03:005389463 0 W/5389463-5389463 FN1307-S Single Base Substitution G-A INTRON HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN811-S.SNP.3:5392740 chr03:005392740 0 W/5392740-5392740 FN811-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g10580 retrotransposon protein, putative, SINE subclass, expressed SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN-157.SNP.3:5395008 chr03:005395008 0 W/5395008-5395008 FN-157 Single Base Substitution T-A INTRON HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN3306-S.SNP.3:5398401 chr03:005398401 0 W/5398401-5398401 FN3306-S SNP A -> G AC=1;AN=184;BQB=0.969664;DP=2567;DP4=1270,1218,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.70503e-07;MQSB=0.875164;RPB=0.999734;SGB=39.699;VDB=0.460358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.3:5411988 chr03:005411988 0 W/5411988-5411988 FN3325-S SNP A -> G AC=1;AN=184;BQB=0.739689;DP=2779;DP4=1266,1392,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.97482e-12;MQSB=0.999996;RPB=0.56768;SGB=43.4494;VDB=0.321664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.3:5412325 chr03:005412325 0 W/5412325-5412325 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.964372;DP=4768;DP4=2268,2269,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.92577e-16;MQSB=0.922333;RPB=0.696149;SGB=79.9264;VDB=0.3767;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.3:5418752 chr03:005418752 0 W/5418752-5418752 FN536-S Single Base Substitution C-T INTRON HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN536-S.SNP.3:5418756 chr03:005418756 0 W/5418756-5418756 FN536-S Single Base Substitution A-T INTRON HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN2599-S.SNP.3:5424274 chr03:005424274 0 W/5424274-5424274 FN2599-S SNP A -> C AC=2;AN=198;BQB=0.79714;DP=3735;DP4=1936,1608,23,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.58333e-20;MQSB=0.999995;RPB=0.510517;SGB=49.2274;VDB=0.337944;EFF=INTRON(MODIFIER||||322|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.1|2|1),INTRON(MODIFIER||||318|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.3|2|1) FN3440-S.SNP.3:5424612 chr03:005424612 0 W/5424612-5424612 FN3440-S SNP T -> C AC=1;AN=184;BQB=0.896451;DP=3093;DP4=1702,1253,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.04973e-10;MQSB=0.938781;RPB=0.952245;SGB=46.3132;VDB=0.0870779;EFF=INTRON(MODIFIER||||322|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.1|2|1),INTRON(MODIFIER||||318|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.3|2|1) FN2354.SNP.3:5425916 chr03:005425916 0 W/5425916-5425916 FN2354 SNP C -> T AC=2;AN=192;BQB=0.869598;DP=4449;DP4=2113,1898,23,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00022477;MQB=2.33027e-19;MQSB=0.525811;RPB=0.950461;SGB=-45.3478;VDB=0.766332;EFF=UTR_3_PRIME(MODIFIER||2463||318|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.3|3|1),UTR_3_PRIME(MODIFIER||3||322|LOC_Os03g10620|protein_coding|CODING|LOC_Os03g10620.1|3|1) FN-293.SNP.3:5427093 chr03:005427093 0 W/5427093-5427093 FN-293 Single Base Substitution G-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1516-S.SNP.3:5431428 chr03:005431428 0 W/5431428-5431428 FN1516-S Single Base Substitution G-A INTRON HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN899-S.SNP.3:5435212 chr03:005435212 0 W/5435212-5435212 FN899-S Single Base Substitution A-G INTRON HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN974-S.SNP.3:5435466 chr03:005435466 0 W/5435466-5435466 FN974-S Single Base Substitution T-A INTRON HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN-92.SNP.3:5442487 chr03:005442487 0 W/5442487-5442487 FN-92 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g10650 cyclin, putative, expressed SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2261-S.SNP.3:5455879 chr03:005455879 0 W/5455879-5455879 FN2261-S SNP G -> T AC=1;AN=190;BQB=0.357097;DP=4810;DP4=2003,2455,18,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.71947e-25;MQSB=0.425463;RPB=0.693603;SGB=139.163;VDB=0.24536;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.3:5460639 chr03:005460639 0 W/5460639-5460639 FN3851-S SNP C -> A AC=1;AN=158;BQB=0.678061;DP=1935;DP4=893,978,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.99494e-05;MQSB=0.455013;RPB=0.874272;SGB=38.3284;VDB=0.610755;EFF=INTRON(MODIFIER||||542|LOC_Os03g10680|protein_coding|CODING|LOC_Os03g10680.1|2|1) FN1451-S.SNP.3:5462505 chr03:005462505 0 W/5462505-5462505 FN1451-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-246.SNP.3:5465129 chr03:005465129 0 W/5465129-5465129 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3863-S.SNP.3:5470978 chr03:005470978 0 W/5470978-5470978 FN3863-S SNP A -> T AC=2;AN=158;BQB=0.931163;DP=2108;DP4=1383,600,6,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.45579e-09;MQSB=0.00663297;RPB=0.505456;SGB=37.4429;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.3:5473198 chr03:005473198 0 W/5473198-5473198 FN3445-S SNP G -> T AC=1;AN=184;BQB=0.973108;DP=2351;DP4=1037,1252,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28652e-08;MQSB=0.945248;RPB=0.791211;SGB=35.7479;VDB=0.153791;EFF=INTRON(MODIFIER||||112|LOC_Os03g10710|protein_coding|CODING|LOC_Os03g10710.1|2|1) FN2260-S.SNP.3:5490724 chr03:005490724 0 W/5490724-5490724 FN2260-S SNP A -> G AC=1;AN=190;BQB=0.99791;DP=3656;DP4=1969,1421,21,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.00833e-18;MQSB=0.907706;RPB=0.985406;SGB=149.281;VDB=0.00298575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.3:5496493 chr03:005496493 0 W/5496493-5496493 FN2298 SNP G -> A AC=1;AN=192;BQB=0.75487;DP=4301;DP4=2018,2014,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.50302e-14;MQSB=0.955387;RPB=0.414457;SGB=49.4287;VDB=0.128816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A214V|324|LOC_Os03g10770|protein_coding|CODING|LOC_Os03g10770.1|2|1) FN489-S.SNP.3:5501049 chr03:005501049 0 W/5501049-5501049 FN489-S Single Base Substitution T-C INTERGENIC HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1656-S.SNP.3:5511437 chr03:005511437 0 W/5511437-5511437 FN1656-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g10780 flap endonuclease, putative, expressed SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN3058-S.SNP.3:5528095 chr03:005528095 0 W/5528095-5528095 FN3058-S SNP G -> A AC=1;AN=184;BQB=0.987414;DP=3139;DP4=1431,1598,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.99021e-08;MQSB=0.999766;RPB=0.979198;SGB=39.2697;VDB=0.997719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.3:5531093 chr03:005531093 0 W/5531093-5531093 FN3778-S SNP A -> G AC=1;AN=190;BQB=0.999608;DP=2521;DP4=1092,1336,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41256e-07;MQSB=0.902777;RPB=0.364645;SGB=36.1006;VDB=0.441271;EFF=UTR_5_PRIME(MODIFIER||49||605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.1|1|1),UTR_5_PRIME(MODIFIER||49||453|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.4|1|1),UTR_5_PRIME(MODIFIER||49||605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.2|2|1),UTR_5_PRIME(MODIFIER||49||605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.3|2|1) FN1668-S.SNP.3:5532446 chr03:005532446 0 W/5532446-5532446 FN1668-S SNP C -> T AC=2;AN=188;BQB=0.851449;DP=3480;DP4=1559,1854,19,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.17804e-22;MQSB=0.986017;RPB=0.858102;SGB=1.84238;VDB=0.309797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S175F|605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S175F|605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S175F|605|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S175F|453|LOC_Os03g10800|protein_coding|CODING|LOC_Os03g10800.4|3|1) FN3430-S.SNP.3:5541518 chr03:005541518 0 W/5541518-5541518 FN3430-S SNP A -> T AC=1;AN=184;BQB=0.949427;DP=3136;DP4=1448,1582,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.3821e-09;MQSB=0.885349;RPB=0.477617;SGB=57.786;VDB=0.307781;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.3:5546678 chr03:005546678 0 W/5546678-5546678 FN-231 Single Base Substitution C-T INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN4203-S.SNP.3:5547881 chr03:005547881 0 W/5547881-5547881 FN4203-S SNP G -> A AC=1;AN=170;BQB=0.999709;DP=2542;DP4=1195,1283,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.25329e-15;MQSB=0.981188;RPB=0.836417;SGB=79.6325;VDB=0.657735;EFF=INTRON(MODIFIER||||444|LOC_Os03g10820|protein_coding|CODING|LOC_Os03g10820.1|4|1) FN498-S.SNP.3:5549609 chr03:005549609 0 W/5549609-5549609 FN498-S Single Base Substitution A-G INTRON HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1094-S.SNP.3:5558728 chr03:005558728 0 W/5558728-5558728 FN1094-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g10830 hypothetical protein SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN4183-S.SNP.3:5564733 chr03:005564733 0 W/5564733-5564733 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.979756;DP=2408;DP4=1173,1174,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.80854e-10;MQSB=0.994083;RPB=0.855775;SGB=61.2001;VDB=0.848359;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.3:5572770 chr03:005572770 0 W/5572770-5572770 FN441-S Single Base Substitution C-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN343-S.SNP.3:5583695 chr03:005583695 0 W/5583695-5583695 FN343-S Single Base Substitution A-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN1647-S.SNP.3:5597119 chr03:005597119 0 W/5597119-5597119 FN1647-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g10900 disease resistance protein, putative, expressed SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1666-S.SNP.3:5602995 chr03:005602995 0 W/5602995-5602995 FN1666-S SNP T -> G AC=1;AN=188;BQB=0.040285;DP=3693;DP4=1504,2152,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.40511e-09;MQSB=0.997205;RPB=0.836271;SGB=-131.719;VDB=0.942851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.3:5606504 chr03:005606504 0 W/5606504-5606504 FN2534-S SNP A -> T AC=1;AN=198;BQB=0.988294;DP=4199;DP4=2068,1949,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31463e-06;MQSB=0.829009;RPB=0.493594;SGB=25.7687;VDB=0.0817415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.3:5622149 chr03:005622149 0 W/5622149-5622149 FN1140-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2735-S.SNP.3:5625085 chr03:005625085 0 W/5625085-5625085 FN2735-S SNP T -> C AC=2;AN=200;BQB=0.110986;DP=4997;DP4=2508,2226,25,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.09364e-21;MQSB=0.849398;RPB=0.995032;SGB=192.42;VDB=0.882773;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.3:5626717 chr03:005626717 0 W/5626717-5626717 FN-201 Single Base Substitution A-G INTRON HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2361.SNP.3:5635119 chr03:005635119 0 W/5635119-5635119 FN2361 SNP G -> A AC=1;AN=192;BQB=0.99959;DP=5109;DP4=2148,2618,19,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04402e-26;MQSB=0.820209;RPB=0.822815;SGB=98.1513;VDB=0.627273;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.3:5646562 chr03:005646562 0 W/5646562-5646562 FN584-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g10990 retinoblastoma-binding protein-like, putative, expressed SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN584-S.SNP.3:5646563 chr03:005646563 0 W/5646563-5646563 FN584-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g10990 retinoblastoma-binding protein-like, putative, expressed SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3387-S.SNP.3:5648203 chr03:005648203 0 W/5648203-5648203 FN3387-S SNP T -> G AC=1;AN=184;BQB=0.71041;DP=2602;DP4=1235,1298,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.00767e-06;MQSB=0.866142;RPB=0.967333;SGB=32.2261;VDB=0.68905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Cta|I201L|570|LOC_Os03g10990|protein_coding|CODING|LOC_Os03g10990.1|3|1) FN3507-S.SNP.3:5651785 chr03:005651785 0 W/5651785-5651785 FN3507-S SNP A -> G AC=1;AN=188;BQB=0.986011;DP=2593;DP4=1291,1244,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00011399;MQSB=0.991311;RPB=0.616286;SGB=26.2637;VDB=0.832832;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.3:5676892 chr03:005676892 0 W/5676892-5676892 FN3678-S SNP C -> T AC=1;AN=190;BQB=7.6332e-06;DP=2159;DP4=818,1055,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000223692;MQSB=0.969015;RPB=0.466727;SGB=-60.3192;VDB=0.696646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.3:5676925 chr03:005676925 0 W/5676925-5676925 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN910-S.SNP.3:5683474 chr03:005683474 0 W/5683474-5683474 FN910-S Single Base Substitution A-T INTRON HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN4135-S.SNP.3:5695304 chr03:005695304 0 W/5695304-5695304 FN4135-S SNP G -> T AC=1;AN=182;BQB=0.987535;DP=2977;DP4=1536,1367,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.67965e-05;MQSB=0.667534;RPB=0.956922;SGB=30.5793;VDB=0.295648;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.3:5695306 chr03:005695306 0 W/5695306-5695306 FN4135-S SNP C -> T AC=1;AN=182;BQB=0.897556;DP=2991;DP4=1540,1369,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00023797;MQSB=0.610273;RPB=0.982771;SGB=18.0739;VDB=0.677026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.3:5696964 chr03:005696964 0 W/5696964-5696964 FN1440-S Single Base Substitution A-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN-397.SNP.3:5698689 chr03:005698689 0 W/5698689-5698689 FN-397 Single Base Substitution T-A INTRON HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN890-S.SNP.3:5702790 chr03:005702790 0 W/5702790-5702790 FN890-S Single Base Substitution G-A INTERGENIC HOMO SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN890-S.SNP.3:5702791 chr03:005702791 0 W/5702791-5702791 FN890-S Single Base Substitution T-A INTERGENIC HOMO SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN498-S.SNP.3:5703603 chr03:005703603 0 W/5703603-5703603 FN498-S Single Base Substitution G-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1464-S.SNP.3:5705833 chr03:005705833 0 W/5705833-5705833 FN1464-S Single Base Substitution G-C INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. W23-2-1.SNP.3:5706044 chr03:005706044 0 W/5706044-5706044 W23-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN3869-S.SNP.3:5715374 chr03:005715374 0 W/5715374-5715374 FN3869-S SNP T -> G AC=1;AN=158;BQB=0.728584;DP=2372;DP4=1098,1075,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.82298e-05;MQSB=0.842296;RPB=0.891791;SGB=-17.277;VDB=0.993372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.3:5718593 chr03:005718593 0 W/5718593-5718593 FN3549-S SNP C -> T AC=1;AN=188;BQB=0.94469;DP=3548;DP4=1554,1918,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.77438e-10;MQSB=0.995631;RPB=0.917115;SGB=62.6088;VDB=0.326706;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.3:5735209 chr03:005735209 0 W/5735209-5735209 FN522-S Single Base Substitution C-T INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN925-S.SNP.3:5754683 chr03:005754683 0 W/5754683-5754683 FN925-S Single Base Substitution G-A INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3854-S.SNP.3:5762561 chr03:005762561 0 W/5762561-5762561 FN3854-S SNP G -> C AC=2;AN=158;BQB=0.714349;DP=2357;DP4=1054,1190,8,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.48422e-12;MQSB=0.951021;RPB=0.648011;SGB=74.5068;VDB=0.353433;EFF=INTRON(MODIFIER||||789|LOC_Os03g11200|protein_coding|CODING|LOC_Os03g11200.1|10|1) FN3944-S.SNP.3:5766971 chr03:005766971 0 W/5766971-5766971 FN3944-S SNP A -> G AC=2;AN=168;BQB=0.915694;DP=2748;DP4=1192,1376,11,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.06585e-15;MQSB=0.957786;RPB=0.852706;SGB=46.4929;VDB=0.506391;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S53|789|LOC_Os03g11200|protein_coding|CODING|LOC_Os03g11200.1|2|1) FN2701-S.SNP.3:5770672 chr03:005770672 0 W/5770672-5770672 FN2701-S SNP T -> A AC=1;AN=200;BQB=0.116816;DP=5144;DP4=2413,2494,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.89946e-15;MQSB=0.987529;RPB=0.728038;SGB=-38.4742;VDB=0.590526;EFF=INTRON(MODIFIER||||173|LOC_Os03g11210|protein_coding|CODING|LOC_Os03g11210.1|1|1) FN1113-S.SNP.3:5776600 chr03:005776600 0 W/5776600-5776600 FN1113-S Single Base Substitution T-C INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1266-S.SNP.3:5776600 chr03:005776600 0 W/5776600-5776600 FN1266-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3767-S.SNP.3:5776600 chr03:005776600 0 W/5776600-5776600 FN3767-S SNP T -> C AC=2;AN=190;BQB=0.528312;DP=3363;DP4=1899,1313,21,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.84574e-23;MQSB=0.928668;RPB=0.225117;SGB=124.947;VDB=0.00496171;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:5776600 chr03:005776600 0 W/5776600-5776600 FN438-S Single Base Substitution T-C INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN515-S.SNP.3:5776600 chr03:005776600 0 W/5776600-5776600 FN515-S Single Base Substitution T-C INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1113-S.SNP.3:5776605 chr03:005776605 0 W/5776605-5776605 FN1113-S Single Base Substitution T-C INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1266-S.SNP.3:5776605 chr03:005776605 0 W/5776605-5776605 FN1266-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3767-S.SNP.3:5776605 chr03:005776605 0 W/5776605-5776605 FN3767-S SNP T -> C AC=2;AN=190;BQB=0.986704;DP=3350;DP4=1824,1294,24,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1423e-25;MQSB=0.906503;RPB=0.142976;SGB=132.055;VDB=0.00537138;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:5776605 chr03:005776605 0 W/5776605-5776605 FN438-S Single Base Substitution T-C INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN515-S.SNP.3:5776605 chr03:005776605 0 W/5776605-5776605 FN515-S Single Base Substitution T-C INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1113-S.SNP.3:5776613 chr03:005776613 0 W/5776613-5776613 FN1113-S Single Base Substitution A-T INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1266-S.SNP.3:5776613 chr03:005776613 0 W/5776613-5776613 FN1266-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3767-S.SNP.3:5776613 chr03:005776613 0 W/5776613-5776613 FN3767-S SNP A -> T AC=2;AN=190;BQB=0.989299;DP=3346;DP4=1864,1300,21,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.52987e-23;MQSB=0.950346;RPB=0.0602476;SGB=82.3989;VDB=0.00595289;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:5776613 chr03:005776613 0 W/5776613-5776613 FN438-S Single Base Substitution A-T INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN515-S.SNP.3:5776613 chr03:005776613 0 W/5776613-5776613 FN515-S Single Base Substitution A-T INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN-184.SNP.3:5788731 chr03:005788731 0 W/5788731-5788731 FN-184 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g11240 nucleotidyltransferase, putative, expressed SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1577-S.SNP.3:5792500 chr03:005792500 0 W/5792500-5792500 FN1577-S Single Base Substitution C-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2583-S.SNP.3:5797897 chr03:005797897 0 W/5797897-5797897 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.946449;DP=4890;DP4=1973,2601,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4141e-15;MQSB=0.986585;RPB=0.735608;SGB=19.1209;VDB=0.0166816;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.3:5804199 chr03:005804199 0 W/5804199-5804199 FN563-S Single Base Substitution C-G INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3500-S.SNP.3:5804357 chr03:005804357 0 W/5804357-5804357 FN3500-S SNP T -> C AC=1;AN=188;BQB=0.425462;DP=2420;DP4=1040,1325,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.18834e-10;MQSB=0.338065;RPB=0.195079;SGB=5.5382;VDB=0.00217517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.3:5812522 chr03:005812522 0 W/5812522-5812522 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.12275;DP=3222;DP4=1473,1706,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.46203e-07;MQSB=0.667243;RPB=0.817242;SGB=-154.912;VDB=0.465065;EFF=UTR_3_PRIME(MODIFIER||137||771|LOC_Os03g11290|protein_coding|CODING|LOC_Os03g11290.1|2|1) FN2324.SNP.3:5812667 chr03:005812667 0 W/5812667-5812667 FN2324 SNP G -> A AC=2;AN=192;BQB=0.619974;DP=4564;DP4=2084,2211,18,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.9423e-23;MQSB=0.793099;RPB=0.819337;SGB=-47.5261;VDB=0.425718;EFF=UTR_3_PRIME(MODIFIER||282||771|LOC_Os03g11290|protein_coding|CODING|LOC_Os03g11290.1|2|1) FN3064-S.SNP.3:5815921 chr03:005815921 0 W/5815921-5815921 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.214495;DP=3275;DP4=1666,1444,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.88772e-08;MQSB=0.987149;RPB=0.814968;SGB=5.28054;VDB=0.506325;EFF=INTRON(MODIFIER||||312|LOC_Os03g11300|protein_coding|CODING|LOC_Os03g11300.1|2|1),INTRON(MODIFIER||||272|LOC_Os03g11300|protein_coding|CODING|LOC_Os03g11300.2|2|1) FN-186.SNP.3:5822987 chr03:005822987 0 W/5822987-5822987 FN-186 Single Base Substitution G-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1693-S.SNP.3:5823053 chr03:005823053 0 W/5823053-5823053 FN1693-S SNP C -> T AC=2;AN=188;BQB=0.564137;DP=3743;DP4=2317,1371,19,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.12735e-12;MQSB=0.951601;RPB=0.954893;SGB=-41.4749;VDB=0.443628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.3:5824086 chr03:005824086 0 W/5824086-5824086 FN3628-S SNP A -> G AC=2;AN=190;BQB=0.999942;DP=3093;DP4=1110,1705,4,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.97946e-13;MQSB=0.942101;RPB=0.938196;SGB=-11.0065;VDB=0.652314;EFF=SPLICE_SITE_REGION(LOW||||541|LOC_Os03g11320|protein_coding|CODING|LOC_Os03g11320.1|1|1),SPLICE_SITE_REGION(LOW||||541|LOC_Os03g11320|protein_coding|CODING|LOC_Os03g11320.2|1|1),UTR_5_PRIME(MODIFIER||345||541|LOC_Os03g11320|protein_coding|CODING|LOC_Os03g11320.1|1|1),UTR_5_PRIME(MODIFIER||345||541|LOC_Os03g11320|protein_coding|CODING|LOC_Os03g11320.2|1|1) FN1505-S.SNP.3:5830468 chr03:005830468 0 W/5830468-5830468 FN1505-S Single Base Substitution C-A INTRON HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN-74.SNP.3:5841583 chr03:005841583 0 W/5841583-5841583 FN-74 Single Base Substitution C-T INTRON HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1703-S.SNP.3:5848050 chr03:005848050 0 W/5848050-5848050 FN1703-S SNP T -> A AC=1;AN=188;BQB=0.0241644;DP=3601;DP4=1544,2001,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.68379e-07;MQSB=0.999204;RPB=0.950872;SGB=-91.3539;VDB=0.318431;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.3:5850695 chr03:005850695 0 W/5850695-5850695 FN625-S Single Base Substitution C-A INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-148.SNP.3:5852803 chr03:005852803 0 W/5852803-5852803 FN-148 Single Base Substitution G-T INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2092-S.SNP.3:5854946 chr03:005854946 0 W/5854946-5854946 FN2092-S SNP T -> C AC=1;AN=168;BQB=0.633326;DP=4101;DP4=2232,1819,20,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42527e-15;MQSB=0.999957;RPB=0.97372;SGB=-85.3291;VDB=0.606581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V34A|223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V34A|262|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V34A|223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.3|2|1),SPLICE_SITE_REGION(LOW||||223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.1|2|1),SPLICE_SITE_REGION(LOW||||262|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.2|2|1),SPLICE_SITE_REGION(LOW||||223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.3|2|1) FN4080-S.SNP.3:5857091 chr03:005857091 0 W/5857091-5857091 FN4080-S SNP T -> C AC=1;AN=182;BQB=0.789349;DP=2730;DP4=1267,1380,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.84114e-07;MQSB=0.967788;RPB=0.835255;SGB=35.6277;VDB=0.436745;EFF=UTR_3_PRIME(MODIFIER||212||223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.3|7|1),INTRON(MODIFIER||||223|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.1|7|1),INTRON(MODIFIER||||262|LOC_Os03g11360|protein_coding|CODING|LOC_Os03g11360.2|8|1) FN4030-S.SNP.3:5864565 chr03:005864565 0 W/5864565-5864565 FN4030-S SNP G -> T AC=2;AN=168;BQB=0.645476;DP=2536;DP4=1381,1022,15,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.71003e-10;MQSB=0.99995;RPB=0.569048;SGB=12.7756;VDB=0.373188;EFF=INTRON(MODIFIER||||124|LOC_Os03g11390|protein_coding|CODING|LOC_Os03g11390.1|1|1) FN1349-S.SNP.3:5867704 chr03:005867704 0 W/5867704-5867704 FN1349-S Single Base Substitution A-G INTRON HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-256.SNP.3:5868805 chr03:005868805 0 W/5868805-5868805 FN-256 Single Base Substitution A-G INTRON HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN775-S.SNP.3:5869425 chr03:005869425 0 W/5869425-5869425 FN775-S Single Base Substitution T-G INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN4161-S.SNP.3:5871305 chr03:005871305 0 W/5871305-5871305 FN4161-S SNP G -> A AC=1;AN=170;BQB=0.970852;DP=2493;DP4=1187,1216,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.60399e-07;MQSB=0.993282;RPB=0.0477137;SGB=43.4296;VDB=0.0934132;EFF=INTRON(MODIFIER||||533|LOC_Os03g11410|protein_coding|CODING|LOC_Os03g11410.1|1|1) FN2478.SNP.3:5872414 chr03:005872414 0 W/5872414-5872414 FN2478 SNP A -> T AC=1;AN=200;BQB=0.567147;DP=4830;DP4=2331,2156,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.99628e-10;MQSB=0.81767;RPB=0.998873;SGB=-8.87404;VDB=0.613154;EFF=INTRON(MODIFIER||||533|LOC_Os03g11410|protein_coding|CODING|LOC_Os03g11410.1|5|1) FN818-S.SNP.3:5891402 chr03:005891402 0 W/5891402-5891402 FN818-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g11430 expressed protein SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN3514-S.SNP.3:5900074 chr03:005900074 0 W/5900074-5900074 FN3514-S SNP T -> C AC=1;AN=188;BQB=0.884713;DP=1857;DP4=663,1124,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000172433;MQSB=9.12893e-09;RPB=0.998704;SGB=30.8063;VDB=0.14548;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.3:5922104 chr03:005922104 0 W/5922104-5922104 FN1619-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g11470 DEAD/DEAH box helicase domain containing protein, expressed SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-162.SNP.3:5925808 chr03:005925808 0 W/5925808-5925808 FN-162 Single Base Substitution A-G INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1405-S.SNP.3:5926907 chr03:005926907 0 W/5926907-5926907 FN1405-S Single Base Substitution A-T INTRON HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN805-S.SNP.3:5948308 chr03:005948308 0 W/5948308-5948308 FN805-S Single Base Substitution A-T INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN805-S.SNP.3:5948328 chr03:005948328 0 W/5948328-5948328 FN805-S Single Base Substitution A-G INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN4314-S.SNP.3:5950634 chr03:005950634 0 W/5950634-5950634 FN4314-S SNP G -> A AC=1;AN=170;BQB=0.931876;DP=2582;DP4=1223,1288,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.36427e-07;MQSB=0.993706;RPB=0.990004;SGB=52.3148;VDB=0.574591;EFF=INTRON(MODIFIER||||1044|LOC_Os03g11490|protein_coding|CODING|LOC_Os03g11490.1|3|1) FN3733-S.SNP.3:5972771 chr03:005972771 0 W/5972771-5972771 FN3733-S SNP C -> T AC=2;AN=190;BQB=0.905696;DP=2754;DP4=1333,1296,6,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5672e-08;MQSB=0.978473;RPB=0.992257;SGB=50.3161;VDB=0.0983399;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S542|687|LOC_Os03g11520|protein_coding|CODING|LOC_Os03g11520.1|11|1),UTR_3_PRIME(MODIFIER||853||518|LOC_Os03g11520|protein_coding|CODING|LOC_Os03g11520.2|11|1) FN981-S.SNP.3:5973607 chr03:005973607 0 W/5973607-5973607 FN981-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1116-S.SNP.3:5979680 chr03:005979680 0 W/5979680-5979680 FN1116-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1116-S.SNP.3:5979681 chr03:005979681 0 W/5979681-5979681 FN1116-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1263-S.SNP.3:5985379 chr03:005985379 0 W/5985379-5985379 FN1263-S Single Base Substitution A-T INTRON HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1263-S.SNP.3:5985380 chr03:005985380 0 W/5985380-5985380 FN1263-S Single Base Substitution A-T INTRON HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN4258-S.SNP.3:5986262 chr03:005986262 0 W/5986262-5986262 FN4258-S SNP T -> C AC=1;AN=170;BQB=0.90834;DP=2640;DP4=1169,1282,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.83255e-05;MQSB=0.996957;RPB=0.803627;SGB=43.4296;VDB=0.694283;EFF=INTRON(MODIFIER||||397|LOC_Os03g11550|protein_coding|CODING|LOC_Os03g11550.2|2|1),INTRON(MODIFIER||||401|LOC_Os03g11550|protein_coding|CODING|LOC_Os03g11550.1|2|1) FN1577-S.SNP.3:5995069 chr03:005995069 0 W/5995069-5995069 FN1577-S Single Base Substitution T-G INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3881-S.SNP.3:5997651 chr03:005997651 0 W/5997651-5997651 FN3881-S SNP C -> T AC=2;AN=158;BQB=0.27459;DP=2390;DP4=1064,1196,14,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.18378e-10;MQSB=0.603541;RPB=0.871351;SGB=87.9846;VDB=0.784437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.3:5999250 chr03:005999250 0 W/5999250-5999250 FN3540-S SNP T -> A AC=1;AN=188;BQB=0.886729;DP=2887;DP4=1301,1482,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.90326e-10;MQSB=0.0409831;RPB=0.994228;SGB=76.2387;VDB=0.803842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.3:6006875 chr03:006006875 0 W/6006875-6006875 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.983344;DP=2541;DP4=1280,1174,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62233e-08;MQSB=0.996051;RPB=0.501909;SGB=60.1755;VDB=0.1461;EFF=UTR_3_PRIME(MODIFIER||275||979|LOC_Os03g11580|protein_coding|CODING|LOC_Os03g11580.1|5|1) FN1625-S.SNP.3:6008766 chr03:006008766 0 W/6008766-6008766 FN1625-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g11580 expressed protein SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.3:6008766 chr03:006008766 0 W/6008766-6008766 FN1626-S SNP C -> A AC=1;AN=188;BQB=0.444919;DP=3705;DP4=1803,1864,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.82695e-10;MQSB=0.997267;RPB=0.830055;SGB=17.8846;VDB=0.515324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q613H|979|LOC_Os03g11580|protein_coding|CODING|LOC_Os03g11580.1|4|1) FN487-S.SNP.3:6013282 chr03:006013282 0 W/6013282-6013282 FN487-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN1332-S.SNP.3:6017099 chr03:006017099 0 W/6017099-6017099 FN1332-S Single Base Substitution A-C UTR_5_PRIME HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1332-S.SNP.3:6017100 chr03:006017100 0 W/6017100-6017100 FN1332-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN581-S.SNP.3:6032731 chr03:006032731 0 W/6032731-6032731 FN581-S Single Base Substitution T-C INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3358-S.SNP.3:6048833 chr03:006048833 0 W/6048833-6048833 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.95759;DP=3113;DP4=1599,1348,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.09948e-10;MQSB=0.747982;RPB=0.987166;SGB=30.8405;VDB=0.452989;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.3:6060102 chr03:006060102 0 W/6060102-6060102 FN563-S Single Base Substitution T-C INTRON HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN4156-S.SNP.3:6065025 chr03:006065025 0 W/6065025-6065025 FN4156-S SNP A -> G AC=1;AN=170;BQB=0.924201;DP=2451;DP4=1192,1174,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000193427;MQSB=0.985906;RPB=0.99999;SGB=30.1021;VDB=0.601236;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.3:6068579 chr03:006068579 0 W/6068579-6068579 FN400-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g11630 transposon protein, putative, Mutator sub-class, expressed SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1695-S.SNP.3:6072578 chr03:006072578 0 W/6072578-6072578 FN1695-S SNP T -> G AC=2;AN=188;BQB=9.83237e-05;DP=3238;DP4=1550,1591,12,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.98598e-10;MQSB=0.999879;RPB=0.994556;SGB=-72.0994;VDB=0.997519;EFF=INTRON(MODIFIER||||78|LOC_Os03g11640|protein_coding|CODING|LOC_Os03g11640.1|1|1) FN4095-S.SNP.3:6072615 chr03:006072615 0 W/6072615-6072615 FN4095-S SNP C -> A AC=2;AN=182;BQB=0.74907;DP=2701;DP4=1309,1274,9,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.025e-12;MQSB=0.993642;RPB=0.480774;SGB=63.7146;VDB=0.389889;EFF=INTRON(MODIFIER||||78|LOC_Os03g11640|protein_coding|CODING|LOC_Os03g11640.1|1|1) FN4095-S.SNP.3:6072616 chr03:006072616 0 W/6072616-6072616 FN4095-S SNP T -> A AC=2;AN=182;BQB=0.559842;DP=2697;DP4=1306,1262,7,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.0458e-11;MQSB=0.976712;RPB=0.70859;SGB=67.2255;VDB=0.357894;EFF=INTRON(MODIFIER||||78|LOC_Os03g11640|protein_coding|CODING|LOC_Os03g11640.1|1|1) FN3808-S.SNP.3:6081073 chr03:006081073 0 W/6081073-6081073 FN3808-S SNP A -> T AC=2;AN=190;BQB=0.773882;DP=2887;DP4=1452,1317,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.00786e-11;MQSB=0.906316;RPB=0.921365;SGB=75.1932;VDB=0.182894;EFF=INTRON(MODIFIER||||515|LOC_Os03g11650|protein_coding|CODING|LOC_Os03g11650.1|2|1) 822-5-5.SNP.3:6081651 chr03:006081651 0 W/6081651-6081651 822-5-5 Single Base Substitution C-A INTRON Homo SNo: 1493, Mutant_ID: 822-5-5, Generation: M2, Mutations: 21, Genes: 100, Seed availability: Yes. 822-5-6.SNP.3:6081651 chr03:006081651 0 W/6081651-6081651 822-5-6 Single Base Substitution C-A INTRON Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN_822-5-1.SNP.3:6081651 chr03:006081651 0 W/6081651-6081651 FN_822-5-1 Single Base Substitution C-A Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1029-S.SNP.3:6097040 chr03:006097040 0 W/6097040-6097040 FN1029-S Single Base Substitution A-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2204-S.SNP.3:6097092 chr03:006097092 0 W/6097092-6097092 FN2204-S SNP A -> G AC=2;AN=190;BQB=0.597187;DP=4486;DP4=1972,1685,26,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.10754e-21;MQSB=0.514904;RPB=0.591944;SGB=-50.6004;VDB=0.0982671;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.3:6097246 chr03:006097246 0 W/6097246-6097246 FN-155 Single Base Substitution G-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2540-S.SNP.3:6100962 chr03:006100962 0 W/6100962-6100962 FN2540-S SNP T -> C AC=1;AN=198;BQB=0.76378;DP=4490;DP4=2085,2204,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000222717;MQB=1.71416e-11;MQSB=0.0851419;RPB=0.83461;SGB=65.3149;VDB=0.691746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.3:6108489 chr03:006108489 0 W/6108489-6108489 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.833462;DP=3750;DP4=2264,1237,25,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.99692e-20;MQSB=0.417145;RPB=0.435912;SGB=115.647;VDB=0.690884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.3:6118678 chr03:006118678 0 W/6118678-6118678 FN2484 SNP G -> A AC=2;AN=200;BQB=0.917942;DP=4656;DP4=2174,2243,29,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.80981e-26;MQSB=0.99157;RPB=0.67908;SGB=60.8554;VDB=0.802329;EFF=UTR_3_PRIME(MODIFIER||1683||533|LOC_Os03g11690|protein_coding|CODING|LOC_Os03g11690.2|2|1),UTR_3_PRIME(MODIFIER||1683||533|LOC_Os03g11690|protein_coding|CODING|LOC_Os03g11690.1|4|1) FN2713-S.SNP.3:6124726 chr03:006124726 0 W/6124726-6124726 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.999501;DP=4752;DP4=2052,2452,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22555e-15;MQSB=0.9685;RPB=0.99508;SGB=90.7419;VDB=0.961575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.3:6129404 chr03:006129404 0 W/6129404-6129404 FN2291 SNP A -> T AC=2;AN=192;BQB=0.56497;DP=5096;DP4=2427,2229,34,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.13739e-38;MQSB=0.912708;RPB=0.942987;SGB=250.077;VDB=0.204833;EFF=INTRON(MODIFIER||||919|LOC_Os03g11720|protein_coding|CODING|LOC_Os03g11720.1|3|1) FN824-S.SNP.3:6136467 chr03:006136467 0 W/6136467-6136467 FN824-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2477.SNP.3:6138313 chr03:006138313 0 W/6138313-6138313 FN2477 SNP T -> A AC=2;AN=200;BQB=0.999638;DP=4835;DP4=2325,2229,28,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.86289e-23;MQSB=0.666924;RPB=0.985278;SGB=152.03;VDB=0.834433;EFF=INTRON(MODIFIER||||571|LOC_Os03g11734|protein_coding|CODING|LOC_Os03g11734.1|2|1),INTRON(MODIFIER||||495|LOC_Os03g11734|protein_coding|CODING|LOC_Os03g11734.3|1|1) FN2649-S.SNP.3:6141836 chr03:006141836 0 W/6141836-6141836 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.361698;DP=5148;DP4=2612,2196,5,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=5.45654e-10;MQSB=0.651495;RPB=0.936211;SGB=63.4749;VDB=0.219507;EFF=INTRON(MODIFIER||||495|LOC_Os03g11734|protein_coding|CODING|LOC_Os03g11734.3|1|1),INTRON(MODIFIER||||571|LOC_Os03g11734|protein_coding|CODING|LOC_Os03g11734.1|1|1) FN869-S.SNP.3:6141897 chr03:006141897 0 W/6141897-6141897 FN869-S Single Base Substitution T-C INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2219-S.SNP.3:6147830 chr03:006147830 0 W/6147830-6147830 FN2219-S SNP A -> G AC=1;AN=190;BQB=0.999208;DP=5077;DP4=2342,2345,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30697e-16;MQSB=0.856477;RPB=0.835662;SGB=92.9626;VDB=0.731634;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.3:6149901 chr03:006149901 0 W/6149901-6149901 FN_N2-29a-1 Single Base Substitution A-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2542-S.SNP.3:6150959 chr03:006150959 0 W/6150959-6150959 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.90232;DP=3779;DP4=1719,1671,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.29937e-07;MQSB=0.0149964;RPB=0.998105;SGB=63.3342;VDB=0.525709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.3:6166646 chr03:006166646 0 W/6166646-6166646 FN2656-S SNP A -> T AC=2;AN=200;BQB=0.0156441;DP=4297;DP4=1808,2165,20,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.18092e-23;MQSB=0.198882;RPB=0.519114;SGB=177.266;VDB=0.999768;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.3:6178931 chr03:006178931 0 W/6178931-6178931 FN_822-5-1 Single Base Substitution G-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2629-S.SNP.3:6182949 chr03:006182949 0 W/6182949-6182949 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.980352;DP=4786;DP4=2303,2219,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208943;MQB=4.35402e-11;MQSB=0.730841;RPB=0.853357;SGB=100.316;VDB=0.176814;EFF=INTRON(MODIFIER||||149|LOC_Os03g11819|protein_coding|CODING|LOC_Os03g11819.1|2|1) FN2089-S.SNP.3:6194949 chr03:006194949 0 W/6194949-6194949 FN2089-S SNP T -> C AC=1;AN=168;BQB=0.408134;DP=2985;DP4=1193,1760,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00100503;MQB=0.0186702;MQSB=0.998294;RPB=0.719621;SGB=-16.665;VDB=0.338855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.3:6204365 chr03:006204365 0 W/6204365-6204365 FN2677-S SNP C -> A AC=1;AN=200;BQB=0.796084;DP=4702;DP4=2099,2325,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10031e-12;MQSB=0.895584;RPB=0.821015;SGB=11.0951;VDB=0.772671;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.3:6205749 chr03:006205749 0 W/6205749-6205749 FN3824-S SNP G -> T AC=1;AN=190;BQB=0.730159;DP=2682;DP4=1227,1369,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10471e-05;MQSB=0.997366;RPB=0.901449;SGB=49.0954;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.3:6211312 chr03:006211312 0 W/6211312-6211312 FN2673-S SNP T -> C AC=2;AN=200;BQB=0.629745;DP=4480;DP4=1997,2219,28,18;HOB=0.0198;ICB=0.495051;MQ=17;MQ0F=0.294196;MQB=0.000513468;MQSB=5.60519e-14;RPB=0.128059;SGB=155.635;VDB=0.158296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.3:6221470 chr03:006221470 0 W/6221470-6221470 FN2181-S SNP T -> A AC=1;AN=190;BQB=0.548403;DP=4569;DP4=1918,2287,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000875465;MQB=0.000923425;MQSB=0.539242;RPB=0.526003;SGB=46.7622;VDB=0.0205269;EFF=INTRON(MODIFIER||||217|LOC_Os03g11874|protein_coding|CODING|LOC_Os03g11874.1|3|1) FN3940-S.SNP.3:6221703 chr03:006221703 0 W/6221703-6221703 FN3940-S SNP A -> G AC=2;AN=158;BQB=0.741572;DP=1369;DP4=245,799,15,17;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=2.29289e-06;MQSB=8.84355e-20;RPB=0.0813383;SGB=-49.0007;VDB=0.918615;EFF=INTRON(MODIFIER||||217|LOC_Os03g11874|protein_coding|CODING|LOC_Os03g11874.1|3|1) FN4221-S.SNP.3:6222962 chr03:006222962 0 W/6222962-6222962 FN4221-S SNP C -> A AC=1;AN=170;BQB=0.911362;DP=2474;DP4=1153,1258,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.38619e-10;MQSB=0.103863;RPB=0.991153;SGB=70.0854;VDB=0.637622;EFF=INTRON(MODIFIER||||217|LOC_Os03g11874|protein_coding|CODING|LOC_Os03g11874.1|3|1) FN2628-S.SNP.3:6225314 chr03:006225314 0 W/6225314-6225314 FN2628-S SNP T -> G AC=2;AN=200;BQB=0.814898;DP=4928;DP4=2230,2424,22,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.14607e-24;MQSB=0.821895;RPB=0.624029;SGB=112.85;VDB=0.751072;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.3:6241093 chr03:006241093 0 W/6241093-6241093 FN485-S Single Base Substitution A-G INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1348-S.SNP.3:6243905 chr03:006243905 0 W/6243905-6243905 FN1348-S Single Base Substitution C-G INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN462-S.SNP.3:6251141 chr03:006251141 0 W/6251141-6251141 FN462-S Single Base Substitution A-C INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1622-S.SNP.3:6252121 chr03:006252121 0 W/6252121-6252121 FN1622-S Single Base Substitution C-G INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN679-S.SNP.3:6264350 chr03:006264350 0 W/6264350-6264350 FN679-S Single Base Substitution G-A INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN1062-S.SNP.3:6271570 chr03:006271570 0 W/6271570-6271570 FN1062-S Single Base Substitution C-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1429-S.SNP.3:6278231 chr03:006278231 0 W/6278231-6278231 FN1429-S Single Base Substitution T-A INTRON HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN714-S.SNP.3:6282586 chr03:006282586 0 W/6282586-6282586 FN714-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. 705-6.SNP.3:6286043 chr03:006286043 0 W/6286043-6286043 705-6 Single Base Substitution G-T UTR_3_PRIME Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN2479.SNP.3:6288325 chr03:006288325 0 W/6288325-6288325 FN2479 SNP C -> A AC=1;AN=200;BQB=0.985307;DP=4114;DP4=1862,1902,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000243072;MQB=1.76501e-09;MQSB=0.970419;RPB=0.58977;SGB=68.0801;VDB=0.251293;EFF=UTR_5_PRIME(MODIFIER||439||573|LOC_Os03g12000|protein_coding|CODING|LOC_Os03g12000.1|1|1) FN2479.SNP.3:6288329 chr03:006288329 0 W/6288329-6288329 FN2479 SNP G -> A AC=1;AN=200;BQB=0.88783;DP=4143;DP4=1870,2004,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69784e-11;MQSB=0.747285;RPB=0.293499;SGB=34.6953;VDB=0.0733654;EFF=UTR_5_PRIME(MODIFIER||443||573|LOC_Os03g12000|protein_coding|CODING|LOC_Os03g12000.1|1|1) FN2479.SNP.3:6288330 chr03:006288330 0 W/6288330-6288330 FN2479 SNP C -> A AC=1;AN=200;BQB=0.999748;DP=4142;DP4=1885,1908,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000241429;MQB=9.44119e-11;MQSB=0.970619;RPB=0.258012;SGB=47.4799;VDB=0.105604;EFF=UTR_5_PRIME(MODIFIER||444||573|LOC_Os03g12000|protein_coding|CODING|LOC_Os03g12000.1|1|1) FN1309-S.SNP.3:6314468 chr03:006314468 0 W/6314468-6314468 FN1309-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1515-S.SNP.3:6314468 chr03:006314468 0 W/6314468-6314468 FN1515-S Single Base Substitution C-T INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2157-S.SNP.3:6314468 chr03:006314468 0 W/6314468-6314468 FN2157-S SNP C -> T AC=1;AN=168;BQB=0.996803;DP=2347;DP4=1381,937,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000280267;MQSB=0.0296749;RPB=0.957837;SGB=21.0249;VDB=0.907304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.3:6314468 chr03:006314468 0 W/6314468-6314468 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.944812;DP=2376;DP4=1185,1123,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000193786;MQSB=0.955471;RPB=0.0707632;SGB=25.2211;VDB=0.034401;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.3:6319460 chr03:006319460 0 W/6319460-6319460 FN4258-S SNP A -> G AC=1;AN=170;BQB=0.56209;DP=2932;DP4=1234,1576,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.89282e-06;MQSB=0.999063;RPB=0.492467;SGB=-2.88077;VDB=0.739017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.3:6327819 chr03:006327819 0 W/6327819-6327819 FN3883-S SNP C -> T AC=1;AN=158;BQB=0.735514;DP=2749;DP4=1342,1295,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.39475e-11;MQSB=0.999064;RPB=0.717162;SGB=33.2965;VDB=0.615033;EFF=START_GAINED(LOW||||116|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.3|2|1),START_GAINED(LOW||||116|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.6|2|1),UTR_5_PRIME(MODIFIER||6214||116|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.3|2|1),UTR_5_PRIME(MODIFIER||6214||116|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.6|2|1),INTRON(MODIFIER||||122|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.2|1|1),INTRON(MODIFIER||||189|LOC_Os03g12064|protein_coding|CODING|LOC_Os03g12064.1|1|1) FN4183-S.SNP.3:6339359 chr03:006339359 0 W/6339359-6339359 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.529697;DP=2479;DP4=1135,1238,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000403388;MQB=1.63244e-06;MQSB=0.636153;RPB=0.955253;SGB=31.4354;VDB=0.792905;EFF=INTRON(MODIFIER||||215|LOC_Os03g12080|protein_coding|CODING|LOC_Os03g12080.1|1|1) FN1297-S.SNP.3:6339645 chr03:006339645 0 W/6339645-6339645 FN1297-S Single Base Substitution G-A INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-82.SNP.3:6340007 chr03:006340007 0 W/6340007-6340007 FN-82 Single Base Substitution C-G INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2723-S.SNP.3:6340620 chr03:006340620 0 W/6340620-6340620 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.187001;DP=2479;DP4=1188,1118,7,3;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000403388;MQB=0.00121756;MQSB=2.31776e-13;RPB=0.731253;SGB=25.849;VDB=0.178328;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W153*|215|LOC_Os03g12080|protein_coding|CODING|LOC_Os03g12080.1|2|1) FN1064-S.SNP.3:6343935 chr03:006343935 0 W/6343935-6343935 FN1064-S Single Base Substitution T-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1064-S.SNP.3:6343936 chr03:006343936 0 W/6343936-6343936 FN1064-S Single Base Substitution C-G INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2435.SNP.3:6348495 chr03:006348495 0 W/6348495-6348495 FN2435 SNP T -> A AC=2;AN=200;BQB=0.68753;DP=5005;DP4=2179,2464,19,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.06144e-30;MQSB=0.970109;RPB=0.453791;SGB=120.666;VDB=0.812359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.3:6350997 chr03:006350997 0 W/6350997-6350997 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.977035;DP=2611;DP4=1263,1270,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60224e-06;MQSB=0.999995;RPB=0.988607;SGB=44.2207;VDB=0.386007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.3:6355800 chr03:006355800 0 W/6355800-6355800 FN2157-S SNP G -> A AC=1;AN=168;BQB=0.140524;DP=3799;DP4=2156,1575,21,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19222e-13;MQSB=0.964565;RPB=0.73095;SGB=-82.1908;VDB=0.588238;EFF=INTRON(MODIFIER||||329|LOC_Os03g12110|protein_coding|CODING|LOC_Os03g12110.1|1|1),INTRON(MODIFIER||||282|LOC_Os03g12110|protein_coding|CODING|LOC_Os03g12110.2|1|1) FN2419.SNP.3:6356029 chr03:006356029 0 W/6356029-6356029 FN2419 SNP T -> C AC=2;AN=200;BQB=0.895583;DP=5078;DP4=2235,2494,40,50;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=0;MQSB=0.98499;RPB=0.96688;SGB=254.48;VDB=0.993418;EFF=INTRON(MODIFIER||||329|LOC_Os03g12110|protein_coding|CODING|LOC_Os03g12110.1|1|1),INTRON(MODIFIER||||282|LOC_Os03g12110|protein_coding|CODING|LOC_Os03g12110.2|1|1) FN3494-S.SNP.3:6360077 chr03:006360077 0 W/6360077-6360077 FN3494-S SNP T -> A AC=1;AN=184;BQB=0.890347;DP=2436;DP4=1246,1112,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.38104e-08;MQSB=0.914431;RPB=0.601777;SGB=25.7969;VDB=0.822283;EFF=INTRON(MODIFIER||||886|LOC_Os03g12120|protein_coding|CODING|LOC_Os03g12120.1|13|1) FN2788-S.SNP.3:6361076 chr03:006361076 0 W/6361076-6361076 FN2788-S SNP G -> T AC=2;AN=198;BQB=0.757601;DP=4280;DP4=2015,2018,21,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.49287e-26;MQSB=0.898891;RPB=0.998313;SGB=214.973;VDB=0.870106;EFF=INTRON(MODIFIER||||886|LOC_Os03g12120|protein_coding|CODING|LOC_Os03g12120.1|12|1) FN1610-S.SNP.3:6374528 chr03:006374528 0 W/6374528-6374528 FN1610-S Single Base Substitution A-C INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN565-S.SNP.3:6377061 chr03:006377061 0 W/6377061-6377061 FN565-S Single Base Substitution T-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN711-S.SNP.3:6383840 chr03:006383840 0 W/6383840-6383840 FN711-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g12160 leucine-rich repeat family protein, putative, expressed SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN721-S.SNP.3:6403120 chr03:006403120 0 W/6403120-6403120 FN721-S Single Base Substitution A-G INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3628-S.SNP.3:6403715 chr03:006403715 0 W/6403715-6403715 FN3628-S SNP C -> T AC=2;AN=190;BQB=0.875665;DP=2833;DP4=1367,1368,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.11688e-19;MQSB=0.973091;RPB=0.285323;SGB=131.065;VDB=0.875363;EFF=SPLICE_SITE_REGION(LOW||||421|LOC_Os03g12210|protein_coding|CODING|LOC_Os03g12210.1|1|1),INTRON(MODIFIER||||421|LOC_Os03g12210|protein_coding|CODING|LOC_Os03g12210.1|1|1) FN2194-S.SNP.3:6405141 chr03:006405141 0 W/6405141-6405141 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.0351195;DP=3987;DP4=2116,1678,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.57675e-08;MQSB=0.983159;RPB=0.919703;SGB=64.5316;VDB=0.678627;EFF=INTRON(MODIFIER||||421|LOC_Os03g12210|protein_coding|CODING|LOC_Os03g12210.1|3|1) FN1348-S.SNP.3:6405209 chr03:006405209 0 W/6405209-6405209 FN1348-S Single Base Substitution G-A INTRON HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1198-S.SNP.3:6409693 chr03:006409693 0 W/6409693-6409693 FN1198-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1097-S.SNP.3:6409702 chr03:006409702 0 W/6409702-6409702 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1577-S.SNP.3:6411356 chr03:006411356 0 W/6411356-6411356 FN1577-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g12220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3958-S.SNP.3:6412368 chr03:006412368 0 W/6412368-6412368 FN3958-S SNP A -> T AC=1;AN=168;BQB=0.75047;DP=2232;DP4=1165,949,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.88794e-07;MQSB=0.41001;RPB=0.845781;SGB=24.6155;VDB=0.148734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.3:6414708 chr03:006414708 0 W/6414708-6414708 FN2597-S SNP G -> A AC=2;AN=198;BQB=0.795377;DP=4294;DP4=1827,1897,30,35;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.01917e-27;MQSB=0.979665;RPB=0.542124;SGB=-82.8115;VDB=0.522299;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.3:6415491 chr03:006415491 0 W/6415491-6415491 FN1050-S Single Base Substitution C-T INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1754-S.SNP.3:6431764 chr03:006431764 0 W/6431764-6431764 FN1754-S SNP A -> T AC=1;AN=188;BQB=0.00854209;DP=2972;DP4=1476,1422,13,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000336474;MQB=2.18106e-07;MQSB=0.880491;RPB=0.895773;SGB=-390.6;VDB=0.858394;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.3:6432302 chr03:006432302 0 W/6432302-6432302 FN2383 SNP A -> G AC=1;AN=192;BQB=0.67148;DP=4613;DP4=2391,1921,11,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.10848e-07;MQSB=0.240619;RPB=0.336819;SGB=39.78;VDB=0.76967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3658-S.SNP.3:6435319 chr03:006435319 0 W/6435319-6435319 FN3658-S SNP G -> A AC=2;AN=190;BQB=0.920321;DP=2733;DP4=1362,1250,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.55193e-16;MQSB=0.671867;RPB=0.816059;SGB=75.1932;VDB=0.162428;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T96|675|LOC_Os03g12250|protein_coding|CODING|LOC_Os03g12250.1|1|1) FN3658-S.SNP.3:6435320 chr03:006435320 0 W/6435320-6435320 FN3658-S SNP C -> T AC=2;AN=190;BQB=0.873751;DP=2730;DP4=1366,1246,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.37829e-14;MQSB=0.699537;RPB=0.784252;SGB=94.6341;VDB=0.357894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L97F|675|LOC_Os03g12250|protein_coding|CODING|LOC_Os03g12250.1|1|1) FN2698-S.SNP.3:6442551 chr03:006442551 0 W/6442551-6442551 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.940624;DP=3770;DP4=1163,2311,12,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.92491e-08;MQSB=0.625287;RPB=0.65601;SGB=79.9264;VDB=0.187078;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.3:6447817 chr03:006447817 0 W/6447817-6447817 FN534-S Single Base Substitution G-T INTERGENIC HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1395-S.SNP.3:6456086 chr03:006456086 0 W/6456086-6456086 FN1395-S Single Base Substitution A-G INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN3399-S.SNP.3:6460637 chr03:006460637 0 W/6460637-6460637 FN3399-S SNP T -> A AC=1;AN=184;BQB=0.979416;DP=2588;DP4=1252,1240,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.27758e-07;MQSB=0.971296;RPB=0.893587;SGB=25.1826;VDB=0.656326;EFF=INTRON(MODIFIER||||357|LOC_Os03g12290|protein_coding|CODING|LOC_Os03g12290.1|4|1) FN-362.SNP.3:6460815 chr03:006460815 0 W/6460815-6460815 FN-362 Single Base Substitution G-A INTRON HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2408.SNP.3:6460816 chr03:006460816 0 W/6460816-6460816 FN2408 SNP G -> A AC=1;AN=200;BQB=0.792787;DP=5079;DP4=2446,2393,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93269e-12;MQSB=0.960886;RPB=0.859736;SGB=81.8956;VDB=0.315812;EFF=INTRON(MODIFIER||||357|LOC_Os03g12290|protein_coding|CODING|LOC_Os03g12290.1|4|1) FN2386.SNP.3:6464149 chr03:006464149 0 W/6464149-6464149 FN2386 SNP T -> C AC=1;AN=192;BQB=0.942836;DP=4489;DP4=1838,2395,22,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.43441e-21;MQSB=0.995925;RPB=0.0623737;SGB=87.8939;VDB=0.359852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.3:6465226 chr03:006465226 0 W/6465226-6465226 FN2163-S SNP A -> G AC=1;AN=168;BQB=0.759453;DP=3618;DP4=1774,1805,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.35978e-11;MQSB=0.953065;RPB=0.595123;SGB=-40.6433;VDB=0.000214995;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.3:6469574 chr03:006469574 0 W/6469574-6469574 FN4072-S SNP G -> A AC=2;AN=182;BQB=0.987936;DP=2296;DP4=1510,716,12,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.91036e-09;MQSB=0.992771;RPB=0.99458;SGB=66.6657;VDB=0.345082;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S650|711|LOC_Os03g12300|protein_coding|CODING|LOC_Os03g12300.1|19|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S468|529|LOC_Os03g12300|protein_coding|CODING|LOC_Os03g12300.2|13|1) FN322-S.SNP.3:6470903 chr03:006470903 0 W/6470903-6470903 FN322-S Single Base Substitution C-T INTRON HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2687-S.SNP.3:6473224 chr03:006473224 0 W/6473224-6473224 FN2687-S SNP T -> C AC=1;AN=200;BQB=0.994684;DP=4742;DP4=2044,2364,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.092e-05;MQSB=0.998669;RPB=0.552693;SGB=-3.35138;VDB=0.662672;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A388|711|LOC_Os03g12300|protein_coding|CODING|LOC_Os03g12300.1|13|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A206|529|LOC_Os03g12300|protein_coding|CODING|LOC_Os03g12300.2|7|1) FN1356-S.SNP.3:6487413 chr03:006487413 0 W/6487413-6487413 FN1356-S Single Base Substitution G-A INTRON HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1424-S.SNP.3:6493244 chr03:006493244 0 W/6493244-6493244 FN1424-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN2198-S.SNP.3:6499594 chr03:006499594 0 W/6499594-6499594 FN2198-S SNP G -> A AC=1;AN=190;BQB=0.999403;DP=4985;DP4=2879,1757,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200602;MQB=4.4107e-07;MQSB=0.00694534;RPB=0.969258;SGB=23.6597;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.3:6500508 chr03:006500508 0 W/6500508-6500508 W246-5-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2334.SNP.3:6504942 chr03:006504942 0 W/6504942-6504942 FN2334 SNP T -> A AC=1;AN=192;BQB=0.892304;DP=4740;DP4=2251,2167,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.58034e-11;MQSB=0.945071;RPB=0.956178;SGB=-11.9469;VDB=0.0426821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1433-S.SNP.3:6506478 chr03:006506478 0 W/6506478-6506478 FN1433-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN-162.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN-162 Single Base Substitution G-A INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1228-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN1228-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2177-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN2177-S SNP G -> A AC=2;AN=168;BQB=0.412074;DP=2208;DP4=709,1454,2,20;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.98717e-10;MQSB=1.03563e-05;RPB=0.581977;SGB=92.0501;VDB=0.0539028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN2475 SNP G -> A AC=1;AN=200;BQB=0.999865;DP=4058;DP4=1740,2086,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85192e-11;MQSB=0.888323;RPB=0.918254;SGB=86.5007;VDB=0.467764;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN3360-S SNP G -> A AC=2;AN=182;BQB=0.997581;DP=2847;DP4=1283,1477,17,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.1267e-15;MQSB=0.412378;RPB=0.801214;SGB=99.14;VDB=0.944611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN3567-S SNP G -> A AC=1;AN=188;BQB=0.988004;DP=2449;DP4=1046,1338,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5535e-09;MQSB=0.330215;RPB=0.368517;SGB=71.6954;VDB=0.739245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN3725-S SNP G -> A AC=2;AN=190;BQB=0.830477;DP=2284;DP4=984,1210,17,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43728e-13;MQSB=0.467008;RPB=0.086574;SGB=148.486;VDB=0.646472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN3871-S SNP G -> A AC=2;AN=158;BQB=0.984245;DP=2033;DP4=901,1050,9,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.13607e-07;MQSB=0.43138;RPB=0.959733;SGB=55.806;VDB=0.440098;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.817306;DP=2085;DP4=933,1093,10,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.12801e-11;MQSB=0.350275;RPB=0.690309;SGB=83.4133;VDB=0.621556;EFF=INTERGENIC(MODIFIER||||||||||1) FN_846-8-1.SNP.3:6506541 chr03:006506541 0 W/6506541-6506541 FN_846-8-1 Single Base Substitution G-A Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN3382-S.SNP.3:6509470 chr03:006509470 0 W/6509470-6509470 FN3382-S SNP G -> T AC=1;AN=182;BQB=0.846688;DP=3223;DP4=1411,1684,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.70034e-10;MQSB=0.996711;RPB=0.708478;SGB=35.884;VDB=0.25877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.3:6522078 chr03:006522078 0 W/6522078-6522078 FN3596-S SNP G -> A AC=1;AN=188;BQB=0.884755;DP=3412;DP4=1586,1746,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.16489e-09;MQSB=0.927037;RPB=0.971978;SGB=58.0655;VDB=0.891624;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D122|860|LOC_Os03g12360|protein_coding|CODING|LOC_Os03g12360.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D122|860|LOC_Os03g12360|protein_coding|CODING|LOC_Os03g12360.2|2|1) FN973-S.SNP.3:6524068 chr03:006524068 0 W/6524068-6524068 FN973-S Single Base Substitution T-C INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3859-S.SNP.3:6532126 chr03:006532126 0 W/6532126-6532126 FN3859-S SNP A -> C AC=1;AN=158;BQB=0.983055;DP=2084;DP4=941,1052,4,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000735948;MQSB=0.00912561;RPB=0.721156;SGB=20.8534;VDB=0.210772;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.3:6534292 chr03:006534292 0 W/6534292-6534292 FN-215 Single Base Substitution C-A INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN488-S.SNP.3:6534502 chr03:006534502 0 W/6534502-6534502 FN488-S Single Base Substitution T-C INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3650-S.SNP.3:6547041 chr03:006547041 0 W/6547041-6547041 FN3650-S SNP G -> A AC=1;AN=188;BQB=0.464858;DP=951;DP4=394,456,3,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00315457;MQB=0.04255;MQSB=0.0172174;RPB=0.619102;SGB=21.7749;VDB=0.489658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.3:6548411 chr03:006548411 0 W/6548411-6548411 FN2609-S SNP C -> A AC=2;AN=198;BQB=0.951594;DP=3376;DP4=1830,1329,20,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.71522e-13;MQSB=0.672341;RPB=0.917012;SGB=141.451;VDB=0.956604;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.3:6552299 chr03:006552299 0 W/6552299-6552299 FN-64 Single Base Substitution C-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN2701-S.SNP.3:6552299 chr03:006552299 0 W/6552299-6552299 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.123712;DP=4420;DP4=1950,2184,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91174e-07;MQSB=0.759263;RPB=0.244429;SGB=45.0543;VDB=0.124732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.3:6558954 chr03:006558954 0 W/6558954-6558954 FN1221-S Single Base Substitution T-A INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1221-S.SNP.3:6558955 chr03:006558955 0 W/6558955-6558955 FN1221-S Single Base Substitution C-T INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2169-S.SNP.3:6560337 chr03:006560337 0 W/6560337-6560337 FN2169-S SNP T -> C AC=1;AN=168;BQB=0.782807;DP=4027;DP4=2015,1978,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.32717e-06;MQSB=0.940664;RPB=0.844652;SGB=7.05233;VDB=0.370294;EFF=INTRON(MODIFIER||||469|LOC_Os03g12414|protein_coding|CODING|LOC_Os03g12414.1|2|1),INTRON(MODIFIER||||469|LOC_Os03g12414|protein_coding|CODING|LOC_Os03g12414.2|2|1) FN549-S.SNP.3:6571185 chr03:006571185 0 W/6571185-6571185 FN549-S Single Base Substitution G-A INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. 701-1.SNP.3:6573064 chr03:006573064 0 W/6573064-6573064 701-1 Single Base Substitution G-C INTERGENIC Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. 701-1.SNP.3:6573065 chr03:006573065 0 W/6573065-6573065 701-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN-290.SNP.3:6578024 chr03:006578024 0 W/6578024-6578024 FN-290 Single Base Substitution A-G INTRON HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1754-S.SNP.3:6583205 chr03:006583205 0 W/6583205-6583205 FN1754-S SNP T -> C AC=1;AN=188;BQB=0.95854;DP=3525;DP4=1428,2067,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.13326e-08;MQSB=0.98354;RPB=0.68673;SGB=11.7114;VDB=0.614437;EFF=INTRON(MODIFIER||||689|LOC_Os03g12460|protein_coding|CODING|LOC_Os03g12460.1|4|1) FN2182-S.SNP.3:6591990 chr03:006591990 0 W/6591990-6591990 FN2182-S SNP C -> G AC=1;AN=190;BQB=0.852951;DP=4927;DP4=2496,2119,21,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51052e-15;MQSB=0.996324;RPB=0.999451;SGB=-7.68321;VDB=0.652082;EFF=INTRON(MODIFIER||||704|LOC_Os03g12470|protein_coding|CODING|LOC_Os03g12470.1|2|1) FN2290.SNP.3:6593237 chr03:006593237 0 W/6593237-6593237 FN2290 SNP T -> C AC=1;AN=192;BQB=0.995035;DP=4780;DP4=2063,2084,4,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.35208e-08;MQSB=0.743476;RPB=0.901105;SGB=23.7852;VDB=0.537108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L484P|704|LOC_Os03g12470|protein_coding|CODING|LOC_Os03g12470.1|3|1) FN1704-S.SNP.3:6606580 chr03:006606580 0 W/6606580-6606580 FN1704-S SNP T -> G AC=2;AN=188;BQB=0.00145084;DP=3116;DP4=2191,871,31,5;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00802311;MQB=2.38921e-05;MQSB=1.0749e-08;RPB=0.188438;SGB=-409.513;VDB=0.0600691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.3:6612176 chr03:006612176 0 W/6612176-6612176 FN1112-S Single Base Substitution T-A INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1339-S.SNP.3:6619964 chr03:006619964 0 W/6619964-6619964 FN1339-S Single Base Substitution C-G INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN4311-S.SNP.3:6620695 chr03:006620695 0 W/6620695-6620695 FN4311-S SNP C -> T AC=2;AN=170;BQB=0.981532;DP=2555;DP4=1190,1302,10,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000782779;MQB=1.16354e-14;MQSB=0.318806;RPB=0.912267;SGB=127.84;VDB=0.280359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.3:6623522 chr03:006623522 0 W/6623522-6623522 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.992907;DP=3739;DP4=1731,1922,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.31472e-06;MQSB=0.790811;RPB=0.991003;SGB=44.2207;VDB=0.280152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.3:6626906 chr03:006626906 0 W/6626906-6626906 FN-65 Single Base Substitution C-T INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN2685-S.SNP.3:6629974 chr03:006629974 0 W/6629974-6629974 FN2685-S SNP G -> A AC=2;AN=200;BQB=0.895784;DP=5113;DP4=2488,2312,24,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81371e-26;MQSB=0.994403;RPB=0.828855;SGB=159.24;VDB=0.880058;EFF=UTR_3_PRIME(MODIFIER||282||364|LOC_Os03g12520|protein_coding|CODING|LOC_Os03g12520.1|8|1) FN542-S.SNP.3:6634388 chr03:006634388 0 W/6634388-6634388 FN542-S Single Base Substitution A-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN553-S.SNP.3:6635995 chr03:006635995 0 W/6635995-6635995 FN553-S Single Base Substitution A-G INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-85.SNP.3:6643886 chr03:006643886 0 W/6643886-6643886 FN-85 Single Base Substitution C-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2201-S.SNP.3:6662280 chr03:006662280 0 W/6662280-6662280 FN2201-S SNP A -> G AC=1;AN=190;BQB=0.947861;DP=5025;DP4=2501,2171,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03249e-13;MQSB=0.909303;RPB=0.668279;SGB=75.1932;VDB=0.599375;EFF=INTRON(MODIFIER||||1787|LOC_Os03g12570|protein_coding|CODING|LOC_Os03g12570.1|15|1) FN797-S.SNP.3:6668773 chr03:006668773 0 W/6668773-6668773 FN797-S Single Base Substitution T-A INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2351.SNP.3:6669619 chr03:006669619 0 W/6669619-6669619 FN2351 SNP G -> A AC=1;AN=192;BQB=0.892232;DP=4335;DP4=1928,2222,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09072e-14;MQSB=0.88868;RPB=0.311523;SGB=78.9878;VDB=0.359913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.3:6675326 chr03:006675326 0 W/6675326-6675326 FN3512-S SNP G -> A AC=2;AN=188;BQB=0.996911;DP=2897;DP4=1575,1221,11,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.52805e-09;MQSB=0.00349852;RPB=0.122188;SGB=94.4119;VDB=0.0244198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R82Q|129|LOC_Os03g12580|protein_coding|CODING|LOC_Os03g12580.1|2|1) FN229-S.SNP.3:6687986 chr03:006687986 0 W/6687986-6687986 FN229-S Single Base Substitution C-A INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN229-S.SNP.3:6687991 chr03:006687991 0 W/6687991-6687991 FN229-S Single Base Substitution C-T INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN477-S.SNP.3:6703116 chr03:006703116 0 W/6703116-6703116 FN477-S Single Base Substitution T-C INTRON HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN477-S.SNP.3:6703117 chr03:006703117 0 W/6703117-6703117 FN477-S Single Base Substitution A-T INTRON HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3446-S.SNP.3:6710633 chr03:006710633 0 W/6710633-6710633 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.881118;DP=3292;DP4=1399,1753,2,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23794e-09;MQSB=0.872167;RPB=0.382808;SGB=42.7914;VDB=0.43267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.3:6713200 chr03:006713200 0 W/6713200-6713200 FN1481-S Single Base Substitution T-C INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3389-S.SNP.3:6715595 chr03:006715595 0 W/6715595-6715595 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.375398;DP=2953;DP4=1537,1306,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01328e-05;MQSB=0.854227;RPB=0.910126;SGB=10.6662;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.3:6725096 chr03:006725096 0 W/6725096-6725096 FN501-S Single Base Substitution G-T INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN354-S.SNP.3:6728279 chr03:006728279 0 W/6728279-6728279 FN354-S Single Base Substitution T-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN883-S.SNP.3:6729210 chr03:006729210 0 W/6729210-6729210 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN-85.SNP.3:6732395 chr03:006732395 0 W/6732395-6732395 FN-85 Single Base Substitution A-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN527-S.SNP.3:6755152 chr03:006755152 0 W/6755152-6755152 FN527-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g12670 expressed protein SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3824-S.SNP.3:6755520 chr03:006755520 0 W/6755520-6755520 FN3824-S SNP A -> G AC=1;AN=190;BQB=0.989271;DP=2702;DP4=1244,1306,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.26178e-07;MQSB=0.990378;RPB=0.977574;SGB=49.0954;VDB=0.72942;EFF=UTR_3_PRIME(MODIFIER||255||75|LOC_Os03g12670|protein_coding|CODING|LOC_Os03g12670.2|2|1),INTRON(MODIFIER||||77|LOC_Os03g12670|protein_coding|CODING|LOC_Os03g12670.1|2|1),INTRON(MODIFIER||||73|LOC_Os03g12670|protein_coding|CODING|LOC_Os03g12670.3|2|1) FN2432.SNP.3:6757136 chr03:006757136 0 W/6757136-6757136 FN2432 SNP C -> A AC=2;AN=200;BQB=0.66415;DP=4587;DP4=1919,2379,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.92974e-18;MQSB=0.882832;RPB=0.148116;SGB=101.557;VDB=0.0537381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.3:6758315 chr03:006758315 0 W/6758315-6758315 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.560485;DP=4902;DP4=2572,2045,10,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=3.12834e-09;MQSB=0.507236;RPB=0.923013;SGB=81.8956;VDB=0.0854589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.3:6759847 chr03:006759847 0 W/6759847-6759847 FN2439 SNP A -> T AC=2;AN=200;BQB=0.179768;DP=4660;DP4=2379,1992,14,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.35889e-15;MQSB=0.991973;RPB=0.897655;SGB=-7.6637;VDB=0.596786;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.3:6762038 chr03:006762038 0 W/6762038-6762038 FN1046-S Single Base Substitution A-G INTERGENIC HOMO SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1280-S.SNP.3:6763361 chr03:006763361 0 W/6763361-6763361 FN1280-S Single Base Substitution G-A INTRON HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1523-S.SNP.3:6763720 chr03:006763720 0 W/6763720-6763720 FN1523-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os03g12680 protein kinase, putative, expressed SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1122-S.SNP.3:6764276 chr03:006764276 0 W/6764276-6764276 FN1122-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g12680 protein kinase, putative, expressed SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1380-S.SNP.3:6771684 chr03:006771684 0 W/6771684-6771684 FN1380-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2308.SNP.3:6781105 chr03:006781105 0 W/6781105-6781105 FN2308 SNP C -> A AC=1;AN=192;BQB=0.228217;DP=5309;DP4=2462,2469,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.69711e-12;MQSB=0.327269;RPB=0.9979;SGB=-7.43215;VDB=0.689156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.3:6781707 chr03:006781707 0 W/6781707-6781707 FN2160-S SNP A -> G AC=1;AN=168;BQB=0.0406591;DP=4248;DP4=2316,1886,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00127933;MQSB=3.94716e-05;RPB=0.450185;SGB=-36.659;VDB=0.723549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.3:6784908 chr03:006784908 0 W/6784908-6784908 FN2289 SNP A -> G AC=1;AN=192;BQB=0.981137;DP=5130;DP4=2372,2504,10,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.58635e-18;MQSB=0.813355;RPB=0.973627;SGB=69.9435;VDB=0.68602;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R98|166|LOC_Os03g12710|protein_coding|CODING|LOC_Os03g12710.1|6|1) FN-168.SNP.3:6785579 chr03:006785579 0 W/6785579-6785579 FN-168 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN-174.SNP.3:6795013 chr03:006795013 0 W/6795013-6795013 FN-174 Single Base Substitution C-A INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2546-S.SNP.3:6797865 chr03:006797865 0 W/6797865-6797865 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.871756;DP=3658;DP4=1810,1648,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.26675e-06;MQSB=0.842943;RPB=0.226155;SGB=-68.9864;VDB=0.659814;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.3:6799083 chr03:006799083 0 W/6799083-6799083 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3717-S.SNP.3:6802114 chr03:006802114 0 W/6802114-6802114 FN3717-S SNP A -> C AC=2;AN=190;BQB=0.950071;DP=2491;DP4=1241,1140,4,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.43682e-08;MQSB=0.483912;RPB=0.963848;SGB=36.1006;VDB=0.0573816;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.3:6805782 chr03:006805782 0 W/6805782-6805782 FN1675-S SNP C -> T AC=2;AN=188;BQB=0.0164988;DP=2002;DP4=806,1151,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.80354e-07;MQSB=0.872852;RPB=0.595437;SGB=13.2547;VDB=0.16469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G844D|1007|LOC_Os03g12730|protein_coding|CODING|LOC_Os03g12730.1|1|1) FN1657-S.SNP.3:6806510 chr03:006806510 0 W/6806510-6806510 FN1657-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3600-S.SNP.3:6809566 chr03:006809566 0 W/6809566-6809566 FN3600-S SNP G -> A AC=1;AN=190;BQB=0.975941;DP=2828;DP4=1412,1247,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28738e-08;MQSB=0.404378;RPB=0.833455;SGB=-12.1142;VDB=0.515563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.3:6811747 chr03:006811747 0 W/6811747-6811747 FN1423-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. W500-4-7-1.SNP.3:6817945 chr03:006817945 0 W/6817945-6817945 W500-4-7-1 Single Base Substitution G-T INTRON HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN3486-S.SNP.3:6828208 chr03:006828208 0 W/6828208-6828208 FN3486-S SNP G -> T AC=1;AN=184;BQB=0.997767;DP=2796;DP4=1317,1389,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82039e-11;MQSB=0.959985;RPB=0.792937;SGB=80.3949;VDB=0.485585;EFF=INTRON(MODIFIER||||322|LOC_Os03g12760|protein_coding|CODING|LOC_Os03g12760.1|6|1) FN_N1-151-7.SNP.3:6830077 chr03:006830077 0 W/6830077-6830077 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN563-S.SNP.3:6843735 chr03:006843735 0 W/6843735-6843735 FN563-S Single Base Substitution G-A INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN563-S.SNP.3:6843736 chr03:006843736 0 W/6843736-6843736 FN563-S Single Base Substitution C-A INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3632-S.SNP.3:6848612 chr03:006848612 0 W/6848612-6848612 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.924073;DP=2737;DP4=1270,1366,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.60058e-08;MQSB=0.863613;RPB=0.894421;SGB=67.3108;VDB=0.71822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.3:6850469 chr03:006850469 0 W/6850469-6850469 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.630652;DP=3604;DP4=1637,1766,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.13221e-16;MQSB=0.898337;RPB=0.997778;SGB=132.261;VDB=0.961075;EFF=INTERGENIC(MODIFIER||||||||||1) FN3365-S.SNP.3:6860041 chr03:006860041 0 W/6860041-6860041 FN3365-S SNP G -> C AC=1;AN=184;BQB=0.983633;DP=3035;DP4=1569,1359,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98905e-10;MQSB=0.827696;RPB=0.409904;SGB=46.3132;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.3:6860879 chr03:006860879 0 W/6860879-6860879 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN-313.SNP.3:6867558 chr03:006867558 0 W/6867558-6867558 FN-313 Single Base Substitution T-C INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1528-S.SNP.3:6875624 chr03:006875624 0 W/6875624-6875624 FN1528-S Single Base Substitution A-C INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1571-S.SNP.3:6877268 chr03:006877268 0 W/6877268-6877268 FN1571-S Single Base Substitution T-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-128.SNP.3:6882633 chr03:006882633 0 W/6882633-6882633 FN-128 Single Base Substitution C-G INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN1399-S.SNP.3:6889308 chr03:006889308 0 W/6889308-6889308 FN1399-S Single Base Substitution A-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN516-S.SNP.3:6898053 chr03:006898053 0 W/6898053-6898053 FN516-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN1388-S.SNP.3:6898583 chr03:006898583 0 W/6898583-6898583 FN1388-S Single Base Substitution A-G INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2704-S.SNP.3:6899654 chr03:006899654 0 W/6899654-6899654 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.334116;DP=5099;DP4=2441,2368,12,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47815e-19;MQSB=0.995412;RPB=0.135491;SGB=115.978;VDB=0.714188;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.3:6900466 chr03:006900466 0 W/6900466-6900466 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1114-S.SNP.3:6901543 chr03:006901543 0 W/6901543-6901543 FN1114-S Single Base Substitution A-G INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1301-S.SNP.3:6902277 chr03:006902277 0 W/6902277-6902277 FN1301-S Single Base Substitution T-C START_GAINED HET LOC_Os03g12840 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1287-S.SNP.3:6910565 chr03:006910565 0 W/6910565-6910565 FN1287-S Single Base Substitution G-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3418-S.SNP.3:6914702 chr03:006914702 0 W/6914702-6914702 FN3418-S SNP G -> A AC=2;AN=184;BQB=0.877842;DP=3044;DP4=1745,1168,12,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.61207e-10;MQSB=0.996199;RPB=0.614694;SGB=56.8786;VDB=0.830178;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.3:6922742 chr03:006922742 0 W/6922742-6922742 FN1517-S Single Base Substitution T-A INTERGENIC Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1383-S.SNP.3:6924057 chr03:006924057 0 W/6924057-6924057 FN1383-S Single Base Substitution C-A INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3601-S.SNP.3:6931893 chr03:006931893 0 W/6931893-6931893 FN3601-S SNP A -> T AC=2;AN=190;BQB=0.993315;DP=2162;DP4=745,1259,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.53082e-09;MQSB=0.672606;RPB=0.999497;SGB=50.3161;VDB=0.0945681;EFF=UTR_5_PRIME(MODIFIER||39||292|LOC_Os03g12860|protein_coding|CODING|LOC_Os03g12860.1|1|1) FN-240.SNP.3:6934252 chr03:006934252 0 W/6934252-6934252 FN-240 Single Base Substitution C-A INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN-145.SNP.3:6939733 chr03:006939733 0 W/6939733-6939733 FN-145 Single Base Substitution C-T INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1115-S.SNP.3:6939733 chr03:006939733 0 W/6939733-6939733 FN1115-S Single Base Substitution C-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN4182-S.SNP.3:6939733 chr03:006939733 0 W/6939733-6939733 FN4182-S SNP C -> T AC=1;AN=170;BQB=0.97344;DP=2478;DP4=1268,1132,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.88792e-07;MQSB=1;RPB=0.849328;SGB=12.556;VDB=0.739018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.3:6941240 chr03:006941240 0 W/6941240-6941240 FN-264 Single Base Substitution C-T INTRON HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN3632-S.SNP.3:6946105 chr03:006946105 0 W/6946105-6946105 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.921782;DP=2639;DP4=1286,1253,14,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57924e-10;MQSB=0.0978895;RPB=0.763948;SGB=71.8647;VDB=0.423241;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.3:6947090 chr03:006947090 0 W/6947090-6947090 FN-371 Single Base Substitution C-T INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN-118.SNP.3:6948971 chr03:006948971 0 W/6948971-6948971 FN-118 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN2128-S.SNP.3:6951231 chr03:006951231 0 W/6951231-6951231 FN2128-S SNP G -> T AC=2;AN=168;BQB=0.100482;DP=3574;DP4=1888,1619,21,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.29191e-15;MQSB=0.764888;RPB=0.99921;SGB=-139.169;VDB=0.432629;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G574|582|LOC_Os03g12900|protein_coding|CODING|LOC_Os03g12900.1|9|1),UTR_3_PRIME(MODIFIER||143||524|LOC_Os03g12900|protein_coding|CODING|LOC_Os03g12900.2|9|1),UTR_3_PRIME(MODIFIER||143||524|LOC_Os03g12900|protein_coding|CODING|LOC_Os03g12900.3|10|1),UTR_3_PRIME(MODIFIER||143||436|LOC_Os03g12900|protein_coding|CODING|LOC_Os03g12900.5|9|1),UTR_3_PRIME(MODIFIER||650||416|LOC_Os03g12890|protein_coding|CODING|LOC_Os03g12890.1|9|1),UTR_3_PRIME(MODIFIER||650||415|LOC_Os03g12890|protein_coding|CODING|LOC_Os03g12890.2|9|1),UTR_3_PRIME(MODIFIER||650||321|LOC_Os03g12890|protein_coding|CODING|LOC_Os03g12890.3|9|1),UTR_3_PRIME(MODIFIER||650||297|LOC_Os03g12890|protein_coding|CODING|LOC_Os03g12890.4|8|1),UTR_3_PRIME(MODIFIER||650||297|LOC_Os03g12890|protein_coding|CODING|LOC_Os03g12890.5|6|1) FN-35.SNP.3:6956508 chr03:006956508 0 W/6956508-6956508 FN-35 Single Base Substitution A-T INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN3804-S.SNP.3:6958175 chr03:006958175 0 W/6958175-6958175 FN3804-S SNP T -> C AC=1;AN=190;BQB=0.87292;DP=2751;DP4=1363,1266,14,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.39757e-08;MQSB=0.978638;RPB=0.618666;SGB=7.21887;VDB=0.782144;EFF=INTRON(MODIFIER||||613|LOC_Os03g12910|protein_coding|CODING|LOC_Os03g12910.1|7|1),INTRON(MODIFIER||||587|LOC_Os03g12910|protein_coding|CODING|LOC_Os03g12910.2|7|1) FN898-S.SNP.3:6959011 chr03:006959011 0 W/6959011-6959011 FN898-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g12910 squalene monooxygenase, putative, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1321-S.SNP.3:6961604 chr03:006961604 0 W/6961604-6961604 FN1321-S Single Base Substitution T-A INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2399.SNP.3:6971399 chr03:006971399 0 W/6971399-6971399 FN2399 SNP C -> A AC=2;AN=200;BQB=0.99175;DP=3327;DP4=1342,1682,12,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.82695e-14;MQSB=0.344018;RPB=0.307546;SGB=114.132;VDB=0.454669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.3:6971928 chr03:006971928 0 W/6971928-6971928 FN3476-S SNP T -> A AC=2;AN=184;BQB=0.504418;DP=2771;DP4=1211,1435,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.71992e-11;MQSB=0.903543;RPB=0.730503;SGB=78.0093;VDB=0.543568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.3:6978587 chr03:006978587 0 W/6978587-6978587 FN3846-S SNP C -> A AC=1;AN=190;BQB=0.777863;DP=2372;DP4=1128,1155,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000255711;MQSB=0.96685;RPB=0.166497;SGB=21.7749;VDB=0.381141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.3:6982178 chr03:006982178 0 W/6982178-6982178 FN3869-S SNP T -> A AC=2;AN=158;BQB=0.999895;DP=2522;DP4=1087,1216,23,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.93229e-18;MQSB=0.594063;RPB=0.968151;SGB=75.9465;VDB=0.180489;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K575*|810|LOC_Os03g12940|protein_coding|CODING|LOC_Os03g12940.1|6|1),STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K575*|809|LOC_Os03g12940|protein_coding|CODING|LOC_Os03g12940.2|6|1);LOF=(LOC_Os03g12940|LOC_Os03g12940|3|0.67);NMD=(LOC_Os03g12940|LOC_Os03g12940|3|0.67) FN4158-S.SNP.3:6986336 chr03:006986336 0 W/6986336-6986336 FN4158-S SNP C -> T AC=1;AN=170;BQB=0.940172;DP=2471;DP4=1279,1070,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.10946e-07;MQSB=0.781865;RPB=0.849671;SGB=27.9928;VDB=0.843545;EFF=INTRON(MODIFIER||||810|LOC_Os03g12940|protein_coding|CODING|LOC_Os03g12940.1|2|1),INTRON(MODIFIER||||809|LOC_Os03g12940|protein_coding|CODING|LOC_Os03g12940.2|2|1) FN3310-S.SNP.3:6998592 chr03:006998592 0 W/6998592-6998592 FN3310-S SNP G -> C AC=1;AN=184;BQB=0.810872;DP=2999;DP4=1265,1675,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.76757e-08;MQSB=0.998118;RPB=0.702675;SGB=57.786;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.3:7005580 chr03:007005580 0 W/7005580-7005580 W252-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN585-S.SNP.3:7020457 chr03:007020457 0 W/7020457-7020457 FN585-S Single Base Substitution G-T INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN2553-S.SNP.3:7020476 chr03:007020476 0 W/7020476-7020476 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.610162;DP=4383;DP4=1918,2229,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000228154;MQB=4.98806e-07;MQSB=0.675868;RPB=0.87089;SGB=-13.8358;VDB=0.913921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.3:7034572 chr03:007034572 0 W/7034572-7034572 FN1735-S SNP G -> A AC=2;AN=188;BQB=0.341664;DP=1870;DP4=1109,683,16,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.19166e-08;MQSB=0.990889;RPB=0.610879;SGB=-12.2833;VDB=0.767353;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E58|253|LOC_Os03g13020|protein_coding|CODING|LOC_Os03g13020.1|1|1) FN2479.SNP.3:7035662 chr03:007035662 0 W/7035662-7035662 FN2479 SNP G -> A AC=1;AN=200;BQB=0.37313;DP=5390;DP4=2737,2216,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51886e-08;MQSB=0.751824;RPB=0.997724;SGB=36.6644;VDB=0.974266;EFF=INTRON(MODIFIER||||253|LOC_Os03g13020|protein_coding|CODING|LOC_Os03g13020.1|1|1) FN509-S.SNP.3:7038444 chr03:007038444 0 W/7038444-7038444 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN509-S.SNP.3:7038445 chr03:007038445 0 W/7038445-7038445 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3893-S.SNP.3:7038568 chr03:007038568 0 W/7038568-7038568 FN3893-S SNP T -> C AC=1;AN=158;BQB=0.940028;DP=2513;DP4=1170,1254,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000397931;MQB=9.49121e-07;MQSB=0.908371;RPB=0.508988;SGB=38.3284;VDB=0.253951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.3:7038600 chr03:007038600 0 W/7038600-7038600 FN2358 SNP G -> A AC=2;AN=192;BQB=0.0629479;DP=5212;DP4=2442,2425,16,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.56496e-20;MQSB=0.206518;RPB=0.329335;SGB=-44.9121;VDB=0.389515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.3:7052067 chr03:007052067 0 W/7052067-7052067 FN-104 Single Base Substitution T-G INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1624-S.SNP.3:7061228 chr03:007061228 0 W/7061228-7061228 FN1624-S Single Base Substitution G-A INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1485-S.SNP.3:7061301 chr03:007061301 0 W/7061301-7061301 FN1485-S Single Base Substitution C-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN742-S.SNP.3:7062212 chr03:007062212 0 W/7062212-7062212 FN742-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g13050 E2F-related protein, putative, expressed SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2767-S.SNP.3:7066102 chr03:007066102 0 W/7066102-7066102 FN2767-S SNP C -> A AC=1;AN=198;BQB=0.966725;DP=3633;DP4=1863,1555,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.29797e-11;MQSB=0.770265;RPB=0.258319;SGB=61.7198;VDB=0.826289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:7067518 chr03:007067518 0 W/7067518-7067518 FN2752-S SNP T -> C AC=1;AN=200;BQB=0.45513;DP=4716;DP4=2219,2060,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94901e-14;MQSB=0.957071;RPB=0.679901;SGB=-72.2589;VDB=0.539452;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.3:7104873 chr03:007104873 0 W/7104873-7104873 FN-332 Single Base Substitution G-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-54.SNP.3:7115291 chr03:007115291 0 W/7115291-7115291 FN-54 Single Base Substitution T-G INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2574-S.SNP.3:7117815 chr03:007117815 0 W/7117815-7117815 FN2574-S SNP C -> T AC=2;AN=198;BQB=0.9318;DP=3982;DP4=2059,1701,7,3;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.00318e-05;MQSB=0.166747;RPB=0.996287;SGB=40.3588;VDB=0.850504;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.3:7120694 chr03:007120694 0 W/7120694-7120694 FN682-S Single Base Substitution G-T INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN3832-S.SNP.3:7120869 chr03:007120869 0 W/7120869-7120869 FN3832-S SNP A -> C AC=2;AN=190;BQB=0.99877;DP=2384;DP4=816,1272,18,12;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.0809564;MQB=0.983644;MQSB=0.00121954;RPB=0.988785;SGB=-7.12933;VDB=0.714666;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.3:7125261 chr03:007125261 0 W/7125261-7125261 FN484-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g13200 peroxidase precursor, putative, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN484-S.SNP.3:7125262 chr03:007125262 0 W/7125262-7125262 FN484-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g13200 peroxidase precursor, putative, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN499-S.SNP.3:7127327 chr03:007127327 0 W/7127327-7127327 FN499-S Single Base Substitution G-A INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-166.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN-166 Single Base Substitution C-T INTRON HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-362.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN-362 Single Base Substitution C-T INTRON HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1396-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN1396-S Single Base Substitution C-T INTRON HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1561-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN1561-S Single Base Substitution C-T INTRON Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1707-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.505838;DP=3389;DP4=1603,1725,19,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.41418e-16;MQSB=0.795658;RPB=0.976934;SGB=-44.2151;VDB=0.577493;EFF=INTRON(MODIFIER||||335|LOC_Os03g13210|protein_coding|CODING|LOC_Os03g13210.1|1|1) FN3554-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.675486;DP=3613;DP4=1993,1521,22,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.8631e-19;MQSB=0.962639;RPB=0.67065;SGB=148.931;VDB=0.4353;EFF=INTRON(MODIFIER||||335|LOC_Os03g13210|protein_coding|CODING|LOC_Os03g13210.1|1|1) FN3705-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN3705-S SNP C -> T AC=2;AN=190;BQB=0.90589;DP=3341;DP4=1728,1473,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.02234e-20;MQSB=0.88713;RPB=0.86006;SGB=140.173;VDB=0.161261;EFF=INTRON(MODIFIER||||335|LOC_Os03g13210|protein_coding|CODING|LOC_Os03g13210.1|1|1) FN3852-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.530169;DP=2977;DP4=1546,1311,21,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.60923e-14;MQSB=0.681977;RPB=0.780547;SGB=130.087;VDB=0.623954;EFF=INTRON(MODIFIER||||335|LOC_Os03g13210|protein_coding|CODING|LOC_Os03g13210.1|1|1) FN391-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN391-S Single Base Substitution C-T INTRON HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4078-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN4078-S SNP C -> T AC=2;AN=182;BQB=0.999105;DP=3812;DP4=1893,1818,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.15067e-17;MQSB=0.937098;RPB=0.516108;SGB=116.285;VDB=0.239324;EFF=INTRON(MODIFIER||||335|LOC_Os03g13210|protein_coding|CODING|LOC_Os03g13210.1|1|1) FN735-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN735-S Single Base Substitution C-T INTRON HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN846-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN846-S Single Base Substitution C-T INTRON HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN957-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN957-S Single Base Substitution C-T INTRON HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN985-S.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN985-S Single Base Substitution C-T INTRON HOMO SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN_822-5-1.SNP.3:7129959 chr03:007129959 0 W/7129959-7129959 FN_822-5-1 Single Base Substitution C-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3851-S.SNP.3:7145805 chr03:007145805 0 W/7145805-7145805 FN3851-S SNP T -> A AC=1;AN=158;BQB=0.98713;DP=2332;DP4=1152,1067,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.73239e-08;MQSB=0.981831;RPB=0.996147;SGB=64.5449;VDB=0.953799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.3:7150818 chr03:007150818 0 W/7150818-7150818 FN3457-S SNP C -> A AC=1;AN=184;BQB=0.936794;DP=2724;DP4=1422,1225,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.63103e-07;MQSB=0.999094;RPB=0.991891;SGB=39.699;VDB=0.327896;EFF=INTRON(MODIFIER||||621|LOC_Os03g13250|protein_coding|CODING|LOC_Os03g13250.1|1|1) FN3579-S.SNP.3:7171183 chr03:007171183 0 W/7171183-7171183 FN3579-S SNP T -> A AC=2;AN=188;BQB=0.956798;DP=2682;DP4=1308,1242,9,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.07637e-17;MQSB=0.997994;RPB=0.992129;SGB=117.128;VDB=0.372652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.3:7171192 chr03:007171192 0 W/7171192-7171192 FN3579-S SNP A -> G AC=2;AN=188;BQB=0.753905;DP=2655;DP4=1321,1227,9,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.03329e-17;MQSB=0.999914;RPB=0.765037;SGB=112.585;VDB=0.27062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.3:7171370 chr03:007171370 0 W/7171370-7171370 FN1212-S Single Base Substitution C-T INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3959-S.SNP.3:7173514 chr03:007173514 0 W/7173514-7173514 FN3959-S SNP A -> G AC=1;AN=168;BQB=0.956361;DP=2461;DP4=1220,1178,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000337877;MQSB=0.690221;RPB=0.914178;SGB=17.5943;VDB=0.683425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.3:7174463 chr03:007174463 0 W/7174463-7174463 FN1283-S Single Base Substitution A-G INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1411-S.SNP.3:7179091 chr03:007179091 0 W/7179091-7179091 FN1411-S Single Base Substitution T-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3364-S.SNP.3:7179528 chr03:007179528 0 W/7179528-7179528 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.937223;DP=2873;DP4=1381,1399,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91682e-06;MQSB=0.977868;RPB=0.971208;SGB=35.1773;VDB=0.149896;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.3:7195866 chr03:007195866 0 W/7195866-7195866 FN747-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3465-S.SNP.3:7196782 chr03:007196782 0 W/7196782-7196782 FN3465-S SNP G -> A AC=1;AN=184;BQB=0.782832;DP=3985;DP4=1982,1860,19,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.32162e-17;MQSB=0.973831;RPB=0.257555;SGB=109.705;VDB=0.855507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.3:7213140 chr03:007213140 0 W/7213140-7213140 FN1484-S Single Base Substitution G-A INTRON HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2611-S.SNP.3:7224489 chr03:007224489 0 W/7224489-7224489 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.373936;DP=4739;DP4=2398,2092,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.62142e-18;MQSB=0.9975;RPB=0.989785;SGB=90.7419;VDB=0.813848;EFF=INTRON(MODIFIER||||595|LOC_Os03g13380|protein_coding|CODING|LOC_Os03g13380.1|1|1) FN794-S.SNP.3:7230228 chr03:007230228 0 W/7230228-7230228 FN794-S Single Base Substitution A-T INTRON HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN-121.SNP.3:7242617 chr03:007242617 0 W/7242617-7242617 FN-121 Single Base Substitution T-A INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3484-S.SNP.3:7243690 chr03:007243690 0 W/7243690-7243690 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.9907;DP=2821;DP4=1440,1315,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36658e-05;MQSB=0.963189;RPB=0.486686;SGB=30.6558;VDB=0.431318;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.3:7245945 chr03:007245945 0 W/7245945-7245945 FN_814-7-1 Single Base Substitution G-A Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3888-S.SNP.3:7246205 chr03:007246205 0 W/7246205-7246205 FN3888-S SNP C -> T AC=2;AN=158;BQB=0.955889;DP=2336;DP4=1172,1006,20,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.99402e-15;MQSB=0.432661;RPB=0.989933;SGB=147.564;VDB=0.160474;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.3:7247117 chr03:007247117 0 W/7247117-7247117 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1670-S.SNP.3:7248609 chr03:007248609 0 W/7248609-7248609 FN1670-S SNP A -> C AC=2;AN=188;BQB=0.0153002;DP=4313;DP4=2274,1971,29,28;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.000231857;MQB=0.496293;MQSB=0.0910643;RPB=0.841143;SGB=-238.877;VDB=0.0874893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.3:7253580 chr03:007253580 0 W/7253580-7253580 FN3598-S SNP C -> T AC=1;AN=188;BQB=0.999996;DP=3397;DP4=2196,1111,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.08526e-08;MQSB=0.997711;RPB=0.961364;SGB=58.0655;VDB=0.0887393;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.3:7253616 chr03:007253616 0 W/7253616-7253616 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.0265936;DP=4206;DP4=2374,1673,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.22101e-07;MQSB=0.98139;RPB=0.81395;SGB=39.7248;VDB=0.0151263;EFF=INTERGENIC(MODIFIER||||||||||1) FN531-S.SNP.3:7254207 chr03:007254207 0 W/7254207-7254207 FN531-S Single Base Substitution T-A INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN531-S.SNP.3:7254208 chr03:007254208 0 W/7254208-7254208 FN531-S Single Base Substitution G-A INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN531-S.SNP.3:7254209 chr03:007254209 0 W/7254209-7254209 FN531-S Single Base Substitution C-A INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN2560-S.SNP.3:7255505 chr03:007255505 0 W/7255505-7255505 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.370069;DP=4118;DP4=2013,1903,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000668127;MQSB=0.997687;RPB=0.629604;SGB=26.5745;VDB=0.303719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.3:7257229 chr03:007257229 0 W/7257229-7257229 FN1369-S Single Base Substitution G-A INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN1348-S.SNP.3:7261448 chr03:007261448 0 W/7261448-7261448 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1197-S.SNP.3:7262420 chr03:007262420 0 W/7262420-7262420 FN1197-S Single Base Substitution C-T INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN4230-S.SNP.3:7262764 chr03:007262764 0 W/7262764-7262764 FN4230-S SNP A -> G AC=1;AN=170;BQB=0.9894;DP=2513;DP4=1171,1263,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00318345;MQB=2.73616e-06;MQSB=0.0510459;RPB=0.648348;SGB=56.7575;VDB=0.143676;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.3:7277624 chr03:007277624 0 W/7277624-7277624 FN-305 Single Base Substitution G-A UTR_3_PRIME HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN894-S.SNP.3:7285933 chr03:007285933 0 W/7285933-7285933 FN894-S Single Base Substitution T-G INTRON HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2108-S.SNP.3:7286017 chr03:007286017 0 W/7286017-7286017 FN2108-S SNP A -> G AC=1;AN=168;BQB=0.0792341;DP=4071;DP4=1999,2033,16,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07413e-08;MQSB=0.95776;RPB=0.37501;SGB=-13.6493;VDB=0.0834354;EFF=INTRON(MODIFIER||||155|LOC_Os03g13470|protein_coding|CODING|LOC_Os03g13470.1|2|1) FN2563-S.SNP.3:7288585 chr03:007288585 0 W/7288585-7288585 FN2563-S SNP T -> C AC=1;AN=198;BQB=0.357894;DP=4044;DP4=2047,1728,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.83293e-09;MQSB=0.956599;RPB=0.999963;SGB=9.3494;VDB=0.843592;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.3:7297144 chr03:007297144 0 W/7297144-7297144 FN4247-S SNP T -> A AC=1;AN=170;BQB=0.771419;DP=2289;DP4=1014,1104,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.68476e-09;MQSB=0.93406;RPB=0.946817;SGB=1.44716;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.3:7297478 chr03:007297478 0 W/7297478-7297478 FN3720-S SNP C -> T AC=1;AN=190;BQB=0.901047;DP=1887;DP4=891,932,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000137906;MQSB=0.524537;RPB=0.997306;SGB=26.3271;VDB=0.596338;EFF=INTRON(MODIFIER||||204|LOC_Os03g13500|protein_coding|CODING|LOC_Os03g13500.1|1|1) FN3343-S.SNP.3:7297933 chr03:007297933 0 W/7297933-7297933 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.861128;DP=2597;DP4=991,1424,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00231036;MQB=0.0183907;MQSB=0;RPB=0.0140038;SGB=35.7479;VDB=0.255981;EFF=INTRON(MODIFIER||||204|LOC_Os03g13500|protein_coding|CODING|LOC_Os03g13500.1|1|1) FN1375-S.SNP.3:7304193 chr03:007304193 0 W/7304193-7304193 FN1375-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2477.SNP.3:7306957 chr03:007306957 0 W/7306957-7306957 FN2477 SNP G -> T AC=2;AN=200;BQB=0.294096;DP=3993;DP4=1990,1762,17,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000250438;MQB=3.49444e-18;MQSB=0.878111;RPB=0.996959;SGB=155.578;VDB=0.70198;EFF=INTRON(MODIFIER||||495|LOC_Os03g13520|protein_coding|CODING|LOC_Os03g13520.1|5|1) W278-3-1.SNP.3:7314256 chr03:007314256 0 W/7314256-7314256 W278-3-1 Single Base Substitution A-C INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2500.SNP.3:7319418 chr03:007319418 0 W/7319418-7319418 FN2500 SNP G -> A AC=1;AN=200;BQB=0.986861;DP=4067;DP4=1837,1987,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68074e-09;MQSB=0.999784;RPB=0.818148;SGB=51.0851;VDB=0.768316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.3:7321207 chr03:007321207 0 W/7321207-7321207 FN1703-S SNP A -> G AC=1;AN=188;BQB=0.979233;DP=3003;DP4=1305,1673,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06144e-07;MQSB=0.934661;RPB=0.269458;SGB=35.9843;VDB=0.771836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.3:7326501 chr03:007326501 0 W/7326501-7326501 FN2275-S SNP T -> A AC=2;AN=190;BQB=0.971238;DP=5155;DP4=2271,2445,45,53;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.994057;RPB=0.989976;SGB=328.096;VDB=0.753953;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K259*|318|LOC_Os03g13550|protein_coding|CODING|LOC_Os03g13550.1|6|1) FN-223.SNP.3:7326975 chr03:007326975 0 W/7326975-7326975 FN-223 Single Base Substitution A-C INTRON HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN4224-S.SNP.3:7329775 chr03:007329775 0 W/7329775-7329775 FN4224-S SNP C -> A AC=1;AN=170;BQB=0.990224;DP=2727;DP4=1484,1167,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.94726e-09;MQSB=0.943553;RPB=0.117029;SGB=56.7575;VDB=0.390914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K646N|658|LOC_Os03g13560|protein_coding|CODING|LOC_Os03g13560.1|8|1) FN1182-S.SNP.3:7332449 chr03:007332449 0 W/7332449-7332449 FN1182-S Single Base Substitution A-G INTRON HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN75-S-S.SNP.3:7335537 chr03:007335537 0 W/7335537-7335537 FN75-S-S SNP C -> A AC=1;AN=190;BQB=0.994945;DP=3982;DP4=1832,1735,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00025113;MQB=2.75649e-07;MQSB=0.995211;RPB=0.896545;SGB=36.1006;VDB=0.169243;EFF=INTERGENIC(MODIFIER||||||||||1) FN-100.SNP.3:7338024 chr03:007338024 0 W/7338024-7338024 FN-100 Single Base Substitution T-C INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. W138-2-1.SNP.3:7338112 chr03:007338112 0 W/7338112-7338112 W138-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN794-S.SNP.3:7339375 chr03:007339375 0 W/7339375-7339375 FN794-S Single Base Substitution A-G INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN2480.SNP.3:7344873 chr03:007344873 0 W/7344873-7344873 FN2480 SNP A -> T AC=1;AN=200;BQB=0.99416;DP=4853;DP4=2089,2321,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20413e-05;MQSB=0.834256;RPB=0.762038;SGB=16.4591;VDB=0.000413419;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.3:7373223 chr03:007373223 0 W/7373223-7373223 FN-248 Single Base Substitution C-T INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN1276-S.SNP.3:7374020 chr03:007374020 0 W/7374020-7374020 FN1276-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3667-S.SNP.3:7378880 chr03:007378880 0 W/7378880-7378880 FN3667-S SNP G -> T AC=1;AN=190;BQB=0.870154;DP=1401;DP4=741,567,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000153498;MQSB=0.887142;RPB=0.870841;SGB=26.3271;VDB=0.659036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.3:7379247 chr03:007379247 0 W/7379247-7379247 FN2536-S SNP C -> A AC=1;AN=198;BQB=0.789945;DP=3043;DP4=1513,1188,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.33409e-06;MQSB=0.886176;RPB=0.90189;SGB=58.7391;VDB=0.945639;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.3:7389994 chr03:007389994 0 W/7389994-7389994 FN3417-S SNP G -> T AC=1;AN=184;BQB=0.931951;DP=4180;DP4=1790,2014,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0550239;MQB=0.908996;MQSB=0;RPB=0.553422;SGB=44.2207;VDB=0.205276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.3:7394975 chr03:007394975 0 W/7394975-7394975 FN3464-S SNP T -> A AC=1;AN=184;BQB=0.656766;DP=3177;DP4=1338,1691,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000314762;MQB=1.67389e-05;MQSB=0.791269;RPB=0.42137;SGB=20.7533;VDB=0.439122;EFF=INTRON(MODIFIER||||667|LOC_Os03g13670|protein_coding|CODING|LOC_Os03g13670.1|2|1) FN3626-S.SNP.3:7395705 chr03:007395705 0 W/7395705-7395705 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.990907;DP=2698;DP4=1339,1249,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000370645;MQB=4.27651e-05;MQSB=0.933016;RPB=0.6875;SGB=39.9877;VDB=0.713138;EFF=INTRON(MODIFIER||||667|LOC_Os03g13670|protein_coding|CODING|LOC_Os03g13670.1|2|1) FN794-S.SNP.3:7398986 chr03:007398986 0 W/7398986-7398986 FN794-S Single Base Substitution A-G INTRON HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN_814-7-1.SNP.3:7406096 chr03:007406096 0 W/7406096-7406096 FN_814-7-1 Single Base Substitution C-T Homo LOC_Os03g13690 expressed protein SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN_814-7-1.SNP.3:7406097 chr03:007406097 0 W/7406097-7406097 FN_814-7-1 Single Base Substitution A-T Homo LOC_Os03g13690 expressed protein SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1103-S.SNP.3:7406207 chr03:007406207 0 W/7406207-7406207 FN1103-S Single Base Substitution T-C INTRON HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-241.SNP.3:7408759 chr03:007408759 0 W/7408759-7408759 FN-241 Single Base Substitution G-T INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3780-S.SNP.3:7409496 chr03:007409496 0 W/7409496-7409496 FN3780-S SNP C -> A AC=2;AN=190;BQB=0.997211;DP=2299;DP4=1352,858,8,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0130492;MQB=8.84522e-07;MQSB=0.349044;RPB=0.668767;SGB=58.2031;VDB=0.548359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.3:7409497 chr03:007409497 0 W/7409497-7409497 FN3780-S SNP T -> A AC=2;AN=190;BQB=0.814408;DP=2297;DP4=1320,795,8,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0126252;MQB=1.08004e-05;MQSB=0.151079;RPB=0.931599;SGB=58.2031;VDB=0.849606;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.3:7427741 chr03:007427741 0 W/7427741-7427741 FN4087-S SNP G -> A AC=1;AN=182;BQB=0.96089;DP=2700;DP4=1402,1247,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.20052e-05;MQSB=0.978769;RPB=0.98397;SGB=30.5793;VDB=0.888218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.3:7444389 chr03:007444389 0 W/7444389-7444389 FN3761-S SNP T -> A AC=2;AN=190;BQB=0.998792;DP=2455;DP4=1115,1232,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.54463e-11;MQSB=0.986512;RPB=0.990424;SGB=94.6341;VDB=0.428983;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.3:7446813 chr03:007446813 0 W/7446813-7446813 FN4065-S SNP T -> C AC=1;AN=168;BQB=0.988316;DP=2612;DP4=1290,1241,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83918e-06;MQSB=0.842158;RPB=0.97524;SGB=38.8805;VDB=0.73483;EFF=INTRON(MODIFIER||||129|LOC_Os03g13750|protein_coding|CODING|LOC_Os03g13750.1|4|1),INTRON(MODIFIER||||117|LOC_Os03g13750|protein_coding|CODING|LOC_Os03g13750.2|3|1) FN1114-S.SNP.3:7452832 chr03:007452832 0 W/7452832-7452832 FN1114-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1737-S.SNP.3:7456805 chr03:007456805 0 W/7456805-7456805 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.266345;DP=3374;DP4=1321,2024,5,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07839e-08;MQSB=0.982385;RPB=0.233293;SGB=38.7926;VDB=0.521084;EFF=INTRON(MODIFIER||||571|LOC_Os03g13770|protein_coding|CODING|LOC_Os03g13770.1|4|1) FN2201-S.SNP.3:7466294 chr03:007466294 0 W/7466294-7466294 FN2201-S SNP C -> A AC=1;AN=190;BQB=0.832919;DP=3893;DP4=1686,1952,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14272e-14;MQSB=0.987344;RPB=0.423919;SGB=-9.89872;VDB=0.36889;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.3:7487952 chr03:007487952 0 W/7487952-7487952 FN266-S Single Base Substitution A-G INTERGENIC HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-112.SNP.3:7488583 chr03:007488583 0 W/7488583-7488583 FN-112 Single Base Substitution T-C INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN944-S.SNP.3:7490323 chr03:007490323 0 W/7490323-7490323 FN944-S Single Base Substitution T-C INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2085-S.SNP.3:7490459 chr03:007490459 0 W/7490459-7490459 FN2085-S SNP T -> A AC=2;AN=168;BQB=0.0857369;DP=3543;DP4=1906,1584,19,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.67997e-12;MQSB=0.869377;RPB=0.955874;SGB=-228.019;VDB=0.0844173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.3:7491605 chr03:007491605 0 W/7491605-7491605 FN3400-S SNP C -> T AC=2;AN=184;BQB=0.7341;DP=3030;DP4=1686,1226,18,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.79989e-16;MQSB=0.789607;RPB=0.651354;SGB=143.7;VDB=0.815828;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.3:7503797 chr03:007503797 0 W/7503797-7503797 FN1153-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1577-S.SNP.3:7522578 chr03:007522578 0 W/7522578-7522578 FN1577-S Single Base Substitution C-T INTERGENIC Homo SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN354-S.SNP.3:7522578 chr03:007522578 0 W/7522578-7522578 FN354-S Single Base Substitution C-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3520-S.SNP.3:7524115 chr03:007524115 0 W/7524115-7524115 FN3520-S SNP T -> C AC=1;AN=188;BQB=0.962933;DP=3025;DP4=1497,1428,18,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.24358e-13;MQSB=0.986541;RPB=0.847975;SGB=89.8686;VDB=0.981242;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.3:7526727 chr03:007526727 0 W/7526727-7526727 FN4241-S SNP C -> G AC=2;AN=170;BQB=0.833445;DP=2496;DP4=1199,1196,19,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.28649e-18;MQSB=0.364304;RPB=0.474405;SGB=150.053;VDB=0.273371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:7533718 chr03:007533718 0 W/7533718-7533718 FN2752-S SNP C -> A AC=1;AN=200;BQB=0.492707;DP=4674;DP4=2139,2249,8,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00192555;MQB=0.00186872;MQSB=0.973675;RPB=0.868345;SGB=81.8956;VDB=0.212125;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R39|585|LOC_Os03g13890|protein_coding|CODING|LOC_Os03g13890.1|1|1) FN852-S.SNP.3:7537612 chr03:007537612 0 W/7537612-7537612 FN852-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g13900 retrotransposon protein, putative, unclassified, expressed SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3679-S.SNP.3:7537959 chr03:007537959 0 W/7537959-7537959 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.916292;DP=2717;DP4=1330,1292,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00993743;MQB=0.363536;MQSB=0.464745;RPB=0.470353;SGB=43.2083;VDB=0.31389;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A912|1914|LOC_Os03g13900|protein_coding|CODING|LOC_Os03g13900.1|2|1) FN-286.SNP.3:7538188 chr03:007538188 0 W/7538188-7538188 FN-286 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g13900 retrotransposon protein, putative, unclassified, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN711-S.SNP.3:7538188 chr03:007538188 0 W/7538188-7538188 FN711-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g13900 retrotransposon protein, putative, unclassified, expressed SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN_546-3-1.SNP.3:7538188 chr03:007538188 0 W/7538188-7538188 FN_546-3-1 Single Base Substitution G-A Homo LOC_Os03g13900 retrotransposon protein, putative, unclassified, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1410-S.SNP.3:7542899 chr03:007542899 0 W/7542899-7542899 FN1410-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN871-S.SNP.3:7543148 chr03:007543148 0 W/7543148-7543148 FN871-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1023-S.SNP.3:7546916 chr03:007546916 0 W/7546916-7546916 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1060-S.SNP.3:7550098 chr03:007550098 0 W/7550098-7550098 FN1060-S Single Base Substitution T-C INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1060-S.SNP.3:7550099 chr03:007550099 0 W/7550099-7550099 FN1060-S Single Base Substitution T-C INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1669-S.SNP.3:7557776 chr03:007557776 0 W/7557776-7557776 FN1669-S SNP A -> G AC=2;AN=188;BQB=0.388021;DP=3579;DP4=1766,1739,18,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.47239e-17;MQSB=0.944266;RPB=0.382014;SGB=-47.4121;VDB=0.309501;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.3:7559188 chr03:007559188 0 W/7559188-7559188 FN-214 Single Base Substitution T-A UTR_3_PRIME HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2781-S.SNP.3:7563654 chr03:007563654 0 W/7563654-7563654 FN2781-S SNP G -> A AC=2;AN=198;BQB=0.905873;DP=3970;DP4=1883,1806,18,17;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=5.32314e-16;MQSB=0.619958;RPB=0.671027;SGB=155.237;VDB=0.155116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.3:7567017 chr03:007567017 0 W/7567017-7567017 FN1129-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN863-S.SNP.3:7568065 chr03:007568065 0 W/7568065-7568065 FN863-S Single Base Substitution A-T INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1449-S.SNP.3:7569248 chr03:007569248 0 W/7569248-7569248 FN1449-S Single Base Substitution C-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN419-S.SNP.3:7569949 chr03:007569949 0 W/7569949-7569949 FN419-S Single Base Substitution T-C INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN3769-S.SNP.3:7570693 chr03:007570693 0 W/7570693-7570693 FN3769-S SNP C -> A AC=1;AN=190;BQB=0.866013;DP=3102;DP4=1609,1348,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.54187e-12;MQSB=0.976543;RPB=0.360507;SGB=38.983;VDB=0.322863;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.3:7572143 chr03:007572143 0 W/7572143-7572143 FN3399-S SNP C -> T AC=1;AN=184;BQB=0.729871;DP=2843;DP4=1432,1318,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.99276e-05;MQSB=0.947806;RPB=0.348361;SGB=28.7043;VDB=0.387541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.3:7575351 chr03:007575351 0 W/7575351-7575351 FN-286 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN1722-S.SNP.3:7579543 chr03:007579543 0 W/7579543-7579543 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.381204;DP=4026;DP4=1960,2019,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.33305e-14;MQSB=0.873585;RPB=0.572409;SGB=-6.30704;VDB=0.408572;EFF=UTR_3_PRIME(MODIFIER||524||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.1|11|1),UTR_3_PRIME(MODIFIER||524||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.2|10|1) FN2110-S.SNP.3:7580836 chr03:007580836 0 W/7580836-7580836 FN2110-S SNP T -> A AC=1;AN=168;BQB=0.414879;DP=3816;DP4=1800,1985,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.25763e-09;MQSB=0.979457;RPB=0.801906;SGB=-15.3725;VDB=0.376393;EFF=INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.1|8|1),INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.2|8|1) FN3723-S.SNP.3:7583379 chr03:007583379 0 W/7583379-7583379 FN3723-S SNP C -> A AC=2;AN=190;BQB=0.986818;DP=2607;DP4=1310,1169,20,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.04657e-15;MQSB=0.866618;RPB=0.986047;SGB=89.4087;VDB=0.983641;EFF=INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.1|2|1),INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.2|2|1) FN3864-S.SNP.3:7583379 chr03:007583379 0 W/7583379-7583379 FN3864-S SNP C -> A AC=1;AN=158;BQB=0.96342;DP=2530;DP4=1287,1138,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.84052e-11;MQSB=0.834821;RPB=0.985137;SGB=73.2838;VDB=0.911961;EFF=INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.1|2|1),INTRON(MODIFIER||||402|LOC_Os03g13970|protein_coding|CODING|LOC_Os03g13970.2|2|1) FN992-S.SNP.3:7583379 chr03:007583379 0 W/7583379-7583379 FN992-S Single Base Substitution C-A INTRON HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN2676-S.SNP.3:7603792 chr03:007603792 0 W/7603792-7603792 FN2676-S SNP T -> A AC=1;AN=200;BQB=0.917354;DP=5254;DP4=2556,2492,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19805e-13;MQSB=0.996019;RPB=0.0548304;SGB=61.9006;VDB=0.225746;EFF=INTRON(MODIFIER||||348|LOC_Os03g14020|protein_coding|CODING|LOC_Os03g14020.1|1|1),INTRON(MODIFIER||||210|LOC_Os03g14020|protein_coding|CODING|LOC_Os03g14020.2|1|1) FN2082-S.SNP.3:7615597 chr03:007615597 0 W/7615597-7615597 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.0748748;DP=3554;DP4=1633,1878,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.53402e-08;MQSB=0.998951;RPB=0.152363;SGB=-115.779;VDB=0.301623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.3:7616814 chr03:007616814 0 W/7616814-7616814 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.0872548;DP=4412;DP4=2146,1966,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000269012;MQSB=0.613358;RPB=0.998789;SGB=11.1786;VDB=0.998156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G92S|154|LOC_Os03g14040|protein_coding|CODING|LOC_Os03g14040.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G92S|154|LOC_Os03g14040|protein_coding|CODING|LOC_Os03g14040.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G92S|154|LOC_Os03g14040|protein_coding|CODING|LOC_Os03g14040.3|3|1) FN502-S.SNP.3:7617546 chr03:007617546 0 W/7617546-7617546 FN502-S Single Base Substitution C-A INTRON HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2495.SNP.3:7621562 chr03:007621562 0 W/7621562-7621562 FN2495 SNP C -> T AC=1;AN=200;BQB=0.91943;DP=4821;DP4=2169,2433,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.49099e-10;MQSB=0.791367;RPB=0.961886;SGB=29.4849;VDB=0.270624;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.3:7623578 chr03:007623578 0 W/7623578-7623578 W591-4-1 Single Base Substitution A-G INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN4300-S.SNP.3:7624115 chr03:007624115 0 W/7624115-7624115 FN4300-S SNP C -> G AC=1;AN=170;BQB=0.985584;DP=2668;DP4=1225,1324,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.56796e-08;MQSB=0.841352;RPB=0.375555;SGB=31.4354;VDB=0.720427;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.3:7630567 chr03:007630567 0 W/7630567-7630567 FN1344-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1541-S.SNP.3:7641587 chr03:007641587 0 W/7641587-7641587 FN1541-S Single Base Substitution C-T INTRON Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2185-S.SNP.3:7643284 chr03:007643284 0 W/7643284-7643284 FN2185-S SNP T -> A AC=2;AN=190;BQB=0.845628;DP=3837;DP4=1608,1700,17,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49194e-15;MQSB=0.972618;RPB=0.894659;SGB=117.84;VDB=0.590528;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.3:7659727 chr03:007659727 0 W/7659727-7659727 FN779-S Single Base Substitution A-T INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN_935-1.SNP.3:7660316 chr03:007660316 0 W/7660316-7660316 FN_935-1 Single Base Substitution T-G HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. W500-4-7-1.SNP.3:7660437 chr03:007660437 0 W/7660437-7660437 W500-4-7-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2621-S.SNP.3:7671192 chr03:007671192 0 W/7671192-7671192 FN2621-S SNP A -> T AC=1;AN=200;BQB=0.725589;DP=5053;DP4=2539,2159,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09329e-16;MQSB=0.788948;RPB=0.963995;SGB=-80.6278;VDB=0.0493441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.3:7682798 chr03:007682798 0 W/7682798-7682798 FN2753-S SNP A -> T AC=1;AN=200;BQB=0.747329;DP=4867;DP4=2272,2299,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12261e-13;MQSB=0.950896;RPB=0.758415;SGB=100.316;VDB=0.822953;EFF=UTR_5_PRIME(MODIFIER||76||314|LOC_Os03g14150|protein_coding|CODING|LOC_Os03g14150.1|1|1) FN436-S.SNP.3:7684405 chr03:007684405 0 W/7684405-7684405 FN436-S Single Base Substitution G-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN436-S.SNP.3:7684406 chr03:007684406 0 W/7684406-7684406 FN436-S Single Base Substitution C-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN436-S.SNP.3:7684407 chr03:007684407 0 W/7684407-7684407 FN436-S Single Base Substitution T-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN730-S.SNP.3:7688422 chr03:007688422 0 W/7688422-7688422 FN730-S Single Base Substitution C-T STOP_GAINED HET LOC_Os03g14170 3-ketoacyl-CoA synthase, putative, expressed SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-193.SNP.3:7695492 chr03:007695492 0 W/7695492-7695492 FN-193 Single Base Substitution C-T INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN3324-S.SNP.3:7696383 chr03:007696383 0 W/7696383-7696383 FN3324-S SNP C -> A AC=1;AN=184;BQB=0.930883;DP=3254;DP4=1505,1610,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75445e-05;MQSB=0.956099;RPB=0.681748;SGB=30.6558;VDB=0.804867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.3:7713094 chr03:007713094 0 W/7713094-7713094 FN3657-S SNP G -> T AC=1;AN=190;BQB=0.75011;DP=2435;DP4=940,1425,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000165488;MQSB=0.921214;RPB=0.939194;SGB=39.9877;VDB=0.690639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.3:7713917 chr03:007713917 0 W/7713917-7713917 FN2709-S SNP C -> T AC=1;AN=200;BQB=0.464903;DP=5463;DP4=2785,2385,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82424e-06;MQSB=0.813941;RPB=0.58954;SGB=13.8539;VDB=0.699882;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.3:7722640 chr03:007722640 0 W/7722640-7722640 FN266-S Single Base Substitution G-A INTERGENIC HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN773-S.SNP.3:7722751 chr03:007722751 0 W/7722751-7722751 FN773-S Single Base Substitution C-T INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2293.SNP.3:7730142 chr03:007730142 0 W/7730142-7730142 FN2293 SNP G -> A AC=1;AN=192;BQB=0.936104;DP=4858;DP4=2255,2286,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.62452e-11;MQSB=0.740073;RPB=0.918015;SGB=-14.2043;VDB=0.835487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.3:7730143 chr03:007730143 0 W/7730143-7730143 FN2293 SNP C -> A AC=1;AN=192;BQB=0.986293;DP=4854;DP4=2304,2266,4,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.20911e-09;MQSB=0.860615;RPB=0.991553;SGB=53.7748;VDB=0.801847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.3:7731848 chr03:007731848 0 W/7731848-7731848 FN1031-S Single Base Substitution C-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2379.SNP.3:7738164 chr03:007738164 0 W/7738164-7738164 FN2379 SNP C -> A AC=1;AN=192;BQB=0.405836;DP=5089;DP4=2121,2564,15,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.46152e-19;MQSB=0.983434;RPB=0.943199;SGB=82.7652;VDB=0.61094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.3:7742486 chr03:007742486 0 W/7742486-7742486 FN1355-S Single Base Substitution T-G INTRON HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN863-S.SNP.3:7746068 chr03:007746068 0 W/7746068-7746068 FN863-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN672-S.SNP.3:7753956 chr03:007753956 0 W/7753956-7753956 FN672-S Single Base Substitution A-T INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1217-S.SNP.3:7764911 chr03:007764911 0 W/7764911-7764911 FN1217-S Single Base Substitution C-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1472-S.SNP.3:7774225 chr03:007774225 0 W/7774225-7774225 FN1472-S Single Base Substitution A-G INTRON Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN3831-S.SNP.3:7775615 chr03:007775615 0 W/7775615-7775615 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.993363;DP=2442;DP4=1185,1130,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.82791e-08;MQSB=0.93159;RPB=0.817193;SGB=58.2031;VDB=0.211389;EFF=INTRON(MODIFIER||||232|LOC_Os03g14280|protein_coding|CODING|LOC_Os03g14280.1|4|1) FN1681-S.SNP.3:7796573 chr03:007796573 0 W/7796573-7796573 FN1681-S SNP T -> A AC=2;AN=188;BQB=0.995407;DP=3184;DP4=1209,1911,20,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.13284e-23;MQSB=0.89151;RPB=0.948118;SGB=-49.6956;VDB=0.639624;EFF=UTR_5_PRIME(MODIFIER||38||144|LOC_Os03g14320|protein_coding|CODING|LOC_Os03g14320.1|1|1) FN1424-S.SNP.3:7798010 chr03:007798010 0 W/7798010-7798010 FN1424-S Single Base Substitution T-C INTRON HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN789-S.SNP.3:7805850 chr03:007805850 0 W/7805850-7805850 FN789-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN3845-S.SNP.3:7812527 chr03:007812527 0 W/7812527-7812527 FN3845-S SNP G -> T AC=2;AN=190;BQB=0.999588;DP=3021;DP4=1404,1405,19,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.75342e-17;MQSB=0.946878;RPB=0.932362;SGB=92.9626;VDB=0.314188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.3:7812528 chr03:007812528 0 W/7812528-7812528 FN3845-S SNP A -> T AC=2;AN=190;BQB=0.693452;DP=3022;DP4=1433,1466,18,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.63157e-18;MQSB=0.747839;RPB=0.973167;SGB=121.957;VDB=0.249559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.3:7812897 chr03:007812897 0 W/7812897-7812897 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.0227278;DP=3298;DP4=1860,1402,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.22251e-08;MQSB=0.951664;RPB=0.790021;SGB=-68.0681;VDB=0.491374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.3:7816539 chr03:007816539 0 W/7816539-7816539 FN2538-S SNP T -> G AC=1;AN=198;BQB=0.987205;DP=4056;DP4=1931,1916,12,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.88363e-14;MQSB=0.0664952;RPB=0.488819;SGB=68.2711;VDB=0.255235;EFF=INTRON(MODIFIER||||538|LOC_Os03g14370|protein_coding|CODING|LOC_Os03g14370.1|2|1),INTRON(MODIFIER||||442|LOC_Os03g14370|protein_coding|CODING|LOC_Os03g14370.2|2|1) FN2532-S.SNP.3:7824293 chr03:007824293 0 W/7824293-7824293 FN2532-S SNP C -> A AC=2;AN=198;BQB=0.999958;DP=4149;DP4=1989,1914,23,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.41075e-24;MQSB=0.972787;RPB=0.304243;SGB=214.973;VDB=0.605557;EFF=INTRON(MODIFIER||||902|LOC_Os03g14380|protein_coding|CODING|LOC_Os03g14380.1|4|1) FN2222-S.SNP.3:7830503 chr03:007830503 0 W/7830503-7830503 FN2222-S SNP C -> T AC=2;AN=190;BQB=0.725693;DP=1318;DP4=9,1209,0,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.43281e-08;MQSB=0.963937;RPB=0.871755;SGB=36.1006;VDB=0.00547296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.3:7834507 chr03:007834507 0 W/7834507-7834507 FN3848-S SNP A -> T AC=2;AN=158;BQB=0.987305;DP=2439;DP4=1047,1180,10,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.40346e-13;MQSB=0.812523;RPB=0.271065;SGB=40.4048;VDB=0.817231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.3:7834518 chr03:007834518 0 W/7834518-7834518 FN3848-S SNP C -> T AC=2;AN=158;BQB=0.991904;DP=2498;DP4=1044,1357,11,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.634e-13;MQSB=0.742422;RPB=0.739099;SGB=90.7616;VDB=0.944356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.3:7835897 chr03:007835897 0 W/7835897-7835897 FN1689-S SNP A -> T AC=1;AN=188;BQB=0.766957;DP=2943;DP4=1592,1317,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.4241e-07;MQSB=0.997665;RPB=0.84063;SGB=-35.9944;VDB=0.983731;EFF=INTRON(MODIFIER||||846|LOC_Os03g14410|protein_coding|CODING|LOC_Os03g14410.1|2|1) FN1689-S.SNP.3:7835899 chr03:007835899 0 W/7835899-7835899 FN1689-S SNP A -> T AC=1;AN=188;BQB=0.0338872;DP=2959;DP4=1603,1321,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.84134e-07;MQSB=0.997577;RPB=0.934119;SGB=-60.4458;VDB=0.874767;EFF=INTRON(MODIFIER||||846|LOC_Os03g14410|protein_coding|CODING|LOC_Os03g14410.1|2|1) FN3700-S.SNP.3:7836471 chr03:007836471 0 W/7836471-7836471 FN3700-S SNP C -> A AC=1;AN=190;BQB=0.876446;DP=2902;DP4=1427,1374,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16125e-08;MQSB=0.978803;RPB=0.940636;SGB=36.1006;VDB=0.702813;EFF=INTRON(MODIFIER||||846|LOC_Os03g14410|protein_coding|CODING|LOC_Os03g14410.1|4|1) FN2600-S.SNP.3:7836730 chr03:007836730 0 W/7836730-7836730 FN2600-S SNP G -> T AC=2;AN=198;BQB=0.516208;DP=3992;DP4=1815,1948,17,33;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000250501;MQB=1.68177e-21;MQSB=0.88026;RPB=0.470575;SGB=60.3932;VDB=0.592285;EFF=INTRON(MODIFIER||||846|LOC_Os03g14410|protein_coding|CODING|LOC_Os03g14410.1|4|1) FN1506-S.SNP.3:7841719 chr03:007841719 0 W/7841719-7841719 FN1506-S Single Base Substitution C-T INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1123-S.SNP.3:7851774 chr03:007851774 0 W/7851774-7851774 FN1123-S Single Base Substitution T-A INTRON HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN4022-S.SNP.3:7860652 chr03:007860652 0 W/7860652-7860652 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.928673;DP=2523;DP4=1168,1260,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0114943;MQB=0.00788048;MQSB=2.00719e-07;RPB=0.289961;SGB=52.1728;VDB=0.359369;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.3:7861347 chr03:007861347 0 W/7861347-7861347 FN3426-S SNP C -> G AC=1;AN=184;BQB=0.947805;DP=2844;DP4=1481,1285,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0499297;MQB=0.751739;MQSB=1.36409e-18;RPB=0.576042;SGB=28.7043;VDB=0.289677;EFF=INTRON(MODIFIER||||455|LOC_Os03g14470|protein_coding|CODING|LOC_Os03g14470.1|2|1) FN-304.SNP.3:7872432 chr03:007872432 0 W/7872432-7872432 FN-304 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g14500 expressed protein SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-382.SNP.3:7875218 chr03:007875218 0 W/7875218-7875218 FN-382 Single Base Substitution G-A INTRON HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN3416-S.SNP.3:7875971 chr03:007875971 0 W/7875971-7875971 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.982095;DP=2464;DP4=1138,1230,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.34222e-10;MQSB=0.849908;RPB=0.104586;SGB=75.8731;VDB=0.00784715;EFF=INTRON(MODIFIER||||227|LOC_Os03g14510|protein_coding|CODING|LOC_Os03g14510.1|1|1),INTRON(MODIFIER||||227|LOC_Os03g14510|protein_coding|CODING|LOC_Os03g14510.2|1|1) FN3569-S.SNP.3:7881323 chr03:007881323 0 W/7881323-7881323 FN3569-S SNP A -> C AC=2;AN=188;BQB=0.928268;DP=3112;DP4=1698,1191,18,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54839e-14;MQSB=0.613894;RPB=0.439263;SGB=-42.3883;VDB=0.634047;EFF=UTR_5_PRIME(MODIFIER||54||232|LOC_Os03g14520|protein_coding|CODING|LOC_Os03g14520.1|1|1) FN950-S.SNP.3:7892089 chr03:007892089 0 W/7892089-7892089 FN950-S Single Base Substitution G-T INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN950-S.SNP.3:7892090 chr03:007892090 0 W/7892090-7892090 FN950-S Single Base Substitution A-T INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1323-S.SNP.3:7899835 chr03:007899835 0 W/7899835-7899835 FN1323-S Single Base Substitution A-G INTRON HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN3434-S.SNP.3:7902467 chr03:007902467 0 W/7902467-7902467 FN3434-S SNP C -> A AC=1;AN=184;BQB=0.99529;DP=3032;DP4=1586,1255,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64462e-05;MQSB=0.968405;RPB=0.185402;SGB=39.699;VDB=0.15874;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.3:7902528 chr03:007902528 0 W/7902528-7902528 FN-105 Single Base Substitution T-G INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN565-S.SNP.3:7905785 chr03:007905785 0 W/7905785-7905785 FN565-S Single Base Substitution A-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN967-S.SNP.3:7912048 chr03:007912048 0 W/7912048-7912048 FN967-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2080-S.SNP.3:7914700 chr03:007914700 0 W/7914700-7914700 FN2080-S SNP T -> A AC=1;AN=168;BQB=0.0267188;DP=3762;DP4=1848,1853,21,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28739e-18;MQSB=0.771824;RPB=0.359386;SGB=-237.157;VDB=0.109164;EFF=UTR_3_PRIME(MODIFIER||161||392|LOC_Os03g14590|protein_coding|CODING|LOC_Os03g14590.1|5|1),UTR_3_PRIME(MODIFIER||161||292|LOC_Os03g14590|protein_coding|CODING|LOC_Os03g14590.2|5|1),UTR_3_PRIME(MODIFIER||161||292|LOC_Os03g14590|protein_coding|CODING|LOC_Os03g14590.3|4|1) FN3857-S.SNP.3:7919417 chr03:007919417 0 W/7919417-7919417 FN3857-S SNP G -> A AC=1;AN=158;BQB=0.997976;DP=2805;DP4=1300,1353,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.47818e-05;MQSB=0.979182;RPB=0.722311;SGB=23.9652;VDB=0.193383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.3:7922435 chr03:007922435 0 W/7922435-7922435 FN3503-S SNP T -> A AC=1;AN=188;BQB=0.995473;DP=2744;DP4=1380,1202,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0105685;MQB=0.00564116;MQSB=1.81526e-07;RPB=0.814305;SGB=10.8165;VDB=0.484466;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.3:7923264 chr03:007923264 0 W/7923264-7923264 FN-186 Single Base Substitution G-A INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3556-S.SNP.3:7925676 chr03:007925676 0 W/7925676-7925676 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.958398;DP=3134;DP4=1177,1888,8,18;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.0475431;MQB=0.686146;MQSB=0;RPB=0.99459;SGB=112.585;VDB=0.480218;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S194L|883|LOC_Os03g14600|protein_coding|CODING|LOC_Os03g14600.1|2|1) FN451-S.SNP.3:7931377 chr03:007931377 0 W/7931377-7931377 FN451-S Single Base Substitution C-A INTRON HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN846-S.SNP.3:7941152 chr03:007941152 0 W/7941152-7941152 FN846-S Single Base Substitution T-C INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN848-S.SNP.3:7944961 chr03:007944961 0 W/7944961-7944961 FN848-S Single Base Substitution T-C INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4134-S.SNP.3:7946298 chr03:007946298 0 W/7946298-7946298 FN4134-S SNP G -> A AC=2;AN=182;BQB=0.997639;DP=2506;DP4=1218,1219,13,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.15917e-14;MQSB=0.677554;RPB=0.0545024;SGB=111.774;VDB=0.184825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.3:7946743 chr03:007946743 0 W/7946743-7946743 FN3721-S SNP G -> T AC=1;AN=190;BQB=0.915364;DP=2695;DP4=1485,1107,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90859e-09;MQSB=0.97815;RPB=0.213934;SGB=62.7569;VDB=0.636348;EFF=UTR_3_PRIME(MODIFIER||1||128|LOC_Os03g14630|protein_coding|CODING|LOC_Os03g14630.1|1|1) FN1106-S.SNP.3:7953706 chr03:007953706 0 W/7953706-7953706 FN1106-S Single Base Substitution G-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN-330.SNP.3:7954317 chr03:007954317 0 W/7954317-7954317 FN-330 Single Base Substitution A-T INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN4126-S.SNP.3:7959502 chr03:007959502 0 W/7959502-7959502 FN4126-S SNP G -> T AC=2;AN=182;BQB=0.775543;DP=3364;DP4=1700,1572,7,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.1698e-12;MQSB=0.937036;RPB=0.970698;SGB=84.7091;VDB=0.639752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A118D|148|LOC_Os03g14642|protein_coding|CODING|LOC_Os03g14642.1|1|1) FN4126-S.SNP.3:7959503 chr03:007959503 0 W/7959503-7959503 FN4126-S SNP C -> T AC=2;AN=182;BQB=0.92244;DP=3358;DP4=1707,1561,7,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.93035e-14;MQSB=0.9297;RPB=0.995575;SGB=89.2199;VDB=0.716207;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A118T|148|LOC_Os03g14642|protein_coding|CODING|LOC_Os03g14642.1|1|1) FN-151.SNP.3:7969671 chr03:007969671 0 W/7969671-7969671 FN-151 Single Base Substitution G-C INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. W423-5-1.SNP.3:7973906 chr03:007973906 0 W/7973906-7973906 W423-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN909-S.SNP.3:7977708 chr03:007977708 0 W/7977708-7977708 FN909-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN3292-S.SNP.3:7981292 chr03:007981292 0 W/7981292-7981292 FN3292-S SNP T -> A AC=1;AN=184;BQB=0.378988;DP=3642;DP4=1278,1844,13,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2259e-10;MQSB=0.995761;RPB=0.152353;SGB=-171.556;VDB=0.267191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1293-S.SNP.3:7983344 chr03:007983344 0 W/7983344-7983344 FN1293-S Single Base Substitution T-A INTRON HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1112-S.SNP.3:7996528 chr03:007996528 0 W/7996528-7996528 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2243-S.SNP.3:8004632 chr03:008004632 0 W/8004632-8004632 FN2243-S SNP A -> G AC=1;AN=190;BQB=0.376654;DP=4965;DP4=2532,2097,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02637e-09;MQSB=0.885744;RPB=0.249457;SGB=68.0854;VDB=0.178918;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D351|527|LOC_Os03g14720|protein_coding|CODING|LOC_Os03g14720.1|6|1) FN2662-S.SNP.3:8024413 chr03:008024413 0 W/8024413-8024413 FN2662-S SNP T -> A AC=1;AN=200;BQB=0.483479;DP=4675;DP4=2068,2262,15,15;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0109091;MQB=0.241973;MQSB=1.31362e-10;RPB=0.673845;SGB=-40.4483;VDB=0.333078;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.3:8030231 chr03:008030231 0 W/8030231-8030231 FN765-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g14770 retrotransposon protein, putative, unclassified, expressed SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN-346.SNP.3:8035214 chr03:008035214 0 W/8035214-8035214 FN-346 Single Base Substitution A-C INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN-74.SNP.3:8035661 chr03:008035661 0 W/8035661-8035661 FN-74 Single Base Substitution G-A INTERGENIC HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN486-S.SNP.3:8037179 chr03:008037179 0 W/8037179-8037179 FN486-S Single Base Substitution G-A INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3446-S.SNP.3:8055299 chr03:008055299 0 W/8055299-8055299 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.980617;DP=3190;DP4=1559,1510,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00125392;MQB=0.000494132;MQSB=0.85279;RPB=0.824027;SGB=48.7425;VDB=0.0632579;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.3:8065852 chr03:008065852 0 W/8065852-8065852 FN1394-S Single Base Substitution T-A INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2533-S.SNP.3:8074730 chr03:008074730 0 W/8074730-8074730 FN2533-S SNP T -> C AC=2;AN=198;BQB=0.986292;DP=4300;DP4=2070,1968,17,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.42485e-16;MQSB=0.919033;RPB=0.476671;SGB=90.4807;VDB=0.135446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.3:8075410 chr03:008075410 0 W/8075410-8075410 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.710935;DP=4395;DP4=2002,1899,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000227531;MQB=2.48185e-09;MQSB=0.0322571;RPB=0.976382;SGB=26.2136;VDB=0.688462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.3:8077393 chr03:008077393 0 W/8077393-8077393 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1085-S.SNP.3:8077394 chr03:008077394 0 W/8077394-8077394 FN1085-S Single Base Substitution A-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN-215.SNP.3:8082029 chr03:008082029 0 W/8082029-8082029 FN-215 Single Base Substitution T-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN4314-S.SNP.3:8082029 chr03:008082029 0 W/8082029-8082029 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.986568;DP=2349;DP4=854,1439,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000209371;MQSB=0.991677;RPB=0.948913;SGB=30.1021;VDB=0.519034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.3:8084689 chr03:008084689 0 W/8084689-8084689 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.998148;DP=3939;DP4=2058,1727,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.32251e-05;MQSB=0.438212;RPB=0.839635;SGB=44.9538;VDB=0.440607;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.3:8085191 chr03:008085191 0 W/8085191-8085191 W23-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2589-S.SNP.3:8091501 chr03:008091501 0 W/8091501-8091501 FN2589-S SNP G -> T AC=1;AN=198;BQB=0.999745;DP=3878;DP4=1898,1778,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.51076e-11;MQSB=0.977031;RPB=0.947803;SGB=31.9395;VDB=0.734459;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.3:8095288 chr03:008095288 0 W/8095288-8095288 FN-407 Single Base Substitution T-C INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN943-S.SNP.3:8102294 chr03:008102294 0 W/8102294-8102294 FN943-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g14860 G-patch domain containing protein, expressed SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1402-S.SNP.3:8105683 chr03:008105683 0 W/8105683-8105683 FN1402-S Single Base Substitution C-G INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2166-S.SNP.3:8112683 chr03:008112683 0 W/8112683-8112683 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.00965566;DP=3862;DP4=1947,1880,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.8099e-06;MQSB=0.845087;RPB=0.639014;SGB=-90.3546;VDB=0.391661;EFF=INTRON(MODIFIER||||265|LOC_Os03g14890|protein_coding|CODING|LOC_Os03g14890.1|6|1),INTRON(MODIFIER||||209|LOC_Os03g14890|protein_coding|CODING|LOC_Os03g14890.2|4|1) FN1084-S.SNP.3:8120300 chr03:008120300 0 W/8120300-8120300 FN1084-S Single Base Substitution A-T INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1084-S.SNP.3:8120302 chr03:008120302 0 W/8120302-8120302 FN1084-S Single Base Substitution A-T INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1464-S.SNP.3:8133655 chr03:008133655 0 W/8133655-8133655 FN1464-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g14915 expressed protein SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1335-S.SNP.3:8144477 chr03:008144477 0 W/8144477-8144477 FN1335-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN-200.SNP.3:8146835 chr03:008146835 0 W/8146835-8146835 FN-200 Single Base Substitution G-C INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-164.SNP.3:8147929 chr03:008147929 0 W/8147929-8147929 FN-164 Single Base Substitution C-G INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN320-S.SNP.3:8148549 chr03:008148549 0 W/8148549-8148549 FN320-S Single Base Substitution C-T INTERGENIC HOMO SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN687-S.SNP.3:8153624 chr03:008153624 0 W/8153624-8153624 FN687-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g14950 PLA IIIA/PLP7, putative, expressed SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2686-S.SNP.3:8157830 chr03:008157830 0 W/8157830-8157830 FN2686-S SNP C -> T AC=1;AN=200;BQB=0.991734;DP=5089;DP4=2706,2147,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3402e-05;MQSB=0.918603;RPB=0.855904;SGB=18.639;VDB=0.0936626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.3:8165591 chr03:008165591 0 W/8165591-8165591 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1338-S.SNP.3:8166505 chr03:008166505 0 W/8166505-8166505 FN1338-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2674-S.SNP.3:8167504 chr03:008167504 0 W/8167504-8167504 FN2674-S SNP G -> T AC=2;AN=200;BQB=0.509049;DP=4855;DP4=2241,2375,17,27;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.16615e-15;MQSB=0.270716;RPB=0.784852;SGB=99.8245;VDB=0.833694;EFF=INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.1|24|1),INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.2|23|1) FN3528-S.SNP.3:8169104 chr03:008169104 0 W/8169104-8169104 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.919735;DP=2658;DP4=1348,1243,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.88291e-16;MQSB=0.999596;RPB=0.713072;SGB=108.042;VDB=0.215117;EFF=INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.1|19|1),INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.2|18|1) FN3528-S.SNP.3:8169105 chr03:008169105 0 W/8169105-8169105 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.878865;DP=2660;DP4=1339,1237,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.59961e-16;MQSB=0.99989;RPB=0.824505;SGB=108.042;VDB=0.216708;EFF=INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.1|19|1),INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.2|18|1) FN3553-S.SNP.3:8170821 chr03:008170821 0 W/8170821-8170821 FN3553-S SNP C -> A AC=2;AN=188;BQB=0.732067;DP=2808;DP4=1365,1380,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.35342e-13;MQSB=0.959747;RPB=0.175218;SGB=117.128;VDB=0.746079;EFF=INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.1|15|1),INTRON(MODIFIER||||1133|LOC_Os03g14980|protein_coding|CODING|LOC_Os03g14980.2|14|1) FN982-S.SNP.3:8173674 chr03:008173674 0 W/8173674-8173674 FN982-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3382-S.SNP.3:8185824 chr03:008185824 0 W/8185824-8185824 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.834201;DP=3160;DP4=1780,1245,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=9.66727e-08;MQSB=0.777627;RPB=0.782741;SGB=33.3622;VDB=0.228299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E31V|290|LOC_Os03g15000|protein_coding|CODING|LOC_Os03g15000.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E171V|430|LOC_Os03g15000|protein_coding|CODING|LOC_Os03g15000.1|1|1) FN3776-S.SNP.3:8187939 chr03:008187939 0 W/8187939-8187939 FN3776-S SNP T -> A AC=2;AN=190;BQB=0.753123;DP=2599;DP4=1330,1128,15,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.54e-15;MQSB=0.864023;RPB=0.899763;SGB=61.9679;VDB=0.645884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.3:8191580 chr03:008191580 0 W/8191580-8191580 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.0980061;DP=3676;DP4=1907,1592,8,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=9.66674e-05;MQSB=0.0220953;RPB=0.43485;SGB=49.6594;VDB=0.454942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.3:8197390 chr03:008197390 0 W/8197390-8197390 FN2375 SNP C -> A AC=1;AN=192;BQB=0.994099;DP=4857;DP4=2111,2476,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.91337e-11;MQSB=0.806592;RPB=0.999122;SGB=54.0374;VDB=0.848684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G766V|956|LOC_Os03g15020|protein_coding|CODING|LOC_Os03g15020.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G606V|796|LOC_Os03g15020|protein_coding|CODING|LOC_Os03g15020.2|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G512V|702|LOC_Os03g15020|protein_coding|CODING|LOC_Os03g15020.3|14|1) FN452-S.SNP.3:8198033 chr03:008198033 0 W/8198033-8198033 FN452-S Single Base Substitution A-C INTRON HOMO SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN867-S.SNP.3:8203451 chr03:008203451 0 W/8203451-8203451 FN867-S Single Base Substitution C-A INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN3494-S.SNP.3:8211090 chr03:008211090 0 W/8211090-8211090 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.265203;DP=2512;DP4=1206,1247,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.64575e-06;MQSB=0.444493;RPB=0.989071;SGB=57.786;VDB=0.759007;EFF=INTRON(MODIFIER||||282|LOC_Os03g15033|protein_coding|CODING|LOC_Os03g15033.1|2|1) FN2161-S.SNP.3:8225247 chr03:008225247 0 W/8225247-8225247 FN2161-S SNP T -> C AC=1;AN=168;BQB=0.301668;DP=3860;DP4=1759,2073,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.0165295;MQSB=0.767653;RPB=0.219704;SGB=-14.9417;VDB=0.434617;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.3:8235756 chr03:008235756 0 W/8235756-8235756 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.482579;DP=4492;DP4=2189,1911,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0;MQB=1.47781e-06;MQSB=0.228165;RPB=0.788305;SGB=70.8662;VDB=0.398394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.3:8236822 chr03:008236822 0 W/8236822-8236822 FN1256-S Single Base Substitution G-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN785-S.SNP.3:8260871 chr03:008260871 0 W/8260871-8260871 FN785-S Single Base Substitution A-C INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2668-S.SNP.3:8263099 chr03:008263099 0 W/8263099-8263099 FN2668-S SNP T -> C AC=1;AN=200;BQB=0.966252;DP=4021;DP4=3452,375,31,0;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.101219;MQB=0.949127;MQSB=5.22863e-26;RPB=0.112349;SGB=137.158;VDB=0.0296172;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.3:8268334 chr03:008268334 0 W/8268334-8268334 FN4089-S SNP C -> T AC=1;AN=182;BQB=0.431496;DP=5433;DP4=2817,2456,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0362599;MQB=0.999942;MQSB=0;RPB=0.988072;SGB=28.6061;VDB=0.71094;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.3:8269706 chr03:008269706 0 W/8269706-8269706 FN884-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1368-S.SNP.3:8274556 chr03:008274556 0 W/8274556-8274556 FN1368-S Single Base Substitution C-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. 706-1.SNP.3:8302350 chr03:008302350 0 W/8302350-8302350 706-1 Single Base Substitution A-T INTRON Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. 706-2.SNP.3:8302350 chr03:008302350 0 W/8302350-8302350 706-2 Single Base Substitution A-T INTRON HET SNo: 1467, Mutant_ID: 706-2, Generation: M2, Mutations: 31, Genes: 5, Seed availability: Yes. W598-2-1.SNP.3:8311425 chr03:008311425 0 W/8311425-8311425 W598-2-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g15190 expressed protein SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2350.SNP.3:8311435 chr03:008311435 0 W/8311435-8311435 FN2350 SNP G -> C AC=1;AN=192;BQB=0.430148;DP=4903;DP4=2086,2363,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0405e-16;MQSB=0.133187;RPB=0.677974;SGB=140.497;VDB=0.432925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Gcg|P16A|193|LOC_Os03g15190|protein_coding|CODING|LOC_Os03g15190.1|1|1) FN3674-S.SNP.3:8313900 chr03:008313900 0 W/8313900-8313900 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.968647;DP=2906;DP4=1382,1440,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00378527;MQB=0.138378;MQSB=1.98396e-11;RPB=0.766794;SGB=39.9877;VDB=0.256733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.3:8333292 chr03:008333292 0 W/8333292-8333292 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.62679;DP=2651;DP4=1176,1379,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=9.63442e-05;MQSB=0.834945;RPB=0.923551;SGB=18.2315;VDB=0.136145;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.3:8352503 chr03:008352503 0 W/8352503-8352503 FN_N1-220-1 Single Base Substitution G-A HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN805-S.SNP.3:8353173 chr03:008353173 0 W/8353173-8353173 FN805-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN792-S.SNP.3:8367188 chr03:008367188 0 W/8367188-8367188 FN792-S Single Base Substitution A-C INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN-328.SNP.3:8373162 chr03:008373162 0 W/8373162-8373162 FN-328 Single Base Substitution C-T INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2212-S.SNP.3:8373162 chr03:008373162 0 W/8373162-8373162 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.769963;DP=4583;DP4=2174,2018,25,15;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0;MQB=2.06909e-14;MQSB=0.424518;RPB=0.213155;SGB=42.958;VDB=0.706577;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.3:8373162 chr03:008373162 0 W/8373162-8373162 FN4174-S SNP C -> T AC=2;AN=170;BQB=0.916436;DP=2426;DP4=1197,1128,7,6;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0;MQB=1.0865e-05;MQSB=0.753886;RPB=0.923858;SGB=52.3148;VDB=0.974437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.3:8374629 chr03:008374629 0 W/8374629-8374629 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.543753;DP=4474;DP4=2179,2045,10,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.8669e-08;MQSB=0.153131;RPB=0.962668;SGB=61.9006;VDB=0.422301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.3:8392695 chr03:008392695 0 W/8392695-8392695 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.725598;DP=2559;DP4=1155,1341,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.000781555;MQB=0.106789;MQSB=1.37846e-06;RPB=0.700952;SGB=10.6662;VDB=0.192198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.3:8393856 chr03:008393856 0 W/8393856-8393856 FN2456 SNP G -> C AC=1;AN=200;BQB=0.99994;DP=4547;DP4=2317,2001,7,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.00652387;MQSB=0.516039;RPB=0.829251;SGB=40.2696;VDB=0.158752;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.3:8406828 chr03:008406828 0 W/8406828-8406828 FN790-S Single Base Substitution T-C INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN810-S.SNP.3:8407261 chr03:008407261 0 W/8407261-8407261 FN810-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g15360 nmrA-like family domain containing protein, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN810-S.SNP.3:8407262 chr03:008407262 0 W/8407262-8407262 FN810-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN488-S.SNP.3:8408103 chr03:008408103 0 W/8408103-8408103 FN488-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g15360 nmrA-like family domain containing protein, expressed SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN488-S.SNP.3:8408104 chr03:008408104 0 W/8408104-8408104 FN488-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g15360 nmrA-like family domain containing protein, expressed SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN873-S.SNP.3:8413121 chr03:008413121 0 W/8413121-8413121 FN873-S Single Base Substitution G-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3499-S.SNP.3:8416359 chr03:008416359 0 W/8416359-8416359 FN3499-S SNP A -> G AC=1;AN=188;BQB=0.962033;DP=2441;DP4=1263,1126,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.98836e-07;MQSB=0.974641;RPB=0.652772;SGB=32.441;VDB=0.993686;EFF=INTRON(MODIFIER||||636|LOC_Os03g15390|protein_coding|CODING|LOC_Os03g15390.1|2|1) FN2269-S.SNP.3:8426811 chr03:008426811 0 W/8426811-8426811 FN2269-S SNP C -> A AC=2;AN=190;BQB=0.359526;DP=4540;DP4=2263,1989,31,33;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0;MQB=9.2111e-23;MQSB=0.941426;RPB=0.249818;SGB=217.348;VDB=0.358576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.3:8437723 chr03:008437723 0 W/8437723-8437723 FN2572-S SNP A -> C AC=2;AN=198;BQB=0.773859;DP=4368;DP4=2109,1981,33,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.8012e-42;MQSB=0.999968;RPB=0.39529;SGB=270.894;VDB=0.888358;EFF=SPLICE_SITE_REGION(LOW||||718|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.1|3|1),SPLICE_SITE_REGION(LOW||||534|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.2|3|1),INTRON(MODIFIER||||718|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.1|3|1),INTRON(MODIFIER||||534|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.2|3|1) FN2274-S.SNP.3:8439732 chr03:008439732 0 W/8439732-8439732 FN2274-S SNP T -> C AC=1;AN=190;BQB=0.999598;DP=4843;DP4=2285,2265,18,19;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=1.04191e-10;MQSB=0.0216137;RPB=0.699933;SGB=38.2964;VDB=0.131688;EFF=INTRON(MODIFIER||||718|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.1|2|1),INTRON(MODIFIER||||534|LOC_Os03g15430|protein_coding|CODING|LOC_Os03g15430.2|2|1) FN2314.SNP.3:8443780 chr03:008443780 0 W/8443780-8443780 FN2314 SNP C -> A AC=2;AN=192;BQB=0.440043;DP=4812;DP4=2302,2148,19,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.04825e-12;MQSB=0.40912;RPB=0.426352;SGB=-42.7339;VDB=0.688297;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.3:8444369 chr03:008444369 0 W/8444369-8444369 FN1082-S Single Base Substitution C-T INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN3287-S.SNP.3:8449671 chr03:008449671 0 W/8449671-8449671 FN3287-S SNP G -> A AC=2;AN=184;BQB=0.995345;DP=3002;DP4=1440,1403,23,17;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0;MQB=3.85164e-13;MQSB=0.851572;RPB=0.908444;SGB=130.836;VDB=0.323917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1462-S.SNP.3:8450083 chr03:008450083 0 W/8450083-8450083 FN1462-S Single Base Substitution A-T INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1320-S.SNP.3:8452349 chr03:008452349 0 W/8452349-8452349 FN1320-S Single Base Substitution A-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2556-S.SNP.3:8453025 chr03:008453025 0 W/8453025-8453025 FN2556-S SNP G -> T AC=1;AN=198;BQB=0.0331883;DP=3287;DP4=1260,1681,19,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=5.82038e-10;MQSB=1.63695e-20;RPB=0.975021;SGB=101.266;VDB=0.483303;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.3:8485951 chr03:008485951 0 W/8485951-8485951 FN921-S Single Base Substitution C-A INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-71.SNP.3:8487859 chr03:008487859 0 W/8487859-8487859 FN-71 Single Base Substitution C-T UTR_5_PRIME HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-71.SNP.3:8487860 chr03:008487860 0 W/8487860-8487860 FN-71 Single Base Substitution C-T UTR_5_PRIME HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3468-S.SNP.3:8494314 chr03:008494314 0 W/8494314-8494314 FN3468-S SNP C -> T AC=1;AN=184;BQB=0.279143;DP=1675;DP4=1569,27,11,1;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000269206;MQSB=0.0518148;RPB=0.705878;SGB=32.2261;VDB=0.978783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.3:8494516 chr03:008494516 0 W/8494516-8494516 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.783581;DP=1843;DP4=1292,463,8,1;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00851956;MQSB=0.999838;RPB=0.841806;SGB=35.4339;VDB=0.567736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.3:8495300 chr03:008495300 0 W/8495300-8495300 FN3712-S SNP T -> G AC=2;AN=190;BQB=0.709132;DP=2861;DP4=1305,1470,17,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.60721e-15;MQSB=0.975327;RPB=0.0385844;SGB=126.511;VDB=0.501723;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.3:8499599 chr03:008499599 0 W/8499599-8499599 FN865-S Single Base Substitution C-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2435.SNP.3:8509471 chr03:008509471 0 W/8509471-8509471 FN2435 SNP C -> T AC=1;AN=200;BQB=0.96052;DP=5399;DP4=2404,2712,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24841e-06;MQSB=0.998644;RPB=0.534507;SGB=40.4492;VDB=0.682972;EFF=INTERGENIC(MODIFIER||||||||||1) FN1555-S.SNP.3:8513627 chr03:008513627 0 W/8513627-8513627 FN1555-S Single Base Substitution A-T INTRON HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1555-S.SNP.3:8513629 chr03:008513629 0 W/8513629-8513629 FN1555-S Single Base Substitution A-T INTRON HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN3997-S.SNP.3:8531227 chr03:008531227 0 W/8531227-8531227 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.968972;DP=2847;DP4=1534,1218,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.0127565;MQSB=0.429769;RPB=0.423449;SGB=25.5891;VDB=0.209095;EFF=UTR_3_PRIME(MODIFIER||71||394|LOC_Os03g15530|protein_coding|CODING|LOC_Os03g15530.1|1|1) FN-67.SNP.3:8532983 chr03:008532983 0 W/8532983-8532983 FN-67 Single Base Substitution G-A UTR_5_PRIME HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN871-S.SNP.3:8533192 chr03:008533192 0 W/8533192-8533192 FN871-S Single Base Substitution A-T INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-269.SNP.3:8543166 chr03:008543166 0 W/8543166-8543166 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2465.SNP.3:8545293 chr03:008545293 0 W/8545293-8545293 FN2465 SNP T -> A AC=1;AN=200;BQB=0.544499;DP=3230;DP4=1126,1622,11,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000153785;MQSB=0.994466;RPB=0.968666;SGB=-14.9257;VDB=0.00290195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.3:8545624 chr03:008545624 0 W/8545624-8545624 FN3666-S SNP A -> T AC=1;AN=190;BQB=0.595899;DP=1698;DP4=1069,493,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.82294e-07;MQSB=0.971235;RPB=0.417411;SGB=25.439;VDB=0.945808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.3:8545625 chr03:008545625 0 W/8545625-8545625 FN3666-S SNP G -> T AC=1;AN=190;BQB=0.911724;DP=1699;DP4=1109,503,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17287e-07;MQSB=0.982197;RPB=0.533506;SGB=44.5415;VDB=0.823545;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.3:8558261 chr03:008558261 0 W/8558261-8558261 FN809-S Single Base Substitution A-G INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN4302-S.SNP.3:8571177 chr03:008571177 0 W/8571177-8571177 FN4302-S SNP C -> T AC=1;AN=170;BQB=0.985984;DP=2449;DP4=1180,1198,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.72092e-09;MQSB=0.964991;RPB=0.515781;SGB=45.206;VDB=0.918524;EFF=INTRON(MODIFIER||||221|LOC_Os03g15560|protein_coding|CODING|LOC_Os03g15560.1|3|1) FN3885-S.SNP.3:8573919 chr03:008573919 0 W/8573919-8573919 FN3885-S SNP G -> A AC=1;AN=158;BQB=0.911994;DP=2479;DP4=1164,1229,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.43319e-11;MQSB=0.841306;RPB=0.735382;SGB=50.9207;VDB=0.782382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A564V|597|LOC_Os03g15570|protein_coding|CODING|LOC_Os03g15570.1|8|1) FN984-S.SNP.3:8574992 chr03:008574992 0 W/8574992-8574992 FN984-S Single Base Substitution G-C INTRON HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2638-S.SNP.3:8582416 chr03:008582416 0 W/8582416-8582416 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.895927;DP=5207;DP4=2411,2525,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.18824e-13;MQSB=0.964773;RPB=0.991225;SGB=17.5158;VDB=0.779386;EFF=INTRON(MODIFIER||||1250|LOC_Os03g15580|protein_coding|CODING|LOC_Os03g15580.1|17|1) FN2638-S.SNP.3:8582420 chr03:008582420 0 W/8582420-8582420 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.710736;DP=5213;DP4=2405,2603,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16326e-13;MQSB=0.984073;RPB=0.979041;SGB=61.9006;VDB=0.731063;EFF=INTRON(MODIFIER||||1250|LOC_Os03g15580|protein_coding|CODING|LOC_Os03g15580.1|17|1) FN2241-S.SNP.3:8585511 chr03:008585511 0 W/8585511-8585511 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.221304;DP=5100;DP4=2343,2373,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00313725;MQB=1.90369e-08;MQSB=0.126641;RPB=0.999599;SGB=62.7569;VDB=0.56733;EFF=INTRON(MODIFIER||||1250|LOC_Os03g15580|protein_coding|CODING|LOC_Os03g15580.1|14|1) FN2241-S.SNP.3:8585512 chr03:008585512 0 W/8585512-8585512 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.32681;DP=5088;DP4=2287,2455,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00314465;MQB=1.87363e-08;MQSB=0.138398;RPB=0.988521;SGB=62.7569;VDB=0.592534;EFF=INTRON(MODIFIER||||1250|LOC_Os03g15580|protein_coding|CODING|LOC_Os03g15580.1|14|1) FN483-S.SNP.3:8588400 chr03:008588400 0 W/8588400-8588400 FN483-S Single Base Substitution A-T INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2418.SNP.3:8600388 chr03:008600388 0 W/8600388-8600388 FN2418 SNP G -> A AC=1;AN=200;BQB=0.791353;DP=4155;DP4=2267,1693,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94045e-05;MQSB=0.906255;RPB=0.739731;SGB=31.2392;VDB=0.346875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R42C|227|LOC_Os03g15590|protein_coding|CODING|LOC_Os03g15590.1|1|1) FN1701-S.SNP.3:8601876 chr03:008601876 0 W/8601876-8601876 FN1701-S SNP G -> T AC=1;AN=188;BQB=0.056723;DP=3094;DP4=1767,1305,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.54199e-05;MQSB=0.96472;RPB=0.801228;SGB=-0.634963;VDB=0.781161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.3:8605112 chr03:008605112 0 W/8605112-8605112 FN3807-S SNP C -> A AC=1;AN=190;BQB=0.992763;DP=2422;DP4=1194,1159,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000825764;MQB=5.6201e-05;MQSB=0.531405;RPB=0.776394;SGB=30.8803;VDB=0.935918;EFF=UTR_3_PRIME(MODIFIER||3276||187|LOC_Os03g15600|protein_coding|CODING|LOC_Os03g15600.1|5|1) FN2640-S.SNP.3:8607277 chr03:008607277 0 W/8607277-8607277 FN2640-S SNP T -> C AC=1;AN=200;BQB=0.988329;DP=5216;DP4=2648,2360,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44326e-10;MQSB=0.294265;RPB=0.643296;SGB=51.0851;VDB=0.412274;EFF=INTRON(MODIFIER||||187|LOC_Os03g15600|protein_coding|CODING|LOC_Os03g15600.1|3|1) FN3758-S.SNP.3:8613755 chr03:008613755 0 W/8613755-8613755 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.995922;DP=2321;DP4=1120,1104,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43003e-05;MQSB=0.837487;RPB=0.997215;SGB=39.9877;VDB=0.920202;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L662|956|LOC_Os03g15610|protein_coding|CODING|LOC_Os03g15610.1|3|1) FN3479-S.SNP.3:8614500 chr03:008614500 0 W/8614500-8614500 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.981774;DP=5016;DP4=2821,2043,15,18;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.00837321;MQB=0.000294744;MQSB=0;RPB=0.99026;SGB=143.7;VDB=0.0870925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R910Q|956|LOC_Os03g15610|protein_coding|CODING|LOC_Os03g15610.1|3|1) FN4166-S.SNP.3:8615821 chr03:008615821 0 W/8615821-8615821 FN4166-S SNP C -> T AC=1;AN=170;BQB=0.97468;DP=3311;DP4=1892,1338,12,11;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0809423;MQB=0.999257;MQSB=7.89604e-06;RPB=0.999554;SGB=96.7413;VDB=0.329057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1855D|1918|LOC_Os03g15620|protein_coding|CODING|LOC_Os03g15620.1|2|1) FN4184-S.SNP.3:8616071 chr03:008616071 0 W/8616071-8616071 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.958636;DP=4512;DP4=2487,1913,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0121897;MQB=0.813232;MQSB=0.916188;RPB=0.683302;SGB=61.2001;VDB=0.582306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1772S|1918|LOC_Os03g15620|protein_coding|CODING|LOC_Os03g15620.1|2|1) FN1219-S.SNP.3:8617644 chr03:008617644 0 W/8617644-8617644 FN1219-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3815-S.SNP.3:8622425 chr03:008622425 0 W/8622425-8622425 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.87797;DP=2298;DP4=842,1319,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000435161;MQB=0.000384629;MQSB=0.999936;RPB=0.465717;SGB=-3.65821;VDB=0.0884795;EFF=INTERGENIC(MODIFIER||||||||||1) FN_841-7-2.SNP.3:8625481 chr03:008625481 0 W/8625481-8625481 FN_841-7-2 Single Base Substitution T-G HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2698-S.SNP.3:8627041 chr03:008627041 0 W/8627041-8627041 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.88946;DP=5015;DP4=2302,2371,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60151e-08;MQSB=0.96959;RPB=0.439851;SGB=16.4591;VDB=0.093562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.3:8627042 chr03:008627042 0 W/8627042-8627042 FN2698-S SNP A -> T AC=1;AN=200;BQB=0.973807;DP=5013;DP4=2207,2286,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68126e-08;MQSB=0.935338;RPB=0.929449;SGB=21.6694;VDB=0.290594;EFF=INTERGENIC(MODIFIER||||||||||1) FN-388.SNP.3:8628086 chr03:008628086 0 W/8628086-8628086 FN-388 Single Base Substitution G-A INTRON HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN923-S.SNP.3:8632244 chr03:008632244 0 W/8632244-8632244 FN923-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g15650 vacuolar sorting protein, putative, expressed SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN1271-S.SNP.3:8655328 chr03:008655328 0 W/8655328-8655328 FN1271-S Single Base Substitution C-T INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2721-S.SNP.3:8659151 chr03:008659151 0 W/8659151-8659151 FN2721-S SNP A -> G AC=1;AN=200;BQB=0.868362;DP=4878;DP4=2426,2218,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.48538e-11;MQSB=0.95278;RPB=0.512446;SGB=72.6852;VDB=0.0184178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y278C|374|LOC_Os03g15690|protein_coding|CODING|LOC_Os03g15690.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y175C|271|LOC_Os03g15690|protein_coding|CODING|LOC_Os03g15690.2|3|1) FN-101.SNP.3:8660589 chr03:008660589 0 W/8660589-8660589 FN-101 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g15700 splicing factor 3A subunit 2, putative, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2596-S.SNP.3:8663825 chr03:008663825 0 W/8663825-8663825 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.976348;DP=4752;DP4=2261,2254,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.60519e-14;MQSB=0.980362;RPB=0.978294;SGB=68.91;VDB=0.148493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.3:8663889 chr03:008663889 0 W/8663889-8663889 FN2499 SNP G -> A AC=1;AN=200;BQB=0.999656;DP=5084;DP4=2403,2309,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.18312e-12;MQSB=0.991716;RPB=0.942265;SGB=45.1159;VDB=0.574382;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.3:8672366 chr03:008672366 0 W/8672366-8672366 FN3712-S SNP G -> A AC=2;AN=190;BQB=0.385565;DP=2270;DP4=1196,990,9,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.61876e-05;MQSB=0.995742;RPB=0.322366;SGB=58.2031;VDB=0.315657;EFF=INTERGENIC(MODIFIER||||||||||1) FN1726-S.SNP.3:8672382 chr03:008672382 0 W/8672382-8672382 FN1726-S SNP C -> T AC=1;AN=188;BQB=0.873668;DP=2089;DP4=1003,1033,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.27869e-08;MQSB=0.995425;RPB=0.686352;SGB=53.7007;VDB=0.0641108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.3:8689198 chr03:008689198 0 W/8689198-8689198 FN-65 Single Base Substitution T-A INTRON HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN-216.SNP.3:8690316 chr03:008690316 0 W/8690316-8690316 FN-216 Single Base Substitution C-T INTRON HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3564-S.SNP.3:8700377 chr03:008700377 0 W/8700377-8700377 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.985688;DP=2604;DP4=1288,1247,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.10143e-06;MQSB=0.999637;RPB=0.243013;SGB=35.3493;VDB=0.0491808;EFF=INTRON(MODIFIER||||392|LOC_Os03g15770|protein_coding|CODING|LOC_Os03g15770.1|4|1),INTRON(MODIFIER||||392|LOC_Os03g15770|protein_coding|CODING|LOC_Os03g15770.2|4|1),INTRON(MODIFIER||||392|LOC_Os03g15770|protein_coding|CODING|LOC_Os03g15770.3|4|1) FN-74.SNP.3:8701211 chr03:008701211 0 W/8701211-8701211 FN-74 Single Base Substitution A-G INTRON HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2725-S.SNP.3:8710033 chr03:008710033 0 W/8710033-8710033 FN2725-S SNP C -> T AC=2;AN=200;BQB=0.558102;DP=4811;DP4=2324,2272,18,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.18606e-20;MQSB=0.984405;RPB=0.571959;SGB=81.5883;VDB=0.810512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.3:8720012 chr03:008720012 0 W/8720012-8720012 FN2478 SNP A -> C AC=1;AN=200;BQB=0.851596;DP=4112;DP4=1937,1833,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93319e-08;MQSB=0.297581;RPB=0.942135;SGB=72.6852;VDB=0.0199164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.3:8721892 chr03:008721892 0 W/8721892-8721892 FN3821-S SNP T -> C AC=1;AN=190;BQB=0.616277;DP=2497;DP4=1176,1241,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.25685e-12;MQSB=0.975684;RPB=0.993017;SGB=60.9777;VDB=0.970104;EFF=INTRON(MODIFIER||||1002|LOC_Os03g15810|protein_coding|CODING|LOC_Os03g15810.1|21|1) FN1399-S.SNP.3:8730874 chr03:008730874 0 W/8730874-8730874 FN1399-S Single Base Substitution G-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2324.SNP.3:8730874 chr03:008730874 0 W/8730874-8730874 FN2324 SNP G -> A AC=2;AN=192;BQB=0.736785;DP=5109;DP4=2538,2292,29,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.18052e-27;MQSB=0.97524;RPB=0.0354081;SGB=164.532;VDB=0.43179;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.3:8730874 chr03:008730874 0 W/8730874-8730874 W674-4-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. W466-5-1.SNP.3:8735044 chr03:008735044 0 W/8735044-8735044 W466-5-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g15830 transposon protein, putative, unclassified, expressed SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1624-S.SNP.3:8738022 chr03:008738022 0 W/8738022-8738022 FN1624-S Single Base Substitution C-T INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN820-S.SNP.3:8738290 chr03:008738290 0 W/8738290-8738290 FN820-S Single Base Substitution C-G INTRON HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN3909-S.SNP.3:8745693 chr03:008745693 0 W/8745693-8745693 FN3909-S SNP T -> A AC=1;AN=158;BQB=0.957604;DP=2641;DP4=1327,1185,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.75205e-10;MQSB=0.937889;RPB=0.963171;SGB=73.2838;VDB=0.647802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.3:8748995 chr03:008748995 0 W/8748995-8748995 FN2713-S SNP T -> A AC=1;AN=200;BQB=0.972875;DP=4896;DP4=2366,2222,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.12271e-12;MQSB=0.993038;RPB=0.599044;SGB=17.5158;VDB=0.912742;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.3:8751426 chr03:008751426 0 W/8751426-8751426 FN1369-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3559-S.SNP.3:8763986 chr03:008763986 0 W/8763986-8763986 FN3559-S SNP G -> C AC=1;AN=188;BQB=0.999604;DP=3574;DP4=1918,1522,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.45767e-14;MQSB=0.703098;RPB=0.958859;SGB=112.585;VDB=0.467027;EFF=UTR_5_PRIME(MODIFIER||198||589|LOC_Os03g15880|protein_coding|CODING|LOC_Os03g15880.5|2|1),UTR_5_PRIME(MODIFIER||198||589|LOC_Os03g15880|protein_coding|CODING|LOC_Os03g15880.1|2|1),UTR_5_PRIME(MODIFIER||198||589|LOC_Os03g15880|protein_coding|CODING|LOC_Os03g15880.4|2|1),UTR_5_PRIME(MODIFIER||198||589|LOC_Os03g15880|protein_coding|CODING|LOC_Os03g15880.2|3|1),UTR_5_PRIME(MODIFIER||198||589|LOC_Os03g15880|protein_coding|CODING|LOC_Os03g15880.3|3|1) FN3526-S.SNP.3:8772776 chr03:008772776 0 W/8772776-8772776 FN3526-S SNP G -> C AC=2;AN=188;BQB=0.996317;DP=3665;DP4=1489,2095,18,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.3019e-21;MQSB=0.800197;RPB=0.972428;SGB=158.018;VDB=0.644064;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.3:8775183 chr03:008775183 0 W/8775183-8775183 FN1535-S Single Base Substitution G-A INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1156-S.SNP.3:8781973 chr03:008781973 0 W/8781973-8781973 FN1156-S Single Base Substitution T-A INTRON HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2304.SNP.3:8784677 chr03:008784677 0 W/8784677-8784677 FN2304 SNP T -> C AC=1;AN=192;BQB=0.551636;DP=5204;DP4=2707,2244,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.172e-13;MQSB=0.977136;RPB=0.462728;SGB=59.6861;VDB=0.225786;EFF=INTRON(MODIFIER||||1041|LOC_Os03g15900|protein_coding|CODING|LOC_Os03g15900.2|20|1) FN2459.SNP.3:8787290 chr03:008787290 0 W/8787290-8787290 FN2459 SNP C -> A AC=1;AN=200;BQB=0.987568;DP=4348;DP4=2181,1862,16,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=8.62364e-14;MQSB=3.62809e-06;RPB=0.999911;SGB=72.7161;VDB=0.68031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2459.SNP.3:8787291 chr03:008787291 0 W/8787291-8787291 FN2459 SNP G -> A AC=1;AN=200;BQB=0.995345;DP=4350;DP4=2188,1887,16,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.88415e-15;MQSB=4.50438e-06;RPB=0.999585;SGB=50.3263;VDB=0.844747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.3:8791621 chr03:008791621 0 W/8791621-8791621 FN1383-S Single Base Substitution A-T INTRON HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3793-S.SNP.3:8809073 chr03:008809073 0 W/8809073-8809073 FN3793-S SNP T -> A AC=2;AN=190;BQB=0.524005;DP=2861;DP4=1329,1426,7,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.00934e-06;MQSB=0.924551;RPB=0.979069;SGB=15.9981;VDB=0.454942;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I474N|519|LOC_Os03g15970|protein_coding|CODING|LOC_Os03g15970.1|4|1) FN3516-S.SNP.3:8810450 chr03:008810450 0 W/8810450-8810450 FN3516-S SNP C -> T AC=2;AN=188;BQB=0.852937;DP=2668;DP4=1374,1209,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.08187e-13;MQSB=0.899301;RPB=0.611128;SGB=64.3306;VDB=0.164309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.3:8810451 chr03:008810451 0 W/8810451-8810451 FN3516-S SNP A -> T AC=2;AN=188;BQB=0.781238;DP=2667;DP4=1368,1214,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.94083e-13;MQSB=0.894881;RPB=0.937319;SGB=94.4119;VDB=0.381179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.3:8813447 chr03:008813447 0 W/8813447-8813447 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.92149;DP=3131;DP4=1310,1702,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000965787;MQSB=0.9576;RPB=0.491884;SGB=26.2637;VDB=0.0168868;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.3:8813447 chr03:008813447 0 W/8813447-8813447 W607-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1633-S.SNP.3:8823254 chr03:008823254 0 W/8823254-8823254 FN1633-S Single Base Substitution A-T INTRON Homo SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3695-S.SNP.3:8825306 chr03:008825306 0 W/8825306-8825306 FN3695-S SNP C -> T AC=1;AN=190;BQB=0.829655;DP=3340;DP4=2091,1131,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.145509;MQB=0.00530441;MQSB=3.65247e-25;RPB=0.652945;SGB=-67.5498;VDB=0.33337;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.3:8832744 chr03:008832744 0 W/8832744-8832744 FN3945-S SNP C -> A AC=1;AN=168;BQB=0.984669;DP=2791;DP4=1423,1262,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.43913e-06;MQSB=0.988608;RPB=0.719069;SGB=34.4498;VDB=0.521248;EFF=INTRON(MODIFIER||||594|LOC_Os03g16010|protein_coding|CODING|LOC_Os03g16010.1|12|1) FN1465-S.SNP.3:8837930 chr03:008837930 0 W/8837930-8837930 FN1465-S Single Base Substitution A-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2121-S.SNP.3:8847488 chr03:008847488 0 W/8847488-8847488 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.985224;DP=3907;DP4=1625,2238,7,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.13402e-12;MQSB=0.874645;RPB=0.966444;SGB=21.3605;VDB=0.779631;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.3:8847488 chr03:008847488 0 W/8847488-8847488 FN770-S Single Base Substitution C-T INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3699-S.SNP.3:8848614 chr03:008848614 0 W/8848614-8848614 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.815478;DP=3048;DP4=1340,1604,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.45535e-05;MQSB=0.969741;RPB=0.991639;SGB=13.4442;VDB=0.293805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.3:8848736 chr03:008848736 0 W/8848736-8848736 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.386829;DP=4337;DP4=1803,2299,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.3807e-14;MQSB=0.952839;RPB=0.225052;SGB=79.6954;VDB=0.433476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.3:8862765 chr03:008862765 0 W/8862765-8862765 FN3473-S SNP A -> G AC=1;AN=184;BQB=0.936242;DP=2457;DP4=1257,1105,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.6939e-05;MQSB=0.986015;RPB=0.93482;SGB=39.699;VDB=0.92643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.3:8864700 chr03:008864700 0 W/8864700-8864700 FN3115-S SNP G -> A AC=1;AN=184;BQB=0.911414;DP=2985;DP4=1385,1500,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.24756e-09;MQSB=0.766251;RPB=0.0604112;SGB=80.3949;VDB=0.0822431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.3:8869691 chr03:008869691 0 W/8869691-8869691 FN3493-S SNP A -> G AC=1;AN=184;BQB=0.94834;DP=2904;DP4=1393,1419,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.50685e-08;MQSB=0.998926;RPB=0.999997;SGB=32.2261;VDB=0.272591;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.3:8870164 chr03:008870164 0 W/8870164-8870164 FN1286-S Single Base Substitution A-G INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN961-S.SNP.3:8880081 chr03:008880081 0 W/8880081-8880081 FN961-S Single Base Substitution A-G INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-83.SNP.3:8881657 chr03:008881657 0 W/8881657-8881657 FN-83 Single Base Substitution T-C INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN2195-S.SNP.3:8887761 chr03:008887761 0 W/8887761-8887761 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.901959;DP=5054;DP4=2351,2362,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.3456e-11;MQSB=0.884027;RPB=0.99955;SGB=76.4186;VDB=0.853664;EFF=STOP_LOST(HIGH|MISSENSE|tgA/tgG|*323W|322|LOC_Os03g16110|protein_coding|CODING|LOC_Os03g16110.1|3|1),STOP_LOST(HIGH|MISSENSE|tgA/tgG|*323W|322|LOC_Os03g16110|protein_coding|CODING|LOC_Os03g16110.2|3|1),STOP_LOST(HIGH|MISSENSE|tgA/tgG|*323W|322|LOC_Os03g16110|protein_coding|CODING|LOC_Os03g16110.3|3|1) FN1027-S.SNP.3:8902766 chr03:008902766 0 W/8902766-8902766 FN1027-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3732-S.SNP.3:8908236 chr03:008908236 0 W/8908236-8908236 FN3732-S SNP T -> C AC=1;AN=190;BQB=0.994547;DP=2984;DP4=1423,1460,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.21213e-08;MQSB=0.987337;RPB=0.721427;SGB=58.2031;VDB=0.154007;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.3:8909889 chr03:008909889 0 W/8909889-8909889 FN-394 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g16150 mannose-1-phosphate guanyltransferase, putative, expressed SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2554-S.SNP.3:8922201 chr03:008922201 0 W/8922201-8922201 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.995091;DP=3851;DP4=1904,1799,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.87631e-11;MQSB=0.937594;RPB=0.9821;SGB=10.9445;VDB=0.552074;EFF=INTRON(MODIFIER||||404|LOC_Os03g16170|protein_coding|CODING|LOC_Os03g16170.1|3|1),INTRON(MODIFIER||||294|LOC_Os03g16170|protein_coding|CODING|LOC_Os03g16170.2|2|1) FN2554-S.SNP.3:8922202 chr03:008922202 0 W/8922202-8922202 FN2554-S SNP C -> A AC=1;AN=198;BQB=0.982088;DP=3842;DP4=1888,1768,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71083e-10;MQSB=0.959071;RPB=0.985229;SGB=47.3393;VDB=0.562987;EFF=INTRON(MODIFIER||||404|LOC_Os03g16170|protein_coding|CODING|LOC_Os03g16170.1|3|1),INTRON(MODIFIER||||294|LOC_Os03g16170|protein_coding|CODING|LOC_Os03g16170.2|2|1) FN698-S.SNP.3:8925284 chr03:008925284 0 W/8925284-8925284 FN698-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g16180 retrotransposon protein, putative, unclassified SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN682-S.SNP.3:8926891 chr03:008926891 0 W/8926891-8926891 FN682-S Single Base Substitution C-T INTERGENIC HOMO SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2653-S.SNP.3:8927398 chr03:008927398 0 W/8927398-8927398 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.578535;DP=5657;DP4=3302,2073,13,18;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0411879;MQB=0.456578;MQSB=2.42927e-08;RPB=0.852785;SGB=65.9573;VDB=0.744552;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.3:8927780 chr03:008927780 0 W/8927780-8927780 FN919-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g16190 retrotransposon protein, putative, unclassified SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2471.SNP.3:8929374 chr03:008929374 0 W/8929374-8929374 FN2471 SNP G -> A AC=1;AN=200;BQB=0.228216;DP=4424;DP4=2164,1848,15,15;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.120931;MQB=0.0860433;MQSB=0;RPB=0.993352;SGB=63.3521;VDB=0.90556;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.3:8932842 chr03:008932842 0 W/8932842-8932842 W278-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2609-S.SNP.3:8934063 chr03:008934063 0 W/8934063-8934063 FN2609-S SNP A -> T AC=1;AN=198;BQB=0.861419;DP=4219;DP4=1845,2195,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000237023;MQB=7.09159e-15;MQSB=0.215736;RPB=0.645223;SGB=86.8856;VDB=0.875721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.3:8934073 chr03:008934073 0 W/8934073-8934073 FN2283 SNP G -> A AC=2;AN=192;BQB=0.609965;DP=5036;DP4=2325,2408,30,40;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000397141;MQB=3.94749e-38;MQSB=0.00285061;RPB=0.991128;SGB=239.384;VDB=0.77041;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.3:8934073 chr03:008934073 0 W/8934073-8934073 FN3449-S SNP G -> A AC=1;AN=184;BQB=0.650719;DP=3448;DP4=1312,1913,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.22551e-12;MQSB=0.968603;RPB=0.989338;SGB=33.3622;VDB=0.720877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.3:8941166 chr03:008941166 0 W/8941166-8941166 FN3659-S SNP T -> A AC=1;AN=190;BQB=0.999713;DP=2708;DP4=1445,1097,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41028e-09;MQSB=0.856276;RPB=0.999995;SGB=80.9724;VDB=0.643194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T29S|270|LOC_Os03g16210|protein_coding|CODING|LOC_Os03g16210.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T29S|216|LOC_Os03g16210|protein_coding|CODING|LOC_Os03g16210.2|1|1) FN3746-S.SNP.3:8946347 chr03:008946347 0 W/8946347-8946347 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.512787;DP=2810;DP4=1420,1286,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41861e-08;MQSB=0.903766;RPB=0.707388;SGB=49.0954;VDB=0.0181341;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S196|263|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S196|268|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S111|183|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.4|3|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S71|143|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.5|3|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S196|271|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S196|213|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.6|4|1) FN3746-S.SNP.3:8946350 chr03:008946350 0 W/8946350-8946350 FN3746-S SNP T -> A AC=1;AN=190;BQB=0.986858;DP=2803;DP4=1401,1316,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.61332e-08;MQSB=0.967518;RPB=0.855956;SGB=32.5467;VDB=0.00873016;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R195|263|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R195|268|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R110|183|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.4|3|1),SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R70|143|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.5|3|1),SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R195|271|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R195|213|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.6|4|1) FN3746-S.SNP.3:8946351 chr03:008946351 0 W/8946351-8946351 FN3746-S SNP C -> A AC=1;AN=190;BQB=0.946056;DP=2785;DP4=1410,1286,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.4307e-08;MQSB=0.916496;RPB=0.508721;SGB=49.0954;VDB=0.0190538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R195L|263|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R195L|268|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R110L|183|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.4|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R70L|143|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.5|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R195L|271|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R195L|213|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.6|4|1) FN4133-S.SNP.3:8947256 chr03:008947256 0 W/8947256-8947256 FN4133-S SNP C -> A AC=1;AN=182;BQB=0.995091;DP=3268;DP4=1436,1590,9,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.56899e-10;MQSB=0.981712;RPB=0.222804;SGB=56.6929;VDB=0.255357;EFF=UTR_5_PRIME(MODIFIER||622||143|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.5|2|1),INTRON(MODIFIER||||271|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.1|2|1),INTRON(MODIFIER||||268|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.2|2|1),INTRON(MODIFIER||||263|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.3|2|1),INTRON(MODIFIER||||213|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.6|2|1),INTRON(MODIFIER||||183|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.4|1|1) FN3968-S.SNP.3:8947447 chr03:008947447 0 W/8947447-8947447 FN3968-S SNP C -> G AC=2;AN=168;BQB=0.899909;DP=2316;DP4=1138,1081,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.74851e-11;MQSB=0.911929;RPB=0.519943;SGB=96.481;VDB=0.878839;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R90P|271|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R90P|268|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R90P|263|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R90P|213|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.6|2|1),UTR_5_PRIME(MODIFIER||813||143|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.5|2|1),INTRON(MODIFIER||||183|LOC_Os03g16220|protein_coding|CODING|LOC_Os03g16220.4|1|1) FN3824-S.SNP.3:8952604 chr03:008952604 0 W/8952604-8952604 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.970935;DP=1395;DP4=741,538,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00016412;MQSB=0.181464;RPB=0.0866073;SGB=14.7784;VDB=0.462061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.3:8957800 chr03:008957800 0 W/8957800-8957800 FN2357 SNP T -> A AC=1;AN=192;BQB=0.729494;DP=4645;DP4=2319,2027,18,19;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00796555;MQB=1.42445e-09;MQSB=8.7553e-06;RPB=0.807405;SGB=-2.91736;VDB=0.95454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.3:8959175 chr03:008959175 0 W/8959175-8959175 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.958129;DP=4701;DP4=2297,2140,9,14;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0291427;MQB=0.940923;MQSB=7.97751e-07;RPB=0.683628;SGB=72.7161;VDB=0.974832;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.3:8964965 chr03:008964965 0 W/8964965-8964965 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.886241;DP=2929;DP4=1249,1569,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.21179e-08;MQSB=0.97166;RPB=0.585956;SGB=5.28054;VDB=0.996578;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A408|568|LOC_Os03g16260|protein_coding|CODING|LOC_Os03g16260.1|6|1) FN1217-S.SNP.3:8967717 chr03:008967717 0 W/8967717-8967717 FN1217-S Single Base Substitution G-A INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN4020-S.SNP.3:8972161 chr03:008972161 0 W/8972161-8972161 FN4020-S SNP A -> T AC=2;AN=168;BQB=0.938768;DP=2756;DP4=1134,1317,32,24;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00362845;MQB=7.06418e-16;MQSB=0.00036;RPB=0.760161;SGB=140.046;VDB=0.0318241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R89W|438|LOC_Os03g16280|protein_coding|CODING|LOC_Os03g16280.1|2|1) FN687-S.SNP.3:8974597 chr03:008974597 0 W/8974597-8974597 FN687-S Single Base Substitution C-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3667-S.SNP.3:8978205 chr03:008978205 0 W/8978205-8978205 FN3667-S SNP G -> A AC=2;AN=190;BQB=0.73443;DP=1702;DP4=629,1002,3,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.000231666;MQSB=0.293659;RPB=0.743847;SGB=58.2031;VDB=0.935097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.3:8979471 chr03:008979471 0 W/8979471-8979471 FN2535-S SNP G -> A AC=1;AN=198;BQB=0.997414;DP=3012;DP4=1349,1462,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.95697e-05;MQSB=0.0490189;RPB=0.732678;SGB=22.1736;VDB=0.256052;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.3:8990792 chr03:008990792 0 W/8990792-8990792 FN3637-S SNP G -> A AC=2;AN=190;BQB=0.990363;DP=1616;DP4=715,759,4,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.000583854;MQSB=0.849843;RPB=0.458536;SGB=30.8803;VDB=0.0663569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.3:8992475 chr03:008992475 0 W/8992475-8992475 FN3767-S SNP G -> T AC=2;AN=190;BQB=0.983921;DP=2917;DP4=1659,1082,16,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.9869e-10;MQSB=0.438964;RPB=0.853979;SGB=90.0802;VDB=0.928035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.3:8993190 chr03:008993190 0 W/8993190-8993190 FN3863-S SNP A -> G AC=1;AN=158;BQB=0.723517;DP=2375;DP4=1170,1125,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.43906e-05;MQSB=0.940602;RPB=0.606791;SGB=20.5959;VDB=0.288493;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.3:9004706 chr03:009004706 0 W/9004706-9004706 FN-143 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g16310 retrotransposon protein, putative, LINE subclass, expressed SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3499-S.SNP.3:9004988 chr03:009004988 0 W/9004988-9004988 FN3499-S SNP G -> A AC=1;AN=188;BQB=0.925071;DP=3262;DP4=1649,1537,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.48696e-05;MQSB=0.000767369;RPB=0.556296;SGB=48.979;VDB=0.189099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P417S|870|LOC_Os03g16310|protein_coding|CODING|LOC_Os03g16310.1|1|1) FN4090-S.SNP.3:9005469 chr03:009005469 0 W/9005469-9005469 FN4090-S SNP C -> A AC=1;AN=182;BQB=0.978595;DP=3700;DP4=1749,1871,9,14;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00027027;MQB=3.29558e-10;MQSB=0.0201634;RPB=0.8894;SGB=70.7363;VDB=0.275849;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P256|870|LOC_Os03g16310|protein_coding|CODING|LOC_Os03g16310.1|1|1) W313-1-1-1-1.SNP.3:9010315 chr03:009010315 0 W/9010315-9010315 W313-1-1-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN1521-S.SNP.3:9013114 chr03:009013114 0 W/9013114-9013114 FN1521-S Single Base Substitution C-A INTRON Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2653-S.SNP.3:9014695 chr03:009014695 0 W/9014695-9014695 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.972447;DP=4436;DP4=1971,2165,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20283e-13;MQSB=0.514222;RPB=0.283348;SGB=95.7111;VDB=0.345922;EFF=INTRON(MODIFIER||||527|LOC_Os03g16334|protein_coding|CODING|LOC_Os03g16334.1|1|1) FN918-S.SNP.3:9016469 chr03:009016469 0 W/9016469-9016469 FN918-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN4047-S.SNP.3:9016854 chr03:009016854 0 W/9016854-9016854 FN4047-S SNP G -> A AC=1;AN=168;BQB=0.942629;DP=2626;DP4=1229,1255,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.38958e-07;MQSB=0.784473;RPB=0.999499;SGB=27.8864;VDB=0.149309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.3:9018538 chr03:009018538 0 W/9018538-9018538 FN2329 SNP C -> A AC=1;AN=192;BQB=0.0289697;DP=4961;DP4=2379,2220,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01976e-14;MQSB=0.867203;RPB=0.932306;SGB=-78.8574;VDB=0.760177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.3:9025004 chr03:009025004 0 W/9025004-9025004 FN-248 Single Base Substitution C-A INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN_N1-130-1.SNP.3:9034175 chr03:009034175 0 W/9034175-9034175 FN_N1-130-1 Single Base Substitution G-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3468-S.SNP.3:9034279 chr03:009034279 0 W/9034279-9034279 FN3468-S SNP T -> C AC=1;AN=184;BQB=0.977014;DP=2894;DP4=1341,1365,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.18131e-14;MQSB=0.998796;RPB=0.420209;SGB=-11.5833;VDB=0.285797;EFF=INTRON(MODIFIER||||840|LOC_Os03g16369|protein_coding|CODING|LOC_Os03g16369.1|3|1),INTRON(MODIFIER||||840|LOC_Os03g16369|protein_coding|CODING|LOC_Os03g16369.2|3|1) FN3468-S.SNP.3:9045843 chr03:009045843 0 W/9045843-9045843 FN3468-S SNP A -> G AC=1;AN=184;BQB=0.99941;DP=3373;DP4=1579,1678,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.22278e-10;MQSB=0.996247;RPB=0.903145;SGB=25.7969;VDB=0.754445;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.3:9045918 chr03:009045918 0 W/9045918-9045918 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2317.SNP.3:9052380 chr03:009052380 0 W/9052380-9052380 FN2317 SNP C -> T AC=1;AN=192;BQB=0.0683635;DP=3896;DP4=2135,1494,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000256674;MQB=0.000506225;MQSB=0.963744;RPB=0.820503;SGB=25.5227;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.3:9053583 chr03:009053583 0 W/9053583-9053583 FN3676-S SNP C -> A AC=1;AN=190;BQB=0.999994;DP=2492;DP4=1272,1077,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48407e-06;MQSB=0.892844;RPB=0.455009;SGB=32.5467;VDB=0.484415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.3:9055667 chr03:009055667 0 W/9055667-9055667 FN1423-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1204-S.SNP.3:9056727 chr03:009056727 0 W/9056727-9056727 FN1204-S Single Base Substitution C-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN596-S.SNP.3:9064162 chr03:009064162 0 W/9064162-9064162 FN596-S Single Base Substitution C-T INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN-408.SNP.3:9065515 chr03:009065515 0 W/9065515-9065515 FN-408 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.3:9065515 chr03:009065515 0 W/9065515-9065515 FN408-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-408.SNP.3:9065516 chr03:009065516 0 W/9065516-9065516 FN-408 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.3:9065516 chr03:009065516 0 W/9065516-9065516 FN408-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g16430 RNA polymerase sigma factor, putative, expressed SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2299.SNP.3:9070902 chr03:009070902 0 W/9070902-9070902 FN2299 SNP A -> T AC=1;AN=192;BQB=0.724324;DP=5121;DP4=2479,2279,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.75541e-11;MQSB=0.84113;RPB=0.783105;SGB=54.0374;VDB=0.0819154;EFF=INTRON(MODIFIER||||817|LOC_Os03g16440|protein_coding|CODING|LOC_Os03g16440.1|3|1) FN868-S.SNP.3:9081815 chr03:009081815 0 W/9081815-9081815 FN868-S Single Base Substitution C-T INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3388-S.SNP.3:9090970 chr03:009090970 0 W/9090970-9090970 FN3388-S SNP G -> A AC=2;AN=184;BQB=0.140858;DP=2799;DP4=1310,1359,16,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00035727;MQB=3.80441e-11;MQSB=0.416309;RPB=0.151477;SGB=66.1455;VDB=0.25426;EFF=INTRON(MODIFIER||||322|LOC_Os03g16490|protein_coding|CODING|LOC_Os03g16490.1|3|1) FN2455.SNP.3:9091817 chr03:009091817 0 W/9091817-9091817 FN2455 SNP A -> G AC=1;AN=200;BQB=0.998219;DP=4872;DP4=2257,2325,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205255;MQB=4.16339e-10;MQSB=0.777779;RPB=0.852734;SGB=47.4799;VDB=0.287158;EFF=INTRON(MODIFIER||||322|LOC_Os03g16490|protein_coding|CODING|LOC_Os03g16490.1|2|1) FN957-S.SNP.3:9094057 chr03:009094057 0 W/9094057-9094057 FN957-S Single Base Substitution A-T INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN-240.SNP.3:9103162 chr03:009103162 0 W/9103162-9103162 FN-240 Single Base Substitution G-A INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2750-S.SNP.3:9105098 chr03:009105098 0 W/9105098-9105098 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.774302;DP=4839;DP4=2310,2154,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.57519e-09;MQSB=0.880076;RPB=0.587168;SGB=40.2696;VDB=0.123939;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.3:9105288 chr03:009105288 0 W/9105288-9105288 FN-279 Single Base Substitution G-A INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3918-S.SNP.3:9108693 chr03:009108693 0 W/9108693-9108693 FN3918-S SNP C -> T AC=2;AN=158;BQB=0.795213;DP=2482;DP4=1276,1120,8,11;HOB=0.024996;ICB=0.493752;MQ=43;MQ0F=0.0177276;MQB=0.457044;MQSB=0.46612;RPB=0.849522;SGB=77.6532;VDB=0.662762;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D1775N|2111|LOC_Os03g16530|protein_coding|CODING|LOC_Os03g16530.1|11|1) FN889-S.SNP.3:9112407 chr03:009112407 0 W/9112407-9112407 FN889-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g16530 retrotransposon protein, putative, unclassified, expressed SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN3691-S.SNP.3:9120538 chr03:009120538 0 W/9120538-9120538 FN3691-S SNP A -> T AC=1;AN=190;BQB=0.999999;DP=2517;DP4=1213,1211,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00238379;MQB=8.41777e-05;MQSB=0.152682;RPB=0.739056;SGB=30.8803;VDB=0.396463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.3:9121343 chr03:009121343 0 W/9121343-9121343 FN3388-S SNP G -> C AC=2;AN=184;BQB=0.97495;DP=3489;DP4=1651,1705,19,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00057323;MQB=2.4932e-21;MQSB=0.996242;RPB=0.197748;SGB=81.2762;VDB=0.105227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aCc|S70T|511|LOC_Os03g16540|protein_coding|CODING|LOC_Os03g16540.1|3|1) FN3606-S.SNP.3:9129552 chr03:009129552 0 W/9129552-9129552 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.835118;DP=2066;DP4=920,1060,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00629235;MQB=0.38628;MQSB=3.37151e-06;RPB=0.998146;SGB=53.6492;VDB=0.012447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.3:9131592 chr03:009131592 0 W/9131592-9131592 FN2360 SNP C -> T AC=2;AN=192;BQB=0.0903353;DP=4532;DP4=1994,2159,12,9;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.94062e-08;MQSB=0.962361;RPB=0.981466;SGB=-11.9469;VDB=0.420308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.3:9151197 chr03:009151197 0 W/9151197-9151197 FN3789-S SNP T -> G AC=1;AN=190;BQB=0.83598;DP=2427;DP4=1030,1300,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60587e-08;MQSB=0.9999;RPB=0.571017;SGB=36.1006;VDB=0.696823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.3:9158288 chr03:009158288 0 W/9158288-9158288 FN1029-S Single Base Substitution C-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN803-S.SNP.3:9166812 chr03:009166812 0 W/9166812-9166812 FN803-S Single Base Substitution C-T INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2667-S.SNP.3:9184654 chr03:009184654 0 W/9184654-9184654 FN2667-S SNP A -> G AC=1;AN=200;BQB=0.847311;DP=6179;DP4=2732,3121,13,9;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.200518;MQB=0.0183534;MQSB=0.000198684;RPB=0.941875;SGB=42.5108;VDB=0.540996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-S.SNP.3:9184770 chr03:009184770 0 W/9184770-9184770 FN1136-S Single Base Substitution A-T INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3430-S.SNP.3:9187005 chr03:009187005 0 W/9187005-9187005 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.962717;DP=3655;DP4=1791,1739,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0500684;MQB=0.427235;MQSB=0.805946;RPB=0.857705;SGB=60.4004;VDB=0.342935;EFF=INTRON(MODIFIER||||126|LOC_Os03g16650|protein_coding|CODING|LOC_Os03g16650.1|1|1) FN1290-S.SNP.3:9189138 chr03:009189138 0 W/9189138-9189138 FN1290-S Single Base Substitution G-A INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN2788-S.SNP.3:9191095 chr03:009191095 0 W/9191095-9191095 FN2788-S SNP T -> A AC=1;AN=198;BQB=0.962297;DP=3835;DP4=1932,1712,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2094e-09;MQSB=0.673899;RPB=0.939379;SGB=63.3342;VDB=0.863526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.3:9201226 chr03:009201226 0 W/9201226-9201226 FN1335-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2272-S.SNP.3:9201235 chr03:009201235 0 W/9201235-9201235 FN2272-S SNP A -> T AC=2;AN=190;BQB=0.584662;DP=3170;DP4=1252,1258,21,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000315457;MQB=2.77314e-12;MQSB=0.419028;RPB=0.980287;SGB=-4.35995;VDB=0.373966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.3:9202791 chr03:009202791 0 W/9202791-9202791 FN3769-S SNP A -> C AC=1;AN=190;BQB=0.998161;DP=2808;DP4=1219,1474,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.45529e-08;MQSB=0.852676;RPB=0.937725;SGB=39.6545;VDB=0.550318;EFF=INTRON(MODIFIER||||283|LOC_Os03g16670|protein_coding|CODING|LOC_Os03g16670.1|1|1) FN1427-S.SNP.3:9206734 chr03:009206734 0 W/9206734-9206734 FN1427-S Single Base Substitution G-T INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2362.SNP.3:9227279 chr03:009227279 0 W/9227279-9227279 FN2362 SNP A -> G AC=1;AN=192;BQB=0.768416;DP=5053;DP4=2264,2428,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197902;MQB=2.22762e-11;MQSB=0.994101;RPB=0.915204;SGB=54.0374;VDB=0.440254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.3:9231947 chr03:009231947 0 W/9231947-9231947 FN2489 SNP G -> T AC=1;AN=200;BQB=0.91472;DP=4188;DP4=1652,2325,2,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.61146e-07;MQSB=0.995473;RPB=0.900097;SGB=11.2488;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.3:9233155 chr03:009233155 0 W/9233155-9233155 FN-110 Single Base Substitution G-A INTERGENIC HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1497-S.SNP.3:9233155 chr03:009233155 0 W/9233155-9233155 FN1497-S Single Base Substitution G-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2243-S.SNP.3:9233155 chr03:009233155 0 W/9233155-9233155 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.479517;DP=4066;DP4=2152,1566,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000245942;MQB=1.00219e-05;MQSB=0.983571;RPB=0.939323;SGB=-14.8836;VDB=0.912922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.3:9233155 chr03:009233155 0 W/9233155-9233155 FN2634-S SNP G -> A AC=2;AN=200;BQB=0.984018;DP=4164;DP4=2130,1743,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.27289e-23;MQSB=0.930215;RPB=0.95426;SGB=46.4088;VDB=0.162129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.3:9238544 chr03:009238544 0 W/9238544-9238544 FN2479 SNP T -> C AC=1;AN=200;BQB=0.579777;DP=4957;DP4=2099,2522,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18582e-12;MQSB=0.446041;RPB=0.760657;SGB=65.5058;VDB=0.212335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.3:9239304 chr03:009239304 0 W/9239304-9239304 FN2354 SNP G -> C AC=1;AN=192;BQB=0.74931;DP=5083;DP4=2175,2676,5,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7101e-11;MQSB=0.341202;RPB=0.972067;SGB=39.1713;VDB=0.69768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.3:9239304 chr03:009239304 0 W/9239304-9239304 FN2465 SNP G -> C AC=2;AN=200;BQB=0.98055;DP=4926;DP4=2066,2590,29,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.79303e-28;MQSB=0.762656;RPB=0.941552;SGB=170.056;VDB=0.564408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.3:9239304 chr03:009239304 0 W/9239304-9239304 FN3506-S SNP G -> C AC=2;AN=188;BQB=0.866291;DP=3166;DP4=1191,1882,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.38439e-09;MQSB=0.993366;RPB=0.658051;SGB=33.7061;VDB=0.296098;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.3:9239304 chr03:009239304 0 W/9239304-9239304 FN662-S Single Base Substitution G-C INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN923-S.SNP.3:9239459 chr03:009239459 0 W/9239459-9239459 FN923-S Single Base Substitution A-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN3795-S.SNP.3:9241964 chr03:009241964 0 W/9241964-9241964 FN3795-S SNP C -> T AC=1;AN=190;BQB=0.998726;DP=2208;DP4=1084,1004,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70265e-05;MQSB=0.769628;RPB=0.0448484;SGB=39.9877;VDB=0.446641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-M.SNP.3:9247374 chr03:009247374 0 W/9247374-9247374 FN1554-M SNP A -> G AC=1;AN=190;BQB=0.0380876;DP=2892;DP4=1536,875,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000345781;MQB=6.94618e-05;MQSB=5.36244e-34;RPB=0.955591;SGB=28.9928;VDB=0.00456859;EFF=UTR_5_PRIME(MODIFIER||1224||692|LOC_Os03g16700|protein_coding|CODING|LOC_Os03g16700.1|1|1) FN-356.SNP.3:9256899 chr03:009256899 0 W/9256899-9256899 FN-356 Single Base Substitution A-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2674-S.SNP.3:9268602 chr03:009268602 0 W/9268602-9268602 FN2674-S SNP A -> T AC=1;AN=200;BQB=0.76441;DP=5050;DP4=2414,2446,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05725e-14;MQSB=0.903714;RPB=0.598896;SGB=118.737;VDB=0.661432;EFF=INTRON(MODIFIER||||310|LOC_Os03g16730|protein_coding|CODING|LOC_Os03g16730.1|3|1) FN3821-S.SNP.3:9275067 chr03:009275067 0 W/9275067-9275067 FN3821-S SNP C -> G AC=1;AN=190;BQB=0.685557;DP=3492;DP4=1644,1730,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.45738e-10;MQSB=0.769644;RPB=0.982419;SGB=80.9724;VDB=0.25227;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.3:9284239 chr03:009284239 0 W/9284239-9284239 FN3662-S SNP T -> G AC=1;AN=190;BQB=0.972503;DP=2683;DP4=1188,1389,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.21157e-05;MQSB=0.99999;RPB=0.907405;SGB=26.3271;VDB=0.637622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.3:9292431 chr03:009292431 0 W/9292431-9292431 FN3632-S SNP A -> T AC=1;AN=190;BQB=0.96386;DP=2924;DP4=1424,1389,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.89287e-07;MQSB=0.744833;RPB=0.482902;SGB=32.5467;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.3:9299635 chr03:009299635 0 W/9299635-9299635 FN4078-S SNP A -> G AC=1;AN=182;BQB=0.65734;DP=3660;DP4=1440,2021,9,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.14697e-08;MQSB=0.123311;RPB=0.746761;SGB=-16.8883;VDB=0.879517;EFF=INTRON(MODIFIER||||465|LOC_Os03g16780|protein_coding|CODING|LOC_Os03g16780.1|1|1) FN2611-S.SNP.3:9300637 chr03:009300637 0 W/9300637-9300637 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.80602;DP=4912;DP4=2494,2155,20,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203583;MQB=4.17306e-23;MQSB=0.971449;RPB=0.342867;SGB=164.789;VDB=0.138099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.3:9303660 chr03:009303660 0 W/9303660-9303660 FN2765-S SNP C -> T AC=2;AN=198;BQB=0.49479;DP=4182;DP4=2350,1556,39,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.02696e-35;MQSB=0.999132;RPB=0.994119;SGB=278.313;VDB=0.234296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.3:9307335 chr03:009307335 0 W/9307335-9307335 FN3979-S SNP A -> G AC=1;AN=168;BQB=0.705432;DP=3122;DP4=1207,1691,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.28667e-12;MQSB=0.985397;RPB=0.516617;SGB=22.7913;VDB=0.891929;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.3:9318748 chr03:009318748 0 W/9318748-9318748 FN-134 Single Base Substitution C-A INTERGENIC HOMO SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN1666-S.SNP.3:9319193 chr03:009319193 0 W/9319193-9319193 FN1666-S SNP A -> G AC=1;AN=188;BQB=0.64884;DP=3441;DP4=1771,1617,6,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.35206e-10;MQSB=0.922311;RPB=0.947115;SGB=-40.1048;VDB=0.851512;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.3:9319195 chr03:009319195 0 W/9319195-9319195 FN1528-S Single Base Substitution A-C INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN-255.SNP.3:9326362 chr03:009326362 0 W/9326362-9326362 FN-255 Single Base Substitution A-G INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN_769-4-1.SNP.3:9327567 chr03:009327567 0 W/9327567-9327567 FN_769-4-1 Single Base Substitution G-A HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN758-S.SNP.3:9346170 chr03:009346170 0 W/9346170-9346170 FN758-S Single Base Substitution A-G INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN3639-S.SNP.3:9354991 chr03:009354991 0 W/9354991-9354991 FN3639-S SNP T -> A AC=1;AN=190;BQB=0.999068;DP=2787;DP4=1270,1324,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3636e-05;MQSB=0.868366;RPB=0.429299;SGB=39.9877;VDB=0.754296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.3:9355076 chr03:009355076 0 W/9355076-9355076 FN3434-S SNP A -> T AC=2;AN=184;BQB=0.956134;DP=2445;DP4=1243,1079,14,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.68922e-16;MQSB=0.998417;RPB=0.993214;SGB=121.091;VDB=0.13734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.3:9357165 chr03:009357165 0 W/9357165-9357165 FN2274-S SNP G -> A AC=2;AN=190;BQB=0.505914;DP=1628;DP4=1478,14,27,0;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48618e-12;MQSB=0.917251;RPB=0.343673;SGB=77.3975;VDB=0.140898;EFF=INTERGENIC(MODIFIER||||||||||1) FN4145-S.SNP.3:9358004 chr03:009358004 0 W/9358004-9358004 FN4145-S SNP G -> A AC=2;AN=170;BQB=0.797229;DP=1636;DP4=838,710,9,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.99384e-11;MQSB=0.773081;RPB=0.698327;SGB=34.5398;VDB=0.840279;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.3:9360203 chr03:009360203 0 W/9360203-9360203 FN1690-S SNP A -> G AC=1;AN=188;BQB=0.429071;DP=1594;DP4=851,690,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00936203;MQSB=0.989516;RPB=0.867897;SGB=39.8925;VDB=0.840211;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S159P|403|LOC_Os03g16850|protein_coding|CODING|LOC_Os03g16850.1|2|1) FN1179-S.SNP.3:9361608 chr03:009361608 0 W/9361608-9361608 FN1179-S Single Base Substitution A-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN864-S.SNP.3:9374464 chr03:009374464 0 W/9374464-9374464 FN864-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g16870 expressed protein SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3657-S.SNP.3:9377516 chr03:009377516 0 W/9377516-9377516 FN3657-S SNP A -> C AC=1;AN=190;BQB=0.498386;DP=2933;DP4=1332,1400,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.54974e-07;MQSB=0.988119;RPB=0.0858623;SGB=31.3213;VDB=0.0951013;EFF=UTR_3_PRIME(MODIFIER||9||81|LOC_Os03g16874|protein_coding|CODING|LOC_Os03g16874.1|3|1),UTR_3_PRIME(MODIFIER||9||81|LOC_Os03g16874|protein_coding|CODING|LOC_Os03g16874.2|4|1),UTR_3_PRIME(MODIFIER||9||81|LOC_Os03g16874|protein_coding|CODING|LOC_Os03g16874.3|3|1) FN3534-S.SNP.3:9380487 chr03:009380487 0 W/9380487-9380487 FN3534-S SNP C -> G AC=2;AN=188;BQB=0.77246;DP=2606;DP4=1161,1341,10,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.11228e-13;MQSB=0.991081;RPB=0.996438;SGB=94.4119;VDB=0.723218;EFF=INTRON(MODIFIER||||560|LOC_Os03g16880|protein_coding|CODING|LOC_Os03g16880.1|1|1) FN2454.SNP.3:9382046 chr03:009382046 0 W/9382046-9382046 FN2454 SNP T -> C AC=1;AN=200;BQB=0.560983;DP=5022;DP4=1801,2687,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33554e-05;MQSB=0.988439;RPB=0.812943;SGB=-15.5309;VDB=0.328077;EFF=INTRON(MODIFIER||||560|LOC_Os03g16880|protein_coding|CODING|LOC_Os03g16880.1|1|1) FN1309-S.SNP.3:9389132 chr03:009389132 0 W/9389132-9389132 FN1309-S Single Base Substitution C-A INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN593-S.SNP.3:9402706 chr03:009402706 0 W/9402706-9402706 FN593-S Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN593-S.SNP.3:9402707 chr03:009402707 0 W/9402707-9402707 FN593-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1456-S.SNP.3:9409857 chr03:009409857 0 W/9409857-9409857 FN1456-S Single Base Substitution T-C INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2451.SNP.3:9414397 chr03:009414397 0 W/9414397-9414397 FN2451 SNP T -> C AC=1;AN=200;BQB=0.226581;DP=4983;DP4=2279,2436,15,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200682;MQB=4.14034e-16;MQSB=0.0229639;RPB=0.987733;SGB=155.578;VDB=0.191467;EFF=INTRON(MODIFIER||||653|LOC_Os03g16920|protein_coding|CODING|LOC_Os03g16920.1|1|1) FN3652-S.SNP.3:9415769 chr03:009415769 0 W/9415769-9415769 FN3652-S SNP C -> T AC=1;AN=190;BQB=0.892767;DP=2708;DP4=1431,1155,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.2766e-05;MQSB=0.986217;RPB=0.882998;SGB=44.5415;VDB=0.549015;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K60|653|LOC_Os03g16920|protein_coding|CODING|LOC_Os03g16920.1|1|1) FN1660-S.SNP.3:9416377 chr03:009416377 0 W/9416377-9416377 FN1660-S Single Base Substitution G-C INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1118-S.SNP.3:9416477 chr03:009416477 0 W/9416477-9416477 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN_830-6-1.SNP.3:9420413 chr03:009420413 0 W/9420413-9420413 FN_830-6-1 Single Base Substitution A-G Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN-222.SNP.3:9420561 chr03:009420561 0 W/9420561-9420561 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-298.SNP.3:9424727 chr03:009424727 0 W/9424727-9424727 FN-298 Single Base Substitution T-C INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2246-S.SNP.3:9425032 chr03:009425032 0 W/9425032-9425032 FN2246-S SNP C -> T AC=2;AN=190;BQB=0.345051;DP=4720;DP4=1992,2369,21,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.05284e-23;MQSB=0.933533;RPB=0.309882;SGB=172.05;VDB=0.5491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.3:9425033 chr03:009425033 0 W/9425033-9425033 FN2246-S SNP C -> A AC=2;AN=190;BQB=0.838632;DP=4735;DP4=1989,2415,24,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.19812e-24;MQSB=0.908305;RPB=0.148011;SGB=95.1683;VDB=0.503302;EFF=INTERGENIC(MODIFIER||||||||||1) FN-406.SNP.3:9429633 chr03:009429633 0 W/9429633-9429633 FN-406 Single Base Substitution C-T INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN406-S.SNP.3:9429633 chr03:009429633 0 W/9429633-9429633 FN406-S Single Base Substitution C-T INTERGENIC HOMO SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN-256.SNP.3:9440552 chr03:009440552 0 W/9440552-9440552 FN-256 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2779-S.SNP.3:9444212 chr03:009444212 0 W/9444212-9444212 FN2779-S SNP G -> T AC=1;AN=198;BQB=0.358569;DP=3819;DP4=1673,1575,19,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.65275e-13;MQSB=0.00871286;RPB=0.642695;SGB=-105.06;VDB=0.301221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.3:9459649 chr03:009459649 0 W/9459649-9459649 FN2731-S SNP T -> A AC=2;AN=200;BQB=0.986725;DP=4793;DP4=2177,2353,25,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.68885e-28;MQSB=0.805496;RPB=0.790109;SGB=155.635;VDB=0.687644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.3:9459650 chr03:009459650 0 W/9459650-9459650 FN2731-S SNP T -> A AC=2;AN=200;BQB=0.871131;DP=4773;DP4=2146,2369,25,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.72541e-28;MQSB=0.724449;RPB=0.478644;SGB=110.245;VDB=0.643391;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.3:9465642 chr03:009465642 0 W/9465642-9465642 FN869-S Single Base Substitution A-C INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2281.SNP.3:9466533 chr03:009466533 0 W/9466533-9466533 FN2281 SNP C -> A AC=1;AN=192;BQB=0.739303;DP=4849;DP4=2190,2325,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.10884e-12;MQSB=0.815479;RPB=0.596616;SGB=18.3052;VDB=0.379914;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.3:9466602 chr03:009466602 0 W/9466602-9466602 FN-106 Single Base Substitution C-A INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3849-S.SNP.3:9468593 chr03:009468593 0 W/9468593-9468593 FN3849-S SNP C -> T AC=2;AN=158;BQB=0.993914;DP=2011;DP4=883,957,17,11;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.05502e-12;MQSB=0.70898;RPB=0.994068;SGB=84.6152;VDB=0.498066;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.3:9470125 chr03:009470125 0 W/9470125-9470125 FN337-S Single Base Substitution A-G INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3806-S.SNP.3:9470499 chr03:009470499 0 W/9470499-9470499 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.878859;DP=2710;DP4=1018,1569,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02824e-06;MQSB=0.999739;RPB=0.998181;SGB=32.5467;VDB=0.47502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.3:9475940 chr03:009475940 0 W/9475940-9475940 FN1568-S Single Base Substitution T-C INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN3494-S.SNP.3:9477253 chr03:009477253 0 W/9477253-9477253 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.93618;DP=2742;DP4=1367,1291,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83378e-08;MQSB=0.982713;RPB=0.223476;SGB=62.3078;VDB=0.207007;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.3:9490886 chr03:009490886 0 W/9490886-9490886 FN781-S Single Base Substitution G-T INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN445-S.SNP.3:9494130 chr03:009494130 0 W/9494130-9494130 FN445-S Single Base Substitution C-T INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN821-S.SNP.3:9505685 chr03:009505685 0 W/9505685-9505685 FN821-S Single Base Substitution A-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN2657-S.SNP.3:9517651 chr03:009517651 0 W/9517651-9517651 FN2657-S SNP A -> T AC=2;AN=200;BQB=0.725746;DP=5407;DP4=2595,2572,29,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.55809e-38;MQSB=0.985741;RPB=0.754014;SGB=216.923;VDB=0.869092;EFF=INTRON(MODIFIER||||389|LOC_Os03g17130|protein_coding|CODING|LOC_Os03g17130.1|3|1) FN2650-S.SNP.3:9518707 chr03:009518707 0 W/9518707-9518707 FN2650-S SNP T -> G AC=2;AN=200;BQB=0.849257;DP=4769;DP4=2213,2315,10,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29518e-13;MQSB=0.942356;RPB=0.482082;SGB=91.1059;VDB=0.219548;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.3:9520821 chr03:009520821 0 W/9520821-9520821 FN-371 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g17140 expressed protein SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN2308.SNP.3:9525515 chr03:009525515 0 W/9525515-9525515 FN2308 SNP T -> A AC=1;AN=192;BQB=0.937774;DP=4977;DP4=1806,2040,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.81154e-11;MQSB=0.900954;RPB=0.957846;SGB=-67.3721;VDB=0.27927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D82V|191|LOC_Os03g17150|protein_coding|CODING|LOC_Os03g17150.1|1|1) FN3665-S.SNP.3:9527691 chr03:009527691 0 W/9527691-9527691 FN3665-S SNP T -> G AC=2;AN=190;BQB=0.400559;DP=2790;DP4=1150,1475,32,41;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.62905e-35;MQSB=0.980254;RPB=0.997543;SGB=315.878;VDB=0.105296;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.3:9529766 chr03:009529766 0 W/9529766-9529766 FN4234-S SNP T -> C AC=1;AN=170;BQB=0.912833;DP=2787;DP4=1239,1486,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.0266e-06;MQSB=0.997211;RPB=0.79566;SGB=61.2001;VDB=0.728756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.3:9532892 chr03:009532892 0 W/9532892-9532892 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.711355;DP=4778;DP4=2284,2231,12,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000209293;MQB=8.84016e-12;MQSB=0.649543;RPB=0.652011;SGB=91.1059;VDB=0.258655;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.3:9533521 chr03:009533521 0 W/9533521-9533521 FN2411 SNP G -> A AC=1;AN=200;BQB=0.929966;DP=4392;DP4=2060,2070,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.26488e-09;MQSB=0.886818;RPB=0.941553;SGB=21.6694;VDB=0.142558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.3:9543154 chr03:009543154 0 W/9543154-9543154 FN2340 SNP T -> A AC=1;AN=192;BQB=0.0832635;DP=5017;DP4=2402,2376,8,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.40934e-12;MQSB=0.393921;RPB=0.773772;SGB=44.3;VDB=0.59738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.3:9547301 chr03:009547301 0 W/9547301-9547301 FN1012-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g17164 kinesin-related protein, putative, expressed SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3852-S.SNP.3:9547794 chr03:009547794 0 W/9547794-9547794 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.999394;DP=2274;DP4=1079,1049,21,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000439754;MQB=2.08489e-17;MQSB=0.752718;RPB=0.59006;SGB=130.087;VDB=0.424661;EFF=INTRON(MODIFIER||||700|LOC_Os03g17164|protein_coding|CODING|LOC_Os03g17164.1|8|1) FN3710-S.SNP.3:9548594 chr03:009548594 0 W/9548594-9548594 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.972716;DP=3146;DP4=1551,1478,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.45108e-08;MQSB=0.930231;RPB=0.998796;SGB=49.0954;VDB=0.434979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S374L|700|LOC_Os03g17164|protein_coding|CODING|LOC_Os03g17164.1|12|1) FN453-S.SNP.3:9554405 chr03:009554405 0 W/9554405-9554405 FN453-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g17170 zinc finger, C3HC4 type domain containing protein, expressed SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN502-S.SNP.3:9554405 chr03:009554405 0 W/9554405-9554405 FN502-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g17170 zinc finger, C3HC4 type domain containing protein, expressed SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN3375-S.SNP.3:9556922 chr03:009556922 0 W/9556922-9556922 FN3375-S SNP A -> C AC=2;AN=184;BQB=0.911679;DP=3049;DP4=1219,1681,15,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.33704e-15;MQSB=0.9789;RPB=0.826598;SGB=56.0583;VDB=0.635586;EFF=SPLICE_SITE_REGION(LOW||||232|LOC_Os03g17174|protein_coding|CODING|LOC_Os03g17174.1|7|1),SPLICE_SITE_REGION(LOW||||172|LOC_Os03g17174|protein_coding|CODING|LOC_Os03g17174.2|7|1),INTRON(MODIFIER||||232|LOC_Os03g17174|protein_coding|CODING|LOC_Os03g17174.1|7|1),INTRON(MODIFIER||||172|LOC_Os03g17174|protein_coding|CODING|LOC_Os03g17174.2|7|1) FN1537-S.SNP.3:9569509 chr03:009569509 0 W/9569509-9569509 FN1537-S Single Base Substitution A-G INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2602-S.SNP.3:9575218 chr03:009575218 0 W/9575218-9575218 FN2602-S SNP C -> A AC=2;AN=198;BQB=0.484075;DP=4048;DP4=2058,1787,14,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.01408e-12;MQSB=0.891603;RPB=0.999998;SGB=95.5;VDB=0.413078;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.3:9579451 chr03:009579451 0 W/9579451-9579451 FN-61 Single Base Substitution C-T INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2662-S.SNP.3:9579820 chr03:009579820 0 W/9579820-9579820 FN2662-S SNP G -> T AC=1;AN=200;BQB=0.343097;DP=5011;DP4=2147,2626,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.25952e-12;MQSB=0.977243;RPB=0.958256;SGB=77.2904;VDB=0.639798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.3:9580638 chr03:009580638 0 W/9580638-9580638 FN2345 SNP C -> A AC=1;AN=192;BQB=0.0772173;DP=4972;DP4=2356,2238,22,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.57635e-14;MQSB=0.787959;RPB=0.67901;SGB=-108.11;VDB=0.365889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.3:9580640 chr03:009580640 0 W/9580640-9580640 FN2345 SNP T -> C AC=1;AN=192;BQB=0.0636644;DP=4966;DP4=2309,2265,19,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.05279e-13;MQSB=0.91006;RPB=0.833884;SGB=-145.104;VDB=0.393717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.3:9581519 chr03:009581519 0 W/9581519-9581519 FN3347-S SNP G -> C AC=1;AN=184;BQB=0.986913;DP=3042;DP4=1678,1247,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.57652e-06;MQSB=0.993948;RPB=0.975309;SGB=44.2207;VDB=0.960008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.3:9585465 chr03:009585465 0 W/9585465-9585465 FN1099-S Single Base Substitution G-T INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN_809-6-1.SNP.3:9586779 chr03:009586779 0 W/9586779-9586779 FN_809-6-1 Single Base Substitution C-T Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN3917-S.SNP.3:9590162 chr03:009590162 0 W/9590162-9590162 FN3917-S SNP T -> G AC=1;AN=158;BQB=0.484305;DP=2357;DP4=1188,867,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.09009e-08;MQSB=0.790717;RPB=0.96464;SGB=-112.882;VDB=0.356761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.3:9593595 chr03:009593595 0 W/9593595-9593595 FN1577-S Single Base Substitution C-T INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2417.SNP.3:9597053 chr03:009597053 0 W/9597053-9597053 FN2417 SNP T -> A AC=1;AN=200;BQB=0.825931;DP=5111;DP4=2505,2308,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.19415e-14;MQSB=0.599169;RPB=0.560323;SGB=95.7111;VDB=0.622983;EFF=INTRON(MODIFIER||||1057|LOC_Os03g17210|protein_coding|CODING|LOC_Os03g17210.1|3|1),INTRON(MODIFIER||||976|LOC_Os03g17210|protein_coding|CODING|LOC_Os03g17210.2|2|1) FN601-S.SNP.3:9607356 chr03:009607356 0 W/9607356-9607356 FN601-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g17240 ankyrin repeat-containing protein, putative, expressed SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2698-S.SNP.3:9614084 chr03:009614084 0 W/9614084-9614084 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.77911;DP=4916;DP4=2643,2074,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.27581e-09;MQSB=0.998639;RPB=0.645198;SGB=36.6644;VDB=0.330822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.3:9614481 chr03:009614481 0 W/9614481-9614481 FN2681-S SNP T -> A AC=1;AN=200;BQB=0.829149;DP=5178;DP4=2760,2226,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27287e-14;MQSB=0.70561;RPB=0.708922;SGB=-7.6637;VDB=0.0808454;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.3:9623973 chr03:009623973 0 W/9623973-9623973 FN1211-S Single Base Substitution T-C SPLICE_SITE_REGION HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1102-S.SNP.3:9631614 chr03:009631614 0 W/9631614-9631614 FN1102-S Single Base Substitution C-T INTRON HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3517-S.SNP.3:9634050 chr03:009634050 0 W/9634050-9634050 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.973553;DP=3738;DP4=1711,1903,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.73444e-07;MQSB=0.840769;RPB=0.843683;SGB=39.8925;VDB=0.272308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D347N|843|LOC_Os03g17300|protein_coding|CODING|LOC_Os03g17300.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D347N|839|LOC_Os03g17300|protein_coding|CODING|LOC_Os03g17300.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D347N|839|LOC_Os03g17300|protein_coding|CODING|LOC_Os03g17300.4|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D347N|839|LOC_Os03g17300|protein_coding|CODING|LOC_Os03g17300.2|1|1),UTR_3_PRIME(MODIFIER||2161||1062|LOC_Os03g17310|protein_coding|CODING|LOC_Os03g17310.1|8|1) FN737-S.SNP.3:9640158 chr03:009640158 0 W/9640158-9640158 FN737-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN2758-S.SNP.3:9642635 chr03:009642635 0 W/9642635-9642635 FN2758-S SNP C -> G AC=2;AN=200;BQB=0.991167;DP=4600;DP4=2211,2059,13,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.87443e-15;MQSB=0.954943;RPB=0.116354;SGB=109.527;VDB=0.0690612;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.3:9643239 chr03:009643239 0 W/9643239-9643239 FN1505-S Single Base Substitution T-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN4188-S.SNP.3:9643743 chr03:009643743 0 W/9643743-9643743 FN4188-S SNP T -> A AC=1;AN=170;BQB=0.991709;DP=2489;DP4=1150,1238,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.25522e-13;MQSB=0.985634;RPB=0.895572;SGB=87.856;VDB=0.621695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.3:9643894 chr03:009643894 0 W/9643894-9643894 FN2289 SNP T -> A AC=1;AN=192;BQB=0.65766;DP=4863;DP4=2462,2102,18,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.40051e-15;MQSB=0.880997;RPB=0.410976;SGB=51.9931;VDB=0.177941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.3:9649263 chr03:009649263 0 W/9649263-9649263 FN1334-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN937-S.SNP.3:9661447 chr03:009661447 0 W/9661447-9661447 FN937-S Single Base Substitution A-T INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2285.SNP.3:9675431 chr03:009675431 0 W/9675431-9675431 FN2285 SNP C -> A AC=1;AN=192;BQB=0.866886;DP=4485;DP4=2247,1981,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02826e-08;MQSB=0.996087;RPB=0.297617;SGB=76.5965;VDB=0.0784512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.3:9675431 chr03:009675431 0 W/9675431-9675431 FN3399-S SNP C -> A AC=1;AN=184;BQB=0.997761;DP=3140;DP4=1569,1477,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88077e-05;MQSB=0.809582;RPB=0.787202;SGB=39.699;VDB=0.253952;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.3:9688704 chr03:009688704 0 W/9688704-9688704 FN467-S Single Base Substitution G-C INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2289.SNP.3:9689623 chr03:009689623 0 W/9689623-9689623 FN2289 SNP A -> G AC=1;AN=192;BQB=0.907637;DP=4242;DP4=1946,1298,17,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.42104e-14;MQSB=0.762291;RPB=0.998405;SGB=-350.262;VDB=0.711949;EFF=INTERGENIC(MODIFIER||||||||||1) FN-33.SNP.3:9690927 chr03:009690927 0 W/9690927-9690927 FN-33 Single Base Substitution T-A INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN2664-S.SNP.3:9690927 chr03:009690927 0 W/9690927-9690927 FN2664-S SNP T -> A AC=2;AN=200;BQB=0.543392;DP=5071;DP4=2284,2489,29,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.89092e-35;MQSB=0.982043;RPB=0.852533;SGB=261.497;VDB=0.442558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.3:9690927 chr03:009690927 0 W/9690927-9690927 FN3934-S SNP T -> A AC=2;AN=158;BQB=0.682933;DP=2392;DP4=1074,1232,17,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.11566e-10;MQSB=0.862664;RPB=0.125903;SGB=99.5005;VDB=0.0075869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.3:9693514 chr03:009693514 0 W/9693514-9693514 FN2652-S SNP C -> T AC=2;AN=200;BQB=0.534861;DP=5213;DP4=2482,2364,33,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.32714e-29;MQSB=0.965493;RPB=0.746464;SGB=138.902;VDB=0.442704;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.3:9696503 chr03:009696503 0 W/9696503-9696503 FN4039-S SNP G -> A AC=1;AN=168;BQB=0.979973;DP=2773;DP4=1302,1361,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53397e-06;MQSB=0.937568;RPB=0.895157;SGB=38.8805;VDB=0.656326;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.3:9704988 chr03:009704988 0 W/9704988-9704988 FN4128-S SNP G -> T AC=1;AN=182;BQB=0.96818;DP=2888;DP4=1564,1253,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.44196e-09;MQSB=0.99103;RPB=0.996755;SGB=18.1224;VDB=0.062858;EFF=INTRON(MODIFIER||||238|LOC_Os03g17450|protein_coding|CODING|LOC_Os03g17450.1|2|1) FN673-S.SNP.3:9704988 chr03:009704988 0 W/9704988-9704988 FN673-S Single Base Substitution G-T INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1176-S.SNP.3:9710727 chr03:009710727 0 W/9710727-9710727 FN1176-S Single Base Substitution A-G INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN890-S.SNP.3:9715336 chr03:009715336 0 W/9715336-9715336 FN890-S Single Base Substitution A-G INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN894-S.SNP.3:9729442 chr03:009729442 0 W/9729442-9729442 FN894-S Single Base Substitution A-G INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN894-S.SNP.3:9729445 chr03:009729445 0 W/9729445-9729445 FN894-S Single Base Substitution A-T INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2411.SNP.3:9731374 chr03:009731374 0 W/9731374-9731374 FN2411 SNP T -> A AC=1;AN=200;BQB=0.996101;DP=4910;DP4=2509,2107,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.64586e-09;MQSB=0.969099;RPB=0.990939;SGB=26.8797;VDB=0.282545;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K517*|598|LOC_Os03g17510|protein_coding|CODING|LOC_Os03g17510.1|1|1) FN1728-S.SNP.3:9740516 chr03:009740516 0 W/9740516-9740516 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.0669194;DP=2260;DP4=1108,1101,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.150885;MQB=0.0438536;MQSB=8.91453e-31;RPB=0.928436;SGB=-107.522;VDB=0.4664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.3:9744946 chr03:009744946 0 W/9744946-9744946 FN1065-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1643-S.SNP.3:9747761 chr03:009747761 0 W/9747761-9747761 FN1643-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN3731-S.SNP.3:9768688 chr03:009768688 0 W/9768688-9768688 FN3731-S SNP A -> T AC=1;AN=190;BQB=0.996093;DP=1953;DP4=1017,717,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3325e-05;MQSB=0.637817;RPB=0.991826;SGB=-50.1963;VDB=0.705512;EFF=UTR_5_PRIME(MODIFIER||969||767|LOC_Os03g17570|protein_coding|CODING|LOC_Os03g17570.1|1|1),UTR_5_PRIME(MODIFIER||969||745|LOC_Os03g17570|protein_coding|CODING|LOC_Os03g17570.4|1|1),UTR_5_PRIME(MODIFIER||969||533|LOC_Os03g17570|protein_coding|CODING|LOC_Os03g17570.5|1|1),UTR_5_PRIME(MODIFIER||969||473|LOC_Os03g17570|protein_coding|CODING|LOC_Os03g17570.6|1|1),UTR_5_PRIME(MODIFIER||969||767|LOC_Os03g17570|protein_coding|CODING|LOC_Os03g17570.2|1|1) FN870-S.SNP.3:9769174 chr03:009769174 0 W/9769174-9769174 FN870-S Single Base Substitution G-A INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN465-S.SNP.3:9770728 chr03:009770728 0 W/9770728-9770728 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1666-S.SNP.3:9770980 chr03:009770980 0 W/9770980-9770980 FN1666-S SNP C -> A AC=1;AN=188;BQB=0.39786;DP=3332;DP4=1821,1479,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.51963e-12;MQSB=0.999705;RPB=0.809076;SGB=60.7873;VDB=0.59346;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.3:9773679 chr03:009773679 0 W/9773679-9773679 FN4024-S SNP T -> A AC=1;AN=168;BQB=0.688949;DP=2604;DP4=1268,1180,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.89894e-09;MQSB=0.394184;RPB=0.971964;SGB=1.32907;VDB=0.570811;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.3:9773680 chr03:009773680 0 W/9773680-9773680 FN4024-S SNP T -> A AC=1;AN=168;BQB=0.895898;DP=2600;DP4=1291,1177,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08379e-09;MQSB=0.536913;RPB=0.993216;SGB=2.75988;VDB=0.400989;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.3:9782554 chr03:009782554 0 W/9782554-9782554 FN952-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN585-S.SNP.3:9783854 chr03:009783854 0 W/9783854-9783854 FN585-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN445-S.SNP.3:9787118 chr03:009787118 0 W/9787118-9787118 FN445-S Single Base Substitution C-T INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN445-S.SNP.3:9787119 chr03:009787119 0 W/9787119-9787119 FN445-S Single Base Substitution A-T INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN910-S.SNP.3:9791623 chr03:009791623 0 W/9791623-9791623 FN910-S Single Base Substitution C-T INTRON HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3309-S.SNP.3:9793682 chr03:009793682 0 W/9793682-9793682 FN3309-S SNP C -> G AC=2;AN=184;BQB=0.693325;DP=2888;DP4=1263,1493,9,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.78148e-14;MQSB=1;RPB=0.99933;SGB=23.542;VDB=0.147475;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.3:9793812 chr03:009793812 0 W/9793812-9793812 FN425-S Single Base Substitution G-A INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN425-S.SNP.3:9793813 chr03:009793813 0 W/9793813-9793813 FN425-S Single Base Substitution G-T INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN4208-S.SNP.3:9803569 chr03:009803569 0 W/9803569-9803569 FN4208-S SNP A -> T AC=1;AN=170;BQB=0.8736;DP=2503;DP4=1236,1150,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31282e-09;MQSB=0.999972;RPB=0.74016;SGB=38.3207;VDB=0.0931947;EFF=INTRON(MODIFIER||||819|LOC_Os03g17634|protein_coding|CODING|LOC_Os03g17634.1|8|1) FN4208-S.SNP.3:9803570 chr03:009803570 0 W/9803570-9803570 FN4208-S SNP G -> T AC=1;AN=170;BQB=0.999018;DP=2503;DP4=1274,1159,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.1167e-10;MQSB=0.999989;RPB=0.999456;SGB=22.3266;VDB=0.209061;EFF=INTRON(MODIFIER||||819|LOC_Os03g17634|protein_coding|CODING|LOC_Os03g17634.1|8|1) FN3914-S.SNP.3:9804901 chr03:009804901 0 W/9804901-9804901 FN3914-S SNP C -> G AC=1;AN=158;BQB=0.800197;DP=2603;DP4=1215,1274,11,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.8968e-12;MQSB=0.999982;RPB=0.965845;SGB=77.6532;VDB=0.915291;EFF=INTRON(MODIFIER||||819|LOC_Os03g17634|protein_coding|CODING|LOC_Os03g17634.1|8|1) FN3912-S.SNP.3:9807823 chr03:009807823 0 W/9807823-9807823 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.894938;DP=2538;DP4=1244,1225,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.61321e-07;MQSB=0.160098;RPB=0.0676358;SGB=42.6978;VDB=0.32056;EFF=INTRON(MODIFIER||||819|LOC_Os03g17634|protein_coding|CODING|LOC_Os03g17634.1|8|1) FN-306.SNP.3:9807902 chr03:009807902 0 W/9807902-9807902 FN-306 Single Base Substitution G-T INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN881-S.SNP.3:9809907 chr03:009809907 0 W/9809907-9809907 FN881-S Single Base Substitution G-A INTRON HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN917-S.SNP.3:9811880 chr03:009811880 0 W/9811880-9811880 FN917-S Single Base Substitution C-A INTRON HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1537-S.SNP.3:9813894 chr03:009813894 0 W/9813894-9813894 FN1537-S Single Base Substitution C-T INTRON HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3465-S.SNP.3:9815917 chr03:009815917 0 W/9815917-9815917 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.30408;DP=2736;DP4=1297,1361,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.68806e-10;MQSB=0.996641;RPB=0.928246;SGB=12.8895;VDB=0.874372;EFF=INTRON(MODIFIER||||819|LOC_Os03g17634|protein_coding|CODING|LOC_Os03g17634.1|8|1) FN1496-S.SNP.3:9827961 chr03:009827961 0 W/9827961-9827961 FN1496-S Single Base Substitution C-T INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1193-S.SNP.3:9834174 chr03:009834174 0 W/9834174-9834174 FN1193-S Single Base Substitution G-A INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN-255.SNP.3:9836826 chr03:009836826 0 W/9836826-9836826 FN-255 Single Base Substitution G-A INTERGENIC HOMO SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1047-S.SNP.3:9838659 chr03:009838659 0 W/9838659-9838659 FN1047-S Single Base Substitution T-G INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN758-S.SNP.3:9839166 chr03:009839166 0 W/9839166-9839166 FN758-S Single Base Substitution C-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN1031-S.SNP.3:9839413 chr03:009839413 0 W/9839413-9839413 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3580-S.SNP.3:9842653 chr03:009842653 0 W/9842653-9842653 FN3580-S SNP G -> T AC=1;AN=188;BQB=0.595365;DP=2873;DP4=1410,1325,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82678e-08;MQSB=0.99879;RPB=0.825671;SGB=35.9843;VDB=0.936089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.3:9843312 chr03:009843312 0 W/9843312-9843312 FN3560-S SNP G -> T AC=1;AN=188;BQB=0.430665;DP=3561;DP4=1971,1514,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67114e-08;MQSB=0.978267;RPB=0.567559;SGB=-12.8266;VDB=0.217422;EFF=INTERGENIC(MODIFIER||||||||||1) FN-300.SNP.3:9847972 chr03:009847972 0 W/9847972-9847972 FN-300 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g17700 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN3957-S.SNP.3:9847972 chr03:009847972 0 W/9847972-9847972 FN3957-S SNP T -> C AC=2;AN=168;BQB=0.327628;DP=2450;DP4=1132,1195,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000408163;MQB=1.23863e-09;MQSB=0.888873;RPB=0.85144;SGB=41.6313;VDB=0.882166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q351R|369|LOC_Os03g17700|protein_coding|CODING|LOC_Os03g17700.1|6|1) FN4148-S.SNP.3:9847972 chr03:009847972 0 W/9847972-9847972 FN4148-S SNP T -> C AC=1;AN=170;BQB=0.666741;DP=2467;DP4=1198,1195,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.57765e-07;MQSB=0.990359;RPB=0.672438;SGB=22.3266;VDB=0.239048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q351R|369|LOC_Os03g17700|protein_coding|CODING|LOC_Os03g17700.1|6|1) FN896-S.SNP.3:9847972 chr03:009847972 0 W/9847972-9847972 FN896-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g17700 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN1216-S.SNP.3:9856987 chr03:009856987 0 W/9856987-9856987 FN1216-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN672-S.SNP.3:9858485 chr03:009858485 0 W/9858485-9858485 FN672-S Single Base Substitution C-T INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN465-S.SNP.3:9862843 chr03:009862843 0 W/9862843-9862843 FN465-S Single Base Substitution G-C INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN-332.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN-332 Single Base Substitution T-C INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1297-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN1297-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1484-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN1484-S Single Base Substitution T-C INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2449.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN2449 SNP T -> C AC=2;AN=200;BQB=0.306883;DP=4469;DP4=2151,2005,21,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.51859e-14;MQSB=0.953817;RPB=0.984666;SGB=97.9523;VDB=0.654357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN3358-S SNP T -> C AC=2;AN=184;BQB=0.822828;DP=2616;DP4=1353,1143,12,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.52605e-09;MQSB=0.838654;RPB=0.488091;SGB=28.3187;VDB=0.750203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN3613-S SNP T -> C AC=2;AN=190;BQB=0.872989;DP=2662;DP4=1331,1203,20,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.10324e-17;MQSB=0.817194;RPB=0.398249;SGB=121.394;VDB=0.338219;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN369-S Single Base Substitution T-C INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3806-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN3806-S SNP T -> C AC=1;AN=190;BQB=0.28108;DP=2424;DP4=1300,1046,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77997e-06;MQSB=0.543883;RPB=0.999666;SGB=23.6597;VDB=0.930356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN3955-S SNP T -> C AC=1;AN=168;BQB=0.995837;DP=2235;DP4=1176,945,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.91813e-08;MQSB=0.377803;RPB=0.99539;SGB=56.6036;VDB=0.868407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN4166-S SNP T -> C AC=2;AN=170;BQB=0.915058;DP=2181;DP4=1195,911,6,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.38372e-06;MQSB=0.768727;RPB=0.434596;SGB=27.9928;VDB=0.0339896;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN469-S Single Base Substitution T-C INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN477-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN477-S Single Base Substitution T-C INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN780-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN780-S Single Base Substitution T-C INTERGENIC HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN853-S Single Base Substitution T-C INTERGENIC HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 FN908-S Single Base Substitution T-C INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. W385-6-8-4.SNP.3:9863238 chr03:009863238 0 W/9863238-9863238 W385-6-8-4 Single Base Substitution T-C INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN549-S.SNP.3:9878831 chr03:009878831 0 W/9878831-9878831 FN549-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN420-S.SNP.3:9882698 chr03:009882698 0 W/9882698-9882698 FN420-S Single Base Substitution G-C INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2271-S.SNP.3:9890001 chr03:009890001 0 W/9890001-9890001 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.720247;DP=4864;DP4=2252,2038,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.49312e-06;MQSB=0.4108;RPB=0.280727;SGB=8.77275;VDB=0.234292;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.3:9890171 chr03:009890171 0 W/9890171-9890171 FN2386 SNP C -> T AC=1;AN=192;BQB=0.998423;DP=4704;DP4=2019,2345,12,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2799e-18;MQSB=0.950008;RPB=0.881245;SGB=35.5131;VDB=0.912176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.3:9892289 chr03:009892289 0 W/9892289-9892289 FN2180-S SNP G -> A AC=2;AN=190;BQB=0.558148;DP=4498;DP4=2041,1995,25,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000222321;MQB=8.00707e-24;MQSB=0.135891;RPB=0.939399;SGB=2.84045;VDB=0.0932064;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.3:9892311 chr03:009892311 0 W/9892311-9892311 FN1543-S Single Base Substitution T-C INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN3815-S.SNP.3:9897008 chr03:009897008 0 W/9897008-9897008 FN3815-S SNP A -> G AC=1;AN=190;BQB=0.995629;DP=3174;DP4=1603,1439,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.98203e-06;MQSB=0.771753;RPB=0.288875;SGB=21.8853;VDB=0.115419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.3:9901310 chr03:009901310 0 W/9901310-9901310 FN3627-S SNP A -> G AC=1;AN=190;BQB=0.783198;DP=3005;DP4=1338,1596,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000332779;MQB=4.84802e-06;MQSB=0.969532;RPB=0.870075;SGB=53.6492;VDB=0.689768;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.3:9905618 chr03:009905618 0 W/9905618-9905618 FN4165-S SNP A -> T AC=1;AN=170;BQB=0.98614;DP=2798;DP4=1473,1266,3,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000252759;MQSB=0.912324;RPB=0.654823;SGB=21.2191;VDB=0.530999;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcA|S34|195|LOC_Os03g17800|protein_coding|CODING|LOC_Os03g17800.1|5|1) FN2530-S.SNP.3:9909611 chr03:009909611 0 W/9909611-9909611 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.739772;DP=4043;DP4=2109,1717,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.31677e-10;MQSB=0.9928;RPB=0.475591;SGB=50.9344;VDB=0.590847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.3:9913981 chr03:009913981 0 W/9913981-9913981 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.79954;DP=4948;DP4=2514,2093,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97159e-07;MQSB=0.889991;RPB=0.571729;SGB=-0.141083;VDB=0.204983;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.3:9917789 chr03:009917789 0 W/9917789-9917789 FN-176 Single Base Substitution G-A INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2291.SNP.3:9919971 chr03:009919971 0 W/9919971-9919971 FN2291 SNP G -> A AC=1;AN=192;BQB=0.451835;DP=4188;DP4=1949,1973,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18376e-16;MQSB=0.848184;RPB=0.762323;SGB=122.24;VDB=0.875678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.3:9919972 chr03:009919972 0 W/9919972-9919972 FN2291 SNP C -> T AC=1;AN=192;BQB=0.424148;DP=4186;DP4=1963,1951,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.89937e-17;MQSB=0.756557;RPB=0.357879;SGB=126.804;VDB=0.78843;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.3:9926537 chr03:009926537 0 W/9926537-9926537 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1669-S.SNP.3:9926848 chr03:009926848 0 W/9926848-9926848 FN1669-S SNP G -> A AC=2;AN=188;BQB=0.0121282;DP=2349;DP4=1166,1118,21,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.18408e-14;MQSB=0.669801;RPB=0.97524;SGB=41.7199;VDB=0.828411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.3:9927551 chr03:009927551 0 W/9927551-9927551 FN3492-S SNP C -> G AC=1;AN=184;BQB=0.973672;DP=2913;DP4=1204,1605,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0315826;MQB=0.976774;MQSB=0.260073;RPB=0.874692;SGB=39.699;VDB=0.518983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.3:9929280 chr03:009929280 0 W/9929280-9929280 FN3433-S SNP T -> G AC=1;AN=184;BQB=0.903468;DP=2645;DP4=1272,1236,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000378072;MQB=9.43576e-05;MQSB=1.146e-07;RPB=0.838883;SGB=32.2261;VDB=0.145396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.3:9934563 chr03:009934563 0 W/9934563-9934563 FN1124-S Single Base Substitution C-T INTRON HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN560-S.SNP.3:9935720 chr03:009935720 0 W/9935720-9935720 FN560-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g17840 expressed protein SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1677-S.SNP.3:9943044 chr03:009943044 0 W/9943044-9943044 FN1677-S SNP C -> T AC=2;AN=188;BQB=0.616519;DP=2689;DP4=799,1850,4,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.05241e-13;MQSB=0.992053;RPB=0.0221007;SGB=56.5957;VDB=0.196725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.3:9957297 chr03:009957297 0 W/9957297-9957297 FN1204-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN486-S.SNP.3:9959620 chr03:009959620 0 W/9959620-9959620 FN486-S Single Base Substitution C-A INTERGENIC HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1460-S.SNP.3:9964410 chr03:009964410 0 W/9964410-9964410 FN1460-S Single Base Substitution T-C INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN885-S.SNP.3:9969810 chr03:009969810 0 W/9969810-9969810 FN885-S Single Base Substitution T-A INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN2575-S.SNP.3:9974186 chr03:009974186 0 W/9974186-9974186 FN2575-S SNP C -> G AC=2;AN=198;BQB=0.900396;DP=4375;DP4=2184,1905,40,40;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.54792e-44;MQSB=0.96899;RPB=0.18666;SGB=267.26;VDB=0.717523;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L216|536|LOC_Os03g17900|protein_coding|CODING|LOC_Os03g17900.1|3|1) FN3766-S.SNP.3:9977079 chr03:009977079 0 W/9977079-9977079 FN3766-S SNP G -> A AC=1;AN=190;BQB=0.896112;DP=2661;DP4=1405,1165,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.21243e-10;MQSB=0.991939;RPB=0.579566;SGB=62.7569;VDB=0.25488;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V462|536|LOC_Os03g17900|protein_coding|CODING|LOC_Os03g17900.1|6|1) FN2534-S.SNP.3:9988390 chr03:009988390 0 W/9988390-9988390 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.971065;DP=3989;DP4=1917,1834,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.21973e-09;MQSB=0.727251;RPB=0.205806;SGB=29.3443;VDB=0.633854;EFF=INTRON(MODIFIER||||436|LOC_Os03g17930|protein_coding|CODING|LOC_Os03g17930.1|3|1),INTRON(MODIFIER||||430|LOC_Os03g17930|protein_coding|CODING|LOC_Os03g17930.2|3|1),INTRON(MODIFIER||||425|LOC_Os03g17930|protein_coding|CODING|LOC_Os03g17930.3|3|1) W23-2-1.SNP.3:9993914 chr03:009993914 0 W/9993914-9993914 W23-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN724-S.SNP.3:9994050 chr03:009994050 0 W/9994050-9994050 FN724-S Single Base Substitution C-T INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1571-S.SNP.3:9997044 chr03:009997044 0 W/9997044-9997044 FN1571-S Single Base Substitution A-G INTRON HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN3916-S.SNP.3:10001685 chr03:010001685 0 W/10001685-10001685 FN3916-S SNP C -> G AC=2;AN=158;BQB=0.986193;DP=2249;DP4=1072,1088,9,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.44592e-15;MQSB=0.841993;RPB=0.979555;SGB=74.5068;VDB=0.160624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L479V|555|LOC_Os03g17960|protein_coding|CODING|LOC_Os03g17960.1|4|1) FN1571-S.SNP.3:10005734 chr03:010005734 0 W/10005734-10005734 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2589-S.SNP.3:10010302 chr03:010010302 0 W/10010302-10010302 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.991594;DP=4149;DP4=2025,1909,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.74783e-08;MQSB=0.938217;RPB=0.860325;SGB=32.9588;VDB=0.366082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V343I|548|LOC_Os03g17980|protein_coding|CODING|LOC_Os03g17980.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V300I|508|LOC_Os03g17980|protein_coding|CODING|LOC_Os03g17980.2|7|1) FN4147-S.SNP.3:10015394 chr03:010015394 0 W/10015394-10015394 FN4147-S SNP C -> T AC=2;AN=170;BQB=0.948022;DP=2202;DP4=900,1233,6,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.84726e-11;MQSB=0.999983;RPB=0.163434;SGB=48.6486;VDB=0.10769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.3:10016861 chr03:010016861 0 W/10016861-10016861 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.936748;DP=2507;DP4=1258,1073,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.60193e-05;MQSB=0.316635;RPB=0.490753;SGB=49.0954;VDB=0.153225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G76S|256|LOC_Os03g17990|protein_coding|CODING|LOC_Os03g17990.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G76S|197|LOC_Os03g17990|protein_coding|CODING|LOC_Os03g17990.2|1|1) FN3626-S.SNP.3:10020039 chr03:010020039 0 W/10020039-10020039 FN3626-S SNP A -> G AC=1;AN=190;BQB=0.946814;DP=2916;DP4=1341,1483,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.60619e-06;MQSB=0.977272;RPB=0.749972;SGB=35.4339;VDB=0.408947;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.3:10020688 chr03:010020688 0 W/10020688-10020688 FN-146 Single Base Substitution C-A INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-198.SNP.3:10020697 chr03:010020697 0 W/10020697-10020697 FN-198 Single Base Substitution A-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN971-S.SNP.3:10023127 chr03:010023127 0 W/10023127-10023127 FN971-S Single Base Substitution T-G INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1065-S.SNP.3:10023228 chr03:010023228 0 W/10023228-10023228 FN1065-S Single Base Substitution T-G INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3678-S.SNP.3:10023533 chr03:010023533 0 W/10023533-10023533 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.755484;DP=2988;DP4=1317,1555,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07499e-06;MQSB=0.9947;RPB=0.0886874;SGB=36.1006;VDB=0.196599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.3:10030782 chr03:010030782 0 W/10030782-10030782 FN3796-S SNP G -> A AC=2;AN=190;BQB=0.998715;DP=2543;DP4=1234,1143,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.00721e-10;MQSB=0.261149;RPB=0.501594;SGB=41.5369;VDB=0.30504;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.3:10036043 chr03:010036043 0 W/10036043-10036043 FN_830-6-1 Single Base Substitution G-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN4119-S.SNP.3:10039658 chr03:010039658 0 W/10039658-10039658 FN4119-S SNP G -> A AC=1;AN=182;BQB=0.925608;DP=2325;DP4=1159,1063,2,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.10155e-05;MQSB=0.995268;RPB=0.995187;SGB=26.0691;VDB=0.0943152;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P327L|387|LOC_Os03g18030|protein_coding|CODING|LOC_Os03g18030.1|2|1),UTR_3_PRIME(MODIFIER||168||285|LOC_Os03g18030|protein_coding|CODING|LOC_Os03g18030.2|2|1) FN-338.SNP.3:10041477 chr03:010041477 0 W/10041477-10041477 FN-338 Single Base Substitution G-A INTRON HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN3499-S.SNP.3:10041905 chr03:010041905 0 W/10041905-10041905 FN3499-S SNP G -> T AC=1;AN=188;BQB=0.966038;DP=2792;DP4=1318,1407,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16947e-08;MQSB=0.99504;RPB=0.896828;SGB=53.5223;VDB=0.867611;EFF=INTRON(MODIFIER||||387|LOC_Os03g18030|protein_coding|CODING|LOC_Os03g18030.1|1|1),INTRON(MODIFIER||||285|LOC_Os03g18030|protein_coding|CODING|LOC_Os03g18030.2|1|1) FN2175-S.SNP.3:10045023 chr03:010045023 0 W/10045023-10045023 FN2175-S SNP G -> A AC=1;AN=168;BQB=0.0629279;DP=3155;DP4=1430,1692,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.84214e-06;MQSB=0.908533;RPB=0.311855;SGB=-13.2184;VDB=0.659399;EFF=INTRON(MODIFIER||||81|LOC_Os03g18040|protein_coding|CODING|LOC_Os03g18040.1|1|1) FN3454-S.SNP.3:10059490 chr03:010059490 0 W/10059490-10059490 FN3454-S SNP G -> A AC=2;AN=184;BQB=0.976594;DP=2653;DP4=1098,1423,12,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.01553e-10;MQSB=0.745823;RPB=0.0476435;SGB=-12.6269;VDB=0.349245;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.3:10061057 chr03:010061057 0 W/10061057-10061057 FN543-S Single Base Substitution C-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3287-S.SNP.3:10068151 chr03:010068151 0 W/10068151-10068151 FN3287-S SNP T -> A AC=1;AN=184;BQB=0.756821;DP=3159;DP4=1444,1562,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0718582;MQB=0.512633;MQSB=6.67382e-06;RPB=0.686368;SGB=42.7914;VDB=0.145554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S782C|1688|LOC_Os03g18060|protein_coding|CODING|LOC_Os03g18060.1|4|1) FN3511-S.SNP.3:10071811 chr03:010071811 0 W/10071811-10071811 FN3511-S SNP G -> C AC=1;AN=188;BQB=0.972863;DP=2835;DP4=1784,984,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0158255;MQSB=0.130899;RPB=0.221989;SGB=44.4357;VDB=0.771728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.3:10075635 chr03:010075635 0 W/10075635-10075635 FN2421 SNP C -> T AC=1;AN=200;BQB=0.884742;DP=5010;DP4=2667,2008,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.10632e-08;MQSB=0.993091;RPB=0.916353;SGB=3.06925;VDB=0.867348;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.3:10075822 chr03:010075822 0 W/10075822-10075822 FN4020-S SNP T -> C AC=2;AN=168;BQB=0.99985;DP=1823;DP4=817,748,13,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=8.76636e-09;MQSB=2.0524e-06;RPB=0.870805;SGB=46.4929;VDB=0.780573;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.3:10078598 chr03:010078598 0 W/10078598-10078598 FN1614-S Single Base Substitution T-C INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1200-S.SNP.3:10090292 chr03:010090292 0 W/10090292-10090292 FN1200-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1009-S.SNP.3:10093020 chr03:010093020 0 W/10093020-10093020 FN1009-S Single Base Substitution C-A INTRON HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3468-S.SNP.3:10097707 chr03:010097707 0 W/10097707-10097707 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.947774;DP=2966;DP4=1272,1564,25,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12078e-25;MQSB=0.293058;RPB=0.953704;SGB=210.549;VDB=0.54804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A13V|600|LOC_Os03g18080|protein_coding|CODING|LOC_Os03g18080.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A13V|599|LOC_Os03g18080|protein_coding|CODING|LOC_Os03g18080.2|1|1) FN3468-S.SNP.3:10097974 chr03:010097974 0 W/10097974-10097974 FN3468-S SNP C -> A AC=2;AN=184;BQB=0.78224;DP=3343;DP4=1276,1918,14,23;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.97335e-21;MQSB=5.64622e-05;RPB=0.833985;SGB=161.787;VDB=0.650061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.3:10097975 chr03:010097975 0 W/10097975-10097975 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.994359;DP=3341;DP4=1266,1892,13,28;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.49405e-23;MQSB=3.15041e-05;RPB=0.895948;SGB=88.8416;VDB=0.616685;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.3:10105442 chr03:010105442 0 W/10105442-10105442 FN869-S Single Base Substitution G-A INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN892-S.SNP.3:10110706 chr03:010110706 0 W/10110706-10110706 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-371.SNP.3:10113212 chr03:010113212 0 W/10113212-10113212 FN-371 Single Base Substitution C-T INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN282-S.SNP.3:10113212 chr03:010113212 0 W/10113212-10113212 FN282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN-286.SNP.3:10116466 chr03:010116466 0 W/10116466-10116466 FN-286 Single Base Substitution T-C INTRON HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN534-S.SNP.3:10120998 chr03:010120998 0 W/10120998-10120998 FN534-S Single Base Substitution G-C INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3789-S.SNP.3:10125798 chr03:010125798 0 W/10125798-10125798 FN3789-S SNP G -> T AC=1;AN=190;BQB=0.863936;DP=2498;DP4=1127,1210,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.945e-07;MQSB=0.998594;RPB=0.414136;SGB=18.552;VDB=0.385426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.3:10129673 chr03:010129673 0 W/10129673-10129673 FN2083-S SNP C -> A AC=2;AN=168;BQB=0.378497;DP=3503;DP4=1539,1814,36,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.34649e-14;MQSB=0.0162042;RPB=0.0177219;SGB=-372.826;VDB=0.015787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.3:10131412 chr03:010131412 0 W/10131412-10131412 FN3838-S SNP C -> G AC=1;AN=190;BQB=0.817887;DP=2644;DP4=1121,1415,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57089e-07;MQSB=0.951832;RPB=0.698184;SGB=62.7569;VDB=0.917384;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.3:10131560 chr03:010131560 0 W/10131560-10131560 FN1476-S Single Base Substitution T-G INTERGENIC Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2617-S.SNP.3:10133556 chr03:010133556 0 W/10133556-10133556 FN2617-S SNP T -> A AC=1;AN=198;BQB=0.964233;DP=4345;DP4=2039,2088,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=7.20584e-12;MQSB=0.918741;RPB=0.69913;SGB=47.5102;VDB=0.684934;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.3:10142325 chr03:010142325 0 W/10142325-10142325 FN_552-1-1 Single Base Substitution G-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3387-S.SNP.3:10142804 chr03:010142804 0 W/10142804-10142804 FN3387-S SNP A -> T AC=1;AN=184;BQB=0.912451;DP=3208;DP4=1526,1565,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62516e-10;MQSB=0.881007;RPB=0.999747;SGB=75.8731;VDB=0.0409749;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.3:10142874 chr03:010142874 0 W/10142874-10142874 FN3979-S SNP A -> G AC=1;AN=168;BQB=0.903804;DP=2720;DP4=1563,989,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.4164e-14;MQSB=0.90655;RPB=0.950592;SGB=14.2064;VDB=0.668293;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.3:10144108 chr03:010144108 0 W/10144108-10144108 FN1040-S Single Base Substitution C-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2572-S.SNP.3:10144767 chr03:010144767 0 W/10144767-10144767 FN2572-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1426-S.SNP.3:10149331 chr03:010149331 0 W/10149331-10149331 FN1426-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN-35.SNP.3:10152029 chr03:010152029 0 W/10152029-10152029 FN-35 Single Base Substitution G-A INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN3923-S.SNP.3:10157900 chr03:010157900 0 W/10157900-10157900 FN3923-S SNP A -> G AC=2;AN=158;BQB=0.943532;DP=2534;DP4=1010,1432,7,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.92878e-14;MQSB=0.991483;RPB=0.984876;SGB=71.1374;VDB=0.887511;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.3:10160556 chr03:010160556 0 W/10160556-10160556 FN1368-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3424-S.SNP.3:10161451 chr03:010161451 0 W/10161451-10161451 FN3424-S SNP G -> T AC=2;AN=184;BQB=0.562221;DP=3223;DP4=1480,1579,15,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18224e-11;MQSB=0.824807;RPB=0.510538;SGB=107.526;VDB=0.608573;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.3:10161661 chr03:010161661 0 W/10161661-10161661 FN4231-S SNP G -> A AC=2;AN=170;BQB=0.990567;DP=2891;DP4=1402,1328,18,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.6457e-15;MQSB=0.672122;RPB=0.899923;SGB=79.6325;VDB=0.245644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.3:10167113 chr03:010167113 0 W/10167113-10167113 FN3615-S SNP G -> A AC=1;AN=190;BQB=0.965444;DP=3211;DP4=1488,1605,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.43229e-08;MQSB=0.801369;RPB=0.874746;SGB=49.0954;VDB=0.83351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.3:10168785 chr03:010168785 0 W/10168785-10168785 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.950485;DP=4343;DP4=2190,2109,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.655e-12;MQSB=0.997923;RPB=0.986128;SGB=79.3486;VDB=0.33426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.3:10172788 chr03:010172788 0 W/10172788-10172788 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.988175;DP=2839;DP4=1280,1470,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.3699e-07;MQSB=0.999601;RPB=0.871747;SGB=44.2207;VDB=0.872319;EFF=INTRON(MODIFIER||||333|LOC_Os03g18160|protein_coding|CODING|LOC_Os03g18160.1|1|1) FN3887-S.SNP.3:10177647 chr03:010177647 0 W/10177647-10177647 FN3887-S SNP T -> C AC=1;AN=158;BQB=0.918192;DP=2512;DP4=1053,1355,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.59917e-08;MQSB=0.707828;RPB=0.363561;SGB=21.4493;VDB=0.0732263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.3:10183167 chr03:010183167 0 W/10183167-10183167 FN1553-S Single Base Substitution C-T INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2554-S.SNP.3:10187657 chr03:010187657 0 W/10187657-10187657 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.783706;DP=4378;DP4=2021,2147,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.50042e-10;MQSB=0.990781;RPB=0.777325;SGB=67.9293;VDB=0.742167;EFF=UTR_3_PRIME(MODIFIER||168||209|LOC_Os03g18180|protein_coding|CODING|LOC_Os03g18180.1|4|1) FN1371-S.SNP.3:10188230 chr03:010188230 0 W/10188230-10188230 FN1371-S Single Base Substitution A-G INTRON HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN4001-S.SNP.3:10198444 chr03:010198444 0 W/10198444-10198444 FN4001-S SNP A -> T AC=2;AN=168;BQB=0.466015;DP=2586;DP4=1306,1196,11,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.17871e-07;MQSB=0.994776;RPB=0.446847;SGB=78.7577;VDB=0.302793;EFF=INTRON(MODIFIER||||1032|LOC_Os03g18190|protein_coding|CODING|LOC_Os03g18190.1|8|1) FN860-S.SNP.3:10201003 chr03:010201003 0 W/10201003-10201003 FN860-S Single Base Substitution A-G INTRON HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN3763-S.SNP.3:10202557 chr03:010202557 0 W/10202557-10202557 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.918656;DP=2440;DP4=906,1410,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.42511e-06;MQSB=0.8885;RPB=0.876627;SGB=21.8853;VDB=0.942779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.3:10202659 chr03:010202659 0 W/10202659-10202659 FN1463-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2577-S.SNP.3:10202659 chr03:010202659 0 W/10202659-10202659 FN2577-S SNP T -> A AC=1;AN=198;BQB=0.969384;DP=4044;DP4=1981,1826,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.49656e-05;MQSB=0.742251;RPB=0.766366;SGB=-0.221308;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.3:10205474 chr03:010205474 0 W/10205474-10205474 FN714-S Single Base Substitution T-A INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3599-S.SNP.3:10212104 chr03:010212104 0 W/10212104-10212104 FN3599-S SNP T -> A AC=1;AN=188;BQB=0.801988;DP=3682;DP4=1648,1396,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=1.82698e-10;MQSB=1.45597e-10;RPB=0.998627;SGB=71.6954;VDB=0.0845138;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.3:10219139 chr03:010219139 0 W/10219139-10219139 FN654-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g18220 pyruvate decarboxylase isozyme 2, putative, expressed SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN962-S.SNP.3:10223426 chr03:010223426 0 W/10223426-10223426 FN962-S Single Base Substitution G-A INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN-372.SNP.3:10226047 chr03:010226047 0 W/10226047-10226047 FN-372 Single Base Substitution G-C INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-142.SNP.3:10228821 chr03:010228821 0 W/10228821-10228821 FN-142 Single Base Substitution C-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN-65.SNP.3:10229030 chr03:010229030 0 W/10229030-10229030 FN-65 Single Base Substitution G-A INTERGENIC HOMO SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3715-S.SNP.3:10239492 chr03:010239492 0 W/10239492-10239492 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.70324;DP=2777;DP4=1381,1289,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37494e-13;MQSB=0.981673;RPB=0.538682;SGB=19.6499;VDB=0.105578;EFF=UTR_5_PRIME(MODIFIER||1422||74|LOC_Os03g18264|protein_coding|CODING|LOC_Os03g18264.1|4|1) FN1329-S.SNP.3:10246908 chr03:010246908 0 W/10246908-10246908 FN1329-S Single Base Substitution T-G INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN4142-S.SNP.3:10248367 chr03:010248367 0 W/10248367-10248367 FN4142-S SNP C -> G AC=1;AN=170;BQB=0.929528;DP=2285;DP4=1092,1130,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000181587;MQSB=0.983822;RPB=0.992737;SGB=30.1021;VDB=0.978746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.3:10251828 chr03:010251828 0 W/10251828-10251828 FN3504-S SNP C -> T AC=1;AN=188;BQB=0.946552;DP=2817;DP4=1581,1188,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.44552e-09;MQSB=0.871493;RPB=0.999731;SGB=58.0655;VDB=0.506022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.3:10253145 chr03:010253145 0 W/10253145-10253145 FN1179-S Single Base Substitution A-G INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2546-S.SNP.3:10258547 chr03:010258547 0 W/10258547-10258547 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.383292;DP=3760;DP4=1770,1777,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70744e-07;MQSB=0.996718;RPB=0.984873;SGB=50.9344;VDB=0.982728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.3:10261920 chr03:010261920 0 W/10261920-10261920 FN1080-S Single Base Substitution T-A INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-400.SNP.3:10262719 chr03:010262719 0 W/10262719-10262719 FN-400 Single Base Substitution A-C INTRON HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.3:10262719 chr03:010262719 0 W/10262719-10262719 FN400-S Single Base Substitution A-C INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1568-S.SNP.3:10265833 chr03:010265833 0 W/10265833-10265833 FN1568-S Single Base Substitution T-A INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN239-S.SNP.3:10272016 chr03:010272016 0 W/10272016-10272016 FN239-S Single Base Substitution A-C INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3637-S.SNP.3:10273272 chr03:010273272 0 W/10273272-10273272 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.0432045;DP=3480;DP4=1698,1581,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000287356;MQB=6.80743e-05;MQSB=0.0173393;RPB=0.673203;SGB=7.21887;VDB=0.94761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.3:10276577 chr03:010276577 0 W/10276577-10276577 FN1553-S Single Base Substitution A-G INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN1690-S.SNP.3:10280830 chr03:010280830 0 W/10280830-10280830 FN1690-S SNP G -> T AC=1;AN=188;BQB=0.0190867;DP=3772;DP4=1785,1954,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00438201;MQSB=0.930606;RPB=0.925775;SGB=-56.0757;VDB=0.394633;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V730|870|LOC_Os03g18350|protein_coding|CODING|LOC_Os03g18350.1|1|1) FN825-S.SNP.3:10281609 chr03:010281609 0 W/10281609-10281609 FN825-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g18350 importin subunit beta, putative, expressed SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1288-S.SNP.3:10284711 chr03:010284711 0 W/10284711-10284711 FN1288-S Single Base Substitution A-G INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3464-S.SNP.3:10295894 chr03:010295894 0 W/10295894-10295894 FN3464-S SNP T -> A AC=1;AN=184;BQB=0.678276;DP=3161;DP4=1354,1572,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.09992e-06;MQSB=0.9976;RPB=0.65958;SGB=13.188;VDB=0.791805;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.3:10303803 chr03:010303803 0 W/10303803-10303803 FN541-S Single Base Substitution A-C INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN-174.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN-174 Single Base Substitution T-A INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-399.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN-399 Single Base Substitution T-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2460.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN2460 SNP T -> A AC=2;AN=200;BQB=0.999635;DP=5151;DP4=2533,2280,15,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14137e-19;MQSB=0.94839;RPB=0.990901;SGB=78.9831;VDB=0.102843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN2782-S SNP T -> A AC=1;AN=198;BQB=0.979577;DP=4016;DP4=1946,1855,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23614e-14;MQSB=0.84301;RPB=0.945793;SGB=118.476;VDB=0.143411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN3565-S SNP T -> A AC=1;AN=188;BQB=0.690822;DP=2867;DP4=1398,1376,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06243e-05;MQSB=0.976284;RPB=0.871914;SGB=20.9896;VDB=0.563024;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN3987-S SNP T -> A AC=2;AN=168;BQB=0.961249;DP=2752;DP4=1341,1289,16,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.04452e-15;MQSB=0.756726;RPB=0.767872;SGB=89.641;VDB=0.314475;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.3:10308797 chr03:010308797 0 W/10308797-10308797 FN491-S Single Base Substitution T-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2453.SNP.3:10311538 chr03:010311538 0 W/10311538-10311538 FN2453 SNP C -> T AC=1;AN=200;BQB=0.984198;DP=5025;DP4=2128,2568,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.71052e-06;MQSB=0.968289;RPB=0.987045;SGB=29.4541;VDB=0.0205944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.3:10311574 chr03:010311574 0 W/10311574-10311574 FN2164-S SNP T -> G AC=1;AN=168;BQB=0.0125513;DP=3779;DP4=1570,2173,5,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.29532e-08;MQSB=0.962746;RPB=0.560067;SGB=-168.619;VDB=0.49337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.3:10312273 chr03:010312273 0 W/10312273-10312273 FN-184 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g18390 hypothetical protein SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-184.SNP.3:10312274 chr03:010312274 0 W/10312274-10312274 FN-184 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-122.SNP.3:10321003 chr03:010321003 0 W/10321003-10321003 FN-122 Single Base Substitution T-A INTRON HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN992-S.SNP.3:10324145 chr03:010324145 0 W/10324145-10324145 FN992-S Single Base Substitution T-C INTRON HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN3306-S.SNP.3:10326369 chr03:010326369 0 W/10326369-10326369 FN3306-S SNP A -> T AC=1;AN=184;BQB=0.974913;DP=2717;DP4=1405,1238,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07398e-06;MQSB=0.964379;RPB=0.731349;SGB=39.699;VDB=0.881279;EFF=INTRON(MODIFIER||||110|LOC_Os03g18420|protein_coding|CODING|LOC_Os03g18420.1|1|1) FN2097-S.SNP.3:10330973 chr03:010330973 0 W/10330973-10330973 FN2097-S SNP C -> T AC=2;AN=168;BQB=0.999999;DP=3094;DP4=1307,1722,33,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.97717e-28;MQSB=0.723741;RPB=0.845281;SGB=-1.15556;VDB=0.230891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.3:10337587 chr03:010337587 0 W/10337587-10337587 FN3892-S SNP A -> T AC=1;AN=158;BQB=0.999708;DP=2240;DP4=1029,1084,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.6921e-06;MQSB=0.954482;RPB=0.869251;SGB=-34.1178;VDB=0.9965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.3:10337588 chr03:010337588 0 W/10337588-10337588 FN3892-S SNP A -> T AC=1;AN=158;BQB=0.913983;DP=2237;DP4=1053,1124,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000634701;MQSB=0.938236;RPB=0.0955914;SGB=13.8578;VDB=0.217488;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.3:10338869 chr03:010338869 0 W/10338869-10338869 FN510-S Single Base Substitution T-G INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3725-S.SNP.3:10339071 chr03:010339071 0 W/10339071-10339071 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.981787;DP=2921;DP4=1306,1428,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88538e-07;MQSB=0.974409;RPB=0.974457;SGB=53.6492;VDB=0.129369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.3:10339655 chr03:010339655 0 W/10339655-10339655 FN1309-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1309-S.SNP.3:10339656 chr03:010339656 0 W/10339656-10339656 FN1309-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1554-S.SNP.3:10343657 chr03:010343657 0 W/10343657-10343657 FN1554-S Single Base Substitution G-T INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2785-S.SNP.3:10344021 chr03:010344021 0 W/10344021-10344021 FN2785-S SNP G -> T AC=1;AN=198;BQB=0.233693;DP=4285;DP4=1755,2238,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.16339e-08;MQSB=0.727108;RPB=0.234183;SGB=63.3342;VDB=0.497141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.3:10347740 chr03:010347740 0 W/10347740-10347740 FN2639-S SNP T -> G AC=1;AN=200;BQB=0.636822;DP=4884;DP4=2368,2374,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88044e-16;MQSB=0.624612;RPB=0.960415;SGB=22.3313;VDB=0.904058;EFF=INTRON(MODIFIER||||899|LOC_Os03g18440|protein_coding|CODING|LOC_Os03g18440.1|7|1) FN458-S.SNP.3:10352673 chr03:010352673 0 W/10352673-10352673 FN458-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g18440 expressed protein SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN1745-S.SNP.3:10352975 chr03:010352975 0 W/10352975-10352975 FN1745-S SNP A -> G AC=1;AN=188;BQB=0.00332599;DP=4485;DP4=2478,1957,11,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52386e-09;MQSB=0.993461;RPB=0.64439;SGB=-214.621;VDB=0.256923;EFF=INTRON(MODIFIER||||899|LOC_Os03g18440|protein_coding|CODING|LOC_Os03g18440.1|18|1) FN972-S.SNP.3:10356203 chr03:010356203 0 W/10356203-10356203 FN972-S Single Base Substitution G-A INTRON HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1232-S.SNP.3:10359504 chr03:010359504 0 W/10359504-10359504 FN1232-S Single Base Substitution A-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3666-S.SNP.3:10363918 chr03:010363918 0 W/10363918-10363918 FN3666-S SNP A -> C AC=1;AN=190;BQB=0.613119;DP=2833;DP4=1707,967,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45568e-10;MQSB=0.932558;RPB=0.784276;SGB=11.8805;VDB=0.948152;EFF=INTRON(MODIFIER||||306|LOC_Os03g18480|protein_coding|CODING|LOC_Os03g18480.1|2|1) FN-84.SNP.3:10365414 chr03:010365414 0 W/10365414-10365414 FN-84 Single Base Substitution C-A INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN-84.SNP.3:10365415 chr03:010365415 0 W/10365415-10365415 FN-84 Single Base Substitution G-A INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN3504-S.SNP.3:10366811 chr03:010366811 0 W/10366811-10366811 FN3504-S SNP A -> T AC=1;AN=188;BQB=0.651957;DP=4522;DP4=2020,2307,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.25309e-10;MQSB=0.990795;RPB=0.514283;SGB=13.2547;VDB=0.801543;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.3:10367077 chr03:010367077 0 W/10367077-10367077 FN875-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g18490 RPGR, putative, expressed SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3869-S.SNP.3:10370130 chr03:010370130 0 W/10370130-10370130 FN3869-S SNP C -> A AC=2;AN=158;BQB=0.841678;DP=2607;DP4=1202,1274,19,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.68584e-23;MQSB=0.93557;RPB=0.724587;SGB=169.412;VDB=0.16655;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A126|167|LOC_Os03g18500|protein_coding|CODING|LOC_Os03g18500.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A126|167|LOC_Os03g18500|protein_coding|CODING|LOC_Os03g18500.2|3|1) FN2659-S.SNP.3:10370593 chr03:010370593 0 W/10370593-10370593 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.651859;DP=5088;DP4=2525,2330,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45325e-10;MQSB=0.955743;RPB=0.644844;SGB=61.9006;VDB=0.662765;EFF=INTRON(MODIFIER||||167|LOC_Os03g18500|protein_coding|CODING|LOC_Os03g18500.1|1|1),INTRON(MODIFIER||||167|LOC_Os03g18500|protein_coding|CODING|LOC_Os03g18500.2|1|1) FN2412.SNP.3:10384604 chr03:010384604 0 W/10384604-10384604 FN2412 SNP C -> T AC=1;AN=200;BQB=0.150633;DP=4778;DP4=2296,2222,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34625e-11;MQSB=0.997788;RPB=0.995615;SGB=95.7111;VDB=0.38439;EFF=INTRON(MODIFIER||||279|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.1|9|1),INTRON(MODIFIER||||264|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.2|9|1),INTRON(MODIFIER||||279|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.4|9|1) FN2440.SNP.3:10384718 chr03:010384718 0 W/10384718-10384718 FN2440 SNP A -> C AC=1;AN=200;BQB=0.774984;DP=4862;DP4=2177,2367,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00863e-19;MQSB=0.999534;RPB=0.520648;SGB=108.768;VDB=0.63561;EFF=INTRON(MODIFIER||||279|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.1|9|1),INTRON(MODIFIER||||264|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.2|9|1),INTRON(MODIFIER||||279|LOC_Os03g18540|protein_coding|CODING|LOC_Os03g18540.4|9|1) FN-301.SNP.3:10389022 chr03:010389022 0 W/10389022-10389022 FN-301 Single Base Substitution C-G INTRON HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN982-S.SNP.3:10396214 chr03:010396214 0 W/10396214-10396214 FN982-S Single Base Substitution G-A INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3600-S.SNP.3:10400058 chr03:010400058 0 W/10400058-10400058 FN3600-S SNP T -> C AC=1;AN=190;BQB=0.881679;DP=3027;DP4=1344,1567,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10653e-09;MQSB=0.930329;RPB=0.227634;SGB=58.2031;VDB=0.159953;EFF=INTERGENIC(MODIFIER||||||||||1) FN623-S.SNP.3:10400058 chr03:010400058 0 W/10400058-10400058 FN623-S Single Base Substitution T-C INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN4272-S.SNP.3:10401417 chr03:010401417 0 W/10401417-10401417 FN4272-S SNP C -> A AC=1;AN=170;BQB=0.985187;DP=2196;DP4=989,1153,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.9988e-09;MQSB=0.907727;RPB=0.997861;SGB=65.6427;VDB=0.472913;EFF=SPLICE_SITE_REGION(LOW||||387|LOC_Os03g18590|protein_coding|CODING|LOC_Os03g18590.1|8|1),INTRON(MODIFIER||||387|LOC_Os03g18590|protein_coding|CODING|LOC_Os03g18590.1|8|1) FN2486.SNP.3:10402328 chr03:010402328 0 W/10402328-10402328 FN2486 SNP T -> G AC=1;AN=200;BQB=0.470517;DP=4752;DP4=2364,1977,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.74959e-16;MQSB=0.999143;RPB=0.218493;SGB=118.737;VDB=0.414899;EFF=INTRON(MODIFIER||||387|LOC_Os03g18590|protein_coding|CODING|LOC_Os03g18590.1|5|1) FN2649-S.SNP.3:10402584 chr03:010402584 0 W/10402584-10402584 FN2649-S SNP C -> T AC=2;AN=200;BQB=0.959879;DP=5185;DP4=2729,2172,48,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.62977e-37;MQSB=0.934529;RPB=0.240787;SGB=302.944;VDB=0.827362;EFF=INTRON(MODIFIER||||387|LOC_Os03g18590|protein_coding|CODING|LOC_Os03g18590.1|4|1) FN417-S.SNP.3:10412903 chr03:010412903 0 W/10412903-10412903 FN417-S Single Base Substitution T-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1232-S.SNP.3:10413621 chr03:010413621 0 W/10413621-10413621 FN1232-S Single Base Substitution G-A INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2088-S.SNP.3:10420953 chr03:010420953 0 W/10420953-10420953 FN2088-S SNP C -> A AC=1;AN=168;BQB=0.0475871;DP=4091;DP4=2091,1970,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05278e-06;MQSB=0.94717;RPB=0.996855;SGB=-37.2282;VDB=0.40526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.3:10428417 chr03:010428417 0 W/10428417-10428417 FN2577-S SNP C -> A AC=2;AN=198;BQB=0.939904;DP=3802;DP4=1776,1821,13,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.08271e-17;MQSB=0.991634;RPB=0.952956;SGB=108.456;VDB=0.590525;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.3:10429488 chr03:010429488 0 W/10429488-10429488 FN886-S Single Base Substitution C-T INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN4190-S.SNP.3:10434228 chr03:010434228 0 W/10434228-10434228 FN4190-S SNP G -> A AC=2;AN=170;BQB=0.999992;DP=2510;DP4=1416,952,9,3;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.04933e-08;MQSB=0.752415;RPB=0.521879;SGB=47.8722;VDB=0.641244;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.3:10434241 chr03:010434241 0 W/10434241-10434241 FN4190-S SNP C -> T AC=2;AN=170;BQB=0.992165;DP=2371;DP4=1408,749,11,2;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.27313e-07;MQSB=0.929447;RPB=0.96241;SGB=52.3148;VDB=0.986503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.3:10438218 chr03:010438218 0 W/10438218-10438218 FN1452-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g18630 receptor-like kinase RHG1, putative, expressed SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2488.SNP.3:10441100 chr03:010441100 0 W/10441100-10441100 FN2488 SNP A -> G AC=1;AN=200;BQB=0.976296;DP=4780;DP4=2267,2196,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77278e-08;MQSB=0.771944;RPB=0.217548;SGB=33.0593;VDB=0.159685;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.3:10444479 chr03:010444479 0 W/10444479-10444479 FN587-S Single Base Substitution T-A INTRON HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2475.SNP.3:10446944 chr03:010446944 0 W/10446944-10446944 FN2475 SNP G -> T AC=1;AN=200;BQB=0.962872;DP=4259;DP4=2004,1898,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50483e-09;MQSB=0.83907;RPB=0.376216;SGB=51.0851;VDB=0.303408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1411-S.SNP.3:10449382 chr03:010449382 0 W/10449382-10449382 FN1411-S Single Base Substitution A-G INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN1018-S.SNP.3:10468940 chr03:010468940 0 W/10468940-10468940 FN1018-S Single Base Substitution T-A INTRON HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2706-S.SNP.3:10470862 chr03:010470862 0 W/10470862-10470862 FN2706-S SNP T -> G AC=1;AN=200;BQB=0.1672;DP=4978;DP4=2460,2292,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48887e-08;MQSB=0.980033;RPB=0.704797;SGB=32.0901;VDB=0.635772;EFF=UTR_3_PRIME(MODIFIER||305||1303|LOC_Os03g18710|protein_coding|CODING|LOC_Os03g18710.1|9|1) FN-269.SNP.3:10482132 chr03:010482132 0 W/10482132-10482132 FN-269 Single Base Substitution C-T INTRON HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1018-S.SNP.3:10482860 chr03:010482860 0 W/10482860-10482860 FN1018-S Single Base Substitution G-C INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2739-S.SNP.3:10496340 chr03:010496340 0 W/10496340-10496340 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.970174;DP=4645;DP4=2065,2281,16,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.90032e-18;MQSB=0.00110957;RPB=0.764095;SGB=71.1676;VDB=0.380318;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.3:10498721 chr03:010498721 0 W/10498721-10498721 FN466-S Single Base Substitution T-C INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN2142-S.SNP.3:10505702 chr03:010505702 0 W/10505702-10505702 FN2142-S SNP C -> T AC=2;AN=168;BQB=0.313659;DP=3640;DP4=1592,1987,25,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.50632e-23;MQSB=0.939553;RPB=0.776951;SGB=-4.17128;VDB=0.92737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.3:10509087 chr03:010509087 0 W/10509087-10509087 FN1732-S SNP G -> A AC=1;AN=188;BQB=0.623349;DP=1173;DP4=209,898,1,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000852515;MQB=0.000140845;MQSB=0.000793835;RPB=0.35152;SGB=26.2637;VDB=0.107028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.3:10509251 chr03:010509251 0 W/10509251-10509251 FN3949-S SNP C -> T AC=1;AN=168;BQB=0.602369;DP=1386;DP4=467,737,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00143201;MQSB=0.958642;RPB=0.833253;SGB=17.5943;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.3:10509817 chr03:010509817 0 W/10509817-10509817 FN_769-4-1 Single Base Substitution C-T HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2573-S.SNP.3:10509918 chr03:010509918 0 W/10509918-10509918 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.999424;DP=3900;DP4=2206,1482,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.80334e-06;MQSB=0.477591;RPB=0.998198;SGB=40.3588;VDB=0.675225;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.3:10512598 chr03:010512598 0 W/10512598-10512598 W276-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2210-S.SNP.3:10514901 chr03:010514901 0 W/10514901-10514901 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.994186;DP=3869;DP4=1803,1774,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0703024;MQB=0.902451;MQSB=4.57461e-27;RPB=0.816379;SGB=35.4339;VDB=0.240575;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.3:10515264 chr03:010515264 0 W/10515264-10515264 FN4150-S SNP T -> A AC=1;AN=170;BQB=0.965678;DP=2374;DP4=961,1305,10,12;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0400168;MQB=0.224278;MQSB=3.6753e-24;RPB=0.0413083;SGB=92.2986;VDB=0.00577854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.3:10515348 chr03:010515348 0 W/10515348-10515348 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.129787;DP=1589;DP4=796,752,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.269352;MQB=0.422051;MQSB=0;RPB=0.952965;SGB=2.75988;VDB=0.428916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.3:10515349 chr03:010515349 0 W/10515349-10515349 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.164558;DP=1582;DP4=788,748,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.266751;MQB=0.180135;MQSB=0;RPB=0.956722;SGB=-16.2342;VDB=0.155125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.3:10516143 chr03:010516143 0 W/10516143-10516143 FN2149-S SNP A -> G AC=1;AN=168;BQB=0.463897;DP=3304;DP4=1812,1447,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.7061e-09;MQSB=0.889948;RPB=0.779092;SGB=-14.0801;VDB=0.405921;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.3:10524744 chr03:010524744 0 W/10524744-10524744 FN-93 Single Base Substitution C-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1423-S.SNP.3:10531968 chr03:010531968 0 W/10531968-10531968 FN1423-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1085-S.SNP.3:10539211 chr03:010539211 0 W/10539211-10539211 FN1085-S Single Base Substitution G-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN577-S.SNP.3:10539950 chr03:010539950 0 W/10539950-10539950 FN577-S Single Base Substitution C-T INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3829-S.SNP.3:10541413 chr03:010541413 0 W/10541413-10541413 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.926429;DP=2770;DP4=1332,1327,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.89366e-07;MQSB=0.00427095;RPB=0.958324;SGB=28.9929;VDB=0.692876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.3:10557804 chr03:010557804 0 W/10557804-10557804 FN2266-S SNP T -> G AC=2;AN=190;BQB=0.998245;DP=5416;DP4=2702,2465,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.264e-16;MQSB=0.615973;RPB=0.611591;SGB=92.9626;VDB=0.914914;EFF=INTRON(MODIFIER||||637|LOC_Os03g18840|protein_coding|CODING|LOC_Os03g18840.1|4|1) FN4279-S.SNP.3:10571913 chr03:010571913 0 W/10571913-10571913 FN4279-S SNP C -> T AC=2;AN=170;BQB=0.7762;DP=2562;DP4=1105,1362,14,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08072e-14;MQSB=0.617897;RPB=0.465711;SGB=101.184;VDB=0.0293253;EFF=UTR_3_PRIME(MODIFIER||188||166|LOC_Os03g18870|protein_coding|CODING|LOC_Os03g18870.1|5|1) FN1626-S.SNP.3:10573953 chr03:010573953 0 W/10573953-10573953 FN1626-S SNP T -> A AC=1;AN=188;BQB=0.346676;DP=3552;DP4=1911,1593,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52451e-12;MQSB=0.896173;RPB=0.724239;SGB=-42.845;VDB=0.963702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.3:10576946 chr03:010576946 0 W/10576946-10576946 FN1257-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2609-S.SNP.3:10581533 chr03:010581533 0 W/10581533-10581533 FN2609-S SNP G -> A AC=1;AN=198;BQB=1;DP=4329;DP4=2139,1979,17,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.60954e-21;MQSB=0.486445;RPB=0.501541;SGB=122.837;VDB=0.66177;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.3:10586292 chr03:010586292 0 W/10586292-10586292 FN4142-S SNP A -> G AC=1;AN=170;BQB=0.684442;DP=2705;DP4=1192,1432,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=4.82254e-07;MQSB=0.928971;RPB=0.984133;SGB=27.2119;VDB=0.86747;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.3:10590769 chr03:010590769 0 W/10590769-10590769 FN773-S Single Base Substitution C-T INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1433-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN1433-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1715-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN1715-S SNP G -> T AC=1;AN=188;BQB=0.984392;DP=3170;DP4=990,2143,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.97006e-09;MQSB=0.809845;RPB=0.988443;SGB=33.7061;VDB=0.0614486;EFF=UTR_3_PRIME(MODIFIER||112||246|LOC_Os03g18900|protein_coding|CODING|LOC_Os03g18900.1|1|1) FN2164-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN2164-S SNP G -> T AC=2;AN=168;BQB=0.0257742;DP=3232;DP4=1136,2034,12,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.17091e-14;MQSB=0.982868;RPB=0.195166;SGB=-8.04863;VDB=0.367489;EFF=UTR_3_PRIME(MODIFIER||112||246|LOC_Os03g18900|protein_coding|CODING|LOC_Os03g18900.1|1|1) FN3485-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN3485-S SNP G -> T AC=1;AN=184;BQB=0.971278;DP=3011;DP4=1777,1147,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34399e-08;MQSB=0.884354;RPB=0.922056;SGB=53.2642;VDB=0.755921;EFF=UTR_3_PRIME(MODIFIER||112||246|LOC_Os03g18900|protein_coding|CODING|LOC_Os03g18900.1|1|1) FN3821-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.988049;DP=2790;DP4=1599,1090,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51148e-09;MQSB=0.921829;RPB=0.865973;SGB=46.7622;VDB=0.537893;EFF=UTR_3_PRIME(MODIFIER||112||246|LOC_Os03g18900|protein_coding|CODING|LOC_Os03g18900.1|1|1) FN395-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN395-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN806-S.SNP.3:10591478 chr03:010591478 0 W/10591478-10591478 FN806-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN969-S.SNP.3:10595725 chr03:010595725 0 W/10595725-10595725 FN969-S Single Base Substitution G-A INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN969-S.SNP.3:10595726 chr03:010595726 0 W/10595726-10595726 FN969-S Single Base Substitution G-A INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN1615-S.SNP.3:10613824 chr03:010613824 0 W/10613824-10613824 FN1615-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os03g18950 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3503-S.SNP.3:10623965 chr03:010623965 0 W/10623965-10623965 FN3503-S SNP C -> G AC=1;AN=188;BQB=0.97042;DP=2892;DP4=1398,1403,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.21819e-05;MQSB=0.95897;RPB=0.908507;SGB=26.2637;VDB=0.499424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgC|W253C|432|LOC_Os03g18970|protein_coding|CODING|LOC_Os03g18970.1|5|1) FN3555-S.SNP.3:10645047 chr03:010645047 0 W/10645047-10645047 FN3555-S SNP T -> A AC=2;AN=188;BQB=0.929582;DP=3231;DP4=1449,1582,14,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3681e-22;MQSB=0.946578;RPB=0.992492;SGB=189.821;VDB=0.744683;EFF=INTRON(MODIFIER||||293|LOC_Os03g18990|protein_coding|CODING|LOC_Os03g18990.1|4|1) FN4036-S.SNP.3:10645392 chr03:010645392 0 W/10645392-10645392 FN4036-S SNP A -> G AC=2;AN=168;BQB=0.998869;DP=2758;DP4=1469,1090,9,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.43863e-11;MQSB=0.927121;RPB=0.295555;SGB=44.0621;VDB=0.466002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.3:10650376 chr03:010650376 0 W/10650376-10650376 FN3592-S SNP T -> A AC=1;AN=188;BQB=0.973974;DP=2898;DP4=1474,1316,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.62311e-05;MQSB=0.757026;RPB=0.997899;SGB=30.8063;VDB=0.0625989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1350-S.SNP.3:10663136 chr03:010663136 0 W/10663136-10663136 FN1350-S Single Base Substitution C-T INTRON HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN601-S.SNP.3:10677023 chr03:010677023 0 W/10677023-10677023 FN601-S Single Base Substitution T-C INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3387-S.SNP.3:10680431 chr03:010680431 0 W/10680431-10680431 FN3387-S SNP A -> G AC=1;AN=184;BQB=0.991699;DP=2863;DP4=1343,1428,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.03881e-08;MQSB=0.999969;RPB=0.866671;SGB=39.2697;VDB=0.971346;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.3:10690475 chr03:010690475 0 W/10690475-10690475 FN558-S Single Base Substitution C-T INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN558-S.SNP.3:10690476 chr03:010690476 0 W/10690476-10690476 FN558-S Single Base Substitution A-T INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN1040-S.SNP.3:10694595 chr03:010694595 0 W/10694595-10694595 FN1040-S Single Base Substitution G-A INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN661-S.SNP.3:10703114 chr03:010703114 0 W/10703114-10703114 FN661-S Single Base Substitution G-T INTRON HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN-169.SNP.3:10704768 chr03:010704768 0 W/10704768-10704768 FN-169 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g19104 retrotransposon protein, putative, unclassified, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-202.SNP.3:10704768 chr03:010704768 0 W/10704768-10704768 FN-202 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g19104 retrotransposon protein, putative, unclassified, expressed SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3964-S.SNP.3:10705961 chr03:010705961 0 W/10705961-10705961 FN3964-S SNP C -> A AC=1;AN=168;BQB=0.912944;DP=2624;DP4=1163,1276,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000762195;MQB=2.76345e-13;MQSB=0.991008;RPB=0.250118;SGB=-71.2065;VDB=0.527601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.3:10711559 chr03:010711559 0 W/10711559-10711559 FN3305-S SNP G -> A AC=2;AN=184;BQB=0.992603;DP=2895;DP4=1282,1486,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.91572e-13;MQSB=0.998024;RPB=0.975823;SGB=70.9657;VDB=0.49547;EFF=INTRON(MODIFIER||||358|LOC_Os03g19120|protein_coding|CODING|LOC_Os03g19120.1|2|1) FN2676-S.SNP.3:10714486 chr03:010714486 0 W/10714486-10714486 FN2676-S SNP C -> G AC=1;AN=200;BQB=0.929927;DP=5192;DP4=2380,2556,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.92446e-10;MQSB=0.978642;RPB=0.298563;SGB=24.2746;VDB=0.0489425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.3:10719457 chr03:010719457 0 W/10719457-10719457 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.900232;DP=2553;DP4=1107,1282,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67978e-05;MQSB=0.975606;RPB=0.947709;SGB=30.6558;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1433-S.SNP.3:10719499 chr03:010719499 0 W/10719499-10719499 FN1433-S Single Base Substitution A-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN-146.SNP.3:10726486 chr03:010726486 0 W/10726486-10726486 FN-146 Single Base Substitution T-C INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2313.SNP.3:10727368 chr03:010727368 0 W/10727368-10727368 FN2313 SNP C -> T AC=1;AN=192;BQB=0.807032;DP=2925;DP4=1539,1247,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.56845e-06;MQSB=1.97942e-15;RPB=0.798858;SGB=62.9035;VDB=0.0434007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.3:10731444 chr03:010731444 0 W/10731444-10731444 FN3442-S SNP C -> A AC=2;AN=184;BQB=0.9913;DP=2641;DP4=1067,1472,9,10;HOB=0.0215028;ICB=0.494625;MQ=32;MQ0F=0.157516;MQB=0.9984;MQSB=0;RPB=0.592992;SGB=80.3949;VDB=0.860319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.3:10736416 chr03:010736416 0 W/10736416-10736416 FN1162-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN-22.SNP.3:10738802 chr03:010738802 0 W/10738802-10738802 FN-22 Single Base Substitution T-C INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3761-S.SNP.3:10742351 chr03:010742351 0 W/10742351-10742351 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.937816;DP=3576;DP4=2054,1418,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.408837;MQB=0.0357104;MQSB=0;RPB=0.740533;SGB=57.4238;VDB=0.615901;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T757M|1393|LOC_Os03g19160|protein_coding|CODING|LOC_Os03g19160.1|2|1) FN849-S.SNP.3:10751825 chr03:010751825 0 W/10751825-10751825 FN849-S Single Base Substitution A-T INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2771-S.SNP.3:10766087 chr03:010766087 0 W/10766087-10766087 FN2771-S SNP A -> G AC=1;AN=198;BQB=0.91331;DP=4234;DP4=1855,2191,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.86828e-05;MQSB=0.773756;RPB=0.493021;SGB=54.144;VDB=0.319457;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.3:10777089 chr03:010777089 0 W/10777089-10777089 FN4204-S SNP T -> G AC=1;AN=170;BQB=0.913727;DP=2111;DP4=878,1168,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05417e-09;MQSB=0.987551;RPB=0.995963;SGB=48.6486;VDB=0.743141;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.3:10778871 chr03:010778871 0 W/10778871-10778871 FN782-S Single Base Substitution G-A INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN-91.SNP.3:10781489 chr03:010781489 0 W/10781489-10781489 FN-91 Single Base Substitution A-G INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN3834-S.SNP.3:10785461 chr03:010785461 0 W/10785461-10785461 FN3834-S SNP G -> T AC=1;AN=190;BQB=0.988024;DP=3171;DP4=1416,1614,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.22341e-05;MQSB=0.920904;RPB=0.781425;SGB=21.8853;VDB=0.732492;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.3:10789482 chr03:010789482 0 W/10789482-10789482 FN-70 Single Base Substitution A-C INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN3358-S.SNP.3:10790156 chr03:010790156 0 W/10790156-10790156 FN3358-S SNP G -> T AC=2;AN=184;BQB=0.914126;DP=3147;DP4=1538,1502,12,17;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.000317763;MQB=6.01501e-06;MQSB=0.718629;RPB=0.0215399;SGB=92.0965;VDB=0.0438486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-S.SNP.3:10796898 chr03:010796898 0 W/10796898-10796898 FN1156-S Single Base Substitution A-G INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2486.SNP.3:10808742 chr03:010808742 0 W/10808742-10808742 FN2486 SNP T -> C AC=1;AN=200;BQB=0.537985;DP=4876;DP4=2220,2159,20,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14728e-14;MQSB=1;RPB=0.88577;SGB=-83.4175;VDB=0.529997;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.3:10819536 chr03:010819536 0 W/10819536-10819536 FN819-S Single Base Substitution C-T INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2617-S.SNP.3:10819573 chr03:010819573 0 W/10819573-10819573 FN2617-S SNP T -> A AC=1;AN=198;BQB=0.856345;DP=4110;DP4=1973,1863,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.91973e-10;MQSB=0.99073;RPB=0.999387;SGB=43.7442;VDB=0.978709;EFF=INTRON(MODIFIER||||567|LOC_Os03g19240|protein_coding|CODING|LOC_Os03g19240.1|1|1) FN3698-S.SNP.3:10826956 chr03:010826956 0 W/10826956-10826956 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.899861;DP=2979;DP4=1185,1658,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50355e-05;MQSB=0.840543;RPB=0.999983;SGB=49.0954;VDB=0.100499;EFF=INTRON(MODIFIER||||574|LOC_Os03g19250|protein_coding|CODING|LOC_Os03g19250.1|1|1) FN1220-S.SNP.3:10839269 chr03:010839269 0 W/10839269-10839269 FN1220-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN483-S.SNP.3:10846547 chr03:010846547 0 W/10846547-10846547 FN483-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2491.SNP.3:10857045 chr03:010857045 0 W/10857045-10857045 FN2491 SNP G -> C AC=1;AN=200;BQB=0.96579;DP=5293;DP4=2296,2688,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000188929;MQB=5.79232e-05;MQSB=0.998942;RPB=0.638871;SGB=22.2439;VDB=0.215477;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.3:10869565 chr03:010869565 0 W/10869565-10869565 FN517-S Single Base Substitution G-A INTRON HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN896-S.SNP.3:10892362 chr03:010892362 0 W/10892362-10892362 FN896-S Single Base Substitution A-G INTRON HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN942-S.SNP.3:10901432 chr03:010901432 0 W/10901432-10901432 FN942-S Single Base Substitution T-G INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2750-S.SNP.3:10904147 chr03:010904147 0 W/10904147-10904147 FN2750-S SNP A -> T AC=2;AN=200;BQB=0.595758;DP=5007;DP4=2399,2364,19,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.27569e-22;MQSB=0.996225;RPB=0.825327;SGB=81.5883;VDB=0.905171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.3:10922828 chr03:010922828 0 W/10922828-10922828 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.892456;DP=2401;DP4=1107,1231,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02029e-10;MQSB=0.990512;RPB=0.482852;SGB=25.7969;VDB=0.0276731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R686C|938|LOC_Os03g19410|protein_coding|CODING|LOC_Os03g19410.1|9|1) FN760-S.SNP.3:10924591 chr03:010924591 0 W/10924591-10924591 FN760-S Single Base Substitution A-G INTRON HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3363-S.SNP.3:10935157 chr03:010935157 0 W/10935157-10935157 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.841191;DP=3389;DP4=1349,1927,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.56371e-05;MQSB=0.649245;RPB=0.926538;SGB=44.2207;VDB=0.995238;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.3:10944503 chr03:010944503 0 W/10944503-10944503 FN845-S Single Base Substitution T-A INTRON HOMO SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3899-S.SNP.3:10946295 chr03:010946295 0 W/10946295-10946295 FN3899-S SNP T -> G AC=2;AN=158;BQB=0.183327;DP=2267;DP4=1164,1029,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.66682e-09;MQSB=0.95091;RPB=0.747959;SGB=86.3921;VDB=0.947699;EFF=INTRON(MODIFIER||||590|LOC_Os03g19462|protein_coding|CODING|LOC_Os03g19462.1|3|1) FN3370-S.SNP.3:10947490 chr03:010947490 0 W/10947490-10947490 FN3370-S SNP A -> G AC=1;AN=184;BQB=0.99378;DP=2853;DP4=1683,1088,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.86175e-07;MQSB=0.734571;RPB=0.893783;SGB=28.7043;VDB=0.421703;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K568E|590|LOC_Os03g19462|protein_coding|CODING|LOC_Os03g19462.1|5|1) FN1760-S.SNP.3:10949197 chr03:010949197 0 W/10949197-10949197 FN1760-S SNP C -> G AC=1;AN=188;BQB=0.0268944;DP=2803;DP4=1035,1722,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.64784e-07;MQSB=0.892175;RPB=0.304434;SGB=-181.881;VDB=0.43151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.3:10955100 chr03:010955100 0 W/10955100-10955100 FN1916 Single Base Substitution A-G Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2554-S.SNP.3:10961508 chr03:010961508 0 W/10961508-10961508 FN2554-S SNP T -> C AC=1;AN=198;BQB=1;DP=4176;DP4=1917,1941,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.11139e-08;MQSB=0.968521;RPB=0.173198;SGB=47.3393;VDB=0.449535;EFF=UTR_3_PRIME(MODIFIER||1234||150|LOC_Os03g19490|protein_coding|CODING|LOC_Os03g19490.1|1|1) FN892-S.SNP.3:10981788 chr03:010981788 0 W/10981788-10981788 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2239-S.SNP.3:10983898 chr03:010983898 0 W/10983898-10983898 FN2239-S SNP A -> T AC=2;AN=190;BQB=0.179681;DP=5211;DP4=2162,2512,17,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10949e-26;MQSB=0.817921;RPB=0.999652;SGB=-48.3698;VDB=0.194084;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.3:10988044 chr03:010988044 0 W/10988044-10988044 FN459-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g19530 DEAD-box ATP-dependent RNA helicase, putative, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN459-S.SNP.3:10988047 chr03:010988047 0 W/10988047-10988047 FN459-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g19530 DEAD-box ATP-dependent RNA helicase, putative, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN897-S.SNP.3:10988430 chr03:010988430 0 W/10988430-10988430 FN897-S Single Base Substitution G-A INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2155-S.SNP.3:11012819 chr03:011012819 0 W/11012819-11012819 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.0195152;DP=3581;DP4=1351,2182,15,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.21222e-12;MQSB=0.997224;RPB=0.340958;SGB=-90.0367;VDB=0.633511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.3:11015129 chr03:011015129 0 W/11015129-11015129 FN3842-S SNP A -> G AC=1;AN=190;BQB=0.994819;DP=2449;DP4=1170,1143,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08123e-08;MQSB=0.927006;RPB=0.555796;SGB=62.7569;VDB=0.490473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.3:11015898 chr03:011015898 0 W/11015898-11015898 FN3339-S SNP C -> T AC=2;AN=184;BQB=0.644739;DP=3217;DP4=1564,1557,9,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02948e-05;MQSB=0.986164;RPB=0.901485;SGB=57.786;VDB=0.707027;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.3:11016083 chr03:011016083 0 W/11016083-11016083 FN_809-6-1 Single Base Substitution T-C Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2753-S.SNP.3:11016643 chr03:011016643 0 W/11016643-11016643 FN2753-S SNP G -> A AC=2;AN=200;BQB=0.680044;DP=5245;DP4=2401,2520,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83483e-23;MQSB=0.981391;RPB=0.983477;SGB=137.609;VDB=0.459089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.3:11016666 chr03:011016666 0 W/11016666-11016666 FN3463-S SNP C -> G AC=1;AN=184;BQB=0.992378;DP=2589;DP4=1226,1252,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.34694e-05;MQSB=0.798202;RPB=0.698462;SGB=26.1347;VDB=0.922194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.3:11017645 chr03:011017645 0 W/11017645-11017645 FN4001-S SNP A -> T AC=1;AN=168;BQB=0.745967;DP=2610;DP4=1263,1194,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.667e-07;MQSB=0.927077;RPB=0.581129;SGB=19.7539;VDB=0.199423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.3:11018106 chr03:011018106 0 W/11018106-11018106 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.991517;DP=5214;DP4=2304,2585,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02729e-15;MQSB=0.957132;RPB=0.950251;SGB=-71.8882;VDB=0.886809;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.3:11021226 chr03:011021226 0 W/11021226-11021226 FN828-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g19590 phytochrome B, putative, expressed SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN576-S.SNP.3:11032294 chr03:011032294 0 W/11032294-11032294 FN576-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g19600 retrotransposon protein, putative, unclassified, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3454-S.SNP.3:11036438 chr03:011036438 0 W/11036438-11036438 FN3454-S SNP T -> A AC=2;AN=184;BQB=0.669389;DP=2918;DP4=1472,1292,17,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.0003427;MQB=7.3129e-11;MQSB=0.518626;RPB=0.997713;SGB=85.0529;VDB=0.788957;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.3:11048680 chr03:011048680 0 W/11048680-11048680 FN597-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g19650 PPR2, putative, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1136-S.SNP.3:11048938 chr03:011048938 0 W/11048938-11048938 FN1136-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g19650 PPR2, putative, expressed SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN4247-S.SNP.3:11053574 chr03:011053574 0 W/11053574-11053574 FN4247-S SNP C -> T AC=1;AN=170;BQB=0.920659;DP=2564;DP4=1299,1123,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.55416e-06;MQSB=0.799369;RPB=0.647412;SGB=56.7575;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.3:11053618 chr03:011053618 0 W/11053618-11053618 FN2709-S SNP A -> G AC=1;AN=200;BQB=0.966057;DP=4735;DP4=2086,2360,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02214e-07;MQSB=0.993312;RPB=0.962527;SGB=51.0851;VDB=0.385174;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.3:11055598 chr03:011055598 0 W/11055598-11055598 FN856-S Single Base Substitution G-C INTERGENIC HOMO SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2534-S.SNP.3:11061730 chr03:011061730 0 W/11061730-11061730 FN2534-S SNP C -> G AC=1;AN=198;BQB=0.507246;DP=4313;DP4=1917,2078,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.41345e-08;MQSB=0.135556;RPB=0.629759;SGB=24.1541;VDB=0.111591;EFF=INTRON(MODIFIER||||367|LOC_Os03g19670|protein_coding|CODING|LOC_Os03g19670.1|4|1),INTRON(MODIFIER||||281|LOC_Os03g19670|protein_coding|CODING|LOC_Os03g19670.2|4|1) FN623-S.SNP.3:11063454 chr03:011063454 0 W/11063454-11063454 FN623-S Single Base Substitution T-A INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN4120-S.SNP.3:11065256 chr03:011065256 0 W/11065256-11065256 FN4120-S SNP G -> T AC=1;AN=182;BQB=0.688495;DP=2055;DP4=1093,894,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=0.0212116;MQSB=0.993528;RPB=0.116383;SGB=35.0899;VDB=0.495905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.3:11069172 chr03:011069172 0 W/11069172-11069172 FN2618-S SNP G -> T AC=1;AN=198;BQB=0.611858;DP=3972;DP4=2069,1673,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.69583e-11;MQSB=0.0816382;RPB=0.0361348;SGB=47.5102;VDB=0.0803234;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R74|312|LOC_Os03g19680|protein_coding|CODING|LOC_Os03g19680.1|1|1) FN1619-S.SNP.3:11076762 chr03:011076762 0 W/11076762-11076762 FN1619-S Single Base Substitution C-T INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2721-S.SNP.3:11079542 chr03:011079542 0 W/11079542-11079542 FN2721-S SNP G -> A AC=2;AN=200;BQB=0.722331;DP=5139;DP4=2422,2361,25,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.68781e-28;MQSB=0.976635;RPB=0.790832;SGB=57.645;VDB=0.171546;EFF=INTRON(MODIFIER||||817|LOC_Os03g19690|protein_coding|CODING|LOC_Os03g19690.1|12|1),INTRON(MODIFIER||||742|LOC_Os03g19690|protein_coding|CODING|LOC_Os03g19690.2|12|1) FN593-S.SNP.3:11083115 chr03:011083115 0 W/11083115-11083115 FN593-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1423-S.SNP.3:11092757 chr03:011092757 0 W/11092757-11092757 FN1423-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1452-S.SNP.3:11097630 chr03:011097630 0 W/11097630-11097630 FN1452-S Single Base Substitution G-C INTRON HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2379.SNP.3:11106272 chr03:011106272 0 W/11106272-11106272 FN2379 SNP C -> G AC=1;AN=192;BQB=0.192748;DP=4797;DP4=2464,2011,20,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.40995e-15;MQSB=0.686687;RPB=0.594909;SGB=-71.6791;VDB=0.594261;EFF=INTRON(MODIFIER||||1064|LOC_Os03g19760|protein_coding|CODING|LOC_Os03g19760.1|1|1),INTRON(MODIFIER||||770|LOC_Os03g19760|protein_coding|CODING|LOC_Os03g19760.2|1|1|WARNING_TRANSCRIPT_INCOMPLETE) FN-165.SNP.3:11114917 chr03:011114917 0 W/11114917-11114917 FN-165 Single Base Substitution T-A INTRON HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN4204-S.SNP.3:11119568 chr03:011119568 0 W/11119568-11119568 FN4204-S SNP C -> G AC=1;AN=170;BQB=0.735303;DP=2641;DP4=1266,1174,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.68115e-08;MQSB=0.908385;RPB=0.703213;SGB=31.4354;VDB=0.287329;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Gat|H810D|1064|LOC_Os03g19760|protein_coding|CODING|LOC_Os03g19760.1|21|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S750R|770|LOC_Os03g19760|protein_coding|CODING|LOC_Os03g19760.2|20|1|WARNING_TRANSCRIPT_INCOMPLETE) FN1553-S.SNP.3:11122753 chr03:011122753 0 W/11122753-11122753 FN1553-S Single Base Substitution T-A INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN-285.SNP.3:11123219 chr03:011123219 0 W/11123219-11123219 FN-285 Single Base Substitution A-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1723-S.SNP.3:11127483 chr03:011127483 0 W/11127483-11127483 FN1723-S SNP C -> T AC=1;AN=188;BQB=0.617788;DP=1028;DP4=493,479,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00213105;MQSB=0.147;RPB=0.429901;SGB=18.2682;VDB=0.351291;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.3:11130380 chr03:011130380 0 W/11130380-11130380 FN912-S Single Base Substitution A-C INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN593-S.SNP.3:11131483 chr03:011131483 0 W/11131483-11131483 FN593-S Single Base Substitution T-A INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-20.SNP.3:11134227 chr03:011134227 0 W/11134227-11134227 FN-20 Single Base Substitution A-G INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN2611-S.SNP.3:11136730 chr03:011136730 0 W/11136730-11136730 FN2611-S SNP T -> G AC=1;AN=200;BQB=0.883941;DP=4620;DP4=2340,1956,25,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.27701e-20;MQSB=0.988177;RPB=0.926057;SGB=0.203511;VDB=0.652348;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.3:11141584 chr03:011141584 0 W/11141584-11141584 FN1053-S Single Base Substitution A-T INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1053-S.SNP.3:11141590 chr03:011141590 0 W/11141590-11141590 FN1053-S Single Base Substitution A-G INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN416-S.SNP.3:11142640 chr03:011142640 0 W/11142640-11142640 FN416-S Single Base Substitution C-T INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN779-S.SNP.3:11142915 chr03:011142915 0 W/11142915-11142915 FN779-S Single Base Substitution G-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2114-S.SNP.3:11153328 chr03:011153328 0 W/11153328-11153328 FN2114-S SNP C -> A AC=2;AN=168;BQB=0.734778;DP=3675;DP4=1799,1804,15,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000272109;MQB=1.98949e-11;MQSB=0.909828;RPB=0.956137;SGB=-42.92;VDB=0.0236697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.3:11154091 chr03:011154091 0 W/11154091-11154091 FN2637-S SNP C -> A AC=1;AN=200;BQB=0.620734;DP=4666;DP4=2263,2089,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.99185e-09;MQSB=0.612345;RPB=0.207146;SGB=21.6694;VDB=0.2458;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.3:11171011 chr03:011171011 0 W/11171011-11171011 FN788-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g19860 expressed protein SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN714-S.SNP.3:11171665 chr03:011171665 0 W/11171665-11171665 FN714-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3658-S.SNP.3:11173501 chr03:011173501 0 W/11173501-11173501 FN3658-S SNP G -> A AC=2;AN=190;BQB=0.990202;DP=2838;DP4=1351,1388,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.05059e-13;MQSB=0.999014;RPB=0.905882;SGB=64.5316;VDB=0.595093;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T195|396|LOC_Os03g19870|protein_coding|CODING|LOC_Os03g19870.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T195|396|LOC_Os03g19870|protein_coding|CODING|LOC_Os03g19870.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T195|396|LOC_Os03g19870|protein_coding|CODING|LOC_Os03g19870.3|4|1) FN1385-S.SNP.3:11174847 chr03:011174847 0 W/11174847-11174847 FN1385-S Single Base Substitution C-G UTR_3_PRIME HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3738-S.SNP.3:11182447 chr03:011182447 0 W/11182447-11182447 FN3738-S SNP A -> G AC=2;AN=190;BQB=0.810189;DP=2273;DP4=919,1191,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.77848e-13;MQSB=0.898223;RPB=0.962558;SGB=21.2038;VDB=0.772379;EFF=INTRON(MODIFIER||||173|LOC_Os03g19890|protein_coding|CODING|LOC_Os03g19890.1|1|1) FN1419-S.SNP.3:11197498 chr03:011197498 0 W/11197498-11197498 FN1419-S Single Base Substitution C-G INTRON HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN472-S.SNP.3:11198722 chr03:011198722 0 W/11198722-11198722 FN472-S Single Base Substitution T-C INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2246-S.SNP.3:11200373 chr03:011200373 0 W/11200373-11200373 FN2246-S SNP C -> T AC=2;AN=190;BQB=0.306589;DP=4717;DP4=2261,2136,21,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.36396e-20;MQSB=0.640301;RPB=0.839926;SGB=32.0809;VDB=0.0388179;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R429H|546|LOC_Os03g19920|protein_coding|CODING|LOC_Os03g19920.1|9|1) FN2246-S.SNP.3:11200374 chr03:011200374 0 W/11200374-11200374 FN2246-S SNP G -> T AC=2;AN=190;BQB=0.241919;DP=4729;DP4=2331,2123,19,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.50525e-21;MQSB=0.812598;RPB=0.68933;SGB=32.0809;VDB=0.0572654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R429S|546|LOC_Os03g19920|protein_coding|CODING|LOC_Os03g19920.1|9|1) FN2246-S.SNP.3:11200375 chr03:011200375 0 W/11200375-11200375 FN2246-S SNP A -> T AC=2;AN=190;BQB=0.262787;DP=4728;DP4=2354,2097,20,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000211506;MQB=1.13425e-20;MQSB=0.795361;RPB=0.995433;SGB=103.624;VDB=0.0684314;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F428L|546|LOC_Os03g19920|protein_coding|CODING|LOC_Os03g19920.1|9|1) FN3657-S.SNP.3:11200936 chr03:011200936 0 W/11200936-11200936 FN3657-S SNP A -> T AC=1;AN=190;BQB=0.966176;DP=3003;DP4=1315,1570,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58084e-07;MQSB=0.972424;RPB=0.994146;SGB=43.2083;VDB=0.0702848;EFF=INTRON(MODIFIER||||546|LOC_Os03g19920|protein_coding|CODING|LOC_Os03g19920.1|8|1) FN2327.SNP.3:11203755 chr03:011203755 0 W/11203755-11203755 FN2327 SNP A -> G AC=1;AN=192;BQB=0.897326;DP=5078;DP4=2582,2045,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.28666e-09;MQSB=0.911246;RPB=0.946366;SGB=16.7409;VDB=0.840679;EFF=INTRON(MODIFIER||||546|LOC_Os03g19920|protein_coding|CODING|LOC_Os03g19920.1|3|1) FN3472-S.SNP.3:11206034 chr03:011206034 0 W/11206034-11206034 FN3472-S SNP A -> G AC=2;AN=184;BQB=0.976587;DP=2583;DP4=1226,1209,18,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16058e-19;MQSB=0.870487;RPB=0.815136;SGB=157.265;VDB=0.203838;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.3:11222118 chr03:011222118 0 W/11222118-11222118 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. W721-2-1.SNP.3:11224011 chr03:011224011 0 W/11224011-11224011 W721-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN596-S.SNP.3:11224141 chr03:011224141 0 W/11224141-11224141 FN596-S Single Base Substitution T-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN-298.SNP.3:11233292 chr03:011233292 0 W/11233292-11233292 FN-298 Single Base Substitution G-T INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2284.SNP.3:11234114 chr03:011234114 0 W/11234114-11234114 FN2284 SNP A -> T AC=1;AN=192;BQB=0.0815318;DP=5000;DP4=2511,2284,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.69756e-11;MQSB=0.906468;RPB=0.965498;SGB=36.607;VDB=0.592254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.3:11238607 chr03:011238607 0 W/11238607-11238607 FN2432 SNP C -> T AC=1;AN=200;BQB=0.721746;DP=4575;DP4=1898,2350,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218579;MQB=2.292e-07;MQSB=0.932232;RPB=0.991343;SGB=-16.1361;VDB=0.80974;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I139|722|LOC_Os03g19960|protein_coding|CODING|LOC_Os03g19960.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I139|564|LOC_Os03g19960|protein_coding|CODING|LOC_Os03g19960.2|2|1) FN3678-S.SNP.3:11241416 chr03:011241416 0 W/11241416-11241416 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.457769;DP=2958;DP4=1411,1412,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05247e-09;MQSB=0.980694;RPB=0.358276;SGB=44.0907;VDB=0.182532;EFF=UTR_3_PRIME(MODIFIER||1388||564|LOC_Os03g19960|protein_coding|CODING|LOC_Os03g19960.2|6|1),UTR_3_PRIME(MODIFIER||290||722|LOC_Os03g19960|protein_coding|CODING|LOC_Os03g19960.1|7|1) FN530-S.SNP.3:11245927 chr03:011245927 0 W/11245927-11245927 FN530-S Single Base Substitution T-C INTRON HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3678-S.SNP.3:11256433 chr03:011256433 0 W/11256433-11256433 FN3678-S SNP A -> T AC=1;AN=190;BQB=0.968952;DP=2314;DP4=1013,1221,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0998271;MQB=0.964412;MQSB=0;RPB=0.997378;SGB=21.8853;VDB=0.525142;EFF=INTRON(MODIFIER||||648|LOC_Os03g19980|protein_coding|CODING|LOC_Os03g19980.2|2|1) FN2109-S.SNP.3:11264511 chr03:011264511 0 W/11264511-11264511 FN2109-S SNP C -> A AC=1;AN=168;BQB=0.385772;DP=3943;DP4=1901,1991,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.33846e-09;MQSB=0.989288;RPB=0.958755;SGB=-72.7757;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.3:11279323 chr03:011279323 0 W/11279323-11279323 FN1623-S Single Base Substitution C-T INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN403-S.SNP.3:11279744 chr03:011279744 0 W/11279744-11279744 FN403-S Single Base Substitution C-T INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2612-S.SNP.3:11283919 chr03:011283919 0 W/11283919-11283919 FN2612-S SNP A -> T AC=2;AN=198;BQB=0.911633;DP=4223;DP4=1800,2098,38,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.26122e-38;MQSB=0.967221;RPB=0.750182;SGB=238.135;VDB=0.0187634;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R531|628|LOC_Os03g20020|protein_coding|CODING|LOC_Os03g20020.1|6|1) FN2210-S.SNP.3:11286980 chr03:011286980 0 W/11286980-11286980 FN2210-S SNP T -> C AC=1;AN=190;BQB=0.80951;DP=4863;DP4=2063,2462,6,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205634;MQB=9.51509e-10;MQSB=0.978525;RPB=0.63347;SGB=-38.5551;VDB=0.10087;EFF=INTRON(MODIFIER||||628|LOC_Os03g20020|protein_coding|CODING|LOC_Os03g20020.1|1|1) FN2791-S.SNP.3:11294652 chr03:011294652 0 W/11294652-11294652 FN2791-S SNP T -> G AC=1;AN=198;BQB=0.709085;DP=4015;DP4=1835,1900,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13469e-09;MQSB=0.983643;RPB=0.973977;SGB=43.7442;VDB=0.152765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.3:11315867 chr03:011315867 0 W/11315867-11315867 FN2417 SNP G -> A AC=1;AN=200;BQB=0.971777;DP=4212;DP4=1800,2143,1,14;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0816714;MQB=0.244978;MQSB=0;RPB=0.0672932;SGB=43.8747;VDB=0.840371;EFF=START_GAINED(LOW||||1241|LOC_Os03g20080|protein_coding|CODING|LOC_Os03g20080.1|1|1),UTR_5_PRIME(MODIFIER||16||1241|LOC_Os03g20080|protein_coding|CODING|LOC_Os03g20080.1|1|1) FN662-S.SNP.3:11325068 chr03:011325068 0 W/11325068-11325068 FN662-S Single Base Substitution T-C INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN3991-S.SNP.3:11328407 chr03:011328407 0 W/11328407-11328407 FN3991-S SNP T -> C AC=1;AN=168;BQB=0.909863;DP=2558;DP4=1222,1175,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.81977e-05;MQSB=0.885183;RPB=0.973276;SGB=12.4615;VDB=0.668533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.3:11329453 chr03:011329453 0 W/11329453-11329453 FN1452-S Single Base Substitution T-C INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN453-S.SNP.3:11336385 chr03:011336385 0 W/11336385-11336385 FN453-S Single Base Substitution G-A INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-199.SNP.3:11346518 chr03:011346518 0 W/11346518-11346518 FN-199 Single Base Substitution T-C INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN677-S.SNP.3:11363550 chr03:011363550 0 W/11363550-11363550 FN677-S Single Base Substitution T-C INTERGENIC HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN2337.SNP.3:11365767 chr03:011365767 0 W/11365767-11365767 FN2337 SNP A -> G AC=1;AN=192;BQB=0.856044;DP=4561;DP4=1993,2176,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021925;MQB=1.36442e-07;MQSB=0.958215;RPB=0.371807;SGB=5.79046;VDB=0.487352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.3:11366671 chr03:011366671 0 W/11366671-11366671 FN3631-S SNP G -> T AC=1;AN=190;BQB=0.855849;DP=2899;DP4=1435,1364,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000767848;MQSB=0.997117;RPB=0.594017;SGB=26.3271;VDB=0.755291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.3:11368991 chr03:011368991 0 W/11368991-11368991 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.912369;DP=4008;DP4=1922,1796,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.23515e-07;MQSB=0.905327;RPB=0.988087;SGB=44.9538;VDB=0.626886;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.3:11385413 chr03:011385413 0 W/11385413-11385413 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.97206;DP=3122;DP4=1163,1429,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000640615;MQB=1.65178e-05;MQSB=0.000514363;RPB=0.278068;SGB=36.1006;VDB=0.517771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P103L|158|LOC_Os03g20150|protein_coding|CODING|LOC_Os03g20150.1|2|1) FN3537-S.SNP.3:11385413 chr03:011385413 0 W/11385413-11385413 FN3537-S SNP C -> T AC=2;AN=188;BQB=0.870855;DP=2958;DP4=1644,1143,19,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000338066;MQB=1.77602e-14;MQSB=0.866245;RPB=0.999392;SGB=117.128;VDB=0.260318;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P103L|158|LOC_Os03g20150|protein_coding|CODING|LOC_Os03g20150.1|2|1) FN3422-S.SNP.3:11387509 chr03:011387509 0 W/11387509-11387509 FN3422-S SNP G -> C AC=1;AN=184;BQB=0.677173;DP=3241;DP4=1561,1592,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11054e-10;MQSB=0.910985;RPB=0.839513;SGB=75.8731;VDB=0.298153;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.3:11390512 chr03:011390512 0 W/11390512-11390512 FN911-S Single Base Substitution C-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN1089-S.SNP.3:11392487 chr03:011392487 0 W/11392487-11392487 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1410-S.SNP.3:11397510 chr03:011397510 0 W/11397510-11397510 FN1410-S Single Base Substitution C-T INTRON HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1117-S.SNP.3:11401594 chr03:011401594 0 W/11401594-11401594 FN1117-S Single Base Substitution G-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2663-S.SNP.3:11406150 chr03:011406150 0 W/11406150-11406150 FN2663-S SNP A -> G AC=1;AN=200;BQB=0.996965;DP=5257;DP4=2397,2611,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.24563e-08;MQSB=0.996711;RPB=0.724189;SGB=33.0593;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y338C|709|LOC_Os03g20180|protein_coding|CODING|LOC_Os03g20180.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y338C|709|LOC_Os03g20180|protein_coding|CODING|LOC_Os03g20180.2|6|1) FN3416-S.SNP.3:11409106 chr03:011409106 0 W/11409106-11409106 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.994952;DP=2812;DP4=1332,1405,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.02237e-08;MQSB=0.980378;RPB=0.943169;SGB=48.7425;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.3:11413443 chr03:011413443 0 W/11413443-11413443 FN4066-S SNP G -> T AC=1;AN=168;BQB=0.955459;DP=2768;DP4=1335,1322,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15952e-05;MQSB=0.891206;RPB=0.995342;SGB=17.5943;VDB=0.657519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R234L|798|LOC_Os03g20190|protein_coding|CODING|LOC_Os03g20190.1|1|1) FN322-S.SNP.3:11417972 chr03:011417972 0 W/11417972-11417972 FN322-S Single Base Substitution G-T INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN838-S.SNP.3:11419083 chr03:011419083 0 W/11419083-11419083 FN838-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os03g20200 transposon protein, putative, Mutator sub-class, expressed SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN1536-S.SNP.3:11420891 chr03:011420891 0 W/11420891-11420891 FN1536-S Single Base Substitution A-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN4105-S.SNP.3:11431085 chr03:011431085 0 W/11431085-11431085 FN4105-S SNP C -> T AC=1;AN=182;BQB=0.991448;DP=3609;DP4=1734,1753,11,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.43945e-10;MQSB=0.946726;RPB=0.707747;SGB=25.655;VDB=0.701944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.3:11434236 chr03:011434236 0 W/11434236-11434236 FN2434 SNP G -> T AC=2;AN=200;BQB=0.635163;DP=4612;DP4=2135,2199,14,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90594e-14;MQSB=0.997324;RPB=0.94232;SGB=45.1159;VDB=0.786922;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.3:11436719 chr03:011436719 0 W/11436719-11436719 FN-136 Single Base Substitution G-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1700-S.SNP.3:11444354 chr03:011444354 0 W/11444354-11444354 FN1700-S SNP C -> T AC=1;AN=188;BQB=0.279021;DP=1541;DP4=826,683,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000327436;MQSB=0.420203;RPB=0.922317;SGB=-3.72151;VDB=0.746049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.3:11445318 chr03:011445318 0 W/11445318-11445318 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.999162;DP=3019;DP4=1596,1325,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29043e-11;MQSB=0.931601;RPB=0.200729;SGB=53.8699;VDB=0.0513285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.3:11447194 chr03:011447194 0 W/11447194-11447194 FN1577-S Single Base Substitution T-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. W423-5-1.SNP.3:11450939 chr03:011450939 0 W/11450939-11450939 W423-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN4075-S.SNP.3:11458794 chr03:011458794 0 W/11458794-11458794 FN4075-S SNP G -> A AC=2;AN=182;BQB=0.954273;DP=2427;DP4=1079,1259,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.06123e-13;MQSB=0.999302;RPB=0.991566;SGB=111.774;VDB=0.678507;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.3:11460747 chr03:011460747 0 W/11460747-11460747 FN975-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2299.SNP.3:11483481 chr03:011483481 0 W/11483481-11483481 FN2299 SNP T -> A AC=1;AN=192;BQB=0.081336;DP=4281;DP4=1780,1602,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=8.87539e-06;MQSB=0.939177;RPB=0.148633;SGB=4.22611;VDB=0.0156051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.3:11486268 chr03:011486268 0 W/11486268-11486268 FN1230-S Single Base Substitution G-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN-93.SNP.3:11490073 chr03:011490073 0 W/11490073-11490073 FN-93 Single Base Substitution A-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN-231.SNP.3:11494658 chr03:011494658 0 W/11494658-11494658 FN-231 Single Base Substitution C-A INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1380-S.SNP.3:11495646 chr03:011495646 0 W/11495646-11495646 FN1380-S Single Base Substitution T-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1413-S.SNP.3:11500954 chr03:011500954 0 W/11500954-11500954 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3957-S.SNP.3:11502902 chr03:011502902 0 W/11502902-11502902 FN3957-S SNP G -> A AC=1;AN=168;BQB=0.873001;DP=2785;DP4=1147,1525,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30235e-05;MQSB=0.99305;RPB=0.977378;SGB=31.3172;VDB=0.615779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.3:11506512 chr03:011506512 0 W/11506512-11506512 FN1292-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2171-S.SNP.3:11506542 chr03:011506542 0 W/11506542-11506542 FN2171-S SNP G -> A AC=1;AN=168;BQB=0.0017877;DP=4167;DP4=2103,2030,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09676e-07;MQSB=0.930605;RPB=0.309303;SGB=-159.481;VDB=0.178731;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.3:11506627 chr03:011506627 0 W/11506627-11506627 FN999-S Single Base Substitution T-C INTERGENIC HOMO SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-356.SNP.3:11529530 chr03:011529530 0 W/11529530-11529530 FN-356 Single Base Substitution G-T INTRON HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1606-S.SNP.3:11531601 chr03:011531601 0 W/11531601-11531601 FN1606-S Single Base Substitution G-A INTRON Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN974-S.SNP.3:11531771 chr03:011531771 0 W/11531771-11531771 FN974-S Single Base Substitution A-C INTRON HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN-70.SNP.3:11534106 chr03:011534106 0 W/11534106-11534106 FN-70 Single Base Substitution T-A INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN-70.SNP.3:11534114 chr03:011534114 0 W/11534114-11534114 FN-70 Single Base Substitution T-C INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2097-S.SNP.3:11534744 chr03:011534744 0 W/11534744-11534744 FN2097-S SNP G -> A AC=2;AN=168;BQB=0.979074;DP=1983;DP4=1291,614,24,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.98324e-17;MQSB=0.685511;RPB=0.982816;SGB=-8.47945;VDB=0.75668;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.3:11535559 chr03:011535559 0 W/11535559-11535559 FN943-S Single Base Substitution C-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1643-S.SNP.3:11535767 chr03:011535767 0 W/11535767-11535767 FN1643-S Single Base Substitution T-A INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2676-S.SNP.3:11536130 chr03:011536130 0 W/11536130-11536130 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.286684;DP=4300;DP4=1986,2042,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.57654e-08;MQSB=0.940749;RPB=0.974032;SGB=33.0593;VDB=0.731645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.3:11543745 chr03:011543745 0 W/11543745-11543745 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.829141;DP=4316;DP4=2074,2046,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.09696e-08;MQSB=0.947723;RPB=0.240843;SGB=9.3494;VDB=0.210319;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.3:11544058 chr03:011544058 0 W/11544058-11544058 FN4182-S SNP T -> A AC=1;AN=170;BQB=0.958564;DP=2599;DP4=1300,1232,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.90192e-09;MQSB=0.943816;RPB=0.911762;SGB=56.7575;VDB=0.297415;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.3:11545260 chr03:011545260 0 W/11545260-11545260 FN806-S Single Base Substitution A-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN867-S.SNP.3:11545864 chr03:011545864 0 W/11545864-11545864 FN867-S Single Base Substitution A-T INTERGENIC HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2149-S.SNP.3:11546084 chr03:011546084 0 W/11546084-11546084 FN2149-S SNP A -> C AC=1;AN=168;BQB=0.0437568;DP=4548;DP4=2006,2505,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00570133;MQSB=0.915854;RPB=0.174216;SGB=5.62151;VDB=0.0513245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.3:11555474 chr03:011555474 0 W/11555474-11555474 FN2452 SNP A -> G AC=1;AN=200;BQB=0.874757;DP=4855;DP4=2221,2342,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.56073e-05;MQSB=0.962923;RPB=0.144075;SGB=13.8539;VDB=0.826644;EFF=INTRON(MODIFIER||||675|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.1|4|1),INTRON(MODIFIER||||517|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.2|4|1),INTRON(MODIFIER||||517|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.3|4|1) FN3695-S.SNP.3:11557655 chr03:011557655 0 W/11557655-11557655 FN3695-S SNP C -> A AC=2;AN=190;BQB=0.999733;DP=2974;DP4=1326,1509,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48847e-13;MQSB=0.990911;RPB=0.565014;SGB=108.296;VDB=0.349404;EFF=INTRON(MODIFIER||||675|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.1|1|1),INTRON(MODIFIER||||517|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.2|1|1),INTRON(MODIFIER||||517|LOC_Os03g20420|protein_coding|CODING|LOC_Os03g20420.3|1|1) FN1421-S.SNP.3:11560228 chr03:011560228 0 W/11560228-11560228 FN1421-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN-52.SNP.3:11561829 chr03:011561829 0 W/11561829-11561829 FN-52 Single Base Substitution C-T STOP_GAINED HET LOC_Os03g20430 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8, putative, expressed SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN3852-S.SNP.3:11562418 chr03:011562418 0 W/11562418-11562418 FN3852-S SNP C -> A AC=1;AN=158;BQB=0.987355;DP=2218;DP4=1034,1090,3,3;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0112714;MQB=0.00286506;MQSB=0.45343;RPB=0.311707;SGB=20.8534;VDB=0.252876;EFF=UTR_3_PRIME(MODIFIER||326||534|LOC_Os03g20430|protein_coding|CODING|LOC_Os03g20430.1|2|1) FN4221-S.SNP.3:11562888 chr03:011562888 0 W/11562888-11562888 FN4221-S SNP C -> A AC=1;AN=170;BQB=0.370297;DP=2223;DP4=1135,1016,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00989654;MQB=0.0260681;MQSB=0.107205;RPB=0.630795;SGB=12.556;VDB=0.914019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.3:11576569 chr03:011576569 0 W/11576569-11576569 FN3776-S SNP T -> C AC=2;AN=190;BQB=0.91003;DP=2633;DP4=1277,1217,8,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.90146e-14;MQSB=0.949283;RPB=0.940614;SGB=99.1879;VDB=0.809308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.3:11585030 chr03:011585030 0 W/11585030-11585030 FN3285-S SNP C -> T AC=2;AN=184;BQB=0.55828;DP=3182;DP4=1568,1494,14,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.51562e-11;MQSB=0.813854;RPB=0.0289024;SGB=56.0583;VDB=0.0472161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.3:11591275 chr03:011591275 0 W/11591275-11591275 FN3944-S SNP A -> G AC=1;AN=168;BQB=0.640004;DP=2716;DP4=1268,1307,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.9572e-08;MQSB=0.99966;RPB=0.362224;SGB=55.3328;VDB=0.763361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.3:11591995 chr03:011591995 0 W/11591995-11591995 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2261-S.SNP.3:11592898 chr03:011592898 0 W/11592898-11592898 FN2261-S SNP A -> C AC=2;AN=190;BQB=0.829943;DP=4959;DP4=2452,2174,56,41;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4013e-45;MQSB=0.0973648;RPB=0.498684;SGB=377.586;VDB=0.373841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.3:11599242 chr03:011599242 0 W/11599242-11599242 FN4126-S SNP G -> A AC=2;AN=182;BQB=0.999997;DP=2779;DP4=1379,1296,6,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.79033e-08;MQSB=0.990871;RPB=0.947506;SGB=57.644;VDB=0.935722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.3:11603252 chr03:011603252 0 W/11603252-11603252 FN1550-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN3794-S.SNP.3:11624575 chr03:011624575 0 W/11624575-11624575 FN3794-S SNP T -> A AC=2;AN=190;BQB=0.854624;DP=2531;DP4=1259,1200,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.34674e-13;MQSB=0.947221;RPB=0.958908;SGB=99.1879;VDB=0.585918;EFF=INTRON(MODIFIER||||387|LOC_Os03g20520|protein_coding|CODING|LOC_Os03g20520.1|5|1) FN1615-S.SNP.3:11628430 chr03:011628430 0 W/11628430-11628430 FN1615-S Single Base Substitution A-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3693-S.SNP.3:11628443 chr03:011628443 0 W/11628443-11628443 FN3693-S SNP A -> G AC=1;AN=190;BQB=0.924702;DP=2983;DP4=1384,1484,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.69874e-05;MQSB=0.983364;RPB=0.676557;SGB=21.8853;VDB=0.168864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.3:11629731 chr03:011629731 0 W/11629731-11629731 FN3733-S SNP T -> G AC=2;AN=190;BQB=0.879576;DP=3204;DP4=1516,1536,12,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.82823e-20;MQSB=0.995837;RPB=0.843489;SGB=74.7373;VDB=0.338482;EFF=UTR_3_PRIME(MODIFIER||46||843|LOC_Os03g20530|protein_coding|CODING|LOC_Os03g20530.1|6|1) FN2212-S.SNP.3:11642799 chr03:011642799 0 W/11642799-11642799 FN2212-S SNP T -> G AC=1;AN=190;BQB=0.83772;DP=4918;DP4=2317,2169,27,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41309e-22;MQSB=0.80185;RPB=0.40011;SGB=97.7221;VDB=0.439506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.3:11651335 chr03:011651335 0 W/11651335-11651335 FN2440 SNP C -> T AC=2;AN=200;BQB=0.488795;DP=4537;DP4=2145,2045,47,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.70836e-43;MQSB=0.576186;RPB=0.999967;SGB=264.418;VDB=0.678066;EFF=UTR_5_PRIME(MODIFIER||207||147|LOC_Os03g20550|protein_coding|CODING|LOC_Os03g20550.3|2|1),INTRON(MODIFIER||||210|LOC_Os03g20550|protein_coding|CODING|LOC_Os03g20550.1|2|1),INTRON(MODIFIER||||200|LOC_Os03g20550|protein_coding|CODING|LOC_Os03g20550.2|1|1) FN2659-S.SNP.3:11658533 chr03:011658533 0 W/11658533-11658533 FN2659-S SNP A -> T AC=1;AN=200;BQB=0.942178;DP=5191;DP4=2641,2339,9,4;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00404546;MQB=0.000979197;MQSB=7.0326e-28;RPB=0.768586;SGB=19.0642;VDB=0.651359;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.3:11667840 chr03:011667840 0 W/11667840-11667840 FN1179-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g20600 expressed protein SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2324.SNP.3:11668342 chr03:011668342 0 W/11668342-11668342 FN2324 SNP G -> A AC=1;AN=192;BQB=0.629727;DP=4741;DP4=2155,2320,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.61068e-09;MQSB=0.972538;RPB=0.882416;SGB=46.9087;VDB=0.562095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.3:11675304 chr03:011675304 0 W/11675304-11675304 FN2729-S SNP A -> C AC=2;AN=200;BQB=0.756759;DP=4913;DP4=2459,2138,25,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.29099e-25;MQSB=0.983281;RPB=0.93504;SGB=52.8295;VDB=0.462844;EFF=INTRON(MODIFIER||||129|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.2|2|1),INTRON(MODIFIER||||71|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.3|2|1),INTRON(MODIFIER||||156|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.1|4|1) FN2729-S.SNP.3:11675305 chr03:011675305 0 W/11675305-11675305 FN2729-S SNP C -> A AC=2;AN=200;BQB=0.999754;DP=4915;DP4=2499,2154,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.61825e-27;MQSB=0.970811;RPB=0.925029;SGB=99.8245;VDB=0.669733;EFF=INTRON(MODIFIER||||129|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.2|2|1),INTRON(MODIFIER||||71|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.3|2|1),INTRON(MODIFIER||||156|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.1|4|1) FN2673-S.SNP.3:11677125 chr03:011677125 0 W/11677125-11677125 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.705358;DP=4859;DP4=2519,2092,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.1155e-12;MQSB=0.991904;RPB=0.118011;SGB=86.5007;VDB=0.404126;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y139|156|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y112|129|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.2|5|1),INTRON(MODIFIER||||71|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.3|3|1) FN4107-S.SNP.3:11677454 chr03:011677454 0 W/11677454-11677454 FN4107-S SNP G -> T AC=1;AN=182;BQB=0.899943;DP=3171;DP4=1479,1638,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.67378e-06;MQSB=0.990765;RPB=0.993904;SGB=35.0899;VDB=0.903181;EFF=UTR_3_PRIME(MODIFIER||292||71|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.3|4|1),UTR_3_PRIME(MODIFIER||275||156|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.1|7|1),UTR_3_PRIME(MODIFIER||275||129|LOC_Os03g20630|protein_coding|CODING|LOC_Os03g20630.2|5|1) FN1455-S.SNP.3:11685279 chr03:011685279 0 W/11685279-11685279 FN1455-S Single Base Substitution G-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN421-S.SNP.3:11688825 chr03:011688825 0 W/11688825-11688825 FN421-S Single Base Substitution C-T INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN421-S.SNP.3:11688826 chr03:011688826 0 W/11688826-11688826 FN421-S Single Base Substitution A-T INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2312.SNP.3:11698233 chr03:011698233 0 W/11698233-11698233 FN2312 SNP G -> A AC=2;AN=192;BQB=0.738706;DP=5295;DP4=2658,2260,20,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.15081e-30;MQSB=0.997416;RPB=0.0447177;SGB=5.54786;VDB=0.499539;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.3:11698234 chr03:011698234 0 W/11698234-11698234 FN2312 SNP G -> A AC=2;AN=192;BQB=0.569086;DP=5281;DP4=2664,2275,20,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.82371e-30;MQSB=0.995947;RPB=0.0800131;SGB=4.41917;VDB=0.566278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.3:11703825 chr03:011703825 0 W/11703825-11703825 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.995408;DP=4273;DP4=1980,2100,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0491458;MQB=0.823204;MQSB=0;RPB=0.984189;SGB=24.1541;VDB=0.194938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V999M|1061|LOC_Os03g20690|protein_coding|CODING|LOC_Os03g20690.1|7|1) FN3838-S.SNP.3:11706481 chr03:011706481 0 W/11706481-11706481 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.964543;DP=3006;DP4=1607,1308,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000332668;MQB=0.00375181;MQSB=0.368275;RPB=0.72213;SGB=35.4339;VDB=0.399478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G349V|1061|LOC_Os03g20690|protein_coding|CODING|LOC_Os03g20690.1|4|1) FN2444.SNP.3:11707186 chr03:011707186 0 W/11707186-11707186 FN2444 SNP T -> A AC=2;AN=200;BQB=0.958592;DP=4760;DP4=2177,2249,26,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.15619e-26;MQSB=0.464632;RPB=0.996524;SGB=64.0657;VDB=0.0825421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K128I|1061|LOC_Os03g20690|protein_coding|CODING|LOC_Os03g20690.1|3|1) FN3630-S.SNP.3:11709926 chr03:011709926 0 W/11709926-11709926 FN3630-S SNP G -> T AC=1;AN=190;BQB=0.935323;DP=2277;DP4=1452,737,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000124862;MQSB=0.267118;RPB=0.735975;SGB=26.3271;VDB=0.467796;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.3:11716420 chr03:011716420 0 W/11716420-11716420 FN4133-S SNP C -> G AC=2;AN=182;BQB=0.965659;DP=3051;DP4=1439,1545,14,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.85139e-18;MQSB=0.843826;RPB=0.55256;SGB=125.307;VDB=0.0794143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q1022E|1387|LOC_Os03g20700|protein_coding|CODING|LOC_Os03g20700.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q1022E|1387|LOC_Os03g20700|protein_coding|CODING|LOC_Os03g20700.2|3|1) W23-2-1.SNP.3:11725200 chr03:011725200 0 W/11725200-11725200 W23-2-1 Single Base Substitution C-T UTR_5_PRIME HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN3523-S.SNP.3:11736758 chr03:011736758 0 W/11736758-11736758 FN3523-S SNP C -> T AC=1;AN=188;BQB=0.937635;DP=2607;DP4=1428,1126,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.52692e-07;MQSB=0.999832;RPB=0.804191;SGB=39.8925;VDB=0.953851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.3:11743012 chr03:011743012 0 W/11743012-11743012 FN1528-S Single Base Substitution C-T INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2191-S.SNP.3:11756185 chr03:011756185 0 W/11756185-11756185 FN2191-S SNP G -> A AC=2;AN=190;BQB=0.579351;DP=4621;DP4=1885,2243,22,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.11387e-20;MQSB=0.446097;RPB=0.981954;SGB=46.0658;VDB=0.562957;EFF=INTRON(MODIFIER||||205|LOC_Os03g20770|protein_coding|CODING|LOC_Os03g20770.1|1|1) FN2107-S.SNP.3:11757155 chr03:011757155 0 W/11757155-11757155 FN2107-S SNP G -> A AC=2;AN=168;BQB=0.875255;DP=3235;DP4=1828,1335,28,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.43395e-24;MQSB=0.991088;RPB=0.204136;SGB=-3.30965;VDB=0.339364;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.3:11758167 chr03:011758167 0 W/11758167-11758167 FN351-S Single Base Substitution A-T INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.3:11758168 chr03:011758168 0 W/11758168-11758168 FN351-S Single Base Substitution C-T INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1129-S.SNP.3:11759407 chr03:011759407 0 W/11759407-11759407 FN1129-S Single Base Substitution A-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1396-S.SNP.3:11759595 chr03:011759595 0 W/11759595-11759595 FN1396-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2689-S.SNP.3:11760356 chr03:011760356 0 W/11760356-11760356 FN2689-S SNP A -> C AC=1;AN=200;BQB=0.936579;DP=5258;DP4=2656,2377,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.90961e-15;MQSB=0.984033;RPB=0.945715;SGB=104.921;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.3:11761126 chr03:011761126 0 W/11761126-11761126 FN687-S Single Base Substitution T-G INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1673-S.SNP.3:11767528 chr03:011767528 0 W/11767528-11767528 FN1673-S SNP T -> C AC=2;AN=188;BQB=0.0285958;DP=4236;DP4=2167,2006,25,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.28804e-21;MQSB=0.981484;RPB=0.511696;SGB=50.2938;VDB=0.0148402;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.3:11778809 chr03:011778809 0 W/11778809-11778809 FN3814-S SNP G -> A AC=2;AN=190;BQB=0.501698;DP=2943;DP4=1534,1324,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.03365e-10;MQSB=0.935671;RPB=0.752298;SGB=85.5263;VDB=0.670684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.3:11782205 chr03:011782205 0 W/11782205-11782205 FN3830-S SNP G -> C AC=1;AN=190;BQB=0.765176;DP=2801;DP4=1218,1494,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41953e-10;MQSB=0.999913;RPB=0.957332;SGB=94.6341;VDB=0.766838;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.3:11797138 chr03:011797138 0 W/11797138-11797138 FN_N1-130-1 Single Base Substitution G-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN343-S.SNP.3:11798386 chr03:011798386 0 W/11798386-11798386 FN343-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g20840 disease resistance RPP13-like protein 1, putative, expressed SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2638-S.SNP.3:11803817 chr03:011803817 0 W/11803817-11803817 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.909722;DP=5056;DP4=2370,2396,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71871e-16;MQSB=0.518955;RPB=0.948051;SGB=55.5366;VDB=0.580121;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.3:11817977 chr03:011817977 0 W/11817977-11817977 FN1412-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3667-S.SNP.3:11830220 chr03:011830220 0 W/11830220-11830220 FN3667-S SNP T -> G AC=1;AN=190;BQB=0.923737;DP=2200;DP4=893,1014,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.03474e-08;MQSB=0.9271;RPB=0.237121;SGB=5.66499;VDB=0.627846;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.3:11843735 chr03:011843735 0 W/11843735-11843735 FN-264 Single Base Substitution T-C INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN1108-S.SNP.3:11847648 chr03:011847648 0 W/11847648-11847648 FN1108-S Single Base Substitution T-C INTRON HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2166-S.SNP.3:11854228 chr03:011854228 0 W/11854228-11854228 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.0235057;DP=3898;DP4=2172,1668,18,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9581e-09;MQSB=0.989301;RPB=0.731798;SGB=-196.035;VDB=0.0706435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.3:11857040 chr03:011857040 0 W/11857040-11857040 FN1232-S Single Base Substitution A-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN4080-S.SNP.3:11860141 chr03:011860141 0 W/11860141-11860141 FN4080-S SNP T -> C AC=1;AN=182;BQB=0.985488;DP=2968;DP4=1316,1566,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.47783e-06;MQSB=0.996253;RPB=0.687586;SGB=35.0899;VDB=0.249799;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.3:11862394 chr03:011862394 0 W/11862394-11862394 FN-122 Single Base Substitution G-A INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3518-S.SNP.3:11867678 chr03:011867678 0 W/11867678-11867678 FN3518-S SNP C -> T AC=2;AN=188;BQB=0.656702;DP=2832;DP4=1987,460,17,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.4677e-13;MQSB=0.00704587;RPB=0.984646;SGB=89.8686;VDB=0.310261;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.3:11868403 chr03:011868403 0 W/11868403-11868403 FN428-S Single Base Substitution A-G INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN4077-S.SNP.3:11869700 chr03:011869700 0 W/11869700-11869700 FN4077-S SNP T -> C AC=1;AN=182;BQB=0.516142;DP=3008;DP4=1602,1284,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.09889e-05;MQSB=0.988563;RPB=0.974767;SGB=13.1007;VDB=0.136643;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L63|256|LOC_Os03g20920|protein_coding|CODING|LOC_Os03g20920.1|1|1) FN1666-S.SNP.3:11876441 chr03:011876441 0 W/11876441-11876441 FN1666-S SNP A -> T AC=1;AN=188;BQB=0.183311;DP=3845;DP4=1622,2196,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.24022e-07;MQSB=0.970457;RPB=0.703986;SGB=-14.9998;VDB=0.836076;EFF=INTRON(MODIFIER||||1057|LOC_Os03g20930|protein_coding|CODING|LOC_Os03g20930.1|1|1) W453-3-1.SNP.3:11879457 chr03:011879457 0 W/11879457-11879457 W453-3-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g20940 stress responsive protein, putative, expressed SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN1441-S.SNP.3:11882018 chr03:011882018 0 W/11882018-11882018 FN1441-S Single Base Substitution G-T INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3524-S.SNP.3:11884541 chr03:011884541 0 W/11884541-11884541 FN3524-S SNP T -> C AC=1;AN=188;BQB=0.964654;DP=2672;DP4=1171,1303,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93609e-07;MQSB=0.999992;RPB=0.142344;SGB=44.4357;VDB=0.778936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y987C|1124|LOC_Os03g20949|protein_coding|CODING|LOC_Os03g20949.1|6|1) FN2606-S.SNP.3:11886165 chr03:011886165 0 W/11886165-11886165 FN2606-S SNP C -> A AC=1;AN=198;BQB=0.654325;DP=4378;DP4=2150,1999,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.47948e-09;MQSB=0.602848;RPB=0.797402;SGB=58.7391;VDB=0.695;EFF=INTRON(MODIFIER||||1124|LOC_Os03g20949|protein_coding|CODING|LOC_Os03g20949.1|2|1) FN2215-S.SNP.3:11889277 chr03:011889277 0 W/11889277-11889277 FN2215-S SNP A -> G AC=1;AN=190;BQB=0.383477;DP=3272;DP4=1141,1808,10,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000305623;MQB=2.66825e-13;MQSB=0.74657;RPB=0.970607;SGB=25.8654;VDB=0.370758;EFF=INTERGENIC(MODIFIER||||||||||1) FN-42.SNP.3:11894500 chr03:011894500 0 W/11894500-11894500 FN-42 Single Base Substitution G-T UTR_3_PRIME Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN618-S.SNP.3:11897386 chr03:011897386 0 W/11897386-11897386 FN618-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g20970 phospholipid-transporting ATPase 1, putative, expressed SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1686-S.SNP.3:11897644 chr03:011897644 0 W/11897644-11897644 FN1686-S SNP T -> C AC=1;AN=188;BQB=0.258189;DP=1430;DP4=589,735,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000381329;MQSB=0.972441;RPB=0.760833;SGB=13.3597;VDB=0.999431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E94G|664|LOC_Os03g20970|protein_coding|CODING|LOC_Os03g20970.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E94G|715|LOC_Os03g20970|protein_coding|CODING|LOC_Os03g20970.1|1|1) FN414-S.SNP.3:11903888 chr03:011903888 0 W/11903888-11903888 FN414-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g20980 zinc finger, C3HC4 type domain containing protein, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN410-S.SNP.3:11906669 chr03:011906669 0 W/11906669-11906669 FN410-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN4039-S.SNP.3:11910581 chr03:011910581 0 W/11910581-11910581 FN4039-S SNP C -> T AC=1;AN=168;BQB=0.922083;DP=2459;DP4=1103,1231,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.04788e-13;MQSB=0.886622;RPB=0.0801235;SGB=87.6193;VDB=0.330079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.3:11911917 chr03:011911917 0 W/11911917-11911917 FN1200-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1200-S.SNP.3:11911918 chr03:011911918 0 W/11911918-11911918 FN1200-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN711-S.SNP.3:11912972 chr03:011912972 0 W/11912972-11912972 FN711-S Single Base Substitution C-T INTERGENIC HOMO SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN1660-S.SNP.3:11914889 chr03:011914889 0 W/11914889-11914889 FN1660-S Single Base Substitution G-A INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3323-S.SNP.3:11926612 chr03:011926612 0 W/11926612-11926612 FN3323-S SNP C -> A AC=2;AN=184;BQB=0.855452;DP=2842;DP4=1371,1376,4,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23145e-08;MQSB=0.87645;RPB=0.848024;SGB=6.80232;VDB=0.885859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V389F|467|LOC_Os03g21020|protein_coding|CODING|LOC_Os03g21020.1|8|1) FN3790-S.SNP.3:11930189 chr03:011930189 0 W/11930189-11930189 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.963365;DP=3023;DP4=1539,1370,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.92978e-11;MQSB=0.846013;RPB=0.780999;SGB=33.8752;VDB=0.467038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.3:11933649 chr03:011933649 0 W/11933649-11933649 FN3792-S SNP G -> A AC=1;AN=190;BQB=0.964479;DP=3139;DP4=1499,1511,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07995e-09;MQSB=0.991875;RPB=0.924608;SGB=62.7569;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.3:11933751 chr03:011933751 0 W/11933751-11933751 FN865-S Single Base Substitution G-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN-281.SNP.3:11933779 chr03:011933779 0 W/11933779-11933779 FN-281 Single Base Substitution G-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2735-S.SNP.3:11934805 chr03:011934805 0 W/11934805-11934805 FN2735-S SNP G -> C AC=2;AN=200;BQB=0.440308;DP=4897;DP4=1959,2659,25,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.30267e-29;MQSB=0.986015;RPB=0.779191;SGB=220.051;VDB=0.500032;EFF=INTERGENIC(MODIFIER||||||||||1) FN696-S.SNP.3:11940482 chr03:011940482 0 W/11940482-11940482 FN696-S Single Base Substitution C-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3090-S.SNP.3:11945542 chr03:011945542 0 W/11945542-11945542 FN3090-S SNP C -> G AC=2;AN=184;BQB=0.919085;DP=2947;DP4=995,1852,8,25;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=9.51338e-16;MQSB=0.228719;RPB=0.997471;SGB=106.184;VDB=0.0396052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.3:11950566 chr03:011950566 0 W/11950566-11950566 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.905974;DP=4743;DP4=2429,2044,21,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25565e-14;MQSB=0.325757;RPB=0.196704;SGB=104.921;VDB=0.748228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.3:11957752 chr03:011957752 0 W/11957752-11957752 FN3532-S SNP T -> C AC=1;AN=188;BQB=0.991207;DP=2728;DP4=1364,1254,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67458e-10;MQSB=0.999387;RPB=0.538947;SGB=60.7873;VDB=0.82549;EFF=UTR_3_PRIME(MODIFIER||226||348|LOC_Os03g21040|protein_coding|CODING|LOC_Os03g21040.2|4|1) FN1656-S.SNP.3:11963307 chr03:011963307 0 W/11963307-11963307 FN1656-S Single Base Substitution G-A INTRON Homo SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1656-S.SNP.3:11963308 chr03:011963308 0 W/11963308-11963308 FN1656-S Single Base Substitution T-A INTRON Homo SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2452.SNP.3:11966523 chr03:011966523 0 W/11966523-11966523 FN2452 SNP T -> C AC=1;AN=200;BQB=0.0203851;DP=4653;DP4=1875,2354,13,4;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00515796;MQB=0.0577323;MQSB=0.0506449;RPB=0.928569;SGB=-100.116;VDB=0.0202086;EFF=INTRON(MODIFIER||||1040|LOC_Os03g21050|protein_coding|CODING|LOC_Os03g21050.1|6|1) FN1297-S.SNP.3:11970420 chr03:011970420 0 W/11970420-11970420 FN1297-S Single Base Substitution T-C INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-48.SNP.3:11970613 chr03:011970613 0 W/11970613-11970613 FN-48 Single Base Substitution T-C INTERGENIC Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. W7-1-1.SNP.3:11981142 chr03:011981142 0 W/11981142-11981142 W7-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2275-S.SNP.3:11982782 chr03:011982782 0 W/11982782-11982782 FN2275-S SNP A -> G AC=1;AN=190;BQB=0.908571;DP=4289;DP4=1677,2234,21,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.2218e-23;MQSB=0.629647;RPB=0.615012;SGB=1.17882;VDB=0.386616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.3:11983391 chr03:011983391 0 W/11983391-11983391 FN1030-S Single Base Substitution G-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN1442-S.SNP.3:11986910 chr03:011986910 0 W/11986910-11986910 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN982-S.SNP.3:11987576 chr03:011987576 0 W/11987576-11987576 FN982-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g21070 expressed protein SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN-396.SNP.3:11988939 chr03:011988939 0 W/11988939-11988939 FN-396 Single Base Substitution G-A INTERGENIC HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN1693-S.SNP.3:11988939 chr03:011988939 0 W/11988939-11988939 FN1693-S SNP G -> A AC=2;AN=188;BQB=0.0154498;DP=2826;DP4=1220,1550,15,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48451e-10;MQSB=0.957008;RPB=0.920305;SGB=-202.367;VDB=0.398499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.3:11988939 chr03:011988939 0 W/11988939-11988939 FN2485 SNP G -> A AC=2;AN=200;BQB=0.911149;DP=5202;DP4=2748,2048,29,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01435e-25;MQSB=0.986941;RPB=0.778601;SGB=159.24;VDB=0.600803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.3:11988939 chr03:011988939 0 W/11988939-11988939 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.949031;DP=2910;DP4=1619,1194,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30518e-07;MQSB=0.965492;RPB=0.621692;SGB=32.2261;VDB=0.454942;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.3:11988939 chr03:011988939 0 W/11988939-11988939 FN378-S Single Base Substitution G-A INTERGENIC HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN417-S.SNP.3:11996597 chr03:011996597 0 W/11996597-11996597 FN417-S Single Base Substitution T-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2667-S.SNP.3:11999278 chr03:011999278 0 W/11999278-11999278 FN2667-S SNP T -> G AC=1;AN=200;BQB=0.962954;DP=4735;DP4=2334,2208,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86044e-17;MQSB=0.998921;RPB=0.622247;SGB=94.3471;VDB=0.846453;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.3:12000236 chr03:012000236 0 W/12000236-12000236 FN2685-S SNP C -> A AC=1;AN=200;BQB=0.773387;DP=5009;DP4=2520,2222,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84782e-10;MQSB=0.934865;RPB=0.97006;SGB=47.4799;VDB=0.976878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.3:12000961 chr03:012000961 0 W/12000961-12000961 FN1018-S Single Base Substitution C-T INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1103-S.SNP.3:12000961 chr03:012000961 0 W/12000961-12000961 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3868-S.SNP.3:12002906 chr03:012002906 0 W/12002906-12002906 FN3868-S SNP A -> G AC=2;AN=158;BQB=0.744274;DP=2424;DP4=1248,1093,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.58148e-09;MQSB=0.955986;RPB=0.989009;SGB=50.9207;VDB=0.85243;EFF=INTRON(MODIFIER||||966|LOC_Os03g21080|protein_coding|CODING|LOC_Os03g21080.1|5|1) FN2125-S.SNP.3:12004686 chr03:012004686 0 W/12004686-12004686 FN2125-S SNP A -> T AC=1;AN=168;BQB=0.427518;DP=3729;DP4=1972,1721,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17412e-09;MQSB=0.958942;RPB=0.426407;SGB=-13.6493;VDB=0.286631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N218I|966|LOC_Os03g21080|protein_coding|CODING|LOC_Os03g21080.1|7|1) FN864-S.SNP.3:12020222 chr03:012020222 0 W/12020222-12020222 FN864-S Single Base Substitution C-T INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN-281.SNP.3:12020620 chr03:012020620 0 W/12020620-12020620 FN-281 Single Base Substitution G-A INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2102-S.SNP.3:12021924 chr03:012021924 0 W/12021924-12021924 FN2102-S SNP C -> T AC=1;AN=168;BQB=0.747919;DP=3835;DP4=1860,1939,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.30569e-10;MQSB=0.923746;RPB=0.28972;SGB=-39.5049;VDB=0.827052;EFF=UTR_3_PRIME(MODIFIER||135||489|LOC_Os03g21120|protein_coding|CODING|LOC_Os03g21120.1|9|1) FN1382-S.SNP.3:12031403 chr03:012031403 0 W/12031403-12031403 FN1382-S Single Base Substitution T-C INTRON HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2542-S.SNP.3:12038169 chr03:012038169 0 W/12038169-12038169 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.995967;DP=2199;DP4=1213,923,3,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000454752;MQB=0.00102148;MQSB=0.990265;RPB=0.598454;SGB=21.981;VDB=0.871216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.3:12039010 chr03:012039010 0 W/12039010-12039010 FN3859-S SNP A -> T AC=1;AN=158;BQB=0.811547;DP=2868;DP4=1521,1241,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.59929e-06;MQSB=0.79617;RPB=0.98176;SGB=34.0735;VDB=0.848275;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.3:12041115 chr03:012041115 0 W/12041115-12041115 FN4221-S SNP T -> C AC=1;AN=170;BQB=0.973814;DP=2619;DP4=1048,1346,2,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=5.00448e-07;MQSB=0.811596;RPB=0.936998;SGB=31.4354;VDB=0.853679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.3:12042084 chr03:012042084 0 W/12042084-12042084 FN3360-S SNP T -> G AC=1;AN=184;BQB=0.976573;DP=2897;DP4=1422,1364,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.92797e-09;MQSB=0.984185;RPB=0.96926;SGB=39.2697;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.3:12042471 chr03:012042471 0 W/12042471-12042471 FN3532-S SNP C -> A AC=1;AN=188;BQB=0.994868;DP=2785;DP4=1254,1407,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12506e-15;MQSB=0.996467;RPB=0.711871;SGB=78.5038;VDB=0.384976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.3:12058563 chr03:012058563 0 W/12058563-12058563 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.684409;DP=4379;DP4=2110,2029,9,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.17122e-15;MQSB=0.765956;RPB=0.946111;SGB=23.7055;VDB=0.962809;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.3:12061398 chr03:012061398 0 W/12061398-12061398 FN1116-S Single Base Substitution A-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN939-S.SNP.3:12071705 chr03:012071705 0 W/12071705-12071705 FN939-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN4081-S.SNP.3:12073147 chr03:012073147 0 W/12073147-12073147 FN4081-S SNP A -> T AC=2;AN=182;BQB=0.888858;DP=2742;DP4=1331,1315,11,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00255288;MQB=1.05554e-11;MQSB=0.148395;RPB=0.900028;SGB=107.263;VDB=0.705238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.3:12081102 chr03:012081102 0 W/12081102-12081102 FN3837-S SNP A -> T AC=1;AN=190;BQB=0.61165;DP=3179;DP4=1549,1416,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000314564;MQB=6.26919e-06;MQSB=0.906837;RPB=0.930582;SGB=28.9929;VDB=0.810801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E48D|1926|LOC_Os03g21180|protein_coding|CODING|LOC_Os03g21180.1|1|1) FN3837-S.SNP.3:12081103 chr03:012081103 0 W/12081103-12081103 FN3837-S SNP G -> T AC=1;AN=190;BQB=0.976938;DP=3189;DP4=1675,1423,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000313578;MQB=1.50781e-05;MQSB=0.815621;RPB=0.65568;SGB=39.9877;VDB=0.627244;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G49*|1926|LOC_Os03g21180|protein_coding|CODING|LOC_Os03g21180.1|1|1);LOF=(LOC_Os03g21180|LOC_Os03g21180|1|1.00);NMD=(LOC_Os03g21180|LOC_Os03g21180|1|1.00) FN2731-S.SNP.3:12089882 chr03:012089882 0 W/12089882-12089882 FN2731-S SNP C -> G AC=1;AN=200;BQB=0.613101;DP=4303;DP4=2115,1956,7,12;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.115501;MQB=0.934545;MQSB=0;RPB=0.739885;SGB=-36.1052;VDB=0.0157832;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aCc|S372T|1042|LOC_Os03g21190|protein_coding|CODING|LOC_Os03g21190.1|1|1) FN3393-S.SNP.3:12095836 chr03:012095836 0 W/12095836-12095836 FN3393-S SNP A -> C AC=1;AN=184;BQB=0.678852;DP=2901;DP4=1323,1440,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68348e-09;MQSB=0.999203;RPB=0.909508;SGB=35.884;VDB=0.399313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.3:12103263 chr03:012103263 0 W/12103263-12103263 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.758029;DP=2733;DP4=1401,1224,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.3126e-09;MQSB=0.983922;RPB=0.991094;SGB=80.9724;VDB=0.845926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E51K|101|LOC_Os03g21200|protein_coding|CODING|LOC_Os03g21200.1|1|1) FN2608-S.SNP.3:12109152 chr03:012109152 0 W/12109152-12109152 FN2608-S SNP A -> T AC=1;AN=198;BQB=0.77594;DP=4258;DP4=2025,2011,12,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0857e-09;MQSB=0.971846;RPB=0.994439;SGB=63.3342;VDB=0.233892;EFF=INTERGENIC(MODIFIER||||||||||1) FN960-S.SNP.3:12115406 chr03:012115406 0 W/12115406-12115406 FN960-S Single Base Substitution T-C INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN3866-S.SNP.3:12122393 chr03:012122393 0 W/12122393-12122393 FN3866-S SNP G -> C AC=1;AN=158;BQB=0.945601;DP=2925;DP4=1499,1339,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.14525e-06;MQSB=0.883139;RPB=0.8997;SGB=33.9591;VDB=0.583058;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E833Q|975|LOC_Os03g21230|protein_coding|CODING|LOC_Os03g21230.1|17|1) FN3360-S.SNP.3:12135986 chr03:012135986 0 W/12135986-12135986 FN3360-S SNP C -> A AC=1;AN=184;BQB=0.982687;DP=2788;DP4=1389,1295,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.25157e-10;MQSB=0.964936;RPB=0.644916;SGB=62.3078;VDB=0.0217832;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V178F|631|LOC_Os03g21250|protein_coding|CODING|LOC_Os03g21250.1|6|1) FN1257-S.SNP.3:12141096 chr03:012141096 0 W/12141096-12141096 FN1257-S Single Base Substitution G-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN760-S.SNP.3:12141160 chr03:012141160 0 W/12141160-12141160 FN760-S Single Base Substitution T-G INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. W22-2-1.SNP.3:12142104 chr03:012142104 0 W/12142104-12142104 W22-2-1 Single Base Substitution A-C INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN565-S.SNP.3:12146766 chr03:012146766 0 W/12146766-12146766 FN565-S Single Base Substitution G-A INTRON HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2397.SNP.3:12147081 chr03:012147081 0 W/12147081-12147081 FN2397 SNP G -> A AC=1;AN=200;BQB=0.500945;DP=5218;DP4=2547,2442,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000191644;MQB=1.80167e-07;MQSB=0.769762;RPB=0.23903;SGB=-14.9257;VDB=0.913686;EFF=INTRON(MODIFIER||||558|LOC_Os03g21260|protein_coding|CODING|LOC_Os03g21260.1|2|1) FN2426.SNP.3:12153270 chr03:012153270 0 W/12153270-12153270 FN2426 SNP G -> T AC=1;AN=200;BQB=0.284432;DP=4374;DP4=1941,2221,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.60438e-14;MQSB=0.88104;RPB=0.940631;SGB=104.921;VDB=0.31935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P133T|567|LOC_Os03g21270|protein_coding|CODING|LOC_Os03g21270.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P639T|1073|LOC_Os03g21270|protein_coding|CODING|LOC_Os03g21270.1|9|1) FN3358-S.SNP.3:12163047 chr03:012163047 0 W/12163047-12163047 FN3358-S SNP C -> T AC=2;AN=184;BQB=0.989304;DP=4189;DP4=2309,1750,32,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16114e-29;MQSB=0.939456;RPB=0.598592;SGB=225.092;VDB=0.460544;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.3:12163501 chr03:012163501 0 W/12163501-12163501 FN904-S Single Base Substitution G-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1057-S.SNP.3:12164872 chr03:012164872 0 W/12164872-12164872 FN1057-S Single Base Substitution C-T INTERGENIC HOMO SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2449.SNP.3:12166505 chr03:012166505 0 W/12166505-12166505 FN2449 SNP C -> T AC=2;AN=200;BQB=0.855111;DP=4091;DP4=1887,1876,18,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.51557e-19;MQSB=0.478128;RPB=0.996127;SGB=169.394;VDB=0.863036;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.3:12167026 chr03:012167026 0 W/12167026-12167026 FN4001-S SNP T -> C AC=1;AN=168;BQB=0.861577;DP=2557;DP4=1170,1080,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.53795e-09;MQSB=0.892512;RPB=0.619611;SGB=-66.4989;VDB=0.222071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.3:12169676 chr03:012169676 0 W/12169676-12169676 FN1556-S Single Base Substitution T-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2106-S.SNP.3:12169676 chr03:012169676 0 W/12169676-12169676 FN2106-S SNP T -> A AC=2;AN=168;BQB=0.86238;DP=3428;DP4=1984,1403,21,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.24707e-17;MQSB=0.976372;RPB=0.864207;SGB=93.0718;VDB=0.227336;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:12169676 chr03:012169676 0 W/12169676-12169676 FN505-S Single Base Substitution T-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2687-S.SNP.3:12170095 chr03:012170095 0 W/12170095-12170095 FN2687-S SNP C -> T AC=2;AN=200;BQB=0.477278;DP=4934;DP4=2313,2336,15,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.8206e-14;MQSB=0.899785;RPB=0.536396;SGB=94.3471;VDB=0.913904;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.3:12171817 chr03:012171817 0 W/12171817-12171817 FN1180-S Single Base Substitution G-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3310-S.SNP.3:12171836 chr03:012171836 0 W/12171836-12171836 FN3310-S SNP A -> T AC=1;AN=184;BQB=0.872505;DP=2835;DP4=1154,1494,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.40015e-10;MQSB=0.796676;RPB=0.847976;SGB=-37.665;VDB=0.396313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.3:12171836 chr03:012171836 0 W/12171836-12171836 FN3559-S SNP A -> T AC=1;AN=188;BQB=0.451824;DP=2722;DP4=1112,1440,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.05316e-11;MQSB=0.918068;RPB=0.618565;SGB=11.7114;VDB=0.167399;EFF=INTERGENIC(MODIFIER||||||||||1) FN-100.SNP.3:12171967 chr03:012171967 0 W/12171967-12171967 FN-100 Single Base Substitution A-T INTERGENIC HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN803-S.SNP.3:12175248 chr03:012175248 0 W/12175248-12175248 FN803-S Single Base Substitution G-T INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN453-S.SNP.3:12180174 chr03:012180174 0 W/12180174-12180174 FN453-S Single Base Substitution G-A INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2337.SNP.3:12193656 chr03:012193656 0 W/12193656-12193656 FN2337 SNP G -> A AC=1;AN=192;BQB=0.997401;DP=5397;DP4=2457,2635,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0259403;MQB=0.00180854;MQSB=0.934248;RPB=0.98518;SGB=86.1165;VDB=0.27224;EFF=INTRON(MODIFIER||||992|LOC_Os03g21310|protein_coding|CODING|LOC_Os03g21310.1|3|1) FN899-S.SNP.3:12212667 chr03:012212667 0 W/12212667-12212667 FN899-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3090-S.SNP.3:12222116 chr03:012222116 0 W/12222116-12222116 FN3090-S SNP A -> G AC=2;AN=184;BQB=0.956304;DP=2729;DP4=1431,1160,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.1835e-13;MQSB=0.946503;RPB=0.530298;SGB=81.5311;VDB=0.576679;EFF=INTRON(MODIFIER||||206|LOC_Os03g21370|protein_coding|CODING|LOC_Os03g21370.1|2|1) FN322-S.SNP.3:12223484 chr03:012223484 0 W/12223484-12223484 FN322-S Single Base Substitution T-A INTERGENIC HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN322-S.SNP.3:12223485 chr03:012223485 0 W/12223485-12223485 FN322-S Single Base Substitution T-A INTERGENIC HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3915-S.SNP.3:12225238 chr03:012225238 0 W/12225238-12225238 FN3915-S SNP T -> A AC=1;AN=158;BQB=0.998914;DP=2421;DP4=1218,1091,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.92668e-05;MQSB=0.999749;RPB=0.983022;SGB=9.60209;VDB=0.597417;EFF=UTR_3_PRIME(MODIFIER||196||190|LOC_Os03g21380|protein_coding|CODING|LOC_Os03g21380.1|1|1),INTRON(MODIFIER||||190|LOC_Os03g21380|protein_coding|CODING|LOC_Os03g21380.2|1|1) FN2648-S.SNP.3:12233342 chr03:012233342 0 W/12233342-12233342 FN2648-S SNP A -> G AC=2;AN=200;BQB=0.533356;DP=4734;DP4=1914,2567,19,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2433e-18;MQSB=0.984942;RPB=0.912917;SGB=39.9882;VDB=0.887276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.3:12239916 chr03:012239916 0 W/12239916-12239916 FN3438-S SNP T -> C AC=1;AN=184;BQB=0.83614;DP=2613;DP4=1247,1289,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51325e-07;MQSB=0.999451;RPB=0.772448;SGB=35.7479;VDB=0.0442436;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.3:12271237 chr03:012271237 0 W/12271237-12271237 FN459-S Single Base Substitution C-T INTERGENIC HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2554-S.SNP.3:12276555 chr03:012276555 0 W/12276555-12276555 FN2554-S SNP T -> A AC=1;AN=198;BQB=0.364595;DP=3999;DP4=1889,1831,17,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.81369e-16;MQSB=0.986724;RPB=0.984171;SGB=79.6954;VDB=0.194165;EFF=UTR_3_PRIME(MODIFIER||304||311|LOC_Os03g21490|protein_coding|CODING|LOC_Os03g21490.1|7|1),UTR_3_PRIME(MODIFIER||304||311|LOC_Os03g21490|protein_coding|CODING|LOC_Os03g21490.2|6|1) FN911-S.SNP.3:12279138 chr03:012279138 0 W/12279138-12279138 FN911-S Single Base Substitution G-T INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3324-S.SNP.3:12302053 chr03:012302053 0 W/12302053-12302053 FN3324-S SNP T -> G AC=1;AN=184;BQB=0.949305;DP=2756;DP4=1485,1193,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.87197e-06;MQSB=0.998396;RPB=0.981216;SGB=21.6609;VDB=0.675141;EFF=INTRON(MODIFIER||||1180|LOC_Os03g21530|protein_coding|CODING|LOC_Os03g21530.1|8|1),INTRON(MODIFIER||||431|LOC_Os03g21530|protein_coding|CODING|LOC_Os03g21530.2|3|1) FN729-S.SNP.3:12315514 chr03:012315514 0 W/12315514-12315514 FN729-S Single Base Substitution T-C INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN-225.SNP.3:12323952 chr03:012323952 0 W/12323952-12323952 FN-225 Single Base Substitution C-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1122-S.SNP.3:12332465 chr03:012332465 0 W/12332465-12332465 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1011-S.SNP.3:12333606 chr03:012333606 0 W/12333606-12333606 FN1011-S Single Base Substitution G-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3512-S.SNP.3:12333874 chr03:012333874 0 W/12333874-12333874 FN3512-S SNP C -> T AC=1;AN=188;BQB=0.899958;DP=2820;DP4=1375,1316,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03971e-06;MQSB=0.49473;RPB=0.999383;SGB=43.0708;VDB=0.48952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.3:12334557 chr03:012334557 0 W/12334557-12334557 FN2364 SNP G -> T AC=2;AN=192;BQB=0.985372;DP=5121;DP4=2349,2242,23,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.01888e-25;MQSB=0.975385;RPB=0.781675;SGB=-217.253;VDB=0.967601;EFF=UTR_3_PRIME(MODIFIER||446||421|LOC_Os03g21600|protein_coding|CODING|LOC_Os03g21600.2|5|1),UTR_3_PRIME(MODIFIER||446||421|LOC_Os03g21600|protein_coding|CODING|LOC_Os03g21600.1|4|1) FN318-S.SNP.3:12344364 chr03:012344364 0 W/12344364-12344364 FN318-S Single Base Substitution C-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3802-S.SNP.3:12347957 chr03:012347957 0 W/12347957-12347957 FN3802-S SNP G -> A AC=1;AN=190;BQB=0.999969;DP=2163;DP4=1060,991,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68197e-08;MQSB=0.999651;RPB=0.99053;SGB=53.6492;VDB=0.122831;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G118E|347|LOC_Os03g21630|protein_coding|CODING|LOC_Os03g21630.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G118E|229|LOC_Os03g21630|protein_coding|CODING|LOC_Os03g21630.2|1|1) FN625-S.SNP.3:12350798 chr03:012350798 0 W/12350798-12350798 FN625-S Single Base Substitution A-T INTRON HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2688-S.SNP.3:12352564 chr03:012352564 0 W/12352564-12352564 FN2688-S SNP T -> A AC=2;AN=200;BQB=0.675443;DP=4995;DP4=2342,2323,16,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.71986e-12;MQSB=0.97477;RPB=0.62203;SGB=50.3263;VDB=0.804187;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V316|347|LOC_Os03g21630|protein_coding|CODING|LOC_Os03g21630.1|7|1),UTR_3_PRIME(MODIFIER||569||229|LOC_Os03g21630|protein_coding|CODING|LOC_Os03g21630.2|6|1) FN3286-S.SNP.3:12353694 chr03:012353694 0 W/12353694-12353694 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.988665;DP=3520;DP4=1847,1533,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.05068e-07;MQSB=0.978924;RPB=0.999644;SGB=28.7043;VDB=0.948079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.3:12355782 chr03:012355782 0 W/12355782-12355782 FN1478-S Single Base Substitution G-A INTRON HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2450.SNP.3:12356585 chr03:012356585 0 W/12356585-12356585 FN2450 SNP G -> C AC=1;AN=200;BQB=0.420484;DP=4803;DP4=2154,2395,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58738e-10;MQSB=0.58727;RPB=0.373777;SGB=54.6902;VDB=0.066849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A126P|645|LOC_Os03g21640|protein_coding|CODING|LOC_Os03g21640.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A126P|645|LOC_Os03g21640|protein_coding|CODING|LOC_Os03g21640.1|3|1) FN2293.SNP.3:12360213 chr03:012360213 0 W/12360213-12360213 FN2293 SNP G -> A AC=1;AN=192;BQB=0.893953;DP=4916;DP4=2500,2149,11,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12048e-08;MQSB=0.993164;RPB=0.848069;SGB=-14.7687;VDB=0.986071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.3:12372466 chr03:012372466 0 W/12372466-12372466 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.212649;DP=2975;DP4=1347,1504,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59332e-06;MQSB=0.969659;RPB=0.696338;SGB=62.7569;VDB=0.63814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.3:12376012 chr03:012376012 0 W/12376012-12376012 FN-192 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g21680 phospholipid-transporting ATPase, putative, expressed SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN-192.SNP.3:12376015 chr03:012376015 0 W/12376015-12376015 FN-192 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g21680 phospholipid-transporting ATPase, putative, expressed SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2474.SNP.3:12380236 chr03:012380236 0 W/12380236-12380236 FN2474 SNP T -> A AC=1;AN=200;BQB=0.501947;DP=4617;DP4=2256,2128,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216591;MQB=1.69417e-08;MQSB=0.892507;RPB=0.555857;SGB=19.0642;VDB=0.548574;EFF=UTR_3_PRIME(MODIFIER||605||1302|LOC_Os03g21680|protein_coding|CODING|LOC_Os03g21680.4|8|1),UTR_3_PRIME(MODIFIER||605||1302|LOC_Os03g21680|protein_coding|CODING|LOC_Os03g21680.3|9|1),UTR_3_PRIME(MODIFIER||605||1302|LOC_Os03g21680|protein_coding|CODING|LOC_Os03g21680.1|9|1),UTR_3_PRIME(MODIFIER||605||1302|LOC_Os03g21680|protein_coding|CODING|LOC_Os03g21680.2|10|1) FN3821-S.SNP.3:12389061 chr03:012389061 0 W/12389061-12389061 FN3821-S SNP A -> T AC=2;AN=190;BQB=0.998872;DP=2719;DP4=1058,1565,5,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.61835e-12;MQSB=0.975174;RPB=0.868275;SGB=85.5263;VDB=0.167399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.3:12389148 chr03:012389148 0 W/12389148-12389148 FN1725-S SNP T -> A AC=1;AN=188;BQB=0.291162;DP=4777;DP4=2756,1967,13,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000209336;MQB=1.00593e-12;MQSB=0.87297;RPB=0.821839;SGB=-7.93693;VDB=0.765809;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.3:12392025 chr03:012392025 0 W/12392025-12392025 FN458-S Single Base Substitution G-A INTERGENIC HOMO SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN4174-S.SNP.3:12400261 chr03:012400261 0 W/12400261-12400261 FN4174-S SNP T -> A AC=2;AN=170;BQB=0.52428;DP=2725;DP4=1119,1448,9,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.34958e-08;MQSB=0.999519;RPB=0.982433;SGB=55.5339;VDB=0.252783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.3:12409120 chr03:012409120 0 W/12409120-12409120 FN1281-S Single Base Substitution G-A INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN-223.SNP.3:12417477 chr03:012417477 0 W/12417477-12417477 FN-223 Single Base Substitution A-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN1650-S.SNP.3:12419285 chr03:012419285 0 W/12419285-12419285 FN1650-S Single Base Substitution G-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2152-S.SNP.3:12433111 chr03:012433111 0 W/12433111-12433111 FN2152-S SNP C -> T AC=1;AN=168;BQB=0.462192;DP=1906;DP4=866,981,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00840692;MQSB=0.998607;RPB=0.507011;SGB=-18.819;VDB=0.940883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:12436286 chr03:012436286 0 W/12436286-12436286 FN2659-S SNP C -> T AC=2;AN=200;BQB=0.806932;DP=4741;DP4=2685,1696,32,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.33949e-29;MQSB=0.952775;RPB=0.656556;SGB=224.656;VDB=0.10344;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.3:12442171 chr03:012442171 0 W/12442171-12442171 FN_827-1 Single Base Substitution T-C Homo LOC_Os03g21770 phosphoenolpyruvate carboxylase kinase, putative, expressed SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1379-S.SNP.3:12442289 chr03:012442289 0 W/12442289-12442289 FN1379-S Single Base Substitution T-A INTRON Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. W385-6-8-4.SNP.3:12445419 chr03:012445419 0 W/12445419-12445419 W385-6-8-4 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g21780 pentatricopeptide repeat domain containing protein, putative, expressed SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2667-S.SNP.3:12451475 chr03:012451475 0 W/12451475-12451475 FN2667-S SNP T -> A AC=1;AN=200;BQB=0.45987;DP=4784;DP4=2194,2223,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34757e-09;MQSB=0.886092;RPB=0.984204;SGB=-11.8999;VDB=0.531618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.3:12454731 chr03:012454731 0 W/12454731-12454731 FN3820-S SNP A -> G AC=1;AN=190;BQB=0.934342;DP=2918;DP4=1263,1519,4,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67566e-11;MQSB=0.990426;RPB=0.991864;SGB=76.4186;VDB=0.899334;EFF=INTRON(MODIFIER||||329|LOC_Os03g21800|protein_coding|CODING|LOC_Os03g21800.1|2|1),INTRON(MODIFIER||||329|LOC_Os03g21800|protein_coding|CODING|LOC_Os03g21800.2|2|1) FN2474.SNP.3:12456337 chr03:012456337 0 W/12456337-12456337 FN2474 SNP A -> G AC=1;AN=200;BQB=0.00498127;DP=4820;DP4=2289,2158,14,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67692e-18;MQSB=0.977927;RPB=0.199069;SGB=71.1676;VDB=0.411682;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.3:12457301 chr03:012457301 0 W/12457301-12457301 FN3459-S SNP G -> A AC=2;AN=184;BQB=0.952575;DP=2884;DP4=1598,1217,13,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.87882e-12;MQSB=0.999095;RPB=0.991074;SGB=93.9603;VDB=0.0743637;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.3:12472619 chr03:012472619 0 W/12472619-12472619 FN4272-S SNP G -> C AC=1;AN=170;BQB=0.998039;DP=2605;DP4=1163,1356,14,19;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.42844e-19;MQSB=0.999933;RPB=0.582945;SGB=141.168;VDB=0.960514;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.3:12476324 chr03:012476324 0 W/12476324-12476324 FN2594-S SNP A -> C AC=1;AN=198;BQB=0.759647;DP=4511;DP4=2013,2269,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02503e-10;MQSB=0.765757;RPB=0.400294;SGB=6.15916;VDB=0.38248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.3:12476343 chr03:012476343 0 W/12476343-12476343 FN3440-S SNP A -> G AC=1;AN=184;BQB=0.999986;DP=2985;DP4=1438,1435,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.64864e-13;MQSB=0.876379;RPB=0.425057;SGB=38.4058;VDB=0.175998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.3:12478625 chr03:012478625 0 W/12478625-12478625 FN1254-S Single Base Substitution C-T INTRON HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1008-S.SNP.3:12488378 chr03:012488378 0 W/12488378-12488378 FN1008-S Single Base Substitution C-T INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN-396.SNP.3:12488945 chr03:012488945 0 W/12488945-12488945 FN-396 Single Base Substitution A-G INTERGENIC HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN4325-S.SNP.3:12491478 chr03:012491478 0 W/12491478-12491478 FN4325-S SNP T -> A AC=1;AN=170;BQB=0.874445;DP=2426;DP4=1146,1222,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.2106e-08;MQSB=0.999554;RPB=0.501911;SGB=34.878;VDB=0.694814;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.3:12505549 chr03:012505549 0 W/12505549-12505549 FN4148-S SNP G -> C AC=1;AN=170;BQB=0.459879;DP=2675;DP4=1375,1210,11,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.92096e-09;MQSB=0.992943;RPB=0.90261;SGB=65.8619;VDB=0.677454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.3:12511038 chr03:012511038 0 W/12511038-12511038 FN3780-S SNP T -> A AC=1;AN=190;BQB=0.922658;DP=2447;DP4=1305,1037,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.54656e-07;MQSB=0.982223;RPB=0.871001;SGB=44.5415;VDB=0.260266;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.3:12514739 chr03:012514739 0 W/12514739-12514739 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-176.SNP.3:12521902 chr03:012521902 0 W/12521902-12521902 FN-176 Single Base Substitution C-T INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN880-S.SNP.3:12534127 chr03:012534127 0 W/12534127-12534127 FN880-S Single Base Substitution C-T INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3362-S.SNP.3:12549233 chr03:012549233 0 W/12549233-12549233 FN3362-S SNP T -> A AC=1;AN=184;BQB=0.909633;DP=2770;DP4=1322,1359,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.03371e-11;MQSB=0.999853;RPB=0.981455;SGB=71.3514;VDB=0.546717;EFF=INTRON(MODIFIER||||502|LOC_Os03g21950|protein_coding|CODING|LOC_Os03g21950.1|8|1) FN3362-S.SNP.3:12549234 chr03:012549234 0 W/12549234-12549234 FN3362-S SNP T -> A AC=1;AN=184;BQB=0.99859;DP=2775;DP4=1327,1371,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.15003e-11;MQSB=0.993948;RPB=0.950034;SGB=56.8786;VDB=0.673257;EFF=INTRON(MODIFIER||||502|LOC_Os03g21950|protein_coding|CODING|LOC_Os03g21950.1|8|1) FN-68.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN-68 Single Base Substitution T-A INTRON HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2395.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN2395 SNP T -> A AC=2;AN=200;BQB=0.963013;DP=5175;DP4=2417,2287,27,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.31175e-29;MQSB=0.999132;RPB=0.797612;SGB=-112.709;VDB=0.185788;EFF=INTRON(MODIFIER||||502|LOC_Os03g21950|protein_coding|CODING|LOC_Os03g21950.1|5|1) FN2705-S.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN2705-S SNP T -> A AC=2;AN=200;BQB=0.773266;DP=5187;DP4=2426,2426,30,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.15302e-24;MQSB=0.90622;RPB=0.998615;SGB=57.645;VDB=0.0231943;EFF=INTRON(MODIFIER||||502|LOC_Os03g21950|protein_coding|CODING|LOC_Os03g21950.1|5|1) FN3919-S.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN3919-S SNP T -> A AC=2;AN=158;BQB=0.808252;DP=2601;DP4=1163,1322,13,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.16459e-15;MQSB=0.99599;RPB=0.994093;SGB=104.832;VDB=0.105609;EFF=INTRON(MODIFIER||||502|LOC_Os03g21950|protein_coding|CODING|LOC_Os03g21950.1|5|1) FN904-S.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN904-S Single Base Substitution T-A INTRON HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN_827-1.SNP.3:12550076 chr03:012550076 0 W/12550076-12550076 FN_827-1 Single Base Substitution T-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN-310.SNP.3:12559222 chr03:012559222 0 W/12559222-12559222 FN-310 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g21960 aminotransferase, putative, expressed SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-300.SNP.3:12559894 chr03:012559894 0 W/12559894-12559894 FN-300 Single Base Substitution A-T INTERGENIC HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN3925-S.SNP.3:12563951 chr03:012563951 0 W/12563951-12563951 FN3925-S SNP C -> A AC=1;AN=158;BQB=0.922683;DP=2080;DP4=1084,881,15,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.23744e-11;MQSB=0.955617;RPB=0.312327;SGB=67.7679;VDB=0.199289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.3:12564636 chr03:012564636 0 W/12564636-12564636 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.0780663;DP=3259;DP4=1521,1674,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.1322e-08;MQSB=0.999223;RPB=0.959791;SGB=-11.1967;VDB=0.118163;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.3:12565063 chr03:012565063 0 W/12565063-12565063 FN937-S Single Base Substitution C-A INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN1073-S.SNP.3:12573556 chr03:012573556 0 W/12573556-12573556 FN1073-S Single Base Substitution T-G INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN629-S.SNP.3:12575693 chr03:012575693 0 W/12575693-12575693 FN629-S Single Base Substitution T-A INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1458-S.SNP.3:12583811 chr03:012583811 0 W/12583811-12583811 FN1458-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. W464-2-1.SNP.3:12587377 chr03:012587377 0 W/12587377-12587377 W464-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2188-S.SNP.3:12595276 chr03:012595276 0 W/12595276-12595276 FN2188-S SNP A -> C AC=1;AN=190;BQB=0.977791;DP=4014;DP4=1603,2164,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45418e-09;MQSB=0.830024;RPB=0.845409;SGB=62.7569;VDB=0.248785;EFF=INTRON(MODIFIER||||516|LOC_Os03g21980|protein_coding|CODING|LOC_Os03g21980.1|1|1),INTRON(MODIFIER||||374|LOC_Os03g21980|protein_coding|CODING|LOC_Os03g21980.2|1|1) FN2398.SNP.3:12608650 chr03:012608650 0 W/12608650-12608650 FN2398 SNP G -> A AC=1;AN=200;BQB=0.995019;DP=2141;DP4=1285,555,4,4;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.00840729;MQB=0.303094;MQSB=0.637003;RPB=0.979437;SGB=31.2392;VDB=0.0549164;EFF=UTR_5_PRIME(MODIFIER||45||119|LOC_Os03g21999|protein_coding|CODING|LOC_Os03g21999.1|1|1) FN887-S.SNP.3:12622492 chr03:012622492 0 W/12622492-12622492 FN887-S Single Base Substitution C-G INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN3806-S.SNP.3:12626579 chr03:012626579 0 W/12626579-12626579 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.923015;DP=2662;DP4=1374,1174,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.80724e-07;MQSB=0.998466;RPB=0.971389;SGB=32.5467;VDB=0.538108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.3:12629908 chr03:012629908 0 W/12629908-12629908 FN2592-S SNP G -> T AC=1;AN=198;BQB=0.25963;DP=4361;DP4=2134,2018,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000229305;MQB=1.04432e-12;MQSB=0.919698;RPB=0.897746;SGB=76.1002;VDB=0.689525;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R506I|544|LOC_Os03g22040|protein_coding|CODING|LOC_Os03g22040.1|2|1) FN1323-S.SNP.3:12633116 chr03:012633116 0 W/12633116-12633116 FN1323-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g22050 CAMK_KIN1/SNF1/Nim1_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN3462-S.SNP.3:12634516 chr03:012634516 0 W/12634516-12634516 FN3462-S SNP C -> T AC=1;AN=184;BQB=0.982296;DP=2848;DP4=1284,1451,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=2.79661e-05;MQSB=0.549834;RPB=0.743003;SGB=35.1773;VDB=0.0554472;EFF=INTRON(MODIFIER||||451|LOC_Os03g22050|protein_coding|CODING|LOC_Os03g22050.2|1|1),INTRON(MODIFIER||||451|LOC_Os03g22050|protein_coding|CODING|LOC_Os03g22050.1|1|1) FN3651-S.SNP.3:12649624 chr03:012649624 0 W/12649624-12649624 FN3651-S SNP C -> T AC=2;AN=190;BQB=0.0919236;DP=2408;DP4=1331,968,8,13;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00789037;MQB=2.39262e-06;MQSB=0.00025776;RPB=0.999903;SGB=38.983;VDB=0.968338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.3:12653451 chr03:012653451 0 W/12653451-12653451 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.667004;DP=2533;DP4=954,1377,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.65551e-06;MQSB=0.677143;RPB=0.994352;SGB=36.1006;VDB=0.94984;EFF=SYNONYMOUS_STOP(LOW|SILENT|taG/taA|*201|200|LOC_Os03g22080|protein_coding|CODING|LOC_Os03g22080.1|1|1) FN906-S.SNP.3:12659688 chr03:012659688 0 W/12659688-12659688 FN906-S Single Base Substitution T-C INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2788-S.SNP.3:12671581 chr03:012671581 0 W/12671581-12671581 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.1359;DP=4214;DP4=1813,1860,21,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.54413e-18;MQSB=0.997582;RPB=0.784588;SGB=34.8713;VDB=0.827916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.3:12698684 chr03:012698684 0 W/12698684-12698684 FN3455-S SNP G -> C AC=2;AN=184;BQB=0.791019;DP=2427;DP4=1185,1160,18,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32436e-18;MQSB=0.928093;RPB=0.709016;SGB=139.178;VDB=0.459343;EFF=INTRON(MODIFIER||||892|LOC_Os03g22160|protein_coding|CODING|LOC_Os03g22160.1|3|1) FN1440-S.SNP.3:12705674 chr03:012705674 0 W/12705674-12705674 FN1440-S Single Base Substitution C-T INTRON HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN3380-S.SNP.3:12705674 chr03:012705674 0 W/12705674-12705674 FN3380-S SNP C -> T AC=2;AN=184;BQB=0.977392;DP=2729;DP4=1279,1350,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.65611e-16;MQSB=0.989466;RPB=0.759052;SGB=125.613;VDB=0.231403;EFF=INTRON(MODIFIER||||892|LOC_Os03g22160|protein_coding|CODING|LOC_Os03g22160.1|22|1) FN4052-S.SNP.3:12705674 chr03:012705674 0 W/12705674-12705674 FN4052-S SNP C -> T AC=2;AN=168;BQB=0.984583;DP=2610;DP4=1225,1276,13,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.55582e-19;MQSB=0.887019;RPB=0.999858;SGB=117.088;VDB=0.912437;EFF=INTRON(MODIFIER||||892|LOC_Os03g22160|protein_coding|CODING|LOC_Os03g22160.1|22|1) FN939-S.SNP.3:12705674 chr03:012705674 0 W/12705674-12705674 FN939-S Single Base Substitution C-T INTRON HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN1548-S.SNP.3:12716948 chr03:012716948 0 W/12716948-12716948 FN1548-S SNP C -> A AC=1;AN=188;BQB=0.907552;DP=4307;DP4=2067,2190,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.57186e-10;MQSB=0.995934;RPB=0.922975;SGB=-39.1914;VDB=0.462256;EFF=INTRON(MODIFIER||||187|LOC_Os03g22180|protein_coding|CODING|LOC_Os03g22180.1|4|1) FN2547-S.SNP.3:12721304 chr03:012721304 0 W/12721304-12721304 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.856536;DP=3683;DP4=1758,1753,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.96723e-07;MQSB=0.881585;RPB=0.808927;SGB=25.7687;VDB=0.121318;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N1096|1571|LOC_Os03g22190|protein_coding|CODING|LOC_Os03g22190.1|13|1) FN3391-S.SNP.3:12721398 chr03:012721398 0 W/12721398-12721398 FN3391-S SNP T -> C AC=2;AN=184;BQB=0.793088;DP=2894;DP4=1498,1273,16,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06593e-15;MQSB=0.861104;RPB=0.436184;SGB=58.5801;VDB=0.694552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y1065C|1571|LOC_Os03g22190|protein_coding|CODING|LOC_Os03g22190.1|13|1) FN2397.SNP.3:12723619 chr03:012723619 0 W/12723619-12723619 FN2397 SNP A -> G AC=1;AN=200;BQB=0.886535;DP=4540;DP4=2037,2243,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62745e-05;MQSB=0.997633;RPB=0.768712;SGB=25.849;VDB=0.849495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V558A|1571|LOC_Os03g22190|protein_coding|CODING|LOC_Os03g22190.1|5|1) FN2673-S.SNP.3:12725963 chr03:012725963 0 W/12725963-12725963 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.720418;DP=4405;DP4=2128,1959,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.16447e-13;MQSB=0.876947;RPB=0.819409;SGB=20.7261;VDB=0.164093;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A98E|1571|LOC_Os03g22190|protein_coding|CODING|LOC_Os03g22190.1|1|1),SPLICE_SITE_REGION(LOW||||1571|LOC_Os03g22190|protein_coding|CODING|LOC_Os03g22190.1|1|1) FN2260-S.SNP.3:12728966 chr03:012728966 0 W/12728966-12728966 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.390695;DP=4688;DP4=2418,1945,12,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08993e-18;MQSB=0.967788;RPB=0.126088;SGB=110.732;VDB=0.0136562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.3:12731563 chr03:012731563 0 W/12731563-12731563 FN2322 SNP C -> T AC=1;AN=192;BQB=0.344751;DP=4336;DP4=2292,1807,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.82945e-06;MQSB=3.46656e-05;RPB=0.0733638;SGB=36.2157;VDB=0.58133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.3:12735952 chr03:012735952 0 W/12735952-12735952 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.912161;DP=2652;DP4=1281,1259,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0301659;MQB=0.867139;MQSB=0.563757;RPB=0.62636;SGB=71.6393;VDB=0.490863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.3:12738398 chr03:012738398 0 W/12738398-12738398 FN1385-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN838-S.SNP.3:12742718 chr03:012742718 0 W/12742718-12742718 FN838-S Single Base Substitution C-G INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2398.SNP.3:12742835 chr03:012742835 0 W/12742835-12742835 FN2398 SNP A -> T AC=1;AN=200;BQB=0.973916;DP=3342;DP4=1323,1754,7,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000299222;MQB=1.84119e-05;MQSB=0.351678;RPB=0.157464;SGB=19.0642;VDB=0.152434;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.3:12744908 chr03:012744908 0 W/12744908-12744908 FN-245 Single Base Substitution C-T INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2428.SNP.3:12745187 chr03:012745187 0 W/12745187-12745187 FN2428 SNP C -> T AC=1;AN=200;BQB=0.756872;DP=4042;DP4=1695,2128,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000247402;MQB=8.30656e-11;MQSB=0.260851;RPB=0.642967;SGB=77.2904;VDB=0.245978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.3:12746834 chr03:012746834 0 W/12746834-12746834 FN2185-S SNP T -> C AC=1;AN=190;BQB=1.73489e-09;DP=5760;DP4=2625,2602,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.230208;MQB=0.132286;MQSB=0.557232;RPB=0.735798;SGB=16.5421;VDB=0.436864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:12761134 chr03:012761134 0 W/12761134-12761134 FN3694-S SNP C -> T AC=1;AN=190;BQB=0.976773;DP=2753;DP4=1030,1542,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73254e-08;MQSB=0.95067;RPB=0.910542;SGB=46.7622;VDB=0.00589069;EFF=INTRON(MODIFIER||||301|LOC_Os03g22250|protein_coding|CODING|LOC_Os03g22250.1|1|1) FN4024-S.SNP.3:12761388 chr03:012761388 0 W/12761388-12761388 FN4024-S SNP T -> A AC=1;AN=168;BQB=0.792595;DP=2291;DP4=1042,1091,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.11295e-07;MQSB=0.169556;RPB=0.912374;SGB=24.6155;VDB=0.674722;EFF=INTRON(MODIFIER||||301|LOC_Os03g22250|protein_coding|CODING|LOC_Os03g22250.1|1|1) FN2602-S.SNP.3:12770082 chr03:012770082 0 W/12770082-12770082 FN2602-S SNP A -> G AC=2;AN=198;BQB=0.77531;DP=4216;DP4=1933,2002,14,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.25277e-18;MQSB=0.999917;RPB=0.999777;SGB=101.266;VDB=0.697285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2352.SNP.3:12770931 chr03:012770931 0 W/12770931-12770931 FN2352 SNP C -> A AC=1;AN=192;BQB=0.0042169;DP=3292;DP4=1095,1901,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000303767;MQB=5.43378e-06;MQSB=0.505739;RPB=0.997594;SGB=-126.436;VDB=0.550554;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.3:12773949 chr03:012773949 0 W/12773949-12773949 FN1227-S Single Base Substitution T-C INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN967-S.SNP.3:12776654 chr03:012776654 0 W/12776654-12776654 FN967-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g22290 retrotransposon protein, putative, unclassified, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2450.SNP.3:12776951 chr03:012776951 0 W/12776951-12776951 FN2450 SNP G -> A AC=1;AN=200;BQB=0.351468;DP=4068;DP4=1958,1920,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81473e-11;MQSB=0.330529;RPB=0.88747;SGB=-10.0844;VDB=0.840679;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K10|1349|LOC_Os03g22300|protein_coding|CODING|LOC_Os03g22300.1|1|1) FN1415-S.SNP.3:12782623 chr03:012782623 0 W/12782623-12782623 FN1415-S Single Base Substitution C-T INTRON HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2388.SNP.3:12783240 chr03:012783240 0 W/12783240-12783240 FN2388 SNP A -> T AC=2;AN=200;BQB=0.971565;DP=4335;DP4=1982,2066,19,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07569e-26;MQSB=0.783204;RPB=0.447202;SGB=238.471;VDB=0.944515;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctT|L1117|1349|LOC_Os03g22300|protein_coding|CODING|LOC_Os03g22300.1|7|1) FN461-S.SNP.3:12783890 chr03:012783890 0 W/12783890-12783890 FN461-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g22300 retrotransposon protein, putative, unclassified, expressed SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN482-S.SNP.3:12783890 chr03:012783890 0 W/12783890-12783890 FN482-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g22300 retrotransposon protein, putative, unclassified, expressed SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN276-S.SNP.3:12785336 chr03:012785336 0 W/12785336-12785336 FN276-S Single Base Substitution G-A INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2619-S.SNP.3:12785364 chr03:012785364 0 W/12785364-12785364 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.690715;DP=3694;DP4=1712,1690,27,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.07486e-23;MQSB=0.566922;RPB=0.374485;SGB=148.003;VDB=0.048558;EFF=INTERGENIC(MODIFIER||||||||||1) FN-47.SNP.3:12786022 chr03:012786022 0 W/12786022-12786022 FN-47 Single Base Substitution T-A INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN718-S.SNP.3:12786431 chr03:012786431 0 W/12786431-12786431 FN718-S Single Base Substitution C-T INTERGENIC HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN729-S.SNP.3:12800054 chr03:012800054 0 W/12800054-12800054 FN729-S Single Base Substitution T-C INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2496.SNP.3:12804076 chr03:012804076 0 W/12804076-12804076 FN2496 SNP T -> G AC=1;AN=200;BQB=0.71908;DP=4197;DP4=1902,2131,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54544e-08;MQSB=0.994823;RPB=0.637078;SGB=54.2646;VDB=0.785479;EFF=INTRON(MODIFIER||||360|LOC_Os03g22350|protein_coding|CODING|LOC_Os03g22350.1|5|1) FN3436-S.SNP.3:12805972 chr03:012805972 0 W/12805972-12805972 FN3436-S SNP G -> A AC=1;AN=184;BQB=0.997471;DP=3032;DP4=1498,1408,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35234e-09;MQSB=0.99775;RPB=0.816022;SGB=66.8296;VDB=0.0326156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.3:12826091 chr03:012826091 0 W/12826091-12826091 FN2246-S SNP T -> C AC=2;AN=190;BQB=0.932769;DP=5188;DP4=2455,2399,23,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.91245e-29;MQSB=0.988967;RPB=0.793221;SGB=113.045;VDB=0.755524;EFF=UTR_3_PRIME(MODIFIER||486||271|LOC_Os03g22400|protein_coding|CODING|LOC_Os03g22400.3|4|1),INTRON(MODIFIER||||418|LOC_Os03g22400|protein_coding|CODING|LOC_Os03g22400.1|4|1),INTRON(MODIFIER||||342|LOC_Os03g22400|protein_coding|CODING|LOC_Os03g22400.2|4|1) W138-2-1.SNP.3:12830027 chr03:012830027 0 W/12830027-12830027 W138-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2231-S.SNP.3:12832018 chr03:012832018 0 W/12832018-12832018 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.999399;DP=5073;DP4=2350,2274,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4768e-06;MQSB=0.0653453;RPB=0.804361;SGB=39.6545;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.3:12838236 chr03:012838236 0 W/12838236-12838236 FN3356-S SNP T -> C AC=1;AN=184;BQB=0.966177;DP=2724;DP4=1176,1434,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000208721;MQSB=0.704604;RPB=0.732604;SGB=18.1394;VDB=0.646494;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D998G|1110|LOC_Os03g22420|protein_coding|CODING|LOC_Os03g22420.1|25|1) FN2286.SNP.3:12838341 chr03:012838341 0 W/12838341-12838341 FN2286 SNP G -> A AC=1;AN=192;BQB=0.502985;DP=5068;DP4=2275,2472,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.16191e-11;MQSB=0.54681;RPB=0.98439;SGB=13.6122;VDB=0.386349;EFF=INTRON(MODIFIER||||1110|LOC_Os03g22420|protein_coding|CODING|LOC_Os03g22420.1|24|1) FN3659-S.SNP.3:12843807 chr03:012843807 0 W/12843807-12843807 FN3659-S SNP C -> A AC=1;AN=190;BQB=0.694902;DP=3162;DP4=1456,1588,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53826e-06;MQSB=0.994166;RPB=0.990144;SGB=13.4442;VDB=0.740319;EFF=INTRON(MODIFIER||||1110|LOC_Os03g22420|protein_coding|CODING|LOC_Os03g22420.1|9|1),INTRON(MODIFIER||||914|LOC_Os03g22420|protein_coding|CODING|LOC_Os03g22420.2|9|1) FN_N1-169-1.SNP.3:12844427 chr03:012844427 0 W/12844427-12844427 FN_N1-169-1 Single Base Substitution A-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2410.SNP.3:12850561 chr03:012850561 0 W/12850561-12850561 FN2410 SNP C -> T AC=1;AN=200;BQB=0.629996;DP=4263;DP4=2146,1431,6,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00070373;MQB=0.000172004;MQSB=1.72562e-15;RPB=0.664779;SGB=63.4749;VDB=0.0811703;EFF=INTERGENIC(MODIFIER||||||||||1) FN-177.SNP.3:12853043 chr03:012853043 0 W/12853043-12853043 FN-177 Single Base Substitution A-T INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN2611-S.SNP.3:12853065 chr03:012853065 0 W/12853065-12853065 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.83435;DP=4995;DP4=2272,2471,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01571e-12;MQSB=0.991;RPB=0.646449;SGB=47.7211;VDB=0.921281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.3:12869018 chr03:012869018 0 W/12869018-12869018 FN3413-S SNP G -> A AC=2;AN=184;BQB=0.827667;DP=3535;DP4=1723,1650,17,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.97558e-17;MQSB=0.609855;RPB=0.945975;SGB=123.793;VDB=0.908239;EFF=INTRON(MODIFIER||||447|LOC_Os03g22450|protein_coding|CODING|LOC_Os03g22450.1|1|1) FN1724-S.SNP.3:12879956 chr03:012879956 0 W/12879956-12879956 FN1724-S SNP T -> C AC=2;AN=188;BQB=0.0383016;DP=3821;DP4=2035,1730,25,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.44126e-15;MQSB=0.987976;RPB=0.179328;SGB=-46.4986;VDB=0.503271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.3:12881009 chr03:012881009 0 W/12881009-12881009 FN2323 SNP T -> G AC=1;AN=192;BQB=0.982942;DP=3550;DP4=1080,2101,6,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.56848e-12;MQSB=0.347893;RPB=0.770253;SGB=71.8591;VDB=0.0180151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.3:12886513 chr03:012886513 0 W/12886513-12886513 FN3510-S SNP G -> T AC=1;AN=188;BQB=0.759762;DP=2698;DP4=1323,1289,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0192735;MQB=0.872909;MQSB=1.42749e-05;RPB=0.386338;SGB=53.7007;VDB=0.773862;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E140*|1489|LOC_Os03g22480|protein_coding|CODING|LOC_Os03g22480.1|1|1);LOF=(LOC_Os03g22480|LOC_Os03g22480|1|1.00);NMD=(LOC_Os03g22480|LOC_Os03g22480|1|1.00) FN3494-S.SNP.3:12898876 chr03:012898876 0 W/12898876-12898876 FN3494-S SNP C -> T AC=2;AN=184;BQB=0.96101;DP=2386;DP4=1082,1240,11,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.2948e-14;MQSB=0.996613;RPB=0.416763;SGB=107.526;VDB=0.338612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.3:12910957 chr03:012910957 0 W/12910957-12910957 FN3992-S SNP C -> T AC=2;AN=168;BQB=0.997378;DP=1646;DP4=875,623,10,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.38236e-08;MQSB=0.778497;RPB=0.981168;SGB=78.7577;VDB=0.458107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.3:12912504 chr03:012912504 0 W/12912504-12912504 FN2715-S SNP C -> A AC=1;AN=200;BQB=0.761858;DP=4869;DP4=2009,2601,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56453e-14;MQSB=0.99965;RPB=0.383836;SGB=83.5316;VDB=0.324811;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.3:12914702 chr03:012914702 0 W/12914702-12914702 FN_788-1-1 Single Base Substitution T-C Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2489.SNP.3:12927446 chr03:012927446 0 W/12927446-12927446 FN2489 SNP C -> T AC=1;AN=200;BQB=0.295028;DP=4801;DP4=2279,2128,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.42194e-12;MQSB=0.841542;RPB=0.937993;SGB=72.7161;VDB=0.583416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G123E|248|LOC_Os03g22500|protein_coding|CODING|LOC_Os03g22500.1|1|1) FN2392.SNP.3:12933213 chr03:012933213 0 W/12933213-12933213 FN2392 SNP T -> C AC=1;AN=200;BQB=0.880534;DP=2392;DP4=1348,817,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06718e-06;MQSB=0.0612284;RPB=0.472287;SGB=29.4541;VDB=0.653865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.3:12934380 chr03:012934380 0 W/12934380-12934380 FN1097-S Single Base Substitution T-C INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-315.SNP.3:12934779 chr03:012934779 0 W/12934779-12934779 FN-315 Single Base Substitution G-A INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN3527-S.SNP.3:12936866 chr03:012936866 0 W/12936866-12936866 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.960541;DP=2709;DP4=1325,1287,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.71046e-09;MQSB=0.963059;RPB=0.994587;SGB=35.9843;VDB=0.926609;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.3:12953675 chr03:012953675 0 W/12953675-12953675 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.953483;DP=2615;DP4=1275,1267,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.33787e-09;MQSB=0.918032;RPB=0.555583;SGB=65.4653;VDB=0.348427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.3:12973555 chr03:012973555 0 W/12973555-12973555 FN3430-S SNP T -> C AC=1;AN=184;BQB=0.87561;DP=2982;DP4=1441,1429,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66274e-08;MQSB=0.902003;RPB=0.885545;SGB=23.2751;VDB=0.885663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.3:12981921 chr03:012981921 0 W/12981921-12981921 FN3863-S SNP G -> T AC=1;AN=158;BQB=0.96062;DP=2172;DP4=1108,961,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.88193e-10;MQSB=0.99959;RPB=0.772869;SGB=23.8187;VDB=0.795156;EFF=INTRON(MODIFIER||||868|LOC_Os03g22570|protein_coding|CODING|LOC_Os03g22570.1|10|1),INTRON(MODIFIER||||867|LOC_Os03g22570|protein_coding|CODING|LOC_Os03g22570.2|10|1) FN2542-S.SNP.3:12991373 chr03:012991373 0 W/12991373-12991373 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.567666;DP=4314;DP4=1904,2181,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63356e-09;MQSB=0.98733;RPB=0.929752;SGB=37.1297;VDB=0.657064;EFF=INTRON(MODIFIER||||902|LOC_Os03g22580|protein_coding|CODING|LOC_Os03g22580.1|6|1),INTRON(MODIFIER||||902|LOC_Os03g22580|protein_coding|CODING|LOC_Os03g22580.2|6|1) FN-217.SNP.3:13002236 chr03:013002236 0 W/13002236-13002236 FN-217 Single Base Substitution T-G INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2674-S.SNP.3:13003044 chr03:013003044 0 W/13003044-13003044 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.913429;DP=4792;DP4=2136,2461,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.80789e-10;MQSB=0.923821;RPB=0.998106;SGB=63.4749;VDB=0.781198;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.3:13009163 chr03:013009163 0 W/13009163-13009163 FN4040-S SNP T -> A AC=1;AN=168;BQB=0.999163;DP=2331;DP4=1077,1189,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.87644e-07;MQSB=0.999981;RPB=0.322061;SGB=12.4615;VDB=0.1289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.3:13009164 chr03:013009164 0 W/13009164-13009164 FN2251-S SNP A -> T AC=1;AN=190;BQB=0.956119;DP=4810;DP4=2111,2409,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.81825e-10;MQSB=0.908689;RPB=0.999969;SGB=46.7622;VDB=0.60711;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.3:13009761 chr03:013009761 0 W/13009761-13009761 FN_788-1-1 Single Base Substitution A-G HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN3893-S.SNP.3:13009970 chr03:013009970 0 W/13009970-13009970 FN3893-S SNP T -> C AC=1;AN=158;BQB=0.684152;DP=2117;DP4=1001,791,3,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.94388e-07;MQSB=0.759177;RPB=0.505002;SGB=37.4429;VDB=0.0300093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.3:13014812 chr03:013014812 0 W/13014812-13014812 FN3354-S SNP T -> A AC=1;AN=184;BQB=0.996345;DP=2580;DP4=1354,1137,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95885e-08;MQSB=0.999409;RPB=0.941282;SGB=53.2642;VDB=0.327707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.3:13018320 chr03:013018320 0 W/13018320-13018320 FN1382-S Single Base Substitution T-C INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3630-S.SNP.3:13020443 chr03:013020443 0 W/13020443-13020443 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.80024;DP=3044;DP4=1494,1408,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.73924e-08;MQSB=0.947081;RPB=0.997553;SGB=21.1058;VDB=0.328077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.3:13021165 chr03:013021165 0 W/13021165-13021165 FN-170 Single Base Substitution A-G INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1721-S.SNP.3:13029375 chr03:013029375 0 W/13029375-13029375 FN1721-S SNP T -> C AC=2;AN=188;BQB=0.32007;DP=3410;DP4=1648,1700,21,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.60287e-19;MQSB=0.992149;RPB=0.00156036;SGB=-0.874095;VDB=0.248113;EFF=INTERGENIC(MODIFIER||||||||||1) FN619-S.SNP.3:13032948 chr03:013032948 0 W/13032948-13032948 FN619-S Single Base Substitution A-T STOP_GAINED HET LOC_Os03g22610 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN-294.SNP.3:13038365 chr03:013038365 0 W/13038365-13038365 FN-294 Single Base Substitution C-T INTRON HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3787-S.SNP.3:13042212 chr03:013042212 0 W/13042212-13042212 FN3787-S SNP A -> G AC=1;AN=190;BQB=0.998874;DP=1876;DP4=749,1022,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.1753e-05;MQSB=0.991431;RPB=0.130922;SGB=21.8853;VDB=0.384453;EFF=INTRON(MODIFIER||||404|LOC_Os03g22620|protein_coding|CODING|LOC_Os03g22620.1|3|1) FN3914-S.SNP.3:13051988 chr03:013051988 0 W/13051988-13051988 FN3914-S SNP A -> G AC=2;AN=158;BQB=0.87704;DP=2326;DP4=963,1282,10,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.49491e-12;MQSB=0.975184;RPB=0.998207;SGB=77.6532;VDB=0.492631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.3:13059247 chr03:013059247 0 W/13059247-13059247 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.685162;DP=2895;DP4=1335,1294,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.06439e-10;MQSB=0.395431;RPB=0.604278;SGB=68.0854;VDB=0.429535;EFF=INTRON(MODIFIER||||642|LOC_Os03g22634|protein_coding|CODING|LOC_Os03g22634.1|13|1) FN2555-S.SNP.3:13068437 chr03:013068437 0 W/13068437-13068437 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.963178;DP=4264;DP4=2079,1946,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.07073e-11;MQSB=0.921282;RPB=0.996116;SGB=65.3149;VDB=0.923497;EFF=INTRON(MODIFIER||||642|LOC_Os03g22634|protein_coding|CODING|LOC_Os03g22634.1|4|1) FN2663-S.SNP.3:13073337 chr03:013073337 0 W/13073337-13073337 FN2663-S SNP G -> A AC=1;AN=200;BQB=0.483984;DP=4814;DP4=2326,2191,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79552e-12;MQSB=0.393397;RPB=0.268814;SGB=69.1109;VDB=0.250138;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.3:13093062 chr03:013093062 0 W/13093062-13093062 FN-291 Single Base Substitution A-G INTRON HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2278-S.SNP.3:13099307 chr03:013099307 0 W/13099307-13099307 FN2278-S SNP C -> T AC=2;AN=190;BQB=0.000130272;DP=3775;DP4=2168,1185,24,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.04435e-18;MQSB=0.0837201;RPB=0.43663;SGB=-102.257;VDB=0.10306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.3:13104423 chr03:013104423 0 W/13104423-13104423 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.882376;DP=2874;DP4=1474,1298,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.97857e-14;MQSB=0.992338;RPB=0.999144;SGB=74.4875;VDB=0.732182;EFF=INTRON(MODIFIER||||870|LOC_Os03g22690|protein_coding|CODING|LOC_Os03g22690.1|8|1) FN1075-S.SNP.3:13108725 chr03:013108725 0 W/13108725-13108725 FN1075-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g22690 nucleoporin interacting component, putative, expressed SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1735-S.SNP.3:13112463 chr03:013112463 0 W/13112463-13112463 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.637966;DP=3855;DP4=1977,1824,19,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31689e-14;MQSB=0.92397;RPB=0.769006;SGB=-82.2964;VDB=0.148166;EFF=INTRON(MODIFIER||||403|LOC_Os03g22700|protein_coding|CODING|LOC_Os03g22700.1|4|1) FN1735-S.SNP.3:13113200 chr03:013113200 0 W/13113200-13113200 FN1735-S SNP G -> C AC=1;AN=188;BQB=0.429024;DP=4157;DP4=1985,2122,17,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.11013e-15;MQSB=0.999493;RPB=0.920233;SGB=-43.3017;VDB=0.762347;EFF=INTRON(MODIFIER||||403|LOC_Os03g22700|protein_coding|CODING|LOC_Os03g22700.1|3|1) FN3897-S.SNP.3:13115868 chr03:013115868 0 W/13115868-13115868 FN3897-S SNP T -> A AC=2;AN=158;BQB=0.923962;DP=2123;DP4=905,1099,15,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.10202e-19;MQSB=0.380394;RPB=0.790119;SGB=155.409;VDB=0.246806;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.3:13116834 chr03:013116834 0 W/13116834-13116834 FN904-S Single Base Substitution C-T INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1509-S.SNP.3:13117761 chr03:013117761 0 W/13117761-13117761 FN1509-S Single Base Substitution C-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3491-S.SNP.3:13133280 chr03:013133280 0 W/13133280-13133280 FN3491-S SNP G -> T AC=1;AN=188;BQB=0.399531;DP=2533;DP4=1144,1128,12,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.19514e-06;MQSB=0.700868;RPB=0.466817;SGB=-35.081;VDB=0.00751944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.3:13139461 chr03:013139461 0 W/13139461-13139461 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.647471;DP=3051;DP4=1465,1425,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.20053e-13;MQSB=0.992854;RPB=0.998946;SGB=15.9331;VDB=0.934384;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.3:13142244 chr03:013142244 0 W/13142244-13142244 FN988-S Single Base Substitution G-A INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4093-S.SNP.3:13142377 chr03:013142377 0 W/13142377-13142377 FN4093-S SNP C -> T AC=1;AN=182;BQB=0.976342;DP=2972;DP4=1614,1284,8,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.94708e-06;MQSB=0.415678;RPB=0.479194;SGB=39.6007;VDB=0.10087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.3:13142692 chr03:013142692 0 W/13142692-13142692 FN2640-S SNP G -> A AC=1;AN=200;BQB=0.938879;DP=4814;DP4=2234,2275,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.04349e-14;MQSB=0.98786;RPB=0.0502346;SGB=104.921;VDB=0.25676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.3:13142825 chr03:013142825 0 W/13142825-13142825 FN3413-S SNP C -> G AC=2;AN=184;BQB=0.353943;DP=3384;DP4=1311,1973,9,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.67167e-15;MQSB=0.930522;RPB=0.984866;SGB=68.6673;VDB=0.272712;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.3:13144159 chr03:013144159 0 W/13144159-13144159 FN185-2_3_4 SNP C -> A AC=1;AN=188;BQB=0.993156;DP=2618;DP4=1244,1335,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000229917;MQSB=0.6963;RPB=0.0961041;SGB=25.3545;VDB=0.441513;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.3:13148472 chr03:013148472 0 W/13148472-13148472 FN725-S Single Base Substitution A-C INTERGENIC HOMO SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2430.SNP.3:13152409 chr03:013152409 0 W/13152409-13152409 FN2430 SNP T -> G AC=1;AN=200;BQB=0.700248;DP=4494;DP4=2615,1533,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.32744e-10;MQSB=0.310086;RPB=0.103679;SGB=76.3213;VDB=0.745967;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.3:13163622 chr03:013163622 0 W/13163622-13163622 FN503-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2768-S.SNP.3:13165432 chr03:013165432 0 W/13165432-13165432 FN2768-S SNP T -> C AC=1;AN=198;BQB=0.990385;DP=3915;DP4=1938,1777,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.58448e-14;MQSB=0.985742;RPB=0.993657;SGB=79.6954;VDB=0.667131;EFF=UTR_3_PRIME(MODIFIER||343||403|LOC_Os03g22800|protein_coding|CODING|LOC_Os03g22800.1|6|1),UTR_3_PRIME(MODIFIER||343||231|LOC_Os03g22800|protein_coding|CODING|LOC_Os03g22800.2|4|1),INTRON(MODIFIER||||231|LOC_Os03g22800|protein_coding|CODING|LOC_Os03g22800.3|4|1) FN1459-S.SNP.3:13167563 chr03:013167563 0 W/13167563-13167563 FN1459-S Single Base Substitution A-G INTRON HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN973-S.SNP.3:13169460 chr03:013169460 0 W/13169460-13169460 FN973-S Single Base Substitution A-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2456.SNP.3:13171279 chr03:013171279 0 W/13171279-13171279 FN2456 SNP A -> T AC=1;AN=200;BQB=0.778253;DP=4949;DP4=2504,2124,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42716e-09;MQSB=0.78635;RPB=0.922148;SGB=47.4799;VDB=0.748707;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.3:13171529 chr03:013171529 0 W/13171529-13171529 FN571-S Single Base Substitution T-C INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN4163-S.SNP.3:13176432 chr03:013176432 0 W/13176432-13176432 FN4163-S SNP A -> T AC=1;AN=170;BQB=0.776637;DP=2400;DP4=1061,1236,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000416667;MQB=5.29344e-06;MQSB=0.762158;RPB=0.949622;SGB=34.5445;VDB=0.865278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.3:13177607 chr03:013177607 0 W/13177607-13177607 FN2114-S SNP A -> C AC=2;AN=168;BQB=0.33805;DP=3904;DP4=1827,2001,29,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.04636e-29;MQSB=0.352169;RPB=0.718464;SGB=-119.851;VDB=0.462223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.3:13186527 chr03:013186527 0 W/13186527-13186527 FN3861-S SNP C -> A AC=1;AN=158;BQB=0.921393;DP=2473;DP4=1126,1245,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000968206;MQSB=0.930056;RPB=0.994896;SGB=25.2211;VDB=0.394191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.3:13195664 chr03:013195664 0 W/13195664-13195664 FN2489 SNP T -> C AC=1;AN=200;BQB=0.789197;DP=4839;DP4=2290,2194,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206654;MQB=1.78157e-14;MQSB=0.983801;RPB=0.415987;SGB=72.7161;VDB=0.298133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.3:13196030 chr03:013196030 0 W/13196030-13196030 FN3912-S SNP A -> C AC=1;AN=158;BQB=0.934241;DP=2725;DP4=1346,1265,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.26303e-10;MQSB=0.97857;RPB=0.873715;SGB=60.1755;VDB=0.845537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.3:13197098 chr03:013197098 0 W/13197098-13197098 FN1746-S SNP G -> A AC=2;AN=188;BQB=0.977729;DP=3849;DP4=1654,2118,19,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.57427e-25;MQSB=0.940959;RPB=0.987956;SGB=160;VDB=0.219452;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.3:13197277 chr03:013197277 0 W/13197277-13197277 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.80985;DP=3074;DP4=1425,1515,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.81442e-13;MQSB=0.953065;RPB=0.693502;SGB=82.301;VDB=0.630807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.3:13199556 chr03:013199556 0 W/13199556-13199556 FN3381-S SNP C -> T AC=1;AN=184;BQB=0.866477;DP=3044;DP4=1585,1364,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52878e-08;MQSB=0.973751;RPB=0.983067;SGB=42.7914;VDB=0.698706;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q234|283|LOC_Os03g22830|protein_coding|CODING|LOC_Os03g22830.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q234|283|LOC_Os03g22830|protein_coding|CODING|LOC_Os03g22830.2|2|1) FN3298-S.SNP.3:13201411 chr03:013201411 0 W/13201411-13201411 FN3298-S SNP C -> T AC=2;AN=184;BQB=0.939782;DP=3747;DP4=2219,1420,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.91323e-14;MQSB=0.992019;RPB=0.944598;SGB=103.004;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.3:13209659 chr03:013209659 0 W/13209659-13209659 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.576116;DP=3344;DP4=1212,2069,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.394438;MQB=0.464168;MQSB=0.0791878;RPB=0.744401;SGB=-9.02352;VDB=0.543433;EFF=INTRON(MODIFIER||||793|LOC_Os03g22850|protein_coding|CODING|LOC_Os03g22850.1|5|1) FN2457.SNP.3:13230107 chr03:013230107 0 W/13230107-13230107 FN2457 SNP G -> A AC=2;AN=200;BQB=0.879835;DP=5047;DP4=2202,2526,27,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.86531e-31;MQSB=0.712996;RPB=0.982121;SGB=64.0657;VDB=0.0496975;EFF=INTRON(MODIFIER||||535|LOC_Os03g22890|protein_coding|CODING|LOC_Os03g22890.1|8|1),INTRON(MODIFIER||||535|LOC_Os03g22890|protein_coding|CODING|LOC_Os03g22890.2|8|1) FN2788-S.SNP.3:13233194 chr03:013233194 0 W/13233194-13233194 FN2788-S SNP A -> G AC=1;AN=198;BQB=0.898561;DP=4470;DP4=2431,1805,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00488e-15;MQSB=0.87017;RPB=0.760801;SGB=60.4858;VDB=0.666584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.3:13240957 chr03:013240957 0 W/13240957-13240957 FN-158 Single Base Substitution A-T INTRON HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN4142-S.SNP.3:13242872 chr03:013242872 0 W/13242872-13242872 FN4142-S SNP C -> G AC=1;AN=170;BQB=0.988469;DP=2415;DP4=1238,1119,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.85252e-10;MQSB=0.999771;RPB=0.475505;SGB=65.6427;VDB=0.849155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D971E|1457|LOC_Os03g22900|protein_coding|CODING|LOC_Os03g22900.1|15|1) FN2232-S.SNP.3:13246516 chr03:013246516 0 W/13246516-13246516 FN2232-S SNP G -> A AC=2;AN=190;BQB=0.646379;DP=5043;DP4=2222,2523,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.50477e-22;MQSB=0.998298;RPB=0.8206;SGB=46.0658;VDB=0.150098;EFF=INTRON(MODIFIER||||1457|LOC_Os03g22900|protein_coding|CODING|LOC_Os03g22900.1|21|1) FN774-S.SNP.3:13247787 chr03:013247787 0 W/13247787-13247787 FN774-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2663-S.SNP.3:13257933 chr03:013257933 0 W/13257933-13257933 FN2663-S SNP G -> A AC=1;AN=200;BQB=0.972784;DP=4916;DP4=2456,2201,6,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91594e-12;MQSB=0.694505;RPB=0.998752;SGB=-37.6845;VDB=0.98548;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.3:13257973 chr03:013257973 0 W/13257973-13257973 FN522-S Single Base Substitution G-T INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1473-S.SNP.3:13261868 chr03:013261868 0 W/13261868-13261868 FN1473-S Single Base Substitution G-A INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN704-S.SNP.3:13262125 chr03:013262125 0 W/13262125-13262125 FN704-S Single Base Substitution T-A INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1583-S.SNP.3:13262240 chr03:013262240 0 W/13262240-13262240 FN1583-S Single Base Substitution C-T INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2578-S.SNP.3:13265203 chr03:013265203 0 W/13265203-13265203 FN2578-S SNP C -> T AC=1;AN=198;BQB=0.0468958;DP=3868;DP4=1765,1871,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00336091;MQB=4.83341e-06;MQSB=2.88571e-06;RPB=0.949353;SGB=54.144;VDB=0.993243;EFF=INTERGENIC(MODIFIER||||||||||1) FN-97.SNP.3:13271316 chr03:013271316 0 W/13271316-13271316 FN-97 Single Base Substitution A-T INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-97.SNP.3:13271317 chr03:013271317 0 W/13271317-13271317 FN-97 Single Base Substitution C-T INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2553-S.SNP.3:13272135 chr03:013272135 0 W/13272135-13272135 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.257328;DP=3988;DP4=1784,1919,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.51239e-07;MQSB=0.991068;RPB=0.724152;SGB=21.559;VDB=0.860871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.3:13281132 chr03:013281132 0 W/13281132-13281132 FN1707-S SNP G -> T AC=1;AN=188;BQB=2.52446e-05;DP=3395;DP4=1309,2000,13,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.37775e-06;MQSB=0.840512;RPB=0.0382483;SGB=-433.306;VDB=0.785997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.3:13285614 chr03:013285614 0 W/13285614-13285614 FN2559-S SNP A -> G AC=1;AN=198;BQB=0.999579;DP=4198;DP4=1829,2198,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000220834;MQSB=0.934069;RPB=0.993617;SGB=31.1689;VDB=0.878874;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.3:13286590 chr03:013286590 0 W/13286590-13286590 FN1381-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2611-S.SNP.3:13286778 chr03:013286778 0 W/13286778-13286778 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.903542;DP=5171;DP4=2308,2544,19,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92018e-20;MQSB=0.993071;RPB=0.608268;SGB=84.1935;VDB=0.67939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.3:13293487 chr03:013293487 0 W/13293487-13293487 FN1725-S SNP T -> C AC=1;AN=188;BQB=0.861497;DP=2882;DP4=682,2158,6,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.65871e-10;MQSB=0.751978;RPB=0.920227;SGB=16.3413;VDB=0.176814;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.3:13294957 chr03:013294957 0 W/13294957-13294957 FN4185-S SNP A -> T AC=2;AN=170;BQB=0.845101;DP=2670;DP4=1309,1273,9,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.47994e-08;MQSB=0.909574;RPB=0.950311;SGB=41.7633;VDB=0.988583;EFF=INTRON(MODIFIER||||2614|LOC_Os03g23030|protein_coding|CODING|LOC_Os03g23030.1|3|1) FN1376-S.SNP.3:13299926 chr03:013299926 0 W/13299926-13299926 FN1376-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g23030 aberrant pollen transmission 1, putative, expressed SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2190-S.SNP.3:13313786 chr03:013313786 0 W/13313786-13313786 FN2190-S SNP G -> A AC=2;AN=190;BQB=0.0218093;DP=5316;DP4=2502,2304,38,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.56157e-35;MQSB=0.522187;RPB=0.905428;SGB=224.456;VDB=0.563782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.3:13316715 chr03:013316715 0 W/13316715-13316715 FN2107-S SNP C -> G AC=1;AN=168;BQB=0.00502818;DP=3685;DP4=1933,1702,10,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.16958e-07;MQSB=0.997631;RPB=0.328412;SGB=-257.746;VDB=0.0613825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.3:13319229 chr03:013319229 0 W/13319229-13319229 FN1465-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2660-S.SNP.3:13326217 chr03:013326217 0 W/13326217-13326217 FN2660-S SNP C -> A AC=2;AN=200;BQB=0.947504;DP=5022;DP4=2575,2148,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.41847e-24;MQSB=0.999761;RPB=0.615042;SGB=43.1985;VDB=0.988799;EFF=INTRON(MODIFIER||||836|LOC_Os03g23050|protein_coding|CODING|LOC_Os03g23050.1|12|1) FN2785-S.SNP.3:13328022 chr03:013328022 0 W/13328022-13328022 FN2785-S SNP T -> A AC=1;AN=198;BQB=0.964663;DP=4241;DP4=1976,2102,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.76888e-08;MQSB=0.960457;RPB=0.685562;SGB=36.5539;VDB=0.54971;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.3:13330708 chr03:013330708 0 W/13330708-13330708 FN-349 Single Base Substitution G-A INTRON HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2697-S.SNP.3:13334085 chr03:013334085 0 W/13334085-13334085 FN2697-S SNP C -> T AC=1;AN=200;BQB=0.950906;DP=5687;DP4=3587,1836,14,9;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0483559;MQB=0.100747;MQSB=0;RPB=0.0634764;SGB=100.316;VDB=0.00841405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.3:13335764 chr03:013335764 0 W/13335764-13335764 FN2180-S SNP A -> G AC=1;AN=190;BQB=0.490404;DP=4899;DP4=2196,2329,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.17899e-05;MQSB=0.521583;RPB=0.933863;SGB=18.552;VDB=0.232569;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C750|990|LOC_Os03g23070|protein_coding|CODING|LOC_Os03g23070.1|4|1) FN3438-S.SNP.3:13342004 chr03:013342004 0 W/13342004-13342004 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.99982;DP=3196;DP4=1447,1644,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.19041e-10;MQSB=0.238601;RPB=0.731362;SGB=66.8296;VDB=0.521675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.3:13343920 chr03:013343920 0 W/13343920-13343920 FN1357-S Single Base Substitution A-T INTRON HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1028-S.SNP.3:13361125 chr03:013361125 0 W/13361125-13361125 FN1028-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g23110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1028-S.SNP.3:13361131 chr03:013361131 0 W/13361131-13361131 FN1028-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g23110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1477-S.SNP.3:13370559 chr03:013370559 0 W/13370559-13370559 FN1477-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g23120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN-284.SNP.3:13374013 chr03:013374013 0 W/13374013-13374013 FN-284 Single Base Substitution G-C INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3881-S.SNP.3:13375021 chr03:013375021 0 W/13375021-13375021 FN3881-S SNP G -> C AC=1;AN=158;BQB=0.336665;DP=5765;DP4=2498,3007,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.00555074;MQB=0.00593321;MQSB=3.69317e-21;RPB=0.0412456;SGB=34.0735;VDB=0.269079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.3:13375783 chr03:013375783 0 W/13375783-13375783 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.135369;DP=9315;DP4=3814,4432,476,492;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0312399;MQB=0;MQSB=0.118563;RPB=3.22353e-25;SGB=-6096.8;VDB=0.980457;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.3:13387294 chr03:013387294 0 W/13387294-13387294 FN907-S Single Base Substitution T-C INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3407-S.SNP.3:13388848 chr03:013388848 0 W/13388848-13388848 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.513952;DP=3786;DP4=1612,2073,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0734284;MQB=0.144088;MQSB=4.47886e-07;RPB=0.0520508;SGB=56.8786;VDB=0.041329;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.3:13397715 chr03:013397715 0 W/13397715-13397715 FN1760-S SNP C -> T AC=1;AN=188;BQB=0.90089;DP=3843;DP4=1402,2408,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.15899;MQB=0.511982;MQSB=6.46709e-26;RPB=0.106973;SGB=26.0762;VDB=0.434338;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.3:13400697 chr03:013400697 0 W/13400697-13400697 FN2184-S SNP A -> T AC=1;AN=190;BQB=0.843028;DP=2410;DP4=887,970,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0477178;MQB=0.610921;MQSB=3.18611e-26;RPB=0.466109;SGB=15.9981;VDB=0.0711401;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.3:13401591 chr03:013401591 0 W/13401591-13401591 FN493-S Single Base Substitution G-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2121-S.SNP.3:13402991 chr03:013402991 0 W/13402991-13402991 FN2121-S SNP A -> G AC=1;AN=168;BQB=0.514381;DP=2861;DP4=1692,1127,15,5;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.116742;MQB=0.428289;MQSB=0;RPB=0.986953;SGB=58.7637;VDB=0.467764;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.3:13403001 chr03:013403001 0 W/13403001-13403001 FN3567-S SNP C -> A AC=1;AN=188;BQB=0.429146;DP=3174;DP4=1470,1614,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0132325;MQB=0.000415307;MQSB=0.030489;RPB=0.978798;SGB=33.7061;VDB=0.872099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.3:13403721 chr03:013403721 0 W/13403721-13403721 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.981489;DP=3225;DP4=1594,1541,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000620155;MQB=1.48565e-07;MQSB=0.0236729;RPB=0.52311;SGB=80.782;VDB=0.579247;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.3:13406413 chr03:013406413 0 W/13406413-13406413 FN3504-S SNP C -> T AC=1;AN=188;BQB=0.986005;DP=3338;DP4=1600,1679,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0638107;MQB=0.529607;MQSB=0.00215692;RPB=0.599676;SGB=62.6088;VDB=0.629151;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1340|1724|LOC_Os03g23200|protein_coding|CODING|LOC_Os03g23200.1|7|1) FN_N1-151-1.SNP.3:13418587 chr03:013418587 0 W/13418587-13418587 FN_N1-151-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g23210 retrotransposon protein, putative, unclassified, expressed SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN2588-S.SNP.3:13419222 chr03:013419222 0 W/13419222-13419222 FN2588-S SNP A -> T AC=1;AN=198;BQB=0.974685;DP=4099;DP4=2304,1612,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243962;MQB=1.11264e-08;MQSB=0.90933;RPB=0.369289;SGB=43.7442;VDB=0.538056;EFF=INTRON(MODIFIER||||211|LOC_Os03g23210|protein_coding|CODING|LOC_Os03g23210.1|1|1) FN-198.SNP.3:13419810 chr03:013419810 0 W/13419810-13419810 FN-198 Single Base Substitution G-A INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-192.SNP.3:13420460 chr03:013420460 0 W/13420460-13420460 FN-192 Single Base Substitution C-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN901-S.SNP.3:13420603 chr03:013420603 0 W/13420603-13420603 FN901-S Single Base Substitution A-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2390.SNP.3:13420904 chr03:013420904 0 W/13420904-13420904 FN2390 SNP A -> C AC=1;AN=200;BQB=0.562043;DP=4479;DP4=2323,1880,3,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.52691e-05;MQSB=0.000119262;RPB=0.95507;SGB=35.8441;VDB=0.54263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.3:13426424 chr03:013426424 0 W/13426424-13426424 FN2415 SNP C -> T AC=1;AN=200;BQB=0.967457;DP=3841;DP4=2002,1368,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60911e-08;MQSB=0.229155;RPB=0.995488;SGB=47.4799;VDB=0.907038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.3:13427980 chr03:013427980 0 W/13427980-13427980 FN3776-S SNP C -> G AC=2;AN=190;BQB=0.743021;DP=2533;DP4=1349,1086,14,15;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0153968;MQB=6.80991e-07;MQSB=6.22528e-14;RPB=0.93037;SGB=59.414;VDB=0.880588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.3:13430453 chr03:013430453 0 W/13430453-13430453 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.969414;DP=3280;DP4=1582,1598,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.234146;MQB=0.948676;MQSB=2.00333e-25;RPB=0.743133;SGB=57.4238;VDB=0.258983;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.3:13435492 chr03:013435492 0 W/13435492-13435492 FN1023-S Single Base Substitution T-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN4111-S.SNP.3:13439272 chr03:013439272 0 W/13439272-13439272 FN4111-S SNP G -> T AC=1;AN=182;BQB=0.96237;DP=8430;DP4=3551,4706,26,28;HOB=6.03792e-05;ICB=0.000121422;MQ=29;MQ0F=0.113879;MQB=0.000739136;MQSB=5.29199e-13;RPB=0.1866;SGB=238.078;VDB=0.124691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P597T|1804|LOC_Os03g23220|protein_coding|CODING|LOC_Os03g23220.1|3|1) FN4325-S.SNP.3:13441053 chr03:013441053 0 W/13441053-13441053 FN4325-S SNP C -> A AC=1;AN=170;BQB=0.924184;DP=3856;DP4=2348,1438,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.188797;MQB=0.0146574;MQSB=4.44499e-05;RPB=0.676574;SGB=31.4354;VDB=0.758664;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G74C|1804|LOC_Os03g23220|protein_coding|CODING|LOC_Os03g23220.1|2|1) FN3520-S.SNP.3:13449142 chr03:013449142 0 W/13449142-13449142 FN3520-S SNP A -> T AC=2;AN=188;BQB=0.998801;DP=2697;DP4=1183,1395,15,13;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.091954;MQB=0.0171858;MQSB=8.32597e-05;RPB=0.792672;SGB=121.672;VDB=0.165311;EFF=INTRON(MODIFIER||||491|LOC_Os03g23230|protein_coding|CODING|LOC_Os03g23230.1|1|1) FN2347.SNP.3:13452142 chr03:013452142 0 W/13452142-13452142 FN2347 SNP G -> A AC=1;AN=192;BQB=0.805022;DP=3722;DP4=1796,1669,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0265986;MQB=0.0395633;MQSB=6.8767e-06;RPB=0.89375;SGB=90.2896;VDB=0.646015;EFF=INTRON(MODIFIER||||514|LOC_Os03g23250|protein_coding|CODING|LOC_Os03g23250.1|1|1) FN-54.SNP.3:13453571 chr03:013453571 0 W/13453571-13453571 FN-54 Single Base Substitution C-T INTRON HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN3467-S.SNP.3:13453571 chr03:013453571 0 W/13453571-13453571 FN3467-S SNP C -> T AC=2;AN=184;BQB=0.998179;DP=2903;DP4=1364,1413,17,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.4241e-25;MQSB=0.68624;RPB=0.406575;SGB=196.994;VDB=0.173856;EFF=INTRON(MODIFIER||||514|LOC_Os03g23250|protein_coding|CODING|LOC_Os03g23250.1|1|1) FN2161-S.SNP.3:13454491 chr03:013454491 0 W/13454491-13454491 FN2161-S SNP G -> C AC=1;AN=168;BQB=0.187256;DP=2987;DP4=1190,1759,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.31537e-05;MQSB=0.999964;RPB=0.840412;SGB=-16.665;VDB=0.711884;EFF=INTRON(MODIFIER||||514|LOC_Os03g23250|protein_coding|CODING|LOC_Os03g23250.1|3|1) FN4123-S.SNP.3:13455194 chr03:013455194 0 W/13455194-13455194 FN4123-S SNP C -> T AC=1;AN=182;BQB=0.85143;DP=3248;DP4=1670,1506,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14392e-08;MQSB=0.994622;RPB=0.884585;SGB=42.6494;VDB=0.922013;EFF=INTRON(MODIFIER||||514|LOC_Os03g23250|protein_coding|CODING|LOC_Os03g23250.1|4|1) FN442-S.SNP.3:13459275 chr03:013459275 0 W/13459275-13459275 FN442-S Single Base Substitution C-T INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-300.SNP.3:13462453 chr03:013462453 0 W/13462453-13462453 FN-300 Single Base Substitution C-A INTRON HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN2202-S.SNP.3:13462583 chr03:013462583 0 W/13462583-13462583 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.0170193;DP=13120;DP4=6739,5291,175,95;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00442073;MQB=0;MQSB=0.0331337;RPB=4.40086e-05;SGB=-9797.63;VDB=0.0156363;EFF=INTRON(MODIFIER||||1273|LOC_Os03g23760|protein_coding|CODING|LOC_Os03g23760.1|2|1) W470-2-1.SNP.3:13468724 chr03:013468724 0 W/13468724-13468724 W470-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g23760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1505-S.SNP.3:13469215 chr03:013469215 0 W/13469215-13469215 FN1505-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3376-S.SNP.3:13479986 chr03:013479986 0 W/13479986-13479986 FN3376-S SNP G -> T AC=1;AN=184;BQB=0.997008;DP=5556;DP4=2358,2945,26,23;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0782937;MQB=0.726125;MQSB=5.29115e-10;RPB=0.0233463;SGB=162.532;VDB=0.0337592;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.3:13479987 chr03:013479987 0 W/13479987-13479987 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.806817;DP=5528;DP4=2386,2953,29,25;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0781476;MQB=0.627776;MQSB=2.34032e-09;RPB=0.0423623;SGB=63.1085;VDB=0.0209325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.3:13480792 chr03:013480792 0 W/13480792-13480792 FN2272-S SNP G -> C AC=1;AN=190;BQB=0.154607;DP=5639;DP4=2581,2709,17,19;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0166696;MQB=6.60973e-08;MQSB=0.0710624;RPB=0.669299;SGB=-3.80607;VDB=0.451136;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.3:13481173 chr03:013481173 0 W/13481173-13481173 FN4183-S SNP A -> T AC=1;AN=170;BQB=0.935735;DP=3031;DP4=1605,1323,11,18;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0178159;MQB=1.34519e-07;MQSB=0.00699587;RPB=0.445669;SGB=123.397;VDB=0.278762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.3:13481247 chr03:013481247 0 W/13481247-13481247 FN1551-S Single Base Substitution A-G INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN420-S.SNP.3:13500937 chr03:013500937 0 W/13500937-13500937 FN420-S Single Base Substitution C-G INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN3675-S.SNP.3:13501317 chr03:013501317 0 W/13501317-13501317 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.608361;DP=2870;DP4=1237,1542,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000696864;MQB=0.0011184;MQSB=0.311733;RPB=0.235481;SGB=36.1006;VDB=0.846922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN1288-S Single Base Substitution G-A INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1442-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN1442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1670-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN1670-S SNP G -> A AC=2;AN=188;BQB=0.342272;DP=1470;DP4=723,698,9,6;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.0870748;MQB=0.313475;MQSB=2.81558e-20;RPB=0.950988;SGB=43.0708;VDB=0.189715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.958959;DP=2878;DP4=1360,1398,18,16;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0316192;MQB=0.000125402;MQSB=0.657667;RPB=0.693697;SGB=-43.4624;VDB=0.244122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN3900-S SNP G -> A AC=1;AN=158;BQB=0.866168;DP=2635;DP4=1262,1294,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.0314991;MQB=0.0681503;MQSB=0.20348;RPB=0.979869;SGB=16.7104;VDB=0.493731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN3997-S SNP G -> A AC=1;AN=168;BQB=0.858398;DP=2976;DP4=1418,1451,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.030914;MQB=0.0306284;MQSB=0.0845299;RPB=0.583738;SGB=41.6096;VDB=0.379909;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN871-S.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_N1-213-1.SNP.3:13502297 chr03:013502297 0 W/13502297-13502297 FN_N1-213-1 Single Base Substitution G-A Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3492-S.SNP.3:13504449 chr03:013504449 0 W/13504449-13504449 FN3492-S SNP G -> T AC=2;AN=184;BQB=0.578238;DP=3727;DP4=1858,1715,19,16;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0182452;MQB=0.0414941;MQSB=0.786101;RPB=0.894873;SGB=152.744;VDB=0.920377;EFF=INTERGENIC(MODIFIER||||||||||1) FN3802-S.SNP.3:13505822 chr03:013505822 0 W/13505822-13505822 FN3802-S SNP A -> T AC=1;AN=190;BQB=0.801026;DP=2954;DP4=1406,1450,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46925e-08;MQSB=0.394213;RPB=0.135894;SGB=71.8647;VDB=0.175684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.3:13506049 chr03:013506049 0 W/13506049-13506049 FN3948-S SNP C -> A AC=2;AN=168;BQB=0.766508;DP=2608;DP4=1192,1265,28,32;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00153374;MQB=1.53418e-27;MQSB=0.882299;RPB=0.0108916;SGB=220.584;VDB=0.26563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.3:13506051 chr03:013506051 0 W/13506051-13506051 FN3948-S SNP G -> T AC=2;AN=168;BQB=0.758184;DP=2600;DP4=1186,1276,26,35;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00115385;MQB=9.81744e-26;MQSB=0.829555;RPB=0.0117538;SGB=224.514;VDB=0.105296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.3:13509739 chr03:013509739 0 W/13509739-13509739 FN-264 Single Base Substitution C-T INTRON HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-264.SNP.3:13509740 chr03:013509740 0 W/13509740-13509740 FN-264 Single Base Substitution C-T INTRON HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-410.SNP.3:13510717 chr03:013510717 0 W/13510717-13510717 FN-410 Single Base Substitution T-C INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.3:13510717 chr03:013510717 0 W/13510717-13510717 FN410-S Single Base Substitution T-C INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3722-S.SNP.3:13520878 chr03:013520878 0 W/13520878-13520878 FN3722-S SNP C -> T AC=1;AN=190;BQB=0.871664;DP=5650;DP4=2533,2902,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.318761;MQB=0.00114225;MQSB=4.77859e-19;RPB=0.471969;SGB=80.9724;VDB=0.321546;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T646|1534|LOC_Os03g23830|protein_coding|CODING|LOC_Os03g23830.1|2|1) FN1011-S.SNP.3:13542021 chr03:013542021 0 W/13542021-13542021 FN1011-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g23860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN424-S.SNP.3:13542058 chr03:013542058 0 W/13542058-13542058 FN424-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2376.SNP.3:13548236 chr03:013548236 0 W/13548236-13548236 FN2376 SNP G -> C AC=1;AN=192;BQB=0.0655607;DP=13489;DP4=2675,10300,16,9;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0040774;MQB=4.44038e-09;MQSB=0;RPB=0.0390812;SGB=-68.8078;VDB=0.516353;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.3:13549787 chr03:013549787 0 W/13549787-13549787 FN3440-S SNP T -> A AC=2;AN=184;BQB=0.963895;DP=2876;DP4=1475,1272,22,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000347705;MQB=6.68691e-23;MQSB=0.946042;RPB=0.797323;SGB=88.8416;VDB=0.658452;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.3:13549788 chr03:013549788 0 W/13549788-13549788 FN3440-S SNP G -> A AC=2;AN=184;BQB=0.999872;DP=2860;DP4=1481,1269,20,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00034965;MQB=2.09477e-23;MQSB=0.953241;RPB=0.651841;SGB=130.836;VDB=0.589231;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.3:13550219 chr03:013550219 0 W/13550219-13550219 FN545-S Single Base Substitution G-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN-402.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1333-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN1333-S Single Base Substitution C-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1650-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN1650-S Single Base Substitution C-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1761-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN1761-S SNP C -> T AC=2;AN=188;BQB=0.492379;DP=862;DP4=338,418,5,4;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0417633;MQB=0.994534;MQSB=0.124198;RPB=0.398481;SGB=21.8113;VDB=0.628185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN2296 SNP C -> T AC=2;AN=192;BQB=0.0847282;DP=3798;DP4=2024,1238,17,14;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00210637;MQB=1.24016e-07;MQSB=1.85951e-17;RPB=0.651583;SGB=64.8148;VDB=0.404161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN2755-S SNP C -> T AC=2;AN=200;BQB=0.02585;DP=3476;DP4=1903,1150,16,10;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000863061;MQB=1.88981e-05;MQSB=2.8004e-06;RPB=0.206565;SGB=114.132;VDB=0.611711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.723452;DP=2966;DP4=1409,1372,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00101146;MQB=0.00173454;MQSB=0.601055;RPB=0.934859;SGB=57.786;VDB=0.253659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.488032;DP=1925;DP4=890,873,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00207792;MQB=0.00206071;MQSB=0.0807542;RPB=0.813761;SGB=21.8853;VDB=0.847584;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN402-S Single Base Substitution C-T INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN4138-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN4138-S SNP C -> T AC=1;AN=170;BQB=0.908564;DP=1588;DP4=783,678,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00188917;MQB=0.0150697;MQSB=4.36269e-06;RPB=0.736297;SGB=25.6601;VDB=0.576666;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN714-S.SNP.3:13559330 chr03:013559330 0 W/13559330-13559330 FN714-S Single Base Substitution C-T INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1540-S.SNP.3:13559989 chr03:013559989 0 W/13559989-13559989 FN1540-S Single Base Substitution T-A INTERGENIC Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1053-S.SNP.3:13560804 chr03:013560804 0 W/13560804-13560804 FN1053-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g23890 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1484-S.SNP.3:13563957 chr03:013563957 0 W/13563957-13563957 FN1484-S Single Base Substitution A-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2313.SNP.3:13565552 chr03:013565552 0 W/13565552-13565552 FN2313 SNP A -> C AC=1;AN=192;BQB=0.987274;DP=5029;DP4=2474,2312,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=4.4449e-06;MQSB=5.6433e-09;RPB=0.614715;SGB=8.91915;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.3:13565552 chr03:013565552 0 W/13565552-13565552 FN3967-S SNP A -> C AC=2;AN=182;BQB=0.746511;DP=2854;DP4=1367,1293,21,26;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0.00105116;MQB=3.18564e-13;MQSB=0.000349138;RPB=0.999476;SGB=201.02;VDB=0.715141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.3:13565552 chr03:013565552 0 W/13565552-13565552 FN3979-S SNP A -> C AC=2;AN=168;BQB=0.793627;DP=2557;DP4=1191,1144,22,17;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00156433;MQB=2.79728e-12;MQSB=1.19112e-12;RPB=0.649231;SGB=-6.32537;VDB=0.202161;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.3:13565552 chr03:013565552 0 W/13565552-13565552 FN433-S Single Base Substitution A-C INTERGENIC HOMO SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN488-S.SNP.3:13565552 chr03:013565552 0 W/13565552-13565552 FN488-S Single Base Substitution A-C INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2578-S.SNP.3:13587588 chr03:013587588 0 W/13587588-13587588 FN2578-S SNP G -> A AC=1;AN=198;BQB=0.438614;DP=4484;DP4=2474,1785,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.04934e-07;MQSB=0.953343;RPB=0.976319;SGB=-17.4065;VDB=0.824582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P780S|896|LOC_Os03g23950|protein_coding|CODING|LOC_Os03g23950.1|14|1) FN-76.SNP.3:13597665 chr03:013597665 0 W/13597665-13597665 FN-76 Single Base Substitution A-C INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1022-S.SNP.3:13600720 chr03:013600720 0 W/13600720-13600720 FN1022-S Single Base Substitution G-A INTERGENIC HOMO SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3343-S.SNP.3:13616678 chr03:013616678 0 W/13616678-13616678 FN3343-S SNP C -> T AC=2;AN=184;BQB=0.932595;DP=3516;DP4=1741,1619,28,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.6803e-26;MQSB=0.981406;RPB=0.140704;SGB=180.141;VDB=0.791381;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T413|606|LOC_Os03g23990|protein_coding|CODING|LOC_Os03g23990.1|3|1) FN4116-S.SNP.3:13620744 chr03:013620744 0 W/13620744-13620744 FN4116-S SNP C -> G AC=2;AN=182;BQB=0.999481;DP=3201;DP4=1566,1546,22,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.52483e-24;MQSB=0.983258;RPB=0.874346;SGB=170.415;VDB=0.912585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G482A|565|LOC_Os03g24010|protein_coding|CODING|LOC_Os03g24010.1|7|1) FN3475-S.SNP.3:13621292 chr03:013621292 0 W/13621292-13621292 FN3475-S SNP C -> T AC=1;AN=184;BQB=0.983865;DP=3502;DP4=1764,1648,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.78227e-14;MQSB=0.899728;RPB=0.906235;SGB=70.9657;VDB=0.693044;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L381|565|LOC_Os03g24010|protein_coding|CODING|LOC_Os03g24010.1|5|1) FN3548-S.SNP.3:13629128 chr03:013629128 0 W/13629128-13629128 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.960415;DP=2454;DP4=1211,1179,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.5138e-06;MQSB=0.985881;RPB=0.0359579;SGB=35.3493;VDB=0.362243;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P53L|226|LOC_Os03g24020|protein_coding|CODING|LOC_Os03g24020.1|2|1) FN4116-S.SNP.3:13630457 chr03:013630457 0 W/13630457-13630457 FN4116-S SNP G -> A AC=2;AN=182;BQB=0.784123;DP=3266;DP4=1364,1493,12,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.01215e-11;MQSB=0.94151;RPB=0.234205;SGB=-41.7308;VDB=0.338659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.3:13633165 chr03:013633165 0 W/13633165-13633165 FN3411-S SNP A -> T AC=1;AN=184;BQB=0.952862;DP=2785;DP4=1535,1165,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.16759e-07;MQSB=0.959296;RPB=0.888837;SGB=39.699;VDB=0.897593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.3:13633166 chr03:013633166 0 W/13633166-13633166 FN3411-S SNP C -> T AC=1;AN=184;BQB=0.962666;DP=2802;DP4=1552,1170,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57618e-07;MQSB=0.978163;RPB=0.930548;SGB=44.2207;VDB=0.796373;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.3:13638670 chr03:013638670 0 W/13638670-13638670 W246-5-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.3:13638671 chr03:013638671 0 W/13638671-13638671 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2750-S.SNP.3:13638700 chr03:013638700 0 W/13638700-13638700 FN2750-S SNP C -> T AC=1;AN=200;BQB=0.707276;DP=4738;DP4=2121,2395,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28284e-09;MQSB=0.936591;RPB=0.998759;SGB=69.1109;VDB=0.0788007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.3:13639236 chr03:013639236 0 W/13639236-13639236 FN3943-S SNP A -> T AC=2;AN=168;BQB=0.6846;DP=2541;DP4=1158,1023,18,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4693e-11;MQSB=0.435033;RPB=0.790763;SGB=-158.61;VDB=0.522918;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.3:13671301 chr03:013671301 0 W/13671301-13671301 FN3666-S SNP C -> G AC=1;AN=190;BQB=0.655267;DP=2501;DP4=1328,1062,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02825e-06;MQSB=0.830629;RPB=0.876405;SGB=32.5467;VDB=0.377547;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.3:13676058 chr03:013676058 0 W/13676058-13676058 FN1570-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g24090 expressed protein SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2739-S.SNP.3:13677802 chr03:013677802 0 W/13677802-13677802 FN2739-S SNP A -> G AC=1;AN=200;BQB=0.846089;DP=5346;DP4=2520,2562,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16846e-12;MQSB=0.704497;RPB=0.763692;SGB=12.7003;VDB=0.477669;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.3:13680781 chr03:013680781 0 W/13680781-13680781 FN4125-S SNP T -> A AC=1;AN=182;BQB=0.884169;DP=3132;DP4=1534,1489,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.88954e-05;MQSB=0.996929;RPB=0.53193;SGB=13.1007;VDB=0.0239935;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.3:13680782 chr03:013680782 0 W/13680782-13680782 FN3520-S SNP A -> T AC=1;AN=188;BQB=0.996106;DP=3353;DP4=1525,1722,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00029824;MQB=3.59564e-10;MQSB=0.975841;RPB=0.978295;SGB=11.7114;VDB=0.25676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.3:13685441 chr03:013685441 0 W/13685441-13685441 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.999428;DP=3567;DP4=1810,1645,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0053266;MQB=0.191481;MQSB=1.37635e-06;RPB=0.461189;SGB=57.786;VDB=0.346151;EFF=INTRON(MODIFIER||||1977|LOC_Os03g24110|protein_coding|CODING|LOC_Os03g24110.1|1|1) FN2439.SNP.3:13689276 chr03:013689276 0 W/13689276-13689276 FN2439 SNP T -> A AC=1;AN=200;BQB=0.00439208;DP=3317;DP4=1434,1383,4,11;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.203497;MQB=0.932645;MQSB=0;RPB=0.599797;SGB=-34.5259;VDB=0.0822528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L1182Q|1977|LOC_Os03g24110|protein_coding|CODING|LOC_Os03g24110.1|3|1) FN2646-S.SNP.3:13691416 chr03:013691416 0 W/13691416-13691416 FN2646-S SNP A -> G AC=1;AN=200;BQB=0.998989;DP=5883;DP4=2625,2762,10,15;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.157233;MQB=0.989005;MQSB=0.0256107;RPB=0.651751;SGB=-8.87404;VDB=0.911803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D1874G|1977|LOC_Os03g24110|protein_coding|CODING|LOC_Os03g24110.1|4|1) FN3964-S.SNP.3:13697161 chr03:013697161 0 W/13697161-13697161 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.772709;DP=2486;DP4=1283,1114,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.000402253;MQB=0.127038;MQSB=0.00137734;RPB=0.0755991;SGB=55.3328;VDB=0.0386992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.3:13701056 chr03:013701056 0 W/13701056-13701056 FN2596-S SNP C -> G AC=1;AN=198;BQB=0.984263;DP=3362;DP4=1408,1761,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.63679e-09;MQSB=0.952777;RPB=0.98623;SGB=47.3393;VDB=0.543287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V33L|147|LOC_Os03g24130|protein_coding|CODING|LOC_Os03g24130.1|1|1) FN3982-S.SNP.3:13710362 chr03:013710362 0 W/13710362-13710362 FN3982-S SNP T -> C AC=2;AN=168;BQB=0.926075;DP=2680;DP4=1064,1472,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.02842e-12;MQSB=0.813743;RPB=0.873323;SGB=96.481;VDB=0.452072;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.3:13712745 chr03:013712745 0 W/13712745-13712745 FN-94 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2640-S.SNP.3:13731217 chr03:013731217 0 W/13731217-13731217 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.926937;DP=5048;DP4=2392,2410,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53553e-14;MQSB=0.591282;RPB=0.522671;SGB=55.5366;VDB=0.485571;EFF=INTRON(MODIFIER||||874|LOC_Os03g24180|protein_coding|CODING|LOC_Os03g24180.1|14|1) FN4041-S.SNP.3:13743458 chr03:013743458 0 W/13743458-13743458 FN4041-S SNP C -> A AC=2;AN=168;BQB=0.999993;DP=2705;DP4=1353,1169,16,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.81988e-13;MQSB=0.977745;RPB=0.587624;SGB=75.9177;VDB=0.582064;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.3:13752527 chr03:013752527 0 W/13752527-13752527 FN920-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g24190 retrotransposon protein, putative, unclassified, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3780-S.SNP.3:13758292 chr03:013758292 0 W/13758292-13758292 FN3780-S SNP C -> A AC=1;AN=190;BQB=0.975079;DP=2790;DP4=1260,1442,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0150538;MQB=0.960395;MQSB=0.495298;RPB=0.269108;SGB=32.5467;VDB=0.0675486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C516F|1705|LOC_Os03g24190|protein_coding|CODING|LOC_Os03g24190.1|2|1) FN2646-S.SNP.3:13759899 chr03:013759899 0 W/13759899-13759899 FN2646-S SNP G -> C AC=1;AN=200;BQB=0.540867;DP=4774;DP4=2238,2313,15,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00418936;MQB=2.1312e-07;MQSB=0.942959;RPB=0.887301;SGB=95.7111;VDB=0.587906;EFF=INTRON(MODIFIER||||1705|LOC_Os03g24190|protein_coding|CODING|LOC_Os03g24190.1|1|1) FN465-S.SNP.3:13761831 chr03:013761831 0 W/13761831-13761831 FN465-S Single Base Substitution C-G INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1573-S.SNP.3:13765114 chr03:013765114 0 W/13765114-13765114 FN1573-S Single Base Substitution C-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2327.SNP.3:13766422 chr03:013766422 0 W/13766422-13766422 FN2327 SNP T -> C AC=1;AN=192;BQB=0.995779;DP=3772;DP4=1273,1835,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.32935e-07;MQSB=0.414251;RPB=0.327332;SGB=-117.619;VDB=0.587359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I20T|139|LOC_Os03g24210|protein_coding|CODING|LOC_Os03g24210.1|1|1) FN499-S.SNP.3:13770164 chr03:013770164 0 W/13770164-13770164 FN499-S Single Base Substitution G-A INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1273-S.SNP.3:13778519 chr03:013778519 0 W/13778519-13778519 FN1273-S Single Base Substitution C-A SPLICE_SITE_REGION HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN3746-S.SNP.3:13778570 chr03:013778570 0 W/13778570-13778570 FN3746-S SNP A -> G AC=2;AN=190;BQB=0.90299;DP=2651;DP4=1360,1190,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.71026e-12;MQSB=0.987298;RPB=0.746009;SGB=90.0802;VDB=0.404131;EFF=INTRON(MODIFIER||||636|LOC_Os03g24220|protein_coding|CODING|LOC_Os03g24220.1|2|1),INTRON(MODIFIER||||636|LOC_Os03g24220|protein_coding|CODING|LOC_Os03g24220.2|2|1) FN3570-S.SNP.3:13788612 chr03:013788612 0 W/13788612-13788612 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.963242;DP=2944;DP4=1448,1414,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.34612e-06;MQSB=0.995145;RPB=0.921544;SGB=28.9929;VDB=0.855713;EFF=UTR_3_PRIME(MODIFIER||3932||636|LOC_Os03g24220|protein_coding|CODING|LOC_Os03g24220.1|23|1),UTR_3_PRIME(MODIFIER||3932||636|LOC_Os03g24220|protein_coding|CODING|LOC_Os03g24220.2|23|1) FN1416-S.SNP.3:13808699 chr03:013808699 0 W/13808699-13808699 FN1416-S Single Base Substitution T-A INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1573-S.SNP.3:13809368 chr03:013809368 0 W/13809368-13809368 FN1573-S Single Base Substitution G-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2554-S.SNP.3:13809606 chr03:013809606 0 W/13809606-13809606 FN2554-S SNP T -> G AC=1;AN=198;BQB=0.933836;DP=3237;DP4=1638,1342,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.75353e-10;MQSB=0.860475;RPB=0.868749;SGB=61.7198;VDB=0.941931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.3:13809827 chr03:013809827 0 W/13809827-13809827 FN1477-S Single Base Substitution T-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN1501-S.SNP.3:13816384 chr03:013816384 0 W/13816384-13816384 FN1501-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2188-S.SNP.3:13816384 chr03:013816384 0 W/13816384-13816384 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.84475;DP=3706;DP4=2028,1235,74,25;HOB=5.54017e-05;ICB=0.000111386;MQ=15;MQ0F=0.354021;MQB=7.0793e-05;MQSB=2.79122e-06;RPB=2.80281e-06;SGB=-1420.36;VDB=0.192926;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G80|2027|LOC_Os03g24270|protein_coding|CODING|LOC_Os03g24270.1|1|1) FN3372-S.SNP.3:13816384 chr03:013816384 0 W/13816384-13816384 FN3372-S SNP C -> T AC=2;AN=184;BQB=0.576365;DP=3960;DP4=2034,1665,133,35;HOB=0.0215028;ICB=0.494625;MQ=17;MQ0F=0.458586;MQB=1.12263e-19;MQSB=0;RPB=1.03768e-29;SGB=-2557.45;VDB=2.53555e-06;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G80|2027|LOC_Os03g24270|protein_coding|CODING|LOC_Os03g24270.1|1|1) FN4046-S.SNP.3:13816384 chr03:013816384 0 W/13816384-13816384 FN4046-S SNP C -> T AC=2;AN=168;BQB=0.980911;DP=2629;DP4=1308,1124,100,15;HOB=0.0235261;ICB=0.494119;MQ=18;MQ0F=0.429441;MQB=3.45054e-16;MQSB=0;RPB=3.93733e-22;SGB=-1381.61;VDB=3.52042e-06;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G80|2027|LOC_Os03g24270|protein_coding|CODING|LOC_Os03g24270.1|1|1) FN956-S.SNP.3:13816384 chr03:013816384 0 W/13816384-13816384 FN956-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3427-S.SNP.3:13816681 chr03:013816681 0 W/13816681-13816681 FN3427-S SNP C -> T AC=1;AN=184;BQB=0.26413;DP=4381;DP4=2272,2001,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.0728144;MQB=0.962064;MQSB=0;RPB=0.851363;SGB=78.0093;VDB=0.445467;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N179|2027|LOC_Os03g24270|protein_coding|CODING|LOC_Os03g24270.1|1|1) FN3322-S.SNP.3:13817096 chr03:013817096 0 W/13817096-13817096 FN3322-S SNP G -> A AC=2;AN=184;BQB=0.676212;DP=4475;DP4=2070,2316,9,20;HOB=0.0215028;ICB=0.494625;MQ=19;MQ0F=0.236648;MQB=0.282516;MQSB=0;RPB=0.0368329;SGB=92.0965;VDB=0.113827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G318S|2027|LOC_Os03g24270|protein_coding|CODING|LOC_Os03g24270.1|1|1) FN555-S.SNP.3:13832185 chr03:013832185 0 W/13832185-13832185 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. W472-5-1.SNP.3:13836002 chr03:013836002 0 W/13836002-13836002 W472-5-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3732-S.SNP.3:13837010 chr03:013837010 0 W/13837010-13837010 FN3732-S SNP A -> G AC=1;AN=190;BQB=0.869477;DP=2666;DP4=1275,1254,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.96128e-08;MQSB=0.601573;RPB=0.905619;SGB=15.9981;VDB=0.959618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.3:13837016 chr03:013837016 0 W/13837016-13837016 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.959278;DP=2637;DP4=1346,1190,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.4271e-07;MQSB=0.658169;RPB=0.772014;SGB=25.439;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.3:13849734 chr03:013849734 0 W/13849734-13849734 FN484-S Single Base Substitution G-A INTRON HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2602-S.SNP.3:13850849 chr03:013850849 0 W/13850849-13850849 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.996811;DP=4148;DP4=2067,1880,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00048216;MQB=3.97441e-07;MQSB=0.90949;RPB=0.675407;SGB=29.3637;VDB=0.176923;EFF=INTRON(MODIFIER||||1493|LOC_Os03g24339|protein_coding|CODING|LOC_Os03g24339.1|2|1) FN2364.SNP.3:13853502 chr03:013853502 0 W/13853502-13853502 FN2364 SNP C -> G AC=2;AN=192;BQB=0.0486975;DP=4988;DP4=2519,2165,22,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000200481;MQB=5.04445e-15;MQSB=0.859038;RPB=0.784983;SGB=90.4583;VDB=0.590544;EFF=INTRON(MODIFIER||||1493|LOC_Os03g24339|protein_coding|CODING|LOC_Os03g24339.1|2|1) FN2439.SNP.3:13859160 chr03:013859160 0 W/13859160-13859160 FN2439 SNP A -> T AC=1;AN=200;BQB=0.139146;DP=5108;DP4=2335,2445,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000195771;MQB=2.84897e-06;MQSB=0.964985;RPB=0.796722;SGB=19.0642;VDB=0.907365;EFF=INTRON(MODIFIER||||1493|LOC_Os03g24339|protein_coding|CODING|LOC_Os03g24339.1|1|1) FN2351.SNP.3:13861882 chr03:013861882 0 W/13861882-13861882 FN2351 SNP C -> T AC=2;AN=192;BQB=0.999416;DP=5237;DP4=2311,2545,26,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.47562e-28;MQSB=0.989402;RPB=0.999155;SGB=54.2852;VDB=0.298616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.3:13864560 chr03:013864560 0 W/13864560-13864560 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.411529;DP=3532;DP4=1079,2420,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.43294e-10;MQSB=4.45478e-05;RPB=0.950699;SGB=38.7926;VDB=0.93913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.3:13867939 chr03:013867939 0 W/13867939-13867939 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.912734;DP=6633;DP4=3674,2500,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.284788;MQB=0.229283;MQSB=0;RPB=0.0960431;SGB=64.5316;VDB=0.118067;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F692|2027|LOC_Os03g24360|protein_coding|CODING|LOC_Os03g24360.1|1|1) FN-303.SNP.3:13889151 chr03:013889151 0 W/13889151-13889151 FN-303 Single Base Substitution T-A INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3540-S.SNP.3:13898051 chr03:013898051 0 W/13898051-13898051 FN3540-S SNP C -> T AC=1;AN=188;BQB=0.998237;DP=2579;DP4=1082,1363,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.36939e-10;MQSB=0.996991;RPB=0.968834;SGB=50.1574;VDB=0.0494509;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.3:13904135 chr03:013904135 0 W/13904135-13904135 FN403-S Single Base Substitution T-C INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2108-S.SNP.3:13905602 chr03:013905602 0 W/13905602-13905602 FN2108-S SNP G -> A AC=1;AN=168;BQB=0.947522;DP=3542;DP4=1709,1790,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.75075e-11;MQSB=0.742487;RPB=0.693283;SGB=14.2064;VDB=0.274563;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V298|757|LOC_Os03g24410|protein_coding|CODING|LOC_Os03g24410.1|1|1) FN3824-S.SNP.3:13914461 chr03:013914461 0 W/13914461-13914461 FN3824-S SNP A -> T AC=1;AN=190;BQB=0.708343;DP=2950;DP4=1438,1413,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02244e-07;MQSB=0.974663;RPB=0.715504;SGB=43.2083;VDB=0.189067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.3:13914554 chr03:013914554 0 W/13914554-13914554 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.344317;DP=4914;DP4=2501,2070,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12658e-13;MQSB=0.95673;RPB=0.109921;SGB=-10.4526;VDB=0.00306719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.3:13916470 chr03:013916470 0 W/13916470-13916470 FN3479-S SNP G -> T AC=1;AN=184;BQB=0.921714;DP=4891;DP4=2492,2318,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.75168e-11;MQSB=0.932683;RPB=0.836051;SGB=71.3514;VDB=0.841382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R161L|505|LOC_Os03g24430|protein_coding|CODING|LOC_Os03g24430.1|1|1) FN2412.SNP.3:13917715 chr03:013917715 0 W/13917715-13917715 FN2412 SNP A -> G AC=1;AN=200;BQB=0.110578;DP=4539;DP4=2456,1784,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.87084e-13;MQSB=0.957609;RPB=0.611708;SGB=23.9365;VDB=0.759316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.3:13918601 chr03:013918601 0 W/13918601-13918601 FN3730-S SNP G -> T AC=1;AN=190;BQB=0.858512;DP=3014;DP4=1611,1304,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98836e-12;MQSB=0.959134;RPB=0.889515;SGB=80.9724;VDB=0.802021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.3:13938504 chr03:013938504 0 W/13938504-13938504 FN1668-S SNP A -> G AC=2;AN=188;BQB=0.74412;DP=2923;DP4=1830,1028,31,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.71057e-26;MQSB=0.852484;RPB=0.583087;SGB=146.475;VDB=0.869071;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.3:13938734 chr03:013938734 0 W/13938734-13938734 FN-176 Single Base Substitution G-A INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN479-S.SNP.3:13940743 chr03:013940743 0 W/13940743-13940743 FN479-S Single Base Substitution G-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. W416-6-1.SNP.3:13946496 chr03:013946496 0 W/13946496-13946496 W416-6-1 Single Base Substitution T-A INTRON HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2216-S.SNP.3:13949605 chr03:013949605 0 W/13949605-13949605 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.931114;DP=5042;DP4=2223,2330,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.85111e-08;MQSB=0.843467;RPB=0.362912;SGB=7.21887;VDB=0.778584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.3:13951487 chr03:013951487 0 W/13951487-13951487 FN-363 Single Base Substitution G-A INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN3345-S.SNP.3:13952483 chr03:013952483 0 W/13952483-13952483 FN3345-S SNP T -> C AC=1;AN=184;BQB=0.996225;DP=2920;DP4=1395,1407,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.89372e-10;MQSB=0.89963;RPB=0.867137;SGB=71.3514;VDB=0.00689355;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.3:13953307 chr03:013953307 0 W/13953307-13953307 FN-353 Single Base Substitution T-C INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2667-S.SNP.3:13956805 chr03:013956805 0 W/13956805-13956805 FN2667-S SNP A -> G AC=1;AN=200;BQB=0.364461;DP=5504;DP4=2682,2433,10,11;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.112282;MQB=0.994254;MQSB=2.34545e-26;RPB=0.75624;SGB=65.5058;VDB=0.189449;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N1796|1973|LOC_Os03g24490|protein_coding|CODING|LOC_Os03g24490.1|6|1) FN1423-S.SNP.3:13962190 chr03:013962190 0 W/13962190-13962190 FN1423-S Single Base Substitution G-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2666-S.SNP.3:13966957 chr03:013966957 0 W/13966957-13966957 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.379995;DP=5064;DP4=2313,2365,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56463e-06;MQSB=0.867762;RPB=0.0997973;SGB=26.8797;VDB=0.201643;EFF=INTRON(MODIFIER||||18|LOC_Os03g24500|protein_coding|CODING|LOC_Os03g24500.1|1|1) FN1003-S.SNP.3:13971504 chr03:013971504 0 W/13971504-13971504 FN1003-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN4140-S.SNP.3:13971504 chr03:013971504 0 W/13971504-13971504 FN4140-S SNP A -> T AC=1;AN=170;BQB=0.96936;DP=3141;DP4=1328,1715,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.28103e-09;MQSB=0.977126;RPB=0.991461;SGB=38.3207;VDB=0.738512;EFF=UTR_3_PRIME(MODIFIER||83||347|LOC_Os03g24510|protein_coding|CODING|LOC_Os03g24510.1|1|1) FN666-S.SNP.3:13971887 chr03:013971887 0 W/13971887-13971887 FN666-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN765-S.SNP.3:13976582 chr03:013976582 0 W/13976582-13976582 FN765-S Single Base Substitution G-C INTRON HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN4152-S.SNP.3:13985699 chr03:013985699 0 W/13985699-13985699 FN4152-S SNP T -> C AC=1;AN=170;BQB=0.997128;DP=2480;DP4=1306,1100,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.45719e-12;MQSB=0.935358;RPB=0.997483;SGB=87.856;VDB=0.988285;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.3:13986414 chr03:013986414 0 W/13986414-13986414 FN-329 Single Base Substitution G-C INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-261.SNP.3:13998840 chr03:013998840 0 W/13998840-13998840 FN-261 Single Base Substitution G-A INTERGENIC HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN2788-S.SNP.3:14002053 chr03:014002053 0 W/14002053-14002053 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.728868;DP=3885;DP4=1884,1777,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.68654e-16;MQSB=0.576545;RPB=0.277843;SGB=109.285;VDB=0.96521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W158L|178|LOC_Os03g24580|protein_coding|CODING|LOC_Os03g24580.1|5|1),UTR_3_PRIME(MODIFIER||98||151|LOC_Os03g24580|protein_coding|CODING|LOC_Os03g24580.2|4|1) FN-166.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN-166 Single Base Substitution T-C INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1630-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3390-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN3390-S SNP T -> C AC=1;AN=184;BQB=0.975827;DP=2914;DP4=1270,1547,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01814e-06;MQSB=0.934656;RPB=0.758771;SGB=39.699;VDB=0.627244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN3417-S SNP T -> C AC=2;AN=184;BQB=0.999976;DP=2808;DP4=1122,1597,11,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.01438e-15;MQSB=0.965762;RPB=0.667636;SGB=116.569;VDB=0.276897;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN3780-S SNP T -> C AC=1;AN=190;BQB=0.968874;DP=2717;DP4=1127,1491,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15803e-08;MQSB=0.923644;RPB=0.980895;SGB=49.0954;VDB=0.961624;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN4078-S SNP T -> C AC=2;AN=182;BQB=0.895603;DP=3072;DP4=1299,1675,14,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.92781e-15;MQSB=0.973349;RPB=0.568022;SGB=111.774;VDB=0.172758;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.3:14005514 chr03:014005514 0 W/14005514-14005514 FN795-S Single Base Substitution T-C INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN477-S.SNP.3:14007032 chr03:014007032 0 W/14007032-14007032 FN477-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3411-S.SNP.3:14012433 chr03:014012433 0 W/14012433-14012433 FN3411-S SNP T -> G AC=1;AN=184;BQB=0.367356;DP=2888;DP4=1396,1411,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00134789;MQSB=0.900363;RPB=0.915477;SGB=25.1826;VDB=0.294276;EFF=INTRON(MODIFIER||||136|LOC_Os03g24600|protein_coding|CODING|LOC_Os03g24600.1|1|1) FN4167-S.SNP.3:14013472 chr03:014013472 0 W/14013472-14013472 FN4167-S SNP T -> C AC=2;AN=170;BQB=0.993687;DP=2749;DP4=1536,1102,19,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.75333e-15;MQSB=0.86775;RPB=0.771219;SGB=118.955;VDB=0.196725;EFF=INTRON(MODIFIER||||136|LOC_Os03g24600|protein_coding|CODING|LOC_Os03g24600.1|2|1) FN2611-S.SNP.3:14019735 chr03:014019735 0 W/14019735-14019735 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.676362;DP=4619;DP4=2113,2239,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.01193e-17;MQSB=0.919146;RPB=0.949655;SGB=118.737;VDB=0.63972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A79V|1180|LOC_Os03g24620|protein_coding|CODING|LOC_Os03g24620.1|1|1) FN2673-S.SNP.3:14022876 chr03:014022876 0 W/14022876-14022876 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.813084;DP=5329;DP4=2551,2544,19,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.74149e-18;MQSB=0.924154;RPB=0.213648;SGB=112.373;VDB=0.399331;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L786S|1180|LOC_Os03g24620|protein_coding|CODING|LOC_Os03g24620.1|3|1) FN2334.SNP.3:14023957 chr03:014023957 0 W/14023957-14023957 FN2334 SNP C -> G AC=2;AN=192;BQB=0.998824;DP=4747;DP4=2515,1999,18,11;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000421319;MQB=1.382e-10;MQSB=0.929441;RPB=0.754311;SGB=93.2452;VDB=0.565824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L1067V|1180|LOC_Os03g24620|protein_coding|CODING|LOC_Os03g24620.1|4|1) FN2533-S.SNP.3:14027186 chr03:014027186 0 W/14027186-14027186 FN2533-S SNP C -> A AC=2;AN=198;BQB=0.839991;DP=3836;DP4=1950,1711,14,12;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0396246;MQB=4.47792e-05;MQSB=0.421724;RPB=0.746854;SGB=52.7004;VDB=0.0856422;EFF=INTRON(MODIFIER||||417|LOC_Os03g24630|protein_coding|CODING|LOC_Os03g24630.1|7|1) FN2533-S.SNP.3:14027188 chr03:014027188 0 W/14027188-14027188 FN2533-S SNP T -> C AC=2;AN=198;BQB=0.613295;DP=3835;DP4=1906,1586,15,14;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0411995;MQB=0.000427881;MQSB=0.0454355;RPB=0.912217;SGB=-6.69434;VDB=0.476941;EFF=INTRON(MODIFIER||||417|LOC_Os03g24630|protein_coding|CODING|LOC_Os03g24630.1|7|1) FN_N1-116-1.SNP.3:14027488 chr03:014027488 0 W/14027488-14027488 FN_N1-116-1 Single Base Substitution G-A Homo LOC_Os03g24630 hypothetical protein SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2192-S.SNP.3:14029113 chr03:014029113 0 W/14029113-14029113 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.943519;DP=2928;DP4=1284,1346,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00273224;MQB=0.000289831;MQSB=0.528914;RPB=0.762518;SGB=30.8803;VDB=0.691871;EFF=INTRON(MODIFIER||||417|LOC_Os03g24630|protein_coding|CODING|LOC_Os03g24630.1|1|1) FN2192-S.SNP.3:14029114 chr03:014029114 0 W/14029114-14029114 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.99873;DP=2923;DP4=1297,1310,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00273691;MQB=0.00043738;MQSB=0.883407;RPB=0.714609;SGB=18.3316;VDB=0.773897;EFF=INTRON(MODIFIER||||417|LOC_Os03g24630|protein_coding|CODING|LOC_Os03g24630.1|1|1) FN3436-S.SNP.3:14047935 chr03:014047935 0 W/14047935-14047935 FN3436-S SNP G -> A AC=1;AN=184;BQB=0.996781;DP=2920;DP4=1552,1219,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.78251e-08;MQSB=0.912536;RPB=0.680245;SGB=39.2697;VDB=0.103932;EFF=INTERGENIC(MODIFIER||||||||||1) FN660-S.SNP.3:14051155 chr03:014051155 0 W/14051155-14051155 FN660-S Single Base Substitution C-T INTERGENIC HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN660-S.SNP.3:14051156 chr03:014051156 0 W/14051156-14051156 FN660-S Single Base Substitution C-T INTERGENIC HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1646-S.SNP.3:14053017 chr03:014053017 0 W/14053017-14053017 FN1646-S Single Base Substitution C-T INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1736-S.SNP.3:14053017 chr03:014053017 0 W/14053017-14053017 FN1736-S SNP C -> T AC=2;AN=188;BQB=0.99887;DP=4037;DP4=1975,1965,25,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.49621e-22;MQSB=0.903592;RPB=0.957416;SGB=0.755789;VDB=0.543477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.3:14053017 chr03:014053017 0 W/14053017-14053017 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.0651353;DP=2715;DP4=1498,1120,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.55805e-06;MQSB=0.986174;RPB=0.625742;SGB=20.9896;VDB=0.643015;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.3:14053017 chr03:014053017 0 W/14053017-14053017 FN4138-S SNP C -> T AC=1;AN=170;BQB=0.947666;DP=2246;DP4=1306,843,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.27422e-07;MQSB=0.99223;RPB=0.399233;SGB=43.4296;VDB=0.593059;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.3:14056071 chr03:014056071 0 W/14056071-14056071 FN654-S Single Base Substitution T-C INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3613-S.SNP.3:14056259 chr03:014056259 0 W/14056259-14056259 FN3613-S SNP A -> G AC=1;AN=190;BQB=0.855185;DP=2844;DP4=1422,1308,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79281e-12;MQSB=0.950742;RPB=0.952251;SGB=57.4238;VDB=0.0576455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.3:14060000 chr03:014060000 0 W/14060000-14060000 FN1307-S Single Base Substitution A-T INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2709-S.SNP.3:14063611 chr03:014063611 0 W/14063611-14063611 FN2709-S SNP A -> G AC=1;AN=200;BQB=0.0237064;DP=5032;DP4=1975,2793,12,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.36653e-19;MQSB=0.999434;RPB=0.670332;SGB=-83.4175;VDB=0.793569;EFF=INTRON(MODIFIER||||563|LOC_Os03g24680|protein_coding|CODING|LOC_Os03g24680.1|3|1) FN2497.SNP.3:14073576 chr03:014073576 0 W/14073576-14073576 FN2497 SNP G -> A AC=1;AN=200;BQB=0.883011;DP=4804;DP4=2249,2249,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020816;MQB=5.73874e-08;MQSB=0.999845;RPB=0.999959;SGB=16.4591;VDB=0.162982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.3:14080547 chr03:014080547 0 W/14080547-14080547 FN3531-S SNP C -> A AC=1;AN=188;BQB=0.822368;DP=3594;DP4=1157,2207,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.88889e-06;MQSB=0.898573;RPB=0.575848;SGB=2.45162;VDB=0.814914;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.3:14085980 chr03:014085980 0 W/14085980-14085980 FN3695-S SNP A -> G AC=2;AN=190;BQB=0.988232;DP=1834;DP4=1290,453,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.56387e-14;MQSB=0.00646122;RPB=0.662168;SGB=130.46;VDB=0.661681;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.3:14090917 chr03:014090917 0 W/14090917-14090917 FN4271-S SNP G -> C AC=1;AN=170;BQB=0.945405;DP=2124;DP4=816,1234,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.08732e-08;MQSB=0.994234;RPB=0.124922;SGB=61.2001;VDB=0.342358;EFF=INTRON(MODIFIER||||190|LOC_Os03g24720|protein_coding|CODING|LOC_Os03g24720.1|1|1) FN2681-S.SNP.3:14093618 chr03:014093618 0 W/14093618-14093618 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.664444;DP=5051;DP4=2402,2266,22,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18688e-19;MQSB=0.95772;RPB=0.606073;SGB=33.5675;VDB=0.228034;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.3:14094468 chr03:014094468 0 W/14094468-14094468 FN347-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1546-S.SNP.3:14094618 chr03:014094618 0 W/14094618-14094618 FN1546-S Single Base Substitution G-T START_GAINED HET LOC_Os03g24730 expressed protein SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN2290.SNP.3:14098540 chr03:014098540 0 W/14098540-14098540 FN2290 SNP A -> T AC=1;AN=192;BQB=0.996366;DP=4779;DP4=2019,2319,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.35944e-13;MQSB=0.950916;RPB=0.169759;SGB=86.1165;VDB=0.0463279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.3:14098540 chr03:014098540 0 W/14098540-14098540 FN3489-S SNP A -> T AC=1;AN=184;BQB=0.992338;DP=3413;DP4=1355,1882,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.24718e-11;MQSB=0.308207;RPB=0.938321;SGB=-13.1487;VDB=0.315921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.3:14098540 chr03:014098540 0 W/14098540-14098540 FN3833-S SNP A -> T AC=1;AN=190;BQB=0.852684;DP=3273;DP4=1310,1807,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.43743e-06;MQSB=0.507439;RPB=0.966541;SGB=23.6597;VDB=0.277613;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.3:14101827 chr03:014101827 0 W/14101827-14101827 FN886-S Single Base Substitution T-C INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1615-S.SNP.3:14104830 chr03:014104830 0 W/14104830-14104830 FN1615-S Single Base Substitution T-G INTERGENIC Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN956-S.SNP.3:14108697 chr03:014108697 0 W/14108697-14108697 FN956-S Single Base Substitution T-C INTRON HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2499.SNP.3:14114454 chr03:014114454 0 W/14114454-14114454 FN2499 SNP C -> G AC=2;AN=200;BQB=0.917913;DP=5195;DP4=2465,2383,15,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.52312e-19;MQSB=0.52762;RPB=0.768966;SGB=41.5933;VDB=0.641938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.3:14114749 chr03:014114749 0 W/14114749-14114749 FN2242-S SNP T -> C AC=2;AN=190;BQB=0.180846;DP=5363;DP4=2436,2616,31,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.47888e-21;MQSB=0.658838;RPB=0.999995;SGB=56.9429;VDB=0.74687;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.3:14116335 chr03:014116335 0 W/14116335-14116335 FN1283-S Single Base Substitution G-A INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1119-S.SNP.3:14117487 chr03:014117487 0 W/14117487-14117487 FN1119-S Single Base Substitution G-A INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1516-S.SNP.3:14119638 chr03:014119638 0 W/14119638-14119638 FN1516-S Single Base Substitution C-A INTRON Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3393-S.SNP.3:14119866 chr03:014119866 0 W/14119866-14119866 FN3393-S SNP T -> C AC=1;AN=184;BQB=0.597034;DP=4141;DP4=2258,1698,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26921e-08;MQSB=0.997698;RPB=0.997114;SGB=38.4058;VDB=0.648302;EFF=INTRON(MODIFIER||||132|LOC_Os03g24770|protein_coding|CODING|LOC_Os03g24770.1|1|1) FN420-S.SNP.3:14120456 chr03:014120456 0 W/14120456-14120456 FN420-S Single Base Substitution T-G INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2266-S.SNP.3:14121329 chr03:014121329 0 W/14121329-14121329 FN2266-S SNP T -> C AC=1;AN=190;BQB=0.45991;DP=4790;DP4=2236,2073,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56065e-06;MQSB=0.0427426;RPB=0.95365;SGB=-16.5452;VDB=0.516627;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.3:14126628 chr03:014126628 0 W/14126628-14126628 FN-210 Single Base Substitution A-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN2237-S.SNP.3:14126949 chr03:014126949 0 W/14126949-14126949 FN2237-S SNP G -> A AC=2;AN=190;BQB=0.653506;DP=5359;DP4=2691,2166,28,19;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00130621;MQB=2.78977e-11;MQSB=2.27696e-09;RPB=0.000398098;SGB=2.28657;VDB=0.0850919;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E96K|522|LOC_Os03g24790|protein_coding|CODING|LOC_Os03g24790.1|1|1) FN1559-S.SNP.3:14127239 chr03:014127239 0 W/14127239-14127239 FN1559-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1071-S.SNP.3:14130071 chr03:014130071 0 W/14130071-14130071 FN1071-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g24800 retrotransposon protein, putative, unclassified, expressed SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1108-S.SNP.3:14136193 chr03:014136193 0 W/14136193-14136193 FN1108-S Single Base Substitution A-G INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3514-S.SNP.3:14139890 chr03:014139890 0 W/14139890-14139890 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.824761;DP=2714;DP4=1280,1370,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.35726e-05;MQSB=0.923465;RPB=0.9967;SGB=48.979;VDB=0.72942;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.3:14140204 chr03:014140204 0 W/14140204-14140204 FN1069-S Single Base Substitution G-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2600-S.SNP.3:14143409 chr03:014143409 0 W/14143409-14143409 FN2600-S SNP G -> T AC=1;AN=198;BQB=0.937011;DP=4514;DP4=2081,2121,19,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.53784e-17;MQSB=0.989399;RPB=0.91002;SGB=65.676;VDB=0.630998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.3:14143433 chr03:014143433 0 W/14143433-14143433 FN3860-S SNP G -> A AC=1;AN=158;BQB=0.959605;DP=2141;DP4=1034,1021,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.80807e-08;MQSB=0.957831;RPB=0.953524;SGB=47.0672;VDB=0.457614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.3:14144452 chr03:014144452 0 W/14144452-14144452 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.442681;DP=3563;DP4=1757,1526,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.21448e-08;MQSB=0.333046;RPB=0.950431;SGB=38.983;VDB=0.927612;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S155F|850|LOC_Os03g24820|protein_coding|CODING|LOC_Os03g24820.1|1|1) FN2418.SNP.3:14148293 chr03:014148293 0 W/14148293-14148293 FN2418 SNP A -> T AC=1;AN=200;BQB=0.937692;DP=4086;DP4=1648,1866,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.91913e-09;MQSB=0.81563;RPB=0.950616;SGB=68.0801;VDB=0.915758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T178S|372|LOC_Os03g24830|protein_coding|CODING|LOC_Os03g24830.1|1|1) FN1462-S.SNP.3:14150061 chr03:014150061 0 W/14150061-14150061 FN1462-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1462-S.SNP.3:14150062 chr03:014150062 0 W/14150062-14150062 FN1462-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN952-S.SNP.3:14153067 chr03:014153067 0 W/14153067-14153067 FN952-S Single Base Substitution A-C INTRON HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN501-S.SNP.3:14158330 chr03:014158330 0 W/14158330-14158330 FN501-S Single Base Substitution T-A INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN3848-S.SNP.3:14158614 chr03:014158614 0 W/14158614-14158614 FN3848-S SNP A -> T AC=2;AN=158;BQB=0.387493;DP=2719;DP4=1141,1372,13,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.39811e-18;MQSB=0.186453;RPB=0.767481;SGB=91.3541;VDB=0.351081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F131I|533|LOC_Os03g24860|protein_coding|CODING|LOC_Os03g24860.1|2|1) FN776-S.SNP.3:14166547 chr03:014166547 0 W/14166547-14166547 FN776-S Single Base Substitution C-A INTRON HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN-99.SNP.3:14174223 chr03:014174223 0 W/14174223-14174223 FN-99 Single Base Substitution C-T INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2204-S.SNP.3:14176823 chr03:014176823 0 W/14176823-14176823 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.649126;DP=4986;DP4=2490,2084,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200562;MQB=1.93087e-12;MQSB=0.887628;RPB=0.994529;SGB=19.6499;VDB=0.272871;EFF=INTRON(MODIFIER||||243|LOC_Os03g24890|protein_coding|CODING|LOC_Os03g24890.1|1|1),INTRON(MODIFIER||||238|LOC_Os03g24890|protein_coding|CODING|LOC_Os03g24890.2|1|1) FN409-S.SNP.3:14182652 chr03:014182652 0 W/14182652-14182652 FN409-S Single Base Substitution A-C INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2452.SNP.3:14189685 chr03:014189685 0 W/14189685-14189685 FN2452 SNP C -> T AC=1;AN=200;BQB=0.39832;DP=4358;DP4=2376,1767,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000458926;MQB=1.48354e-08;MQSB=0.998744;RPB=0.853369;SGB=63.4749;VDB=0.87221;EFF=INTRON(MODIFIER||||337|LOC_Os03g24910|protein_coding|CODING|LOC_Os03g24910.1|5|1) FN1571-S.SNP.3:14189801 chr03:014189801 0 W/14189801-14189801 FN1571-S Single Base Substitution G-A INTRON HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1646-S.SNP.3:14199040 chr03:014199040 0 W/14199040-14199040 FN1646-S Single Base Substitution G-A INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN-178.SNP.3:14201258 chr03:014201258 0 W/14201258-14201258 FN-178 Single Base Substitution C-T INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1136-19-S.SNP.3:14210824 chr03:014210824 0 W/14210824-14210824 FN1136-19-S Single Base Substitution T-A INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3806-S.SNP.3:14211679 chr03:014211679 0 W/14211679-14211679 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.952962;DP=3231;DP4=1425,1680,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.35067e-09;MQSB=0.897666;RPB=0.990997;SGB=26.2136;VDB=0.73702;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.3:14215063 chr03:014215063 0 W/14215063-14215063 FN451-S Single Base Substitution G-T INTRON HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN451-S.SNP.3:14215064 chr03:014215064 0 W/14215064-14215064 FN451-S Single Base Substitution A-T INTRON HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3494-S.SNP.3:14217254 chr03:014217254 0 W/14217254-14217254 FN3494-S SNP G -> T AC=2;AN=184;BQB=0.199742;DP=2763;DP4=1329,1358,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.32908e-11;MQSB=0.991307;RPB=0.225375;SGB=121.091;VDB=0.68378;EFF=INTRON(MODIFIER||||503|LOC_Os03g24940|protein_coding|CODING|LOC_Os03g24940.1|4|1),INTRON(MODIFIER||||503|LOC_Os03g24940|protein_coding|CODING|LOC_Os03g24940.2|4|1) FN3105-S.SNP.3:14219913 chr03:014219913 0 W/14219913-14219913 FN3105-S SNP T -> A AC=1;AN=184;BQB=0.901378;DP=2681;DP4=1432,1110,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88443e-08;MQSB=0.99998;RPB=0.138593;SGB=0.715177;VDB=0.339188;EFF=INTRON(MODIFIER||||503|LOC_Os03g24940|protein_coding|CODING|LOC_Os03g24940.1|1|1),INTRON(MODIFIER||||503|LOC_Os03g24940|protein_coding|CODING|LOC_Os03g24940.2|1|1) FN4114-S.SNP.3:14223187 chr03:014223187 0 W/14223187-14223187 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.94829;DP=2959;DP4=1504,1370,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.98403e-10;MQSB=0.973213;RPB=0.801252;SGB=42.6494;VDB=0.874197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.3:14224218 chr03:014224218 0 W/14224218-14224218 FN2424 SNP C -> T AC=1;AN=200;BQB=0.341982;DP=4815;DP4=2567,2023,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.99006e-07;MQSB=0.866059;RPB=0.991002;SGB=-0.141083;VDB=0.872139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.3:14230405 chr03:014230405 0 W/14230405-14230405 FN2354 SNP G -> C AC=1;AN=192;BQB=0.90472;DP=5009;DP4=1985,2648,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28131e-09;MQSB=0.605703;RPB=0.4946;SGB=4.22611;VDB=0.913686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.3:14230666 chr03:014230666 0 W/14230666-14230666 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.0435115;DP=3303;DP4=1548,1727,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000313426;MQSB=0.871919;RPB=0.838654;SGB=-2.96336;VDB=0.944581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.3:14235013 chr03:014235013 0 W/14235013-14235013 FN1566-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g24950 expressed protein SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN4183-S.SNP.3:14239309 chr03:014239309 0 W/14239309-14239309 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.642179;DP=2607;DP4=1318,1216,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3978e-05;MQSB=0.99737;RPB=0.447875;SGB=31.4354;VDB=0.779167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.3:14245980 chr03:014245980 0 W/14245980-14245980 FN1283-S Single Base Substitution G-A INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1741-S.SNP.3:14266148 chr03:014266148 0 W/14266148-14266148 FN1741-S SNP T -> C AC=2;AN=188;BQB=0.95729;DP=2892;DP4=1618,1198,21,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.77368e-18;MQSB=0.995934;RPB=0.22153;SGB=113.937;VDB=0.0647157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.3:14267113 chr03:014267113 0 W/14267113-14267113 FN1302-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN409-S.SNP.3:14272753 chr03:014272753 0 W/14272753-14272753 FN409-S Single Base Substitution G-A INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN849-S.SNP.3:14273179 chr03:014273179 0 W/14273179-14273179 FN849-S Single Base Substitution C-T INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1239-S.SNP.3:14274509 chr03:014274509 0 W/14274509-14274509 FN1239-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4230-S.SNP.3:14283783 chr03:014283783 0 W/14283783-14283783 FN4230-S SNP C -> A AC=1;AN=170;BQB=0.461376;DP=2263;DP4=1119,1004,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.16868e-06;MQSB=0.959657;RPB=0.464485;SGB=-17.4322;VDB=0.758614;EFF=INTRON(MODIFIER||||235|LOC_Os03g25020|protein_coding|CODING|LOC_Os03g25020.1|3|1) FN3610-S.SNP.3:14288626 chr03:014288626 0 W/14288626-14288626 FN3610-S SNP C -> G AC=2;AN=190;BQB=0.82516;DP=1902;DP4=1095,723,14,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.06722e-09;MQSB=0.60441;RPB=0.288956;SGB=90.0802;VDB=0.0840004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.3:14288708 chr03:014288708 0 W/14288708-14288708 FN3568-S SNP A -> G AC=2;AN=188;BQB=0.952082;DP=1996;DP4=1144,746,13,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.74225e-07;MQSB=0.846171;RPB=0.273597;SGB=62.6088;VDB=0.183307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.3:14310710 chr03:014310710 0 W/14310710-14310710 FN2592-S SNP G -> C AC=1;AN=198;BQB=0.935662;DP=4204;DP4=1888,2060,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.80958e-11;MQSB=0.995508;RPB=0.38314;SGB=90.9049;VDB=0.64716;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.3:14311635 chr03:014311635 0 W/14311635-14311635 FN3599-S SNP A -> T AC=1;AN=188;BQB=0.999729;DP=2918;DP4=1403,1364,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.60612e-11;MQSB=0.101491;RPB=0.821573;SGB=71.6954;VDB=0.696591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.3:14311636 chr03:014311636 0 W/14311636-14311636 FN3599-S SNP A -> T AC=1;AN=188;BQB=0.854844;DP=2916;DP4=1391,1397,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.94849e-11;MQSB=0.0597152;RPB=0.737399;SGB=71.6954;VDB=0.714571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.3:14312569 chr03:014312569 0 W/14312569-14312569 FN3448-S SNP A -> T AC=1;AN=184;BQB=0.947949;DP=2355;DP4=1052,1226,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59253e-07;MQSB=0.773022;RPB=0.800209;SGB=28.7043;VDB=0.361713;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.3:14312802 chr03:014312802 0 W/14312802-14312802 FN888-S Single Base Substitution G-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN4181-S.SNP.3:14325808 chr03:014325808 0 W/14325808-14325808 FN4181-S SNP C -> A AC=2;AN=170;BQB=0.978256;DP=2618;DP4=1057,1463,16,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.80119e-17;MQSB=0.768218;RPB=0.7196;SGB=114.512;VDB=0.225672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.3:14325809 chr03:014325809 0 W/14325809-14325809 FN4181-S SNP T -> G AC=2;AN=170;BQB=0.957123;DP=2618;DP4=1039,1429,17,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.0676e-18;MQSB=0.704141;RPB=0.755346;SGB=58.9663;VDB=0.246757;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.3:14329064 chr03:014329064 0 W/14329064-14329064 FN419-S Single Base Substitution G-A INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2113-S.SNP.3:14331332 chr03:014331332 0 W/14331332-14331332 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.036107;DP=5249;DP4=2260,2941,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.163079;MQB=0.111247;MQSB=1.30896e-12;RPB=0.0242288;SGB=-40.0741;VDB=0.0567232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L182F|1275|LOC_Os03g25100|protein_coding|CODING|LOC_Os03g25100.1|1|1) FN1617-S.SNP.3:14336058 chr03:014336058 0 W/14336058-14336058 FN1617-S Single Base Substitution C-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2640-S.SNP.3:14345554 chr03:014345554 0 W/14345554-14345554 FN2640-S SNP A -> G AC=2;AN=200;BQB=0.145852;DP=4871;DP4=2628,1869,27,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81546e-30;MQSB=0.989241;RPB=0.951231;SGB=112.85;VDB=0.0939759;EFF=UTR_5_PRIME(MODIFIER||211||305|LOC_Os03g25120|protein_coding|CODING|LOC_Os03g25120.1|1|1) FN2401.SNP.3:14346391 chr03:014346391 0 W/14346391-14346391 FN2401 SNP T -> G AC=2;AN=200;BQB=0.801787;DP=4977;DP4=2353,2354,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.14433e-22;MQSB=0.979764;RPB=0.578653;SGB=141.214;VDB=0.87382;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.3:14353016 chr03:014353016 0 W/14353016-14353016 FN573-S Single Base Substitution G-C INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1381-S.SNP.3:14353038 chr03:014353038 0 W/14353038-14353038 FN1381-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2109-S.SNP.3:14357154 chr03:014357154 0 W/14357154-14357154 FN2109-S SNP A -> T AC=2;AN=168;BQB=0.915931;DP=4519;DP4=2230,2224,24,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.94147e-25;MQSB=0.999012;RPB=0.22018;SGB=-57.7188;VDB=0.0109449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.3:14364842 chr03:014364842 0 W/14364842-14364842 FN1528-S Single Base Substitution T-C INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN755-S.SNP.3:14370970 chr03:014370970 0 W/14370970-14370970 FN755-S Single Base Substitution A-C INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2597-S.SNP.3:14372758 chr03:014372758 0 W/14372758-14372758 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.786199;DP=3722;DP4=1796,1729,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.17013e-10;MQSB=0.976657;RPB=0.596218;SGB=6.15916;VDB=0.129671;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.3:14374711 chr03:014374711 0 W/14374711-14374711 FN1420-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN-137.SNP.3:14376926 chr03:014376926 0 W/14376926-14376926 FN-137 Single Base Substitution A-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1570-S.SNP.3:14389761 chr03:014389761 0 W/14389761-14389761 FN1570-S Single Base Substitution A-T INTERGENIC Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN351-S.SNP.3:14390097 chr03:014390097 0 W/14390097-14390097 FN351-S Single Base Substitution A-T INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2788-S.SNP.3:14396025 chr03:014396025 0 W/14396025-14396025 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.0512545;DP=3472;DP4=1998,1240,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000237635;MQSB=0.542089;RPB=0.742719;SGB=42.3199;VDB=0.0905382;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN-113 Single Base Substitution C-T INTERGENIC HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-362.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN-362 Single Base Substitution C-T INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1396-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN1396-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1618-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN1618-S Single Base Substitution C-T INTERGENIC Homo SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2253-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN2253-S SNP C -> T AC=2;AN=190;BQB=0.218662;DP=4479;DP4=2441,1647,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.05674e-06;MQSB=0.000251334;RPB=0.213873;SGB=-36.3245;VDB=0.440254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.992522;DP=4462;DP4=2529,1651,18,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03807e-16;MQSB=0.00251066;RPB=0.582998;SGB=94.3471;VDB=0.2108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.970513;DP=2240;DP4=1374,750,15,8;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.46094e-10;MQSB=1.5385e-09;RPB=0.554072;SGB=43.4494;VDB=0.5185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.672864;DP=1846;DP4=1208,561,17,3;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=8.1761e-08;MQSB=9.04916e-12;RPB=0.989612;SGB=82.0227;VDB=0.616221;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.3:14413091 chr03:014413091 0 W/14413091-14413091 FN391-S Single Base Substitution C-T INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN_N2-29a-1.SNP.3:14414151 chr03:014414151 0 W/14414151-14414151 FN_N2-29a-1 Single Base Substitution A-C Homo LOC_Os03g25220 OsFBX88 - F-box domain containing protein, expressed SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3316-S.SNP.3:14415295 chr03:014415295 0 W/14415295-14415295 FN3316-S SNP C -> A AC=1;AN=184;BQB=0.417583;DP=3488;DP4=2199,1127,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.57546e-07;MQSB=0.988797;RPB=0.788491;SGB=60.4004;VDB=0.404127;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.3:14415966 chr03:014415966 0 W/14415966-14415966 FN4044-S SNP C -> T AC=1;AN=168;BQB=0.712562;DP=3052;DP4=1507,1420,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.26762e-07;MQSB=0.698342;RPB=0.0720951;SGB=41.6096;VDB=0.185215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.3:14420120 chr03:014420120 0 W/14420120-14420120 FN3411-S SNP C -> A AC=1;AN=184;BQB=0.63884;DP=3200;DP4=1383,1751,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.0150888;MQSB=0.555841;RPB=0.355917;SGB=35.1773;VDB=0.326267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L345M|424|LOC_Os03g25240|protein_coding|CODING|LOC_Os03g25240.1|2|1) FN4098-S.SNP.3:14421313 chr03:014421313 0 W/14421313-14421313 FN4098-S SNP A -> G AC=1;AN=182;BQB=0.964881;DP=2782;DP4=1318,1389,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.74612e-09;MQSB=0.999424;RPB=0.423306;SGB=57.644;VDB=0.147066;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.3:14422760 chr03:014422760 0 W/14422760-14422760 FN-339 Single Base Substitution C-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1109-S.SNP.3:14429162 chr03:014429162 0 W/14429162-14429162 FN1109-S Single Base Substitution C-T INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2397.SNP.3:14429808 chr03:014429808 0 W/14429808-14429808 FN2397 SNP A -> G AC=1;AN=200;BQB=0.769394;DP=5171;DP4=2549,2294,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.34667e-17;MQSB=0.823082;RPB=0.810603;SGB=105.163;VDB=0.816494;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.3:14430851 chr03:014430851 0 W/14430851-14430851 FN1224-S Single Base Substitution C-A INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3866-S.SNP.3:14441900 chr03:014441900 0 W/14441900-14441900 FN3866-S SNP C -> T AC=2;AN=158;BQB=0.999727;DP=2374;DP4=1180,1075,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.60007e-12;MQSB=0.930161;RPB=0.663438;SGB=61.029;VDB=0.917345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.3:14441902 chr03:014441902 0 W/14441902-14441902 FN3866-S SNP T -> A AC=2;AN=158;BQB=0.834329;DP=2379;DP4=1185,1093,10,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.61416e-12;MQSB=0.950127;RPB=0.964982;SGB=61.029;VDB=0.967787;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.3:14442444 chr03:014442444 0 W/14442444-14442444 FN-176 Single Base Substitution G-T INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN479-S.SNP.3:14449391 chr03:014449391 0 W/14449391-14449391 FN479-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g25310 expressed protein SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN680-S.SNP.3:14450513 chr03:014450513 0 W/14450513-14450513 FN680-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN973-S.SNP.3:14451889 chr03:014451889 0 W/14451889-14451889 FN973-S Single Base Substitution G-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN1113-S.SNP.3:14453042 chr03:014453042 0 W/14453042-14453042 FN1113-S Single Base Substitution A-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1475-S.SNP.3:14454112 chr03:014454112 0 W/14454112-14454112 FN1475-S Single Base Substitution C-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2667-S.SNP.3:14454862 chr03:014454862 0 W/14454862-14454862 FN2667-S SNP T -> G AC=1;AN=200;BQB=0.0237638;DP=4984;DP4=2049,2540,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000401284;MQB=1.10685e-11;MQSB=0.951212;RPB=0.429114;SGB=-73.6537;VDB=0.9712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V45G|323|LOC_Os03g25320|protein_coding|CODING|LOC_Os03g25320.1|1|1) FN2373.SNP.3:14465505 chr03:014465505 0 W/14465505-14465505 FN2373 SNP G -> A AC=1;AN=192;BQB=0.844242;DP=4732;DP4=2142,2162,20,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74472e-19;MQSB=0.755817;RPB=0.428855;SGB=-139.773;VDB=0.85201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.3:14466355 chr03:014466355 0 W/14466355-14466355 FN3571-S SNP C -> A AC=1;AN=188;BQB=0.979276;DP=2696;DP4=1325,1316,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00259644;MQB=4.07084e-10;MQSB=0.204565;RPB=0.994342;SGB=7.0815;VDB=0.0561426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.3:14474345 chr03:014474345 0 W/14474345-14474345 FN3516-S SNP A -> G AC=2;AN=188;BQB=0.46398;DP=2535;DP4=1274,1153,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.00187e-12;MQSB=0.980639;RPB=0.223176;SGB=78.5038;VDB=0.229017;EFF=INTERGENIC(MODIFIER||||||||||1) FN981-S.SNP.3:14476876 chr03:014476876 0 W/14476876-14476876 FN981-S Single Base Substitution G-C INTERGENIC HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2640-S.SNP.3:14489674 chr03:014489674 0 W/14489674-14489674 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.366713;DP=4513;DP4=2027,2225,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.9613e-19;MQSB=0.98544;RPB=0.826651;SGB=132.552;VDB=0.262484;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.3:14490750 chr03:014490750 0 W/14490750-14490750 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1030-S.SNP.3:14490773 chr03:014490773 0 W/14490773-14490773 FN1030-S Single Base Substitution A-G INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2220-S.SNP.3:14496124 chr03:014496124 0 W/14496124-14496124 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.597868;DP=4178;DP4=1859,1721,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13379e-06;MQSB=0.98502;RPB=0.604835;SGB=-81.4217;VDB=0.870222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T254A|332|LOC_Os03g25360|protein_coding|CODING|LOC_Os03g25360.1|2|1) FN3673-S.SNP.3:14498092 chr03:014498092 0 W/14498092-14498092 FN3673-S SNP C -> A AC=2;AN=190;BQB=0.786343;DP=3061;DP4=1361,1563,27,21;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000326691;MQB=6.35292e-17;MQSB=9.57222e-14;RPB=0.771828;SGB=150.471;VDB=0.472064;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.3:14498593 chr03:014498593 0 W/14498593-14498593 FN1358-S Single Base Substitution A-C INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1423-S.SNP.3:14500839 chr03:014500839 0 W/14500839-14500839 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3570-S.SNP.3:14540190 chr03:014540190 0 W/14540190-14540190 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.998556;DP=2834;DP4=1294,1412,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.51467e-09;MQSB=0.998135;RPB=0.860677;SGB=46.7622;VDB=0.536094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.3:14540438 chr03:014540438 0 W/14540438-14540438 FN1103-S Single Base Substitution G-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1121-S.SNP.3:14542051 chr03:014542051 0 W/14542051-14542051 FN1121-S Single Base Substitution C-A INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN563-S.SNP.3:14544754 chr03:014544754 0 W/14544754-14544754 FN563-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2119-S.SNP.3:14545063 chr03:014545063 0 W/14545063-14545063 FN2119-S SNP C -> T AC=1;AN=168;BQB=0.446084;DP=3782;DP4=2135,1568,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.62822e-06;MQSB=0.999971;RPB=0.591237;SGB=-38.9357;VDB=0.128059;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.3:14550544 chr03:014550544 0 W/14550544-14550544 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.759571;DP=2730;DP4=1321,1278,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53774e-05;MQSB=0.985823;RPB=0.972339;SGB=30.1021;VDB=0.648709;EFF=INTRON(MODIFIER||||75|LOC_Os03g25464|protein_coding|CODING|LOC_Os03g25464.1|1|1) FN2538-S.SNP.3:14555695 chr03:014555695 0 W/14555695-14555695 FN2538-S SNP A -> G AC=1;AN=198;BQB=0.478373;DP=4419;DP4=2088,2069,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.65728e-09;MQSB=0.518648;RPB=0.84784;SGB=58.7391;VDB=0.214264;EFF=INTRON(MODIFIER||||518|LOC_Os03g25480|protein_coding|CODING|LOC_Os03g25480.1|4|1) FN2638-S.SNP.3:14555778 chr03:014555778 0 W/14555778-14555778 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.779203;DP=5075;DP4=2315,2329,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.45458e-07;MQSB=0.795595;RPB=0.621982;SGB=-0.141083;VDB=0.719293;EFF=INTRON(MODIFIER||||518|LOC_Os03g25480|protein_coding|CODING|LOC_Os03g25480.1|4|1) FN2704-S.SNP.3:14567552 chr03:014567552 0 W/14567552-14567552 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.515717;DP=4744;DP4=2404,2130,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.42839e-10;MQSB=0.98818;RPB=0.935457;SGB=24.2746;VDB=0.80042;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W21R|208|LOC_Os03g25500|protein_coding|CODING|LOC_Os03g25500.1|1|1) FN1348-S.SNP.3:14568051 chr03:014568051 0 W/14568051-14568051 FN1348-S Single Base Substitution C-T INTRON HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3883-S.SNP.3:14568168 chr03:014568168 0 W/14568168-14568168 FN3883-S SNP G -> A AC=2;AN=158;BQB=0.998762;DP=2471;DP4=1106,1257,12,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.10992e-14;MQSB=0.999664;RPB=0.97198;SGB=90.7616;VDB=0.718977;EFF=INTRON(MODIFIER||||208|LOC_Os03g25500|protein_coding|CODING|LOC_Os03g25500.1|1|1) FN3064-S.SNP.3:14577067 chr03:014577067 0 W/14577067-14577067 FN3064-S SNP C -> T AC=1;AN=184;BQB=0.951077;DP=2972;DP4=1180,1718,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.17405e-09;MQSB=0.851106;RPB=0.829563;SGB=57.786;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.3:14591058 chr03:014591058 0 W/14591058-14591058 FN-231 Single Base Substitution G-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1182-S.SNP.3:14593751 chr03:014593751 0 W/14593751-14593751 FN1182-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3746-S.SNP.3:14598140 chr03:014598140 0 W/14598140-14598140 FN3746-S SNP G -> A AC=2;AN=190;BQB=0.201961;DP=2345;DP4=1033,1220,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52888e-07;MQSB=0.465338;RPB=0.964262;SGB=64.5316;VDB=0.23771;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.3:14601544 chr03:014601544 0 W/14601544-14601544 FN3783-S SNP C -> A AC=1;AN=190;BQB=0.603845;DP=3006;DP4=1381,1484,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68082e-05;MQSB=0.999036;RPB=0.828866;SGB=36.1006;VDB=0.855572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.3:14601803 chr03:014601803 0 W/14601803-14601803 FN3593-S SNP C -> T AC=1;AN=190;BQB=0.95436;DP=2696;DP4=1263,1345,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61807e-05;MQSB=0.982927;RPB=0.992485;SGB=30.8803;VDB=0.740326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.3:14604353 chr03:014604353 0 W/14604353-14604353 FN-191 Single Base Substitution A-G INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN2486.SNP.3:14607967 chr03:014607967 0 W/14607967-14607967 FN2486 SNP T -> A AC=1;AN=200;BQB=0.999109;DP=4550;DP4=2078,2060,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85202e-12;MQSB=0.376408;RPB=0.978663;SGB=55.5366;VDB=0.755824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.3:14607968 chr03:014607968 0 W/14607968-14607968 FN2486 SNP T -> A AC=1;AN=200;BQB=0.995336;DP=4552;DP4=2043,2086,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78131e-15;MQSB=0.501612;RPB=0.890751;SGB=58.1418;VDB=0.402344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.3:14609627 chr03:014609627 0 W/14609627-14609627 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.567356;DP=4108;DP4=1949,1955,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64553e-11;MQSB=0.86616;RPB=0.99829;SGB=91.1059;VDB=0.720364;EFF=INTRON(MODIFIER||||119|LOC_Os03g25560|protein_coding|CODING|LOC_Os03g25560.1|2|1) FN4039-S.SNP.3:14611990 chr03:014611990 0 W/14611990-14611990 FN4039-S SNP A -> T AC=1;AN=168;BQB=0.726614;DP=2641;DP4=1253,1242,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000378644;MQB=2.51168e-07;MQSB=0.957939;RPB=0.728169;SGB=61.0344;VDB=0.124328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.3:14612073 chr03:014612073 0 W/14612073-14612073 FN1476-S Single Base Substitution G-T INTERGENIC Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1064-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN1064-S Single Base Substitution G-A INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2600-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN2600-S SNP G -> A AC=2;AN=198;BQB=0.92112;DP=4465;DP4=2243,1967,24,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.58926e-26;MQSB=0.998652;RPB=0.772392;SGB=104.603;VDB=0.624466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN3324-S SNP G -> A AC=2;AN=184;BQB=0.946966;DP=3022;DP4=1560,1320,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.35309e-14;MQSB=0.936266;RPB=0.97148;SGB=78.0093;VDB=0.734123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN3896-S SNP G -> A AC=2;AN=158;BQB=0.997801;DP=2589;DP4=1294,1187,9,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.92265e-12;MQSB=0.886052;RPB=0.775039;SGB=99.5005;VDB=0.659401;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN4163-S SNP G -> A AC=2;AN=170;BQB=0.752521;DP=2500;DP4=1243,1159,14,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.22214e-14;MQSB=0.89008;RPB=0.907264;SGB=118.955;VDB=0.925346;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN750-S Single Base Substitution G-A INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN972-S.SNP.3:14621758 chr03:014621758 0 W/14621758-14621758 FN972-S Single Base Substitution G-A INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN3353-S.SNP.3:14623960 chr03:014623960 0 W/14623960-14623960 FN3353-S SNP A -> G AC=1;AN=184;BQB=0.984053;DP=2692;DP4=1232,1359,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.58378e-07;MQSB=0.87069;RPB=0.191506;SGB=25.1826;VDB=0.0457323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.3:14623961 chr03:014623961 0 W/14623961-14623961 FN3353-S SNP A -> G AC=1;AN=184;BQB=0.935507;DP=2696;DP4=1236,1391,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.68958e-07;MQSB=0.926772;RPB=0.128514;SGB=39.699;VDB=0.0369482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.3:14629446 chr03:014629446 0 W/14629446-14629446 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.824747;DP=2481;DP4=1069,1253,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00033576;MQSB=7.43197e-07;RPB=0.95515;SGB=35.4339;VDB=0.386322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1583-S.SNP.3:14630782 chr03:014630782 0 W/14630782-14630782 FN1583-S Single Base Substitution C-T INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2612-S.SNP.3:14633077 chr03:014633077 0 W/14633077-14633077 FN2612-S SNP G -> A AC=2;AN=198;BQB=0.380225;DP=4363;DP4=2030,1980,36,25;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.0084804;MQB=1.20142e-26;MQSB=0.352407;RPB=0.999124;SGB=77.9396;VDB=0.811763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.3:14637264 chr03:014637264 0 W/14637264-14637264 FN1039-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g25580 retrotransposon protein, putative, unclassified, expressed SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN774-S.SNP.3:14638666 chr03:014638666 0 W/14638666-14638666 FN774-S Single Base Substitution G-A INTRON HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2664-S.SNP.3:14638711 chr03:014638711 0 W/14638711-14638711 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.458708;DP=4804;DP4=2104,2449,22,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.66824e-23;MQSB=0.321491;RPB=0.529323;SGB=126.794;VDB=0.720556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E313K|662|LOC_Os03g25580|protein_coding|CODING|LOC_Os03g25580.1|4|1) FN2681-S.SNP.3:14638929 chr03:014638929 0 W/14638929-14638929 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.502555;DP=4479;DP4=2036,2181,10,19;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.15222e-12;MQSB=0.874862;RPB=0.508703;SGB=94.3471;VDB=0.265898;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S385|662|LOC_Os03g25580|protein_coding|CODING|LOC_Os03g25580.1|4|1) FN1279-S.SNP.3:14639766 chr03:014639766 0 W/14639766-14639766 FN1279-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g25580 retrotransposon protein, putative, unclassified, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3859-S.SNP.3:14641911 chr03:014641911 0 W/14641911-14641911 FN3859-S SNP C -> A AC=1;AN=158;BQB=0.547155;DP=2967;DP4=1407,1425,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0104483;MQB=0.000642407;MQSB=0.0225827;RPB=0.0861683;SGB=42.6978;VDB=0.59306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K1275N|1602|LOC_Os03g25590|protein_coding|CODING|LOC_Os03g25590.1|3|1) FN-342.SNP.3:14643017 chr03:014643017 0 W/14643017-14643017 FN-342 Single Base Substitution G-A STOP_GAINED HET LOC_Os03g25590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2707-S.SNP.3:14644109 chr03:014644109 0 W/14644109-14644109 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.993009;DP=4632;DP4=2083,2231,13,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0127375;MQB=2.10905e-09;MQSB=0.498196;RPB=0.639706;SGB=81.8956;VDB=0.918244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V572I|1602|LOC_Os03g25590|protein_coding|CODING|LOC_Os03g25590.1|2|1) FN1529-S.SNP.3:14646876 chr03:014646876 0 W/14646876-14646876 FN1529-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2568-S.SNP.3:14649147 chr03:014649147 0 W/14649147-14649147 FN2568-S SNP C -> G AC=1;AN=198;BQB=0.828249;DP=3537;DP4=1954,1326,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000282951;MQSB=0.688553;RPB=0.922916;SGB=22.1736;VDB=0.0576708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.3:14652616 chr03:014652616 0 W/14652616-14652616 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.0894603;DP=3598;DP4=1357,2198,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04775e-06;MQSB=0.910037;RPB=0.8412;SGB=-63.3606;VDB=0.4339;EFF=INTERGENIC(MODIFIER||||||||||1) FN4144-S.SNP.3:14653470 chr03:014653470 0 W/14653470-14653470 FN4144-S SNP G -> A AC=2;AN=170;BQB=0.978935;DP=2420;DP4=1206,1122,15,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.41604e-17;MQSB=0.778307;RPB=0.85736;SGB=100.288;VDB=0.220494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.3:14653853 chr03:014653853 0 W/14653853-14653853 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.992817;DP=2670;DP4=1152,1395,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.03219e-08;MQSB=0.999822;RPB=0.277415;SGB=22.1847;VDB=0.248028;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.3:14655721 chr03:014655721 0 W/14655721-14655721 FN-21 Single Base Substitution G-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN2568-S.SNP.3:14666044 chr03:014666044 0 W/14666044-14666044 FN2568-S SNP T -> A AC=1;AN=198;BQB=0.997985;DP=4050;DP4=1978,1826,2,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42566e-05;MQSB=0.976562;RPB=0.999099;SGB=5.98864;VDB=0.0795616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.3:14674499 chr03:014674499 0 W/14674499-14674499 FN3325-S SNP G -> A AC=2;AN=184;BQB=0.805589;DP=3203;DP4=1580,1503,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.26294e-11;MQSB=0.995808;RPB=0.89706;SGB=74.4875;VDB=0.598008;EFF=INTRON(MODIFIER||||498|LOC_Os03g25620|protein_coding|CODING|LOC_Os03g25620.1|4|1|WARNING_TRANSCRIPT_INCOMPLETE) FN837-S.SNP.3:14681147 chr03:014681147 0 W/14681147-14681147 FN837-S Single Base Substitution G-A INTRON HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2254-S.SNP.3:14684400 chr03:014684400 0 W/14684400-14684400 FN2254-S SNP C -> A AC=2;AN=190;BQB=0.374613;DP=5080;DP4=2540,2220,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.97535e-16;MQSB=0.951719;RPB=0.999918;SGB=131.065;VDB=0.700062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.3:14686195 chr03:014686195 0 W/14686195-14686195 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.267318;DP=3901;DP4=1801,1737,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.16543e-08;MQSB=0.13415;RPB=0.631508;SGB=80.9724;VDB=0.099267;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W302*|417|LOC_Os03g25650|protein_coding|CODING|LOC_Os03g25650.1|4|1) FN1290-S.SNP.3:14687614 chr03:014687614 0 W/14687614-14687614 FN1290-S Single Base Substitution G-T INTRON HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN3568-S.SNP.3:14689769 chr03:014689769 0 W/14689769-14689769 FN3568-S SNP G -> A AC=2;AN=188;BQB=0.966345;DP=3036;DP4=1698,1246,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.88368e-17;MQSB=0.999187;RPB=0.305651;SGB=117.128;VDB=0.41381;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.3:14701676 chr03:014701676 0 W/14701676-14701676 FN1431-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g25690 expressed protein SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN3675-S.SNP.3:14702901 chr03:014702901 0 W/14702901-14702901 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.97345;DP=2939;DP4=1351,1472,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00717223;MQSB=0.853395;RPB=0.876634;SGB=25.439;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.3:14706544 chr03:014706544 0 W/14706544-14706544 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1382-S.SNP.3:14707062 chr03:014707062 0 W/14707062-14707062 FN1382-S Single Base Substitution A-G INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3528-S.SNP.3:14709295 chr03:014709295 0 W/14709295-14709295 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.993264;DP=2831;DP4=1190,1584,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.97192e-06;MQSB=0.924122;RPB=0.91054;SGB=39.8925;VDB=0.553359;EFF=INTRON(MODIFIER||||575|LOC_Os03g25700|protein_coding|CODING|LOC_Os03g25700.1|2|1) FN591-S.SNP.3:14709837 chr03:014709837 0 W/14709837-14709837 FN591-S Single Base Substitution A-G INTRON HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN3513-S.SNP.3:14723948 chr03:014723948 0 W/14723948-14723948 FN3513-S SNP A -> G AC=1;AN=188;BQB=0.648493;DP=2647;DP4=1085,1472,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.51776e-05;MQSB=0.999513;RPB=0.946821;SGB=8.27326;VDB=0.838183;EFF=INTRON(MODIFIER||||277|LOC_Os03g25720|protein_coding|CODING|LOC_Os03g25720.1|4|1) FN1572-S.SNP.3:14735242 chr03:014735242 0 W/14735242-14735242 FN1572-S Single Base Substitution G-A INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1572-S.SNP.3:14735244 chr03:014735244 0 W/14735244-14735244 FN1572-S Single Base Substitution G-A INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN2561-S.SNP.3:14736733 chr03:014736733 0 W/14736733-14736733 FN2561-S SNP C -> T AC=2;AN=198;BQB=0.271333;DP=4360;DP4=2062,2072,7,3;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.0586e-06;MQSB=0.851121;RPB=0.997394;SGB=11.1786;VDB=0.929985;EFF=INTRON(MODIFIER||||346|LOC_Os03g25750|protein_coding|CODING|LOC_Os03g25750.1|3|1) FN983-S.SNP.3:14736874 chr03:014736874 0 W/14736874-14736874 FN983-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g25750 SNARE associated Golgi protein, putative, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN-381.SNP.3:14741045 chr03:014741045 0 W/14741045-14741045 FN-381 Single Base Substitution G-T INTRON HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2239-S.SNP.3:14747238 chr03:014747238 0 W/14747238-14747238 FN2239-S SNP A -> G AC=1;AN=190;BQB=0.500641;DP=4944;DP4=2254,2430,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.72289e-12;MQSB=0.998386;RPB=0.997086;SGB=38.983;VDB=0.85144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.3:14751742 chr03:014751742 0 W/14751742-14751742 FN1133-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2339.SNP.3:14758331 chr03:014758331 0 W/14758331-14758331 FN2339 SNP C -> T AC=1;AN=192;BQB=0.0416349;DP=4122;DP4=2037,1777,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.79655e-07;MQSB=0.698571;RPB=0.0197936;SGB=-60.1939;VDB=0.189598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.3:14761707 chr03:014761707 0 W/14761707-14761707 FN3550-S SNP C -> A AC=1;AN=188;BQB=0.531588;DP=2548;DP4=1332,1160,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000188749;MQSB=0.982152;RPB=0.854521;SGB=18.2682;VDB=0.360182;EFF=INTRON(MODIFIER||||478|LOC_Os03g25790|protein_coding|CODING|LOC_Os03g25790.2|1|1),INTRON(MODIFIER||||478|LOC_Os03g25790|protein_coding|CODING|LOC_Os03g25790.1|1|1) FN3505-S.SNP.3:14769912 chr03:014769912 0 W/14769912-14769912 FN3505-S SNP C -> T AC=2;AN=188;BQB=0.615987;DP=2781;DP4=1625,1046,8,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.23576e-06;MQSB=0.965274;RPB=0.707434;SGB=43.0708;VDB=0.730337;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.3:14773412 chr03:014773412 0 W/14773412-14773412 FN3899-S SNP G -> A AC=1;AN=158;BQB=0.320006;DP=2553;DP4=1169,1246,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.63176e-08;MQSB=0.888014;RPB=0.314744;SGB=6.19449;VDB=0.110461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.3:14775108 chr03:014775108 0 W/14775108-14775108 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.946843;DP=3631;DP4=1749,1684,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.61653e-08;MQSB=0.944316;RPB=0.795189;SGB=68.91;VDB=0.846847;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.3:14780742 chr03:014780742 0 W/14780742-14780742 FN-387 Single Base Substitution T-C INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2754-S.SNP.3:14795365 chr03:014795365 0 W/14795365-14795365 FN2754-S SNP A -> G AC=1;AN=200;BQB=0.564758;DP=4677;DP4=2255,2209,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.3343e-11;MQSB=0.888222;RPB=0.00377463;SGB=-36.5;VDB=0.0516831;EFF=INTRON(MODIFIER||||547|LOC_Os03g25869|protein_coding|CODING|LOC_Os03g25869.1|2|1) FN3464-S.SNP.3:14795365 chr03:014795365 0 W/14795365-14795365 FN3464-S SNP A -> G AC=2;AN=184;BQB=0.710916;DP=2625;DP4=1246,1279,12,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.49687e-09;MQSB=0.997045;RPB=0.485148;SGB=56.8786;VDB=0.705566;EFF=INTRON(MODIFIER||||547|LOC_Os03g25869|protein_coding|CODING|LOC_Os03g25869.1|2|1) FN942-S.SNP.3:14795365 chr03:014795365 0 W/14795365-14795365 FN942-S Single Base Substitution A-G INTRON HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2421.SNP.3:14796440 chr03:014796440 0 W/14796440-14796440 FN2421 SNP C -> T AC=1;AN=200;BQB=0.672498;DP=4801;DP4=1823,2337,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70651e-08;MQSB=0.989907;RPB=0.851694;SGB=1.46408;VDB=0.544024;EFF=INTRON(MODIFIER||||547|LOC_Os03g25869|protein_coding|CODING|LOC_Os03g25869.1|1|1) FN466-S.SNP.3:14797151 chr03:014797151 0 W/14797151-14797151 FN466-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g25869 amino acid permease family protein, putative, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN466-S.SNP.3:14797152 chr03:014797152 0 W/14797152-14797152 FN466-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g25869 amino acid permease family protein, putative, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-335.SNP.3:14799387 chr03:014799387 0 W/14799387-14799387 FN-335 Single Base Substitution T-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1351-S.SNP.3:14810122 chr03:014810122 0 W/14810122-14810122 FN1351-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g25890 retrotransposon protein, putative, unclassified, expressed SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2491.SNP.3:14811287 chr03:014811287 0 W/14811287-14811287 FN2491 SNP G -> A AC=1;AN=200;BQB=0.510364;DP=4595;DP4=2125,2240,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000710929;MQSB=0.581938;RPB=0.693021;SGB=22.2439;VDB=0.0752526;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.3:14812964 chr03:014812964 0 W/14812964-14812964 FN563-S Single Base Substitution G-A INTERGENIC HOMO SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-308.SNP.3:14813558 chr03:014813558 0 W/14813558-14813558 FN-308 Single Base Substitution T-A INTERGENIC HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN702-S.SNP.3:14822144 chr03:014822144 0 W/14822144-14822144 FN702-S Single Base Substitution C-G INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN_1017-1.SNP.3:14824322 chr03:014824322 0 W/14824322-14824322 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-199.SNP.3:14833579 chr03:014833579 0 W/14833579-14833579 FN-199 Single Base Substitution C-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-199.SNP.3:14833580 chr03:014833580 0 W/14833580-14833580 FN-199 Single Base Substitution C-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2530-S.SNP.3:14834340 chr03:014834340 0 W/14834340-14834340 FN2530-S SNP G -> T AC=1;AN=198;BQB=0.660089;DP=3991;DP4=2063,1771,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.49667e-07;MQSB=0.896052;RPB=0.738602;SGB=44.9538;VDB=0.104579;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:14838189 chr03:014838189 0 W/14838189-14838189 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.306008;DP=4792;DP4=2514,2014,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.31048e-12;MQSB=0.956111;RPB=0.999484;SGB=91.1059;VDB=0.609936;EFF=INTRON(MODIFIER||||499|LOC_Os03g25920|protein_coding|CODING|LOC_Os03g25920.1|1|1) FN487-S.SNP.3:14839373 chr03:014839373 0 W/14839373-14839373 FN487-S Single Base Substitution T-C INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2182-S.SNP.3:14858622 chr03:014858622 0 W/14858622-14858622 FN2182-S SNP C -> T AC=1;AN=190;BQB=0.46878;DP=5168;DP4=2543,2187,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.95586e-16;MQSB=0.758447;RPB=0.985349;SGB=32.0809;VDB=0.930789;EFF=UTR_5_PRIME(MODIFIER||68||109|LOC_Os03g25945|protein_coding|CODING|LOC_Os03g25945.1|1|1) FN2602-S.SNP.3:14861406 chr03:014861406 0 W/14861406-14861406 FN2602-S SNP G -> T AC=1;AN=198;BQB=0.952683;DP=4081;DP4=1993,1885,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.04674e-11;MQSB=0.871051;RPB=0.864812;SGB=50.9344;VDB=0.971217;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.3:14865820 chr03:014865820 0 W/14865820-14865820 FN762-S Single Base Substitution A-C INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN779-S.SNP.3:14867433 chr03:014867433 0 W/14867433-14867433 FN779-S Single Base Substitution T-C INTRON HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2140-S.SNP.3:14867888 chr03:014867888 0 W/14867888-14867888 FN2140-S SNP C -> T AC=2;AN=168;BQB=0.72678;DP=3525;DP4=1608,1834,36,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.86551e-29;MQSB=0.666683;RPB=0.979044;SGB=264.852;VDB=0.559279;EFF=INTRON(MODIFIER||||265|LOC_Os03g25960|protein_coding|CODING|LOC_Os03g25960.1|1|1) FN917-S.SNP.3:14869221 chr03:014869221 0 W/14869221-14869221 FN917-S Single Base Substitution A-G INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN2482.SNP.3:14871570 chr03:014871570 0 W/14871570-14871570 FN2482 SNP C -> T AC=1;AN=200;BQB=0.665618;DP=4794;DP4=2152,2306,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00187735;MQB=0.000516441;MQSB=0.935535;RPB=0.999807;SGB=18.639;VDB=0.360182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.3:14872144 chr03:014872144 0 W/14872144-14872144 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.973218;DP=3180;DP4=1478,1609,18,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.43085e-28;MQSB=0.996491;RPB=0.986728;SGB=203.451;VDB=0.0383524;EFF=UTR_3_PRIME(MODIFIER||1261||542|LOC_Os03g25970|protein_coding|CODING|LOC_Os03g25970.1|8|1),UTR_3_PRIME(MODIFIER||1261||542|LOC_Os03g25970|protein_coding|CODING|LOC_Os03g25970.2|7|1) FN3319-S.SNP.3:14877860 chr03:014877860 0 W/14877860-14877860 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.98569;DP=3280;DP4=1693,1481,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=3.07105e-08;MQSB=0.918455;RPB=0.982537;SGB=48.7425;VDB=0.0725241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.3:14884119 chr03:014884119 0 W/14884119-14884119 FN3925-S SNP C -> T AC=1;AN=158;BQB=0.913646;DP=2570;DP4=1243,1231,13,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.29564e-15;MQSB=0.734221;RPB=0.996962;SGB=84.6152;VDB=0.940691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3481-S.SNP.3:14890437 chr03:014890437 0 W/14890437-14890437 FN3481-S SNP C -> T AC=1;AN=184;BQB=0.603787;DP=2760;DP4=1365,1299,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.16157e-14;MQSB=0.982616;RPB=0.708166;SGB=40.9276;VDB=0.793388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.3:14890437 chr03:014890437 0 W/14890437-14890437 FN3992-S SNP C -> T AC=1;AN=168;BQB=0.755912;DP=2685;DP4=1259,1326,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.79689e-05;MQSB=0.995878;RPB=0.822549;SGB=21.0249;VDB=0.410847;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.3:14890437 chr03:014890437 0 W/14890437-14890437 FN4240-S SNP C -> T AC=2;AN=170;BQB=0.999017;DP=2412;DP4=1138,1192,15,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000414594;MQB=1.46732e-13;MQSB=0.877064;RPB=0.91754;SGB=105.627;VDB=0.229017;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.3:14890749 chr03:014890749 0 W/14890749-14890749 FN4093-S SNP A -> G AC=1;AN=182;BQB=0.940638;DP=2922;DP4=1281,1508,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.24018e-08;MQSB=0.966828;RPB=0.933324;SGB=48.6223;VDB=0.383963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.3:14891295 chr03:014891295 0 W/14891295-14891295 FN1035-S Single Base Substitution C-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1024-S.SNP.3:14892586 chr03:014892586 0 W/14892586-14892586 FN1024-S Single Base Substitution A-T INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2560-S.SNP.3:14896175 chr03:014896175 0 W/14896175-14896175 FN2560-S SNP C -> A AC=1;AN=198;BQB=0.998323;DP=4019;DP4=2048,1795,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.000939747;MQSB=0.954679;RPB=0.878286;SGB=31.1689;VDB=0.930513;EFF=UTR_3_PRIME(MODIFIER||130||264|LOC_Os03g25990|protein_coding|CODING|LOC_Os03g25990.1|3|1) FN893-S.SNP.3:14898605 chr03:014898605 0 W/14898605-14898605 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1033-S.SNP.3:14901752 chr03:014901752 0 W/14901752-14901752 FN1033-S Single Base Substitution C-T INTRON HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-206.SNP.3:14914402 chr03:014914402 0 W/14914402-14914402 FN-206 Single Base Substitution G-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-206.SNP.3:14914403 chr03:014914403 0 W/14914403-14914403 FN-206 Single Base Substitution C-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN485-S.SNP.3:14914732 chr03:014914732 0 W/14914732-14914732 FN485-S Single Base Substitution C-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3948-S.SNP.3:14921982 chr03:014921982 0 W/14921982-14921982 FN3948-S SNP G -> C AC=1;AN=168;BQB=0.756637;DP=2555;DP4=1307,1150,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43228e-11;MQSB=0.978785;RPB=0.932109;SGB=58.7637;VDB=0.744742;EFF=SPLICE_SITE_REGION(LOW||||604|LOC_Os03g26030|protein_coding|CODING|LOC_Os03g26030.1|8|1),INTRON(MODIFIER||||604|LOC_Os03g26030|protein_coding|CODING|LOC_Os03g26030.1|8|1) FN3825-S.SNP.3:14933080 chr03:014933080 0 W/14933080-14933080 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.69599;DP=2722;DP4=1323,1253,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000748509;MQSB=0.974055;RPB=0.964729;SGB=21.8853;VDB=0.717818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.3:14936644 chr03:014936644 0 W/14936644-14936644 FN3383-S SNP T -> A AC=2;AN=184;BQB=0.992095;DP=2618;DP4=1126,1266,12,9;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.9944e-05;MQSB=0.0646896;RPB=0.202007;SGB=63.9222;VDB=0.753492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.3:14943237 chr03:014943237 0 W/14943237-14943237 FN1499-S Single Base Substitution C-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1134-S.SNP.3:14946535 chr03:014946535 0 W/14946535-14946535 FN1134-S Single Base Substitution T-C INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN1346-S.SNP.3:14955497 chr03:014955497 0 W/14955497-14955497 FN1346-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3829-S.SNP.3:14955497 chr03:014955497 0 W/14955497-14955497 FN3829-S SNP C -> T AC=2;AN=190;BQB=0.74926;DP=3229;DP4=1188,1829,12,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.90833e-19;MQSB=0.833441;RPB=0.267441;SGB=149.281;VDB=0.191397;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C116|129|LOC_Os03g26100|protein_coding|CODING|LOC_Os03g26100.1|2|1) FN3985-S.SNP.3:14955497 chr03:014955497 0 W/14955497-14955497 FN3985-S SNP C -> T AC=1;AN=168;BQB=0.983925;DP=2956;DP4=1113,1614,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.92409e-08;MQSB=0.920466;RPB=0.676682;SGB=41.6096;VDB=0.0965087;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C116|129|LOC_Os03g26100|protein_coding|CODING|LOC_Os03g26100.1|2|1) FN3897-S.SNP.3:14956792 chr03:014956792 0 W/14956792-14956792 FN3897-S SNP A -> G AC=2;AN=158;BQB=0.316368;DP=2137;DP4=1002,1034,16,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.38573e-15;MQSB=0.819823;RPB=0.929039;SGB=56.991;VDB=0.584121;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.3:14961494 chr03:014961494 0 W/14961494-14961494 FN1514-S Single Base Substitution C-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN845-S.SNP.3:14962517 chr03:014962517 0 W/14962517-14962517 FN845-S Single Base Substitution T-C INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2546-S.SNP.3:14963765 chr03:014963765 0 W/14963765-14963765 FN2546-S SNP T -> A AC=1;AN=198;BQB=0.360764;DP=4083;DP4=2044,1807,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000344808;MQSB=0.0756638;RPB=0.985303;SGB=54.144;VDB=0.973394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M93L|104|LOC_Os03g26120|protein_coding|CODING|LOC_Os03g26120.1|2|1) FN2125-S.SNP.3:14964857 chr03:014964857 0 W/14964857-14964857 FN2125-S SNP T -> C AC=1;AN=168;BQB=0.0087502;DP=3171;DP4=2009,1119,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.38542e-13;MQSB=0.854499;RPB=0.163418;SGB=-42.3508;VDB=0.573531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.3:14969742 chr03:014969742 0 W/14969742-14969742 FN2475 SNP T -> A AC=1;AN=200;BQB=0.0372081;DP=4095;DP4=1707,1934,13,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.47607e-05;MQSB=0.23675;RPB=0.156478;SGB=-36.5;VDB=0.0531826;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.3:14998675 chr03:014998675 0 W/14998675-14998675 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.807723;DP=2575;DP4=1324,1101,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0642e-05;MQSB=0.929498;RPB=0.975774;SGB=15.7097;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.3:14999254 chr03:014999254 0 W/14999254-14999254 FN2173-S SNP A -> C AC=1;AN=168;BQB=0.00378843;DP=3869;DP4=2073,1754,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.02351e-11;MQSB=0.96973;RPB=0.794991;SGB=-45.1967;VDB=0.0907635;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.3:15000890 chr03:015000890 0 W/15000890-15000890 FN391-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g26210 helix-loop-helix DNA-binding domain containing protein, expressed SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3901-S.SNP.3:15012173 chr03:015012173 0 W/15012173-15012173 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.616126;DP=2456;DP4=1451,904,15,5;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0;MQB=4.8352e-05;MQSB=0.636604;RPB=0.762844;SGB=57.6596;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.3:15013438 chr03:015013438 0 W/15013438-15013438 FN3380-S SNP A -> G AC=1;AN=184;BQB=0.956241;DP=2916;DP4=1338,1477,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.56844e-06;MQSB=0.0130343;RPB=0.982703;SGB=39.2697;VDB=0.95886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.3:15016297 chr03:015016297 0 W/15016297-15016297 FN3868-S SNP T -> C AC=2;AN=158;BQB=0.773654;DP=1978;DP4=903,984,8,6;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=4.21182e-05;MQSB=0.596495;RPB=0.854153;SGB=55.806;VDB=0.400447;EFF=INTRON(MODIFIER||||827|LOC_Os03g26260|protein_coding|CODING|LOC_Os03g26260.1|1|1) FN-94.SNP.3:15023750 chr03:015023750 0 W/15023750-15023750 FN-94 Single Base Substitution T-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-223.SNP.3:15029788 chr03:015029788 0 W/15029788-15029788 FN-223 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g26280 expressed protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3577-S.SNP.3:15029788 chr03:015029788 0 W/15029788-15029788 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.914167;DP=2087;DP4=882,1149,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.165029;MQSB=8.60641e-05;RPB=0.946982;SGB=35.3493;VDB=0.0462669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P32L|84|LOC_Os03g26280|protein_coding|CODING|LOC_Os03g26280.1|1|1) FN3899-S.SNP.3:15029788 chr03:015029788 0 W/15029788-15029788 FN3899-S SNP C -> T AC=1;AN=158;BQB=0.867219;DP=1419;DP4=603,760,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0;MQB=0.0633325;MQSB=6.06075e-05;RPB=0.997836;SGB=17.2267;VDB=0.0251785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P32L|84|LOC_Os03g26280|protein_coding|CODING|LOC_Os03g26280.1|1|1) FN854-S.SNP.3:15029788 chr03:015029788 0 W/15029788-15029788 FN854-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g26280 expressed protein SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3890-S.SNP.3:15034015 chr03:015034015 0 W/15034015-15034015 FN3890-S SNP G -> C AC=1;AN=158;BQB=0.878825;DP=1591;DP4=147,1376,1,14;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000628536;MQB=7.17456e-07;MQSB=8.26693e-06;RPB=0.592957;SGB=60.1755;VDB=0.0152347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.3:15042110 chr03:015042110 0 W/15042110-15042110 FN3359-S SNP A -> T AC=1;AN=184;BQB=0.998661;DP=5063;DP4=2343,2507,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=1.75089e-11;MQSB=7.89863e-13;RPB=0.837847;SGB=45.9712;VDB=0.397986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S97T|287|LOC_Os03g26310|protein_coding|CODING|LOC_Os03g26310.1|1|1) FN428-S.SNP.3:15044899 chr03:015044899 0 W/15044899-15044899 FN428-S Single Base Substitution C-A INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-366.SNP.3:15049931 chr03:015049931 0 W/15049931-15049931 FN-366 Single Base Substitution G-A INTRON HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN897-S.SNP.3:15076670 chr03:015076670 0 W/15076670-15076670 FN897-S Single Base Substitution G-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN769-S.SNP.3:15080411 chr03:015080411 0 W/15080411-15080411 FN769-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g26380 transposon protein, putative, unclassified, expressed SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1213-S.SNP.3:15080629 chr03:015080629 0 W/15080629-15080629 FN1213-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1310-S.SNP.3:15080629 chr03:015080629 0 W/15080629-15080629 FN1310-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2725-S.SNP.3:15080629 chr03:015080629 0 W/15080629-15080629 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.788888;DP=4364;DP4=1869,2208,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40361e-05;MQSB=0.984781;RPB=0.98229;SGB=31.2392;VDB=0.940286;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q3|543|LOC_Os03g26380|protein_coding|CODING|LOC_Os03g26380.1|1|1) FN4136-S.SNP.3:15080629 chr03:015080629 0 W/15080629-15080629 FN4136-S SNP C -> T AC=2;AN=170;BQB=0.990693;DP=2283;DP4=951,1219,18,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.81707e-14;MQSB=0.968786;RPB=0.131604;SGB=114.512;VDB=0.418533;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q3|543|LOC_Os03g26380|protein_coding|CODING|LOC_Os03g26380.1|1|1) FN888-S.SNP.3:15080629 chr03:015080629 0 W/15080629-15080629 FN888-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1687-S.SNP.3:15094405 chr03:015094405 0 W/15094405-15094405 FN1687-S SNP C -> T AC=1;AN=188;BQB=0.912803;DP=1316;DP4=879,384,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0466306;MQSB=0.0286723;RPB=0.908785;SGB=3.99491;VDB=0.505717;EFF=INTERGENIC(MODIFIER||||||||||1) FN-48.SNP.3:15099624 chr03:015099624 0 W/15099624-15099624 FN-48 Single Base Substitution C-T INTERGENIC Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2091-S.SNP.3:15099624 chr03:015099624 0 W/15099624-15099624 FN2091-S SNP C -> T AC=1;AN=168;BQB=0.962849;DP=2961;DP4=1343,1547,2,19;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=8.40429e-06;MQSB=0.00508496;RPB=0.944904;SGB=36.7696;VDB=0.817843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.3:15099624 chr03:015099624 0 W/15099624-15099624 FN3285-S SNP C -> T AC=2;AN=184;BQB=0.850549;DP=3115;DP4=1428,1526,17,15;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0;MQB=1.04412e-08;MQSB=2.24035e-15;RPB=0.119765;SGB=139.178;VDB=0.307429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.3:15107378 chr03:015107378 0 W/15107378-15107378 FN2296 SNP A -> T AC=2;AN=192;BQB=0.748524;DP=4951;DP4=2522,2076,11,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.2492e-24;MQSB=0.998187;RPB=0.982128;SGB=-87.4713;VDB=0.105423;EFF=INTRON(MODIFIER||||411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|2|1) FN2296.SNP.3:15107379 chr03:015107379 0 W/15107379-15107379 FN2296 SNP C -> T AC=2;AN=192;BQB=0.99389;DP=4956;DP4=2492,2206,12,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.0664e-22;MQSB=0.985395;RPB=0.91888;SGB=38.6418;VDB=0.281592;EFF=INTRON(MODIFIER||||411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|2|1) FN2296.SNP.3:15107381 chr03:015107381 0 W/15107381-15107381 FN2296 SNP C -> A AC=2;AN=192;BQB=0.0946112;DP=4966;DP4=2467,2161,10,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.07414e-22;MQSB=0.998365;RPB=0.915119;SGB=111.067;VDB=0.116428;EFF=INTRON(MODIFIER||||411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|2|1) FN2278-S.SNP.3:15109266 chr03:015109266 0 W/15109266-15109266 FN2278-S SNP A -> G AC=2;AN=190;BQB=0.686714;DP=4880;DP4=2177,2299,35,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.03404e-35;MQSB=0.938824;RPB=0.483386;SGB=192.1;VDB=0.0687599;EFF=INTRON(MODIFIER||||411|LOC_Os03g26440|protein_coding|CODING|LOC_Os03g26440.1|6|1) FN-79.SNP.3:15120390 chr03:015120390 0 W/15120390-15120390 FN-79 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g26460 CS domain containing protein, putative, expressed SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN819-S.SNP.3:15122900 chr03:015122900 0 W/15122900-15122900 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3864-S.SNP.3:15126203 chr03:015126203 0 W/15126203-15126203 FN3864-S SNP C -> A AC=1;AN=158;BQB=0.815933;DP=2501;DP4=1172,1239,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.66004e-09;MQSB=0.232073;RPB=0.974974;SGB=64.5449;VDB=0.169584;EFF=INTRON(MODIFIER||||429|LOC_Os03g26480|protein_coding|CODING|LOC_Os03g26480.1|2|1) FN3864-S.SNP.3:15126204 chr03:015126204 0 W/15126204-15126204 FN3864-S SNP T -> C AC=1;AN=158;BQB=0.978049;DP=2498;DP4=1164,1228,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.81514e-10;MQSB=0.260152;RPB=0.699168;SGB=64.5449;VDB=0.118094;EFF=INTRON(MODIFIER||||429|LOC_Os03g26480|protein_coding|CODING|LOC_Os03g26480.1|2|1) FN-400.SNP.3:15130503 chr03:015130503 0 W/15130503-15130503 FN-400 Single Base Substitution C-A INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.3:15130503 chr03:015130503 0 W/15130503-15130503 FN400-S Single Base Substitution C-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN-400.SNP.3:15130504 chr03:015130504 0 W/15130504-15130504 FN-400 Single Base Substitution C-T INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.3:15130504 chr03:015130504 0 W/15130504-15130504 FN400-S Single Base Substitution C-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1228-S.SNP.3:15142298 chr03:015142298 0 W/15142298-15142298 FN1228-S Single Base Substitution T-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1429-S.SNP.3:15148438 chr03:015148438 0 W/15148438-15148438 FN1429-S Single Base Substitution G-A INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1233-S.SNP.3:15153931 chr03:015153931 0 W/15153931-15153931 FN1233-S Single Base Substitution C-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN2752-S.SNP.3:15157907 chr03:015157907 0 W/15157907-15157907 FN2752-S SNP G -> C AC=2;AN=200;BQB=0.895953;DP=5038;DP4=2237,2419,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.10656e-23;MQSB=0.946129;RPB=0.969087;SGB=86.7987;VDB=0.280001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.3:15162015 chr03:015162015 0 W/15162015-15162015 FN2440 SNP T -> A AC=2;AN=200;BQB=0.524196;DP=5231;DP4=2340,2624,15,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.31328e-24;MQSB=0.401121;RPB=0.950091;SGB=170.056;VDB=0.62902;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.3:15174038 chr03:015174038 0 W/15174038-15174038 FN3808-S SNP C -> T AC=2;AN=190;BQB=0.808594;DP=1905;DP4=939,877,3,9;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.134908;MQB=0.654184;MQSB=2.04803e-06;RPB=0.999973;SGB=49.0954;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.3:15174038 chr03:015174038 0 W/15174038-15174038 FN4234-S SNP C -> T AC=2;AN=170;BQB=0.825258;DP=1744;DP4=849,829,5,7;HOB=0.0232526;ICB=0.494188;MQ=28;MQ0F=0.159404;MQB=0.502039;MQSB=9.40841e-08;RPB=0.290667;SGB=47.8722;VDB=0.0155988;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.3:15182782 chr03:015182782 0 W/15182782-15182782 FN4120-S SNP C -> T AC=1;AN=182;BQB=0.948603;DP=3236;DP4=1550,1574,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.9101e-07;MQSB=0.983952;RPB=0.9939;SGB=44.1115;VDB=0.817242;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C991|1094|LOC_Os03g26570|protein_coding|CODING|LOC_Os03g26570.1|6|1) FN1395-S.SNP.3:15185307 chr03:015185307 0 W/15185307-15185307 FN1395-S Single Base Substitution T-A INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN3518-S.SNP.3:15197137 chr03:015197137 0 W/15197137-15197137 FN3518-S SNP T -> G AC=2;AN=188;BQB=0.889232;DP=2574;DP4=1187,1302,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.35763e-12;MQSB=0.998658;RPB=0.916449;SGB=89.8686;VDB=0.806649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.3:15207716 chr03:015207716 0 W/15207716-15207716 FN2475 SNP T -> C AC=1;AN=200;BQB=0.966566;DP=4549;DP4=1992,2182,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.45044e-10;MQSB=0.99062;RPB=0.881899;SGB=11.0951;VDB=0.404495;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.3:15211412 chr03:015211412 0 W/15211412-15211412 FN669-S Single Base Substitution G-A INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-283.SNP.3:15212263 chr03:015212263 0 W/15212263-15212263 FN-283 Single Base Substitution A-G INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN424-S.SNP.3:15224954 chr03:015224954 0 W/15224954-15224954 FN424-S Single Base Substitution T-G INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN737-S.SNP.3:15225444 chr03:015225444 0 W/15225444-15225444 FN737-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN1232-S.SNP.3:15235661 chr03:015235661 0 W/15235661-15235661 FN1232-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g26680 expressed protein SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2435.SNP.3:15239774 chr03:015239774 0 W/15239774-15239774 FN2435 SNP G -> A AC=1;AN=200;BQB=0.996891;DP=4737;DP4=2239,2266,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46878e-06;MQSB=0.991732;RPB=0.401422;SGB=33.0593;VDB=0.383964;EFF=INTRON(MODIFIER||||817|LOC_Os03g26690|protein_coding|CODING|LOC_Os03g26690.1|2|1) FN1446-S.SNP.3:15240194 chr03:015240194 0 W/15240194-15240194 FN1446-S Single Base Substitution C-T INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN351-S.SNP.3:15241479 chr03:015241479 0 W/15241479-15241479 FN351-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g26690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.3:15241481 chr03:015241481 0 W/15241481-15241481 FN351-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g26690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1658-S.SNP.3:15243749 chr03:015243749 0 W/15243749-15243749 FN1658-S SNP A -> T AC=2;AN=188;BQB=0.369462;DP=3707;DP4=1726,1912,25,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00026976;MQB=2.59719e-18;MQSB=0.90652;RPB=0.917705;SGB=-255.847;VDB=0.997888;EFF=INTRON(MODIFIER||||1227|LOC_Os03g26704|protein_coding|CODING|LOC_Os03g26704.1|7|1) FN3783-S.SNP.3:15245945 chr03:015245945 0 W/15245945-15245945 FN3783-S SNP C -> T AC=1;AN=190;BQB=0.476296;DP=2880;DP4=1321,1473,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000347222;MQB=2.02503e-06;MQSB=0.965632;RPB=0.939888;SGB=2.55724;VDB=0.539527;EFF=INTRON(MODIFIER||||1227|LOC_Os03g26704|protein_coding|CODING|LOC_Os03g26704.1|5|1) FN3567-S.SNP.3:15248569 chr03:015248569 0 W/15248569-15248569 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.99999;DP=2823;DP4=1301,1473,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00141693;MQB=2.08166e-10;MQSB=0.993064;RPB=0.981445;SGB=80.782;VDB=0.84478;EFF=INTRON(MODIFIER||||1227|LOC_Os03g26704|protein_coding|CODING|LOC_Os03g26704.1|2|1) FN1179-S.SNP.3:15255353 chr03:015255353 0 W/15255353-15255353 FN1179-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3418-S.SNP.3:15257192 chr03:015257192 0 W/15257192-15257192 FN3418-S SNP G -> T AC=1;AN=184;BQB=0.999032;DP=3161;DP4=1762,1320,3,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00047016;MQSB=0.538413;RPB=0.671403;SGB=21.6146;VDB=0.275478;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.3:15264946 chr03:015264946 0 W/15264946-15264946 FN425-S Single Base Substitution C-G INTRON HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1531-S.SNP.3:15265725 chr03:015265725 0 W/15265725-15265725 FN1531-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1537-S.SNP.3:15267826 chr03:015267826 0 W/15267826-15267826 FN1537-S Single Base Substitution C-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN489-S.SNP.3:15274316 chr03:015274316 0 W/15274316-15274316 FN489-S Single Base Substitution T-C INTERGENIC HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN569-S.SNP.3:15289691 chr03:015289691 0 W/15289691-15289691 FN569-S Single Base Substitution A-G INTERGENIC HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN703-S.SNP.3:15290720 chr03:015290720 0 W/15290720-15290720 FN703-S Single Base Substitution T-A INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2563-S.SNP.3:15298735 chr03:015298735 0 W/15298735-15298735 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.976662;DP=4283;DP4=2065,1948,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82485e-14;MQSB=0.987525;RPB=0.941402;SGB=72.5051;VDB=0.61613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.3:15298751 chr03:015298751 0 W/15298751-15298751 FN1099-S Single Base Substitution C-G INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN-356.SNP.3:15299632 chr03:015299632 0 W/15299632-15299632 FN-356 Single Base Substitution T-A INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2461.SNP.3:15303993 chr03:015303993 0 W/15303993-15303993 FN2461 SNP C -> A AC=1;AN=200;BQB=0.938787;DP=4413;DP4=2164,1935,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72357e-13;MQSB=0.622128;RPB=0.571262;SGB=65.5058;VDB=0.128416;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L56|235|LOC_Os03g26810|protein_coding|CODING|LOC_Os03g26810.1|2|1) FN-188.SNP.3:15304566 chr03:015304566 0 W/15304566-15304566 FN-188 Single Base Substitution G-A INTRON HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN-349.SNP.3:15312227 chr03:015312227 0 W/15312227-15312227 FN-349 Single Base Substitution G-T INTRON HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2474.SNP.3:15322381 chr03:015322381 0 W/15322381-15322381 FN2474 SNP G -> T AC=1;AN=200;BQB=0.916323;DP=4540;DP4=2302,1980,11,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.74956e-13;MQSB=0.970627;RPB=0.0952376;SGB=76.3213;VDB=0.0500372;EFF=UTR_3_PRIME(MODIFIER||91||332|LOC_Os03g26860|protein_coding|CODING|LOC_Os03g26860.1|3|1) FN-225.SNP.3:15334275 chr03:015334275 0 W/15334275-15334275 FN-225 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g26870 WD-40 repeat family protein, putative, expressed SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1047-S.SNP.3:15334337 chr03:015334337 0 W/15334337-15334337 FN1047-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g26870 WD-40 repeat family protein, putative, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2221-S.SNP.3:15337903 chr03:015337903 0 W/15337903-15337903 FN2221-S SNP T -> C AC=1;AN=190;BQB=0.970148;DP=4853;DP4=2223,2138,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77315e-12;MQSB=0.958133;RPB=0.853751;SGB=71.6393;VDB=0.406747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.3:15342943 chr03:015342943 0 W/15342943-15342943 FN1600-S Single Base Substitution A-C INTERGENIC Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1600-S.SNP.3:15342944 chr03:015342944 0 W/15342944-15342944 FN1600-S Single Base Substitution T-C INTERGENIC Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2768-S.SNP.3:15346527 chr03:015346527 0 W/15346527-15346527 FN2768-S SNP T -> A AC=1;AN=198;BQB=0.937218;DP=4538;DP4=1836,2434,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19007e-12;MQSB=0.900802;RPB=0.510091;SGB=61.7198;VDB=0.528523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.3:15348921 chr03:015348921 0 W/15348921-15348921 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.553569;DP=3300;DP4=1709,1541,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.69352e-08;MQSB=0.827377;RPB=0.859099;SGB=-14.0801;VDB=0.549216;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S149|800|LOC_Os03g26880|protein_coding|CODING|LOC_Os03g26880.1|3|1) FN805-S.SNP.3:15357264 chr03:015357264 0 W/15357264-15357264 FN805-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g26900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN754-S.SNP.3:15357961 chr03:015357961 0 W/15357961-15357961 FN754-S Single Base Substitution C-T INTRON HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN554-S.SNP.3:15358664 chr03:015358664 0 W/15358664-15358664 FN554-S Single Base Substitution A-G INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2348.SNP.3:15359454 chr03:015359454 0 W/15359454-15359454 FN2348 SNP G -> C AC=2;AN=192;BQB=0.866366;DP=4784;DP4=2230,2026,23,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.75377e-19;MQSB=0.978278;RPB=0.506447;SGB=87.8939;VDB=0.296963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.3:15360226 chr03:015360226 0 W/15360226-15360226 FN3360-S SNP T -> G AC=1;AN=184;BQB=0.999985;DP=3581;DP4=1699,1535,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.21445e-14;MQSB=0.94891;RPB=0.80863;SGB=45.9712;VDB=0.255622;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.3:15361193 chr03:015361193 0 W/15361193-15361193 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.451764;DP=5088;DP4=2136,2545,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33516e-12;MQSB=0.972181;RPB=0.986321;SGB=-8.87404;VDB=0.807176;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.3:15366141 chr03:015366141 0 W/15366141-15366141 FN3948-S SNP C -> T AC=1;AN=168;BQB=0.101075;DP=2820;DP4=1242,1413,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66573e-09;MQSB=0.925032;RPB=0.996434;SGB=79.3486;VDB=0.88485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.3:15370743 chr03:015370743 0 W/15370743-15370743 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.962112;DP=2950;DP4=1483,1369,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.76062e-07;MQSB=0.917979;RPB=0.746753;SGB=39.9877;VDB=0.034237;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.3:15375096 chr03:015375096 0 W/15375096-15375096 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.976959;DP=2597;DP4=1244,1270,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59418e-05;MQSB=0.932453;RPB=0.716815;SGB=30.8803;VDB=0.683425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.3:15380772 chr03:015380772 0 W/15380772-15380772 FN3377-S SNP C -> T AC=1;AN=184;BQB=0.332048;DP=2640;DP4=1330,1230,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00766914;MQSB=0.573607;RPB=0.447491;SGB=8.14452;VDB=0.772611;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.3:15385715 chr03:015385715 0 W/15385715-15385715 FN-256 Single Base Substitution A-T INTERGENIC HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2649-S.SNP.3:15388459 chr03:015388459 0 W/15388459-15388459 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.766274;DP=4709;DP4=1822,2465,8,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05981e-15;MQSB=0.0147152;RPB=0.991634;SGB=30.3571;VDB=0.734567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.3:15399620 chr03:015399620 0 W/15399620-15399620 FN3864-S SNP T -> G AC=1;AN=158;BQB=0.999909;DP=2570;DP4=1268,1165,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.21195e-08;MQSB=0.999042;RPB=0.224193;SGB=37.4429;VDB=0.598787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.3:15400713 chr03:015400713 0 W/15400713-15400713 FN3631-S SNP A -> G AC=1;AN=190;BQB=0.977875;DP=3107;DP4=1381,1620,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07574e-06;MQSB=0.91187;RPB=0.805783;SGB=13.4442;VDB=0.0754608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D100G|478|LOC_Os03g26930|protein_coding|CODING|LOC_Os03g26930.1|1|1) FN1720-S.SNP.3:15403024 chr03:015403024 0 W/15403024-15403024 FN1720-S SNP C -> A AC=1;AN=188;BQB=0.115957;DP=3296;DP4=1639,1617,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.23498e-12;MQSB=0.920917;RPB=0.993035;SGB=51.5091;VDB=0.590781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q410K|478|LOC_Os03g26930|protein_coding|CODING|LOC_Os03g26930.1|7|1) FN510-S.SNP.3:15409234 chr03:015409234 0 W/15409234-15409234 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-103.SNP.3:15412814 chr03:015412814 0 W/15412814-15412814 FN-103 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g26960 intron-binding protein aquarius, putative, expressed SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN1559-S.SNP.3:15413771 chr03:015413771 0 W/15413771-15413771 FN1559-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g26960 intron-binding protein aquarius, putative, expressed SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3934-S.SNP.3:15433205 chr03:015433205 0 W/15433205-15433205 FN3934-S SNP T -> A AC=2;AN=158;BQB=0.997195;DP=2401;DP4=1066,1230,16,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.30416e-18;MQSB=0.950325;RPB=0.509558;SGB=130.087;VDB=0.164358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.3:15440266 chr03:015440266 0 W/15440266-15440266 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.960622;DP=1417;DP4=203,1151,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.14785e-05;MQSB=0.589724;RPB=0.908261;SGB=26.3271;VDB=0.271748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.3:15443565 chr03:015443565 0 W/15443565-15443565 FN2559-S SNP G -> A AC=1;AN=198;BQB=0.0729123;DP=4534;DP4=1989,2248,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.98796e-06;MQSB=0.999882;RPB=0.22078;SGB=-32.9965;VDB=0.0224524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.3:15444097 chr03:015444097 0 W/15444097-15444097 FN1711-S SNP A -> C AC=1;AN=188;BQB=0.173124;DP=3591;DP4=1625,1948,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.72095e-05;MQSB=0.61878;RPB=0.91814;SGB=0.908326;VDB=0.0611046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.3:15448123 chr03:015448123 0 W/15448123-15448123 FN1119-S Single Base Substitution A-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-80.SNP.3:15451787 chr03:015451787 0 W/15451787-15451787 FN-80 Single Base Substitution T-A INTERGENIC HOMO SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN4049-S.SNP.3:15452947 chr03:015452947 0 W/15452947-15452947 FN4049-S SNP G -> T AC=1;AN=168;BQB=0.930039;DP=2547;DP4=1017,1394,3,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00146965;MQSB=0.677433;RPB=0.975832;SGB=25.5891;VDB=0.796257;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.3:15463908 chr03:015463908 0 W/15463908-15463908 FN927-S Single Base Substitution T-C INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1449-S.SNP.3:15469851 chr03:015469851 0 W/15469851-15469851 FN1449-S Single Base Substitution C-A INTRON HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2634-S.SNP.3:15472926 chr03:015472926 0 W/15472926-15472926 FN2634-S SNP C -> A AC=1;AN=200;BQB=0.504817;DP=5313;DP4=2532,2447,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80064e-19;MQSB=0.998879;RPB=0.257237;SGB=71.1676;VDB=0.547324;EFF=UTR_3_PRIME(MODIFIER||256||505|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.6|9|1),INTRON(MODIFIER||||572|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.1|9|1),INTRON(MODIFIER||||572|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.2|8|1),INTRON(MODIFIER||||571|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.3|9|1),INTRON(MODIFIER||||548|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.5|8|1),INTRON(MODIFIER||||364|LOC_Os03g27019|protein_coding|CODING|LOC_Os03g27019.7|9|1) FN-397.SNP.3:15477149 chr03:015477149 0 W/15477149-15477149 FN-397 Single Base Substitution C-G INTRON HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-187.SNP.3:15478414 chr03:015478414 0 W/15478414-15478414 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2681-S.SNP.3:15480831 chr03:015480831 0 W/15480831-15480831 FN2681-S SNP A -> C AC=2;AN=200;BQB=0.995138;DP=5271;DP4=2627,2394,46,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.53635e-42;MQSB=0.948331;RPB=0.503909;SGB=238.554;VDB=0.975512;EFF=INTRON(MODIFIER||||184|LOC_Os03g27040|protein_coding|CODING|LOC_Os03g27040.1|2|1) FN-156.SNP.3:15490187 chr03:015490187 0 W/15490187-15490187 FN-156 Single Base Substitution G-A INTERGENIC HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN982-S.SNP.3:15491938 chr03:015491938 0 W/15491938-15491938 FN982-S Single Base Substitution A-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN-281.SNP.3:15495240 chr03:015495240 0 W/15495240-15495240 FN-281 Single Base Substitution T-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1109-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN1109-S Single Base Substitution C-T INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1350-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN1350-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN1406-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN1406-S Single Base Substitution C-T INTERGENIC Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2266-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN2266-S SNP C -> T AC=2;AN=190;BQB=0.625988;DP=5210;DP4=1865,2937,12,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31208e-16;MQSB=0.854423;RPB=0.907297;SGB=153.834;VDB=0.973946;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN526-S Single Base Substitution C-T INTERGENIC HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN554-S.SNP.3:15497178 chr03:015497178 0 W/15497178-15497178 FN554-S Single Base Substitution C-T INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN-272.SNP.3:15500138 chr03:015500138 0 W/15500138-15500138 FN-272 Single Base Substitution T-C INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN917-S.SNP.3:15510037 chr03:015510037 0 W/15510037-15510037 FN917-S Single Base Substitution G-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1403-S.SNP.3:15515145 chr03:015515145 0 W/15515145-15515145 FN1403-S Single Base Substitution T-A INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1735-S.SNP.3:15523904 chr03:015523904 0 W/15523904-15523904 FN1735-S SNP C -> T AC=1;AN=186;BQB=0.513411;DP=1257;DP4=377,755,2,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.35204e-06;MQSB=0.914869;RPB=0.846231;SGB=35.3493;VDB=0.872557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.3:15523904 chr03:015523904 0 W/15523904-15523904 FN2781-S SNP C -> T AC=2;AN=198;BQB=0.966806;DP=3529;DP4=1560,1599,19,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.42033e-22;MQSB=0.99692;RPB=0.294553;SGB=205.783;VDB=0.85722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.3:15524635 chr03:015524635 0 W/15524635-15524635 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.819562;DP=3202;DP4=1431,1686,12,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.39296e-15;MQSB=0.795903;RPB=0.968314;SGB=103.307;VDB=0.930378;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.3:15525151 chr03:015525151 0 W/15525151-15525151 FN-277 Single Base Substitution G-A INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN2562-S.SNP.3:15533884 chr03:015533884 0 W/15533884-15533884 FN2562-S SNP C -> T AC=2;AN=198;BQB=0.964395;DP=3687;DP4=1453,1957,25,29;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000542446;MQB=1.05646e-25;MQSB=0.457692;RPB=0.325201;SGB=205.383;VDB=0.643741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.3:15535156 chr03:015535156 0 W/15535156-15535156 FN3373-S SNP C -> G AC=1;AN=184;BQB=0.938917;DP=2511;DP4=1052,1375,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.5575e-08;MQSB=0.959722;RPB=0.53114;SGB=48.7425;VDB=0.085396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.3:15536422 chr03:015536422 0 W/15536422-15536422 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.851242;DP=5968;DP4=2484,3283,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=33;MQ0F=0.0547922;MQB=0.399389;MQSB=0.23375;RPB=0.973791;SGB=23.8187;VDB=0.86937;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.3:15540149 chr03:015540149 0 W/15540149-15540149 FN229-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g27140 retrotransposon protein, putative, unclassified, expressed SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2588-S.SNP.3:15541006 chr03:015541006 0 W/15541006-15541006 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.966694;DP=4573;DP4=2518,1784,11,5;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0548874;MQB=0.412207;MQSB=0.0344408;RPB=0.991061;SGB=6.15916;VDB=0.209376;EFF=INTRON(MODIFIER||||1841|LOC_Os03g27140|protein_coding|CODING|LOC_Os03g27140.1|3|1) FN474-S.SNP.3:15542750 chr03:015542750 0 W/15542750-15542750 FN474-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g27140 retrotransposon protein, putative, unclassified, expressed SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN3795-S.SNP.3:15542964 chr03:015542964 0 W/15542964-15542964 FN3795-S SNP C -> T AC=1;AN=190;BQB=0.623821;DP=4773;DP4=2048,2556,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0247224;MQB=0.976496;MQSB=0.0846636;RPB=0.23222;SGB=28.7675;VDB=0.128697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.3:15543432 chr03:015543432 0 W/15543432-15543432 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.99306;DP=5852;DP4=2796,2648,25,27;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0237526;MQB=0.00048336;MQSB=3.47837e-24;RPB=0.333894;SGB=174.702;VDB=0.995234;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.3:15544095 chr03:015544095 0 W/15544095-15544095 FN983-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g27150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN_N1-26-1.SNP.3:15549508 chr03:015549508 0 W/15549508-15549508 FN_N1-26-1 Single Base Substitution G-C HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN-48.SNP.3:15558654 chr03:015558654 0 W/15558654-15558654 FN-48 Single Base Substitution C-T INTERGENIC Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2207-S.SNP.3:15559157 chr03:015559157 0 W/15559157-15559157 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.86509;DP=4819;DP4=2306,2228,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82739e-06;MQSB=0.798331;RPB=0.170089;SGB=25.439;VDB=0.209188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.3:15566908 chr03:015566908 0 W/15566908-15566908 FN3665-S SNP G -> T AC=1;AN=190;BQB=0.919809;DP=3056;DP4=1559,1384,16,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15348e-21;MQSB=0.808581;RPB=0.997725;SGB=172.05;VDB=0.382852;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.3:15577074 chr03:015577074 0 W/15577074-15577074 FN938-S Single Base Substitution T-C INTERGENIC HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-100.SNP.3:15581488 chr03:015581488 0 W/15581488-15581488 FN-100 Single Base Substitution G-C INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN3506-S.SNP.3:15582434 chr03:015582434 0 W/15582434-15582434 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.981276;DP=2704;DP4=1297,1297,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.61148e-06;MQSB=0.354358;RPB=0.861644;SGB=44.4357;VDB=0.504358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.3:15582881 chr03:015582881 0 W/15582881-15582881 FN1647-S Single Base Substitution A-G INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN-198.SNP.3:15583761 chr03:015583761 0 W/15583761-15583761 FN-198 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN1000-S.SNP.3:15584651 chr03:015584651 0 W/15584651-15584651 FN1000-S Single Base Substitution G-A INTERGENIC HOMO SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2500.SNP.3:15587520 chr03:015587520 0 W/15587520-15587520 FN2500 SNP A -> G AC=2;AN=200;BQB=0.994508;DP=4670;DP4=1987,2384,19,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.57873e-22;MQSB=0.520754;RPB=0.749935;SGB=81.5883;VDB=0.549168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.3:15587527 chr03:015587527 0 W/15587527-15587527 FN2500 SNP A -> C AC=2;AN=200;BQB=0.518371;DP=4738;DP4=2030,2281,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.24477e-21;MQSB=0.716714;RPB=0.896389;SGB=48.014;VDB=0.719466;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.3:15588400 chr03:015588400 0 W/15588400-15588400 FN1273-S Single Base Substitution C-A INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. W278-3-1.SNP.3:15597476 chr03:015597476 0 W/15597476-15597476 W278-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2484.SNP.3:15601254 chr03:015601254 0 W/15601254-15601254 FN2484 SNP C -> T AC=1;AN=200;BQB=0.861164;DP=4649;DP4=1868,2556,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.10889e-06;MQSB=0.979013;RPB=0.596864;SGB=29.4541;VDB=0.126388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.3:15601659 chr03:015601659 0 W/15601659-15601659 FN3834-S SNP A -> T AC=1;AN=190;BQB=0.803725;DP=3113;DP4=1522,1464,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.76595e-10;MQSB=0.9403;RPB=0.92076;SGB=50.3161;VDB=0.877924;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.3:15601663 chr03:015601663 0 W/15601663-15601663 FN3834-S SNP C -> A AC=1;AN=190;BQB=0.999391;DP=3129;DP4=1512,1518,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59993e-09;MQSB=0.975765;RPB=0.913689;SGB=58.2031;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.3:15609327 chr03:015609327 0 W/15609327-15609327 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.321793;DP=2813;DP4=1336,1381,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.13414e-07;MQSB=0.819293;RPB=0.780644;SGB=2.55724;VDB=0.831598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.3:15609684 chr03:015609684 0 W/15609684-15609684 FN1516-S Single Base Substitution C-G INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN1304-S.SNP.3:15609969 chr03:015609969 0 W/15609969-15609969 FN1304-S Single Base Substitution G-T INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2102-S.SNP.3:15621097 chr03:015621097 0 W/15621097-15621097 FN2102-S SNP T -> A AC=2;AN=168;BQB=0.455937;DP=3497;DP4=1739,1714,11,9;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=8.62595e-10;MQSB=0.418479;RPB=0.612816;SGB=9.91396;VDB=0.529761;EFF=INTRON(MODIFIER||||953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|15|1) FN2102-S.SNP.3:15621098 chr03:015621098 0 W/15621098-15621098 FN2102-S SNP C -> T AC=2;AN=168;BQB=0.0292701;DP=3493;DP4=1732,1717,13,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.36917e-09;MQSB=0.391606;RPB=0.0645904;SGB=-68.0681;VDB=0.423255;EFF=INTRON(MODIFIER||||953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|15|1) FN2102-S.SNP.3:15621099 chr03:015621099 0 W/15621099-15621099 FN2102-S SNP T -> G AC=2;AN=168;BQB=0.181068;DP=3494;DP4=1734,1721,11,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.82003e-08;MQSB=0.318457;RPB=0.117955;SGB=-14.0801;VDB=0.269728;EFF=INTRON(MODIFIER||||953|LOC_Os03g27250|protein_coding|CODING|LOC_Os03g27250.1|15|1) FN2397.SNP.3:15622059 chr03:015622059 0 W/15622059-15622059 FN2397 SNP C -> T AC=1;AN=200;BQB=0.585596;DP=4841;DP4=2179,2379,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.11308e-10;MQSB=0.878446;RPB=0.362244;SGB=29.4849;VDB=0.561782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:15623646 chr03:015623646 0 W/15623646-15623646 FN3694-S SNP A -> G AC=1;AN=190;BQB=0.460092;DP=2752;DP4=1321,1188,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1583e-07;MQSB=0.926349;RPB=0.834191;SGB=-15.4375;VDB=0.600856;EFF=INTRON(MODIFIER||||245|LOC_Os03g27260|protein_coding|CODING|LOC_Os03g27260.1|2|1) FN3670-S.SNP.3:15623790 chr03:015623790 0 W/15623790-15623790 FN3670-S SNP T -> G AC=1;AN=190;BQB=0.989549;DP=2887;DP4=1422,1356,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.55032e-05;MQSB=0.972057;RPB=0.848259;SGB=26.3271;VDB=0.308783;EFF=INTRON(MODIFIER||||245|LOC_Os03g27260|protein_coding|CODING|LOC_Os03g27260.1|2|1) W481-5-1.SNP.3:15636201 chr03:015636201 0 W/15636201-15636201 W481-5-1 Single Base Substitution C-G INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-399.SNP.3:15641115 chr03:015641115 0 W/15641115-15641115 FN-399 Single Base Substitution C-G INTRON HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.3:15641115 chr03:015641115 0 W/15641115-15641115 FN399-S Single Base Substitution C-G INTRON HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3297-S.SNP.3:15642342 chr03:015642342 0 W/15642342-15642342 FN3297-S SNP T -> G AC=1;AN=184;BQB=0.966834;DP=2862;DP4=1344,1403,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05406e-08;MQSB=0.989074;RPB=0.704794;SGB=62.3078;VDB=0.753481;EFF=UTR_3_PRIME(MODIFIER||121||169|LOC_Os03g27290|protein_coding|CODING|LOC_Os03g27290.1|5|1) FN-215.SNP.3:15644860 chr03:015644860 0 W/15644860-15644860 FN-215 Single Base Substitution G-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1615-S.SNP.3:15653777 chr03:015653777 0 W/15653777-15653777 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN4180-S.SNP.3:15653875 chr03:015653875 0 W/15653875-15653875 FN4180-S SNP C -> A AC=2;AN=170;BQB=0.670947;DP=2806;DP4=1403,1257,9,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.27859e-12;MQSB=0.936614;RPB=0.8833;SGB=58.9766;VDB=0.592858;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.3:15653906 chr03:015653906 0 W/15653906-15653906 FN450-S Single Base Substitution A-G INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN-167.SNP.3:15654858 chr03:015654858 0 W/15654858-15654858 FN-167 Single Base Substitution G-A INTRON HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3294-S.SNP.3:15668284 chr03:015668284 0 W/15668284-15668284 FN3294-S SNP C -> T AC=2;AN=184;BQB=0.0140855;DP=2756;DP4=1468,1188,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=0.00488341;MQSB=0.637584;RPB=0.320362;SGB=71.3514;VDB=0.0547946;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L20|417|LOC_Os03g27360|protein_coding|CODING|LOC_Os03g27360.1|1|1) FN4166-S.SNP.3:15668474 chr03:015668474 0 W/15668474-15668474 FN4166-S SNP G -> T AC=2;AN=170;BQB=0.27961;DP=1739;DP4=839,821,8,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=0.00138022;MQSB=0.896558;RPB=0.995169;SGB=47.8722;VDB=0.850567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A84S|417|LOC_Os03g27360|protein_coding|CODING|LOC_Os03g27360.1|1|1) FN2387.SNP.3:15680807 chr03:015680807 0 W/15680807-15680807 FN2387 SNP T -> A AC=1;AN=192;BQB=0.656173;DP=5490;DP4=2505,2312,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.52068e-10;MQSB=0.998576;RPB=0.979499;SGB=-37.0704;VDB=0.789377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.3:15681757 chr03:015681757 0 W/15681757-15681757 FN1416-S Single Base Substitution G-A INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN697-S.SNP.3:15689670 chr03:015689670 0 W/15689670-15689670 FN697-S Single Base Substitution T-C INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN2387.SNP.3:15691324 chr03:015691324 0 W/15691324-15691324 FN2387 SNP C -> T AC=1;AN=192;BQB=0.854323;DP=4864;DP4=2372,2195,18,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=6.00846e-13;MQSB=0.954373;RPB=0.320623;SGB=75.0722;VDB=0.629096;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.3:15694193 chr03:015694193 0 W/15694193-15694193 FN_546-3-1 Single Base Substitution A-C Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN-149.SNP.3:15695146 chr03:015695146 0 W/15695146-15695146 FN-149 Single Base Substitution C-T INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN3630-S.SNP.3:15707791 chr03:015707791 0 W/15707791-15707791 FN3630-S SNP A -> G AC=1;AN=190;BQB=0.793838;DP=2991;DP4=1248,1507,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.98222e-05;MQSB=0.999641;RPB=0.997262;SGB=15.9981;VDB=0.507257;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.3:15714837 chr03:015714837 0 W/15714837-15714837 FN4184-S SNP T -> C AC=2;AN=170;BQB=0.490878;DP=2324;DP4=1105,1125,9,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.61006e-08;MQSB=0.497506;RPB=0.0863931;SGB=29.6545;VDB=0.170987;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.3:15716077 chr03:015716077 0 W/15716077-15716077 FN775-S Single Base Substitution C-G INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2471.SNP.3:15718504 chr03:015718504 0 W/15718504-15718504 FN2471 SNP G -> C AC=1;AN=200;BQB=0.95885;DP=5567;DP4=2782,2495,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.47872e-15;MQSB=0.98251;RPB=0.897525;SGB=109.527;VDB=0.63622;EFF=SPLICE_SITE_REGION(LOW||||483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1),INTRON(MODIFIER||||483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1) FN2471.SNP.3:15718505 chr03:015718505 0 W/15718505-15718505 FN2471 SNP C -> A AC=1;AN=200;BQB=0.890014;DP=5566;DP4=2764,2412,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70939e-13;MQSB=0.999977;RPB=0.52255;SGB=83.5316;VDB=0.644735;EFF=SPLICE_SITE_REGION(LOW||||483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1),INTRON(MODIFIER||||483|LOC_Os03g27400|protein_coding|CODING|LOC_Os03g27400.1|5|1) FN1053-S.SNP.3:15719379 chr03:015719379 0 W/15719379-15719379 FN1053-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g27400 transposon protein, putative, unclassified, expressed SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1179-S.SNP.3:15728475 chr03:015728475 0 W/15728475-15728475 FN1179-S Single Base Substitution A-C INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1299-S.SNP.3:15732211 chr03:015732211 0 W/15732211-15732211 FN1299-S Single Base Substitution A-G INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3484-S.SNP.3:15736151 chr03:015736151 0 W/15736151-15736151 FN3484-S SNP T -> C AC=1;AN=184;BQB=0.968146;DP=2256;DP4=1029,1163,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.06958e-09;MQSB=0.999544;RPB=0.981708;SGB=57.786;VDB=0.68803;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.3:15737573 chr03:015737573 0 W/15737573-15737573 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN725-S.SNP.3:15737789 chr03:015737789 0 W/15737789-15737789 FN725-S Single Base Substitution A-C INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2399.SNP.3:15738599 chr03:015738599 0 W/15738599-15738599 FN2399 SNP C -> G AC=1;AN=200;BQB=0.501458;DP=4670;DP4=2277,2229,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20673e-09;MQSB=0.985142;RPB=0.896154;SGB=72.6852;VDB=0.783324;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.3:15742157 chr03:015742157 0 W/15742157-15742157 FN4093-S SNP T -> C AC=2;AN=182;BQB=0.680716;DP=2629;DP4=1702,852,9,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.32692e-07;MQSB=0.887045;RPB=0.956295;SGB=71.1765;VDB=0.489196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.3:15746664 chr03:015746664 0 W/15746664-15746664 FN2438 SNP T -> A AC=2;AN=200;BQB=0.718589;DP=4238;DP4=1763,2238,8,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.92303e-16;MQSB=0.835677;RPB=0.903302;SGB=52.9314;VDB=0.746128;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.3:15746664 chr03:015746664 0 W/15746664-15746664 FN909-S Single Base Substitution T-A INTERGENIC HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN3700-S.SNP.3:15747432 chr03:015747432 0 W/15747432-15747432 FN3700-S SNP C -> T AC=1;AN=190;BQB=0.633406;DP=2647;DP4=1413,1117,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.66997e-05;MQSB=0.970132;RPB=0.898059;SGB=53.6492;VDB=0.268133;EFF=UTR_5_PRIME(MODIFIER||794||203|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.1|1|1),UTR_5_PRIME(MODIFIER||1316||175|LOC_Os03g27450|protein_coding|CODING|LOC_Os03g27450.2|1|1) FN351-S.SNP.3:15750461 chr03:015750461 0 W/15750461-15750461 FN351-S Single Base Substitution G-T INTRON HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN-133.SNP.3:15756079 chr03:015756079 0 W/15756079-15756079 FN-133 Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN886-S.SNP.3:15756800 chr03:015756800 0 W/15756800-15756800 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN910-S.SNP.3:15761086 chr03:015761086 0 W/15761086-15761086 FN910-S Single Base Substitution G-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN765-S.SNP.3:15761652 chr03:015761652 0 W/15761652-15761652 FN765-S Single Base Substitution A-G INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1493-S.SNP.3:15762872 chr03:015762872 0 W/15762872-15762872 FN1493-S Single Base Substitution C-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN447-S.SNP.3:15766211 chr03:015766211 0 W/15766211-15766211 FN447-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g27480 OsSCP14 - Putative Serine Carboxypeptidase homologue, expressed SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN593-S.SNP.3:15774118 chr03:015774118 0 W/15774118-15774118 FN593-S Single Base Substitution A-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2261-S.SNP.3:15775735 chr03:015775735 0 W/15775735-15775735 FN2261-S SNP G -> T AC=1;AN=190;BQB=0.167809;DP=4635;DP4=2412,1947,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.47983e-16;MQSB=0.229379;RPB=0.404945;SGB=117.403;VDB=0.234724;EFF=INTRON(MODIFIER||||122|LOC_Os03g27490|protein_coding|CODING|LOC_Os03g27490.1|1|1) FN1197-S.SNP.3:15777508 chr03:015777508 0 W/15777508-15777508 FN1197-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1200-S.SNP.3:15779830 chr03:015779830 0 W/15779830-15779830 FN1200-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN351-S.SNP.3:15792848 chr03:015792848 0 W/15792848-15792848 FN351-S Single Base Substitution G-T INTRON HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2563-S.SNP.3:15794014 chr03:015794014 0 W/15794014-15794014 FN2563-S SNP T -> A AC=1;AN=198;BQB=0.96813;DP=3731;DP4=1940,1597,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000268025;MQB=2.31027e-09;MQSB=0.890729;RPB=0.774969;SGB=-35.8307;VDB=0.398318;EFF=INTRON(MODIFIER||||390|LOC_Os03g27530|protein_coding|CODING|LOC_Os03g27530.1|2|1) FN505-S.SNP.3:15797482 chr03:015797482 0 W/15797482-15797482 FN505-S Single Base Substitution T-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN466-S.SNP.3:15798064 chr03:015798064 0 W/15798064-15798064 FN466-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g27540 transposon protein, putative, Pong sub-class, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-309.SNP.3:15800405 chr03:015800405 0 W/15800405-15800405 FN-309 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2265-S.SNP.3:15802928 chr03:015802928 0 W/15802928-15802928 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.82437;DP=4319;DP4=2232,1770,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13445e-10;MQSB=0.96065;RPB=0.999696;SGB=46.6446;VDB=0.337235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.3:15804765 chr03:015804765 0 W/15804765-15804765 FN2461 SNP T -> C AC=1;AN=200;BQB=0.517094;DP=4705;DP4=2194,2320,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.8672e-14;MQSB=0.71506;RPB=0.947747;SGB=95.7111;VDB=0.0170598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.3:15805528 chr03:015805528 0 W/15805528-15805528 FN1472-S Single Base Substitution T-G INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2447.SNP.3:15806739 chr03:015806739 0 W/15806739-15806739 FN2447 SNP C -> T AC=1;AN=200;BQB=0.223249;DP=4634;DP4=2104,2254,10,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.1297e-11;MQSB=0.630704;RPB=0.0392137;SGB=61.9006;VDB=0.0115666;EFF=INTRON(MODIFIER||||136|LOC_Os03g27560|protein_coding|CODING|LOC_Os03g27560.1|1|1) FN3506-S.SNP.3:15809082 chr03:015809082 0 W/15809082-15809082 FN3506-S SNP A -> G AC=2;AN=188;BQB=0.962752;DP=2042;DP4=1331,633,15,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.61217e-14;MQSB=0.996812;RPB=0.202751;SGB=94.4119;VDB=0.0708775;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.3:15814378 chr03:015814378 0 W/15814378-15814378 FN-110 Single Base Substitution G-A INTERGENIC HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN428-S.SNP.3:15816535 chr03:015816535 0 W/15816535-15816535 FN428-S Single Base Substitution C-G INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2572-S.SNP.3:15816794 chr03:015816794 0 W/15816794-15816794 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.856597;DP=4351;DP4=1973,2070,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.49976e-11;MQSB=0.894606;RPB=0.972498;SGB=15.7299;VDB=0.605821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN-248 Single Base Substitution C-T INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2085-S.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN2085-S SNP C -> T AC=2;AN=168;BQB=0.699651;DP=3079;DP4=1501,1491,26,15;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000324781;MQB=2.50197e-08;MQSB=0.000279174;RPB=0.996891;SGB=-5.46373;VDB=0.239163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN2422 SNP C -> T AC=2;AN=200;BQB=0.968964;DP=4510;DP4=2143,2069,21,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000221729;MQB=2.22314e-25;MQSB=0.893072;RPB=0.83092;SGB=115.456;VDB=0.882845;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN244-S Single Base Substitution C-T INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3534-S.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN3534-S SNP C -> T AC=2;AN=188;BQB=0.819303;DP=3047;DP4=1573,1370,16,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000328192;MQB=2.06568e-17;MQSB=0.998041;RPB=0.451977;SGB=144.388;VDB=0.601316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN3759-S SNP C -> T AC=1;AN=190;BQB=0.645828;DP=2844;DP4=1418,1300,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000351617;MQB=4.29479e-06;MQSB=0.999523;RPB=0.9999;SGB=62.7569;VDB=0.381728;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.3:15822283 chr03:015822283 0 W/15822283-15822283 FN_1017-1 Single Base Substitution C-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-299.SNP.3:15823492 chr03:015823492 0 W/15823492-15823492 FN-299 Single Base Substitution G-T INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-299.SNP.3:15823493 chr03:015823493 0 W/15823493-15823493 FN-299 Single Base Substitution C-T INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-196.SNP.3:15824415 chr03:015824415 0 W/15824415-15824415 FN-196 Single Base Substitution C-T INTRON HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-396.SNP.3:15828726 chr03:015828726 0 W/15828726-15828726 FN-396 Single Base Substitution G-T INTRON HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2113-S.SNP.3:15829530 chr03:015829530 0 W/15829530-15829530 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.00766861;DP=3765;DP4=2020,1709,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48815e-05;MQSB=0.99171;RPB=0.445464;SGB=-154.912;VDB=0.755686;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.3:15843694 chr03:015843694 0 W/15843694-15843694 FN3918-S SNP T -> G AC=1;AN=158;BQB=0.667135;DP=3060;DP4=1347,1538,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.15268e-06;MQSB=0.855188;RPB=0.434398;SGB=0.716704;VDB=0.46067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1523-S.SNP.3:15847380 chr03:015847380 0 W/15847380-15847380 FN1523-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN715-S.SNP.3:15847656 chr03:015847656 0 W/15847656-15847656 FN715-S Single Base Substitution T-A INTERGENIC HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN715-S.SNP.3:15847657 chr03:015847657 0 W/15847657-15847657 FN715-S Single Base Substitution G-A INTERGENIC HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1115-S.SNP.3:15857618 chr03:015857618 0 W/15857618-15857618 FN1115-S Single Base Substitution G-T INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1333-S.SNP.3:15857761 chr03:015857761 0 W/15857761-15857761 FN1333-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1636-S.SNP.3:15858766 chr03:015858766 0 W/15858766-15858766 FN1636-S Single Base Substitution T-C INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN-207.SNP.3:15865877 chr03:015865877 0 W/15865877-15865877 FN-207 Single Base Substitution A-G INTRON HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-207.SNP.3:15865878 chr03:015865878 0 W/15865878-15865878 FN-207 Single Base Substitution A-T INTRON HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2229-S.SNP.3:15867260 chr03:015867260 0 W/15867260-15867260 FN2229-S SNP A -> G AC=1;AN=190;BQB=0.704347;DP=5015;DP4=2618,1975,29,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93314e-24;MQSB=0.972701;RPB=0.955278;SGB=156.932;VDB=0.94412;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.3:15867705 chr03:015867705 0 W/15867705-15867705 FN-126 Single Base Substitution A-G INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2325.SNP.3:15872957 chr03:015872957 0 W/15872957-15872957 FN2325 SNP G -> A AC=2;AN=192;BQB=0.886608;DP=5151;DP4=2360,2402,18,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.81778e-23;MQSB=0.95981;RPB=0.154429;SGB=41.7705;VDB=0.568467;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.3:15896144 chr03:015896144 0 W/15896144-15896144 FN4260-S SNP T -> C AC=1;AN=170;BQB=0.999636;DP=2330;DP4=1179,1082,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00128755;MQB=1.74904e-10;MQSB=0.886901;RPB=0.852078;SGB=92.2986;VDB=0.886772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D112G|1640|LOC_Os03g27730|protein_coding|CODING|LOC_Os03g27730.1|1|1) FN2180-S.SNP.3:15896194 chr03:015896194 0 W/15896194-15896194 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.816834;DP=4741;DP4=2430,2078,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00506222;MQB=6.9136e-06;MQSB=2.71387e-05;RPB=0.86176;SGB=39.6545;VDB=0.285527;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q95|1640|LOC_Os03g27730|protein_coding|CODING|LOC_Os03g27730.1|1|1) FN828-S.SNP.3:15897234 chr03:015897234 0 W/15897234-15897234 FN828-S Single Base Substitution C-T INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN2731-S.SNP.3:15899016 chr03:015899016 0 W/15899016-15899016 FN2731-S SNP G -> C AC=2;AN=200;BQB=0.444583;DP=4647;DP4=2243,2135,30,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.23486e-26;MQSB=0.688319;RPB=0.880035;SGB=59.2502;VDB=0.161404;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.3:15899406 chr03:015899406 0 W/15899406-15899406 W500-4-7-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN-85.SNP.3:15900978 chr03:015900978 0 W/15900978-15900978 FN-85 Single Base Substitution A-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN474-S.SNP.3:15909072 chr03:015909072 0 W/15909072-15909072 FN474-S Single Base Substitution G-T INTRON HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN-161.SNP.3:15914331 chr03:015914331 0 W/15914331-15914331 FN-161 Single Base Substitution C-A INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3659-S.SNP.3:15921457 chr03:015921457 0 W/15921457-15921457 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.997713;DP=3051;DP4=1353,1593,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.46235e-10;MQSB=0.98968;RPB=0.760433;SGB=71.8647;VDB=0.0260006;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.3:15929047 chr03:015929047 0 W/15929047-15929047 FN795-S Single Base Substitution C-T INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN3824-S.SNP.3:15930660 chr03:015930660 0 W/15930660-15930660 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.908978;DP=2444;DP4=958,1404,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18666e-06;MQSB=0.989554;RPB=0.373587;SGB=44.5415;VDB=0.292426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.3:15940993 chr03:015940993 0 W/15940993-15940993 FN2324 SNP A -> T AC=1;AN=192;BQB=0.46581;DP=4632;DP4=2388,1895,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.46197e-15;MQSB=0.903032;RPB=0.596589;SGB=-40.9913;VDB=0.679109;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gAa|V259E|776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|3|1) FN1394-S.SNP.3:15942948 chr03:015942948 0 W/15942948-15942948 FN1394-S Single Base Substitution T-A INTRON HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2290.SNP.3:15942948 chr03:015942948 0 W/15942948-15942948 FN2290 SNP T -> A AC=1;AN=192;BQB=0.781019;DP=4668;DP4=2092,2115,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.34651e-13;MQSB=0.959419;RPB=0.925814;SGB=26.127;VDB=0.843375;EFF=INTRON(MODIFIER||||776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|1|1) FN3502-S.SNP.3:15942948 chr03:015942948 0 W/15942948-15942948 FN3502-S SNP T -> A AC=1;AN=188;BQB=0.954536;DP=2945;DP4=1472,1376,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.43534e-06;MQSB=0.907576;RPB=0.528587;SGB=53.5223;VDB=0.556519;EFF=INTRON(MODIFIER||||776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|1|1) FN4206-S.SNP.3:15942948 chr03:015942948 0 W/15942948-15942948 FN4206-S SNP T -> A AC=2;AN=170;BQB=0.68908;DP=2649;DP4=1296,1231,7,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.24339e-12;MQSB=0.990889;RPB=0.387205;SGB=78.9707;VDB=0.423267;EFF=INTRON(MODIFIER||||776|LOC_Os03g27800|protein_coding|CODING|LOC_Os03g27800.1|1|1) FN951-S.SNP.3:15945220 chr03:015945220 0 W/15945220-15945220 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN4016-S.SNP.3:15952670 chr03:015952670 0 W/15952670-15952670 FN4016-S SNP C -> T AC=2;AN=168;BQB=0.888433;DP=2258;DP4=1073,1073,17,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.3198e-13;MQSB=0.00529915;RPB=0.0529208;SGB=89.641;VDB=0.562645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.3:15958139 chr03:015958139 0 W/15958139-15958139 FN1400-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1400-S.SNP.3:15958140 chr03:015958140 0 W/15958140-15958140 FN1400-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN521-S.SNP.3:15960352 chr03:015960352 0 W/15960352-15960352 FN521-S Single Base Substitution A-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2491.SNP.3:15960548 chr03:015960548 0 W/15960548-15960548 FN2491 SNP C -> G AC=1;AN=200;BQB=0.941311;DP=4681;DP4=2308,2148,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49579e-05;MQSB=0.946499;RPB=0.784443;SGB=25.849;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.3:15972248 chr03:015972248 0 W/15972248-15972248 FN1315-S Single Base Substitution C-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN681-S.SNP.3:15972298 chr03:015972298 0 W/15972298-15972298 FN681-S Single Base Substitution C-T INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3659-S.SNP.3:15976152 chr03:015976152 0 W/15976152-15976152 FN3659-S SNP A -> G AC=1;AN=190;BQB=0.999746;DP=2786;DP4=1064,1570,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92168e-07;MQSB=0.917505;RPB=0.569579;SGB=36.1006;VDB=0.788814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.3:15987267 chr03:015987267 0 W/15987267-15987267 FN1401-S Single Base Substitution G-A INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-187.SNP.3:15993566 chr03:015993566 0 W/15993566-15993566 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1276-S.SNP.3:15999807 chr03:015999807 0 W/15999807-15999807 FN1276-S Single Base Substitution G-A STOP_GAINED HET LOC_Os03g27850 expressed protein SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2380.SNP.3:16001279 chr03:016001279 0 W/16001279-16001279 FN2380 SNP T -> A AC=2;AN=192;BQB=0.225049;DP=4274;DP4=1895,2065,13,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.40799e-14;MQSB=0.994538;RPB=0.522667;SGB=-78.8574;VDB=0.517449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.3:16001464 chr03:016001464 0 W/16001464-16001464 FN1113-S Single Base Substitution C-G INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN-257.SNP.3:16011672 chr03:016011672 0 W/16011672-16011672 FN-257 Single Base Substitution G-T INTRON HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3670-S.SNP.3:16012321 chr03:016012321 0 W/16012321-16012321 FN3670-S SNP T -> C AC=1;AN=190;BQB=0.942076;DP=2136;DP4=1119,937,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.19598e-07;MQSB=0.905455;RPB=0.997137;SGB=44.5415;VDB=0.281503;EFF=INTRON(MODIFIER||||899|LOC_Os03g27870|protein_coding|CODING|LOC_Os03g27870.1|7|1) FN767-S.SNP.3:16015958 chr03:016015958 0 W/16015958-16015958 FN767-S Single Base Substitution G-T INTERGENIC HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN1188-S.SNP.3:16024910 chr03:016024910 0 W/16024910-16024910 FN1188-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2660-S.SNP.3:16034727 chr03:016034727 0 W/16034727-16034727 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.779351;DP=3658;DP4=2026,1252,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000273373;MQB=5.50237e-09;MQSB=0.101538;RPB=0.945927;SGB=-35.3156;VDB=0.0889505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.3:16046690 chr03:016046690 0 W/16046690-16046690 FN1635-S SNP C -> A AC=1;AN=188;BQB=0.00143992;DP=3689;DP4=1856,1790,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.49898e-06;MQSB=0.979244;RPB=0.783573;SGB=-153.343;VDB=0.976314;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.3:16057005 chr03:016057005 0 W/16057005-16057005 FN598-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g27950 Ser/Thr protein phosphatase family protein, putative, expressed SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3667-S.SNP.3:16058877 chr03:016058877 0 W/16058877-16058877 FN3667-S SNP A -> G AC=1;AN=190;BQB=0.986099;DP=2763;DP4=1328,1352,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.0243e-05;MQSB=0.971485;RPB=0.650666;SGB=26.3271;VDB=0.571008;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.3:16067074 chr03:016067074 0 W/16067074-16067074 FN882-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g27970 WD domain, G-beta repeat domain containing protein, expressed SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN-39.SNP.3:16078521 chr03:016078521 0 W/16078521-16078521 FN-39 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN836-S.SNP.3:16088116 chr03:016088116 0 W/16088116-16088116 FN836-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3970-S.SNP.3:16102576 chr03:016102576 0 W/16102576-16102576 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.778027;DP=2565;DP4=1229,1215,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00623782;MQB=4.3787e-07;MQSB=0.487724;RPB=0.5824;SGB=74.3269;VDB=0.691215;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1768|1975|LOC_Os03g28010|protein_coding|CODING|LOC_Os03g28010.1|11|1) FN1617-S.SNP.3:16105416 chr03:016105416 0 W/16105416-16105416 FN1617-S Single Base Substitution C-T STOP_GAINED Homo LOC_Os03g28020 retrotransposon protein, putative, unclassified, expressed SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2662-S.SNP.3:16106200 chr03:016106200 0 W/16106200-16106200 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.896697;DP=4652;DP4=2231,2165,9,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00773861;MQB=0.914187;MQSB=0.477217;RPB=0.345392;SGB=81.8956;VDB=0.797521;EFF=INTRON(MODIFIER||||539|LOC_Os03g28020|protein_coding|CODING|LOC_Os03g28020.1|2|1) FN-272.SNP.3:16106576 chr03:016106576 0 W/16106576-16106576 FN-272 Single Base Substitution T-C INTRON HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1757-S.SNP.3:16109734 chr03:016109734 0 W/16109734-16109734 FN1757-S SNP T -> C AC=1;AN=188;BQB=0.296926;DP=3563;DP4=1627,1907,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45456e-08;MQSB=0.916683;RPB=0.345203;SGB=11.7114;VDB=0.982547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.3:16112905 chr03:016112905 0 W/16112905-16112905 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.99749;DP=4844;DP4=2540,2140,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.28748e-17;MQSB=1;RPB=0.988839;SGB=127.947;VDB=0.535487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.3:16122771 chr03:016122771 0 W/16122771-16122771 FN2670-S SNP C -> T AC=2;AN=200;BQB=0.956033;DP=4849;DP4=2338,2194,31,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07496e-36;MQSB=0.877864;RPB=0.788049;SGB=220.528;VDB=0.780383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.3:16136843 chr03:016136843 0 W/16136843-16136843 FN1337-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2223-S.SNP.3:16137757 chr03:016137757 0 W/16137757-16137757 FN2223-S SNP G -> T AC=2;AN=190;BQB=0.962316;DP=4343;DP4=1657,2347,22,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.17822e-21;MQSB=0.310602;RPB=0.189998;SGB=146.271;VDB=0.62426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.3:16141028 chr03:016141028 0 W/16141028-16141028 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.816503;DP=4551;DP4=2143,2112,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.89584e-13;MQSB=0.105937;RPB=0.684537;SGB=103.624;VDB=0.489577;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.3:16141215 chr03:016141215 0 W/16141215-16141215 FN1292-S Single Base Substitution G-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1541-S.SNP.3:16142843 chr03:016142843 0 W/16142843-16142843 FN1541-S Single Base Substitution C-T INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN230-S.SNP.3:16142902 chr03:016142902 0 W/16142902-16142902 FN230-S Single Base Substitution G-A INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN897-S.SNP.3:16145161 chr03:016145161 0 W/16145161-16145161 FN897-S Single Base Substitution C-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN764-S.SNP.3:16146175 chr03:016146175 0 W/16146175-16146175 FN764-S Single Base Substitution C-T INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2330.SNP.3:16148401 chr03:016148401 0 W/16148401-16148401 FN2330 SNP G -> A AC=2;AN=192;BQB=0.0699559;DP=4945;DP4=2161,2493,22,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.0495e-27;MQSB=0.993823;RPB=0.924281;SGB=113.537;VDB=0.751277;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.3:16156054 chr03:016156054 0 W/16156054-16156054 FN-162 Single Base Substitution A-T INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2713-S.SNP.3:16167086 chr03:016167086 0 W/16167086-16167086 FN2713-S SNP T -> C AC=1;AN=200;BQB=0.302309;DP=4654;DP4=1904,2503,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16535e-14;MQSB=0.864393;RPB=0.19917;SGB=123.342;VDB=0.477352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.3:16174817 chr03:016174817 0 W/16174817-16174817 FN3842-S SNP G -> A AC=1;AN=190;BQB=0.971284;DP=2917;DP4=1319,1508,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.88266e-08;MQSB=0.836654;RPB=0.687158;SGB=32.5467;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.3:16176870 chr03:016176870 0 W/16176870-16176870 FN2441 SNP G -> C AC=1;AN=200;BQB=0.900951;DP=5095;DP4=2535,2226,16,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196271;MQB=4.42639e-19;MQSB=0.0475862;RPB=0.89978;SGB=38.383;VDB=0.252531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.3:16178785 chr03:016178785 0 W/16178785-16178785 FN2626-S SNP C -> T AC=1;AN=200;BQB=0.671673;DP=4491;DP4=2295,1983,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.6912e-07;MQSB=0.991297;RPB=0.413246;SGB=49.6594;VDB=0.832668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.3:16178913 chr03:016178913 0 W/16178913-16178913 FN3886-S SNP T -> C AC=1;AN=158;BQB=0.933687;DP=2348;DP4=1246,1006,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.00865e-08;MQSB=0.999325;RPB=0.866046;SGB=34.0735;VDB=0.33395;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.3:16183875 chr03:016183875 0 W/16183875-16183875 FN4082-S SNP T -> G AC=1;AN=182;BQB=0.967214;DP=2572;DP4=872,1601,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.53913e-08;MQSB=0.865315;RPB=0.841203;SGB=18.1224;VDB=0.314346;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|10|1),INTRON(MODIFIER||||1818|LOC_Os03g28140|protein_coding|CODING|LOC_Os03g28140.1|9|1);LOF=(LOC_Os03g28140|LOC_Os03g28140|1|1.00) FN1099-S.SNP.3:16189414 chr03:016189414 0 W/16189414-16189414 FN1099-S Single Base Substitution T-C INTRON HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2300.SNP.3:16194536 chr03:016194536 0 W/16194536-16194536 FN2300 SNP C -> T AC=2;AN=192;BQB=0.864163;DP=4934;DP4=2285,2269,23,13;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=8.69241e-09;MQSB=0.999381;RPB=0.519746;SGB=-44.0408;VDB=0.328129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.3:16195498 chr03:016195498 0 W/16195498-16195498 FN3357-S SNP A -> G AC=2;AN=184;BQB=0.990109;DP=2727;DP4=1176,1154,10,19;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.28154e-11;MQSB=0.611969;RPB=0.8515;SGB=-41.9689;VDB=0.204102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.3:16196465 chr03:016196465 0 W/16196465-16196465 FN1446-S Single Base Substitution G-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1465-S.SNP.3:16196949 chr03:016196949 0 W/16196949-16196949 FN1465-S Single Base Substitution C-T INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3571-S.SNP.3:16198436 chr03:016198436 0 W/16198436-16198436 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.998367;DP=3228;DP4=1289,1821,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.18607e-07;MQSB=0.991305;RPB=0.381486;SGB=53.5223;VDB=0.293274;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.3:16202645 chr03:016202645 0 W/16202645-16202645 W464-2-1 Single Base Substitution C-A INTERGENIC HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN730-S.SNP.3:16203082 chr03:016203082 0 W/16203082-16203082 FN730-S Single Base Substitution G-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN2352.SNP.3:16205268 chr03:016205268 0 W/16205268-16205268 FN2352 SNP A -> G AC=1;AN=192;BQB=0.968521;DP=4602;DP4=1888,2377,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.73452e-14;MQSB=0.854266;RPB=0.33508;SGB=46.8644;VDB=0.0846254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.3:16207434 chr03:016207434 0 W/16207434-16207434 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.914969;DP=2946;DP4=1499,1352,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01717e-09;MQSB=0.244312;RPB=0.72764;SGB=46.7622;VDB=0.647376;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.3:16209305 chr03:016209305 0 W/16209305-16209305 FN858-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3373-S.SNP.3:16212750 chr03:016212750 0 W/16212750-16212750 FN3373-S SNP T -> A AC=1;AN=184;BQB=0.633438;DP=2708;DP4=1165,1254,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0712e-06;MQSB=0.622683;RPB=0.156184;SGB=25.1826;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.3:16213515 chr03:016213515 0 W/16213515-16213515 FN2118-S SNP G -> T AC=1;AN=168;BQB=0.00875372;DP=3619;DP4=1650,1934,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.4629e-05;MQSB=0.983068;RPB=0.817289;SGB=-166.629;VDB=0.375792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.3:16214150 chr03:016214150 0 W/16214150-16214150 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3667-S.SNP.3:16217767 chr03:016217767 0 W/16217767-16217767 FN3667-S SNP C -> T AC=2;AN=190;BQB=0.864366;DP=1959;DP4=932,945,9,8;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.014293;MQB=0.000206819;MQSB=1.24186e-09;RPB=0.815309;SGB=71.8647;VDB=0.5994;EFF=UTR_5_PRIME(MODIFIER||405||121|LOC_Os03g28175|protein_coding|CODING|LOC_Os03g28175.1|1|1) FN923-S.SNP.3:16221483 chr03:016221483 0 W/16221483-16221483 FN923-S Single Base Substitution G-A INTRON HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN1764-S.SNP.3:16222049 chr03:016222049 0 W/16222049-16222049 FN1764-S SNP T -> C AC=1;AN=188;BQB=0.294537;DP=2503;DP4=1218,1263,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0115917;MQSB=0.943226;RPB=0.581102;SGB=-17.7162;VDB=0.0491895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.3:16224567 chr03:016224567 0 W/16224567-16224567 FN1412-S Single Base Substitution A-G INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2749-S.SNP.3:16236892 chr03:016236892 0 W/16236892-16236892 FN2749-S SNP A -> G AC=1;AN=200;BQB=0.219176;DP=4501;DP4=2301,1937,10,11;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.00777605;MQB=0.512883;MQSB=0;RPB=0.718032;SGB=14.3054;VDB=0.245878;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I1431V|1468|LOC_Os03g28204|protein_coding|CODING|LOC_Os03g28204.1|13|1) FN4156-S.SNP.3:16236892 chr03:016236892 0 W/16236892-16236892 FN4156-S SNP A -> G AC=1;AN=170;BQB=0.432415;DP=2456;DP4=1318,1062,7,11;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.00162866;MQB=0.391566;MQSB=2.67734e-20;RPB=0.993682;SGB=29.6545;VDB=0.844448;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I1431V|1468|LOC_Os03g28204|protein_coding|CODING|LOC_Os03g28204.1|13|1) FN3935-S.SNP.3:16241302 chr03:016241302 0 W/16241302-16241302 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.934884;DP=2403;DP4=1186,1100,17,22;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=3.91038e-13;MQSB=0.0714855;RPB=0.979696;SGB=78.316;VDB=0.756347;EFF=INTRON(MODIFIER||||293|LOC_Os03g28230|protein_coding|CODING|LOC_Os03g28230.1|1|1) FN1069-S.SNP.3:16241562 chr03:016241562 0 W/16241562-16241562 FN1069-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g28230 transposon protein, putative, unclassified, expressed SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2487.SNP.3:16242158 chr03:016242158 0 W/16242158-16242158 FN2487 SNP C -> T AC=1;AN=200;BQB=0.502967;DP=3834;DP4=1979,1668,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25583e-06;MQSB=0.999402;RPB=0.89808;SGB=40.4492;VDB=0.877807;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.3:16246022 chr03:016246022 0 W/16246022-16246022 FN-152 Single Base Substitution T-G INTERGENIC HOMO SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1573-S.SNP.3:16249070 chr03:016249070 0 W/16249070-16249070 FN1573-S Single Base Substitution T-G INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN_N1-119-1.SNP.3:16249333 chr03:016249333 0 W/16249333-16249333 FN_N1-119-1 Single Base Substitution G-A Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3815-S.SNP.3:16251751 chr03:016251751 0 W/16251751-16251751 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.903003;DP=2670;DP4=1296,1261,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57467e-08;MQSB=0.93682;RPB=0.227164;SGB=32.5467;VDB=0.0693263;EFF=INTRON(MODIFIER||||145|LOC_Os03g28260|protein_coding|CODING|LOC_Os03g28260.1|1|1) FN1483-S.SNP.3:16253054 chr03:016253054 0 W/16253054-16253054 FN1483-S Single Base Substitution C-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2653-S.SNP.3:16253217 chr03:016253217 0 W/16253217-16253217 FN2653-S SNP T -> C AC=1;AN=200;BQB=0.965488;DP=4500;DP4=1969,2120,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.56135e-10;MQSB=0.255013;RPB=0.737052;SGB=-63.8899;VDB=0.702193;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.3:16256420 chr03:016256420 0 W/16256420-16256420 FN971-S Single Base Substitution G-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1433-S.SNP.3:16260535 chr03:016260535 0 W/16260535-16260535 FN1433-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1700-S.SNP.3:16268702 chr03:016268702 0 W/16268702-16268702 FN1700-S SNP A -> C AC=2;AN=188;BQB=0.00495439;DP=3984;DP4=1702,2242,7,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.54661e-10;MQSB=0.999192;RPB=0.266308;SGB=61.6823;VDB=0.197723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.3:16275942 chr03:016275942 0 W/16275942-16275942 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3387-S.SNP.3:16280520 chr03:016280520 0 W/16280520-16280520 FN3387-S SNP A -> T AC=1;AN=184;BQB=0.999547;DP=3001;DP4=1519,1341,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.67242e-10;MQSB=0.907016;RPB=0.796256;SGB=23.2751;VDB=0.365447;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S50R|104|LOC_Os03g28289|protein_coding|CODING|LOC_Os03g28289.1|2|1) FN-157.SNP.3:16291197 chr03:016291197 0 W/16291197-16291197 FN-157 Single Base Substitution C-A INTERGENIC HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2279-S.SNP.3:16309531 chr03:016309531 0 W/16309531-16309531 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.734252;DP=5284;DP4=2555,2299,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0357684;MQB=0.109038;MQSB=5.97688e-14;RPB=0.960112;SGB=-35.8783;VDB=0.645118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-372.SNP.3:16310635 chr03:016310635 0 W/16310635-16310635 FN-372 Single Base Substitution T-G INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3860-S.SNP.3:16321309 chr03:016321309 0 W/16321309-16321309 FN3860-S SNP G -> A AC=1;AN=158;BQB=0.979556;DP=1663;DP4=708,852,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.02632e-07;MQSB=0.609525;RPB=0.716955;SGB=34.0735;VDB=0.873662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.3:16323612 chr03:016323612 0 W/16323612-16323612 FN2600-S SNP T -> C AC=1;AN=198;BQB=0.837323;DP=4168;DP4=1766,2228,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.87598e-15;MQSB=0.348363;RPB=0.666304;SGB=-7.88458;VDB=0.0117157;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.3:16325271 chr03:016325271 0 W/16325271-16325271 FN982-S Single Base Substitution T-A INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN1103-S.SNP.3:16331284 chr03:016331284 0 W/16331284-16331284 FN1103-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g28350 expressed protein SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3659-S.SNP.3:16332736 chr03:016332736 0 W/16332736-16332736 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.959433;DP=1766;DP4=811,841,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0072357;MQSB=1.24987e-05;RPB=0.858372;SGB=26.3271;VDB=0.724891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.3:16335083 chr03:016335083 0 W/16335083-16335083 FN2299 SNP C -> A AC=1;AN=192;BQB=0.402363;DP=5047;DP4=2054,2625,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.41214e-09;MQSB=0.939441;RPB=0.671406;SGB=-34.8921;VDB=0.451525;EFF=INTRON(MODIFIER||||352|LOC_Os03g28360|protein_coding|CODING|LOC_Os03g28360.1|2|1) FN757-S.SNP.3:16337536 chr03:016337536 0 W/16337536-16337536 FN757-S Single Base Substitution C-T INTRON HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN1402-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1471-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN1471-S SNP T -> C AC=1;AN=188;BQB=0.842165;DP=2828;DP4=754,2004,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.70195e-11;MQSB=0.39252;RPB=0.550262;SGB=33.7061;VDB=0.095671;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN1531-S Single Base Substitution T-C INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN4017-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN4017-S SNP T -> C AC=1;AN=168;BQB=0.882999;DP=2713;DP4=1067,1453,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.68041e-08;MQSB=0.981025;RPB=0.452368;SGB=4.1907;VDB=0.305955;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN4275-S SNP T -> C AC=1;AN=170;BQB=0.89907;DP=2519;DP4=1059,1334,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.56294e-07;MQSB=0.773776;RPB=0.990626;SGB=24.5502;VDB=0.0723699;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN473-S Single Base Substitution T-C INTERGENIC HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN794-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN794-S Single Base Substitution T-C INTERGENIC HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN863-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN863-S Single Base Substitution T-C INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN978-S.SNP.3:16340082 chr03:016340082 0 W/16340082-16340082 FN978-S Single Base Substitution T-C INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2529-S.SNP.3:16340091 chr03:016340091 0 W/16340091-16340091 FN2529-S SNP C -> T AC=1;AN=198;BQB=0.720529;DP=4126;DP4=1791,2142,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82123e-05;MQSB=1;RPB=0.325248;SGB=31.1689;VDB=0.137457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.3:16341713 chr03:016341713 0 W/16341713-16341713 FN3355-S SNP A -> G AC=1;AN=184;BQB=0.424829;DP=2796;DP4=1211,1484,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.51053e-06;MQSB=0.999981;RPB=0.761847;SGB=57.786;VDB=0.881642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.3:16342965 chr03:016342965 0 W/16342965-16342965 FN2392 SNP C -> A AC=1;AN=200;BQB=0.997448;DP=3561;DP4=1187,2080,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.27587e-07;MQSB=0.728411;RPB=0.662815;SGB=45.0543;VDB=0.695687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.3:16346075 chr03:016346075 0 W/16346075-16346075 FN2711-S SNP C -> A AC=2;AN=200;BQB=0.678663;DP=4823;DP4=2184,2307,17,8;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00020734;MQB=2.03664e-06;MQSB=0.277111;RPB=0.434225;SGB=79.9264;VDB=0.938991;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.3:16348732 chr03:016348732 0 W/16348732-16348732 FN995-S Single Base Substitution C-T INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN2138-S.SNP.3:16352083 chr03:016352083 0 W/16352083-16352083 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.095839;DP=2728;DP4=1239,1423,18,18;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.000366569;MQB=0.000120301;MQSB=0.178499;RPB=0.939443;SGB=-88.4675;VDB=0.255223;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.3:16359854 chr03:016359854 0 W/16359854-16359854 FN2080-S SNP C -> A AC=1;AN=168;BQB=0.293692;DP=3369;DP4=1834,1484,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00237459;MQB=3.00527e-07;MQSB=0.792163;RPB=0.388417;SGB=-69.6373;VDB=0.334227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K175N|187|LOC_Os03g28400|protein_coding|CODING|LOC_Os03g28400.1|5|1) FN4325-S.SNP.3:16365730 chr03:016365730 0 W/16365730-16365730 FN4325-S SNP G -> T AC=1;AN=170;BQB=0.981045;DP=2461;DP4=1323,1089,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.43535e-06;MQSB=0.944819;RPB=0.900957;SGB=34.5445;VDB=0.305409;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.3:16366420 chr03:016366420 0 W/16366420-16366420 FN879-S Single Base Substitution G-A INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN-55.SNP.3:16371168 chr03:016371168 0 W/16371168-16371168 FN-55 Single Base Substitution T-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN948-S.SNP.3:16372739 chr03:016372739 0 W/16372739-16372739 FN948-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g28420 3-oxoacyl-synthase, putative, expressed SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3515-S.SNP.3:16382476 chr03:016382476 0 W/16382476-16382476 FN3515-S SNP C -> A AC=1;AN=188;BQB=0.882142;DP=2888;DP4=1453,1346,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17465e-08;MQSB=0.975415;RPB=0.890216;SGB=15.903;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.3:16385394 chr03:016385394 0 W/16385394-16385394 FN2374 SNP A -> T AC=1;AN=192;BQB=0.997522;DP=4628;DP4=2269,2125,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.87519e-13;MQSB=0.973309;RPB=0.828743;SGB=82.5522;VDB=0.26074;EFF=INTRON(MODIFIER||||273|LOC_Os03g28410|protein_coding|CODING|LOC_Os03g28410.1|3|1) FN2374.SNP.3:16385396 chr03:016385396 0 W/16385396-16385396 FN2374 SNP G -> T AC=1;AN=192;BQB=0.763098;DP=4617;DP4=2259,2134,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000216591;MQB=8.91804e-14;MQSB=0.97567;RPB=0.985648;SGB=54.5574;VDB=0.349294;EFF=INTRON(MODIFIER||||273|LOC_Os03g28410|protein_coding|CODING|LOC_Os03g28410.1|3|1) FN2667-S.SNP.3:16391822 chr03:016391822 0 W/16391822-16391822 FN2667-S SNP T -> A AC=1;AN=200;BQB=0.966937;DP=4533;DP4=2495,1876,16,7;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0553717;MQB=0.00220316;MQSB=0.00603494;RPB=0.106142;SGB=72.7161;VDB=0.64994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.3:16394444 chr03:016394444 0 W/16394444-16394444 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.658726;DP=5097;DP4=2629,2207,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.72839e-11;MQSB=0.96515;RPB=0.799506;SGB=54.6902;VDB=0.914786;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.3:16395333 chr03:016395333 0 W/16395333-16395333 FN-131 Single Base Substitution G-T INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-96.SNP.3:16416756 chr03:016416756 0 W/16416756-16416756 FN-96 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g28950 transposon protein, putative, unclassified, expressed SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN-86.SNP.3:16419419 chr03:016419419 0 W/16419419-16419419 FN-86 Single Base Substitution G-A INTERGENIC HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1304-S.SNP.3:16420228 chr03:016420228 0 W/16420228-16420228 FN1304-S Single Base Substitution C-T INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2374.SNP.3:16425099 chr03:016425099 0 W/16425099-16425099 FN2374 SNP A -> T AC=1;AN=192;BQB=0.927989;DP=4803;DP4=1938,2491,8,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208203;MQB=3.1983e-10;MQSB=0.0446271;RPB=0.839123;SGB=16.7409;VDB=0.107599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.3:16430760 chr03:016430760 0 W/16430760-16430760 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.996853;DP=2625;DP4=1384,1113,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000380952;MQB=9.42869e-13;MQSB=0.968876;RPB=0.994321;SGB=85.5263;VDB=0.573433;EFF=INTRON(MODIFIER||||799|LOC_Os03g28960|protein_coding|CODING|LOC_Os03g28960.1|11|1) FN1156-XA21.SNP.3:16446584 chr03:016446584 0 W/16446584-16446584 FN1156-XA21 Single Base Substitution C-T INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3468-S.SNP.3:16446962 chr03:016446962 0 W/16446962-16446962 FN3468-S SNP A -> G AC=1;AN=184;BQB=0.927854;DP=2678;DP4=1348,1243,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.00112024;MQB=0.00248418;MQSB=0.897008;RPB=0.913103;SGB=62.3078;VDB=0.76317;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.3:16447803 chr03:016447803 0 W/16447803-16447803 FN671-S Single Base Substitution C-T INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3598-S.SNP.3:16450563 chr03:016450563 0 W/16450563-16450563 FN3598-S SNP G -> T AC=1;AN=188;BQB=0.945734;DP=3741;DP4=1703,1961,13,15;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=4.47968e-10;MQSB=0.789046;RPB=0.848876;SGB=121.672;VDB=0.773944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E366D|744|LOC_Os03g28980|protein_coding|CODING|LOC_Os03g28980.1|1|1) FN3790-S.SNP.3:16457725 chr03:016457725 0 W/16457725-16457725 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.99105;DP=2438;DP4=1400,965,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0;MQB=0.00380777;MQSB=0.00604511;RPB=0.551719;SGB=67.3108;VDB=0.310738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A63V|424|LOC_Os03g28990|protein_coding|CODING|LOC_Os03g28990.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A63V|540|LOC_Os03g28990|protein_coding|CODING|LOC_Os03g28990.1|1|1) FN1640-S.SNP.3:16476430 chr03:016476430 0 W/16476430-16476430 FN1640-S Single Base Substitution G-T INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2158-S.SNP.3:16476688 chr03:016476688 0 W/16476688-16476688 FN2158-S SNP C -> G AC=1;AN=168;BQB=0.375516;DP=3411;DP4=1851,1514,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=0.185965;MQSB=0.0396652;RPB=0.997346;SGB=-16.2342;VDB=0.622694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1032-S.SNP.3:16550462 chr03:016550462 0 W/16550462-16550462 FN1032-S Single Base Substitution C-A INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN498-S.SNP.3:16553074 chr03:016553074 0 W/16553074-16553074 FN498-S Single Base Substitution C-T INTRON HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. W472-5-1.SNP.3:16553074 chr03:016553074 0 W/16553074-16553074 W472-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2317.SNP.3:16555232 chr03:016555232 0 W/16555232-16555232 FN2317 SNP G -> A AC=2;AN=192;BQB=0.2264;DP=4641;DP4=2236,2050,21,19;HOB=0.0206163;ICB=0.494846;MQ=41;MQ0F=0;MQB=1.6353e-14;MQSB=0.998592;RPB=0.496809;SGB=87.8939;VDB=0.288853;EFF=INTRON(MODIFIER||||291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|1|1),INTRON(MODIFIER||||269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|1|1),INTRON(MODIFIER||||266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|1|1) FN3476-S.SNP.3:16558364 chr03:016558364 0 W/16558364-16558364 FN3476-S SNP A -> G AC=1;AN=184;BQB=0.645743;DP=2324;DP4=988,1243,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98901e-11;MQSB=0.924391;RPB=0.727758;SGB=49.835;VDB=0.726712;EFF=INTRON(MODIFIER||||291|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.1|3|1),INTRON(MODIFIER||||269|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.2|3|1),INTRON(MODIFIER||||266|LOC_Os03g29150|protein_coding|CODING|LOC_Os03g29150.3|3|1) FN3547-S.SNP.3:16583928 chr03:016583928 0 W/16583928-16583928 FN3547-S SNP T -> C AC=1;AN=188;BQB=0.605331;DP=2819;DP4=1254,1512,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97748e-06;MQSB=0.978862;RPB=0.995298;SGB=21.8113;VDB=0.952197;EFF=INTRON(MODIFIER||||323|LOC_Os03g29180|protein_coding|CODING|LOC_Os03g29180.1|2|1) FN3057-S.SNP.3:16595686 chr03:016595686 0 W/16595686-16595686 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.395076;DP=3352;DP4=1247,1980,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.24056e-05;MQSB=0.95011;RPB=0.96687;SGB=28.7043;VDB=0.381414;EFF=UTR_3_PRIME(MODIFIER||42||588|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.1|5|1),UTR_3_PRIME(MODIFIER||42||569|LOC_Os03g29190|protein_coding|CODING|LOC_Os03g29190.2|4|1) FN3869-S.SNP.3:16596336 chr03:016596336 0 W/16596336-16596336 FN3869-S SNP G -> A AC=1;AN=158;BQB=0.610975;DP=2336;DP4=1172,1050,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000647069;MQSB=0.939261;RPB=0.527138;SGB=7.23273;VDB=0.801013;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.3:16598076 chr03:016598076 0 W/16598076-16598076 FN2791-S SNP T -> A AC=1;AN=198;BQB=0.994734;DP=3953;DP4=1903,1814,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.12173e-08;MQSB=0.870731;RPB=0.664474;SGB=61.7198;VDB=0.922012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.3:16622103 chr03:016622103 0 W/16622103-16622103 FN1363-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2678-S.SNP.3:16623311 chr03:016623311 0 W/16623311-16623311 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.877064;DP=5673;DP4=2482,2949,9,13;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0363124;MQB=0.0425967;MQSB=2.97111e-28;RPB=0.866279;SGB=42.5108;VDB=0.0224039;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R480Q|636|LOC_Os03g29224|protein_coding|CODING|LOC_Os03g29224.1|3|1) FN3948-S.SNP.3:16626540 chr03:016626540 0 W/16626540-16626540 FN3948-S SNP A -> G AC=1;AN=168;BQB=0.740415;DP=2019;DP4=600,1310,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000495295;MQB=1.42966e-06;MQSB=0.914908;RPB=0.889022;SGB=4.1907;VDB=0.812082;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.3:16633578 chr03:016633578 0 W/16633578-16633578 FN-311 Single Base Substitution A-G INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2118-S.SNP.3:16633641 chr03:016633641 0 W/16633641-16633641 FN2118-S SNP G -> A AC=2;AN=168;BQB=0.345045;DP=3206;DP4=1468,1649,31,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.67263e-29;MQSB=0.966657;RPB=0.61374;SGB=145.899;VDB=0.949799;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.3:16639114 chr03:016639114 0 W/16639114-16639114 FN-61 Single Base Substitution G-C INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2657-S.SNP.3:16652106 chr03:016652106 0 W/16652106-16652106 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.993734;DP=5016;DP4=2186,2512,20,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.00603e-23;MQSB=0.999647;RPB=0.57975;SGB=46.4088;VDB=0.346387;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.3:16654213 chr03:016654213 0 W/16654213-16654213 FN-179 Single Base Substitution G-A INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2758-S.SNP.3:16666833 chr03:016666833 0 W/16666833-16666833 FN2758-S SNP G -> T AC=1;AN=200;BQB=0.908188;DP=4728;DP4=2326,2172,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54074e-14;MQSB=0.993467;RPB=0.954143;SGB=109.527;VDB=0.429633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.3:16667504 chr03:016667504 0 W/16667504-16667504 FN2640-S SNP A -> G AC=1;AN=200;BQB=0.387368;DP=4768;DP4=2146,2414,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.57814e-08;MQSB=0.925133;RPB=0.71269;SGB=21.6694;VDB=0.79373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.3:16670910 chr03:016670910 0 W/16670910-16670910 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.972646;DP=4251;DP4=2348,1708,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.04363e-07;MQSB=0.980139;RPB=0.912797;SGB=54.144;VDB=0.73286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.3:16676090 chr03:016676090 0 W/16676090-16676090 FN3656-S SNP T -> C AC=2;AN=190;BQB=0.973443;DP=2763;DP4=1296,1355,10,6;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0217155;MQB=4.16567e-06;MQSB=0.265755;RPB=0.52765;SGB=67.3108;VDB=0.81932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.3:16676091 chr03:016676091 0 W/16676091-16676091 FN3656-S SNP G -> T AC=2;AN=190;BQB=0.98404;DP=2775;DP4=1322,1375,9,6;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.021982;MQB=1.35006e-06;MQSB=0.531173;RPB=0.634642;SGB=62.7569;VDB=0.776232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.3:16676488 chr03:016676488 0 W/16676488-16676488 FN1282-S Single Base Substitution G-T INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2541-S.SNP.3:16678996 chr03:016678996 0 W/16678996-16678996 FN2541-S SNP G -> A AC=1;AN=198;BQB=0.573812;DP=4116;DP4=1840,2006,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00218659;MQB=2.99847e-08;MQSB=0.0319308;RPB=0.999995;SGB=34.5346;VDB=0.474067;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A273|911|LOC_Os03g29290|protein_coding|CODING|LOC_Os03g29290.1|3|1) FN814-S.SNP.3:16684988 chr03:016684988 0 W/16684988-16684988 FN814-S Single Base Substitution C-T INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2681-S.SNP.3:16696214 chr03:016696214 0 W/16696214-16696214 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.216518;DP=4830;DP4=2169,2397,20,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55578e-18;MQSB=0.872791;RPB=0.937612;SGB=141.763;VDB=0.666817;EFF=UTR_3_PRIME(MODIFIER||285||751|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.1|13|1),UTR_3_PRIME(MODIFIER||285||477|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.4|13|1),UTR_3_PRIME(MODIFIER||551||680|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.2|14|1),UTR_3_PRIME(MODIFIER||9||463|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.1|9|1),UTR_3_PRIME(MODIFIER||9||449|LOC_Os03g29340|protein_coding|CODING|LOC_Os03g29340.2|9|1) FN3537-S.SNP.3:16698643 chr03:016698643 0 W/16698643-16698643 FN3537-S SNP C -> G AC=1;AN=188;BQB=0.978914;DP=2761;DP4=1438,1255,10,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.13639e-07;MQSB=0.953184;RPB=0.998132;SGB=44.4357;VDB=0.822504;EFF=INTRON(MODIFIER||||751|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.1|10|1),INTRON(MODIFIER||||680|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.2|10|1),INTRON(MODIFIER||||477|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.4|10|1) FN3536-S.SNP.3:16701550 chr03:016701550 0 W/16701550-16701550 FN3536-S SNP C -> A AC=2;AN=188;BQB=0.721828;DP=2825;DP4=1475,1274,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.47966e-11;MQSB=0.882712;RPB=0.955314;SGB=89.8686;VDB=0.71202;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E56*|477|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.4|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R327I|751|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R327I|680|LOC_Os03g29350|protein_coding|CODING|LOC_Os03g29350.2|5|1);LOF=(LOC_Os03g29350|LOC_Os03g29350|3|0.33);NMD=(LOC_Os03g29350|LOC_Os03g29350|3|0.33) FN1422-S.SNP.3:16707129 chr03:016707129 0 W/16707129-16707129 FN1422-S Single Base Substitution G-A INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2534-S.SNP.3:16717935 chr03:016717935 0 W/16717935-16717935 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.687725;DP=4187;DP4=1918,2122,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.06516e-09;MQSB=0.914814;RPB=0.868928;SGB=54.5295;VDB=0.511422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:16721893 chr03:016721893 0 W/16721893-16721893 FN2692-S SNP T -> C AC=1;AN=200;BQB=0.0131034;DP=5149;DP4=2408,2472,29,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00194212;MQB=2.80022e-20;MQSB=0.69214;RPB=0.880678;SGB=-168.013;VDB=0.555685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.3:16723101 chr03:016723101 0 W/16723101-16723101 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.388833;DP=4931;DP4=2375,2233,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.78585e-08;MQSB=0.405245;RPB=0.915917;SGB=62.7569;VDB=0.934415;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.3:16739583 chr03:016739583 0 W/16739583-16739583 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3791-S.SNP.3:16739647 chr03:016739647 0 W/16739647-16739647 FN3791-S SNP G -> A AC=1;AN=190;BQB=0.999402;DP=2475;DP4=1109,1259,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.89313e-07;MQSB=0.69501;RPB=0.627738;SGB=53.6492;VDB=0.0597295;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L92|107|LOC_Os03g29389|protein_coding|CODING|LOC_Os03g29389.1|3|1) FN229-S.SNP.3:16741925 chr03:016741925 0 W/16741925-16741925 FN229-S Single Base Substitution C-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN4108-S.SNP.3:16744731 chr03:016744731 0 W/16744731-16744731 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.981771;DP=2968;DP4=1337,1570,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.5778e-05;MQSB=0.287102;RPB=0.424611;SGB=30.5793;VDB=0.561637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.3:16746909 chr03:016746909 0 W/16746909-16746909 FN1443-S Single Base Substitution A-G INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1443-S.SNP.3:16746910 chr03:016746910 0 W/16746910-16746910 FN1443-S Single Base Substitution A-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2260-S.SNP.3:16755893 chr03:016755893 0 W/16755893-16755893 FN2260-S SNP C -> T AC=2;AN=190;BQB=0.895136;DP=3787;DP4=1367,2168,16,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.7326e-27;MQSB=0.836946;RPB=0.698054;SGB=178.256;VDB=0.702533;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.3:16761902 chr03:016761902 0 W/16761902-16761902 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.301255;DP=2275;DP4=1095,1120,5,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.52939e-05;MQSB=0.9835;RPB=0.995271;SGB=41.7633;VDB=0.8517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.3:16765578 chr03:016765578 0 W/16765578-16765578 FN1042-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN869-S.SNP.3:16767038 chr03:016767038 0 W/16767038-16767038 FN869-S Single Base Substitution G-A INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN869-S.SNP.3:16767039 chr03:016767039 0 W/16767039-16767039 FN869-S Single Base Substitution G-T INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2230-S.SNP.3:16772448 chr03:016772448 0 W/16772448-16772448 FN2230-S SNP A -> T AC=1;AN=190;BQB=0.97454;DP=5854;DP4=2411,3091,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0471472;MQB=0.616496;MQSB=3.87415e-14;RPB=0.994184;SGB=149.281;VDB=0.946235;EFF=INTRON(MODIFIER||||429|LOC_Os03g29430|protein_coding|CODING|LOC_Os03g29430.1|3|1) FN852-S.SNP.3:16773623 chr03:016773623 0 W/16773623-16773623 FN852-S Single Base Substitution G-A INTRON HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2450.SNP.3:16778182 chr03:016778182 0 W/16778182-16778182 FN2450 SNP G -> T AC=1;AN=200;BQB=0.409661;DP=4882;DP4=2298,2315,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.45051e-06;MQSB=0.937191;RPB=0.999997;SGB=35.8441;VDB=0.222697;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.3:16783047 chr03:016783047 0 W/16783047-16783047 FN3668-S SNP G -> C AC=2;AN=190;BQB=0.998121;DP=2588;DP4=1189,1309,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41204e-09;MQSB=0.998682;RPB=0.586091;SGB=71.8647;VDB=0.253637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.3:16784680 chr03:016784680 0 W/16784680-16784680 FN1050-S Single Base Substitution C-T INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2575-S.SNP.3:16785655 chr03:016785655 0 W/16785655-16785655 FN2575-S SNP C -> G AC=2;AN=198;BQB=0.799953;DP=4153;DP4=1685,2066,27,43;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00024079;MQB=1.72011e-37;MQSB=0.507829;RPB=0.999313;SGB=191.725;VDB=0.696978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.3:16789968 chr03:016789968 0 W/16789968-16789968 FN1193-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1278-S.SNP.3:16792857 chr03:016792857 0 W/16792857-16792857 FN1278-S Single Base Substitution C-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1214-S.SNP.3:16798794 chr03:016798794 0 W/16798794-16798794 FN1214-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g29470 transcription initiation factor IID, putative, expressed SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN411-S.SNP.3:16799237 chr03:016799237 0 W/16799237-16799237 FN411-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3976-S.SNP.3:16799341 chr03:016799341 0 W/16799341-16799341 FN3976-S SNP G -> T AC=1;AN=168;BQB=0.863875;DP=2530;DP4=1082,1318,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89663e-09;MQSB=0.948747;RPB=0.995624;SGB=31.908;VDB=0.432721;EFF=UTR_3_PRIME(MODIFIER||377||224|LOC_Os03g29470|protein_coding|CODING|LOC_Os03g29470.1|2|1) FN2496.SNP.3:16800637 chr03:016800637 0 W/16800637-16800637 FN2496 SNP A -> T AC=1;AN=200;BQB=0.975748;DP=4789;DP4=2447,2079,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.34623e-05;MQSB=0.968482;RPB=0.338645;SGB=22.2439;VDB=0.280204;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.3:16801296 chr03:016801296 0 W/16801296-16801296 FN896-S Single Base Substitution G-A INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN4312-S.SNP.3:16810630 chr03:016810630 0 W/16810630-16810630 FN4312-S SNP T -> A AC=1;AN=170;BQB=0.617712;DP=2642;DP4=1279,1228,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.58979e-07;MQSB=0.896791;RPB=0.43651;SGB=61.2001;VDB=0.297974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.3:16815899 chr03:016815899 0 W/16815899-16815899 FN2458 SNP G -> A AC=1;AN=200;BQB=0.677492;DP=4270;DP4=1945,1984,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07726e-12;MQSB=0.864031;RPB=0.710316;SGB=61.9006;VDB=0.298432;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.3:16817056 chr03:016817056 0 W/16817056-16817056 FN239-S Single Base Substitution T-A INTRON HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3897-S.SNP.3:16817393 chr03:016817393 0 W/16817393-16817393 FN3897-S SNP G -> C AC=1;AN=158;BQB=0.958032;DP=1782;DP4=621,1070,4,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.08131e-09;MQSB=0.830755;RPB=0.766665;SGB=68.9144;VDB=0.0730312;EFF=INTRON(MODIFIER||||99|LOC_Os03g29510|protein_coding|CODING|LOC_Os03g29510.1|1|1) FN2650-S.SNP.3:16818251 chr03:016818251 0 W/16818251-16818251 FN2650-S SNP T -> A AC=1;AN=200;BQB=0.813211;DP=4207;DP4=2041,1799,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16134e-10;MQSB=0.815603;RPB=0.0888303;SGB=39.9056;VDB=0.282595;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.3:16819779 chr03:016819779 0 W/16819779-16819779 FN935-S Single Base Substitution T-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2223-S.SNP.3:16826462 chr03:016826462 0 W/16826462-16826462 FN2223-S SNP G -> A AC=2;AN=190;BQB=0.844972;DP=4944;DP4=2032,2511,22,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.86818e-21;MQSB=0.719066;RPB=0.513753;SGB=185.712;VDB=0.175308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S773F|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|5|1) FN2142-S.SNP.3:16828236 chr03:016828236 0 W/16828236-16828236 FN2142-S SNP A -> G AC=1;AN=168;BQB=0.000114428;DP=3672;DP4=1765,1849,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.17921e-07;MQSB=0.954273;RPB=0.8854;SGB=-294.319;VDB=0.430205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y298H|1922|LOC_Os03g29520|protein_coding|CODING|LOC_Os03g29520.1|1|1) FN914-S.SNP.3:16831602 chr03:016831602 0 W/16831602-16831602 FN914-S Single Base Substitution T-C INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-70.SNP.3:16835795 chr03:016835795 0 W/16835795-16835795 FN-70 Single Base Substitution C-A INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN-190.SNP.3:16839616 chr03:016839616 0 W/16839616-16839616 FN-190 Single Base Substitution T-A INTRON HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3376-S.SNP.3:16841980 chr03:016841980 0 W/16841980-16841980 FN3376-S SNP G -> T AC=2;AN=184;BQB=0.850519;DP=3334;DP4=1538,1654,22,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.00802e-26;MQSB=0.969626;RPB=0.973398;SGB=225.092;VDB=0.0745067;EFF=INTRON(MODIFIER||||303|LOC_Os03g29550|protein_coding|CODING|LOC_Os03g29550.1|2|1) FN-180.SNP.3:16844022 chr03:016844022 0 W/16844022-16844022 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN2464.SNP.3:16844598 chr03:016844598 0 W/16844598-16844598 FN2464 SNP T -> C AC=1;AN=200;BQB=0.999661;DP=4973;DP4=2479,2218,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.07235e-09;MQSB=0.556769;RPB=0.972948;SGB=47.4799;VDB=0.660741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.3:16846711 chr03:016846711 0 W/16846711-16846711 FN2345 SNP G -> T AC=1;AN=192;BQB=0.864153;DP=4901;DP4=2372,2254,25,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00081616;MQB=1.09207e-19;MQSB=0.81028;RPB=0.459788;SGB=190.705;VDB=0.407671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D774E|1071|LOC_Os03g29560|protein_coding|CODING|LOC_Os03g29560.1|10|1) FN2660-S.SNP.3:16849124 chr03:016849124 0 W/16849124-16849124 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.941144;DP=4342;DP4=2459,1601,15,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42401e-11;MQSB=0.844868;RPB=0.681531;SGB=77.2904;VDB=0.607884;EFF=INTRON(MODIFIER||||1071|LOC_Os03g29560|protein_coding|CODING|LOC_Os03g29560.1|6|1) FN722-S.SNP.3:16851999 chr03:016851999 0 W/16851999-16851999 FN722-S Single Base Substitution A-T INTRON HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN4063-S.SNP.3:16852288 chr03:016852288 0 W/16852288-16852288 FN4063-S SNP G -> A AC=1;AN=168;BQB=0.411089;DP=3306;DP4=1451,1732,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00635209;MQB=0.517334;MQSB=0.72106;RPB=0.999111;SGB=22.1847;VDB=0.730337;EFF=INTRON(MODIFIER||||1071|LOC_Os03g29560|protein_coding|CODING|LOC_Os03g29560.1|1|1) FN1285-S.SNP.3:16854484 chr03:016854484 0 W/16854484-16854484 FN1285-S Single Base Substitution G-A INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1717-S.SNP.3:16855870 chr03:016855870 0 W/16855870-16855870 FN1717-S SNP C -> G AC=2;AN=188;BQB=0.287849;DP=3141;DP4=1716,1377,16,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07537e-13;MQSB=0.0934454;RPB=0.471216;SGB=59.139;VDB=0.0139307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.3:16858353 chr03:016858353 0 W/16858353-16858353 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.655926;DP=5015;DP4=2705,2022,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.31419e-16;MQSB=0.99745;RPB=0.596081;SGB=87.1368;VDB=0.328175;EFF=INTRON(MODIFIER||||217|LOC_Os03g29570|protein_coding|CODING|LOC_Os03g29570.1|4|1) FN4142-S.SNP.3:16858854 chr03:016858854 0 W/16858854-16858854 FN4142-S SNP C -> A AC=1;AN=170;BQB=0.797568;DP=2316;DP4=1122,1124,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07645e-05;MQSB=0.934295;RPB=0.998001;SGB=47.8722;VDB=0.916585;EFF=INTRON(MODIFIER||||217|LOC_Os03g29570|protein_coding|CODING|LOC_Os03g29570.1|3|1) FN2437.SNP.3:16863356 chr03:016863356 0 W/16863356-16863356 FN2437 SNP T -> C AC=2;AN=200;BQB=0.290318;DP=3958;DP4=1913,1749,27,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.46643e-30;MQSB=0.846177;RPB=0.930052;SGB=243.077;VDB=0.846287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.3:16866023 chr03:016866023 0 W/16866023-16866023 FN-104 Single Base Substitution G-T INTRON HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3476-S.SNP.3:16870306 chr03:016870306 0 W/16870306-16870306 FN3476-S SNP C -> T AC=2;AN=184;BQB=0.373784;DP=2327;DP4=1136,1074,15,11;HOB=0.0215028;ICB=0.494625;MQ=11;MQ0F=0.197679;MQB=0.188178;MQSB=0.965469;RPB=0.995082;SGB=20.4984;VDB=0.236879;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.3:16878134 chr03:016878134 0 W/16878134-16878134 FN-74 Single Base Substitution A-T INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3935-S.SNP.3:16884723 chr03:016884723 0 W/16884723-16884723 FN3935-S SNP T -> A AC=1;AN=158;BQB=0.964627;DP=2319;DP4=1139,1103,11,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.21568e-10;MQSB=0.886323;RPB=0.822042;SGB=77.6532;VDB=0.479184;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.3:16896369 chr03:016896369 0 W/16896369-16896369 FN491-S Single Base Substitution C-T INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN491-S.SNP.3:16896370 chr03:016896370 0 W/16896370-16896370 FN491-S Single Base Substitution C-T INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN1696-S.SNP.3:16899076 chr03:016899076 0 W/16899076-16899076 FN1696-S SNP T -> A AC=1;AN=188;BQB=0.294321;DP=3448;DP4=1952,1455,17,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38374e-06;MQSB=0.611912;RPB=0.81399;SGB=-128.262;VDB=0.190602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.3:16900719 chr03:016900719 0 W/16900719-16900719 FN2332 SNP A -> C AC=1;AN=192;BQB=0.997913;DP=4784;DP4=2407,1873,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00020903;MQB=2.99079e-11;MQSB=1.68469e-11;RPB=0.924103;SGB=51.9931;VDB=0.766579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.3:16903637 chr03:016903637 0 W/16903637-16903637 FN3679-S SNP G -> C AC=2;AN=190;BQB=0.764691;DP=2791;DP4=1203,1414,23,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.23235e-21;MQSB=0.327572;RPB=0.298005;SGB=183.028;VDB=0.151996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.3:16910359 chr03:016910359 0 W/16910359-16910359 FN1326-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3628-S.SNP.3:16921942 chr03:016921942 0 W/16921942-16921942 FN3628-S SNP A -> G AC=1;AN=190;BQB=0.808645;DP=1677;DP4=1101,477,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000140588;MQSB=0.610351;RPB=0.946677;SGB=26.3271;VDB=0.306246;EFF=INTRON(MODIFIER||||114|LOC_Os03g29680|protein_coding|CODING|LOC_Os03g29680.1|1|1) FN4311-S.SNP.3:16933200 chr03:016933200 0 W/16933200-16933200 FN4311-S SNP T -> C AC=1;AN=170;BQB=0.994546;DP=2456;DP4=1257,1149,5,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000407166;MQB=0.000115893;MQSB=0.99581;RPB=0.832375;SGB=25.6601;VDB=0.536793;EFF=INTRON(MODIFIER||||283|LOC_Os03g29710|protein_coding|CODING|LOC_Os03g29710.1|5|1) FN1685-S.SNP.3:16933776 chr03:016933776 0 W/16933776-16933776 FN1685-S SNP A -> G AC=1;AN=188;BQB=0.948591;DP=2682;DP4=1370,1261,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0115585;MQB=2.40993e-05;MQSB=1.62496e-20;RPB=0.662509;SGB=-37.8212;VDB=0.681929;EFF=INTRON(MODIFIER||||283|LOC_Os03g29710|protein_coding|CODING|LOC_Os03g29710.1|4|1) FN1704-S.SNP.3:16934121 chr03:016934121 0 W/16934121-16934121 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.999637;DP=2725;DP4=1330,1336,18,19;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.0110092;MQB=5.35671e-14;MQSB=4.36973e-08;RPB=0.421706;SGB=-3.59057;VDB=0.293405;EFF=INTRON(MODIFIER||||283|LOC_Os03g29710|protein_coding|CODING|LOC_Os03g29710.1|3|1) FN2656-S.SNP.3:16939040 chr03:016939040 0 W/16939040-16939040 FN2656-S SNP G -> A AC=2;AN=200;BQB=0.657955;DP=5050;DP4=2289,2424,31,37;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.45753e-42;MQSB=0.992011;RPB=0.92482;SGB=307.549;VDB=0.872379;EFF=INTRON(MODIFIER||||308|LOC_Os03g29730|protein_coding|CODING|LOC_Os03g29730.1|4|1) FN2656-S.SNP.3:16939041 chr03:016939041 0 W/16939041-16939041 FN2656-S SNP A -> T AC=2;AN=200;BQB=0.998439;DP=5061;DP4=2385,2450,32,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.34112e-41;MQSB=0.999111;RPB=0.899196;SGB=234.949;VDB=0.929704;EFF=INTRON(MODIFIER||||308|LOC_Os03g29730|protein_coding|CODING|LOC_Os03g29730.1|4|1) FN2253-S.SNP.3:16946979 chr03:016946979 0 W/16946979-16946979 FN2253-S SNP T -> C AC=1;AN=190;BQB=0.641553;DP=4813;DP4=2524,1988,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6499e-05;MQSB=0.978777;RPB=0.933785;SGB=39.9877;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.3:16947756 chr03:016947756 0 W/16947756-16947756 FN911-S Single Base Substitution T-G INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN4304-S.SNP.3:16952029 chr03:016952029 0 W/16952029-16952029 FN4304-S SNP T -> C AC=1;AN=170;BQB=0.23455;DP=2518;DP4=1286,1154,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.33728e-09;MQSB=0.970038;RPB=0.864816;SGB=5.77511;VDB=0.297823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W293R|771|LOC_Os03g29750|protein_coding|CODING|LOC_Os03g29750.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W151R|629|LOC_Os03g29750|protein_coding|CODING|LOC_Os03g29750.2|4|1) FN2755-S.SNP.3:16954453 chr03:016954453 0 W/16954453-16954453 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.720286;DP=5117;DP4=2488,2376,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42284e-07;MQSB=0.946671;RPB=0.755389;SGB=43.8747;VDB=0.627345;EFF=UTR_3_PRIME(MODIFIER||89||771|LOC_Os03g29750|protein_coding|CODING|LOC_Os03g29750.1|9|1),UTR_3_PRIME(MODIFIER||89||629|LOC_Os03g29750|protein_coding|CODING|LOC_Os03g29750.2|8|1) FN2355.SNP.3:16961039 chr03:016961039 0 W/16961039-16961039 FN2355 SNP A -> T AC=2;AN=192;BQB=0.986895;DP=5430;DP4=2621,2471,15,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.60616e-17;MQSB=0.974093;RPB=0.273427;SGB=35.5131;VDB=0.309507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.3:16962158 chr03:016962158 0 W/16962158-16962158 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.651053;DP=4904;DP4=2584,1943,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.09589e-16;MQSB=0.959955;RPB=0.993376;SGB=79.9264;VDB=0.901669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.3:16976015 chr03:016976015 0 W/16976015-16976015 FN2580-S SNP T -> C AC=1;AN=198;BQB=0.0795186;DP=4019;DP4=1840,1871,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.79024e-10;MQSB=0.902169;RPB=0.741661;SGB=67.9293;VDB=0.471111;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.3:16976442 chr03:016976442 0 W/16976442-16976442 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN3781-S.SNP.3:16976450 chr03:016976450 0 W/16976450-16976450 FN3781-S SNP T -> G AC=2;AN=190;BQB=0.555058;DP=2352;DP4=1263,1015,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.26016e-10;MQSB=0.97993;RPB=0.510664;SGB=99.1879;VDB=0.182871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.3:16991917 chr03:016991917 0 W/16991917-16991917 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2431.SNP.3:16994342 chr03:016994342 0 W/16994342-16994342 FN2431 SNP C -> A AC=2;AN=200;BQB=0.355524;DP=3567;DP4=1648,1729,14,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.1702e-10;MQSB=5.80856e-05;RPB=0.741686;SGB=58.1418;VDB=0.611263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A5D|259|LOC_Os03g29810|protein_coding|CODING|LOC_Os03g29810.1|1|1) FN409-S.SNP.3:16997100 chr03:016997100 0 W/16997100-16997100 FN409-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g29810 OsClp6 - Putative Clp protease homologue, expressed SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1610-S.SNP.3:16998640 chr03:016998640 0 W/16998640-16998640 FN1610-S Single Base Substitution G-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3650-S.SNP.3:16999892 chr03:016999892 0 W/16999892-16999892 FN3650-S SNP A -> G AC=1;AN=190;BQB=0.993471;DP=2989;DP4=1335,1449,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55867e-08;MQSB=0.955455;RPB=0.6628;SGB=28.7675;VDB=0.826896;EFF=INTRON(MODIFIER||||178|LOC_Os03g29830|protein_coding|CODING|LOC_Os03g29830.1|1|1) FN2237-S.SNP.3:17000270 chr03:017000270 0 W/17000270-17000270 FN2237-S SNP C -> T AC=1;AN=190;BQB=0.12365;DP=4969;DP4=2471,2192,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40244e-06;MQSB=0.995215;RPB=0.582059;SGB=32.5467;VDB=0.295418;EFF=INTRON(MODIFIER||||178|LOC_Os03g29830|protein_coding|CODING|LOC_Os03g29830.1|1|1) FN1740-S.SNP.3:17003714 chr03:017003714 0 W/17003714-17003714 FN1740-S SNP T -> C AC=1;AN=188;BQB=6.10018e-10;DP=3239;DP4=1465,1684,7,31;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000308737;MQB=1.2557e-06;MQSB=0.990395;RPB=0.00948659;SGB=-811.269;VDB=0.333281;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.3:17003714 chr03:017003714 0 W/17003714-17003714 FN692-S Single Base Substitution T-C INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN931-S.SNP.3:17018348 chr03:017018348 0 W/17018348-17018348 FN931-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g29864 retrotransposon protein, putative, unclassified, expressed SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN4109-S.SNP.3:17018920 chr03:017018920 0 W/17018920-17018920 FN4109-S SNP C -> A AC=1;AN=182;BQB=0.969643;DP=3152;DP4=1600,1471,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.000951777;MQB=1.25917e-06;MQSB=0.000147019;RPB=0.522542;SGB=44.1115;VDB=0.0169271;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G465V|1481|LOC_Os03g29864|protein_coding|CODING|LOC_Os03g29864.1|5|1) FN1385-S.SNP.3:17022795 chr03:017022795 0 W/17022795-17022795 FN1385-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1757-S.SNP.3:17022980 chr03:017022980 0 W/17022980-17022980 FN1757-S SNP A -> G AC=1;AN=188;BQB=0.942008;DP=2146;DP4=1354,743,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29024e-07;MQSB=0.988946;RPB=0.92497;SGB=23.5329;VDB=0.699538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.3:17024290 chr03:017024290 0 W/17024290-17024290 FN1613-S Single Base Substitution G-A INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN4113-S.SNP.3:17027365 chr03:017027365 0 W/17027365-17027365 FN4113-S SNP T -> C AC=1;AN=182;BQB=0.874906;DP=3240;DP4=1290,1748,15,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.51783e-14;MQSB=0.946759;RPB=0.0116832;SGB=95.3123;VDB=0.618176;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I367V|962|LOC_Os03g29880|protein_coding|CODING|LOC_Os03g29880.1|3|1) FN1650-S.SNP.3:17032675 chr03:017032675 0 W/17032675-17032675 FN1650-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g29900 transposon protein, putative, unclassified, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN-305.SNP.3:17035047 chr03:017035047 0 W/17035047-17035047 FN-305 Single Base Substitution C-T INTRON HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN517-S.SNP.3:17045407 chr03:017045407 0 W/17045407-17045407 FN517-S Single Base Substitution A-T INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3594-S.SNP.3:17054984 chr03:017054984 0 W/17054984-17054984 FN3594-S SNP A -> G AC=1;AN=188;BQB=0.618007;DP=3100;DP4=1401,1553,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000322581;MQB=1.22749e-10;MQSB=0.909089;RPB=0.552639;SGB=71.4172;VDB=0.728126;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.3:17055010 chr03:017055010 0 W/17055010-17055010 FN4128-S SNP A -> C AC=1;AN=182;BQB=0.959274;DP=2924;DP4=1362,1456,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.32067e-05;MQSB=0.999167;RPB=0.999431;SGB=21.5845;VDB=0.968009;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.3:17061045 chr03:017061045 0 W/17061045-17061045 FN1763-S SNP G -> A AC=2;AN=188;BQB=0.00128385;DP=3429;DP4=1366,1975,14,35;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.20066e-12;MQSB=0.992098;RPB=0.170832;SGB=-693.065;VDB=0.384686;EFF=INTRON(MODIFIER||||1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|1|1) FN3537-S.SNP.3:17061545 chr03:017061545 0 W/17061545-17061545 FN3537-S SNP A -> G AC=2;AN=188;BQB=0.997848;DP=2791;DP4=1263,1451,8,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.56214e-11;MQSB=0.998173;RPB=0.700337;SGB=80.782;VDB=0.893246;EFF=INTRON(MODIFIER||||1211|LOC_Os03g29940|protein_coding|CODING|LOC_Os03g29940.1|1|1) FN453-S.SNP.3:17062961 chr03:017062961 0 W/17062961-17062961 FN453-S Single Base Substitution C-T INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3050-S.SNP.3:17068073 chr03:017068073 0 W/17068073-17068073 FN3050-S SNP C -> T AC=2;AN=184;BQB=0.993448;DP=3464;DP4=1525,1827,8,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.9467e-13;MQSB=0.99919;RPB=0.9963;SGB=98.4821;VDB=0.476542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R55C|577|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.1|1|1),START_GAINED(LOW||||451|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.2|1|1),UTR_5_PRIME(MODIFIER||422||451|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.2|1|1) FN4094-S.SNP.3:17070707 chr03:017070707 0 W/17070707-17070707 FN4094-S SNP A -> C AC=2;AN=182;BQB=0.90388;DP=3118;DP4=1491,1570,7,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.89156e-13;MQSB=0.862014;RPB=0.61106;SGB=89.2199;VDB=0.0208016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q322P|577|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q196P|451|LOC_Os03g29950|protein_coding|CODING|LOC_Os03g29950.2|7|1) FN3286-S.SNP.3:17072771 chr03:017072771 0 W/17072771-17072771 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.937375;DP=3305;DP4=1570,1610,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.31602e-08;MQSB=0.968214;RPB=0.653354;SGB=15.7097;VDB=0.345999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.3:17074992 chr03:017074992 0 W/17074992-17074992 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.605932;DP=4831;DP4=2568,2045,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93588e-12;MQSB=0.762966;RPB=0.48121;SGB=91.1059;VDB=0.119596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.3:17075963 chr03:017075963 0 W/17075963-17075963 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.999816;DP=2601;DP4=1250,1189,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.66608e-10;MQSB=0.976176;RPB=0.471542;SGB=6.19449;VDB=0.650456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.3:17076155 chr03:017076155 0 W/17076155-17076155 FN2211-S SNP A -> T AC=1;AN=190;BQB=0.734678;DP=5109;DP4=2556,2378,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82222e-09;MQSB=9.27977e-08;RPB=0.386979;SGB=50.3161;VDB=0.435056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.3:17085702 chr03:017085702 0 W/17085702-17085702 FN1264-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1472-S.SNP.3:17087020 chr03:017087020 0 W/17087020-17087020 FN1472-S Single Base Substitution T-C INTRON Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN4247-S.SNP.3:17087787 chr03:017087787 0 W/17087787-17087787 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.991183;DP=2278;DP4=989,1213,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84348e-07;MQSB=0.998113;RPB=0.934545;SGB=52.3148;VDB=0.789643;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.3:17090610 chr03:017090610 0 W/17090610-17090610 FN-195 Single Base Substitution C-A INTERGENIC HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1118-S.SNP.3:17091817 chr03:017091817 0 W/17091817-17091817 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2558-S.SNP.3:17095149 chr03:017095149 0 W/17095149-17095149 FN2558-S SNP G -> A AC=2;AN=198;BQB=0.310196;DP=4092;DP4=1996,1840,19,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.39769e-24;MQSB=0.898726;RPB=0.950759;SGB=178.212;VDB=0.908296;EFF=UTR_3_PRIME(MODIFIER||66||374|LOC_Os03g29980|protein_coding|CODING|LOC_Os03g29980.2|7|1) FN2698-S.SNP.3:17095852 chr03:017095852 0 W/17095852-17095852 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.148228;DP=5202;DP4=2474,2394,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24857e-14;MQSB=0.912967;RPB=0.475953;SGB=-5.84819;VDB=0.436703;EFF=UTR_3_PRIME(MODIFIER||769||374|LOC_Os03g29980|protein_coding|CODING|LOC_Os03g29980.2|7|1) FN1085-S.SNP.3:17103186 chr03:017103186 0 W/17103186-17103186 FN1085-S Single Base Substitution G-T INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2268-S.SNP.3:17119456 chr03:017119456 0 W/17119456-17119456 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.899585;DP=4471;DP4=1983,2201,4,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000223664;MQB=5.44619e-11;MQSB=0.863653;RPB=0.8167;SGB=64.5316;VDB=0.49346;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A96|113|LOC_Os03g30010|protein_coding|CODING|LOC_Os03g30010.1|3|1) FN2673-S.SNP.3:17122078 chr03:017122078 0 W/17122078-17122078 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.687063;DP=5093;DP4=2504,2303,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4718e-08;MQSB=0.53343;RPB=0.863912;SGB=11.0951;VDB=0.319247;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.3:17129522 chr03:017129522 0 W/17129522-17129522 FN893-S Single Base Substitution T-G INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2280-S.SNP.3:17132460 chr03:017132460 0 W/17132460-17132460 FN2280-S SNP A -> T AC=1;AN=190;BQB=0.974262;DP=4867;DP4=1989,2413,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29866e-06;MQSB=0.799262;RPB=0.981358;SGB=5.66499;VDB=0.30914;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.3:17138315 chr03:017138315 0 W/17138315-17138315 FN443-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3510-S.SNP.3:17140429 chr03:017140429 0 W/17140429-17140429 FN3510-S SNP T -> C AC=1;AN=188;BQB=0.999515;DP=3163;DP4=1556,1507,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77042e-08;MQSB=0.890483;RPB=0.834844;SGB=43.0708;VDB=0.711884;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.3:17146514 chr03:017146514 0 W/17146514-17146514 FN1076-S Single Base Substitution C-G INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN1323-S.SNP.3:17158642 chr03:017158642 0 W/17158642-17158642 FN1323-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1554-S.SNP.3:17158642 chr03:017158642 0 W/17158642-17158642 FN1554-S Single Base Substitution G-T INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1722-S.SNP.3:17158642 chr03:017158642 0 W/17158642-17158642 FN1722-S SNP G -> T AC=1;AN=188;BQB=0.959196;DP=3858;DP4=1913,1897,26,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.01366e-20;MQSB=0.953568;RPB=0.943864;SGB=84.5719;VDB=0.0545745;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.3:17164073 chr03:017164073 0 W/17164073-17164073 FN501-S Single Base Substitution A-G INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN461-S.SNP.3:17164124 chr03:017164124 0 W/17164124-17164124 FN461-S Single Base Substitution C-G INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN1344-S.SNP.3:17169068 chr03:017169068 0 W/17169068-17169068 FN1344-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2378.SNP.3:17176129 chr03:017176129 0 W/17176129-17176129 FN2378 SNP C -> T AC=1;AN=192;BQB=0.0241143;DP=4391;DP4=1904,2090,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000227739;MQB=1.73606e-07;MQSB=0.251189;RPB=0.995687;SGB=72.0322;VDB=0.295048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.3:17178185 chr03:017178185 0 W/17178185-17178185 FN3506-S SNP C -> G AC=2;AN=188;BQB=0.758941;DP=3020;DP4=1535,1386,22,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28892e-16;MQSB=0.942525;RPB=0.372389;SGB=61.6823;VDB=0.76142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.3:17178680 chr03:017178680 0 W/17178680-17178680 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.73935;DP=4502;DP4=2164,2072,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8468e-09;MQSB=0.926957;RPB=0.151709;SGB=42.5108;VDB=0.850791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.3:17178887 chr03:017178887 0 W/17178887-17178887 FN2430 SNP T -> A AC=1;AN=200;BQB=0.990981;DP=4007;DP4=1873,1686,17,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19825e-12;MQSB=0.0120047;RPB=0.340593;SGB=72.7161;VDB=0.782042;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.3:17179692 chr03:017179692 0 W/17179692-17179692 FN4177-S SNP T -> C AC=1;AN=170;BQB=0.869178;DP=2889;DP4=1501,1279,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.05161e-13;MQSB=0.996633;RPB=0.853304;SGB=39.4251;VDB=0.839779;EFF=SPLICE_SITE_REGION(LOW||||621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G180|621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|3|1) FN2459.SNP.3:17179964 chr03:017179964 0 W/17179964-17179964 FN2459 SNP C -> T AC=1;AN=200;BQB=0.0548575;DP=4302;DP4=2002,1971,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023245;MQB=9.48342e-09;MQSB=0.956586;RPB=0.0582726;SGB=45.1159;VDB=0.135211;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A234V|621|LOC_Os03g30100|protein_coding|CODING|LOC_Os03g30100.1|4|1) FN2771-S.SNP.3:17183689 chr03:017183689 0 W/17183689-17183689 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.91522;DP=4094;DP4=1892,1943,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00048852;MQB=0.00144144;MQSB=0.000140239;RPB=0.958788;SGB=16.3688;VDB=0.43896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1091S|1727|LOC_Os03g30110|protein_coding|CODING|LOC_Os03g30110.1|7|1) FN1008-S.SNP.3:17184770 chr03:017184770 0 W/17184770-17184770 FN1008-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g30110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN4325-S.SNP.3:17192676 chr03:017192676 0 W/17192676-17192676 FN4325-S SNP A -> G AC=1;AN=170;BQB=0.973713;DP=2422;DP4=985,1374,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.22023e-09;MQSB=0.99042;RPB=0.948328;SGB=65.6427;VDB=0.757288;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.3:17196729 chr03:017196729 0 W/17196729-17196729 FN3820-S SNP A -> T AC=1;AN=190;BQB=0.962488;DP=2286;DP4=1049,1161,1,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44694e-05;MQSB=0.996064;RPB=0.925802;SGB=30.8803;VDB=0.732531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1657-S.SNP.3:17197108 chr03:017197108 0 W/17197108-17197108 FN1657-S Single Base Substitution A-G INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN418-S.SNP.3:17199622 chr03:017199622 0 W/17199622-17199622 FN418-S Single Base Substitution G-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3438-S.SNP.3:17199909 chr03:017199909 0 W/17199909-17199909 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.999679;DP=2539;DP4=1171,1224,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.37532e-10;MQSB=0.644195;RPB=0.988771;SGB=71.3514;VDB=0.973634;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.3:17202056 chr03:017202056 0 W/17202056-17202056 FN4158-S SNP G -> C AC=2;AN=170;BQB=0.909065;DP=2387;DP4=1023,1193,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.3522e-12;MQSB=0.63623;RPB=0.960183;SGB=79.6325;VDB=0.413595;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.3:17207189 chr03:017207189 0 W/17207189-17207189 FN980-S Single Base Substitution C-T INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.3:17212414 chr03:017212414 0 W/17212414-17212414 FN980-S Single Base Substitution A-G INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN4271-S.SNP.3:17215007 chr03:017215007 0 W/17215007-17215007 FN4271-S SNP T -> C AC=1;AN=170;BQB=0.970988;DP=2621;DP4=1234,1198,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000381534;MQB=3.25901e-07;MQSB=0.669212;RPB=0.936173;SGB=0.00451649;VDB=0.432226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I225M|277|LOC_Os03g30150|protein_coding|CODING|LOC_Os03g30150.1|1|1) FN2124-S.SNP.3:17223868 chr03:017223868 0 W/17223868-17223868 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.922163;DP=3021;DP4=1540,1429,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.69357e-10;MQSB=0.999855;RPB=0.658044;SGB=-14.5109;VDB=0.28773;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F322|516|LOC_Os03g30180|protein_coding|CODING|LOC_Os03g30180.1|2|1) FN4182-S.SNP.3:17223924 chr03:017223924 0 W/17223924-17223924 FN4182-S SNP C -> T AC=2;AN=170;BQB=0.983653;DP=2505;DP4=1273,1137,17,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.28857e-14;MQSB=0.734792;RPB=0.864396;SGB=101.184;VDB=0.401172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P341L|516|LOC_Os03g30180|protein_coding|CODING|LOC_Os03g30180.1|2|1) FN2332.SNP.3:17224578 chr03:017224578 0 W/17224578-17224578 FN2332 SNP C -> G AC=1;AN=192;BQB=0.863463;DP=4575;DP4=2176,2118,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.99922e-14;MQSB=0.807959;RPB=0.774875;SGB=108.547;VDB=0.050358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T421S|516|LOC_Os03g30180|protein_coding|CODING|LOC_Os03g30180.1|3|1) FN3546-S.SNP.3:17224578 chr03:017224578 0 W/17224578-17224578 FN3546-S SNP C -> G AC=2;AN=188;BQB=0.995005;DP=3203;DP4=1580,1555,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.07594e-12;MQSB=0.991354;RPB=0.932493;SGB=89.8686;VDB=0.200049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T421S|516|LOC_Os03g30180|protein_coding|CODING|LOC_Os03g30180.1|3|1) FN1634-S.SNP.3:17224898 chr03:017224898 0 W/17224898-17224898 FN1634-S Single Base Substitution G-C INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3770-S.SNP.3:17228109 chr03:017228109 0 W/17228109-17228109 FN3770-S SNP T -> G AC=1;AN=190;BQB=0.92379;DP=3394;DP4=1589,1680,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000589275;MQB=1.77563e-08;MQSB=0.892471;RPB=0.975053;SGB=50.3161;VDB=0.503602;EFF=INTRON(MODIFIER||||535|LOC_Os03g30190|protein_coding|CODING|LOC_Os03g30190.1|1|1) FN3535-S.SNP.3:17229388 chr03:017229388 0 W/17229388-17229388 FN3535-S SNP T -> A AC=1;AN=188;BQB=0.925534;DP=2685;DP4=1282,1315,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75998e-06;MQSB=0.980583;RPB=0.910816;SGB=21.8113;VDB=0.969724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.3:17229393 chr03:017229393 0 W/17229393-17229393 FN3535-S SNP C -> A AC=1;AN=188;BQB=0.989916;DP=2694;DP4=1288,1357,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02394e-05;MQSB=0.98611;RPB=0.722557;SGB=30.8063;VDB=0.900208;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.3:17229709 chr03:017229709 0 W/17229709-17229709 FN1475-S Single Base Substitution C-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN978-S.SNP.3:17233482 chr03:017233482 0 W/17233482-17233482 FN978-S Single Base Substitution T-C INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN879-S.SNP.3:17234845 chr03:017234845 0 W/17234845-17234845 FN879-S Single Base Substitution A-T INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3572-S.SNP.3:17238939 chr03:017238939 0 W/17238939-17238939 FN3572-S SNP G -> T AC=2;AN=188;BQB=0.975961;DP=2778;DP4=1581,1091,19,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.70131e-20;MQSB=0.980199;RPB=0.861099;SGB=158.018;VDB=0.745316;EFF=INTRON(MODIFIER||||208|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.1|1|1),INTRON(MODIFIER||||206|LOC_Os03g30200|protein_coding|CODING|LOC_Os03g30200.2|1|1) FN1281-S.SNP.3:17243074 chr03:017243074 0 W/17243074-17243074 FN1281-S Single Base Substitution C-G INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2788-S.SNP.3:17243194 chr03:017243194 0 W/17243194-17243194 FN2788-S SNP C -> G AC=1;AN=198;BQB=0.928238;DP=7989;DP4=4113,3386,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0579547;MQB=0.66609;MQSB=0.000522349;RPB=0.966671;SGB=72.5051;VDB=0.40924;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.3:17243360 chr03:017243360 0 W/17243360-17243360 FN713-S Single Base Substitution C-T INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3455-S.SNP.3:17249950 chr03:017249950 0 W/17249950-17249950 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.983589;DP=2644;DP4=1291,1235,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.06513e-07;MQSB=0.921526;RPB=0.985593;SGB=44.2207;VDB=0.836722;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.3:17250900 chr03:017250900 0 W/17250900-17250900 FN-325 Single Base Substitution G-A INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN3472-S.SNP.3:17257358 chr03:017257358 0 W/17257358-17257358 FN3472-S SNP C -> T AC=1;AN=184;BQB=0.996839;DP=3003;DP4=1759,1144,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.19151e-08;MQSB=0.973721;RPB=0.408916;SGB=42.7914;VDB=0.909085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.3:17258232 chr03:017258232 0 W/17258232-17258232 FN3887-S SNP C -> T AC=1;AN=158;BQB=0.877984;DP=2277;DP4=1302,855,16,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.81375e-11;MQSB=0.771575;RPB=0.543825;SGB=57.6596;VDB=0.852796;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.3:17259369 chr03:017259369 0 W/17259369-17259369 FN750-S Single Base Substitution G-T INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN3815-S.SNP.3:17261313 chr03:017261313 0 W/17261313-17261313 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.774579;DP=3621;DP4=1701,1797,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.99483e-10;MQSB=0.996366;RPB=0.80119;SGB=57.4238;VDB=0.174328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G240A|468|LOC_Os03g30250|protein_coding|CODING|LOC_Os03g30250.1|2|1) FN1015-S.SNP.3:17271090 chr03:017271090 0 W/17271090-17271090 FN1015-S Single Base Substitution T-C INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3535-S.SNP.3:17273894 chr03:017273894 0 W/17273894-17273894 FN3535-S SNP T -> G AC=1;AN=188;BQB=0.901426;DP=2817;DP4=1536,1169,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=5.70415e-06;MQSB=0.0202443;RPB=0.494013;SGB=28.8977;VDB=0.690053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.3:17280435 chr03:017280435 0 W/17280435-17280435 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.931831;DP=3640;DP4=2031,1426,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47051e-07;MQSB=0.322567;RPB=0.998441;SGB=49.5489;VDB=0.507257;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.3:17281372 chr03:017281372 0 W/17281372-17281372 FN3712-S SNP A -> G AC=1;AN=190;BQB=0.990534;DP=2599;DP4=1150,1247,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27895e-06;MQSB=0.99879;RPB=0.89694;SGB=32.5467;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.3:17283211 chr03:017283211 0 W/17283211-17283211 FN3712-S SNP C -> T AC=1;AN=190;BQB=0.984106;DP=2353;DP4=939,1328,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000293741;MQSB=1.69472e-12;RPB=0.90351;SGB=30.8803;VDB=0.471462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN1751-S SNP G -> A AC=2;AN=188;BQB=0.499703;DP=3498;DP4=2069,1382,18,16;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00343053;MQB=7.43388e-08;MQSB=5.16766e-28;RPB=0.999448;SGB=-43.7584;VDB=0.153519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN3610-S SNP G -> A AC=2;AN=190;BQB=0.990673;DP=2514;DP4=1440,940,13,8;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0163087;MQB=1.92754e-06;MQSB=2.17773e-08;RPB=0.533143;SGB=90.0802;VDB=0.0731755;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN4184-S SNP G -> A AC=2;AN=170;BQB=0.86266;DP=2343;DP4=1301,911,15,9;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.0166453;MQB=2.05832e-06;MQSB=1.83605e-06;RPB=0.388145;SGB=72.7472;VDB=0.779432;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN480-S Single Base Substitution G-A INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN540-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN540-S Single Base Substitution G-A INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN739-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN739-S Single Base Substitution G-A INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.3:17283786 chr03:017283786 0 W/17283786-17283786 FN988-S Single Base Substitution G-A INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-249.SNP.3:17284824 chr03:017284824 0 W/17284824-17284824 FN-249 Single Base Substitution C-A INTERGENIC HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN959-S.SNP.3:17296025 chr03:017296025 0 W/17296025-17296025 FN959-S Single Base Substitution G-T INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1636-S.SNP.3:17296132 chr03:017296132 0 W/17296132-17296132 FN1636-S Single Base Substitution G-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN3301-S.SNP.3:17301263 chr03:017301263 0 W/17301263-17301263 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.699366;DP=3476;DP4=1758,1621,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00439e-11;MQSB=0.975407;RPB=0.462715;SGB=11.3677;VDB=0.87771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.3:17302775 chr03:017302775 0 W/17302775-17302775 FN2472 SNP A -> G AC=1;AN=200;BQB=0.903523;DP=2649;DP4=1416,735,22,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.03052e-10;MQSB=8.49079e-15;RPB=0.147825;SGB=-75.0485;VDB=0.0120348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.3:17303087 chr03:017303087 0 W/17303087-17303087 FN2196-S SNP A -> T AC=1;AN=190;BQB=0.593038;DP=4153;DP4=2126,1746,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70931e-08;MQSB=0.43166;RPB=0.332773;SGB=5.66499;VDB=0.108106;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.3:17307669 chr03:017307669 0 W/17307669-17307669 FN3508-S SNP G -> C AC=2;AN=188;BQB=0.934957;DP=2531;DP4=1433,1022,11,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.11911e-11;MQSB=0.972024;RPB=0.987252;SGB=76.2387;VDB=0.750627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.3:17308543 chr03:017308543 0 W/17308543-17308543 FN2701-S SNP G -> C AC=1;AN=200;BQB=0.626509;DP=4706;DP4=2103,2342,11,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.56859e-09;MQSB=5.45894e-05;RPB=0.999892;SGB=68.0801;VDB=0.671454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.3:17311976 chr03:017311976 0 W/17311976-17311976 FN2437 SNP G -> C AC=2;AN=200;BQB=0.730663;DP=4745;DP4=2303,2149,23,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14971e-27;MQSB=0.332433;RPB=0.75626;SGB=238.471;VDB=0.0783472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L841F|999|LOC_Os03g30350|protein_coding|CODING|LOC_Os03g30350.1|5|1) FN1674-S.SNP.3:17319480 chr03:017319480 0 W/17319480-17319480 FN1674-S SNP G -> A AC=1;AN=188;BQB=0.143928;DP=2970;DP4=1360,1582,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000673401;MQB=9.03801e-05;MQSB=6.83834e-43;RPB=0.571972;SGB=-13.9132;VDB=0.939832;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S174N|941|LOC_Os03g30370|protein_coding|CODING|LOC_Os03g30370.1|1|1) FN3459-S.SNP.3:17322003 chr03:017322003 0 W/17322003-17322003 FN3459-S SNP A -> G AC=1;AN=184;BQB=0.930367;DP=2619;DP4=1337,1182,1,10;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0538373;MQB=0.535346;MQSB=6.49721e-08;RPB=0.324198;SGB=44.2207;VDB=0.11434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K885R|941|LOC_Os03g30370|protein_coding|CODING|LOC_Os03g30370.1|5|1) FN2192-S.SNP.3:17323063 chr03:017323063 0 W/17323063-17323063 FN2192-S SNP C -> A AC=1;AN=190;BQB=0.962523;DP=6754;DP4=2672,3566,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0387918;MQB=0.875251;MQSB=0.00924631;RPB=0.632466;SGB=10.3266;VDB=0.750798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.3:17323244 chr03:017323244 0 W/17323244-17323244 FN2330 SNP C -> A AC=1;AN=192;BQB=0.796986;DP=5963;DP4=2013,3522,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0737884;MQB=0.898761;MQSB=0;RPB=0.0352865;SGB=-39.6843;VDB=0.0679019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.3:17324708 chr03:017324708 0 W/17324708-17324708 FN2472 SNP A -> C AC=1;AN=200;BQB=0.998302;DP=4276;DP4=2087,1913,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00187091;MQB=5.55882e-13;MQSB=0.15079;RPB=0.448337;SGB=87.1368;VDB=0.355171;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.3:17334041 chr03:017334041 0 W/17334041-17334041 FN-263 Single Base Substitution G-C INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN577-S.SNP.3:17334041 chr03:017334041 0 W/17334041-17334041 FN577-S Single Base Substitution G-C INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN2122-S.SNP.3:17337623 chr03:017337623 0 W/17337623-17337623 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.295431;DP=3916;DP4=1855,2034,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.43497e-09;MQSB=0.43736;RPB=0.970404;SGB=-63.3606;VDB=0.685736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.3:17342795 chr03:017342795 0 W/17342795-17342795 FN2217-S SNP C -> T AC=2;AN=190;BQB=0.620731;DP=5355;DP4=2347,2450,23,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000186741;MQB=2.36476e-23;MQSB=0.519443;RPB=0.844785;SGB=-100.811;VDB=0.894323;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.3:17348376 chr03:017348376 0 W/17348376-17348376 FN-85 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g30430 nitrilase-associated protein, putative, expressed SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2562-S.SNP.3:17348492 chr03:017348492 0 W/17348492-17348492 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.446246;DP=4034;DP4=1815,2044,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.98525e-08;MQSB=0.915303;RPB=0.747507;SGB=32.9588;VDB=0.194617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A41V|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A41V|116|LOC_Os03g30430|protein_coding|CODING|LOC_Os03g30430.2|2|1) FN560-S.SNP.3:17350734 chr03:017350734 0 W/17350734-17350734 FN560-S Single Base Substitution G-A INTERGENIC HET SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1142-S.SNP.3:17355056 chr03:017355056 0 W/17355056-17355056 FN1142-S Single Base Substitution A-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2705-S.SNP.3:17361752 chr03:017361752 0 W/17361752-17361752 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.798475;DP=4615;DP4=2241,2136,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.42075e-06;MQSB=0.99999;RPB=0.913168;SGB=35.8441;VDB=0.716164;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.3:17362390 chr03:017362390 0 W/17362390-17362390 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.999338;DP=2585;DP4=1175,1345,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.13878e-07;MQSB=0.794766;RPB=0.996552;SGB=43.4296;VDB=0.731141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.3:17363038 chr03:017363038 0 W/17363038-17363038 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.085402;DP=3984;DP4=2235,1469,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.40256e-08;MQSB=0.976888;RPB=0.479395;SGB=37.1297;VDB=0.196971;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.3:17363406 chr03:017363406 0 W/17363406-17363406 FN594-S Single Base Substitution C-A INTERGENIC HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3580-S.SNP.3:17364962 chr03:017364962 0 W/17364962-17364962 FN3580-S SNP C -> T AC=2;AN=188;BQB=0.905859;DP=2714;DP4=1479,1155,16,15;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.0110538;MQB=3.64305e-11;MQSB=0.533344;RPB=0.997887;SGB=135.302;VDB=0.498798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G1289R|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|6|1) FN3599-S.SNP.3:17366444 chr03:017366444 0 W/17366444-17366444 FN3599-S SNP C -> T AC=2;AN=188;BQB=0.992076;DP=2821;DP4=1343,1381,26,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.66091e-24;MQSB=0.997445;RPB=0.936202;SGB=193.403;VDB=0.318676;EFF=INTRON(MODIFIER||||1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|5|1) FN1011-S.SNP.3:17366868 chr03:017366868 0 W/17366868-17366868 FN1011-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g30450 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN-299.SNP.3:17368123 chr03:017368123 0 W/17368123-17368123 FN-299 Single Base Substitution C-T INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2201-S.SNP.3:17368404 chr03:017368404 0 W/17368404-17368404 FN2201-S SNP G -> T AC=1;AN=190;BQB=0.897173;DP=5090;DP4=2325,2272,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.34169e-11;MQSB=0.0741601;RPB=0.14343;SGB=-11.0065;VDB=0.144922;EFF=INTRON(MODIFIER||||1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|3|1) FN889-S.SNP.3:17369719 chr03:017369719 0 W/17369719-17369719 FN889-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN75-S-43.SNP.3:17370428 chr03:017370428 0 W/17370428-17370428 FN75-S-43 SNP C -> T AC=1;AN=190;BQB=0.328449;DP=4793;DP4=2173,2287,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53726e-14;MQSB=0.848188;RPB=0.873926;SGB=21.2038;VDB=0.919307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R185Q|1543|LOC_Os03g30450|protein_coding|CODING|LOC_Os03g30450.1|3|1) FN1455-S.SNP.3:17370683 chr03:017370683 0 W/17370683-17370683 FN1455-S Single Base Substitution C-T INTRON HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2532-S.SNP.3:17373061 chr03:017373061 0 W/17373061-17373061 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.98978;DP=4198;DP4=2077,1812,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.15843e-11;MQSB=0.995533;RPB=0.659426;SGB=42.3199;VDB=0.702193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.3:17376274 chr03:017376274 0 W/17376274-17376274 FN3514-S SNP G -> T AC=2;AN=188;BQB=0.610917;DP=3158;DP4=1337,1603,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.15036e-22;MQSB=0.959769;RPB=0.513816;SGB=171.648;VDB=0.405481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:17376767 chr03:017376767 0 W/17376767-17376767 FN2659-S SNP A -> G AC=1;AN=200;BQB=0.712073;DP=5045;DP4=2459,2328,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33845e-08;MQSB=0.981738;RPB=0.545353;SGB=43.8747;VDB=0.94058;EFF=UTR_3_PRIME(MODIFIER||75||702|LOC_Os03g30460|protein_coding|CODING|LOC_Os03g30460.1|19|1) FN917-S.SNP.3:17384499 chr03:017384499 0 W/17384499-17384499 FN917-S Single Base Substitution T-G INTRON HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3453-S.SNP.3:17389084 chr03:017389084 0 W/17389084-17389084 FN3453-S SNP C -> A AC=2;AN=184;BQB=0.912568;DP=2839;DP4=1459,1251,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.80715e-12;MQSB=0.998105;RPB=0.960382;SGB=70.9657;VDB=0.932896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.3:17391737 chr03:017391737 0 W/17391737-17391737 FN3316-S SNP C -> T AC=1;AN=184;BQB=0.0857567;DP=3431;DP4=1438,1906,3,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.92296e-06;MQSB=0.948561;RPB=0.664108;SGB=66.8296;VDB=0.954885;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V294|326|LOC_Os03g30470|protein_coding|CODING|LOC_Os03g30470.1|1|1) FN1281-S.SNP.3:17392771 chr03:017392771 0 W/17392771-17392771 FN1281-S Single Base Substitution C-G INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1478-S.SNP.3:17397589 chr03:017397589 0 W/17397589-17397589 FN1478-S Single Base Substitution G-A INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1136-19-S.SNP.3:17404739 chr03:017404739 0 W/17404739-17404739 FN1136-19-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1268-S.SNP.3:17410500 chr03:017410500 0 W/17410500-17410500 FN1268-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN419-S.SNP.3:17415379 chr03:017415379 0 W/17415379-17415379 FN419-S Single Base Substitution A-G INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2619-S.SNP.3:17416003 chr03:017416003 0 W/17416003-17416003 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.994711;DP=4051;DP4=1949,1851,15,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.34219e-19;MQSB=0.992715;RPB=0.0862066;SGB=-3.12362;VDB=0.741985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.3:17420029 chr03:017420029 0 W/17420029-17420029 FN1757-S SNP G -> C AC=1;AN=188;BQB=0.779665;DP=4289;DP4=2306,1936,20,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.47936e-16;MQSB=0.899171;RPB=0.41087;SGB=28.6876;VDB=0.695305;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.3:17438769 chr03:017438769 0 W/17438769-17438769 FN-281 Single Base Substitution C-T UTR_3_PRIME HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1750-S.SNP.3:17440590 chr03:017440590 0 W/17440590-17440590 FN1750-S SNP T -> A AC=1;AN=188;BQB=0.550828;DP=3927;DP4=1917,1982,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.45472e-07;MQSB=0.601853;RPB=0.736035;SGB=26.0762;VDB=0.896041;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.3:17444749 chr03:017444749 0 W/17444749-17444749 FN418-S Single Base Substitution G-A INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-402.SNP.3:17444796 chr03:017444796 0 W/17444796-17444796 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1448-S.SNP.3:17447518 chr03:017447518 0 W/17447518-17447518 FN1448-S Single Base Substitution G-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3356-S.SNP.3:17463245 chr03:017463245 0 W/17463245-17463245 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.792535;DP=2944;DP4=1508,1333,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000158011;MQSB=0.97218;RPB=0.42688;SGB=25.1826;VDB=0.303287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3658-S.SNP.3:17464244 chr03:017464244 0 W/17464244-17464244 FN3658-S SNP C -> G AC=1;AN=190;BQB=0.733296;DP=2937;DP4=1524,1284,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52599e-05;MQSB=0.95723;RPB=0.416673;SGB=39.9877;VDB=0.653136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.3:17466896 chr03:017466896 0 W/17466896-17466896 FN3492-S SNP G -> A AC=2;AN=184;BQB=0.965429;DP=3963;DP4=1785,2049,19,30;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.10548e-28;MQSB=0.990933;RPB=0.971998;SGB=162.532;VDB=0.55177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P132L|314|LOC_Os03g30620|protein_coding|CODING|LOC_Os03g30620.1|1|1) FN-207.SNP.3:17467589 chr03:017467589 0 W/17467589-17467589 FN-207 Single Base Substitution T-G INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3452-S.SNP.3:17471752 chr03:017471752 0 W/17471752-17471752 FN3452-S SNP T -> A AC=1;AN=184;BQB=0.941855;DP=3874;DP4=2108,1596,13,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.62803e-09;MQSB=0.994474;RPB=0.823609;SGB=42.7914;VDB=0.482854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D146V|267|LOC_Os03g30640|protein_coding|CODING|LOC_Os03g30640.1|1|1) FN2140-S.SNP.3:17479849 chr03:017479849 0 W/17479849-17479849 FN2140-S SNP T -> G AC=1;AN=168;BQB=0.917557;DP=4147;DP4=2169,1922,22,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.84384e-16;MQSB=0.923578;RPB=0.990936;SGB=-47.4735;VDB=0.0298696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.3:17490342 chr03:017490342 0 W/17490342-17490342 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.445847;DP=5046;DP4=2312,2471,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.91674e-16;MQSB=0.600911;RPB=0.240237;SGB=132.552;VDB=0.720741;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P348S|409|LOC_Os03g30700|protein_coding|CODING|LOC_Os03g30700.1|2|1) FN3666-S.SNP.3:17497959 chr03:017497959 0 W/17497959-17497959 FN3666-S SNP G -> A AC=1;AN=190;BQB=0.999769;DP=3729;DP4=1672,1902,17,12;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.11853;MQB=0.0211675;MQSB=2.63555e-18;RPB=0.525554;SGB=92.9626;VDB=0.363766;EFF=INTRON(MODIFIER||||1760|LOC_Os03g30710|protein_coding|CODING|LOC_Os03g30710.1|2|1) FN2138-S.SNP.3:17498028 chr03:017498028 0 W/17498028-17498028 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.0985911;DP=2870;DP4=1578,1220,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.0592334;MQB=0.26004;MQSB=0.000238531;RPB=0.647032;SGB=-15.3725;VDB=0.429687;EFF=INTRON(MODIFIER||||1760|LOC_Os03g30710|protein_coding|CODING|LOC_Os03g30710.1|2|1) FN565-S.SNP.3:17500410 chr03:017500410 0 W/17500410-17500410 FN565-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g30710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2460.SNP.3:17510775 chr03:017510775 0 W/17510775-17510775 FN2460 SNP G -> A AC=1;AN=200;BQB=0.715024;DP=4424;DP4=2066,2098,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62319e-08;MQSB=0.991262;RPB=0.786699;SGB=24.2746;VDB=0.220923;EFF=INTRON(MODIFIER||||259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|2|1) FN-174.SNP.3:17511407 chr03:017511407 0 W/17511407-17511407 FN-174 Single Base Substitution C-T INTRON HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2180-S.SNP.3:17511581 chr03:017511581 0 W/17511581-17511581 FN2180-S SNP T -> A AC=1;AN=190;BQB=0.271905;DP=4749;DP4=2232,1922,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25304e-06;MQSB=0.577032;RPB=0.981789;SGB=-76.5294;VDB=0.812692;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcA|S167|259|LOC_Os03g30730|protein_coding|CODING|LOC_Os03g30730.1|4|1) FN2269-S.SNP.3:17514641 chr03:017514641 0 W/17514641-17514641 FN2269-S SNP A -> G AC=1;AN=190;BQB=0.862759;DP=5408;DP4=2234,2573,19,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15717e-21;MQSB=0.654923;RPB=0.593558;SGB=-1.03669;VDB=0.342225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.3:17532000 chr03:017532000 0 W/17532000-17532000 FN2314 SNP C -> T AC=2;AN=192;BQB=0.683496;DP=4891;DP4=2569,2043,13,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.60374e-16;MQSB=0.972871;RPB=0.964786;SGB=86.1165;VDB=0.390756;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.3:17533498 chr03:017533498 0 W/17533498-17533498 FN881-S Single Base Substitution C-T INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3781-S.SNP.3:17538215 chr03:017538215 0 W/17538215-17538215 FN3781-S SNP G -> T AC=1;AN=190;BQB=0.994259;DP=2173;DP4=1241,847,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.2839e-06;MQSB=0.210158;RPB=0.569795;SGB=8.33661;VDB=0.364077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.3:17541019 chr03:017541019 0 W/17541019-17541019 FN2271-S SNP A -> G AC=2;AN=190;BQB=0.954544;DP=4664;DP4=2407,1848,31,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.00796e-28;MQSB=0.950833;RPB=0.982985;SGB=123.261;VDB=0.879387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.3:17542637 chr03:017542637 0 W/17542637-17542637 FN3697-S SNP C -> T AC=2;AN=190;BQB=0.287173;DP=3305;DP4=1523,1642,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44343e-12;MQSB=0.759344;RPB=0.655433;SGB=126.511;VDB=0.476298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.3:17544340 chr03:017544340 0 W/17544340-17544340 FN1237-S Single Base Substitution C-A INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN999-S.SNP.3:17557707 chr03:017557707 0 W/17557707-17557707 FN999-S Single Base Substitution T-C INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN1423-S.SNP.3:17557923 chr03:017557923 0 W/17557923-17557923 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4025-S.SNP.3:17559100 chr03:017559100 0 W/17559100-17559100 FN4025-S SNP C -> T AC=1;AN=168;BQB=0.990912;DP=3132;DP4=1149,1841,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.20732e-05;MQSB=0.911123;RPB=0.35893;SGB=38.8805;VDB=0.130263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A90V|268|LOC_Os03g30800|protein_coding|CODING|LOC_Os03g30800.1|2|1) FN3489-S.SNP.3:17565633 chr03:017565633 0 W/17565633-17565633 FN3489-S SNP A -> T AC=2;AN=184;BQB=0.965172;DP=3581;DP4=1872,1534,33,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.02083e-35;MQSB=0.37721;RPB=0.673395;SGB=184.219;VDB=0.0174514;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A155|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|1|1) FN3489-S.SNP.3:17565635 chr03:017565635 0 W/17565635-17565635 FN3489-S SNP C -> A AC=2;AN=184;BQB=0.986053;DP=3533;DP4=1858,1555,35,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.45284e-35;MQSB=0.455623;RPB=0.547095;SGB=255.755;VDB=0.0317587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A155S|1136|LOC_Os03g30810|protein_coding|CODING|LOC_Os03g30810.1|1|1) FN1448-S.SNP.3:17565820 chr03:017565820 0 W/17565820-17565820 FN1448-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g30810 retrotransposon protein, putative, unclassified, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN776-S.SNP.3:17566578 chr03:017566578 0 W/17566578-17566578 FN776-S Single Base Substitution A-T INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN776-S.SNP.3:17566579 chr03:017566579 0 W/17566579-17566579 FN776-S Single Base Substitution A-T INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3889-S.SNP.3:17576489 chr03:017576489 0 W/17576489-17576489 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.634013;DP=2351;DP4=1073,1198,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.31532e-06;MQSB=0.823302;RPB=0.649181;SGB=51.4366;VDB=0.694815;EFF=UTR_5_PRIME(MODIFIER||34||179|LOC_Os03g30840|protein_coding|CODING|LOC_Os03g30840.1|1|1) FN3365-S.SNP.3:17585917 chr03:017585917 0 W/17585917-17585917 FN3365-S SNP T -> A AC=2;AN=184;BQB=0.957069;DP=1764;DP4=768,909,8,13;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0.106576;MQB=0.939037;MQSB=1.31861e-38;RPB=0.999847;SGB=63.9222;VDB=0.767823;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P845|1437|LOC_Os03g30860|protein_coding|CODING|LOC_Os03g30860.1|1|1) FN3319-S.SNP.3:17594045 chr03:017594045 0 W/17594045-17594045 FN3319-S SNP A -> G AC=2;AN=184;BQB=0.924133;DP=2682;DP4=1245,1343,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.86896e-20;MQSB=0.85406;RPB=0.961499;SGB=143.7;VDB=0.377058;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.3:17596548 chr03:017596548 0 W/17596548-17596548 FN594-S Single Base Substitution T-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN4240-S.SNP.3:17598492 chr03:017598492 0 W/17598492-17598492 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.948443;DP=2578;DP4=1228,1297,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.39718e-05;MQSB=0.997422;RPB=0.96435;SGB=30.1021;VDB=0.153811;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E38K|194|LOC_Os03g30880|protein_coding|CODING|LOC_Os03g30880.1|1|1) FN2105-S.SNP.3:17613515 chr03:017613515 0 W/17613515-17613515 FN2105-S SNP A -> G AC=1;AN=168;BQB=0.982582;DP=4003;DP4=2055,1916,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.3102e-11;MQSB=0.952525;RPB=0.995831;SGB=11.3448;VDB=0.345833;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K250|250|LOC_Os03g30920|protein_coding|CODING|LOC_Os03g30920.1|2|1) FN3940-S.SNP.3:17615427 chr03:017615427 0 W/17615427-17615427 FN3940-S SNP G -> A AC=1;AN=158;BQB=0.976315;DP=2502;DP4=1255,1150,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.4499e-07;MQSB=0.405036;RPB=0.668431;SGB=47.0672;VDB=0.750182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.3:17627872 chr03:017627872 0 W/17627872-17627872 FN3457-S SNP A -> G AC=1;AN=184;BQB=0.999099;DP=2742;DP4=1160,1504,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.000728812;MQSB=0.659923;RPB=0.999086;SGB=53.3568;VDB=0.981702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:17627872 chr03:017627872 0 W/17627872-17627872 FN3694-S SNP A -> G AC=2;AN=190;BQB=0.992772;DP=2567;DP4=1102,1382,10,12;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0;MQB=1.44604e-08;MQSB=0.987977;RPB=0.126263;SGB=94.6341;VDB=0.112637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.3:17633791 chr03:017633791 0 W/17633791-17633791 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.963951;DP=3039;DP4=1457,1529,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74023e-06;MQSB=0.967577;RPB=0.853078;SGB=39.699;VDB=0.0643876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.3:17641810 chr03:017641810 0 W/17641810-17641810 FN2545-S SNP A -> C AC=1;AN=198;BQB=0.782603;DP=4287;DP4=2000,2028,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.58796e-05;MQSB=0.281853;RPB=0.225292;SGB=24.1541;VDB=0.521905;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.3:17643327 chr03:017643327 0 W/17643327-17643327 FN692-S Single Base Substitution G-T INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN846-S.SNP.3:17645942 chr03:017645942 0 W/17645942-17645942 FN846-S Single Base Substitution C-T STOP_GAINED HET LOC_Os03g30980 retrotransposon protein, putative, unclassified, expressed SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2475.SNP.3:17646061 chr03:017646061 0 W/17646061-17646061 FN2475 SNP A -> T AC=1;AN=200;BQB=0.0148522;DP=4274;DP4=2096,1608,11,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.74658e-05;MQSB=4.4972e-07;RPB=0.359851;SGB=-97.6745;VDB=0.0440531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T167S|628|LOC_Os03g30980|protein_coding|CODING|LOC_Os03g30980.1|4|1) FN2320.SNP.3:17647686 chr03:017647686 0 W/17647686-17647686 FN2320 SNP C -> A AC=2;AN=192;BQB=0.820174;DP=4324;DP4=2007,1945,17,21;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0;MQB=8.73363e-16;MQSB=0.560844;RPB=0.760505;SGB=125.324;VDB=0.307654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P627H|628|LOC_Os03g30980|protein_coding|CODING|LOC_Os03g30980.1|6|1) CW-631-3-1.SNP.3:17648050 chr03:017648050 0 W/17648050-17648050 CW-631-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN747-S.SNP.3:17648050 chr03:017648050 0 W/17648050-17648050 FN747-S Single Base Substitution C-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2386.SNP.3:17648221 chr03:017648221 0 W/17648221-17648221 FN2386 SNP G -> A AC=1;AN=192;BQB=0.279397;DP=4977;DP4=2166,2512,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200924;MQB=2.91767e-13;MQSB=0.917773;RPB=0.98085;SGB=-9.12519;VDB=0.678507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.3:17656984 chr03:017656984 0 W/17656984-17656984 FN1287-S Single Base Substitution C-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3050-S.SNP.3:17660041 chr03:017660041 0 W/17660041-17660041 FN3050-S SNP G -> A AC=2;AN=184;BQB=0.556702;DP=2575;DP4=1181,1310,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.96155e-11;MQSB=0.999491;RPB=0.675402;SGB=81.5311;VDB=0.106829;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V10|692|LOC_Os03g31000|protein_coding|CODING|LOC_Os03g31000.1|1|1) FN3761-S.SNP.3:17660320 chr03:017660320 0 W/17660320-17660320 FN3761-S SNP A -> G AC=1;AN=190;BQB=0.995963;DP=2486;DP4=1148,1258,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.1556e-07;MQSB=0.999832;RPB=0.970636;SGB=32.5467;VDB=0.253902;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K59E|692|LOC_Os03g31000|protein_coding|CODING|LOC_Os03g31000.1|2|1) FN598-S.SNP.3:17664451 chr03:017664451 0 W/17664451-17664451 FN598-S Single Base Substitution A-C INTRON HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN1506-S.SNP.3:17668128 chr03:017668128 0 W/17668128-17668128 FN1506-S Single Base Substitution C-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1444-S.SNP.3:17669180 chr03:017669180 0 W/17669180-17669180 FN1444-S Single Base Substitution C-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN-361.SNP.3:17676450 chr03:017676450 0 W/17676450-17676450 FN-361 Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3440-S.SNP.3:17688293 chr03:017688293 0 W/17688293-17688293 FN3440-S SNP A -> G AC=1;AN=184;BQB=0.810312;DP=2530;DP4=1102,1203,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000421872;MQSB=0.966159;RPB=0.893391;SGB=10.6662;VDB=0.024476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.3:17692955 chr03:017692955 0 W/17692955-17692955 FN2086-S SNP T -> A AC=2;AN=168;BQB=0.262123;DP=3743;DP4=1766,1909,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.94743e-23;MQSB=0.992395;RPB=0.426381;SGB=185.097;VDB=0.348745;EFF=INTERGENIC(MODIFIER||||||||||1) FN-84.SNP.3:17693803 chr03:017693803 0 W/17693803-17693803 FN-84 Single Base Substitution G-C INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN3965-S.SNP.3:17694455 chr03:017694455 0 W/17694455-17694455 FN3965-S SNP G -> A AC=2;AN=168;BQB=0.488501;DP=3043;DP4=1397,1486,28,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.38089e-24;MQSB=0.955067;RPB=0.919599;SGB=232.849;VDB=0.440074;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.3:17695303 chr03:017695303 0 W/17695303-17695303 FN1643-S Single Base Substitution T-A INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2235-S.SNP.3:17697264 chr03:017697264 0 W/17697264-17697264 FN2235-S SNP C -> T AC=1;AN=190;BQB=0.667451;DP=4746;DP4=2206,2195,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.13057e-16;MQSB=0.94534;RPB=0.520936;SGB=59.414;VDB=0.747355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A140V|618|LOC_Os03g31060|protein_coding|CODING|LOC_Os03g31060.1|3|1) FN_N1-151-1.SNP.3:17715104 chr03:017715104 0 W/17715104-17715104 FN_N1-151-1 Single Base Substitution G-T INTRON HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN799-S.SNP.3:17724912 chr03:017724912 0 W/17724912-17724912 FN799-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g31120 circumsporozoite protein precursor, putative, expressed SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN1482-S.SNP.3:17727896 chr03:017727896 0 W/17727896-17727896 FN1482-S Single Base Substitution A-G INTRON HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1750-S.SNP.3:17728810 chr03:017728810 0 W/17728810-17728810 FN1750-S SNP T -> C AC=1;AN=188;BQB=0.95476;DP=3714;DP4=2157,1527,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21621e-07;MQSB=0.995603;RPB=0.850054;SGB=7.0815;VDB=0.89231;EFF=INTRON(MODIFIER||||1518|LOC_Os03g31134|protein_coding|CODING|LOC_Os03g31134.1|4|1) FN3921-S.SNP.3:17748288 chr03:017748288 0 W/17748288-17748288 FN3921-S SNP G -> A AC=1;AN=158;BQB=0.50779;DP=2469;DP4=1131,1262,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.17056e-05;MQSB=0.991099;RPB=0.854619;SGB=30.704;VDB=0.777163;EFF=INTRON(MODIFIER||||322|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.1|1|1),INTRON(MODIFIER||||244|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.2|1|1),INTRON(MODIFIER||||258|LOC_Os03g31170|protein_coding|CODING|LOC_Os03g31170.3|1|1) FN2330.SNP.3:17748961 chr03:017748961 0 W/17748961-17748961 FN2330 SNP T -> A AC=1;AN=192;BQB=0.980379;DP=3765;DP4=1784,1549,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000166211;MQSB=0.358139;RPB=0.571904;SGB=21.9585;VDB=0.811748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.3:17752493 chr03:017752493 0 W/17752493-17752493 FN1270-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN581-S.SNP.3:17759151 chr03:017759151 0 W/17759151-17759151 FN581-S Single Base Substitution G-A INTRON HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1634-S.SNP.3:17762343 chr03:017762343 0 W/17762343-17762343 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN4066-S.SNP.3:17763771 chr03:017763771 0 W/17763771-17763771 FN4066-S SNP G -> A AC=1;AN=168;BQB=0.994329;DP=2803;DP4=1256,1458,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.187299;MQB=0.0997202;MQSB=0;RPB=0.953413;SGB=38.1788;VDB=0.656765;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L1260|1456|LOC_Os03g31200|protein_coding|CODING|LOC_Os03g31200.1|1|1) FN3359-S.SNP.3:17768740 chr03:017768740 0 W/17768740-17768740 FN3359-S SNP G -> T AC=1;AN=184;BQB=0.794166;DP=2397;DP4=1092,1204,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.35346e-09;MQSB=0.588044;RPB=0.215642;SGB=53.3568;VDB=0.256237;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.3:17775673 chr03:017775673 0 W/17775673-17775673 FN-99 Single Base Substitution G-A INTRON HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3714-S.SNP.3:17778537 chr03:017778537 0 W/17778537-17778537 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.979006;DP=2679;DP4=1511,1040,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.8937e-10;MQSB=0.721858;RPB=0.637438;SGB=76.4186;VDB=0.591982;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.3:17779826 chr03:017779826 0 W/17779826-17779826 FN835-S Single Base Substitution A-G INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. W453-3-1.SNP.3:17785048 chr03:017785048 0 W/17785048-17785048 W453-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN753-S.SNP.3:17788598 chr03:017788598 0 W/17788598-17788598 FN753-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g31240 ZOS3-10 - C2H2 zinc finger protein, expressed SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN1114-S.SNP.3:17795438 chr03:017795438 0 W/17795438-17795438 FN1114-S Single Base Substitution G-A INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2403.SNP.3:17796306 chr03:017796306 0 W/17796306-17796306 FN2403 SNP C -> T AC=1;AN=200;BQB=0.158446;DP=4587;DP4=2056,2277,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.65056e-10;MQSB=0.389832;RPB=0.517228;SGB=52.9314;VDB=0.848231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.3:17797486 chr03:017797486 0 W/17797486-17797486 FN3444-S SNP C -> A AC=1;AN=184;BQB=0.949603;DP=2637;DP4=1446,1136,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.68026e-05;MQSB=0.996418;RPB=0.932671;SGB=35.1773;VDB=0.766668;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.3:17799480 chr03:017799480 0 W/17799480-17799480 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3791-S.SNP.3:17800235 chr03:017800235 0 W/17800235-17800235 FN3791-S SNP C -> T AC=1;AN=190;BQB=0.961927;DP=3000;DP4=1406,1490,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99327e-05;MQSB=0.998768;RPB=0.971978;SGB=25.439;VDB=0.928815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.3:17803416 chr03:017803416 0 W/17803416-17803416 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.982321;DP=2605;DP4=1182,1369,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07933e-10;MQSB=0.998364;RPB=0.998454;SGB=50.1574;VDB=0.386709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.3:17808701 chr03:017808701 0 W/17808701-17808701 FN2583-S SNP A -> T AC=1;AN=200;BQB=0.995526;DP=4304;DP4=2168,1927,12,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000232342;MQB=1.56422e-11;MQSB=1.64953e-15;RPB=0.925945;SGB=28.752;VDB=0.80114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.3:17813155 chr03:017813155 0 W/17813155-17813155 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.10758;DP=2593;DP4=1313,969,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.36114e-08;MQSB=0.850885;RPB=0.62745;SGB=-108.641;VDB=0.0281353;EFF=INTRON(MODIFIER||||150|LOC_Os03g31270|protein_coding|CODING|LOC_Os03g31270.1|1|1) FN2558-S.SNP.3:17814406 chr03:017814406 0 W/17814406-17814406 FN2558-S SNP C -> T AC=1;AN=198;BQB=0.342753;DP=3941;DP4=1727,1939,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.45818e-07;MQSB=0.951062;RPB=0.278656;SGB=7.75428;VDB=0.797755;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.3:17817540 chr03:017817540 0 W/17817540-17817540 FN785-S Single Base Substitution T-C INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1048-S.SNP.3:17820005 chr03:017820005 0 W/17820005-17820005 FN1048-S Single Base Substitution T-C INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN2456.SNP.3:17825902 chr03:017825902 0 W/17825902-17825902 FN2456 SNP T -> G AC=1;AN=200;BQB=0.91396;DP=4329;DP4=2101,1998,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.19183e-08;MQSB=0.982476;RPB=0.995103;SGB=40.2696;VDB=0.810923;EFF=INTRON(MODIFIER||||120|LOC_Os03g31290|protein_coding|CODING|LOC_Os03g31290.1|2|1),INTRON(MODIFIER||||119|LOC_Os03g31290|protein_coding|CODING|LOC_Os03g31290.2|2|1) FN3700-S.SNP.3:17831591 chr03:017831591 0 W/17831591-17831591 FN3700-S SNP A -> T AC=1;AN=190;BQB=0.829745;DP=2838;DP4=1444,1279,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.12775e-07;MQSB=0.981876;RPB=0.800009;SGB=26.2136;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.3:17835288 chr03:017835288 0 W/17835288-17835288 FN2549-S SNP T -> G AC=1;AN=198;BQB=0.422617;DP=4242;DP4=2063,1994,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.46903e-05;MQSB=0.656862;RPB=0.520591;SGB=8.58354;VDB=0.254481;EFF=INTRON(MODIFIER||||978|LOC_Os03g31300|protein_coding|CODING|LOC_Os03g31300.1|6|1) FN3844-S.SNP.3:17841557 chr03:017841557 0 W/17841557-17841557 FN3844-S SNP C -> T AC=2;AN=190;BQB=0.920145;DP=2222;DP4=1132,998,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.23704e-11;MQSB=0.949909;RPB=0.814559;SGB=90.0802;VDB=0.0171082;EFF=INTRON(MODIFIER||||247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.5|3|1),INTRON(MODIFIER||||247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.1|2|1),INTRON(MODIFIER||||247|LOC_Os03g31310|protein_coding|CODING|LOC_Os03g31310.2|2|1) FN728-S.SNP.3:17844202 chr03:017844202 0 W/17844202-17844202 FN728-S Single Base Substitution A-C UTR_5_PRIME HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2433.SNP.3:17845639 chr03:017845639 0 W/17845639-17845639 FN2433 SNP T -> C AC=2;AN=200;BQB=0.902299;DP=4198;DP4=1767,2118,26,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.68482e-32;MQSB=0.75938;RPB=0.0674023;SGB=195.292;VDB=0.412588;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.3:17850088 chr03:017850088 0 W/17850088-17850088 FN964-S Single Base Substitution G-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2142-S.SNP.3:17852713 chr03:017852713 0 W/17852713-17852713 FN2142-S SNP G -> T AC=1;AN=168;BQB=0.00735904;DP=4081;DP4=2097,1930,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.72398e-09;MQSB=0.993166;RPB=0.73506;SGB=-222.321;VDB=0.200477;EFF=UTR_5_PRIME(MODIFIER||951||267|LOC_Os03g31320|protein_coding|CODING|LOC_Os03g31320.1|2|1),INTRON(MODIFIER||||267|LOC_Os03g31320|protein_coding|CODING|LOC_Os03g31320.2|1|1) FN-410.SNP.3:17865562 chr03:017865562 0 W/17865562-17865562 FN-410 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g31360 glutelin, putative, expressed SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN1488-S.SNP.3:17866126 chr03:017866126 0 W/17866126-17866126 FN1488-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3786-S.SNP.3:17869162 chr03:017869162 0 W/17869162-17869162 FN3786-S SNP T -> C AC=1;AN=190;BQB=0.95201;DP=2686;DP4=1217,1378,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07068e-07;MQSB=0.947096;RPB=0.996683;SGB=28.9929;VDB=0.751877;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.3:17875324 chr03:017875324 0 W/17875324-17875324 FN781-S Single Base Substitution C-T INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1476-S.SNP.3:17877359 chr03:017877359 0 W/17877359-17877359 FN1476-S Single Base Substitution G-C INTERGENIC Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN4089-S.SNP.3:17878694 chr03:017878694 0 W/17878694-17878694 FN4089-S SNP C -> A AC=1;AN=182;BQB=0.815445;DP=2730;DP4=1404,1270,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.76233e-06;MQSB=0.915314;RPB=0.563989;SGB=53.1331;VDB=0.51205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.3:17880026 chr03:017880026 0 W/17880026-17880026 FN1062-S Single Base Substitution C-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2419.SNP.3:17886591 chr03:017886591 0 W/17886591-17886591 FN2419 SNP T -> A AC=1;AN=200;BQB=0.742372;DP=4745;DP4=2108,2306,9,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40026e-15;MQSB=0.920784;RPB=0.320214;SGB=132.552;VDB=0.195458;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F302I|1036|LOC_Os03g31400|protein_coding|CODING|LOC_Os03g31400.1|2|1) FN1514-S.SNP.3:17907389 chr03:017907389 0 W/17907389-17907389 FN1514-S Single Base Substitution T-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN-161.SNP.3:17907529 chr03:017907529 0 W/17907529-17907529 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3564-S.SNP.3:17917086 chr03:017917086 0 W/17917086-17917086 FN3564-S SNP A -> G AC=1;AN=188;BQB=0.909118;DP=2725;DP4=1311,1294,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.13049e-08;MQSB=0.965703;RPB=0.685264;SGB=48.979;VDB=0.83435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.3:17924070 chr03:017924070 0 W/17924070-17924070 FN2436 SNP T -> A AC=1;AN=200;BQB=0.924085;DP=4268;DP4=2040,1985,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89019e-14;MQSB=0.719079;RPB=0.985185;SGB=79.9264;VDB=0.63377;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T355|611|LOC_Os03g31446|protein_coding|CODING|LOC_Os03g31446.1|4|1) FN4052-S.SNP.3:17926691 chr03:017926691 0 W/17926691-17926691 FN4052-S SNP T -> A AC=1;AN=168;BQB=0.957;DP=2814;DP4=1329,1350,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4402e-10;MQSB=0.205262;RPB=0.375342;SGB=105.343;VDB=0.436469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.3:17930861 chr03:017930861 0 W/17930861-17930861 FN3557-S SNP C -> G AC=1;AN=188;BQB=0.986984;DP=2312;DP4=1088,1140,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.0129e-08;MQSB=0.794694;RPB=0.835557;SGB=50.1574;VDB=0.516403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1759-S.SNP.3:17932700 chr03:017932700 0 W/17932700-17932700 FN1759-S SNP C -> T AC=1;AN=188;BQB=0.0258293;DP=2643;DP4=1085,1508,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.66194e-08;MQSB=0.92575;RPB=0.597016;SGB=-96.2673;VDB=0.730238;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.3:17944360 chr03:017944360 0 W/17944360-17944360 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1120-S.SNP.3:17944944 chr03:017944944 0 W/17944944-17944944 FN1120-S Single Base Substitution C-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2292.SNP.3:17944944 chr03:017944944 0 W/17944944-17944944 FN2292 SNP C -> T AC=1;AN=192;BQB=0.995322;DP=4948;DP4=2341,2252,18,18;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00485044;MQB=2.27675e-06;MQSB=0.197907;RPB=0.694185;SGB=-165.718;VDB=0.265941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.3:17944944 chr03:017944944 0 W/17944944-17944944 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.993928;DP=3254;DP4=1580,1492,68,28;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0135218;MQB=5.46506e-44;MQSB=0.00100155;RPB=2.1273e-07;SGB=-1136.3;VDB=1.23365e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.3:17944944 chr03:017944944 0 W/17944944-17944944 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.905612;DP=2348;DP4=1126,1106,46,18;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0132027;MQB=1.1755e-25;MQSB=0.000107157;RPB=2.68665e-06;SGB=-913.124;VDB=0.0202944;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.3:17950884 chr03:017950884 0 W/17950884-17950884 FN495-S Single Base Substitution A-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN775-S.SNP.3:17951361 chr03:017951361 0 W/17951361-17951361 FN775-S Single Base Substitution C-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-115.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN-115 Single Base Substitution G-T INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-278.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN-278 Single Base Substitution G-T INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-309.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN-309 Single Base Substitution G-T INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1307-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN1307-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2084-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN2084-S SNP G -> T AC=1;AN=168;BQB=0.0116823;DP=2153;DP4=1041,1091,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0211714;MQSB=0.919934;RPB=0.856785;SGB=14.8923;VDB=0.172273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN2301 SNP G -> T AC=2;AN=192;BQB=0.673142;DP=4722;DP4=2006,2434,16,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.09464e-16;MQSB=0.741102;RPB=0.65406;SGB=-87.4713;VDB=0.712897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN2469 SNP G -> T AC=1;AN=200;BQB=0.84729;DP=4416;DP4=1922,2234,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.33111e-10;MQSB=0.978215;RPB=0.992199;SGB=54.6902;VDB=0.916996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN3288-S SNP G -> T AC=1;AN=184;BQB=0.567514;DP=3293;DP4=1221,1891,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.93567e-06;MQSB=0.0745446;RPB=0.430028;SGB=28.3187;VDB=0.546717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN3592-S SNP G -> T AC=2;AN=188;BQB=0.984556;DP=2960;DP4=996,1825,5,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.30433e-12;MQSB=0.19012;RPB=0.868513;SGB=80.782;VDB=0.991295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN3883-S SNP G -> T AC=2;AN=158;BQB=0.972868;DP=2400;DP4=906,1344,9,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.70655e-10;MQSB=0.206755;RPB=0.988475;SGB=54.2901;VDB=0.926186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN3978-S SNP G -> T AC=1;AN=168;BQB=0.741901;DP=2565;DP4=921,1475,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68726e-06;MQSB=0.25646;RPB=0.979645;SGB=19.7539;VDB=0.108008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN4134-S SNP G -> T AC=2;AN=182;BQB=0.944783;DP=2804;DP4=1170,1508,14,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.71806e-16;MQSB=0.306158;RPB=0.513347;SGB=125.307;VDB=0.12294;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 FN983-S Single Base Substitution G-T INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. W276-2-1.SNP.3:17954274 chr03:017954274 0 W/17954274-17954274 W276-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2310.SNP.3:17957583 chr03:017957583 0 W/17957583-17957583 FN2310 SNP C -> T AC=1;AN=192;BQB=0.99998;DP=4796;DP4=2103,2363,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00208507;MQB=4.38397e-08;MQSB=2.64626e-06;RPB=0.932818;SGB=81.1609;VDB=0.307859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A90T|511|LOC_Os03g31520|protein_coding|CODING|LOC_Os03g31520.1|2|1) FN2102-S.SNP.3:17960279 chr03:017960279 0 W/17960279-17960279 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.448169;DP=4128;DP4=2082,1981,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0358527;MQB=0.0233591;MQSB=2.90852e-33;RPB=0.855044;SGB=-11.4952;VDB=0.357253;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V931|1177|LOC_Os03g31530|protein_coding|CODING|LOC_Os03g31530.1|4|1) FN-167.SNP.3:17963854 chr03:017963854 0 W/17963854-17963854 FN-167 Single Base Substitution A-G INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1007-S.SNP.3:17965008 chr03:017965008 0 W/17965008-17965008 FN1007-S Single Base Substitution A-G INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN4148-S.SNP.3:17987502 chr03:017987502 0 W/17987502-17987502 FN4148-S SNP C -> A AC=2;AN=170;BQB=0.910297;DP=2634;DP4=1251,1285,14,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.74909e-13;MQSB=0.999969;RPB=0.986918;SGB=110.069;VDB=0.384907;EFF=INTRON(MODIFIER||||1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|2|1),INTRON(MODIFIER||||1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|2|1) FN3513-S.SNP.3:17996519 chr03:017996519 0 W/17996519-17996519 FN3513-S SNP G -> A AC=1;AN=188;BQB=0.923739;DP=2816;DP4=1312,1450,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.02591e-08;MQSB=0.996655;RPB=0.51692;SGB=39.5276;VDB=0.881642;EFF=INTRON(MODIFIER||||1369|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.1|11|1),INTRON(MODIFIER||||1272|LOC_Os03g31550|protein_coding|CODING|LOC_Os03g31550.2|11|1) FN3312-S.SNP.3:18006140 chr03:018006140 0 W/18006140-18006140 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.900557;DP=2809;DP4=1448,1230,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.77278e-11;MQSB=0.989445;RPB=0.965592;SGB=98.4821;VDB=0.116647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T486S|1500|LOC_Os03g31560|protein_coding|CODING|LOC_Os03g31560.1|2|1) W423-5-1.SNP.3:18013777 chr03:018013777 0 W/18013777-18013777 W423-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2663-S.SNP.3:18014668 chr03:018014668 0 W/18014668-18014668 FN2663-S SNP G -> C AC=1;AN=200;BQB=0.967743;DP=4678;DP4=2101,2295,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.10265e-08;MQSB=0.982127;RPB=0.885695;SGB=21.6694;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.3:18016682 chr03:018016682 0 W/18016682-18016682 FN4040-S SNP G -> A AC=2;AN=168;BQB=0.94205;DP=2872;DP4=1433,1295,18,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.95562e-15;MQSB=0.759059;RPB=0.471839;SGB=86.2102;VDB=0.473905;EFF=INTRON(MODIFIER||||484|LOC_Os03g31570|protein_coding|CODING|LOC_Os03g31570.1|2|1) FN4087-S.SNP.3:18024623 chr03:018024623 0 W/18024623-18024623 FN4087-S SNP A -> G AC=1;AN=182;BQB=0.997839;DP=3367;DP4=1739,1489,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.07448e-09;MQSB=0.901723;RPB=0.967776;SGB=62.1548;VDB=0.987153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.3:18026476 chr03:018026476 0 W/18026476-18026476 FN3968-S SNP G -> A AC=1;AN=168;BQB=0.980701;DP=1961;DP4=709,1146,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.92098e-06;MQSB=0.43899;RPB=0.959095;SGB=31.3172;VDB=0.844212;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.3:18029848 chr03:018029848 0 W/18029848-18029848 FN856-S Single Base Substitution C-T INTRON HOMO SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN3501-S.SNP.3:18030302 chr03:018030302 0 W/18030302-18030302 FN3501-S SNP C -> A AC=2;AN=188;BQB=0.964168;DP=3317;DP4=1131,2006,5,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.35295e-10;MQSB=0.914196;RPB=0.997277;SGB=64.3306;VDB=0.779403;EFF=INTRON(MODIFIER||||1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|2|1),INTRON(MODIFIER||||1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|2|1) FN3662-S.SNP.3:18033585 chr03:018033585 0 W/18033585-18033585 FN3662-S SNP T -> A AC=1;AN=190;BQB=0.899412;DP=2523;DP4=1277,1135,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.85643e-06;MQSB=0.936614;RPB=0.865061;SGB=28.9929;VDB=0.915891;EFF=INTRON(MODIFIER||||1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|2|1),INTRON(MODIFIER||||1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|2|1) FN2316.SNP.3:18041215 chr03:018041215 0 W/18041215-18041215 FN2316 SNP C -> T AC=1;AN=192;BQB=0.340736;DP=3329;DP4=2307,718,20,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13561e-10;MQSB=0.135558;RPB=0.315661;SGB=19.8696;VDB=0.202332;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T1018|1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|16|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T1014|1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|16|1) FN753-S.SNP.3:18041230 chr03:018041230 0 W/18041230-18041230 FN753-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2500.SNP.3:18041546 chr03:018041546 0 W/18041546-18041546 FN2500 SNP A -> G AC=2;AN=200;BQB=0.952907;DP=4808;DP4=2214,2270,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.1546e-21;MQSB=0.794909;RPB=0.58761;SGB=86.7987;VDB=0.698723;EFF=UTR_3_PRIME(MODIFIER||214||1056|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.1|16|1),UTR_3_PRIME(MODIFIER||214||1052|LOC_Os03g31594|protein_coding|CODING|LOC_Os03g31594.2|16|1) FN1279-S.SNP.3:18042067 chr03:018042067 0 W/18042067-18042067 FN1279-S Single Base Substitution A-T INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-141.SNP.3:18048397 chr03:018048397 0 W/18048397-18048397 FN-141 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g31620 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3826-S.SNP.3:18049458 chr03:018049458 0 W/18049458-18049458 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.459467;DP=2408;DP4=1202,1111,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16082e-05;MQSB=0.960793;RPB=0.97075;SGB=28.9929;VDB=0.363216;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A949|1232|LOC_Os03g31620|protein_coding|CODING|LOC_Os03g31620.1|6|1) FN1582-S.SNP.3:18057435 chr03:018057435 0 W/18057435-18057435 FN1582-S Single Base Substitution C-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN760-S.SNP.3:18059351 chr03:018059351 0 W/18059351-18059351 FN760-S Single Base Substitution G-A INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2655-S.SNP.3:18059633 chr03:018059633 0 W/18059633-18059633 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.296268;DP=4658;DP4=2339,2035,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.86554e-13;MQSB=0.660734;RPB=0.965849;SGB=114.132;VDB=0.705694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.3:18060948 chr03:018060948 0 W/18060948-18060948 FN1732-S SNP C -> A AC=2;AN=188;BQB=0.657804;DP=3512;DP4=1830,1602,28,32;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.9261e-29;MQSB=0.544846;RPB=0.866957;SGB=157.938;VDB=0.859379;EFF=INTRON(MODIFIER||||143|LOC_Os03g31634|protein_coding|CODING|LOC_Os03g31634.1|3|1) FN2659-S.SNP.3:18064005 chr03:018064005 0 W/18064005-18064005 FN2659-S SNP A -> T AC=1;AN=200;BQB=0.000875752;DP=5452;DP4=2793,2517,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.8802e-17;MQSB=0.998216;RPB=0.261545;SGB=52.9314;VDB=0.769947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:18064007 chr03:018064007 0 W/18064007-18064007 FN2659-S SNP T -> G AC=1;AN=200;BQB=0.0111975;DP=5443;DP4=2736,2498,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34687e-18;MQSB=0.997181;RPB=0.972213;SGB=-75.0485;VDB=0.872827;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.3:18068328 chr03:018068328 0 W/18068328-18068328 FN831-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g31640 retrotransposon protein, putative, unclassified, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2619-S.SNP.3:18071965 chr03:018071965 0 W/18071965-18071965 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.928241;DP=4052;DP4=1965,1838,14,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.06729e-20;MQSB=0.75785;RPB=0.745439;SGB=126.432;VDB=0.215034;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V884M|1227|LOC_Os03g31650|protein_coding|CODING|LOC_Os03g31650.1|3|1) FN1423-S.SNP.3:18077755 chr03:018077755 0 W/18077755-18077755 FN1423-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2594-S.SNP.3:18081287 chr03:018081287 0 W/18081287-18081287 FN2594-S SNP G -> T AC=1;AN=198;BQB=0.98809;DP=4324;DP4=2063,2048,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000231267;MQB=1.92897e-08;MQSB=0.955358;RPB=0.321561;SGB=36.5539;VDB=0.0453276;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L404|571|LOC_Os03g31660|protein_coding|CODING|LOC_Os03g31660.1|2|1) FN775-S.SNP.3:18082797 chr03:018082797 0 W/18082797-18082797 FN775-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g31670 hypothetical protein SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN1271-S.SNP.3:18088109 chr03:018088109 0 W/18088109-18088109 FN1271-S Single Base Substitution T-A INTRON HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN3446-S.SNP.3:18089198 chr03:018089198 0 W/18089198-18089198 FN3446-S SNP A -> T AC=1;AN=184;BQB=0.942894;DP=2540;DP4=1228,1227,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.01779e-09;MQSB=0.978062;RPB=0.318671;SGB=66.8296;VDB=0.116755;EFF=INTRON(MODIFIER||||576|LOC_Os03g31690|protein_coding|CODING|LOC_Os03g31690.1|6|1) FN1282-S.SNP.3:18090985 chr03:018090985 0 W/18090985-18090985 FN1282-S Single Base Substitution G-C INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2221-S.SNP.3:18093338 chr03:018093338 0 W/18093338-18093338 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.997606;DP=4749;DP4=2021,2385,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09155e-05;MQSB=0.837053;RPB=0.452454;SGB=44.5415;VDB=0.761916;EFF=INTRON(MODIFIER||||576|LOC_Os03g31690|protein_coding|CODING|LOC_Os03g31690.1|1|1) FN1724-S.SNP.3:18094849 chr03:018094849 0 W/18094849-18094849 FN1724-S SNP C -> T AC=2;AN=188;BQB=0.563492;DP=2669;DP4=1367,1252,18,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.05494e-10;MQSB=0.997186;RPB=0.935507;SGB=-7.39363;VDB=0.0674187;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.3:18097093 chr03:018097093 0 W/18097093-18097093 FN1376-S Single Base Substitution C-T INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN1617-S.SNP.3:18101646 chr03:018101646 0 W/18101646-18101646 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN-178.SNP.3:18105316 chr03:018105316 0 W/18105316-18105316 FN-178 Single Base Substitution G-A INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1188-S.SNP.3:18107334 chr03:018107334 0 W/18107334-18107334 FN1188-S Single Base Substitution C-T INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3780-S.SNP.3:18107334 chr03:018107334 0 W/18107334-18107334 FN3780-S SNP C -> T AC=2;AN=190;BQB=0.99678;DP=2940;DP4=1335,1495,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.7049e-11;MQSB=0.963662;RPB=0.160855;SGB=80.9724;VDB=0.282371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.3:18108554 chr03:018108554 0 W/18108554-18108554 FN2358 SNP G -> A AC=2;AN=192;BQB=0.357727;DP=4823;DP4=2294,2095,19,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.90448e-16;MQSB=0.945324;RPB=0.806807;SGB=-5.17475;VDB=0.0142009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.3:18111105 chr03:018111105 0 W/18111105-18111105 FN3292-S SNP G -> A AC=2;AN=184;BQB=0.999968;DP=2706;DP4=1327,1280,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.38606e-13;MQSB=0.999133;RPB=0.534909;SGB=93.9603;VDB=0.854347;EFF=UTR_5_PRIME(MODIFIER||6||76|LOC_Os03g31706|protein_coding|CODING|LOC_Os03g31706.2|3|1) W463-2-1.SNP.3:18111688 chr03:018111688 0 W/18111688-18111688 W463-2-1 Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN404-S.SNP.3:18112659 chr03:018112659 0 W/18112659-18112659 FN404-S Single Base Substitution A-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3921-S.SNP.3:18117882 chr03:018117882 0 W/18117882-18117882 FN3921-S SNP G -> A AC=1;AN=158;BQB=0.99951;DP=2740;DP4=1246,1379,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.9983e-08;MQSB=0.765962;RPB=0.999521;SGB=37.4429;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.3:18124810 chr03:018124810 0 W/18124810-18124810 FN-101 Single Base Substitution G-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3354-S.SNP.3:18126236 chr03:018126236 0 W/18126236-18126236 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.635123;DP=2637;DP4=1351,1175,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000758438;MQB=0.000192453;MQSB=0.946422;RPB=0.888169;SGB=21.6609;VDB=0.889084;EFF=INTRON(MODIFIER||||885|LOC_Os03g31730|protein_coding|CODING|LOC_Os03g31730.1|2|1) FN4010-S.SNP.3:18143834 chr03:018143834 0 W/18143834-18143834 FN4010-S SNP T -> A AC=1;AN=168;BQB=0.993524;DP=2454;DP4=1142,1215,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.75525e-07;MQSB=0.865923;RPB=0.359621;SGB=5.62151;VDB=0.835487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.3:18147212 chr03:018147212 0 W/18147212-18147212 FN2625-S SNP A -> T AC=1;AN=200;BQB=0.841923;DP=5051;DP4=2645,2203,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.55187e-12;MQSB=0.996962;RPB=0.745837;SGB=86.5007;VDB=0.726941;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.3:18154591 chr03:018154591 0 W/18154591-18154591 FN-332 Single Base Substitution A-G INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1368-S.SNP.3:18157017 chr03:018157017 0 W/18157017-18157017 FN1368-S Single Base Substitution T-C INTRON HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2533-S.SNP.3:18157017 chr03:018157017 0 W/18157017-18157017 FN2533-S SNP T -> C AC=2;AN=198;BQB=0.929927;DP=4316;DP4=2289,1804,16,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.43194e-16;MQSB=0.93341;RPB=0.996355;SGB=68.2711;VDB=0.713129;EFF=INTRON(MODIFIER||||887|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.1|6|1),INTRON(MODIFIER||||728|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.2|5|1),INTRON(MODIFIER||||892|LOC_Os03g31750|protein_coding|CODING|LOC_Os03g31750.3|6|1) FN1583-S.SNP.3:18158332 chr03:018158332 0 W/18158332-18158332 FN1583-S Single Base Substitution T-G INTRON HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1297-S.SNP.3:18158365 chr03:018158365 0 W/18158365-18158365 FN1297-S Single Base Substitution T-C INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-200.SNP.3:18162644 chr03:018162644 0 W/18162644-18162644 FN-200 Single Base Substitution A-T INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN770-S.SNP.3:18174266 chr03:018174266 0 W/18174266-18174266 FN770-S Single Base Substitution G-T INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1023-S.SNP.3:18174366 chr03:018174366 0 W/18174366-18174366 FN1023-S Single Base Substitution G-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2488.SNP.3:18176125 chr03:018176125 0 W/18176125-18176125 FN2488 SNP G -> A AC=2;AN=200;BQB=0.790321;DP=4118;DP4=1997,1746,21,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.58081e-18;MQSB=0.871636;RPB=0.995925;SGB=108.768;VDB=0.963178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.3:18176235 chr03:018176235 0 W/18176235-18176235 FN2349 SNP G -> A AC=1;AN=192;BQB=0.696386;DP=4771;DP4=2080,2373,16,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.36533e-20;MQSB=0.999083;RPB=0.871297;SGB=-81.7287;VDB=0.544174;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.3:18187881 chr03:018187881 0 W/18187881-18187881 FN2357 SNP T -> C AC=1;AN=192;BQB=0.500803;DP=4756;DP4=2358,2021,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.73843e-14;MQSB=0.860475;RPB=0.100059;SGB=-77.4217;VDB=0.358231;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.3:18193467 chr03:018193467 0 W/18193467-18193467 FN_807-3-1 Single Base Substitution G-T Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1293-S.SNP.3:18197027 chr03:018197027 0 W/18197027-18197027 FN1293-S Single Base Substitution G-A INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN2383.SNP.3:18197693 chr03:018197693 0 W/18197693-18197693 FN2383 SNP G -> T AC=1;AN=192;BQB=0.348464;DP=4088;DP4=2038,1786,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.41664e-06;MQSB=0.999781;RPB=0.521477;SGB=8.3993;VDB=0.650146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.3:18202910 chr03:018202910 0 W/18202910-18202910 FN3510-S SNP G -> C AC=1;AN=188;BQB=0.984056;DP=3964;DP4=1434,2409,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00025227;MQB=1.817e-08;MQSB=0.0543374;RPB=0.942631;SGB=71.6954;VDB=0.436637;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.3:18203167 chr03:018203167 0 W/18203167-18203167 FN558-S Single Base Substitution A-G INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-53.SNP.3:18213558 chr03:018213558 0 W/18213558-18213558 FN-53 Single Base Substitution T-C INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN3804-S.SNP.3:18228437 chr03:018228437 0 W/18228437-18228437 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.605749;DP=2333;DP4=1218,1016,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76995e-07;MQSB=0.845357;RPB=0.433574;SGB=53.6492;VDB=0.568958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.3:18232244 chr03:018232244 0 W/18232244-18232244 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.979979;DP=4367;DP4=1917,2207,7,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.67317e-14;MQSB=0.926543;RPB=0.721712;SGB=18.9201;VDB=0.903303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.3:18233471 chr03:018233471 0 W/18233471-18233471 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.872413;DP=4821;DP4=2360,2235,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.00906e-12;MQSB=0.580121;RPB=0.591616;SGB=58.2954;VDB=0.148054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.3:18239542 chr03:018239542 0 W/18239542-18239542 FN1258-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g31880 SHORT-ROOT, putative, expressed SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1476-S.SNP.3:18242772 chr03:018242772 0 W/18242772-18242772 FN1476-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3833-S.SNP.3:18252043 chr03:018252043 0 W/18252043-18252043 FN3833-S SNP C -> A AC=2;AN=190;BQB=0.794548;DP=2501;DP4=923,1486,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.72514e-13;MQSB=0.839578;RPB=0.0244319;SGB=103.742;VDB=0.0736881;EFF=INTRON(MODIFIER||||678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|4|1) FN1764-S.SNP.3:18253857 chr03:018253857 0 W/18253857-18253857 FN1764-S SNP A -> G AC=1;AN=188;BQB=0.156379;DP=2400;DP4=1131,1247,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000416667;MQB=0.000165556;MQSB=0.128983;RPB=0.138054;SGB=18.4463;VDB=0.122248;EFF=INTRON(MODIFIER||||678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|6|1) FN2478.SNP.3:18253975 chr03:018253975 0 W/18253975-18253975 FN2478 SNP G -> A AC=1;AN=200;BQB=0.989697;DP=4712;DP4=2164,2223,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34272e-12;MQSB=0.971118;RPB=0.764742;SGB=72.7161;VDB=0.508267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D667N|678|LOC_Os03g31910|protein_coding|CODING|LOC_Os03g31910.1|7|1) FN2449.SNP.3:18258225 chr03:018258225 0 W/18258225-18258225 FN2449 SNP C -> A AC=1;AN=200;BQB=0.96031;DP=4482;DP4=2206,2048,5,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000223115;MQB=2.45304e-06;MQSB=0.935801;RPB=0.415619;SGB=58.8698;VDB=0.0350426;EFF=INTRON(MODIFIER||||671|LOC_Os03g31930|protein_coding|CODING|LOC_Os03g31930.1|2|1) FN2593-S.SNP.3:18259312 chr03:018259312 0 W/18259312-18259312 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.846276;DP=4005;DP4=1889,1906,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42331e-17;MQSB=0.680718;RPB=0.986428;SGB=97.671;VDB=0.633655;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V553|671|LOC_Os03g31930|protein_coding|CODING|LOC_Os03g31930.1|3|1) FN1216-S.SNP.3:18262674 chr03:018262674 0 W/18262674-18262674 FN1216-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN2449.SNP.3:18265445 chr03:018265445 0 W/18265445-18265445 FN2449 SNP G -> T AC=1;AN=200;BQB=0.999551;DP=4639;DP4=2431,1955,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.74225e-14;MQSB=0.999453;RPB=0.632259;SGB=69.1109;VDB=0.222071;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.3:18279296 chr03:018279296 0 W/18279296-18279296 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.60945;DP=4921;DP4=2322,2286,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000203211;MQB=0.0100968;MQSB=0.00284005;RPB=0.335629;SGB=23.6597;VDB=0.723986;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R208|213|LOC_Os03g31944|protein_coding|CODING|LOC_Os03g31944.1|3|1) FN1072-S.SNP.3:18279693 chr03:018279693 0 W/18279693-18279693 FN1072-S Single Base Substitution T-G SPLICE_SITE_ACCEPTOR HET LOC_Os03g31944 expressed protein SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2360.SNP.3:18280488 chr03:018280488 0 W/18280488-18280488 FN2360 SNP G -> A AC=1;AN=192;BQB=0.3042;DP=4328;DP4=2310,1739,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.5802e-09;MQSB=0.0365909;RPB=0.996589;SGB=64.7304;VDB=0.584321;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D16N|175|LOC_Os03g31950|protein_coding|CODING|LOC_Os03g31950.1|1|1) FN433-S.SNP.3:18280828 chr03:018280828 0 W/18280828-18280828 FN433-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g31950 keratin, putative, expressed SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN853-S.SNP.3:18281431 chr03:018281431 0 W/18281431-18281431 FN853-S Single Base Substitution T-A INTRON HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN853-S.SNP.3:18281432 chr03:018281432 0 W/18281432-18281432 FN853-S Single Base Substitution C-A INTRON HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN2455.SNP.3:18287280 chr03:018287280 0 W/18287280-18287280 FN2455 SNP T -> A AC=1;AN=200;BQB=0.913266;DP=4557;DP4=2234,1944,15,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=3.16533e-05;MQSB=0.924501;RPB=0.220689;SGB=17.5158;VDB=0.25689;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N103Y|362|LOC_Os03g31980|protein_coding|CODING|LOC_Os03g31980.1|1|1) FN979-S.SNP.3:18289894 chr03:018289894 0 W/18289894-18289894 FN979-S Single Base Substitution G-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN914-S.SNP.3:18290959 chr03:018290959 0 W/18290959-18290959 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3920-S.SNP.3:18310963 chr03:018310963 0 W/18310963-18310963 FN3920-S SNP C -> T AC=2;AN=158;BQB=0.635998;DP=2236;DP4=1334,802,12,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.89952e-07;MQSB=0.526832;RPB=0.122871;SGB=77.6532;VDB=0.074264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.3:18313720 chr03:018313720 0 W/18313720-18313720 FN3599-S SNP G -> A AC=2;AN=188;BQB=0.958623;DP=2904;DP4=1211,1613,19,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000344353;MQB=2.54965e-19;MQSB=0.744254;RPB=0.450125;SGB=153.475;VDB=0.85964;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.3:18324432 chr03:018324432 0 W/18324432-18324432 FN819-S Single Base Substitution A-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3798-S.SNP.3:18327777 chr03:018327777 0 W/18327777-18327777 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.922382;DP=3282;DP4=1481,1683,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.09121e-11;MQSB=0.786481;RPB=0.835972;SGB=99.1879;VDB=0.0121657;EFF=INTRON(MODIFIER||||335|LOC_Os03g32050|protein_coding|CODING|LOC_Os03g32050.1|3|1) FN4038-S.SNP.3:18336727 chr03:018336727 0 W/18336727-18336727 FN4038-S SNP C -> T AC=1;AN=168;BQB=0.627639;DP=2261;DP4=1356,790,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0959752;MQB=0.0665926;MQSB=0.0987783;RPB=0.633718;SGB=51.902;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.3:18347633 chr03:018347633 0 W/18347633-18347633 FN534-S Single Base Substitution A-T INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN2670-S.SNP.3:18373226 chr03:018373226 0 W/18373226-18373226 FN2670-S SNP C -> T AC=2;AN=200;BQB=0.116094;DP=5653;DP4=2734,2512,41,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.60945e-39;MQSB=0.0100556;RPB=0.540742;SGB=180.585;VDB=0.305516;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.3:18447262 chr03:018447262 0 W/18447262-18447262 FN1281-S Single Base Substitution A-G INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1571-S.SNP.3:18495590 chr03:018495590 0 W/18495590-18495590 FN1571-S Single Base Substitution G-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2412.SNP.3:18508502 chr03:018508502 0 W/18508502-18508502 FN2412 SNP G -> T AC=1;AN=200;BQB=0.898574;DP=4050;DP4=1582,2209,4,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.23092e-06;MQSB=0.00959327;RPB=0.64062;SGB=58.8698;VDB=0.4922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.3:18509281 chr03:018509281 0 W/18509281-18509281 FN1324-S Single Base Substitution G-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN4148-S.SNP.3:18513064 chr03:018513064 0 W/18513064-18513064 FN4148-S SNP C -> A AC=2;AN=170;BQB=0.986254;DP=2799;DP4=1294,1415,20,16;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00714541;MQB=1.78174e-10;MQSB=0.0572534;RPB=0.26798;SGB=154.496;VDB=0.13793;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P298Q|403|LOC_Os03g32360|protein_coding|CODING|LOC_Os03g32360.1|1|1) FN631-S.SNP.3:18521340 chr03:018521340 0 W/18521340-18521340 FN631-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3477-S.SNP.3:18521539 chr03:018521539 0 W/18521539-18521539 FN3477-S SNP G -> T AC=1;AN=184;BQB=0.941654;DP=3122;DP4=1537,1491,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.07784e-09;MQSB=0.999999;RPB=0.789641;SGB=38.4058;VDB=0.226438;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V222F|934|LOC_Os03g32380|protein_coding|CODING|LOC_Os03g32380.1|2|1) FN3325-S.SNP.3:18522964 chr03:018522964 0 W/18522964-18522964 FN3325-S SNP C -> T AC=1;AN=184;BQB=0.619373;DP=3373;DP4=1795,1472,16,17;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0148236;MQB=0.149;MQSB=0.998761;RPB=0.941584;SGB=143.7;VDB=0.634537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S625L|934|LOC_Os03g32380|protein_coding|CODING|LOC_Os03g32380.1|4|1) FN_829-2-5.SNP.3:18523120 chr03:018523120 0 W/18523120-18523120 FN_829-2-5 Single Base Substitution G-T Homo LOC_Os03g32380 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN447-S.SNP.3:18523917 chr03:018523917 0 W/18523917-18523917 FN447-S Single Base Substitution C-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN3377-S.SNP.3:18536501 chr03:018536501 0 W/18536501-18536501 FN3377-S SNP C -> G AC=1;AN=184;BQB=0.959642;DP=2696;DP4=1289,1300,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.13408e-09;MQSB=0.985393;RPB=0.999969;SGB=57.786;VDB=0.79373;EFF=INTRON(MODIFIER||||108|LOC_Os03g32410|protein_coding|CODING|LOC_Os03g32410.1|3|1) FN919-S.SNP.3:18548193 chr03:018548193 0 W/18548193-18548193 FN919-S Single Base Substitution G-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN4090-S.SNP.3:18549048 chr03:018549048 0 W/18549048-18549048 FN4090-S SNP C -> G AC=1;AN=182;BQB=0.989297;DP=2288;DP4=1456,770,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.51382e-07;MQSB=0.521731;RPB=0.936115;SGB=28.6061;VDB=0.759427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.3:18549440 chr03:018549440 0 W/18549440-18549440 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.888548;DP=2777;DP4=1519,1145,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2612e-08;MQSB=0.974073;RPB=0.428468;SGB=18.552;VDB=0.823453;EFF=UTR_3_PRIME(MODIFIER||686||321|LOC_Os03g32440|protein_coding|CODING|LOC_Os03g32440.1|3|1) FN2681-S.SNP.3:18551396 chr03:018551396 0 W/18551396-18551396 FN2681-S SNP A -> G AC=1;AN=200;BQB=0.999035;DP=4863;DP4=2339,2142,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.61334e-15;MQSB=0.962155;RPB=0.934213;SGB=79.9264;VDB=0.343393;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G65|321|LOC_Os03g32440|protein_coding|CODING|LOC_Os03g32440.1|2|1) FN3487-S.SNP.3:18553565 chr03:018553565 0 W/18553565-18553565 FN3487-S SNP C -> A AC=1;AN=184;BQB=0.979088;DP=3933;DP4=1807,1983,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.36758e-12;MQSB=0.00160345;RPB=0.874231;SGB=107.526;VDB=0.0921711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.3:18563174 chr03:018563174 0 W/18563174-18563174 FN2328 SNP G -> A AC=1;AN=192;BQB=0.248577;DP=4616;DP4=2031,2301,21,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.08864e-15;MQSB=0.985761;RPB=0.719775;SGB=-4.04606;VDB=0.604621;EFF=INTERGENIC(MODIFIER||||||||||1) FN1515-S.SNP.3:18563763 chr03:018563763 0 W/18563763-18563763 FN1515-S Single Base Substitution A-T INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN436-S.SNP.3:18565774 chr03:018565774 0 W/18565774-18565774 FN436-S Single Base Substitution G-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN885-S.SNP.3:18567176 chr03:018567176 0 W/18567176-18567176 FN885-S Single Base Substitution C-T INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3659-S.SNP.3:18584766 chr03:018584766 0 W/18584766-18584766 FN3659-S SNP A -> G AC=1;AN=190;BQB=0.844254;DP=2820;DP4=1378,1332,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.53878e-07;MQSB=0.00310488;RPB=0.124818;SGB=21.1058;VDB=0.155184;EFF=INTRON(MODIFIER||||90|LOC_Os03g32499|protein_coding|CODING|LOC_Os03g32499.1|2|1) FN916-S.SNP.3:18614958 chr03:018614958 0 W/18614958-18614958 FN916-S Single Base Substitution G-A INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN463-S.SNP.3:18617610 chr03:018617610 0 W/18617610-18617610 FN463-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g32550 retrotransposon protein, putative, unclassified, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2634-S.SNP.3:18617726 chr03:018617726 0 W/18617726-18617726 FN2634-S SNP T -> C AC=1;AN=200;BQB=0.382972;DP=4579;DP4=2218,2086,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00262066;MQB=9.05724e-18;MQSB=0.172395;RPB=0.984116;SGB=101.557;VDB=0.643747;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V591|658|LOC_Os03g32550|protein_coding|CODING|LOC_Os03g32550.1|2|1) FN2721-S.SNP.3:18620591 chr03:018620591 0 W/18620591-18620591 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.229874;DP=5079;DP4=2127,2721,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000113634;MQSB=0.985927;RPB=0.581235;SGB=40.4492;VDB=0.865097;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D186|746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|3|1) FN3914-S.SNP.3:18620953 chr03:018620953 0 W/18620953-18620953 FN3914-S SNP C -> T AC=1;AN=158;BQB=0.538853;DP=2631;DP4=1247,1277,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000103482;MQSB=0.985215;RPB=0.639453;SGB=30.704;VDB=0.928309;EFF=INTRON(MODIFIER||||746|LOC_Os03g32560|protein_coding|CODING|LOC_Os03g32560.1|2|1) FN-102.SNP.3:18626071 chr03:018626071 0 W/18626071-18626071 FN-102 Single Base Substitution C-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2352.SNP.3:18629220 chr03:018629220 0 W/18629220-18629220 FN2352 SNP G -> A AC=1;AN=192;BQB=0.224536;DP=4617;DP4=2064,2195,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.35087e-10;MQSB=0.855856;RPB=0.895827;SGB=99.4183;VDB=0.473987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.3:18632069 chr03:018632069 0 W/18632069-18632069 FN1452-S Single Base Substitution T-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2310.SNP.3:18632222 chr03:018632222 0 W/18632222-18632222 FN2310 SNP C -> T AC=1;AN=192;BQB=0.97386;DP=4341;DP4=1752,2265,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.72643e-15;MQSB=0.616957;RPB=0.991151;SGB=51.9931;VDB=0.997198;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.3:18633355 chr03:018633355 0 W/18633355-18633355 FN3288-S SNP A -> G AC=1;AN=184;BQB=0.683249;DP=3244;DP4=1336,1730,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.85995e-09;MQSB=0.910025;RPB=0.708768;SGB=57.786;VDB=0.78371;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.3:18638230 chr03:018638230 0 W/18638230-18638230 FN-301 Single Base Substitution A-C UTR_3_PRIME HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN4304-S.SNP.3:18645561 chr03:018645561 0 W/18645561-18645561 FN4304-S SNP C -> A AC=1;AN=170;BQB=0.996785;DP=2645;DP4=1251,1334,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.81604e-06;MQSB=0.998654;RPB=0.949512;SGB=34.5445;VDB=0.742057;EFF=INTRON(MODIFIER||||819|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.1|2|1),INTRON(MODIFIER||||685|LOC_Os03g32590|protein_coding|CODING|LOC_Os03g32590.2|2|1) FN_N1-119-1.SNP.3:18646797 chr03:018646797 0 W/18646797-18646797 FN_N1-119-1 Single Base Substitution T-A Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2352.SNP.3:18650528 chr03:018650528 0 W/18650528-18650528 FN2352 SNP G -> A AC=1;AN=192;BQB=0.823654;DP=4182;DP4=1647,2230,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.86446e-09;MQSB=0.0162955;RPB=0.780511;SGB=54.0374;VDB=0.158996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.3:18657697 chr03:018657697 0 W/18657697-18657697 FN-108 Single Base Substitution C-A INTRON HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN4179-S.SNP.3:18664319 chr03:018664319 0 W/18664319-18664319 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.523887;DP=2622;DP4=1421,1077,26,13;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.32923e-10;MQSB=0.298504;RPB=0.810847;SGB=167.824;VDB=0.758905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.3:18668882 chr03:018668882 0 W/18668882-18668882 FN1124-S Single Base Substitution A-G INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1521-S.SNP.3:18672999 chr03:018672999 0 W/18672999-18672999 FN1521-S Single Base Substitution A-T INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1449-S.SNP.3:18673589 chr03:018673589 0 W/18673589-18673589 FN1449-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN3490-S.SNP.3:18687970 chr03:018687970 0 W/18687970-18687970 FN3490-S SNP T -> C AC=2;AN=184;BQB=0.733932;DP=2413;DP4=1128,1186,15,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.77502e-16;MQSB=0.940077;RPB=0.649259;SGB=-5.32182;VDB=0.987497;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G444|710|LOC_Os03g32630|protein_coding|CODING|LOC_Os03g32630.1|1|1) FN2653-S.SNP.3:18693802 chr03:018693802 0 W/18693802-18693802 FN2653-S SNP A -> G AC=1;AN=200;BQB=0.929675;DP=4658;DP4=2032,2336,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.13268e-15;MQSB=0.568308;RPB=0.871776;SGB=58.1418;VDB=0.0498313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN1243-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1344-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN1344-S Single Base Substitution G-C INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1556-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN1556-S Single Base Substitution G-C INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1716-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN1716-S SNP G -> C AC=2;AN=188;BQB=0.101872;DP=2993;DP4=1443,1498,28,12;HOB=0.0210502;ICB=0.494738;MQ=24;MQ0F=0.117942;MQB=0.0617565;MQSB=0.911994;RPB=0.37047;SGB=-46.4986;VDB=0.835744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN2268-S SNP G -> C AC=2;AN=190;BQB=0.669539;DP=5234;DP4=2634,2189,27,24;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0141383;MQB=0.0139472;MQSB=1.45879e-07;RPB=0.735647;SGB=115.599;VDB=0.0150033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN2461 SNP G -> C AC=2;AN=200;BQB=0.764397;DP=4998;DP4=2631,2035,20,25;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0116046;MQB=0.035157;MQSB=0.00536384;RPB=0.992735;SGB=152.03;VDB=0.5433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN3593-S SNP G -> C AC=1;AN=190;BQB=0.882679;DP=3202;DP4=1740,1348,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0181137;MQB=0.145754;MQSB=0.990865;RPB=0.731364;SGB=33.8752;VDB=0.500962;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN3964-S SNP G -> C AC=1;AN=168;BQB=0.995;DP=3248;DP4=1817,1306,16,8;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0184729;MQB=0.496341;MQSB=0.880697;RPB=0.0483365;SGB=44.0621;VDB=0.164755;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN4312-S SNP G -> C AC=1;AN=170;BQB=0.950575;DP=2820;DP4=1551,1201,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.020922;MQB=0.251301;MQSB=0.121147;RPB=0.999847;SGB=41.7633;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN505-S Single Base Substitution G-C INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN901-S.SNP.3:18699629 chr03:018699629 0 W/18699629-18699629 FN901-S Single Base Substitution G-C INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1486-S.SNP.3:18700891 chr03:018700891 0 W/18700891-18700891 FN1486-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g32650 transposon protein, putative, unclassified, expressed SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN3368-S.SNP.3:18702130 chr03:018702130 0 W/18702130-18702130 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.533006;DP=3666;DP4=1904,1682,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0799236;MQB=0.93947;MQSB=1.15495e-06;RPB=0.557422;SGB=56.8786;VDB=0.8866;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S1143|1530|LOC_Os03g32650|protein_coding|CODING|LOC_Os03g32650.1|4|1) FN3502-S.SNP.3:18703515 chr03:018703515 0 W/18703515-18703515 FN3502-S SNP G -> C AC=1;AN=188;BQB=0.962289;DP=3627;DP4=1702,1862,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.315688;MQB=0.112541;MQSB=0;RPB=0.0372902;SGB=48.979;VDB=0.125621;EFF=INTRON(MODIFIER||||1530|LOC_Os03g32650|protein_coding|CODING|LOC_Os03g32650.1|1|1) FN513-S.SNP.3:18704438 chr03:018704438 0 W/18704438-18704438 FN513-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g32650 transposon protein, putative, unclassified, expressed SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN884-S.SNP.3:18705483 chr03:018705483 0 W/18705483-18705483 FN884-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g32650 transposon protein, putative, unclassified, expressed SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN2665-S.SNP.3:18708023 chr03:018708023 0 W/18708023-18708023 FN2665-S SNP C -> G AC=1;AN=200;BQB=0.731462;DP=4614;DP4=2035,2290,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76402e-07;MQSB=0.412082;RPB=0.973676;SGB=49.6594;VDB=0.065806;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.3:18708901 chr03:018708901 0 W/18708901-18708901 FN912-S Single Base Substitution C-T INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN1448-S.SNP.3:18710991 chr03:018710991 0 W/18710991-18710991 FN1448-S Single Base Substitution G-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN509-S.SNP.3:18711105 chr03:018711105 0 W/18711105-18711105 FN509-S Single Base Substitution G-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1272-S.SNP.3:18712750 chr03:018712750 0 W/18712750-18712750 FN1272-S Single Base Substitution G-A INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN3530-S.SNP.3:18714049 chr03:018714049 0 W/18714049-18714049 FN3530-S SNP G -> C AC=2;AN=188;BQB=0.927774;DP=3070;DP4=1465,1446,23,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000325733;MQB=1.73355e-22;MQSB=0.610226;RPB=0.217132;SGB=194.364;VDB=0.70803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.3:18714187 chr03:018714187 0 W/18714187-18714187 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3940-S.SNP.3:18721629 chr03:018721629 0 W/18721629-18721629 FN3940-S SNP G -> T AC=1;AN=158;BQB=0.987824;DP=2379;DP4=1098,1206,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.25714e-06;MQSB=0.772805;RPB=0.65912;SGB=23.9652;VDB=0.543076;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.3:18733557 chr03:018733557 0 W/18733557-18733557 FN4153-S SNP G -> T AC=2;AN=170;BQB=0.9955;DP=2706;DP4=1214,1409,12,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15541e-13;MQSB=0.854543;RPB=0.786295;SGB=44.3104;VDB=0.7738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.3:18734999 chr03:018734999 0 W/18734999-18734999 FN3553-S SNP T -> A AC=1;AN=188;BQB=0.957532;DP=2777;DP4=1258,1414,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000360101;MQB=1.44898e-05;MQSB=0.597647;RPB=0.851614;SGB=35.3493;VDB=0.230053;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.3:18735000 chr03:018735000 0 W/18735000-18735000 FN3553-S SNP T -> A AC=1;AN=188;BQB=0.847493;DP=2782;DP4=1271,1400,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000359454;MQB=2.21612e-06;MQSB=0.574183;RPB=0.992013;SGB=0.908326;VDB=0.0363045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.3:18736288 chr03:018736288 0 W/18736288-18736288 FN1385-S Single Base Substitution A-G INTRON HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-361.SNP.3:18737301 chr03:018737301 0 W/18737301-18737301 FN-361 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g32700 retrotransposon protein, putative, unclassified, expressed SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3709-S.SNP.3:18753937 chr03:018753937 0 W/18753937-18753937 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.815697;DP=3337;DP4=1378,1867,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88207e-06;MQSB=0.745191;RPB=0.954669;SGB=53.6492;VDB=0.209572;EFF=INTRON(MODIFIER||||738|LOC_Os03g32749|protein_coding|CODING|LOC_Os03g32749.1|2|1) FN3783-S.SNP.3:18757909 chr03:018757909 0 W/18757909-18757909 FN3783-S SNP C -> T AC=1;AN=190;BQB=0.67687;DP=2887;DP4=1328,1443,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0117769;MQB=0.727663;MQSB=0.487859;RPB=0.92088;SGB=43.2083;VDB=0.431731;EFF=INTRON(MODIFIER||||476|LOC_Os03g32770|protein_coding|CODING|LOC_Os03g32770.1|1|1) FN3591-S.SNP.3:18758219 chr03:018758219 0 W/18758219-18758219 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.89931;DP=2693;DP4=1455,1168,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.00928333;MQB=0.96643;MQSB=0.0150873;RPB=0.927859;SGB=58.0655;VDB=0.720497;EFF=INTRON(MODIFIER||||476|LOC_Os03g32770|protein_coding|CODING|LOC_Os03g32770.1|1|1) FN-131.SNP.3:18761984 chr03:018761984 0 W/18761984-18761984 FN-131 Single Base Substitution G-A INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3850-S.SNP.3:18762138 chr03:018762138 0 W/18762138-18762138 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.94312;DP=2308;DP4=994,1191,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=1.35866e-05;MQSB=5.32958e-19;RPB=0.388144;SGB=30.704;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.3:18763386 chr03:018763386 0 W/18763386-18763386 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.983673;DP=5141;DP4=2501,2426,7,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.13149e-06;MQSB=0.995374;RPB=0.860758;SGB=8.64371;VDB=0.484207;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G5R|141|LOC_Os03g32780|protein_coding|CODING|LOC_Os03g32780.1|1|1) FN_814-7-1.SNP.3:18764096 chr03:018764096 0 W/18764096-18764096 FN_814-7-1 Single Base Substitution C-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN730-S.SNP.3:18764258 chr03:018764258 0 W/18764258-18764258 FN730-S Single Base Substitution A-T INTERGENIC HOMO SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN1204-S.SNP.3:18764499 chr03:018764499 0 W/18764499-18764499 FN1204-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2483.SNP.3:18765556 chr03:018765556 0 W/18765556-18765556 FN2483 SNP G -> A AC=1;AN=200;BQB=0.963566;DP=4278;DP4=1922,2174,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17157e-05;MQSB=0.919754;RPB=0.928297;SGB=13.8539;VDB=0.774145;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.3:18776042 chr03:018776042 0 W/18776042-18776042 FN2555-S SNP C -> T AC=1;AN=198;BQB=0.880812;DP=3822;DP4=2065,1557,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000112786;MQSB=0.658011;RPB=0.991364;SGB=29.3637;VDB=0.417004;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q129*|162|LOC_Os03g32810|protein_coding|CODING|LOC_Os03g32810.1|1|1) FN4179-S.SNP.3:18776116 chr03:018776116 0 W/18776116-18776116 FN4179-S SNP T -> A AC=2;AN=170;BQB=0.96929;DP=2595;DP4=1194,1305,16,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.8791e-16;MQSB=0.999997;RPB=0.678747;SGB=127.84;VDB=0.475567;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P153|162|LOC_Os03g32810|protein_coding|CODING|LOC_Os03g32810.1|1|1) FN239-S.SNP.3:18778335 chr03:018778335 0 W/18778335-18778335 FN239-S Single Base Substitution C-G INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN1060-S.SNP.3:18781559 chr03:018781559 0 W/18781559-18781559 FN1060-S Single Base Substitution A-G INTERGENIC HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2559-S.SNP.3:18782565 chr03:018782565 0 W/18782565-18782565 FN2559-S SNP G -> A AC=1;AN=198;BQB=0.759567;DP=3546;DP4=1756,1634,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00169205;MQB=1.66895e-05;MQSB=0.0732298;RPB=0.989897;SGB=8.58354;VDB=0.166412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.3:18783280 chr03:018783280 0 W/18783280-18783280 FN2689-S SNP A -> G AC=1;AN=200;BQB=0.250293;DP=4538;DP4=2181,1644,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09687e-05;MQSB=0.414589;RPB=0.11902;SGB=-103.511;VDB=0.0245023;EFF=INTERGENIC(MODIFIER||||||||||1) FN415-S.SNP.3:18783700 chr03:018783700 0 W/18783700-18783700 FN415-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN2140-S.SNP.3:18786272 chr03:018786272 0 W/18786272-18786272 FN2140-S SNP T -> C AC=1;AN=168;BQB=0.662575;DP=2914;DP4=1442,1305,20,117;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00480439;MQB=0;MQSB=0.00516496;RPB=1.72695e-07;SGB=-1723.44;VDB=6.55281e-18;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S66P|155|LOC_Os03g32840|protein_coding|CODING|LOC_Os03g32840.1|1|1) FN4231-S.SNP.3:18786442 chr03:018786442 0 W/18786442-18786442 FN4231-S SNP T -> C AC=1;AN=170;BQB=0.917232;DP=2467;DP4=1199,1199,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=3.42378e-12;MQSB=0.692848;RPB=0.358417;SGB=55.5339;VDB=0.415108;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A122|155|LOC_Os03g32840|protein_coding|CODING|LOC_Os03g32840.1|1|1) FN551-S.SNP.3:18787262 chr03:018787262 0 W/18787262-18787262 FN551-S Single Base Substitution G-C INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3039-S.SNP.3:18788271 chr03:018788271 0 W/18788271-18788271 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.956451;DP=2839;DP4=1394,1363,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25483e-09;MQSB=0.998935;RPB=0.284218;SGB=42.7914;VDB=0.273624;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.3:18790775 chr03:018790775 0 W/18790775-18790775 FN511-S Single Base Substitution C-A INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1133-S.SNP.3:18791695 chr03:018791695 0 W/18791695-18791695 FN1133-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g32850 retrotransposon protein, putative, unclassified, expressed SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN4229-S.SNP.3:18794408 chr03:018794408 0 W/18794408-18794408 FN4229-S SNP T -> G AC=1;AN=170;BQB=0.897673;DP=3042;DP4=1424,1469,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.41499e-14;MQSB=0.98472;RPB=0.329669;SGB=87.856;VDB=0.389889;EFF=INTRON(MODIFIER||||809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|6|1) FN4229-S.SNP.3:18794409 chr03:018794409 0 W/18794409-18794409 FN4229-S SNP T -> A AC=1;AN=170;BQB=0.999267;DP=3048;DP4=1394,1517,8,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.65771e-13;MQSB=0.997537;RPB=0.390973;SGB=87.856;VDB=0.449383;EFF=INTRON(MODIFIER||||809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|6|1) FN2337.SNP.3:18794581 chr03:018794581 0 W/18794581-18794581 FN2337 SNP G -> A AC=2;AN=192;BQB=0.569312;DP=4897;DP4=2086,2264,17,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.11144e-16;MQSB=0.256879;RPB=0.392563;SGB=103.938;VDB=0.763937;EFF=INTRON(MODIFIER||||809|LOC_Os03g32850|protein_coding|CODING|LOC_Os03g32850.1|6|1) FN499-S.SNP.3:18798440 chr03:018798440 0 W/18798440-18798440 FN499-S Single Base Substitution G-A INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2765-S.SNP.3:18803329 chr03:018803329 0 W/18803329-18803329 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.659653;DP=4130;DP4=1992,1874,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242131;MQB=3.75768e-15;MQSB=0.674855;RPB=0.406717;SGB=57.8907;VDB=0.0955929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V94F|397|LOC_Os03g32860|protein_coding|CODING|LOC_Os03g32860.1|2|1) FN2140-S.SNP.3:18808588 chr03:018808588 0 W/18808588-18808588 FN2140-S SNP G -> C AC=1;AN=168;BQB=0.758615;DP=3189;DP4=1465,1678,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.57707e-12;MQSB=0.743547;RPB=0.715291;SGB=17.068;VDB=0.749565;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.3:18808926 chr03:018808926 0 W/18808926-18808926 FN3418-S SNP T -> A AC=1;AN=184;BQB=0.999937;DP=3311;DP4=1828,1304,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000302024;MQB=0.0041741;MQSB=0.1593;RPB=0.981918;SGB=21.6609;VDB=0.45117;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.3:18815438 chr03:018815438 0 W/18815438-18815438 FN795-S Single Base Substitution C-A INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN3695-S.SNP.3:18816770 chr03:018816770 0 W/18816770-18816770 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.973282;DP=3160;DP4=1318,1736,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01339e-06;MQSB=0.997785;RPB=0.516921;SGB=25.439;VDB=0.887186;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A320|431|LOC_Os03g32900|protein_coding|CODING|LOC_Os03g32900.1|3|1) FN-409.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN-409 Single Base Substitution A-G INTERGENIC HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1337-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN1337-S Single Base Substitution A-G INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2584-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN2584-S SNP A -> G AC=2;AN=198;BQB=0.238449;DP=4065;DP4=1942,1842,33,38;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.39356e-40;MQSB=0.879592;RPB=0.85689;SGB=315.074;VDB=0.389314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN3594-S SNP A -> G AC=2;AN=188;BQB=0.949146;DP=2962;DP4=1411,1452,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.87874e-18;MQSB=0.910233;RPB=0.678548;SGB=110.393;VDB=0.240757;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN409-S Single Base Substitution A-G INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN493-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN493-S Single Base Substitution A-G INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN924-S.SNP.3:18817260 chr03:018817260 0 W/18817260-18817260 FN924-S Single Base Substitution A-G INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN598-S.SNP.3:18817533 chr03:018817533 0 W/18817533-18817533 FN598-S Single Base Substitution G-A INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3363-S.SNP.3:18818695 chr03:018818695 0 W/18818695-18818695 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.932862;DP=2223;DP4=827,1226,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000449843;MQB=7.02946e-08;MQSB=0.230724;RPB=0.88627;SGB=71.3514;VDB=0.629315;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN-410 Single Base Substitution C-G INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2596-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN2596-S SNP C -> G AC=2;AN=198;BQB=0.0188305;DP=2056;DP4=611,1156,5,10;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.000486381;MQB=0.0504351;MQSB=3.91522e-05;RPB=0.995427;SGB=24.1541;VDB=0.769752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN3578-S SNP C -> G AC=2;AN=188;BQB=0.997062;DP=2659;DP4=1336,1162,12,20;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=6.34716e-12;MQSB=0.100132;RPB=0.846201;SGB=139.845;VDB=0.360146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN3600-S SNP C -> G AC=1;AN=190;BQB=0.998587;DP=1057;DP4=433,511,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.0765387;MQSB=0.997611;RPB=0.547688;SGB=26.3271;VDB=0.974215;EFF=INTERGENIC(MODIFIER||||||||||1) FN410-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN410-S Single Base Substitution C-G INTERGENIC HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN439-S Single Base Substitution C-G INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN623-S.SNP.3:18818890 chr03:018818890 0 W/18818890-18818890 FN623-S Single Base Substitution C-G INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN351-S.SNP.3:18819865 chr03:018819865 0 W/18819865-18819865 FN351-S Single Base Substitution T-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.3:18819866 chr03:018819866 0 W/18819866-18819866 FN351-S Single Base Substitution G-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1170-S.SNP.3:18823336 chr03:018823336 0 W/18823336-18823336 FN1170-S Single Base Substitution G-T STOP_GAINED HET LOC_Os03g32910 retrotransposon protein, putative, unclassified SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1402-S.SNP.3:18824819 chr03:018824819 0 W/18824819-18824819 FN1402-S Single Base Substitution G-A INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2288.SNP.3:18827254 chr03:018827254 0 W/18827254-18827254 FN2288 SNP G -> A AC=1;AN=192;BQB=0.137011;DP=4451;DP4=2033,2121,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00337003;MQB=1.34335e-05;MQSB=0.228522;RPB=0.780655;SGB=8.91915;VDB=0.940258;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A670|712|LOC_Os03g32930|protein_coding|CODING|LOC_Os03g32930.1|6|1) FN2195-S.SNP.3:18833943 chr03:018833943 0 W/18833943-18833943 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.718313;DP=5362;DP4=2595,2345,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000186498;MQB=1.64449e-08;MQSB=0.884471;RPB=0.995898;SGB=58.2031;VDB=0.470506;EFF=INTRON(MODIFIER||||586|LOC_Os03g32940|protein_coding|CODING|LOC_Os03g32940.1|3|1) FN3312-S.SNP.3:18837799 chr03:018837799 0 W/18837799-18837799 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.748638;DP=2631;DP4=1242,1287,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.462562;MQB=0.66168;MQSB=0;RPB=0.62775;SGB=56.8786;VDB=0.0471807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.3:18840292 chr03:018840292 0 W/18840292-18840292 FN3843-S SNP T -> G AC=1;AN=190;BQB=0.990662;DP=2364;DP4=1640,629,11,2;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.035956;MQB=0.987116;MQSB=1.28616e-24;RPB=0.576579;SGB=36.1006;VDB=0.761291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.3:18844208 chr03:018844208 0 W/18844208-18844208 FN1427-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g32960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1711-S.SNP.3:18850269 chr03:018850269 0 W/18850269-18850269 FN1711-S SNP G -> A AC=2;AN=188;BQB=0.693483;DP=2414;DP4=1252,1123,10,17;HOB=0.0210502;ICB=0.494738;MQ=32;MQ0F=0.110605;MQB=0.484737;MQSB=1.66071e-17;RPB=0.485144;SGB=-9.02352;VDB=0.393261;EFF=INTRON(MODIFIER||||401|LOC_Os03g32970|protein_coding|CODING|LOC_Os03g32970.1|1|1) FN2660-S.SNP.3:18854188 chr03:018854188 0 W/18854188-18854188 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.980816;DP=4613;DP4=2201,2230,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.4141e-10;MQSB=0.992844;RPB=0.803701;SGB=47.4799;VDB=0.886326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.3:18856173 chr03:018856173 0 W/18856173-18856173 FN3386-S SNP T -> A AC=1;AN=184;BQB=0.510097;DP=4530;DP4=2242,1982,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35733e-05;MQSB=0.852475;RPB=0.557923;SGB=-15.7576;VDB=0.763906;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A78|173|LOC_Os03g32980|protein_coding|CODING|LOC_Os03g32980.1|1|1) FN1721-S.SNP.3:18857639 chr03:018857639 0 W/18857639-18857639 FN1721-S SNP G -> C AC=1;AN=188;BQB=0.365291;DP=2353;DP4=894,1426,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.0832979;MQB=0.994283;MQSB=0.984668;RPB=0.98935;SGB=-36.4511;VDB=0.442373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.3:18863352 chr03:018863352 0 W/18863352-18863352 FN1058-S Single Base Substitution C-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN879-S.SNP.3:18866331 chr03:018866331 0 W/18866331-18866331 FN879-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g33000 retrotransposon, putative, centromere-specific SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3480-S.SNP.3:18871652 chr03:018871652 0 W/18871652-18871652 FN3480-S SNP T -> C AC=2;AN=184;BQB=0.863866;DP=2993;DP4=1560,1332,19,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.39948e-16;MQSB=0.980547;RPB=0.656301;SGB=130.135;VDB=0.150845;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.3:18877536 chr03:018877536 0 W/18877536-18877536 FN1409-S Single Base Substitution C-T INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN_N1-151-7.SNP.3:18878220 chr03:018878220 0 W/18878220-18878220 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN783-S.SNP.3:18885401 chr03:018885401 0 W/18885401-18885401 FN783-S Single Base Substitution T-A INTRON HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN3957-S.SNP.3:18893117 chr03:018893117 0 W/18893117-18893117 FN3957-S SNP T -> G AC=1;AN=168;BQB=0.528953;DP=2580;DP4=1200,1234,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.81223e-10;MQSB=0.999983;RPB=0.948132;SGB=24.6155;VDB=0.375586;EFF=UTR_3_PRIME(MODIFIER||136||477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|4|1) FN3957-S.SNP.3:18893123 chr03:018893123 0 W/18893123-18893123 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.852662;DP=2553;DP4=1214,1243,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.13646e-09;MQSB=0.998415;RPB=0.796086;SGB=52.1728;VDB=0.440139;EFF=UTR_3_PRIME(MODIFIER||142||477|LOC_Os03g33012|protein_coding|CODING|LOC_Os03g33012.1|4|1) FN4185-S.SNP.3:18894918 chr03:018894918 0 W/18894918-18894918 FN4185-S SNP A -> G AC=2;AN=170;BQB=0.821837;DP=2775;DP4=1344,1325,10,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.11979e-15;MQSB=0.88897;RPB=0.70937;SGB=76.1898;VDB=0.882571;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F156|545|LOC_Os03g33030|protein_coding|CODING|LOC_Os03g33030.1|1|1) FN501-S.SNP.3:18896686 chr03:018896686 0 W/18896686-18896686 FN501-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g33040 retrotransposon protein, putative, unclassified SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1029-S.SNP.3:18899016 chr03:018899016 0 W/18899016-18899016 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3417-S.SNP.3:18902132 chr03:018902132 0 W/18902132-18902132 FN3417-S SNP G -> A AC=2;AN=184;BQB=0.73314;DP=3812;DP4=1945,1762,21,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.10642e-18;MQSB=0.991694;RPB=0.402987;SGB=127.314;VDB=0.898397;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G25S|209|LOC_Os03g33044|protein_coding|CODING|LOC_Os03g33044.1|1|1) FN2284.SNP.3:18903681 chr03:018903681 0 W/18903681-18903681 FN2284 SNP C -> T AC=1;AN=192;BQB=0.84245;DP=4681;DP4=2339,2099,20,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00683615;MQB=1.89408e-12;MQSB=0.000934114;RPB=0.827936;SGB=59.6861;VDB=0.458968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.3:18904060 chr03:018904060 0 W/18904060-18904060 FN-371 Single Base Substitution G-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3429-S.SNP.3:18906929 chr03:018906929 0 W/18906929-18906929 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.995826;DP=3683;DP4=1848,1626,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0124898;MQB=0.00116694;MQSB=1.10024e-06;RPB=0.99511;SGB=39.699;VDB=0.97674;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.3:18923837 chr03:018923837 0 W/18923837-18923837 FN-305 Single Base Substitution C-G INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1414-S.SNP.3:18924031 chr03:018924031 0 W/18924031-18924031 FN1414-S Single Base Substitution G-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3287-S.SNP.3:18925828 chr03:018925828 0 W/18925828-18925828 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.998981;DP=2937;DP4=1323,1530,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.002e-07;MQSB=0.428387;RPB=0.446054;SGB=57.786;VDB=0.502073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R33K|59|LOC_Os03g33074|protein_coding|CODING|LOC_Os03g33074.1|1|1) FN3491-S.SNP.3:18930857 chr03:018930857 0 W/18930857-18930857 FN3491-S SNP C -> A AC=1;AN=188;BQB=0.982236;DP=2437;DP4=1052,1324,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.48922e-05;MQSB=0.997567;RPB=0.696231;SGB=18.2682;VDB=0.914072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.3:18932833 chr03:018932833 0 W/18932833-18932833 FN1299-S Single Base Substitution A-G INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2546-S.SNP.3:18939543 chr03:018939543 0 W/18939543-18939543 FN2546-S SNP T -> C AC=2;AN=198;BQB=0.759809;DP=4348;DP4=2293,1872,12,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.22651e-16;MQSB=0.968564;RPB=0.972812;SGB=90.4807;VDB=0.75964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q776R|1370|LOC_Os03g33100|protein_coding|CODING|LOC_Os03g33100.1|8|1) FN772-S.SNP.3:18948607 chr03:018948607 0 W/18948607-18948607 FN772-S Single Base Substitution G-A INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN772-S.SNP.3:18948608 chr03:018948608 0 W/18948608-18948608 FN772-S Single Base Substitution G-A INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2203-S.SNP.3:18958000 chr03:018958000 0 W/18958000-18958000 FN2203-S SNP C -> A AC=1;AN=190;BQB=0.251694;DP=5731;DP4=2755,2644,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0626418;MQB=0.943948;MQSB=1.06565e-21;RPB=0.897237;SGB=21.1058;VDB=0.486279;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S146*|1169|LOC_Os03g33140|protein_coding|CODING|LOC_Os03g33140.1|1|1);LOF=(LOC_Os03g33140|LOC_Os03g33140|1|1.00);NMD=(LOC_Os03g33140|LOC_Os03g33140|1|1.00) FN-257.SNP.3:18966160 chr03:018966160 0 W/18966160-18966160 FN-257 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g33160 retrotransposon protein, putative, unclassified SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN-207.SNP.3:18990389 chr03:018990389 0 W/18990389-18990389 FN-207 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g33200 expressed protein SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN4221-S.SNP.3:18990515 chr03:018990515 0 W/18990515-18990515 FN4221-S SNP G -> A AC=1;AN=170;BQB=0.871453;DP=2459;DP4=1378,1024,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.26173e-06;MQSB=0.955553;RPB=0.528255;SGB=21.1076;VDB=0.650146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R126C|236|LOC_Os03g33200|protein_coding|CODING|LOC_Os03g33200.1|1|1) FN3565-S.SNP.3:18991455 chr03:018991455 0 W/18991455-18991455 FN3565-S SNP T -> A AC=1;AN=188;BQB=0.952391;DP=2824;DP4=1271,1471,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.00162e-10;MQSB=0.996008;RPB=0.63601;SGB=67.1521;VDB=0.255643;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-3-1.SNP.3:18992468 chr03:018992468 0 W/18992468-18992468 FN_789-3-1 Single Base Substitution C-A INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1154-S.SNP.3:18992859 chr03:018992859 0 W/18992859-18992859 FN1154-S Single Base Substitution T-G INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN492-S.SNP.3:18993015 chr03:018993015 0 W/18993015-18993015 FN492-S Single Base Substitution C-A INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3697-S.SNP.3:18994346 chr03:018994346 0 W/18994346-18994346 FN3697-S SNP G -> A AC=1;AN=190;BQB=0.243938;DP=2951;DP4=1417,1431,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000404715;MQSB=0.893431;RPB=0.992243;SGB=28.9929;VDB=0.213347;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T67|736|LOC_Os03g33220|protein_coding|CODING|LOC_Os03g33220.1|1|1) CW-631-3-1.SNP.3:18995145 chr03:018995145 0 W/18995145-18995145 CW-631-3-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2531-S.SNP.3:19005267 chr03:019005267 0 W/19005267-19005267 FN2531-S SNP C -> G AC=1;AN=198;BQB=0.916072;DP=3936;DP4=1698,1982,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.3756e-13;MQSB=0.840839;RPB=0.423165;SGB=18.9201;VDB=0.107439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.3:19010029 chr03:019010029 0 W/19010029-19010029 FN3670-S SNP G -> A AC=1;AN=190;BQB=0.926084;DP=2551;DP4=1302,1173,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.31502e-05;MQSB=0.713812;RPB=0.999152;SGB=26.3271;VDB=0.75529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.3:19011660 chr03:019011660 0 W/19011660-19011660 FN1522-S Single Base Substitution A-C INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN4314-S.SNP.3:19014167 chr03:019014167 0 W/19014167-19014167 FN4314-S SNP A -> G AC=1;AN=170;BQB=0.991036;DP=2618;DP4=1118,1420,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.35062e-13;MQSB=0.99334;RPB=0.997636;SGB=62.4192;VDB=0.381647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.3:19020070 chr03:019020070 0 W/19020070-19020070 FN2765-S SNP C -> T AC=2;AN=198;BQB=0.810786;DP=3866;DP4=1904,1704,24,19;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=6.41078e-11;MQSB=0.736161;RPB=0.733826;SGB=144.408;VDB=0.857914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P754L|777|LOC_Os03g33240|protein_coding|CODING|LOC_Os03g33240.1|3|1) FN266-S.SNP.3:19021733 chr03:019021733 0 W/19021733-19021733 FN266-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g33250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1547-S.SNP.3:19022829 chr03:019022829 0 W/19022829-19022829 FN1547-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g33250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN-252.SNP.3:19025277 chr03:019025277 0 W/19025277-19025277 FN-252 Single Base Substitution G-A INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2794-S.SNP.3:19026047 chr03:019026047 0 W/19026047-19026047 FN2794-S SNP T -> C AC=1;AN=198;BQB=0.845997;DP=3253;DP4=1681,1226,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.00416577;MQSB=0.0141119;RPB=0.126617;SGB=35.7638;VDB=0.668074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.3:19033161 chr03:019033161 0 W/19033161-19033161 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.767917;DP=4934;DP4=2365,2375,12,10;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0103364;MQB=0.106976;MQSB=0.571;RPB=0.902;SGB=95.7111;VDB=0.568703;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P16|78|LOC_Os03g33270|protein_coding|CODING|LOC_Os03g33270.1|1|1) FN938-S.SNP.3:19037267 chr03:019037267 0 W/19037267-19037267 FN938-S Single Base Substitution C-G INTRON HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2423.SNP.3:19042797 chr03:019042797 0 W/19042797-19042797 FN2423 SNP C -> T AC=2;AN=200;BQB=0.126038;DP=4148;DP4=2073,1839,21,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.16565e-23;MQSB=0.999999;RPB=0.981536;SGB=99.8245;VDB=0.800937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E19K|651|LOC_Os03g33290|protein_coding|CODING|LOC_Os03g33290.1|1|1) FN-124.SNP.3:19046591 chr03:019046591 0 W/19046591-19046591 FN-124 Single Base Substitution G-T INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2673-S.SNP.3:19046902 chr03:019046902 0 W/19046902-19046902 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.139284;DP=4527;DP4=2078,2239,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24814e-11;MQSB=0.992859;RPB=0.269078;SGB=69.1109;VDB=0.809795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V465I|1187|LOC_Os03g33300|protein_coding|CODING|LOC_Os03g33300.1|5|1) FN812-S.SNP.3:19047920 chr03:019047920 0 W/19047920-19047920 FN812-S Single Base Substitution A-G INTRON HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3448-S.SNP.3:19052135 chr03:019052135 0 W/19052135-19052135 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.0888076;DP=2564;DP4=1416,1084,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0688987;MQSB=0.996359;RPB=0.907789;SGB=30.6558;VDB=0.674881;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.3:19053631 chr03:019053631 0 W/19053631-19053631 FN-294 Single Base Substitution A-T INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN2351.SNP.3:19055283 chr03:019055283 0 W/19055283-19055283 FN2351 SNP A -> T AC=2;AN=192;BQB=0.363076;DP=4874;DP4=2414,2195,23,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000410341;MQB=1.38154e-16;MQSB=0.975395;RPB=0.602777;SGB=43.3348;VDB=0.977353;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.3:19055283 chr03:019055283 0 W/19055283-19055283 FN810-S Single Base Substitution A-T INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1348-S.SNP.3:19055346 chr03:019055346 0 W/19055346-19055346 FN1348-S Single Base Substitution G-A INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2302.SNP.3:19055486 chr03:019055486 0 W/19055486-19055486 FN2302 SNP G -> A AC=1;AN=192;BQB=0.352285;DP=4676;DP4=2253,2147,17,17;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0124038;MQB=0.581478;MQSB=0.00701439;RPB=0.309725;SGB=72.5078;VDB=0.531614;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.3:19056000 chr03:019056000 0 W/19056000-19056000 FN804-S Single Base Substitution C-G INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1117-S.SNP.3:19056290 chr03:019056290 0 W/19056290-19056290 FN1117-S Single Base Substitution G-A INTERGENIC HOMO SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3661-S.SNP.3:19059948 chr03:019059948 0 W/19059948-19059948 FN3661-S SNP T -> A AC=1;AN=190;BQB=0.999511;DP=2045;DP4=1071,863,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.01605e-05;MQSB=0.847281;RPB=0.963722;SGB=35.4339;VDB=0.554245;EFF=INTRON(MODIFIER||||1031|LOC_Os03g33328|protein_coding|CODING|LOC_Os03g33328.1|1|1) FN3828-S.SNP.3:19064151 chr03:019064151 0 W/19064151-19064151 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.985246;DP=3113;DP4=1340,1656,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0263411;MQB=0.664009;MQSB=0.967118;RPB=0.254939;SGB=71.6393;VDB=0.158792;EFF=INTRON(MODIFIER||||1031|LOC_Os03g33328|protein_coding|CODING|LOC_Os03g33328.1|3|1) FN4065-S.SNP.3:19065652 chr03:019065652 0 W/19065652-19065652 FN4065-S SNP A -> C AC=1;AN=168;BQB=0.99406;DP=2931;DP4=1389,1423,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.1379e-08;MQSB=0.715462;RPB=0.635806;SGB=24.6155;VDB=0.281015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.3:19071257 chr03:019071257 0 W/19071257-19071257 FN2349 SNP A -> T AC=1;AN=192;BQB=0.0776567;DP=5223;DP4=2639,2328,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0700747;MQB=0.985646;MQSB=0;RPB=0.929117;SGB=22.9983;VDB=0.555229;EFF=INTRON(MODIFIER||||588|LOC_Os03g33340|protein_coding|CODING|LOC_Os03g33340.1|2|1) FN1345-S.SNP.3:19075191 chr03:019075191 0 W/19075191-19075191 FN1345-S Single Base Substitution C-A INTRON HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1345-S.SNP.3:19075192 chr03:019075192 0 W/19075192-19075192 FN1345-S Single Base Substitution T-A INTRON HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2730-S.SNP.3:19076269 chr03:019076269 0 W/19076269-19076269 FN2730-S SNP G -> A AC=2;AN=200;BQB=0.640792;DP=5228;DP4=2387,2616,11,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.08321e-14;MQSB=0.951093;RPB=0.982601;SGB=22.3313;VDB=0.387982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G147S|442|LOC_Os03g33360|protein_coding|CODING|LOC_Os03g33360.1|3|1) FN1464-S.SNP.3:19076859 chr03:019076859 0 W/19076859-19076859 FN1464-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3438-S.SNP.3:19079733 chr03:019079733 0 W/19079733-19079733 FN3438-S SNP C -> T AC=2;AN=184;BQB=0.961058;DP=2684;DP4=1303,1273,22,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.57935e-22;MQSB=0.549327;RPB=0.584335;SGB=192.478;VDB=0.791296;EFF=INTRON(MODIFIER||||415|LOC_Os03g33370|protein_coding|CODING|LOC_Os03g33370.1|1|1) FN3411-S.SNP.3:19081142 chr03:019081142 0 W/19081142-19081142 FN3411-S SNP T -> A AC=1;AN=184;BQB=0.923607;DP=2536;DP4=1212,1246,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11429e-07;MQSB=0.949574;RPB=0.709992;SGB=44.2207;VDB=0.602366;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.3:19081260 chr03:019081260 0 W/19081260-19081260 FN1538-S Single Base Substitution T-C INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2673-S.SNP.3:19085781 chr03:019085781 0 W/19085781-19085781 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.906046;DP=5144;DP4=2493,2445,11,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.16939e-09;MQSB=0.0208427;RPB=0.215581;SGB=47.7211;VDB=0.271791;EFF=INTRON(MODIFIER||||300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|1|1) FN2596-S.SNP.3:19086029 chr03:019086029 0 W/19086029-19086029 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.284507;DP=4211;DP4=1848,2157,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.57646e-05;MQSB=0.984379;RPB=0.903085;SGB=1.37381;VDB=0.983228;EFF=INTRON(MODIFIER||||300|LOC_Os03g33380|protein_coding|CODING|LOC_Os03g33380.1|1|1) FN783-S.SNP.3:19090294 chr03:019090294 0 W/19090294-19090294 FN783-S Single Base Substitution C-T INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2398.SNP.3:19090591 chr03:019090591 0 W/19090591-19090591 FN2398 SNP T -> G AC=1;AN=200;BQB=0.588025;DP=4959;DP4=2316,2346,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88833e-08;MQSB=0.980186;RPB=0.505556;SGB=77.2904;VDB=0.521408;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.3:19091242 chr03:019091242 0 W/19091242-19091242 FN-268 Single Base Substitution A-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3627-S.SNP.3:19096325 chr03:019096325 0 W/19096325-19096325 FN3627-S SNP T -> C AC=1;AN=190;BQB=0.0811706;DP=3127;DP4=1621,1409,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01302e-05;MQSB=0.987753;RPB=0.819318;SGB=15.9981;VDB=0.977732;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:19097787 chr03:019097787 0 W/19097787-19097787 FN438-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN769-S.SNP.3:19097989 chr03:019097989 0 W/19097989-19097989 FN769-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g33400 expressed protein SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN783-S.SNP.3:19098914 chr03:019098914 0 W/19098914-19098914 FN783-S Single Base Substitution C-T INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN-71.SNP.3:19099719 chr03:019099719 0 W/19099719-19099719 FN-71 Single Base Substitution C-T INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3838-S.SNP.3:19100921 chr03:019100921 0 W/19100921-19100921 FN3838-S SNP A -> G AC=1;AN=190;BQB=0.990863;DP=2781;DP4=1441,1266,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0266091;MQB=0.990535;MQSB=0.00215306;RPB=0.999606;SGB=25.439;VDB=0.940371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I153V|326|LOC_Os03g33420|protein_coding|CODING|LOC_Os03g33420.1|3|1) FN2540-S.SNP.3:19102785 chr03:019102785 0 W/19102785-19102785 FN2540-S SNP G -> T AC=2;AN=198;BQB=0.0214289;DP=3711;DP4=1908,1573,16,13;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.0118566;MQB=7.74028e-05;MQSB=6.81994e-07;RPB=0.701485;SGB=60.4858;VDB=0.812121;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.3:19103486 chr03:019103486 0 W/19103486-19103486 FN801-S Single Base Substitution T-G INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN3723-S.SNP.3:19104982 chr03:019104982 0 W/19104982-19104982 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.956235;DP=2598;DP4=1237,1284,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21554e-06;MQSB=0.969252;RPB=0.603339;SGB=39.9877;VDB=0.73483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S189F|190|LOC_Os03g33430|protein_coding|CODING|LOC_Os03g33430.1|1|1) FN1372-S.SNP.3:19106930 chr03:019106930 0 W/19106930-19106930 FN1372-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN629-S.SNP.3:19110747 chr03:019110747 0 W/19110747-19110747 FN629-S Single Base Substitution T-A INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3792-S.SNP.3:19112117 chr03:019112117 0 W/19112117-19112117 FN3792-S SNP G -> T AC=1;AN=190;BQB=0.673198;DP=2963;DP4=1504,1287,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13498e-11;MQSB=0.86393;RPB=0.981207;SGB=36.4291;VDB=0.94648;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.3:19114031 chr03:019114031 0 W/19114031-19114031 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.690314;DP=2720;DP4=1393,1225,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.99238e-08;MQSB=0.986074;RPB=0.730276;SGB=30.8405;VDB=0.818354;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.3:19114307 chr03:019114307 0 W/19114307-19114307 FN2489 SNP C -> A AC=1;AN=200;BQB=0.261151;DP=3785;DP4=1906,1644,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000264201;MQB=2.39141e-05;MQSB=0.659908;RPB=0.930937;SGB=49.6594;VDB=0.738266;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E439*|487|LOC_Os03g33460|protein_coding|CODING|LOC_Os03g33460.1|8|1) FN-120.SNP.3:19117600 chr03:019117600 0 W/19117600-19117600 FN-120 Single Base Substitution T-C INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1514-S.SNP.3:19117932 chr03:019117932 0 W/19117932-19117932 FN1514-S Single Base Substitution G-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4175-S.SNP.3:19118237 chr03:019118237 0 W/19118237-19118237 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.994847;DP=2379;DP4=1106,1206,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.29558e-11;MQSB=0.974808;RPB=0.938672;SGB=55.5339;VDB=0.649763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.3:19118999 chr03:019118999 0 W/19118999-19118999 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.00118042;DP=2708;DP4=1399,1234,17,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000369276;MQB=7.68671e-06;MQSB=1.40592e-22;RPB=0.830187;SGB=-98.0622;VDB=0.590239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.3:19125647 chr03:019125647 0 W/19125647-19125647 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.927264;DP=4702;DP4=2142,2225,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000212675;MQB=3.95491e-12;MQSB=0.886008;RPB=0.528533;SGB=-64.6575;VDB=0.747538;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.3:19126032 chr03:019126032 0 W/19126032-19126032 FN838-S Single Base Substitution G-A INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2283.SNP.3:19127897 chr03:019127897 0 W/19127897-19127897 FN2283 SNP C -> A AC=1;AN=192;BQB=0.505057;DP=4486;DP4=2151,2096,17,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.78749e-12;MQSB=0.998742;RPB=0.137604;SGB=68.2948;VDB=0.167077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T169N|268|LOC_Os03g33480|protein_coding|CODING|LOC_Os03g33480.1|2|1) FN1154-S.SNP.3:19128206 chr03:019128206 0 W/19128206-19128206 FN1154-S Single Base Substitution A-C INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN462-S.SNP.3:19142828 chr03:019142828 0 W/19142828-19142828 FN462-S Single Base Substitution G-T INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2674-S.SNP.3:19144003 chr03:019144003 0 W/19144003-19144003 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.560753;DP=4603;DP4=2293,1990,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.27232e-13;MQSB=0.893015;RPB=0.86531;SGB=61.9006;VDB=0.0458683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.3:19144992 chr03:019144992 0 W/19144992-19144992 FN3528-S SNP T -> G AC=1;AN=188;BQB=0.810625;DP=2877;DP4=1587,1138,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.22513e-09;MQSB=0.288094;RPB=0.963608;SGB=43.0708;VDB=0.926108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.3:19147630 chr03:019147630 0 W/19147630-19147630 FN1286-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3593-S.SNP.3:19149394 chr03:019149394 0 W/19149394-19149394 FN3593-S SNP G -> A AC=1;AN=190;BQB=0.428454;DP=2311;DP4=1432,769,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64561e-05;MQSB=0.974932;RPB=0.969541;SGB=25.439;VDB=0.906563;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.3:19163403 chr03:019163403 0 W/19163403-19163403 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.985566;DP=3713;DP4=1727,1802,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00161594;MQB=2.32551e-07;MQSB=0.0217154;RPB=0.897868;SGB=90.4807;VDB=0.881613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.3:19163648 chr03:019163648 0 W/19163648-19163648 FN2321 SNP G -> T AC=1;AN=192;BQB=0.241175;DP=4434;DP4=2042,2010,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.31751e-07;MQSB=0.212033;RPB=0.906311;SGB=78.9878;VDB=0.604396;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.3:19173722 chr03:019173722 0 W/19173722-19173722 W276-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN4025-S.SNP.3:19193661 chr03:019193661 0 W/19193661-19193661 FN4025-S SNP G -> A AC=2;AN=168;BQB=0.351961;DP=3066;DP4=1591,1315,18,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.76866e-15;MQSB=0.998697;RPB=0.260318;SGB=58.647;VDB=0.893482;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:19201822 chr03:019201822 0 W/19201822-19201822 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.787008;DP=4316;DP4=2132,1938,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.16847e-07;MQSB=0.998839;RPB=0.467015;SGB=18.9639;VDB=0.114294;EFF=INTRON(MODIFIER||||448|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.1|3|1),INTRON(MODIFIER||||440|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.2|3|1) FN3914-S.SNP.3:19201946 chr03:019201946 0 W/19201946-19201946 FN3914-S SNP G -> T AC=2;AN=158;BQB=0.109758;DP=2208;DP4=1066,1066,15,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.89302e-11;MQSB=0.992413;RPB=0.6691;SGB=87.9846;VDB=0.762578;EFF=INTRON(MODIFIER||||448|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.1|3|1),INTRON(MODIFIER||||440|LOC_Os03g33590|protein_coding|CODING|LOC_Os03g33590.2|3|1) FN1314-S.SNP.3:19206151 chr03:019206151 0 W/19206151-19206151 FN1314-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN2456.SNP.3:19208480 chr03:019208480 0 W/19208480-19208480 FN2456 SNP G -> A AC=1;AN=200;BQB=0.993503;DP=4816;DP4=2189,2432,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.41408e-08;MQSB=0.961869;RPB=0.0903041;SGB=54.2646;VDB=0.24143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.3:19214763 chr03:019214763 0 W/19214763-19214763 FN3332-S SNP G -> T AC=2;AN=184;BQB=0.749831;DP=2931;DP4=1427,1377,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.37221e-14;MQSB=0.989668;RPB=0.868524;SGB=112.047;VDB=0.0482251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.3:19220895 chr03:019220895 0 W/19220895-19220895 FN3998-S SNP A -> G AC=2;AN=168;BQB=0.91521;DP=2840;DP4=1545,1161,9,9;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00211268;MQB=0.00273495;MQSB=0.00279175;RPB=0.857376;SGB=74.3269;VDB=0.431093;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.3:19226851 chr03:019226851 0 W/19226851-19226851 FN875-S Single Base Substitution C-T INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN4241-S.SNP.3:19227193 chr03:019227193 0 W/19227193-19227193 FN4241-S SNP G -> A AC=2;AN=170;BQB=0.894289;DP=2774;DP4=1386,1222,33,22;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.00108147;MQB=3.54958e-28;MQSB=0.717488;RPB=0.399724;SGB=169.627;VDB=0.228296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.3:19231519 chr03:019231519 0 W/19231519-19231519 FN-153 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g33640 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN684-S.SNP.3:19236403 chr03:019236403 0 W/19236403-19236403 FN684-S Single Base Substitution C-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN919-S.SNP.3:19239660 chr03:019239660 0 W/19239660-19239660 FN919-S Single Base Substitution T-C INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3472-S.SNP.3:19241144 chr03:019241144 0 W/19241144-19241144 FN3472-S SNP G -> A AC=1;AN=184;BQB=0.943173;DP=2044;DP4=985,1003,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.01599e-06;MQSB=0.539529;RPB=0.350535;SGB=39.699;VDB=0.741871;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.3:19244369 chr03:019244369 0 W/19244369-19244369 FN547-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g33650 AGO7, putative, expressed SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3946-S.SNP.3:19248759 chr03:019248759 0 W/19248759-19248759 FN3946-S SNP A -> G AC=1;AN=168;BQB=0.999533;DP=2758;DP4=1152,1355,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.8953e-05;MQSB=0.978861;RPB=0.982397;SGB=21.0249;VDB=0.762155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.3:19251318 chr03:019251318 0 W/19251318-19251318 FN3714-S SNP A -> C AC=1;AN=190;BQB=0.249922;DP=3474;DP4=1682,1543,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000287853;MQB=1.11021e-10;MQSB=0.860028;RPB=0.332035;SGB=-8.23709;VDB=0.90671;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.3:19262702 chr03:019262702 0 W/19262702-19262702 FN737-S Single Base Substitution C-T INTRON HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN4260-S.SNP.3:19263201 chr03:019263201 0 W/19263201-19263201 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.684171;DP=3113;DP4=1448,1578,7,19;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.151943;MQB=0.000859995;MQSB=7.14662e-44;RPB=0.00391739;SGB=-194.298;VDB=0.00259482;EFF=INTRON(MODIFIER||||1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|2|1) FN3394-S.SNP.3:19265016 chr03:019265016 0 W/19265016-19265016 FN3394-S SNP C -> A AC=1;AN=184;BQB=0.949607;DP=2771;DP4=1357,1351,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.89357e-08;MQSB=0.964794;RPB=0.957447;SGB=62.3078;VDB=0.966697;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q549K|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|5|1) FN3727-S.SNP.3:19266507 chr03:019266507 0 W/19266507-19266507 FN3727-S SNP G -> C AC=1;AN=190;BQB=0.947548;DP=2810;DP4=1351,1370,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000606121;MQSB=0.404187;RPB=0.0771015;SGB=30.8803;VDB=0.229708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R1007S|1149|LOC_Os03g33680|protein_coding|CODING|LOC_Os03g33680.1|6|1) FN2232-S.SNP.3:19267633 chr03:019267633 0 W/19267633-19267633 FN2232-S SNP G -> A AC=2;AN=190;BQB=0.993915;DP=4688;DP4=2192,2071,24,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00127986;MQB=3.7071e-18;MQSB=0.952227;RPB=0.981963;SGB=124.947;VDB=0.293411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.3:19270274 chr03:019270274 0 W/19270274-19270274 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.999967;DP=3810;DP4=2272,1420,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45339e-10;MQSB=0.96843;RPB=0.916578;SGB=25.7969;VDB=0.776679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R469H|749|LOC_Os03g33690|protein_coding|CODING|LOC_Os03g33690.1|4|1) FN1559-S.SNP.3:19272508 chr03:019272508 0 W/19272508-19272508 FN1559-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g33700 retrotransposon protein, putative, unclassified, expressed SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2791-S.SNP.3:19274740 chr03:019274740 0 W/19274740-19274740 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.511701;DP=4027;DP4=1978,1845,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.16006e-13;MQSB=0.655386;RPB=0.99926;SGB=86.8856;VDB=0.62074;EFF=INTERGENIC(MODIFIER||||||||||1) FN-16.SNP.3:19275078 chr03:019275078 0 W/19275078-19275078 FN-16 Single Base Substitution T-C INTERGENIC Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN861-S.SNP.3:19275833 chr03:019275833 0 W/19275833-19275833 FN861-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN1583-S.SNP.3:19279414 chr03:019279414 0 W/19279414-19279414 FN1583-S Single Base Substitution T-C INTRON HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3691-S.SNP.3:19284511 chr03:019284511 0 W/19284511-19284511 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.965409;DP=2538;DP4=1225,1233,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000242733;MQSB=0.7227;RPB=0.984011;SGB=30.8803;VDB=0.978746;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.3:19287231 chr03:019287231 0 W/19287231-19287231 FN978-S Single Base Substitution G-A INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4017-S.SNP.3:19288494 chr03:019288494 0 W/19288494-19288494 FN4017-S SNP A -> C AC=1;AN=168;BQB=0.917225;DP=2695;DP4=1239,1338,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06001e-06;MQSB=0.982509;RPB=0.00274233;SGB=24.4556;VDB=0.0223239;EFF=INTRON(MODIFIER||||726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|2|1) FN3711-S.SNP.3:19288637 chr03:019288637 0 W/19288637-19288637 FN3711-S SNP T -> C AC=1;AN=188;BQB=0.84856;DP=3081;DP4=1395,1586,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.49491e-10;MQSB=0.987861;RPB=0.506656;SGB=50.3161;VDB=0.846662;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H289|726|LOC_Os03g33740|protein_coding|CODING|LOC_Os03g33740.1|3|1) FN4071-S.SNP.3:19297093 chr03:019297093 0 W/19297093-19297093 FN4071-S SNP G -> C AC=1;AN=182;BQB=0.545255;DP=3006;DP4=1567,1385,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.75956e-07;MQSB=0.908818;RPB=0.737294;SGB=18.1224;VDB=0.601396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.3:19300587 chr03:019300587 0 W/19300587-19300587 FN2146-S SNP G -> A AC=2;AN=168;BQB=0.503561;DP=2291;DP4=965,1259,14,19;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.0048014;MQB=2.5463e-05;MQSB=1.39137e-05;RPB=0.355039;SGB=103.364;VDB=0.757462;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A544|1535|LOC_Os03g33760|protein_coding|CODING|LOC_Os03g33760.1|2|1) FN3909-S.SNP.3:19306197 chr03:019306197 0 W/19306197-19306197 FN3909-S SNP C -> T AC=1;AN=158;BQB=0.872082;DP=3371;DP4=1641,1607,12,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.86754e-11;MQSB=0.664534;RPB=0.997836;SGB=99.5005;VDB=0.964555;EFF=INTRON(MODIFIER||||798|LOC_Os03g33770|protein_coding|CODING|LOC_Os03g33770.1|4|1) FN4167-S.SNP.3:19309308 chr03:019309308 0 W/19309308-19309308 FN4167-S SNP G -> C AC=1;AN=170;BQB=0.924375;DP=2665;DP4=1258,1333,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.24538e-06;MQSB=0.993669;RPB=0.981823;SGB=10.1134;VDB=0.89913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.3:19309986 chr03:019309986 0 W/19309986-19309986 FN1104-S Single Base Substitution A-G INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2311.SNP.3:19310341 chr03:019310341 0 W/19310341-19310341 FN2311 SNP C -> G AC=1;AN=192;BQB=0.988875;DP=5029;DP4=2409,2298,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=3.61297e-07;MQSB=0.509429;RPB=0.269631;SGB=59.6861;VDB=0.193742;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R131T|235|LOC_Os03g33780|protein_coding|CODING|LOC_Os03g33780.1|3|1) FN-200.SNP.3:19310737 chr03:019310737 0 W/19310737-19310737 FN-200 Single Base Substitution C-A INTRON HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-8.SNP.3:19315672 chr03:019315672 0 W/19315672-19315672 FN-8 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os03g33790 retrotransposon protein, putative, unclassified, expressed SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN4132-S.SNP.3:19315910 chr03:019315910 0 W/19315910-19315910 FN4132-S SNP A -> G AC=2;AN=182;BQB=0.971869;DP=3228;DP4=1765,1372,14,14;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=3.30153e-11;MQSB=0.836924;RPB=0.921117;SGB=120.796;VDB=0.817079;EFF=INTRON(MODIFIER||||282|LOC_Os03g33790|protein_coding|CODING|LOC_Os03g33790.1|2|1) FN-306.SNP.3:19317484 chr03:019317484 0 W/19317484-19317484 FN-306 Single Base Substitution G-T INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN738-S.SNP.3:19319072 chr03:019319072 0 W/19319072-19319072 FN738-S Single Base Substitution G-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN738-S.SNP.3:19319073 chr03:019319073 0 W/19319073-19319073 FN738-S Single Base Substitution C-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN1401-S.SNP.3:19322814 chr03:019322814 0 W/19322814-19322814 FN1401-S Single Base Substitution C-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2724-S.SNP.3:19325189 chr03:019325189 0 W/19325189-19325189 FN2724-S SNP C -> T AC=2;AN=200;BQB=0.325748;DP=4979;DP4=2629,2089,25,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000401687;MQB=4.4643e-26;MQSB=0.276437;RPB=0.995548;SGB=110.245;VDB=0.199452;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K296|900|LOC_Os03g33819|protein_coding|CODING|LOC_Os03g33819.1|2|1) FN919-S.SNP.3:19329637 chr03:019329637 0 W/19329637-19329637 FN919-S Single Base Substitution G-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. W475-4-2.SNP.3:19331810 chr03:019331810 0 W/19331810-19331810 W475-4-2 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g33828 retrotransposon protein, putative, unclassified, expressed SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3799-S.SNP.3:19337962 chr03:019337962 0 W/19337962-19337962 FN3799-S SNP T -> A AC=1;AN=190;BQB=0.997625;DP=2688;DP4=1245,1295,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00207097;MQSB=0.00640663;RPB=0.697994;SGB=21.8853;VDB=0.845268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.3:19344268 chr03:019344268 0 W/19344268-19344268 FN1050-S Single Base Substitution G-A INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN-401.SNP.3:19344795 chr03:019344795 0 W/19344795-19344795 FN-401 Single Base Substitution C-T INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN903-S.SNP.3:19346358 chr03:019346358 0 W/19346358-19346358 FN903-S Single Base Substitution T-C INTERGENIC HOMO SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN3752-S.SNP.3:19352257 chr03:019352257 0 W/19352257-19352257 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.993598;DP=3551;DP4=1552,1870,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.88426e-07;MQSB=0.998013;RPB=0.887947;SGB=36.1006;VDB=0.449211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.3:19357729 chr03:019357729 0 W/19357729-19357729 FN1322-S Single Base Substitution G-A INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN1561-S.SNP.3:19366749 chr03:019366749 0 W/19366749-19366749 FN1561-S Single Base Substitution A-G INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1669-S.SNP.3:19367332 chr03:019367332 0 W/19367332-19367332 FN1669-S SNP G -> T AC=2;AN=188;BQB=0.0630577;DP=2512;DP4=1253,1214,12,14;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00597134;MQB=5.9153e-08;MQSB=0.0600395;RPB=0.977667;SGB=20.9711;VDB=0.812268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.3:19373317 chr03:019373317 0 W/19373317-19373317 FN1716-S SNP C -> G AC=1;AN=188;BQB=0.409462;DP=2100;DP4=1053,976,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.38662e-09;MQSB=0.999696;RPB=0.629768;SGB=26.0762;VDB=0.13015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R11G|111|LOC_Os03g33950|protein_coding|CODING|LOC_Os03g33950.1|1|1) FN-263.SNP.3:19377074 chr03:019377074 0 W/19377074-19377074 FN-263 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g33960 retrotransposon protein, putative, unclassified SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3387-S.SNP.3:19383665 chr03:019383665 0 W/19383665-19383665 FN3387-S SNP A -> C AC=1;AN=184;BQB=0.688979;DP=2546;DP4=1154,1329,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00549882;MQB=0.0033192;MQSB=4.2007e-20;RPB=0.985517;SGB=39.2697;VDB=0.853616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.3:19390804 chr03:019390804 0 W/19390804-19390804 FN1180-S Single Base Substitution A-T INTRON HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN4204-S.SNP.3:19391369 chr03:019391369 0 W/19391369-19391369 FN4204-S SNP C -> G AC=1;AN=170;BQB=0.993765;DP=2824;DP4=1595,1101,13,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.87749e-13;MQSB=0.954491;RPB=0.907195;SGB=36.9825;VDB=0.0540854;EFF=INTRON(MODIFIER||||88|LOC_Os03g33980|protein_coding|CODING|LOC_Os03g33980.1|1|1) FN-102.SNP.3:19392442 chr03:019392442 0 W/19392442-19392442 FN-102 Single Base Substitution G-C INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN4098-S.SNP.3:19394700 chr03:019394700 0 W/19394700-19394700 FN4098-S SNP C -> A AC=1;AN=182;BQB=0.915933;DP=3157;DP4=1632,1423,8,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.74789e-09;MQSB=0.99024;RPB=0.754931;SGB=60.2037;VDB=0.469001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.3:19398882 chr03:019398882 0 W/19398882-19398882 FN2230-S SNP T -> C AC=1;AN=190;BQB=0.938256;DP=5078;DP4=2161,2557,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.76539e-17;MQSB=0.612244;RPB=0.0844218;SGB=100.07;VDB=0.16276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.3:19399716 chr03:019399716 0 W/19399716-19399716 FN3839-S SNP T -> C AC=1;AN=190;BQB=0.916433;DP=2774;DP4=1199,1440,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44897e-14;MQSB=0.928528;RPB=0.193326;SGB=85.8548;VDB=0.162074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.3:19400304 chr03:019400304 0 W/19400304-19400304 FN3512-S SNP G -> C AC=1;AN=188;BQB=0.87255;DP=2934;DP4=1248,1384,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000648396;MQSB=0.999918;RPB=0.778879;SGB=35.3493;VDB=0.949715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.3:19403080 chr03:019403080 0 W/19403080-19403080 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.813191;DP=4920;DP4=2334,2201,23,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.51019e-17;MQSB=0.99908;RPB=0.853268;SGB=71.1676;VDB=0.577153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.3:19406393 chr03:019406393 0 W/19406393-19406393 FN1230-S Single Base Substitution C-T INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2637-S.SNP.3:19407007 chr03:019407007 0 W/19407007-19407007 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.999504;DP=4634;DP4=2274,2104,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000215796;MQB=5.61192e-09;MQSB=0.834981;RPB=0.273249;SGB=72.6852;VDB=0.600175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.3:19407891 chr03:019407891 0 W/19407891-19407891 FN2578-S SNP C -> T AC=1;AN=198;BQB=0.796131;DP=4225;DP4=2148,1892,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.05436e-06;MQSB=0.844016;RPB=0.785148;SGB=22.1736;VDB=0.34588;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.3:19410152 chr03:019410152 0 W/19410152-19410152 FN1113-S Single Base Substitution A-G INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2122-S.SNP.3:19411728 chr03:019411728 0 W/19411728-19411728 FN2122-S SNP A -> T AC=1;AN=168;BQB=0.663427;DP=3746;DP4=1590,2113,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.87759e-13;MQSB=0.991129;RPB=0.991859;SGB=22.7913;VDB=0.496571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.3:19417079 chr03:019417079 0 W/19417079-19417079 FN2209-S SNP G -> T AC=1;AN=190;BQB=0.963578;DP=2617;DP4=1623,733,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000382117;MQB=0.0112098;MQSB=3.92355e-23;RPB=0.490637;SGB=26.3271;VDB=0.841706;EFF=UTR_5_PRIME(MODIFIER||41||326|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.1|1|1),UTR_5_PRIME(MODIFIER||41||287|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.2|1|1),UTR_5_PRIME(MODIFIER||41||272|LOC_Os03g34040|protein_coding|CODING|LOC_Os03g34040.3|1|1) FN3715-S.SNP.3:19418343 chr03:019418343 0 W/19418343-19418343 FN3715-S SNP G -> T AC=2;AN=190;BQB=0.999424;DP=1888;DP4=646,1167,7,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.51097e-13;MQSB=0.00905323;RPB=0.988241;SGB=117.403;VDB=0.793503;EFF=INTERGENIC(MODIFIER||||||||||1) FN840-S.SNP.3:19421658 chr03:019421658 0 W/19421658-19421658 FN840-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g34070 retrotransposon protein, putative, unclassified, expressed SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN721-S.SNP.3:19422710 chr03:019422710 0 W/19422710-19422710 FN721-S Single Base Substitution A-T INTRON HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2094-S.SNP.3:19428545 chr03:019428545 0 W/19428545-19428545 FN2094-S SNP T -> C AC=2;AN=168;BQB=0.622003;DP=2755;DP4=1261,1437,12,23;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=3.45294e-13;MQSB=0.999999;RPB=0.63891;SGB=70.8011;VDB=0.783505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.3:19429898 chr03:019429898 0 W/19429898-19429898 FN3871-S SNP C -> T AC=1;AN=158;BQB=0.343314;DP=2292;DP4=1194,993,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.78349e-05;MQSB=0.765987;RPB=0.243823;SGB=21.4493;VDB=0.58044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.3:19430367 chr03:019430367 0 W/19430367-19430367 FN2311 SNP C -> T AC=1;AN=192;BQB=0.978511;DP=4680;DP4=2380,1986,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.13396e-17;MQSB=0.93988;RPB=0.258308;SGB=32.3844;VDB=0.415577;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E168K|220|LOC_Os03g34096|protein_coding|CODING|LOC_Os03g34096.1|2|1) FN2172-S.SNP.3:19431146 chr03:019431146 0 W/19431146-19431146 FN2172-S SNP A -> T AC=1;AN=168;BQB=0.0266265;DP=3826;DP4=1831,1943,15,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.42488e-10;MQSB=0.812717;RPB=0.146421;SGB=-45.7659;VDB=0.587647;EFF=INTRON(MODIFIER||||220|LOC_Os03g34096|protein_coding|CODING|LOC_Os03g34096.1|1|1) FN-265.SNP.3:19431477 chr03:019431477 0 W/19431477-19431477 FN-265 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g34096 retrotransposon protein, putative, unclassified SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2594-S.SNP.3:19432351 chr03:019432351 0 W/19432351-19432351 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.970453;DP=3641;DP4=1675,1759,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.60418e-05;MQSB=0.976596;RPB=0.471533;SGB=40.3588;VDB=0.474122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P338S|368|LOC_Os03g34102|protein_coding|CODING|LOC_Os03g34102.1|2|1) FN-74.SNP.3:19434461 chr03:019434461 0 W/19434461-19434461 FN-74 Single Base Substitution T-G INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1163-S.SNP.3:19440863 chr03:019440863 0 W/19440863-19440863 FN1163-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g34120 hypothetical protein SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3386-S.SNP.3:19445029 chr03:019445029 0 W/19445029-19445029 FN3386-S SNP G -> T AC=2;AN=184;BQB=0.921068;DP=2861;DP4=1114,1626,12,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000349528;MQB=1.3037e-11;MQSB=0.760773;RPB=0.966478;SGB=74.4875;VDB=0.64766;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.3:19446826 chr03:019446826 0 W/19446826-19446826 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.925913;DP=2720;DP4=1351,1301,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00147059;MQB=0.00648264;MQSB=0.813909;RPB=0.941129;SGB=28.7043;VDB=0.772939;EFF=INTRON(MODIFIER||||404|LOC_Os03g34140|protein_coding|CODING|LOC_Os03g34140.1|3|1) W466-5-1.SNP.3:19447648 chr03:019447648 0 W/19447648-19447648 W466-5-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g34140 retrotransposon protein, putative, Ty1-copia subclass SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2577-S.SNP.3:19450058 chr03:019450058 0 W/19450058-19450058 FN2577-S SNP G -> C AC=1;AN=198;BQB=0.99956;DP=4174;DP4=1989,1972,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0122185;MQB=0.173602;MQSB=0.99271;RPB=0.999888;SGB=47.3393;VDB=0.543287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.3:19452706 chr03:019452706 0 W/19452706-19452706 FN-257 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN427-S.SNP.3:19453900 chr03:019453900 0 W/19453900-19453900 FN427-S Single Base Substitution T-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN_N1-150-1.SNP.3:19457437 chr03:019457437 0 W/19457437-19457437 FN_N1-150-1 Single Base Substitution G-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2646-S.SNP.3:19458240 chr03:019458240 0 W/19458240-19458240 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.403633;DP=4682;DP4=2443,2015,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05796e-11;MQSB=0.924044;RPB=0.314638;SGB=17.5158;VDB=0.697089;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A328T|388|LOC_Os03g34170|protein_coding|CODING|LOC_Os03g34170.1|2|1) FN3452-S.SNP.3:19468483 chr03:019468483 0 W/19468483-19468483 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.844479;DP=4661;DP4=2281,2199,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=17;MQ0F=0.375027;MQB=0.272474;MQSB=0;RPB=0.947989;SGB=62.3078;VDB=0.0278645;EFF=INTRON(MODIFIER||||1652|LOC_Os03g34190|protein_coding|CODING|LOC_Os03g34190.1|5|1) FN3729-S.SNP.3:19468537 chr03:019468537 0 W/19468537-19468537 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.97482;DP=4074;DP4=2043,1878,21,15;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.396171;MQB=0.21114;MQSB=0;RPB=0.747428;SGB=117.84;VDB=0.413629;EFF=INTRON(MODIFIER||||1652|LOC_Os03g34190|protein_coding|CODING|LOC_Os03g34190.1|5|1) W472-5-1.SNP.3:19468537 chr03:019468537 0 W/19468537-19468537 W472-5-1 Single Base Substitution C-T INTRON HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3872-S.SNP.3:19472971 chr03:019472971 0 W/19472971-19472971 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.589418;DP=2841;DP4=1372,1322,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0200634;MQB=0.0168026;MQSB=0.980318;RPB=0.562507;SGB=42.6978;VDB=0.945914;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.3:19476472 chr03:019476472 0 W/19476472-19476472 FN462-S Single Base Substitution T-C INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2183-S.SNP.3:19481881 chr03:019481881 0 W/19481881-19481881 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.751324;DP=5368;DP4=2766,2295,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.87981e-14;MQSB=0.399022;RPB=0.270924;SGB=103.624;VDB=0.733711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P163S|401|LOC_Os03g34210|protein_coding|CODING|LOC_Os03g34210.1|4|1) FN-97.SNP.3:19489442 chr03:019489442 0 W/19489442-19489442 FN-97 Single Base Substitution A-T INTRON HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-97.SNP.3:19489443 chr03:019489443 0 W/19489443-19489443 FN-97 Single Base Substitution A-T INTRON HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2109-S.SNP.3:19489490 chr03:019489490 0 W/19489490-19489490 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.0324719;DP=4179;DP4=2105,2017,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.8634e-10;MQSB=0.996044;RPB=0.583228;SGB=-151.471;VDB=0.483948;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G131S|433|LOC_Os03g34220|protein_coding|CODING|LOC_Os03g34220.1|3|1) FN708-S.SNP.3:19492209 chr03:019492209 0 W/19492209-19492209 FN708-S Single Base Substitution T-C INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1382-S.SNP.3:19498150 chr03:019498150 0 W/19498150-19498150 FN1382-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g34240 retrotransposon protein, putative, unclassified, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3418-S.SNP.3:19499940 chr03:019499940 0 W/19499940-19499940 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.992711;DP=3419;DP4=1688,1657,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00233987;MQB=7.77593e-07;MQSB=0.962184;RPB=0.995763;SGB=53.2642;VDB=0.5463;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W273*|574|LOC_Os03g34250|protein_coding|CODING|LOC_Os03g34250.1|2|1);LOF=(LOC_Os03g34250|LOC_Os03g34250|1|1.00);NMD=(LOC_Os03g34250|LOC_Os03g34250|1|1.00) FN1151-S.SNP.3:19507020 chr03:019507020 0 W/19507020-19507020 FN1151-S Single Base Substitution A-G INTRON HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1022-S.SNP.3:19507494 chr03:019507494 0 W/19507494-19507494 FN1022-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1009-S.SNP.3:19508008 chr03:019508008 0 W/19508008-19508008 FN1009-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g34270 retrotransposon protein, putative, unclassified, expressed SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1009-S.SNP.3:19508009 chr03:019508009 0 W/19508009-19508009 FN1009-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g34270 retrotransposon protein, putative, unclassified, expressed SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN2214-S.SNP.3:19508198 chr03:019508198 0 W/19508198-19508198 FN2214-S SNP G -> A AC=1;AN=190;BQB=0.909812;DP=4124;DP4=2047,1796,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000484966;MQB=7.41045e-13;MQSB=0.00476338;RPB=0.307177;SGB=96.5165;VDB=0.055541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R608W|931|LOC_Os03g34270|protein_coding|CODING|LOC_Os03g34270.1|2|1),SPLICE_SITE_REGION(LOW||||931|LOC_Os03g34270|protein_coding|CODING|LOC_Os03g34270.1|2|1) FN1527-S.SNP.3:19517377 chr03:019517377 0 W/19517377-19517377 FN1527-S Single Base Substitution C-T INTRON Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2592-S.SNP.3:19523407 chr03:019523407 0 W/19523407-19523407 FN2592-S SNP A -> T AC=1;AN=198;BQB=0.9743;DP=4168;DP4=2056,1922,15,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.56317e-13;MQSB=0.963805;RPB=0.992064;SGB=61.7198;VDB=0.592253;EFF=INTRON(MODIFIER||||417|LOC_Os03g34300|protein_coding|CODING|LOC_Os03g34300.1|1|1),INTRON(MODIFIER||||372|LOC_Os03g34300|protein_coding|CODING|LOC_Os03g34300.2|1|1) FN2340.SNP.3:19526801 chr03:019526801 0 W/19526801-19526801 FN2340 SNP A -> G AC=1;AN=192;BQB=0.5491;DP=4158;DP4=2102,1714,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.0002405;MQB=6.64148e-06;MQSB=3.71051e-06;RPB=0.99975;SGB=-0.466926;VDB=0.436305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.3:19532254 chr03:019532254 0 W/19532254-19532254 FN2704-S SNP A -> G AC=1;AN=200;BQB=0.955595;DP=4984;DP4=2465,2210,16,29;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67478e-23;MQSB=0.997532;RPB=0.937296;SGB=102.43;VDB=0.466394;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.3:19534251 chr03:019534251 0 W/19534251-19534251 FN995-S Single Base Substitution T-G INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN3748-S.SNP.3:19534312 chr03:019534312 0 W/19534312-19534312 FN3748-S SNP C -> T AC=2;AN=190;BQB=0.93989;DP=1926;DP4=1044,790,14,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.21758e-09;MQSB=0.983042;RPB=0.871331;SGB=76.4186;VDB=0.16249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.3:19538815 chr03:019538815 0 W/19538815-19538815 FN3355-S SNP G -> T AC=1;AN=184;BQB=0.722107;DP=3417;DP4=1774,1523,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.33191e-07;MQSB=0.892322;RPB=0.931029;SGB=66.8296;VDB=0.849155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.3:19540293 chr03:019540293 0 W/19540293-19540293 FN1252-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3881-S.SNP.3:19551647 chr03:019551647 0 W/19551647-19551647 FN3881-S SNP T -> C AC=1;AN=158;BQB=4.02939e-05;DP=6579;DP4=2260,2776,81,27;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.132087;MQB=0.284964;MQSB=4.85793e-12;RPB=0.67128;SGB=-2380.15;VDB=0.0842966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.3:19551771 chr03:019551771 0 W/19551771-19551771 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.0376996;DP=5163;DP4=2065,2657,24,15;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0815417;MQB=4.43704e-07;MQSB=5.38601e-15;RPB=0.0297858;SGB=-786.019;VDB=0.163371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1493-S.SNP.3:19556062 chr03:019556062 0 W/19556062-19556062 FN1493-S Single Base Substitution G-C INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2320.SNP.3:19556121 chr03:019556121 0 W/19556121-19556121 FN2320 SNP C -> A AC=1;AN=192;BQB=0.000901546;DP=10560;DP4=4166,5085,19,17;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.0514205;MQB=0.0326876;MQSB=0.836125;RPB=0.484271;SGB=-165.718;VDB=0.995275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.3:19562978 chr03:019562978 0 W/19562978-19562978 FN1456-S Single Base Substitution G-A INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. W470-2-1.SNP.3:19567133 chr03:019567133 0 W/19567133-19567133 W470-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN696-S.SNP.3:19572778 chr03:019572778 0 W/19572778-19572778 FN696-S Single Base Substitution G-C INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1483-S.SNP.3:19574936 chr03:019574936 0 W/19574936-19574936 FN1483-S Single Base Substitution C-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN601-S.SNP.3:19585872 chr03:019585872 0 W/19585872-19585872 FN601-S Single Base Substitution A-G INTRON HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1633-S.SNP.3:19590162 chr03:019590162 0 W/19590162-19590162 FN1633-S Single Base Substitution C-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. W279-4-1.SNP.3:19590610 chr03:019590610 0 W/19590610-19590610 W279-4-1 Single Base Substitution A-G INTRON HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3757-S.SNP.3:19613857 chr03:019613857 0 W/19613857-19613857 FN3757-S SNP G -> A AC=1;AN=190;BQB=0.932747;DP=3305;DP4=1634,1501,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79427e-14;MQSB=0.911888;RPB=0.980188;SGB=108.296;VDB=0.372995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.3:19615387 chr03:019615387 0 W/19615387-19615387 FN3910-S SNP A -> T AC=1;AN=158;BQB=0.753945;DP=2524;DP4=1019,1395,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.46871e-08;MQSB=0.893127;RPB=0.729296;SGB=47.5512;VDB=0.186786;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S57T|212|LOC_Os03g35370|protein_coding|CODING|LOC_Os03g35370.1|2|1) FN570-S.SNP.3:19616088 chr03:019616088 0 W/19616088-19616088 FN570-S Single Base Substitution G-A INTRON HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2671-S.SNP.3:19617805 chr03:019617805 0 W/19617805-19617805 FN2671-S SNP C -> A AC=1;AN=200;BQB=0.990861;DP=4838;DP4=2281,2310,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00144688;MQB=4.64436e-09;MQSB=0.990852;RPB=0.0745436;SGB=54.6902;VDB=0.287081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A216D|1028|LOC_Os03g35380|protein_coding|CODING|LOC_Os03g35380.1|1|1) FN4031-S.SNP.3:19622738 chr03:019622738 0 W/19622738-19622738 FN4031-S SNP G -> A AC=1;AN=168;BQB=0.434646;DP=3290;DP4=1498,1681,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27486e-09;MQSB=0.980332;RPB=0.771029;SGB=75.9177;VDB=0.263211;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F1418|1908|LOC_Os03g35390|protein_coding|CODING|LOC_Os03g35390.1|4|1) FN754-S.SNP.3:19623241 chr03:019623241 0 W/19623241-19623241 FN754-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g35390 retrotransposon protein, putative, unclassified, expressed SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2451.SNP.3:19627580 chr03:019627580 0 W/19627580-19627580 FN2451 SNP T -> A AC=1;AN=200;BQB=0.949761;DP=4615;DP4=2104,2080,11,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0169014;MQB=0.000149518;MQSB=1.81122e-20;RPB=0.778335;SGB=76.3213;VDB=0.324419;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.3:19633535 chr03:019633535 0 W/19633535-19633535 FN944-S Single Base Substitution G-A INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN745-S.SNP.3:19635456 chr03:019635456 0 W/19635456-19635456 FN745-S Single Base Substitution C-T INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN1735-S.SNP.3:19640645 chr03:019640645 0 W/19640645-19640645 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.0252431;DP=2621;DP4=1273,1297,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.103396;MQB=0.566426;MQSB=0.839177;RPB=0.893292;SGB=-153.343;VDB=0.589323;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.3:19642338 chr03:019642338 0 W/19642338-19642338 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2551-S.SNP.3:19642978 chr03:019642978 0 W/19642978-19642978 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.97266;DP=4270;DP4=1942,2120,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.62393e-13;MQSB=0.924718;RPB=0.783048;SGB=83.2905;VDB=0.867841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D1370N|1436|LOC_Os03g35430|protein_coding|CODING|LOC_Os03g35430.1|2|1) FN2485.SNP.3:19644427 chr03:019644427 0 W/19644427-19644427 FN2485 SNP T -> A AC=2;AN=200;BQB=0.529537;DP=4788;DP4=2154,2322,25,14;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00730994;MQB=6.34228e-05;MQSB=0.665402;RPB=0.136068;SGB=43.1985;VDB=0.400531;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K887*|1436|LOC_Os03g35430|protein_coding|CODING|LOC_Os03g35430.1|2|1) FN-135.SNP.3:19644858 chr03:019644858 0 W/19644858-19644858 FN-135 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g35430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN1221-S.SNP.3:19650168 chr03:019650168 0 W/19650168-19650168 FN1221-S Single Base Substitution T-C INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN4174-S.SNP.3:19650955 chr03:019650955 0 W/19650955-19650955 FN4174-S SNP C -> G AC=1;AN=170;BQB=0.964171;DP=2228;DP4=1011,1137,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=9.37385e-05;MQSB=2.29434e-07;RPB=0.754912;SGB=25.6601;VDB=0.785892;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.3:19650989 chr03:019650989 0 W/19650989-19650989 FN714-S Single Base Substitution G-C INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN4046-S.SNP.3:19660020 chr03:019660020 0 W/19660020-19660020 FN4046-S SNP G -> T AC=2;AN=168;BQB=0.980604;DP=2482;DP4=1090,1264,12,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.07193e-16;MQSB=0.9282;RPB=0.63273;SGB=127.497;VDB=0.419708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L519I|1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|6|1) FN3846-S.SNP.3:19661781 chr03:019661781 0 W/19661781-19661781 FN3846-S SNP C -> T AC=1;AN=190;BQB=0.831263;DP=2948;DP4=1491,1360,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.84895e-05;MQSB=0.972126;RPB=0.700171;SGB=44.5415;VDB=0.0384452;EFF=INTRON(MODIFIER||||1210|LOC_Os03g35454|protein_coding|CODING|LOC_Os03g35454.1|2|1) FN449-S.SNP.3:19662869 chr03:019662869 0 W/19662869-19662869 FN449-S Single Base Substitution C-G INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN570-S.SNP.3:19666545 chr03:019666545 0 W/19666545-19666545 FN570-S Single Base Substitution C-T INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2209-S.SNP.3:19668254 chr03:019668254 0 W/19668254-19668254 FN2209-S SNP C -> T AC=1;AN=190;BQB=0.999843;DP=4848;DP4=2645,1951,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.93208e-06;MQSB=0.491069;RPB=0.848988;SGB=35.4339;VDB=0.757595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.3:19673080 chr03:019673080 0 W/19673080-19673080 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.932086;DP=4928;DP4=2406,2284,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34592e-13;MQSB=0.23453;RPB=0.731765;SGB=42.5108;VDB=0.381179;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.3:19674573 chr03:019674573 0 W/19674573-19674573 FN631-S Single Base Substitution C-G INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN672-S.SNP.3:19675197 chr03:019675197 0 W/19675197-19675197 FN672-S Single Base Substitution G-C INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3521-S.SNP.3:19675627 chr03:019675627 0 W/19675627-19675627 FN3521-S SNP C -> T AC=2;AN=188;BQB=0.746534;DP=3245;DP4=1687,1384,15,8;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000308166;MQB=8.0183e-09;MQSB=0.000125036;RPB=0.850157;SGB=16.3413;VDB=0.46888;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.3:19677465 chr03:019677465 0 W/19677465-19677465 FN579-S Single Base Substitution C-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN_N1-213-1.SNP.3:19677567 chr03:019677567 0 W/19677567-19677567 FN_N1-213-1 Single Base Substitution T-C Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3948-S.SNP.3:19678621 chr03:019678621 0 W/19678621-19678621 FN3948-S SNP C -> G AC=1;AN=168;BQB=0.684999;DP=2639;DP4=1401,1113,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0128837;MQB=0.00613274;MQSB=1.53892e-15;RPB=0.160893;SGB=82.7794;VDB=0.835238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.3:19680090 chr03:019680090 0 W/19680090-19680090 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.64958;DP=4155;DP4=1981,2012,13,5;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0045728;MQB=0.000487524;MQSB=0.0677666;RPB=0.535583;SGB=54.5295;VDB=0.61816;EFF=INTRON(MODIFIER||||159|LOC_Os03g35500|protein_coding|CODING|LOC_Os03g35500.1|1|1) FN473-S.SNP.3:19680908 chr03:019680908 0 W/19680908-19680908 FN473-S Single Base Substitution G-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1304-S.SNP.3:19683147 chr03:019683147 0 W/19683147-19683147 FN1304-S Single Base Substitution G-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1304-S.SNP.3:19683148 chr03:019683148 0 W/19683148-19683148 FN1304-S Single Base Substitution C-T INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2598-S.SNP.3:19684362 chr03:019684362 0 W/19684362-19684362 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.698701;DP=4220;DP4=1975,2044,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00829384;MQB=0.0126581;MQSB=0.178938;RPB=0.975841;SGB=25.7687;VDB=0.956308;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN-289 Single Base Substitution C-T INTRON HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN1043-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN1043-S Single Base Substitution C-T INTRON HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1070-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN1070-S Single Base Substitution C-T INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2275-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN2275-S SNP C -> T AC=2;AN=190;BQB=0.723682;DP=4499;DP4=2020,2140,32,45;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.181596;MQB=0.999135;MQSB=0.317521;RPB=0.53926;SGB=210.422;VDB=0.449781;EFF=INTRON(MODIFIER||||1568|LOC_Os03g35540|protein_coding|CODING|LOC_Os03g35540.1|1|1) FN3393-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN3393-S SNP C -> T AC=2;AN=184;BQB=0.949304;DP=2738;DP4=1385,1264,16,11;HOB=0.0215028;ICB=0.494625;MQ=20;MQ0F=0.362673;MQB=0.759411;MQSB=0;RPB=0.81916;SGB=85.0529;VDB=0.63027;EFF=INTRON(MODIFIER||||1568|LOC_Os03g35540|protein_coding|CODING|LOC_Os03g35540.1|1|1) FN3790-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.976243;DP=2456;DP4=1215,1168,12,1;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.368893;MQB=0.124234;MQSB=0;RPB=0.773466;SGB=53.6492;VDB=0.877781;EFF=INTRON(MODIFIER||||1568|LOC_Os03g35540|protein_coding|CODING|LOC_Os03g35540.1|1|1) FN3926-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN3926-S SNP C -> T AC=2;AN=158;BQB=0.992176;DP=2196;DP4=995,1085,23,16;HOB=0.024996;ICB=0.493752;MQ=19;MQ0F=0.384791;MQB=0.995014;MQSB=1.4013e-45;RPB=0.126198;SGB=135.98;VDB=0.39245;EFF=INTRON(MODIFIER||||1568|LOC_Os03g35540|protein_coding|CODING|LOC_Os03g35540.1|1|1) FN907-S.SNP.3:19696004 chr03:019696004 0 W/19696004-19696004 FN907-S Single Base Substitution C-T INTRON HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2390.SNP.3:19700994 chr03:019700994 0 W/19700994-19700994 FN2390 SNP G -> A AC=1;AN=200;BQB=0.0905796;DP=3823;DP4=1702,1611,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.6362e-09;MQSB=0.147254;RPB=0.448167;SGB=54.6902;VDB=0.284647;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.3:19704332 chr03:019704332 0 W/19704332-19704332 FN1117-S Single Base Substitution C-T INTERGENIC HOMO SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2308.SNP.3:19705327 chr03:019705327 0 W/19705327-19705327 FN2308 SNP T -> C AC=2;AN=192;BQB=0.75859;DP=5258;DP4=2455,2443,16,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.86556e-20;MQSB=0.834191;RPB=0.147389;SGB=-186.332;VDB=0.368571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.3:19718748 chr03:019718748 0 W/19718748-19718748 FN2378 SNP C -> T AC=1;AN=192;BQB=0.511347;DP=5437;DP4=2461,2562,24,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00423027;MQB=1.34716e-13;MQSB=0.199036;RPB=0.368399;SGB=75.0722;VDB=0.718705;EFF=INTERGENIC(MODIFIER||||||||||1) FN-28.SNP.3:19722629 chr03:019722629 0 W/19722629-19722629 FN-28 Single Base Substitution G-T INTERGENIC HET SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN2390.SNP.3:19735294 chr03:019735294 0 W/19735294-19735294 FN2390 SNP T -> G AC=1;AN=200;BQB=0.776935;DP=4662;DP4=1995,2308,10,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=8.47952e-11;MQSB=0.535403;RPB=0.950442;SGB=37.3004;VDB=0.712271;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.3:19739541 chr03:019739541 0 W/19739541-19739541 FN1335-S Single Base Substitution G-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3852-S.SNP.3:19740705 chr03:019740705 0 W/19740705-19740705 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.997241;DP=2369;DP4=1042,1242,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.01225e-05;MQSB=0.728558;RPB=0.341337;SGB=19.0798;VDB=0.801406;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q328*|417|LOC_Os03g35640|protein_coding|CODING|LOC_Os03g35640.1|5|1) FN755-S.SNP.3:19744437 chr03:019744437 0 W/19744437-19744437 FN755-S Single Base Substitution A-G INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-173.SNP.3:19746861 chr03:019746861 0 W/19746861-19746861 FN-173 Single Base Substitution A-G INTRON HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN1379-S.SNP.3:19747713 chr03:019747713 0 W/19747713-19747713 FN1379-S Single Base Substitution T-C INTRON Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN3058-S.SNP.3:19748915 chr03:019748915 0 W/19748915-19748915 FN3058-S SNP C -> G AC=1;AN=184;BQB=0.932369;DP=3002;DP4=1683,1227,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97242e-11;MQSB=0.91452;RPB=0.783391;SGB=84.9167;VDB=0.850274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.3:19750285 chr03:019750285 0 W/19750285-19750285 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.0215029;DP=3139;DP4=1622,1461,17,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.23159e-15;MQSB=0.995504;RPB=0.0303842;SGB=-158.61;VDB=0.598555;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.3:19750845 chr03:019750845 0 W/19750845-19750845 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.160851;DP=3262;DP4=1300,1908,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.78164e-07;MQSB=0.97961;RPB=0.23332;SGB=-103.201;VDB=0.0848592;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.3:19751112 chr03:019751112 0 W/19751112-19751112 FN3592-S SNP G -> A AC=1;AN=188;BQB=0.936604;DP=4352;DP4=2893,1350,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.80166e-17;MQSB=0.749546;RPB=0.992972;SGB=135.302;VDB=0.159201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.3:19751163 chr03:019751163 0 W/19751163-19751163 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.983562;DP=5253;DP4=2772,2176,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62202e-07;MQSB=0.999532;RPB=0.767973;SGB=54.2646;VDB=0.753212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.3:19751257 chr03:019751257 0 W/19751257-19751257 FN1529-S Single Base Substitution C-T INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2138-S.SNP.3:19763328 chr03:019763328 0 W/19763328-19763328 FN2138-S SNP C -> G AC=1;AN=168;BQB=0.835894;DP=2772;DP4=1817,919,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94285e-10;MQSB=0.990844;RPB=0.788704;SGB=34.3388;VDB=0.80389;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.3:19763329 chr03:019763329 0 W/19763329-19763329 FN4108-S SNP G -> A AC=1;AN=180;BQB=0.99389;DP=2575;DP4=1217,1297,6,7;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=2.25599e-07;MQSB=0.996345;RPB=0.841786;SGB=53.1331;VDB=0.617917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.3:19773192 chr03:019773192 0 W/19773192-19773192 FN3378-S SNP G -> T AC=2;AN=184;BQB=0.980937;DP=3201;DP4=1285,1836,9,14;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0.256482;MQB=0.453127;MQSB=0;RPB=0.862248;SGB=98.4821;VDB=0.761885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.3:19773193 chr03:019773193 0 W/19773193-19773193 FN3378-S SNP T -> G AC=2;AN=184;BQB=0.818119;DP=3206;DP4=1277,1762,10,16;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0.248284;MQB=0.529003;MQSB=0;RPB=0.956819;SGB=51.0148;VDB=0.729447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.3:19776116 chr03:019776116 0 W/19776116-19776116 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.928115;DP=2870;DP4=1454,1320,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.62597e-08;MQSB=0.55168;RPB=0.200522;SGB=32.5467;VDB=0.43896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.3:19776117 chr03:019776117 0 W/19776117-19776117 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.994899;DP=2867;DP4=1426,1341,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.16093e-08;MQSB=0.663209;RPB=0.365409;SGB=32.5467;VDB=0.815244;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.3:19785143 chr03:019785143 0 W/19785143-19785143 FN504-S Single Base Substitution G-A INTRON HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2729-S.SNP.3:19789352 chr03:019789352 0 W/19789352-19789352 FN2729-S SNP G -> T AC=1;AN=200;BQB=0.963383;DP=4889;DP4=2451,2178,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6905e-13;MQSB=0.938792;RPB=0.978992;SGB=72.7161;VDB=0.939928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.3:19797875 chr03:019797875 0 W/19797875-19797875 FN2281 SNP C -> G AC=1;AN=192;BQB=0.698966;DP=4782;DP4=2402,2142,15,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.45735e-15;MQSB=0.794212;RPB=0.774618;SGB=29.2557;VDB=0.64012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.3:19799884 chr03:019799884 0 W/19799884-19799884 FN2284 SNP G -> A AC=1;AN=192;BQB=0.890809;DP=4798;DP4=2215,2236,10,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00020842;MQB=1.80198e-17;MQSB=0.975865;RPB=0.219233;SGB=33.9487;VDB=0.21398;EFF=INTRON(MODIFIER||||1152|LOC_Os03g35740|protein_coding|CODING|LOC_Os03g35740.1|5|1) FN1648-S.SNP.3:19800868 chr03:019800868 0 W/19800868-19800868 FN1648-S Single Base Substitution C-T INTRON Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN2267-S.SNP.3:19802970 chr03:019802970 0 W/19802970-19802970 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.297226;DP=4785;DP4=2283,2132,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.4926e-06;MQSB=0.688978;RPB=0.181682;SGB=15.9981;VDB=0.0693265;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q153*|1152|LOC_Os03g35740|protein_coding|CODING|LOC_Os03g35740.1|2|1);LOF=(LOC_Os03g35740|LOC_Os03g35740|1|1.00);NMD=(LOC_Os03g35740|LOC_Os03g35740|1|1.00) FN2421.SNP.3:19803203 chr03:019803203 0 W/19803203-19803203 FN2421 SNP C -> T AC=1;AN=200;BQB=0.933794;DP=4528;DP4=2316,2001,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.53995e-06;MQSB=0.470148;RPB=0.962565;SGB=11.2488;VDB=0.286863;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W75*|1152|LOC_Os03g35740|protein_coding|CODING|LOC_Os03g35740.1|2|1);LOF=(LOC_Os03g35740|LOC_Os03g35740|1|1.00);NMD=(LOC_Os03g35740|LOC_Os03g35740|1|1.00) FN854-S.SNP.3:19806481 chr03:019806481 0 W/19806481-19806481 FN854-S Single Base Substitution A-G INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2753-S.SNP.3:19807278 chr03:019807278 0 W/19807278-19807278 FN2753-S SNP C -> T AC=2;AN=200;BQB=0.142711;DP=4528;DP4=2247,1942,18,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.22276e-19;MQSB=0.660197;RPB=0.969649;SGB=164.789;VDB=0.271327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.3:19808468 chr03:019808468 0 W/19808468-19808468 FN1745-S SNP C -> T AC=1;AN=188;BQB=0.407084;DP=2408;DP4=1305,1040,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.3137e-07;MQSB=0.986905;RPB=0.0929888;SGB=-37.8212;VDB=0.0788984;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.3:19810247 chr03:019810247 0 W/19810247-19810247 FN-146 Single Base Substitution C-T INTERGENIC HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2625-S.SNP.3:19811511 chr03:019811511 0 W/19811511-19811511 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.647558;DP=5004;DP4=2450,2301,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42302e-15;MQSB=0.925228;RPB=0.752159;SGB=52.9314;VDB=0.173015;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.3:19812115 chr03:019812115 0 W/19812115-19812115 FN902-S Single Base Substitution G-A INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3322-S.SNP.3:19814578 chr03:019814578 0 W/19814578-19814578 FN3322-S SNP G -> C AC=2;AN=184;BQB=0.93669;DP=2944;DP4=1379,1459,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.28377e-13;MQSB=0.812821;RPB=0.826041;SGB=60.4004;VDB=0.674053;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.3:19816560 chr03:019816560 0 W/19816560-19816560 FN3650-S SNP G -> T AC=2;AN=190;BQB=0.95868;DP=2885;DP4=1457,1286,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.5259e-20;MQSB=0.863917;RPB=0.983311;SGB=158.388;VDB=0.0732275;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.3:19818810 chr03:019818810 0 W/19818810-19818810 FN-163 Single Base Substitution C-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-149.SNP.3:19826674 chr03:019826674 0 W/19826674-19826674 FN-149 Single Base Substitution T-A INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1630-S.SNP.3:19830286 chr03:019830286 0 W/19830286-19830286 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3923-S.SNP.3:19832848 chr03:019832848 0 W/19832848-19832848 FN3923-S SNP T -> A AC=1;AN=158;BQB=0.971316;DP=2727;DP4=1313,1324,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1012e-06;MQSB=0.916631;RPB=0.67383;SGB=42.6978;VDB=0.704051;EFF=INTERGENIC(MODIFIER||||||||||1) FN560-S.SNP.3:19833932 chr03:019833932 0 W/19833932-19833932 FN560-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g35788 retrotransposon protein, putative, unclassified, expressed SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1735-S.SNP.3:19834066 chr03:019834066 0 W/19834066-19834066 FN1735-S SNP G -> T AC=1;AN=188;BQB=0.142511;DP=2615;DP4=1370,1194,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.19863e-07;MQSB=0.884024;RPB=0.839937;SGB=-13.3699;VDB=0.507369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T1798K|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|7|1) FN2292.SNP.3:19835721 chr03:019835721 0 W/19835721-19835721 FN2292 SNP C -> T AC=1;AN=192;BQB=0.640766;DP=4960;DP4=2411,2211,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.25041e-12;MQSB=0.63006;RPB=0.751195;SGB=78.9878;VDB=0.329522;EFF=INTRON(MODIFIER||||1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|5|1) FN4047-S.SNP.3:19836713 chr03:019836713 0 W/19836713-19836713 FN4047-S SNP C -> T AC=1;AN=168;BQB=0.99321;DP=2479;DP4=1291,1093,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00322711;MQB=1.96979e-06;MQSB=0.784221;RPB=0.966769;SGB=-0.101747;VDB=0.981086;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S1361|1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|5|1) FN2102-S.SNP.3:19837527 chr03:019837527 0 W/19837527-19837527 FN2102-S SNP A -> C AC=2;AN=168;BQB=0.0664384;DP=2908;DP4=876,1981,10,20;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.00756534;MQB=0.974637;MQSB=0.000950541;RPB=0.333688;SGB=-44.6276;VDB=0.254295;EFF=INTRON(MODIFIER||||1907|LOC_Os03g35788|protein_coding|CODING|LOC_Os03g35788.1|3|1) FN_830-6-1.SNP.3:19838254 chr03:019838254 0 W/19838254-19838254 FN_830-6-1 Single Base Substitution C-T HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1670-S.SNP.3:19844415 chr03:019844415 0 W/19844415-19844415 FN1670-S SNP C -> T AC=2;AN=188;BQB=0.716786;DP=2988;DP4=1830,1121,12,7;HOB=0.0210502;ICB=0.494738;MQ=39;MQ0F=0.020415;MQB=9.94161e-06;MQSB=0.0161961;RPB=0.276704;SGB=57.244;VDB=0.179329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.3:19844818 chr03:019844818 0 W/19844818-19844818 FN2617-S SNP A -> T AC=2;AN=198;BQB=0.941652;DP=4270;DP4=1956,2105,23,30;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00187354;MQB=1.30446e-14;MQSB=0.883083;RPB=0.188359;SGB=237.949;VDB=0.582789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.3:19852552 chr03:019852552 0 W/19852552-19852552 FN1624-S Single Base Substitution T-G INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2583-S.SNP.3:19861301 chr03:019861301 0 W/19861301-19861301 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.934585;DP=5554;DP4=2747,2575,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61353e-10;MQSB=0.995772;RPB=0.947868;SGB=63.4749;VDB=0.660271;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.3:19866294 chr03:019866294 0 W/19866294-19866294 FN3940-S SNP T -> A AC=1;AN=158;BQB=1;DP=2222;DP4=1083,1064,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=5.15353e-08;MQSB=0.0271045;RPB=0.961348;SGB=60.1755;VDB=0.41025;EFF=UTR_5_PRIME(MODIFIER||470||116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|1|1),UTR_5_PRIME(MODIFIER||470||116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|1|1) FN3940-S.SNP.3:19866295 chr03:019866295 0 W/19866295-19866295 FN3940-S SNP C -> A AC=1;AN=158;BQB=0.879912;DP=2235;DP4=1086,1079,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=5.20577e-07;MQSB=0.0236298;RPB=0.999998;SGB=44.1818;VDB=0.600127;EFF=UTR_5_PRIME(MODIFIER||471||116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.1|1|1),UTR_5_PRIME(MODIFIER||471||116|LOC_Os03g35849|protein_coding|CODING|LOC_Os03g35849.2|1|1) FN1650-S.SNP.3:19866781 chr03:019866781 0 W/19866781-19866781 FN1650-S Single Base Substitution A-T START_GAINED HET LOC_Os03g35849 expressed protein SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2158-S.SNP.3:19869828 chr03:019869828 0 W/19869828-19869828 FN2158-S SNP G -> C AC=2;AN=168;BQB=0.859251;DP=3967;DP4=1890,2014,24,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.88531e-21;MQSB=0.986956;RPB=0.976806;SGB=104.832;VDB=0.532779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.3:19871066 chr03:019871066 0 W/19871066-19871066 FN2580-S SNP T -> A AC=2;AN=198;BQB=0.429594;DP=4075;DP4=1743,2057,21,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.53865e-24;MQSB=0.157281;RPB=0.89841;SGB=4.61294;VDB=0.820459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.3:19872110 chr03:019872110 0 W/19872110-19872110 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.445464;DP=4954;DP4=2175,2540,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30966e-12;MQSB=0.862386;RPB=0.906526;SGB=81.8956;VDB=0.63175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.3:19872111 chr03:019872111 0 W/19872111-19872111 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.314579;DP=4943;DP4=2138,2551,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47798e-12;MQSB=0.86333;RPB=0.892895;SGB=65.5058;VDB=0.491618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.3:19874535 chr03:019874535 0 W/19874535-19874535 FN3935-S SNP A -> G AC=1;AN=158;BQB=0.996331;DP=2766;DP4=1317,1340,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.6504e-10;MQSB=0.964914;RPB=0.743389;SGB=73.2838;VDB=0.798852;EFF=INTERGENIC(MODIFIER||||||||||1) FN-12.SNP.3:19921411 chr03:019921411 0 W/19921411-19921411 FN-12 Single Base Substitution G-A INTERGENIC Homo SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN1182-S.SNP.3:19924289 chr03:019924289 0 W/19924289-19924289 FN1182-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN857-S.SNP.3:19929010 chr03:019929010 0 W/19929010-19929010 FN857-S Single Base Substitution G-A INTERGENIC HOMO SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN1317-S.SNP.3:19932096 chr03:019932096 0 W/19932096-19932096 FN1317-S Single Base Substitution T-C INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2794-S.SNP.3:19942313 chr03:019942313 0 W/19942313-19942313 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.881738;DP=4354;DP4=2093,1933,13,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.40221e-17;MQSB=0.992219;RPB=0.747609;SGB=141.451;VDB=0.807069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.3:19943317 chr03:019943317 0 W/19943317-19943317 FN2174-S SNP T -> A AC=1;AN=168;BQB=0.815835;DP=3349;DP4=1935,1390,8,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.1607e-06;MQSB=0.966671;RPB=0.898969;SGB=34.4498;VDB=0.257627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.3:19948924 chr03:019948924 0 W/19948924-19948924 FN2118-S SNP G -> A AC=1;AN=168;BQB=0.0888477;DP=2467;DP4=1333,1070,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.61101e-06;MQSB=0.121979;RPB=0.682773;SGB=-92.9238;VDB=0.025567;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.3:19952129 chr03:019952129 0 W/19952129-19952129 FN728-S Single Base Substitution C-T INTRON HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2360.SNP.3:19952130 chr03:019952130 0 W/19952130-19952130 FN2360 SNP G -> A AC=1;AN=192;BQB=0.209978;DP=4064;DP4=1779,2040,6,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.801e-05;MQSB=0.567181;RPB=0.0426494;SGB=21.9585;VDB=0.0718442;EFF=INTRON(MODIFIER||||425|LOC_Os03g35970|protein_coding|CODING|LOC_Os03g35970.1|5|1) FN1727-S.SNP.3:19953160 chr03:019953160 0 W/19953160-19953160 FN1727-S SNP A -> C AC=1;AN=188;BQB=0.817856;DP=1990;DP4=963,993,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.61641e-06;MQSB=0.85122;RPB=0.965505;SGB=32.441;VDB=0.534093;EFF=INTRON(MODIFIER||||425|LOC_Os03g35970|protein_coding|CODING|LOC_Os03g35970.1|2|1) FN2627-S.SNP.3:19953560 chr03:019953560 0 W/19953560-19953560 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.679545;DP=5330;DP4=2504,2467,8,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0750469;MQB=0.0378248;MQSB=1.43823e-38;RPB=0.812119;SGB=86.5007;VDB=0.11549;EFF=INTRON(MODIFIER||||425|LOC_Os03g35970|protein_coding|CODING|LOC_Os03g35970.1|1|1) FN-184.SNP.3:19955544 chr03:019955544 0 W/19955544-19955544 FN-184 Single Base Substitution G-T INTRON HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN4229-S.SNP.3:19966740 chr03:019966740 0 W/19966740-19966740 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.841612;DP=2488;DP4=1249,1147,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.33897e-09;MQSB=0.999257;RPB=0.865805;SGB=65.6427;VDB=0.234292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.3:19968340 chr03:019968340 0 W/19968340-19968340 FN-119 Single Base Substitution G-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1658-S.SNP.3:19971746 chr03:019971746 0 W/19971746-19971746 FN1658-S SNP A -> G AC=1;AN=188;BQB=0.00181763;DP=3667;DP4=1804,1821,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.8491e-08;MQSB=0.0137504;RPB=0.867573;SGB=-117.892;VDB=0.377443;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P447|1184|LOC_Os03g36000|protein_coding|CODING|LOC_Os03g36000.1|3|1) FN1643-S.SNP.3:19977181 chr03:019977181 0 W/19977181-19977181 FN1643-S Single Base Substitution C-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN753-S.SNP.3:19980071 chr03:019980071 0 W/19980071-19980071 FN753-S Single Base Substitution T-G INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN3539-S.SNP.3:19980538 chr03:019980538 0 W/19980538-19980538 FN3539-S SNP C -> T AC=2;AN=188;BQB=0.917094;DP=3794;DP4=2009,1725,11,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0358461;MQB=5.06625e-07;MQSB=1.99141e-11;RPB=0.834913;SGB=80.782;VDB=0.912004;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D124|300|LOC_Os03g36020|protein_coding|CODING|LOC_Os03g36020.1|1|1) FN3595-S.SNP.3:19980538 chr03:019980538 0 W/19980538-19980538 FN3595-S SNP C -> T AC=1;AN=190;BQB=0.055791;DP=3223;DP4=1517,1608,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0338194;MQB=0.0637489;MQSB=1.2114e-15;RPB=0.607244;SGB=58.2031;VDB=0.763609;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D124|300|LOC_Os03g36020|protein_coding|CODING|LOC_Os03g36020.1|1|1) FN2493.SNP.3:19981076 chr03:019981076 0 W/19981076-19981076 FN2493 SNP T -> C AC=2;AN=200;BQB=0.302994;DP=3769;DP4=1363,2163,13,18;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0336959;MQB=5.05511e-11;MQSB=6.59491e-05;RPB=0.682024;SGB=101.557;VDB=0.850142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.3:19983737 chr03:019983737 0 W/19983737-19983737 FN1297-S Single Base Substitution C-T INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2664-S.SNP.3:19985517 chr03:019985517 0 W/19985517-19985517 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.241109;DP=4394;DP4=2051,2148,5,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0161584;MQB=5.20307e-07;MQSB=0.782685;RPB=0.999324;SGB=54.2646;VDB=0.226476;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E1347|1461|LOC_Os03g36030|protein_coding|CODING|LOC_Os03g36030.1|3|1) W23-2-1.SNP.3:19988728 chr03:019988728 0 W/19988728-19988728 W23-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN704-S.SNP.3:19992793 chr03:019992793 0 W/19992793-19992793 FN704-S Single Base Substitution A-C INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3496-S.SNP.3:19995096 chr03:019995096 0 W/19995096-19995096 FN3496-S SNP A -> G AC=1;AN=188;BQB=0.943054;DP=3527;DP4=1655,1763,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0104905;MQB=0.611113;MQSB=0.171741;RPB=0.878895;SGB=58.0655;VDB=0.0907445;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.3:19995844 chr03:019995844 0 W/19995844-19995844 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.976421;DP=3301;DP4=2290,905,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00514995;MQB=0.0329302;MQSB=4.80526e-07;RPB=0.885485;SGB=27.9928;VDB=0.296573;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.3:19996267 chr03:019996267 0 W/19996267-19996267 FN961-S Single Base Substitution C-T STOP_GAINED HET LOC_Os03g36050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-411.SNP.3:19996278 chr03:019996278 0 W/19996278-19996278 FN-411 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN411-S.SNP.3:19996278 chr03:019996278 0 W/19996278-19996278 FN411-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3518-S.SNP.3:19999903 chr03:019999903 0 W/19999903-19999903 FN3518-S SNP T -> A AC=2;AN=188;BQB=0.952358;DP=3748;DP4=1846,1780,18,13;HOB=0.0210502;ICB=0.494738;MQ=39;MQ0F=0.078175;MQB=0.00354648;MQSB=3.45689e-16;RPB=0.05429;SGB=99.7635;VDB=0.110711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Atc|F1323I|1474|LOC_Os03g36050|protein_coding|CODING|LOC_Os03g36050.1|2|1) FN3469-S.SNP.3:20002278 chr03:020002278 0 W/20002278-20002278 FN3469-S SNP G -> A AC=1;AN=184;BQB=0.995413;DP=2852;DP4=1494,1284,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00666199;MQB=0.893264;MQSB=0.000889302;RPB=0.573938;SGB=39.2697;VDB=0.696731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.3:20002821 chr03:020002821 0 W/20002821-20002821 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.887215;DP=4926;DP4=2312,2327,17,10;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0653674;MQB=0.220444;MQSB=3.89108e-21;RPB=0.635791;SGB=55.5366;VDB=0.314499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.3:20003425 chr03:020003425 0 W/20003425-20003425 FN2442 SNP G -> A AC=1;AN=200;BQB=0.99973;DP=4780;DP4=2348,2144,13,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0194561;MQB=0.0015248;MQSB=3.7823e-16;RPB=0.58524;SGB=47.7211;VDB=0.414899;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.3:20007485 chr03:020007485 0 W/20007485-20007485 FN320-S Single Base Substitution C-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2588-S.SNP.3:20008358 chr03:020008358 0 W/20008358-20008358 FN2588-S SNP C -> A AC=1;AN=198;BQB=0.319908;DP=4310;DP4=1912,2167,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.66068e-19;MQSB=0.501851;RPB=0.681399;SGB=136.856;VDB=0.113644;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.3:20008960 chr03:020008960 0 W/20008960-20008960 FN723-S Single Base Substitution A-G INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN3430-S.SNP.3:20010236 chr03:020010236 0 W/20010236-20010236 FN3430-S SNP G -> T AC=1;AN=184;BQB=0.357276;DP=3089;DP4=1683,1300,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00194238;MQB=2.67275e-06;MQSB=0.849128;RPB=0.879884;SGB=5.28054;VDB=0.82696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.3:20011166 chr03:020011166 0 W/20011166-20011166 FN2709-S SNP T -> A AC=2;AN=200;BQB=0.999978;DP=5187;DP4=2589,2372,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.93972e-24;MQSB=0.786072;RPB=0.964217;SGB=92.009;VDB=0.194073;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.3:20012936 chr03:020012936 0 W/20012936-20012936 FN-379 Single Base Substitution C-T INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1406-S.SNP.3:20024076 chr03:020024076 0 W/20024076-20024076 FN1406-S Single Base Substitution C-T INTERGENIC Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN758-S.SNP.3:20033433 chr03:020033433 0 W/20033433-20033433 FN758-S Single Base Substitution C-T INTRON HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2646-S.SNP.3:20034556 chr03:020034556 0 W/20034556-20034556 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.954344;DP=5311;DP4=2406,2655,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35596e-15;MQSB=0.999584;RPB=0.62225;SGB=76.3213;VDB=0.67609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.3:20036888 chr03:020036888 0 W/20036888-20036888 FN1711-S SNP C -> T AC=2;AN=188;BQB=0.431669;DP=3098;DP4=1751,1272,13,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.75261e-17;MQSB=0.7297;RPB=0.360315;SGB=106.85;VDB=0.339464;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.3:20045588 chr03:020045588 0 W/20045588-20045588 FN679-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN_788-1-1.SNP.3:20047409 chr03:020047409 0 W/20047409-20047409 FN_788-1-1 Single Base Substitution G-A Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2597-S.SNP.3:20052203 chr03:020052203 0 W/20052203-20052203 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.598755;DP=4241;DP4=1956,2034,17,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.26543e-11;MQSB=0.760666;RPB=0.298667;SGB=95.5;VDB=0.854667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.3:20053642 chr03:020053642 0 W/20053642-20053642 FN1383-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g36150 retrotransposon protein, putative, unclassified, expressed SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN-83.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN-83 Single Base Substitution C-T INTRON HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1488-S.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN1488-S Single Base Substitution C-T INTRON Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1585-S.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN1585-S Single Base Substitution C-T INTRON Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3856-S.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.792265;DP=2745;DP4=1419,1244,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.85935e-07;MQSB=0.829885;RPB=0.205723;SGB=16.7104;VDB=0.58469;EFF=INTRON(MODIFIER||||281|LOC_Os03g36150|protein_coding|CODING|LOC_Os03g36150.1|4|1) FN4151-S.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN4151-S SNP C -> T AC=2;AN=170;BQB=0.885497;DP=2674;DP4=1318,1253,24,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.75489e-21;MQSB=0.996844;RPB=0.790591;SGB=80.9502;VDB=0.428428;EFF=INTRON(MODIFIER||||281|LOC_Os03g36150|protein_coding|CODING|LOC_Os03g36150.1|4|1) FN989-S.SNP.3:20053998 chr03:020053998 0 W/20053998-20053998 FN989-S Single Base Substitution C-T INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN695-S.SNP.3:20054016 chr03:020054016 0 W/20054016-20054016 FN695-S Single Base Substitution G-A INTRON HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2412.SNP.3:20055353 chr03:020055353 0 W/20055353-20055353 FN2412 SNP G -> T AC=2;AN=200;BQB=0.195296;DP=3470;DP4=1723,1156,16,8;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00115274;MQB=1.63313e-07;MQSB=0.383875;RPB=0.470907;SGB=19.1209;VDB=0.932704;EFF=INTRON(MODIFIER||||281|LOC_Os03g36150|protein_coding|CODING|LOC_Os03g36150.1|4|1) FN2083-S.SNP.3:20055372 chr03:020055372 0 W/20055372-20055372 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.151016;DP=2026;DP4=1036,905,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.27254e-05;MQSB=0.741277;RPB=0.926917;SGB=-16.2342;VDB=0.491868;EFF=INTRON(MODIFIER||||281|LOC_Os03g36150|protein_coding|CODING|LOC_Os03g36150.1|4|1) FN1064-S.SNP.3:20069904 chr03:020069904 0 W/20069904-20069904 FN1064-S Single Base Substitution A-G INTRON HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN476-S.SNP.3:20073247 chr03:020073247 0 W/20073247-20073247 FN476-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g36180 retrotransposon protein, putative, unclassified, expressed SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-109.SNP.3:20075873 chr03:020075873 0 W/20075873-20075873 FN-109 Single Base Substitution A-G INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN2404.SNP.3:20077461 chr03:020077461 0 W/20077461-20077461 FN2404 SNP G -> T AC=2;AN=200;BQB=0.064738;DP=5191;DP4=2272,2572,33,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.27061e-39;MQSB=0.783849;RPB=0.982828;SGB=238.554;VDB=0.200638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.3:20083292 chr03:020083292 0 W/20083292-20083292 FN2580-S SNP G -> T AC=1;AN=198;BQB=0.930652;DP=4292;DP4=2231,1726,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.04613e-10;MQSB=0.996283;RPB=0.592062;SGB=60.4858;VDB=0.274441;EFF=INTRON(MODIFIER||||244|LOC_Os03g36200|protein_coding|CODING|LOC_Os03g36200.1|1|1) FN3404-S.SNP.3:20084329 chr03:020084329 0 W/20084329-20084329 FN3404-S SNP G -> A AC=1;AN=184;BQB=0.743121;DP=2562;DP4=1191,1319,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21466e-05;MQSB=0.991601;RPB=0.953773;SGB=25.1826;VDB=0.230965;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.3:20088799 chr03:020088799 0 W/20088799-20088799 FN849-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g36220 retrotransposon protein, putative, unclassified, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN681-S.SNP.3:20089333 chr03:020089333 0 W/20089333-20089333 FN681-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os03g36220 retrotransposon protein, putative, unclassified, expressed SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN4120-S.SNP.3:20091381 chr03:020091381 0 W/20091381-20091381 FN4120-S SNP C -> G AC=1;AN=182;BQB=0.995843;DP=3177;DP4=1447,1643,9,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.52097e-14;MQSB=0.993967;RPB=0.654406;SGB=102.753;VDB=0.480074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R317P|1269|LOC_Os03g36220|protein_coding|CODING|LOC_Os03g36220.1|4|1) FN1636-S.SNP.3:20092480 chr03:020092480 0 W/20092480-20092480 FN1636-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g36220 retrotransposon protein, putative, unclassified, expressed SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1687-S.SNP.3:20098964 chr03:020098964 0 W/20098964-20098964 FN1687-S SNP G -> A AC=1;AN=188;BQB=0.998206;DP=3404;DP4=1549,1819,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0176263;MQB=1.90996e-07;MQSB=0.203187;RPB=0.860116;SGB=46.4225;VDB=0.0562849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S2329L|2985|LOC_Os03g36239|protein_coding|CODING|LOC_Os03g36239.1|5|1) FN3576-S.SNP.3:20099067 chr03:020099067 0 W/20099067-20099067 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.803267;DP=2815;DP4=1440,1309,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00035524;MQB=7.21572e-12;MQSB=0.999614;RPB=0.867172;SGB=46.4225;VDB=0.727505;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L2295|2985|LOC_Os03g36239|protein_coding|CODING|LOC_Os03g36239.1|5|1) FN3576-S.SNP.3:20099068 chr03:020099068 0 W/20099068-20099068 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.972931;DP=2796;DP4=1416,1291,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000357654;MQB=5.00293e-13;MQSB=0.999458;RPB=0.839879;SGB=46.4225;VDB=0.827593;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A2294|2985|LOC_Os03g36239|protein_coding|CODING|LOC_Os03g36239.1|5|1) FN3357-S.SNP.3:20100648 chr03:020100648 0 W/20100648-20100648 FN3357-S SNP C -> T AC=1;AN=184;BQB=0.890816;DP=3274;DP4=1534,1638,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000305437;MQB=4.06657e-08;MQSB=0.805929;RPB=0.786241;SGB=46.3132;VDB=0.204202;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1811R|2985|LOC_Os03g36239|protein_coding|CODING|LOC_Os03g36239.1|4|1) FN3945-S.SNP.3:20109425 chr03:020109425 0 W/20109425-20109425 FN3945-S SNP A -> G AC=2;AN=168;BQB=0.915413;DP=2178;DP4=918,1139,10,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.18297e-10;MQSB=0.952117;RPB=0.927835;SGB=92.0501;VDB=0.0509003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.3:20110620 chr03:020110620 0 W/20110620-20110620 FN3653-S SNP T -> G AC=1;AN=190;BQB=0.81308;DP=2059;DP4=495,1399,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000222882;MQSB=0.906045;RPB=0.341306;SGB=10.8904;VDB=0.26517;EFF=INTRON(MODIFIER||||169|LOC_Os03g36260|protein_coding|CODING|LOC_Os03g36260.1|1|1) FN347-S.SNP.3:20111963 chr03:020111963 0 W/20111963-20111963 FN347-S Single Base Substitution G-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN-155.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN-155 Single Base Substitution T-C INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-23.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN-23 Single Base Substitution T-C INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-69.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN-69 Single Base Substitution T-C INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2254-S.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN2254-S SNP T -> C AC=2;AN=190;BQB=0.99631;DP=4969;DP4=2227,2454,17,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00281747;MQB=8.64592e-18;MQSB=3.96199e-06;RPB=0.833644;SGB=114.286;VDB=0.93849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN2433 SNP T -> C AC=2;AN=200;BQB=0.884363;DP=5033;DP4=2271,2472,22,25;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00278164;MQB=7.25152e-25;MQSB=8.0201e-08;RPB=0.798462;SGB=210.84;VDB=0.780215;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.3:20113392 chr03:020113392 0 W/20113392-20113392 FN4071-S SNP T -> C AC=2;AN=182;BQB=0.898798;DP=2556;DP4=1100,1406,5,6;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0.00547731;MQB=7.69934e-06;MQSB=1.41068e-05;RPB=0.916474;SGB=44.1115;VDB=0.923075;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN-155 Single Base Substitution C-A INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-23.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN-23 Single Base Substitution C-A INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-69.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN-69 Single Base Substitution C-A INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2254-S.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN2254-S SNP C -> A AC=2;AN=190;BQB=0.968304;DP=4971;DP4=2211,2399,19,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0030175;MQB=2.25175e-17;MQSB=1.21922e-06;RPB=0.981739;SGB=-3.2522;VDB=0.908764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN2433 SNP C -> A AC=2;AN=200;BQB=0.989851;DP=5044;DP4=2231,2455,25,26;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00297383;MQB=4.29359e-26;MQSB=5.03295e-08;RPB=0.622005;SGB=62.4605;VDB=0.552516;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.3:20113393 chr03:020113393 0 W/20113393-20113393 FN4071-S SNP C -> A AC=2;AN=182;BQB=0.80052;DP=2558;DP4=1084,1412,8,7;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0.00586396;MQB=6.96159e-07;MQSB=3.17999e-05;RPB=0.793135;SGB=23.1441;VDB=0.76317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.3:20120264 chr03:020120264 0 W/20120264-20120264 FN3880-S SNP G -> A AC=1;AN=158;BQB=0.589758;DP=2407;DP4=1162,1127,12,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.53782e-14;MQSB=0.865676;RPB=0.870347;SGB=15.7806;VDB=0.639883;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.3:20125116 chr03:020125116 0 W/20125116-20125116 FN1212-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g36279 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1462-S.SNP.3:20125629 chr03:020125629 0 W/20125629-20125629 FN1462-S Single Base Substitution T-C INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN302-S.SNP.3:20126484 chr03:020126484 0 W/20126484-20126484 FN302-S Single Base Substitution T-A INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2575-S.SNP.3:20128970 chr03:020128970 0 W/20128970-20128970 FN2575-S SNP G -> A AC=2;AN=198;BQB=0.119986;DP=3734;DP4=1710,1781,35,41;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.38221e-44;MQSB=0.981093;RPB=0.706784;SGB=295.464;VDB=0.402248;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q963*|1120|LOC_Os03g36290|protein_coding|CODING|LOC_Os03g36290.1|7|1);LOF=(LOC_Os03g36290|LOC_Os03g36290|1|1.00);NMD=(LOC_Os03g36290|LOC_Os03g36290|1|1.00) FN804-S.SNP.3:20128985 chr03:020128985 0 W/20128985-20128985 FN804-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g36290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN804-S.SNP.3:20128987 chr03:020128987 0 W/20128987-20128987 FN804-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g36290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1320-S.SNP.3:20129686 chr03:020129686 0 W/20129686-20129686 FN1320-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g36290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2791-S.SNP.3:20132792 chr03:020132792 0 W/20132792-20132792 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.714795;DP=4216;DP4=1841,2146,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.47422e-13;MQSB=0.762283;RPB=0.987893;SGB=14.1348;VDB=0.349815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V231M|1120|LOC_Os03g36290|protein_coding|CODING|LOC_Os03g36290.1|2|1) FN4155-S.SNP.3:20135887 chr03:020135887 0 W/20135887-20135887 FN4155-S SNP G -> A AC=2;AN=170;BQB=0.960718;DP=2844;DP4=1396,1352,15,14;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.23674e-10;MQSB=0.255683;RPB=0.997588;SGB=123.397;VDB=0.593273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R202C|706|LOC_Os03g36300|protein_coding|CODING|LOC_Os03g36300.1|3|1) FN722-S.SNP.3:20136911 chr03:020136911 0 W/20136911-20136911 FN722-S Single Base Substitution C-T INTRON HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN-364.SNP.3:20141029 chr03:020141029 0 W/20141029-20141029 FN-364 Single Base Substitution C-T INTRON HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3651-S.SNP.3:20143741 chr03:020143741 0 W/20143741-20143741 FN3651-S SNP T -> G AC=1;AN=190;BQB=0.730294;DP=2679;DP4=1215,1173,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00111982;MQB=1.84985e-05;MQSB=0.554933;RPB=0.130315;SGB=-14.8836;VDB=0.854394;EFF=INTERGENIC(MODIFIER||||||||||1) FN-327.SNP.3:20145042 chr03:020145042 0 W/20145042-20145042 FN-327 Single Base Substitution G-T INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1318-S.SNP.3:20149374 chr03:020149374 0 W/20149374-20149374 FN1318-S Single Base Substitution G-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1318-S.SNP.3:20149375 chr03:020149375 0 W/20149375-20149375 FN1318-S Single Base Substitution A-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN757-S.SNP.3:20154683 chr03:020154683 0 W/20154683-20154683 FN757-S Single Base Substitution T-C INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3868-S.SNP.3:20155070 chr03:020155070 0 W/20155070-20155070 FN3868-S SNP A -> G AC=2;AN=158;BQB=0.749745;DP=2447;DP4=996,1376,8,3;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=0.000346848;MQSB=0.547862;RPB=0.994132;SGB=42.6978;VDB=0.398331;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.3:20158363 chr03:020158363 0 W/20158363-20158363 FN1048-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g36350 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3415-S.SNP.3:20164664 chr03:020164664 0 W/20164664-20164664 FN3415-S SNP G -> C AC=2;AN=184;BQB=0.975883;DP=2915;DP4=1389,1440,14,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.63444e-13;MQSB=0.999516;RPB=0.947278;SGB=84.9167;VDB=0.25676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.3:20164922 chr03:020164922 0 W/20164922-20164922 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.892035;DP=3062;DP4=1476,1440,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.72473e-06;MQSB=0.971181;RPB=0.703302;SGB=32.5467;VDB=0.678262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.3:20167538 chr03:020167538 0 W/20167538-20167538 FN2335 SNP G -> A AC=2;AN=192;BQB=0.710011;DP=4907;DP4=2384,2202,25,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.82683e-29;MQSB=0.710877;RPB=0.989529;SGB=182.354;VDB=0.0408114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M43I|400|LOC_Os03g36370|protein_coding|CODING|LOC_Os03g36370.1|2|1) FN3445-S.SNP.3:20168725 chr03:020168725 0 W/20168725-20168725 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.916726;DP=2976;DP4=1538,1333,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00589e-06;MQSB=0.969751;RPB=0.733361;SGB=25.1826;VDB=0.144519;EFF=INTRON(MODIFIER||||400|LOC_Os03g36370|protein_coding|CODING|LOC_Os03g36370.1|3|1) FN3916-S.SNP.3:20187127 chr03:020187127 0 W/20187127-20187127 FN3916-S SNP C -> A AC=2;AN=158;BQB=0.816056;DP=2348;DP4=1338,913,14,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.05114e-15;MQSB=0.632635;RPB=0.943924;SGB=99.5005;VDB=0.569047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R14S|99|LOC_Os03g36419|protein_coding|CODING|LOC_Os03g36419.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R14S|99|LOC_Os03g36419|protein_coding|CODING|LOC_Os03g36419.2|1|1) FN3916-S.SNP.3:20187128 chr03:020187128 0 W/20187128-20187128 FN3916-S SNP C -> T AC=2;AN=158;BQB=0.905225;DP=2343;DP4=1322,924,15,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.72026e-15;MQSB=0.531572;RPB=0.970689;SGB=67.7679;VDB=0.64613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R14K|99|LOC_Os03g36419|protein_coding|CODING|LOC_Os03g36419.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R14K|99|LOC_Os03g36419|protein_coding|CODING|LOC_Os03g36419.2|1|1) FN4109-S.SNP.3:20189375 chr03:020189375 0 W/20189375-20189375 FN4109-S SNP T -> A AC=1;AN=182;BQB=0.990923;DP=3085;DP4=1526,1453,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=4.85983e-06;MQSB=2.05331e-06;RPB=0.579588;SGB=42.6494;VDB=0.825434;EFF=INTRON(MODIFIER||||216|LOC_Os03g36439|protein_coding|CODING|LOC_Os03g36439.1|2|1) FN2677-S.SNP.3:20193367 chr03:020193367 0 W/20193367-20193367 FN2677-S SNP G -> C AC=1;AN=200;BQB=0.899051;DP=4502;DP4=2196,2072,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222124;MQB=8.88155e-09;MQSB=0.967284;RPB=0.193879;SGB=51.0851;VDB=0.680279;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.3:20197797 chr03:020197797 0 W/20197797-20197797 FN1064-S Single Base Substitution A-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN536-S.SNP.3:20200402 chr03:020200402 0 W/20200402-20200402 FN536-S Single Base Substitution G-A INTERGENIC HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.3:20200402 chr03:020200402 0 W/20200402-20200402 FN727-S Single Base Substitution G-A INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN2558-S.SNP.3:20201233 chr03:020201233 0 W/20201233-20201233 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.920433;DP=4022;DP4=1931,1888,17,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.21882e-22;MQSB=0.941975;RPB=0.938607;SGB=126.432;VDB=0.209411;EFF=INTERGENIC(MODIFIER||||||||||1) 702-2-1.SNP.3:20211060 chr03:020211060 0 W/20211060-20211060 702-2-1 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1444, Mutant_ID: 702-2-1, Generation: M2, Mutations: 28, Genes: 16, Seed availability: No. 702-4.SNP.3:20211060 chr03:020211060 0 W/20211060-20211060 702-4 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1445, Mutant_ID: 702-4, Generation: M2, Mutations: 27, Genes: 28, Seed availability: Yes. 702-5-1.SNP.3:20211060 chr03:020211060 0 W/20211060-20211060 702-5-1 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1446, Mutant_ID: 702-5-1, Generation: M2, Mutations: 28, Genes: 10, Seed availability: Yes. 702-6.SNP.3:20211060 chr03:020211060 0 W/20211060-20211060 702-6 Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1447, Mutant_ID: 702-6, Generation: M2, Mutations: 26, Genes: 20, Seed availability: Yes. FN988-S.SNP.3:20219668 chr03:020219668 0 W/20219668-20219668 FN988-S Single Base Substitution A-T INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2791-S.SNP.3:20230246 chr03:020230246 0 W/20230246-20230246 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.71724;DP=4216;DP4=2051,1914,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.50793e-17;MQSB=0.938352;RPB=0.581643;SGB=86.8856;VDB=0.10155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.3:20234888 chr03:020234888 0 W/20234888-20234888 FN3424-S SNP G -> T AC=1;AN=184;BQB=0.566652;DP=2922;DP4=1353,1475,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00239293;MQSB=0.989297;RPB=0.99998;SGB=30.6558;VDB=0.659709;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.3:20236156 chr03:020236156 0 W/20236156-20236156 FN-191 Single Base Substitution T-A INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1371-S.SNP.3:20236885 chr03:020236885 0 W/20236885-20236885 FN1371-S Single Base Substitution T-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN391-S.SNP.3:20256583 chr03:020256583 0 W/20256583-20256583 FN391-S Single Base Substitution G-A INTRON HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3389-S.SNP.3:20265407 chr03:020265407 0 W/20265407-20265407 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.996283;DP=3281;DP4=1417,1721,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.75156e-14;MQSB=0.895966;RPB=0.708084;SGB=74.4875;VDB=0.502632;EFF=INTRON(MODIFIER||||348|LOC_Os03g36560|protein_coding|CODING|LOC_Os03g36560.1|2|1) FN1427-S.SNP.3:20269792 chr03:020269792 0 W/20269792-20269792 FN1427-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN622-S.SNP.3:20273130 chr03:020273130 0 W/20273130-20273130 FN622-S Single Base Substitution C-T INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-79.SNP.3:20276847 chr03:020276847 0 W/20276847-20276847 FN-79 Single Base Substitution G-A INTRON HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN679-S.SNP.3:20278590 chr03:020278590 0 W/20278590-20278590 FN679-S Single Base Substitution C-A INTRON HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN772-S.SNP.3:20284674 chr03:020284674 0 W/20284674-20284674 FN772-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g36580 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3323-S.SNP.3:20288447 chr03:020288447 0 W/20288447-20288447 FN3323-S SNP A -> T AC=1;AN=184;BQB=0.209016;DP=2924;DP4=1260,1532,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98046e-05;MQSB=0.504861;RPB=0.979319;SGB=3.75875;VDB=0.61371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2104-S.SNP.3:20289312 chr03:020289312 0 W/20289312-20289312 FN2104-S SNP G -> A AC=1;AN=168;BQB=0.000190817;DP=4004;DP4=2099,1862,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000393944;MQSB=0.9347;RPB=0.248656;SGB=-268.611;VDB=0.921971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G2R|357|LOC_Os03g36590|protein_coding|CODING|LOC_Os03g36590.1|2|1) FN-85.SNP.3:20289323 chr03:020289323 0 W/20289323-20289323 FN-85 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g36590 retrotransposon protein, putative, unclassified, expressed SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN4044-S.SNP.3:20293576 chr03:020293576 0 W/20293576-20293576 FN4044-S SNP C -> T AC=1;AN=168;BQB=0.957699;DP=2299;DP4=1186,1026,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.62448e-05;MQSB=0.998736;RPB=0.142442;SGB=7.59999;VDB=0.298589;EFF=INTRON(MODIFIER||||1113|LOC_Os03g36600|protein_coding|CODING|LOC_Os03g36600.1|3|1) FN-67.SNP.3:20294139 chr03:020294139 0 W/20294139-20294139 FN-67 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g36600 retrotransposon protein, putative, unclassified, expressed SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN3848-S.SNP.3:20297558 chr03:020297558 0 W/20297558-20297558 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.997356;DP=2810;DP4=1393,1300,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.77049e-08;MQSB=0.693772;RPB=0.547683;SGB=64.5449;VDB=0.776002;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.3:20299332 chr03:020299332 0 W/20299332-20299332 FN-169 Single Base Substitution T-C INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2734-S.SNP.3:20304634 chr03:020304634 0 W/20304634-20304634 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.657438;DP=4624;DP4=2161,2222,20,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29794e-17;MQSB=0.999992;RPB=0.624785;SGB=101.557;VDB=0.363686;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L245F|535|LOC_Os03g36620|protein_coding|CODING|LOC_Os03g36620.1|2|1) FN1633-S.SNP.3:20308688 chr03:020308688 0 W/20308688-20308688 FN1633-S Single Base Substitution C-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN4272-S.SNP.3:20317530 chr03:020317530 0 W/20317530-20317530 FN4272-S SNP C -> A AC=2;AN=170;BQB=0.944389;DP=2465;DP4=1202,1144,20,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.06439e-25;MQSB=0.96604;RPB=0.283208;SGB=176.709;VDB=0.219741;EFF=INTRON(MODIFIER||||143|LOC_Os03g36630|protein_coding|CODING|LOC_Os03g36630.1|2|1) FN4272-S.SNP.3:20317531 chr03:020317531 0 W/20317531-20317531 FN4272-S SNP T -> C AC=2;AN=170;BQB=0.966029;DP=2465;DP4=1183,1156,19,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.75884e-26;MQSB=0.991113;RPB=0.142447;SGB=150.383;VDB=0.229819;EFF=INTRON(MODIFIER||||143|LOC_Os03g36630|protein_coding|CODING|LOC_Os03g36630.1|2|1) FN4208-S.SNP.3:20321515 chr03:020321515 0 W/20321515-20321515 FN4208-S SNP C -> T AC=1;AN=170;BQB=0.681565;DP=1786;DP4=1061,678,1,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00078764;MQSB=0.772465;RPB=0.894555;SGB=34.5445;VDB=0.611431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A29V|272|LOC_Os03g36640|protein_coding|CODING|LOC_Os03g36640.1|1|1) FN895-S.SNP.3:20322982 chr03:020322982 0 W/20322982-20322982 FN895-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g36640 expressed protein SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3768-S.SNP.3:20324813 chr03:020324813 0 W/20324813-20324813 FN3768-S SNP A -> T AC=1;AN=190;BQB=0.666696;DP=2836;DP4=1174,1546,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30824e-07;MQSB=0.871748;RPB=0.969513;SGB=26.2136;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.3:20337852 chr03:020337852 0 W/20337852-20337852 FN2739-S SNP G -> C AC=1;AN=200;BQB=0.207581;DP=6614;DP4=3583,2665,6,12;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0374962;MQB=0.605568;MQSB=4.44129e-09;RPB=0.979691;SGB=9.48993;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.3:20337898 chr03:020337898 0 W/20337898-20337898 FN3932-S SNP G -> C AC=1;AN=158;BQB=0.986136;DP=3953;DP4=1915,1872,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0283329;MQB=0.439183;MQSB=5.79007e-07;RPB=0.783034;SGB=2.08615;VDB=0.034745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.3:20337903 chr03:020337903 0 W/20337903-20337903 FN3789-S SNP T -> C AC=1;AN=190;BQB=0.986924;DP=4877;DP4=2264,2394,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0289112;MQB=0.320174;MQSB=0.0034542;RPB=0.403756;SGB=53.8699;VDB=0.514989;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.3:20349860 chr03:020349860 0 W/20349860-20349860 FN-176 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g36700 retrotransposon protein, putative, unclassified, expressed SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN3556-S.SNP.3:20350790 chr03:020350790 0 W/20350790-20350790 FN3556-S SNP C -> A AC=2;AN=188;BQB=0.483514;DP=2992;DP4=1388,1493,18,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.96164e-24;MQSB=0.97037;RPB=0.751605;SGB=153.536;VDB=0.622558;EFF=INTRON(MODIFIER||||601|LOC_Os03g36700|protein_coding|CODING|LOC_Os03g36700.1|3|1) FN3491-S.SNP.3:20351717 chr03:020351717 0 W/20351717-20351717 FN3491-S SNP C -> T AC=1;AN=188;BQB=0.922507;DP=3259;DP4=1526,1664,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.83794e-08;MQSB=0.716133;RPB=0.425921;SGB=53.5223;VDB=0.179577;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R181|601|LOC_Os03g36700|protein_coding|CODING|LOC_Os03g36700.1|2|1) FN-155.SNP.3:20352296 chr03:020352296 0 W/20352296-20352296 FN-155 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1475-S.SNP.3:20359367 chr03:020359367 0 W/20359367-20359367 FN1475-S Single Base Substitution C-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN533-S.SNP.3:20361761 chr03:020361761 0 W/20361761-20361761 FN533-S Single Base Substitution G-A INTRON HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN1734-S.SNP.3:20364070 chr03:020364070 0 W/20364070-20364070 FN1734-S SNP G -> A AC=1;AN=188;BQB=0.00309313;DP=3942;DP4=1818,2088,6,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000191743;MQSB=0.987164;RPB=0.532443;SGB=-148.887;VDB=0.757493;EFF=INTRON(MODIFIER||||336|LOC_Os03g36730|protein_coding|CODING|LOC_Os03g36730.1|1|1) FN2670-S.SNP.3:20374514 chr03:020374514 0 W/20374514-20374514 FN2670-S SNP A -> T AC=2;AN=200;BQB=0.287759;DP=5197;DP4=2331,2651,30,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000192419;MQB=6.61578e-31;MQSB=0.0669552;RPB=0.529999;SGB=247.682;VDB=0.191704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.3:20375951 chr03:020375951 0 W/20375951-20375951 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.923694;DP=2580;DP4=1077,1425,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29989e-09;MQSB=0.999473;RPB=0.879195;SGB=26.2136;VDB=0.868406;EFF=INTRON(MODIFIER||||61|LOC_Os03g36740|protein_coding|CODING|LOC_Os03g36740.1|1|1) FN3058-S.SNP.3:20376327 chr03:020376327 0 W/20376327-20376327 FN3058-S SNP G -> A AC=1;AN=184;BQB=0.457687;DP=2704;DP4=1449,1141,16,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.77622e-10;MQSB=0.962809;RPB=0.812395;SGB=74.4875;VDB=0.612977;EFF=INTRON(MODIFIER||||61|LOC_Os03g36740|protein_coding|CODING|LOC_Os03g36740.1|1|1) FN-332.SNP.3:20383233 chr03:020383233 0 W/20383233-20383233 FN-332 Single Base Substitution A-G INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3575-S.SNP.3:20383401 chr03:020383401 0 W/20383401-20383401 FN3575-S SNP T -> A AC=2;AN=188;BQB=0.988415;DP=2698;DP4=1276,1341,9,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.04343e-15;MQSB=0.970511;RPB=0.442185;SGB=108.042;VDB=0.509424;EFF=INTRON(MODIFIER||||320|LOC_Os03g36750|protein_coding|CODING|LOC_Os03g36750.1|4|1) FN2634-S.SNP.3:20393500 chr03:020393500 0 W/20393500-20393500 FN2634-S SNP G -> A AC=1;AN=200;BQB=0.782379;DP=5282;DP4=2410,2511,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000189322;MQB=1.00757e-06;MQSB=0.0894495;RPB=0.872538;SGB=36.6644;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S571N|1030|LOC_Os03g36760|protein_coding|CODING|LOC_Os03g36760.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S571N|1030|LOC_Os03g36760|protein_coding|CODING|LOC_Os03g36760.2|1|1) FN3738-S.SNP.3:20399142 chr03:020399142 0 W/20399142-20399142 FN3738-S SNP A -> T AC=1;AN=190;BQB=0.884147;DP=3252;DP4=1573,1542,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3807e-11;MQSB=0.943261;RPB=0.483099;SGB=31.3213;VDB=0.27561;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.3:20403345 chr03:020403345 0 W/20403345-20403345 FN-262 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g36780 elongation factor, putative, expressed SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-193.SNP.3:20420280 chr03:020420280 0 W/20420280-20420280 FN-193 Single Base Substitution A-G INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2655-S.SNP.3:20430834 chr03:020430834 0 W/20430834-20430834 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.480028;DP=4944;DP4=2374,2246,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01475e-19;MQSB=0.987379;RPB=0.786511;SGB=-40.8432;VDB=0.296121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.3:20439279 chr03:020439279 0 W/20439279-20439279 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.651667;DP=1777;DP4=1181,513,13,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.20996e-06;MQSB=0.706376;RPB=0.959959;SGB=62.3078;VDB=0.867662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1681-S.SNP.3:20440096 chr03:020440096 0 W/20440096-20440096 FN1681-S SNP C -> T AC=2;AN=188;BQB=0.206796;DP=3744;DP4=1771,1915,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.21222e-17;MQSB=0.181147;RPB=0.323625;SGB=-44.6718;VDB=0.732243;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.3:20440412 chr03:020440412 0 W/20440412-20440412 FN-283 Single Base Substitution C-T INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1240-S.SNP.3:20447280 chr03:020447280 0 W/20447280-20447280 FN1240-S Single Base Substitution G-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2572-S.SNP.3:20448565 chr03:020448565 0 W/20448565-20448565 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.580493;DP=3533;DP4=1551,1800,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.58463e-15;MQSB=0.806364;RPB=0.998263;SGB=104.69;VDB=0.40026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.3:20454272 chr03:020454272 0 W/20454272-20454272 FN1543-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g36860 retrotransposon protein, putative, unclassified, expressed SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN-298.SNP.3:20454514 chr03:020454514 0 W/20454514-20454514 FN-298 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3506-S.SNP.3:20455260 chr03:020455260 0 W/20455260-20455260 FN3506-S SNP G -> A AC=2;AN=188;BQB=0.862097;DP=3451;DP4=1616,1742,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000289771;MQB=8.98126e-13;MQSB=0.00566612;RPB=0.806883;SGB=59.139;VDB=0.0895324;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V578|627|LOC_Os03g36860|protein_coding|CODING|LOC_Os03g36860.1|4|1) FN1344-S.SNP.3:20455478 chr03:020455478 0 W/20455478-20455478 FN1344-S Single Base Substitution C-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1517-S.SNP.3:20463986 chr03:020463986 0 W/20463986-20463986 FN1517-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN622-S.SNP.3:20464438 chr03:020464438 0 W/20464438-20464438 FN622-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN4111-S.SNP.3:20467536 chr03:020467536 0 W/20467536-20467536 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.816262;DP=3234;DP4=1614,1531,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.31049e-06;MQSB=0.791739;RPB=0.515446;SGB=53.1331;VDB=0.256906;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R577W|879|LOC_Os03g36890|protein_coding|CODING|LOC_Os03g36890.1|5|1) FN-279.SNP.3:20468485 chr03:020468485 0 W/20468485-20468485 FN-279 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g36890 retrotransposon protein, putative, unclassified, expressed SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4183-S.SNP.3:20472741 chr03:020472741 0 W/20472741-20472741 FN4183-S SNP T -> A AC=1;AN=170;BQB=0.990738;DP=2186;DP4=955,1173,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.29302e-06;MQSB=0.529498;RPB=0.382345;SGB=34.5445;VDB=0.136639;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.3:20479143 chr03:020479143 0 W/20479143-20479143 FN700-S Single Base Substitution A-T INTRON HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1559-S.SNP.3:20481567 chr03:020481567 0 W/20481567-20481567 FN1559-S Single Base Substitution G-T INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2113-S.SNP.3:20485663 chr03:020485663 0 W/20485663-20485663 FN2113-S SNP T -> A AC=1;AN=168;BQB=0.213312;DP=3389;DP4=2268,1081,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.65692e-07;MQSB=0.997193;RPB=0.849832;SGB=7.05233;VDB=0.731517;EFF=INTRON(MODIFIER||||325|LOC_Os03g36910|protein_coding|CODING|LOC_Os03g36910.1|1|1) FN3765-S.SNP.3:20490052 chr03:020490052 0 W/20490052-20490052 FN3765-S SNP G -> C AC=1;AN=190;BQB=0.714753;DP=2633;DP4=1260,1260,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62428e-12;MQSB=0.95562;RPB=0.51224;SGB=85.8548;VDB=0.383981;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A395G|1090|LOC_Os03g36920|protein_coding|CODING|LOC_Os03g36920.1|1|1) FN2676-S.SNP.3:20505758 chr03:020505758 0 W/20505758-20505758 FN2676-S SNP C -> G AC=1;AN=200;BQB=0.994802;DP=5017;DP4=2430,2353,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.9701e-08;MQSB=0.988004;RPB=0.267799;SGB=1.46408;VDB=0.108308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.3:20510184 chr03:020510184 0 W/20510184-20510184 FN1531-S Single Base Substitution G-A INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2192-S.SNP.3:20510641 chr03:020510641 0 W/20510641-20510641 FN2192-S SNP T -> A AC=1;AN=190;BQB=0.0418716;DP=5209;DP4=2321,2287,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.04683e-07;MQSB=0.890327;RPB=0.998284;SGB=-86.3139;VDB=0.450479;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.3:20519550 chr03:020519550 0 W/20519550-20519550 FN3467-S SNP G -> A AC=2;AN=184;BQB=0.523648;DP=3240;DP4=1710,1376,14,30;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.78478e-20;MQSB=0.928271;RPB=0.650085;SGB=96.407;VDB=0.314306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.3:20534642 chr03:020534642 0 W/20534642-20534642 FN1102-S Single Base Substitution G-A INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3302-S.SNP.3:20544935 chr03:020544935 0 W/20544935-20544935 FN3302-S SNP T -> C AC=1;AN=184;BQB=0.974157;DP=2408;DP4=1074,1245,2,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.04095e-05;MQSB=0.801169;RPB=0.57467;SGB=26.1347;VDB=0.332011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.3:20546247 chr03:020546247 0 W/20546247-20546247 FN-119 Single Base Substitution G-T INTRON HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2415.SNP.3:20548271 chr03:020548271 0 W/20548271-20548271 FN2415 SNP G -> A AC=1;AN=200;BQB=0.995188;DP=4567;DP4=2338,1977,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54748e-11;MQSB=0.796431;RPB=0.047555;SGB=51.0851;VDB=0.22682;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.3:20549523 chr03:020549523 0 W/20549523-20549523 FN924-S Single Base Substitution A-T INTRON HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3439-S.SNP.3:20549579 chr03:020549579 0 W/20549579-20549579 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.971377;DP=2778;DP4=1415,1315,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.26909e-08;MQSB=0.991668;RPB=0.943358;SGB=15.7097;VDB=0.691426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E126K|368|LOC_Os03g37060|protein_coding|CODING|LOC_Os03g37060.1|2|1) FN-127.SNP.3:20551353 chr03:020551353 0 W/20551353-20551353 FN-127 Single Base Substitution A-T INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2725-S.SNP.3:20556672 chr03:020556672 0 W/20556672-20556672 FN2725-S SNP A -> T AC=1;AN=200;BQB=0.291518;DP=5012;DP4=2336,2453,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.63892e-07;MQSB=0.872331;RPB=0.930891;SGB=26.8797;VDB=0.940417;EFF=INTRON(MODIFIER||||449|LOC_Os03g37080|protein_coding|CODING|LOC_Os03g37080.1|4|1) FN3546-S.SNP.3:20561861 chr03:020561861 0 W/20561861-20561861 FN3546-S SNP T -> C AC=2;AN=188;BQB=0.976083;DP=3226;DP4=1512,1559,16,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000309981;MQB=3.14025e-12;MQSB=0.336298;RPB=0.403971;SGB=112.585;VDB=0.108502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.3:20562534 chr03:020562534 0 W/20562534-20562534 FN1027-S Single Base Substitution C-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN-8.SNP.3:20562723 chr03:020562723 0 W/20562723-20562723 FN-8 Single Base Substitution T-G INTERGENIC Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN2657-S.SNP.3:20569314 chr03:020569314 0 W/20569314-20569314 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.857301;DP=4478;DP4=2153,2068,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.99557e-17;MQSB=0.574823;RPB=0.398411;SGB=150.973;VDB=0.868262;EFF=UTR_5_PRIME(MODIFIER||279||675|LOC_Os03g37120|protein_coding|CODING|LOC_Os03g37120.1|1|1) FN-181.SNP.3:20575485 chr03:020575485 0 W/20575485-20575485 FN-181 Single Base Substitution T-C INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3436-S.SNP.3:20575579 chr03:020575579 0 W/20575579-20575579 FN3436-S SNP T -> C AC=1;AN=184;BQB=0.879033;DP=2859;DP4=1275,1464,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.01218e-12;MQSB=0.874222;RPB=0.974451;SGB=43.4494;VDB=0.488304;EFF=INTRON(MODIFIER||||470|LOC_Os03g37130|protein_coding|CODING|LOC_Os03g37130.1|2|1) FN516-S.SNP.3:20598633 chr03:020598633 0 W/20598633-20598633 FN516-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g37180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN2390.SNP.3:20602323 chr03:020602323 0 W/20602323-20602323 FN2390 SNP G -> A AC=1;AN=200;BQB=0.882766;DP=4405;DP4=2011,2080,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00823e-09;MQSB=0.9862;RPB=0.999984;SGB=72.6852;VDB=0.454874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1511V|1767|LOC_Os03g37194|protein_coding|CODING|LOC_Os03g37194.1|11|1) FN2285.SNP.3:20604446 chr03:020604446 0 W/20604446-20604446 FN2285 SNP T -> C AC=2;AN=192;BQB=0.899954;DP=4710;DP4=2147,2022,19,21;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=1.01919e-18;MQSB=0.999759;RPB=0.436737;SGB=43.3348;VDB=0.465479;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G989|1767|LOC_Os03g37194|protein_coding|CODING|LOC_Os03g37194.1|7|1) FN756-S.SNP.3:20608886 chr03:020608886 0 W/20608886-20608886 FN756-S Single Base Substitution A-G INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2676-S.SNP.3:20613117 chr03:020613117 0 W/20613117-20613117 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.949393;DP=4821;DP4=2179,2378,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41468e-10;MQSB=0.995104;RPB=0.465752;SGB=47.4799;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.3:20614582 chr03:020614582 0 W/20614582-20614582 FN721-S Single Base Substitution A-T INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN4203-S.SNP.3:20617520 chr03:020617520 0 W/20617520-20617520 FN4203-S SNP G -> A AC=1;AN=170;BQB=0.856584;DP=2259;DP4=912,1199,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.58153e-08;MQSB=0.716593;RPB=0.475653;SGB=78.9707;VDB=0.455559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.3:20624583 chr03:020624583 0 W/20624583-20624583 FN1282-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN588-S.SNP.3:20628684 chr03:020628684 0 W/20628684-20628684 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2788-S.SNP.3:20634471 chr03:020634471 0 W/20634471-20634471 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.820985;DP=4183;DP4=1968,1916,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.57775e-16;MQSB=0.976775;RPB=0.740059;SGB=127.666;VDB=0.257753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.3:20636239 chr03:020636239 0 W/20636239-20636239 FN1582-S Single Base Substitution T-C INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN2457.SNP.3:20637939 chr03:020637939 0 W/20637939-20637939 FN2457 SNP T -> C AC=1;AN=200;BQB=0.932401;DP=5413;DP4=2573,2453,13,16;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0572695;MQB=0.652186;MQSB=0.995353;RPB=0.99401;SGB=27.1468;VDB=0.623954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.3:20640224 chr03:020640224 0 W/20640224-20640224 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.903897;DP=2769;DP4=1299,1375,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.41664e-09;MQSB=0.998869;RPB=0.67633;SGB=58.2031;VDB=0.242693;EFF=INTRON(MODIFIER||||747|LOC_Os03g37240|protein_coding|CODING|LOC_Os03g37240.1|4|1) FN3566-S.SNP.3:20650887 chr03:020650887 0 W/20650887-20650887 FN3566-S SNP A -> G AC=1;AN=188;BQB=0.285847;DP=3744;DP4=1359,2090,3,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.44945e-10;MQSB=0.903374;RPB=0.0134772;SGB=-93.8106;VDB=0.00621813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N189S|644|LOC_Os03g37260|protein_coding|CODING|LOC_Os03g37260.1|1|1) FN3976-S.SNP.3:20656699 chr03:020656699 0 W/20656699-20656699 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.987043;DP=2529;DP4=1120,1296,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.97959e-06;MQSB=0.998703;RPB=0.740372;SGB=43.3113;VDB=0.161751;EFF=INTRON(MODIFIER||||406|LOC_Os03g37270|protein_coding|CODING|LOC_Os03g37270.1|2|1) FN1261-S.SNP.3:20658890 chr03:020658890 0 W/20658890-20658890 FN1261-S Single Base Substitution C-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-96.SNP.3:20660075 chr03:020660075 0 W/20660075-20660075 FN-96 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g37270 RNA recognition motif containing protein, putative, expressed SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN-181.SNP.3:20661411 chr03:020661411 0 W/20661411-20661411 FN-181 Single Base Substitution C-T INTERGENIC HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1718-S.SNP.3:20667375 chr03:020667375 0 W/20667375-20667375 FN1718-S SNP A -> T AC=2;AN=188;BQB=0.999388;DP=3941;DP4=1792,2083,31,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.6421e-29;MQSB=0.985598;RPB=0.978022;SGB=167.086;VDB=0.318672;EFF=INTRON(MODIFIER||||547|LOC_Os03g37290|protein_coding|CODING|LOC_Os03g37290.1|1|1) FN3930-S.SNP.3:20676808 chr03:020676808 0 W/20676808-20676808 FN3930-S SNP C -> T AC=1;AN=158;BQB=0.979942;DP=3018;DP4=1287,1581,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04651e-09;MQSB=0.997384;RPB=0.760457;SGB=77.6532;VDB=0.250223;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.3:20680860 chr03:020680860 0 W/20680860-20680860 FN591-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN3431-S.SNP.3:20697221 chr03:020697221 0 W/20697221-20697221 FN3431-S SNP A -> T AC=2;AN=184;BQB=0.937283;DP=2460;DP4=1045,1331,9,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.38768e-12;MQSB=0.912347;RPB=0.941283;SGB=63.9222;VDB=0.737196;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.3:20702437 chr03:020702437 0 W/20702437-20702437 FN772-S Single Base Substitution T-C INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2430.SNP.3:20705867 chr03:020705867 0 W/20705867-20705867 FN2430 SNP C -> A AC=1;AN=200;BQB=0.454092;DP=4973;DP4=2318,2356,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.3592e-14;MQSB=0.966283;RPB=0.34259;SGB=-9.47921;VDB=0.371419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.3:20712719 chr03:020712719 0 W/20712719-20712719 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.932989;DP=2611;DP4=1230,1263,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.05636e-07;MQSB=0.99912;RPB=0.825388;SGB=24.4556;VDB=0.525878;EFF=INTRON(MODIFIER||||368|LOC_Os03g37377|protein_coding|CODING|LOC_Os03g37377.1|1|1) FN2430.SNP.3:20713411 chr03:020713411 0 W/20713411-20713411 FN2430 SNP A -> C AC=1;AN=200;BQB=0.973503;DP=4944;DP4=2362,2346,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000202265;MQB=3.54728e-17;MQSB=0.92423;RPB=0.999165;SGB=118.737;VDB=0.705797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K153Q|368|LOC_Os03g37377|protein_coding|CODING|LOC_Os03g37377.1|2|1) FN2197-S.SNP.3:20722237 chr03:020722237 0 W/20722237-20722237 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.967259;DP=4819;DP4=2511,2076,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207512;MQB=1.5614e-07;MQSB=0.399551;RPB=0.959802;SGB=50.3161;VDB=0.375242;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L861|1239|LOC_Os03g37394|protein_coding|CODING|LOC_Os03g37394.1|3|1) FN1633-S.SNP.3:20723114 chr03:020723114 0 W/20723114-20723114 FN1633-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3507-S.SNP.3:20723272 chr03:020723272 0 W/20723272-20723272 FN3507-S SNP G -> T AC=2;AN=188;BQB=0.884874;DP=2902;DP4=1320,1465,16,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.26315e-18;MQSB=0.993184;RPB=0.2229;SGB=130.758;VDB=0.00420499;EFF=INTRON(MODIFIER||||1239|LOC_Os03g37394|protein_coding|CODING|LOC_Os03g37394.1|4|1) FN1388-S.SNP.3:20727057 chr03:020727057 0 W/20727057-20727057 FN1388-S Single Base Substitution T-A INTRON HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN-195.SNP.3:20747820 chr03:020747820 0 W/20747820-20747820 FN-195 Single Base Substitution G-T INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3955-S.SNP.3:20747905 chr03:020747905 0 W/20747905-20747905 FN3955-S SNP T -> A AC=1;AN=168;BQB=0.984328;DP=2604;DP4=1291,1108,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00888e-09;MQSB=0.971837;RPB=0.544742;SGB=38.1788;VDB=0.0207226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.3:20747906 chr03:020747906 0 W/20747906-20747906 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.860232;DP=2614;DP4=1321,1204,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.53478e-09;MQSB=0.932689;RPB=0.59365;SGB=38.1788;VDB=0.0322663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.3:20756714 chr03:020756714 0 W/20756714-20756714 FN3856-S SNP T -> C AC=1;AN=158;BQB=0.726078;DP=2230;DP4=1109,1028,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=3.66492e-05;MQSB=0.381905;RPB=0.424688;SGB=51.4366;VDB=0.375587;EFF=INTRON(MODIFIER||||683|LOC_Os03g37430|protein_coding|CODING|LOC_Os03g37430.1|6|1) FN1109-S.SNP.3:20763029 chr03:020763029 0 W/20763029-20763029 FN1109-S Single Base Substitution C-T INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN554-S.SNP.3:20763029 chr03:020763029 0 W/20763029-20763029 FN554-S Single Base Substitution C-T INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN_786-4-1.SNP.3:20763029 chr03:020763029 0 W/20763029-20763029 FN_786-4-1 Single Base Substitution C-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN_846-8-1.SNP.3:20765163 chr03:020765163 0 W/20765163-20765163 FN_846-8-1 Single Base Substitution C-A Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN3863-S.SNP.3:20771054 chr03:020771054 0 W/20771054-20771054 FN3863-S SNP T -> A AC=1;AN=158;BQB=0.335471;DP=2239;DP4=1030,1071,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.86066e-05;MQSB=0.781715;RPB=0.93072;SGB=19.0798;VDB=0.900119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.3:20779423 chr03:020779423 0 W/20779423-20779423 FN3916-S SNP G -> A AC=2;AN=158;BQB=0.955103;DP=2354;DP4=1200,1058,15,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.38725e-15;MQSB=0.81241;RPB=0.740736;SGB=121.348;VDB=0.240853;EFF=INTRON(MODIFIER||||350|LOC_Os03g37470|protein_coding|CODING|LOC_Os03g37470.1|1|1) FN1243-S.SNP.3:20784967 chr03:020784967 0 W/20784967-20784967 FN1243-S Single Base Substitution G-T INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2663-S.SNP.3:20785466 chr03:020785466 0 W/20785466-20785466 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.946453;DP=4693;DP4=2146,2311,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.78072e-07;MQSB=0.999046;RPB=0.913723;SGB=40.4492;VDB=0.896039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.3:20786702 chr03:020786702 0 W/20786702-20786702 FN1024-S Single Base Substitution C-T INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2417.SNP.3:20789722 chr03:020789722 0 W/20789722-20789722 FN2417 SNP G -> T AC=1;AN=200;BQB=0.924347;DP=4762;DP4=2255,2241,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.76997e-13;MQSB=0.99529;RPB=0.849511;SGB=50.3263;VDB=0.585877;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.3:20789917 chr03:020789917 0 W/20789917-20789917 FN854-S Single Base Substitution C-T INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN704-S.SNP.3:20791399 chr03:020791399 0 W/20791399-20791399 FN704-S Single Base Substitution C-T INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1075-S.SNP.3:20791469 chr03:020791469 0 W/20791469-20791469 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN451-S.SNP.3:20791654 chr03:020791654 0 W/20791654-20791654 FN451-S Single Base Substitution G-A INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2318.SNP.3:20792213 chr03:020792213 0 W/20792213-20792213 FN2318 SNP A -> G AC=2;AN=192;BQB=0.991398;DP=4683;DP4=2400,1940,25,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.33084e-26;MQSB=0.993644;RPB=0.503295;SGB=52.7209;VDB=0.460076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.3:20798423 chr03:020798423 0 W/20798423-20798423 FN-179 Single Base Substitution G-A INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-198.SNP.3:20805039 chr03:020805039 0 W/20805039-20805039 FN-198 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g37500 retrotransposon protein, putative, unclassified, expressed SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-191.SNP.3:20809467 chr03:020809467 0 W/20809467-20809467 FN-191 Single Base Substitution G-A INTRON HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3673-S.SNP.3:20820286 chr03:020820286 0 W/20820286-20820286 FN3673-S SNP G -> A AC=2;AN=190;BQB=0.992996;DP=2390;DP4=1243,1056,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.41083e-10;MQSB=0.99743;RPB=0.799067;SGB=85.5263;VDB=0.789377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.3:20825427 chr03:020825427 0 W/20825427-20825427 FN1015-S Single Base Substitution C-T INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3432-S.SNP.3:20826523 chr03:020826523 0 W/20826523-20826523 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.847721;DP=3035;DP4=1429,1535,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.76189e-10;MQSB=0.171085;RPB=0.956165;SGB=28.3187;VDB=0.225612;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.3:20828360 chr03:020828360 0 W/20828360-20828360 FN416-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1561-S.SNP.3:20832214 chr03:020832214 0 W/20832214-20832214 FN1561-S Single Base Substitution C-T INTRON Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1142-S.SNP.3:20833183 chr03:020833183 0 W/20833183-20833183 FN1142-S Single Base Substitution G-A INTRON HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1724-S.SNP.3:20835896 chr03:020835896 0 W/20835896-20835896 FN1724-S SNP C -> T AC=2;AN=188;BQB=0.341167;DP=3650;DP4=1882,1707,28,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.98323e-21;MQSB=0.988125;RPB=0.399077;SGB=-102.69;VDB=0.26426;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.3:20845672 chr03:020845672 0 W/20845672-20845672 FN1366-S Single Base Substitution C-T INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN817-S.SNP.3:20849919 chr03:020849919 0 W/20849919-20849919 FN817-S Single Base Substitution G-A INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN1067-S.SNP.3:20852952 chr03:020852952 0 W/20852952-20852952 FN1067-S Single Base Substitution G-A INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN988-S.SNP.3:20860137 chr03:020860137 0 W/20860137-20860137 FN988-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g37610 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN772-S.SNP.3:20860956 chr03:020860956 0 W/20860956-20860956 FN772-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN282-S.SNP.3:20862800 chr03:020862800 0 W/20862800-20862800 FN282-S Single Base Substitution G-A INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN411-S.SNP.3:20863105 chr03:020863105 0 W/20863105-20863105 FN411-S Single Base Substitution G-A INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3795-S.SNP.3:20866954 chr03:020866954 0 W/20866954-20866954 FN3795-S SNP G -> A AC=2;AN=190;BQB=0.861919;DP=2748;DP4=1357,1279,6,9;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0200146;MQB=0.137142;MQSB=0.882218;RPB=0.982058;SGB=43.2083;VDB=0.938577;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G734D|846|LOC_Os03g37630|protein_coding|CODING|LOC_Os03g37630.1|9|1) FN2323.SNP.3:20871784 chr03:020871784 0 W/20871784-20871784 FN2323 SNP G -> A AC=2;AN=192;BQB=0.321822;DP=4937;DP4=2495,2174,23,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.99771e-25;MQSB=0.999665;RPB=0.950073;SGB=105.844;VDB=0.395849;EFF=INTRON(MODIFIER||||500|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.1|1|1),INTRON(MODIFIER||||495|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.2|1|1) FN3795-S.SNP.3:20872668 chr03:020872668 0 W/20872668-20872668 FN3795-S SNP A -> T AC=2;AN=190;BQB=0.991386;DP=2639;DP4=1296,1211,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35543e-11;MQSB=0.853475;RPB=0.82278;SGB=60.9777;VDB=0.794284;EFF=INTRON(MODIFIER||||500|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.1|1|1),INTRON(MODIFIER||||495|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.2|1|1) FN1720-S.SNP.3:20875023 chr03:020875023 0 W/20875023-20875023 FN1720-S SNP A -> G AC=1;AN=188;BQB=0.907539;DP=3022;DP4=1146,1817,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.41216e-12;MQSB=0.83838;RPB=0.994223;SGB=38.7926;VDB=0.609344;EFF=INTRON(MODIFIER||||500|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.1|1|1),INTRON(MODIFIER||||495|LOC_Os03g37640|protein_coding|CODING|LOC_Os03g37640.2|1|1) FN1731-S.SNP.3:20877082 chr03:020877082 0 W/20877082-20877082 FN1731-S SNP T -> C AC=2;AN=188;BQB=0.992216;DP=3925;DP4=2091,1764,30,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.95369e-17;MQSB=0.700859;RPB=0.111765;SGB=94.7451;VDB=0.704346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.3:20887359 chr03:020887359 0 W/20887359-20887359 FN2167-S SNP A -> G AC=1;AN=168;BQB=0.000282463;DP=4311;DP4=2326,1935,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68974e-08;MQSB=0.988238;RPB=0.732252;SGB=-155.04;VDB=0.0845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.3:20890720 chr03:020890720 0 W/20890720-20890720 FN-219 Single Base Substitution C-T INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN962-S.SNP.3:20901257 chr03:020901257 0 W/20901257-20901257 FN962-S Single Base Substitution C-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4080-S.SNP.3:20902410 chr03:020902410 0 W/20902410-20902410 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.672262;DP=3045;DP4=1501,1478,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00164204;MQB=0.000358239;MQSB=0.985467;RPB=0.702511;SGB=39.6007;VDB=0.165106;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R57H|208|LOC_Os03g37690|protein_coding|CODING|LOC_Os03g37690.1|3|1) FN511-S.SNP.3:20903616 chr03:020903616 0 W/20903616-20903616 FN511-S Single Base Substitution G-A INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN239-S.SNP.3:20903739 chr03:020903739 0 W/20903739-20903739 FN239-S Single Base Substitution A-C INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN1657-S.SNP.3:20912052 chr03:020912052 0 W/20912052-20912052 FN1657-S Single Base Substitution T-C INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2577-S.SNP.3:20914379 chr03:020914379 0 W/20914379-20914379 FN2577-S SNP A -> G AC=1;AN=198;BQB=0.808234;DP=4339;DP4=2081,2034,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.03416e-11;MQSB=0.710874;RPB=0.750946;SGB=10.9445;VDB=0.514414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cCa|L1011P|1266|LOC_Os03g37720|protein_coding|CODING|LOC_Os03g37720.1|1|1) FN3950-S.SNP.3:20917016 chr03:020917016 0 W/20917016-20917016 FN3950-S SNP G -> A AC=2;AN=168;BQB=0.998505;DP=3000;DP4=1669,1179,34,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.50148e-28;MQSB=0.535562;RPB=0.781609;SGB=110.075;VDB=0.707876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P132L|1266|LOC_Os03g37720|protein_coding|CODING|LOC_Os03g37720.1|1|1) W426-1-1.SNP.3:20935277 chr03:020935277 0 W/20935277-20935277 W426-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1520-S.SNP.3:20936229 chr03:020936229 0 W/20936229-20936229 FN1520-S Single Base Substitution G-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1129-S.SNP.3:20939310 chr03:020939310 0 W/20939310-20939310 FN1129-S Single Base Substitution A-G INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN3815-S.SNP.3:20944062 chr03:020944062 0 W/20944062-20944062 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.405538;DP=2392;DP4=1088,1225,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.76243e-05;MQSB=0.953896;RPB=0.910316;SGB=-2.10437;VDB=0.97327;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.3:20947047 chr03:020947047 0 W/20947047-20947047 FN3983-S SNP C -> A AC=1;AN=168;BQB=0.994479;DP=3029;DP4=1306,1593,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27426e-06;MQSB=0.970987;RPB=0.993704;SGB=38.8805;VDB=0.77035;EFF=INTRON(MODIFIER||||300|LOC_Os03g37780|protein_coding|CODING|LOC_Os03g37780.1|1|1) FN1529-S.SNP.3:20963787 chr03:020963787 0 W/20963787-20963787 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1292-S.SNP.3:20965897 chr03:020965897 0 W/20965897-20965897 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1292-S.SNP.3:20965898 chr03:020965898 0 W/20965898-20965898 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1461-S.SNP.3:20966649 chr03:020966649 0 W/20966649-20966649 FN1461-S Single Base Substitution T-C INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-107.SNP.3:20972917 chr03:020972917 0 W/20972917-20972917 FN-107 Single Base Substitution G-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN511-S.SNP.3:20974203 chr03:020974203 0 W/20974203-20974203 FN511-S Single Base Substitution G-A INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-137.SNP.3:20975446 chr03:020975446 0 W/20975446-20975446 FN-137 Single Base Substitution C-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4153-S.SNP.3:20977391 chr03:020977391 0 W/20977391-20977391 FN4153-S SNP A -> G AC=2;AN=170;BQB=0.962995;DP=2091;DP4=1080,892,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.37081e-09;MQSB=0.921444;RPB=0.944877;SGB=70.0854;VDB=0.484396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.3:20986730 chr03:020986730 0 W/20986730-20986730 FN2467 SNP A -> G AC=1;AN=200;BQB=0.664602;DP=4734;DP4=1891,2576,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.69915e-08;MQSB=0.815286;RPB=0.937021;SGB=47.4799;VDB=0.817527;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.3:20995448 chr03:020995448 0 W/20995448-20995448 FN1280-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2724-S.SNP.3:20998327 chr03:020998327 0 W/20998327-20998327 FN2724-S SNP T -> A AC=2;AN=200;BQB=0.420656;DP=5139;DP4=2456,2463,23,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.41971e-22;MQSB=0.943186;RPB=0.921977;SGB=134.004;VDB=0.60115;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.3:21001531 chr03:021001531 0 W/21001531-21001531 FN1536-S Single Base Substitution C-T INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN_829-2-5.SNP.3:21008603 chr03:021008603 0 W/21008603-21008603 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN708-S.SNP.3:21010040 chr03:021010040 0 W/21010040-21010040 FN708-S Single Base Substitution A-T INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN509-S.SNP.3:21010215 chr03:021010215 0 W/21010215-21010215 FN509-S Single Base Substitution G-A INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN561-S.SNP.3:21011170 chr03:021011170 0 W/21011170-21011170 FN561-S Single Base Substitution A-G INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN1658-S.SNP.3:21017393 chr03:021017393 0 W/21017393-21017393 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.685413;DP=1905;DP4=973,867,3,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.000231606;MQSB=0.927119;RPB=0.941266;SGB=30.8063;VDB=0.822455;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.3:21033225 chr03:021033225 0 W/21033225-21033225 FN933-S Single Base Substitution T-C INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN987-S.SNP.3:21041047 chr03:021041047 0 W/21041047-21041047 FN987-S Single Base Substitution G-A INTERGENIC HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2735-S.SNP.3:21049440 chr03:021049440 0 W/21049440-21049440 FN2735-S SNP G -> A AC=1;AN=200;BQB=0.991232;DP=4754;DP4=2236,2190,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60979e-12;MQSB=0.849194;RPB=0.499339;SGB=39.9056;VDB=0.422113;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.3:21049441 chr03:021049441 0 W/21049441-21049441 FN2735-S SNP C -> A AC=1;AN=200;BQB=0.775228;DP=4752;DP4=2325,2143,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37406e-15;MQSB=0.892943;RPB=0.430551;SGB=47.7211;VDB=0.741414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.3:21067238 chr03:021067238 0 W/21067238-21067238 FN1241-S Single Base Substitution C-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3522-S.SNP.3:21069180 chr03:021069180 0 W/21069180-21069180 FN3522-S SNP C -> T AC=1;AN=188;BQB=0.782358;DP=2323;DP4=1504,747,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.56491e-05;MQSB=0.757924;RPB=0.828389;SGB=13.3597;VDB=0.0310742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.3:21069188 chr03:021069188 0 W/21069188-21069188 FN3722-S SNP T -> C AC=1;AN=190;BQB=0.983331;DP=2293;DP4=1377,737,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37777e-09;MQSB=0.924073;RPB=0.624153;SGB=4.11112;VDB=0.382639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.3:21076250 chr03:021076250 0 W/21076250-21076250 FN1210-S Single Base Substitution G-T INTERGENIC HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2342.SNP.3:21096203 chr03:021096203 0 W/21096203-21096203 FN2342 SNP C -> T AC=1;AN=192;BQB=0.0713508;DP=4373;DP4=2144,1938,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.94481e-06;MQSB=0.941489;RPB=0.732326;SGB=-78.8817;VDB=0.80169;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V423|550|LOC_Os03g37984|protein_coding|CODING|LOC_Os03g37984.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V365|492|LOC_Os03g37984|protein_coding|CODING|LOC_Os03g37984.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V348|475|LOC_Os03g37984|protein_coding|CODING|LOC_Os03g37984.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V348|475|LOC_Os03g37984|protein_coding|CODING|LOC_Os03g37984.5|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V348|475|LOC_Os03g37984|protein_coding|CODING|LOC_Os03g37984.4|2|1) FN3286-S.SNP.3:21099192 chr03:021099192 0 W/21099192-21099192 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.928682;DP=3184;DP4=1695,1375,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.17584e-07;MQSB=0.842453;RPB=0.982635;SGB=39.699;VDB=0.775568;EFF=INTRON(MODIFIER||||228|LOC_Os03g38000|protein_coding|CODING|LOC_Os03g38000.1|2|1),INTRON(MODIFIER||||205|LOC_Os03g38000|protein_coding|CODING|LOC_Os03g38000.2|1|1) FN3286-S.SNP.3:21099194 chr03:021099194 0 W/21099194-21099194 FN3286-S SNP G -> T AC=1;AN=184;BQB=0.927274;DP=3159;DP4=1679,1375,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36426e-07;MQSB=0.69249;RPB=0.968771;SGB=28.7043;VDB=0.739018;EFF=INTRON(MODIFIER||||228|LOC_Os03g38000|protein_coding|CODING|LOC_Os03g38000.1|2|1),INTRON(MODIFIER||||205|LOC_Os03g38000|protein_coding|CODING|LOC_Os03g38000.2|1|1) FN3815-S.SNP.3:21100983 chr03:021100983 0 W/21100983-21100983 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.973807;DP=2427;DP4=1210,1133,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.95823e-05;MQSB=0.906235;RPB=0.71885;SGB=26.3271;VDB=0.632197;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.3:21112030 chr03:021112030 0 W/21112030-21112030 FN825-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3446-S.SNP.3:21116058 chr03:021116058 0 W/21116058-21116058 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.427495;DP=3288;DP4=1563,1635,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000187593;MQSB=0.838732;RPB=0.333556;SGB=39.699;VDB=0.659505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R42W|173|LOC_Os03g38040|protein_coding|CODING|LOC_Os03g38040.1|1|1) FN418-S.SNP.3:21131738 chr03:021131738 0 W/21131738-21131738 FN418-S Single Base Substitution A-G INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-265.SNP.3:21132433 chr03:021132433 0 W/21132433-21132433 FN-265 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g38070 retrotransposon protein, putative, unclassified, expressed SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN239-S.SNP.3:21135640 chr03:021135640 0 W/21135640-21135640 FN239-S Single Base Substitution A-T INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3534-S.SNP.3:21139988 chr03:021139988 0 W/21139988-21139988 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.99938;DP=3770;DP4=2142,1564,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000530504;MQB=1.46497e-12;MQSB=0.992805;RPB=0.791397;SGB=60.7873;VDB=0.811963;EFF=INTRON(MODIFIER||||561|LOC_Os03g38082|protein_coding|CODING|LOC_Os03g38082.1|2|1) FN2538-S.SNP.3:21141855 chr03:021141855 0 W/21141855-21141855 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.894803;DP=3916;DP4=2100,1653,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.10384e-11;MQSB=0.97507;RPB=0.0966734;SGB=81.7147;VDB=0.551438;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.3:21145250 chr03:021145250 0 W/21145250-21145250 FN1278-S Single Base Substitution C-G INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2598-S.SNP.3:21145301 chr03:021145301 0 W/21145301-21145301 FN2598-S SNP G -> A AC=2;AN=198;BQB=0.780796;DP=4292;DP4=2162,1719,34,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.47928e-31;MQSB=0.628925;RPB=0.783324;SGB=131.397;VDB=0.337438;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.3:21158021 chr03:021158021 0 W/21158021-21158021 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.918077;DP=2870;DP4=1354,1431,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.80111e-05;MQSB=0.633789;RPB=0.940066;SGB=21.8113;VDB=0.54263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P94L|287|LOC_Os03g38110|protein_coding|CODING|LOC_Os03g38110.1|2|1) FN-240.SNP.3:21158554 chr03:021158554 0 W/21158554-21158554 FN-240 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g38110 retrotransposon, putative, centromere-specific SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN506-S.SNP.3:21161523 chr03:021161523 0 W/21161523-21161523 FN506-S Single Base Substitution C-T INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN1382-S.SNP.3:21165960 chr03:021165960 0 W/21165960-21165960 FN1382-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3925-S.SNP.3:21169489 chr03:021169489 0 W/21169489-21169489 FN3925-S SNP A -> T AC=1;AN=158;BQB=0.923412;DP=2395;DP4=1157,1131,13,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.87817e-15;MQSB=0.806967;RPB=0.834733;SGB=116.978;VDB=0.802506;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.3:21196461 chr03:021196461 0 W/21196461-21196461 FN897-S Single Base Substitution T-A INTRON HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2752-S.SNP.3:21198057 chr03:021198057 0 W/21198057-21198057 FN2752-S SNP T -> A AC=1;AN=198;BQB=0.375616;DP=4593;DP4=2050,2361,3,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.91991e-09;MQSB=0.999987;RPB=0.653405;SGB=6.27959;VDB=0.939879;EFF=INTRON(MODIFIER||||141|LOC_Os03g38170|protein_coding|CODING|LOC_Os03g38170.2|1|1) FN4325-S.SNP.3:21198128 chr03:021198128 0 W/21198128-21198128 FN4325-S SNP A -> T AC=2;AN=170;BQB=0.816704;DP=2606;DP4=1401,1115,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.12275e-11;MQSB=0.959633;RPB=0.260329;SGB=101.184;VDB=0.915228;EFF=INTRON(MODIFIER||||141|LOC_Os03g38170|protein_coding|CODING|LOC_Os03g38170.2|1|1) FN764-S.SNP.3:21201462 chr03:021201462 0 W/21201462-21201462 FN764-S Single Base Substitution G-T INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2126-S.SNP.3:21202392 chr03:021202392 0 W/21202392-21202392 FN2126-S SNP G -> A AC=1;AN=168;BQB=0.935657;DP=3218;DP4=2256,902,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.26482e-12;MQSB=0.447497;RPB=0.919179;SGB=-44.6276;VDB=0.0273141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.3:21207270 chr03:021207270 0 W/21207270-21207270 FN2361 SNP C -> T AC=2;AN=192;BQB=0.638811;DP=4206;DP4=1773,2162,30,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.07743e-34;MQSB=0.59205;RPB=0.863018;SGB=203.74;VDB=0.293471;EFF=INTRON(MODIFIER||||179|LOC_Os03g38190|protein_coding|CODING|LOC_Os03g38190.1|4|1) FN1525-S.SNP.3:21209588 chr03:021209588 0 W/21209588-21209588 FN1525-S Single Base Substitution A-G INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN571-S.SNP.3:21220020 chr03:021220020 0 W/21220020-21220020 FN571-S Single Base Substitution A-G INTERGENIC HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3858-S.SNP.3:21229437 chr03:021229437 0 W/21229437-21229437 FN3858-S SNP C -> G AC=1;AN=158;BQB=0.964297;DP=2415;DP4=1479,829,13,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.2905e-12;MQSB=0.993242;RPB=0.950334;SGB=30.927;VDB=0.532962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C112W|284|LOC_Os03g38240|protein_coding|CODING|LOC_Os03g38240.1|2|1) FN625-S.SNP.3:21231954 chr03:021231954 0 W/21231954-21231954 FN625-S Single Base Substitution T-A INTRON HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3430-S.SNP.3:21241837 chr03:021241837 0 W/21241837-21241837 FN3430-S SNP T -> C AC=1;AN=184;BQB=0.873969;DP=3151;DP4=1736,1288,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15311e-07;MQSB=0.979939;RPB=0.778507;SGB=48.7425;VDB=0.951411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.3:21249331 chr03:021249331 0 W/21249331-21249331 FN2106-S SNP G -> A AC=2;AN=168;BQB=0.550762;DP=2514;DP4=1084,1350,15,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19931e-14;MQSB=0.574607;RPB=0.988397;SGB=82.7794;VDB=0.814106;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N620|1515|LOC_Os03g38284|protein_coding|CODING|LOC_Os03g38284.1|5|1) FN1493-S.SNP.3:21251487 chr03:021251487 0 W/21251487-21251487 FN1493-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN-269.SNP.3:21256042 chr03:021256042 0 W/21256042-21256042 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1755-S.SNP.3:21256696 chr03:021256696 0 W/21256696-21256696 FN1755-S SNP A -> G AC=1;AN=188;BQB=0.730983;DP=3237;DP4=1210,1984,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000926784;MQB=3.47366e-09;MQSB=1.60838e-05;RPB=0.998033;SGB=78.5038;VDB=0.129045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.3:21257518 chr03:021257518 0 W/21257518-21257518 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.943087;DP=5009;DP4=2753,2011,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0281493;MQB=0.0138289;MQSB=1.25438e-10;RPB=0.981256;SGB=25.7687;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.3:21260426 chr03:021260426 0 W/21260426-21260426 FN2333 SNP C -> T AC=1;AN=192;BQB=0.932302;DP=5415;DP4=2908,2234,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.92199e-06;MQSB=0.226914;RPB=0.939353;SGB=29.087;VDB=0.382943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.3:21262566 chr03:021262566 0 W/21262566-21262566 FN3760-S SNP G -> A AC=2;AN=190;BQB=0.796831;DP=3034;DP4=1495,1442,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.57794e-17;MQSB=0.998541;RPB=0.863012;SGB=140.173;VDB=0.438608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M400I|419|LOC_Os03g38310|protein_coding|CODING|LOC_Os03g38310.1|2|1) FN3846-S.SNP.3:21264895 chr03:021264895 0 W/21264895-21264895 FN3846-S SNP T -> C AC=1;AN=190;BQB=0.973916;DP=3075;DP4=1409,1599,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.94916e-08;MQSB=0.584724;RPB=0.903726;SGB=53.6492;VDB=0.596958;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.3:21268022 chr03:021268022 0 W/21268022-21268022 FN-134 Single Base Substitution A-C INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2231-S.SNP.3:21271953 chr03:021271953 0 W/21271953-21271953 FN2231-S SNP T -> A AC=1;AN=190;BQB=0.928554;DP=5561;DP4=2351,2876,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.43042e-12;MQSB=0.497635;RPB=0.810216;SGB=38.983;VDB=0.0387806;EFF=INTRON(MODIFIER||||1122|LOC_Os03g38330|protein_coding|CODING|LOC_Os03g38330.1|2|1) FN788-S.SNP.3:21273927 chr03:021273927 0 W/21273927-21273927 FN788-S Single Base Substitution G-T INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN3958-S.SNP.3:21285008 chr03:021285008 0 W/21285008-21285008 FN3958-S SNP A -> C AC=1;AN=168;BQB=0.99453;DP=2758;DP4=1192,1465,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.7564e-12;MQSB=0.948337;RPB=0.169622;SGB=78.7577;VDB=0.0533289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.3:21286116 chr03:021286116 0 W/21286116-21286116 FN2351 SNP C -> T AC=2;AN=192;BQB=0.960866;DP=4882;DP4=2181,2394,12,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.09105e-16;MQSB=0.999945;RPB=0.662789;SGB=100.374;VDB=0.440574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.3:21289192 chr03:021289192 0 W/21289192-21289192 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.862452;DP=5098;DP4=2186,2620,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66627e-08;MQSB=0.753609;RPB=0.934348;SGB=43.8747;VDB=0.796389;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.3:21302434 chr03:021302434 0 W/21302434-21302434 FN-375 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g38370 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2620-S.SNP.3:21303201 chr03:021303201 0 W/21303201-21303201 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.257475;DP=4142;DP4=1987,1911,19,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.84064e-18;MQSB=0.72429;RPB=0.822558;SGB=136.856;VDB=0.932139;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y27|396|LOC_Os03g38370|protein_coding|CODING|LOC_Os03g38370.1|1|1) FN2620-S.SNP.3:21303202 chr03:021303202 0 W/21303202-21303202 FN2620-S SNP T -> A AC=1;AN=198;BQB=0.291122;DP=4146;DP4=1988,1906,19,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.03418e-18;MQSB=0.740933;RPB=0.700178;SGB=141.451;VDB=0.897502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y27F|396|LOC_Os03g38370|protein_coding|CODING|LOC_Os03g38370.1|1|1) FN1460-S.SNP.3:21307348 chr03:021307348 0 W/21307348-21307348 FN1460-S Single Base Substitution A-T INTRON HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3751-S.SNP.3:21314829 chr03:021314829 0 W/21314829-21314829 FN3751-S SNP C -> T AC=1;AN=190;BQB=0.999879;DP=3181;DP4=1440,1658,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.27176e-10;MQSB=0.982551;RPB=0.75431;SGB=71.8647;VDB=0.799447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.3:21322761 chr03:021322761 0 W/21322761-21322761 FN3661-S SNP C -> G AC=1;AN=190;BQB=0.939163;DP=2430;DP4=1058,1295,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02171e-05;MQSB=0.997447;RPB=0.991965;SGB=30.8803;VDB=0.27141;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.3:21345168 chr03:021345168 0 W/21345168-21345168 FN1351-S Single Base Substitution T-C INTRON HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1413-S.SNP.3:21346697 chr03:021346697 0 W/21346697-21346697 FN1413-S Single Base Substitution A-G INTRON HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2630-S.SNP.3:21353122 chr03:021353122 0 W/21353122-21353122 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.928685;DP=4576;DP4=2178,2180,7,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.13028e-05;MQSB=0.164988;RPB=0.825602;SGB=47.4799;VDB=0.406889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.3:21355093 chr03:021355093 0 W/21355093-21355093 FN1740-S SNP T -> A AC=1;AN=188;BQB=0.942014;DP=1865;DP4=874,961,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.21565e-07;MQSB=0.943698;RPB=0.781973;SGB=15.903;VDB=0.185475;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L284*|367|LOC_Os03g38470|protein_coding|CODING|LOC_Os03g38470.1|4|1) FN1506-S.SNP.3:21356150 chr03:021356150 0 W/21356150-21356150 FN1506-S Single Base Substitution T-C INTRON Homo SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. W464-2-1.SNP.3:21361517 chr03:021361517 0 W/21361517-21361517 W464-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g38480 expressed protein SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN1108-S.SNP.3:21370465 chr03:021370465 0 W/21370465-21370465 FN1108-S Single Base Substitution C-T INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2166-S.SNP.3:21370545 chr03:021370545 0 W/21370545-21370545 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.00139475;DP=4244;DP4=1912,2166,25,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.13771e-09;MQSB=0.83289;RPB=0.173281;SGB=-595.987;VDB=0.332587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.3:21371042 chr03:021371042 0 W/21371042-21371042 FN2481 SNP C -> G AC=1;AN=200;BQB=0.535449;DP=4525;DP4=2113,2072,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.37218e-09;MQSB=0.994894;RPB=0.478082;SGB=3.06925;VDB=0.107093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.3:21377557 chr03:021377557 0 W/21377557-21377557 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.996749;DP=4709;DP4=2332,2129,3,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.34889e-08;MQSB=0.578162;RPB=0.262456;SGB=40.2696;VDB=0.577602;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.3:21382866 chr03:021382866 0 W/21382866-21382866 FN1080-S Single Base Substitution G-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2544-S.SNP.3:21391093 chr03:021391093 0 W/21391093-21391093 FN2544-S SNP A -> C AC=2;AN=198;BQB=0.980896;DP=4202;DP4=1900,2050,18,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.06724e-17;MQSB=0.999265;RPB=0.751708;SGB=65.676;VDB=0.295003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.3:21397303 chr03:021397303 0 W/21397303-21397303 FN3771-S SNP C -> T AC=1;AN=190;BQB=0.898856;DP=4822;DP4=2928,1753,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42367e-06;MQSB=0.430349;RPB=0.859349;SGB=62.7569;VDB=0.0482203;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.3:21399439 chr03:021399439 0 W/21399439-21399439 FN369-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3970-S.SNP.3:21399722 chr03:021399722 0 W/21399722-21399722 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.87582;DP=1975;DP4=875,988,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=2.1886e-10;MQSB=0.676039;RPB=0.97762;SGB=92.0501;VDB=0.978099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E654K|913|LOC_Os03g38560|protein_coding|CODING|LOC_Os03g38560.1|3|1) FN3421-S.SNP.3:21399751 chr03:021399751 0 W/21399751-21399751 FN3421-S SNP G -> A AC=2;AN=184;BQB=0.742789;DP=3744;DP4=1743,1885,22,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.000267094;MQB=6.36385e-16;MQSB=0.821295;RPB=0.932221;SGB=109.705;VDB=0.106347;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T663|913|LOC_Os03g38560|protein_coding|CODING|LOC_Os03g38560.1|3|1) FN1728-S.SNP.3:21400126 chr03:021400126 0 W/21400126-21400126 FN1728-S SNP C -> T AC=1;AN=188;BQB=0.52652;DP=1285;DP4=591,635,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000762542;MQSB=0.459198;RPB=0.994349;SGB=21.8113;VDB=0.43188;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A788|913|LOC_Os03g38560|protein_coding|CODING|LOC_Os03g38560.1|3|1) FN471-S.SNP.3:21406691 chr03:021406691 0 W/21406691-21406691 FN471-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g38570 retrotransposon protein, putative, unclassified, expressed SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN471-S.SNP.3:21406692 chr03:021406692 0 W/21406692-21406692 FN471-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g38570 retrotransposon protein, putative, unclassified, expressed SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN4255-S.SNP.3:21406739 chr03:021406739 0 W/21406739-21406739 FN4255-S SNP C -> T AC=2;AN=170;BQB=0.740443;DP=2151;DP4=1043,1033,13,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.79927e-14;MQSB=0.669368;RPB=0.458202;SGB=76.1898;VDB=0.903353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R222Q|2002|LOC_Os03g38570|protein_coding|CODING|LOC_Os03g38570.1|1|1) FN930-S.SNP.3:21407364 chr03:021407364 0 W/21407364-21407364 FN930-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g38570 retrotransposon protein, putative, unclassified, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN4140-S.SNP.3:21415930 chr03:021415930 0 W/21415930-21415930 FN4140-S SNP C -> A AC=1;AN=170;BQB=0.755291;DP=2365;DP4=1105,1207,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.59885e-07;MQSB=0.951638;RPB=0.638779;SGB=38.3207;VDB=0.936957;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.3:21426818 chr03:021426818 0 W/21426818-21426818 FN-121 Single Base Substitution C-T INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1475-S.SNP.3:21426818 chr03:021426818 0 W/21426818-21426818 FN1475-S Single Base Substitution C-T INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN750-S.SNP.3:21429428 chr03:021429428 0 W/21429428-21429428 FN750-S Single Base Substitution A-G INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN3323-S.SNP.3:21433495 chr03:021433495 0 W/21433495-21433495 FN3323-S SNP G -> C AC=1;AN=184;BQB=0.923013;DP=3830;DP4=1801,1888,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000607204;MQSB=0.585068;RPB=0.911443;SGB=62.3078;VDB=0.109787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G78A|243|LOC_Os03g38620|protein_coding|CODING|LOC_Os03g38620.1|3|1) FN3782-S.SNP.3:21434349 chr03:021434349 0 W/21434349-21434349 FN3782-S SNP C -> A AC=1;AN=190;BQB=0.978017;DP=2798;DP4=1138,1462,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53464e-05;MQSB=0.154956;RPB=0.85416;SGB=25.439;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.3:21439055 chr03:021439055 0 W/21439055-21439055 FN4152-S SNP T -> C AC=1;AN=170;BQB=0.981137;DP=2451;DP4=1208,1185,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.14565e-08;MQSB=0.992302;RPB=0.999726;SGB=52.3148;VDB=0.497166;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.3:21444129 chr03:021444129 0 W/21444129-21444129 FN4090-S SNP C -> T AC=1;AN=182;BQB=0.963711;DP=3096;DP4=1504,1542,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00226098;MQB=9.59884e-06;MQSB=0.808805;RPB=0.970912;SGB=28.6061;VDB=0.914019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.3:21445420 chr03:021445420 0 W/21445420-21445420 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN899-S.SNP.3:21448232 chr03:021448232 0 W/21448232-21448232 FN899-S Single Base Substitution T-C INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2152-S.SNP.3:21449338 chr03:021449338 0 W/21449338-21449338 FN2152-S SNP G -> A AC=1;AN=168;BQB=0.926364;DP=4408;DP4=2243,2113,18,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.07343e-21;MQSB=0.999392;RPB=0.965433;SGB=-6.32537;VDB=0.167311;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.3:21449462 chr03:021449462 0 W/21449462-21449462 FN836-S Single Base Substitution T-C INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2680-S.SNP.3:21450590 chr03:021450590 0 W/21450590-21450590 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.728021;DP=4355;DP4=2151,1961,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000229621;MQB=2.26532e-10;MQSB=0.970827;RPB=0.99977;SGB=47.4799;VDB=0.921221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.3:21452263 chr03:021452263 0 W/21452263-21452263 FN2444 SNP C -> T AC=1;AN=200;BQB=0.160706;DP=4306;DP4=2102,1988,4,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00681761;MQSB=0.0808319;RPB=0.325845;SGB=36.6644;VDB=0.354017;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.3:21454976 chr03:021454976 0 W/21454976-21454976 FN425-S Single Base Substitution T-C INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN3355-S.SNP.3:21457681 chr03:021457681 0 W/21457681-21457681 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.971068;DP=3675;DP4=1859,1639,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.67117e-14;MQSB=0.982697;RPB=0.693985;SGB=103.004;VDB=0.566267;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.3:21459821 chr03:021459821 0 W/21459821-21459821 FN715-S Single Base Substitution T-G INTERGENIC HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1576-S.SNP.3:21465403 chr03:021465403 0 W/21465403-21465403 FN1576-S Single Base Substitution A-G INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2158-S.SNP.3:21466625 chr03:021466625 0 W/21466625-21466625 FN2158-S SNP C -> T AC=2;AN=168;BQB=0.239395;DP=2546;DP4=1257,1241,18,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00706991;MQB=5.3189e-07;MQSB=0.000583269;RPB=0.982443;SGB=-79.0524;VDB=0.679594;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.3:21471556 chr03:021471556 0 W/21471556-21471556 FN421-S Single Base Substitution G-A INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1114-S.SNP.3:21472654 chr03:021472654 0 W/21472654-21472654 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN775-S.SNP.3:21474006 chr03:021474006 0 W/21474006-21474006 FN775-S Single Base Substitution A-G INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN912-S.SNP.3:21475838 chr03:021475838 0 W/21475838-21475838 FN912-S Single Base Substitution A-G INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN3387-S.SNP.3:21476012 chr03:021476012 0 W/21476012-21476012 FN3387-S SNP G -> A AC=2;AN=184;BQB=0.893107;DP=3014;DP4=1849,1055,13,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.77114e-09;MQSB=0.680999;RPB=0.51397;SGB=56.8786;VDB=0.860319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3974-S.SNP.3:21476618 chr03:021476618 0 W/21476618-21476618 FN3974-S SNP G -> A AC=2;AN=168;BQB=0.683727;DP=2952;DP4=1451,1297,14,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.80817e-10;MQSB=0.234513;RPB=0.981478;SGB=-72.7757;VDB=0.709145;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.3:21479777 chr03:021479777 0 W/21479777-21479777 CW-631-3-1 Single Base Substitution A-G INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2128-S.SNP.3:21482187 chr03:021482187 0 W/21482187-21482187 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.521711;DP=3015;DP4=1231,1743,6,15;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.133002;MQB=0.519075;MQSB=5.43453e-18;RPB=0.526916;SGB=11.3448;VDB=0.793292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.3:21497515 chr03:021497515 0 W/21497515-21497515 FN-201 Single Base Substitution A-T INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2607-S.SNP.3:21526346 chr03:021526346 0 W/21526346-21526346 FN2607-S SNP A -> T AC=1;AN=198;BQB=0.643221;DP=3576;DP4=1746,1619,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000279642;MQB=4.55857e-07;MQSB=0.187044;RPB=0.993952;SGB=29.3637;VDB=0.801999;EFF=INTRON(MODIFIER||||1229|LOC_Os03g38764|protein_coding|CODING|LOC_Os03g38764.1|1|1) FN3630-S.SNP.3:21533985 chr03:021533985 0 W/21533985-21533985 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.887514;DP=2888;DP4=1508,1257,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.83928e-07;MQSB=0.903926;RPB=0.701398;SGB=36.1006;VDB=0.812842;EFF=INTRON(MODIFIER||||337|LOC_Os03g38780|protein_coding|CODING|LOC_Os03g38780.1|3|1) FN1173-S.SNP.3:21535594 chr03:021535594 0 W/21535594-21535594 FN1173-S Single Base Substitution C-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2455.SNP.3:21541323 chr03:021541323 0 W/21541323-21541323 FN2455 SNP T -> G AC=1;AN=200;BQB=0.499001;DP=3704;DP4=1252,1800,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8591e-10;MQSB=0.073409;RPB=0.66902;SGB=34.6953;VDB=0.825672;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.3:21541500 chr03:021541500 0 W/21541500-21541500 FN-308 Single Base Substitution G-C INTERGENIC HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN3809-S.SNP.3:21543633 chr03:021543633 0 W/21543633-21543633 FN3809-S SNP C -> A AC=1;AN=190;BQB=0.930933;DP=2968;DP4=1237,1630,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.26957e-05;MQSB=0.994562;RPB=0.930933;SGB=35.4339;VDB=0.393825;EFF=INTRON(MODIFIER||||123|LOC_Os03g38790|protein_coding|CODING|LOC_Os03g38790.1|1|1),INTRON(MODIFIER||||64|LOC_Os03g38790|protein_coding|CODING|LOC_Os03g38790.2|2|1) FN2670-S.SNP.3:21547458 chr03:021547458 0 W/21547458-21547458 FN2670-S SNP A -> C AC=1;AN=200;BQB=0.348392;DP=4775;DP4=2049,2017,21,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.83389e-21;MQSB=0.824447;RPB=0.726526;SGB=78.9831;VDB=0.0349724;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.3:21549705 chr03:021549705 0 W/21549705-21549705 W607-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN897-S.SNP.3:21550227 chr03:021550227 0 W/21550227-21550227 FN897-S Single Base Substitution C-A INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3305-S.SNP.3:21550523 chr03:021550523 0 W/21550523-21550523 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.916873;DP=3919;DP4=1742,2077,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.57239e-10;MQSB=0.959487;RPB=0.968439;SGB=53.3568;VDB=0.803347;EFF=INTRON(MODIFIER||||95|LOC_Os03g38810|protein_coding|CODING|LOC_Os03g38810.1|1|1) FN2708-S.SNP.3:21552725 chr03:021552725 0 W/21552725-21552725 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.796568;DP=4967;DP4=2359,2210,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56549e-11;MQSB=0.900911;RPB=0.489999;SGB=79.9264;VDB=0.630495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.3:21553602 chr03:021553602 0 W/21553602-21553602 FN1429-S Single Base Substitution C-T INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3730-S.SNP.3:21553602 chr03:021553602 0 W/21553602-21553602 FN3730-S SNP C -> T AC=2;AN=190;BQB=0.988425;DP=2791;DP4=1400,1249,27,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.89413e-23;MQSB=0.997516;RPB=0.948111;SGB=106.906;VDB=0.388598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.3:21553602 chr03:021553602 0 W/21553602-21553602 FN3753-S SNP C -> T AC=2;AN=190;BQB=0.723846;DP=2783;DP4=1431,1238,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.33055e-13;MQSB=0.873163;RPB=0.802984;SGB=85.8548;VDB=0.778031;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.3:21553602 chr03:021553602 0 W/21553602-21553602 FN4139-S SNP C -> T AC=2;AN=170;BQB=0.995144;DP=2467;DP4=1241,1120,21,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.99776e-23;MQSB=0.922636;RPB=0.999381;SGB=127.83;VDB=0.659143;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.3:21553602 chr03:021553602 0 W/21553602-21553602 FN695-S Single Base Substitution C-T INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2418.SNP.3:21553837 chr03:021553837 0 W/21553837-21553837 FN2418 SNP T -> A AC=1;AN=200;BQB=0.996602;DP=4298;DP4=2039,1977,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.64879e-06;MQSB=0.994722;RPB=0.835971;SGB=54.2646;VDB=0.957095;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.3:21554011 chr03:021554011 0 W/21554011-21554011 FN512-S Single Base Substitution C-T INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN840-S.SNP.3:21561225 chr03:021561225 0 W/21561225-21561225 FN840-S Single Base Substitution C-T INTERGENIC HOMO SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3342-S.SNP.3:21563266 chr03:021563266 0 W/21563266-21563266 FN3342-S SNP G -> A AC=1;AN=184;BQB=0.993178;DP=3139;DP4=1409,1618,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77329e-07;MQSB=0.711594;RPB=0.62043;SGB=53.2642;VDB=0.686723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.3:21563873 chr03:021563873 0 W/21563873-21563873 FN1182-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1042-S.SNP.3:21564262 chr03:021564262 0 W/21564262-21564262 FN1042-S Single Base Substitution C-T INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. W502-3-4.SNP.3:21568163 chr03:021568163 0 W/21568163-21568163 W502-3-4 Single Base Substitution T-A INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1080-S.SNP.3:21568470 chr03:021568470 0 W/21568470-21568470 FN1080-S Single Base Substitution A-C INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1509-S.SNP.3:21569645 chr03:021569645 0 W/21569645-21569645 FN1509-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g38840 retrotransposon, putative, centromere-specific SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3779-S.SNP.3:21577845 chr03:021577845 0 W/21577845-21577845 FN3779-S SNP G -> T AC=1;AN=190;BQB=0.925334;DP=2586;DP4=1295,1185,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38324e-10;MQSB=0.184649;RPB=0.930336;SGB=94.6341;VDB=0.991746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D838Y|1425|LOC_Os03g38850|protein_coding|CODING|LOC_Os03g38850.1|6|1) FN825-S.SNP.3:21581220 chr03:021581220 0 W/21581220-21581220 FN825-S Single Base Substitution C-T INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2541-S.SNP.3:21581851 chr03:021581851 0 W/21581851-21581851 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.846937;DP=3171;DP4=1403,1478,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000315358;MQB=1.60825e-13;MQSB=0.68071;RPB=0.147424;SGB=68.91;VDB=0.189749;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.3:21582374 chr03:021582374 0 W/21582374-21582374 FN494-S Single Base Substitution G-C INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1709-S.SNP.3:21593437 chr03:021593437 0 W/21593437-21593437 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.495503;DP=2141;DP4=1570,531,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.97972e-06;MQSB=0.87672;RPB=0.98836;SGB=32.441;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.3:21594906 chr03:021594906 0 W/21594906-21594906 FN3910-S SNP A -> T AC=1;AN=158;BQB=0.231511;DP=2598;DP4=1292,1205,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.73803e-06;MQSB=0.999943;RPB=0.550831;SGB=3.4556;VDB=0.336775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.3:21610454 chr03:021610454 0 W/21610454-21610454 FN2788-S SNP C -> G AC=1;AN=198;BQB=0.638285;DP=3796;DP4=1967,1571,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.0799e-11;MQSB=0.946689;RPB=0.918405;SGB=34.5346;VDB=0.800228;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.3:21611196 chr03:021611196 0 W/21611196-21611196 FN429-S Single Base Substitution T-C INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. W554-1-1.SNP.3:21611277 chr03:021611277 0 W/21611277-21611277 W554-1-1 Single Base Substitution G-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3821-S.SNP.3:21614650 chr03:021614650 0 W/21614650-21614650 FN3821-S SNP G -> A AC=2;AN=190;BQB=0.998937;DP=3124;DP4=1659,1326,19,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.49947e-18;MQSB=0.88893;RPB=0.89271;SGB=135.619;VDB=0.396654;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.3:21618834 chr03:021618834 0 W/21618834-21618834 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2327.SNP.3:21620642 chr03:021620642 0 W/21620642-21620642 FN2327 SNP A -> T AC=1;AN=192;BQB=0.341844;DP=4640;DP4=1857,2355,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.16999e-10;MQSB=0.802353;RPB=0.411323;SGB=46.9087;VDB=0.0617598;EFF=INTRON(MODIFIER||||180|LOC_Os03g38920|protein_coding|CODING|LOC_Os03g38920.1|2|1) FN825-S.SNP.3:21621618 chr03:021621618 0 W/21621618-21621618 FN825-S Single Base Substitution C-A INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN825-S.SNP.3:21621622 chr03:021621622 0 W/21621622-21621622 FN825-S Single Base Substitution C-A INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN410-S.SNP.3:21630774 chr03:021630774 0 W/21630774-21630774 FN410-S Single Base Substitution A-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2115-S.SNP.3:21633685 chr03:021633685 0 W/21633685-21633685 FN2115-S SNP G -> A AC=1;AN=168;BQB=0.61982;DP=2184;DP4=1111,1015,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.55167e-09;MQSB=0.994036;RPB=0.989308;SGB=11.3448;VDB=0.726545;EFF=START_GAINED(LOW||||114|LOC_Os03g38940|protein_coding|CODING|LOC_Os03g38940.1|1|1),UTR_5_PRIME(MODIFIER||25||114|LOC_Os03g38940|protein_coding|CODING|LOC_Os03g38940.1|1|1) FN3757-S.SNP.3:21639217 chr03:021639217 0 W/21639217-21639217 FN3757-S SNP T -> C AC=2;AN=190;BQB=0.721211;DP=2884;DP4=1354,1424,20,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.42529e-17;MQSB=0.893386;RPB=0.934615;SGB=153.834;VDB=0.420208;EFF=INTRON(MODIFIER||||142|LOC_Os03g38960|protein_coding|CODING|LOC_Os03g38960.1|4|1),INTRON(MODIFIER||||191|LOC_Os03g38960|protein_coding|CODING|LOC_Os03g38960.2|3|1) FN3770-S.SNP.3:21648696 chr03:021648696 0 W/21648696-21648696 FN3770-S SNP G -> A AC=1;AN=190;BQB=0.981545;DP=2822;DP4=1275,1442,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22894e-08;MQSB=0.972625;RPB=0.941588;SGB=39.6545;VDB=0.925504;EFF=INTRON(MODIFIER||||1256|LOC_Os03g38970|protein_coding|CODING|LOC_Os03g38970.1|18|1) FN3504-S.SNP.3:21653261 chr03:021653261 0 W/21653261-21653261 FN3504-S SNP T -> C AC=1;AN=188;BQB=0.955557;DP=2702;DP4=1420,1220,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.136e-08;MQSB=0.999477;RPB=0.602518;SGB=48.979;VDB=0.675843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E563G|1256|LOC_Os03g38970|protein_coding|CODING|LOC_Os03g38970.1|12|1) FN2374.SNP.3:21654375 chr03:021654375 0 W/21654375-21654375 FN2374 SNP G -> T AC=1;AN=192;BQB=0.680945;DP=5105;DP4=2653,2140,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000195886;MQB=8.28445e-08;MQSB=0.997682;RPB=0.778543;SGB=5.79046;VDB=0.969002;EFF=INTRON(MODIFIER||||1256|LOC_Os03g38970|protein_coding|CODING|LOC_Os03g38970.1|10|1) FN-12.SNP.3:21657537 chr03:021657537 0 W/21657537-21657537 FN-12 Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os03g38970 metal ion binding protein, putative, expressed SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN459-S.SNP.3:21676043 chr03:021676043 0 W/21676043-21676043 FN459-S Single Base Substitution C-A INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1419-S.SNP.3:21678444 chr03:021678444 0 W/21678444-21678444 FN1419-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g38990 DNA-binding protein, putative, expressed SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3090-S.SNP.3:21678625 chr03:021678625 0 W/21678625-21678625 FN3090-S SNP T -> C AC=1;AN=184;BQB=0.958359;DP=2539;DP4=1231,1190,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.22197e-08;MQSB=0.983493;RPB=0.762416;SGB=48.7425;VDB=0.845817;EFF=INTRON(MODIFIER||||651|LOC_Os03g38990|protein_coding|CODING|LOC_Os03g38990.1|12|1) FN2399.SNP.3:21691461 chr03:021691461 0 W/21691461-21691461 FN2399 SNP T -> C AC=2;AN=200;BQB=0.851342;DP=4953;DP4=2537,2088,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.7164e-28;MQSB=0.848392;RPB=0.918886;SGB=206.235;VDB=0.897159;EFF=INTRON(MODIFIER||||1129|LOC_Os03g39020|protein_coding|CODING|LOC_Os03g39020.1|7|1) FN3720-S.SNP.3:21695372 chr03:021695372 0 W/21695372-21695372 FN3720-S SNP G -> T AC=1;AN=190;BQB=0.985698;DP=2797;DP4=1428,1252,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99013e-08;MQSB=0.96152;RPB=0.464693;SGB=49.0954;VDB=0.57666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.3:21695373 chr03:021695373 0 W/21695373-21695373 FN3720-S SNP C -> T AC=1;AN=190;BQB=0.891164;DP=2792;DP4=1426,1253,12,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78733e-09;MQSB=0.901317;RPB=0.323749;SGB=58.2031;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.3:21701656 chr03:021701656 0 W/21701656-21701656 FN918-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g39040 zinc knuckle domain containing protein, expressed SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2791-S.SNP.3:21707060 chr03:021707060 0 W/21707060-21707060 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.349775;DP=4032;DP4=1774,2017,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22261e-11;MQSB=0.705445;RPB=0.540751;SGB=12.5396;VDB=0.103263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.3:21716990 chr03:021716990 0 W/21716990-21716990 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.88652;DP=4281;DP4=1993,2024,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00023359;MQB=1.70847e-10;MQSB=0.992663;RPB=0.344521;SGB=61.7198;VDB=0.651328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.3:21716991 chr03:021716991 0 W/21716991-21716991 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.723799;DP=4289;DP4=2006,2029,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233155;MQB=5.6757e-10;MQSB=0.994804;RPB=0.847364;SGB=39.7248;VDB=0.704625;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.3:21718601 chr03:021718601 0 W/21718601-21718601 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.93032;DP=2889;DP4=1439,1367,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.07175e-09;MQSB=0.875094;RPB=0.626266;SGB=55.806;VDB=0.539527;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.3:21723529 chr03:021723529 0 W/21723529-21723529 FN873-S Single Base Substitution G-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-316.SNP.3:21725611 chr03:021725611 0 W/21725611-21725611 FN-316 Single Base Substitution T-G INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2554-S.SNP.3:21751371 chr03:021751371 0 W/21751371-21751371 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.299893;DP=4416;DP4=2175,2066,20,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.91556e-14;MQSB=0.64128;RPB=0.775956;SGB=55.2955;VDB=0.944981;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K604|670|LOC_Os03g39160|protein_coding|CODING|LOC_Os03g39160.1|3|1) FN2268-S.SNP.3:21752551 chr03:021752551 0 W/21752551-21752551 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.577723;DP=5093;DP4=2165,2495,19,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68305e-25;MQSB=0.988555;RPB=0.985403;SGB=1.7327;VDB=0.259821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.3:21754162 chr03:021754162 0 W/21754162-21754162 FN2397 SNP C -> G AC=1;AN=200;BQB=0.869919;DP=4253;DP4=1954,2100,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.68403e-09;MQSB=0.962368;RPB=0.961212;SGB=68.0801;VDB=0.839413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.3:21755617 chr03:021755617 0 W/21755617-21755617 FN3499-S SNP C -> T AC=1;AN=188;BQB=0.976178;DP=2463;DP4=1162,1227,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2407e-06;MQSB=0.768245;RPB=0.653016;SGB=39.8925;VDB=0.612413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.3:21757317 chr03:021757317 0 W/21757317-21757317 FN2442 SNP C -> A AC=1;AN=200;BQB=0.288764;DP=3975;DP4=1619,1907,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000832908;MQSB=0.976383;RPB=0.0233557;SGB=45.0543;VDB=0.0622072;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A153|800|LOC_Os03g39170|protein_coding|CODING|LOC_Os03g39170.1|1|1) FN-185.SNP.3:21763940 chr03:021763940 0 W/21763940-21763940 FN-185 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN457-S.SNP.3:21766056 chr03:021766056 0 W/21766056-21766056 FN457-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g39190 expressed protein SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN2782-S.SNP.3:21766880 chr03:021766880 0 W/21766880-21766880 FN2782-S SNP G -> T AC=1;AN=198;BQB=0.195828;DP=3931;DP4=1664,2068,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73948e-11;MQSB=0.981829;RPB=0.997655;SGB=77.1196;VDB=0.455117;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.3:21768834 chr03:021768834 0 W/21768834-21768834 FN518-S Single Base Substitution G-A INTRON HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN4031-S.SNP.3:21769043 chr03:021769043 0 W/21769043-21769043 FN4031-S SNP T -> C AC=1;AN=168;BQB=0.767147;DP=2548;DP4=1322,1038,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.14639e-05;MQSB=0.00692943;RPB=0.853739;SGB=7.05233;VDB=0.467908;EFF=INTRON(MODIFIER||||51|LOC_Os03g39200|protein_coding|CODING|LOC_Os03g39200.1|1|1) FN3459-S.SNP.3:21769889 chr03:021769889 0 W/21769889-21769889 FN3459-S SNP A -> T AC=2;AN=184;BQB=0.963854;DP=2588;DP4=1239,1277,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.05955e-09;MQSB=0.999424;RPB=0.987195;SGB=71.3514;VDB=0.535571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2568-S.SNP.3:21771471 chr03:021771471 0 W/21771471-21771471 FN2568-S SNP C -> T AC=2;AN=198;BQB=0.568619;DP=4002;DP4=1778,1980,13,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.74386e-11;MQSB=0.733507;RPB=0.642074;SGB=54.5295;VDB=0.779209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.3:21775543 chr03:021775543 0 W/21775543-21775543 FN1065-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g39210 retrotransposon protein, putative, unclassified, expressed SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN785-S.SNP.3:21775921 chr03:021775921 0 W/21775921-21775921 FN785-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g39210 retrotransposon protein, putative, unclassified, expressed SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2719-S.SNP.3:21778063 chr03:021778063 0 W/21778063-21778063 FN2719-S SNP T -> A AC=1;AN=200;BQB=0.791401;DP=6878;DP4=3393,3044,10,6;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0138122;MQB=0.0932955;MQSB=0.000665933;RPB=0.564596;SGB=6.27959;VDB=0.325278;EFF=INTRON(MODIFIER||||651|LOC_Os03g39210|protein_coding|CODING|LOC_Os03g39210.1|1|1) FN1531-S.SNP.3:21778418 chr03:021778418 0 W/21778418-21778418 FN1531-S Single Base Substitution G-A INTRON HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN-173.SNP.3:21780022 chr03:021780022 0 W/21780022-21780022 FN-173 Single Base Substitution T-C INTERGENIC HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2281.SNP.3:21780113 chr03:021780113 0 W/21780113-21780113 FN2281 SNP C -> T AC=1;AN=192;BQB=0.236525;DP=4527;DP4=2159,2009,19,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.66326e-16;MQSB=0.850979;RPB=0.16152;SGB=32.3844;VDB=0.786156;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.3:21805581 chr03:021805581 0 W/21805581-21805581 FN820-S Single Base Substitution G-A INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN1034-S.SNP.3:21805686 chr03:021805686 0 W/21805686-21805686 FN1034-S Single Base Substitution C-T INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN815-S.SNP.3:21805895 chr03:021805895 0 W/21805895-21805895 FN815-S Single Base Substitution G-A INTERGENIC HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN415-S.SNP.3:21810632 chr03:021810632 0 W/21810632-21810632 FN415-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g39250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3859-S.SNP.3:21811511 chr03:021811511 0 W/21811511-21811511 FN3859-S SNP G -> C AC=1;AN=158;BQB=0.980528;DP=2400;DP4=1245,890,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.66634e-05;MQSB=0.780233;RPB=0.536833;SGB=23.9652;VDB=0.891275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.3:21812393 chr03:021812393 0 W/21812393-21812393 FN1274-S Single Base Substitution G-A INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1681-S.SNP.3:21813942 chr03:021813942 0 W/21813942-21813942 FN1681-S SNP C -> T AC=2;AN=188;BQB=0.148477;DP=1045;DP4=198,783,2,14;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=0.123227;MQSB=0.999988;RPB=0.45192;SGB=16.4024;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.3:21819939 chr03:021819939 0 W/21819939-21819939 FN2740-S SNP T -> A AC=1;AN=200;BQB=0.478441;DP=4555;DP4=2412,1937,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83128e-16;MQSB=0.917599;RPB=0.674772;SGB=79.9264;VDB=0.847324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.3:21819945 chr03:021819945 0 W/21819945-21819945 FN2740-S SNP A -> T AC=1;AN=200;BQB=0.198402;DP=4524;DP4=2399,1874,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77209e-14;MQSB=0.855077;RPB=0.187659;SGB=47.7211;VDB=0.639752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.3:21822869 chr03:021822869 0 W/21822869-21822869 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.0933923;DP=2998;DP4=1435,1447,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00100067;MQB=1.25473e-10;MQSB=0.371338;RPB=0.704588;SGB=28.3187;VDB=0.127019;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q1898*|2267|LOC_Os03g39284|protein_coding|CODING|LOC_Os03g39284.1|8|1);LOF=(LOC_Os03g39284|LOC_Os03g39284|1|1.00);NMD=(LOC_Os03g39284|LOC_Os03g39284|1|1.00) FN499-S.SNP.3:21827852 chr03:021827852 0 W/21827852-21827852 FN499-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g39284 retrotransposon protein, putative, unclassified, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN789-S.SNP.3:21837636 chr03:021837636 0 W/21837636-21837636 FN789-S Single Base Substitution A-T INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN3358-S.SNP.3:21841093 chr03:021841093 0 W/21841093-21841093 FN3358-S SNP A -> G AC=1;AN=184;BQB=0.904572;DP=2909;DP4=1453,1343,9,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08433e-07;MQSB=0.882618;RPB=0.842061;SGB=28.7043;VDB=0.505957;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.3:21842950 chr03:021842950 0 W/21842950-21842950 FN-184 Single Base Substitution G-A INTRON HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3853-S.SNP.3:21846200 chr03:021846200 0 W/21846200-21846200 FN3853-S SNP G -> A AC=1;AN=158;BQB=0.900878;DP=2820;DP4=1584,1112,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00035461;MQB=5.46137e-05;MQSB=1.37602e-21;RPB=0.828663;SGB=50.9207;VDB=0.981132;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.3:21851216 chr03:021851216 0 W/21851216-21851216 FN_815-4-1 Single Base Substitution C-T HET LOC_Os03g39330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN977-S.SNP.3:21854500 chr03:021854500 0 W/21854500-21854500 FN977-S Single Base Substitution A-G INTERGENIC HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1424-S.SNP.3:21858087 chr03:021858087 0 W/21858087-21858087 FN1424-S Single Base Substitution C-A INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN511-S.SNP.3:21858354 chr03:021858354 0 W/21858354-21858354 FN511-S Single Base Substitution T-G INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN2734-S.SNP.3:21858383 chr03:021858383 0 W/21858383-21858383 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.99063;DP=5281;DP4=2639,2370,25,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000189358;MQB=1.65748e-22;MQSB=0.989794;RPB=0.568862;SGB=89.4038;VDB=0.792205;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.3:21871447 chr03:021871447 0 W/21871447-21871447 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.732398;DP=2676;DP4=1243,1267,17,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.71091e-11;MQSB=0.773777;RPB=0.86033;SGB=74.5068;VDB=0.853391;EFF=INTRON(MODIFIER||||1618|LOC_Os03g39350|protein_coding|CODING|LOC_Os03g39350.1|6|1) FN434-S.SNP.3:21873157 chr03:021873157 0 W/21873157-21873157 FN434-S Single Base Substitution G-A INTRON HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN498-S.SNP.3:21874009 chr03:021874009 0 W/21874009-21874009 FN498-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g39350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2534-S.SNP.3:21878728 chr03:021878728 0 W/21878728-21878728 FN2534-S SNP T -> C AC=1;AN=198;BQB=0.995258;DP=4702;DP4=2026,2475,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000212675;MQB=2.21803e-06;MQSB=0.385327;RPB=0.438358;SGB=49.5489;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.3:21883221 chr03:021883221 0 W/21883221-21883221 FN1060-S Single Base Substitution T-G INTRON HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN491-S.SNP.3:21887325 chr03:021887325 0 W/21887325-21887325 FN491-S Single Base Substitution C-T INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN3849-S.SNP.3:21887990 chr03:021887990 0 W/21887990-21887990 FN3849-S SNP G -> T AC=1;AN=158;BQB=0.885869;DP=1611;DP4=832,686,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0806952;MQB=0.283428;MQSB=0.0217456;RPB=0.531336;SGB=29.5899;VDB=0.526163;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.3:21891183 chr03:021891183 0 W/21891183-21891183 FN453-S Single Base Substitution T-A INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-341.SNP.3:21897213 chr03:021897213 0 W/21897213-21897213 FN-341 Single Base Substitution T-C INTRON HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2289.SNP.3:21904340 chr03:021904340 0 W/21904340-21904340 FN2289 SNP A -> G AC=1;AN=192;BQB=0.620418;DP=5261;DP4=2421,2252,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.39743e-15;MQSB=0.954653;RPB=0.898365;SGB=-151.976;VDB=0.471418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.3:21906487 chr03:021906487 0 W/21906487-21906487 FN2779-S SNP C -> A AC=1;AN=198;BQB=0.432662;DP=4209;DP4=2054,1944,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000712758;MQB=1.66287e-07;MQSB=0.948068;RPB=0.8993;SGB=47.3393;VDB=0.776679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.3:21910480 chr03:021910480 0 W/21910480-21910480 FN2300 SNP C -> A AC=1;AN=192;BQB=0.285617;DP=4560;DP4=2222,2105,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23931e-08;MQSB=0.0874662;RPB=0.311612;SGB=76.5965;VDB=0.673997;EFF=UTR_5_PRIME(MODIFIER||2118||263|LOC_Os03g39432|protein_coding|CODING|LOC_Os03g39432.1|1|1) FN2128-S.SNP.3:21928067 chr03:021928067 0 W/21928067-21928067 FN2128-S SNP C -> T AC=1;AN=168;BQB=0.60854;DP=2217;DP4=963,1171,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.40419e-14;MQSB=0.81474;RPB=0.710646;SGB=44.0621;VDB=0.284842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G36R|120|LOC_Os03g39460|protein_coding|CODING|LOC_Os03g39460.1|2|1) FN2128-S.SNP.3:21928069 chr03:021928069 0 W/21928069-21928069 FN2128-S SNP C -> T AC=1;AN=168;BQB=0.947067;DP=2211;DP4=977,1158,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35565e-12;MQSB=0.703083;RPB=0.846555;SGB=17.068;VDB=0.442464;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G35D|120|LOC_Os03g39460|protein_coding|CODING|LOC_Os03g39460.1|2|1) FN2196-S.SNP.3:21929921 chr03:021929921 0 W/21929921-21929921 FN2196-S SNP A -> C AC=1;AN=190;BQB=0.137998;DP=4879;DP4=2410,2072,13,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.67599e-15;MQSB=0.944747;RPB=0.824007;SGB=-4.91383;VDB=0.861836;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.3:21931164 chr03:021931164 0 W/21931164-21931164 FN-206 Single Base Substitution G-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3358-S.SNP.3:21933906 chr03:021933906 0 W/21933906-21933906 FN3358-S SNP C -> A AC=1;AN=184;BQB=0.712501;DP=3006;DP4=1505,1390,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06269e-06;MQSB=0.560732;RPB=0.993066;SGB=25.7969;VDB=0.982218;EFF=INTRON(MODIFIER||||112|LOC_Os03g39490|protein_coding|CODING|LOC_Os03g39490.1|1|1) FN3632-S.SNP.3:21942043 chr03:021942043 0 W/21942043-21942043 FN3632-S SNP G -> T AC=1;AN=190;BQB=0.623381;DP=3110;DP4=1426,1571,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.50389e-07;MQSB=0.687902;RPB=0.187698;SGB=26.2136;VDB=0.684447;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.3:21949846 chr03:021949846 0 W/21949846-21949846 FN514-S Single Base Substitution C-A INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3758-S.SNP.3:21952716 chr03:021952716 0 W/21952716-21952716 FN3758-S SNP C -> G AC=1;AN=190;BQB=0.964658;DP=2821;DP4=1573,1151,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22025e-06;MQSB=0.757549;RPB=0.868302;SGB=35.4339;VDB=0.864215;EFF=INTRON(MODIFIER||||582|LOC_Os03g39520|protein_coding|CODING|LOC_Os03g39520.1|1|1) FN2692-S.SNP.3:21965562 chr03:021965562 0 W/21965562-21965562 FN2692-S SNP T -> C AC=1;AN=200;BQB=0.85639;DP=4825;DP4=2054,2534,25,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10983e-20;MQSB=0.993871;RPB=0.814153;SGB=39.9882;VDB=0.0730198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.3:21969250 chr03:021969250 0 W/21969250-21969250 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.0360502;DP=2839;DP4=1228,1499,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.486411;MQSB=0.136893;RPB=0.807016;SGB=28.8977;VDB=0.924225;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.3:21971107 chr03:021971107 0 W/21971107-21971107 FN829-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g39570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN829-S.SNP.3:21971108 chr03:021971108 0 W/21971108-21971108 FN829-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g39570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN3057-S.SNP.3:21983014 chr03:021983014 0 W/21983014-21983014 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.999558;DP=4323;DP4=1913,2304,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.236873;MQB=0.484457;MQSB=5.16779e-29;RPB=0.998689;SGB=42.7914;VDB=0.474291;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S199|1431|LOC_Os03g39590|protein_coding|CODING|LOC_Os03g39590.1|1|1) FN2666-S.SNP.3:21987387 chr03:021987387 0 W/21987387-21987387 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.311076;DP=4555;DP4=2206,2153,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219539;MQB=4.81998e-08;MQSB=0.891635;RPB=0.810879;SGB=26.8797;VDB=0.998519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.3:21988069 chr03:021988069 0 W/21988069-21988069 FN2723-S SNP G -> T AC=2;AN=200;BQB=0.834319;DP=4936;DP4=2189,2546,11,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00182334;MQB=1.17694e-12;MQSB=0.998258;RPB=0.171197;SGB=114.132;VDB=0.227681;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.3:21988965 chr03:021988965 0 W/21988965-21988965 FN4020-S SNP C -> A AC=1;AN=168;BQB=0.311241;DP=2684;DP4=1388,1134,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000745156;MQB=0.00182813;MQSB=0.0214504;RPB=0.904573;SGB=27.8864;VDB=0.728489;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.3:21990078 chr03:021990078 0 W/21990078-21990078 FN4160-S SNP C -> T AC=1;AN=170;BQB=0.929259;DP=2526;DP4=1260,1207,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000395883;MQB=8.07822e-07;MQSB=0.98663;RPB=0.999978;SGB=47.8722;VDB=0.331213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.3:21991024 chr03:021991024 0 W/21991024-21991024 FN3934-S SNP T -> A AC=2;AN=158;BQB=0.999485;DP=2399;DP4=1185,1127,14,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.00454e-15;MQSB=0.203611;RPB=0.324076;SGB=134.456;VDB=0.493212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T254S|397|LOC_Os03g39598|protein_coding|CODING|LOC_Os03g39598.1|4|1) FN1389-S.SNP.3:21991446 chr03:021991446 0 W/21991446-21991446 FN1389-S Single Base Substitution C-G INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN937-S.SNP.3:22000595 chr03:022000595 0 W/22000595-22000595 FN937-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g39610 chlorophyll A-B binding protein, putative, expressed SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN1114-S.SNP.3:22001628 chr03:022001628 0 W/22001628-22001628 FN1114-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3463-S.SNP.3:22002864 chr03:022002864 0 W/22002864-22002864 FN3463-S SNP T -> C AC=2;AN=184;BQB=0.683372;DP=3314;DP4=1425,1630,17,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.63845e-18;MQSB=0.949723;RPB=0.577562;SGB=38.7599;VDB=0.197529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.3:22008717 chr03:022008717 0 W/22008717-22008717 FN2370 SNP A -> C AC=1;AN=192;BQB=0.994349;DP=3931;DP4=1544,1835,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.72741e-10;MQSB=0.23521;RPB=0.999978;SGB=-13.0756;VDB=0.504806;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgC|R76|197|LOC_Os03g39620|protein_coding|CODING|LOC_Os03g39620.1|2|1) FN727-S.SNP.3:22018993 chr03:022018993 0 W/22018993-22018993 FN727-S Single Base Substitution T-C INTRON HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN727-S.SNP.3:22018996 chr03:022018996 0 W/22018996-22018996 FN727-S Single Base Substitution C-A INTRON HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN2140-S.SNP.3:22027551 chr03:022027551 0 W/22027551-22027551 FN2140-S SNP T -> G AC=1;AN=168;BQB=0.275258;DP=3726;DP4=1825,1854,11,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.54179e-13;MQSB=0.968269;RPB=0.999916;SGB=22.7913;VDB=0.234861;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acC|T232|679|LOC_Os03g39640|protein_coding|CODING|LOC_Os03g39640.2|3|1) FN623-S.SNP.3:22030675 chr03:022030675 0 W/22030675-22030675 FN623-S Single Base Substitution T-G INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1423-S.SNP.3:22032938 chr03:022032938 0 W/22032938-22032938 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3823-S.SNP.3:22032947 chr03:022032947 0 W/22032947-22032947 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.692802;DP=2394;DP4=1128,1114,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000417711;MQB=8.79398e-05;MQSB=0.30408;RPB=0.184165;SGB=53.6492;VDB=0.0903004;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.3:22034501 chr03:022034501 0 W/22034501-22034501 FN244-S Single Base Substitution C-A INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN530-S.SNP.3:22038798 chr03:022038798 0 W/22038798-22038798 FN530-S Single Base Substitution G-T INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN799-S.SNP.3:22039075 chr03:022039075 0 W/22039075-22039075 FN799-S Single Base Substitution C-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN2469.SNP.3:22039312 chr03:022039312 0 W/22039312-22039312 FN2469 SNP T -> C AC=1;AN=200;BQB=0.383876;DP=4882;DP4=2386,2193,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96298e-09;MQSB=0.97921;RPB=0.337267;SGB=42.5108;VDB=0.929653;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.3:22040509 chr03:022040509 0 W/22040509-22040509 FN758-S Single Base Substitution G-A INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN1249-S.SNP.3:22047798 chr03:022047798 0 W/22047798-22047798 FN1249-S Single Base Substitution C-T INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN916-S.SNP.3:22048871 chr03:022048871 0 W/22048871-22048871 FN916-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN916-S.SNP.3:22048872 chr03:022048872 0 W/22048872-22048872 FN916-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os03g39650 cytochrome P450, putative, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN916-S.SNP.3:22048873 chr03:022048873 0 W/22048873-22048873 FN916-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g39650 cytochrome P450, putative, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2188-S.SNP.3:22050505 chr03:022050505 0 W/22050505-22050505 FN2188-S SNP A -> G AC=2;AN=190;BQB=0.646496;DP=4876;DP4=2380,2143,30,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.36427e-26;MQSB=0.98452;RPB=0.816868;SGB=254.02;VDB=0.349645;EFF=INTRON(MODIFIER||||542|LOC_Os03g39650|protein_coding|CODING|LOC_Os03g39650.1|2|1) FN2713-S.SNP.3:22055331 chr03:022055331 0 W/22055331-22055331 FN2713-S SNP A -> T AC=1;AN=200;BQB=0.999882;DP=4842;DP4=2440,2150,19,13;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0489467;MQB=0.110494;MQSB=6.74612e-24;RPB=0.594989;SGB=31.9623;VDB=0.871712;EFF=INTRON(MODIFIER||||95|LOC_Os03g39655|protein_coding|CODING|LOC_Os03g39655.1|1|1) FN2713-S.SNP.3:22057710 chr03:022057710 0 W/22057710-22057710 FN2713-S SNP G -> C AC=1;AN=200;BQB=0.306527;DP=4567;DP4=2306,1978,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.0995e-10;MQSB=0.950201;RPB=0.305284;SGB=39.9056;VDB=0.641425;EFF=INTRON(MODIFIER||||290|LOC_Os03g39660|protein_coding|CODING|LOC_Os03g39660.1|1|1) FN1109-S.SNP.3:22059287 chr03:022059287 0 W/22059287-22059287 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN409-S.SNP.3:22061735 chr03:022061735 0 W/22061735-22061735 FN409-S Single Base Substitution G-A INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2379.SNP.3:22062447 chr03:022062447 0 W/22062447-22062447 FN2379 SNP C -> T AC=1;AN=192;BQB=0.785161;DP=4780;DP4=2268,2144,23,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209205;MQB=8.11849e-20;MQSB=0.445943;RPB=0.317007;SGB=41.7705;VDB=0.877695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.3:22079377 chr03:022079377 0 W/22079377-22079377 FN1318-S Single Base Substitution A-G INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN917-S.SNP.3:22079660 chr03:022079660 0 W/22079660-22079660 FN917-S Single Base Substitution G-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3302-S.SNP.3:22079849 chr03:022079849 0 W/22079849-22079849 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.929744;DP=2593;DP4=1277,1241,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.97645e-06;MQSB=0.985395;RPB=0.969537;SGB=35.1773;VDB=0.615174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.3:22080501 chr03:022080501 0 W/22080501-22080501 FN3311-S Single Base Substitution C-T INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3431-S.SNP.3:22081943 chr03:022081943 0 W/22081943-22081943 FN3431-S SNP T -> C AC=1;AN=184;BQB=0.92009;DP=2858;DP4=1320,1406,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22402e-07;MQSB=0.996819;RPB=0.0402175;SGB=57.786;VDB=0.0627983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.3:22093628 chr03:022093628 0 W/22093628-22093628 FN2218-S SNP G -> C AC=2;AN=190;BQB=0.918974;DP=4447;DP4=2316,1891,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.62712e-24;MQSB=0.691858;RPB=0.799407;SGB=185.712;VDB=0.367218;EFF=INTRON(MODIFIER||||522|LOC_Os03g39710|protein_coding|CODING|LOC_Os03g39710.1|2|1) FN2218-S.SNP.3:22093632 chr03:022093632 0 W/22093632-22093632 FN2218-S SNP A -> T AC=2;AN=190;BQB=0.890852;DP=4451;DP4=2240,1714,23,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90382e-20;MQSB=0.849168;RPB=0.700692;SGB=44.5119;VDB=0.197944;EFF=INTRON(MODIFIER||||522|LOC_Os03g39710|protein_coding|CODING|LOC_Os03g39710.1|2|1) FN2768-S.SNP.3:22097952 chr03:022097952 0 W/22097952-22097952 FN2768-S SNP G -> T AC=1;AN=198;BQB=0.58138;DP=4061;DP4=1951,1856,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24103e-14;MQSB=0.97641;RPB=0.437645;SGB=44.9151;VDB=0.888138;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.3:22122921 chr03:022122921 0 W/22122921-22122921 FN1252-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1118-S.SNP.3:22128158 chr03:022128158 0 W/22128158-22128158 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN895-S.SNP.3:22129614 chr03:022129614 0 W/22129614-22129614 FN895-S Single Base Substitution C-T INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1250-S.SNP.3:22131864 chr03:022131864 0 W/22131864-22131864 FN1250-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2536-S.SNP.3:22134400 chr03:022134400 0 W/22134400-22134400 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.878686;DP=3733;DP4=1696,1836,3,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000535762;MQB=0.00109145;MQSB=0.880849;RPB=0.991901;SGB=17.3903;VDB=0.427066;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L560|795|LOC_Os03g39780|protein_coding|CODING|LOC_Os03g39780.1|4|1) FN2464.SNP.3:22134483 chr03:022134483 0 W/22134483-22134483 FN2464 SNP A -> G AC=1;AN=200;BQB=0.514613;DP=4274;DP4=1835,1688,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.71496e-11;MQSB=0.999959;RPB=0.165986;SGB=-68.0744;VDB=0.307051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D588G|795|LOC_Os03g39780|protein_coding|CODING|LOC_Os03g39780.1|4|1) FN1631-S.SNP.3:22135528 chr03:022135528 0 W/22135528-22135528 FN1631-S Single Base Substitution C-A INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3345-S.SNP.3:22141554 chr03:022141554 0 W/22141554-22141554 FN3345-S SNP G -> C AC=1;AN=184;BQB=0.883252;DP=2816;DP4=1375,1359,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03705e-07;MQSB=0.916525;RPB=0.813335;SGB=57.786;VDB=0.822094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.3:22149135 chr03:022149135 0 W/22149135-22149135 FN1525-S Single Base Substitution C-T INTRON HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3790-S.SNP.3:22165228 chr03:022165228 0 W/22165228-22165228 FN3790-S SNP A -> C AC=1;AN=190;BQB=0.530657;DP=2745;DP4=1128,1497,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.43121e-11;MQSB=0.95101;RPB=0.255608;SGB=33.8752;VDB=0.757374;EFF=INTRON(MODIFIER||||109|LOC_Os03g39860|protein_coding|CODING|LOC_Os03g39860.2|3|1),INTRON(MODIFIER||||148|LOC_Os03g39860|protein_coding|CODING|LOC_Os03g39860.1|2|1) FN1762-S.SNP.3:22170591 chr03:022170591 0 W/22170591-22170591 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.126355;DP=2505;DP4=821,1644,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.1843e-06;MQSB=0.819663;RPB=0.962286;SGB=-79.0704;VDB=0.786841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.3:22170706 chr03:022170706 0 W/22170706-22170706 FN3039-S SNP T -> C AC=1;AN=184;BQB=0.761854;DP=3364;DP4=1870,1278,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2365e-09;MQSB=0.876757;RPB=0.187719;SGB=23.2751;VDB=0.234625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.3:22178010 chr03:022178010 0 W/22178010-22178010 FN2562-S SNP A -> T AC=1;AN=198;BQB=0.635976;DP=3626;DP4=1681,1657,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00312e-12;MQSB=0.972337;RPB=0.784591;SGB=-10.2651;VDB=0.665494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.3:22191657 chr03:022191657 0 W/22191657-22191657 FN2449 SNP C -> A AC=1;AN=200;BQB=0.959876;DP=4315;DP4=1881,2150,12,16;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0329085;MQB=0.000708241;MQSB=0.00503515;RPB=0.38282;SGB=25.5416;VDB=0.355604;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A1408D|1911|LOC_Os03g39920|protein_coding|CODING|LOC_Os03g39920.1|3|1) FN937-S.SNP.3:22192313 chr03:022192313 0 W/22192313-22192313 FN937-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g39920 retrotransposon protein, putative, unclassified, expressed SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN3447-S.SNP.3:22193108 chr03:022193108 0 W/22193108-22193108 FN3447-S SNP G -> A AC=1;AN=184;BQB=0.888549;DP=5852;DP4=1687,3984,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.253759;MQB=0.0139507;MQSB=0;RPB=0.435793;SGB=53.2642;VDB=0.687739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1892S|1911|LOC_Os03g39920|protein_coding|CODING|LOC_Os03g39920.1|3|1) FN3542-S.SNP.3:22195886 chr03:022195886 0 W/22195886-22195886 FN3542-S SNP G -> A AC=1;AN=188;BQB=0.80872;DP=4158;DP4=2121,1945,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00793651;MQB=0.000463372;MQSB=0.0285137;RPB=0.824751;SGB=8.62479;VDB=0.654423;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN-345 Single Base Substitution C-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1158-S.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN1158-S Single Base Substitution C-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2361.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN2361 SNP C -> A AC=2;AN=192;BQB=0.000276324;DP=4832;DP4=2437,1978,20,16;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.00765728;MQB=0.00408818;MQSB=5.03601e-12;RPB=0.909666;SGB=77.6365;VDB=0.897349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN2486 SNP C -> A AC=1;AN=200;BQB=0.983941;DP=3460;DP4=1816,1331,14,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00606936;MQB=0.0297951;MQSB=0.00113967;RPB=0.842016;SGB=37.3004;VDB=0.0103978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN2791-S SNP C -> A AC=2;AN=198;BQB=0.55925;DP=3438;DP4=1703,1453,20,9;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.004363;MQB=0.000411817;MQSB=4.31866e-09;RPB=0.661738;SGB=127.666;VDB=0.0860584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN3345-S SNP C -> A AC=1;AN=184;BQB=0.998175;DP=3234;DP4=1678,1452,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00742115;MQB=0.266861;MQSB=0.0657675;RPB=0.999365;SGB=39.699;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN4095-S SNP C -> A AC=2;AN=182;BQB=0.878015;DP=2509;DP4=1271,1149,12,8;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0.00557991;MQB=0.0698054;MQSB=0.007633;RPB=0.0848524;SGB=84.7091;VDB=0.0925191;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.3:22196267 chr03:022196267 0 W/22196267-22196267 FN509-S Single Base Substitution C-A INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3566-S.SNP.3:22197217 chr03:022197217 0 W/22197217-22197217 FN3566-S SNP G -> A AC=1;AN=188;BQB=0.443313;DP=4229;DP4=1700,2446,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00141878;MQB=1.89978e-13;MQSB=0.992005;RPB=0.824876;SGB=98.9552;VDB=0.235068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.3:22197218 chr03:022197218 0 W/22197218-22197218 FN3566-S SNP C -> A AC=1;AN=188;BQB=0.832532;DP=4233;DP4=1707,2443,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.0011812;MQB=4.26143e-14;MQSB=0.99981;RPB=0.745452;SGB=94.4119;VDB=0.346439;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.3:22210103 chr03:022210103 0 W/22210103-22210103 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN4163-S.SNP.3:22228125 chr03:022228125 0 W/22228125-22228125 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.990463;DP=2206;DP4=915,1233,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.00121e-06;MQSB=0.704201;RPB=0.328903;SGB=43.4296;VDB=0.0766076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.3:22239031 chr03:022239031 0 W/22239031-22239031 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.940283;DP=3275;DP4=1653,1484,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.68765e-07;MQSB=0.87133;RPB=0.698145;SGB=44.2207;VDB=0.941837;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.3:22239683 chr03:022239683 0 W/22239683-22239683 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.911734;DP=3098;DP4=1345,1643,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32268e-09;MQSB=0.818408;RPB=0.639114;SGB=62.3078;VDB=0.200918;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R76|176|LOC_Os03g40030|protein_coding|CODING|LOC_Os03g40030.1|1|1) FN1315-S.SNP.3:22251344 chr03:022251344 0 W/22251344-22251344 FN1315-S Single Base Substitution T-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1270-S.SNP.3:22259667 chr03:022259667 0 W/22259667-22259667 FN1270-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1658-S.SNP.3:22270275 chr03:022270275 0 W/22270275-22270275 FN1658-S SNP T -> A AC=2;AN=188;BQB=0.917194;DP=1819;DP4=880,865,7,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.33794e-07;MQSB=0.910227;RPB=0.804629;SGB=-35.9944;VDB=0.308334;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.3:22270283 chr03:022270283 0 W/22270283-22270283 FN1014-S Single Base Substitution T-A INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN4235-S.SNP.3:22278189 chr03:022278189 0 W/22278189-22278189 FN4235-S SNP G -> A AC=1;AN=170;BQB=0.984305;DP=2244;DP4=1192,971,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=3.86644e-08;MQSB=0.000196975;RPB=0.911877;SGB=38.3207;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.3:22292358 chr03:022292358 0 W/22292358-22292358 FN2648-S SNP C -> A AC=1;AN=200;BQB=0.406219;DP=4225;DP4=2167,1831,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.82166e-15;MQSB=0.895674;RPB=0.139968;SGB=104.921;VDB=0.843918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D69Y|929|LOC_Os03g40110|protein_coding|CODING|LOC_Os03g40110.1|1|1) FN2138-S.SNP.3:22298624 chr03:022298624 0 W/22298624-22298624 FN2138-S SNP C -> A AC=2;AN=168;BQB=0.692676;DP=2345;DP4=1054,1234,16,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.71722e-14;MQSB=0.765576;RPB=0.973357;SGB=22.7913;VDB=0.518139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S282I|292|LOC_Os03g40130|protein_coding|CODING|LOC_Os03g40130.1|2|1) FN2138-S.SNP.3:22298626 chr03:022298626 0 W/22298626-22298626 FN2138-S SNP G -> A AC=2;AN=168;BQB=0.939359;DP=2340;DP4=1055,1232,16,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.19711e-13;MQSB=0.811917;RPB=0.955356;SGB=53.7853;VDB=0.680073;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S281|292|LOC_Os03g40130|protein_coding|CODING|LOC_Os03g40130.1|2|1) FN796-S.SNP.3:22301972 chr03:022301972 0 W/22301972-22301972 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN796-S.SNP.3:22301974 chr03:022301974 0 W/22301974-22301974 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN1501-S.SNP.3:22322902 chr03:022322902 0 W/22322902-22322902 FN1501-S Single Base Substitution C-A INTERGENIC Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-154.SNP.3:22329378 chr03:022329378 0 W/22329378-22329378 FN-154 Single Base Substitution T-C INTERGENIC HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. W278-3-1.SNP.3:22331715 chr03:022331715 0 W/22331715-22331715 W278-3-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1202-S.SNP.3:22335476 chr03:022335476 0 W/22335476-22335476 FN1202-S Single Base Substitution T-C INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN890-S.SNP.3:22345216 chr03:022345216 0 W/22345216-22345216 FN890-S Single Base Substitution G-C INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN519-S.SNP.3:22350983 chr03:022350983 0 W/22350983-22350983 FN519-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN1257-S.SNP.3:22357143 chr03:022357143 0 W/22357143-22357143 FN1257-S Single Base Substitution C-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN442-S.SNP.3:22357240 chr03:022357240 0 W/22357240-22357240 FN442-S Single Base Substitution A-G INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN2439.SNP.3:22361392 chr03:022361392 0 W/22361392-22361392 FN2439 SNP C -> A AC=2;AN=200;BQB=0.533287;DP=4569;DP4=1908,2422,10,5;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.55851e-08;MQSB=0.647944;RPB=0.726151;SGB=63.4749;VDB=0.471439;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P42|112|LOC_Os03g40230|protein_coding|CODING|LOC_Os03g40230.1|2|1) FN2649-S.SNP.3:22362037 chr03:022362037 0 W/22362037-22362037 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.859022;DP=4757;DP4=2390,1984,19,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.99346e-09;MQSB=0.863331;RPB=0.96611;SGB=-10.0844;VDB=0.921551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.3:22362433 chr03:022362433 0 W/22362433-22362433 FN1379-S Single Base Substitution A-T INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN875-S.SNP.3:22366812 chr03:022366812 0 W/22366812-22366812 FN875-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN2110-S.SNP.3:22366843 chr03:022366843 0 W/22366843-22366843 FN2110-S SNP G -> A AC=1;AN=168;BQB=0.284542;DP=3245;DP4=1548,1630,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00154083;MQB=4.64519e-07;MQSB=0.962432;RPB=0.879803;SGB=-95.493;VDB=0.0409426;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.3:22370391 chr03:022370391 0 W/22370391-22370391 FN1579-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN421-S.SNP.3:22370702 chr03:022370702 0 W/22370702-22370702 FN421-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g40250 Leucine Rich Repeat family protein, expressed SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1326-S.SNP.3:22372794 chr03:022372794 0 W/22372794-22372794 FN1326-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2734-S.SNP.3:22374396 chr03:022374396 0 W/22374396-22374396 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.594264;DP=5319;DP4=2525,2465,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94756e-11;MQSB=0.976528;RPB=0.660174;SGB=-11.2947;VDB=0.698216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G85E|479|LOC_Os03g40260|protein_coding|CODING|LOC_Os03g40260.1|3|1),SPLICE_SITE_REGION(LOW||||479|LOC_Os03g40260|protein_coding|CODING|LOC_Os03g40260.1|3|1) FN-76.SNP.3:22376541 chr03:022376541 0 W/22376541-22376541 FN-76 Single Base Substitution G-A INTRON HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-105.SNP.3:22384978 chr03:022384978 0 W/22384978-22384978 FN-105 Single Base Substitution G-A INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN812-S.SNP.3:22386590 chr03:022386590 0 W/22386590-22386590 FN812-S Single Base Substitution C-T INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN-234.SNP.3:22394952 chr03:022394952 0 W/22394952-22394952 FN-234 Single Base Substitution C-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN389-S.SNP.3:22401245 chr03:022401245 0 W/22401245-22401245 FN389-S Single Base Substitution T-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2386.SNP.3:22405400 chr03:022405400 0 W/22405400-22405400 FN2386 SNP G -> A AC=1;AN=192;BQB=0.492089;DP=4671;DP4=2221,2113,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.46925e-07;MQSB=0.930883;RPB=0.852239;SGB=16.0922;VDB=0.0848712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.3:22406050 chr03:022406050 0 W/22406050-22406050 FN2353 SNP T -> C AC=2;AN=192;BQB=0.964073;DP=4838;DP4=2117,2381,14,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.69064e-16;MQSB=0.948441;RPB=0.956536;SGB=96.8096;VDB=0.798623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.3:22407202 chr03:022407202 0 W/22407202-22407202 FN2296 SNP G -> A AC=1;AN=192;BQB=0.438322;DP=4985;DP4=2255,2471,16,20;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.20626e-09;MQSB=2.99238e-05;RPB=0.930182;SGB=-165.718;VDB=0.222501;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.3:22411986 chr03:022411986 0 W/22411986-22411986 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.952523;DP=2879;DP4=1360,1396,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.53332e-09;MQSB=0.943304;RPB=0.964025;SGB=58.2031;VDB=0.620629;EFF=INTERGENIC(MODIFIER||||||||||1) FN-20.SNP.3:22419102 chr03:022419102 0 W/22419102-22419102 FN-20 Single Base Substitution A-T INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1388-S.SNP.3:22419361 chr03:022419361 0 W/22419361-22419361 FN1388-S Single Base Substitution A-T INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1086-S.SNP.3:22420180 chr03:022420180 0 W/22420180-22420180 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3659-S.SNP.3:22420424 chr03:022420424 0 W/22420424-22420424 FN3659-S SNP T -> C AC=1;AN=190;BQB=0.955905;DP=2762;DP4=1440,1245,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000206234;MQSB=0.896899;RPB=0.916679;SGB=30.8803;VDB=0.811382;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.3:22420635 chr03:022420635 0 W/22420635-22420635 FN276-S Single Base Substitution A-T INTERGENIC HOMO SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-11.SNP.3:22428164 chr03:022428164 0 W/22428164-22428164 FN-11 Single Base Substitution A-G INTERGENIC Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3567-S.SNP.3:22429560 chr03:022429560 0 W/22429560-22429560 FN3567-S SNP C -> G AC=1;AN=188;BQB=0.947482;DP=2857;DP4=1113,1582,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.00225442;MQSB=0.137904;RPB=0.869109;SGB=8.62479;VDB=0.712919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.3:22432170 chr03:022432170 0 W/22432170-22432170 FN2081-S SNP G -> A AC=2;AN=168;BQB=0.999987;DP=3078;DP4=1350,1668,19,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.11301e-23;MQSB=0.977705;RPB=0.999777;SGB=39.9611;VDB=0.821711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.3:22432392 chr03:022432392 0 W/22432392-22432392 FN3326-S SNP T -> C AC=1;AN=184;BQB=0.637159;DP=3896;DP4=1989,1705,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.6446e-08;MQSB=0.999973;RPB=0.969052;SGB=2.23696;VDB=0.464601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.3:22433082 chr03:022433082 0 W/22433082-22433082 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3970-S.SNP.3:22438069 chr03:022438069 0 W/22438069-22438069 FN3970-S SNP A -> T AC=1;AN=168;BQB=0.973053;DP=2681;DP4=1366,1230,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.39471e-05;MQSB=0.0556151;RPB=0.967999;SGB=21.0249;VDB=0.660946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.3:22438074 chr03:022438074 0 W/22438074-22438074 FN3970-S SNP G -> T AC=1;AN=168;BQB=0.981468;DP=2661;DP4=1367,1207,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.48888e-05;MQSB=0.00810137;RPB=0.987518;SGB=21.0249;VDB=0.682146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.3:22438855 chr03:022438855 0 W/22438855-22438855 FN1666-S SNP C -> T AC=1;AN=188;BQB=0.441028;DP=3395;DP4=1314,2018,8,22;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00530191;MQB=0.116001;MQSB=0.945947;RPB=0.303587;SGB=-76.4696;VDB=0.596189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.3:22445297 chr03:022445297 0 W/22445297-22445297 FN2295 SNP T -> A AC=1;AN=192;BQB=0.994658;DP=4683;DP4=2036,2266,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.44798e-14;MQSB=0.816662;RPB=0.263482;SGB=75.4235;VDB=0.223797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.3:22445298 chr03:022445298 0 W/22445298-22445298 FN2295 SNP T -> A AC=1;AN=192;BQB=0.998719;DP=4684;DP4=2090,2269,9,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09237e-13;MQSB=0.542342;RPB=0.360029;SGB=49.4287;VDB=0.194764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.3:22457513 chr03:022457513 0 W/22457513-22457513 FN2309 SNP A -> G AC=1;AN=192;BQB=0.969804;DP=4578;DP4=2276,2073,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.77091e-09;MQSB=0.985995;RPB=0.905517;SGB=7.3548;VDB=0.616359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.3:22473199 chr03:022473199 0 W/22473199-22473199 FN2460 SNP G -> T AC=1;AN=200;BQB=0.310785;DP=5321;DP4=2957,2022,12,10;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.118775;MQB=0.259722;MQSB=0;RPB=0.609955;SGB=69.1109;VDB=0.252821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.3:22477466 chr03:022477466 0 W/22477466-22477466 FN1317-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g40460 expressed protein SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. W278-3-1.SNP.3:22478406 chr03:022478406 0 W/22478406-22478406 W278-3-1 Single Base Substitution C-A INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2122-S.SNP.3:22478851 chr03:022478851 0 W/22478851-22478851 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.000600304;DP=2156;DP4=1013,1059,19,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.576981;MQSB=0.20309;RPB=0.119;SGB=-335.313;VDB=0.0167446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3728-S.SNP.3:22479548 chr03:022479548 0 W/22479548-22479548 FN3728-S SNP C -> T AC=1;AN=190;BQB=0.743173;DP=2325;DP4=1305,935,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01701e-05;MQSB=0.984777;RPB=0.969427;SGB=21.8853;VDB=0.895422;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.3:22486100 chr03:022486100 0 W/22486100-22486100 FN627-S Single Base Substitution G-A INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN_N1-150-1.SNP.3:22486587 chr03:022486587 0 W/22486587-22486587 FN_N1-150-1 Single Base Substitution C-G Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2673-S.SNP.3:22486977 chr03:022486977 0 W/22486977-22486977 FN2673-S SNP G -> C AC=1;AN=200;BQB=0.945776;DP=5091;DP4=2044,2724,8,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57101e-17;MQSB=0.853065;RPB=0.0362559;SGB=97.9523;VDB=0.114849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.3:22499969 chr03:022499969 0 W/22499969-22499969 FN2408 SNP C -> T AC=1;AN=200;BQB=0.782728;DP=3948;DP4=2047,1720,4,7;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0111449;MQB=0.479548;MQSB=0;RPB=0.998197;SGB=45.0543;VDB=0.927044;EFF=INTRON(MODIFIER||||1657|LOC_Os03g40480|protein_coding|CODING|LOC_Os03g40480.1|3|1) FN723-S.SNP.3:22506014 chr03:022506014 0 W/22506014-22506014 FN723-S Single Base Substitution T-C INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2791-S.SNP.3:22509174 chr03:022509174 0 W/22509174-22509174 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.957626;DP=3959;DP4=2095,1684,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.65047e-11;MQSB=0.377621;RPB=0.971378;SGB=81.7147;VDB=0.89413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.3:22516289 chr03:022516289 0 W/22516289-22516289 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.923381;DP=2282;DP4=1086,1118,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0241017;MQB=0.00140335;MQSB=0.024608;RPB=0.409383;SGB=29.5899;VDB=0.205158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.3:22517709 chr03:022517709 0 W/22517709-22517709 FN1286-S Single Base Substitution G-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN-330.SNP.3:22521558 chr03:022521558 0 W/22521558-22521558 FN-330 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g40510 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN2182-S.SNP.3:22522350 chr03:022522350 0 W/22522350-22522350 FN2182-S SNP C -> A AC=1;AN=190;BQB=0.972124;DP=5441;DP4=2480,2652,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0134167;MQB=0.000601866;MQSB=6.67053e-33;RPB=0.422037;SGB=82.301;VDB=0.276972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.3:22523883 chr03:022523883 0 W/22523883-22523883 FN-82 Single Base Substitution A-T INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN4204-S.SNP.3:22525477 chr03:022525477 0 W/22525477-22525477 FN4204-S SNP A -> G AC=1;AN=170;BQB=0.872947;DP=1889;DP4=855,934,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.34141e-08;MQSB=0.952018;RPB=0.769888;SGB=31.4354;VDB=0.372438;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.3:22526752 chr03:022526752 0 W/22526752-22526752 FN3332-S SNP T -> A AC=2;AN=184;BQB=0.768309;DP=2774;DP4=1505,1148,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06619e-18;MQSB=0.957052;RPB=0.999998;SGB=99.14;VDB=0.326429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.3:22526753 chr03:022526753 0 W/22526753-22526753 FN3332-S SNP G -> T AC=2;AN=184;BQB=0.252991;DP=2770;DP4=1515,1139,20,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.18398e-20;MQSB=0.968265;RPB=0.994445;SGB=68.6673;VDB=0.360091;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.3:22530776 chr03:022530776 0 W/22530776-22530776 FN4122-S SNP A -> G AC=1;AN=182;BQB=0.999689;DP=2537;DP4=1144,1311,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000394166;MQB=9.84651e-10;MQSB=0.93065;RPB=0.938618;SGB=66.6657;VDB=0.111079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.3:22532579 chr03:022532579 0 W/22532579-22532579 FN2113-S SNP T -> C AC=1;AN=168;BQB=0.398667;DP=3969;DP4=1908,2002,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.73708e-13;MQSB=0.984831;RPB=0.940285;SGB=-74.3449;VDB=0.844085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.3:22533267 chr03:022533267 0 W/22533267-22533267 FN1301-S Single Base Substitution G-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4117-S.SNP.3:22534334 chr03:022534334 0 W/22534334-22534334 FN4117-S SNP G -> T AC=1;AN=182;BQB=0.959741;DP=2357;DP4=900,1349,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.20005e-06;MQSB=0.98911;RPB=0.657265;SGB=39.6007;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.3:22536250 chr03:022536250 0 W/22536250-22536250 FN852-S Single Base Substitution C-T INTERGENIC HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN-290.SNP.3:22537409 chr03:022537409 0 W/22537409-22537409 FN-290 Single Base Substitution C-G INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3723-S.SNP.3:22551117 chr03:022551117 0 W/22551117-22551117 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.960117;DP=2993;DP4=1592,1286,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.51999e-07;MQSB=0.980552;RPB=0.668352;SGB=25.439;VDB=0.696714;EFF=INTRON(MODIFIER||||589|LOC_Os03g40550|protein_coding|CODING|LOC_Os03g40550.1|4|1) FN2104-S.SNP.3:22551285 chr03:022551285 0 W/22551285-22551285 FN2104-S SNP C -> T AC=1;AN=168;BQB=0.400992;DP=4171;DP4=1995,2099,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29937e-07;MQSB=0.932307;RPB=0.979604;SGB=-66.4989;VDB=0.286153;EFF=INTRON(MODIFIER||||589|LOC_Os03g40550|protein_coding|CODING|LOC_Os03g40550.1|4|1) FN3571-S.SNP.3:22556433 chr03:022556433 0 W/22556433-22556433 FN3571-S SNP G -> A AC=1;AN=188;BQB=0.971567;DP=3975;DP4=1916,1968,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33517e-13;MQSB=0.995672;RPB=0.957245;SGB=43.8792;VDB=0.710835;EFF=INTRON(MODIFIER||||1172|LOC_Os03g40560|protein_coding|CODING|LOC_Os03g40560.1|2|1) FN710-S.SNP.3:22559076 chr03:022559076 0 W/22559076-22559076 FN710-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g40560 retrotransposon protein, putative, unclassified, expressed SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN3383-S.SNP.3:22559214 chr03:022559214 0 W/22559214-22559214 FN3383-S SNP G -> A AC=2;AN=184;BQB=0.980591;DP=3588;DP4=1817,1652,29,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.50746e-27;MQSB=0.813137;RPB=0.999393;SGB=225.092;VDB=0.550141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A987T|1172|LOC_Os03g40560|protein_coding|CODING|LOC_Os03g40560.1|5|1) FN723-S.SNP.3:22562328 chr03:022562328 0 W/22562328-22562328 FN723-S Single Base Substitution A-G INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2452.SNP.3:22563808 chr03:022563808 0 W/22563808-22563808 FN2452 SNP C -> A AC=1;AN=200;BQB=0.225223;DP=4241;DP4=2011,2014,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235793;MQB=5.42714e-11;MQSB=0.435688;RPB=0.895359;SGB=86.5007;VDB=0.205273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A274S|725|LOC_Os03g40580|protein_coding|CODING|LOC_Os03g40580.1|2|1) FN3482-S.SNP.3:22564839 chr03:022564839 0 W/22564839-22564839 FN3482-S SNP T -> C AC=1;AN=184;BQB=0.989306;DP=3919;DP4=1727,1993,17,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75074e-14;MQSB=0.993921;RPB=0.918182;SGB=56.0583;VDB=0.650762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1496-S.SNP.3:22566260 chr03:022566260 0 W/22566260-22566260 FN1496-S Single Base Substitution A-T INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN4082-S.SNP.3:22567943 chr03:022567943 0 W/22567943-22567943 FN4082-S SNP C -> A AC=1;AN=182;BQB=0.969642;DP=1794;DP4=658,1031,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.12224e-08;MQSB=0.420878;RPB=0.931271;SGB=39.1386;VDB=0.952373;EFF=UTR_3_PRIME(MODIFIER||161||193|LOC_Os03g40600|protein_coding|CODING|LOC_Os03g40600.1|1|1) FN2730-S.SNP.3:22568128 chr03:022568128 0 W/22568128-22568128 FN2730-S SNP C -> T AC=2;AN=200;BQB=0.0497735;DP=4064;DP4=2182,1651,10,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.19081e-08;MQSB=0.955603;RPB=0.908518;SGB=65.5058;VDB=0.834431;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A186|193|LOC_Os03g40600|protein_coding|CODING|LOC_Os03g40600.1|1|1) FN_812-4-1.SNP.3:22574266 chr03:022574266 0 W/22574266-22574266 FN_812-4-1 Single Base Substitution A-C HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1317-S.SNP.3:22574967 chr03:022574967 0 W/22574967-22574967 FN1317-S Single Base Substitution C-T INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN3759-S.SNP.3:22575500 chr03:022575500 0 W/22575500-22575500 FN3759-S SNP G -> A AC=1;AN=190;BQB=0.87306;DP=3215;DP4=1339,1778,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0037325;MQB=7.18306e-06;MQSB=5.24001e-13;RPB=0.653022;SGB=43.2083;VDB=0.38629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.3:22576033 chr03:022576033 0 W/22576033-22576033 FN2392 SNP C -> T AC=1;AN=200;BQB=0.492341;DP=4725;DP4=2259,2125,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31114e-06;MQSB=0.741951;RPB=0.6669;SGB=7.88476;VDB=0.382875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.3:22578774 chr03:022578774 0 W/22578774-22578774 FN3987-S SNP G -> T AC=1;AN=168;BQB=0.667734;DP=2748;DP4=1453,1131,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.10012e-09;MQSB=0.976978;RPB=0.932584;SGB=55.3328;VDB=0.440313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.3:22580168 chr03:022580168 0 W/22580168-22580168 FN3806-S SNP A -> G AC=1;AN=190;BQB=0.787432;DP=2699;DP4=1266,1301,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20181e-10;MQSB=0.834784;RPB=0.691984;SGB=46.7622;VDB=0.318781;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.3:22588701 chr03:022588701 0 W/22588701-22588701 FN1020-S Single Base Substitution C-T INTERGENIC HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2730-S.SNP.3:22590726 chr03:022590726 0 W/22590726-22590726 FN2730-S SNP C -> A AC=2;AN=200;BQB=0.905038;DP=4826;DP4=2426,2154,19,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.33515e-19;MQSB=0.971288;RPB=0.292539;SGB=112.373;VDB=0.790656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.3:22596568 chr03:022596568 0 W/22596568-22596568 FN3699-S SNP T -> A AC=1;AN=190;BQB=0.999998;DP=2885;DP4=1465,1330,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.2218e-12;MQSB=0.892216;RPB=0.777879;SGB=76.4186;VDB=0.6564;EFF=UTR_3_PRIME(MODIFIER||6054||401|LOC_Os03g40650|protein_coding|CODING|LOC_Os03g40650.1|2|1) FN3699-S.SNP.3:22596569 chr03:022596569 0 W/22596569-22596569 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.902426;DP=2885;DP4=1463,1324,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.06286e-11;MQSB=0.983377;RPB=0.750903;SGB=53.8699;VDB=0.5892;EFF=UTR_3_PRIME(MODIFIER||6053||401|LOC_Os03g40650|protein_coding|CODING|LOC_Os03g40650.1|2|1) FN3557-S.SNP.3:22598007 chr03:022598007 0 W/22598007-22598007 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.920803;DP=2588;DP4=1155,1354,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18287e-09;MQSB=0.97384;RPB=0.267659;SGB=76.2387;VDB=0.708022;EFF=INTRON(MODIFIER||||401|LOC_Os03g40650|protein_coding|CODING|LOC_Os03g40650.1|1|1) FN3500-S.SNP.3:22603797 chr03:022603797 0 W/22603797-22603797 FN3500-S SNP T -> A AC=1;AN=188;BQB=0.999977;DP=3710;DP4=1486,2002,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.46785e-12;MQSB=0.897373;RPB=0.233097;SGB=-11.1967;VDB=0.0684998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S11C|401|LOC_Os03g40650|protein_coding|CODING|LOC_Os03g40650.1|1|1) FN3095-S.SNP.3:22607747 chr03:022607747 0 W/22607747-22607747 FN3095-S SNP C -> T AC=2;AN=184;BQB=0.99607;DP=2794;DP4=1668,973,36,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.1305e-27;MQSB=0.697398;RPB=0.998096;SGB=156.081;VDB=0.698372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.3:22608522 chr03:022608522 0 W/22608522-22608522 FN3613-S SNP G -> T AC=1;AN=190;BQB=0.94359;DP=3068;DP4=1488,1474,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.45415e-12;MQSB=0.94603;RPB=0.900682;SGB=41.5369;VDB=0.118649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.3:22612598 chr03:022612598 0 W/22612598-22612598 FN2721-S SNP G -> T AC=1;AN=200;BQB=0.737391;DP=4500;DP4=2134,2116,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27864e-08;MQSB=0.965339;RPB=0.889118;SGB=3.06925;VDB=0.411966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.3:22619841 chr03:022619841 0 W/22619841-22619841 FN1761-S SNP T -> G AC=1;AN=188;BQB=0.716096;DP=3495;DP4=2059,1409,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00257511;MQB=2.373e-07;MQSB=0.260023;RPB=0.985734;SGB=48.979;VDB=0.369891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.3:22624082 chr03:022624082 0 W/22624082-22624082 FN2553-S SNP T -> A AC=1;AN=198;BQB=0.401409;DP=4089;DP4=1853,1879,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.1327e-07;MQSB=0.979909;RPB=0.372439;SGB=44.9538;VDB=0.125558;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.3:22627252 chr03:022627252 0 W/22627252-22627252 FN-181 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g40690 PPR repeat containing protein, expressed SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2320.SNP.3:22632800 chr03:022632800 0 W/22632800-22632800 FN2320 SNP C -> T AC=2;AN=192;BQB=0.579794;DP=4819;DP4=2332,2176,18,16;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00332019;MQB=7.47497e-08;MQSB=0.14758;RPB=0.0689972;SGB=149.626;VDB=0.174809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.3:22634801 chr03:022634801 0 W/22634801-22634801 FN2299 SNP A -> T AC=1;AN=192;BQB=0.408302;DP=4506;DP4=1605,2317,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.62575e-08;MQSB=0.978136;RPB=0.130673;SGB=-95.9313;VDB=0.339822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.3:22635477 chr03:022635477 0 W/22635477-22635477 FN3849-S SNP T -> C AC=1;AN=158;BQB=0.887281;DP=2781;DP4=1138,1511,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36068e-08;MQSB=0.9317;RPB=0.581958;SGB=51.4366;VDB=0.884621;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H112|432|LOC_Os03g40710|protein_coding|CODING|LOC_Os03g40710.1|1|1) FN-178.SNP.3:22641974 chr03:022641974 0 W/22641974-22641974 FN-178 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g40720 UDP-glucose 6-dehydrogenase, putative, expressed SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2404.SNP.3:22643333 chr03:022643333 0 W/22643333-22643333 FN2404 SNP G -> A AC=1;AN=200;BQB=0.533297;DP=3969;DP4=2001,1686,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.12379e-19;MQSB=0.99775;RPB=0.808758;SGB=71.1676;VDB=0.310429;EFF=INTRON(MODIFIER||||482|LOC_Os03g40720|protein_coding|CODING|LOC_Os03g40720.1|1|1) FN1411-S.SNP.3:22652878 chr03:022652878 0 W/22652878-22652878 FN1411-S Single Base Substitution G-A INTRON HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2774-S.SNP.3:22659617 chr03:022659617 0 W/22659617-22659617 FN2774-S SNP A -> T AC=1;AN=198;BQB=0.817763;DP=4346;DP4=1680,1945,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.81647e-07;MQSB=0.00955605;RPB=0.980312;SGB=4.56404;VDB=0.0534588;EFF=UTR_5_PRIME(MODIFIER||1776||206|LOC_Os03g40725|protein_coding|CODING|LOC_Os03g40725.1|1|1) FN1261-S.SNP.3:22661775 chr03:022661775 0 W/22661775-22661775 FN1261-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g40725 expressed protein SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN4221-S.SNP.3:22671098 chr03:022671098 0 W/22671098-22671098 FN4221-S SNP T -> G AC=1;AN=170;BQB=0.980658;DP=2503;DP4=1187,1232,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000399521;MQB=1.63848e-07;MQSB=0.482079;RPB=0.962818;SGB=56.7575;VDB=0.346151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K887Q|901|LOC_Os03g40780|protein_coding|CODING|LOC_Os03g40780.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K782Q|796|LOC_Os03g40780|protein_coding|CODING|LOC_Os03g40780.2|4|1) FN936-S.SNP.3:22680046 chr03:022680046 0 W/22680046-22680046 FN936-S Single Base Substitution T-C INTERGENIC HOMO SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3554-S.SNP.3:22683600 chr03:022683600 0 W/22683600-22683600 FN3554-S SNP C -> A AC=2;AN=188;BQB=0.792184;DP=2432;DP4=1029,1304,11,16;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=4.89123e-12;MQSB=0.0744935;RPB=0.241974;SGB=117.128;VDB=0.674613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.3:22692599 chr03:022692599 0 W/22692599-22692599 FN2457 SNP C -> T AC=1;AN=200;BQB=0.898156;DP=4229;DP4=2281,1770,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.64577e-14;MQSB=0.726511;RPB=0.828859;SGB=104.921;VDB=0.789092;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.3:22698006 chr03:022698006 0 W/22698006-22698006 FN1231-S Single Base Substitution T-C INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN3666-S.SNP.3:22698610 chr03:022698610 0 W/22698610-22698610 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.98596;DP=3007;DP4=1414,1499,4,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.56628e-11;MQSB=0.896536;RPB=0.017006;SGB=80.9724;VDB=0.0277234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.3:22713109 chr03:022713109 0 W/22713109-22713109 FN2378 SNP T -> G AC=1;AN=192;BQB=0.295225;DP=5064;DP4=2692,2090,14,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.3878e-17;MQSB=0.721877;RPB=0.702499;SGB=-86.0356;VDB=0.835843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M27L|274|LOC_Os03g40840|protein_coding|CODING|LOC_Os03g40840.1|1|1) FN2312.SNP.3:22714774 chr03:022714774 0 W/22714774-22714774 FN2312 SNP G -> A AC=2;AN=192;BQB=0.924579;DP=4352;DP4=2144,1650,19,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.29768e-20;MQSB=4.26238e-06;RPB=0.104415;SGB=38.6418;VDB=0.18098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.3:22719043 chr03:022719043 0 W/22719043-22719043 FN2735-S SNP C -> A AC=1;AN=200;BQB=0.973937;DP=4817;DP4=2296,2243,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14586e-12;MQSB=0.700686;RPB=0.988185;SGB=81.8956;VDB=0.266314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.3:22719044 chr03:022719044 0 W/22719044-22719044 FN2735-S SNP T -> A AC=1;AN=200;BQB=0.952916;DP=4825;DP4=2234,2321,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32863e-12;MQSB=0.60695;RPB=0.954678;SGB=58.2954;VDB=0.145471;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.3:22723606 chr03:022723606 0 W/22723606-22723606 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.938225;DP=3192;DP4=1390,1718,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37624e-06;MQSB=0.998621;RPB=0.821017;SGB=39.8925;VDB=0.0270688;EFF=INTRON(MODIFIER||||1389|LOC_Os03g40870|protein_coding|CODING|LOC_Os03g40870.1|1|1) FN2628-S.SNP.3:22723610 chr03:022723610 0 W/22723610-22723610 FN2628-S SNP A -> C AC=1;AN=200;BQB=0.875878;DP=5185;DP4=2600,2337,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24356e-16;MQSB=0.925513;RPB=0.506655;SGB=-4.03268;VDB=0.0554032;EFF=INTRON(MODIFIER||||1389|LOC_Os03g40870|protein_coding|CODING|LOC_Os03g40870.1|1|1) FN424-S.SNP.3:22734726 chr03:022734726 0 W/22734726-22734726 FN424-S Single Base Substitution C-G INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2263-S.SNP.3:22740387 chr03:022740387 0 W/22740387-22740387 FN2263-S SNP T -> A AC=1;AN=190;BQB=0.799162;DP=4849;DP4=2490,2049,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206228;MQB=1.98371e-14;MQSB=0.999313;RPB=0.85814;SGB=59.414;VDB=0.782067;EFF=INTRON(MODIFIER||||145|LOC_Os03g40920|protein_coding|CODING|LOC_Os03g40920.1|1|1) FN931-S.SNP.3:22749109 chr03:022749109 0 W/22749109-22749109 FN931-S Single Base Substitution T-C INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3528-S.SNP.3:22749347 chr03:022749347 0 W/22749347-22749347 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.983236;DP=3038;DP4=1751,1205,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000658328;MQB=5.78522e-13;MQSB=0.0669186;RPB=0.999143;SGB=108.042;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.3:22751756 chr03:022751756 0 W/22751756-22751756 FN2366 SNP T -> G AC=1;AN=192;BQB=0.903331;DP=5209;DP4=2207,2669,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000191975;MQB=4.49541e-13;MQSB=0.854254;RPB=0.746985;SGB=49.4287;VDB=0.293078;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.3:22751975 chr03:022751975 0 W/22751975-22751975 FN-293 Single Base Substitution T-G INTERGENIC HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1652-S.SNP.3:22753326 chr03:022753326 0 W/22753326-22753326 FN1652-S Single Base Substitution C-T INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN3439-S.SNP.3:22766710 chr03:022766710 0 W/22766710-22766710 FN3439-S SNP C -> G AC=1;AN=184;BQB=0.994406;DP=3494;DP4=2031,1366,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00057241;MQB=7.42585e-06;MQSB=0.951407;RPB=0.880448;SGB=32.2261;VDB=0.675843;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.3:22766773 chr03:022766773 0 W/22766773-22766773 FN911-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN1492-S.SNP.3:22767835 chr03:022767835 0 W/22767835-22767835 FN1492-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2268-S.SNP.3:22769266 chr03:022769266 0 W/22769266-22769266 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.989819;DP=4188;DP4=2091,1746,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00286533;MQB=0.00439329;MQSB=0.0257639;RPB=0.658221;SGB=35.4339;VDB=0.0408554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1477I|1735|LOC_Os03g40970|protein_coding|CODING|LOC_Os03g40970.1|7|1) FN2469.SNP.3:22775644 chr03:022775644 0 W/22775644-22775644 FN2469 SNP C -> T AC=1;AN=200;BQB=0.209152;DP=2151;DP4=1580,358,10,0;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00173477;MQSB=1.05973e-11;RPB=0.946294;SGB=40.4492;VDB=0.920203;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.3:22778211 chr03:022778211 0 W/22778211-22778211 FN462-S Single Base Substitution C-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1047-S.SNP.3:22779235 chr03:022779235 0 W/22779235-22779235 FN1047-S Single Base Substitution A-C INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3657-S.SNP.3:22796652 chr03:022796652 0 W/22796652-22796652 FN3657-S SNP A -> G AC=1;AN=190;BQB=0.732976;DP=2335;DP4=1108,1087,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000428266;MQB=2.83369e-07;MQSB=0.995564;RPB=0.794082;SGB=28.9929;VDB=0.831731;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.3:22801073 chr03:022801073 0 W/22801073-22801073 FN864-S Single Base Substitution C-T INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN-374.SNP.3:22802728 chr03:022802728 0 W/22802728-22802728 FN-374 Single Base Substitution T-C INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3563-S.SNP.3:22803447 chr03:022803447 0 W/22803447-22803447 FN3563-S SNP G -> T AC=1;AN=188;BQB=0.397754;DP=3579;DP4=2010,1429,22,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.37479e-17;MQSB=0.992295;RPB=0.998836;SGB=162.561;VDB=0.791329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.3:22804904 chr03:022804904 0 W/22804904-22804904 FN2791-S SNP A -> C AC=1;AN=198;BQB=0.516053;DP=4364;DP4=2123,1914,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.57045e-14;MQSB=0.92523;RPB=0.651628;SGB=52.7004;VDB=0.438789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.3:22806477 chr03:022806477 0 W/22806477-22806477 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2750-S.SNP.3:22809680 chr03:022809680 0 W/22809680-22809680 FN2750-S SNP C -> T AC=2;AN=200;BQB=0.542987;DP=5243;DP4=2478,2442,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.24039e-22;MQSB=0.986257;RPB=0.856466;SGB=130.399;VDB=0.664805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.3:22809765 chr03:022809765 0 W/22809765-22809765 FN2320 SNP G -> A AC=2;AN=192;BQB=0.0883949;DP=5048;DP4=2358,2422,21,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.46294e-27;MQSB=0.841787;RPB=0.471694;SGB=150.275;VDB=0.136483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.3:22811533 chr03:022811533 0 W/22811533-22811533 FN1031-S Single Base Substitution C-T INTERGENIC HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4140-S.SNP.3:22817260 chr03:022817260 0 W/22817260-22817260 FN4140-S SNP T -> A AC=1;AN=170;BQB=0.857142;DP=2532;DP4=1349,1060,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.27215e-11;MQSB=0.988895;RPB=0.451777;SGB=48.6486;VDB=0.0306797;EFF=UTR_3_PRIME(MODIFIER||35||94|LOC_Os03g41060|protein_coding|CODING|LOC_Os03g41060.1|2|1) FN4140-S.SNP.3:22817261 chr03:022817261 0 W/22817261-22817261 FN4140-S SNP G -> T AC=1;AN=170;BQB=0.984609;DP=2526;DP4=1364,1091,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.98331e-10;MQSB=0.997049;RPB=0.391443;SGB=61.2001;VDB=0.111138;EFF=UTR_3_PRIME(MODIFIER||34||94|LOC_Os03g41060|protein_coding|CODING|LOC_Os03g41060.1|2|1) FN4140-S.SNP.3:22817262 chr03:022817262 0 W/22817262-22817262 FN4140-S SNP G -> T AC=1;AN=170;BQB=0.567;DP=2525;DP4=1370,1088,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.15872e-10;MQSB=0.999703;RPB=0.318344;SGB=61.2001;VDB=0.0248053;EFF=UTR_3_PRIME(MODIFIER||33||94|LOC_Os03g41060|protein_coding|CODING|LOC_Os03g41060.1|2|1) FN971-S.SNP.3:22817387 chr03:022817387 0 W/22817387-22817387 FN971-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g41060 GASR2 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative, expressed SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3771-S.SNP.3:22817672 chr03:022817672 0 W/22817672-22817672 FN3771-S SNP C -> T AC=1;AN=190;BQB=0.821155;DP=2920;DP4=1378,1400,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.25849e-07;MQSB=0.999904;RPB=0.99296;SGB=15.9981;VDB=0.131993;EFF=START_GAINED(LOW||||94|LOC_Os03g41060|protein_coding|CODING|LOC_Os03g41060.1|1|1),UTR_5_PRIME(MODIFIER||23||94|LOC_Os03g41060|protein_coding|CODING|LOC_Os03g41060.1|1|1) FN1754-S.SNP.3:22820923 chr03:022820923 0 W/22820923-22820923 FN1754-S SNP C -> T AC=1;AN=188;BQB=0.997474;DP=3444;DP4=1340,2071,4,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.59467e-09;MQSB=0.999931;RPB=0.230083;SGB=28.6195;VDB=0.540352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.3:22821134 chr03:022821134 0 W/22821134-22821134 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.999979;DP=5356;DP4=2842,2206,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.81046e-09;MQSB=0.98743;RPB=0.991491;SGB=24.2746;VDB=0.61371;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.3:22821146 chr03:022821146 0 W/22821146-22821146 FN-173 Single Base Substitution C-A INTERGENIC HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN3462-S.SNP.3:22825013 chr03:022825013 0 W/22825013-22825013 FN3462-S SNP C -> T AC=2;AN=184;BQB=0.441724;DP=2626;DP4=1284,1222,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.22179e-08;MQSB=0.985561;RPB=0.912233;SGB=60.4004;VDB=0.518611;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.3:22827488 chr03:022827488 0 W/22827488-22827488 FN1623-S Single Base Substitution C-T UTR_5_PRIME Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3792-S.SNP.3:22829807 chr03:022829807 0 W/22829807-22829807 FN3792-S SNP G -> T AC=1;AN=190;BQB=0.639819;DP=2344;DP4=1091,1154,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000504831;MQSB=0.991394;RPB=0.161092;SGB=21.8853;VDB=0.397592;EFF=INTRON(MODIFIER||||405|LOC_Os03g41080|protein_coding|CODING|LOC_Os03g41080.1|2|1) FN-285.SNP.3:22835565 chr03:022835565 0 W/22835565-22835565 FN-285 Single Base Substitution C-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2752-S.SNP.3:22836943 chr03:022836943 0 W/22836943-22836943 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.674065;DP=5082;DP4=2213,2649,7,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00255805;MQB=0.0772795;MQSB=0.025273;RPB=0.289333;SGB=58.8698;VDB=0.925155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.3:22842273 chr03:022842273 0 W/22842273-22842273 FN2355 SNP G -> T AC=2;AN=192;BQB=0.969499;DP=4218;DP4=1969,2071,14,23;HOB=0.0206163;ICB=0.494846;MQ=34;MQ0F=0.0595069;MQB=0.748982;MQSB=0;RPB=0.308582;SGB=38.6418;VDB=0.295953;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.3:22842297 chr03:022842297 0 W/22842297-22842297 FN1431-S Single Base Substitution G-A INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-26.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN-26 Single Base Substitution C-A INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN1315-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN1315-S Single Base Substitution C-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1430-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN1430-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1529-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN1529-S Single Base Substitution C-A INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2121-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN2121-S SNP C -> A AC=1;AN=168;BQB=0.365887;DP=2569;DP4=1356,1173,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0163488;MQB=0.287103;MQSB=5.68639e-05;RPB=0.998703;SGB=-0.101747;VDB=0.838639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN2194-S SNP C -> A AC=2;AN=190;BQB=0.580486;DP=4339;DP4=2253,1772,29,29;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00806637;MQB=4.24553e-07;MQSB=0.388907;RPB=0.711295;SGB=258.574;VDB=0.0832204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN2286 SNP C -> A AC=2;AN=192;BQB=0.974166;DP=4668;DP4=2310,2068,26,22;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.00599829;MQB=0.000151415;MQSB=0.998385;RPB=0.11295;SGB=55.8496;VDB=0.692126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN2445 SNP C -> A AC=1;AN=200;BQB=0.944252;DP=4102;DP4=2094,1771,13,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00609459;MQB=0.00119085;MQSB=0.104094;RPB=0.749242;SGB=72.7161;VDB=0.788782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN3359-S SNP C -> A AC=1;AN=184;BQB=0.996791;DP=3312;DP4=1630,1569,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00422705;MQB=0.0663522;MQSB=0.0966468;RPB=0.519879;SGB=32.2261;VDB=0.127721;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN4049-S SNP C -> A AC=2;AN=168;BQB=0.995002;DP=2447;DP4=1235,1101,10,6;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00490396;MQB=0.0781904;MQSB=0.0886908;RPB=0.64483;SGB=45.0404;VDB=0.388543;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN550-S Single Base Substitution C-A INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN912-S.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN912-S Single Base Substitution C-A INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_789-3-1.SNP.3:22843833 chr03:022843833 0 W/22843833-22843833 FN_789-3-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN3505-S.SNP.3:22846569 chr03:022846569 0 W/22846569-22846569 FN3505-S SNP G -> A AC=1;AN=188;BQB=0.939749;DP=3165;DP4=1354,1736,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.05704e-06;MQSB=0.960607;RPB=0.991094;SGB=-2.17824;VDB=0.069922;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T241|373|LOC_Os03g41100|protein_coding|CODING|LOC_Os03g41100.1|4|1) FN-52.SNP.3:22847910 chr03:022847910 0 W/22847910-22847910 FN-52 Single Base Substitution G-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2422.SNP.3:22853005 chr03:022853005 0 W/22853005-22853005 FN2422 SNP A -> G AC=2;AN=200;BQB=0.910326;DP=4577;DP4=2397,1920,28,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.05603e-25;MQSB=0.958535;RPB=0.172085;SGB=210.84;VDB=0.389706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1722-S.SNP.3:22858297 chr03:022858297 0 W/22858297-22858297 FN1722-S SNP T -> A AC=1;AN=188;BQB=0.0251195;DP=4072;DP4=1948,2078,14,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.14362e-10;MQSB=0.91003;RPB=0.808702;SGB=-80.8397;VDB=0.737619;EFF=INTRON(MODIFIER||||111|LOC_Os03g41120|protein_coding|CODING|LOC_Os03g41120.1|1|1) FN3948-S.SNP.3:22876696 chr03:022876696 0 W/22876696-22876696 FN3948-S SNP G -> A AC=1;AN=168;BQB=0.918604;DP=2656;DP4=1416,1108,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.57732e-07;MQSB=0.992871;RPB=0.77367;SGB=22.1847;VDB=0.563569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.3:22877158 chr03:022877158 0 W/22877158-22877158 FN2771-S SNP G -> A AC=2;AN=198;BQB=0.948587;DP=4124;DP4=2007,1853,20,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.98169e-22;MQSB=0.798953;RPB=0.997754;SGB=126.432;VDB=0.894792;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.3:22882489 chr03:022882489 0 W/22882489-22882489 FN3785-S SNP G -> T AC=2;AN=190;BQB=0.682039;DP=2695;DP4=1411,1150,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.56407e-12;MQSB=0.964879;RPB=0.916791;SGB=117.403;VDB=0.480004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L47I|66|LOC_Os03g41154|protein_coding|CODING|LOC_Os03g41154.1|1|1) FN1633-S.SNP.3:22884860 chr03:022884860 0 W/22884860-22884860 FN1633-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g41160 RNA-directed DNA polymerase, putative SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN528-S.SNP.3:22886853 chr03:022886853 0 W/22886853-22886853 FN528-S Single Base Substitution C-A INTERGENIC HET SNo: 526, Mutant_ID: FN528-S, Generation: M2, Mutations: 6, Genes: 0, Seed availability: No. FN2206-S.SNP.3:22886929 chr03:022886929 0 W/22886929-22886929 FN2206-S SNP C -> G AC=2;AN=190;BQB=0.589837;DP=4951;DP4=1962,2646,16,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.9985e-23;MQSB=0.91607;RPB=0.868978;SGB=176.604;VDB=0.00849537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.3:22891069 chr03:022891069 0 W/22891069-22891069 FN1170-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2790-S.SNP.3:22907941 chr03:022907941 0 W/22907941-22907941 FN2790-S SNP A -> T AC=1;AN=198;BQB=0.304932;DP=4554;DP4=2506,1744,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.017567;MQB=0.0394075;MQSB=5.13881e-29;RPB=0.16674;SGB=26.8957;VDB=0.59108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.3:22908693 chr03:022908693 0 W/22908693-22908693 FN3445-S SNP T -> C AC=1;AN=184;BQB=0.615179;DP=3379;DP4=1429,1753,5,74;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00503107;MQB=0;MQSB=0.12559;RPB=0.259036;SGB=-1613.16;VDB=1;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.3:22911816 chr03:022911816 0 W/22911816-22911816 FN1520-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g41200 retrotransposon protein, putative, unclassified, expressed SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1532-S.SNP.3:22922136 chr03:022922136 0 W/22922136-22922136 FN1532-S Single Base Substitution A-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1202-S.SNP.3:22926593 chr03:022926593 0 W/22926593-22926593 FN1202-S Single Base Substitution T-A INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN448-S.SNP.3:22934264 chr03:022934264 0 W/22934264-22934264 FN448-S Single Base Substitution G-A INTRON HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2353.SNP.3:22937259 chr03:022937259 0 W/22937259-22937259 FN2353 SNP T -> A AC=1;AN=192;BQB=0.965938;DP=4761;DP4=2238,2138,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.14982e-12;MQSB=0.961786;RPB=0.995294;SGB=94.8539;VDB=0.995312;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.3:22937377 chr03:022937377 0 W/22937377-22937377 FN959-S Single Base Substitution T-C INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN576-S.SNP.3:22939602 chr03:022939602 0 W/22939602-22939602 FN576-S Single Base Substitution C-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN4073-S.SNP.3:22946143 chr03:022946143 0 W/22946143-22946143 FN4073-S SNP G -> A AC=2;AN=182;BQB=0.750653;DP=2807;DP4=1324,1394,12,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.05149e-12;MQSB=0.935355;RPB=0.666426;SGB=98.2417;VDB=0.761487;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.3:22947104 chr03:022947104 0 W/22947104-22947104 FN4089-S SNP C -> T AC=1;AN=182;BQB=0.663288;DP=2920;DP4=1406,1416,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.00233e-10;MQSB=0.9264;RPB=0.672068;SGB=60.2037;VDB=0.16779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.3:22952441 chr03:022952441 0 W/22952441-22952441 FN3991-S SNP T -> A AC=1;AN=168;BQB=0.953948;DP=2694;DP4=1412,1184,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.04975e-05;MQSB=0.979845;RPB=0.999994;SGB=17.5943;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.3:22955767 chr03:022955767 0 W/22955767-22955767 FN_543-2-6 Single Base Substitution A-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN_543-2-6.SNP.3:22955770 chr03:022955770 0 W/22955770-22955770 FN_543-2-6 Single Base Substitution C-A HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN990-S.SNP.3:22963301 chr03:022963301 0 W/22963301-22963301 FN990-S Single Base Substitution A-C INTRON HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-187.SNP.3:22970757 chr03:022970757 0 W/22970757-22970757 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-187.SNP.3:22970761 chr03:022970761 0 W/22970761-22970761 FN-187 Single Base Substitution T-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3807-S.SNP.3:22974961 chr03:022974961 0 W/22974961-22974961 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.969608;DP=1764;DP4=885,825,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.55975e-05;MQSB=0.0004341;RPB=0.891306;SGB=35.4339;VDB=0.858815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.3:22975092 chr03:022975092 0 W/22975092-22975092 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2719-S.SNP.3:22981035 chr03:022981035 0 W/22981035-22981035 FN2719-S SNP G -> T AC=1;AN=200;BQB=0.947761;DP=2169;DP4=382,1629,1,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.104e-05;MQSB=0.120511;RPB=0.750709;SGB=40.4492;VDB=0.414348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.3:22986157 chr03:022986157 0 W/22986157-22986157 FN3930-S SNP G -> A AC=1;AN=158;BQB=0.901718;DP=1955;DP4=676,1163,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.07634e-09;MQSB=0.919804;RPB=0.683186;SGB=26.1881;VDB=0.0605845;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.3:22989017 chr03:022989017 0 W/22989017-22989017 FN1568-S Single Base Substitution A-G INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN3385-S.SNP.3:22998863 chr03:022998863 0 W/22998863-22998863 FN3385-S SNP C -> A AC=2;AN=184;BQB=0.704148;DP=2832;DP4=1170,1514,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.11765e-13;MQSB=0.931897;RPB=0.97337;SGB=17.4548;VDB=0.70312;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.3:23004701 chr03:023004701 0 W/23004701-23004701 FN-402 Single Base Substitution G-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3542-S.SNP.3:23006070 chr03:023006070 0 W/23006070-23006070 FN3542-S SNP T -> C AC=1;AN=188;BQB=0.697734;DP=3344;DP4=1560,1635,16,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.39367e-08;MQSB=0.158415;RPB=0.522056;SGB=7.0815;VDB=0.135564;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.3:23006070 chr03:023006070 0 W/23006070-23006070 W423-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN3765-S.SNP.3:23009553 chr03:023009553 0 W/23009553-23009553 FN3765-S SNP C -> T AC=1;AN=190;BQB=0.954945;DP=2163;DP4=1037,1040,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000307065;MQSB=8.615e-05;RPB=0.828506;SGB=35.4339;VDB=0.375148;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.3:23014406 chr03:023014406 0 W/23014406-23014406 FN820-S Single Base Substitution T-G INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN2713-S.SNP.3:23015481 chr03:023015481 0 W/23015481-23015481 FN2713-S SNP T -> G AC=1;AN=200;BQB=0.830326;DP=4538;DP4=2263,2096,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66835e-15;MQSB=0.998895;RPB=0.174398;SGB=47.7211;VDB=0.741414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1084-S.SNP.3:23022367 chr03:023022367 0 W/23022367-23022367 FN1084-S Single Base Substitution C-T INTRON HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3594-S.SNP.3:23024106 chr03:023024106 0 W/23024106-23024106 FN3594-S SNP G -> A AC=1;AN=188;BQB=0.943557;DP=2911;DP4=1495,1323,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02295e-09;MQSB=0.989122;RPB=0.878406;SGB=57.244;VDB=0.95438;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.3:23027324 chr03:023027324 0 W/23027324-23027324 FN4235-S SNP C -> T AC=2;AN=170;BQB=0.782123;DP=2308;DP4=1157,1022,15,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.82059e-13;MQSB=0.96329;RPB=0.862473;SGB=69.3045;VDB=0.866539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.3:23030206 chr03:023030206 0 W/23030206-23030206 FN1024-S Single Base Substitution T-A INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2554-S.SNP.3:23033524 chr03:023033524 0 W/23033524-23033524 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.966613;DP=3694;DP4=1675,1747,15,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000270709;MQB=5.49651e-12;MQSB=0.0100426;RPB=0.486648;SGB=65.3149;VDB=0.633922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.3:23033821 chr03:023033821 0 W/23033821-23033821 FN2477 SNP C -> T AC=2;AN=200;BQB=0.516376;DP=3105;DP4=993,1835,7,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.62378e-13;MQSB=0.991763;RPB=0.998121;SGB=79.9264;VDB=0.866912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.3:23042012 chr03:023042012 0 W/23042012-23042012 FN3569-S SNP G -> A AC=1;AN=188;BQB=0.484618;DP=2528;DP4=1197,1280,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.32597e-08;MQSB=0.945583;RPB=0.466059;SGB=53.7007;VDB=0.118776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.3:23045251 chr03:023045251 0 W/23045251-23045251 FN3491-S SNP G -> A AC=1;AN=188;BQB=0.845415;DP=3876;DP4=1881,1881,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10252e-10;MQSB=0.19184;RPB=0.975288;SGB=67.8739;VDB=0.962492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.3:23048515 chr03:023048515 0 W/23048515-23048515 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.691305;DP=4633;DP4=1925,2343,14,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.95842e-16;MQSB=0.939631;RPB=0.661644;SGB=79.9264;VDB=0.838181;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R98|719|LOC_Os03g41419|protein_coding|CODING|LOC_Os03g41419.1|1|1) FN-353.SNP.3:23052260 chr03:023052260 0 W/23052260-23052260 FN-353 Single Base Substitution T-G INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2630-S.SNP.3:23057588 chr03:023057588 0 W/23057588-23057588 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.999661;DP=4336;DP4=2272,1753,17,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51139e-13;MQSB=0.392621;RPB=0.665156;SGB=72.7161;VDB=0.941593;EFF=INTRON(MODIFIER||||405|LOC_Os03g41438|protein_coding|CODING|LOC_Os03g41438.1|1|1) FN-365.SNP.3:23057885 chr03:023057885 0 W/23057885-23057885 FN-365 Single Base Substitution C-G INTRON HOMO SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN768-S.SNP.3:23058287 chr03:023058287 0 W/23058287-23058287 FN768-S Single Base Substitution G-A INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN3723-S.SNP.3:23059462 chr03:023059462 0 W/23059462-23059462 FN3723-S SNP G -> T AC=1;AN=190;BQB=0.683146;DP=2511;DP4=1212,1191,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000553249;MQSB=0.889492;RPB=0.281058;SGB=21.8853;VDB=0.466689;EFF=INTRON(MODIFIER||||405|LOC_Os03g41438|protein_coding|CODING|LOC_Os03g41438.1|1|1) FN367-S.SNP.3:23060728 chr03:023060728 0 W/23060728-23060728 FN367-S Single Base Substitution T-G INTRON HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN889-S.SNP.3:23061079 chr03:023061079 0 W/23061079-23061079 FN889-S Single Base Substitution A-T INTRON HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2619-S.SNP.3:23063484 chr03:023063484 0 W/23063484-23063484 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.495813;DP=4456;DP4=1921,2140,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.28328e-17;MQSB=3.0098e-07;RPB=0.575255;SGB=30.086;VDB=0.452093;EFF=INTRON(MODIFIER||||405|LOC_Os03g41438|protein_coding|CODING|LOC_Os03g41438.1|1|1) FN3674-S.SNP.3:23065654 chr03:023065654 0 W/23065654-23065654 FN3674-S SNP A -> C AC=1;AN=190;BQB=0.989171;DP=3286;DP4=1486,1655,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61761e-07;MQSB=0.895798;RPB=0.241554;SGB=53.6492;VDB=0.896445;EFF=INTRON(MODIFIER||||405|LOC_Os03g41438|protein_coding|CODING|LOC_Os03g41438.1|1|1) FN1338-S.SNP.3:23072232 chr03:023072232 0 W/23072232-23072232 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3768-S.SNP.3:23074109 chr03:023074109 0 W/23074109-23074109 FN3768-S SNP G -> T AC=1;AN=190;BQB=0.973734;DP=2727;DP4=1409,1216,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.93702e-10;MQSB=0.465034;RPB=0.564907;SGB=80.9724;VDB=0.0504294;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A210|291|LOC_Os03g41470|protein_coding|CODING|LOC_Os03g41470.1|3|1) FN3342-S.SNP.3:23080706 chr03:023080706 0 W/23080706-23080706 FN3342-S SNP G -> A AC=1;AN=184;BQB=0.927485;DP=3157;DP4=1496,1556,15,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0250238;MQB=3.14751e-05;MQSB=0.480496;RPB=0.0723592;SGB=56.8786;VDB=0.413856;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.3:23080921 chr03:023080921 0 W/23080921-23080921 FN774-S Single Base Substitution G-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN990-S.SNP.3:23097853 chr03:023097853 0 W/23097853-23097853 FN990-S Single Base Substitution C-T INTERGENIC HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. W472-5-1.SNP.3:23100797 chr03:023100797 0 W/23100797-23100797 W472-5-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g41540 hypothetical protein SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2657-S.SNP.3:23107164 chr03:023107164 0 W/23107164-23107164 FN2657-S SNP A -> T AC=1;AN=200;BQB=0.590009;DP=5309;DP4=3051,2052,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000188359;MQB=1.03649e-14;MQSB=0.924511;RPB=0.199746;SGB=104.921;VDB=0.156987;EFF=INTERGENIC(MODIFIER||||||||||1) FN585-S.SNP.3:23110605 chr03:023110605 0 W/23110605-23110605 FN585-S Single Base Substitution C-T INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1726-S.SNP.3:23112967 chr03:023112967 0 W/23112967-23112967 FN1726-S SNP C -> T AC=2;AN=188;BQB=0.890715;DP=2020;DP4=1605,370,29,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.34512e-18;MQSB=0.950025;RPB=0.342277;SGB=79.9272;VDB=0.544172;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.3:23116168 chr03:023116168 0 W/23116168-23116168 FN536-S Single Base Substitution T-C INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN-170.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN-170 Single Base Substitution G-A INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-63.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN-63 Single Base Substitution G-A INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1128-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN1128-S Single Base Substitution G-A INTERGENIC HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1334-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN1334-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1368-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN1368-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1577-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN1577-S Single Base Substitution G-A INTERGENIC Homo SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1748-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN1748-S SNP G -> A AC=2;AN=188;BQB=0.901146;DP=1549;DP4=766,732,6,5;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0729503;MQB=0.903984;MQSB=0;RPB=0.899858;SGB=44.4357;VDB=0.39833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN2230-S SNP G -> A AC=2;AN=190;BQB=0.0627093;DP=3693;DP4=1720,1639,13,18;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0422421;MQB=0.111276;MQSB=0;RPB=0.446503;SGB=64.5217;VDB=0.350402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN2318 SNP G -> A AC=2;AN=192;BQB=0.0173594;DP=4848;DP4=2395,2099,22,17;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0.0402228;MQB=0.00687936;MQSB=0;RPB=0.810345;SGB=172.448;VDB=0.662565;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN2752-S SNP G -> A AC=2;AN=200;BQB=0.346619;DP=4669;DP4=2286,2116,20,9;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0340544;MQB=0.015014;MQSB=0;RPB=0.952031;SGB=94.3471;VDB=0.469551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3331-S SNP G -> A AC=2;AN=184;BQB=0.376195;DP=3062;DP4=1567,1377,23,10;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0.0372306;MQB=0.241572;MQSB=0;RPB=0.994071;SGB=143.7;VDB=0.422554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3421-S SNP G -> A AC=2;AN=184;BQB=0.938834;DP=2860;DP4=1470,1284,18,10;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0.0276224;MQB=0.0621801;MQSB=0;RPB=0.671162;SGB=88.5747;VDB=0.0289897;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3501-S SNP G -> A AC=2;AN=188;BQB=0.984063;DP=2896;DP4=1487,1327,13,11;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0303867;MQB=0.16701;MQSB=0;RPB=0.888085;SGB=103.498;VDB=0.61523;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN354-S Single Base Substitution G-A INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3669-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3669-S SNP G -> A AC=2;AN=190;BQB=0.736116;DP=2395;DP4=1162,1141,6,9;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0367432;MQB=0.311359;MQSB=0;RPB=0.86065;SGB=43.2083;VDB=0.687803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3762-S SNP G -> A AC=2;AN=190;BQB=0.954889;DP=2873;DP4=1419,1349,12,9;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0299339;MQB=0.285354;MQSB=0;RPB=0.589169;SGB=90.0802;VDB=0.335112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN3915-S SNP G -> A AC=2;AN=158;BQB=0.92779;DP=2525;DP4=1232,1186,15,10;HOB=0.024996;ICB=0.493752;MQ=36;MQ0F=0.0392079;MQB=0.0902593;MQSB=0;RPB=0.354394;SGB=74.5068;VDB=0.269991;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN4031-S SNP G -> A AC=2;AN=168;BQB=0.971852;DP=2354;DP4=1188,1055,23,13;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0348343;MQB=0.23808;MQSB=0;RPB=0.707863;SGB=154.082;VDB=0.290092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN4129-S SNP G -> A AC=2;AN=182;BQB=0.719352;DP=2945;DP4=1484,1353,16,19;HOB=0.0217365;ICB=0.494567;MQ=37;MQ0F=0.0383701;MQB=0.0823298;MQSB=0;RPB=0.79203;SGB=152.372;VDB=0.211636;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN4143-S SNP G -> A AC=2;AN=170;BQB=0.692368;DP=2525;DP4=1213,1220,16,7;HOB=0.0232526;ICB=0.494188;MQ=37;MQ0F=0.029703;MQB=0.771855;MQSB=0;RPB=0.354779;SGB=96.7413;VDB=0.801892;EFF=INTERGENIC(MODIFIER||||||||||1) FN707-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN707-S Single Base Substitution G-A INTERGENIC HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN785-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN785-S Single Base Substitution G-A INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN925-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN925-S Single Base Substitution G-A INTERGENIC HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN969-S.SNP.3:23123639 chr03:023123639 0 W/23123639-23123639 FN969-S Single Base Substitution G-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN427-S.SNP.3:23132909 chr03:023132909 0 W/23132909-23132909 FN427-S Single Base Substitution T-G INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2354.SNP.3:23134058 chr03:023134058 0 W/23134058-23134058 FN2354 SNP A -> G AC=1;AN=192;BQB=0.36479;DP=4750;DP4=2113,2330,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28134e-10;MQSB=0.967711;RPB=0.0393327;SGB=34.0426;VDB=0.0410456;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.3:23142619 chr03:023142619 0 W/23142619-23142619 FN621-S Single Base Substitution C-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN-163.SNP.3:23144673 chr03:023144673 0 W/23144673-23144673 FN-163 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g41624 retrotransposon, putative, centromere-specific, expressed SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2742-S.SNP.3:23162199 chr03:023162199 0 W/23162199-23162199 FN2742-S SNP C -> T AC=2;AN=200;BQB=0.999169;DP=4781;DP4=2375,2147,24,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.11341e-30;MQSB=0.456907;RPB=0.713334;SGB=67.2761;VDB=0.0280963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.3:23164727 chr03:023164727 0 W/23164727-23164727 FN3713-S SNP G -> T AC=1;AN=190;BQB=0.468508;DP=3263;DP4=1359,1782,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0389212;MQB=0.624687;MQSB=2.88788e-22;RPB=0.868731;SGB=53.8699;VDB=0.529957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.3:23168744 chr03:023168744 0 W/23168744-23168744 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.343972;DP=2792;DP4=1169,1456,8,107;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00752149;MQB=0;MQSB=7.84663e-08;RPB=0.000560227;SGB=-1120.26;VDB=4.12525e-26;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D248|702|LOC_Os03g41700|protein_coding|CODING|LOC_Os03g41700.1|3|1) FN934-S.SNP.3:23173314 chr03:023173314 0 W/23173314-23173314 FN934-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN680-S.SNP.3:23177706 chr03:023177706 0 W/23177706-23177706 FN680-S Single Base Substitution C-T INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2596-S.SNP.3:23179854 chr03:023179854 0 W/23179854-23179854 FN2596-S SNP A -> G AC=1;AN=198;BQB=0.522739;DP=4275;DP4=2151,1928,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0479532;MQB=0.822193;MQSB=0.0047952;RPB=0.958477;SGB=-15.6211;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.3:23181667 chr03:023181667 0 W/23181667-23181667 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.868632;DP=3815;DP4=2062,1505,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.4739e-11;MQSB=0.94795;RPB=0.929366;SGB=90.4807;VDB=0.937562;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.3:23197299 chr03:023197299 0 W/23197299-23197299 FN-238 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2102-S.SNP.3:23197331 chr03:023197331 0 W/23197331-23197331 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.242036;DP=2274;DP4=1408,802,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00131926;MQB=6.15467e-05;MQSB=0.00689782;RPB=0.451827;SGB=-64.9298;VDB=0.754462;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q57*|1343|LOC_Os03g41770|protein_coding|CODING|LOC_Os03g41770.1|2|1);LOF=(LOC_Os03g41770|LOC_Os03g41770|1|1.00);NMD=(LOC_Os03g41770|LOC_Os03g41770|1|1.00) FN848-S.SNP.3:23198092 chr03:023198092 0 W/23198092-23198092 FN848-S Single Base Substitution T-G INTRON HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2195-S.SNP.3:23198284 chr03:023198284 0 W/23198284-23198284 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.957935;DP=4595;DP4=2146,2129,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00195865;MQB=0.000403134;MQSB=2.51676e-09;RPB=0.554999;SGB=44.0907;VDB=0.602338;EFF=INTRON(MODIFIER||||1343|LOC_Os03g41770|protein_coding|CODING|LOC_Os03g41770.1|1|1) FN_552-1-1.SNP.3:23198284 chr03:023198284 0 W/23198284-23198284 FN_552-1-1 Single Base Substitution C-T Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN2426.SNP.3:23199603 chr03:023199603 0 W/23199603-23199603 FN2426 SNP G -> A AC=2;AN=200;BQB=0.638471;DP=1975;DP4=1109,719,9,27;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=8.62481e-07;MQSB=2.62771e-14;RPB=0.348899;SGB=154.759;VDB=0.935728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.3:23203584 chr03:023203584 0 W/23203584-23203584 FN2088-S SNP C -> T AC=1;AN=168;BQB=0.307127;DP=3514;DP4=1955,1504,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00398406;MQB=0.00427213;MQSB=2.00823e-14;RPB=0.683585;SGB=-36.0898;VDB=0.481902;EFF=INTRON(MODIFIER||||1017|LOC_Os03g41780|protein_coding|CODING|LOC_Os03g41780.1|4|1) FN2106-S.SNP.3:23205572 chr03:023205572 0 W/23205572-23205572 FN2106-S SNP A -> T AC=2;AN=168;BQB=0.258873;DP=2983;DP4=1425,1493,23,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.75067e-16;MQSB=0.91432;RPB=0.205053;SGB=-49.7502;VDB=0.362919;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E446V|1017|LOC_Os03g41780|protein_coding|CODING|LOC_Os03g41780.1|6|1) FN2276-S.SNP.3:23206016 chr03:023206016 0 W/23206016-23206016 FN2276-S SNP C -> T AC=2;AN=190;BQB=0.376339;DP=4324;DP4=2053,1920,17,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.46863e-20;MQSB=0.604842;RPB=0.999981;SGB=97.7221;VDB=0.243968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S594L|1017|LOC_Os03g41780|protein_coding|CODING|LOC_Os03g41780.1|6|1) FN3833-S.SNP.3:23209851 chr03:023209851 0 W/23209851-23209851 FN3833-S SNP C -> T AC=2;AN=190;BQB=0.758345;DP=3194;DP4=1658,1433,20,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.65792e-15;MQSB=0.996813;RPB=0.566043;SGB=107.178;VDB=0.433485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T420I|562|LOC_Os03g41790|protein_coding|CODING|LOC_Os03g41790.1|2|1) FN-316.SNP.3:23211887 chr03:023211887 0 W/23211887-23211887 FN-316 Single Base Substitution C-G INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2599-S.SNP.3:23218774 chr03:023218774 0 W/23218774-23218774 FN2599-S SNP A -> G AC=2;AN=198;BQB=0.940195;DP=4242;DP4=1997,2007,22,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.03336e-26;MQSB=0.998345;RPB=0.457128;SGB=162.383;VDB=0.810728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.3:23222044 chr03:023222044 0 W/23222044-23222044 FN1271-S Single Base Substitution G-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2417.SNP.3:23222227 chr03:023222227 0 W/23222227-23222227 FN2417 SNP T -> C AC=1;AN=200;BQB=0.237869;DP=4568;DP4=2304,2031,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01065e-06;MQSB=0.971168;RPB=0.592651;SGB=40.4492;VDB=0.482741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.3:23223454 chr03:023223454 0 W/23223454-23223454 FN2239-S SNP A -> T AC=2;AN=190;BQB=0.557095;DP=4822;DP4=2180,2181,20,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.80867e-21;MQSB=0.260285;RPB=0.61589;SGB=128.501;VDB=0.44737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.3:23227061 chr03:023227061 0 W/23227061-23227061 FN2342 SNP T -> C AC=1;AN=192;BQB=0.36672;DP=4498;DP4=2200,1773,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.70831e-06;MQSB=0.58567;RPB=0.099554;SGB=-35.3278;VDB=0.394633;EFF=INTERGENIC(MODIFIER||||||||||1) FN506-S.SNP.3:23234238 chr03:023234238 0 W/23234238-23234238 FN506-S Single Base Substitution G-C INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN1356-S.SNP.3:23234876 chr03:023234876 0 W/23234876-23234876 FN1356-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2500.SNP.3:23237599 chr03:023237599 0 W/23237599-23237599 FN2500 SNP T -> A AC=2;AN=200;BQB=0.86237;DP=4245;DP4=1763,2054,23,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.60939e-19;MQSB=0.885631;RPB=0.623384;SGB=-43.2122;VDB=0.0773705;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.3:23242290 chr03:023242290 0 W/23242290-23242290 FN3885-S SNP T -> C AC=1;AN=158;BQB=0.786482;DP=2323;DP4=1208,1030,15,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000860956;MQB=1.2142e-10;MQSB=0.039975;RPB=0.329313;SGB=54.2901;VDB=0.292775;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.3:23248550 chr03:023248550 0 W/23248550-23248550 FN1561-S Single Base Substitution C-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-181.SNP.3:23251196 chr03:023251196 0 W/23251196-23251196 FN-181 Single Base Substitution G-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1415-S.SNP.3:23252003 chr03:023252003 0 W/23252003-23252003 FN1415-S Single Base Substitution C-G INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2492.SNP.3:23252037 chr03:023252037 0 W/23252037-23252037 FN2492 SNP C -> A AC=1;AN=200;BQB=0.839399;DP=5293;DP4=2616,2368,7,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0013225;MQB=2.85857e-05;MQSB=0.000254592;RPB=0.963133;SGB=29.4541;VDB=0.976556;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.3:23255080 chr03:023255080 0 W/23255080-23255080 FN400-S Single Base Substitution A-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1026-S.SNP.3:23269234 chr03:023269234 0 W/23269234-23269234 FN1026-S Single Base Substitution A-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN3750-S.SNP.3:23273681 chr03:023273681 0 W/23273681-23273681 FN3750-S SNP C -> T AC=2;AN=190;BQB=0.985566;DP=2716;DP4=1245,1348,21,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.28218e-24;MQSB=0.998029;RPB=0.186001;SGB=189.311;VDB=0.614643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.3:23273744 chr03:023273744 0 W/23273744-23273744 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.749742;DP=2709;DP4=1268,1351,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19128e-06;MQSB=0.93245;RPB=0.794332;SGB=44.5415;VDB=0.8548;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.3:23281340 chr03:023281340 0 W/23281340-23281340 FN1096-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3540-S.SNP.3:23285144 chr03:023285144 0 W/23285144-23285144 FN3540-S SNP T -> G AC=1;AN=188;BQB=0.983844;DP=3009;DP4=1379,1430,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.95291e-07;MQSB=0.939977;RPB=0.668692;SGB=18.4463;VDB=0.636384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Ccc|T122P|332|LOC_Os03g41920|protein_coding|CODING|LOC_Os03g41920.1|1|1) FN1394-S.SNP.3:23287567 chr03:023287567 0 W/23287567-23287567 FN1394-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1392-S.SNP.3:23301318 chr03:023301318 0 W/23301318-23301318 FN1392-S Single Base Substitution G-A INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2673-S.SNP.3:23303767 chr03:023303767 0 W/23303767-23303767 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.9079;DP=4610;DP4=2122,2246,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.65096e-08;MQSB=0.941494;RPB=0.999012;SGB=33.0593;VDB=0.971143;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R2711|2784|LOC_Os03g41960|protein_coding|CODING|LOC_Os03g41960.1|15|1) FN2707-S.SNP.3:23303977 chr03:023303977 0 W/23303977-23303977 FN2707-S SNP T -> C AC=1;AN=200;BQB=0.111707;DP=4627;DP4=2127,2238,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45096e-11;MQSB=0.956665;RPB=0.380594;SGB=32.0901;VDB=0.735046;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T2641|2784|LOC_Os03g41960|protein_coding|CODING|LOC_Os03g41960.1|15|1) FN1121-S.SNP.3:23307834 chr03:023307834 0 W/23307834-23307834 FN1121-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3398-S.SNP.3:23311118 chr03:023311118 0 W/23311118-23311118 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.801897;DP=2838;DP4=1144,1608,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0331219;MQB=0.0315186;MQSB=1.66755e-42;RPB=0.993985;SGB=32.2261;VDB=0.301259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R901H|2784|LOC_Os03g41960|protein_coding|CODING|LOC_Os03g41960.1|9|1) FN2242-S.SNP.3:23313027 chr03:023313027 0 W/23313027-23313027 FN2242-S SNP G -> C AC=1;AN=190;BQB=0.480647;DP=5506;DP4=2830,2386,17,4;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.270614;MQB=0.593959;MQSB=0;RPB=0.859637;SGB=13.4344;VDB=0.802827;EFF=INTRON(MODIFIER||||2784|LOC_Os03g41960|protein_coding|CODING|LOC_Os03g41960.1|7|1) FN-380.SNP.3:23320938 chr03:023320938 0 W/23320938-23320938 FN-380 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os03g41970 retrotransposon protein, putative, unclassified SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2140-S.SNP.3:23323707 chr03:023323707 0 W/23323707-23323707 FN2140-S SNP A -> C AC=1;AN=168;BQB=0.921781;DP=1951;DP4=1090,811,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.017427;MQB=0.0782525;MQSB=0.4658;RPB=0.961085;SGB=31.908;VDB=0.596749;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y358S|1878|LOC_Os03g41980|protein_coding|CODING|LOC_Os03g41980.1|1|1) FN2283.SNP.3:23324511 chr03:023324511 0 W/23324511-23324511 FN2283 SNP G -> A AC=1;AN=192;BQB=0.0386045;DP=5226;DP4=2649,2291,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0244929;MQB=0.507312;MQSB=6.76901e-15;RPB=0.574464;SGB=71.8591;VDB=0.335581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R556H|1878|LOC_Os03g41980|protein_coding|CODING|LOC_Os03g41980.1|2|1) FN968-S.SNP.3:23328835 chr03:023328835 0 W/23328835-23328835 FN968-S Single Base Substitution G-T INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN564-S.SNP.3:23330590 chr03:023330590 0 W/23330590-23330590 FN564-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g41990 retrotransposon protein, putative, unclassified, expressed SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN974-S.SNP.3:23335847 chr03:023335847 0 W/23335847-23335847 FN974-S Single Base Substitution A-T INTRON HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3512-S.SNP.3:23339286 chr03:023339286 0 W/23339286-23339286 FN3512-S SNP G -> A AC=1;AN=188;BQB=0.998923;DP=2773;DP4=1341,1375,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71313e-07;MQSB=0.920402;RPB=0.723111;SGB=28.8977;VDB=0.175884;EFF=INTRON(MODIFIER||||617|LOC_Os03g42010|protein_coding|CODING|LOC_Os03g42010.1|11|1),INTRON(MODIFIER||||616|LOC_Os03g42010|protein_coding|CODING|LOC_Os03g42010.2|11|1) FN2221-S.SNP.3:23341136 chr03:023341136 0 W/23341136-23341136 FN2221-S SNP T -> G AC=2;AN=190;BQB=0.664734;DP=4852;DP4=2469,2039,27,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.01699e-29;MQSB=0.311134;RPB=0.943936;SGB=58.4968;VDB=0.178564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:23341789 chr03:023341789 0 W/23341789-23341789 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.811812;DP=2775;DP4=1361,1204,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54253e-07;MQSB=0.443128;RPB=0.822314;SGB=15.9981;VDB=0.977008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.3:23341790 chr03:023341790 0 W/23341790-23341790 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.962811;DP=2771;DP4=1415,1191,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.17785e-06;MQSB=0.264359;RPB=0.906592;SGB=28.9929;VDB=0.968488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.3:23342570 chr03:023342570 0 W/23342570-23342570 FN2637-S SNP C -> T AC=2;AN=200;BQB=0.332215;DP=5085;DP4=2524,2270,23,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.41646e-23;MQSB=0.964664;RPB=0.997343;SGB=144.819;VDB=0.262895;EFF=INTRON(MODIFIER||||1033|LOC_Os03g42020|protein_coding|CODING|LOC_Os03g42020.1|1|1) FN2209-S.SNP.3:23348111 chr03:023348111 0 W/23348111-23348111 FN2209-S SNP G -> T AC=1;AN=190;BQB=0.325356;DP=4914;DP4=2553,1981,17,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49801e-16;MQSB=0.903194;RPB=0.999936;SGB=32.0809;VDB=0.88664;EFF=INTERGENIC(MODIFIER||||||||||1) FN-148.SNP.3:23352188 chr03:023352188 0 W/23352188-23352188 FN-148 Single Base Substitution C-T INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2686-S.SNP.3:23359823 chr03:023359823 0 W/23359823-23359823 FN2686-S SNP C -> G AC=1;AN=200;BQB=0.604307;DP=3306;DP4=1174,1876,2,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00030248;MQB=2.1033e-05;MQSB=8.35219e-19;RPB=0.997931;SGB=40.4492;VDB=0.346864;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtC|V286|1182|LOC_Os03g42040|protein_coding|CODING|LOC_Os03g42040.1|1|1) FN-140.SNP.3:23365620 chr03:023365620 0 W/23365620-23365620 FN-140 Single Base Substitution C-T INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN915-S.SNP.3:23374544 chr03:023374544 0 W/23374544-23374544 FN915-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g42050 exportin-7-A, putative, expressed SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN1140-S.SNP.3:23382138 chr03:023382138 0 W/23382138-23382138 FN1140-S Single Base Substitution C-G INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4001-S.SNP.3:23385804 chr03:023385804 0 W/23385804-23385804 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.997354;DP=2043;DP4=1117,849,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.93434e-05;MQSB=0.991671;RPB=0.999741;SGB=38.8805;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.3:23394013 chr03:023394013 0 W/23394013-23394013 FN4011-S SNP G -> A AC=2;AN=168;BQB=0.912995;DP=2930;DP4=1595,1201,24,15;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.0122867;MQB=2.2808e-16;MQSB=0.985677;RPB=0.921882;SGB=123.949;VDB=0.674991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.3:23397017 chr03:023397017 0 W/23397017-23397017 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.633289;DP=4231;DP4=2054,1805,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56426e-12;MQSB=0.896753;RPB=0.91499;SGB=39.7248;VDB=0.740198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.3:23398240 chr03:023398240 0 W/23398240-23398240 FN2295 SNP C -> T AC=1;AN=192;BQB=0.993641;DP=4543;DP4=2054,2224,17,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.19259e-19;MQSB=0.968368;RPB=0.644028;SGB=32.3844;VDB=0.552414;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.3:23402780 chr03:023402780 0 W/23402780-23402780 FN970-S Single Base Substitution A-C INTERGENIC HOMO SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN2469.SNP.3:23405536 chr03:023405536 0 W/23405536-23405536 FN2469 SNP A -> G AC=1;AN=200;BQB=0.99088;DP=4772;DP4=2409,2087,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.14529e-11;MQSB=0.636487;RPB=0.672785;SGB=34.6953;VDB=0.0342123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.3:23409030 chr03:023409030 0 W/23409030-23409030 FN3723-S SNP A -> G AC=1;AN=190;BQB=0.992514;DP=2621;DP4=1114,1401,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.91622e-08;MQSB=0.99094;RPB=0.922823;SGB=58.2031;VDB=0.328077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.3:23415382 chr03:023415382 0 W/23415382-23415382 FN1551-S Single Base Substitution T-C INTERGENIC Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1206-S.SNP.3:23416423 chr03:023416423 0 W/23416423-23416423 FN1206-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN-298.SNP.3:23416705 chr03:023416705 0 W/23416705-23416705 FN-298 Single Base Substitution T-A INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2435.SNP.3:23417179 chr03:023417179 0 W/23417179-23417179 FN2435 SNP C -> T AC=1;AN=200;BQB=0.994617;DP=4083;DP4=1925,1981,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000229948;MQSB=0.813526;RPB=0.998779;SGB=40.4492;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.3:23418959 chr03:023418959 0 W/23418959-23418959 FN3311-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3985-S.SNP.3:23429493 chr03:023429493 0 W/23429493-23429493 FN3985-S SNP G -> A AC=1;AN=168;BQB=0.999927;DP=2284;DP4=1206,926,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52777e-08;MQSB=0.879352;RPB=0.893225;SGB=61.0344;VDB=0.96562;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.3:23431183 chr03:023431183 0 W/23431183-23431183 FN75-S-43 SNP C -> T AC=1;AN=190;BQB=0.21704;DP=4614;DP4=2146,2132,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73279e-11;MQSB=0.363962;RPB=0.139272;SGB=75.1932;VDB=0.356814;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.3:23435182 chr03:023435182 0 W/23435182-23435182 FN4160-S SNP T -> G AC=2;AN=170;BQB=0.461815;DP=2474;DP4=1225,1153,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.62852e-14;MQSB=0.922651;RPB=0.592999;SGB=83.0751;VDB=0.870098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.3:23441733 chr03:023441733 0 W/23441733-23441733 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.570299;DP=4008;DP4=1872,1842,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32421e-07;MQSB=0.858905;RPB=0.909716;SGB=16.3688;VDB=0.800523;EFF=INTRON(MODIFIER||||415|LOC_Os03g42110|protein_coding|CODING|LOC_Os03g42110.1|1|1) FN2691-S.SNP.3:23450769 chr03:023450769 0 W/23450769-23450769 FN2691-S SNP C -> A AC=2;AN=200;BQB=0.998345;DP=5434;DP4=2814,2359,28,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.51564e-32;MQSB=0.985714;RPB=0.861003;SGB=177.266;VDB=0.0983066;EFF=INTRON(MODIFIER||||352|LOC_Os03g42130|protein_coding|CODING|LOC_Os03g42130.1|2|1) FN2691-S.SNP.3:23450771 chr03:023450771 0 W/23450771-23450771 FN2691-S SNP T -> A AC=2;AN=200;BQB=0.989616;DP=5438;DP4=2831,2370,28,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.23499e-31;MQSB=0.995218;RPB=0.877413;SGB=180.871;VDB=0.0995627;EFF=INTRON(MODIFIER||||352|LOC_Os03g42130|protein_coding|CODING|LOC_Os03g42130.1|2|1) FN927-S.SNP.3:23457074 chr03:023457074 0 W/23457074-23457074 FN927-S Single Base Substitution C-T INTRON HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1655-S.SNP.3:23460090 chr03:023460090 0 W/23460090-23460090 FN1655-S Single Base Substitution T-C INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1293-S.SNP.3:23461589 chr03:023461589 0 W/23461589-23461589 FN1293-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g42170 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1293-S.SNP.3:23461590 chr03:023461590 0 W/23461590-23461590 FN1293-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g42170 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN994-S.SNP.3:23474208 chr03:023474208 0 W/23474208-23474208 FN994-S Single Base Substitution A-T INTRON HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN1403-S.SNP.3:23478050 chr03:023478050 0 W/23478050-23478050 FN1403-S Single Base Substitution G-T INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN804-S.SNP.3:23478170 chr03:023478170 0 W/23478170-23478170 FN804-S Single Base Substitution T-A INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2797-S.SNP.3:23478195 chr03:023478195 0 W/23478195-23478195 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.999598;DP=3820;DP4=1741,1899,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00026178;MQB=5.30171e-07;MQSB=0.972402;RPB=0.505332;SGB=29.3637;VDB=0.417004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.3:23481040 chr03:023481040 0 W/23481040-23481040 FN1655-S Single Base Substitution T-A INTERGENIC Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN3443-S.SNP.3:23482173 chr03:023482173 0 W/23482173-23482173 FN3443-S SNP A -> T AC=2;AN=184;BQB=0.879563;DP=2671;DP4=1211,1305,14,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.208e-16;MQSB=0.964514;RPB=0.880357;SGB=31.1509;VDB=0.402257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.3:23484289 chr03:023484289 0 W/23484289-23484289 FN1415-S Single Base Substitution G-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2260-S.SNP.3:23487007 chr03:023487007 0 W/23487007-23487007 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.935266;DP=4915;DP4=2251,2294,20,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19561e-20;MQSB=0.748424;RPB=0.877983;SGB=74.7373;VDB=0.695567;EFF=INTRON(MODIFIER||||525|LOC_Os03g42220|protein_coding|CODING|LOC_Os03g42220.1|1|1),INTRON(MODIFIER||||500|LOC_Os03g42220|protein_coding|CODING|LOC_Os03g42220.2|1|1) FN914-S.SNP.3:23491897 chr03:023491897 0 W/23491897-23491897 FN914-S Single Base Substitution A-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1650-S.SNP.3:23492601 chr03:023492601 0 W/23492601-23492601 FN1650-S Single Base Substitution C-G UTR_5_PRIME Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2419.SNP.3:23497964 chr03:023497964 0 W/23497964-23497964 FN2419 SNP T -> C AC=1;AN=200;BQB=0.901085;DP=4296;DP4=2107,1899,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68479e-13;MQSB=0.440327;RPB=0.184342;SGB=25.5416;VDB=0.209444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.3:23500503 chr03:023500503 0 W/23500503-23500503 FN1366-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g42240 B3 DNA binding domain containing protein, expressed SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2755-S.SNP.3:23504046 chr03:023504046 0 W/23504046-23504046 FN2755-S SNP C -> T AC=2;AN=200;BQB=0.37632;DP=4998;DP4=2322,2344,37,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.30016e-34;MQSB=0.995156;RPB=0.879419;SGB=138.902;VDB=0.503122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.3:23512039 chr03:023512039 0 W/23512039-23512039 FN3890-S SNP T -> C AC=1;AN=158;BQB=0.999346;DP=2430;DP4=1059,1286,7,16;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.52827e-13;MQSB=0.999754;RPB=0.119056;SGB=95.131;VDB=0.282317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.3:23528387 chr03:023528387 0 W/23528387-23528387 FN1027-S Single Base Substitution G-C INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2112-S.SNP.3:23529157 chr03:023529157 0 W/23529157-23529157 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.00253837;DP=4146;DP4=2083,2023,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.21715e-06;MQSB=0.999254;RPB=0.823585;SGB=-205.192;VDB=0.498541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.3:23531740 chr03:023531740 0 W/23531740-23531740 FN2112-S SNP T -> C AC=1;AN=168;BQB=0.56069;DP=4010;DP4=2123,1822,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.44424e-11;MQSB=0.901853;RPB=0.761035;SGB=14.2064;VDB=0.0749931;EFF=INTERGENIC(MODIFIER||||||||||1) 703-4.SNP.3:23531932 chr03:023531932 0 W/23531932-23531932 703-4 Single Base Substitution T-A INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. 703-4.SNP.3:23531933 chr03:023531933 0 W/23531933-23531933 703-4 Single Base Substitution C-A INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN1209-S.SNP.3:23532069 chr03:023532069 0 W/23532069-23532069 FN1209-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN498-S.SNP.3:23533057 chr03:023533057 0 W/23533057-23533057 FN498-S Single Base Substitution G-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2311.SNP.3:23534607 chr03:023534607 0 W/23534607-23534607 FN2311 SNP G -> A AC=1;AN=192;BQB=0.999792;DP=5328;DP4=2384,2602,8,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.86302e-12;MQSB=0.988729;RPB=0.866473;SGB=-9.12519;VDB=0.992991;EFF=INTRON(MODIFIER||||349|LOC_Os03g42290|protein_coding|CODING|LOC_Os03g42290.1|1|1) FN-159.SNP.3:23534818 chr03:023534818 0 W/23534818-23534818 FN-159 Single Base Substitution A-T INTRON HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2462.SNP.3:23537559 chr03:023537559 0 W/23537559-23537559 FN2462 SNP C -> T AC=1;AN=200;BQB=0.997368;DP=4636;DP4=2336,2031,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2501e-08;MQSB=0.924929;RPB=0.834946;SGB=19.0642;VDB=0.555385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T217I|349|LOC_Os03g42290|protein_coding|CODING|LOC_Os03g42290.1|6|1) FN3466-S.SNP.3:23539976 chr03:023539976 0 W/23539976-23539976 FN3466-S SNP A -> T AC=2;AN=184;BQB=0.952382;DP=3062;DP4=1542,1351,30,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.42584e-23;MQSB=0.835003;RPB=0.685692;SGB=179.874;VDB=0.685482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.3:23547441 chr03:023547441 0 W/23547441-23547441 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.830398;DP=2933;DP4=1157,1411,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000340948;MQB=8.35103e-09;MQSB=0.824271;RPB=0.998749;SGB=28.3187;VDB=0.86704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M16V|623|LOC_Os03g42320|protein_coding|CODING|LOC_Os03g42320.1|2|1) FN-81.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN-81 Single Base Substitution C-T INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1290-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN1290-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1336-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN1336-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1358-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1513-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN1513-S Single Base Substitution C-T INTERGENIC Homo SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1579-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN1579-S Single Base Substitution C-T INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2451.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN2451 SNP C -> T AC=1;AN=200;BQB=0.392228;DP=4793;DP4=2563,1994,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94515e-18;MQSB=0.972486;RPB=0.601361;SGB=60.747;VDB=0.955904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.980863;DP=4066;DP4=2148,1716,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.13937e-14;MQSB=0.978364;RPB=0.38882;SGB=-100.25;VDB=0.456262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.995859;DP=2664;DP4=1424,1160,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.03942e-09;MQSB=0.97549;RPB=0.488622;SGB=39.5276;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.936511;DP=2953;DP4=1540,1274,15,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.63319e-10;MQSB=0.754881;RPB=0.928951;SGB=50.3161;VDB=0.11727;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN833-S Single Base Substitution C-T INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN914-S.SNP.3:23552634 chr03:023552634 0 W/23552634-23552634 FN914-S Single Base Substitution C-T INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN_789-3-1.SNP.3:23565838 chr03:023565838 0 W/23565838-23565838 FN_789-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2200-S.SNP.3:23571815 chr03:023571815 0 W/23571815-23571815 FN2200-S SNP T -> A AC=1;AN=190;BQB=0.758846;DP=4654;DP4=2276,2027,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000429738;MQB=1.55362e-12;MQSB=0.624146;RPB=0.682;SGB=44.0907;VDB=0.30529;EFF=INTRON(MODIFIER||||581|LOC_Os03g42370|protein_coding|CODING|LOC_Os03g42370.1|9|1) FN-192.SNP.3:23584750 chr03:023584750 0 W/23584750-23584750 FN-192 Single Base Substitution A-C INTRON HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN570-S.SNP.3:23586134 chr03:023586134 0 W/23586134-23586134 FN570-S Single Base Substitution A-G INTRON HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN770-S.SNP.3:23590116 chr03:023590116 0 W/23590116-23590116 FN770-S Single Base Substitution T-A INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2754-S.SNP.3:23592016 chr03:023592016 0 W/23592016-23592016 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.917382;DP=4687;DP4=2130,2344,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51016e-10;MQSB=0.830321;RPB=0.897229;SGB=26.8797;VDB=0.0654296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.3:23592191 chr03:023592191 0 W/23592191-23592191 FN-316 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g42400 expressed protein SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1233-S.SNP.3:23593399 chr03:023593399 0 W/23593399-23593399 FN1233-S Single Base Substitution A-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3783-S.SNP.3:23594977 chr03:023594977 0 W/23594977-23594977 FN3783-S SNP T -> C AC=1;AN=190;BQB=0.997029;DP=2314;DP4=1033,1207,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.5993e-11;MQSB=0.971114;RPB=0.964763;SGB=71.8647;VDB=0.92669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.3:23598443 chr03:023598443 0 W/23598443-23598443 FN1317-S Single Base Substitution A-G INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. 703-4.SNP.3:23598722 chr03:023598722 0 W/23598722-23598722 703-4 Single Base Substitution C-T INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2173-S.SNP.3:23601416 chr03:023601416 0 W/23601416-23601416 FN2173-S SNP A -> C AC=1;AN=168;BQB=0.146854;DP=3678;DP4=1593,2045,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8729e-10;MQSB=0.994739;RPB=0.850541;SGB=-71.2065;VDB=0.0719945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.3:23602268 chr03:023602268 0 W/23602268-23602268 FN1440-S Single Base Substitution C-A INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN3896-S.SNP.3:23603203 chr03:023603203 0 W/23603203-23603203 FN3896-S SNP T -> A AC=2;AN=158;BQB=0.938481;DP=2159;DP4=1084,995,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.22002e-12;MQSB=0.906867;RPB=0.969474;SGB=99.5005;VDB=0.943071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.3:23607570 chr03:023607570 0 W/23607570-23607570 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.896719;DP=2330;DP4=1123,1146,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.59803e-08;MQSB=0.79549;RPB=0.992907;SGB=49.0954;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.3:23608312 chr03:023608312 0 W/23608312-23608312 FN2593-S SNP C -> A AC=1;AN=198;BQB=0.240845;DP=3331;DP4=1222,1964,11,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.56579e-18;MQSB=0.886799;RPB=0.611419;SGB=127.666;VDB=0.918379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.3:23608456 chr03:023608456 0 W/23608456-23608456 FN2223-S SNP G -> A AC=2;AN=190;BQB=0.626071;DP=3197;DP4=1359,1490,14,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.39586e-22;MQSB=0.244886;RPB=0.208236;SGB=185.712;VDB=0.941851;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.3:23612071 chr03:023612071 0 W/23612071-23612071 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.131835;DP=2541;DP4=1511,896,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000393546;MQB=0.00351783;MQSB=0.224662;RPB=0.982425;SGB=15.9981;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.3:23616277 chr03:023616277 0 W/23616277-23616277 FN1537-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1020-S.SNP.3:23619771 chr03:023619771 0 W/23619771-23619771 FN1020-S Single Base Substitution A-T INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN3387-S.SNP.3:23622225 chr03:023622225 0 W/23622225-23622225 FN3387-S SNP C -> A AC=1;AN=184;BQB=0.938613;DP=2777;DP4=1430,1251,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.93386e-06;MQSB=0.949346;RPB=0.677415;SGB=8.14452;VDB=0.050184;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.3:23623993 chr03:023623993 0 W/23623993-23623993 FN851-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN851-S.SNP.3:23623994 chr03:023623994 0 W/23623994-23623994 FN851-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3480-S.SNP.3:23637182 chr03:023637182 0 W/23637182-23637182 FN3480-S SNP T -> A AC=2;AN=184;BQB=0.999279;DP=4011;DP4=1997,1751,28,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.2338e-23;MQSB=0.930531;RPB=0.363961;SGB=106.494;VDB=0.373322;EFF=INTRON(MODIFIER||||94|LOC_Os03g42480|protein_coding|CODING|LOC_Os03g42480.1|2|1),INTRON(MODIFIER||||85|LOC_Os03g42480|protein_coding|CODING|LOC_Os03g42480.2|2|1) FN2619-S.SNP.3:23637422 chr03:023637422 0 W/23637422-23637422 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.999814;DP=4051;DP4=1683,2122,19,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.90967e-27;MQSB=0.69845;RPB=0.770482;SGB=151.598;VDB=0.467995;EFF=INTRON(MODIFIER||||94|LOC_Os03g42480|protein_coding|CODING|LOC_Os03g42480.1|2|1),INTRON(MODIFIER||||85|LOC_Os03g42480|protein_coding|CODING|LOC_Os03g42480.2|2|1) FN1473-S.SNP.3:23649278 chr03:023649278 0 W/23649278-23649278 FN1473-S Single Base Substitution G-A INTRON HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN3527-S.SNP.3:23649415 chr03:023649415 0 W/23649415-23649415 FN3527-S SNP G -> A AC=1;AN=188;BQB=0.846441;DP=4085;DP4=2202,1791,4,13;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.0942472;MQB=0.472166;MQSB=0.0245872;RPB=0.865572;SGB=71.6954;VDB=0.478799;EFF=INTRON(MODIFIER||||701|LOC_Os03g42510|protein_coding|CODING|LOC_Os03g42510.1|3|1) FN2381.SNP.3:23649476 chr03:023649476 0 W/23649476-23649476 FN2381 SNP C -> T AC=1;AN=192;BQB=0.000849797;DP=6475;DP4=3146,2922,22,16;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.0713513;MQB=0.947303;MQSB=1.77353e-06;RPB=0.502451;SGB=-87.4713;VDB=0.0482869;EFF=INTRON(MODIFIER||||701|LOC_Os03g42510|protein_coding|CODING|LOC_Os03g42510.1|3|1) FN2421.SNP.3:23649648 chr03:023649648 0 W/23649648-23649648 FN2421 SNP G -> A AC=1;AN=200;BQB=0.441869;DP=5196;DP4=2099,2727,13,18;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0558122;MQB=0.997331;MQSB=0.216356;RPB=0.472957;SGB=65.9573;VDB=0.888607;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q312*|701|LOC_Os03g42510|protein_coding|CODING|LOC_Os03g42510.1|3|1);LOF=(LOC_Os03g42510|LOC_Os03g42510|1|1.00);NMD=(LOC_Os03g42510|LOC_Os03g42510|1|1.00) FN2666-S.SNP.3:23651742 chr03:023651742 0 W/23651742-23651742 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.896894;DP=6658;DP4=3620,2662,10,9;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.188345;MQB=0.173972;MQSB=4.99964e-35;RPB=0.0315242;SGB=58.2954;VDB=0.1134;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.3:23655335 chr03:023655335 0 W/23655335-23655335 FN476-S Single Base Substitution C-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.3:23655335 chr03:023655335 0 W/23655335-23655335 FN935-S Single Base Substitution C-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN354-S.SNP.3:23659694 chr03:023659694 0 W/23659694-23659694 FN354-S Single Base Substitution G-A INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3376-S.SNP.3:23665874 chr03:023665874 0 W/23665874-23665874 FN3376-S SNP G -> A AC=1;AN=184;BQB=0.933037;DP=2973;DP4=1418,1444,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.37903e-12;MQSB=0.971233;RPB=0.739755;SGB=78.0093;VDB=0.434757;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G569R|715|LOC_Os03g42530|protein_coding|CODING|LOC_Os03g42530.1|4|1) FN1448-S.SNP.3:23666282 chr03:023666282 0 W/23666282-23666282 FN1448-S Single Base Substitution C-G INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1156-XA21.SNP.3:23666559 chr03:023666559 0 W/23666559-23666559 FN1156-XA21 Single Base Substitution G-A INTRON Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN-116.SNP.3:23667437 chr03:023667437 0 W/23667437-23667437 FN-116 Single Base Substitution G-A STOP_GAINED HET LOC_Os03g42530 retrotransposon, putative, centromere-specific, expressed SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN2240-S.SNP.3:23671801 chr03:023671801 0 W/23671801-23671801 FN2240-S SNP C -> T AC=2;AN=190;BQB=0.669614;DP=5196;DP4=2425,2411,23,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86849e-25;MQSB=0.997755;RPB=0.908762;SGB=97.7221;VDB=0.329048;EFF=INTRON(MODIFIER||||340|LOC_Os03g42540|protein_coding|CODING|LOC_Os03g42540.1|1|1) FN-252.SNP.3:23673410 chr03:023673410 0 W/23673410-23673410 FN-252 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g42540 transposon protein, putative, CACTA, En/Spm sub-class SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN_N1-150-1.SNP.3:23677164 chr03:023677164 0 W/23677164-23677164 FN_N1-150-1 Single Base Substitution A-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1011-S.SNP.3:23677737 chr03:023677737 0 W/23677737-23677737 FN1011-S Single Base Substitution C-T INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1412-S.SNP.3:23685594 chr03:023685594 0 W/23685594-23685594 FN1412-S Single Base Substitution T-C INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1493-S.SNP.3:23687987 chr03:023687987 0 W/23687987-23687987 FN1493-S Single Base Substitution G-A INTERGENIC Homo SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3834-S.SNP.3:23687987 chr03:023687987 0 W/23687987-23687987 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.888949;DP=2824;DP4=1208,1491,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08601e-09;MQSB=0.882116;RPB=0.851434;SGB=23.6597;VDB=0.759468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.3:23698880 chr03:023698880 0 W/23698880-23698880 FN1068-S Single Base Substitution G-A INTRON HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2479.SNP.3:23699864 chr03:023699864 0 W/23699864-23699864 FN2479 SNP C -> T AC=1;AN=200;BQB=0.271718;DP=3946;DP4=1725,1908,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000253421;MQB=4.48353e-06;MQSB=0.160831;RPB=0.940067;SGB=1.46408;VDB=0.646037;EFF=INTRON(MODIFIER||||85|LOC_Os03g42569|protein_coding|CODING|LOC_Os03g42569.1|1|1) FN2267-S.SNP.3:23706154 chr03:023706154 0 W/23706154-23706154 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.861565;DP=3985;DP4=2415,1329,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.71025e-07;MQSB=0.434485;RPB=0.228336;SGB=-12.6681;VDB=0.909527;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.3:23707411 chr03:023707411 0 W/23707411-23707411 FN509-S Single Base Substitution G-A INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3565-S.SNP.3:23707534 chr03:023707534 0 W/23707534-23707534 FN3565-S SNP G -> A AC=1;AN=188;BQB=0.999737;DP=3446;DP4=1714,1661,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.88763e-13;MQSB=0.951603;RPB=0.827614;SGB=16.3413;VDB=0.325814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.3:23712183 chr03:023712183 0 W/23712183-23712183 FN2203-S SNP A -> T AC=1;AN=190;BQB=0.751364;DP=5548;DP4=2537,2631,20,26;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08068e-23;MQSB=0.946492;RPB=0.960827;SGB=52.2813;VDB=0.689157;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.3:23721164 chr03:023721164 0 W/23721164-23721164 FN739-S Single Base Substitution A-T INTRON HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1740-S.SNP.3:23722743 chr03:023722743 0 W/23722743-23722743 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.630123;DP=3971;DP4=1781,2072,16,13;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00906573;MQB=1.72873e-06;MQSB=0.0281762;RPB=0.987073;SGB=-41.4749;VDB=0.798109;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A260T|1523|LOC_Os03g42610|protein_coding|CODING|LOC_Os03g42610.1|2|1) FN2455.SNP.3:23724140 chr03:023724140 0 W/23724140-23724140 FN2455 SNP A -> G AC=1;AN=200;BQB=0.845498;DP=3798;DP4=1723,1754,3,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0129015;MQB=0.352064;MQSB=5.09243e-06;RPB=0.615936;SGB=13.8539;VDB=0.534701;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.3:23730811 chr03:023730811 0 W/23730811-23730811 W23-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN1410-S.SNP.3:23731131 chr03:023731131 0 W/23731131-23731131 FN1410-S Single Base Substitution G-T INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2373.SNP.3:23731305 chr03:023731305 0 W/23731305-23731305 FN2373 SNP T -> A AC=2;AN=192;BQB=0.494435;DP=3164;DP4=2216,664,14,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.58833e-14;MQSB=0.868816;RPB=0.989796;SGB=21.4339;VDB=0.509053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.3:23738296 chr03:023738296 0 W/23738296-23738296 FN1332-S Single Base Substitution C-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2637-S.SNP.3:23750183 chr03:023750183 0 W/23750183-23750183 FN2637-S SNP C -> A AC=2;AN=200;BQB=0.0579433;DP=5151;DP4=2471,2368,24,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.95664e-26;MQSB=0.665597;RPB=0.0590262;SGB=192.42;VDB=0.801584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.3:23762089 chr03:023762089 0 W/23762089-23762089 FN1255-S Single Base Substitution T-C INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3459-S.SNP.3:23762894 chr03:023762894 0 W/23762894-23762894 FN3459-S SNP G -> C AC=2;AN=184;BQB=0.986123;DP=3409;DP4=1496,1775,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.30982e-14;MQSB=0.0326188;RPB=0.379783;SGB=88.5747;VDB=0.277542;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.3:23765606 chr03:023765606 0 W/23765606-23765606 FN3948-S SNP G -> T AC=1;AN=168;BQB=0.827203;DP=3404;DP4=1784,1494,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00587544;MQB=0.0146656;MQSB=1.21019e-21;RPB=0.806369;SGB=87.6193;VDB=0.851797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A461D|641|LOC_Os03g42660|protein_coding|CODING|LOC_Os03g42660.1|2|1) FN3509-S.SNP.3:23765819 chr03:023765819 0 W/23765819-23765819 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.892669;DP=6143;DP4=3216,2826,9,17;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.000708762;MQSB=0;RPB=0.742832;SGB=82.0471;VDB=0.439581;EFF=INTRON(MODIFIER||||641|LOC_Os03g42660|protein_coding|CODING|LOC_Os03g42660.1|1|1) FN2664-S.SNP.3:23771096 chr03:023771096 0 W/23771096-23771096 FN2664-S SNP A -> C AC=1;AN=200;BQB=0.841529;DP=4955;DP4=2492,2259,17,17;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00524723;MQB=3.33804e-07;MQSB=0.271812;RPB=0.996569;SGB=35.1726;VDB=0.55961;EFF=INTRON(MODIFIER||||509|LOC_Os03g42670|protein_coding|CODING|LOC_Os03g42670.1|8|1) FN2332.SNP.3:23775983 chr03:023775983 0 W/23775983-23775983 FN2332 SNP T -> A AC=1;AN=192;BQB=0.937174;DP=4157;DP4=1540,2280,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00312726;MQB=1.47185e-07;MQSB=0.00205425;RPB=0.985089;SGB=49.4287;VDB=0.426649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F506I|912|LOC_Os03g42690|protein_coding|CODING|LOC_Os03g42690.1|3|1) FN2704-S.SNP.3:23776295 chr03:023776295 0 W/23776295-23776295 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.995388;DP=4075;DP4=2135,1686,20,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000981595;MQB=1.30046e-12;MQSB=0.256522;RPB=0.482777;SGB=101.557;VDB=0.26744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P610S|912|LOC_Os03g42690|protein_coding|CODING|LOC_Os03g42690.1|3|1) FN2440.SNP.3:23780685 chr03:023780685 0 W/23780685-23780685 FN2440 SNP G -> A AC=1;AN=200;BQB=0.963721;DP=4918;DP4=2165,2494,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203335;MQB=2.18891e-13;MQSB=0.997238;RPB=0.920535;SGB=91.1059;VDB=0.189032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.3:23781548 chr03:023781548 0 W/23781548-23781548 FN2792-S SNP T -> C AC=1;AN=198;BQB=0.606785;DP=3446;DP4=1174,1702,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000290192;MQB=5.01391e-09;MQSB=0.365891;RPB=0.933014;SGB=-58.4208;VDB=0.00784715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S102P|493|LOC_Os03g42710|protein_coding|CODING|LOC_Os03g42710.1|1|1) FN2192-S.SNP.3:23783393 chr03:023783393 0 W/23783393-23783393 FN2192-S SNP T -> A AC=2;AN=190;BQB=0.392499;DP=5110;DP4=2472,2175,31,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000195695;MQB=1.51522e-30;MQSB=0.989193;RPB=0.83628;SGB=69.3739;VDB=0.0932741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.3:23793242 chr03:023793242 0 W/23793242-23793242 FN2318 SNP T -> C AC=1;AN=192;BQB=0.971716;DP=4982;DP4=2398,2342,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=7.41441e-05;MQSB=4.00348e-16;RPB=0.942056;SGB=44.6462;VDB=0.248694;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.3:23795379 chr03:023795379 0 W/23795379-23795379 FN577-S Single Base Substitution A-T INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3306-S.SNP.3:23796548 chr03:023796548 0 W/23796548-23796548 FN3306-S SNP T -> G AC=2;AN=184;BQB=0.944759;DP=2824;DP4=1367,1361,12,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.71354e-12;MQSB=0.996518;RPB=0.0696704;SGB=63.9222;VDB=0.17126;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.3:23797985 chr03:023797985 0 W/23797985-23797985 FN829-S Single Base Substitution A-T INTRON HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN-275.SNP.3:23825676 chr03:023825676 0 W/23825676-23825676 FN-275 Single Base Substitution A-G INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2410.SNP.3:23831512 chr03:023831512 0 W/23831512-23831512 FN2410 SNP A -> G AC=1;AN=200;BQB=0.764337;DP=3959;DP4=1974,1769,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57996e-15;MQSB=0.359967;RPB=0.992999;SGB=127.947;VDB=0.0254549;EFF=INTRON(MODIFIER||||623|LOC_Os03g42780|protein_coding|CODING|LOC_Os03g42780.1|5|1) FN2660-S.SNP.3:23835002 chr03:023835002 0 W/23835002-23835002 FN2660-S SNP A -> G AC=1;AN=200;BQB=0.992492;DP=4828;DP4=2311,2301,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31188e-10;MQSB=0.925173;RPB=0.394943;SGB=68.0801;VDB=0.210028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.3:23843187 chr03:023843187 0 W/23843187-23843187 FN3783-S SNP G -> T AC=1;AN=190;BQB=0.896783;DP=2571;DP4=1129,1370,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78536e-07;MQSB=0.98121;RPB=0.927725;SGB=28.9929;VDB=0.470799;EFF=INTRON(MODIFIER||||56|LOC_Os03g42799|protein_coding|CODING|LOC_Os03g42799.1|1|1) FN1284-S.SNP.3:23844212 chr03:023844212 0 W/23844212-23844212 FN1284-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2404.SNP.3:23853513 chr03:023853513 0 W/23853513-23853513 FN2404 SNP G -> A AC=1;AN=200;BQB=0.866885;DP=5271;DP4=2610,2286,23,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72634e-23;MQSB=0.940822;RPB=0.941249;SGB=130.399;VDB=0.560616;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.3:23864713 chr03:023864713 0 W/23864713-23864713 FN-384 Single Base Substitution G-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN2739-S.SNP.3:23869812 chr03:023869812 0 W/23869812-23869812 FN2739-S SNP A -> G AC=2;AN=200;BQB=0.954432;DP=5006;DP4=2026,2734,17,36;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0;MQB=7.10006e-08;MQSB=4.47694e-31;RPB=0.931233;SGB=123.271;VDB=0.856251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.3:23872289 chr03:023872289 0 W/23872289-23872289 FN2233-S SNP A -> G AC=1;AN=190;BQB=0.424758;DP=5162;DP4=2390,2341,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193723;MQB=3.2994e-06;MQSB=0.489127;RPB=0.134836;SGB=4.11112;VDB=0.108893;EFF=INTRON(MODIFIER||||477|LOC_Os03g42830|protein_coding|CODING|LOC_Os03g42830.1|2|1) FN2426.SNP.3:23877152 chr03:023877152 0 W/23877152-23877152 FN2426 SNP G -> T AC=1;AN=200;BQB=0.77791;DP=4000;DP4=1713,2043,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10775e-07;MQSB=0.929178;RPB=0.841182;SGB=43.8747;VDB=0.260277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.3:23879800 chr03:023879800 0 W/23879800-23879800 FN2358 SNP C -> T AC=2;AN=192;BQB=0.786372;DP=5092;DP4=2619,2104,22,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.06591e-17;MQSB=0.956722;RPB=0.808045;SGB=-5.17475;VDB=0.377329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.3:23881073 chr03:023881073 0 W/23881073-23881073 FN3935-S SNP C -> G AC=1;AN=158;BQB=0.977898;DP=2477;DP4=1106,1265,13,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.68417e-13;MQSB=0.999584;RPB=0.991775;SGB=95.131;VDB=0.0272985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.3:23885881 chr03:023885881 0 W/23885881-23885881 FN3430-S SNP G -> A AC=1;AN=184;BQB=0.86768;DP=2805;DP4=1401,1311,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=3.39942e-09;MQSB=8.24454e-07;RPB=0.976123;SGB=71.3514;VDB=0.590847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.3:23886664 chr03:023886664 0 W/23886664-23886664 FN1373-S Single Base Substitution G-C INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2579-S.SNP.3:23905192 chr03:023905192 0 W/23905192-23905192 FN2579-S SNP C -> G AC=1;AN=198;BQB=0.899668;DP=3908;DP4=1720,1999,9,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.91115e-15;MQSB=0.704206;RPB=0.877345;SGB=90.4807;VDB=0.635585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.3:23906317 chr03:023906317 0 W/23906317-23906317 FN2355 SNP C -> A AC=1;AN=192;BQB=0.67553;DP=4458;DP4=2178,1984,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.9842e-10;MQSB=0.759874;RPB=0.588516;SGB=-10.2539;VDB=0.722787;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.3:23909876 chr03:023909876 0 W/23909876-23909876 FN577-S Single Base Substitution T-A INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN577-S.SNP.3:23909877 chr03:023909877 0 W/23909877-23909877 FN577-S Single Base Substitution T-A INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN577-S.SNP.3:23909882 chr03:023909882 0 W/23909882-23909882 FN577-S Single Base Substitution C-T INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1690-S.SNP.3:23914236 chr03:023914236 0 W/23914236-23914236 FN1690-S SNP G -> A AC=1;AN=188;BQB=0.0113185;DP=3061;DP4=1347,1689,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.77044e-05;MQSB=0.714222;RPB=0.810328;SGB=-35.5377;VDB=0.892733;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.3:23919645 chr03:023919645 0 W/23919645-23919645 FN536-S Single Base Substitution C-T INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN-115.SNP.3:23921279 chr03:023921279 0 W/23921279-23921279 FN-115 Single Base Substitution A-G INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2618-S.SNP.3:23921290 chr03:023921290 0 W/23921290-23921290 FN2618-S SNP C -> G AC=1;AN=198;BQB=0.667127;DP=4095;DP4=2006,1741,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.13691e-12;MQSB=0.711067;RPB=0.393813;SGB=79.6954;VDB=0.111442;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.3:23921682 chr03:023921682 0 W/23921682-23921682 FN933-S Single Base Substitution A-T INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3526-S.SNP.3:23922966 chr03:023922966 0 W/23922966-23922966 FN3526-S SNP T -> A AC=1;AN=188;BQB=0.988189;DP=2769;DP4=1131,1539,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16943e-06;MQSB=0.949582;RPB=0.313902;SGB=39.8925;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN492-S.SNP.3:23937057 chr03:023937057 0 W/23937057-23937057 FN492-S Single Base Substitution T-C INTERGENIC HOMO SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-125.SNP.3:23938999 chr03:023938999 0 W/23938999-23938999 FN-125 Single Base Substitution C-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2134-S.SNP.3:23941125 chr03:023941125 0 W/23941125-23941125 FN2134-S SNP C -> A AC=1;AN=168;BQB=0.853259;DP=3131;DP4=1222,1809,17,18;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0373683;MQB=0.172966;MQSB=0.471102;RPB=0.669381;SGB=31.3762;VDB=0.172034;EFF=INTRON(MODIFIER||||325|LOC_Os03g42930|protein_coding|CODING|LOC_Os03g42930.1|2|1) FN3837-S.SNP.3:23941410 chr03:023941410 0 W/23941410-23941410 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.761936;DP=4611;DP4=2120,2315,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00607244;MQB=0.00124622;MQSB=2.18718e-23;RPB=0.656672;SGB=121.957;VDB=0.598929;EFF=INTRON(MODIFIER||||325|LOC_Os03g42930|protein_coding|CODING|LOC_Os03g42930.1|2|1) FN2670-S.SNP.3:23945828 chr03:023945828 0 W/23945828-23945828 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.439751;DP=4837;DP4=2312,2281,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15821e-13;MQSB=0.760947;RPB=0.989557;SGB=91.1059;VDB=0.765467;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.3:23953658 chr03:023953658 0 W/23953658-23953658 FN496-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. W463-2-1.SNP.3:23960800 chr03:023960800 0 W/23960800-23960800 W463-2-1 Single Base Substitution C-T INTRON HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1069-S.SNP.3:23965818 chr03:023965818 0 W/23965818-23965818 FN1069-S Single Base Substitution A-G INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2226-S.SNP.3:23966004 chr03:023966004 0 W/23966004-23966004 FN2226-S SNP G -> A AC=1;AN=190;BQB=0.968301;DP=3365;DP4=1818,1280,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.23664e-08;MQSB=8.10892e-19;RPB=0.977332;SGB=76.4186;VDB=0.491433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.3:23974749 chr03:023974749 0 W/23974749-23974749 FN3578-S SNP A -> G AC=2;AN=188;BQB=0.997939;DP=2758;DP4=1256,1420,18,17;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=1.19311e-14;MQSB=0.41622;RPB=0.895144;SGB=153.475;VDB=0.830665;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.3:23974749 chr03:023974749 0 W/23974749-23974749 FN500-S Single Base Substitution A-G INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1317-S.SNP.3:23977748 chr03:023977748 0 W/23977748-23977748 FN1317-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g42990 hypothetical protein SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN3851-S.SNP.3:23981410 chr03:023981410 0 W/23981410-23981410 FN3851-S SNP A -> G AC=1;AN=158;BQB=0.723205;DP=2303;DP4=1138,1069,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.6637e-05;MQSB=0.999872;RPB=0.719597;SGB=23.9652;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.3:23983683 chr03:023983683 0 W/23983683-23983683 FN1720-S SNP G -> A AC=1;AN=188;BQB=0.181348;DP=2629;DP4=1861,733,20,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74219e-06;MQSB=0.94767;RPB=0.643524;SGB=-96.2673;VDB=0.0182046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.3:23989092 chr03:023989092 0 W/23989092-23989092 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.981859;DP=4953;DP4=2503,2224,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.50666e-09;MQSB=0.953584;RPB=0.981983;SGB=63.4749;VDB=0.920962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.3:23989098 chr03:023989098 0 W/23989098-23989098 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.933573;DP=4962;DP4=2472,2212,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.92117e-09;MQSB=0.964343;RPB=0.427808;SGB=43.8747;VDB=0.781198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.3:23990720 chr03:023990720 0 W/23990720-23990720 FN2563-S SNP A -> T AC=2;AN=198;BQB=0.927789;DP=4069;DP4=1803,2046,6,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.12042e-13;MQSB=0.999895;RPB=0.357699;SGB=90.9049;VDB=0.532113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q162L|548|LOC_Os03g43010|protein_coding|CODING|LOC_Os03g43010.1|3|1),SPLICE_SITE_REGION(LOW||||548|LOC_Os03g43010|protein_coding|CODING|LOC_Os03g43010.1|3|1) FN-353.SNP.3:23992584 chr03:023992584 0 W/23992584-23992584 FN-353 Single Base Substitution G-A INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. 703-4.SNP.3:23995809 chr03:023995809 0 W/23995809-23995809 703-4 Single Base Substitution T-A INTRON Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2235-S.SNP.3:23997617 chr03:023997617 0 W/23997617-23997617 FN2235-S SNP C -> T AC=2;AN=190;BQB=0.79266;DP=5072;DP4=2492,2097,27,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.90807e-20;MQSB=0.53947;RPB=0.567533;SGB=132.055;VDB=0.25717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.3:24001616 chr03:024001616 0 W/24001616-24001616 FN3293-S SNP G -> T AC=1;AN=184;BQB=0.838047;DP=2612;DP4=1325,1191,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.27961e-11;MQSB=0.999001;RPB=0.594188;SGB=28.3187;VDB=0.960502;EFF=INTRON(MODIFIER||||126|LOC_Os03g43020|protein_coding|CODING|LOC_Os03g43020.1|2|1) FN3293-S.SNP.3:24001617 chr03:024001617 0 W/24001617-24001617 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.767499;DP=2603;DP4=1324,1196,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22106e-10;MQSB=0.977786;RPB=0.868401;SGB=46.3132;VDB=0.970247;EFF=INTRON(MODIFIER||||126|LOC_Os03g43020|protein_coding|CODING|LOC_Os03g43020.1|2|1) FN3489-S.SNP.3:24005327 chr03:024005327 0 W/24005327-24005327 FN3489-S SNP G -> T AC=1;AN=184;BQB=0.813802;DP=2708;DP4=1273,1352,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68025e-08;MQSB=0.99624;RPB=0.997844;SGB=71.3514;VDB=0.473206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.3:24006530 chr03:024006530 0 W/24006530-24006530 FN3710-S SNP A -> C AC=1;AN=190;BQB=0.841789;DP=2548;DP4=1186,1255,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.03449e-05;MQSB=0.0120292;RPB=0.407669;SGB=44.5415;VDB=0.218041;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.3:24012629 chr03:024012629 0 W/24012629-24012629 FN3760-S SNP C -> T AC=1;AN=190;BQB=0.948707;DP=2738;DP4=1309,1360,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.58635e-06;MQSB=0.993305;RPB=0.893864;SGB=21.8853;VDB=0.0731931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R694C|1090|LOC_Os03g43040|protein_coding|CODING|LOC_Os03g43040.1|2|1) FN2620-S.SNP.3:24015555 chr03:024015555 0 W/24015555-24015555 FN2620-S SNP A -> T AC=1;AN=198;BQB=0.027664;DP=3752;DP4=1980,1481,17,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.17024e-13;MQSB=0.999968;RPB=0.655382;SGB=20.5152;VDB=0.829791;EFF=INTRON(MODIFIER||||241|LOC_Os03g43050|protein_coding|CODING|LOC_Os03g43050.1|2|1) FN762-S.SNP.3:24029040 chr03:024029040 0 W/24029040-24029040 FN762-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g43070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN487-S.SNP.3:24029455 chr03:024029455 0 W/24029455-24029455 FN487-S Single Base Substitution C-A INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN-292.SNP.3:24045730 chr03:024045730 0 W/24045730-24045730 FN-292 Single Base Substitution A-G INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN2202-S.SNP.3:24047506 chr03:024047506 0 W/24047506-24047506 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.998859;DP=5013;DP4=2479,2236,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000162477;MQSB=1.97168e-10;RPB=0.964832;SGB=28.9929;VDB=0.650903;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.3:24047760 chr03:024047760 0 W/24047760-24047760 FN230-S Single Base Substitution A-G INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3783-S.SNP.3:24048109 chr03:024048109 0 W/24048109-24048109 FN3783-S SNP C -> G AC=1;AN=190;BQB=0.602354;DP=2587;DP4=1170,1356,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000496569;MQSB=0.992646;RPB=0.800316;SGB=35.4339;VDB=0.0766499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.3:24068319 chr03:024068319 0 W/24068319-24068319 FN2120-S SNP C -> T AC=2;AN=168;BQB=0.386297;DP=3629;DP4=1856,1719,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.81504e-15;MQSB=0.994324;RPB=0.397356;SGB=-9.7719;VDB=0.57583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.3:24069006 chr03:024069006 0 W/24069006-24069006 FN2410 SNP G -> C AC=1;AN=200;BQB=0.968931;DP=4084;DP4=2019,1712,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80857e-05;MQSB=0.233005;RPB=0.415349;SGB=54.2646;VDB=0.285423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.3:24070224 chr03:024070224 0 W/24070224-24070224 FN3419-S SNP C -> T AC=2;AN=184;BQB=0.989908;DP=2902;DP4=1399,1397,11,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.06419e-14;MQSB=0.74041;RPB=0.635757;SGB=51.0148;VDB=0.231948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.3:24070332 chr03:024070332 0 W/24070332-24070332 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.943591;DP=4830;DP4=2338,2106,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.35859e-08;MQSB=0.839123;RPB=0.690758;SGB=26.2136;VDB=0.450431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.3:24070911 chr03:024070911 0 W/24070911-24070911 FN2595-S SNP T -> A AC=1;AN=198;BQB=0.916697;DP=4183;DP4=2008,1978,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.94729e-13;MQSB=0.998216;RPB=0.964154;SGB=68.91;VDB=0.850791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.3:24075846 chr03:024075846 0 W/24075846-24075846 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.915402;DP=2304;DP4=1180,1018,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000434028;MQB=4.45464e-06;MQSB=1.59555e-09;RPB=0.413001;SGB=62.3078;VDB=0.723986;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.3:24080178 chr03:024080178 0 W/24080178-24080178 FN1506-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os03g43160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3849-S.SNP.3:24083595 chr03:024083595 0 W/24083595-24083595 FN3849-S SNP G -> A AC=2;AN=158;BQB=0.913013;DP=2237;DP4=1057,1044,12,11;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=9.2261e-07;MQSB=0.0267411;RPB=0.788895;SGB=95.131;VDB=0.962777;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.3:24085890 chr03:024085890 0 W/24085890-24085890 FN-228 Single Base Substitution G-A INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN866-S.SNP.3:24091578 chr03:024091578 0 W/24091578-24091578 FN866-S Single Base Substitution C-G INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3381-S.SNP.3:24092739 chr03:024092739 0 W/24092739-24092739 FN3381-S SNP A -> G AC=1;AN=184;BQB=0.837566;DP=2476;DP4=1128,1279,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.03815e-07;MQSB=0.67184;RPB=0.919183;SGB=35.7479;VDB=0.1621;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V133|215|LOC_Os03g43200|protein_coding|CODING|LOC_Os03g43200.1|1|1) FN3951-S.SNP.3:24093361 chr03:024093361 0 W/24093361-24093361 FN3951-S SNP G -> A AC=1;AN=168;BQB=0.819763;DP=2471;DP4=1235,1146,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.94185e-08;MQSB=0.727506;RPB=0.710156;SGB=19.7539;VDB=0.899249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G165R|215|LOC_Os03g43200|protein_coding|CODING|LOC_Os03g43200.1|2|1) FN2476.SNP.3:24096249 chr03:024096249 0 W/24096249-24096249 FN2476 SNP C -> T AC=1;AN=200;BQB=0.559346;DP=4296;DP4=2085,1991,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.35166e-10;MQSB=0.895056;RPB=0.31003;SGB=68.0801;VDB=0.612325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T220I|719|LOC_Os03g43210|protein_coding|CODING|LOC_Os03g43210.1|3|1) FN1436-S.SNP.3:24097495 chr03:024097495 0 W/24097495-24097495 FN1436-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g43210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN4302-S.SNP.3:24098351 chr03:024098351 0 W/24098351-24098351 FN4302-S SNP A -> C AC=1;AN=170;BQB=0.990871;DP=2544;DP4=1209,1190,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.95173e-10;MQSB=0.98342;RPB=0.740884;SGB=45.206;VDB=0.31234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Ccc|T691P|719|LOC_Os03g43210|protein_coding|CODING|LOC_Os03g43210.1|7|1) FN4152-S.SNP.3:24099059 chr03:024099059 0 W/24099059-24099059 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.998262;DP=2555;DP4=1323,1156,12,19;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.74148e-18;MQSB=0.819869;RPB=0.855488;SGB=96.8457;VDB=0.830082;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R1596*|1690|LOC_Os03g43220|protein_coding|CODING|LOC_Os03g43220.1|11|1) FN-387.SNP.3:24100680 chr03:024100680 0 W/24100680-24100680 FN-387 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g43220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2417.SNP.3:24103106 chr03:024103106 0 W/24103106-24103106 FN2417 SNP C -> T AC=1;AN=200;BQB=0.923405;DP=4783;DP4=2184,2378,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.30136e-07;MQSB=0.705205;RPB=0.747332;SGB=36.6644;VDB=0.960145;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K733|1690|LOC_Os03g43220|protein_coding|CODING|LOC_Os03g43220.1|5|1) FN793-S.SNP.3:24109654 chr03:024109654 0 W/24109654-24109654 FN793-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g43230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN985-S.SNP.3:24111152 chr03:024111152 0 W/24111152-24111152 FN985-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1689-S.SNP.3:24114005 chr03:024114005 0 W/24114005-24114005 FN1689-S SNP C -> T AC=1;AN=188;BQB=0.107293;DP=3405;DP4=702,2654,5,33;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0939794;MQB=0.986644;MQSB=3.75127e-26;RPB=0.328065;SGB=-173.199;VDB=0.143712;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.3:24114584 chr03:024114584 0 W/24114584-24114584 FN302-S Single Base Substitution C-T INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-54.SNP.3:24116928 chr03:024116928 0 W/24116928-24116928 FN-54 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN804-S.SNP.3:24117976 chr03:024117976 0 W/24117976-24117976 FN804-S Single Base Substitution G-A INTRON HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3110-S.SNP.3:24120517 chr03:024120517 0 W/24120517-24120517 FN3110-S SNP G -> A AC=1;AN=184;BQB=0.967415;DP=3311;DP4=2012,1123,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0102688;MQB=4.04966e-05;MQSB=0.973651;RPB=0.553753;SGB=62.3078;VDB=0.233892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.3:24122883 chr03:024122883 0 W/24122883-24122883 FN3652-S SNP C -> A AC=2;AN=190;BQB=0.987097;DP=2616;DP4=1227,1279,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.4637e-16;MQSB=0.998894;RPB=0.326946;SGB=121.957;VDB=0.431735;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G894W|1142|LOC_Os03g43270|protein_coding|CODING|LOC_Os03g43270.1|4|1) FN-123.SNP.3:24124042 chr03:024124042 0 W/24124042-24124042 FN-123 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN-237.SNP.3:24125902 chr03:024125902 0 W/24125902-24125902 FN-237 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-249.SNP.3:24130349 chr03:024130349 0 W/24130349-24130349 FN-249 Single Base Substitution T-C INTRON HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN3951-S.SNP.3:24130542 chr03:024130542 0 W/24130542-24130542 FN3951-S SNP T -> A AC=1;AN=168;BQB=0.778343;DP=2504;DP4=1445,990,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0447284;MQB=0.988336;MQSB=0.93009;RPB=0.956012;SGB=27.8864;VDB=0.753144;EFF=INTRON(MODIFIER||||908|LOC_Os03g43280|protein_coding|CODING|LOC_Os03g43280.1|6|1) FN3807-S.SNP.3:24133542 chr03:024133542 0 W/24133542-24133542 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.994272;DP=2612;DP4=1194,1353,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00842266;MQB=3.65255e-05;MQSB=0.161915;RPB=0.690411;SGB=44.5415;VDB=0.737713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A41T|908|LOC_Os03g43280|protein_coding|CODING|LOC_Os03g43280.1|1|1) FN1032-S.SNP.3:24136249 chr03:024136249 0 W/24136249-24136249 FN1032-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g43290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1028-S.SNP.3:24141490 chr03:024141490 0 W/24141490-24141490 FN1028-S Single Base Substitution G-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2461.SNP.3:24144638 chr03:024144638 0 W/24144638-24144638 FN2461 SNP A -> G AC=1;AN=200;BQB=0.264391;DP=4959;DP4=2151,2549,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.41388e-06;MQSB=0.999968;RPB=0.787468;SGB=33.0593;VDB=0.0538264;EFF=INTRON(MODIFIER||||194|LOC_Os03g43309|protein_coding|CODING|LOC_Os03g43309.1|3|1) FN1541-S.SNP.3:24160224 chr03:024160224 0 W/24160224-24160224 FN1541-S Single Base Substitution C-T INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN-265.SNP.3:24164033 chr03:024164033 0 W/24164033-24164033 FN-265 Single Base Substitution C-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN-349.SNP.3:24164803 chr03:024164803 0 W/24164803-24164803 FN-349 Single Base Substitution A-G INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2116-S.SNP.3:24164899 chr03:024164899 0 W/24164899-24164899 FN2116-S SNP A -> T AC=1;AN=168;BQB=0.891461;DP=3549;DP4=1729,1784,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0349e-10;MQSB=0.546434;RPB=0.232245;SGB=8.48315;VDB=0.896173;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.3:24165052 chr03:024165052 0 W/24165052-24165052 FN1284-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2711-S.SNP.3:24169957 chr03:024169957 0 W/24169957-24169957 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.727232;DP=4654;DP4=2412,2042,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.1586e-16;MQSB=0.949733;RPB=0.997369;SGB=109.527;VDB=0.172003;EFF=INTRON(MODIFIER||||309|LOC_Os03g43350|protein_coding|CODING|LOC_Os03g43350.1|1|1) FN3439-S.SNP.3:24171839 chr03:024171839 0 W/24171839-24171839 FN3439-S SNP G -> A AC=1;AN=184;BQB=0.330313;DP=3491;DP4=1456,1919,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00763886;MQSB=0.318804;RPB=0.443721;SGB=-16.2794;VDB=0.0261866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.3:24175212 chr03:024175212 0 W/24175212-24175212 FN1122-S Single Base Substitution G-C INTRON HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN-101.SNP.3:24182061 chr03:024182061 0 W/24182061-24182061 FN-101 Single Base Substitution G-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2201-S.SNP.3:24190876 chr03:024190876 0 W/24190876-24190876 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.996985;DP=4905;DP4=2422,2183,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203874;MQB=7.33873e-09;MQSB=0.750693;RPB=0.829146;SGB=67.3108;VDB=0.718985;EFF=INTRON(MODIFIER||||600|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.1|1|1),INTRON(MODIFIER||||597|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.2|1|1),INTRON(MODIFIER||||556|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.3|1|1),INTRON(MODIFIER||||555|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.4|1|1) FN2486.SNP.3:24190959 chr03:024190959 0 W/24190959-24190959 FN2486 SNP C -> T AC=1;AN=200;BQB=0.991269;DP=4832;DP4=2313,2265,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50877e-11;MQSB=0.997421;RPB=0.610238;SGB=37.3004;VDB=0.0633019;EFF=INTRON(MODIFIER||||600|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.1|1|1),INTRON(MODIFIER||||597|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.2|1|1),INTRON(MODIFIER||||556|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.3|1|1),INTRON(MODIFIER||||555|LOC_Os03g43390|protein_coding|CODING|LOC_Os03g43390.4|1|1) FN2658-S.SNP.3:24207935 chr03:024207935 0 W/24207935-24207935 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.605758;DP=4860;DP4=2237,2245,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0249e-11;MQSB=0.998171;RPB=0.180684;SGB=58.2954;VDB=0.139324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.3:24210432 chr03:024210432 0 W/24210432-24210432 FN3679-S SNP T -> C AC=2;AN=190;BQB=0.9966;DP=3157;DP4=1442,1554,20,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.18784e-25;MQSB=0.932282;RPB=0.953188;SGB=190.265;VDB=0.752638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.3:24212446 chr03:024212446 0 W/24212446-24212446 FN3714-S SNP G -> A AC=2;AN=190;BQB=0.987569;DP=2135;DP4=567,1450,10,23;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000468384;MQB=3.19855e-13;MQSB=3.33929e-14;RPB=0.32182;SGB=139.459;VDB=0.797621;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.3:24225666 chr03:024225666 0 W/24225666-24225666 FN1018-S Single Base Substitution G-A INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1018-S.SNP.3:24227050 chr03:024227050 0 W/24227050-24227050 FN1018-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43440 CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1018-S.SNP.3:24227052 chr03:024227052 0 W/24227052-24227052 FN1018-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43440 CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1617-S.SNP.3:24230687 chr03:024230687 0 W/24230687-24230687 FN1617-S Single Base Substitution G-T INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1116-S.SNP.3:24236700 chr03:024236700 0 W/24236700-24236700 FN1116-S Single Base Substitution C-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3462-S.SNP.3:24241275 chr03:024241275 0 W/24241275-24241275 FN3462-S SNP A -> G AC=2;AN=184;BQB=0.975893;DP=2810;DP4=1283,1422,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.90164e-16;MQSB=0.816218;RPB=0.965797;SGB=116.569;VDB=0.500056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.3:24242482 chr03:024242482 0 W/24242482-24242482 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.0366017;DP=3739;DP4=1887,1812,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40198e-11;MQSB=0.994562;RPB=0.961913;SGB=-45.1967;VDB=0.403533;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.3:24246342 chr03:024246342 0 W/24246342-24246342 FN4325-S SNP C -> T AC=1;AN=170;BQB=1;DP=2466;DP4=1179,1127,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52695e-06;MQSB=0.841982;RPB=0.835919;SGB=-1.43813;VDB=0.13933;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.3:24258986 chr03:024258986 0 W/24258986-24258986 FN-218 Single Base Substitution A-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3848-S.SNP.3:24262137 chr03:024262137 0 W/24262137-24262137 FN3848-S SNP G -> C AC=1;AN=158;BQB=0.997558;DP=2141;DP4=1128,912,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.40402e-07;MQSB=0.733016;RPB=0.872559;SGB=34.0735;VDB=0.0960375;EFF=INTRON(MODIFIER||||185|LOC_Os03g43490|protein_coding|CODING|LOC_Os03g43490.1|1|1) FN3811-S.SNP.3:24263129 chr03:024263129 0 W/24263129-24263129 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.999989;DP=3039;DP4=1536,1368,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.23618e-08;MQSB=0.747357;RPB=0.349215;SGB=53.6492;VDB=0.807393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.3:24271710 chr03:024271710 0 W/24271710-24271710 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.660481;DP=3244;DP4=1869,1208,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19078e-07;MQSB=0.87773;RPB=0.43151;SGB=30.8405;VDB=0.563979;EFF=UTR_3_PRIME(MODIFIER||326||474|LOC_Os03g43510|protein_coding|CODING|LOC_Os03g43510.1|7|1),UTR_3_PRIME(MODIFIER||874||378|LOC_Os03g43510|protein_coding|CODING|LOC_Os03g43510.2|6|1) W427-1-1.SNP.3:24276077 chr03:024276077 0 W/24276077-24276077 W427-1-1 Single Base Substitution T-G INTRON HOMO SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3872-S.SNP.3:24276363 chr03:024276363 0 W/24276363-24276363 FN3872-S SNP C -> A AC=1;AN=158;BQB=0.97271;DP=2258;DP4=1310,893,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.41366e-05;MQSB=0.413636;RPB=0.948863;SGB=17.2267;VDB=0.689769;EFF=INTRON(MODIFIER||||474|LOC_Os03g43510|protein_coding|CODING|LOC_Os03g43510.1|2|1),INTRON(MODIFIER||||378|LOC_Os03g43510|protein_coding|CODING|LOC_Os03g43510.2|2|1) FN2352.SNP.3:24278712 chr03:024278712 0 W/24278712-24278712 FN2352 SNP T -> A AC=1;AN=192;BQB=0.836135;DP=4877;DP4=2488,2112,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.42245e-09;MQSB=0.991509;RPB=0.982359;SGB=28.9139;VDB=0.267314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.3:24282045 chr03:024282045 0 W/24282045-24282045 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.889174;DP=4068;DP4=2059,1791,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.85465e-09;MQSB=0.9178;RPB=0.700083;SGB=58.7391;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.3:24289337 chr03:024289337 0 W/24289337-24289337 FN2784-S SNP C -> T AC=2;AN=198;BQB=0.498916;DP=4529;DP4=1963,2309,28,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.10575e-29;MQSB=0.981;RPB=0.932468;SGB=180.359;VDB=0.083479;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.3:24292049 chr03:024292049 0 W/24292049-24292049 FN729-S Single Base Substitution A-T INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN4172-S.SNP.3:24292260 chr03:024292260 0 W/24292260-24292260 FN4172-S SNP G -> A AC=1;AN=170;BQB=0.996249;DP=2219;DP4=860,1292,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.05205e-10;MQSB=0.912289;RPB=0.835243;SGB=74.528;VDB=0.285863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.3:24294946 chr03:024294946 0 W/24294946-24294946 FN1140-S Single Base Substitution G-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2686-S.SNP.3:24300047 chr03:024300047 0 W/24300047-24300047 FN2686-S SNP C -> A AC=1;AN=200;BQB=0.0202195;DP=4721;DP4=2491,1639,5,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64758e-15;MQSB=0.153555;RPB=0.938237;SGB=-421.05;VDB=0.441535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.3:24300436 chr03:024300436 0 W/24300436-24300436 FN1229-S Single Base Substitution C-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN4258-S.SNP.3:24301907 chr03:024301907 0 W/24301907-24301907 FN4258-S SNP G -> A AC=2;AN=170;BQB=0.723918;DP=2288;DP4=1015,1208,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.62238e-10;MQSB=0.9849;RPB=0.909147;SGB=39.4251;VDB=0.771108;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.3:24302678 chr03:024302678 0 W/24302678-24302678 FN_786-4-1 Single Base Substitution C-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN997-S.SNP.3:24304491 chr03:024304491 0 W/24304491-24304491 FN997-S Single Base Substitution C-G INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN1270-S.SNP.3:24315106 chr03:024315106 0 W/24315106-24315106 FN1270-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN-191.SNP.3:24320024 chr03:024320024 0 W/24320024-24320024 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN2491.SNP.3:24322335 chr03:024322335 0 W/24322335-24322335 FN2491 SNP G -> A AC=1;AN=200;BQB=0.190156;DP=4332;DP4=2078,1923,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03961e-10;MQSB=0.853375;RPB=0.764656;SGB=42.5108;VDB=0.340764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.3:24323657 chr03:024323657 0 W/24323657-24323657 FN1596-S Single Base Substitution G-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN-153.SNP.3:24324897 chr03:024324897 0 W/24324897-24324897 FN-153 Single Base Substitution G-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3311-S.SNP.3:24329132 chr03:024329132 0 W/24329132-24329132 FN3311-S SNP C -> T AC=2;AN=184;BQB=0.763095;DP=2653;DP4=1246,1295,18,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.85974e-21;MQSB=0.99913;RPB=0.392428;SGB=166.309;VDB=0.621226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.3:24329132 chr03:024329132 0 W/24329132-24329132 FN3311-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN-370.SNP.3:24338608 chr03:024338608 0 W/24338608-24338608 FN-370 Single Base Substitution G-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1195-S.SNP.3:24340384 chr03:024340384 0 W/24340384-24340384 FN1195-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2234-S.SNP.3:24353064 chr03:024353064 0 W/24353064-24353064 FN2234-S SNP T -> G AC=1;AN=190;BQB=0.518347;DP=4760;DP4=2380,2067,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21372e-06;MQSB=0.893887;RPB=0.519421;SGB=4.11112;VDB=0.32241;EFF=INTRON(MODIFIER||||599|LOC_Os03g43590|protein_coding|CODING|LOC_Os03g43590.1|14|1) FN-298.SNP.3:24361482 chr03:024361482 0 W/24361482-24361482 FN-298 Single Base Substitution A-T INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1034-S.SNP.3:24361482 chr03:024361482 0 W/24361482-24361482 FN1034-S Single Base Substitution A-T INTERGENIC HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN903-S.SNP.3:24361482 chr03:024361482 0 W/24361482-24361482 FN903-S Single Base Substitution A-T INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1394-S.SNP.3:24362890 chr03:024362890 0 W/24362890-24362890 FN1394-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN-162.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN-162 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-79.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN-79 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1080-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN1080-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1228-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN1228-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2177-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN2177-S SNP C -> T AC=1;AN=168;BQB=0.00344344;DP=3461;DP4=1718,1688,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0158914;MQB=0.0029441;MQSB=1.01263e-08;RPB=0.99127;SGB=-159.481;VDB=0.300972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A179T|1177|LOC_Os03g43610|protein_coding|CODING|LOC_Os03g43610.1|2|1) FN3567-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.994224;DP=2993;DP4=1497,1429,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.0026729;MQB=5.63101e-09;MQSB=0.259045;RPB=0.746458;SGB=71.6954;VDB=0.673073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A179T|1177|LOC_Os03g43610|protein_coding|CODING|LOC_Os03g43610.1|2|1) FN3725-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.982078;DP=2984;DP4=1524,1356,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00301609;MQB=1.17147e-05;MQSB=0.372454;RPB=0.589113;SGB=28.9929;VDB=0.763155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A179T|1177|LOC_Os03g43610|protein_coding|CODING|LOC_Os03g43610.1|2|1) FN3871-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN3871-S SNP C -> T AC=1;AN=158;BQB=0.968892;DP=2542;DP4=1292,1183,6,1;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00236035;MQB=0.0001725;MQSB=0.45335;RPB=0.932473;SGB=25.2211;VDB=0.965927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A179T|1177|LOC_Os03g43610|protein_coding|CODING|LOC_Os03g43610.1|2|1) FN507-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN507-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN835-S.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN835-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN_846-8-1.SNP.3:24374368 chr03:024374368 0 W/24374368-24374368 FN_846-8-1 Single Base Substitution C-T Homo LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN4116-S.SNP.3:24381431 chr03:024381431 0 W/24381431-24381431 FN4116-S SNP T -> A AC=2;AN=182;BQB=0.803088;DP=2697;DP4=1304,1235,20,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.5296e-18;MQSB=0.937419;RPB=0.511706;SGB=-44.1765;VDB=0.921295;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.3:24392781 chr03:024392781 0 W/24392781-24392781 FN4305-S SNP C -> G AC=2;AN=170;BQB=0.800048;DP=2653;DP4=1519,989,17,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.39311e-12;MQSB=0.904356;RPB=0.619814;SGB=76.1898;VDB=0.763848;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.3:24401311 chr03:024401311 0 W/24401311-24401311 W463-2-1 Single Base Substitution C-G UTR_3_PRIME HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN4051-S.SNP.3:24402440 chr03:024402440 0 W/24402440-24402440 FN4051-S SNP G -> T AC=1;AN=168;BQB=0.875208;DP=3102;DP4=1428,1569,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.6977e-06;MQSB=0.982756;RPB=0.996943;SGB=27.8864;VDB=0.887548;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G120|394|LOC_Os03g43650|protein_coding|CODING|LOC_Os03g43650.1|1|1) FN2463.SNP.3:24413863 chr03:024413863 0 W/24413863-24413863 FN2463 SNP A -> G AC=2;AN=200;BQB=0.686563;DP=5136;DP4=2559,2308,13,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.9455e-23;MQSB=0.989073;RPB=0.66071;SGB=164.789;VDB=0.591322;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.3:24421306 chr03:024421306 0 W/24421306-24421306 FN620-S Single Base Substitution T-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2279-S.SNP.3:24425352 chr03:024425352 0 W/24425352-24425352 FN2279-S SNP A -> T AC=1;AN=190;BQB=0.998949;DP=4363;DP4=2340,1810,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76707e-09;MQSB=0.977464;RPB=0.819021;SGB=28.7675;VDB=0.832486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1435-S.SNP.3:24432273 chr03:024432273 0 W/24432273-24432273 FN1435-S Single Base Substitution T-C INTRON HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2348.SNP.3:24437206 chr03:024437206 0 W/24437206-24437206 FN2348 SNP A -> G AC=2;AN=192;BQB=0.653221;DP=4981;DP4=2049,2297,11,15;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0;MQB=3.75711e-13;MQSB=0.108119;RPB=0.984357;SGB=82.5522;VDB=0.490627;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.3:24443110 chr03:024443110 0 W/24443110-24443110 FN963-S Single Base Substitution C-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2731-S.SNP.3:24445791 chr03:024445791 0 W/24445791-24445791 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.741829;DP=5201;DP4=2409,2499,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43441e-13;MQSB=0.962115;RPB=0.868565;SGB=39.9056;VDB=0.547388;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.3:24446964 chr03:024446964 0 W/24446964-24446964 FN4161-S SNP T -> C AC=2;AN=170;BQB=0.986146;DP=2428;DP4=1019,1326,12,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.86832e-13;MQSB=0.934045;RPB=0.83188;SGB=105.627;VDB=0.869002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.3:24447501 chr03:024447501 0 W/24447501-24447501 FN1048-S Single Base Substitution C-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3543-S.SNP.3:24452353 chr03:024452353 0 W/24452353-24452353 FN3543-S SNP A -> T AC=1;AN=188;BQB=0.979289;DP=2855;DP4=1343,1420,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.54289e-10;MQSB=0.998181;RPB=0.764229;SGB=71.6954;VDB=0.909751;EFF=STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|480|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.1|5|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|480|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.2|5|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|480|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.3|4|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|480|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.4|5|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R274*|469|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.5|5|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|417|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.6|5|1),STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R285*|347|LOC_Os03g43720|protein_coding|CODING|LOC_Os03g43720.7|5|1);LOF=(LOC_Os03g43720|LOC_Os03g43720|7|0.86);NMD=(LOC_Os03g43720|LOC_Os03g43720|7|0.86) FN3668-S.SNP.3:24454245 chr03:024454245 0 W/24454245-24454245 FN3668-S SNP T -> C AC=2;AN=190;BQB=0.960711;DP=1503;DP4=316,1141,0,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.71173e-05;MQSB=0.0716561;RPB=0.87294;SGB=39.9877;VDB=0.560195;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.3:24462067 chr03:024462067 0 W/24462067-24462067 FN-397 Single Base Substitution C-T INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4272-S.SNP.3:24462067 chr03:024462067 0 W/24462067-24462067 FN4272-S SNP C -> T AC=2;AN=170;BQB=0.839144;DP=2391;DP4=1231,1054,22,28;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.18484e-30;MQSB=0.844745;RPB=0.188817;SGB=181.85;VDB=0.594744;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.3:24462067 chr03:024462067 0 W/24462067-24462067 FN_N1-119-1 Single Base Substitution C-T Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN466-S.SNP.3:24462795 chr03:024462795 0 W/24462795-24462795 FN466-S Single Base Substitution G-T INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN3933-S.SNP.3:24464646 chr03:024464646 0 W/24464646-24464646 FN3933-S SNP G -> A AC=2;AN=158;BQB=0.993039;DP=2532;DP4=1321,1042,14,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.68646e-09;MQSB=0.160403;RPB=0.814588;SGB=90.7616;VDB=0.335124;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.3:24467278 chr03:024467278 0 W/24467278-24467278 FN1731-S SNP C -> A AC=2;AN=188;BQB=0.812538;DP=2665;DP4=1214,1411,17,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.45581e-13;MQSB=0.712042;RPB=0.788909;SGB=-43.3017;VDB=0.0238765;EFF=INTRON(MODIFIER||||148|LOC_Os03g43750|protein_coding|CODING|LOC_Os03g43750.1|1|1) FN502-S.SNP.3:24471638 chr03:024471638 0 W/24471638-24471638 FN502-S Single Base Substitution A-C UTR_5_PRIME HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN662-S.SNP.3:24475507 chr03:024475507 0 W/24475507-24475507 FN662-S Single Base Substitution G-A INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN550-S.SNP.3:24484774 chr03:024484774 0 W/24484774-24484774 FN550-S Single Base Substitution T-C INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN2347.SNP.3:24487776 chr03:024487776 0 W/24487776-24487776 FN2347 SNP G -> A AC=1;AN=192;BQB=0.150009;DP=4694;DP4=2518,1900,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.71398e-06;MQSB=0.999764;RPB=0.902796;SGB=-35.3278;VDB=0.836076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.3:24489140 chr03:024489140 0 W/24489140-24489140 FN2204-S SNP G -> C AC=1;AN=190;BQB=0.979705;DP=3383;DP4=1511,1666,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.70669e-12;MQSB=0.797942;RPB=0.758892;SGB=82.301;VDB=0.377255;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H24D|294|LOC_Os03g43770|protein_coding|CODING|LOC_Os03g43770.1|1|1) FN-327.SNP.3:24508203 chr03:024508203 0 W/24508203-24508203 FN-327 Single Base Substitution T-A INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1540-S.SNP.3:24508700 chr03:024508700 0 W/24508700-24508700 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2790-S.SNP.3:24511142 chr03:024511142 0 W/24511142-24511142 FN2790-S SNP T -> A AC=1;AN=198;BQB=0.880763;DP=4127;DP4=2027,1886,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.35517e-12;MQSB=0.990705;RPB=0.531987;SGB=34.5346;VDB=0.348454;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.3:24512691 chr03:024512691 0 W/24512691-24512691 FN1085-S Single Base Substitution G-A INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1288-S.SNP.3:24518032 chr03:024518032 0 W/24518032-24518032 FN1288-S Single Base Substitution A-T INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3090-S.SNP.3:24521464 chr03:024521464 0 W/24521464-24521464 FN3090-S SNP A -> G AC=1;AN=184;BQB=0.981551;DP=2514;DP4=1269,1191,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0273e-09;MQSB=0.92958;RPB=0.796278;SGB=42.7914;VDB=0.25488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D163G|1255|LOC_Os03g43800|protein_coding|CODING|LOC_Os03g43800.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D163G|1246|LOC_Os03g43800|protein_coding|CODING|LOC_Os03g43800.2|6|1) FN3474-S.SNP.3:24530167 chr03:024530167 0 W/24530167-24530167 FN3474-S SNP T -> A AC=2;AN=184;BQB=0.896019;DP=2671;DP4=1330,1238,11,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.32876e-19;MQSB=0.98787;RPB=0.735658;SGB=-5.32182;VDB=0.733921;EFF=INTRON(MODIFIER||||1255|LOC_Os03g43800|protein_coding|CODING|LOC_Os03g43800.1|17|1),INTRON(MODIFIER||||1246|LOC_Os03g43800|protein_coding|CODING|LOC_Os03g43800.2|17|1) FN3910-S.SNP.3:24537750 chr03:024537750 0 W/24537750-24537750 FN3910-S SNP C -> T AC=2;AN=158;BQB=0.635138;DP=2137;DP4=965,1087,4,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.04251e-06;MQSB=0.983762;RPB=0.780645;SGB=55.806;VDB=0.255247;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.3:24538674 chr03:024538674 0 W/24538674-24538674 FN4235-S SNP A -> T AC=2;AN=170;BQB=0.950995;DP=1858;DP4=915,886,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.35694e-13;MQSB=0.956477;RPB=0.764822;SGB=72.7472;VDB=0.442651;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.3:24544751 chr03:024544751 0 W/24544751-24544751 FN443-S Single Base Substitution T-C INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3776-S.SNP.3:24545608 chr03:024545608 0 W/24545608-24545608 FN3776-S SNP G -> A AC=1;AN=190;BQB=0.79174;DP=2552;DP4=953,1361,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18302e-07;MQSB=0.74183;RPB=0.982698;SGB=44.5415;VDB=0.262875;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E130|494|LOC_Os03g43810|protein_coding|CODING|LOC_Os03g43810.1|2|1) FN3776-S.SNP.3:24545609 chr03:024545609 0 W/24545609-24545609 FN3776-S SNP G -> A AC=1;AN=190;BQB=0.832748;DP=2535;DP4=995,1352,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16083e-07;MQSB=0.720158;RPB=0.779163;SGB=44.5415;VDB=0.150242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A131T|494|LOC_Os03g43810|protein_coding|CODING|LOC_Os03g43810.1|2|1) FN1565-S.SNP.3:24547225 chr03:024547225 0 W/24547225-24547225 FN1565-S Single Base Substitution C-T INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2103-S.SNP.3:24558884 chr03:024558884 0 W/24558884-24558884 FN2103-S SNP C -> T AC=2;AN=168;BQB=0.436619;DP=3698;DP4=1759,1866,14,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.22377e-17;MQSB=0.990228;RPB=0.779338;SGB=-93.1751;VDB=0.728636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.3:24563378 chr03:024563378 0 W/24563378-24563378 FN1448-S Single Base Substitution C-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. W138-2-1.SNP.3:24567364 chr03:024567364 0 W/24567364-24567364 W138-2-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2531-S.SNP.3:24571688 chr03:024571688 0 W/24571688-24571688 FN2531-S SNP C -> T AC=2;AN=198;BQB=0.831929;DP=4570;DP4=2072,2167,21,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.69413e-26;MQSB=0.946333;RPB=0.840788;SGB=55.6079;VDB=0.795187;EFF=INTERGENIC(MODIFIER||||||||||1) FN1275-S.SNP.3:24572185 chr03:024572185 0 W/24572185-24572185 FN1275-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN568-S.SNP.3:24572840 chr03:024572840 0 W/24572840-24572840 FN568-S Single Base Substitution T-A INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN452-S.SNP.3:24583984 chr03:024583984 0 W/24583984-24583984 FN452-S Single Base Substitution C-A INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN452-S.SNP.3:24583985 chr03:024583985 0 W/24583985-24583985 FN452-S Single Base Substitution C-T INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN3294-S.SNP.3:24587646 chr03:024587646 0 W/24587646-24587646 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.908128;DP=2376;DP4=1114,1178,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.11418e-11;MQSB=0.960811;RPB=0.365487;SGB=63.9222;VDB=0.712545;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.3:24588092 chr03:024588092 0 W/24588092-24588092 FN_815-4-1 Single Base Substitution G-A HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN4032-S.SNP.3:24595138 chr03:024595138 0 W/24595138-24595138 FN4032-S SNP C -> A AC=1;AN=168;BQB=0.0438812;DP=2561;DP4=923,1366,22,15;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.000780945;MQB=0.992981;MQSB=7.48799e-20;RPB=0.227958;SGB=-421.435;VDB=0.199487;EFF=INTRON(MODIFIER||||418|LOC_Os03g43850|protein_coding|CODING|LOC_Os03g43850.1|11|1) FN3343-S.SNP.3:24601704 chr03:024601704 0 W/24601704-24601704 FN3343-S SNP G -> T AC=1;AN=184;BQB=0.917156;DP=3053;DP4=1547,1403,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=6.82117e-05;MQSB=0.982759;RPB=0.906217;SGB=44.2207;VDB=0.860218;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.3:24602812 chr03:024602812 0 W/24602812-24602812 FN748-S Single Base Substitution C-T INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2580-S.SNP.3:24608792 chr03:024608792 0 W/24608792-24608792 FN2580-S SNP C -> T AC=1;AN=198;BQB=0.60555;DP=3756;DP4=1662,1888,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.05449e-12;MQSB=0.664749;RPB=0.207335;SGB=61.7198;VDB=0.343508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.3:24619645 chr03:024619645 0 W/24619645-24619645 FN2646-S SNP T -> C AC=1;AN=200;BQB=0.857999;DP=4826;DP4=2307,2271,22,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75893e-14;MQSB=0.852103;RPB=0.581266;SGB=58.1418;VDB=0.779631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.3:24619940 chr03:024619940 0 W/24619940-24619940 FN3772-S SNP T -> C AC=1;AN=190;BQB=0.993417;DP=2742;DP4=1264,1370,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80532e-07;MQSB=0.994927;RPB=0.556038;SGB=28.9929;VDB=0.14653;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.3:24632652 chr03:024632652 0 W/24632652-24632652 FN-35 Single Base Substitution G-T INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1270-S.SNP.3:24635692 chr03:024635692 0 W/24635692-24635692 FN1270-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN239-S.SNP.3:24637859 chr03:024637859 0 W/24637859-24637859 FN239-S Single Base Substitution A-T INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2361.SNP.3:24647985 chr03:024647985 0 W/24647985-24647985 FN2361 SNP C -> G AC=2;AN=192;BQB=0.715369;DP=4533;DP4=2341,1859,33,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.39908e-27;MQSB=0.983208;RPB=0.998308;SGB=175.225;VDB=0.309182;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.3:24647991 chr03:024647991 0 W/24647991-24647991 FN2361 SNP C -> T AC=2;AN=192;BQB=0.00793775;DP=4582;DP4=2373,1897,33,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.21534e-28;MQSB=0.900124;RPB=0.730165;SGB=110.973;VDB=0.522428;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.3:24652225 chr03:024652225 0 W/24652225-24652225 FN1115-S Single Base Substitution T-A INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1115-S.SNP.3:24652226 chr03:024652226 0 W/24652226-24652226 FN1115-S Single Base Substitution A-T INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3663-S.SNP.3:24653671 chr03:024653671 0 W/24653671-24653671 FN3663-S SNP C -> A AC=1;AN=190;BQB=0.802135;DP=2590;DP4=1320,1184,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30663e-06;MQSB=0.943913;RPB=0.682587;SGB=36.1006;VDB=0.515483;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L523|862|LOC_Os03g43930|protein_coding|CODING|LOC_Os03g43930.1|12|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L523|859|LOC_Os03g43930|protein_coding|CODING|LOC_Os03g43930.2|12|1) FN3885-S.SNP.3:24666764 chr03:024666764 0 W/24666764-24666764 FN3885-S SNP G -> A AC=1;AN=158;BQB=0.903852;DP=2424;DP4=1130,1162,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.10457e-06;MQSB=0.990322;RPB=0.891611;SGB=47.0672;VDB=0.645013;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.3:24667470 chr03:024667470 0 W/24667470-24667470 FN1631-S Single Base Substitution C-T INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1270-S.SNP.3:24669647 chr03:024669647 0 W/24669647-24669647 FN1270-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2788-S.SNP.3:24670765 chr03:024670765 0 W/24670765-24670765 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.485263;DP=3636;DP4=1932,1498,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.28296e-14;MQSB=0.986064;RPB=0.87036;SGB=47.5102;VDB=0.975446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.3:24671974 chr03:024671974 0 W/24671974-24671974 FN2532-S SNP G -> T AC=1;AN=198;BQB=0.955622;DP=4095;DP4=1956,1873,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.0002442;MQB=2.201e-10;MQSB=0.725173;RPB=0.745022;SGB=9.3494;VDB=0.387311;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:24674070 chr03:024674070 0 W/24674070-24674070 FN505-S Single Base Substitution A-T INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN-231.SNP.3:24675741 chr03:024675741 0 W/24675741-24675741 FN-231 Single Base Substitution T-A INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN3750-S.SNP.3:24680910 chr03:024680910 0 W/24680910-24680910 FN3750-S SNP G -> A AC=2;AN=190;BQB=0.80824;DP=1642;DP4=1361,178,23,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81596e-13;MQSB=0.854892;RPB=0.383626;SGB=77.3975;VDB=0.803969;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.3:24688379 chr03:024688379 0 W/24688379-24688379 FN-246 Single Base Substitution G-C INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2234-S.SNP.3:24690127 chr03:024690127 0 W/24690127-24690127 FN2234-S SNP G -> A AC=1;AN=190;BQB=0.815453;DP=4599;DP4=2021,2273,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.896e-08;MQSB=0.914648;RPB=0.998657;SGB=7.21887;VDB=0.00859755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.3:24693429 chr03:024693429 0 W/24693429-24693429 FN3580-S SNP C -> A AC=2;AN=188;BQB=0.984003;DP=3137;DP4=1761,1273,24,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.34823e-21;MQSB=0.985852;RPB=0.099183;SGB=131.653;VDB=0.35966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A401S|442|LOC_Os03g43970|protein_coding|CODING|LOC_Os03g43970.1|1|1) FN-184.SNP.3:24694266 chr03:024694266 0 W/24694266-24694266 FN-184 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g43970 amino acid permease family protein, putative, expressed SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2628-S.SNP.3:24696199 chr03:024696199 0 W/24696199-24696199 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.54434;DP=4212;DP4=2291,1620,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26553e-11;MQSB=0.711423;RPB=0.996868;SGB=86.5007;VDB=0.155969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.3:24702744 chr03:024702744 0 W/24702744-24702744 FN2631-S SNP C -> A AC=2;AN=200;BQB=0.988904;DP=4623;DP4=2192,2194,19,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47519e-19;MQSB=0.987656;RPB=0.875305;SGB=81.5883;VDB=0.886949;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L269|624|LOC_Os03g43990|protein_coding|CODING|LOC_Os03g43990.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L260|615|LOC_Os03g43990|protein_coding|CODING|LOC_Os03g43990.2|2|1) FN3676-S.SNP.3:24707849 chr03:024707849 0 W/24707849-24707849 FN3676-S SNP G -> T AC=2;AN=190;BQB=0.9989;DP=2793;DP4=1313,1361,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.1142e-15;MQSB=0.967907;RPB=0.999537;SGB=108.296;VDB=0.0402466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.3:24708985 chr03:024708985 0 W/24708985-24708985 FN2376 SNP G -> A AC=1;AN=192;BQB=0.103815;DP=5248;DP4=2581,2362,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000190549;MQB=3.44519e-10;MQSB=0.970901;RPB=0.538049;SGB=-64.5008;VDB=0.490153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.3:24714852 chr03:024714852 0 W/24714852-24714852 FN1549-S Single Base Substitution A-C INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3495-S.SNP.3:24716638 chr03:024716638 0 W/24716638-24716638 FN3495-S SNP G -> T AC=2;AN=188;BQB=0.999325;DP=3034;DP4=1222,1625,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.33487e-14;MQSB=0.900956;RPB=0.420601;SGB=126.215;VDB=0.200689;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.3:24725631 chr03:024725631 0 W/24725631-24725631 FN1045-S Single Base Substitution C-T INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN805-S.SNP.3:24726259 chr03:024726259 0 W/24726259-24726259 FN805-S Single Base Substitution G-A INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2593-S.SNP.3:24733023 chr03:024733023 0 W/24733023-24733023 FN2593-S SNP G -> C AC=1;AN=198;BQB=0.73182;DP=3706;DP4=1707,1770,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8068e-16;MQSB=0.977152;RPB=0.999033;SGB=22.1104;VDB=0.607857;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.3:24734812 chr03:024734812 0 W/24734812-24734812 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.625823;DP=3730;DP4=2011,1692,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.78643e-06;MQSB=0.999783;RPB=0.901793;SGB=3.99491;VDB=0.478096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.3:24737507 chr03:024737507 0 W/24737507-24737507 FN2097-S SNP T -> A AC=1;AN=168;BQB=0.13418;DP=3838;DP4=2041,1739,16,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22384e-06;MQSB=0.999265;RPB=0.984181;SGB=-95.493;VDB=0.789894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.3:24739053 chr03:024739053 0 W/24739053-24739053 FN1264-S Single Base Substitution C-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.3:24739053 chr03:024739053 0 W/24739053-24739053 FN1320-S Single Base Substitution C-T INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN508-S.SNP.3:24739053 chr03:024739053 0 W/24739053-24739053 FN508-S Single Base Substitution C-T INTERGENIC HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN748-S.SNP.3:24739053 chr03:024739053 0 W/24739053-24739053 FN748-S Single Base Substitution C-T INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN545-S.SNP.3:24739741 chr03:024739741 0 W/24739741-24739741 FN545-S Single Base Substitution A-G INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN2645-S.SNP.3:24742001 chr03:024742001 0 W/24742001-24742001 FN2645-S SNP C -> T AC=2;AN=200;BQB=0.958398;DP=4927;DP4=2468,2168,28,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.2541e-28;MQSB=0.98164;RPB=0.486229;SGB=107.64;VDB=0.391278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.3:24751856 chr03:024751856 0 W/24751856-24751856 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.576609;DP=4041;DP4=1942,1802,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.6744e-13;MQSB=0.773207;RPB=0.734456;SGB=42.3199;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.3:24768776 chr03:024768776 0 W/24768776-24768776 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.577726;DP=1925;DP4=804,1071,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000703895;MQSB=0.965253;RPB=0.978494;SGB=8.33661;VDB=0.999671;EFF=INTRON(MODIFIER||||2012|LOC_Os03g44070|protein_coding|CODING|LOC_Os03g44070.1|1|1) FN2657-S.SNP.3:24784694 chr03:024784694 0 W/24784694-24784694 FN2657-S SNP A -> G AC=1;AN=200;BQB=0.766845;DP=4398;DP4=2296,1917,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05621e-11;MQSB=0.903921;RPB=0.69323;SGB=86.5007;VDB=0.5378;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.3:24786651 chr03:024786651 0 W/24786651-24786651 FN957-S Single Base Substitution G-T INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. 707-4.SNP.3:24789463 chr03:024789463 0 W/24789463-24789463 707-4 Single Base Substitution C-T INTERGENIC HET SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. 707-5.SNP.3:24789463 chr03:024789463 0 W/24789463-24789463 707-5 Single Base Substitution C-T INTERGENIC Homo SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. 707-7.SNP.3:24789463 chr03:024789463 0 W/24789463-24789463 707-7 Single Base Substitution C-T INTERGENIC HET SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN3957-S.SNP.3:24802105 chr03:024802105 0 W/24802105-24802105 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.972787;DP=3390;DP4=1537,1715,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.25222e-12;MQSB=0.998068;RPB=0.966015;SGB=39.2004;VDB=0.634645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S408N|1096|LOC_Os03g44140|protein_coding|CODING|LOC_Os03g44140.1|10|1) FN3828-S.SNP.3:24807347 chr03:024807347 0 W/24807347-24807347 FN3828-S SNP G -> A AC=1;AN=190;BQB=0.957987;DP=2765;DP4=1311,1362,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.87802e-06;MQSB=0.999509;RPB=0.774737;SGB=35.4339;VDB=0.922502;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.3:24810696 chr03:024810696 0 W/24810696-24810696 FN-86 Single Base Substitution G-A INTRON HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN2666-S.SNP.3:24811687 chr03:024811687 0 W/24811687-24811687 FN2666-S SNP T -> G AC=1;AN=200;BQB=0.976513;DP=4612;DP4=2383,2028,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79955e-11;MQSB=0.936672;RPB=0.591931;SGB=51.0851;VDB=0.557825;EFF=INTRON(MODIFIER||||473|LOC_Os03g44150|protein_coding|CODING|LOC_Os03g44150.1|9|1) FN1340-S.SNP.3:24815524 chr03:024815524 0 W/24815524-24815524 FN1340-S Single Base Substitution T-A INTRON HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN4260-S.SNP.3:24822020 chr03:024822020 0 W/24822020-24822020 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.854751;DP=2295;DP4=1191,1028,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.17572e-06;MQSB=0.668029;RPB=0.924172;SGB=43.4296;VDB=0.502759;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.3:24822203 chr03:024822203 0 W/24822203-24822203 FN1667-S SNP A -> T AC=1;AN=188;BQB=0.817552;DP=1869;DP4=1124,714,12,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.96098e-07;MQSB=0.581859;RPB=0.905521;SGB=23.5329;VDB=0.398222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.3:24823818 chr03:024823818 0 W/24823818-24823818 FN2545-S SNP C -> A AC=1;AN=198;BQB=0.387615;DP=3713;DP4=1827,1666,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000269324;MQB=1.23468e-06;MQSB=0.982222;RPB=0.992974;SGB=58.7391;VDB=0.13869;EFF=INTRON(MODIFIER||||87|LOC_Os03g44159|protein_coding|CODING|LOC_Os03g44159.1|1|1) FN2568-S.SNP.3:24825660 chr03:024825660 0 W/24825660-24825660 FN2568-S SNP A -> G AC=2;AN=198;BQB=0.43575;DP=4128;DP4=2057,1813,3,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.6734e-09;MQSB=0.299451;RPB=0.715263;SGB=63.3342;VDB=0.716755;EFF=UTR_3_PRIME(MODIFIER||130||232|LOC_Os03g44170|protein_coding|CODING|LOC_Os03g44170.1|1|1) FN3459-S.SNP.3:24838725 chr03:024838725 0 W/24838725-24838725 FN3459-S SNP C -> T AC=1;AN=184;BQB=0.502027;DP=2194;DP4=955,1179,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000809666;MQSB=0.962443;RPB=0.908345;SGB=26.1347;VDB=0.994431;EFF=INTRON(MODIFIER||||501|LOC_Os03g44200|protein_coding|CODING|LOC_Os03g44200.1|6|1),INTRON(MODIFIER||||501|LOC_Os03g44200|protein_coding|CODING|LOC_Os03g44200.2|6|1) FN898-S.SNP.3:24841757 chr03:024841757 0 W/24841757-24841757 FN898-S Single Base Substitution C-T INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3330-S.SNP.3:24845738 chr03:024845738 0 W/24845738-24845738 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.965319;DP=3146;DP4=1379,1668,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.21252e-09;MQSB=0.11213;RPB=0.9897;SGB=42.7914;VDB=0.205645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.3:24846797 chr03:024846797 0 W/24846797-24846797 FN2358 SNP T -> A AC=1;AN=192;BQB=0.872808;DP=4887;DP4=2510,2131,2,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.67327e-06;MQSB=0.999967;RPB=0.367034;SGB=40.0819;VDB=0.219282;EFF=INTRON(MODIFIER||||100|LOC_Os03g44220|protein_coding|CODING|LOC_Os03g44220.1|1|1) FN709-S.SNP.3:24849780 chr03:024849780 0 W/24849780-24849780 FN709-S Single Base Substitution G-A INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN_543-2-6.SNP.3:24867042 chr03:024867042 0 W/24867042-24867042 FN_543-2-6 Single Base Substitution C-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3515-S.SNP.3:24871869 chr03:024871869 0 W/24871869-24871869 FN3515-S SNP C -> A AC=2;AN=188;BQB=0.261122;DP=2906;DP4=1450,1375,16,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.21765e-11;MQSB=0.996416;RPB=0.784539;SGB=103.498;VDB=0.577367;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.3:24874723 chr03:024874723 0 W/24874723-24874723 FN3495-S SNP A -> G AC=1;AN=188;BQB=0.999826;DP=3099;DP4=1237,1775,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.90042e-10;MQSB=0.853716;RPB=0.673917;SGB=28.6195;VDB=0.663608;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.3:24874759 chr03:024874759 0 W/24874759-24874759 FN767-S Single Base Substitution G-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN3854-S.SNP.3:24883315 chr03:024883315 0 W/24883315-24883315 FN3854-S SNP G -> T AC=1;AN=158;BQB=0.654758;DP=2781;DP4=1144,1531,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00323625;MQB=0.0183295;MQSB=1.37924e-09;RPB=0.466909;SGB=33.9591;VDB=0.495905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.3:24891905 chr03:024891905 0 W/24891905-24891905 FN3495-S SNP G -> A AC=2;AN=188;BQB=0.362322;DP=3219;DP4=1278,1819,14,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.01473e-11;MQSB=0.0406597;RPB=0.585734;SGB=135.302;VDB=0.742988;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.3:24899797 chr03:024899797 0 W/24899797-24899797 FN-116 Single Base Substitution G-A INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN620-S.SNP.3:24900208 chr03:024900208 0 W/24900208-24900208 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1639-S.SNP.3:24900882 chr03:024900882 0 W/24900882-24900882 FN1639-S Single Base Substitution A-G INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN1639-S.SNP.3:24901335 chr03:024901335 0 W/24901335-24901335 FN1639-S Single Base Substitution T-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3959-S.SNP.3:24921357 chr03:024921357 0 W/24921357-24921357 FN3959-S SNP C -> T AC=1;AN=168;BQB=0.981359;DP=2591;DP4=1066,1420,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.23718e-06;MQSB=0.995891;RPB=0.575283;SGB=7.59999;VDB=0.078067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.3:24922299 chr03:024922299 0 W/24922299-24922299 FN2491 SNP T -> C AC=1;AN=200;BQB=0.659925;DP=4585;DP4=2151,2221,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.16846e-07;MQSB=0.118118;RPB=0.994504;SGB=19.0642;VDB=0.172889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.3:24927116 chr03:024927116 0 W/24927116-24927116 FN3919-S SNP C -> T AC=1;AN=158;BQB=0.397855;DP=2282;DP4=1197,997,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.22917e-07;MQSB=0.84231;RPB=0.349449;SGB=60.1755;VDB=0.807031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2104-S.SNP.3:24930321 chr03:024930321 0 W/24930321-24930321 FN2104-S SNP T -> C AC=1;AN=168;BQB=0.0336073;DP=4131;DP4=2218,1869,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.79847e-08;MQSB=0.998966;RPB=0.999851;SGB=-211.183;VDB=0.603885;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.3:24931632 chr03:024931632 0 W/24931632-24931632 FN-127 Single Base Substitution T-C INTRON HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-281.SNP.3:24937269 chr03:024937269 0 W/24937269-24937269 FN-281 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g44360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2659-S.SNP.3:24941984 chr03:024941984 0 W/24941984-24941984 FN2659-S SNP G -> A AC=2;AN=200;BQB=0.896715;DP=4646;DP4=2161,1975,24,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.22609e-30;MQSB=0.983758;RPB=0.539164;SGB=68.8812;VDB=0.203183;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:24941985 chr03:024941985 0 W/24941985-24941985 FN2659-S SNP C -> T AC=2;AN=200;BQB=0.977385;DP=4648;DP4=2348,1952,23,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.11617e-30;MQSB=0.979488;RPB=0.691756;SGB=184.476;VDB=0.271422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.3:24943668 chr03:024943668 0 W/24943668-24943668 FN3693-S SNP G -> A AC=1;AN=190;BQB=0.348787;DP=2598;DP4=1145,1333,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75397e-05;MQSB=0.801131;RPB=0.233644;SGB=21.1058;VDB=0.337067;EFF=INTRON(MODIFIER||||868|LOC_Os03g44370|protein_coding|CODING|LOC_Os03g44370.1|5|1) FN3330-S.SNP.3:24946096 chr03:024946096 0 W/24946096-24946096 FN3330-S SNP A -> G AC=1;AN=184;BQB=0.959821;DP=2507;DP4=884,1506,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000797766;MQB=0.00247662;MQSB=0.00541527;RPB=0.802601;SGB=21.6609;VDB=0.919625;EFF=INTRON(MODIFIER||||868|LOC_Os03g44370|protein_coding|CODING|LOC_Os03g44370.1|3|1) FN-286.SNP.3:24947108 chr03:024947108 0 W/24947108-24947108 FN-286 Single Base Substitution G-T INTRON HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2354.SNP.3:24950322 chr03:024950322 0 W/24950322-24950322 FN2354 SNP G -> A AC=1;AN=192;BQB=0.651056;DP=4814;DP4=2356,2181,18,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.90355e-17;MQSB=0.885544;RPB=0.958713;SGB=-80.293;VDB=0.505834;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.3:24955652 chr03:024955652 0 W/24955652-24955652 FN1732-S SNP G -> A AC=2;AN=188;BQB=0.677779;DP=3273;DP4=1531,1666,24,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.5238e-18;MQSB=0.935177;RPB=0.864872;SGB=-49.2389;VDB=0.148281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.3:24965459 chr03:024965459 0 W/24965459-24965459 FN2788-S SNP A -> T AC=2;AN=198;BQB=0.62444;DP=4081;DP4=2130,1720,28,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.25121e-31;MQSB=0.999235;RPB=0.991116;SGB=180.359;VDB=0.420878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.3:24972335 chr03:024972335 0 W/24972335-24972335 FN3629-S SNP C -> A AC=2;AN=190;BQB=0.933995;DP=1766;DP4=823,867,10,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00339751;MQB=9.71249e-07;MQSB=0.378363;RPB=0.998875;SGB=80.9724;VDB=0.241622;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P78|1881|LOC_Os03g44390|protein_coding|CODING|LOC_Os03g44390.1|1|1) FN3554-S.SNP.3:24973032 chr03:024973032 0 W/24973032-24973032 FN3554-S SNP C -> T AC=1;AN=188;BQB=0.99998;DP=4303;DP4=1945,2279,15,15;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0127818;MQB=0.717634;MQSB=0.718267;RPB=0.718375;SGB=130.758;VDB=0.260889;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q311*|1881|LOC_Os03g44390|protein_coding|CODING|LOC_Os03g44390.1|1|1);LOF=(LOC_Os03g44390|LOC_Os03g44390|1|1.00);NMD=(LOC_Os03g44390|LOC_Os03g44390|1|1.00) FN2575-S.SNP.3:24973245 chr03:024973245 0 W/24973245-24973245 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.987205;DP=3528;DP4=1667,1628,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.17019e-08;MQSB=0.963532;RPB=0.718119;SGB=77.1196;VDB=0.964377;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A382T|1881|LOC_Os03g44390|protein_coding|CODING|LOC_Os03g44390.1|1|1) FN516-S.SNP.3:24973955 chr03:024973955 0 W/24973955-24973955 FN516-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN319-S.SNP.3:24981623 chr03:024981623 0 W/24981623-24981623 FN319-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g44400 retrotransposon protein, putative, unclassified, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2573-S.SNP.3:24983006 chr03:024983006 0 W/24983006-24983006 FN2573-S SNP C -> G AC=1;AN=198;BQB=0.99311;DP=3605;DP4=2072,1332,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.060749;MQB=0.949056;MQSB=0.927465;RPB=0.997214;SGB=40.3588;VDB=0.653136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.3:24983914 chr03:024983914 0 W/24983914-24983914 FN3536-S SNP A -> G AC=1;AN=188;BQB=0.834381;DP=3203;DP4=1511,1549,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000229534;MQSB=0.876736;RPB=0.132867;SGB=25.3545;VDB=0.0194987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.3:24989988 chr03:024989988 0 W/24989988-24989988 FN1402-S Single Base Substitution A-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3837-S.SNP.3:24990753 chr03:024990753 0 W/24990753-24990753 FN3837-S SNP T -> A AC=1;AN=190;BQB=0.812407;DP=2820;DP4=1340,1359,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.44476e-09;MQSB=0.96237;RPB=0.88904;SGB=36.1006;VDB=0.30927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.3:24991176 chr03:024991176 0 W/24991176-24991176 FN1402-S Single Base Substitution G-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1402-S.SNP.3:24991177 chr03:024991177 0 W/24991177-24991177 FN1402-S Single Base Substitution G-A INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2652-S.SNP.3:24991745 chr03:024991745 0 W/24991745-24991745 FN2652-S SNP A -> G AC=1;AN=200;BQB=0.970924;DP=5162;DP4=2305,2640,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04992e-13;MQSB=0.994035;RPB=0.986846;SGB=55.5366;VDB=0.892941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.3:24998468 chr03:024998468 0 W/24998468-24998468 FN3526-S SNP G -> T AC=1;AN=188;BQB=0.945512;DP=2534;DP4=1251,1216,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.17778e-08;MQSB=0.846632;RPB=0.905765;SGB=48.979;VDB=0.746961;EFF=INTRON(MODIFIER||||452|LOC_Os03g44420|protein_coding|CODING|LOC_Os03g44420.1|4|1) FN3725-S.SNP.3:24998849 chr03:024998849 0 W/24998849-24998849 FN3725-S SNP G -> C AC=1;AN=190;BQB=0.951992;DP=2737;DP4=1370,1267,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.81405e-08;MQSB=0.926442;RPB=0.756578;SGB=39.6545;VDB=0.977247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A324P|452|LOC_Os03g44420|protein_coding|CODING|LOC_Os03g44420.1|5|1) FN915-S.SNP.3:25002069 chr03:025002069 0 W/25002069-25002069 FN915-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3390-S.SNP.3:25004460 chr03:025004460 0 W/25004460-25004460 FN3390-S SNP G -> A AC=2;AN=184;BQB=0.812428;DP=3273;DP4=1763,1413,10,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.11315e-12;MQSB=0.994636;RPB=0.439159;SGB=80.3949;VDB=0.193982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A186T|711|LOC_Os03g44440|protein_coding|CODING|LOC_Os03g44440.1|2|1) FN3945-S.SNP.3:25004798 chr03:025004798 0 W/25004798-25004798 FN3945-S SNP T -> C AC=2;AN=168;BQB=0.900304;DP=3051;DP4=1200,1677,10,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.12616e-18;MQSB=0.976202;RPB=0.170945;SGB=136.358;VDB=0.261373;EFF=INTRON(MODIFIER||||711|LOC_Os03g44440|protein_coding|CODING|LOC_Os03g44440.1|2|1) FN2456.SNP.3:25006039 chr03:025006039 0 W/25006039-25006039 FN2456 SNP G -> T AC=1;AN=200;BQB=0.460086;DP=4209;DP4=2318,1637,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62393e-08;MQSB=0.833578;RPB=0.759814;SGB=54.2646;VDB=0.413129;EFF=INTRON(MODIFIER||||711|LOC_Os03g44440|protein_coding|CODING|LOC_Os03g44440.1|3|1) FN4206-S.SNP.3:25008241 chr03:025008241 0 W/25008241-25008241 FN4206-S SNP T -> C AC=1;AN=170;BQB=0.369495;DP=2445;DP4=1203,1118,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00410302;MQSB=0.0566999;RPB=0.947276;SGB=21.1076;VDB=0.288493;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.3:25016792 chr03:025016792 0 W/25016792-25016792 FN732-S Single Base Substitution T-C INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN3705-S.SNP.3:25016828 chr03:025016828 0 W/25016828-25016828 FN3705-S SNP C -> T AC=1;AN=190;BQB=0.325603;DP=1736;DP4=1095,555,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.108871;MQB=0.282864;MQSB=8.79183e-13;RPB=0.0758588;SGB=49.0954;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.3:25019319 chr03:025019319 0 W/25019319-25019319 FN1602-S Single Base Substitution C-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1406-S.SNP.3:25022718 chr03:025022718 0 W/25022718-25022718 FN1406-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g44460 retrotransposon protein, putative, unclassified, expressed SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2378.SNP.3:25024031 chr03:025024031 0 W/25024031-25024031 FN2378 SNP G -> A AC=1;AN=192;BQB=0.906109;DP=5216;DP4=2532,2409,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.2788e-09;MQSB=0.999405;RPB=0.902276;SGB=39.78;VDB=0.896603;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.3:25024420 chr03:025024420 0 W/25024420-25024420 FN519-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g44470 retrotransposon protein, putative, unclassified, expressed SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN558-S.SNP.3:25037541 chr03:025037541 0 W/25037541-25037541 FN558-S Single Base Substitution T-C INTRON HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2178-S.SNP.3:25044447 chr03:025044447 0 W/25044447-25044447 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.941543;DP=3982;DP4=1943,1994,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22604e-13;MQSB=0.972126;RPB=0.717512;SGB=-11.4952;VDB=0.643893;EFF=INTRON(MODIFIER||||1003|LOC_Os03g44500|protein_coding|CODING|LOC_Os03g44500.1|14|1) FN3323-S.SNP.3:25044447 chr03:025044447 0 W/25044447-25044447 FN3323-S SNP G -> A AC=2;AN=184;BQB=0.975626;DP=2437;DP4=994,1366,9,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16796e-10;MQSB=0.512347;RPB=0.928643;SGB=80.3949;VDB=0.510572;EFF=INTRON(MODIFIER||||1003|LOC_Os03g44500|protein_coding|CODING|LOC_Os03g44500.1|14|1) FN3844-S.SNP.3:25044447 chr03:025044447 0 W/25044447-25044447 FN3844-S SNP G -> A AC=2;AN=190;BQB=0.896456;DP=2378;DP4=1046,1267,3,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.07257e-06;MQSB=0.947189;RPB=0.947735;SGB=49.0954;VDB=0.728304;EFF=INTRON(MODIFIER||||1003|LOC_Os03g44500|protein_coding|CODING|LOC_Os03g44500.1|14|1) FN4080-S.SNP.3:25044447 chr03:025044447 0 W/25044447-25044447 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.999208;DP=2582;DP4=1122,1396,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.20781e-08;MQSB=0.716192;RPB=0.980846;SGB=48.6223;VDB=0.66732;EFF=INTRON(MODIFIER||||1003|LOC_Os03g44500|protein_coding|CODING|LOC_Os03g44500.1|14|1) FN476-S.SNP.3:25049115 chr03:025049115 0 W/25049115-25049115 FN476-S Single Base Substitution T-C SPLICE_SITE_ACCEPTOR HET LOC_Os03g44500 serine/threonine protein phosphatase, putative, expressed SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.3:25049115 chr03:025049115 0 W/25049115-25049115 FN935-S Single Base Substitution T-C INTRON HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN3382-S.SNP.3:25066894 chr03:025066894 0 W/25066894-25066894 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.184116;DP=3869;DP4=976,2653,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000126307;MQSB=0.327519;RPB=0.680191;SGB=-15.2358;VDB=0.636381;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.3:25068149 chr03:025068149 0 W/25068149-25068149 FN544-S Single Base Substitution G-A INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN1278-S.SNP.3:25078048 chr03:025078048 0 W/25078048-25078048 FN1278-S Single Base Substitution T-C INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1695-S.SNP.3:25083001 chr03:025083001 0 W/25083001-25083001 FN1695-S SNP A -> T AC=1;AN=188;BQB=0.200059;DP=3442;DP4=1242,2162,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0287623;MQB=1.13796e-05;MQSB=0.000169869;RPB=0.772846;SGB=43.8792;VDB=0.200366;EFF=INTRON(MODIFIER||||352|LOC_Os03g44550|protein_coding|CODING|LOC_Os03g44550.1|1|1) FN1695-S.SNP.3:25083002 chr03:025083002 0 W/25083002-25083002 FN1695-S SNP C -> T AC=1;AN=188;BQB=0.0554304;DP=3483;DP4=1243,2201,14,15;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0301464;MQB=0.0267696;MQSB=2.18974e-05;RPB=0.106851;SGB=-142.089;VDB=0.108326;EFF=INTRON(MODIFIER||||352|LOC_Os03g44550|protein_coding|CODING|LOC_Os03g44550.1|1|1) FN587-S.SNP.3:25087679 chr03:025087679 0 W/25087679-25087679 FN587-S Single Base Substitution C-T INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2433.SNP.3:25096166 chr03:025096166 0 W/25096166-25096166 FN2433 SNP G -> C AC=2;AN=200;BQB=0.216418;DP=4178;DP4=1916,2013,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04996e-21;MQSB=0.970313;RPB=0.623699;SGB=-44.0018;VDB=0.260053;EFF=INTRON(MODIFIER||||245|LOC_Os03g44560|protein_coding|CODING|LOC_Os03g44560.1|1|1) FN3774-S.SNP.3:25097706 chr03:025097706 0 W/25097706-25097706 FN3774-S SNP C -> T AC=1;AN=190;BQB=0.992399;DP=3165;DP4=1422,1654,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37619e-05;MQSB=0.722814;RPB=0.977805;SGB=39.9877;VDB=0.422799;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.3:25100699 chr03:025100699 0 W/25100699-25100699 FN473-S Single Base Substitution T-C INTERGENIC HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1215-S.SNP.3:25110728 chr03:025110728 0 W/25110728-25110728 FN1215-S Single Base Substitution C-T INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1552-S.SNP.3:25116563 chr03:025116563 0 W/25116563-25116563 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.192054;DP=3409;DP4=1614,1758,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.6021e-09;MQSB=0.80808;RPB=0.987251;SGB=16.3413;VDB=0.915757;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P422S|440|LOC_Os03g44610|protein_coding|CODING|LOC_Os03g44610.1|7|1) FN523-S.SNP.3:25123008 chr03:025123008 0 W/25123008-25123008 FN523-S Single Base Substitution T-C INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.3:25123008 chr03:025123008 0 W/25123008-25123008 FN532-S Single Base Substitution T-C INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2468.SNP.3:25125238 chr03:025125238 0 W/25125238-25125238 FN2468 SNP G -> A AC=2;AN=200;BQB=0.996054;DP=4572;DP4=2210,2092,11,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.6123e-11;MQSB=0.969988;RPB=0.41434;SGB=81.8956;VDB=0.677303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.3:25125935 chr03:025125935 0 W/25125935-25125935 FN2321 SNP C -> T AC=2;AN=192;BQB=0.710189;DP=5241;DP4=2470,2326,32,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.61335e-27;MQSB=0.844805;RPB=0.841294;SGB=245.477;VDB=0.923871;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.3:25129083 chr03:025129083 0 W/25129083-25129083 FN-356 Single Base Substitution A-G INTRON HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN4142-S.SNP.3:25137089 chr03:025137089 0 W/25137089-25137089 FN4142-S SNP C -> A AC=1;AN=170;BQB=0.802286;DP=2463;DP4=1220,1147,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.54175e-09;MQSB=0.0438123;RPB=0.997238;SGB=41.7633;VDB=0.102778;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.3:25138720 chr03:025138720 0 W/25138720-25138720 FN1304-S Single Base Substitution T-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2134-S.SNP.3:25141790 chr03:025141790 0 W/25141790-25141790 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.235824;DP=3610;DP4=2420,1143,18,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.03564e-09;MQSB=0.819657;RPB=0.413065;SGB=-72.7757;VDB=0.039228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-130.SNP.3:25151852 chr03:025151852 0 W/25151852-25151852 FN-130 Single Base Substitution C-T INTERGENIC HET SNo: 130, Mutant_ID: FN-130, Generation: M2, Mutations: 30, Genes: 61, Seed availability: Yes. FN3294-S.SNP.3:25156189 chr03:025156189 0 W/25156189-25156189 FN3294-S SNP T -> C AC=2;AN=184;BQB=0.439203;DP=2926;DP4=1271,1552,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.77242e-12;MQSB=0.926563;RPB=0.138119;SGB=74.4875;VDB=0.892823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.3:25159324 chr03:025159324 0 W/25159324-25159324 FN3599-S SNP T -> A AC=1;AN=188;BQB=0.586014;DP=2801;DP4=1274,1427,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21869e-06;MQSB=0.988114;RPB=0.983356;SGB=20.9896;VDB=0.162373;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.3:25162625 chr03:025162625 0 W/25162625-25162625 FN971-S Single Base Substitution T-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-174.SNP.3:25163696 chr03:025163696 0 W/25163696-25163696 FN-174 Single Base Substitution T-A INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3301-S.SNP.3:25165612 chr03:025165612 0 W/25165612-25165612 FN3301-S SNP T -> C AC=1;AN=184;BQB=0.954661;DP=2929;DP4=1609,1175,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.6236e-08;MQSB=0.857361;RPB=0.894399;SGB=57.786;VDB=0.398535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.3:25167344 chr03:025167344 0 W/25167344-25167344 FN3293-S SNP C -> A AC=1;AN=184;BQB=0.821118;DP=2767;DP4=1026,1636,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.86166e-10;MQSB=0.996777;RPB=0.964465;SGB=66.8296;VDB=0.557628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.3:25167345 chr03:025167345 0 W/25167345-25167345 FN3293-S SNP A -> C AC=1;AN=184;BQB=0.699624;DP=2774;DP4=1003,1534,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.86931e-10;MQSB=0.960859;RPB=0.999876;SGB=-38.1432;VDB=0.51863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.3:25175765 chr03:025175765 0 W/25175765-25175765 FN-114 Single Base Substitution T-G INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3715-S.SNP.3:25176740 chr03:025176740 0 W/25176740-25176740 FN3715-S SNP A -> G AC=2;AN=190;BQB=0.993218;DP=2624;DP4=1112,1357,15,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.35857e-19;MQSB=0.944027;RPB=0.91844;SGB=114.286;VDB=0.430911;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.3:25180780 chr03:025180780 0 W/25180780-25180780 FN482-S Single Base Substitution C-T INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN1286-S.SNP.3:25188174 chr03:025188174 0 W/25188174-25188174 FN1286-S Single Base Substitution G-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3506-S.SNP.3:25204984 chr03:025204984 0 W/25204984-25204984 FN3506-S SNP C -> T AC=2;AN=188;BQB=0.99747;DP=2446;DP4=944,1423,3,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.95719e-08;MQSB=0.76214;RPB=0.302883;SGB=62.6088;VDB=0.232431;EFF=INTRON(MODIFIER||||186|LOC_Os03g44710|protein_coding|CODING|LOC_Os03g44710.1|3|1),INTRON(MODIFIER||||186|LOC_Os03g44710|protein_coding|CODING|LOC_Os03g44710.2|4|1),INTRON(MODIFIER||||122|LOC_Os03g44710|protein_coding|CODING|LOC_Os03g44710.3|3|1) FN950-S.SNP.3:25210600 chr03:025210600 0 W/25210600-25210600 FN950-S Single Base Substitution A-T INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2708-S.SNP.3:25214290 chr03:025214290 0 W/25214290-25214290 FN2708-S SNP G -> C AC=1;AN=200;BQB=0.20709;DP=4438;DP4=2162,2017,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67167e-11;MQSB=0.955984;RPB=0.735498;SGB=72.7161;VDB=0.210217;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.3:25216879 chr03:025216879 0 W/25216879-25216879 FN-392 Single Base Substitution T-C INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN1572-S.SNP.3:25218515 chr03:025218515 0 W/25218515-25218515 FN1572-S Single Base Substitution A-T INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN2278-S.SNP.3:25218515 chr03:025218515 0 W/25218515-25218515 FN2278-S SNP A -> T AC=2;AN=190;BQB=0.977504;DP=4916;DP4=2498,2072,44,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48177e-35;MQSB=0.975524;RPB=0.745536;SGB=83.3588;VDB=0.161312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.3:25218515 chr03:025218515 0 W/25218515-25218515 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.998781;DP=3102;DP4=1339,1629,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32646e-09;MQSB=0.876196;RPB=0.719683;SGB=49.835;VDB=0.567312;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.3:25218515 chr03:025218515 0 W/25218515-25218515 FN482-S Single Base Substitution A-T INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN548-S.SNP.3:25219144 chr03:025219144 0 W/25219144-25219144 FN548-S Single Base Substitution T-C INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN480-S.SNP.3:25220147 chr03:025220147 0 W/25220147-25220147 FN480-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1072-S.SNP.3:25221726 chr03:025221726 0 W/25221726-25221726 FN1072-S Single Base Substitution G-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1389-S.SNP.3:25222710 chr03:025222710 0 W/25222710-25222710 FN1389-S Single Base Substitution G-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3637-S.SNP.3:25222853 chr03:025222853 0 W/25222853-25222853 FN3637-S SNP G -> T AC=2;AN=190;BQB=0.912748;DP=3125;DP4=1685,1286,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1829e-14;MQSB=0.966109;RPB=0.290418;SGB=92.9626;VDB=0.458327;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.3:25222853 chr03:025222853 0 W/25222853-25222853 FN431-S Single Base Substitution G-T INTERGENIC HOMO SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN1076-S.SNP.3:25225033 chr03:025225033 0 W/25225033-25225033 FN1076-S Single Base Substitution G-A INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2740-S.SNP.3:25228833 chr03:025228833 0 W/25228833-25228833 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.984426;DP=4727;DP4=2052,2392,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.69638e-10;MQSB=0.984584;RPB=0.753157;SGB=58.2954;VDB=0.513134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.3:25244656 chr03:025244656 0 W/25244656-25244656 FN2500 SNP C -> T AC=2;AN=200;BQB=0.867021;DP=4501;DP4=1732,2381,14,26;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0;MQB=3.98707e-10;MQSB=0.298294;RPB=0.913378;SGB=134.004;VDB=0.714816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.3:25259605 chr03:025259605 0 W/25259605-25259605 FN3868-S SNP T -> A AC=2;AN=158;BQB=0.434714;DP=2603;DP4=994,1522,3,9;HOB=0.024996;ICB=0.493752;MQ=30;MQ0F=0;MQB=0.909613;MQSB=0.0759867;RPB=0.358625;SGB=30.704;VDB=0.705512;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.3:25268083 chr03:025268083 0 W/25268083-25268083 FN485-S Single Base Substitution A-T INTERGENIC HOMO SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN512-S.SNP.3:25275290 chr03:025275290 0 W/25275290-25275290 FN512-S Single Base Substitution C-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2274-S.SNP.3:25277321 chr03:025277321 0 W/25277321-25277321 FN2274-S SNP C -> A AC=1;AN=190;BQB=0.890162;DP=5064;DP4=2526,2188,22,19;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.56962e-22;MQSB=0.973405;RPB=0.761135;SGB=-1.03669;VDB=0.263869;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V99|153|LOC_Os03g44820|protein_coding|CODING|LOC_Os03g44820.1|3|1) FN2274-S.SNP.3:25277322 chr03:025277322 0 W/25277322-25277322 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.788547;DP=5067;DP4=2488,2146,20,20;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000197355;MQB=2.4467e-20;MQSB=0.998138;RPB=0.961444;SGB=-46.1392;VDB=0.288852;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D100N|153|LOC_Os03g44820|protein_coding|CODING|LOC_Os03g44820.1|3|1) FN1204-S.SNP.3:25285566 chr03:025285566 0 W/25285566-25285566 FN1204-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g44830 OsRhmbd9 - Putative Rhomboid homologue, expressed SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN3095-S.SNP.3:25287298 chr03:025287298 0 W/25287298-25287298 FN3095-S SNP G -> A AC=2;AN=184;BQB=0.98992;DP=3460;DP4=1728,1602,20,22;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=1.28941e-09;MQSB=0.443992;RPB=0.920744;SGB=184.396;VDB=0.0389879;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.3:25287675 chr03:025287675 0 W/25287675-25287675 FN3657-S SNP A -> T AC=1;AN=190;BQB=0.653956;DP=3139;DP4=1352,1645,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69779e-08;MQSB=0.95028;RPB=0.984568;SGB=50.3161;VDB=0.434266;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.3:25296654 chr03:025296654 0 W/25296654-25296654 FN-278 Single Base Substitution C-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-386.SNP.3:25300266 chr03:025300266 0 W/25300266-25300266 FN-386 Single Base Substitution A-C INTRON HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1269-S.SNP.3:25307441 chr03:025307441 0 W/25307441-25307441 FN1269-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN4063-S.SNP.3:25309571 chr03:025309571 0 W/25309571-25309571 FN4063-S SNP A -> G AC=1;AN=168;BQB=0.999604;DP=2717;DP4=1342,1250,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.71266e-05;MQSB=0.949865;RPB=0.291039;SGB=38.1788;VDB=0.196668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.3:25319413 chr03:025319413 0 W/25319413-25319413 FN3943-S SNP C -> T AC=1;AN=168;BQB=0.985657;DP=3018;DP4=1669,1224,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=6.28446e-08;MQSB=0.865234;RPB=0.997615;SGB=11.3448;VDB=0.971586;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.3:25325290 chr03:025325290 0 W/25325290-25325290 FN4077-S SNP C -> T AC=1;AN=182;BQB=0.989268;DP=3200;DP4=1617,1486,13,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.61168e-11;MQSB=0.937719;RPB=0.0542246;SGB=70.7363;VDB=0.316623;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.3:25329885 chr03:025329885 0 W/25329885-25329885 FN820-S Single Base Substitution C-G UTR_5_PRIME HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN-214.SNP.3:25352262 chr03:025352262 0 W/25352262-25352262 FN-214 Single Base Substitution C-G INTERGENIC HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2281.SNP.3:25355708 chr03:025355708 0 W/25355708-25355708 FN2281 SNP C -> T AC=1;AN=192;BQB=0.990244;DP=2550;DP4=1475,577,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.000150129;MQSB=3.33341e-41;RPB=0.629282;SGB=-14.2043;VDB=0.162533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T126M|212|LOC_Os03g44910|protein_coding|CODING|LOC_Os03g44910.1|1|1) FN633-S.SNP.3:25358315 chr03:025358315 0 W/25358315-25358315 FN633-S Single Base Substitution C-T INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN497-S.SNP.3:25359798 chr03:025359798 0 W/25359798-25359798 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1697-S.SNP.3:25374096 chr03:025374096 0 W/25374096-25374096 FN1697-S SNP T -> G AC=1;AN=188;BQB=0.460248;DP=2179;DP4=1289,849,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.35834e-05;MQSB=0.422769;RPB=0.99803;SGB=28.6195;VDB=0.0194374;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A248|670|LOC_Os03g44940|protein_coding|CODING|LOC_Os03g44940.1|4|1) FN3436-S.SNP.3:25377548 chr03:025377548 0 W/25377548-25377548 FN3436-S SNP G -> A AC=1;AN=184;BQB=0.987474;DP=3015;DP4=1796,1106,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=5.97939e-08;MQSB=0.128864;RPB=0.934774;SGB=60.4004;VDB=0.438189;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A382V|401|LOC_Os03g44950|protein_coding|CODING|LOC_Os03g44950.1|2|1) FN681-S.SNP.3:25379857 chr03:025379857 0 W/25379857-25379857 FN681-S Single Base Substitution A-T INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2622-S.SNP.3:25384135 chr03:025384135 0 W/25384135-25384135 FN2622-S SNP G -> A AC=2;AN=200;BQB=0.299497;DP=4971;DP4=2237,2424,36,40;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.69426e-25;MQSB=0.34313;RPB=0.0371171;SGB=296.198;VDB=0.00918579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.3:25385275 chr03:025385275 0 W/25385275-25385275 FN3502-S SNP T -> C AC=2;AN=188;BQB=0.706675;DP=2204;DP4=1064,1071,10,5;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=0.00516089;MQSB=0.511424;RPB=0.487512;SGB=62.6088;VDB=0.312197;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.3:25388677 chr03:025388677 0 W/25388677-25388677 FN781-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g44970 hypothetical protein SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1746-S.SNP.3:25397205 chr03:025397205 0 W/25397205-25397205 FN1746-S SNP G -> A AC=2;AN=188;BQB=0.999314;DP=2451;DP4=754,1652,13,15;HOB=0.0210502;ICB=0.494738;MQ=31;MQ0F=0.00122399;MQB=0.0261545;MQSB=0.302192;RPB=0.736608;SGB=-8.48022;VDB=0.00242287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.3:25399985 chr03:025399985 0 W/25399985-25399985 FN2232-S SNP G -> A AC=1;AN=190;BQB=0.880235;DP=4862;DP4=2229,2240,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00102838;MQB=3.70781e-05;MQSB=0.940394;RPB=0.495899;SGB=99.1879;VDB=0.50366;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.3:25404930 chr03:025404930 0 W/25404930-25404930 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.437031;DP=2798;DP4=1524,1197,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=4.33051e-08;MQSB=0.62355;RPB=0.65854;SGB=57.244;VDB=0.470232;EFF=INTRON(MODIFIER||||322|LOC_Os03g45000|protein_coding|CODING|LOC_Os03g45000.1|3|1) FN2331.SNP.3:25415069 chr03:025415069 0 W/25415069-25415069 FN2331 SNP C -> T AC=2;AN=192;BQB=0.778131;DP=2292;DP4=2041,123,21,0;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0;MQB=0.00502015;MQSB=1.89482e-06;RPB=0.532211;SGB=90.2896;VDB=0.0736042;EFF=INTRON(MODIFIER||||1202|LOC_Os03g45030|protein_coding|CODING|LOC_Os03g45030.1|2|1) FN837-S.SNP.3:25417712 chr03:025417712 0 W/25417712-25417712 FN837-S Single Base Substitution G-A INTRON HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. W502-3-4.SNP.3:25421026 chr03:025421026 0 W/25421026-25421026 W502-3-4 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g45040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN3358-S.SNP.3:25454923 chr03:025454923 0 W/25454923-25454923 FN3358-S SNP G -> T AC=1;AN=184;BQB=0.999104;DP=2749;DP4=1237,1422,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.0329964;MQSB=3.23862e-09;RPB=0.847811;SGB=53.2642;VDB=0.401988;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.3:25455238 chr03:025455238 0 W/25455238-25455238 FN_N1-130-1 Single Base Substitution G-C HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2751-S.SNP.3:25457087 chr03:025457087 0 W/25457087-25457087 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.907604;DP=4813;DP4=2386,2223,4,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0;MQB=0.000823919;MQSB=0.931254;RPB=0.653918;SGB=35.8441;VDB=0.326267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S408L|487|LOC_Os03g45110|protein_coding|CODING|LOC_Os03g45110.1|2|1) FN2119-S.SNP.3:25460195 chr03:025460195 0 W/25460195-25460195 FN2119-S SNP A -> T AC=1;AN=168;BQB=0.999096;DP=3350;DP4=1688,1634,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00801728;MQSB=0.857385;RPB=0.491234;SGB=29.4772;VDB=0.0391228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.3:25464215 chr03:025464215 0 W/25464215-25464215 FN1748-S SNP G -> A AC=1;AN=188;BQB=0.77103;DP=3354;DP4=1685,1636,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.73709e-10;MQSB=0.999909;RPB=0.859757;SGB=-35.5377;VDB=0.959025;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F110|353|LOC_Os03g45120|protein_coding|CODING|LOC_Os03g45120.1|7|1) FN2412.SNP.3:25464291 chr03:025464291 0 W/25464291-25464291 FN2412 SNP C -> T AC=1;AN=200;BQB=0.44074;DP=3836;DP4=1377,2253,3,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.0656507;MQSB=1.24987e-11;RPB=0.633532;SGB=33.0593;VDB=0.911296;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||353|LOC_Os03g45120|protein_coding|CODING|LOC_Os03g45120.1|7|1),INTRON(MODIFIER||||353|LOC_Os03g45120|protein_coding|CODING|LOC_Os03g45120.1|6|1);LOF=(LOC_Os03g45120|LOC_Os03g45120|1|1.00) FN2204-S.SNP.3:25464441 chr03:025464441 0 W/25464441-25464441 FN2204-S SNP T -> C AC=1;AN=190;BQB=0.404864;DP=4583;DP4=2368,1926,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0;MQB=3.20665e-08;MQSB=6.88255e-34;RPB=0.879034;SGB=153.834;VDB=0.112717;EFF=INTRON(MODIFIER||||353|LOC_Os03g45120|protein_coding|CODING|LOC_Os03g45120.1|6|1) FN2177-S.SNP.3:25468794 chr03:025468794 0 W/25468794-25468794 FN2177-S SNP T -> A AC=1;AN=168;BQB=0.15466;DP=3041;DP4=1742,1243,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=0.0945757;MQSB=0.000144803;RPB=0.995644;SGB=24.6155;VDB=0.471111;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.3:25474782 chr03:025474782 0 W/25474782-25474782 FN-149 Single Base Substitution T-C INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN-381.SNP.3:25475000 chr03:025475000 0 W/25475000-25475000 FN-381 Single Base Substitution G-C INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN1186-S.SNP.3:25477630 chr03:025477630 0 W/25477630-25477630 FN1186-S Single Base Substitution A-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2364.SNP.3:25496815 chr03:025496815 0 W/25496815-25496815 FN2364 SNP T -> C AC=1;AN=192;BQB=0.54966;DP=5009;DP4=1730,3015,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=4.98076e-06;MQSB=0.26582;RPB=0.474049;SGB=46.9087;VDB=0.207427;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:25502525 chr03:025502525 0 W/25502525-25502525 FN438-S Single Base Substitution G-T INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN4272-S.SNP.3:25503142 chr03:025503142 0 W/25503142-25503142 FN4272-S SNP A -> G AC=2;AN=170;BQB=0.725249;DP=3054;DP4=1424,1482,36,21;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.000327439;MQB=1.03279e-18;MQSB=0.0275287;RPB=0.994199;SGB=176.507;VDB=0.518143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.3:25516387 chr03:025516387 0 W/25516387-25516387 FN2191-S SNP A -> G AC=1;AN=190;BQB=0.19257;DP=4812;DP4=2254,2289,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000207814;MQB=0.0135172;MQSB=0.541129;RPB=0.954472;SGB=30.8803;VDB=0.969493;EFF=INTRON(MODIFIER||||539|LOC_Os03g45180|protein_coding|CODING|LOC_Os03g45180.1|1|1),INTRON(MODIFIER||||411|LOC_Os03g45180|protein_coding|CODING|LOC_Os03g45180.2|1|1) FN3478-S.SNP.3:25516861 chr03:025516861 0 W/25516861-25516861 FN3478-S SNP C -> T AC=2;AN=184;BQB=0.972528;DP=3191;DP4=1950,1101,16,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.04718e-15;MQSB=0.951087;RPB=0.821;SGB=125.613;VDB=0.0828092;EFF=INTRON(MODIFIER||||539|LOC_Os03g45180|protein_coding|CODING|LOC_Os03g45180.1|1|1),INTRON(MODIFIER||||411|LOC_Os03g45180|protein_coding|CODING|LOC_Os03g45180.2|1|1) FN836-S.SNP.3:25521056 chr03:025521056 0 W/25521056-25521056 FN836-S Single Base Substitution G-A INTRON HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-157.SNP.3:25522233 chr03:025522233 0 W/25522233-25522233 FN-157 Single Base Substitution T-C INTRON HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN570-S.SNP.3:25526419 chr03:025526419 0 W/25526419-25526419 FN570-S Single Base Substitution G-T INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2575-S.SNP.3:25532883 chr03:025532883 0 W/25532883-25532883 FN2575-S SNP G -> A AC=2;AN=198;BQB=0.852121;DP=4457;DP4=2119,2005,42,37;HOB=0.019998;ICB=0.495001;MQ=40;MQ0F=0;MQB=1.38792e-24;MQSB=0.732945;RPB=0.928422;SGB=307.749;VDB=0.00102434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.3:25559322 chr03:025559322 0 W/25559322-25559322 FN3514-S SNP C -> T AC=2;AN=188;BQB=0.623386;DP=2572;DP4=1132,1297,11,7;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=4.71241e-07;MQSB=0.000358844;RPB=0.558097;SGB=31.1628;VDB=0.914786;EFF=INTRON(MODIFIER||||154|LOC_Os03g45270|protein_coding|CODING|LOC_Os03g45270.1|2|1) FN1350-S.SNP.3:25561829 chr03:025561829 0 W/25561829-25561829 FN1350-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN1350-S.SNP.3:25561833 chr03:025561833 0 W/25561833-25561833 FN1350-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN2231-S.SNP.3:25563639 chr03:025563639 0 W/25563639-25563639 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.170808;DP=3716;DP4=1477,1716,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=2.41661e-06;MQSB=0;RPB=0.755267;SGB=18.096;VDB=0.119673;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.3:25563850 chr03:025563850 0 W/25563850-25563850 FN1504-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g45280 dehydrin, putative, expressed SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1318-S.SNP.3:25565284 chr03:025565284 0 W/25565284-25565284 FN1318-S Single Base Substitution C-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN453-S.SNP.3:25569810 chr03:025569810 0 W/25569810-25569810 FN453-S Single Base Substitution G-C INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN453-S.SNP.3:25569811 chr03:025569811 0 W/25569811-25569811 FN453-S Single Base Substitution C-A INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1064-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN1064-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1538-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN1538-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2130-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN2130-S SNP C -> T AC=2;AN=168;BQB=0.705638;DP=3220;DP4=1756,1399,15,20;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0;MQB=1.89455e-07;MQSB=0.352469;RPB=0.98064;SGB=-86.8983;VDB=0.218315;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P327|1066|LOC_Os03g45300|protein_coding|CODING|LOC_Os03g45300.1|1|1) FN2600-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN2600-S SNP C -> T AC=2;AN=198;BQB=0.994076;DP=4071;DP4=2010,1853,14,21;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0;MQB=2.83625e-15;MQSB=4.70464e-05;RPB=0.0484897;SGB=76.0565;VDB=0.0146099;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P327|1066|LOC_Os03g45300|protein_coding|CODING|LOC_Os03g45300.1|1|1) FN3324-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN3324-S SNP C -> T AC=2;AN=184;BQB=0.895168;DP=2701;DP4=1293,1308,8,9;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0;MQB=0.00123333;MQSB=0.48185;RPB=0.749976;SGB=49.835;VDB=0.684569;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P327|1066|LOC_Os03g45300|protein_coding|CODING|LOC_Os03g45300.1|1|1) FN3696-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN3696-S SNP C -> T AC=2;AN=190;BQB=0.746033;DP=2514;DP4=1265,1144,10,9;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0;MQB=1.11065e-06;MQSB=0.225144;RPB=0.722911;SGB=80.9724;VDB=0.0874841;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P327|1066|LOC_Os03g45300|protein_coding|CODING|LOC_Os03g45300.1|1|1) FN3896-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN3896-S SNP C -> T AC=2;AN=158;BQB=0.943049;DP=2253;DP4=1091,1069,13,8;HOB=0.024996;ICB=0.493752;MQ=42;MQ0F=0;MQB=5.19893e-08;MQSB=0.10722;RPB=0.237603;SGB=35.6659;VDB=0.569255;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P327|1066|LOC_Os03g45300|protein_coding|CODING|LOC_Os03g45300.1|1|1) FN750-S.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN750-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN_809-6-1.SNP.3:25577455 chr03:025577455 0 W/25577455-25577455 FN_809-6-1 Single Base Substitution C-T Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN1262-S.SNP.3:25588216 chr03:025588216 0 W/25588216-25588216 FN1262-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g45320 dehydrogenase, putative, expressed SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2175-S.SNP.3:25596905 chr03:025596905 0 W/25596905-25596905 FN2175-S SNP T -> C AC=1;AN=168;BQB=0.39165;DP=2236;DP4=1106,1103,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.0165021;MQSB=0.558873;RPB=0.995581;SGB=-1.53256;VDB=0.00495458;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.3:25604449 chr03:025604449 0 W/25604449-25604449 FN534-S Single Base Substitution A-T INTERGENIC HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN-189.SNP.3:25605571 chr03:025605571 0 W/25605571-25605571 FN-189 Single Base Substitution G-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2563-S.SNP.3:25608671 chr03:025608671 0 W/25608671-25608671 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.478383;DP=2763;DP4=2123,507,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.00211118;MQSB=0.000234363;RPB=0.62996;SGB=26.5745;VDB=0.634914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.3:25610973 chr03:025610973 0 W/25610973-25610973 FN1430-S Single Base Substitution G-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3886-S.SNP.3:25626413 chr03:025626413 0 W/25626413-25626413 FN3886-S SNP A -> G AC=2;AN=158;BQB=0.690377;DP=2816;DP4=1279,1352,8,14;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=1.10228e-08;MQSB=0.770607;RPB=0.824185;SGB=90.7616;VDB=0.888112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T356A|492|LOC_Os03g45390|protein_coding|CODING|LOC_Os03g45390.1|2|1) FN566-S.SNP.3:25626691 chr03:025626691 0 W/25626691-25626691 FN566-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN946-S.SNP.3:25642724 chr03:025642724 0 W/25642724-25642724 FN946-S Single Base Substitution A-T INTERGENIC HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN1497-S.SNP.3:25642881 chr03:025642881 0 W/25642881-25642881 FN1497-S Single Base Substitution C-T INTERGENIC Homo SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3507-S.SNP.3:25646755 chr03:025646755 0 W/25646755-25646755 FN3507-S SNP T -> A AC=1;AN=188;BQB=0.666688;DP=1998;DP4=997,956,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0;MQB=0.101302;MQSB=0.000169724;RPB=0.416103;SGB=53.5223;VDB=0.0082416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.3:25650034 chr03:025650034 0 W/25650034-25650034 FN3700-S SNP G -> A AC=1;AN=190;BQB=0.27466;DP=3505;DP4=1555,1780,3,16;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.00693e-05;MQSB=1.28149e-07;RPB=0.827517;SGB=10.3266;VDB=0.506728;EFF=INTRON(MODIFIER||||159|LOC_Os03g45440|protein_coding|CODING|LOC_Os03g45440.1|2|1) FN1395-S.SNP.3:25659593 chr03:025659593 0 W/25659593-25659593 FN1395-S Single Base Substitution C-T INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN2300.SNP.3:25664575 chr03:025664575 0 W/25664575-25664575 FN2300 SNP A -> T AC=1;AN=192;BQB=0.0866921;DP=3147;DP4=1247,1749,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.0251033;MQB=0.813953;MQSB=6.25396e-33;RPB=0.637306;SGB=43.3444;VDB=0.0354851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.3:25676435 chr03:025676435 0 W/25676435-25676435 FN1068-S Single Base Substitution T-C INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN499-S.SNP.3:25678678 chr03:025678678 0 W/25678678-25678678 FN499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g45500 retrotransposon protein, putative, unclassified SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1338-S.SNP.3:25680450 chr03:025680450 0 W/25680450-25680450 FN1338-S Single Base Substitution T-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1709-S.SNP.3:25680471 chr03:025680471 0 W/25680471-25680471 FN1709-S SNP C -> T AC=2;AN=188;BQB=0.932721;DP=1844;DP4=984,830,14,8;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.0103037;MQB=0.0111369;MQSB=3.60703e-15;RPB=0.563216;SGB=67.8739;VDB=0.000291035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.3:25691770 chr03:025691770 0 W/25691770-25691770 FN1056-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN-243.SNP.3:25693366 chr03:025693366 0 W/25693366-25693366 FN-243 Single Base Substitution C-T INTRON HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN3368-S.SNP.3:25718019 chr03:025718019 0 W/25718019-25718019 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.864809;DP=1426;DP4=740,600,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.000923672;MQSB=0.319496;RPB=0.99994;SGB=39.699;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.3:25720539 chr03:025720539 0 W/25720539-25720539 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.578102;DP=4969;DP4=2447,2184,6,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=3.24e-05;MQSB=0.783065;RPB=0.237342;SGB=-34.9207;VDB=0.293362;EFF=INTRON(MODIFIER||||385|LOC_Os03g45570|protein_coding|CODING|LOC_Os03g45570.1|1|1) FN418-S.SNP.3:25744736 chr03:025744736 0 W/25744736-25744736 FN418-S Single Base Substitution G-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2267-S.SNP.3:25745571 chr03:025745571 0 W/25745571-25745571 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.837262;DP=4862;DP4=2172,2329,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=3.37089e-08;MQSB=0.192581;RPB=0.998193;SGB=13.4344;VDB=0.170088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.3:25745572 chr03:025745572 0 W/25745572-25745572 FN2267-S SNP G -> T AC=1;AN=190;BQB=0.989815;DP=4852;DP4=2142,2321,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=4.55316e-10;MQSB=0.198066;RPB=0.906116;SGB=-38.5551;VDB=0.216187;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.3:25747445 chr03:025747445 0 W/25747445-25747445 FN1094-S Single Base Substitution A-G INTRON HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1466-S.SNP.3:25747445 chr03:025747445 0 W/25747445-25747445 FN1466-S Single Base Substitution A-G INTRON HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1568-S.SNP.3:25747445 chr03:025747445 0 W/25747445-25747445 FN1568-S Single Base Substitution A-G INTRON Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1717-S.SNP.3:25747445 chr03:025747445 0 W/25747445-25747445 FN1717-S SNP A -> G AC=2;AN=188;BQB=0.00289542;DP=3674;DP4=1691,1853,25,23;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=2.57435e-08;MQSB=0.204963;RPB=0.968506;SGB=-575.532;VDB=0.465346;EFF=INTRON(MODIFIER||||495|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.1|6|1),INTRON(MODIFIER||||501|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.2|6|1) FN-274.SNP.3:25753389 chr03:025753389 0 W/25753389-25753389 FN-274 Single Base Substitution C-G INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN2591-S.SNP.3:25758648 chr03:025758648 0 W/25758648-25758648 FN2591-S SNP T -> A AC=1;AN=198;BQB=0.971878;DP=4198;DP4=2229,1532,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.38803e-06;MQSB=0.546108;RPB=0.439773;SGB=22.1736;VDB=0.391945;EFF=INTRON(MODIFIER||||495|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.1|1|1),INTRON(MODIFIER||||501|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.2|1|1) FN2591-S.SNP.3:25758649 chr03:025758649 0 W/25758649-25758649 FN2591-S SNP C -> A AC=1;AN=198;BQB=0.0158828;DP=4198;DP4=2228,1762,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000168097;MQSB=0.909646;RPB=0.588721;SGB=25.7687;VDB=0.668972;EFF=INTRON(MODIFIER||||495|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.1|1|1),INTRON(MODIFIER||||501|LOC_Os03g45619|protein_coding|CODING|LOC_Os03g45619.2|1|1) FN2729-S.SNP.3:25761735 chr03:025761735 0 W/25761735-25761735 FN2729-S SNP C -> T AC=2;AN=200;BQB=0.207115;DP=4520;DP4=2459,1844,29,13;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0;MQB=2.50823e-17;MQSB=0.73599;RPB=0.776531;SGB=48.014;VDB=0.0820238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.3:25763291 chr03:025763291 0 W/25763291-25763291 FN3454-S SNP G -> T AC=1;AN=184;BQB=0.976712;DP=2748;DP4=1490,1196,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=3.88885e-06;MQSB=0.171723;RPB=0.736889;SGB=48.7425;VDB=0.188189;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S68*|216|LOC_Os03g45650|protein_coding|CODING|LOC_Os03g45650.1|1|1);LOF=(LOC_Os03g45650|LOC_Os03g45650|1|1.00);NMD=(LOC_Os03g45650|LOC_Os03g45650|1|1.00) FN-70.SNP.3:25780585 chr03:025780585 0 W/25780585-25780585 FN-70 Single Base Substitution T-C INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2272-S.SNP.3:25785394 chr03:025785394 0 W/25785394-25785394 FN2272-S SNP C -> T AC=1;AN=190;BQB=0.692198;DP=3416;DP4=2232,962,17,8;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0;MQB=0.000699848;MQSB=0.781848;RPB=0.932429;SGB=19.6499;VDB=0.00344073;EFF=INTERGENIC(MODIFIER||||||||||1) FN709-S.SNP.3:25785813 chr03:025785813 0 W/25785813-25785813 FN709-S Single Base Substitution C-G INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN1170-S.SNP.3:25799988 chr03:025799988 0 W/25799988-25799988 FN1170-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-68.SNP.3:25802356 chr03:025802356 0 W/25802356-25802356 FN-68 Single Base Substitution T-C INTRON HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2119-S.SNP.3:25808276 chr03:025808276 0 W/25808276-25808276 FN2119-S SNP C -> T AC=2;AN=168;BQB=0.6377;DP=3749;DP4=1805,1899,16,14;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.51969e-08;MQSB=0.942265;RPB=0.943212;SGB=-10.2027;VDB=0.652548;EFF=INTRON(MODIFIER||||697|LOC_Os03g45730|protein_coding|CODING|LOC_Os03g45730.1|3|1) FN1552-S.SNP.3:25808887 chr03:025808887 0 W/25808887-25808887 FN1552-S SNP A -> C AC=1;AN=188;BQB=0.000561578;DP=3813;DP4=2022,1748,19,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.43132e-07;MQSB=0.28026;RPB=0.995971;SGB=-121.349;VDB=0.378149;EFF=INTRON(MODIFIER||||697|LOC_Os03g45730|protein_coding|CODING|LOC_Os03g45730.1|1|1) FN1566-S.SNP.3:25816885 chr03:025816885 0 W/25816885-25816885 FN1566-S Single Base Substitution A-C INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3803-S.SNP.3:25817874 chr03:025817874 0 W/25817874-25817874 FN3803-S SNP T -> C AC=2;AN=190;BQB=0.997063;DP=2526;DP4=1258,1172,26,21;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0;MQB=7.31514e-16;MQSB=0.129067;RPB=0.999157;SGB=202.956;VDB=0.664753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.3:25821799 chr03:025821799 0 W/25821799-25821799 FN3691-S SNP A -> G AC=1;AN=190;BQB=0.967333;DP=2937;DP4=1491,1330,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000340484;MQB=0.0284653;MQSB=0.0263432;RPB=0.619393;SGB=39.9877;VDB=0.714609;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D213|468|LOC_Os03g45734|protein_coding|CODING|LOC_Os03g45734.1|3|1) FN2795-S.SNP.3:25827741 chr03:025827741 0 W/25827741-25827741 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.425777;DP=4025;DP4=1978,1822,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.94964e-07;MQSB=0.000649269;RPB=0.373997;SGB=95.5;VDB=0.658104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.3:25833971 chr03:025833971 0 W/25833971-25833971 FN2721-S SNP C -> A AC=1;AN=200;BQB=0.790827;DP=5096;DP4=2555,2250,14,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.64248e-11;MQSB=0.121596;RPB=0.581435;SGB=76.3213;VDB=0.599375;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.3:25849986 chr03:025849986 0 W/25849986-25849986 FN1020-S Single Base Substitution C-G INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN961-S.SNP.3:25860663 chr03:025860663 0 W/25860663-25860663 FN961-S Single Base Substitution G-A START_GAINED HET LOC_Os03g45779 expressed protein SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2348.SNP.3:25881248 chr03:025881248 0 W/25881248-25881248 FN2348 SNP G -> A AC=2;AN=192;BQB=0.728997;DP=5055;DP4=2350,2387,25,22;HOB=0.0206163;ICB=0.494846;MQ=40;MQ0F=0;MQB=1.20215e-17;MQSB=0.769334;RPB=0.324072;SGB=105.844;VDB=0.218552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.3:25888375 chr03:025888375 0 W/25888375-25888375 FN2454 SNP T -> A AC=1;AN=200;BQB=0.190394;DP=3059;DP4=1508,1353,4,6;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.00915332;MQB=0.999913;MQSB=0.0343988;RPB=0.701378;SGB=11.2488;VDB=0.28539;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.3:25893631 chr03:025893631 0 W/25893631-25893631 FN-232 Single Base Substitution G-A INTRON HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1290-S.SNP.3:25899822 chr03:025899822 0 W/25899822-25899822 FN1290-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN851-S.SNP.3:25902879 chr03:025902879 0 W/25902879-25902879 FN851-S Single Base Substitution C-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3388-S.SNP.3:25906573 chr03:025906573 0 W/25906573-25906573 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.937625;DP=3546;DP4=1287,2137,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.19135e-06;MQSB=0.0194911;RPB=0.304702;SGB=28.3187;VDB=0.124943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1730-S.SNP.3:25913411 chr03:025913411 0 W/25913411-25913411 FN1730-S SNP T -> C AC=1;AN=188;BQB=0.445145;DP=2955;DP4=1223,1702,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.00267785;MQSB=0.999804;RPB=0.991399;SGB=-79.0704;VDB=0.488396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.3:25915777 chr03:025915777 0 W/25915777-25915777 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.640134;DP=3549;DP4=1661,1695,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000578985;MQSB=0.0110845;RPB=0.190389;SGB=-16.2794;VDB=0.362725;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.3:25933139 chr03:025933139 0 W/25933139-25933139 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1668-S.SNP.3:25939135 chr03:025939135 0 W/25939135-25939135 FN1668-S SNP C -> G AC=1;AN=188;BQB=0.990692;DP=1721;DP4=560,1119,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0;MQB=0.0549597;MQSB=3.04644e-07;RPB=0.119685;SGB=32.441;VDB=0.00922014;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.3:25941982 chr03:025941982 0 W/25941982-25941982 FN4151-S SNP G -> T AC=1;AN=170;BQB=0.975297;DP=2355;DP4=1360,892,16,2;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0;MQB=0.0652988;MQSB=0.262347;RPB=0.594759;SGB=74.528;VDB=0.314481;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.3:25948172 chr03:025948172 0 W/25948172-25948172 FN671-S Single Base Substitution C-T INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3543-S.SNP.3:25948304 chr03:025948304 0 W/25948304-25948304 FN3543-S SNP T -> A AC=1;AN=188;BQB=0.96903;DP=2899;DP4=1247,1586,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.82555e-06;MQSB=0.906618;RPB=0.878318;SGB=35.3493;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.3:25948898 chr03:025948898 0 W/25948898-25948898 FN485-S Single Base Substitution G-A INTERGENIC HOMO SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1482-S.SNP.3:25951403 chr03:025951403 0 W/25951403-25951403 FN1482-S Single Base Substitution T-C INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1380-S.SNP.3:25976828 chr03:025976828 0 W/25976828-25976828 FN1380-S Single Base Substitution C-T INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1184-S.SNP.3:25979849 chr03:025979849 0 W/25979849-25979849 FN1184-S Single Base Substitution G-A INTRON HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1102-S.SNP.3:25981579 chr03:025981579 0 W/25981579-25981579 FN1102-S Single Base Substitution G-A INTRON HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1665-S.SNP.3:25981579 chr03:025981579 0 W/25981579-25981579 FN1665-S Single Base Substitution G-A INTRON Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN464-S.SNP.3:25981579 chr03:025981579 0 W/25981579-25981579 FN464-S Single Base Substitution G-A INTRON HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN503-S.SNP.3:25981579 chr03:025981579 0 W/25981579-25981579 FN503-S Single Base Substitution G-A INTRON HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN1434-S.SNP.3:25981896 chr03:025981896 0 W/25981896-25981896 FN1434-S Single Base Substitution G-A INTRON HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1434-S.SNP.3:25981897 chr03:025981897 0 W/25981897-25981897 FN1434-S Single Base Substitution A-C INTRON HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN_N1-169-1.SNP.3:25991394 chr03:025991394 0 W/25991394-25991394 FN_N1-169-1 Single Base Substitution G-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1585-S.SNP.3:26000290 chr03:026000290 0 W/26000290-26000290 FN1585-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3354-S.SNP.3:26004863 chr03:026004863 0 W/26004863-26004863 FN3354-S SNP T -> C AC=1;AN=184;BQB=0.981226;DP=2699;DP4=1203,1401,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.44309e-10;MQSB=0.972271;RPB=0.855281;SGB=6.80232;VDB=0.0561426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.3:26008623 chr03:026008623 0 W/26008623-26008623 FN3709-S SNP A -> T AC=1;AN=190;BQB=0.900046;DP=2619;DP4=1316,1178,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.79512e-08;MQSB=0.669863;RPB=0.646299;SGB=58.2031;VDB=0.238072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.3:26012146 chr03:026012146 0 W/26012146-26012146 FN1109-S Single Base Substitution C-G INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2496.SNP.3:26026966 chr03:026026966 0 W/26026966-26026966 FN2496 SNP G -> A AC=2;AN=200;BQB=0.107823;DP=4505;DP4=2139,2070,12,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.32159e-08;MQSB=0.858996;RPB=0.987051;SGB=-11.8999;VDB=0.518611;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.3:26035784 chr03:026035784 0 W/26035784-26035784 FN_814-7-1 Single Base Substitution C-G Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1455-S.SNP.3:26047137 chr03:026047137 0 W/26047137-26047137 FN1455-S Single Base Substitution T-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2686-S.SNP.3:26054340 chr03:026054340 0 W/26054340-26054340 FN2686-S SNP A -> G AC=1;AN=200;BQB=0.998334;DP=4936;DP4=2441,2248,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27163e-12;MQSB=0.982518;RPB=0.998931;SGB=14.3054;VDB=0.72859;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.3:26055888 chr03:026055888 0 W/26055888-26055888 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3883-S.SNP.3:26056324 chr03:026056324 0 W/26056324-26056324 FN3883-S SNP G -> A AC=1;AN=158;BQB=0.81511;DP=2659;DP4=1184,1336,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.27077e-07;MQSB=0.967543;RPB=0.381175;SGB=47.0672;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.3:26056697 chr03:026056697 0 W/26056697-26056697 FN3940-S SNP T -> G AC=2;AN=158;BQB=0.66302;DP=2328;DP4=1060,1158,16,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.97031e-13;MQSB=0.807988;RPB=0.255437;SGB=121.348;VDB=0.649394;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.3:26057055 chr03:026057055 0 W/26057055-26057055 FN-305 Single Base Substitution A-G INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3606-S.SNP.3:26057336 chr03:026057336 0 W/26057336-26057336 FN3606-S SNP C -> T AC=2;AN=190;BQB=0.48673;DP=1955;DP4=306,1529,3,20;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.0167e-08;MQSB=5.39398e-13;RPB=0.631542;SGB=99.1879;VDB=0.479609;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.3:26064342 chr03:026064342 0 W/26064342-26064342 FN2673-S SNP A -> T AC=1;AN=200;BQB=0.443265;DP=4416;DP4=1994,2005,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.75225e-13;MQSB=0.915865;RPB=0.401459;SGB=22.3313;VDB=0.888133;EFF=UTR_5_PRIME(MODIFIER||684||592|LOC_Os03g46090|protein_coding|CODING|LOC_Os03g46090.1|1|1),UTR_5_PRIME(MODIFIER||684||291|LOC_Os03g46090|protein_coding|CODING|LOC_Os03g46090.2|1|1) FN355-S.SNP.3:26068768 chr03:026068768 0 W/26068768-26068768 FN355-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN1134-S.SNP.3:26073673 chr03:026073673 0 W/26073673-26073673 FN1134-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2652-S.SNP.3:26074698 chr03:026074698 0 W/26074698-26074698 FN2652-S SNP A -> C AC=2;AN=200;BQB=0.861846;DP=4585;DP4=2135,2184,22,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.62944e-36;MQSB=0.738059;RPB=0.292749;SGB=275.313;VDB=0.254593;EFF=INTRON(MODIFIER||||228|LOC_Os03g46110|protein_coding|CODING|LOC_Os03g46110.1|1|1) FN-123.SNP.3:26078416 chr03:026078416 0 W/26078416-26078416 FN-123 Single Base Substitution C-A INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1123-S.SNP.3:26080869 chr03:026080869 0 W/26080869-26080869 FN1123-S Single Base Substitution A-T INTRON HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2118-S.SNP.3:26082153 chr03:026082153 0 W/26082153-26082153 FN2118-S SNP G -> T AC=1;AN=168;BQB=0.807723;DP=4001;DP4=2149,1804,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.59397e-07;MQSB=2.80644e-08;RPB=0.770086;SGB=7.05233;VDB=0.384572;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.3:26083872 chr03:026083872 0 W/26083872-26083872 FN4202-S SNP A -> G AC=1;AN=170;BQB=0.924615;DP=2401;DP4=1156,1174,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.18869e-07;MQSB=0.904382;RPB=0.992713;SGB=43.4296;VDB=0.786011;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D106|122|LOC_Os03g46130|protein_coding|CODING|LOC_Os03g46130.1|1|1) FN885-S.SNP.3:26091609 chr03:026091609 0 W/26091609-26091609 FN885-S Single Base Substitution A-C INTRON HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN2473.SNP.3:26092038 chr03:026092038 0 W/26092038-26092038 FN2473 SNP C -> T AC=2;AN=200;BQB=0.907504;DP=4487;DP4=2280,1952,9,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.96351e-13;MQSB=0.841684;RPB=0.674011;SGB=79.9264;VDB=0.680441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V47I|181|LOC_Os03g46134|protein_coding|CODING|LOC_Os03g46134.1|1|1) FN2589-S.SNP.3:26097824 chr03:026097824 0 W/26097824-26097824 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.939309;DP=4272;DP4=1933,2130,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.74733e-10;MQSB=0.999577;RPB=0.401964;SGB=77.1196;VDB=0.264368;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.3:26103460 chr03:026103460 0 W/26103460-26103460 FN525-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os03g46170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-195.SNP.3:26107438 chr03:026107438 0 W/26107438-26107438 FN-195 Single Base Substitution A-T INTRON HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN337-S.SNP.3:26108759 chr03:026108759 0 W/26108759-26108759 FN337-S Single Base Substitution G-C INTRON HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN1458-S.SNP.3:26112283 chr03:026112283 0 W/26112283-26112283 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3541-S.SNP.3:26117496 chr03:026117496 0 W/26117496-26117496 FN3541-S SNP G -> A AC=1;AN=188;BQB=0.978195;DP=2781;DP4=1366,1351,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.3766e-06;MQSB=0.998678;RPB=0.99057;SGB=35.3493;VDB=0.835774;EFF=INTRON(MODIFIER||||375|LOC_Os03g46190|protein_coding|CODING|LOC_Os03g46190.2|3|1) FN3416-S.SNP.3:26117638 chr03:026117638 0 W/26117638-26117638 FN3416-S SNP C -> G AC=1;AN=184;BQB=0.986738;DP=2767;DP4=1224,1452,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.2767e-07;MQSB=0.825824;RPB=0.970698;SGB=39.699;VDB=0.937763;EFF=UTR_3_PRIME(MODIFIER||182||375|LOC_Os03g46190|protein_coding|CODING|LOC_Os03g46190.1|3|1),INTRON(MODIFIER||||375|LOC_Os03g46190|protein_coding|CODING|LOC_Os03g46190.2|3|1) FN1698-S.SNP.3:26127923 chr03:026127923 0 W/26127923-26127923 FN1698-S SNP G -> A AC=1;AN=188;BQB=0.89479;DP=1319;DP4=686,591,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.107657;MQB=0.624409;MQSB=0;RPB=0.975848;SGB=21.8113;VDB=0.300288;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.3:26133635 chr03:026133635 0 W/26133635-26133635 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.929265;DP=4590;DP4=1954,2470,16,15;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.182789;MQB=0.0911855;MQSB=0;RPB=0.304799;SGB=99.7635;VDB=0.974414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S1769F|1890|LOC_Os03g46220|protein_coding|CODING|LOC_Os03g46220.1|3|1) FN1184-S.SNP.3:26134180 chr03:026134180 0 W/26134180-26134180 FN1184-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN-314.SNP.3:26138862 chr03:026138862 0 W/26138862-26138862 FN-314 Single Base Substitution C-T INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1028-S.SNP.3:26149441 chr03:026149441 0 W/26149441-26149441 FN1028-S Single Base Substitution T-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1329-S.SNP.3:26159561 chr03:026159561 0 W/26159561-26159561 FN1329-S Single Base Substitution C-T INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2372.SNP.3:26160615 chr03:026160615 0 W/26160615-26160615 FN2372 SNP C -> T AC=1;AN=192;BQB=0.7442;DP=4375;DP4=2321,1748,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.46659e-19;MQSB=0.919819;RPB=0.970286;SGB=72.5078;VDB=0.657257;EFF=INTERGENIC(MODIFIER||||||||||1) FN987-S.SNP.3:26163404 chr03:026163404 0 W/26163404-26163404 FN987-S Single Base Substitution G-A INTERGENIC HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN3596-S.SNP.3:26165478 chr03:026165478 0 W/26165478-26165478 FN3596-S SNP C -> A AC=1;AN=188;BQB=0.818087;DP=2508;DP4=1206,1227,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.12873e-10;MQSB=0.966099;RPB=0.539812;SGB=80.782;VDB=0.866645;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.3:26166317 chr03:026166317 0 W/26166317-26166317 FN631-S Single Base Substitution A-C INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2095-S.SNP.3:26167760 chr03:026167760 0 W/26167760-26167760 FN2095-S SNP T -> C AC=2;AN=168;BQB=0.380437;DP=4329;DP4=2245,2015,23,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.69923e-23;MQSB=0.990279;RPB=0.570578;SGB=-167.43;VDB=0.54648;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.3:26167839 chr03:026167839 0 W/26167839-26167839 W7-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2362.SNP.3:26174925 chr03:026174925 0 W/26174925-26174925 FN2362 SNP G -> A AC=1;AN=192;BQB=0.897398;DP=4910;DP4=2258,2331,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.99002e-09;MQSB=0.502516;RPB=0.221791;SGB=28.9139;VDB=0.12167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.3:26176245 chr03:026176245 0 W/26176245-26176245 FN1028-S Single Base Substitution T-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN672-S.SNP.3:26178145 chr03:026178145 0 W/26178145-26178145 FN672-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g46280 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN690-S.SNP.3:26182210 chr03:026182210 0 W/26182210-26182210 FN690-S Single Base Substitution G-A INTERGENIC HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN687-S.SNP.3:26187735 chr03:026187735 0 W/26187735-26187735 FN687-S Single Base Substitution T-C INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN404-S.SNP.3:26187772 chr03:026187772 0 W/26187772-26187772 FN404-S Single Base Substitution A-G INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3885-S.SNP.3:26188478 chr03:026188478 0 W/26188478-26188478 FN3885-S SNP A -> C AC=1;AN=158;BQB=0.987385;DP=2595;DP4=1213,1272,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.11192e-09;MQSB=0.982832;RPB=0.997954;SGB=47.5512;VDB=0.970281;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.3:26196602 chr03:026196602 0 W/26196602-26196602 FN820-S Single Base Substitution G-A INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN-89.SNP.3:26204470 chr03:026204470 0 W/26204470-26204470 FN-89 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g46330 pattern formation protein EMB30, putative, expressed SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-274.SNP.3:26209529 chr03:026209529 0 W/26209529-26209529 FN-274 Single Base Substitution C-T INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3396-S.SNP.3:26225010 chr03:026225010 0 W/26225010-26225010 FN3396-S SNP C -> G AC=1;AN=184;BQB=0.993528;DP=3418;DP4=1652,1688,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85572e-06;MQSB=0.470793;RPB=0.733867;SGB=53.2642;VDB=0.500601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.3:26229065 chr03:026229065 0 W/26229065-26229065 FN3345-S SNP C -> A AC=1;AN=184;BQB=0.946285;DP=2630;DP4=1379,1142,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000760456;MQB=3.43699e-09;MQSB=0.708835;RPB=0.921727;SGB=84.9167;VDB=0.0707707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.3:26229090 chr03:026229090 0 W/26229090-26229090 FN1763-S SNP C -> G AC=2;AN=188;BQB=0.973251;DP=2616;DP4=1402,1159,14,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000382263;MQB=1.90781e-09;MQSB=0.864765;RPB=0.878475;SGB=25.601;VDB=0.170302;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.3:26232829 chr03:026232829 0 W/26232829-26232829 FN996-S Single Base Substitution G-A INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3725-S.SNP.3:26235074 chr03:026235074 0 W/26235074-26235074 FN3725-S SNP C -> G AC=1;AN=190;BQB=0.974244;DP=2864;DP4=1302,1468,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.47965e-06;MQSB=0.992548;RPB=0.586654;SGB=35.4339;VDB=0.590673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Ggt|R30G|203|LOC_Os03g46390|protein_coding|CODING|LOC_Os03g46390.1|2|1) FN1079-S.SNP.3:26239421 chr03:026239421 0 W/26239421-26239421 FN1079-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1268-S.SNP.3:26262907 chr03:026262907 0 W/26262907-26262907 FN1268-S Single Base Substitution C-A INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN828-S.SNP.3:26262907 chr03:026262907 0 W/26262907-26262907 FN828-S Single Base Substitution C-A INTRON HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN544-S.SNP.3:26263443 chr03:026263443 0 W/26263443-26263443 FN544-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN1204-S.SNP.3:26265224 chr03:026265224 0 W/26265224-26265224 FN1204-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g46440 BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2325.SNP.3:26270654 chr03:026270654 0 W/26270654-26270654 FN2325 SNP C -> T AC=1;AN=192;BQB=0.770799;DP=5316;DP4=2263,2797,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2437e-07;MQSB=0.96265;RPB=0.983954;SGB=58.3392;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.3:26280038 chr03:026280038 0 W/26280038-26280038 FN503-S Single Base Substitution T-C INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN869-S.SNP.3:26296480 chr03:026296480 0 W/26296480-26296480 FN869-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g46480 ranBP1 domain containing protein, expressed SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-156.SNP.3:26301818 chr03:026301818 0 W/26301818-26301818 FN-156 Single Base Substitution A-T INTERGENIC HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN579-S.SNP.3:26301883 chr03:026301883 0 W/26301883-26301883 FN579-S Single Base Substitution G-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN579-S.SNP.3:26301884 chr03:026301884 0 W/26301884-26301884 FN579-S Single Base Substitution C-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2301.SNP.3:26306732 chr03:026306732 0 W/26306732-26306732 FN2301 SNP G -> C AC=2;AN=192;BQB=0.393231;DP=3153;DP4=1469,1157,7,10;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.000317158;MQB=0.000321839;MQSB=7.74749e-13;RPB=0.91536;SGB=7.3548;VDB=0.494797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.3:26308354 chr03:026308354 0 W/26308354-26308354 FN3798-S SNP C -> T AC=2;AN=190;BQB=0.699223;DP=2518;DP4=1208,1123,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.04685e-10;MQSB=0.999992;RPB=0.797175;SGB=103.742;VDB=0.0919811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.3:26309962 chr03:026309962 0 W/26309962-26309962 FN3631-S SNP G -> A AC=2;AN=190;BQB=0.254485;DP=3013;DP4=1637,1215,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.07631e-08;MQSB=0.844756;RPB=0.70963;SGB=82.301;VDB=0.0253788;EFF=INTRON(MODIFIER||||82|LOC_Os03g46490|protein_coding|CODING|LOC_Os03g46490.1|1|1) FN2339.SNP.3:26316262 chr03:026316262 0 W/26316262-26316262 FN2339 SNP G -> A AC=1;AN=192;BQB=0.530771;DP=4757;DP4=2439,1984,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.98991e-09;MQSB=0.789295;RPB=0.992159;SGB=39.1713;VDB=0.684121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.3:26316262 chr03:026316262 0 W/26316262-26316262 FN3766-S SNP G -> A AC=2;AN=190;BQB=0.987829;DP=2998;DP4=1560,1340,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.32958e-14;MQSB=0.823122;RPB=0.717084;SGB=108.296;VDB=0.0323189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.3:26324003 chr03:026324003 0 W/26324003-26324003 FN3808-S SNP C -> T AC=1;AN=190;BQB=0.552316;DP=2403;DP4=1043,1270,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69154e-07;MQSB=0.998579;RPB=0.997238;SGB=23.6597;VDB=0.766108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.3:26326096 chr03:026326096 0 W/26326096-26326096 FN-246 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN318-S.SNP.3:26326463 chr03:026326463 0 W/26326463-26326463 FN318-S Single Base Substitution C-G INTRON HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3854-S.SNP.3:26327217 chr03:026327217 0 W/26327217-26327217 FN3854-S SNP A -> C AC=1;AN=158;BQB=0.995777;DP=2221;DP4=926,1187,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.14335e-06;MQSB=0.998126;RPB=0.435459;SGB=47.0672;VDB=0.254982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E429D|535|LOC_Os03g46530|protein_coding|CODING|LOC_Os03g46530.1|4|1) FN-248.SNP.3:26339321 chr03:026339321 0 W/26339321-26339321 FN-248 Single Base Substitution T-G INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3534-S.SNP.3:26339321 chr03:026339321 0 W/26339321-26339321 FN3534-S SNP T -> G AC=2;AN=188;BQB=0.998846;DP=2903;DP4=1379,1334,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.02901e-11;MQSB=0.999402;RPB=0.999942;SGB=60.7873;VDB=0.934346;EFF=INTRON(MODIFIER||||956|LOC_Os03g46550|protein_coding|CODING|LOC_Os03g46550.1|1|1) FN3803-S.SNP.3:26339321 chr03:026339321 0 W/26339321-26339321 FN3803-S SNP T -> G AC=2;AN=190;BQB=0.767215;DP=2993;DP4=1447,1233,27,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.68198e-31;MQSB=0.993371;RPB=0.678123;SGB=203.28;VDB=0.0310894;EFF=INTRON(MODIFIER||||956|LOC_Os03g46550|protein_coding|CODING|LOC_Os03g46550.1|1|1) FN2085-S.SNP.3:26340305 chr03:026340305 0 W/26340305-26340305 FN2085-S SNP G -> A AC=1;AN=168;BQB=0.901318;DP=3757;DP4=1819,1897,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.12105e-11;MQSB=0.994992;RPB=0.262462;SGB=-12.3568;VDB=0.646769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G589D|956|LOC_Os03g46550|protein_coding|CODING|LOC_Os03g46550.1|2|1) FN2395.SNP.3:26342884 chr03:026342884 0 W/26342884-26342884 FN2395 SNP C -> T AC=1;AN=200;BQB=0.313811;DP=4509;DP4=2378,1943,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.3385e-08;MQSB=0.940607;RPB=0.909585;SGB=33.0593;VDB=0.369891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.3:26345895 chr03:026345895 0 W/26345895-26345895 FN2188-S SNP C -> T AC=2;AN=190;BQB=0.144121;DP=4830;DP4=2291,2193,29,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.78248e-32;MQSB=0.89256;RPB=0.969952;SGB=267.681;VDB=0.23507;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D304|456|LOC_Os03g46560|protein_coding|CODING|LOC_Os03g46560.1|2|1) FN-402.SNP.3:26352683 chr03:026352683 0 W/26352683-26352683 FN-402 Single Base Substitution T-C INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN-120.SNP.3:26358160 chr03:026358160 0 W/26358160-26358160 FN-120 Single Base Substitution A-G INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2308.SNP.3:26358561 chr03:026358561 0 W/26358561-26358561 FN2308 SNP A -> T AC=2;AN=192;BQB=0.639209;DP=4970;DP4=2668,2033,26,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.97088e-22;MQSB=0.729213;RPB=0.999554;SGB=121.76;VDB=0.150351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.3:26360435 chr03:026360435 0 W/26360435-26360435 FN2246-S SNP T -> C AC=2;AN=190;BQB=0.934272;DP=4853;DP4=2357,2126,26,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.40465e-23;MQSB=0.311134;RPB=0.65889;SGB=102.83;VDB=0.0523868;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.3:26361792 chr03:026361792 0 W/26361792-26361792 FN1330-S Single Base Substitution A-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN4141-S.SNP.3:26369821 chr03:026369821 0 W/26369821-26369821 FN4141-S SNP T -> C AC=2;AN=170;BQB=0.986405;DP=2401;DP4=1082,1212,12,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.95741e-13;MQSB=0.314706;RPB=0.202143;SGB=65.8619;VDB=0.746641;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.3:26371060 chr03:026371060 0 W/26371060-26371060 FN679-S Single Base Substitution A-T INTERGENIC HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3382-S.SNP.3:26371407 chr03:026371407 0 W/26371407-26371407 FN3382-S SNP G -> C AC=1;AN=184;BQB=0.971096;DP=2911;DP4=1345,1508,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00515287;MQB=0.00100725;MQSB=0.685384;RPB=0.992226;SGB=25.1826;VDB=0.450065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G100R|1037|LOC_Os03g46590|protein_coding|CODING|LOC_Os03g46590.1|1|1) FN-160.SNP.3:26374899 chr03:026374899 0 W/26374899-26374899 FN-160 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g46590 transposon protein, putative, unclassified, expressed SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2190-S.SNP.3:26376320 chr03:026376320 0 W/26376320-26376320 FN2190-S SNP C -> T AC=1;AN=190;BQB=0.998472;DP=4894;DP4=2505,2027,14,23;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00122599;MQB=5.02152e-09;MQSB=1.02582e-09;RPB=0.764665;SGB=162.942;VDB=0.648798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.3:26382394 chr03:026382394 0 W/26382394-26382394 FN3814-S SNP T -> G AC=1;AN=190;BQB=0.98324;DP=2565;DP4=1201,1274,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07886e-09;MQSB=0.983028;RPB=0.80601;SGB=39.6545;VDB=0.359018;EFF=INTRON(MODIFIER||||472|LOC_Os03g46610|protein_coding|CODING|LOC_Os03g46610.1|8|1),INTRON(MODIFIER||||468|LOC_Os03g46610|protein_coding|CODING|LOC_Os03g46610.2|8|1) FN4258-S.SNP.3:26393040 chr03:026393040 0 W/26393040-26393040 FN4258-S SNP T -> C AC=1;AN=170;BQB=0.952172;DP=2647;DP4=1325,1237,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0324896;MQB=0.853889;MQSB=2.23524e-13;RPB=0.600415;SGB=21.1076;VDB=0.428039;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H375R|504|LOC_Os03g46630|protein_coding|CODING|LOC_Os03g46630.1|4|1) FN2625-S.SNP.3:26402501 chr03:026402501 0 W/26402501-26402501 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.794359;DP=4891;DP4=2583,2001,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13647e-15;MQSB=0.985554;RPB=0.908334;SGB=114.132;VDB=0.39415;EFF=INTRON(MODIFIER||||380|LOC_Os03g46650|protein_coding|CODING|LOC_Os03g46650.1|2|1) FN-171.SNP.3:26404708 chr03:026404708 0 W/26404708-26404708 FN-171 Single Base Substitution G-A INTRON HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2271-S.SNP.3:26404887 chr03:026404887 0 W/26404887-26404887 FN2271-S SNP A -> G AC=1;AN=190;BQB=0.955353;DP=5025;DP4=2430,2251,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49447e-14;MQSB=0.98245;RPB=0.261121;SGB=112.85;VDB=0.118939;EFF=INTRON(MODIFIER||||380|LOC_Os03g46650|protein_coding|CODING|LOC_Os03g46650.1|2|1) FN1541-S.SNP.3:26407093 chr03:026407093 0 W/26407093-26407093 FN1541-S Single Base Substitution G-A INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2375.SNP.3:26408862 chr03:026408862 0 W/26408862-26408862 FN2375 SNP C -> A AC=2;AN=192;BQB=0.755933;DP=4800;DP4=2225,2199,11,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000208333;MQB=5.4023e-15;MQSB=0.30649;RPB=0.989251;SGB=62.2505;VDB=0.137854;EFF=INTRON(MODIFIER||||518|LOC_Os03g46660|protein_coding|CODING|LOC_Os03g46660.1|2|1) FN1499-S.SNP.3:26413680 chr03:026413680 0 W/26413680-26413680 FN1499-S Single Base Substitution A-T INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN996-S.SNP.3:26417267 chr03:026417267 0 W/26417267-26417267 FN996-S Single Base Substitution G-A INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3790-S.SNP.3:26428418 chr03:026428418 0 W/26428418-26428418 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.939677;DP=2752;DP4=1285,1382,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03608e-07;MQSB=0.291603;RPB=0.752195;SGB=62.7569;VDB=0.779077;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.3:26434709 chr03:026434709 0 W/26434709-26434709 FN903-S Single Base Substitution T-A INTRON HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1631-S.SNP.3:26435826 chr03:026435826 0 W/26435826-26435826 FN1631-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g46710 expressed protein SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN782-S.SNP.3:26436889 chr03:026436889 0 W/26436889-26436889 FN782-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN-345.SNP.3:26439197 chr03:026439197 0 W/26439197-26439197 FN-345 Single Base Substitution T-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3826-S.SNP.3:26452056 chr03:026452056 0 W/26452056-26452056 FN3826-S SNP G -> A AC=1;AN=190;BQB=0.946392;DP=2819;DP4=1458,1218,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.32967e-09;MQSB=0.92445;RPB=0.667809;SGB=46.7622;VDB=0.485546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.3:26452293 chr03:026452293 0 W/26452293-26452293 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.372436;DP=2383;DP4=919,1434,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19408e-07;MQSB=0.988051;RPB=0.991298;SGB=3.99491;VDB=0.668109;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T154I|187|LOC_Os03g46760|protein_coding|CODING|LOC_Os03g46760.1|2|1) FN3687-S.SNP.3:26452487 chr03:026452487 0 W/26452487-26452487 FN3687-S SNP G -> A AC=1;AN=190;BQB=0.927115;DP=2774;DP4=1148,1529,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.50425e-08;MQSB=0.962458;RPB=0.961747;SGB=49.0954;VDB=0.881738;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T89|187|LOC_Os03g46760|protein_coding|CODING|LOC_Os03g46760.1|2|1) FN3396-S.SNP.3:26453196 chr03:026453196 0 W/26453196-26453196 FN3396-S SNP T -> A AC=2;AN=184;BQB=0.945262;DP=3980;DP4=1760,1980,28,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.18211e-32;MQSB=0.940821;RPB=0.777147;SGB=225.092;VDB=0.823501;EFF=INTRON(MODIFIER||||187|LOC_Os03g46760|protein_coding|CODING|LOC_Os03g46760.1|1|1) FN3396-S.SNP.3:26453197 chr03:026453197 0 W/26453197-26453197 FN3396-S SNP G -> C AC=2;AN=184;BQB=0.875503;DP=3965;DP4=1819,2017,27,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.72789e-32;MQSB=0.895573;RPB=0.764753;SGB=225.092;VDB=0.747975;EFF=INTRON(MODIFIER||||187|LOC_Os03g46760|protein_coding|CODING|LOC_Os03g46760.1|1|1) FN3396-S.SNP.3:26455471 chr03:026455471 0 W/26455471-26455471 FN3396-S SNP C -> A AC=2;AN=184;BQB=0.506817;DP=2937;DP4=1355,1478,16,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000340484;MQB=9.50445e-14;MQSB=0.310205;RPB=0.994233;SGB=28.1074;VDB=0.999683;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.3:26456284 chr03:026456284 0 W/26456284-26456284 FN536-S Single Base Substitution T-A INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN3287-S.SNP.3:26459391 chr03:026459391 0 W/26459391-26459391 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.921562;DP=2697;DP4=1328,1262,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.85514e-09;MQSB=0.972716;RPB=0.23326;SGB=57.786;VDB=0.633742;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.3:26468015 chr03:026468015 0 W/26468015-26468015 FN2620-S SNP T -> A AC=1;AN=198;BQB=0.623038;DP=4013;DP4=1929,1873,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.34239e-09;MQSB=0.564596;RPB=0.999537;SGB=72.5245;VDB=0.12577;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.3:26478365 chr03:026478365 0 W/26478365-26478365 W463-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. W246-5-1.SNP.3:26478962 chr03:026478962 0 W/26478962-26478962 W246-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1184-S.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN1184-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1295-S.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN1295-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1570-S.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN1570-S Single Base Substitution T-G INTERGENIC Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2379.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN2379 SNP T -> G AC=2;AN=192;BQB=0.456966;DP=4907;DP4=2298,2147,37,46;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=0;MQSB=0.89277;RPB=0.999993;SGB=275.615;VDB=0.0972995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN2602-S SNP T -> G AC=1;AN=198;BQB=0.821964;DP=4106;DP4=1950,1859,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06498e-08;MQSB=0.957658;RPB=0.969963;SGB=54.5295;VDB=0.0906401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.3:26484048 chr03:026484048 0 W/26484048-26484048 FN3487-S SNP T -> G AC=1;AN=184;BQB=0.504638;DP=2718;DP4=1278,1375,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16035e-06;MQSB=0.953676;RPB=0.211525;SGB=53.2642;VDB=0.624468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.3:26498178 chr03:026498178 0 W/26498178-26498178 FN1307-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1173-S.SNP.3:26508699 chr03:026508699 0 W/26508699-26508699 FN1173-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN680-S.SNP.3:26509422 chr03:026509422 0 W/26509422-26509422 FN680-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g46860 helix-loop-helix DNA-binding protein, putative, expressed SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1338-S.SNP.3:26511889 chr03:026511889 0 W/26511889-26511889 FN1338-S Single Base Substitution G-T INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1677-S.SNP.3:26515208 chr03:026515208 0 W/26515208-26515208 FN1677-S SNP A -> T AC=2;AN=188;BQB=0.959638;DP=3666;DP4=2030,1600,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.94777e-18;MQSB=0.987316;RPB=0.948611;SGB=85.5904;VDB=0.327838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1677-S.SNP.3:26515209 chr03:026515209 0 W/26515209-26515209 FN1677-S SNP A -> T AC=2;AN=188;BQB=0.9988;DP=3648;DP4=2028,1584,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.88245e-16;MQSB=0.98929;RPB=0.990913;SGB=56.5957;VDB=0.303033;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.3:26527978 chr03:026527978 0 W/26527978-26527978 FN756-S Single Base Substitution A-G INTRON HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN986-S.SNP.3:26541139 chr03:026541139 0 W/26541139-26541139 FN986-S Single Base Substitution A-G INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN4124-S.SNP.3:26541590 chr03:026541590 0 W/26541590-26541590 FN4124-S SNP A -> T AC=2;AN=182;BQB=0.591034;DP=2903;DP4=1408,1414,17,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.01852e-19;MQSB=0.944742;RPB=0.955308;SGB=161.394;VDB=0.811282;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.3:26566440 chr03:026566440 0 W/26566440-26566440 FN_798-4-2 Single Base Substitution G-T Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN1268-S.SNP.3:26582747 chr03:026582747 0 W/26582747-26582747 FN1268-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN4206-S.SNP.3:26590487 chr03:026590487 0 W/26590487-26590487 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.672584;DP=2233;DP4=1122,1033,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000447828;MQB=6.33976e-08;MQSB=0.990453;RPB=0.795793;SGB=24.7692;VDB=0.912922;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.3:26595825 chr03:026595825 0 W/26595825-26595825 FN4139-S SNP C -> T AC=1;AN=170;BQB=0.848867;DP=2311;DP4=1176,1071,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.1337e-08;MQSB=0.99366;RPB=0.999106;SGB=56.7575;VDB=0.859771;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.3:26596297 chr03:026596297 0 W/26596297-26596297 W466-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2282.SNP.3:26599301 chr03:026599301 0 W/26599301-26599301 FN2282 SNP A -> G AC=1;AN=192;BQB=0.370206;DP=4987;DP4=2491,2209,22,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200521;MQB=5.77471e-19;MQSB=0.927915;RPB=0.302241;SGB=154.19;VDB=0.760297;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.3:26600540 chr03:026600540 0 W/26600540-26600540 FN4151-S SNP T -> A AC=1;AN=170;BQB=0.960075;DP=2257;DP4=1009,1181,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000443066;MQB=1.08707e-08;MQSB=0.995939;RPB=0.995964;SGB=61.2001;VDB=0.711069;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.3:26620003 chr03:026620003 0 W/26620003-26620003 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.503402;DP=3017;DP4=1524,1314,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.000101571;MQSB=1.32157e-08;RPB=0.979146;SGB=0.716704;VDB=0.606423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.3:26622174 chr03:026622174 0 W/26622174-26622174 FN2774-S SNP C -> G AC=1;AN=198;BQB=0.492246;DP=4103;DP4=1863,2028,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68877e-08;MQSB=0.914882;RPB=0.826394;SGB=18.9639;VDB=0.81207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.3:26623770 chr03:026623770 0 W/26623770-26623770 FN1426-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1695-S.SNP.3:26624724 chr03:026624724 0 W/26624724-26624724 FN1695-S SNP A -> T AC=1;AN=188;BQB=0.998193;DP=3913;DP4=1969,1905,3,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11903e-08;MQSB=0.883777;RPB=0.487956;SGB=28.6195;VDB=0.396728;EFF=INTRON(MODIFIER||||480|LOC_Os03g47070|protein_coding|CODING|LOC_Os03g47070.1|3|1),INTRON(MODIFIER||||388|LOC_Os03g47070|protein_coding|CODING|LOC_Os03g47070.2|2|1) FN2339.SNP.3:26625223 chr03:026625223 0 W/26625223-26625223 FN2339 SNP G -> A AC=1;AN=192;BQB=0.920038;DP=4967;DP4=2367,2294,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.7746e-18;MQSB=0.99707;RPB=0.817129;SGB=-6.30345;VDB=0.129819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S211L|480|LOC_Os03g47070|protein_coding|CODING|LOC_Os03g47070.1|3|1),INTRON(MODIFIER||||388|LOC_Os03g47070|protein_coding|CODING|LOC_Os03g47070.2|2|1) FN513-S.SNP.3:26639492 chr03:026639492 0 W/26639492-26639492 FN513-S Single Base Substitution A-G INTERGENIC HOMO SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3871-S.SNP.3:26644574 chr03:026644574 0 W/26644574-26644574 FN3871-S SNP C -> T AC=1;AN=158;BQB=0.815541;DP=2157;DP4=961,1084,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.68608e-07;MQSB=0.915775;RPB=0.441216;SGB=-3.39162;VDB=0.223991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.3:26645708 chr03:026645708 0 W/26645708-26645708 FN2085-S SNP T -> C AC=1;AN=168;BQB=0.132725;DP=2691;DP4=1047,1583,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.0606e-05;MQSB=0.010933;RPB=0.917912;SGB=-17.5266;VDB=0.53719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.3:26651716 chr03:026651716 0 W/26651716-26651716 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.998616;DP=2807;DP4=1348,1321,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.79491e-06;MQSB=0.987334;RPB=0.286375;SGB=23.9652;VDB=0.356498;EFF=UTR_5_PRIME(MODIFIER||115||420|LOC_Os03g47120|protein_coding|CODING|LOC_Os03g47120.1|1|1) FN-206.SNP.3:26657410 chr03:026657410 0 W/26657410-26657410 FN-206 Single Base Substitution G-C UTR_3_PRIME HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2215-S.SNP.3:26662352 chr03:026662352 0 W/26662352-26662352 FN2215-S SNP C -> T AC=2;AN=190;BQB=0.960486;DP=4930;DP4=2419,2149,39,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.04018e-31;MQSB=0.533302;RPB=0.796893;SGB=136.03;VDB=0.737265;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.3:26663936 chr03:026663936 0 W/26663936-26663936 FN836-S Single Base Substitution A-G INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2681-S.SNP.3:26675065 chr03:026675065 0 W/26675065-26675065 FN2681-S SNP A -> T AC=1;AN=200;BQB=0.762935;DP=4856;DP4=2462,2189,13,10;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0450988;MQB=0.897937;MQSB=0;RPB=0.985718;SGB=100.316;VDB=0.100192;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.3:26675691 chr03:026675691 0 W/26675691-26675691 FN2704-S SNP C -> T AC=2;AN=200;BQB=0.396014;DP=3673;DP4=1563,1859,5,3;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000544514;MQB=0.00058414;MQSB=0.594521;RPB=0.911277;SGB=31.2392;VDB=0.55693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.3:26678045 chr03:026678045 0 W/26678045-26678045 FN1188-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN-295.SNP.3:26684349 chr03:026684349 0 W/26684349-26684349 FN-295 Single Base Substitution C-T INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2602-S.SNP.3:26703302 chr03:026703302 0 W/26703302-26703302 FN2602-S SNP T -> A AC=1;AN=198;BQB=0.827409;DP=3947;DP4=1746,1999,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000324038;MQSB=0.998347;RPB=0.0672741;SGB=11.1786;VDB=0.00983671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.3:26704929 chr03:026704929 0 W/26704929-26704929 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.45324;DP=5204;DP4=2591,2357,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03638e-07;MQSB=0.942504;RPB=0.927781;SGB=45.0543;VDB=0.5837;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.3:26709266 chr03:026709266 0 W/26709266-26709266 FN514-S Single Base Substitution T-C INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1414-S.SNP.3:26711451 chr03:026711451 0 W/26711451-26711451 FN1414-S Single Base Substitution T-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2095-S.SNP.3:26716838 chr03:026716838 0 W/26716838-26716838 FN2095-S SNP A -> T AC=1;AN=168;BQB=0.706919;DP=3106;DP4=1858,1189,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.13189e-10;MQSB=0.45479;RPB=0.696431;SGB=18.4989;VDB=0.303087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.3:26720599 chr03:026720599 0 W/26720599-26720599 FN1206-S Single Base Substitution T-A INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN1198-S.SNP.3:26731158 chr03:026731158 0 W/26731158-26731158 FN1198-S Single Base Substitution T-A INTRON HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN2209-S.SNP.3:26735183 chr03:026735183 0 W/26735183-26735183 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.405506;DP=4606;DP4=2465,1876,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95653e-10;MQSB=0.629896;RPB=0.92978;SGB=26.2136;VDB=0.298842;EFF=INTRON(MODIFIER||||174|LOC_Os03g47240|protein_coding|CODING|LOC_Os03g47240.1|2|1) FN2646-S.SNP.3:26736385 chr03:026736385 0 W/26736385-26736385 FN2646-S SNP A -> T AC=1;AN=200;BQB=0.783757;DP=5386;DP4=2813,2334,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185667;MQB=1.71214e-09;MQSB=0.635356;RPB=0.687888;SGB=-13.7154;VDB=0.272621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2257-S.SNP.3:26740010 chr03:026740010 0 W/26740010-26740010 FN2257-S SNP T -> C AC=2;AN=190;BQB=0.615034;DP=3960;DP4=2352,1277,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.58104e-16;MQSB=0.999881;RPB=0.927447;SGB=117.84;VDB=0.865582;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.3:26744661 chr03:026744661 0 W/26744661-26744661 FN1442-S Single Base Substitution C-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2684-S.SNP.3:26746674 chr03:026746674 0 W/26746674-26746674 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.992109;DP=5014;DP4=2407,2332,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199442;MQB=1.10658e-17;MQSB=0.884277;RPB=0.787499;SGB=58.1418;VDB=0.314928;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.3:26749322 chr03:026749322 0 W/26749322-26749322 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.830484;DP=1883;DP4=771,1015,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02052e-08;MQSB=0.465487;RPB=0.2655;SGB=61.2001;VDB=0.278415;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.3:26751357 chr03:026751357 0 W/26751357-26751357 FN-353 Single Base Substitution A-G INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3479-S.SNP.3:26752743 chr03:026752743 0 W/26752743-26752743 FN3479-S SNP G -> T AC=2;AN=184;BQB=0.804447;DP=3399;DP4=1385,1851,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.31494e-12;MQSB=0.822132;RPB=0.857485;SGB=125.613;VDB=0.225786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.3:26754264 chr03:026754264 0 W/26754264-26754264 FN2451 SNP G -> A AC=1;AN=200;BQB=0.98378;DP=3872;DP4=1769,1913,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37541e-10;MQSB=0.811771;RPB=0.791039;SGB=72.6852;VDB=0.86224;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.3:26754331 chr03:026754331 0 W/26754331-26754331 FN731-S Single Base Substitution T-G INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN3740-S.SNP.3:26760932 chr03:026760932 0 W/26760932-26760932 FN3740-S SNP A -> C AC=1;AN=190;BQB=0.708283;DP=2987;DP4=1462,1320,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85442e-08;MQSB=0.99527;RPB=0.996226;SGB=32.5467;VDB=0.535431;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.3:26770774 chr03:026770774 0 W/26770774-26770774 FN1753-S SNP A -> T AC=2;AN=188;BQB=0.995901;DP=2502;DP4=1345,1103,17,16;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.134692;MQB=0.989089;MQSB=0.0804062;RPB=0.874326;SGB=-5.76375;VDB=0.800429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R668W|692|LOC_Os03g47320|protein_coding|CODING|LOC_Os03g47320.1|6|1) FN3797-S.SNP.3:26781870 chr03:026781870 0 W/26781870-26781870 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.960236;DP=3038;DP4=1369,1550,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55176e-05;MQSB=0.951373;RPB=0.79396;SGB=30.8803;VDB=0.672731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.3:26786767 chr03:026786767 0 W/26786767-26786767 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.970881;DP=2037;DP4=1054,939,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00022966;MQSB=0.995516;RPB=0.520975;SGB=30.8803;VDB=0.378188;EFF=INTRON(MODIFIER||||342|LOC_Os03g47360|protein_coding|CODING|LOC_Os03g47360.1|3|1) FN-67.SNP.3:26791117 chr03:026791117 0 W/26791117-26791117 FN-67 Single Base Substitution G-A INTRON HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. W443-5-1-3.SNP.3:26795638 chr03:026795638 0 W/26795638-26795638 W443-5-1-3 Single Base Substitution G-A INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN796-S.SNP.3:26796127 chr03:026796127 0 W/26796127-26796127 FN796-S Single Base Substitution G-A INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2403.SNP.3:26824858 chr03:026824858 0 W/26824858-26824858 FN2403 SNP A -> G AC=1;AN=200;BQB=0.331108;DP=5369;DP4=2725,2340,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000558763;MQB=8.46334e-10;MQSB=0.321467;RPB=0.997271;SGB=9.48993;VDB=0.85243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.3:26825775 chr03:026825775 0 W/26825775-26825775 FN3859-S SNP C -> T AC=2;AN=158;BQB=0.550122;DP=2168;DP4=1156,863,7,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.5531e-05;MQSB=0.99776;RPB=0.950634;SGB=19.0798;VDB=0.860871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.3:26835295 chr03:026835295 0 W/26835295-26835295 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.528529;DP=4150;DP4=2026,1923,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.88227e-09;MQSB=0.842326;RPB=0.916387;SGB=9.3494;VDB=0.264954;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.3:26836684 chr03:026836684 0 W/26836684-26836684 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.962063;DP=2589;DP4=1204,1297,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.18601e-07;MQSB=0.919328;RPB=0.369708;SGB=34.878;VDB=0.250472;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.3:26842852 chr03:026842852 0 W/26842852-26842852 FN2278-S SNP A -> G AC=2;AN=190;BQB=0.384808;DP=4807;DP4=2288,2154,35,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.27452e-36;MQSB=0.878867;RPB=0.31139;SGB=156.461;VDB=0.767173;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.3:26843974 chr03:026843974 0 W/26843974-26843974 FN1184-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1184-S.SNP.3:26843975 chr03:026843975 0 W/26843975-26843975 FN1184-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3834-S.SNP.3:26845685 chr03:026845685 0 W/26845685-26845685 FN3834-S SNP A -> G AC=1;AN=190;BQB=0.919103;DP=2589;DP4=1277,1229,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.3512e-08;MQSB=0.838595;RPB=0.834371;SGB=49.0954;VDB=0.792905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.3:26845687 chr03:026845687 0 W/26845687-26845687 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.93287;DP=2561;DP4=1266,1223,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91805e-09;MQSB=0.787609;RPB=0.943627;SGB=36.1006;VDB=0.846922;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.3:26857354 chr03:026857354 0 W/26857354-26857354 FN518-S Single Base Substitution C-T INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2147-S.SNP.3:26867422 chr03:026867422 0 W/26867422-26867422 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.0860491;DP=3141;DP4=1627,1466,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00012482;MQSB=0.970167;RPB=0.746437;SGB=22.1847;VDB=0.949339;EFF=INTERGENIC(MODIFIER||||||||||1) FN1249-S.SNP.3:26870665 chr03:026870665 0 W/26870665-26870665 FN1249-S Single Base Substitution T-G INTRON HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2459.SNP.3:26872464 chr03:026872464 0 W/26872464-26872464 FN2459 SNP C -> A AC=1;AN=200;BQB=0.100826;DP=4617;DP4=2051,2304,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81551e-11;MQSB=0.999836;RPB=0.852442;SGB=77.2904;VDB=0.642473;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S117*|134|LOC_Os03g47510|protein_coding|CODING|LOC_Os03g47510.1|5|1) FN2408.SNP.3:26892910 chr03:026892910 0 W/26892910-26892910 FN2408 SNP G -> A AC=1;AN=200;BQB=0.291995;DP=4518;DP4=1938,2377,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.81424e-08;MQSB=0.723613;RPB=0.208933;SGB=54.2646;VDB=0.734745;EFF=INTRON(MODIFIER||||365|LOC_Os03g47560|protein_coding|CODING|LOC_Os03g47560.1|5|1) FN2562-S.SNP.3:26897280 chr03:026897280 0 W/26897280-26897280 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.9207;DP=4301;DP4=2141,1839,17,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232504;MQB=1.27808e-18;MQSB=0.00219739;RPB=0.856804;SGB=115.647;VDB=0.74301;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.3:26900382 chr03:026900382 0 W/26900382-26900382 FN1453-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g47570 retrotransposon protein, putative, unclassified, expressed SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2164-S.SNP.3:26901054 chr03:026901054 0 W/26901054-26901054 FN2164-S SNP G -> A AC=1;AN=168;BQB=1.4464e-05;DP=3917;DP4=1842,2030,11,17;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00178708;MQB=4.45637e-09;MQSB=0.00011048;RPB=0.775535;SGB=-270.463;VDB=0.383702;EFF=INTRON(MODIFIER||||375|LOC_Os03g47570|protein_coding|CODING|LOC_Os03g47570.1|3|1) FN487-S.SNP.3:26901296 chr03:026901296 0 W/26901296-26901296 FN487-S Single Base Substitution T-A INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2791-S.SNP.3:26910517 chr03:026910517 0 W/26910517-26910517 FN2791-S SNP A -> C AC=1;AN=198;BQB=0.397463;DP=3322;DP4=1645,1571,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35244e-06;MQSB=0.494544;RPB=0.704529;SGB=32.9588;VDB=0.178357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.3:26911774 chr03:026911774 0 W/26911774-26911774 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.873198;DP=3523;DP4=1612,1597,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.7886e-09;MQSB=0.292547;RPB=0.794219;SGB=43.8747;VDB=0.963572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.3:26919813 chr03:026919813 0 W/26919813-26919813 FN2645-S SNP A -> T AC=2;AN=200;BQB=0.801368;DP=4888;DP4=2166,2503,18,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.43595e-26;MQSB=0.0162948;RPB=0.683523;SGB=155.635;VDB=0.234436;EFF=INTRON(MODIFIER||||264|LOC_Os03g47580|protein_coding|CODING|LOC_Os03g47580.1|5|1) FN2645-S.SNP.3:26919982 chr03:026919982 0 W/26919982-26919982 FN2645-S SNP G -> C AC=2;AN=200;BQB=0.500903;DP=4881;DP4=2400,2153,25,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.91716e-29;MQSB=0.805515;RPB=0.186089;SGB=9.28106;VDB=0.789912;EFF=INTRON(MODIFIER||||264|LOC_Os03g47580|protein_coding|CODING|LOC_Os03g47580.1|5|1) FN505-S.SNP.3:26922428 chr03:026922428 0 W/26922428-26922428 FN505-S Single Base Substitution C-T INTRON HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1630-S.SNP.3:26924224 chr03:026924224 0 W/26924224-26924224 FN1630-S Single Base Substitution C-T INTRON HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1324-S.SNP.3:26924940 chr03:026924940 0 W/26924940-26924940 FN1324-S Single Base Substitution C-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1324-S.SNP.3:26924942 chr03:026924942 0 W/26924942-26924942 FN1324-S Single Base Substitution C-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN3942-S.SNP.3:26927552 chr03:026927552 0 W/26927552-26927552 FN3942-S SNP C -> T AC=1;AN=168;BQB=0.998262;DP=2920;DP4=1625,1127,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.45894e-08;MQSB=0.974948;RPB=0.45316;SGB=65.4653;VDB=0.307546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.3:26928145 chr03:026928145 0 W/26928145-26928145 FN3679-S SNP C -> T AC=2;AN=190;BQB=0.860189;DP=3282;DP4=1699,1426,31,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.53036e-32;MQSB=0.848015;RPB=0.696798;SGB=239.371;VDB=0.433967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.3:26929474 chr03:026929474 0 W/26929474-26929474 FN1252-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1022-S.SNP.3:26929899 chr03:026929899 0 W/26929899-26929899 FN1022-S Single Base Substitution T-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3792-S.SNP.3:26932850 chr03:026932850 0 W/26932850-26932850 FN3792-S SNP C -> A AC=1;AN=190;BQB=0.897282;DP=3921;DP4=1582,2188,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000255037;MQB=1.03964e-15;MQSB=0.844448;RPB=0.997282;SGB=56.8601;VDB=0.149077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.3:26934120 chr03:026934120 0 W/26934120-26934120 FN2412 SNP C -> T AC=1;AN=200;BQB=0.373555;DP=2370;DP4=1622,573,12,2;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000843882;MQB=2.46782e-05;MQSB=0.00454795;RPB=0.90719;SGB=58.8698;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.3:26935301 chr03:026935301 0 W/26935301-26935301 FN2572-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN4129-S.SNP.3:26935383 chr03:026935383 0 W/26935383-26935383 FN4129-S SNP C -> T AC=1;AN=182;BQB=0.955908;DP=2658;DP4=1172,1428,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000376223;MQB=9.24925e-05;MQSB=0.872868;RPB=0.412934;SGB=21.5845;VDB=0.228571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R231W|1044|LOC_Os03g47590|protein_coding|CODING|LOC_Os03g47590.1|1|1) FN1011-S.SNP.3:26937352 chr03:026937352 0 W/26937352-26937352 FN1011-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g47590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN909-S.SNP.3:26938162 chr03:026938162 0 W/26938162-26938162 FN909-S Single Base Substitution T-A INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN939-S.SNP.3:26938960 chr03:026938960 0 W/26938960-26938960 FN939-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN1099-S.SNP.3:26945923 chr03:026945923 0 W/26945923-26945923 FN1099-S Single Base Substitution G-A INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1008-S.SNP.3:26950485 chr03:026950485 0 W/26950485-26950485 FN1008-S Single Base Substitution A-C INTERGENIC HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN3309-S.SNP.3:26961320 chr03:026961320 0 W/26961320-26961320 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.991082;DP=2837;DP4=1270,1502,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.22389e-06;MQSB=0.999904;RPB=0.370509;SGB=28.7043;VDB=0.878897;EFF=INTRON(MODIFIER||||53|LOC_Os03g47614|protein_coding|CODING|LOC_Os03g47614.1|1|1) FN484-S.SNP.3:26963306 chr03:026963306 0 W/26963306-26963306 FN484-S Single Base Substitution T-C INTRON HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN601-S.SNP.3:26963759 chr03:026963759 0 W/26963759-26963759 FN601-S Single Base Substitution G-C INTRON HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2689-S.SNP.3:26968831 chr03:026968831 0 W/26968831-26968831 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.998097;DP=4311;DP4=2013,2039,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38786e-11;MQSB=0.993438;RPB=0.994655;SGB=54.6902;VDB=0.668172;EFF=INTRON(MODIFIER||||485|LOC_Os03g47620|protein_coding|CODING|LOC_Os03g47620.1|9|1) FN4185-S.SNP.3:26975626 chr03:026975626 0 W/26975626-26975626 FN4185-S SNP C -> T AC=1;AN=170;BQB=0.240408;DP=2016;DP4=875,1084,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.52556e-06;MQSB=0.881455;RPB=0.758209;SGB=34.878;VDB=0.794576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.3:26983776 chr03:026983776 0 W/26983776-26983776 FN2702-S SNP A -> G AC=1;AN=200;BQB=0.999608;DP=4409;DP4=2033,2221,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.81383e-12;MQSB=0.833898;RPB=0.163667;SGB=65.5058;VDB=0.183258;EFF=INTRON(MODIFIER||||361|LOC_Os03g47640|protein_coding|CODING|LOC_Os03g47640.1|7|1) FN1033-S.SNP.3:26985054 chr03:026985054 0 W/26985054-26985054 FN1033-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2551-S.SNP.3:26995450 chr03:026995450 0 W/26995450-26995450 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.735544;DP=4485;DP4=2088,2158,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.72152e-19;MQSB=0.863336;RPB=0.892911;SGB=132.261;VDB=0.872656;EFF=UTR_3_PRIME(MODIFIER||220||472|LOC_Os03g47650|protein_coding|CODING|LOC_Os03g47650.1|12|1) FN2664-S.SNP.3:26996863 chr03:026996863 0 W/26996863-26996863 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.824777;DP=4809;DP4=1896,2515,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67973e-20;MQSB=0.948032;RPB=0.99713;SGB=115.978;VDB=0.190775;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.3:27008755 chr03:027008755 0 W/27008755-27008755 FN1193-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3879-S.SNP.3:27016272 chr03:027016272 0 W/27016272-27016272 FN3879-S SNP A -> G AC=1;AN=158;BQB=0.67312;DP=2446;DP4=1130,1224,5,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.26925e-10;MQSB=0.993049;RPB=0.931896;SGB=82.0227;VDB=0.020937;EFF=INTRON(MODIFIER||||541|LOC_Os03g47686|protein_coding|CODING|LOC_Os03g47686.1|8|1) FN809-S.SNP.3:27018687 chr03:027018687 0 W/27018687-27018687 FN809-S Single Base Substitution T-C INTRON HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN4001-S.SNP.3:27019591 chr03:027019591 0 W/27019591-27019591 FN4001-S SNP A -> T AC=2;AN=168;BQB=0.563334;DP=2728;DP4=1347,1190,13,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05281e-12;MQSB=0.931125;RPB=0.953345;SGB=79.3486;VDB=0.577465;EFF=INTRON(MODIFIER||||541|LOC_Os03g47686|protein_coding|CODING|LOC_Os03g47686.1|11|1) FN3937-S.SNP.3:27039948 chr03:027039948 0 W/27039948-27039948 FN3937-S SNP G -> A AC=1;AN=158;BQB=0.65227;DP=2438;DP4=1027,1345,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.7027e-05;MQSB=0.830494;RPB=0.394677;SGB=7.23273;VDB=0.156835;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.3:27042018 chr03:027042018 0 W/27042018-27042018 FN1682-S SNP G -> C AC=1;AN=188;BQB=0.660204;DP=4046;DP4=1682,2309,12,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.34738e-16;MQSB=0.999055;RPB=0.309761;SGB=30.2309;VDB=0.627908;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN-361 Single Base Substitution T-A INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN-70.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN-70 Single Base Substitution T-A INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1563-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN1563-S Single Base Substitution T-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2229-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN2229-S SNP T -> A AC=2;AN=190;BQB=0.984473;DP=4623;DP4=2194,2091,33,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.38163e-30;MQSB=0.501899;RPB=0.997713;SGB=206.687;VDB=0.16953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN2320 SNP T -> A AC=2;AN=192;BQB=0.418209;DP=4792;DP4=2301,2195,22,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.25774e-19;MQSB=0.719285;RPB=0.817233;SGB=41.7705;VDB=0.15409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN2473 SNP T -> A AC=2;AN=200;BQB=0.219243;DP=4579;DP4=2165,2157,17,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.03119e-13;MQSB=0.739856;RPB=0.334729;SGB=23.9365;VDB=0.455201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN2650-S SNP T -> A AC=1;AN=200;BQB=0.974239;DP=4963;DP4=2433,2341,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12419e-11;MQSB=0.999999;RPB=0.902897;SGB=54.6902;VDB=0.883343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN3332-S SNP T -> A AC=1;AN=184;BQB=0.98345;DP=2742;DP4=1447,1223,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.90409e-10;MQSB=0.901221;RPB=0.836766;SGB=42.7914;VDB=0.681862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN3627-S SNP T -> A AC=2;AN=190;BQB=0.67755;DP=2697;DP4=1381,1217,22,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.34841e-17;MQSB=0.832636;RPB=0.642439;SGB=72.1834;VDB=0.294239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN3923-S SNP T -> A AC=2;AN=158;BQB=0.958001;DP=2261;DP4=1173,996,12,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.72216e-14;MQSB=0.963046;RPB=0.973894;SGB=67.7679;VDB=0.833413;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN420-S Single Base Substitution T-A INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN943-S.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN943-S Single Base Substitution T-A INTERGENIC HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN_826-4-1.SNP.3:27054328 chr03:027054328 0 W/27054328-27054328 FN_826-4-1 Single Base Substitution T-A Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN2684-S.SNP.3:27065449 chr03:027065449 0 W/27065449-27065449 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.410692;DP=4993;DP4=2272,2482,20,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.44209e-22;MQSB=0.766893;RPB=0.842791;SGB=155.578;VDB=0.813641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.3:27065884 chr03:027065884 0 W/27065884-27065884 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.978487;DP=3573;DP4=2209,1203,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.37317e-06;MQSB=0.668882;RPB=0.2351;SGB=28.7043;VDB=0.656818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.3:27067163 chr03:027067163 0 W/27067163-27067163 FN1076-S Single Base Substitution C-T INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2273-S.SNP.3:27069485 chr03:027069485 0 W/27069485-27069485 FN2273-S SNP C -> T AC=1;AN=190;BQB=0.932684;DP=4712;DP4=2093,2315,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.865e-13;MQSB=0.875965;RPB=0.496424;SGB=44.0907;VDB=0.702445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.3:27074742 chr03:027074742 0 W/27074742-27074742 FN3563-S SNP G -> T AC=2;AN=188;BQB=0.997895;DP=2287;DP4=796,1320,11,15;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.000437254;MQB=9.87016e-05;MQSB=1.06222e-11;RPB=0.452113;SGB=82.0471;VDB=0.310847;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.3:27074870 chr03:027074870 0 W/27074870-27074870 FN3393-S SNP T -> G AC=1;AN=184;BQB=0.833052;DP=2757;DP4=1088,1476,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000725426;MQB=2.01181e-07;MQSB=0.476129;RPB=0.812417;SGB=28.3187;VDB=0.00219991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.3:27075278 chr03:027075278 0 W/27075278-27075278 FN2128-S SNP A -> C AC=1;AN=168;BQB=0.000894591;DP=3550;DP4=1699,1797,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83822e-09;MQSB=0.755219;RPB=0.172347;SGB=-182.327;VDB=0.475567;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.3:27078647 chr03:027078647 0 W/27078647-27078647 FN1481-S Single Base Substitution G-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN909-S.SNP.3:27096791 chr03:027096791 0 W/27096791-27096791 FN909-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g47754 SAB, putative, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN511-S.SNP.3:27098713 chr03:027098713 0 W/27098713-27098713 FN511-S Single Base Substitution A-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-409.SNP.3:27105821 chr03:027105821 0 W/27105821-27105821 FN-409 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g47760 SAB, putative, expressed SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1131-S.SNP.3:27112731 chr03:027112731 0 W/27112731-27112731 FN1131-S Single Base Substitution T-C INTRON HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN4166-S.SNP.3:27116745 chr03:027116745 0 W/27116745-27116745 FN4166-S SNP G -> A AC=2;AN=170;BQB=0.952087;DP=2130;DP4=1170,887,5,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.66773e-06;MQSB=0.933677;RPB=0.489966;SGB=38.987;VDB=0.414348;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.3:27118973 chr03:027118973 0 W/27118973-27118973 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.997545;DP=2226;DP4=929,1240,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.39128e-07;MQSB=0.987926;RPB=0.982747;SGB=27.9928;VDB=0.786011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-171.SNP.3:27122060 chr03:027122060 0 W/27122060-27122060 FN-171 Single Base Substitution T-C INTRON HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN466-S.SNP.3:27124602 chr03:027124602 0 W/27124602-27124602 FN466-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN3958-S.SNP.3:27129665 chr03:027129665 0 W/27129665-27129665 FN3958-S SNP G -> A AC=1;AN=168;BQB=0.98086;DP=2669;DP4=1175,1392,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.2947e-12;MQSB=0.998087;RPB=0.982461;SGB=31.908;VDB=0.551438;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R296W|535|LOC_Os03g47790|protein_coding|CODING|LOC_Os03g47790.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R296W|535|LOC_Os03g47790|protein_coding|CODING|LOC_Os03g47790.3|1|1) FN714-S.SNP.3:27135667 chr03:027135667 0 W/27135667-27135667 FN714-S Single Base Substitution G-A INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2192-S.SNP.3:27138357 chr03:027138357 0 W/27138357-27138357 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.377617;DP=4508;DP4=2139,1984,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000221828;MQB=1.43942e-10;MQSB=0.0150747;RPB=0.97754;SGB=57.4238;VDB=0.502883;EFF=INTRON(MODIFIER||||308|LOC_Os03g47800|protein_coding|CODING|LOC_Os03g47800.1|1|1) FN2622-S.SNP.3:27150589 chr03:027150589 0 W/27150589-27150589 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.681708;DP=4734;DP4=2376,2195,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82765e-11;MQSB=0.99753;RPB=0.0192232;SGB=58.2954;VDB=0.403251;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.3:27161284 chr03:027161284 0 W/27161284-27161284 FN920-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g47820 PINHEAD, putative, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN1128-S.SNP.3:27162114 chr03:027162114 0 W/27162114-27162114 FN1128-S Single Base Substitution C-T INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN2386.SNP.3:27182532 chr03:027182532 0 W/27182532-27182532 FN2386 SNP G -> A AC=1;AN=192;BQB=0.236364;DP=4365;DP4=1896,2132,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.61537e-10;MQSB=0.785978;RPB=0.856272;SGB=39.1713;VDB=0.644296;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.3:27182565 chr03:027182565 0 W/27182565-27182565 FN1557-S Single Base Substitution C-T INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-285.SNP.3:27187522 chr03:027187522 0 W/27187522-27187522 FN-285 Single Base Substitution C-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN992-S.SNP.3:27190513 chr03:027190513 0 W/27190513-27190513 FN992-S Single Base Substitution C-T INTERGENIC HOMO SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN992-S.SNP.3:27190520 chr03:027190520 0 W/27190520-27190520 FN992-S Single Base Substitution C-T INTERGENIC HOMO SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN3452-S.SNP.3:27191632 chr03:027191632 0 W/27191632-27191632 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.912066;DP=2864;DP4=1026,1777,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11145e-06;MQSB=0.982214;RPB=0.999113;SGB=39.699;VDB=0.0199125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.3:27193381 chr03:027193381 0 W/27193381-27193381 FN2347 SNP C -> A AC=2;AN=192;BQB=0.672123;DP=4171;DP4=2427,1462,31,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.41933e-27;MQSB=0.646229;RPB=0.742111;SGB=160.968;VDB=0.839821;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.3:27196790 chr03:027196790 0 W/27196790-27196790 FN4093-S SNP A -> T AC=2;AN=182;BQB=0.952029;DP=3395;DP4=1611,1675,19,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.01934e-19;MQSB=0.907925;RPB=0.99255;SGB=138.839;VDB=0.631924;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.3:27202613 chr03:027202613 0 W/27202613-27202613 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.970995;DP=2162;DP4=859,1225,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21678e-06;MQSB=0.911935;RPB=0.601231;SGB=44.5415;VDB=0.512353;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.3:27206127 chr03:027206127 0 W/27206127-27206127 FN-403 Single Base Substitution G-A INTERGENIC HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.3:27206127 chr03:027206127 0 W/27206127-27206127 FN403-S Single Base Substitution G-A INTERGENIC HOMO SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN817-S.SNP.3:27208968 chr03:027208968 0 W/27208968-27208968 FN817-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g47860 transferase family protein, putative, expressed SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3663-S.SNP.3:27211480 chr03:027211480 0 W/27211480-27211480 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.203273;DP=2828;DP4=1243,1448,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69136e-05;MQSB=0.982951;RPB=0.818297;SGB=23.6597;VDB=0.379909;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-S.SNP.3:27217479 chr03:027217479 0 W/27217479-27217479 FN1136-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1444-S.SNP.3:27225713 chr03:027225713 0 W/27225713-27225713 FN1444-S Single Base Substitution T-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3286-S.SNP.3:27227363 chr03:027227363 0 W/27227363-27227363 FN3286-S SNP T -> C AC=2;AN=184;BQB=0.813522;DP=2854;DP4=1278,1436,18,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.29252e-19;MQSB=0.950286;RPB=0.99796;SGB=170.831;VDB=0.710551;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.3:27228055 chr03:027228055 0 W/27228055-27228055 FN598-S Single Base Substitution A-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN-128.SNP.3:27228368 chr03:027228368 0 W/27228368-27228368 FN-128 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g47902 expressed protein SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN1035-S.SNP.3:27234151 chr03:027234151 0 W/27234151-27234151 FN1035-S Single Base Substitution C-T INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2665-S.SNP.3:27245734 chr03:027245734 0 W/27245734-27245734 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.989654;DP=4551;DP4=2371,1975,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07107e-12;MQSB=0.637766;RPB=0.509107;SGB=81.8956;VDB=0.426414;EFF=INTRON(MODIFIER||||1108|LOC_Os03g47930|protein_coding|CODING|LOC_Os03g47930.1|17|1) FN439-S.SNP.3:27249797 chr03:027249797 0 W/27249797-27249797 FN439-S Single Base Substitution T-C INTRON HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-281.SNP.3:27255212 chr03:027255212 0 W/27255212-27255212 FN-281 Single Base Substitution A-T INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN986-S.SNP.3:27282006 chr03:027282006 0 W/27282006-27282006 FN986-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g47980 expressed protein SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN475-S.SNP.3:27287837 chr03:027287837 0 W/27287837-27287837 FN475-S Single Base Substitution C-T INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1704-S.SNP.3:27295303 chr03:027295303 0 W/27295303-27295303 FN1704-S SNP C -> T AC=2;AN=188;BQB=0.00191066;DP=3024;DP4=1535,1411,19,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.92016e-12;MQSB=0.999795;RPB=0.0674044;SGB=-215.737;VDB=0.486916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.3:27297760 chr03:027297760 0 W/27297760-27297760 FN2317 SNP G -> A AC=1;AN=192;BQB=0.570891;DP=3306;DP4=1668,1258,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.000870191;MQSB=1.07335e-08;RPB=0.241218;SGB=49.2105;VDB=0.209801;EFF=INTRON(MODIFIER||||741|LOC_Os03g48010|protein_coding|CODING|LOC_Os03g48010.1|1|1) FN4089-S.SNP.3:27299613 chr03:027299613 0 W/27299613-27299613 FN4089-S SNP A -> C AC=2;AN=182;BQB=0.929826;DP=2935;DP4=1462,1390,14,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.12566e-17;MQSB=0.994468;RPB=0.861932;SGB=95.3123;VDB=0.81844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D577A|741|LOC_Os03g48010|protein_coding|CODING|LOC_Os03g48010.1|4|1) FN1536-S.SNP.3:27300782 chr03:027300782 0 W/27300782-27300782 FN1536-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-393.SNP.3:27301539 chr03:027301539 0 W/27301539-27301539 FN-393 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g48030 integral membrane HPP family protein, putative, expressed SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-98.SNP.3:27304695 chr03:027304695 0 W/27304695-27304695 FN-98 Single Base Substitution T-A INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2546-S.SNP.3:27308884 chr03:027308884 0 W/27308884-27308884 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.999874;DP=4204;DP4=2000,2016,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00618459;MQB=0.012242;MQSB=0.168062;RPB=0.834954;SGB=1.37381;VDB=0.914306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.3:27312731 chr03:027312731 0 W/27312731-27312731 FN3447-S SNP C -> T AC=1;AN=184;BQB=0.929772;DP=2455;DP4=1109,1225,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.73474e-07;MQSB=0.997745;RPB=0.476064;SGB=39.699;VDB=0.0622373;EFF=UTR_3_PRIME(MODIFIER||249||183|LOC_Os03g48040|protein_coding|CODING|LOC_Os03g48040.1|8|1),UTR_3_PRIME(MODIFIER||249||181|LOC_Os03g48040|protein_coding|CODING|LOC_Os03g48040.2|8|1) FN3579-S.SNP.3:27315700 chr03:027315700 0 W/27315700-27315700 FN3579-S SNP A -> C AC=1;AN=188;BQB=0.993369;DP=2564;DP4=1343,1133,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77104e-13;MQSB=0.983311;RPB=0.511151;SGB=64.3306;VDB=0.0777722;EFF=INTRON(MODIFIER||||340|LOC_Os03g48050|protein_coding|CODING|LOC_Os03g48050.1|3|1) FN735-S.SNP.3:27322460 chr03:027322460 0 W/27322460-27322460 FN735-S Single Base Substitution T-A INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2467.SNP.3:27326751 chr03:027326751 0 W/27326751-27326751 FN2467 SNP G -> T AC=1;AN=200;BQB=0.614905;DP=3539;DP4=1046,2142,3,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.89249e-12;MQSB=0.911934;RPB=0.901593;SGB=17.5158;VDB=0.83723;EFF=INTERGENIC(MODIFIER||||||||||1) FN-193.SNP.3:27333853 chr03:027333853 0 W/27333853-27333853 FN-193 Single Base Substitution C-A INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1210-S.SNP.3:27334044 chr03:027334044 0 W/27334044-27334044 FN1210-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2305.SNP.3:27342813 chr03:027342813 0 W/27342813-27342813 FN2305 SNP G -> A AC=1;AN=192;BQB=0.967886;DP=5240;DP4=2445,2296,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.86399e-08;MQSB=0.979175;RPB=0.629005;SGB=-0.466926;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.3:27348174 chr03:027348174 0 W/27348174-27348174 FN438-S Single Base Substitution C-T INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN803-S.SNP.3:27348174 chr03:027348174 0 W/27348174-27348174 FN803-S Single Base Substitution C-T INTRON HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN369-S.SNP.3:27362661 chr03:027362661 0 W/27362661-27362661 FN369-S Single Base Substitution G-A INTERGENIC HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN1577-S.SNP.3:27362819 chr03:027362819 0 W/27362819-27362819 FN1577-S Single Base Substitution T-G INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3613-S.SNP.3:27367936 chr03:027367936 0 W/27367936-27367936 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.71134;DP=2929;DP4=1445,1348,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.47575e-10;MQSB=0.998644;RPB=0.126938;SGB=38.983;VDB=0.414899;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.3:27372970 chr03:027372970 0 W/27372970-27372970 FN-120 Single Base Substitution T-G INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2232-S.SNP.3:27376629 chr03:027376629 0 W/27376629-27376629 FN2232-S SNP A -> G AC=2;AN=190;BQB=0.999029;DP=5213;DP4=2393,2509,16,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000191828;MQB=9.60816e-19;MQSB=0.950845;RPB=0.81482;SGB=110.732;VDB=0.484944;EFF=INTRON(MODIFIER||||1557|LOC_Os03g48140|protein_coding|CODING|LOC_Os03g48140.1|32|1) FN4002-S.SNP.3:27380930 chr03:027380930 0 W/27380930-27380930 FN4002-S SNP G -> A AC=2;AN=168;BQB=0.999256;DP=2626;DP4=1135,1384,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.96495e-16;MQSB=0.978505;RPB=0.854031;SGB=105.343;VDB=0.574841;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q643*|1557|LOC_Os03g48140|protein_coding|CODING|LOC_Os03g48140.1|18|1);LOF=(LOC_Os03g48140|LOC_Os03g48140|1|1.00);NMD=(LOC_Os03g48140|LOC_Os03g48140|1|1.00) FN4002-S.SNP.3:27380931 chr03:027380931 0 W/27380931-27380931 FN4002-S SNP C -> A AC=2;AN=168;BQB=0.894599;DP=2622;DP4=1123,1371,12,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.92681e-17;MQSB=0.998089;RPB=0.910745;SGB=109.773;VDB=0.454271;EFF=SPLICE_SITE_REGION(LOW||||1557|LOC_Os03g48140|protein_coding|CODING|LOC_Os03g48140.1|18|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L642|1557|LOC_Os03g48140|protein_coding|CODING|LOC_Os03g48140.1|18|1) FN3515-S.SNP.3:27392460 chr03:027392460 0 W/27392460-27392460 FN3515-S SNP C -> T AC=2;AN=188;BQB=0.134263;DP=3022;DP4=1572,1341,16,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.88588e-15;MQSB=0.85286;RPB=0.72737;SGB=61.6823;VDB=0.86536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.3:27396714 chr03:027396714 0 W/27396714-27396714 FN2237-S SNP A -> G AC=2;AN=190;BQB=0.975978;DP=4409;DP4=1843,2161,7,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5815e-06;MQSB=0.962651;RPB=0.591613;SGB=39.6545;VDB=0.79373;EFF=INTRON(MODIFIER||||162|LOC_Os03g48150|protein_coding|CODING|LOC_Os03g48150.1|1|1) FN1033-S.SNP.3:27401335 chr03:027401335 0 W/27401335-27401335 FN1033-S Single Base Substitution T-G INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4148-S.SNP.3:27404607 chr03:027404607 0 W/27404607-27404607 FN4148-S SNP A -> G AC=2;AN=170;BQB=0.947876;DP=2744;DP4=1270,1373,8,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.25554e-16;MQSB=0.89972;RPB=0.820892;SGB=123.397;VDB=0.225301;EFF=INTRON(MODIFIER||||275|LOC_Os03g48160|protein_coding|CODING|LOC_Os03g48160.1|7|1) FN2725-S.SNP.3:27409767 chr03:027409767 0 W/27409767-27409767 FN2725-S SNP A -> C AC=1;AN=200;BQB=0.0393522;DP=5475;DP4=2647,2609,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61586e-08;MQSB=0.965341;RPB=0.994934;SGB=-15.5309;VDB=0.650373;EFF=INTRON(MODIFIER||||529|LOC_Os03g48170|protein_coding|CODING|LOC_Os03g48170.1|3|1) FN2175-S.SNP.3:27411296 chr03:027411296 0 W/27411296-27411296 FN2175-S SNP A -> G AC=1;AN=168;BQB=0.0719047;DP=4196;DP4=2021,2130,17,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.07545e-12;MQSB=0.96581;RPB=0.928919;SGB=46.4929;VDB=0.0891562;EFF=INTRON(MODIFIER||||529|LOC_Os03g48170|protein_coding|CODING|LOC_Os03g48170.1|5|1) FN3448-S.SNP.3:27413643 chr03:027413643 0 W/27413643-27413643 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.999616;DP=3190;DP4=1705,1338,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.88634e-06;MQSB=0.995438;RPB=0.999654;SGB=35.7479;VDB=0.246834;EFF=UTR_3_PRIME(MODIFIER||160||552|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.2|2|1),UTR_3_PRIME(MODIFIER||171||587|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.1|3|1) FN2230-S.SNP.3:27413805 chr03:027413805 0 W/27413805-27413805 FN2230-S SNP A -> T AC=2;AN=190;BQB=0.901946;DP=4591;DP4=2097,1985,17,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000217817;MQB=1.7126e-23;MQSB=0.850121;RPB=0.741425;SGB=135.609;VDB=0.126303;EFF=STOP_LOST(HIGH|MISSENSE|Tga/Aga|*553R|552|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.2|2|1),UTR_3_PRIME(MODIFIER||9||587|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.1|3|1) FN2230-S.SNP.3:27413806 chr03:027413806 0 W/27413806-27413806 FN2230-S SNP C -> T AC=2;AN=190;BQB=0.944417;DP=4581;DP4=2228,2103,18,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000218293;MQB=4.49868e-23;MQSB=0.608506;RPB=0.450902;SGB=181.158;VDB=0.217042;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K552|552|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.2|2|1),UTR_3_PRIME(MODIFIER||8||587|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.1|3|1) FN2181-S.SNP.3:27414728 chr03:027414728 0 W/27414728-27414728 FN2181-S SNP G -> T AC=1;AN=190;BQB=0.882344;DP=3574;DP4=1497,1828,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000559597;MQB=7.58809e-09;MQSB=0.937251;RPB=0.386678;SGB=39.6545;VDB=0.752795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q284K|587|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A245E|552|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.2|2|1) FN2181-S.SNP.3:27414729 chr03:027414729 0 W/27414729-27414729 FN2181-S SNP C -> T AC=1;AN=190;BQB=0.178948;DP=3563;DP4=1480,1711,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000561325;MQB=8.74002e-10;MQSB=0.737716;RPB=0.144831;SGB=76.4186;VDB=0.385941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A245T|552|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K283|587|LOC_Os03g48180|protein_coding|CODING|LOC_Os03g48180.1|3|1) FN1280-S.SNP.3:27419608 chr03:027419608 0 W/27419608-27419608 FN1280-S Single Base Substitution G-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN347-S.SNP.3:27426126 chr03:027426126 0 W/27426126-27426126 FN347-S Single Base Substitution A-G INTERGENIC HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN-345.SNP.3:27429748 chr03:027429748 0 W/27429748-27429748 FN-345 Single Base Substitution C-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN543-S.SNP.3:27431507 chr03:027431507 0 W/27431507-27431507 FN543-S Single Base Substitution C-T INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2711-S.SNP.3:27434028 chr03:027434028 0 W/27434028-27434028 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.993963;DP=4788;DP4=2520,2058,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16114e-07;MQSB=0.999896;RPB=0.925169;SGB=45.0543;VDB=0.960694;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K215|229|LOC_Os03g48190|protein_coding|CODING|LOC_Os03g48190.1|3|1),INTRON(MODIFIER||||288|LOC_Os03g48190|protein_coding|CODING|LOC_Os03g48190.2|2|1) FN3852-S.SNP.3:27438080 chr03:027438080 0 W/27438080-27438080 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.953087;DP=2351;DP4=1136,1120,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.95507e-05;MQSB=0.942023;RPB=0.832793;SGB=33.9591;VDB=0.803731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.3:27444505 chr03:027444505 0 W/27444505-27444505 FN3380-S SNP T -> G AC=2;AN=184;BQB=0.957941;DP=3249;DP4=1483,1591,17,18;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.000307787;MQB=9.8674e-08;MQSB=0.000635457;RPB=0.626797;SGB=73.7109;VDB=0.224351;EFF=INTERGENIC(MODIFIER||||||||||1) FN777-S.SNP.3:27447522 chr03:027447522 0 W/27447522-27447522 FN777-S Single Base Substitution T-A INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN619-S.SNP.3:27447624 chr03:027447624 0 W/27447624-27447624 FN619-S Single Base Substitution T-G INTERGENIC HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN2671-S.SNP.3:27448672 chr03:027448672 0 W/27448672-27448672 FN2671-S SNP G -> T AC=1;AN=200;BQB=0.930331;DP=4816;DP4=2194,2357,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27734e-12;MQSB=0.955773;RPB=0.99762;SGB=86.5007;VDB=0.565487;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.3:27449934 chr03:027449934 0 W/27449934-27449934 FN533-S Single Base Substitution A-G INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN3387-S.SNP.3:27451574 chr03:027451574 0 W/27451574-27451574 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.921439;DP=2873;DP4=1645,1048,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22268e-07;MQSB=0.301802;RPB=0.311146;SGB=32.2261;VDB=0.440289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.3:27456627 chr03:027456627 0 W/27456627-27456627 FN2195-S SNP G -> T AC=1;AN=190;BQB=0.98583;DP=3599;DP4=1625,1750,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000220948;MQSB=0.00365714;RPB=0.861809;SGB=26.3271;VDB=0.734439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.3:27458252 chr03:027458252 0 W/27458252-27458252 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.873609;DP=1706;DP4=745,873,1,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.97659e-05;MQSB=0.0106149;RPB=0.306749;SGB=25.2211;VDB=0.604698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.3:27458253 chr03:027458253 0 W/27458253-27458253 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.879112;DP=1704;DP4=749,890,1,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.73877e-05;MQSB=0.00422437;RPB=0.291624;SGB=25.2211;VDB=0.607474;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.3:27460500 chr03:027460500 0 W/27460500-27460500 FN3856-S SNP A -> T AC=2;AN=158;BQB=0.677034;DP=2015;DP4=906,999,6,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.97604e-07;MQSB=0.956076;RPB=0.0394653;SGB=21.4492;VDB=0.0188569;EFF=INTRON(MODIFIER||||466|LOC_Os03g48260|protein_coding|CODING|LOC_Os03g48260.1|2|1) FN_N1-220-1.SNP.3:27470346 chr03:027470346 0 W/27470346-27470346 FN_N1-220-1 Single Base Substitution C-A Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN468-S.SNP.3:27477120 chr03:027477120 0 W/27477120-27477120 FN468-S Single Base Substitution C-T INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1480-S.SNP.3:27480567 chr03:027480567 0 W/27480567-27480567 FN1480-S Single Base Substitution G-A INTERGENIC Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN-210.SNP.3:27481284 chr03:027481284 0 W/27481284-27481284 FN-210 Single Base Substitution C-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN1571-S.SNP.3:27481391 chr03:027481391 0 W/27481391-27481391 FN1571-S Single Base Substitution G-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1571-S.SNP.3:27481392 chr03:027481392 0 W/27481392-27481392 FN1571-S Single Base Substitution C-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-79.SNP.3:27481755 chr03:027481755 0 W/27481755-27481755 FN-79 Single Base Substitution G-A INTERGENIC HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3418-S.SNP.3:27482868 chr03:027482868 0 W/27482868-27482868 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.887812;DP=2930;DP4=1314,1474,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.99378e-05;MQSB=0.297708;RPB=0.99752;SGB=44.2207;VDB=0.655343;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.3:27485544 chr03:027485544 0 W/27485544-27485544 FN545-S Single Base Substitution A-G INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN2583-S.SNP.3:27488528 chr03:027488528 0 W/27488528-27488528 FN2583-S SNP T -> A AC=1;AN=200;BQB=0.978652;DP=4467;DP4=2192,2064,20,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.70161e-24;MQSB=0.971472;RPB=0.227205;SGB=89.4038;VDB=0.414962;EFF=INTRON(MODIFIER||||1044|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.1|2|1),INTRON(MODIFIER||||774|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.3|2|1) FN3661-S.SNP.3:27493485 chr03:027493485 0 W/27493485-27493485 FN3661-S SNP A -> G AC=1;AN=190;BQB=0.441617;DP=2794;DP4=1290,1434,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.65048e-07;MQSB=0.935723;RPB=0.688526;SGB=32.5467;VDB=0.622197;EFF=INTRON(MODIFIER||||1044|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.1|9|1),INTRON(MODIFIER||||774|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.3|9|1) FN-3.SNP.3:27497932 chr03:027497932 0 W/27497932-27497932 FN-3 Single Base Substitution C-T INTRON Homo SNo: 3, Mutant_ID: FN-3, Generation: M2, Mutations: 22, Genes: 29, Seed availability: Yes. FN2724-S.SNP.3:27502209 chr03:027502209 0 W/27502209-27502209 FN2724-S SNP T -> C AC=1;AN=200;BQB=0.0844461;DP=4503;DP4=2141,2183,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222074;MQB=8.8622e-08;MQSB=0.99806;RPB=0.807422;SGB=-36.1052;VDB=0.902681;EFF=SPLICE_SITE_REGION(LOW||||1044|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.1|25|1),INTRON(MODIFIER||||1044|LOC_Os03g48300|protein_coding|CODING|LOC_Os03g48300.1|25|1) FN851-S.SNP.3:27511169 chr03:027511169 0 W/27511169-27511169 FN851-S Single Base Substitution T-C INTRON HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN854-S.SNP.3:27517358 chr03:027517358 0 W/27517358-27517358 FN854-S Single Base Substitution G-A INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN347-S.SNP.3:27524491 chr03:027524491 0 W/27524491-27524491 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN573-S.SNP.3:27540360 chr03:027540360 0 W/27540360-27540360 FN573-S Single Base Substitution T-C INTRON HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3389-S.SNP.3:27547311 chr03:027547311 0 W/27547311-27547311 FN3389-S SNP T -> C AC=1;AN=184;BQB=0.988147;DP=2219;DP4=1023,1128,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000171481;MQSB=0.964622;RPB=0.452394;SGB=39.699;VDB=0.878682;EFF=INTRON(MODIFIER||||477|LOC_Os03g48380|protein_coding|CODING|LOC_Os03g48380.1|10|1) FN4203-S.SNP.3:27551893 chr03:027551893 0 W/27551893-27551893 FN4203-S SNP C -> G AC=2;AN=170;BQB=0.687586;DP=2313;DP4=1264,936,23,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.50848e-20;MQSB=0.997927;RPB=0.968587;SGB=150.383;VDB=0.0880933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.3:27559385 chr03:027559385 0 W/27559385-27559385 FN1115-S Single Base Substitution C-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN516-S.SNP.3:27564530 chr03:027564530 0 W/27564530-27564530 FN516-S Single Base Substitution C-T INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN425-S.SNP.3:27593594 chr03:027593594 0 W/27593594-27593594 FN425-S Single Base Substitution T-C INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1533-S.SNP.3:27595191 chr03:027595191 0 W/27595191-27595191 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1427-S.SNP.3:27608333 chr03:027608333 0 W/27608333-27608333 FN1427-S Single Base Substitution T-A INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN-222.SNP.3:27621966 chr03:027621966 0 W/27621966-27621966 FN-222 Single Base Substitution T-A INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-222.SNP.3:27622061 chr03:027622061 0 W/27622061-27622061 FN-222 Single Base Substitution C-T INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3446-S.SNP.3:27622888 chr03:027622888 0 W/27622888-27622888 FN3446-S SNP T -> A AC=1;AN=184;BQB=0.991231;DP=2881;DP4=1221,1549,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13532e-06;MQSB=0.925266;RPB=0.956815;SGB=48.7425;VDB=0.746961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.3:27624056 chr03:027624056 0 W/27624056-27624056 FN2541-S SNP G -> A AC=2;AN=198;BQB=0.0120065;DP=3961;DP4=1775,1840,21,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.61968e-15;MQSB=0.0236278;RPB=0.847329;SGB=140.812;VDB=0.199875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.3:27624294 chr03:027624294 0 W/27624294-27624294 FN1673-S SNP G -> A AC=1;AN=188;BQB=0.599403;DP=2370;DP4=1357,982,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.61575e-07;MQSB=0.992521;RPB=0.990846;SGB=-14.4565;VDB=0.071376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.3:27626922 chr03:027626922 0 W/27626922-27626922 FN1069-S Single Base Substitution A-G INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1586-S.SNP.3:27636276 chr03:027636276 0 W/27636276-27636276 FN1586-S Single Base Substitution T-C INTERGENIC Homo SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2564-S.SNP.3:27638087 chr03:027638087 0 W/27638087-27638087 FN2564-S SNP T -> C AC=1;AN=198;BQB=0.628932;DP=4120;DP4=1653,2285,2,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.43235e-05;MQSB=0.985355;RPB=0.819103;SGB=26.5745;VDB=0.724891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.3:27649865 chr03:027649865 0 W/27649865-27649865 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.896815;DP=3078;DP4=1268,1709,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00416e-08;MQSB=0.971977;RPB=0.564384;SGB=35.7479;VDB=0.267187;EFF=INTERGENIC(MODIFIER||||||||||1) FN-51.SNP.3:27655204 chr03:027655204 0 W/27655204-27655204 FN-51 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g48490 centromere protein, putative, expressed SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.3:27655204 chr03:027655204 0 W/27655204-27655204 FN-51 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os03g48490 centromere protein, putative, expressed SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN4311-S.SNP.3:27658548 chr03:027658548 0 W/27658548-27658548 FN4311-S SNP T -> A AC=1;AN=170;BQB=0.944839;DP=2499;DP4=1257,1146,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.63182e-08;MQSB=0.792947;RPB=0.970958;SGB=34.878;VDB=0.824937;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P1237|1515|LOC_Os03g48490|protein_coding|CODING|LOC_Os03g48490.1|8|1) FN3511-S.SNP.3:27659765 chr03:027659765 0 W/27659765-27659765 FN3511-S SNP T -> A AC=2;AN=188;BQB=0.157005;DP=3218;DP4=1217,1645,12,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.67407e-07;MQSB=0.854126;RPB=0.928329;SGB=-121.349;VDB=0.805091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.3:27667838 chr03:027667838 0 W/27667838-27667838 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.877636;DP=3530;DP4=2176,1116,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.27018e-18;MQSB=0.99237;RPB=0.604341;SGB=101.557;VDB=0.612846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.3:27670765 chr03:027670765 0 W/27670765-27670765 FN2670-S SNP A -> T AC=1;AN=200;BQB=0.929619;DP=5179;DP4=2382,2544,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.15542e-18;MQSB=0.962677;RPB=0.823578;SGB=63.3521;VDB=0.153732;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P265|698|LOC_Os03g48540|protein_coding|CODING|LOC_Os03g48540.1|3|1) FN1006-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN1006-S Single Base Substitution C-T INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2395.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN2395 SNP C -> T AC=1;AN=200;BQB=0.624374;DP=5062;DP4=2533,2262,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000395101;MQB=3.04251e-10;MQSB=0.405437;RPB=0.221809;SGB=69.1109;VDB=0.482884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN2579-S SNP C -> T AC=2;AN=198;BQB=0.942915;DP=4236;DP4=2111,1865,27,38;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.78923e-34;MQSB=0.369948;RPB=0.58753;SGB=176.253;VDB=0.995933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN2705-S SNP C -> T AC=1;AN=200;BQB=0.747825;DP=5053;DP4=2617,2162,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2981e-10;MQSB=0.933892;RPB=0.455382;SGB=51.0851;VDB=0.47161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN3297-S SNP C -> T AC=1;AN=184;BQB=0.484176;DP=3419;DP4=1515,1810,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.08286e-05;MQSB=2.13101e-05;RPB=0.904824;SGB=15.7097;VDB=0.973499;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN3919-S SNP C -> T AC=2;AN=158;BQB=0.34905;DP=2631;DP4=1108,1407,13,17;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000380084;MQB=9.47365e-09;MQSB=5.40091e-05;RPB=0.487584;SGB=125.717;VDB=0.320698;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.3:27675728 chr03:027675728 0 W/27675728-27675728 FN487-S Single Base Substitution C-T INTERGENIC HOMO SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2173-S.SNP.3:27676040 chr03:027676040 0 W/27676040-27676040 FN2173-S SNP T -> C AC=2;AN=168;BQB=0.0350406;DP=2317;DP4=1081,1160,14,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.87479e-08;MQSB=0.717323;RPB=0.983394;SGB=-108.339;VDB=0.881613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.3:27685356 chr03:027685356 0 W/27685356-27685356 FN1403-S Single Base Substitution T-C INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN809-S.SNP.3:27686161 chr03:027686161 0 W/27686161-27686161 FN809-S Single Base Substitution G-A INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN1468-S.SNP.3:27694354 chr03:027694354 0 W/27694354-27694354 FN1468-S Single Base Substitution T-C INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN946-S.SNP.3:27694968 chr03:027694968 0 W/27694968-27694968 FN946-S Single Base Substitution G-T INTERGENIC HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2673-S.SNP.3:27700727 chr03:027700727 0 W/27700727-27700727 FN2673-S SNP A -> T AC=1;AN=200;BQB=0.999156;DP=4930;DP4=2528,2182,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11344e-11;MQSB=0.351307;RPB=0.261952;SGB=61.9006;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.3:27704366 chr03:027704366 0 W/27704366-27704366 FN1438-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1152-S.SNP.3:27706070 chr03:027706070 0 W/27706070-27706070 FN1152-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g48600 domain of unknown function DUF966 domain containing protein, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1170-S.SNP.3:27715398 chr03:027715398 0 W/27715398-27715398 FN1170-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN4101-S.SNP.3:27722585 chr03:027722585 0 W/27722585-27722585 FN4101-S SNP G -> A AC=1;AN=182;BQB=0.945081;DP=2369;DP4=1193,1069,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.25678e-05;MQSB=0.903284;RPB=0.894469;SGB=18.0739;VDB=0.825542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.3:27727982 chr03:027727982 0 W/27727982-27727982 FN2106-S SNP A -> T AC=1;AN=168;BQB=0.0569779;DP=3574;DP4=1705,1826,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00064027;MQSB=0.997607;RPB=0.547044;SGB=-55.5147;VDB=0.00658367;EFF=INTRON(MODIFIER||||174|LOC_Os03g48626|protein_coding|CODING|LOC_Os03g48626.1|1|1) FN2178-S.SNP.3:27731676 chr03:027731676 0 W/27731676-27731676 FN2178-S SNP A -> T AC=2;AN=168;BQB=0.903593;DP=3933;DP4=1757,2113,21,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.50441e-26;MQSB=0.921746;RPB=0.891467;SGB=99.9709;VDB=0.193805;EFF=INTRON(MODIFIER||||71|LOC_Os03g48642|protein_coding|CODING|LOC_Os03g48642.1|1|1) FN4080-S.SNP.3:27731676 chr03:027731676 0 W/27731676-27731676 FN4080-S SNP A -> T AC=2;AN=182;BQB=0.993821;DP=3240;DP4=1737,1416,12,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.98255e-12;MQSB=0.98813;RPB=0.624647;SGB=89.2199;VDB=0.777573;EFF=INTRON(MODIFIER||||71|LOC_Os03g48642|protein_coding|CODING|LOC_Os03g48642.1|1|1) FN1339-S.SNP.3:27732387 chr03:027732387 0 W/27732387-27732387 FN1339-S Single Base Substitution C-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN4187-S.SNP.3:27743469 chr03:027743469 0 W/27743469-27743469 FN4187-S SNP A -> T AC=1;AN=170;BQB=0.81752;DP=2856;DP4=1414,1382,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.65723e-05;MQSB=0.997685;RPB=0.912124;SGB=31.4354;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.3:27746200 chr03:027746200 0 W/27746200-27746200 FN3696-S SNP C -> T AC=2;AN=190;BQB=0.966858;DP=2837;DP4=1336,1406,14,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.5247e-19;MQSB=0.999896;RPB=0.995611;SGB=103.624;VDB=0.58942;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q259*|1375|LOC_Os03g48674|protein_coding|CODING|LOC_Os03g48674.1|1|1);LOF=(LOC_Os03g48674|LOC_Os03g48674|1|1.00);NMD=(LOC_Os03g48674|LOC_Os03g48674|1|1.00) FN2593-S.SNP.3:27748220 chr03:027748220 0 W/27748220-27748220 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.939548;DP=4123;DP4=1992,1933,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.45856e-10;MQSB=0.962433;RPB=0.453306;SGB=26.7492;VDB=0.190985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R733K|1375|LOC_Os03g48674|protein_coding|CODING|LOC_Os03g48674.1|3|1) FN3326-S.SNP.3:27752737 chr03:027752737 0 W/27752737-27752737 FN3326-S SNP C -> T AC=2;AN=184;BQB=0.995651;DP=3490;DP4=1485,1865,15,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000286533;MQB=7.98056e-22;MQSB=0.994454;RPB=0.994337;SGB=73.7109;VDB=0.12043;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A511|660|LOC_Os03g48690|protein_coding|CODING|LOC_Os03g48690.1|8|1) FN4083-S.SNP.3:27753048 chr03:027753048 0 W/27753048-27753048 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.852016;DP=3240;DP4=1463,1658,16,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.0996e-16;MQSB=0.99727;RPB=0.88232;SGB=98.8232;VDB=0.870104;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V444|660|LOC_Os03g48690|protein_coding|CODING|LOC_Os03g48690.1|7|1) FN1367-S.SNP.3:27753694 chr03:027753694 0 W/27753694-27753694 FN1367-S Single Base Substitution C-G INTRON HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN2649-S.SNP.3:27760967 chr03:027760967 0 W/27760967-27760967 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.122884;DP=4520;DP4=1913,2223,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16171e-09;MQSB=0.486716;RPB=0.414876;SGB=91.1059;VDB=0.75928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.3:27769950 chr03:027769950 0 W/27769950-27769950 FN2114-S SNP A -> C AC=2;AN=168;BQB=0.000602778;DP=3789;DP4=2088,1639,25,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.97253e-21;MQSB=0.931671;RPB=0.682868;SGB=-5.89455;VDB=0.0677389;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.3:27775109 chr03:027775109 0 W/27775109-27775109 FN1309-S Single Base Substitution G-C INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN934-S.SNP.3:27779917 chr03:027779917 0 W/27779917-27779917 FN934-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g48750 Cupin domain containing protein, expressed SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1424-S.SNP.3:27780451 chr03:027780451 0 W/27780451-27780451 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3607-S.SNP.3:27785563 chr03:027785563 0 W/27785563-27785563 FN3607-S SNP G -> C AC=1;AN=190;BQB=0.955698;DP=2936;DP4=1437,1343,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.47606e-07;MQSB=0.930533;RPB=0.959449;SGB=44.5415;VDB=0.234932;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.3:27787263 chr03:027787263 0 W/27787263-27787263 FN-213 Single Base Substitution G-T INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2105-S.SNP.3:27793060 chr03:027793060 0 W/27793060-27793060 FN2105-S SNP C -> A AC=1;AN=168;BQB=0.776748;DP=3279;DP4=1589,1637,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=25;MQ0F=0.186947;MQB=0.999906;MQSB=0;RPB=0.812592;SGB=-72.7757;VDB=0.602444;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.3:27799123 chr03:027799123 0 W/27799123-27799123 FN931-S Single Base Substitution A-G INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2173-S.SNP.3:27799181 chr03:027799181 0 W/27799181-27799181 FN2173-S SNP G -> T AC=1;AN=168;BQB=0.289629;DP=2186;DP4=1179,988,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=18;MQ0F=0.283166;MQB=0.0213406;MQSB=5.74961e-28;RPB=0.918012;SGB=38.1788;VDB=0.6178;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.3:27820646 chr03:027820646 0 W/27820646-27820646 FN-298 Single Base Substitution C-T INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1156-XA21.SNP.3:27822326 chr03:027822326 0 W/27822326-27822326 FN1156-XA21 Single Base Substitution T-C INTRON Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3699-S.SNP.3:27828498 chr03:027828498 0 W/27828498-27828498 FN3699-S SNP C -> T AC=1;AN=190;BQB=0.160452;DP=3110;DP4=1541,1478,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.63128e-05;MQSB=0.578381;RPB=0.652478;SGB=67.3108;VDB=0.812692;EFF=INTRON(MODIFIER||||1054|LOC_Os03g48850|protein_coding|CODING|LOC_Os03g48850.1|7|1),INTRON(MODIFIER||||1054|LOC_Os03g48850|protein_coding|CODING|LOC_Os03g48850.2|7|1) FN4020-S.SNP.3:27833442 chr03:027833442 0 W/27833442-27833442 FN4020-S SNP T -> A AC=2;AN=168;BQB=0.96534;DP=2717;DP4=1484,1130,25,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.14679e-22;MQSB=0.986799;RPB=0.847933;SGB=117.088;VDB=0.923609;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P920|1054|LOC_Os03g48850|protein_coding|CODING|LOC_Os03g48850.1|19|1),SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P920|1054|LOC_Os03g48850|protein_coding|CODING|LOC_Os03g48850.2|19|1) FN3468-S.SNP.3:27838809 chr03:027838809 0 W/27838809-27838809 FN3468-S SNP G -> A AC=1;AN=184;BQB=0.997953;DP=3599;DP4=1866,1643,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.11751e-09;MQSB=0.999962;RPB=0.815959;SGB=25.7969;VDB=0.510842;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G378|508|LOC_Os03g48880|protein_coding|CODING|LOC_Os03g48880.1|1|1) FN3880-S.SNP.3:27841631 chr03:027841631 0 W/27841631-27841631 FN3880-S SNP C -> T AC=1;AN=158;BQB=0.344178;DP=2520;DP4=1053,1256,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.05627e-10;MQSB=0.97503;RPB=0.871274;SGB=-15.4297;VDB=0.524808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.3:27841637 chr03:027841637 0 W/27841637-27841637 FN3880-S SNP A -> T AC=1;AN=158;BQB=0.98398;DP=2569;DP4=1139,1351,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.36777e-09;MQSB=0.993864;RPB=0.818216;SGB=44.1818;VDB=0.127295;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.3:27842115 chr03:027842115 0 W/27842115-27842115 FN-397 Single Base Substitution C-T INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN3562-S.SNP.3:27847319 chr03:027847319 0 W/27847319-27847319 FN3562-S SNP G -> A AC=2;AN=188;BQB=0.606525;DP=3403;DP4=1221,2092,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.66519e-18;MQSB=0.99595;RPB=0.43726;SGB=85.5904;VDB=0.552653;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V89I|718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1) FN3562-S.SNP.3:27847320 chr03:027847320 0 W/27847320-27847320 FN3562-S SNP T -> A AC=2;AN=188;BQB=0.528935;DP=3398;DP4=1194,1947,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.82061e-17;MQSB=0.999838;RPB=0.139718;SGB=-41.0182;VDB=0.529817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V89D|718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1) FN3562-S.SNP.3:27847326 chr03:027847326 0 W/27847326-27847326 FN3562-S SNP G -> A AC=2;AN=188;BQB=0.999826;DP=3343;DP4=1169,2073,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.97274e-18;MQSB=0.99086;RPB=0.590012;SGB=117.128;VDB=0.659385;EFF=SPLICE_SITE_DONOR(HIGH||||718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1),INTRON(MODIFIER||||718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1);LOF=(LOC_Os03g48904|LOC_Os03g48904|1|1.00) FN3562-S.SNP.3:27847327 chr03:027847327 0 W/27847327-27847327 FN3562-S SNP T -> A AC=2;AN=188;BQB=0.975988;DP=3325;DP4=1092,1982,14,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.0297e-19;MQSB=0.999868;RPB=0.745835;SGB=27.1443;VDB=0.744394;EFF=SPLICE_SITE_DONOR(HIGH||||718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1),INTRON(MODIFIER||||718|LOC_Os03g48904|protein_coding|CODING|LOC_Os03g48904.1|2|1);LOF=(LOC_Os03g48904|LOC_Os03g48904|1|1.00) FN2106-S.SNP.3:27859243 chr03:027859243 0 W/27859243-27859243 FN2106-S SNP G -> A AC=1;AN=168;BQB=0.0734689;DP=4033;DP4=2075,1905,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.23717e-07;MQSB=0.847712;RPB=0.984927;SGB=-164.05;VDB=0.886403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P96L|212|LOC_Os03g48930|protein_coding|CODING|LOC_Os03g48930.1|3|1) FN3732-S.SNP.3:27883174 chr03:027883174 0 W/27883174-27883174 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.947227;DP=2620;DP4=947,1561,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000381679;MQB=8.09134e-08;MQSB=0.372862;RPB=0.734689;SGB=49.0954;VDB=0.431004;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.3:27887062 chr03:027887062 0 W/27887062-27887062 FN-246 Single Base Substitution T-A INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN467-S.SNP.3:27898195 chr03:027898195 0 W/27898195-27898195 FN467-S Single Base Substitution T-G INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN-269.SNP.3:27898508 chr03:027898508 0 W/27898508-27898508 FN-269 Single Base Substitution T-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1761-S.SNP.3:27903072 chr03:027903072 0 W/27903072-27903072 FN1761-S SNP C -> T AC=1;AN=188;BQB=0.969832;DP=4608;DP4=2346,2221,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.250868;MQB=0.0560574;MQSB=0;RPB=0.265553;SGB=74.9605;VDB=0.174583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V938I|1770|LOC_Os03g48990|protein_coding|CODING|LOC_Os03g48990.1|5|1) FN1650-S.SNP.3:27907261 chr03:027907261 0 W/27907261-27907261 FN1650-S Single Base Substitution G-A INTRON HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1679-S.SNP.3:27909180 chr03:027909180 0 W/27909180-27909180 FN1679-S SNP C -> T AC=1;AN=188;BQB=0.666682;DP=1549;DP4=1013,486,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00129116;MQB=0.0100401;MQSB=0.655335;RPB=0.864758;SGB=53.5223;VDB=0.346573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-30.SNP.3:27917629 chr03:027917629 0 W/27917629-27917629 FN-30 Single Base Substitution T-C INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2284.SNP.3:27927842 chr03:027927842 0 W/27927842-27927842 FN2284 SNP G -> A AC=2;AN=192;BQB=0.941212;DP=4873;DP4=2236,2357,14,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000205212;MQB=3.30984e-22;MQSB=0.998374;RPB=0.0804838;SGB=95.587;VDB=0.447022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.3:27928632 chr03:027928632 0 W/27928632-27928632 FN2463 SNP G -> C AC=2;AN=200;BQB=0.999982;DP=4826;DP4=2319,2166,16,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.60327e-19;MQSB=0.987473;RPB=0.540442;SGB=94.6142;VDB=0.369151;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.3:27933401 chr03:027933401 0 W/27933401-27933401 FN4068-S SNP T -> A AC=1;AN=182;BQB=0.953405;DP=2808;DP4=1478,1264,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.011396;MQB=4.37727e-09;MQSB=0.0874455;RPB=0.721966;SGB=71.1765;VDB=0.711838;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y460*|1092|LOC_Os03g49030|protein_coding|CODING|LOC_Os03g49030.1|1|1);LOF=(LOC_Os03g49030|LOC_Os03g49030|1|1.00);NMD=(LOC_Os03g49030|LOC_Os03g49030|1|1.00) FN3637-S.SNP.3:27934752 chr03:027934752 0 W/27934752-27934752 FN3637-S SNP G -> T AC=1;AN=190;BQB=0.960564;DP=2799;DP4=1431,1275,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0060736;MQB=0.250324;MQSB=0.383968;RPB=0.89254;SGB=35.4339;VDB=0.592572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D911Y|1092|LOC_Os03g49030|protein_coding|CODING|LOC_Os03g49030.1|1|1) FN909-S.SNP.3:27939509 chr03:027939509 0 W/27939509-27939509 FN909-S Single Base Substitution C-T INTRON HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN1046-S.SNP.3:27940619 chr03:027940619 0 W/27940619-27940619 FN1046-S Single Base Substitution G-C INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3659-S.SNP.3:27940733 chr03:027940733 0 W/27940733-27940733 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.969041;DP=2613;DP4=1031,1391,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00880214;MQB=7.02571e-06;MQSB=0.283304;RPB=0.719561;SGB=13.4442;VDB=0.950994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.3:27942215 chr03:027942215 0 W/27942215-27942215 FN2583-S SNP C -> T AC=1;AN=200;BQB=1;DP=4741;DP4=2281,2181,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.3926e-20;MQSB=0.786022;RPB=0.966815;SGB=105.163;VDB=0.130724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.3:27947795 chr03:027947795 0 W/27947795-27947795 FN3918-S SNP C -> T AC=2;AN=158;BQB=0.885592;DP=2143;DP4=1016,1032,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.97754e-12;MQSB=0.999975;RPB=0.78512;SGB=82.0227;VDB=0.345226;EFF=INTRON(MODIFIER||||343|LOC_Os03g49050|protein_coding|CODING|LOC_Os03g49050.1|7|1) FN2627-S.SNP.3:27948318 chr03:027948318 0 W/27948318-27948318 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.821065;DP=5036;DP4=2281,2524,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.51168e-12;MQSB=0.914352;RPB=0.838135;SGB=81.8956;VDB=0.858167;EFF=INTRON(MODIFIER||||343|LOC_Os03g49050|protein_coding|CODING|LOC_Os03g49050.1|8|1) FN1202-S.SNP.3:27953982 chr03:027953982 0 W/27953982-27953982 FN1202-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN4037-S.SNP.3:27956098 chr03:027956098 0 W/27956098-27956098 FN4037-S SNP C -> A AC=1;AN=168;BQB=0.8141;DP=2915;DP4=1452,1359,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.02032e-08;MQSB=0.997144;RPB=0.966666;SGB=74.3269;VDB=0.101298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T120N|671|LOC_Os03g49070|protein_coding|CODING|LOC_Os03g49070.1|1|1) FN1272-S.SNP.3:27956670 chr03:027956670 0 W/27956670-27956670 FN1272-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g49070 expressed protein SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1471-S.SNP.3:27961932 chr03:027961932 0 W/27961932-27961932 FN1471-S SNP G -> C AC=1;AN=188;BQB=0.647069;DP=3290;DP4=1303,1947,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00759878;MQB=0.00512011;MQSB=0.000276703;RPB=0.324047;SGB=-10.6534;VDB=0.17702;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.3:27962051 chr03:027962051 0 W/27962051-27962051 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2206-S.SNP.3:27963684 chr03:027963684 0 W/27963684-27963684 FN2206-S SNP A -> T AC=2;AN=190;BQB=0.847769;DP=5513;DP4=2783,2371,19,11;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.016325;MQB=0.015997;MQSB=6.61961e-20;RPB=0.968725;SGB=-7.12933;VDB=0.230305;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.3:27964385 chr03:027964385 0 W/27964385-27964385 W138-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3488-S.SNP.3:27965872 chr03:027965872 0 W/27965872-27965872 FN3488-S SNP G -> A AC=2;AN=184;BQB=0.956696;DP=3450;DP4=1764,1598,16,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.04318e-14;MQSB=0.905982;RPB=0.388351;SGB=107.526;VDB=0.477373;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S329|711|LOC_Os03g49090|protein_coding|CODING|LOC_Os03g49090.1|2|1) FN1446-S.SNP.3:27979379 chr03:027979379 0 W/27979379-27979379 FN1446-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN-333.SNP.3:27980559 chr03:027980559 0 W/27980559-27980559 FN-333 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g49120 transposon protein, putative, unclassified, expressed SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN3658-S.SNP.3:27980818 chr03:027980818 0 W/27980818-27980818 FN3658-S SNP C -> A AC=1;AN=190;BQB=0.839593;DP=2937;DP4=1340,1502,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0446033;MQB=0.944293;MQSB=1.06145e-18;RPB=0.989853;SGB=36.1006;VDB=0.836523;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y1322*|1527|LOC_Os03g49120|protein_coding|CODING|LOC_Os03g49120.1|6|1);LOF=(LOC_Os03g49120|LOC_Os03g49120|1|1.00);NMD=(LOC_Os03g49120|LOC_Os03g49120|1|1.00) FN2535-S.SNP.3:27981856 chr03:027981856 0 W/27981856-27981856 FN2535-S SNP C -> T AC=2;AN=198;BQB=0.706745;DP=4154;DP4=1962,2025,16,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00240732;MQB=9.19921e-17;MQSB=0.409045;RPB=0.889337;SGB=101.266;VDB=0.126933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R1493C|1527|LOC_Os03g49120|protein_coding|CODING|LOC_Os03g49120.1|9|1) FN2215-S.SNP.3:27982763 chr03:027982763 0 W/27982763-27982763 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.263513;DP=4815;DP4=1955,2595,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00311526;MQB=1.55546e-07;MQSB=0.0122935;RPB=0.981007;SGB=36.4291;VDB=0.766705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.3:27991797 chr03:027991797 0 W/27991797-27991797 FN1251-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-155.SNP.3:27995213 chr03:027995213 0 W/27995213-27995213 FN-155 Single Base Substitution T-A INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1755-S.SNP.3:27996949 chr03:027996949 0 W/27996949-27996949 FN1755-S SNP A -> C AC=2;AN=188;BQB=0.119413;DP=3660;DP4=1481,2108,24,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.7605e-18;MQSB=0.998168;RPB=0.80172;SGB=167.086;VDB=0.39592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.3:27998939 chr03:027998939 0 W/27998939-27998939 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.857354;DP=4942;DP4=2445,2252,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.75856e-09;MQSB=0.977832;RPB=0.257015;SGB=47.4799;VDB=0.755869;EFF=INTRON(MODIFIER||||129|LOC_Os03g49150|protein_coding|CODING|LOC_Os03g49150.1|2|1),INTRON(MODIFIER||||63|LOC_Os03g49150|protein_coding|CODING|LOC_Os03g49150.2|2|1) FN980-S.SNP.3:28000086 chr03:028000086 0 W/28000086-28000086 FN980-S Single Base Substitution C-G INTRON HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN902-S.SNP.3:28003447 chr03:028003447 0 W/28003447-28003447 FN902-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g49160 expressed protein SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3951-S.SNP.3:28011314 chr03:028011314 0 W/28011314-28011314 FN3951-S SNP C -> T AC=2;AN=168;BQB=0.914133;DP=2568;DP4=1212,1246,22,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.92285e-21;MQSB=0.995005;RPB=0.67303;SGB=117.088;VDB=0.20997;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R675W|764|LOC_Os03g49170|protein_coding|CODING|LOC_Os03g49170.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R660W|749|LOC_Os03g49170|protein_coding|CODING|LOC_Os03g49170.3|2|1) FN454-S.SNP.3:28012560 chr03:028012560 0 W/28012560-28012560 FN454-S Single Base Substitution T-C INTERGENIC HOMO SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN748-S.SNP.3:28013888 chr03:028013888 0 W/28013888-28013888 FN748-S Single Base Substitution C-T INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1379-S.SNP.3:28013903 chr03:028013903 0 W/28013903-28013903 FN1379-S Single Base Substitution C-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1394-S.SNP.3:28013903 chr03:028013903 0 W/28013903-28013903 FN1394-S Single Base Substitution C-A INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN4206-S.SNP.3:28013903 chr03:028013903 0 W/28013903-28013903 FN4206-S SNP C -> A AC=2;AN=170;BQB=0.936962;DP=2011;DP4=704,1229,4,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.00638e-09;MQSB=0.86856;RPB=0.94501;SGB=45.206;VDB=0.98402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.3:28020159 chr03:028020159 0 W/28020159-28020159 FN1711-S SNP T -> C AC=2;AN=188;BQB=0.642936;DP=3660;DP4=1994,1595,29,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.63708e-24;MQSB=0.985573;RPB=0.0257867;SGB=-105.604;VDB=0.218547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.3:28021662 chr03:028021662 0 W/28021662-28021662 FN2350 SNP C -> A AC=1;AN=192;BQB=0.636661;DP=4951;DP4=2218,2493,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.92609e-08;MQSB=0.998132;RPB=0.917368;SGB=36.2157;VDB=0.223892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.3:28021808 chr03:028021808 0 W/28021808-28021808 FN1170-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3837-S.SNP.3:28034291 chr03:028034291 0 W/28034291-28034291 FN3837-S SNP G -> A AC=1;AN=190;BQB=0.983516;DP=2447;DP4=1240,1120,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04065e-05;MQSB=0.972048;RPB=0.93752;SGB=30.8803;VDB=0.700218;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S535N|604|LOC_Os03g49210|protein_coding|CODING|LOC_Os03g49210.1|13|1) FN-63.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN-63 Single Base Substitution G-A INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1128-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN1128-S Single Base Substitution G-A INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1334-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN1334-S Single Base Substitution G-A INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1368-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1490-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN1490-S Single Base Substitution G-A INTERGENIC Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN1748-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN1748-S SNP G -> A AC=2;AN=188;BQB=0.153389;DP=4001;DP4=2082,1861,23,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.6699e-17;MQSB=0.872426;RPB=0.0128212;SGB=-95.4067;VDB=0.913518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN2230-S SNP G -> A AC=2;AN=190;BQB=0.73585;DP=5425;DP4=2539,2428,29,49;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000368664;MQB=3.70805e-39;MQSB=0.0732273;RPB=0.880619;SGB=19.4568;VDB=0.290369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN2318 SNP G -> A AC=2;AN=192;BQB=0.998171;DP=5377;DP4=2503,2460,21,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000185977;MQB=3.4331e-23;MQSB=0.57807;RPB=0.479689;SGB=48.0279;VDB=0.349288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN2480 SNP G -> A AC=2;AN=200;BQB=0.952952;DP=5430;DP4=2547,2523,13,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90611e-15;MQSB=0.436947;RPB=0.468228;SGB=55.5366;VDB=0.011574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN3331-S SNP G -> A AC=2;AN=184;BQB=0.999939;DP=2970;DP4=1295,1420,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.17093e-14;MQSB=0.99919;RPB=0.94854;SGB=81.5311;VDB=0.948912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN3501-S SNP G -> A AC=2;AN=188;BQB=0.964344;DP=2892;DP4=1263,1455,8,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.08787e-09;MQSB=0.9433;RPB=0.920631;SGB=80.782;VDB=0.930789;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN354-S Single Base Substitution G-A INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3762-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN3762-S SNP G -> A AC=2;AN=190;BQB=0.874145;DP=2957;DP4=1382,1349,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.33058e-11;MQSB=0.994495;RPB=0.342513;SGB=50.3161;VDB=0.236607;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN3915-S SNP G -> A AC=2;AN=158;BQB=0.871869;DP=2726;DP4=1230,1285,11,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.39028e-13;MQSB=0.999997;RPB=0.998557;SGB=77.8763;VDB=0.65921;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN4031-S SNP G -> A AC=2;AN=168;BQB=0.999697;DP=2882;DP4=1296,1354,19,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.35842e-20;MQSB=0.972641;RPB=0.77017;SGB=171.805;VDB=0.748909;EFF=INTERGENIC(MODIFIER||||||||||1) FN707-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN707-S Single Base Substitution G-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN925-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN925-S Single Base Substitution G-A INTERGENIC HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN969-S.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 FN969-S Single Base Substitution G-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. W466-5-1.SNP.3:28043010 chr03:028043010 0 W/28043010-28043010 W466-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1156-XA21.SNP.3:28044625 chr03:028044625 0 W/28044625-28044625 FN1156-XA21 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN4144-S.SNP.3:28057138 chr03:028057138 0 W/28057138-28057138 FN4144-S SNP C -> T AC=1;AN=170;BQB=0.960511;DP=2135;DP4=721,1318,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.42257e-08;MQSB=0.227132;RPB=0.12594;SGB=52.3148;VDB=0.680595;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.3:28060821 chr03:028060821 0 W/28060821-28060821 FN-90 Single Base Substitution C-T INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN681-S.SNP.3:28063051 chr03:028063051 0 W/28063051-28063051 FN681-S Single Base Substitution G-A INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2167-S.SNP.3:28073539 chr03:028073539 0 W/28073539-28073539 FN2167-S SNP C -> A AC=1;AN=168;BQB=0.000641662;DP=4136;DP4=2018,2070,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.38955e-05;MQSB=0.999994;RPB=0.93241;SGB=-159.481;VDB=0.0708097;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.3:28075210 chr03:028075210 0 W/28075210-28075210 FN_543-2-6 Single Base Substitution C-G HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1075-S.SNP.3:28083227 chr03:028083227 0 W/28083227-28083227 FN1075-S Single Base Substitution G-C INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN405-S.SNP.3:28083227 chr03:028083227 0 W/28083227-28083227 FN405-S Single Base Substitution G-C INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN589-S.SNP.3:28083227 chr03:028083227 0 W/28083227-28083227 FN589-S Single Base Substitution G-C INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3731-S.SNP.3:28083384 chr03:028083384 0 W/28083384-28083384 FN3731-S SNP C -> T AC=1;AN=190;BQB=0.992366;DP=2763;DP4=1306,1360,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.0173724;MQB=0.943206;MQSB=0;RPB=0.943485;SGB=58.2031;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.3:28090576 chr03:028090576 0 W/28090576-28090576 FN990-S Single Base Substitution C-T INTERGENIC HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2196-S.SNP.3:28096542 chr03:028096542 0 W/28096542-28096542 FN2196-S SNP A -> T AC=1;AN=190;BQB=0.878641;DP=4872;DP4=2469,1926,18,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.62675e-21;MQSB=0.986219;RPB=0.266545;SGB=-2.69832;VDB=0.509905;EFF=SPLICE_SITE_REGION(LOW||||569|LOC_Os03g49360|protein_coding|CODING|LOC_Os03g49360.1|3|1),INTRON(MODIFIER||||569|LOC_Os03g49360|protein_coding|CODING|LOC_Os03g49360.1|3|1) FN3849-S.SNP.3:28099495 chr03:028099495 0 W/28099495-28099495 FN3849-S SNP T -> C AC=1;AN=158;BQB=0.992681;DP=2656;DP4=1208,1293,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.25166e-08;MQSB=0.952111;RPB=0.876711;SGB=60.1755;VDB=0.230248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.3:28100038 chr03:028100038 0 W/28100038-28100038 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.988619;DP=2966;DP4=1377,1496,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05906e-09;MQSB=0.994612;RPB=0.92827;SGB=71.3514;VDB=0.149105;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.3:28109020 chr03:028109020 0 W/28109020-28109020 FN-174 Single Base Substitution G-A INTRON HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3888-S.SNP.3:28111514 chr03:028111514 0 W/28111514-28111514 FN3888-S SNP A -> G AC=1;AN=158;BQB=0.729883;DP=2726;DP4=1585,1019,10,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.36365e-12;MQSB=0.97407;RPB=0.954404;SGB=74.5068;VDB=0.438608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K429R|877|LOC_Os03g49380|protein_coding|CODING|LOC_Os03g49380.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K339R|493|LOC_Os03g49380|protein_coding|CODING|LOC_Os03g49380.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K11R|459|LOC_Os03g49380|protein_coding|CODING|LOC_Os03g49380.3|2|1) FN3858-S.SNP.3:28116517 chr03:028116517 0 W/28116517-28116517 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.883238;DP=2564;DP4=1409,1026,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.97949e-09;MQSB=0.845877;RPB=0.189956;SGB=44.1818;VDB=0.0297528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.3:28118683 chr03:028118683 0 W/28118683-28118683 FN2204-S SNP A -> G AC=1;AN=190;BQB=0.343393;DP=5204;DP4=2053,2606,15,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.83745e-20;MQSB=0.917825;RPB=0.828896;SGB=144.727;VDB=0.396741;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G207|1299|LOC_Os03g49400|protein_coding|CODING|LOC_Os03g49400.1|4|1) FN-162.SNP.3:28122786 chr03:028122786 0 W/28122786-28122786 FN-162 Single Base Substitution A-T INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN3569-S.SNP.3:28124398 chr03:028124398 0 W/28124398-28124398 FN3569-S SNP A -> G AC=1;AN=188;BQB=0.988318;DP=3119;DP4=1347,1670,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.51551e-07;MQSB=0.937683;RPB=0.350854;SGB=32.441;VDB=0.445609;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.3:28125998 chr03:028125998 0 W/28125998-28125998 FN2450 SNP G -> T AC=1;AN=200;BQB=0.850612;DP=4347;DP4=2042,1850,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000230044;MQB=6.78047e-06;MQSB=0.905168;RPB=0.766453;SGB=45.0543;VDB=0.835732;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R47|127|LOC_Os03g49410|protein_coding|CODING|LOC_Os03g49410.1|1|1) FN4106-S.SNP.3:28127535 chr03:028127535 0 W/28127535-28127535 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.999237;DP=3195;DP4=1480,1589,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.66023e-06;MQSB=0.868411;RPB=0.335102;SGB=44.1115;VDB=0.0542847;EFF=INTERGENIC(MODIFIER||||||||||1) FN-396.SNP.3:28129304 chr03:028129304 0 W/28129304-28129304 FN-396 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g49420 HEAT repeat family protein, putative, expressed SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2267-S.SNP.3:28133823 chr03:028133823 0 W/28133823-28133823 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.992621;DP=4753;DP4=2341,2113,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83336e-08;MQSB=0.996064;RPB=0.300435;SGB=28.7675;VDB=0.13776;EFF=INTRON(MODIFIER||||1114|LOC_Os03g49420|protein_coding|CODING|LOC_Os03g49420.1|11|1),INTRON(MODIFIER||||1038|LOC_Os03g49420|protein_coding|CODING|LOC_Os03g49420.2|11|1),INTRON(MODIFIER||||228|LOC_Os03g49420|protein_coding|CODING|LOC_Os03g49420.4|1|1) FN4230-S.SNP.3:28139433 chr03:028139433 0 W/28139433-28139433 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.949489;DP=2727;DP4=1408,1269,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.3549e-08;MQSB=0.940664;RPB=0.413257;SGB=47.8722;VDB=0.950728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A434V|501|LOC_Os03g49430|protein_coding|CODING|LOC_Os03g49430.1|2|1),UTR_3_PRIME(MODIFIER||916||375|LOC_Os03g49430|protein_coding|CODING|LOC_Os03g49430.4|3|1),UTR_3_PRIME(MODIFIER||1367||320|LOC_Os03g49430|protein_coding|CODING|LOC_Os03g49430.3|1|1) FN419-S.SNP.3:28142236 chr03:028142236 0 W/28142236-28142236 FN419-S Single Base Substitution G-A INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN4072-S.SNP.3:28146892 chr03:028146892 0 W/28146892-28146892 FN4072-S SNP G -> A AC=2;AN=182;BQB=0.90717;DP=3358;DP4=2008,1184,14,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.27642e-14;MQSB=0.993519;RPB=0.188484;SGB=43.231;VDB=0.887158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.3:28148469 chr03:028148469 0 W/28148469-28148469 FN1277-S Single Base Substitution A-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN-61.SNP.3:28157755 chr03:028157755 0 W/28157755-28157755 FN-61 Single Base Substitution T-G INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1037-S.SNP.3:28161928 chr03:028161928 0 W/28161928-28161928 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1102-S.SNP.3:28161928 chr03:028161928 0 W/28161928-28161928 FN1102-S Single Base Substitution G-A INTERGENIC HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN503-S.SNP.3:28161928 chr03:028161928 0 W/28161928-28161928 FN503-S Single Base Substitution G-A INTERGENIC HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN731-S.SNP.3:28165344 chr03:028165344 0 W/28165344-28165344 FN731-S Single Base Substitution A-G INTRON HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2595-S.SNP.3:28167607 chr03:028167607 0 W/28167607-28167607 FN2595-S SNP A -> G AC=1;AN=198;BQB=0.279567;DP=4316;DP4=2086,2042,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.77784e-06;MQSB=7.33867e-06;RPB=0.946874;SGB=50.9344;VDB=0.420885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.3:28169116 chr03:028169116 0 W/28169116-28169116 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.0262099;DP=2494;DP4=1073,1119,16,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000801925;MQB=0.000291621;MQSB=0.261119;RPB=0.716527;SGB=-38.5317;VDB=0.931276;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.3:28172466 chr03:028172466 0 W/28172466-28172466 FN_798-4-2 Single Base Substitution A-T Homo LOC_Os03g49500 ethylene receptor, putative, expressed SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN1116-S.SNP.3:28175439 chr03:028175439 0 W/28175439-28175439 FN1116-S Single Base Substitution C-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3446-S.SNP.3:28179318 chr03:028179318 0 W/28179318-28179318 FN3446-S SNP T -> G AC=2;AN=184;BQB=0.956828;DP=2284;DP4=1018,1089,19,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.65046e-13;MQSB=0.0884737;RPB=0.81017;SGB=-7.93076;VDB=0.66335;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.3:28183380 chr03:028183380 0 W/28183380-28183380 FN942-S Single Base Substitution A-C INTRON HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN1220-S.SNP.3:28186084 chr03:028186084 0 W/28186084-28186084 FN1220-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-252.SNP.3:28187453 chr03:028187453 0 W/28187453-28187453 FN-252 Single Base Substitution C-A INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2282.SNP.3:28192187 chr03:028192187 0 W/28192187-28192187 FN2282 SNP C -> T AC=1;AN=192;BQB=0.0998021;DP=5073;DP4=2289,2305,23,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.60618e-16;MQSB=0.547838;RPB=0.992218;SGB=-86.0356;VDB=0.457123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.3:28198603 chr03:028198603 0 W/28198603-28198603 FN2351 SNP T -> A AC=1;AN=192;BQB=0.718187;DP=4878;DP4=2275,2337,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205002;MQB=4.11439e-15;MQSB=0.106258;RPB=0.981554;SGB=117.676;VDB=0.832685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.3:28200544 chr03:028200544 0 W/28200544-28200544 FN-189 Single Base Substitution C-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1280-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN1280-S Single Base Substitution C-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2544-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN2544-S SNP C -> T AC=2;AN=198;BQB=0.864201;DP=4416;DP4=2093,2117,20,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.53261e-17;MQSB=0.244152;RPB=0.650502;SGB=81.2467;VDB=0.91547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.88716;DP=3501;DP4=1918,1455,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.58002e-16;MQSB=0.0246789;RPB=0.61331;SGB=116.749;VDB=0.28274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.999723;DP=3104;DP4=1462,1501,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7241e-13;MQSB=0.102537;RPB=0.583329;SGB=46.6446;VDB=0.543918;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN926-S Single Base Substitution C-T INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN984-S.SNP.3:28216393 chr03:028216393 0 W/28216393-28216393 FN984-S Single Base Substitution C-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1186-S.SNP.3:28218292 chr03:028218292 0 W/28218292-28218292 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN3998-S.SNP.3:28218748 chr03:028218748 0 W/28218748-28218748 FN3998-S SNP C -> A AC=2;AN=168;BQB=0.948189;DP=2367;DP4=1261,988,9,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.12339e-11;MQSB=0.991498;RPB=0.989565;SGB=34.3388;VDB=0.751196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.3:28220534 chr03:028220534 0 W/28220534-28220534 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.847099;DP=3840;DP4=1863,1785,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000879076;MQSB=0.86618;RPB=0.693347;SGB=22.1736;VDB=0.163984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G259D|472|LOC_Os03g49550|protein_coding|CODING|LOC_Os03g49550.1|1|1) FN549-S.SNP.3:28226715 chr03:028226715 0 W/28226715-28226715 FN549-S Single Base Substitution G-C INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN1748-S.SNP.3:28228334 chr03:028228334 0 W/28228334-28228334 FN1748-S SNP A -> G AC=2;AN=188;BQB=0.985914;DP=4174;DP4=2157,1952,37,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.65603e-28;MQSB=0.980617;RPB=0.931363;SGB=64.1834;VDB=0.689567;EFF=INTERGENIC(MODIFIER||||||||||1) FN-374.SNP.3:28231254 chr03:028231254 0 W/28231254-28231254 FN-374 Single Base Substitution T-C INTRON HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN-409.SNP.3:28233086 chr03:028233086 0 W/28233086-28233086 FN-409 Single Base Substitution T-C INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN728-S.SNP.3:28239725 chr03:028239725 0 W/28239725-28239725 FN728-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2719-S.SNP.3:28243792 chr03:028243792 0 W/28243792-28243792 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.972455;DP=4809;DP4=2065,2457,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.94535e-13;MQSB=0.913929;RPB=0.982517;SGB=86.5007;VDB=0.622148;EFF=INTRON(MODIFIER||||400|LOC_Os03g49600|protein_coding|CODING|LOC_Os03g49600.2|2|1),INTRON(MODIFIER||||504|LOC_Os03g49600|protein_coding|CODING|LOC_Os03g49600.1|2|1),INTRON(MODIFIER||||393|LOC_Os03g49600|protein_coding|CODING|LOC_Os03g49600.3|2|1),INTRON(MODIFIER||||387|LOC_Os03g49600|protein_coding|CODING|LOC_Os03g49600.4|2|1),INTRON(MODIFIER||||298|LOC_Os03g49600|protein_coding|CODING|LOC_Os03g49600.5|2|1) FN1726-S.SNP.3:28248556 chr03:028248556 0 W/28248556-28248556 FN1726-S SNP C -> T AC=1;AN=188;BQB=0.031937;DP=3284;DP4=1618,1605,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.05089e-07;MQSB=0.985037;RPB=0.985782;SGB=-139.973;VDB=0.220917;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.3:28252217 chr03:028252217 0 W/28252217-28252217 FN-61 Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1273-S.SNP.3:28257341 chr03:028257341 0 W/28257341-28257341 FN1273-S Single Base Substitution G-C STOP_GAINED HET LOC_Os03g49620 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1313-S.SNP.3:28265334 chr03:028265334 0 W/28265334-28265334 FN1313-S Single Base Substitution G-A INTRON HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN4096-S.SNP.3:28265334 chr03:028265334 0 W/28265334-28265334 FN4096-S SNP G -> A AC=2;AN=182;BQB=0.999069;DP=3022;DP4=1499,1441,9,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.83872e-11;MQSB=0.896704;RPB=0.243068;SGB=49.6712;VDB=0.0829702;EFF=INTRON(MODIFIER||||541|LOC_Os03g49630|protein_coding|CODING|LOC_Os03g49630.1|1|1),INTRON(MODIFIER||||540|LOC_Os03g49630|protein_coding|CODING|LOC_Os03g49630.2|1|1) FN995-S.SNP.3:28265334 chr03:028265334 0 W/28265334-28265334 FN995-S Single Base Substitution G-A INTRON HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1368-S.SNP.3:28267204 chr03:028267204 0 W/28267204-28267204 FN1368-S Single Base Substitution A-C INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1737-S.SNP.3:28268515 chr03:028268515 0 W/28268515-28268515 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.536112;DP=3888;DP4=1900,1927,17,21;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000771605;MQB=3.39489e-11;MQSB=1.66586e-08;RPB=0.603501;SGB=-300.813;VDB=0.556775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.3:28272979 chr03:028272979 0 W/28272979-28272979 FN3809-S SNP C -> T AC=2;AN=190;BQB=0.36738;DP=2607;DP4=1282,1233,14,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.41323e-10;MQSB=0.972223;RPB=0.961509;SGB=36.4291;VDB=0.237122;EFF=INTRON(MODIFIER||||654|LOC_Os03g49640|protein_coding|CODING|LOC_Os03g49640.1|1|1),INTRON(MODIFIER||||654|LOC_Os03g49640|protein_coding|CODING|LOC_Os03g49640.2|1|1) FN432-S.SNP.3:28273651 chr03:028273651 0 W/28273651-28273651 FN432-S Single Base Substitution G-T INTRON HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2708-S.SNP.3:28274552 chr03:028274552 0 W/28274552-28274552 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.137969;DP=5153;DP4=2586,2241,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.30176e-13;MQSB=0.939794;RPB=0.982542;SGB=47.7211;VDB=0.27927;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L332|654|LOC_Os03g49640|protein_coding|CODING|LOC_Os03g49640.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L332|654|LOC_Os03g49640|protein_coding|CODING|LOC_Os03g49640.2|1|1) FN1023-S.SNP.3:28275953 chr03:028275953 0 W/28275953-28275953 FN1023-S Single Base Substitution T-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN518-S.SNP.3:28278108 chr03:028278108 0 W/28278108-28278108 FN518-S Single Base Substitution A-G INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2625-S.SNP.3:28280968 chr03:028280968 0 W/28280968-28280968 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.172356;DP=5017;DP4=2447,2339,17,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00239187;MQB=1.26569e-08;MQSB=0.0912932;RPB=0.488434;SGB=101.557;VDB=0.473953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I1152V|1318|LOC_Os03g49660|protein_coding|CODING|LOC_Os03g49660.1|4|1) FN2724-S.SNP.3:28285990 chr03:028285990 0 W/28285990-28285990 FN2724-S SNP G -> A AC=1;AN=200;BQB=0.949052;DP=5071;DP4=2204,2599,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14063e-14;MQSB=0.982068;RPB=0.947227;SGB=109.527;VDB=0.860504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3488-S.SNP.3:28291214 chr03:028291214 0 W/28291214-28291214 FN3488-S SNP G -> A AC=2;AN=184;BQB=0.829803;DP=3433;DP4=1813,1502,16,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.47628e-19;MQSB=0.997568;RPB=0.547268;SGB=152.744;VDB=0.912883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.3:28291739 chr03:028291739 0 W/28291739-28291739 FN-173 Single Base Substitution T-G INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN798-S.SNP.3:28292237 chr03:028292237 0 W/28292237-28292237 FN798-S Single Base Substitution C-A INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3613-S.SNP.3:28294383 chr03:028294383 0 W/28294383-28294383 FN3613-S SNP G -> A AC=1;AN=190;BQB=0.987899;DP=2699;DP4=1410,1187,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.03556e-10;MQSB=0.974262;RPB=0.530992;SGB=50.3161;VDB=0.916723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.3:28295018 chr03:028295018 0 W/28295018-28295018 FN3613-S SNP T -> C AC=1;AN=190;BQB=0.972913;DP=3272;DP4=1428,1712,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.8171e-09;MQSB=0.99624;RPB=0.838681;SGB=67.3108;VDB=0.972756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C165R|318|LOC_Os03g49690|protein_coding|CODING|LOC_Os03g49690.1|1|1) FN2147-S.SNP.3:28307698 chr03:028307698 0 W/28307698-28307698 FN2147-S SNP A -> G AC=1;AN=168;BQB=0.749944;DP=3983;DP4=1904,2049,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.74965e-10;MQSB=0.932074;RPB=0.0620927;SGB=31.908;VDB=0.0805497;EFF=UTR_3_PRIME(MODIFIER||9||262|LOC_Os03g49720|protein_coding|CODING|LOC_Os03g49720.1|6|1) FN2147-S.SNP.3:28307699 chr03:028307699 0 W/28307699-28307699 FN2147-S SNP A -> T AC=1;AN=168;BQB=0.0678439;DP=3985;DP4=1909,2042,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.94217e-09;MQSB=0.933721;RPB=0.403284;SGB=-98.0622;VDB=0.474441;EFF=UTR_3_PRIME(MODIFIER||10||262|LOC_Os03g49720|protein_coding|CODING|LOC_Os03g49720.1|6|1) FN4177-S.SNP.3:28308601 chr03:028308601 0 W/28308601-28308601 FN4177-S SNP A -> T AC=1;AN=170;BQB=0.976533;DP=2497;DP4=1368,1063,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.27951e-09;MQSB=0.954917;RPB=0.817708;SGB=56.7575;VDB=0.504048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L496H|502|LOC_Os03g49730|protein_coding|CODING|LOC_Os03g49730.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L495H|501|LOC_Os03g49730|protein_coding|CODING|LOC_Os03g49730.2|14|1) FN584-S.SNP.3:28311094 chr03:028311094 0 W/28311094-28311094 FN584-S Single Base Substitution C-T INTRON HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2429.SNP.3:28312308 chr03:028312308 0 W/28312308-28312308 FN2429 SNP A -> G AC=2;AN=200;BQB=0.793636;DP=4025;DP4=1817,1761,22,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.09422e-20;MQSB=0.997011;RPB=0.907788;SGB=112.85;VDB=0.339775;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.3:28315755 chr03:028315755 0 W/28315755-28315755 FN1272-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN734-S.SNP.3:28327756 chr03:028327756 0 W/28327756-28327756 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN_N1-26-1.SNP.3:28338400 chr03:028338400 0 W/28338400-28338400 FN_N1-26-1 Single Base Substitution G-A HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN_N1-26-1.SNP.3:28338401 chr03:028338401 0 W/28338401-28338401 FN_N1-26-1 Single Base Substitution G-T HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN_N1-26-1.SNP.3:28338402 chr03:028338402 0 W/28338402-28338402 FN_N1-26-1 Single Base Substitution A-G HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN-84.SNP.3:28339119 chr03:028339119 0 W/28339119-28339119 FN-84 Single Base Substitution T-A UTR_3_PRIME HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1651-S.SNP.3:28339182 chr03:028339182 0 W/28339182-28339182 FN1651-S Single Base Substitution G-T INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3396-S.SNP.3:28345469 chr03:028345469 0 W/28345469-28345469 FN3396-S SNP G -> T AC=1;AN=184;BQB=0.607358;DP=3407;DP4=2192,1126,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58545e-08;MQSB=0.889433;RPB=0.98918;SGB=42.7914;VDB=0.276014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V13L|351|LOC_Os03g49790|protein_coding|CODING|LOC_Os03g49790.1|1|1) FN-232.SNP.3:28351438 chr03:028351438 0 W/28351438-28351438 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3496-S.SNP.3:28352372 chr03:028352372 0 W/28352372-28352372 FN3496-S SNP C -> T AC=2;AN=188;BQB=0.938386;DP=2808;DP4=1375,1356,5,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.17826e-11;MQSB=0.821541;RPB=0.672918;SGB=76.2387;VDB=0.188333;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.3:28355359 chr03:028355359 0 W/28355359-28355359 FN3916-S SNP G -> T AC=2;AN=158;BQB=0.978341;DP=2577;DP4=1217,1154,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.60537e-15;MQSB=0.928261;RPB=0.727037;SGB=77.8763;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.3:28359173 chr03:028359173 0 W/28359173-28359173 FN2246-S SNP T -> A AC=1;AN=190;BQB=0.745615;DP=4777;DP4=2267,2100,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.59577e-10;MQSB=0.990797;RPB=0.994854;SGB=31.3213;VDB=0.365573;EFF=INTRON(MODIFIER||||731|LOC_Os03g49800|protein_coding|CODING|LOC_Os03g49800.1|7|1) FN355-S.SNP.3:28367770 chr03:028367770 0 W/28367770-28367770 FN355-S Single Base Substitution A-G INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2660-S.SNP.3:28369561 chr03:028369561 0 W/28369561-28369561 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.905661;DP=4709;DP4=1953,2533,4,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10062e-12;MQSB=0.863185;RPB=0.987907;SGB=58.2954;VDB=0.798877;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.3:28370256 chr03:028370256 0 W/28370256-28370256 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.113322;DP=4796;DP4=2316,2216,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208507;MQB=8.09929e-19;MQSB=0.846687;RPB=0.822942;SGB=68.5625;VDB=0.98883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:28376025 chr03:028376025 0 W/28376025-28376025 FN2780-S SNP T -> C AC=1;AN=198;BQB=0.46465;DP=4326;DP4=2183,1963,2,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.25349e-10;MQSB=0.864002;RPB=0.962685;SGB=47.3393;VDB=0.641471;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.3:28385624 chr03:028385624 0 W/28385624-28385624 FN3064-S SNP A -> T AC=1;AN=184;BQB=0.439438;DP=3643;DP4=2099,1310,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.28404e-05;MQSB=0.912197;RPB=0.954012;SGB=18.2315;VDB=0.807393;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.3:28387747 chr03:028387747 0 W/28387747-28387747 FN855-S Single Base Substitution C-T INTERGENIC HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN-84.SNP.3:28402763 chr03:028402763 0 W/28402763-28402763 FN-84 Single Base Substitution G-T INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN718-S.SNP.3:28406547 chr03:028406547 0 W/28406547-28406547 FN718-S Single Base Substitution A-G INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1745-S.SNP.3:28413274 chr03:028413274 0 W/28413274-28413274 FN1745-S SNP T -> A AC=2;AN=188;BQB=0.670586;DP=3868;DP4=1866,1949,28,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.31183e-23;MQSB=0.930494;RPB=0.705812;SGB=1.84238;VDB=0.190225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.3:28419030 chr03:028419030 0 W/28419030-28419030 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.421712;DP=3942;DP4=1772,1939,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81163e-10;MQSB=0.967027;RPB=0.706854;SGB=12.5396;VDB=0.684079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.3:28425250 chr03:028425250 0 W/28425250-28425250 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.946424;DP=4778;DP4=2178,2322,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11456e-17;MQSB=0.998769;RPB=0.996198;SGB=87.1368;VDB=0.984377;EFF=INTERGENIC(MODIFIER||||||||||1) FN415-S.SNP.3:28430929 chr03:028430929 0 W/28430929-28430929 FN415-S Single Base Substitution A-G INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3484-S.SNP.3:28432715 chr03:028432715 0 W/28432715-28432715 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.286923;DP=2457;DP4=1158,1188,12,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42845e-06;MQSB=0.982662;RPB=0.105489;SGB=39.2697;VDB=0.885519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.3:28441415 chr03:028441415 0 W/28441415-28441415 FN1156-XA21 Single Base Substitution T-C INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN881-S.SNP.3:28478878 chr03:028478878 0 W/28478878-28478878 FN881-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g49960 expressed protein SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-411.SNP.3:28478898 chr03:028478898 0 W/28478898-28478898 FN-411 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g49960 expressed protein SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN3958-S.SNP.3:28481303 chr03:028481303 0 W/28481303-28481303 FN3958-S SNP A -> T AC=1;AN=168;BQB=0.99194;DP=2493;DP4=1262,1166,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53005e-08;MQSB=0.988571;RPB=0.969577;SGB=61.0344;VDB=0.740498;EFF=INTRON(MODIFIER||||539|LOC_Os03g49960|protein_coding|CODING|LOC_Os03g49960.1|6|1),INTRON(MODIFIER||||538|LOC_Os03g49960|protein_coding|CODING|LOC_Os03g49960.2|6|1),INTRON(MODIFIER||||531|LOC_Os03g49960|protein_coding|CODING|LOC_Os03g49960.5|6|1) FN1465-S.SNP.3:28484654 chr03:028484654 0 W/28484654-28484654 FN1465-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN830-S.SNP.3:28484675 chr03:028484675 0 W/28484675-28484675 FN830-S Single Base Substitution T-A INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2780-S.SNP.3:28489155 chr03:028489155 0 W/28489155-28489155 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.922462;DP=4015;DP4=1937,1839,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43742e-09;MQSB=0.900842;RPB=0.973765;SGB=58.1246;VDB=0.839355;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.3:28490869 chr03:028490869 0 W/28490869-28490869 FN886-S Single Base Substitution G-A INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1236-S.SNP.3:28494289 chr03:028494289 0 W/28494289-28494289 FN1236-S Single Base Substitution T-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1031-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN1031-S Single Base Substitution G-A INTRON HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1492-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN1492-S Single Base Substitution G-A INTRON HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2173-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.1251;DP=3886;DP4=1746,2072,17,17;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.165466;MQB=0.110616;MQSB=1.45503e-07;RPB=0.923569;SGB=-162.179;VDB=0.28207;EFF=INTRON(MODIFIER||||1753|LOC_Os03g49980|protein_coding|CODING|LOC_Os03g49980.1|5|1) FN2439.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN2439 SNP G -> A AC=1;AN=200;BQB=0.997246;DP=3312;DP4=1719,1344,10,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.040157;MQB=0.999943;MQSB=6.21459e-10;RPB=0.862842;SGB=43.8747;VDB=0.194938;EFF=INTRON(MODIFIER||||1753|LOC_Os03g49980|protein_coding|CODING|LOC_Os03g49980.1|5|1) FN3456-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN3456-S SNP G -> A AC=1;AN=184;BQB=0.99971;DP=2580;DP4=1225,1276,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0670543;MQB=0.433006;MQSB=2.97634e-20;RPB=0.559449;SGB=67.4439;VDB=0.0225539;EFF=INTRON(MODIFIER||||1753|LOC_Os03g49980|protein_coding|CODING|LOC_Os03g49980.1|5|1) FN3564-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN3564-S SNP G -> A AC=2;AN=188;BQB=0.863063;DP=2669;DP4=1215,1367,20,9;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.070813;MQB=0.331776;MQSB=7.61419e-25;RPB=0.171393;SGB=126.215;VDB=0.243374;EFF=INTRON(MODIFIER||||1753|LOC_Os03g49980|protein_coding|CODING|LOC_Os03g49980.1|5|1) FN3787-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN3787-S SNP G -> A AC=2;AN=190;BQB=0.8931;DP=2219;DP4=1078,1073,11,8;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0684993;MQB=0.495044;MQSB=9.11835e-13;RPB=0.965363;SGB=80.9724;VDB=0.268958;EFF=INTRON(MODIFIER||||1753|LOC_Os03g49980|protein_coding|CODING|LOC_Os03g49980.1|5|1) FN533-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN533-S Single Base Substitution G-A INTRON HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN626-S.SNP.3:28501288 chr03:028501288 0 W/28501288-28501288 FN626-S Single Base Substitution G-A INTRON HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2701-S.SNP.3:28511290 chr03:028511290 0 W/28511290-28511290 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.942283;DP=4904;DP4=2200,2436,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41621e-07;MQSB=0.967397;RPB=0.999605;SGB=29.4541;VDB=0.216862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.3:28520441 chr03:028520441 0 W/28520441-28520441 FN2430 SNP C -> A AC=1;AN=200;BQB=0.0169585;DP=5139;DP4=2397,2395,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.6804e-06;MQSB=0.999795;RPB=0.802653;SGB=-14.3206;VDB=0.671454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.3:28526674 chr03:028526674 0 W/28526674-28526674 FN3432-S SNP G -> T AC=1;AN=184;BQB=0.870335;DP=3381;DP4=1249,1949,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.56147e-10;MQSB=0.981523;RPB=0.0956656;SGB=60.4004;VDB=0.200442;EFF=INTERGENIC(MODIFIER||||||||||1) FN4025-S.SNP.3:28529417 chr03:028529417 0 W/28529417-28529417 FN4025-S SNP C -> T AC=1;AN=168;BQB=0.585031;DP=2995;DP4=1278,1590,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50549e-06;MQSB=0.970163;RPB=0.808172;SGB=52.1728;VDB=0.710713;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.3:28530674 chr03:028530674 0 W/28530674-28530674 FN919-S Single Base Substitution T-C INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3970-S.SNP.3:28530689 chr03:028530689 0 W/28530689-28530689 FN3970-S SNP A -> G AC=1;AN=168;BQB=0.757553;DP=2854;DP4=1152,1574,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.48872e-11;MQSB=0.959853;RPB=0.896862;SGB=-12.7876;VDB=0.450106;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.3:28547526 chr03:028547526 0 W/28547526-28547526 FN3517-S SNP A -> G AC=2;AN=188;BQB=0.358041;DP=2109;DP4=1243,741,9,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.95116e-05;MQSB=0.695496;RPB=0.716076;SGB=20.9896;VDB=0.122426;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.3:28551332 chr03:028551332 0 W/28551332-28551332 FN504-S Single Base Substitution C-A INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1401-S.SNP.3:28552763 chr03:028552763 0 W/28552763-28552763 FN1401-S Single Base Substitution C-A INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3513-S.SNP.3:28562134 chr03:028562134 0 W/28562134-28562134 FN3513-S SNP A -> C AC=1;AN=188;BQB=0.925704;DP=2697;DP4=1351,1294,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000731361;MQSB=0.856943;RPB=0.996287;SGB=26.2637;VDB=0.664313;EFF=INTRON(MODIFIER||||291|LOC_Os03g50070|protein_coding|CODING|LOC_Os03g50070.1|3|1) FN1310-S.SNP.3:28572816 chr03:028572816 0 W/28572816-28572816 FN1310-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1310-S.SNP.3:28572817 chr03:028572817 0 W/28572817-28572817 FN1310-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN-157.SNP.3:28576706 chr03:028576706 0 W/28576706-28576706 FN-157 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g50100 expressed protein SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN709-S.SNP.3:28580980 chr03:028580980 0 W/28580980-28580980 FN709-S Single Base Substitution A-T INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN4090-S.SNP.3:28582717 chr03:028582717 0 W/28582717-28582717 FN4090-S SNP G -> T AC=1;AN=182;BQB=0.999423;DP=3079;DP4=1609,1380,7,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.49679e-12;MQSB=0.988031;RPB=0.0426991;SGB=67.2255;VDB=0.0113471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.3:28584425 chr03:028584425 0 W/28584425-28584425 FN2113-S SNP G -> A AC=1;AN=168;BQB=0.191356;DP=4023;DP4=1925,2036,17,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.8472e-14;MQSB=0.972892;RPB=0.974185;SGB=-261.305;VDB=0.746378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.3:28589417 chr03:028589417 0 W/28589417-28589417 FN3564-S SNP G -> T AC=2;AN=188;BQB=0.989755;DP=3005;DP4=1242,1643,15,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.8302e-19;MQSB=0.952663;RPB=0.0427932;SGB=113.937;VDB=0.240839;EFF=INTRON(MODIFIER||||504|LOC_Os03g50120|protein_coding|CODING|LOC_Os03g50120.1|1|1) FN1082-S.SNP.3:28600643 chr03:028600643 0 W/28600643-28600643 FN1082-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g50150 NB-ARC domain containing protein, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN560-S.SNP.3:28603331 chr03:028603331 0 W/28603331-28603331 FN560-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1025-S.SNP.3:28604399 chr03:028604399 0 W/28604399-28604399 FN1025-S Single Base Substitution A-G INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN4046-S.SNP.3:28606885 chr03:028606885 0 W/28606885-28606885 FN4046-S SNP A -> T AC=1;AN=168;BQB=0.971612;DP=2523;DP4=1211,1218,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62436e-08;MQSB=0.999748;RPB=0.583089;SGB=17.3231;VDB=0.148411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.3:28607123 chr03:028607123 0 W/28607123-28607123 FN2280-S SNP C -> T AC=2;AN=190;BQB=0.15801;DP=5016;DP4=2227,2319,22,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.264e-23;MQSB=0.521321;RPB=0.98534;SGB=-102.257;VDB=0.210954;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.3:28613189 chr03:028613189 0 W/28613189-28613189 FN-123 Single Base Substitution G-A INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN713-S.SNP.3:28634153 chr03:028634153 0 W/28634153-28634153 FN713-S Single Base Substitution C-T INTRON HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3283-S.SNP.3:28635740 chr03:028635740 0 W/28635740-28635740 FN3283-S SNP A -> C AC=1;AN=184;BQB=0.975167;DP=2954;DP4=1497,1272,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000338524;MQB=0.000169619;MQSB=0.498333;RPB=0.741467;SGB=39.699;VDB=0.123955;EFF=INTRON(MODIFIER||||227|LOC_Os03g50220|protein_coding|CODING|LOC_Os03g50220.1|2|1) FN-140.SNP.3:28641579 chr03:028641579 0 W/28641579-28641579 FN-140 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g50230 protein kinase, putative, expressed SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN_822-5-1.SNP.3:28642236 chr03:028642236 0 W/28642236-28642236 FN_822-5-1 Single Base Substitution G-A HET LOC_Os03g50230 protein kinase, putative, expressed SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3662-S.SNP.3:28644077 chr03:028644077 0 W/28644077-28644077 FN3662-S SNP A -> T AC=2;AN=190;BQB=0.912274;DP=2848;DP4=1456,1227,18,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.14963e-15;MQSB=0.92223;RPB=0.233969;SGB=108.296;VDB=0.385392;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.3:28661597 chr03:028661597 0 W/28661597-28661597 FN448-S Single Base Substitution A-G INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1089-S.SNP.3:28662391 chr03:028662391 0 W/28662391-28662391 FN1089-S Single Base Substitution T-C INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2296.SNP.3:28668746 chr03:028668746 0 W/28668746-28668746 FN2296 SNP G -> A AC=1;AN=192;BQB=0.314255;DP=5135;DP4=2284,2484,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.63457e-14;MQSB=0.927442;RPB=0.894184;SGB=-103.238;VDB=0.795094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.3:28668747 chr03:028668747 0 W/28668747-28668747 FN2296 SNP A -> T AC=1;AN=192;BQB=0.801849;DP=5153;DP4=2304,2537,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.28203e-14;MQSB=0.92111;RPB=0.969144;SGB=41.7357;VDB=0.531525;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.3:28668777 chr03:028668777 0 W/28668777-28668777 FN544-S Single Base Substitution A-G INTERGENIC HOMO SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN1057-S.SNP.3:28679241 chr03:028679241 0 W/28679241-28679241 FN1057-S Single Base Substitution T-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3819-S.SNP.3:28685339 chr03:028685339 0 W/28685339-28685339 FN3819-S SNP T -> C AC=1;AN=190;BQB=0.921692;DP=2842;DP4=1396,1368,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65642e-11;MQSB=0.960024;RPB=0.728979;SGB=60.9777;VDB=0.756101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.3:28689874 chr03:028689874 0 W/28689874-28689874 FN1585-S Single Base Substitution T-C INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3740-S.SNP.3:28704486 chr03:028704486 0 W/28704486-28704486 FN3740-S SNP C -> A AC=1;AN=190;BQB=0.967226;DP=2700;DP4=1055,1532,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.88679e-05;MQSB=0.844799;RPB=0.948632;SGB=35.4339;VDB=0.624481;EFF=INTRON(MODIFIER||||832|LOC_Os03g50325|protein_coding|CODING|LOC_Os03g50325.1|1|1) FN1067-S.SNP.3:28705585 chr03:028705585 0 W/28705585-28705585 FN1067-S Single Base Substitution G-A INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1740-S.SNP.3:28706209 chr03:028706209 0 W/28706209-28706209 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.912749;DP=2679;DP4=1443,1189,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000373274;MQB=1.82532e-07;MQSB=0.626534;RPB=0.581621;SGB=-12.2833;VDB=0.918279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.3:28714408 chr03:028714408 0 W/28714408-28714408 FN-113 Single Base Substitution A-T INTRON HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-225.SNP.3:28725446 chr03:028725446 0 W/28725446-28725446 FN-225 Single Base Substitution C-A INTERGENIC HOMO SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1750-S.SNP.3:28732337 chr03:028732337 0 W/28732337-28732337 FN1750-S SNP C -> A AC=2;AN=188;BQB=0.891603;DP=2673;DP4=1604,1005,21,12;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000748223;MQB=1.69006e-10;MQSB=0.0782103;RPB=0.294031;SGB=106.85;VDB=0.826466;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D843Y|1218|LOC_Os03g50350|protein_coding|CODING|LOC_Os03g50350.1|3|1) FN747-S.SNP.3:28737210 chr03:028737210 0 W/28737210-28737210 FN747-S Single Base Substitution G-A INTERGENIC HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN4180-S.SNP.3:28739575 chr03:028739575 0 W/28739575-28739575 FN4180-S SNP C -> A AC=1;AN=170;BQB=0.968793;DP=2656;DP4=1397,1169,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000224002;MQSB=0.999986;RPB=0.161549;SGB=17.6652;VDB=0.552214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.3:28749529 chr03:028749529 0 W/28749529-28749529 FN2424 SNP G -> A AC=1;AN=200;BQB=0.878595;DP=4844;DP4=2645,1810,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.61447e-15;MQSB=0.629278;RPB=0.979583;SGB=52.9314;VDB=0.451486;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.3:28765579 chr03:028765579 0 W/28765579-28765579 FN-144 Single Base Substitution A-T INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2663-S.SNP.3:28777327 chr03:028777327 0 W/28777327-28777327 FN2663-S SNP G -> T AC=2;AN=200;BQB=0.999936;DP=4913;DP4=2394,2260,12,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.60278e-17;MQSB=0.942498;RPB=0.96156;SGB=87.1368;VDB=0.907909;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.3:28784278 chr03:028784278 0 W/28784278-28784278 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.994059;DP=2184;DP4=1005,1132,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.6531e-06;MQSB=0.95351;RPB=0.974635;SGB=21.6609;VDB=0.997974;EFF=INTRON(MODIFIER||||161|LOC_Os03g50440|protein_coding|CODING|LOC_Os03g50440.1|1|1) FN1520-S.SNP.3:28794338 chr03:028794338 0 W/28794338-28794338 FN1520-S Single Base Substitution T-G INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN_807-3-1.SNP.3:28801960 chr03:028801960 0 W/28801960-28801960 FN_807-3-1 Single Base Substitution G-A HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN3896-S.SNP.3:28801985 chr03:028801985 0 W/28801985-28801985 FN3896-S SNP C -> T AC=2;AN=158;BQB=0.988948;DP=2892;DP4=1234,1482,10,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.52225e-15;MQSB=0.827521;RPB=0.99987;SGB=112.609;VDB=0.84252;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.3:28804605 chr03:028804605 0 W/28804605-28804605 FN354-S Single Base Substitution G-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3359-S.SNP.3:28806025 chr03:028806025 0 W/28806025-28806025 FN3359-S SNP T -> C AC=2;AN=184;BQB=0.5187;DP=2775;DP4=1293,1351,6,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.87051e-07;MQSB=0.963566;RPB=0.795928;SGB=39.2697;VDB=0.795841;EFF=INTRON(MODIFIER||||184|LOC_Os03g50470|protein_coding|CODING|LOC_Os03g50470.1|2|1),INTRON(MODIFIER||||184|LOC_Os03g50470|protein_coding|CODING|LOC_Os03g50470.2|4|1) FN2723-S.SNP.3:28809447 chr03:028809447 0 W/28809447-28809447 FN2723-S SNP T -> G AC=1;AN=200;BQB=0.929391;DP=4724;DP4=2354,2086,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93127e-06;MQSB=0.95629;RPB=0.43987;SGB=13.8539;VDB=0.706816;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R13|184|LOC_Os03g50470|protein_coding|CODING|LOC_Os03g50470.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R13|184|LOC_Os03g50470|protein_coding|CODING|LOC_Os03g50470.2|3|1) FN3740-S.SNP.3:28810927 chr03:028810927 0 W/28810927-28810927 FN3740-S SNP A -> G AC=1;AN=190;BQB=0.688475;DP=2931;DP4=1615,1146,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00203039;MQSB=0.993478;RPB=0.85846;SGB=18.3316;VDB=0.452509;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.3:28811434 chr03:028811434 0 W/28811434-28811434 FN1243-S Single Base Substitution A-T INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3326-S.SNP.3:28811434 chr03:028811434 0 W/28811434-28811434 FN3326-S SNP A -> T AC=1;AN=184;BQB=0.929212;DP=3095;DP4=1752,1216,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.12484e-14;MQSB=0.996742;RPB=0.193185;SGB=-41.0125;VDB=0.0193645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.3:28816471 chr03:028816471 0 W/28816471-28816471 FN2681-S SNP T -> C AC=1;AN=200;BQB=0.986943;DP=4836;DP4=2315,2317,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27361e-12;MQSB=0.892091;RPB=0.798435;SGB=109.527;VDB=0.962363;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V178A|582|LOC_Os03g50480|protein_coding|CODING|LOC_Os03g50480.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V101A|505|LOC_Os03g50480|protein_coding|CODING|LOC_Os03g50480.2|7|1) FN2166-S.SNP.3:28816969 chr03:028816969 0 W/28816969-28816969 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.0676442;DP=3917;DP4=1799,2091,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.25587e-07;MQSB=0.967707;RPB=0.851698;SGB=-64.9298;VDB=0.807913;EFF=INTRON(MODIFIER||||582|LOC_Os03g50480|protein_coding|CODING|LOC_Os03g50480.1|9|1),INTRON(MODIFIER||||505|LOC_Os03g50480|protein_coding|CODING|LOC_Os03g50480.2|9|1) FN2742-S.SNP.3:28825708 chr03:028825708 0 W/28825708-28825708 FN2742-S SNP G -> T AC=1;AN=200;BQB=0.274908;DP=4633;DP4=2212,2096,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.57607e-16;MQSB=0.843171;RPB=0.605358;SGB=87.1368;VDB=0.176884;EFF=INTRON(MODIFIER||||370|LOC_Os03g50490|protein_coding|CODING|LOC_Os03g50490.1|1|1) FN2673-S.SNP.3:28831727 chr03:028831727 0 W/28831727-28831727 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.851033;DP=4616;DP4=2214,2224,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87813e-17;MQSB=0.964248;RPB=0.998754;SGB=118.737;VDB=0.561843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R301L|771|LOC_Os03g50500|protein_coding|CODING|LOC_Os03g50500.1|1|1) FN-279.SNP.3:28843336 chr03:028843336 0 W/28843336-28843336 FN-279 Single Base Substitution C-G INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3389-S.SNP.3:28845139 chr03:028845139 0 W/28845139-28845139 FN3389-S SNP G -> C AC=1;AN=184;BQB=0.980765;DP=2600;DP4=1247,1279,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.14773e-06;MQSB=0.887763;RPB=0.619923;SGB=35.1773;VDB=0.565813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.3:28851151 chr03:028851151 0 W/28851151-28851151 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.818082;DP=4631;DP4=2209,2084,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.94934e-16;MQSB=0.912529;RPB=1;SGB=96.5165;VDB=0.85686;EFF=INTRON(MODIFIER||||611|LOC_Os03g50520|protein_coding|CODING|LOC_Os03g50520.1|13|1),INTRON(MODIFIER||||571|LOC_Os03g50520|protein_coding|CODING|LOC_Os03g50520.2|12|1) FN3793-S.SNP.3:28854919 chr03:028854919 0 W/28854919-28854919 FN3793-S SNP T -> C AC=2;AN=190;BQB=0.903909;DP=2853;DP4=1122,1626,6,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.09451e-11;MQSB=0.958478;RPB=0.847681;SGB=41.5369;VDB=0.824652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.3:28856301 chr03:028856301 0 W/28856301-28856301 FN1351-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g50540 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1504-S.SNP.3:28858259 chr03:028858259 0 W/28858259-28858259 FN1504-S Single Base Substitution C-A INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN-402.SNP.3:28865047 chr03:028865047 0 W/28865047-28865047 FN-402 Single Base Substitution G-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2462.SNP.3:28866596 chr03:028866596 0 W/28866596-28866596 FN2462 SNP A -> T AC=2;AN=200;BQB=0.627648;DP=4033;DP4=1735,2116,21,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000495909;MQB=5.053e-22;MQSB=0.00207231;RPB=0.170349;SGB=192.42;VDB=0.219913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.3:28868856 chr03:028868856 0 W/28868856-28868856 FN2103-S SNP T -> C AC=1;AN=168;BQB=0.221614;DP=3870;DP4=2007,1816,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.58729e-13;MQSB=0.983223;RPB=0.986745;SGB=-45.1967;VDB=0.795998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.3:28880949 chr03:028880949 0 W/28880949-28880949 FN2591-S SNP T -> C AC=1;AN=198;BQB=0.256906;DP=4060;DP4=1816,2077,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.27742e-06;MQSB=0.989869;RPB=0.911646;SGB=35.7638;VDB=0.765169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.3:28881227 chr03:028881227 0 W/28881227-28881227 FN2753-S SNP C -> A AC=1;AN=200;BQB=0.809588;DP=4728;DP4=2380,2090,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.75181e-10;MQSB=0.945765;RPB=0.607681;SGB=11.0951;VDB=0.696646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.3:28883911 chr03:028883911 0 W/28883911-28883911 FN1015-S Single Base Substitution G-A INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1509-S.SNP.3:28890155 chr03:028890155 0 W/28890155-28890155 FN1509-S Single Base Substitution G-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1610-S.SNP.3:28900364 chr03:028900364 0 W/28900364-28900364 FN1610-S Single Base Substitution G-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1610-S.SNP.3:28900365 chr03:028900365 0 W/28900365-28900365 FN1610-S Single Base Substitution G-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN_807-3-1.SNP.3:28904256 chr03:028904256 0 W/28904256-28904256 FN_807-3-1 Single Base Substitution G-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1116-S.SNP.3:28919620 chr03:028919620 0 W/28919620-28919620 FN1116-S Single Base Substitution C-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1080-S.SNP.3:28923535 chr03:028923535 0 W/28923535-28923535 FN1080-S Single Base Substitution T-G INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3537-S.SNP.3:28924632 chr03:028924632 0 W/28924632-28924632 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.33077;DP=2573;DP4=1300,1194,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7128e-08;MQSB=0.918343;RPB=0.861995;SGB=23.5329;VDB=0.0537192;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.3:28932363 chr03:028932363 0 W/28932363-28932363 FN-198 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g50670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-198.SNP.3:28932364 chr03:028932364 0 W/28932364-28932364 FN-198 Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN1535-S.SNP.3:28937040 chr03:028937040 0 W/28937040-28937040 FN1535-S Single Base Substitution T-C INTRON HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN3997-S.SNP.3:28940383 chr03:028940383 0 W/28940383-28940383 FN3997-S SNP A -> G AC=2;AN=168;BQB=0.981877;DP=1607;DP4=662,792,10,18;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000622278;MQB=7.86988e-12;MQSB=0.829897;RPB=0.310097;SGB=77.621;VDB=0.392327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.3:28951218 chr03:028951218 0 W/28951218-28951218 FN1093-S Single Base Substitution G-A INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN627-S.SNP.3:28951218 chr03:028951218 0 W/28951218-28951218 FN627-S Single Base Substitution G-A INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN1023-S.SNP.3:28955769 chr03:028955769 0 W/28955769-28955769 FN1023-S Single Base Substitution G-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2706-S.SNP.3:28958601 chr03:028958601 0 W/28958601-28958601 FN2706-S SNP T -> C AC=1;AN=200;BQB=0.74645;DP=4767;DP4=2183,2371,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66089e-11;MQSB=0.968548;RPB=0.805438;SGB=42.5108;VDB=0.598245;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.3:28970912 chr03:028970912 0 W/28970912-28970912 FN389-S Single Base Substitution C-G INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3556-S.SNP.3:28972129 chr03:028972129 0 W/28972129-28972129 FN3556-S SNP T -> C AC=1;AN=188;BQB=0.920866;DP=2818;DP4=1503,1196,16,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42195e-13;MQSB=0.900204;RPB=0.527647;SGB=98.9552;VDB=0.904745;EFF=INTRON(MODIFIER||||984|LOC_Os03g50740|protein_coding|CODING|LOC_Os03g50740.1|4|1),INTRON(MODIFIER||||984|LOC_Os03g50740|protein_coding|CODING|LOC_Os03g50740.2|4|1),INTRON(MODIFIER||||923|LOC_Os03g50740|protein_coding|CODING|LOC_Os03g50740.3|4|1) FN1156-XA21.SNP.3:28976998 chr03:028976998 0 W/28976998-28976998 FN1156-XA21 Single Base Substitution C-T INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3994-S.SNP.3:28977007 chr03:028977007 0 W/28977007-28977007 FN3994-S SNP A -> T AC=1;AN=168;BQB=0.754054;DP=2835;DP4=1388,1289,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=9.09315e-05;MQSB=0.0217945;RPB=0.592144;SGB=-16.2342;VDB=0.0668852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.3:28983964 chr03:028983964 0 W/28983964-28983964 FN1214-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1108-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN1108-S Single Base Substitution A-G INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1243-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN1243-S Single Base Substitution A-G INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2268-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN2268-S SNP A -> G AC=1;AN=190;BQB=0.915796;DP=4854;DP4=1862,2598,14,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43167e-19;MQSB=0.972368;RPB=0.203203;SGB=158.388;VDB=0.66201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN2304 SNP A -> G AC=2;AN=192;BQB=0.156723;DP=4732;DP4=1834,2526,20,40;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.14341e-34;MQSB=0.996598;RPB=0.988556;SGB=203.74;VDB=0.623319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.774873;DP=4117;DP4=1601,2304,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81075e-10;MQSB=0.999663;RPB=0.973266;SGB=67.9293;VDB=0.186092;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN3531-S SNP A -> G AC=2;AN=188;BQB=0.801939;DP=2765;DP4=961,1688,5,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.44768e-11;MQSB=0.953188;RPB=0.0382361;SGB=-13.3699;VDB=0.0174419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN3593-S SNP A -> G AC=2;AN=190;BQB=0.897115;DP=2601;DP4=972,1473,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.46798e-17;MQSB=0.996849;RPB=0.729233;SGB=92.9626;VDB=0.0511913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN4090-S SNP A -> G AC=2;AN=182;BQB=0.96588;DP=2814;DP4=1058,1619,10,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.8885e-18;MQSB=0.942432;RPB=0.587173;SGB=134.329;VDB=0.693034;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN4312-S SNP A -> G AC=1;AN=170;BQB=0.976679;DP=2301;DP4=922,1286,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.04846e-06;MQSB=0.94027;RPB=0.999946;SGB=43.4296;VDB=0.605455;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN505-S Single Base Substitution A-G INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN681-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN681-S Single Base Substitution A-G INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN764-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN764-S Single Base Substitution A-G INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN828-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN828-S Single Base Substitution A-G INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN901-S.SNP.3:28984926 chr03:028984926 0 W/28984926-28984926 FN901-S Single Base Substitution A-G INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2686-S.SNP.3:28985919 chr03:028985919 0 W/28985919-28985919 FN2686-S SNP A -> G AC=1;AN=200;BQB=0.894452;DP=5085;DP4=2657,2231,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87967e-08;MQSB=0.969554;RPB=0.681807;SGB=47.4799;VDB=0.444161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.3:28986788 chr03:028986788 0 W/28986788-28986788 FN2449 SNP C -> T AC=2;AN=200;BQB=0.999335;DP=4822;DP4=2232,2311,13,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000207383;MQB=3.32595e-18;MQSB=0.919441;RPB=0.841866;SGB=132.552;VDB=0.0160135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.3:28986789 chr03:028986789 0 W/28986789-28986789 FN2449 SNP A -> T AC=2;AN=200;BQB=0.880076;DP=4832;DP4=2254,2233,15,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000206954;MQB=3.15889e-18;MQSB=0.949713;RPB=0.891579;SGB=35.1726;VDB=0.0115548;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.3:28999730 chr03:028999730 0 W/28999730-28999730 FN2172-S SNP T -> A AC=2;AN=168;BQB=0.0217438;DP=2051;DP4=823,1192,2,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.02907e-07;MQSB=0.928087;RPB=0.989471;SGB=5.62151;VDB=0.998062;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.3:29000352 chr03:029000352 0 W/29000352-29000352 FN973-S Single Base Substitution A-G INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. W360-2S-2.SNP.3:29000709 chr03:029000709 0 W/29000709-29000709 W360-2S-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2447.SNP.3:29005749 chr03:029005749 0 W/29005749-29005749 FN2447 SNP T -> C AC=1;AN=200;BQB=7.09447e-06;DP=4547;DP4=1657,2232,31,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219925;MQB=8.18714e-08;MQSB=0.999668;RPB=0.489428;SGB=-802.599;VDB=0.0257027;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.3:29008942 chr03:029008942 0 W/29008942-29008942 FN527-S Single Base Substitution G-C INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3980-S.SNP.3:29013235 chr03:029013235 0 W/29013235-29013235 FN3980-S SNP A -> G AC=2;AN=168;BQB=0.944003;DP=2998;DP4=1282,1539,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.6653e-13;MQSB=0.531994;RPB=0.713375;SGB=69.0561;VDB=0.907964;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.3:29014304 chr03:029014304 0 W/29014304-29014304 FN590-S Single Base Substitution A-C INTERGENIC HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN4044-S.SNP.3:29015009 chr03:029015009 0 W/29015009-29015009 FN4044-S SNP C -> T AC=1;AN=168;BQB=0.94931;DP=2662;DP4=1325,1233,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06139e-09;MQSB=0.837117;RPB=0.452535;SGB=48.4712;VDB=0.0663242;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.3:29024780 chr03:029024780 0 W/29024780-29024780 FN477-S Single Base Substitution T-C INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1559-S.SNP.3:29025283 chr03:029025283 0 W/29025283-29025283 FN1559-S Single Base Substitution C-T INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2092-S.SNP.3:29025815 chr03:029025815 0 W/29025815-29025815 FN2092-S SNP C -> T AC=1;AN=168;BQB=0.973364;DP=3790;DP4=1943,1803,20,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.9914e-17;MQSB=0.89591;RPB=0.836722;SGB=65.9394;VDB=0.919817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:29025841 chr03:029025841 0 W/29025841-29025841 FN2659-S SNP C -> T AC=2;AN=200;BQB=0.806294;DP=4672;DP4=2267,2095,23,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.44277e-22;MQSB=0.96685;RPB=0.401964;SGB=134.004;VDB=0.767935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1449-S.SNP.3:29026996 chr03:029026996 0 W/29026996-29026996 FN1449-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2350.SNP.3:29037285 chr03:029037285 0 W/29037285-29037285 FN2350 SNP C -> T AC=1;AN=192;BQB=0.818651;DP=4691;DP4=2330,2037,19,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.60999e-15;MQSB=0.91068;RPB=0.573256;SGB=29.2557;VDB=0.00101174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.3:29051881 chr03:029051881 0 W/29051881-29051881 FN1250-S Single Base Substitution G-C INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2166-S.SNP.3:29051881 chr03:029051881 0 W/29051881-29051881 FN2166-S SNP G -> C AC=1;AN=168;BQB=0.999995;DP=2675;DP4=1185,1415,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9268e-10;MQSB=0.02607;RPB=0.987362;SGB=58.7637;VDB=0.51241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.3:29051881 chr03:029051881 0 W/29051881-29051881 FN3394-S SNP G -> C AC=2;AN=184;BQB=0.941836;DP=3648;DP4=2258,1197,21,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.76648e-14;MQSB=0.275302;RPB=0.327368;SGB=109.705;VDB=0.174809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.3:29064796 chr03:029064796 0 W/29064796-29064796 FN3438-S SNP T -> A AC=1;AN=184;BQB=0.838358;DP=3112;DP4=1434,1456,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.51764e-08;MQSB=0.665321;RPB=0.465995;SGB=-15.7576;VDB=0.447743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2110-S.SNP.3:29094410 chr03:029094410 0 W/29094410-29094410 FN2110-S SNP C -> T AC=1;AN=168;BQB=0.921344;DP=3978;DP4=1816,2112,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.25823e-13;MQSB=0.999186;RPB=0.924431;SGB=46.4929;VDB=0.535376;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.3:29098394 chr03:029098394 0 W/29098394-29098394 FN4011-S SNP G -> A AC=2;AN=168;BQB=0.894976;DP=2974;DP4=1539,1245,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.41673e-15;MQSB=0.867094;RPB=0.790059;SGB=131.927;VDB=0.228804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.3:29104159 chr03:029104159 0 W/29104159-29104159 FN-234 Single Base Substitution G-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN1423-S.SNP.3:29118687 chr03:029118687 0 W/29118687-29118687 FN1423-S Single Base Substitution G-A INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3667-S.SNP.3:29119072 chr03:029119072 0 W/29119072-29119072 FN3667-S SNP A -> G AC=1;AN=190;BQB=0.529213;DP=2648;DP4=759,1725,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.90785e-06;MQSB=0.175294;RPB=0.978074;SGB=13.4442;VDB=0.274778;EFF=SPLICE_SITE_REGION(LOW||||702|LOC_Os03g50970|protein_coding|CODING|LOC_Os03g50970.1|2|1),INTRON(MODIFIER||||702|LOC_Os03g50970|protein_coding|CODING|LOC_Os03g50970.1|2|1) FN1508-S.SNP.3:29129302 chr03:029129302 0 W/29129302-29129302 FN1508-S Single Base Substitution G-A INTRON Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3901-S.SNP.3:29134245 chr03:029134245 0 W/29134245-29134245 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.609581;DP=2514;DP4=1282,1085,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.35462e-06;MQSB=0.948501;RPB=0.808101;SGB=16.7104;VDB=0.856873;EFF=INTRON(MODIFIER||||813|LOC_Os03g50980|protein_coding|CODING|LOC_Os03g50980.1|15|1) FN-181.SNP.3:29137379 chr03:029137379 0 W/29137379-29137379 FN-181 Single Base Substitution C-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3514-S.SNP.3:29141056 chr03:029141056 0 W/29141056-29141056 FN3514-S SNP A -> T AC=2;AN=188;BQB=0.806999;DP=2574;DP4=1251,1234,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.67192e-18;MQSB=0.954636;RPB=0.848269;SGB=33.3175;VDB=0.31592;EFF=INTRON(MODIFIER||||625|LOC_Os03g51000|protein_coding|CODING|LOC_Os03g51000.1|8|1),INTRON(MODIFIER||||594|LOC_Os03g51000|protein_coding|CODING|LOC_Os03g51000.2|9|1),INTRON(MODIFIER||||495|LOC_Os03g51000|protein_coding|CODING|LOC_Os03g51000.3|7|1) FN2347.SNP.3:29145689 chr03:029145689 0 W/29145689-29145689 FN2347 SNP G -> C AC=2;AN=192;BQB=0.522207;DP=4597;DP4=2227,2049,35,21;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000217533;MQB=2.58735e-27;MQSB=2.34798e-07;RPB=0.99008;SGB=189.483;VDB=0.304502;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.3:29161527 chr03:029161527 0 W/29161527-29161527 FN446-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g51020 expressed protein SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN3765-S.SNP.3:29166335 chr03:029166335 0 W/29166335-29166335 FN3765-S SNP A -> G AC=1;AN=190;BQB=0.985485;DP=3167;DP4=1567,1480,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27203e-08;MQSB=0.964531;RPB=0.698229;SGB=50.3161;VDB=0.0892738;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.3:29166787 chr03:029166787 0 W/29166787-29166787 FN933-S Single Base Substitution G-A INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1660-S.SNP.3:29171496 chr03:029171496 0 W/29171496-29171496 FN1660-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g51030 phytochrome A, putative, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN670-S.SNP.3:29180158 chr03:029180158 0 W/29180158-29180158 FN670-S Single Base Substitution A-T INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1475-S.SNP.3:29183105 chr03:029183105 0 W/29183105-29183105 FN1475-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g51040 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2628-S.SNP.3:29195044 chr03:029195044 0 W/29195044-29195044 FN2628-S SNP C -> G AC=1;AN=200;BQB=0.511327;DP=4514;DP4=2237,2010,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55602e-16;MQSB=0.99365;RPB=0.348085;SGB=90.7419;VDB=0.233094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.3:29218680 chr03:029218680 0 W/29218680-29218680 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN747-S.SNP.3:29219443 chr03:029219443 0 W/29219443-29219443 FN747-S Single Base Substitution G-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2557-S.SNP.3:29219760 chr03:029219760 0 W/29219760-29219760 FN2557-S SNP T -> A AC=1;AN=198;BQB=0.118426;DP=3878;DP4=1997,1577,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000257865;MQB=4.79736e-06;MQSB=0.983727;RPB=0.908427;SGB=6.15916;VDB=0.60711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.3:29220457 chr03:029220457 0 W/29220457-29220457 FN1707-S SNP A -> G AC=1;AN=188;BQB=0.43671;DP=3493;DP4=1791,1646,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.3274e-08;MQSB=0.970851;RPB=0.732786;SGB=8.62479;VDB=0.0297528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.3:29227093 chr03:029227093 0 W/29227093-29227093 FN3713-S SNP G -> A AC=1;AN=190;BQB=0.982643;DP=2825;DP4=1308,1438,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11068e-13;MQSB=0.843278;RPB=0.966229;SGB=64.5316;VDB=0.56865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.3:29228146 chr03:029228146 0 W/29228146-29228146 FN1271-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1724-S.SNP.3:29228147 chr03:029228147 0 W/29228147-29228147 FN1724-S SNP A -> T AC=1;AN=188;BQB=0.0502753;DP=4025;DP4=1938,2021,15,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.38517e-06;MQSB=0.982488;RPB=0.819881;SGB=-214.621;VDB=0.122967;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.3:29228643 chr03:029228643 0 W/29228643-29228643 FN-165 Single Base Substitution A-G INTERGENIC HOMO SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3292-S.SNP.3:29233812 chr03:029233812 0 W/29233812-29233812 FN3292-S SNP A -> G AC=1;AN=184;BQB=0.9931;DP=2700;DP4=1379,1239,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.52763e-08;MQSB=0.970732;RPB=0.942875;SGB=42.7914;VDB=0.456257;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.3:29242170 chr03:029242170 0 W/29242170-29242170 FN-194 Single Base Substitution T-C INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3460-S.SNP.3:29243553 chr03:029243553 0 W/29243553-29243553 FN3460-S SNP C -> T AC=1;AN=184;BQB=0.996635;DP=3684;DP4=1734,1831,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11726e-08;MQSB=0.987077;RPB=0.999878;SGB=62.3078;VDB=0.451525;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.3:29252133 chr03:029252133 0 W/29252133-29252133 FN-179 Single Base Substitution T-G INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2595-S.SNP.3:29257862 chr03:029257862 0 W/29257862-29257862 FN2595-S SNP A -> T AC=1;AN=198;BQB=0.999206;DP=4335;DP4=1898,2066,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.6092e-09;MQSB=0.987312;RPB=0.337974;SGB=40.149;VDB=0.550319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.3:29259595 chr03:029259595 0 W/29259595-29259595 FN2489 SNP T -> G AC=1;AN=200;BQB=0.172452;DP=5081;DP4=2309,2474,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88318e-06;MQSB=0.999293;RPB=0.496411;SGB=1.46408;VDB=0.0783285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.3:29259999 chr03:029259999 0 W/29259999-29259999 FN3743-S SNP T -> A AC=1;AN=190;BQB=0.885917;DP=3037;DP4=1522,1398,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.15518e-09;MQSB=0.780732;RPB=0.229625;SGB=53.6492;VDB=0.0165404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.3:29260004 chr03:029260004 0 W/29260004-29260004 FN3743-S SNP G -> A AC=1;AN=190;BQB=0.993154;DP=3050;DP4=1504,1406,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.553e-10;MQSB=0.929872;RPB=0.202208;SGB=46.7622;VDB=0.0077823;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.3:29267023 chr03:029267023 0 W/29267023-29267023 FN4044-S SNP A -> G AC=1;AN=168;BQB=0.946767;DP=2554;DP4=1162,1284,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.60157e-09;MQSB=0.594152;RPB=0.991781;SGB=41.6096;VDB=0.61005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E827G|1206|LOC_Os03g51140|protein_coding|CODING|LOC_Os03g51140.1|25|1) FN4020-S.SNP.3:29267501 chr03:029267501 0 W/29267501-29267501 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.910739;DP=2397;DP4=1131,1100,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0450563;MQB=1.08013e-05;MQSB=0.998867;RPB=0.778166;SGB=92.0501;VDB=0.854347;EFF=INTRON(MODIFIER||||1206|LOC_Os03g51140|protein_coding|CODING|LOC_Os03g51140.1|25|1) FN2673-S.SNP.3:29269178 chr03:029269178 0 W/29269178-29269178 FN2673-S SNP T -> A AC=1;AN=200;BQB=0.729515;DP=4973;DP4=2414,2307,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.80808e-15;MQSB=0.939724;RPB=0.877181;SGB=72.7161;VDB=0.729402;EFF=INTRON(MODIFIER||||1206|LOC_Os03g51140|protein_coding|CODING|LOC_Os03g51140.1|26|1) FN2673-S.SNP.3:29269204 chr03:029269204 0 W/29269204-29269204 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.924258;DP=5102;DP4=2579,2163,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12734e-14;MQSB=0.848678;RPB=0.962541;SGB=-8.87404;VDB=0.483865;EFF=INTRON(MODIFIER||||1206|LOC_Os03g51140|protein_coding|CODING|LOC_Os03g51140.1|26|1) FN1221-S.SNP.3:29273200 chr03:029273200 0 W/29273200-29273200 FN1221-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN704-S.SNP.3:29285306 chr03:029285306 0 W/29285306-29285306 FN704-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g51180 expressed protein SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3859-S.SNP.3:29286115 chr03:029286115 0 W/29286115-29286115 FN3859-S SNP G -> C AC=1;AN=158;BQB=0.961363;DP=2880;DP4=1474,1268,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.64707e-09;MQSB=0.565273;RPB=0.665173;SGB=50.9207;VDB=0.264954;EFF=UTR_5_PRIME(MODIFIER||173||336|LOC_Os03g51180|protein_coding|CODING|LOC_Os03g51180.1|1|1) FN-183.SNP.3:29287701 chr03:029287701 0 W/29287701-29287701 FN-183 Single Base Substitution A-T INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3429-S.SNP.3:29289911 chr03:029289911 0 W/29289911-29289911 FN3429-S SNP T -> A AC=1;AN=184;BQB=0.971115;DP=3276;DP4=1378,1611,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.18999e-07;MQSB=0.91791;RPB=0.774549;SGB=18.2315;VDB=0.489152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.3:29296956 chr03:029296956 0 W/29296956-29296956 FN3632-S SNP T -> A AC=1;AN=190;BQB=0.919599;DP=2759;DP4=1466,1181,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93111e-08;MQSB=0.931449;RPB=0.951233;SGB=53.6492;VDB=0.139941;EFF=INTRON(MODIFIER||||914|LOC_Os03g51220|protein_coding|CODING|LOC_Os03g51220.1|1|1) FN619-S.SNP.3:29298289 chr03:029298289 0 W/29298289-29298289 FN619-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g51220 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN513-S.SNP.3:29301829 chr03:029301829 0 W/29301829-29301829 FN513-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3594-S.SNP.3:29302680 chr03:029302680 0 W/29302680-29302680 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.963112;DP=2702;DP4=1174,1431,2,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.11119e-08;MQSB=0.999968;RPB=0.475674;SGB=32.441;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.3:29302770 chr03:029302770 0 W/29302770-29302770 FN2455 SNP G -> T AC=1;AN=200;BQB=0.916762;DP=4456;DP4=1991,2131,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35435e-14;MQSB=0.499154;RPB=0.99026;SGB=23.9365;VDB=0.923166;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.3:29310073 chr03:029310073 0 W/29310073-29310073 FN1382-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g51230 SNF2 family N-terminal domain containing protein, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3509-S.SNP.3:29310960 chr03:029310960 0 W/29310960-29310960 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.239486;DP=3087;DP4=1359,1587,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000321169;MQSB=0.980285;RPB=0.867734;SGB=28.8977;VDB=0.737713;EFF=INTRON(MODIFIER||||849|LOC_Os03g51230|protein_coding|CODING|LOC_Os03g51230.1|13|1),INTRON(MODIFIER||||849|LOC_Os03g51230|protein_coding|CODING|LOC_Os03g51230.2|14|1) FN_398-3-4-5.SNP.3:29311816 chr03:029311816 0 W/29311816-29311816 FN_398-3-4-5 Single Base Substitution G-C INTERGENIC HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN4128-S.SNP.3:29328655 chr03:029328655 0 W/29328655-29328655 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.886853;DP=2861;DP4=1343,1438,2,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.55207e-09;MQSB=0.945754;RPB=0.321005;SGB=20.6332;VDB=0.180627;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.3:29329600 chr03:029329600 0 W/29329600-29329600 FN939-S Single Base Substitution C-T INTRON HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN866-S.SNP.3:29334070 chr03:029334070 0 W/29334070-29334070 FN866-S Single Base Substitution T-C INTRON HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN1497-S.SNP.3:29335755 chr03:029335755 0 W/29335755-29335755 FN1497-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. W450-6-1.SNP.3:29337413 chr03:029337413 0 W/29337413-29337413 W450-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2532-S.SNP.3:29366049 chr03:029366049 0 W/29366049-29366049 FN2532-S SNP T -> A AC=1;AN=198;BQB=0.355793;DP=4261;DP4=2050,2014,9,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38142e-15;MQSB=0.963551;RPB=0.99267;SGB=86.8856;VDB=0.287913;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.3:29369168 chr03:029369168 0 W/29369168-29369168 FN989-S Single Base Substitution T-C INTERGENIC HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1480-S.SNP.3:29369954 chr03:029369954 0 W/29369954-29369954 FN1480-S Single Base Substitution G-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN3319-S.SNP.3:29372757 chr03:029372757 0 W/29372757-29372757 FN3319-S SNP G -> C AC=1;AN=184;BQB=0.957186;DP=3008;DP4=1203,1709,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.15232e-11;MQSB=0.94445;RPB=0.727875;SGB=49.835;VDB=0.359373;EFF=UTR_3_PRIME(MODIFIER||32||578|LOC_Os03g51330|protein_coding|CODING|LOC_Os03g51330.1|1|1) FN1150-S.SNP.3:29380812 chr03:029380812 0 W/29380812-29380812 FN1150-S Single Base Substitution C-G INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2541-S.SNP.3:29384236 chr03:029384236 0 W/29384236-29384236 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.790346;DP=4026;DP4=1774,1969,19,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.90949e-15;MQSB=0.832409;RPB=0.950812;SGB=60.4858;VDB=0.157149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.3:29384783 chr03:029384783 0 W/29384783-29384783 FN3940-S SNP A -> G AC=2;AN=158;BQB=0.7645;DP=2274;DP4=1099,1092,14,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.37813e-13;MQSB=0.93555;RPB=0.145031;SGB=77.8763;VDB=0.0290276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.3:29385404 chr03:029385404 0 W/29385404-29385404 FN1228-S Single Base Substitution C-G INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1228-S.SNP.3:29385413 chr03:029385413 0 W/29385413-29385413 FN1228-S Single Base Substitution C-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3630-S.SNP.3:29387144 chr03:029387144 0 W/29387144-29387144 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.359058;DP=2563;DP4=1245,1202,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.67135e-06;MQSB=0.328837;RPB=0.974165;SGB=43.2083;VDB=0.905919;EFF=INTRON(MODIFIER||||173|LOC_Os03g51350|protein_coding|CODING|LOC_Os03g51350.1|2|1) FN4144-S.SNP.3:29387144 chr03:029387144 0 W/29387144-29387144 FN4144-S SNP C -> T AC=2;AN=170;BQB=0.97908;DP=2133;DP4=1068,968,4,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.69074e-08;MQSB=0.888347;RPB=0.857047;SGB=31.4354;VDB=0.82583;EFF=INTRON(MODIFIER||||173|LOC_Os03g51350|protein_coding|CODING|LOC_Os03g51350.1|2|1) FN859-S.SNP.3:29387144 chr03:029387144 0 W/29387144-29387144 FN859-S Single Base Substitution C-T INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2607-S.SNP.3:29387940 chr03:029387940 0 W/29387940-29387940 FN2607-S SNP T -> C AC=1;AN=198;BQB=0.776337;DP=3754;DP4=1497,1842,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000192811;MQSB=0.985645;RPB=0.97235;SGB=11.1786;VDB=0.211686;EFF=UTR_3_PRIME(MODIFIER||265||173|LOC_Os03g51350|protein_coding|CODING|LOC_Os03g51350.1|3|1) FN734-S.SNP.3:29390429 chr03:029390429 0 W/29390429-29390429 FN734-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3293-S.SNP.3:29393522 chr03:029393522 0 W/29393522-29393522 FN3293-S SNP C -> A AC=2;AN=184;BQB=0.955052;DP=3153;DP4=1352,1563,15,19;HOB=0.0215028;ICB=0.494625;MQ=29;MQ0F=0.121789;MQB=0.710565;MQSB=0.330583;RPB=0.929821;SGB=109.705;VDB=0.355891;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.3:29395258 chr03:029395258 0 W/29395258-29395258 FN-181 Single Base Substitution G-A INTERGENIC HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-299.SNP.3:29400125 chr03:029400125 0 W/29400125-29400125 FN-299 Single Base Substitution T-G INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2554-S.SNP.3:29401805 chr03:029401805 0 W/29401805-29401805 FN2554-S SNP C -> A AC=1;AN=198;BQB=0.993315;DP=4186;DP4=2046,1915,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.71279e-13;MQSB=0.93241;RPB=0.840575;SGB=68.91;VDB=0.629359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.3:29406330 chr03:029406330 0 W/29406330-29406330 FN3814-S SNP G -> A AC=1;AN=190;BQB=0.999567;DP=2940;DP4=1198,1579,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.99515e-08;MQSB=0.894788;RPB=0.475165;SGB=58.2031;VDB=0.607375;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.3:29406493 chr03:029406493 0 W/29406493-29406493 FN3740-S SNP T -> A AC=1;AN=190;BQB=0.785503;DP=3450;DP4=1556,1789,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63746e-08;MQSB=0.851618;RPB=0.945022;SGB=50.3161;VDB=0.831984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.3:29409536 chr03:029409536 0 W/29409536-29409536 FN2388 SNP G -> A AC=2;AN=200;BQB=0.856783;DP=4762;DP4=2279,2215,36,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.82518e-28;MQSB=0.656406;RPB=0.99934;SGB=177.266;VDB=0.830345;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.3:29411070 chr03:029411070 0 W/29411070-29411070 FN2089-S SNP G -> A AC=1;AN=168;BQB=0.00862974;DP=3371;DP4=2068,1256,14,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.10327e-07;MQSB=0.998886;RPB=0.88565;SGB=-15.3725;VDB=0.186407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.3:29412241 chr03:029412241 0 W/29412241-29412241 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.544841;DP=3379;DP4=1395,1852,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.5185e-07;MQSB=0.985648;RPB=0.624944;SGB=39.6545;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.3:29412601 chr03:029412601 0 W/29412601-29412601 FN2317 SNP C -> T AC=1;AN=192;BQB=0.108644;DP=4942;DP4=2181,2362,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.31031e-06;MQSB=0.671178;RPB=0.976306;SGB=-78.8817;VDB=0.681711;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.3:29418318 chr03:029418318 0 W/29418318-29418318 FN-325 Single Base Substitution C-T INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN734-S.SNP.3:29418953 chr03:029418953 0 W/29418953-29418953 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN-36.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN-36 Single Base Substitution C-A INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1119-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN1119-S Single Base Substitution C-A INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1262-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN1262-S Single Base Substitution C-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1657-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN1657-S Single Base Substitution C-A INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2181-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN2181-S SNP C -> A AC=1;AN=190;BQB=0.994311;DP=4923;DP4=2347,2304,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.648e-12;MQSB=0.96312;RPB=0.120018;SGB=33.8752;VDB=0.448561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN2442 SNP C -> A AC=1;AN=200;BQB=0.929271;DP=4804;DP4=2261,2326,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020816;MQB=4.62032e-09;MQSB=0.94398;RPB=0.870949;SGB=47.4799;VDB=0.0899844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.949802;DP=4353;DP4=2085,2056,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68391e-11;MQSB=0.931528;RPB=0.999529;SGB=68.91;VDB=0.539327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN2692-S SNP C -> A AC=2;AN=200;BQB=0.437642;DP=4885;DP4=2383,2265,29,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.53819e-31;MQSB=0.980804;RPB=0.971355;SGB=195.292;VDB=0.949932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN3342-S SNP C -> A AC=2;AN=184;BQB=0.98781;DP=3088;DP4=1514,1459,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.43979e-15;MQSB=0.991749;RPB=0.229415;SGB=58.5801;VDB=0.243627;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN412-S Single Base Substitution C-A INTERGENIC HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN566-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN566-S Single Base Substitution C-A INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN661-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN661-S Single Base Substitution C-A INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN875-S.SNP.3:29419488 chr03:029419488 0 W/29419488-29419488 FN875-S Single Base Substitution C-A INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3509-S.SNP.3:29419584 chr03:029419584 0 W/29419584-29419584 FN3509-S SNP T -> G AC=1;AN=188;BQB=0.980157;DP=2863;DP4=1442,1327,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.74462e-10;MQSB=0.999624;RPB=0.905716;SGB=71.6954;VDB=0.275964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.3:29420722 chr03:029420722 0 W/29420722-29420722 FN2351 SNP C -> T AC=1;AN=192;BQB=0.928457;DP=4943;DP4=2233,2439,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.52699e-10;MQSB=0.326889;RPB=0.586655;SGB=81.1609;VDB=0.936378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.3:29420854 chr03:029420854 0 W/29420854-29420854 FN2573-S SNP G -> T AC=2;AN=198;BQB=0.309638;DP=3926;DP4=2032,1593,20,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.84537e-14;MQSB=0.5066;RPB=0.799786;SGB=79.6954;VDB=0.338612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.3:29422095 chr03:029422095 0 W/29422095-29422095 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.486697;DP=4680;DP4=1952,2421,5,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13171e-11;MQSB=0.783878;RPB=0.894339;SGB=19.1209;VDB=0.847835;EFF=INTRON(MODIFIER||||299|LOC_Os03g51430|protein_coding|CODING|LOC_Os03g51430.2|1|1),INTRON(MODIFIER||||299|LOC_Os03g51430|protein_coding|CODING|LOC_Os03g51430.1|1|1) FN4155-S.SNP.3:29422245 chr03:029422245 0 W/29422245-29422245 FN4155-S SNP A -> G AC=1;AN=170;BQB=0.742755;DP=2552;DP4=1404,1065,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.6423e-07;MQSB=0.981838;RPB=0.958644;SGB=52.3148;VDB=0.978123;EFF=INTRON(MODIFIER||||299|LOC_Os03g51430|protein_coding|CODING|LOC_Os03g51430.2|1|1),INTRON(MODIFIER||||299|LOC_Os03g51430|protein_coding|CODING|LOC_Os03g51430.1|1|1) FN_772-3-1.SNP.3:29426319 chr03:029426319 0 W/29426319-29426319 FN_772-3-1 Single Base Substitution C-T Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2188-S.SNP.3:29431536 chr03:029431536 0 W/29431536-29431536 FN2188-S SNP T -> C AC=1;AN=190;BQB=0.814197;DP=4889;DP4=2736,1804,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22695e-13;MQSB=0.77183;RPB=0.999031;SGB=75.1932;VDB=0.480074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.3:29433879 chr03:029433879 0 W/29433879-29433879 FN3421-S SNP A -> T AC=1;AN=184;BQB=0.908453;DP=3143;DP4=1552,1369,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.21805e-07;MQSB=0.999987;RPB=0.453888;SGB=42.7914;VDB=0.539953;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.3:29434408 chr03:029434408 0 W/29434408-29434408 FN598-S Single Base Substitution T-C INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN-235.SNP.3:29437026 chr03:029437026 0 W/29437026-29437026 FN-235 Single Base Substitution A-G INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN996-S.SNP.3:29437634 chr03:029437634 0 W/29437634-29437634 FN996-S Single Base Substitution G-C INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN-235.SNP.3:29438823 chr03:029438823 0 W/29438823-29438823 FN-235 Single Base Substitution C-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-235.SNP.3:29438824 chr03:029438824 0 W/29438824-29438824 FN-235 Single Base Substitution G-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2655-S.SNP.3:29440313 chr03:029440313 0 W/29440313-29440313 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.800741;DP=4670;DP4=2201,2222,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27573e-14;MQSB=0.973059;RPB=0.7959;SGB=83.5316;VDB=0.791597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.3:29440832 chr03:029440832 0 W/29440832-29440832 FN1115-S Single Base Substitution A-G INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1577-S.SNP.3:29447520 chr03:029447520 0 W/29447520-29447520 FN1577-S Single Base Substitution C-T INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-140.SNP.3:29447784 chr03:029447784 0 W/29447784-29447784 FN-140 Single Base Substitution T-C INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1322-S.SNP.3:29450160 chr03:029450160 0 W/29450160-29450160 FN1322-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN4098-S.SNP.3:29453638 chr03:029453638 0 W/29453638-29453638 FN4098-S SNP G -> T AC=1;AN=182;BQB=0.999062;DP=3624;DP4=2049,1491,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.0952e-09;MQSB=0.920981;RPB=0.228647;SGB=57.644;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.3:29454151 chr03:029454151 0 W/29454151-29454151 FN2442 SNP A -> G AC=1;AN=200;BQB=0.714794;DP=3095;DP4=922,2032,4,4;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0151858;MQB=0.0163235;MQSB=2.35656e-09;RPB=0.729267;SGB=18.639;VDB=0.791433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.3:29457365 chr03:029457365 0 W/29457365-29457365 FN2358 SNP G -> T AC=1;AN=192;BQB=0.981582;DP=4437;DP4=2250,1887,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.06824e-10;MQSB=0.991708;RPB=0.998712;SGB=28.9139;VDB=0.462835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R274S|339|LOC_Os03g51490|protein_coding|CODING|LOC_Os03g51490.1|1|1),UTR_3_PRIME(MODIFIER||596||215|LOC_Os03g51479|protein_coding|CODING|LOC_Os03g51479.2|9|1),UTR_3_PRIME(MODIFIER||520||322|LOC_Os03g51479|protein_coding|CODING|LOC_Os03g51479.1|7|1) FN3448-S.SNP.3:29466340 chr03:029466340 0 W/29466340-29466340 FN3448-S SNP G -> T AC=1;AN=184;BQB=0.994055;DP=2417;DP4=1062,1284,2,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.00973e-05;MQSB=0.991667;RPB=0.994673;SGB=26.1347;VDB=0.814142;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.3:29468234 chr03:029468234 0 W/29468234-29468234 FN3364-S SNP A -> T AC=1;AN=184;BQB=0.999915;DP=3164;DP4=1632,1255,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10161e-09;MQSB=0.947875;RPB=0.952703;SGB=49.835;VDB=0.630073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E184D|1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E184D|1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.1|1|1) FN4325-S.SNP.3:29471887 chr03:029471887 0 W/29471887-29471887 FN4325-S SNP C -> A AC=1;AN=170;BQB=0.969169;DP=2659;DP4=1404,1195,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.69478e-05;MQSB=0.987444;RPB=0.799522;SGB=30.1021;VDB=0.566336;EFF=INTRON(MODIFIER||||1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.1|5|1),INTRON(MODIFIER||||1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.2|5|1) FN1493-S.SNP.3:29473394 chr03:029473394 0 W/29473394-29473394 FN1493-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os03g51520 fip1 motif family protein, expressed SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN4135-S.SNP.3:29474200 chr03:029474200 0 W/29474200-29474200 FN4135-S SNP T -> C AC=2;AN=182;BQB=0.998484;DP=2944;DP4=1349,1476,17,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.98104e-20;MQSB=0.960335;RPB=0.648595;SGB=134.329;VDB=0.609744;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L714|1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.1|9|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L714|1379|LOC_Os03g51520|protein_coding|CODING|LOC_Os03g51520.2|9|1) FN2204-S.SNP.3:29479701 chr03:029479701 0 W/29479701-29479701 FN2204-S SNP T -> A AC=1;AN=190;BQB=0.946936;DP=4120;DP4=1656,2077,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.88116e-15;MQSB=0.0104576;RPB=0.71602;SGB=85.8548;VDB=0.63972;EFF=UTR_3_PRIME(MODIFIER||11||116|LOC_Os03g51530|protein_coding|CODING|LOC_Os03g51530.1|1|1) FN2204-S.SNP.3:29479702 chr03:029479702 0 W/29479702-29479702 FN2204-S SNP A -> T AC=1;AN=190;BQB=0.940027;DP=4105;DP4=1669,1998,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.63716e-15;MQSB=0.00465698;RPB=0.915151;SGB=-6.02158;VDB=0.81447;EFF=UTR_3_PRIME(MODIFIER||12||116|LOC_Os03g51530|protein_coding|CODING|LOC_Os03g51530.1|1|1) FN2204-S.SNP.3:29479708 chr03:029479708 0 W/29479708-29479708 FN2204-S SNP T -> G AC=1;AN=190;BQB=0.831574;DP=4108;DP4=1709,2109,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.47123e-16;MQSB=0.00274125;RPB=0.956589;SGB=54.3062;VDB=0.699024;EFF=UTR_3_PRIME(MODIFIER||18||116|LOC_Os03g51530|protein_coding|CODING|LOC_Os03g51530.1|1|1) FN2095-S.SNP.3:29482809 chr03:029482809 0 W/29482809-29482809 FN2095-S SNP A -> G AC=1;AN=168;BQB=0.00624155;DP=3607;DP4=1761,1816,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.45035e-06;MQSB=0.924242;RPB=0.273762;SGB=-136.635;VDB=0.241953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.3:29485387 chr03:029485387 0 W/29485387-29485387 FN3399-S SNP C -> A AC=1;AN=184;BQB=0.921682;DP=2603;DP4=1124,1412,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000384172;MQB=1.27437e-05;MQSB=0.998424;RPB=0.846584;SGB=39.699;VDB=0.298765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.3:29485884 chr03:029485884 0 W/29485884-29485884 FN2607-S SNP G -> C AC=1;AN=198;BQB=0.247358;DP=3750;DP4=1583,1914,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.69593e-08;MQSB=0.287811;RPB=0.374289;SGB=54.144;VDB=0.357225;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.3:29493114 chr03:029493114 0 W/29493114-29493114 FN491-S Single Base Substitution A-T INTRON HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2454.SNP.3:29494782 chr03:029494782 0 W/29494782-29494782 FN2454 SNP G -> A AC=1;AN=200;BQB=0.998039;DP=4635;DP4=2188,2195,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.53591e-07;MQSB=0.587172;RPB=0.943525;SGB=40.4492;VDB=0.73483;EFF=INTRON(MODIFIER||||72|LOC_Os03g51556|protein_coding|CODING|LOC_Os03g51556.1|1|1) FN2724-S.SNP.3:29497643 chr03:029497643 0 W/29497643-29497643 FN2724-S SNP C -> A AC=1;AN=200;BQB=0.420706;DP=5547;DP4=2426,2809,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.03955e-12;MQSB=0.9159;RPB=0.877447;SGB=-37.2897;VDB=0.330537;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.3:29498919 chr03:029498919 0 W/29498919-29498919 FN-169 Single Base Substitution A-T INTERGENIC HOMO SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2173-S.SNP.3:29504926 chr03:029504926 0 W/29504926-29504926 FN2173-S SNP C -> T AC=2;AN=168;BQB=0.930975;DP=3589;DP4=1913,1606,19,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.42808e-20;MQSB=0.995611;RPB=0.771107;SGB=120.518;VDB=0.444757;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.3:29505186 chr03:029505186 0 W/29505186-29505186 FN3835-S SNP T -> C AC=1;AN=190;BQB=0.994166;DP=2718;DP4=1508,1099,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.61482e-08;MQSB=0.969164;RPB=0.837816;SGB=21.1058;VDB=0.952373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3690-S.SNP.3:29506790 chr03:029506790 0 W/29506790-29506790 FN3690-S SNP A -> G AC=2;AN=190;BQB=0.554786;DP=2018;DP4=877,1011,7,5;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.000113609;MQSB=0.0173214;RPB=0.74504;SGB=32.5467;VDB=0.0640986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.3:29514613 chr03:029514613 0 W/29514613-29514613 FN3297-S SNP T -> G AC=1;AN=184;BQB=0.999643;DP=3212;DP4=1643,1458,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.1367e-09;MQSB=0.995422;RPB=0.975058;SGB=46.3132;VDB=0.5;EFF=INTRON(MODIFIER||||84|LOC_Os03g51570|protein_coding|CODING|LOC_Os03g51570.1|3|1) FN3729-S.SNP.3:29516528 chr03:029516528 0 W/29516528-29516528 FN3729-S SNP C -> A AC=1;AN=190;BQB=0.992262;DP=2129;DP4=684,1359,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=4.5522e-11;MQSB=0.1781;RPB=0.980999;SGB=57.4238;VDB=0.0509318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.3:29517619 chr03:029517619 0 W/29517619-29517619 FN3910-S SNP G -> A AC=1;AN=158;BQB=0.845785;DP=2682;DP4=1371,1200,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.66871e-07;MQSB=0.723613;RPB=0.990966;SGB=34.0735;VDB=0.745908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G206D|359|LOC_Os03g51580|protein_coding|CODING|LOC_Os03g51580.1|3|1) FN2661-S.SNP.3:29523171 chr03:029523171 0 W/29523171-29523171 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.997799;DP=4584;DP4=1855,2287,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18171e-08;MQSB=0.999668;RPB=0.975827;SGB=72.6852;VDB=0.00749403;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.3:29524177 chr03:029524177 0 W/29524177-29524177 FN979-S Single Base Substitution G-A INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3553-S.SNP.3:29528926 chr03:029528926 0 W/29528926-29528926 FN3553-S SNP G -> T AC=1;AN=188;BQB=0.989136;DP=3141;DP4=1316,1763,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3931e-12;MQSB=0.970577;RPB=0.809907;SGB=80.782;VDB=0.223951;EFF=UTR_3_PRIME(MODIFIER||188||451|LOC_Os03g51600|protein_coding|CODING|LOC_Os03g51600.1|4|1),UTR_3_PRIME(MODIFIER||188||433|LOC_Os03g51600|protein_coding|CODING|LOC_Os03g51600.2|5|1) FN3630-S.SNP.3:29532960 chr03:029532960 0 W/29532960-29532960 FN3630-S SNP T -> C AC=1;AN=190;BQB=0.779185;DP=1916;DP4=789,1009,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000161589;MQSB=0.827314;RPB=0.192315;SGB=39.9877;VDB=0.515534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.3:29533626 chr03:029533626 0 W/29533626-29533626 FN1577-S Single Base Substitution A-G INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. W464-2-1.SNP.3:29535744 chr03:029535744 0 W/29535744-29535744 W464-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2160-S.SNP.3:29546045 chr03:029546045 0 W/29546045-29546045 FN2160-S SNP T -> C AC=1;AN=168;BQB=0.88406;DP=3950;DP4=2073,1850,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.04911e-06;MQSB=0.992663;RPB=0.998244;SGB=12.4615;VDB=0.948079;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V306|743|LOC_Os03g51620|protein_coding|CODING|LOC_Os03g51620.1|7|1) FN3312-S.SNP.3:29557725 chr03:029557725 0 W/29557725-29557725 FN3312-S SNP T -> G AC=1;AN=184;BQB=0.90358;DP=2898;DP4=1385,1390,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.16381e-07;MQSB=0.789966;RPB=0.532987;SGB=44.2207;VDB=0.638963;EFF=INTRON(MODIFIER||||410|LOC_Os03g51640|protein_coding|CODING|LOC_Os03g51640.1|1|1) FN2268-S.SNP.3:29566207 chr03:029566207 0 W/29566207-29566207 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.855279;DP=4404;DP4=2228,1884,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41031e-13;MQSB=0.813727;RPB=0.947028;SGB=112.85;VDB=0.627771;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.3:29567279 chr03:029567279 0 W/29567279-29567279 FN1537-S Single Base Substitution C-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2398.SNP.3:29575922 chr03:029575922 0 W/29575922-29575922 FN2398 SNP A -> T AC=1;AN=200;BQB=0.966055;DP=4638;DP4=2373,1991,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.68566e-11;MQSB=0.874838;RPB=0.429205;SGB=69.1109;VDB=0.534313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.3:29581713 chr03:029581713 0 W/29581713-29581713 FN3762-S SNP C -> A AC=1;AN=190;BQB=0.934609;DP=2359;DP4=948,1346,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.24124e-05;MQSB=0.0413161;RPB=0.890594;SGB=39.9877;VDB=0.682972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.3:29583366 chr03:029583366 0 W/29583366-29583366 FN-104 Single Base Substitution G-C INTRON HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1668-S.SNP.3:29588685 chr03:029588685 0 W/29588685-29588685 FN1668-S SNP G -> A AC=1;AN=188;BQB=0.371127;DP=3642;DP4=1836,1765,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.85349e-10;MQSB=0.985816;RPB=0.245111;SGB=33.7061;VDB=0.735791;EFF=INTRON(MODIFIER||||385|LOC_Os03g51670|protein_coding|CODING|LOC_Os03g51670.1|4|1),INTRON(MODIFIER||||324|LOC_Os03g51670|protein_coding|CODING|LOC_Os03g51670.2|4|1) FN2618-S.SNP.3:29595502 chr03:029595502 0 W/29595502-29595502 FN2618-S SNP C -> A AC=1;AN=198;BQB=0.634159;DP=3638;DP4=1827,1611,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71162e-12;MQSB=0.0851984;RPB=0.880633;SGB=79.6954;VDB=0.559893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A16S|360|LOC_Os03g51680|protein_coding|CODING|LOC_Os03g51680.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A16S|308|LOC_Os03g51680|protein_coding|CODING|LOC_Os03g51680.2|1|1) FN2539-S.SNP.3:29599729 chr03:029599729 0 W/29599729-29599729 FN2539-S SNP C -> A AC=1;AN=198;BQB=0.892652;DP=3981;DP4=1968,1801,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.29738e-13;MQSB=0.443384;RPB=0.051104;SGB=50.1053;VDB=0.15799;EFF=INTRON(MODIFIER||||361|LOC_Os03g51690|protein_coding|CODING|LOC_Os03g51690.1|3|1),INTRON(MODIFIER||||361|LOC_Os03g51690|protein_coding|CODING|LOC_Os03g51690.2|4|1),INTRON(MODIFIER||||242|LOC_Os03g51690|protein_coding|CODING|LOC_Os03g51690.3|2|1) FN1093-S.SNP.3:29610961 chr03:029610961 0 W/29610961-29610961 FN1093-S Single Base Substitution G-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4120-S.SNP.3:29617575 chr03:029617575 0 W/29617575-29617575 FN4120-S SNP T -> C AC=1;AN=182;BQB=0.918454;DP=2180;DP4=1300,788,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.62243e-09;MQSB=0.596298;RPB=0.999999;SGB=66.6657;VDB=0.668172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.3:29617576 chr03:029617576 0 W/29617576-29617576 FN2172-S SNP A -> G AC=2;AN=168;BQB=0.0265916;DP=3066;DP4=1552,1434,19,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.95608e-14;MQSB=0.999753;RPB=0.0211546;SGB=-9.7719;VDB=0.511712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.3:29617843 chr03:029617843 0 W/29617843-29617843 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.874889;DP=4732;DP4=2184,2282,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.49104e-16;MQSB=0.783125;RPB=0.445858;SGB=-8.87404;VDB=0.613569;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.3:29618849 chr03:029618849 0 W/29618849-29618849 FN4163-S SNP T -> C AC=2;AN=170;BQB=0.983629;DP=2306;DP4=1141,1075,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.74915e-12;MQSB=0.902219;RPB=0.929767;SGB=92.2986;VDB=0.109714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.3:29621867 chr03:029621867 0 W/29621867-29621867 FN1271-S Single Base Substitution C-T INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2316.SNP.3:29635876 chr03:029635876 0 W/29635876-29635876 FN2316 SNP G -> A AC=2;AN=192;BQB=0.843445;DP=4811;DP4=2047,2322,25,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.83801e-26;MQSB=0.828764;RPB=0.685855;SGB=100.716;VDB=0.302113;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.3:29642638 chr03:029642638 0 W/29642638-29642638 FN1687-S SNP G -> A AC=2;AN=188;BQB=0.995742;DP=2561;DP4=1466,1047,15,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.65567e-18;MQSB=0.884143;RPB=0.671543;SGB=110.393;VDB=0.890381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.3:29643569 chr03:029643569 0 W/29643569-29643569 FN3466-S SNP A -> C AC=1;AN=184;BQB=0.996252;DP=2463;DP4=1185,1177,18,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92037e-14;MQSB=0.987954;RPB=0.587933;SGB=103.004;VDB=0.310559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.3:29652822 chr03:029652822 0 W/29652822-29652822 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.123103;DP=4225;DP4=1943,2091,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.18897e-05;MQSB=0.962798;RPB=0.0782539;SGB=21.559;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.3:29669829 chr03:029669829 0 W/29669829-29669829 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN554-S.SNP.3:29683698 chr03:029683698 0 W/29683698-29683698 FN554-S Single Base Substitution A-T INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3802-S.SNP.3:29692027 chr03:029692027 0 W/29692027-29692027 FN3802-S SNP G -> T AC=2;AN=190;BQB=0.791845;DP=2739;DP4=1470,1183,15,10;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0430814;MQB=0.000118099;MQSB=0.0485258;RPB=0.0933578;SGB=108.296;VDB=0.433903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G944C|1073|LOC_Os03g51770|protein_coding|CODING|LOC_Os03g51770.1|2|1) FN3802-S.SNP.3:29692028 chr03:029692028 0 W/29692028-29692028 FN3802-S SNP G -> T AC=2;AN=190;BQB=0.962277;DP=2736;DP4=1457,1189,17,11;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0438596;MQB=0.000313602;MQSB=0.0545687;RPB=0.07343;SGB=89.4087;VDB=0.28279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G944V|1073|LOC_Os03g51770|protein_coding|CODING|LOC_Os03g51770.1|2|1) FN1492-S.SNP.3:29692433 chr03:029692433 0 W/29692433-29692433 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN3811-S.SNP.3:29712584 chr03:029712584 0 W/29712584-29712584 FN3811-S SNP A -> T AC=1;AN=190;BQB=0.302976;DP=2636;DP4=1174,1128,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000122078;MQSB=0.999995;RPB=0.440019;SGB=-17.0991;VDB=0.387829;EFF=INTRON(MODIFIER||||639|LOC_Os03g51790|protein_coding|CODING|LOC_Os03g51790.1|11|1) FN4126-S.SNP.3:29714552 chr03:029714552 0 W/29714552-29714552 FN4126-S SNP C -> T AC=1;AN=182;BQB=0.996298;DP=2342;DP4=1385,869,12,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.98402e-09;MQSB=0.966583;RPB=0.427046;SGB=46.1603;VDB=0.957408;EFF=INTRON(MODIFIER||||639|LOC_Os03g51790|protein_coding|CODING|LOC_Os03g51790.1|11|1) FN3763-S.SNP.3:29716889 chr03:029716889 0 W/29716889-29716889 FN3763-S SNP T -> A AC=1;AN=190;BQB=0.996253;DP=2316;DP4=1155,1082,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36905e-09;MQSB=0.486919;RPB=0.786184;SGB=62.7569;VDB=0.102778;EFF=INTRON(MODIFIER||||639|LOC_Os03g51790|protein_coding|CODING|LOC_Os03g51790.1|11|1) FN3525-S.SNP.3:29720853 chr03:029720853 0 W/29720853-29720853 FN3525-S SNP C -> G AC=2;AN=188;BQB=0.694586;DP=2654;DP4=1333,1202,15,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.02106e-11;MQSB=0.672899;RPB=0.253301;SGB=10.1681;VDB=0.630538;EFF=INTRON(MODIFIER||||639|LOC_Os03g51790|protein_coding|CODING|LOC_Os03g51790.1|1|1) FN-164.SNP.3:29722617 chr03:029722617 0 W/29722617-29722617 FN-164 Single Base Substitution G-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN4134-S.SNP.3:29723138 chr03:029723138 0 W/29723138-29723138 FN4134-S SNP G -> A AC=2;AN=182;BQB=0.806485;DP=3163;DP4=1481,1579,16,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000316156;MQB=4.66846e-19;MQSB=0.98968;RPB=0.962577;SGB=123.399;VDB=0.386418;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.3:29733628 chr03:029733628 0 W/29733628-29733628 FN796-S Single Base Substitution T-C INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2784-S.SNP.3:29741813 chr03:029741813 0 W/29741813-29741813 FN2784-S SNP T -> A AC=1;AN=198;BQB=0.847796;DP=3837;DP4=1562,1934,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00026062;MQB=1.93092e-13;MQSB=0.454673;RPB=0.935432;SGB=79.6954;VDB=0.739794;EFF=UTR_5_PRIME(MODIFIER||183||472|LOC_Os03g51870|protein_coding|CODING|LOC_Os03g51870.1|1|1) FN1301-S.SNP.3:29742500 chr03:029742500 0 W/29742500-29742500 FN1301-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g51870 FHA domain containing protein, putative, expressed SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2397.SNP.3:29745978 chr03:029745978 0 W/29745978-29745978 FN2397 SNP G -> C AC=2;AN=200;BQB=0.940177;DP=4716;DP4=2310,2115,15,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.7081e-21;MQSB=0.996711;RPB=0.522543;SGB=84.1935;VDB=0.543985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N129K|139|LOC_Os03g51880|protein_coding|CODING|LOC_Os03g51880.1|3|1) FN1274-S.SNP.3:29749192 chr03:029749192 0 W/29749192-29749192 FN1274-S Single Base Substitution T-A INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1735-S.SNP.3:29750257 chr03:029750257 0 W/29750257-29750257 FN1735-S SNP C -> T AC=2;AN=188;BQB=0.997123;DP=3770;DP4=1777,1918,27,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.15095e-30;MQSB=0.988677;RPB=0.749779;SGB=70.3566;VDB=0.052585;EFF=INTRON(MODIFIER||||222|LOC_Os03g51890|protein_coding|CODING|LOC_Os03g51890.1|7|1) FN3752-S.SNP.3:29762043 chr03:029762043 0 W/29762043-29762043 FN3752-S SNP T -> A AC=1;AN=190;BQB=0.419335;DP=2873;DP4=1424,1342,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0118343;MQB=0.000258285;MQSB=0.135337;RPB=0.91805;SGB=-17.653;VDB=0.351251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.3:29767303 chr03:029767303 0 W/29767303-29767303 FN2653-S SNP A -> G AC=1;AN=200;BQB=0.998462;DP=5089;DP4=2292,2543,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02962e-16;MQSB=0.977814;RPB=0.293657;SGB=90.7419;VDB=0.631023;EFF=INTRON(MODIFIER||||670|LOC_Os03g51900|protein_coding|CODING|LOC_Os03g51900.1|2|1) FN441-S.SNP.3:29773587 chr03:029773587 0 W/29773587-29773587 FN441-S Single Base Substitution A-G INTRON HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2171-S.SNP.3:29774418 chr03:029774418 0 W/29774418-29774418 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.291796;DP=4020;DP4=1695,2291,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000186285;MQSB=0.999708;RPB=0.069347;SGB=-0.101747;VDB=0.7838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.3:29780382 chr03:029780382 0 W/29780382-29780382 FN1506-S Single Base Substitution C-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN-22.SNP.3:29780711 chr03:029780711 0 W/29780711-29780711 FN-22 Single Base Substitution C-T INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN424-S.SNP.3:29786023 chr03:029786023 0 W/29786023-29786023 FN424-S Single Base Substitution T-C INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN473-S.SNP.3:29786594 chr03:029786594 0 W/29786594-29786594 FN473-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g51920 peptidase, M50 family, putative, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN-95.SNP.3:29795939 chr03:029795939 0 W/29795939-29795939 FN-95 Single Base Substitution C-A INTRON HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-95.SNP.3:29795940 chr03:029795940 0 W/29795940-29795940 FN-95 Single Base Substitution T-A INTRON HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3571-S.SNP.3:29796695 chr03:029796695 0 W/29796695-29796695 FN3571-S SNP C -> A AC=1;AN=188;BQB=0.996603;DP=3024;DP4=1424,1479,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.3803e-10;MQSB=0.969257;RPB=0.363843;SGB=62.6088;VDB=0.630955;EFF=INTRON(MODIFIER||||258|LOC_Os03g51950|protein_coding|CODING|LOC_Os03g51950.1|3|1),INTRON(MODIFIER||||192|LOC_Os03g51950|protein_coding|CODING|LOC_Os03g51950.2|3|1) FN3537-S.SNP.3:29799928 chr03:029799928 0 W/29799928-29799928 FN3537-S SNP T -> A AC=1;AN=188;BQB=0.792169;DP=3538;DP4=1889,1498,10,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.43016e-06;MQSB=0.996348;RPB=0.0708624;SGB=28.8977;VDB=0.0319263;EFF=SPLICE_SITE_REGION(LOW||||259|LOC_Os03g51960|protein_coding|CODING|LOC_Os03g51960.1|2|1),INTRON(MODIFIER||||235|LOC_Os03g51960|protein_coding|CODING|LOC_Os03g51960.2|1|1),INTRON(MODIFIER||||259|LOC_Os03g51960|protein_coding|CODING|LOC_Os03g51960.1|2|1) FN1031-S.SNP.3:29805508 chr03:029805508 0 W/29805508-29805508 FN1031-S Single Base Substitution T-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1536-S.SNP.3:29807554 chr03:029807554 0 W/29807554-29807554 FN1536-S Single Base Substitution T-A INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN776-S.SNP.3:29812891 chr03:029812891 0 W/29812891-29812891 FN776-S Single Base Substitution A-T INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3466-S.SNP.3:29818291 chr03:029818291 0 W/29818291-29818291 FN3466-S SNP G -> A AC=2;AN=184;BQB=0.729417;DP=2538;DP4=1116,1346,13,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.78466e-15;MQSB=0.94063;RPB=0.439398;SGB=51.0148;VDB=0.190503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.3:29819057 chr03:029819057 0 W/29819057-29819057 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.83685;DP=2708;DP4=1212,1388,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02133e-07;MQSB=0.935444;RPB=0.0811049;SGB=18.4463;VDB=0.157218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.3:29819957 chr03:029819957 0 W/29819957-29819957 FN3466-S SNP A -> T AC=2;AN=184;BQB=0.878236;DP=1798;DP4=210,1513,2,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000556174;MQB=1.51018e-12;MQSB=0.865205;RPB=0.76497;SGB=81.5311;VDB=0.836128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.3:29822671 chr03:029822671 0 W/29822671-29822671 FN2386 SNP T -> C AC=1;AN=192;BQB=0.835022;DP=5136;DP4=2744,2136,19,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.21612e-16;MQSB=0.993755;RPB=0.977264;SGB=93.2452;VDB=0.711864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.3:29824896 chr03:029824896 0 W/29824896-29824896 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.99819;DP=2724;DP4=1304,1329,19,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.50453e-16;MQSB=0.811517;RPB=0.99785;SGB=116.569;VDB=0.165062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S269F|456|LOC_Os03g51970|protein_coding|CODING|LOC_Os03g51970.1|3|1) FN794-S.SNP.3:29831020 chr03:029831020 0 W/29831020-29831020 FN794-S Single Base Substitution T-A INTRON HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN2292.SNP.3:29833045 chr03:029833045 0 W/29833045-29833045 FN2292 SNP C -> T AC=2;AN=192;BQB=0.606297;DP=4879;DP4=2131,2332,26,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00020496;MQB=4.22289e-25;MQSB=0.996994;RPB=0.751216;SGB=113.537;VDB=0.673799;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.3:29845295 chr03:029845295 0 W/29845295-29845295 FN704-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g52010 lecithin cholesterol acyltransferase, putative, expressed SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN751-S.SNP.3:29847884 chr03:029847884 0 W/29847884-29847884 FN751-S Single Base Substitution A-G INTERGENIC HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN670-S.SNP.3:29848790 chr03:029848790 0 W/29848790-29848790 FN670-S Single Base Substitution T-C INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2657-S.SNP.3:29855228 chr03:029855228 0 W/29855228-29855228 FN2657-S SNP G -> A AC=2;AN=200;BQB=0.172018;DP=4749;DP4=2159,2234,32,48;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.0268e-43;MQSB=0.119019;RPB=0.984276;SGB=312.618;VDB=0.682475;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y17|147|LOC_Os03g52030|protein_coding|CODING|LOC_Os03g52030.1|1|1) FN4146-S.SNP.3:29861801 chr03:029861801 0 W/29861801-29861801 FN4146-S SNP C -> G AC=1;AN=170;BQB=0.989685;DP=2571;DP4=1235,1256,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2235e-10;MQSB=0.98239;RPB=0.840392;SGB=74.528;VDB=0.379113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P184A|403|LOC_Os03g52040|protein_coding|CODING|LOC_Os03g52040.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P184A|483|LOC_Os03g52040|protein_coding|CODING|LOC_Os03g52040.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P184A|462|LOC_Os03g52040|protein_coding|CODING|LOC_Os03g52040.3|5|1) FN565-S.SNP.3:29884297 chr03:029884297 0 W/29884297-29884297 FN565-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN3523-S.SNP.3:29891280 chr03:029891280 0 W/29891280-29891280 FN3523-S SNP A -> T AC=1;AN=188;BQB=0.0638632;DP=2592;DP4=1265,1195,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000724137;MQSB=0.891678;RPB=0.983166;SGB=15.903;VDB=0.606741;EFF=INTRON(MODIFIER||||1217|LOC_Os03g52090|protein_coding|CODING|LOC_Os03g52090.1|33|1) FN687-S.SNP.3:29898834 chr03:029898834 0 W/29898834-29898834 FN687-S Single Base Substitution G-A INTRON HOMO SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2453.SNP.3:29909475 chr03:029909475 0 W/29909475-29909475 FN2453 SNP G -> C AC=2;AN=200;BQB=0.461411;DP=5293;DP4=2529,2452,26,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.79319e-26;MQSB=0.803178;RPB=0.842675;SGB=107.64;VDB=0.705045;EFF=INTRON(MODIFIER||||1217|LOC_Os03g52090|protein_coding|CODING|LOC_Os03g52090.1|4|1) FN559-S.SNP.3:29909475 chr03:029909475 0 W/29909475-29909475 FN559-S Single Base Substitution G-C INTRON HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN761-S.SNP.3:29909475 chr03:029909475 0 W/29909475-29909475 FN761-S Single Base Substitution G-C INTRON HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN_814-7-1.SNP.3:29909475 chr03:029909475 0 W/29909475-29909475 FN_814-7-1 Single Base Substitution G-C HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2112-S.SNP.3:29909958 chr03:029909958 0 W/29909958-29909958 FN2112-S SNP G -> A AC=2;AN=168;BQB=0.975613;DP=3848;DP4=2091,1693,26,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.72989e-25;MQSB=0.998909;RPB=0.901599;SGB=97.54;VDB=0.024573;EFF=INTRON(MODIFIER||||1217|LOC_Os03g52090|protein_coding|CODING|LOC_Os03g52090.1|3|1) FN4065-S.SNP.3:29910480 chr03:029910480 0 W/29910480-29910480 FN4065-S SNP C -> T AC=1;AN=168;BQB=0.999997;DP=2828;DP4=1620,1099,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.98797e-10;MQSB=0.951055;RPB=0.654021;SGB=51.902;VDB=0.0641109;EFF=INTRON(MODIFIER||||1217|LOC_Os03g52090|protein_coding|CODING|LOC_Os03g52090.1|3|1) W598-2-1.SNP.3:29922403 chr03:029922403 0 W/29922403-29922403 W598-2-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g52110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2546-S.SNP.3:29924453 chr03:029924453 0 W/29924453-29924453 FN2546-S SNP C -> T AC=2;AN=198;BQB=0.366994;DP=4531;DP4=2265,2048,16,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00198632;MQB=3.4699e-09;MQSB=2.21882e-06;RPB=0.32162;SGB=50.1053;VDB=0.198677;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.3:29929028 chr03:029929028 0 W/29929028-29929028 FN790-S Single Base Substitution G-A INTRON HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN1317-S.SNP.3:29931920 chr03:029931920 0 W/29931920-29931920 FN1317-S Single Base Substitution T-G INTRON HOMO SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2593-S.SNP.3:29932634 chr03:029932634 0 W/29932634-29932634 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.477093;DP=4015;DP4=1903,1833,24,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.57328e-21;MQSB=0.983509;RPB=0.471254;SGB=91.6272;VDB=0.767044;EFF=UTR_3_PRIME(MODIFIER||197||129|LOC_Os03g52130|protein_coding|CODING|LOC_Os03g52130.1|3|1) FN552-S.SNP.3:29934532 chr03:029934532 0 W/29934532-29934532 FN552-S Single Base Substitution T-A INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN3516-S.SNP.3:29940345 chr03:029940345 0 W/29940345-29940345 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.397763;DP=3032;DP4=1529,1421,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00111557;MQSB=0.955221;RPB=0.235164;SGB=39.8925;VDB=0.340495;EFF=INTRON(MODIFIER||||845|LOC_Os03g52150|protein_coding|CODING|LOC_Os03g52150.1|6|1) FN-101.SNP.3:29943847 chr03:029943847 0 W/29943847-29943847 FN-101 Single Base Substitution G-A INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2454.SNP.3:29944072 chr03:029944072 0 W/29944072-29944072 FN2454 SNP G -> T AC=1;AN=200;BQB=0.86178;DP=4965;DP4=2324,2351,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.74108e-08;MQSB=0.867164;RPB=0.0367918;SGB=33.0593;VDB=0.0288131;EFF=INTRON(MODIFIER||||845|LOC_Os03g52150|protein_coding|CODING|LOC_Os03g52150.1|11|1) FN837-S.SNP.3:29945898 chr03:029945898 0 W/29945898-29945898 FN837-S Single Base Substitution T-C INTRON HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN-106.SNP.3:29948832 chr03:029948832 0 W/29948832-29948832 FN-106 Single Base Substitution C-T INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1040-S.SNP.3:29955617 chr03:029955617 0 W/29955617-29955617 FN1040-S Single Base Substitution T-A INTERGENIC HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN672-S.SNP.3:29963234 chr03:029963234 0 W/29963234-29963234 FN672-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g52190 retrotransposon protein, putative, unclassified, expressed SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3531-S.SNP.3:29965783 chr03:029965783 0 W/29965783-29965783 FN3531-S SNP A -> G AC=1;AN=188;BQB=0.493044;DP=4949;DP4=2345,2172,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.11376;MQB=0.997098;MQSB=1.09988e-21;RPB=0.678936;SGB=-38.278;VDB=0.463904;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K1688E|1851|LOC_Os03g52190|protein_coding|CODING|LOC_Os03g52190.1|3|1) FN3579-S.SNP.3:29969483 chr03:029969483 0 W/29969483-29969483 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.954229;DP=4923;DP4=2546,2279,20,16;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0132033;MQB=0.000194438;MQSB=0.625204;RPB=0.929282;SGB=36.4041;VDB=0.970713;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V154|899|LOC_Os03g52200|protein_coding|CODING|LOC_Os03g52200.1|1|1) FN-53.SNP.3:29989262 chr03:029989262 0 W/29989262-29989262 FN-53 Single Base Substitution T-A INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN-412.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN-412 Single Base Substitution T-A INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN3420-S.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN3420-S SNP T -> A AC=2;AN=184;BQB=0.690329;DP=2614;DP4=1256,1244,11,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.88519e-11;MQSB=0.966855;RPB=0.869707;SGB=30.8405;VDB=0.131678;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN3771-S SNP T -> A AC=2;AN=190;BQB=0.757013;DP=2575;DP4=1210,1239,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16104e-12;MQSB=0.880575;RPB=0.798786;SGB=19.6499;VDB=0.794748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN3886-S SNP T -> A AC=2;AN=158;BQB=0.921566;DP=2254;DP4=1029,1117,8,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.6796e-09;MQSB=0.801932;RPB=0.361288;SGB=50.9207;VDB=0.0400401;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN412-S Single Base Substitution T-A INTERGENIC HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN661-S.SNP.3:29998917 chr03:029998917 0 W/29998917-29998917 FN661-S Single Base Substitution T-A INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2305.SNP.3:30000819 chr03:030000819 0 W/30000819-30000819 FN2305 SNP C -> T AC=2;AN=192;BQB=0.418565;DP=3952;DP4=1846,1332,17,12;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.81321e-10;MQSB=6.06405e-16;RPB=0.5545;SGB=-40.9913;VDB=0.701029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.3:30002624 chr03:030002624 0 W/30002624-30002624 FN1639-S Single Base Substitution C-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3443-S.SNP.3:30007015 chr03:030007015 0 W/30007015-30007015 FN3443-S SNP C -> T AC=1;AN=184;BQB=0.939989;DP=2652;DP4=1154,1399,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.35585e-09;MQSB=0.986624;RPB=0.540478;SGB=57.786;VDB=0.142558;EFF=INTRON(MODIFIER||||790|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.1|3|1),INTRON(MODIFIER||||341|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.2|1|1),INTRON(MODIFIER||||321|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.3|2|1) FN3400-S.SNP.3:30010902 chr03:030010902 0 W/30010902-30010902 FN3400-S SNP C -> A AC=1;AN=184;BQB=0.990774;DP=2388;DP4=1328,995,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77326e-06;MQSB=0.999015;RPB=0.953524;SGB=35.1773;VDB=0.697669;EFF=INTRON(MODIFIER||||790|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.1|4|1),INTRON(MODIFIER||||341|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.2|2|1),INTRON(MODIFIER||||321|LOC_Os03g52239|protein_coding|CODING|LOC_Os03g52239.3|3|1) FN1528-S.SNP.3:30012003 chr03:030012003 0 W/30012003-30012003 FN1528-S Single Base Substitution G-C INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN445-S.SNP.3:30014465 chr03:030014465 0 W/30014465-30014465 FN445-S Single Base Substitution C-T INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN4074-S.SNP.3:30019198 chr03:030019198 0 W/30019198-30019198 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.997001;DP=1878;DP4=1297,532,3,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.97443e-05;MQSB=0.788761;RPB=0.732143;SGB=14.5636;VDB=0.548241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.3:30019404 chr03:030019404 0 W/30019404-30019404 FN3947-S SNP G -> A AC=2;AN=168;BQB=0.95125;DP=2498;DP4=1525,859,28,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.5029e-18;MQSB=0.953637;RPB=0.744936;SGB=158.512;VDB=0.586016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.3:30021409 chr03:030021409 0 W/30021409-30021409 FN2686-S SNP C -> T AC=1;AN=200;BQB=0.855991;DP=4723;DP4=2429,2043,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.38899e-07;MQSB=0.996261;RPB=0.989951;SGB=16.4591;VDB=0.289629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1316-S.SNP.3:30022527 chr03:030022527 0 W/30022527-30022527 FN1316-S Single Base Substitution G-T INTERGENIC HET SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3759-S.SNP.3:30048052 chr03:030048052 0 W/30048052-30048052 FN3759-S SNP A -> G AC=1;AN=190;BQB=0.450889;DP=2844;DP4=1333,1362,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000163008;MQSB=0.971439;RPB=0.91186;SGB=-3.65821;VDB=0.577201;EFF=INTRON(MODIFIER||||227|LOC_Os03g52320|protein_coding|CODING|LOC_Os03g52320.1|1|1) FN-222.SNP.3:30050196 chr03:030050196 0 W/30050196-30050196 FN-222 Single Base Substitution A-T INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2753-S.SNP.3:30058467 chr03:030058467 0 W/30058467-30058467 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.953936;DP=5235;DP4=2203,2729,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96825e-15;MQSB=0.985345;RPB=0.980297;SGB=-9.47921;VDB=0.365199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.3:30059259 chr03:030059259 0 W/30059259-30059259 FN2161-S SNP T -> C AC=1;AN=168;BQB=0.0871812;DP=3312;DP4=1533,1757,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000190006;MQSB=0.967609;RPB=0.987128;SGB=17.5943;VDB=0.461975;EFF=INTRON(MODIFIER||||51|LOC_Os03g52330|protein_coding|CODING|LOC_Os03g52330.1|1|1) FN2112-S.SNP.3:30062699 chr03:030062699 0 W/30062699-30062699 FN2112-S SNP T -> A AC=1;AN=168;BQB=0.005228;DP=4055;DP4=2126,1870,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.44627e-07;MQSB=0.973377;RPB=0.998935;SGB=-145.773;VDB=0.91609;EFF=INTRON(MODIFIER||||474|LOC_Os03g52340|protein_coding|CODING|LOC_Os03g52340.1|9|1),INTRON(MODIFIER||||322|LOC_Os03g52340|protein_coding|CODING|LOC_Os03g52340.2|8|1) FN-182.SNP.3:30067433 chr03:030067433 0 W/30067433-30067433 FN-182 Single Base Substitution C-T INTRON HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN4152-S.SNP.3:30072508 chr03:030072508 0 W/30072508-30072508 FN4152-S SNP C -> A AC=2;AN=170;BQB=0.99336;DP=2689;DP4=1521,1071,23,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.03034e-26;MQSB=0.884206;RPB=0.908653;SGB=131.272;VDB=0.566748;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.3:30072509 chr03:030072509 0 W/30072509-30072509 FN4152-S SNP G -> A AC=2;AN=170;BQB=0.999761;DP=2697;DP4=1527,1091,21,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.21368e-24;MQSB=0.854939;RPB=0.877755;SGB=167.824;VDB=0.538148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.3:30073578 chr03:030073578 0 W/30073578-30073578 FN1140-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN776-S.SNP.3:30076997 chr03:030076997 0 W/30076997-30076997 FN776-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1104-S.SNP.3:30082106 chr03:030082106 0 W/30082106-30082106 FN1104-S Single Base Substitution C-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2426.SNP.3:30086641 chr03:030086641 0 W/30086641-30086641 FN2426 SNP G -> A AC=2;AN=200;BQB=0.941302;DP=4684;DP4=2321,2121,33,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.72346e-37;MQSB=0.763738;RPB=0.54975;SGB=293.733;VDB=0.450364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P243S|318|LOC_Os03g52430|protein_coding|CODING|LOC_Os03g52430.1|8|1) FN-248.SNP.3:30093921 chr03:030093921 0 W/30093921-30093921 FN-248 Single Base Substitution G-A INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2656-S.SNP.3:30099420 chr03:030099420 0 W/30099420-30099420 FN2656-S SNP G -> C AC=2;AN=200;BQB=0.671464;DP=4480;DP4=1920,1962,41,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.84378e-32;MQSB=0.969754;RPB=0.971405;SGB=-214.423;VDB=0.34057;EFF=UTR_3_PRIME(MODIFIER||297||511|LOC_Os03g52460|protein_coding|CODING|LOC_Os03g52460.1|15|1) FN464-S.SNP.3:30101449 chr03:030101449 0 W/30101449-30101449 FN464-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g52460 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN1075-S.SNP.3:30106230 chr03:030106230 0 W/30106230-30106230 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2192-S.SNP.3:30108312 chr03:030108312 0 W/30108312-30108312 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.706143;DP=4230;DP4=1824,2169,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0108747;MQB=9.80875e-05;MQSB=3.61625e-10;RPB=0.9195;SGB=85.5263;VDB=0.407747;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.3:30114951 chr03:030114951 0 W/30114951-30114951 FN-219 Single Base Substitution A-G INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN880-S.SNP.3:30126838 chr03:030126838 0 W/30126838-30126838 FN880-S Single Base Substitution G-A INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3560-S.SNP.3:30128133 chr03:030128133 0 W/30128133-30128133 FN3560-S SNP G -> A AC=2;AN=188;BQB=0.788438;DP=2945;DP4=1403,1395,22,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.86285e-21;MQSB=0.749069;RPB=0.901251;SGB=158.018;VDB=0.0970538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.3:30136614 chr03:030136614 0 W/30136614-30136614 FN3774-S SNP C -> T AC=1;AN=190;BQB=0.740183;DP=2547;DP4=1169,1286,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07797e-08;MQSB=0.99509;RPB=0.45013;SGB=57.4238;VDB=0.911232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.3:30143063 chr03:030143063 0 W/30143063-30143063 FN3426-S SNP A -> G AC=2;AN=184;BQB=0.982428;DP=3151;DP4=1411,1603,10,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.98175e-05;MQSB=0.0906081;RPB=0.0739658;SGB=89.4385;VDB=0.862559;EFF=INTRON(MODIFIER||||952|LOC_Os03g52540|protein_coding|CODING|LOC_Os03g52540.1|1|1) FN351-S.SNP.3:30149723 chr03:030149723 0 W/30149723-30149723 FN351-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g52560 glycosyl hydrolases, putative, expressed SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1471-S.SNP.3:30150707 chr03:030150707 0 W/30150707-30150707 FN1471-S SNP T -> A AC=1;AN=188;BQB=0.890134;DP=2877;DP4=1801,1042,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.28187e-08;MQSB=0.97555;RPB=0.652028;SGB=31.1628;VDB=0.502856;EFF=INTRON(MODIFIER||||365|LOC_Os03g52560|protein_coding|CODING|LOC_Os03g52560.1|2|1) FN3771-S.SNP.3:30156545 chr03:030156545 0 W/30156545-30156545 FN3771-S SNP C -> T AC=2;AN=190;BQB=0.285891;DP=2269;DP4=1245,944,11,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1502e-05;MQSB=0.976825;RPB=0.84656;SGB=71.8647;VDB=0.500401;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.3:30156907 chr03:030156907 0 W/30156907-30156907 FN2689-S SNP T -> A AC=1;AN=200;BQB=0.94543;DP=4427;DP4=2091,2027,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.1167e-16;MQSB=0.729732;RPB=0.434845;SGB=79.9264;VDB=0.46441;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN-8 Single Base Substitution C-T INTRON Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1014-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1014-S Single Base Substitution C-T INTRON HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1122-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1122-S Single Base Substitution C-T INTRON HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1202-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1202-S Single Base Substitution C-T INTRON HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1317-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1317-S Single Base Substitution C-T INTRON HOMO SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1461-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1461-S Single Base Substitution C-T INTRON HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1561-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN1561-S Single Base Substitution C-T INTRON Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2126-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN2126-S SNP C -> T AC=2;AN=168;BQB=0.235258;DP=4207;DP4=2141,1974,28,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.26984e-25;MQSB=0.998167;RPB=0.500613;SGB=-127.697;VDB=0.0800005;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN2272-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN2272-S SNP C -> T AC=2;AN=190;BQB=0.793475;DP=3951;DP4=1457,2209,28,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.23659e-33;MQSB=0.656678;RPB=0.567467;SGB=249.466;VDB=0.624904;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3057-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3057-S SNP C -> T AC=2;AN=184;BQB=0.719738;DP=2302;DP4=937,1249,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.47256e-13;MQSB=0.832418;RPB=0.983826;SGB=88.5747;VDB=0.0671233;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3387-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3387-S SNP C -> T AC=2;AN=184;BQB=0.749525;DP=2226;DP4=938,1203,8,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.73393e-09;MQSB=0.962288;RPB=0.864905;SGB=75.8731;VDB=0.982021;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3554-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.289855;DP=2417;DP4=1031,1285,15,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91238e-15;MQSB=0.845564;RPB=0.890246;SGB=144.388;VDB=0.316251;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3705-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3705-S SNP C -> T AC=2;AN=190;BQB=0.879464;DP=2406;DP4=1006,1305,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.52438e-10;MQSB=0.942061;RPB=0.837806;SGB=85.5263;VDB=0.543356;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3785-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3785-S SNP C -> T AC=2;AN=190;BQB=0.992142;DP=2300;DP4=939,1272,8,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.44746e-09;MQSB=0.964432;RPB=0.269666;SGB=58.2031;VDB=0.0844446;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN3994-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN3994-S SNP C -> T AC=2;AN=168;BQB=0.98589;DP=2267;DP4=936,1236,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.96801e-11;MQSB=0.630358;RPB=0.997106;SGB=83.1885;VDB=0.307122;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|15|1) FN846-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN846-S Single Base Substitution C-T INTRON HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN910-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN910-S Single Base Substitution C-T INTRON HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 FN957-S Single Base Substitution C-T INTRON HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. W500-4-7-1.SNP.3:30157618 chr03:030157618 0 W/30157618-30157618 W500-4-7-1 Single Base Substitution C-T INTRON HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2652-S.SNP.3:30163390 chr03:030163390 0 W/30163390-30163390 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.890294;DP=4786;DP4=2336,2216,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54364e-13;MQSB=0.892702;RPB=0.848544;SGB=91.1059;VDB=0.868885;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|12|1) FN-142.SNP.3:30163860 chr03:030163860 0 W/30163860-30163860 FN-142 Single Base Substitution G-A INTRON HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3526-S.SNP.3:30168119 chr03:030168119 0 W/30168119-30168119 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.966191;DP=2716;DP4=1380,1278,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04447e-07;MQSB=0.996501;RPB=0.964807;SGB=35.9843;VDB=0.620105;EFF=INTRON(MODIFIER||||609|LOC_Os03g52594|protein_coding|CODING|LOC_Os03g52594.4|7|1) FN1097-S.SNP.3:30170112 chr03:030170112 0 W/30170112-30170112 FN1097-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g52594 CCR4-NOT transcription factor, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1552-S.SNP.3:30174856 chr03:030174856 0 W/30174856-30174856 FN1552-S SNP G -> A AC=2;AN=188;BQB=0.84884;DP=3929;DP4=2056,1808,30,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.49176e-29;MQSB=0.994248;RPB=0.386975;SGB=4.55885;VDB=0.342319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.3:30175355 chr03:030175355 0 W/30175355-30175355 FN3374-S SNP A -> G AC=1;AN=184;BQB=0.995357;DP=3424;DP4=1768,1461,16,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.66568e-17;MQSB=0.971565;RPB=0.895655;SGB=92.0965;VDB=0.388576;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.3:30177623 chr03:030177623 0 W/30177623-30177623 FN3903-S SNP A -> G AC=1;AN=158;BQB=0.996372;DP=1604;DP4=1144,130,7,1;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00124688;MQB=0.12643;MQSB=6.951e-06;RPB=0.877571;SGB=29.5899;VDB=0.0258883;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.3:30178815 chr03:030178815 0 W/30178815-30178815 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN938-S.SNP.3:30185341 chr03:030185341 0 W/30185341-30185341 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1697-S.SNP.3:30192078 chr03:030192078 0 W/30192078-30192078 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.00489426;DP=3451;DP4=2014,1396,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83815e-09;MQSB=0.976674;RPB=0.0559199;SGB=-166.713;VDB=0.262134;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.3:30194412 chr03:030194412 0 W/30194412-30194412 FN369-S Single Base Substitution A-C INTERGENIC HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3840-S.SNP.3:30199994 chr03:030199994 0 W/30199994-30199994 FN3840-S SNP C -> G AC=1;AN=190;BQB=0.982216;DP=3080;DP4=1642,1265,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.96121e-09;MQSB=0.992289;RPB=0.65105;SGB=28.7675;VDB=0.0464498;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtC|V46|247|LOC_Os03g52670|protein_coding|CODING|LOC_Os03g52670.1|1|1) FN1522-S.SNP.3:30201278 chr03:030201278 0 W/30201278-30201278 FN1522-S Single Base Substitution A-G INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN3978-S.SNP.3:30201594 chr03:030201594 0 W/30201594-30201594 FN3978-S SNP C -> A AC=1;AN=168;BQB=0.99495;DP=2935;DP4=1659,1181,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.65382e-09;MQSB=0.728947;RPB=0.69262;SGB=56.6036;VDB=0.373921;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN-345 Single Base Substitution T-C INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN-71 Single Base Substitution T-C INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN2279-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN2279-S SNP T -> C AC=1;AN=190;BQB=0.894944;DP=5097;DP4=2300,2525,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.29163e-17;MQSB=0.985441;RPB=0.699176;SGB=140.173;VDB=0.129598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN2486 SNP T -> C AC=2;AN=200;BQB=0.637732;DP=4902;DP4=2274,2383,25,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.27724e-31;MQSB=0.873094;RPB=0.967448;SGB=243.077;VDB=0.291022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN2546-S SNP T -> C AC=2;AN=198;BQB=0.321366;DP=4162;DP4=1875,2118,12,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.75957e-14;MQSB=0.99997;RPB=0.960459;SGB=100.095;VDB=0.0432472;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN2719-S SNP T -> C AC=2;AN=200;BQB=0.857531;DP=4831;DP4=2258,2397,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.51735e-26;MQSB=0.999615;RPB=0.372839;SGB=102.43;VDB=0.18812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN3345-S SNP T -> C AC=2;AN=184;BQB=0.981434;DP=2769;DP4=1312,1372,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.84071e-17;MQSB=0.908863;RPB=0.901498;SGB=116.569;VDB=0.461112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN3665-S SNP T -> C AC=1;AN=190;BQB=0.997023;DP=2802;DP4=1337,1376,20,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8719e-22;MQSB=0.999443;RPB=0.860149;SGB=167.496;VDB=0.572467;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN4063-S SNP T -> C AC=2;AN=168;BQB=0.656533;DP=2404;DP4=1150,1173,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.75667e-11;MQSB=0.957345;RPB=0.833573;SGB=69.0561;VDB=0.608266;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN509-S Single Base Substitution T-C INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN836-S.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN836-S Single Base Substitution T-C INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN_812-4-1.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 FN_812-4-1 Single Base Substitution T-C Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.3:30215260 chr03:030215260 0 W/30215260-30215260 W453-3-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN3599-S.SNP.3:30216494 chr03:030216494 0 W/30216494-30216494 FN3599-S SNP A -> C AC=1;AN=188;BQB=0.397749;DP=2801;DP4=1343,1386,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.21261e-06;MQSB=0.999998;RPB=0.210454;SGB=32.441;VDB=0.804268;EFF=INTRON(MODIFIER||||915|LOC_Os03g52700|protein_coding|CODING|LOC_Os03g52700.1|9|1) FN3518-S.SNP.3:30222615 chr03:030222615 0 W/30222615-30222615 FN3518-S SNP G -> C AC=1;AN=188;BQB=0.94718;DP=2586;DP4=1170,1335,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.39173e-07;MQSB=0.822191;RPB=0.713263;SGB=25.3545;VDB=0.414348;EFF=INTRON(MODIFIER||||915|LOC_Os03g52700|protein_coding|CODING|LOC_Os03g52700.1|1|1) FN3776-S.SNP.3:30226023 chr03:030226023 0 W/30226023-30226023 FN3776-S SNP A -> C AC=1;AN=190;BQB=0.992428;DP=3309;DP4=1385,1780,2,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.29378e-09;MQSB=0.995924;RPB=0.975229;SGB=39.6545;VDB=0.44694;EFF=SPLICE_SITE_REGION(LOW||||181|LOC_Os03g52720|protein_coding|CODING|LOC_Os03g52720.1|1|1),INTRON(MODIFIER||||181|LOC_Os03g52720|protein_coding|CODING|LOC_Os03g52720.1|1|1) FN1394-S.SNP.3:30231722 chr03:030231722 0 W/30231722-30231722 FN1394-S Single Base Substitution C-A INTRON HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3502-S.SNP.3:30231722 chr03:030231722 0 W/30231722-30231722 FN3502-S SNP C -> A AC=2;AN=188;BQB=0.403311;DP=3297;DP4=1848,1377,13,13;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0609645;MQB=0.832597;MQSB=2.40138e-12;RPB=0.970677;SGB=82.0471;VDB=0.930664;EFF=INTRON(MODIFIER||||623|LOC_Os03g52740|protein_coding|CODING|LOC_Os03g52740.1|5|1) FN724-S.SNP.3:30232721 chr03:030232721 0 W/30232721-30232721 FN724-S Single Base Substitution A-G INTRON HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2655-S.SNP.3:30234122 chr03:030234122 0 W/30234122-30234122 FN2655-S SNP C -> A AC=1;AN=200;BQB=0.948447;DP=4557;DP4=2183,2103,6,9;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0285275;MQB=0.485292;MQSB=0.0567397;RPB=0.78647;SGB=24.2746;VDB=0.551312;EFF=INTRON(MODIFIER||||623|LOC_Os03g52740|protein_coding|CODING|LOC_Os03g52740.1|1|1) FN3708-S.SNP.3:30235723 chr03:030235723 0 W/30235723-30235723 FN3708-S SNP G -> T AC=2;AN=190;BQB=0.99939;DP=2793;DP4=1722,816,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.27172e-08;MQSB=0.434431;RPB=0.735888;SGB=76.4186;VDB=0.349544;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.3:30236539 chr03:030236539 0 W/30236539-30236539 FN1034-S Single Base Substitution A-G SPLICE_SITE_REGION HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN435-S.SNP.3:30238496 chr03:030238496 0 W/30238496-30238496 FN435-S Single Base Substitution C-T INTRON HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN-187.SNP.3:30240543 chr03:030240543 0 W/30240543-30240543 FN-187 Single Base Substitution T-A INTRON HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-328.SNP.3:30249506 chr03:030249506 0 W/30249506-30249506 FN-328 Single Base Substitution T-C INTRON HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3446-S.SNP.3:30259179 chr03:030259179 0 W/30259179-30259179 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.943442;DP=2343;DP4=1097,1180,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42631e-07;MQSB=0.996371;RPB=0.949761;SGB=39.699;VDB=0.560195;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A483T|494|LOC_Os03g52780|protein_coding|CODING|LOC_Os03g52780.1|9|1) FN3446-S.SNP.3:30259183 chr03:030259183 0 W/30259183-30259183 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.909983;DP=2327;DP4=1097,1156,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.56394e-07;MQSB=0.998114;RPB=0.889653;SGB=25.1826;VDB=0.602433;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y481*|494|LOC_Os03g52780|protein_coding|CODING|LOC_Os03g52780.1|9|1) FN3541-S.SNP.3:30261951 chr03:030261951 0 W/30261951-30261951 FN3541-S SNP C -> A AC=1;AN=188;BQB=0.861527;DP=3075;DP4=1410,1549,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.7223e-08;MQSB=0.415827;RPB=0.934663;SGB=53.7007;VDB=0.816459;EFF=INTRON(MODIFIER||||494|LOC_Os03g52780|protein_coding|CODING|LOC_Os03g52780.1|1|1) FN1420-S.SNP.3:30277570 chr03:030277570 0 W/30277570-30277570 FN1420-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN4111-S.SNP.3:30286682 chr03:030286682 0 W/30286682-30286682 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.950161;DP=3132;DP4=1476,1570,22,29;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.0102171;MQB=4.20914e-15;MQSB=0.127145;RPB=0.59809;SGB=219.053;VDB=0.572546;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F1502|1987|LOC_Os03g52810|protein_coding|CODING|LOC_Os03g52810.1|3|1) FN3790-S.SNP.3:30294910 chr03:030294910 0 W/30294910-30294910 FN3790-S SNP G -> A AC=2;AN=190;BQB=0.992048;DP=2349;DP4=1189,1048,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.38749e-17;MQSB=0.980212;RPB=0.93375;SGB=140.173;VDB=0.627621;EFF=INTRON(MODIFIER||||287|LOC_Os03g52830|protein_coding|CODING|LOC_Os03g52830.1|3|1) FN2494.SNP.3:30310636 chr03:030310636 0 W/30310636-30310636 FN2494 SNP A -> C AC=1;AN=200;BQB=0.410842;DP=4910;DP4=2620,2013,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203666;MQB=1.11192e-15;MQSB=0.994447;RPB=0.76445;SGB=79.9264;VDB=0.82924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.3:30312317 chr03:030312317 0 W/30312317-30312317 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.201505;DP=4845;DP4=2153,2417,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.23789e-14;MQSB=0.859966;RPB=0.657215;SGB=-6.57546;VDB=0.997809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.3:30316730 chr03:030316730 0 W/30316730-30316730 FN2211-S SNP T -> A AC=1;AN=190;BQB=0.977256;DP=4798;DP4=2358,1992,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.91665e-10;MQSB=0.422283;RPB=0.478759;SGB=38.983;VDB=0.593899;EFF=INTRON(MODIFIER||||870|LOC_Os03g52860|protein_coding|CODING|LOC_Os03g52860.1|3|1) FN2430.SNP.3:30317335 chr03:030317335 0 W/30317335-30317335 FN2430 SNP A -> G AC=2;AN=200;BQB=0.191288;DP=3713;DP4=1382,1699,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.49246e-17;MQSB=0.46887;RPB=0.0373127;SGB=-44.0018;VDB=0.0821384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T397A|870|LOC_Os03g52860|protein_coding|CODING|LOC_Os03g52860.1|4|1) FN4275-S.SNP.3:30317613 chr03:030317613 0 W/30317613-30317613 FN4275-S SNP G -> A AC=1;AN=170;BQB=0.895441;DP=2681;DP4=1454,1129,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000198742;MQSB=0.657209;RPB=0.340417;SGB=31.4354;VDB=0.281616;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P489|870|LOC_Os03g52860|protein_coding|CODING|LOC_Os03g52860.1|4|1) FN2536-S.SNP.3:30324618 chr03:030324618 0 W/30324618-30324618 FN2536-S SNP A -> C AC=2;AN=198;BQB=0.84355;DP=3925;DP4=1977,1693,9,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.19092e-14;MQSB=0.973273;RPB=0.713839;SGB=72.5051;VDB=0.162234;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.3:30324618 chr03:030324618 0 W/30324618-30324618 FN4117-S SNP A -> C AC=1;AN=182;BQB=0.941428;DP=3048;DP4=1415,1502,2,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.74203e-09;MQSB=0.886705;RPB=0.775852;SGB=20.6332;VDB=0.0714772;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.3:30324618 chr03:030324618 0 W/30324618-30324618 FN664-S Single Base Substitution A-C INTERGENIC HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN1254-S.SNP.3:30329998 chr03:030329998 0 W/30329998-30329998 FN1254-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1156-XA21.SNP.3:30336354 chr03:030336354 0 W/30336354-30336354 FN1156-XA21 Single Base Substitution C-T INTRON Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3455-S.SNP.3:30343874 chr03:030343874 0 W/30343874-30343874 FN3455-S SNP T -> A AC=2;AN=184;BQB=0.352442;DP=3347;DP4=1684,1546,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.78794e-10;MQSB=0.906956;RPB=0.801614;SGB=45.9712;VDB=0.860764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.3:30346717 chr03:030346717 0 W/30346717-30346717 FN2618-S SNP G -> T AC=1;AN=198;BQB=0.999844;DP=4021;DP4=1800,2050,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.57416e-06;MQSB=0.931531;RPB=0.330411;SGB=22.1736;VDB=0.709501;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.3:30347338 chr03:030347338 0 W/30347338-30347338 FN3804-S SNP C -> A AC=1;AN=190;BQB=0.604422;DP=2543;DP4=1182,1258,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52597e-07;MQSB=0.939513;RPB=0.868905;SGB=44.5415;VDB=0.659761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.3:30347681 chr03:030347681 0 W/30347681-30347681 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.749885;DP=4681;DP4=2463,1899,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.72767e-07;MQSB=0.970299;RPB=0.978839;SGB=24.2746;VDB=0.300463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.3:30348554 chr03:030348554 0 W/30348554-30348554 FN2298 SNP A -> G AC=1;AN=192;BQB=0.205353;DP=4358;DP4=2061,2056,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000229463;MQB=3.96632e-10;MQSB=0.747103;RPB=0.0231496;SGB=-11.3826;VDB=0.378509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.3:30351838 chr03:030351838 0 W/30351838-30351838 FN2537-S SNP T -> A AC=1;AN=198;BQB=0.954496;DP=3547;DP4=1631,1777,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.23528e-08;MQSB=0.720493;RPB=0.742896;SGB=67.9293;VDB=0.0112131;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.3:30354024 chr03:030354024 0 W/30354024-30354024 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.995867;DP=2248;DP4=1169,986,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00031756;MQSB=0.000159159;RPB=0.848504;SGB=39.9877;VDB=0.560194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.3:30354147 chr03:030354147 0 W/30354147-30354147 FN4224-S SNP G -> T AC=2;AN=170;BQB=0.667293;DP=1886;DP4=866,947,11,11;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=7.15028e-08;MQSB=9.35875e-16;RPB=0.996937;SGB=92.2986;VDB=0.00679572;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.3:30356878 chr03:030356878 0 W/30356878-30356878 FN_827-1 Single Base Substitution A-G HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2529-S.SNP.3:30358728 chr03:030358728 0 W/30358728-30358728 FN2529-S SNP A -> G AC=1;AN=198;BQB=0.843794;DP=3474;DP4=1560,1683,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00115141;MQB=7.42374e-05;MQSB=0.935398;RPB=0.917421;SGB=13.7737;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.3:30359709 chr03:030359709 0 W/30359709-30359709 FN4229-S SNP T -> A AC=1;AN=170;BQB=0.668076;DP=2596;DP4=1395,1110,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.57189e-08;MQSB=0.998766;RPB=0.997787;SGB=52.0913;VDB=0.871729;EFF=INTRON(MODIFIER||||98|LOC_Os03g52930|protein_coding|CODING|LOC_Os03g52930.1|1|1) FN3664-S.SNP.3:30360194 chr03:030360194 0 W/30360194-30360194 FN3664-S SNP A -> G AC=1;AN=190;BQB=0.999509;DP=3109;DP4=1440,1532,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.66167e-10;MQSB=0.905166;RPB=0.640058;SGB=31.3213;VDB=0.553386;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.3:30360842 chr03:030360842 0 W/30360842-30360842 FN-152 Single Base Substitution G-A INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN3927-S.SNP.3:30366441 chr03:030366441 0 W/30366441-30366441 FN3927-S SNP T -> C AC=1;AN=158;BQB=0.930317;DP=2183;DP4=1034,1071,15,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.17302e-09;MQSB=0.753314;RPB=0.921095;SGB=54.2901;VDB=0.398904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.3:30367871 chr03:030367871 0 W/30367871-30367871 FN2311 SNP G -> A AC=2;AN=192;BQB=0.659052;DP=4852;DP4=2141,2340,16,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000206101;MQB=2.98689e-17;MQSB=0.0923859;RPB=0.956988;SGB=-134.902;VDB=0.566768;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.3:30369136 chr03:030369136 0 W/30369136-30369136 FN832-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g52940 expressed protein SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2485.SNP.3:30371667 chr03:030371667 0 W/30371667-30371667 FN2485 SNP C -> G AC=1;AN=200;BQB=0.972032;DP=4306;DP4=2290,1775,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93668e-07;MQSB=0.563605;RPB=0.916128;SGB=1.46408;VDB=0.358296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.3:30372147 chr03:030372147 0 W/30372147-30372147 FN-164 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g52950 retrotransposon protein, putative, unclassified, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1652-S.SNP.3:30372171 chr03:030372171 0 W/30372171-30372171 FN1652-S Single Base Substitution T-C INTRON Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN-223.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN-223 Single Base Substitution C-G INTERGENIC HOMO SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-306.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN-306 Single Base Substitution C-G INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-85.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN-85 Single Base Substitution C-G INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2447.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN2447 SNP C -> G AC=1;AN=200;BQB=0.73866;DP=3987;DP4=1788,1915,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53632e-11;MQSB=0.852679;RPB=0.171172;SGB=61.9006;VDB=0.5661;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN3577-S SNP C -> G AC=2;AN=188;BQB=0.985472;DP=2208;DP4=1379,754,23,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68923e-15;MQSB=0.961766;RPB=0.337558;SGB=66.7689;VDB=0.456631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.3:30377951 chr03:030377951 0 W/30377951-30377951 FN3899-S SNP C -> G AC=2;AN=158;BQB=0.92056;DP=2052;DP4=1226,737,16,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.73676e-14;MQSB=0.999343;RPB=0.605346;SGB=84.6152;VDB=0.595913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1449-S.SNP.3:30378163 chr03:030378163 0 W/30378163-30378163 FN1449-S Single Base Substitution C-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN1336-S.SNP.3:30389174 chr03:030389174 0 W/30389174-30389174 FN1336-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g52980 CWF19-like 2, cell cycle control, putative, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2529-S.SNP.3:30398839 chr03:030398839 0 W/30398839-30398839 FN2529-S SNP A -> C AC=2;AN=198;BQB=0.951898;DP=4032;DP4=1867,1973,13,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.39062e-11;MQSB=0.997254;RPB=0.894952;SGB=-10.2651;VDB=0.507243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.3:30402498 chr03:030402498 0 W/30402498-30402498 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.9087;DP=3802;DP4=1882,1806,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.39691e-06;MQSB=0.825851;RPB=0.77742;SGB=35.1773;VDB=0.123208;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N88|263|LOC_Os03g53010|protein_coding|CODING|LOC_Os03g53010.1|1|1) FN3879-S.SNP.3:30408311 chr03:030408311 0 W/30408311-30408311 FN3879-S SNP A -> G AC=1;AN=158;BQB=0.816168;DP=1722;DP4=1178,455,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00058072;MQB=3.55851e-06;MQSB=0.99966;RPB=0.869825;SGB=34.0735;VDB=0.843506;EFF=INTRON(MODIFIER||||299|LOC_Os03g53020|protein_coding|CODING|LOC_Os03g53020.1|2|1) FN1186-S.SNP.3:30410874 chr03:030410874 0 W/30410874-30410874 FN1186-S Single Base Substitution C-A INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN548-S.SNP.3:30413631 chr03:030413631 0 W/30413631-30413631 FN548-S Single Base Substitution C-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-191.SNP.3:30415258 chr03:030415258 0 W/30415258-30415258 FN-191 Single Base Substitution G-C INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1496-S.SNP.3:30418321 chr03:030418321 0 W/30418321-30418321 FN1496-S Single Base Substitution G-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1411-S.SNP.3:30423893 chr03:030423893 0 W/30423893-30423893 FN1411-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g53050 WRKY121, expressed SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN-138.SNP.3:30424042 chr03:030424042 0 W/30424042-30424042 FN-138 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN-170.SNP.3:30436313 chr03:030436313 0 W/30436313-30436313 FN-170 Single Base Substitution G-A INTERGENIC HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3990-S.SNP.3:30437419 chr03:030437419 0 W/30437419-30437419 FN3990-S SNP C -> A AC=1;AN=168;BQB=0.981718;DP=2583;DP4=1314,1130,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.38158e-09;MQSB=0.883165;RPB=0.965085;SGB=65.4653;VDB=0.334298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F235L|265|LOC_Os03g53070|protein_coding|CODING|LOC_Os03g53070.1|1|1) FN-251.SNP.3:30442954 chr03:030442954 0 W/30442954-30442954 FN-251 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g53080 zinc finger, C3HC4 type domain containing protein, expressed SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN1186-S.SNP.3:30443987 chr03:030443987 0 W/30443987-30443987 FN1186-S Single Base Substitution A-T INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1186-S.SNP.3:30443988 chr03:030443988 0 W/30443988-30443988 FN1186-S Single Base Substitution C-T INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN916-S.SNP.3:30459625 chr03:030459625 0 W/30459625-30459625 FN916-S Single Base Substitution C-T INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2739-S.SNP.3:30461467 chr03:030461467 0 W/30461467-30461467 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.598145;DP=4819;DP4=2408,2100,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7182e-11;MQSB=0.988702;RPB=0.082487;SGB=37.3004;VDB=0.0831004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.3:30470498 chr03:030470498 0 W/30470498-30470498 FN1224-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g53130 transposon protein, putative, unclassified, expressed SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3796-S.SNP.3:30470840 chr03:030470840 0 W/30470840-30470840 FN3796-S SNP C -> T AC=1;AN=190;BQB=0.954621;DP=3216;DP4=1374,1713,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.017102;MQB=0.0541201;MQSB=5.18788e-33;RPB=0.997935;SGB=90.0802;VDB=0.940963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1021T|1493|LOC_Os03g53130|protein_coding|CODING|LOC_Os03g53130.1|4|1),SPLICE_SITE_REGION(LOW||||1493|LOC_Os03g53130|protein_coding|CODING|LOC_Os03g53130.1|4|1) FN-216.SNP.3:30480940 chr03:030480940 0 W/30480940-30480940 FN-216 Single Base Substitution T-C INTRON HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-293.SNP.3:30482308 chr03:030482308 0 W/30482308-30482308 FN-293 Single Base Substitution A-C INTRON HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN4044-S.SNP.3:30485014 chr03:030485014 0 W/30485014-30485014 FN4044-S SNP C -> G AC=1;AN=168;BQB=0.869983;DP=2611;DP4=1114,1324,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000382995;MQB=1.7343e-05;MQSB=0.942121;RPB=0.909704;SGB=12.4615;VDB=0.11434;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.3:30491155 chr03:030491155 0 W/30491155-30491155 FN584-S Single Base Substitution A-G INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3530-S.SNP.3:30494179 chr03:030494179 0 W/30494179-30494179 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.653007;DP=3385;DP4=1348,1898,7,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.67091e-13;MQSB=0.235927;RPB=0.644553;SGB=85.5904;VDB=0.177368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.3:30508149 chr03:030508149 0 W/30508149-30508149 FN3460-S SNP C -> T AC=1;AN=184;BQB=0.541116;DP=3040;DP4=1353,1377,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00023496;MQSB=0.849184;RPB=0.954568;SGB=25.1826;VDB=0.439806;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.3:30509984 chr03:030509984 0 W/30509984-30509984 FN-409 Single Base Substitution C-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3854-S.SNP.3:30513091 chr03:030513091 0 W/30513091-30513091 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.981275;DP=2829;DP4=1210,1487,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.10322e-11;MQSB=0.861869;RPB=0.235574;SGB=-16.1686;VDB=0.630381;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.3:30514490 chr03:030514490 0 W/30514490-30514490 FN996-S Single Base Substitution A-T INTRON HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN890-S.SNP.3:30520271 chr03:030520271 0 W/30520271-30520271 FN890-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1658-S.SNP.3:30521747 chr03:030521747 0 W/30521747-30521747 FN1658-S SNP T -> A AC=1;AN=188;BQB=0.919542;DP=4356;DP4=2130,2183,12,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.60046e-13;MQSB=0.985895;RPB=0.922042;SGB=-155.916;VDB=0.059514;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-M.SNP.3:30521967 chr03:030521967 0 W/30521967-30521967 FN1554-M SNP G -> T AC=1;AN=190;BQB=0.992122;DP=4673;DP4=2207,2095,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.9413e-08;MQSB=0.98212;RPB=0.772079;SGB=26.2136;VDB=0.831558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.3:30540568 chr03:030540568 0 W/30540568-30540568 FN2331 SNP G -> T AC=1;AN=192;BQB=0.857189;DP=5167;DP4=2549,2303,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.24305e-08;MQSB=0.707524;RPB=0.736997;SGB=4.22611;VDB=0.257957;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.3:30544925 chr03:030544925 0 W/30544925-30544925 FN4109-S SNP C -> T AC=1;AN=182;BQB=0.947983;DP=3179;DP4=1512,1601,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.31416e-05;MQSB=0.952807;RPB=0.970725;SGB=18.0739;VDB=0.394165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.3:30547568 chr03:030547568 0 W/30547568-30547568 FN3411-S SNP G -> A AC=1;AN=184;BQB=0.859368;DP=2845;DP4=1207,1394,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48191e-06;MQSB=0.642378;RPB=0.957471;SGB=39.699;VDB=0.711662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.3:30554146 chr03:030554146 0 W/30554146-30554146 FN1685-S SNP A -> G AC=1;AN=188;BQB=0.815705;DP=4103;DP4=2134,1925,16,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.82449e-15;MQSB=0.788951;RPB=0.582105;SGB=-42.3883;VDB=0.0669687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.3:30556889 chr03:030556889 0 W/30556889-30556889 FN-179 Single Base Substitution C-T INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-304.SNP.3:30559429 chr03:030559429 0 W/30559429-30559429 FN-304 Single Base Substitution G-A INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN2114-S.SNP.3:30564373 chr03:030564373 0 W/30564373-30564373 FN2114-S SNP T -> A AC=1;AN=168;BQB=0.629081;DP=3658;DP4=1843,1783,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.91358e-11;MQSB=0.987392;RPB=0.96299;SGB=78.7577;VDB=0.936777;EFF=UTR_3_PRIME(MODIFIER||809||3582|LOC_Os03g53280|protein_coding|CODING|LOC_Os03g53280.1|20|1) FN-124.SNP.3:30566472 chr03:030566472 0 W/30566472-30566472 FN-124 Single Base Substitution T-C INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN4020-S.SNP.3:30567652 chr03:030567652 0 W/30567652-30567652 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.616952;DP=2554;DP4=1272,1169,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.5749e-06;MQSB=0.966452;RPB=0.735648;SGB=61.0344;VDB=0.663763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P3019S|3582|LOC_Os03g53280|protein_coding|CODING|LOC_Os03g53280.1|17|1) FN2351.SNP.3:30569155 chr03:030569155 0 W/30569155-30569155 FN2351 SNP T -> A AC=1;AN=192;BQB=0.261787;DP=4895;DP4=2438,2137,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.6259e-09;MQSB=0.999031;RPB=0.98259;SGB=12.0478;VDB=0.934743;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E2749V|3582|LOC_Os03g53280|protein_coding|CODING|LOC_Os03g53280.1|16|1) FN2351.SNP.3:30569156 chr03:030569156 0 W/30569156-30569156 FN2351 SNP C -> A AC=1;AN=192;BQB=0.54543;DP=4882;DP4=2409,2200,17,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.38858e-10;MQSB=0.9996;RPB=0.0773073;SGB=-11.3826;VDB=0.805191;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E2749*|3582|LOC_Os03g53280|protein_coding|CODING|LOC_Os03g53280.1|16|1);LOF=(LOC_Os03g53280|LOC_Os03g53280|1|1.00);NMD=(LOC_Os03g53280|LOC_Os03g53280|1|1.00) W426-1-1.SNP.3:30569942 chr03:030569942 0 W/30569942-30569942 W426-1-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g53280 WD domain containing protein, putative, expressed SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3487-S.SNP.3:30573871 chr03:030573871 0 W/30573871-30573871 FN3487-S SNP A -> T AC=1;AN=184;BQB=0.980433;DP=2604;DP4=1168,1323,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.4871e-12;MQSB=0.987692;RPB=0.839623;SGB=12.8895;VDB=0.399368;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctA|L1228|3582|LOC_Os03g53280|protein_coding|CODING|LOC_Os03g53280.1|14|1) FN1113-S.SNP.3:30579571 chr03:030579571 0 W/30579571-30579571 FN1113-S Single Base Substitution C-T INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN-309.SNP.3:30581133 chr03:030581133 0 W/30581133-30581133 FN-309 Single Base Substitution G-A INTRON HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN993-S.SNP.3:30584452 chr03:030584452 0 W/30584452-30584452 FN993-S Single Base Substitution A-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2370.SNP.3:30585934 chr03:030585934 0 W/30585934-30585934 FN2370 SNP A -> C AC=2;AN=192;BQB=0.751273;DP=5192;DP4=2429,2226,25,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.44331e-22;MQSB=0.86419;RPB=0.896217;SGB=103.28;VDB=0.374771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-295.SNP.3:30593583 chr03:030593583 0 W/30593583-30593583 FN-295 Single Base Substitution T-C INTRON HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1673-S.SNP.3:30604640 chr03:030604640 0 W/30604640-30604640 FN1673-S SNP A -> G AC=1;AN=188;BQB=0.0987985;DP=3379;DP4=1491,1857,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000658432;MQSB=0.891986;RPB=0.814946;SGB=-0.634963;VDB=0.919643;EFF=UTR_3_PRIME(MODIFIER||622||376|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.1|4|1),UTR_3_PRIME(MODIFIER||622||376|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.2|3|1),UTR_3_PRIME(MODIFIER||622||376|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.3|2|1),UTR_3_PRIME(MODIFIER||622||288|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.4|2|1),UTR_3_PRIME(MODIFIER||716||224|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.5|2|1),INTRON(MODIFIER||||376|LOC_Os03g53340|protein_coding|CODING|LOC_Os03g53340.6|2|1) W22-2-1.SNP.3:30623440 chr03:030623440 0 W/30623440-30623440 W22-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2784-S.SNP.3:30624822 chr03:030624822 0 W/30624822-30624822 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.962246;DP=4366;DP4=2178,1860,24,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61836e-22;MQSB=0.982491;RPB=0.622788;SGB=46.0372;VDB=0.548899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2115-S.SNP.3:30634703 chr03:030634703 0 W/30634703-30634703 FN2115-S SNP A -> T AC=1;AN=168;BQB=0.00507925;DP=2998;DP4=1821,1081,22,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.38739e-06;MQSB=0.997575;RPB=0.139418;SGB=-335.313;VDB=0.0432619;EFF=INTRON(MODIFIER||||305|LOC_Os03g53390|protein_coding|CODING|LOC_Os03g53390.1|3|1) FN867-S.SNP.3:30644191 chr03:030644191 0 W/30644191-30644191 FN867-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g53410 protein kinase domain containing protein, expressed SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN3354-S.SNP.3:30649260 chr03:030649260 0 W/30649260-30649260 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.756797;DP=2897;DP4=1407,1393,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.5721e-10;MQSB=0.880438;RPB=0.999049;SGB=-15.2358;VDB=0.645693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.3:30649587 chr03:030649587 0 W/30649587-30649587 FN1566-S Single Base Substitution C-T INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN4141-S.SNP.3:30649952 chr03:030649952 0 W/30649952-30649952 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.928482;DP=2496;DP4=1081,1357,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.75093e-11;MQSB=0.999409;RPB=0.229234;SGB=48.6486;VDB=0.459648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.3:30667704 chr03:030667704 0 W/30667704-30667704 FN1274-S Single Base Substitution C-T INTRON HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1369-S.SNP.3:30670263 chr03:030670263 0 W/30670263-30670263 FN1369-S Single Base Substitution G-A INTERGENIC Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN1627-S.SNP.3:30684922 chr03:030684922 0 W/30684922-30684922 FN1627-S Single Base Substitution C-T INTRON HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2588-S.SNP.3:30686678 chr03:030686678 0 W/30686678-30686678 FN2588-S SNP T -> C AC=1;AN=198;BQB=0.975893;DP=4007;DP4=1805,1891,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.79744e-14;MQSB=0.952443;RPB=0.994741;SGB=42.3199;VDB=0.708961;EFF=INTRON(MODIFIER||||579|LOC_Os03g53500|protein_coding|CODING|LOC_Os03g53500.1|5|1) FN3345-S.SNP.3:30693700 chr03:030693700 0 W/30693700-30693700 FN3345-S SNP A -> T AC=2;AN=184;BQB=0.897154;DP=2936;DP4=1639,1096,23,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11501e-18;MQSB=0.996507;RPB=0.601694;SGB=71.1891;VDB=0.0508733;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.3:30694461 chr03:030694461 0 W/30694461-30694461 FN429-S Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1057-S.SNP.3:30697509 chr03:030697509 0 W/30697509-30697509 FN1057-S Single Base Substitution T-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-64.SNP.3:30698055 chr03:030698055 0 W/30698055-30698055 FN-64 Single Base Substitution A-G INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN927-S.SNP.3:30705752 chr03:030705752 0 W/30705752-30705752 FN927-S Single Base Substitution A-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1114-S.SNP.3:30711627 chr03:030711627 0 W/30711627-30711627 FN1114-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2537-S.SNP.3:30718872 chr03:030718872 0 W/30718872-30718872 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.810935;DP=4000;DP4=1704,2083,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.01375;MQB=0.183643;MQSB=0;RPB=0.0795685;SGB=-37.8551;VDB=0.0733722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.3:30719103 chr03:030719103 0 W/30719103-30719103 FN2426 SNP C -> T AC=2;AN=200;BQB=0.737826;DP=4561;DP4=2549,1745,45,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.05816e-42;MQSB=0.523736;RPB=0.946292;SGB=320.372;VDB=0.0284921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.3:30719112 chr03:030719112 0 W/30719112-30719112 FN2426 SNP C -> T AC=2;AN=200;BQB=0.379495;DP=4566;DP4=2561,1695,46,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.21321e-40;MQSB=0.371011;RPB=0.74608;SGB=195.483;VDB=0.0361677;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.3:30722267 chr03:030722267 0 W/30722267-30722267 FN718-S Single Base Substitution C-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN940-S.SNP.3:30725922 chr03:030725922 0 W/30725922-30725922 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-274.SNP.3:30729365 chr03:030729365 0 W/30729365-30729365 FN-274 Single Base Substitution G-A INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4070-S.SNP.3:30730031 chr03:030730031 0 W/30730031-30730031 FN4070-S SNP T -> A AC=1;AN=182;BQB=0.962434;DP=2945;DP4=1401,1454,21,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.0606e-24;MQSB=0.996551;RPB=0.900246;SGB=123.399;VDB=0.1076;EFF=INTRON(MODIFIER||||735|LOC_Os03g53590|protein_coding|CODING|LOC_Os03g53590.1|5|1),INTRON(MODIFIER||||735|LOC_Os03g53590|protein_coding|CODING|LOC_Os03g53590.2|4|1) FN1719-S.SNP.3:30740340 chr03:030740340 0 W/30740340-30740340 FN1719-S SNP G -> A AC=2;AN=188;BQB=0.203536;DP=3763;DP4=1822,1889,20,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65835e-18;MQSB=0.957941;RPB=0.992269;SGB=84.5719;VDB=0.553955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.3:30743265 chr03:030743265 0 W/30743265-30743265 FN2594-S SNP T -> C AC=1;AN=198;BQB=0.98184;DP=3520;DP4=1909,1407,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000162034;MQSB=0.760275;RPB=0.695883;SGB=11.1786;VDB=0.672104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E202G|214|LOC_Os03g53620|protein_coding|CODING|LOC_Os03g53620.1|2|1) FN3522-S.SNP.3:30747087 chr03:030747087 0 W/30747087-30747087 FN3522-S SNP T -> C AC=1;AN=188;BQB=0.99995;DP=3308;DP4=1342,1714,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.34573e-13;MQSB=0.951367;RPB=0.447672;SGB=43.8792;VDB=0.603822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.3:30753851 chr03:030753851 0 W/30753851-30753851 FN2348 SNP C -> A AC=2;AN=192;BQB=0.944823;DP=4980;DP4=2425,2271,19,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.97614e-19;MQSB=0.47756;RPB=0.983723;SGB=95.587;VDB=0.739625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L1219M|1345|LOC_Os03g53630|protein_coding|CODING|LOC_Os03g53630.1|7|1) FN1707-S.SNP.3:30759476 chr03:030759476 0 W/30759476-30759476 FN1707-S SNP T -> G AC=1;AN=188;BQB=0.0734272;DP=2981;DP4=1741,1197,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87558e-05;MQSB=0.963246;RPB=0.811528;SGB=-13.9132;VDB=0.835744;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.3:30767250 chr03:030767250 0 W/30767250-30767250 FN723-S Single Base Substitution C-T INTRON HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1704-S.SNP.3:30768804 chr03:030768804 0 W/30768804-30768804 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.890292;DP=3999;DP4=2014,1925,20,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.60834e-19;MQSB=0.887491;RPB=0.813331;SGB=131.653;VDB=0.638229;EFF=INTRON(MODIFIER||||1498|LOC_Os03g53660|protein_coding|CODING|LOC_Os03g53660.1|17|1) FN939-S.SNP.3:30769790 chr03:030769790 0 W/30769790-30769790 FN939-S Single Base Substitution G-T INTRON HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN939-S.SNP.3:30769792 chr03:030769792 0 W/30769792-30769792 FN939-S Single Base Substitution C-A INTRON HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN939-S.SNP.3:30769794 chr03:030769794 0 W/30769794-30769794 FN939-S Single Base Substitution A-T INTRON HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN-366.SNP.3:30774315 chr03:030774315 0 W/30774315-30774315 FN-366 Single Base Substitution A-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3822-S.SNP.3:30778885 chr03:030778885 0 W/30778885-30778885 FN3822-S SNP T -> A AC=1;AN=190;BQB=0.907575;DP=2837;DP4=1275,1440,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.72774e-08;MQSB=0.980137;RPB=0.155195;SGB=26.2136;VDB=0.221297;EFF=INTRON(MODIFIER||||662|LOC_Os03g53670|protein_coding|CODING|LOC_Os03g53670.2|4|1),INTRON(MODIFIER||||661|LOC_Os03g53670|protein_coding|CODING|LOC_Os03g53670.1|4|1) FN1704-S.SNP.3:30779147 chr03:030779147 0 W/30779147-30779147 FN1704-S SNP T -> G AC=2;AN=188;BQB=0.730346;DP=3178;DP4=1633,1500,17,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.7099e-18;MQSB=0.996236;RPB=0.583411;SGB=61.6823;VDB=0.36113;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A171|662|LOC_Os03g53670|protein_coding|CODING|LOC_Os03g53670.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A170|661|LOC_Os03g53670|protein_coding|CODING|LOC_Os03g53670.1|5|1) FN743-S.SNP.3:30780825 chr03:030780825 0 W/30780825-30780825 FN743-S Single Base Substitution A-G INTRON HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN3709-S.SNP.3:30782526 chr03:030782526 0 W/30782526-30782526 FN3709-S SNP G -> A AC=2;AN=190;BQB=0.898077;DP=2799;DP4=1265,1416,6,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.57076e-07;MQSB=0.999688;RPB=0.464795;SGB=62.7569;VDB=0.0176795;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.3:30790531 chr03:030790531 0 W/30790531-30790531 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN1523-S.SNP.3:30791890 chr03:030791890 0 W/30791890-30791890 FN1523-S Single Base Substitution C-T INTRON HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN-223.SNP.3:30793571 chr03:030793571 0 W/30793571-30793571 FN-223 Single Base Substitution C-T INTRON HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN493-S.SNP.3:30801981 chr03:030801981 0 W/30801981-30801981 FN493-S Single Base Substitution T-C INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN523-S.SNP.3:30803216 chr03:030803216 0 W/30803216-30803216 FN523-S Single Base Substitution A-T INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.3:30803216 chr03:030803216 0 W/30803216-30803216 FN532-S Single Base Substitution A-T INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN_543-2-6.SNP.3:30803458 chr03:030803458 0 W/30803458-30803458 FN_543-2-6 Single Base Substitution C-A Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2482.SNP.3:30805439 chr03:030805439 0 W/30805439-30805439 FN2482 SNP G -> A AC=2;AN=200;BQB=0.923814;DP=5343;DP4=2593,2423,21,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.76837e-17;MQSB=0.997813;RPB=0.308609;SGB=150.973;VDB=0.615609;EFF=UTR_3_PRIME(MODIFIER||398||409|LOC_Os03g53720|protein_coding|CODING|LOC_Os03g53720.2|2|1),INTRON(MODIFIER||||556|LOC_Os03g53720|protein_coding|CODING|LOC_Os03g53720.1|2|1) FN-206.SNP.3:30805725 chr03:030805725 0 W/30805725-30805725 FN-206 Single Base Substitution T-C INTRON HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2541-S.SNP.3:30807356 chr03:030807356 0 W/30807356-30807356 FN2541-S SNP A -> C AC=2;AN=198;BQB=0.783904;DP=4120;DP4=1887,1941,26,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.27706e-22;MQSB=0.894011;RPB=0.88786;SGB=144.408;VDB=0.87927;EFF=UTR_3_PRIME(MODIFIER||2315||409|LOC_Os03g53720|protein_coding|CODING|LOC_Os03g53720.2|3|1),UTR_3_PRIME(MODIFIER||244||556|LOC_Os03g53720|protein_coding|CODING|LOC_Os03g53720.1|4|1) FN3948-S.SNP.3:30810205 chr03:030810205 0 W/30810205-30810205 FN3948-S SNP A -> T AC=1;AN=168;BQB=0.919934;DP=2678;DP4=1239,1256,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.23591e-11;MQSB=0.999734;RPB=0.984596;SGB=92.0501;VDB=0.554329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.3:30811549 chr03:030811549 0 W/30811549-30811549 FN2677-S SNP C -> T AC=1;AN=200;BQB=0.750335;DP=5032;DP4=2515,2196,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83745e-12;MQSB=0.939207;RPB=0.458803;SGB=34.6953;VDB=0.375539;EFF=INTRON(MODIFIER||||476|LOC_Os03g53750|protein_coding|CODING|LOC_Os03g53750.1|8|1),INTRON(MODIFIER||||394|LOC_Os03g53750|protein_coding|CODING|LOC_Os03g53750.2|8|1) FN1376-S.SNP.3:30823012 chr03:030823012 0 W/30823012-30823012 FN1376-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN3355-S.SNP.3:30824079 chr03:030824079 0 W/30824079-30824079 FN3355-S SNP T -> C AC=1;AN=184;BQB=0.971142;DP=3440;DP4=1645,1672,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06999e-06;MQSB=0.811457;RPB=0.970165;SGB=25.1826;VDB=0.560195;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.3:30829416 chr03:030829416 0 W/30829416-30829416 FN4071-S SNP T -> A AC=1;AN=182;BQB=0.991561;DP=2749;DP4=1244,1443,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12455e-06;MQSB=0.999989;RPB=0.999367;SGB=39.6007;VDB=0.762398;EFF=INTERGENIC(MODIFIER||||||||||1) FN-393.SNP.3:30836646 chr03:030836646 0 W/30836646-30836646 FN-393 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g53790 periplasmic beta-glucosidase precursor, putative, expressed SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3294-S.SNP.3:30840422 chr03:030840422 0 W/30840422-30840422 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.997242;DP=3578;DP4=1393,2025,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.47051e-08;MQSB=0.724508;RPB=0.555089;SGB=39.2697;VDB=0.924453;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 FN_N1-169-1 Single Base Substitution T-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-2.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-2 Single Base Substitution T-A INTERGENIC Homo SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-3 Single Base Substitution T-A INTERGENIC Homo SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-4 Single Base Substitution T-A INTERGENIC Homo SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-5 Single Base Substitution T-A INTERGENIC Homo SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-6 Single Base Substitution T-A INTERGENIC Homo SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-7 Single Base Substitution T-A INTERGENIC Homo SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-8 Single Base Substitution T-A INTERGENIC Homo SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.3:30842059 chr03:030842059 0 W/30842059-30842059 N1-169-9 Single Base Substitution T-A INTERGENIC Homo SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN1548-S.SNP.3:30842275 chr03:030842275 0 W/30842275-30842275 FN1548-S SNP G -> A AC=1;AN=188;BQB=0.00323662;DP=4402;DP4=2163,2199,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.39221e-08;MQSB=0.973091;RPB=0.0392952;SGB=-261.327;VDB=0.661431;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.3:30848836 chr03:030848836 0 W/30848836-30848836 FN-187 Single Base Substitution G-C INTERGENIC HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN633-S.SNP.3:30849820 chr03:030849820 0 W/30849820-30849820 FN633-S Single Base Substitution C-T INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN445-S.SNP.3:30850366 chr03:030850366 0 W/30850366-30850366 FN445-S Single Base Substitution A-G INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1759-S.SNP.3:30863151 chr03:030863151 0 W/30863151-30863151 FN1759-S SNP A -> G AC=2;AN=188;BQB=0.975358;DP=1556;DP4=859,659,9,8;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0565553;MQB=0.0160683;MQSB=0.000139314;RPB=0.0546617;SGB=7.0815;VDB=0.0845138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I845V|2012|LOC_Os03g53810|protein_coding|CODING|LOC_Os03g53810.1|2|1) FN2197-S.SNP.3:30866325 chr03:030866325 0 W/30866325-30866325 FN2197-S SNP G -> A AC=1;AN=190;BQB=0.692925;DP=4423;DP4=1833,2232,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.205517;MQB=0.28391;MQSB=0;RPB=0.467531;SGB=64.5316;VDB=0.58312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1886K|2012|LOC_Os03g53810|protein_coding|CODING|LOC_Os03g53810.1|3|1) FN2740-S.SNP.3:30873355 chr03:030873355 0 W/30873355-30873355 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.329853;DP=4732;DP4=2110,2339,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55853e-13;MQSB=0.830535;RPB=0.9256;SGB=50.3263;VDB=0.280505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.3:30878714 chr03:030878714 0 W/30878714-30878714 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.631309;DP=3282;DP4=1790,1337,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38368e-10;MQSB=0.139751;RPB=0.28122;SGB=72.5245;VDB=0.266654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.3:30879209 chr03:030879209 0 W/30879209-30879209 FN2177-S SNP T -> G AC=1;AN=168;BQB=0.0856224;DP=2610;DP4=1431,1134,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00420585;MQSB=0.54572;RPB=0.985343;SGB=-35.5206;VDB=0.413893;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.3:30893136 chr03:030893136 0 W/30893136-30893136 FN453-S Single Base Substitution A-G INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1619-S.SNP.3:30903703 chr03:030903703 0 W/30903703-30903703 FN1619-S Single Base Substitution G-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1076-S.SNP.3:30904379 chr03:030904379 0 W/30904379-30904379 FN1076-S Single Base Substitution G-A INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN1076-S.SNP.3:30904725 chr03:030904725 0 W/30904725-30904725 FN1076-S Single Base Substitution A-T INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3710-S.SNP.3:30904914 chr03:030904914 0 W/30904914-30904914 FN3710-S SNP G -> C AC=1;AN=190;BQB=0.754866;DP=2823;DP4=1312,1438,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.40935e-09;MQSB=0.964828;RPB=0.900398;SGB=43.2083;VDB=0.474291;EFF=INTRON(MODIFIER||||374|LOC_Os03g53910|protein_coding|CODING|LOC_Os03g53910.1|5|1) FN-183.SNP.3:30906612 chr03:030906612 0 W/30906612-30906612 FN-183 Single Base Substitution A-G INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN690-S.SNP.3:30907324 chr03:030907324 0 W/30907324-30907324 FN690-S Single Base Substitution T-C INTERGENIC HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN4201-S.SNP.3:30907423 chr03:030907423 0 W/30907423-30907423 FN4201-S SNP C -> T AC=2;AN=170;BQB=0.533284;DP=2638;DP4=1223,1293,18,29;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.76805e-24;MQSB=0.881231;RPB=0.986942;SGB=142.143;VDB=0.824199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.3:30909364 chr03:030909364 0 W/30909364-30909364 FN3713-S SNP T -> C AC=1;AN=190;BQB=0.988683;DP=3033;DP4=1413,1431,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.33999e-10;MQSB=0.495866;RPB=0.696942;SGB=60.9777;VDB=0.361996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.3:30909504 chr03:030909504 0 W/30909504-30909504 FN1136-19-S Single Base Substitution C-T INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3391-S.SNP.3:30912085 chr03:030912085 0 W/30912085-30912085 FN3391-S SNP C -> T AC=2;AN=184;BQB=0.97371;DP=2608;DP4=1311,1196,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.4428e-14;MQSB=0.956547;RPB=0.407553;SGB=70.9657;VDB=0.739499;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V161|1226|LOC_Os03g53920|protein_coding|CODING|LOC_Os03g53920.1|5|1) FN2795-S.SNP.3:30920396 chr03:030920396 0 W/30920396-30920396 FN2795-S SNP T -> A AC=1;AN=198;BQB=0.999746;DP=4112;DP4=1970,1920,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.36547e-10;MQSB=0.984222;RPB=0.782292;SGB=47.3393;VDB=0.731075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.3:30921528 chr03:030921528 0 W/30921528-30921528 FN2292 SNP C -> A AC=2;AN=192;BQB=0.219588;DP=4259;DP4=1953,1951,15,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.56587e-21;MQSB=0.937665;RPB=0.670739;SGB=168.097;VDB=0.45264;EFF=UTR_3_PRIME(MODIFIER||32||167|LOC_Os03g53930|protein_coding|CODING|LOC_Os03g53930.1|1|1) FN3058-S.SNP.3:30921528 chr03:030921528 0 W/30921528-30921528 FN3058-S SNP C -> A AC=1;AN=184;BQB=0.944703;DP=2992;DP4=1537,1360,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000334225;MQB=2.39127e-08;MQSB=0.00906654;RPB=0.321186;SGB=62.3078;VDB=0.681862;EFF=UTR_3_PRIME(MODIFIER||32||167|LOC_Os03g53930|protein_coding|CODING|LOC_Os03g53930.1|1|1) FN4103-S.SNP.3:30929718 chr03:030929718 0 W/30929718-30929718 FN4103-S SNP T -> C AC=2;AN=182;BQB=0.978002;DP=2744;DP4=1204,1416,5,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.60545e-10;MQSB=0.99192;RPB=0.999991;SGB=71.1765;VDB=0.162533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q3R|480|LOC_Os03g53950|protein_coding|CODING|LOC_Os03g53950.1|1|1) FN2234-S.SNP.3:30933105 chr03:030933105 0 W/30933105-30933105 FN2234-S SNP A -> T AC=1;AN=190;BQB=0.891327;DP=4324;DP4=1779,2188,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23347e-07;MQSB=0.73718;RPB=0.830473;SGB=28.7675;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.3:30933106 chr03:030933106 0 W/30933106-30933106 FN2234-S SNP G -> T AC=1;AN=190;BQB=0.417762;DP=4321;DP4=1825,2223,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27064e-08;MQSB=0.881719;RPB=0.41115;SGB=62.7569;VDB=0.180782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.3:30933479 chr03:030933479 0 W/30933479-30933479 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2724-S.SNP.3:30934365 chr03:030934365 0 W/30934365-30934365 FN2724-S SNP A -> C AC=1;AN=200;BQB=0.90993;DP=4787;DP4=2314,2275,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23345e-14;MQSB=0.999996;RPB=0.559632;SGB=109.527;VDB=0.0344992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.3:30938442 chr03:030938442 0 W/30938442-30938442 FN1506-S Single Base Substitution T-C INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN708-S.SNP.3:30939108 chr03:030939108 0 W/30939108-30939108 FN708-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2301.SNP.3:30941171 chr03:030941171 0 W/30941171-30941171 FN2301 SNP A -> G AC=1;AN=192;BQB=0.959549;DP=4670;DP4=2182,2131,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.83637e-10;MQSB=0.998562;RPB=0.260005;SGB=26.3496;VDB=0.668172;EFF=INTRON(MODIFIER||||567|LOC_Os03g53960|protein_coding|CODING|LOC_Os03g53960.2|5|1),INTRON(MODIFIER||||570|LOC_Os03g53960|protein_coding|CODING|LOC_Os03g53960.1|5|1) FN3835-S.SNP.3:30956820 chr03:030956820 0 W/30956820-30956820 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.975096;DP=2676;DP4=1385,1218,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73849e-07;MQSB=0.907004;RPB=0.985529;SGB=44.5415;VDB=0.837709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R626K|1239|LOC_Os03g53990|protein_coding|CODING|LOC_Os03g53990.1|3|1) FN1333-S.SNP.3:30960063 chr03:030960063 0 W/30960063-30960063 FN1333-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2338.SNP.3:30964394 chr03:030964394 0 W/30964394-30964394 FN2338 SNP C -> T AC=1;AN=192;BQB=0.322482;DP=4485;DP4=2215,2025,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.10123e-06;MQSB=0.783988;RPB=0.872525;SGB=-17.5904;VDB=0.653865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.3:30966192 chr03:030966192 0 W/30966192-30966192 FN1261-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN4083-S.SNP.3:30967585 chr03:030967585 0 W/30967585-30967585 FN4083-S SNP T -> C AC=2;AN=182;BQB=0.999918;DP=1484;DP4=1355,72,14,1;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000673854;MQB=6.29025e-06;MQSB=0.0321703;RPB=0.964072;SGB=62.1548;VDB=0.321554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T980A|997|LOC_Os03g54020|protein_coding|CODING|LOC_Os03g54020.1|11|1) FN3322-S.SNP.3:30968986 chr03:030968986 0 W/30968986-30968986 FN3322-S SNP T -> G AC=1;AN=184;BQB=0.964356;DP=3408;DP4=1758,1565,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00205399;MQB=3.86307e-05;MQSB=0.221353;RPB=0.860465;SGB=18.1394;VDB=0.635344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E711A|997|LOC_Os03g54020|protein_coding|CODING|LOC_Os03g54020.1|6|1) FN2725-S.SNP.3:30974030 chr03:030974030 0 W/30974030-30974030 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.850245;DP=4930;DP4=2242,2414,5,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0385396;MQB=0.0179313;MQSB=7.72617e-09;RPB=0.47039;SGB=26.8797;VDB=0.77123;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G925|1090|LOC_Os03g54030|protein_coding|CODING|LOC_Os03g54030.1|5|1) FN2420.SNP.3:30975361 chr03:030975361 0 W/30975361-30975361 FN2420 SNP T -> G AC=2;AN=200;BQB=0.675851;DP=4713;DP4=2419,2022,25,17;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.022491;MQB=1.04576e-12;MQSB=3.47673e-06;RPB=0.999166;SGB=94.6142;VDB=0.308055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K526Q|1090|LOC_Os03g54030|protein_coding|CODING|LOC_Os03g54030.1|4|1) FN2621-S.SNP.3:30975900 chr03:030975900 0 W/30975900-30975900 FN2621-S SNP C -> A AC=1;AN=200;BQB=0.999614;DP=5709;DP4=2321,3065,31,27;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0973901;MQB=0.216233;MQSB=0;RPB=0.637387;SGB=73.6967;VDB=0.961677;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R346I|1090|LOC_Os03g54030|protein_coding|CODING|LOC_Os03g54030.1|4|1) FN2355.SNP.3:30977451 chr03:030977451 0 W/30977451-30977451 FN2355 SNP G -> A AC=1;AN=192;BQB=0.681133;DP=4738;DP4=2214,2275,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00633179;MQB=0.000106992;MQSB=0.0277765;RPB=0.958339;SGB=29.087;VDB=0.753144;EFF=INTRON(MODIFIER||||1090|LOC_Os03g54030|protein_coding|CODING|LOC_Os03g54030.1|1|1) FN3105-S.SNP.3:30979550 chr03:030979550 0 W/30979550-30979550 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.995265;DP=2863;DP4=1427,1327,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27139e-07;MQSB=0.998079;RPB=0.694159;SGB=53.2642;VDB=0.66923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3481-S.SNP.3:30979550 chr03:030979550 0 W/30979550-30979550 FN3481-S SNP G -> A AC=2;AN=184;BQB=0.986303;DP=2653;DP4=1321,1220,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.3176e-12;MQSB=0.93974;RPB=0.867039;SGB=98.4821;VDB=0.936167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.3:30979550 chr03:030979550 0 W/30979550-30979550 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.999992;DP=2476;DP4=1222,1140,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14621e-07;MQSB=0.855955;RPB=0.937829;SGB=19.7539;VDB=0.0940224;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.3:30979550 chr03:030979550 0 W/30979550-30979550 FN4240-S SNP G -> A AC=2;AN=170;BQB=0.594302;DP=2350;DP4=1178,1080,10,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.58846e-10;MQSB=0.99777;RPB=0.514133;SGB=69.3045;VDB=0.742821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.3:30988422 chr03:030988422 0 W/30988422-30988422 FN3468-S SNP T -> C AC=1;AN=184;BQB=0.996764;DP=3198;DP4=1474,1559,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.18966e-14;MQSB=0.954758;RPB=0.843616;SGB=48.493;VDB=0.12836;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.3:30990054 chr03:030990054 0 W/30990054-30990054 FN543-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2196-S.SNP.3:30994779 chr03:030994779 0 W/30994779-30994779 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.361752;DP=3052;DP4=1287,1274,20,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.73663e-08;MQSB=0.00215391;RPB=0.610133;SGB=-71.8882;VDB=0.9783;EFF=UTR_3_PRIME(MODIFIER||1152||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.1|2|1),INTRON(MODIFIER||||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.2|2|1),INTRON(MODIFIER||||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.3|2|1) FN3522-S.SNP.3:30995256 chr03:030995256 0 W/30995256-30995256 FN3522-S SNP A -> C AC=1;AN=188;BQB=0.998219;DP=2206;DP4=1167,962,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.23062e-08;MQSB=0.767552;RPB=0.0453034;SGB=32.441;VDB=0.779167;EFF=UTR_3_PRIME(MODIFIER||675||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.1|2|1),INTRON(MODIFIER||||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.2|2|1),INTRON(MODIFIER||||52|LOC_Os03g54063|protein_coding|CODING|LOC_Os03g54063.3|2|1) FN1514-S.SNP.3:30997574 chr03:030997574 0 W/30997574-30997574 FN1514-S Single Base Substitution G-A INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1338-S.SNP.3:31008655 chr03:031008655 0 W/31008655-31008655 FN1338-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g54084 phytochrome C, putative, expressed SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1513-S.SNP.3:31014688 chr03:031014688 0 W/31014688-31014688 FN1513-S Single Base Substitution A-G INTERGENIC Homo SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN-311.SNP.3:31027072 chr03:031027072 0 W/31027072-31027072 FN-311 Single Base Substitution A-T INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3563-S.SNP.3:31027072 chr03:031027072 0 W/31027072-31027072 FN3563-S SNP A -> T AC=1;AN=188;BQB=0.853474;DP=3470;DP4=1777,1586,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.3136e-13;MQSB=0.875177;RPB=0.926205;SGB=108.042;VDB=0.157727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.3:31027138 chr03:031027138 0 W/31027138-31027138 FN2399 SNP C -> T AC=1;AN=200;BQB=0.0887531;DP=4548;DP4=2280,1862,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65898e-08;MQSB=0.928718;RPB=0.122627;SGB=-120.485;VDB=0.123319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.3:31033018 chr03:031033018 0 W/31033018-31033018 FN2214-S SNP G -> A AC=1;AN=190;BQB=0.145977;DP=4823;DP4=2210,2276,9,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16331e-13;MQSB=0.790788;RPB=0.745357;SGB=22.7576;VDB=0.255805;EFF=INTRON(MODIFIER||||253|LOC_Os03g54160|protein_coding|CODING|LOC_Os03g54160.1|5|1),INTRON(MODIFIER||||246|LOC_Os03g54160|protein_coding|CODING|LOC_Os03g54160.2|5|1) FN2387.SNP.3:31041229 chr03:031041229 0 W/31041229-31041229 FN2387 SNP G -> A AC=1;AN=192;BQB=0.282104;DP=4079;DP4=1720,1851,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000245158;MQB=3.66964e-07;MQSB=2.86826e-07;RPB=0.437491;SGB=39.1713;VDB=0.94363;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I11|253|LOC_Os03g54160|protein_coding|CODING|LOC_Os03g54160.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I11|246|LOC_Os03g54160|protein_coding|CODING|LOC_Os03g54160.2|1|1) FN-410.SNP.3:31042712 chr03:031042712 0 W/31042712-31042712 FN-410 Single Base Substitution G-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.3:31042712 chr03:031042712 0 W/31042712-31042712 FN410-S Single Base Substitution G-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2217-S.SNP.3:31044365 chr03:031044365 0 W/31044365-31044365 FN2217-S SNP A -> G AC=1;AN=190;BQB=0.655403;DP=4929;DP4=2415,2011,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000405762;MQB=3.07947e-05;MQSB=0.132955;RPB=0.932632;SGB=21.1058;VDB=0.347979;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.3:31045822 chr03:031045822 0 W/31045822-31045822 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. W453-3-1.SNP.3:31046113 chr03:031046113 0 W/31046113-31046113 W453-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN-305.SNP.3:31047456 chr03:031047456 0 W/31047456-31047456 FN-305 Single Base Substitution G-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-112.SNP.3:31060302 chr03:031060302 0 W/31060302-31060302 FN-112 Single Base Substitution A-G INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN731-S.SNP.3:31067921 chr03:031067921 0 W/31067921-31067921 FN731-S Single Base Substitution T-A INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN555-S.SNP.3:31073652 chr03:031073652 0 W/31073652-31073652 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3517-S.SNP.3:31074403 chr03:031074403 0 W/31074403-31074403 FN3517-S SNP G -> A AC=2;AN=188;BQB=0.963523;DP=2826;DP4=1183,1480,11,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.10518e-15;MQSB=0.930378;RPB=0.342908;SGB=112.585;VDB=0.0498567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.3:31076350 chr03:031076350 0 W/31076350-31076350 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.835799;DP=4360;DP4=2205,1879,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.64148e-10;MQSB=0.99829;RPB=0.828162;SGB=37.1297;VDB=0.777048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.3:31077149 chr03:031077149 0 W/31077149-31077149 FN-288 Single Base Substitution C-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN778-S.SNP.3:31077730 chr03:031077730 0 W/31077730-31077730 FN778-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN778-S.SNP.3:31077731 chr03:031077731 0 W/31077731-31077731 FN778-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN778-S.SNP.3:31077732 chr03:031077732 0 W/31077732-31077732 FN778-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1222-S.SNP.3:31080693 chr03:031080693 0 W/31080693-31080693 FN1222-S Single Base Substitution G-T INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1116-S.SNP.3:31090426 chr03:031090426 0 W/31090426-31090426 FN1116-S Single Base Substitution C-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN831-S.SNP.3:31093881 chr03:031093881 0 W/31093881-31093881 FN831-S Single Base Substitution G-A INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2540-S.SNP.3:31095530 chr03:031095530 0 W/31095530-31095530 FN2540-S SNP T -> A AC=1;AN=198;BQB=0.990692;DP=4598;DP4=2041,2297,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000217486;MQB=1.82486e-08;MQSB=0.892639;RPB=0.939884;SGB=63.3342;VDB=0.855535;EFF=INTRON(MODIFIER||||108|LOC_Os03g54240|protein_coding|CODING|LOC_Os03g54240.1|1|1) FN1525-S.SNP.3:31102186 chr03:031102186 0 W/31102186-31102186 FN1525-S Single Base Substitution C-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1118-S.SNP.3:31106056 chr03:031106056 0 W/31106056-31106056 FN1118-S Single Base Substitution T-A INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2331.SNP.3:31114956 chr03:031114956 0 W/31114956-31114956 FN2331 SNP C -> T AC=1;AN=192;BQB=0.181212;DP=4998;DP4=2567,2089,18,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.60844e-16;MQSB=0.348693;RPB=0.859693;SGB=-125.159;VDB=0.753716;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.3:31115263 chr03:031115263 0 W/31115263-31115263 FN518-S Single Base Substitution T-A INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN3848-S.SNP.3:31115325 chr03:031115325 0 W/31115325-31115325 FN3848-S SNP T -> C AC=2;AN=158;BQB=0.841076;DP=2350;DP4=1060,1163,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.04296e-14;MQSB=0.815313;RPB=0.996373;SGB=99.5005;VDB=0.89019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.3:31119739 chr03:031119739 0 W/31119739-31119739 FN2370 SNP G -> A AC=2;AN=192;BQB=0.992306;DP=4702;DP4=2425,2037,25,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.79248e-25;MQSB=0.570042;RPB=0.96315;SGB=-0.0956204;VDB=0.356448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.3:31119740 chr03:031119740 0 W/31119740-31119740 FN2370 SNP G -> T AC=2;AN=192;BQB=0.854304;DP=4680;DP4=2394,2040,24,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.68362e-25;MQSB=0.414774;RPB=0.994017;SGB=43.3348;VDB=0.442931;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.3:31127660 chr03:031127660 0 W/31127660-31127660 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.98895;DP=2648;DP4=1372,1200,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.9459e-09;MQSB=0.998498;RPB=0.326474;SGB=43.0708;VDB=0.61005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.3:31127669 chr03:031127669 0 W/31127669-31127669 FN3594-S SNP G -> C AC=1;AN=188;BQB=0.817324;DP=2625;DP4=1383,1174,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.63623e-10;MQSB=0.957265;RPB=0.239633;SGB=62.6088;VDB=0.949089;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.3:31129205 chr03:031129205 0 W/31129205-31129205 W360-2S-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3783-S.SNP.3:31132503 chr03:031132503 0 W/31132503-31132503 FN3783-S SNP T -> C AC=1;AN=190;BQB=0.779308;DP=2770;DP4=1210,1495,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.77726e-07;MQSB=0.892524;RPB=0.980991;SGB=58.2031;VDB=0.293143;EFF=INTRON(MODIFIER||||321|LOC_Os03g54760|protein_coding|CODING|LOC_Os03g54760.1|4|1) FN2649-S.SNP.3:31140188 chr03:031140188 0 W/31140188-31140188 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.961067;DP=4114;DP4=1918,1840,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90037e-16;MQSB=0.858172;RPB=0.863055;SGB=123.342;VDB=0.266622;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D30|839|LOC_Os03g54780|protein_coding|CODING|LOC_Os03g54780.1|1|1) FN2649-S.SNP.3:31140189 chr03:031140189 0 W/31140189-31140189 FN2649-S SNP G -> T AC=1;AN=200;BQB=0.18032;DP=4099;DP4=1845,1860,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.01184e-19;MQSB=0.925282;RPB=0.774728;SGB=141.763;VDB=0.465679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D31Y|839|LOC_Os03g54780|protein_coding|CODING|LOC_Os03g54780.1|1|1) FN2749-S.SNP.3:31164605 chr03:031164605 0 W/31164605-31164605 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.468771;DP=4664;DP4=2403,1923,3,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0649657;MQB=0.225956;MQSB=0.000596199;RPB=0.829854;SGB=31.2392;VDB=0.195133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.3:31165513 chr03:031165513 0 W/31165513-31165513 FN2166-S SNP T -> A AC=1;AN=168;BQB=0.039649;DP=2243;DP4=739,1469,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.20128e-07;MQSB=0.999847;RPB=0.99212;SGB=1.32907;VDB=0.359944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.3:31180705 chr03:031180705 0 W/31180705-31180705 FN3342-S SNP G -> A AC=1;AN=184;BQB=0.964283;DP=3026;DP4=1421,1452,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0115664;MQB=1.71204e-09;MQSB=0.977658;RPB=0.998255;SGB=35.884;VDB=0.360831;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P111S|132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|4|1) FN2141-S.SNP.3:31180971 chr03:031180971 0 W/31180971-31180971 FN2141-S SNP G -> C AC=1;AN=168;BQB=0.559859;DP=3769;DP4=1617,2103,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0204298;MQB=0.0118918;MQSB=1.65151e-17;RPB=0.925312;SGB=-100.631;VDB=0.593057;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN3762-S.SNP.3:31182011 chr03:031182011 0 W/31182011-31182011 FN3762-S SNP C -> G AC=1;AN=190;BQB=0.981942;DP=2675;DP4=1251,1359,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.245234;MQB=0.67577;MQSB=0;RPB=0.968424;SGB=53.6492;VDB=0.643899;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN3762-S.SNP.3:31182013 chr03:031182013 0 W/31182013-31182013 FN3762-S SNP A -> G AC=1;AN=190;BQB=0.932908;DP=2670;DP4=1233,1307,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.242697;MQB=0.709569;MQSB=0;RPB=0.998192;SGB=53.6492;VDB=0.637461;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN1719-S.SNP.3:31182964 chr03:031182964 0 W/31182964-31182964 FN1719-S SNP C -> A AC=1;AN=188;BQB=0.328257;DP=3636;DP4=2032,1565,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.208471;MQB=0.950011;MQSB=0.0319885;RPB=0.951889;SGB=11.7114;VDB=0.733113;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN2780-S.SNP.3:31186005 chr03:031186005 0 W/31186005-31186005 FN2780-S SNP A -> C AC=1;AN=198;BQB=0.7312;DP=4535;DP4=2288,2078,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0421169;MQB=0.0360203;MQSB=6.939e-26;RPB=0.644578;SGB=112.051;VDB=0.142938;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN-115.SNP.3:31187547 chr03:031187547 0 W/31187547-31187547 FN-115 Single Base Substitution T-G INTRON HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3927-S.SNP.3:31188056 chr03:031188056 0 W/31188056-31188056 FN3927-S SNP C -> T AC=1;AN=158;BQB=0.964195;DP=2769;DP4=1269,1393,3,14;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.264717;MQB=0.909403;MQSB=0;RPB=0.999952;SGB=68.9144;VDB=0.0286515;EFF=INTRON(MODIFIER||||132|LOC_Os03g54860|protein_coding|CODING|LOC_Os03g54860.1|3|1) FN579-S.SNP.3:31198028 chr03:031198028 0 W/31198028-31198028 FN579-S Single Base Substitution A-T START_LOST HET LOC_Os03g54880 antigen peptide transporter-like 2, putative, expressed SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN3572-S.SNP.3:31199906 chr03:031199906 0 W/31199906-31199906 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.982253;DP=2682;DP4=1379,1254,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02749e-08;MQSB=0.979129;RPB=0.90577;SGB=53.5223;VDB=0.844193;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.3:31207889 chr03:031207889 0 W/31207889-31207889 FN861-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN2360.SNP.3:31208079 chr03:031208079 0 W/31208079-31208079 FN2360 SNP C -> A AC=1;AN=192;BQB=0.0704434;DP=4714;DP4=2454,2046,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.10707e-14;MQSB=0.998233;RPB=0.920201;SGB=93.2452;VDB=0.326023;EFF=UTR_3_PRIME(MODIFIER||1027||1049|LOC_Os03g54900|protein_coding|CODING|LOC_Os03g54900.2|3|1),UTR_3_PRIME(MODIFIER||1027||1049|LOC_Os03g54900|protein_coding|CODING|LOC_Os03g54900.1|3|1) FN918-S.SNP.3:31213502 chr03:031213502 0 W/31213502-31213502 FN918-S Single Base Substitution A-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-401.SNP.3:31214314 chr03:031214314 0 W/31214314-31214314 FN-401 Single Base Substitution A-T INTERGENIC HOMO SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.3:31214314 chr03:031214314 0 W/31214314-31214314 FN401-S Single Base Substitution A-T INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN2627-S.SNP.3:31215816 chr03:031215816 0 W/31215816-31215816 FN2627-S SNP A -> T AC=1;AN=200;BQB=0.83103;DP=4933;DP4=2261,2270,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93155e-09;MQSB=0.978686;RPB=0.98197;SGB=-12.5051;VDB=0.488147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.3:31216766 chr03:031216766 0 W/31216766-31216766 FN1050-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1050-S.SNP.3:31216767 chr03:031216767 0 W/31216767-31216767 FN1050-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2765-S.SNP.3:31234634 chr03:031234634 0 W/31234634-31234634 FN2765-S SNP C -> T AC=2;AN=198;BQB=0.720638;DP=4000;DP4=1981,1743,16,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.51335e-19;MQSB=0.848392;RPB=0.958227;SGB=1.04222;VDB=0.415258;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.3:31235780 chr03:031235780 0 W/31235780-31235780 FN514-S Single Base Substitution C-T INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3419-S.SNP.3:31237737 chr03:031237737 0 W/31237737-31237737 FN3419-S SNP C -> T AC=2;AN=184;BQB=0.984169;DP=4236;DP4=2032,2041,19,25;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00212465;MQB=3.39678e-16;MQSB=0.363807;RPB=0.304868;SGB=193.44;VDB=0.815354;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S289|759|LOC_Os03g54950|protein_coding|CODING|LOC_Os03g54950.1|2|1) FN3855-S.SNP.3:31237998 chr03:031237998 0 W/31237998-31237998 FN3855-S SNP G -> A AC=1;AN=158;BQB=0.891123;DP=2331;DP4=1076,1150,10,14;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.002145;MQB=5.34049e-12;MQSB=0.785889;RPB=0.337402;SGB=99.5005;VDB=0.545786;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W376*|759|LOC_Os03g54950|protein_coding|CODING|LOC_Os03g54950.1|2|1) FN2781-S.SNP.3:31241921 chr03:031241921 0 W/31241921-31241921 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.786699;DP=3856;DP4=1951,1759,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00855809;MQB=0.0478863;MQSB=0.0520641;RPB=0.461861;SGB=83.2905;VDB=0.996655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1217Q|1867|LOC_Os03g54960|protein_coding|CODING|LOC_Os03g54960.1|3|1) FN2680-S.SNP.3:31244406 chr03:031244406 0 W/31244406-31244406 FN2680-S SNP C -> T AC=2;AN=200;BQB=0.710255;DP=4411;DP4=2282,1801,30,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.83178e-41;MQSB=0.964253;RPB=0.795191;SGB=306.557;VDB=0.500267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G410S|1867|LOC_Os03g54960|protein_coding|CODING|LOC_Os03g54960.1|2|1) FN2680-S.SNP.3:31244407 chr03:031244407 0 W/31244407-31244407 FN2680-S SNP C -> T AC=2;AN=200;BQB=0.838253;DP=4423;DP4=2302,1807,30,41;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.8569e-42;MQSB=0.957454;RPB=0.740846;SGB=315.767;VDB=0.582749;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E409|1867|LOC_Os03g54960|protein_coding|CODING|LOC_Os03g54960.1|2|1) FN3430-S.SNP.3:31249220 chr03:031249220 0 W/31249220-31249220 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.993448;DP=2421;DP4=1055,1280,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.96898e-08;MQSB=0.985949;RPB=0.861218;SGB=18.2315;VDB=0.972133;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.3:31256890 chr03:031256890 0 W/31256890-31256890 FN4275-S SNP A -> G AC=1;AN=170;BQB=0.627024;DP=2603;DP4=1326,1205,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.69067e-09;MQSB=0.967805;RPB=0.813833;SGB=48.6486;VDB=0.547511;EFF=INTRON(MODIFIER||||113|LOC_Os03g54980|protein_coding|CODING|LOC_Os03g54980.1|2|1) FN1050-S.SNP.3:31263051 chr03:031263051 0 W/31263051-31263051 FN1050-S Single Base Substitution G-A INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN3426-S.SNP.3:31265836 chr03:031265836 0 W/31265836-31265836 FN3426-S SNP G -> C AC=1;AN=184;BQB=0.998567;DP=3237;DP4=1523,1446,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000308928;MQB=0.000308563;MQSB=0.34681;RPB=0.360842;SGB=30.6558;VDB=0.182239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.3:31268463 chr03:031268463 0 W/31268463-31268463 FN2235-S SNP A -> T AC=1;AN=190;BQB=0.272669;DP=5438;DP4=2880,2204,21,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000367782;MQB=1.00307e-19;MQSB=0.999709;RPB=0.644749;SGB=153.834;VDB=0.298404;EFF=INTERGENIC(MODIFIER||||||||||1) FN585-S.SNP.3:31268966 chr03:031268966 0 W/31268966-31268966 FN585-S Single Base Substitution C-A INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN2285.SNP.3:31269127 chr03:031269127 0 W/31269127-31269127 FN2285 SNP C -> A AC=2;AN=192;BQB=0.903823;DP=4557;DP4=1935,2328,23,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.51112e-24;MQSB=0.113331;RPB=0.950524;SGB=1.59742;VDB=0.53567;EFF=STOP_LOST(HIGH|MISSENSE|taG/taT|*196Y|195|LOC_Os03g54990|protein_coding|CODING|LOC_Os03g54990.1|1|1) FN1334-S.SNP.3:31271858 chr03:031271858 0 W/31271858-31271858 FN1334-S Single Base Substitution G-C INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2378.SNP.3:31275346 chr03:031275346 0 W/31275346-31275346 FN2378 SNP A -> G AC=1;AN=192;BQB=0.194953;DP=6267;DP4=2558,3164,30,26;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0215414;MQB=0.485028;MQSB=0;RPB=0.84609;SGB=7.80525;VDB=0.0587192;EFF=INTERGENIC(MODIFIER||||||||||1) FN-78.SNP.3:31275938 chr03:031275938 0 W/31275938-31275938 FN-78 Single Base Substitution T-C INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN323-S.SNP.3:31279510 chr03:031279510 0 W/31279510-31279510 FN323-S Single Base Substitution A-T INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2215-S.SNP.3:31281332 chr03:031281332 0 W/31281332-31281332 FN2215-S SNP T -> G AC=1;AN=190;BQB=0.959756;DP=5296;DP4=2350,2563,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.47455e-11;MQSB=0.960021;RPB=0.408054;SGB=13.4344;VDB=0.712546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.3:31281611 chr03:031281611 0 W/31281611-31281611 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.994662;DP=4740;DP4=2163,2324,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.43862e-16;MQSB=0.914773;RPB=0.613445;SGB=118.737;VDB=0.0272574;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.3:31283260 chr03:031283260 0 W/31283260-31283260 FN950-S Single Base Substitution T-G INTRON HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1355-S.SNP.3:31289274 chr03:031289274 0 W/31289274-31289274 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN977-S.SNP.3:31293888 chr03:031293888 0 W/31293888-31293888 FN977-S Single Base Substitution A-T INTERGENIC HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1096-S.SNP.3:31293940 chr03:031293940 0 W/31293940-31293940 FN1096-S Single Base Substitution C-A INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN925-S.SNP.3:31296724 chr03:031296724 0 W/31296724-31296724 FN925-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g55030 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN1441-S.SNP.3:31306954 chr03:031306954 0 W/31306954-31306954 FN1441-S Single Base Substitution G-A INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2411.SNP.3:31307985 chr03:031307985 0 W/31307985-31307985 FN2411 SNP G -> A AC=1;AN=200;BQB=0.43582;DP=4513;DP4=2095,2147,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.08187e-17;MQSB=0.999871;RPB=0.86953;SGB=-42.4225;VDB=0.907215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.3:31310747 chr03:031310747 0 W/31310747-31310747 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.0215784;DP=3609;DP4=1622,1905,6,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5074e-05;MQSB=0.996893;RPB=0.588375;SGB=-200.044;VDB=0.566976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.3:31311347 chr03:031311347 0 W/31311347-31311347 FN2688-S SNP C -> A AC=1;AN=200;BQB=0.00349593;DP=4737;DP4=2669,1835,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03376e-05;MQSB=0.887303;RPB=0.235066;SGB=33.0593;VDB=0.462962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.3:31311879 chr03:031311879 0 W/31311879-31311879 FN2785-S SNP G -> T AC=1;AN=198;BQB=0.994811;DP=4057;DP4=1868,1934,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00574e-07;MQSB=0.905369;RPB=0.62357;SGB=4.56404;VDB=0.248028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.3:31313195 chr03:031313195 0 W/31313195-31313195 FN2617-S SNP T -> C AC=1;AN=198;BQB=0.31648;DP=4366;DP4=2117,1952,19,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09973e-15;MQSB=0.979144;RPB=0.725923;SGB=26.8957;VDB=0.335386;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.3:31314605 chr03:031314605 0 W/31314605-31314605 FN2491 SNP A -> C AC=1;AN=200;BQB=0.880983;DP=4829;DP4=2266,2054,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54832e-11;MQSB=0.940685;RPB=0.920464;SGB=47.7211;VDB=0.681156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.3:31325618 chr03:031325618 0 W/31325618-31325618 FN3485-S SNP C -> A AC=1;AN=184;BQB=0.995061;DP=2892;DP4=1225,1563,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03127e-11;MQSB=0.997265;RPB=0.984768;SGB=60.4004;VDB=0.740727;EFF=INTRON(MODIFIER||||314|LOC_Os03g55080|protein_coding|CODING|LOC_Os03g55080.1|1|1) FN1349-S.SNP.3:31327199 chr03:031327199 0 W/31327199-31327199 FN1349-S Single Base Substitution C-T INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN1349-S.SNP.3:31327206 chr03:031327206 0 W/31327206-31327206 FN1349-S Single Base Substitution T-G INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN3799-S.SNP.3:31336862 chr03:031336862 0 W/31336862-31336862 FN3799-S SNP A -> G AC=1;AN=190;BQB=0.949997;DP=2572;DP4=1200,1279,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.44292e-10;MQSB=0.932991;RPB=0.939645;SGB=67.3108;VDB=0.627846;EFF=INTRON(MODIFIER||||591|LOC_Os03g55090|protein_coding|CODING|LOC_Os03g55090.1|4|1) FN4020-S.SNP.3:31341845 chr03:031341845 0 W/31341845-31341845 FN4020-S SNP T -> C AC=1;AN=168;BQB=0.677344;DP=1800;DP4=935,793,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.74685e-07;MQSB=0.74217;RPB=0.900447;SGB=34.748;VDB=0.128163;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.3:31342394 chr03:031342394 0 W/31342394-31342394 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-366.SNP.3:31346979 chr03:031346979 0 W/31346979-31346979 FN-366 Single Base Substitution A-G INTRON HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3554-S.SNP.3:31349209 chr03:031349209 0 W/31349209-31349209 FN3554-S SNP T -> A AC=1;AN=188;BQB=0.628753;DP=2757;DP4=1285,1284,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.25611e-05;MQSB=0.998612;RPB=0.842074;SGB=44.4357;VDB=0.984909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F381Y|726|LOC_Os03g55100|protein_coding|CODING|LOC_Os03g55100.1|4|1) FN3718-S.SNP.3:31350882 chr03:031350882 0 W/31350882-31350882 FN3718-S SNP T -> A AC=1;AN=190;BQB=0.0922265;DP=3011;DP4=1591,1308,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15479e-05;MQSB=0.833517;RPB=0.996544;SGB=7.21887;VDB=0.652558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.3:31351250 chr03:031351250 0 W/31351250-31351250 FN2599-S SNP C -> A AC=1;AN=198;BQB=0.235803;DP=4528;DP4=2235,1866,13,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.76819e-16;MQSB=0.331533;RPB=0.00247417;SGB=-114.679;VDB=0.211592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.3:31353702 chr03:031353702 0 W/31353702-31353702 FN2602-S SNP C -> A AC=1;AN=198;BQB=0.997068;DP=4055;DP4=1898,1963,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.85177e-11;MQSB=0.99998;RPB=0.180276;SGB=72.5245;VDB=0.816962;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.3:31358220 chr03:031358220 0 W/31358220-31358220 FN-143 Single Base Substitution G-A INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2426.SNP.3:31370257 chr03:031370257 0 W/31370257-31370257 FN2426 SNP T -> A AC=2;AN=200;BQB=0.430305;DP=5008;DP4=2391,2249,20,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.38195e-22;MQSB=0.758881;RPB=0.990691;SGB=6.25521;VDB=0.674084;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.3:31376491 chr03:031376491 0 W/31376491-31376491 W313-1-1-1-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN857-S.SNP.3:31378840 chr03:031378840 0 W/31378840-31378840 FN857-S Single Base Substitution T-C INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN4113-S.SNP.3:31386275 chr03:031386275 0 W/31386275-31386275 FN4113-S SNP A -> T AC=1;AN=182;BQB=0.65431;DP=2627;DP4=1215,1299,14,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.13188e-17;MQSB=0.994017;RPB=0.990956;SGB=138.839;VDB=0.249655;EFF=INTRON(MODIFIER||||294|LOC_Os03g55140|protein_coding|CODING|LOC_Os03g55140.1|6|1),INTRON(MODIFIER||||256|LOC_Os03g55140|protein_coding|CODING|LOC_Os03g55140.2|7|1) FN1302-S.SNP.3:31386319 chr03:031386319 0 W/31386319-31386319 FN1302-S Single Base Substitution C-G INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2658-S.SNP.3:31392958 chr03:031392958 0 W/31392958-31392958 FN2658-S SNP G -> T AC=1;AN=200;BQB=0.913585;DP=5166;DP4=2377,2550,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62923e-07;MQSB=0.997;RPB=0.344139;SGB=45.0543;VDB=0.0534076;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T334|1002|LOC_Os03g55164|protein_coding|CODING|LOC_Os03g55164.1|6|1) FN2797-S.SNP.3:31393996 chr03:031393996 0 W/31393996-31393996 FN2797-S SNP A -> G AC=1;AN=198;BQB=0.981516;DP=4069;DP4=1793,1982,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.55897e-09;MQSB=0.765093;RPB=0.917626;SGB=50.9344;VDB=0.495598;EFF=INTRON(MODIFIER||||1002|LOC_Os03g55164|protein_coding|CODING|LOC_Os03g55164.1|7|1) FN3940-S.SNP.3:31403357 chr03:031403357 0 W/31403357-31403357 FN3940-S SNP T -> A AC=2;AN=158;BQB=0.681049;DP=2487;DP4=1149,1153,20,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.2546e-14;MQSB=0.999707;RPB=0.466491;SGB=21.2584;VDB=0.888596;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.3:31405544 chr03:031405544 0 W/31405544-31405544 FN2646-S SNP C -> T AC=2;AN=200;BQB=0.999571;DP=4258;DP4=1913,2110,24,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.67866e-33;MQSB=0.541512;RPB=0.975533;SGB=261.497;VDB=0.0447699;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.3:31406358 chr03:031406358 0 W/31406358-31406358 FN685-S Single Base Substitution C-A INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN4107-S.SNP.3:31415916 chr03:031415916 0 W/31415916-31415916 FN4107-S SNP G -> A AC=1;AN=182;BQB=0.973503;DP=3211;DP4=1524,1618,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.90434e-07;MQSB=0.90816;RPB=0.530744;SGB=28.6061;VDB=0.912116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T426I|892|LOC_Os03g55210|protein_coding|CODING|LOC_Os03g55210.1|1|1) FN-232.SNP.3:31417529 chr03:031417529 0 W/31417529-31417529 FN-232 Single Base Substitution G-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN395-S.SNP.3:31418773 chr03:031418773 0 W/31418773-31418773 FN395-S Single Base Substitution C-G INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-249.SNP.3:31421523 chr03:031421523 0 W/31421523-31421523 FN-249 Single Base Substitution C-A INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN3892-S.SNP.3:31424071 chr03:031424071 0 W/31424071-31424071 FN3892-S SNP T -> C AC=1;AN=158;BQB=0.989377;DP=2366;DP4=1136,1149,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.18639e-05;MQSB=0.987427;RPB=0.694775;SGB=25.2211;VDB=0.702808;EFF=INTRON(MODIFIER||||317|LOC_Os03g55220|protein_coding|CODING|LOC_Os03g55220.1|4|1),INTRON(MODIFIER||||317|LOC_Os03g55220|protein_coding|CODING|LOC_Os03g55220.2|4|1) FN-98.SNP.3:31439432 chr03:031439432 0 W/31439432-31439432 FN-98 Single Base Substitution T-G INTERGENIC HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2646-S.SNP.3:31446429 chr03:031446429 0 W/31446429-31446429 FN2646-S SNP A -> G AC=1;AN=200;BQB=0.828899;DP=5089;DP4=2623,2278,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51259e-10;MQSB=0.911592;RPB=0.867115;SGB=61.9006;VDB=0.75218;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.3:31447239 chr03:031447239 0 W/31447239-31447239 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. W247-2-1.SNP.3:31451198 chr03:031451198 0 W/31451198-31451198 W247-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3854-S.SNP.3:31461980 chr03:031461980 0 W/31461980-31461980 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.997052;DP=2518;DP4=1148,1252,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.13809e-06;MQSB=0.999658;RPB=0.832245;SGB=11.9715;VDB=0.961034;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A221V|375|LOC_Os03g55280|protein_coding|CODING|LOC_Os03g55280.1|3|1) FN3854-S.SNP.3:31461982 chr03:031461982 0 W/31461982-31461982 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.936587;DP=2538;DP4=1166,1255,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.25159e-06;MQSB=0.99324;RPB=0.950278;SGB=33.9591;VDB=0.896306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P222T|375|LOC_Os03g55280|protein_coding|CODING|LOC_Os03g55280.1|3|1) FN-119.SNP.3:31473090 chr03:031473090 0 W/31473090-31473090 FN-119 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g55320 protein phosphatase 2C, putative, expressed SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2330.SNP.3:31473741 chr03:031473741 0 W/31473741-31473741 FN2330 SNP G -> A AC=2;AN=192;BQB=0.995771;DP=5077;DP4=2216,2557,26,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.32794e-25;MQSB=0.902815;RPB=0.460716;SGB=54.2852;VDB=0.306338;EFF=INTRON(MODIFIER||||380|LOC_Os03g55320|protein_coding|CODING|LOC_Os03g55320.1|2|1),INTRON(MODIFIER||||317|LOC_Os03g55320|protein_coding|CODING|LOC_Os03g55320.2|2|1),INTRON(MODIFIER||||255|LOC_Os03g55320|protein_coding|CODING|LOC_Os03g55320.3|2|1) W427-1-1.SNP.3:31480518 chr03:031480518 0 W/31480518-31480518 W427-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2165-S.SNP.3:31480861 chr03:031480861 0 W/31480861-31480861 FN2165-S SNP A -> C AC=1;AN=168;BQB=0.90826;DP=2900;DP4=1500,1368,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.90903e-05;MQSB=0.986171;RPB=0.987032;SGB=7.59999;VDB=0.0348254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Cgc|S175R|484|LOC_Os03g55340|protein_coding|CODING|LOC_Os03g55340.1|1|1) FN1423-S.SNP.3:31490524 chr03:031490524 0 W/31490524-31490524 FN1423-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1182-S.SNP.3:31495606 chr03:031495606 0 W/31495606-31495606 FN1182-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2293.SNP.3:31497481 chr03:031497481 0 W/31497481-31497481 FN2293 SNP T -> G AC=2;AN=192;BQB=0.975926;DP=5044;DP4=2548,2196,13,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.14862e-14;MQSB=0.999531;RPB=0.773749;SGB=103.983;VDB=0.494171;EFF=INTRON(MODIFIER||||505|LOC_Os03g55360|protein_coding|CODING|LOC_Os03g55360.1|2|1) FN914-S.SNP.3:31501564 chr03:031501564 0 W/31501564-31501564 FN914-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g55370 expressed protein SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN863-S.SNP.3:31501792 chr03:031501792 0 W/31501792-31501792 FN863-S Single Base Substitution G-A INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2273-S.SNP.3:31514800 chr03:031514800 0 W/31514800-31514800 FN2273-S SNP A -> G AC=1;AN=190;BQB=0.278673;DP=4795;DP4=2381,2183,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.31274e-15;MQSB=0.935336;RPB=0.68531;SGB=121.957;VDB=0.247092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.3:31518214 chr03:031518214 0 W/31518214-31518214 FN2188-S SNP T -> C AC=1;AN=190;BQB=0.0119663;DP=4264;DP4=2388,1584,16,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.98901e-10;MQSB=0.998513;RPB=0.999956;SGB=46.6446;VDB=0.994;EFF=INTRON(MODIFIER||||230|LOC_Os03g55400|protein_coding|CODING|LOC_Os03g55400.1|2|1) FN2491.SNP.3:31543308 chr03:031543308 0 W/31543308-31543308 FN2491 SNP C -> T AC=1;AN=200;BQB=0.772294;DP=4818;DP4=2260,2327,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90843e-09;MQSB=0.979652;RPB=0.75358;SGB=58.8698;VDB=0.772667;EFF=UTR_3_PRIME(MODIFIER||165||303|LOC_Os03g55450|protein_coding|CODING|LOC_Os03g55450.1|1|1),UTR_3_PRIME(MODIFIER||165||303|LOC_Os03g55450|protein_coding|CODING|LOC_Os03g55450.2|2|1) FN4122-S.SNP.3:31549446 chr03:031549446 0 W/31549446-31549446 FN4122-S SNP A -> T AC=1;AN=182;BQB=0.676398;DP=3735;DP4=2122,1503,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.55108e-06;MQSB=0.942254;RPB=0.924421;SGB=39.1386;VDB=0.840167;EFF=INTRON(MODIFIER||||158|LOC_Os03g55460|protein_coding|CODING|LOC_Os03g55460.1|2|1) W247-2-1.SNP.3:31550992 chr03:031550992 0 W/31550992-31550992 W247-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN-313.SNP.3:31553527 chr03:031553527 0 W/31553527-31553527 FN-313 Single Base Substitution A-T INTERGENIC HOMO SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN-96.SNP.3:31553527 chr03:031553527 0 W/31553527-31553527 FN-96 Single Base Substitution A-T INTERGENIC HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN3911-S.SNP.3:31553527 chr03:031553527 0 W/31553527-31553527 FN3911-S SNP A -> T AC=1;AN=158;BQB=0.723428;DP=2594;DP4=1051,1452,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.26802e-08;MQSB=0.861811;RPB=0.735074;SGB=55.806;VDB=0.525751;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.3:31563434 chr03:031563434 0 W/31563434-31563434 W463-2-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN4063-S.SNP.3:31569240 chr03:031569240 0 W/31569240-31569240 FN4063-S SNP T -> C AC=2;AN=168;BQB=0.65394;DP=2465;DP4=1159,1180,11,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.71721e-12;MQSB=0.999996;RPB=0.97712;SGB=44.0621;VDB=0.243279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M299T|408|LOC_Os03g55490|protein_coding|CODING|LOC_Os03g55490.1|5|1) FN2634-S.SNP.3:31572133 chr03:031572133 0 W/31572133-31572133 FN2634-S SNP A -> C AC=2;AN=200;BQB=0.91396;DP=3909;DP4=1944,1216,29,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=7.88986e-18;MQSB=0.000103613;RPB=0.999944;SGB=98.2923;VDB=0.242216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.3:31574375 chr03:031574375 0 W/31574375-31574375 FN3564-S SNP T -> C AC=1;AN=188;BQB=0.79589;DP=3232;DP4=1349,1679,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38648e-08;MQSB=0.610538;RPB=0.908123;SGB=13.2547;VDB=0.783038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.3:31576968 chr03:031576968 0 W/31576968-31576968 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.813335;DP=3161;DP4=1439,1603,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44897e-05;MQSB=0.979466;RPB=0.978252;SGB=18.2315;VDB=0.894887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.3:31578634 chr03:031578634 0 W/31578634-31578634 FN1506-S Single Base Substitution A-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2333.SNP.3:31582080 chr03:031582080 0 W/31582080-31582080 FN2333 SNP C -> T AC=1;AN=192;BQB=0.587462;DP=5123;DP4=2221,2351,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.81146e-11;MQSB=0.997686;RPB=0.370137;SGB=-108.11;VDB=0.710485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.3:31583816 chr03:031583816 0 W/31583816-31583816 FN3965-S SNP T -> G AC=1;AN=168;BQB=0.969479;DP=1888;DP4=768,1030,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.22106e-09;MQSB=0.99883;RPB=0.989231;SGB=27.0464;VDB=0.440591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.3:31586940 chr03:031586940 0 W/31586940-31586940 FN3511-S SNP G -> A AC=1;AN=188;BQB=0.918547;DP=2878;DP4=1389,1417,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.93795e-06;MQSB=0.593646;RPB=0.707655;SGB=35.3493;VDB=0.0623279;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.3:31590530 chr03:031590530 0 W/31590530-31590530 FN897-S Single Base Substitution T-C INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2218-S.SNP.3:31597914 chr03:031597914 0 W/31597914-31597914 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.727544;DP=3640;DP4=1878,1496,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.17738e-13;MQSB=0.0477195;RPB=0.999498;SGB=112.85;VDB=0.461043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R37L|413|LOC_Os03g55530|protein_coding|CODING|LOC_Os03g55530.1|1|1) FN2638-S.SNP.3:31598749 chr03:031598749 0 W/31598749-31598749 FN2638-S SNP C -> T AC=2;AN=200;BQB=0.245592;DP=4612;DP4=2057,2243,19,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.29088e-25;MQSB=0.994261;RPB=0.142561;SGB=148.425;VDB=0.157572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R198C|413|LOC_Os03g55530|protein_coding|CODING|LOC_Os03g55530.1|3|1) FN4150-S.SNP.3:31599741 chr03:031599741 0 W/31599741-31599741 FN4150-S SNP G -> A AC=2;AN=170;BQB=0.963202;DP=2516;DP4=1365,1056,27,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.09738e-21;MQSB=0.942059;RPB=0.10762;SGB=131.272;VDB=0.501549;EFF=UTR_3_PRIME(MODIFIER||342||413|LOC_Os03g55530|protein_coding|CODING|LOC_Os03g55530.1|3|1) FN3777-S.SNP.3:31617015 chr03:031617015 0 W/31617015-31617015 FN3777-S SNP T -> A AC=1;AN=190;BQB=0.818182;DP=2367;DP4=1256,1024,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41068e-07;MQSB=0.977135;RPB=0.484165;SGB=36.1006;VDB=0.763067;EFF=INTRON(MODIFIER||||777|LOC_Os03g55560|protein_coding|CODING|LOC_Os03g55560.1|3|1),INTRON(MODIFIER||||777|LOC_Os03g55560|protein_coding|CODING|LOC_Os03g55560.2|3|1) FN3777-S.SNP.3:31617016 chr03:031617016 0 W/31617016-31617016 FN3777-S SNP A -> C AC=1;AN=190;BQB=0.788847;DP=2356;DP4=1280,1014,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53962e-07;MQSB=0.89515;RPB=0.549196;SGB=36.1006;VDB=0.776151;EFF=INTRON(MODIFIER||||777|LOC_Os03g55560|protein_coding|CODING|LOC_Os03g55560.1|3|1),INTRON(MODIFIER||||777|LOC_Os03g55560|protein_coding|CODING|LOC_Os03g55560.2|3|1) FN869-S.SNP.3:31620691 chr03:031620691 0 W/31620691-31620691 FN869-S Single Base Substitution T-C INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2479.SNP.3:31621087 chr03:031621087 0 W/31621087-31621087 FN2479 SNP T -> C AC=1;AN=200;BQB=0.439736;DP=4868;DP4=2322,2264,8,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53707e-13;MQSB=0.986305;RPB=0.0545148;SGB=83.5316;VDB=0.856795;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.3:31622731 chr03:031622731 0 W/31622731-31622731 FN-110 Single Base Substitution C-A INTERGENIC HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2608-S.SNP.3:31636102 chr03:031636102 0 W/31636102-31636102 FN2608-S SNP T -> C AC=1;AN=198;BQB=0.917144;DP=4074;DP4=1685,2105,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000177514;MQSB=0.705185;RPB=0.809186;SGB=16.3688;VDB=0.323915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.3:31639384 chr03:031639384 0 W/31639384-31639384 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.997515;DP=2394;DP4=1166,1106,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0162907;MQB=0.000324105;MQSB=0.00810869;RPB=0.808348;SGB=71.8647;VDB=0.965981;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.3:31641049 chr03:031641049 0 W/31641049-31641049 FN2348 SNP A -> C AC=1;AN=192;BQB=0.995262;DP=5154;DP4=2454,2276,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0349243;MQB=0.00428431;MQSB=2.70687e-15;RPB=0.362308;SGB=86.1165;VDB=0.665509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.3:31648651 chr03:031648651 0 W/31648651-31648651 FN2328 SNP C -> A AC=2;AN=192;BQB=0.172223;DP=4970;DP4=2541,2098,38,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.69539e-35;MQSB=0.590483;RPB=0.964561;SGB=146.874;VDB=0.0895015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.3:31653017 chr03:031653017 0 W/31653017-31653017 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.208136;DP=4786;DP4=2184,2274,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62635e-08;MQSB=0.266902;RPB=0.727303;SGB=58.2954;VDB=0.742056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G42V|371|LOC_Os03g55600|protein_coding|CODING|LOC_Os03g55600.1|1|1) FN548-S.SNP.3:31658116 chr03:031658116 0 W/31658116-31658116 FN548-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN2134-S.SNP.3:31661015 chr03:031661015 0 W/31661015-31661015 FN2134-S SNP C -> A AC=2;AN=168;BQB=0.0475696;DP=4013;DP4=2023,1899,30,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.96543e-28;MQSB=0.967553;RPB=0.282789;SGB=4.44505;VDB=0.994008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.3:31661364 chr03:031661364 0 W/31661364-31661364 FN1093-S Single Base Substitution G-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2645-S.SNP.3:31664304 chr03:031664304 0 W/31664304-31664304 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.999887;DP=5290;DP4=2446,2502,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.50097e-15;MQSB=0.722724;RPB=0.489011;SGB=114.132;VDB=0.44275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.3:31667593 chr03:031667593 0 W/31667593-31667593 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3501-S.SNP.3:31669500 chr03:031669500 0 W/31669500-31669500 FN3501-S SNP G -> A AC=1;AN=188;BQB=0.949029;DP=2837;DP4=1360,1398,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.30207e-06;MQSB=0.6708;RPB=0.628782;SGB=35.3493;VDB=0.953162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.3:31679944 chr03:031679944 0 W/31679944-31679944 FN2297 SNP C -> T AC=1;AN=192;BQB=0.444643;DP=5056;DP4=2444,2293,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09093e-07;MQSB=0.753562;RPB=0.653766;SGB=26.3496;VDB=0.453122;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.3:31683346 chr03:031683346 0 W/31683346-31683346 FN1723-S SNP G -> T AC=1;AN=188;BQB=0.636129;DP=3550;DP4=1734,1760,15,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02047e-13;MQSB=0.97415;RPB=0.609801;SGB=-41.4749;VDB=0.259319;EFF=INTRON(MODIFIER||||400|LOC_Os03g55640|protein_coding|CODING|LOC_Os03g55640.3|3|1),INTRON(MODIFIER||||470|LOC_Os03g55640|protein_coding|CODING|LOC_Os03g55640.1|3|1),INTRON(MODIFIER||||439|LOC_Os03g55640|protein_coding|CODING|LOC_Os03g55640.2|3|1) FN_N1-130-1.SNP.3:31683346 chr03:031683346 0 W/31683346-31683346 FN_N1-130-1 Single Base Substitution G-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN745-S.SNP.3:31695534 chr03:031695534 0 W/31695534-31695534 FN745-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g55670 expressed protein SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN-104.SNP.3:31696047 chr03:031696047 0 W/31696047-31696047 FN-104 Single Base Substitution C-T INTRON HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3826-S.SNP.3:31711575 chr03:031711575 0 W/31711575-31711575 FN3826-S SNP A -> G AC=1;AN=190;BQB=0.972493;DP=2462;DP4=1268,1125,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22359e-06;MQSB=0.995316;RPB=0.495514;SGB=21.8853;VDB=0.577326;EFF=INTERGENIC(MODIFIER||||||||||1) FN1698-S.SNP.3:31723710 chr03:031723710 0 W/31723710-31723710 FN1698-S SNP G -> A AC=1;AN=188;BQB=0.967078;DP=2392;DP4=1151,1170,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.79094e-08;MQSB=0.952239;RPB=0.765594;SGB=5.5382;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.3:31724089 chr03:031724089 0 W/31724089-31724089 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.601828;DP=4117;DP4=1966,1874,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242895;MQB=4.08866e-11;MQSB=0.924662;RPB=0.89999;SGB=61.7198;VDB=0.567936;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.3:31724351 chr03:031724351 0 W/31724351-31724351 FN4110-S SNP A -> T AC=1;AN=182;BQB=0.925586;DP=2060;DP4=1142,773,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.43989e-08;MQSB=0.997105;RPB=0.741046;SGB=42.6494;VDB=0.185854;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.3:31737279 chr03:031737279 0 W/31737279-31737279 FN4151-S SNP G -> A AC=1;AN=170;BQB=0.809671;DP=2505;DP4=1454,975,13,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.59525e-07;MQSB=0.68676;RPB=0.565329;SGB=41.7633;VDB=0.661145;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.3:31761794 chr03:031761794 0 W/31761794-31761794 FN2756-S SNP C -> T AC=1;AN=200;BQB=0.974716;DP=4675;DP4=2211,2233,13,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.68629e-09;MQSB=0.993655;RPB=0.0194343;SGB=29.4849;VDB=0.134258;EFF=INTRON(MODIFIER||||281|LOC_Os03g55784|protein_coding|CODING|LOC_Os03g55784.1|7|1) FN1023-S.SNP.3:31765115 chr03:031765115 0 W/31765115-31765115 FN1023-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1279-S.SNP.3:31773241 chr03:031773241 0 W/31773241-31773241 FN1279-S Single Base Substitution G-A INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN4234-S.SNP.3:31778911 chr03:031778911 0 W/31778911-31778911 FN4234-S SNP A -> C AC=2;AN=170;BQB=0.944758;DP=2641;DP4=1402,1148,7,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.73913e-07;MQSB=0.926947;RPB=0.808639;SGB=43.4296;VDB=0.049599;EFF=INTRON(MODIFIER||||262|LOC_Os03g55820|protein_coding|CODING|LOC_Os03g55820.1|4|1) FN2708-S.SNP.3:31781774 chr03:031781774 0 W/31781774-31781774 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.914778;DP=4850;DP4=2464,2039,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.50421e-14;MQSB=0.726643;RPB=0.933935;SGB=95.7111;VDB=0.178918;EFF=INTERGENIC(MODIFIER||||||||||1) 707-2.SNP.3:31783698 chr03:031783698 0 W/31783698-31783698 707-2 Single Base Substitution C-T INTERGENIC Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. FN576-S.SNP.3:31783985 chr03:031783985 0 W/31783985-31783985 FN576-S Single Base Substitution A-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN901-S.SNP.3:31789385 chr03:031789385 0 W/31789385-31789385 FN901-S Single Base Substitution A-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. W427-1-1.SNP.3:31790017 chr03:031790017 0 W/31790017-31790017 W427-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3347-S.SNP.3:31797470 chr03:031797470 0 W/31797470-31797470 FN3347-S SNP A -> G AC=2;AN=184;BQB=0.692248;DP=2729;DP4=1527,1037,28,14;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00439722;MQB=4.48779e-17;MQSB=0.0401723;RPB=0.940036;SGB=128.058;VDB=0.904877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E612G|1438|LOC_Os03g55860|protein_coding|CODING|LOC_Os03g55860.1|4|1) FN3383-S.SNP.3:31798072 chr03:031798072 0 W/31798072-31798072 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.630321;DP=3197;DP4=1569,1490,10,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.41036e-11;MQSB=0.994674;RPB=0.151815;SGB=48.493;VDB=0.606486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D813N|1438|LOC_Os03g55860|protein_coding|CODING|LOC_Os03g55860.1|4|1) FN926-S.SNP.3:31798319 chr03:031798319 0 W/31798319-31798319 FN926-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g55860 retrotransposon protein, putative, unclassified, expressed SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3105-S.SNP.3:31804952 chr03:031804952 0 W/31804952-31804952 FN3105-S SNP A -> T AC=1;AN=184;BQB=0.997339;DP=3073;DP4=1336,1624,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.56253e-08;MQSB=0.7287;RPB=0.766764;SGB=39.2697;VDB=0.848447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.3:31806354 chr03:031806354 0 W/31806354-31806354 FN3762-S SNP G -> A AC=1;AN=190;BQB=0.852656;DP=3182;DP4=1500,1585,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65249e-07;MQSB=0.917949;RPB=0.894125;SGB=62.7569;VDB=0.854446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.3:31822113 chr03:031822113 0 W/31822113-31822113 FN3723-S SNP T -> A AC=1;AN=190;BQB=0.844929;DP=2973;DP4=1430,1423,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2686e-06;MQSB=0.979096;RPB=0.98839;SGB=32.5467;VDB=0.815245;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.3:31825294 chr03:031825294 0 W/31825294-31825294 FN1239-S Single Base Substitution A-C INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2478.SNP.3:31831317 chr03:031831317 0 W/31831317-31831317 FN2478 SNP A -> C AC=1;AN=200;BQB=0.149442;DP=4759;DP4=2093,2383,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.53492e-08;MQSB=0.999394;RPB=0.652327;SGB=26.8797;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.3:31832364 chr03:031832364 0 W/31832364-31832364 FN1396-S Single Base Substitution T-A INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2091-S.SNP.3:31844232 chr03:031844232 0 W/31844232-31844232 FN2091-S SNP C -> A AC=1;AN=168;BQB=0.385861;DP=2373;DP4=906,1386,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.46619e-08;MQSB=0.984867;RPB=0.990425;SGB=7.05233;VDB=0.308786;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P57|455|LOC_Os03g55920|protein_coding|CODING|LOC_Os03g55920.1|1|1) FN3750-S.SNP.3:31851414 chr03:031851414 0 W/31851414-31851414 FN3750-S SNP G -> A AC=1;AN=190;BQB=0.831944;DP=2667;DP4=1656,876,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85924e-09;MQSB=0.298789;RPB=0.968056;SGB=26.2136;VDB=0.0922111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.3:31852736 chr03:031852736 0 W/31852736-31852736 FN1409-S Single Base Substitution C-T INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2554-S.SNP.3:31852753 chr03:031852753 0 W/31852753-31852753 FN2554-S SNP T -> A AC=1;AN=198;BQB=0.335565;DP=4334;DP4=2024,2087,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000230734;MQB=3.85507e-14;MQSB=0.991199;RPB=0.797888;SGB=79.6954;VDB=0.291958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.3:31863571 chr03:031863571 0 W/31863571-31863571 FN1477-S Single Base Substitution A-G INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN3580-S.SNP.3:31868673 chr03:031868673 0 W/31868673-31868673 FN3580-S SNP A -> T AC=1;AN=188;BQB=0.980878;DP=2634;DP4=1254,1247,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.24213e-05;MQSB=0.916596;RPB=0.341941;SGB=18.2682;VDB=0.878874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.3:31869750 chr03:031869750 0 W/31869750-31869750 FN2128-S SNP C -> A AC=2;AN=168;BQB=0.714901;DP=2067;DP4=1048,965,8,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.18906e-09;MQSB=0.987044;RPB=0.667795;SGB=31.908;VDB=0.384713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S30Y|217|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S30Y|226|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S30Y|242|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.1|1|1) FN4156-S.SNP.3:31870444 chr03:031870444 0 W/31870444-31870444 FN4156-S SNP T -> C AC=1;AN=170;BQB=0.773132;DP=2480;DP4=1109,1264,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0153226;MQB=0.164574;MQSB=0.0939593;RPB=0.0796116;SGB=56.7575;VDB=0.478388;EFF=UTR_3_PRIME(MODIFIER||54||217|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.3|2|1),UTR_3_PRIME(MODIFIER||54||242|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.1|1|1),INTRON(MODIFIER||||226|LOC_Os03g55990|protein_coding|CODING|LOC_Os03g55990.2|1|1) FN3666-S.SNP.3:31883664 chr03:031883664 0 W/31883664-31883664 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.990703;DP=2834;DP4=1388,1329,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00811574;MQB=0.694675;MQSB=2.87284e-13;RPB=0.544239;SGB=80.9724;VDB=0.835803;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.3:31887388 chr03:031887388 0 W/31887388-31887388 FN772-S Single Base Substitution T-C INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN814-S.SNP.3:31889959 chr03:031889959 0 W/31889959-31889959 FN814-S Single Base Substitution G-A INTRON HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1233-S.SNP.3:31890710 chr03:031890710 0 W/31890710-31890710 FN1233-S Single Base Substitution T-G INTRON HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3833-S.SNP.3:31891039 chr03:031891039 0 W/31891039-31891039 FN3833-S SNP A -> T AC=1;AN=190;BQB=0.627079;DP=2606;DP4=1042,1426,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.20422e-10;MQSB=0.997726;RPB=0.849496;SGB=71.6393;VDB=0.353059;EFF=INTRON(MODIFIER||||141|LOC_Os03g56020|protein_coding|CODING|LOC_Os03g56020.1|2|1) FN418-S.SNP.3:31894512 chr03:031894512 0 W/31894512-31894512 FN418-S Single Base Substitution G-A INTRON HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3947-S.SNP.3:31895019 chr03:031895019 0 W/31895019-31895019 FN3947-S SNP A -> T AC=2;AN=168;BQB=0.920817;DP=2655;DP4=1141,1407,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.36441e-27;MQSB=0.989988;RPB=0.24211;SGB=90.2476;VDB=0.100169;EFF=INTRON(MODIFIER||||141|LOC_Os03g56020|protein_coding|CODING|LOC_Os03g56020.1|2|1) FN3947-S.SNP.3:31895020 chr03:031895020 0 W/31895020-31895020 FN3947-S SNP G -> A AC=2;AN=168;BQB=0.739759;DP=2651;DP4=1146,1392,17,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.37838e-27;MQSB=0.980628;RPB=0.180383;SGB=137.672;VDB=0.11116;EFF=INTRON(MODIFIER||||141|LOC_Os03g56020|protein_coding|CODING|LOC_Os03g56020.1|2|1) FN1379-S.SNP.3:31897807 chr03:031897807 0 W/31897807-31897807 FN1379-S Single Base Substitution G-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-117.SNP.3:31900522 chr03:031900522 0 W/31900522-31900522 FN-117 Single Base Substitution G-A INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN-350.SNP.3:31902772 chr03:031902772 0 W/31902772-31902772 FN-350 Single Base Substitution C-T INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2365.SNP.3:31907183 chr03:031907183 0 W/31907183-31907183 FN2365 SNP C -> T AC=2;AN=192;BQB=0.254643;DP=4885;DP4=2275,2238,25,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.20036e-26;MQSB=0.994704;RPB=0.988778;SGB=-51.8826;VDB=0.669209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.3:31907194 chr03:031907194 0 W/31907194-31907194 FN2365 SNP T -> A AC=2;AN=192;BQB=0.643887;DP=4921;DP4=2325,2275,22,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.22595e-26;MQSB=0.96503;RPB=0.998015;SGB=55.8496;VDB=0.5667;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.3:31907195 chr03:031907195 0 W/31907195-31907195 FN2365 SNP G -> T AC=2;AN=192;BQB=0.691209;DP=4899;DP4=2318,2276,22,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.68785e-26;MQSB=0.98585;RPB=0.992958;SGB=157.404;VDB=0.564674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.3:31914769 chr03:031914769 0 W/31914769-31914769 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.245196;DP=4552;DP4=2097,2225,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.62492e-08;MQSB=0.602164;RPB=0.90028;SGB=21.559;VDB=0.586299;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.3:31915072 chr03:031915072 0 W/31915072-31915072 FN740-S Single Base Substitution G-A INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3610-S.SNP.3:31922276 chr03:031922276 0 W/31922276-31922276 FN3610-S SNP C -> A AC=1;AN=190;BQB=0.519199;DP=2350;DP4=1012,1253,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.24041e-06;MQSB=0.911586;RPB=0.469038;SGB=28.9929;VDB=0.233701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q53K|652|LOC_Os03g56050|protein_coding|CODING|LOC_Os03g56050.1|1|1) FN3331-S.SNP.3:31922368 chr03:031922368 0 W/31922368-31922368 FN3331-S SNP C -> A AC=2;AN=184;BQB=0.94917;DP=3181;DP4=1380,1673,18,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.14611e-20;MQSB=0.299921;RPB=0.670095;SGB=175.352;VDB=0.20721;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V83|652|LOC_Os03g56050|protein_coding|CODING|LOC_Os03g56050.1|1|1) FN1916.SNP.3:31922707 chr03:031922707 0 W/31922707-31922707 FN1916 Single Base Substitution G-A HET LOC_Os03g56050 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2130-S.SNP.3:31923776 chr03:031923776 0 W/31923776-31923776 FN2130-S SNP G -> T AC=2;AN=168;BQB=0.619122;DP=3470;DP4=1637,1778,22,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.28313e-19;MQSB=0.887371;RPB=0.414743;SGB=-94.7442;VDB=0.121335;EFF=INTRON(MODIFIER||||652|LOC_Os03g56050|protein_coding|CODING|LOC_Os03g56050.1|4|1) FN424-S.SNP.3:31934275 chr03:031934275 0 W/31934275-31934275 FN424-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3559-S.SNP.3:31934337 chr03:031934337 0 W/31934337-31934337 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.994999;DP=1582;DP4=382,1066,6,9;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=5.26292e-06;MQSB=0.00330709;RPB=0.511109;SGB=62.6088;VDB=0.818589;EFF=UTR_5_PRIME(MODIFIER||794||457|LOC_Os03g56060|protein_coding|CODING|LOC_Os03g56060.1|1|1) FN3777-S.SNP.3:31936662 chr03:031936662 0 W/31936662-31936662 FN3777-S SNP T -> A AC=1;AN=190;BQB=0.975994;DP=2511;DP4=1092,1207,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.09816e-05;MQSB=0.994628;RPB=0.77115;SGB=28.9929;VDB=0.851111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.3:31937131 chr03:031937131 0 W/31937131-31937131 FN4181-S SNP G -> A AC=1;AN=170;BQB=0.12582;DP=2463;DP4=1225,1189,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.52156e-05;MQSB=0.741715;RPB=0.780986;SGB=34.5445;VDB=0.683888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.3:31937612 chr03:031937612 0 W/31937612-31937612 FN2432 SNP C -> T AC=1;AN=200;BQB=0.971455;DP=5260;DP4=2779,2189,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.43748e-12;MQSB=0.837286;RPB=0.923472;SGB=58.2954;VDB=0.8069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.3:31940659 chr03:031940659 0 W/31940659-31940659 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.189325;DP=5032;DP4=2411,2292,21,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42327e-17;MQSB=0.888852;RPB=0.827926;SGB=-3.42751;VDB=0.763788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.3:31941483 chr03:031941483 0 W/31941483-31941483 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN928-S.SNP.3:31941773 chr03:031941773 0 W/31941773-31941773 FN928-S Single Base Substitution T-G INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN-161.SNP.3:31953963 chr03:031953963 0 W/31953963-31953963 FN-161 Single Base Substitution G-A INTRON HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN-23.SNP.3:31959397 chr03:031959397 0 W/31959397-31959397 FN-23 Single Base Substitution C-T INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-234.SNP.3:31960318 chr03:031960318 0 W/31960318-31960318 FN-234 Single Base Substitution G-A INTRON HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3569-S.SNP.3:31963539 chr03:031963539 0 W/31963539-31963539 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.902383;DP=2823;DP4=1391,1334,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.18024e-13;MQSB=0.917771;RPB=0.825544;SGB=51.5091;VDB=0.88485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.3:31965819 chr03:031965819 0 W/31965819-31965819 FN2456 SNP T -> C AC=1;AN=200;BQB=0.972706;DP=4823;DP4=2151,2242,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00041468;MQB=8.44709e-09;MQSB=0.569229;RPB=0.995598;SGB=32.0901;VDB=0.512848;EFF=INTRON(MODIFIER||||341|LOC_Os03g56110|protein_coding|CODING|LOC_Os03g56110.1|3|1),INTRON(MODIFIER||||336|LOC_Os03g56110|protein_coding|CODING|LOC_Os03g56110.2|3|1) FN3540-S.SNP.3:31972004 chr03:031972004 0 W/31972004-31972004 FN3540-S SNP G -> T AC=1;AN=188;BQB=0.755023;DP=2750;DP4=1240,1204,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53635e-11;MQSB=0.990981;RPB=0.538778;SGB=16.3413;VDB=0.427782;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.3:31973448 chr03:031973448 0 W/31973448-31973448 FN961-S Single Base Substitution A-T INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-39.SNP.3:31983854 chr03:031983854 0 W/31983854-31983854 FN-39 Single Base Substitution A-T INTERGENIC Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN3913-S.SNP.3:31984855 chr03:031984855 0 W/31984855-31984855 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.839813;DP=2689;DP4=1186,1430,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.90351e-07;MQSB=0.867309;RPB=0.759514;SGB=60.1755;VDB=0.357394;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.3:31985392 chr03:031985392 0 W/31985392-31985392 FN2606-S SNP T -> C AC=1;AN=198;BQB=0.994841;DP=4341;DP4=1983,2152,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8359e-07;MQSB=0.815036;RPB=0.757704;SGB=18.9639;VDB=0.00598806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.3:31985830 chr03:031985830 0 W/31985830-31985830 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.337587;DP=4680;DP4=2292,2173,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1924e-07;MQSB=0.998701;RPB=0.210582;SGB=45.0543;VDB=0.424843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.3:31989547 chr03:031989547 0 W/31989547-31989547 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.999995;DP=2310;DP4=1164,1080,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79831e-10;MQSB=0.929062;RPB=0.456004;SGB=66.8296;VDB=0.261504;EFF=INTRON(MODIFIER||||385|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.1|3|1),INTRON(MODIFIER||||347|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.2|3|1) FN3934-S.SNP.3:31989547 chr03:031989547 0 W/31989547-31989547 FN3934-S SNP C -> T AC=2;AN=158;BQB=0.654948;DP=2138;DP4=1015,1032,11,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.32664e-14;MQSB=0.989585;RPB=0.800106;SGB=116.978;VDB=0.00855834;EFF=INTRON(MODIFIER||||385|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.1|3|1),INTRON(MODIFIER||||347|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.2|3|1) FN4112-S.SNP.3:31989676 chr03:031989676 0 W/31989676-31989676 FN4112-S SNP T -> A AC=2;AN=182;BQB=0.979091;DP=2476;DP4=1303,1098,9,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.92997e-13;MQSB=0.966494;RPB=0.264613;SGB=84.7091;VDB=0.088711;EFF=INTRON(MODIFIER||||385|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.1|3|1),INTRON(MODIFIER||||347|LOC_Os03g56140|protein_coding|CODING|LOC_Os03g56140.2|3|1) FN4234-S.SNP.3:31994016 chr03:031994016 0 W/31994016-31994016 FN4234-S SNP G -> T AC=1;AN=170;BQB=0.736038;DP=2421;DP4=1230,1122,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.1094e-05;MQSB=0.900923;RPB=0.94852;SGB=12.556;VDB=0.921911;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.3:31995028 chr03:031995028 0 W/31995028-31995028 FN4184-S SNP T -> A AC=1;AN=170;BQB=0.69604;DP=2522;DP4=1071,1362,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39678e-05;MQSB=0.972334;RPB=0.667092;SGB=38.987;VDB=0.465515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.3:32006319 chr03:032006319 0 W/32006319-32006319 FN3809-S SNP C -> T AC=2;AN=190;BQB=0.423043;DP=2749;DP4=1398,1207,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63506e-09;MQSB=0.997238;RPB=0.980559;SGB=41.5369;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.3:32008662 chr03:032008662 0 W/32008662-32008662 FN929-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g56160 lectin-like receptor kinase 7, putative, expressed SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2758-S.SNP.3:32019136 chr03:032019136 0 W/32019136-32019136 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.735449;DP=4709;DP4=2350,2108,23,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.60192e-21;MQSB=0.888673;RPB=0.949695;SGB=76.378;VDB=0.683463;EFF=SPLICE_SITE_REGION(LOW||||121|LOC_Os03g56190|protein_coding|CODING|LOC_Os03g56190.1|4|1),UTR_3_PRIME(MODIFIER||21||121|LOC_Os03g56190|protein_coding|CODING|LOC_Os03g56190.1|4|1) FN-52.SNP.3:32021260 chr03:032021260 0 W/32021260-32021260 FN-52 Single Base Substitution C-T INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN510-S.SNP.3:32029337 chr03:032029337 0 W/32029337-32029337 FN510-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g56220 stress-induced protein, putative, expressed SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN510-S.SNP.3:32029338 chr03:032029338 0 W/32029338-32029338 FN510-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g56220 stress-induced protein, putative, expressed SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3323-S.SNP.3:32033670 chr03:032033670 0 W/32033670-32033670 FN3323-S SNP G -> A AC=1;AN=184;BQB=0.98341;DP=3073;DP4=1466,1466,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.10176e-05;MQSB=0.979515;RPB=0.574792;SGB=39.699;VDB=0.227032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.3:32034330 chr03:032034330 0 W/32034330-32034330 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.367898;DP=3389;DP4=1442,1861,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.55103e-07;MQSB=0.761861;RPB=0.0832789;SGB=46.3132;VDB=0.00394445;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.3:32036328 chr03:032036328 0 W/32036328-32036328 FN1407-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os03g56234 myb/SANT domain protein, putative, expressed SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN960-S.SNP.3:32039567 chr03:032039567 0 W/32039567-32039567 FN960-S Single Base Substitution G-A INTRON HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN680-S.SNP.3:32051650 chr03:032051650 0 W/32051650-32051650 FN680-S Single Base Substitution G-T INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN496-S.SNP.3:32059562 chr03:032059562 0 W/32059562-32059562 FN496-S Single Base Substitution C-T INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN670-S.SNP.3:32059757 chr03:032059757 0 W/32059757-32059757 FN670-S Single Base Substitution G-A INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2318.SNP.3:32063666 chr03:032063666 0 W/32063666-32063666 FN2318 SNP G -> T AC=2;AN=192;BQB=0.473051;DP=4523;DP4=1890,2254,11,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.6625e-14;MQSB=0.613451;RPB=0.906626;SGB=100.374;VDB=0.494923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.3:32065635 chr03:032065635 0 W/32065635-32065635 FN1281-S Single Base Substitution A-T INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN973-S.SNP.3:32068976 chr03:032068976 0 W/32068976-32068976 FN973-S Single Base Substitution G-T SPLICE_SITE_ACCEPTOR HET LOC_Os03g56260 kinesin motor domain containing protein, putative, expressed SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN973-S.SNP.3:32068981 chr03:032068981 0 W/32068981-32068981 FN973-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g56260 kinesin motor domain containing protein, putative, expressed SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN712-S.SNP.3:32071746 chr03:032071746 0 W/32071746-32071746 FN712-S Single Base Substitution T-A INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3779-S.SNP.3:32073112 chr03:032073112 0 W/32073112-32073112 FN3779-S SNP A -> G AC=2;AN=190;BQB=0.930762;DP=1837;DP4=874,798,5,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.4021e-06;MQSB=0.980656;RPB=0.879903;SGB=36.1006;VDB=0.914754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.3:32082567 chr03:032082567 0 W/32082567-32082567 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.436972;DP=4323;DP4=2159,2075,39,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.03502e-31;MQSB=0.999297;RPB=0.605589;SGB=-138.681;VDB=0.2049;EFF=UTR_3_PRIME(MODIFIER||1261||792|LOC_Os03g56270|protein_coding|CODING|LOC_Os03g56270.3|3|1),UTR_3_PRIME(MODIFIER||500||1029|LOC_Os03g56270|protein_coding|CODING|LOC_Os03g56270.1|2|1),INTRON(MODIFIER||||1029|LOC_Os03g56270|protein_coding|CODING|LOC_Os03g56270.2|2|1) FN3698-S.SNP.3:32087442 chr03:032087442 0 W/32087442-32087442 FN3698-S SNP G -> T AC=2;AN=190;BQB=0.626979;DP=2953;DP4=1392,1434,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.75e-14;MQSB=0.991225;RPB=0.87231;SGB=59.414;VDB=0.956204;EFF=SPLICE_SITE_REGION(LOW||||354|LOC_Os03g56280|protein_coding|CODING|LOC_Os03g56280.1|5|1),INTRON(MODIFIER||||354|LOC_Os03g56280|protein_coding|CODING|LOC_Os03g56280.1|5|1) FN424-S.SNP.3:32092242 chr03:032092242 0 W/32092242-32092242 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2671-S.SNP.3:32100151 chr03:032100151 0 W/32100151-32100151 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.947167;DP=5109;DP4=2507,2377,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20714e-11;MQSB=0.616179;RPB=0.81934;SGB=11.0951;VDB=0.835804;EFF=INTRON(MODIFIER||||569|LOC_Os03g56310|protein_coding|CODING|LOC_Os03g56310.1|6|1),INTRON(MODIFIER||||517|LOC_Os03g56310|protein_coding|CODING|LOC_Os03g56310.2|6|1),INTRON(MODIFIER||||533|LOC_Os03g56310|protein_coding|CODING|LOC_Os03g56310.3|6|1),INTRON(MODIFIER||||368|LOC_Os03g56310|protein_coding|CODING|LOC_Os03g56310.4|6|1) FN-363.SNP.3:32102086 chr03:032102086 0 W/32102086-32102086 FN-363 Single Base Substitution T-C INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1176-S.SNP.3:32106991 chr03:032106991 0 W/32106991-32106991 FN1176-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-121.SNP.3:32111876 chr03:032111876 0 W/32111876-32111876 FN-121 Single Base Substitution G-A INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN2386.SNP.3:32113140 chr03:032113140 0 W/32113140-32113140 FN2386 SNP C -> A AC=1;AN=192;BQB=0.538798;DP=4439;DP4=2288,1825,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.04137e-13;MQSB=0.881276;RPB=0.620543;SGB=18.3052;VDB=0.0250472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.3:32118392 chr03:032118392 0 W/32118392-32118392 FN3740-S SNP C -> T AC=1;AN=190;BQB=0.888409;DP=2731;DP4=1415,1236,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.87594e-07;MQSB=0.904386;RPB=0.301921;SGB=44.5415;VDB=0.815111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.3:32121454 chr03:032121454 0 W/32121454-32121454 FN2638-S SNP T -> A AC=1;AN=200;BQB=0.997299;DP=4577;DP4=2104,2214,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.30795e-06;MQSB=0.79746;RPB=0.739468;SGB=29.4541;VDB=0.0961185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K611N|895|LOC_Os03g56360|protein_coding|CODING|LOC_Os03g56360.1|12|1) FN4178-S.SNP.3:32131494 chr03:032131494 0 W/32131494-32131494 FN4178-S SNP T -> A AC=2;AN=170;BQB=0.841199;DP=2304;DP4=1082,1133,18,12;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.24988e-12;MQSB=0.0315744;RPB=0.981286;SGB=127.84;VDB=0.303927;EFF=INTRON(MODIFIER||||895|LOC_Os03g56360|protein_coding|CODING|LOC_Os03g56360.1|1|1) FN437-S.SNP.3:32148525 chr03:032148525 0 W/32148525-32148525 FN437-S Single Base Substitution G-T INTRON HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN707-S.SNP.3:32151485 chr03:032151485 0 W/32151485-32151485 FN707-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g56400 pentatricopeptide, putative, expressed SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2648-S.SNP.3:32151790 chr03:032151790 0 W/32151790-32151790 FN2648-S SNP G -> C AC=1;AN=200;BQB=0.907631;DP=4815;DP4=2366,2135,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.45238e-14;MQSB=0.682479;RPB=0.99889;SGB=95.7111;VDB=0.342824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L525V|804|LOC_Os03g56400|protein_coding|CODING|LOC_Os03g56400.1|1|1) FN2789-S.SNP.3:32158976 chr03:032158976 0 W/32158976-32158976 FN2789-S SNP G -> A AC=1;AN=198;BQB=0.470184;DP=4458;DP4=2280,1816,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000448632;MQB=2.03573e-05;MQSB=0.999379;RPB=0.870292;SGB=-0.221312;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.3:32164369 chr03:032164369 0 W/32164369-32164369 FN4023-S SNP T -> C AC=2;AN=168;BQB=0.917356;DP=2566;DP4=1306,1131,15,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.3458e-14;MQSB=0.960561;RPB=0.696976;SGB=-13.6493;VDB=0.509735;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.3:32169790 chr03:032169790 0 W/32169790-32169790 FN4188-S SNP G -> C AC=1;AN=170;BQB=0.859547;DP=2674;DP4=1572,1015,17,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.50054e-16;MQSB=0.913011;RPB=0.723638;SGB=114.512;VDB=0.873415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aGg|T140R|339|LOC_Os03g56440|protein_coding|CODING|LOC_Os03g56440.1|1|1) FN3821-S.SNP.3:32170943 chr03:032170943 0 W/32170943-32170943 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.37109;DP=3391;DP4=1861,1404,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.81949e-09;MQSB=0.672788;RPB=0.856295;SGB=108.296;VDB=0.463977;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V140|467|LOC_Os03g56450|protein_coding|CODING|LOC_Os03g56450.1|1|1) FN-173.SNP.3:32172384 chr03:032172384 0 W/32172384-32172384 FN-173 Single Base Substitution A-G INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN-13.SNP.3:32183255 chr03:032183255 0 W/32183255-32183255 FN-13 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g56470 protein kinase family protein, putative, expressed SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.3:32183255 chr03:032183255 0 W/32183255-32183255 FN-13 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os03g56470 protein kinase family protein, putative, expressed SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.3:32183256 chr03:032183256 0 W/32183256-32183256 FN-13 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.3:32183256 chr03:032183256 0 W/32183256-32183256 FN-13 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN3718-S.SNP.3:32185938 chr03:032185938 0 W/32185938-32185938 FN3718-S SNP G -> C AC=1;AN=190;BQB=0.997621;DP=2882;DP4=1327,1441,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.16179e-07;MQSB=0.886633;RPB=0.923886;SGB=49.0954;VDB=0.820586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.3:32192854 chr03:032192854 0 W/32192854-32192854 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.273367;DP=2237;DP4=1178,976,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000702169;MQSB=0.0181245;RPB=0.996821;SGB=51.4366;VDB=0.498311;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.3:32195115 chr03:032195115 0 W/32195115-32195115 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2489.SNP.3:32206970 chr03:032206970 0 W/32206970-32206970 FN2489 SNP G -> T AC=1;AN=200;BQB=0.748704;DP=4344;DP4=2143,1861,12,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000230203;MQB=2.52418e-10;MQSB=2.04664e-07;RPB=0.954452;SGB=61.9006;VDB=0.135364;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1394|LOC_Os03g56530|protein_coding|CODING|LOC_Os03g56530.1|8|1),INTRON(MODIFIER||||1394|LOC_Os03g56530|protein_coding|CODING|LOC_Os03g56530.1|7|1);LOF=(LOC_Os03g56530|LOC_Os03g56530|1|1.00) FN488-S.SNP.3:32214388 chr03:032214388 0 W/32214388-32214388 FN488-S Single Base Substitution A-G INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2098-S.SNP.3:32216849 chr03:032216849 0 W/32216849-32216849 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.494223;DP=4178;DP4=2243,1877,15,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.27721e-07;MQSB=0.844061;RPB=0.105688;SGB=-115.779;VDB=0.0840004;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.3:32246059 chr03:032246059 0 W/32246059-32246059 W278-3-1 Single Base Substitution C-A INTRON HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1458-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN1458-S Single Base Substitution G-C INTRON HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2436.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN2436 SNP G -> C AC=1;AN=200;BQB=0.924725;DP=3516;DP4=2001,1359,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.25345e-07;MQSB=0.779727;RPB=0.851888;SGB=58.8698;VDB=0.96723;EFF=INTRON(MODIFIER||||373|LOC_Os03g56620|protein_coding|CODING|LOC_Os03g56620.1|1|1) FN2561-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN2561-S SNP G -> C AC=2;AN=198;BQB=0.985577;DP=3656;DP4=1816,1674,8,4;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.3675e-07;MQSB=0.959994;RPB=0.706016;SGB=49.5489;VDB=0.867141;EFF=INTRON(MODIFIER||||373|LOC_Os03g56620|protein_coding|CODING|LOC_Os03g56620.1|1|1) FN3293-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN3293-S SNP G -> C AC=1;AN=184;BQB=0.863553;DP=2045;DP4=1121,855,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.00729e-08;MQSB=0.846067;RPB=0.944297;SGB=62.3078;VDB=0.522856;EFF=INTRON(MODIFIER||||373|LOC_Os03g56620|protein_coding|CODING|LOC_Os03g56620.1|1|1) FN3676-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN3676-S SNP G -> C AC=2;AN=190;BQB=0.904958;DP=2146;DP4=1178,873,12,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.53678e-12;MQSB=0.704565;RPB=0.998027;SGB=57.4238;VDB=0.384099;EFF=INTRON(MODIFIER||||373|LOC_Os03g56620|protein_coding|CODING|LOC_Os03g56620.1|1|1) FN3851-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN3851-S SNP G -> C AC=2;AN=158;BQB=0.808951;DP=1802;DP4=947,791,8,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.33079e-13;MQSB=0.68858;RPB=0.993162;SGB=64.3985;VDB=0.970792;EFF=INTRON(MODIFIER||||373|LOC_Os03g56620|protein_coding|CODING|LOC_Os03g56620.1|1|1) FN389-S.SNP.3:32249801 chr03:032249801 0 W/32249801-32249801 FN389-S Single Base Substitution G-C INTRON HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-192.SNP.3:32255461 chr03:032255461 0 W/32255461-32255461 FN-192 Single Base Substitution T-C INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1325-S.SNP.3:32255701 chr03:032255701 0 W/32255701-32255701 FN1325-S Single Base Substitution A-G INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3711-S.SNP.3:32256112 chr03:032256112 0 W/32256112-32256112 FN3711-S SNP A -> T AC=1;AN=190;BQB=0.996947;DP=3112;DP4=1412,1584,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99231e-11;MQSB=0.990387;RPB=0.658415;SGB=60.9777;VDB=0.748227;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.3:32264530 chr03:032264530 0 W/32264530-32264530 FN681-S Single Base Substitution T-C INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN930-S.SNP.3:32278313 chr03:032278313 0 W/32278313-32278313 FN930-S Single Base Substitution C-G INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1232-S.SNP.3:32278343 chr03:032278343 0 W/32278343-32278343 FN1232-S Single Base Substitution A-G INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3981-S.SNP.3:32283361 chr03:032283361 0 W/32283361-32283361 FN3981-S SNP T -> G AC=1;AN=168;BQB=0.983753;DP=2824;DP4=1495,1247,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=10;MQ0F=0.636686;MQB=0.000172933;MQSB=0.0047181;RPB=0.999586;SGB=61.0344;VDB=0.261829;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.3:32289041 chr03:032289041 0 W/32289041-32289041 FN4258-S SNP G -> A AC=1;AN=170;BQB=0.639843;DP=2524;DP4=1078,1368,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.10453e-07;MQSB=0.440571;RPB=0.62676;SGB=-15.219;VDB=0.22938;EFF=INTRON(MODIFIER||||81|LOC_Os03g56682|protein_coding|CODING|LOC_Os03g56682.1|1|1) FN_N1-151-7.SNP.3:32295029 chr03:032295029 0 W/32295029-32295029 FN_N1-151-7 Single Base Substitution A-G HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2533-S.SNP.3:32296529 chr03:032296529 0 W/32296529-32296529 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.473099;DP=4368;DP4=1869,2253,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.94857e-06;MQSB=0.955785;RPB=0.960401;SGB=-17.4065;VDB=0.838691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.3:32296860 chr03:032296860 0 W/32296860-32296860 FN2181-S SNP G -> T AC=1;AN=190;BQB=0.495507;DP=4387;DP4=2133,1942,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03161e-11;MQSB=0.951388;RPB=0.998227;SGB=90.0802;VDB=0.0143794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.3:32300670 chr03:032300670 0 W/32300670-32300670 FN1037-S Single Base Substitution C-T INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2372.SNP.3:32307323 chr03:032307323 0 W/32307323-32307323 FN2372 SNP G -> A AC=1;AN=192;BQB=0.55205;DP=4646;DP4=2133,2193,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.12683e-08;MQSB=0.0613758;RPB=0.805452;SGB=90.2896;VDB=0.957276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A71T|241|LOC_Os03g56700|protein_coding|CODING|LOC_Os03g56700.1|1|1) FN2407.SNP.3:32309582 chr03:032309582 0 W/32309582-32309582 FN2407 SNP C -> T AC=1;AN=200;BQB=0.956701;DP=3971;DP4=2134,1612,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25594e-12;MQSB=0.0527513;RPB=0.548146;SGB=47.7211;VDB=0.547187;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.3:32311827 chr03:032311827 0 W/32311827-32311827 FN3535-S SNP C -> T AC=2;AN=188;BQB=0.749259;DP=4114;DP4=2061,1932,15,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.58455e-14;MQSB=0.863068;RPB=0.806691;SGB=82.0471;VDB=0.303086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.3:32312070 chr03:032312070 0 W/32312070-32312070 FN2174-S SNP G -> A AC=2;AN=168;BQB=0.239961;DP=1135;DP4=537,558,6,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.00140537;MQSB=0.670742;RPB=0.958424;SGB=-1.53256;VDB=0.666096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.3:32312070 chr03:032312070 0 W/32312070-32312070 FN2290 SNP G -> A AC=2;AN=192;BQB=0.167177;DP=4440;DP4=2328,1732,32,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.10691e-25;MQSB=0.00108819;RPB=0.822296;SGB=139.181;VDB=0.936617;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.3:32312070 chr03:032312070 0 W/32312070-32312070 FN4206-S SNP G -> A AC=2;AN=170;BQB=0.710387;DP=2179;DP4=1182,925,15,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.38931e-10;MQSB=0.999835;RPB=0.899314;SGB=96.7413;VDB=0.646607;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.3:32317252 chr03:032317252 0 W/32317252-32317252 FN3663-S SNP A -> T AC=1;AN=190;BQB=0.69747;DP=2725;DP4=1166,1474,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.46834e-07;MQSB=0.73147;RPB=0.966583;SGB=44.5415;VDB=0.629918;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.3:32333342 chr03:032333342 0 W/32333342-32333342 FN1345-S Single Base Substitution C-T INTRON HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3935-S.SNP.3:32334116 chr03:032334116 0 W/32334116-32334116 FN3935-S SNP G -> A AC=1;AN=158;BQB=0.983966;DP=2588;DP4=1367,1111,14,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.67724e-12;MQSB=0.997225;RPB=0.477048;SGB=35.6659;VDB=0.0192359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P89L|488|LOC_Os03g56740|protein_coding|CODING|LOC_Os03g56740.1|4|1) FN3780-S.SNP.3:32335134 chr03:032335134 0 W/32335134-32335134 FN3780-S SNP G -> A AC=1;AN=190;BQB=0.651432;DP=2864;DP4=1319,1466,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08201e-05;MQSB=0.862005;RPB=0.930733;SGB=21.8853;VDB=0.525142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.3:32336497 chr03:032336497 0 W/32336497-32336497 FN2646-S SNP T -> C AC=1;AN=200;BQB=0.400123;DP=4893;DP4=2517,2183,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46546e-13;MQSB=0.927938;RPB=0.0122198;SGB=45.1159;VDB=0.0253419;EFF=INTRON(MODIFIER||||122|LOC_Os03g56750|protein_coding|CODING|LOC_Os03g56750.1|1|1) FN1205-S.SNP.3:32338465 chr03:032338465 0 W/32338465-32338465 FN1205-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN4068-S.SNP.3:32341121 chr03:032341121 0 W/32341121-32341121 FN4068-S SNP T -> A AC=1;AN=182;BQB=0.808183;DP=2597;DP4=1528,1019,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14228e-05;MQSB=0.936634;RPB=0.996608;SGB=48.6223;VDB=0.614492;EFF=INTRON(MODIFIER||||348|LOC_Os03g56770|protein_coding|CODING|LOC_Os03g56770.1|1|1) FN-93.SNP.3:32346146 chr03:032346146 0 W/32346146-32346146 FN-93 Single Base Substitution T-A INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3849-S.SNP.3:32350098 chr03:032350098 0 W/32350098-32350098 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.999996;DP=2271;DP4=1076,1101,7,17;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.011889;MQB=1.26401e-07;MQSB=0.0511225;RPB=0.497757;SGB=99.5005;VDB=0.109633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.3:32350643 chr03:032350643 0 W/32350643-32350643 FN2472 SNP T -> C AC=2;AN=200;BQB=0.787671;DP=3107;DP4=1203,1316,17,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.79027e-14;MQSB=0.365539;RPB=0.689205;SGB=78.9831;VDB=0.708426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.3:32356305 chr03:032356305 0 W/32356305-32356305 FN3877-S SNP T -> A AC=1;AN=158;BQB=0.939328;DP=2490;DP4=1108,1306,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.94945e-12;MQSB=0.999893;RPB=0.99787;SGB=61.029;VDB=0.0461457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.3:32356306 chr03:032356306 0 W/32356306-32356306 FN3877-S SNP C -> A AC=1;AN=158;BQB=0.999954;DP=2490;DP4=1109,1299,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.13238e-13;MQSB=0.999295;RPB=0.979943;SGB=82.0227;VDB=0.0511906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.3:32356848 chr03:032356848 0 W/32356848-32356848 FN3925-S SNP T -> A AC=1;AN=158;BQB=0.977929;DP=2344;DP4=1160,1080,9,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.14879e-14;MQSB=0.99623;RPB=0.909934;SGB=71.1374;VDB=0.238507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1316-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN1316-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1402-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN1402-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1471-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN1471-S SNP C -> T AC=1;AN=188;BQB=0.0236579;DP=3313;DP4=1818,1431,19,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.49479e-08;MQSB=0.999662;RPB=0.195354;SGB=-184.54;VDB=0.230031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN1531-S Single Base Substitution C-T INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2316.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN2316 SNP C -> T AC=2;AN=192;BQB=0.603951;DP=4948;DP4=2237,2014,40,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.2237e-23;MQSB=0.500378;RPB=0.12559;SGB=-299.426;VDB=0.170365;EFF=INTERGENIC(MODIFIER||||||||||1) FN4017-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.998588;DP=2479;DP4=1360,975,11,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.11244e-07;MQSB=0.997076;RPB=0.716157;SGB=38.1788;VDB=0.705322;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN4275-S SNP C -> T AC=1;AN=170;BQB=0.943766;DP=2268;DP4=1188,991,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.5063e-06;MQSB=0.975898;RPB=0.4076;SGB=34.5445;VDB=0.23154;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN473-S Single Base Substitution C-T INTERGENIC HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN894-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN894-S Single Base Substitution C-T INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN978-S.SNP.3:32364484 chr03:032364484 0 W/32364484-32364484 FN978-S Single Base Substitution C-T INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4151-S.SNP.3:32364516 chr03:032364516 0 W/32364516-32364516 FN4151-S SNP A -> T AC=1;AN=170;BQB=0.92062;DP=2140;DP4=1139,930,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86643e-06;MQSB=0.995438;RPB=0.916426;SGB=27.9928;VDB=0.32632;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.3:32365244 chr03:032365244 0 W/32365244-32365244 FN_807-3-1 Single Base Substitution C-A HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2564-S.SNP.3:32367271 chr03:032367271 0 W/32367271-32367271 FN2564-S SNP G -> A AC=1;AN=198;BQB=0.16965;DP=4159;DP4=2034,1879,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000268099;MQSB=0.920674;RPB=0.923859;SGB=18.5788;VDB=0.578041;EFF=INTRON(MODIFIER||||501|LOC_Os03g56800|protein_coding|CODING|LOC_Os03g56800.1|1|1),INTRON(MODIFIER||||492|LOC_Os03g56800|protein_coding|CODING|LOC_Os03g56800.2|1|1) FN2295.SNP.3:32372026 chr03:032372026 0 W/32372026-32372026 FN2295 SNP C -> T AC=1;AN=192;BQB=0.587027;DP=4465;DP4=2094,2076,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.58637e-16;MQSB=0.837342;RPB=0.999918;SGB=122.24;VDB=0.792742;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y51|444|LOC_Os03g56810|protein_coding|CODING|LOC_Os03g56810.1|1|1) FN3657-S.SNP.3:32375430 chr03:032375430 0 W/32375430-32375430 FN3657-S SNP G -> A AC=2;AN=190;BQB=0.978704;DP=3301;DP4=1511,1637,18,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.02504e-25;MQSB=0.979014;RPB=0.808945;SGB=172.05;VDB=0.250524;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.3:32375431 chr03:032375431 0 W/32375431-32375431 FN3657-S SNP G -> T AC=2;AN=190;BQB=0.990339;DP=3297;DP4=1497,1612,18,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.30377e-25;MQSB=0.995652;RPB=0.79135;SGB=172.05;VDB=0.238639;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.3:32377468 chr03:032377468 0 W/32377468-32377468 FN-344 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g56820 fatty acid hydroxylase, putative, expressed SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2589-S.SNP.3:32378327 chr03:032378327 0 W/32378327-32378327 FN2589-S SNP T -> C AC=1;AN=198;BQB=0.552885;DP=4644;DP4=2140,2231,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.35819e-10;MQSB=0.998071;RPB=0.827065;SGB=43.7442;VDB=0.58417;EFF=UTR_3_PRIME(MODIFIER||159||250|LOC_Os03g56820|protein_coding|CODING|LOC_Os03g56820.1|6|1),UTR_3_PRIME(MODIFIER||159||237|LOC_Os03g56820|protein_coding|CODING|LOC_Os03g56820.3|7|1),UTR_3_PRIME(MODIFIER||159||237|LOC_Os03g56820|protein_coding|CODING|LOC_Os03g56820.2|7|1) FN_769-4-1.SNP.3:32380754 chr03:032380754 0 W/32380754-32380754 FN_769-4-1 Single Base Substitution C-T Homo LOC_Os03g56830 ad-003, putative, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2765-S.SNP.3:32387051 chr03:032387051 0 W/32387051-32387051 FN2765-S SNP A -> C AC=2;AN=198;BQB=0.952826;DP=4309;DP4=2235,1919,12,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.51955e-16;MQSB=0.906127;RPB=0.992323;SGB=123.071;VDB=0.908002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L153R|431|LOC_Os03g56840|protein_coding|CODING|LOC_Os03g56840.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L153R|421|LOC_Os03g56840|protein_coding|CODING|LOC_Os03g56840.2|3|1) FN3110-S.SNP.3:32392966 chr03:032392966 0 W/32392966-32392966 FN3110-S SNP T -> A AC=1;AN=184;BQB=0.864332;DP=2700;DP4=1257,1312,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.249e-12;MQSB=0.814591;RPB=0.636892;SGB=38.4058;VDB=0.631023;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.3:32396392 chr03:032396392 0 W/32396392-32396392 FN1624-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os03g56869 ribose-5-phosphate isomerase A, putative, expressed SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2622-S.SNP.3:32401237 chr03:032401237 0 W/32401237-32401237 FN2622-S SNP C -> A AC=1;AN=200;BQB=0.732949;DP=4408;DP4=2264,1857,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85003e-17;MQSB=0.853432;RPB=0.818214;SGB=97.9523;VDB=0.972993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.3:32409196 chr03:032409196 0 W/32409196-32409196 FN3110-S SNP A -> T AC=1;AN=184;BQB=0.993547;DP=3154;DP4=1409,1620,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35311e-12;MQSB=0.994601;RPB=0.98178;SGB=84.9167;VDB=0.332701;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.3:32415503 chr03:032415503 0 W/32415503-32415503 FN-202 Single Base Substitution T-C INTERGENIC HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2422.SNP.3:32418914 chr03:032418914 0 W/32418914-32418914 FN2422 SNP C -> T AC=1;AN=200;BQB=0.347285;DP=4531;DP4=1977,2341,5,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.08831e-05;MQSB=0.308833;RPB=0.312072;SGB=29.4541;VDB=0.505957;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R485H|678|LOC_Os03g56920|protein_coding|CODING|LOC_Os03g56920.1|2|1) FN1131-S.SNP.3:32429162 chr03:032429162 0 W/32429162-32429162 FN1131-S Single Base Substitution G-A INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN3452-S.SNP.3:32430134 chr03:032430134 0 W/32430134-32430134 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.57295;DP=2826;DP4=1393,1352,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000177002;MQSB=0.98928;RPB=0.607339;SGB=25.1826;VDB=0.972931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.3:32437785 chr03:032437785 0 W/32437785-32437785 FN1319-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1319-S.SNP.3:32437789 chr03:032437789 0 W/32437789-32437789 FN1319-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2216-S.SNP.3:32440463 chr03:032440463 0 W/32440463-32440463 FN2216-S SNP G -> C AC=1;AN=190;BQB=0.107949;DP=5028;DP4=2190,2485,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=0.00116903;MQSB=4.36812e-12;RPB=0.513101;SGB=-14.3297;VDB=0.707026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.3:32441579 chr03:032441579 0 W/32441579-32441579 FN2612-S SNP A -> G AC=1;AN=198;BQB=0.588888;DP=4145;DP4=1842,2064,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.92461e-05;MQSB=0.389842;RPB=0.204689;SGB=9.3494;VDB=0.0776678;EFF=INTRON(MODIFIER||||615|LOC_Os03g56960|protein_coding|CODING|LOC_Os03g56960.1|2|1) FN795-S.SNP.3:32445878 chr03:032445878 0 W/32445878-32445878 FN795-S Single Base Substitution T-C INTRON HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2789-S.SNP.3:32449993 chr03:032449993 0 W/32449993-32449993 FN2789-S SNP C -> T AC=2;AN=198;BQB=0.990349;DP=4012;DP4=1922,1786,19,20;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=1.04782e-15;MQSB=0.962801;RPB=0.164346;SGB=86.437;VDB=0.146802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.3:32452152 chr03:032452152 0 W/32452152-32452152 FN3814-S SNP C -> T AC=1;AN=190;BQB=0.994556;DP=2858;DP4=1572,1149,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68591e-06;MQSB=0.663652;RPB=0.925736;SGB=49.0954;VDB=0.274834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.3:32460462 chr03:032460462 0 W/32460462-32460462 FN2192-S SNP C -> T AC=2;AN=190;BQB=0.278785;DP=5024;DP4=2432,2254,20,20;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.02421e-11;MQSB=2.75501e-06;RPB=0.97136;SGB=132.055;VDB=0.311309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.3:32475948 chr03:032475948 0 W/32475948-32475948 FN1213-S Single Base Substitution G-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN491-S.SNP.3:32480655 chr03:032480655 0 W/32480655-32480655 FN491-S Single Base Substitution G-T INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2192-S.SNP.3:32481753 chr03:032481753 0 W/32481753-32481753 FN2192-S SNP T -> A AC=2;AN=190;BQB=0.927399;DP=4463;DP4=1488,2388,19,15;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.00268877;MQB=0.00492065;MQSB=0.702597;RPB=0.895766;SGB=110.732;VDB=0.496751;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.3:32482479 chr03:032482479 0 W/32482479-32482479 FN490-S Single Base Substitution G-A INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN2664-S.SNP.3:32486708 chr03:032486708 0 W/32486708-32486708 FN2664-S SNP T -> C AC=2;AN=200;BQB=0.568496;DP=4689;DP4=2278,2108,39,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08702e-34;MQSB=0.677828;RPB=0.99362;SGB=220.528;VDB=0.962567;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.3:32490353 chr03:032490353 0 W/32490353-32490353 FN1384-S Single Base Substitution G-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN_N1-213-1.SNP.3:32490694 chr03:032490694 0 W/32490694-32490694 FN_N1-213-1 Single Base Substitution G-T Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2614-S.SNP.3:32492419 chr03:032492419 0 W/32492419-32492419 FN2614-S SNP C -> T AC=1;AN=198;BQB=0.938302;DP=3919;DP4=2391,1213,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000510334;MQB=1.08242e-06;MQSB=0.101527;RPB=0.891995;SGB=29.3637;VDB=0.605455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.3:32493392 chr03:032493392 0 W/32493392-32493392 FN1585-S Single Base Substitution C-G INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-190.SNP.3:32495515 chr03:032495515 0 W/32495515-32495515 FN-190 Single Base Substitution G-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3818-S.SNP.3:32496904 chr03:032496904 0 W/32496904-32496904 FN3818-S SNP G -> T AC=2;AN=190;BQB=0.989747;DP=2490;DP4=1186,1184,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.54383e-18;MQSB=0.980817;RPB=0.674566;SGB=140.173;VDB=0.67287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.3:32501221 chr03:032501221 0 W/32501221-32501221 FN2675-S SNP C -> T AC=1;AN=200;BQB=0.4662;DP=6086;DP4=2437,3243,13,16;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00607953;MQB=1.8619e-07;MQSB=0;RPB=0.998142;SGB=94.3471;VDB=0.429639;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.3:32505176 chr03:032505176 0 W/32505176-32505176 FN-285 Single Base Substitution A-G INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3450-S.SNP.3:32505176 chr03:032505176 0 W/32505176-32505176 FN3450-S SNP A -> G AC=1;AN=184;BQB=0.98909;DP=2987;DP4=1476,1425,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70406e-05;MQSB=0.975418;RPB=0.777998;SGB=39.699;VDB=0.0293045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.3:32509034 chr03:032509034 0 W/32509034-32509034 FN1273-S Single Base Substitution A-C INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN3424-S.SNP.3:32509759 chr03:032509759 0 W/32509759-32509759 FN3424-S SNP A -> G AC=1;AN=184;BQB=0.677775;DP=2954;DP4=1631,1142,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.95893e-06;MQSB=0.894347;RPB=0.831026;SGB=18.2315;VDB=0.0369954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.3:32517060 chr03:032517060 0 W/32517060-32517060 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.999712;DP=3129;DP4=1416,1587,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4588e-09;MQSB=0.923058;RPB=0.418168;SGB=50.3161;VDB=0.0832773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.3:32517871 chr03:032517871 0 W/32517871-32517871 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.799189;DP=2754;DP4=1264,1325,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=9.87523e-13;MQSB=0.0140726;RPB=0.910939;SGB=34.3388;VDB=0.851358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.3:32517872 chr03:032517872 0 W/32517872-32517872 FN3964-S SNP A -> T AC=1;AN=168;BQB=0.957705;DP=2764;DP4=1286,1345,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=3.71327e-13;MQSB=0.0472331;RPB=0.989533;SGB=87.6193;VDB=0.914253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.3:32518008 chr03:032518008 0 W/32518008-32518008 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.99968;DP=4193;DP4=2280,1689,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.5412e-13;MQSB=0.0332374;RPB=0.625346;SGB=97.671;VDB=0.272161;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.3:32520630 chr03:032520630 0 W/32520630-32520630 FN-81 Single Base Substitution T-A INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN4208-S.SNP.3:32523406 chr03:032523406 0 W/32523406-32523406 FN4208-S SNP G -> C AC=1;AN=170;BQB=0.901837;DP=2650;DP4=932,1630,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.67787e-08;MQSB=0.631974;RPB=0.271714;SGB=34.878;VDB=0.425465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.3:32529246 chr03:032529246 0 W/32529246-32529246 FN2431 SNP A -> G AC=1;AN=200;BQB=0.833433;DP=5321;DP4=2511,2260,10,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0127796;MQB=1.43344e-07;MQSB=1.22508e-11;RPB=0.587852;SGB=-37.2897;VDB=0.242183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.3:32544544 chr03:032544544 0 W/32544544-32544544 FN3657-S SNP G -> A AC=2;AN=190;BQB=0.271322;DP=2512;DP4=1090,1331,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.06553e-09;MQSB=0.996334;RPB=0.998501;SGB=99.1879;VDB=0.658928;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.3:32551111 chr03:032551111 0 W/32551111-32551111 FN4161-S SNP T -> C AC=1;AN=170;BQB=0.990687;DP=2457;DP4=1187,1185,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16986e-08;MQSB=0.997981;RPB=0.95003;SGB=22.3266;VDB=0.827271;EFF=UTR_3_PRIME(MODIFIER||228||238|LOC_Os03g57090|protein_coding|CODING|LOC_Os03g57090.1|10|1) FN3360-S.SNP.3:32555912 chr03:032555912 0 W/32555912-32555912 FN3360-S SNP A -> G AC=1;AN=184;BQB=0.874829;DP=2582;DP4=1223,1284,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000225125;MQSB=0.985552;RPB=0.840103;SGB=30.6558;VDB=0.691871;EFF=INTRON(MODIFIER||||350|LOC_Os03g57100|protein_coding|CODING|LOC_Os03g57100.1|3|1) FN2583-S.SNP.3:32561407 chr03:032561407 0 W/32561407-32561407 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.986418;DP=4927;DP4=2201,2545,10,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.84545e-17;MQSB=0.861495;RPB=0.993717;SGB=94.3471;VDB=0.778964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L719P|757|LOC_Os03g57110|protein_coding|CODING|LOC_Os03g57110.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L719P|757|LOC_Os03g57110|protein_coding|CODING|LOC_Os03g57110.2|4|1) FN2281.SNP.3:32572146 chr03:032572146 0 W/32572146-32572146 FN2281 SNP A -> G AC=1;AN=192;BQB=0.945671;DP=5030;DP4=2612,2190,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.10096e-17;MQSB=0.973276;RPB=0.700419;SGB=62.2505;VDB=0.308514;EFF=INTRON(MODIFIER||||330|LOC_Os03g57130|protein_coding|CODING|LOC_Os03g57130.1|5|1) FN1596-S.SNP.3:32574595 chr03:032574595 0 W/32574595-32574595 FN1596-S Single Base Substitution G-A INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1596-S.SNP.3:32574604 chr03:032574604 0 W/32574604-32574604 FN1596-S Single Base Substitution T-A INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1545-S.SNP.3:32576356 chr03:032576356 0 W/32576356-32576356 FN1545-S Single Base Substitution T-G INTERGENIC Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN3637-S.SNP.3:32580316 chr03:032580316 0 W/32580316-32580316 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.997407;DP=2818;DP4=1316,1310,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00102502;MQSB=0.36581;RPB=0.610183;SGB=53.6492;VDB=0.635306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.3:32587270 chr03:032587270 0 W/32587270-32587270 FN2226-S SNP G -> A AC=1;AN=190;BQB=0.974902;DP=4227;DP4=1617,2338,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000236574;MQB=3.11799e-07;MQSB=0.709632;RPB=0.780331;SGB=39.6545;VDB=0.771171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.3:32589428 chr03:032589428 0 W/32589428-32589428 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.862864;DP=4246;DP4=2029,2028,12,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.21239e-10;MQSB=0.991326;RPB=0.636584;SGB=29.3443;VDB=0.61789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.3:32589559 chr03:032589559 0 W/32589559-32589559 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.106549;DP=4938;DP4=2109,2597,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.37255e-13;MQSB=0.995368;RPB=0.9765;SGB=83.5316;VDB=0.270287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.3:32593495 chr03:032593495 0 W/32593495-32593495 FN2136-S SNP T -> C AC=2;AN=168;BQB=0.815636;DP=3547;DP4=1725,1748,27,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.09679e-24;MQSB=0.999994;RPB=0.995823;SGB=-1.15556;VDB=0.831991;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V735|943|LOC_Os03g57160|protein_coding|CODING|LOC_Os03g57160.1|5|1) W591-4-1.SNP.3:32612771 chr03:032612771 0 W/32612771-32612771 W591-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1302-S.SNP.3:32615958 chr03:032615958 0 W/32615958-32615958 FN1302-S Single Base Substitution A-G INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN4204-S.SNP.3:32621306 chr03:032621306 0 W/32621306-32621306 FN4204-S SNP C -> G AC=1;AN=170;BQB=0.882832;DP=2497;DP4=1298,1071,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.25735e-07;MQSB=0.994862;RPB=0.872262;SGB=38.3207;VDB=0.818853;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.3:32627315 chr03:032627315 0 W/32627315-32627315 FN1057-S Single Base Substitution C-T INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1271-S.SNP.3:32645884 chr03:032645884 0 W/32645884-32645884 FN1271-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2701-S.SNP.3:32647310 chr03:032647310 0 W/32647310-32647310 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.28108;DP=5107;DP4=2510,2256,23,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.51945e-20;MQSB=0.396743;RPB=0.524734;SGB=130.399;VDB=0.719577;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.3:32649002 chr03:032649002 0 W/32649002-32649002 FN1221-S Single Base Substitution C-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3437-S.SNP.3:32652542 chr03:032652542 0 W/32652542-32652542 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.726408;DP=2615;DP4=1436,1105,15,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46447e-09;MQSB=0.880869;RPB=0.34179;SGB=56.8786;VDB=0.278044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.3:32653015 chr03:032653015 0 W/32653015-32653015 FN2167-S SNP T -> C AC=1;AN=168;BQB=0.849833;DP=3830;DP4=1892,1888,9,19;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000261097;MQB=0.000115019;MQSB=9.03468e-05;RPB=0.939771;SGB=-43.4892;VDB=0.972839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.3:32665421 chr03:032665421 0 W/32665421-32665421 FN3558-S SNP C -> G AC=2;AN=188;BQB=0.95965;DP=2648;DP4=1323,1248,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.45458e-16;MQSB=0.98888;RPB=0.690413;SGB=121.672;VDB=0.27407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.3:32672322 chr03:032672322 0 W/32672322-32672322 FN3934-S SNP T -> G AC=2;AN=158;BQB=0.056789;DP=2447;DP4=1134,842,14,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.00393e-06;MQSB=0.449136;RPB=0.9988;SGB=-43.5761;VDB=0.252651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Gcc|S47A|836|LOC_Os03g57290|protein_coding|CODING|LOC_Os03g57290.1|1|1) FN3606-S.SNP.3:32673303 chr03:032673303 0 W/32673303-32673303 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.933735;DP=2844;DP4=1432,1316,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.90371e-08;MQSB=0.98751;RPB=0.958549;SGB=15.9981;VDB=0.317885;EFF=INTRON(MODIFIER||||836|LOC_Os03g57290|protein_coding|CODING|LOC_Os03g57290.1|1|1) FN3606-S.SNP.3:32673305 chr03:032673305 0 W/32673305-32673305 FN3606-S SNP C -> A AC=1;AN=190;BQB=0.997635;DP=2843;DP4=1438,1311,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14756e-07;MQSB=0.996529;RPB=0.781435;SGB=28.9929;VDB=0.282858;EFF=INTRON(MODIFIER||||836|LOC_Os03g57290|protein_coding|CODING|LOC_Os03g57290.1|1|1) FN3673-S.SNP.3:32676935 chr03:032676935 0 W/32676935-32676935 FN3673-S SNP T -> C AC=1;AN=190;BQB=0.978981;DP=2881;DP4=1548,1220,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.61157e-06;MQSB=0.949981;RPB=0.998216;SGB=35.4339;VDB=0.462804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I574T|836|LOC_Os03g57290|protein_coding|CODING|LOC_Os03g57290.1|10|1) FN-77.SNP.3:32680788 chr03:032680788 0 W/32680788-32680788 FN-77 Single Base Substitution A-T INTRON HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN2429.SNP.3:32684644 chr03:032684644 0 W/32684644-32684644 FN2429 SNP G -> A AC=2;AN=200;BQB=0.99945;DP=4941;DP4=2203,2478,27,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.47584e-37;MQSB=0.984315;RPB=0.725598;SGB=76.9071;VDB=0.38151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D580N|1259|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.1|16|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D580N|920|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.2|16|1),SPLICE_SITE_REGION(LOW||||1259|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.1|16|1),SPLICE_SITE_REGION(LOW||||920|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.2|16|1) FN2429.SNP.3:32684648 chr03:032684648 0 W/32684648-32684648 FN2429 SNP T -> C AC=2;AN=200;BQB=0.710995;DP=4934;DP4=2189,2506,26,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46782e-36;MQSB=0.998404;RPB=0.187105;SGB=256.892;VDB=0.220554;EFF=SPLICE_SITE_DONOR(HIGH||||1259|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.1|16|1),SPLICE_SITE_DONOR(HIGH||||920|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.2|16|1),INTRON(MODIFIER||||1259|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.1|16|1),INTRON(MODIFIER||||920|LOC_Os03g57300|protein_coding|CODING|LOC_Os03g57300.2|16|1);LOF=(LOC_Os03g57300|LOC_Os03g57300|2|1.00) FN2536-S.SNP.3:32704483 chr03:032704483 0 W/32704483-32704483 FN2536-S SNP G -> T AC=1;AN=198;BQB=0.804057;DP=4085;DP4=1818,2072,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000244798;MQB=1.76349e-07;MQSB=0.748514;RPB=0.952398;SGB=13.7737;VDB=0.303542;EFF=START_GAINED(LOW||||422|LOC_Os03g57330|protein_coding|CODING|LOC_Os03g57330.1|1|1),UTR_5_PRIME(MODIFIER||476||422|LOC_Os03g57330|protein_coding|CODING|LOC_Os03g57330.1|1|1) FN2536-S.SNP.3:32704489 chr03:032704489 0 W/32704489-32704489 FN2536-S SNP A -> T AC=1;AN=198;BQB=0.828506;DP=4093;DP4=1670,2076,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.61515e-06;MQSB=0.745259;RPB=0.918104;SGB=13.7737;VDB=0.170749;EFF=UTR_5_PRIME(MODIFIER||482||422|LOC_Os03g57330|protein_coding|CODING|LOC_Os03g57330.1|1|1) FN3710-S.SNP.3:32704677 chr03:032704677 0 W/32704677-32704677 FN3710-S SNP T -> C AC=1;AN=190;BQB=0.785847;DP=3207;DP4=1627,1322,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48639e-06;MQSB=0.96628;RPB=0.289782;SGB=1.00337;VDB=0.238753;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.3:32717424 chr03:032717424 0 W/32717424-32717424 FN-309 Single Base Substitution G-A INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2573-S.SNP.3:32720589 chr03:032720589 0 W/32720589-32720589 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.836667;DP=3674;DP4=1711,1802,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00217746;MQB=1.84742e-05;MQSB=0.999681;RPB=0.877802;SGB=35.7638;VDB=0.256052;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1552|LOC_Os03g57370|protein_coding|CODING|LOC_Os03g57370.1|2|1),INTRON(MODIFIER||||1552|LOC_Os03g57370|protein_coding|CODING|LOC_Os03g57370.1|1|1);LOF=(LOC_Os03g57370|LOC_Os03g57370|1|1.00) W360-2S-2.SNP.3:32723373 chr03:032723373 0 W/32723373-32723373 W360-2S-2 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g57370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN-208.SNP.3:32725621 chr03:032725621 0 W/32725621-32725621 FN-208 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2696-S.SNP.3:32726847 chr03:032726847 0 W/32726847-32726847 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.316224;DP=4812;DP4=2421,2136,16,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00228595;MQB=4.72433e-07;MQSB=0.942157;RPB=0.880002;SGB=104.921;VDB=0.436146;EFF=INTRON(MODIFIER||||818|LOC_Os03g57380|protein_coding|CODING|LOC_Os03g57380.1|5|1) FN3413-S.SNP.3:32731391 chr03:032731391 0 W/32731391-32731391 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.561769;DP=3297;DP4=1618,1588,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.43669e-06;MQSB=0.999506;RPB=0.989534;SGB=15.7097;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.3:32732401 chr03:032732401 0 W/32732401-32732401 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.999811;DP=2375;DP4=1094,1198,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81839e-07;MQSB=0.737067;RPB=0.83227;SGB=18.552;VDB=0.583571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M149L|227|LOC_Os03g57400|protein_coding|CODING|LOC_Os03g57400.1|2|1) FN2272-S.SNP.3:32739930 chr03:032739930 0 W/32739930-32739930 FN2272-S SNP A -> C AC=1;AN=190;BQB=0.164109;DP=4240;DP4=1545,1881,26,28;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.64182e-21;MQSB=0.0193839;RPB=0.391437;SGB=-109.711;VDB=0.37763;EFF=INTRON(MODIFIER||||156|LOC_Os03g57420|protein_coding|CODING|LOC_Os03g57420.1|1|1) FN2098-S.SNP.3:32744074 chr03:032744074 0 W/32744074-32744074 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.70397;DP=3003;DP4=2049,916,18,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20188e-13;MQSB=0.908077;RPB=0.997326;SGB=-44.0584;VDB=0.641585;EFF=UTR_3_PRIME(MODIFIER||98||129|LOC_Os03g57425|protein_coding|CODING|LOC_Os03g57425.1|1|1) FN893-S.SNP.3:32745092 chr03:032745092 0 W/32745092-32745092 FN893-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3746-S.SNP.3:32759219 chr03:032759219 0 W/32759219-32759219 FN3746-S SNP A -> C AC=2;AN=190;BQB=0.762165;DP=2575;DP4=1064,1348,11,13;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00038835;MQB=2.87473e-08;MQSB=0.659536;RPB=0.991837;SGB=103.742;VDB=0.263643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Gca|S386A|474|LOC_Os03g57460|protein_coding|CODING|LOC_Os03g57460.1|1|1) FN3383-S.SNP.3:32761603 chr03:032761603 0 W/32761603-32761603 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.833802;DP=3138;DP4=1448,1589,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00573614;MQB=0.320069;MQSB=4.7594e-05;RPB=0.829988;SGB=32.2261;VDB=0.0433325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.3:32766071 chr03:032766071 0 W/32766071-32766071 FN3440-S SNP A -> T AC=1;AN=184;BQB=0.995952;DP=3579;DP4=1386,1925,10,18;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.027382;MQB=0.179721;MQSB=0;RPB=0.480691;SGB=-8.97434;VDB=0.176745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y971F|1046|LOC_Os03g57470|protein_coding|CODING|LOC_Os03g57470.1|1|1) FN3360-S.SNP.3:32772495 chr03:032772495 0 W/32772495-32772495 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.980146;DP=3659;DP4=1802,1741,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.174911;MQB=0.085401;MQSB=0.00125531;RPB=0.63789;SGB=74.4875;VDB=0.560696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A186T|1980|LOC_Os03g57480|protein_coding|CODING|LOC_Os03g57480.1|1|1) FN4151-S.SNP.3:32774239 chr03:032774239 0 W/32774239-32774239 FN4151-S SNP C -> T AC=1;AN=170;BQB=0.901488;DP=1667;DP4=850,732,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0179964;MQB=0.987158;MQSB=8.66987e-18;RPB=0.0896914;SGB=38.987;VDB=0.822799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.3:32774982 chr03:032774982 0 W/32774982-32774982 FN3105-S SNP A -> T AC=1;AN=184;BQB=0.911256;DP=2951;DP4=1523,1304,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.0645e-11;MQSB=0.927793;RPB=0.124181;SGB=56.8786;VDB=0.0342123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.3:32774982 chr03:032774982 0 W/32774982-32774982 FN3992-S SNP A -> T AC=1;AN=168;BQB=0.64028;DP=2649;DP4=1251,1270,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.40303e-06;MQSB=0.999996;RPB=0.914151;SGB=22.1847;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.3:32776142 chr03:032776142 0 W/32776142-32776142 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.549981;DP=2625;DP4=1397,1068,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16166e-07;MQSB=0.972071;RPB=0.168588;SGB=18.552;VDB=0.374498;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.3:32782764 chr03:032782764 0 W/32782764-32782764 FN-309 Single Base Substitution G-T UTR_5_PRIME HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1326-S.SNP.3:32789503 chr03:032789503 0 W/32789503-32789503 FN1326-S Single Base Substitution T-A INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1073-S.SNP.3:32790129 chr03:032790129 0 W/32790129-32790129 FN1073-S Single Base Substitution A-G INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN521-S.SNP.3:32797005 chr03:032797005 0 W/32797005-32797005 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3594-S.SNP.3:32804122 chr03:032804122 0 W/32804122-32804122 FN3594-S SNP A -> G AC=1;AN=188;BQB=0.643299;DP=2515;DP4=1196,1236,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.48087e-06;MQSB=0.963073;RPB=0.544995;SGB=35.9843;VDB=0.424341;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.3:32810653 chr03:032810653 0 W/32810653-32810653 FN1385-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g57540 expressed protein SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3285-S.SNP.3:32818694 chr03:032818694 0 W/32818694-32818694 FN3285-S SNP C -> T AC=1;AN=184;BQB=0.942899;DP=3047;DP4=1492,1444,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04762e-09;MQSB=0.177111;RPB=0.984204;SGB=28.3187;VDB=0.156203;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S547|1060|LOC_Os03g57560|protein_coding|CODING|LOC_Os03g57560.1|18|1) FN1465-S.SNP.3:32820063 chr03:032820063 0 W/32820063-32820063 FN1465-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g57560 piwi domain containing protein, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3651-S.SNP.3:32827836 chr03:032827836 0 W/32827836-32827836 FN3651-S SNP C -> A AC=1;AN=190;BQB=0.905888;DP=2672;DP4=1039,1525,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46431e-05;MQSB=0.997856;RPB=0.989088;SGB=44.5415;VDB=0.16077;EFF=UTR_5_PRIME(MODIFIER||60||182|LOC_Os03g57569|protein_coding|CODING|LOC_Os03g57569.1|1|1),UTR_5_PRIME(MODIFIER||60||182|LOC_Os03g57569|protein_coding|CODING|LOC_Os03g57569.2|1|1) FN3513-S.SNP.3:32828675 chr03:032828675 0 W/32828675-32828675 FN3513-S SNP G -> A AC=1;AN=188;BQB=0.770381;DP=3816;DP4=1654,2062,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.07244e-05;MQSB=0.946118;RPB=0.818844;SGB=44.4357;VDB=0.95753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.3:32829390 chr03:032829390 0 W/32829390-32829390 FN1295-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3778-S.SNP.3:32845011 chr03:032845011 0 W/32845011-32845011 FN3778-S SNP A -> C AC=1;AN=190;BQB=0.228865;DP=2851;DP4=1640,1105,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27079e-07;MQSB=0.975363;RPB=0.477215;SGB=76.4186;VDB=0.405934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.3:32848120 chr03:032848120 0 W/32848120-32848120 FN1112-S Single Base Substitution T-A INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2622-S.SNP.3:32849314 chr03:032849314 0 W/32849314-32849314 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.530896;DP=4540;DP4=2281,2031,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00286e-12;MQSB=0.999952;RPB=0.963066;SGB=58.2954;VDB=0.552074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A125V|130|LOC_Os03g57630|protein_coding|CODING|LOC_Os03g57630.1|2|1) FN2622-S.SNP.3:32849316 chr03:032849316 0 W/32849316-32849316 FN2622-S SNP C -> A AC=1;AN=200;BQB=0.614739;DP=4537;DP4=2345,1993,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.33273e-12;MQSB=0.988986;RPB=0.953976;SGB=54.6902;VDB=0.548428;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M124I|130|LOC_Os03g57630|protein_coding|CODING|LOC_Os03g57630.1|2|1) FN2622-S.SNP.3:32849318 chr03:032849318 0 W/32849318-32849318 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.997544;DP=4550;DP4=2298,2008,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59031e-14;MQSB=0.996635;RPB=0.777356;SGB=-10.6896;VDB=0.393532;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M124L|130|LOC_Os03g57630|protein_coding|CODING|LOC_Os03g57630.1|2|1) FN2739-S.SNP.3:32851337 chr03:032851337 0 W/32851337-32851337 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.869678;DP=5112;DP4=2464,2383,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65989e-14;MQSB=0.991972;RPB=0.976449;SGB=109.527;VDB=0.514621;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.3:32851904 chr03:032851904 0 W/32851904-32851904 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.979781;DP=3980;DP4=2104,1776,21,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.55113e-18;MQSB=0.541351;RPB=0.787141;SGB=71.1891;VDB=0.319759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Gcc|P145A|360|LOC_Os03g57640|protein_coding|CODING|LOC_Os03g57640.1|1|1) FN-309.SNP.3:32854211 chr03:032854211 0 W/32854211-32854211 FN-309 Single Base Substitution G-C INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN3353-S.SNP.3:32855410 chr03:032855410 0 W/32855410-32855410 FN3353-S SNP G -> A AC=2;AN=184;BQB=0.102405;DP=2613;DP4=1235,1296,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.16922e-09;MQSB=0.997449;RPB=0.996939;SGB=78.0093;VDB=0.653205;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.3:32858907 chr03:032858907 0 W/32858907-32858907 FN701-S Single Base Substitution C-T INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2205-S.SNP.3:32872462 chr03:032872462 0 W/32872462-32872462 FN2205-S SNP G -> A AC=2;AN=190;BQB=0.0891638;DP=4819;DP4=2111,2367,19,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.4606e-22;MQSB=0.788894;RPB=0.903507;SGB=100.276;VDB=0.707426;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q723*|1356|LOC_Os03g57680|protein_coding|CODING|LOC_Os03g57680.1|4|1);LOF=(LOC_Os03g57680|LOC_Os03g57680|1|1.00);NMD=(LOC_Os03g57680|LOC_Os03g57680|1|1.00) W466-5-1.SNP.3:32892460 chr03:032892460 0 W/32892460-32892460 W466-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN4249-S.SNP.3:32893439 chr03:032893439 0 W/32893439-32893439 FN4249-S SNP C -> T AC=2;AN=170;BQB=0.959419;DP=2722;DP4=1459,1082,13,17;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=2.83854e-13;MQSB=0.317393;RPB=0.976501;SGB=58.9663;VDB=0.35655;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN-144 Single Base Substitution G-C INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1031-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN1031-S Single Base Substitution G-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1492-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN1492-S Single Base Substitution G-C INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2173-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN2173-S SNP G -> C AC=2;AN=168;BQB=0.200827;DP=3644;DP4=2246,1323,28,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.25636e-13;MQSB=0.945368;RPB=0.665974;SGB=-94.7442;VDB=0.482416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN2439 SNP G -> C AC=2;AN=200;BQB=0.194042;DP=4347;DP4=1829,2180,8,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000230044;MQB=6.60157e-12;MQSB=0.481106;RPB=0.811489;SGB=86.5007;VDB=0.175311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN2790-S SNP G -> C AC=2;AN=198;BQB=0.38006;DP=4104;DP4=1657,2169,16,34;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.1889e-25;MQSB=0.942901;RPB=0.988996;SGB=114.983;VDB=0.0238019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN3456-S SNP G -> C AC=2;AN=184;BQB=0.654894;DP=2903;DP4=1176,1461,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.81604e-10;MQSB=0.977528;RPB=0.899393;SGB=45.9712;VDB=0.877289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN3564-S SNP G -> C AC=2;AN=188;BQB=0.985729;DP=2883;DP4=1176,1447,15,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.49315e-13;MQSB=0.886507;RPB=0.628522;SGB=112.585;VDB=0.00503964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN3998-S SNP G -> C AC=1;AN=168;BQB=0.694463;DP=2653;DP4=1132,1246,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89191e-06;MQSB=0.873345;RPB=0.581872;SGB=7.05233;VDB=0.244289;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN4189-S SNP G -> C AC=1;AN=170;BQB=0.965029;DP=2551;DP4=1059,1234,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.08581e-07;MQSB=0.999256;RPB=0.411792;SGB=56.7575;VDB=0.749658;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN432-S Single Base Substitution G-C INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN533-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN533-S Single Base Substitution G-C INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN626-S.SNP.3:32893619 chr03:032893619 0 W/32893619-32893619 FN626-S Single Base Substitution G-C INTERGENIC HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3448-S.SNP.3:32899562 chr03:032899562 0 W/32899562-32899562 FN3448-S SNP A -> T AC=1;AN=184;BQB=0.983565;DP=3035;DP4=1643,1297,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.80228e-07;MQSB=0.881196;RPB=0.71601;SGB=44.2207;VDB=0.0974925;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.3:32899611 chr03:032899611 0 W/32899611-32899611 FN507-S Single Base Substitution T-A INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN849-S.SNP.3:32901516 chr03:032901516 0 W/32901516-32901516 FN849-S Single Base Substitution T-C INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-184.SNP.3:32903201 chr03:032903201 0 W/32903201-32903201 FN-184 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g57730 uclacyanin-2 precursor, putative, expressed SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-184.SNP.3:32903202 chr03:032903202 0 W/32903202-32903202 FN-184 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2269-S.SNP.3:32908155 chr03:032908155 0 W/32908155-32908155 FN2269-S SNP A -> T AC=2;AN=190;BQB=0.251204;DP=4895;DP4=2524,2075,28,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00020429;MQB=2.81916e-28;MQSB=0.936735;RPB=0.970632;SGB=171.148;VDB=0.353325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.3:32908937 chr03:032908937 0 W/32908937-32908937 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.36335;DP=4872;DP4=2441,2143,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.33292e-11;MQSB=0.668531;RPB=0.795604;SGB=-9.89872;VDB=0.909168;EFF=INTERGENIC(MODIFIER||||||||||1) FN-22.SNP.3:32909811 chr03:032909811 0 W/32909811-32909811 FN-22 Single Base Substitution A-G INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-215.SNP.3:32914111 chr03:032914111 0 W/32914111-32914111 FN-215 Single Base Substitution C-T INTRON HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3732-S.SNP.3:32914579 chr03:032914579 0 W/32914579-32914579 FN3732-S SNP C -> G AC=1;AN=190;BQB=0.987163;DP=2647;DP4=1306,1263,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.49777e-07;MQSB=0.896089;RPB=0.325454;SGB=49.0954;VDB=0.42044;EFF=INTRON(MODIFIER||||218|LOC_Os03g57760|protein_coding|CODING|LOC_Os03g57760.1|1|1),INTRON(MODIFIER||||218|LOC_Os03g57760|protein_coding|CODING|LOC_Os03g57760.2|1|1) FN-247.SNP.3:32914661 chr03:032914661 0 W/32914661-32914661 FN-247 Single Base Substitution A-T INTRON HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1282-S.SNP.3:32924155 chr03:032924155 0 W/32924155-32924155 FN1282-S Single Base Substitution A-G INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN736-S.SNP.3:32933802 chr03:032933802 0 W/32933802-32933802 FN736-S Single Base Substitution C-T INTRON HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2160-S.SNP.3:32935958 chr03:032935958 0 W/32935958-32935958 FN2160-S SNP A -> T AC=1;AN=168;BQB=0.585947;DP=2754;DP4=1657,1050,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46179e-05;MQSB=0.877018;RPB=0.892736;SGB=2.75988;VDB=0.561687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.3:32942294 chr03:032942294 0 W/32942294-32942294 FN2364 SNP C -> A AC=2;AN=192;BQB=0.48248;DP=3996;DP4=1158,2549,14,18;HOB=0.0206163;ICB=0.494846;MQ=34;MQ0F=0.0740741;MQB=0.443748;MQSB=0.0819954;RPB=0.753143;SGB=103.938;VDB=0.205488;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.3:32943044 chr03:032943044 0 W/32943044-32943044 FN-222 Single Base Substitution G-A INTERGENIC HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2749-S.SNP.3:32943286 chr03:032943286 0 W/32943286-32943286 FN2749-S SNP G -> T AC=1;AN=200;BQB=0.939285;DP=2886;DP4=1259,1160,6,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0003465;MQB=0.00849165;MQSB=4.33704e-06;RPB=0.608045;SGB=22.2439;VDB=0.293521;EFF=INTERGENIC(MODIFIER||||||||||1) FN492-S.SNP.3:32946127 chr03:032946127 0 W/32946127-32946127 FN492-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g57820 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2243-S.SNP.3:32949553 chr03:032949553 0 W/32949553-32949553 FN2243-S SNP A -> G AC=1;AN=190;BQB=0.999954;DP=4763;DP4=1900,2585,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01209e-07;MQSB=0.928042;RPB=0.955559;SGB=67.3108;VDB=0.73702;EFF=INTRON(MODIFIER||||423|LOC_Os03g57830|protein_coding|CODING|LOC_Os03g57830.1|1|1) FN3728-S.SNP.3:32958378 chr03:032958378 0 W/32958378-32958378 FN3728-S SNP T -> C AC=1;AN=190;BQB=0.740686;DP=2723;DP4=1453,1133,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.41112e-10;MQSB=0.982889;RPB=0.936525;SGB=33.8752;VDB=0.983961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L119P|431|LOC_Os03g57854|protein_coding|CODING|LOC_Os03g57854.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L119P|378|LOC_Os03g57854|protein_coding|CODING|LOC_Os03g57854.2|1|1) FN-233.SNP.3:32973945 chr03:032973945 0 W/32973945-32973945 FN-233 Single Base Substitution C-T INTERGENIC HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3690-S.SNP.3:32978081 chr03:032978081 0 W/32978081-32978081 FN3690-S SNP A -> T AC=2;AN=190;BQB=0.987238;DP=2679;DP4=1388,1149,5,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.24832e-07;MQSB=0.900121;RPB=0.540532;SGB=25.439;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.3:32984607 chr03:032984607 0 W/32984607-32984607 FN1040-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3553-S.SNP.3:33007664 chr03:033007664 0 W/33007664-33007664 FN3553-S SNP T -> C AC=2;AN=188;BQB=0.846372;DP=2621;DP4=1207,1301,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.33602e-17;MQSB=0.999409;RPB=0.901933;SGB=103.307;VDB=0.444903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.3:33010649 chr03:033010649 0 W/33010649-33010649 FN1116-S Single Base Substitution C-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN740-S.SNP.3:33017443 chr03:033017443 0 W/33017443-33017443 FN740-S Single Base Substitution G-T INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2230-S.SNP.3:33025283 chr03:033025283 0 W/33025283-33025283 FN2230-S SNP G -> C AC=2;AN=190;BQB=0.455904;DP=4991;DP4=2165,2403,28,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.30605e-26;MQSB=0.968663;RPB=0.91131;SGB=167.594;VDB=0.281922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.3:33029503 chr03:033029503 0 W/33029503-33029503 FN1258-S Single Base Substitution C-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3323-S.SNP.3:33029682 chr03:033029682 0 W/33029682-33029682 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.83135;DP=3103;DP4=1531,1441,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.58111e-07;MQSB=0.964222;RPB=0.50626;SGB=-34.7957;VDB=0.0627984;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.3:33029684 chr03:033029684 0 W/33029684-33029684 FN3323-S SNP T -> G AC=1;AN=184;BQB=0.399694;DP=3112;DP4=1505,1490,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.62726e-07;MQSB=0.891475;RPB=0.353424;SGB=25.1826;VDB=0.0797975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.3:33036116 chr03:033036116 0 W/33036116-33036116 FN2281 SNP G -> T AC=1;AN=192;BQB=0.823516;DP=4864;DP4=2083,2353,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39697e-15;MQSB=0.595601;RPB=0.427839;SGB=-225.094;VDB=0.157574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.3:33041331 chr03:033041331 0 W/33041331-33041331 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.836421;DP=4868;DP4=2309,2348,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92003e-07;MQSB=0.950019;RPB=0.980935;SGB=36.6644;VDB=0.525775;EFF=UTR_5_PRIME(MODIFIER||116||411|LOC_Os03g58040|protein_coding|CODING|LOC_Os03g58040.2|1|1),INTRON(MODIFIER||||411|LOC_Os03g58040|protein_coding|CODING|LOC_Os03g58040.1|1|1),INTRON(MODIFIER||||411|LOC_Os03g58040|protein_coding|CODING|LOC_Os03g58040.3|1|1) FN3846-S.SNP.3:33042642 chr03:033042642 0 W/33042642-33042642 FN3846-S SNP T -> G AC=1;AN=190;BQB=0.967315;DP=2691;DP4=1481,1114,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36856e-05;MQSB=0.878431;RPB=0.439504;SGB=39.9877;VDB=0.943878;EFF=INTRON(MODIFIER||||411|LOC_Os03g58040|protein_coding|CODING|LOC_Os03g58040.3|1|1) FN2617-S.SNP.3:33048907 chr03:033048907 0 W/33048907-33048907 FN2617-S SNP C -> A AC=1;AN=198;BQB=0.121833;DP=4084;DP4=2025,1786,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000244858;MQB=3.20759e-15;MQSB=0.996942;RPB=0.978832;SGB=83.2905;VDB=0.14416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.3:33055081 chr03:033055081 0 W/33055081-33055081 FN1048-S Single Base Substitution A-T INTRON HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN2478.SNP.3:33070629 chr03:033070629 0 W/33070629-33070629 FN2478 SNP A -> G AC=1;AN=200;BQB=0.135241;DP=3947;DP4=1452,1719,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000253357;MQB=7.16729e-10;MQSB=0.996811;RPB=0.643796;SGB=26.8797;VDB=0.39289;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S48P|558|LOC_Os03g58080|protein_coding|CODING|LOC_Os03g58080.1|1|1) FN3985-S.SNP.3:33074723 chr03:033074723 0 W/33074723-33074723 FN3985-S SNP A -> T AC=2;AN=168;BQB=0.931708;DP=2580;DP4=942,1481,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.33678e-14;MQSB=0.636228;RPB=0.868137;SGB=123.066;VDB=0.153872;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.3:33076310 chr03:033076310 0 W/33076310-33076310 FN-173 Single Base Substitution G-C INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN-255.SNP.3:33088496 chr03:033088496 0 W/33088496-33088496 FN-255 Single Base Substitution G-A INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN885-S.SNP.3:33104490 chr03:033104490 0 W/33104490-33104490 FN885-S Single Base Substitution T-C INTRON HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN1555-S.SNP.3:33110282 chr03:033110282 0 W/33110282-33110282 FN1555-S Single Base Substitution G-A INTERGENIC Homo SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1219-S.SNP.3:33113922 chr03:033113922 0 W/33113922-33113922 FN1219-S Single Base Substitution G-A INTRON HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN4137-S.SNP.3:33118172 chr03:033118172 0 W/33118172-33118172 FN4137-S SNP A -> T AC=2;AN=170;BQB=0.971525;DP=2319;DP4=1128,1121,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.39431e-11;MQSB=0.991322;RPB=0.575309;SGB=70.0854;VDB=0.165509;EFF=UTR_3_PRIME(MODIFIER||352||249|LOC_Os03g58170|protein_coding|CODING|LOC_Os03g58170.1|5|1),UTR_3_PRIME(MODIFIER||352||190|LOC_Os03g58170|protein_coding|CODING|LOC_Os03g58170.2|4|1) W470-2-1.SNP.3:33119600 chr03:033119600 0 W/33119600-33119600 W470-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3445-S.SNP.3:33119671 chr03:033119671 0 W/33119671-33119671 FN3445-S SNP C -> A AC=1;AN=184;BQB=0.984345;DP=3657;DP4=1553,1978,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.12555e-05;MQSB=0.500707;RPB=0.691681;SGB=39.699;VDB=0.0760147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.3:33120640 chr03:033120640 0 W/33120640-33120640 FN1233-S Single Base Substitution T-A INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN-329.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN-329 Single Base Substitution C-T INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1212-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN1212-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1315-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN1315-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1430-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN1430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1529-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN1529-S Single Base Substitution C-T INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1619-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN1619-S Single Base Substitution C-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2121-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN2121-S SNP C -> T AC=2;AN=168;BQB=0.920668;DP=4090;DP4=1748,2281,14,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28741e-15;MQSB=0.997105;RPB=0.800035;SGB=-131.462;VDB=0.767761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN2445 SNP C -> T AC=2;AN=200;BQB=0.681476;DP=4908;DP4=2012,2618,14,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22921e-24;MQSB=0.802781;RPB=0.675988;SGB=130.399;VDB=0.450405;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN3359-S SNP C -> T AC=2;AN=184;BQB=0.953781;DP=3077;DP4=1389,1582,11,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46004e-15;MQSB=0.997294;RPB=0.999881;SGB=78.0093;VDB=0.263921;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN4049-S SNP C -> T AC=2;AN=168;BQB=0.999616;DP=2673;DP4=1169,1399,7,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.61302e-13;MQSB=0.973571;RPB=0.862533;SGB=96.481;VDB=0.0821406;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.857243;DP=2932;DP4=1411,1440,8,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.36142e-10;MQSB=0.998282;RPB=0.67015;SGB=75.6874;VDB=0.883344;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN437-S Single Base Substitution C-T INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN550-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN550-S Single Base Substitution C-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN673-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN673-S Single Base Substitution C-T INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN770-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN770-S Single Base Substitution C-T INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN885-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN885-S Single Base Substitution C-T INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN912-S.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN912-S Single Base Substitution C-T INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_789-3-1.SNP.3:33122697 chr03:033122697 0 W/33122697-33122697 FN_789-3-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1423-S.SNP.3:33123128 chr03:033123128 0 W/33123128-33123128 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-153.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN-153 Single Base Substitution C-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-292.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN-292 Single Base Substitution C-A INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-55.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN-55 Single Base Substitution C-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN1060-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN1060-S Single Base Substitution C-A INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1123-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN1123-S Single Base Substitution C-A INTERGENIC HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1357-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN1357-S Single Base Substitution C-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1463-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN1463-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1553-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN1553-S Single Base Substitution C-A INTERGENIC Homo SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2280-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN2280-S SNP C -> A AC=2;AN=190;BQB=0.911507;DP=4824;DP4=2252,2205,20,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81239e-24;MQSB=0.91462;RPB=0.382378;SGB=53.8352;VDB=0.341064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN2349 SNP C -> A AC=1;AN=192;BQB=0.954089;DP=5215;DP4=2410,2482,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.43533e-13;MQSB=0.871486;RPB=0.922417;SGB=46.8644;VDB=0.830585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN2410 SNP C -> A AC=1;AN=200;BQB=0.684747;DP=4961;DP4=2201,2448,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33352e-18;MQSB=0.926303;RPB=0.89267;SGB=105.163;VDB=0.324721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN2685-S SNP C -> A AC=2;AN=200;BQB=0.98506;DP=4676;DP4=2227,2182,16,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.37714e-19;MQSB=0.974821;RPB=0.99236;SGB=71.1676;VDB=0.017884;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN355-S Single Base Substitution C-A INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN479-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN479-S Single Base Substitution C-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN710-S.SNP.3:33127137 chr03:033127137 0 W/33127137-33127137 FN710-S Single Base Substitution C-A INTERGENIC HOMO SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN715-S.SNP.3:33134195 chr03:033134195 0 W/33134195-33134195 FN715-S Single Base Substitution T-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1460-S.SNP.3:33137017 chr03:033137017 0 W/33137017-33137017 FN1460-S Single Base Substitution G-A INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN425-S.SNP.3:33139421 chr03:033139421 0 W/33139421-33139421 FN425-S Single Base Substitution C-T INTRON HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN425-S.SNP.3:33139422 chr03:033139422 0 W/33139422-33139422 FN425-S Single Base Substitution A-T INTRON HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN425-S.SNP.3:33139426 chr03:033139426 0 W/33139426-33139426 FN425-S Single Base Substitution C-G INTRON HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1276-S.SNP.3:33141109 chr03:033141109 0 W/33141109-33141109 FN1276-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN-205.SNP.3:33142235 chr03:033142235 0 W/33142235-33142235 FN-205 Single Base Substitution T-C INTERGENIC HET SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2190-S.SNP.3:33149255 chr03:033149255 0 W/33149255-33149255 FN2190-S SNP T -> A AC=1;AN=190;BQB=0.832504;DP=4608;DP4=2214,2125,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16732e-15;MQSB=0.548371;RPB=0.944029;SGB=108.296;VDB=0.954042;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.3:33150091 chr03:033150091 0 W/33150091-33150091 FN1300-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN4078-S.SNP.3:33150749 chr03:033150749 0 W/33150749-33150749 FN4078-S SNP G -> C AC=1;AN=182;BQB=0.65846;DP=3068;DP4=1407,1609,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.50342e-07;MQSB=0.805852;RPB=0.926382;SGB=44.1115;VDB=0.876459;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.3:33178336 chr03:033178336 0 W/33178336-33178336 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.9323;DP=3334;DP4=1533,1729,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.22057e-08;MQSB=0.998739;RPB=0.872242;SGB=53.1331;VDB=0.125774;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.3:33180008 chr03:033180008 0 W/33180008-33180008 FN-173 Single Base Substitution T-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN3991-S.SNP.3:33197573 chr03:033197573 0 W/33197573-33197573 FN3991-S SNP T -> C AC=2;AN=168;BQB=0.276401;DP=3128;DP4=1444,1407,15,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.92438e-21;MQSB=0.653822;RPB=0.568472;SGB=149.651;VDB=0.459508;EFF=INTRON(MODIFIER||||279|LOC_Os03g58260|protein_coding|CODING|LOC_Os03g58260.1|1|1),INTRON(MODIFIER||||279|LOC_Os03g58260|protein_coding|CODING|LOC_Os03g58260.2|1|1) FN2243-S.SNP.3:33197966 chr03:033197966 0 W/33197966-33197966 FN2243-S SNP C -> G AC=1;AN=190;BQB=0.208048;DP=4066;DP4=1872,1773,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42547e-07;MQSB=0.803729;RPB=0.803006;SGB=67.3108;VDB=0.586065;EFF=UTR_5_PRIME(MODIFIER||56||279|LOC_Os03g58260|protein_coding|CODING|LOC_Os03g58260.2|1|1),UTR_5_PRIME(MODIFIER||56||279|LOC_Os03g58260|protein_coding|CODING|LOC_Os03g58260.1|1|1) FN1279-S.SNP.3:33201164 chr03:033201164 0 W/33201164-33201164 FN1279-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g58270 retrotransposon protein, putative, unclassified, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1336-S.SNP.3:33203983 chr03:033203983 0 W/33203983-33203983 FN1336-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1336-S.SNP.3:33203984 chr03:033203984 0 W/33203984-33203984 FN1336-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1336-S.SNP.3:33203987 chr03:033203987 0 W/33203987-33203987 FN1336-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2124-S.SNP.3:33204073 chr03:033204073 0 W/33204073-33204073 FN2124-S SNP T -> A AC=2;AN=168;BQB=0.800323;DP=2822;DP4=1200,1543,16,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.72082e-13;MQSB=0.902358;RPB=0.327649;SGB=-176.456;VDB=0.441992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.3:33204761 chr03:033204761 0 W/33204761-33204761 FN1336-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g58280 expressed protein SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN-265.SNP.3:33212545 chr03:033212545 0 W/33212545-33212545 FN-265 Single Base Substitution G-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1645-S.SNP.3:33217515 chr03:033217515 0 W/33217515-33217515 FN1645-S Single Base Substitution T-C INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN2542-S.SNP.3:33219764 chr03:033219764 0 W/33219764-33219764 FN2542-S SNP A -> C AC=1;AN=198;BQB=0.758636;DP=4414;DP4=2235,1994,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000226552;MQB=3.28133e-08;MQSB=0.40244;RPB=0.845187;SGB=43.7442;VDB=0.0534588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.3:33224948 chr03:033224948 0 W/33224948-33224948 FN3851-S SNP A -> T AC=1;AN=158;BQB=0.696603;DP=2348;DP4=1137,1148,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000180728;MQSB=0.963614;RPB=0.533037;SGB=23.9652;VDB=0.115319;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.3:33230814 chr03:033230814 0 W/33230814-33230814 FN770-S Single Base Substitution A-G INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN424-S.SNP.3:33232689 chr03:033232689 0 W/33232689-33232689 FN424-S Single Base Substitution T-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN_N1-202-3.SNP.3:33234124 chr03:033234124 0 W/33234124-33234124 FN_N1-202-3 Single Base Substitution C-G HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN3319-S.SNP.3:33234849 chr03:033234849 0 W/33234849-33234849 FN3319-S SNP G -> T AC=1;AN=184;BQB=0.46073;DP=2852;DP4=1298,1464,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00668e-06;MQSB=0.890953;RPB=0.0415592;SGB=35.7479;VDB=0.456033;EFF=INTRON(MODIFIER||||294|LOC_Os03g58330|protein_coding|CODING|LOC_Os03g58330.1|4|1) FN3701-S.SNP.3:33238220 chr03:033238220 0 W/33238220-33238220 FN3701-S SNP T -> A AC=2;AN=190;BQB=0.960096;DP=3331;DP4=1460,1701,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.37536e-16;MQSB=0.712489;RPB=0.991529;SGB=59.414;VDB=0.111205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.3:33239734 chr03:033239734 0 W/33239734-33239734 FN1117-S Single Base Substitution T-C INTERGENIC HOMO SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-397.SNP.3:33244584 chr03:033244584 0 W/33244584-33244584 FN-397 Single Base Substitution G-A UTR_3_PRIME HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4025-S.SNP.3:33246477 chr03:033246477 0 W/33246477-33246477 FN4025-S SNP T -> C AC=2;AN=168;BQB=0.982259;DP=2721;DP4=1124,1479,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.07544e-14;MQSB=0.949318;RPB=0.986428;SGB=69.0561;VDB=0.434842;EFF=UTR_3_PRIME(MODIFIER||10||197|LOC_Os03g58350|protein_coding|CODING|LOC_Os03g58350.1|3|1) FN4025-S.SNP.3:33246478 chr03:033246478 0 W/33246478-33246478 FN4025-S SNP C -> T AC=2;AN=168;BQB=0.999513;DP=2735;DP4=1161,1444,11,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.35314e-13;MQSB=0.818265;RPB=0.986362;SGB=87.6193;VDB=0.348106;EFF=UTR_3_PRIME(MODIFIER||9||197|LOC_Os03g58350|protein_coding|CODING|LOC_Os03g58350.1|3|1) FN2221-S.SNP.3:33248043 chr03:033248043 0 W/33248043-33248043 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.317255;DP=4534;DP4=2317,1591,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64536e-09;MQSB=0.886822;RPB=0.939008;SGB=71.8647;VDB=0.0879854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.3:33248281 chr03:033248281 0 W/33248281-33248281 FN3722-S SNP G -> C AC=1;AN=190;BQB=0.86331;DP=3106;DP4=1591,1330,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.47459e-09;MQSB=0.979724;RPB=0.431867;SGB=58.2031;VDB=0.654031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.3:33252240 chr03:033252240 0 W/33252240-33252240 FN1455-S Single Base Substitution C-T INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3545-S.SNP.3:33253737 chr03:033253737 0 W/33253737-33253737 FN3545-S SNP T -> C AC=1;AN=188;BQB=0.868007;DP=3295;DP4=1401,1770,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.56343e-06;MQSB=0.984795;RPB=0.999204;SGB=18.4463;VDB=0.977972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:33254693 chr03:033254693 0 W/33254693-33254693 FN2692-S SNP A -> G AC=1;AN=200;BQB=0.935822;DP=5052;DP4=2760,2146,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46279e-08;MQSB=0.868796;RPB=0.67363;SGB=19.0642;VDB=0.966792;EFF=UTR_3_PRIME(MODIFIER||1163||108|LOC_Os03g58372|protein_coding|CODING|LOC_Os03g58372.1|2|1) FN1449-S.SNP.3:33262800 chr03:033262800 0 W/33262800-33262800 FN1449-S Single Base Substitution G-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2199-S.SNP.3:33263081 chr03:033263081 0 W/33263081-33263081 FN2199-S SNP G -> C AC=1;AN=190;BQB=0.405726;DP=5309;DP4=2587,2210,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26974e-06;MQSB=0.860052;RPB=0.565114;SGB=32.5467;VDB=0.398191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.3:33263607 chr03:033263607 0 W/33263607-33263607 FN1470-S Single Base Substitution C-T INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN4072-S.SNP.3:33266041 chr03:033266041 0 W/33266041-33266041 FN4072-S SNP A -> G AC=1;AN=182;BQB=0.842041;DP=3222;DP4=1734,1382,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.0066e-07;MQSB=0.986975;RPB=0.717375;SGB=15.6115;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.3:33268751 chr03:033268751 0 W/33268751-33268751 FN2529-S SNP C -> T AC=2;AN=198;BQB=0.994488;DP=4203;DP4=2114,1895,10,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.26709e-11;MQSB=0.999547;RPB=0.440621;SGB=52.7004;VDB=0.832127;EFF=INTRON(MODIFIER||||385|LOC_Os03g58390|protein_coding|CODING|LOC_Os03g58390.1|1|1) FN489-S.SNP.3:33268856 chr03:033268856 0 W/33268856-33268856 FN489-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g58390 zinc finger, C3HC4 type domain containing protein, expressed SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN3872-S.SNP.3:33272921 chr03:033272921 0 W/33272921-33272921 FN3872-S SNP C -> A AC=2;AN=158;BQB=0.408116;DP=2006;DP4=817,1064,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000498504;MQB=3.10303e-09;MQSB=0.00620615;RPB=0.183444;SGB=-13.9519;VDB=0.915958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.3:33272976 chr03:033272976 0 W/33272976-33272976 FN1666-S SNP C -> T AC=1;AN=188;BQB=0.860611;DP=3673;DP4=1217,2408,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=7.26372e-05;MQSB=0.00138784;RPB=0.37041;SGB=-13.9132;VDB=0.463639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.3:33274291 chr03:033274291 0 W/33274291-33274291 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.959539;DP=5151;DP4=2838,2107,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.40879e-12;MQSB=0.984182;RPB=0.98699;SGB=32.0901;VDB=0.0560125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.3:33285713 chr03:033285713 0 W/33285713-33285713 FN2661-S SNP T -> G AC=1;AN=200;BQB=0.987764;DP=4977;DP4=2529,2199,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.48274e-14;MQSB=0.986144;RPB=0.415969;SGB=47.7211;VDB=0.484771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.3:33289146 chr03:033289146 0 W/33289146-33289146 FN2342 SNP C -> G AC=2;AN=192;BQB=0.596673;DP=4980;DP4=2247,2460,20,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.63869e-18;MQSB=0.991327;RPB=0.980051;SGB=-87.4713;VDB=0.483264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.3:33295722 chr03:033295722 0 W/33295722-33295722 FN2147-S SNP T -> A AC=1;AN=168;BQB=0.99518;DP=2724;DP4=1673,1013,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.20045e-07;MQSB=0.999361;RPB=0.762394;SGB=38.1788;VDB=0.400447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.3:33299894 chr03:033299894 0 W/33299894-33299894 FN2645-S SNP G -> T AC=1;AN=200;BQB=0.991963;DP=4333;DP4=1872,2217,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.03421e-18;MQSB=0.991951;RPB=0.105532;SGB=94.3471;VDB=0.117286;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.3:33302240 chr03:033302240 0 W/33302240-33302240 FN321-S Single Base Substitution T-A INTERGENIC HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1003-S.SNP.3:33318825 chr03:033318825 0 W/33318825-33318825 FN1003-S Single Base Substitution G-T STOP_GAINED HET LOC_Os03g58490 DUF593 domain containing protein, expressed SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1003-S.SNP.3:33318826 chr03:033318826 0 W/33318826-33318826 FN1003-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g58490 DUF593 domain containing protein, expressed SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN915-S.SNP.3:33330370 chr03:033330370 0 W/33330370-33330370 FN915-S Single Base Substitution A-T INTRON HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN566-S.SNP.3:33340141 chr03:033340141 0 W/33340141-33340141 FN566-S Single Base Substitution T-A INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3506-S.SNP.3:33345878 chr03:033345878 0 W/33345878-33345878 FN3506-S SNP C -> T AC=2;AN=188;BQB=0.457975;DP=2774;DP4=1472,1176,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.03776e-11;MQSB=0.900473;RPB=0.998777;SGB=64.3306;VDB=0.71097;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.3:33349580 chr03:033349580 0 W/33349580-33349580 FN978-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN978-S.SNP.3:33349581 chr03:033349581 0 W/33349581-33349581 FN978-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1136-S.SNP.3:33349927 chr03:033349927 0 W/33349927-33349927 FN1136-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN2599-S.SNP.3:33353143 chr03:033353143 0 W/33353143-33353143 FN2599-S SNP A -> T AC=1;AN=198;BQB=0.662191;DP=4521;DP4=2319,1969,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.50133e-17;MQSB=0.977499;RPB=0.649522;SGB=101.266;VDB=0.43356;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.3:33353427 chr03:033353427 0 W/33353427-33353427 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.994881;DP=2322;DP4=1035,1227,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.53315e-07;MQSB=0.99425;RPB=0.645841;SGB=43.4296;VDB=0.426414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2404.SNP.3:33358846 chr03:033358846 0 W/33358846-33358846 FN2404 SNP T -> C AC=1;AN=200;BQB=0.959217;DP=4745;DP4=2055,2329,12,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62949e-17;MQSB=0.944779;RPB=0.458139;SGB=35.1726;VDB=0.15004;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.3:33367604 chr03:033367604 0 W/33367604-33367604 FN-173 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os03g58590 expressed protein SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN1349-S.SNP.3:33375057 chr03:033375057 0 W/33375057-33375057 FN1349-S Single Base Substitution A-T STOP_GAINED HET LOC_Os03g58600 PAZ domain containing protein, putative, expressed SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN625-S.SNP.3:33375725 chr03:033375725 0 W/33375725-33375725 FN625-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g58600 PAZ domain containing protein, putative, expressed SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-349.SNP.3:33381148 chr03:033381148 0 W/33381148-33381148 FN-349 Single Base Substitution A-T INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN3978-S.SNP.3:33382937 chr03:033382937 0 W/33382937-33382937 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.980655;DP=2196;DP4=1099,977,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.26478e-06;MQSB=0.999553;RPB=0.925753;SGB=27.8864;VDB=0.837708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.3:33382960 chr03:033382960 0 W/33382960-33382960 FN1640-S Single Base Substitution C-T INTERGENIC Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2725-S.SNP.3:33399366 chr03:033399366 0 W/33399366-33399366 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.762349;DP=5145;DP4=2466,2446,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.83093e-07;MQSB=0.994339;RPB=0.812072;SGB=40.4492;VDB=0.227032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H571Y|856|LOC_Os03g58640|protein_coding|CODING|LOC_Os03g58640.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H571Y|813|LOC_Os03g58640|protein_coding|CODING|LOC_Os03g58640.2|2|1) FN3558-S.SNP.3:33400815 chr03:033400815 0 W/33400815-33400815 FN3558-S SNP C -> G AC=2;AN=188;BQB=0.986221;DP=2927;DP4=1510,1330,7,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.42031e-15;MQSB=0.997002;RPB=0.999979;SGB=103.498;VDB=0.838497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V88L|856|LOC_Os03g58640|protein_coding|CODING|LOC_Os03g58640.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V88L|813|LOC_Os03g58640|protein_coding|CODING|LOC_Os03g58640.2|2|1) FN2708-S.SNP.3:33403682 chr03:033403682 0 W/33403682-33403682 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.99964;DP=4850;DP4=2395,2262,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79972e-13;MQSB=0.956165;RPB=0.688708;SGB=72.7161;VDB=0.768584;EFF=INTRON(MODIFIER||||215|LOC_Os03g58650|protein_coding|CODING|LOC_Os03g58650.2|2|1) FN-299.SNP.3:33415093 chr03:033415093 0 W/33415093-33415093 FN-299 Single Base Substitution C-T INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2542-S.SNP.3:33415659 chr03:033415659 0 W/33415659-33415659 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.666154;DP=3715;DP4=1512,2014,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00134589;MQB=3.40891e-07;MQSB=0.95742;RPB=0.675291;SGB=77.1196;VDB=0.512849;EFF=INTRON(MODIFIER||||1445|LOC_Os03g58660|protein_coding|CODING|LOC_Os03g58660.1|11|1) FN1467-S.SNP.3:33419427 chr03:033419427 0 W/33419427-33419427 FN1467-S Single Base Substitution C-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2564-S.SNP.3:33425565 chr03:033425565 0 W/33425565-33425565 FN2564-S SNP C -> T AC=1;AN=198;BQB=0.519097;DP=4156;DP4=1986,1966,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.81316e-07;MQSB=0.99996;RPB=0.329325;SGB=11.1786;VDB=0.759713;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S89|793|LOC_Os03g58700|protein_coding|CODING|LOC_Os03g58700.1|3|1) FN3442-S.SNP.3:33429685 chr03:033429685 0 W/33429685-33429685 FN3442-S SNP A -> T AC=1;AN=184;BQB=0.995699;DP=2219;DP4=1069,1057,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10745e-06;MQSB=0.971394;RPB=0.393502;SGB=-17.3229;VDB=0.113529;EFF=INTRON(MODIFIER||||793|LOC_Os03g58700|protein_coding|CODING|LOC_Os03g58700.1|13|1) FN897-S.SNP.3:33454043 chr03:033454043 0 W/33454043-33454043 FN897-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3880-S.SNP.3:33457734 chr03:033457734 0 W/33457734-33457734 FN3880-S SNP C -> A AC=2;AN=158;BQB=0.609022;DP=2462;DP4=1082,1262,14,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.76457e-15;MQSB=0.999598;RPB=0.142848;SGB=94.7235;VDB=0.0809976;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.3:33465861 chr03:033465861 0 W/33465861-33465861 FN-115 Single Base Substitution A-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2403.SNP.3:33473198 chr03:033473198 0 W/33473198-33473198 FN2403 SNP C -> T AC=1;AN=200;BQB=0.318602;DP=4613;DP4=2279,1996,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34246e-06;MQSB=0.977731;RPB=0.988615;SGB=-14.3206;VDB=0.281015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.3:33481823 chr03:033481823 0 W/33481823-33481823 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1103-S.SNP.3:33481828 chr03:033481828 0 W/33481828-33481828 FN1103-S Single Base Substitution A-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2782-S.SNP.3:33496738 chr03:033496738 0 W/33496738-33496738 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.355676;DP=3991;DP4=1864,1953,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68069e-10;MQSB=0.611167;RPB=0.925435;SGB=67.9293;VDB=0.490965;EFF=INTRON(MODIFIER||||446|LOC_Os03g58820|protein_coding|CODING|LOC_Os03g58820.1|7|1) FN3997-S.SNP.3:33506544 chr03:033506544 0 W/33506544-33506544 FN3997-S SNP T -> A AC=1;AN=168;BQB=0.758332;DP=2571;DP4=1039,1465,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40045e-07;MQSB=0.899491;RPB=0.558206;SGB=12.4615;VDB=0.616215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.3:33510828 chr03:033510828 0 W/33510828-33510828 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.895488;DP=2551;DP4=1230,1194,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04401e-06;MQSB=0.999999;RPB=0.997367;SGB=30.704;VDB=0.886341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.3:33511075 chr03:033511075 0 W/33511075-33511075 FN3939-S SNP G -> A AC=1;AN=158;BQB=0.927023;DP=3029;DP4=1666,1265,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.74576e-09;MQSB=0.99899;RPB=0.279603;SGB=73.2838;VDB=0.580829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.3:33516840 chr03:033516840 0 W/33516840-33516840 FN2558-S SNP T -> G AC=2;AN=198;BQB=0.332627;DP=2984;DP4=1491,855,13,20;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00100536;MQB=3.6447e-09;MQSB=0.995719;RPB=0.323006;SGB=-192.264;VDB=0.0283719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.3:33525237 chr03:033525237 0 W/33525237-33525237 FN2351 SNP C -> T AC=2;AN=192;BQB=0.600397;DP=4971;DP4=2627,2051,19,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.19424e-21;MQSB=0.980575;RPB=0.685241;SGB=-2.91736;VDB=0.803509;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.3:33527601 chr03:033527601 0 W/33527601-33527601 FN-174 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g58900 galactosyltransferase family protein, putative, expressed SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1348-S.SNP.3:33541839 chr03:033541839 0 W/33541839-33541839 FN1348-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g58910 expressed protein SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN876-S.SNP.3:33545544 chr03:033545544 0 W/33545544-33545544 FN876-S Single Base Substitution G-A INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2149-S.SNP.3:33546713 chr03:033546713 0 W/33546713-33546713 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.0652776;DP=3896;DP4=1947,1898,23,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.69925e-13;MQSB=0.955552;RPB=0.908151;SGB=-191.465;VDB=0.212473;EFF=UTR_3_PRIME(MODIFIER||335||655|LOC_Os03g58920|protein_coding|CODING|LOC_Os03g58920.2|7|1),UTR_3_PRIME(MODIFIER||2034||567|LOC_Os03g58920|protein_coding|CODING|LOC_Os03g58920.1|6|1) FN547-S.SNP.3:33551663 chr03:033551663 0 W/33551663-33551663 FN547-S Single Base Substitution G-A INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3716-S.SNP.3:33552863 chr03:033552863 0 W/33552863-33552863 FN3716-S SNP C -> G AC=1;AN=190;BQB=0.941934;DP=3024;DP4=1340,1614,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20925e-08;MQSB=0.995059;RPB=0.578388;SGB=18.552;VDB=0.684686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1700-S.SNP.3:33569556 chr03:033569556 0 W/33569556-33569556 FN1700-S SNP T -> C AC=2;AN=188;BQB=0.355201;DP=1855;DP4=1097,705,15,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.08108e-07;MQSB=0.871934;RPB=0.97232;SGB=-153.343;VDB=0.209278;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.3:33574332 chr03:033574332 0 W/33574332-33574332 FN_N2-29a-1 Single Base Substitution T-C Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3565-S.SNP.3:33575274 chr03:033575274 0 W/33575274-33575274 FN3565-S SNP T -> G AC=2;AN=188;BQB=0.77332;DP=2519;DP4=1140,1238,20,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.2011e-22;MQSB=0.833448;RPB=0.920149;SGB=138.253;VDB=0.479185;EFF=INTRON(MODIFIER||||316|LOC_Os03g58960|protein_coding|CODING|LOC_Os03g58960.1|1|1) FN-408.SNP.3:33577503 chr03:033577503 0 W/33577503-33577503 FN-408 Single Base Substitution A-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.3:33577503 chr03:033577503 0 W/33577503-33577503 FN408-S Single Base Substitution A-T INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2488.SNP.3:33578304 chr03:033578304 0 W/33578304-33578304 FN2488 SNP A -> T AC=1;AN=200;BQB=0.733737;DP=4687;DP4=2343,2050,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58909e-18;MQSB=0.247099;RPB=0.92811;SGB=28.752;VDB=0.227336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.3:33589632 chr03:033589632 0 W/33589632-33589632 FN2663-S SNP G -> T AC=2;AN=200;BQB=0.167868;DP=5252;DP4=2527,2384,23,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.95768e-31;MQSB=0.960259;RPB=0.928319;SGB=229.261;VDB=0.641736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.3:33594597 chr03:033594597 0 W/33594597-33594597 FN3909-S SNP A -> T AC=1;AN=158;BQB=0.971337;DP=2457;DP4=1124,1239,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.35927e-08;MQSB=0.997472;RPB=0.785757;SGB=37.4429;VDB=0.481346;EFF=INTRON(MODIFIER||||546|LOC_Os03g59020|protein_coding|CODING|LOC_Os03g59020.1|4|1) FN_814-7-1.SNP.3:33595268 chr03:033595268 0 W/33595268-33595268 FN_814-7-1 Single Base Substitution T-C HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1152-S.SNP.3:33601997 chr03:033601997 0 W/33601997-33601997 FN1152-S Single Base Substitution T-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN3799-S.SNP.3:33601997 chr03:033601997 0 W/33601997-33601997 FN3799-S SNP T -> A AC=2;AN=190;BQB=0.981919;DP=2360;DP4=1280,947,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.35315e-11;MQSB=0.999973;RPB=0.907685;SGB=68.0854;VDB=0.504141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.3:33601997 chr03:033601997 0 W/33601997-33601997 FN3861-S SNP T -> A AC=2;AN=158;BQB=0.999997;DP=2178;DP4=1186,873,6,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.93854e-07;MQSB=0.907568;RPB=0.958109;SGB=55.806;VDB=0.335261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.3:33608824 chr03:033608824 0 W/33608824-33608824 FN1241-S Single Base Substitution T-C INTRON HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3415-S.SNP.3:33610787 chr03:033610787 0 W/33610787-33610787 FN3415-S SNP T -> C AC=2;AN=184;BQB=0.997035;DP=2374;DP4=1158,1121,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.77892e-13;MQSB=0.905116;RPB=0.952312;SGB=67.4439;VDB=0.116987;EFF=INTRON(MODIFIER||||403|LOC_Os03g59040|protein_coding|CODING|LOC_Os03g59040.1|9|1),INTRON(MODIFIER||||403|LOC_Os03g59040|protein_coding|CODING|LOC_Os03g59040.2|9|1) FN3533-S.SNP.3:33618389 chr03:033618389 0 W/33618389-33618389 FN3533-S SNP C -> T AC=1;AN=188;BQB=0.417841;DP=2812;DP4=1258,1455,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71171e-07;MQSB=0.737474;RPB=0.400669;SGB=43.0708;VDB=0.48571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.3:33620917 chr03:033620917 0 W/33620917-33620917 FN1419-S Single Base Substitution C-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3820-S.SNP.3:33637387 chr03:033637387 0 W/33637387-33637387 FN3820-S SNP C -> A AC=1;AN=190;BQB=0.939883;DP=2396;DP4=1080,1235,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91037e-05;MQSB=0.943691;RPB=0.681058;SGB=35.4339;VDB=0.792725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.3:33639835 chr03:033639835 0 W/33639835-33639835 FN3370-S SNP A -> G AC=1;AN=184;BQB=0.712046;DP=3618;DP4=1886,1574,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.51896e-05;MQSB=0.978922;RPB=0.975725;SGB=35.7479;VDB=0.240536;EFF=INTRON(MODIFIER||||228|LOC_Os03g59090|protein_coding|CODING|LOC_Os03g59090.1|1|1) FN4002-S.SNP.3:33649779 chr03:033649779 0 W/33649779-33649779 FN4002-S SNP G -> T AC=2;AN=168;BQB=0.991989;DP=2894;DP4=1259,1462,16,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.59156e-22;MQSB=0.986363;RPB=0.846534;SGB=120.518;VDB=0.895867;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G144W|555|LOC_Os03g59110|protein_coding|CODING|LOC_Os03g59110.1|1|1) FN_786-4-1.SNP.3:33650989 chr03:033650989 0 W/33650989-33650989 FN_786-4-1 Single Base Substitution G-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3679-S.SNP.3:33651096 chr03:033651096 0 W/33651096-33651096 FN3679-S SNP T -> C AC=1;AN=190;BQB=0.982682;DP=2965;DP4=1521,1290,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.97821e-12;MQSB=0.714175;RPB=0.985079;SGB=33.8752;VDB=0.54253;EFF=INTRON(MODIFIER||||555|LOC_Os03g59110|protein_coding|CODING|LOC_Os03g59110.1|4|1) FN2784-S.SNP.3:33652190 chr03:033652190 0 W/33652190-33652190 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.96949;DP=4046;DP4=1999,1838,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.1073e-13;MQSB=0.99195;RPB=0.977001;SGB=72.5051;VDB=0.780906;EFF=INTRON(MODIFIER||||555|LOC_Os03g59110|protein_coding|CODING|LOC_Os03g59110.1|4|1) FN-63.SNP.3:33662261 chr03:033662261 0 W/33662261-33662261 FN-63 Single Base Substitution T-G INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1470-S.SNP.3:33666317 chr03:033666317 0 W/33666317-33666317 FN1470-S Single Base Substitution C-A INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.3:33666318 chr03:033666318 0 W/33666318-33666318 FN1470-S Single Base Substitution C-A INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN951-S.SNP.3:33672978 chr03:033672978 0 W/33672978-33672978 FN951-S Single Base Substitution C-G INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN1070-S.SNP.3:33678355 chr03:033678355 0 W/33678355-33678355 FN1070-S Single Base Substitution T-C INTERGENIC HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2091-S.SNP.3:33682342 chr03:033682342 0 W/33682342-33682342 FN2091-S SNP T -> C AC=2;AN=168;BQB=0.920387;DP=2904;DP4=1408,1408,20,35;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.37416e-21;MQSB=0.0987638;RPB=0.930204;SGB=9.43054;VDB=0.0353138;EFF=INTRON(MODIFIER||||295|LOC_Os03g59146|protein_coding|CODING|LOC_Os03g59146.1|2|1) FN1617-S.SNP.3:33683797 chr03:033683797 0 W/33683797-33683797 FN1617-S Single Base Substitution C-G INTRON HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN-278.SNP.3:33686502 chr03:033686502 0 W/33686502-33686502 FN-278 Single Base Substitution G-A INTRON HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-342.SNP.3:33686502 chr03:033686502 0 W/33686502-33686502 FN-342 Single Base Substitution G-A INTRON HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3978-S.SNP.3:33686502 chr03:033686502 0 W/33686502-33686502 FN3978-S SNP G -> A AC=1;AN=168;BQB=0.974209;DP=2755;DP4=1401,1227,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.09541e-06;MQSB=0.975951;RPB=0.816666;SGB=-2.96336;VDB=0.155926;EFF=INTRON(MODIFIER||||253|LOC_Os03g59152|protein_coding|CODING|LOC_Os03g59152.1|1|1) FN4154-S.SNP.3:33686502 chr03:033686502 0 W/33686502-33686502 FN4154-S SNP G -> A AC=2;AN=170;BQB=0.990419;DP=2553;DP4=1270,1188,12,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.93847e-13;MQSB=0.993141;RPB=0.994116;SGB=69.3045;VDB=0.151752;EFF=INTRON(MODIFIER||||253|LOC_Os03g59152|protein_coding|CODING|LOC_Os03g59152.1|1|1) FN2342.SNP.3:33699271 chr03:033699271 0 W/33699271-33699271 FN2342 SNP T -> A AC=2;AN=192;BQB=0.625409;DP=3594;DP4=1867,1123,18,2;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.000556483;MQB=0.000354272;MQSB=0;RPB=0.460496;SGB=-12.5113;VDB=0.948481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.3:33701193 chr03:033701193 0 W/33701193-33701193 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.697755;DP=4198;DP4=1831,1864,2,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.74515e-06;MQSB=0.680092;RPB=0.943553;SGB=-16.2163;VDB=0.138034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.3:33702244 chr03:033702244 0 W/33702244-33702244 FN3384-S SNP G -> A AC=1;AN=184;BQB=0.92452;DP=3132;DP4=1504,1532,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00542784;MQB=0.00095032;MQSB=1.01582e-12;RPB=0.867894;SGB=39.699;VDB=0.2142;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.3:33702400 chr03:033702400 0 W/33702400-33702400 FN3380-S SNP G -> C AC=1;AN=184;BQB=0.810336;DP=3317;DP4=1330,1903,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00693398;MQB=0.0153512;MQSB=4.74269e-10;RPB=0.69191;SGB=2.23696;VDB=0.33346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.3:33707908 chr03:033707908 0 W/33707908-33707908 FN2332 SNP A -> T AC=2;AN=192;BQB=0.206631;DP=5447;DP4=2817,2222,30,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.06531e-31;MQSB=0.997391;RPB=0.212851;SGB=71.4931;VDB=0.00158185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.3:33714075 chr03:033714075 0 W/33714075-33714075 FN-245 Single Base Substitution A-G INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN812-S.SNP.3:33715417 chr03:033715417 0 W/33715417-33715417 FN812-S Single Base Substitution G-A INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN_552-1-1.SNP.3:33721243 chr03:033721243 0 W/33721243-33721243 FN_552-1-1 Single Base Substitution T-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3732-S.SNP.3:33721355 chr03:033721355 0 W/33721355-33721355 FN3732-S SNP A -> G AC=1;AN=190;BQB=0.982625;DP=2889;DP4=1363,1388,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96556e-10;MQSB=0.997165;RPB=0.433886;SGB=53.8699;VDB=0.708022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.3:33721744 chr03:033721744 0 W/33721744-33721744 FN2165-S SNP C -> A AC=1;AN=168;BQB=0.0574649;DP=3591;DP4=1078,2480,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08595e-07;MQSB=0.929528;RPB=0.863998;SGB=9.91396;VDB=0.640916;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.3:33737583 chr03:033737583 0 W/33737583-33737583 FN988-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2397.SNP.3:33743771 chr03:033743771 0 W/33743771-33743771 FN2397 SNP A -> C AC=2;AN=200;BQB=0.453434;DP=4326;DP4=2115,1821,33,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000462321;MQB=1.91177e-19;MQSB=2.7722e-09;RPB=0.163903;SGB=210.84;VDB=0.919643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.3:33745747 chr03:033745747 0 W/33745747-33745747 FN3517-S SNP C -> A AC=1;AN=188;BQB=0.869083;DP=2972;DP4=1491,1217,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.93267e-05;MQSB=0.248107;RPB=0.95981;SGB=15.903;VDB=0.988851;EFF=INTRON(MODIFIER||||1181|LOC_Os03g59264|protein_coding|CODING|LOC_Os03g59264.1|5|1) FN_826-4-1.SNP.3:33759711 chr03:033759711 0 W/33759711-33759711 FN_826-4-1 Single Base Substitution C-A Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN2707-S.SNP.3:33760213 chr03:033760213 0 W/33760213-33760213 FN2707-S SNP G -> A AC=2;AN=200;BQB=0.964169;DP=4786;DP4=2152,2339,14,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.57199e-20;MQSB=0.990927;RPB=0.549397;SGB=-2.21717;VDB=0.576244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.3:33761579 chr03:033761579 0 W/33761579-33761579 FN-392 Single Base Substitution A-G INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN3819-S.SNP.3:33761617 chr03:033761617 0 W/33761617-33761617 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.963612;DP=2908;DP4=1472,1353,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.531e-09;MQSB=0.991619;RPB=0.547721;SGB=58.2031;VDB=0.68803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.3:33774806 chr03:033774806 0 W/33774806-33774806 FN1271-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN601-S.SNP.3:33778499 chr03:033778499 0 W/33778499-33778499 FN601-S Single Base Substitution A-G INTRON HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2674-S.SNP.3:33783003 chr03:033783003 0 W/33783003-33783003 FN2674-S SNP A -> T AC=1;AN=200;BQB=0.776065;DP=5280;DP4=2451,2591,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05528e-05;MQSB=0.942166;RPB=0.699638;SGB=40.4492;VDB=0.90364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L566H|1073|LOC_Os03g59340|protein_coding|CODING|LOC_Os03g59340.1|10|1) FN886-S.SNP.3:33784090 chr03:033784090 0 W/33784090-33784090 FN886-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os03g59340 CESA2 - cellulose synthase, expressed SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN505-S.SNP.3:33784419 chr03:033784419 0 W/33784419-33784419 FN505-S Single Base Substitution A-T INTRON HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1670-S.SNP.3:33784799 chr03:033784799 0 W/33784799-33784799 FN1670-S SNP A -> G AC=2;AN=188;BQB=0.193248;DP=4232;DP4=1835,2332,17,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.81653e-22;MQSB=0.991553;RPB=0.431216;SGB=0.212494;VDB=0.235111;EFF=SPLICE_SITE_REGION(LOW||||1073|LOC_Os03g59340|protein_coding|CODING|LOC_Os03g59340.1|4|1),INTRON(MODIFIER||||1073|LOC_Os03g59340|protein_coding|CODING|LOC_Os03g59340.1|4|1) FN1552-S.SNP.3:33803501 chr03:033803501 0 W/33803501-33803501 FN1552-S SNP T -> G AC=2;AN=188;BQB=0.493791;DP=4305;DP4=1951,2296,23,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.09322e-20;MQSB=0.981786;RPB=0.978369;SGB=47.2072;VDB=0.221075;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.3:33825315 chr03:033825315 0 W/33825315-33825315 FN740-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3987-S.SNP.3:33828585 chr03:033828585 0 W/33828585-33828585 FN3987-S SNP A -> G AC=2;AN=168;BQB=0.741451;DP=2549;DP4=1385,1028,18,12;HOB=0.0235261;ICB=0.494119;MQ=20;MQ0F=0.339741;MQB=0.203613;MQSB=6.20397e-19;RPB=0.952802;SGB=93.0718;VDB=0.285334;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.3:33841823 chr03:033841823 0 W/33841823-33841823 FN-159 Single Base Substitution G-A INTERGENIC HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN-159.SNP.3:33841825 chr03:033841825 0 W/33841825-33841825 FN-159 Single Base Substitution T-A INTERGENIC HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2572-S.SNP.3:33854442 chr03:033854442 0 W/33854442-33854442 FN2572-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g59480 expressed protein SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1222-S.SNP.3:33857723 chr03:033857723 0 W/33857723-33857723 FN1222-S Single Base Substitution A-G INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN435-S.SNP.3:33857797 chr03:033857797 0 W/33857797-33857797 FN435-S Single Base Substitution G-T INTERGENIC HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN2162-S.SNP.3:33858726 chr03:033858726 0 W/33858726-33858726 FN2162-S SNP T -> C AC=1;AN=168;BQB=0.0024937;DP=3948;DP4=1934,1961,16,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.68441e-08;MQSB=0.799276;RPB=0.600918;SGB=-155.04;VDB=0.988284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.3:33861350 chr03:033861350 0 W/33861350-33861350 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.310463;DP=5211;DP4=2437,2433,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0721551;MQB=0.168706;MQSB=3.44719e-43;RPB=0.408191;SGB=5.66499;VDB=0.442372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.3:33862802 chr03:033862802 0 W/33862802-33862802 FN1351-S Single Base Substitution A-G INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2630-S.SNP.3:33865469 chr03:033865469 0 W/33865469-33865469 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.0919531;DP=5312;DP4=2496,2467,17,19;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0199548;MQB=1.50384e-12;MQSB=1.57029e-07;RPB=0.845573;SGB=78.9831;VDB=0.508714;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A75|1840|LOC_Os03g59500|protein_coding|CODING|LOC_Os03g59500.1|2|1) FN2210-S.SNP.3:33867298 chr03:033867298 0 W/33867298-33867298 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.43107;DP=3882;DP4=1836,1759,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0252447;MQB=0.00466772;MQSB=0.884035;RPB=0.950031;SGB=-13.7759;VDB=0.194676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G685D|1840|LOC_Os03g59500|protein_coding|CODING|LOC_Os03g59500.1|2|1) FN2659-S.SNP.3:33871859 chr03:033871859 0 W/33871859-33871859 FN2659-S SNP G -> A AC=2;AN=200;BQB=0.863579;DP=4716;DP4=2252,2172,46,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.80364e-30;MQSB=0.510184;RPB=0.16146;SGB=315.767;VDB=0.537063;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R926W|1011|LOC_Os03g59510|protein_coding|CODING|LOC_Os03g59510.1|2|1) FN747-S.SNP.3:33872152 chr03:033872152 0 W/33872152-33872152 FN747-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g59510 retrotransposon protein, putative, unclassified, expressed SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN1097-S.SNP.3:33872752 chr03:033872752 0 W/33872752-33872752 FN1097-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g59510 retrotransposon protein, putative, unclassified, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN883-S.SNP.3:33876436 chr03:033876436 0 W/33876436-33876436 FN883-S Single Base Substitution G-A INTRON HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN_814-7-1.SNP.3:33878822 chr03:033878822 0 W/33878822-33878822 FN_814-7-1 Single Base Substitution G-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3490-S.SNP.3:33881662 chr03:033881662 0 W/33881662-33881662 FN3490-S SNP A -> G AC=1;AN=184;BQB=0.891702;DP=2428;DP4=1283,1067,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21897e-05;MQSB=0.142478;RPB=0.968019;SGB=35.1773;VDB=0.462804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.3:33897331 chr03:033897331 0 W/33897331-33897331 FN2581-S SNP A -> C AC=1;AN=198;BQB=0.983771;DP=4079;DP4=2028,1861,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.08682e-10;MQSB=0.960967;RPB=0.991763;SGB=34.5346;VDB=0.467676;EFF=INTRON(MODIFIER||||197|LOC_Os03g59550|protein_coding|CODING|LOC_Os03g59550.1|2|1) FN1590-S.SNP.3:33899586 chr03:033899586 0 W/33899586-33899586 FN1590-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN484-S.SNP.3:33899928 chr03:033899928 0 W/33899928-33899928 FN484-S Single Base Substitution T-A INTERGENIC HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2328.SNP.3:33909700 chr03:033909700 0 W/33909700-33909700 FN2328 SNP G -> A AC=1;AN=192;BQB=0.535289;DP=5250;DP4=2275,2666,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.84509e-06;MQSB=0.535342;RPB=0.46335;SGB=46.9087;VDB=0.802159;EFF=INTERGENIC(MODIFIER||||||||||1) FN-204.SNP.3:33911564 chr03:033911564 0 W/33911564-33911564 FN-204 Single Base Substitution C-G INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN2582-S.SNP.3:33920939 chr03:033920939 0 W/33920939-33920939 FN2582-S SNP A -> G AC=1;AN=198;BQB=0.655218;DP=4236;DP4=2345,1554,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22075e-08;MQSB=0.759694;RPB=0.361466;SGB=58.1246;VDB=0.831394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L4P|183|LOC_Os03g59580|protein_coding|CODING|LOC_Os03g59580.1|1|1) FN597-S.SNP.3:33922234 chr03:033922234 0 W/33922234-33922234 FN597-S Single Base Substitution A-T INTERGENIC HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2327.SNP.3:33922376 chr03:033922376 0 W/33922376-33922376 FN2327 SNP G -> T AC=1;AN=192;BQB=0.947064;DP=5173;DP4=2706,2214,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.42164e-07;MQSB=0.94282;RPB=0.370402;SGB=13.5279;VDB=0.537886;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.3:33922763 chr03:033922763 0 W/33922763-33922763 FN1388-S Single Base Substitution G-T INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1116-S.SNP.3:33945299 chr03:033945299 0 W/33945299-33945299 FN1116-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g59620 phospholipase, patatin family, putative, expressed SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN402-S.SNP.3:33948606 chr03:033948606 0 W/33948606-33948606 FN402-S Single Base Substitution C-A INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN1192-S.SNP.3:33950072 chr03:033950072 0 W/33950072-33950072 FN1192-S Single Base Substitution C-T INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1708-S.SNP.3:33962905 chr03:033962905 0 W/33962905-33962905 FN1708-S SNP C -> T AC=1;AN=188;BQB=0.000973413;DP=3075;DP4=1957,1085,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000210789;MQSB=0.88751;RPB=0.985787;SGB=-56.0757;VDB=0.301205;EFF=INTRON(MODIFIER||||885|LOC_Os03g59650|protein_coding|CODING|LOC_Os03g59650.1|2|1),INTRON(MODIFIER||||883|LOC_Os03g59650|protein_coding|CODING|LOC_Os03g59650.2|2|1),INTRON(MODIFIER||||840|LOC_Os03g59650|protein_coding|CODING|LOC_Os03g59650.3|2|1) FN2183-S.SNP.3:33970520 chr03:033970520 0 W/33970520-33970520 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.310194;DP=5018;DP4=2384,2303,24,32;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.27483e-15;MQSB=0.251883;RPB=0.986025;SGB=128.369;VDB=0.00746214;EFF=INTRON(MODIFIER||||161|LOC_Os03g59660|protein_coding|CODING|LOC_Os03g59660.1|5|1) FN3909-S.SNP.3:33977543 chr03:033977543 0 W/33977543-33977543 FN3909-S SNP A -> T AC=1;AN=158;BQB=0.962636;DP=2499;DP4=1310,1124,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.9685e-07;MQSB=0.0389073;RPB=0.797557;SGB=30.704;VDB=0.80797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.3:33979755 chr03:033979755 0 W/33979755-33979755 FN2577-S SNP A -> C AC=2;AN=198;BQB=0.0669364;DP=4277;DP4=2224,1892,18,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.99822e-20;MQSB=0.890417;RPB=0.997504;SGB=146.046;VDB=0.842448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.3:33979760 chr03:033979760 0 W/33979760-33979760 FN2577-S SNP T -> C AC=2;AN=198;BQB=0.207254;DP=4284;DP4=2221,1835,20,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.21662e-19;MQSB=0.94607;RPB=0.959687;SGB=38.0616;VDB=0.744352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.3:33981225 chr03:033981225 0 W/33981225-33981225 FN2231-S SNP T -> A AC=1;AN=190;BQB=0.992813;DP=5130;DP4=2143,2664,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.7313e-09;MQSB=0.955323;RPB=0.600873;SGB=31.3213;VDB=0.132827;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.3:33985787 chr03:033985787 0 W/33985787-33985787 FN3362-S SNP T -> A AC=2;AN=184;BQB=0.964945;DP=3126;DP4=1447,1559,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.52156e-23;MQSB=0.885526;RPB=0.879349;SGB=120.271;VDB=0.613453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.3:33985788 chr03:033985788 0 W/33985788-33985788 FN3362-S SNP A -> T AC=2;AN=184;BQB=0.916577;DP=3118;DP4=1377,1542,21,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.5483e-23;MQSB=0.875291;RPB=0.99793;SGB=86.3198;VDB=0.448199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.3:33994231 chr03:033994231 0 W/33994231-33994231 FN3826-S SNP A -> G AC=2;AN=190;BQB=0.975813;DP=2204;DP4=988,1051,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.6533e-11;MQSB=0.356902;RPB=0.867712;SGB=36.4291;VDB=0.116096;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.3:33997620 chr03:033997620 0 W/33997620-33997620 FN1231-S Single Base Substitution A-G INTRON HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN1693-S.SNP.3:34000664 chr03:034000664 0 W/34000664-34000664 FN1693-S SNP G -> A AC=2;AN=188;BQB=0.988959;DP=3286;DP4=1623,1600,17,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.37829e-15;MQSB=0.912026;RPB=0.722043;SGB=27.1443;VDB=0.148751;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.3:34016613 chr03:034016613 0 W/34016613-34016613 FN852-S Single Base Substitution T-G INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2183-S.SNP.3:34026811 chr03:034026811 0 W/34026811-34026811 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.698844;DP=4717;DP4=2404,1879,33,18;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000211999;MQB=2.8174e-16;MQSB=0.118598;RPB=0.787019;SGB=-217.692;VDB=0.477825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.3:34027507 chr03:034027507 0 W/34027507-34027507 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.860527;DP=5000;DP4=2165,2573,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36346e-14;MQSB=0.984517;RPB=0.833764;SGB=-7.05853;VDB=0.139251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.3:34030022 chr03:034030022 0 W/34030022-34030022 FN2301 SNP G -> A AC=1;AN=192;BQB=0.555441;DP=4758;DP4=2606,1868,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000210172;MQB=6.62571e-11;MQSB=0.985538;RPB=0.889552;SGB=13.6122;VDB=0.915928;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.3:34037465 chr03:034037465 0 W/34037465-34037465 FN-116 Single Base Substitution G-T INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN756-S.SNP.3:34038404 chr03:034038404 0 W/34038404-34038404 FN756-S Single Base Substitution C-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2322.SNP.3:34040200 chr03:034040200 0 W/34040200-34040200 FN2322 SNP C -> G AC=2;AN=192;BQB=0.217153;DP=5482;DP4=2667,2392,30,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.55204e-26;MQSB=0.999873;RPB=0.860097;SGB=-107.57;VDB=0.99825;EFF=INTRON(MODIFIER||||53|LOC_Os03g59774|protein_coding|CODING|LOC_Os03g59774.1|1|1) FN1277-S.SNP.3:34044115 chr03:034044115 0 W/34044115-34044115 FN1277-S Single Base Substitution T-C INTRON HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3851-S.SNP.3:34047034 chr03:034047034 0 W/34047034-34047034 FN3851-S SNP C -> T AC=2;AN=158;BQB=0.993976;DP=2066;DP4=776,1194,5,13;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.64152e-06;MQSB=0.563194;RPB=0.171578;SGB=50.9207;VDB=0.0735894;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.3:34050630 chr03:034050630 0 W/34050630-34050630 FN715-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os03g59790 EF hand family protein, putative, expressed SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN_830-6-1.SNP.3:34055026 chr03:034055026 0 W/34055026-34055026 FN_830-6-1 Single Base Substitution G-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1465-S.SNP.3:34056990 chr03:034056990 0 W/34056990-34056990 FN1465-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g59810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3580-S.SNP.3:34059985 chr03:034059985 0 W/34059985-34059985 FN3580-S SNP C -> T AC=1;AN=188;BQB=0.862694;DP=3020;DP4=1432,1528,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00860927;MQB=0.3717;MQSB=0.94795;RPB=0.996522;SGB=62.6088;VDB=0.285676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A329T|1312|LOC_Os03g59810|protein_coding|CODING|LOC_Os03g59810.1|1|1) FN3056-S.SNP.3:34061527 chr03:034061527 0 W/34061527-34061527 FN3056-S SNP A -> C AC=2;AN=184;BQB=0.988298;DP=3124;DP4=1475,1545,9,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000960307;MQB=2.52757e-09;MQSB=0.0512231;RPB=0.917166;SGB=56.8786;VDB=0.479184;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccG|P260|328|LOC_Os03g59820|protein_coding|CODING|LOC_Os03g59820.1|1|1) FN2257-S.SNP.3:34063011 chr03:034063011 0 W/34063011-34063011 FN2257-S SNP G -> T AC=2;AN=190;BQB=0.983612;DP=4487;DP4=2199,1985,26,19;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0013372;MQB=7.89688e-13;MQSB=0.0216597;RPB=0.880778;SGB=199.373;VDB=0.207374;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.3:34066233 chr03:034066233 0 W/34066233-34066233 FN897-S Single Base Substitution T-C INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN-17.SNP.3:34066818 chr03:034066818 0 W/34066818-34066818 FN-17 Single Base Substitution G-A INTERGENIC Homo SNo: 17, Mutant_ID: FN-17, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2797-S.SNP.3:34068309 chr03:034068309 0 W/34068309-34068309 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.573976;DP=4318;DP4=2077,1977,12,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00138953;MQB=1.06948e-14;MQSB=0.376919;RPB=0.682111;SGB=30.086;VDB=0.967526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.3:34077437 chr03:034077437 0 W/34077437-34077437 FN3827-S SNP A -> G AC=1;AN=190;BQB=0.993499;DP=3127;DP4=1144,1852,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.33458e-12;MQSB=0.951658;RPB=0.77597;SGB=80.9724;VDB=0.559054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V165A|222|LOC_Os03g59860|protein_coding|CODING|LOC_Os03g59860.1|4|1) FN1693-S.SNP.3:34079738 chr03:034079738 0 W/34079738-34079738 FN1693-S SNP G -> A AC=2;AN=188;BQB=0.177351;DP=3593;DP4=2155,1377,16,13;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.40906e-10;MQSB=0.734849;RPB=0.0177632;SGB=-142.089;VDB=0.0457545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.3:34079740 chr03:034079740 0 W/34079740-34079740 FN1693-S SNP A -> T AC=2;AN=188;BQB=0.916456;DP=3585;DP4=2146,1384,16,6;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.44709e-12;MQSB=0.726468;RPB=0.417488;SGB=67.8739;VDB=0.147521;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.3:34087463 chr03:034087463 0 W/34087463-34087463 FN951-S Single Base Substitution C-G INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3976-S.SNP.3:34097500 chr03:034097500 0 W/34097500-34097500 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.663999;DP=2637;DP4=1254,1227,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.19221e-07;MQSB=0.821978;RPB=0.740654;SGB=48.4712;VDB=0.980939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.3:34103782 chr03:034103782 0 W/34103782-34103782 FN2301 SNP G -> A AC=1;AN=192;BQB=0.482114;DP=4655;DP4=2053,2325,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.070247;MQB=0.512408;MQSB=0;RPB=0.619967;SGB=-36.1991;VDB=0.344259;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.3:34105201 chr03:034105201 0 W/34105201-34105201 FN941-S Single Base Substitution T-C INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN863-S.SNP.3:34105950 chr03:034105950 0 W/34105950-34105950 FN863-S Single Base Substitution G-T INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN4078-S.SNP.3:34107322 chr03:034107322 0 W/34107322-34107322 FN4078-S SNP C -> A AC=1;AN=182;BQB=0.906201;DP=3284;DP4=1514,1664,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.05116e-07;MQSB=0.997601;RPB=0.928702;SGB=44.1115;VDB=0.877275;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.3:34123219 chr03:034123219 0 W/34123219-34123219 FN-61 Single Base Substitution A-T INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-61.SNP.3:34123883 chr03:034123883 0 W/34123883-34123883 FN-61 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os03g59990 glucosyl transferase, putative, expressed SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3507-S.SNP.3:34132486 chr03:034132486 0 W/34132486-34132486 FN3507-S SNP G -> A AC=2;AN=188;BQB=0.920094;DP=2421;DP4=1252,1110,13,7;HOB=0.0210502;ICB=0.494738;MQ=19;MQ0F=0.152003;MQB=0.991802;MQSB=2.62384e-09;RPB=0.411346;SGB=85.3253;VDB=0.0634953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V19M|1110|LOC_Os03g60010|protein_coding|CODING|LOC_Os03g60010.1|1|1) FN424-S.SNP.3:34146972 chr03:034146972 0 W/34146972-34146972 FN424-S Single Base Substitution C-A INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2337.SNP.3:34153647 chr03:034153647 0 W/34153647-34153647 FN2337 SNP G -> A AC=1;AN=192;BQB=0.397773;DP=4531;DP4=2457,1740,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.1258;MQB=0.867673;MQSB=0.0129891;RPB=0.730579;SGB=34.0426;VDB=0.437779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E370K|1761|LOC_Os03g60050|protein_coding|CODING|LOC_Os03g60050.1|3|1) FN2685-S.SNP.3:34156870 chr03:034156870 0 W/34156870-34156870 FN2685-S SNP G -> A AC=1;AN=200;BQB=0.293491;DP=4425;DP4=2258,1881,5,8;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0879096;MQB=0.990884;MQSB=2.38216e-05;RPB=0.987643;SGB=54.2646;VDB=0.30927;EFF=INTRON(MODIFIER||||1761|LOC_Os03g60050|protein_coding|CODING|LOC_Os03g60050.1|3|1) FN1720-S.SNP.3:34161281 chr03:034161281 0 W/34161281-34161281 FN1720-S SNP C -> T AC=1;AN=188;BQB=0.835328;DP=2632;DP4=1377,1220,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0410334;MQB=0.000336138;MQSB=3.32448e-10;RPB=0.960612;SGB=-13.9132;VDB=0.170532;EFF=INTRON(MODIFIER||||99|LOC_Os03g60060|protein_coding|CODING|LOC_Os03g60060.1|1|1) FN3446-S.SNP.3:34167799 chr03:034167799 0 W/34167799-34167799 FN3446-S SNP A -> C AC=1;AN=184;BQB=0.569938;DP=2846;DP4=1333,1336,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59834e-05;MQSB=0.945168;RPB=0.408691;SGB=-16.8012;VDB=0.785479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.3:34169519 chr03:034169519 0 W/34169519-34169519 FN1431-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g60090 methylenetetrahydrofolate reductase, putative, expressed SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. N1-169-3.SNP.3:34180630 chr03:034180630 0 W/34180630-34180630 N1-169-3 Single Base Substitution C-T INTERGENIC HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-5.SNP.3:34180630 chr03:034180630 0 W/34180630-34180630 N1-169-5 Single Base Substitution C-T INTERGENIC HET SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.3:34180630 chr03:034180630 0 W/34180630-34180630 N1-169-6 Single Base Substitution C-T INTERGENIC HET SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-8.SNP.3:34180630 chr03:034180630 0 W/34180630-34180630 N1-169-8 Single Base Substitution C-T INTERGENIC HET SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.3:34180630 chr03:034180630 0 W/34180630-34180630 N1-169-9 Single Base Substitution C-T INTERGENIC HET SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. N1-169-3.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-3 Single Base Substitution G-C INTERGENIC HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-5.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-5 Single Base Substitution G-C INTERGENIC HET SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-6 Single Base Substitution G-C INTERGENIC HET SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-7 Single Base Substitution G-C INTERGENIC HET SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-8 Single Base Substitution G-C INTERGENIC HET SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.3:34180653 chr03:034180653 0 W/34180653-34180653 N1-169-9 Single Base Substitution G-C INTERGENIC HET SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. N1-169-3.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-3 Single Base Substitution A-G INTERGENIC HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-4 Single Base Substitution A-G INTERGENIC HET SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-5 Single Base Substitution A-G INTERGENIC HET SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-6 Single Base Substitution A-G INTERGENIC HET SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-7 Single Base Substitution A-G INTERGENIC HET SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-8 Single Base Substitution A-G INTERGENIC HET SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.3:34180679 chr03:034180679 0 W/34180679-34180679 N1-169-9 Single Base Substitution A-G INTERGENIC HET SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. W554-1-1.SNP.3:34187661 chr03:034187661 0 W/34187661-34187661 W554-1-1 Single Base Substitution C-T INTRON HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2267-S.SNP.3:34195113 chr03:034195113 0 W/34195113-34195113 FN2267-S SNP C -> G AC=1;AN=190;BQB=0.799182;DP=5059;DP4=2341,2467,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197668;MQB=1.36751e-12;MQSB=0.709666;RPB=0.990858;SGB=90.0802;VDB=0.1697;EFF=UTR_3_PRIME(MODIFIER||319||367|LOC_Os03g60130|protein_coding|CODING|LOC_Os03g60130.2|3|1),UTR_3_PRIME(MODIFIER||319||367|LOC_Os03g60130|protein_coding|CODING|LOC_Os03g60130.1|2|1) FN2115-S.SNP.3:34209328 chr03:034209328 0 W/34209328-34209328 FN2115-S SNP A -> G AC=1;AN=168;BQB=0.11553;DP=3705;DP4=2011,1653,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.67068e-08;MQSB=0.763097;RPB=0.674033;SGB=-251.177;VDB=0.414605;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.3:34213432 chr03:034213432 0 W/34213432-34213432 FN632-S Single Base Substitution T-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2534-S.SNP.3:34226352 chr03:034226352 0 W/34226352-34226352 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.835409;DP=1917;DP4=1780,21,10,0;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13025e-06;MQSB=0.997367;RPB=0.996479;SGB=40.3588;VDB=0.0700156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.3:34227106 chr03:034227106 0 W/34227106-34227106 FN3547-S SNP A -> T AC=1;AN=188;BQB=1;DP=3537;DP4=2042,1395,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.80225e-07;MQSB=0.966223;RPB=0.820462;SGB=10.8165;VDB=0.0898754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.3:34227901 chr03:034227901 0 W/34227901-34227901 FN1650-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g60180 GTPase of unknown function domain containing protein, putative, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN701-S.SNP.3:34231871 chr03:034231871 0 W/34231871-34231871 FN701-S Single Base Substitution T-C INTRON HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3418-S.SNP.3:34234588 chr03:034234588 0 W/34234588-34234588 FN3418-S SNP T -> A AC=1;AN=184;BQB=0.124461;DP=3707;DP4=1949,1579,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000128558;MQSB=0.91904;RPB=0.997022;SGB=15.7097;VDB=0.125621;EFF=UTR_5_PRIME(MODIFIER||874||371|LOC_Os03g60190|protein_coding|CODING|LOC_Os03g60190.1|1|1),UTR_5_PRIME(MODIFIER||874||344|LOC_Os03g60190|protein_coding|CODING|LOC_Os03g60190.2|1|1) FN1459-S.SNP.3:34235510 chr03:034235510 0 W/34235510-34235510 FN1459-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os03g60190 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2708-S.SNP.3:34238255 chr03:034238255 0 W/34238255-34238255 FN2708-S SNP A -> C AC=1;AN=200;BQB=0.687287;DP=5056;DP4=2269,2524,19,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.75133e-15;MQSB=0.864887;RPB=0.391799;SGB=100.316;VDB=0.423255;EFF=UTR_3_PRIME(MODIFIER||523||344|LOC_Os03g60190|protein_coding|CODING|LOC_Os03g60190.2|3|1),UTR_3_PRIME(MODIFIER||178||371|LOC_Os03g60190|protein_coding|CODING|LOC_Os03g60190.1|4|1) FN2690-S.SNP.3:34244973 chr03:034244973 0 W/34244973-34244973 FN2690-S SNP C -> T AC=2;AN=200;BQB=0.975777;DP=4884;DP4=2540,2016,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00020475;MQB=1.34733e-23;MQSB=0.969283;RPB=0.167232;SGB=51.2243;VDB=0.535837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.3:34245146 chr03:034245146 0 W/34245146-34245146 FN2125-S SNP T -> A AC=1;AN=168;BQB=0.137843;DP=3247;DP4=1580,1626,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.72561e-05;MQSB=0.997276;RPB=0.982539;SGB=19.7539;VDB=0.874637;EFF=UTR_3_PRIME(MODIFIER||130||200|LOC_Os03g60220|protein_coding|CODING|LOC_Os03g60220.1|3|1) FN2711-S.SNP.3:34249080 chr03:034249080 0 W/34249080-34249080 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.996664;DP=4922;DP4=2430,2231,12,7;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.0902072;MQB=0.751525;MQSB=0.000280458;RPB=0.851597;SGB=81.8956;VDB=0.200222;EFF=INTRON(MODIFIER||||1224|LOC_Os03g60230|protein_coding|CODING|LOC_Os03g60230.1|1|1) FN504-S.SNP.3:34252902 chr03:034252902 0 W/34252902-34252902 FN504-S Single Base Substitution T-G INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN952-S.SNP.3:34252902 chr03:034252902 0 W/34252902-34252902 FN952-S Single Base Substitution T-G INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2706-S.SNP.3:34253950 chr03:034253950 0 W/34253950-34253950 FN2706-S SNP C -> A AC=1;AN=200;BQB=0.630546;DP=4913;DP4=2108,2604,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.19586e-11;MQSB=0.572586;RPB=0.984522;SGB=72.6852;VDB=0.37829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.3:34253951 chr03:034253951 0 W/34253951-34253951 FN2706-S SNP G -> T AC=1;AN=200;BQB=0.792546;DP=4909;DP4=2052,2623,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71088e-12;MQSB=0.58704;RPB=0.80987;SGB=34.6953;VDB=0.454286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.3:34257135 chr03:034257135 0 W/34257135-34257135 FN3881-S SNP A -> T AC=2;AN=158;BQB=0.899937;DP=2646;DP4=1302,1150,15,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.65176e-16;MQSB=0.994725;RPB=0.411512;SGB=125.717;VDB=0.498044;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.3:34275126 chr03:034275126 0 W/34275126-34275126 FN-211 Single Base Substitution T-C INTERGENIC HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN4247-S.SNP.3:34279729 chr03:034279729 0 W/34279729-34279729 FN4247-S SNP A -> T AC=2;AN=170;BQB=0.857541;DP=1931;DP4=1070,771,10,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.04295e-10;MQSB=0.475617;RPB=0.402289;SGB=65.6427;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.3:34280711 chr03:034280711 0 W/34280711-34280711 FN896-S Single Base Substitution G-C INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN-80.SNP.3:34281622 chr03:034281622 0 W/34281622-34281622 FN-80 Single Base Substitution T-A INTERGENIC HOMO SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN4144-S.SNP.3:34281622 chr03:034281622 0 W/34281622-34281622 FN4144-S SNP T -> A AC=2;AN=170;BQB=0.349907;DP=2553;DP4=1382,1086,12,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.03844e-09;MQSB=0.751076;RPB=0.959507;SGB=10.1031;VDB=0.27151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.3:34289001 chr03:034289001 0 W/34289001-34289001 FN3877-S SNP C -> T AC=1;AN=158;BQB=0.738764;DP=2529;DP4=1143,1297,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.3178e-14;MQSB=0.979945;RPB=0.603481;SGB=38.0354;VDB=0.0810929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.3:34289008 chr03:034289008 0 W/34289008-34289008 FN3877-S SNP A -> G AC=1;AN=158;BQB=0.984293;DP=2481;DP4=1128,1276,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1836e-12;MQSB=0.997185;RPB=0.352579;SGB=77.6532;VDB=0.10096;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.3:34293024 chr03:034293024 0 W/34293024-34293024 FN3382-S SNP T -> C AC=1;AN=184;BQB=0.971128;DP=3001;DP4=1311,1565,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.34709e-08;MQSB=0.999862;RPB=0.999117;SGB=62.3078;VDB=0.995155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.3:34293094 chr03:034293094 0 W/34293094-34293094 FN2105-S SNP A -> G AC=1;AN=168;BQB=0.0606131;DP=3408;DP4=2203,1160,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34418e-08;MQSB=0.976013;RPB=0.231755;SGB=-137.195;VDB=0.105913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.3:34295198 chr03:034295198 0 W/34295198-34295198 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.993929;DP=2890;DP4=1421,1305,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.36397e-15;MQSB=0.974588;RPB=0.389159;SGB=21.2038;VDB=0.30414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.3:34297390 chr03:034297390 0 W/34297390-34297390 FN-345 Single Base Substitution G-A INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4140-S.SNP.3:34300169 chr03:034300169 0 W/34300169-34300169 FN4140-S SNP T -> C AC=2;AN=170;BQB=0.997191;DP=2528;DP4=1025,1405,15,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.56335e-17;MQSB=0.909335;RPB=0.905537;SGB=93.4031;VDB=0.0785021;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.3:34302076 chr03:034302076 0 W/34302076-34302076 FN440-S Single Base Substitution C-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN440-S.SNP.3:34302079 chr03:034302079 0 W/34302079-34302079 FN440-S Single Base Substitution T-A INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN3799-S.SNP.3:34304511 chr03:034304511 0 W/34304511-34304511 FN3799-S SNP G -> T AC=1;AN=190;BQB=0.844704;DP=3113;DP4=1261,1711,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82299e-06;MQSB=0.987848;RPB=0.78899;SGB=28.9929;VDB=0.504358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.3:34308384 chr03:034308384 0 W/34308384-34308384 FN3817-S SNP G -> T AC=1;AN=190;BQB=0.950381;DP=2523;DP4=1334,1068,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14317e-09;MQSB=0.999204;RPB=0.830208;SGB=46.7622;VDB=0.294142;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.3:34314155 chr03:034314155 0 W/34314155-34314155 FN458-S Single Base Substitution G-A INTRON HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN3308-S.SNP.3:34334075 chr03:034334075 0 W/34334075-34334075 FN3308-S SNP G -> T AC=1;AN=184;BQB=0.17141;DP=3101;DP4=1570,1315,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28219e-06;MQSB=0.927548;RPB=0.65799;SGB=-14.1922;VDB=0.984265;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.3:34338625 chr03:034338625 0 W/34338625-34338625 FN3505-S SNP A -> C AC=2;AN=188;BQB=0.985477;DP=2910;DP4=1496,1286,15,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.1202e-12;MQSB=0.848407;RPB=0.996551;SGB=103.498;VDB=0.750478;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccC|P393|519|LOC_Os03g60370|protein_coding|CODING|LOC_Os03g60370.1|9|1) FN-172.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN-172 Single Base Substitution G-A INTERGENIC HOMO SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1026-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1026-S Single Base Substitution G-A INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1175-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1222-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1264-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1264-S Single Base Substitution G-A INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1320-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN1355-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2125-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN2125-S SNP G -> A AC=1;AN=168;BQB=0.795013;DP=2296;DP4=1582,672,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.15885e-05;MQSB=0.80307;RPB=0.911682;SGB=-0.101751;VDB=0.372324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN3933-S SNP G -> A AC=2;AN=158;BQB=0.988415;DP=2670;DP4=1002,1460,10,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.50785e-14;MQSB=0.996456;RPB=0.338778;SGB=56.991;VDB=0.323041;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN4181-S SNP G -> A AC=2;AN=170;BQB=0.80581;DP=2678;DP4=984,1528,13,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20751e-15;MQSB=0.969396;RPB=0.00130234;SGB=86.5178;VDB=0.102224;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN508-S Single Base Substitution G-A INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN618-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN618-S Single Base Substitution G-A INTERGENIC HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN748-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN748-S Single Base Substitution G-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN887-S.SNP.3:34352986 chr03:034352986 0 W/34352986-34352986 FN887-S Single Base Substitution G-A INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN1182-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN1182-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1346-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1381-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN1381-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1467-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2676-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN2676-S SNP G -> A AC=2;AN=200;BQB=0.494756;DP=4963;DP4=2343,2307,37,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.45544e-28;MQSB=0.843802;RPB=0.404386;SGB=-51.5036;VDB=0.380482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.966967;DP=2332;DP4=1289,937,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.97318e-05;MQSB=0.923766;RPB=0.879346;SGB=25.439;VDB=0.699731;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN812-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN812-S Single Base Substitution G-A INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN869-S.SNP.3:34355514 chr03:034355514 0 W/34355514-34355514 FN869-S Single Base Substitution G-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-114.SNP.3:34357014 chr03:034357014 0 W/34357014-34357014 FN-114 Single Base Substitution C-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3525-S.SNP.3:34362621 chr03:034362621 0 W/34362621-34362621 FN3525-S SNP G -> A AC=2;AN=188;BQB=0.552444;DP=2930;DP4=1403,1424,6,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.4412e-06;MQSB=0.844094;RPB=0.150095;SGB=62.6088;VDB=0.00494681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.3:34371142 chr03:034371142 0 W/34371142-34371142 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3516-S.SNP.3:34372102 chr03:034372102 0 W/34372102-34372102 FN3516-S SNP A -> G AC=1;AN=188;BQB=0.936415;DP=2993;DP4=1361,1555,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.90964e-10;MQSB=0.998663;RPB=0.475527;SGB=62.6088;VDB=0.740498;EFF=INTRON(MODIFIER||||109|LOC_Os03g60449|protein_coding|CODING|LOC_Os03g60449.1|1|1) FN2753-S.SNP.3:34375481 chr03:034375481 0 W/34375481-34375481 FN2753-S SNP G -> C AC=1;AN=200;BQB=0.831996;DP=4678;DP4=1943,2398,7,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.49853e-14;MQSB=0.822724;RPB=0.540838;SGB=52.9314;VDB=0.274958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.3:34375686 chr03:034375686 0 W/34375686-34375686 FN1623-S Single Base Substitution A-C INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2424.SNP.3:34377330 chr03:034377330 0 W/34377330-34377330 FN2424 SNP T -> C AC=2;AN=200;BQB=0.226413;DP=4363;DP4=2029,2051,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.99164e-27;MQSB=0.620222;RPB=0.979604;SGB=206.235;VDB=0.266242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.3:34378381 chr03:034378381 0 W/34378381-34378381 FN1471-S SNP C -> T AC=1;AN=188;BQB=0.712202;DP=1161;DP4=234,896,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82242e-06;MQSB=0.361328;RPB=0.997657;SGB=25.3545;VDB=0.154586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T32I|611|LOC_Os03g60460|protein_coding|CODING|LOC_Os03g60460.1|1|1) FN2263-S.SNP.3:34386404 chr03:034386404 0 W/34386404-34386404 FN2263-S SNP C -> A AC=1;AN=190;BQB=0.673674;DP=4716;DP4=2330,2128,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.28334e-17;MQSB=0.989432;RPB=0.926138;SGB=92.9626;VDB=0.81472;EFF=UTR_3_PRIME(MODIFIER||180||203|LOC_Os03g60480|protein_coding|CODING|LOC_Os03g60480.1|3|1) FN672-S.SNP.3:34391226 chr03:034391226 0 W/34391226-34391226 FN672-S Single Base Substitution C-G INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3462-S.SNP.3:34391754 chr03:034391754 0 W/34391754-34391754 FN3462-S SNP C -> T AC=1;AN=184;BQB=0.974568;DP=3181;DP4=1749,1311,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.8319e-05;MQSB=0.81113;RPB=0.801255;SGB=35.1773;VDB=0.0983362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G127R|233|LOC_Os03g60500|protein_coding|CODING|LOC_Os03g60500.1|2|1) FN456-S.SNP.3:34394612 chr03:034394612 0 W/34394612-34394612 FN456-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-95.SNP.3:34396916 chr03:034396916 0 W/34396916-34396916 FN-95 Single Base Substitution T-C INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1467-S.SNP.3:34400916 chr03:034400916 0 W/34400916-34400916 FN1467-S Single Base Substitution A-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN464-S.SNP.3:34401087 chr03:034401087 0 W/34401087-34401087 FN464-S Single Base Substitution T-C INTERGENIC HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN4044-S.SNP.3:34403055 chr03:034403055 0 W/34403055-34403055 FN4044-S SNP G -> A AC=1;AN=168;BQB=0.917377;DP=1574;DP4=825,644,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0139771;MQB=0.761134;MQSB=0.732758;RPB=0.914813;SGB=24.4556;VDB=0.714609;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.3:34403318 chr03:034403318 0 W/34403318-34403318 FN808-S Single Base Substitution C-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN2533-S.SNP.3:34405202 chr03:034405202 0 W/34405202-34405202 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.800172;DP=4119;DP4=1970,1958,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0968682;MQB=0.952071;MQSB=0.843348;RPB=0.2801;SGB=13.7737;VDB=0.50116;EFF=INTRON(MODIFIER||||143|LOC_Os03g60524|protein_coding|CODING|LOC_Os03g60524.1|2|1) FN3863-S.SNP.3:34410600 chr03:034410600 0 W/34410600-34410600 FN3863-S SNP C -> A AC=1;AN=158;BQB=0.976489;DP=2382;DP4=878,1426,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.60876e-08;MQSB=0.854315;RPB=0.696912;SGB=30.704;VDB=0.503225;EFF=UTR_3_PRIME(MODIFIER||741||176|LOC_Os03g60530|protein_coding|CODING|LOC_Os03g60530.3|8|1),UTR_3_PRIME(MODIFIER||412||214|LOC_Os03g60530|protein_coding|CODING|LOC_Os03g60530.1|9|1) FN2583-S.SNP.3:34427427 chr03:034427427 0 W/34427427-34427427 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.261447;DP=5253;DP4=2755,2205,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21043e-13;MQSB=0.997345;RPB=0.287026;SGB=65.5058;VDB=0.186544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.3:34428874 chr03:034428874 0 W/34428874-34428874 FN3564-S SNP A -> T AC=1;AN=188;BQB=0.352802;DP=3382;DP4=1578,1592,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.81861e-08;MQSB=0.908315;RPB=0.670029;SGB=36.2493;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.3:34439027 chr03:034439027 0 W/34439027-34439027 FN1761-S SNP C -> T AC=1;AN=188;BQB=8.16716e-05;DP=4417;DP4=2380,1983,13,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93486e-07;MQSB=0.957099;RPB=0.932061;SGB=-410.392;VDB=0.923492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.3:34439033 chr03:034439033 0 W/34439033-34439033 FN1761-S SNP C -> T AC=1;AN=188;BQB=0.479171;DP=4455;DP4=2407,2007,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.08849e-09;MQSB=0.974999;RPB=0.334096;SGB=-13.3699;VDB=0.833808;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.3:34452102 chr03:034452102 0 W/34452102-34452102 FN1003-S Single Base Substitution T-C INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1760-S.SNP.3:34460173 chr03:034460173 0 W/34460173-34460173 FN1760-S SNP T -> G AC=2;AN=188;BQB=0.0138143;DP=3853;DP4=1834,1968,13,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.68185e-15;MQSB=0.893056;RPB=0.21625;SGB=-46.9554;VDB=0.698361;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.3:34461891 chr03:034461891 0 W/34461891-34461891 FN3500-S SNP C -> G AC=2;AN=188;BQB=0.932114;DP=2488;DP4=1166,1247,13,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28275e-17;MQSB=0.972999;RPB=0.96093;SGB=148.931;VDB=0.408713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.3:34465542 chr03:034465542 0 W/34465542-34465542 FN3831-S SNP T -> C AC=1;AN=190;BQB=0.99652;DP=2402;DP4=1091,1242,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90697e-07;MQSB=0.999987;RPB=0.76878;SGB=44.5415;VDB=0.510754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.3:34470206 chr03:034470206 0 W/34470206-34470206 FN3727-S SNP A -> G AC=1;AN=190;BQB=0.770124;DP=2607;DP4=1232,1274,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70216e-07;MQSB=0.955425;RPB=0.986547;SGB=18.552;VDB=0.781267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.3:34478219 chr03:034478219 0 W/34478219-34478219 FN3998-S SNP G -> C AC=1;AN=168;BQB=0.755898;DP=2230;DP4=870,1259,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.3647e-10;MQSB=0.935312;RPB=0.895862;SGB=45.0404;VDB=0.641471;EFF=UTR_5_PRIME(MODIFIER||10||639|LOC_Os03g60650|protein_coding|CODING|LOC_Os03g60650.1|1|1) FN3998-S.SNP.3:34478220 chr03:034478220 0 W/34478220-34478220 FN3998-S SNP C -> A AC=1;AN=168;BQB=0.647308;DP=2240;DP4=862,1222,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.3433e-09;MQSB=0.872719;RPB=0.99966;SGB=45.0404;VDB=0.776679;EFF=UTR_5_PRIME(MODIFIER||11||639|LOC_Os03g60650|protein_coding|CODING|LOC_Os03g60650.1|1|1) FN-169.SNP.3:34478278 chr03:034478278 0 W/34478278-34478278 FN-169 Single Base Substitution G-A UTR_5_PRIME HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1182-S.SNP.3:34479253 chr03:034479253 0 W/34479253-34479253 FN1182-S Single Base Substitution T-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2463.SNP.3:34479253 chr03:034479253 0 W/34479253-34479253 FN2463 SNP T -> A AC=1;AN=200;BQB=0.979156;DP=4939;DP4=2069,2654,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020247;MQB=1.21835e-14;MQSB=0.315382;RPB=0.965993;SGB=52.9314;VDB=0.333164;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.3:34479555 chr03:034479555 0 W/34479555-34479555 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.997666;DP=2691;DP4=1380,1262,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83012e-06;MQSB=0.997559;RPB=0.987146;SGB=0.908326;VDB=0.891185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.3:34480866 chr03:034480866 0 W/34480866-34480866 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.990512;DP=2415;DP4=1144,1165,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0646e-07;MQSB=0.894317;RPB=0.132564;SGB=58.2031;VDB=0.562048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.3:34480905 chr03:034480905 0 W/34480905-34480905 FN3565-S SNP C -> T AC=1;AN=188;BQB=0.997616;DP=3521;DP4=1642,1778,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83607e-09;MQSB=0.631233;RPB=0.968145;SGB=71.6954;VDB=0.329828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.3:34481502 chr03:034481502 0 W/34481502-34481502 FN2492 SNP G -> A AC=1;AN=200;BQB=0.640418;DP=4999;DP4=2543,2120,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.90534e-12;MQSB=0.1118;RPB=0.393264;SGB=86.5007;VDB=0.220638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.3:34481560 chr03:034481560 0 W/34481560-34481560 FN2481 SNP A -> G AC=2;AN=200;BQB=0.776167;DP=5014;DP4=2884,1869,20,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.4039e-14;MQSB=0.481431;RPB=0.978952;SGB=68.5625;VDB=0.908322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.3:34481605 chr03:034481605 0 W/34481605-34481605 FN1749-S SNP T -> A AC=1;AN=188;BQB=0.87118;DP=2954;DP4=1483,1427,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.6332e-09;MQSB=0.999374;RPB=0.981371;SGB=-93.8106;VDB=0.555695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.3:34489017 chr03:034489017 0 W/34489017-34489017 FN2245-S SNP A -> G AC=2;AN=190;BQB=0.246438;DP=4929;DP4=2237,2146,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00223169;MQB=2.43555e-09;MQSB=0.560121;RPB=0.256248;SGB=-39.0012;VDB=0.662421;EFF=INTRON(MODIFIER||||793|LOC_Os03g60670|protein_coding|CODING|LOC_Os03g60670.1|1|1) FN-34.SNP.3:34490604 chr03:034490604 0 W/34490604-34490604 FN-34 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os03g60670 retrotransposon protein, putative, unclassified, expressed SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN550-S.SNP.3:34494219 chr03:034494219 0 W/34494219-34494219 FN550-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN3443-S.SNP.3:34501826 chr03:034501826 0 W/34501826-34501826 FN3443-S SNP T -> C AC=2;AN=184;BQB=0.987244;DP=2593;DP4=1207,1262,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.81817e-17;MQSB=0.986393;RPB=0.715151;SGB=99.14;VDB=0.278199;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.3:34511876 chr03:034511876 0 W/34511876-34511876 FN_827-1 Single Base Substitution G-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2656-S.SNP.3:34514925 chr03:034514925 0 W/34514925-34514925 FN2656-S SNP A -> G AC=1;AN=200;BQB=0.998116;DP=5275;DP4=2614,2371,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85792e-19;MQSB=0.970647;RPB=0.988887;SGB=63.3521;VDB=0.507823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.3:34520421 chr03:034520421 0 W/34520421-34520421 FN2167-S SNP C -> T AC=1;AN=168;BQB=0.417487;DP=3331;DP4=1460,1831,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04639e-06;MQSB=0.910067;RPB=0.195774;SGB=-15.8033;VDB=0.632343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.3:34521172 chr03:034521172 0 W/34521172-34521172 FN1079-S Single Base Substitution A-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN424-S.SNP.3:34521579 chr03:034521579 0 W/34521579-34521579 FN424-S Single Base Substitution C-G INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN-309.SNP.3:34525296 chr03:034525296 0 W/34525296-34525296 FN-309 Single Base Substitution T-C INTRON HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1015-S.SNP.3:34529598 chr03:034529598 0 W/34529598-34529598 FN1015-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1423-S.SNP.3:34534476 chr03:034534476 0 W/34534476-34534476 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3858-S.SNP.3:34544864 chr03:034544864 0 W/34544864-34544864 FN3858-S SNP G -> T AC=1;AN=158;BQB=0.813166;DP=2429;DP4=1210,1117,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.81689e-07;MQSB=0.968937;RPB=0.78405;SGB=21.4493;VDB=0.300463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M783I|796|LOC_Os03g60800|protein_coding|CODING|LOC_Os03g60800.1|5|1),UTR_3_PRIME(MODIFIER||860||701|LOC_Os03g60810|protein_coding|CODING|LOC_Os03g60810.1|1|1) FN2619-S.SNP.3:34547122 chr03:034547122 0 W/34547122-34547122 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.805546;DP=3530;DP4=1677,1548,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.85775e-15;MQSB=0.836662;RPB=0.889116;SGB=146.046;VDB=0.30141;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A236|701|LOC_Os03g60810|protein_coding|CODING|LOC_Os03g60810.1|1|1) FN3444-S.SNP.3:34549439 chr03:034549439 0 W/34549439-34549439 FN3444-S SNP T -> G AC=2;AN=184;BQB=0.731601;DP=3028;DP4=1633,1272,8,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.92973e-09;MQSB=0.990311;RPB=0.44259;SGB=93.9603;VDB=0.290943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1459-S.SNP.3:34549673 chr03:034549673 0 W/34549673-34549673 FN1459-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN1444-S.SNP.3:34554526 chr03:034554526 0 W/34554526-34554526 FN1444-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN2707-S.SNP.3:34559932 chr03:034559932 0 W/34559932-34559932 FN2707-S SNP T -> C AC=2;AN=200;BQB=0.810293;DP=4433;DP4=1997,2089,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.67217e-14;MQSB=0.675657;RPB=0.412311;SGB=83.5316;VDB=0.849409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I141V|545|LOC_Os03g60820|protein_coding|CODING|LOC_Os03g60820.1|2|1) W276-2-1.SNP.3:34561986 chr03:034561986 0 W/34561986-34561986 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3846-S.SNP.3:34562246 chr03:034562246 0 W/34562246-34562246 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.92498;DP=3392;DP4=1708,1557,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.63386e-13;MQSB=0.741793;RPB=0.661201;SGB=90.0802;VDB=0.775273;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.3:34565099 chr03:034565099 0 W/34565099-34565099 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1254-S.SNP.3:34568233 chr03:034568233 0 W/34568233-34568233 FN1254-S Single Base Substitution T-C INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN707-S.SNP.3:34569952 chr03:034569952 0 W/34569952-34569952 FN707-S Single Base Substitution A-T INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2771-S.SNP.3:34573163 chr03:034573163 0 W/34573163-34573163 FN2771-S SNP G -> T AC=2;AN=198;BQB=0.739314;DP=4091;DP4=2171,1612,23,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.07497e-24;MQSB=0.777394;RPB=0.283862;SGB=49.2274;VDB=0.0142587;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.3:34577392 chr03:034577392 0 W/34577392-34577392 FN1287-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2449.SNP.3:34583730 chr03:034583730 0 W/34583730-34583730 FN2449 SNP G -> A AC=1;AN=200;BQB=0.626575;DP=5282;DP4=2584,2392,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18218e-08;MQSB=0.925466;RPB=0.393921;SGB=1.46408;VDB=0.525775;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.3:34591817 chr03:034591817 0 W/34591817-34591817 FN-215 Single Base Substitution T-A INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-215.SNP.3:34591819 chr03:034591819 0 W/34591819-34591819 FN-215 Single Base Substitution C-A INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-215.SNP.3:34591820 chr03:034591820 0 W/34591820-34591820 FN-215 Single Base Substitution G-A INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN_789-3-1.SNP.3:34596713 chr03:034596713 0 W/34596713-34596713 FN_789-3-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1023-S.SNP.3:34602496 chr03:034602496 0 W/34602496-34602496 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1140-S.SNP.3:34606114 chr03:034606114 0 W/34606114-34606114 FN1140-S Single Base Substitution A-G INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1682-S.SNP.3:34610581 chr03:034610581 0 W/34610581-34610581 FN1682-S SNP C -> A AC=1;AN=188;BQB=0.540995;DP=3685;DP4=1864,1776,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30877e-12;MQSB=0.986847;RPB=0.852294;SGB=78.5038;VDB=0.792579;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E855*|868|LOC_Os03g60910|protein_coding|CODING|LOC_Os03g60910.1|5|1) FN2474.SNP.3:34617106 chr03:034617106 0 W/34617106-34617106 FN2474 SNP T -> A AC=1;AN=200;BQB=0.108061;DP=4696;DP4=2507,1912,13,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49642e-10;MQSB=0.816936;RPB=0.721765;SGB=51.0851;VDB=0.0412401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.3:34617107 chr03:034617107 0 W/34617107-34617107 FN1228-S Single Base Substitution A-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1586-S.SNP.3:34638863 chr03:034638863 0 W/34638863-34638863 FN1586-S Single Base Substitution C-G INTERGENIC Homo SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN322-S.SNP.3:34643742 chr03:034643742 0 W/34643742-34643742 FN322-S Single Base Substitution C-A INTRON HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2674-S.SNP.3:34648748 chr03:034648748 0 W/34648748-34648748 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.995858;DP=4195;DP4=2140,1853,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53026e-10;MQSB=0.982437;RPB=0.42964;SGB=68.0801;VDB=0.528889;EFF=INTRON(MODIFIER||||792|LOC_Os03g60992|protein_coding|CODING|LOC_Os03g60992.1|9|1) FN2234-S.SNP.3:34650117 chr03:034650117 0 W/34650117-34650117 FN2234-S SNP A -> T AC=1;AN=190;BQB=0.8901;DP=4636;DP4=2109,2185,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000431406;MQB=4.10201e-09;MQSB=0.47019;RPB=0.548429;SGB=36.4291;VDB=0.17411;EFF=INTRON(MODIFIER||||792|LOC_Os03g60992|protein_coding|CODING|LOC_Os03g60992.1|6|1) FN3537-S.SNP.3:34650117 chr03:034650117 0 W/34650117-34650117 FN3537-S SNP A -> T AC=2;AN=188;BQB=0.879315;DP=2863;DP4=1343,1388,7,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.00408e-09;MQSB=0.882589;RPB=0.333155;SGB=-12.8266;VDB=0.367257;EFF=INTRON(MODIFIER||||792|LOC_Os03g60992|protein_coding|CODING|LOC_Os03g60992.1|6|1) FN-243.SNP.3:34658021 chr03:034658021 0 W/34658021-34658021 FN-243 Single Base Substitution G-T INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-243.SNP.3:34658022 chr03:034658022 0 W/34658022-34658022 FN-243 Single Base Substitution T-G INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-243.SNP.3:34658024 chr03:034658024 0 W/34658024-34658024 FN-243 Single Base Substitution C-T INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-155.SNP.3:34659896 chr03:034659896 0 W/34659896-34659896 FN-155 Single Base Substitution C-A INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1122-S.SNP.3:34660346 chr03:034660346 0 W/34660346-34660346 FN1122-S Single Base Substitution G-A INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2692-S.SNP.3:34684298 chr03:034684298 0 W/34684298-34684298 FN2692-S SNP T -> A AC=1;AN=200;BQB=0.318721;DP=4680;DP4=2295,2173,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06728e-12;MQSB=0.998771;RPB=0.672852;SGB=11.0951;VDB=0.590519;EFF=INTRON(MODIFIER||||851|LOC_Os03g61050|protein_coding|CODING|LOC_Os03g61050.1|7|1) FN2477.SNP.3:34696873 chr03:034696873 0 W/34696873-34696873 FN2477 SNP G -> A AC=1;AN=200;BQB=0.456021;DP=5119;DP4=2220,2547,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03071e-06;MQSB=0.727745;RPB=0.872275;SGB=33.0593;VDB=0.249604;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.3:34698358 chr03:034698358 0 W/34698358-34698358 FN-110 Single Base Substitution C-T INTERGENIC HOMO SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1499-S.SNP.3:34698907 chr03:034698907 0 W/34698907-34698907 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN494-S.SNP.3:34712106 chr03:034712106 0 W/34712106-34712106 FN494-S Single Base Substitution C-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. W598-2-1.SNP.3:34712720 chr03:034712720 0 W/34712720-34712720 W598-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1459-S.SNP.3:34714130 chr03:034714130 0 W/34714130-34714130 FN1459-S Single Base Substitution A-G INTRON HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN-406.SNP.3:34715309 chr03:034715309 0 W/34715309-34715309 FN-406 Single Base Substitution T-C INTERGENIC HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN502-S.SNP.3:34721688 chr03:034721688 0 W/34721688-34721688 FN502-S Single Base Substitution C-T INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN1162-S.SNP.3:34729816 chr03:034729816 0 W/34729816-34729816 FN1162-S Single Base Substitution G-A INTRON HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN998-S.SNP.3:34732545 chr03:034732545 0 W/34732545-34732545 FN998-S Single Base Substitution G-A INTERGENIC HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN813-S.SNP.3:34738761 chr03:034738761 0 W/34738761-34738761 FN813-S Single Base Substitution A-G INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN-136.SNP.3:34741935 chr03:034741935 0 W/34741935-34741935 FN-136 Single Base Substitution A-C INTERGENIC HOMO SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1420-S.SNP.3:34745428 chr03:034745428 0 W/34745428-34745428 FN1420-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3487-S.SNP.3:34757200 chr03:034757200 0 W/34757200-34757200 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.328924;DP=2603;DP4=1259,1277,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.78227e-08;MQSB=0.96675;RPB=0.444399;SGB=25.7969;VDB=0.897668;EFF=INTRON(MODIFIER||||320|LOC_Os03g61200|protein_coding|CODING|LOC_Os03g61200.1|1|1),INTRON(MODIFIER||||157|LOC_Os03g61200|protein_coding|CODING|LOC_Os03g61200.2|1|1) FN-379.SNP.3:34765646 chr03:034765646 0 W/34765646-34765646 FN-379 Single Base Substitution A-T INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1319-S.SNP.3:34768910 chr03:034768910 0 W/34768910-34768910 FN1319-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g61220 DEAD-box ATP-dependent RNA helicase 3, putative, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2399.SNP.3:34770299 chr03:034770299 0 W/34770299-34770299 FN2399 SNP G -> A AC=2;AN=200;BQB=0.320785;DP=4728;DP4=2328,2089,18,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000211506;MQB=2.0057e-23;MQSB=0.891381;RPB=0.139776;SGB=84.1935;VDB=0.00483931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G572D|758|LOC_Os03g61220|protein_coding|CODING|LOC_Os03g61220.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G572D|757|LOC_Os03g61220|protein_coding|CODING|LOC_Os03g61220.2|7|1) FN2657-S.SNP.3:34773353 chr03:034773353 0 W/34773353-34773353 FN2657-S SNP T -> A AC=1;AN=200;BQB=0.361386;DP=5101;DP4=2334,2534,6,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.93725e-15;MQSB=0.922829;RPB=0.820135;SGB=47.7211;VDB=0.093744;EFF=INTERGENIC(MODIFIER||||||||||1) FN894-S.SNP.3:34787007 chr03:034787007 0 W/34787007-34787007 FN894-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os03g61260 ribosomal L18p/L5e family protein, putative, expressed SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1179-S.SNP.3:34795186 chr03:034795186 0 W/34795186-34795186 FN1179-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN-338.SNP.3:34796848 chr03:034796848 0 W/34796848-34796848 FN-338 Single Base Substitution G-A INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. W466-5-1.SNP.3:34803290 chr03:034803290 0 W/34803290-34803290 W466-5-1 Single Base Substitution A-G INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3537-S.SNP.3:34803592 chr03:034803592 0 W/34803592-34803592 FN3537-S SNP T -> A AC=1;AN=188;BQB=0.999525;DP=3044;DP4=1311,1644,5,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68234e-11;MQSB=0.929815;RPB=0.923248;SGB=11.7114;VDB=0.0980516;EFF=INTRON(MODIFIER||||780|LOC_Os03g61290|protein_coding|CODING|LOC_Os03g61290.1|1|1) FN3566-S.SNP.3:34819371 chr03:034819371 0 W/34819371-34819371 FN3566-S SNP A -> T AC=2;AN=188;BQB=0.978544;DP=2631;DP4=1260,1268,21,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.02659e-20;MQSB=0.827538;RPB=0.662818;SGB=106.85;VDB=0.437704;EFF=INTRON(MODIFIER||||226|LOC_Os03g61330|protein_coding|CODING|LOC_Os03g61330.1|2|1),INTRON(MODIFIER||||226|LOC_Os03g61330|protein_coding|CODING|LOC_Os03g61330.2|2|1),INTRON(MODIFIER||||184|LOC_Os03g61330|protein_coding|CODING|LOC_Os03g61330.3|2|1),INTRON(MODIFIER||||138|LOC_Os03g61330|protein_coding|CODING|LOC_Os03g61330.4|1|1) FN3970-S.SNP.3:34821077 chr03:034821077 0 W/34821077-34821077 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.96567;DP=2489;DP4=1169,1234,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.70063e-09;MQSB=0.896;RPB=0.738149;SGB=61.0344;VDB=0.539953;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L270|333|LOC_Os03g61340|protein_coding|CODING|LOC_Os03g61340.1|4|1) FN-174.SNP.3:34825631 chr03:034825631 0 W/34825631-34825631 FN-174 Single Base Substitution T-C UTR_3_PRIME HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3711-S.SNP.3:34832596 chr03:034832596 0 W/34832596-34832596 FN3711-S SNP A -> T AC=1;AN=190;BQB=0.7684;DP=2745;DP4=1242,1355,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0335155;MQB=0.0636979;MQSB=0.475876;RPB=0.337743;SGB=44.5415;VDB=0.116681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.3:34832667 chr03:034832667 0 W/34832667-34832667 FN1264-S Single Base Substitution T-A INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1506-S.SNP.3:34832667 chr03:034832667 0 W/34832667-34832667 FN1506-S Single Base Substitution T-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1123-S.SNP.3:34834641 chr03:034834641 0 W/34834641-34834641 FN1123-S Single Base Substitution C-G INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1032-S.SNP.3:34839535 chr03:034839535 0 W/34839535-34839535 FN1032-S Single Base Substitution C-T INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3698-S.SNP.3:34841082 chr03:034841082 0 W/34841082-34841082 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.770689;DP=2071;DP4=1087,887,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00012519;MQSB=0.732961;RPB=0.972999;SGB=21.8853;VDB=0.050184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G35V|706|LOC_Os03g61390|protein_coding|CODING|LOC_Os03g61390.1|2|1) FN3293-S.SNP.3:34846358 chr03:034846358 0 W/34846358-34846358 FN3293-S SNP G -> A AC=1;AN=184;BQB=0.989319;DP=3262;DP4=1495,1694,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.15856e-07;MQSB=0.906807;RPB=0.603521;SGB=53.2642;VDB=0.854264;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L920|1629|LOC_Os03g61400|protein_coding|CODING|LOC_Os03g61400.1|4|1) FN-342.SNP.3:34853007 chr03:034853007 0 W/34853007-34853007 FN-342 Single Base Substitution A-G INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2423.SNP.3:34856118 chr03:034856118 0 W/34856118-34856118 FN2423 SNP T -> G AC=1;AN=200;BQB=0.994993;DP=5055;DP4=2487,2295,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34368e-10;MQSB=0.948863;RPB=0.403296;SGB=32.0901;VDB=0.524259;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.3:34858943 chr03:034858943 0 W/34858943-34858943 FN2353 SNP T -> C AC=1;AN=192;BQB=0.998603;DP=5199;DP4=2349,2614,17,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.44586e-15;MQSB=0.388246;RPB=0.853555;SGB=67.3792;VDB=0.133323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.3:34859536 chr03:034859536 0 W/34859536-34859536 FN2354 SNP T -> C AC=1;AN=192;BQB=0.112108;DP=5256;DP4=2545,2490,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.34882e-08;MQSB=0.00835237;RPB=0.882084;SGB=57.6018;VDB=0.979987;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.3:34878037 chr03:034878037 0 W/34878037-34878037 FN937-S Single Base Substitution G-A INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN3765-S.SNP.3:34880264 chr03:034880264 0 W/34880264-34880264 FN3765-S SNP A -> G AC=1;AN=190;BQB=0.840987;DP=2686;DP4=1225,1380,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.00318e-11;MQSB=0.934851;RPB=0.557227;SGB=57.4238;VDB=0.785539;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.3:34885316 chr03:034885316 0 W/34885316-34885316 FN456-S Single Base Substitution G-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2686-S.SNP.3:34887662 chr03:034887662 0 W/34887662-34887662 FN2686-S SNP G -> C AC=2;AN=200;BQB=0.408694;DP=4758;DP4=2244,2104,15,6;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.74818e-12;MQSB=0.971988;RPB=0.869541;SGB=-11.2947;VDB=0.525988;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.3:34894370 chr03:034894370 0 W/34894370-34894370 FN2254-S SNP C -> T AC=2;AN=190;BQB=0.40126;DP=3990;DP4=1832,1943,20,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.32046e-18;MQSB=0.999879;RPB=0.508373;SGB=74.7373;VDB=0.883937;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.3:34898458 chr03:034898458 0 W/34898458-34898458 FN4009-S SNP A -> G AC=2;AN=168;BQB=0.217717;DP=2577;DP4=1307,1146,16,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.08247e-12;MQSB=0.998969;RPB=0.87683;SGB=21.3605;VDB=0.700526;EFF=INTRON(MODIFIER||||594|LOC_Os03g61540|protein_coding|CODING|LOC_Os03g61540.1|4|1),INTRON(MODIFIER||||416|LOC_Os03g61540|protein_coding|CODING|LOC_Os03g61540.2|4|1) 704-1-1.SNP.3:34903308 chr03:034903308 0 W/34903308-34903308 704-1-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN1339-S.SNP.3:34903878 chr03:034903878 0 W/34903878-34903878 FN1339-S Single Base Substitution T-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3519-S.SNP.3:34906388 chr03:034906388 0 W/34906388-34906388 FN3519-S SNP C -> T AC=1;AN=188;BQB=0.331412;DP=3093;DP4=1444,1567,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00133207;MQSB=0.602406;RPB=0.156173;SGB=25.3545;VDB=0.981699;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.3:34911279 chr03:034911279 0 W/34911279-34911279 FN869-S Single Base Substitution G-A INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN1039-S.SNP.3:34919009 chr03:034919009 0 W/34919009-34919009 FN1039-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g61580 expressed protein SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2207-S.SNP.3:34923680 chr03:034923680 0 W/34923680-34923680 FN2207-S SNP T -> G AC=1;AN=190;BQB=0.594349;DP=4394;DP4=1762,2339,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.48682e-05;MQSB=7.68702e-05;RPB=0.479204;SGB=25.439;VDB=0.668972;EFF=UTR_3_PRIME(MODIFIER||116||74|LOC_Os03g61590|protein_coding|CODING|LOC_Os03g61590.1|1|1) FN1577-S.SNP.3:34929955 chr03:034929955 0 W/34929955-34929955 FN1577-S Single Base Substitution T-C INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN880-S.SNP.3:34931088 chr03:034931088 0 W/34931088-34931088 FN880-S Single Base Substitution C-T INTERGENIC HOMO SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3732-S.SNP.3:34931826 chr03:034931826 0 W/34931826-34931826 FN3732-S SNP G -> A AC=1;AN=190;BQB=0.812018;DP=2607;DP4=1280,1235,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38927e-07;MQSB=0.99142;RPB=0.974258;SGB=36.1006;VDB=0.978272;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.3:34939912 chr03:034939912 0 W/34939912-34939912 FN1027-S Single Base Substitution T-C INTRON HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2628-S.SNP.3:34949871 chr03:034949871 0 W/34949871-34949871 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.780694;DP=5007;DP4=2515,2283,10,11;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.094268;MQB=0.35743;MQSB=1.70127e-10;RPB=0.331973;SGB=65.5058;VDB=0.972959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R623W|1335|LOC_Os03g61660|protein_coding|CODING|LOC_Os03g61660.1|1|1) FN3596-S.SNP.3:34949871 chr03:034949871 0 W/34949871-34949871 FN3596-S SNP C -> T AC=2;AN=188;BQB=0.999382;DP=2664;DP4=1278,1315,13,16;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.129129;MQB=0.91432;MQSB=0;RPB=0.072089;SGB=92.677;VDB=0.0936482;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R623W|1335|LOC_Os03g61660|protein_coding|CODING|LOC_Os03g61660.1|1|1) FN2226-S.SNP.3:34951880 chr03:034951880 0 W/34951880-34951880 FN2226-S SNP C -> T AC=1;AN=190;BQB=0.668951;DP=4746;DP4=2315,2080,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.223767;MQB=0.84083;MQSB=0;RPB=0.513398;SGB=36.4291;VDB=0.457878;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V1275|1335|LOC_Os03g61660|protein_coding|CODING|LOC_Os03g61660.1|2|1) FN3658-S.SNP.3:34956626 chr03:034956626 0 W/34956626-34956626 FN3658-S SNP T -> C AC=1;AN=190;BQB=0.679314;DP=2797;DP4=1716,983,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.85624e-07;MQSB=0.533351;RPB=0.79765;SGB=28.9929;VDB=0.288307;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.3:34959910 chr03:034959910 0 W/34959910-34959910 FN898-S Single Base Substitution A-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN4203-S.SNP.3:34962801 chr03:034962801 0 W/34962801-34962801 FN4203-S SNP C -> T AC=1;AN=170;BQB=0.821806;DP=2453;DP4=1188,1213,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.22973e-11;MQSB=1;RPB=0.999997;SGB=87.856;VDB=0.365905;EFF=INTRON(MODIFIER||||386|LOC_Os03g61690|protein_coding|CODING|LOC_Os03g61690.1|3|1) FN2767-S.SNP.3:34976008 chr03:034976008 0 W/34976008-34976008 FN2767-S SNP A -> T AC=1;AN=198;BQB=0.938791;DP=4532;DP4=2323,1922,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.45762e-16;MQSB=0.96328;RPB=0.758569;SGB=47.5102;VDB=0.216121;EFF=INTRON(MODIFIER||||506|LOC_Os03g61710|protein_coding|CODING|LOC_Os03g61710.1|2|1) FN2767-S.SNP.3:34976009 chr03:034976009 0 W/34976009-34976009 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.771133;DP=4525;DP4=2332,1925,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.9849e-15;MQSB=0.924806;RPB=0.894272;SGB=44.9151;VDB=0.464289;EFF=INTRON(MODIFIER||||506|LOC_Os03g61710|protein_coding|CODING|LOC_Os03g61710.1|2|1) FN2767-S.SNP.3:34976011 chr03:034976011 0 W/34976011-34976011 FN2767-S SNP A -> T AC=1;AN=198;BQB=0.965944;DP=4535;DP4=2319,1885,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.68837e-15;MQSB=0.967684;RPB=0.503965;SGB=72.5051;VDB=0.269453;EFF=INTRON(MODIFIER||||506|LOC_Os03g61710|protein_coding|CODING|LOC_Os03g61710.1|2|1) FN2767-S.SNP.3:34978514 chr03:034978514 0 W/34978514-34978514 FN2767-S SNP A -> C AC=1;AN=198;BQB=0.143302;DP=4466;DP4=2118,2113,10,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65465e-12;MQSB=0.96989;RPB=0.464764;SGB=18.9201;VDB=0.736818;EFF=INTRON(MODIFIER||||506|LOC_Os03g61710|protein_coding|CODING|LOC_Os03g61710.1|8|1) FN-169.SNP.3:34984648 chr03:034984648 0 W/34984648-34984648 FN-169 Single Base Substitution A-G INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2136-S.SNP.3:34984883 chr03:034984883 0 W/34984883-34984883 FN2136-S SNP T -> C AC=2;AN=168;BQB=0.100249;DP=3736;DP4=1774,1888,20,43;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.33519e-27;MQSB=1;RPB=0.994652;SGB=-400.535;VDB=0.341313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.3:34989154 chr03:034989154 0 W/34989154-34989154 FN1250-S Single Base Substitution C-A INTRON HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN-142.SNP.3:34996627 chr03:034996627 0 W/34996627-34996627 FN-142 Single Base Substitution A-T UTR_5_PRIME HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN-142.SNP.3:34996628 chr03:034996628 0 W/34996628-34996628 FN-142 Single Base Substitution C-T INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN1301-S.SNP.3:34998342 chr03:034998342 0 W/34998342-34998342 FN1301-S Single Base Substitution T-C INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1195-S.SNP.3:35005040 chr03:035005040 0 W/35005040-35005040 FN1195-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g61750 expressed protein SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3856-S.SNP.3:35006154 chr03:035006154 0 W/35006154-35006154 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.514209;DP=2514;DP4=1182,1228,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.97053e-07;MQSB=0.896966;RPB=0.924399;SGB=34.0735;VDB=0.372324;EFF=INTRON(MODIFIER||||250|LOC_Os03g61750|protein_coding|CODING|LOC_Os03g61750.1|4|1) FN2715-S.SNP.3:35006865 chr03:035006865 0 W/35006865-35006865 FN2715-S SNP T -> C AC=1;AN=200;BQB=0.995427;DP=5189;DP4=2534,2486,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95689e-12;MQSB=0.95614;RPB=0.609401;SGB=72.7161;VDB=0.192197;EFF=INTRON(MODIFIER||||250|LOC_Os03g61750|protein_coding|CODING|LOC_Os03g61750.1|6|1) FN1538-S.SNP.3:35013132 chr03:035013132 0 W/35013132-35013132 FN1538-S Single Base Substitution A-G INTRON HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2113-S.SNP.3:35021399 chr03:035021399 0 W/35021399-35021399 FN2113-S SNP T -> A AC=2;AN=168;BQB=0.18709;DP=3087;DP4=1763,1232,26,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.86858e-15;MQSB=0.934385;RPB=0.542355;SGB=-343.145;VDB=0.00252786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.3:35021399 chr03:035021399 0 W/35021399-35021399 FN3650-S SNP T -> A AC=1;AN=190;BQB=0.999991;DP=2460;DP4=1474,874,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29046e-07;MQSB=0.795183;RPB=0.634604;SGB=46.7622;VDB=0.115869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.3:35026959 chr03:035026959 0 W/35026959-35026959 FN2544-S SNP C -> G AC=2;AN=198;BQB=0.630608;DP=3414;DP4=1584,1575,11,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.01544e-12;MQSB=0.780679;RPB=0.964928;SGB=76.1002;VDB=0.6945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P246R|575|LOC_Os03g61780|protein_coding|CODING|LOC_Os03g61780.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P245R|574|LOC_Os03g61780|protein_coding|CODING|LOC_Os03g61780.2|2|1) FN2251-S.SNP.3:35029639 chr03:035029639 0 W/35029639-35029639 FN2251-S SNP A -> T AC=1;AN=190;BQB=0.960095;DP=5052;DP4=2312,2545,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197941;MQB=1.46038e-07;MQSB=0.496326;RPB=0.426059;SGB=39.6545;VDB=0.207118;EFF=INTRON(MODIFIER||||317|LOC_Os03g61790|protein_coding|CODING|LOC_Os03g61790.2|5|1),INTRON(MODIFIER||||377|LOC_Os03g61790|protein_coding|CODING|LOC_Os03g61790.1|5|1) FN4002-S.SNP.3:35031984 chr03:035031984 0 W/35031984-35031984 FN4002-S SNP G -> C AC=2;AN=168;BQB=0.8108;DP=3028;DP4=1210,1684,14,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.56002e-11;MQSB=0.847964;RPB=0.999986;SGB=105.343;VDB=0.578668;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.3:35032152 chr03:035032152 0 W/35032152-35032152 FN1357-S Single Base Substitution A-G INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3464-S.SNP.3:35032179 chr03:035032179 0 W/35032179-35032179 FN3464-S SNP A -> C AC=2;AN=184;BQB=0.978895;DP=3196;DP4=1407,1541,14,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30156e-09;MQSB=0.883082;RPB=0.824737;SGB=12.8895;VDB=0.304311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.3:35040131 chr03:035040131 0 W/35040131-35040131 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.284533;DP=5025;DP4=2479,2147,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.21505e-11;MQSB=0.955738;RPB=0.425596;SGB=11.0951;VDB=0.566647;EFF=INTRON(MODIFIER||||476|LOC_Os03g61800|protein_coding|CODING|LOC_Os03g61800.1|6|1),INTRON(MODIFIER||||476|LOC_Os03g61800|protein_coding|CODING|LOC_Os03g61800.2|6|1),INTRON(MODIFIER||||460|LOC_Os03g61800|protein_coding|CODING|LOC_Os03g61800.3|5|1) FN-232.SNP.3:35046935 chr03:035046935 0 W/35046935-35046935 FN-232 Single Base Substitution T-C INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-232.SNP.3:35046942 chr03:035046942 0 W/35046942-35046942 FN-232 Single Base Substitution T-C INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-269.SNP.3:35048486 chr03:035048486 0 W/35048486-35048486 FN-269 Single Base Substitution A-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2417.SNP.3:35056286 chr03:035056286 0 W/35056286-35056286 FN2417 SNP T -> A AC=1;AN=200;BQB=0.314423;DP=5151;DP4=2386,2469,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86672e-12;MQSB=0.999987;RPB=0.918864;SGB=118.737;VDB=0.744585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.3:35069909 chr03:035069909 0 W/35069909-35069909 FN3594-S SNP G -> A AC=2;AN=188;BQB=0.983652;DP=1580;DP4=916,516,13,3;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=5.38843e-06;MQSB=0.298488;RPB=0.478864;SGB=46.6141;VDB=0.872232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.3:35072705 chr03:035072705 0 W/35072705-35072705 FN1669-S SNP G -> T AC=1;AN=188;BQB=0.280703;DP=4800;DP4=3437,1321,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.00229167;MQB=0.850847;MQSB=9.02499e-18;RPB=0.480001;SGB=33.7061;VDB=0.285637;EFF=INTRON(MODIFIER||||209|LOC_Os03g61860|protein_coding|CODING|LOC_Os03g61860.1|1|1) FN2487.SNP.3:35078932 chr03:035078932 0 W/35078932-35078932 FN2487 SNP A -> T AC=1;AN=200;BQB=0.865164;DP=3700;DP4=1352,2050,13,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.92042e-09;MQSB=0.0850294;RPB=0.400962;SGB=39.9056;VDB=0.0047551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.3:35080943 chr03:035080943 0 W/35080943-35080943 FN2640-S SNP A -> G AC=1;AN=200;BQB=0.700821;DP=5576;DP4=3224,2004,10,12;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0277977;MQB=0.991852;MQSB=5.20759e-35;RPB=0.844507;SGB=42.5108;VDB=0.236956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.3:35098056 chr03:035098056 0 W/35098056-35098056 FN2742-S SNP C -> A AC=1;AN=200;BQB=0.662245;DP=5057;DP4=2344,2485,9,9;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.585327;MQB=0.212415;MQSB=2.96823e-17;RPB=0.788657;SGB=54.6902;VDB=0.870222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V186L|270|LOC_Os03g61910|protein_coding|CODING|LOC_Os03g61910.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V186L|270|LOC_Os03g61910|protein_coding|CODING|LOC_Os03g61910.1|1|1) FN4208-S.SNP.3:35098263 chr03:035098263 0 W/35098263-35098263 FN4208-S SNP C -> A AC=1;AN=170;BQB=0.998675;DP=2522;DP4=1257,1180,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.326725;MQB=0.1811;MQSB=0;RPB=0.348006;SGB=34.878;VDB=0.251386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A117S|270|LOC_Os03g61910|protein_coding|CODING|LOC_Os03g61910.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A117S|270|LOC_Os03g61910|protein_coding|CODING|LOC_Os03g61910.1|1|1) FN1048-S.SNP.3:35100928 chr03:035100928 0 W/35100928-35100928 FN1048-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g61920 electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1232-S.SNP.3:35107250 chr03:035107250 0 W/35107250-35107250 FN1232-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2153-S.SNP.3:35107250 chr03:035107250 0 W/35107250-35107250 FN2153-S SNP C -> A AC=2;AN=168;BQB=0.112704;DP=4119;DP4=2129,1915,31,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.84404e-23;MQSB=0.988849;RPB=0.975442;SGB=-237.132;VDB=0.0246021;EFF=UTR_3_PRIME(MODIFIER||36||536|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.4|15|1),INTRON(MODIFIER||||655|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.2|15|1),INTRON(MODIFIER||||656|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.1|15|1),INTRON(MODIFIER||||540|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.3|12|1) FN3941-S.SNP.3:35107250 chr03:035107250 0 W/35107250-35107250 FN3941-S SNP C -> A AC=2;AN=168;BQB=0.315953;DP=2591;DP4=1314,1170,13,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.91229e-07;MQSB=0.999954;RPB=0.939986;SGB=9.91396;VDB=0.131345;EFF=UTR_3_PRIME(MODIFIER||36||536|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.4|15|1),INTRON(MODIFIER||||655|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.2|15|1),INTRON(MODIFIER||||656|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.1|15|1),INTRON(MODIFIER||||540|LOC_Os03g61930|protein_coding|CODING|LOC_Os03g61930.3|12|1) FN3056-S.SNP.3:35116081 chr03:035116081 0 W/35116081-35116081 FN3056-S SNP G -> A AC=1;AN=184;BQB=0.672627;DP=3095;DP4=1367,1638,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000550488;MQSB=0.930584;RPB=0.897067;SGB=21.6609;VDB=0.690812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G110D|501|LOC_Os03g61950|protein_coding|CODING|LOC_Os03g61950.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G110D|476|LOC_Os03g61950|protein_coding|CODING|LOC_Os03g61950.2|4|1) FN1333-S.SNP.3:35122160 chr03:035122160 0 W/35122160-35122160 FN1333-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2657-S.SNP.3:35127517 chr03:035127517 0 W/35127517-35127517 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.979056;DP=4971;DP4=2330,2336,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36359e-13;MQSB=0.915311;RPB=0.640339;SGB=45.1159;VDB=0.369399;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A31V|377|LOC_Os03g61970|protein_coding|CODING|LOC_Os03g61970.1|3|1) FN4039-S.SNP.3:35132380 chr03:035132380 0 W/35132380-35132380 FN4039-S SNP C -> T AC=1;AN=168;BQB=0.989785;DP=2861;DP4=1464,1284,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.64492e-08;MQSB=0.878713;RPB=0.682589;SGB=38.1788;VDB=0.268133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L182F|537|LOC_Os03g61980|protein_coding|CODING|LOC_Os03g61980.1|3|1) FN1389-S.SNP.3:35136987 chr03:035136987 0 W/35136987-35136987 FN1389-S Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3793-S.SNP.3:35143196 chr03:035143196 0 W/35143196-35143196 FN3793-S SNP C -> A AC=1;AN=190;BQB=0.999986;DP=2842;DP4=1435,1261,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.70093e-11;MQSB=0.984128;RPB=0.946223;SGB=28.7675;VDB=0.559409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.3:35144541 chr03:035144541 0 W/35144541-35144541 FN2191-S SNP T -> C AC=1;AN=190;BQB=0.978752;DP=4962;DP4=2342,2216,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.49586e-07;MQSB=0.987037;RPB=0.912956;SGB=15.9981;VDB=0.0131446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.3:35144650 chr03:035144650 0 W/35144650-35144650 FN3594-S SNP A -> G AC=2;AN=188;BQB=0.678058;DP=2786;DP4=1259,1309,15,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.75991e-15;MQSB=0.953103;RPB=0.893006;SGB=-4.67716;VDB=0.988772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.3:35145055 chr03:035145055 0 W/35145055-35145055 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.904474;DP=3097;DP4=1558,1370,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07407e-06;MQSB=0.976346;RPB=0.835409;SGB=25.3545;VDB=0.18288;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.3:35148730 chr03:035148730 0 W/35148730-35148730 FN4135-S SNP T -> A AC=2;AN=182;BQB=0.99881;DP=2818;DP4=1497,1203,19,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.53378e-17;MQSB=0.999922;RPB=0.386635;SGB=125.307;VDB=0.417313;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.5|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R46W|107|LOC_Os03g62030|protein_coding|CODING|LOC_Os03g62030.6|1|1) FN-403.SNP.3:35149387 chr03:035149387 0 W/35149387-35149387 FN-403 Single Base Substitution A-G INTRON HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.3:35149387 chr03:035149387 0 W/35149387-35149387 FN403-S Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3997-S.SNP.3:35162272 chr03:035162272 0 W/35162272-35162272 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.65604;DP=2986;DP4=1184,1533,21,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000334896;MQB=1.28506e-19;MQSB=0.280813;RPB=0.996685;SGB=-194.301;VDB=0.978943;EFF=INTRON(MODIFIER||||417|LOC_Os03g62060|protein_coding|CODING|LOC_Os03g62060.1|4|1) FN2541-S.SNP.3:35162886 chr03:035162886 0 W/35162886-35162886 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.551605;DP=3924;DP4=1901,1749,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.39255e-06;MQSB=0.906198;RPB=0.99606;SGB=40.3588;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F386L|417|LOC_Os03g62060|protein_coding|CODING|LOC_Os03g62060.1|5|1) FN-387.SNP.3:35165614 chr03:035165614 0 W/35165614-35165614 FN-387 Single Base Substitution T-A INTRON HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2553-S.SNP.3:35176378 chr03:035176378 0 W/35176378-35176378 FN2553-S SNP G -> T AC=2;AN=198;BQB=0.999994;DP=4185;DP4=2047,1837,14,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.84292e-15;MQSB=0.999189;RPB=0.990769;SGB=123.071;VDB=0.2537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.3:35178962 chr03:035178962 0 W/35178962-35178962 FN2656-S SNP G -> T AC=2;AN=200;BQB=0.283766;DP=4623;DP4=2240,2109,30,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.05143e-29;MQSB=0.90852;RPB=0.463098;SGB=220.051;VDB=0.549084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K228N|1092|LOC_Os03g62090|protein_coding|CODING|LOC_Os03g62090.1|5|1) FN-198.SNP.3:35179301 chr03:035179301 0 W/35179301-35179301 FN-198 Single Base Substitution A-C INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-306.SNP.3:35183383 chr03:035183383 0 W/35183383-35183383 FN-306 Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN900-S.SNP.3:35185487 chr03:035185487 0 W/35185487-35185487 FN900-S Single Base Substitution T-A INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN-198.SNP.3:35190638 chr03:035190638 0 W/35190638-35190638 FN-198 Single Base Substitution A-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN3551-S.SNP.3:35193462 chr03:035193462 0 W/35193462-35193462 FN3551-S SNP A -> G AC=2;AN=188;BQB=0.298822;DP=2932;DP4=1444,1394,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.64186e-10;MQSB=0.962557;RPB=0.104345;SGB=33.7061;VDB=0.286183;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K250|560|LOC_Os03g62110|protein_coding|CODING|LOC_Os03g62110.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K250|535|LOC_Os03g62110|protein_coding|CODING|LOC_Os03g62110.3|7|1) FN-66.SNP.3:35198703 chr03:035198703 0 W/35198703-35198703 FN-66 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g62120 heat shock protein DnaJ, putative, expressed SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN3666-S.SNP.3:35201856 chr03:035201856 0 W/35201856-35201856 FN3666-S SNP G -> A AC=1;AN=190;BQB=0.930434;DP=2819;DP4=1354,1365,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10769e-11;MQSB=0.995608;RPB=0.983153;SGB=53.8699;VDB=0.210319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.3:35202256 chr03:035202256 0 W/35202256-35202256 FN3844-S SNP C -> T AC=2;AN=190;BQB=0.996523;DP=3112;DP4=1463,1512,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5176e-13;MQSB=0.701978;RPB=0.640574;SGB=94.6341;VDB=0.260048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.3:35210359 chr03:035210359 0 W/35210359-35210359 FN-281 Single Base Substitution T-C INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2219-S.SNP.3:35213458 chr03:035213458 0 W/35213458-35213458 FN2219-S SNP A -> G AC=1;AN=190;BQB=0.728824;DP=4037;DP4=2047,1491,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.09286e-07;MQSB=0.0872025;RPB=0.542395;SGB=39.6545;VDB=0.439122;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q154|722|LOC_Os03g62170|protein_coding|CODING|LOC_Os03g62170.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q154|518|LOC_Os03g62170|protein_coding|CODING|LOC_Os03g62170.2|2|1) FN2315.SNP.3:35218920 chr03:035218920 0 W/35218920-35218920 FN2315 SNP T -> G AC=1;AN=192;BQB=0.360062;DP=5036;DP4=2418,2310,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.4971e-11;MQSB=0.937577;RPB=0.332069;SGB=71.8591;VDB=0.610728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.3:35221860 chr03:035221860 0 W/35221860-35221860 FN1023-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g62180 lectin protein kinase family protein, putative, expressed SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN414-S.SNP.3:35225100 chr03:035225100 0 W/35225100-35225100 FN414-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g62190 transposon protein, putative, unclassified, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN3967-S.SNP.3:35229500 chr03:035229500 0 W/35229500-35229500 FN3967-S SNP G -> A AC=1;AN=182;BQB=0.895591;DP=3320;DP4=1603,1648,12,9;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.106627;MQB=0.980898;MQSB=0.360621;RPB=0.271164;SGB=89.2199;VDB=0.117156;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1023|1384|LOC_Os03g62190|protein_coding|CODING|LOC_Os03g62190.1|7|1) FN-208.SNP.3:35231426 chr03:035231426 0 W/35231426-35231426 FN-208 Single Base Substitution A-T INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. W426-1-1.SNP.3:35232891 chr03:035232891 0 W/35232891-35232891 W426-1-1 Single Base Substitution G-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN267-S.SNP.3:35238019 chr03:035238019 0 W/35238019-35238019 FN267-S Single Base Substitution A-G INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN2115-S.SNP.3:35239015 chr03:035239015 0 W/35239015-35239015 FN2115-S SNP C -> T AC=1;AN=168;BQB=0.924181;DP=2581;DP4=1256,1284,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22803e-10;MQSB=0.999988;RPB=0.999302;SGB=14.2064;VDB=0.446486;EFF=INTRON(MODIFIER||||479|LOC_Os03g62200|protein_coding|CODING|LOC_Os03g62200.1|1|1) FN3733-S.SNP.3:35243009 chr03:035243009 0 W/35243009-35243009 FN3733-S SNP C -> T AC=2;AN=190;BQB=0.429316;DP=2541;DP4=965,1451,8,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.74062e-10;MQSB=0.902032;RPB=0.945741;SGB=117.403;VDB=0.151349;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.3:35243934 chr03:035243934 0 W/35243934-35243934 FN1129-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g62220 expressed protein SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN441-S.SNP.3:35244839 chr03:035244839 0 W/35244839-35244839 FN441-S Single Base Substitution C-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2734-S.SNP.3:35246336 chr03:035246336 0 W/35246336-35246336 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.981991;DP=4925;DP4=2416,2237,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62703e-09;MQSB=0.612452;RPB=0.991609;SGB=24.2746;VDB=0.425169;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.3:35248813 chr03:035248813 0 W/35248813-35248813 FN4122-S SNP G -> T AC=1;AN=182;BQB=0.993279;DP=3124;DP4=1669,1375,13,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000320102;MQB=1.02949e-09;MQSB=0.999907;RPB=0.510715;SGB=71.1765;VDB=0.77197;EFF=INTRON(MODIFIER||||117|LOC_Os03g62224|protein_coding|CODING|LOC_Os03g62224.1|1|1) FN-137.SNP.3:35249024 chr03:035249024 0 W/35249024-35249024 FN-137 Single Base Substitution A-T INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-137.SNP.3:35249025 chr03:035249025 0 W/35249025-35249025 FN-137 Single Base Substitution C-T INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1537-S.SNP.3:35253185 chr03:035253185 0 W/35253185-35253185 FN1537-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3472-S.SNP.3:35253555 chr03:035253555 0 W/35253555-35253555 FN3472-S SNP G -> C AC=1;AN=184;BQB=0.737577;DP=2833;DP4=1304,1431,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.60587e-12;MQSB=0.81507;RPB=0.978215;SGB=67.4439;VDB=0.016591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A75G|214|LOC_Os03g62240|protein_coding|CODING|LOC_Os03g62240.1|2|1) FN1012-S.SNP.3:35256165 chr03:035256165 0 W/35256165-35256165 FN1012-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os03g62250 zinc finger, C3HC4 type domain containing protein, expressed SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2465.SNP.3:35265555 chr03:035265555 0 W/35265555-35265555 FN2465 SNP G -> A AC=1;AN=200;BQB=0.855962;DP=5424;DP4=2739,2339,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38824e-16;MQSB=0.833701;RPB=0.745676;SGB=90.7419;VDB=0.767647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.3:35268561 chr03:035268561 0 W/35268561-35268561 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.99596;DP=4783;DP4=1905,2621,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.8188e-14;MQSB=0.984324;RPB=0.895244;SGB=19.1209;VDB=0.102301;EFF=INTRON(MODIFIER||||516|LOC_Os03g62270|protein_coding|CODING|LOC_Os03g62270.1|1|1) FN1015-S.SNP.3:35276356 chr03:035276356 0 W/35276356-35276356 FN1015-S Single Base Substitution T-A INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3676-S.SNP.3:35282163 chr03:035282163 0 W/35282163-35282163 FN3676-S SNP A -> T AC=1;AN=190;BQB=0.988072;DP=3090;DP4=1562,1308,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34505e-07;MQSB=0.790226;RPB=0.975273;SGB=21.1058;VDB=0.66762;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.3:35282164 chr03:035282164 0 W/35282164-35282164 FN3311-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN2102-S.SNP.3:35283737 chr03:035283737 0 W/35283737-35283737 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.000259889;DP=3951;DP4=1951,1945,16,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42111e-07;MQSB=0.97342;RPB=0.23992;SGB=-172.198;VDB=0.173832;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.3:35284160 chr03:035284160 0 W/35284160-35284160 FN1380-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2729-S.SNP.3:35288532 chr03:035288532 0 W/35288532-35288532 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.901617;DP=4752;DP4=2198,2255,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24652e-14;MQSB=0.999997;RPB=0.903902;SGB=118.737;VDB=0.0203501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.3:35288769 chr03:035288769 0 W/35288769-35288769 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.996899;DP=4914;DP4=2586,2042,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.74228e-14;MQSB=0.950161;RPB=0.238249;SGB=83.5316;VDB=0.419864;EFF=UTR_3_PRIME(MODIFIER||112||103|LOC_Os03g62290|protein_coding|CODING|LOC_Os03g62290.1|1|1) FN1429-S.SNP.3:35289354 chr03:035289354 0 W/35289354-35289354 FN1429-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3793-S.SNP.3:35289363 chr03:035289363 0 W/35289363-35289363 FN3793-S SNP C -> T AC=1;AN=190;BQB=0.026827;DP=3448;DP4=1328,1889,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.288e-09;MQSB=0.54373;RPB=0.9659;SGB=-64.6575;VDB=0.612282;EFF=UTR_5_PRIME(MODIFIER||171||103|LOC_Os03g62290|protein_coding|CODING|LOC_Os03g62290.1|1|1) FN2553-S.SNP.3:35298996 chr03:035298996 0 W/35298996-35298996 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.372174;DP=4010;DP4=1613,2173,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0445e-15;MQSB=0.931075;RPB=0.983931;SGB=50.1053;VDB=0.630495;EFF=INTRON(MODIFIER||||365|LOC_Os03g62300|protein_coding|CODING|LOC_Os03g62300.1|7|1) FN1363-S.SNP.3:35302567 chr03:035302567 0 W/35302567-35302567 FN1363-S Single Base Substitution C-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN618-S.SNP.3:35310548 chr03:035310548 0 W/35310548-35310548 FN618-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g62330 expressed protein SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN2532-S.SNP.3:35310576 chr03:035310576 0 W/35310576-35310576 FN2532-S SNP T -> C AC=1;AN=198;BQB=0.981655;DP=3493;DP4=1483,1628,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07122e-07;MQSB=0.887252;RPB=0.324797;SGB=36.5539;VDB=0.553116;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A52|140|LOC_Os03g62330|protein_coding|CODING|LOC_Os03g62330.1|1|1) FN2532-S.SNP.3:35310578 chr03:035310578 0 W/35310578-35310578 FN2532-S SNP C -> G AC=1;AN=198;BQB=0.945723;DP=3477;DP4=1496,1705,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.53522e-06;MQSB=0.940368;RPB=0.208012;SGB=18.9639;VDB=0.530344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A52P|140|LOC_Os03g62330|protein_coding|CODING|LOC_Os03g62330.1|1|1) FN1623-S.SNP.3:35311212 chr03:035311212 0 W/35311212-35311212 FN1623-S Single Base Substitution C-A INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2558-S.SNP.3:35325991 chr03:035325991 0 W/35325991-35325991 FN2558-S SNP C -> T AC=1;AN=198;BQB=0.247159;DP=3453;DP4=1715,1483,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.161888;MQB=0.911781;MQSB=0;RPB=0.875544;SGB=7.75428;VDB=0.997054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.3:35329786 chr03:035329786 0 W/35329786-35329786 FN2535-S SNP G -> A AC=1;AN=198;BQB=0.250806;DP=3519;DP4=1665,1667,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.6135e-08;MQSB=0.997469;RPB=0.841917;SGB=32.9588;VDB=0.554125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.3:35331091 chr03:035331091 0 W/35331091-35331091 FN1256-S Single Base Substitution G-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1638-S.SNP.3:35352370 chr03:035352370 0 W/35352370-35352370 FN1638-S Single Base Substitution A-C INTRON HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1336-S.SNP.3:35364912 chr03:035364912 0 W/35364912-35364912 FN1336-S Single Base Substitution G-A INTRON HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN762-S.SNP.3:35382698 chr03:035382698 0 W/35382698-35382698 FN762-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1062-S.SNP.3:35386450 chr03:035386450 0 W/35386450-35386450 FN1062-S Single Base Substitution T-G INTRON HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1096-S.SNP.3:35394178 chr03:035394178 0 W/35394178-35394178 FN1096-S Single Base Substitution T-C INTRON HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN-296.SNP.3:35421346 chr03:035421346 0 W/35421346-35421346 FN-296 Single Base Substitution C-G INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-30.SNP.3:35423128 chr03:035423128 0 W/35423128-35423128 FN-30 Single Base Substitution A-C INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN-30.SNP.3:35423129 chr03:035423129 0 W/35423129-35423129 FN-30 Single Base Substitution C-A INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN1113-S.SNP.3:35426068 chr03:035426068 0 W/35426068-35426068 FN1113-S Single Base Substitution C-T INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN590-S.SNP.3:35429939 chr03:035429939 0 W/35429939-35429939 FN590-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os03g62590 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN945-S.SNP.3:35431914 chr03:035431914 0 W/35431914-35431914 FN945-S Single Base Substitution G-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2742-S.SNP.3:35439009 chr03:035439009 0 W/35439009-35439009 FN2742-S SNP G -> C AC=1;AN=200;BQB=0.469199;DP=4834;DP4=2299,2310,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.81593e-12;MQSB=0.99919;RPB=0.987695;SGB=69.1109;VDB=0.55876;EFF=INTRON(MODIFIER||||288|LOC_Os03g62610|protein_coding|CODING|LOC_Os03g62610.1|6|1) FN3778-S.SNP.3:35442829 chr03:035442829 0 W/35442829-35442829 FN3778-S SNP G -> T AC=1;AN=190;BQB=0.971274;DP=3248;DP4=1410,1730,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.55918e-13;MQSB=0.983093;RPB=0.869606;SGB=85.5263;VDB=0.997446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P146T|316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P146T|316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P146T|316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.3|1|1) FN4164-S.SNP.3:35443399 chr03:035443399 0 W/35443399-35443399 FN4164-S SNP G -> A AC=1;AN=170;BQB=1;DP=2973;DP4=1481,1409,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.7952e-10;MQSB=0.999352;RPB=0.579616;SGB=45.206;VDB=0.492772;EFF=UTR_5_PRIME(MODIFIER||135||316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.3|1|1),INTRON(MODIFIER||||316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.4|1|1),INTRON(MODIFIER||||316|LOC_Os03g62620|protein_coding|CODING|LOC_Os03g62620.2|1|1) FN409-S.SNP.3:35444403 chr03:035444403 0 W/35444403-35444403 FN409-S Single Base Substitution T-C INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3658-S.SNP.3:35448022 chr03:035448022 0 W/35448022-35448022 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.641125;DP=3100;DP4=1446,1474,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01067e-06;MQSB=0.990059;RPB=0.981922;SGB=21.1058;VDB=0.185218;EFF=UTR_3_PRIME(MODIFIER||31||329|LOC_Os03g62640|protein_coding|CODING|LOC_Os03g62640.3|10|1),INTRON(MODIFIER||||406|LOC_Os03g62640|protein_coding|CODING|LOC_Os03g62640.2|10|1),INTRON(MODIFIER||||321|LOC_Os03g62640|protein_coding|CODING|LOC_Os03g62640.4|10|1),INTRON(MODIFIER||||236|LOC_Os03g62640|protein_coding|CODING|LOC_Os03g62640.5|9|1) FN-102.SNP.3:35471044 chr03:035471044 0 W/35471044-35471044 FN-102 Single Base Substitution C-A INTRON HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN824-S.SNP.3:35471916 chr03:035471916 0 W/35471916-35471916 FN824-S Single Base Substitution A-C INTRON HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2758-S.SNP.3:35476277 chr03:035476277 0 W/35476277-35476277 FN2758-S SNP T -> C AC=1;AN=200;BQB=0.785242;DP=5061;DP4=2476,2292,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19165e-11;MQSB=0.849105;RPB=0.326853;SGB=42.5108;VDB=0.54989;EFF=UTR_3_PRIME(MODIFIER||76||702|LOC_Os03g62690|protein_coding|CODING|LOC_Os03g62690.2|1|1),INTRON(MODIFIER||||1253|LOC_Os03g62690|protein_coding|CODING|LOC_Os03g62690.1|1|1) FN3562-S.SNP.3:35477253 chr03:035477253 0 W/35477253-35477253 FN3562-S SNP A -> G AC=1;AN=188;BQB=0.863854;DP=2695;DP4=1238,1349,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30152e-10;MQSB=0.9779;RPB=0.0996809;SGB=14.798;VDB=0.0211632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N853D|1253|LOC_Os03g62690|protein_coding|CODING|LOC_Os03g62690.1|5|1),UTR_3_PRIME(MODIFIER||1052||702|LOC_Os03g62690|protein_coding|CODING|LOC_Os03g62690.2|4|1) FN3548-S.SNP.3:35487158 chr03:035487158 0 W/35487158-35487158 FN3548-S SNP C -> T AC=1;AN=188;BQB=0.962791;DP=3184;DP4=1680,1391,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00125628;MQB=5.07719e-07;MQSB=0.759442;RPB=0.998116;SGB=32.441;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.3:35487584 chr03:035487584 0 W/35487584-35487584 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.861031;DP=1362;DP4=403,913,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0535977;MQB=0.232032;MQSB=1.75924e-24;RPB=0.864638;SGB=2.45162;VDB=0.601656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.3:35488300 chr03:035488300 0 W/35488300-35488300 FN3697-S SNP C -> T AC=1;AN=190;BQB=0.210072;DP=2676;DP4=1593,981,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0683857;MQB=0.722857;MQSB=0.161779;RPB=0.960776;SGB=-0.550503;VDB=0.980758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.3:35490320 chr03:035490320 0 W/35490320-35490320 FN1685-S SNP A -> T AC=1;AN=188;BQB=0.999988;DP=2950;DP4=1489,1424,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.257627;MQB=0.993716;MQSB=0.782518;RPB=0.616969;SGB=28.6195;VDB=0.19943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.3:35493662 chr03:035493662 0 W/35493662-35493662 FN2229-S SNP C -> T AC=1;AN=190;BQB=0.700212;DP=4625;DP4=2059,2240,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000216216;MQB=9.39838e-16;MQSB=0.971986;RPB=0.865355;SGB=149.281;VDB=0.427895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.3:35495343 chr03:035495343 0 W/35495343-35495343 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.952002;DP=4814;DP4=2266,2380,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62213e-08;MQSB=0.813442;RPB=0.496804;SGB=36.6644;VDB=0.133035;EFF=INTRON(MODIFIER||||260|LOC_Os03g62720|protein_coding|CODING|LOC_Os03g62720.1|1|1),INTRON(MODIFIER||||247|LOC_Os03g62720|protein_coding|CODING|LOC_Os03g62720.2|1|1),INTRON(MODIFIER||||166|LOC_Os03g62720|protein_coding|CODING|LOC_Os03g62720.3|1|1) FN2715-S.SNP.3:35498280 chr03:035498280 0 W/35498280-35498280 FN2715-S SNP G -> T AC=1;AN=200;BQB=0.968589;DP=4991;DP4=2293,2367,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26437e-17;MQSB=0.744234;RPB=0.80773;SGB=52.9314;VDB=0.992465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.3:35498293 chr03:035498293 0 W/35498293-35498293 FN2715-S SNP T -> A AC=1;AN=200;BQB=0.695831;DP=4990;DP4=2243,2456,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.52671e-17;MQSB=0.87273;RPB=0.603609;SGB=52.9314;VDB=0.971839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.3:35501799 chr03:035501799 0 W/35501799-35501799 FN3793-S SNP C -> T AC=1;AN=190;BQB=0.986466;DP=2689;DP4=1288,1319,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33673e-05;MQSB=0.999524;RPB=0.119295;SGB=18.3316;VDB=0.410322;EFF=INTRON(MODIFIER||||517|LOC_Os03g62730|protein_coding|CODING|LOC_Os03g62730.1|3|1),INTRON(MODIFIER||||517|LOC_Os03g62730|protein_coding|CODING|LOC_Os03g62730.2|3|1),INTRON(MODIFIER||||517|LOC_Os03g62730|protein_coding|CODING|LOC_Os03g62730.3|3|1) FN1403-S.SNP.3:35503209 chr03:035503209 0 W/35503209-35503209 FN1403-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN3842-S.SNP.3:35508446 chr03:035508446 0 W/35508446-35508446 FN3842-S SNP A -> G AC=2;AN=190;BQB=0.95979;DP=2645;DP4=1226,1312,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.67614e-14;MQSB=0.999899;RPB=0.987456;SGB=94.6341;VDB=0.612282;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.3:35508564 chr03:035508564 0 W/35508564-35508564 FN-99 Single Base Substitution G-A INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1228-S.SNP.3:35510681 chr03:035510681 0 W/35510681-35510681 FN1228-S Single Base Substitution C-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. W472-5-1.SNP.3:35511042 chr03:035511042 0 W/35511042-35511042 W472-5-1 Single Base Substitution G-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3345-S.SNP.3:35512115 chr03:035512115 0 W/35512115-35512115 FN3345-S SNP G -> A AC=2;AN=184;BQB=0.711439;DP=2626;DP4=1231,1228,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000380807;MQB=1.15662e-13;MQSB=0.994317;RPB=0.867031;SGB=95.6183;VDB=0.753758;EFF=INTRON(MODIFIER||||510|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.1|1|1),INTRON(MODIFIER||||355|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.2|1|1),INTRON(MODIFIER||||372|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.3|1|1),INTRON(MODIFIER||||489|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.4|1|1) FN1712-S.SNP.3:35515810 chr03:035515810 0 W/35515810-35515810 FN1712-S SNP T -> C AC=1;AN=188;BQB=0.781733;DP=4188;DP4=2013,2134,17,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.48682e-14;MQSB=0.901852;RPB=0.986193;SGB=-8.48022;VDB=0.707408;EFF=INTRON(MODIFIER||||510|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.1|8|1),INTRON(MODIFIER||||355|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.2|8|1),INTRON(MODIFIER||||372|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.3|9|1),INTRON(MODIFIER||||489|LOC_Os03g62750|protein_coding|CODING|LOC_Os03g62750.4|8|1) FN1382-S.SNP.3:35517792 chr03:035517792 0 W/35517792-35517792 FN1382-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os03g62760 expressed protein SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2356.SNP.3:35527131 chr03:035527131 0 W/35527131-35527131 FN2356 SNP C -> T AC=1;AN=192;BQB=0.741595;DP=4517;DP4=1809,2503,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.21876e-07;MQSB=0.564187;RPB=0.932588;SGB=36.2157;VDB=0.289336;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.3:35528478 chr03:035528478 0 W/35528478-35528478 FN1383-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2151-S.SNP.3:35530334 chr03:035530334 0 W/35530334-35530334 FN2151-S SNP T -> C AC=1;AN=168;BQB=0.375756;DP=1715;DP4=705,946,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.111953;MQB=0.0558345;MQSB=0.00317803;RPB=0.25521;SGB=-0.101747;VDB=0.456033;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E537|756|LOC_Os03g62800|protein_coding|CODING|LOC_Os03g62800.1|2|1) FN3915-S.SNP.3:35530880 chr03:035530880 0 W/35530880-35530880 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.664382;DP=3553;DP4=1530,1896,7,13;HOB=8.01154e-05;ICB=0.000161245;MQ=16;MQ0F=0.487757;MQB=0.183213;MQSB=0;RPB=0.212605;SGB=33.2965;VDB=0.387944;EFF=INTRON(MODIFIER||||756|LOC_Os03g62800|protein_coding|CODING|LOC_Os03g62800.1|1|1) FN-335.SNP.3:35538309 chr03:035538309 0 W/35538309-35538309 FN-335 Single Base Substitution G-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2637-S.SNP.3:35544934 chr03:035544934 0 W/35544934-35544934 FN2637-S SNP T -> A AC=1;AN=200;BQB=0.96342;DP=5192;DP4=2669,2350,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92027e-13;MQSB=0.979295;RPB=0.832676;SGB=17.5158;VDB=0.600853;EFF=INTRON(MODIFIER||||574|LOC_Os03g62830|protein_coding|CODING|LOC_Os03g62830.1|4|1) FN2102-S.SNP.3:35548945 chr03:035548945 0 W/35548945-35548945 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.234336;DP=3364;DP4=1600,1708,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000297265;MQB=2.3126e-07;MQSB=0.976971;RPB=0.601571;SGB=-90.3546;VDB=0.189866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.3:35549907 chr03:035549907 0 W/35549907-35549907 FN1281-S Single Base Substitution A-G INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN706-S.SNP.3:35551044 chr03:035551044 0 W/35551044-35551044 FN706-S Single Base Substitution T-C INTRON HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3992-S.SNP.3:35566492 chr03:035566492 0 W/35566492-35566492 FN3992-S SNP A -> G AC=1;AN=168;BQB=0.950204;DP=2696;DP4=1191,1267,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.17875e-09;MQSB=0.77527;RPB=0.978825;SGB=-15.8033;VDB=0.943174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.3:35571612 chr03:035571612 0 W/35571612-35571612 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.986105;DP=2093;DP4=893,1121,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.83192e-05;MQSB=0.993902;RPB=0.997589;SGB=21.8853;VDB=0.975839;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.3:35572389 chr03:035572389 0 W/35572389-35572389 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.745563;DP=3864;DP4=1960,1690,24,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.47666e-22;MQSB=0.99722;RPB=0.973497;SGB=94.2223;VDB=0.934342;EFF=INTRON(MODIFIER||||202|LOC_Os03g62880|protein_coding|CODING|LOC_Os03g62880.1|1|1) FN3714-S.SNP.3:35576413 chr03:035576413 0 W/35576413-35576413 FN3714-S SNP C -> G AC=1;AN=190;BQB=0.931989;DP=2850;DP4=1388,1403,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41126e-09;MQSB=0.989346;RPB=0.932451;SGB=39.6545;VDB=0.177391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.3:35587572 chr03:035587572 0 W/35587572-35587572 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.99511;DP=4456;DP4=2231,2003,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.33595e-06;MQSB=0.456273;RPB=0.181186;SGB=8.64371;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.3:35589201 chr03:035589201 0 W/35589201-35589201 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2337.SNP.3:35589667 chr03:035589667 0 W/35589667-35589667 FN2337 SNP C -> A AC=1;AN=192;BQB=0.0541134;DP=4703;DP4=1743,2455,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03879e-07;MQSB=0.838241;RPB=0.215775;SGB=-13.0756;VDB=0.422638;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.3:35590075 chr03:035590075 0 W/35590075-35590075 FN858-S Single Base Substitution C-G INTRON HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3551-S.SNP.3:35599337 chr03:035599337 0 W/35599337-35599337 FN3551-S SNP A -> G AC=1;AN=188;BQB=0.576618;DP=2763;DP4=1277,1398,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000507394;MQSB=0.980999;RPB=0.983374;SGB=21.8113;VDB=0.692532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.3:35606611 chr03:035606611 0 W/35606611-35606611 FN3958-S SNP A -> T AC=1;AN=168;BQB=0.559231;DP=2582;DP4=1291,1166,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.29607e-09;MQSB=0.777572;RPB=0.922389;SGB=39.2004;VDB=0.701705;EFF=UTR_3_PRIME(MODIFIER||504||171|LOC_Os03g62950|protein_coding|CODING|LOC_Os03g62950.1|2|1) FN3626-S.SNP.3:35613889 chr03:035613889 0 W/35613889-35613889 FN3626-S SNP C -> T AC=2;AN=190;BQB=0.683598;DP=2897;DP4=1264,1499,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.46762e-15;MQSB=0.960789;RPB=0.804016;SGB=74.7373;VDB=0.345711;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.3:35621376 chr03:035621376 0 W/35621376-35621376 FN935-S Single Base Substitution G-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN498-S.SNP.3:35621625 chr03:035621625 0 W/35621625-35621625 FN498-S Single Base Substitution C-G INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN-252.SNP.3:35625054 chr03:035625054 0 W/35625054-35625054 FN-252 Single Base Substitution C-G INTERGENIC HOMO SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2656-S.SNP.3:35625244 chr03:035625244 0 W/35625244-35625244 FN2656-S SNP A -> G AC=1;AN=200;BQB=0.993786;DP=4100;DP4=1932,1900,13,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000243902;MQB=2.07172e-20;MQSB=0.210989;RPB=0.558512;SGB=123.188;VDB=0.88073;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.3:35625782 chr03:035625782 0 W/35625782-35625782 FN818-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN1722-S.SNP.3:35629597 chr03:035629597 0 W/35629597-35629597 FN1722-S SNP A -> G AC=1;AN=188;BQB=0.994564;DP=3978;DP4=1781,2150,16,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8567e-14;MQSB=0.870197;RPB=0.213478;SGB=27.1443;VDB=0.00961618;EFF=UTR_3_PRIME(MODIFIER||2867||154|LOC_Os03g63010|protein_coding|CODING|LOC_Os03g63010.1|5|1),UTR_3_PRIME(MODIFIER||2867||154|LOC_Os03g63010|protein_coding|CODING|LOC_Os03g63010.2|6|1) FN-279.SNP.3:35633215 chr03:035633215 0 W/35633215-35633215 FN-279 Single Base Substitution A-G INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3658-S.SNP.3:35654373 chr03:035654373 0 W/35654373-35654373 FN3658-S SNP T -> A AC=1;AN=190;BQB=0.93747;DP=3395;DP4=1596,1639,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.10748e-05;MQSB=0.88002;RPB=0.989026;SGB=14.7784;VDB=0.770878;EFF=INTRON(MODIFIER||||131|LOC_Os03g63050|protein_coding|CODING|LOC_Os03g63050.1|1|1) FN2372.SNP.3:35660222 chr03:035660222 0 W/35660222-35660222 FN2372 SNP A -> C AC=2;AN=192;BQB=0.602532;DP=5320;DP4=2634,2336,20,41;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.46923e-30;MQSB=0.993956;RPB=0.0235395;SGB=207.304;VDB=0.17639;EFF=UTR_3_PRIME(MODIFIER||579||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|9|1),UTR_3_PRIME(MODIFIER||579||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|2|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|9|1) FN2231-S.SNP.3:35662989 chr03:035662989 0 W/35662989-35662989 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.98515;DP=5064;DP4=2079,2518,7,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.52891e-12;MQSB=0.217389;RPB=0.999258;SGB=-105.883;VDB=0.418165;EFF=UTR_5_PRIME(MODIFIER||626||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|1|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|7|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|7|1) FN2231-S.SNP.3:35662990 chr03:035662990 0 W/35662990-35662990 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.516451;DP=5056;DP4=2101,2465,6,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23579e-13;MQSB=0.304113;RPB=0.523817;SGB=16.5421;VDB=0.678474;EFF=UTR_5_PRIME(MODIFIER||627||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|1|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|7|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|7|1) FN2307.SNP.3:35663492 chr03:035663492 0 W/35663492-35663492 FN2307 SNP G -> A AC=1;AN=192;BQB=0.999655;DP=5337;DP4=2869,2123,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000374742;MQB=1.06458e-17;MQSB=0.759993;RPB=0.522072;SGB=62.2505;VDB=0.0680606;EFF=UTR_5_PRIME(MODIFIER||1129||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|1|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|7|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|7|1) FN2648-S.SNP.3:35663492 chr03:035663492 0 W/35663492-35663492 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.383793;DP=5113;DP4=2644,2200,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97795e-12;MQSB=0.999841;RPB=0.733751;SGB=100.316;VDB=0.854873;EFF=UTR_5_PRIME(MODIFIER||1129||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|1|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|7|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|7|1) FN4201-S.SNP.3:35663492 chr03:035663492 0 W/35663492-35663492 FN4201-S SNP G -> A AC=2;AN=170;BQB=0.799605;DP=2921;DP4=1670,1166,19,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.14747e-17;MQSB=0.927536;RPB=0.74879;SGB=118.955;VDB=0.83572;EFF=UTR_5_PRIME(MODIFIER||1129||520|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.3|1|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.1|7|1),INTRON(MODIFIER||||1100|LOC_Os03g63074|protein_coding|CODING|LOC_Os03g63074.2|7|1) FN-187.SNP.3:35705077 chr03:035705077 0 W/35705077-35705077 FN-187 Single Base Substitution A-G INTRON HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN836-S.SNP.3:35710018 chr03:035710018 0 W/35710018-35710018 FN836-S Single Base Substitution T-C INTRON HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2200-S.SNP.3:35715774 chr03:035715774 0 W/35715774-35715774 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.845521;DP=4579;DP4=1947,2308,15,21;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000436777;MQB=4.21077e-06;MQSB=0.369802;RPB=0.992821;SGB=36.7425;VDB=0.581407;EFF=START_LOST(HIGH|MISSENSE|atG/atA|M1I|1317|LOC_Os03g63200|protein_coding|CODING|LOC_Os03g63200.1|1|1);LOF=(LOC_Os03g63200|LOC_Os03g63200|1|1.00) FN2354.SNP.3:35716051 chr03:035716051 0 W/35716051-35716051 FN2354 SNP C -> T AC=1;AN=192;BQB=0.429473;DP=4717;DP4=2414,1959,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.5877e-09;MQSB=0.482247;RPB=0.853381;SGB=15.1765;VDB=0.925794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.3:35717388 chr03:035717388 0 W/35717388-35717388 FN1692-S SNP T -> A AC=1;AN=188;BQB=0.11362;DP=3902;DP4=2167,1604,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.90815e-06;MQSB=0.984753;RPB=0.951297;SGB=-203.962;VDB=0.0479141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.3:35719744 chr03:035719744 0 W/35719744-35719744 FN3893-S SNP T -> C AC=1;AN=158;BQB=0.985921;DP=2521;DP4=1088,1318,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22871e-10;MQSB=0.936799;RPB=0.771243;SGB=64.5449;VDB=0.694045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V205A|225|LOC_Os03g63210|protein_coding|CODING|LOC_Os03g63210.1|2|1) FN3893-S.SNP.3:35719747 chr03:035719747 0 W/35719747-35719747 FN3893-S SNP G -> A AC=1;AN=158;BQB=0.965084;DP=2507;DP4=1085,1342,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.77613e-10;MQSB=0.975518;RPB=0.803847;SGB=47.5512;VDB=0.66799;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R206H|225|LOC_Os03g63210|protein_coding|CODING|LOC_Os03g63210.1|2|1) FN2607-S.SNP.3:35723283 chr03:035723283 0 W/35723283-35723283 FN2607-S SNP A -> G AC=1;AN=198;BQB=0.67185;DP=4400;DP4=2307,1917,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.38472e-09;MQSB=0.995976;RPB=0.99443;SGB=50.9344;VDB=0.958937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.3:35725724 chr03:035725724 0 W/35725724-35725724 FN1319-S Single Base Substitution A-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN3391-S.SNP.3:35731709 chr03:035731709 0 W/35731709-35731709 FN3391-S SNP A -> G AC=1;AN=184;BQB=0.834845;DP=3574;DP4=1906,1478,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14507e-08;MQSB=0.978004;RPB=0.784727;SGB=6.80232;VDB=0.571254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I137T|740|LOC_Os03g63240|protein_coding|CODING|LOC_Os03g63240.1|1|1) FN2360.SNP.3:35747177 chr03:035747177 0 W/35747177-35747177 FN2360 SNP C -> T AC=1;AN=192;BQB=0.559013;DP=5172;DP4=2613,2268,17,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2555e-15;MQSB=0.452659;RPB=0.594525;SGB=-7.9965;VDB=0.288084;EFF=UTR_3_PRIME(MODIFIER||339||684|LOC_Os03g63260|protein_coding|CODING|LOC_Os03g63260.1|2|1),UTR_3_PRIME(MODIFIER||339||684|LOC_Os03g63260|protein_coding|CODING|LOC_Os03g63260.2|3|1),UTR_3_PRIME(MODIFIER||339||684|LOC_Os03g63260|protein_coding|CODING|LOC_Os03g63260.3|2|1) FN1345-S.SNP.3:35753690 chr03:035753690 0 W/35753690-35753690 FN1345-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN4112-S.SNP.3:35755483 chr03:035755483 0 W/35755483-35755483 FN4112-S SNP G -> A AC=2;AN=182;BQB=0.952134;DP=2900;DP4=1438,1397,16,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.69894e-15;MQSB=0.911084;RPB=0.985931;SGB=77.758;VDB=0.195663;EFF=INTRON(MODIFIER||||391|LOC_Os03g63270|protein_coding|CODING|LOC_Os03g63270.1|1|1) FN2177-S.SNP.3:35757661 chr03:035757661 0 W/35757661-35757661 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.163128;DP=3030;DP4=1623,1357,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.52702e-06;MQSB=0.981287;RPB=0.283848;SGB=9.91396;VDB=0.661628;EFF=UTR_3_PRIME(MODIFIER||11||391|LOC_Os03g63270|protein_coding|CODING|LOC_Os03g63270.1|3|1) FN419-S.SNP.3:35758403 chr03:035758403 0 W/35758403-35758403 FN419-S Single Base Substitution T-C INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN960-S.SNP.3:35763067 chr03:035763067 0 W/35763067-35763067 FN960-S Single Base Substitution C-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN3343-S.SNP.3:35763256 chr03:035763256 0 W/35763256-35763256 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.465915;DP=2251;DP4=961,1217,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24539e-06;MQSB=0.992879;RPB=0.574381;SGB=-3.85014;VDB=0.543076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.3:35771373 chr03:035771373 0 W/35771373-35771373 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.989366;DP=2804;DP4=1322,1395,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.21578e-10;MQSB=0.878082;RPB=0.999578;SGB=62.3078;VDB=0.302961;EFF=INTRON(MODIFIER||||277|LOC_Os03g63290|protein_coding|CODING|LOC_Os03g63290.1|2|1) FN4231-S.SNP.3:35772339 chr03:035772339 0 W/35772339-35772339 FN4231-S SNP T -> A AC=2;AN=170;BQB=0.841846;DP=2714;DP4=1201,1390,11,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.03893e-16;MQSB=0.755581;RPB=0.822724;SGB=136.725;VDB=0.115869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.3:35772340 chr03:035772340 0 W/35772340-35772340 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.99719;DP=4985;DP4=2384,2394,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.34535e-13;MQSB=0.395022;RPB=0.682031;SGB=45.1159;VDB=0.346881;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.3:35772349 chr03:035772349 0 W/35772349-35772349 W466-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2218-S.SNP.3:35777781 chr03:035777781 0 W/35777781-35777781 FN2218-S SNP A -> T AC=1;AN=190;BQB=0.962241;DP=4433;DP4=1986,2239,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.09382e-05;MQSB=0.849137;RPB=0.757683;SGB=25.439;VDB=0.913584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.3:35788386 chr03:035788386 0 W/35788386-35788386 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.105543;DP=5034;DP4=2401,2243,27,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28208e-28;MQSB=0.999902;RPB=0.493515;SGB=181.81;VDB=0.0970395;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.3:35791502 chr03:035791502 0 W/35791502-35791502 FN1234-S Single Base Substitution G-T INTRON HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN-344.SNP.3:35791825 chr03:035791825 0 W/35791825-35791825 FN-344 Single Base Substitution T-C INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3828-S.SNP.3:35798150 chr03:035798150 0 W/35798150-35798150 FN3828-S SNP T -> A AC=1;AN=190;BQB=0.968798;DP=3053;DP4=1334,1496,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.93578e-09;MQSB=0.764498;RPB=0.566397;SGB=36.1006;VDB=0.186426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.3:35798151 chr03:035798151 0 W/35798151-35798151 FN3828-S SNP T -> A AC=1;AN=190;BQB=0.904846;DP=3053;DP4=1324,1449,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.82626e-11;MQSB=0.567681;RPB=0.495484;SGB=-13.222;VDB=0.606666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.3:35809779 chr03:035809779 0 W/35809779-35809779 FN3906-S SNP G -> A AC=1;AN=158;BQB=0.954847;DP=2676;DP4=1150,1409,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.99951e-06;MQSB=0.972672;RPB=0.209912;SGB=20.5959;VDB=0.219792;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.3:35811679 chr03:035811679 0 W/35811679-35811679 FN-305 Single Base Substitution C-T INTRON HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3319-S.SNP.3:35813782 chr03:035813782 0 W/35813782-35813782 FN3319-S SNP A -> G AC=1;AN=184;BQB=0.997796;DP=2871;DP4=1439,1190,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0456287;MQB=0.45153;MQSB=0;RPB=0.0261627;SGB=-118.17;VDB=0.250139;EFF=INTRON(MODIFIER||||261|LOC_Os03g63370|protein_coding|CODING|LOC_Os03g63370.1|1|1) FN2568-S.SNP.3:35814272 chr03:035814272 0 W/35814272-35814272 FN2568-S SNP T -> C AC=1;AN=198;BQB=0.00622748;DP=4481;DP4=2129,2093,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000223164;MQB=0.000247445;MQSB=0.673432;RPB=0.949886;SGB=25.7687;VDB=0.356497;EFF=INTRON(MODIFIER||||261|LOC_Os03g63370|protein_coding|CODING|LOC_Os03g63370.1|1|1) FN_N1-220-1.SNP.3:35814829 chr03:035814829 0 W/35814829-35814829 FN_N1-220-1 Single Base Substitution G-A Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN2752-S.SNP.3:35816617 chr03:035816617 0 W/35816617-35816617 FN2752-S SNP A -> C AC=1;AN=200;BQB=0.827041;DP=4313;DP4=1973,2185,8,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.22555e-06;MQSB=0.971314;RPB=0.363084;SGB=33.0593;VDB=0.00440415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1501-S.SNP.3:35836669 chr03:035836669 0 W/35836669-35836669 FN1501-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN267-S.SNP.3:35842734 chr03:035842734 0 W/35842734-35842734 FN267-S Single Base Substitution T-A INTRON HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN1023-S.SNP.3:35845418 chr03:035845418 0 W/35845418-35845418 FN1023-S Single Base Substitution A-G INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3982-S.SNP.3:35845711 chr03:035845711 0 W/35845711-35845711 FN3982-S SNP G -> C AC=1;AN=168;BQB=0.875242;DP=2723;DP4=1326,1285,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40314e-10;MQSB=0.995836;RPB=0.299789;SGB=24.6155;VDB=0.323649;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.3:35857175 chr03:035857175 0 W/35857175-35857175 FN_807-3-1 Single Base Substitution T-C HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN-231.SNP.3:35859190 chr03:035859190 0 W/35859190-35859190 FN-231 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g63470 retrotransposon protein, putative, unclassified, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-231.SNP.3:35859191 chr03:035859191 0 W/35859191-35859191 FN-231 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-257.SNP.3:35863362 chr03:035863362 0 W/35863362-35863362 FN-257 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g63480 ankyrin repeat domain containing protein, expressed SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2767-S.SNP.3:35864305 chr03:035864305 0 W/35864305-35864305 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.838701;DP=4566;DP4=2102,2166,19,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.92023e-15;MQSB=0.999995;RPB=0.157746;SGB=25.3006;VDB=0.390331;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.3:35866211 chr03:035866211 0 W/35866211-35866211 FN1600-S Single Base Substitution G-A INTRON HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1570-S.SNP.3:35866589 chr03:035866589 0 W/35866589-35866589 FN1570-S Single Base Substitution A-T INTRON HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3377-S.SNP.3:35873303 chr03:035873303 0 W/35873303-35873303 FN3377-S SNP T -> A AC=1;AN=184;BQB=0.98684;DP=2585;DP4=1216,1269,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.68792e-06;MQSB=0.974266;RPB=0.285469;SGB=21.6609;VDB=0.431879;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S296C|613|LOC_Os03g63500|protein_coding|CODING|LOC_Os03g63500.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S296C|468|LOC_Os03g63500|protein_coding|CODING|LOC_Os03g63500.2|6|1) W598-2-1.SNP.3:35873754 chr03:035873754 0 W/35873754-35873754 W598-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN442-S.SNP.3:35875648 chr03:035875648 0 W/35875648-35875648 FN442-S Single Base Substitution A-G INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN2572-S.SNP.3:35875684 chr03:035875684 0 W/35875684-35875684 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.669967;DP=4011;DP4=2138,1663,16,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.52149e-22;MQSB=0.713386;RPB=0.327273;SGB=178.212;VDB=0.0622178;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.3:35891990 chr03:035891990 0 W/35891990-35891990 FN1430-S Single Base Substitution T-A INTRON HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2696-S.SNP.3:35894073 chr03:035894073 0 W/35894073-35894073 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.919667;DP=4947;DP4=2479,2216,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08779e-09;MQSB=0.686499;RPB=0.342011;SGB=15.9106;VDB=0.679966;EFF=UTR_3_PRIME(MODIFIER||460||303|LOC_Os03g63530|protein_coding|CODING|LOC_Os03g63530.2|4|1),UTR_3_PRIME(MODIFIER||460||303|LOC_Os03g63530|protein_coding|CODING|LOC_Os03g63530.1|5|1) FN2450.SNP.3:35902618 chr03:035902618 0 W/35902618-35902618 FN2450 SNP C -> G AC=1;AN=200;BQB=0.459329;DP=3726;DP4=1409,1870,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97398e-07;MQSB=0.920171;RPB=0.983704;SGB=40.2696;VDB=0.0714772;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R139|515|LOC_Os03g63560|protein_coding|CODING|LOC_Os03g63560.1|1|1) FN-181.SNP.3:35903866 chr03:035903866 0 W/35903866-35903866 FN-181 Single Base Substitution A-T INTERGENIC HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2731-S.SNP.3:35914759 chr03:035914759 0 W/35914759-35914759 FN2731-S SNP C -> G AC=2;AN=200;BQB=0.995979;DP=2965;DP4=1820,1011,16,9;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000337268;MQB=3.34798e-09;MQSB=1.55074e-12;RPB=0.829553;SGB=79.9264;VDB=0.00362486;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.3:35917314 chr03:035917314 0 W/35917314-35917314 FN4138-S SNP T -> G AC=1;AN=170;BQB=0.941126;DP=2204;DP4=984,1128,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.54781e-08;MQSB=0.934856;RPB=0.902614;SGB=47.8722;VDB=0.404704;EFF=INTRON(MODIFIER||||297|LOC_Os03g63600|protein_coding|CODING|LOC_Os03g63600.1|1|1) FN918-S.SNP.3:35920497 chr03:035920497 0 W/35920497-35920497 FN918-S Single Base Substitution T-C INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN4271-S.SNP.3:35920510 chr03:035920510 0 W/35920510-35920510 FN4271-S SNP T -> G AC=1;AN=170;BQB=0.77091;DP=2368;DP4=1129,1165,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.46039e-07;MQSB=0.949369;RPB=0.965153;SGB=43.4296;VDB=0.830722;EFF=INTERGENIC(MODIFIER||||||||||1) FN444-S.SNP.3:35920872 chr03:035920872 0 W/35920872-35920872 FN444-S Single Base Substitution C-G INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2536-S.SNP.3:35923990 chr03:035923990 0 W/35923990-35923990 FN2536-S SNP A -> T AC=1;AN=198;BQB=0.76067;DP=4379;DP4=1979,2092,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.99943e-07;MQSB=0.613383;RPB=0.936375;SGB=49.5489;VDB=0.711292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.3:35925989 chr03:035925989 0 W/35925989-35925989 FN-264 Single Base Substitution A-T INTERGENIC HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN2588-S.SNP.3:35927017 chr03:035927017 0 W/35927017-35927017 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.794743;DP=4025;DP4=1996,1795,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.64815e-09;MQSB=0.00516021;RPB=0.576032;SGB=10.9445;VDB=0.914541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.3:35935233 chr03:035935233 0 W/35935233-35935233 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.683954;DP=3825;DP4=1788,1787,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00575163;MQB=7.65926e-06;MQSB=1.93914e-05;RPB=0.97652;SGB=77.1196;VDB=0.310678;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R975Q|1047|LOC_Os03g63640|protein_coding|CODING|LOC_Os03g63640.1|2|1) FN3943-S.SNP.3:35937224 chr03:035937224 0 W/35937224-35937224 FN3943-S SNP G -> A AC=2;AN=168;BQB=0.999999;DP=1760;DP4=1059,610,13,8;HOB=0.0235261;ICB=0.494119;MQ=25;MQ0F=0.201705;MQB=0.924845;MQSB=2.03427e-19;RPB=0.97589;SGB=62.1945;VDB=0.673092;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S342|1047|LOC_Os03g63640|protein_coding|CODING|LOC_Os03g63640.1|1|1) FN-232.SNP.3:35941022 chr03:035941022 0 W/35941022-35941022 FN-232 Single Base Substitution C-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1509-S.SNP.3:35941683 chr03:035941683 0 W/35941683-35941683 FN1509-S Single Base Substitution A-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1423-S.SNP.3:35945262 chr03:035945262 0 W/35945262-35945262 FN1423-S Single Base Substitution T-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2658-S.SNP.3:35945318 chr03:035945318 0 W/35945318-35945318 FN2658-S SNP G -> T AC=1;AN=200;BQB=0.950275;DP=4692;DP4=2449,2006,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.27481e-07;MQSB=0.859846;RPB=0.236994;SGB=40.4492;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.3:35946200 chr03:035946200 0 W/35946200-35946200 FN3323-S SNP A -> G AC=1;AN=184;BQB=0.985086;DP=3378;DP4=1590,1662,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.76974e-05;MQSB=0.985366;RPB=0.944972;SGB=10.6662;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.3:35967585 chr03:035967585 0 W/35967585-35967585 FN367-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3460-S.SNP.3:35987676 chr03:035987676 0 W/35987676-35987676 FN3460-S SNP C -> G AC=1;AN=184;BQB=0.98892;DP=3435;DP4=1239,2089,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.79308e-06;MQSB=0.983394;RPB=0.184257;SGB=28.7043;VDB=0.149309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.3:35989710 chr03:035989710 0 W/35989710-35989710 FN1140-S Single Base Substitution G-A INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4201-S.SNP.3:35991446 chr03:035991446 0 W/35991446-35991446 FN4201-S SNP T -> A AC=2;AN=170;BQB=0.597645;DP=2753;DP4=1376,1267,16,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.97092e-12;MQSB=0.956648;RPB=0.899784;SGB=110.069;VDB=0.748054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N269K|506|LOC_Os03g63750|protein_coding|CODING|LOC_Os03g63750.1|2|1) FN3944-S.SNP.3:35999192 chr03:035999192 0 W/35999192-35999192 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.956536;DP=3037;DP4=1665,1273,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.2816e-12;MQSB=0.964062;RPB=0.727103;SGB=36.7696;VDB=0.773423;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.3:36000761 chr03:036000761 0 W/36000761-36000761 FN-73 Single Base Substitution A-G INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN4032-S.SNP.3:36004759 chr03:036004759 0 W/36004759-36004759 FN4032-S SNP C -> T AC=1;AN=168;BQB=0.997583;DP=2988;DP4=1351,1521,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19178e-10;MQSB=0.998956;RPB=0.219541;SGB=7.05233;VDB=0.0409749;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.6|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.5|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G192R|584|LOC_Os03g63770|protein_coding|CODING|LOC_Os03g63770.2|1|1) FN2411.SNP.3:36010891 chr03:036010891 0 W/36010891-36010891 FN2411 SNP A -> G AC=1;AN=200;BQB=0.998143;DP=4434;DP4=2080,1890,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.08697e-14;MQSB=0.763788;RPB=0.981795;SGB=83.5316;VDB=0.658104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.3:36021755 chr03:036021755 0 W/36021755-36021755 FN2555-S SNP G -> T AC=1;AN=198;BQB=0.13388;DP=3927;DP4=1887,1850,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.174688;MQB=0.965233;MQSB=0.00696721;RPB=0.529395;SGB=14.1348;VDB=0.295216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V977F|2027|LOC_Os03g63790|protein_coding|CODING|LOC_Os03g63790.1|2|1) FN1340-S.SNP.3:36023330 chr03:036023330 0 W/36023330-36023330 FN1340-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os03g63790 retrotransposon protein, putative, unclassified, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3821-S.SNP.3:36030893 chr03:036030893 0 W/36030893-36030893 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.810958;DP=3031;DP4=1253,1499,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000280045;MQSB=0.96545;RPB=0.508859;SGB=53.6492;VDB=0.269079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.3:36031191 chr03:036031191 0 W/36031191-36031191 FN1389-S Single Base Substitution G-T INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2334.SNP.3:36036388 chr03:036036388 0 W/36036388-36036388 FN2334 SNP G -> A AC=1;AN=192;BQB=0.0135975;DP=5482;DP4=2641,2443,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.77972e-08;MQSB=0.881793;RPB=0.774555;SGB=-14.2043;VDB=0.567312;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.3:36051136 chr03:036051136 0 W/36051136-36051136 FN779-S Single Base Substitution C-T INTERGENIC HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3979-S.SNP.3:36053924 chr03:036053924 0 W/36053924-36053924 FN3979-S SNP C -> T AC=1;AN=168;BQB=0.999829;DP=2594;DP4=1443,1066,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.18686e-07;MQSB=0.904932;RPB=0.520411;SGB=34.748;VDB=0.769225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T585I|760|LOC_Os03g63820|protein_coding|CODING|LOC_Os03g63820.1|5|1) FN2668-S.SNP.3:36054416 chr03:036054416 0 W/36054416-36054416 FN2668-S SNP G -> A AC=2;AN=200;BQB=0.551173;DP=4916;DP4=2481,2055,26,31;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00447518;MQB=1.28058e-22;MQSB=1.62954e-08;RPB=0.579023;SGB=195.292;VDB=0.803731;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L716|760|LOC_Os03g63820|protein_coding|CODING|LOC_Os03g63820.1|6|1) FN4125-S.SNP.3:36055048 chr03:036055048 0 W/36055048-36055048 FN4125-S SNP T -> C AC=1;AN=182;BQB=0.907606;DP=3482;DP4=1745,1666,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0169443;MQB=1.63731e-05;MQSB=0.68135;RPB=0.952574;SGB=53.1331;VDB=0.400878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.3:36055377 chr03:036055377 0 W/36055377-36055377 FN-291 Single Base Substitution C-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2429.SNP.3:36056148 chr03:036056148 0 W/36056148-36056148 FN2429 SNP C -> T AC=1;AN=200;BQB=0.187931;DP=5341;DP4=2928,2067,25,24;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0181614;MQB=2.51723e-10;MQSB=1.40528e-39;RPB=0.853792;SGB=112.85;VDB=0.230365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G1309R|1413|LOC_Os03g63830|protein_coding|CODING|LOC_Os03g63830.1|5|1) FN571-S.SNP.3:36058685 chr03:036058685 0 W/36058685-36058685 FN571-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os03g63830 retrotransposon protein, putative, unclassified, expressed SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN677-S.SNP.3:36061928 chr03:036061928 0 W/36061928-36061928 FN677-S Single Base Substitution G-A INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3438-S.SNP.3:36063105 chr03:036063105 0 W/36063105-36063105 FN3438-S SNP T -> C AC=1;AN=184;BQB=0.574871;DP=1837;DP4=1216,558,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000255186;MQSB=0.815843;RPB=0.99556;SGB=30.6558;VDB=0.770293;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.3:36076155 chr03:036076155 0 W/36076155-36076155 FN1103-S Single Base Substitution C-T INTRON HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-268.SNP.3:36080939 chr03:036080939 0 W/36080939-36080939 FN-268 Single Base Substitution G-T INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3723-S.SNP.3:36087345 chr03:036087345 0 W/36087345-36087345 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.999589;DP=2729;DP4=1414,1228,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00293148;MQB=3.02744e-11;MQSB=0.213118;RPB=0.859442;SGB=68.0854;VDB=0.860353;EFF=INTRON(MODIFIER||||599|LOC_Os03g63870|protein_coding|CODING|LOC_Os03g63870.1|2|1),INTRON(MODIFIER||||569|LOC_Os03g63870|protein_coding|CODING|LOC_Os03g63870.2|2|1),INTRON(MODIFIER||||550|LOC_Os03g63870|protein_coding|CODING|LOC_Os03g63870.3|2|1) FN1024-S.SNP.3:36091007 chr03:036091007 0 W/36091007-36091007 FN1024-S Single Base Substitution C-T INTRON HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3732-S.SNP.3:36096922 chr03:036096922 0 W/36096922-36096922 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.293324;DP=2723;DP4=1290,1329,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000734484;MQB=2.71018e-05;MQSB=0.903172;RPB=0.61026;SGB=43.2083;VDB=0.0822528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3546-S.SNP.3:36098496 chr03:036098496 0 W/36098496-36098496 FN3546-S SNP A -> G AC=1;AN=188;BQB=0.651003;DP=3019;DP4=1658,1233,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000162434;MQSB=0.995397;RPB=0.840958;SGB=30.8063;VDB=0.603537;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.3:36102178 chr03:036102178 0 W/36102178-36102178 FN_809-6-1 Single Base Substitution C-T HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN3716-S.SNP.3:36102191 chr03:036102191 0 W/36102191-36102191 FN3716-S SNP T -> C AC=1;AN=190;BQB=0.954525;DP=2814;DP4=1391,1329,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.9506e-06;MQSB=0.994726;RPB=0.721323;SGB=35.4339;VDB=0.517352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.3:36110519 chr03:036110519 0 W/36110519-36110519 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.873386;DP=3954;DP4=1968,1728,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.68185e-07;MQSB=0.749545;RPB=0.715003;SGB=36.5539;VDB=0.388723;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G775|804|LOC_Os03g63910|protein_coding|CODING|LOC_Os03g63910.1|3|1) FN3844-S.SNP.3:36113949 chr03:036113949 0 W/36113949-36113949 FN3844-S SNP T -> A AC=1;AN=190;BQB=0.748602;DP=2278;DP4=1128,951,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11082e-08;MQSB=0.769496;RPB=0.469587;SGB=39.6545;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.3:36114674 chr03:036114674 0 W/36114674-36114674 FN1430-S Single Base Substitution G-A INTRON HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1190-S.SNP.3:36121188 chr03:036121188 0 W/36121188-36121188 FN1190-S Single Base Substitution A-T INTRON HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3829-S.SNP.3:36137404 chr03:036137404 0 W/36137404-36137404 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.960918;DP=2549;DP4=1101,1369,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000237866;MQSB=0.936571;RPB=0.944067;SGB=30.8803;VDB=0.935918;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.3:36148164 chr03:036148164 0 W/36148164-36148164 FN1379-S Single Base Substitution A-G INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN930-S.SNP.3:36154563 chr03:036154563 0 W/36154563-36154563 FN930-S Single Base Substitution A-T INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. W463-2-1.SNP.3:36164513 chr03:036164513 0 W/36164513-36164513 W463-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN734-S.SNP.3:36179892 chr03:036179892 0 W/36179892-36179892 FN734-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN1707-S.SNP.3:36180413 chr03:036180413 0 W/36180413-36180413 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.339965;DP=2193;DP4=1647,480,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000834786;MQSB=0.79691;RPB=0.352849;SGB=15.903;VDB=0.880398;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.3:36180964 chr03:036180964 0 W/36180964-36180964 FN302-S Single Base Substitution C-A INTRON HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2670-S.SNP.3:36191175 chr03:036191175 0 W/36191175-36191175 FN2670-S SNP C -> T AC=2;AN=200;BQB=0.937889;DP=4699;DP4=2409,1977,31,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6779e-36;MQSB=0.962973;RPB=0.374628;SGB=154.533;VDB=0.396707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.3:36195289 chr03:036195289 0 W/36195289-36195289 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.874473;DP=4775;DP4=2362,2093,1,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1698e-07;MQSB=0.967695;RPB=0.935786;SGB=25.849;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.3:36195444 chr03:036195444 0 W/36195444-36195444 FN2263-S SNP C -> A AC=1;AN=190;BQB=0.336875;DP=4921;DP4=2108,2459,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0514e-16;MQSB=0.978078;RPB=0.153859;SGB=59.414;VDB=0.693703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.3:36199618 chr03:036199618 0 W/36199618-36199618 FN3382-S SNP C -> T AC=2;AN=184;BQB=0.980732;DP=3662;DP4=1823,1686,20,17;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0169306;MQB=0.00116944;MQSB=3.48115e-28;RPB=0.205754;SGB=161.787;VDB=0.223477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.3:36199618 chr03:036199618 0 W/36199618-36199618 FN3809-S SNP C -> T AC=2;AN=190;BQB=0.140318;DP=3088;DP4=1587,1381,11,13;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0165155;MQB=0.744005;MQSB=6.33709e-24;RPB=0.88276;SGB=103.742;VDB=0.804086;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN-334 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-348.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN-348 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-83.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN-83 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1180-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN1180-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN2264-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN2264-S SNP A -> G AC=2;AN=190;BQB=0.00493829;DP=3886;DP4=1727,1563,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000257334;MQB=1.12463e-05;MQSB=0.998149;RPB=0.947692;SGB=-35.4322;VDB=0.970247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN2310.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN2310 SNP A -> G AC=2;AN=192;BQB=0.941357;DP=4401;DP4=1993,1824,21,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.79269e-25;MQSB=0.936405;RPB=0.723293;SGB=-101.828;VDB=0.781731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN2568-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN2568-S SNP A -> G AC=1;AN=198;BQB=0.999255;DP=3796;DP4=1892,1587,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.32226e-07;MQSB=0.593675;RPB=0.696199;SGB=9.3494;VDB=0.314481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN2629-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.126985;DP=4507;DP4=2190,1966,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.50952e-18;MQSB=0.840606;RPB=0.980953;SGB=36.7778;VDB=0.757129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN4047-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN4047-S SNP A -> G AC=2;AN=168;BQB=0.382928;DP=2474;DP4=1262,1066,10,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.76824e-14;MQSB=0.620001;RPB=0.955115;SGB=-8.91027;VDB=0.724659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN4151-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN4151-S SNP A -> G AC=2;AN=170;BQB=0.759504;DP=2428;DP4=1257,1063,9,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.04602e-13;MQSB=0.676657;RPB=0.0510942;SGB=58.9663;VDB=0.454463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K221E|246|LOC_Os03g64070|protein_coding|CODING|LOC_Os03g64070.1|1|1) FN989-S.SNP.3:36204771 chr03:036204771 0 W/36204771-36204771 FN989-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os03g64070 uncharacterized protein PA4923, putative, expressed SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1382-S.SNP.3:36206647 chr03:036206647 0 W/36206647-36206647 FN1382-S Single Base Substitution C-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN_1017-1.SNP.3:36206741 chr03:036206741 0 W/36206741-36206741 FN_1017-1 Single Base Substitution C-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN899-S.SNP.3:36208168 chr03:036208168 0 W/36208168-36208168 FN899-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN1709-S.SNP.3:36221114 chr03:036221114 0 W/36221114-36221114 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.137105;DP=3973;DP4=1821,2092,18,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.49623e-14;MQSB=0.999762;RPB=0.747346;SGB=27.1443;VDB=0.101212;EFF=INTRON(MODIFIER||||2074|LOC_Os03g64080|protein_coding|CODING|LOC_Os03g64080.1|3|1) FN1269-S.SNP.3:36225829 chr03:036225829 0 W/36225829-36225829 FN1269-S Single Base Substitution T-A INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2091-S.SNP.3:36232485 chr03:036232485 0 W/36232485-36232485 FN2091-S SNP G -> C AC=2;AN=168;BQB=0.528504;DP=3609;DP4=1611,1925,28,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.5366e-27;MQSB=0.98816;RPB=0.269772;SGB=-195.691;VDB=0.0483622;EFF=INTRON(MODIFIER||||444|LOC_Os03g64110|protein_coding|CODING|LOC_Os03g64110.1|9|1) FN3784-S.SNP.3:36249423 chr03:036249423 0 W/36249423-36249423 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.561504;DP=2653;DP4=1165,1414,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.26874e-06;MQSB=0.925508;RPB=0.705722;SGB=39.6545;VDB=0.324509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.3:36263983 chr03:036263983 0 W/36263983-36263983 FN3808-S SNP T -> G AC=1;AN=190;BQB=0.969389;DP=2534;DP4=1285,1151,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19409e-07;MQSB=0.996397;RPB=0.897916;SGB=44.5415;VDB=0.691466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.3:36271764 chr03:036271764 0 W/36271764-36271764 FN3678-S SNP G -> A AC=1;AN=190;BQB=0.753601;DP=2580;DP4=1271,1185,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.66232e-11;MQSB=0.996222;RPB=0.908931;SGB=33.8752;VDB=0.0644273;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.3:36279668 chr03:036279668 0 W/36279668-36279668 FN-141 Single Base Substitution G-A INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN2383.SNP.3:36285174 chr03:036285174 0 W/36285174-36285174 FN2383 SNP C -> T AC=1;AN=192;BQB=0.481659;DP=5260;DP4=2753,2207,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.69602e-14;MQSB=0.7456;RPB=0.99989;SGB=15.1765;VDB=0.854347;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.3:36288716 chr03:036288716 0 W/36288716-36288716 FN4064-S SNP A -> G AC=2;AN=168;BQB=0.93784;DP=2456;DP4=1104,1186,2,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.77144e-12;MQSB=0.805917;RPB=0.473024;SGB=83.1885;VDB=0.81942;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H103|302|LOC_Os03g64219|protein_coding|CODING|LOC_Os03g64219.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H103|251|LOC_Os03g64219|protein_coding|CODING|LOC_Os03g64219.3|2|1) FN840-S.SNP.3:36288790 chr03:036288790 0 W/36288790-36288790 FN840-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os03g64219 OTU-like cysteine protease family protein, putative, expressed SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3356-S.SNP.3:36289042 chr03:036289042 0 W/36289042-36289042 FN3356-S SNP A -> C AC=1;AN=184;BQB=0.999919;DP=2481;DP4=1009,1294,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.84758e-10;MQSB=0.988952;RPB=0.999018;SGB=56.8786;VDB=0.591143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L17R|251|LOC_Os03g64219|protein_coding|CODING|LOC_Os03g64219.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L17R|302|LOC_Os03g64219|protein_coding|CODING|LOC_Os03g64219.1|1|1) FN4172-S.SNP.3:36289856 chr03:036289856 0 W/36289856-36289856 FN4172-S SNP C -> A AC=2;AN=170;BQB=1;DP=2796;DP4=1556,1151,16,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.71016e-14;MQSB=0.664094;RPB=0.396099;SGB=76.1898;VDB=0.95446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.3:36291203 chr03:036291203 0 W/36291203-36291203 FN3356-S SNP A -> T AC=1;AN=184;BQB=0.995771;DP=2639;DP4=1205,1340,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.09415e-12;MQSB=0.999753;RPB=0.896935;SGB=56.8786;VDB=0.401387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.3:36295357 chr03:036295357 0 W/36295357-36295357 FN2273-S SNP G -> C AC=1;AN=190;BQB=0.356105;DP=3613;DP4=1793,1523,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.1197e-05;MQSB=0.0112668;RPB=0.985504;SGB=35.4339;VDB=0.501755;EFF=UTR_5_PRIME(MODIFIER||107||367|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.2|1|1),UTR_5_PRIME(MODIFIER||851||226|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.5|1|1),UTR_5_PRIME(MODIFIER||731||224|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.6|1|1) FN3921-S.SNP.3:36295792 chr03:036295792 0 W/36295792-36295792 FN3921-S SNP G -> A AC=2;AN=158;BQB=0.999998;DP=2108;DP4=1072,936,12,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.79534e-10;MQSB=0.962839;RPB=0.734076;SGB=33.2965;VDB=0.810281;EFF=SPLICE_SITE_REGION(LOW||||367|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.2|3|1),SPLICE_SITE_REGION(LOW||||226|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.5|3|1),SPLICE_SITE_REGION(LOW||||224|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.6|3|1),SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R55|367|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.2|3|1),UTR_5_PRIME(MODIFIER||416||226|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.5|3|1),UTR_5_PRIME(MODIFIER||296||224|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.6|3|1) FN2245-S.SNP.3:36297084 chr03:036297084 0 W/36297084-36297084 FN2245-S SNP T -> A AC=2;AN=190;BQB=0.549957;DP=5247;DP4=2253,2560,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44618e-14;MQSB=0.999333;RPB=0.86341;SGB=28.9731;VDB=0.112093;EFF=INTRON(MODIFIER||||367|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.2|5|1),INTRON(MODIFIER||||226|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.5|4|1),INTRON(MODIFIER||||224|LOC_Os03g64250|protein_coding|CODING|LOC_Os03g64250.6|5|1) FN588-S.SNP.3:36303762 chr03:036303762 0 W/36303762-36303762 FN588-S Single Base Substitution A-G INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN768-S.SNP.3:36305034 chr03:036305034 0 W/36305034-36305034 FN768-S Single Base Substitution G-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2627-S.SNP.3:36305338 chr03:036305338 0 W/36305338-36305338 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.977266;DP=4642;DP4=2004,2418,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.43936e-11;MQSB=0.960195;RPB=0.998855;SGB=11.0951;VDB=0.719797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.3:36307563 chr03:036307563 0 W/36307563-36307563 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.466433;DP=4639;DP4=2167,2100,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29066e-13;MQSB=0.8291;RPB=0.997864;SGB=19.6499;VDB=0.326775;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.3:36308348 chr03:036308348 0 W/36308348-36308348 FN-52 Single Base Substitution G-T INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN1285-S.SNP.3:36311133 chr03:036311133 0 W/36311133-36311133 FN1285-S Single Base Substitution C-T INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1264-S.SNP.3:36311996 chr03:036311996 0 W/36311996-36311996 FN1264-S Single Base Substitution G-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3546-S.SNP.3:36312502 chr03:036312502 0 W/36312502-36312502 FN3546-S SNP C -> G AC=1;AN=188;BQB=0.999368;DP=3739;DP4=1582,2046,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00160471;MQB=1.31605e-05;MQSB=0.147753;RPB=0.584244;SGB=53.5223;VDB=0.478855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2420.SNP.3:36315353 chr03:036315353 0 W/36315353-36315353 FN2420 SNP C -> T AC=2;AN=200;BQB=0.538211;DP=3493;DP4=1543,1549,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90379e-16;MQSB=0.70163;RPB=0.814344;SGB=48.014;VDB=0.00360879;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.3:36316031 chr03:036316031 0 W/36316031-36316031 FN995-S Single Base Substitution G-A INTERGENIC HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN871-S.SNP.3:36316528 chr03:036316528 0 W/36316528-36316528 FN871-S Single Base Substitution G-T INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4305-S.SNP.3:36325441 chr03:036325441 0 W/36325441-36325441 FN4305-S SNP A -> G AC=1;AN=170;BQB=0.998644;DP=2314;DP4=1210,1042,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.25492e-10;MQSB=0.990416;RPB=0.443063;SGB=65.6427;VDB=0.00226997;EFF=INTRON(MODIFIER||||1471|LOC_Os03g64290|protein_coding|CODING|LOC_Os03g64290.1|21|1) FN3474-S.SNP.3:36335739 chr03:036335739 0 W/36335739-36335739 FN3474-S SNP G -> C AC=1;AN=184;BQB=0.644903;DP=2741;DP4=1418,1070,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42092e-07;MQSB=0.986852;RPB=0.954355;SGB=8.32411;VDB=0.859734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.3:36339415 chr03:036339415 0 W/36339415-36339415 FN1451-S Single Base Substitution C-A INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2657-S.SNP.3:36344507 chr03:036344507 0 W/36344507-36344507 FN2657-S SNP T -> C AC=2;AN=200;BQB=0.79019;DP=4654;DP4=2219,2153,28,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.65813e-33;MQSB=0.80833;RPB=0.177618;SGB=12.9121;VDB=0.012656;EFF=INTRON(MODIFIER||||743|LOC_Os03g64300|protein_coding|CODING|LOC_Os03g64300.1|13|1) FN1541-S.SNP.3:36350638 chr03:036350638 0 W/36350638-36350638 FN1541-S Single Base Substitution A-T INTRON HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2323.SNP.3:36354537 chr03:036354537 0 W/36354537-36354537 FN2323 SNP A -> C AC=2;AN=192;BQB=0.984666;DP=4929;DP4=2231,2382,25,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.37298e-26;MQSB=0.969034;RPB=0.412383;SGB=160.968;VDB=0.2322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D846A|1256|LOC_Os03g64320|protein_coding|CODING|LOC_Os03g64320.1|10|1) FN360-S.SNP.3:36359524 chr03:036359524 0 W/36359524-36359524 FN360-S Single Base Substitution C-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1082-S.SNP.3:36361199 chr03:036361199 0 W/36361199-36361199 FN1082-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os03g64330 aquaporin protein, putative, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN449-S.SNP.3:36363193 chr03:036363193 0 W/36363193-36363193 FN449-S Single Base Substitution C-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1650-S.SNP.3:36371977 chr03:036371977 0 W/36371977-36371977 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2471.SNP.3:36378121 chr03:036378121 0 W/36378121-36378121 FN2471 SNP A -> C AC=1;AN=200;BQB=0.344326;DP=4189;DP4=2174,1662,19,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65288e-14;MQSB=0.997244;RPB=0.705077;SGB=63.3521;VDB=0.661559;EFF=INTRON(MODIFIER||||405|LOC_Os03g64350|protein_coding|CODING|LOC_Os03g64350.1|4|1),INTRON(MODIFIER||||302|LOC_Os03g64350|protein_coding|CODING|LOC_Os03g64350.2|4|1) FN-344.SNP.3:36397051 chr03:036397051 0 W/36397051-36397051 FN-344 Single Base Substitution A-C INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2671-S.SNP.3:36397360 chr03:036397360 0 W/36397360-36397360 FN2671-S SNP C -> T AC=1;AN=200;BQB=0.960294;DP=5443;DP4=2774,2393,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8356e-09;MQSB=0.992205;RPB=0.880003;SGB=40.2696;VDB=0.0376046;EFF=INTRON(MODIFIER||||918|LOC_Os03g64400|protein_coding|CODING|LOC_Os03g64400.1|4|1),INTRON(MODIFIER||||608|LOC_Os03g64400|protein_coding|CODING|LOC_Os03g64400.2|5|1),INTRON(MODIFIER||||444|LOC_Os03g64400|protein_coding|CODING|LOC_Os03g64400.3|5|1),INTRON(MODIFIER||||651|LOC_Os03g64400|protein_coding|CODING|LOC_Os03g64400.4|4|1) FN3375-S.SNP.3:36410328 chr03:036410328 0 W/36410328-36410328 FN3375-S SNP A -> G AC=1;AN=184;BQB=0.835031;DP=3411;DP4=1496,1751,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0105541;MQB=3.71811e-06;MQSB=0.552193;RPB=0.842303;SGB=12.8895;VDB=0.328965 FN2708-S.SNP.4:1944 chr04:000001944 0 W/1944-1944 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.999548;DP=5611;DP4=2487,2732,15,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000356443;MQB=1.01071e-13;MQSB=1.8921e-05;RPB=0.373978;SGB=105.163;VDB=0.92537;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.4:3602 chr04:000003602 0 W/3602-3602 FN4023-S SNP C -> T AC=2;AN=168;BQB=0.946588;DP=2640;DP4=1425,1118,8,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.55524e-12;MQSB=0.691279;RPB=0.976615;SGB=96.481;VDB=0.0199762;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q260*|284|LOC_Os04g01006|protein_coding|CODING|LOC_Os04g01006.1|5|1) FN4136-S.SNP.4:5728 chr04:000005728 0 W/5728-5728 FN4136-S SNP G -> C AC=1;AN=170;BQB=0.945976;DP=2519;DP4=1338,1106,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.39641e-08;MQSB=0.997482;RPB=0.63752;SGB=56.7575;VDB=0.0569165;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Gat|H590D|820|LOC_Os04g01008|protein_coding|CODING|LOC_Os04g01008.1|5|1) FN1045-S.SNP.4:5734 chr04:000005734 0 W/5734-5734 FN1045-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g01008 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN897-S.SNP.4:5912 chr04:000005912 0 W/5912-5912 FN897-S Single Base Substitution G-A INTRON HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN-241.SNP.4:8309 chr04:000008309 0 W/8309-8309 FN-241 Single Base Substitution G-A INTRON HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3293-S.SNP.4:10322 chr04:000010322 0 W/10322-10322 FN3293-S SNP A -> G AC=2;AN=184;BQB=0.640949;DP=3364;DP4=1469,1678,25,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.04967e-28;MQSB=0.98528;RPB=0.662704;SGB=219.588;VDB=0.1557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.4:11967 chr04:000011967 0 W/11967-11967 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.855901;DP=5128;DP4=2315,2561,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8107e-06;MQSB=0.975926;RPB=0.864983;SGB=45.0543;VDB=0.659762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.4:16154 chr04:000016154 0 W/16154-16154 FN1058-S Single Base Substitution T-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN-177.SNP.4:17026 chr04:000017026 0 W/17026-17026 FN-177 Single Base Substitution A-T INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1618-S.SNP.4:17545 chr04:000017545 0 W/17545-17545 FN1618-S Single Base Substitution G-C INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3553-S.SNP.4:18101 chr04:000018101 0 W/18101-18101 FN3553-S SNP G -> A AC=1;AN=188;BQB=0.781219;DP=4008;DP4=1916,1965,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.03823e-08;MQSB=0.984085;RPB=0.967251;SGB=67.1521;VDB=0.308342;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.4:24004 chr04:000024004 0 W/24004-24004 FN-101 Single Base Substitution T-G INTRON HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN4069-S.SNP.4:27278 chr04:000027278 0 W/27278-27278 FN4069-S SNP G -> T AC=1;AN=182;BQB=0.249656;DP=2789;DP4=1347,1350,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.21354e-05;MQSB=0.904969;RPB=0.278707;SGB=39.1386;VDB=0.725469;EFF=INTRON(MODIFIER||||1430|LOC_Os04g01030|protein_coding|CODING|LOC_Os04g01030.1|2|1) FN3970-S.SNP.4:27622 chr04:000027622 0 W/27622-27622 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.365526;DP=1849;DP4=947,768,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19076e-05;MQSB=0.842146;RPB=0.438511;SGB=41.6096;VDB=0.110236;EFF=INTRON(MODIFIER||||1430|LOC_Os04g01030|protein_coding|CODING|LOC_Os04g01030.1|2|1) FN2448.SNP.4:30055 chr04:000030055 0 W/30055-30055 FN2448 SNP G -> A AC=2;AN=200;BQB=0.10451;DP=2843;DP4=1101,1403,6,12;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.010904;MQB=8.87535e-06;MQSB=5.07804e-24;RPB=0.985563;SGB=32.0901;VDB=0.314481;EFF=INTRON(MODIFIER||||1430|LOC_Os04g01030|protein_coding|CODING|LOC_Os04g01030.1|1|1) FN1631-S.SNP.4:30175 chr04:000030175 0 W/30175-30175 FN1631-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g01030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3801-S.SNP.4:30238 chr04:000030238 0 W/30238-30238 FN3801-S SNP C -> G AC=1;AN=190;BQB=0.999175;DP=4362;DP4=2509,1722,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0997249;MQB=0.252005;MQSB=1.52273e-18;RPB=0.761496;SGB=64.5316;VDB=0.411901;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E45D|1430|LOC_Os04g01030|protein_coding|CODING|LOC_Os04g01030.1|1|1) FN545-S.SNP.4:30429 chr04:000030429 0 W/30429-30429 FN545-S Single Base Substitution C-T INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3446-S.SNP.4:30774 chr04:000030774 0 W/30774-30774 FN3446-S SNP T -> A AC=1;AN=184;BQB=0.67568;DP=3963;DP4=1436,2343,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0779712;MQB=0.879563;MQSB=2.145e-14;RPB=0.401138;SGB=39.2697;VDB=0.801406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.4:34878 chr04:000034878 0 W/34878-34878 FN2331 SNP G -> A AC=1;AN=192;BQB=0.92138;DP=5895;DP4=2921,2578,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0327396;MQB=0.799519;MQSB=0.0248221;RPB=0.919177;SGB=72.0322;VDB=0.33201;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A662|1618|LOC_Os04g01040|protein_coding|CODING|LOC_Os04g01040.1|5|1) FN2474.SNP.4:36089 chr04:000036089 0 W/36089-36089 FN2474 SNP C -> T AC=1;AN=200;BQB=0.172268;DP=4444;DP4=2059,2132,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00292529;MQB=4.9996e-15;MQSB=0.984732;RPB=0.868199;SGB=-40.8432;VDB=0.0121009;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H982|1618|LOC_Os04g01040|protein_coding|CODING|LOC_Os04g01040.1|6|1) FN-140.SNP.4:43089 chr04:000043089 0 W/43089-43089 FN-140 Single Base Substitution G-A INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1179-S.SNP.4:43471 chr04:000043471 0 W/43471-43471 FN1179-S Single Base Substitution C-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2550-S.SNP.4:43471 chr04:000043471 0 W/43471-43471 FN2550-S SNP C -> T AC=2;AN=194;BQB=0.314269;DP=3372;DP4=1873,1294,7,8;HOB=0.020406;ICB=0.494899;MQ=49;MQ0F=0.00029656;MQB=5.62417e-07;MQSB=0.870433;RPB=0.064965;SGB=63.3342;VDB=0.283245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3786-S.SNP.4:44598 chr04:000044598 0 W/44598-44598 FN3786-S SNP C -> T AC=1;AN=190;BQB=0.911544;DP=2719;DP4=1080,1522,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.61401e-08;MQSB=0.979232;RPB=0.954912;SGB=71.8647;VDB=0.764012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.4:50727 chr04:000050727 0 W/50727-50727 FN3596-S SNP C -> T AC=1;AN=188;BQB=0.674353;DP=2946;DP4=736,2045,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000339443;MQB=3.44973e-06;MQSB=0.963651;RPB=0.654316;SGB=62.6088;VDB=0.0406173;EFF=INTRON(MODIFIER||||1888|LOC_Os04g01060|protein_coding|CODING|LOC_Os04g01060.1|3|1) FN404-S.SNP.4:52352 chr04:000052352 0 W/52352-52352 FN404-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g01060 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. W246-5-1.SNP.4:61485 chr04:000061485 0 W/61485-61485 W246-5-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3883-S.SNP.4:61598 chr04:000061598 0 W/61598-61598 FN3883-S SNP G -> C AC=2;AN=158;BQB=0.690809;DP=2480;DP4=1263,1090,18,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.94719e-19;MQSB=0.983381;RPB=0.833463;SGB=134.456;VDB=0.76836;EFF=UTR_3_PRIME(MODIFIER||62||906|LOC_Os04g01070|protein_coding|CODING|LOC_Os04g01070.1|4|1) FN3653-S.SNP.4:69715 chr04:000069715 0 W/69715-69715 FN3653-S SNP A -> G AC=1;AN=190;BQB=0.714361;DP=2898;DP4=1385,1429,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51999e-07;MQSB=0.991316;RPB=0.987745;SGB=13.4442;VDB=0.716396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.4:69936 chr04:000069936 0 W/69936-69936 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.671371;DP=4262;DP4=2386,1682,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.67135e-06;MQSB=0.955726;RPB=0.846057;SGB=43.7442;VDB=0.769752;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S176|212|LOC_Os04g01100|protein_coding|CODING|LOC_Os04g01100.1|3|1) FN1264-S.SNP.4:81924 chr04:000081924 0 W/81924-81924 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN_772-3-1.SNP.4:95511 chr04:000095511 0 W/95511-95511 FN_772-3-1 Single Base Substitution G-A HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN3852-S.SNP.4:98878 chr04:000098878 0 W/98878-98878 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.999518;DP=2458;DP4=1290,1032,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.30313e-06;MQSB=0.747811;RPB=0.8808;SGB=38.3284;VDB=0.484466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.4:100615 chr04:000100615 0 W/100615-100615 FN2190-S SNP A -> G AC=2;AN=190;BQB=0.521185;DP=3900;DP4=1426,1954,15,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52507e-16;MQSB=0.308359;RPB=0.395623;SGB=107.178;VDB=0.16612;EFF=INTRON(MODIFIER||||354|LOC_Os04g01140|protein_coding|CODING|LOC_Os04g01140.2|1|1),INTRON(MODIFIER||||516|LOC_Os04g01140|protein_coding|CODING|LOC_Os04g01140.1|1|1) FN1547-S.SNP.4:131807 chr04:000131807 0 W/131807-131807 FN1547-S Single Base Substitution A-G INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2496.SNP.4:134244 chr04:000134244 0 W/134244-134244 FN2496 SNP T -> A AC=1;AN=200;BQB=0.211495;DP=4781;DP4=2407,1888,5,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00418323;MQB=2.00869e-05;MQSB=0.867855;RPB=0.575164;SGB=11.2488;VDB=0.945331;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.4:135640 chr04:000135640 0 W/135640-135640 FN-190 Single Base Substitution C-G INTERGENIC HOMO SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN319-S.SNP.4:149304 chr04:000149304 0 W/149304-149304 FN319-S Single Base Substitution G-A INTRON HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2795-S.SNP.4:149339 chr04:000149339 0 W/149339-149339 FN2795-S SNP G -> C AC=1;AN=198;BQB=0.90228;DP=3882;DP4=1830,1817,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.78675e-09;MQSB=0.748362;RPB=0.976536;SGB=65.3149;VDB=0.960529;EFF=INTRON(MODIFIER||||411|LOC_Os04g01210|protein_coding|CODING|LOC_Os04g01210.1|1|1) FN934-S.SNP.4:149923 chr04:000149923 0 W/149923-149923 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3398-S.SNP.4:153264 chr04:000153264 0 W/153264-153264 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.767272;DP=2561;DP4=1313,1185,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03282e-05;MQSB=0.983315;RPB=0.929312;SGB=48.7425;VDB=0.965905;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.4:156554 chr04:000156554 0 W/156554-156554 FN_772-3-1 Single Base Substitution C-T HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN-334.SNP.4:157969 chr04:000157969 0 W/157969-157969 FN-334 Single Base Substitution T-C INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2560-S.SNP.4:159875 chr04:000159875 0 W/159875-159875 FN2560-S SNP T -> A AC=1;AN=198;BQB=0.0752409;DP=4128;DP4=1973,1983,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.83612e-05;MQSB=0.937393;RPB=0.980025;SGB=40.149;VDB=0.932229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.4:188492 chr04:000188492 0 W/188492-188492 FN1008-S Single Base Substitution A-T INTRON HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN4044-S.SNP.4:189169 chr04:000189169 0 W/189169-189169 FN4044-S SNP T -> C AC=2;AN=168;BQB=0.873483;DP=2573;DP4=1329,1143,14,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.91367e-11;MQSB=0.977116;RPB=0.378865;SGB=92.0501;VDB=0.312946;EFF=INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.1|16|1),INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.2|16|1),INTRON(MODIFIER||||483|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.3|16|1) FN4253-S.SNP.4:191909 chr04:000191909 0 W/191909-191909 FN4253-S SNP A -> T AC=1;AN=170;BQB=0.616378;DP=2432;DP4=1176,1209,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000913054;MQSB=0.926495;RPB=0.680321;SGB=25.6601;VDB=0.355905;EFF=INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.1|10|1),INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.2|10|1),INTRON(MODIFIER||||483|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.3|10|1) FN483-S.SNP.4:193677 chr04:000193677 0 W/193677-193677 FN483-S Single Base Substitution A-T INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN4078-S.SNP.4:195731 chr04:000195731 0 W/195731-195731 FN4078-S SNP A -> T AC=1;AN=182;BQB=0.951378;DP=3103;DP4=1571,1468,7,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.629e-12;MQSB=0.873358;RPB=0.979616;SGB=84.7091;VDB=0.147204;EFF=INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.1|2|1),INTRON(MODIFIER||||608|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.2|2|1),INTRON(MODIFIER||||483|LOC_Os04g01250|protein_coding|CODING|LOC_Os04g01250.3|2|1) FN4272-S.SNP.4:197170 chr04:000197170 0 W/197170-197170 FN4272-S SNP A -> T AC=1;AN=170;BQB=0.997675;DP=2093;DP4=865,1122,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.1868e-08;MQSB=0.941653;RPB=0.576652;SGB=38.3207;VDB=0.162373;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.4:197173 chr04:000197173 0 W/197173-197173 FN4272-S SNP A -> G AC=1;AN=170;BQB=0.597542;DP=2085;DP4=884,1065,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.7664e-10;MQSB=0.955034;RPB=0.277701;SGB=5.77511;VDB=0.144039;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.4:200583 chr04:000200583 0 W/200583-200583 FN-269 Single Base Substitution G-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2467.SNP.4:203647 chr04:000203647 0 W/203647-203647 FN2467 SNP T -> C AC=2;AN=200;BQB=0.920897;DP=5325;DP4=2464,2431,23,27;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0174648;MQB=0.0227408;MQSB=0.023248;RPB=0.339362;SGB=60.8554;VDB=0.00680961;EFF=INTRON(MODIFIER||||159|LOC_Os04g01260|protein_coding|CODING|LOC_Os04g01260.1|1|1) FN-213.SNP.4:207348 chr04:000207348 0 W/207348-207348 FN-213 Single Base Substitution C-T INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3817-S.SNP.4:210668 chr04:000210668 0 W/210668-210668 FN3817-S SNP T -> A AC=1;AN=190;BQB=0.369233;DP=3154;DP4=1456,1561,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.41266e-09;MQSB=0.999847;RPB=0.95333;SGB=71.6393;VDB=0.116647;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.4:211572 chr04:000211572 0 W/211572-211572 FN_N1-151-7 Single Base Substitution T-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2779-S.SNP.4:212914 chr04:000212914 0 W/212914-212914 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.944825;DP=4360;DP4=2007,2094,10,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.84775e-14;MQSB=0.999831;RPB=0.756268;SGB=57.8907;VDB=0.519129;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.4:214370 chr04:000214370 0 W/214370-214370 FN-93 Single Base Substitution C-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN-93.SNP.4:214371 chr04:000214371 0 W/214371-214371 FN-93 Single Base Substitution C-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3039-S.SNP.4:214886 chr04:000214886 0 W/214886-214886 FN3039-S SNP A -> G AC=2;AN=184;BQB=0.965321;DP=3155;DP4=1294,1732,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.99486e-18;MQSB=0.794068;RPB=0.966551;SGB=116.749;VDB=0.922753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:214969 chr04:000214969 0 W/214969-214969 FN1557-S Single Base Substitution T-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3841-S.SNP.4:215196 chr04:000215196 0 W/215196-215196 FN3841-S SNP C -> T AC=1;AN=190;BQB=0.938679;DP=2455;DP4=1302,1077,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16427e-05;MQSB=0.993508;RPB=0.468759;SGB=35.4339;VDB=0.864215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.4:232757 chr04:000232757 0 W/232757-232757 FN1232-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3715-S.SNP.4:236537 chr04:000236537 0 W/236537-236537 FN3715-S SNP A -> G AC=2;AN=190;BQB=0.989505;DP=2623;DP4=1153,1269,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.12267e-15;MQSB=0.938053;RPB=0.998482;SGB=-3.80607;VDB=0.0618056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.4:241023 chr04:000241023 0 W/241023-241023 FN2379 SNP C -> G AC=1;AN=192;BQB=0.900402;DP=4491;DP4=2163,2130,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.77685e-09;MQSB=0.966968;RPB=0.998861;SGB=28.9139;VDB=0.645865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V718L|828|LOC_Os04g01310|protein_coding|CODING|LOC_Os04g01310.1|1|1) FN-174.SNP.4:247733 chr04:000247733 0 W/247733-247733 FN-174 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g01320 serine/threonine-protein kinase receptor precursor, putative, expressed SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3555-S.SNP.4:258681 chr04:000258681 0 W/258681-258681 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.898643;DP=2197;DP4=1078,1047,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0;MQB=0.0057086;MQSB=0.0201139;RPB=0.970317;SGB=80.782;VDB=0.0935062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.4:268987 chr04:000268987 0 W/268987-268987 FN1540-S Single Base Substitution T-G INTERGENIC Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN267-S.SNP.4:269625 chr04:000269625 0 W/269625-269625 FN267-S Single Base Substitution A-T INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN738-S.SNP.4:271330 chr04:000271330 0 W/271330-271330 FN738-S Single Base Substitution T-G INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2387.SNP.4:276502 chr04:000276502 0 W/276502-276502 FN2387 SNP G -> A AC=1;AN=192;BQB=0.844313;DP=4715;DP4=2402,2031,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000212089;MQB=6.02115e-07;MQSB=0.00182664;RPB=0.729834;SGB=34.0426;VDB=0.31467;EFF=INTRON(MODIFIER||||698|LOC_Os04g01370|protein_coding|CODING|LOC_Os04g01370.1|4|1) FN1516-S.SNP.4:277372 chr04:000277372 0 W/277372-277372 FN1516-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g01370 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN871-S.SNP.4:279175 chr04:000279175 0 W/279175-279175 FN871-S Single Base Substitution G-A INTRON HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1656-S.SNP.4:283620 chr04:000283620 0 W/283620-283620 FN1656-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g01400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1182-S.SNP.4:293100 chr04:000293100 0 W/293100-293100 FN1182-S Single Base Substitution C-T INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2354.SNP.4:295607 chr04:000295607 0 W/295607-295607 FN2354 SNP T -> C AC=2;AN=192;BQB=0.808729;DP=4848;DP4=2262,2327,20,16;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0;MQB=5.04694e-10;MQSB=0.898902;RPB=0.148842;SGB=77.6365;VDB=0.411525;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.4:295662 chr04:000295662 0 W/295662-295662 FN404-S Single Base Substitution G-C INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN2153-S.SNP.4:296765 chr04:000296765 0 W/296765-296765 FN2153-S SNP T -> A AC=1;AN=168;BQB=0.144453;DP=2671;DP4=1117,1500,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.86026;MQSB=0.0205356;RPB=0.960189;SGB=-17.5266;VDB=0.0830519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.4:300000 chr04:000300000 0 W/300000-300000 FN2327 SNP T -> A AC=2;AN=192;BQB=0.835021;DP=3701;DP4=1546,1642,13,16;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.00459335;MQB=1.50062e-06;MQSB=0.0228931;RPB=0.667795;SGB=26.127;VDB=0.268819;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.4:304714 chr04:000304714 0 W/304714-304714 FN244-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g01439 retrotransposon protein, putative, unclassified, expressed SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN534-S.SNP.4:320713 chr04:000320713 0 W/320713-320713 FN534-S Single Base Substitution A-G INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN2386.SNP.4:320983 chr04:000320983 0 W/320983-320983 FN2386 SNP A -> T AC=2;AN=192;BQB=0.997882;DP=5020;DP4=2247,2372,29,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.75599e-39;MQSB=0.920286;RPB=0.598963;SGB=85.5722;VDB=0.432222;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.4:327135 chr04:000327135 0 W/327135-327135 W502-3-4 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g01480 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN3857-S.SNP.4:328713 chr04:000328713 0 W/328713-328713 FN3857-S SNP G -> A AC=1;AN=158;BQB=0.951344;DP=2494;DP4=1095,1333,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.94178e-06;MQSB=0.972833;RPB=0.938931;SGB=20.5959;VDB=0.635556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E849K|850|LOC_Os04g01480|protein_coding|CODING|LOC_Os04g01480.1|14|1) FN1150-S.SNP.4:330625 chr04:000330625 0 W/330625-330625 FN1150-S Single Base Substitution C-A INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN3432-S.SNP.4:333365 chr04:000333365 0 W/333365-333365 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.994861;DP=2605;DP4=1184,1320,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27676e-08;MQSB=0.765825;RPB=0.933116;SGB=66.8296;VDB=0.999543;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.4:347994 chr04:000347994 0 W/347994-347994 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.881345;DP=4092;DP4=1958,1861,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.91077e-08;MQSB=0.346513;RPB=0.926411;SGB=65.3149;VDB=0.768293;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.4:357587 chr04:000357587 0 W/357587-357587 FN-353 Single Base Substitution A-G INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN831-S.SNP.4:365812 chr04:000365812 0 W/365812-365812 FN831-S Single Base Substitution A-G INTRON HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN3653-S.SNP.4:377549 chr04:000377549 0 W/377549-377549 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.911;DP=2871;DP4=1461,1303,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52108e-05;MQSB=0.990803;RPB=0.925901;SGB=30.8803;VDB=0.716595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:380489 chr04:000380489 0 W/380489-380489 FN1557-S Single Base Substitution C-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1557-S.SNP.4:382493 chr04:000382493 0 W/382493-382493 FN1557-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g01560 expressed protein SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3934-S.SNP.4:385518 chr04:000385518 0 W/385518-385518 FN3934-S SNP C -> A AC=2;AN=158;BQB=0.857483;DP=2351;DP4=1177,1065,14,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.05864e-17;MQSB=0.997672;RPB=0.725852;SGB=143.195;VDB=0.385882;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.4:406672 chr04:000406672 0 W/406672-406672 FN4031-S SNP G -> T AC=1;AN=168;BQB=0.497889;DP=3069;DP4=1267,1633,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.54923e-06;MQSB=0.0398933;RPB=0.740128;SGB=58.7637;VDB=0.978429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.4:407861 chr04:000407861 0 W/407861-407861 FN2663-S SNP T -> C AC=2;AN=200;BQB=0.805648;DP=4849;DP4=2467,2162,37,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.40759e-30;MQSB=0.538727;RPB=0.209737;SGB=247.682;VDB=0.202063;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.4:410205 chr04:000410205 0 W/410205-410205 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.860392;DP=2915;DP4=1322,1447,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84192e-05;MQSB=0.998535;RPB=0.88157;SGB=44.5415;VDB=0.66123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.4:416537 chr04:000416537 0 W/416537-416537 FN1529-S Single Base Substitution G-A INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2680-S.SNP.4:425406 chr04:000425406 0 W/425406-425406 FN2680-S SNP T -> A AC=2;AN=200;BQB=0.992663;DP=5095;DP4=2361,2431,29,41;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00196271;MQB=1.0035e-05;MQSB=1.94901e-06;RPB=0.793824;SGB=92.9588;VDB=0.0108966;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.4:427891 chr04:000427891 0 W/427891-427891 FN4164-S SNP C -> T AC=1;AN=170;BQB=0.826393;DP=2218;DP4=1135,1026,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0811542;MQB=0.140766;MQSB=0.840487;RPB=0.999197;SGB=32.0972;VDB=0.168606;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S305|1096|LOC_Os04g01630|protein_coding|CODING|LOC_Os04g01630.1|1|1) FN-188.SNP.4:443342 chr04:000443342 0 W/443342-443342 FN-188 Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN_807-3-1.SNP.4:443595 chr04:000443595 0 W/443595-443595 FN_807-3-1 Single Base Substitution A-G HET LOC_Os04g01650 erythronate-4-phosphate dehydrogenase domain containing protein, expressed SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1716-S.SNP.4:448327 chr04:000448327 0 W/448327-448327 FN1716-S SNP T -> C AC=2;AN=188;BQB=0.150974;DP=2516;DP4=1088,1376,11,25;HOB=0.0210502;ICB=0.494738;MQ=23;MQ0F=0.0631955;MQB=0.749396;MQSB=3.39866e-21;RPB=0.571753;SGB=-125.748;VDB=0.693425;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.4:452834 chr04:000452834 0 W/452834-452834 FN-93 Single Base Substitution A-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3536-S.SNP.4:455266 chr04:000455266 0 W/455266-455266 FN3536-S SNP C -> T AC=1;AN=188;BQB=0.6676;DP=2764;DP4=1210,1385,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00103e-07;MQSB=0.46896;RPB=0.995718;SGB=67.1521;VDB=0.218615;EFF=INTRON(MODIFIER||||316|LOC_Os04g01674|protein_coding|CODING|LOC_Os04g01674.1|1|1) FN1442-S.SNP.4:455276 chr04:000455276 0 W/455276-455276 FN1442-S Single Base Substitution A-T INTRON HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1644-S.SNP.4:458635 chr04:000458635 0 W/458635-458635 FN1644-S Single Base Substitution C-T INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2704-S.SNP.4:463253 chr04:000463253 0 W/463253-463253 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.634945;DP=4534;DP4=2027,2241,8,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.21135e-17;MQSB=0.748884;RPB=0.869197;SGB=60.747;VDB=0.593274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.4:463394 chr04:000463394 0 W/463394-463394 FN1094-S Single Base Substitution A-G INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-221.SNP.4:467108 chr04:000467108 0 W/467108-467108 FN-221 Single Base Substitution G-C UTR_3_PRIME HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN-102.SNP.4:471069 chr04:000471069 0 W/471069-471069 FN-102 Single Base Substitution A-G INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN4145-S.SNP.4:474345 chr04:000474345 0 W/474345-474345 FN4145-S SNP G -> C AC=2;AN=170;BQB=0.800308;DP=2593;DP4=1249,1259,9,13;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.12019e-10;MQSB=0.65203;RPB=0.336485;SGB=92.2986;VDB=0.554329;EFF=INTRON(MODIFIER||||566|LOC_Os04g01720|protein_coding|CODING|LOC_Os04g01720.1|1|1) FN902-S.SNP.4:478002 chr04:000478002 0 W/478002-478002 FN902-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1163-S.SNP.4:484907 chr04:000484907 0 W/484907-484907 FN1163-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g01740 heat shock protein, putative, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN818-S.SNP.4:486057 chr04:000486057 0 W/486057-486057 FN818-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN2407.SNP.4:486488 chr04:000486488 0 W/486488-486488 FN2407 SNP T -> C AC=1;AN=200;BQB=0.940854;DP=4790;DP4=2540,2020,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79092e-08;MQSB=0.820003;RPB=0.946223;SGB=34.6953;VDB=0.237631;EFF=INTERGENIC(MODIFIER||||||||||1) W427-1-1.SNP.4:493040 chr04:000493040 0 W/493040-493040 W427-1-1 Single Base Substitution T-C INTRON HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN4122-S.SNP.4:495505 chr04:000495505 0 W/495505-495505 FN4122-S SNP G -> C AC=1;AN=182;BQB=0.516751;DP=3310;DP4=1876,1367,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.49611e-06;MQSB=0.991414;RPB=1;SGB=35.6277;VDB=0.852285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.4:508412 chr04:000508412 0 W/508412-508412 FN1615-S Single Base Substitution G-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2438.SNP.4:516781 chr04:000516781 0 W/516781-516781 FN2438 SNP G -> C AC=1;AN=200;BQB=0.692305;DP=4499;DP4=2017,2145,16,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88392e-20;MQSB=0.998678;RPB=0.671908;SGB=81.5883;VDB=0.787886;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.4:523484 chr04:000523484 0 W/523484-523484 FN1485-S Single Base Substitution G-C INTRON Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2731-S.SNP.4:525423 chr04:000525423 0 W/525423-525423 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.470528;DP=3109;DP4=966,1770,8,20;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0704407;MQB=0.689557;MQSB=0;RPB=0.982936;SGB=-39.6587;VDB=0.761253;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.4:541211 chr04:000541211 0 W/541211-541211 FN851-S Single Base Substitution A-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN-142.SNP.4:545004 chr04:000545004 0 W/545004-545004 FN-142 Single Base Substitution A-T INTERGENIC HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN4010-S.SNP.4:546550 chr04:000546550 0 W/546550-546550 FN4010-S SNP C -> T AC=2;AN=168;BQB=0.997436;DP=3023;DP4=1193,1705,10,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.47571e-15;MQSB=0.884096;RPB=0.231283;SGB=22.7913;VDB=0.151586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A499T|731|LOC_Os04g01874|protein_coding|CODING|LOC_Os04g01874.1|2|1) FN1035-S.SNP.4:547656 chr04:000547656 0 W/547656-547656 FN1035-S Single Base Substitution G-T INTRON HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1313-S.SNP.4:549292 chr04:000549292 0 W/549292-549292 FN1313-S Single Base Substitution T-A INTRON HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3971-S.SNP.4:554547 chr04:000554547 0 W/554547-554547 FN3971-S SNP T -> C AC=1;AN=168;BQB=0.784859;DP=2411;DP4=1268,979,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76062e-06;MQSB=0.66829;RPB=0.311543;SGB=38.1788;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.4:557185 chr04:000557185 0 W/557185-557185 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.813284;DP=4736;DP4=2301,2203,14,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.16672e-09;MQSB=0.966994;RPB=0.667497;SGB=47.4799;VDB=0.480129;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.4:559327 chr04:000559327 0 W/559327-559327 FN-292 Single Base Substitution C-T INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1200-S.SNP.4:561836 chr04:000561836 0 W/561836-561836 FN1200-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g01890 protein kinase, putative, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2098-S.SNP.4:562663 chr04:000562663 0 W/562663-562663 FN2098-S SNP T -> A AC=1;AN=168;BQB=0.668783;DP=2914;DP4=1760,1105,15,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.93521e-15;MQSB=0.969154;RPB=0.987684;SGB=96.5026;VDB=0.952458;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.4:562749 chr04:000562749 0 W/562749-562749 FN-199 Single Base Substitution T-C INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-407.SNP.4:565143 chr04:000565143 0 W/565143-565143 FN-407 Single Base Substitution C-G INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN2124-S.SNP.4:566632 chr04:000566632 0 W/566632-566632 FN2124-S SNP G -> C AC=2;AN=168;BQB=0.839733;DP=1319;DP4=401,865,3,11;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.0181956;MQB=0.000143809;MQSB=0.0703676;RPB=0.847069;SGB=19.7539;VDB=0.954067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R37T|276|LOC_Os04g01900|protein_coding|CODING|LOC_Os04g01900.1|1|1) FN-21.SNP.4:569718 chr04:000569718 0 W/569718-569718 FN-21 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g01910 legume lectins beta domain containing protein, putative, expressed SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN2232-S.SNP.4:569718 chr04:000569718 0 W/569718-569718 FN2232-S SNP C -> T AC=1;AN=190;BQB=0.810873;DP=3883;DP4=1642,1766,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.15132e-07;MQSB=0.982414;RPB=0.556906;SGB=26.2136;VDB=0.556733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M131I|326|LOC_Os04g01910|protein_coding|CODING|LOC_Os04g01910.1|1|1) FN3852-S.SNP.4:579328 chr04:000579328 0 W/579328-579328 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.973624;DP=3510;DP4=1707,1683,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0133903;MQB=0.0030412;MQSB=0.100242;RPB=0.715851;SGB=51.4366;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.4:581779 chr04:000581779 0 W/581779-581779 FN2486 SNP G -> A AC=1;AN=200;BQB=0.980256;DP=3701;DP4=1928,1503,3,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00351256;MQB=0.0764109;MQSB=0.254692;RPB=0.999322;SGB=40.4492;VDB=0.698224;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.4:587934 chr04:000587934 0 W/587934-587934 FN-147 Single Base Substitution C-T INTERGENIC HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN-99.SNP.4:599871 chr04:000599871 0 W/599871-599871 FN-99 Single Base Substitution C-T INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-99.SNP.4:599874 chr04:000599874 0 W/599874-599874 FN-99 Single Base Substitution T-A INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1554-S.SNP.4:600031 chr04:000600031 0 W/600031-600031 FN1554-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN404-S.SNP.4:602723 chr04:000602723 0 W/602723-602723 FN404-S Single Base Substitution A-C INTRON HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN320-S.SNP.4:604210 chr04:000604210 0 W/604210-604210 FN320-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g01970 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN-155.SNP.4:607417 chr04:000607417 0 W/607417-607417 FN-155 Single Base Substitution A-T INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2165-S.SNP.4:625665 chr04:000625665 0 W/625665-625665 FN2165-S SNP C -> T AC=1;AN=168;BQB=0.00647916;DP=3751;DP4=1930,1775,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.01413e-06;MQSB=0.840276;RPB=0.983664;SGB=-130.056;VDB=0.279043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.4:627489 chr04:000627489 0 W/627489-627489 FN1665-S Single Base Substitution G-A INTRON Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN4204-S.SNP.4:633733 chr04:000633733 0 W/633733-633733 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.95049;DP=2339;DP4=1040,1237,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=8.30765e-06;MQSB=0.00175113;RPB=0.972946;SGB=38.987;VDB=0.713138;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.4:634463 chr04:000634463 0 W/634463-634463 FN-127 Single Base Substitution A-G INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN565-S.SNP.4:639704 chr04:000639704 0 W/639704-639704 FN565-S Single Base Substitution A-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN426-S.SNP.4:642474 chr04:000642474 0 W/642474-642474 FN426-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN4111-S.SNP.4:643790 chr04:000643790 0 W/643790-643790 FN4111-S SNP A -> T AC=1;AN=182;BQB=0.853399;DP=2954;DP4=1500,1335,21,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.28271e-18;MQSB=0.992092;RPB=0.987397;SGB=152.372;VDB=0.158163;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.4:644302 chr04:000644302 0 W/644302-644302 FN807-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2600-S.SNP.4:658333 chr04:000658333 0 W/658333-658333 FN2600-S SNP G -> T AC=2;AN=198;BQB=0.306861;DP=3768;DP4=1750,1783,19,13;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.48934e-15;MQSB=0.984271;RPB=0.684741;SGB=68.2711;VDB=0.851611;EFF=INTRON(MODIFIER||||188|LOC_Os04g02060|protein_coding|CODING|LOC_Os04g02060.1|2|1) FN2379.SNP.4:661564 chr04:000661564 0 W/661564-661564 FN2379 SNP C -> T AC=1;AN=192;BQB=0.614361;DP=4732;DP4=2480,1981,21,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.86553e-17;MQSB=0.96026;RPB=0.938985;SGB=107.503;VDB=0.400601;EFF=UTR_3_PRIME(MODIFIER||345||522|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.1|2|1),UTR_3_PRIME(MODIFIER||345||398|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.2|3|1),UTR_3_PRIME(MODIFIER||345||362|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.3|2|1),UTR_3_PRIME(MODIFIER||345||516|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.4|4|1) FN2266-S.SNP.4:662045 chr04:000662045 0 W/662045-662045 FN2266-S SNP T -> C AC=2;AN=190;BQB=0.725517;DP=4894;DP4=2323,2305,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.09728e-12;MQSB=0.990503;RPB=0.4863;SGB=71.6393;VDB=0.97587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y478C|522|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y318C|362|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y472C|516|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y354C|398|LOC_Os04g02070|protein_coding|CODING|LOC_Os04g02070.2|3|1) FN1079-S.SNP.4:662509 chr04:000662509 0 W/662509-662509 FN1079-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3698-S.SNP.4:669031 chr04:000669031 0 W/669031-669031 FN3698-S SNP A -> G AC=2;AN=190;BQB=0.219366;DP=2851;DP4=1382,1390,10,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.76192e-07;MQSB=0.951284;RPB=0.92377;SGB=85.5263;VDB=0.736172;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.4:678007 chr04:000678007 0 W/678007-678007 FN4141-S SNP G -> A AC=1;AN=170;BQB=0.719369;DP=2423;DP4=1214,1135,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00412712;MQB=0.000118842;MQSB=0.549762;RPB=0.912099;SGB=24.5502;VDB=0.102407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.4:679086 chr04:000679086 0 W/679086-679086 FN3554-S SNP A -> C AC=1;AN=188;BQB=0.941791;DP=2695;DP4=1295,1237,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.26196e-08;MQSB=0.752762;RPB=0.997823;SGB=23.5329;VDB=0.405613;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.4:683459 chr04:000683459 0 W/683459-683459 FN880-S Single Base Substitution A-G INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3286-S.SNP.4:686291 chr04:000686291 0 W/686291-686291 FN3286-S SNP A -> G AC=1;AN=184;BQB=0.850985;DP=3162;DP4=1383,1677,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.73975e-12;MQSB=0.91132;RPB=0.927848;SGB=80.3949;VDB=0.750287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y276H|941|LOC_Os04g02110|protein_coding|CODING|LOC_Os04g02110.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y434H|1099|LOC_Os04g02110|protein_coding|CODING|LOC_Os04g02110.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y434H|1099|LOC_Os04g02110|protein_coding|CODING|LOC_Os04g02110.2|1|1) FN2164-S.SNP.4:691240 chr04:000691240 0 W/691240-691240 FN2164-S SNP G -> T AC=2;AN=168;BQB=0.207193;DP=4169;DP4=2125,1970,23,35;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.000479731;MQB=1.27792e-08;MQSB=2.51048e-06;RPB=0.935317;SGB=-310.264;VDB=0.357703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.4:692542 chr04:000692542 0 W/692542-692542 FN1467-S Single Base Substitution T-C INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN439-S.SNP.4:697838 chr04:000697838 0 W/697838-697838 FN439-S Single Base Substitution G-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-363.SNP.4:706300 chr04:000706300 0 W/706300-706300 FN-363 Single Base Substitution G-A INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN3829-S.SNP.4:710081 chr04:000710081 0 W/710081-710081 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.649995;DP=2429;DP4=1275,1080,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46543e-09;MQSB=0.960847;RPB=0.901399;SGB=8.77275;VDB=0.92023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A164V|494|LOC_Os04g02140|protein_coding|CODING|LOC_Os04g02140.1|2|1) FN3707-S.SNP.4:713541 chr04:000713541 0 W/713541-713541 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.767618;DP=1429;DP4=678,465,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0;MQB=0.00104733;MQSB=0.00903189;RPB=0.617139;SGB=53.6492;VDB=0.385426;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.4:714545 chr04:000714545 0 W/714545-714545 FN1684-S SNP C -> T AC=1;AN=188;BQB=0.570971;DP=2509;DP4=1294,1136,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0;MQB=0.0748352;MQSB=1.65309e-08;RPB=0.969938;SGB=15.903;VDB=0.845817;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.4:716267 chr04:000716267 0 W/716267-716267 FN929-S Single Base Substitution A-T INTRON HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN851-S.SNP.4:719119 chr04:000719119 0 W/719119-719119 FN851-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g02150 tRNA methyltransferase, putative, expressed SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN-101.SNP.4:731213 chr04:000731213 0 W/731213-731213 FN-101 Single Base Substitution A-C INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2481.SNP.4:731292 chr04:000731292 0 W/731292-731292 FN2481 SNP G -> A AC=2;AN=200;BQB=0.959139;DP=4784;DP4=2536,1947,24,21;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=2.0844e-16;MQSB=0.961157;RPB=0.997418;SGB=102.43;VDB=0.704808;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.4:737294 chr04:000737294 0 W/737294-737294 FN1030-S Single Base Substitution T-C INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN_N1-150-1.SNP.4:737464 chr04:000737464 0 W/737464-737464 FN_N1-150-1 Single Base Substitution G-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN781-S.SNP.4:740314 chr04:000740314 0 W/740314-740314 FN781-S Single Base Substitution T-G INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN3663-S.SNP.4:748103 chr04:000748103 0 W/748103-748103 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.966891;DP=2640;DP4=1391,1172,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.59638e-05;MQSB=1.86419e-05;RPB=0.999058;SGB=30.8803;VDB=0.995963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.4:755736 chr04:000755736 0 W/755736-755736 FN1748-S SNP C -> G AC=1;AN=188;BQB=0.720078;DP=1967;DP4=997,941,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0;MQB=0.045026;MQSB=0.0821634;RPB=0.621064;SGB=31.1628;VDB=0.385941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N21K|661|LOC_Os04g02200|protein_coding|CODING|LOC_Os04g02200.1|1|1) FN2538-S.SNP.4:759914 chr04:000759914 0 W/759914-759914 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.613978;DP=4659;DP4=2251,2125,12,22;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.000429277;MQB=0.0103529;MQSB=0;RPB=0.963649;SGB=112.051;VDB=0.88525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.4:792950 chr04:000792950 0 W/792950-792950 FN1531-S Single Base Substitution T-A INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN3991-S.SNP.4:793717 chr04:000793717 0 W/793717-793717 FN3991-S SNP A -> G AC=1;AN=168;BQB=0.830856;DP=2789;DP4=1463,1164,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.0304654;MQSB=0.970596;RPB=0.869666;SGB=30.0193;VDB=0.318702;EFF=UTR_3_PRIME(MODIFIER||663||471|LOC_Os04g02280|protein_coding|CODING|LOC_Os04g02280.1|4|1) FN3552-S.SNP.4:804283 chr04:000804283 0 W/804283-804283 FN3552-S SNP C -> A AC=1;AN=188;BQB=0.993335;DP=3198;DP4=1720,1394,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.25671e-13;MQSB=0.00632764;RPB=0.652631;SGB=60.7873;VDB=0.497518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.4:804284 chr04:000804284 0 W/804284-804284 FN3552-S SNP G -> A AC=1;AN=188;BQB=0.999221;DP=3207;DP4=1721,1400,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.50619e-12;MQSB=0.00261073;RPB=0.831995;SGB=80.782;VDB=0.586144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.4:812731 chr04:000812731 0 W/812731-812731 FN1619-S Single Base Substitution G-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1754-S.SNP.4:814055 chr04:000814055 0 W/814055-814055 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.226825;DP=4642;DP4=2246,2332,15,26;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0637656;MQB=0.247475;MQSB=0.264756;RPB=0.636602;SGB=-274.645;VDB=0.324025;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R40*|380|LOC_Os04g02320|protein_coding|CODING|LOC_Os04g02320.1|1|1);LOF=(LOC_Os04g02320|LOC_Os04g02320|1|1.00);NMD=(LOC_Os04g02320|LOC_Os04g02320|1|1.00) FN2422.SNP.4:815838 chr04:000815838 0 W/815838-815838 FN2422 SNP T -> C AC=1;AN=200;BQB=0.995636;DP=6418;DP4=3796,2210,10,9;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.00545341;MQB=0.125714;MQSB=1.13968e-11;RPB=0.578584;SGB=58.2954;VDB=0.71053;EFF=INTRON(MODIFIER||||237|LOC_Os04g02330|protein_coding|CODING|LOC_Os04g02330.1|1|1) FN4037-S.SNP.4:835227 chr04:000835227 0 W/835227-835227 FN4037-S SNP G -> A AC=2;AN=168;BQB=0.905188;DP=1587;DP4=713,757,9,7;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.00252048;MQB=0.0064339;MQSB=1.76041e-20;RPB=0.691112;SGB=24.6155;VDB=0.649897;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.4:841222 chr04:000841222 0 W/841222-841222 FN1203-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g02360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN3835-S.SNP.4:843279 chr04:000843279 0 W/843279-843279 FN3835-S SNP G -> A AC=2;AN=190;BQB=0.971169;DP=2861;DP4=1326,1417,16,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.53572e-07;MQSB=0.163349;RPB=0.776594;SGB=96.5165;VDB=0.709089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.4:864734 chr04:000864734 0 W/864734-864734 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.576372;DP=2956;DP4=1061,1686,8,18;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0;MQB=0.00826853;MQSB=7.81227e-29;RPB=0.882893;SGB=83.2905;VDB=0.44394;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.4:870320 chr04:000870320 0 W/870320-870320 FN4122-S SNP A -> T AC=1;AN=182;BQB=0.939292;DP=3033;DP4=1466,1492,13,9;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0;MQB=1.54493e-12;MQSB=1.07658e-05;RPB=0.94707;SGB=93.7308;VDB=0.455554;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.4:871385 chr04:000871385 0 W/871385-871385 FN892-S Single Base Substitution C-G INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1158-S.SNP.4:902975 chr04:000902975 0 W/902975-902975 FN1158-S Single Base Substitution A-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN4163-S.SNP.4:904112 chr04:000904112 0 W/904112-904112 FN4163-S SNP A -> T AC=1;AN=170;BQB=0.00704318;DP=2026;DP4=922,1051,11,2;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0;MQB=2.12589e-06;MQSB=0.00327287;RPB=0.250408;SGB=52.3148;VDB=0.541747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.4:905883 chr04:000905883 0 W/905883-905883 FN1330-S Single Base Substitution C-T INTRON HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN4202-S.SNP.4:945077 chr04:000945077 0 W/945077-945077 FN4202-S SNP C -> G AC=2;AN=170;BQB=0.871164;DP=1142;DP4=1063,34,13,0;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0;MQB=0.00970598;MQSB=1.04425e-14;RPB=0.838068;SGB=52.3148;VDB=0.375586;EFF=UTR_3_PRIME(MODIFIER||1008||147|LOC_Os04g02550|protein_coding|CODING|LOC_Os04g02550.1|2|1) FN1514-S.SNP.4:970506 chr04:000970506 0 W/970506-970506 FN1514-S Single Base Substitution A-G INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN846-S.SNP.4:971100 chr04:000971100 0 W/971100-971100 FN846-S Single Base Substitution T-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2489.SNP.4:971878 chr04:000971878 0 W/971878-971878 FN2489 SNP G -> A AC=1;AN=200;BQB=0.00543625;DP=4048;DP4=1831,1910,7,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.216542;MQSB=0.970664;RPB=0.727736;SGB=40.2696;VDB=0.278007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T11M|127|LOC_Os04g02590|protein_coding|CODING|LOC_Os04g02590.1|1|1) FN3326-S.SNP.4:977118 chr04:000977118 0 W/977118-977118 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.972171;DP=3502;DP4=1501,1882,7,21;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0108509;MQB=1.59767e-05;MQSB=0.299184;RPB=0.264326;SGB=121.091;VDB=0.0884486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A610T|1199|LOC_Os04g02600|protein_coding|CODING|LOC_Os04g02600.1|2|1) FN-174.SNP.4:979258 chr04:000979258 0 W/979258-979258 FN-174 Single Base Substitution A-G INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN318-S.SNP.4:979266 chr04:000979266 0 W/979266-979266 FN318-S Single Base Substitution A-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1193-S.SNP.4:986969 chr04:000986969 0 W/986969-986969 FN1193-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3807-S.SNP.4:989152 chr04:000989152 0 W/989152-989152 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.615115;DP=3537;DP4=1395,1989,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64881e-08;MQSB=0.995098;RPB=0.029316;SGB=18.552;VDB=0.195012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.4:992962 chr04:000992962 0 W/992962-992962 FN1036-S Single Base Substitution G-C INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. W591-4-1.SNP.4:993133 chr04:000993133 0 W/993133-993133 W591-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN727-S.SNP.4:997175 chr04:000997175 0 W/997175-997175 FN727-S Single Base Substitution T-C INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN803-S.SNP.4:1004019 chr04:001004019 0 W/1004019-1004019 FN803-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g02660 retrotransposon protein, putative, unclassified SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN3760-S.SNP.4:1007487 chr04:001007487 0 W/1007487-1007487 FN3760-S SNP T -> A AC=1;AN=190;BQB=0.958727;DP=2530;DP4=1261,1213,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.27782e-05;MQSB=0.997936;RPB=0.987014;SGB=26.3271;VDB=0.585123;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.4:1015882 chr04:001015882 0 W/1015882-1015882 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.917839;DP=2576;DP4=1135,1374,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.93663e-10;MQSB=0.99796;RPB=0.826461;SGB=55.5339;VDB=0.303354;EFF=UTR_3_PRIME(MODIFIER||28||414|LOC_Os04g02680|protein_coding|CODING|LOC_Os04g02680.1|5|1) FN3815-S.SNP.4:1018068 chr04:001018068 0 W/1018068-1018068 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.964021;DP=2815;DP4=1238,1472,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83175e-05;MQSB=0.964246;RPB=0.898956;SGB=30.8803;VDB=0.387294;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q202K|414|LOC_Os04g02680|protein_coding|CODING|LOC_Os04g02680.1|4|1) FN1321-S.SNP.4:1020326 chr04:001020326 0 W/1020326-1020326 FN1321-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN-177.SNP.4:1031459 chr04:001031459 0 W/1031459-1031459 FN-177 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g02700 retrotransposon protein, putative, unclassified, expressed SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1309-S.SNP.4:1032239 chr04:001032239 0 W/1032239-1032239 FN1309-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1031-S.SNP.4:1032517 chr04:001032517 0 W/1032517-1032517 FN1031-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3330-S.SNP.4:1034336 chr04:001034336 0 W/1034336-1034336 FN3330-S SNP C -> T AC=1;AN=184;BQB=0.896166;DP=3533;DP4=1501,1965,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.23889;MQB=0.31654;MQSB=0;RPB=0.0975733;SGB=48.7425;VDB=0.620916;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1827K|2030|LOC_Os04g02710|protein_coding|CODING|LOC_Os04g02710.1|2|1) FN-7.SNP.4:1045218 chr04:001045218 0 W/1045218-1045218 FN-7 Single Base Substitution T-C INTERGENIC Homo SNo: 7, Mutant_ID: FN-7, Generation: M2, Mutations: 27, Genes: 11, Seed availability: Yes. FN671-S.SNP.4:1046544 chr04:001046544 0 W/1046544-1046544 FN671-S Single Base Substitution G-C INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN4149-S.SNP.4:1053075 chr04:001053075 0 W/1053075-1053075 FN4149-S SNP T -> C AC=2;AN=170;BQB=0.929819;DP=2655;DP4=1229,1324,7,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.95523e-10;MQSB=0.943177;RPB=0.754596;SGB=83.4133;VDB=0.854934;EFF=SPLICE_SITE_REGION(LOW||||696|LOC_Os04g02730|protein_coding|CODING|LOC_Os04g02730.1|8|1),INTRON(MODIFIER||||696|LOC_Os04g02730|protein_coding|CODING|LOC_Os04g02730.1|8|1) FN2789-S.SNP.4:1056797 chr04:001056797 0 W/1056797-1056797 FN2789-S SNP A -> T AC=2;AN=198;BQB=0.999928;DP=4147;DP4=1731,2146,14,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.90977e-13;MQSB=0.660013;RPB=0.836289;SGB=86.8856;VDB=0.51157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E318V|434|LOC_Os04g02754|protein_coding|CODING|LOC_Os04g02754.1|6|1) FN1573-S.SNP.4:1063937 chr04:001063937 0 W/1063937-1063937 FN1573-S Single Base Substitution C-T INTRON Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2689-S.SNP.4:1064683 chr04:001064683 0 W/1064683-1064683 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.751895;DP=4700;DP4=2330,2144,5,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000212766;MQB=0.00122249;MQSB=0.131528;RPB=0.835408;SGB=18.639;VDB=0.0562549;EFF=INTRON(MODIFIER||||434|LOC_Os04g02754|protein_coding|CODING|LOC_Os04g02754.1|6|1) FN3941-S.SNP.4:1078600 chr04:001078600 0 W/1078600-1078600 FN3941-S SNP A -> T AC=2;AN=168;BQB=0.821079;DP=2631;DP4=1197,1328,10,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.42186e-12;MQSB=0.963296;RPB=0.991528;SGB=39.2004;VDB=0.44113;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.4:1086695 chr04:001086695 0 W/1086695-1086695 FN2438 SNP T -> A AC=1;AN=200;BQB=0.326771;DP=3781;DP4=1482,2030,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4095e-14;MQSB=0.497423;RPB=0.426513;SGB=114.132;VDB=0.709145;EFF=INTERGENIC(MODIFIER||||||||||1) FN2253-S.SNP.4:1086984 chr04:001086984 0 W/1086984-1086984 FN2253-S SNP G -> A AC=1;AN=190;BQB=0.385206;DP=3166;DP4=1361,1500,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000333756;MQSB=0.999857;RPB=0.999655;SGB=26.3271;VDB=0.078438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.4:1099119 chr04:001099119 0 W/1099119-1099119 FN2338 SNP A -> G AC=1;AN=192;BQB=0.85521;DP=5179;DP4=2660,2196,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.41801e-12;MQSB=0.592729;RPB=0.989381;SGB=62.2505;VDB=0.252464;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.4:1110400 chr04:001110400 0 W/1110400-1110400 FN-201 Single Base Substitution A-G INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN3824-S.SNP.4:1112852 chr04:001112852 0 W/1112852-1112852 FN3824-S SNP G -> T AC=1;AN=190;BQB=0.999824;DP=3471;DP4=1611,1766,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55964e-07;MQSB=0.390423;RPB=0.547505;SGB=53.6492;VDB=0.33395;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V660|807|LOC_Os04g02850|protein_coding|CODING|LOC_Os04g02850.1|1|1) FN1309-S.SNP.4:1115679 chr04:001115679 0 W/1115679-1115679 FN1309-S Single Base Substitution T-C INTRON HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2124-S.SNP.4:1121403 chr04:001121403 0 W/1121403-1121403 FN2124-S SNP C -> A AC=1;AN=168;BQB=0.485367;DP=3552;DP4=1807,1703,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52896e-08;MQSB=0.991699;RPB=0.965914;SGB=45.0404;VDB=0.586065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S202I|245|LOC_Os04g02870|protein_coding|CODING|LOC_Os04g02870.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S202I|245|LOC_Os04g02870|protein_coding|CODING|LOC_Os04g02870.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S192I|235|LOC_Os04g02870|protein_coding|CODING|LOC_Os04g02870.3|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S192I|235|LOC_Os04g02870|protein_coding|CODING|LOC_Os04g02870.4|6|1) FN3899-S.SNP.4:1139810 chr04:001139810 0 W/1139810-1139810 FN3899-S SNP T -> A AC=1;AN=158;BQB=0.997856;DP=2523;DP4=1050,1310,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.33158e-05;MQSB=0.179071;RPB=0.913747;SGB=17.2267;VDB=0.70846;EFF=UTR_3_PRIME(MODIFIER||490||425|LOC_Os04g02900|protein_coding|CODING|LOC_Os04g02900.1|3|1),UTR_3_PRIME(MODIFIER||490||341|LOC_Os04g02900|protein_coding|CODING|LOC_Os04g02900.2|3|1) FN3797-S.SNP.4:1141181 chr04:001141181 0 W/1141181-1141181 FN3797-S SNP T -> C AC=1;AN=190;BQB=0.834095;DP=2770;DP4=1231,1426,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.69461e-05;MQSB=0.450717;RPB=0.065552;SGB=10.8904;VDB=0.0290169;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.4:1144694 chr04:001144694 0 W/1144694-1144694 FN3863-S SNP G -> C AC=1;AN=158;BQB=0.638925;DP=2836;DP4=1329,1386,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.49127e-06;MQSB=0.056561;RPB=0.83479;SGB=-2.02218;VDB=0.114178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.4:1151375 chr04:001151375 0 W/1151375-1151375 FN2124-S SNP G -> T AC=1;AN=168;BQB=0.000403015;DP=2919;DP4=1212,1667,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57038e-05;MQSB=0.972211;RPB=0.24715;SGB=-154.912;VDB=0.648097;EFF=START_GAINED(LOW||||318|LOC_Os04g02910|protein_coding|CODING|LOC_Os04g02910.3|1|1),UTR_5_PRIME(MODIFIER||28||318|LOC_Os04g02910|protein_coding|CODING|LOC_Os04g02910.3|1|1),INTRON(MODIFIER||||400|LOC_Os04g02910|protein_coding|CODING|LOC_Os04g02910.1|1|1),INTRON(MODIFIER||||266|LOC_Os04g02910|protein_coding|CODING|LOC_Os04g02910.4|1|1) FN2098-S.SNP.4:1155938 chr04:001155938 0 W/1155938-1155938 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.930432;DP=2358;DP4=681,1633,4,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.23704e-10;MQSB=0.545166;RPB=0.993045;SGB=55.3328;VDB=0.611599;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.4:1159321 chr04:001159321 0 W/1159321-1159321 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN895-S.SNP.4:1189495 chr04:001189495 0 W/1189495-1189495 FN895-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g02960 OsSub32 - Putative Subtilisin homologue, expressed SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN4151-S.SNP.4:1191125 chr04:001191125 0 W/1191125-1191125 FN4151-S SNP G -> T AC=1;AN=170;BQB=0.968462;DP=2529;DP4=1121,1290,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31613e-11;MQSB=0.949207;RPB=0.968586;SGB=52.0913;VDB=0.718985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A1341S|2731|LOC_Os04g02960|protein_coding|CODING|LOC_Os04g02960.1|11|1) FN4178-S.SNP.4:1198147 chr04:001198147 0 W/1198147-1198147 FN4178-S SNP C -> T AC=1;AN=170;BQB=0.989085;DP=2336;DP4=1072,1187,12,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52337e-11;MQSB=0.946132;RPB=0.993932;SGB=55.5339;VDB=0.93952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.4:1202107 chr04:001202107 0 W/1202107-1202107 FN3342-S SNP T -> A AC=1;AN=184;BQB=0.966426;DP=2786;DP4=1364,1335,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82857e-06;MQSB=0.971722;RPB=0.93769;SGB=35.1773;VDB=0.163984;EFF=INTRON(MODIFIER||||228|LOC_Os04g02970|protein_coding|CODING|LOC_Os04g02970.1|1|1) FN1250-S.SNP.4:1205334 chr04:001205334 0 W/1205334-1205334 FN1250-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2550-S.SNP.4:1212738 chr04:001212738 0 W/1212738-1212738 FN2550-S SNP G -> A AC=2;AN=198;BQB=0.870719;DP=3561;DP4=1520,1672,7,5;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=4.40605e-05;MQSB=0.158256;RPB=0.660334;SGB=32.9588;VDB=0.278215;EFF=INTRON(MODIFIER||||694|LOC_Os04g02980|protein_coding|CODING|LOC_Os04g02980.1|3|1) FN3856-S.SNP.4:1213471 chr04:001213471 0 W/1213471-1213471 FN3856-S SNP G -> A AC=1;AN=158;BQB=0.949541;DP=2116;DP4=1079,958,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.74807e-07;MQSB=0.969608;RPB=0.656036;SGB=38.3284;VDB=0.448352;EFF=INTRON(MODIFIER||||694|LOC_Os04g02980|protein_coding|CODING|LOC_Os04g02980.1|3|1) FN2257-S.SNP.4:1218277 chr04:001218277 0 W/1218277-1218277 FN2257-S SNP T -> C AC=1;AN=190;BQB=0.966516;DP=4881;DP4=2546,1937,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19101e-13;MQSB=0.815363;RPB=0.999862;SGB=24.3115;VDB=0.325146;EFF=INTRON(MODIFIER||||694|LOC_Os04g02980|protein_coding|CODING|LOC_Os04g02980.1|8|1) FN3570-S.SNP.4:1223030 chr04:001223030 0 W/1223030-1223030 FN3570-S SNP T -> C AC=1;AN=190;BQB=0.964255;DP=3250;DP4=1596,1487,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0196923;MQB=0.398134;MQSB=0.654206;RPB=0.522013;SGB=41.5369;VDB=0.18298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K441R|741|LOC_Os04g03000|protein_coding|CODING|LOC_Os04g03000.1|1|1) FN2095-S.SNP.4:1230336 chr04:001230336 0 W/1230336-1230336 FN2095-S SNP G -> T AC=1;AN=168;BQB=0.369771;DP=2750;DP4=1609,1093,19,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.7523e-08;MQSB=0.999999;RPB=0.951382;SGB=-126.487;VDB=0.538306;EFF=INTRON(MODIFIER||||182|LOC_Os04g03020|protein_coding|CODING|LOC_Os04g03020.1|4|1) FN_N2-29a-1.SNP.4:1230736 chr04:001230736 0 W/1230736-1230736 FN_N2-29a-1 Single Base Substitution C-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2680-S.SNP.4:1233505 chr04:001233505 0 W/1233505-1233505 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.786482;DP=4720;DP4=2195,2334,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.95009e-13;MQSB=0.996337;RPB=0.88485;SGB=69.1109;VDB=0.880738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.4:1234456 chr04:001234456 0 W/1234456-1234456 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.818883;DP=4788;DP4=2154,2375,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.85465e-21;MQSB=0.992636;RPB=0.990116;SGB=76.378;VDB=0.225494;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.4:1249099 chr04:001249099 0 W/1249099-1249099 FN1271-S Single Base Substitution G-A INTRON HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN3879-S.SNP.4:1250333 chr04:001250333 0 W/1250333-1250333 FN3879-S SNP G -> C AC=1;AN=158;BQB=0.417194;DP=2432;DP4=1343,989,20,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.58655e-12;MQSB=0.906584;RPB=0.989796;SGB=112.609;VDB=0.0355791;EFF=INTRON(MODIFIER||||752|LOC_Os04g03050|protein_coding|CODING|LOC_Os04g03050.1|3|1) FN4011-S.SNP.4:1252627 chr04:001252627 0 W/1252627-1252627 FN4011-S SNP T -> C AC=1;AN=168;BQB=0.783555;DP=2428;DP4=1217,1131,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97569e-06;MQSB=0.976729;RPB=0.0271901;SGB=56.6036;VDB=0.047676;EFF=INTRON(MODIFIER||||752|LOC_Os04g03050|protein_coding|CODING|LOC_Os04g03050.1|4|1) FN867-S.SNP.4:1253610 chr04:001253610 0 W/1253610-1253610 FN867-S Single Base Substitution G-T INTRON HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN690-S.SNP.4:1254433 chr04:001254433 0 W/1254433-1254433 FN690-S Single Base Substitution C-A INTRON HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3806-S.SNP.4:1265728 chr04:001265728 0 W/1265728-1265728 FN3806-S SNP C -> A AC=1;AN=190;BQB=0.967874;DP=2618;DP4=1258,1270,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.65111e-06;MQSB=0.974144;RPB=0.700511;SGB=44.5415;VDB=0.324876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.4:1268686 chr04:001268686 0 W/1268686-1268686 FN2481 SNP C -> A AC=1;AN=200;BQB=0.00274941;DP=5020;DP4=2450,2216,11,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0063745;MQB=4.9521e-06;MQSB=0.00403734;RPB=0.306157;SGB=-123.88;VDB=0.499342;EFF=INTRON(MODIFIER||||192|LOC_Os04g03080|protein_coding|CODING|LOC_Os04g03080.1|2|1) FN2771-S.SNP.4:1270874 chr04:001270874 0 W/1270874-1270874 FN2771-S SNP T -> C AC=1;AN=186;BQB=0.953251;DP=4279;DP4=2027,2027,8,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.48337e-08;MQSB=0.562012;RPB=0.0168583;SGB=40.149;VDB=0.0646522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.4:1277505 chr04:001277505 0 W/1277505-1277505 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.952341;DP=3986;DP4=1889,2063,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.64433e-15;MQSB=0.84129;RPB=0.769873;SGB=46.4929;VDB=0.684698;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.4:1280346 chr04:001280346 0 W/1280346-1280346 FN1416-S Single Base Substitution G-T INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN554-S.SNP.4:1286121 chr04:001286121 0 W/1286121-1286121 FN554-S Single Base Substitution T-A INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN-28.SNP.4:1288663 chr04:001288663 0 W/1288663-1288663 FN-28 Single Base Substitution C-T INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN2554-S.SNP.4:1289574 chr04:001289574 0 W/1289574-1289574 FN2554-S SNP G -> A AC=1;AN=186;BQB=0.959008;DP=3953;DP4=1850,1772,9,16;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.47523e-11;MQSB=0.349673;RPB=0.178217;SGB=50.1053;VDB=0.530194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.4:1294702 chr04:001294702 0 W/1294702-1294702 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.952749;DP=4870;DP4=2383,2262,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205339;MQB=5.31699e-13;MQSB=0.999139;RPB=0.510128;SGB=100.316;VDB=0.709078;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1337|1365|LOC_Os04g03110|protein_coding|CODING|LOC_Os04g03110.1|5|1) FN1540-S.SNP.4:1299323 chr04:001299323 0 W/1299323-1299323 FN1540-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g03120 retrotransposon protein, putative, unclassified, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2372.SNP.4:1304862 chr04:001304862 0 W/1304862-1304862 FN2372 SNP C -> G AC=2;AN=192;BQB=0.456217;DP=4898;DP4=2465,2046,32,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.16193e-24;MQSB=0.000335904;RPB=0.903369;SGB=178.79;VDB=0.355543;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.4:1304862 chr04:001304862 0 W/1304862-1304862 FN2756-S SNP C -> G AC=2;AN=200;BQB=0.321202;DP=5062;DP4=2537,2167,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2777e-22;MQSB=0.369136;RPB=0.885056;SGB=99.8245;VDB=0.153884;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.4:1304862 chr04:001304862 0 W/1304862-1304862 FN563-S Single Base Substitution C-G INTERGENIC HOMO SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN893-S.SNP.4:1304862 chr04:001304862 0 W/1304862-1304862 FN893-S Single Base Substitution C-G INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3438-S.SNP.4:1305893 chr04:001305893 0 W/1305893-1305893 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.940398;DP=2690;DP4=1251,1337,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.0179657;MQSB=0.562594;RPB=0.960229;SGB=25.1826;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.4:1307222 chr04:001307222 0 W/1307222-1307222 FN1546-S Single Base Substitution A-T INTERGENIC Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1488-S.SNP.4:1312023 chr04:001312023 0 W/1312023-1312023 FN1488-S Single Base Substitution A-G INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN_N1-150-1.SNP.4:1313720 chr04:001313720 0 W/1313720-1313720 FN_N1-150-1 Single Base Substitution G-C Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN696-S.SNP.4:1314852 chr04:001314852 0 W/1314852-1314852 FN696-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN949-S.SNP.4:1314852 chr04:001314852 0 W/1314852-1314852 FN949-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2313.SNP.4:1315496 chr04:001315496 0 W/1315496-1315496 FN2313 SNP G -> C AC=1;AN=192;BQB=0.908454;DP=4883;DP4=2212,2354,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000614376;MQB=1.78348e-07;MQSB=0.914035;RPB=0.839949;SGB=36.607;VDB=0.84699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aCc|S272T|1052|LOC_Os04g03150|protein_coding|CODING|LOC_Os04g03150.1|1|1) FN3992-S.SNP.4:1316171 chr04:001316171 0 W/1316171-1316171 FN3992-S SNP C -> T AC=1;AN=168;BQB=0.854102;DP=2229;DP4=1225,903,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91003e-08;MQSB=0.986326;RPB=0.809905;SGB=34.748;VDB=0.525775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A497V|1052|LOC_Os04g03150|protein_coding|CODING|LOC_Os04g03150.1|1|1) FN2142-S.SNP.4:1318296 chr04:001318296 0 W/1318296-1318296 FN2142-S SNP C -> A AC=1;AN=168;BQB=0.608922;DP=1478;DP4=645,793,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00202977;MQB=0.445001;MQSB=0.999929;RPB=0.936328;SGB=25.5891;VDB=0.505181;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.4:1323257 chr04:001323257 0 W/1323257-1323257 FN3448-S SNP G -> T AC=1;AN=184;BQB=0.999956;DP=3007;DP4=1304,1620,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32978e-06;MQSB=0.949632;RPB=0.0985916;SGB=25.1826;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.4:1323780 chr04:001323780 0 W/1323780-1323780 FN2284 SNP G -> A AC=1;AN=192;BQB=0.974307;DP=5206;DP4=2295,2452,13,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.67348e-19;MQSB=0.765488;RPB=0.183716;SGB=-80.293;VDB=0.111851;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.4:1329207 chr04:001329207 0 W/1329207-1329207 FN-73 Single Base Substitution T-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2204-S.SNP.4:1331266 chr04:001331266 0 W/1331266-1331266 FN2204-S SNP C -> A AC=1;AN=190;BQB=0.762946;DP=4794;DP4=2060,2290,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208594;MQB=1.01971e-12;MQSB=0.944647;RPB=0.995753;SGB=49.1985;VDB=0.712687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G466W|577|LOC_Os04g03180|protein_coding|CODING|LOC_Os04g03180.1|3|1) FN4141-S.SNP.4:1331713 chr04:001331713 0 W/1331713-1331713 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.89847;DP=2500;DP4=1166,1266,11,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39768e-10;MQSB=0.899238;RPB=0.971596;SGB=65.6427;VDB=0.260032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G317R|577|LOC_Os04g03180|protein_coding|CODING|LOC_Os04g03180.1|3|1) FN3632-S.SNP.4:1336594 chr04:001336594 0 W/1336594-1336594 FN3632-S SNP G -> A AC=1;AN=190;BQB=0.936805;DP=2827;DP4=1288,1455,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61487e-08;MQSB=0.997836;RPB=0.998569;SGB=46.7622;VDB=0.782052;EFF=UTR_5_PRIME(MODIFIER||1006||577|LOC_Os04g03180|protein_coding|CODING|LOC_Os04g03180.1|1|1) FN664-S.SNP.4:1338175 chr04:001338175 0 W/1338175-1338175 FN664-S Single Base Substitution A-G INTERGENIC HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN3659-S.SNP.4:1338487 chr04:001338487 0 W/1338487-1338487 FN3659-S SNP C -> A AC=1;AN=190;BQB=0.692572;DP=2683;DP4=1399,1194,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00052424;MQSB=0.992948;RPB=0.962093;SGB=21.8853;VDB=0.571577;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.4:1342612 chr04:001342612 0 W/1342612-1342612 FN4204-S SNP T -> C AC=1;AN=170;BQB=0.964102;DP=2510;DP4=1103,1309,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.00849e-05;MQSB=0.564034;RPB=0.967923;SGB=34.5445;VDB=0.751441;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.4:1343777 chr04:001343777 0 W/1343777-1343777 FN3778-S SNP T -> C AC=1;AN=190;BQB=0.99842;DP=2576;DP4=1179,1315,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72221e-09;MQSB=0.975843;RPB=0.377308;SGB=67.3108;VDB=0.900072;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M63T|1317|LOC_Os04g03190|protein_coding|CODING|LOC_Os04g03190.1|1|1) FN2397.SNP.4:1346261 chr04:001346261 0 W/1346261-1346261 FN2397 SNP G -> A AC=1;AN=200;BQB=0.87908;DP=4558;DP4=2208,2026,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14245e-06;MQSB=0.806069;RPB=0.896203;SGB=29.4541;VDB=0.659762;EFF=INTRON(MODIFIER||||1317|LOC_Os04g03190|protein_coding|CODING|LOC_Os04g03190.1|7|1) FN2397.SNP.4:1346262 chr04:001346262 0 W/1346262-1346262 FN2397 SNP A -> C AC=1;AN=200;BQB=0.904983;DP=4548;DP4=2185,2042,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09503e-06;MQSB=0.840153;RPB=0.984836;SGB=45.0543;VDB=0.481974;EFF=INTRON(MODIFIER||||1317|LOC_Os04g03190|protein_coding|CODING|LOC_Os04g03190.1|7|1) FN-115.SNP.4:1351102 chr04:001351102 0 W/1351102-1351102 FN-115 Single Base Substitution C-A INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-342.SNP.4:1355620 chr04:001355620 0 W/1355620-1355620 FN-342 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g03200 expressed protein SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1458-S.SNP.4:1357859 chr04:001357859 0 W/1357859-1357859 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN479-S.SNP.4:1366436 chr04:001366436 0 W/1366436-1366436 FN479-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g03220 expressed protein SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2724-S.SNP.4:1369314 chr04:001369314 0 W/1369314-1369314 FN2724-S SNP A -> G AC=1;AN=200;BQB=0.992911;DP=5183;DP4=2439,2478,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.42857e-12;MQSB=0.959066;RPB=0.882305;SGB=15.9106;VDB=0.973655;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.4:1369685 chr04:001369685 0 W/1369685-1369685 FN1670-S SNP C -> T AC=2;AN=188;BQB=0.120996;DP=3609;DP4=1811,1741,21,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.42836e-16;MQSB=0.953379;RPB=0.762921;SGB=-85.2098;VDB=0.114818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.4:1371867 chr04:001371867 0 W/1371867-1371867 FN1665-S Single Base Substitution T-A INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1096-S.SNP.4:1375164 chr04:001375164 0 W/1375164-1375164 FN1096-S Single Base Substitution C-A INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN698-S.SNP.4:1378513 chr04:001378513 0 W/1378513-1378513 FN698-S Single Base Substitution G-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1049-S.SNP.4:1381967 chr04:001381967 0 W/1381967-1381967 FN1049-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3769-S.SNP.4:1382635 chr04:001382635 0 W/1382635-1382635 FN3769-S SNP C -> A AC=1;AN=190;BQB=0.672063;DP=3005;DP4=1481,1398,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.26402e-11;MQSB=0.994001;RPB=0.952836;SGB=50.3161;VDB=0.316858;EFF=INTRON(MODIFIER||||1679|LOC_Os04g03250|protein_coding|CODING|LOC_Os04g03250.1|1|1) FN1115-S.SNP.4:1385721 chr04:001385721 0 W/1385721-1385721 FN1115-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1097-S.SNP.4:1385871 chr04:001385871 0 W/1385871-1385871 FN1097-S Single Base Substitution G-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1040-S.SNP.4:1386895 chr04:001386895 0 W/1386895-1386895 FN1040-S Single Base Substitution T-A STOP_GAINED HET LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2546-S.SNP.4:1387653 chr04:001387653 0 W/1387653-1387653 FN2546-S SNP G -> T AC=1;AN=186;BQB=0.956549;DP=3719;DP4=1704,1848,4,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000537779;MQB=1.14109e-06;MQSB=0.988774;RPB=0.840109;SGB=40.3588;VDB=0.981307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S1403I|1679|LOC_Os04g03250|protein_coding|CODING|LOC_Os04g03250.1|9|1) FN-181.SNP.4:1387689 chr04:001387689 0 W/1387689-1387689 FN-181 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g03250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1515-S.SNP.4:1390016 chr04:001390016 0 W/1390016-1390016 FN1515-S Single Base Substitution G-A INTRON HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN-30.SNP.4:1390369 chr04:001390369 0 W/1390369-1390369 FN-30 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os04g03260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3451-S.SNP.4:1391911 chr04:001391911 0 W/1391911-1391911 FN3451-S SNP T -> A AC=2;AN=184;BQB=0.999307;DP=3346;DP4=1647,1530,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.03126e-14;MQSB=0.621303;RPB=0.936979;SGB=103.004;VDB=0.431509;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.4:1394658 chr04:001394658 0 W/1394658-1394658 FN820-S Single Base Substitution G-A INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN230-S.SNP.4:1396496 chr04:001396496 0 W/1396496-1396496 FN230-S Single Base Substitution G-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN230-S.SNP.4:1396497 chr04:001396497 0 W/1396497-1396497 FN230-S Single Base Substitution A-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN1459-S.SNP.4:1398636 chr04:001398636 0 W/1398636-1398636 FN1459-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g03290 retrotransposon protein, putative, unclassified, expressed SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2160-S.SNP.4:1398712 chr04:001398712 0 W/1398712-1398712 FN2160-S SNP G -> T AC=1;AN=168;BQB=0.0134773;DP=1642;DP4=692,900,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09898e-05;MQSB=0.122564;RPB=0.995494;SGB=-36.0898;VDB=0.738171;EFF=INTRON(MODIFIER||||442|LOC_Os04g03290|protein_coding|CODING|LOC_Os04g03290.1|1|1) FN2423.SNP.4:1402851 chr04:001402851 0 W/1402851-1402851 FN2423 SNP C -> T AC=2;AN=200;BQB=0.708438;DP=4616;DP4=2192,2111,25,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47775e-25;MQSB=0.994251;RPB=0.992883;SGB=210.84;VDB=0.512325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A937T|1326|LOC_Os04g03300|protein_coding|CODING|LOC_Os04g03300.1|5|1) FN743-S.SNP.4:1405342 chr04:001405342 0 W/1405342-1405342 FN743-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g03300 retrotransposon protein, putative, unclassified, expressed SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN697-S.SNP.4:1409643 chr04:001409643 0 W/1409643-1409643 FN697-S Single Base Substitution G-T INTRON HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN3852-S.SNP.4:1410033 chr04:001410033 0 W/1410033-1410033 FN3852-S SNP T -> A AC=1;AN=158;BQB=0.99998;DP=3071;DP4=1553,1351,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.39075e-07;MQSB=0.969594;RPB=0.903833;SGB=34.0735;VDB=0.919143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.4:1418219 chr04:001418219 0 W/1418219-1418219 FN2123-S SNP T -> C AC=1;AN=168;BQB=0.822117;DP=3996;DP4=2074,1887,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000750751;MQB=6.95915e-10;MQSB=0.955556;RPB=0.37296;SGB=27.0464;VDB=0.368413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.4:1423146 chr04:001423146 0 W/1423146-1423146 FN-105 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g03330 transposon protein, putative, CACTA, En/Spm sub-class SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN442-S.SNP.4:1427875 chr04:001427875 0 W/1427875-1427875 FN442-S Single Base Substitution G-A INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-13.SNP.4:1428248 chr04:001428248 0 W/1428248-1428248 FN-13 Single Base Substitution C-T INTERGENIC HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.4:1428248 chr04:001428248 0 W/1428248-1428248 FN-13 Single Base Substitution C-T INTERGENIC Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1722-S.SNP.4:1432329 chr04:001432329 0 W/1432329-1432329 FN1722-S SNP A -> G AC=2;AN=188;BQB=0.161649;DP=2943;DP4=1430,1456,14,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01786e-11;MQSB=0.40781;RPB=0.974767;SGB=64.2256;VDB=0.534917;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L134|434|LOC_Os04g03340|protein_coding|CODING|LOC_Os04g03340.1|2|1) FN1555-S.SNP.4:1433380 chr04:001433380 0 W/1433380-1433380 FN1555-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os04g03340 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN2134-S.SNP.4:1433380 chr04:001433380 0 W/1433380-1433380 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.00633829;DP=3955;DP4=2131,1749,21,16;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0424779;MQB=0.00466478;MQSB=0.975083;RPB=0.965563;SGB=-214.311;VDB=0.618228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D431N|434|LOC_Os04g03340|protein_coding|CODING|LOC_Os04g03340.1|4|1) FN790-S.SNP.4:1433380 chr04:001433380 0 W/1433380-1433380 FN790-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g03340 transposon protein, putative, CACTA, En/Spm sub-class SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN517-S.SNP.4:1434018 chr04:001434018 0 W/1434018-1434018 FN517-S Single Base Substitution G-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3562-S.SNP.4:1434283 chr04:001434283 0 W/1434283-1434283 FN3562-S SNP T -> C AC=1;AN=188;BQB=0.9776;DP=2706;DP4=1236,1294,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.03807e-08;MQSB=0.985464;RPB=0.999901;SGB=43.0708;VDB=0.925437;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.4:1435395 chr04:001435395 0 W/1435395-1435395 FN691-S Single Base Substitution T-C INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3615-S.SNP.4:1443765 chr04:001443765 0 W/1443765-1443765 FN3615-S SNP A -> G AC=2;AN=190;BQB=0.62034;DP=2730;DP4=1304,1273,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.23011e-09;MQSB=0.99724;RPB=0.85972;SGB=94.6341;VDB=0.704617;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.4:1445771 chr04:001445771 0 W/1445771-1445771 FN2535-S SNP G -> C AC=1;AN=186;BQB=0.965457;DP=2601;DP4=1397,990,7,8;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.000384468;MQB=1.67948e-07;MQSB=0.811015;RPB=0.306402;SGB=24.1541;VDB=0.508575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.4:1449932 chr04:001449932 0 W/1449932-1449932 FN2417 SNP C -> A AC=1;AN=200;BQB=0.317734;DP=4401;DP4=2112,1870,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27018e-05;MQSB=0.605234;RPB=0.07142;SGB=-12.5051;VDB=0.801126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.4:1453397 chr04:001453397 0 W/1453397-1453397 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.80857;DP=2916;DP4=1126,1731,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.5753e-08;MQSB=0.965548;RPB=0.477606;SGB=67.1521;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.4:1453812 chr04:001453812 0 W/1453812-1453812 FN1217-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1421-S.SNP.4:1455503 chr04:001455503 0 W/1455503-1455503 FN1421-S Single Base Substitution T-A INTRON HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2640-S.SNP.4:1455549 chr04:001455549 0 W/1455549-1455549 FN2640-S SNP C -> G AC=1;AN=200;BQB=0.803446;DP=4526;DP4=2238,2029,25,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.36542e-22;MQSB=0.381338;RPB=0.969409;SGB=123.188;VDB=0.903531;EFF=INTRON(MODIFIER||||195|LOC_Os04g03400|protein_coding|CODING|LOC_Os04g03400.1|1|1) FN2139-S.SNP.4:1456422 chr04:001456422 0 W/1456422-1456422 FN2139-S SNP C -> T AC=1;AN=168;BQB=0.993825;DP=3038;DP4=1747,1250,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.67364e-18;MQSB=0.986974;RPB=0.995018;SGB=61.0778;VDB=0.140184;EFF=INTRON(MODIFIER||||195|LOC_Os04g03400|protein_coding|CODING|LOC_Os04g03400.1|2|1) FN2534-S.SNP.4:1458727 chr04:001458727 0 W/1458727-1458727 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.773525;DP=3959;DP4=1662,2005,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0186916;MQB=0.643996;MQSB=5.95705e-25;RPB=0.957205;SGB=18.9639;VDB=0.764836;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.4:1462452 chr04:001462452 0 W/1462452-1462452 FN598-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g03410 retrotransposon protein, putative, unclassified, expressed SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN895-S.SNP.4:1462452 chr04:001462452 0 W/1462452-1462452 FN895-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g03410 retrotransposon protein, putative, unclassified, expressed SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1056-S.SNP.4:1463004 chr04:001463004 0 W/1463004-1463004 FN1056-S Single Base Substitution G-A INTRON HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN2298.SNP.4:1464117 chr04:001464117 0 W/1464117-1464117 FN2298 SNP T -> C AC=1;AN=192;BQB=0.831625;DP=4554;DP4=1841,1993,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.20783e-12;MQSB=0.705525;RPB=0.150157;SGB=-8.56084;VDB=0.70708;EFF=INTRON(MODIFIER||||572|LOC_Os04g03410|protein_coding|CODING|LOC_Os04g03410.1|3|1) FN2550-S.SNP.4:1465171 chr04:001465171 0 W/1465171-1465171 FN2550-S SNP G -> A AC=1;AN=186;BQB=0.183502;DP=3250;DP4=1453,1639,3,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=7.05231e-05;MQSB=0.995996;RPB=0.880522;SGB=35.7638;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.4:1466497 chr04:001466497 0 W/1466497-1466497 FN-316 Single Base Substitution T-G INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN4300-S.SNP.4:1467679 chr04:001467679 0 W/1467679-1467679 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.82185;DP=2778;DP4=1421,1286,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.51399e-07;MQSB=0.638627;RPB=0.975552;SGB=34.878;VDB=0.499456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R465H|599|LOC_Os04g03420|protein_coding|CODING|LOC_Os04g03420.1|3|1) FN3920-S.SNP.4:1467766 chr04:001467766 0 W/1467766-1467766 FN3920-S SNP T -> A AC=2;AN=158;BQB=0.0963524;DP=2829;DP4=1402,1313,9,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.05348e-13;MQSB=0.956141;RPB=0.859262;SGB=14.4112;VDB=0.193382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q436L|599|LOC_Os04g03420|protein_coding|CODING|LOC_Os04g03420.1|3|1) FN3920-S.SNP.4:1467767 chr04:001467767 0 W/1467767-1467767 FN3920-S SNP G -> A AC=2;AN=158;BQB=0.709793;DP=2829;DP4=1390,1347,9,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.4657e-14;MQSB=0.913077;RPB=0.947299;SGB=42.7743;VDB=0.484771;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q436*|599|LOC_Os04g03420|protein_coding|CODING|LOC_Os04g03420.1|3|1) FN712-S.SNP.4:1468057 chr04:001468057 0 W/1468057-1468057 FN712-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g03420 retrotransposon protein, putative, unclassified, expressed SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2599-S.SNP.4:1468273 chr04:001468273 0 W/1468273-1468273 FN2599-S SNP T -> C AC=1;AN=186;BQB=0.793685;DP=3294;DP4=1384,1637,5,8;HOB=5.78101e-05;ICB=0.000116242;MQ=46;MQ0F=0;MQB=1.27252e-06;MQSB=3.47587e-22;RPB=0.734656;SGB=36.5539;VDB=0.143159;EFF=INTRON(MODIFIER||||599|LOC_Os04g03420|protein_coding|CODING|LOC_Os04g03420.1|2|1) FN2272-S.SNP.4:1474122 chr04:001474122 0 W/1474122-1474122 FN2272-S SNP C -> T AC=2;AN=190;BQB=0.719828;DP=4915;DP4=1942,2513,30,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.25961e-31;MQSB=0.988146;RPB=0.749902;SGB=75.5894;VDB=0.761135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.4:1474122 chr04:001474122 0 W/1474122-1474122 FN3554-S SNP C -> T AC=1;AN=188;BQB=0.969665;DP=2675;DP4=1059,1490,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.40757e-09;MQSB=0.993651;RPB=0.655535;SGB=46.6141;VDB=0.213967;EFF=INTERGENIC(MODIFIER||||||||||1) FN415-S.SNP.4:1474122 chr04:001474122 0 W/1474122-1474122 FN415-S Single Base Substitution C-T INTERGENIC HOMO SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1520-S.SNP.4:1476174 chr04:001476174 0 W/1476174-1476174 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN804-S.SNP.4:1480339 chr04:001480339 0 W/1480339-1480339 FN804-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN4271-S.SNP.4:1481509 chr04:001481509 0 W/1481509-1481509 FN4271-S SNP C -> T AC=1;AN=170;BQB=0.920855;DP=2990;DP4=1353,1559,4,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.49378e-10;MQSB=0.997386;RPB=0.626962;SGB=52.0913;VDB=0.626321;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P489|517|LOC_Os04g03440|protein_coding|CODING|LOC_Os04g03440.1|10|1) FN3369-S.SNP.4:1481868 chr04:001481868 0 W/1481868-1481868 FN3369-S SNP A -> C AC=1;AN=184;BQB=0.638204;DP=3381;DP4=1432,1759,16,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61778e-16;MQSB=0.966268;RPB=0.565397;SGB=121.091;VDB=0.401004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.4:1483226 chr04:001483226 0 W/1483226-1483226 FN3811-S SNP A -> T AC=2;AN=190;BQB=0.984789;DP=2790;DP4=1226,1449,24,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.54948e-21;MQSB=0.934565;RPB=0.996162;SGB=167.496;VDB=0.47275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.4:1486204 chr04:001486204 0 W/1486204-1486204 FN1368-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g03450 retrotransposon protein, putative, unclassified, expressed SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2621-S.SNP.4:1488522 chr04:001488522 0 W/1488522-1488522 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.998021;DP=4688;DP4=2240,2204,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.22649e-13;MQSB=0.848038;RPB=0.488008;SGB=61.9006;VDB=0.969249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G849E|1610|LOC_Os04g03450|protein_coding|CODING|LOC_Os04g03450.1|6|1) FN2447.SNP.4:1498360 chr04:001498360 0 W/1498360-1498360 FN2447 SNP G -> T AC=1;AN=200;BQB=0.311162;DP=4092;DP4=2173,1578,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29787e-16;MQSB=0.012442;RPB=0.896198;SGB=55.5366;VDB=0.704513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.4:1498361 chr04:001498361 0 W/1498361-1498361 FN2447 SNP G -> A AC=1;AN=200;BQB=0.726074;DP=4085;DP4=2171,1604,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000244798;MQB=2.99176e-16;MQSB=0.00727629;RPB=0.81668;SGB=55.5366;VDB=0.592816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.4:1499854 chr04:001499854 0 W/1499854-1499854 FN3982-S SNP C -> G AC=1;AN=168;BQB=0.996865;DP=2752;DP4=1351,1296,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.04907e-11;MQSB=0.940412;RPB=0.331373;SGB=27.0464;VDB=0.0642819;EFF=INTRON(MODIFIER||||1486|LOC_Os04g03470|protein_coding|CODING|LOC_Os04g03470.1|1|1) FN2434.SNP.4:1500985 chr04:001500985 0 W/1500985-1500985 FN2434 SNP C -> T AC=1;AN=200;BQB=0.472913;DP=4262;DP4=1836,2048,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16564e-05;MQSB=0.994089;RPB=0.923056;SGB=6.03876;VDB=0.316575;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S506F|1486|LOC_Os04g03470|protein_coding|CODING|LOC_Os04g03470.1|2|1) FN3326-S.SNP.4:1500985 chr04:001500985 0 W/1500985-1500985 FN3326-S SNP C -> T AC=2;AN=184;BQB=0.747115;DP=2738;DP4=1241,1365,12,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32022e-14;MQSB=0.995341;RPB=0.588812;SGB=130.135;VDB=0.587305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S506F|1486|LOC_Os04g03470|protein_coding|CODING|LOC_Os04g03470.1|2|1) FN_949-1.SNP.4:1500985 chr04:001500985 0 W/1500985-1500985 FN_949-1 Single Base Substitution C-T HET LOC_Os04g03470 retrotransposon protein, putative, unclassified, expressed SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN405-S.SNP.4:1501032 chr04:001501032 0 W/1501032-1501032 FN405-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3860-S.SNP.4:1504977 chr04:001504977 0 W/1504977-1504977 FN3860-S SNP T -> C AC=1;AN=158;BQB=0.951588;DP=2204;DP4=1022,1060,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000271839;MQSB=0.229819;RPB=0.968556;SGB=37.4429;VDB=0.95886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.4:1507112 chr04:001507112 0 W/1507112-1507112 FN3293-S SNP G -> T AC=1;AN=184;BQB=0.997658;DP=3338;DP4=1514,1721,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000599161;MQB=1.52762e-06;MQSB=0.662935;RPB=0.955153;SGB=28.7043;VDB=0.900735;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.4:1507346 chr04:001507346 0 W/1507346-1507346 FN3753-S SNP C -> T AC=1;AN=190;BQB=0.676199;DP=1956;DP4=812,1036,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00153374;MQB=0.00822181;MQSB=0.699871;RPB=0.907624;SGB=49.0954;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.4:1511023 chr04:001511023 0 W/1511023-1511023 FN1080-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g03490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3427-S.SNP.4:1514297 chr04:001514297 0 W/1514297-1514297 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.975516;DP=2875;DP4=1577,1232,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000695652;MQB=0.000437154;MQSB=0.38577;RPB=0.448158;SGB=30.6558;VDB=0.299782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.4:1517874 chr04:001517874 0 W/1517874-1517874 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.934672;DP=2774;DP4=1302,1380,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.4335e-07;MQSB=0.93809;RPB=0.0883777;SGB=44.5415;VDB=0.317696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.4:1517938 chr04:001517938 0 W/1517938-1517938 FN3557-S SNP T -> G AC=2;AN=188;BQB=0.924562;DP=2793;DP4=1336,1351,18,16;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000716076;MQB=2.12839e-12;MQSB=0.686173;RPB=0.851947;SGB=71.8555;VDB=0.55722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.4:1518306 chr04:001518306 0 W/1518306-1518306 FN1324-S Single Base Substitution C-T INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2789-S.SNP.4:1521115 chr04:001521115 0 W/1521115-1521115 FN2789-S SNP G -> A AC=2;AN=186;BQB=0.654007;DP=3352;DP4=1376,1748,14,21;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=9.3065e-19;MQSB=0.888667;RPB=0.99659;SGB=76.0565;VDB=0.603155;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.4:1528263 chr04:001528263 0 W/1528263-1528263 FN-44 Single Base Substitution C-T INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN3115-S.SNP.4:1528263 chr04:001528263 0 W/1528263-1528263 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.360432;DP=2639;DP4=1274,1269,2,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87006e-06;MQSB=0.879676;RPB=0.992815;SGB=23.2751;VDB=0.426105;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.4:1528263 chr04:001528263 0 W/1528263-1528263 FN849-S Single Base Substitution C-T INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2278-S.SNP.4:1531445 chr04:001531445 0 W/1531445-1531445 FN2278-S SNP T -> C AC=1;AN=190;BQB=0.0795333;DP=3730;DP4=1657,1336,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00080429;MQB=0.0191079;MQSB=0.917667;RPB=0.63335;SGB=2.55724;VDB=0.643937;EFF=UTR_5_PRIME(MODIFIER||33||125|LOC_Os04g03520|protein_coding|CODING|LOC_Os04g03520.1|1|1) FN4072-S.SNP.4:1532155 chr04:001532155 0 W/1532155-1532155 FN4072-S SNP T -> G AC=1;AN=182;BQB=0.859032;DP=3273;DP4=1455,1724,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.68819e-09;MQSB=0.998756;RPB=0.90335;SGB=25.655;VDB=0.0574661;EFF=UTR_3_PRIME(MODIFIER||300||125|LOC_Os04g03520|protein_coding|CODING|LOC_Os04g03520.1|1|1) FN4072-S.SNP.4:1532156 chr04:001532156 0 W/1532156-1532156 FN4072-S SNP A -> T AC=1;AN=182;BQB=0.997544;DP=3263;DP4=1439,1722,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.64381e-09;MQSB=0.999856;RPB=0.978799;SGB=57.644;VDB=0.189882;EFF=UTR_3_PRIME(MODIFIER||301||125|LOC_Os04g03520|protein_coding|CODING|LOC_Os04g03520.1|1|1) FN-191.SNP.4:1532897 chr04:001532897 0 W/1532897-1532897 FN-191 Single Base Substitution G-C INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN2291.SNP.4:1537358 chr04:001537358 0 W/1537358-1537358 FN2291 SNP C -> A AC=1;AN=192;BQB=0.525962;DP=4727;DP4=2218,2230,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.93769e-12;MQSB=0.801338;RPB=0.998776;SGB=21.4339;VDB=0.574319;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-295.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN-295 Single Base Substitution C-T INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1623-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN1623-S Single Base Substitution C-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2113-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.0171408;DP=2985;DP4=1306,1615,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85936e-05;MQSB=0.991206;RPB=0.253597;SGB=-115.779;VDB=0.156432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN2274-S SNP C -> T AC=2;AN=190;BQB=0.965532;DP=4382;DP4=1968,2071,34,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.1077e-33;MQSB=0.594697;RPB=0.754515;SGB=213.794;VDB=0.19302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.172685;DP=4649;DP4=2107,2238,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71691e-06;MQSB=0.998738;RPB=0.594173;SGB=19.0642;VDB=0.338137;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN3566-S SNP C -> T AC=2;AN=188;BQB=0.785923;DP=2656;DP4=1229,1350,7,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.43247e-09;MQSB=0.840307;RPB=0.866448;SGB=76.2387;VDB=0.948104;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN3906-S SNP C -> T AC=1;AN=158;BQB=0.850264;DP=2194;DP4=987,1125,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.03303e-07;MQSB=0.976142;RPB=0.677772;SGB=27.3346;VDB=0.445356;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.4:1538725 chr04:001538725 0 W/1538725-1538725 FN4125-S SNP C -> T AC=2;AN=182;BQB=0.975622;DP=2782;DP4=1238,1464,11,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.36223e-11;MQSB=0.819427;RPB=0.686379;SGB=60.2037;VDB=0.239048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.4:1545009 chr04:001545009 0 W/1545009-1545009 FN3554-S SNP T -> A AC=1;AN=188;BQB=0.902075;DP=2689;DP4=1406,1154,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.11256e-06;MQSB=0.257698;RPB=0.711601;SGB=18.4463;VDB=0.845562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.4:1546795 chr04:001546795 0 W/1546795-1546795 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.68294;DP=3044;DP4=1326,1644,16,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.31468e-16;MQSB=0.823901;RPB=0.898446;SGB=22.7913;VDB=0.317921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.4:1546796 chr04:001546796 0 W/1546796-1546796 FN2098-S SNP C -> A AC=1;AN=168;BQB=0.981878;DP=3050;DP4=1339,1640,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.60156e-13;MQSB=0.815946;RPB=0.853317;SGB=53.7853;VDB=0.454298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.4:1552834 chr04:001552834 0 W/1552834-1552834 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.979083;DP=4141;DP4=2067,1780,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0697899;MQB=0.767827;MQSB=8.01554e-28;RPB=0.277054;SGB=29.3637;VDB=0.739017;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W1890*|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|4|1) FN2589-S.SNP.4:1552835 chr04:001552835 0 W/1552835-1552835 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.697305;DP=4146;DP4=2062,1777,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0706705;MQB=0.803949;MQSB=2.02297e-29;RPB=0.471763;SGB=29.3637;VDB=0.63445;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1890*|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|4|1) FN3629-S.SNP.4:1553566 chr04:001553566 0 W/1553566-1553566 FN3629-S SNP A -> C AC=1;AN=190;BQB=0.86392;DP=2557;DP4=1269,1166,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0700039;MQB=0.857893;MQSB=1.49548e-07;RPB=0.661197;SGB=25.439;VDB=0.477569;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acG|T1677|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|3|1) FN3558-S.SNP.4:1553878 chr04:001553878 0 W/1553878-1553878 FN3558-S SNP C -> T AC=2;AN=188;BQB=0.871012;DP=4273;DP4=2233,1925,29,16;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.033934;MQB=4.27799e-15;MQSB=5.27269e-05;RPB=0.844693;SGB=149.37;VDB=0.716725;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1573|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|3|1) FN1624-S.SNP.4:1553940 chr04:001553940 0 W/1553940-1553940 FN1624-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os04g03560 retrotransposon protein, putative, unclassified, expressed SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2088-S.SNP.4:1554252 chr04:001554252 0 W/1554252-1554252 FN2088-S SNP G -> A AC=2;AN=168;BQB=0.366793;DP=1997;DP4=968,949,22,15;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00550826;MQB=9.52119e-10;MQSB=0.121759;RPB=0.667667;SGB=85.0499;VDB=0.602538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1449S|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|3|1) FN3454-S.SNP.4:1554848 chr04:001554848 0 W/1554848-1554848 FN3454-S SNP G -> A AC=1;AN=184;BQB=0.934182;DP=4972;DP4=2207,2661,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0494771;MQB=0.20098;MQSB=0;RPB=0.50714;SGB=14.4113;VDB=0.000925835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S1250L|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|3|1) FN3528-S.SNP.4:1555240 chr04:001555240 0 W/1555240-1555240 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.986473;DP=3431;DP4=1788,1579,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00174876;MQB=2.42458e-11;MQSB=0.426988;RPB=0.290174;SGB=64.3306;VDB=0.00402337;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1119|1900|LOC_Os04g03560|protein_coding|CODING|LOC_Os04g03560.1|3|1) FN4279-S.SNP.4:1562255 chr04:001562255 0 W/1562255-1562255 FN4279-S SNP G -> A AC=1;AN=170;BQB=0.664455;DP=2976;DP4=1413,1485,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.92158e-06;MQSB=0.999992;RPB=0.946219;SGB=27.9928;VDB=0.0617175;EFF=UTR_3_PRIME(MODIFIER||224||685|LOC_Os04g03579|protein_coding|CODING|LOC_Os04g03579.1|3|1) FN2541-S.SNP.4:1568678 chr04:001568678 0 W/1568678-1568678 FN2541-S SNP G -> C AC=1;AN=186;BQB=0.988351;DP=3485;DP4=1591,1744,6,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.02661e-07;MQSB=0.948438;RPB=0.98678;SGB=54.144;VDB=0.862629;EFF=INTRON(MODIFIER||||685|LOC_Os04g03579|protein_coding|CODING|LOC_Os04g03579.1|1|1) 706-1.SNP.4:1574571 chr04:001574571 0 W/1574571-1574571 706-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g03600 retrotransposon protein, putative, unclassified, expressed SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. W706-3-1.SNP.4:1574571 chr04:001574571 0 W/1574571-1574571 W706-3-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g03600 retrotransposon protein, putative, unclassified, expressed SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3665-S.SNP.4:1582040 chr04:001582040 0 W/1582040-1582040 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.184817;DP=4444;DP4=2016,2216,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.090009;MQB=0.215706;MQSB=0.171669;RPB=0.322338;SGB=100.07;VDB=0.199797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V577I|1017|LOC_Os04g03620|protein_coding|CODING|LOC_Os04g03620.1|2|1) FN2564-S.SNP.4:1584751 chr04:001584751 0 W/1584751-1584751 FN2564-S SNP C -> T AC=1;AN=198;BQB=0.389933;DP=3447;DP4=1483,1158,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0121845;MQB=0.622543;MQSB=0;RPB=0.876934;SGB=5.98864;VDB=0.874002;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.4:1589023 chr04:001589023 0 W/1589023-1589023 FN917-S Single Base Substitution A-G INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1134-S.SNP.4:1593755 chr04:001593755 0 W/1593755-1593755 FN1134-S Single Base Substitution A-C INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN3310-S.SNP.4:1594507 chr04:001594507 0 W/1594507-1594507 FN3310-S SNP T -> C AC=1;AN=184;BQB=0.973779;DP=2863;DP4=1463,1288,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.1504e-07;MQSB=0.875071;RPB=0.208803;SGB=44.2207;VDB=0.345322;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.4:1594570 chr04:001594570 0 W/1594570-1594570 FN868-S Single Base Substitution T-C INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN_N1-150-1.SNP.4:1597540 chr04:001597540 0 W/1597540-1597540 FN_N1-150-1 Single Base Substitution G-C HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3788-S.SNP.4:1598047 chr04:001598047 0 W/1598047-1598047 FN3788-S SNP G -> T AC=2;AN=190;BQB=0.996771;DP=2809;DP4=1303,1434,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.0942e-11;MQSB=0.953437;RPB=0.70229;SGB=80.9724;VDB=0.82193;EFF=INTRON(MODIFIER||||1632|LOC_Os04g03630|protein_coding|CODING|LOC_Os04g03630.1|5|1) FN1725-S.SNP.4:1599128 chr04:001599128 0 W/1599128-1599128 FN1725-S SNP A -> G AC=1;AN=188;BQB=0.175202;DP=3415;DP4=1534,1834,15,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.52773e-12;MQSB=0.987926;RPB=0.96447;SGB=-76.4696;VDB=0.754273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I1249T|1632|LOC_Os04g03630|protein_coding|CODING|LOC_Os04g03630.1|5|1) FN2441.SNP.4:1603766 chr04:001603766 0 W/1603766-1603766 FN2441 SNP G -> A AC=1;AN=200;BQB=0.839884;DP=4405;DP4=2212,1902,7,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00340522;MQB=3.72274e-05;MQSB=0.189864;RPB=0.514627;SGB=51.0851;VDB=0.706336;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN-292 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-315.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN-315 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN-387 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1369-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN1369-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN1553-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN1553-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2120-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN2120-S SNP G -> A AC=2;AN=168;BQB=0.707362;DP=3873;DP4=2000,1790,35,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000516396;MQB=7.05854e-30;MQSB=0.894376;RPB=0.771226;SGB=-61.7031;VDB=0.932184;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D758|853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|6|1) FN2280-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN2280-S SNP G -> A AC=1;AN=190;BQB=0.162468;DP=4710;DP4=2142,2264,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81612e-10;MQSB=0.582073;RPB=0.699591;SGB=33.8752;VDB=0.707777;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D758|853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|6|1) FN3341-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN3341-S SNP G -> A AC=2;AN=184;BQB=0.985677;DP=2566;DP4=1228,1252,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.05257e-08;MQSB=0.857536;RPB=0.687821;SGB=42.7914;VDB=0.650596;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D758|853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|6|1) FN3488-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN3488-S SNP G -> A AC=1;AN=184;BQB=0.630946;DP=2411;DP4=1132,1223,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000717643;MQSB=0.934599;RPB=0.998161;SGB=35.1773;VDB=0.178903;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D758|853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|6|1) FN3892-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN3892-S SNP G -> A AC=2;AN=158;BQB=0.953517;DP=2091;DP4=972,1042,8,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.10831e-09;MQSB=0.99965;RPB=0.991436;SGB=60.1755;VDB=0.754234;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D758|853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|6|1) FN474-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN474-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN519-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN519-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN855-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN855-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN874-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN874-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN949-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN975-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.4:1605980 chr04:001605980 0 W/1605980-1605980 FN_935-1 Single Base Substitution G-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN-110.SNP.4:1606443 chr04:001606443 0 W/1606443-1606443 FN-110 Single Base Substitution G-T INTRON HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3439-S.SNP.4:1606769 chr04:001606769 0 W/1606769-1606769 FN3439-S SNP T -> C AC=1;AN=184;BQB=0.854102;DP=2623;DP4=1260,1282,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000381243;MQB=7.229e-06;MQSB=0.383719;RPB=0.670542;SGB=35.7479;VDB=0.865758;EFF=INTRON(MODIFIER||||853|LOC_Os04g03640|protein_coding|CODING|LOC_Os04g03640.1|5|1) FN3401-S.SNP.4:1615843 chr04:001615843 0 W/1615843-1615843 FN3401-S SNP A -> C AC=1;AN=184;BQB=0.935813;DP=2411;DP4=1341,879,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.62903e-05;MQSB=0.999998;RPB=0.988272;SGB=-0.806606;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1249-S.SNP.4:1617378 chr04:001617378 0 W/1617378-1617378 FN1249-S Single Base Substitution G-A INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN3530-S.SNP.4:1622383 chr04:001622383 0 W/1622383-1622383 FN3530-S SNP G -> T AC=1;AN=188;BQB=0.999914;DP=2996;DP4=1375,1556,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0153538;MQB=0.0265881;MQSB=0.0412705;RPB=0.617029;SGB=64.3306;VDB=0.777572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P249T|324|LOC_Os04g03680|protein_coding|CODING|LOC_Os04g03680.1|2|1) FN2257-S.SNP.4:1623788 chr04:001623788 0 W/1623788-1623788 FN2257-S SNP C -> T AC=1;AN=190;BQB=0.827882;DP=2943;DP4=1372,1292,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00237853;MQB=9.3813e-06;MQSB=0.000482897;RPB=0.400755;SGB=76.4186;VDB=0.113529;EFF=INTRON(MODIFIER||||324|LOC_Os04g03680|protein_coding|CODING|LOC_Os04g03680.1|1|1) FN1380-S.SNP.4:1626356 chr04:001626356 0 W/1626356-1626356 FN1380-S Single Base Substitution T-C INTRON HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3581-S.SNP.4:1627048 chr04:001627048 0 W/1627048-1627048 FN3581-S SNP C -> A AC=1;AN=190;BQB=0.587269;DP=2510;DP4=1264,1113,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00127294;MQSB=0.0510616;RPB=0.999859;SGB=25.439;VDB=0.982462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3601-S.SNP.4:1630246 chr04:001630246 0 W/1630246-1630246 FN3601-S SNP G -> C AC=1;AN=190;BQB=0.764115;DP=2594;DP4=1216,1287,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000385505;MQB=3.29534e-06;MQSB=0.983027;RPB=0.696239;SGB=13.4344;VDB=0.301623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I319M|741|LOC_Os04g03690|protein_coding|CODING|LOC_Os04g03690.1|2|1) FN4163-S.SNP.4:1631379 chr04:001631379 0 W/1631379-1631379 FN4163-S SNP C -> T AC=1;AN=170;BQB=0.78705;DP=2510;DP4=1256,1186,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0219124;MQB=0.00477597;MQSB=0.157453;RPB=0.9125;SGB=27.9928;VDB=0.270781;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R11|741|LOC_Os04g03690|protein_coding|CODING|LOC_Os04g03690.1|1|1) FN2534-S.SNP.4:1632060 chr04:001632060 0 W/1632060-1632060 FN2534-S SNP G -> A AC=1;AN=186;BQB=0.986687;DP=3073;DP4=1316,1536,8,4;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.0022779;MQB=1.34421e-06;MQSB=0.909405;RPB=0.74296;SGB=32.9588;VDB=0.189099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.4:1633063 chr04:001633063 0 W/1633063-1633063 FN2395 SNP C -> A AC=1;AN=200;BQB=0.704067;DP=4530;DP4=2115,2044,12,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00264901;MQB=0.00133009;MQSB=0.027296;RPB=0.954895;SGB=-8.26887;VDB=0.158277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.4:1633650 chr04:001633650 0 W/1633650-1633650 FN2326 SNP T -> A AC=2;AN=192;BQB=0.999262;DP=4187;DP4=2048,1779,22,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000238834;MQB=2.10313e-18;MQSB=0.0342924;RPB=0.947876;SGB=0.468728;VDB=0.386161;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.4:1636523 chr04:001636523 0 W/1636523-1636523 FN-160 Single Base Substitution G-T INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN4106-S.SNP.4:1649517 chr04:001649517 0 W/1649517-1649517 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.952244;DP=3211;DP4=1679,1449,12,2;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.000622859;MQB=0.207369;MQSB=0.00695617;RPB=0.263913;SGB=57.644;VDB=0.186543;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M332I|567|LOC_Os04g03720|protein_coding|CODING|LOC_Os04g03720.1|1|1) FN3302-S.SNP.4:1649848 chr04:001649848 0 W/1649848-1649848 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.370065;DP=3471;DP4=1956,1439,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000223975;MQSB=0.741654;RPB=0.918073;SGB=39.699;VDB=0.382624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T222I|567|LOC_Os04g03720|protein_coding|CODING|LOC_Os04g03720.1|1|1) FN544-S.SNP.4:1652618 chr04:001652618 0 W/1652618-1652618 FN544-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN-189.SNP.4:1653038 chr04:001653038 0 W/1653038-1653038 FN-189 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g03740 expressed protein SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN500-S.SNP.4:1657653 chr04:001657653 0 W/1657653-1657653 FN500-S Single Base Substitution G-A INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4167-S.SNP.4:1660776 chr04:001660776 0 W/1660776-1660776 FN4167-S SNP C -> G AC=2;AN=170;BQB=0.981961;DP=2898;DP4=1424,1371,9,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.27594e-14;MQSB=0.969576;RPB=0.672065;SGB=69.3045;VDB=0.658928;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.4:1660776 chr04:001660776 0 W/1660776-1660776 FN418-S Single Base Substitution C-G INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN765-S.SNP.4:1664330 chr04:001664330 0 W/1664330-1664330 FN765-S Single Base Substitution G-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1575-S.SNP.4:1666018 chr04:001666018 0 W/1666018-1666018 FN1575-S Single Base Substitution G-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN768-S.SNP.4:1669818 chr04:001669818 0 W/1669818-1669818 FN768-S Single Base Substitution G-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2650-S.SNP.4:1670886 chr04:001670886 0 W/1670886-1670886 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.820535;DP=5338;DP4=2515,2479,12,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0121768;MQB=1.45139e-07;MQSB=0.998083;RPB=0.976044;SGB=79.9264;VDB=0.0919914;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.4:1675668 chr04:001675668 0 W/1675668-1675668 FN810-S Single Base Substitution T-G INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2629-S.SNP.4:1680115 chr04:001680115 0 W/1680115-1680115 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.492875;DP=4128;DP4=1765,2080,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17058e-07;MQSB=0.636437;RPB=0.998414;SGB=49.6594;VDB=0.794826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.4:1683508 chr04:001683508 0 W/1683508-1683508 FN2434 SNP C -> T AC=1;AN=200;BQB=0.840789;DP=4089;DP4=1687,2223,4,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00010799;MQSB=0.0245021;RPB=0.993401;SGB=26.6347;VDB=0.559649;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.4:1683832 chr04:001683832 0 W/1683832-1683832 FN_807-3-1 Single Base Substitution G-A HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2353.SNP.4:1684302 chr04:001684302 0 W/1684302-1684302 FN2353 SNP C -> T AC=2;AN=192;BQB=0.0650883;DP=3193;DP4=1007,1943,7,21;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.58558e-10;MQSB=2.94032e-33;RPB=0.939632;SGB=24.5626;VDB=0.847029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.4:1687104 chr04:001687104 0 W/1687104-1687104 FN3950-S SNP C -> T AC=2;AN=168;BQB=0.991479;DP=3098;DP4=1256,1669,24,23;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0319561;MQB=7.29319e-05;MQSB=3.05749e-05;RPB=0.521701;SGB=202.821;VDB=0.147432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.4:1689146 chr04:001689146 0 W/1689146-1689146 FN3911-S SNP C -> T AC=1;AN=158;BQB=0.674267;DP=2298;DP4=969,1193,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000435161;MQB=7.08871e-08;MQSB=0.864239;RPB=0.832301;SGB=21.4493;VDB=0.571084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R139W|266|LOC_Os04g03780|protein_coding|CODING|LOC_Os04g03780.1|1|1) FN2286.SNP.4:1690863 chr04:001690863 0 W/1690863-1690863 FN2286 SNP T -> A AC=1;AN=192;BQB=0.78171;DP=4683;DP4=2284,2075,15,16;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00320307;MQB=0.00460881;MQSB=0.898668;RPB=0.69748;SGB=-41.8626;VDB=0.655145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K1722I|1958|LOC_Os04g03790|protein_coding|CODING|LOC_Os04g03790.1|4|1) FN2617-S.SNP.4:1695517 chr04:001695517 0 W/1695517-1695517 FN2617-S SNP C -> G AC=1;AN=198;BQB=0.97155;DP=3522;DP4=1714,1617,17,10;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.060477;MQB=0.634309;MQSB=0.0282228;RPB=0.495969;SGB=86.8856;VDB=0.360385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E263D|1958|LOC_Os04g03790|protein_coding|CODING|LOC_Os04g03790.1|1|1) FN3820-S.SNP.4:1698657 chr04:001698657 0 W/1698657-1698657 FN3820-S SNP G -> A AC=1;AN=190;BQB=0.955271;DP=2673;DP4=1319,1237,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.35154e-05;MQSB=0.998318;RPB=0.828725;SGB=26.3271;VDB=0.604698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.4:1711418 chr04:001711418 0 W/1711418-1711418 FN2327 SNP C -> T AC=1;AN=192;BQB=0.299731;DP=5094;DP4=2367,2413,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.35842e-12;MQSB=0.129413;RPB=0.996271;SGB=-10.8182;VDB=0.748173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.4:1718910 chr04:001718910 0 W/1718910-1718910 FN2300 SNP T -> C AC=1;AN=192;BQB=0.990744;DP=4581;DP4=2147,2216,7,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.49642e-13;MQSB=0.940603;RPB=0.272129;SGB=71.8591;VDB=0.0716025;EFF=INTRON(MODIFIER||||744|LOC_Os04g03810|protein_coding|CODING|LOC_Os04g03810.1|7|1) FN1416-S.SNP.4:1722598 chr04:001722598 0 W/1722598-1722598 FN1416-S Single Base Substitution C-T INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3955-S.SNP.4:1723377 chr04:001723377 0 W/1723377-1723377 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.903255;DP=2434;DP4=1050,1301,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53152e-07;MQSB=0.931894;RPB=0.966119;SGB=27.8864;VDB=0.0467892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A31T|673|LOC_Os04g03830|protein_coding|CODING|LOC_Os04g03830.1|1|1) FN3955-S.SNP.4:1723378 chr04:001723378 0 W/1723378-1723378 FN3955-S SNP C -> A AC=1;AN=168;BQB=0.837223;DP=2438;DP4=1048,1300,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.92437e-08;MQSB=0.979471;RPB=0.999991;SGB=31.3172;VDB=0.103498;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A31D|673|LOC_Os04g03830|protein_coding|CODING|LOC_Os04g03830.1|1|1) FN914-S.SNP.4:1724403 chr04:001724403 0 W/1724403-1724403 FN914-S Single Base Substitution T-C INTRON HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN4260-S.SNP.4:1727869 chr04:001727869 0 W/1727869-1727869 FN4260-S SNP T -> C AC=1;AN=170;BQB=0.998832;DP=2195;DP4=838,1285,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.86003e-13;MQSB=0.192501;RPB=0.149156;SGB=87.856;VDB=0.0851937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.4:1746972 chr04:001746972 0 W/1746972-1746972 FN2580-S SNP T -> C AC=1;AN=198;BQB=0.986441;DP=3910;DP4=1748,1951,12,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33437e-17;MQSB=0.968717;RPB=0.890582;SGB=127.666;VDB=0.43885;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.4:1747520 chr04:001747520 0 W/1747520-1747520 FN4230-S SNP G -> T AC=1;AN=170;BQB=0.884289;DP=1951;DP4=915,979,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00512558;MQB=0.000197555;MQSB=3.04462e-12;RPB=0.998751;SGB=14.9986;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.4:1756902 chr04:001756902 0 W/1756902-1756902 FN1736-S SNP T -> G AC=1;AN=188;BQB=0.889377;DP=3949;DP4=2021,1890,17,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.48714e-14;MQSB=0.999925;RPB=0.960221;SGB=89.1337;VDB=0.99664;EFF=INTRON(MODIFIER||||988|LOC_Os04g03860|protein_coding|CODING|LOC_Os04g03860.1|5|1) FN514-S.SNP.4:1781137 chr04:001781137 0 W/1781137-1781137 FN514-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g03890 cytochrome P450, putative, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN589-S.SNP.4:1784365 chr04:001784365 0 W/1784365-1784365 FN589-S Single Base Substitution C-T INTERGENIC HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-163.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN-163 Single Base Substitution C-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-272.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN-272 Single Base Substitution C-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1557-S.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN1557-S Single Base Substitution C-T INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3758-S.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.936698;DP=2764;DP4=1358,1299,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.20728e-05;MQSB=0.998693;RPB=0.998316;SGB=26.3271;VDB=0.86799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN3999-S SNP C -> T AC=2;AN=168;BQB=0.836955;DP=2610;DP4=1241,1266,8,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.18293e-05;MQSB=0.976476;RPB=0.909744;SGB=43.3113;VDB=0.158821;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN756-S.SNP.4:1787471 chr04:001787471 0 W/1787471-1787471 FN756-S Single Base Substitution C-T INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN-388.SNP.4:1788479 chr04:001788479 0 W/1788479-1788479 FN-388 Single Base Substitution A-G INTERGENIC HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN2334.SNP.4:1798478 chr04:001798478 0 W/1798478-1798478 FN2334 SNP C -> T AC=1;AN=192;BQB=0.573019;DP=4930;DP4=2284,2395,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.4141e-10;MQSB=0.804025;RPB=0.991943;SGB=57.6018;VDB=0.658057;EFF=INTRON(MODIFIER||||1570|LOC_Os04g03940|protein_coding|CODING|LOC_Os04g03940.1|2|1) FN3432-S.SNP.4:1801419 chr04:001801419 0 W/1801419-1801419 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.944367;DP=3157;DP4=1425,1620,16,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.17982e-18;MQSB=0.999641;RPB=0.999621;SGB=92.0965;VDB=0.449372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.4:1801496 chr04:001801496 0 W/1801496-1801496 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.982118;DP=3129;DP4=1352,1648,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.49138e-12;MQSB=0.994188;RPB=0.918824;SGB=80.3949;VDB=0.766323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.4:1802870 chr04:001802870 0 W/1802870-1802870 FN1744-S SNP C -> T AC=2;AN=188;BQB=0.964253;DP=2526;DP4=1034,1440,19,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.32637e-15;MQSB=0.606444;RPB=0.338383;SGB=-41.4749;VDB=0.446818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R548H|791|LOC_Os04g03950|protein_coding|CODING|LOC_Os04g03950.1|5|1) FN2621-S.SNP.4:1803345 chr04:001803345 0 W/1803345-1803345 FN2621-S SNP C -> G AC=1;AN=200;BQB=0.459999;DP=4373;DP4=2128,2018,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.49106e-18;MQSB=0.996225;RPB=0.256249;SGB=137.158;VDB=0.611296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q447H|791|LOC_Os04g03950|protein_coding|CODING|LOC_Os04g03950.1|3|1) FN1492-S.SNP.4:1807749 chr04:001807749 0 W/1807749-1807749 FN1492-S Single Base Substitution C-T INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2559-S.SNP.4:1808149 chr04:001808149 0 W/1808149-1808149 FN2559-S SNP G -> A AC=2;AN=198;BQB=0.999813;DP=4242;DP4=1778,2190,11,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.77204e-11;MQSB=0.812728;RPB=0.390717;SGB=76.1002;VDB=0.854934;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.4:1815338 chr04:001815338 0 W/1815338-1815338 FN-70 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g03980 flavin monooxygenase, putative, expressed SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN3843-S.SNP.4:1818809 chr04:001818809 0 W/1818809-1818809 FN3843-S SNP C -> G AC=2;AN=190;BQB=0.995835;DP=3086;DP4=1628,1333,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.66172e-14;MQSB=0.987294;RPB=0.744275;SGB=112.85;VDB=0.895774;EFF=INTERGENIC(MODIFIER||||||||||1) FN-9.SNP.4:1819311 chr04:001819311 0 W/1819311-1819311 FN-9 Single Base Substitution C-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN3394-S.SNP.4:1826315 chr04:001826315 0 W/1826315-1826315 FN3394-S SNP G -> A AC=2;AN=184;BQB=0.840465;DP=2721;DP4=1296,1312,14,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.15617e-11;MQSB=0.999122;RPB=0.896216;SGB=98.4821;VDB=0.0611972;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.4:1829220 chr04:001829220 0 W/1829220-1829220 FN1046-S Single Base Substitution T-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN-314.SNP.4:1831211 chr04:001831211 0 W/1831211-1831211 FN-314 Single Base Substitution G-A INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN4141-S.SNP.4:1835981 chr04:001835981 0 W/1835981-1835981 FN4141-S SNP G -> A AC=1;AN=170;BQB=0.990968;DP=2487;DP4=995,1403,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.19536e-09;MQSB=0.993215;RPB=0.985602;SGB=56.7575;VDB=0.0225136;EFF=INTRON(MODIFIER||||298|LOC_Os04g03990|protein_coding|CODING|LOC_Os04g03990.1|6|1) FN1634-S.SNP.4:1836036 chr04:001836036 0 W/1836036-1836036 FN1634-S Single Base Substitution T-A INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2661-S.SNP.4:1836432 chr04:001836432 0 W/1836432-1836432 FN2661-S SNP T -> C AC=2;AN=200;BQB=0.92814;DP=3842;DP4=1504,2115,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.44318e-22;MQSB=0.993427;RPB=0.788747;SGB=43.1985;VDB=0.300129;EFF=INTRON(MODIFIER||||298|LOC_Os04g03990|protein_coding|CODING|LOC_Os04g03990.1|6|1) FN1577-S.SNP.4:1836475 chr04:001836475 0 W/1836475-1836475 FN1577-S Single Base Substitution T-A INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3493-S.SNP.4:1842309 chr04:001842309 0 W/1842309-1842309 FN3493-S SNP T -> C AC=1;AN=184;BQB=0.990779;DP=2675;DP4=1308,1226,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94413e-08;MQSB=0.837623;RPB=0.587788;SGB=53.2642;VDB=0.699825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.4:1844226 chr04:001844226 0 W/1844226-1844226 FN1029-S Single Base Substitution C-G INTRON HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN929-S.SNP.4:1846109 chr04:001846109 0 W/1846109-1846109 FN929-S Single Base Substitution T-C INTRON HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2140-S.SNP.4:1849019 chr04:001849019 0 W/1849019-1849019 FN2140-S SNP G -> C AC=1;AN=168;BQB=0.0188124;DP=3559;DP4=1613,1896,9,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.59764e-10;MQSB=0.98446;RPB=0.53577;SGB=-186.896;VDB=0.51042;EFF=UTR_3_PRIME(MODIFIER||207||371|LOC_Os04g04010|protein_coding|CODING|LOC_Os04g04010.1|3|1) FN3393-S.SNP.4:1851742 chr04:001851742 0 W/1851742-1851742 FN3393-S SNP A -> T AC=1;AN=184;BQB=0.516176;DP=3351;DP4=1650,1526,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.32607e-08;MQSB=0.817539;RPB=0.430488;SGB=60.4004;VDB=0.572823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.4:1852027 chr04:001852027 0 W/1852027-1852027 FN2268-S SNP C -> T AC=2;AN=190;BQB=0.564874;DP=4890;DP4=2249,2258,19,43;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000408998;MQB=5.87275e-33;MQSB=0.000218728;RPB=0.771612;SGB=210.241;VDB=0.399855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.4:1857780 chr04:001857780 0 W/1857780-1857780 FN-279 Single Base Substitution A-G INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-15.SNP.4:1862129 chr04:001862129 0 W/1862129-1862129 FN-15 Single Base Substitution A-T INTRON Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN-258.SNP.4:1865781 chr04:001865781 0 W/1865781-1865781 FN-258 Single Base Substitution C-G INTERGENIC HOMO SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2197-S.SNP.4:1867474 chr04:001867474 0 W/1867474-1867474 FN2197-S SNP A -> T AC=1;AN=190;BQB=0.975255;DP=5005;DP4=2345,2368,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55592e-06;MQSB=0.942711;RPB=0.994041;SGB=49.0954;VDB=0.500538;EFF=INTRON(MODIFIER||||208|LOC_Os04g04030|protein_coding|CODING|LOC_Os04g04030.1|2|1) FN918-S.SNP.4:1875386 chr04:001875386 0 W/1875386-1875386 FN918-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2579-S.SNP.4:1880618 chr04:001880618 0 W/1880618-1880618 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.734013;DP=4289;DP4=2166,1921,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00841e-05;MQSB=0.951013;RPB=0.960011;SGB=43.7442;VDB=0.428916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.4:1884209 chr04:001884209 0 W/1884209-1884209 FN2126-S SNP A -> T AC=1;AN=168;BQB=0.98922;DP=3602;DP4=1714,1807,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.63246e-18;MQSB=0.938068;RPB=0.885599;SGB=63.5086;VDB=0.362707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I338F|506|LOC_Os04g04080|protein_coding|CODING|LOC_Os04g04080.1|3|1) FN2140-S.SNP.4:1896971 chr04:001896971 0 W/1896971-1896971 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.552396;DP=3774;DP4=1878,1845,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0063593;MQB=5.29631e-10;MQSB=0.988365;RPB=0.656104;SGB=72.4869;VDB=0.132605;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L1091F|1183|LOC_Os04g04120|protein_coding|CODING|LOC_Os04g04120.1|7|1) FN2140-S.SNP.4:1896972 chr04:001896972 0 W/1896972-1896972 FN2140-S SNP T -> A AC=1;AN=168;BQB=0.0297883;DP=3756;DP4=1861,1832,21,16;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00638978;MQB=2.67657e-06;MQSB=0.934386;RPB=0.219355;SGB=-380.011;VDB=0.122578;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E1090D|1183|LOC_Os04g04120|protein_coding|CODING|LOC_Os04g04120.1|7|1) FN3774-S.SNP.4:1897813 chr04:001897813 0 W/1897813-1897813 FN3774-S SNP T -> G AC=1;AN=190;BQB=0.887786;DP=2661;DP4=1412,1155,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21917e-09;MQSB=0.98762;RPB=0.872147;SGB=85.5263;VDB=0.0701411;EFF=INTRON(MODIFIER||||1183|LOC_Os04g04120|protein_coding|CODING|LOC_Os04g04120.1|5|1) FN-285.SNP.4:1898942 chr04:001898942 0 W/1898942-1898942 FN-285 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-285.SNP.4:1898943 chr04:001898943 0 W/1898943-1898943 FN-285 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g04120 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-380.SNP.4:1900901 chr04:001900901 0 W/1900901-1900901 FN-380 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g04120 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN601-S.SNP.4:1908905 chr04:001908905 0 W/1908905-1908905 FN601-S Single Base Substitution C-T INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3316-S.SNP.4:1920425 chr04:001920425 0 W/1920425-1920425 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.891624;DP=3520;DP4=1428,1981,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0102273;MQB=0.000233475;MQSB=0.983562;RPB=0.917118;SGB=35.7479;VDB=0.801847;EFF=INTRON(MODIFIER||||1809|LOC_Os04g04150|protein_coding|CODING|LOC_Os04g04150.1|2|1) FN2415.SNP.4:1923194 chr04:001923194 0 W/1923194-1923194 FN2415 SNP C -> T AC=1;AN=200;BQB=0.661671;DP=4795;DP4=2210,2233,9,9;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.117831;MQB=0.019197;MQSB=0;RPB=0.819716;SGB=32.0901;VDB=0.83707;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q1190*|1809|LOC_Os04g04150|protein_coding|CODING|LOC_Os04g04150.1|3|1);LOF=(LOC_Os04g04150|LOC_Os04g04150|1|1.00);NMD=(LOC_Os04g04150|LOC_Os04g04150|1|1.00) FN2415.SNP.4:1923195 chr04:001923195 0 W/1923195-1923195 FN2415 SNP A -> C AC=1;AN=200;BQB=0.668575;DP=4800;DP4=2146,2210,10,7;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.117292;MQB=0.0736493;MQSB=0;RPB=0.758324;SGB=29.4849;VDB=0.257506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cCa|Q1190P|1809|LOC_Os04g04150|protein_coding|CODING|LOC_Os04g04150.1|3|1) FN429-S.SNP.4:1926561 chr04:001926561 0 W/1926561-1926561 FN429-S Single Base Substitution C-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN419-S.SNP.4:1927114 chr04:001927114 0 W/1927114-1927114 FN419-S Single Base Substitution C-G INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN987-S.SNP.4:1931176 chr04:001931176 0 W/1931176-1931176 FN987-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g04160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2436.SNP.4:1931363 chr04:001931363 0 W/1931363-1931363 FN2436 SNP T -> A AC=1;AN=200;BQB=0.542042;DP=4882;DP4=2288,2322,18,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0376895;MQB=0.00026975;MQSB=2.59406e-11;RPB=0.718047;SGB=63.3521;VDB=0.91809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K1291N|1666|LOC_Os04g04160|protein_coding|CODING|LOC_Os04g04160.1|4|1) FN1751-S.SNP.4:1935744 chr04:001935744 0 W/1935744-1935744 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.0723104;DP=4626;DP4=2471,2112,15,17;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0246433;MQB=0.00168732;MQSB=9.96736e-06;RPB=0.490652;SGB=-188.997;VDB=0.236578;EFF=INTRON(MODIFIER||||1666|LOC_Os04g04160|protein_coding|CODING|LOC_Os04g04160.1|2|1) FN2249-S.SNP.4:1936500 chr04:001936500 0 W/1936500-1936500 FN2249-S SNP T -> C AC=1;AN=190;BQB=0.242012;DP=5710;DP4=3161,2186,8,23;HOB=5.54017e-05;ICB=0.000111386;MQ=13;MQ0F=0.557443;MQB=0.00258621;MQSB=0;RPB=0.397888;SGB=28.9731;VDB=0.924509;EFF=INTRON(MODIFIER||||1666|LOC_Os04g04160|protein_coding|CODING|LOC_Os04g04160.1|2|1) FN1721-S.SNP.4:1938709 chr04:001938709 0 W/1938709-1938709 FN1721-S SNP G -> A AC=1;AN=188;BQB=0.599193;DP=1569;DP4=833,686,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=23;MQ0F=0.325048;MQB=0.532007;MQSB=0;RPB=0.710966;SGB=39.8925;VDB=0.078521;EFF=INTRON(MODIFIER||||1666|LOC_Os04g04160|protein_coding|CODING|LOC_Os04g04160.1|1|1) FN1456-S.SNP.4:1941558 chr04:001941558 0 W/1941558-1941558 FN1456-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2242-S.SNP.4:1944452 chr04:001944452 0 W/1944452-1944452 FN2242-S SNP T -> C AC=1;AN=190;BQB=0.904273;DP=5121;DP4=2425,2282,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0576059;MQB=0.520558;MQSB=2.20042e-09;RPB=0.691516;SGB=32.5467;VDB=0.653752;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E728|1007|LOC_Os04g04180|protein_coding|CODING|LOC_Os04g04180.1|5|1) FN3613-S.SNP.4:1951114 chr04:001951114 0 W/1951114-1951114 FN3613-S SNP T -> C AC=1;AN=190;BQB=0.969675;DP=2704;DP4=1390,1182,9,23;HOB=5.54017e-05;ICB=0.000111386;MQ=13;MQ0F=0.382396;MQB=0.0276639;MQSB=0;RPB=0.459411;SGB=30.527;VDB=0.212032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L408P|929|LOC_Os04g04190|protein_coding|CODING|LOC_Os04g04190.1|2|1) FN2597-S.SNP.4:1955081 chr04:001955081 0 W/1955081-1955081 FN2597-S SNP T -> C AC=1;AN=196;BQB=0.0475119;DP=4217;DP4=1969,1918,10,11;HOB=5.20616e-05;ICB=0.000104654;MQ=38;MQ0F=0.0282191;MQB=0.437166;MQSB=1.82339e-26;RPB=0.607125;SGB=65.3149;VDB=0.872132;EFF=INTRON(MODIFIER||||986|LOC_Os04g04200|protein_coding|CODING|LOC_Os04g04200.1|1|1) FN2463.SNP.4:1956318 chr04:001956318 0 W/1956318-1956318 FN2463 SNP G -> A AC=2;AN=200;BQB=0.910111;DP=3993;DP4=1891,1863,17,12;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0658653;MQB=0.857367;MQSB=3.25254e-08;RPB=0.361868;SGB=127.947;VDB=0.612567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E348K|986|LOC_Os04g04200|protein_coding|CODING|LOC_Os04g04200.1|3|1) FN2327.SNP.4:1967753 chr04:001967753 0 W/1967753-1967753 FN2327 SNP G -> A AC=1;AN=192;BQB=0.857125;DP=4440;DP4=1939,1940,17,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000225225;MQB=5.15407e-11;MQSB=0.0586405;RPB=0.278921;SGB=89.6809;VDB=0.239499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A185V|297|LOC_Os04g04220|protein_coding|CODING|LOC_Os04g04220.1|2|1) FN1703-S.SNP.4:1971643 chr04:001971643 0 W/1971643-1971643 FN1703-S SNP C -> T AC=2;AN=188;BQB=0.329512;DP=2209;DP4=1164,956,15,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.01084e-08;MQSB=0.971984;RPB=0.376358;SGB=-37.8212;VDB=0.577706;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D164|173|LOC_Os04g04230|protein_coding|CODING|LOC_Os04g04230.1|1|1) FN1703-S.SNP.4:1971646 chr04:001971646 0 W/1971646-1971646 FN1703-S SNP C -> G AC=2;AN=188;BQB=0.704314;DP=2254;DP4=1190,988,14,3;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.1997e-10;MQSB=0.962805;RPB=0.673018;SGB=50.1574;VDB=0.351899;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A165|173|LOC_Os04g04230|protein_coding|CODING|LOC_Os04g04230.1|1|1) FN1703-S.SNP.4:1971650 chr04:001971650 0 W/1971650-1971650 FN1703-S SNP A -> G AC=2;AN=188;BQB=0.823456;DP=2275;DP4=1151,1032,18,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.98252e-08;MQSB=0.975977;RPB=0.714083;SGB=-64.8159;VDB=0.428433;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K167E|173|LOC_Os04g04230|protein_coding|CODING|LOC_Os04g04230.1|1|1) FN504-S.SNP.4:1972142 chr04:001972142 0 W/1972142-1972142 FN504-S Single Base Substitution T-G INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1636-S.SNP.4:1973077 chr04:001973077 0 W/1973077-1973077 FN1636-S Single Base Substitution T-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1674-S.SNP.4:1973077 chr04:001973077 0 W/1973077-1973077 FN1674-S SNP T -> A AC=2;AN=188;BQB=0.000615335;DP=3468;DP4=1627,1740,15,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.43281e-06;MQSB=0.80372;RPB=0.446146;SGB=-429.138;VDB=0.0151821;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.4:1981783 chr04:001981783 0 W/1981783-1981783 FN943-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g04240 sterol 3-beta-glucosyltransferase, putative, expressed SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN-221.SNP.4:1990173 chr04:001990173 0 W/1990173-1990173 FN-221 Single Base Substitution A-G INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3572-S.SNP.4:2000188 chr04:002000188 0 W/2000188-2000188 FN3572-S SNP G -> A AC=2;AN=188;BQB=0.535697;DP=5614;DP4=2752,2742,28,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.32665e-27;MQSB=0.914867;RPB=0.188612;SGB=244.341;VDB=0.988802;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T156|900|LOC_Os04g04270|protein_coding|CODING|LOC_Os04g04270.1|2|1) FN4122-S.SNP.4:2000811 chr04:002000811 0 W/2000811-2000811 FN4122-S SNP C -> T AC=1;AN=182;BQB=0.896814;DP=2643;DP4=1219,1286,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.7378e-07;MQSB=0.615277;RPB=0.627108;SGB=44.1115;VDB=0.162735;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A317|900|LOC_Os04g04270|protein_coding|CODING|LOC_Os04g04270.1|3|1) FN3430-S.SNP.4:2001862 chr04:002001862 0 W/2001862-2001862 FN3430-S SNP G -> T AC=2;AN=184;BQB=0.766486;DP=4002;DP4=1960,1919,23,28;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.74452e-24;MQSB=0.790177;RPB=0.992692;SGB=169.576;VDB=0.745312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R503L|900|LOC_Os04g04270|protein_coding|CODING|LOC_Os04g04270.1|5|1) FN3720-S.SNP.4:2004492 chr04:002004492 0 W/2004492-2004492 FN3720-S SNP A -> G AC=2;AN=190;BQB=0.65981;DP=2884;DP4=1383,1362,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.68946e-08;MQSB=0.997824;RPB=0.422829;SGB=60.9777;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.4:2007049 chr04:002007049 0 W/2007049-2007049 FN1124-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g04290 retrotransposon protein, putative, unclassified, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN-228.SNP.4:2007181 chr04:002007181 0 W/2007181-2007181 FN-228 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g04290 retrotransposon protein, putative, unclassified, expressed SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1135-S.SNP.4:2009016 chr04:002009016 0 W/2009016-2009016 FN1135-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g04290 retrotransposon protein, putative, unclassified, expressed SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3421-S.SNP.4:2013333 chr04:002013333 0 W/2013333-2013333 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.997944;DP=3795;DP4=1940,1779,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.74675e-10;MQSB=0.969491;RPB=0.98127;SGB=53.3568;VDB=0.497859;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.4:2032839 chr04:002032839 0 W/2032839-2032839 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN_N1-150-1.SNP.4:2033769 chr04:002033769 0 W/2033769-2033769 FN_N1-150-1 Single Base Substitution A-G Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN_789-3-1.SNP.4:2036058 chr04:002036058 0 W/2036058-2036058 FN_789-3-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os04g04330 receptor-like protein kinase 2 precursor, putative, expressed SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN504-S.SNP.4:2036185 chr04:002036185 0 W/2036185-2036185 FN504-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN239-S.SNP.4:2039521 chr04:002039521 0 W/2039521-2039521 FN239-S Single Base Substitution G-A INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN-392.SNP.4:2043078 chr04:002043078 0 W/2043078-2043078 FN-392 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN1114-S.SNP.4:2047128 chr04:002047128 0 W/2047128-2047128 FN1114-S Single Base Substitution T-A INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3437-S.SNP.4:2047803 chr04:002047803 0 W/2047803-2047803 FN3437-S SNP G -> A AC=2;AN=184;BQB=0.999324;DP=2399;DP4=1082,1182,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.82425e-10;MQSB=0.999292;RPB=0.549497;SGB=66.8296;VDB=0.500904;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.4:2056721 chr04:002056721 0 W/2056721-2056721 FN-93 Single Base Substitution G-A INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3713-S.SNP.4:2063944 chr04:002063944 0 W/2063944-2063944 FN3713-S SNP G -> T AC=1;AN=190;BQB=0.974294;DP=2677;DP4=1418,1152,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0104595;MQB=0.195549;MQSB=0.619412;RPB=0.997528;SGB=67.3108;VDB=0.988787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.4:2065588 chr04:002065588 0 W/2065588-2065588 FN2338 SNP T -> C AC=1;AN=192;BQB=0.679397;DP=4808;DP4=2285,2175,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.00707155;MQB=0.29037;MQSB=0;RPB=0.7578;SGB=10.4835;VDB=0.0288684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.4:2068377 chr04:002068377 0 W/2068377-2068377 FN1497-S Single Base Substitution G-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1346-S.SNP.4:2069070 chr04:002069070 0 W/2069070-2069070 FN1346-S Single Base Substitution A-G INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2253-S.SNP.4:2082077 chr04:002082077 0 W/2082077-2082077 FN2253-S SNP C -> A AC=2;AN=190;BQB=0.282381;DP=3695;DP4=1443,2028,5,6;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.00568336;MQB=0.396594;MQSB=0.662726;RPB=0.564322;SGB=13.4442;VDB=0.354229;EFF=INTRON(MODIFIER||||1724|LOC_Os04g04390|protein_coding|CODING|LOC_Os04g04390.1|1|1) FN1521-S.SNP.4:2085039 chr04:002085039 0 W/2085039-2085039 FN1521-S Single Base Substitution C-G INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2308.SNP.4:2085649 chr04:002085649 0 W/2085649-2085649 FN2308 SNP C -> G AC=2;AN=192;BQB=0.678078;DP=4721;DP4=2255,2153,16,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.16128e-22;MQSB=0.756937;RPB=0.928325;SGB=46.4635;VDB=0.737829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.4:2099783 chr04:002099783 0 W/2099783-2099783 FN1438-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN509-S.SNP.4:2101959 chr04:002101959 0 W/2101959-2101959 FN509-S Single Base Substitution G-A INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN276-S.SNP.4:2105767 chr04:002105767 0 W/2105767-2105767 FN276-S Single Base Substitution G-A INTRON HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN862-S.SNP.4:2108611 chr04:002108611 0 W/2108611-2108611 FN862-S Single Base Substitution G-A INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN1239-S.SNP.4:2110223 chr04:002110223 0 W/2110223-2110223 FN1239-S Single Base Substitution C-T INTRON HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN468-S.SNP.4:2114662 chr04:002114662 0 W/2114662-2114662 FN468-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-156.SNP.4:2115019 chr04:002115019 0 W/2115019-2115019 FN-156 Single Base Substitution G-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-120.SNP.4:2121252 chr04:002121252 0 W/2121252-2121252 FN-120 Single Base Substitution T-A INTRON HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2408.SNP.4:2122870 chr04:002122870 0 W/2122870-2122870 FN2408 SNP G -> A AC=1;AN=200;BQB=0.323066;DP=4866;DP4=2273,2309,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36982e-09;MQSB=0.997302;RPB=0.94506;SGB=40.2696;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.4:2124753 chr04:002124753 0 W/2124753-2124753 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.699338;DP=3005;DP4=1112,1783,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000533691;MQSB=0.960112;RPB=0.995924;SGB=35.4339;VDB=0.76064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P14S|189|LOC_Os04g04470|protein_coding|CODING|LOC_Os04g04470.1|1|1) FN1519-S.SNP.4:2125664 chr04:002125664 0 W/2125664-2125664 FN1519-S Single Base Substitution T-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1685-S.SNP.4:2125955 chr04:002125955 0 W/2125955-2125955 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.916064;DP=2778;DP4=1193,1550,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.54825e-08;MQSB=0.973135;RPB=0.882858;SGB=2.45162;VDB=0.656766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.4:2128677 chr04:002128677 0 W/2128677-2128677 FN2444 SNP A -> T AC=2;AN=200;BQB=0.995782;DP=5030;DP4=2426,2277,29,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01317e-31;MQSB=0.305722;RPB=0.945809;SGB=216.923;VDB=0.780032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.4:2134561 chr04:002134561 0 W/2134561-2134561 FN1461-S Single Base Substitution C-T INTRON HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN3944-S.SNP.4:2138074 chr04:002138074 0 W/2138074-2138074 FN3944-S SNP G -> A AC=2;AN=168;BQB=0.672232;DP=1028;DP4=147,806,2,11;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0077821;MQB=0.20622;MQSB=1.89634e-05;RPB=0.919634;SGB=34.748;VDB=0.0398674;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.4:2139362 chr04:002139362 0 W/2139362-2139362 FN580-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g04490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3698-S.SNP.4:2141411 chr04:002141411 0 W/2141411-2141411 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.885988;DP=2289;DP4=1000,1187,8,7;HOB=0.020831;ICB=0.494793;MQ=24;MQ0F=0.19135;MQB=0.862079;MQSB=0.308478;RPB=0.864748;SGB=62.7569;VDB=0.965071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P878S|1466|LOC_Os04g04490|protein_coding|CODING|LOC_Os04g04490.1|3|1) FN3997-S.SNP.4:2141411 chr04:002141411 0 W/2141411-2141411 FN3997-S SNP G -> A AC=1;AN=168;BQB=0.878018;DP=2227;DP4=1000,1124,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.207454;MQB=0.895144;MQSB=0.0450946;RPB=0.860363;SGB=65.4653;VDB=0.654918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P878S|1466|LOC_Os04g04490|protein_coding|CODING|LOC_Os04g04490.1|3|1) FN467-S.SNP.4:2141411 chr04:002141411 0 W/2141411-2141411 FN467-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g04490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.4:2141411 chr04:002141411 0 W/2141411-2141411 FN871-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g04490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_827-1.SNP.4:2141664 chr04:002141664 0 W/2141664-2141664 FN_827-1 Single Base Substitution C-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2795-S.SNP.4:2146823 chr04:002146823 0 W/2146823-2146823 FN2795-S SNP G -> A AC=1;AN=192;BQB=0.947313;DP=2868;DP4=873,1840,1,9;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0108089;MQB=0.999991;MQSB=1.47136e-43;RPB=0.699163;SGB=25.7687;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.4:2150088 chr04:002150088 0 W/2150088-2150088 FN1255-S Single Base Substitution A-T INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2175-S.SNP.4:2151997 chr04:002151997 0 W/2151997-2151997 FN2175-S SNP A -> G AC=2;AN=168;BQB=0.0229779;DP=3791;DP4=1736,2007,12,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.4576e-15;MQSB=0.788587;RPB=0.664664;SGB=-6.32537;VDB=0.508624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.4:2155663 chr04:002155663 0 W/2155663-2155663 FN1258-S Single Base Substitution C-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2619-S.SNP.4:2156697 chr04:002156697 0 W/2156697-2156697 FN2619-S SNP T -> C AC=1;AN=188;BQB=0.77651;DP=3632;DP4=1647,1516,19,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00110132;MQB=6.34522e-07;MQSB=1.8798e-09;RPB=0.076615;SGB=97.671;VDB=0.0810476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.4:2160802 chr04:002160802 0 W/2160802-2160802 FN3701-S SNP A -> G AC=1;AN=190;BQB=0.822018;DP=2821;DP4=1360,1295,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95961e-12;MQSB=0.999999;RPB=0.83415;SGB=57.4238;VDB=0.52849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y129H|920|LOC_Os04g04510|protein_coding|CODING|LOC_Os04g04510.1|1|1) FN1280-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN1280-S Single Base Substitution G-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2544-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN2544-S SNP G -> T AC=2;AN=190;BQB=0.973823;DP=3773;DP4=1769,1728,14,17;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.209647;MQB=0.978957;MQSB=0;RPB=0.914139;SGB=65.676;VDB=0.76665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN3434-S SNP G -> T AC=2;AN=184;BQB=0.554361;DP=2788;DP4=1485,1210,10,16;HOB=0.0215028;ICB=0.494625;MQ=27;MQ0F=0.242109;MQB=0.380264;MQSB=0;RPB=0.997135;SGB=51.0148;VDB=0.92372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN3729-S SNP G -> T AC=1;AN=190;BQB=0.710574;DP=2673;DP4=1422,1131,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.246539;MQB=0.867675;MQSB=0;RPB=0.832386;SGB=71.6393;VDB=0.277567;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN4094-S SNP G -> T AC=1;AN=182;BQB=0.744603;DP=2977;DP4=1574,1327,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=27;MQ0F=0.247901;MQB=0.985462;MQSB=0;RPB=0.200276;SGB=35.6277;VDB=0.468572;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.4:2163939 chr04:002163939 0 W/2163939-2163939 FN498-S Single Base Substitution G-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1415-S.SNP.4:2166301 chr04:002166301 0 W/2166301-2166301 FN1415-S Single Base Substitution A-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2347.SNP.4:2180317 chr04:002180317 0 W/2180317-2180317 FN2347 SNP T -> A AC=2;AN=192;BQB=0.175105;DP=4595;DP4=2049,2113,20,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.72598e-25;MQSB=0.189809;RPB=0.978223;SGB=213.527;VDB=0.277529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E240V|263|LOC_Os04g04560|protein_coding|CODING|LOC_Os04g04560.1|1|1) FN1330-S.SNP.4:2180997 chr04:002180997 0 W/2180997-2180997 FN1330-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g04560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3568-S.SNP.4:2185886 chr04:002185886 0 W/2185886-2185886 FN3568-S SNP G -> A AC=1;AN=188;BQB=0.27825;DP=3134;DP4=1163,1918,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.66791e-06;MQSB=0.863156;RPB=0.981271;SGB=53.5223;VDB=0.612432;EFF=INTRON(MODIFIER||||747|LOC_Os04g04574|protein_coding|CODING|LOC_Os04g04574.1|2|1) FN1640-S.SNP.4:2186814 chr04:002186814 0 W/2186814-2186814 FN1640-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os04g04574 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN4176-S.SNP.4:2187003 chr04:002187003 0 W/2187003-2187003 FN4176-S SNP A -> T AC=1;AN=170;BQB=0.562034;DP=3441;DP4=1438,1799,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0389422;MQB=0.0400217;MQSB=6.41197e-10;RPB=0.936056;SGB=38.3207;VDB=0.874637;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P572|747|LOC_Os04g04574|protein_coding|CODING|LOC_Os04g04574.1|3|1) FN2385.SNP.4:2189412 chr04:002189412 0 W/2189412-2189412 FN2385 SNP G -> C AC=1;AN=192;BQB=0.966055;DP=5289;DP4=2377,2661,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00775194;MQB=1.5366e-06;MQSB=0.109766;RPB=0.846291;SGB=49.4287;VDB=0.82979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.4:2190161 chr04:002190161 0 W/2190161-2190161 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.964681;DP=5067;DP4=2161,2721,14,15;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0969015;MQB=0.47355;MQSB=1.62679e-07;RPB=0.999955;SGB=25.0638;VDB=0.129633;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.4:2195006 chr04:002195006 0 W/2195006-2195006 FN626-S Single Base Substitution A-G INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN75-S-S.SNP.4:2198021 chr04:002198021 0 W/2198021-2198021 FN75-S-S SNP G -> A AC=1;AN=190;BQB=0.654482;DP=4559;DP4=2066,2163,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00592235;MQB=3.56252e-06;MQSB=0.59018;RPB=0.99494;SGB=21.2038;VDB=0.60167;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.4:2201666 chr04:002201666 0 W/2201666-2201666 FN4247-S SNP T -> G AC=1;AN=170;BQB=0.993123;DP=2471;DP4=1467,927,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0424929;MQB=0.00105579;MQSB=0.370073;RPB=0.988045;SGB=61.2001;VDB=0.0742273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K49T|152|LOC_Os04g04600|protein_coding|CODING|LOC_Os04g04600.1|2|1) FN2357.SNP.4:2203218 chr04:002203218 0 W/2203218-2203218 FN2357 SNP G -> A AC=1;AN=192;BQB=0.547234;DP=4309;DP4=1811,2229,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0696217;MQB=0.805613;MQSB=1.42092e-42;RPB=0.999949;SGB=64.7304;VDB=0.45487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.4:2205075 chr04:002205075 0 W/2205075-2205075 FN2213-S SNP A -> G AC=1;AN=190;BQB=0.841973;DP=4965;DP4=2206,2503,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00120846;MQB=0.209009;MQSB=0.668941;RPB=0.381125;SGB=58.2031;VDB=0.637461;EFF=INTRON(MODIFIER||||135|LOC_Os04g04610|protein_coding|CODING|LOC_Os04g04610.1|1|1) FN3477-S.SNP.4:2210177 chr04:002210177 0 W/2210177-2210177 FN3477-S SNP T -> C AC=1;AN=184;BQB=0.723605;DP=2965;DP4=1420,1456,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00134907;MQB=1.13427e-08;MQSB=0.0585328;RPB=0.519781;SGB=63.9222;VDB=0.968118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.4:2210610 chr04:002210610 0 W/2210610-2210610 FN3705-S SNP C -> A AC=1;AN=190;BQB=0.877203;DP=2189;DP4=850,1141,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000374348;MQSB=0.00240667;RPB=0.792984;SGB=49.0954;VDB=0.470998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.4:2211002 chr04:002211002 0 W/2211002-2211002 FN1280-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2544-S.SNP.4:2211002 chr04:002211002 0 W/2211002-2211002 FN2544-S SNP G -> A AC=2;AN=198;BQB=0.967539;DP=1481;DP4=1102,257,9,1;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.53195e-05;MQSB=0.00906036;RPB=0.845951;SGB=40.3588;VDB=0.687581;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.4:2211002 chr04:002211002 0 W/2211002-2211002 FN3434-S SNP G -> A AC=2;AN=184;BQB=0.973457;DP=1276;DP4=951,211,11,3;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=7.53795e-07;MQSB=0.999823;RPB=0.81064;SGB=57.786;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.4:2211002 chr04:002211002 0 W/2211002-2211002 FN498-S Single Base Substitution G-A INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2163-S.SNP.4:2211383 chr04:002211383 0 W/2211383-2211383 FN2163-S SNP A -> G AC=1;AN=168;BQB=0.226472;DP=1541;DP4=1143,303,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000101086;MQSB=0.71757;RPB=0.869276;SGB=-57.0838;VDB=0.413935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.4:2214545 chr04:002214545 0 W/2214545-2214545 FN1638-S Single Base Substitution C-T INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3863-S.SNP.4:2222378 chr04:002222378 0 W/2222378-2222378 FN3863-S SNP T -> C AC=1;AN=158;BQB=0.988897;DP=2394;DP4=1006,1294,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.91484e-05;MQSB=0.827595;RPB=0.927165;SGB=23.9652;VDB=0.332598;EFF=INTRON(MODIFIER||||237|LOC_Os04g04640|protein_coding|CODING|LOC_Os04g04640.1|6|1) FN473-S.SNP.4:2222583 chr04:002222583 0 W/2222583-2222583 FN473-S Single Base Substitution A-G INTRON HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN2351.SNP.4:2225762 chr04:002225762 0 W/2225762-2225762 FN2351 SNP A -> G AC=1;AN=192;BQB=0.507768;DP=5074;DP4=2531,2356,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.05294e-07;MQSB=0.977266;RPB=0.586387;SGB=28.9139;VDB=0.83796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y212H|237|LOC_Os04g04640|protein_coding|CODING|LOC_Os04g04640.1|6|1) FN1288-S.SNP.4:2229576 chr04:002229576 0 W/2229576-2229576 FN1288-S Single Base Substitution A-T INTRON HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1571-S.SNP.4:2245520 chr04:002245520 0 W/2245520-2245520 FN1571-S Single Base Substitution G-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1416-S.SNP.4:2246198 chr04:002246198 0 W/2246198-2246198 FN1416-S Single Base Substitution C-A INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1072-S.SNP.4:2249647 chr04:002249647 0 W/2249647-2249647 FN1072-S Single Base Substitution G-A INTRON HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1423-S.SNP.4:2251212 chr04:002251212 0 W/2251212-2251212 FN1423-S Single Base Substitution G-T INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3835-S.SNP.4:2251679 chr04:002251679 0 W/2251679-2251679 FN3835-S SNP C -> T AC=2;AN=190;BQB=0.950796;DP=3058;DP4=1375,1565,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.66923e-13;MQSB=0.815096;RPB=0.998349;SGB=85.5263;VDB=0.858451;EFF=INTRON(MODIFIER||||419|LOC_Os04g04670|protein_coding|CODING|LOC_Os04g04670.1|1|1) FN1430-S.SNP.4:2252664 chr04:002252664 0 W/2252664-2252664 FN1430-S Single Base Substitution A-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1330-S.SNP.4:2263648 chr04:002263648 0 W/2263648-2263648 FN1330-S Single Base Substitution C-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3710-S.SNP.4:2264621 chr04:002264621 0 W/2264621-2264621 FN3710-S SNP A -> T AC=2;AN=190;BQB=0.999559;DP=2840;DP4=1348,1366,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.88961e-17;MQSB=0.832692;RPB=0.961113;SGB=85.8548;VDB=0.00725911;EFF=INTERGENIC(MODIFIER||||||||||1) FN797-S.SNP.4:2266743 chr04:002266743 0 W/2266743-2266743 FN797-S Single Base Substitution C-G INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3507-S.SNP.4:2269242 chr04:002269242 0 W/2269242-2269242 FN3507-S SNP G -> A AC=1;AN=188;BQB=0.999888;DP=3674;DP4=1490,2089,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00517148;MQB=0.283112;MQSB=0.143573;RPB=0.867795;SGB=48.9658;VDB=0.287128;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G690D|1543|LOC_Os04g04720|protein_coding|CODING|LOC_Os04g04720.1|2|1) FN1651-S.SNP.4:2269511 chr04:002269511 0 W/2269511-2269511 FN1651-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g04720 retrotransposon protein, putative, unclassified, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3629-S.SNP.4:2276491 chr04:002276491 0 W/2276491-2276491 FN3629-S SNP G -> A AC=1;AN=190;BQB=0.825437;DP=1920;DP4=892,921,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41141e-08;MQSB=0.99679;RPB=0.604016;SGB=58.2031;VDB=0.475431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.4:2279324 chr04:002279324 0 W/2279324-2279324 FN2173-S SNP G -> A AC=2;AN=168;BQB=0.163605;DP=2141;DP4=878,1194,18,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.81403e-11;MQSB=0.903259;RPB=0.993831;SGB=48.9237;VDB=0.308015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G43R|123|LOC_Os04g04740|protein_coding|CODING|LOC_Os04g04740.1|1|1) FN2408.SNP.4:2281407 chr04:002281407 0 W/2281407-2281407 FN2408 SNP T -> A AC=1;AN=200;BQB=0.754245;DP=4761;DP4=2335,2134,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.81105e-09;MQSB=0.980404;RPB=0.37043;SGB=7.88476;VDB=0.212576;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.4:2286021 chr04:002286021 0 W/2286021-2286021 FN-409 Single Base Substitution C-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1206-S.SNP.4:2289633 chr04:002289633 0 W/2289633-2289633 FN1206-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN969-S.SNP.4:2292276 chr04:002292276 0 W/2292276-2292276 FN969-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2696-S.SNP.4:2292357 chr04:002292357 0 W/2292357-2292357 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.83967;DP=5550;DP4=1978,3242,8,6;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0868468;MQB=0.823393;MQSB=0;RPB=0.856225;SGB=40.2696;VDB=0.850759;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G100|275|LOC_Os04g04770|protein_coding|CODING|LOC_Os04g04770.1|1|1) FN1758-S.SNP.4:2302682 chr04:002302682 0 W/2302682-2302682 FN1758-S SNP T -> G AC=1;AN=188;BQB=0.197045;DP=3054;DP4=1792,1229,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0520629;MQB=0.0135933;MQSB=0.0419799;RPB=0.483287;SGB=19.4279;VDB=0.0343337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aGt|I331S|339|LOC_Os04g04800|protein_coding|CODING|LOC_Os04g04800.1|2|1) FN442-S.SNP.4:2304854 chr04:002304854 0 W/2304854-2304854 FN442-S Single Base Substitution G-A INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN3455-S.SNP.4:2305216 chr04:002305216 0 W/2305216-2305216 FN3455-S SNP T -> A AC=1;AN=184;BQB=0.952162;DP=2856;DP4=1344,1407,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00035014;MQB=5.21983e-06;MQSB=0.996236;RPB=0.137267;SGB=44.2207;VDB=0.0500111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.4:2308388 chr04:002308388 0 W/2308388-2308388 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.984596;DP=2770;DP4=1466,1234,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.39053e-07;MQSB=0.997931;RPB=0.864065;SGB=13.1007;VDB=0.204138;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.4:2308389 chr04:002308389 0 W/2308389-2308389 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.150482;DP=2757;DP4=1446,1226,8,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.62294e-07;MQSB=0.995588;RPB=0.801059;SGB=25.0952;VDB=0.324775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.4:2309489 chr04:002309489 0 W/2309489-2309489 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.879759;DP=4750;DP4=2283,2173,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.17677e-10;MQSB=0.945722;RPB=0.127247;SGB=81.8956;VDB=0.507369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.4:2311966 chr04:002311966 0 W/2311966-2311966 FN2461 SNP G -> A AC=1;AN=200;BQB=0.834904;DP=4793;DP4=2485,2028,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2635e-05;MQSB=0.705888;RPB=0.131689;SGB=33.0593;VDB=0.15006;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.4:2314837 chr04:002314837 0 W/2314837-2314837 FN883-S Single Base Substitution A-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN4082-S.SNP.4:2314970 chr04:002314970 0 W/2314970-2314970 FN4082-S SNP G -> T AC=1;AN=182;BQB=0.994254;DP=2900;DP4=1450,1360,8,16;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.177931;MQB=0.126357;MQSB=0.000496443;RPB=0.99666;SGB=74.2472;VDB=0.2714;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.4:2322948 chr04:002322948 0 W/2322948-2322948 FN4224-S SNP C -> G AC=2;AN=170;BQB=0.731309;DP=2377;DP4=1410,880,13,6;HOB=0.0232526;ICB=0.494188;MQ=24;MQ0F=0.374842;MQB=0.511736;MQSB=0;RPB=0.150234;SGB=78.9707;VDB=0.043358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.4:2327588 chr04:002327588 0 W/2327588-2327588 FN1572-S Single Base Substitution G-C INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3823-S.SNP.4:2330110 chr04:002330110 0 W/2330110-2330110 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.6138;DP=2938;DP4=1318,1538,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0190606;MQB=0.863379;MQSB=0.365783;RPB=0.827443;SGB=35.4339;VDB=0.371445;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.4:2342348 chr04:002342348 0 W/2342348-2342348 FN4065-S SNP C -> T AC=1;AN=168;BQB=0.943827;DP=2706;DP4=1409,1162,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.247228;MQB=0.992589;MQSB=0;RPB=0.978003;SGB=39.2004;VDB=0.432841;EFF=INTRON(MODIFIER||||501|LOC_Os04g04860|protein_coding|CODING|LOC_Os04g04860.1|1|1) FN1212-S.SNP.4:2348137 chr04:002348137 0 W/2348137-2348137 FN1212-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1623-S.SNP.4:2352407 chr04:002352407 0 W/2352407-2352407 FN1623-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN670-S.SNP.4:2352630 chr04:002352630 0 W/2352630-2352630 FN670-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3064-S.SNP.4:2358725 chr04:002358725 0 W/2358725-2358725 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.997925;DP=5848;DP4=2802,2896,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000170999;MQB=1.02917e-10;MQSB=0.224857;RPB=0.623639;SGB=53.3568;VDB=0.633754;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q76|266|LOC_Os04g04890|protein_coding|CODING|LOC_Os04g04890.1|1|1) FN1367-S.SNP.4:2359814 chr04:002359814 0 W/2359814-2359814 FN1367-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN-371.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN-371 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1068-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN1068-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN260-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN260-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN282-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN282-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3311-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN3311-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3436-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN3436-S SNP C -> A AC=1;AN=184;BQB=0.950218;DP=6411;DP4=3106,3087,19,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00218375;MQB=1.10727e-15;MQSB=0.0516464;RPB=0.642508;SGB=143.7;VDB=0.38741;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R774|1374|LOC_Os04g04900|protein_coding|CODING|LOC_Os04g04900.1|1|1) FN3528-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.994065;DP=6094;DP4=2957,2969,25,21;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00246144;MQB=4.66401e-21;MQSB=0.0949355;RPB=0.421434;SGB=203.451;VDB=0.102557;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R774|1374|LOC_Os04g04900|protein_coding|CODING|LOC_Os04g04900.1|1|1) FN4098-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN4098-S SNP C -> A AC=1;AN=182;BQB=0.999444;DP=6657;DP4=3227,3264,17,24;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.0025537;MQB=4.54507e-19;MQSB=0.272962;RPB=0.947606;SGB=88.4264;VDB=0.641099;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R774|1374|LOC_Os04g04900|protein_coding|CODING|LOC_Os04g04900.1|1|1) FN511-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN511-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN530-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN530-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN752-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN752-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN829-S.SNP.4:2361885 chr04:002361885 0 W/2361885-2361885 FN829-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2373.SNP.4:2364352 chr04:002364352 0 W/2364352-2364352 FN2373 SNP G -> T AC=1;AN=192;BQB=0.00643785;DP=10835;DP4=4861,4748,19,24;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.00969082;MQB=0.0304616;MQSB=2.47794e-06;RPB=0.930971;SGB=0.468728;VDB=0.517551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.4:2372159 chr04:002372159 0 W/2372159-2372159 FN1617-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g04914 retrotransposon protein, putative, unclassified, expressed SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1276-S.SNP.4:2372976 chr04:002372976 0 W/2372976-2372976 FN1276-S Single Base Substitution G-A INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN4152-S.SNP.4:2373369 chr04:002373369 0 W/2373369-2373369 FN4152-S SNP C -> T AC=2;AN=170;BQB=0.941545;DP=2074;DP4=1080,884,25,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.24345e-18;MQSB=0.50754;RPB=0.000286387;SGB=153.629;VDB=0.0847901;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.4:2373815 chr04:002373815 0 W/2373815-2373815 FN1647-S Single Base Substitution G-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1647-S.SNP.4:2373816 chr04:002373816 0 W/2373816-2373816 FN1647-S Single Base Substitution C-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN-258.SNP.4:2374167 chr04:002374167 0 W/2374167-2374167 FN-258 Single Base Substitution G-A INTERGENIC HOMO SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2698-S.SNP.4:2374177 chr04:002374177 0 W/2374177-2374177 FN2698-S SNP G -> T AC=1;AN=200;BQB=0.953389;DP=4814;DP4=2330,2277,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.13161e-11;MQSB=0.996158;RPB=0.659748;SGB=11.0951;VDB=0.242626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.4:2375453 chr04:002375453 0 W/2375453-2375453 FN3815-S SNP A -> G AC=1;AN=190;BQB=0.783359;DP=3608;DP4=1811,1604,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.00012084;MQSB=0.89391;RPB=0.868142;SGB=25.439;VDB=0.705724;EFF=INTRON(MODIFIER||||766|LOC_Os04g04930|protein_coding|CODING|LOC_Os04g04930.1|2|1) FN3407-S.SNP.4:2375874 chr04:002375874 0 W/2375874-2375874 FN3407-S SNP G -> A AC=2;AN=184;BQB=0.954167;DP=4296;DP4=2205,2023,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.61697e-12;MQSB=0.836314;RPB=0.0440812;SGB=103.004;VDB=0.0987717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D206N|766|LOC_Os04g04930|protein_coding|CODING|LOC_Os04g04930.1|3|1) FN2704-S.SNP.4:2377529 chr04:002377529 0 W/2377529-2377529 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.0185788;DP=5044;DP4=2391,2432,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000594766;MQB=8.04316e-08;MQSB=0.788232;RPB=0.300791;SGB=-0.141083;VDB=0.148495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A678T|766|LOC_Os04g04930|protein_coding|CODING|LOC_Os04g04930.1|5|1) FN3539-S.SNP.4:2379701 chr04:002379701 0 W/2379701-2379701 FN3539-S SNP G -> T AC=1;AN=188;BQB=0.971808;DP=3241;DP4=1666,1530,5,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.45268e-05;MQSB=0.862385;RPB=0.401012;SGB=26.2637;VDB=0.358597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R1246S|1323|LOC_Os04g04940|protein_coding|CODING|LOC_Os04g04940.1|5|1) FN4126-S.SNP.4:2381688 chr04:002381688 0 W/2381688-2381688 FN4126-S SNP G -> A AC=1;AN=182;BQB=0.963901;DP=3447;DP4=1711,1686,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000290107;MQB=2.66767e-06;MQSB=0.99103;RPB=0.969124;SGB=44.1115;VDB=0.702665;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L605|1323|LOC_Os04g04940|protein_coding|CODING|LOC_Os04g04940.1|4|1) FN2630-S.SNP.4:2382276 chr04:002382276 0 W/2382276-2382276 FN2630-S SNP C -> A AC=1;AN=200;BQB=0.487426;DP=4634;DP4=2257,2039,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07842e-16;MQSB=0.954933;RPB=0.160542;SGB=55.5366;VDB=0.410549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A479S|1323|LOC_Os04g04940|protein_coding|CODING|LOC_Os04g04940.1|3|1) FN1519-S.SNP.4:2386012 chr04:002386012 0 W/2386012-2386012 FN1519-S Single Base Substitution G-T INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. W591-4-1.SNP.4:2387874 chr04:002387874 0 W/2387874-2387874 W591-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2332.SNP.4:2388005 chr04:002388005 0 W/2388005-2388005 FN2332 SNP G -> T AC=1;AN=192;BQB=0.0650786;DP=4717;DP4=2242,2265,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.83111e-12;MQSB=0.932599;RPB=0.669698;SGB=94.8539;VDB=0.461675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.4:2401257 chr04:002401257 0 W/2401257-2401257 FN2701-S SNP C -> A AC=1;AN=200;BQB=0.535857;DP=5085;DP4=2503,2261,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.719e-09;MQSB=0.960206;RPB=0.520342;SGB=58.8698;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.4:2412520 chr04:002412520 0 W/2412520-2412520 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.652168;DP=4763;DP4=2219,2324,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00293932;MQB=0.0019071;MQSB=0.851577;RPB=0.961808;SGB=50.9344;VDB=0.89991;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.4:2417906 chr04:002417906 0 W/2417906-2417906 FN-341 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g04990 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1723-S.SNP.4:2420233 chr04:002420233 0 W/2420233-2420233 FN1723-S SNP G -> T AC=1;AN=188;BQB=0.365384;DP=1983;DP4=368,1598,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0151286;MQB=0.654089;MQSB=8.14057e-27;RPB=0.957761;SGB=15.903;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.4:2421206 chr04:002421206 0 W/2421206-2421206 FN1121-S Single Base Substitution G-T INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1411-S.SNP.4:2422220 chr04:002422220 0 W/2422220-2422220 FN1411-S Single Base Substitution C-G INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3803-S.SNP.4:2423296 chr04:002423296 0 W/2423296-2423296 FN3803-S SNP C -> T AC=2;AN=190;BQB=0.95689;DP=3222;DP4=1640,1442,21,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.17462e-23;MQSB=0.999931;RPB=0.940937;SGB=79.845;VDB=0.356685;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R2W|178|LOC_Os04g04999|protein_coding|CODING|LOC_Os04g04999.1|1|1) FN3508-S.SNP.4:2426626 chr04:002426626 0 W/2426626-2426626 FN3508-S SNP A -> C AC=1;AN=188;BQB=0.985543;DP=3219;DP4=1453,1422,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71965e-09;MQSB=0.972023;RPB=0.544482;SGB=14.798;VDB=0.537657;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.4:2427569 chr04:002427569 0 W/2427569-2427569 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.555968;DP=5003;DP4=2175,2451,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.40529e-16;MQSB=0.983303;RPB=0.607966;SGB=55.5366;VDB=0.735525;EFF=INTRON(MODIFIER||||220|LOC_Os04g05010|protein_coding|CODING|LOC_Os04g05010.1|4|1) FN970-S.SNP.4:2428217 chr04:002428217 0 W/2428217-2428217 FN970-S Single Base Substitution C-T INTRON HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN970-S.SNP.4:2428222 chr04:002428222 0 W/2428222-2428222 FN970-S Single Base Substitution T-A INTRON HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN2338.SNP.4:2439889 chr04:002439889 0 W/2439889-2439889 FN2338 SNP T -> C AC=1;AN=192;BQB=0.995927;DP=5104;DP4=2209,2619,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.84358e-12;MQSB=0.997819;RPB=0.958451;SGB=68.2948;VDB=0.047198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.4:2443014 chr04:002443014 0 W/2443014-2443014 FN1197-S Single Base Substitution G-T INTRON HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-168.SNP.4:2445834 chr04:002445834 0 W/2445834-2445834 FN-168 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g05030 serine-rich 25 kDa antigen protein, putative, expressed SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2581-S.SNP.4:2454542 chr04:002454542 0 W/2454542-2454542 FN2581-S SNP C -> G AC=1;AN=198;BQB=0.16563;DP=3777;DP4=1785,1746,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00026476;MQB=5.77579e-05;MQSB=0.617903;RPB=0.9586;SGB=-5.00654;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.4:2455502 chr04:002455502 0 W/2455502-2455502 FN452-S Single Base Substitution T-C INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN794-S.SNP.4:2466448 chr04:002466448 0 W/2466448-2466448 FN794-S Single Base Substitution A-T INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1727-S.SNP.4:2466664 chr04:002466664 0 W/2466664-2466664 FN1727-S SNP C -> T AC=1;AN=188;BQB=7.40289e-07;DP=3758;DP4=1719,1996,23,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29572e-07;MQSB=0.987893;RPB=0.187887;SGB=-418.97;VDB=0.394387;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.4:2467471 chr04:002467471 0 W/2467471-2467471 FN926-S Single Base Substitution G-A INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3039-S.SNP.4:2467999 chr04:002467999 0 W/2467999-2467999 FN3039-S SNP T -> G AC=2;AN=184;BQB=0.99553;DP=3002;DP4=1429,1452,16,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.60713e-20;MQSB=0.987213;RPB=0.999847;SGB=78.7544;VDB=0.643727;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.4:2472892 chr04:002472892 0 W/2472892-2472892 FN1606-S Single Base Substitution A-T INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3881-S.SNP.4:2481172 chr04:002481172 0 W/2481172-2481172 FN3881-S SNP G -> T AC=1;AN=158;BQB=0.893602;DP=2824;DP4=1484,1246,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.5817e-05;MQSB=0.98381;RPB=0.0495429;SGB=47.0672;VDB=0.281616;EFF=INTRON(MODIFIER||||473|LOC_Os04g05050|protein_coding|CODING|LOC_Os04g05050.1|2|1) FN-402.SNP.4:2502323 chr04:002502323 0 W/2502323-2502323 FN-402 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g05070 expressed protein SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2794-S.SNP.4:2503824 chr04:002503824 0 W/2503824-2503824 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.738057;DP=4534;DP4=2498,1731,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.29514e-07;MQSB=0.906409;RPB=0.594329;SGB=58.7391;VDB=0.541492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.4:2510344 chr04:002510344 0 W/2510344-2510344 FN3926-S SNP G -> A AC=1;AN=158;BQB=0.168856;DP=2599;DP4=1207,1233,11,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65492e-09;MQSB=0.998435;RPB=0.100294;SGB=77.8763;VDB=0.285099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.4:2519039 chr04:002519039 0 W/2519039-2519039 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.963347;DP=2915;DP4=1308,1520,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22785e-09;MQSB=0.998374;RPB=0.984689;SGB=43.2083;VDB=0.747415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.4:2519853 chr04:002519853 0 W/2519853-2519853 FN1375-S Single Base Substitution C-G INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN_789-3-1.SNP.4:2522704 chr04:002522704 0 W/2522704-2522704 FN_789-3-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os04g05090 expressed protein SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2540-S.SNP.4:2523975 chr04:002523975 0 W/2523975-2523975 FN2540-S SNP C -> A AC=1;AN=198;BQB=0.478167;DP=4261;DP4=1934,2084,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000108929;MQSB=0.946754;RPB=0.999382;SGB=13.7737;VDB=0.744202;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E1316*|1345|LOC_Os04g05104|protein_coding|CODING|LOC_Os04g05104.1|13|1) FN3809-S.SNP.4:2525324 chr04:002525324 0 W/2525324-2525324 FN3809-S SNP C -> A AC=1;AN=190;BQB=0.292551;DP=1433;DP4=702,642,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.0165615;MQSB=1.64871e-12;RPB=0.806565;SGB=-2.10437;VDB=0.905545;EFF=INTRON(MODIFIER||||1345|LOC_Os04g05104|protein_coding|CODING|LOC_Os04g05104.1|10|1) FN3809-S.SNP.4:2525325 chr04:002525325 0 W/2525325-2525325 FN3809-S SNP C -> T AC=1;AN=190;BQB=0.995831;DP=1437;DP4=723,630,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.000243073;MQSB=1.82589e-11;RPB=0.996534;SGB=35.4339;VDB=0.824652;EFF=INTRON(MODIFIER||||1345|LOC_Os04g05104|protein_coding|CODING|LOC_Os04g05104.1|10|1) FN2465.SNP.4:2533600 chr04:002533600 0 W/2533600-2533600 FN2465 SNP C -> T AC=1;AN=200;BQB=0.883019;DP=4717;DP4=2226,2287,19,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.88563e-22;MQSB=0.959494;RPB=0.835724;SGB=39.9882;VDB=0.857462;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A505T|1345|LOC_Os04g05104|protein_coding|CODING|LOC_Os04g05104.1|2|1) FN964-S.SNP.4:2537059 chr04:002537059 0 W/2537059-2537059 FN964-S Single Base Substitution G-A INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3541-S.SNP.4:2537219 chr04:002537219 0 W/2537219-2537219 FN3541-S SNP A -> T AC=1;AN=188;BQB=0.882517;DP=2648;DP4=999,1553,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000843381;MQSB=0.95224;RPB=0.804133;SGB=14.7255;VDB=0.700305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.4:2543333 chr04:002543333 0 W/2543333-2543333 FN2485 SNP A -> G AC=1;AN=200;BQB=0.674136;DP=4444;DP4=2249,1899,10,4;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0177768;MQB=0.987322;MQSB=9.51625e-05;RPB=0.945724;SGB=21.6694;VDB=0.694132;EFF=INTRON(MODIFIER||||164|LOC_Os04g05120|protein_coding|CODING|LOC_Os04g05120.1|1|1) FN2351.SNP.4:2545510 chr04:002545510 0 W/2545510-2545510 FN2351 SNP C -> T AC=1;AN=190;BQB=0.983571;DP=4848;DP4=2442,2058,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.08366e-13;MQSB=0.986516;RPB=0.829737;SGB=-10.8182;VDB=0.220347;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.4:2548767 chr04:002548767 0 W/2548767-2548767 FN1715-S SNP C -> T AC=1;AN=188;BQB=0.247377;DP=3820;DP4=1973,1798,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.358377;MQB=0.00254867;MQSB=3.79331e-42;RPB=0.994244;SGB=-113.464;VDB=0.125758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.4:2560312 chr04:002560312 0 W/2560312-2560312 FN2640-S SNP C -> G AC=1;AN=200;BQB=0.818147;DP=6233;DP4=2660,3105,17,14;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.249318;MQB=0.7076;MQSB=0;RPB=0.999861;SGB=30.3571;VDB=0.165765;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.4:2562110 chr04:002562110 0 W/2562110-2562110 FN516-S Single Base Substitution C-T INTRON HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN1466-S.SNP.4:2583469 chr04:002583469 0 W/2583469-2583469 FN1466-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g05180 retrotransposon protein, putative, unclassified SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3913-S.SNP.4:2594283 chr04:002594283 0 W/2594283-2594283 FN3913-S SNP T -> G AC=1;AN=158;BQB=0.466479;DP=2673;DP4=1298,1260,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.10737;MQB=0.727415;MQSB=0.743207;RPB=0.747276;SGB=47.0672;VDB=0.954067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaG|N663K|1472|LOC_Os04g05200|protein_coding|CODING|LOC_Os04g05200.1|1|1) FN1376-S.SNP.4:2595913 chr04:002595913 0 W/2595913-2595913 FN1376-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g05200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2755-S.SNP.4:2596474 chr04:002596474 0 W/2596474-2596474 FN2755-S SNP G -> A AC=2;AN=200;BQB=0.957223;DP=5013;DP4=2518,2251,23,21;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.0117694;MQB=4.65043e-16;MQSB=0.991561;RPB=0.667953;SGB=51.2243;VDB=0.927691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1394K|1472|LOC_Os04g05200|protein_coding|CODING|LOC_Os04g05200.1|1|1) FN424-S.SNP.4:2596995 chr04:002596995 0 W/2596995-2596995 FN424-S Single Base Substitution T-G INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN4148-S.SNP.4:2597313 chr04:002597313 0 W/2597313-2597313 FN4148-S SNP C -> T AC=1;AN=170;BQB=0.843967;DP=2366;DP4=1231,1039,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0896027;MQB=0.684752;MQSB=0.00111172;RPB=0.540785;SGB=2.88981;VDB=0.993009;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.4:2599541 chr04:002599541 0 W/2599541-2599541 FN2566-S SNP C -> A AC=1;AN=186;BQB=0.151563;DP=4021;DP4=1663,2102,7,11;HOB=5.78101e-05;ICB=0.000116242;MQ=40;MQ0F=0.0517284;MQB=0.947412;MQSB=1.61261e-41;RPB=0.866274;SGB=54.5295;VDB=0.77062;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.4:2599688 chr04:002599688 0 W/2599688-2599688 FN3354-S SNP T -> C AC=1;AN=184;BQB=0.953915;DP=3188;DP4=1629,1365,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.19185e-07;MQSB=4.40838e-06;RPB=0.722858;SGB=53.2642;VDB=0.376676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.4:2601822 chr04:002601822 0 W/2601822-2601822 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.95495;DP=3135;DP4=1555,1498,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000436881;MQSB=0.995951;RPB=0.77054;SGB=18.3316;VDB=0.914072;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y379|836|LOC_Os04g05210|protein_coding|CODING|LOC_Os04g05210.1|2|1) FN3381-S.SNP.4:2602025 chr04:002602025 0 W/2602025-2602025 FN3381-S SNP T -> G AC=2;AN=184;BQB=0.971661;DP=3796;DP4=1598,2035,12,29;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00658588;MQB=0.00725703;MQSB=0.0281624;RPB=0.812263;SGB=179.874;VDB=0.691003;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V447G|836|LOC_Os04g05210|protein_coding|CODING|LOC_Os04g05210.1|2|1) FN451-S.SNP.4:2602025 chr04:002602025 0 W/2602025-2602025 FN451-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g05210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3456-S.SNP.4:2611948 chr04:002611948 0 W/2611948-2611948 FN3456-S SNP G -> T AC=1;AN=184;BQB=0.751146;DP=3491;DP4=1784,1625,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0300773;MQB=0.000648547;MQSB=5.53089e-20;RPB=0.797995;SGB=13.188;VDB=0.12391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P403T|427|LOC_Os04g05240|protein_coding|CODING|LOC_Os04g05240.1|3|1) FN3788-S.SNP.4:2612529 chr04:002612529 0 W/2612529-2612529 FN3788-S SNP C -> T AC=1;AN=190;BQB=0.997053;DP=4601;DP4=1809,2637,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.271463;MQB=0.212718;MQSB=0.0143969;RPB=0.337352;SGB=11.8805;VDB=0.491933;EFF=INTRON(MODIFIER||||427|LOC_Os04g05240|protein_coding|CODING|LOC_Os04g05240.1|2|1) FN2784-S.SNP.4:2616579 chr04:002616579 0 W/2616579-2616579 FN2784-S SNP G -> A AC=2;AN=196;BQB=0.38291;DP=3006;DP4=1308,1480,24,31;HOB=0.0201999;ICB=0.494951;MQ=35;MQ0F=0.0316035;MQB=0.978496;MQSB=1.31243e-28;RPB=0.926204;SGB=241.556;VDB=0.970232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C86Y|214|LOC_Os04g05250|protein_coding|CODING|LOC_Os04g05250.1|2|1) FN2351.SNP.4:2629129 chr04:002629129 0 W/2629129-2629129 FN2351 SNP C -> T AC=1;AN=192;BQB=0.823758;DP=4696;DP4=2282,2182,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.000145391;MQSB=0.475665;RPB=0.961382;SGB=58.3392;VDB=0.927913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1534-S.SNP.4:2635080 chr04:002635080 0 W/2635080-2635080 FN1534-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1151-S.SNP.4:2635693 chr04:002635693 0 W/2635693-2635693 FN1151-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g05290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN4128-S.SNP.4:2639767 chr04:002639767 0 W/2639767-2639767 FN4128-S SNP T -> A AC=1;AN=182;BQB=0.97657;DP=3171;DP4=1480,1634,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00157679;MQB=5.15616e-06;MQSB=0.072352;RPB=0.238044;SGB=15.6115;VDB=0.505913;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L275*|787|LOC_Os04g05300|protein_coding|CODING|LOC_Os04g05300.1|2|1) FN-191.SNP.4:2640946 chr04:002640946 0 W/2640946-2640946 FN-191 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g05300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3906-S.SNP.4:2644661 chr04:002644661 0 W/2644661-2644661 FN3906-S SNP C -> T AC=1;AN=158;BQB=0.42186;DP=2752;DP4=1377,1271,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00110027;MQSB=0.978007;RPB=0.909513;SGB=-4.76103;VDB=0.839156;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G437|699|LOC_Os04g05310|protein_coding|CODING|LOC_Os04g05310.1|5|1) FN3906-S.SNP.4:2644662 chr04:002644662 0 W/2644662-2644662 FN3906-S SNP C -> T AC=1;AN=158;BQB=0.97341;DP=2761;DP4=1350,1270,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.66345e-06;MQSB=0.902296;RPB=0.667286;SGB=17.2267;VDB=0.861228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G437E|699|LOC_Os04g05310|protein_coding|CODING|LOC_Os04g05310.1|5|1) FN-191.SNP.4:2645331 chr04:002645331 0 W/2645331-2645331 FN-191 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g05310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN4011-S.SNP.4:2646472 chr04:002646472 0 W/2646472-2646472 FN4011-S SNP G -> C AC=1;AN=168;BQB=0.797833;DP=2410;DP4=1044,1237,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.23186e-08;MQSB=0.469496;RPB=0.675466;SGB=61.0344;VDB=0.550367;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.4:2647560 chr04:002647560 0 W/2647560-2647560 FN1709-S SNP A -> T AC=1;AN=186;BQB=0.0973874;DP=2354;DP4=1257,1055,7,9;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=7.97558e-07;MQSB=0.939147;RPB=0.979712;SGB=-35.5377;VDB=0.782052;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.4:2671771 chr04:002671771 0 W/2671771-2671771 FN838-S Single Base Substitution C-T INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3362-S.SNP.4:2673036 chr04:002673036 0 W/2673036-2673036 FN3362-S SNP G -> C AC=1;AN=184;BQB=0.808398;DP=2948;DP4=1451,1405,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32072e-06;MQSB=0.970477;RPB=0.876384;SGB=32.2261;VDB=0.532753;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.4:2673077 chr04:002673077 0 W/2673077-2673077 FN744-S Single Base Substitution A-G INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN964-S.SNP.4:2673383 chr04:002673383 0 W/2673383-2673383 FN964-S Single Base Substitution G-T INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3780-S.SNP.4:2674483 chr04:002674483 0 W/2674483-2674483 FN3780-S SNP T -> A AC=1;AN=190;BQB=0.835625;DP=3151;DP4=1450,1571,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.68451e-06;MQSB=0.995273;RPB=0.956181;SGB=35.4339;VDB=0.869472;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.4:2675751 chr04:002675751 0 W/2675751-2675751 FN2164-S SNP G -> T AC=1;AN=168;BQB=0.27354;DP=3068;DP4=1465,1484,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0192308;MQB=0.000887731;MQSB=0.000266334;RPB=0.211614;SGB=14.2064;VDB=0.104311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.4:2684786 chr04:002684786 0 W/2684786-2684786 FN3371-S SNP T -> C AC=1;AN=184;BQB=0.561555;DP=3233;DP4=1640,1455,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0371172;MQB=0.00634858;MQSB=0.0224478;RPB=0.569129;SGB=18.2315;VDB=0.887389;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D843G|1748|LOC_Os04g05370|protein_coding|CODING|LOC_Os04g05370.1|5|1) FN731-S.SNP.4:2693238 chr04:002693238 0 W/2693238-2693238 FN731-S Single Base Substitution G-A INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN814-S.SNP.4:2695107 chr04:002695107 0 W/2695107-2695107 FN814-S Single Base Substitution G-T INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1745-S.SNP.4:2698658 chr04:002698658 0 W/2698658-2698658 FN1745-S SNP T -> C AC=2;AN=186;BQB=0.999983;DP=3365;DP4=1633,1694,16,11;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=2.64035e-12;MQSB=0.474781;RPB=0.999981;SGB=-9.02352;VDB=0.426916;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.4:2715390 chr04:002715390 0 W/2715390-2715390 FN4151-S SNP C -> G AC=1;AN=170;BQB=0.998715;DP=2557;DP4=1381,1112,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00977708;MQB=0.00102106;MQSB=0.0012208;RPB=0.923357;SGB=65.6427;VDB=0.98872;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G798R|828|LOC_Os04g05420|protein_coding|CODING|LOC_Os04g05420.1|7|1) FN3598-S.SNP.4:2719000 chr04:002719000 0 W/2719000-2719000 FN3598-S SNP G -> A AC=1;AN=188;BQB=0.977921;DP=2707;DP4=1098,1533,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.029553;MQB=0.107295;MQSB=1.57332e-06;RPB=0.745274;SGB=44.4357;VDB=0.00537451;EFF=INTRON(MODIFIER||||828|LOC_Os04g05420|protein_coding|CODING|LOC_Os04g05420.1|4|1) FN2085-S.SNP.4:2719133 chr04:002719133 0 W/2719133-2719133 FN2085-S SNP G -> A AC=1;AN=168;BQB=0.914588;DP=3540;DP4=1873,1612,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0338983;MQB=0.0329431;MQSB=9.51329e-12;RPB=0.999988;SGB=17.068;VDB=0.993675;EFF=INTRON(MODIFIER||||828|LOC_Os04g05420|protein_coding|CODING|LOC_Os04g05420.1|4|1) FN2705-S.SNP.4:2719422 chr04:002719422 0 W/2719422-2719422 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.929311;DP=4281;DP4=2486,1578,6,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000654456;MQSB=0.0137832;RPB=0.921967;SGB=25.849;VDB=0.794525;EFF=INTRON(MODIFIER||||828|LOC_Os04g05420|protein_coding|CODING|LOC_Os04g05420.1|4|1) FN1439-S.SNP.4:2721075 chr04:002721075 0 W/2721075-2721075 FN1439-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2084-S.SNP.4:2730889 chr04:002730889 0 W/2730889-2730889 FN2084-S SNP C -> A AC=1;AN=168;BQB=0.687492;DP=2300;DP4=591,1667,3,16;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000434783;MQB=1.54513e-06;MQSB=5.4439e-13;RPB=0.903809;SGB=-38.3665;VDB=0.116832;EFF=INTRON(MODIFIER||||414|LOC_Os04g05430|protein_coding|CODING|LOC_Os04g05430.2|6|1) FN-258.SNP.4:2733272 chr04:002733272 0 W/2733272-2733272 FN-258 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g05430 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2602-S.SNP.4:2734229 chr04:002734229 0 W/2734229-2734229 FN2602-S SNP C -> T AC=1;AN=186;BQB=0.976653;DP=3889;DP4=1872,1825,4,9;HOB=5.78101e-05;ICB=0.000116242;MQ=41;MQ0F=0.0105426;MQB=0.496826;MQSB=0.0546586;RPB=0.840716;SGB=54.144;VDB=0.428843;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W174*|414|LOC_Os04g05430|protein_coding|CODING|LOC_Os04g05430.2|4|1);LOF=(LOC_Os04g05430|LOC_Os04g05430|1|1.00);NMD=(LOC_Os04g05430|LOC_Os04g05430|1|1.00) FN2392.SNP.4:2735488 chr04:002735488 0 W/2735488-2735488 FN2392 SNP G -> A AC=1;AN=200;BQB=0.574172;DP=5283;DP4=2537,2414,9,16;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0526216;MQB=2.43041e-07;MQSB=4.24253e-05;RPB=0.786132;SGB=-68.0744;VDB=0.56802;EFF=INTRON(MODIFIER||||414|LOC_Os04g05430|protein_coding|CODING|LOC_Os04g05430.2|2|1) FN2392.SNP.4:2735490 chr04:002735490 0 W/2735490-2735490 FN2392 SNP G -> A AC=1;AN=200;BQB=0.921455;DP=5270;DP4=2575,2453,10,10;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0542694;MQB=5.10933e-07;MQSB=5.9086e-05;RPB=0.469927;SGB=61.9006;VDB=0.220177;EFF=INTRON(MODIFIER||||414|LOC_Os04g05430|protein_coding|CODING|LOC_Os04g05430.2|2|1) FN2392.SNP.4:2735495 chr04:002735495 0 W/2735495-2735495 FN2392 SNP G -> A AC=1;AN=200;BQB=0.550223;DP=5233;DP4=2556,2408,9,12;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0590483;MQB=1.8402e-06;MQSB=1.46265e-06;RPB=0.486402;SGB=39.9056;VDB=0.323417;EFF=INTRON(MODIFIER||||414|LOC_Os04g05430|protein_coding|CODING|LOC_Os04g05430.2|2|1) FN1442-S.SNP.4:2738117 chr04:002738117 0 W/2738117-2738117 FN1442-S Single Base Substitution G-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1442-S.SNP.4:2738118 chr04:002738118 0 W/2738118-2738118 FN1442-S Single Base Substitution A-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2338.SNP.4:2740847 chr04:002740847 0 W/2740847-2740847 FN2338 SNP G -> T AC=1;AN=192;BQB=0.543668;DP=5064;DP4=2312,2498,9,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18923e-14;MQSB=0.823114;RPB=0.952626;SGB=-40.5556;VDB=0.673232;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.4:2742274 chr04:002742274 0 W/2742274-2742274 FN4120-S SNP A -> T AC=2;AN=182;BQB=0.955745;DP=2521;DP4=1358,1075,19,10;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.00317334;MQB=6.31795e-15;MQSB=4.70464e-06;RPB=0.0855598;SGB=91.8015;VDB=0.144315;EFF=INTRON(MODIFIER||||434|LOC_Os04g05450|protein_coding|CODING|LOC_Os04g05450.1|5|1) FN4120-S.SNP.4:2742276 chr04:002742276 0 W/2742276-2742276 FN4120-S SNP G -> T AC=2;AN=182;BQB=0.996554;DP=2514;DP4=1355,1081,19,9;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.00318218;MQB=1.75323e-14;MQSB=8.3505e-06;RPB=0.242318;SGB=120.796;VDB=0.13715;EFF=INTRON(MODIFIER||||434|LOC_Os04g05450|protein_coding|CODING|LOC_Os04g05450.1|5|1) FN-363.SNP.4:2744668 chr04:002744668 0 W/2744668-2744668 FN-363 Single Base Substitution C-T INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. W591-4-1.SNP.4:2759781 chr04:002759781 0 W/2759781-2759781 W591-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2259-S.SNP.4:2761845 chr04:002761845 0 W/2761845-2761845 FN2259-S SNP G -> A AC=1;AN=190;BQB=0.833203;DP=3400;DP4=2527,522,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.00146e-06;MQSB=1.4127e-20;RPB=0.153671;SGB=44.5415;VDB=0.39524;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.4:2766703 chr04:002766703 0 W/2766703-2766703 FN4300-S SNP T -> A AC=1;AN=170;BQB=0.975364;DP=1916;DP4=1022,785,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0537578;MQB=0.44985;MQSB=1.49446e-27;RPB=0.722214;SGB=34.5445;VDB=0.384453;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.4:2769757 chr04:002769757 0 W/2769757-2769757 FN916-S Single Base Substitution A-G INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2531-S.SNP.4:2769758 chr04:002769758 0 W/2769758-2769758 FN2531-S SNP T -> C AC=1;AN=186;BQB=0.975095;DP=3822;DP4=1975,1654,5,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.58946e-07;MQSB=0.0362638;RPB=0.310398;SGB=32.9588;VDB=0.0418061;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.4:2770988 chr04:002770988 0 W/2770988-2770988 FN478-S Single Base Substitution G-A INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2372.SNP.4:2772621 chr04:002772621 0 W/2772621-2772621 FN2372 SNP C -> T AC=1;AN=192;BQB=0.633857;DP=4690;DP4=2180,2229,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00149254;MQB=4.534e-11;MQSB=0.894058;RPB=0.835502;SGB=64.8148;VDB=0.881382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D199N|311|LOC_Os04g05480|protein_coding|CODING|LOC_Os04g05480.1|1|1) FN2215-S.SNP.4:2791895 chr04:002791895 0 W/2791895-2791895 FN2215-S SNP T -> C AC=1;AN=190;BQB=0.686685;DP=4191;DP4=1818,1765,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0231448;MQB=3.84587e-05;MQSB=0.743567;RPB=0.172819;SGB=82.301;VDB=0.414377;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N1476|2027|LOC_Os04g05520|protein_coding|CODING|LOC_Os04g05520.1|2|1) FN1108-S.SNP.4:2793955 chr04:002793955 0 W/2793955-2793955 FN1108-S Single Base Substitution A-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN418-S.SNP.4:2797104 chr04:002797104 0 W/2797104-2797104 FN418-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g05530 transposon protein, putative, unclassified, expressed SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN404-S.SNP.4:2806330 chr04:002806330 0 W/2806330-2806330 FN404-S Single Base Substitution G-A INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3748-S.SNP.4:2807949 chr04:002807949 0 W/2807949-2807949 FN3748-S SNP G -> C AC=2;AN=190;BQB=0.992328;DP=2685;DP4=1233,1318,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.66201e-15;MQSB=0.99989;RPB=0.993697;SGB=82.301;VDB=0.257165;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.4:2808644 chr04:002808644 0 W/2808644-2808644 FN1736-S SNP A -> G AC=1;AN=186;BQB=0.987054;DP=2873;DP4=1464,1379,12,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.56591e-09;MQSB=0.777365;RPB=0.521673;SGB=28.6195;VDB=0.685994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.4:2813026 chr04:002813026 0 W/2813026-2813026 FN2293 SNP C -> T AC=1;AN=192;BQB=0.911642;DP=4868;DP4=2455,2120,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000410846;MQB=1.77695e-11;MQSB=0.982768;RPB=0.707189;SGB=90.2896;VDB=0.271768;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.4:2816039 chr04:002816039 0 W/2816039-2816039 FN926-S Single Base Substitution G-T INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN906-S.SNP.4:2819550 chr04:002819550 0 W/2819550-2819550 FN906-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g05570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN1337-S.SNP.4:2820941 chr04:002820941 0 W/2820941-2820941 FN1337-S Single Base Substitution G-C INTRON HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2653-S.SNP.4:2822779 chr04:002822779 0 W/2822779-2822779 FN2653-S SNP A -> C AC=1;AN=200;BQB=0.669637;DP=4524;DP4=1961,2261,12,16;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00353669;MQB=2.55116e-08;MQSB=3.92302e-05;RPB=0.972774;SGB=90.7419;VDB=0.793731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.4:2824948 chr04:002824948 0 W/2824948-2824948 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.493712;DP=2499;DP4=934,1485,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.03864e-05;MQSB=0.410203;RPB=0.999693;SGB=44.5415;VDB=0.49956;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.4:2839931 chr04:002839931 0 W/2839931-2839931 FN-247 Single Base Substitution G-A INTERGENIC HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-4.SNP.4:2841697 chr04:002841697 0 W/2841697-2841697 FN-4 Single Base Substitution A-G INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN2753-S.SNP.4:2844729 chr04:002844729 0 W/2844729-2844729 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.804244;DP=4811;DP4=2179,2354,7,9;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.0856371;MQB=0.910979;MQSB=0;RPB=0.519737;SGB=68.0801;VDB=0.0595827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R601C|876|LOC_Os04g05590|protein_coding|CODING|LOC_Os04g05590.1|4|1) FN1481-S.SNP.4:2848303 chr04:002848303 0 W/2848303-2848303 FN1481-S Single Base Substitution T-C INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3893-S.SNP.4:2851182 chr04:002851182 0 W/2851182-2851182 FN3893-S SNP C -> T AC=1;AN=158;BQB=0.861727;DP=2888;DP4=1569,1238,13,14;HOB=8.01154e-05;ICB=0.000161245;MQ=21;MQ0F=0.177285;MQB=0.697957;MQSB=5.56777e-07;RPB=0.999019;SGB=81.2457;VDB=0.512313;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D902N|1038|LOC_Os04g05610|protein_coding|CODING|LOC_Os04g05610.1|3|1) FN3893-S.SNP.4:2851183 chr04:002851183 0 W/2851183-2851183 FN3893-S SNP A -> C AC=1;AN=158;BQB=0.931182;DP=2892;DP4=1558,1226,10,15;HOB=8.01154e-05;ICB=0.000161245;MQ=21;MQ0F=0.177386;MQB=0.830686;MQSB=1.19433e-06;RPB=0.94768;SGB=74.5068;VDB=0.527169;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S901R|1038|LOC_Os04g05610|protein_coding|CODING|LOC_Os04g05610.1|3|1) FN2230-S.SNP.4:2851889 chr04:002851889 0 W/2851889-2851889 FN2230-S SNP C -> T AC=1;AN=190;BQB=0.842167;DP=4861;DP4=2238,2240,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.125489;MQB=0.476937;MQSB=0.000328062;RPB=0.912875;SGB=46.7622;VDB=0.509035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G705E|1038|LOC_Os04g05610|protein_coding|CODING|LOC_Os04g05610.1|2|1) FN3343-S.SNP.4:2856864 chr04:002856864 0 W/2856864-2856864 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.519853;DP=2973;DP4=1370,1471,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90696e-05;MQSB=0.987036;RPB=0.801409;SGB=42.7914;VDB=0.690334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.4:2859023 chr04:002859023 0 W/2859023-2859023 FN4165-S SNP G -> T AC=1;AN=170;BQB=0.233667;DP=2774;DP4=1179,1520,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.65735e-05;MQSB=0.0176965;RPB=0.999335;SGB=52.0913;VDB=0.436022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.4:2861842 chr04:002861842 0 W/2861842-2861842 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.371083;DP=5048;DP4=2359,2370,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000396197;MQB=2.29505e-11;MQSB=0.786186;RPB=0.55152;SGB=99.1879;VDB=0.00495325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.4:2870452 chr04:002870452 0 W/2870452-2870452 FN3865-S SNP G -> A AC=1;AN=158;BQB=0.727942;DP=2443;DP4=1157,1225,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0384773;MQB=0.121426;MQSB=1.44932e-07;RPB=0.780768;SGB=27.3346;VDB=0.486768;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.4:2879408 chr04:002879408 0 W/2879408-2879408 W23-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2417.SNP.4:2881216 chr04:002881216 0 W/2881216-2881216 FN2417 SNP C -> A AC=1;AN=200;BQB=0.850035;DP=4857;DP4=2279,2173,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.73051e-07;MQSB=0.649776;RPB=0.800554;SGB=24.2746;VDB=0.675875;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.4:2884068 chr04:002884068 0 W/2884068-2884068 FN751-S Single Base Substitution T-C INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN751-S.SNP.4:2884182 chr04:002884182 0 W/2884182-2884182 FN751-S Single Base Substitution A-G INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN-396.SNP.4:2885413 chr04:002885413 0 W/2885413-2885413 FN-396 Single Base Substitution T-C INTERGENIC HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2536-S.SNP.4:2885683 chr04:002885683 0 W/2885683-2885683 FN2536-S SNP A -> G AC=1;AN=198;BQB=0.0253384;DP=4417;DP4=2307,1943,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00475436;MQB=0.000705202;MQSB=0.0030953;RPB=0.309751;SGB=40.149;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.4:2885683 chr04:002885683 0 W/2885683-2885683 FN850-S Single Base Substitution A-G INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN3729-S.SNP.4:2890390 chr04:002890390 0 W/2890390-2890390 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.966182;DP=3230;DP4=1508,1550,21,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.13502e-19;MQSB=0.929315;RPB=0.952162;SGB=135.619;VDB=0.508483;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K189|194|LOC_Os04g05650|protein_coding|CODING|LOC_Os04g05650.1|4|1) FN1280-S.SNP.4:2894290 chr04:002894290 0 W/2894290-2894290 FN1280-S Single Base Substitution A-C INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3452-S.SNP.4:2896709 chr04:002896709 0 W/2896709-2896709 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.997557;DP=3913;DP4=1843,1989,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.73937e-07;MQSB=0.799591;RPB=0.71807;SGB=53.2642;VDB=0.25876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R390C|1821|LOC_Os04g05670|protein_coding|CODING|LOC_Os04g05670.1|1|1) FN2152-S.SNP.4:2898224 chr04:002898224 0 W/2898224-2898224 FN2152-S SNP C -> T AC=1;AN=168;BQB=0.861449;DP=2406;DP4=1260,1085,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000415628;MQB=0.00565069;MQSB=0.885134;RPB=0.960338;SGB=7.59999;VDB=0.0925341;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P895S|1821|LOC_Os04g05670|protein_coding|CODING|LOC_Os04g05670.1|1|1) FN1255-S.SNP.4:2900462 chr04:002900462 0 W/2900462-2900462 FN1255-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g05670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1561-S.SNP.4:2902454 chr04:002902454 0 W/2902454-2902454 FN1561-S Single Base Substitution C-T INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN982-S.SNP.4:2903469 chr04:002903469 0 W/2903469-2903469 FN982-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g05680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN944-S.SNP.4:2903866 chr04:002903866 0 W/2903866-2903866 FN944-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g05680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1025-S.SNP.4:2905731 chr04:002905731 0 W/2905731-2905731 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2689-S.SNP.4:2906101 chr04:002906101 0 W/2906101-2906101 FN2689-S SNP C -> A AC=1;AN=200;BQB=0.611572;DP=5187;DP4=2423,2489,9,6;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.03663;MQB=0.197497;MQSB=1.34091e-29;RPB=0.831697;SGB=63.4749;VDB=0.87469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.4:2906274 chr04:002906274 0 W/2906274-2906274 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN3557-S.SNP.4:2909712 chr04:002909712 0 W/2909712-2909712 FN3557-S SNP T -> A AC=1;AN=188;BQB=0.94392;DP=2918;DP4=1339,1516,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42738e-09;MQSB=0.717579;RPB=0.961664;SGB=62.6088;VDB=0.733485;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.4:2910490 chr04:002910490 0 W/2910490-2910490 FN482-S Single Base Substitution C-T INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN482-S.SNP.4:2916671 chr04:002916671 0 W/2916671-2916671 FN482-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g05710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN4141-S.SNP.4:2920828 chr04:002920828 0 W/2920828-2920828 FN4141-S SNP A -> G AC=1;AN=170;BQB=0.995799;DP=2531;DP4=1087,1353,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000790201;MQB=9.14559e-06;MQSB=0.00936224;RPB=0.480745;SGB=31.4354;VDB=0.952754;EFF=INTRON(MODIFIER||||1513|LOC_Os04g05710|protein_coding|CODING|LOC_Os04g05710.1|1|1) FN3529-S.SNP.4:2921886 chr04:002921886 0 W/2921886-2921886 FN3529-S SNP G -> T AC=1;AN=188;BQB=0.911213;DP=2778;DP4=1565,1140,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000359971;MQB=0.000594844;MQSB=0.75887;RPB=0.343986;SGB=30.8063;VDB=0.787992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.4:2922332 chr04:002922332 0 W/2922332-2922332 FN2617-S SNP G -> A AC=1;AN=198;BQB=0.975849;DP=4056;DP4=1955,1926,11,20;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00295858;MQB=7.71288e-11;MQSB=0.804287;RPB=0.481975;SGB=101.266;VDB=0.700949;EFF=INTRON(MODIFIER||||126|LOC_Os04g05720|protein_coding|CODING|LOC_Os04g05720.1|2|1) FN4099-S.SNP.4:2925604 chr04:002925604 0 W/2925604-2925604 FN4099-S SNP G -> C AC=1;AN=178;BQB=0.99826;DP=2063;DP4=1119,843,5,5;HOB=6.31233e-05;ICB=0.000126956;MQ=47;MQ0F=0.00436258;MQB=0.00393017;MQSB=0.28301;RPB=0.809702;SGB=39.6007;VDB=0.234935;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.4:2928839 chr04:002928839 0 W/2928839-2928839 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.889594;DP=1474;DP4=411,945,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00119151;MQSB=0.0215641;RPB=0.237512;SGB=21.7749;VDB=0.0435222;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.4:2932031 chr04:002932031 0 W/2932031-2932031 FN1748-S SNP C -> T AC=1;AN=188;BQB=0.273206;DP=3106;DP4=1583,1458,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0318738;MQB=3.11683e-05;MQSB=3.72384e-12;RPB=0.998653;SGB=-13.9132;VDB=0.438843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D804N|1234|LOC_Os04g05730|protein_coding|CODING|LOC_Os04g05730.1|2|1) FN2195-S.SNP.4:2933113 chr04:002933113 0 W/2933113-2933113 FN2195-S SNP G -> T AC=1;AN=190;BQB=0.851763;DP=5328;DP4=2896,2077,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0388514;MQB=0.576167;MQSB=0;RPB=0.91044;SGB=85.5263;VDB=0.675174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A443D|1234|LOC_Os04g05730|protein_coding|CODING|LOC_Os04g05730.1|2|1) FN1097-S.SNP.4:2934081 chr04:002934081 0 W/2934081-2934081 FN1097-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g05730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. W470-2-1.SNP.4:2950394 chr04:002950394 0 W/2950394-2950394 W470-2-1 Single Base Substitution G-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1622-S.SNP.4:2955037 chr04:002955037 0 W/2955037-2955037 FN1622-S Single Base Substitution A-G INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN4138-S.SNP.4:2956523 chr04:002956523 0 W/2956523-2956523 FN4138-S SNP A -> T AC=1;AN=170;BQB=0.820587;DP=2387;DP4=1201,1065,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.36422e-05;MQSB=0.999609;RPB=0.618691;SGB=24.5502;VDB=0.659505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K72M|380|LOC_Os04g05760|protein_coding|CODING|LOC_Os04g05760.1|1|1) FN322-S.SNP.4:2961971 chr04:002961971 0 W/2961971-2961971 FN322-S Single Base Substitution G-A INTRON HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3378-S.SNP.4:2972111 chr04:002972111 0 W/2972111-2972111 FN3378-S SNP A -> T AC=2;AN=184;BQB=0.202231;DP=3550;DP4=1825,1452,28,29;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=8.00943e-18;MQSB=0.763523;RPB=0.637229;SGB=81.747;VDB=0.788221;EFF=INTRON(MODIFIER||||209|LOC_Os04g05790|protein_coding|CODING|LOC_Os04g05790.1|3|1) FN-53.SNP.4:2981012 chr04:002981012 0 W/2981012-2981012 FN-53 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g05800 retrotransposon protein, putative, unclassified, expressed SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN911-S.SNP.4:2986719 chr04:002986719 0 W/2986719-2986719 FN911-S Single Base Substitution G-A INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3951-S.SNP.4:2988740 chr04:002988740 0 W/2988740-2988740 FN3951-S SNP G -> C AC=1;AN=168;BQB=0.993825;DP=2512;DP4=1071,1305,1,8;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000796178;MQB=0.000504406;MQSB=0.0173382;RPB=0.883885;SGB=34.4498;VDB=0.966942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.4:2992540 chr04:002992540 0 W/2992540-2992540 FN2235-S SNP A -> T AC=1;AN=190;BQB=0.21925;DP=4769;DP4=1921,2474,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0319e-13;MQSB=0.682878;RPB=0.988337;SGB=112.85;VDB=0.756312;EFF=INTRON(MODIFIER||||739|LOC_Os04g05820|protein_coding|CODING|LOC_Os04g05820.1|1|1) FN3494-S.SNP.4:2995109 chr04:002995109 0 W/2995109-2995109 FN3494-S SNP G -> T AC=1;AN=184;BQB=0.881853;DP=3237;DP4=1627,1506,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0194625;MQB=0.352581;MQSB=8.41738e-07;RPB=0.302096;SGB=39.2697;VDB=0.359018;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.4:2998393 chr04:002998393 0 W/2998393-2998393 FN742-S Single Base Substitution A-G INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN-145.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN-145 Single Base Substitution G-C INTRON HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1115-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN1115-S Single Base Substitution G-C INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1646-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN1646-S Single Base Substitution G-C INTRON HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1736-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN1736-S SNP G -> C AC=1;AN=188;BQB=0.994514;DP=3542;DP4=1808,1693,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.79736e-15;MQSB=0.83402;RPB=0.57958;SGB=78.5038;VDB=0.200195;EFF=INTRON(MODIFIER||||298|LOC_Os04g05840|protein_coding|CODING|LOC_Os04g05840.1|1|1) FN2296.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN2296 SNP G -> C AC=2;AN=192;BQB=0.832143;DP=4960;DP4=2322,2361,30,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.34974e-29;MQSB=0.693893;RPB=0.575974;SGB=-52.3182;VDB=0.535239;EFF=INTRON(MODIFIER||||298|LOC_Os04g05840|protein_coding|CODING|LOC_Os04g05840.1|1|1) FN2779-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN2779-S SNP G -> C AC=1;AN=186;BQB=0.997093;DP=4000;DP4=1744,2057,10,14;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.59211e-14;MQSB=0.915407;RPB=0.461323;SGB=76.1002;VDB=0.525653;EFF=INTRON(MODIFIER||||298|LOC_Os04g05840|protein_coding|CODING|LOC_Os04g05840.1|1|1) FN3832-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN3832-S SNP G -> C AC=2;AN=190;BQB=0.924379;DP=2762;DP4=1215,1436,7,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41038e-13;MQSB=0.999822;RPB=0.869474;SGB=90.0802;VDB=0.462199;EFF=INTRON(MODIFIER||||298|LOC_Os04g05840|protein_coding|CODING|LOC_Os04g05840.1|1|1) FN510-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN510-S Single Base Substitution G-C INTRON HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN585-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN585-S Single Base Substitution G-C INTRON HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN685-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN685-S Single Base Substitution G-C INTRON HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN714-S.SNP.4:3002231 chr04:003002231 0 W/3002231-3002231 FN714-S Single Base Substitution G-C INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1764-S.SNP.4:3003192 chr04:003003192 0 W/3003192-3003192 FN1764-S SNP G -> T AC=1;AN=188;BQB=0.0191863;DP=3113;DP4=870,2205,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86006e-05;MQSB=0.863906;RPB=0.782384;SGB=-124.805;VDB=0.194354;EFF=INTRON(MODIFIER||||298|LOC_Os04g05840|protein_coding|CODING|LOC_Os04g05840.1|1|1) FN2554-S.SNP.4:3004756 chr04:003004756 0 W/3004756-3004756 FN2554-S SNP T -> C AC=2;AN=186;BQB=0.98872;DP=3890;DP4=1733,1945,23,19;HOB=0.0212741;ICB=0.494682;MQ=44;MQ0F=0.0033419;MQB=4.19577e-05;MQSB=0.144061;RPB=0.158589;SGB=140.812;VDB=0.670088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.4:3021364 chr04:003021364 0 W/3021364-3021364 FN1227-S Single Base Substitution A-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2398.SNP.4:3024265 chr04:003024265 0 W/3024265-3024265 FN2398 SNP C -> T AC=1;AN=200;BQB=0.590125;DP=4240;DP4=2195,1722,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.16789e-08;MQSB=0.693373;RPB=0.941998;SGB=63.4749;VDB=0.0882095;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1927|2126|LOC_Os04g05880|protein_coding|CODING|LOC_Os04g05880.1|14|1) FN778-S.SNP.4:3026352 chr04:003026352 0 W/3026352-3026352 FN778-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g05880 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN-188.SNP.4:3029269 chr04:003029269 0 W/3029269-3029269 FN-188 Single Base Substitution A-G INTRON HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3710-S.SNP.4:3034944 chr04:003034944 0 W/3034944-3034944 FN3710-S SNP G -> C AC=1;AN=190;BQB=0.837836;DP=2939;DP4=1380,1479,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.208915;MQB=0.869009;MQSB=0.990552;RPB=0.817898;SGB=80.9724;VDB=0.418869;EFF=INTRON(MODIFIER||||2126|LOC_Os04g05880|protein_coding|CODING|LOC_Os04g05880.1|3|1) FN3934-S.SNP.4:3040379 chr04:003040379 0 W/3040379-3040379 FN3934-S SNP G -> A AC=1;AN=158;BQB=0.547895;DP=2514;DP4=1238,1163,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=18;MQ0F=0.280827;MQB=0.520028;MQSB=0.00821104;RPB=0.803615;SGB=60.1755;VDB=0.443024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.4:3041171 chr04:003041171 0 W/3041171-3041171 FN2496 SNP A -> G AC=1;AN=200;BQB=0.133659;DP=4207;DP4=1999,1629,11,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=8.2966e-08;MQSB=0.975252;RPB=0.965442;SGB=-37.6845;VDB=0.860361;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.4:3052799 chr04:003052799 0 W/3052799-3052799 W464-2-1 Single Base Substitution T-C INTRON HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN_829-2-5.SNP.4:3053044 chr04:003053044 0 W/3053044-3053044 FN_829-2-5 Single Base Substitution G-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN-127.SNP.4:3053521 chr04:003053521 0 W/3053521-3053521 FN-127 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g05900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-99.SNP.4:3053521 chr04:003053521 0 W/3053521-3053521 FN-99 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g05900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN689-S.SNP.4:3053521 chr04:003053521 0 W/3053521-3053521 FN689-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g05900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN721-S.SNP.4:3054497 chr04:003054497 0 W/3054497-3054497 FN721-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g05900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN4081-S.SNP.4:3057049 chr04:003057049 0 W/3057049-3057049 FN4081-S SNP C -> A AC=2;AN=182;BQB=0.807819;DP=2276;DP4=1086,1115,5,6;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000439367;MQB=0.000459724;MQSB=0.812221;RPB=0.284686;SGB=44.1115;VDB=0.270781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E20D|74|LOC_Os04g05910|protein_coding|CODING|LOC_Os04g05910.1|1|1) FN2436.SNP.4:3058981 chr04:003058981 0 W/3058981-3058981 FN2436 SNP A -> G AC=1;AN=198;BQB=0.9941;DP=4240;DP4=1905,2024,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00566038;MQB=7.23428e-15;MQSB=0.974456;RPB=0.858794;SGB=60.747;VDB=0.877503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.4:3059581 chr04:003059581 0 W/3059581-3059581 FN2455 SNP G -> T AC=2;AN=200;BQB=0.558494;DP=4534;DP4=2330,1972,22,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00397;MQB=3.40366e-16;MQSB=0.861093;RPB=0.918629;SGB=164.789;VDB=0.714358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.4:3063018 chr04:003063018 0 W/3063018-3063018 FN1156-XA21 Single Base Substitution A-T INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1467-S.SNP.4:3063402 chr04:003063402 0 W/3063402-3063402 FN1467-S Single Base Substitution A-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3827-S.SNP.4:3064353 chr04:003064353 0 W/3064353-3064353 FN3827-S SNP C -> T AC=1;AN=190;BQB=0.592979;DP=3040;DP4=1485,1431,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00296053;MQB=2.61679e-08;MQSB=0.0359013;RPB=0.671385;SGB=85.5263;VDB=0.156715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R455H|638|LOC_Os04g05920|protein_coding|CODING|LOC_Os04g05920.1|5|1) FN-286.SNP.4:3065288 chr04:003065288 0 W/3065288-3065288 FN-286 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g05920 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2685-S.SNP.4:3074304 chr04:003074304 0 W/3074304-3074304 FN2685-S SNP A -> T AC=2;AN=200;BQB=0.847283;DP=4803;DP4=2567,2011,22,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00395586;MQB=1.41219e-21;MQSB=0.306844;RPB=0.364275;SGB=183.209;VDB=0.0121571;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.4:3076968 chr04:003076968 0 W/3076968-3076968 FN781-S Single Base Substitution A-G INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1366-S.SNP.4:3077745 chr04:003077745 0 W/3077745-3077745 FN1366-S Single Base Substitution A-C INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN751-S.SNP.4:3081352 chr04:003081352 0 W/3081352-3081352 FN751-S Single Base Substitution G-C INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3555-S.SNP.4:3083424 chr04:003083424 0 W/3083424-3083424 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.947419;DP=2988;DP4=1390,1528,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.93713e-17;MQSB=0.984381;RPB=0.802128;SGB=54.0524;VDB=0.0331694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D12N|203|LOC_Os04g05950|protein_coding|CODING|LOC_Os04g05950.1|1|1) FN2460.SNP.4:3087841 chr04:003087841 0 W/3087841-3087841 FN2460 SNP C -> T AC=1;AN=200;BQB=0.986676;DP=5389;DP4=2358,2556,156,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0317313;MQB=0;MQSB=2.37386e-19;RPB=1.36807e-06;SGB=-3137.37;VDB=1.07128e-19;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P91L|292|LOC_Os04g05960|protein_coding|CODING|LOC_Os04g05960.1|2|1) FN1436-S.SNP.4:3088287 chr04:003088287 0 W/3088287-3088287 FN1436-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g05960 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3050-S.SNP.4:3088383 chr04:003088383 0 W/3088383-3088383 FN3050-S SNP C -> T AC=2;AN=184;BQB=0.991974;DP=3058;DP4=1422,1521,11,17;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00327011;MQB=2.58631e-15;MQSB=0.86066;RPB=0.999999;SGB=56.0583;VDB=0.205973;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R214C|292|LOC_Os04g05960|protein_coding|CODING|LOC_Os04g05960.1|3|1) FN1076-S.SNP.4:3090101 chr04:003090101 0 W/3090101-3090101 FN1076-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g05970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3563-S.SNP.4:3096471 chr04:003096471 0 W/3096471-3096471 FN3563-S SNP G -> C AC=2;AN=188;BQB=0.897644;DP=1598;DP4=245,1278,2,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.5294e-14;MQSB=0.976897;RPB=0.753383;SGB=90.7562;VDB=0.545013;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.4:3098140 chr04:003098140 0 W/3098140-3098140 FN-110 Single Base Substitution C-G INTRON HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-103.SNP.4:3101012 chr04:003101012 0 W/3101012-3101012 FN-103 Single Base Substitution T-C INTERGENIC HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN1722-S.SNP.4:3101846 chr04:003101846 0 W/3101846-3101846 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.602273;DP=1825;DP4=245,1492,4,14;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00383562;MQB=2.44862e-08;MQSB=0.371264;RPB=0.838164;SGB=31.1628;VDB=0.297533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.4:3107364 chr04:003107364 0 W/3107364-3107364 FN1232-S Single Base Substitution C-T INTRON HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3376-S.SNP.4:3108243 chr04:003108243 0 W/3108243-3108243 FN3376-S SNP G -> A AC=2;AN=184;BQB=0.984104;DP=2725;DP4=1315,1279,20,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.1042e-21;MQSB=0.98079;RPB=0.638808;SGB=175.352;VDB=0.600952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L355F|1280|LOC_Os04g06000|protein_coding|CODING|LOC_Os04g06000.1|4|1) FN1413-S.SNP.4:3109812 chr04:003109812 0 W/3109812-3109812 FN1413-S Single Base Substitution T-G INTRON HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2212-S.SNP.4:3110770 chr04:003110770 0 W/3110770-3110770 FN2212-S SNP A -> C AC=2;AN=190;BQB=0.874589;DP=4856;DP4=2220,2335,35,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.89771e-38;MQSB=0.887455;RPB=0.596891;SGB=238.672;VDB=0.546991;EFF=INTRON(MODIFIER||||1280|LOC_Os04g06000|protein_coding|CODING|LOC_Os04g06000.1|2|1) FN3311-S.SNP.4:3113116 chr04:003113116 0 W/3113116-3113116 FN3311-S Single Base Substitution T-G INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1065-S.SNP.4:3114322 chr04:003114322 0 W/3114322-3114322 FN1065-S Single Base Substitution T-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN-118.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN-118 Single Base Substitution C-T STOP_GAINED HOMO LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-41.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN-41 Single Base Substitution C-T STOP_GAINED Homo LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN-91.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN-91 Single Base Substitution C-T STOP_GAINED HOMO LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN1163-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN1163-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2309.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN2309 SNP C -> T AC=2;AN=192;BQB=0.85713;DP=4651;DP4=2436,1962,18,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.63267e-19;MQSB=0.951855;RPB=0.863385;SGB=111.067;VDB=0.439541;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN2684-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN2684-S SNP C -> T AC=2;AN=200;BQB=0.981904;DP=4804;DP4=2517,2037,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.61205e-28;MQSB=0.988902;RPB=0.775207;SGB=215.445;VDB=0.97182;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN3552-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN3552-S SNP C -> T AC=2;AN=188;BQB=0.978306;DP=2965;DP4=1689,1184,18,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.13414e-18;MQSB=0.969404;RPB=0.890108;SGB=135.302;VDB=0.758394;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN3782-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN3782-S SNP C -> T AC=2;AN=190;BQB=0.958329;DP=2903;DP4=1653,1133,15,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.30631e-10;MQSB=0.928203;RPB=0.443079;SGB=80.9724;VDB=0.247169;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN3981-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN3981-S SNP C -> T AC=2;AN=168;BQB=0.634058;DP=2606;DP4=1428,1059,18,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.55516e-13;MQSB=0.994688;RPB=0.961056;SGB=86.2102;VDB=0.87191;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN4141-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.946596;DP=2379;DP4=1312,997,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.38201e-07;MQSB=0.98291;RPB=0.36751;SGB=38.987;VDB=0.757013;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W347*|501|LOC_Os04g06010|protein_coding|CODING|LOC_Os04g06010.1|6|1);LOF=(LOC_Os04g06010|LOC_Os04g06010|1|1.00);NMD=(LOC_Os04g06010|LOC_Os04g06010|1|1.00) FN576-S.SNP.4:3116779 chr04:003116779 0 W/3116779-3116779 FN576-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3714-S.SNP.4:3120940 chr04:003120940 0 W/3120940-3120940 FN3714-S SNP T -> G AC=2;AN=190;BQB=0.535489;DP=2726;DP4=1257,1312,20,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000733676;MQB=3.17577e-23;MQSB=0.929141;RPB=0.890193;SGB=150.697;VDB=0.894413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.4:3126498 chr04:003126498 0 W/3126498-3126498 FN3721-S SNP G -> C AC=1;AN=190;BQB=0.998982;DP=3305;DP4=1468,1691,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0299546;MQB=0.000202439;MQSB=0.00025623;RPB=0.627672;SGB=80.9724;VDB=0.381035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A475G|722|LOC_Os04g06030|protein_coding|CODING|LOC_Os04g06030.1|2|1) FN-144.SNP.4:3126619 chr04:003126619 0 W/3126619-3126619 FN-144 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g06030 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3525-S.SNP.4:3128352 chr04:003128352 0 W/3128352-3128352 FN3525-S SNP T -> C AC=1;AN=188;BQB=0.967258;DP=2886;DP4=1297,1514,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000693001;MQB=9.57447e-07;MQSB=0.830474;RPB=0.923509;SGB=32.441;VDB=0.25715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N115D|722|LOC_Os04g06030|protein_coding|CODING|LOC_Os04g06030.1|1|1) FN2392.SNP.4:3130704 chr04:003130704 0 W/3130704-3130704 FN2392 SNP G -> A AC=1;AN=198;BQB=0.939236;DP=4650;DP4=1981,2395,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.80102e-09;MQSB=0.657311;RPB=0.273089;SGB=40.2696;VDB=0.135972;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.4:3135844 chr04:003135844 0 W/3135844-3135844 FN984-S Single Base Substitution G-A INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3978-S.SNP.4:3137515 chr04:003137515 0 W/3137515-3137515 FN3978-S SNP A -> T AC=1;AN=168;BQB=0.655034;DP=2782;DP4=1295,1353,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.40332e-06;MQSB=0.905724;RPB=0.0717684;SGB=41.6096;VDB=0.59901;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.4:3142329 chr04:003142329 0 W/3142329-3142329 FN1337-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2620-S.SNP.4:3142730 chr04:003142730 0 W/3142730-3142730 FN2620-S SNP A -> G AC=1;AN=186;BQB=0.965277;DP=3998;DP4=2010,1757,17,13;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.96462e-14;MQSB=0.999279;RPB=0.420891;SGB=28.4908;VDB=0.0233604;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.4:3143018 chr04:003143018 0 W/3143018-3143018 FN1007-S Single Base Substitution T-C INTERGENIC HOMO SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN3778-S.SNP.4:3144301 chr04:003144301 0 W/3144301-3144301 FN3778-S SNP A -> T AC=1;AN=190;BQB=0.915663;DP=2787;DP4=1330,1371,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.20788e-11;MQSB=0.841591;RPB=0.772377;SGB=90.0802;VDB=0.645443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.4:3145368 chr04:003145368 0 W/3145368-3145368 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.790966;DP=4968;DP4=2115,2601,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.64825e-08;MQSB=0.790221;RPB=0.382111;SGB=21.1058;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.4:3149355 chr04:003149355 0 W/3149355-3149355 FN1061-S Single Base Substitution A-C INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-245.SNP.4:3154752 chr04:003154752 0 W/3154752-3154752 FN-245 Single Base Substitution G-T INTRON HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3422-S.SNP.4:3157917 chr04:003157917 0 W/3157917-3157917 FN3422-S SNP C -> T AC=2;AN=184;BQB=0.979853;DP=3389;DP4=1701,1591,15,12;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.044851;MQB=0.00163798;MQSB=0.152147;RPB=0.827925;SGB=116.569;VDB=0.922492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R5C|1447|LOC_Os04g06080|protein_coding|CODING|LOC_Os04g06080.1|1|1) FN3760-S.SNP.4:3157917 chr04:003157917 0 W/3157917-3157917 FN3760-S SNP C -> T AC=1;AN=190;BQB=0.99899;DP=3279;DP4=1667,1523,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0387313;MQB=0.0141824;MQSB=0.931978;RPB=0.789983;SGB=26.2136;VDB=0.668172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R5C|1447|LOC_Os04g06080|protein_coding|CODING|LOC_Os04g06080.1|1|1) FN3714-S.SNP.4:3158188 chr04:003158188 0 W/3158188-3158188 FN3714-S SNP G -> A AC=2;AN=190;BQB=0.77681;DP=3050;DP4=1397,1531,30,17;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0563934;MQB=0.138724;MQSB=0.00374319;RPB=0.988668;SGB=174.934;VDB=0.651212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C95Y|1447|LOC_Os04g06080|protein_coding|CODING|LOC_Os04g06080.1|1|1) FN2304.SNP.4:3168544 chr04:003168544 0 W/3168544-3168544 FN2304 SNP G -> A AC=1;AN=192;BQB=0.370262;DP=4843;DP4=2074,2507,23,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61411e-21;MQSB=0.983087;RPB=0.985975;SGB=43.3348;VDB=0.218073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L195F|322|LOC_Os04g06100|protein_coding|CODING|LOC_Os04g06100.1|4|1) FN2086-S.SNP.4:3172777 chr04:003172777 0 W/3172777-3172777 FN2086-S SNP G -> A AC=1;AN=168;BQB=0.227591;DP=2675;DP4=1386,1234,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.46932e-08;MQSB=0.112328;RPB=0.568539;SGB=-40.0741;VDB=0.34955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A1118V|1287|LOC_Os04g06110|protein_coding|CODING|LOC_Os04g06110.1|5|1) FN3941-S.SNP.4:3176805 chr04:003176805 0 W/3176805-3176805 FN3941-S SNP G -> C AC=2;AN=168;BQB=0.752355;DP=2863;DP4=1417,1313,14,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000349284;MQB=5.85649e-15;MQSB=0.459384;RPB=0.998718;SGB=82.7794;VDB=0.203666;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:3177724 chr04:003177724 0 W/3177724-3177724 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN760-S.SNP.4:3182909 chr04:003182909 0 W/3182909-3182909 FN760-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g06120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN867-S.SNP.4:3184435 chr04:003184435 0 W/3184435-3184435 FN867-S Single Base Substitution C-T INTERGENIC HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN509-S.SNP.4:3192493 chr04:003192493 0 W/3192493-3192493 FN509-S Single Base Substitution G-A INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1108-S.SNP.4:3193149 chr04:003193149 0 W/3193149-3193149 FN1108-S Single Base Substitution C-G INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN4240-S.SNP.4:3194395 chr04:003194395 0 W/3194395-3194395 FN4240-S SNP A -> T AC=2;AN=170;BQB=0.722355;DP=2342;DP4=1287,854,14,7;HOB=0.0232526;ICB=0.494188;MQ=32;MQ0F=0.171648;MQB=0.91868;MQSB=1.66964e-21;RPB=0.51304;SGB=36.9825;VDB=0.577706;EFF=INTRON(MODIFIER||||2063|LOC_Os04g06144|protein_coding|CODING|LOC_Os04g06144.1|7|1) FN1261-S.SNP.4:3195184 chr04:003195184 0 W/3195184-3195184 FN1261-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g06144 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3663-S.SNP.4:3196971 chr04:003196971 0 W/3196971-3196971 FN3663-S SNP T -> C AC=1;AN=190;BQB=0.987173;DP=2766;DP4=1294,1227,6,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000361533;MQB=5.87201e-12;MQSB=0.112357;RPB=0.359855;SGB=-11.5603;VDB=0.0114308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T1440A|2063|LOC_Os04g06144|protein_coding|CODING|LOC_Os04g06144.1|5|1) FN2489.SNP.4:3204424 chr04:003204424 0 W/3204424-3204424 FN2489 SNP T -> C AC=1;AN=198;BQB=0.956842;DP=4659;DP4=2219,2109,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.44457e-05;MQSB=0.965942;RPB=0.247551;SGB=-11.2947;VDB=0.937444;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K553R|2063|LOC_Os04g06144|protein_coding|CODING|LOC_Os04g06144.1|1|1) FN1321-S.SNP.4:3204428 chr04:003204428 0 W/3204428-3204428 FN1321-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g06144 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3834-S.SNP.4:3207302 chr04:003207302 0 W/3207302-3207302 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.912734;DP=3200;DP4=1565,1518,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.02375;MQB=0.918972;MQSB=2.03255e-05;RPB=0.868317;SGB=46.7622;VDB=0.146124;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L287|316|LOC_Os04g06160|protein_coding|CODING|LOC_Os04g06160.1|1|1) FN-380.SNP.4:3208522 chr04:003208522 0 W/3208522-3208522 FN-380 Single Base Substitution G-C INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3832-S.SNP.4:3211450 chr04:003211450 0 W/3211450-3211450 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.99667;DP=2899;DP4=1308,1455,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77754e-06;MQSB=0.994638;RPB=0.715931;SGB=53.6492;VDB=0.265303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.4:3211659 chr04:003211659 0 W/3211659-3211659 FN2142-S SNP T -> C AC=1;AN=168;BQB=0.549289;DP=2990;DP4=1745,1217,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.00257774;MQSB=0.086249;RPB=0.699075;SGB=-17.0958;VDB=0.604518;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.4:3219949 chr04:003219949 0 W/3219949-3219949 FN-215 Single Base Substitution G-C INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-173.SNP.4:3220134 chr04:003220134 0 W/3220134-3220134 FN-173 Single Base Substitution A-T INTERGENIC HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. W472-5-1.SNP.4:3222381 chr04:003222381 0 W/3222381-3222381 W472-5-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g06200 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN759-S.SNP.4:3228622 chr04:003228622 0 W/3228622-3228622 FN759-S Single Base Substitution T-C INTRON HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN3295-S.SNP.4:3231270 chr04:003231270 0 W/3231270-3231270 FN3295-S SNP C -> G AC=1;AN=184;BQB=0.999071;DP=3395;DP4=1411,1885,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.1681e-08;MQSB=0.830153;RPB=0.698874;SGB=66.8296;VDB=0.97304;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.4:3264755 chr04:003264755 0 W/3264755-3264755 FN_829-2-5 Single Base Substitution G-A HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3935-S.SNP.4:3268099 chr04:003268099 0 W/3268099-3268099 FN3935-S SNP T -> C AC=1;AN=158;BQB=0.958763;DP=2627;DP4=1047,1420,9,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.43015e-14;MQSB=0.977985;RPB=0.989084;SGB=95.131;VDB=0.129441;EFF=INTRON(MODIFIER||||890|LOC_Os04g06280|protein_coding|CODING|LOC_Os04g06280.1|5|1) FN2337.SNP.4:3269700 chr04:003269700 0 W/3269700-3269700 FN2337 SNP G -> C AC=1;AN=192;BQB=0.990712;DP=4805;DP4=2268,2279,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.52458e-06;MQSB=0.999968;RPB=0.356722;SGB=-2.03126;VDB=0.16077;EFF=INTRON(MODIFIER||||890|LOC_Os04g06280|protein_coding|CODING|LOC_Os04g06280.1|6|1) FN762-S.SNP.4:3270869 chr04:003270869 0 W/3270869-3270869 FN762-S Single Base Substitution T-C INTRON HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2611-S.SNP.4:3270944 chr04:003270944 0 W/3270944-3270944 FN2611-S SNP G -> C AC=1;AN=200;BQB=0.317531;DP=4915;DP4=2251,2308,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3726e-11;MQSB=0.963837;RPB=0.914374;SGB=72.6852;VDB=0.397502;EFF=INTRON(MODIFIER||||890|LOC_Os04g06280|protein_coding|CODING|LOC_Os04g06280.1|7|1) FN2204-S.SNP.4:3272975 chr04:003272975 0 W/3272975-3272975 FN2204-S SNP A -> G AC=1;AN=190;BQB=0.997973;DP=5037;DP4=2610,2149,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.12419e-19;MQSB=0.981188;RPB=0.928238;SGB=107.178;VDB=0.89137;EFF=INTRON(MODIFIER||||890|LOC_Os04g06280|protein_coding|CODING|LOC_Os04g06280.1|8|1) FN1585-S.SNP.4:3280551 chr04:003280551 0 W/3280551-3280551 FN1585-S Single Base Substitution G-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2606-S.SNP.4:3282067 chr04:003282067 0 W/3282067-3282067 FN2606-S SNP T -> C AC=1;AN=186;BQB=0.842189;DP=3952;DP4=1779,1979,3,4;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.49855e-05;MQSB=0.947647;RPB=0.878421;SGB=26.5745;VDB=0.528186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.4:3282652 chr04:003282652 0 W/3282652-3282652 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.317135;DP=2981;DP4=1315,1513,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42307e-11;MQSB=0.999864;RPB=0.991159;SGB=71.3514;VDB=0.597848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.4:3282657 chr04:003282657 0 W/3282657-3282657 FN3286-S SNP C -> A AC=1;AN=184;BQB=0.999336;DP=2977;DP4=1336,1549,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36888e-11;MQSB=0.999954;RPB=0.965556;SGB=49.835;VDB=0.361626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.4:3283650 chr04:003283650 0 W/3283650-3283650 FN3342-S SNP T -> C AC=1;AN=184;BQB=0.796455;DP=2487;DP4=1207,1187,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36318e-07;MQSB=0.924014;RPB=0.850533;SGB=35.7479;VDB=0.24956;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.4:3288061 chr04:003288061 0 W/3288061-3288061 FN1292-S Single Base Substitution T-G INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3801-S.SNP.4:3290068 chr04:003290068 0 W/3290068-3290068 FN3801-S SNP G -> A AC=1;AN=190;BQB=0.983645;DP=2773;DP4=1333,1329,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.53788e-10;MQSB=0.951689;RPB=0.349622;SGB=67.3108;VDB=0.950182;EFF=INTRON(MODIFIER||||765|LOC_Os04g06290|protein_coding|CODING|LOC_Os04g06290.1|2|1) FN1106-S.SNP.4:3290752 chr04:003290752 0 W/3290752-3290752 FN1106-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g06290 retrotransposon protein, putative, unclassified, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN751-S.SNP.4:3291499 chr04:003291499 0 W/3291499-3291499 FN751-S Single Base Substitution A-G INTRON HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3607-S.SNP.4:3292769 chr04:003292769 0 W/3292769-3292769 FN3607-S SNP T -> C AC=2;AN=190;BQB=0.917731;DP=2811;DP4=1406,1330,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43683e-16;MQSB=0.99949;RPB=0.996761;SGB=112.85;VDB=0.17899;EFF=INTRON(MODIFIER||||765|LOC_Os04g06290|protein_coding|CODING|LOC_Os04g06290.1|5|1) FN3358-S.SNP.4:3296796 chr04:003296796 0 W/3296796-3296796 FN3358-S SNP C -> G AC=1;AN=184;BQB=0.928355;DP=2941;DP4=1469,1391,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32533e-09;MQSB=0.905428;RPB=0.637627;SGB=80.3949;VDB=0.585518;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E523Q|756|LOC_Os04g06300|protein_coding|CODING|LOC_Os04g06300.1|2|1) FN-115.SNP.4:3298721 chr04:003298721 0 W/3298721-3298721 FN-115 Single Base Substitution A-C INTRON HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2430.SNP.4:3300431 chr04:003300431 0 W/3300431-3300431 FN2430 SNP G -> A AC=2;AN=198;BQB=0.995765;DP=4819;DP4=2536,1964,28,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.75483e-22;MQSB=4.08993e-14;RPB=0.931223;SGB=238.471;VDB=0.130235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.4:3301668 chr04:003301668 0 W/3301668-3301668 FN-241 Single Base Substitution A-G INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2318.SNP.4:3305851 chr04:003305851 0 W/3305851-3305851 FN2318 SNP G -> A AC=1;AN=192;BQB=0.752318;DP=4864;DP4=2450,2128,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.43173e-11;MQSB=0.190187;RPB=0.513642;SGB=57.6018;VDB=0.231224;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.4:3306232 chr04:003306232 0 W/3306232-3306232 FN4116-S SNP T -> A AC=1;AN=182;BQB=0.928832;DP=2818;DP4=1321,1349,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.23538e-07;MQSB=0.999066;RPB=0.910804;SGB=28.6061;VDB=0.898619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E151D|158|LOC_Os04g06320|protein_coding|CODING|LOC_Os04g06320.1|3|1) FN1719-S.SNP.4:3307334 chr04:003307334 0 W/3307334-3307334 FN1719-S SNP A -> T AC=1;AN=188;BQB=0.241036;DP=2881;DP4=1348,1438,8,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26153e-08;MQSB=0.943692;RPB=0.990268;SGB=-39.6481;VDB=0.455787;EFF=INTRON(MODIFIER||||158|LOC_Os04g06320|protein_coding|CODING|LOC_Os04g06320.1|1|1) FN1466-S.SNP.4:3319164 chr04:003319164 0 W/3319164-3319164 FN1466-S Single Base Substitution A-T INTRON Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3757-S.SNP.4:3320619 chr04:003320619 0 W/3320619-3320619 FN3757-S SNP T -> A AC=1;AN=190;BQB=0.995163;DP=2477;DP4=1211,1179,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000403714;MQB=1.23127e-06;MQSB=0.958044;RPB=0.922668;SGB=49.0954;VDB=0.250674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M492K|1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|6|1) FN3296-S.SNP.4:3321127 chr04:003321127 0 W/3321127-3321127 FN3296-S SNP G -> A AC=1;AN=184;BQB=0.67078;DP=2891;DP4=1325,1468,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000345901;MQB=1.75636e-05;MQSB=0.922991;RPB=0.916922;SGB=10.6662;VDB=0.665828;EFF=INTRON(MODIFIER||||1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|6|1) FN-240.SNP.4:3323264 chr04:003323264 0 W/3323264-3323264 FN-240 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g06360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1257-S.SNP.4:3323264 chr04:003323264 0 W/3323264-3323264 FN1257-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g06360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2390.SNP.4:3323481 chr04:003323481 0 W/3323481-3323481 FN2390 SNP G -> T AC=1;AN=200;BQB=0.966523;DP=5148;DP4=2313,2330,277,23;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0578866;MQB=0;MQSB=5.37034e-41;RPB=0.601143;SGB=-3559.75;VDB=1.03176e-28;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E1190*|1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|9|1);LOF=(LOC_Os04g06360|LOC_Os04g06360|1|1.00);NMD=(LOC_Os04g06360|LOC_Os04g06360|1|1.00) FN3520-S.SNP.4:3323502 chr04:003323502 0 W/3323502-3323502 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.980236;DP=2968;DP4=1530,1375,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0505391;MQB=0.446896;MQSB=1.3244e-09;RPB=0.993272;SGB=28.6195;VDB=0.69939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1197I|1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|9|1) FN2611-S.SNP.4:3323806 chr04:003323806 0 W/3323806-3323806 FN2611-S SNP C -> G AC=1;AN=200;BQB=0.845388;DP=5354;DP4=2792,2247,19,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00298842;MQB=1.5265e-10;MQSB=0.287703;RPB=0.740659;SGB=25.5416;VDB=0.909846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S1298C|1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|9|1) FN3932-S.SNP.4:3325509 chr04:003325509 0 W/3325509-3325509 FN3932-S SNP C -> G AC=1;AN=158;BQB=0.681614;DP=2369;DP4=1275,1016,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000422119;MQB=2.05673e-05;MQSB=0.121166;RPB=0.951293;SGB=23.9652;VDB=0.705724;EFF=INTRON(MODIFIER||||1645|LOC_Os04g06360|protein_coding|CODING|LOC_Os04g06360.1|11|1) FN1256-S.SNP.4:3327306 chr04:003327306 0 W/3327306-3327306 FN1256-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1639-S.SNP.4:3340129 chr04:003340129 0 W/3340129-3340129 FN1639-S Single Base Substitution G-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3872-S.SNP.4:3346518 chr04:003346518 0 W/3346518-3346518 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.842283;DP=2071;DP4=1019,974,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0791888;MQB=0.666539;MQSB=1.00551e-07;RPB=0.9954;SGB=47.0672;VDB=0.332435;EFF=INTRON(MODIFIER||||561|LOC_Os04g06420|protein_coding|CODING|LOC_Os04g06420.1|3|1) FN2204-S.SNP.4:3346791 chr04:003346791 0 W/3346791-3346791 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.633097;DP=5104;DP4=2141,2568,11,17;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.283895;MQB=0.440198;MQSB=0;RPB=0.975033;SGB=56.8601;VDB=0.36175;EFF=INTRON(MODIFIER||||561|LOC_Os04g06420|protein_coding|CODING|LOC_Os04g06420.1|3|1) FN3979-S.SNP.4:3348562 chr04:003348562 0 W/3348562-3348562 FN3979-S SNP T -> A AC=1;AN=168;BQB=0.514323;DP=3248;DP4=1719,1401,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.363301;MQB=0.859301;MQSB=0;RPB=0.400877;SGB=12.7756;VDB=0.574208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E442V|561|LOC_Os04g06420|protein_coding|CODING|LOC_Os04g06420.1|2|1) FN3979-S.SNP.4:3348563 chr04:003348563 0 W/3348563-3348563 FN3979-S SNP C -> A AC=1;AN=168;BQB=0.854641;DP=3242;DP4=1737,1387,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.363356;MQB=0.603484;MQSB=0;RPB=0.621814;SGB=74.3269;VDB=0.544883;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E442*|561|LOC_Os04g06420|protein_coding|CODING|LOC_Os04g06420.1|2|1);LOF=(LOC_Os04g06420|LOC_Os04g06420|1|1.00);NMD=(LOC_Os04g06420|LOC_Os04g06420|1|1.00) FN3422-S.SNP.4:3356652 chr04:003356652 0 W/3356652-3356652 FN3422-S SNP C -> A AC=1;AN=184;BQB=0.997559;DP=2954;DP4=1410,1445,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00372376;MQB=0.00221752;MQSB=0.0492381;RPB=0.554663;SGB=44.2207;VDB=0.560105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.4:3357340 chr04:003357340 0 W/3357340-3357340 FN2574-S SNP A -> T AC=1;AN=188;BQB=0.905145;DP=3833;DP4=1949,1601,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.0033916;MQB=0.00359218;MQSB=1.55954e-05;RPB=0.202234;SGB=22.1736;VDB=0.18406;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.4:3362794 chr04:003362794 0 W/3362794-3362794 W607-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN549-S.SNP.4:3381858 chr04:003381858 0 W/3381858-3381858 FN549-S Single Base Substitution G-A INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2333.SNP.4:3384925 chr04:003384925 0 W/3384925-3384925 FN2333 SNP C -> T AC=1;AN=192;BQB=0.925431;DP=6007;DP4=3094,2613,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0329615;MQB=0.542825;MQSB=2.06673e-17;RPB=0.650119;SGB=39.78;VDB=0.643937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A321V|449|LOC_Os04g06390|protein_coding|CODING|LOC_Os04g06390.1|1|1) FN3492-S.SNP.4:3396834 chr04:003396834 0 W/3396834-3396834 FN3492-S SNP T -> C AC=1;AN=184;BQB=0.995773;DP=2910;DP4=1466,1345,19,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=8.27052e-10;MQSB=0.878932;RPB=0.36706;SGB=102.662;VDB=0.170917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.4:3398560 chr04:003398560 0 W/3398560-3398560 FN1255-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2450.SNP.4:3398911 chr04:003398911 0 W/3398911-3398911 FN2450 SNP G -> A AC=1;AN=200;BQB=0.999964;DP=4271;DP4=1731,2255,7,13;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0543198;MQB=0.999958;MQSB=8.12619e-34;RPB=0.666802;SGB=12.7003;VDB=0.481389;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.4:3399039 chr04:003399039 0 W/3399039-3399039 FN2184-S SNP A -> T AC=1;AN=190;BQB=0.728766;DP=3824;DP4=1286,2304,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0457636;MQB=0.921556;MQSB=0;RPB=0.920627;SGB=43.2083;VDB=0.33973;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.4:3419820 chr04:003419820 0 W/3419820-3419820 FN417-S Single Base Substitution C-G INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN4177-S.SNP.4:3425831 chr04:003425831 0 W/3425831-3425831 FN4177-S SNP A -> T AC=1;AN=170;BQB=0.539833;DP=2558;DP4=1179,1227,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000535124;MQSB=0.999216;RPB=0.999736;SGB=34.5445;VDB=0.890922;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I318N|772|LOC_Os04g06500|protein_coding|CODING|LOC_Os04g06500.1|2|1) FN988-S.SNP.4:3428994 chr04:003428994 0 W/3428994-3428994 FN988-S Single Base Substitution C-T INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2378.SNP.4:3433104 chr04:003433104 0 W/3433104-3433104 FN2378 SNP G -> A AC=1;AN=192;BQB=0.316217;DP=4749;DP4=2127,2307,18,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.1747e-15;MQSB=0.838559;RPB=0.436486;SGB=82.5522;VDB=0.891348;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.4:3435206 chr04:003435206 0 W/3435206-3435206 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3865-S.SNP.4:3436141 chr04:003436141 0 W/3436141-3436141 FN3865-S SNP C -> T AC=1;AN=158;BQB=0.962321;DP=2262;DP4=1072,1104,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.7355e-06;MQSB=0.971922;RPB=0.758713;SGB=-3.39162;VDB=0.274778;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.4:3439630 chr04:003439630 0 W/3439630-3439630 FN503-S Single Base Substitution C-A INTERGENIC HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN3559-S.SNP.4:3444022 chr04:003444022 0 W/3444022-3444022 FN3559-S SNP G -> A AC=2;AN=188;BQB=0.119642;DP=4170;DP4=2000,2046,30,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.10217e-18;MQSB=0.207328;RPB=0.592904;SGB=221.624;VDB=0.909458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.4:3446204 chr04:003446204 0 W/3446204-3446204 FN3967-S SNP T -> G AC=1;AN=182;BQB=0.669181;DP=2592;DP4=1072,1435,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.28495e-11;MQSB=0.990512;RPB=0.604846;SGB=67.2255;VDB=0.823201;EFF=INTRON(MODIFIER||||334|LOC_Os04g06550|protein_coding|CODING|LOC_Os04g06550.1|1|1) FN2551-S.SNP.4:3447502 chr04:003447502 0 W/3447502-3447502 FN2551-S SNP C -> A AC=1;AN=186;BQB=0.789395;DP=3851;DP4=1946,1709,14,10;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=3.35011e-10;MQSB=0.0311914;RPB=0.592687;SGB=-9.66994;VDB=0.547654;EFF=INTRON(MODIFIER||||334|LOC_Os04g06550|protein_coding|CODING|LOC_Os04g06550.1|2|1) FN-207.SNP.4:3448741 chr04:003448741 0 W/3448741-3448741 FN-207 Single Base Substitution G-A INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN4114-S.SNP.4:3448741 chr04:003448741 0 W/3448741-3448741 FN4114-S SNP G -> A AC=2;AN=182;BQB=0.601268;DP=3205;DP4=1737,1377,19,18;HOB=0.0217365;ICB=0.494567;MQ=40;MQ0F=0.0349454;MQB=0.0889318;MQSB=0.250906;RPB=0.978997;SGB=161.394;VDB=0.351824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.4:3449784 chr04:003449784 0 W/3449784-3449784 FN1109-S Single Base Substitution T-C INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4081-S.SNP.4:3450458 chr04:003450458 0 W/3450458-3450458 FN4081-S SNP A -> G AC=2;AN=182;BQB=0.937081;DP=2957;DP4=1387,1486,13,18;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=5.94662e-16;MQSB=0.378625;RPB=0.986954;SGB=134.329;VDB=0.412963;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.4:3453203 chr04:003453203 0 W/3453203-3453203 FN547-S Single Base Substitution G-A INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2268-S.SNP.4:3456454 chr04:003456454 0 W/3456454-3456454 FN2268-S SNP C -> G AC=1;AN=190;BQB=0.967968;DP=4626;DP4=2086,2176,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.075227;MQB=0.620713;MQSB=0.491431;RPB=0.978338;SGB=41.5369;VDB=0.24087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.4:3457779 chr04:003457779 0 W/3457779-3457779 FN1231-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN2352.SNP.4:3467478 chr04:003467478 0 W/3467478-3467478 FN2352 SNP T -> C AC=2;AN=192;BQB=0.984881;DP=4915;DP4=1970,2586,14,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.02126e-20;MQSB=0.982537;RPB=0.948948;SGB=118.196;VDB=0.152294;EFF=INTRON(MODIFIER||||751|LOC_Os04g06590|protein_coding|CODING|LOC_Os04g06590.1|1|1) FN318-S.SNP.4:3480403 chr04:003480403 0 W/3480403-3480403 FN318-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g06600 retrotransposon protein, putative, unclassified, expressed SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN491-S.SNP.4:3485399 chr04:003485399 0 W/3485399-3485399 FN491-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g06610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN1003-S.SNP.4:3485801 chr04:003485801 0 W/3485801-3485801 FN1003-S Single Base Substitution C-T INTRON HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN4031-S.SNP.4:3486537 chr04:003486537 0 W/3486537-3486537 FN4031-S SNP A -> T AC=1;AN=168;BQB=0.0787115;DP=2360;DP4=1437,786,14,4;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0131356;MQB=0.961517;MQSB=0.117055;RPB=0.915137;SGB=74.3269;VDB=0.934531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.4:3490289 chr04:003490289 0 W/3490289-3490289 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN669-S.SNP.4:3490779 chr04:003490779 0 W/3490779-3490779 FN669-S Single Base Substitution T-G INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1745-S.SNP.4:3513493 chr04:003513493 0 W/3513493-3513493 FN1745-S SNP A -> T AC=1;AN=188;BQB=0.995321;DP=2289;DP4=1179,1081,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=11;MQ0F=0.50415;MQB=0.00496412;MQSB=0;RPB=0.996343;SGB=48.979;VDB=0.428358;EFF=INTERGENIC(MODIFIER||||||||||1) FN932-S.SNP.4:3515261 chr04:003515261 0 W/3515261-3515261 FN932-S Single Base Substitution C-T INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2533-S.SNP.4:3528276 chr04:003528276 0 W/3528276-3528276 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.987737;DP=4194;DP4=2005,1964,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.74173e-08;MQSB=0.996396;RPB=0.585384;SGB=67.9293;VDB=0.0870779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.4:3529705 chr04:003529705 0 W/3529705-3529705 FN3707-S SNP G -> T AC=1;AN=190;BQB=0.757145;DP=2988;DP4=1388,1460,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.14289e-05;MQSB=0.758566;RPB=0.618991;SGB=35.4339;VDB=0.697669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.4:3539292 chr04:003539292 0 W/3539292-3539292 FN3345-S SNP G -> T AC=1;AN=184;BQB=0.992742;DP=2955;DP4=1615,1226,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5334e-11;MQSB=0.449525;RPB=0.643748;SGB=80.3949;VDB=0.200672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.4:3545381 chr04:003545381 0 W/3545381-3545381 FN4260-S SNP T -> G AC=2;AN=170;BQB=0.830491;DP=2189;DP4=975,1008,22,15;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=9.96575e-15;MQSB=0.0241737;RPB=0.931176;SGB=85.4342;VDB=0.59066;EFF=INTRON(MODIFIER||||366|LOC_Os04g06734|protein_coding|CODING|LOC_Os04g06734.1|7|1) FN2431.SNP.4:3548229 chr04:003548229 0 W/3548229-3548229 FN2431 SNP A -> T AC=1;AN=200;BQB=0.135561;DP=4780;DP4=2311,2082,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.53341e-09;MQSB=0.462412;RPB=0.523178;SGB=-36.8949;VDB=0.780315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.4:3548792 chr04:003548792 0 W/3548792-3548792 FN2198-S SNP C -> T AC=2;AN=190;BQB=0.831984;DP=4378;DP4=1900,1983,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.23998e-16;MQSB=0.999928;RPB=0.834731;SGB=24.3115;VDB=0.240576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.4:3548793 chr04:003548793 0 W/3548793-3548793 FN2198-S SNP C -> A AC=2;AN=190;BQB=0.939007;DP=4378;DP4=1908,2134,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.94463e-16;MQSB=0.858934;RPB=0.998505;SGB=92.9626;VDB=0.317633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.4:3556207 chr04:003556207 0 W/3556207-3556207 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.992542;DP=2539;DP4=1232,1183,5,17;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.17654e-11;MQSB=0.671966;RPB=0.619721;SGB=90.7616;VDB=0.842834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G812R|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.1|21|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G812R|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.2|21|1),SPLICE_SITE_REGION(LOW||||911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.1|21|1),SPLICE_SITE_REGION(LOW||||911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.2|21|1) FN3758-S.SNP.4:3560657 chr04:003560657 0 W/3560657-3560657 FN3758-S SNP G -> A AC=1;AN=190;BQB=0.86798;DP=2630;DP4=1286,1260,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7035e-06;MQSB=0.773855;RPB=0.0642494;SGB=62.7569;VDB=0.00671714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P38L|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P38L|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.2|2|1) FN4121-S.SNP.4:3560657 chr04:003560657 0 W/3560657-3560657 FN4121-S SNP G -> A AC=2;AN=182;BQB=0.698174;DP=2857;DP4=1479,1317,15,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.4953e-08;MQSB=0.445704;RPB=0.359861;SGB=80.1982;VDB=0.455559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P38L|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P38L|911|LOC_Os04g06770|protein_coding|CODING|LOC_Os04g06770.2|2|1) W577-3-1.SNP.4:3561243 chr04:003561243 0 W/3561243-3561243 W577-3-1 Single Base Substitution G-A INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. W577-3-1.SNP.4:3561244 chr04:003561244 0 W/3561244-3561244 W577-3-1 Single Base Substitution C-A INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. W577-3-1.SNP.4:3561245 chr04:003561245 0 W/3561245-3561245 W577-3-1 Single Base Substitution A-T INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3698-S.SNP.4:3565654 chr04:003565654 0 W/3565654-3565654 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.87093;DP=2504;DP4=1113,1309,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40431e-05;MQSB=0.0218349;RPB=0.928754;SGB=39.9877;VDB=0.906563;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G31D|106|LOC_Os04g06780|protein_coding|CODING|LOC_Os04g06780.1|1|1) FN3613-S.SNP.4:3567952 chr04:003567952 0 W/3567952-3567952 FN3613-S SNP T -> A AC=2;AN=190;BQB=0.784415;DP=2304;DP4=1447,741,24,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.58891e-20;MQSB=0.192755;RPB=0.368156;SGB=149.281;VDB=0.205838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.4:3567953 chr04:003567953 0 W/3567953-3567953 FN3613-S SNP G -> A AC=2;AN=190;BQB=0.630928;DP=2307;DP4=1446,762,25,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=5.07917e-21;MQSB=0.0749273;RPB=0.375117;SGB=126.607;VDB=0.189912;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.4:3574889 chr04:003574889 0 W/3574889-3574889 FN1366-S Single Base Substitution A-G INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3563-S.SNP.4:3579072 chr04:003579072 0 W/3579072-3579072 FN3563-S SNP G -> A AC=2;AN=188;BQB=0.994985;DP=2308;DP4=1025,1212,9,7;HOB=0.0210502;ICB=0.494738;MQ=31;MQ0F=0;MQB=0.981906;MQSB=0.213691;RPB=0.099232;SGB=67.1521;VDB=0.000191562;EFF=UTR_5_PRIME(MODIFIER||217||249|LOC_Os04g06790|protein_coding|CODING|LOC_Os04g06790.1|2|1),INTRON(MODIFIER||||249|LOC_Os04g06790|protein_coding|CODING|LOC_Os04g06790.2|2|1),INTRON(MODIFIER||||210|LOC_Os04g06790|protein_coding|CODING|LOC_Os04g06790.3|2|1) FN475-S.SNP.4:3587908 chr04:003587908 0 W/3587908-3587908 FN475-S Single Base Substitution C-T INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1554-S.SNP.4:3628621 chr04:003628621 0 W/3628621-3628621 FN1554-S Single Base Substitution T-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3440-S.SNP.4:3629176 chr04:003629176 0 W/3629176-3629176 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.94092;DP=2948;DP4=1440,1399,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.000339213;MQB=1.60915e-06;MQSB=0.641943;RPB=0.479487;SGB=49.835;VDB=0.391324;EFF=INTRON(MODIFIER||||77|LOC_Os04g06879|protein_coding|CODING|LOC_Os04g06879.1|1|1) FN-285.SNP.4:3652828 chr04:003652828 0 W/3652828-3652828 FN-285 Single Base Substitution C-T INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN671-S.SNP.4:3657133 chr04:003657133 0 W/3657133-3657133 FN671-S Single Base Substitution A-G INTRON HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1186-S.SNP.4:3658761 chr04:003658761 0 W/3658761-3658761 FN1186-S Single Base Substitution C-A INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1115-S.SNP.4:3660265 chr04:003660265 0 W/3660265-3660265 FN1115-S Single Base Substitution G-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2314.SNP.4:3705920 chr04:003705920 0 W/3705920-3705920 FN2314 SNP T -> A AC=1;AN=192;BQB=0.788588;DP=4404;DP4=2224,1852,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61735e-07;MQSB=0.0190983;RPB=0.0935689;SGB=4.22611;VDB=0.43455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.4:3706242 chr04:003706242 0 W/3706242-3706242 FN2411 SNP C -> G AC=1;AN=200;BQB=0.991206;DP=2062;DP4=1021,920,6,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.279836;MQSB=4.9466e-22;RPB=0.00461077;SGB=32.0901;VDB=1.86807e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.4:3709760 chr04:003709760 0 W/3709760-3709760 FN-183 Single Base Substitution C-T INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN463-S.SNP.4:3717298 chr04:003717298 0 W/3717298-3717298 FN463-S Single Base Substitution C-T INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1573-S.SNP.4:3748188 chr04:003748188 0 W/3748188-3748188 FN1573-S Single Base Substitution T-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1123-S.SNP.4:3748349 chr04:003748349 0 W/3748349-3748349 FN1123-S Single Base Substitution T-C INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2445.SNP.4:3748614 chr04:003748614 0 W/3748614-3748614 FN2445 SNP G -> A AC=1;AN=200;BQB=0.467535;DP=4518;DP4=1852,2415,6,14;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.106684;MQB=0.257042;MQSB=0.000525363;RPB=0.0429524;SGB=12.7003;VDB=0.962049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.4:3825208 chr04:003825208 0 W/3825208-3825208 FN1556-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN3050-S.SNP.4:3829422 chr04:003829422 0 W/3829422-3829422 FN3050-S SNP A -> G AC=2;AN=184;BQB=0.694509;DP=2852;DP4=1571,1159,15,12;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0;MQB=0.00036455;MQSB=0.959157;RPB=0.8483;SGB=116.569;VDB=0.610065;EFF=INTRON(MODIFIER||||173|LOC_Os04g07220|protein_coding|CODING|LOC_Os04g07220.1|1|1) FN404-S.SNP.4:3829756 chr04:003829756 0 W/3829756-3829756 FN404-S Single Base Substitution C-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1618-S.SNP.4:3842322 chr04:003842322 0 W/3842322-3842322 FN1618-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g07240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3770-S.SNP.4:3842776 chr04:003842776 0 W/3842776-3842776 FN3770-S SNP G -> A AC=2;AN=190;BQB=0.295493;DP=2810;DP4=1353,1375,10,6;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0;MQB=4.43927e-05;MQSB=0.681094;RPB=0.919865;SGB=67.3108;VDB=0.93824;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q354*|632|LOC_Os04g07240|protein_coding|CODING|LOC_Os04g07240.1|3|1);LOF=(LOC_Os04g07240|LOC_Os04g07240|1|1.00);NMD=(LOC_Os04g07240|LOC_Os04g07240|1|1.00) FN2196-S.SNP.4:3856703 chr04:003856703 0 W/3856703-3856703 FN2196-S SNP C -> T AC=2;AN=190;BQB=0.858417;DP=4485;DP4=1913,2210,26,28;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=4.86881e-21;MQSB=0.750883;RPB=0.617335;SGB=181.81;VDB=0.0684527;EFF=INTRON(MODIFIER||||683|LOC_Os04g07260|protein_coding|CODING|LOC_Os04g07260.1|3|1) FN1025-S.SNP.4:3858854 chr04:003858854 0 W/3858854-3858854 FN1025-S Single Base Substitution A-G INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2625-S.SNP.4:3860178 chr04:003860178 0 W/3860178-3860178 FN2625-S SNP C -> G AC=1;AN=200;BQB=0.83523;DP=5233;DP4=2654,2343,7,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0038219;MQB=1.00156e-05;MQSB=0.437282;RPB=0.897304;SGB=54.6902;VDB=0.555507;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.4:3862490 chr04:003862490 0 W/3862490-3862490 FN729-S Single Base Substitution C-G INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1735-S.SNP.4:3865011 chr04:003865011 0 W/3865011-3865011 FN1735-S SNP C -> A AC=1;AN=188;BQB=0.903874;DP=3839;DP4=1854,1950,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02089e-09;MQSB=0.705217;RPB=0.892423;SGB=11.7114;VDB=0.112489;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.4:3865011 chr04:003865011 0 W/3865011-3865011 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.60574;DP=4569;DP4=2110,2133,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0689e-13;MQSB=0.810751;RPB=0.699945;SGB=104.69;VDB=0.14139;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.4:3884379 chr04:003884379 0 W/3884379-3884379 FN779-S Single Base Substitution A-G INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1025-S.SNP.4:3888174 chr04:003888174 0 W/3888174-3888174 FN1025-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2418.SNP.4:3888899 chr04:003888899 0 W/3888899-3888899 FN2418 SNP A -> C AC=1;AN=200;BQB=0.478469;DP=4598;DP4=1997,2272,3,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0132666;MQB=0.0932127;MQSB=0.00764634;RPB=0.455617;SGB=36.6644;VDB=0.521202;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Ggt|C1276G|1664|LOC_Os04g07320|protein_coding|CODING|LOC_Os04g07320.1|4|1) FN2217-S.SNP.4:3892636 chr04:003892636 0 W/3892636-3892636 FN2217-S SNP G -> A AC=2;AN=190;BQB=0.466913;DP=4532;DP4=1999,2167,15,22;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00463372;MQB=4.16067e-13;MQSB=0.981441;RPB=0.933179;SGB=38.2964;VDB=0.946597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P181L|1664|LOC_Os04g07320|protein_coding|CODING|LOC_Os04g07320.1|3|1) FN1367-S.SNP.4:3903830 chr04:003903830 0 W/3903830-3903830 FN1367-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN-333.SNP.4:3904681 chr04:003904681 0 W/3904681-3904681 FN-333 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g07340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1477-S.SNP.4:3906719 chr04:003906719 0 W/3906719-3906719 FN1477-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2292.SNP.4:3906948 chr04:003906948 0 W/3906948-3906948 FN2292 SNP G -> A AC=1;AN=192;BQB=0.510051;DP=6921;DP4=1992,4630,2,16;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00390117;MQB=0.0466801;MQSB=0.000745279;RPB=0.572727;SGB=31.4783;VDB=0.110124;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A770T|806|LOC_Os04g07340|protein_coding|CODING|LOC_Os04g07340.1|1|1) FN3058-S.SNP.4:3906948 chr04:003906948 0 W/3906948-3906948 FN3058-S SNP G -> A AC=1;AN=184;BQB=0.8641;DP=4184;DP4=1349,2694,23,20;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00573614;MQB=7.81002e-06;MQSB=5.25851e-07;RPB=0.454343;SGB=188.918;VDB=0.996367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A770T|806|LOC_Os04g07340|protein_coding|CODING|LOC_Os04g07340.1|1|1) FN4150-S.SNP.4:3906948 chr04:003906948 0 W/3906948-3906948 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.950697;DP=3488;DP4=1195,2213,12,19;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00688073;MQB=3.36809e-05;MQSB=2.4848e-05;RPB=0.435329;SGB=132.282;VDB=0.51042;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A770T|806|LOC_Os04g07340|protein_coding|CODING|LOC_Os04g07340.1|1|1) FN2281.SNP.4:3927284 chr04:003927284 0 W/3927284-3927284 FN2281 SNP C -> T AC=1;AN=192;BQB=0.953261;DP=3417;DP4=1087,2195,2,21;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.186713;MQB=0.99897;MQSB=0;RPB=0.928035;SGB=71.8591;VDB=0.606292;EFF=INTRON(MODIFIER||||1494|LOC_Os04g07370|protein_coding|CODING|LOC_Os04g07370.1|1|1) FN1492-S.SNP.4:3932240 chr04:003932240 0 W/3932240-3932240 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1527-S.SNP.4:3934835 chr04:003934835 0 W/3934835-3934835 FN1527-S Single Base Substitution G-T INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3472-S.SNP.4:3936467 chr04:003936467 0 W/3936467-3936467 FN3472-S SNP G -> A AC=1;AN=184;BQB=0.939525;DP=1785;DP4=731,870,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0022409;MQB=0.985287;MQSB=2.69382e-21;RPB=0.910919;SGB=25.1826;VDB=0.242987;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.4:3936605 chr04:003936605 0 W/3936605-3936605 FN798-S Single Base Substitution C-T INTERGENIC HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-382.SNP.4:3937447 chr04:003937447 0 W/3937447-3937447 FN-382 Single Base Substitution C-T INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN885-S.SNP.4:3938710 chr04:003938710 0 W/3938710-3938710 FN885-S Single Base Substitution C-T INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3480-S.SNP.4:3940325 chr04:003940325 0 W/3940325-3940325 FN3480-S SNP G -> T AC=2;AN=184;BQB=0.718373;DP=3524;DP4=1497,1873,15,21;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=4.09229e-11;MQSB=1.49102e-05;RPB=0.824074;SGB=116.749;VDB=0.222501;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.4:3942177 chr04:003942177 0 W/3942177-3942177 FN1643-S Single Base Substitution C-A INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN-206.SNP.4:3945147 chr04:003945147 0 W/3945147-3945147 FN-206 Single Base Substitution T-C INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN1453-S.SNP.4:3945472 chr04:003945472 0 W/3945472-3945472 FN1453-S Single Base Substitution G-T INTRON HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1478-S.SNP.4:3947226 chr04:003947226 0 W/3947226-3947226 FN1478-S Single Base Substitution T-C INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN-390.SNP.4:3957000 chr04:003957000 0 W/3957000-3957000 FN-390 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g07450 retrotransposon protein, putative, unclassified, expressed SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3105-S.SNP.4:3958006 chr04:003958006 0 W/3958006-3958006 FN3105-S SNP A -> C AC=1;AN=184;BQB=0.949463;DP=3033;DP4=1226,1708,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000329707;MQB=1.52973e-11;MQSB=0.985462;RPB=0.0337916;SGB=53.3568;VDB=0.125295;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.4:3960797 chr04:003960797 0 W/3960797-3960797 FN918-S Single Base Substitution C-A INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2295.SNP.4:3961076 chr04:003961076 0 W/3961076-3961076 FN2295 SNP C -> G AC=1;AN=192;BQB=0.356831;DP=5372;DP4=2553,2490,26,23;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.3869e-21;MQSB=0.419647;RPB=0.979439;SGB=3.85482;VDB=0.971233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.4:3961686 chr04:003961686 0 W/3961686-3961686 FN3858-S SNP A -> T AC=2;AN=158;BQB=0.867786;DP=2367;DP4=1157,1106,10,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.37329e-15;MQSB=0.854791;RPB=0.52777;SGB=45.1437;VDB=0.641913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.4:3964304 chr04:003964304 0 W/3964304-3964304 FN1559-S Single Base Substitution A-C INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1297-S.SNP.4:4007977 chr04:004007977 0 W/4007977-4007977 FN1297-S Single Base Substitution C-T INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3806-S.SNP.4:4007977 chr04:004007977 0 W/4007977-4007977 FN3806-S SNP C -> T AC=2;AN=190;BQB=0.752878;DP=3142;DP4=1366,1654,25,15;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0210057;MQB=0.020707;MQSB=0.991051;RPB=0.960548;SGB=42.958;VDB=0.410769;EFF=INTRON(MODIFIER||||188|LOC_Os04g07530|protein_coding|CODING|LOC_Os04g07530.1|1|1) FN3843-S.SNP.4:4018462 chr04:004018462 0 W/4018462-4018462 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.949229;DP=2506;DP4=1279,1157,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.20472e-08;MQSB=0.910653;RPB=0.999907;SGB=39.6545;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.4:4019236 chr04:004019236 0 W/4019236-4019236 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.972303;DP=2471;DP4=1202,1219,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.00232166;MQSB=0.498245;RPB=0.821979;SGB=38.987;VDB=0.646725;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S339L|425|LOC_Os04g07550|protein_coding|CODING|LOC_Os04g07550.1|2|1) FN1096-S.SNP.4:4021044 chr04:004021044 0 W/4021044-4021044 FN1096-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g07560 retrotransposon, putative, centromere-specific SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. W466-5-1.SNP.4:4021509 chr04:004021509 0 W/4021509-4021509 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2468.SNP.4:4022440 chr04:004022440 0 W/4022440-4022440 FN2468 SNP G -> A AC=2;AN=200;BQB=0.137069;DP=3995;DP4=1692,1862,6,10;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.000250313;MQB=0.00672694;MQSB=0.541026;RPB=0.972721;SGB=47.4799;VDB=0.864993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1626-S.SNP.4:4028671 chr04:004028671 0 W/4028671-4028671 FN1626-S SNP T -> A AC=1;AN=188;BQB=0.0120209;DP=3549;DP4=1541,1952,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17963e-05;MQSB=0.984774;RPB=0.951705;SGB=-35.9944;VDB=0.258803;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P1183|1472|LOC_Os04g07580|protein_coding|CODING|LOC_Os04g07580.1|6|1) FN2532-S.SNP.4:4033350 chr04:004033350 0 W/4033350-4033350 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.973733;DP=4035;DP4=1823,1997,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=6.95209e-07;MQSB=0.930595;RPB=0.872987;SGB=86.3098;VDB=0.940103;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A198T|1472|LOC_Os04g07580|protein_coding|CODING|LOC_Os04g07580.1|2|1) FN2629-S.SNP.4:4040151 chr04:004040151 0 W/4040151-4040151 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.841439;DP=4727;DP4=2087,2385,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28769e-15;MQSB=0.956443;RPB=0.733718;SGB=90.7419;VDB=0.892716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S71N|720|LOC_Os04g07600|protein_coding|CODING|LOC_Os04g07600.1|2|1) FN1434-S.SNP.4:4051905 chr04:004051905 0 W/4051905-4051905 FN1434-S Single Base Substitution T-C INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2539-S.SNP.4:4051986 chr04:004051986 0 W/4051986-4051986 FN2539-S SNP T -> A AC=2;AN=198;BQB=0.159376;DP=4132;DP4=1836,2089,17,18;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=1.199e-13;MQSB=0.948765;RPB=0.914101;SGB=76.0565;VDB=0.178753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.4:4053803 chr04:004053803 0 W/4053803-4053803 FN2403 SNP G -> C AC=1;AN=200;BQB=0.943024;DP=5025;DP4=2325,2457,11,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.68713e-14;MQSB=0.881155;RPB=0.98715;SGB=76.3213;VDB=0.299414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.4:4082766 chr04:004082766 0 W/4082766-4082766 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.847921;DP=3047;DP4=1545,1382,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0;MQB=0.56524;MQSB=0.000937465;RPB=0.92184;SGB=49.0954;VDB=0.00325952;EFF=INTRON(MODIFIER||||1154|LOC_Os04g07670|protein_coding|CODING|LOC_Os04g07670.1|1|1) FN2707-S.SNP.4:4084155 chr04:004084155 0 W/4084155-4084155 FN2707-S SNP G -> T AC=1;AN=200;BQB=0.865706;DP=4613;DP4=2263,2110,5,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.000133284;MQSB=0.416516;RPB=0.931327;SGB=33.0593;VDB=0.43896;EFF=INTRON(MODIFIER||||1154|LOC_Os04g07670|protein_coding|CODING|LOC_Os04g07670.1|3|1) FN2711-S.SNP.4:4084440 chr04:004084440 0 W/4084440-4084440 FN2711-S SNP G -> T AC=1;AN=200;BQB=0.152367;DP=4609;DP4=1990,2307,7,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000433934;MQB=1.8374e-08;MQSB=0.227116;RPB=0.777451;SGB=40.2696;VDB=0.25684;EFF=INTRON(MODIFIER||||1154|LOC_Os04g07670|protein_coding|CODING|LOC_Os04g07670.1|3|1) FN985-S.SNP.4:4086248 chr04:004086248 0 W/4086248-4086248 FN985-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g07670 retrotransposon protein, putative, unclassified, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2749-S.SNP.4:4104665 chr04:004104665 0 W/4104665-4104665 FN2749-S SNP C -> T AC=2;AN=200;BQB=0.855891;DP=5072;DP4=2554,2261,15,11;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0.000197161;MQB=1.27093e-07;MQSB=0.428685;RPB=0.773018;SGB=114.132;VDB=0.201895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.4:4121545 chr04:004121545 0 W/4121545-4121545 FN1073-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g07740 retrotransposon protein, putative, unclassified, expressed SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN_788-1-1.SNP.4:4122115 chr04:004122115 0 W/4122115-4122115 FN_788-1-1 Single Base Substitution G-A HET LOC_Os04g07740 retrotransposon protein, putative, unclassified, expressed SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1212-S.SNP.4:4122763 chr04:004122763 0 W/4122763-4122763 FN1212-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN743-S.SNP.4:4124985 chr04:004124985 0 W/4124985-4124985 FN743-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2530-S.SNP.4:4134352 chr04:004134352 0 W/4134352-4134352 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.326119;DP=3964;DP4=1833,1940,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0;MQB=0.0143669;MQSB=4.57945e-05;RPB=0.914708;SGB=12.5396;VDB=0.379035;EFF=INTRON(MODIFIER||||1556|LOC_Os04g07784|protein_coding|CODING|LOC_Os04g07784.1|2|1) FN3479-S.SNP.4:4144665 chr04:004144665 0 W/4144665-4144665 FN3479-S SNP C -> T AC=1;AN=184;BQB=0.992388;DP=3021;DP4=1491,1453,13,2;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0;MQB=0.00629554;MQSB=0.929882;RPB=0.964136;SGB=62.3078;VDB=0.412108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D101N|441|LOC_Os04g07810|protein_coding|CODING|LOC_Os04g07810.1|1|1) FN-86.SNP.4:4145159 chr04:004145159 0 W/4145159-4145159 FN-86 Single Base Substitution G-T INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1221-S.SNP.4:4147252 chr04:004147252 0 W/4147252-4147252 FN1221-S Single Base Substitution A-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1186-S.SNP.4:4167957 chr04:004167957 0 W/4167957-4167957 FN1186-S Single Base Substitution A-C INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2095-S.SNP.4:4173669 chr04:004173669 0 W/4173669-4173669 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.52918;DP=3555;DP4=1684,1829,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=9.62366e-06;MQSB=0.00609503;RPB=0.774106;SGB=-40.0741;VDB=0.1368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R70H|240|LOC_Os04g07840|protein_coding|CODING|LOC_Os04g07840.1|1|1) FN689-S.SNP.4:4177960 chr04:004177960 0 W/4177960-4177960 FN689-S Single Base Substitution G-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2667-S.SNP.4:4180235 chr04:004180235 0 W/4180235-4180235 FN2667-S SNP C -> G AC=2;AN=200;BQB=0.796865;DP=2822;DP4=1551,1059,10,5;HOB=0.0198;ICB=0.495051;MQ=35;MQ0F=0.0155918;MQB=0.540989;MQSB=0;RPB=0.983188;SGB=63.4749;VDB=0.587892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.4:4185036 chr04:004185036 0 W/4185036-4185036 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.556107;DP=3005;DP4=1897,965,4,4;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0356073;MQB=0.839701;MQSB=7.73654e-14;RPB=0.760594;SGB=31.2392;VDB=0.591996;EFF=UTR_3_PRIME(MODIFIER||581||183|LOC_Os04g07860|protein_coding|CODING|LOC_Os04g07860.1|1|1) FN-207.SNP.4:4189864 chr04:004189864 0 W/4189864-4189864 FN-207 Single Base Substitution A-C INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN563-S.SNP.4:4198899 chr04:004198899 0 W/4198899-4198899 FN563-S Single Base Substitution G-C INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN1675-S.SNP.4:4205110 chr04:004205110 0 W/4205110-4205110 FN1675-S SNP G -> T AC=2;AN=188;BQB=0.861034;DP=2223;DP4=1137,1032,16,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.77544e-13;MQSB=0.906481;RPB=0.314869;SGB=-73.5561;VDB=0.517404;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.4:4205111 chr04:004205111 0 W/4205111-4205111 FN1675-S SNP C -> T AC=2;AN=188;BQB=0.793385;DP=2227;DP4=1147,1037,14,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.36004e-14;MQSB=0.939164;RPB=0.762145;SGB=94.4119;VDB=0.477295;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.4:4209517 chr04:004209517 0 W/4209517-4209517 FN729-S Single Base Substitution C-T INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2230-S.SNP.4:4211798 chr04:004211798 0 W/4211798-4211798 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.961;DP=5414;DP4=2562,2531,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00332471;MQB=4.13536e-08;MQSB=7.83874e-11;RPB=0.998336;SGB=30.527;VDB=0.357307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.4:4223312 chr04:004223312 0 W/4223312-4223312 FN2734-S SNP C -> G AC=2;AN=200;BQB=0.938407;DP=4312;DP4=2230,1899,8,5;HOB=0.0198;ICB=0.495051;MQ=26;MQ0F=0;MQB=0.891669;MQSB=0.166306;RPB=0.0271234;SGB=54.2646;VDB=0.00260195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.4:4225103 chr04:004225103 0 W/4225103-4225103 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.783488;DP=3677;DP4=1504,2098,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=4.97677e-10;MQSB=0.344954;RPB=0.263557;SGB=-46.9043;VDB=0.0296425;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.4:4226861 chr04:004226861 0 W/4226861-4226861 FN224-S Single Base Substitution G-T INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN2421.SNP.4:4234807 chr04:004234807 0 W/4234807-4234807 FN2421 SNP G -> A AC=1;AN=200;BQB=0.805469;DP=4472;DP4=2154,2102,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30147e-12;MQSB=0.979311;RPB=0.424038;SGB=86.5007;VDB=0.704798;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L154|866|LOC_Os04g07944|protein_coding|CODING|LOC_Os04g07944.1|2|1) FN1735-S.SNP.4:4235414 chr04:004235414 0 W/4235414-4235414 FN1735-S SNP C -> G AC=1;AN=188;BQB=0.777993;DP=2723;DP4=1323,1356,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000367242;MQB=0.00190378;MQSB=0.107646;RPB=0.841908;SGB=33.7061;VDB=0.121629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A305G|866|LOC_Os04g07944|protein_coding|CODING|LOC_Os04g07944.1|3|1) FN882-S.SNP.4:4236301 chr04:004236301 0 W/4236301-4236301 FN882-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g07944 retrotransposon, putative, centromere-specific, expressed SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN-364.SNP.4:4236772 chr04:004236772 0 W/4236772-4236772 FN-364 Single Base Substitution A-G INTRON HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN1731-S.SNP.4:4240473 chr04:004240473 0 W/4240473-4240473 FN1731-S SNP A -> C AC=1;AN=188;BQB=0.670421;DP=4032;DP4=1921,2089,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.61253e-06;MQSB=0.914028;RPB=0.0159331;SGB=5.5382;VDB=0.0870779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.4:4243836 chr04:004243836 0 W/4243836-4243836 FN1209-S Single Base Substitution G-A STOP_GAINED HET LOC_Os04g07970 expressed protein SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN788-S.SNP.4:4254068 chr04:004254068 0 W/4254068-4254068 FN788-S Single Base Substitution T-C INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN3715-S.SNP.4:4271371 chr04:004271371 0 W/4271371-4271371 FN3715-S SNP C -> A AC=1;AN=190;BQB=0.887856;DP=2908;DP4=1339,1445,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.26139e-07;MQSB=0.923311;RPB=0.764431;SGB=43.2083;VDB=0.925773;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.4:4278654 chr04:004278654 0 W/4278654-4278654 FN4279-S SNP G -> A AC=1;AN=170;BQB=0.909545;DP=2575;DP4=1136,1343,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000201899;MQSB=0.981686;RPB=0.728786;SGB=17.6652;VDB=0.666245;EFF=INTRON(MODIFIER||||363|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.6|1|1),INTRON(MODIFIER||||419|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.5|1|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.1|3|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.2|3|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.3|3|1) FN4161-S.SNP.4:4279283 chr04:004279283 0 W/4279283-4279283 FN4161-S SNP G -> A AC=1;AN=170;BQB=0.90381;DP=2305;DP4=1254,993,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.00205771;MQSB=0.194403;RPB=0.930631;SGB=47.8722;VDB=0.300087;EFF=INTRON(MODIFIER||||363|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.6|1|1),INTRON(MODIFIER||||419|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.5|1|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.1|3|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.2|3|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.3|3|1) FN2701-S.SNP.4:4288808 chr04:004288808 0 W/4288808-4288808 FN2701-S SNP T -> G AC=1;AN=200;BQB=0.997476;DP=4823;DP4=2227,2391,19,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=6.41248e-08;MQSB=0.937771;RPB=0.775948;SGB=127.947;VDB=0.0870769;EFF=INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.1|18|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.2|18|1),INTRON(MODIFIER||||624|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.3|18|1),INTRON(MODIFIER||||419|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.4|13|1),INTRON(MODIFIER||||419|LOC_Os04g08034|protein_coding|CODING|LOC_Os04g08034.5|15|1) FN1284-S.SNP.4:4300064 chr04:004300064 0 W/4300064-4300064 FN1284-S Single Base Substitution T-C INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN846-S.SNP.4:4303802 chr04:004303802 0 W/4303802-4303802 FN846-S Single Base Substitution T-G INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3576-S.SNP.4:4305706 chr04:004305706 0 W/4305706-4305706 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.910066;DP=3072;DP4=1216,1771,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.55598e-12;MQSB=0.685273;RPB=0.489952;SGB=85.3253;VDB=0.0458681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.4:4321277 chr04:004321277 0 W/4321277-4321277 FN2385 SNP T -> C AC=1;AN=192;BQB=0.509877;DP=4916;DP4=2164,2329,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203417;MQB=2.06305e-12;MQSB=0.990384;RPB=0.799967;SGB=-10.2539;VDB=0.414899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T14A|752|LOC_Os04g08080|protein_coding|CODING|LOC_Os04g08080.1|1|1) FN_N1-169-1.SNP.4:4329813 chr04:004329813 0 W/4329813-4329813 FN_N1-169-1 Single Base Substitution G-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1228-S.SNP.4:4335314 chr04:004335314 0 W/4335314-4335314 FN1228-S Single Base Substitution C-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3581-S.SNP.4:4335885 chr04:004335885 0 W/4335885-4335885 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.999162;DP=2328;DP4=985,1164,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000859107;MQB=0.000614468;MQSB=0.555729;RPB=0.853828;SGB=5.78296;VDB=0.77747;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.4:4339416 chr04:004339416 0 W/4339416-4339416 FN705-S Single Base Substitution G-A INTRON HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN3310-S.SNP.4:4340146 chr04:004340146 0 W/4340146-4340146 FN3310-S SNP C -> G AC=1;AN=184;BQB=0.962392;DP=4161;DP4=1657,2388,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0759433;MQB=0.979528;MQSB=6.46969e-21;RPB=0.74712;SGB=66.8296;VDB=0.385941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G297R|827|LOC_Os04g08150|protein_coding|CODING|LOC_Os04g08150.1|6|1) FN3809-S.SNP.4:4344973 chr04:004344973 0 W/4344973-4344973 FN3809-S SNP G -> C AC=1;AN=190;BQB=0.889956;DP=3197;DP4=1404,1679,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55426e-06;MQSB=0.99656;RPB=0.516684;SGB=53.6492;VDB=0.824937;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A28|431|LOC_Os04g08160|protein_coding|CODING|LOC_Os04g08160.1|1|1) FN2750-S.SNP.4:4361560 chr04:004361560 0 W/4361560-4361560 FN2750-S SNP T -> A AC=2;AN=200;BQB=0.977098;DP=4924;DP4=2526,2186,32,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.77234e-24;MQSB=0.987505;RPB=0.911578;SGB=-45.5811;VDB=0.6196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.4:4368591 chr04:004368591 0 W/4368591-4368591 FN2594-S SNP A -> T AC=2;AN=198;BQB=0.812177;DP=3318;DP4=1373,1586,14,11;HOB=0.019998;ICB=0.495001;MQ=26;MQ0F=0.274563;MQB=0.161462;MQSB=0;RPB=0.2529;SGB=109.285;VDB=0.559894;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.4:4369680 chr04:004369680 0 W/4369680-4369680 FN964-S Single Base Substitution C-T INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3858-S.SNP.4:4375829 chr04:004375829 0 W/4375829-4375829 FN3858-S SNP A -> T AC=2;AN=158;BQB=0.176576;DP=2264;DP4=899,1128,10,6;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000883392;MQB=0.00154641;MQSB=0.650403;RPB=0.848864;SGB=3.4556;VDB=0.504518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.4:4375989 chr04:004375989 0 W/4375989-4375989 FN1508-S Single Base Substitution T-C INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN874-S.SNP.4:4378758 chr04:004378758 0 W/4378758-4378758 FN874-S Single Base Substitution A-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2498.SNP.4:4379698 chr04:004379698 0 W/4379698-4379698 FN2498 SNP G -> A AC=1;AN=200;BQB=0.139664;DP=4415;DP4=2209,2015,11,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.73758e-08;MQSB=0.0726574;RPB=0.995133;SGB=37.3004;VDB=0.969465;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.4:4381115 chr04:004381115 0 W/4381115-4381115 FN429-S Single Base Substitution G-A INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-198.SNP.4:4381653 chr04:004381653 0 W/4381653-4381653 FN-198 Single Base Substitution A-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2158-S.SNP.4:4381715 chr04:004381715 0 W/4381715-4381715 FN2158-S SNP T -> C AC=1;AN=168;BQB=0.00394243;DP=3563;DP4=1353,2171,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0103845;MQB=0.681627;MQSB=0.0755592;RPB=0.0614891;SGB=-122.918;VDB=0.327203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.4:4387197 chr04:004387197 0 W/4387197-4387197 FN2445 SNP G -> A AC=1;AN=200;BQB=0.599633;DP=4391;DP4=2187,1831,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.14354e-06;MQSB=0.99886;RPB=0.571726;SGB=29.4541;VDB=0.0377809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.4:4393419 chr04:004393419 0 W/4393419-4393419 FN3541-S SNP G -> A AC=2;AN=188;BQB=0.963463;DP=2954;DP4=1478,1400,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.18589e-16;MQSB=0.993396;RPB=0.715609;SGB=121.672;VDB=0.965117;EFF=INTRON(MODIFIER||||233|LOC_Os04g08230|protein_coding|CODING|LOC_Os04g08230.1|1|1) FN2752-S.SNP.4:4394064 chr04:004394064 0 W/4394064-4394064 FN2752-S SNP A -> G AC=2;AN=200;BQB=0.989338;DP=5121;DP4=2399,2442,15,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000195274;MQB=4.3524e-19;MQSB=0.98173;RPB=0.885598;SGB=115.978;VDB=0.462282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.4:4395225 chr04:004395225 0 W/4395225-4395225 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.392658;DP=4892;DP4=2437,2222,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18589e-08;MQSB=0.999197;RPB=0.0069585;SGB=29.4849;VDB=0.0889505;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.4:4400300 chr04:004400300 0 W/4400300-4400300 FN473-S Single Base Substitution C-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN473-S.SNP.4:4400304 chr04:004400304 0 W/4400304-4400304 FN473-S Single Base Substitution A-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1209-S.SNP.4:4408801 chr04:004408801 0 W/4408801-4408801 FN1209-S Single Base Substitution C-T INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1209-S.SNP.4:4408802 chr04:004408802 0 W/4408802-4408802 FN1209-S Single Base Substitution A-T INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2742-S.SNP.4:4417008 chr04:004417008 0 W/4417008-4417008 FN2742-S SNP A -> T AC=1;AN=200;BQB=0.864825;DP=4419;DP4=2095,2161,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.89007e-12;MQSB=0.70733;RPB=0.846075;SGB=77.2904;VDB=0.782382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.4:4417009 chr04:004417009 0 W/4417009-4417009 FN2742-S SNP A -> T AC=1;AN=200;BQB=0.594736;DP=4417;DP4=2096,2139,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.6683e-13;MQSB=0.733463;RPB=0.65164;SGB=61.9006;VDB=0.747732;EFF=INTERGENIC(MODIFIER||||||||||1) FN900-S.SNP.4:4423778 chr04:004423778 0 W/4423778-4423778 FN900-S Single Base Substitution G-A INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN900-S.SNP.4:4423781 chr04:004423781 0 W/4423781-4423781 FN900-S Single Base Substitution C-A INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN239-S.SNP.4:4426336 chr04:004426336 0 W/4426336-4426336 FN239-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN897-S.SNP.4:4431993 chr04:004431993 0 W/4431993-4431993 FN897-S Single Base Substitution G-A INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN-231.SNP.4:4433987 chr04:004433987 0 W/4433987-4433987 FN-231 Single Base Substitution C-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2750-S.SNP.4:4434408 chr04:004434408 0 W/4434408-4434408 FN2750-S SNP C -> G AC=1;AN=200;BQB=0.561813;DP=4528;DP4=2076,2213,9,5;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00618375;MQB=0.0066504;MQSB=0;RPB=0.893122;SGB=58.8698;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.4:4436280 chr04:004436280 0 W/4436280-4436280 FN703-S Single Base Substitution T-A INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3369-S.SNP.4:4451680 chr04:004451680 0 W/4451680-4451680 FN3369-S SNP G -> T AC=1;AN=184;BQB=0.626427;DP=2815;DP4=1414,1287,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.61305e-06;MQSB=0.992109;RPB=0.911623;SGB=39.2697;VDB=0.534612;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.4:4457725 chr04:004457725 0 W/4457725-4457725 FN625-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-78.SNP.4:4458312 chr04:004458312 0 W/4458312-4458312 FN-78 Single Base Substitution T-A INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN469-S.SNP.4:4458364 chr04:004458364 0 W/4458364-4458364 FN469-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN702-S.SNP.4:4461835 chr04:004461835 0 W/4461835-4461835 FN702-S Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1195-S.SNP.4:4466505 chr04:004466505 0 W/4466505-4466505 FN1195-S Single Base Substitution C-T INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN979-S.SNP.4:4467171 chr04:004467171 0 W/4467171-4467171 FN979-S Single Base Substitution G-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN-200.SNP.4:4468851 chr04:004468851 0 W/4468851-4468851 FN-200 Single Base Substitution A-G INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN2581-S.SNP.4:4473459 chr04:004473459 0 W/4473459-4473459 FN2581-S SNP G -> A AC=1;AN=196;BQB=0.519652;DP=4208;DP4=2147,1801,5,9;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.56832e-07;MQSB=0.790434;RPB=0.960912;SGB=21.559;VDB=0.392815;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I18|956|LOC_Os04g08370|protein_coding|CODING|LOC_Os04g08370.1|1|1) FN-197.SNP.4:4474778 chr04:004474778 0 W/4474778-4474778 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2410.SNP.4:4477567 chr04:004477567 0 W/4477567-4477567 FN2410 SNP T -> A AC=1;AN=200;BQB=0.867817;DP=4946;DP4=2444,2185,20,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.59048e-18;MQSB=0.840122;RPB=0.849549;SGB=105.163;VDB=0.0622459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.4:4480387 chr04:004480387 0 W/4480387-4480387 FN2619-S SNP G -> A AC=2;AN=186;BQB=0.999957;DP=4004;DP4=1909,1650,119,54;HOB=0.0212741;ICB=0.494682;MQ=35;MQ0F=0.0789211;MQB=0;MQSB=1.81104e-05;RPB=0.0852482;SGB=-1794.51;VDB=1.02746e-08;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.4:4480644 chr04:004480644 0 W/4480644-4480644 FN2619-S SNP C -> G AC=2;AN=186;BQB=0.377986;DP=4240;DP4=1953,2018,21,12;HOB=0.0212741;ICB=0.494682;MQ=43;MQ0F=0.000943396;MQB=2.74488e-05;MQSB=1.58958e-20;RPB=0.0160148;SGB=70.8662;VDB=0.313713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.4:4480948 chr04:004480948 0 W/4480948-4480948 FN1613-S Single Base Substitution A-G INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN3305-S.SNP.4:4486080 chr04:004486080 0 W/4486080-4486080 FN3305-S SNP A -> G AC=1;AN=184;BQB=0.984158;DP=2972;DP4=1406,1481,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53213e-05;MQSB=0.888864;RPB=0.906251;SGB=13.188;VDB=0.999923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I902T|1014|LOC_Os04g08390|protein_coding|CODING|LOC_Os04g08390.1|3|1) FN3915-S.SNP.4:4492850 chr04:004492850 0 W/4492850-4492850 FN3915-S SNP T -> C AC=1;AN=158;BQB=0.987245;DP=2694;DP4=1557,989,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.225687;MQB=0.275288;MQSB=0;RPB=0.943344;SGB=27.3346;VDB=0.488366;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.4:4495336 chr04:004495336 0 W/4495336-4495336 FN3311-S SNP C -> T AC=2;AN=184;BQB=0.57223;DP=2176;DP4=1027,1058,6,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.55927e-05;MQSB=0.921492;RPB=0.777541;SGB=62.3078;VDB=0.826047;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.4:4495336 chr04:004495336 0 W/4495336-4495336 FN3311-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1690-S.SNP.4:4502866 chr04:004502866 0 W/4502866-4502866 FN1690-S SNP T -> C AC=1;AN=188;BQB=0.00585212;DP=4056;DP4=2235,1798,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8084e-05;MQSB=0.986154;RPB=0.0959105;SGB=-56.0757;VDB=0.277968;EFF=INTRON(MODIFIER||||1140|LOC_Os04g08400|protein_coding|CODING|LOC_Os04g08400.1|5|1) FN2666-S.SNP.4:4508022 chr04:004508022 0 W/4508022-4508022 FN2666-S SNP A -> T AC=1;AN=200;BQB=0.999127;DP=4599;DP4=2158,2245,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96078e-14;MQSB=0.814471;RPB=0.811289;SGB=17.5158;VDB=0.0538122;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.4:4515712 chr04:004515712 0 W/4515712-4515712 FN-127 Single Base Substitution T-C INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3626-S.SNP.4:4522302 chr04:004522302 0 W/4522302-4522302 FN3626-S SNP G -> A AC=1;AN=188;BQB=0.973587;DP=2986;DP4=1424,1468,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5183e-06;MQSB=0.980861;RPB=0.663981;SGB=21.8853;VDB=0.630032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.4:4523753 chr04:004523753 0 W/4523753-4523753 FN2204-S SNP A -> T AC=1;AN=190;BQB=0.936164;DP=4648;DP4=2687,1599,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0105422;MQB=0.398779;MQSB=9.30076e-07;RPB=0.705418;SGB=103.742;VDB=0.608457;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.4:4524447 chr04:004524447 0 W/4524447-4524447 FN1453-S Single Base Substitution T-C INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1521-S.SNP.4:4524730 chr04:004524730 0 W/4524730-4524730 FN1521-S Single Base Substitution C-T INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. W470-2-1.SNP.4:4527400 chr04:004527400 0 W/4527400-4527400 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3807-S.SNP.4:4531798 chr04:004531798 0 W/4531798-4531798 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.99948;DP=3058;DP4=1555,1424,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35977e-07;MQSB=0.588569;RPB=0.661799;SGB=58.2031;VDB=0.187874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A830T|1041|LOC_Os04g08430|protein_coding|CODING|LOC_Os04g08430.1|3|1) FN3916-S.SNP.4:4533797 chr04:004533797 0 W/4533797-4533797 FN3916-S SNP T -> A AC=1;AN=158;BQB=0.992422;DP=2301;DP4=1215,991,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0173837;MQB=0.708351;MQSB=0.966784;RPB=0.987204;SGB=38.3284;VDB=0.984758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I1695F|1938|LOC_Os04g08440|protein_coding|CODING|LOC_Os04g08440.1|5|1) FN3472-S.SNP.4:4549862 chr04:004549862 0 W/4549862-4549862 FN3472-S SNP G -> T AC=1;AN=184;BQB=0.618515;DP=3135;DP4=1952,1071,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.88947e-08;MQSB=0.589999;RPB=0.820791;SGB=80.3949;VDB=0.115263;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.4:4550949 chr04:004550949 0 W/4550949-4550949 FN3472-S SNP G -> T AC=1;AN=184;BQB=0.462917;DP=2946;DP4=1618,1231,18,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0509165;MQB=0.0129197;MQSB=2.39376e-06;RPB=0.93587;SGB=48.493;VDB=0.978584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.4:4556679 chr04:004556679 0 W/4556679-4556679 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.874434;DP=4657;DP4=2305,2095,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.9865e-10;MQSB=0.995881;RPB=0.544189;SGB=51.0851;VDB=0.788586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.4:4564020 chr04:004564020 0 W/4564020-4564020 FN3674-S SNP A -> G AC=1;AN=188;BQB=0.509279;DP=3001;DP4=1497,1403,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.47314e-09;MQSB=0.73709;RPB=0.180562;SGB=64.5316;VDB=0.230629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.4:4568421 chr04:004568421 0 W/4568421-4568421 FN2686-S SNP C -> T AC=1;AN=200;BQB=0.0322268;DP=4797;DP4=2195,2336,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.37452e-05;MQSB=0.92536;RPB=0.909401;SGB=36.6644;VDB=0.950724;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S438|646|LOC_Os04g08470|protein_coding|CODING|LOC_Os04g08470.1|2|1) FN3699-S.SNP.4:4576354 chr04:004576354 0 W/4576354-4576354 FN3699-S SNP G -> T AC=1;AN=188;BQB=0.926953;DP=2933;DP4=1577,1230,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000340948;MQB=3.56482e-06;MQSB=0.963361;RPB=0.746444;SGB=39.9877;VDB=0.332598;EFF=INTRON(MODIFIER||||899|LOC_Os04g08480|protein_coding|CODING|LOC_Os04g08480.1|5|1) FN3864-S.SNP.4:4579360 chr04:004579360 0 W/4579360-4579360 FN3864-S SNP G -> A AC=1;AN=158;BQB=0.868436;DP=2239;DP4=1243,868,7,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.17119e-09;MQSB=0.889209;RPB=0.606877;SGB=61.029;VDB=0.373458;EFF=INTRON(MODIFIER||||899|LOC_Os04g08480|protein_coding|CODING|LOC_Os04g08480.1|1|1) FN-38.SNP.4:4579776 chr04:004579776 0 W/4579776-4579776 FN-38 Single Base Substitution G-A INTERGENIC HET SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN2689-S.SNP.4:4579776 chr04:004579776 0 W/4579776-4579776 FN2689-S SNP G -> A AC=2;AN=200;BQB=0.374121;DP=4583;DP4=2428,1788,16,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.874e-10;MQSB=0.906916;RPB=0.990459;SGB=100.316;VDB=0.936806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.4:4579776 chr04:004579776 0 W/4579776-4579776 FN3794-S SNP G -> A AC=1;AN=190;BQB=0.933328;DP=3082;DP4=1678,1275,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80021e-10;MQSB=0.119935;RPB=0.0720266;SGB=80.9724;VDB=0.180171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.4:4579776 chr04:004579776 0 W/4579776-4579776 FN3887-S SNP G -> A AC=2;AN=158;BQB=0.713664;DP=2683;DP4=1482,1068,24,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.32288e-12;MQSB=0.197098;RPB=0.780159;SGB=138.826;VDB=0.12678;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.4:4579776 chr04:004579776 0 W/4579776-4579776 FN4110-S SNP G -> A AC=1;AN=182;BQB=0.804044;DP=3041;DP4=1661,1278,12,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.00256e-11;MQSB=0.292764;RPB=0.76596;SGB=75.6874;VDB=0.717776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.4:4589580 chr04:004589580 0 W/4589580-4589580 FN1357-S Single Base Substitution A-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1673-S.SNP.4:4590964 chr04:004590964 0 W/4590964-4590964 FN1673-S SNP G -> C AC=1;AN=188;BQB=0.694935;DP=3102;DP4=1389,1680,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.02633e-11;MQSB=0.753429;RPB=0.998468;SGB=14.798;VDB=0.529851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.4:4591859 chr04:004591859 0 W/4591859-4591859 FN1548-S SNP G -> A AC=2;AN=188;BQB=0.992437;DP=2788;DP4=1476,1263,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.23306e-16;MQSB=0.978652;RPB=0.76457;SGB=76.9421;VDB=0.413394;EFF=INTRON(MODIFIER||||253|LOC_Os04g08500|protein_coding|CODING|LOC_Os04g08500.1|1|1) FN2655-S.SNP.4:4593218 chr04:004593218 0 W/4593218-4593218 FN2655-S SNP A -> G AC=1;AN=200;BQB=0.844525;DP=4552;DP4=2287,2090,7,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31329e-15;MQSB=0.977681;RPB=0.0763545;SGB=52.9314;VDB=0.976863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.4:4594313 chr04:004594313 0 W/4594313-4594313 FN2408 SNP A -> T AC=1;AN=200;BQB=0.907856;DP=4770;DP4=2266,2170,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50955e-14;MQSB=0.791607;RPB=0.442684;SGB=55.5366;VDB=0.579758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.4:4600385 chr04:004600385 0 W/4600385-4600385 FN3568-S SNP C -> T AC=2;AN=188;BQB=0.987156;DP=2735;DP4=1469,1165,18,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.30667e-16;MQSB=0.954172;RPB=0.639719;SGB=56.5957;VDB=0.00596738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.4:4601304 chr04:004601304 0 W/4601304-4601304 FN3519-S SNP T -> C AC=2;AN=188;BQB=0.956776;DP=2831;DP4=1361,1384,6,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000353232;MQB=1.16532e-08;MQSB=0.995951;RPB=0.999952;SGB=35.9843;VDB=0.821961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.4:4603793 chr04:004603793 0 W/4603793-4603793 FN2473 SNP C -> T AC=2;AN=200;BQB=0.830753;DP=4659;DP4=2351,1989,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.4058e-26;MQSB=0.968289;RPB=0.835514;SGB=197.025;VDB=0.711073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.4:4604103 chr04:004604103 0 W/4604103-4604103 FN2607-S SNP T -> A AC=1;AN=198;BQB=0.809195;DP=4281;DP4=2187,1918,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63086e-07;MQSB=0.819641;RPB=0.975209;SGB=18.9639;VDB=0.573466;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.4:4604840 chr04:004604840 0 W/4604840-4604840 FN1042-S Single Base Substitution T-C INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1444-S.SNP.4:4607071 chr04:004607071 0 W/4607071-4607071 FN1444-S Single Base Substitution A-T INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3571-S.SNP.4:4612119 chr04:004612119 0 W/4612119-4612119 FN3571-S SNP C -> A AC=1;AN=188;BQB=0.996285;DP=3432;DP4=1727,1627,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0675991;MQB=0.99983;MQSB=3.22545e-19;RPB=0.57877;SGB=67.1521;VDB=0.669814;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.4:4613758 chr04:004613758 0 W/4613758-4613758 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3867-S.SNP.4:4618039 chr04:004618039 0 W/4618039-4618039 FN3867-S SNP T -> C AC=1;AN=158;BQB=0.924969;DP=3235;DP4=1789,1312,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=11;MQ0F=0.561051;MQB=0.0104998;MQSB=0;RPB=0.909267;SGB=82.0227;VDB=0.0195671;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.4:4633341 chr04:004633341 0 W/4633341-4633341 FN971-S Single Base Substitution A-G INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1618-S.SNP.4:4634355 chr04:004634355 0 W/4634355-4634355 FN1618-S Single Base Substitution C-T INTERGENIC Homo SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2568-S.SNP.4:4636025 chr04:004636025 0 W/4636025-4636025 FN2568-S SNP G -> T AC=2;AN=198;BQB=0.913263;DP=4043;DP4=2017,1830,8,7;HOB=0.019998;ICB=0.495001;MQ=29;MQ0F=0.209251;MQB=0.208804;MQSB=0;RPB=0.950385;SGB=43.7442;VDB=0.288932;EFF=INTERGENIC(MODIFIER||||||||||1) FN2568-S.SNP.4:4636027 chr04:004636027 0 W/4636027-4636027 FN2568-S SNP A -> T AC=2;AN=198;BQB=0.874414;DP=4054;DP4=2028,1817,9,8;HOB=0.019998;ICB=0.495001;MQ=29;MQ0F=0.206216;MQB=0.177905;MQSB=0;RPB=0.836449;SGB=50.9344;VDB=0.42324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.4:4638763 chr04:004638763 0 W/4638763-4638763 FN2491 SNP A -> G AC=1;AN=200;BQB=0.978526;DP=5001;DP4=2482,2060,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.70342e-06;MQSB=0.934011;RPB=0.813578;SGB=22.2439;VDB=0.449235;EFF=INTRON(MODIFIER||||337|LOC_Os04g08550|protein_coding|CODING|LOC_Os04g08550.1|1|1) FN2549-S.SNP.4:4642319 chr04:004642319 0 W/4642319-4642319 FN2549-S SNP A -> G AC=2;AN=198;BQB=0.380998;DP=2746;DP4=883,1524,5,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=0.000189869;MQSB=2.12707e-22;RPB=0.808292;SGB=2.96892;VDB=0.774157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.4:4649084 chr04:004649084 0 W/4649084-4649084 FN2166-S SNP A -> T AC=1;AN=168;BQB=0.0183433;DP=2464;DP4=1230,1208,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00336744;MQSB=0.0222377;RPB=0.817914;SGB=-17.5266;VDB=0.893839;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.4:4655704 chr04:004655704 0 W/4655704-4655704 FN852-S Single Base Substitution G-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2330.SNP.4:4662023 chr04:004662023 0 W/4662023-4662023 FN2330 SNP A -> G AC=1;AN=192;BQB=0.961268;DP=5455;DP4=2901,2164,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000183318;MQB=1.59645e-13;MQSB=0.940116;RPB=0.275891;SGB=41.7357;VDB=0.828962;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.4:4664314 chr04:004664314 0 W/4664314-4664314 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN4002-S.SNP.4:4671784 chr04:004671784 0 W/4671784-4671784 FN4002-S SNP G -> A AC=1;AN=168;BQB=0.437209;DP=2509;DP4=1250,1119,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.62446e-05;MQSB=0.749669;RPB=0.999658;SGB=27.8864;VDB=0.958961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.4:4672318 chr04:004672318 0 W/4672318-4672318 FN1533-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN2779-S.SNP.4:4680747 chr04:004680747 0 W/4680747-4680747 FN2779-S SNP T -> G AC=1;AN=198;BQB=0.780602;DP=3552;DP4=1748,1557,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.91116e-12;MQSB=0.80869;RPB=0.922029;SGB=118.476;VDB=0.285693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.4:4685042 chr04:004685042 0 W/4685042-4685042 FN1210-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. W313-1-1-1-1.SNP.4:4686630 chr04:004686630 0 W/4686630-4686630 W313-1-1-1-1 Single Base Substitution G-T INTERGENIC HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN758-S.SNP.4:4691783 chr04:004691783 0 W/4691783-4691783 FN758-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g08640 cadmium tolerance factor, putative, expressed SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN1216-S.SNP.4:4701050 chr04:004701050 0 W/4701050-4701050 FN1216-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN302-S.SNP.4:4707035 chr04:004707035 0 W/4707035-4707035 FN302-S Single Base Substitution C-T INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN302-S.SNP.4:4707037 chr04:004707037 0 W/4707037-4707037 FN302-S Single Base Substitution C-T INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN302-S.SNP.4:4707038 chr04:004707038 0 W/4707038-4707038 FN302-S Single Base Substitution G-T INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-99.SNP.4:4707805 chr04:004707805 0 W/4707805-4707805 FN-99 Single Base Substitution C-T INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-99.SNP.4:4707811 chr04:004707811 0 W/4707811-4707811 FN-99 Single Base Substitution C-G INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2386.SNP.4:4710278 chr04:004710278 0 W/4710278-4710278 FN2386 SNP A -> G AC=1;AN=192;BQB=0.466118;DP=4789;DP4=2221,2051,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.06235e-08;MQSB=0.999568;RPB=0.343336;SGB=8.91915;VDB=0.794806;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P425|771|LOC_Os04g08670|protein_coding|CODING|LOC_Os04g08670.1|3|1) FN1401-S.SNP.4:4712661 chr04:004712661 0 W/4712661-4712661 FN1401-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os04g08680 retrotransposon protein, putative, unclassified, expressed SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN4001-S.SNP.4:4714255 chr04:004714255 0 W/4714255-4714255 FN4001-S SNP C -> A AC=1;AN=168;BQB=0.786919;DP=2871;DP4=1376,1385,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.80102e-06;MQSB=0.763885;RPB=0.794284;SGB=27.8864;VDB=0.938014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q53H|606|LOC_Os04g08680|protein_coding|CODING|LOC_Os04g08680.1|1|1) FN3564-S.SNP.4:4716685 chr04:004716685 0 W/4716685-4716685 FN3564-S SNP T -> G AC=1;AN=188;BQB=0.974618;DP=2755;DP4=1425,1230,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1586e-09;MQSB=0.987604;RPB=0.758063;SGB=50.1574;VDB=0.306219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:4723067 chr04:004723067 0 W/4723067-4723067 FN2618-S SNP A -> T AC=1;AN=198;BQB=0.408139;DP=3900;DP4=2123,1581,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.72853e-09;MQSB=0.965425;RPB=0.983191;SGB=-12.6455;VDB=0.427043;EFF=INTRON(MODIFIER||||66|LOC_Os04g08700|protein_coding|CODING|LOC_Os04g08700.1|1|1) FN2197-S.SNP.4:4728012 chr04:004728012 0 W/4728012-4728012 FN2197-S SNP G -> A AC=2;AN=190;BQB=0.556247;DP=4107;DP4=1702,1895,14,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000243487;MQB=8.80096e-14;MQSB=0.117066;RPB=0.276919;SGB=19.6499;VDB=0.457941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C421Y|537|LOC_Os04g08710|protein_coding|CODING|LOC_Os04g08710.1|5|1) FN-316.SNP.4:4730918 chr04:004730918 0 W/4730918-4730918 FN-316 Single Base Substitution C-G INTERGENIC HOMO SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3388-S.SNP.4:4731888 chr04:004731888 0 W/4731888-4731888 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.450443;DP=2809;DP4=1488,888,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.44209e-10;MQSB=0.692839;RPB=0.0704966;SGB=-125.127;VDB=0.31306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.4:4740057 chr04:004740057 0 W/4740057-4740057 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.99951;DP=3411;DP4=1605,1702,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.56581e-08;MQSB=0.909075;RPB=0.521532;SGB=23.2751;VDB=0.704505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R284Q|670|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R284Q|763|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R284Q|763|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.1|2|1) FN1731-S.SNP.4:4740731 chr04:004740731 0 W/4740731-4740731 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.714322;DP=3511;DP4=1881,1593,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.32963e-11;MQSB=0.991818;RPB=0.109873;SGB=28.6195;VDB=0.474005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A509T|670|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A509T|763|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A509T|763|LOC_Os04g08740|protein_coding|CODING|LOC_Os04g08740.1|2|1) FN2683-S.SNP.4:4745373 chr04:004745373 0 W/4745373-4745373 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.384856;DP=4762;DP4=2456,2045,15,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.75723e-09;MQSB=0.00358395;RPB=0.86472;SGB=47.7211;VDB=0.672268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.4:4747211 chr04:004747211 0 W/4747211-4747211 FN1514-S Single Base Substitution G-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4025-S.SNP.4:4748981 chr04:004748981 0 W/4748981-4748981 FN4025-S SNP C -> A AC=1;AN=168;BQB=0.971412;DP=2453;DP4=1102,1247,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00010509;MQSB=0.749994;RPB=0.640596;SGB=34.4498;VDB=0.182763;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.4:4756446 chr04:004756446 0 W/4756446-4756446 W313-1-1-1-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN786-S.SNP.4:4761374 chr04:004761374 0 W/4761374-4761374 FN786-S Single Base Substitution C-A INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. W279-4-1.SNP.4:4762117 chr04:004762117 0 W/4762117-4762117 W279-4-1 Single Base Substitution T-G INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN872-S.SNP.4:4763151 chr04:004763151 0 W/4763151-4763151 FN872-S Single Base Substitution C-G INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3939-S.SNP.4:4773826 chr04:004773826 0 W/4773826-4773826 FN3939-S SNP G -> A AC=1;AN=158;BQB=0.798017;DP=2384;DP4=916,1373,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000176304;MQSB=0.00262883;RPB=0.939352;SGB=47.0672;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) W596-1-1.SNP.4:4782469 chr04:004782469 0 W/4782469-4782469 W596-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. W596-1-1.SNP.4:4783642 chr04:004783642 0 W/4783642-4783642 W596-1-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g08776 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. W426-1-1.SNP.4:4784296 chr04:004784296 0 W/4784296-4784296 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3710-S.SNP.4:4784732 chr04:004784732 0 W/4784732-4784732 FN3710-S SNP A -> G AC=1;AN=188;BQB=0.685216;DP=3175;DP4=1719,1189,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0274016;MQB=0.934287;MQSB=1.34325e-29;RPB=0.999992;SGB=-66.1037;VDB=0.0992927;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.4:4793416 chr04:004793416 0 W/4793416-4793416 FN4148-S SNP C -> A AC=1;AN=170;BQB=0.995531;DP=1980;DP4=345,1471,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.66513e-06;MQSB=0.911997;RPB=0.753399;SGB=47.8722;VDB=0.140079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.4:4797637 chr04:004797637 0 W/4797637-4797637 FN3991-S SNP T -> A AC=1;AN=168;BQB=0.998926;DP=2211;DP4=1277,792,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.4192e-05;MQSB=0.498287;RPB=0.568962;SGB=17.5943;VDB=0.208567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.4:4797987 chr04:004797987 0 W/4797987-4797987 FN2317 SNP C -> T AC=1;AN=192;BQB=0.259329;DP=4917;DP4=2343,2182,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.83653e-11;MQSB=0.601961;RPB=0.686001;SGB=12.0478;VDB=0.690688;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.4:4801945 chr04:004801945 0 W/4801945-4801945 FN4001-S SNP T -> C AC=1;AN=168;BQB=0.917911;DP=2691;DP4=1168,1421,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.63604e-11;MQSB=0.99342;RPB=0.925831;SGB=9.91396;VDB=0.0528465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.4:4803068 chr04:004803068 0 W/4803068-4803068 FN1106-S Single Base Substitution G-C INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1037-S.SNP.4:4805866 chr04:004805866 0 W/4805866-4805866 FN1037-S Single Base Substitution G-T INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1406-S.SNP.4:4809426 chr04:004809426 0 W/4809426-4809426 FN1406-S Single Base Substitution C-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1353-S.SNP.4:4824385 chr04:004824385 0 W/4824385-4824385 FN1353-S Single Base Substitution A-G INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1527-S.SNP.4:4824733 chr04:004824733 0 W/4824733-4824733 FN1527-S Single Base Substitution G-A INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2249-S.SNP.4:4869352 chr04:004869352 0 W/4869352-4869352 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.926525;DP=5171;DP4=2487,2318,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36937e-07;MQSB=0.73006;RPB=0.977278;SGB=10.3266;VDB=0.413856;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.4:4875277 chr04:004875277 0 W/4875277-4875277 FN928-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3366-S.SNP.4:4879859 chr04:004879859 0 W/4879859-4879859 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.856874;DP=3345;DP4=1607,1634,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.209268;MQB=0.588885;MQSB=0;RPB=0.988404;SGB=48.7425;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.4:4882420 chr04:004882420 0 W/4882420-4882420 FN3710-S SNP A -> G AC=1;AN=190;BQB=0.303885;DP=3053;DP4=1512,1379,61,10;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.056338;MQB=7.5235e-27;MQSB=0.154968;RPB=6.16033e-19;SGB=-1034.15;VDB=6.72715e-10;EFF=INTRON(MODIFIER||||1440|LOC_Os04g08832|protein_coding|CODING|LOC_Os04g08832.1|1|1) FN2698-S.SNP.4:4883507 chr04:004883507 0 W/4883507-4883507 FN2698-S SNP C -> G AC=1;AN=200;BQB=0.776303;DP=5780;DP4=3330,2204,11,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0179931;MQB=0.00122401;MQSB=0;RPB=0.722859;SGB=47.7211;VDB=0.746722;EFF=INTRON(MODIFIER||||1440|LOC_Os04g08832|protein_coding|CODING|LOC_Os04g08832.1|2|1) FN2542-S.SNP.4:4884547 chr04:004884547 0 W/4884547-4884547 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.676312;DP=3777;DP4=1906,1652,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00979613;MQB=6.75327e-11;MQSB=0.0285849;RPB=0.80284;SGB=68.91;VDB=0.77701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R554C|1440|LOC_Os04g08832|protein_coding|CODING|LOC_Os04g08832.1|3|1) FN755-S.SNP.4:4885861 chr04:004885861 0 W/4885861-4885861 FN755-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g08832 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-69.SNP.4:4886135 chr04:004886135 0 W/4886135-4886135 FN-69 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g08832 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1033-S.SNP.4:4888093 chr04:004888093 0 W/4888093-4888093 FN1033-S Single Base Substitution A-G INTERGENIC HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2379.SNP.4:4892656 chr04:004892656 0 W/4892656-4892656 FN2379 SNP G -> A AC=1;AN=192;BQB=0.979471;DP=4524;DP4=2132,2116,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0156941;MQB=0.600944;MQSB=0.000339494;RPB=0.203994;SGB=7.3548;VDB=0.524397;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.4:4893010 chr04:004893010 0 W/4893010-4893010 FN3819-S SNP G -> A AC=1;AN=190;BQB=0.950935;DP=2732;DP4=1333,1298,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.120791;MQB=0.529866;MQSB=1.68843e-09;RPB=0.991334;SGB=21.1058;VDB=0.822094;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.4:4893674 chr04:004893674 0 W/4893674-4893674 FN3693-S SNP T -> A AC=1;AN=188;BQB=0.753475;DP=2883;DP4=1311,1425,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0603538;MQB=0.7462;MQSB=0.0042243;RPB=0.936097;SGB=39.9877;VDB=0.414348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.4:4896678 chr04:004896678 0 W/4896678-4896678 FN2725-S SNP A -> T AC=1;AN=200;BQB=0.809481;DP=4623;DP4=2190,2283,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.94412e-08;MQSB=0.943249;RPB=0.695098;SGB=21.6694;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.4:4897738 chr04:004897738 0 W/4897738-4897738 FN1716-S SNP T -> A AC=2;AN=188;BQB=0.214694;DP=2621;DP4=1347,1197,20,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.38223e-17;MQSB=0.950667;RPB=0.999917;SGB=53.1036;VDB=0.880701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W171R|187|LOC_Os04g08836|protein_coding|CODING|LOC_Os04g08836.1|2|1) FN1459-S.SNP.4:4901618 chr04:004901618 0 W/4901618-4901618 FN1459-S Single Base Substitution G-A INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2233-S.SNP.4:4902647 chr04:004902647 0 W/4902647-4902647 FN2233-S SNP G -> A AC=1;AN=190;BQB=0.790868;DP=3411;DP4=1342,1658,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000586338;MQB=4.50854e-06;MQSB=0.000569907;RPB=0.539716;SGB=32.5467;VDB=0.320291;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.4:4903966 chr04:004903966 0 W/4903966-4903966 FN3598-S SNP G -> A AC=1;AN=186;BQB=0.904535;DP=3263;DP4=1353,1840,5,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=7.10283e-10;MQSB=0.776776;RPB=0.979951;SGB=67.1521;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.4:4903966 chr04:004903966 0 W/4903966-4903966 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.635887;DP=2233;DP4=1103,1041,22,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.54147e-14;MQSB=0.457231;RPB=0.331799;SGB=114.059;VDB=0.857902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:4908894 chr04:004908894 0 W/4908894-4908894 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.899981;DP=4378;DP4=2233,1873,4,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05508e-11;MQSB=0.991831;RPB=0.727398;SGB=54.6902;VDB=0.220791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.4:4908996 chr04:004908996 0 W/4908996-4908996 FN2401 SNP G -> A AC=1;AN=200;BQB=0.883979;DP=3949;DP4=1484,2193,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85639e-05;MQSB=0.773085;RPB=0.902462;SGB=25.849;VDB=0.97902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.4:4909651 chr04:004909651 0 W/4909651-4909651 FN2426 SNP G -> A AC=1;AN=200;BQB=0.860901;DP=3031;DP4=1648,981,12,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.11356e-07;MQSB=3.27186e-07;RPB=0.300299;SGB=37.3004;VDB=0.0807458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.4:4909660 chr04:004909660 0 W/4909660-4909660 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.987366;DP=1270;DP4=810,416,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000180764;MQSB=0.0519714;RPB=0.868326;SGB=35.3493;VDB=0.26398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.4:4911845 chr04:004911845 0 W/4911845-4911845 FN2137-S SNP C -> T AC=2;AN=168;BQB=0.776232;DP=2776;DP4=1505,1199,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.6996e-15;MQSB=0.999548;RPB=0.44245;SGB=-8.47945;VDB=0.949882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.4:4921975 chr04:004921975 0 W/4921975-4921975 FN1442-S Single Base Substitution G-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3629-S.SNP.4:4929541 chr04:004929541 0 W/4929541-4929541 FN3629-S SNP A -> C AC=1;AN=188;BQB=0.999771;DP=2637;DP4=1226,1254,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.09382e-08;MQSB=0.959933;RPB=0.419019;SGB=26.2136;VDB=0.634679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttC|L315F|724|LOC_Os04g09270|protein_coding|CODING|LOC_Os04g09270.1|2|1) FN979-S.SNP.4:4930436 chr04:004930436 0 W/4930436-4930436 FN979-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN500-S.SNP.4:4931435 chr04:004931435 0 W/4931435-4931435 FN500-S Single Base Substitution A-T INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN_N1-150-1.SNP.4:4934978 chr04:004934978 0 W/4934978-4934978 FN_N1-150-1 Single Base Substitution C-A Homo LOC_Os04g09284 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. W138-2-1.SNP.4:4935401 chr04:004935401 0 W/4935401-4935401 W138-2-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN558-S.SNP.4:4935555 chr04:004935555 0 W/4935555-4935555 FN558-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g09284 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN828-S.SNP.4:4944539 chr04:004944539 0 W/4944539-4944539 FN828-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g09310 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN-175.SNP.4:4947892 chr04:004947892 0 W/4947892-4947892 FN-175 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN4051-S.SNP.4:4960624 chr04:004960624 0 W/4960624-4960624 FN4051-S SNP C -> T AC=1;AN=168;BQB=0.944517;DP=2855;DP4=1396,1333,5,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43238e-09;MQSB=0.993451;RPB=0.407985;SGB=31.908;VDB=0.352024;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.4:4960751 chr04:004960751 0 W/4960751-4960751 FN-73 Single Base Substitution C-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2327.SNP.4:4963366 chr04:004963366 0 W/4963366-4963366 FN2327 SNP G -> A AC=1;AN=192;BQB=0.998091;DP=4380;DP4=2019,2049,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.86681e-09;MQSB=0.00158893;RPB=0.730497;SGB=68.2948;VDB=0.571457;EFF=INTERGENIC(MODIFIER||||||||||1) FN974-S.SNP.4:4964691 chr04:004964691 0 W/4964691-4964691 FN974-S Single Base Substitution A-T INTERGENIC HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3801-S.SNP.4:4966773 chr04:004966773 0 W/4966773-4966773 FN3801-S SNP T -> C AC=1;AN=190;BQB=0.506999;DP=2409;DP4=1153,1162,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4986e-08;MQSB=0.698823;RPB=0.784142;SGB=28.7675;VDB=0.958404;EFF=INTRON(MODIFIER||||82|LOC_Os04g09350|protein_coding|CODING|LOC_Os04g09350.3|1|1),INTRON(MODIFIER||||82|LOC_Os04g09350|protein_coding|CODING|LOC_Os04g09350.4|1|1) FN1371-S.SNP.4:4967795 chr04:004967795 0 W/4967795-4967795 FN1371-S Single Base Substitution G-A INTRON Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3105-S.SNP.4:4968331 chr04:004968331 0 W/4968331-4968331 FN3105-S SNP A -> T AC=1;AN=184;BQB=0.996588;DP=3180;DP4=1313,1735,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37459e-08;MQSB=0.999999;RPB=0.0723496;SGB=62.3078;VDB=0.0793901;EFF=INTRON(MODIFIER||||82|LOC_Os04g09350|protein_coding|CODING|LOC_Os04g09350.3|1|1),INTRON(MODIFIER||||82|LOC_Os04g09350|protein_coding|CODING|LOC_Os04g09350.4|1|1) FN347-S.SNP.4:4979170 chr04:004979170 0 W/4979170-4979170 FN347-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN-4.SNP.4:4979583 chr04:004979583 0 W/4979583-4979583 FN-4 Single Base Substitution G-A INTRON HET SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN711-S.SNP.4:4983606 chr04:004983606 0 W/4983606-4983606 FN711-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g09360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN3663-S.SNP.4:4987723 chr04:004987723 0 W/4987723-4987723 FN3663-S SNP C -> T AC=1;AN=188;BQB=0.910725;DP=2844;DP4=1382,1363,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.8783e-05;MQSB=0.996533;RPB=0.99625;SGB=26.3271;VDB=0.930257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.4:4990371 chr04:004990371 0 W/4990371-4990371 FN1236-S Single Base Substitution A-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2794-S.SNP.4:4991434 chr04:004991434 0 W/4991434-4991434 FN2794-S SNP T -> G AC=2;AN=196;BQB=0.771743;DP=4297;DP4=2128,1876,33,29;HOB=0.0201999;ICB=0.494951;MQ=31;MQ0F=0.106586;MQB=0.0494097;MQSB=0.803152;RPB=0.746964;SGB=202.552;VDB=0.339498;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.4:4991656 chr04:004991656 0 W/4991656-4991656 FN1535-S Single Base Substitution A-G INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN4030-S.SNP.4:5004163 chr04:005004163 0 W/5004163-5004163 FN4030-S SNP G -> A AC=2;AN=168;BQB=0.994857;DP=2713;DP4=1247,1365,13,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.54763e-14;MQSB=0.997883;RPB=0.692831;SGB=114.204;VDB=0.751419;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.4:5011921 chr04:005011921 0 W/5011921-5011921 FN-140 Single Base Substitution G-T INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3573-S.SNP.4:5014457 chr04:005014457 0 W/5014457-5014457 FN3573-S SNP A -> T AC=2;AN=188;BQB=0.999813;DP=2605;DP4=1286,1227,15,0;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.000383877;MQB=6.31163e-07;MQSB=1.02393e-09;RPB=0.578586;SGB=62.6088;VDB=0.0928844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.4:5015787 chr04:005015787 0 W/5015787-5015787 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.360003;DP=5027;DP4=2451,2345,10,16;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.010742;MQB=0.0667207;MQSB=1.82321e-10;RPB=0.867374;SGB=52.9314;VDB=0.970986;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.4:5019737 chr04:005019737 0 W/5019737-5019737 FN-123 Single Base Substitution C-T INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3860-S.SNP.4:5020013 chr04:005020013 0 W/5020013-5020013 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.968992;DP=2342;DP4=1178,1039,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0157985;MQB=0.0058481;MQSB=9.16471e-07;RPB=0.6725;SGB=16.7104;VDB=0.37341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.4:5023968 chr04:005023968 0 W/5023968-5023968 FN3356-S SNP T -> G AC=1;AN=184;BQB=0.740098;DP=3188;DP4=1712,1346,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.23642e-07;MQSB=0.902447;RPB=0.98889;SGB=28.7043;VDB=0.531514;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.4:5025019 chr04:005025019 0 W/5025019-5025019 FN-102 Single Base Substitution T-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2447.SNP.4:5028150 chr04:005028150 0 W/5028150-5028150 FN2447 SNP C -> A AC=1;AN=200;BQB=0.94367;DP=4344;DP4=2038,2063,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97781e-10;MQSB=0.974166;RPB=0.828561;SGB=81.8956;VDB=0.996025;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||286|LOC_Os04g09410|protein_coding|CODING|LOC_Os04g09410.1|2|1),INTRON(MODIFIER||||286|LOC_Os04g09410|protein_coding|CODING|LOC_Os04g09410.1|1|1);LOF=(LOC_Os04g09410|LOC_Os04g09410|1|1.00) FN452-S.SNP.4:5030912 chr04:005030912 0 W/5030912-5030912 FN452-S Single Base Substitution G-A INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN1229-S.SNP.4:5033893 chr04:005033893 0 W/5033893-5033893 FN1229-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN576-S.SNP.4:5042545 chr04:005042545 0 W/5042545-5042545 FN576-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1451-S.SNP.4:5043692 chr04:005043692 0 W/5043692-5043692 FN1451-S Single Base Substitution C-T INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN4071-S.SNP.4:5056913 chr04:005056913 0 W/5056913-5056913 FN4071-S SNP C -> T AC=1;AN=182;BQB=0.870316;DP=2669;DP4=1205,1384,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=2.83636e-06;MQSB=0.992519;RPB=0.86595;SGB=44.1115;VDB=0.398331;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.4:5059067 chr04:005059067 0 W/5059067-5059067 FN3537-S SNP T -> G AC=1;AN=188;BQB=0.803345;DP=2699;DP4=1370,1237,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97593e-06;MQSB=0.928189;RPB=0.875336;SGB=35.9843;VDB=0.460588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.4:5066603 chr04:005066603 0 W/5066603-5066603 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.993711;DP=2830;DP4=1390,1347,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07161e-06;MQSB=0.622002;RPB=0.545466;SGB=44.2207;VDB=0.54107;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A131T|910|LOC_Os04g09460|protein_coding|CODING|LOC_Os04g09460.1|4|1) FN952-S.SNP.4:5074540 chr04:005074540 0 W/5074540-5074540 FN952-S Single Base Substitution G-A INTRON HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN4136-S.SNP.4:5077122 chr04:005077122 0 W/5077122-5077122 FN4136-S SNP A -> G AC=1;AN=170;BQB=0.99994;DP=2392;DP4=1257,1062,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0;MQB=0.00422826;MQSB=0.000108448;RPB=0.882575;SGB=38.3207;VDB=0.511945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.4:5083404 chr04:005083404 0 W/5083404-5083404 FN3280-S SNP C -> G AC=1;AN=184;BQB=0.998596;DP=4012;DP4=2002,1901,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0877368;MQB=0.898704;MQSB=0.00124702;RPB=0.490508;SGB=89.4385;VDB=0.276897;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ctc|V162L|1472|LOC_Os04g09480|protein_coding|CODING|LOC_Os04g09480.1|1|1) FN3722-S.SNP.4:5086962 chr04:005086962 0 W/5086962-5086962 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.884454;DP=3238;DP4=1612,1503,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.377085;MQB=0.0165693;MQSB=0;RPB=0.818556;SGB=112.85;VDB=0.970652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.4:5088279 chr04:005088279 0 W/5088279-5088279 FN3779-S SNP C -> T AC=1;AN=190;BQB=0.973359;DP=2201;DP4=777,1234,8,20;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0118128;MQB=0.111584;MQSB=0.400404;RPB=0.81009;SGB=121.957;VDB=0.62217;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.4:5088566 chr04:005088566 0 W/5088566-5088566 W453-3-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g09500 retrotransposon protein, putative, unclassified SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN-54.SNP.4:5100811 chr04:005100811 0 W/5100811-5100811 FN-54 Single Base Substitution A-T INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN1656-S.SNP.4:5104950 chr04:005104950 0 W/5104950-5104950 FN1656-S Single Base Substitution T-G INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2791-S.SNP.4:5118540 chr04:005118540 0 W/5118540-5118540 FN2791-S SNP T -> A AC=1;AN=198;BQB=0.999905;DP=3936;DP4=1576,2108,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.49864e-10;MQSB=0.999688;RPB=0.760844;SGB=-37.0454;VDB=0.661911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.4:5129263 chr04:005129263 0 W/5129263-5129263 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.919944;DP=2517;DP4=1250,1190,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.22119e-05;MQSB=0.966113;RPB=0.288208;SGB=20.5959;VDB=0.0576708;EFF=INTRON(MODIFIER||||140|LOC_Os04g09550|protein_coding|CODING|LOC_Os04g09550.1|2|1) FN1134-S.SNP.4:5133669 chr04:005133669 0 W/5133669-5133669 FN1134-S Single Base Substitution C-G INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN1134-S.SNP.4:5133671 chr04:005133671 0 W/5133671-5133671 FN1134-S Single Base Substitution T-C INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN3981-S.SNP.4:5134425 chr04:005134425 0 W/5134425-5134425 FN3981-S SNP T -> C AC=1;AN=168;BQB=0.979652;DP=2268;DP4=946,1214,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0;MQB=0.205786;MQSB=0.822666;RPB=0.599008;SGB=27.8864;VDB=0.10099;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.4:5148768 chr04:005148768 0 W/5148768-5148768 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-232.SNP.4:5148769 chr04:005148769 0 W/5148769-5148769 FN-232 Single Base Substitution G-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN512-S.SNP.4:5155134 chr04:005155134 0 W/5155134-5155134 FN512-S Single Base Substitution A-C INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1287-S.SNP.4:5156198 chr04:005156198 0 W/5156198-5156198 FN1287-S Single Base Substitution G-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN4229-S.SNP.4:5157905 chr04:005157905 0 W/5157905-5157905 FN4229-S SNP C -> G AC=1;AN=170;BQB=0.964401;DP=2459;DP4=1186,1196,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.41393e-08;MQSB=0.844379;RPB=0.850609;SGB=52.3148;VDB=0.369071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.4:5162542 chr04:005162542 0 W/5162542-5162542 FN1508-S Single Base Substitution A-T INTRON HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3493-S.SNP.4:5167487 chr04:005167487 0 W/5167487-5167487 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.92969;DP=2964;DP4=1715,1187,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.49138e-08;MQSB=0.998189;RPB=0.916906;SGB=57.786;VDB=0.95886;EFF=UTR_3_PRIME(MODIFIER||228||378|LOC_Os04g09604|protein_coding|CODING|LOC_Os04g09604.1|4|1) FN3809-S.SNP.4:5172299 chr04:005172299 0 W/5172299-5172299 FN3809-S SNP G -> T AC=1;AN=190;BQB=0.750621;DP=3081;DP4=1625,1331,12,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00389484;MQB=0.0717561;MQSB=0.423173;RPB=0.879375;SGB=39.6545;VDB=0.328077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.4:5173443 chr04:005173443 0 W/5173443-5173443 FN-336 Single Base Substitution T-G INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN1916.SNP.4:5177901 chr04:005177901 0 W/5177901-5177901 FN1916 Single Base Substitution T-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN4253-S.SNP.4:5185195 chr04:005185195 0 W/5185195-5185195 FN4253-S SNP T -> C AC=1;AN=170;BQB=0.686889;DP=2317;DP4=1264,992,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.45236e-05;MQSB=0.980518;RPB=0.620865;SGB=43.4296;VDB=0.410756;EFF=INTRON(MODIFIER||||371|LOC_Os04g09654|protein_coding|CODING|LOC_Os04g09654.1|2|1),INTRON(MODIFIER||||258|LOC_Os04g09654|protein_coding|CODING|LOC_Os04g09654.2|2|1) 705-6.SNP.4:5188696 chr04:005188696 0 W/5188696-5188696 705-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN3311-S.SNP.4:5189162 chr04:005189162 0 W/5189162-5189162 FN3311-S SNP C -> T AC=2;AN=184;BQB=0.716533;DP=2415;DP4=878,1375,9,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00165631;MQB=4.45423e-16;MQSB=0.936091;RPB=0.0678011;SGB=121.091;VDB=0.704425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.4:5189162 chr04:005189162 0 W/5189162-5189162 FN3311-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN-167.SNP.4:5189255 chr04:005189255 0 W/5189255-5189255 FN-167 Single Base Substitution T-C INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-172.SNP.4:5201340 chr04:005201340 0 W/5201340-5201340 FN-172 Single Base Substitution C-A INTRON HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN-172.SNP.4:5201341 chr04:005201341 0 W/5201341-5201341 FN-172 Single Base Substitution C-T INTRON HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1422-S.SNP.4:5205191 chr04:005205191 0 W/5205191-5205191 FN1422-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os04g09710 retrotransposon protein, putative, unclassified, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1422-S.SNP.4:5205193 chr04:005205193 0 W/5205193-5205193 FN1422-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN685-S.SNP.4:5206290 chr04:005206290 0 W/5206290-5206290 FN685-S Single Base Substitution T-A INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3280-S.SNP.4:5207157 chr04:005207157 0 W/5207157-5207157 FN3280-S SNP C -> T AC=1;AN=184;BQB=0.970931;DP=2746;DP4=1412,1227,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.51094e-13;MQSB=0.996717;RPB=0.89979;SGB=38.4058;VDB=0.0740347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.4:5216224 chr04:005216224 0 W/5216224-5216224 FN3709-S SNP G -> A AC=2;AN=190;BQB=0.417386;DP=3027;DP4=1461,1430,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.0821e-10;MQSB=0.91643;RPB=0.581084;SGB=18.096;VDB=0.673544;EFF=INTRON(MODIFIER||||467|LOC_Os04g09720|protein_coding|CODING|LOC_Os04g09720.1|1|1),INTRON(MODIFIER||||467|LOC_Os04g09720|protein_coding|CODING|LOC_Os04g09720.2|1|1) FN2584-S.SNP.4:5216302 chr04:005216302 0 W/5216302-5216302 FN2584-S SNP C -> A AC=1;AN=198;BQB=0.988675;DP=4180;DP4=1946,2047,14,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.02456e-17;MQSB=0.935286;RPB=0.960557;SGB=136.856;VDB=0.159987;EFF=INTRON(MODIFIER||||467|LOC_Os04g09720|protein_coding|CODING|LOC_Os04g09720.1|1|1),INTRON(MODIFIER||||467|LOC_Os04g09720|protein_coding|CODING|LOC_Os04g09720.2|1|1) FN2546-S.SNP.4:5218008 chr04:005218008 0 W/5218008-5218008 FN2546-S SNP C -> G AC=2;AN=198;BQB=0.986044;DP=4662;DP4=2275,2119,13,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.10592e-16;MQSB=0.986578;RPB=0.957904;SGB=57.8907;VDB=0.495302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.4:5219199 chr04:005219199 0 W/5219199-5219199 FN1721-S SNP T -> A AC=2;AN=188;BQB=0.370274;DP=3767;DP4=1862,1850,15,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.67428e-19;MQSB=0.153688;RPB=0.480515;SGB=47.2072;VDB=0.184646;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.4:5220045 chr04:005220045 0 W/5220045-5220045 FN4206-S SNP T -> C AC=1;AN=170;BQB=0.789005;DP=2458;DP4=1210,1176,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05085e-08;MQSB=0.987547;RPB=0.0209627;SGB=48.6486;VDB=0.0396698;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.4:5222379 chr04:005222379 0 W/5222379-5222379 FN1468-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g09730 retrotransposon protein, putative, unclassified SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. W450-6-1.SNP.4:5224748 chr04:005224748 0 W/5224748-5224748 W450-6-1 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os04g09740 transposon protein, putative, Pong sub-class, expressed SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2128-S.SNP.4:5227345 chr04:005227345 0 W/5227345-5227345 FN2128-S SNP G -> C AC=2;AN=168;BQB=0.998492;DP=3345;DP4=1701,1584,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.16895e-14;MQSB=0.837083;RPB=0.991639;SGB=25.6529;VDB=0.125257;EFF=INTRON(MODIFIER||||300|LOC_Os04g09750|protein_coding|CODING|LOC_Os04g09750.1|1|1) FN1236-S.SNP.4:5233792 chr04:005233792 0 W/5233792-5233792 FN1236-S Single Base Substitution T-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN4314-S.SNP.4:5236099 chr04:005236099 0 W/5236099-5236099 FN4314-S SNP G -> A AC=2;AN=170;BQB=0.911659;DP=2422;DP4=1276,1042,16,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.24273e-19;MQSB=0.986589;RPB=0.684219;SGB=114.059;VDB=0.982795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.4:5237902 chr04:005237902 0 W/5237902-5237902 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.352478;DP=4565;DP4=2309,2066,20,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4983e-19;MQSB=0.971123;RPB=0.906079;SGB=101.557;VDB=0.502027;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.4:5238881 chr04:005238881 0 W/5238881-5238881 FN4039-S SNP A -> T AC=1;AN=168;BQB=0.998538;DP=3034;DP4=1543,1382,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.4863e-10;MQSB=0.816081;RPB=0.996101;SGB=58.7637;VDB=0.179763;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.4:5245748 chr04:005245748 0 W/5245748-5245748 FN-341 Single Base Substitution T-C INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2106-S.SNP.4:5251262 chr04:005251262 0 W/5251262-5251262 FN2106-S SNP A -> G AC=1;AN=168;BQB=0.106232;DP=3693;DP4=2029,1628,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.55548e-08;MQSB=0.531741;RPB=0.415049;SGB=-42.3508;VDB=0.114216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.4:5261918 chr04:005261918 0 W/5261918-5261918 FN1753-S SNP G -> A AC=1;AN=188;BQB=2.50873e-07;DP=3969;DP4=1849,2037,10,23;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000116312;MQSB=0.989302;RPB=0.402621;SGB=-418.681;VDB=0.82426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.4:5264337 chr04:005264337 0 W/5264337-5264337 FN3767-S SNP T -> C AC=2;AN=190;BQB=0.986091;DP=2721;DP4=1392,1224,12,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.04971e-19;MQSB=0.999983;RPB=0.521887;SGB=140.173;VDB=0.367561;EFF=UTR_3_PRIME(MODIFIER||432||404|LOC_Os04g09810|protein_coding|CODING|LOC_Os04g09810.1|3|1) W591-4-1.SNP.4:5267880 chr04:005267880 0 W/5267880-5267880 W591-4-1 Single Base Substitution C-T INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2479.SNP.4:5268243 chr04:005268243 0 W/5268243-5268243 FN2479 SNP A -> T AC=1;AN=200;BQB=0.954986;DP=4368;DP4=2320,1804,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86554e-09;MQSB=0.998426;RPB=0.371373;SGB=77.2904;VDB=0.949234;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.4:5274695 chr04:005274695 0 W/5274695-5274695 FN445-S Single Base Substitution A-C INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1290-S.SNP.4:5285113 chr04:005285113 0 W/5285113-5285113 FN1290-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g09840 retrotransposon protein, putative, unclassified, expressed SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN-51.SNP.4:5291051 chr04:005291051 0 W/5291051-5291051 FN-51 Single Base Substitution C-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.4:5291051 chr04:005291051 0 W/5291051-5291051 FN-51 Single Base Substitution C-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3693-S.SNP.4:5307662 chr04:005307662 0 W/5307662-5307662 FN3693-S SNP C -> T AC=1;AN=190;BQB=0.996181;DP=1876;DP4=1010,769,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49336e-05;MQSB=0.974076;RPB=0.357973;SGB=39.9877;VDB=0.0369482;EFF=INTRON(MODIFIER||||84|LOC_Os04g09870|protein_coding|CODING|LOC_Os04g09870.1|1|1) FN2366.SNP.4:5311752 chr04:005311752 0 W/5311752-5311752 FN2366 SNP T -> G AC=1;AN=192;BQB=0.246668;DP=4389;DP4=1927,2049,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.99673e-11;MQSB=0.764514;RPB=0.105893;SGB=-38.813;VDB=0.417198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Gcc|S88A|282|LOC_Os04g09880|protein_coding|CODING|LOC_Os04g09880.1|2|1) FN1272-S.SNP.4:5312729 chr04:005312729 0 W/5312729-5312729 FN1272-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g09880 expressed protein SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1515-S.SNP.4:5314405 chr04:005314405 0 W/5314405-5314405 FN1515-S Single Base Substitution A-G INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN772-S.SNP.4:5317846 chr04:005317846 0 W/5317846-5317846 FN772-S Single Base Substitution C-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN260-S.SNP.4:5321588 chr04:005321588 0 W/5321588-5321588 FN260-S Single Base Substitution G-C INTRON HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN4098-S.SNP.4:5321588 chr04:005321588 0 W/5321588-5321588 FN4098-S SNP G -> C AC=2;AN=182;BQB=0.960212;DP=3027;DP4=1626,1286,12,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.35785e-16;MQSB=0.951691;RPB=0.882531;SGB=95.3123;VDB=0.125648;EFF=INTRON(MODIFIER||||504|LOC_Os04g09900|protein_coding|CODING|LOC_Os04g09900.3|1|1),INTRON(MODIFIER||||767|LOC_Os04g09900|protein_coding|CODING|LOC_Os04g09900.1|5|1),INTRON(MODIFIER||||721|LOC_Os04g09900|protein_coding|CODING|LOC_Os04g09900.2|4|1) FN3550-S.SNP.4:5338729 chr04:005338729 0 W/5338729-5338729 FN3550-S SNP C -> A AC=1;AN=188;BQB=0.929004;DP=4322;DP4=2365,1854,15,15;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0726516;MQB=8.66392e-06;MQSB=0.000313112;RPB=0.119054;SGB=61.6823;VDB=0.406344;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.4:5344535 chr04:005344535 0 W/5344535-5344535 FN911-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g09940 retrotransposon protein, putative, unclassified SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2267-S.SNP.4:5351886 chr04:005351886 0 W/5351886-5351886 FN2267-S SNP A -> T AC=1;AN=190;BQB=0.904863;DP=5005;DP4=2373,2265,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36764e-10;MQSB=0.961841;RPB=0.333313;SGB=41.5369;VDB=0.90356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.4:5355804 chr04:005355804 0 W/5355804-5355804 FN3378-S SNP C -> T AC=1;AN=184;BQB=0.9084;DP=3496;DP4=1467,1926,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.16218e-09;MQSB=0.934992;RPB=0.843488;SGB=39.2697;VDB=0.176106;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.4:5359564 chr04:005359564 0 W/5359564-5359564 FN3596-S SNP C -> T AC=1;AN=188;BQB=0.988575;DP=3066;DP4=1804,1206,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.46506e-15;MQSB=0.998271;RPB=0.940823;SGB=103.498;VDB=0.122281;EFF=INTRON(MODIFIER||||154|LOC_Os04g09960|protein_coding|CODING|LOC_Os04g09960.1|2|1) FN3374-S.SNP.4:5372430 chr04:005372430 0 W/5372430-5372430 FN3374-S SNP C -> T AC=1;AN=184;BQB=0.93046;DP=3936;DP4=1847,1936,13,27;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.514228;MQB=2.57054e-05;MQSB=0;RPB=0.999995;SGB=130.836;VDB=0.910056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1456C|1489|LOC_Os04g09980|protein_coding|CODING|LOC_Os04g09980.1|11|1) FN1315-S.SNP.4:5374907 chr04:005374907 0 W/5374907-5374907 FN1315-S Single Base Substitution C-T INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN483-S.SNP.4:5376548 chr04:005376548 0 W/5376548-5376548 FN483-S Single Base Substitution C-T INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1634-S.SNP.4:5384199 chr04:005384199 0 W/5384199-5384199 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN949-S.SNP.4:5386498 chr04:005386498 0 W/5386498-5386498 FN949-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN3366-S.SNP.4:5401752 chr04:005401752 0 W/5401752-5401752 FN3366-S SNP G -> T AC=1;AN=184;BQB=0.968127;DP=3588;DP4=1816,1595,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0401338;MQB=0.406839;MQSB=8.50355e-20;RPB=0.984386;SGB=66.8296;VDB=0.782719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.4:5402879 chr04:005402879 0 W/5402879-5402879 FN2373 SNP G -> A AC=1;AN=192;BQB=0.891384;DP=4866;DP4=2257,2242,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00390464;MQB=6.02006e-11;MQSB=0.755156;RPB=0.82759;SGB=108.547;VDB=0.282338;EFF=INTRON(MODIFIER||||155|LOC_Os04g10040|protein_coding|CODING|LOC_Os04g10040.1|1|1) FN3431-S.SNP.4:5409225 chr04:005409225 0 W/5409225-5409225 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.997658;DP=3341;DP4=1349,1893,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.124214;MQB=0.94708;MQSB=0.429684;RPB=0.999996;SGB=49.835;VDB=0.143584;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.4:5414992 chr04:005414992 0 W/5414992-5414992 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.913924;DP=2660;DP4=1457,915,17,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.50781e-11;MQSB=0.0810788;RPB=0.662525;SGB=-64.7645;VDB=0.800683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.4:5418115 chr04:005418115 0 W/5418115-5418115 FN2353 SNP G -> C AC=2;AN=192;BQB=0.945838;DP=4855;DP4=2388,2084,25,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.07406e-27;MQSB=0.992695;RPB=0.0934228;SGB=-51.0113;VDB=6.36936e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.4:5418157 chr04:005418157 0 W/5418157-5418157 FN1746-S SNP G -> A AC=1;AN=188;BQB=0.700694;DP=3771;DP4=1936,1776,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.64928e-14;MQSB=0.968278;RPB=0.566195;SGB=46.4225;VDB=0.334656;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.4:5420984 chr04:005420984 0 W/5420984-5420984 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2199-S.SNP.4:5426692 chr04:005426692 0 W/5426692-5426692 FN2199-S SNP T -> A AC=1;AN=190;BQB=0.726062;DP=5021;DP4=2526,2238,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199164;MQB=4.28997e-08;MQSB=0.228938;RPB=0.823399;SGB=4.11112;VDB=0.889314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.4:5431882 chr04:005431882 0 W/5431882-5431882 FN3807-S SNP A -> G AC=1;AN=190;BQB=0.999966;DP=2914;DP4=1269,1532,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77595e-10;MQSB=0.984998;RPB=0.566435;SGB=76.4186;VDB=0.0487435;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P219|842|LOC_Os04g10060|protein_coding|CODING|LOC_Os04g10060.1|4|1) FN995-S.SNP.4:5433007 chr04:005433007 0 W/5433007-5433007 FN995-S Single Base Substitution T-A INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN2689-S.SNP.4:5434299 chr04:005434299 0 W/5434299-5434299 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.83958;DP=4985;DP4=2698,2064,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25125e-10;MQSB=0.953776;RPB=0.816364;SGB=47.4799;VDB=0.917495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.4:5436080 chr04:005436080 0 W/5436080-5436080 FN2538-S SNP G -> T AC=1;AN=198;BQB=0.950604;DP=4239;DP4=1999,2019,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.9729e-08;MQSB=0.893348;RPB=0.85359;SGB=32.9588;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.4:5437650 chr04:005437650 0 W/5437650-5437650 FN1205-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g10070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2207-S.SNP.4:5442272 chr04:005442272 0 W/5442272-5442272 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.996691;DP=4314;DP4=1983,2002,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41108e-10;MQSB=0.773053;RPB=0.872504;SGB=60.9777;VDB=0.564262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.4:5447434 chr04:005447434 0 W/5447434-5447434 FN2081-S SNP C -> T AC=2;AN=168;BQB=0.124739;DP=2688;DP4=864,1776,0,25;HOB=0.0235261;ICB=0.494119;MQ=22;MQ0F=0.427083;MQB=0.00738826;MQSB=0;RPB=0.670863;SGB=17.068;VDB=0.253381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.4:5449734 chr04:005449734 0 W/5449734-5449734 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.720158;DP=1958;DP4=1110,731,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.114402;MQB=0.4626;MQSB=0.00112891;RPB=0.979879;SGB=32.2261;VDB=0.0797556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.4:5450467 chr04:005450467 0 W/5450467-5450467 FN1618-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g10100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3285-S.SNP.4:5453367 chr04:005453367 0 W/5453367-5453367 FN3285-S SNP A -> G AC=1;AN=184;BQB=0.9984;DP=5394;DP4=2881,2191,12,17;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0806452;MQB=0.621869;MQSB=0.872207;RPB=0.577869;SGB=25.0638;VDB=0.189997;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D778|1804|LOC_Os04g10100|protein_coding|CODING|LOC_Os04g10100.1|3|1) FN4135-S.SNP.4:5459518 chr04:005459518 0 W/5459518-5459518 FN4135-S SNP G -> A AC=2;AN=182;BQB=0.98984;DP=3343;DP4=1323,1933,11,27;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=3.45056e-13;MQSB=6.90741e-09;RPB=0.925162;SGB=165.905;VDB=0.244432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.4:5461058 chr04:005461058 0 W/5461058-5461058 FN1379-S Single Base Substitution A-T INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1379-S.SNP.4:5461059 chr04:005461059 0 W/5461059-5461059 FN1379-S Single Base Substitution C-T INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-5.SNP.4:5462444 chr04:005462444 0 W/5462444-5462444 FN-5 Single Base Substitution T-A INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN-5.SNP.4:5462445 chr04:005462445 0 W/5462445-5462445 FN-5 Single Base Substitution C-A INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN1465-S.SNP.4:5465355 chr04:005465355 0 W/5465355-5465355 FN1465-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g10120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1692-S.SNP.4:5467693 chr04:005467693 0 W/5467693-5467693 FN1692-S SNP G -> T AC=2;AN=188;BQB=0.0395314;DP=3018;DP4=1265,1708,13,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.11049e-16;MQSB=0.987858;RPB=0.441534;SGB=31.7742;VDB=0.911993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.4:5467694 chr04:005467694 0 W/5467694-5467694 FN1692-S SNP T -> C AC=2;AN=188;BQB=0.236863;DP=3020;DP4=1263,1714,18,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.70083e-16;MQSB=0.983104;RPB=0.981424;SGB=-44.2151;VDB=0.943345;EFF=INTERGENIC(MODIFIER||||||||||1) 702-6.SNP.4:5474569 chr04:005474569 0 W/5474569-5474569 702-6 Single Base Substitution T-C INTERGENIC Homo SNo: 1447, Mutant_ID: 702-6, Generation: M2, Mutations: 26, Genes: 20, Seed availability: Yes. FN-119.SNP.4:5475218 chr04:005475218 0 W/5475218-5475218 FN-119 Single Base Substitution C-A INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3442-S.SNP.4:5481404 chr04:005481404 0 W/5481404-5481404 FN3442-S SNP G -> A AC=1;AN=184;BQB=0.853747;DP=2483;DP4=1030,1177,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.85772e-05;MQSB=0.468472;RPB=0.681499;SGB=-17.8447;VDB=0.996745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.4:5486302 chr04:005486302 0 W/5486302-5486302 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.709863;DP=2617;DP4=1239,1293,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00731471;MQSB=0.893655;RPB=0.99948;SGB=14.7784;VDB=0.846879;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S454T|532|LOC_Os04g10160|protein_coding|CODING|LOC_Os04g10160.1|2|1) FN-167.SNP.4:5497576 chr04:005497576 0 W/5497576-5497576 FN-167 Single Base Substitution A-C INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2338.SNP.4:5498678 chr04:005498678 0 W/5498678-5498678 FN2338 SNP G -> A AC=1;AN=192;BQB=0.945633;DP=4752;DP4=2174,2124,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.46729e-13;MQSB=0.967275;RPB=0.822331;SGB=82.5522;VDB=0.0476245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.4:5498987 chr04:005498987 0 W/5498987-5498987 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.926035;DP=4529;DP4=2244,2026,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.59329e-12;MQSB=0.463855;RPB=0.664524;SGB=79.6954;VDB=0.420694;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.4:5500183 chr04:005500183 0 W/5500183-5500183 FN360-S Single Base Substitution A-G INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1154-S.SNP.4:5503851 chr04:005503851 0 W/5503851-5503851 FN1154-S Single Base Substitution T-G INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN778-S.SNP.4:5519135 chr04:005519135 0 W/5519135-5519135 FN778-S Single Base Substitution A-T INTRON HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN778-S.SNP.4:5519138 chr04:005519138 0 W/5519138-5519138 FN778-S Single Base Substitution A-T INTRON HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1287-S.SNP.4:5519339 chr04:005519339 0 W/5519339-5519339 FN1287-S Single Base Substitution G-A INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2375.SNP.4:5524922 chr04:005524922 0 W/5524922-5524922 FN2375 SNP A -> C AC=2;AN=192;BQB=0.951262;DP=4745;DP4=2195,2305,9,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.61221e-19;MQSB=0.475727;RPB=0.894168;SGB=103.938;VDB=0.0152472;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.4:5526101 chr04:005526101 0 W/5526101-5526101 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.000561551;DP=4364;DP4=1872,1697,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000458295;MQB=7.5474e-06;MQSB=0.024115;RPB=0.463803;SGB=-143.621;VDB=0.322596;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.4:5528671 chr04:005528671 0 W/5528671-5528671 FN799-S Single Base Substitution A-T INTRON HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN3938-S.SNP.4:5530490 chr04:005530490 0 W/5530490-5530490 FN3938-S SNP C -> A AC=1;AN=158;BQB=0.710986;DP=2822;DP4=1479,1230,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.03227e-06;MQSB=0.778644;RPB=0.820225;SGB=27.3346;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.4:5530741 chr04:005530741 0 W/5530741-5530741 FN1394-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN318-S.SNP.4:5532590 chr04:005532590 0 W/5532590-5532590 FN318-S Single Base Substitution G-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3293-S.SNP.4:5534426 chr04:005534426 0 W/5534426-5534426 FN3293-S SNP A -> C AC=1;AN=184;BQB=0.490615;DP=2851;DP4=1578,1178,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.1187e-07;MQSB=0.836355;RPB=0.328207;SGB=5.28054;VDB=0.974688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.4:5534748 chr04:005534748 0 W/5534748-5534748 FN2211-S SNP T -> C AC=1;AN=190;BQB=0.959274;DP=4924;DP4=2123,2311,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203087;MQB=1.31316e-14;MQSB=0.134913;RPB=0.956387;SGB=85.8548;VDB=0.787068;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.4:5561858 chr04:005561858 0 W/5561858-5561858 FN830-S Single Base Substitution G-A INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN776-S.SNP.4:5568870 chr04:005568870 0 W/5568870-5568870 FN776-S Single Base Substitution A-C INTRON HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN581-S.SNP.4:5576294 chr04:005576294 0 W/5576294-5576294 FN581-S Single Base Substitution G-C INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN928-S.SNP.4:5580144 chr04:005580144 0 W/5580144-5580144 FN928-S Single Base Substitution A-G INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2315.SNP.4:5580926 chr04:005580926 0 W/5580926-5580926 FN2315 SNP C -> T AC=1;AN=192;BQB=0.94633;DP=5284;DP4=2593,2396,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000189251;MQB=3.19033e-09;MQSB=1.79291e-05;RPB=0.782626;SGB=64.7304;VDB=0.962332;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.4:5581812 chr04:005581812 0 W/5581812-5581812 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3674-S.SNP.4:5589546 chr04:005589546 0 W/5589546-5589546 FN3674-S SNP G -> A AC=1;AN=190;BQB=0.945466;DP=3247;DP4=1624,1481,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.49742e-08;MQSB=0.956845;RPB=0.482481;SGB=67.3108;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.4:5594785 chr04:005594785 0 W/5594785-5594785 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN414-S.SNP.4:5609214 chr04:005609214 0 W/5609214-5609214 FN414-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g10380 glycine-rich protein, putative, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN414-S.SNP.4:5609215 chr04:005609215 0 W/5609215-5609215 FN414-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g10380 glycine-rich protein, putative, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN4046-S.SNP.4:5613736 chr04:005613736 0 W/5613736-5613736 FN4046-S SNP G -> A AC=2;AN=168;BQB=0.770819;DP=2336;DP4=1130,1092,14,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.11843e-11;MQSB=0.944596;RPB=0.999835;SGB=39.2004;VDB=0.533198;EFF=INTRON(MODIFIER||||1436|LOC_Os04g10380|protein_coding|CODING|LOC_Os04g10380.1|3|1) FN3855-S.SNP.4:5621150 chr04:005621150 0 W/5621150-5621150 FN3855-S SNP A -> T AC=1;AN=158;BQB=0.936384;DP=2188;DP4=986,1085,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.66055e-06;MQSB=0.839297;RPB=0.0422214;SGB=42.6978;VDB=0.0176123;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N697Y|1436|LOC_Os04g10380|protein_coding|CODING|LOC_Os04g10380.1|11|1) FN410-S.SNP.4:5621693 chr04:005621693 0 W/5621693-5621693 FN410-S Single Base Substitution G-A INTRON HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN961-S.SNP.4:5622410 chr04:005622410 0 W/5622410-5622410 FN961-S Single Base Substitution C-T INTRON HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3326-S.SNP.4:5627484 chr04:005627484 0 W/5627484-5627484 FN3326-S SNP G -> A AC=1;AN=184;BQB=0.497989;DP=2688;DP4=1158,1454,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.09915e-08;MQSB=0.986322;RPB=0.947743;SGB=39.2697;VDB=0.871028;EFF=INTRON(MODIFIER||||1436|LOC_Os04g10380|protein_coding|CODING|LOC_Os04g10380.1|20|1) FN1198-S.SNP.4:5632033 chr04:005632033 0 W/5632033-5632033 FN1198-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN511-S.SNP.4:5633547 chr04:005633547 0 W/5633547-5633547 FN511-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g10390 transposon protein, putative, unclassified, expressed SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1136-19-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN1136-19-S Single Base Substitution T-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1136-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN1136-S Single Base Substitution T-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1730-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN1730-S SNP T -> A AC=2;AN=188;BQB=0.53738;DP=3042;DP4=1382,1584,15,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.60763e-09;MQSB=0.996682;RPB=0.436517;SGB=-41.0182;VDB=0.858199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3542-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN3542-S SNP T -> A AC=2;AN=188;BQB=0.807434;DP=2777;DP4=1426,1250,15,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.71688e-16;MQSB=0.989697;RPB=0.969933;SGB=121.672;VDB=0.0859765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN3811-S SNP T -> A AC=2;AN=190;BQB=0.630767;DP=2629;DP4=1300,1204,24,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.22817e-16;MQSB=0.999013;RPB=0.451345;SGB=121.394;VDB=0.400742;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN705-S Single Base Substitution T-A INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN830-S.SNP.4:5642611 chr04:005642611 0 W/5642611-5642611 FN830-S Single Base Substitution T-A INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN3301-S.SNP.4:5652800 chr04:005652800 0 W/5652800-5652800 FN3301-S SNP G -> T AC=2;AN=184;BQB=0.99035;DP=3260;DP4=1571,1541,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.64375e-14;MQSB=0.903655;RPB=0.983665;SGB=116.569;VDB=0.780517;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.4:5656816 chr04:005656816 0 W/5656816-5656816 FN-133 Single Base Substitution T-C INTRON HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN1006-S.SNP.4:5659153 chr04:005659153 0 W/5659153-5659153 FN1006-S Single Base Substitution C-T INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1480-S.SNP.4:5659729 chr04:005659729 0 W/5659729-5659729 FN1480-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1006-S.SNP.4:5660967 chr04:005660967 0 W/5660967-5660967 FN1006-S Single Base Substitution T-A INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2088-S.SNP.4:5661918 chr04:005661918 0 W/5661918-5661918 FN2088-S SNP G -> A AC=2;AN=168;BQB=0.181502;DP=3215;DP4=1051,2100,12,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.15832e-17;MQSB=0.99482;RPB=0.822479;SGB=-183.594;VDB=0.0749279;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C159|405|LOC_Os04g10420|protein_coding|CODING|LOC_Os04g10420.1|5|1) FN2292.SNP.4:5665310 chr04:005665310 0 W/5665310-5665310 FN2292 SNP A -> G AC=1;AN=192;BQB=0.990424;DP=4846;DP4=2338,2279,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.74023e-12;MQSB=0.84476;RPB=0.561;SGB=44.3;VDB=0.570354;EFF=INTRON(MODIFIER||||405|LOC_Os04g10420|protein_coding|CODING|LOC_Os04g10420.1|1|1) FN2324.SNP.4:5670323 chr04:005670323 0 W/5670323-5670323 FN2324 SNP T -> A AC=1;AN=192;BQB=0.695547;DP=5204;DP4=1987,2929,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64427e-15;MQSB=0.993722;RPB=0.889644;SGB=51.9931;VDB=0.728116;EFF=INTRON(MODIFIER||||316|LOC_Os04g10434|protein_coding|CODING|LOC_Os04g10434.1|1|1) FN2324.SNP.4:5670324 chr04:005670324 0 W/5670324-5670324 FN2324 SNP T -> C AC=1;AN=192;BQB=0.768048;DP=5211;DP4=2041,2947,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.65997e-15;MQSB=0.934847;RPB=0.998693;SGB=51.9931;VDB=0.705001;EFF=INTRON(MODIFIER||||316|LOC_Os04g10434|protein_coding|CODING|LOC_Os04g10434.1|1|1) FN2708-S.SNP.4:5671278 chr04:005671278 0 W/5671278-5671278 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.94096;DP=5058;DP4=2502,2340,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000197707;MQB=3.11259e-09;MQSB=0.989035;RPB=0.45088;SGB=61.9006;VDB=0.241953;EFF=INTRON(MODIFIER||||316|LOC_Os04g10434|protein_coding|CODING|LOC_Os04g10434.1|1|1) FN3579-S.SNP.4:5676062 chr04:005676062 0 W/5676062-5676062 FN3579-S SNP G -> C AC=1;AN=188;BQB=0.906793;DP=2857;DP4=1495,1301,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000212026;MQSB=0.94055;RPB=0.519605;SGB=30.8063;VDB=0.907331;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.4:5687399 chr04:005687399 0 W/5687399-5687399 FN404-S Single Base Substitution A-G INTRON HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN-265.SNP.4:5687698 chr04:005687698 0 W/5687698-5687698 FN-265 Single Base Substitution A-C INTRON HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN457-S.SNP.4:5690298 chr04:005690298 0 W/5690298-5690298 FN457-S Single Base Substitution G-A INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN2408.SNP.4:5692057 chr04:005692057 0 W/5692057-5692057 FN2408 SNP A -> C AC=1;AN=200;BQB=0.483627;DP=5222;DP4=2043,2701,7,14;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0112984;MQB=0.0288393;MQSB=1.66569e-13;RPB=0.624629;SGB=91.1059;VDB=0.379301;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.4:5706333 chr04:005706333 0 W/5706333-5706333 FN1097-S Single Base Substitution G-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1255-S.SNP.4:5707434 chr04:005707434 0 W/5707434-5707434 FN1255-S Single Base Substitution G-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1416-S.SNP.4:5707877 chr04:005707877 0 W/5707877-5707877 FN1416-S Single Base Substitution A-G INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3569-S.SNP.4:5709717 chr04:005709717 0 W/5709717-5709717 FN3569-S SNP T -> G AC=1;AN=188;BQB=0.932553;DP=2785;DP4=1436,1260,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.10607e-14;MQSB=0.921019;RPB=0.669079;SGB=94.4119;VDB=0.532082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.4:5711000 chr04:005711000 0 W/5711000-5711000 FN1494-S Single Base Substitution A-G INTERGENIC Homo SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4148-S.SNP.4:5711000 chr04:005711000 0 W/5711000-5711000 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.999909;DP=2492;DP4=1206,1151,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.92047e-06;MQSB=0.811713;RPB=0.996892;SGB=43.4296;VDB=0.825615;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.4:5711000 chr04:005711000 0 W/5711000-5711000 FN896-S Single Base Substitution A-G INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN950-S.SNP.4:5711000 chr04:005711000 0 W/5711000-5711000 FN950-S Single Base Substitution A-G INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. W475-4-2.SNP.4:5714922 chr04:005714922 0 W/5714922-5714922 W475-4-2 Single Base Substitution G-A INTERGENIC HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN2472.SNP.4:5716966 chr04:005716966 0 W/5716966-5716966 FN2472 SNP A -> G AC=2;AN=200;BQB=0.852821;DP=4802;DP4=1967,2149,24,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00229071;MQB=1.24154e-10;MQSB=0.00239812;RPB=0.404036;SGB=49.6192;VDB=0.648321;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.4:5718644 chr04:005718644 0 W/5718644-5718644 FN-166 Single Base Substitution C-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3789-S.SNP.4:5719742 chr04:005719742 0 W/5719742-5719742 FN3789-S SNP C -> T AC=1;AN=190;BQB=0.903917;DP=2661;DP4=1264,1294,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.72886e-06;MQSB=0.876715;RPB=0.48373;SGB=18.552;VDB=0.893839;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.4:5722265 chr04:005722265 0 W/5722265-5722265 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.75304;DP=4312;DP4=1929,2199,2,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.05561e-08;MQSB=0.998281;RPB=0.996781;SGB=-0.221308;VDB=0.771088;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.4:5722305 chr04:005722305 0 W/5722305-5722305 FN-155 Single Base Substitution A-C INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN4094-S.SNP.4:5722884 chr04:005722884 0 W/5722884-5722884 FN4094-S SNP C -> A AC=1;AN=182;BQB=0.979649;DP=2786;DP4=1001,1654,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.88117e-05;MQSB=0.0139334;RPB=0.971887;SGB=39.6007;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.4:5727381 chr04:005727381 0 W/5727381-5727381 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.86427;DP=2886;DP4=1597,1140,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.18389e-06;MQSB=0.996807;RPB=0.418997;SGB=13.4442;VDB=0.450112;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.4:5731099 chr04:005731099 0 W/5731099-5731099 FN682-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN1463-S.SNP.4:5739657 chr04:005739657 0 W/5739657-5739657 FN1463-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g10569 glutamyl-tRNA amidotransferase, putative, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2200-S.SNP.4:5741262 chr04:005741262 0 W/5741262-5741262 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.94999;DP=5031;DP4=2207,2523,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0465116;MQB=0.0195249;MQSB=2.4279e-14;RPB=0.607477;SGB=-8.23709;VDB=0.907142;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.4:5746793 chr04:005746793 0 W/5746793-5746793 FN792-S Single Base Substitution T-C INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN229-S.SNP.4:5750223 chr04:005750223 0 W/5750223-5750223 FN229-S Single Base Substitution T-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN531-S.SNP.4:5751381 chr04:005751381 0 W/5751381-5751381 FN531-S Single Base Substitution C-A INTERGENIC HET SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN3710-S.SNP.4:5751437 chr04:005751437 0 W/5751437-5751437 FN3710-S SNP C -> A AC=1;AN=190;BQB=0.733634;DP=2738;DP4=1357,1267,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00766983;MQB=0.337552;MQSB=0.890108;RPB=0.431597;SGB=21.8853;VDB=0.560035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.4:5754895 chr04:005754895 0 W/5754895-5754895 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.966676;DP=5367;DP4=2632,2462,6,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000372648;MQB=8.47468e-06;MQSB=0.725341;RPB=0.976442;SGB=25.849;VDB=0.402583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.4:5755066 chr04:005755066 0 W/5755066-5755066 FN2214-S SNP A -> T AC=1;AN=190;BQB=0.63726;DP=4633;DP4=1949,2396,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00518023;MQB=0.98774;MQSB=0.485701;RPB=0.656889;SGB=71.8647;VDB=0.0369986;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.4:5757085 chr04:005757085 0 W/5757085-5757085 FN939-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g10600 expressed protein SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN3503-S.SNP.4:5762559 chr04:005762559 0 W/5762559-5762559 FN3503-S SNP C -> T AC=2;AN=188;BQB=0.585298;DP=3107;DP4=1510,1523,12,3;HOB=0.0210502;ICB=0.494738;MQ=20;MQ0F=0.407467;MQB=0.064594;MQSB=0;RPB=0.692085;SGB=62.6088;VDB=0.303795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S70N|1031|LOC_Os04g10610|protein_coding|CODING|LOC_Os04g10610.1|1|1) FN581-S.SNP.4:5775169 chr04:005775169 0 W/5775169-5775169 FN581-S Single Base Substitution C-T INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1241-S.SNP.4:5776616 chr04:005776616 0 W/5776616-5776616 FN1241-S Single Base Substitution G-C INTRON HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-384.SNP.4:5779876 chr04:005779876 0 W/5779876-5779876 FN-384 Single Base Substitution T-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN2450.SNP.4:5780962 chr04:005780962 0 W/5780962-5780962 FN2450 SNP T -> C AC=1;AN=200;BQB=0.991636;DP=4424;DP4=2004,2003,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03166e-07;MQSB=0.882625;RPB=0.978077;SGB=58.8698;VDB=0.656765;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.4:5783594 chr04:005783594 0 W/5783594-5783594 FN-268 Single Base Substitution A-C INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2687-S.SNP.4:5790280 chr04:005790280 0 W/5790280-5790280 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.634162;DP=4852;DP4=2236,2331,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.28667e-08;MQSB=0.999909;RPB=0.999729;SGB=16.4591;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.4:5796294 chr04:005796294 0 W/5796294-5796294 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.748329;DP=4849;DP4=2142,2320,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.09286e-19;MQSB=0.564774;RPB=0.898843;SGB=101.557;VDB=0.376522;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.4:5809703 chr04:005809703 0 W/5809703-5809703 FN4152-S SNP G -> A AC=2;AN=170;BQB=0.976133;DP=2486;DP4=1137,1280,15,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.27343e-14;MQSB=0.992298;RPB=0.720266;SGB=114.512;VDB=0.19714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R597H|709|LOC_Os04g10680|protein_coding|CODING|LOC_Os04g10680.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R597H|709|LOC_Os04g10680|protein_coding|CODING|LOC_Os04g10680.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R597H|709|LOC_Os04g10680|protein_coding|CODING|LOC_Os04g10680.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R597H|709|LOC_Os04g10680|protein_coding|CODING|LOC_Os04g10680.4|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R597H|709|LOC_Os04g10680|protein_coding|CODING|LOC_Os04g10680.5|4|1) FN-234.SNP.4:5810741 chr04:005810741 0 W/5810741-5810741 FN-234 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-234.SNP.4:5810755 chr04:005810755 0 W/5810755-5810755 FN-234 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2779-S.SNP.4:5814939 chr04:005814939 0 W/5814939-5814939 FN2779-S SNP A -> T AC=1;AN=198;BQB=0.770901;DP=3802;DP4=1938,1650,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.87939e-11;MQSB=0.975509;RPB=0.880265;SGB=39.7248;VDB=0.411302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.4:5819742 chr04:005819742 0 W/5819742-5819742 FN3548-S SNP T -> A AC=2;AN=188;BQB=0.879579;DP=3682;DP4=1881,1590,21,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.14209e-23;MQSB=0.802414;RPB=0.230783;SGB=0.755789;VDB=0.663187;EFF=INTRON(MODIFIER||||1013|LOC_Os04g10700|protein_coding|CODING|LOC_Os04g10700.1|4|1) FN1679-S.SNP.4:5822614 chr04:005822614 0 W/5822614-5822614 FN1679-S SNP T -> C AC=2;AN=188;BQB=0.262626;DP=2761;DP4=1277,1420,22,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05383e-18;MQSB=0.963019;RPB=0.948304;SGB=-1.96068;VDB=0.289904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.4:5827831 chr04:005827831 0 W/5827831-5827831 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.818953;DP=4677;DP4=2237,2204,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.10126e-16;MQSB=0.922572;RPB=0.11325;SGB=87.1368;VDB=0.319475;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.4:5829862 chr04:005829862 0 W/5829862-5829862 FN1221-S Single Base Substitution C-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3956-S.SNP.4:5830592 chr04:005830592 0 W/5830592-5830592 FN3956-S SNP T -> C AC=2;AN=168;BQB=0.90296;DP=3094;DP4=1673,1314,19,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.85474e-15;MQSB=0.918766;RPB=0.960603;SGB=93.0718;VDB=0.320698;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.4:5830880 chr04:005830880 0 W/5830880-5830880 FN4078-S SNP G -> A AC=2;AN=182;BQB=0.992558;DP=2909;DP4=918,1677,15,22;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=7.00094e-19;MQSB=0.00226382;RPB=0.362022;SGB=-4.62771;VDB=0.728286;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V395|448|LOC_Os04g10730|protein_coding|CODING|LOC_Os04g10730.1|2|1) FN2550-S.SNP.4:5837191 chr04:005837191 0 W/5837191-5837191 FN2550-S SNP T -> C AC=1;AN=198;BQB=0.048098;DP=4073;DP4=2065,1757,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.83016e-06;MQSB=0.994126;RPB=0.64925;SGB=-15.6211;VDB=0.830975;EFF=INTRON(MODIFIER||||884|LOC_Os04g10740|protein_coding|CODING|LOC_Os04g10740.1|3|1) FN4069-S.SNP.4:5843932 chr04:005843932 0 W/5843932-5843932 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.980117;DP=2396;DP4=864,1459,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.67189e-12;MQSB=0.880825;RPB=0.999389;SGB=93.7308;VDB=0.674933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.4:5846098 chr04:005846098 0 W/5846098-5846098 FN1497-S Single Base Substitution T-C INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3731-S.SNP.4:5846156 chr04:005846156 0 W/5846156-5846156 FN3731-S SNP A -> C AC=2;AN=190;BQB=0.964652;DP=2798;DP4=1396,1270,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.12737e-11;MQSB=0.985849;RPB=0.684427;SGB=60.9777;VDB=0.692331;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.4:5853086 chr04:005853086 0 W/5853086-5853086 FN2089-S SNP C -> A AC=2;AN=168;BQB=0.044979;DP=3602;DP4=1418,2093,15,48;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.1612e-33;MQSB=0.788553;RPB=0.759451;SGB=196.458;VDB=0.96012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.4:5853983 chr04:005853983 0 W/5853983-5853983 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2403.SNP.4:5865487 chr04:005865487 0 W/5865487-5865487 FN2403 SNP G -> T AC=1;AN=200;BQB=0.898051;DP=4567;DP4=2086,2248,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39288e-12;MQSB=0.95229;RPB=0.0306309;SGB=61.9006;VDB=0.172119;EFF=INTRON(MODIFIER||||508|LOC_Os04g10800|protein_coding|CODING|LOC_Os04g10800.1|1|1) FN2734-S.SNP.4:5873710 chr04:005873710 0 W/5873710-5873710 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.0135829;DP=4554;DP4=2037,2260,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.67282e-05;MQSB=0.873649;RPB=0.936839;SGB=21.6694;VDB=0.481346;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.4:5889372 chr04:005889372 0 W/5889372-5889372 FN708-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN_955-1.SNP.4:5899567 chr04:005899567 0 W/5899567-5899567 FN_955-1 Single Base Substitution A-C HET LOC_Os04g10880 retrotransposon protein, putative, unclassified, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2779-S.SNP.4:5901268 chr04:005901268 0 W/5901268-5901268 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.865183;DP=3685;DP4=1766,1713,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.90652e-14;MQSB=0.864933;RPB=0.997565;SGB=17.325;VDB=0.524634;EFF=INTRON(MODIFIER||||495|LOC_Os04g10880|protein_coding|CODING|LOC_Os04g10880.1|3|1) FN2302.SNP.4:5903368 chr04:005903368 0 W/5903368-5903368 FN2302 SNP C -> T AC=1;AN=192;BQB=0.971224;DP=5011;DP4=2387,2296,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.16236e-16;MQSB=0.761113;RPB=0.80794;SGB=-78.8574;VDB=0.945971;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.4:5903848 chr04:005903848 0 W/5903848-5903848 FN_788-1-1 Single Base Substitution A-T Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2362.SNP.4:5910002 chr04:005910002 0 W/5910002-5910002 FN2362 SNP A -> T AC=1;AN=192;BQB=0.14988;DP=6485;DP4=3153,2909,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0639938;MQB=0.0911255;MQSB=5.90875e-16;RPB=0.256537;SGB=-54.4513;VDB=0.255647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.4:5910891 chr04:005910891 0 W/5910891-5910891 FN2317 SNP T -> C AC=1;AN=192;BQB=0.858474;DP=5083;DP4=2258,2398,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.41448e-13;MQSB=0.37303;RPB=0.538908;SGB=19.8696;VDB=0.210386;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.4:5911433 chr04:005911433 0 W/5911433-5911433 FN2210-S SNP A -> G AC=1;AN=190;BQB=0.405792;DP=4839;DP4=2382,2151,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0963e-07;MQSB=0.930417;RPB=0.268315;SGB=18.552;VDB=0.223892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.4:5917251 chr04:005917251 0 W/5917251-5917251 FN1163-S Single Base Substitution A-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN504-S.SNP.4:5918557 chr04:005918557 0 W/5918557-5918557 FN504-S Single Base Substitution G-T INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1634-S.SNP.4:5920782 chr04:005920782 0 W/5920782-5920782 FN1634-S Single Base Substitution G-A INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3829-S.SNP.4:5927419 chr04:005927419 0 W/5927419-5927419 FN3829-S SNP T -> A AC=1;AN=190;BQB=0.864695;DP=2404;DP4=1212,1051,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39893e-08;MQSB=0.991453;RPB=0.850105;SGB=36.1006;VDB=0.413129;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.4:5928583 chr04:005928583 0 W/5928583-5928583 FN-169 Single Base Substitution A-C INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1481-S.SNP.4:5930085 chr04:005930085 0 W/5930085-5930085 FN1481-S Single Base Substitution C-G INTERGENIC Homo SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3839-S.SNP.4:5931288 chr04:005931288 0 W/5931288-5931288 FN3839-S SNP C -> G AC=1;AN=190;BQB=0.933315;DP=2640;DP4=1311,1252,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.76885e-08;MQSB=0.675457;RPB=0.695627;SGB=58.2031;VDB=0.752013;EFF=UTR_3_PRIME(MODIFIER||123||106|LOC_Os04g10940|protein_coding|CODING|LOC_Os04g10940.1|2|1) FN707-S.SNP.4:5933905 chr04:005933905 0 W/5933905-5933905 FN707-S Single Base Substitution T-G INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN-74.SNP.4:5936986 chr04:005936986 0 W/5936986-5936986 FN-74 Single Base Substitution T-C INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN-74.SNP.4:5936987 chr04:005936987 0 W/5936987-5936987 FN-74 Single Base Substitution C-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN4253-S.SNP.4:5938157 chr04:005938157 0 W/5938157-5938157 FN4253-S SNP A -> C AC=1;AN=170;BQB=0.99334;DP=2481;DP4=1229,1195,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39999e-08;MQSB=0.997034;RPB=0.666319;SGB=52.3148;VDB=0.658761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.4:5939594 chr04:005939594 0 W/5939594-5939594 FN1527-S Single Base Substitution G-T INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN444-S.SNP.4:5951805 chr04:005951805 0 W/5951805-5951805 FN444-S Single Base Substitution C-T INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2429.SNP.4:5968996 chr04:005968996 0 W/5968996-5968996 FN2429 SNP T -> C AC=1;AN=200;BQB=0.41465;DP=4868;DP4=2011,2484,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.94101e-08;MQSB=0.939225;RPB=0.936543;SGB=58.8698;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.4:5979877 chr04:005979877 0 W/5979877-5979877 FN961-S Single Base Substitution T-C INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. W247-2-1.SNP.4:5980377 chr04:005980377 0 W/5980377-5980377 W247-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3970-S.SNP.4:5983210 chr04:005983210 0 W/5983210-5983210 FN3970-S SNP A -> G AC=1;AN=168;BQB=0.758036;DP=2818;DP4=1466,1173,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00212917;MQB=0.000655544;MQSB=0.996949;RPB=0.977136;SGB=-16.2342;VDB=0.601875;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.4:5997076 chr04:005997076 0 W/5997076-5997076 FN512-S Single Base Substitution T-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN4078-S.SNP.4:6001900 chr04:006001900 0 W/6001900-6001900 FN4078-S SNP A -> G AC=2;AN=182;BQB=0.984099;DP=2666;DP4=1258,1344,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.44253e-14;MQSB=0.999088;RPB=0.370549;SGB=102.753;VDB=0.460852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.4:6010671 chr04:006010671 0 W/6010671-6010671 FN1099-S Single Base Substitution T-C INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2424.SNP.4:6015837 chr04:006015837 0 W/6015837-6015837 FN2424 SNP C -> T AC=1;AN=200;BQB=0.00518156;DP=4411;DP4=2556,1307,32,25;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0621174;MQB=5.36404e-10;MQSB=9.88322e-26;RPB=0.0140456;SGB=-2145.51;VDB=0.492172;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.4:6017650 chr04:006017650 0 W/6017650-6017650 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.608397;DP=1664;DP4=969,486,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0078125;MQB=0.0247774;MQSB=2.07112e-42;RPB=0.646474;SGB=35.4339;VDB=0.829653;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D308N|333|LOC_Os04g11070|protein_coding|CODING|LOC_Os04g11070.1|1|1) FN2581-S.SNP.4:6018348 chr04:006018348 0 W/6018348-6018348 FN2581-S SNP G -> T AC=1;AN=198;BQB=0.457032;DP=4421;DP4=1984,2182,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0637865;MQB=0.983697;MQSB=6.4379e-15;RPB=0.481422;SGB=72.5245;VDB=0.322596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.4:6021136 chr04:006021136 0 W/6021136-6021136 FN3662-S SNP G -> A AC=2;AN=190;BQB=0.998282;DP=2578;DP4=942,1540,8,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.58338e-11;MQSB=0.956892;RPB=0.160369;SGB=94.6341;VDB=0.0634066;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.4:6024008 chr04:006024008 0 W/6024008-6024008 FN577-S Single Base Substitution G-C INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3517-S.SNP.4:6030433 chr04:006030433 0 W/6030433-6030433 FN3517-S SNP G -> T AC=2;AN=188;BQB=0.9845;DP=3942;DP4=1916,1946,14,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000507357;MQB=6.37335e-13;MQSB=0.932255;RPB=0.987152;SGB=98.9552;VDB=0.625894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A481S|747|LOC_Os04g11080|protein_coding|CODING|LOC_Os04g11080.1|4|1) FN3800-S.SNP.4:6031081 chr04:006031081 0 W/6031081-6031081 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.758798;DP=3706;DP4=1982,1582,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.83274e-14;MQSB=0.999576;RPB=0.791407;SGB=94.6341;VDB=0.106846;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S639|747|LOC_Os04g11080|protein_coding|CODING|LOC_Os04g11080.1|5|1) FN1272-S.SNP.4:6034714 chr04:006034714 0 W/6034714-6034714 FN1272-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g11090 retrotransposon protein, putative, unclassified, expressed SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2358.SNP.4:6036263 chr04:006036263 0 W/6036263-6036263 FN2358 SNP C -> T AC=1;AN=192;BQB=0.307072;DP=4631;DP4=2076,2289,4,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00280717;MQB=5.69417e-07;MQSB=0.930678;RPB=0.229495;SGB=-15.333;VDB=0.119974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A453T|1291|LOC_Os04g11090|protein_coding|CODING|LOC_Os04g11090.1|3|1) FN3955-S.SNP.4:6037365 chr04:006037365 0 W/6037365-6037365 FN3955-S SNP A -> G AC=2;AN=168;BQB=0.982696;DP=3209;DP4=1456,1582,27,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.79172e-25;MQSB=0.793818;RPB=0.279891;SGB=57.1309;VDB=0.548955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y318H|1291|LOC_Os04g11090|protein_coding|CODING|LOC_Os04g11090.1|2|1) FN1368-S.SNP.4:6039273 chr04:006039273 0 W/6039273-6039273 FN1368-S Single Base Substitution A-G INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2263-S.SNP.4:6040885 chr04:006040885 0 W/6040885-6040885 FN2263-S SNP C -> A AC=2;AN=190;BQB=0.37771;DP=5065;DP4=2605,2013,26,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.30694e-26;MQSB=0.722397;RPB=0.946572;SGB=58.4968;VDB=0.170014;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.4:6061168 chr04:006061168 0 W/6061168-6061168 FN4101-S SNP T -> C AC=2;AN=182;BQB=0.990405;DP=2908;DP4=1262,1475,8,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.8249e-13;MQSB=0.986561;RPB=0.870472;SGB=84.7797;VDB=0.356559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.4:6061762 chr04:006061762 0 W/6061762-6061762 FN2563-S SNP G -> T AC=2;AN=198;BQB=0.875482;DP=3091;DP4=2025,900,10,4;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=0.0127056;MQSB=0;RPB=0.999079;SGB=58.7391;VDB=0.276349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.4:6062367 chr04:006062367 0 W/6062367-6062367 FN2184-S SNP T -> C AC=1;AN=190;BQB=0.709614;DP=5045;DP4=2459,2184,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.08746e-08;MQSB=0.976566;RPB=0.582274;SGB=64.5316;VDB=0.587319;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S34P|422|LOC_Os04g11150|protein_coding|CODING|LOC_Os04g11150.1|2|1) FN2541-S.SNP.4:6062680 chr04:006062680 0 W/6062680-6062680 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.991945;DP=4386;DP4=2083,2055,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.34905e-08;MQSB=0.00182977;RPB=0.819551;SGB=76.1002;VDB=0.95353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S138L|422|LOC_Os04g11150|protein_coding|CODING|LOC_Os04g11150.1|2|1) FN242-S.SNP.4:6067787 chr04:006067787 0 W/6067787-6067787 FN242-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g11160 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2299.SNP.4:6071200 chr04:006071200 0 W/6071200-6071200 FN2299 SNP C -> A AC=1;AN=192;BQB=0.115939;DP=5319;DP4=2672,2194,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.41927e-10;MQSB=0.0487806;RPB=0.742633;SGB=13.6122;VDB=0.569859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.4:6073709 chr04:006073709 0 W/6073709-6073709 FN3537-S SNP T -> C AC=2;AN=188;BQB=0.903983;DP=3900;DP4=1636,2009,17,21;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.015641;MQB=0.00137272;MQSB=0.000213783;RPB=0.547136;SGB=124.567;VDB=0.15886;EFF=SPLICE_SITE_REGION(LOW||||878|LOC_Os04g11170|protein_coding|CODING|LOC_Os04g11170.1|2|1),INTRON(MODIFIER||||878|LOC_Os04g11170|protein_coding|CODING|LOC_Os04g11170.1|2|1) FN3445-S.SNP.4:6076727 chr04:006076727 0 W/6076727-6076727 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.999676;DP=3534;DP4=1883,1546,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00282965;MQB=2.24698e-06;MQSB=1.41081e-05;RPB=0.985411;SGB=46.3132;VDB=0.615791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1819D|1836|LOC_Os04g11180|protein_coding|CODING|LOC_Os04g11180.1|5|1) FN2110-S.SNP.4:6079375 chr04:006079375 0 W/6079375-6079375 FN2110-S SNP G -> A AC=2;AN=168;BQB=0.468448;DP=1730;DP4=1040,647,20,10;HOB=0.0235261;ICB=0.494119;MQ=27;MQ0F=0.0849711;MQB=0.604903;MQSB=0.0015229;RPB=0.113225;SGB=46.6062;VDB=0.509126;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G977|1836|LOC_Os04g11180|protein_coding|CODING|LOC_Os04g11180.1|4|1) FN2779-S.SNP.4:6084861 chr04:006084861 0 W/6084861-6084861 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.865438;DP=4040;DP4=1902,1903,6,17;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.196782;MQB=0.646629;MQSB=1.00216e-12;RPB=0.870464;SGB=72.5051;VDB=0.759096;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.4:6092067 chr04:006092067 0 W/6092067-6092067 FN1916 Single Base Substitution C-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN-144.SNP.4:6097393 chr04:006097393 0 W/6097393-6097393 FN-144 Single Base Substitution C-T INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN511-S.SNP.4:6097444 chr04:006097444 0 W/6097444-6097444 FN511-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3913-S.SNP.4:6102002 chr04:006102002 0 W/6102002-6102002 FN3913-S SNP C -> A AC=1;AN=158;BQB=0.932805;DP=2550;DP4=1304,1140,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.46528e-07;MQSB=0.992993;RPB=0.794205;SGB=30.704;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.4:6104522 chr04:006104522 0 W/6104522-6104522 FN1368-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1407-S.SNP.4:6106173 chr04:006106173 0 W/6106173-6106173 FN1407-S Single Base Substitution T-C INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN4188-S.SNP.4:6106199 chr04:006106199 0 W/6106199-6106199 FN4188-S SNP G -> C AC=1;AN=170;BQB=0.973619;DP=2714;DP4=1338,1309,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.4271e-11;MQSB=0.998323;RPB=0.585962;SGB=70.0854;VDB=0.0730311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.4:6110329 chr04:006110329 0 W/6110329-6110329 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.824728;DP=4440;DP4=2177,2058,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00135135;MQB=1.28128e-06;MQSB=0.818933;RPB=0.478802;SGB=36.6644;VDB=0.382138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.4:6110493 chr04:006110493 0 W/6110493-6110493 FN3941-S SNP G -> T AC=2;AN=168;BQB=0.202226;DP=1920;DP4=805,1009,9,9;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.159896;MQB=0.0644691;MQSB=1.5548e-08;RPB=0.358587;SGB=-15.3725;VDB=0.0462635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.4:6114315 chr04:006114315 0 W/6114315-6114315 FN3426-S SNP T -> C AC=2;AN=184;BQB=0.954627;DP=3680;DP4=1396,2156,8,26;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.0144022;MQB=0.178416;MQSB=2.09671e-05;RPB=0.394842;SGB=71.1891;VDB=0.922341;EFF=INTRON(MODIFIER||||690|LOC_Os04g11210|protein_coding|CODING|LOC_Os04g11210.1|1|1) FN3990-S.SNP.4:6115937 chr04:006115937 0 W/6115937-6115937 FN3990-S SNP C -> T AC=1;AN=168;BQB=0.7517;DP=2772;DP4=1442,1210,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.31974e-07;MQSB=5.44949e-11;RPB=0.936311;SGB=41.6313;VDB=0.547065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.4:6122695 chr04:006122695 0 W/6122695-6122695 FN1631-S Single Base Substitution G-A INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN424-S.SNP.4:6125376 chr04:006125376 0 W/6125376-6125376 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3474-S.SNP.4:6125961 chr04:006125961 0 W/6125961-6125961 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.869785;DP=3319;DP4=1320,1901,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.341368;MQB=0.985501;MQSB=0;RPB=0.953088;SGB=57.786;VDB=0.982198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.4:6128810 chr04:006128810 0 W/6128810-6128810 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2451.SNP.4:6129991 chr04:006129991 0 W/6129991-6129991 FN2451 SNP G -> A AC=1;AN=200;BQB=0.740918;DP=4977;DP4=2410,2293,23,15;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.431585;MQB=0.270212;MQSB=0;RPB=0.978186;SGB=126.794;VDB=0.699169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.4:6133809 chr04:006133809 0 W/6133809-6133809 FN1082-S Single Base Substitution T-C INTERGENIC HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN889-S.SNP.4:6136966 chr04:006136966 0 W/6136966-6136966 FN889-S Single Base Substitution T-G INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN-353.SNP.4:6139727 chr04:006139727 0 W/6139727-6139727 FN-353 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g11230 retrotransposon protein, putative, unclassified, expressed SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3779-S.SNP.4:6144305 chr04:006144305 0 W/6144305-6144305 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.914088;DP=2577;DP4=1301,1182,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.49666e-08;MQSB=0.927245;RPB=0.993866;SGB=53.6492;VDB=0.626643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G725E|1557|LOC_Os04g11240|protein_coding|CODING|LOC_Os04g11240.1|4|1) FN1670-S.SNP.4:6147210 chr04:006147210 0 W/6147210-6147210 FN1670-S SNP A -> T AC=2;AN=188;BQB=0.087537;DP=3414;DP4=1801,1567,19,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.40357e-14;MQSB=0.999989;RPB=0.952833;SGB=61.6823;VDB=0.924797;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S1372|1557|LOC_Os04g11240|protein_coding|CODING|LOC_Os04g11240.1|6|1) FN2639-S.SNP.4:6147481 chr04:006147481 0 W/6147481-6147481 FN2639-S SNP A -> G AC=1;AN=200;BQB=0.892402;DP=4946;DP4=2537,2177,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000404367;MQB=8.21796e-13;MQSB=0.999991;RPB=0.846072;SGB=91.1059;VDB=0.835577;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S1463G|1557|LOC_Os04g11240|protein_coding|CODING|LOC_Os04g11240.1|6|1) FN-54.SNP.4:6148617 chr04:006148617 0 W/6148617-6148617 FN-54 Single Base Substitution C-T INTERGENIC HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2198-S.SNP.4:6148617 chr04:006148617 0 W/6148617-6148617 FN2198-S SNP C -> T AC=1;AN=190;BQB=0.543872;DP=3157;DP4=1563,1400,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000926903;MQSB=1.78103e-07;RPB=0.616589;SGB=26.3271;VDB=0.932169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.4:6148617 chr04:006148617 0 W/6148617-6148617 FN2305 SNP C -> T AC=2;AN=192;BQB=0.556508;DP=4304;DP4=2203,1849,20,16;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.89607e-18;MQSB=0.00917628;RPB=0.818434;SGB=77.6365;VDB=0.163436;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.4:6148617 chr04:006148617 0 W/6148617-6148617 FN931-S Single Base Substitution C-T INTERGENIC HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3494-S.SNP.4:6151608 chr04:006151608 0 W/6151608-6151608 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.931938;DP=3557;DP4=1610,1666,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.732e-07;MQSB=0.000349098;RPB=0.852986;SGB=53.2642;VDB=0.985479;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.4:6153902 chr04:006153902 0 W/6153902-6153902 FN829-S Single Base Substitution G-C INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1001-S.SNP.4:6156110 chr04:006156110 0 W/6156110-6156110 FN1001-S Single Base Substitution T-G INTRON HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1374-S.SNP.4:6161381 chr04:006161381 0 W/6161381-6161381 FN1374-S Single Base Substitution C-T INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN470-S.SNP.4:6164944 chr04:006164944 0 W/6164944-6164944 FN470-S Single Base Substitution G-T INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN899-S.SNP.4:6168483 chr04:006168483 0 W/6168483-6168483 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2667-S.SNP.4:6174427 chr04:006174427 0 W/6174427-6174427 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.742344;DP=4092;DP4=2152,1708,10,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.85866e-09;MQSB=0.00467609;RPB=0.977672;SGB=95.7111;VDB=0.643049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.4:6179922 chr04:006179922 0 W/6179922-6179922 FN1720-S SNP T -> G AC=2;AN=188;BQB=0.826835;DP=1829;DP4=668,1119,2,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.000553992;MQSB=0.0777823;RPB=0.560408;SGB=35.9843;VDB=0.149744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K348T|382|LOC_Os04g11320|protein_coding|CODING|LOC_Os04g11320.1|2|1) FN-251.SNP.4:6184623 chr04:006184623 0 W/6184623-6184623 FN-251 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g11330 retrotransposon protein, putative, unclassified, expressed SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN-409.SNP.4:6184693 chr04:006184693 0 W/6184693-6184693 FN-409 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3533-S.SNP.4:6188006 chr04:006188006 0 W/6188006-6188006 FN3533-S SNP T -> C AC=2;AN=188;BQB=0.789866;DP=3010;DP4=1339,1500,9,13;HOB=0.0210502;ICB=0.494738;MQ=32;MQ0F=0.0893688;MQB=0.864955;MQSB=6.38848e-31;RPB=0.868199;SGB=94.4119;VDB=0.828249;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.4:6189206 chr04:006189206 0 W/6189206-6189206 FN922-S Single Base Substitution G-A INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2335.SNP.4:6192781 chr04:006192781 0 W/6192781-6192781 FN2335 SNP A -> C AC=2;AN=192;BQB=0.494157;DP=5225;DP4=2152,2402,40,44;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000191388;MQB=1.4013e-45;MQSB=0.950941;RPB=0.997488;SGB=231.932;VDB=0.2965;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.4:6193260 chr04:006193260 0 W/6193260-6193260 FN630-S Single Base Substitution G-T INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN630-S.SNP.4:6193261 chr04:006193261 0 W/6193261-6193261 FN630-S Single Base Substitution A-T INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN629-S.SNP.4:6194850 chr04:006194850 0 W/6194850-6194850 FN629-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g11350 retrotransposon protein, putative, unclassified, expressed SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-243.SNP.4:6196847 chr04:006196847 0 W/6196847-6196847 FN-243 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g11350 retrotransposon protein, putative, unclassified, expressed SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN2653-S.SNP.4:6202862 chr04:006202862 0 W/6202862-6202862 FN2653-S SNP T -> C AC=1;AN=200;BQB=0.629867;DP=4513;DP4=2349,1990,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87636e-07;MQSB=0.853915;RPB=0.938611;SGB=24.2746;VDB=0.601778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.4:6208089 chr04:006208089 0 W/6208089-6208089 FN2485 SNP G -> T AC=1;AN=200;BQB=0.927691;DP=4193;DP4=1994,1982,10,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00119246;MQB=2.74297e-07;MQSB=0.11011;RPB=0.447553;SGB=61.9006;VDB=0.0528463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.4:6211518 chr04:006211518 0 W/6211518-6211518 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.994302;DP=4497;DP4=2364,1893,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022237;MQB=3.8401e-13;MQSB=0.190584;RPB=0.999662;SGB=75.1932;VDB=0.0239636;EFF=INTRON(MODIFIER||||634|LOC_Os04g11370|protein_coding|CODING|LOC_Os04g11370.1|1|1) FN-306.SNP.4:6213813 chr04:006213813 0 W/6213813-6213813 FN-306 Single Base Substitution A-G INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN4088-S.SNP.4:6213866 chr04:006213866 0 W/6213866-6213866 FN4088-S SNP C -> T AC=1;AN=182;BQB=0.958213;DP=2995;DP4=1474,1459,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.2242e-08;MQSB=0.97898;RPB=0.606644;SGB=39.1386;VDB=0.741722;EFF=INTRON(MODIFIER||||634|LOC_Os04g11370|protein_coding|CODING|LOC_Os04g11370.1|6|1) FN3729-S.SNP.4:6218474 chr04:006218474 0 W/6218474-6218474 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.906235;DP=2352;DP4=1266,1005,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00127551;MQB=4.82043e-07;MQSB=0.000417575;RPB=0.267579;SGB=67.3108;VDB=0.271923;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.4:6220426 chr04:006220426 0 W/6220426-6220426 FN4114-S SNP A -> G AC=2;AN=182;BQB=0.988597;DP=3246;DP4=1718,1450,11,11;HOB=0.0217365;ICB=0.494567;MQ=44;MQ0F=0.0234134;MQB=5.51503e-05;MQSB=0.0995979;RPB=0.992994;SGB=93.7308;VDB=0.188231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.4:6229400 chr04:006229400 0 W/6229400-6229400 FN3992-S SNP A -> G AC=1;AN=168;BQB=0.225646;DP=2741;DP4=1403,1252,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.24746e-06;MQSB=0.989422;RPB=0.830802;SGB=17.3231;VDB=0.735684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.4:6230557 chr04:006230557 0 W/6230557-6230557 FN2380 SNP G -> T AC=1;AN=192;BQB=0.969776;DP=5170;DP4=2446,2445,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13104e-09;MQSB=0.893423;RPB=0.758443;SGB=23.7852;VDB=0.559804;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.4:6236810 chr04:006236810 0 W/6236810-6236810 FN4063-S SNP G -> A AC=2;AN=168;BQB=0.943454;DP=2274;DP4=939,1222,5,15;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00175901;MQB=3.20042e-07;MQSB=0.0979792;RPB=0.94939;SGB=83.1885;VDB=0.0483147;EFF=INTERGENIC(MODIFIER||||||||||1) FN-330.SNP.4:6240075 chr04:006240075 0 W/6240075-6240075 FN-330 Single Base Substitution A-C STOP_GAINED HET LOC_Os04g11420 transposon protein, putative, CACTA, En/Spm sub-class SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1136-S.SNP.4:6250132 chr04:006250132 0 W/6250132-6250132 FN1136-S Single Base Substitution A-G INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN2213-S.SNP.4:6258659 chr04:006258659 0 W/6258659-6258659 FN2213-S SNP C -> T AC=2;AN=190;BQB=0.84278;DP=4389;DP4=2218,1798,23,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.47454e-23;MQSB=0.900284;RPB=0.538372;SGB=217.589;VDB=0.018504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.4:6266668 chr04:006266668 0 W/6266668-6266668 FN3639-S SNP G -> A AC=1;AN=190;BQB=0.994967;DP=3227;DP4=1902,1209,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.61221e-06;MQSB=0.25375;RPB=0.615465;SGB=53.6492;VDB=0.837936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.4:6269660 chr04:006269660 0 W/6269660-6269660 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.949142;DP=4320;DP4=2031,2114,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.24472e-09;MQSB=0.958834;RPB=0.905156;SGB=77.1196;VDB=0.825352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.4:6273210 chr04:006273210 0 W/6273210-6273210 FN-108 Single Base Substitution C-A INTERGENIC HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3784-S.SNP.4:6273600 chr04:006273600 0 W/6273600-6273600 FN3784-S SNP A -> G AC=1;AN=190;BQB=0.911702;DP=1640;DP4=770,796,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8928e-05;MQSB=0.00253297;RPB=0.807377;SGB=35.4339;VDB=0.422292;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.4:6276194 chr04:006276194 0 W/6276194-6276194 FN2470 SNP C -> T AC=2;AN=200;BQB=0.165794;DP=4114;DP4=1974,1876,17,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.08623e-18;MQSB=0.729267;RPB=0.853572;SGB=-4.03268;VDB=0.593854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.4:6276224 chr04:006276224 0 W/6276224-6276224 FN3594-S SNP C -> A AC=1;AN=188;BQB=0.550818;DP=2979;DP4=1555,1349,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.91344e-10;MQSB=0.987236;RPB=0.612067;SGB=71.6954;VDB=0.967027;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.4:6282150 chr04:006282150 0 W/6282150-6282150 FN937-S Single Base Substitution G-C INTRON HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2331.SNP.4:6282189 chr04:006282189 0 W/6282189-6282189 FN2331 SNP C -> T AC=2;AN=192;BQB=0.850136;DP=4677;DP4=1933,2466,16,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00128287;MQB=4.19376e-22;MQSB=0.841991;RPB=0.979798;SGB=49.5922;VDB=0.0761685;EFF=INTRON(MODIFIER||||581|LOC_Os04g11480|protein_coding|CODING|LOC_Os04g11480.1|1|1) FN2655-S.SNP.4:6282252 chr04:006282252 0 W/6282252-6282252 FN2655-S SNP T -> A AC=1;AN=200;BQB=0.851735;DP=4728;DP4=2278,2191,11,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00148054;MQB=5.19926e-14;MQSB=0.161488;RPB=0.991415;SGB=50.3263;VDB=0.0676295;EFF=INTRON(MODIFIER||||581|LOC_Os04g11480|protein_coding|CODING|LOC_Os04g11480.1|1|1) FN1229-S.SNP.4:6285600 chr04:006285600 0 W/6285600-6285600 FN1229-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2681-S.SNP.4:6286175 chr04:006286175 0 W/6286175-6286175 FN2681-S SNP C -> G AC=2;AN=200;BQB=0.803867;DP=4564;DP4=2113,2185,27,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.00393e-35;MQSB=0.992508;RPB=0.512643;SGB=141.507;VDB=0.72353;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L525|709|LOC_Os04g11500|protein_coding|CODING|LOC_Os04g11500.1|2|1) FN2196-S.SNP.4:6286717 chr04:006286717 0 W/6286717-6286717 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.81072;DP=4987;DP4=2341,2171,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200521;MQB=2.5769e-14;MQSB=0.955594;RPB=0.992429;SGB=85.8548;VDB=0.664492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A345T|709|LOC_Os04g11500|protein_coding|CODING|LOC_Os04g11500.1|2|1) FN406-S.SNP.4:6287019 chr04:006287019 0 W/6287019-6287019 FN406-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g11500 retrotransposon protein, putative, unclassified, expressed SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN4109-S.SNP.4:6287229 chr04:006287229 0 W/6287229-6287229 FN4109-S SNP C -> A AC=1;AN=182;BQB=0.502698;DP=3176;DP4=1449,1669,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000107259;MQSB=0.921451;RPB=0.395198;SGB=32.1169;VDB=0.134895;EFF=INTRON(MODIFIER||||709|LOC_Os04g11500|protein_coding|CODING|LOC_Os04g11500.1|1|1) FN2160-S.SNP.4:6290899 chr04:006290899 0 W/6290899-6290899 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.072122;DP=3152;DP4=1898,1224,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.76847e-07;MQSB=0.999306;RPB=0.989105;SGB=-119.349;VDB=0.954275;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.4:6296224 chr04:006296224 0 W/6296224-6296224 FN813-S Single Base Substitution C-G INTRON HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN_N1-202-3.SNP.4:6297102 chr04:006297102 0 W/6297102-6297102 FN_N1-202-3 Single Base Substitution A-T Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN_N1-202-3.SNP.4:6297103 chr04:006297103 0 W/6297103-6297103 FN_N1-202-3 Single Base Substitution C-T Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN3803-S.SNP.4:6313477 chr04:006313477 0 W/6313477-6313477 FN3803-S SNP T -> A AC=2;AN=190;BQB=0.990783;DP=2742;DP4=1329,1323,17,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47562e-21;MQSB=0.96604;RPB=0.747308;SGB=128.501;VDB=0.805045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.4:6321603 chr04:006321603 0 W/6321603-6321603 FN2386 SNP G -> T AC=1;AN=192;BQB=0.388215;DP=4659;DP4=2133,2217,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.039e-11;MQSB=0.875084;RPB=0.856417;SGB=18.3052;VDB=0.955997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.4:6322843 chr04:006322843 0 W/6322843-6322843 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.173229;DP=3866;DP4=1939,1879,16,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.0484e-17;MQSB=0.98998;RPB=0.999557;SGB=-9.34108;VDB=0.198641;EFF=INTRON(MODIFIER||||368|LOC_Os04g11540|protein_coding|CODING|LOC_Os04g11540.1|1|1) FN2080-S.SNP.4:6322844 chr04:006322844 0 W/6322844-6322844 FN2080-S SNP T -> A AC=1;AN=168;BQB=0.35672;DP=3861;DP4=1935,1880,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.62165e-15;MQSB=0.989977;RPB=0.990989;SGB=-9.7719;VDB=0.336116;EFF=INTRON(MODIFIER||||368|LOC_Os04g11540|protein_coding|CODING|LOC_Os04g11540.1|1|1) FN2597-S.SNP.4:6328802 chr04:006328802 0 W/6328802-6328802 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.96109;DP=4408;DP4=2323,1849,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70892e-07;MQSB=0.182758;RPB=0.768104;SGB=6.15916;VDB=0.873176;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.4:6330044 chr04:006330044 0 W/6330044-6330044 FN1027-S Single Base Substitution G-A INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1399-S.SNP.4:6334994 chr04:006334994 0 W/6334994-6334994 FN1399-S Single Base Substitution C-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2324.SNP.4:6334994 chr04:006334994 0 W/6334994-6334994 FN2324 SNP C -> A AC=1;AN=192;BQB=0.468402;DP=5056;DP4=2684,1945,24,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000593354;MQB=2.13629e-16;MQSB=0.980398;RPB=0.737801;SGB=-165.718;VDB=0.244169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.4:6334994 chr04:006334994 0 W/6334994-6334994 FN2682-S SNP C -> A AC=2;AN=200;BQB=0.7141;DP=5005;DP4=2615,2088,16,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.39448e-17;MQSB=0.846811;RPB=0.93122;SGB=28.752;VDB=0.819515;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.4:6334994 chr04:006334994 0 W/6334994-6334994 W674-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2541-S.SNP.4:6339672 chr04:006339672 0 W/6339672-6339672 FN2541-S SNP G -> C AC=1;AN=198;BQB=0.645759;DP=3984;DP4=2088,1658,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.1323e-09;MQSB=0.692261;RPB=0.938147;SGB=-12.0504;VDB=0.973134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.4:6345537 chr04:006345537 0 W/6345537-6345537 FN1634-S Single Base Substitution G-A INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3425-S.SNP.4:6347005 chr04:006347005 0 W/6347005-6347005 FN3425-S SNP G -> T AC=1;AN=184;BQB=0.824761;DP=2982;DP4=1486,1429,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=8.0828e-08;MQSB=0.000103251;RPB=0.852745;SGB=48.7425;VDB=0.0869849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H81Q|230|LOC_Os04g11590|protein_coding|CODING|LOC_Os04g11590.1|2|1) FN2577-S.SNP.4:6349439 chr04:006349439 0 W/6349439-6349439 FN2577-S SNP T -> C AC=1;AN=198;BQB=0.546875;DP=4164;DP4=1914,1992,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31948e-05;MQSB=0.310018;RPB=0.683587;SGB=40.3588;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.4:6350233 chr04:006350233 0 W/6350233-6350233 FN786-S Single Base Substitution T-C INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN1175-S.SNP.4:6355387 chr04:006355387 0 W/6355387-6355387 FN1175-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g11610 retrotransposon protein, putative, unclassified, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4009-S.SNP.4:6356742 chr04:006356742 0 W/6356742-6356742 FN4009-S SNP A -> C AC=1;AN=168;BQB=0.947222;DP=2797;DP4=1159,1443,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.05758e-06;MQSB=0.796969;RPB=0.639514;SGB=-1.53256;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.4:6356967 chr04:006356967 0 W/6356967-6356967 FN-164 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g11620 retrotransposon protein, putative, unclassified, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN4187-S.SNP.4:6359119 chr04:006359119 0 W/6359119-6359119 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.365385;DP=2511;DP4=1214,1252,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00159299;MQB=0.000341582;MQSB=0.212212;RPB=0.880657;SGB=61.2001;VDB=0.803081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T1205I|1847|LOC_Os04g11620|protein_coding|CODING|LOC_Os04g11620.1|6|1) FN1423-S.SNP.4:6361591 chr04:006361591 0 W/6361591-6361591 FN1423-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2380.SNP.4:6362296 chr04:006362296 0 W/6362296-6362296 FN2380 SNP C -> G AC=2;AN=192;BQB=0.500901;DP=4401;DP4=1899,2119,19,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000454442;MQB=1.66488e-13;MQSB=0.995325;RPB=0.990108;SGB=67.3792;VDB=0.209181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G272R|1847|LOC_Os04g11620|protein_coding|CODING|LOC_Os04g11620.1|3|1) FN4130-S.SNP.4:6365774 chr04:006365774 0 W/6365774-6365774 FN4130-S SNP G -> C AC=1;AN=182;BQB=0.98397;DP=2990;DP4=1429,1482,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.26265e-08;MQSB=0.978431;RPB=0.672097;SGB=35.6277;VDB=0.325636;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.4:6369580 chr04:006369580 0 W/6369580-6369580 FN850-S Single Base Substitution G-A INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. W472-5-1.SNP.4:6375813 chr04:006375813 0 W/6375813-6375813 W472-5-1 Single Base Substitution T-G INTRON HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1351-S.SNP.4:6395329 chr04:006395329 0 W/6395329-6395329 FN1351-S Single Base Substitution C-A INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN405-S.SNP.4:6411953 chr04:006411953 0 W/6411953-6411953 FN405-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g11680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1482-S.SNP.4:6413994 chr04:006413994 0 W/6413994-6413994 FN1482-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g11690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN3938-S.SNP.4:6418521 chr04:006418521 0 W/6418521-6418521 FN3938-S SNP A -> G AC=2;AN=158;BQB=0.983705;DP=2613;DP4=1259,1163,17,22;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=3.45079e-16;MQSB=0.573991;RPB=0.113075;SGB=78.316;VDB=0.634691;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q35|269|LOC_Os04g11710|protein_coding|CODING|LOC_Os04g11710.1|1|1) FN3435-S.SNP.4:6421279 chr04:006421279 0 W/6421279-6421279 FN3435-S SNP C -> A AC=1;AN=184;BQB=0.970158;DP=3587;DP4=1670,1808,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.81087e-06;MQSB=0.985334;RPB=0.430812;SGB=35.1773;VDB=0.534866;EFF=INTRON(MODIFIER||||469|LOC_Os04g11720|protein_coding|CODING|LOC_Os04g11720.1|5|1) FN630-S.SNP.4:6422739 chr04:006422739 0 W/6422739-6422739 FN630-S Single Base Substitution A-G INTRON HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1525-S.SNP.4:6427384 chr04:006427384 0 W/6427384-6427384 FN1525-S Single Base Substitution G-A INTRON HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2721-S.SNP.4:6430175 chr04:006430175 0 W/6430175-6430175 FN2721-S SNP G -> T AC=1;AN=200;BQB=0.157366;DP=4934;DP4=2349,2351,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33943e-15;MQSB=0.777133;RPB=0.897588;SGB=19.1209;VDB=0.0900516;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.4:6432062 chr04:006432062 0 W/6432062-6432062 FN-207 Single Base Substitution C-T INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-207.SNP.4:6432063 chr04:006432063 0 W/6432063-6432063 FN-207 Single Base Substitution T-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1060-S.SNP.4:6435231 chr04:006435231 0 W/6435231-6435231 FN1060-S Single Base Substitution C-A INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3826-S.SNP.4:6441623 chr04:006441623 0 W/6441623-6441623 FN3826-S SNP C -> A AC=1;AN=190;BQB=0.565089;DP=2517;DP4=1273,1053,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89672e-06;MQSB=0.947195;RPB=0.826579;SGB=-2.10437;VDB=0.741616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.4:6442976 chr04:006442976 0 W/6442976-6442976 FN3371-S SNP C -> T AC=1;AN=184;BQB=0.711118;DP=4489;DP4=2185,2171,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.302963;MQB=0.94084;MQSB=4.27762e-33;RPB=0.98332;SGB=44.2207;VDB=0.026842;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.4:6452031 chr04:006452031 0 W/6452031-6452031 FN1760-S SNP T -> C AC=2;AN=188;BQB=0.829841;DP=4037;DP4=1887,2103,20,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07246e-16;MQSB=0.999938;RPB=0.997056;SGB=110.393;VDB=0.997861;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L580P|665|LOC_Os04g11780|protein_coding|CODING|LOC_Os04g11780.1|6|1) FN358-S.SNP.4:6453995 chr04:006453995 0 W/6453995-6453995 FN358-S Single Base Substitution T-A INTERGENIC HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3807-S.SNP.4:6465988 chr04:006465988 0 W/6465988-6465988 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.99033;DP=3053;DP4=1482,1471,13,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37561e-08;MQSB=0.94852;RPB=0.0498978;SGB=43.2083;VDB=0.111591;EFF=INTRON(MODIFIER||||181|LOC_Os04g11800|protein_coding|CODING|LOC_Os04g11800.1|1|1) FN2706-S.SNP.4:6466499 chr04:006466499 0 W/6466499-6466499 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.21279;DP=3924;DP4=1919,1815,12,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.56158e-07;MQSB=0.0269695;RPB=0.61879;SGB=91.1059;VDB=0.432984;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T155|181|LOC_Os04g11800|protein_coding|CODING|LOC_Os04g11800.1|2|1) W278-3-1.SNP.4:6473396 chr04:006473396 0 W/6473396-6473396 W278-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN543-S.SNP.4:6478341 chr04:006478341 0 W/6478341-6478341 FN543-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g11820 white-brown complex homolog protein, putative, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1716-S.SNP.4:6481301 chr04:006481301 0 W/6481301-6481301 FN1716-S SNP G -> A AC=2;AN=188;BQB=0.187812;DP=3245;DP4=1269,1917,15,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.89685e-14;MQSB=0.751125;RPB=0.310176;SGB=76.9421;VDB=0.0533059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T73I|1065|LOC_Os04g11820|protein_coding|CODING|LOC_Os04g11820.1|2|1) FN2628-S.SNP.4:6485519 chr04:006485519 0 W/6485519-6485519 FN2628-S SNP G -> T AC=1;AN=200;BQB=0.99511;DP=4629;DP4=1622,2406,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74474e-09;MQSB=0.543522;RPB=0.96305;SGB=47.4799;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.4:6489920 chr04:006489920 0 W/6489920-6489920 FN3438-S SNP C -> A AC=1;AN=184;BQB=0.907972;DP=2620;DP4=1067,1462,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0511e-12;MQSB=0.920857;RPB=0.99984;SGB=40.9276;VDB=0.152095;EFF=INTERGENIC(MODIFIER||||||||||1) FN570-S.SNP.4:6494554 chr04:006494554 0 W/6494554-6494554 FN570-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3526-S.SNP.4:6501451 chr04:006501451 0 W/6501451-6501451 FN3526-S SNP A -> C AC=2;AN=188;BQB=0.927308;DP=2848;DP4=1342,1318,15,15;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00351124;MQB=7.52766e-10;MQSB=0.000101057;RPB=0.49046;SGB=-7.39363;VDB=0.336054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.4:6505943 chr04:006505943 0 W/6505943-6505943 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.985152;DP=2870;DP4=1314,1418,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77587e-19;MQSB=0.997535;RPB=0.888608;SGB=107.178;VDB=0.697082;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.4:6513962 chr04:006513962 0 W/6513962-6513962 FN229-S Single Base Substitution C-A INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. W7-1-1.SNP.4:6515597 chr04:006515597 0 W/6515597-6515597 W7-1-1 Single Base Substitution C-T INTRON HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3628-S.SNP.4:6516460 chr04:006516460 0 W/6516460-6516460 FN3628-S SNP C -> T AC=2;AN=190;BQB=0.306406;DP=3136;DP4=1534,1448,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.20711e-11;MQSB=0.987905;RPB=0.609155;SGB=103.742;VDB=0.337665;EFF=INTRON(MODIFIER||||949|LOC_Os04g11880|protein_coding|CODING|LOC_Os04g11880.1|11|1),INTRON(MODIFIER||||857|LOC_Os04g11880|protein_coding|CODING|LOC_Os04g11880.2|9|1),INTRON(MODIFIER||||867|LOC_Os04g11880|protein_coding|CODING|LOC_Os04g11880.3|9|1) FN1264-S.SNP.4:6527339 chr04:006527339 0 W/6527339-6527339 FN1264-S Single Base Substitution G-A INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3803-S.SNP.4:6527832 chr04:006527832 0 W/6527832-6527832 FN3803-S SNP G -> T AC=2;AN=190;BQB=0.825088;DP=2968;DP4=1569,1190,23,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.79991e-15;MQSB=0.81456;RPB=0.995897;SGB=67.0756;VDB=0.0779184;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.4:6527983 chr04:006527983 0 W/6527983-6527983 FN463-S Single Base Substitution C-T INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. W42-1-3S-1.SNP.4:6542135 chr04:006542135 0 W/6542135-6542135 W42-1-3S-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3669-S.SNP.4:6544936 chr04:006544936 0 W/6544936-6544936 FN3669-S SNP G -> T AC=1;AN=190;BQB=0.976328;DP=2602;DP4=1168,1295,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000222963;MQSB=0.92276;RPB=0.80605;SGB=18.3316;VDB=0.528538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.4:6545209 chr04:006545209 0 W/6545209-6545209 FN2134-S SNP G -> A AC=2;AN=168;BQB=0.993332;DP=2737;DP4=1360,1294,19,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.83985e-21;MQSB=0.968247;RPB=0.951936;SGB=87.8168;VDB=0.243749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.4:6545209 chr04:006545209 0 W/6545209-6545209 FN2385 SNP G -> A AC=2;AN=192;BQB=0.187791;DP=4383;DP4=2061,2001,20,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.91914e-13;MQSB=0.867076;RPB=0.742346;SGB=107.503;VDB=0.972677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.4:6545209 chr04:006545209 0 W/6545209-6545209 FN3356-S SNP G -> A AC=2;AN=184;BQB=0.98438;DP=2846;DP4=1437,1313,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.36506e-12;MQSB=0.999552;RPB=0.19872;SGB=98.4821;VDB=0.129983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.4:6545209 chr04:006545209 0 W/6545209-6545209 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.603151;DP=2897;DP4=1507,1330,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00214742;MQSB=0.99043;RPB=0.678353;SGB=30.8063;VDB=0.768478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.4:6545209 chr04:006545209 0 W/6545209-6545209 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.85485;DP=2484;DP4=1301,1103,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36615e-05;MQSB=0.99915;RPB=0.930269;SGB=49.0954;VDB=0.787081;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.4:6546033 chr04:006546033 0 W/6546033-6546033 FN2223-S SNP G -> A AC=2;AN=190;BQB=0.855536;DP=5172;DP4=2690,2124,33,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.73147e-35;MQSB=0.947043;RPB=0.896431;SGB=290.451;VDB=0.87879;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.4:6557547 chr04:006557547 0 W/6557547-6557547 FN-399 Single Base Substitution G-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.4:6557547 chr04:006557547 0 W/6557547-6557547 FN399-S Single Base Substitution G-A INTERGENIC HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3439-S.SNP.4:6558420 chr04:006558420 0 W/6558420-6558420 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.832524;DP=3315;DP4=1719,1504,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.97926e-07;MQSB=0.74553;RPB=0.772008;SGB=53.2642;VDB=0.412011;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A128|215|LOC_Os04g11956|protein_coding|CODING|LOC_Os04g11956.1|2|1) FN2618-S.SNP.4:6560999 chr04:006560999 0 W/6560999-6560999 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.302238;DP=4137;DP4=2288,1586,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.18487e-14;MQSB=0.889614;RPB=0.771816;SGB=42.3199;VDB=0.387073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:6561001 chr04:006561001 0 W/6561001-6561001 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.998141;DP=4145;DP4=2311,1600,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20778e-14;MQSB=0.983932;RPB=0.889476;SGB=68.91;VDB=0.141462;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:6561003 chr04:006561003 0 W/6561003-6561003 FN2618-S SNP C -> A AC=1;AN=198;BQB=0.288359;DP=4149;DP4=2305,1586,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.05956e-15;MQSB=0.994989;RPB=0.999898;SGB=44.9151;VDB=0.435347;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.4:6569160 chr04:006569160 0 W/6569160-6569160 FN1585-S Single Base Substitution A-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN971-S.SNP.4:6569280 chr04:006569280 0 W/6569280-6569280 FN971-S Single Base Substitution A-T INTERGENIC HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN480-S.SNP.4:6569790 chr04:006569790 0 W/6569790-6569790 FN480-S Single Base Substitution G-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3848-S.SNP.4:6572293 chr04:006572293 0 W/6572293-6572293 FN3848-S SNP G -> T AC=1;AN=158;BQB=0.798037;DP=2342;DP4=1075,1165,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.49158e-05;MQSB=0.627976;RPB=0.708502;SGB=30.704;VDB=0.953414;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.4:6584929 chr04:006584929 0 W/6584929-6584929 FN4137-S SNP G -> C AC=1;AN=170;BQB=0.976051;DP=2982;DP4=1846,1054,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.41825e-05;MQSB=0.853072;RPB=0.999606;SGB=38.987;VDB=0.00333045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.4:6586004 chr04:006586004 0 W/6586004-6586004 FN2320 SNP G -> A AC=2;AN=192;BQB=0.0598867;DP=4357;DP4=2064,1901,12,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.10247e-10;MQSB=0.039116;RPB=0.770904;SGB=54.5574;VDB=0.128197;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.4:6586365 chr04:006586365 0 W/6586365-6586365 FN3282-S SNP C -> T AC=1;AN=184;BQB=0.977614;DP=2906;DP4=1895,877,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000344116;MQB=4.93826e-05;MQSB=1.10979e-22;RPB=0.961548;SGB=53.2642;VDB=0.0632133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.4:6589242 chr04:006589242 0 W/6589242-6589242 FN-226 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g12000 retrotransposon protein, putative, unclassified, expressed SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-148.SNP.4:6592265 chr04:006592265 0 W/6592265-6592265 FN-148 Single Base Substitution G-A INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2410.SNP.4:6594780 chr04:006594780 0 W/6594780-6594780 FN2410 SNP G -> A AC=1;AN=200;BQB=0.543652;DP=4343;DP4=2191,1873,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.1488e-11;MQSB=0.920054;RPB=0.321761;SGB=-10.0844;VDB=0.582415;EFF=INTRON(MODIFIER||||550|LOC_Os04g12010|protein_coding|CODING|LOC_Os04g12010.1|4|1),INTRON(MODIFIER||||549|LOC_Os04g12010|protein_coding|CODING|LOC_Os04g12010.2|4|1) FN2650-S.SNP.4:6595119 chr04:006595119 0 W/6595119-6595119 FN2650-S SNP A -> G AC=1;AN=200;BQB=0.914574;DP=5067;DP4=2579,2217,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99935e-12;MQSB=0.672328;RPB=0.676224;SGB=72.7161;VDB=0.333246;EFF=INTRON(MODIFIER||||550|LOC_Os04g12010|protein_coding|CODING|LOC_Os04g12010.1|3|1),INTRON(MODIFIER||||549|LOC_Os04g12010|protein_coding|CODING|LOC_Os04g12010.2|3|1) FN3664-S.SNP.4:6601743 chr04:006601743 0 W/6601743-6601743 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.23799;DP=1903;DP4=600,1249,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.117709;MQB=0.689434;MQSB=4.23694e-06;RPB=0.648171;SGB=39.9877;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.4:6603353 chr04:006603353 0 W/6603353-6603353 FN2344 SNP G -> T AC=1;AN=192;BQB=0.549957;DP=4829;DP4=2059,2360,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0894595;MQB=0.173035;MQSB=0.00162605;RPB=0.670896;SGB=90.2896;VDB=0.226902;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R225|1054|LOC_Os04g12030|protein_coding|CODING|LOC_Os04g12030.1|1|1) FN3480-S.SNP.4:6604058 chr04:006604058 0 W/6604058-6604058 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.483789;DP=4274;DP4=2518,1651,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.025737;MQB=0.000548136;MQSB=0.883154;RPB=0.719206;SGB=46.3132;VDB=0.90666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R429C|1054|LOC_Os04g12030|protein_coding|CODING|LOC_Os04g12030.1|2|1) FN621-S.SNP.4:6604567 chr04:006604567 0 W/6604567-6604567 FN621-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN911-S.SNP.4:6606811 chr04:006606811 0 W/6606811-6606811 FN911-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g12040 retrotransposon protein, putative, unclassified, expressed SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN911-S.SNP.4:6606816 chr04:006606816 0 W/6606816-6606816 FN911-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2767-S.SNP.4:6607265 chr04:006607265 0 W/6607265-6607265 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.807149;DP=4227;DP4=1699,2320,5,24;HOB=5.10152e-05;ICB=0.000102546;MQ=10;MQ0F=0.479063;MQB=0.00172379;MQSB=0;RPB=0.676242;SGB=94.0758;VDB=0.589511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1775T|1952|LOC_Os04g12040|protein_coding|CODING|LOC_Os04g12040.1|3|1) FN3581-S.SNP.4:6607265 chr04:006607265 0 W/6607265-6607265 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.874101;DP=2691;DP4=1474,1135,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=13;MQ0F=0.469714;MQB=0.0846019;MQSB=0;RPB=0.969827;SGB=36.1006;VDB=0.737558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1775T|1952|LOC_Os04g12040|protein_coding|CODING|LOC_Os04g12040.1|3|1) FN4147-S.SNP.4:6607265 chr04:006607265 0 W/6607265-6607265 FN4147-S SNP C -> T AC=1;AN=170;BQB=0.991948;DP=2745;DP4=1433,1253,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=13;MQ0F=0.464845;MQB=0.0699829;MQSB=0;RPB=0.703806;SGB=61.2001;VDB=0.845538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1775T|1952|LOC_Os04g12040|protein_coding|CODING|LOC_Os04g12040.1|3|1) FN585-S.SNP.4:6607788 chr04:006607788 0 W/6607788-6607788 FN585-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN998-S.SNP.4:6607879 chr04:006607879 0 W/6607879-6607879 FN998-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g12040 retrotransposon protein, putative, unclassified, expressed SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1344-S.SNP.4:6607918 chr04:006607918 0 W/6607918-6607918 FN1344-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g12040 retrotransposon protein, putative, unclassified, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1112-S.SNP.4:6616093 chr04:006616093 0 W/6616093-6616093 FN1112-S Single Base Substitution A-G INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2673-S.SNP.4:6624937 chr04:006624937 0 W/6624937-6624937 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.570251;DP=4544;DP4=2154,2014,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22319e-08;MQSB=0.985937;RPB=0.940279;SGB=24.2746;VDB=0.525709;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.4:6624973 chr04:006624973 0 W/6624973-6624973 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.0453071;DP=2926;DP4=1496,1221,15,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03036e-07;MQSB=0.687382;RPB=0.14144;SGB=-38.3068;VDB=0.708333;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.4:6628407 chr04:006628407 0 W/6628407-6628407 FN770-S Single Base Substitution G-A INTRON HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2544-S.SNP.4:6633058 chr04:006633058 0 W/6633058-6633058 FN2544-S SNP G -> A AC=2;AN=198;BQB=0.586138;DP=3938;DP4=2107,1608,15,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.89045e-14;MQSB=0.269066;RPB=0.620124;SGB=94.0758;VDB=0.998058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.4:6633283 chr04:006633283 0 W/6633283-6633283 FN3820-S SNP G -> A AC=1;AN=190;BQB=0.929353;DP=2767;DP4=1408,1253,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.72885e-07;MQSB=0.000486135;RPB=0.66465;SGB=53.6492;VDB=0.296245;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.4:6634442 chr04:006634442 0 W/6634442-6634442 FN-74 Single Base Substitution A-T UTR_5_PRIME HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1313-S.SNP.4:6637192 chr04:006637192 0 W/6637192-6637192 FN1313-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g12080 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN_N1-119-1.SNP.4:6648333 chr04:006648333 0 W/6648333-6648333 FN_N1-119-1 Single Base Substitution C-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3469-S.SNP.4:6651728 chr04:006651728 0 W/6651728-6651728 FN3469-S SNP G -> A AC=1;AN=184;BQB=0.666175;DP=3579;DP4=1916,1536,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.5588e-11;MQSB=0.926833;RPB=0.777887;SGB=15.9331;VDB=0.129711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.4:6654166 chr04:006654166 0 W/6654166-6654166 FN1631-S Single Base Substitution A-G INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3422-S.SNP.4:6654564 chr04:006654564 0 W/6654564-6654564 FN3422-S SNP A -> G AC=1;AN=184;BQB=0.336575;DP=2716;DP4=1813,804,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.16376e-05;MQSB=0.985431;RPB=0.992814;SGB=18.2315;VDB=0.625556;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V20|690|LOC_Os04g12090|protein_coding|CODING|LOC_Os04g12090.1|1|1) FN_935-1.SNP.4:6654605 chr04:006654605 0 W/6654605-6654605 FN_935-1 Single Base Substitution G-A HET LOC_Os04g12090 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3420-S.SNP.4:6658420 chr04:006658420 0 W/6658420-6658420 FN3420-S SNP G -> T AC=1;AN=184;BQB=0.995082;DP=4022;DP4=2025,1906,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06401e-06;MQSB=0.594858;RPB=0.667776;SGB=48.7425;VDB=0.217648;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P11H|177|LOC_Os04g12100|protein_coding|CODING|LOC_Os04g12100.1|1|1) FN1757-S.SNP.4:6666260 chr04:006666260 0 W/6666260-6666260 FN1757-S SNP C -> A AC=1;AN=188;BQB=0.0749329;DP=3503;DP4=1786,1678,17,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21386e-12;MQSB=0.98801;RPB=0.414537;SGB=-82.2964;VDB=0.96618;EFF=INTRON(MODIFIER||||325|LOC_Os04g12120|protein_coding|CODING|LOC_Os04g12120.1|1|1) FN1655-S.SNP.4:6667854 chr04:006667854 0 W/6667854-6667854 FN1655-S Single Base Substitution C-G INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN3872-S.SNP.4:6669453 chr04:006669453 0 W/6669453-6669453 FN3872-S SNP T -> A AC=2;AN=158;BQB=0.481214;DP=2089;DP4=804,1171,5,6;HOB=0.024996;ICB=0.493752;MQ=27;MQ0F=0.104356;MQB=0.811739;MQSB=0;RPB=0.901984;SGB=27.3346;VDB=0.531514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.4:6669454 chr04:006669454 0 W/6669454-6669454 FN3872-S SNP T -> A AC=2;AN=158;BQB=0.278479;DP=2089;DP4=817,1180,8,6;HOB=0.024996;ICB=0.493752;MQ=27;MQ0F=0.112015;MQB=0.809039;MQSB=0;RPB=0.399737;SGB=-17.6464;VDB=0.504048;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.4:6677370 chr04:006677370 0 W/6677370-6677370 FN577-S Single Base Substitution T-C INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1129-S.SNP.4:6679019 chr04:006679019 0 W/6679019-6679019 FN1129-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g12130 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN-222.SNP.4:6684702 chr04:006684702 0 W/6684702-6684702 FN-222 Single Base Substitution C-T INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2450.SNP.4:6699927 chr04:006699927 0 W/6699927-6699927 FN2450 SNP A -> T AC=1;AN=198;BQB=0.832857;DP=3908;DP4=1609,1747,2,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23847e-06;MQSB=0.0801116;RPB=0.419304;SGB=-16.1361;VDB=0.348694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.4:6703434 chr04:006703434 0 W/6703434-6703434 FN1392-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1410-S.SNP.4:6704485 chr04:006704485 0 W/6704485-6704485 FN1410-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1389-S.SNP.4:6706868 chr04:006706868 0 W/6706868-6706868 FN1389-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g12170 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2579-S.SNP.4:6707856 chr04:006707856 0 W/6707856-6707856 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.390522;DP=4146;DP4=2037,1841,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.65978e-12;MQSB=0.985047;RPB=0.332654;SGB=14.1348;VDB=0.495303;EFF=INTRON(MODIFIER||||518|LOC_Os04g12170|protein_coding|CODING|LOC_Os04g12170.1|3|1) FN1727-S.SNP.4:6709065 chr04:006709065 0 W/6709065-6709065 FN1727-S SNP C -> T AC=2;AN=188;BQB=0.146689;DP=2954;DP4=1318,1578,21,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00203114;MQB=1.84119e-14;MQSB=0.0891523;RPB=0.992464;SGB=-115.921;VDB=0.416261;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.4:6710422 chr04:006710422 0 W/6710422-6710422 FN552-S Single Base Substitution A-T INTRON HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN1662-S.SNP.4:6710518 chr04:006710518 0 W/6710518-6710518 FN1662-S Single Base Substitution G-A INTRON Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN1152-S.SNP.4:6711213 chr04:006711213 0 W/6711213-6711213 FN1152-S Single Base Substitution C-G INTRON HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN499-S.SNP.4:6712162 chr04:006712162 0 W/6712162-6712162 FN499-S Single Base Substitution C-T INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN545-S.SNP.4:6712162 chr04:006712162 0 W/6712162-6712162 FN545-S Single Base Substitution C-T INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3764-S.SNP.4:6713042 chr04:006713042 0 W/6713042-6713042 FN3764-S SNP T -> C AC=2;AN=190;BQB=0.947005;DP=1889;DP4=793,984,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41683e-10;MQSB=0.584308;RPB=0.145741;SGB=50.3161;VDB=0.443759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.4:6716227 chr04:006716227 0 W/6716227-6716227 FN3709-S SNP G -> A AC=2;AN=190;BQB=0.995102;DP=2923;DP4=1345,1463,16,9;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0047896;MQB=0.000494251;MQSB=0.0400297;RPB=0.352994;SGB=108.296;VDB=0.552171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S535N|587|LOC_Os04g12190|protein_coding|CODING|LOC_Os04g12190.1|3|1) FN2487.SNP.4:6719489 chr04:006719489 0 W/6719489-6719489 FN2487 SNP C -> T AC=2;AN=200;BQB=0.964887;DP=4070;DP4=1659,1908,28,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.56763e-23;MQSB=0.0959409;RPB=0.85337;SGB=121.561;VDB=0.385664;EFF=INTRON(MODIFIER||||95|LOC_Os04g12200|protein_coding|CODING|LOC_Os04g12200.1|1|1) FN4110-S.SNP.4:6719812 chr04:006719812 0 W/6719812-6719812 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.965165;DP=2853;DP4=1418,1311,16,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.23647e-14;MQSB=0.996273;RPB=0.990992;SGB=98.2417;VDB=0.660809;EFF=INTRON(MODIFIER||||95|LOC_Os04g12200|protein_coding|CODING|LOC_Os04g12200.1|1|1) FN3832-S.SNP.4:6726260 chr04:006726260 0 W/6726260-6726260 FN3832-S SNP C -> A AC=1;AN=190;BQB=0.841165;DP=4590;DP4=2711,1659,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0411765;MQB=0.809077;MQSB=0;RPB=0.72367;SGB=53.6492;VDB=0.869447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.4:6734281 chr04:006734281 0 W/6734281-6734281 FN2678-S SNP A -> T AC=1;AN=200;BQB=0.805508;DP=4538;DP4=1803,2473,8,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000220361;MQB=1.50906e-09;MQSB=0.0090826;RPB=0.998721;SGB=54.6902;VDB=0.436022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.4:6734282 chr04:006734282 0 W/6734282-6734282 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.94344;DP=4544;DP4=1888,2421,8,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00022007;MQB=8.81238e-12;MQSB=0.064526;RPB=0.939653;SGB=81.8956;VDB=0.524653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.4:6737560 chr04:006737560 0 W/6737560-6737560 FN3326-S SNP T -> C AC=1;AN=184;BQB=0.998647;DP=2833;DP4=1498,1253,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.202965;MQB=0.996063;MQSB=3.13745e-40;RPB=0.259736;SGB=62.3078;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.4:6738485 chr04:006738485 0 W/6738485-6738485 FN2749-S SNP G -> T AC=1;AN=200;BQB=0.589739;DP=3864;DP4=1753,1852,4,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00517598;MQB=0.000204116;MQSB=0.858701;RPB=0.819564;SGB=13.8539;VDB=0.317696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.4:6740712 chr04:006740712 0 W/6740712-6740712 FN1136-19-S Single Base Substitution C-G INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2332.SNP.4:6745174 chr04:006745174 0 W/6745174-6745174 FN2332 SNP G -> A AC=1;AN=192;BQB=0.923685;DP=4553;DP4=2244,2059,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000219635;MQB=4.69523e-08;MQSB=0.660475;RPB=0.321253;SGB=43.3444;VDB=0.293026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2306.SNP.4:6745699 chr04:006745699 0 W/6745699-6745699 FN2306 SNP G -> A AC=2;AN=192;BQB=0.16345;DP=5275;DP4=2721,2373,4,7;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.0216114;MQB=0.448212;MQSB=6.22984e-29;RPB=0.992529;SGB=44.6462;VDB=0.98298;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K112|708|LOC_Os04g12230|protein_coding|CODING|LOC_Os04g12230.1|2|1) FN1363-S.SNP.4:6746436 chr04:006746436 0 W/6746436-6746436 FN1363-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g12230 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2246-S.SNP.4:6746940 chr04:006746940 0 W/6746940-6746940 FN2246-S SNP C -> G AC=1;AN=190;BQB=0.999247;DP=4706;DP4=2140,2289,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000212495;MQB=1.55342e-05;MQSB=1.3269e-19;RPB=0.959182;SGB=28.7675;VDB=0.354882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P376R|708|LOC_Os04g12230|protein_coding|CODING|LOC_Os04g12230.1|5|1) FN3365-S.SNP.4:6748207 chr04:006748207 0 W/6748207-6748207 FN3365-S SNP C -> T AC=1;AN=184;BQB=0.260853;DP=2645;DP4=1101,1443,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000378072;MQB=1.2106e-09;MQSB=0.902667;RPB=0.8368;SGB=14.4113;VDB=0.97868;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D673|708|LOC_Os04g12230|protein_coding|CODING|LOC_Os04g12230.1|7|1) FN2185-S.SNP.4:6750959 chr04:006750959 0 W/6750959-6750959 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.793509;DP=6044;DP4=2686,2953,12,17;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00115817;MQB=0.00479448;MQSB=1.17486e-17;RPB=0.999968;SGB=-7.68321;VDB=0.840453;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D83|1587|LOC_Os04g12240|protein_coding|CODING|LOC_Os04g12240.1|2|1) FN-195.SNP.4:6753365 chr04:006753365 0 W/6753365-6753365 FN-195 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN-195.SNP.4:6753366 chr04:006753366 0 W/6753366-6753366 FN-195 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g12240 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN-256.SNP.4:6755623 chr04:006755623 0 W/6755623-6755623 FN-256 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g12240 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN4203-S.SNP.4:6759815 chr04:006759815 0 W/6759815-6759815 FN4203-S SNP G -> A AC=1;AN=170;BQB=0.679431;DP=2511;DP4=1230,1215,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000796495;MQB=1.46035e-06;MQSB=0.129069;RPB=0.676464;SGB=70.0854;VDB=0.641377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.4:6761469 chr04:006761469 0 W/6761469-6761469 FN2269-S SNP C -> T AC=1;AN=190;BQB=0.584597;DP=2527;DP4=1370,944,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00238661;MQSB=0.934091;RPB=0.0323992;SGB=25.439;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.4:6763121 chr04:006763121 0 W/6763121-6763121 FN3759-S SNP T -> A AC=2;AN=190;BQB=0.947186;DP=2191;DP4=759,1342,6,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.43678e-13;MQSB=0.00117878;RPB=0.403517;SGB=121.957;VDB=0.448469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.4:6766402 chr04:006766402 0 W/6766402-6766402 FN2357 SNP C -> T AC=1;AN=192;BQB=0.504434;DP=3911;DP4=2136,1622,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.0889798;MQB=0.586759;MQSB=0.999972;RPB=0.818877;SGB=99.4183;VDB=0.199647;EFF=INTRON(MODIFIER||||1450|LOC_Os04g12250|protein_coding|CODING|LOC_Os04g12250.1|1|1) FN3485-S.SNP.4:6766460 chr04:006766460 0 W/6766460-6766460 FN3485-S SNP T -> C AC=2;AN=184;BQB=0.92793;DP=3082;DP4=1989,943,12,10;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0.0441272;MQB=0.555286;MQSB=8.64824e-32;RPB=0.611779;SGB=67.4439;VDB=0.435049;EFF=INTRON(MODIFIER||||1450|LOC_Os04g12250|protein_coding|CODING|LOC_Os04g12250.1|1|1) FN1179-S.SNP.4:6774898 chr04:006774898 0 W/6774898-6774898 FN1179-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3698-S.SNP.4:6775231 chr04:006775231 0 W/6775231-6775231 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.35875;DP=2894;DP4=1239,1540,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.41776e-09;MQSB=0.914164;RPB=0.114449;SGB=33.8752;VDB=0.646185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.4:6776619 chr04:006776619 0 W/6776619-6776619 FN2251-S SNP C -> T AC=2;AN=190;BQB=0.999268;DP=4783;DP4=2607,1846,17,4;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.00940832;MQB=0.959993;MQSB=3.37917e-24;RPB=0.46528;SGB=64.5316;VDB=0.333431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.4:6778863 chr04:006778863 0 W/6778863-6778863 FN2298 SNP G -> A AC=1;AN=192;BQB=0.967504;DP=4588;DP4=2003,2314,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0505667;MQB=0.461027;MQSB=2.3779e-38;RPB=0.820286;SGB=72.0322;VDB=0.144039;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.4:6780429 chr04:006780429 0 W/6780429-6780429 FN2387 SNP G -> T AC=1;AN=192;BQB=0.972856;DP=4714;DP4=2161,2226,17,26;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.59969e-21;MQSB=0.992023;RPB=0.999281;SGB=0.468728;VDB=0.70772;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P222|569|LOC_Os04g12280|protein_coding|CODING|LOC_Os04g12280.1|2|1) FN-349.SNP.4:6780735 chr04:006780735 0 W/6780735-6780735 FN-349 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-349.SNP.4:6780736 chr04:006780736 0 W/6780736-6780736 FN-349 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g12280 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2677-S.SNP.4:6785098 chr04:006785098 0 W/6785098-6785098 FN2677-S SNP T -> C AC=1;AN=200;BQB=0.845974;DP=4662;DP4=2290,2122,9,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000429;MQB=3.51461e-09;MQSB=0.993439;RPB=0.423541;SGB=51.0851;VDB=0.633854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.4:6789834 chr04:006789834 0 W/6789834-6789834 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.57072;DP=3860;DP4=1798,1828,13,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.83783e-17;MQSB=0.982411;RPB=0.990201;SGB=-6.09922;VDB=0.514666;EFF=INTERGENIC(MODIFIER||||||||||1) FN4025-S.SNP.4:6790723 chr04:006790723 0 W/6790723-6790723 FN4025-S SNP C -> T AC=1;AN=168;BQB=0.757156;DP=2497;DP4=1330,1098,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.20815e-05;MQSB=0.9892;RPB=0.581962;SGB=24.4556;VDB=0.104744;EFF=INTRON(MODIFIER||||224|LOC_Os04g12300|protein_coding|CODING|LOC_Os04g12300.1|1|1) FN2411.SNP.4:6794737 chr04:006794737 0 W/6794737-6794737 FN2411 SNP C -> T AC=1;AN=200;BQB=0.955687;DP=4640;DP4=2206,2251,6,12;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0137931;MQB=0.304237;MQSB=0.32571;RPB=0.997277;SGB=77.2904;VDB=0.442372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V758I|1625|LOC_Os04g12310|protein_coding|CODING|LOC_Os04g12310.1|4|1) FN2676-S.SNP.4:6794965 chr04:006794965 0 W/6794965-6794965 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.929117;DP=5047;DP4=2358,2440,12,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0136715;MQB=0.000156345;MQSB=0.0101057;RPB=0.81142;SGB=-10.0844;VDB=0.0604249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S682P|1625|LOC_Os04g12310|protein_coding|CODING|LOC_Os04g12310.1|4|1) FN_N1-169-1.SNP.4:6796351 chr04:006796351 0 W/6796351-6796351 FN_N1-169-1 Single Base Substitution A-G Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN3365-S.SNP.4:6804520 chr04:006804520 0 W/6804520-6804520 FN3365-S SNP G -> A AC=1;AN=184;BQB=0.954201;DP=2404;DP4=1442,880,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.49325e-06;MQSB=0.013431;RPB=0.671303;SGB=66.8296;VDB=0.884131;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H421Y|1429|LOC_Os04g12320|protein_coding|CODING|LOC_Os04g12320.1|3|1) W416-6-1.SNP.4:6808338 chr04:006808338 0 W/6808338-6808338 W416-6-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3421-S.SNP.4:6808590 chr04:006808590 0 W/6808590-6808590 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.959924;DP=3569;DP4=1516,1511,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.60428e-07;MQSB=0.315008;RPB=0.748885;SGB=23.2751;VDB=0.0312318;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A101|141|LOC_Os04g12330|protein_coding|CODING|LOC_Os04g12330.1|1|1) FN3364-S.SNP.4:6809474 chr04:006809474 0 W/6809474-6809474 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.704379;DP=3284;DP4=1685,1441,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.35094e-06;MQSB=0.98483;RPB=0.0603998;SGB=57.786;VDB=0.0948553;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S121|154|LOC_Os04g12340|protein_coding|CODING|LOC_Os04g12340.1|1|1) FN2559-S.SNP.4:6809689 chr04:006809689 0 W/6809689-6809689 FN2559-S SNP T -> A AC=1;AN=198;BQB=0.139404;DP=3581;DP4=1653,1535,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000558503;MQB=7.66046e-05;MQSB=0.414473;RPB=0.517631;SGB=-33.4014;VDB=0.0266665;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R50W|154|LOC_Os04g12340|protein_coding|CODING|LOC_Os04g12340.1|1|1) FN3575-S.SNP.4:6809689 chr04:006809689 0 W/6809689-6809689 FN3575-S SNP T -> A AC=2;AN=188;BQB=0.877565;DP=3783;DP4=1755,1611,19,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00026434;MQB=3.4598e-14;MQSB=0.679042;RPB=0.945637;SGB=-44.6718;VDB=0.567765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R50W|154|LOC_Os04g12340|protein_coding|CODING|LOC_Os04g12340.1|1|1) FN3902-S.SNP.4:6809689 chr04:006809689 0 W/6809689-6809689 FN3902-S SNP T -> A AC=1;AN=158;BQB=0.752015;DP=2440;DP4=1095,1041,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000409836;MQB=1.53687e-05;MQSB=0.960254;RPB=0.999808;SGB=-16.5381;VDB=0.216676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R50W|154|LOC_Os04g12340|protein_coding|CODING|LOC_Os04g12340.1|1|1) FN3581-S.SNP.4:6818514 chr04:006818514 0 W/6818514-6818514 FN3581-S SNP A -> G AC=1;AN=190;BQB=0.97993;DP=2990;DP4=1408,1448,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0501672;MQB=0.0555811;MQSB=6.27212e-17;RPB=0.700395;SGB=25.439;VDB=0.270872;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.4:6819455 chr04:006819455 0 W/6819455-6819455 FN-162 Single Base Substitution C-G INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN3372-S.SNP.4:6819793 chr04:006819793 0 W/6819793-6819793 FN3372-S SNP T -> G AC=1;AN=184;BQB=0.993616;DP=3453;DP4=1421,1863,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0341732;MQB=0.81356;MQSB=0;RPB=0.361413;SGB=13.188;VDB=0.512353;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.4:6821733 chr04:006821733 0 W/6821733-6821733 FN956-S Single Base Substitution C-A INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN351-S.SNP.4:6821779 chr04:006821779 0 W/6821779-6821779 FN351-S Single Base Substitution G-A INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN3287-S.SNP.4:6825424 chr04:006825424 0 W/6825424-6825424 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.907158;DP=3105;DP4=1534,1456,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25031e-12;MQSB=0.927911;RPB=0.737032;SGB=84.9167;VDB=0.113683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.4:6826323 chr04:006826323 0 W/6826323-6826323 FN-132 Single Base Substitution G-T INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2740-S.SNP.4:6826323 chr04:006826323 0 W/6826323-6826323 FN2740-S SNP G -> T AC=1;AN=200;BQB=0.586145;DP=4949;DP4=2324,2368,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23447e-16;MQSB=0.473727;RPB=0.454699;SGB=108.768;VDB=0.300415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.4:6826752 chr04:006826752 0 W/6826752-6826752 FN1372-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN4050-S.SNP.4:6829844 chr04:006829844 0 W/6829844-6829844 FN4050-S SNP C -> A AC=2;AN=168;BQB=0.978103;DP=2500;DP4=994,1370,17,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.81343e-18;MQSB=0.988903;RPB=0.971306;SGB=99.9335;VDB=0.772278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R4L|89|LOC_Os04g12380|protein_coding|CODING|LOC_Os04g12380.1|1|1) FN3696-S.SNP.4:6831048 chr04:006831048 0 W/6831048-6831048 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.707744;DP=2572;DP4=1335,1150,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03078e-07;MQSB=0.980516;RPB=0.97556;SGB=46.7622;VDB=0.912922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.4:6849109 chr04:006849109 0 W/6849109-6849109 FN2556-S SNP C -> A AC=1;AN=198;BQB=0.0379568;DP=2074;DP4=1687,240,17,0;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.084378;MQB=0.967644;MQSB=0;RPB=0.674871;SGB=-13.8358;VDB=0.791477;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.4:6849419 chr04:006849419 0 W/6849419-6849419 FN-344 Single Base Substitution A-T INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN411-S.SNP.4:6852128 chr04:006852128 0 W/6852128-6852128 FN411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2657-S.SNP.4:6853547 chr04:006853547 0 W/6853547-6853547 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.956144;DP=4898;DP4=2372,2238,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204165;MQB=1.37125e-10;MQSB=0.915981;RPB=0.828857;SGB=51.0851;VDB=0.403705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T240I|491|LOC_Os04g12410|protein_coding|CODING|LOC_Os04g12410.1|1|1) FN2709-S.SNP.4:6859011 chr04:006859011 0 W/6859011-6859011 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.817046;DP=5042;DP4=2560,2156,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000198334;MQB=9.22966e-09;MQSB=0.925148;RPB=0.872732;SGB=6.27959;VDB=0.792573;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D227N|958|LOC_Os04g12420|protein_coding|CODING|LOC_Os04g12420.1|1|1) FN4260-S.SNP.4:6861955 chr04:006861955 0 W/6861955-6861955 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.902158;DP=2274;DP4=1159,1025,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.12698e-07;MQSB=0.991812;RPB=0.999631;SGB=43.4296;VDB=0.852963;EFF=INTRON(MODIFIER||||958|LOC_Os04g12420|protein_coding|CODING|LOC_Os04g12420.1|4|1) FN790-S.SNP.4:6869452 chr04:006869452 0 W/6869452-6869452 FN790-S Single Base Substitution T-C INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN521-S.SNP.4:6871254 chr04:006871254 0 W/6871254-6871254 FN521-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. W252-6-1.SNP.4:6873386 chr04:006873386 0 W/6873386-6873386 W252-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. W252-6-1.SNP.4:6873388 chr04:006873388 0 W/6873388-6873388 W252-6-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3945-S.SNP.4:6875818 chr04:006875818 0 W/6875818-6875818 FN3945-S SNP C -> T AC=2;AN=168;BQB=0.612993;DP=2572;DP4=1181,1258,21,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.05968e-15;MQSB=0.950275;RPB=0.109842;SGB=99.9335;VDB=0.587055;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F315|723|LOC_Os04g12440|protein_coding|CODING|LOC_Os04g12440.1|4|1) FN3486-S.SNP.4:6876332 chr04:006876332 0 W/6876332-6876332 FN3486-S SNP G -> T AC=2;AN=184;BQB=0.998794;DP=2536;DP4=1147,1316,8,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.41236e-17;MQSB=0.976294;RPB=0.98278;SGB=116.569;VDB=0.375121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A477S|723|LOC_Os04g12440|protein_coding|CODING|LOC_Os04g12440.1|5|1) FN3486-S.SNP.4:6876333 chr04:006876333 0 W/6876333-6876333 FN3486-S SNP C -> T AC=2;AN=184;BQB=0.941929;DP=2537;DP4=1160,1293,8,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.5278e-17;MQSB=0.981911;RPB=0.993035;SGB=116.569;VDB=0.385405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A477V|723|LOC_Os04g12440|protein_coding|CODING|LOC_Os04g12440.1|5|1) FN1727-S.SNP.4:6879045 chr04:006879045 0 W/6879045-6879045 FN1727-S SNP G -> C AC=2;AN=188;BQB=0.999845;DP=1404;DP4=790,568,11,3;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.21688e-06;MQSB=0.371407;RPB=0.230568;SGB=39.5276;VDB=0.552277;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.4:6879465 chr04:006879465 0 W/6879465-6879465 FN497-S Single Base Substitution T-C INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2375.SNP.4:6882204 chr04:006882204 0 W/6882204-6882204 FN2375 SNP T -> A AC=1;AN=192;BQB=0.664879;DP=4964;DP4=2514,2202,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.43858e-12;MQSB=0.670511;RPB=0.483859;SGB=61.1661;VDB=0.995436;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.4:6883817 chr04:006883817 0 W/6883817-6883817 FN3932-S SNP G -> T AC=1;AN=158;BQB=0.957797;DP=2480;DP4=1106,1278,1,11;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00443548;MQB=0.000244983;MQSB=0.0286727;RPB=0.697527;SGB=47.0672;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:6903783 chr04:006903783 0 W/6903783-6903783 FN3516-S SNP G -> C AC=1;AN=188;BQB=0.893292;DP=2451;DP4=1286,1115,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42755e-08;MQSB=0.979822;RPB=0.52279;SGB=43.0708;VDB=0.387204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S248C|338|LOC_Os04g12480|protein_coding|CODING|LOC_Os04g12480.1|8|1) FN403-S.SNP.4:6916273 chr04:006916273 0 W/6916273-6916273 FN403-S Single Base Substitution T-C INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-7.SNP.4:6916848 chr04:006916848 0 W/6916848-6916848 FN-7 Single Base Substitution G-A INTERGENIC Homo SNo: 7, Mutant_ID: FN-7, Generation: M2, Mutations: 27, Genes: 11, Seed availability: Yes. FN4166-S.SNP.4:6929709 chr04:006929709 0 W/6929709-6929709 FN4166-S SNP C -> G AC=1;AN=170;BQB=0.329061;DP=3838;DP4=2156,1549,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.00442939;MQB=0.335188;MQSB=0;RPB=0.775008;SGB=17.4413;VDB=0.989374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.4:6931618 chr04:006931618 0 W/6931618-6931618 FN2768-S SNP G -> T AC=1;AN=198;BQB=0.717904;DP=4311;DP4=2407,1677,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=1.23832e-11;MQSB=0.00516163;RPB=0.694196;SGB=123.071;VDB=0.601604;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.4:6933507 chr04:006933507 0 W/6933507-6933507 FN4041-S SNP G -> A AC=2;AN=168;BQB=0.897641;DP=2336;DP4=1090,1109,12,6;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.16199e-06;MQSB=0.955407;RPB=0.589229;SGB=29.4772;VDB=0.623607;EFF=INTERGENIC(MODIFIER||||||||||1) W279-4-1.SNP.4:6940698 chr04:006940698 0 W/6940698-6940698 W279-4-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN1047-S.SNP.4:6942766 chr04:006942766 0 W/6942766-6942766 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN317-S.SNP.4:6945052 chr04:006945052 0 W/6945052-6945052 FN317-S Single Base Substitution G-T INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3925-S.SNP.4:6946686 chr04:006946686 0 W/6946686-6946686 FN3925-S SNP C -> T AC=1;AN=158;BQB=0.999639;DP=1893;DP4=962,817,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0375066;MQB=0.0364957;MQSB=2.09812e-08;RPB=0.425562;SGB=64.5449;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.4:6946764 chr04:006946764 0 W/6946764-6946764 FN1224-S Single Base Substitution C-T INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1703-S.SNP.4:6959755 chr04:006959755 0 W/6959755-6959755 FN1703-S SNP C -> T AC=2;AN=188;BQB=0.0199312;DP=2834;DP4=1227,1570,13,6;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=0.0266149;MQSB=8.7056e-05;RPB=0.77865;SGB=-13.3699;VDB=0.616514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.4:6966229 chr04:006966229 0 W/6966229-6966229 FN3394-S SNP T -> G AC=2;AN=184;BQB=0.392876;DP=2813;DP4=1418,1290,6,13;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=0.00048906;MQSB=0.000209576;RPB=0.987245;SGB=56.8786;VDB=0.78507;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.4:7003751 chr04:007003751 0 W/7003751-7003751 FN_786-4-1 Single Base Substitution G-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN2471.SNP.4:7007943 chr04:007007943 0 W/7007943-7007943 FN2471 SNP A -> G AC=1;AN=200;BQB=0.750979;DP=4482;DP4=2344,1790,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.69375e-16;MQSB=0.937853;RPB=0.674223;SGB=65.9573;VDB=0.687038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.4:7009389 chr04:007009389 0 W/7009389-7009389 FN3656-S SNP G -> T AC=1;AN=190;BQB=0.793177;DP=3243;DP4=1243,1868,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000203365;MQSB=0.714513;RPB=0.647765;SGB=58.2031;VDB=0.727117;EFF=INTRON(MODIFIER||||301|LOC_Os04g12660|protein_coding|CODING|LOC_Os04g12660.1|1|1) FN742-S.SNP.4:7015641 chr04:007015641 0 W/7015641-7015641 FN742-S Single Base Substitution G-T INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3387-S.SNP.4:7019832 chr04:007019832 0 W/7019832-7019832 FN3387-S SNP G -> A AC=1;AN=184;BQB=0.610409;DP=2554;DP4=1111,1340,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.69762e-08;MQSB=0.466476;RPB=0.960482;SGB=0.715177;VDB=0.914306;EFF=INTRON(MODIFIER||||259|LOC_Os04g12669|protein_coding|CODING|LOC_Os04g12669.1|1|1) FN-182.SNP.4:7024148 chr04:007024148 0 W/7024148-7024148 FN-182 Single Base Substitution A-G INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-79.SNP.4:7025607 chr04:007025607 0 W/7025607-7025607 FN-79 Single Base Substitution C-T INTRON HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3699-S.SNP.4:7025649 chr04:007025649 0 W/7025649-7025649 FN3699-S SNP A -> C AC=1;AN=190;BQB=0.316955;DP=2470;DP4=1138,1215,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000262761;MQSB=0.0578382;RPB=0.989242;SGB=39.6545;VDB=0.508984;EFF=INTRON(MODIFIER||||253|LOC_Os04g12690|protein_coding|CODING|LOC_Os04g12690.1|2|1) FN3699-S.SNP.4:7033537 chr04:007033537 0 W/7033537-7033537 FN3699-S SNP T -> A AC=1;AN=190;BQB=0.493541;DP=2621;DP4=1199,1270,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11383e-11;MQSB=0.648717;RPB=0.923734;SGB=80.9724;VDB=0.88783;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.4:7034800 chr04:007034800 0 W/7034800-7034800 FN782-S Single Base Substitution T-C INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN-144.SNP.4:7038196 chr04:007038196 0 W/7038196-7038196 FN-144 Single Base Substitution A-G INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1678-S.SNP.4:7040184 chr04:007040184 0 W/7040184-7040184 FN1678-S SNP G -> A AC=1;AN=188;BQB=0.0715903;DP=3585;DP4=1796,1743,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0013947;MQB=0.124125;MQSB=0.0410475;RPB=0.914854;SGB=-203.962;VDB=0.730251;EFF=INTRON(MODIFIER||||325|LOC_Os04g12730|protein_coding|CODING|LOC_Os04g12730.1|1|1) FN485-S.SNP.4:7048372 chr04:007048372 0 W/7048372-7048372 FN485-S Single Base Substitution G-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN875-S.SNP.4:7056176 chr04:007056176 0 W/7056176-7056176 FN875-S Single Base Substitution C-G INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3541-S.SNP.4:7056921 chr04:007056921 0 W/7056921-7056921 FN3541-S SNP G -> A AC=1;AN=188;BQB=0.804516;DP=3512;DP4=1895,1529,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.0993736;MQB=0.765378;MQSB=0;RPB=0.907427;SGB=13.3597;VDB=0.79976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.4:7057064 chr04:007057064 0 W/7057064-7057064 FN2243-S SNP G -> T AC=1;AN=190;BQB=0.167628;DP=5075;DP4=2064,2598,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.0571429;MQB=0.342781;MQSB=1.08008e-05;RPB=0.953588;SGB=50.3161;VDB=0.842833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.4:7068837 chr04:007068837 0 W/7068837-7068837 FN2659-S SNP A -> C AC=1;AN=200;BQB=0.579901;DP=4662;DP4=1936,2476,16,14;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000643501;MQB=9.33483e-09;MQSB=0.931273;RPB=0.845833;SGB=132.552;VDB=0.20787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.4:7069808 chr04:007069808 0 W/7069808-7069808 FN3309-S SNP A -> G AC=1;AN=184;BQB=0.997578;DP=4090;DP4=2057,1856,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0359413;MQB=0.0651164;MQSB=1.45377e-09;RPB=0.792264;SGB=89.4385;VDB=0.753977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V123A|410|LOC_Os04g12780|protein_coding|CODING|LOC_Os04g12780.1|1|1) FN587-S.SNP.4:7085989 chr04:007085989 0 W/7085989-7085989 FN587-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g12830 expressed protein SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN1727-S.SNP.4:7087190 chr04:007087190 0 W/7087190-7087190 FN1727-S SNP G -> T AC=2;AN=188;BQB=0.106028;DP=3558;DP4=1582,1894,32,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.70135e-23;MQSB=0.999883;RPB=0.940543;SGB=-214.68;VDB=0.754528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R464L|574|LOC_Os04g12830|protein_coding|CODING|LOC_Os04g12830.1|2|1) FN_812-4-1.SNP.4:7094410 chr04:007094410 0 W/7094410-7094410 FN_812-4-1 Single Base Substitution T-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1290-S.SNP.4:7095303 chr04:007095303 0 W/7095303-7095303 FN1290-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN467-S.SNP.4:7095818 chr04:007095818 0 W/7095818-7095818 FN467-S Single Base Substitution C-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2782-S.SNP.4:7096917 chr04:007096917 0 W/7096917-7096917 FN2782-S SNP C -> G AC=1;AN=198;BQB=0.977986;DP=3631;DP4=1789,1554,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00110162;MQB=1.49592e-06;MQSB=0.870532;RPB=0.360747;SGB=43.7442;VDB=0.459099;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.4:7105600 chr04:007105600 0 W/7105600-7105600 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.283267;DP=3688;DP4=1773,1862,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000813449;MQB=9.06793e-10;MQSB=0.995474;RPB=0.999699;SGB=-67.7293;VDB=0.757163;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.4:7109247 chr04:007109247 0 W/7109247-7109247 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.576547;DP=2190;DP4=903,1183,7,17;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.31538e-11;MQSB=0.951304;RPB=0.0820802;SGB=15.8737;VDB=0.763751;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.4:7112225 chr04:007112225 0 W/7112225-7112225 FN4068-S SNP G -> T AC=1;AN=182;BQB=0.982167;DP=3514;DP4=1560,1879,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.0250427;MQB=0.0122281;MQSB=0.754753;RPB=0.939012;SGB=39.6007;VDB=0.505179;EFF=INTRON(MODIFIER||||550|LOC_Os04g12864|protein_coding|CODING|LOC_Os04g12864.1|2|1) FN1695-S.SNP.4:7119154 chr04:007119154 0 W/7119154-7119154 FN1695-S SNP G -> A AC=2;AN=188;BQB=0.539643;DP=1374;DP4=713,615,6,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3162e-08;MQSB=0.977038;RPB=0.961146;SGB=28.6195;VDB=0.350411;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A278|692|LOC_Os04g12880|protein_coding|CODING|LOC_Os04g12880.1|3|1) FN883-S.SNP.4:7120580 chr04:007120580 0 W/7120580-7120580 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN745-S.SNP.4:7121939 chr04:007121939 0 W/7121939-7121939 FN745-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN1099-S.SNP.4:7127219 chr04:007127219 0 W/7127219-7127219 FN1099-S Single Base Substitution T-G INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2739-S.SNP.4:7132589 chr04:007132589 0 W/7132589-7132589 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.998913;DP=4496;DP4=2126,2125,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.60246e-28;MQSB=0.98008;RPB=0.502795;SGB=152.03;VDB=0.705117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.4:7135508 chr04:007135508 0 W/7135508-7135508 FN3512-S SNP G -> C AC=1;AN=188;BQB=0.781789;DP=2906;DP4=1489,1182,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.7245e-07;MQSB=0.975806;RPB=0.128382;SGB=2.45162;VDB=0.35717;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.4:7136387 chr04:007136387 0 W/7136387-7136387 FN4249-S SNP T -> C AC=1;AN=170;BQB=0.382845;DP=2191;DP4=1019,1102,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.0036513;MQB=0.000917798;MQSB=0.0111416;RPB=0.267717;SGB=24.5502;VDB=0.268014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.4:7137114 chr04:007137114 0 W/7137114-7137114 FN1233-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN2686-S.SNP.4:7138341 chr04:007138341 0 W/7138341-7138341 FN2686-S SNP A -> T AC=1;AN=200;BQB=0.736248;DP=5197;DP4=2559,2433,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000192419;MQB=2.04254e-07;MQSB=0.970591;RPB=0.518923;SGB=29.4849;VDB=0.0758549;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.4:7140087 chr04:007140087 0 W/7140087-7140087 FN4009-S SNP G -> T AC=1;AN=168;BQB=0.307633;DP=2780;DP4=1369,1301,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.0324687;MQSB=0.0165688;RPB=0.949477;SGB=27.8864;VDB=0.769297;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.4:7150768 chr04:007150768 0 W/7150768-7150768 FN1669-S SNP A -> T AC=1;AN=188;BQB=0.971022;DP=3357;DP4=1536,1772,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.42586e-09;MQSB=0.232456;RPB=0.858416;SGB=10.1681;VDB=0.619577;EFF=INTRON(MODIFIER||||421|LOC_Os04g12950|protein_coding|CODING|LOC_Os04g12950.1|2|1) FN-157.SNP.4:7155182 chr04:007155182 0 W/7155182-7155182 FN-157 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN1521-S.SNP.4:7155682 chr04:007155682 0 W/7155682-7155682 FN1521-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g12960 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3716-S.SNP.4:7156339 chr04:007156339 0 W/7156339-7156339 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.932791;DP=2978;DP4=1553,1290,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.50363e-07;MQSB=0.0628163;RPB=0.196708;SGB=13.4442;VDB=0.11434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.4:7157141 chr04:007157141 0 W/7157141-7157141 FN1232-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN801-S.SNP.4:7160504 chr04:007160504 0 W/7160504-7160504 FN801-S Single Base Substitution A-G INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN-303.SNP.4:7161098 chr04:007161098 0 W/7161098-7161098 FN-303 Single Base Substitution A-T INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3293-S.SNP.4:7161098 chr04:007161098 0 W/7161098-7161098 FN3293-S SNP A -> T AC=1;AN=184;BQB=0.999551;DP=3012;DP4=1589,1317,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00706e-08;MQSB=0.99845;RPB=0.624624;SGB=49.835;VDB=0.348925;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.4:7161159 chr04:007161159 0 W/7161159-7161159 FN-53 Single Base Substitution T-C INTERGENIC HOMO SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2438.SNP.4:7162623 chr04:007162623 0 W/7162623-7162623 FN2438 SNP T -> C AC=1;AN=200;BQB=0.680098;DP=5068;DP4=2418,2385,4,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90794e-10;MQSB=0.988628;RPB=0.924924;SGB=47.4799;VDB=0.646535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.4:7164931 chr04:007164931 0 W/7164931-7164931 FN1758-S SNP G -> A AC=1;AN=188;BQB=0.655911;DP=2984;DP4=1679,1254,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.68002e-09;MQSB=0.848707;RPB=0.990525;SGB=33.7061;VDB=0.139324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G361D|490|LOC_Os04g12980|protein_coding|CODING|LOC_Os04g12980.1|2|1) FN2388.SNP.4:7169593 chr04:007169593 0 W/7169593-7169593 FN2388 SNP G -> T AC=2;AN=200;BQB=0.368793;DP=4673;DP4=2282,2083,33,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.89544e-33;MQSB=0.993114;RPB=0.963507;SGB=12.9121;VDB=0.841828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.4:7171982 chr04:007171982 0 W/7171982-7171982 FN-363 Single Base Substitution C-G INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2782-S.SNP.4:7181104 chr04:007181104 0 W/7181104-7181104 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.442439;DP=4017;DP4=1834,2001,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10183e-18;MQSB=0.881871;RPB=0.206023;SGB=136.856;VDB=0.80616;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V275|786|LOC_Os04g13020|protein_coding|CODING|LOC_Os04g13020.1|1|1) FN2696-S.SNP.4:7184219 chr04:007184219 0 W/7184219-7184219 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.999516;DP=6081;DP4=3430,2319,17,18;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0455517;MQB=0.636526;MQSB=0;RPB=0.474629;SGB=76.378;VDB=0.629816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1792D|2008|LOC_Os04g13030|protein_coding|CODING|LOC_Os04g13030.1|3|1) FN2196-S.SNP.4:7184908 chr04:007184908 0 W/7184908-7184908 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.0478669;DP=6465;DP4=2663,3293,15,17;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.0784223;MQB=0.50035;MQSB=3.06166e-10;RPB=0.562949;SGB=30.527;VDB=0.551252;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V1562|2008|LOC_Os04g13030|protein_coding|CODING|LOC_Os04g13030.1|3|1) FN-38.SNP.4:7186772 chr04:007186772 0 W/7186772-7186772 FN-38 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os04g13030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN3424-S.SNP.4:7190126 chr04:007190126 0 W/7190126-7190126 FN3424-S SNP G -> A AC=1;AN=184;BQB=0.945597;DP=3635;DP4=2243,1292,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.6007e-10;MQSB=0.0125023;RPB=0.726558;SGB=98.4821;VDB=0.235068;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.4:7193859 chr04:007193859 0 W/7193859-7193859 FN449-S Single Base Substitution C-G INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1709-S.SNP.4:7201639 chr04:007201639 0 W/7201639-7201639 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.0222638;DP=3793;DP4=2091,1665,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.1241e-09;MQSB=0.990705;RPB=0.993256;SGB=-153.343;VDB=0.947761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.4:7202386 chr04:007202386 0 W/7202386-7202386 FN2478 SNP A -> T AC=1;AN=200;BQB=0.653001;DP=4614;DP4=2244,2092,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80633e-07;MQSB=0.992616;RPB=0.235182;SGB=45.0543;VDB=0.28694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.4:7204239 chr04:007204239 0 W/7204239-7204239 FN1407-S Single Base Substitution C-T INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2754-S.SNP.4:7205014 chr04:007205014 0 W/7205014-7205014 FN2754-S SNP C -> G AC=1;AN=200;BQB=0.267883;DP=4764;DP4=2271,2278,2,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29348e-05;MQSB=0.819144;RPB=0.98268;SGB=31.2392;VDB=0.49286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.4:7207641 chr04:007207641 0 W/7207641-7207641 FN3424-S SNP A -> C AC=1;AN=184;BQB=0.993048;DP=2830;DP4=1400,1325,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.88488e-11;MQSB=0.999827;RPB=0.999173;SGB=33.3622;VDB=0.236144;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.4:7208996 chr04:007208996 0 W/7208996-7208996 FN882-S Single Base Substitution G-A INTERGENIC HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN3400-S.SNP.4:7209572 chr04:007209572 0 W/7209572-7209572 FN3400-S SNP T -> G AC=1;AN=184;BQB=0.785912;DP=2736;DP4=1430,1230,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000149972;MQSB=0.998774;RPB=0.707062;SGB=25.1826;VDB=0.439806;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.4:7214526 chr04:007214526 0 W/7214526-7214526 FN947-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g13080 retrotransposon, putative, centromere-specific, expressed SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1158-S.SNP.4:7214724 chr04:007214724 0 W/7214724-7214724 FN1158-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g13080 retrotransposon, putative, centromere-specific, expressed SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3507-S.SNP.4:7220630 chr04:007220630 0 W/7220630-7220630 FN3507-S SNP C -> A AC=1;AN=188;BQB=0.219752;DP=2569;DP4=1144,1315,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.70642e-07;MQSB=0.818203;RPB=0.159806;SGB=46.6141;VDB=0.769168;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.4:7221917 chr04:007221917 0 W/7221917-7221917 FN1355-S Single Base Substitution A-C INTRON HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. W247-2-1.SNP.4:7222760 chr04:007222760 0 W/7222760-7222760 W247-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1438-S.SNP.4:7226392 chr04:007226392 0 W/7226392-7226392 FN1438-S Single Base Substitution C-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1684-S.SNP.4:7237537 chr04:007237537 0 W/7237537-7237537 FN1684-S SNP C -> T AC=1;AN=188;BQB=0.930775;DP=1233;DP4=746,446,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00011163;MQSB=0.339721;RPB=0.999966;SGB=14.7255;VDB=0.834632;EFF=INTRON(MODIFIER||||1421|LOC_Os04g13110|protein_coding|CODING|LOC_Os04g13110.1|1|1) FN1288-S.SNP.4:7238808 chr04:007238808 0 W/7238808-7238808 FN1288-S Single Base Substitution G-A INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3698-S.SNP.4:7238808 chr04:007238808 0 W/7238808-7238808 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.981109;DP=4360;DP4=1992,2214,21,5;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.242202;MQB=0.00793402;MQSB=8.6924e-26;RPB=0.0432999;SGB=112.85;VDB=0.335357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.4:7238808 chr04:007238808 0 W/7238808-7238808 FN3997-S SNP G -> A AC=1;AN=168;BQB=0.984411;DP=4147;DP4=1940,2017,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.236074;MQB=0.023728;MQSB=4.41539e-25;RPB=0.501384;SGB=48.9237;VDB=0.73408;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.4:7238808 chr04:007238808 0 W/7238808-7238808 FN467-S Single Base Substitution G-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.4:7238808 chr04:007238808 0 W/7238808-7238808 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1717-S.SNP.4:7244385 chr04:007244385 0 W/7244385-7244385 FN1717-S SNP G -> T AC=1;AN=188;BQB=0.793992;DP=3671;DP4=1774,1854,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.50693e-10;MQSB=0.98428;RPB=0.905735;SGB=17.8846;VDB=0.64766;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.4:7247804 chr04:007247804 0 W/7247804-7247804 FN543-S Single Base Substitution G-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN891-S.SNP.4:7257868 chr04:007257868 0 W/7257868-7257868 FN891-S Single Base Substitution A-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN419-S.SNP.4:7257903 chr04:007257903 0 W/7257903-7257903 FN419-S Single Base Substitution C-T INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2441.SNP.4:7262068 chr04:007262068 0 W/7262068-7262068 FN2441 SNP C -> T AC=2;AN=200;BQB=0.569444;DP=3772;DP4=1783,1675,16,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=6.75446e-14;MQSB=0.299737;RPB=0.949038;SGB=169.394;VDB=0.463755;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q182|519|LOC_Os04g13160|protein_coding|CODING|LOC_Os04g13160.1|1|1) FN2401.SNP.4:7265151 chr04:007265151 0 W/7265151-7265151 FN2401 SNP C -> T AC=2;AN=200;BQB=0.973139;DP=4843;DP4=2297,2225,25,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.20935e-31;MQSB=0.745015;RPB=0.68649;SGB=64.0657;VDB=0.845183;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.4:7266864 chr04:007266864 0 W/7266864-7266864 FN4049-S SNP C -> T AC=2;AN=168;BQB=0.778862;DP=3215;DP4=1378,1666,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.28965e-12;MQSB=0.657178;RPB=0.999974;SGB=86.2102;VDB=0.298813;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V120|524|LOC_Os04g13170|protein_coding|CODING|LOC_Os04g13170.1|1|1) FN2434.SNP.4:7271524 chr04:007271524 0 W/7271524-7271524 FN2434 SNP C -> T AC=1;AN=200;BQB=0.412735;DP=4569;DP4=2175,2190,5,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000437733;MQB=8.93365e-06;MQSB=0.09997;RPB=0.562606;SGB=45.0543;VDB=0.206418;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|10|1) FN1532-S.SNP.4:7272963 chr04:007272963 0 W/7272963-7272963 FN1532-S Single Base Substitution C-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN-371.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN-371 Single Base Substitution G-A INTRON HOMO SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1667-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN1667-S SNP G -> A AC=1;AN=188;BQB=0.85151;DP=2355;DP4=1252,1066,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24732e-08;MQSB=0.965177;RPB=0.98514;SGB=23.5329;VDB=0.962413;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|2|1) FN260-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN260-S Single Base Substitution G-A INTRON HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN282-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN282-S Single Base Substitution G-A INTRON HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3301-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.624156;DP=2951;DP4=1250,1624,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97175e-07;MQSB=0.917525;RPB=0.419264;SGB=42.7914;VDB=0.271244;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|2|1) FN3436-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN3436-S SNP G -> A AC=2;AN=184;BQB=0.621813;DP=2950;DP4=1171,1680,21,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.84768e-24;MQSB=0.957656;RPB=0.378328;SGB=144.923;VDB=0.484226;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|2|1) FN3528-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN3528-S SNP G -> A AC=2;AN=188;BQB=0.872763;DP=2831;DP4=1180,1563,16,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.29927e-29;MQSB=0.860089;RPB=0.855359;SGB=211.56;VDB=0.454414;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|2|1) FN3863-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN3863-S SNP G -> A AC=2;AN=158;BQB=0.609324;DP=2491;DP4=1089,1313,18,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.55107e-15;MQSB=0.74592;RPB=0.841218;SGB=87.9846;VDB=0.927024;EFF=INTRON(MODIFIER||||1021|LOC_Os04g13180|protein_coding|CODING|LOC_Os04g13180.1|2|1) FN511-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN511-S Single Base Substitution G-A INTRON HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN530-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN530-S Single Base Substitution G-A INTRON HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN752-S.SNP.4:7279312 chr04:007279312 0 W/7279312-7279312 FN752-S Single Base Substitution G-A INTRON HOMO SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN3780-S.SNP.4:7286479 chr04:007286479 0 W/7286479-7286479 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.698402;DP=2697;DP4=1308,1305,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000370782;MQB=0.00477241;MQSB=0.197266;RPB=0.568258;SGB=32.5467;VDB=0.345999;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.4:7289247 chr04:007289247 0 W/7289247-7289247 FN1716-S SNP G -> T AC=2;AN=188;BQB=0.807168;DP=3067;DP4=1875,1145,22,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.65322e-18;MQSB=0.939524;RPB=0.999998;SGB=144.388;VDB=0.600764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.4:7294607 chr04:007294607 0 W/7294607-7294607 FN2751-S SNP A -> G AC=1;AN=200;BQB=0.0722733;DP=7263;DP4=2874,4019,7,15;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0457111;MQB=0.348047;MQSB=2.68878e-23;RPB=0.998246;SGB=-117.09;VDB=0.938796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.4:7295672 chr04:007295672 0 W/7295672-7295672 FN1916 Single Base Substitution G-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2175-S.SNP.4:7296742 chr04:007296742 0 W/7296742-7296742 FN2175-S SNP G -> C AC=2;AN=168;BQB=0.465651;DP=2153;DP4=677,1413,7,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.31794e-09;MQSB=0.980989;RPB=0.720178;SGB=12.7756;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.4:7301071 chr04:007301071 0 W/7301071-7301071 FN318-S Single Base Substitution G-T INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1190-S.SNP.4:7301078 chr04:007301078 0 W/7301078-7301078 FN1190-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN911-S.SNP.4:7301785 chr04:007301785 0 W/7301785-7301785 FN911-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2280-S.SNP.4:7316267 chr04:007316267 0 W/7316267-7316267 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.207402;DP=5353;DP4=2784,2226,16,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23454e-09;MQSB=0.690421;RPB=0.554483;SGB=38.983;VDB=0.0233942;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.4:7318829 chr04:007318829 0 W/7318829-7318829 FN4312-S SNP C -> A AC=2;AN=170;BQB=0.971637;DP=2257;DP4=1071,1123,11,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.0282e-11;MQSB=0.992812;RPB=0.227815;SGB=70.0854;VDB=0.0177931;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E1235*|1512|LOC_Os04g13220|protein_coding|CODING|LOC_Os04g13220.1|7|1);LOF=(LOC_Os04g13220|LOC_Os04g13220|1|1.00);NMD=(LOC_Os04g13220|LOC_Os04g13220|1|1.00) FN4312-S.SNP.4:7318830 chr04:007318830 0 W/7318830-7318830 FN4312-S SNP C -> T AC=2;AN=170;BQB=0.921371;DP=2263;DP4=1072,1138,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.17621e-12;MQSB=0.989534;RPB=0.492532;SGB=55.5339;VDB=0.159863;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V1234|1512|LOC_Os04g13220|protein_coding|CODING|LOC_Os04g13220.1|7|1) FN2790-S.SNP.4:7324996 chr04:007324996 0 W/7324996-7324996 FN2790-S SNP G -> T AC=1;AN=198;BQB=0.471496;DP=3846;DP4=1674,1977,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06642e-05;MQSB=0.898476;RPB=0.210331;SGB=32.9588;VDB=0.567407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A226E|1512|LOC_Os04g13220|protein_coding|CODING|LOC_Os04g13220.1|1|1) FN1720-S.SNP.4:7325159 chr04:007325159 0 W/7325159-7325159 FN1720-S SNP C -> T AC=2;AN=188;BQB=0.309008;DP=1400;DP4=732,607,6,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28685e-06;MQSB=0.835362;RPB=0.248096;SGB=62.6088;VDB=0.604541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A172T|1512|LOC_Os04g13220|protein_coding|CODING|LOC_Os04g13220.1|1|1) FN2541-S.SNP.4:7326417 chr04:007326417 0 W/7326417-7326417 FN2541-S SNP A -> T AC=1;AN=198;BQB=0.997052;DP=4146;DP4=2008,1944,13,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.62929e-17;MQSB=0.209425;RPB=0.41327;SGB=132.261;VDB=0.413968;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.4:7326673 chr04:007326673 0 W/7326673-7326673 FN3740-S SNP C -> A AC=1;AN=190;BQB=0.483571;DP=2687;DP4=1237,1336,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.58202e-05;MQSB=0.970734;RPB=0.630884;SGB=13.4442;VDB=0.947221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.4:7330093 chr04:007330093 0 W/7330093-7330093 FN3748-S SNP G -> A AC=2;AN=190;BQB=0.883703;DP=2056;DP4=994,969,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.88006e-09;MQSB=0.988623;RPB=0.958705;SGB=80.9724;VDB=0.914038;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.4:7330762 chr04:007330762 0 W/7330762-7330762 W23-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-190.SNP.4:7333035 chr04:007333035 0 W/7333035-7333035 FN-190 Single Base Substitution C-T INTRON HOMO SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3967-S.SNP.4:7337687 chr04:007337687 0 W/7337687-7337687 FN3967-S SNP T -> G AC=1;AN=182;BQB=0.881753;DP=2701;DP4=1504,1108,7,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.34456e-09;MQSB=0.999743;RPB=0.548678;SGB=35.6984;VDB=0.651329;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.4:7345901 chr04:007345901 0 W/7345901-7345901 FN-111 Single Base Substitution C-T INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1669-S.SNP.4:7346744 chr04:007346744 0 W/7346744-7346744 FN1669-S SNP C -> T AC=1;AN=188;BQB=0.663587;DP=3725;DP4=1940,1738,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.12497e-13;MQSB=0.999471;RPB=0.84564;SGB=51.5091;VDB=0.249454;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.4:7347523 chr04:007347523 0 W/7347523-7347523 FN4179-S SNP A -> T AC=1;AN=170;BQB=0.999985;DP=2436;DP4=1222,1115,12,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.84818e-14;MQSB=0.99841;RPB=0.728702;SGB=44.3104;VDB=0.519551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.4:7350202 chr04:007350202 0 W/7350202-7350202 FN3694-S SNP C -> T AC=1;AN=190;BQB=0.880656;DP=1919;DP4=952,871,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.42202e-05;MQSB=0.961168;RPB=0.409943;SGB=26.3271;VDB=0.173752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.4:7355679 chr04:007355679 0 W/7355679-7355679 FN2470 SNP T -> A AC=2;AN=200;BQB=0.999974;DP=5018;DP4=2488,2263,25,11;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.000199283;MQB=1.8051e-19;MQSB=0.0670426;RPB=0.972106;SGB=119.583;VDB=0.362397;EFF=INTRON(MODIFIER||||111|LOC_Os04g13260|protein_coding|CODING|LOC_Os04g13260.1|3|1) FN-278.SNP.4:7357479 chr04:007357479 0 W/7357479-7357479 FN-278 Single Base Substitution T-C INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2617-S.SNP.4:7367624 chr04:007367624 0 W/7367624-7367624 FN2617-S SNP T -> A AC=1;AN=198;BQB=0.186209;DP=4545;DP4=2354,2024,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.07067e-15;MQSB=0.999577;RPB=0.490064;SGB=109.285;VDB=0.0863868;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.4:7371255 chr04:007371255 0 W/7371255-7371255 FN1228-S Single Base Substitution C-G INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2280-S.SNP.4:7373182 chr04:007373182 0 W/7373182-7373182 FN2280-S SNP G -> T AC=1;AN=190;BQB=0.186137;DP=4823;DP4=2307,2189,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08899e-06;MQSB=0.991662;RPB=0.843996;SGB=-88.76;VDB=0.434801;EFF=INTRON(MODIFIER||||531|LOC_Os04g13290|protein_coding|CODING|LOC_Os04g13290.1|4|1) FN757-S.SNP.4:7373646 chr04:007373646 0 W/7373646-7373646 FN757-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN476-S.SNP.4:7377208 chr04:007377208 0 W/7377208-7377208 FN476-S Single Base Substitution T-A INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN4047-S.SNP.4:7379172 chr04:007379172 0 W/7379172-7379172 FN4047-S SNP T -> A AC=1;AN=168;BQB=0.995296;DP=2205;DP4=615,1474,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000411936;MQSB=0.137858;RPB=0.843867;SGB=30.0193;VDB=0.720622;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.4:7382806 chr04:007382806 0 W/7382806-7382806 FN1301-S Single Base Substitution C-A INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3798-S.SNP.4:7385158 chr04:007385158 0 W/7385158-7385158 FN3798-S SNP T -> C AC=1;AN=190;BQB=0.0558588;DP=2162;DP4=829,1027,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000462535;MQB=0.00360563;MQSB=6.23007e-08;RPB=0.760517;SGB=-100.524;VDB=0.0663243;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.4:7385481 chr04:007385481 0 W/7385481-7385481 FN-288 Single Base Substitution C-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2326.SNP.4:7387110 chr04:007387110 0 W/7387110-7387110 FN2326 SNP C -> T AC=2;AN=192;BQB=0.999985;DP=3906;DP4=1802,1723,15,13;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.000256016;MQB=6.27446e-07;MQSB=0.824357;RPB=0.0745407;SGB=24.5626;VDB=0.187734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.4:7391704 chr04:007391704 0 W/7391704-7391704 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.911103;DP=2644;DP4=1300,1262,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.46191e-13;MQSB=0.957752;RPB=0.926174;SGB=80.782;VDB=0.93537;EFF=INTRON(MODIFIER||||68|LOC_Os04g13300|protein_coding|CODING|LOC_Os04g13300.1|1|1) FN3594-S.SNP.4:7391705 chr04:007391705 0 W/7391705-7391705 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.671386;DP=2653;DP4=1318,1270,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.2e-12;MQSB=0.965184;RPB=0.998842;SGB=60.7873;VDB=0.958726;EFF=INTRON(MODIFIER||||68|LOC_Os04g13300|protein_coding|CODING|LOC_Os04g13300.1|1|1) FN1916.SNP.4:7398065 chr04:007398065 0 W/7398065-7398065 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN3345-S.SNP.4:7398906 chr04:007398906 0 W/7398906-7398906 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.865698;DP=3712;DP4=1996,1592,16,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000538793;MQB=1.05528e-10;MQSB=0.591887;RPB=0.507976;SGB=84.9167;VDB=0.275132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G527R|904|LOC_Os04g13310|protein_coding|CODING|LOC_Os04g13310.1|2|1) FN3674-S.SNP.4:7399171 chr04:007399171 0 W/7399171-7399171 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.999984;DP=1902;DP4=880,953,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.20347;MQB=0.164178;MQSB=0;RPB=0.966591;SGB=28.9929;VDB=0.396784;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A615V|904|LOC_Os04g13310|protein_coding|CODING|LOC_Os04g13310.1|2|1) FN4235-S.SNP.4:7401771 chr04:007401771 0 W/7401771-7401771 FN4235-S SNP C -> A AC=1;AN=170;BQB=0.968937;DP=2400;DP4=1059,1288,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.000833333;MQB=0.672777;MQSB=1.37127e-16;RPB=0.176766;SGB=38.987;VDB=0.00917488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A980S|1348|LOC_Os04g13320|protein_coding|CODING|LOC_Os04g13320.1|3|1) FN1713-S.SNP.4:7411300 chr04:007411300 0 W/7411300-7411300 FN1713-S SNP C -> T AC=1;AN=188;BQB=0.00103388;DP=6441;DP4=3671,2705,16,17;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.0721938;MQB=0.734627;MQSB=0;RPB=0.329117;SGB=-155.916;VDB=0.801027;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A293T|449|LOC_Os04g13330|protein_coding|CODING|LOC_Os04g13330.1|1|1) FN2403.SNP.4:7416145 chr04:007416145 0 W/7416145-7416145 FN2403 SNP C -> T AC=1;AN=200;BQB=0.212111;DP=4707;DP4=2347,2064,7,6;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.025069;MQB=0.84053;MQSB=0.256021;RPB=0.767107;SGB=36.6644;VDB=0.771836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E243K|356|LOC_Os04g13340|protein_coding|CODING|LOC_Os04g13340.1|1|1) FN-329.SNP.4:7419975 chr04:007419975 0 W/7419975-7419975 FN-329 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3716-S.SNP.4:7420778 chr04:007420778 0 W/7420778-7420778 FN3716-S SNP T -> C AC=1;AN=190;BQB=0.967588;DP=2422;DP4=1132,1130,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000285499;MQSB=0.00196391;RPB=0.979149;SGB=62.7569;VDB=0.517146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I527V|1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|3|1) FN-14.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN-14 Single Base Substitution C-T INTRON Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-75.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN-75 Single Base Substitution C-T INTRON HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1381-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN1381-S Single Base Substitution C-T INTRON HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1712-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN1712-S SNP C -> T AC=2;AN=188;BQB=0.537946;DP=1699;DP4=764,886,9,7;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=0.000924334;MQSB=0.440143;RPB=0.628705;SGB=26.0762;VDB=0.974821;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|2|1) FN2617-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN2617-S SNP C -> T AC=2;AN=198;BQB=0.20052;DP=3755;DP4=1759,1784,25,35;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=2.73132e-25;MQSB=4.79568e-05;RPB=0.859169;SGB=126.216;VDB=0.000929997;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|2|1) FN2660-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN2660-S SNP C -> T AC=2;AN=200;BQB=0.975589;DP=4735;DP4=2188,2287,23,24;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=2.17408e-17;MQSB=2.40855e-05;RPB=0.906731;SGB=159.24;VDB=0.510691;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|2|1) FN3829-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.633917;DP=2978;DP4=1381,1516,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.33548e-05;MQSB=1.68519e-07;RPB=0.998373;SGB=36.1006;VDB=0.735684;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|2|1) FN3985-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN3985-S SNP C -> T AC=2;AN=168;BQB=0.999783;DP=2721;DP4=1181,1427,20,27;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=3.84636e-17;MQSB=1.54173e-05;RPB=0.980545;SGB=169.517;VDB=0.167849;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|2|1) FN979-S.SNP.4:7420905 chr04:007420905 0 W/7420905-7420905 FN979-S Single Base Substitution C-T INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2151-S.SNP.4:7422407 chr04:007422407 0 W/7422407-7422407 FN2151-S SNP G -> C AC=1;AN=168;BQB=0.758521;DP=2477;DP4=1498,927,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0104966;MQB=0.231936;MQSB=0.000102048;RPB=0.757968;SGB=8.48315;VDB=0.752323;EFF=INTRON(MODIFIER||||1287|LOC_Os04g13350|protein_coding|CODING|LOC_Os04g13350.1|1|1) CW-631-3-1.SNP.4:7422988 chr04:007422988 0 W/7422988-7422988 CW-631-3-1 Single Base Substitution A-G INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2659-S.SNP.4:7424000 chr04:007424000 0 W/7424000-7424000 FN2659-S SNP T -> C AC=1;AN=200;BQB=0.981223;DP=4511;DP4=2536,1597,14,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00399025;MQB=0.637344;MQSB=0.000201503;RPB=0.8005;SGB=47.7211;VDB=0.122042;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.4:7425409 chr04:007425409 0 W/7425409-7425409 FN1029-S Single Base Substitution A-G INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2730-S.SNP.4:7425975 chr04:007425975 0 W/7425975-7425975 FN2730-S SNP G -> C AC=1;AN=200;BQB=0.935279;DP=4847;DP4=2262,2378,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78332e-07;MQSB=0.983749;RPB=0.839444;SGB=24.2746;VDB=0.197583;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.4:7434667 chr04:007434667 0 W/7434667-7434667 FN4089-S SNP T -> G AC=1;AN=182;BQB=0.770505;DP=2185;DP4=675,1446,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.2194e-05;MQSB=1.5225e-05;RPB=0.808715;SGB=28.6061;VDB=0.136643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Gcg|S813A|1873|LOC_Os04g13364|protein_coding|CODING|LOC_Os04g13364.1|12|1) FN1546-S.SNP.4:7447360 chr04:007447360 0 W/7447360-7447360 FN1546-S Single Base Substitution G-A INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1755-S.SNP.4:7451312 chr04:007451312 0 W/7451312-7451312 FN1755-S SNP A -> T AC=1;AN=188;BQB=0.382773;DP=2453;DP4=1170,1247,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0860171;MQB=0.915676;MQSB=0;RPB=0.997168;SGB=35.9843;VDB=0.658761;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N331I|473|LOC_Os04g13390|protein_coding|CODING|LOC_Os04g13390.1|2|1) FN242-S.SNP.4:7451372 chr04:007451372 0 W/7451372-7451372 FN242-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g13390 retrotransposon protein, putative, unclassified SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN-125.SNP.4:7453152 chr04:007453152 0 W/7453152-7453152 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2293.SNP.4:7468946 chr04:007468946 0 W/7468946-7468946 FN2293 SNP G -> A AC=2;AN=192;BQB=0.917506;DP=5191;DP4=2402,2455,20,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.69889e-15;MQSB=0.0183751;RPB=0.9999;SGB=90.4583;VDB=0.145913;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.4:7469520 chr04:007469520 0 W/7469520-7469520 FN566-S Single Base Substitution G-A INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2676-S.SNP.4:7470993 chr04:007470993 0 W/7470993-7470993 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.931613;DP=4737;DP4=2286,2261,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00588e-10;MQSB=0.989765;RPB=0.559404;SGB=54.6902;VDB=0.214472;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.4:7475974 chr04:007475974 0 W/7475974-7475974 FN2596-S SNP A -> C AC=2;AN=198;BQB=0.76633;DP=4244;DP4=2166,1827,19,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.90753e-21;MQSB=0.930343;RPB=0.991151;SGB=133.622;VDB=0.651211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.4:7489504 chr04:007489504 0 W/7489504-7489504 FN1234-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN-307.SNP.4:7493384 chr04:007493384 0 W/7493384-7493384 FN-307 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g13460 expressed protein SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2321.SNP.4:7500245 chr04:007500245 0 W/7500245-7500245 FN2321 SNP T -> C AC=1;AN=192;BQB=0.133869;DP=4685;DP4=2163,2132,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.39848e-11;MQSB=0.44618;RPB=0.95744;SGB=30.82;VDB=0.83333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.4:7503183 chr04:007503183 0 W/7503183-7503183 FN2221-S SNP T -> C AC=1;AN=190;BQB=0.877479;DP=4705;DP4=2053,2219,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.99155e-13;MQSB=0.879828;RPB=0.799349;SGB=61.9679;VDB=0.879346;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.4:7514772 chr04:007514772 0 W/7514772-7514772 FN812-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3958-S.SNP.4:7520178 chr04:007520178 0 W/7520178-7520178 FN3958-S SNP T -> C AC=2;AN=168;BQB=0.892876;DP=2496;DP4=1215,1191,19,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.55658e-14;MQSB=0.908723;RPB=0.976771;SGB=114.204;VDB=0.175438;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.4:7521408 chr04:007521408 0 W/7521408-7521408 FN982-S Single Base Substitution T-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2551-S.SNP.4:7528738 chr04:007528738 0 W/7528738-7528738 FN2551-S SNP T -> A AC=2;AN=198;BQB=0.789147;DP=3889;DP4=1764,1877,27,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.06561e-26;MQSB=0.980598;RPB=0.550666;SGB=158.788;VDB=0.283168;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A131|218|LOC_Os04g13500|protein_coding|CODING|LOC_Os04g13500.1|1|1) FN3443-S.SNP.4:7529436 chr04:007529436 0 W/7529436-7529436 FN3443-S SNP A -> C AC=2;AN=184;BQB=0.984972;DP=2891;DP4=1214,1584,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12244e-14;MQSB=0.999999;RPB=0.988255;SGB=98.4821;VDB=0.946789;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.4:7541119 chr04:007541119 0 W/7541119-7541119 FN-196 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2325.SNP.4:7542953 chr04:007542953 0 W/7542953-7542953 FN2325 SNP C -> T AC=2;AN=192;BQB=0.998476;DP=4974;DP4=2223,2408,16,21;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00160836;MQB=2.80712e-14;MQSB=0.186146;RPB=0.946391;SGB=121.76;VDB=0.160938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.4:7544257 chr04:007544257 0 W/7544257-7544257 FN2392 SNP T -> C AC=1;AN=200;BQB=0.944584;DP=4802;DP4=2237,2239,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31387e-07;MQSB=0.864982;RPB=0.763166;SGB=45.0543;VDB=0.297961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.4:7545585 chr04:007545585 0 W/7545585-7545585 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.944912;DP=4651;DP4=2233,2186,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.85823e-15;MQSB=0.978338;RPB=0.107925;SGB=109.527;VDB=0.518516;EFF=INTRON(MODIFIER||||446|LOC_Os04g13530|protein_coding|CODING|LOC_Os04g13530.1|1|1) FN-221.SNP.4:7550371 chr04:007550371 0 W/7550371-7550371 FN-221 Single Base Substitution G-A INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3297-S.SNP.4:7553110 chr04:007553110 0 W/7553110-7553110 FN3297-S SNP T -> A AC=2;AN=184;BQB=0.899269;DP=3365;DP4=1615,1628,17,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.28166e-17;MQSB=0.996858;RPB=0.990878;SGB=109.705;VDB=0.495679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.4:7557454 chr04:007557454 0 W/7557454-7557454 FN2102-S SNP T -> A AC=2;AN=168;BQB=0.0272697;DP=2987;DP4=2130,808,36,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.4071e-20;MQSB=0.839807;RPB=0.697928;SGB=-6.32537;VDB=0.719233;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.4:7557454 chr04:007557454 0 W/7557454-7557454 FN4037-S SNP T -> A AC=2;AN=168;BQB=0.937843;DP=2419;DP4=1183,1100,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.09301e-15;MQSB=0.899348;RPB=0.999988;SGB=79.3486;VDB=0.521862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.4:7562937 chr04:007562937 0 W/7562937-7562937 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.744055;DP=4901;DP4=2245,2390,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020404;MQB=1.41637e-09;MQSB=0.915827;RPB=0.922781;SGB=14.3054;VDB=0.416701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S384F|928|LOC_Os04g13550|protein_coding|CODING|LOC_Os04g13550.1|2|1) FN3323-S.SNP.4:7563000 chr04:007563000 0 W/7563000-7563000 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.985688;DP=2896;DP4=1339,1484,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.23562e-05;MQSB=0.8321;RPB=0.675227;SGB=30.6558;VDB=0.674881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G363D|928|LOC_Os04g13550|protein_coding|CODING|LOC_Os04g13550.1|2|1) FN860-S.SNP.4:7564154 chr04:007564154 0 W/7564154-7564154 FN860-S Single Base Substitution T-A INTRON HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN860-S.SNP.4:7564155 chr04:007564155 0 W/7564155-7564155 FN860-S Single Base Substitution C-A INTRON HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN860-S.SNP.4:7564156 chr04:007564156 0 W/7564156-7564156 FN860-S Single Base Substitution T-A INTRON HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN360-S.SNP.4:7564461 chr04:007564461 0 W/7564461-7564461 FN360-S Single Base Substitution T-C INTRON HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2795-S.SNP.4:7565470 chr04:007565470 0 W/7565470-7565470 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.998929;DP=4288;DP4=1964,2086,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233209;MQB=3.86819e-12;MQSB=0.731404;RPB=0.997802;SGB=20.5152;VDB=0.875583;EFF=INTRON(MODIFIER||||928|LOC_Os04g13550|protein_coding|CODING|LOC_Os04g13550.1|1|1) FN784-S.SNP.4:7571041 chr04:007571041 0 W/7571041-7571041 FN784-S Single Base Substitution G-A INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3909-S.SNP.4:7574878 chr04:007574878 0 W/7574878-7574878 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.995005;DP=2682;DP4=1226,1340,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.33291e-10;MQSB=0.992654;RPB=0.579771;SGB=44.1818;VDB=0.0292965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.4:7579217 chr04:007579217 0 W/7579217-7579217 FN1506-S Single Base Substitution G-T INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3419-S.SNP.4:7579332 chr04:007579332 0 W/7579332-7579332 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.998378;DP=2655;DP4=1364,1179,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.89439e-08;MQSB=0.99981;RPB=0.953772;SGB=62.3078;VDB=0.959383;EFF=INTRON(MODIFIER||||515|LOC_Os04g13560|protein_coding|CODING|LOC_Os04g13560.1|1|1) FN1730-S.SNP.4:7579943 chr04:007579943 0 W/7579943-7579943 FN1730-S SNP T -> G AC=1;AN=188;BQB=0.675715;DP=2868;DP4=1253,1569,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.38898e-09;MQSB=0.963883;RPB=0.426936;SGB=8.62479;VDB=0.509994;EFF=INTRON(MODIFIER||||515|LOC_Os04g13560|protein_coding|CODING|LOC_Os04g13560.1|1|1) FN-235.SNP.4:7588897 chr04:007588897 0 W/7588897-7588897 FN-235 Single Base Substitution C-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2125-S.SNP.4:7592570 chr04:007592570 0 W/7592570-7592570 FN2125-S SNP C -> A AC=2;AN=168;BQB=0.00139451;DP=2921;DP4=1441,1412,22,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.42572e-20;MQSB=0.91954;RPB=0.556147;SGB=85.386;VDB=0.946243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.4:7596475 chr04:007596475 0 W/7596475-7596475 FN2491 SNP G -> A AC=1;AN=200;BQB=0.890593;DP=5153;DP4=2175,2662,28,18;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.409082;MQB=0.101976;MQSB=0;RPB=0.957711;SGB=-906.968;VDB=0.00307763;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L745|839|LOC_Os04g13600|protein_coding|CODING|LOC_Os04g13600.1|7|1) FN482-S.SNP.4:7599637 chr04:007599637 0 W/7599637-7599637 FN482-S Single Base Substitution T-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN3294-S.SNP.4:7600097 chr04:007600097 0 W/7600097-7600097 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.794283;DP=3942;DP4=1223,2411,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0753425;MQB=0.00309065;MQSB=7.52095e-06;RPB=0.266771;SGB=33.3622;VDB=0.387786;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.4:7606734 chr04:007606734 0 W/7606734-7606734 FN1430-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g13630 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN912-S.SNP.4:7606734 chr04:007606734 0 W/7606734-7606734 FN912-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g13630 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN859-S.SNP.4:7612793 chr04:007612793 0 W/7612793-7612793 FN859-S Single Base Substitution C-A INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2625-S.SNP.4:7621401 chr04:007621401 0 W/7621401-7621401 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.542398;DP=4852;DP4=2331,2319,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49716e-09;MQSB=0.666588;RPB=0.855129;SGB=47.7211;VDB=0.929102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.4:7623364 chr04:007623364 0 W/7623364-7623364 FN1064-S Single Base Substitution A-G INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2467.SNP.4:7630870 chr04:007630870 0 W/7630870-7630870 FN2467 SNP G -> A AC=1;AN=200;BQB=0.999691;DP=4149;DP4=2050,1889,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89864e-10;MQSB=0.0371293;RPB=0.864108;SGB=95.7111;VDB=0.707516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V349I|396|LOC_Os04g13670|protein_coding|CODING|LOC_Os04g13670.1|1|1) FN917-S.SNP.4:7654368 chr04:007654368 0 W/7654368-7654368 FN917-S Single Base Substitution G-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3861-S.SNP.4:7666972 chr04:007666972 0 W/7666972-7666972 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.998583;DP=2393;DP4=1072,1203,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00167154;MQB=3.30317e-07;MQSB=0.991306;RPB=0.962129;SGB=34.0735;VDB=0.0535263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G724R|861|LOC_Os04g13740|protein_coding|CODING|LOC_Os04g13740.1|2|1) FN2235-S.SNP.4:7670562 chr04:007670562 0 W/7670562-7670562 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.692244;DP=4836;DP4=2422,2117,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18026e-11;MQSB=0.980517;RPB=0.260433;SGB=13.4344;VDB=0.705155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H314Y|719|LOC_Os04g13750|protein_coding|CODING|LOC_Os04g13750.1|2|1) W279-4-1.SNP.4:7672097 chr04:007672097 0 W/7672097-7672097 W279-4-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN2274-S.SNP.4:7676544 chr04:007676544 0 W/7676544-7676544 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.0906717;DP=4422;DP4=2045,1955,19,21;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00949796;MQB=0.00858048;MQSB=0.225136;RPB=0.996786;SGB=176.604;VDB=0.733989;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.4:7683409 chr04:007683409 0 W/7683409-7683409 FN395-S Single Base Substitution C-T INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3476-S.SNP.4:7685275 chr04:007685275 0 W/7685275-7685275 FN3476-S SNP T -> G AC=1;AN=184;BQB=0.974492;DP=2478;DP4=1151,1194,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13966e-08;MQSB=0.970338;RPB=0.987454;SGB=35.7479;VDB=0.386524;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.4:7685325 chr04:007685325 0 W/7685325-7685325 FN3821-S SNP T -> C AC=1;AN=190;BQB=0.833641;DP=2566;DP4=1148,1208,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.58415e-08;MQSB=0.711503;RPB=0.921393;SGB=2.55724;VDB=0.107093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.4:7689981 chr04:007689981 0 W/7689981-7689981 FN2188-S SNP T -> C AC=1;AN=190;BQB=0.298484;DP=4859;DP4=2144,2132,21,21;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0253139;MQB=0.0774345;MQSB=2.15512e-08;RPB=0.998887;SGB=-0.482811;VDB=0.045888;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.4:7690905 chr04:007690905 0 W/7690905-7690905 FN1027-S Single Base Substitution T-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN-216.SNP.4:7691024 chr04:007691024 0 W/7691024-7691024 FN-216 Single Base Substitution G-C INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN1614-S.SNP.4:7694307 chr04:007694307 0 W/7694307-7694307 FN1614-S Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-100.SNP.4:7694364 chr04:007694364 0 W/7694364-7694364 FN-100 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g13790 retrotransposon, putative, centromere-specific, expressed SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. 707-5.SNP.4:7699075 chr04:007699075 0 W/7699075-7699075 707-5 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os04g13800 retrotransposon protein, putative, unclassified, expressed SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. FN4087-S.SNP.4:7704066 chr04:007704066 0 W/7704066-7704066 FN4087-S SNP C -> G AC=2;AN=182;BQB=0.539717;DP=2910;DP4=1363,1500,15,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000343643;MQB=1.04284e-10;MQSB=0.00124411;RPB=0.763966;SGB=40.7201;VDB=0.999019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Gct|P271A|620|LOC_Os04g13810|protein_coding|CODING|LOC_Os04g13810.1|2|1) FN622-S.SNP.4:7705877 chr04:007705877 0 W/7705877-7705877 FN622-S Single Base Substitution A-G INTRON HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN1618-S.SNP.4:7707189 chr04:007707189 0 W/7707189-7707189 FN1618-S Single Base Substitution G-A INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN4158-S.SNP.4:7710075 chr04:007710075 0 W/7710075-7710075 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.982889;DP=2776;DP4=1509,1183,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0644813;MQB=0.00764519;MQSB=0.000135278;RPB=0.985423;SGB=38.987;VDB=0.456924;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I1208F|1785|LOC_Os04g13820|protein_coding|CODING|LOC_Os04g13820.1|3|1) FN1697-S.SNP.4:7710204 chr04:007710204 0 W/7710204-7710204 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.735622;DP=2732;DP4=1364,1328,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.121889;MQB=0.660172;MQSB=0;RPB=0.805072;SGB=11.7114;VDB=0.841034;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1165M|1785|LOC_Os04g13820|protein_coding|CODING|LOC_Os04g13820.1|3|1) FN1501-S.SNP.4:7713825 chr04:007713825 0 W/7713825-7713825 FN1501-S Single Base Substitution G-A INTRON Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-144.SNP.4:7719000 chr04:007719000 0 W/7719000-7719000 FN-144 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2192-S.SNP.4:7719942 chr04:007719942 0 W/7719942-7719942 FN2192-S SNP G -> C AC=1;AN=190;BQB=0.343452;DP=5421;DP4=2453,2639,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.074525;MQB=0.906287;MQSB=3.83769e-16;RPB=0.284612;SGB=61.9679;VDB=0.602506;EFF=INTRON(MODIFIER||||399|LOC_Os04g13840|protein_coding|CODING|LOC_Os04g13840.1|2|1) FN701-S.SNP.4:7721802 chr04:007721802 0 W/7721802-7721802 FN701-S Single Base Substitution C-T INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN440-S.SNP.4:7725351 chr04:007725351 0 W/7725351-7725351 FN440-S Single Base Substitution C-T INTRON HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2142-S.SNP.4:7730717 chr04:007730717 0 W/7730717-7730717 FN2142-S SNP T -> C AC=1;AN=168;BQB=0.923193;DP=3906;DP4=1814,2036,11,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00204813;MQB=9.27213e-12;MQSB=0.864219;RPB=0.750881;SGB=-11.0644;VDB=0.0414641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y521H|667|LOC_Os04g13860|protein_coding|CODING|LOC_Os04g13860.1|6|1) FN628-S.SNP.4:7732330 chr04:007732330 0 W/7732330-7732330 FN628-S Single Base Substitution A-T INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2195-S.SNP.4:7735679 chr04:007735679 0 W/7735679-7735679 FN2195-S SNP G -> T AC=2;AN=190;BQB=0.682754;DP=4448;DP4=2359,1791,18,10;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.127923;MQB=0.280291;MQSB=0;RPB=0.99631;SGB=24.3115;VDB=0.899739;EFF=INTRON(MODIFIER||||375|LOC_Os04g13870|protein_coding|CODING|LOC_Os04g13870.1|1|1) FN3484-S.SNP.4:7736242 chr04:007736242 0 W/7736242-7736242 FN3484-S SNP T -> C AC=1;AN=184;BQB=0.88114;DP=3922;DP4=1927,1800,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0576237;MQB=0.999978;MQSB=7.99708e-11;RPB=0.996142;SGB=-14.714;VDB=0.269298;EFF=INTRON(MODIFIER||||375|LOC_Os04g13870|protein_coding|CODING|LOC_Os04g13870.1|1|1) FN1618-S.SNP.4:7736339 chr04:007736339 0 W/7736339-7736339 FN1618-S Single Base Substitution G-A INTRON HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2094-S.SNP.4:7745036 chr04:007745036 0 W/7745036-7745036 FN2094-S SNP A -> T AC=1;AN=168;BQB=0.284484;DP=2784;DP4=1324,1400,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0380747;MQB=0.369636;MQSB=0.0255331;RPB=0.344386;SGB=-182.327;VDB=0.311975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R62W|644|LOC_Os04g13880|protein_coding|CODING|LOC_Os04g13880.1|2|1) FN3385-S.SNP.4:7751332 chr04:007751332 0 W/7751332-7751332 FN3385-S SNP C -> G AC=1;AN=184;BQB=0.951111;DP=4123;DP4=1725,2262,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.498666;MQB=0.415421;MQSB=0;RPB=0.454502;SGB=60.4004;VDB=0.639752;EFF=INTRON(MODIFIER||||521|LOC_Os04g13890|protein_coding|CODING|LOC_Os04g13890.1|3|1) FN3857-S.SNP.4:7758347 chr04:007758347 0 W/7758347-7758347 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.171742;DP=2671;DP4=1488,1048,15,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.14091e-10;MQSB=0.78491;RPB=0.973311;SGB=13.0417;VDB=0.271576;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.4:7758898 chr04:007758898 0 W/7758898-7758898 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.331693;DP=3102;DP4=1320,1695,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000225016;MQSB=0.0128484;RPB=0.729989;SGB=35.4339;VDB=0.740475;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.4:7760266 chr04:007760266 0 W/7760266-7760266 FN419-S Single Base Substitution T-A INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2473.SNP.4:7762570 chr04:007762570 0 W/7762570-7762570 FN2473 SNP C -> T AC=2;AN=200;BQB=0.89115;DP=4577;DP4=2148,2107,22,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56341e-21;MQSB=0.816055;RPB=0.512253;SGB=0.808681;VDB=0.406616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E345K|741|LOC_Os04g13900|protein_coding|CODING|LOC_Os04g13900.1|1|1) FN2740-S.SNP.4:7762984 chr04:007762984 0 W/7762984-7762984 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.703795;DP=4690;DP4=2253,2199,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.17702e-07;MQSB=0.857335;RPB=0.27779;SGB=29.4541;VDB=0.314843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V207M|741|LOC_Os04g13900|protein_coding|CODING|LOC_Os04g13900.1|1|1) FN3867-S.SNP.4:7764160 chr04:007764160 0 W/7764160-7764160 FN3867-S SNP C -> T AC=1;AN=158;BQB=0.775764;DP=2562;DP4=1360,1104,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.0019516;MQB=8.74644e-05;MQSB=0.997725;RPB=0.836444;SGB=47.0672;VDB=0.391706;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.4:7764750 chr04:007764750 0 W/7764750-7764750 FN491-S Single Base Substitution A-G INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2583-S.SNP.4:7768785 chr04:007768785 0 W/7768785-7768785 FN2583-S SNP T -> C AC=1;AN=200;BQB=0.46905;DP=4729;DP4=2327,2217,20,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0133221;MQB=1.74056e-17;MQSB=0.524702;RPB=0.206614;SGB=164.789;VDB=0.164995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.4:7769152 chr04:007769152 0 W/7769152-7769152 FN3371-S SNP T -> C AC=1;AN=184;BQB=0.905236;DP=3222;DP4=1512,1574,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.208566;MQB=0.778008;MQSB=0.0854317;RPB=0.849488;SGB=39.2697;VDB=0.960365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.4:7770999 chr04:007770999 0 W/7770999-7770999 FN2421 SNP T -> A AC=1;AN=200;BQB=0.853684;DP=5305;DP4=2493,2318,19,11;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0682375;MQB=0.976186;MQSB=4.13622e-08;RPB=0.944975;SGB=63.3521;VDB=0.132877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y1718F|1825|LOC_Os04g13920|protein_coding|CODING|LOC_Os04g13920.1|3|1) FN-363.SNP.4:7774598 chr04:007774598 0 W/7774598-7774598 FN-363 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1318-S.SNP.4:7775542 chr04:007775542 0 W/7775542-7775542 FN1318-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g13920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2535-S.SNP.4:7780983 chr04:007780983 0 W/7780983-7780983 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.192351;DP=4202;DP4=2234,1664,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.1604;MQB=0.893496;MQSB=0;RPB=0.986427;SGB=16.3688;VDB=0.534093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.4:7781153 chr04:007781153 0 W/7781153-7781153 FN2532-S SNP G -> T AC=2;AN=198;BQB=0.51032;DP=3695;DP4=1901,1516,30,12;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00135318;MQB=2.09688e-15;MQSB=0.214541;RPB=0.445784;SGB=-92.1379;VDB=0.882127;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E26D|1639|LOC_Os04g13930|protein_coding|CODING|LOC_Os04g13930.1|1|1) FN712-S.SNP.4:7781595 chr04:007781595 0 W/7781595-7781595 FN712-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g13930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN672-S.SNP.4:7781989 chr04:007781989 0 W/7781989-7781989 FN672-S Single Base Substitution T-C INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN620-S.SNP.4:7782454 chr04:007782454 0 W/7782454-7782454 FN620-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g13930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1724-S.SNP.4:7784051 chr04:007784051 0 W/7784051-7784051 FN1724-S SNP C -> T AC=2;AN=188;BQB=0.358756;DP=2543;DP4=1291,1202,11,18;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.0224145;MQB=2.94347e-08;MQSB=0.719373;RPB=0.621738;SGB=92.677;VDB=0.354413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S854F|1639|LOC_Os04g13930|protein_coding|CODING|LOC_Os04g13930.1|3|1) FN3496-S.SNP.4:7785068 chr04:007785068 0 W/7785068-7785068 FN3496-S SNP C -> A AC=1;AN=188;BQB=0.821587;DP=2921;DP4=1354,1514,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0345772;MQB=0.340245;MQSB=0.0112;RPB=0.630716;SGB=53.5223;VDB=0.0839332;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A1193D|1639|LOC_Os04g13930|protein_coding|CODING|LOC_Os04g13930.1|3|1) FN1151-S.SNP.4:7788405 chr04:007788405 0 W/7788405-7788405 FN1151-S Single Base Substitution G-A INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2271-S.SNP.4:7793700 chr04:007793700 0 W/7793700-7793700 FN2271-S SNP G -> A AC=2;AN=190;BQB=0.262116;DP=5352;DP4=2697,2286,23,23;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0130792;MQB=8.40325e-14;MQSB=0.000160085;RPB=0.817349;SGB=203.927;VDB=0.889209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.4:7794476 chr04:007794476 0 W/7794476-7794476 FN1509-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g13950 retrotransposon protein, putative, unclassified, expressed SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3298-S.SNP.4:7795480 chr04:007795480 0 W/7795480-7795480 FN3298-S SNP C -> T AC=2;AN=184;BQB=0.981218;DP=3286;DP4=1537,1542,92,12;HOB=0.0215028;ICB=0.494625;MQ=26;MQ0F=0.174985;MQB=5.50852e-18;MQSB=0;RPB=0.00135377;SGB=-1637.05;VDB=5.23765e-23;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.4:7800916 chr04:007800916 0 W/7800916-7800916 FN1463-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN966-S.SNP.4:7804999 chr04:007804999 0 W/7804999-7804999 FN966-S Single Base Substitution C-T INTERGENIC HET SNo: 870, Mutant_ID: FN966-S, Generation: M2, Mutations: 8, Genes: 2, Seed availability: Yes. FN618-S.SNP.4:7808855 chr04:007808855 0 W/7808855-7808855 FN618-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g13970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1216-S.SNP.4:7809505 chr04:007809505 0 W/7809505-7809505 FN1216-S Single Base Substitution A-G INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN2702-S.SNP.4:7810699 chr04:007810699 0 W/7810699-7810699 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.392193;DP=4853;DP4=2321,2310,3,5;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0939625;MQB=0.999965;MQSB=0;RPB=0.558055;SGB=31.2392;VDB=0.521411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.4:7834450 chr04:007834450 0 W/7834450-7834450 FN3928-S SNP C -> T AC=1;AN=158;BQB=0.902496;DP=2580;DP4=1175,1271,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.086e-07;MQSB=0.855118;RPB=0.506377;SGB=16.7104;VDB=0.990154;EFF=INTRON(MODIFIER||||338|LOC_Os04g14040|protein_coding|CODING|LOC_Os04g14040.1|1|1) FN912-S.SNP.4:7835684 chr04:007835684 0 W/7835684-7835684 FN912-S Single Base Substitution G-A INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN-69.SNP.4:7838059 chr04:007838059 0 W/7838059-7838059 FN-69 Single Base Substitution T-C INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2462.SNP.4:7839501 chr04:007839501 0 W/7839501-7839501 FN2462 SNP C -> T AC=1;AN=200;BQB=0.758209;DP=4672;DP4=2485,1940,12,14;HOB=5e-05;ICB=0.0001005;MQ=13;MQ0F=0.525685;MQB=0.560318;MQSB=0;RPB=0.670506;SGB=83.5316;VDB=0.38414;EFF=INTRON(MODIFIER||||470|LOC_Os04g14050|protein_coding|CODING|LOC_Os04g14050.1|1|1) FN3494-S.SNP.4:7839825 chr04:007839825 0 W/7839825-7839825 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.870351;DP=4995;DP4=3206,1612,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=19;MQ0F=0.326927;MQB=0.00535638;MQSB=0.000469633;RPB=0.494714;SGB=80.3949;VDB=0.816436;EFF=INTRON(MODIFIER||||470|LOC_Os04g14050|protein_coding|CODING|LOC_Os04g14050.1|1|1) FN4255-S.SNP.4:7845535 chr04:007845535 0 W/7845535-7845535 FN4255-S SNP G -> A AC=1;AN=170;BQB=0.940868;DP=2386;DP4=1326,958,10,11;HOB=6.92042e-05;ICB=0.000139222;MQ=25;MQ0F=0.172255;MQB=0.0465093;MQSB=0;RPB=0.973361;SGB=62.4192;VDB=0.0209562;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.4:7845583 chr04:007845583 0 W/7845583-7845583 FN862-S Single Base Substitution A-G INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN862-S.SNP.4:7845584 chr04:007845584 0 W/7845584-7845584 FN862-S Single Base Substitution T-A INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN862-S.SNP.4:7845585 chr04:007845585 0 W/7845585-7845585 FN862-S Single Base Substitution T-A INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN-263.SNP.4:7848769 chr04:007848769 0 W/7848769-7848769 FN-263 Single Base Substitution C-T INTERGENIC HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN1382-S.SNP.4:7857888 chr04:007857888 0 W/7857888-7857888 FN1382-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2083-S.SNP.4:7867609 chr04:007867609 0 W/7867609-7867609 FN2083-S SNP C -> T AC=2;AN=168;BQB=0.789814;DP=2508;DP4=1064,1375,12,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.73922e-16;MQSB=0.957198;RPB=0.727299;SGB=-8.04863;VDB=0.620185;EFF=INTRON(MODIFIER||||84|LOC_Os04g14100|protein_coding|CODING|LOC_Os04g14100.1|1|1) FN2180-S.SNP.4:7867609 chr04:007867609 0 W/7867609-7867609 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.862016;DP=3482;DP4=1173,2077,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000287191;MQB=8.09823e-10;MQSB=0.0464241;RPB=0.997475;SGB=68.0854;VDB=0.836686;EFF=INTRON(MODIFIER||||84|LOC_Os04g14100|protein_coding|CODING|LOC_Os04g14100.1|1|1) FN3993-S.SNP.4:7868417 chr04:007868417 0 W/7868417-7868417 FN3993-S SNP C -> T AC=2;AN=168;BQB=0.996812;DP=2552;DP4=1277,1162,18,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.49828e-17;MQSB=0.999051;RPB=0.736672;SGB=86.2102;VDB=0.333921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.4:7874862 chr04:007874862 0 W/7874862-7874862 FN3978-S SNP T -> A AC=2;AN=168;BQB=0.887107;DP=2684;DP4=1208,1274,15,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.44945e-17;MQSB=0.77792;RPB=0.914261;SGB=27.0838;VDB=0.342678;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.4:7884879 chr04:007884879 0 W/7884879-7884879 FN1744-S SNP T -> C AC=2;AN=188;BQB=0.339324;DP=3482;DP4=1653,1726,21,23;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0376221;MQB=0.000244189;MQSB=0.00495581;RPB=0.93776;SGB=-96.8634;VDB=0.898363;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.4:7885054 chr04:007885054 0 W/7885054-7885054 FN4203-S SNP T -> C AC=2;AN=170;BQB=0.95003;DP=2305;DP4=1192,1023,18,19;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0286334;MQB=0.022042;MQSB=0.036208;RPB=0.814808;SGB=158.938;VDB=0.134991;EFF=INTERGENIC(MODIFIER||||||||||1) FN593-S.SNP.4:7887735 chr04:007887735 0 W/7887735-7887735 FN593-S Single Base Substitution C-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3529-S.SNP.4:7895183 chr04:007895183 0 W/7895183-7895183 FN3529-S SNP G -> A AC=1;AN=188;BQB=0.835318;DP=2673;DP4=1329,1296,3,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00645125;MQSB=0.612863;RPB=0.619135;SGB=21.722;VDB=0.700968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L380F|884|LOC_Os04g14130|protein_coding|CODING|LOC_Os04g14130.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L380F|884|LOC_Os04g14130|protein_coding|CODING|LOC_Os04g14130.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L380F|884|LOC_Os04g14130|protein_coding|CODING|LOC_Os04g14130.3|2|1) FN3699-S.SNP.4:7904018 chr04:007904018 0 W/7904018-7904018 FN3699-S SNP T -> G AC=1;AN=190;BQB=0.873509;DP=3013;DP4=1416,1504,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07656e-09;MQSB=0.822991;RPB=0.692014;SGB=62.7569;VDB=0.854991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.4:7922684 chr04:007922684 0 W/7922684-7922684 FN2559-S SNP T -> C AC=1;AN=198;BQB=0.974229;DP=8390;DP4=3653,4217,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.00011919;MQB=0.576308;MQSB=0.482066;RPB=0.693142;SGB=36.5539;VDB=0.471997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.4:7927753 chr04:007927753 0 W/7927753-7927753 FN1532-S Single Base Substitution T-A INTERGENIC Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN911-S.SNP.4:7936760 chr04:007936760 0 W/7936760-7936760 FN911-S Single Base Substitution A-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN897-S.SNP.4:7938684 chr04:007938684 0 W/7938684-7938684 FN897-S Single Base Substitution T-A INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN-94.SNP.4:7950892 chr04:007950892 0 W/7950892-7950892 FN-94 Single Base Substitution A-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2478.SNP.4:7958466 chr04:007958466 0 W/7958466-7958466 FN2478 SNP A -> T AC=2;AN=200;BQB=0.780782;DP=4667;DP4=2303,2119,20,21;HOB=0.0198;ICB=0.495051;MQ=33;MQ0F=0.112492;MQB=0.6919;MQSB=0;RPB=0.998304;SGB=137.609;VDB=0.0389758;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.4:7960571 chr04:007960571 0 W/7960571-7960571 FN4139-S SNP G -> A AC=1;AN=170;BQB=0.885037;DP=1952;DP4=877,999,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=8.58672e-07;MQSB=0.999746;RPB=0.127877;SGB=41.7633;VDB=0.731125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.4:7977785 chr04:007977785 0 W/7977785-7977785 FN2181-S SNP T -> G AC=1;AN=190;BQB=0.851765;DP=4986;DP4=2394,2293,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200562;MQB=7.02342e-09;MQSB=0.100661;RPB=0.102811;SGB=62.7569;VDB=0.848919;EFF=INTRON(MODIFIER||||701|LOC_Os04g14220|protein_coding|CODING|LOC_Os04g14220.1|1|1),INTRON(MODIFIER||||701|LOC_Os04g14220|protein_coding|CODING|LOC_Os04g14220.2|1|1) FN2350.SNP.4:7978970 chr04:007978970 0 W/7978970-7978970 FN2350 SNP A -> G AC=1;AN=192;BQB=0.938575;DP=4605;DP4=2024,2149,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.11967e-12;MQSB=0.607785;RPB=0.991986;SGB=16.7409;VDB=0.880894;EFF=INTRON(MODIFIER||||701|LOC_Os04g14220|protein_coding|CODING|LOC_Os04g14220.1|1|1),INTRON(MODIFIER||||701|LOC_Os04g14220|protein_coding|CODING|LOC_Os04g14220.2|1|1) FN2537-S.SNP.4:7993428 chr04:007993428 0 W/7993428-7993428 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.0898535;DP=5187;DP4=2282,2570,12,22;HOB=5.10152e-05;ICB=0.000102546;MQ=19;MQ0F=0.322152;MQB=0.0638654;MQSB=0;RPB=0.429183;SGB=-351.029;VDB=0.0308407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.4:7994026 chr04:007994026 0 W/7994026-7994026 FN2500 SNP A -> G AC=1;AN=200;BQB=0.0920561;DP=4242;DP4=1850,1990,5,7;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0563414;MQB=0.164461;MQSB=0.0136555;RPB=0.646679;SGB=49.6594;VDB=0.203074;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.4:8003627 chr04:008003627 0 W/8003627-8003627 FN-212 Single Base Substitution A-T INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1648-S.SNP.4:8004946 chr04:008004946 0 W/8004946-8004946 FN1648-S Single Base Substitution C-G INTERGENIC HET SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN2530-S.SNP.4:8008659 chr04:008008659 0 W/8008659-8008659 FN2530-S SNP G -> T AC=1;AN=198;BQB=0.99208;DP=3972;DP4=2049,1672,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.93329e-10;MQSB=0.932792;RPB=0.831394;SGB=86.3098;VDB=0.614437;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.4:8016549 chr04:008016549 0 W/8016549-8016549 FN413-S Single Base Substitution G-T INTRON HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2781-S.SNP.4:8019300 chr04:008019300 0 W/8019300-8019300 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.625921;DP=3510;DP4=1494,1789,15,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.90813e-10;MQSB=0.415535;RPB=0.978029;SGB=77.1196;VDB=0.953039;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.4:8025600 chr04:008025600 0 W/8025600-8025600 FN2614-S SNP C -> T AC=2;AN=198;BQB=0.540813;DP=4049;DP4=1850,1958,12,16;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0437145;MQB=0.525402;MQSB=5.34195e-08;RPB=0.0621382;SGB=90.4807;VDB=0.452239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.4:8026535 chr04:008026535 0 W/8026535-8026535 FN3295-S SNP T -> C AC=1;AN=184;BQB=0.954201;DP=4725;DP4=2697,1727,19,1;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00910053;MQB=0.000192039;MQSB=6.75294e-39;RPB=0.586821;SGB=-13.1487;VDB=0.0173863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.4:8026704 chr04:008026704 0 W/8026704-8026704 FN1288-S Single Base Substitution G-C INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN4260-S.SNP.4:8028304 chr04:008028304 0 W/8028304-8028304 FN4260-S SNP G -> A AC=2;AN=170;BQB=0.900734;DP=2750;DP4=1488,1143,30,15;HOB=0.0232526;ICB=0.494188;MQ=32;MQ0F=0.117818;MQB=0.796221;MQSB=0.12076;RPB=0.44996;SGB=194.48;VDB=0.507188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.4:8028897 chr04:008028897 0 W/8028897-8028897 FN-375 Single Base Substitution G-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-411.SNP.4:8028897 chr04:008028897 0 W/8028897-8028897 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN571-S.SNP.4:8028897 chr04:008028897 0 W/8028897-8028897 FN571-S Single Base Substitution G-A INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN-176.SNP.4:8031254 chr04:008031254 0 W/8031254-8031254 FN-176 Single Base Substitution G-A INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN1339-S.SNP.4:8032768 chr04:008032768 0 W/8032768-8032768 FN1339-S Single Base Substitution T-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3440-S.SNP.4:8032979 chr04:008032979 0 W/8032979-8032979 FN3440-S SNP C -> G AC=1;AN=184;BQB=0.901301;DP=2604;DP4=1211,1308,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.78338e-09;MQSB=0.999;RPB=0.360231;SGB=46.3132;VDB=0.0609362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.4:8035996 chr04:008035996 0 W/8035996-8035996 FN1529-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1529-S.SNP.4:8035997 chr04:008035997 0 W/8035997-8035997 FN1529-S Single Base Substitution A-T STOP_GAINED Homo LOC_Os04g14340 retrotransposon protein, putative, unclassified, expressed SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1529-S.SNP.4:8035998 chr04:008035998 0 W/8035998-8035998 FN1529-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os04g14340 retrotransposon protein, putative, unclassified, expressed SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN343-S.SNP.4:8041936 chr04:008041936 0 W/8041936-8041936 FN343-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g14360 expressed protein SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN484-S.SNP.4:8044599 chr04:008044599 0 W/8044599-8044599 FN484-S Single Base Substitution T-A INTRON HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2631-S.SNP.4:8047015 chr04:008047015 0 W/8047015-8047015 FN2631-S SNP A -> G AC=1;AN=200;BQB=0.976067;DP=5266;DP4=2953,2005,20,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33122e-16;MQSB=0.956434;RPB=0.835299;SGB=-4.63785;VDB=0.169954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.4:8051478 chr04:008051478 0 W/8051478-8051478 FN3964-S SNP A -> T AC=1;AN=168;BQB=0.988982;DP=2477;DP4=1178,1209,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15127e-09;MQSB=0.557434;RPB=0.880618;SGB=27.0464;VDB=0.477201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.4:8051479 chr04:008051479 0 W/8051479-8051479 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.876497;DP=2478;DP4=1173,1168,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.45835e-10;MQSB=0.53696;RPB=0.957817;SGB=45.0404;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.4:8054483 chr04:008054483 0 W/8054483-8054483 FN-154 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3998-S.SNP.4:8058294 chr04:008058294 0 W/8058294-8058294 FN3998-S SNP A -> G AC=2;AN=168;BQB=0.998229;DP=2642;DP4=1253,1306,10,10;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00567752;MQB=2.42853e-09;MQSB=0.92043;RPB=0.943581;SGB=58.7637;VDB=0.37372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.4:8058534 chr04:008058534 0 W/8058534-8058534 FN3902-S SNP A -> G AC=1;AN=158;BQB=0.987278;DP=2794;DP4=1293,1372,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00322119;MQB=1.38494e-07;MQSB=0.0318394;RPB=0.999922;SGB=44.1818;VDB=0.641471;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.4:8059781 chr04:008059781 0 W/8059781-8059781 FN1195-S Single Base Substitution C-G INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN4272-S.SNP.4:8062226 chr04:008062226 0 W/8062226-8062226 FN4272-S SNP A -> G AC=1;AN=170;BQB=0.991162;DP=2450;DP4=1142,1238,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.29387e-08;MQSB=0.899864;RPB=0.904544;SGB=47.8722;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.4:8067064 chr04:008067064 0 W/8067064-8067064 FN2471 SNP A -> T AC=1;AN=200;BQB=0.999424;DP=4640;DP4=2335,2095,13,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.00701e-20;MQSB=0.993504;RPB=0.31752;SGB=160.183;VDB=0.5996;EFF=INTRON(MODIFIER||||451|LOC_Os04g14410|protein_coding|CODING|LOC_Os04g14410.1|3|1) FN3864-S.SNP.4:8081563 chr04:008081563 0 W/8081563-8081563 FN3864-S SNP G -> A AC=1;AN=158;BQB=0.618244;DP=2398;DP4=1168,1143,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.04729e-06;MQSB=0.976397;RPB=0.959453;SGB=68.9144;VDB=0.728046;EFF=INTRON(MODIFIER||||636|LOC_Os04g14430|protein_coding|CODING|LOC_Os04g14430.1|2|1) FN1124-S.SNP.4:8089257 chr04:008089257 0 W/8089257-8089257 FN1124-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1367-S.SNP.4:8096732 chr04:008096732 0 W/8096732-8096732 FN1367-S Single Base Substitution C-T INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN-76.SNP.4:8097595 chr04:008097595 0 W/8097595-8097595 FN-76 Single Base Substitution C-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-179.SNP.4:8098866 chr04:008098866 0 W/8098866-8098866 FN-179 Single Base Substitution T-A STOP_GAINED HOMO LOC_Os04g14470 retrotransposon protein, putative, unclassified SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2116-S.SNP.4:8100520 chr04:008100520 0 W/8100520-8100520 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.965027;DP=3870;DP4=1903,1931,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.72117e-09;MQSB=0.992911;RPB=0.237628;SGB=27.0464;VDB=0.546716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.4:8103030 chr04:008103030 0 W/8103030-8103030 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.947883;DP=4241;DP4=1877,2012,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000471587;MQB=5.66043e-07;MQSB=0.754939;RPB=0.845401;SGB=44.0907;VDB=0.0542344;EFF=INTRON(MODIFIER||||577|LOC_Os04g14490|protein_coding|CODING|LOC_Os04g14490.1|2|1) FN2217-S.SNP.4:8103097 chr04:008103097 0 W/8103097-8103097 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.940735;DP=4466;DP4=1860,2337,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00479077;MQSB=0.00672079;RPB=0.0553564;SGB=-18.2068;VDB=0.15979;EFF=INTRON(MODIFIER||||577|LOC_Os04g14490|protein_coding|CODING|LOC_Os04g14490.1|2|1) FN3309-S.SNP.4:8103381 chr04:008103381 0 W/8103381-8103381 FN3309-S SNP T -> G AC=1;AN=184;BQB=0.87761;DP=2975;DP4=1168,1716,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93734e-10;MQSB=0.999902;RPB=0.996072;SGB=49.835;VDB=0.84761;EFF=INTRON(MODIFIER||||577|LOC_Os04g14490|protein_coding|CODING|LOC_Os04g14490.1|2|1) FN1737-S.SNP.4:8104219 chr04:008104219 0 W/8104219-8104219 FN1737-S SNP C -> T AC=2;AN=188;BQB=0.899029;DP=2854;DP4=1454,1359,18,9;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00140154;MQB=2.37197e-07;MQSB=1.04555e-06;RPB=0.772078;SGB=85.5904;VDB=0.422173;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P132L|577|LOC_Os04g14490|protein_coding|CODING|LOC_Os04g14490.1|3|1) FN836-S.SNP.4:8106489 chr04:008106489 0 W/8106489-8106489 FN836-S Single Base Substitution C-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-338.SNP.4:8107537 chr04:008107537 0 W/8107537-8107537 FN-338 Single Base Substitution G-A INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN984-S.SNP.4:8113353 chr04:008113353 0 W/8113353-8113353 FN984-S Single Base Substitution C-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2449.SNP.4:8117772 chr04:008117772 0 W/8117772-8117772 FN2449 SNP G -> T AC=2;AN=200;BQB=0.897763;DP=4729;DP4=2313,2162,23,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.7624e-28;MQSB=0.999591;RPB=0.77117;SGB=6.25521;VDB=0.351406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A970E|974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.1|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A970E|974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.2|10|1) FN3487-S.SNP.4:8122680 chr04:008122680 0 W/8122680-8122680 FN3487-S SNP G -> A AC=2;AN=184;BQB=0.655756;DP=2658;DP4=1284,1285,13,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32469e-17;MQSB=0.756864;RPB=0.700078;SGB=109.705;VDB=0.189022;EFF=INTRON(MODIFIER||||974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.1|3|1),INTRON(MODIFIER||||974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.2|2|1) FN2448.SNP.4:8123376 chr04:008123376 0 W/8123376-8123376 FN2448 SNP G -> A AC=1;AN=200;BQB=0.255092;DP=4622;DP4=2260,2122,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216357;MQB=9.35171e-09;MQSB=0.759394;RPB=0.916384;SGB=34.6953;VDB=0.170229;EFF=INTRON(MODIFIER||||974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.1|3|1),INTRON(MODIFIER||||974|LOC_Os04g14510|protein_coding|CODING|LOC_Os04g14510.2|2|1) FN1618-S.SNP.4:8128495 chr04:008128495 0 W/8128495-8128495 FN1618-S Single Base Substitution C-T INTERGENIC Homo SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN400-S.SNP.4:8129166 chr04:008129166 0 W/8129166-8129166 FN400-S Single Base Substitution G-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN_949-1.SNP.4:8133883 chr04:008133883 0 W/8133883-8133883 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN-291.SNP.4:8136310 chr04:008136310 0 W/8136310-8136310 FN-291 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g14540 expressed protein SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN3306-S.SNP.4:8142517 chr04:008142517 0 W/8142517-8142517 FN3306-S SNP G -> A AC=2;AN=184;BQB=0.789999;DP=3336;DP4=1597,1618,17,16;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0302758;MQB=0.00206785;MQSB=0.999021;RPB=0.551576;SGB=106.184;VDB=0.965367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.4:8167326 chr04:008167326 0 W/8167326-8167326 FN2575-S SNP A -> C AC=1;AN=198;BQB=0.994045;DP=4337;DP4=1997,2052,27,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.62367e-29;MQSB=0.955063;RPB=0.961824;SGB=210.378;VDB=0.853871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L1150R|1343|LOC_Os04g14570|protein_coding|CODING|LOC_Os04g14570.1|2|1) FN3391-S.SNP.4:8167402 chr04:008167402 0 W/8167402-8167402 FN3391-S SNP C -> T AC=1;AN=184;BQB=0.334287;DP=2823;DP4=1179,1537,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27004e-07;MQSB=0.991451;RPB=0.975631;SGB=23.2751;VDB=0.592534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D1125N|1343|LOC_Os04g14570|protein_coding|CODING|LOC_Os04g14570.1|2|1) FN1427-S.SNP.4:8171740 chr04:008171740 0 W/8171740-8171740 FN1427-S Single Base Substitution A-T INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2591-S.SNP.4:8176096 chr04:008176096 0 W/8176096-8176096 FN2591-S SNP G -> A AC=1;AN=198;BQB=0.885891;DP=4294;DP4=1935,2143,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0027946;MQB=0.0957674;MQSB=0.000271157;RPB=0.998916;SGB=18.9639;VDB=0.850289;EFF=UTR_5_PRIME(MODIFIER||2198||1534|LOC_Os04g14580|protein_coding|CODING|LOC_Os04g14580.1|1|1) FN3732-S.SNP.4:8183854 chr04:008183854 0 W/8183854-8183854 FN3732-S SNP G -> A AC=1;AN=190;BQB=0.647974;DP=3169;DP4=1355,1702,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24298e-05;MQSB=0.953356;RPB=0.838366;SGB=39.6545;VDB=0.773413;EFF=INTRON(MODIFIER||||1534|LOC_Os04g14580|protein_coding|CODING|LOC_Os04g14580.1|14|1) FN3851-S.SNP.4:8183868 chr04:008183868 0 W/8183868-8183868 FN3851-S SNP G -> C AC=1;AN=158;BQB=0.713661;DP=3179;DP4=1460,1606,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.7649e-07;MQSB=0.986115;RPB=0.858221;SGB=60.1755;VDB=0.558862;EFF=INTRON(MODIFIER||||1534|LOC_Os04g14580|protein_coding|CODING|LOC_Os04g14580.1|14|1) FN1366-S.SNP.4:8184388 chr04:008184388 0 W/8184388-8184388 FN1366-S Single Base Substitution G-A INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN-363.SNP.4:8186027 chr04:008186027 0 W/8186027-8186027 FN-363 Single Base Substitution G-C INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN919-S.SNP.4:8188421 chr04:008188421 0 W/8188421-8188421 FN919-S Single Base Substitution T-C INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3886-S.SNP.4:8191162 chr04:008191162 0 W/8191162-8191162 FN3886-S SNP C -> G AC=1;AN=158;BQB=0.54167;DP=2602;DP4=1389,1097,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.63038e-06;MQSB=0.955992;RPB=0.903307;SGB=27.3346;VDB=0.769297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.4:8191727 chr04:008191727 0 W/8191727-8191727 FN2380 SNP C -> T AC=1;AN=192;BQB=0.897514;DP=5377;DP4=2659,2411,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.08132e-09;MQSB=0.854914;RPB=0.99877;SGB=5.79046;VDB=0.358529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A351T|467|LOC_Os04g14600|protein_coding|CODING|LOC_Os04g14600.1|3|1) FN3370-S.SNP.4:8191958 chr04:008191958 0 W/8191958-8191958 FN3370-S SNP T -> A AC=2;AN=184;BQB=0.97979;DP=4641;DP4=1933,2476,28,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.00436e-34;MQSB=0.911981;RPB=0.982106;SGB=-55.3588;VDB=0.552098;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K274*|467|LOC_Os04g14600|protein_coding|CODING|LOC_Os04g14600.1|3|1);LOF=(LOC_Os04g14600|LOC_Os04g14600|1|1.00);NMD=(LOC_Os04g14600|LOC_Os04g14600|1|1.00) FN891-S.SNP.4:8196296 chr04:008196296 0 W/8196296-8196296 FN891-S Single Base Substitution A-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN1116-S.SNP.4:8199829 chr04:008199829 0 W/8199829-8199829 FN1116-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g14620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN2683-S.SNP.4:8200486 chr04:008200486 0 W/8200486-8200486 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.925837;DP=6204;DP4=2870,3027,13,10;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.181979;MQB=0.996182;MQSB=1.62523e-18;RPB=0.876494;SGB=45.1159;VDB=0.0364268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G719R|1263|LOC_Os04g14620|protein_coding|CODING|LOC_Os04g14620.1|2|1) FN1760-S.SNP.4:8213725 chr04:008213725 0 W/8213725-8213725 FN1760-S SNP A -> G AC=2;AN=188;BQB=0.361673;DP=3843;DP4=1748,2038,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.41415e-17;MQSB=0.999324;RPB=0.994705;SGB=-46.0419;VDB=0.344665;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.4:8224758 chr04:008224758 0 W/8224758-8224758 FN620-S Single Base Substitution G-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN620-S.SNP.4:8224760 chr04:008224760 0 W/8224760-8224760 FN620-S Single Base Substitution A-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3893-S.SNP.4:8228849 chr04:008228849 0 W/8228849-8228849 FN3893-S SNP C -> T AC=2;AN=158;BQB=0.530048;DP=2176;DP4=922,1162,15,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.03578e-14;MQSB=0.995859;RPB=0.388063;SGB=130.087;VDB=0.911925;EFF=INTRON(MODIFIER||||601|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.1|7|1),INTRON(MODIFIER||||601|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.2|7|1),INTRON(MODIFIER||||563|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.3|7|1) FN3637-S.SNP.4:8233058 chr04:008233058 0 W/8233058-8233058 FN3637-S SNP G -> C AC=1;AN=190;BQB=0.965954;DP=2530;DP4=1248,1172,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67632e-07;MQSB=0.962025;RPB=0.56105;SGB=43.2083;VDB=0.520002;EFF=INTRON(MODIFIER||||601|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.2|1|1),INTRON(MODIFIER||||601|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.1|1|1),INTRON(MODIFIER||||563|LOC_Os04g14654|protein_coding|CODING|LOC_Os04g14654.3|1|1) FN2421.SNP.4:8239707 chr04:008239707 0 W/8239707-8239707 FN2421 SNP T -> C AC=1;AN=200;BQB=0.812161;DP=5130;DP4=2458,2357,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10975e-18;MQSB=0.993212;RPB=0.927745;SGB=94.3471;VDB=0.593587;EFF=INTRON(MODIFIER||||291|LOC_Os04g14680|protein_coding|CODING|LOC_Os04g14680.1|8|1) FN2312.SNP.4:8244012 chr04:008244012 0 W/8244012-8244012 FN2312 SNP A -> G AC=2;AN=192;BQB=0.786222;DP=5007;DP4=2458,2165,18,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00019972;MQB=2.13047e-21;MQSB=0.912668;RPB=0.938776;SGB=146.71;VDB=0.0093637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M490T|521|LOC_Os04g14690|protein_coding|CODING|LOC_Os04g14690.1|5|1) FN2665-S.SNP.4:8251075 chr04:008251075 0 W/8251075-8251075 FN2665-S SNP C -> T AC=2;AN=200;BQB=0.617561;DP=4778;DP4=2343,2107,32,25;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=6.21663e-30;MQSB=0.257834;RPB=0.951779;SGB=133.692;VDB=0.673339;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.4:8251318 chr04:008251318 0 W/8251318-8251318 FN1319-S Single Base Substitution C-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN860-S.SNP.4:8252398 chr04:008252398 0 W/8252398-8252398 FN860-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2102-S.SNP.4:8253409 chr04:008253409 0 W/8253409-8253409 FN2102-S SNP C -> T AC=1;AN=168;BQB=0.963073;DP=4018;DP4=1816,2162,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.0012444;MQB=1.21225e-05;MQSB=0.965622;RPB=0.721668;SGB=2.75988;VDB=0.0671243;EFF=INTRON(MODIFIER||||763|LOC_Os04g14700|protein_coding|CODING|LOC_Os04g14700.1|1|1) FN_814-7-1.SNP.4:8253526 chr04:008253526 0 W/8253526-8253526 FN_814-7-1 Single Base Substitution T-A Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN775-S.SNP.4:8257362 chr04:008257362 0 W/8257362-8257362 FN775-S Single Base Substitution A-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2430.SNP.4:8262082 chr04:008262082 0 W/8262082-8262082 FN2430 SNP G -> A AC=1;AN=200;BQB=0.548279;DP=5103;DP4=2171,2630,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17849e-08;MQSB=0.793755;RPB=0.0436865;SGB=-14.3206;VDB=0.572782;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.4:8265646 chr04:008265646 0 W/8265646-8265646 FN-353 Single Base Substitution C-T INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3917-S.SNP.4:8272711 chr04:008272711 0 W/8272711-8272711 FN3917-S SNP G -> C AC=1;AN=158;BQB=0.957134;DP=2917;DP4=1269,1575,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.24762e-05;MQSB=0.937475;RPB=0.846541;SGB=38.3284;VDB=0.0115453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.4:8274775 chr04:008274775 0 W/8274775-8274775 FN3596-S SNP C -> A AC=1;AN=188;BQB=0.977167;DP=3171;DP4=1792,1296,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.15553e-12;MQSB=0.707099;RPB=0.148522;SGB=67.8739;VDB=0.807885;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V136|151|LOC_Os04g14730|protein_coding|CODING|LOC_Os04g14730.1|1|1) FN2637-S.SNP.4:8276191 chr04:008276191 0 W/8276191-8276191 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.814518;DP=4916;DP4=2385,2258,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20882e-13;MQSB=0.348143;RPB=0.829569;SGB=83.5316;VDB=0.674539;EFF=INTRON(MODIFIER||||86|LOC_Os04g14740|protein_coding|CODING|LOC_Os04g14740.1|1|1) FN3558-S.SNP.4:8278449 chr04:008278449 0 W/8278449-8278449 FN3558-S SNP G -> A AC=1;AN=188;BQB=0.986456;DP=3468;DP4=2141,1259,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.56517e-15;MQSB=0.891943;RPB=0.930152;SGB=74.9605;VDB=0.09335;EFF=SPLICE_SITE_REGION(LOW||||116|LOC_Os04g14750|protein_coding|CODING|LOC_Os04g14750.1|2|1),INTRON(MODIFIER||||116|LOC_Os04g14750|protein_coding|CODING|LOC_Os04g14750.1|2|1) FN3404-S.SNP.4:8282399 chr04:008282399 0 W/8282399-8282399 FN3404-S SNP G -> T AC=1;AN=184;BQB=0.985065;DP=2797;DP4=1433,1282,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.3818e-07;MQSB=0.995831;RPB=0.79273;SGB=53.2642;VDB=0.510906;EFF=INTRON(MODIFIER||||236|LOC_Os04g14760|protein_coding|CODING|LOC_Os04g14760.1|4|1) FN3404-S.SNP.4:8282400 chr04:008282400 0 W/8282400-8282400 FN3404-S SNP A -> T AC=1;AN=184;BQB=0.810015;DP=2797;DP4=1422,1271,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33095e-08;MQSB=0.992045;RPB=0.833052;SGB=20.7533;VDB=0.353483;EFF=INTRON(MODIFIER||||236|LOC_Os04g14760|protein_coding|CODING|LOC_Os04g14760.1|4|1) FN-120.SNP.4:8285607 chr04:008285607 0 W/8285607-8285607 FN-120 Single Base Substitution A-G INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4021-S.SNP.4:8287646 chr04:008287646 0 W/8287646-8287646 FN4021-S SNP G -> A AC=1;AN=168;BQB=0.684336;DP=2739;DP4=1319,1324,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24009e-05;MQSB=0.966193;RPB=0.583312;SGB=19.7539;VDB=0.372047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R328Q|1790|LOC_Os04g14770|protein_coding|CODING|LOC_Os04g14770.1|1|1) FN2430.SNP.4:8292722 chr04:008292722 0 W/8292722-8292722 FN2430 SNP G -> A AC=2;AN=200;BQB=0.835376;DP=4598;DP4=2011,2139,32,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29233e-25;MQSB=0.140216;RPB=0.670152;SGB=177.266;VDB=0.0733482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.4:8295090 chr04:008295090 0 W/8295090-8295090 FN1023-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2455.SNP.4:8295134 chr04:008295134 0 W/8295134-8295134 FN2455 SNP C -> A AC=1;AN=200;BQB=0.938199;DP=4309;DP4=2294,1712,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.30455e-08;MQSB=0.857826;RPB=0.755764;SGB=43.8747;VDB=0.0234507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A169S|568|LOC_Os04g14780|protein_coding|CODING|LOC_Os04g14780.1|4|1) FN414-S.SNP.4:8298864 chr04:008298864 0 W/8298864-8298864 FN414-S Single Base Substitution C-T INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1744-S.SNP.4:8304933 chr04:008304933 0 W/8304933-8304933 FN1744-S SNP C -> A AC=1;AN=188;BQB=0.576293;DP=4119;DP4=2111,1971,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43305e-10;MQSB=0.989885;RPB=0.976518;SGB=-39.6481;VDB=0.924284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.4:8312027 chr04:008312027 0 W/8312027-8312027 FN3770-S SNP T -> C AC=2;AN=190;BQB=0.740564;DP=2706;DP4=1276,1322,8,2;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.00013142;MQSB=0.954556;RPB=0.284284;SGB=25.439;VDB=0.474122;EFF=INTRON(MODIFIER||||629|LOC_Os04g14790|protein_coding|CODING|LOC_Os04g14790.1|2|1) FN2151-S.SNP.4:8314915 chr04:008314915 0 W/8314915-8314915 FN2151-S SNP G -> T AC=1;AN=168;BQB=0.0632769;DP=4031;DP4=1926,2051,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.89513e-06;MQSB=0.997679;RPB=0.986593;SGB=-15.8033;VDB=0.39441;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.4:8316033 chr04:008316033 0 W/8316033-8316033 FN4201-S SNP T -> A AC=2;AN=170;BQB=0.545911;DP=2502;DP4=937,1364,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.00039968;MQB=7.54813e-10;MQSB=0.999495;RPB=0.709029;SGB=32.0972;VDB=0.583639;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.4:8316290 chr04:008316290 0 W/8316290-8316290 FN4065-S SNP C -> A AC=1;AN=168;BQB=0.977241;DP=2430;DP4=1126,1191,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.4087e-05;MQSB=0.905606;RPB=0.581934;SGB=21.0249;VDB=0.534866;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.4:8316476 chr04:008316476 0 W/8316476-8316476 FN_786-4-1 Single Base Substitution T-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN_786-4-1.SNP.4:8316477 chr04:008316477 0 W/8316477-8316477 FN_786-4-1 Single Base Substitution G-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN739-S.SNP.4:8323878 chr04:008323878 0 W/8323878-8323878 FN739-S Single Base Substitution T-C INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-50.SNP.4:8326043 chr04:008326043 0 W/8326043-8326043 FN-50 Single Base Substitution G-A INTERGENIC Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN1639-S.SNP.4:8335874 chr04:008335874 0 W/8335874-8335874 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN543-S.SNP.4:8338428 chr04:008338428 0 W/8338428-8338428 FN543-S Single Base Substitution C-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN851-S.SNP.4:8340209 chr04:008340209 0 W/8340209-8340209 FN851-S Single Base Substitution A-G INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN677-S.SNP.4:8348383 chr04:008348383 0 W/8348383-8348383 FN677-S Single Base Substitution G-A INTRON HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3564-S.SNP.4:8353230 chr04:008353230 0 W/8353230-8353230 FN3564-S SNP C -> G AC=2;AN=188;BQB=0.897792;DP=3986;DP4=1862,2008,13,23;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00125439;MQB=9.05801e-12;MQSB=0.0199862;RPB=0.856266;SGB=76.9421;VDB=0.159616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.4:8353539 chr04:008353539 0 W/8353539-8353539 FN3412-S SNP A -> T AC=1;AN=184;BQB=0.225932;DP=3880;DP4=1695,1950,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00036068;MQSB=0.801016;RPB=0.306957;SGB=-35.2739;VDB=0.472389;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.4:8353902 chr04:008353902 0 W/8353902-8353902 FN-66 Single Base Substitution C-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2249-S.SNP.4:8356064 chr04:008356064 0 W/8356064-8356064 FN2249-S SNP C -> T AC=1;AN=190;BQB=0.144237;DP=4073;DP4=2046,1731,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000245519;MQB=3.67758e-06;MQSB=0.231971;RPB=0.931298;SGB=49.0954;VDB=0.0377626;EFF=INTRON(MODIFIER||||1070|LOC_Os04g14860|protein_coding|CODING|LOC_Os04g14860.1|1|1) FN4116-S.SNP.4:8366034 chr04:008366034 0 W/8366034-8366034 FN4116-S SNP A -> C AC=1;AN=182;BQB=0.977108;DP=2954;DP4=1324,1569,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.74595e-08;MQSB=0.940084;RPB=0.65142;SGB=48.6223;VDB=0.0292593;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E375A|539|LOC_Os04g14870|protein_coding|CODING|LOC_Os04g14870.1|6|1) FN3489-S.SNP.4:8368211 chr04:008368211 0 W/8368211-8368211 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.919964;DP=2904;DP4=1356,1462,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.40103e-12;MQSB=0.97011;RPB=0.249443;SGB=80.3949;VDB=0.312393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.4:8368460 chr04:008368460 0 W/8368460-8368460 FN3941-S SNP A -> C AC=2;AN=168;BQB=0.932667;DP=2662;DP4=1313,1233,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.73493e-14;MQSB=0.964949;RPB=0.663547;SGB=96.5026;VDB=0.557046;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.4:8371328 chr04:008371328 0 W/8371328-8371328 FN829-S Single Base Substitution C-T INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2626-S.SNP.4:8372293 chr04:008372293 0 W/8372293-8372293 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.532736;DP=4912;DP4=2457,2216,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000307249;MQSB=0.0516307;RPB=0.827047;SGB=25.849;VDB=0.421106;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.4:8378846 chr04:008378846 0 W/8378846-8378846 FN_N1-151-7 Single Base Substitution T-G Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2356.SNP.4:8380325 chr04:008380325 0 W/8380325-8380325 FN2356 SNP A -> G AC=1;AN=192;BQB=0.836747;DP=4780;DP4=2163,2187,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.010251;MQB=9.25007e-08;MQSB=2.11361e-09;RPB=0.893201;SGB=36.607;VDB=0.266887;EFF=INTRON(MODIFIER||||1478|LOC_Os04g14890|protein_coding|CODING|LOC_Os04g14890.1|1|1) FN2356.SNP.4:8380326 chr04:008380326 0 W/8380326-8380326 FN2356 SNP G -> T AC=1;AN=192;BQB=0.309958;DP=4762;DP4=2191,2289,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0100798;MQB=2.1735e-09;MQSB=3.72183e-06;RPB=0.976967;SGB=36.607;VDB=0.431454;EFF=INTRON(MODIFIER||||1478|LOC_Os04g14890|protein_coding|CODING|LOC_Os04g14890.1|1|1) FN2356.SNP.4:8380327 chr04:008380327 0 W/8380327-8380327 FN2356 SNP C -> T AC=1;AN=192;BQB=0.30389;DP=4765;DP4=2206,2315,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0109129;MQB=3.72424e-10;MQSB=9.23506e-06;RPB=0.980109;SGB=16.7409;VDB=0.341684;EFF=INTRON(MODIFIER||||1478|LOC_Os04g14890|protein_coding|CODING|LOC_Os04g14890.1|1|1) FN3386-S.SNP.4:8380388 chr04:008380388 0 W/8380388-8380388 FN3386-S SNP C -> T AC=1;AN=184;BQB=0.908222;DP=3062;DP4=1436,1484,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0182887;MQB=0.0022192;MQSB=0.104349;RPB=0.726607;SGB=35.1773;VDB=0.517352;EFF=INTRON(MODIFIER||||1478|LOC_Os04g14890|protein_coding|CODING|LOC_Os04g14890.1|1|1) FN2219-S.SNP.4:8381330 chr04:008381330 0 W/8381330-8381330 FN2219-S SNP C -> A AC=2;AN=190;BQB=0.595662;DP=2920;DP4=1134,1307,7,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=9.23658e-10;MQSB=0.240462;RPB=0.679367;SGB=53.8699;VDB=0.417075;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.4:8382532 chr04:008382532 0 W/8382532-8382532 W598-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-181.SNP.4:8384154 chr04:008384154 0 W/8384154-8384154 FN-181 Single Base Substitution G-A INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2791-S.SNP.4:8384585 chr04:008384585 0 W/8384585-8384585 FN2791-S SNP A -> G AC=1;AN=198;BQB=0.734003;DP=4278;DP4=1920,2066,20,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.54099e-20;MQSB=0.77581;RPB=0.769026;SGB=33.2762;VDB=0.376515;EFF=INTRON(MODIFIER||||382|LOC_Os04g14900|protein_coding|CODING|LOC_Os04g14900.1|2|1) FN1735-S.SNP.4:8385329 chr04:008385329 0 W/8385329-8385329 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.625947;DP=2061;DP4=855,1162,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23092e-06;MQSB=0.999992;RPB=0.456949;SGB=23.5329;VDB=0.0272588;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R5H|382|LOC_Os04g14900|protein_coding|CODING|LOC_Os04g14900.1|1|1) FN3946-S.SNP.4:8386371 chr04:008386371 0 W/8386371-8386371 FN3946-S SNP C -> T AC=1;AN=168;BQB=0.87651;DP=3344;DP4=1666,1531,16,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94481e-14;MQSB=0.85351;RPB=0.971202;SGB=14.2064;VDB=0.736574;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.4:8389297 chr04:008389297 0 W/8389297-8389297 FN631-S Single Base Substitution T-C INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2342.SNP.4:8390522 chr04:008390522 0 W/8390522-8390522 FN2342 SNP G -> A AC=1;AN=192;BQB=0.367098;DP=5010;DP4=2639,2144,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000998004;MQB=2.52957e-05;MQSB=0.0579703;RPB=0.900127;SGB=15.1765;VDB=0.850791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.4:8391385 chr04:008391385 0 W/8391385-8391385 FN3824-S SNP C -> G AC=1;AN=190;BQB=0.884986;DP=2427;DP4=1135,1214,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34672e-05;MQSB=0.98933;RPB=0.785895;SGB=39.9877;VDB=0.989699;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.4:8393279 chr04:008393279 0 W/8393279-8393279 FN685-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g14920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3535-S.SNP.4:8396797 chr04:008396797 0 W/8396797-8396797 FN3535-S SNP T -> A AC=1;AN=188;BQB=0.40115;DP=2848;DP4=1498,1287,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.0073736;MQB=0.0041446;MQSB=0.974673;RPB=0.883167;SGB=48.979;VDB=0.714734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I99F|443|LOC_Os04g14930|protein_coding|CODING|LOC_Os04g14930.1|3|1) FN1467-S.SNP.4:8397858 chr04:008397858 0 W/8397858-8397858 FN1467-S Single Base Substitution A-G INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2652-S.SNP.4:8402055 chr04:008402055 0 W/8402055-8402055 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.10558;DP=4752;DP4=2195,2271,15,20;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.000631313;MQB=0.0123813;MQSB=8.63311e-05;RPB=0.82783;SGB=-42.4225;VDB=0.332234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E1044K|1065|LOC_Os04g14940|protein_coding|CODING|LOC_Os04g14940.1|2|1) FN3411-S.SNP.4:8403089 chr04:008403089 0 W/8403089-8403089 FN3411-S SNP G -> A AC=1;AN=184;BQB=0.906629;DP=3613;DP4=1771,1749,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0448381;MQB=0.636533;MQSB=5.64611e-40;RPB=0.645022;SGB=57.786;VDB=0.0033668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T871I|982|LOC_Os04g14950|protein_coding|CODING|LOC_Os04g14950.1|1|1) FN2621-S.SNP.4:8403867 chr04:008403867 0 W/8403867-8403867 FN2621-S SNP G -> T AC=1;AN=200;BQB=0.615053;DP=5559;DP4=2326,2950,14,12;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.171793;MQB=0.476366;MQSB=0;RPB=0.769479;SGB=114.132;VDB=0.499439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R612S|982|LOC_Os04g14950|protein_coding|CODING|LOC_Os04g14950.1|1|1) FN2209-S.SNP.4:8405847 chr04:008405847 0 W/8405847-8405847 FN2209-S SNP C -> T AC=1;AN=190;BQB=0.996753;DP=4213;DP4=1881,1882,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0450985;MQB=0.806867;MQSB=6.55896e-26;RPB=0.810154;SGB=32.5467;VDB=0.719293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.4:8407759 chr04:008407759 0 W/8407759-8407759 FN2591-S SNP C -> T AC=1;AN=198;BQB=0.972967;DP=4878;DP4=2513,2047,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0637556;MQB=0.0135503;MQSB=2.9893e-19;RPB=0.822933;SGB=40.149;VDB=0.110323;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G402S|684|LOC_Os04g14960|protein_coding|CODING|LOC_Os04g14960.1|1|1) FN1462-S.SNP.4:8408192 chr04:008408192 0 W/8408192-8408192 FN1462-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN463-S.SNP.4:8410477 chr04:008410477 0 W/8410477-8410477 FN463-S Single Base Substitution G-C INTRON HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1046-S.SNP.4:8412105 chr04:008412105 0 W/8412105-8412105 FN1046-S Single Base Substitution G-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1557-S.SNP.4:8412274 chr04:008412274 0 W/8412274-8412274 FN1557-S Single Base Substitution G-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. W279-4-1.SNP.4:8412566 chr04:008412566 0 W/8412566-8412566 W279-4-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3288-S.SNP.4:8416963 chr04:008416963 0 W/8416963-8416963 FN3288-S SNP C -> T AC=2;AN=184;BQB=0.879217;DP=2056;DP4=1192,575,8,6;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.00583658;MQB=0.0904275;MQSB=0;RPB=0.542732;SGB=57.786;VDB=0.254452;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R871|1190|LOC_Os04g14980|protein_coding|CODING|LOC_Os04g14980.1|2|1) W470-2-1.SNP.4:8422541 chr04:008422541 0 W/8422541-8422541 W470-2-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g14990 BURP domain containing protein, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2566-S.SNP.4:8430593 chr04:008430593 0 W/8430593-8430593 FN2566-S SNP C -> T AC=1;AN=198;BQB=0.0783954;DP=4102;DP4=1894,1920,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00316919;MQB=0.997218;MQSB=0.923111;RPB=0.0611812;SGB=-32.9965;VDB=0.728488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.4:8440603 chr04:008440603 0 W/8440603-8440603 FN3416-S SNP A -> C AC=1;AN=184;BQB=0.371343;DP=3432;DP4=1329,1901,4,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.69969e-09;MQSB=0.896809;RPB=0.137738;SGB=11.3677;VDB=0.438189;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cGa|L81R|210|LOC_Os04g15520|protein_coding|CODING|LOC_Os04g15520.1|3|1) FN1656-S.SNP.4:8448669 chr04:008448669 0 W/8448669-8448669 FN1656-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1509-S.SNP.4:8452501 chr04:008452501 0 W/8452501-8452501 FN1509-S Single Base Substitution T-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1763-S.SNP.4:8464728 chr04:008464728 0 W/8464728-8464728 FN1763-S SNP C -> T AC=2;AN=188;BQB=0.294378;DP=2720;DP4=1189,1482,11,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.42777e-09;MQSB=0.102224;RPB=0.989816;SGB=46.4225;VDB=0.901883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.4:8465147 chr04:008465147 0 W/8465147-8465147 FN3818-S SNP G -> A AC=2;AN=190;BQB=0.64689;DP=2996;DP4=1240,1639,21,34;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00634179;MQB=1.79674e-09;MQSB=1.41297e-13;RPB=0.9796;SGB=239.371;VDB=0.334704;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.4:8469938 chr04:008469938 0 W/8469938-8469938 FN1402-S Single Base Substitution T-G INTRON HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3889-S.SNP.4:8476830 chr04:008476830 0 W/8476830-8476830 FN3889-S SNP C -> T AC=2;AN=158;BQB=0.809411;DP=2322;DP4=1116,1089,17,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.60197e-14;MQSB=0.903809;RPB=0.995023;SGB=112.609;VDB=0.246609;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.4:8481018 chr04:008481018 0 W/8481018-8481018 FN-144 Single Base Substitution T-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2134-S.SNP.4:8497016 chr04:008497016 0 W/8497016-8497016 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.900362;DP=2964;DP4=1662,1249,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.24359;MQB=0.949571;MQSB=0;RPB=0.431732;SGB=11.3448;VDB=0.643148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.4:8512645 chr04:008512645 0 W/8512645-8512645 FN2438 SNP T -> C AC=1;AN=200;BQB=0.125191;DP=5260;DP4=2348,2588,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98967e-13;MQSB=0.999285;RPB=0.462855;SGB=65.5058;VDB=0.685762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.4:8520812 chr04:008520812 0 W/8520812-8520812 FN1379-S Single Base Substitution C-T INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN4206-S.SNP.4:8520812 chr04:008520812 0 W/8520812-8520812 FN4206-S SNP C -> T AC=2;AN=170;BQB=0.675811;DP=2639;DP4=1252,1296,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.32999e-17;MQSB=0.998434;RPB=0.980178;SGB=114.512;VDB=0.869704;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.4:8521594 chr04:008521594 0 W/8521594-8521594 FN1197-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2140-S.SNP.4:8524407 chr04:008524407 0 W/8524407-8524407 FN2140-S SNP G -> A AC=2;AN=168;BQB=0.477507;DP=4092;DP4=1887,2107,34,39;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.7803e-31;MQSB=0.966934;RPB=0.703645;SGB=148.927;VDB=0.713983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.4:8527832 chr04:008527832 0 W/8527832-8527832 FN2407 SNP A -> T AC=1;AN=200;BQB=0.431006;DP=4314;DP4=1992,1964,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39687e-13;MQSB=0.568174;RPB=0.725784;SGB=-40.4483;VDB=0.311975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.4:8530585 chr04:008530585 0 W/8530585-8530585 FN1269-S Single Base Substitution A-G INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN4166-S.SNP.4:8536841 chr04:008536841 0 W/8536841-8536841 FN4166-S SNP T -> C AC=1;AN=170;BQB=0.899403;DP=2446;DP4=1245,1133,3,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000817661;MQB=1.7239e-07;MQSB=0.99821;RPB=0.979533;SGB=56.7575;VDB=0.456741;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.4:8537220 chr04:008537220 0 W/8537220-8537220 W577-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3573-S.SNP.4:8544757 chr04:008544757 0 W/8544757-8544757 FN3573-S SNP G -> C AC=1;AN=188;BQB=0.911263;DP=3279;DP4=1271,1940,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00274474;MQB=1.01069e-09;MQSB=0.0033895;RPB=0.429779;SGB=94.4119;VDB=0.109977;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.4:8545147 chr04:008545147 0 W/8545147-8545147 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.988644;DP=2464;DP4=1166,1172,12,4;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0324675;MQB=0.0311122;MQSB=0.1866;RPB=0.606192;SGB=44.1818;VDB=0.189755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.4:8545820 chr04:008545820 0 W/8545820-8545820 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.382411;DP=5002;DP4=2652,2091,18,16;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.226909;MQB=0.47605;MQSB=0;RPB=0.928925;SGB=-3.71874;VDB=0.703391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.4:8546403 chr04:008546403 0 W/8546403-8546403 FN3456-S SNP C -> T AC=1;AN=184;BQB=0.96777;DP=3063;DP4=1564,1398,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.02873;MQB=0.0743307;MQSB=3.13646e-05;RPB=0.259587;SGB=30.6558;VDB=0.0120595;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.4:8555299 chr04:008555299 0 W/8555299-8555299 FN_546-3-1 Single Base Substitution G-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN_546-3-1.SNP.4:8555300 chr04:008555300 0 W/8555300-8555300 FN_546-3-1 Single Base Substitution G-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2272-S.SNP.4:8560639 chr04:008560639 0 W/8560639-8560639 FN2272-S SNP C -> T AC=1;AN=190;BQB=0.701033;DP=5099;DP4=2341,2406,14,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02981e-20;MQSB=0.704697;RPB=0.628287;SGB=33.6348;VDB=0.551902;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W308*|610|LOC_Os04g15760|protein_coding|CODING|LOC_Os04g15760.1|4|1);LOF=(LOC_Os04g15760|LOC_Os04g15760|1|1.00);NMD=(LOC_Os04g15760|LOC_Os04g15760|1|1.00) FN3362-S.SNP.4:8569343 chr04:008569343 0 W/8569343-8569343 FN3362-S SNP G -> T AC=1;AN=184;BQB=0.918361;DP=2958;DP4=1301,1574,14,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35411e-11;MQSB=0.992557;RPB=0.273142;SGB=75.8731;VDB=0.501428;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.4:8569900 chr04:008569900 0 W/8569900-8569900 FN-64 Single Base Substitution G-A INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN2088-S.SNP.4:8574555 chr04:008574555 0 W/8574555-8574555 FN2088-S SNP G -> A AC=1;AN=168;BQB=0.684559;DP=1810;DP4=1189,564,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0900552;MQB=0.0545036;MQSB=0.00787603;RPB=0.880347;SGB=38.1788;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.4:8575610 chr04:008575610 0 W/8575610-8575610 FN3388-S SNP C -> G AC=1;AN=184;BQB=0.996182;DP=3357;DP4=1464,1800,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0801311;MQB=0.808761;MQSB=1.15926e-37;RPB=0.780253;SGB=46.3132;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.4:8605518 chr04:008605518 0 W/8605518-8605518 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.510946;DP=2390;DP4=1264,898,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000908344;MQSB=0.00816697;RPB=0.998508;SGB=-0.550503;VDB=0.995273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.4:8610888 chr04:008610888 0 W/8610888-8610888 FN1532-S Single Base Substitution G-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2165-S.SNP.4:8612503 chr04:008612503 0 W/8612503-8612503 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.180248;DP=3773;DP4=1847,1858,26,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.06369e-18;MQSB=0.88054;RPB=0.999704;SGB=-5.03292;VDB=0.838835;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.4:8619934 chr04:008619934 0 W/8619934-8619934 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.94004;DP=2490;DP4=1238,1146,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00401606;MQB=2.48324e-05;MQSB=0.989971;RPB=0.26701;SGB=64.5449;VDB=0.674722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.4:8622509 chr04:008622509 0 W/8622509-8622509 FN1116-S Single Base Substitution T-C INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1565-S.SNP.4:8623823 chr04:008623823 0 W/8623823-8623823 FN1565-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1069-S.SNP.4:8627164 chr04:008627164 0 W/8627164-8627164 FN1069-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g15890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2440.SNP.4:8637078 chr04:008637078 0 W/8637078-8637078 FN2440 SNP G -> A AC=1;AN=200;BQB=0.496662;DP=4656;DP4=1927,2312,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.8342e-14;MQSB=0.65729;RPB=0.951968;SGB=114.132;VDB=0.926699;EFF=UTR_3_PRIME(MODIFIER||432||360|LOC_Os04g15920|protein_coding|CODING|LOC_Os04g15920.1|4|1) FN2301.SNP.4:8640536 chr04:008640536 0 W/8640536-8640536 FN2301 SNP G -> C AC=2;AN=192;BQB=0.630571;DP=4934;DP4=2401,2208,20,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.77533e-20;MQSB=0.993481;RPB=0.776785;SGB=-90.3426;VDB=0.931452;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.4:8641092 chr04:008641092 0 W/8641092-8641092 W500-4-7-1 Single Base Substitution C-T INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN3712-S.SNP.4:8641274 chr04:008641274 0 W/8641274-8641274 FN3712-S SNP C -> A AC=1;AN=190;BQB=0.907021;DP=2957;DP4=1345,1501,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25507e-06;MQSB=0.892356;RPB=0.55378;SGB=25.439;VDB=0.656326;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.4:8645181 chr04:008645181 0 W/8645181-8645181 FN559-S Single Base Substitution G-A INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN559-S.SNP.4:8645182 chr04:008645182 0 W/8645182-8645182 FN559-S Single Base Substitution A-C INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN4164-S.SNP.4:8648386 chr04:008648386 0 W/8648386-8648386 FN4164-S SNP G -> C AC=2;AN=170;BQB=0.931681;DP=1988;DP4=810,1104,9,12;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.09762e-06;MQSB=0.895807;RPB=0.0123652;SGB=87.856;VDB=0.0461457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.4:8652921 chr04:008652921 0 W/8652921-8652921 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.581221;DP=2679;DP4=1356,1277,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.71847e-05;MQSB=0.957774;RPB=0.655457;SGB=2.75988;VDB=0.991318;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V339I|666|LOC_Os04g15930|protein_coding|CODING|LOC_Os04g15930.1|4|1) FN4151-S.SNP.4:8656214 chr04:008656214 0 W/8656214-8656214 FN4151-S SNP G -> A AC=1;AN=170;BQB=0.76532;DP=1796;DP4=847,851,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00389755;MQB=7.62565e-08;MQSB=0.640898;RPB=0.504551;SGB=61.2001;VDB=0.604541;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.4:8656467 chr04:008656467 0 W/8656467-8656467 FN1210-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2445.SNP.4:8657514 chr04:008657514 0 W/8657514-8657514 FN2445 SNP G -> A AC=1;AN=200;BQB=0.947511;DP=4486;DP4=2131,2041,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.22909e-10;MQSB=0.912619;RPB=0.477254;SGB=34.6953;VDB=0.00418796;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A1424|1500|LOC_Os04g15944|protein_coding|CODING|LOC_Os04g15944.1|6|1) FN3417-S.SNP.4:8657833 chr04:008657833 0 W/8657833-8657833 FN3417-S SNP A -> G AC=2;AN=184;BQB=0.822055;DP=3515;DP4=1562,1744,18,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.01822e-26;MQSB=0.926697;RPB=0.956649;SGB=103.972;VDB=0.651969;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V1318A|1500|LOC_Os04g15944|protein_coding|CODING|LOC_Os04g15944.1|6|1) FN2366.SNP.4:8659471 chr04:008659471 0 W/8659471-8659471 FN2366 SNP G -> A AC=1;AN=192;BQB=0.990801;DP=5631;DP4=2728,2522,31,19;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0355177;MQB=2.91474e-08;MQSB=0.000113549;RPB=0.35076;SGB=222.656;VDB=0.167918;EFF=INTRON(MODIFIER||||1500|LOC_Os04g15944|protein_coding|CODING|LOC_Os04g15944.1|4|1) FN2774-S.SNP.4:8660568 chr04:008660568 0 W/8660568-8660568 FN2774-S SNP G -> C AC=1;AN=198;BQB=0.988581;DP=5457;DP4=2159,2970,25,27;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0258384;MQB=0.093803;MQSB=0;RPB=0.991944;SGB=233.354;VDB=0.806682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttG|F519L|1500|LOC_Os04g15944|protein_coding|CODING|LOC_Os04g15944.1|4|1) FN3807-S.SNP.4:8666904 chr04:008666904 0 W/8666904-8666904 FN3807-S SNP A -> C AC=1;AN=190;BQB=0.977327;DP=2554;DP4=1375,1016,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00978857;MQB=0.121828;MQSB=0.000836175;RPB=0.802007;SGB=28.9929;VDB=0.717753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.4:8668382 chr04:008668382 0 W/8668382-8668382 FN2577-S SNP G -> A AC=2;AN=198;BQB=0.489412;DP=3475;DP4=1477,1767,11,7;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00028777;MQB=6.65999e-07;MQSB=0.598346;RPB=0.0679371;SGB=31.9395;VDB=0.412889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.4:8670056 chr04:008670056 0 W/8670056-8670056 FN-375 Single Base Substitution T-C INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3510-S.SNP.4:8670143 chr04:008670143 0 W/8670143-8670143 FN3510-S SNP A -> T AC=1;AN=188;BQB=0.77977;DP=3055;DP4=1261,1490,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00556465;MQB=0.0192113;MQSB=0.00234597;RPB=0.055958;SGB=-56.0757;VDB=0.460308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.4:8670843 chr04:008670843 0 W/8670843-8670843 FN3768-S SNP G -> A AC=1;AN=190;BQB=0.958329;DP=2328;DP4=987,1247,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23689e-12;MQSB=0.835561;RPB=0.608332;SGB=64.5316;VDB=0.0010473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.4:8672136 chr04:008672136 0 W/8672136-8672136 FN3476-S SNP C -> T AC=1;AN=184;BQB=0.655868;DP=3052;DP4=1681,1302,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.24944e-09;MQSB=0.912919;RPB=0.281366;SGB=84.9167;VDB=0.455409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V72I|142|LOC_Os04g15970|protein_coding|CODING|LOC_Os04g15970.1|1|1) FN4107-S.SNP.4:8672612 chr04:008672612 0 W/8672612-8672612 FN4107-S SNP C -> T AC=1;AN=182;BQB=0.90903;DP=3196;DP4=1373,1759,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000242288;MQSB=0.87383;RPB=0.592427;SGB=30.5793;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.4:8672847 chr04:008672847 0 W/8672847-8672847 FN3981-S SNP C -> T AC=1;AN=168;BQB=0.987381;DP=2764;DP4=1288,1321,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00506512;MQB=0.000952006;MQSB=2.59483e-09;RPB=0.839594;SGB=27.8864;VDB=0.824582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.4:8673069 chr04:008673069 0 W/8673069-8673069 FN2617-S SNP G -> A AC=1;AN=198;BQB=0.661565;DP=4347;DP4=2458,1619,13,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00684e-11;MQSB=0.999659;RPB=0.386133;SGB=77.1196;VDB=0.432501;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.4:8677736 chr04:008677736 0 W/8677736-8677736 FN573-S Single Base Substitution G-C INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3416-S.SNP.4:8678210 chr04:008678210 0 W/8678210-8678210 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.02604;DP=3079;DP4=1591,1405,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.0688535;MQB=0.904716;MQSB=2.66247e-44;RPB=0.960461;SGB=23.2751;VDB=0.707795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.4:8681774 chr04:008681774 0 W/8681774-8681774 FN2264-S SNP A -> G AC=2;AN=190;BQB=0.989452;DP=4460;DP4=2077,2064,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.17391e-10;MQSB=0.155352;RPB=0.29051;SGB=85.5263;VDB=0.040727;EFF=INTRON(MODIFIER||||194|LOC_Os04g15980|protein_coding|CODING|LOC_Os04g15980.1|1|1) FN543-S.SNP.4:8683531 chr04:008683531 0 W/8683531-8683531 FN543-S Single Base Substitution C-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3432-S.SNP.4:8701141 chr04:008701141 0 W/8701141-8701141 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.936399;DP=2603;DP4=1238,1220,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0165194;MQB=0.0224583;MQSB=0.404132;RPB=0.936875;SGB=66.8296;VDB=0.00924767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.4:8701722 chr04:008701722 0 W/8701722-8701722 FN2439 SNP C -> T AC=1;AN=200;BQB=0.584597;DP=4245;DP4=2175,1821,3,7;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.018139;MQB=0.84339;MQSB=3.27587e-34;RPB=0.994979;SGB=25.849;VDB=0.89288;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.4:8712135 chr04:008712135 0 W/8712135-8712135 FN1734-S SNP G -> C AC=1;AN=188;BQB=0.961756;DP=1753;DP4=765,917,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00172977;MQSB=0.997153;RPB=0.899335;SGB=35.3493;VDB=0.886285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.4:8712135 chr04:008712135 0 W/8712135-8712135 FN2362 SNP G -> C AC=1;AN=192;BQB=0.87014;DP=4926;DP4=1649,2986,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49124e-11;MQSB=0.991732;RPB=0.592251;SGB=82.5522;VDB=0.837119;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.4:8723131 chr04:008723131 0 W/8723131-8723131 FN460-S Single Base Substitution G-C INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1661-S.SNP.4:8723991 chr04:008723991 0 W/8723991-8723991 FN1661-S Single Base Substitution C-T INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN3356-S.SNP.4:8726508 chr04:008726508 0 W/8726508-8726508 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.997607;DP=2053;DP4=468,1437,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00340964;MQB=0.00248443;MQSB=0.000835123;RPB=0.577403;SGB=20.7533;VDB=0.788754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.4:8735573 chr04:008735573 0 W/8735573-8735573 FN3295-S SNP C -> T AC=1;AN=184;BQB=0.576798;DP=3929;DP4=1698,2090,16,13;HOB=5.90737e-05;ICB=0.00011879;MQ=14;MQ0F=0.497073;MQB=0.0598367;MQSB=0;RPB=0.380684;SGB=-8.45255;VDB=0.263783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E1147K|1822|LOC_Os04g16100|protein_coding|CODING|LOC_Os04g16100.1|3|1) FN690-S.SNP.4:8757267 chr04:008757267 0 W/8757267-8757267 FN690-S Single Base Substitution T-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1080-S.SNP.4:8757671 chr04:008757671 0 W/8757671-8757671 FN1080-S Single Base Substitution G-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN759-S.SNP.4:8763778 chr04:008763778 0 W/8763778-8763778 FN759-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16140 expressed protein SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2658-S.SNP.4:8765173 chr04:008765173 0 W/8765173-8765173 FN2658-S SNP A -> G AC=2;AN=200;BQB=0.859617;DP=4953;DP4=2414,2070,27,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.64712e-30;MQSB=0.990711;RPB=0.984144;SGB=-50.3191;VDB=0.319932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.4:8774484 chr04:008774484 0 W/8774484-8774484 FN1431-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-249.SNP.4:8790574 chr04:008790574 0 W/8790574-8790574 FN-249 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN4071-S.SNP.4:8798908 chr04:008798908 0 W/8798908-8798908 FN4071-S SNP G -> A AC=1;AN=182;BQB=0.901233;DP=2922;DP4=1526,1315,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.29718e-08;MQSB=0.780775;RPB=0.956768;SGB=49.6712;VDB=0.369927;EFF=INTRON(MODIFIER||||1218|LOC_Os04g16200|protein_coding|CODING|LOC_Os04g16200.1|9|1) FN3867-S.SNP.4:8803593 chr04:008803593 0 W/8803593-8803593 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.685155;DP=2607;DP4=1263,1254,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000767165;MQB=0.000232363;MQSB=0.242631;RPB=0.389264;SGB=68.9144;VDB=0.0658089;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.4:8806637 chr04:008806637 0 W/8806637-8806637 FN-264 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN2652-S.SNP.4:8812249 chr04:008812249 0 W/8812249-8812249 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.57853;DP=4865;DP4=2128,2448,8,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00061665;MQB=0.00241863;MQSB=0.30244;RPB=0.980731;SGB=54.2646;VDB=0.647103;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.4:8814400 chr04:008814400 0 W/8814400-8814400 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN493-S.SNP.4:8814401 chr04:008814401 0 W/8814401-8814401 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-211.SNP.4:8815518 chr04:008815518 0 W/8815518-8815518 FN-211 Single Base Substitution G-A INTRON HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2582-S.SNP.4:8818698 chr04:008818698 0 W/8818698-8818698 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.602685;DP=4283;DP4=1995,2026,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.157366;MQB=0.975683;MQSB=0;RPB=0.589397;SGB=29.3637;VDB=0.834738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.4:8826249 chr04:008826249 0 W/8826249-8826249 FN2479 SNP C -> A AC=1;AN=200;BQB=0.920744;DP=4491;DP4=2206,2048,11,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00467602;MQB=7.71199e-11;MQSB=0.953013;RPB=0.911076;SGB=19.1209;VDB=0.142714;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T530|1328|LOC_Os04g16250|protein_coding|CODING|LOC_Os04g16250.1|4|1) FN3375-S.SNP.4:8829256 chr04:008829256 0 W/8829256-8829256 FN3375-S SNP C -> A AC=1;AN=184;BQB=0.955817;DP=2891;DP4=1413,1303,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.000691802;MQB=0.000530433;MQSB=0.851374;RPB=0.675318;SGB=63.9222;VDB=0.00467062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.4:8835607 chr04:008835607 0 W/8835607-8835607 FN2494 SNP G -> A AC=1;AN=200;BQB=0.993116;DP=4767;DP4=2442,2029,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209776;MQB=3.75636e-12;MQSB=0.92449;RPB=0.385492;SGB=45.1159;VDB=0.275847;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.4:8836905 chr04:008836905 0 W/8836905-8836905 FN-387 Single Base Substitution G-T INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN4240-S.SNP.4:8839523 chr04:008839523 0 W/8839523-8839523 FN4240-S SNP C -> T AC=2;AN=170;BQB=0.740578;DP=2649;DP4=1298,1253,6,16;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00302001;MQB=0.00766843;MQSB=0.8345;RPB=0.95726;SGB=92.2986;VDB=0.141462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.4:8840726 chr04:008840726 0 W/8840726-8840726 FN3926-S SNP C -> T AC=2;AN=158;BQB=0.827694;DP=2445;DP4=1079,1249,26,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.11366e-27;MQSB=0.619605;RPB=0.854926;SGB=233.966;VDB=0.193542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.4:8842590 chr04:008842590 0 W/8842590-8842590 FN1317-S Single Base Substitution A-C INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN-290.SNP.4:8845046 chr04:008845046 0 W/8845046-8845046 FN-290 Single Base Substitution G-A INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2617-S.SNP.4:8846305 chr04:008846305 0 W/8846305-8846305 FN2617-S SNP C -> G AC=1;AN=198;BQB=0.628219;DP=4004;DP4=2069,1765,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.87842e-14;MQSB=0.990201;RPB=0.907173;SGB=50.1053;VDB=0.356668;EFF=INTRON(MODIFIER||||614|LOC_Os04g16280|protein_coding|CODING|LOC_Os04g16280.1|1|1) FN-158.SNP.4:8850726 chr04:008850726 0 W/8850726-8850726 FN-158 Single Base Substitution A-G INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1293-S.SNP.4:8851877 chr04:008851877 0 W/8851877-8851877 FN1293-S Single Base Substitution A-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN2653-S.SNP.4:8855809 chr04:008855809 0 W/8855809-8855809 FN2653-S SNP T -> C AC=1;AN=200;BQB=0.930684;DP=5050;DP4=2464,2272,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46604e-18;MQSB=0.9762;RPB=0.55186;SGB=65.9573;VDB=0.263195;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.4:8857902 chr04:008857902 0 W/8857902-8857902 FN-248 Single Base Substitution G-C INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN4148-S.SNP.4:8859425 chr04:008859425 0 W/8859425-8859425 FN4148-S SNP A -> C AC=1;AN=170;BQB=0.526807;DP=2762;DP4=1386,1309,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.25816e-07;MQSB=0.988332;RPB=0.790356;SGB=22.3266;VDB=0.838039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.4:8859794 chr04:008859794 0 W/8859794-8859794 FN1079-S Single Base Substitution A-C INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3667-S.SNP.4:8863079 chr04:008863079 0 W/8863079-8863079 FN3667-S SNP T -> C AC=1;AN=190;BQB=0.905918;DP=2792;DP4=1196,1299,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06124e-07;MQSB=0.948805;RPB=0.928298;SGB=43.2083;VDB=0.076948;EFF=INTRON(MODIFIER||||366|LOC_Os04g16314|protein_coding|CODING|LOC_Os04g16314.1|3|1) FN660-S.SNP.4:8864116 chr04:008864116 0 W/8864116-8864116 FN660-S Single Base Substitution C-A INTRON HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN3422-S.SNP.4:8875748 chr04:008875748 0 W/8875748-8875748 FN3422-S SNP G -> A AC=1;AN=184;BQB=0.999985;DP=2857;DP4=1419,1348,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37121e-10;MQSB=0.990322;RPB=0.988893;SGB=25.7969;VDB=0.684447;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.4:8881385 chr04:008881385 0 W/8881385-8881385 FN1035-S Single Base Substitution G-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2767-S.SNP.4:8886309 chr04:008886309 0 W/8886309-8886309 FN2767-S SNP G -> C AC=1;AN=198;BQB=0.47217;DP=4228;DP4=1997,1996,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00165563;MQB=1.11467e-06;MQSB=0.450359;RPB=0.872065;SGB=90.9049;VDB=0.575897;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V337|486|LOC_Os04g16350|protein_coding|CODING|LOC_Os04g16350.1|7|1) FN1467-S.SNP.4:8888993 chr04:008888993 0 W/8888993-8888993 FN1467-S Single Base Substitution A-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3941-S.SNP.4:8889503 chr04:008889503 0 W/8889503-8889503 FN3941-S SNP G -> T AC=2;AN=168;BQB=0.443909;DP=2430;DP4=1184,1142,8,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.30365e-06;MQSB=0.99712;RPB=0.7388;SGB=24.6155;VDB=0.763618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.4:8890454 chr04:008890454 0 W/8890454-8890454 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.68952;DP=2805;DP4=1295,1439,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29871e-06;MQSB=0.984792;RPB=0.766217;SGB=53.6492;VDB=0.910189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.4:8895581 chr04:008895581 0 W/8895581-8895581 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.414182;DP=4794;DP4=2172,2421,8,5;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.154568;MQB=0.915287;MQSB=0;RPB=0.451072;SGB=54.2646;VDB=0.417606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.4:8896046 chr04:008896046 0 W/8896046-8896046 FN1385-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2784-S.SNP.4:8897770 chr04:008897770 0 W/8897770-8897770 FN2784-S SNP G -> C AC=1;AN=198;BQB=0.542005;DP=4196;DP4=2008,2023,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=25;MQ0F=0.215205;MQB=0.789531;MQSB=5.58936e-16;RPB=0.525117;SGB=65.3149;VDB=0.883659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S618T|1986|LOC_Os04g16370|protein_coding|CODING|LOC_Os04g16370.1|1|1) FN848-S.SNP.4:8902758 chr04:008902758 0 W/8902758-8902758 FN848-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3949-S.SNP.4:8902812 chr04:008902812 0 W/8902812-8902812 FN3949-S SNP T -> C AC=2;AN=168;BQB=0.452673;DP=2628;DP4=1174,1276,13,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.62835e-14;MQSB=0.0949353;RPB=0.993055;SGB=99.9335;VDB=0.999655;EFF=INTRON(MODIFIER||||822|LOC_Os04g16380|protein_coding|CODING|LOC_Os04g16380.1|6|1) FN1448-S.SNP.4:8903060 chr04:008903060 0 W/8903060-8903060 FN1448-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2308.SNP.4:8903454 chr04:008903454 0 W/8903454-8903454 FN2308 SNP T -> A AC=2;AN=192;BQB=0.882603;DP=5091;DP4=2204,2507,22,21;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0732666;MQB=0.679936;MQSB=1.1038e-07;RPB=0.645223;SGB=48.0279;VDB=0.290068;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E521D|822|LOC_Os04g16380|protein_coding|CODING|LOC_Os04g16380.1|4|1) FN1420-S.SNP.4:8907100 chr04:008907100 0 W/8907100-8907100 FN1420-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN-179.SNP.4:8908813 chr04:008908813 0 W/8908813-8908813 FN-179 Single Base Substitution G-C INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-269.SNP.4:8908813 chr04:008908813 0 W/8908813-8908813 FN-269 Single Base Substitution G-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3383-S.SNP.4:8908813 chr04:008908813 0 W/8908813-8908813 FN3383-S SNP G -> C AC=2;AN=184;BQB=0.99266;DP=2910;DP4=1480,1329,23,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.20523e-25;MQSB=0.999781;RPB=0.720616;SGB=188.918;VDB=0.320588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.4:8908813 chr04:008908813 0 W/8908813-8908813 FN3776-S SNP G -> C AC=2;AN=190;BQB=0.951268;DP=2676;DP4=1431,1146,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.19967e-17;MQSB=0.902291;RPB=0.805044;SGB=117.403;VDB=0.781892;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.4:8908813 chr04:008908813 0 W/8908813-8908813 FN723-S Single Base Substitution G-C INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. W463-2-1.SNP.4:8910473 chr04:008910473 0 W/8910473-8910473 W463-2-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3705-S.SNP.4:8911474 chr04:008911474 0 W/8911474-8911474 FN3705-S SNP G -> A AC=1;AN=190;BQB=0.755594;DP=2851;DP4=1324,1421,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80889e-05;MQSB=0.996614;RPB=0.693278;SGB=8.33661;VDB=0.721112;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T481|1128|LOC_Os04g16400|protein_coding|CODING|LOC_Os04g16400.1|3|1) FN886-S.SNP.4:8912519 chr04:008912519 0 W/8912519-8912519 FN886-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN587-S.SNP.4:8913156 chr04:008913156 0 W/8913156-8913156 FN587-S Single Base Substitution C-G INTRON HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3800-S.SNP.4:8924358 chr04:008924358 0 W/8924358-8924358 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.610479;DP=2592;DP4=1219,1295,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000385802;MQB=8.44282e-08;MQSB=0.942081;RPB=0.00548187;SGB=31.3213;VDB=0.160737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A59T|827|LOC_Os04g16420|protein_coding|CODING|LOC_Os04g16420.1|1|1) FN1555-S.SNP.4:8924601 chr04:008924601 0 W/8924601-8924601 FN1555-S Single Base Substitution A-C INTRON Homo SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1007-S.SNP.4:8924872 chr04:008924872 0 W/8924872-8924872 FN1007-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g16420 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2719-S.SNP.4:8926661 chr04:008926661 0 W/8926661-8926661 FN2719-S SNP G -> A AC=1;AN=200;BQB=0.996632;DP=5516;DP4=2792,2442,5,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0116026;MQB=0.0857965;MQSB=0.224211;RPB=0.98947;SGB=49.6594;VDB=0.558117;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W614*|827|LOC_Os04g16420|protein_coding|CODING|LOC_Os04g16420.1|4|1) FN2296.SNP.4:8934072 chr04:008934072 0 W/8934072-8934072 FN2296 SNP G -> A AC=1;AN=192;BQB=0.735108;DP=6024;DP4=2841,2829,22,21;HOB=5.42535e-05;ICB=0.000109072;MQ=14;MQ0F=0.362882;MQB=0.000273748;MQSB=1.24176e-07;RPB=0.00367444;SGB=190.705;VDB=0.00368015;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N585|1822|LOC_Os04g16430|protein_coding|CODING|LOC_Os04g16430.1|3|1) FN2779-S.SNP.4:8934072 chr04:008934072 0 W/8934072-8934072 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.997543;DP=4737;DP4=2227,2312,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=14;MQ0F=0.374921;MQB=0.00696924;MQSB=2.18652e-07;RPB=0.432761;SGB=52.7004;VDB=0.412422;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N585|1822|LOC_Os04g16430|protein_coding|CODING|LOC_Os04g16430.1|3|1) FN3832-S.SNP.4:8934072 chr04:008934072 0 W/8934072-8934072 FN3832-S SNP G -> A AC=2;AN=190;BQB=0.914367;DP=4230;DP4=1816,2252,26,14;HOB=0.020831;ICB=0.494793;MQ=21;MQ0F=0.288652;MQB=0.0705959;MQSB=3.51882e-16;RPB=0.468153;SGB=176.604;VDB=0.713595;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N585|1822|LOC_Os04g16430|protein_coding|CODING|LOC_Os04g16430.1|3|1) FN2468.SNP.4:8941795 chr04:008941795 0 W/8941795-8941795 FN2468 SNP T -> C AC=1;AN=200;BQB=0.462611;DP=4426;DP4=2005,1986,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.43292e-08;MQSB=0.0655649;RPB=0.857144;SGB=7.88476;VDB=0.561782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.4:8958488 chr04:008958488 0 W/8958488-8958488 FN2493 SNP G -> A AC=1;AN=200;BQB=0.219287;DP=2541;DP4=1227,1078,6,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000213257;MQSB=0.0074767;RPB=0.920833;SGB=22.2439;VDB=0.774083;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S113|132|LOC_Os04g16480|protein_coding|CODING|LOC_Os04g16480.1|1|1) FN3883-S.SNP.4:8958989 chr04:008958989 0 W/8958989-8958989 FN3883-S SNP T -> C AC=1;AN=158;BQB=0.970978;DP=2204;DP4=918,1067,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0635209;MQB=0.767618;MQSB=5.48933e-17;RPB=0.993121;SGB=23.9652;VDB=0.560194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.4:8959179 chr04:008959179 0 W/8959179-8959179 FN2719-S SNP C -> T AC=1;AN=200;BQB=0.780957;DP=5005;DP4=2808,1953,18,10;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0509491;MQB=0.356151;MQSB=6.15489e-05;RPB=0.91106;SGB=90.7419;VDB=0.00763838;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.4:8961623 chr04:008961623 0 W/8961623-8961623 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.307646;DP=3510;DP4=1680,1495,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000569801;MQB=5.22309e-05;MQSB=0.262782;RPB=0.895734;SGB=25.7687;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.4:8962499 chr04:008962499 0 W/8962499-8962499 FN4165-S SNP T -> A AC=1;AN=170;BQB=0.999991;DP=2843;DP4=1346,1384,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0249736;MQB=0.210188;MQSB=0.0565802;RPB=0.649925;SGB=65.6427;VDB=0.511745;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.4:8963555 chr04:008963555 0 W/8963555-8963555 FN598-S Single Base Substitution G-A INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN-368.SNP.4:8965765 chr04:008965765 0 W/8965765-8965765 FN-368 Single Base Substitution C-T INTERGENIC HOMO SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN2622-S.SNP.4:8967869 chr04:008967869 0 W/8967869-8967869 FN2622-S SNP C -> T AC=1;AN=200;BQB=0.822753;DP=4774;DP4=2239,2327,16,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.000418936;MQB=4.60671e-07;MQSB=4.23049e-20;RPB=0.367627;SGB=63.3521;VDB=0.46484;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.4:8968412 chr04:008968412 0 W/8968412-8968412 FN4167-S SNP C -> T AC=2;AN=170;BQB=0.919305;DP=2733;DP4=1318,1334,12,8;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00292719;MQB=4.66261e-06;MQSB=0.883142;RPB=0.476369;SGB=83.4133;VDB=0.131676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.4:8969313 chr04:008969313 0 W/8969313-8969313 FN1519-S Single Base Substitution C-A INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3705-S.SNP.4:8969684 chr04:008969684 0 W/8969684-8969684 FN3705-S SNP G -> A AC=2;AN=190;BQB=0.826456;DP=1764;DP4=708,969,3,14;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0697279;MQB=0.931844;MQSB=2.51231e-12;RPB=0.760195;SGB=71.8647;VDB=0.092224;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.4:8973869 chr04:008973869 0 W/8973869-8973869 FN420-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN-361.SNP.4:8973960 chr04:008973960 0 W/8973960-8973960 FN-361 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g16510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3934-S.SNP.4:8974324 chr04:008974324 0 W/8974324-8974324 FN3934-S SNP C -> A AC=2;AN=158;BQB=0.948309;DP=2734;DP4=1449,1162,22,8;HOB=0.024996;ICB=0.493752;MQ=44;MQ0F=0.00804682;MQB=0.00337171;MQSB=0.66384;RPB=0.855228;SGB=125.717;VDB=0.426105;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R507|1529|LOC_Os04g16510|protein_coding|CODING|LOC_Os04g16510.1|3|1) FN999-S.SNP.4:8974692 chr04:008974692 0 W/8974692-8974692 FN999-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-379.SNP.4:8974886 chr04:008974886 0 W/8974886-8974886 FN-379 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g16510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN2134-S.SNP.4:8975938 chr04:008975938 0 W/8975938-8975938 FN2134-S SNP T -> C AC=1;AN=168;BQB=4.92788e-06;DP=3928;DP4=1901,1915,35,32;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0414969;MQB=8.17525e-20;MQSB=0.68904;RPB=0.995776;SGB=-2279.86;VDB=0.416697;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S1045|1529|LOC_Os04g16510|protein_coding|CODING|LOC_Os04g16510.1|3|1) FN3799-S.SNP.4:8979387 chr04:008979387 0 W/8979387-8979387 FN3799-S SNP C -> G AC=1;AN=190;BQB=0.763876;DP=2923;DP4=1696,1119,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0123161;MQB=0.322602;MQSB=0.701541;RPB=0.427828;SGB=71.8647;VDB=0.538759;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.4:8979393 chr04:008979393 0 W/8979393-8979393 FN978-S Single Base Substitution C-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3567-S.SNP.4:8984613 chr04:008984613 0 W/8984613-8984613 FN3567-S SNP T -> C AC=1;AN=188;BQB=0.965181;DP=2596;DP4=1238,1287,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.398e-06;MQSB=0.993453;RPB=0.984107;SGB=39.8925;VDB=0.775568;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E763|934|LOC_Os04g16530|protein_coding|CODING|LOC_Os04g16530.1|6|1) FN2725-S.SNP.4:8985558 chr04:008985558 0 W/8985558-8985558 FN2725-S SNP A -> C AC=1;AN=200;BQB=0.604467;DP=4876;DP4=2193,2465,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.45049e-11;MQSB=0.999716;RPB=0.0730631;SGB=14.3054;VDB=0.0095446;EFF=INTRON(MODIFIER||||934|LOC_Os04g16530|protein_coding|CODING|LOC_Os04g16530.1|4|1) FN832-S.SNP.4:8986434 chr04:008986434 0 W/8986434-8986434 FN832-S Single Base Substitution A-G INTRON HOMO SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN464-S.SNP.4:8986521 chr04:008986521 0 W/8986521-8986521 FN464-S Single Base Substitution G-C INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN519-S.SNP.4:8988367 chr04:008988367 0 W/8988367-8988367 FN519-S Single Base Substitution A-T INTRON HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN2245-S.SNP.4:8993254 chr04:008993254 0 W/8993254-8993254 FN2245-S SNP C -> T AC=1;AN=190;BQB=0.115731;DP=10495;DP4=4694,5047,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.147404;MQB=0.884955;MQSB=0;RPB=0.819345;SGB=-138.431;VDB=0.906854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.4:8995382 chr04:008995382 0 W/8995382-8995382 FN1396-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16540 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2795-S.SNP.4:8998768 chr04:008998768 0 W/8998768-8998768 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.783192;DP=4346;DP4=2168,1928,14,43;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0202485;MQB=9.71465e-26;MQSB=0.533793;RPB=4.15841e-06;SGB=-1776.14;VDB=0.105075;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1373|1928|LOC_Os04g16550|protein_coding|CODING|LOC_Os04g16550.1|4|1) FN2354.SNP.4:9003498 chr04:009003498 0 W/9003498-9003498 FN2354 SNP A -> T AC=1;AN=192;BQB=0.873187;DP=7238;DP4=2463,4259,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.19066;MQB=0.0222785;MQSB=0;RPB=0.356689;SGB=31.4783;VDB=0.689322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.4:9009536 chr04:009009536 0 W/9009536-9009536 FN1022-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g16570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1617-S.SNP.4:9014862 chr04:009014862 0 W/9014862-9014862 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2410.SNP.4:9022285 chr04:009022285 0 W/9022285-9022285 FN2410 SNP C -> G AC=1;AN=200;BQB=0.710119;DP=4087;DP4=1924,1972,16,0;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0455102;MQB=0.000226184;MQSB=0.00135462;RPB=0.929814;SGB=68.0801;VDB=0.77123;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N226K|511|LOC_Os04g16590|protein_coding|CODING|LOC_Os04g16590.1|3|1) FN4148-S.SNP.4:9037040 chr04:009037040 0 W/9037040-9037040 FN4148-S SNP T -> A AC=1;AN=170;BQB=0.341451;DP=2590;DP4=1126,1288,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0660232;MQB=0.94966;MQSB=9.25712e-19;RPB=0.998101;SGB=10.1031;VDB=0.970627;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.4:9043284 chr04:009043284 0 W/9043284-9043284 FN762-S Single Base Substitution T-A INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. W443-5-1-3.SNP.4:9045427 chr04:009045427 0 W/9045427-9045427 W443-5-1-3 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g16630 retrotransposon protein, putative, unclassified, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3503-S.SNP.4:9046265 chr04:009046265 0 W/9046265-9046265 FN3503-S SNP G -> T AC=1;AN=188;BQB=0.93763;DP=2717;DP4=1237,1405,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.00115798;MQSB=0.55624;RPB=0.977209;SGB=30.8063;VDB=0.859903;EFF=INTRON(MODIFIER||||1222|LOC_Os04g16630|protein_coding|CODING|LOC_Os04g16630.1|3|1) FN721-S.SNP.4:9049427 chr04:009049427 0 W/9049427-9049427 FN721-S Single Base Substitution G-A INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3858-S.SNP.4:9052267 chr04:009052267 0 W/9052267-9052267 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.952753;DP=2651;DP4=1269,1273,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.9629e-07;MQSB=0.999993;RPB=0.859096;SGB=27.3346;VDB=0.960008;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E97K|201|LOC_Os04g16640|protein_coding|CODING|LOC_Os04g16640.1|2|1) FN915-S.SNP.4:9068292 chr04:009068292 0 W/9068292-9068292 FN915-S Single Base Substitution C-G INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN1106-S.SNP.4:9075708 chr04:009075708 0 W/9075708-9075708 FN1106-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g16680 fructose-1,6-bisphosphatase, putative, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1224-S.SNP.4:9081809 chr04:009081809 0 W/9081809-9081809 FN1224-S Single Base Substitution G-C INTRON HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1258-S.SNP.4:9081809 chr04:009081809 0 W/9081809-9081809 FN1258-S Single Base Substitution G-C INTRON HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2444.SNP.4:9081809 chr04:009081809 0 W/9081809-9081809 FN2444 SNP G -> C AC=2;AN=200;BQB=0.990852;DP=4353;DP4=2134,1941,26,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.92631e-30;MQSB=0.976226;RPB=0.563994;SGB=64.0657;VDB=0.788384;EFF=INTRON(MODIFIER||||115|LOC_Os04g16690|protein_coding|CODING|LOC_Os04g16690.1|1|1) FN3916-S.SNP.4:9081809 chr04:009081809 0 W/9081809-9081809 FN3916-S SNP G -> C AC=1;AN=158;BQB=0.895295;DP=2390;DP4=1119,1180,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.79706e-11;MQSB=0.891303;RPB=0.974167;SGB=47.5512;VDB=0.13909;EFF=INTRON(MODIFIER||||115|LOC_Os04g16690|protein_coding|CODING|LOC_Os04g16690.1|1|1) FN784-S.SNP.4:9081809 chr04:009081809 0 W/9081809-9081809 FN784-S Single Base Substitution G-C INTRON HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2295.SNP.4:9086210 chr04:009086210 0 W/9086210-9086210 FN2295 SNP C -> T AC=1;AN=192;BQB=0.375017;DP=4930;DP4=2214,2381,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.122921;MQB=0.898289;MQSB=3.05455e-29;RPB=0.013192;SGB=46.8644;VDB=0.0612553;EFF=INTRON(MODIFIER||||95|LOC_Os04g16700|protein_coding|CODING|LOC_Os04g16700.1|1|1) FN3721-S.SNP.4:9087679 chr04:009087679 0 W/9087679-9087679 FN3721-S SNP C -> T AC=1;AN=190;BQB=0.992455;DP=3125;DP4=1563,1435,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.19808;MQB=0.529162;MQSB=3.24813e-40;RPB=0.973043;SGB=85.5263;VDB=0.506206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.4:9087918 chr04:009087918 0 W/9087918-9087918 FN3911-S SNP A -> G AC=1;AN=158;BQB=0.980479;DP=2827;DP4=1282,1358,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0636717;MQB=0.00339143;MQSB=0.106309;RPB=0.547923;SGB=30.704;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.4:9088920 chr04:009088920 0 W/9088920-9088920 FN4023-S SNP C -> A AC=1;AN=168;BQB=0.0728975;DP=2835;DP4=1530,1190,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.297354;MQB=0.752049;MQSB=0;RPB=0.715726;SGB=41.6096;VDB=0.843828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W191L|217|LOC_Os04g16710|protein_coding|CODING|LOC_Os04g16710.1|1|1) FN1461-S.SNP.4:9212804 chr04:009212804 0 W/9212804-9212804 FN1461-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g16810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN3387-S.SNP.4:9212804 chr04:009212804 0 W/9212804-9212804 FN3387-S SNP G -> C AC=2;AN=184;BQB=0.961922;DP=2657;DP4=1373,1191,9,10;HOB=0.0215028;ICB=0.494625;MQ=15;MQ0F=0.524652;MQB=0.415858;MQSB=0.00013011;RPB=0.760615;SGB=80.3949;VDB=0.916037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L1220V|1971|LOC_Os04g16810|protein_coding|CODING|LOC_Os04g16810.1|3|1) FN3554-S.SNP.4:9212804 chr04:009212804 0 W/9212804-9212804 FN3554-S SNP G -> C AC=1;AN=188;BQB=0.993937;DP=2660;DP4=1349,1246,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=16;MQ0F=0.518421;MQB=0.116567;MQSB=1.54865e-09;RPB=0.197047;SGB=57.244;VDB=0.921824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L1220V|1971|LOC_Os04g16810|protein_coding|CODING|LOC_Os04g16810.1|3|1) FN2239-S.SNP.4:9215283 chr04:009215283 0 W/9215283-9215283 FN2239-S SNP G -> C AC=1;AN=190;BQB=0.946325;DP=5047;DP4=2363,2253,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.383198;MQB=9.57663e-06;MQSB=1.78461e-10;RPB=0.999062;SGB=89.4087;VDB=0.0332347;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccG|P393|1971|LOC_Os04g16810|protein_coding|CODING|LOC_Os04g16810.1|3|1) FN3760-S.SNP.4:9215283 chr04:009215283 0 W/9215283-9215283 FN3760-S SNP G -> C AC=1;AN=190;BQB=0.921044;DP=4304;DP4=2228,1966,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=12;MQ0F=0.50302;MQB=0.339283;MQSB=0;RPB=0.97733;SGB=76.4186;VDB=0.474316;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccG|P393|1971|LOC_Os04g16810|protein_coding|CODING|LOC_Os04g16810.1|3|1) FN478-S.SNP.4:9215283 chr04:009215283 0 W/9215283-9215283 FN478-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-257.SNP.4:9221395 chr04:009221395 0 W/9221395-9221395 FN-257 Single Base Substitution C-T INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2456.SNP.4:9224469 chr04:009224469 0 W/9224469-9224469 FN2456 SNP G -> A AC=1;AN=200;BQB=0.925657;DP=4296;DP4=2028,2015,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.50493e-12;MQSB=0.340763;RPB=0.342613;SGB=65.5058;VDB=0.486708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T348M|558|LOC_Os04g16850|protein_coding|CODING|LOC_Os04g16850.1|4|1) FN373-S.SNP.4:9229667 chr04:009229667 0 W/9229667-9229667 FN373-S Single Base Substitution C-G INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3667-S.SNP.4:9238640 chr04:009238640 0 W/9238640-9238640 FN3667-S SNP G -> A AC=1;AN=190;BQB=0.965589;DP=2558;DP4=1180,1294,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78287e-05;MQSB=0.998316;RPB=0.913211;SGB=25.439;VDB=0.843346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.4:9245989 chr04:009245989 0 W/9245989-9245989 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.482186;DP=3826;DP4=2129,1550,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00548876;MQB=4.36238e-05;MQSB=0.000751467;RPB=0.0403353;SGB=35.7638;VDB=0.0692038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.4:9245990 chr04:009245990 0 W/9245990-9245990 FN2582-S SNP G -> T AC=1;AN=198;BQB=0.942886;DP=3830;DP4=2091,1540,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00522193;MQB=2.89001e-05;MQSB=0.000159528;RPB=0.0101998;SGB=25.7687;VDB=0.0453183;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.4:9249634 chr04:009249634 0 W/9249634-9249634 FN2670-S SNP T -> C AC=2;AN=200;BQB=0.258891;DP=4769;DP4=2272,2171,26,34;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00146781;MQB=8.19482e-06;MQSB=0.174619;RPB=0.943;SGB=76.9071;VDB=0.953317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V289A|1400|LOC_Os04g16910|protein_coding|CODING|LOC_Os04g16910.1|4|1) FN3598-S.SNP.4:9251907 chr04:009251907 0 W/9251907-9251907 FN3598-S SNP G -> A AC=1;AN=188;BQB=0.900861;DP=3011;DP4=1609,1353,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0139489;MQB=0.00207373;MQSB=0.000808199;RPB=0.352427;SGB=28.8977;VDB=0.687218;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L832|1400|LOC_Os04g16910|protein_coding|CODING|LOC_Os04g16910.1|8|1) FN2239-S.SNP.4:9256170 chr04:009256170 0 W/9256170-9256170 FN2239-S SNP T -> A AC=2;AN=190;BQB=0.994527;DP=4968;DP4=1895,2473,15,23;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.000402576;MQB=1.6734e-06;MQSB=1.40715e-05;RPB=0.680457;SGB=82.3989;VDB=0.0647951;EFF=SPLICE_SITE_DONOR(HIGH||||326|LOC_Os04g16924|protein_coding|CODING|LOC_Os04g16924.1|2|1),INTRON(MODIFIER||||326|LOC_Os04g16924|protein_coding|CODING|LOC_Os04g16924.1|2|1);LOF=(LOC_Os04g16924|LOC_Os04g16924|1|1.00) FN2235-S.SNP.4:9265553 chr04:009265553 0 W/9265553-9265553 FN2235-S SNP C -> A AC=1;AN=190;BQB=0.00971667;DP=4726;DP4=2651,1771,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68594e-09;MQSB=0.699606;RPB=0.988465;SGB=-36.7706;VDB=0.434617;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.4:9265771 chr04:009265771 0 W/9265771-9265771 FN229-S Single Base Substitution T-C INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2758-S.SNP.4:9273070 chr04:009273070 0 W/9273070-9273070 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.455291;DP=4875;DP4=2359,2268,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.98633e-18;MQSB=0.989924;RPB=0.759061;SGB=123.342;VDB=0.730468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.4:9274794 chr04:009274794 0 W/9274794-9274794 FN3709-S SNP T -> G AC=1;AN=190;BQB=0.929015;DP=3087;DP4=1678,1280,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17514e-07;MQSB=0.999583;RPB=0.74961;SGB=44.5415;VDB=0.483572;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.4:9276582 chr04:009276582 0 W/9276582-9276582 FN4041-S SNP T -> C AC=2;AN=168;BQB=0.929576;DP=2558;DP4=1283,1165,5,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.62374e-14;MQSB=0.678828;RPB=0.93377;SGB=46.4929;VDB=0.921933;EFF=INTRON(MODIFIER||||1707|LOC_Os04g16950|protein_coding|CODING|LOC_Os04g16950.1|1|1) FN-134.SNP.4:9277964 chr04:009277964 0 W/9277964-9277964 FN-134 Single Base Substitution T-C INTRON HOMO SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN424-S.SNP.4:9278356 chr04:009278356 0 W/9278356-9278356 FN424-S Single Base Substitution A-T INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2628-S.SNP.4:9280385 chr04:009280385 0 W/9280385-9280385 FN2628-S SNP G -> A AC=1;AN=200;BQB=0.818621;DP=4771;DP4=2357,2163,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.90223e-19;MQSB=0.990085;RPB=0.5354;SGB=97.9523;VDB=0.340835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A330T|1707|LOC_Os04g16950|protein_coding|CODING|LOC_Os04g16950.1|4|1) FN-216.SNP.4:9281694 chr04:009281694 0 W/9281694-9281694 FN-216 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g16950 retrotransposon protein, putative, unclassified, expressed SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN507-S.SNP.4:9284015 chr04:009284015 0 W/9284015-9284015 FN507-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g16950 retrotransposon protein, putative, unclassified, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN3451-S.SNP.4:9285371 chr04:009285371 0 W/9285371-9285371 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.964729;DP=3024;DP4=1733,1224,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66263e-05;MQSB=0.995526;RPB=0.973539;SGB=30.6558;VDB=0.50714;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.4:9291028 chr04:009291028 0 W/9291028-9291028 FN598-S Single Base Substitution T-C INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2323.SNP.4:9299198 chr04:009299198 0 W/9299198-9299198 FN2323 SNP C -> T AC=1;AN=192;BQB=0.287813;DP=4732;DP4=2164,2307,9,4;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00316991;MQB=0.00040709;MQSB=0.124759;RPB=0.967185;SGB=18.6565;VDB=0.919143;EFF=INTRON(MODIFIER||||858|LOC_Os04g16990|protein_coding|CODING|LOC_Os04g16990.1|1|1) FN2463.SNP.4:9301907 chr04:009301907 0 W/9301907-9301907 FN2463 SNP G -> A AC=1;AN=200;BQB=0.874987;DP=4566;DP4=1972,2294,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.33478e-08;MQSB=0.909782;RPB=0.978695;SGB=36.6644;VDB=0.406435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.4:9304176 chr04:009304176 0 W/9304176-9304176 FN3746-S SNP A -> C AC=2;AN=190;BQB=0.998825;DP=3242;DP4=1605,1504,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.06981e-15;MQSB=0.999045;RPB=0.0650868;SGB=126.511;VDB=0.0920385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.4:9304873 chr04:009304873 0 W/9304873-9304873 FN2794-S SNP C -> T AC=2;AN=198;BQB=0.276911;DP=3969;DP4=1815,1917,35,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.7055e-32;MQSB=0.51825;RPB=0.422831;SGB=246.324;VDB=0.0913958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.4:9309399 chr04:009309399 0 W/9309399-9309399 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.732083;DP=5225;DP4=2616,2306,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08289e-14;MQSB=0.610814;RPB=0.0215936;SGB=109.527;VDB=0.485596;EFF=INTRON(MODIFIER||||751|LOC_Os04g17010|protein_coding|CODING|LOC_Os04g17010.1|5|1) FN3707-S.SNP.4:9317432 chr04:009317432 0 W/9317432-9317432 FN3707-S SNP C -> G AC=1;AN=190;BQB=0.716222;DP=3124;DP4=1400,1570,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.17001e-05;MQSB=0.994547;RPB=0.971005;SGB=8.33661;VDB=0.856615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.4:9324587 chr04:009324587 0 W/9324587-9324587 FN4038-S SNP G -> T AC=1;AN=168;BQB=0.990684;DP=3646;DP4=1657,1850,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=15;MQ0F=0.431432;MQB=0.402094;MQSB=0;RPB=0.475678;SGB=109.773;VDB=0.906597;EFF=INTRON(MODIFIER||||1312|LOC_Os04g17020|protein_coding|CODING|LOC_Os04g17020.1|2|1) FN2579-S.SNP.4:9328806 chr04:009328806 0 W/9328806-9328806 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.804338;DP=3972;DP4=2016,1747,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00453172;MQB=2.73413e-07;MQSB=0.689171;RPB=0.994414;SGB=49.5489;VDB=0.518002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M6T|310|LOC_Os04g17030|protein_coding|CODING|LOC_Os04g17030.1|1|1) FN3359-S.SNP.4:9329273 chr04:009329273 0 W/9329273-9329273 FN3359-S SNP C -> T AC=2;AN=184;BQB=0.947472;DP=2748;DP4=1475,1151,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.55356e-17;MQSB=0.782544;RPB=0.767212;SGB=95.6183;VDB=0.683385;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.4:9333626 chr04:009333626 0 W/9333626-9333626 W416-6-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3809-S.SNP.4:9335188 chr04:009335188 0 W/9335188-9335188 FN3809-S SNP C -> T AC=1;AN=190;BQB=0.301833;DP=3297;DP4=1516,1643,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.13688e-06;MQSB=0.7999;RPB=0.813697;SGB=36.1006;VDB=0.208746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.4:9335531 chr04:009335531 0 W/9335531-9335531 FN3293-S SNP A -> G AC=1;AN=184;BQB=0.972643;DP=3449;DP4=1697,1542,16,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000579878;MQB=1.10505e-15;MQSB=0.910714;RPB=0.27689;SGB=61.1019;VDB=0.20577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.4:9335967 chr04:009335967 0 W/9335967-9335967 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.955668;DP=2901;DP4=1361,1403,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.6302e-13;MQSB=0.970344;RPB=0.190733;SGB=64.5316;VDB=0.293624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.4:9339972 chr04:009339972 0 W/9339972-9339972 FN2096-S SNP C -> T AC=2;AN=168;BQB=0.928478;DP=4179;DP4=2052,2059,28,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44091e-30;MQSB=0.999733;RPB=0.575883;SGB=62.8542;VDB=0.275815;EFF=INTRON(MODIFIER||||319|LOC_Os04g17050|protein_coding|CODING|LOC_Os04g17050.1|1|1) FN3434-S.SNP.4:9343696 chr04:009343696 0 W/9343696-9343696 FN3434-S SNP T -> C AC=1;AN=184;BQB=0.669;DP=2808;DP4=1263,1430,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000712251;MQB=0.000633585;MQSB=0.998809;RPB=0.920668;SGB=21.6609;VDB=0.377003;EFF=INTRON(MODIFIER||||319|LOC_Os04g17050|protein_coding|CODING|LOC_Os04g17050.1|4|1) FN-412.SNP.4:9357972 chr04:009357972 0 W/9357972-9357972 FN-412 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g17064 expressed protein SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN412-S.SNP.4:9357972 chr04:009357972 0 W/9357972-9357972 FN412-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g17064 expressed protein SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1438-S.SNP.4:9359976 chr04:009359976 0 W/9359976-9359976 FN1438-S Single Base Substitution A-G INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3987-S.SNP.4:9364798 chr04:009364798 0 W/9364798-9364798 FN3987-S SNP A -> G AC=2;AN=168;BQB=0.984829;DP=2078;DP4=1101,874,13,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.65332e-09;MQSB=2.65875e-07;RPB=0.689189;SGB=96.481;VDB=0.710396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.4:9374663 chr04:009374663 0 W/9374663-9374663 FN2454 SNP C -> T AC=1;AN=200;BQB=0.65557;DP=4634;DP4=2281,2108,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46685e-08;MQSB=0.986098;RPB=0.550228;SGB=-35.7104;VDB=0.982949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.4:9383677 chr04:009383677 0 W/9383677-9383677 FN2200-S SNP C -> T AC=2;AN=190;BQB=0.904998;DP=4638;DP4=2152,2196,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.29906e-12;MQSB=0.910902;RPB=0.874166;SGB=56.8601;VDB=0.764196;EFF=INTRON(MODIFIER||||1510|LOC_Os04g17130|protein_coding|CODING|LOC_Os04g17130.1|12|1) FN2080-S.SNP.4:9384298 chr04:009384298 0 W/9384298-9384298 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.0998103;DP=4218;DP4=2207,1965,16,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.63742e-11;MQSB=0.976425;RPB=0.767442;SGB=-74.3449;VDB=0.329859;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L1330|1510|LOC_Os04g17130|protein_coding|CODING|LOC_Os04g17130.1|9|1) FN2080-S.SNP.4:9384299 chr04:009384299 0 W/9384299-9384299 FN2080-S SNP A -> C AC=1;AN=168;BQB=0.59627;DP=4219;DP4=2192,1986,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.88346e-11;MQSB=0.982301;RPB=0.4127;SGB=15.6372;VDB=0.150287;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtG|V1329|1510|LOC_Os04g17130|protein_coding|CODING|LOC_Os04g17130.1|9|1) FN3912-S.SNP.4:9384854 chr04:009384854 0 W/9384854-9384854 FN3912-S SNP A -> G AC=1;AN=158;BQB=0.89638;DP=2391;DP4=1116,1148,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.29221e-07;MQSB=0.989509;RPB=0.0828943;SGB=14.3409;VDB=0.065806;EFF=INTRON(MODIFIER||||1510|LOC_Os04g17130|protein_coding|CODING|LOC_Os04g17130.1|8|1) FN2599-S.SNP.4:9392478 chr04:009392478 0 W/9392478-9392478 FN2599-S SNP C -> G AC=1;AN=198;BQB=0.235644;DP=4289;DP4=2148,1869,18,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07386e-15;MQSB=0.633641;RPB=0.951561;SGB=79.6954;VDB=0.754376;EFF=INTRON(MODIFIER||||1510|LOC_Os04g17130|protein_coding|CODING|LOC_Os04g17130.1|1|1) FN-215.SNP.4:9394683 chr04:009394683 0 W/9394683-9394683 FN-215 Single Base Substitution G-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-215.SNP.4:9394693 chr04:009394693 0 W/9394693-9394693 FN-215 Single Base Substitution T-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN806-S.SNP.4:9396359 chr04:009396359 0 W/9396359-9396359 FN806-S Single Base Substitution G-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3095-S.SNP.4:9399637 chr04:009399637 0 W/9399637-9399637 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.86638;DP=2751;DP4=1186,1483,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81575e-09;MQSB=0.991872;RPB=0.999297;SGB=53.3568;VDB=0.685519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A550T|781|LOC_Os04g17140|protein_coding|CODING|LOC_Os04g17140.1|2|1) FN3915-S.SNP.4:9400552 chr04:009400552 0 W/9400552-9400552 FN3915-S SNP G -> A AC=1;AN=158;BQB=0.733946;DP=2351;DP4=1140,1132,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000650778;MQSB=0.997837;RPB=0.980926;SGB=7.23273;VDB=0.871535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.4:9402747 chr04:009402747 0 W/9402747-9402747 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.985616;DP=4806;DP4=2377,2199,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.77905e-15;MQSB=0.99398;RPB=0.578952;SGB=50.3263;VDB=0.918714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.4:9405193 chr04:009405193 0 W/9405193-9405193 FN1266-S Single Base Substitution G-C INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN1022-S.SNP.4:9408180 chr04:009408180 0 W/9408180-9408180 FN1022-S Single Base Substitution A-G INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2752-S.SNP.4:9411765 chr04:009411765 0 W/9411765-9411765 FN2752-S SNP G -> A AC=2;AN=200;BQB=0.656012;DP=4720;DP4=2076,2407,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.60651e-20;MQSB=0.872739;RPB=0.529782;SGB=112.373;VDB=0.675366;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.4:9413804 chr04:009413804 0 W/9413804-9413804 FN1209-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN489-S.SNP.4:9422951 chr04:009422951 0 W/9422951-9422951 FN489-S Single Base Substitution G-T INTRON HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN-198.SNP.4:9423316 chr04:009423316 0 W/9423316-9423316 FN-198 Single Base Substitution G-A INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-109.SNP.4:9431695 chr04:009431695 0 W/9431695-9431695 FN-109 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g17190 transposon protein, putative, Mutator sub-class, expressed SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN1501-S.SNP.4:9431740 chr04:009431740 0 W/9431740-9431740 FN1501-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g17190 transposon protein, putative, Mutator sub-class, expressed SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2160-S.SNP.4:9434623 chr04:009434623 0 W/9434623-9434623 FN2160-S SNP G -> T AC=1;AN=168;BQB=0.247716;DP=4017;DP4=1752,2205,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.69072e-14;MQSB=0.878572;RPB=0.905518;SGB=-44.0584;VDB=0.290537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3888-S.SNP.4:9437324 chr04:009437324 0 W/9437324-9437324 FN3888-S SNP C -> T AC=1;AN=158;BQB=0.951709;DP=2407;DP4=1122,1194,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.16991e-10;MQSB=0.832211;RPB=0.843391;SGB=60.1755;VDB=0.291385;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L377|499|LOC_Os04g17210|protein_coding|CODING|LOC_Os04g17210.1|2|1) FN2749-S.SNP.4:9438294 chr04:009438294 0 W/9438294-9438294 FN2749-S SNP G -> T AC=1;AN=200;BQB=0.611787;DP=5084;DP4=2383,2451,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51146e-08;MQSB=0.799187;RPB=0.967066;SGB=36.6644;VDB=0.716573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.4:9439873 chr04:009439873 0 W/9439873-9439873 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.960855;DP=3735;DP4=1450,2179,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78084e-12;MQSB=0.978505;RPB=0.99529;SGB=93.9603;VDB=0.202157;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.4:9441550 chr04:009441550 0 W/9441550-9441550 FN558-S Single Base Substitution C-T INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3401-S.SNP.4:9444454 chr04:009444454 0 W/9444454-9444454 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.157104;DP=2769;DP4=1195,1500,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00167798;MQSB=0.9335;RPB=0.568862;SGB=25.1826;VDB=0.117011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.4:9445444 chr04:009445444 0 W/9445444-9445444 FN-362 Single Base Substitution C-T INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2753-S.SNP.4:9449393 chr04:009449393 0 W/9449393-9449393 FN2753-S SNP C -> G AC=1;AN=200;BQB=0.0875459;DP=3500;DP4=1199,1812,10,17;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.234286;MQB=0.862549;MQSB=0;RPB=0.999996;SGB=-7.6637;VDB=0.416352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.4:9457831 chr04:009457831 0 W/9457831-9457831 FN-95 Single Base Substitution T-C INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1220-S.SNP.4:9457831 chr04:009457831 0 W/9457831-9457831 FN1220-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN3851-S.SNP.4:9466966 chr04:009466966 0 W/9466966-9466966 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.998651;DP=2638;DP4=1342,1225,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0576194;MQB=0.519492;MQSB=0.0478063;RPB=0.896181;SGB=55.806;VDB=0.460669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P1162S|1992|LOC_Os04g17260|protein_coding|CODING|LOC_Os04g17260.1|3|1) FN2740-S.SNP.4:9476105 chr04:009476105 0 W/9476105-9476105 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.710813;DP=4830;DP4=2254,2266,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19569e-08;MQSB=0.523232;RPB=0.898997;SGB=65.5058;VDB=0.841231;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N242|653|LOC_Os04g17280|protein_coding|CODING|LOC_Os04g17280.1|3|1) FN3807-S.SNP.4:9476506 chr04:009476506 0 W/9476506-9476506 FN3807-S SNP T -> C AC=1;AN=190;BQB=0.995477;DP=2747;DP4=1387,1226,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.09891e-09;MQSB=0.789339;RPB=0.880969;SGB=58.2031;VDB=0.752013;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y147C|653|LOC_Os04g17280|protein_coding|CODING|LOC_Os04g17280.1|2|1) FN756-S.SNP.4:9476856 chr04:009476856 0 W/9476856-9476856 FN756-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2782-S.SNP.4:9477843 chr04:009477843 0 W/9477843-9477843 FN2782-S SNP C -> A AC=1;AN=198;BQB=0.0844842;DP=1793;DP4=311,1339,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.010039;MQB=0.0218192;MQSB=0.112428;RPB=0.906683;SGB=63.3342;VDB=0.395459;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.4:9483071 chr04:009483071 0 W/9483071-9483071 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.884455;DP=2995;DP4=1414,1465,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.00924e-06;MQSB=0.799703;RPB=0.416405;SGB=58.2031;VDB=0.0829221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.4:9483807 chr04:009483807 0 W/9483807-9483807 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.615131;DP=2461;DP4=1126,1194,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00121902;MQB=0.000497801;MQSB=0.543052;RPB=0.812104;SGB=15.9981;VDB=0.856747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.4:9486611 chr04:009486611 0 W/9486611-9486611 FN2171-S SNP T -> C AC=2;AN=168;BQB=0.956818;DP=2762;DP4=1706,1001,13,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.62604e-11;MQSB=0.172355;RPB=0.68478;SGB=46.4929;VDB=0.345793;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.4:9487972 chr04:009487972 0 W/9487972-9487972 FN1392-S Single Base Substitution T-C INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3723-S.SNP.4:9488160 chr04:009488160 0 W/9488160-9488160 FN3723-S SNP A -> G AC=1;AN=190;BQB=0.754976;DP=2944;DP4=1395,1397,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.179008;MQB=0.111424;MQSB=0;RPB=0.996652;SGB=8.77275;VDB=0.933613;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.4:9488790 chr04:009488790 0 W/9488790-9488790 FN4235-S SNP A -> G AC=1;AN=170;BQB=0.958436;DP=2591;DP4=1354,1168,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00733308;MQB=7.3104e-05;MQSB=0.568688;RPB=0.998607;SGB=52.3148;VDB=0.866996;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N154D|1620|LOC_Os04g17320|protein_coding|CODING|LOC_Os04g17320.1|1|1) FN1271-S.SNP.4:9503032 chr04:009503032 0 W/9503032-9503032 FN1271-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1326-S.SNP.4:9508444 chr04:009508444 0 W/9508444-9508444 FN1326-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g17360 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN452-S.SNP.4:9508444 chr04:009508444 0 W/9508444-9508444 FN452-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g17360 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN469-S.SNP.4:9509337 chr04:009509337 0 W/9509337-9509337 FN469-S Single Base Substitution T-C INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN-189.SNP.4:9513447 chr04:009513447 0 W/9513447-9513447 FN-189 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g17370 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1453-S.SNP.4:9516698 chr04:009516698 0 W/9516698-9516698 FN1453-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g17390 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1339-S.SNP.4:9519152 chr04:009519152 0 W/9519152-9519152 FN1339-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g17400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN833-S.SNP.4:9529891 chr04:009529891 0 W/9529891-9529891 FN833-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN833-S.SNP.4:9529901 chr04:009529901 0 W/9529901-9529901 FN833-S Single Base Substitution C-T START_LOST HET LOC_Os04g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN-141.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN-141 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-218.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN-218 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2205-S.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN2205-S SNP C -> T AC=2;AN=190;BQB=0.703321;DP=3907;DP4=1787,1854,25,17;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0568211;MQB=0.000186444;MQSB=0.23678;RPB=0.870506;SGB=185.712;VDB=0.740165;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V991|1030|LOC_Os04g17430|protein_coding|CODING|LOC_Os04g17430.1|2|1) FN497-S.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN497-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN531-S.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN531-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN598-S.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN598-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN895-S.SNP.4:9537826 chr04:009537826 0 W/9537826-9537826 FN895-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN4229-S.SNP.4:9543030 chr04:009543030 0 W/9543030-9543030 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.91377;DP=2839;DP4=1268,1499,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.00634026;MQB=0.229224;MQSB=0.0116374;RPB=0.982353;SGB=43.4296;VDB=0.776548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S566N|2030|LOC_Os04g17440|protein_coding|CODING|LOC_Os04g17440.1|1|1) FN2536-S.SNP.4:9546186 chr04:009546186 0 W/9546186-9546186 FN2536-S SNP T -> C AC=1;AN=198;BQB=0.344724;DP=3732;DP4=1974,1571,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00107181;MQB=0.00144392;MQSB=0.753535;RPB=0.691335;SGB=14.9842;VDB=0.96193;EFF=INTRON(MODIFIER||||358|LOC_Os04g17450|protein_coding|CODING|LOC_Os04g17450.1|1|1) FN1536-S.SNP.4:9546690 chr04:009546690 0 W/9546690-9546690 FN1536-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g17450 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN671-S.SNP.4:9557051 chr04:009557051 0 W/9557051-9557051 FN671-S Single Base Substitution G-C INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1333-S.SNP.4:9559332 chr04:009559332 0 W/9559332-9559332 FN1333-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1097-S.SNP.4:9566565 chr04:009566565 0 W/9566565-9566565 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2180-S.SNP.4:9568775 chr04:009568775 0 W/9568775-9568775 FN2180-S SNP T -> C AC=1;AN=190;BQB=0.759521;DP=4618;DP4=2169,2245,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77278e-06;MQSB=0.943986;RPB=0.939286;SGB=35.4339;VDB=0.0795038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.4:9575987 chr04:009575987 0 W/9575987-9575987 FN2477 SNP T -> C AC=1;AN=200;BQB=0.317696;DP=5695;DP4=3234,2167,22,15;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.230729;MQB=0.148784;MQSB=0;RPB=0.901915;SGB=164.789;VDB=0.727154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I426M|1342|LOC_Os04g17500|protein_coding|CODING|LOC_Os04g17500.1|1|1) FN927-S.SNP.4:9584821 chr04:009584821 0 W/9584821-9584821 FN927-S Single Base Substitution G-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN4204-S.SNP.4:9590341 chr04:009590341 0 W/9590341-9590341 FN4204-S SNP T -> C AC=1;AN=170;BQB=0.741829;DP=2022;DP4=1065,835,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000742214;MQSB=0.699986;RPB=0.903188;SGB=7.67082;VDB=0.0462669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.4:9594148 chr04:009594148 0 W/9594148-9594148 FN1480-S Single Base Substitution T-A INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN-412.SNP.4:9608063 chr04:009608063 0 W/9608063-9608063 FN-412 Single Base Substitution A-G INTERGENIC HOMO SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN412-S.SNP.4:9608063 chr04:009608063 0 W/9608063-9608063 FN412-S Single Base Substitution A-G INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN-240.SNP.4:9612102 chr04:009612102 0 W/9612102-9612102 FN-240 Single Base Substitution A-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2575-S.SNP.4:9612349 chr04:009612349 0 W/9612349-9612349 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.998851;DP=3673;DP4=1768,1587,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.25596e-11;MQSB=0.991352;RPB=0.998991;SGB=72.5051;VDB=0.722133;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.4:9612683 chr04:009612683 0 W/9612683-9612683 FN414-S Single Base Substitution G-A INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2614-S.SNP.4:9613778 chr04:009613778 0 W/9613778-9613778 FN2614-S SNP T -> C AC=2;AN=198;BQB=0.578422;DP=4364;DP4=2172,1921,26,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.41635e-25;MQSB=0.991592;RPB=0.620087;SGB=210.378;VDB=0.874649;EFF=INTERGENIC(MODIFIER||||||||||1) FN-45.SNP.4:9615858 chr04:009615858 0 W/9615858-9615858 FN-45 Single Base Substitution T-A SYNONYMOUS_CODING Homo SNo: 45, Mutant_ID: FN-45, Generation: M2, Mutations: 30, Genes: 47, Seed availability: Yes. FN628-S.SNP.4:9616705 chr04:009616705 0 W/9616705-9616705 FN628-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g17600 retrotransposon, putative, centromere-specific, expressed SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN628-S.SNP.4:9617010 chr04:009617010 0 W/9617010-9617010 FN628-S Single Base Substitution T-G INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-278.SNP.4:9617658 chr04:009617658 0 W/9617658-9617658 FN-278 Single Base Substitution T-G INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN577-S.SNP.4:9619718 chr04:009619718 0 W/9619718-9619718 FN577-S Single Base Substitution G-T INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1631-S.SNP.4:9624138 chr04:009624138 0 W/9624138-9624138 FN1631-S Single Base Substitution T-A INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-102.SNP.4:9626315 chr04:009626315 0 W/9626315-9626315 FN-102 Single Base Substitution G-A INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2483.SNP.4:9626315 chr04:009626315 0 W/9626315-9626315 FN2483 SNP G -> A AC=2;AN=200;BQB=0.109861;DP=4241;DP4=1946,2094,20,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.28183e-18;MQSB=0.994167;RPB=0.677009;SGB=137.158;VDB=0.172708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.4:9626315 chr04:009626315 0 W/9626315-9626315 FN2785-S SNP G -> A AC=2;AN=198;BQB=0.907675;DP=4006;DP4=1836,1968,22,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.76746e-20;MQSB=0.789587;RPB=0.356014;SGB=115.647;VDB=0.785735;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.4:9626315 chr04:009626315 0 W/9626315-9626315 FN3877-S SNP G -> A AC=2;AN=158;BQB=0.995972;DP=2329;DP4=1048,1189,13,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.30209e-15;MQSB=0.999867;RPB=0.729071;SGB=116.978;VDB=0.436506;EFF=INTERGENIC(MODIFIER||||||||||1) FN1726-S.SNP.4:9627780 chr04:009627780 0 W/9627780-9627780 FN1726-S SNP C -> T AC=1;AN=188;BQB=0.394245;DP=3288;DP4=1623,1627,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02675e-10;MQSB=0.896709;RPB=0.982311;SGB=-40.5615;VDB=0.362479;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.4:9631447 chr04:009631447 0 W/9631447-9631447 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.880689;DP=2531;DP4=1257,1185,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33839e-11;MQSB=0.914425;RPB=0.999993;SGB=33.2965;VDB=0.633915;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T55|518|LOC_Os04g17610|protein_coding|CODING|LOC_Os04g17610.1|2|1) FN1461-S.SNP.4:9632953 chr04:009632953 0 W/9632953-9632953 FN1461-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g17610 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN373-S.SNP.4:9636856 chr04:009636856 0 W/9636856-9636856 FN373-S Single Base Substitution G-A INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2337.SNP.4:9638072 chr04:009638072 0 W/9638072-9638072 FN2337 SNP G -> A AC=1;AN=192;BQB=0.777794;DP=4294;DP4=2035,1733,10,3;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00163018;MQB=9.84858e-07;MQSB=0.868172;RPB=0.578092;SGB=53.7748;VDB=0.120512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.4:9638578 chr04:009638578 0 W/9638578-9638578 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.993653;DP=2905;DP4=1279,1506,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0433735;MQB=0.882931;MQSB=0.00145667;RPB=0.856541;SGB=-0.806606;VDB=0.376268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.4:9641948 chr04:009641948 0 W/9641948-9641948 FN1109-S Single Base Substitution A-T INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4146-S.SNP.4:9652326 chr04:009652326 0 W/9652326-9652326 FN4146-S SNP C -> T AC=1;AN=170;BQB=0.464425;DP=2412;DP4=1245,1083,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.53927e-06;MQSB=0.24467;RPB=0.588125;SGB=70.0854;VDB=0.305515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.4:9652348 chr04:009652348 0 W/9652348-9652348 FN3987-S SNP C -> T AC=2;AN=168;BQB=0.78916;DP=2576;DP4=1409,1024,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.64009e-17;MQSB=0.035748;RPB=0.081779;SGB=82.9551;VDB=0.577228;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.4:9653600 chr04:009653600 0 W/9653600-9653600 FN4173-S SNP A -> G AC=1;AN=170;BQB=0.898741;DP=2573;DP4=1292,1211,3,11;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0116595;MQB=0.000893213;MQSB=0.543562;RPB=0.526823;SGB=56.7575;VDB=0.462635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.4:9654766 chr04:009654766 0 W/9654766-9654766 FN2715-S SNP A -> C AC=1;AN=200;BQB=0.751855;DP=4703;DP4=2368,2096,14,4;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0531576;MQB=1;MQSB=0.0790578;RPB=0.799136;SGB=77.2904;VDB=0.965622;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.4:9655638 chr04:009655638 0 W/9655638-9655638 FN-402 Single Base Substitution A-G INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN4141-S.SNP.4:9658943 chr04:009658943 0 W/9658943-9658943 FN4141-S SNP T -> A AC=1;AN=170;BQB=0.985107;DP=2683;DP4=1227,1377,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00819978;MQB=0.00110757;MQSB=0.0455635;RPB=0.998117;SGB=74.528;VDB=0.960421;EFF=INTRON(MODIFIER||||852|LOC_Os04g17640|protein_coding|CODING|LOC_Os04g17640.1|4|1) FN2535-S.SNP.4:9660456 chr04:009660456 0 W/9660456-9660456 FN2535-S SNP G -> C AC=1;AN=198;BQB=0.41573;DP=5865;DP4=2514,3094,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0380222;MQB=0.00083585;MQSB=0.342284;RPB=0.788231;SGB=-11.4553;VDB=0.723464;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G780R|852|LOC_Os04g17640|protein_coding|CODING|LOC_Os04g17640.1|7|1) FN3499-S.SNP.4:9667818 chr04:009667818 0 W/9667818-9667818 FN3499-S SNP C -> T AC=1;AN=188;BQB=0.128753;DP=2781;DP4=1267,1410,3,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000115003;MQSB=0.20505;RPB=0.984621;SGB=20.9896;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.4:9669753 chr04:009669753 0 W/9669753-9669753 FN1520-S Single Base Substitution C-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN425-S.SNP.4:9671104 chr04:009671104 0 W/9671104-9671104 FN425-S Single Base Substitution A-G INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN4253-S.SNP.4:9681165 chr04:009681165 0 W/9681165-9681165 FN4253-S SNP C -> T AC=1;AN=170;BQB=0.818444;DP=2219;DP4=1018,1145,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.41222e-05;MQSB=0.999953;RPB=0.724301;SGB=21.1076;VDB=0.984625;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.4:9682311 chr04:009682311 0 W/9682311-9682311 FN3613-S SNP A -> T AC=2;AN=190;BQB=0.997347;DP=3196;DP4=1571,1346,19,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.21802e-22;MQSB=0.978419;RPB=0.998884;SGB=100.276;VDB=0.631828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.4:9686144 chr04:009686144 0 W/9686144-9686144 FN-176 Single Base Substitution C-T INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2278-S.SNP.4:9691953 chr04:009691953 0 W/9691953-9691953 FN2278-S SNP A -> C AC=1;AN=190;BQB=0.995951;DP=2816;DP4=2111,515,11,0;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0024858;MQB=0.00573256;MQSB=5.57717e-43;RPB=0.595446;SGB=28.9929;VDB=0.647932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.4:9694800 chr04:009694800 0 W/9694800-9694800 FN3423-S SNP C -> A AC=1;AN=184;BQB=0.709178;DP=3244;DP4=1443,1695,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0610358;MQB=0.73707;MQSB=0.000558594;RPB=0.874047;SGB=25.1826;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.4:9695965 chr04:009695965 0 W/9695965-9695965 FN3425-S SNP C -> T AC=1;AN=184;BQB=0.903721;DP=3276;DP4=1837,1320,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.08647e-09;MQSB=0.675411;RPB=0.935103;SGB=84.9167;VDB=0.0192733;EFF=INTRON(MODIFIER||||276|LOC_Os04g17700|protein_coding|CODING|LOC_Os04g17700.1|3|1) FN-63.SNP.4:9698839 chr04:009698839 0 W/9698839-9698839 FN-63 Single Base Substitution A-G INTRON HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2385.SNP.4:9701313 chr04:009701313 0 W/9701313-9701313 FN2385 SNP C -> G AC=1;AN=192;BQB=0.74267;DP=4833;DP4=2108,2399,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0235878;MQB=0.417801;MQSB=1.24245e-06;RPB=0.970151;SGB=54.5574;VDB=0.513426;EFF=INTRON(MODIFIER||||276|LOC_Os04g17700|protein_coding|CODING|LOC_Os04g17700.1|4|1) FN2385.SNP.4:9701314 chr04:009701314 0 W/9701314-9701314 FN2385 SNP C -> T AC=1;AN=192;BQB=0.625399;DP=4828;DP4=2067,2415,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.0244408;MQB=0.814873;MQSB=8.33635e-07;RPB=0.949157;SGB=-41.8626;VDB=0.289166;EFF=INTRON(MODIFIER||||276|LOC_Os04g17700|protein_coding|CODING|LOC_Os04g17700.1|4|1) FN1058-S.SNP.4:9703297 chr04:009703297 0 W/9703297-9703297 FN1058-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g17700 kinesin heavy chain isolog, putative, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1492-S.SNP.4:9704362 chr04:009704362 0 W/9704362-9704362 FN1492-S Single Base Substitution A-G INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN3332-S.SNP.4:9714549 chr04:009714549 0 W/9714549-9714549 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.526735;DP=3527;DP4=1628,1762,10,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9163e-12;MQSB=0.902198;RPB=0.999841;SGB=53.5365;VDB=0.703226;EFF=INTRON(MODIFIER||||74|LOC_Os04g17730|protein_coding|CODING|LOC_Os04g17730.1|2|1) FN4260-S.SNP.4:9716908 chr04:009716908 0 W/9716908-9716908 FN4260-S SNP T -> C AC=1;AN=170;BQB=0.651486;DP=2548;DP4=1145,1332,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.37661e-10;MQSB=0.999173;RPB=0.57591;SGB=8.66042;VDB=0.342534;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.4:9721460 chr04:009721460 0 W/9721460-9721460 FN4160-S SNP A -> T AC=2;AN=170;BQB=0.99835;DP=2367;DP4=965,1331,4,10;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.114913;MQB=0.0546525;MQSB=2.53353e-08;RPB=0.999742;SGB=56.7575;VDB=0.746499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N268Y|322|LOC_Os04g17740|protein_coding|CODING|LOC_Os04g17740.1|2|1) FN4176-S.SNP.4:9734243 chr04:009734243 0 W/9734243-9734243 FN4176-S SNP C -> T AC=1;AN=170;BQB=0.990681;DP=2253;DP4=1310,888,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.011984;MQB=0.38883;MQSB=3.50803e-08;RPB=0.571738;SGB=61.2001;VDB=0.134913;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.4:9737289 chr04:009737289 0 W/9737289-9737289 FN691-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g17770 transposon protein, putative, unclassified, expressed SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2331.SNP.4:9738778 chr04:009738778 0 W/9738778-9738778 FN2331 SNP C -> G AC=2;AN=192;BQB=0.0110061;DP=5226;DP4=2638,2192,24,20;HOB=0.0206163;ICB=0.494846;MQ=23;MQ0F=0.110218;MQB=0.256447;MQSB=0;RPB=0.287799;SGB=-96.0852;VDB=0.0123758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.4:9741525 chr04:009741525 0 W/9741525-9741525 FN1442-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2581-S.SNP.4:9749771 chr04:009749771 0 W/9749771-9749771 FN2581-S SNP C -> T AC=1;AN=198;BQB=0.973394;DP=3759;DP4=1925,1631,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000266028;MQB=2.40087e-07;MQSB=0.908965;RPB=0.594945;SGB=44.9538;VDB=0.337964;EFF=INTRON(MODIFIER||||620|LOC_Os04g17789|protein_coding|CODING|LOC_Os04g17789.1|2|1) FN1459-S.SNP.4:9750169 chr04:009750169 0 W/9750169-9750169 FN1459-S Single Base Substitution A-G INTRON HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN3889-S.SNP.4:9750436 chr04:009750436 0 W/9750436-9750436 FN3889-S SNP T -> C AC=1;AN=158;BQB=0.971213;DP=4580;DP4=2873,1484,14,16;HOB=8.01154e-05;ICB=0.000161245;MQ=17;MQ0F=0.511572;MQB=0.0574305;MQSB=0;RPB=0.799809;SGB=56.991;VDB=0.809467;EFF=INTRON(MODIFIER||||620|LOC_Os04g17789|protein_coding|CODING|LOC_Os04g17789.1|2|1) FN3915-S.SNP.4:9754840 chr04:009754840 0 W/9754840-9754840 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.889056;DP=2497;DP4=1078,1329,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.87089e-05;MQSB=0.0617676;RPB=0.834878;SGB=51.4366;VDB=0.79047;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.4:9755681 chr04:009755681 0 W/9755681-9755681 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1557-S.SNP.4:9756003 chr04:009756003 0 W/9756003-9756003 FN1557-S Single Base Substitution G-A INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3758-S.SNP.4:9756003 chr04:009756003 0 W/9756003-9756003 FN3758-S SNP G -> A AC=1;AN=190;BQB=0.999677;DP=3021;DP4=1800,1088,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.40293e-08;MQSB=0.773307;RPB=0.702451;SGB=58.2031;VDB=0.281337;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.4:9756003 chr04:009756003 0 W/9756003-9756003 FN548-S Single Base Substitution G-A INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN756-S.SNP.4:9756003 chr04:009756003 0 W/9756003-9756003 FN756-S Single Base Substitution G-A INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN1319-S.SNP.4:9757040 chr04:009757040 0 W/9757040-9757040 FN1319-S Single Base Substitution A-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2113-S.SNP.4:9757427 chr04:009757427 0 W/9757427-9757427 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.142378;DP=3513;DP4=1876,1590,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29006e-06;MQSB=0.992755;RPB=0.429172;SGB=29.4772;VDB=0.395559;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.4:9757830 chr04:009757830 0 W/9757830-9757830 FN4043-S SNP T -> G AC=2;AN=168;BQB=0.0227093;DP=3047;DP4=1454,1239,15,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000656383;MQB=7.1525e-10;MQSB=0.913388;RPB=0.880072;SGB=-268.611;VDB=0.999363;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.4:9757833 chr04:009757833 0 W/9757833-9757833 FN4043-S SNP G -> C AC=2;AN=168;BQB=0.627802;DP=3063;DP4=1535,1241,5,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000652955;MQB=3.49086e-07;MQSB=0.993048;RPB=0.120247;SGB=-34.9514;VDB=0.589161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.4:9761440 chr04:009761440 0 W/9761440-9761440 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.999933;DP=3642;DP4=1858,1643,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00631521;MQB=4.03933e-05;MQSB=0.637229;RPB=0.163711;SGB=66.8296;VDB=0.654918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.4:9762349 chr04:009762349 0 W/9762349-9762349 FN2758-S SNP C -> G AC=1;AN=200;BQB=0.23542;DP=4359;DP4=2028,1795,21,9;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.109658;MQB=0.556192;MQSB=0;RPB=0.165501;SGB=-144.249;VDB=0.293155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.4:9762681 chr04:009762681 0 W/9762681-9762681 FN3692-S SNP A -> G AC=1;AN=190;BQB=0.193421;DP=3127;DP4=1442,1407,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.116406;MQB=0.894459;MQSB=0.429813;RPB=0.764042;SGB=8.77275;VDB=0.829013;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.4:9762905 chr04:009762905 0 W/9762905-9762905 FN2411 SNP T -> C AC=1;AN=200;BQB=0.985327;DP=4500;DP4=1991,2149,10,12;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0555556;MQB=0.755731;MQSB=0;RPB=0.909316;SGB=69.1109;VDB=0.71803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.4:9763165 chr04:009763165 0 W/9763165-9763165 FN2372 SNP A -> G AC=1;AN=192;BQB=0.938607;DP=4489;DP4=2040,2056,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000891067;MQB=3.84302e-07;MQSB=0.97539;RPB=0.935518;SGB=71.8591;VDB=0.918306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.4:9770136 chr04:009770136 0 W/9770136-9770136 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.869087;DP=2991;DP4=1314,1552,14,18;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00668673;MQB=0.0748935;MQSB=0.0311655;RPB=0.384218;SGB=103.624;VDB=0.388347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P343S|455|LOC_Os04g17820|protein_coding|CODING|LOC_Os04g17820.1|2|1) FN4230-S.SNP.4:9773559 chr04:009773559 0 W/9773559-9773559 FN4230-S SNP T -> C AC=1;AN=170;BQB=0.517033;DP=2871;DP4=1259,1264,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0215953;MQB=0.899056;MQSB=0.211089;RPB=0.990448;SGB=24.7692;VDB=0.158387;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.4:9774406 chr04:009774406 0 W/9774406-9774406 FN463-S Single Base Substitution G-T INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN3964-S.SNP.4:9779073 chr04:009779073 0 W/9779073-9779073 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.627866;DP=3134;DP4=1546,1302,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00765795;MQB=0.000172488;MQSB=6.27098e-26;RPB=0.0956233;SGB=-92.9238;VDB=0.655525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.4:9803328 chr04:009803328 0 W/9803328-9803328 FN1465-S Single Base Substitution C-T INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN-396.SNP.4:9803407 chr04:009803407 0 W/9803407-9803407 FN-396 Single Base Substitution C-G INTERGENIC HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2231-S.SNP.4:9810818 chr04:009810818 0 W/9810818-9810818 FN2231-S SNP C -> T AC=2;AN=190;BQB=0.193321;DP=4055;DP4=1960,1691,12,17;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0387176;MQB=0.21;MQSB=0.826164;RPB=0.715011;SGB=126.511;VDB=0.103744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.4:9834965 chr04:009834965 0 W/9834965-9834965 FN2444 SNP C -> T AC=1;AN=200;BQB=0.853842;DP=4434;DP4=2070,2076,11,20;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.0139829;MQB=0.559784;MQSB=7.98267e-35;RPB=0.982761;SGB=101.557;VDB=0.410128;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L886F|1514|LOC_Os04g17890|protein_coding|CODING|LOC_Os04g17890.1|6|1) FN3639-S.SNP.4:9836321 chr04:009836321 0 W/9836321-9836321 FN3639-S SNP G -> C AC=1;AN=190;BQB=0.835765;DP=2952;DP4=1356,1468,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.129743;MQB=0.655385;MQSB=1.0589e-14;RPB=0.979154;SGB=49.0954;VDB=0.0383199;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V1298L|1514|LOC_Os04g17890|protein_coding|CODING|LOC_Os04g17890.1|7|1) FN2421.SNP.4:9839635 chr04:009839635 0 W/9839635-9839635 FN2421 SNP T -> A AC=1;AN=200;BQB=0.996128;DP=3289;DP4=1446,1597,3,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000608088;MQB=0.0342448;MQSB=0.000841002;RPB=0.622343;SGB=15.0344;VDB=0.750734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.4:9854981 chr04:009854981 0 W/9854981-9854981 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.275124;DP=4839;DP4=2282,2325,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78857e-12;MQSB=0.163187;RPB=0.967181;SGB=37.3004;VDB=0.83182;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.4:9858129 chr04:009858129 0 W/9858129-9858129 FN_831-4-1 Single Base Substitution C-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2740-S.SNP.4:9860881 chr04:009860881 0 W/9860881-9860881 FN2740-S SNP C -> G AC=1;AN=200;BQB=0.623137;DP=6381;DP4=3759,2375,13,18;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=1.11003e-05;MQSB=0;RPB=0.556645;SGB=65.9573;VDB=0.646457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.4:9861351 chr04:009861351 0 W/9861351-9861351 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.967302;DP=4745;DP4=2395,2056,16,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.742e-13;MQSB=0.255391;RPB=0.980372;SGB=22.3313;VDB=0.66215;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.4:9861677 chr04:009861677 0 W/9861677-9861677 FN618-S Single Base Substitution C-A INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1371-S.SNP.4:9870856 chr04:009870856 0 W/9870856-9870856 FN1371-S Single Base Substitution C-G INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2378.SNP.4:9871927 chr04:009871927 0 W/9871927-9871927 FN2378 SNP C -> T AC=1;AN=192;BQB=0.584799;DP=4966;DP4=2219,2453,14,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.75843e-15;MQSB=0.921007;RPB=0.994767;SGB=69.9435;VDB=0.924191;EFF=INTRON(MODIFIER||||267|LOC_Os04g17950|protein_coding|CODING|LOC_Os04g17950.1|1|1) FN1006-S.SNP.4:9879894 chr04:009879894 0 W/9879894-9879894 FN1006-S Single Base Substitution G-C INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1012-S.SNP.4:9881032 chr04:009881032 0 W/9881032-9881032 FN1012-S Single Base Substitution G-T INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-406.SNP.4:9890865 chr04:009890865 0 W/9890865-9890865 FN-406 Single Base Substitution G-A UTR_3_PRIME HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-406.SNP.4:9890866 chr04:009890866 0 W/9890866-9890866 FN-406 Single Base Substitution C-T UTR_3_PRIME HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN3353-S.SNP.4:9894099 chr04:009894099 0 W/9894099-9894099 FN3353-S SNP A -> G AC=1;AN=184;BQB=0.804318;DP=2672;DP4=1252,1307,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.13225e-08;MQSB=0.986801;RPB=0.931786;SGB=75.8731;VDB=0.582227;EFF=UTR_3_PRIME(MODIFIER||5425||509|LOC_Os04g18010|protein_coding|CODING|LOC_Os04g18010.1|24|1) FN421-S.SNP.4:9895755 chr04:009895755 0 W/9895755-9895755 FN421-S Single Base Substitution C-T INTRON HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2114-S.SNP.4:9896132 chr04:009896132 0 W/9896132-9896132 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.0726006;DP=4118;DP4=1690,2398,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.15091e-06;MQSB=0.996517;RPB=0.0749495;SGB=-80.0779;VDB=0.351155;EFF=INTRON(MODIFIER||||509|LOC_Os04g18010|protein_coding|CODING|LOC_Os04g18010.1|23|1) FN369-S.SNP.4:9898730 chr04:009898730 0 W/9898730-9898730 FN369-S Single Base Substitution A-G INTRON HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3064-S.SNP.4:9898957 chr04:009898957 0 W/9898957-9898957 FN3064-S SNP C -> A AC=2;AN=184;BQB=0.883095;DP=2700;DP4=1107,1496,9,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.45408e-11;MQSB=0.972066;RPB=0.306635;SGB=80.3949;VDB=0.80953;EFF=INTRON(MODIFIER||||509|LOC_Os04g18010|protein_coding|CODING|LOC_Os04g18010.1|21|1) FN900-S.SNP.4:9917214 chr04:009917214 0 W/9917214-9917214 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN2221-S.SNP.4:9918106 chr04:009918106 0 W/9918106-9918106 FN2221-S SNP T -> A AC=1;AN=190;BQB=0.979184;DP=4748;DP4=2219,2229,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00042123;MQB=6.30393e-14;MQSB=0.0871221;RPB=0.83803;SGB=112.85;VDB=0.105174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.4:9927598 chr04:009927598 0 W/9927598-9927598 FN3039-S SNP C -> T AC=2;AN=184;BQB=0.980854;DP=3855;DP4=1856,1854,24,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.90715e-28;MQSB=0.931498;RPB=0.547863;SGB=216.049;VDB=0.261451;EFF=START_GAINED(LOW||||430|LOC_Os04g18020|protein_coding|CODING|LOC_Os04g18020.1|1|1),UTR_5_PRIME(MODIFIER||579||430|LOC_Os04g18020|protein_coding|CODING|LOC_Os04g18020.1|1|1) FN3455-S.SNP.4:9931153 chr04:009931153 0 W/9931153-9931153 FN3455-S SNP T -> C AC=1;AN=184;BQB=0.987516;DP=3265;DP4=1628,1475,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75933e-08;MQSB=0.991484;RPB=0.97957;SGB=66.8296;VDB=0.578992;EFF=UTR_3_PRIME(MODIFIER||1684||430|LOC_Os04g18020|protein_coding|CODING|LOC_Os04g18020.1|1|1) FN3552-S.SNP.4:9937422 chr04:009937422 0 W/9937422-9937422 FN3552-S SNP C -> A AC=1;AN=188;BQB=0.983301;DP=2895;DP4=1542,1287,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.92144e-10;MQSB=0.626713;RPB=0.976264;SGB=76.2387;VDB=0.620886;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:9938035 chr04:009938035 0 W/9938035-9938035 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.543523;DP=4883;DP4=2361,2230,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204792;MQB=2.16405e-13;MQSB=0.415684;RPB=0.996425;SGB=47.7211;VDB=0.970769;EFF=INTERGENIC(MODIFIER||||||||||1) FN-80.SNP.4:9944752 chr04:009944752 0 W/9944752-9944752 FN-80 Single Base Substitution A-G INTRON HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN2322.SNP.4:9958561 chr04:009958561 0 W/9958561-9958561 FN2322 SNP T -> A AC=2;AN=192;BQB=0.213083;DP=4694;DP4=2106,2229,21,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.83163e-19;MQSB=0.71536;RPB=0.997795;SGB=75.0722;VDB=0.571272;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.4:9961686 chr04:009961686 0 W/9961686-9961686 FN737-S Single Base Substitution C-T INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN737-S.SNP.4:9961688 chr04:009961688 0 W/9961688-9961688 FN737-S Single Base Substitution G-A INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN1643-S.SNP.4:9968070 chr04:009968070 0 W/9968070-9968070 FN1643-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1014-S.SNP.4:9969432 chr04:009969432 0 W/9969432-9969432 FN1014-S Single Base Substitution G-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN3839-S.SNP.4:9974697 chr04:009974697 0 W/9974697-9974697 FN3839-S SNP G -> C AC=1;AN=190;BQB=0.977234;DP=2610;DP4=1348,1189,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.73173e-05;MQSB=0.923874;RPB=0.528268;SGB=26.3271;VDB=0.903975;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.4:9988340 chr04:009988340 0 W/9988340-9988340 FN946-S Single Base Substitution G-A INTERGENIC HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2721-S.SNP.4:9988345 chr04:009988345 0 W/9988345-9988345 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.775803;DP=3974;DP4=1824,1741,7,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00578762;MQB=0.0261137;MQSB=6.37778e-05;RPB=0.716629;SGB=21.6694;VDB=0.086377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.4:9991215 chr04:009991215 0 W/9991215-9991215 FN1241-S Single Base Substitution C-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2202-S.SNP.4:9995531 chr04:009995531 0 W/9995531-9995531 FN2202-S SNP A -> G AC=1;AN=190;BQB=0.762178;DP=5147;DP4=2454,2294,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36528e-05;MQSB=0.969164;RPB=0.995649;SGB=-17.0991;VDB=0.233838;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.4:10002490 chr04:010002490 0 W/10002490-10002490 FN523-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.4:10002490 chr04:010002490 0 W/10002490-10002490 FN532-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN751-S.SNP.4:10003955 chr04:010003955 0 W/10003955-10003955 FN751-S Single Base Substitution C-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3818-S.SNP.4:10014078 chr04:010014078 0 W/10014078-10014078 FN3818-S SNP G -> T AC=1;AN=190;BQB=0.992419;DP=3439;DP4=2119,1218,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=10;MQ0F=0.593777;MQB=0.012269;MQSB=0;RPB=0.165505;SGB=99.1879;VDB=0.588417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.4:10018900 chr04:010018900 0 W/10018900-10018900 FN1236-S Single Base Substitution C-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN4188-S.SNP.4:10029014 chr04:010029014 0 W/10029014-10029014 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.972546;DP=2292;DP4=1054,1164,5,14;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0078534;MQB=3.70067e-07;MQSB=0.964621;RPB=0.420636;SGB=78.9707;VDB=0.627504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N89D|592|LOC_Os04g18140|protein_coding|CODING|LOC_Os04g18140.1|2|1) FN3665-S.SNP.4:10029379 chr04:010029379 0 W/10029379-10029379 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.925294;DP=2981;DP4=1478,1368,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0721234;MQB=0.388358;MQSB=6.66783e-25;RPB=0.828861;SGB=103.624;VDB=0.939157;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L210|592|LOC_Os04g18140|protein_coding|CODING|LOC_Os04g18140.1|2|1) FN1458-S.SNP.4:10030843 chr04:010030843 0 W/10030843-10030843 FN1458-S Single Base Substitution C-T INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3446-S.SNP.4:10035687 chr04:010035687 0 W/10035687-10035687 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.989211;DP=2893;DP4=1529,1292,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.12637e-09;MQSB=0.92783;RPB=0.997881;SGB=57.786;VDB=0.0606881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N40D|843|LOC_Os04g18160|protein_coding|CODING|LOC_Os04g18160.1|1|1) FN2252-S.SNP.4:10044147 chr04:010044147 0 W/10044147-10044147 FN2252-S SNP C -> A AC=1;AN=190;BQB=0.0542807;DP=5069;DP4=2461,2052,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197278;MQB=7.25486e-07;MQSB=0.992928;RPB=0.998341;SGB=-37.2167;VDB=0.951997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.4:10044660 chr04:010044660 0 W/10044660-10044660 FN1170-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g18170 retrotransposon protein, putative, unclassified SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. W23-2-1.SNP.4:10045126 chr04:010045126 0 W/10045126-10045126 W23-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN403-S.SNP.4:10046589 chr04:010046589 0 W/10046589-10046589 FN403-S Single Base Substitution T-C INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN320-S.SNP.4:10049301 chr04:010049301 0 W/10049301-10049301 FN320-S Single Base Substitution C-T INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN4241-S.SNP.4:10050193 chr04:010050193 0 W/10050193-10050193 FN4241-S SNP C -> G AC=1;AN=170;BQB=0.920315;DP=2482;DP4=1292,1103,16,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.78718e-13;MQSB=0.780617;RPB=0.580391;SGB=96.7413;VDB=0.264391;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.4:10051991 chr04:010051991 0 W/10051991-10051991 FN838-S Single Base Substitution C-G INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2403.SNP.4:10057175 chr04:010057175 0 W/10057175-10057175 FN2403 SNP G -> A AC=1;AN=200;BQB=0.778552;DP=4538;DP4=2118,2086,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220361;MQB=1.26534e-08;MQSB=0.92532;RPB=0.48489;SGB=24.2746;VDB=0.542796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.4:10061202 chr04:010061202 0 W/10061202-10061202 FN1080-S Single Base Substitution C-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN961-S.SNP.4:10066927 chr04:010066927 0 W/10066927-10066927 FN961-S Single Base Substitution A-G INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-153.SNP.4:10072709 chr04:010072709 0 W/10072709-10072709 FN-153 Single Base Substitution A-G INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2117-S.SNP.4:10072840 chr04:010072840 0 W/10072840-10072840 FN2117-S SNP A -> G AC=1;AN=168;BQB=0.00110575;DP=4228;DP4=2494,1696,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.59424e-05;MQSB=0.952638;RPB=0.30418;SGB=-141.204;VDB=0.310805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.4:10079951 chr04:010079951 0 W/10079951-10079951 FN2177-S SNP C -> A AC=1;AN=168;BQB=0.113025;DP=1619;DP4=588,983,2,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.74837e-05;MQSB=0.601946;RPB=0.657158;SGB=14.8923;VDB=0.49785;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.4:10086870 chr04:010086870 0 W/10086870-10086870 FN934-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g18244 retrotransposon protein, putative, unclassified, expressed SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1547-S.SNP.4:10093070 chr04:010093070 0 W/10093070-10093070 FN1547-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g18244 retrotransposon protein, putative, unclassified, expressed SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN1547-S.SNP.4:10093071 chr04:010093071 0 W/10093071-10093071 FN1547-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN1613-S.SNP.4:10102565 chr04:010102565 0 W/10102565-10102565 FN1613-S Single Base Substitution T-C INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN2440.SNP.4:10108036 chr04:010108036 0 W/10108036-10108036 FN2440 SNP C -> T AC=1;AN=200;BQB=0.999327;DP=4846;DP4=2042,2465,13,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00392076;MQB=3.99315e-08;MQSB=0.132611;RPB=0.996041;SGB=61.9006;VDB=0.988896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.4:10117931 chr04:010117931 0 W/10117931-10117931 FN2591-S SNP A -> T AC=2;AN=198;BQB=0.633148;DP=4343;DP4=2065,2034,18,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.3415e-13;MQSB=0.864177;RPB=0.742686;SGB=20.5152;VDB=0.377938;EFF=INTRON(MODIFIER||||1376|LOC_Os04g18330|protein_coding|CODING|LOC_Os04g18330.1|5|1) FN3535-S.SNP.4:10120957 chr04:010120957 0 W/10120957-10120957 FN3535-S SNP A -> C AC=1;AN=188;BQB=0.641391;DP=2773;DP4=1340,1343,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.90677e-07;MQSB=0.863924;RPB=0.998918;SGB=43.0708;VDB=0.39454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1155T|1376|LOC_Os04g18330|protein_coding|CODING|LOC_Os04g18330.1|9|1) FN1327-S.SNP.4:10122523 chr04:010122523 0 W/10122523-10122523 FN1327-S Single Base Substitution G-A INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. 704-3.SNP.4:10130908 chr04:010130908 0 W/10130908-10130908 704-3 Single Base Substitution A-C INTERGENIC Homo SNo: 1457, Mutant_ID: 704-3, Generation: M2, Mutations: 21, Genes: 8, Seed availability: Yes. FN1340-S.SNP.4:10132283 chr04:010132283 0 W/10132283-10132283 FN1340-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g18360 retrotransposon protein, putative, unclassified, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3312-S.SNP.4:10134864 chr04:010134864 0 W/10134864-10134864 FN3312-S SNP G -> T AC=1;AN=184;BQB=0.563145;DP=3847;DP4=1875,1841,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.26917e-06;MQSB=0.808981;RPB=0.302716;SGB=57.786;VDB=0.0784785;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I177|410|LOC_Os04g18360|protein_coding|CODING|LOC_Os04g18360.1|2|1) FN1212-S.SNP.4:10136687 chr04:010136687 0 W/10136687-10136687 FN1212-S Single Base Substitution C-A INTRON HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3363-S.SNP.4:10140370 chr04:010140370 0 W/10140370-10140370 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.997918;DP=3109;DP4=1517,1494,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.59997e-07;MQSB=0.0527483;RPB=0.557309;SGB=57.786;VDB=0.103932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.4:10142493 chr04:010142493 0 W/10142493-10142493 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.498186;DP=2968;DP4=1319,1516,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00303235;MQB=0.000122565;MQSB=0.999177;RPB=0.908852;SGB=66.8296;VDB=0.0544027;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.4:10142660 chr04:010142660 0 W/10142660-10142660 FN4138-S SNP G -> T AC=1;AN=170;BQB=0.561632;DP=1785;DP4=731,987,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000116879;MQSB=0.734417;RPB=0.986067;SGB=43.4296;VDB=0.504358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.4:10143065 chr04:010143065 0 W/10143065-10143065 FN1519-S Single Base Substitution G-A INTERGENIC Homo SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2412.SNP.4:10145304 chr04:010145304 0 W/10145304-10145304 FN2412 SNP C -> A AC=1;AN=200;BQB=0.209345;DP=4025;DP4=2016,1686,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03766e-12;MQSB=0.918817;RPB=0.891192;SGB=37.3004;VDB=0.25676;EFF=INTRON(MODIFIER||||618|LOC_Os04g18380|protein_coding|CODING|LOC_Os04g18380.1|1|1) FN1209-S.SNP.4:10146879 chr04:010146879 0 W/10146879-10146879 FN1209-S Single Base Substitution G-A INTRON HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN-375.SNP.4:10158900 chr04:010158900 0 W/10158900-10158900 FN-375 Single Base Substitution C-T INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN4202-S.SNP.4:10160248 chr04:010160248 0 W/10160248-10160248 FN4202-S SNP G -> A AC=1;AN=170;BQB=0.855483;DP=2699;DP4=1296,1324,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.026306;MQB=0.033375;MQSB=0.44318;RPB=0.986595;SGB=14.9986;VDB=0.941134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G178S|1002|LOC_Os04g18400|protein_coding|CODING|LOC_Os04g18400.1|2|1) FN3372-S.SNP.4:10161613 chr04:010161613 0 W/10161613-10161613 FN3372-S SNP T -> A AC=1;AN=184;BQB=0.933801;DP=2975;DP4=1491,1375,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0117647;MQB=0.00744861;MQSB=0.336584;RPB=0.887857;SGB=71.3514;VDB=0.552277;EFF=INTRON(MODIFIER||||1002|LOC_Os04g18400|protein_coding|CODING|LOC_Os04g18400.1|2|1) FN436-S.SNP.4:10162995 chr04:010162995 0 W/10162995-10162995 FN436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g18400 retrotransposon protein, putative, unclassified, expressed SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN436-S.SNP.4:10162996 chr04:010162996 0 W/10162996-10162996 FN436-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g18400 retrotransposon protein, putative, unclassified, expressed SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2795-S.SNP.4:10166406 chr04:010166406 0 W/10166406-10166406 FN2795-S SNP C -> G AC=1;AN=198;BQB=0.934552;DP=3888;DP4=1918,1741,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00257202;MQB=0.00144857;MQSB=0.00899125;RPB=0.878163;SGB=35.7638;VDB=0.219792;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A158G|2027|LOC_Os04g18410|protein_coding|CODING|LOC_Os04g18410.1|1|1) FN2797-S.SNP.4:10167231 chr04:010167231 0 W/10167231-10167231 FN2797-S SNP C -> G AC=1;AN=198;BQB=0.746683;DP=3982;DP4=1488,2264,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.106228;MQB=0.915651;MQSB=0.000228474;RPB=0.894231;SGB=36.5539;VDB=0.0301552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T433S|2027|LOC_Os04g18410|protein_coding|CODING|LOC_Os04g18410.1|1|1) FN2629-S.SNP.4:10179950 chr04:010179950 0 W/10179950-10179950 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.989457;DP=4780;DP4=2072,2426,10,12;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0041841;MQB=8.96476e-05;MQSB=1.11472e-15;RPB=0.916361;SGB=95.7111;VDB=0.428985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.4:10180678 chr04:010180678 0 W/10180678-10180678 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.997174;DP=3953;DP4=1944,1882,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0164432;MQB=0.021847;MQSB=8.31474e-06;RPB=0.755794;SGB=39.2697;VDB=0.113622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.4:10185762 chr04:010185762 0 W/10185762-10185762 FN3917-S SNP G -> A AC=1;AN=158;BQB=0.991409;DP=3141;DP4=1390,1642,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.59087e-08;MQSB=0.932078;RPB=0.468799;SGB=34.0735;VDB=0.0481314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.4:10188365 chr04:010188365 0 W/10188365-10188365 FN2581-S SNP G -> A AC=1;AN=198;BQB=0.987087;DP=3931;DP4=1767,1952,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.27423e-06;MQSB=0.991722;RPB=0.861158;SGB=13.7737;VDB=0.319127;EFF=INTRON(MODIFIER||||266|LOC_Os04g18450|protein_coding|CODING|LOC_Os04g18450.1|1|1) FN3925-S.SNP.4:10190340 chr04:010190340 0 W/10190340-10190340 FN3925-S SNP A -> C AC=1;AN=158;BQB=0.98926;DP=2648;DP4=1242,1249,16,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.02571e-13;MQSB=0.327529;RPB=0.695332;SGB=121.348;VDB=0.755791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.4:10191396 chr04:010191396 0 W/10191396-10191396 FN2698-S SNP C -> A AC=1;AN=200;BQB=0.888041;DP=4994;DP4=2389,2339,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76206e-19;MQSB=0.966146;RPB=0.698448;SGB=71.1676;VDB=0.0554832;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.4:10192884 chr04:010192884 0 W/10192884-10192884 FN3512-S SNP G -> A AC=2;AN=188;BQB=0.990047;DP=3278;DP4=919,2225,5,18;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.0384381;MQB=2.54076e-05;MQSB=0;RPB=0.310386;SGB=98.9552;VDB=0.171865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.4:10192885 chr04:010192885 0 W/10192885-10192885 FN3512-S SNP A -> C AC=2;AN=188;BQB=0.995888;DP=3286;DP4=908,2057,6,26;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.034084;MQB=1.50433e-05;MQSB=0;RPB=0.79648;SGB=-42.845;VDB=0.693425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.4:10193667 chr04:010193667 0 W/10193667-10193667 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.908253;DP=2950;DP4=1581,1275,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0179661;MQB=0.00400306;MQSB=0.624665;RPB=0.953657;SGB=71.3514;VDB=0.825351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P1693S|1752|LOC_Os04g18460|protein_coding|CODING|LOC_Os04g18460.1|4|1) FN3390-S.SNP.4:10198185 chr04:010198185 0 W/10198185-10198185 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.885273;DP=4264;DP4=2735,1392,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.263133;MQB=0.344603;MQSB=0;RPB=0.990087;SGB=107.526;VDB=0.344992;EFF=INTRON(MODIFIER||||1752|LOC_Os04g18460|protein_coding|CODING|LOC_Os04g18460.1|2|1) FN1422-S.SNP.4:10201046 chr04:010201046 0 W/10201046-10201046 FN1422-S Single Base Substitution G-A INTERGENIC Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1445-S.SNP.4:10201204 chr04:010201204 0 W/10201204-10201204 FN1445-S Single Base Substitution C-T INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2592-S.SNP.4:10201204 chr04:010201204 0 W/10201204-10201204 FN2592-S SNP C -> T AC=1;AN=198;BQB=0.116525;DP=3660;DP4=1713,1606,14,22;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0352459;MQB=1.54921e-10;MQSB=0.959014;RPB=0.160467;SGB=-489.609;VDB=0.0266612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.4:10202162 chr04:010202162 0 W/10202162-10202162 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.00286956;DP=2683;DP4=1418,756,15,3;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0227357;MQB=0.0102214;MQSB=0.242255;RPB=0.617123;SGB=-14.1922;VDB=0.436022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.4:10209059 chr04:010209059 0 W/10209059-10209059 FN1731-S SNP A -> G AC=1;AN=188;BQB=0.999151;DP=3535;DP4=1254,2239,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.81583e-09;MQSB=0.00205019;RPB=0.917942;SGB=16.3413;VDB=0.758696;EFF=INTRON(MODIFIER||||758|LOC_Os04g18470|protein_coding|CODING|LOC_Os04g18470.1|8|1) FN3661-S.SNP.4:10210939 chr04:010210939 0 W/10210939-10210939 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.911151;DP=2916;DP4=1520,1267,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.03955e-09;MQSB=0.988039;RPB=0.743693;SGB=53.6492;VDB=0.665058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.4:10217317 chr04:010217317 0 W/10217317-10217317 FN2366 SNP G -> A AC=2;AN=192;BQB=0.273715;DP=4361;DP4=2532,1580,23,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.91159e-19;MQSB=0.874706;RPB=0.685765;SGB=118.196;VDB=0.820191;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1262*|1308|LOC_Os04g18480|protein_coding|CODING|LOC_Os04g18480.1|6|1) FN3676-S.SNP.4:10218549 chr04:010218549 0 W/10218549-10218549 FN3676-S SNP G -> A AC=2;AN=190;BQB=0.923522;DP=2160;DP4=1030,991,4,9;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0180556;MQB=0.00631079;MQSB=0.809423;RPB=0.918567;SGB=53.6492;VDB=0.975445;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.4:10218997 chr04:010218997 0 W/10218997-10218997 FN4037-S SNP T -> C AC=1;AN=168;BQB=0.893451;DP=3197;DP4=1456,1607,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0284642;MQB=0.00506877;MQSB=2.73759e-22;RPB=0.812137;SGB=55.3328;VDB=0.3792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.4:10222230 chr04:010222230 0 W/10222230-10222230 FN1008-S Single Base Substitution C-T INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN708-S.SNP.4:10223902 chr04:010223902 0 W/10223902-10223902 FN708-S Single Base Substitution G-A INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4137-S.SNP.4:10226829 chr04:010226829 0 W/10226829-10226829 FN4137-S SNP G -> A AC=1;AN=170;BQB=0.957811;DP=2235;DP4=1104,1088,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000140443;MQSB=0.0861851;RPB=0.912103;SGB=38.987;VDB=0.717542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R242Q|1470|LOC_Os04g18500|protein_coding|CODING|LOC_Os04g18500.1|1|1) FN4235-S.SNP.4:10227088 chr04:010227088 0 W/10227088-10227088 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.983419;DP=2393;DP4=1263,1071,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.054743;MQB=0.254683;MQSB=3.53252e-36;RPB=0.999494;SGB=47.8722;VDB=0.798635;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R328|1470|LOC_Os04g18500|protein_coding|CODING|LOC_Os04g18500.1|1|1) FN1158-S.SNP.4:10227603 chr04:010227603 0 W/10227603-10227603 FN1158-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g18500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN833-S.SNP.4:10227818 chr04:010227818 0 W/10227818-10227818 FN833-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g18500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN833-S.SNP.4:10227819 chr04:010227819 0 W/10227819-10227819 FN833-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g18500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1154-S.SNP.4:10253124 chr04:010253124 0 W/10253124-10253124 FN1154-S Single Base Substitution T-C INTRON HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN3562-S.SNP.4:10264900 chr04:010264900 0 W/10264900-10264900 FN3562-S SNP C -> T AC=1;AN=188;BQB=0.903501;DP=2676;DP4=1203,1401,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.72681e-07;MQSB=0.655256;RPB=0.691565;SGB=53.7007;VDB=0.136708;EFF=INTRON(MODIFIER||||618|LOC_Os04g18580|protein_coding|CODING|LOC_Os04g18580.1|3|1) FN-125.SNP.4:10267240 chr04:010267240 0 W/10267240-10267240 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2164-S.SNP.4:10267495 chr04:010267495 0 W/10267495-10267495 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.286411;DP=938;DP4=307,569,2,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.71221e-05;MQSB=0.990632;RPB=0.808144;SGB=31.3172;VDB=0.101691;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.4:10268270 chr04:010268270 0 W/10268270-10268270 FN863-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN229-S.SNP.4:10270969 chr04:010270969 0 W/10270969-10270969 FN229-S Single Base Substitution G-C INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN4065-S.SNP.4:10270970 chr04:010270970 0 W/10270970-10270970 FN4065-S SNP G -> T AC=1;AN=168;BQB=0.0618101;DP=3101;DP4=1274,1466,176,7;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.0964205;MQB=0;MQSB=0;RPB=5.28518e-06;SGB=-2023.75;VDB=0.00604913;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.4:10275190 chr04:010275190 0 W/10275190-10275190 FN711-S Single Base Substitution T-A INTRON HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2164-S.SNP.4:10286253 chr04:010286253 0 W/10286253-10286253 FN2164-S SNP G -> T AC=1;AN=168;BQB=0.000173097;DP=3234;DP4=1267,1926,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.000309215;MQB=0.54819;MQSB=7.50565e-25;RPB=0.898255;SGB=-172.198;VDB=0.969461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.4:10288344 chr04:010288344 0 W/10288344-10288344 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.2521;DP=3338;DP4=1580,1628,15,4;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.107549;MQB=0.475477;MQSB=2.20747e-32;RPB=0.687836;SGB=9.8459;VDB=0.201574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.4:10292766 chr04:010292766 0 W/10292766-10292766 FN1034-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g18610 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN1739-S.SNP.4:10292766 chr04:010292766 0 W/10292766-10292766 FN1739-S SNP G -> A AC=2;AN=188;BQB=0.0259635;DP=2967;DP4=1496,1422,18,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.33256e-12;MQSB=0.993977;RPB=0.999849;SGB=-155.916;VDB=0.453511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G205D|685|LOC_Os04g18610|protein_coding|CODING|LOC_Os04g18610.1|3|1) FN2179-S.SNP.4:10292766 chr04:010292766 0 W/10292766-10292766 FN2179-S SNP G -> A AC=1;AN=168;BQB=0.478102;DP=3477;DP4=1737,1703,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.61554e-08;MQSB=0.873482;RPB=0.762483;SGB=4.1907;VDB=0.372154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G205D|685|LOC_Os04g18610|protein_coding|CODING|LOC_Os04g18610.1|3|1) FN2531-S.SNP.4:10292766 chr04:010292766 0 W/10292766-10292766 FN2531-S SNP G -> A AC=2;AN=198;BQB=0.992385;DP=4383;DP4=2000,2142,19,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.21045e-26;MQSB=0.998869;RPB=0.835401;SGB=196.593;VDB=0.12404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G205D|685|LOC_Os04g18610|protein_coding|CODING|LOC_Os04g18610.1|3|1) FN3966-S.SNP.4:10296154 chr04:010296154 0 W/10296154-10296154 FN3966-S SNP G -> A AC=1;AN=168;BQB=0.919288;DP=2488;DP4=1215,1177,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.9964e-08;MQSB=0.986093;RPB=0.988984;SGB=31.3172;VDB=0.738266;EFF=INTRON(MODIFIER||||706|LOC_Os04g18620|protein_coding|CODING|LOC_Os04g18620.1|5|1) FN961-S.SNP.4:10300837 chr04:010300837 0 W/10300837-10300837 FN961-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2139-S.SNP.4:10301197 chr04:010301197 0 W/10301197-10301197 FN2139-S SNP G -> C AC=1;AN=168;BQB=0.0903551;DP=2712;DP4=1237,1426,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0516224;MQB=0.0142327;MQSB=0.578316;RPB=0.290581;SGB=-15.8033;VDB=0.962183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Gcc|P101A|143|LOC_Os04g18630|protein_coding|CODING|LOC_Os04g18630.1|1|1) FN2136-S.SNP.4:10303822 chr04:010303822 0 W/10303822-10303822 FN2136-S SNP C -> G AC=2;AN=168;BQB=0.0244727;DP=3342;DP4=1504,1768,22,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000299222;MQB=5.3031e-25;MQSB=0.977268;RPB=0.785468;SGB=57.1309;VDB=0.997151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q669H|970|LOC_Os04g18640|protein_coding|CODING|LOC_Os04g18640.1|6|1) FN2620-S.SNP.4:10311771 chr04:010311771 0 W/10311771-10311771 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.933772;DP=4006;DP4=2032,1640,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.48413e-13;MQSB=0.789689;RPB=0.750744;SGB=79.6954;VDB=0.512022;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.4:10313341 chr04:010313341 0 W/10313341-10313341 FN890-S Single Base Substitution T-C INTERGENIC HOMO SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2275-S.SNP.4:10313619 chr04:010313619 0 W/10313619-10313619 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.990669;DP=4940;DP4=2181,2319,25,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20965e-26;MQSB=0.912255;RPB=0.841541;SGB=110.492;VDB=0.191133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.4:10315771 chr04:010315771 0 W/10315771-10315771 FN-151 Single Base Substitution G-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN4305-S.SNP.4:10319099 chr04:010319099 0 W/10319099-10319099 FN4305-S SNP C -> A AC=2;AN=170;BQB=0.998484;DP=2269;DP4=1054,1121,13,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.34773e-17;MQSB=0.844864;RPB=0.9674;SGB=123.397;VDB=0.556914;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.4:10329247 chr04:010329247 0 W/10329247-10329247 FN854-S Single Base Substitution G-A INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN475-S.SNP.4:10329885 chr04:010329885 0 W/10329885-10329885 FN475-S Single Base Substitution G-A INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2381.SNP.4:10331655 chr04:010331655 0 W/10331655-10331655 FN2381 SNP G -> A AC=1;AN=192;BQB=0.690604;DP=4718;DP4=2320,2026,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000423908;MQB=1.37918e-12;MQSB=0.116363;RPB=0.82955;SGB=21.4339;VDB=0.067115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.4:10338587 chr04:010338587 0 W/10338587-10338587 FN3890-S SNP G -> A AC=2;AN=158;BQB=0.740796;DP=1821;DP4=938,780,15,17;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=3.13212e-14;MQSB=0.0532014;RPB=0.747663;SGB=134.456;VDB=0.923095;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.4:10345128 chr04:010345128 0 W/10345128-10345128 FN1309-S Single Base Substitution C-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4189-S.SNP.4:10347778 chr04:010347778 0 W/10347778-10347778 FN4189-S SNP A -> T AC=1;AN=170;BQB=0.856507;DP=3171;DP4=1854,1184,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=26;MQ0F=0.175654;MQB=0.577908;MQSB=0;RPB=0.702016;SGB=34.878;VDB=0.223892;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.4:10350048 chr04:010350048 0 W/10350048-10350048 FN824-S Single Base Substitution C-G INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN415-S.SNP.4:10355102 chr04:010355102 0 W/10355102-10355102 FN415-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3821-S.SNP.4:10357024 chr04:010357024 0 W/10357024-10357024 FN3821-S SNP C -> A AC=1;AN=190;BQB=0.429753;DP=3161;DP4=1404,1670,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72542e-05;MQSB=0.983076;RPB=0.99737;SGB=28.9929;VDB=0.942301;EFF=INTRON(MODIFIER||||834|LOC_Os04g18690|protein_coding|CODING|LOC_Os04g18690.1|10|1) FN373-S.SNP.4:10361641 chr04:010361641 0 W/10361641-10361641 FN373-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3976-S.SNP.4:10362002 chr04:010362002 0 W/10362002-10362002 FN3976-S SNP G -> A AC=2;AN=168;BQB=0.238135;DP=2532;DP4=1260,1168,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00118483;MQB=1.92954e-10;MQSB=0.987833;RPB=0.842361;SGB=109.773;VDB=0.899714;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y903|1854|LOC_Os04g18700|protein_coding|CODING|LOC_Os04g18700.1|7|1) FN1227-S.SNP.4:10363423 chr04:010363423 0 W/10363423-10363423 FN1227-S Single Base Substitution A-C INTRON HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2268-S.SNP.4:10363856 chr04:010363856 0 W/10363856-10363856 FN2268-S SNP C -> T AC=2;AN=190;BQB=0.821375;DP=5359;DP4=2551,2430,47,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000186602;MQB=2.08976e-41;MQSB=0.964533;RPB=0.950011;SGB=274.788;VDB=0.591523;EFF=INTRON(MODIFIER||||1854|LOC_Os04g18700|protein_coding|CODING|LOC_Os04g18700.1|4|1) FN807-S.SNP.4:10364203 chr04:010364203 0 W/10364203-10364203 FN807-S Single Base Substitution G-A INTRON HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2625-S.SNP.4:10365050 chr04:010365050 0 W/10365050-10365050 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.974853;DP=4903;DP4=2294,2342,15,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.09659e-19;MQSB=0.658096;RPB=0.866296;SGB=101.557;VDB=0.776201;EFF=INTRON(MODIFIER||||1854|LOC_Os04g18700|protein_coding|CODING|LOC_Os04g18700.1|4|1) FN2530-S.SNP.4:10365844 chr04:010365844 0 W/10365844-10365844 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.542431;DP=4027;DP4=1759,1969,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0240874;MQB=0.0002312;MQSB=0.0215148;RPB=0.840927;SGB=54.5295;VDB=0.137493;EFF=INTRON(MODIFIER||||1854|LOC_Os04g18700|protein_coding|CODING|LOC_Os04g18700.1|2|1) FN3721-S.SNP.4:10367959 chr04:010367959 0 W/10367959-10367959 FN3721-S SNP T -> C AC=1;AN=190;BQB=0.65788;DP=3927;DP4=1756,2002,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.195824;MQB=0.143202;MQSB=0;RPB=0.673712;SGB=78.7471;VDB=0.268556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.4:10376462 chr04:010376462 0 W/10376462-10376462 FN1572-S Single Base Substitution A-G INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1272-S.SNP.4:10384185 chr04:010384185 0 W/10384185-10384185 FN1272-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN317-S.SNP.4:10394394 chr04:010394394 0 W/10394394-10394394 FN317-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g18730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. W475-4-2.SNP.4:10395534 chr04:010395534 0 W/10395534-10395534 W475-4-2 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN2139-S.SNP.4:10396847 chr04:010396847 0 W/10396847-10396847 FN2139-S SNP G -> T AC=1;AN=168;BQB=0.689477;DP=3521;DP4=1609,1850,21,21;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=2.1206e-12;MQSB=0.0881035;RPB=0.954773;SGB=41.3919;VDB=0.264129;EFF=INTRON(MODIFIER||||1413|LOC_Os04g18730|protein_coding|CODING|LOC_Os04g18730.1|8|1) FN1261-S.SNP.4:10403710 chr04:010403710 0 W/10403710-10403710 FN1261-S Single Base Substitution A-T STOP_GAINED HET LOC_Os04g18750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2598-S.SNP.4:10413410 chr04:010413410 0 W/10413410-10413410 FN2598-S SNP A -> T AC=2;AN=198;BQB=0.824115;DP=4089;DP4=1925,1930,18,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.41737e-20;MQSB=0.974217;RPB=0.995688;SGB=169.022;VDB=0.501955;EFF=INTRON(MODIFIER||||1963|LOC_Os04g18750|protein_coding|CODING|LOC_Os04g18750.1|1|1) FN1686-S.SNP.4:10416415 chr04:010416415 0 W/10416415-10416415 FN1686-S SNP G -> C AC=1;AN=188;BQB=2.92868e-05;DP=2389;DP4=1163,1180,13,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.67716e-05;MQSB=0.609532;RPB=0.643458;SGB=-506.214;VDB=0.935479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.4:10426458 chr04:010426458 0 W/10426458-10426458 FN1452-S Single Base Substitution G-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN-211.SNP.4:10427201 chr04:010427201 0 W/10427201-10427201 FN-211 Single Base Substitution C-T INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-117.SNP.4:10429411 chr04:010429411 0 W/10429411-10429411 FN-117 Single Base Substitution G-C INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN884-S.SNP.4:10430105 chr04:010430105 0 W/10430105-10430105 FN884-S Single Base Substitution G-T INTERGENIC HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1037-S.SNP.4:10430228 chr04:010430228 0 W/10430228-10430228 FN1037-S Single Base Substitution G-T INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN980-S.SNP.4:10431059 chr04:010431059 0 W/10431059-10431059 FN980-S Single Base Substitution C-T INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2104-S.SNP.4:10432207 chr04:010432207 0 W/10432207-10432207 FN2104-S SNP G -> A AC=1;AN=168;BQB=0.781499;DP=3106;DP4=1581,1483,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000321958;MQB=0.000319483;MQSB=4.17172e-13;RPB=0.975835;SGB=-0.101747;VDB=0.276712;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.4:10438485 chr04:010438485 0 W/10438485-10438485 FN3559-S SNP C -> G AC=1;AN=188;BQB=0.999733;DP=6494;DP4=3455,2909,24,16;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00862334;MQB=2.20785e-16;MQSB=0.164635;RPB=0.68656;SGB=131.653;VDB=0.253711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D931E|1549|LOC_Os04g18770|protein_coding|CODING|LOC_Os04g18770.1|3|1) FN2257-S.SNP.4:10439580 chr04:010439580 0 W/10439580-10439580 FN2257-S SNP C -> G AC=1;AN=190;BQB=0.753843;DP=9295;DP4=4069,4384,17,23;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00311996;MQB=1.8263e-13;MQSB=0.0798612;RPB=0.0509815;SGB=42.958;VDB=0.199383;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V1195|1549|LOC_Os04g18770|protein_coding|CODING|LOC_Os04g18770.1|4|1) FN1549-S.SNP.4:10439718 chr04:010439718 0 W/10439718-10439718 FN1549-S Single Base Substitution T-A INTRON HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3319-S.SNP.4:10440031 chr04:010440031 0 W/10440031-10440031 FN3319-S SNP T -> C AC=1;AN=184;BQB=0.657566;DP=6415;DP4=3339,2754,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00763835;MQB=0.0637744;MQSB=0.276996;RPB=0.981382;SGB=20.7533;VDB=0.673888;EFF=INTRON(MODIFIER||||1549|LOC_Os04g18770|protein_coding|CODING|LOC_Os04g18770.1|5|1) FN4235-S.SNP.4:10448736 chr04:010448736 0 W/10448736-10448736 FN4235-S SNP T -> A AC=1;AN=170;BQB=0.508173;DP=2155;DP4=1043,962,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=21;MQ0F=0.348028;MQB=0.800023;MQSB=0;RPB=0.915543;SGB=10.1134;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.4:10448737 chr04:010448737 0 W/10448737-10448737 FN4235-S SNP T -> G AC=1;AN=170;BQB=0.961541;DP=2156;DP4=1112,961,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=22;MQ0F=0.345547;MQB=0.980838;MQSB=0;RPB=0.918195;SGB=21.1076;VDB=0.305409;EFF=INTERGENIC(MODIFIER||||||||||1) FN977-S.SNP.4:10451781 chr04:010451781 0 W/10451781-10451781 FN977-S Single Base Substitution A-G INTERGENIC HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1339-S.SNP.4:10452124 chr04:010452124 0 W/10452124-10452124 FN1339-S Single Base Substitution G-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3740-S.SNP.4:10455790 chr04:010455790 0 W/10455790-10455790 FN3740-S SNP C -> G AC=1;AN=190;BQB=0.973377;DP=1955;DP4=927,919,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.65892e-05;MQSB=0.0616405;RPB=0.517605;SGB=18.3316;VDB=0.428974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.4:10456421 chr04:010456421 0 W/10456421-10456421 FN2600-S SNP T -> A AC=1;AN=198;BQB=0.822594;DP=3277;DP4=1540,1337,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000305157;MQB=2.00467e-06;MQSB=0.0085511;RPB=0.442711;SGB=54.144;VDB=0.340239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.4:10465734 chr04:010465734 0 W/10465734-10465734 FN1468-S Single Base Substitution G-A INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN2386.SNP.4:10465734 chr04:010465734 0 W/10465734-10465734 FN2386 SNP G -> A AC=1;AN=192;BQB=0.257467;DP=4014;DP4=2606,953,16,3;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.173642;MQB=0.396622;MQSB=2.44225e-07;RPB=0.296513;SGB=-13.0756;VDB=0.0542064;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.4:10465734 chr04:010465734 0 W/10465734-10465734 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3427-S.SNP.4:10468405 chr04:010468405 0 W/10468405-10468405 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.998724;DP=2917;DP4=1544,1282,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07605e-09;MQSB=0.00366087;RPB=0.757224;SGB=71.3514;VDB=0.0223574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.4:10472705 chr04:010472705 0 W/10472705-10472705 FN1416-S Single Base Substitution T-C INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1326-S.SNP.4:10488747 chr04:010488747 0 W/10488747-10488747 FN1326-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g18850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1490-S.SNP.4:10490997 chr04:010490997 0 W/10490997-10490997 FN1490-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN998-S.SNP.4:10493611 chr04:010493611 0 W/10493611-10493611 FN998-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3421-S.SNP.4:10496618 chr04:010496618 0 W/10496618-10496618 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.967946;DP=3116;DP4=1638,1400,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.0568e-07;MQSB=0.971698;RPB=0.991484;SGB=35.7479;VDB=0.908314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.4:10501626 chr04:010501626 0 W/10501626-10501626 FN4011-S SNP T -> C AC=2;AN=168;BQB=0.936231;DP=2576;DP4=1136,1343,15,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.15079e-11;MQSB=0.748106;RPB=0.807194;SGB=114.204;VDB=0.458895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q489R|595|LOC_Os04g18884|protein_coding|CODING|LOC_Os04g18884.1|5|1) FN3105-S.SNP.4:10502163 chr04:010502163 0 W/10502163-10502163 FN3105-S SNP A -> T AC=1;AN=184;BQB=0.999896;DP=2983;DP4=1461,1446,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0217901;MQB=0.000978727;MQSB=0.0885043;RPB=0.978342;SGB=62.3078;VDB=0.182674;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L310*|595|LOC_Os04g18884|protein_coding|CODING|LOC_Os04g18884.1|5|1);LOF=(LOC_Os04g18884|LOC_Os04g18884|1|1.00);NMD=(LOC_Os04g18884|LOC_Os04g18884|1|1.00) FN3382-S.SNP.4:10506590 chr04:010506590 0 W/10506590-10506590 FN3382-S SNP G -> T AC=2;AN=184;BQB=0.955251;DP=2640;DP4=1345,1184,24,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000378788;MQB=3.77188e-21;MQSB=0.98924;RPB=0.806136;SGB=148.222;VDB=0.0259109;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.4:10506591 chr04:010506591 0 W/10506591-10506591 FN3382-S SNP C -> T AC=2;AN=184;BQB=0.995576;DP=2636;DP4=1332,1158,23,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000379363;MQB=1.05881e-20;MQSB=0.986143;RPB=0.965416;SGB=106.184;VDB=0.0195503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.4:10506592 chr04:010506592 0 W/10506592-10506592 FN3382-S SNP G -> T AC=2;AN=184;BQB=0.942788;DP=2658;DP4=1351,1190,26,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000376223;MQB=3.54449e-22;MQSB=0.982703;RPB=0.805179;SGB=123.793;VDB=0.0361332;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.4:10506720 chr04:010506720 0 W/10506720-10506720 FN3927-S SNP T -> G AC=1;AN=156;BQB=0.841306;DP=1876;DP4=672,1009,7,10;HOB=8.21828e-05;ICB=0.000165419;MQ=45;MQ0F=0.00639659;MQB=0.0305912;MQSB=0.647346;RPB=0.998324;SGB=47.5512;VDB=0.178813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1002-S.SNP.4:10507498 chr04:010507498 0 W/10507498-10507498 FN1002-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2496.SNP.4:10508169 chr04:010508169 0 W/10508169-10508169 FN2496 SNP C -> T AC=1;AN=200;BQB=0.956923;DP=4329;DP4=1984,2023,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68196e-08;MQSB=0.976016;RPB=0.953751;SGB=7.88476;VDB=0.833991;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P369L|992|LOC_Os04g18900|protein_coding|CODING|LOC_Os04g18900.1|1|1) FN2689-S.SNP.4:10509094 chr04:010509094 0 W/10509094-10509094 FN2689-S SNP C -> G AC=1;AN=200;BQB=0.839667;DP=4467;DP4=2112,2105,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.88193e-10;MQSB=0.944057;RPB=0.516273;SGB=47.4799;VDB=0.239887;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccG|P645|992|LOC_Os04g18900|protein_coding|CODING|LOC_Os04g18900.1|2|1) FN1228-S.SNP.4:10513146 chr04:010513146 0 W/10513146-10513146 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2593-S.SNP.4:10518183 chr04:010518183 0 W/10518183-10518183 FN2593-S SNP T -> C AC=1;AN=198;BQB=0.997582;DP=3875;DP4=1725,1699,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.83596e-08;MQSB=0.151564;RPB=0.339583;SGB=18.9639;VDB=0.233447;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.4:10518786 chr04:010518786 0 W/10518786-10518786 FN687-S Single Base Substitution T-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2620-S.SNP.4:10519335 chr04:010519335 0 W/10519335-10519335 FN2620-S SNP T -> C AC=1;AN=198;BQB=0.815921;DP=4002;DP4=1653,1999,14,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00374813;MQB=2.88526e-06;MQSB=0.132371;RPB=0.680074;SGB=37.1297;VDB=0.795168;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.4:10521172 chr04:010521172 0 W/10521172-10521172 FN505-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g18920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN_770-6-1.SNP.4:10526624 chr04:010526624 0 W/10526624-10526624 FN_770-6-1 Single Base Substitution G-A HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN696-S.SNP.4:10533445 chr04:010533445 0 W/10533445-10533445 FN696-S Single Base Substitution G-A INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3817-S.SNP.4:10534193 chr04:010534193 0 W/10534193-10534193 FN3817-S SNP G -> T AC=2;AN=190;BQB=0.980935;DP=2448;DP4=1251,1106,13,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.30742e-13;MQSB=0.963755;RPB=0.936759;SGB=71.6393;VDB=0.725566;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.4:10534696 chr04:010534696 0 W/10534696-10534696 FN2081-S SNP C -> A AC=2;AN=168;BQB=0.726128;DP=2699;DP4=902,1737,17,24;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.01497e-14;MQSB=0.909569;RPB=0.937768;SGB=-96.3134;VDB=0.0949364;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.4:10540659 chr04:010540659 0 W/10540659-10540659 W500-4-7-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g18970 retrotransposon, putative, centromere-specific SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN1707-S.SNP.4:10541021 chr04:010541021 0 W/10541021-10541021 FN1707-S SNP T -> C AC=1;AN=188;BQB=0.269932;DP=2849;DP4=1628,1182,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.82962e-10;MQSB=0.755909;RPB=0.959912;SGB=-12.2833;VDB=0.817842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.4:10541708 chr04:010541708 0 W/10541708-10541708 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.953509;DP=5152;DP4=2431,2298,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81234e-10;MQSB=0.968427;RPB=0.655458;SGB=80.9724;VDB=0.460019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I2159V|2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|12|1) FN-356.SNP.4:10542632 chr04:010542632 0 W/10542632-10542632 FN-356 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN494-S.SNP.4:10549261 chr04:010549261 0 W/10549261-10549261 FN494-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g18980 retrotransposon protein, putative, unclassified, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1012-S.SNP.4:10549502 chr04:010549502 0 W/10549502-10549502 FN1012-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g18980 retrotransposon protein, putative, unclassified, expressed SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2752-S.SNP.4:10549755 chr04:010549755 0 W/10549755-10549755 FN2752-S SNP C -> T AC=2;AN=200;BQB=0.975443;DP=5256;DP4=2601,2426,22,12;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0.11739;MQB=0.317933;MQSB=0;RPB=0.413146;SGB=112.373;VDB=0.561466;EFF=SPLICE_SITE_REGION(LOW||||2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|5|1),INTRON(MODIFIER||||2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|5|1) FN2141-S.SNP.4:10551583 chr04:010551583 0 W/10551583-10551583 FN2141-S SNP C -> T AC=2;AN=168;BQB=0.53375;DP=2808;DP4=1292,1430,15,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000356125;MQB=5.17176e-13;MQSB=0.0363503;RPB=0.531811;SGB=63.5086;VDB=0.680508;EFF=INTRON(MODIFIER||||2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|3|1) FN2555-S.SNP.4:10551583 chr04:010551583 0 W/10551583-10551583 FN2555-S SNP C -> T AC=2;AN=198;BQB=0.987879;DP=4173;DP4=1945,1962,17,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.77416e-23;MQSB=0.122227;RPB=0.767783;SGB=151.598;VDB=0.0424536;EFF=INTRON(MODIFIER||||2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|3|1) FN2109-S.SNP.4:10553653 chr04:010553653 0 W/10553653-10553653 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.976638;DP=1918;DP4=558,1293,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0260688;MQB=0.00436544;MQSB=0.000494129;RPB=0.299264;SGB=38.8805;VDB=0.317029;EFF=INTRON(MODIFIER||||2241|LOC_Os04g18980|protein_coding|CODING|LOC_Os04g18980.1|1|1) FN521-S.SNP.4:10553685 chr04:010553685 0 W/10553685-10553685 FN521-S Single Base Substitution C-T INTRON HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3432-S.SNP.4:10556072 chr04:010556072 0 W/10556072-10556072 FN3432-S SNP G -> T AC=1;AN=184;BQB=0.818287;DP=2903;DP4=1380,1450,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000344471;MQB=1.32534e-07;MQSB=0.956957;RPB=0.835254;SGB=57.786;VDB=0.681875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A137S|268|LOC_Os04g18990|protein_coding|CODING|LOC_Os04g18990.1|2|1) FN1064-S.SNP.4:10560299 chr04:010560299 0 W/10560299-10560299 FN1064-S Single Base Substitution G-C INTRON HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN3570-S.SNP.4:10560549 chr04:010560549 0 W/10560549-10560549 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.86472;DP=2601;DP4=1337,1116,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.7994e-07;MQSB=0.970773;RPB=0.317218;SGB=53.6492;VDB=0.0516771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H126R|565|LOC_Os04g19000|protein_coding|CODING|LOC_Os04g19000.1|2|1) FN2479.SNP.4:10564072 chr04:010564072 0 W/10564072-10564072 FN2479 SNP G -> A AC=1;AN=200;BQB=0.330685;DP=4169;DP4=2006,1930,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.73872e-14;MQSB=0.98548;RPB=0.25202;SGB=95.7111;VDB=0.831797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.4:10566100 chr04:010566100 0 W/10566100-10566100 FN2497 SNP G -> A AC=1;AN=200;BQB=0.649695;DP=4670;DP4=2333,1974,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27811e-11;MQSB=0.910717;RPB=0.935095;SGB=61.9006;VDB=0.506206;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.4:10566452 chr04:010566452 0 W/10566452-10566452 FN462-S Single Base Substitution C-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1698-S.SNP.4:10571851 chr04:010571851 0 W/10571851-10571851 FN1698-S SNP G -> A AC=1;AN=188;BQB=0.702429;DP=2998;DP4=1637,1332,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.00833889;MQB=0.596063;MQSB=0.972913;RPB=0.993148;SGB=28.8977;VDB=0.946788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.4:10571919 chr04:010571919 0 W/10571919-10571919 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.206654;DP=4740;DP4=2163,2382,9,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0092827;MQB=2.74254e-06;MQSB=0.00916557;RPB=0.371438;SGB=-15.5309;VDB=0.37956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN2296 SNP G -> T AC=2;AN=192;BQB=0.389249;DP=4804;DP4=2229,2239,29,29;HOB=0.0206163;ICB=0.494846;MQ=29;MQ0F=0.0913822;MQB=0.96134;MQSB=2.1975e-24;RPB=0.215962;SGB=259.17;VDB=0.0621432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN2779-S SNP G -> T AC=1;AN=198;BQB=0.0317321;DP=3693;DP4=1745,1755,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.0926076;MQB=0.694048;MQSB=4.6317e-13;RPB=0.947988;SGB=68.91;VDB=0.0889476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN3832-S SNP G -> T AC=2;AN=190;BQB=0.919186;DP=3188;DP4=1393,1660,14,17;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.121079;MQB=0.988855;MQSB=9.02793e-08;RPB=0.496872;SGB=135.619;VDB=0.850331;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN4138-S SNP G -> T AC=1;AN=170;BQB=0.90203;DP=2590;DP4=1170,1352,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.10888;MQB=0.773454;MQSB=0.00246194;RPB=0.90412;SGB=61.2001;VDB=0.469539;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN510-S Single Base Substitution G-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN585-S.SNP.4:10578278 chr04:010578278 0 W/10578278-10578278 FN585-S Single Base Substitution G-T INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1046-S.SNP.4:10579442 chr04:010579442 0 W/10579442-10579442 FN1046-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g19060 retrotransposon, putative, centromere-specific SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3829-S.SNP.4:10580130 chr04:010580130 0 W/10580130-10580130 FN3829-S SNP G -> A AC=1;AN=190;BQB=1;DP=3077;DP4=1667,1320,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.54005e-08;MQSB=0.759046;RPB=0.587863;SGB=58.2031;VDB=0.932552;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H152|426|LOC_Os04g19060|protein_coding|CODING|LOC_Os04g19060.1|1|1) FN998-S.SNP.4:10580446 chr04:010580446 0 W/10580446-10580446 FN998-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g19060 retrotransposon, putative, centromere-specific SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2482.SNP.4:10584126 chr04:010584126 0 W/10584126-10584126 FN2482 SNP T -> A AC=1;AN=200;BQB=0.213391;DP=8638;DP4=2304,5766,9,21;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.202709;MQB=0.0108098;MQSB=0;RPB=0.278188;SGB=28.752;VDB=0.577736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.4:10584426 chr04:010584426 0 W/10584426-10584426 FN1330-S Single Base Substitution G-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3357-S.SNP.4:10587367 chr04:010587367 0 W/10587367-10587367 FN3357-S SNP G -> A AC=1;AN=184;BQB=0.900489;DP=2885;DP4=1553,1239,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.43417e-11;MQSB=0.834674;RPB=0.583281;SGB=67.4439;VDB=0.92157;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E34|58|LOC_Os04g19070|protein_coding|CODING|LOC_Os04g19070.1|1|1) FN2284.SNP.4:10590601 chr04:010590601 0 W/10590601-10590601 FN2284 SNP G -> T AC=1;AN=192;BQB=0.776435;DP=4725;DP4=2416,2051,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000236082;MQSB=0.996264;RPB=0.816723;SGB=25.5227;VDB=0.389245;EFF=INTRON(MODIFIER||||776|LOC_Os04g19080|protein_coding|CODING|LOC_Os04g19080.1|3|1) FN-72.SNP.4:10602933 chr04:010602933 0 W/10602933-10602933 FN-72 Single Base Substitution T-A INTERGENIC HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN4108-S.SNP.4:10603648 chr04:010603648 0 W/10603648-10603648 FN4108-S SNP G -> A AC=2;AN=182;BQB=0.941666;DP=3101;DP4=1444,1488,8,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.1022e-10;MQSB=0.972669;RPB=0.721044;SGB=56.6929;VDB=0.915789;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.4:10603754 chr04:010603754 0 W/10603754-10603754 FN-131 Single Base Substitution C-T INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN4064-S.SNP.4:10604688 chr04:010604688 0 W/10604688-10604688 FN4064-S SNP T -> A AC=1;AN=168;BQB=0.54798;DP=2845;DP4=1321,1356,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.08576e-05;MQSB=0.995698;RPB=0.943824;SGB=12.4615;VDB=0.826644;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.4:10606396 chr04:010606396 0 W/10606396-10606396 FN414-S Single Base Substitution G-A INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2266-S.SNP.4:10613700 chr04:010613700 0 W/10613700-10613700 FN2266-S SNP T -> C AC=2;AN=190;BQB=0.790826;DP=4264;DP4=1936,2037,15,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.25907e-17;MQSB=0.982302;RPB=0.619143;SGB=69.6295;VDB=0.300167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q396R|1230|LOC_Os04g19114|protein_coding|CODING|LOC_Os04g19114.1|4|1) FN3690-S.SNP.4:10614141 chr04:010614141 0 W/10614141-10614141 FN3690-S SNP A -> T AC=2;AN=190;BQB=0.74025;DP=2878;DP4=1392,1354,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.56107e-12;MQSB=0.986115;RPB=0.953473;SGB=85.5263;VDB=0.73668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I249N|1230|LOC_Os04g19114|protein_coding|CODING|LOC_Os04g19114.1|4|1) FN487-S.SNP.4:10614253 chr04:010614253 0 W/10614253-10614253 FN487-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g19114 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN-124.SNP.4:10616048 chr04:010616048 0 W/10616048-10616048 FN-124 Single Base Substitution C-T INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN_955-1.SNP.4:10616333 chr04:010616333 0 W/10616333-10616333 FN_955-1 Single Base Substitution G-T Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN-313.SNP.4:10630449 chr04:010630449 0 W/10630449-10630449 FN-313 Single Base Substitution C-T INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1561-S.SNP.4:10630720 chr04:010630720 0 W/10630720-10630720 FN1561-S Single Base Substitution C-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN696-S.SNP.4:10630786 chr04:010630786 0 W/10630786-10630786 FN696-S Single Base Substitution A-T INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1647-S.SNP.4:10632667 chr04:010632667 0 W/10632667-10632667 FN1647-S Single Base Substitution C-T INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN3305-S.SNP.4:10632920 chr04:010632920 0 W/10632920-10632920 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.95498;DP=4120;DP4=1903,2088,5,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26076e-11;MQSB=0.996659;RPB=0.972676;SGB=84.9167;VDB=0.0426679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.4:10634328 chr04:010634328 0 W/10634328-10634328 FN1046-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1572-S.SNP.4:10635111 chr04:010635111 0 W/10635111-10635111 FN1572-S Single Base Substitution G-A INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN343-S.SNP.4:10635666 chr04:010635666 0 W/10635666-10635666 FN343-S Single Base Substitution C-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2580-S.SNP.4:10637028 chr04:010637028 0 W/10637028-10637028 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.776132;DP=4788;DP4=2054,2394,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00960735;MQB=4.49076e-06;MQSB=0.401535;RPB=0.810363;SGB=25.3006;VDB=0.827003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.4:10640225 chr04:010640225 0 W/10640225-10640225 FN2283 SNP G -> C AC=1;AN=192;BQB=0.900206;DP=4047;DP4=2015,1788,5,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=7.18743e-09;MQSB=0.806015;RPB=0.649783;SGB=36.607;VDB=0.32259;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.4:10645178 chr04:010645178 0 W/10645178-10645178 FN-264 Single Base Substitution G-A INTRON HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN795-S.SNP.4:10654892 chr04:010654892 0 W/10654892-10654892 FN795-S Single Base Substitution C-T INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2790-S.SNP.4:10657466 chr04:010657466 0 W/10657466-10657466 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.77656;DP=4321;DP4=2009,2090,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000694284;MQB=5.50349e-10;MQSB=0.455162;RPB=0.720014;SGB=31.9395;VDB=0.442373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G67S|551|LOC_Os04g19190|protein_coding|CODING|LOC_Os04g19190.1|1|1) FN2265-S.SNP.4:10667075 chr04:010667075 0 W/10667075-10667075 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.812468;DP=3902;DP4=2156,1400,16,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000256279;MQB=6.1096e-14;MQSB=0.0516118;RPB=0.590018;SGB=-73.3343;VDB=0.468049;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.4:10668997 chr04:010668997 0 W/10668997-10668997 FN868-S Single Base Substitution C-A INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1062-S.SNP.4:10670140 chr04:010670140 0 W/10670140-10670140 FN1062-S Single Base Substitution G-T INTRON HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN942-S.SNP.4:10674894 chr04:010674894 0 W/10674894-10674894 FN942-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g19210 retrotransposon, putative, centromere-specific, expressed SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2243-S.SNP.4:10676258 chr04:010676258 0 W/10676258-10676258 FN2243-S SNP A -> C AC=2;AN=190;BQB=0.830897;DP=4688;DP4=2191,2152,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.96318e-20;MQSB=0.995994;RPB=0.922098;SGB=139.163;VDB=0.801798;EFF=INTRON(MODIFIER||||632|LOC_Os04g19210|protein_coding|CODING|LOC_Os04g19210.1|2|1) FN-222.SNP.4:10679282 chr04:010679282 0 W/10679282-10679282 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1622-S.SNP.4:10679321 chr04:010679321 0 W/10679321-10679321 FN1622-S Single Base Substitution A-G INTERGENIC Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2146-S.SNP.4:10680566 chr04:010680566 0 W/10680566-10680566 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.000103586;DP=3638;DP4=1557,2005,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000648695;MQSB=0.800584;RPB=0.271761;SGB=-255.325;VDB=0.495434;EFF=SPLICE_SITE_DONOR(HIGH||||14|LOC_Os04g19230|protein_coding|CODING|LOC_Os04g19230.1|1|1),INTRON(MODIFIER||||14|LOC_Os04g19230|protein_coding|CODING|LOC_Os04g19230.1|1|1);LOF=(LOC_Os04g19230|LOC_Os04g19230|1|1.00) FN732-S.SNP.4:10680975 chr04:010680975 0 W/10680975-10680975 FN732-S Single Base Substitution T-C INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN1762-S.SNP.4:10685381 chr04:010685381 0 W/10685381-10685381 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.216941;DP=3660;DP4=1641,1976,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64249e-06;MQSB=0.977908;RPB=0.934923;SGB=11.7114;VDB=0.723308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R169H|283|LOC_Os04g19240|protein_coding|CODING|LOC_Os04g19240.1|3|1) FN2178-S.SNP.4:10686214 chr04:010686214 0 W/10686214-10686214 FN2178-S SNP G -> C AC=1;AN=168;BQB=0.00436008;DP=3256;DP4=1465,1747,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91794e-08;MQSB=0.983719;RPB=0.668566;SGB=-37.7974;VDB=0.218673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A222P|283|LOC_Os04g19240|protein_coding|CODING|LOC_Os04g19240.1|5|1) FN4145-S.SNP.4:10686241 chr04:010686241 0 W/10686241-10686241 FN4145-S SNP G -> A AC=1;AN=170;BQB=0.967359;DP=2334;DP4=1177,1095,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.71316e-08;MQSB=0.98244;RPB=0.33887;SGB=47.8722;VDB=0.36355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G231S|283|LOC_Os04g19240|protein_coding|CODING|LOC_Os04g19240.1|5|1) FN725-S.SNP.4:10689738 chr04:010689738 0 W/10689738-10689738 FN725-S Single Base Substitution G-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2345.SNP.4:10692542 chr04:010692542 0 W/10692542-10692542 FN2345 SNP G -> A AC=2;AN=192;BQB=0.501265;DP=4997;DP4=2534,2045,37,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.80559e-38;MQSB=0.999758;RPB=0.999943;SGB=-58.853;VDB=0.504819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.4:10693686 chr04:010693686 0 W/10693686-10693686 FN2244-S SNP G -> A AC=1;AN=190;BQB=0.982983;DP=3959;DP4=1541,2080,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.54074e-08;MQSB=0.689473;RPB=0.740178;SGB=7.21887;VDB=0.247889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.4:10696376 chr04:010696376 0 W/10696376-10696376 FN-83 Single Base Substitution C-T INTERGENIC HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN2620-S.SNP.4:10697076 chr04:010697076 0 W/10697076-10697076 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.274447;DP=4137;DP4=2053,1824,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.87955e-14;MQSB=0.673687;RPB=0.577493;SGB=83.2905;VDB=0.978567;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.4:10697908 chr04:010697908 0 W/10697908-10697908 FN1441-S Single Base Substitution A-C INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2447.SNP.4:10700879 chr04:010700879 0 W/10700879-10700879 FN2447 SNP G -> A AC=1;AN=200;BQB=0.705914;DP=4608;DP4=2191,2176,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.78188e-12;MQSB=0.991948;RPB=0.193066;SGB=65.5058;VDB=0.687944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S1241L|1383|LOC_Os04g19260|protein_coding|CODING|LOC_Os04g19260.1|5|1) FN3887-S.SNP.4:10706853 chr04:010706853 0 W/10706853-10706853 FN3887-S SNP G -> T AC=1;AN=158;BQB=0.998709;DP=2307;DP4=933,1272,7,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.03513e-11;MQSB=0.486893;RPB=0.958024;SGB=86.3921;VDB=0.730119;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.4:10717057 chr04:010717057 0 W/10717057-10717057 FN-66 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g19270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1693-S.SNP.4:10720978 chr04:010720978 0 W/10720978-10720978 FN1693-S SNP A -> T AC=2;AN=188;BQB=0.311827;DP=2277;DP4=1063,1172,12,15;HOB=0.0210502;ICB=0.494738;MQ=17;MQ0F=0.274484;MQB=0.146144;MQSB=5.01564e-38;RPB=0.0740537;SGB=-103.637;VDB=0.61292;EFF=INTRON(MODIFIER||||1717|LOC_Os04g19270|protein_coding|CODING|LOC_Os04g19270.1|1|1) FN3400-S.SNP.4:10722289 chr04:010722289 0 W/10722289-10722289 FN3400-S SNP T -> C AC=1;AN=184;BQB=0.920589;DP=3502;DP4=1950,1346,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.182182;MQB=0.610992;MQSB=0;RPB=0.998593;SGB=-11.5833;VDB=0.833092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.4:10723060 chr04:010723060 0 W/10723060-10723060 FN4206-S SNP G -> A AC=1;AN=170;BQB=0.988245;DP=1531;DP4=749,622,5,2;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00849118;MQB=0.0570915;MQSB=0.029407;RPB=0.886703;SGB=25.6601;VDB=0.669559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.4:10724103 chr04:010724103 0 W/10724103-10724103 FN1047-S Single Base Substitution C-T INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2381.SNP.4:10724103 chr04:010724103 0 W/10724103-10724103 FN2381 SNP C -> T AC=1;AN=192;BQB=0.914334;DP=4599;DP4=1741,2274,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00260926;MQB=0.037547;MQSB=4.70251e-10;RPB=0.850367;SGB=89.6809;VDB=0.934195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.4:10724103 chr04:010724103 0 W/10724103-10724103 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.857079;DP=3600;DP4=1427,1827,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00277778;MQB=0.147699;MQSB=0.000262737;RPB=0.96759;SGB=35.7638;VDB=0.840568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.4:10724103 chr04:010724103 0 W/10724103-10724103 FN4066-S SNP C -> T AC=1;AN=168;BQB=0.998838;DP=2589;DP4=1016,1458,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.001545;MQB=0.0472293;MQSB=0.987602;RPB=0.336379;SGB=27.8864;VDB=0.179012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.4:10724222 chr04:010724222 0 W/10724222-10724222 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.405311;DP=3410;DP4=1398,1743,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.71877e-06;MQSB=0.0934687;RPB=0.909821;SGB=53.6492;VDB=0.95217;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.4:10725130 chr04:010725130 0 W/10725130-10725130 FN1464-S Single Base Substitution C-T INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1446-S.SNP.4:10730314 chr04:010730314 0 W/10730314-10730314 FN1446-S Single Base Substitution C-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2216-S.SNP.4:10732337 chr04:010732337 0 W/10732337-10732337 FN2216-S SNP C -> T AC=1;AN=190;BQB=0.999965;DP=4769;DP4=2299,2137,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.9365e-08;MQSB=0.963553;RPB=0.631401;SGB=46.7622;VDB=0.82696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P205L|1205|LOC_Os04g19290|protein_coding|CODING|LOC_Os04g19290.1|2|1) FN3809-S.SNP.4:10738369 chr04:010738369 0 W/10738369-10738369 FN3809-S SNP A -> G AC=1;AN=190;BQB=0.263926;DP=2654;DP4=1308,1257,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000221784;MQSB=0.968045;RPB=0.799175;SGB=18.552;VDB=0.588044;EFF=INTRON(MODIFIER||||458|LOC_Os04g19300|protein_coding|CODING|LOC_Os04g19300.1|2|1) FN3514-S.SNP.4:10741855 chr04:010741855 0 W/10741855-10741855 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.354425;DP=2859;DP4=1310,1414,6,10;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000349773;MQB=0.000413628;MQSB=5.25598e-09;RPB=0.929387;SGB=46.6141;VDB=0.249133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.4:10743446 chr04:010743446 0 W/10743446-10743446 FN2268-S SNP G -> C AC=1;AN=190;BQB=0.888954;DP=5022;DP4=2374,2146,16,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2979e-15;MQSB=0.685571;RPB=0.978095;SGB=144.727;VDB=0.993706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.4:10745948 chr04:010745948 0 W/10745948-10745948 FN2458 SNP C -> T AC=1;AN=200;BQB=0.967693;DP=4698;DP4=2432,1966,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15363e-10;MQSB=0.910837;RPB=0.123098;SGB=11.0951;VDB=0.656285;EFF=INTRON(MODIFIER||||144|LOC_Os04g19310|protein_coding|CODING|LOC_Os04g19310.1|1|1) W464-2-1.SNP.4:10748366 chr04:010748366 0 W/10748366-10748366 W464-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-132.SNP.4:10750595 chr04:010750595 0 W/10750595-10750595 FN-132 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g19320 retrotransposon protein, putative, unclassified, expressed SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1646-S.SNP.4:10751234 chr04:010751234 0 W/10751234-10751234 FN1646-S Single Base Substitution C-T INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN266-S.SNP.4:10752425 chr04:010752425 0 W/10752425-10752425 FN266-S Single Base Substitution C-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2107-S.SNP.4:10767268 chr04:010767268 0 W/10767268-10767268 FN2107-S SNP A -> G AC=1;AN=168;BQB=0.0253935;DP=3995;DP4=1772,2186,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000556822;MQSB=0.747261;RPB=0.910882;SGB=-105.072;VDB=0.784482;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.4:10769085 chr04:010769085 0 W/10769085-10769085 FN997-S Single Base Substitution C-A INTRON HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN1025-S.SNP.4:10770907 chr04:010770907 0 W/10770907-10770907 FN1025-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g19360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3479-S.SNP.4:10775238 chr04:010775238 0 W/10775238-10775238 FN3479-S SNP C -> T AC=2;AN=184;BQB=0.241195;DP=2808;DP4=1272,1449,14,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000356125;MQB=1.9382e-14;MQSB=0.998218;RPB=0.649343;SGB=28.1074;VDB=0.071493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E409K|1155|LOC_Os04g19360|protein_coding|CODING|LOC_Os04g19360.1|4|1) FN1252-S.SNP.4:10780712 chr04:010780712 0 W/10780712-10780712 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1193-S.SNP.4:10783852 chr04:010783852 0 W/10783852-10783852 FN1193-S Single Base Substitution A-T SPLICE_SITE_REGION HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2705-S.SNP.4:10787821 chr04:010787821 0 W/10787821-10787821 FN2705-S SNP T -> C AC=1;AN=200;BQB=0.00241961;DP=4993;DP4=2555,2252,7,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000158223;MQSB=4.64946e-15;RPB=0.822075;SGB=19.0642;VDB=0.908313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.4:10791099 chr04:010791099 0 W/10791099-10791099 FN3789-S SNP C -> T AC=1;AN=190;BQB=0.992907;DP=2639;DP4=1255,1292,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000378931;MQB=5.71641e-07;MQSB=0.762359;RPB=0.999538;SGB=71.8647;VDB=0.42167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S397N|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|4|1) FN-167.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN-167 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-25.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN-25 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN-295.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN-295 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1623-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN1623-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1697-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN1697-S SNP C -> T AC=2;AN=188;BQB=0.0526488;DP=2470;DP4=1201,1209,25,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08351e-13;MQSB=0.933489;RPB=0.934683;SGB=-88.1232;VDB=0.691626;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN2113-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.420753;DP=3091;DP4=1467,1578,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.59471e-10;MQSB=0.994208;RPB=0.903527;SGB=-14.0801;VDB=0.740199;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN2707-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.99853;DP=4596;DP4=2206,2181,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.48298e-08;MQSB=0.593418;RPB=0.999758;SGB=58.8698;VDB=0.688029;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN3416-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN3416-S SNP C -> T AC=2;AN=184;BQB=0.387357;DP=3029;DP4=1545,1410,18,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.0027e-11;MQSB=0.97778;RPB=0.859428;SGB=107.526;VDB=0.511589;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN3510-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.96701;DP=2848;DP4=1460,1340,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.40379e-10;MQSB=0.926045;RPB=0.943105;SGB=67.1521;VDB=0.571004;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN3731-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN3731-S SNP C -> T AC=2;AN=190;BQB=0.988694;DP=2821;DP4=1446,1273,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.13531e-17;MQSB=0.93567;RPB=0.911389;SGB=131.065;VDB=0.809911;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN4133-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.875089;DP=3063;DP4=1504,1499,12,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.20411e-10;MQSB=0.984315;RPB=0.988996;SGB=80.1982;VDB=0.986644;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A130|727|LOC_Os04g19380|protein_coding|CODING|LOC_Os04g19380.1|2|1) FN456-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN456-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN837-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN837-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN947-S.SNP.4:10792584 chr04:010792584 0 W/10792584-10792584 FN947-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN899-S.SNP.4:10793252 chr04:010793252 0 W/10793252-10793252 FN899-S Single Base Substitution C-A INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2322.SNP.4:10793293 chr04:010793293 0 W/10793293-10793293 FN2322 SNP C -> T AC=1;AN=192;BQB=0.600928;DP=5330;DP4=2714,2308,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58555e-13;MQSB=0.746296;RPB=0.484542;SGB=21.4339;VDB=0.368134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.4:10795501 chr04:010795501 0 W/10795501-10795501 FN2255-S SNP C -> T AC=1;AN=190;BQB=0.54498;DP=5462;DP4=2495,2567,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000183083;MQB=1.16645e-10;MQSB=0.181208;RPB=0.921323;SGB=14.9883;VDB=0.331555;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.4:10801621 chr04:010801621 0 W/10801621-10801621 FN781-S Single Base Substitution A-G INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2538-S.SNP.4:10802491 chr04:010802491 0 W/10802491-10802491 FN2538-S SNP G -> A AC=2;AN=198;BQB=0.395654;DP=4078;DP4=1967,1844,31,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.33289e-30;MQSB=0.600235;RPB=0.82126;SGB=73.1542;VDB=0.533837;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.4:10804501 chr04:010804501 0 W/10804501-10804501 FN3440-S SNP C -> A AC=2;AN=184;BQB=0.883407;DP=3314;DP4=1773,1425,22,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.42736e-28;MQSB=0.994717;RPB=0.157743;SGB=207.005;VDB=0.209126;EFF=INTRON(MODIFIER||||580|LOC_Os04g19390|protein_coding|CODING|LOC_Os04g19390.1|2|1) FN3911-S.SNP.4:10813061 chr04:010813061 0 W/10813061-10813061 FN3911-S SNP G -> A AC=1;AN=158;BQB=0.923779;DP=2832;DP4=1429,1306,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.111582;MQB=0.362413;MQSB=0.00422134;RPB=0.162302;SGB=42.6978;VDB=0.454876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.4:10813104 chr04:010813104 0 W/10813104-10813104 FN3287-S SNP G -> C AC=2;AN=184;BQB=0.856988;DP=3091;DP4=1565,1417,23,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4799e-17;MQSB=0.868272;RPB=0.97767;SGB=109.705;VDB=0.430536;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.4:10813531 chr04:010813531 0 W/10813531-10813531 FN-287 Single Base Substitution T-C INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2545-S.SNP.4:10813959 chr04:010813959 0 W/10813959-10813959 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.801178;DP=4510;DP4=2058,2097,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.024612;MQB=0.375268;MQSB=6.72623e-43;RPB=0.539205;SGB=72.5245;VDB=0.359373;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.4:10815079 chr04:010815079 0 W/10815079-10815079 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.745526;DP=3198;DP4=1600,1532,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0988118;MQB=0.896977;MQSB=0.645783;RPB=0.905323;SGB=43.4296;VDB=0.059314;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M183V|390|LOC_Os04g19410|protein_coding|CODING|LOC_Os04g19410.1|2|1) FN1415-S.SNP.4:10818616 chr04:010818616 0 W/10818616-10818616 FN1415-S Single Base Substitution G-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN835-S.SNP.4:10820887 chr04:010820887 0 W/10820887-10820887 FN835-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g19420 retrotransposon protein, putative, unclassified, expressed SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1713-S.SNP.4:10822030 chr04:010822030 0 W/10822030-10822030 FN1713-S SNP G -> T AC=1;AN=188;BQB=0.21773;DP=2955;DP4=1426,1480,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74464e-07;MQSB=0.997339;RPB=0.624099;SGB=13.2547;VDB=0.572881;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S27|612|LOC_Os04g19420|protein_coding|CODING|LOC_Os04g19420.1|1|1) FN3370-S.SNP.4:10822928 chr04:010822928 0 W/10822928-10822928 FN3370-S SNP C -> T AC=2;AN=184;BQB=0.991227;DP=3107;DP4=1547,1386,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.51562e-12;MQSB=0.990077;RPB=0.947614;SGB=74.4875;VDB=0.573211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.4:10825708 chr04:010825708 0 W/10825708-10825708 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.681437;DP=2963;DP4=1555,1318,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03563e-08;MQSB=0.982772;RPB=0.616547;SGB=76.4186;VDB=0.118776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.4:10825907 chr04:010825907 0 W/10825907-10825907 FN3663-S SNP G -> T AC=1;AN=190;BQB=0.999939;DP=2752;DP4=1434,1207,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45157e-07;MQSB=0.762026;RPB=0.494182;SGB=44.5415;VDB=0.46283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.4:10826052 chr04:010826052 0 W/10826052-10826052 FN2481 SNP C -> A AC=1;AN=200;BQB=0.980712;DP=4592;DP4=2217,2128,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76875e-07;MQSB=0.962329;RPB=0.981973;SGB=54.2646;VDB=0.19108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S13Y|768|LOC_Os04g19430|protein_coding|CODING|LOC_Os04g19430.1|1|1) FN-402.SNP.4:10828703 chr04:010828703 0 W/10828703-10828703 FN-402 Single Base Substitution A-G INTRON HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN532-S.SNP.4:10831427 chr04:010831427 0 W/10831427-10831427 FN532-S Single Base Substitution G-A INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN1485-S.SNP.4:10835377 chr04:010835377 0 W/10835377-10835377 FN1485-S Single Base Substitution A-G INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2579-S.SNP.4:10835731 chr04:010835731 0 W/10835731-10835731 FN2579-S SNP A -> G AC=2;AN=198;BQB=0.99026;DP=4165;DP4=1875,2078,33,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.64251e-32;MQSB=0.748375;RPB=0.829155;SGB=278.313;VDB=0.983329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.4:10840220 chr04:010840220 0 W/10840220-10840220 FN2129-S SNP T -> C AC=1;AN=168;BQB=0.396143;DP=3102;DP4=1644,1408,20,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.17763e-22;MQSB=0.999923;RPB=0.0212888;SGB=167.374;VDB=0.960563;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.4:10841584 chr04:010841584 0 W/10841584-10841584 FN943-S Single Base Substitution C-G INTRON HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN-277.SNP.4:10842004 chr04:010842004 0 W/10842004-10842004 FN-277 Single Base Substitution A-G INTRON HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1662-S.SNP.4:10843559 chr04:010843559 0 W/10843559-10843559 FN1662-S Single Base Substitution C-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN900-S.SNP.4:10847702 chr04:010847702 0 W/10847702-10847702 FN900-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g19480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN2192-S.SNP.4:10848057 chr04:010848057 0 W/10848057-10848057 FN2192-S SNP T -> A AC=1;AN=190;BQB=0.999792;DP=4964;DP4=2376,2175,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.06122e-12;MQSB=0.903614;RPB=0.884464;SGB=46.6446;VDB=0.966795;EFF=INTRON(MODIFIER||||267|LOC_Os04g19480|protein_coding|CODING|LOC_Os04g19480.1|4|1) FN2388.SNP.4:10850268 chr04:010850268 0 W/10850268-10850268 FN2388 SNP G -> T AC=1;AN=200;BQB=0.367841;DP=4913;DP4=2055,2407,15,10;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0924079;MQB=0.705651;MQSB=0.0343349;RPB=0.951997;SGB=20.7261;VDB=0.868539;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.4:10857348 chr04:010857348 0 W/10857348-10857348 FN2403 SNP C -> A AC=1;AN=200;BQB=0.216939;DP=4747;DP4=2186,2289,8,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00337055;MQB=1.44971e-08;MQSB=0.167235;RPB=0.78808;SGB=86.5007;VDB=0.0380793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.4:10857757 chr04:010857757 0 W/10857757-10857757 FN3909-S SNP C -> T AC=1;AN=158;BQB=0.991162;DP=2383;DP4=1113,1177,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=9.64868e-05;MQSB=8.04006e-06;RPB=0.76681;SGB=30.704;VDB=0.963816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3507-S.SNP.4:10862941 chr04:010862941 0 W/10862941-10862941 FN3507-S SNP A -> C AC=1;AN=188;BQB=0.991017;DP=2901;DP4=1166,1619,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56732e-08;MQSB=0.886429;RPB=0.674634;SGB=62.6088;VDB=0.486663;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.4:10866259 chr04:010866259 0 W/10866259-10866259 FN-216 Single Base Substitution G-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN185-2_3_4.SNP.4:10867376 chr04:010867376 0 W/10867376-10867376 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.539838;DP=3318;DP4=1908,1341,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00602773;MQB=0.000693141;MQSB=0.056435;RPB=0.954463;SGB=10.1681;VDB=0.0774748;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.4:10867468 chr04:010867468 0 W/10867468-10867468 FN4253-S SNP G -> A AC=1;AN=170;BQB=0.792991;DP=2718;DP4=1244,1407,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0084621;MQB=0.00134216;MQSB=0.505562;RPB=0.833096;SGB=47.8722;VDB=0.354736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.4:10867929 chr04:010867929 0 W/10867929-10867929 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.39046;DP=3090;DP4=1533,1391,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00420712;MQB=5.74812e-06;MQSB=0.0933806;RPB=0.721572;SGB=-16.2794;VDB=0.365514;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.4:10870995 chr04:010870995 0 W/10870995-10870995 FN2375 SNP G -> A AC=2;AN=192;BQB=0.789127;DP=4977;DP4=2441,2215,30,14;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00361664;MQB=1.36173e-15;MQSB=0.818377;RPB=0.818839;SGB=98.1513;VDB=0.292098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.4:10874229 chr04:010874229 0 W/10874229-10874229 FN3508-S SNP G -> T AC=1;AN=188;BQB=0.990837;DP=3448;DP4=1630,1714,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25379e-08;MQSB=0.981541;RPB=0.978952;SGB=23.5329;VDB=0.961022;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S1389|1439|LOC_Os04g19540|protein_coding|CODING|LOC_Os04g19540.1|14|1) FN-52.SNP.4:10874556 chr04:010874556 0 W/10874556-10874556 FN-52 Single Base Substitution G-T STOP_GAINED HOMO LOC_Os04g19540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN469-S.SNP.4:10875685 chr04:010875685 0 W/10875685-10875685 FN469-S Single Base Substitution C-A INTRON HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN432-S.SNP.4:10875864 chr04:010875864 0 W/10875864-10875864 FN432-S Single Base Substitution G-A INTRON HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-35.SNP.4:10876623 chr04:010876623 0 W/10876623-10876623 FN-35 Single Base Substitution T-A INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1195-S.SNP.4:10878421 chr04:010878421 0 W/10878421-10878421 FN1195-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN514-S.SNP.4:10878885 chr04:010878885 0 W/10878885-10878885 FN514-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g19540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2784-S.SNP.4:10882644 chr04:010882644 0 W/10882644-10882644 FN2784-S SNP G -> T AC=2;AN=198;BQB=0.983772;DP=3925;DP4=1850,1830,22,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.2961e-26;MQSB=0.905936;RPB=0.503149;SGB=173.168;VDB=0.580689;EFF=INTRON(MODIFIER||||1439|LOC_Os04g19540|protein_coding|CODING|LOC_Os04g19540.1|6|1) FN2181-S.SNP.4:10886749 chr04:010886749 0 W/10886749-10886749 FN2181-S SNP T -> C AC=1;AN=190;BQB=0.869946;DP=5214;DP4=2292,2617,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000191791;MQB=1.13178e-13;MQSB=0.97839;RPB=0.0372268;SGB=46.6446;VDB=0.240336;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.4:10889671 chr04:010889671 0 W/10889671-10889671 FN1617-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3490-S.SNP.4:10891672 chr04:010891672 0 W/10891672-10891672 FN3490-S SNP G -> A AC=2;AN=184;BQB=0.757605;DP=3106;DP4=1402,1534,16,25;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.35834e-12;MQSB=5.98276e-06;RPB=0.774233;SGB=179.874;VDB=0.698362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.4:10892113 chr04:010892113 0 W/10892113-10892113 FN1412-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g19570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3401-S.SNP.4:10895781 chr04:010895781 0 W/10895781-10895781 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.92765;DP=3385;DP4=1665,1633,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.53283e-09;MQSB=0.458675;RPB=0.759905;SGB=62.3078;VDB=0.932565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.4:10897137 chr04:010897137 0 W/10897137-10897137 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2530-S.SNP.4:10901030 chr04:010901030 0 W/10901030-10901030 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.666638;DP=4441;DP4=2226,1987,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.12871e-15;MQSB=0.976498;RPB=0.896723;SGB=23.7055;VDB=0.629214;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.4:10906164 chr04:010906164 0 W/10906164-10906164 FN752-S Single Base Substitution C-T INTRON HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN4126-S.SNP.4:10907897 chr04:010907897 0 W/10907897-10907897 FN4126-S SNP C -> T AC=1;AN=182;BQB=0.893526;DP=3061;DP4=1618,1347,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.82289e-07;MQSB=0.979091;RPB=0.40982;SGB=48.6223;VDB=0.87424;EFF=INTRON(MODIFIER||||1670|LOC_Os04g19590|protein_coding|CODING|LOC_Os04g19590.1|2|1) FN2128-S.SNP.4:10908930 chr04:010908930 0 W/10908930-10908930 FN2128-S SNP C -> A AC=2;AN=168;BQB=0.260544;DP=3557;DP4=1441,2050,12,20;HOB=0.0235261;ICB=0.494119;MQ=27;MQ0F=0.17318;MQB=0.943272;MQSB=8.12711e-36;RPB=0.988425;SGB=-191.465;VDB=0.219145;EFF=INTRON(MODIFIER||||1670|LOC_Os04g19590|protein_coding|CODING|LOC_Os04g19590.1|2|1) FN1536-S.SNP.4:10910902 chr04:010910902 0 W/10910902-10910902 FN1536-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN928-S.SNP.4:10910929 chr04:010910929 0 W/10910929-10910929 FN928-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN738-S.SNP.4:10912817 chr04:010912817 0 W/10912817-10912817 FN738-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2706-S.SNP.4:10914823 chr04:010914823 0 W/10914823-10914823 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.985597;DP=6862;DP4=3686,2811,9,12;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.13276;MQB=0.373176;MQSB=0;RPB=0.980422;SGB=39.9056;VDB=0.149167;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1309*|1670|LOC_Os04g19590|protein_coding|CODING|LOC_Os04g19590.1|6|1) FN3692-S.SNP.4:10915869 chr04:010915869 0 W/10915869-10915869 FN3692-S SNP T -> C AC=2;AN=190;BQB=0.967963;DP=2670;DP4=853,1563,7,12;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0314607;MQB=0.468711;MQSB=2.56606e-06;RPB=0.259097;SGB=33.8752;VDB=0.835406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F1658L|1670|LOC_Os04g19590|protein_coding|CODING|LOC_Os04g19590.1|6|1) FN819-S.SNP.4:10919951 chr04:010919951 0 W/10919951-10919951 FN819-S Single Base Substitution G-A STOP_GAINED HET LOC_Os04g19600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3454-S.SNP.4:10922012 chr04:010922012 0 W/10922012-10922012 FN3454-S SNP C -> T AC=2;AN=184;BQB=0.895941;DP=3273;DP4=1386,1814,9,18;HOB=0.0215028;ICB=0.494625;MQ=30;MQ0F=0.0852429;MQB=0.892344;MQSB=0;RPB=0.949247;SGB=85.0529;VDB=0.11006;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E814K|1075|LOC_Os04g19610|protein_coding|CODING|LOC_Os04g19610.1|3|1) FN2676-S.SNP.4:10922076 chr04:010922076 0 W/10922076-10922076 FN2676-S SNP G -> T AC=1;AN=200;BQB=0.908794;DP=4665;DP4=2199,2203,4,9;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0555198;MQB=0.999678;MQSB=3.7284e-26;RPB=0.223883;SGB=36.6644;VDB=0.124591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F792L|1075|LOC_Os04g19610|protein_coding|CODING|LOC_Os04g19610.1|3|1) FN2306.SNP.4:10922429 chr04:010922429 0 W/10922429-10922429 FN2306 SNP C -> A AC=1;AN=192;BQB=0.981554;DP=4707;DP4=2331,2131,5,4;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0214574;MQB=0.416305;MQSB=0.0199942;RPB=0.82209;SGB=8.3993;VDB=0.0322726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D675Y|1075|LOC_Os04g19610|protein_coding|CODING|LOC_Os04g19610.1|3|1) FN2622-S.SNP.4:10923796 chr04:010923796 0 W/10923796-10923796 FN2622-S SNP A -> C AC=1;AN=200;BQB=0.860047;DP=6041;DP4=2767,2790,10,19;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0417149;MQB=0.950818;MQSB=3.56936e-06;RPB=0.30569;SGB=-6.45336;VDB=0.358626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V219G|1075|LOC_Os04g19610|protein_coding|CODING|LOC_Os04g19610.1|3|1) FN714-S.SNP.4:10929263 chr04:010929263 0 W/10929263-10929263 FN714-S Single Base Substitution T-A INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1385-S.SNP.4:10929307 chr04:010929307 0 W/10929307-10929307 FN1385-S Single Base Substitution A-G INTRON HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN570-S.SNP.4:10929556 chr04:010929556 0 W/10929556-10929556 FN570-S Single Base Substitution C-T INTRON HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN1280-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN1280-S Single Base Substitution G-A INTRON HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3729-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.699257;DP=2433;DP4=1299,1016,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35848e-08;MQSB=0.461874;RPB=0.520746;SGB=68.0854;VDB=0.222071;EFF=INTRON(MODIFIER||||625|LOC_Os04g19620|protein_coding|CODING|LOC_Os04g19620.1|2|1) FN4094-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN4094-S SNP G -> A AC=1;AN=182;BQB=0.99942;DP=2685;DP4=1416,1168,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.5087e-06;MQSB=0.598973;RPB=0.703663;SGB=28.6061;VDB=0.165711;EFF=INTRON(MODIFIER||||625|LOC_Os04g19620|protein_coding|CODING|LOC_Os04g19620.1|2|1) FN489-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN489-S Single Base Substitution G-A INTRON HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN926-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN926-S Single Base Substitution G-A INTRON HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN984-S.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 FN984-S Single Base Substitution G-A INTRON HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. W472-5-1.SNP.4:10934008 chr04:010934008 0 W/10934008-10934008 W472-5-1 Single Base Substitution G-A INTRON HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1521-S.SNP.4:10934932 chr04:010934932 0 W/10934932-10934932 FN1521-S Single Base Substitution G-C INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2689-S.SNP.4:10942260 chr04:010942260 0 W/10942260-10942260 FN2689-S SNP A -> T AC=1;AN=200;BQB=0.896872;DP=4866;DP4=2451,2209,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77475e-08;MQSB=0.941462;RPB=0.90476;SGB=63.4749;VDB=0.975195;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.4:10944639 chr04:010944639 0 W/10944639-10944639 FN4304-S SNP T -> A AC=1;AN=170;BQB=0.960913;DP=2682;DP4=1283,1326,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00521999;MQB=8.81556e-06;MQSB=0.863204;RPB=0.679606;SGB=27.9928;VDB=0.387541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.4:10948993 chr04:010948993 0 W/10948993-10948993 FN2734-S SNP G -> T AC=1;AN=200;BQB=0.997759;DP=4843;DP4=2320,2313,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000825934;MQB=1.60052e-06;MQSB=0.309231;RPB=0.610832;SGB=45.0543;VDB=0.950586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.4:10953614 chr04:010953614 0 W/10953614-10953614 FN2742-S SNP T -> A AC=1;AN=200;BQB=0.83746;DP=5385;DP4=2440,2759,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.44571e-10;MQSB=0.628388;RPB=0.276357;SGB=34.6953;VDB=0.211195;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.4:10955230 chr04:010955230 0 W/10955230-10955230 FN628-S Single Base Substitution G-A INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3530-S.SNP.4:10955547 chr04:010955547 0 W/10955547-10955547 FN3530-S SNP A -> G AC=1;AN=188;BQB=0.986448;DP=3038;DP4=1243,1668,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43841e-13;MQSB=0.984567;RPB=0.94634;SGB=43.8792;VDB=0.0535322;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.4:10955733 chr04:010955733 0 W/10955733-10955733 FN692-S Single Base Substitution A-T INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN959-S.SNP.4:10957882 chr04:010957882 0 W/10957882-10957882 FN959-S Single Base Substitution T-C INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1282-S.SNP.4:10961282 chr04:010961282 0 W/10961282-10961282 FN1282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1448-S.SNP.4:10970459 chr04:010970459 0 W/10970459-10970459 FN1448-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g19660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-97.SNP.4:10971921 chr04:010971921 0 W/10971921-10971921 FN-97 Single Base Substitution A-G INTERGENIC HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN4179-S.SNP.4:10976475 chr04:010976475 0 W/10976475-10976475 FN4179-S SNP G -> C AC=1;AN=170;BQB=0.792509;DP=2560;DP4=1230,1238,16,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.20455e-14;MQSB=0.888006;RPB=0.671087;SGB=69.3045;VDB=0.138303;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.4:10983798 chr04:010983798 0 W/10983798-10983798 FN1521-S Single Base Substitution T-G INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN4039-S.SNP.4:10984925 chr04:010984925 0 W/10984925-10984925 FN4039-S SNP G -> T AC=1;AN=168;BQB=0.810629;DP=2605;DP4=1304,1190,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.64389e-06;MQSB=0.988579;RPB=0.905754;SGB=43.3113;VDB=0.561686;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S474*|568|LOC_Os04g19684|protein_coding|CODING|LOC_Os04g19684.1|10|1),STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S313*|407|LOC_Os04g19684|protein_coding|CODING|LOC_Os04g19684.2|7|1) FN1116-S.SNP.4:10990039 chr04:010990039 0 W/10990039-10990039 FN1116-S Single Base Substitution G-T INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1211-S.SNP.4:10992791 chr04:010992791 0 W/10992791-10992791 FN1211-S Single Base Substitution A-G INTRON HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1116-S.SNP.4:10995900 chr04:010995900 0 W/10995900-10995900 FN1116-S Single Base Substitution A-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3399-S.SNP.4:11009690 chr04:011009690 0 W/11009690-11009690 FN3399-S SNP C -> T AC=1;AN=184;BQB=0.908057;DP=2553;DP4=1304,1112,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77133e-05;MQSB=0.954263;RPB=0.997008;SGB=30.6558;VDB=0.424295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.4:11010425 chr04:011010425 0 W/11010425-11010425 FN1033-S Single Base Substitution G-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1038-S.SNP.4:11012717 chr04:011012717 0 W/11012717-11012717 FN1038-S Single Base Substitution C-T INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN2446.SNP.4:11019859 chr04:011019859 0 W/11019859-11019859 FN2446 SNP C -> T AC=1;AN=200;BQB=0.635757;DP=4895;DP4=2714,1928,11,11;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.390807;MQB=0.495864;MQSB=0;RPB=0.90195;SGB=42.5108;VDB=0.87448;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R1534C|1862|LOC_Os04g19720|protein_coding|CODING|LOC_Os04g19720.1|5|1) FN946-S.SNP.4:11020994 chr04:011020994 0 W/11020994-11020994 FN946-S Single Base Substitution C-T INTERGENIC HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN3958-S.SNP.4:11023858 chr04:011023858 0 W/11023858-11023858 FN3958-S SNP G -> A AC=2;AN=168;BQB=0.304435;DP=2487;DP4=1361,1020,21,11;HOB=0.0235261;ICB=0.494119;MQ=24;MQ0F=0.235625;MQB=0.101321;MQSB=0.0710043;RPB=0.269708;SGB=99.9335;VDB=0.449709;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N291|1062|LOC_Os04g19730|protein_coding|CODING|LOC_Os04g19730.1|1|1) FN_N1-202-3.SNP.4:11045091 chr04:011045091 0 W/11045091-11045091 FN_N1-202-3 Single Base Substitution C-A Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2758-S.SNP.4:11046211 chr04:011046211 0 W/11046211-11046211 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.971513;DP=4706;DP4=2080,2275,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.88637e-11;MQSB=0.980135;RPB=0.651885;SGB=58.2954;VDB=0.118098;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.4:11046266 chr04:011046266 0 W/11046266-11046266 FN-132 Single Base Substitution T-C INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN573-S.SNP.4:11046787 chr04:011046787 0 W/11046787-11046787 FN573-S Single Base Substitution A-G INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1346-S.SNP.4:11051361 chr04:011051361 0 W/11051361-11051361 FN1346-S Single Base Substitution G-T INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3354-S.SNP.4:11064400 chr04:011064400 0 W/11064400-11064400 FN3354-S SNP T -> A AC=1;AN=184;BQB=0.898471;DP=3170;DP4=1612,1406,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.95609e-08;MQSB=0.873028;RPB=0.598223;SGB=23.2751;VDB=0.185215;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.4:11068688 chr04:011068688 0 W/11068688-11068688 FN399-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g19820 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1368-S.SNP.4:11077390 chr04:011077390 0 W/11077390-11077390 FN1368-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN856-S.SNP.4:11085661 chr04:011085661 0 W/11085661-11085661 FN856-S Single Base Substitution T-G INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN1731-S.SNP.4:11086174 chr04:011086174 0 W/11086174-11086174 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.783255;DP=3231;DP4=1516,1677,17,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.99249e-11;MQSB=0.975531;RPB=0.876779;SGB=-11.1967;VDB=0.513384;EFF=INTRON(MODIFIER||||232|LOC_Os04g19880|protein_coding|CODING|LOC_Os04g19880.1|1|1) FN2791-S.SNP.4:11089186 chr04:011089186 0 W/11089186-11089186 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.277034;DP=4070;DP4=2168,1582,19,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4966e-10;MQSB=0.9921;RPB=0.955395;SGB=52.7004;VDB=0.139872;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A336V|715|LOC_Os04g19890|protein_coding|CODING|LOC_Os04g19890.1|6|1) FN4128-S.SNP.4:11094614 chr04:011094614 0 W/11094614-11094614 FN4128-S SNP T -> C AC=1;AN=182;BQB=0.878981;DP=2727;DP4=1057,1614,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.89783e-07;MQSB=0.740613;RPB=0.992762;SGB=25.0952;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.4:11095608 chr04:011095608 0 W/11095608-11095608 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.605918;DP=2488;DP4=1131,1276,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00361736;MQB=2.52115e-06;MQSB=0.148283;RPB=0.942063;SGB=68.9144;VDB=0.897062;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.4:11097246 chr04:011097246 0 W/11097246-11097246 FN982-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g19900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3312-S.SNP.4:11104468 chr04:011104468 0 W/11104468-11104468 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.825998;DP=2999;DP4=1365,1529,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.57682e-06;MQSB=0.998238;RPB=0.784175;SGB=53.2642;VDB=0.403098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.4:11105549 chr04:011105549 0 W/11105549-11105549 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.993988;DP=3060;DP4=1632,1318,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00392157;MQB=9.2859e-07;MQSB=0.253178;RPB=0.887101;SGB=35.7479;VDB=0.151085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.4:11108056 chr04:011108056 0 W/11108056-11108056 FN2322 SNP A -> C AC=1;AN=192;BQB=0.953528;DP=5645;DP4=2508,2794,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.64423e-07;MQSB=0.970874;RPB=0.841729;SGB=23.7852;VDB=0.395459;EFF=INTERGENIC(MODIFIER||||||||||1) FN1674-S.SNP.4:11112479 chr04:011112479 0 W/11112479-11112479 FN1674-S SNP G -> A AC=2;AN=188;BQB=0.402502;DP=3960;DP4=1783,2139,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.71901e-11;MQSB=0.905836;RPB=0.582532;SGB=-10.1101;VDB=0.594742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.4:11113325 chr04:011113325 0 W/11113325-11113325 FN3400-S SNP A -> T AC=1;AN=184;BQB=0.345604;DP=3605;DP4=1643,1732,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.34143e-05;MQSB=0.882017;RPB=0.169137;SGB=-15.7576;VDB=0.707795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.4:11114815 chr04:011114815 0 W/11114815-11114815 FN3528-S SNP C -> G AC=1;AN=188;BQB=0.992742;DP=2662;DP4=1313,1273,5,17;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00150263;MQB=2.03133e-07;MQSB=0.134288;RPB=0.444924;SGB=67.8739;VDB=0.12897;EFF=INTRON(MODIFIER||||295|LOC_Os04g19930|protein_coding|CODING|LOC_Os04g19930.1|2|1) FN2403.SNP.4:11115238 chr04:011115238 0 W/11115238-11115238 FN2403 SNP G -> A AC=1;AN=200;BQB=0.19847;DP=4741;DP4=2264,2157,6,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00168741;MQB=0.000787842;MQSB=0.0731052;RPB=0.0779235;SGB=-35.7104;VDB=0.305641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.4:11117085 chr04:011117085 0 W/11117085-11117085 FN1477-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN-394.SNP.4:11117800 chr04:011117800 0 W/11117800-11117800 FN-394 Single Base Substitution C-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3305-S.SNP.4:11118109 chr04:011118109 0 W/11118109-11118109 FN3305-S SNP C -> T AC=1;AN=184;BQB=0.988659;DP=3260;DP4=1807,1377,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40647e-09;MQSB=0.983838;RPB=0.195449;SGB=71.3514;VDB=0.478799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.4:11119938 chr04:011119938 0 W/11119938-11119938 FN1701-S SNP G -> A AC=2;AN=188;BQB=0.00918486;DP=3512;DP4=1762,1699,22,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.86023e-08;MQSB=0.896735;RPB=0.534723;SGB=-268.529;VDB=0.79214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.4:11128261 chr04:011128261 0 W/11128261-11128261 FN2361 SNP T -> C AC=1;AN=192;BQB=0.774436;DP=5135;DP4=2417,2492,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.77014e-08;MQSB=0.898301;RPB=0.194489;SGB=46.9087;VDB=0.0698716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.4:11128363 chr04:011128363 0 W/11128363-11128363 FN2137-S SNP A -> T AC=2;AN=168;BQB=0.298273;DP=4326;DP4=2166,2044,33,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05297e-26;MQSB=0.964254;RPB=0.762838;SGB=-200.829;VDB=0.175162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.4:11128616 chr04:011128616 0 W/11128616-11128616 FN1646-S Single Base Substitution G-C INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN3730-S.SNP.4:11132774 chr04:011132774 0 W/11132774-11132774 FN3730-S SNP C -> T AC=2;AN=190;BQB=0.981126;DP=2907;DP4=1440,1296,25,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90987e-27;MQSB=0.991674;RPB=0.995149;SGB=221.16;VDB=0.736786;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G178S|180|LOC_Os04g19970|protein_coding|CODING|LOC_Os04g19970.1|2|1) FN407-S.SNP.4:11134181 chr04:011134181 0 W/11134181-11134181 FN407-S Single Base Substitution C-T INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1053-S.SNP.4:11138123 chr04:011138123 0 W/11138123-11138123 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2542-S.SNP.4:11138616 chr04:011138616 0 W/11138616-11138616 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.555984;DP=3500;DP4=1342,1941,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.00086e-13;MQSB=0.892183;RPB=0.874781;SGB=65.3149;VDB=0.0921122;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.4:11142254 chr04:011142254 0 W/11142254-11142254 FN530-S Single Base Substitution G-T INTRON HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN-309.SNP.4:11144074 chr04:011144074 0 W/11144074-11144074 FN-309 Single Base Substitution C-T INTRON HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1561-S.SNP.4:11145129 chr04:011145129 0 W/11145129-11145129 FN1561-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g19990 retrotransposon protein, putative, unclassified, expressed SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN955-S.SNP.4:11145479 chr04:011145479 0 W/11145479-11145479 FN955-S Single Base Substitution T-A INTRON HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN3858-S.SNP.4:11147939 chr04:011147939 0 W/11147939-11147939 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.712555;DP=2446;DP4=1210,1146,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00163532;MQB=3.90259e-05;MQSB=0.458907;RPB=0.989577;SGB=30.704;VDB=0.885039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.4:11148033 chr04:011148033 0 W/11148033-11148033 FN1522-S Single Base Substitution C-T INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN2139-S.SNP.4:11148033 chr04:011148033 0 W/11148033-11148033 FN2139-S SNP C -> T AC=2;AN=168;BQB=0.999943;DP=3675;DP4=1612,1986,25,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00217687;MQB=2.40099e-22;MQSB=0.543347;RPB=0.807253;SGB=-54.8729;VDB=0.214147;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.4:11148033 chr04:011148033 0 W/11148033-11148033 FN320-S Single Base Substitution C-T INTERGENIC HOMO SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3824-S.SNP.4:11148033 chr04:011148033 0 W/11148033-11148033 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.512936;DP=2627;DP4=1271,1275,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00228397;MQB=9.35262e-07;MQSB=0.920283;RPB=0.986009;SGB=39.6545;VDB=0.500099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.4:11149944 chr04:011149944 0 W/11149944-11149944 FN2462 SNP T -> A AC=2;AN=200;BQB=0.967217;DP=4615;DP4=2218,2109,25,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05885e-29;MQSB=0.990823;RPB=0.88027;SGB=62.4605;VDB=0.158366;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.4:11150609 chr04:011150609 0 W/11150609-11150609 FN3372-S SNP G -> T AC=1;AN=184;BQB=0.795868;DP=3306;DP4=1831,1330,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11903e-06;MQSB=0.934531;RPB=0.695895;SGB=13.188;VDB=0.242386;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.4:11152782 chr04:011152782 0 W/11152782-11152782 FN2665-S SNP G -> T AC=1;AN=200;BQB=0.756789;DP=4625;DP4=2074,2308,20,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0207568;MQB=9.31464e-16;MQSB=0.998283;RPB=0.627339;SGB=108.768;VDB=0.0410926;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.4:11152818 chr04:011152818 0 W/11152818-11152818 FN2438 SNP G -> A AC=1;AN=200;BQB=0.819612;DP=3858;DP4=1574,2052,4,6;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.029549;MQB=0.00575638;MQSB=0.134339;RPB=0.993656;SGB=40.4492;VDB=0.910125;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.4:11153266 chr04:011153266 0 W/11153266-11153266 FN434-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g20010 retrotransposon protein, putative, unclassified, expressed SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN2330.SNP.4:11153939 chr04:011153939 0 W/11153939-11153939 FN2330 SNP G -> A AC=1;AN=192;BQB=0.610775;DP=8007;DP4=3945,3381,15,16;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0167354;MQB=9.60477e-07;MQSB=6.14561e-29;RPB=0.997871;SGB=64.8148;VDB=0.0498754;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V364|808|LOC_Os04g20010|protein_coding|CODING|LOC_Os04g20010.1|1|1) FN2330.SNP.4:11153940 chr04:011153940 0 W/11153940-11153940 FN2330 SNP C -> A AC=1;AN=192;BQB=0.091836;DP=7982;DP4=3941,3409,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0172889;MQB=3.93935e-05;MQSB=2.94038e-32;RPB=0.568739;SGB=-4.61041;VDB=0.0764726;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R365|808|LOC_Os04g20010|protein_coding|CODING|LOC_Os04g20010.1|1|1) FN3978-S.SNP.4:11156076 chr04:011156076 0 W/11156076-11156076 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.835902;DP=1464;DP4=846,539,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0218579;MQB=0.129499;MQSB=0.924645;RPB=0.92231;SGB=24.4556;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN4154-S.SNP.4:11156076 chr04:011156076 0 W/11156076-11156076 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.163388;DP=1879;DP4=1081,720,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0271421;MQB=0.0012873;MQSB=0.0477892;RPB=0.118254;SGB=52.3148;VDB=0.848948;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.4:11160376 chr04:011160376 0 W/11160376-11160376 FN1257-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g20030 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2470.SNP.4:11163103 chr04:011163103 0 W/11163103-11163103 FN2470 SNP C -> T AC=1;AN=200;BQB=0.930567;DP=5014;DP4=2250,2411,13,22;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0259274;MQB=0.484417;MQSB=0.28809;RPB=0.999705;SGB=76.378;VDB=0.480472;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.4:11165765 chr04:011165765 0 W/11165765-11165765 FN4128-S SNP C -> T AC=1;AN=182;BQB=0.930251;DP=3367;DP4=1823,1477,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=31;MQ0F=0.170478;MQB=0.534614;MQSB=3.09027e-26;RPB=0.414161;SGB=30.5793;VDB=0.21899;EFF=INTRON(MODIFIER||||1134|LOC_Os04g20040|protein_coding|CODING|LOC_Os04g20040.1|2|1) FN3712-S.SNP.4:11170695 chr04:011170695 0 W/11170695-11170695 FN3712-S SNP T -> C AC=1;AN=190;BQB=0.990098;DP=2806;DP4=1215,1485,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.255524;MQB=0.843034;MQSB=0;RPB=0.15074;SGB=28.9929;VDB=0.227606;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.4:11172300 chr04:011172300 0 W/11172300-11172300 FN3790-S SNP C -> A AC=2;AN=190;BQB=0.602151;DP=3125;DP4=1279,1740,9,27;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.04224;MQB=0.791885;MQSB=1.29932e-14;RPB=0.897318;SGB=158.388;VDB=0.884342;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G788|1004|LOC_Os04g20054|protein_coding|CODING|LOC_Os04g20054.1|3|1) FN2358.SNP.4:11174674 chr04:011174674 0 W/11174674-11174674 FN2358 SNP C -> G AC=1;AN=192;BQB=0.992262;DP=4750;DP4=2258,2166,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00547368;MQB=6.23789e-10;MQSB=0.323003;RPB=0.909434;SGB=44.3;VDB=0.0995169;EFF=INTRON(MODIFIER||||1004|LOC_Os04g20054|protein_coding|CODING|LOC_Os04g20054.1|1|1) FN2295.SNP.4:11176508 chr04:011176508 0 W/11176508-11176508 FN2295 SNP G -> A AC=1;AN=192;BQB=0.609118;DP=4615;DP4=2232,2159,18,13;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.092091;MQB=0.973695;MQSB=0;RPB=0.972686;SGB=64.8148;VDB=0.452733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.4:11176669 chr04:011176669 0 W/11176669-11176669 FN2299 SNP G -> C AC=1;AN=192;BQB=0.999273;DP=4805;DP4=2573,1991,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0112383;MQB=0.0123917;MQSB=9.30446e-28;RPB=0.948667;SGB=57.6018;VDB=0.891462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.4:11182404 chr04:011182404 0 W/11182404-11182404 FN1546-S Single Base Substitution C-G INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN2707-S.SNP.4:11183593 chr04:011183593 0 W/11183593-11183593 FN2707-S SNP A -> T AC=1;AN=200;BQB=0.268891;DP=5127;DP4=2597,2327,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96453e-12;MQSB=0.955839;RPB=0.956305;SGB=14.3054;VDB=0.571069;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.4:11191707 chr04:011191707 0 W/11191707-11191707 FN591-S Single Base Substitution A-G INTRON HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN3542-S.SNP.4:11200415 chr04:011200415 0 W/11200415-11200415 FN3542-S SNP C -> T AC=1;AN=188;BQB=0.717868;DP=3049;DP4=1591,1393,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000248474;MQSB=0.988562;RPB=0.350352;SGB=25.3545;VDB=0.866967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.4:11200759 chr04:011200759 0 W/11200759-11200759 FN1551-S Single Base Substitution C-A INTERGENIC Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1758-S.SNP.4:11201390 chr04:011201390 0 W/11201390-11201390 FN1758-S SNP C -> A AC=1;AN=188;BQB=0.293365;DP=3419;DP4=2010,1373,17,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000292483;MQB=2.43396e-10;MQSB=0.98395;RPB=0.54048;SGB=-9.02352;VDB=0.750238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.4:11205109 chr04:011205109 0 W/11205109-11205109 FN1546-S Single Base Substitution G-C INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN-303.SNP.4:11210330 chr04:011210330 0 W/11210330-11210330 FN-303 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g20120 retrotransposon protein, putative, unclassified, expressed SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-148.SNP.4:11214251 chr04:011214251 0 W/11214251-11214251 FN-148 Single Base Substitution A-G INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2434.SNP.4:11216663 chr04:011216663 0 W/11216663-11216663 FN2434 SNP C -> T AC=1;AN=200;BQB=0.774234;DP=4447;DP4=2243,1951,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.72697e-07;MQSB=0.922531;RPB=0.104662;SGB=36.6644;VDB=0.675449;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.4:11217372 chr04:011217372 0 W/11217372-11217372 W721-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2122-S.SNP.4:11218635 chr04:011218635 0 W/11218635-11218635 FN2122-S SNP G -> T AC=1;AN=168;BQB=0.0211899;DP=3961;DP4=1918,1975,39,17;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00353446;MQB=1.73213e-33;MQSB=0.687399;RPB=0.913772;SGB=-1751.32;VDB=0.000287533;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.4:11220265 chr04:011220265 0 W/11220265-11220265 FN621-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN1759-S.SNP.4:11221577 chr04:011221577 0 W/11221577-11221577 FN1759-S SNP T -> G AC=1;AN=188;BQB=0.833121;DP=3172;DP4=1494,1632,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000945776;MQB=8.52143e-10;MQSB=0.949175;RPB=0.768232;SGB=57.244;VDB=0.423896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V676G|791|LOC_Os04g20140|protein_coding|CODING|LOC_Os04g20140.1|3|1) FN569-S.SNP.4:11227300 chr04:011227300 0 W/11227300-11227300 FN569-S Single Base Substitution G-T INTERGENIC HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN2740-S.SNP.4:11227539 chr04:011227539 0 W/11227539-11227539 FN2740-S SNP A -> G AC=1;AN=200;BQB=0.436016;DP=4866;DP4=2411,2266,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97923e-10;MQSB=0.940005;RPB=0.960217;SGB=77.2904;VDB=0.870222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.4:11234513 chr04:011234513 0 W/11234513-11234513 FN2304 SNP T -> A AC=1;AN=192;BQB=0.866677;DP=4807;DP4=2133,2258,19,18;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0264198;MQB=0.247535;MQSB=0.7826;RPB=0.515913;SGB=38.6418;VDB=0.371622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.4:11248828 chr04:011248828 0 W/11248828-11248828 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.684146;DP=2753;DP4=1326,1340,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.56666e-05;MQSB=0.999908;RPB=0.598408;SGB=13.4442;VDB=0.194065;EFF=INTRON(MODIFIER||||376|LOC_Os04g20180|protein_coding|CODING|LOC_Os04g20180.1|1|1) FN2089-S.SNP.4:11259112 chr04:011259112 0 W/11259112-11259112 FN2089-S SNP C -> T AC=2;AN=168;BQB=0.735906;DP=4173;DP4=1947,2149,20,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.82602e-22;MQSB=0.94078;RPB=0.897452;SGB=44.2536;VDB=0.213702;EFF=INTRON(MODIFIER||||170|LOC_Os04g20200|protein_coding|CODING|LOC_Os04g20200.1|2|1) FN534-S.SNP.4:11264720 chr04:011264720 0 W/11264720-11264720 FN534-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN-386.SNP.4:11267763 chr04:011267763 0 W/11267763-11267763 FN-386 Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1070-S.SNP.4:11267763 chr04:011267763 0 W/11267763-11267763 FN1070-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1688-S.SNP.4:11267763 chr04:011267763 0 W/11267763-11267763 FN1688-S SNP T -> A AC=1;AN=188;BQB=0.0245383;DP=2614;DP4=960,1612,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.7366e-08;MQSB=0.651522;RPB=0.999748;SGB=33.7061;VDB=0.326743;EFF=UTR_5_PRIME(MODIFIER||586||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.1|3|1),UTR_5_PRIME(MODIFIER||586||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.2|2|1) FN3849-S.SNP.4:11267763 chr04:011267763 0 W/11267763-11267763 FN3849-S SNP T -> A AC=2;AN=158;BQB=0.882051;DP=2299;DP4=1139,1057,16,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.44545e-16;MQSB=0.978993;RPB=0.994829;SGB=121.348;VDB=0.887211;EFF=UTR_5_PRIME(MODIFIER||586||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.1|3|1),UTR_5_PRIME(MODIFIER||586||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.2|2|1) FN3534-S.SNP.4:11269014 chr04:011269014 0 W/11269014-11269014 FN3534-S SNP G -> T AC=1;AN=188;BQB=0.104868;DP=3302;DP4=1846,1374,11,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00190623;MQSB=0.844283;RPB=0.999943;SGB=18.4463;VDB=0.62773;EFF=START_GAINED(LOW||||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.1|3|1),START_GAINED(LOW||||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.2|2|1),UTR_5_PRIME(MODIFIER||1837||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.1|3|1),UTR_5_PRIME(MODIFIER||1837||143|LOC_Os04g20210|protein_coding|CODING|LOC_Os04g20210.2|2|1) FN3421-S.SNP.4:11276130 chr04:011276130 0 W/11276130-11276130 FN3421-S SNP A -> C AC=1;AN=184;BQB=0.981342;DP=1546;DP4=738,724,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000646831;MQB=0.00279815;MQSB=0.15077;RPB=0.525786;SGB=10.6662;VDB=0.113645;EFF=INTRON(MODIFIER||||547|LOC_Os04g20220|protein_coding|CODING|LOC_Os04g20220.1|3|1) FN3801-S.SNP.4:11280622 chr04:011280622 0 W/11280622-11280622 FN3801-S SNP C -> T AC=1;AN=190;BQB=0.980509;DP=2376;DP4=1014,1185,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.4404e-10;MQSB=0.973114;RPB=0.992104;SGB=80.9724;VDB=0.810402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R233C|547|LOC_Os04g20220|protein_coding|CODING|LOC_Os04g20220.1|8|1) FN2295.SNP.4:11285821 chr04:011285821 0 W/11285821-11285821 FN2295 SNP T -> A AC=1;AN=192;BQB=0.359987;DP=4217;DP4=2654,1319,18,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.21385e-13;MQSB=0.816735;RPB=0.977788;SGB=94.8539;VDB=0.680467;EFF=INTRON(MODIFIER||||547|LOC_Os04g20220|protein_coding|CODING|LOC_Os04g20220.1|15|1) FN2388.SNP.4:11286342 chr04:011286342 0 W/11286342-11286342 FN2388 SNP G -> T AC=1;AN=200;BQB=0.251877;DP=4839;DP4=2223,2313,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.2078e-07;MQSB=0.999048;RPB=0.573999;SGB=21.6694;VDB=0.752013;EFF=UTR_3_PRIME(MODIFIER||412||547|LOC_Os04g20220|protein_coding|CODING|LOC_Os04g20220.1|17|1) FN1129-S.SNP.4:11292823 chr04:011292823 0 W/11292823-11292823 FN1129-S Single Base Substitution T-C INTRON HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN3815-S.SNP.4:11296381 chr04:011296381 0 W/11296381-11296381 FN3815-S SNP A -> G AC=1;AN=190;BQB=0.985779;DP=3087;DP4=1235,1697,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000323939;MQB=4.35545e-06;MQSB=0.995684;RPB=0.44105;SGB=35.4339;VDB=0.100903;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.4:11297089 chr04:011297089 0 W/11297089-11297089 W500-4-7-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g20240 retrotransposon protein, putative, unclassified, expressed SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN916-S.SNP.4:11297100 chr04:011297100 0 W/11297100-11297100 FN916-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g20240 retrotransposon protein, putative, unclassified, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3637-S.SNP.4:11322481 chr04:011322481 0 W/11322481-11322481 FN3637-S SNP C -> T AC=1;AN=190;BQB=0.940867;DP=3044;DP4=1502,1437,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19498e-05;MQSB=0.98459;RPB=0.946016;SGB=25.439;VDB=0.551648;EFF=INTRON(MODIFIER||||483|LOC_Os04g20270|protein_coding|CODING|LOC_Os04g20270.1|8|1),INTRON(MODIFIER||||483|LOC_Os04g20270|protein_coding|CODING|LOC_Os04g20270.2|8|1) FN2318.SNP.4:11328162 chr04:011328162 0 W/11328162-11328162 FN2318 SNP A -> T AC=2;AN=192;BQB=0.71615;DP=4497;DP4=2030,2112,16,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.68747e-17;MQSB=0.817813;RPB=0.19123;SGB=64.8148;VDB=0.0261978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V18D|483|LOC_Os04g20270|protein_coding|CODING|LOC_Os04g20270.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V18D|483|LOC_Os04g20270|protein_coding|CODING|LOC_Os04g20270.1|2|1) FN2549-S.SNP.4:11333499 chr04:011333499 0 W/11333499-11333499 FN2549-S SNP C -> A AC=1;AN=198;BQB=0.279736;DP=4113;DP4=2121,1832,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17346e-06;MQSB=0.830679;RPB=0.325958;SGB=18.9639;VDB=0.789643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.4:11336994 chr04:011336994 0 W/11336994-11336994 FN3339-S SNP A -> G AC=2;AN=184;BQB=0.644474;DP=3213;DP4=1554,1543,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.0601e-12;MQSB=0.996215;RPB=0.741113;SGB=74.4875;VDB=0.119908;EFF=INTRON(MODIFIER||||221|LOC_Os04g20280|protein_coding|CODING|LOC_Os04g20280.1|4|1),INTRON(MODIFIER||||227|LOC_Os04g20280|protein_coding|CODING|LOC_Os04g20280.2|4|1) FN2151-S.SNP.4:11339248 chr04:011339248 0 W/11339248-11339248 FN2151-S SNP G -> T AC=2;AN=168;BQB=0.0119821;DP=4136;DP4=2125,1938,27,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20411e-22;MQSB=0.99937;RPB=0.975629;SGB=-108.867;VDB=0.80747;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.4:11339432 chr04:011339432 0 W/11339432-11339432 FN3715-S SNP T -> A AC=1;AN=190;BQB=0.87198;DP=2812;DP4=1284,1333,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90736e-07;MQSB=0.949656;RPB=0.903561;SGB=28.9929;VDB=0.348281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.4:11340613 chr04:011340613 0 W/11340613-11340613 FN3357-S SNP A -> G AC=2;AN=184;BQB=0.996424;DP=2141;DP4=909,1102,4,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000467071;MQB=1.07897e-08;MQSB=0.00977176;RPB=0.635962;SGB=71.3514;VDB=0.620184;EFF=INTERGENIC(MODIFIER||||||||||1) FN-193.SNP.4:11344130 chr04:011344130 0 W/11344130-11344130 FN-193 Single Base Substitution C-A INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN3360-S.SNP.4:11349806 chr04:011349806 0 W/11349806-11349806 FN3360-S SNP C -> G AC=1;AN=184;BQB=0.86355;DP=2851;DP4=1487,1268,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20955e-10;MQSB=0.99483;RPB=0.431201;SGB=63.9222;VDB=0.0457007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.4:11351246 chr04:011351246 0 W/11351246-11351246 FN2195-S SNP T -> A AC=2;AN=190;BQB=0.376371;DP=5003;DP4=2372,2242,17,25;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00019988;MQB=7.59183e-21;MQSB=0.353191;RPB=0.999115;SGB=92.6144;VDB=0.543483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.4:11354395 chr04:011354395 0 W/11354395-11354395 FN2337 SNP G -> T AC=1;AN=192;BQB=0.729412;DP=5185;DP4=2439,2475,9,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.78878e-13;MQSB=0.791945;RPB=0.241944;SGB=-71.6791;VDB=0.0874583;EFF=INTERGENIC(MODIFIER||||||||||1) FN726-S.SNP.4:11360806 chr04:011360806 0 W/11360806-11360806 FN726-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g20310 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2107-S.SNP.4:11362554 chr04:011362554 0 W/11362554-11362554 FN2107-S SNP G -> A AC=1;AN=168;BQB=0.0179344;DP=1767;DP4=980,730,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00355607;MQSB=2.5939e-08;RPB=0.938996;SGB=-16.665;VDB=0.96082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.4:11362765 chr04:011362765 0 W/11362765-11362765 FN2407 SNP C -> A AC=1;AN=200;BQB=0.999967;DP=4568;DP4=2108,2230,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50982e-11;MQSB=0.755818;RPB=0.987282;SGB=91.1059;VDB=0.472604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.4:11366089 chr04:011366089 0 W/11366089-11366089 FN2690-S SNP G -> T AC=1;AN=200;BQB=0.924827;DP=4859;DP4=2240,2402,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.04743e-14;MQSB=0.999847;RPB=0.649137;SGB=69.1109;VDB=0.218332;EFF=INTRON(MODIFIER||||371|LOC_Os04g20320|protein_coding|CODING|LOC_Os04g20320.1|2|1) FN4234-S.SNP.4:11368023 chr04:011368023 0 W/11368023-11368023 FN4234-S SNP T -> A AC=1;AN=170;BQB=0.998125;DP=2598;DP4=1319,1180,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.30592e-08;MQSB=0.913652;RPB=0.212602;SGB=14.9986;VDB=0.0838289;EFF=INTRON(MODIFIER||||371|LOC_Os04g20320|protein_coding|CODING|LOC_Os04g20320.1|2|1) FN2429.SNP.4:11369687 chr04:011369687 0 W/11369687-11369687 FN2429 SNP A -> G AC=2;AN=200;BQB=0.183431;DP=4595;DP4=1876,2305,26,29;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000217628;MQB=1.11277e-13;MQSB=0.759413;RPB=0.155482;SGB=188.082;VDB=0.188469;EFF=INTRON(MODIFIER||||371|LOC_Os04g20320|protein_coding|CODING|LOC_Os04g20320.1|4|1) FN1249-S.SNP.4:11370510 chr04:011370510 0 W/11370510-11370510 FN1249-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g20320 retrotransposon protein, putative, unclassified, expressed SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN1249-S.SNP.4:11370513 chr04:011370513 0 W/11370513-11370513 FN1249-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g20320 retrotransposon protein, putative, unclassified, expressed SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2297.SNP.4:11371380 chr04:011371380 0 W/11371380-11371380 FN2297 SNP A -> G AC=1;AN=192;BQB=0.952985;DP=4363;DP4=2032,1796,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.93401e-06;MQSB=0.950609;RPB=0.400687;SGB=-0.466926;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.4:11372906 chr04:011372906 0 W/11372906-11372906 FN2662-S SNP A -> T AC=1;AN=200;BQB=0.91442;DP=4767;DP4=2174,2363,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0016782;MQB=1.2241e-15;MQSB=0.924413;RPB=0.8978;SGB=79.9264;VDB=0.0533556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.4:11374684 chr04:011374684 0 W/11374684-11374684 FN1064-S Single Base Substitution A-G INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2235-S.SNP.4:11391316 chr04:011391316 0 W/11391316-11391316 FN2235-S SNP C -> T AC=1;AN=190;BQB=0.963578;DP=4186;DP4=1982,1943,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000238892;MQB=1.64487e-07;MQSB=0.140417;RPB=0.694593;SGB=-14.3297;VDB=0.649589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.4:11391338 chr04:011391338 0 W/11391338-11391338 FN2235-S SNP C -> G AC=1;AN=190;BQB=0.606993;DP=4134;DP4=1961,1941,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000241896;MQB=2.75222e-09;MQSB=0.0190632;RPB=0.828819;SGB=46.7622;VDB=0.143545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.4:11397985 chr04:011397985 0 W/11397985-11397985 FN2195-S SNP G -> A AC=2;AN=190;BQB=0.952003;DP=2549;DP4=960,1355,3,5;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0121616;MQB=0.00236134;MQSB=6.69631e-09;RPB=0.568903;SGB=30.8803;VDB=0.0655916;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.4:11405777 chr04:011405777 0 W/11405777-11405777 FN-221 Single Base Substitution G-A INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN1600-S.SNP.4:11407943 chr04:011407943 0 W/11407943-11407943 FN1600-S Single Base Substitution G-T INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1073-S.SNP.4:11416897 chr04:011416897 0 W/11416897-11416897 FN1073-S Single Base Substitution C-T INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN4167-S.SNP.4:11417209 chr04:011417209 0 W/11417209-11417209 FN4167-S SNP C -> T AC=2;AN=170;BQB=0.988031;DP=2000;DP4=1042,894,15,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=3.73206e-08;MQSB=1.42419e-06;RPB=0.566181;SGB=96.7413;VDB=0.436864;EFF=INTRON(MODIFIER||||95|LOC_Os04g20410|protein_coding|CODING|LOC_Os04g20410.1|1|1) FN2600-S.SNP.4:11417647 chr04:011417647 0 W/11417647-11417647 FN2600-S SNP A -> T AC=1;AN=198;BQB=0.965935;DP=4275;DP4=2283,1812,13,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.63775e-11;MQSB=0.949617;RPB=0.999387;SGB=54.5295;VDB=0.143887;EFF=INTRON(MODIFIER||||95|LOC_Os04g20410|protein_coding|CODING|LOC_Os04g20410.1|1|1) FN1297-S.SNP.4:11420221 chr04:011420221 0 W/11420221-11420221 FN1297-S Single Base Substitution C-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN864-S.SNP.4:11421381 chr04:011421381 0 W/11421381-11421381 FN864-S Single Base Substitution T-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN437-S.SNP.4:11422465 chr04:011422465 0 W/11422465-11422465 FN437-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN-146.SNP.4:11425293 chr04:011425293 0 W/11425293-11425293 FN-146 Single Base Substitution T-A INTERGENIC HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN976-S.SNP.4:11429461 chr04:011429461 0 W/11429461-11429461 FN976-S Single Base Substitution A-T INTRON HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN-146.SNP.4:11430733 chr04:011430733 0 W/11430733-11430733 FN-146 Single Base Substitution A-T INTERGENIC HOMO SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3517-S.SNP.4:11432482 chr04:011432482 0 W/11432482-11432482 FN3517-S SNP A -> C AC=2;AN=188;BQB=0.905969;DP=3234;DP4=1372,1723,18,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.35962e-22;MQSB=0.871036;RPB=0.717869;SGB=124.567;VDB=0.1484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.4:11432790 chr04:011432790 0 W/11432790-11432790 FN3910-S SNP G -> A AC=1;AN=158;BQB=0.986991;DP=2639;DP4=1255,1242,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.66701e-12;MQSB=0.934437;RPB=0.51719;SGB=54.2901;VDB=0.711627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.4:11446518 chr04:011446518 0 W/11446518-11446518 FN1040-S Single Base Substitution T-C INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN4099-S.SNP.4:11451413 chr04:011451413 0 W/11451413-11451413 FN4099-S SNP T -> A AC=1;AN=182;BQB=0.981225;DP=2810;DP4=1427,1315,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.38747e-11;MQSB=0.774313;RPB=0.933523;SGB=71.1765;VDB=0.610216;EFF=UTR_5_PRIME(MODIFIER||2757||487|LOC_Os04g20474|protein_coding|CODING|LOC_Os04g20474.3|1|1),INTRON(MODIFIER||||487|LOC_Os04g20474|protein_coding|CODING|LOC_Os04g20474.2|1|1),INTRON(MODIFIER||||487|LOC_Os04g20474|protein_coding|CODING|LOC_Os04g20474.4|1|1),INTRON(MODIFIER||||487|LOC_Os04g20474|protein_coding|CODING|LOC_Os04g20474.1|2|1) FN408-S.SNP.4:11454957 chr04:011454957 0 W/11454957-11454957 FN408-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g20474 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN3382-S.SNP.4:11456270 chr04:011456270 0 W/11456270-11456270 FN3382-S SNP C -> A AC=1;AN=184;BQB=0.949014;DP=2837;DP4=1378,1376,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.2429e-05;MQSB=0.766752;RPB=0.713935;SGB=35.1773;VDB=0.414654;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.4:11458047 chr04:011458047 0 W/11458047-11458047 FN1109-S Single Base Substitution T-G INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3357-S.SNP.4:11462650 chr04:011462650 0 W/11462650-11462650 FN3357-S SNP A -> G AC=2;AN=184;BQB=0.988254;DP=2705;DP4=1369,1201,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.88403e-14;MQSB=0.954869;RPB=0.846179;SGB=43.4494;VDB=0.129711;EFF=INTRON(MODIFIER||||234|LOC_Os04g20510|protein_coding|CODING|LOC_Os04g20510.1|1|1) FN4084-S.SNP.4:11479157 chr04:011479157 0 W/11479157-11479157 FN4084-S SNP G -> A AC=1;AN=182;BQB=0.686314;DP=2593;DP4=1109,1389,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.84823e-06;MQSB=0.996056;RPB=0.595876;SGB=42.6494;VDB=0.220923;EFF=INTRON(MODIFIER||||383|LOC_Os04g20560|protein_coding|CODING|LOC_Os04g20560.1|7|1),INTRON(MODIFIER||||371|LOC_Os04g20560|protein_coding|CODING|LOC_Os04g20560.2|7|1) FN2378.SNP.4:11480130 chr04:011480130 0 W/11480130-11480130 FN2378 SNP A -> T AC=2;AN=192;BQB=0.930222;DP=5346;DP4=2664,2413,45,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000187056;MQB=1.35276e-40;MQSB=0.999287;RPB=0.994829;SGB=264.922;VDB=0.573021;EFF=INTRON(MODIFIER||||383|LOC_Os04g20560|protein_coding|CODING|LOC_Os04g20560.1|7|1),INTRON(MODIFIER||||371|LOC_Os04g20560|protein_coding|CODING|LOC_Os04g20560.2|7|1) FN1731-S.SNP.4:11500778 chr04:011500778 0 W/11500778-11500778 FN1731-S SNP C -> T AC=1;AN=188;BQB=0.939989;DP=2332;DP4=1209,1058,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.91355e-07;MQSB=0.999949;RPB=0.764247;SGB=-13.3699;VDB=0.960485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.4:11504482 chr04:011504482 0 W/11504482-11504482 FN3473-S SNP A -> T AC=2;AN=184;BQB=0.885741;DP=2441;DP4=1182,1200,9,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.41204e-11;MQSB=0.888722;RPB=0.69073;SGB=84.9167;VDB=0.114885;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.4:11508807 chr04:011508807 0 W/11508807-11508807 FN533-S Single Base Substitution G-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2428.SNP.4:11518643 chr04:011518643 0 W/11518643-11518643 FN2428 SNP A -> G AC=1;AN=200;BQB=0.522662;DP=4854;DP4=2324,2252,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77088e-12;MQSB=0.96076;RPB=0.823611;SGB=81.8956;VDB=0.620188;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.4:11525328 chr04:011525328 0 W/11525328-11525328 FN_798-4-2 Single Base Substitution T-C Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN4134-S.SNP.4:11534882 chr04:011534882 0 W/11534882-11534882 FN4134-S SNP A -> C AC=1;AN=182;BQB=0.997581;DP=3139;DP4=1434,1581,11,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.18362e-11;MQSB=0.982307;RPB=0.842051;SGB=28.1658;VDB=0.718646;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caG|H97Q|323|LOC_Os04g20610|protein_coding|CODING|LOC_Os04g20610.1|3|1) FN3464-S.SNP.4:11535953 chr04:011535953 0 W/11535953-11535953 FN3464-S SNP T -> C AC=2;AN=184;BQB=0.946871;DP=3781;DP4=1692,1961,22,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.93837e-21;MQSB=0.909654;RPB=0.146488;SGB=148.222;VDB=0.551369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H68R|323|LOC_Os04g20610|protein_coding|CODING|LOC_Os04g20610.1|2|1),SPLICE_SITE_REGION(LOW||||323|LOC_Os04g20610|protein_coding|CODING|LOC_Os04g20610.1|2|1) FN3293-S.SNP.4:11536277 chr04:011536277 0 W/11536277-11536277 FN3293-S SNP T -> C AC=1;AN=184;BQB=0.991065;DP=3543;DP4=1638,1793,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31226e-14;MQSB=0.992672;RPB=0.689021;SGB=48.493;VDB=0.485596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q64R|323|LOC_Os04g20610|protein_coding|CODING|LOC_Os04g20610.1|1|1) FN1018-S.SNP.4:11559579 chr04:011559579 0 W/11559579-11559579 FN1018-S Single Base Substitution T-G INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1018-S.SNP.4:11559580 chr04:011559580 0 W/11559580-11559580 FN1018-S Single Base Substitution C-A INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN3374-S.SNP.4:11564256 chr04:011564256 0 W/11564256-11564256 FN3374-S SNP C -> T AC=1;AN=184;BQB=0.993835;DP=3113;DP4=1258,1758,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00353357;MQB=0.000162412;MQSB=0.326693;RPB=0.225646;SGB=62.3078;VDB=0.445855;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.4:11567074 chr04:011567074 0 W/11567074-11567074 FN4206-S SNP G -> A AC=1;AN=170;BQB=0.999946;DP=2309;DP4=1124,1074,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.54496e-10;MQSB=0.985488;RPB=0.61104;SGB=52.0913;VDB=0.254512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R11C|124|LOC_Os04g20670|protein_coding|CODING|LOC_Os04g20670.1|1|1) FN2112-S.SNP.4:11568724 chr04:011568724 0 W/11568724-11568724 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.5336;DP=3628;DP4=1947,1644,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08338e-06;MQSB=0.980934;RPB=0.956428;SGB=5.62151;VDB=0.284068;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.4:11568832 chr04:011568832 0 W/11568832-11568832 FN4275-S SNP A -> G AC=1;AN=170;BQB=0.986665;DP=2479;DP4=1392,1036,5,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.36258e-09;MQSB=0.947084;RPB=0.893299;SGB=45.206;VDB=0.650735;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.4:11570997 chr04:011570997 0 W/11570997-11570997 FN323-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g20680 wall-associated receptor kinase 3 precursor, putative, expressed SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2322.SNP.4:11573193 chr04:011573193 0 W/11573193-11573193 FN2322 SNP A -> G AC=1;AN=192;BQB=0.997406;DP=5248;DP4=2375,2659,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.53062e-08;MQSB=0.816068;RPB=0.133008;SGB=21.2209;VDB=0.00314743;EFF=INTRON(MODIFIER||||773|LOC_Os04g20680|protein_coding|CODING|LOC_Os04g20680.1|1|1) FN772-S.SNP.4:11578398 chr04:011578398 0 W/11578398-11578398 FN772-S Single Base Substitution G-A INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2332.SNP.4:11582135 chr04:011582135 0 W/11582135-11582135 FN2332 SNP C -> T AC=1;AN=192;BQB=0.564668;DP=5137;DP4=2200,2489,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.71308e-08;MQSB=0.994821;RPB=0.311315;SGB=-13.0756;VDB=0.728917;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.4:11583808 chr04:011583808 0 W/11583808-11583808 FN4002-S SNP T -> A AC=1;AN=168;BQB=0.30261;DP=2523;DP4=1217,1189,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.99722e-09;MQSB=0.994025;RPB=0.996704;SGB=34.3388;VDB=0.128712;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.4:11585015 chr04:011585015 0 W/11585015-11585015 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.865832;DP=3356;DP4=1627,1669,18,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77054e-16;MQSB=0.925134;RPB=0.989849;SGB=-86.6665;VDB=0.0809738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.4:11586799 chr04:011586799 0 W/11586799-11586799 FN3549-S SNP A -> C AC=1;AN=188;BQB=0.973508;DP=4109;DP4=1676,2132,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0675e-14;MQSB=0.98113;RPB=0.99951;SGB=43.8792;VDB=0.0389545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.4:11591986 chr04:011591986 0 W/11591986-11591986 FN2353 SNP T -> A AC=2;AN=192;BQB=0.810637;DP=5064;DP4=1904,2904,12,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.21964e-21;MQSB=0.837829;RPB=0.990194;SGB=98.1513;VDB=0.672607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.4:11592522 chr04:011592522 0 W/11592522-11592522 FN2629-S SNP A -> T AC=1;AN=200;BQB=0.65566;DP=5106;DP4=2455,2444,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.79968e-14;MQSB=0.875135;RPB=0.464389;SGB=76.3213;VDB=0.680314;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.4:11595927 chr04:011595927 0 W/11595927-11595927 FN438-S Single Base Substitution C-G INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN-76.SNP.4:11598263 chr04:011598263 0 W/11598263-11598263 FN-76 Single Base Substitution G-A INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2203-S.SNP.4:11606408 chr04:011606408 0 W/11606408-11606408 FN2203-S SNP G -> A AC=2;AN=190;BQB=0.302263;DP=4724;DP4=1954,2423,29,25;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.295936;MQB=0.787423;MQSB=0;RPB=0.905956;SGB=123.261;VDB=0.372004;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T32|222|LOC_Os04g20710|protein_coding|CODING|LOC_Os04g20710.1|1|1) FN2677-S.SNP.4:11606622 chr04:011606622 0 W/11606622-11606622 FN2677-S SNP T -> G AC=1;AN=200;BQB=0.619023;DP=5216;DP4=2885,2131,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.96293e-12;MQSB=0.0123023;RPB=0.945889;SGB=86.5007;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.4:11609536 chr04:011609536 0 W/11609536-11609536 FN886-S Single Base Substitution G-A INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN4134-S.SNP.4:11614713 chr04:011614713 0 W/11614713-11614713 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.618319;DP=2746;DP4=1317,1380,11,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.36946e-08;MQSB=0.932945;RPB=0.99862;SGB=80.1982;VDB=0.294988;EFF=INTRON(MODIFIER||||1045|LOC_Os04g20720|protein_coding|CODING|LOC_Os04g20720.1|1|1) FN660-S.SNP.4:11614806 chr04:011614806 0 W/11614806-11614806 FN660-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g20720 retrotransposon, putative, centromere-specific, expressed SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN-365.SNP.4:11615250 chr04:011615250 0 W/11615250-11615250 FN-365 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g20720 retrotransposon, putative, centromere-specific, expressed SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN1025-S.SNP.4:11617406 chr04:011617406 0 W/11617406-11617406 FN1025-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g20720 retrotransposon, putative, centromere-specific, expressed SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1536-S.SNP.4:11625780 chr04:011625780 0 W/11625780-11625780 FN1536-S Single Base Substitution G-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3639-S.SNP.4:11632753 chr04:011632753 0 W/11632753-11632753 FN3639-S SNP G -> C AC=1;AN=190;BQB=0.999855;DP=2587;DP4=800,1692,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0173947;MQB=0.000493569;MQSB=0.00624607;RPB=0.434476;SGB=60.9777;VDB=0.759018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.4:11635791 chr04:011635791 0 W/11635791-11635791 FN1754-S SNP T -> C AC=2;AN=188;BQB=0.553844;DP=4332;DP4=2071,2197,24,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.44326e-27;MQSB=0.988751;RPB=0.73944;SGB=117.635;VDB=0.945805;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.4:11642761 chr04:011642761 0 W/11642761-11642761 FN4178-S SNP G -> A AC=1;AN=170;BQB=0.826419;DP=2473;DP4=1138,1263,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.10141e-10;MQSB=0.525925;RPB=0.188059;SGB=52.0913;VDB=0.888523;EFF=UTR_3_PRIME(MODIFIER||3768||132|LOC_Os04g20749|protein_coding|CODING|LOC_Os04g20749.1|4|1),UTR_3_PRIME(MODIFIER||3768||132|LOC_Os04g20749|protein_coding|CODING|LOC_Os04g20749.2|3|1) FN-370.SNP.4:11642868 chr04:011642868 0 W/11642868-11642868 FN-370 Single Base Substitution C-G UTR_3_PRIME HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3708-S.SNP.4:11642938 chr04:011642938 0 W/11642938-11642938 FN3708-S SNP C -> T AC=1;AN=190;BQB=0.993434;DP=3455;DP4=1559,1782,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.28267e-11;MQSB=0.685516;RPB=0.766836;SGB=80.9724;VDB=0.833006;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.4:11644522 chr04:011644522 0 W/11644522-11644522 FN973-S Single Base Substitution T-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN347-S.SNP.4:11644832 chr04:011644832 0 W/11644832-11644832 FN347-S Single Base Substitution G-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. W502-3-4.SNP.4:11644914 chr04:011644914 0 W/11644914-11644914 W502-3-4 Single Base Substitution T-C INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1320-S.SNP.4:11647579 chr04:011647579 0 W/11647579-11647579 FN1320-S Single Base Substitution G-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN_770-6-1.SNP.4:11647706 chr04:011647706 0 W/11647706-11647706 FN_770-6-1 Single Base Substitution T-C HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN864-S.SNP.4:11647730 chr04:011647730 0 W/11647730-11647730 FN864-S Single Base Substitution A-T INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN679-S.SNP.4:11655052 chr04:011655052 0 W/11655052-11655052 FN679-S Single Base Substitution C-G INTRON HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3511-S.SNP.4:11667257 chr04:011667257 0 W/11667257-11667257 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.99957;DP=2811;DP4=1639,1098,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16917e-07;MQSB=0.796066;RPB=0.343262;SGB=32.441;VDB=0.567407;EFF=SPLICE_SITE_REGION(LOW||||1572|LOC_Os04g20790|protein_coding|CODING|LOC_Os04g20790.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V720|1572|LOC_Os04g20790|protein_coding|CODING|LOC_Os04g20790.1|7|1) FN-268.SNP.4:11669435 chr04:011669435 0 W/11669435-11669435 FN-268 Single Base Substitution T-C INTRON HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN904-S.SNP.4:11676525 chr04:011676525 0 W/11676525-11676525 FN904-S Single Base Substitution G-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN-206.SNP.4:11676954 chr04:011676954 0 W/11676954-11676954 FN-206 Single Base Substitution G-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-206.SNP.4:11676955 chr04:011676955 0 W/11676955-11676955 FN-206 Single Base Substitution C-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-206.SNP.4:11676957 chr04:011676957 0 W/11676957-11676957 FN-206 Single Base Substitution T-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-115.SNP.4:11684108 chr04:011684108 0 W/11684108-11684108 FN-115 Single Base Substitution A-T INTRON HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2197-S.SNP.4:11688158 chr04:011688158 0 W/11688158-11688158 FN2197-S SNP G -> A AC=2;AN=190;BQB=0.521316;DP=5118;DP4=2727,2038,20,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000195389;MQB=6.89569e-12;MQSB=0.458553;RPB=0.696565;SGB=74.7373;VDB=0.447433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.4:11700727 chr04:011700727 0 W/11700727-11700727 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.00345833;DP=3326;DP4=2226,1064,17,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0120265;MQB=0.000243572;MQSB=4.75439e-05;RPB=0.968971;SGB=-130.056;VDB=0.995908;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.4:11703643 chr04:011703643 0 W/11703643-11703643 FN3939-S SNP C -> G AC=1;AN=158;BQB=0.990158;DP=2502;DP4=1293,1143,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0135891;MQB=4.61442e-05;MQSB=0.988466;RPB=0.849442;SGB=44.1818;VDB=0.157295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Cta|V723L|1538|LOC_Os04g20850|protein_coding|CODING|LOC_Os04g20850.1|6|1) FN_776-5-1.SNP.4:11705119 chr04:011705119 0 W/11705119-11705119 FN_776-5-1 Single Base Substitution T-A HET LOC_Os04g20850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN1349-S.SNP.4:11711927 chr04:011711927 0 W/11711927-11711927 FN1349-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g20860 retrotransposon protein, putative, unclassified SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-269.SNP.4:11713340 chr04:011713340 0 W/11713340-11713340 FN-269 Single Base Substitution A-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1383-S.SNP.4:11718239 chr04:011718239 0 W/11718239-11718239 FN1383-S Single Base Substitution C-G INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN_831-4-1.SNP.4:11727264 chr04:011727264 0 W/11727264-11727264 FN_831-4-1 Single Base Substitution C-G Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2328.SNP.4:11729452 chr04:011729452 0 W/11729452-11729452 FN2328 SNP C -> A AC=1;AN=192;BQB=0.637339;DP=2854;DP4=1233,1298,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0648213;MQB=0.998095;MQSB=9.6024e-14;RPB=0.998145;SGB=44.6462;VDB=0.731141;EFF=INTRON(MODIFIER||||513|LOC_Os04g20900|protein_coding|CODING|LOC_Os04g20900.1|1|1) FN2599-S.SNP.4:11751300 chr04:011751300 0 W/11751300-11751300 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.823176;DP=3726;DP4=1874,1652,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0101986;MQB=0.049734;MQSB=2.05387e-07;RPB=0.980276;SGB=36.5539;VDB=0.15791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G273R|1926|LOC_Os04g20940|protein_coding|CODING|LOC_Os04g20940.1|2|1) FN549-S.SNP.4:11754923 chr04:011754923 0 W/11754923-11754923 FN549-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2312.SNP.4:11758014 chr04:011758014 0 W/11758014-11758014 FN2312 SNP C -> G AC=2;AN=192;BQB=0.981035;DP=4817;DP4=2107,2247,17,19;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=3.73621e-10;MQSB=0.00011094;RPB=0.904297;SGB=158.755;VDB=0.790473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E605D|898|LOC_Os04g20950|protein_coding|CODING|LOC_Os04g20950.1|3|1) FN530-S.SNP.4:11759723 chr04:011759723 0 W/11759723-11759723 FN530-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g20950 retrotransposon protein, putative, unclassified, expressed SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3932-S.SNP.4:11767218 chr04:011767218 0 W/11767218-11767218 FN3932-S SNP G -> T AC=1;AN=158;BQB=0.989363;DP=2282;DP4=1057,1152,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.29213e-08;MQSB=0.999822;RPB=0.893578;SGB=30.704;VDB=0.332435;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|2|1) FN621-S.SNP.4:11768602 chr04:011768602 0 W/11768602-11768602 FN621-S Single Base Substitution G-A INTRON HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN621-S.SNP.4:11768603 chr04:011768603 0 W/11768603-11768603 FN621-S Single Base Substitution T-A INTRON HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN1724-S.SNP.4:11771589 chr04:011771589 0 W/11771589-11771589 FN1724-S SNP A -> T AC=2;AN=188;BQB=0.600284;DP=3616;DP4=1685,1848,33,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.68372e-28;MQSB=0.95041;RPB=0.901113;SGB=118.345;VDB=0.66018;EFF=UTR_5_PRIME(MODIFIER||12718||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|5|1) FN687-S.SNP.4:11784542 chr04:011784542 0 W/11784542-11784542 FN687-S Single Base Substitution G-A INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN367-S.SNP.4:11785577 chr04:011785577 0 W/11785577-11785577 FN367-S Single Base Substitution G-A INTRON HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2492.SNP.4:11786251 chr04:011786251 0 W/11786251-11786251 FN2492 SNP C -> T AC=1;AN=200;BQB=0.00719914;DP=4522;DP4=2131,2035,8,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000663423;MQB=0.000272945;MQSB=0.140192;RPB=0.693873;SGB=21.6694;VDB=0.62814;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|13|1) FN-249.SNP.4:11786631 chr04:011786631 0 W/11786631-11786631 FN-249 Single Base Substitution G-T INTRON HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN2122-S.SNP.4:11787023 chr04:011787023 0 W/11787023-11787023 FN2122-S SNP G -> T AC=2;AN=168;BQB=0.947305;DP=1904;DP4=788,1051,10,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.49285e-15;MQSB=0.0992368;RPB=0.552432;SGB=-9.7719;VDB=0.19754;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|13|1) FN2237-S.SNP.4:11787023 chr04:011787023 0 W/11787023-11787023 FN2237-S SNP G -> T AC=1;AN=190;BQB=0.748489;DP=4079;DP4=1912,1895,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61678e-09;MQSB=0.975532;RPB=0.89758;SGB=68.0854;VDB=0.611746;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|13|1) FN727-S.SNP.4:11787023 chr04:011787023 0 W/11787023-11787023 FN727-S Single Base Substitution G-T INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN-332.SNP.4:11790761 chr04:011790761 0 W/11790761-11790761 FN-332 Single Base Substitution G-T INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-182.SNP.4:11790849 chr04:011790849 0 W/11790849-11790849 FN-182 Single Base Substitution T-C INTRON HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN4152-S.SNP.4:11791771 chr04:011791771 0 W/11791771-11791771 FN4152-S SNP A -> C AC=2;AN=170;BQB=0.713517;DP=2512;DP4=1266,1121,21,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.94797e-22;MQSB=0.952478;RPB=0.109356;SGB=131.272;VDB=0.214363;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|13|1) FN762-S.SNP.4:11794216 chr04:011794216 0 W/11794216-11794216 FN762-S Single Base Substitution C-T INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2453.SNP.4:11796855 chr04:011796855 0 W/11796855-11796855 FN2453 SNP C -> T AC=1;AN=200;BQB=0.362516;DP=5115;DP4=2321,2430,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47754e-12;MQSB=0.810134;RPB=0.422488;SGB=55.5366;VDB=0.804741;EFF=INTRON(MODIFIER||||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|15|1) FN2172-S.SNP.4:11797752 chr04:011797752 0 W/11797752-11797752 FN2172-S SNP C -> T AC=1;AN=168;BQB=0.0377454;DP=3755;DP4=2058,1647,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.47544e-09;MQSB=0.996394;RPB=0.808652;SGB=-77.4832;VDB=0.391054;EFF=UTR_3_PRIME(MODIFIER||231||161|LOC_Os04g20960|protein_coding|CODING|LOC_Os04g20960.1|17|1) FN4202-S.SNP.4:11798026 chr04:011798026 0 W/11798026-11798026 FN4202-S SNP T -> A AC=2;AN=170;BQB=0.994545;DP=2802;DP4=1424,1156,30,28;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.71081e-31;MQSB=0.977469;RPB=0.999581;SGB=246.803;VDB=0.0164888;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.4:11806445 chr04:011806445 0 W/11806445-11806445 FN3380-S SNP G -> A AC=2;AN=184;BQB=0.599927;DP=3120;DP4=1728,1290,16,15;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.53365e-09;MQSB=0.938907;RPB=0.970249;SGB=99.14;VDB=0.020423;EFF=INTRON(MODIFIER||||437|LOC_Os04g20990|protein_coding|CODING|LOC_Os04g20990.1|6|1) FN2084-S.SNP.4:11813290 chr04:011813290 0 W/11813290-11813290 FN2084-S SNP C -> T AC=1;AN=168;BQB=0.00885366;DP=4109;DP4=1858,2199,14,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.20943e-13;MQSB=0.895728;RPB=0.36031;SGB=-113.477;VDB=0.212821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G161D|437|LOC_Os04g20990|protein_coding|CODING|LOC_Os04g20990.1|4|1) FN-180.SNP.4:11821108 chr04:011821108 0 W/11821108-11821108 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN1136-19-S.SNP.4:11828566 chr04:011828566 0 W/11828566-11828566 FN1136-19-S Single Base Substitution G-T INTRON Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN786-S.SNP.4:11830795 chr04:011830795 0 W/11830795-11830795 FN786-S Single Base Substitution C-T INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3550-S.SNP.4:11834641 chr04:011834641 0 W/11834641-11834641 FN3550-S SNP C -> G AC=2;AN=188;BQB=0.696722;DP=2449;DP4=981,1387,10,12;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00163332;MQB=2.09281e-08;MQSB=1.67984e-14;RPB=0.828707;SGB=94.4119;VDB=0.121738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.4:11835904 chr04:011835904 0 W/11835904-11835904 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3869-S.SNP.4:11843023 chr04:011843023 0 W/11843023-11843023 FN3869-S SNP T -> G AC=1;AN=158;BQB=0.953708;DP=2531;DP4=1269,1158,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=33;MQ0F=0.0450415;MQB=0.833591;MQSB=0;RPB=0.839313;SGB=51.4366;VDB=0.614629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.4:11848579 chr04:011848579 0 W/11848579-11848579 FN3510-S SNP G -> T AC=1;AN=188;BQB=0.497857;DP=4239;DP4=2200,1866,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0979005;MQB=0.459233;MQSB=0;RPB=0.663784;SGB=-9.02352;VDB=0.944357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.4:11849950 chr04:011849950 0 W/11849950-11849950 FN3677-S SNP T -> C AC=1;AN=190;BQB=0.976496;DP=2842;DP4=1719,998,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0675581;MQB=0.751637;MQSB=0.691021;RPB=1;SGB=49.0954;VDB=0.122175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.4:11850838 chr04:011850838 0 W/11850838-11850838 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.992984;DP=7033;DP4=3347,3273,9,9;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.109057;MQB=0.167046;MQSB=0;RPB=0.561154;SGB=54.6902;VDB=0.859335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.4:11853346 chr04:011853346 0 W/11853346-11853346 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.54149;DP=4511;DP4=2143,2131,14,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0022168;MQB=0.0774272;MQSB=0.067938;RPB=0.900288;SGB=104.921;VDB=0.254487;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q254*|506|LOC_Os04g21090|protein_coding|CODING|LOC_Os04g21090.1|2|1) FN1754-S.SNP.4:11860846 chr04:011860846 0 W/11860846-11860846 FN1754-S SNP A -> C AC=2;AN=188;BQB=0.744904;DP=2058;DP4=1146,874,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.35894e-10;MQSB=0.869754;RPB=0.792682;SGB=-11.74;VDB=0.981643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cCt|H455P|742|LOC_Os04g21100|protein_coding|CODING|LOC_Os04g21100.1|2|1) FN-384.SNP.4:11873591 chr04:011873591 0 W/11873591-11873591 FN-384 Single Base Substitution A-C INTRON HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN2627-S.SNP.4:11882985 chr04:011882985 0 W/11882985-11882985 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.177384;DP=4214;DP4=2025,1932,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.26883e-16;MQSB=0.934425;RPB=0.990034;SGB=109.527;VDB=0.736612;EFF=INTRON(MODIFIER||||886|LOC_Os04g21110|protein_coding|CODING|LOC_Os04g21110.1|20|1) FN4036-S.SNP.4:11885713 chr04:011885713 0 W/11885713-11885713 FN4036-S SNP G -> A AC=1;AN=168;BQB=0.977081;DP=2746;DP4=1367,1268,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.49002e-07;MQSB=0.972516;RPB=0.832913;SGB=43.3113;VDB=0.610077;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T782|886|LOC_Os04g21110|protein_coding|CODING|LOC_Os04g21110.1|22|1) FN2450.SNP.4:11890299 chr04:011890299 0 W/11890299-11890299 FN2450 SNP T -> C AC=1;AN=200;BQB=0.323515;DP=4515;DP4=2134,2062,9,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00598007;MQB=7.93609e-06;MQSB=2.14962e-15;RPB=0.630633;SGB=81.8956;VDB=0.0978723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.4:11896368 chr04:011896368 0 W/11896368-11896368 FN3058-S SNP C -> G AC=1;AN=184;BQB=0.93183;DP=2585;DP4=1402,1080,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68487e-07;MQSB=0.969052;RPB=0.377011;SGB=35.7479;VDB=0.33395;EFF=INTRON(MODIFIER||||323|LOC_Os04g21130|protein_coding|CODING|LOC_Os04g21130.1|1|1) FN-249.SNP.4:11897427 chr04:011897427 0 W/11897427-11897427 FN-249 Single Base Substitution C-T INTRON HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN3373-S.SNP.4:11901980 chr04:011901980 0 W/11901980-11901980 FN3373-S SNP G -> A AC=1;AN=184;BQB=0.966943;DP=6312;DP4=2297,3867,8,15;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.124842;MQB=0.089785;MQSB=0;RPB=0.988727;SGB=70.9657;VDB=0.286234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R649H|1802|LOC_Os04g21140|protein_coding|CODING|LOC_Os04g21140.1|1|1) FN2232-S.SNP.4:11903889 chr04:011903889 0 W/11903889-11903889 FN2232-S SNP G -> A AC=1;AN=190;BQB=0.770278;DP=6416;DP4=2872,3186,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.126091;MQB=0.760373;MQSB=5.45552e-06;RPB=0.999778;SGB=53.8699;VDB=0.214995;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1266|1802|LOC_Os04g21140|protein_coding|CODING|LOC_Os04g21140.1|2|1) FN498-S.SNP.4:11909609 chr04:011909609 0 W/11909609-11909609 FN498-S Single Base Substitution T-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN3400-S.SNP.4:11919255 chr04:011919255 0 W/11919255-11919255 FN3400-S SNP A -> G AC=1;AN=184;BQB=0.895701;DP=2689;DP4=1449,1163,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.363e-05;MQSB=0.970395;RPB=0.969067;SGB=39.699;VDB=0.906563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.4:11921142 chr04:011921142 0 W/11921142-11921142 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.810134;DP=2937;DP4=1627,1207,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.02123e-05;MQSB=0.533285;RPB=0.930573;SGB=28.9929;VDB=0.84546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.4:11921664 chr04:011921664 0 W/11921664-11921664 FN3424-S SNP C -> T AC=1;AN=184;BQB=0.962542;DP=3354;DP4=1492,1775,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000298151;MQB=0.00373139;MQSB=0.000738614;RPB=0.594253;SGB=35.1773;VDB=0.0496803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A887T|888|LOC_Os04g21180|protein_coding|CODING|LOC_Os04g21180.1|8|1) FN3480-S.SNP.4:11924818 chr04:011924818 0 W/11924818-11924818 FN3480-S SNP C -> T AC=2;AN=184;BQB=0.544737;DP=3228;DP4=1748,1369,21,11;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0.0594796;MQB=0.812239;MQSB=5.22117e-07;RPB=0.897148;SGB=139.178;VDB=0.158674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G202R|888|LOC_Os04g21180|protein_coding|CODING|LOC_Os04g21180.1|2|1) FN-95.SNP.4:11929723 chr04:011929723 0 W/11929723-11929723 FN-95 Single Base Substitution T-A INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3549-S.SNP.4:11930788 chr04:011930788 0 W/11930788-11930788 FN3549-S SNP G -> A AC=1;AN=188;BQB=0.262036;DP=2940;DP4=1603,1244,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00231515;MQSB=0.963291;RPB=0.862708;SGB=28.8977;VDB=0.735094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.4:11932894 chr04:011932894 0 W/11932894-11932894 FN2771-S SNP A -> C AC=2;AN=198;BQB=0.885432;DP=4441;DP4=2221,1955,18,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.4467e-25;MQSB=0.989729;RPB=0.567432;SGB=137.217;VDB=0.862594;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.4:11947817 chr04:011947817 0 W/11947817-11947817 FN4231-S SNP C -> G AC=1;AN=170;BQB=0.997574;DP=3486;DP4=1895,1510,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0550775;MQB=0.032891;MQSB=0.00295952;RPB=0.554873;SGB=34.878;VDB=0.204649;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgG|R571|1803|LOC_Os04g21200|protein_coding|CODING|LOC_Os04g21200.1|3|1) FN1313-S.SNP.4:11948391 chr04:011948391 0 W/11948391-11948391 FN1313-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g21200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3909-S.SNP.4:11948630 chr04:011948630 0 W/11948630-11948630 FN3909-S SNP G -> T AC=1;AN=158;BQB=0.984015;DP=3393;DP4=1366,1895,15,34;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0742706;MQB=9.67912e-09;MQSB=6.73472e-27;RPB=2.75251e-05;SGB=-911.888;VDB=0.0821234;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P842|1803|LOC_Os04g21200|protein_coding|CODING|LOC_Os04g21200.1|3|1) FN1738-S.SNP.4:11951335 chr04:011951335 0 W/11951335-11951335 FN1738-S SNP C -> G AC=1;AN=188;BQB=0.376075;DP=2660;DP4=1600,1031,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=25;MQ0F=0.17406;MQB=0.66952;MQSB=4.90454e-34;RPB=0.736802;SGB=18.4463;VDB=0.737558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P1744R|1803|LOC_Os04g21200|protein_coding|CODING|LOC_Os04g21200.1|3|1) FN2215-S.SNP.4:11955408 chr04:011955408 0 W/11955408-11955408 FN2215-S SNP G -> A AC=1;AN=190;BQB=0.929281;DP=4418;DP4=1828,2348,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.045722;MQB=0.862994;MQSB=5.35455e-07;RPB=0.988996;SGB=60.9777;VDB=0.0240088;EFF=INTRON(MODIFIER||||1804|LOC_Os04g21210|protein_coding|CODING|LOC_Os04g21210.1|2|1) FN2753-S.SNP.4:11957221 chr04:011957221 0 W/11957221-11957221 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.62221;DP=6875;DP4=3786,2811,8,17;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0427636;MQB=0.0235061;MQSB=7.14662e-44;RPB=0.743653;SGB=-38.4742;VDB=0.959894;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P833|1804|LOC_Os04g21210|protein_coding|CODING|LOC_Os04g21210.1|3|1) CW-631-3-1.SNP.4:11957279 chr04:011957279 0 W/11957279-11957279 CW-631-3-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g21210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1006-S.SNP.4:11958839 chr04:011958839 0 W/11958839-11958839 FN1006-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. W138-2-1.SNP.4:11959781 chr04:011959781 0 W/11959781-11959781 W138-2-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g21210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3756-S.SNP.4:11966199 chr04:011966199 0 W/11966199-11966199 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.95882;DP=3134;DP4=1197,1842,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0350989;MQB=0.0249867;MQSB=0.797448;RPB=0.993434;SGB=25.439;VDB=0.57381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V27I|954|LOC_Os04g21220|protein_coding|CODING|LOC_Os04g21220.1|2|1) FN2670-S.SNP.4:11966509 chr04:011966509 0 W/11966509-11966509 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.762762;DP=4240;DP4=1549,2507,2,14;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.337028;MQB=0.0318651;MQSB=0;RPB=0.916042;SGB=26.8797;VDB=0.240592;EFF=INTRON(MODIFIER||||954|LOC_Os04g21220|protein_coding|CODING|LOC_Os04g21220.1|1|1) FN1493-S.SNP.4:11973118 chr04:011973118 0 W/11973118-11973118 FN1493-S Single Base Substitution G-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN-249.SNP.4:11979210 chr04:011979210 0 W/11979210-11979210 FN-249 Single Base Substitution G-A INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN3607-S.SNP.4:11987306 chr04:011987306 0 W/11987306-11987306 FN3607-S SNP C -> G AC=2;AN=190;BQB=0.824971;DP=2700;DP4=1350,1233,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.49384e-09;MQSB=0.913395;RPB=0.931892;SGB=57.4238;VDB=0.17557;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.4:11994630 chr04:011994630 0 W/11994630-11994630 FN3520-S SNP G -> A AC=2;AN=188;BQB=0.763778;DP=3451;DP4=1655,1681,22,26;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.00144886;MQB=0.441469;MQSB=0;RPB=0.654244;SGB=212.538;VDB=0.948212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R1805C|2027|LOC_Os04g21270|protein_coding|CODING|LOC_Os04g21270.1|2|1) FN2085-S.SNP.4:12004120 chr04:012004120 0 W/12004120-12004120 FN2085-S SNP A -> T AC=1;AN=168;BQB=0.725435;DP=2854;DP4=1159,1621,6,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00297e-12;MQSB=0.995569;RPB=0.780651;SGB=17.068;VDB=0.767846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.4:12007415 chr04:012007415 0 W/12007415-12007415 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.820411;DP=4792;DP4=2122,2391,9,10;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.280259;MQB=0.062319;MQSB=0;RPB=0.999918;SGB=58.2954;VDB=0.0258348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.4:12010944 chr04:012010944 0 W/12010944-12010944 FN2081-S SNP A -> T AC=2;AN=168;BQB=0.898961;DP=2885;DP4=1551,1267,18,20;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00138648;MQB=1.12439e-14;MQSB=0.561421;RPB=0.699309;SGB=-6.75618;VDB=0.871812;EFF=INTRON(MODIFIER||||457|LOC_Os04g21290|protein_coding|CODING|LOC_Os04g21290.1|2|1) FN551-S.SNP.4:12027749 chr04:012027749 0 W/12027749-12027749 FN551-S Single Base Substitution T-G INTRON HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN1097-S.SNP.4:12030447 chr04:012030447 0 W/12030447-12030447 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2582-S.SNP.4:12031967 chr04:012031967 0 W/12031967-12031967 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.966397;DP=4127;DP4=2011,1906,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00103354;MQSB=0.898793;RPB=0.105007;SGB=26.5745;VDB=0.433529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.4:12035290 chr04:012035290 0 W/12035290-12035290 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.0615186;DP=4300;DP4=2104,2124,24,25;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.000697674;MQB=0.178969;MQSB=0.684944;RPB=0.841203;SGB=-322.566;VDB=0.268737;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.4:12037324 chr04:012037324 0 W/12037324-12037324 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.996462;DP=2690;DP4=1420,1188,17,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86284e-15;MQSB=0.555786;RPB=0.801728;SGB=76.1898;VDB=0.814813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.4:12039639 chr04:012039639 0 W/12039639-12039639 FN1614-S Single Base Substitution G-T INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2657-S.SNP.4:12044000 chr04:012044000 0 W/12044000-12044000 FN2657-S SNP A -> G AC=1;AN=200;BQB=0.772522;DP=4948;DP4=2564,2158,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79797e-16;MQSB=0.9996;RPB=0.685331;SGB=114.132;VDB=0.947096;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.4:12045724 chr04:012045724 0 W/12045724-12045724 FN3676-S SNP C -> T AC=2;AN=190;BQB=0.955628;DP=3044;DP4=1300,1593,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.96213e-15;MQSB=0.750018;RPB=0.873613;SGB=59.414;VDB=0.766056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.4:12046728 chr04:012046728 0 W/12046728-12046728 FN1429-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3693-S.SNP.4:12049118 chr04:012049118 0 W/12049118-12049118 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.978227;DP=3592;DP4=1820,1624,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58257e-08;MQSB=0.963045;RPB=0.914539;SGB=49.0954;VDB=0.395593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.4:12049119 chr04:012049119 0 W/12049119-12049119 FN3693-S SNP G -> A AC=1;AN=190;BQB=0.959643;DP=3576;DP4=1792,1647,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.1145e-09;MQSB=0.851432;RPB=0.84971;SGB=18.552;VDB=0.396446;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.4:12061908 chr04:012061908 0 W/12061908-12061908 FN_827-1 Single Base Substitution G-A HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN419-S.SNP.4:12065434 chr04:012065434 0 W/12065434-12065434 FN419-S Single Base Substitution A-G INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2688-S.SNP.4:12066534 chr04:012066534 0 W/12066534-12066534 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.999393;DP=4789;DP4=2516,2025,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.24225e-08;MQSB=0.843785;RPB=0.993345;SGB=33.0593;VDB=0.961343;EFF=INTRON(MODIFIER||||184|LOC_Os04g21360|protein_coding|CODING|LOC_Os04g21360.1|1|1) FN2751-S.SNP.4:12067297 chr04:012067297 0 W/12067297-12067297 FN2751-S SNP A -> T AC=1;AN=200;BQB=0.998834;DP=5302;DP4=2607,2419,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25185e-07;MQSB=0.73093;RPB=0.332962;SGB=36.6644;VDB=0.515483;EFF=INTRON(MODIFIER||||184|LOC_Os04g21360|protein_coding|CODING|LOC_Os04g21360.1|3|1) FN2556-S.SNP.4:12072895 chr04:012072895 0 W/12072895-12072895 FN2556-S SNP G -> T AC=1;AN=198;BQB=0.982779;DP=4286;DP4=2036,2055,16,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.98931e-21;MQSB=0.872322;RPB=0.803338;SGB=76.0565;VDB=0.380964;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.4:12074398 chr04:012074398 0 W/12074398-12074398 FN276-S Single Base Substitution A-T INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN4020-S.SNP.4:12080867 chr04:012080867 0 W/12080867-12080867 FN4020-S SNP A -> T AC=2;AN=168;BQB=0.833644;DP=2567;DP4=1182,1299,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.00295e-12;MQSB=0.90395;RPB=0.954303;SGB=75.9177;VDB=0.785993;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.4:12082710 chr04:012082710 0 W/12082710-12082710 FN739-S Single Base Substitution G-C INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1730-S.SNP.4:12082967 chr04:012082967 0 W/12082967-12082967 FN1730-S SNP T -> G AC=1;AN=188;BQB=0.147744;DP=2290;DP4=1428,831,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00481448;MQSB=0.951569;RPB=0.953386;SGB=-0.634963;VDB=0.337344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.4:12083701 chr04:012083701 0 W/12083701-12083701 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.897785;DP=4748;DP4=2480,2001,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.34373e-11;MQSB=0.994624;RPB=0.46599;SGB=14.3054;VDB=0.555912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3942-S.SNP.4:12088218 chr04:012088218 0 W/12088218-12088218 FN3942-S SNP T -> A AC=2;AN=168;BQB=0.950119;DP=2770;DP4=1229,1379,24,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.30869e-20;MQSB=0.991365;RPB=0.337622;SGB=130.811;VDB=0.961315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.4:12108066 chr04:012108066 0 W/12108066-12108066 FN1575-S Single Base Substitution G-C INTERGENIC Homo SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN836-S.SNP.4:12117622 chr04:012117622 0 W/12117622-12117622 FN836-S Single Base Substitution G-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3886-S.SNP.4:12120568 chr04:012120568 0 W/12120568-12120568 FN3886-S SNP G -> A AC=1;AN=158;BQB=0.879001;DP=2517;DP4=1163,1254,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.24006e-09;MQSB=0.878318;RPB=0.987611;SGB=55.806;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.4:12122074 chr04:012122074 0 W/12122074-12122074 FN-120 Single Base Substitution C-T INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN456-S.SNP.4:12122074 chr04:012122074 0 W/12122074-12122074 FN456-S Single Base Substitution C-T INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN837-S.SNP.4:12122074 chr04:012122074 0 W/12122074-12122074 FN837-S Single Base Substitution C-T INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN-159.SNP.4:12131632 chr04:012131632 0 W/12131632-12131632 FN-159 Single Base Substitution A-T INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3592-S.SNP.4:12137933 chr04:012137933 0 W/12137933-12137933 FN3592-S SNP G -> A AC=2;AN=188;BQB=0.681617;DP=2656;DP4=1174,1421,7,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.22091e-13;MQSB=0.997207;RPB=0.338408;SGB=98.9552;VDB=0.654682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.4:12138846 chr04:012138846 0 W/12138846-12138846 FN2451 SNP C -> A AC=1;AN=200;BQB=0.826985;DP=4262;DP4=2324,1710,25,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12241e-24;MQSB=0.972731;RPB=0.994754;SGB=97.2193;VDB=0.973443;EFF=INTERGENIC(MODIFIER||||||||||1) FN593-S.SNP.4:12149584 chr04:012149584 0 W/12149584-12149584 FN593-S Single Base Substitution C-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-278.SNP.4:12169523 chr04:012169523 0 W/12169523-12169523 FN-278 Single Base Substitution T-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2253-S.SNP.4:12173534 chr04:012173534 0 W/12173534-12173534 FN2253-S SNP A -> G AC=2;AN=190;BQB=0.957784;DP=4789;DP4=2316,2235,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.58521e-11;MQSB=0.693316;RPB=0.293806;SGB=76.4186;VDB=0.285863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.4:12180628 chr04:012180628 0 W/12180628-12180628 FN2229-S SNP T -> A AC=1;AN=190;BQB=0.735255;DP=4462;DP4=1993,1993,21,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21746e-21;MQSB=0.629624;RPB=0.0554253;SGB=55.389;VDB=0.923383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.4:12191560 chr04:012191560 0 W/12191560-12191560 FN3419-S SNP A -> C AC=1;AN=184;BQB=0.974868;DP=4817;DP4=2051,2492,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.0707909;MQB=0.175886;MQSB=5.58112e-10;RPB=0.998578;SGB=53.3568;VDB=0.0203147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.4:12193348 chr04:012193348 0 W/12193348-12193348 FN3794-S SNP A -> C AC=1;AN=190;BQB=0.94413;DP=2819;DP4=1455,1237,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.218872;MQB=0.368609;MQSB=0;RPB=0.0674755;SGB=25.439;VDB=0.350064;EFF=INTERGENIC(MODIFIER||||||||||1) W481-5-1.SNP.4:12193545 chr04:012193545 0 W/12193545-12193545 W481-5-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-265.SNP.4:12201198 chr04:012201198 0 W/12201198-12201198 FN-265 Single Base Substitution G-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN507-S.SNP.4:12212612 chr04:012212612 0 W/12212612-12212612 FN507-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g21590 PB1 domain containing protein, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN_N1-119-1.SNP.4:12218387 chr04:012218387 0 W/12218387-12218387 FN_N1-119-1 Single Base Substitution G-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN482-S.SNP.4:12228513 chr04:012228513 0 W/12228513-12228513 FN482-S Single Base Substitution A-G INTRON HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN3484-S.SNP.4:12234531 chr04:012234531 0 W/12234531-12234531 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.89376;DP=3087;DP4=1427,1586,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.71948e-12;MQSB=0.481518;RPB=0.977164;SGB=84.9167;VDB=0.469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.4:12243782 chr04:012243782 0 W/12243782-12243782 FN3794-S SNP C -> T AC=1;AN=190;BQB=0.818116;DP=2686;DP4=1321,1221,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06091e-11;MQSB=0.196482;RPB=0.821566;SGB=60.9777;VDB=0.893344;EFF=INTRON(MODIFIER||||214|LOC_Os04g21650|protein_coding|CODING|LOC_Os04g21650.1|1|1),INTRON(MODIFIER||||214|LOC_Os04g21650|protein_coding|CODING|LOC_Os04g21650.2|1|1) FN2242-S.SNP.4:12251344 chr04:012251344 0 W/12251344-12251344 FN2242-S SNP A -> T AC=1;AN=190;BQB=0.847509;DP=4760;DP4=2235,2133,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.21976e-06;MQSB=0.998854;RPB=0.38903;SGB=44.5415;VDB=0.0500111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.4:12256918 chr04:012256918 0 W/12256918-12256918 FN3887-S SNP C -> T AC=1;AN=158;BQB=0.926271;DP=2454;DP4=1169,1211,5,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.39563e-09;MQSB=0.986097;RPB=0.818386;SGB=54.2901;VDB=0.98597;EFF=INTRON(MODIFIER||||357|LOC_Os04g21660|protein_coding|CODING|LOC_Os04g21660.1|3|1) FN451-S.SNP.4:12273974 chr04:012273974 0 W/12273974-12273974 FN451-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-262.SNP.4:12274023 chr04:012274023 0 W/12274023-12274023 FN-262 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g21700 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-394.SNP.4:12277012 chr04:012277012 0 W/12277012-12277012 FN-394 Single Base Substitution G-T INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3721-S.SNP.4:12277802 chr04:012277802 0 W/12277802-12277802 FN3721-S SNP C -> G AC=2;AN=190;BQB=0.914409;DP=3305;DP4=1738,1437,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.46298e-15;MQSB=0.626368;RPB=0.820462;SGB=56.8601;VDB=0.546664;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.4:12283921 chr04:012283921 0 W/12283921-12283921 FN4231-S SNP A -> G AC=1;AN=170;BQB=0.992875;DP=2561;DP4=1262,1230,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.91514e-07;MQSB=0.999857;RPB=0.998962;SGB=43.4296;VDB=0.429561;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.4:12287547 chr04:012287547 0 W/12287547-12287547 FN3455-S SNP C -> A AC=1;AN=184;BQB=0.710097;DP=2553;DP4=1025,1469,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.47705e-06;MQSB=0.80787;RPB=0.996767;SGB=35.7479;VDB=0.903497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.4:12289167 chr04:012289167 0 W/12289167-12289167 FN3855-S SNP T -> A AC=2;AN=158;BQB=0.987045;DP=2215;DP4=1060,1094,6,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.04654e-12;MQSB=0.993822;RPB=0.85801;SGB=86.3921;VDB=0.438439;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.4:12291590 chr04:012291590 0 W/12291590-12291590 FN555-S Single Base Substitution G-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3440-S.SNP.4:12301006 chr04:012301006 0 W/12301006-12301006 FN3440-S SNP T -> C AC=1;AN=184;BQB=0.894158;DP=2658;DP4=1186,1398,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10893e-09;MQSB=0.777141;RPB=0.961979;SGB=66.8296;VDB=0.317166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S188P|629|LOC_Os04g21740|protein_coding|CODING|LOC_Os04g21740.1|2|1) FN1282-S.SNP.4:12304932 chr04:012304932 0 W/12304932-12304932 FN1282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1545-S.SNP.4:12309433 chr04:012309433 0 W/12309433-12309433 FN1545-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g21750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2731-S.SNP.4:12311093 chr04:012311093 0 W/12311093-12311093 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.957326;DP=4960;DP4=2404,2303,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.19271e-10;MQSB=0.975291;RPB=0.315681;SGB=77.2904;VDB=0.364228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1109C|1355|LOC_Os04g21750|protein_coding|CODING|LOC_Os04g21750.1|10|1) FN2231-S.SNP.4:12316754 chr04:012316754 0 W/12316754-12316754 FN2231-S SNP C -> A AC=2;AN=190;BQB=0.697007;DP=4931;DP4=2211,2292,24,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.52304e-17;MQSB=0.912426;RPB=0.178452;SGB=44.5119;VDB=0.945771;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.4:12317573 chr04:012317573 0 W/12317573-12317573 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN-132.SNP.4:12319850 chr04:012319850 0 W/12319850-12319850 FN-132 Single Base Substitution A-G INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN-52.SNP.4:12321483 chr04:012321483 0 W/12321483-12321483 FN-52 Single Base Substitution G-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN-52.SNP.4:12321485 chr04:012321485 0 W/12321485-12321485 FN-52 Single Base Substitution C-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2201-S.SNP.4:12325934 chr04:012325934 0 W/12325934-12325934 FN2201-S SNP A -> T AC=2;AN=190;BQB=0.947071;DP=5100;DP4=2327,2444,16,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.28959e-20;MQSB=0.942487;RPB=0.354912;SGB=87.5066;VDB=0.611405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.4:12331569 chr04:012331569 0 W/12331569-12331569 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2687-S.SNP.4:12343611 chr04:012343611 0 W/12343611-12343611 FN2687-S SNP A -> C AC=1;AN=200;BQB=0.766939;DP=4337;DP4=2028,2115,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48918e-11;MQSB=0.879082;RPB=0.722999;SGB=72.7161;VDB=0.731098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E94D|885|LOC_Os04g21790|protein_coding|CODING|LOC_Os04g21790.1|1|1) FN-311.SNP.4:12349251 chr04:012349251 0 W/12349251-12349251 FN-311 Single Base Substitution T-C INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN-311.SNP.4:12349253 chr04:012349253 0 W/12349253-12349253 FN-311 Single Base Substitution T-C INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3824-S.SNP.4:12351987 chr04:012351987 0 W/12351987-12351987 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.980357;DP=2978;DP4=1569,1282,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52828e-09;MQSB=0.993405;RPB=0.66975;SGB=39.6545;VDB=0.593996;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E30K|221|LOC_Os04g21800|protein_coding|CODING|LOC_Os04g21800.1|2|1) FN2454.SNP.4:12352478 chr04:012352478 0 W/12352478-12352478 FN2454 SNP T -> C AC=2;AN=200;BQB=0.981215;DP=4309;DP4=1848,2047,21,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.58155e-24;MQSB=0.564025;RPB=0.953008;SGB=144.819;VDB=0.435624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.4:12352481 chr04:012352481 0 W/12352481-12352481 FN2454 SNP C -> T AC=2;AN=200;BQB=0.26294;DP=4329;DP4=1878,2146,18,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20523e-21;MQSB=0.617331;RPB=0.927456;SGB=169.394;VDB=0.228164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3888-S.SNP.4:12352659 chr04:012352659 0 W/12352659-12352659 FN3888-S SNP G -> A AC=1;AN=158;BQB=0.750068;DP=2422;DP4=1172,1113,13,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.41271e-10;MQSB=0.974995;RPB=0.907659;SGB=33.2965;VDB=0.675734;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.4:12356547 chr04:012356547 0 W/12356547-12356547 FN968-S Single Base Substitution G-A INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN2386.SNP.4:12359133 chr04:012359133 0 W/12359133-12359133 FN2386 SNP C -> T AC=1;AN=192;BQB=0.0630914;DP=2125;DP4=1409,302,10,2;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00188235;MQB=0.003113;MQSB=2.24153e-33;RPB=0.895117;SGB=-0.466926;VDB=0.811629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A8V|200|LOC_Os04g21810|protein_coding|CODING|LOC_Os04g21810.1|1|1) FN2689-S.SNP.4:12364988 chr04:012364988 0 W/12364988-12364988 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.885635;DP=5018;DP4=2562,2201,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58478e-13;MQSB=0.982371;RPB=0.389306;SGB=55.5366;VDB=0.0062415;EFF=UTR_5_PRIME(MODIFIER||1718||489|LOC_Os04g21820|protein_coding|CODING|LOC_Os04g21820.1|1|1) FN_N1-26-1.SNP.4:12367153 chr04:012367153 0 W/12367153-12367153 FN_N1-26-1 Single Base Substitution T-G Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN2557-S.SNP.4:12368913 chr04:012368913 0 W/12368913-12368913 FN2557-S SNP A -> G AC=2;AN=198;BQB=0.943228;DP=4255;DP4=2020,2008,14,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.70141e-11;MQSB=0.785132;RPB=0.46448;SGB=42.3199;VDB=0.471712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E307G|489|LOC_Os04g21820|protein_coding|CODING|LOC_Os04g21820.1|4|1) FN4031-S.SNP.4:12372401 chr04:012372401 0 W/12372401-12372401 FN4031-S SNP A -> C AC=1;AN=168;BQB=0.76466;DP=2447;DP4=1276,993,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.48516e-09;MQSB=0.496782;RPB=0.6617;SGB=36.7696;VDB=0.991204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.4:12372415 chr04:012372415 0 W/12372415-12372415 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.932687;DP=2587;DP4=1314,1035,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80087e-09;MQSB=0.744234;RPB=0.150862;SGB=-37.6628;VDB=0.105767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.4:12375177 chr04:012375177 0 W/12375177-12375177 FN2380 SNP A -> C AC=2;AN=192;BQB=0.999912;DP=4943;DP4=2333,2337,17,9;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.46863e-15;MQSB=0.872633;RPB=0.402042;SGB=82.5522;VDB=0.0750208;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.4:12383088 chr04:012383088 0 W/12383088-12383088 FN_786-4-1 Single Base Substitution T-C HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN412-S.SNP.4:12398907 chr04:012398907 0 W/12398907-12398907 FN412-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g21890 disease resistance protein RPM1, putative, expressed SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2446.SNP.4:12400455 chr04:012400455 0 W/12400455-12400455 FN2446 SNP T -> A AC=2;AN=200;BQB=0.881855;DP=4346;DP4=2310,1649,20,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000230097;MQB=2.22392e-20;MQSB=0.99618;RPB=0.801456;SGB=92.009;VDB=0.820301;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.4:12405400 chr04:012405400 0 W/12405400-12405400 FN1067-S Single Base Substitution T-C INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1512-S.SNP.4:12407648 chr04:012407648 0 W/12407648-12407648 FN1512-S Single Base Substitution A-G INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1295-S.SNP.4:12407990 chr04:012407990 0 W/12407990-12407990 FN1295-S Single Base Substitution C-T INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1048-S.SNP.4:12415569 chr04:012415569 0 W/12415569-12415569 FN1048-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN4234-S.SNP.4:12418383 chr04:012418383 0 W/12418383-12418383 FN4234-S SNP A -> C AC=1;AN=170;BQB=0.902267;DP=2437;DP4=1233,1096,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00410341;MQB=1.17524e-05;MQSB=0.706767;RPB=0.48919;SGB=61.2001;VDB=0.393621;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atC|I618|962|LOC_Os04g21930|protein_coding|CODING|LOC_Os04g21930.1|4|1) FN2704-S.SNP.4:12421217 chr04:012421217 0 W/12421217-12421217 FN2704-S SNP C -> T AC=2;AN=200;BQB=0.212183;DP=4782;DP4=2357,2107,40,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.48125e-41;MQSB=0.949616;RPB=0.508944;SGB=275.672;VDB=0.826587;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.4:12423416 chr04:012423416 0 W/12423416-12423416 FN3756-S SNP G -> A AC=1;AN=190;BQB=0.991761;DP=2545;DP4=1423,965,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93447e-07;MQSB=0.484989;RPB=0.999637;SGB=32.5467;VDB=0.645013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.4:12428208 chr04:012428208 0 W/12428208-12428208 FN3846-S SNP T -> C AC=1;AN=190;BQB=0.999975;DP=2728;DP4=1258,1321,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96407e-08;MQSB=0.998741;RPB=0.925454;SGB=43.2083;VDB=0.175799;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.4:12428335 chr04:012428335 0 W/12428335-12428335 FN565-S Single Base Substitution A-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN565-S.SNP.4:12428336 chr04:012428336 0 W/12428336-12428336 FN565-S Single Base Substitution G-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN449-S.SNP.4:12435185 chr04:012435185 0 W/12435185-12435185 FN449-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3297-S.SNP.4:12446169 chr04:012446169 0 W/12446169-12446169 FN3297-S SNP A -> C AC=2;AN=184;BQB=0.764596;DP=2881;DP4=1404,1356,13,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.69047e-13;MQSB=0.931812;RPB=0.733921;SGB=134.656;VDB=0.659309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.4:12454414 chr04:012454414 0 W/12454414-12454414 FN2445 SNP T -> C AC=1;AN=200;BQB=0.0880932;DP=4646;DP4=2362,2052,5,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00301334;MQB=0.000961074;MQSB=6.28377e-05;RPB=0.504191;SGB=29.4541;VDB=0.58057;EFF=INTERGENIC(MODIFIER||||||||||1) FN554-S.SNP.4:12457870 chr04:012457870 0 W/12457870-12457870 FN554-S Single Base Substitution T-C INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3789-S.SNP.4:12462085 chr04:012462085 0 W/12462085-12462085 FN3789-S SNP C -> T AC=1;AN=190;BQB=0.976645;DP=3290;DP4=1494,1680,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0267477;MQB=0.00182788;MQSB=4.77322e-06;RPB=0.516684;SGB=39.9877;VDB=0.727693;EFF=INTRON(MODIFIER||||1599|LOC_Os04g22010|protein_coding|CODING|LOC_Os04g22010.1|3|1) FN2754-S.SNP.4:12463836 chr04:012463836 0 W/12463836-12463836 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.953105;DP=5537;DP4=2658,2624,4,6;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0798266;MQB=0.928257;MQSB=0;RPB=0.938933;SGB=40.4492;VDB=0.727693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P794L|1599|LOC_Os04g22010|protein_coding|CODING|LOC_Os04g22010.1|5|1) FN982-S.SNP.4:12464231 chr04:012464231 0 W/12464231-12464231 FN982-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g22010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN4098-S.SNP.4:12471907 chr04:012471907 0 W/12471907-12471907 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.934593;DP=2445;DP4=880,1512,1,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.51555e-06;MQSB=0.736558;RPB=0.94393;SGB=39.6007;VDB=0.868818;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R40|828|LOC_Os04g22020|protein_coding|CODING|LOC_Os04g22020.1|1|1) FN1252-S.SNP.4:12473906 chr04:012473906 0 W/12473906-12473906 FN1252-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g22020 retrotransposon protein, putative, unclassified, expressed SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2114-S.SNP.4:12477428 chr04:012477428 0 W/12477428-12477428 FN2114-S SNP A -> T AC=1;AN=168;BQB=0.288208;DP=3012;DP4=1336,1598,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.78563e-08;MQSB=0.886934;RPB=0.970018;SGB=-37.7974;VDB=0.287081;EFF=INTRON(MODIFIER||||910|LOC_Os04g22030|protein_coding|CODING|LOC_Os04g22030.1|2|1) FN530-S.SNP.4:12478871 chr04:012478871 0 W/12478871-12478871 FN530-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g22030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN4325-S.SNP.4:12484914 chr04:012484914 0 W/12484914-12484914 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.927179;DP=3002;DP4=1552,1377,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.7983e-11;MQSB=0.984576;RPB=0.89415;SGB=65.6427;VDB=0.480129;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S149|321|LOC_Os04g22050|protein_coding|CODING|LOC_Os04g22050.1|2|1) FN4325-S.SNP.4:12484915 chr04:012484915 0 W/12484915-12484915 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.918603;DP=2983;DP4=1539,1378,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.37616e-11;MQSB=0.968918;RPB=0.950087;SGB=65.6427;VDB=0.490062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S149F|321|LOC_Os04g22050|protein_coding|CODING|LOC_Os04g22050.1|2|1) FN3339-S.SNP.4:12487031 chr04:012487031 0 W/12487031-12487031 FN3339-S SNP G -> A AC=2;AN=184;BQB=0.706436;DP=2865;DP4=1276,1469,7,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.7462e-09;MQSB=0.749777;RPB=0.666921;SGB=75.8731;VDB=0.487151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.4:12489794 chr04:012489794 0 W/12489794-12489794 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.91127;DP=2750;DP4=1353,1300,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44456e-09;MQSB=0.746452;RPB=0.0596017;SGB=62.7569;VDB=0.0336585;EFF=INTRON(MODIFIER||||1414|LOC_Os04g22060|protein_coding|CODING|LOC_Os04g22060.1|5|1) FN2540-S.SNP.4:12492036 chr04:012492036 0 W/12492036-12492036 FN2540-S SNP T -> C AC=1;AN=198;BQB=0.0941867;DP=4181;DP4=1993,1872,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.7472e-07;MQSB=0.631549;RPB=0.242251;SGB=-9.07482;VDB=0.692759;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G740|1414|LOC_Os04g22060|protein_coding|CODING|LOC_Os04g22060.1|4|1) FN2410.SNP.4:12493438 chr04:012493438 0 W/12493438-12493438 FN2410 SNP T -> C AC=1;AN=200;BQB=0.686161;DP=4567;DP4=2139,1997,14,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61759e-22;MQSB=0.998402;RPB=0.898205;SGB=84.1935;VDB=0.943553;EFF=INTRON(MODIFIER||||1414|LOC_Os04g22060|protein_coding|CODING|LOC_Os04g22060.1|3|1) FN1222-S.SNP.4:12494931 chr04:012494931 0 W/12494931-12494931 FN1222-S Single Base Substitution G-C INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2662-S.SNP.4:12495712 chr04:012495712 0 W/12495712-12495712 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.93921;DP=5008;DP4=2108,2656,3,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52186e-11;MQSB=0.98841;RPB=0.820458;SGB=72.6852;VDB=0.606362;EFF=INTRON(MODIFIER||||150|LOC_Os04g22070|protein_coding|CODING|LOC_Os04g22070.1|2|1) FN-408.SNP.4:12497324 chr04:012497324 0 W/12497324-12497324 FN-408 Single Base Substitution G-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN3548-S.SNP.4:12503577 chr04:012503577 0 W/12503577-12503577 FN3548-S SNP G -> T AC=2;AN=188;BQB=0.990429;DP=2868;DP4=1399,1369,15,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.62769e-16;MQSB=0.679797;RPB=0.231985;SGB=92.677;VDB=0.462814;EFF=INTRON(MODIFIER||||389|LOC_Os04g22080|protein_coding|CODING|LOC_Os04g22080.1|2|1) FN2351.SNP.4:12507098 chr04:012507098 0 W/12507098-12507098 FN2351 SNP G -> C AC=1;AN=192;BQB=0.793445;DP=4941;DP4=2550,2058,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.9696e-12;MQSB=0.924413;RPB=0.695599;SGB=75.4235;VDB=0.621073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.4:12512212 chr04:012512212 0 W/12512212-12512212 FN2557-S SNP T -> C AC=1;AN=198;BQB=0.896581;DP=4165;DP4=2092,1891,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.98372e-07;MQSB=0.991514;RPB=0.0378314;SGB=58.7391;VDB=0.115538;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L237|1405|LOC_Os04g22090|protein_coding|CODING|LOC_Os04g22090.1|1|1) FN4125-S.SNP.4:12512948 chr04:012512948 0 W/12512948-12512948 FN4125-S SNP G -> A AC=2;AN=182;BQB=0.682078;DP=2834;DP4=1297,1468,8,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.49371e-09;MQSB=0.977552;RPB=0.845077;SGB=80.1982;VDB=0.421381;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.4:12513454 chr04:012513454 0 W/12513454-12513454 FN1106-S Single Base Substitution A-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN555-S.SNP.4:12517463 chr04:012517463 0 W/12517463-12517463 FN555-S Single Base Substitution G-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2723-S.SNP.4:12521245 chr04:012521245 0 W/12521245-12521245 FN2723-S SNP G -> A AC=2;AN=200;BQB=0.862116;DP=4714;DP4=2445,1895,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.32849e-25;MQSB=0.787794;RPB=0.731019;SGB=92.009;VDB=0.0153841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.4:12521246 chr04:012521246 0 W/12521246-12521246 FN2723-S SNP G -> A AC=2;AN=200;BQB=0.905267;DP=4729;DP4=2418,1891,24,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.02341e-25;MQSB=0.669334;RPB=0.38095;SGB=94.6142;VDB=0.00518894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.4:12525823 chr04:012525823 0 W/12525823-12525823 FN2374 SNP G -> A AC=1;AN=192;BQB=0.995119;DP=4868;DP4=2174,2395,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.9505e-05;MQSB=0.747188;RPB=0.95471;SGB=-34.4565;VDB=0.317419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D729N|1629|LOC_Os04g22110|protein_coding|CODING|LOC_Os04g22110.1|5|1) FN2448.SNP.4:12528077 chr04:012528077 0 W/12528077-12528077 FN2448 SNP C -> T AC=1;AN=200;BQB=0.988507;DP=5794;DP4=2380,3035,8,12;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.102692;MQB=0.642707;MQSB=0;RPB=0.98212;SGB=61.9006;VDB=0.951685;EFF=INTRON(MODIFIER||||1629|LOC_Os04g22110|protein_coding|CODING|LOC_Os04g22110.1|6|1) FN1666-S.SNP.4:12529557 chr04:012529557 0 W/12529557-12529557 FN1666-S SNP G -> A AC=1;AN=188;BQB=0.1724;DP=3462;DP4=2278,1143,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00028885;MQB=2.97693e-05;MQSB=0.0414916;RPB=0.850087;SGB=-35.081;VDB=0.45247;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1629|LOC_Os04g22110|protein_coding|CODING|LOC_Os04g22110.1|8|1),INTRON(MODIFIER||||1629|LOC_Os04g22110|protein_coding|CODING|LOC_Os04g22110.1|7|1);LOF=(LOC_Os04g22110|LOC_Os04g22110|1|1.00) FN950-S.SNP.4:12529939 chr04:012529939 0 W/12529939-12529939 FN950-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g22110 retrotransposon protein, putative, unclassified, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN3921-S.SNP.4:12532939 chr04:012532939 0 W/12532939-12532939 FN3921-S SNP A -> G AC=1;AN=158;BQB=0.204532;DP=2511;DP4=1291,1126,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.63972e-05;MQSB=0.846794;RPB=0.96602;SGB=27.3346;VDB=0.976777;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.4:12533306 chr04:012533306 0 W/12533306-12533306 FN769-S Single Base Substitution G-C INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN848-S.SNP.4:12538241 chr04:012538241 0 W/12538241-12538241 FN848-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g22120 protein kinase, putative, expressed SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3572-S.SNP.4:12540725 chr04:012540725 0 W/12540725-12540725 FN3572-S SNP T -> A AC=2;AN=188;BQB=0.873603;DP=2954;DP4=1238,1530,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.89588e-19;MQSB=0.996618;RPB=0.0115107;SGB=158.018;VDB=0.0579522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.4:12547651 chr04:012547651 0 W/12547651-12547651 FN3569-S SNP C -> A AC=1;AN=188;BQB=0.963953;DP=3079;DP4=1408,1619,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.26958e-12;MQSB=0.974098;RPB=0.806596;SGB=57.244;VDB=0.915042;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.4:12547853 chr04:012547853 0 W/12547853-12547853 FN499-S Single Base Substitution C-T INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN479-S.SNP.4:12555795 chr04:012555795 0 W/12555795-12555795 FN479-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g22160 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3443-S.SNP.4:12556749 chr04:012556749 0 W/12556749-12556749 FN3443-S SNP T -> A AC=2;AN=184;BQB=0.0045255;DP=2066;DP4=934,959,9,17;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0159729;MQB=0.00065162;MQSB=0.502423;RPB=0.37901;SGB=-71.0506;VDB=0.776301;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.4:12559031 chr04:012559031 0 W/12559031-12559031 FN912-S Single Base Substitution A-G INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2333.SNP.4:12561182 chr04:012561182 0 W/12561182-12561182 FN2333 SNP A -> C AC=1;AN=192;BQB=0.607684;DP=4566;DP4=2088,2160,9,16;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00109505;MQB=8.27867e-06;MQSB=6.39904e-06;RPB=0.427947;SGB=19.8696;VDB=0.985832;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aCa|K144T|321|LOC_Os04g22180|protein_coding|CODING|LOC_Os04g22180.1|2|1) FN2191-S.SNP.4:12565977 chr04:012565977 0 W/12565977-12565977 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.0767193;DP=4954;DP4=2303,2242,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79528e-11;MQSB=0.739386;RPB=0.82979;SGB=53.8699;VDB=0.365573;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.4:12566420 chr04:012566420 0 W/12566420-12566420 FN2583-S SNP T -> A AC=1;AN=200;BQB=0.686414;DP=5005;DP4=2333,2461,10,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0013986;MQB=3.64164e-10;MQSB=9.28561e-08;RPB=0.637513;SGB=15.9106;VDB=0.949217;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.4:12568938 chr04:012568938 0 W/12568938-12568938 FN1693-S SNP C -> A AC=2;AN=188;BQB=0.534487;DP=3592;DP4=1724,1827,14,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.51771e-09;MQSB=0.516592;RPB=0.469084;SGB=78.5038;VDB=0.996486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.4:12571863 chr04:012571863 0 W/12571863-12571863 FN2430 SNP C -> T AC=1;AN=200;BQB=0.95103;DP=4390;DP4=2068,2052,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.19313e-15;MQSB=0.74342;RPB=0.705386;SGB=127.947;VDB=0.450011;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H525|899|LOC_Os04g22190|protein_coding|CODING|LOC_Os04g22190.1|4|1) FN3613-S.SNP.4:12573793 chr04:012573793 0 W/12573793-12573793 FN3613-S SNP A -> G AC=2;AN=190;BQB=0.602843;DP=2830;DP4=1327,1269,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000353357;MQB=3.89041e-22;MQSB=0.904427;RPB=0.870821;SGB=180.22;VDB=0.525131;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L1539P|1578|LOC_Os04g22200|protein_coding|CODING|LOC_Os04g22200.1|10|1) FN2608-S.SNP.4:12576139 chr04:012576139 0 W/12576139-12576139 FN2608-S SNP A -> G AC=1;AN=196;BQB=0.754788;DP=4297;DP4=2158,1957,9,3;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=1.29993e-05;MQSB=0.861326;RPB=0.972379;SGB=32.9588;VDB=0.989616;EFF=SPLICE_SITE_REGION(LOW||||1578|LOC_Os04g22200|protein_coding|CODING|LOC_Os04g22200.1|6|1),INTRON(MODIFIER||||1578|LOC_Os04g22200|protein_coding|CODING|LOC_Os04g22200.1|6|1) FN-309.SNP.4:12581928 chr04:012581928 0 W/12581928-12581928 FN-309 Single Base Substitution G-A INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN3630-S.SNP.4:12596986 chr04:012596986 0 W/12596986-12596986 FN3630-S SNP A -> G AC=1;AN=190;BQB=0.183079;DP=2628;DP4=1329,1151,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11469e-07;MQSB=0.396001;RPB=0.368332;SGB=18.552;VDB=0.723337;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.4:12597770 chr04:012597770 0 W/12597770-12597770 FN1050-S Single Base Substitution A-C INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN4101-S.SNP.4:12600193 chr04:012600193 0 W/12600193-12600193 FN4101-S SNP T -> G AC=2;AN=182;BQB=0.999998;DP=2825;DP4=1330,1404,14,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.45245e-16;MQSB=0.999773;RPB=0.309433;SGB=120.796;VDB=0.0589829;EFF=INTRON(MODIFIER||||750|LOC_Os04g22240|protein_coding|CODING|LOC_Os04g22240.1|2|1) FN819-S.SNP.4:12608979 chr04:012608979 0 W/12608979-12608979 FN819-S Single Base Substitution G-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2588-S.SNP.4:12622551 chr04:012622551 0 W/12622551-12622551 FN2588-S SNP T -> G AC=1;AN=198;BQB=0.335838;DP=4445;DP4=2138,2114,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.72001e-12;MQSB=0.891792;RPB=0.98299;SGB=72.5051;VDB=0.826923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.4:12623543 chr04:012623543 0 W/12623543-12623543 FN3729-S SNP A -> G AC=1;AN=190;BQB=0.812135;DP=3148;DP4=1525,1479,18,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.99884e-14;MQSB=0.985182;RPB=0.558063;SGB=56.8601;VDB=0.84165;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.4:12624542 chr04:012624542 0 W/12624542-12624542 FN721-S Single Base Substitution G-A INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN-199.SNP.4:12629183 chr04:012629183 0 W/12629183-12629183 FN-199 Single Base Substitution G-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-199.SNP.4:12629186 chr04:012629186 0 W/12629186-12629186 FN-199 Single Base Substitution G-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3547-S.SNP.4:12632100 chr04:012632100 0 W/12632100-12632100 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.959373;DP=3444;DP4=1499,1880,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.44959e-08;MQSB=0.933324;RPB=0.917335;SGB=39.5276;VDB=0.262455;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A162V|170|LOC_Os04g22300|protein_coding|CODING|LOC_Os04g22300.1|2|1) FN2532-S.SNP.4:12633186 chr04:012633186 0 W/12633186-12633186 FN2532-S SNP T -> C AC=2;AN=196;BQB=0.814433;DP=3969;DP4=2022,1636,22,14;HOB=0.0201999;ICB=0.494951;MQ=49;MQ0F=0;MQB=9.11836e-18;MQSB=0.987016;RPB=0.999047;SGB=-83.7086;VDB=0.717828;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.4:12634400 chr04:012634400 0 W/12634400-12634400 FN1396-S Single Base Substitution A-G INTRON HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN764-S.SNP.4:12634430 chr04:012634430 0 W/12634430-12634430 FN764-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g22320 hypothetical protein SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2660-S.SNP.4:12638042 chr04:012638042 0 W/12638042-12638042 FN2660-S SNP T -> A AC=2;AN=200;BQB=0.833658;DP=5195;DP4=2562,2472,13,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.67647e-19;MQSB=0.998977;RPB=0.936607;SGB=132.552;VDB=0.57133;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.4:12642260 chr04:012642260 0 W/12642260-12642260 FN464-S Single Base Substitution C-G INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN824-S.SNP.4:12644507 chr04:012644507 0 W/12644507-12644507 FN824-S Single Base Substitution G-T INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2141-S.SNP.4:12645770 chr04:012645770 0 W/12645770-12645770 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.270114;DP=2120;DP4=627,1448,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.10454e-06;MQSB=0.886065;RPB=0.711749;SGB=-36.0898;VDB=0.0776399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.4:12648481 chr04:012648481 0 W/12648481-12648481 FN3782-S SNP G -> A AC=1;AN=190;BQB=0.958123;DP=2788;DP4=1497,1195,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77568e-05;MQSB=0.97348;RPB=0.944793;SGB=30.8803;VDB=0.387294;EFF=INTRON(MODIFIER||||593|LOC_Os04g22360|protein_coding|CODING|LOC_Os04g22360.1|3|1) FN2301.SNP.4:12669625 chr04:012669625 0 W/12669625-12669625 FN2301 SNP C -> T AC=2;AN=192;BQB=0.927003;DP=5166;DP4=2400,2342,20,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.64334e-16;MQSB=0.999458;RPB=0.989712;SGB=-42.2982;VDB=0.893511;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.4:12672351 chr04:012672351 0 W/12672351-12672351 FN1532-S Single Base Substitution T-A INTRON Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2589-S.SNP.4:12674939 chr04:012674939 0 W/12674939-12674939 FN2589-S SNP T -> A AC=1;AN=196;BQB=0.924486;DP=4416;DP4=2279,1982,8,9;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=6.33449e-11;MQSB=0.950959;RPB=0.46188;SGB=50.9344;VDB=0.5846;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.4:12676570 chr04:012676570 0 W/12676570-12676570 FN922-S Single Base Substitution G-A INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN4078-S.SNP.4:12677895 chr04:012677895 0 W/12677895-12677895 FN4078-S SNP G -> A AC=2;AN=182;BQB=0.802606;DP=2745;DP4=1464,1204,13,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.71846e-12;MQSB=0.992094;RPB=0.912213;SGB=98.2417;VDB=0.149054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.4:12679439 chr04:012679439 0 W/12679439-12679439 FN3465-S SNP G -> T AC=2;AN=184;BQB=0.668325;DP=2896;DP4=1615,1178,22,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.27838e-20;MQSB=0.703438;RPB=0.859971;SGB=179.874;VDB=0.0395702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.4:12679842 chr04:012679842 0 W/12679842-12679842 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.992476;DP=4936;DP4=2357,2290,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.99955e-13;MQSB=0.99498;RPB=0.857032;SGB=86.5007;VDB=0.421084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.4:12683143 chr04:012683143 0 W/12683143-12683143 FN3711-S SNP A -> T AC=1;AN=190;BQB=0.986049;DP=2931;DP4=1473,1317,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.78786e-08;MQSB=0.986284;RPB=0.921786;SGB=21.1058;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.4:12687985 chr04:012687985 0 W/12687985-12687985 FN1383-S Single Base Substitution C-G INTRON HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2349.SNP.4:12687985 chr04:012687985 0 W/12687985-12687985 FN2349 SNP C -> G AC=1;AN=192;BQB=0.697646;DP=5128;DP4=2357,2494,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000390016;MQB=3.59671e-09;MQSB=0.756958;RPB=0.980839;SGB=49.4287;VDB=0.708601;EFF=INTRON(MODIFIER||||746|LOC_Os04g22400|protein_coding|CODING|LOC_Os04g22400.1|2|1) FN3488-S.SNP.4:12687985 chr04:012687985 0 W/12687985-12687985 FN3488-S SNP C -> G AC=1;AN=184;BQB=0.786631;DP=2705;DP4=1156,1445,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00110906;MQB=0.000406414;MQSB=0.407582;RPB=0.327813;SGB=39.2697;VDB=0.300852;EFF=INTRON(MODIFIER||||746|LOC_Os04g22400|protein_coding|CODING|LOC_Os04g22400.1|2|1) FN698-S.SNP.4:12687985 chr04:012687985 0 W/12687985-12687985 FN698-S Single Base Substitution C-G INTRON HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1522-S.SNP.4:12688701 chr04:012688701 0 W/12688701-12688701 FN1522-S Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os04g22400 retrotransposon protein, putative, Ty1-copia subclass SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN922-S.SNP.4:12690719 chr04:012690719 0 W/12690719-12690719 FN922-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g22400 retrotransposon protein, putative, Ty1-copia subclass SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN632-S.SNP.4:12697035 chr04:012697035 0 W/12697035-12697035 FN632-S Single Base Substitution T-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN959-S.SNP.4:12702137 chr04:012702137 0 W/12702137-12702137 FN959-S Single Base Substitution G-A INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN775-S.SNP.4:12702951 chr04:012702951 0 W/12702951-12702951 FN775-S Single Base Substitution T-C INTERGENIC HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2177-S.SNP.4:12704001 chr04:012704001 0 W/12704001-12704001 FN2177-S SNP C -> A AC=1;AN=168;BQB=0.32175;DP=2732;DP4=1741,970,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000366032;MQB=8.50777e-05;MQSB=0.893926;RPB=0.71822;SGB=-35.5206;VDB=0.78371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.4:12708259 chr04:012708259 0 W/12708259-12708259 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.788062;DP=2752;DP4=1257,1257,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.11129e-06;MQSB=0.870286;RPB=0.690438;SGB=53.6492;VDB=0.964835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P51L|182|LOC_Os04g22440|protein_coding|CODING|LOC_Os04g22440.1|1|1) FN1556-S.SNP.4:12711656 chr04:012711656 0 W/12711656-12711656 FN1556-S Single Base Substitution G-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1501-S.SNP.4:12711760 chr04:012711760 0 W/12711760-12711760 FN1501-S Single Base Substitution A-C INTERGENIC Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3920-S.SNP.4:12713966 chr04:012713966 0 W/12713966-12713966 FN3920-S SNP C -> A AC=1;AN=158;BQB=0.842485;DP=2465;DP4=1207,1159,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.79014e-08;MQSB=0.918628;RPB=0.502523;SGB=37.4429;VDB=0.725469;EFF=INTRON(MODIFIER||||389|LOC_Os04g22460|protein_coding|CODING|LOC_Os04g22460.1|1|1) FN2572-S.SNP.4:12714507 chr04:012714507 0 W/12714507-12714507 FN2572-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g22460 retrotransposon protein, putative, unclassified, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2116-S.SNP.4:12719547 chr04:012719547 0 W/12719547-12719547 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.342688;DP=3985;DP4=1694,2246,13,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.04476e-13;MQSB=0.979528;RPB=0.712713;SGB=-80.6216;VDB=0.111939;EFF=INTRON(MODIFIER||||861|LOC_Os04g22470|protein_coding|CODING|LOC_Os04g22470.1|15|1) FN3909-S.SNP.4:12723246 chr04:012723246 0 W/12723246-12723246 FN3909-S SNP T -> A AC=1;AN=158;BQB=0.41907;DP=2229;DP4=1002,1132,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.98998e-06;MQSB=0.0623143;RPB=0.867633;SGB=-0.652741;VDB=0.892782;EFF=INTRON(MODIFIER||||861|LOC_Os04g22470|protein_coding|CODING|LOC_Os04g22470.1|4|1) FN2640-S.SNP.4:12728899 chr04:012728899 0 W/12728899-12728899 FN2640-S SNP G -> C AC=2;AN=200;BQB=0.982419;DP=4801;DP4=2221,2287,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.03911e-24;MQSB=0.858746;RPB=0.983727;SGB=94.6142;VDB=0.0862221;EFF=INTRON(MODIFIER||||232|LOC_Os04g22480|protein_coding|CODING|LOC_Os04g22480.1|1|1) FN_398-3-4-5.SNP.4:12729259 chr04:012729259 0 W/12729259-12729259 FN_398-3-4-5 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g22480 retrotransposon protein, putative, unclassified, expressed SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN-222.SNP.4:12731786 chr04:012731786 0 W/12731786-12731786 FN-222 Single Base Substitution C-T INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1492-S.SNP.4:12733642 chr04:012733642 0 W/12733642-12733642 FN1492-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g22490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1071-S.SNP.4:12734836 chr04:012734836 0 W/12734836-12734836 FN1071-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3600-S.SNP.4:12738443 chr04:012738443 0 W/12738443-12738443 FN3600-S SNP T -> C AC=2;AN=190;BQB=0.913311;DP=2682;DP4=1245,1301,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000745712;MQB=5.11061e-15;MQSB=0.389873;RPB=0.896304;SGB=103.624;VDB=0.642749;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.4:12739130 chr04:012739130 0 W/12739130-12739130 FN1642-S Single Base Substitution C-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1302-S.SNP.4:12739586 chr04:012739586 0 W/12739586-12739586 FN1302-S Single Base Substitution G-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3478-S.SNP.4:12740417 chr04:012740417 0 W/12740417-12740417 FN3478-S SNP G -> T AC=1;AN=184;BQB=0.564357;DP=2957;DP4=1367,1154,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000117347;MQSB=1.93617e-15;RPB=0.00814227;SGB=28.3187;VDB=0.0454826;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.4:12747430 chr04:012747430 0 W/12747430-12747430 FN-106 Single Base Substitution C-T INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2158-S.SNP.4:12751281 chr04:012751281 0 W/12751281-12751281 FN2158-S SNP G -> A AC=1;AN=168;BQB=0.258648;DP=2947;DP4=1933,981,14,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24145e-07;MQSB=0.994918;RPB=0.164312;SGB=-37.2282;VDB=0.55307;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.4:12752620 chr04:012752620 0 W/12752620-12752620 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1734-S.SNP.4:12754778 chr04:012754778 0 W/12754778-12754778 FN1734-S SNP G -> C AC=1;AN=188;BQB=0.242079;DP=1616;DP4=665,843,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.14238e-05;MQSB=0.990679;RPB=0.392662;SGB=13.3597;VDB=0.965232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.4:12757688 chr04:012757688 0 W/12757688-12757688 FN1008-S Single Base Substitution T-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN-236.SNP.4:12759603 chr04:012759603 0 W/12759603-12759603 FN-236 Single Base Substitution A-G INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3538-S.SNP.4:12763336 chr04:012763336 0 W/12763336-12763336 FN3538-S SNP A -> G AC=2;AN=188;BQB=0.726278;DP=3188;DP4=1696,1375,18,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.23872e-15;MQSB=0.243358;RPB=0.975989;SGB=31.7742;VDB=0.808515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.4:12765882 chr04:012765882 0 W/12765882-12765882 FN2765-S SNP C -> T AC=1;AN=196;BQB=0.451886;DP=3413;DP4=1466,1759,4,9;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.10319e-08;MQSB=0.841034;RPB=0.966174;SGB=54.144;VDB=0.460588;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.4:12769654 chr04:012769654 0 W/12769654-12769654 FN4068-S SNP C -> A AC=1;AN=182;BQB=0.929198;DP=3410;DP4=1763,1573,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.41374e-10;MQSB=0.911716;RPB=0.516001;SGB=66.6657;VDB=0.134516;EFF=INTRON(MODIFIER||||243|LOC_Os04g22550|protein_coding|CODING|LOC_Os04g22550.1|2|1) FN-165.SNP.4:12771900 chr04:012771900 0 W/12771900-12771900 FN-165 Single Base Substitution C-T INTERGENIC HOMO SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3666-S.SNP.4:12771900 chr04:012771900 0 W/12771900-12771900 FN3666-S SNP C -> T AC=2;AN=190;BQB=0.899053;DP=2698;DP4=1303,1255,15,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.13496e-20;MQSB=0.964377;RPB=0.122449;SGB=162.942;VDB=0.142403;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.4:12773000 chr04:012773000 0 W/12773000-12773000 FN2408 SNP G -> C AC=1;AN=200;BQB=0.98991;DP=4677;DP4=2090,2308,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47872e-06;MQSB=0.88952;RPB=0.71408;SGB=25.849;VDB=0.590704;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.4:12773920 chr04:012773920 0 W/12773920-12773920 FN485-S Single Base Substitution A-T INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3626-S.SNP.4:12774809 chr04:012774809 0 W/12774809-12774809 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.975074;DP=2730;DP4=1479,1174,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.26536e-07;MQSB=0.962363;RPB=0.893527;SGB=-2.10437;VDB=0.712309;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1417|1518|LOC_Os04g22570|protein_coding|CODING|LOC_Os04g22570.1|9|1) FN2619-S.SNP.4:12779148 chr04:012779148 0 W/12779148-12779148 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.536322;DP=3758;DP4=1725,1757,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.59207e-12;MQSB=0.833581;RPB=0.339664;SGB=90.9049;VDB=0.756395;EFF=INTRON(MODIFIER||||1518|LOC_Os04g22570|protein_coding|CODING|LOC_Os04g22570.1|4|1) FN4158-S.SNP.4:12783042 chr04:012783042 0 W/12783042-12783042 FN4158-S SNP C -> T AC=1;AN=170;BQB=0.967286;DP=2701;DP4=1334,1313,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0118475;MQB=0.503564;MQSB=0.306132;RPB=0.32351;SGB=56.7575;VDB=0.123433;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.4:12783441 chr04:012783441 0 W/12783441-12783441 W138-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g22580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2113-S.SNP.4:12785464 chr04:012785464 0 W/12785464-12785464 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.697198;DP=2913;DP4=1317,1558,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00137315;MQB=8.07186e-06;MQSB=0.999629;RPB=0.354974;SGB=51.902;VDB=0.196654;EFF=INTRON(MODIFIER||||990|LOC_Os04g22580|protein_coding|CODING|LOC_Os04g22580.1|1|1) FN2312.SNP.4:12786188 chr04:012786188 0 W/12786188-12786188 FN2312 SNP T -> C AC=1;AN=192;BQB=0.904775;DP=4513;DP4=2322,1905,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000443164;MQB=3.14566e-07;MQSB=0.998351;RPB=0.459081;SGB=18.6565;VDB=0.862629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C950R|990|LOC_Os04g22580|protein_coding|CODING|LOC_Os04g22580.1|2|1) FN-148.SNP.4:12787850 chr04:012787850 0 W/12787850-12787850 FN-148 Single Base Substitution C-T INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2447.SNP.4:12788948 chr04:012788948 0 W/12788948-12788948 FN2447 SNP G -> T AC=1;AN=200;BQB=0.00802319;DP=4206;DP4=1931,2087,5,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00356633;MQB=6.74044e-07;MQSB=0.294581;RPB=0.1526;SGB=21.6694;VDB=0.778595;EFF=INTRON(MODIFIER||||774|LOC_Os04g22590|protein_coding|CODING|LOC_Os04g22590.1|1|1) FN579-S.SNP.4:12791442 chr04:012791442 0 W/12791442-12791442 FN579-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g22590 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1508-S.SNP.4:12792495 chr04:012792495 0 W/12792495-12792495 FN1508-S Single Base Substitution C-A INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2323.SNP.4:12795171 chr04:012795171 0 W/12795171-12795171 FN2323 SNP G -> C AC=1;AN=192;BQB=0.602983;DP=5175;DP4=2688,2046,16,19;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0119807;MQB=0.385165;MQSB=0;RPB=0.32949;SGB=-4.04606;VDB=0.266444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.4:12796640 chr04:012796640 0 W/12796640-12796640 FN1407-S Single Base Substitution G-T INTRON Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2792-S.SNP.4:12797121 chr04:012797121 0 W/12797121-12797121 FN2792-S SNP C -> T AC=1;AN=198;BQB=0.933168;DP=4166;DP4=1816,2101,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00504081;MQB=0.000629696;MQSB=0.0604732;RPB=0.466007;SGB=29.3637;VDB=0.207563;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R168C|1514|LOC_Os04g22600|protein_coding|CODING|LOC_Os04g22600.1|4|1) W360-2S-2.SNP.4:12797621 chr04:012797621 0 W/12797621-12797621 W360-2S-2 Single Base Substitution G-A INTRON HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1563-S.SNP.4:12799540 chr04:012799540 0 W/12799540-12799540 FN1563-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2648-S.SNP.4:12800103 chr04:012800103 0 W/12800103-12800103 FN2648-S SNP C -> A AC=1;AN=200;BQB=0.872812;DP=4982;DP4=2340,2323,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200723;MQB=1.16697e-13;MQSB=0.97313;RPB=0.894438;SGB=83.5316;VDB=0.741278;EFF=INTRON(MODIFIER||||1514|LOC_Os04g22600|protein_coding|CODING|LOC_Os04g22600.1|7|1) FN521-S.SNP.4:12807171 chr04:012807171 0 W/12807171-12807171 FN521-S Single Base Substitution C-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3967-S.SNP.4:12811071 chr04:012811071 0 W/12811071-12811071 FN3967-S SNP G -> T AC=1;AN=182;BQB=0.828739;DP=3097;DP4=1425,1581,15,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.9874e-11;MQSB=0.999197;RPB=0.466732;SGB=98.2417;VDB=0.325815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K936N|963|LOC_Os04g22610|protein_coding|CODING|LOC_Os04g22610.1|8|1) FN3553-S.SNP.4:12815753 chr04:012815753 0 W/12815753-12815753 FN3553-S SNP G -> A AC=1;AN=188;BQB=0.97217;DP=3270;DP4=1623,1562,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.37326e-12;MQSB=0.856879;RPB=0.692134;SGB=89.8686;VDB=0.033192;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.4:12830110 chr04:012830110 0 W/12830110-12830110 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.958533;DP=2336;DP4=1083,1206,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.62747e-08;MQSB=0.925247;RPB=0.272779;SGB=52.3148;VDB=0.344457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.4:12830665 chr04:012830665 0 W/12830665-12830665 FN2596-S SNP C -> T AC=1;AN=196;BQB=0.993496;DP=4020;DP4=2002,1836,7,7;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=7.96248e-08;MQSB=0.907888;RPB=0.932699;SGB=21.559;VDB=0.412929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-S.SNP.4:12833312 chr04:012833312 0 W/12833312-12833312 FN1156-S Single Base Substitution G-A INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN846-S.SNP.4:12835681 chr04:012835681 0 W/12835681-12835681 FN846-S Single Base Substitution C-G INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1444-S.SNP.4:12837871 chr04:012837871 0 W/12837871-12837871 FN1444-S Single Base Substitution G-T INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN4124-S.SNP.4:12838311 chr04:012838311 0 W/12838311-12838311 FN4124-S SNP G -> A AC=1;AN=182;BQB=0.920686;DP=3049;DP4=1787,1183,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.75997e-10;MQSB=0.997172;RPB=0.354618;SGB=75.6874;VDB=0.170533;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.4:12839314 chr04:012839314 0 W/12839314-12839314 FN4240-S SNP T -> A AC=2;AN=170;BQB=0.914668;DP=2203;DP4=888,1211,14,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20746e-15;MQSB=0.894507;RPB=0.582339;SGB=105.627;VDB=0.51895;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.4:12840587 chr04:012840587 0 W/12840587-12840587 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.835288;DP=3094;DP4=1522,1508,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.18942e-08;MQSB=0.992111;RPB=0.507481;SGB=46.3132;VDB=0.990054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.4:12847106 chr04:012847106 0 W/12847106-12847106 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.953681;DP=4470;DP4=1947,2391,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.3592e-10;MQSB=0.502678;RPB=0.352247;SGB=33.3622;VDB=0.0644273;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.4:12848890 chr04:012848890 0 W/12848890-12848890 FN4152-S SNP C -> T AC=2;AN=170;BQB=0.299944;DP=2945;DP4=1422,1433,17,14;HOB=0.0232526;ICB=0.494188;MQ=32;MQ0F=0.0713073;MQB=0.86708;MQSB=4.15609e-07;RPB=0.841864;SGB=132.282;VDB=0.739058;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.4:12849927 chr04:012849927 0 W/12849927-12849927 FN1586-S Single Base Substitution G-A INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN900-S.SNP.4:12850652 chr04:012850652 0 W/12850652-12850652 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN1045-S.SNP.4:12855425 chr04:012855425 0 W/12855425-12855425 FN1045-S Single Base Substitution T-C INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3426-S.SNP.4:12856187 chr04:012856187 0 W/12856187-12856187 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.413671;DP=3166;DP4=1551,1501,10,17;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0180038;MQB=0.0289047;MQSB=0.00100884;RPB=0.623533;SGB=116.569;VDB=0.73826;EFF=INTERGENIC(MODIFIER||||||||||1) FN471-S.SNP.4:12859990 chr04:012859990 0 W/12859990-12859990 FN471-S Single Base Substitution A-T INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN471-S.SNP.4:12859991 chr04:012859991 0 W/12859991-12859991 FN471-S Single Base Substitution A-T INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3384-S.SNP.4:12863449 chr04:012863449 0 W/12863449-12863449 FN3384-S SNP T -> A AC=1;AN=184;BQB=0.994024;DP=3009;DP4=1360,1570,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000332336;MQB=1.6079e-09;MQSB=0.88259;RPB=0.998515;SGB=66.8296;VDB=0.539692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I758F|1463|LOC_Os04g22690|protein_coding|CODING|LOC_Os04g22690.1|6|1) FN1006-S.SNP.4:12865207 chr04:012865207 0 W/12865207-12865207 FN1006-S Single Base Substitution G-A INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3416-S.SNP.4:12875174 chr04:012875174 0 W/12875174-12875174 FN3416-S SNP A -> C AC=1;AN=184;BQB=0.230702;DP=2847;DP4=1420,1316,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0126449;MQB=0.237759;MQSB=2.02094e-09;RPB=0.913725;SGB=15.7097;VDB=0.0330389;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:12880070 chr04:012880070 0 W/12880070-12880070 FN1557-S Single Base Substitution G-T INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1557-S.SNP.4:12880071 chr04:012880071 0 W/12880071-12880071 FN1557-S Single Base Substitution G-T INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1250-S.SNP.4:12881188 chr04:012881188 0 W/12881188-12881188 FN1250-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g22720 expressed protein SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN998-S.SNP.4:12881329 chr04:012881329 0 W/12881329-12881329 FN998-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os04g22720 expressed protein SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN998-S.SNP.4:12881330 chr04:012881330 0 W/12881330-12881330 FN998-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g22720 expressed protein SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1764-S.SNP.4:12883482 chr04:012883482 0 W/12883482-12883482 FN1764-S SNP A -> G AC=1;AN=188;BQB=0.0577288;DP=3570;DP4=1802,1742,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.66805e-05;MQSB=0.0145181;RPB=0.994338;SGB=-61.9025;VDB=0.277213;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.4:12890685 chr04:012890685 0 W/12890685-12890685 FN1481-S Single Base Substitution A-T INTERGENIC Homo SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2115-S.SNP.4:12894022 chr04:012894022 0 W/12894022-12894022 FN2115-S SNP A -> G AC=2;AN=168;BQB=0.775854;DP=2289;DP4=1006,1181,17,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.32915e-17;MQSB=0.585815;RPB=0.108702;SGB=74.1551;VDB=0.588277;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.4:12894164 chr04:012894164 0 W/12894164-12894164 FN549-S Single Base Substitution C-T INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.4:12897839 chr04:012897839 0 W/12897839-12897839 FN1156-XA21 Single Base Substitution C-T INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2666-S.SNP.4:12905238 chr04:012905238 0 W/12905238-12905238 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.986025;DP=4795;DP4=2201,2327,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03748e-14;MQSB=0.985421;RPB=0.978514;SGB=17.5158;VDB=0.417736;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D172Y|709|LOC_Os04g22790|protein_coding|CODING|LOC_Os04g22790.1|2|1) FN1285-S.SNP.4:12905308 chr04:012905308 0 W/12905308-12905308 FN1285-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2194-S.SNP.4:12907628 chr04:012907628 0 W/12907628-12907628 FN2194-S SNP A -> G AC=2;AN=190;BQB=0.597476;DP=5035;DP4=2185,2534,24,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.70278e-36;MQSB=0.336324;RPB=0.466648;SGB=210.241;VDB=0.0194037;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.4:12909035 chr04:012909035 0 W/12909035-12909035 FN4043-S SNP T -> G AC=2;AN=168;BQB=0.991229;DP=2598;DP4=1337,1150,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.72857e-18;MQSB=0.870578;RPB=0.995372;SGB=131.927;VDB=0.820707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.4:12915332 chr04:012915332 0 W/12915332-12915332 FN2488 SNP G -> C AC=2;AN=200;BQB=0.271413;DP=4394;DP4=2129,1958,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.29084e-15;MQSB=0.503586;RPB=0.874851;SGB=27.1468;VDB=0.505265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.4:12916927 chr04:012916927 0 W/12916927-12916927 FN1205-S Single Base Substitution T-G INTRON HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN742-S.SNP.4:12920825 chr04:012920825 0 W/12920825-12920825 FN742-S Single Base Substitution C-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1458-S.SNP.4:12920960 chr04:012920960 0 W/12920960-12920960 FN1458-S Single Base Substitution A-G INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN4107-S.SNP.4:12924077 chr04:012924077 0 W/12924077-12924077 FN4107-S SNP T -> G AC=1;AN=182;BQB=0.96677;DP=3065;DP4=1513,1480,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.44132e-06;MQSB=0.96346;RPB=0.887913;SGB=35.0899;VDB=0.75912;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tGa|L307*|421|LOC_Os04g22810|protein_coding|CODING|LOC_Os04g22810.1|4|1);LOF=(LOC_Os04g22810|LOC_Os04g22810|1|1.00);NMD=(LOC_Os04g22810|LOC_Os04g22810|1|1.00) FN1037-S.SNP.4:12926076 chr04:012926076 0 W/12926076-12926076 FN1037-S Single Base Substitution G-C INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN-222.SNP.4:12926974 chr04:012926974 0 W/12926974-12926974 FN-222 Single Base Substitution A-C INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1527-S.SNP.4:12929522 chr04:012929522 0 W/12929522-12929522 FN1527-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g22830 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN571-S.SNP.4:12933098 chr04:012933098 0 W/12933098-12933098 FN571-S Single Base Substitution T-A INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN-212.SNP.4:12933968 chr04:012933968 0 W/12933968-12933968 FN-212 Single Base Substitution A-T INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN840-S.SNP.4:12940673 chr04:012940673 0 W/12940673-12940673 FN840-S Single Base Substitution T-A INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3970-S.SNP.4:12941713 chr04:012941713 0 W/12941713-12941713 FN3970-S SNP A -> G AC=1;AN=168;BQB=0.954093;DP=2651;DP4=891,1599,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00867597;MQB=0.066048;MQSB=5.01771e-11;RPB=0.736351;SGB=74.3269;VDB=0.113873;EFF=INTRON(MODIFIER||||591|LOC_Os04g22840|protein_coding|CODING|LOC_Os04g22840.1|1|1) FN1505-S.SNP.4:12949922 chr04:012949922 0 W/12949922-12949922 FN1505-S Single Base Substitution T-G INTERGENIC Homo SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2317.SNP.4:12961490 chr04:012961490 0 W/12961490-12961490 FN2317 SNP T -> C AC=1;AN=192;BQB=0.729876;DP=4814;DP4=2405,2157,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.9768e-09;MQSB=0.976044;RPB=0.894933;SGB=28.9139;VDB=0.442174;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.4:12964274 chr04:012964274 0 W/12964274-12964274 FN517-S Single Base Substitution G-A INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2410.SNP.4:12964489 chr04:012964489 0 W/12964489-12964489 FN2410 SNP C -> A AC=1;AN=200;BQB=0.618891;DP=4811;DP4=2308,2196,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00228643;MQB=1.08974e-06;MQSB=0.849793;RPB=0.579445;SGB=54.2646;VDB=0.902512;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.4:12967635 chr04:012967635 0 W/12967635-12967635 FN430-S Single Base Substitution C-A INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1459-S.SNP.4:12970453 chr04:012970453 0 W/12970453-12970453 FN1459-S Single Base Substitution C-G INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN3807-S.SNP.4:12980758 chr04:012980758 0 W/12980758-12980758 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.99488;DP=2951;DP4=1456,1409,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41407e-06;MQSB=0.999994;RPB=0.999476;SGB=28.9929;VDB=0.523537;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.4:12986524 chr04:012986524 0 W/12986524-12986524 FN-83 Single Base Substitution A-C INTERGENIC HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3981-S.SNP.4:12988913 chr04:012988913 0 W/12988913-12988913 FN3981-S SNP A -> G AC=1;AN=168;BQB=0.912852;DP=2481;DP4=1110,1298,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29461e-10;MQSB=0.778935;RPB=0.99057;SGB=5.62151;VDB=0.416966;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.4:12992959 chr04:012992959 0 W/12992959-12992959 FN-349 Single Base Substitution T-C UTR_3_PRIME HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1339-S.SNP.4:12994126 chr04:012994126 0 W/12994126-12994126 FN1339-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN-285.SNP.4:12999371 chr04:012999371 0 W/12999371-12999371 FN-285 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.4:12999371 chr04:012999371 0 W/12999371-12999371 FN1278-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3535-S.SNP.4:12999371 chr04:012999371 0 W/12999371-12999371 FN3535-S SNP G -> T AC=1;AN=188;BQB=0.864551;DP=2608;DP4=1276,1285,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.86589e-06;MQSB=0.98645;RPB=0.776751;SGB=28.8977;VDB=0.71094;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I75|258|LOC_Os04g22910|protein_coding|CODING|LOC_Os04g22910.1|1|1) FN-129.SNP.4:13001965 chr04:013001965 0 W/13001965-13001965 FN-129 Single Base Substitution C-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2690-S.SNP.4:13004766 chr04:013004766 0 W/13004766-13004766 FN2690-S SNP A -> G AC=1;AN=200;BQB=0.79536;DP=5086;DP4=2495,2412,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11545e-09;MQSB=0.981446;RPB=0.890754;SGB=29.4849;VDB=0.243468;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.4:13007908 chr04:013007908 0 W/13007908-13007908 FN2707-S SNP T -> A AC=1;AN=200;BQB=0.969072;DP=5116;DP4=2732,2169,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.91054e-07;MQSB=0.998895;RPB=0.942345;SGB=36.6644;VDB=0.932042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.4:13009344 chr04:013009344 0 W/13009344-13009344 FN3846-S SNP C -> G AC=1;AN=190;BQB=0.948583;DP=2354;DP4=1092,1169,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31414e-08;MQSB=0.972122;RPB=0.986376;SGB=36.1006;VDB=0.724296;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.4:13015660 chr04:013015660 0 W/13015660-13015660 FN-185 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g22930 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN985-S.SNP.4:13025651 chr04:013025651 0 W/13025651-13025651 FN985-S Single Base Substitution G-A INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN464-S.SNP.4:13027194 chr04:013027194 0 W/13027194-13027194 FN464-S Single Base Substitution C-T INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN1749-S.SNP.4:13030639 chr04:013030639 0 W/13030639-13030639 FN1749-S SNP T -> A AC=1;AN=188;BQB=0.937838;DP=1698;DP4=785,872,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.81934e-05;MQSB=0.999758;RPB=0.344319;SGB=26.2637;VDB=0.422204;EFF=INTRON(MODIFIER||||610|LOC_Os04g22960|protein_coding|CODING|LOC_Os04g22960.1|1|1) FN3571-S.SNP.4:13031214 chr04:013031214 0 W/13031214-13031214 FN3571-S SNP C -> G AC=1;AN=188;BQB=0.999568;DP=4527;DP4=2223,2227,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.85234e-13;MQSB=0.827757;RPB=0.102838;SGB=94.4119;VDB=0.0168827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A181G|610|LOC_Os04g22960|protein_coding|CODING|LOC_Os04g22960.1|2|1) FN4084-S.SNP.4:13033682 chr04:013033682 0 W/13033682-13033682 FN4084-S SNP C -> T AC=1;AN=182;BQB=0.999612;DP=3106;DP4=1591,1443,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=3.11645e-06;MQSB=0.999505;RPB=0.665271;SGB=57.644;VDB=0.652204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.4:13039051 chr04:013039051 0 W/13039051-13039051 FN3400-S SNP T -> G AC=1;AN=184;BQB=0.982183;DP=3189;DP4=1658,1461,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0761994;MQB=0.372141;MQSB=6.29423e-22;RPB=0.618962;SGB=35.1773;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.4:13045441 chr04:013045441 0 W/13045441-13045441 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.991382;DP=3401;DP4=2006,1246,18,10;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0.100559;MQB=0.915164;MQSB=1.05697e-40;RPB=0.769385;SGB=23.542;VDB=0.27407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.4:13045937 chr04:013045937 0 W/13045937-13045937 FN1241-S Single Base Substitution T-A INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN896-S.SNP.4:13048270 chr04:013048270 0 W/13048270-13048270 FN896-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN-350.SNP.4:13049966 chr04:013049966 0 W/13049966-13049966 FN-350 Single Base Substitution G-C STOP_GAINED HET LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN509-S.SNP.4:13051799 chr04:013051799 0 W/13051799-13051799 FN509-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN-5.SNP.4:13054145 chr04:013054145 0 W/13054145-13054145 FN-5 Single Base Substitution G-A INTRON Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN2449.SNP.4:13055386 chr04:013055386 0 W/13055386-13055386 FN2449 SNP T -> A AC=2;AN=200;BQB=0.646237;DP=5350;DP4=2332,2593,24,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.48178e-22;MQSB=0.856934;RPB=0.224191;SGB=49.6192;VDB=0.821657;EFF=INTRON(MODIFIER||||2074|LOC_Os04g22990|protein_coding|CODING|LOC_Os04g22990.1|3|1) FN1320-S.SNP.4:13056714 chr04:013056714 0 W/13056714-13056714 FN1320-S Single Base Substitution C-T INTRON HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN979-S.SNP.4:13057818 chr04:013057818 0 W/13057818-13057818 FN979-S Single Base Substitution C-T INTRON HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2485.SNP.4:13059975 chr04:013059975 0 W/13059975-13059975 FN2485 SNP T -> G AC=1;AN=200;BQB=0.473447;DP=4686;DP4=2008,2393,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10487e-15;MQSB=0.97274;RPB=0.97225;SGB=79.9264;VDB=0.246479;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.4:13064750 chr04:013064750 0 W/13064750-13064750 FN389-S Single Base Substitution T-A INTERGENIC HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2160-S.SNP.4:13065631 chr04:013065631 0 W/13065631-13065631 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.255009;DP=3490;DP4=1671,1785,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00974212;MQB=1.06544e-09;MQSB=1.6547e-07;RPB=0.504184;SGB=-90.3546;VDB=0.199618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.4:13066973 chr04:013066973 0 W/13066973-13066973 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.608588;DP=3732;DP4=1496,1924,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000267953;MQB=1.68621e-07;MQSB=0.798871;RPB=0.913979;SGB=76.4186;VDB=0.664918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.4:13067954 chr04:013067954 0 W/13067954-13067954 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.867321;DP=4875;DP4=2262,2372,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87284e-17;MQSB=0.993788;RPB=0.185168;SGB=118.737;VDB=0.219565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S187Y|1273|LOC_Os04g23020|protein_coding|CODING|LOC_Os04g23020.1|2|1) FN892-S.SNP.4:13068376 chr04:013068376 0 W/13068376-13068376 FN892-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g23020 retrotransposon protein, putative, unclassified, expressed SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN953-S.SNP.4:13068376 chr04:013068376 0 W/13068376-13068376 FN953-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g23020 retrotransposon protein, putative, unclassified, expressed SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3695-S.SNP.4:13073085 chr04:013073085 0 W/13073085-13073085 FN3695-S SNP G -> C AC=1;AN=190;BQB=0.999995;DP=2227;DP4=1022,1073,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0637629;MQB=0.380803;MQSB=4.03339e-12;RPB=0.921081;SGB=25.439;VDB=0.123955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.4:13074203 chr04:013074203 0 W/13074203-13074203 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.819095;DP=4168;DP4=1910,1900,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00863724;MQB=0.28755;MQSB=9.38992e-05;RPB=0.862441;SGB=-39.4473;VDB=0.955795;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.4:13074275 chr04:013074275 0 W/13074275-13074275 FN391-S Single Base Substitution T-C INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3528-S.SNP.4:13079035 chr04:013079035 0 W/13079035-13079035 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.955163;DP=3128;DP4=1383,1668,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.89674e-12;MQSB=0.708114;RPB=0.503591;SGB=94.4119;VDB=0.782824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S12L|446|LOC_Os04g23030|protein_coding|CODING|LOC_Os04g23030.1|1|1) FN3115-S.SNP.4:13079999 chr04:013079999 0 W/13079999-13079999 FN3115-S SNP T -> A AC=1;AN=184;BQB=0.967428;DP=2639;DP4=1410,1072,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63941e-09;MQSB=0.974984;RPB=0.458833;SGB=39.2697;VDB=0.0714772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.4:13080000 chr04:013080000 0 W/13080000-13080000 FN3115-S SNP C -> A AC=1;AN=184;BQB=0.549757;DP=2625;DP4=1419,1062,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.69778e-08;MQSB=0.992721;RPB=0.714184;SGB=48.7425;VDB=0.0981463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.4:13080005 chr04:013080005 0 W/13080005-13080005 FN3115-S SNP G -> A AC=1;AN=184;BQB=0.906531;DP=2603;DP4=1411,1061,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54693e-08;MQSB=0.886491;RPB=0.927659;SGB=48.7425;VDB=0.0964083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.4:13080978 chr04:013080978 0 W/13080978-13080978 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2673-S.SNP.4:13082613 chr04:013082613 0 W/13082613-13082613 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.604233;DP=5119;DP4=2612,2193,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.88731e-16;MQSB=0.99532;RPB=0.97598;SGB=79.9264;VDB=0.156161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.4:13083421 chr04:013083421 0 W/13083421-13083421 FN3465-S SNP T -> C AC=2;AN=184;BQB=0.769817;DP=2791;DP4=1313,1344,27,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.78593e-26;MQSB=0.992315;RPB=0.389159;SGB=156.081;VDB=0.059807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.4:13090814 chr04:013090814 0 W/13090814-13090814 FN1556-S Single Base Substitution A-G INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2452.SNP.4:13091032 chr04:013091032 0 W/13091032-13091032 FN2452 SNP A -> G AC=2;AN=200;BQB=0.628356;DP=4823;DP4=2256,2332,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.28767e-21;MQSB=0.943506;RPB=0.927563;SGB=76.378;VDB=0.362955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:13091793 chr04:013091793 0 W/13091793-13091793 FN2657-S SNP T -> C AC=2;AN=200;BQB=0.616172;DP=5005;DP4=2224,2376,36,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.39068e-33;MQSB=0.863688;RPB=0.950736;SGB=15.9379;VDB=0.600404;EFF=INTRON(MODIFIER||||81|LOC_Os04g23050|protein_coding|CODING|LOC_Os04g23050.1|1|1) FN735-S.SNP.4:13099616 chr04:013099616 0 W/13099616-13099616 FN735-S Single Base Substitution A-G INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN-283.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN-283 Single Base Substitution C-T INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1085-S.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN1085-S Single Base Substitution C-T INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2163-S.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN2163-S SNP C -> T AC=1;AN=168;BQB=0.999764;DP=2051;DP4=1109,896,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.48427e-05;MQSB=0.966536;RPB=0.749855;SGB=-0.101747;VDB=0.477712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN2375 SNP C -> T AC=2;AN=192;BQB=0.0926768;DP=4479;DP4=2278,1704,18,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.92237e-12;MQSB=0.177272;RPB=0.833042;SGB=-148.54;VDB=0.614085;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN4183-S SNP C -> T AC=2;AN=170;BQB=0.999073;DP=2222;DP4=1178,969,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.80333e-12;MQSB=0.8698;RPB=0.641831;SGB=72.7472;VDB=0.600741;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN964-S.SNP.4:13103088 chr04:013103088 0 W/13103088-13103088 FN964-S Single Base Substitution C-T INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1455-S.SNP.4:13103165 chr04:013103165 0 W/13103165-13103165 FN1455-S Single Base Substitution G-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2646-S.SNP.4:13105743 chr04:013105743 0 W/13105743-13105743 FN2646-S SNP T -> G AC=2;AN=200;BQB=0.834785;DP=4556;DP4=2114,2247,25,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.99267e-33;MQSB=0.913466;RPB=0.492222;SGB=191.687;VDB=0.309079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.4:13106460 chr04:013106460 0 W/13106460-13106460 FN2304 SNP A -> G AC=1;AN=192;BQB=0.98171;DP=4710;DP4=2365,1950,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0029724;MQB=3.98206e-11;MQSB=0.715066;RPB=0.456669;SGB=-6.30345;VDB=0.49008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.4:13106903 chr04:013106903 0 W/13106903-13106903 FN3399-S SNP T -> C AC=1;AN=184;BQB=0.757371;DP=2632;DP4=1183,1330,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0102584;MQB=0.00240754;MQSB=0.0331522;RPB=0.293877;SGB=10.6662;VDB=0.909421;EFF=INTRON(MODIFIER||||927|LOC_Os04g23070|protein_coding|CODING|LOC_Os04g23070.1|2|1) FN2471.SNP.4:13116696 chr04:013116696 0 W/13116696-13116696 FN2471 SNP T -> C AC=1;AN=200;BQB=0.0938966;DP=4674;DP4=2092,2234,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.41249e-15;MQSB=0.97529;RPB=0.115071;SGB=104.921;VDB=0.339822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.4:13120315 chr04:013120315 0 W/13120315-13120315 FN2252-S SNP G -> A AC=2;AN=190;BQB=0.420321;DP=5450;DP4=2311,2730,26,21;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00770642;MQB=8.83541e-17;MQSB=1.41368e-10;RPB=0.995701;SGB=53.8352;VDB=0.831308;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.4:13121023 chr04:013121023 0 W/13121023-13121023 FN534-S Single Base Substitution G-A INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1504-S.SNP.4:13121429 chr04:013121429 0 W/13121429-13121429 FN1504-S Single Base Substitution C-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2365.SNP.4:13129166 chr04:013129166 0 W/13129166-13129166 FN2365 SNP T -> A AC=2;AN=192;BQB=0.968597;DP=4791;DP4=2192,2143,34,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000208725;MQB=1.55106e-19;MQSB=0.999883;RPB=0.643657;SGB=-259.505;VDB=0.736023;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.4:13132910 chr04:013132910 0 W/13132910-13132910 FN1586-S Single Base Substitution C-T INTERGENIC Homo SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1660-S.SNP.4:13136832 chr04:013136832 0 W/13136832-13136832 FN1660-S Single Base Substitution A-G INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1252-S.SNP.4:13144745 chr04:013144745 0 W/13144745-13144745 FN1252-S Single Base Substitution C-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2146-S.SNP.4:13160012 chr04:013160012 0 W/13160012-13160012 FN2146-S SNP A -> T AC=1;AN=168;BQB=0.311815;DP=3865;DP4=1779,2058,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.30347e-06;MQSB=0.987723;RPB=0.986837;SGB=19.7539;VDB=0.646701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.4:13160013 chr04:013160013 0 W/13160013-13160013 FN2146-S SNP G -> T AC=1;AN=168;BQB=0.404317;DP=3878;DP4=1796,2055,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18367e-06;MQSB=0.993282;RPB=0.940624;SGB=34.748;VDB=0.57684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.4:13161026 chr04:013161026 0 W/13161026-13161026 FN1407-S Single Base Substitution T-C INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN4140-S.SNP.4:13164060 chr04:013164060 0 W/13164060-13164060 FN4140-S SNP T -> C AC=1;AN=170;BQB=0.94666;DP=2471;DP4=1348,1045,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.33644e-06;MQSB=0.999066;RPB=0.361509;SGB=43.4296;VDB=0.0415531;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.4:13167019 chr04:013167019 0 W/13167019-13167019 FN4221-S SNP A -> T AC=2;AN=170;BQB=0.943616;DP=2296;DP4=994,1251,8,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.04038e-11;MQSB=0.919919;RPB=0.645312;SGB=48.6486;VDB=0.331282;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.4:13168173 chr04:013168173 0 W/13168173-13168173 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1525-S.SNP.4:13172648 chr04:013172648 0 W/13172648-13172648 FN1525-S Single Base Substitution C-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2622-S.SNP.4:13173998 chr04:013173998 0 W/13173998-13173998 FN2622-S SNP A -> G AC=1;AN=200;BQB=0.844355;DP=4729;DP4=2387,1993,22,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.48116e-18;MQSB=3.13072e-10;RPB=0.970603;SGB=41.5933;VDB=0.558476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.4:13175011 chr04:013175011 0 W/13175011-13175011 FN2454 SNP T -> C AC=1;AN=200;BQB=0.963367;DP=4265;DP4=2357,1632,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000118783;MQSB=1.26073e-05;RPB=0.738951;SGB=22.2439;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.4:13175106 chr04:013175106 0 W/13175106-13175106 FN-188 Single Base Substitution C-T INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3966-S.SNP.4:13181217 chr04:013181217 0 W/13181217-13181217 FN3966-S SNP C -> A AC=1;AN=168;BQB=0.964718;DP=2423;DP4=1247,1097,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.10677e-08;MQSB=0.927062;RPB=0.925565;SGB=47.7421;VDB=0.246406;EFF=INTRON(MODIFIER||||472|LOC_Os04g23180|protein_coding|CODING|LOC_Os04g23180.1|4|1) FN3452-S.SNP.4:13182172 chr04:013182172 0 W/13182172-13182172 FN3452-S SNP A -> T AC=1;AN=184;BQB=0.449893;DP=2978;DP4=1661,1201,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00130463;MQSB=0.859166;RPB=0.0130598;SGB=25.1826;VDB=0.0934367;EFF=INTRON(MODIFIER||||472|LOC_Os04g23180|protein_coding|CODING|LOC_Os04g23180.1|2|1) FN1552-S.SNP.4:13182618 chr04:013182618 0 W/13182618-13182618 FN1552-S SNP G -> A AC=2;AN=188;BQB=0.391127;DP=1314;DP4=265,1014,5,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.13711e-07;MQSB=0.31368;RPB=0.923899;SGB=46.6141;VDB=0.940149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P103S|472|LOC_Os04g23180|protein_coding|CODING|LOC_Os04g23180.1|1|1) FN2333.SNP.4:13188442 chr04:013188442 0 W/13188442-13188442 FN2333 SNP C -> A AC=1;AN=192;BQB=0.920619;DP=5017;DP4=2426,2295,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0089695;MQB=4.99802e-12;MQSB=0.00724886;RPB=0.995578;SGB=89.6809;VDB=0.965647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.4:13188443 chr04:013188443 0 W/13188443-13188443 FN2333 SNP T -> A AC=1;AN=192;BQB=0.533528;DP=5024;DP4=2458,2285,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0093551;MQB=2.83365e-12;MQSB=0.0314797;RPB=0.985164;SGB=57.1218;VDB=0.959132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.4:13190127 chr04:013190127 0 W/13190127-13190127 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.668486;DP=3092;DP4=1804,1229,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00562e-07;MQSB=0.969058;RPB=0.925188;SGB=-64.9298;VDB=0.653429;EFF=INTRON(MODIFIER||||655|LOC_Os04g23190|protein_coding|CODING|LOC_Os04g23190.1|1|1) FN3732-S.SNP.4:13193701 chr04:013193701 0 W/13193701-13193701 FN3732-S SNP G -> T AC=1;AN=190;BQB=0.914214;DP=2492;DP4=1081,1292,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.77867e-07;MQSB=0.804645;RPB=0.608588;SGB=39.6545;VDB=0.701899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P511T|770|LOC_Os04g23200|protein_coding|CODING|LOC_Os04g23200.1|1|1) FN831-S.SNP.4:13194626 chr04:013194626 0 W/13194626-13194626 FN831-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN343-S.SNP.4:13194631 chr04:013194631 0 W/13194631-13194631 FN343-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2386.SNP.4:13195371 chr04:013195371 0 W/13195371-13195371 FN2386 SNP G -> A AC=1;AN=192;BQB=0.573466;DP=4564;DP4=2053,2150,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.22498e-10;MQSB=0.113689;RPB=0.6296;SGB=57.6018;VDB=0.830584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.4:13196924 chr04:013196924 0 W/13196924-13196924 FN2550-S SNP T -> C AC=1;AN=198;BQB=0.0518686;DP=4562;DP4=2196,2213,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.97194e-05;MQSB=0.998186;RPB=0.946995;SGB=-3.4115;VDB=0.941895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.4:13203050 chr04:013203050 0 W/13203050-13203050 FN2098-S SNP A -> G AC=1;AN=168;BQB=0.000217205;DP=3085;DP4=1108,1913,24,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.03495e-16;MQSB=0.8327;RPB=0.985482;SGB=-654.685;VDB=0.428899;EFF=INTRON(MODIFIER||||1007|LOC_Os04g23210|protein_coding|CODING|LOC_Os04g23210.1|1|1) FN4016-S.SNP.4:13203317 chr04:013203317 0 W/13203317-13203317 FN4016-S SNP T -> C AC=2;AN=168;BQB=0.33918;DP=1957;DP4=1226,609,17,5;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=5.60696e-09;MQSB=0.000862306;RPB=0.87851;SGB=39.2004;VDB=0.958548;EFF=INTRON(MODIFIER||||1007|LOC_Os04g23210|protein_coding|CODING|LOC_Os04g23210.1|1|1) FN1049-S.SNP.4:13203909 chr04:013203909 0 W/13203909-13203909 FN1049-S Single Base Substitution A-G INTRON HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN-88.SNP.4:13211517 chr04:013211517 0 W/13211517-13211517 FN-88 Single Base Substitution A-C INTRON HOMO SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN760-S.SNP.4:13215787 chr04:013215787 0 W/13215787-13215787 FN760-S Single Base Substitution G-A INTRON HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2254-S.SNP.4:13220369 chr04:013220369 0 W/13220369-13220369 FN2254-S SNP A -> T AC=1;AN=190;BQB=0.019037;DP=3454;DP4=1442,1395,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.6264e-05;MQSB=0.026945;RPB=0.0638507;SGB=-34.54;VDB=0.344327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V1036E|1064|LOC_Os04g23220|protein_coding|CODING|LOC_Os04g23220.1|3|1) FN1053-S.SNP.4:13220792 chr04:013220792 0 W/13220792-13220792 FN1053-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g23220 expressed protein SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN4089-S.SNP.4:13224447 chr04:013224447 0 W/13224447-13224447 FN4089-S SNP G -> A AC=1;AN=182;BQB=0.940033;DP=2566;DP4=1308,1181,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.56338e-05;MQSB=0.999998;RPB=0.793298;SGB=30.5793;VDB=0.538025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A173V|1064|LOC_Os04g23220|protein_coding|CODING|LOC_Os04g23220.1|1|1) FN3699-S.SNP.4:13225721 chr04:013225721 0 W/13225721-13225721 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.999753;DP=3402;DP4=1611,1651,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65477e-14;MQSB=0.895398;RPB=0.350514;SGB=94.6341;VDB=0.145589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.4:13225722 chr04:013225722 0 W/13225722-13225722 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.950572;DP=3397;DP4=1607,1659,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63747e-14;MQSB=0.910439;RPB=0.426171;SGB=94.6341;VDB=0.0699318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.4:13227239 chr04:013227239 0 W/13227239-13227239 FN2109-S SNP T -> A AC=2;AN=168;BQB=0.910679;DP=2972;DP4=999,1913,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.58481e-18;MQSB=0.227187;RPB=0.256329;SGB=-94.7442;VDB=0.912445;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.4:13230937 chr04:013230937 0 W/13230937-13230937 FN367-S Single Base Substitution G-A INTERGENIC HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN4137-S.SNP.4:13231579 chr04:013231579 0 W/13231579-13231579 FN4137-S SNP C -> T AC=1;AN=170;BQB=0.9676;DP=2310;DP4=1158,1052,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.71082e-05;MQSB=0.940149;RPB=0.879872;SGB=25.6601;VDB=0.941126;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.4:13241215 chr04:013241215 0 W/13241215-13241215 FN1369-S Single Base Substitution C-T INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3380-S.SNP.4:13243604 chr04:013243604 0 W/13243604-13243604 FN3380-S SNP G -> T AC=2;AN=184;BQB=0.558007;DP=2898;DP4=1504,1293,15,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000345066;MQB=4.53991e-11;MQSB=0.997031;RPB=0.789239;SGB=107.526;VDB=0.00175767;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.4:13246538 chr04:013246538 0 W/13246538-13246538 FN509-S Single Base Substitution A-C INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1027-S.SNP.4:13247710 chr04:013247710 0 W/13247710-13247710 FN1027-S Single Base Substitution T-A INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN782-S.SNP.4:13248866 chr04:013248866 0 W/13248866-13248866 FN782-S Single Base Substitution T-G INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN1035-S.SNP.4:13249064 chr04:013249064 0 W/13249064-13249064 FN1035-S Single Base Substitution C-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1035-S.SNP.4:13249066 chr04:013249066 0 W/13249066-13249066 FN1035-S Single Base Substitution C-A INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2146-S.SNP.4:13258873 chr04:013258873 0 W/13258873-13258873 FN2146-S SNP A -> T AC=1;AN=168;BQB=0.233016;DP=4095;DP4=2028,2030,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00976801;MQB=3.21899e-06;MQSB=0.0223566;RPB=0.882815;SGB=11.3448;VDB=0.673648;EFF=INTRON(MODIFIER||||835|LOC_Os04g23240|protein_coding|CODING|LOC_Os04g23240.1|2|1) FN2753-S.SNP.4:13261573 chr04:013261573 0 W/13261573-13261573 FN2753-S SNP G -> A AC=2;AN=200;BQB=0.924549;DP=4267;DP4=1929,2113,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000234357;MQB=8.13942e-17;MQSB=0.735603;RPB=0.852554;SGB=137.158;VDB=0.0393944;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R543|835|LOC_Os04g23240|protein_coding|CODING|LOC_Os04g23240.1|6|1) FN939-S.SNP.4:13262006 chr04:013262006 0 W/13262006-13262006 FN939-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g23240 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2333.SNP.4:13266929 chr04:013266929 0 W/13266929-13266929 FN2333 SNP C -> A AC=1;AN=192;BQB=0.907992;DP=4769;DP4=2194,2265,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15393e-06;MQSB=0.997809;RPB=0.954856;SGB=26.3496;VDB=0.903988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P639Q|890|LOC_Os04g23250|protein_coding|CODING|LOC_Os04g23250.1|6|1) FN620-S.SNP.4:13272462 chr04:013272462 0 W/13272462-13272462 FN620-S Single Base Substitution T-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3827-S.SNP.4:13276712 chr04:013276712 0 W/13276712-13276712 FN3827-S SNP T -> C AC=2;AN=190;BQB=0.896609;DP=2843;DP4=1391,1289,16,23;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00281393;MQB=5.37718e-12;MQSB=0.988963;RPB=0.84489;SGB=172.05;VDB=0.261049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R538G|671|LOC_Os04g23270|protein_coding|CODING|LOC_Os04g23270.1|5|1) FN509-S.SNP.4:13279728 chr04:013279728 0 W/13279728-13279728 FN509-S Single Base Substitution A-T INTRON HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN620-S.SNP.4:13281011 chr04:013281011 0 W/13281011-13281011 FN620-S Single Base Substitution T-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN-325.SNP.4:13282958 chr04:013282958 0 W/13282958-13282958 FN-325 Single Base Substitution A-G INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN3879-S.SNP.4:13288479 chr04:013288479 0 W/13288479-13288479 FN3879-S SNP C -> G AC=1;AN=158;BQB=0.404916;DP=1517;DP4=717,542,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.0103723;MQSB=0.858488;RPB=0.561461;SGB=-37.2706;VDB=0.962297;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.4:13291944 chr04:013291944 0 W/13291944-13291944 FN3827-S SNP G -> A AC=2;AN=190;BQB=0.968933;DP=2537;DP4=1321,1141,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000394166;MQB=1.83154e-13;MQSB=0.184609;RPB=0.849409;SGB=108.296;VDB=0.711575;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H104|767|LOC_Os04g23280|protein_coding|CODING|LOC_Os04g23280.1|1|1) FN2149-S.SNP.4:13293994 chr04:013293994 0 W/13293994-13293994 FN2149-S SNP A -> G AC=1;AN=168;BQB=0.0449258;DP=3248;DP4=1705,1465,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.46598e-08;MQSB=0.856044;RPB=0.524643;SGB=-205.613;VDB=0.232036;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y202H|413|LOC_Os04g23290|protein_coding|CODING|LOC_Os04g23290.1|2|1) FN2177-S.SNP.4:13294847 chr04:013294847 0 W/13294847-13294847 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.192994;DP=3852;DP4=2219,1571,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00752856;MQB=0.648029;MQSB=0.494794;RPB=0.987207;SGB=-119.349;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.4:13295575 chr04:013295575 0 W/13295575-13295575 FN4156-S SNP C -> T AC=1;AN=170;BQB=0.999991;DP=1871;DP4=822,985,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.3692e-05;MQSB=0.867177;RPB=0.20658;SGB=24.5502;VDB=0.929401;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.4:13295715 chr04:013295715 0 W/13295715-13295715 FN-146 Single Base Substitution T-C INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2281.SNP.4:13296472 chr04:013296472 0 W/13296472-13296472 FN2281 SNP G -> A AC=1;AN=192;BQB=0.944321;DP=6573;DP4=3117,2916,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.127796;MQB=0.593132;MQSB=0;RPB=0.483819;SGB=-10.2539;VDB=0.401172;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.4:13303416 chr04:013303416 0 W/13303416-13303416 FN923-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN865-S.SNP.4:13306689 chr04:013306689 0 W/13306689-13306689 FN865-S Single Base Substitution G-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN453-S.SNP.4:13312923 chr04:013312923 0 W/13312923-13312923 FN453-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. W42-1-3S-1.SNP.4:13317262 chr04:013317262 0 W/13317262-13317262 W42-1-3S-1 Single Base Substitution T-A INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1286-S.SNP.4:13323661 chr04:013323661 0 W/13323661-13323661 FN1286-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3768-S.SNP.4:13323934 chr04:013323934 0 W/13323934-13323934 FN3768-S SNP G -> A AC=1;AN=190;BQB=0.900006;DP=2556;DP4=1137,1300,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43342e-06;MQSB=0.706101;RPB=0.875596;SGB=58.2031;VDB=0.278838;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.4:13330457 chr04:013330457 0 W/13330457-13330457 FN2500 SNP G -> A AC=1;AN=200;BQB=0.391767;DP=5053;DP4=2406,2403,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.19214e-15;MQSB=0.982383;RPB=0.998595;SGB=-5.84819;VDB=0.664543;EFF=INTRON(MODIFIER||||1028|LOC_Os04g23340|protein_coding|CODING|LOC_Os04g23340.1|11|1) FN2767-S.SNP.4:13331636 chr04:013331636 0 W/13331636-13331636 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.585638;DP=4049;DP4=1823,2007,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000493949;MQB=3.01162e-12;MQSB=0.909899;RPB=0.535378;SGB=50.1053;VDB=0.10459;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.4:13334079 chr04:013334079 0 W/13334079-13334079 FN_N1-26-1 Single Base Substitution G-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1114-S.SNP.4:13334128 chr04:013334128 0 W/13334128-13334128 FN1114-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g23350 retrotransposon protein, putative, unclassified, expressed SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3757-S.SNP.4:13336739 chr04:013336739 0 W/13336739-13336739 FN3757-S SNP A -> T AC=1;AN=190;BQB=0.947496;DP=2608;DP4=1235,1309,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.7814e-10;MQSB=0.692742;RPB=0.120913;SGB=67.3108;VDB=0.373869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S140R|1071|LOC_Os04g23350|protein_coding|CODING|LOC_Os04g23350.1|1|1) W466-5-1.SNP.4:13341492 chr04:013341492 0 W/13341492-13341492 W466-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1287-S.SNP.4:13341946 chr04:013341946 0 W/13341946-13341946 FN1287-S Single Base Substitution T-C INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN-400.SNP.4:13343978 chr04:013343978 0 W/13343978-13343978 FN-400 Single Base Substitution T-A INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.4:13343978 chr04:013343978 0 W/13343978-13343978 FN400-S Single Base Substitution T-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN2281.SNP.4:13346146 chr04:013346146 0 W/13346146-13346146 FN2281 SNP T -> A AC=1;AN=192;BQB=0.746658;DP=5117;DP4=2290,2393,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.5212e-13;MQSB=0.902399;RPB=0.792079;SGB=-8.56084;VDB=0.580849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E1486V|1618|LOC_Os04g23360|protein_coding|CODING|LOC_Os04g23360.1|9|1) FN3802-S.SNP.4:13346783 chr04:013346783 0 W/13346783-13346783 FN3802-S SNP C -> A AC=2;AN=190;BQB=0.850774;DP=2634;DP4=1294,1242,9,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.29321e-15;MQSB=0.851232;RPB=0.0641911;SGB=103.742;VDB=0.366085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D1397Y|1618|LOC_Os04g23360|protein_coding|CODING|LOC_Os04g23360.1|7|1) FN1099-S.SNP.4:13350420 chr04:013350420 0 W/13350420-13350420 FN1099-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g23360 retrotransposon protein, putative, unclassified, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1022-S.SNP.4:13350602 chr04:013350602 0 W/13350602-13350602 FN1022-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g23360 retrotransposon protein, putative, unclassified, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1349-S.SNP.4:13369579 chr04:013369579 0 W/13369579-13369579 FN1349-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g23380 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN3343-S.SNP.4:13371938 chr04:013371938 0 W/13371938-13371938 FN3343-S SNP C -> A AC=1;AN=184;BQB=0.892589;DP=3509;DP4=1711,1643,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22898e-08;MQSB=0.863056;RPB=0.917729;SGB=15.7097;VDB=0.0335384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.4:13374919 chr04:013374919 0 W/13374919-13374919 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.919715;DP=4605;DP4=2296,2050,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8233e-11;MQSB=0.99985;RPB=0.906252;SGB=61.9006;VDB=0.705334;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.4:13382316 chr04:013382316 0 W/13382316-13382316 FN2433 SNP G -> A AC=1;AN=200;BQB=0.497833;DP=4513;DP4=2206,2059,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00083e-08;MQSB=0.84547;RPB=0.00296358;SGB=-14.9257;VDB=0.0965088;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T234I|716|LOC_Os04g23400|protein_coding|CODING|LOC_Os04g23400.1|1|1) FN4325-S.SNP.4:13385039 chr04:013385039 0 W/13385039-13385039 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.148523;DP=2789;DP4=1288,1432,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00631634;MQSB=0.990093;RPB=0.971294;SGB=10.1134;VDB=0.823921;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A169V|507|LOC_Os04g23410|protein_coding|CODING|LOC_Os04g23410.1|2|1) FN817-S.SNP.4:13385447 chr04:013385447 0 W/13385447-13385447 FN817-S Single Base Substitution G-A INTRON HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN-67.SNP.4:13396748 chr04:013396748 0 W/13396748-13396748 FN-67 Single Base Substitution C-T INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN770-S.SNP.4:13402170 chr04:013402170 0 W/13402170-13402170 FN770-S Single Base Substitution G-C INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN-19.SNP.4:13404903 chr04:013404903 0 W/13404903-13404903 FN-19 Single Base Substitution T-G INTERGENIC Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN3764-S.SNP.4:13411567 chr04:013411567 0 W/13411567-13411567 FN3764-S SNP T -> A AC=2;AN=190;BQB=0.953334;DP=2758;DP4=1275,1332,10,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.62805e-11;MQSB=0.498684;RPB=0.880846;SGB=112.85;VDB=0.764421;EFF=INTRON(MODIFIER||||111|LOC_Os04g23460|protein_coding|CODING|LOC_Os04g23460.1|1|1) FN2455.SNP.4:13417958 chr04:013417958 0 W/13417958-13417958 FN2455 SNP G -> A AC=1;AN=200;BQB=0.699381;DP=4512;DP4=2255,2005,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221631;MQB=4.12341e-05;MQSB=0.478558;RPB=0.999702;SGB=31.2392;VDB=0.5;EFF=INTRON(MODIFIER||||1611|LOC_Os04g23470|protein_coding|CODING|LOC_Os04g23470.1|4|1) FN2184-S.SNP.4:13420848 chr04:013420848 0 W/13420848-13420848 FN2184-S SNP A -> G AC=1;AN=190;BQB=0.676778;DP=4953;DP4=2493,2088,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.376338;MQB=0.0518493;MQSB=0;RPB=0.920061;SGB=53.8699;VDB=0.992381;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H114|1611|LOC_Os04g23470|protein_coding|CODING|LOC_Os04g23470.1|2|1) FN-215.SNP.4:13423716 chr04:013423716 0 W/13423716-13423716 FN-215 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1702-S.SNP.4:13423776 chr04:013423776 0 W/13423776-13423776 FN1702-S SNP C -> A AC=1;AN=188;BQB=0.96051;DP=1833;DP4=1077,720,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.18229e-05;MQSB=0.99989;RPB=0.377604;SGB=21.8113;VDB=0.468633;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S403|432|LOC_Os04g23480|protein_coding|CODING|LOC_Os04g23480.1|3|1) FN858-S.SNP.4:13434260 chr04:013434260 0 W/13434260-13434260 FN858-S Single Base Substitution G-A INTRON HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3486-S.SNP.4:13434609 chr04:013434609 0 W/13434609-13434609 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.882576;DP=2564;DP4=1324,1162,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.33132e-11;MQSB=0.896401;RPB=0.844048;SGB=89.4385;VDB=0.886052;EFF=UTR_3_PRIME(MODIFIER||28||159|LOC_Os04g23500|protein_coding|CODING|LOC_Os04g23500.1|4|1) FN-94.SNP.4:13435680 chr04:013435680 0 W/13435680-13435680 FN-94 Single Base Substitution C-G INTRON HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1231-S.SNP.4:13436441 chr04:013436441 0 W/13436441-13436441 FN1231-S Single Base Substitution A-C INTRON HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN845-S.SNP.4:13436805 chr04:013436805 0 W/13436805-13436805 FN845-S Single Base Substitution C-T INTRON HOMO SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2487.SNP.4:13438843 chr04:013438843 0 W/13438843-13438843 FN2487 SNP G -> C AC=1;AN=200;BQB=0.409228;DP=2996;DP4=1428,1358,7,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000333778;MQB=0.000114577;MQSB=3.76351e-07;RPB=0.0955632;SGB=26.8797;VDB=0.232213;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.4:13439318 chr04:013439318 0 W/13439318-13439318 FN2283 SNP C -> T AC=1;AN=192;BQB=0.938161;DP=3635;DP4=1855,1214,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000275103;MQB=8.10484e-05;MQSB=3.81106e-35;RPB=0.991131;SGB=50.4731;VDB=0.858675;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A99V|119|LOC_Os04g23510|protein_coding|CODING|LOC_Os04g23510.1|1|1) FN1456-S.SNP.4:13442274 chr04:013442274 0 W/13442274-13442274 FN1456-S Single Base Substitution T-A INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3710-S.SNP.4:13446669 chr04:013446669 0 W/13446669-13446669 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.968916;DP=3024;DP4=1478,1440,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.08245e-11;MQSB=0.96686;RPB=0.853075;SGB=50.3161;VDB=0.554656;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.4:13449686 chr04:013449686 0 W/13449686-13449686 FN-101 Single Base Substitution G-C INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1382-S.SNP.4:13449686 chr04:013449686 0 W/13449686-13449686 FN1382-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3508-S.SNP.4:13449686 chr04:013449686 0 W/13449686-13449686 FN3508-S SNP G -> C AC=1;AN=188;BQB=0.76759;DP=2447;DP4=1062,1325,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.81519e-06;MQSB=0.14372;RPB=0.0377107;SGB=25.3545;VDB=0.0436922;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.4:13449686 chr04:013449686 0 W/13449686-13449686 W607-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN818-S.SNP.4:13457315 chr04:013457315 0 W/13457315-13457315 FN818-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g23530 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN2698-S.SNP.4:13459865 chr04:013459865 0 W/13459865-13459865 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.318164;DP=5099;DP4=2178,2703,12,7;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0568739;MQB=0.218557;MQSB=3.46366e-17;RPB=0.968165;SGB=81.8956;VDB=0.485586;EFF=INTRON(MODIFIER||||909|LOC_Os04g23530|protein_coding|CODING|LOC_Os04g23530.1|5|1) FN2539-S.SNP.4:13461263 chr04:013461263 0 W/13461263-13461263 FN2539-S SNP G -> A AC=2;AN=198;BQB=0.987107;DP=2256;DP4=1654,457,15,2;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.52237e-09;MQSB=0.916366;RPB=0.65648;SGB=50.9344;VDB=0.868756;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.4:13464637 chr04:013464637 0 W/13464637-13464637 FN912-S Single Base Substitution T-G INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2651-S.SNP.4:13465895 chr04:013465895 0 W/13465895-13465895 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.903751;DP=4820;DP4=2386,2048,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207469;MQB=5.62419e-13;MQSB=0.951265;RPB=0.347597;SGB=95.7111;VDB=0.490153;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.4:13465896 chr04:013465896 0 W/13465896-13465896 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.985821;DP=4804;DP4=2381,2067,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020816;MQB=1.452e-13;MQSB=0.931134;RPB=0.290139;SGB=45.1159;VDB=0.507754;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.4:13468535 chr04:013468535 0 W/13468535-13468535 FN4138-S SNP C -> A AC=1;AN=170;BQB=0.924985;DP=1566;DP4=900,573,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000417929;MQSB=0.55814;RPB=0.133905;SGB=38.987;VDB=0.117011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A64S|310|LOC_Os04g23550|protein_coding|CODING|LOC_Os04g23550.1|2|1),UTR_5_PRIME(MODIFIER||258||189|LOC_Os04g23550|protein_coding|CODING|LOC_Os04g23550.2|2|1) FN-190.SNP.4:13471933 chr04:013471933 0 W/13471933-13471933 FN-190 Single Base Substitution G-C INTERGENIC HOMO SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3576-S.SNP.4:13473233 chr04:013473233 0 W/13473233-13473233 FN3576-S SNP A -> C AC=1;AN=188;BQB=0.831881;DP=1533;DP4=791,662,1,12;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0061703;MQSB=0.680202;RPB=0.228778;SGB=35.9843;VDB=0.406435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.4:13480539 chr04:013480539 0 W/13480539-13480539 FN2378 SNP C -> A AC=1;AN=192;BQB=0.871135;DP=5332;DP4=2579,2333,17,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000562641;MQB=3.03656e-16;MQSB=0.0212394;RPB=0.963761;SGB=72.5078;VDB=0.282298;EFF=INTRON(MODIFIER||||1721|LOC_Os04g23570|protein_coding|CODING|LOC_Os04g23570.1|4|1) FN2281.SNP.4:13482998 chr04:013482998 0 W/13482998-13482998 FN2281 SNP G -> A AC=1;AN=192;BQB=0.682632;DP=4699;DP4=2286,2135,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44234e-13;MQSB=0.625069;RPB=0.110841;SGB=108.547;VDB=0.22836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T375M|1721|LOC_Os04g23570|protein_coding|CODING|LOC_Os04g23570.1|2|1) FN2094-S.SNP.4:13483964 chr04:013483964 0 W/13483964-13483964 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.038897;DP=3192;DP4=1707,1440,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00908521;MQB=6.85693e-09;MQSB=2.53069e-05;RPB=0.99413;SGB=-168.619;VDB=0.211124;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D100N|1721|LOC_Os04g23570|protein_coding|CODING|LOC_Os04g23570.1|1|1) FN2573-S.SNP.4:13485835 chr04:013485835 0 W/13485835-13485835 FN2573-S SNP G -> T AC=1;AN=198;BQB=0.859297;DP=4337;DP4=2123,2023,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.32102e-11;MQSB=0.904627;RPB=0.994122;SGB=7.75428;VDB=0.930786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.4:13485991 chr04:013485991 0 W/13485991-13485991 FN2282 SNP G -> A AC=1;AN=192;BQB=0.611342;DP=3936;DP4=2481,1226,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.45014e-09;MQSB=0.848407;RPB=0.916839;SGB=-36.6348;VDB=0.879985;EFF=INTERGENIC(MODIFIER||||||||||1) FN900-S.SNP.4:13486002 chr04:013486002 0 W/13486002-13486002 FN900-S Single Base Substitution G-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN3415-S.SNP.4:13488003 chr04:013488003 0 W/13488003-13488003 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.921618;DP=2567;DP4=1301,1168,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000238668;MQSB=0.927558;RPB=0.682428;SGB=30.6558;VDB=0.748002;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.4:13491223 chr04:013491223 0 W/13491223-13491223 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.543502;DP=4129;DP4=1967,1929,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.81525e-14;MQSB=0.842593;RPB=0.20391;SGB=68.91;VDB=0.261871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.4:13494850 chr04:013494850 0 W/13494850-13494850 FN2252-S SNP T -> A AC=1;AN=190;BQB=0.748849;DP=4957;DP4=2199,2511,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.93855e-07;MQSB=0.964804;RPB=0.720895;SGB=18.552;VDB=0.125773;EFF=INTRON(MODIFIER||||401|LOC_Os04g23580|protein_coding|CODING|LOC_Os04g23580.1|3|1) FN320-S.SNP.4:13498450 chr04:013498450 0 W/13498450-13498450 FN320-S Single Base Substitution G-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3491-S.SNP.4:13515874 chr04:013515874 0 W/13515874-13515874 FN3491-S SNP T -> A AC=2;AN=188;BQB=0.89654;DP=2917;DP4=1404,1406,16,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48688e-12;MQSB=0.680827;RPB=0.631676;SGB=74.9605;VDB=0.128356;EFF=INTERGENIC(MODIFIER||||||||||1) FN_776-5-1.SNP.4:13526502 chr04:013526502 0 W/13526502-13526502 FN_776-5-1 Single Base Substitution G-A HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3695-S.SNP.4:13529240 chr04:013529240 0 W/13529240-13529240 FN3695-S SNP A -> T AC=1;AN=190;BQB=0.863256;DP=2795;DP4=1372,1299,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.19764e-08;MQSB=0.95527;RPB=0.948291;SGB=49.0954;VDB=0.399491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T66S|145|LOC_Os04g23630|protein_coding|CODING|LOC_Os04g23630.1|3|1) FN3808-S.SNP.4:13530947 chr04:013530947 0 W/13530947-13530947 FN3808-S SNP G -> T AC=2;AN=190;BQB=0.712905;DP=2682;DP4=1319,1278,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.24412e-13;MQSB=0.997219;RPB=0.970313;SGB=75.1932;VDB=0.437074;EFF=UTR_3_PRIME(MODIFIER||1379||145|LOC_Os04g23630|protein_coding|CODING|LOC_Os04g23630.1|4|1) FN3808-S.SNP.4:13530948 chr04:013530948 0 W/13530948-13530948 FN3808-S SNP C -> T AC=2;AN=190;BQB=0.992804;DP=2670;DP4=1324,1263,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.91138e-15;MQSB=0.997886;RPB=0.926824;SGB=108.296;VDB=0.388302;EFF=UTR_3_PRIME(MODIFIER||1380||145|LOC_Os04g23630|protein_coding|CODING|LOC_Os04g23630.1|4|1) FN1471-S.SNP.4:13531862 chr04:013531862 0 W/13531862-13531862 FN1471-S SNP G -> A AC=2;AN=188;BQB=0.969177;DP=2800;DP4=1124,1610,16,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.64994e-12;MQSB=0.436585;RPB=0.858343;SGB=99.7635;VDB=0.770349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.4:13532525 chr04:013532525 0 W/13532525-13532525 FN2221-S SNP A -> C AC=1;AN=190;BQB=0.896642;DP=5157;DP4=2446,2443,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.18761e-10;MQSB=0.408513;RPB=0.959526;SGB=57.4238;VDB=0.309556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.4:13532525 chr04:013532525 0 W/13532525-13532525 FN2344 SNP A -> C AC=2;AN=192;BQB=0.987846;DP=5328;DP4=2608,2431,26,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.02095e-28;MQSB=0.163772;RPB=0.737071;SGB=118.666;VDB=0.112817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.4:13532525 chr04:013532525 0 W/13532525-13532525 FN2429 SNP A -> C AC=1;AN=200;BQB=0.47703;DP=4720;DP4=2109,2369,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000211864;MQB=8.71564e-11;MQSB=0.477645;RPB=0.826401;SGB=77.2904;VDB=0.576629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.4:13532525 chr04:013532525 0 W/13532525-13532525 FN2581-S SNP A -> C AC=2;AN=198;BQB=0.534135;DP=4454;DP4=2193,2042,16,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.95934e-15;MQSB=0.270453;RPB=0.999981;SGB=83.2905;VDB=0.75851;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.4:13532708 chr04:013532708 0 W/13532708-13532708 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.627348;DP=1828;DP4=838,929,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.36435e-06;MQSB=0.37409;RPB=0.877694;SGB=23.9652;VDB=0.857441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.4:13545714 chr04:013545714 0 W/13545714-13545714 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.999474;DP=6233;DP4=3683,2268,12,10;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.359378;MQB=0.114864;MQSB=0;RPB=0.0353279;SGB=69.1109;VDB=0.363669;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S299|789|LOC_Os04g23680|protein_coding|CODING|LOC_Os04g23680.1|3|1) FN3460-S.SNP.4:13545714 chr04:013545714 0 W/13545714-13545714 FN3460-S SNP C -> T AC=1;AN=184;BQB=0.879578;DP=4316;DP4=2408,1784,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.444393;MQB=0.0863267;MQSB=0;RPB=0.971074;SGB=28.3187;VDB=0.5602;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S299|789|LOC_Os04g23680|protein_coding|CODING|LOC_Os04g23680.1|3|1) FN2706-S.SNP.4:13549244 chr04:013549244 0 W/13549244-13549244 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.510285;DP=5126;DP4=2497,2404,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.58289e-10;MQSB=0.976195;RPB=0.978567;SGB=43.8747;VDB=0.924422;EFF=INTERGENIC(MODIFIER||||||||||1) FN-69.SNP.4:13550754 chr04:013550754 0 W/13550754-13550754 FN-69 Single Base Substitution C-T INTRON HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1150-S.SNP.4:13553365 chr04:013553365 0 W/13553365-13553365 FN1150-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g23700 lectin protein kinase family protein, putative, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2715-S.SNP.4:13556012 chr04:013556012 0 W/13556012-13556012 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.951105;DP=4655;DP4=1946,2248,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.6532e-11;MQSB=0.850999;RPB=0.623255;SGB=81.8956;VDB=0.112784;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN-127 Single Base Substitution G-A INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-99.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN-99 Single Base Substitution G-A INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1152-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN1152-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1662-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN1662-S Single Base Substitution G-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN1681-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN1681-S SNP G -> A AC=2;AN=188;BQB=0.287532;DP=3191;DP4=1549,1570,18,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000940144;MQB=4.9802e-20;MQSB=0.86686;RPB=0.994988;SGB=-242.477;VDB=0.363528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN2226-S SNP G -> A AC=2;AN=190;BQB=0.454284;DP=5019;DP4=2453,2150,27,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000199243;MQB=1.31373e-22;MQSB=0.920598;RPB=0.937911;SGB=61.6046;VDB=0.639512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN2340 SNP G -> A AC=1;AN=192;BQB=0.0515269;DP=5037;DP4=2421,2228,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.94049e-08;MQSB=0.959899;RPB=0.839353;SGB=-12.5113;VDB=0.296815;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN2703-S SNP G -> A AC=1;AN=200;BQB=0.660081;DP=5028;DP4=2440,2306,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.79778e-13;MQSB=0.99968;RPB=0.777011;SGB=86.5007;VDB=0.498138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN3308-S SNP G -> A AC=2;AN=184;BQB=0.497932;DP=2979;DP4=1421,1420,15,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.22251e-16;MQSB=0.994945;RPB=0.891144;SGB=109.705;VDB=0.634992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.851092;DP=2681;DP4=1221,1353,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59168e-07;MQSB=0.967488;RPB=0.841078;SGB=36.1006;VDB=0.671308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN3976-S SNP G -> A AC=2;AN=168;BQB=0.98426;DP=2542;DP4=1231,1183,9,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.16892e-13;MQSB=0.996898;RPB=0.228906;SGB=17.068;VDB=0.652805;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN440-S Single Base Substitution G-A INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN850-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN850-S Single Base Substitution G-A INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN936-S.SNP.4:13564858 chr04:013564858 0 W/13564858-13564858 FN936-S Single Base Substitution G-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1582-S.SNP.4:13565278 chr04:013565278 0 W/13565278-13565278 FN1582-S Single Base Substitution C-T INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN975-S.SNP.4:13566262 chr04:013566262 0 W/13566262-13566262 FN975-S Single Base Substitution A-T INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN778-S.SNP.4:13573227 chr04:013573227 0 W/13573227-13573227 FN778-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g23739 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3323-S.SNP.4:13576601 chr04:013576601 0 W/13576601-13576601 FN3323-S SNP A -> C AC=1;AN=184;BQB=0.999998;DP=3149;DP4=1430,1548,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58453e-06;MQSB=0.510707;RPB=0.709916;SGB=32.2261;VDB=0.792905;EFF=INTRON(MODIFIER||||1805|LOC_Os04g23739|protein_coding|CODING|LOC_Os04g23739.1|7|1) FN-141.SNP.4:13578648 chr04:013578648 0 W/13578648-13578648 FN-141 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g23739 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3732-S.SNP.4:13580507 chr04:013580507 0 W/13580507-13580507 FN3732-S SNP A -> G AC=1;AN=190;BQB=0.881704;DP=2860;DP4=1427,1310,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0437063;MQB=0.34613;MQSB=1.13446e-05;RPB=0.359404;SGB=23.6597;VDB=0.843827;EFF=INTRON(MODIFIER||||1805|LOC_Os04g23739|protein_coding|CODING|LOC_Os04g23739.1|3|1) FN2563-S.SNP.4:13581606 chr04:013581606 0 W/13581606-13581606 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.440252;DP=4429;DP4=2162,1885,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00767668;MQB=0.000456043;MQSB=0.585717;RPB=0.845436;SGB=8.58354;VDB=0.675141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R85Q|1805|LOC_Os04g23739|protein_coding|CODING|LOC_Os04g23739.1|2|1) FN3824-S.SNP.4:13582309 chr04:013582309 0 W/13582309-13582309 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.989933;DP=2225;DP4=961,1173,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19385e-07;MQSB=0.450519;RPB=0.790382;SGB=53.6492;VDB=0.282505;EFF=INTRON(MODIFIER||||1805|LOC_Os04g23739|protein_coding|CODING|LOC_Os04g23739.1|1|1) FN427-S.SNP.4:13582699 chr04:013582699 0 W/13582699-13582699 FN427-S Single Base Substitution G-A INTRON HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2109-S.SNP.4:13584540 chr04:013584540 0 W/13584540-13584540 FN2109-S SNP G -> T AC=2;AN=166;BQB=0.286606;DP=3705;DP4=1928,1698,22,26;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=1.78461e-21;MQSB=0.827714;RPB=0.521576;SGB=-159.723;VDB=0.857498;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.4:13593744 chr04:013593744 0 W/13593744-13593744 FN764-S Single Base Substitution C-A INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2653-S.SNP.4:13595416 chr04:013595416 0 W/13595416-13595416 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.96666;DP=4799;DP4=2202,2345,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.72434e-12;MQSB=0.99931;RPB=0.982884;SGB=79.9264;VDB=0.829791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.4:13595589 chr04:013595589 0 W/13595589-13595589 FN2500 SNP G -> A AC=1;AN=200;BQB=0.999887;DP=4402;DP4=2061,2094,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92535e-12;MQSB=0.920093;RPB=0.067082;SGB=95.7111;VDB=0.550445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.4:13597008 chr04:013597008 0 W/13597008-13597008 FN3868-S SNP G -> A AC=2;AN=158;BQB=0.644452;DP=2482;DP4=1093,1293,12,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.58178e-09;MQSB=0.680814;RPB=0.857764;SGB=67.7679;VDB=0.898744;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K335|798|LOC_Os04g23780|protein_coding|CODING|LOC_Os04g23780.1|2|1) FN2357.SNP.4:13597933 chr04:013597933 0 W/13597933-13597933 FN2357 SNP T -> C AC=1;AN=192;BQB=0.390447;DP=4622;DP4=2281,2058,14,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.62016e-17;MQSB=0.665537;RPB=0.99566;SGB=-43.6052;VDB=0.162963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L566S|798|LOC_Os04g23780|protein_coding|CODING|LOC_Os04g23780.1|5|1) FN1254-S.SNP.4:13602289 chr04:013602289 0 W/13602289-13602289 FN1254-S Single Base Substitution C-T INTRON HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN890-S.SNP.4:13602641 chr04:013602641 0 W/13602641-13602641 FN890-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1102-S.SNP.4:13616501 chr04:013616501 0 W/13616501-13616501 FN1102-S Single Base Substitution A-T INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. W42-1-3S-1.SNP.4:13618613 chr04:013618613 0 W/13618613-13618613 W42-1-3S-1 Single Base Substitution G-C INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN4025-S.SNP.4:13618823 chr04:013618823 0 W/13618823-13618823 FN4025-S SNP A -> G AC=1;AN=168;BQB=0.912574;DP=2419;DP4=1156,1163,7,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000253897;MQSB=0.984799;RPB=0.918553;SGB=30.0193;VDB=0.371402;EFF=UTR_3_PRIME(MODIFIER||521||141|LOC_Os04g23849|protein_coding|CODING|LOC_Os04g23849.1|5|1) FN2622-S.SNP.4:13620205 chr04:013620205 0 W/13620205-13620205 FN2622-S SNP C -> G AC=1;AN=200;BQB=0.860521;DP=4586;DP4=2109,2272,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22439e-11;MQSB=0.909666;RPB=0.905652;SGB=37.3004;VDB=0.92645;EFF=INTRON(MODIFIER||||141|LOC_Os04g23849|protein_coding|CODING|LOC_Os04g23849.1|3|1) FN3967-S.SNP.4:13621286 chr04:013621286 0 W/13621286-13621286 FN3967-S SNP T -> C AC=1;AN=182;BQB=0.981102;DP=2806;DP4=1294,1411,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.18742e-10;MQSB=0.894606;RPB=0.524185;SGB=62.1548;VDB=0.936224;EFF=INTRON(MODIFIER||||141|LOC_Os04g23849|protein_coding|CODING|LOC_Os04g23849.1|3|1) FN-70.SNP.4:13625697 chr04:013625697 0 W/13625697-13625697 FN-70 Single Base Substitution G-T INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN-70.SNP.4:13625698 chr04:013625698 0 W/13625698-13625698 FN-70 Single Base Substitution G-T INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN185-2_3_4.SNP.4:13625755 chr04:013625755 0 W/13625755-13625755 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.0064527;DP=3139;DP4=1241,1851,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.15623e-08;MQSB=0.951874;RPB=0.777792;SGB=-37.3645;VDB=0.469619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.4:13627407 chr04:013627407 0 W/13627407-13627407 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN2541-S.SNP.4:13631609 chr04:013631609 0 W/13631609-13631609 FN2541-S SNP G -> A AC=1;AN=198;BQB=0.876371;DP=3804;DP4=1842,1762,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.0131441;MQB=0.847865;MQSB=2.22108e-24;RPB=0.272383;SGB=67.9293;VDB=0.351783;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R835|2028|LOC_Os04g23870|protein_coding|CODING|LOC_Os04g23870.1|2|1) W385-6-8-4.SNP.4:13638466 chr04:013638466 0 W/13638466-13638466 W385-6-8-4 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g23880 transposon protein, putative, unclassified, expressed SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN632-S.SNP.4:13642356 chr04:013642356 0 W/13642356-13642356 FN632-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g23890 AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1565-S.SNP.4:13643676 chr04:013643676 0 W/13643676-13643676 FN1565-S Single Base Substitution C-T INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2708-S.SNP.4:13651939 chr04:013651939 0 W/13651939-13651939 FN2708-S SNP T -> A AC=1;AN=200;BQB=0.998246;DP=5396;DP4=2686,2472,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185322;MQB=5.84349e-17;MQSB=0.688912;RPB=0.949526;SGB=-4.03268;VDB=0.804004;EFF=INTRON(MODIFIER||||907|LOC_Os04g23890|protein_coding|CODING|LOC_Os04g23890.1|6|1),INTRON(MODIFIER||||907|LOC_Os04g23890|protein_coding|CODING|LOC_Os04g23890.2|6|1),INTRON(MODIFIER||||907|LOC_Os04g23890|protein_coding|CODING|LOC_Os04g23890.3|6|1),INTRON(MODIFIER||||876|LOC_Os04g23890|protein_coding|CODING|LOC_Os04g23890.4|6|1) FN479-S.SNP.4:13659817 chr04:013659817 0 W/13659817-13659817 FN479-S Single Base Substitution T-C INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3510-S.SNP.4:13662766 chr04:013662766 0 W/13662766-13662766 FN3510-S SNP G -> C AC=1;AN=188;BQB=0.981774;DP=2755;DP4=1109,1568,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000692894;MQSB=0.67053;RPB=0.609841;SGB=21.8113;VDB=0.399478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.4:13683680 chr04:013683680 0 W/13683680-13683680 FN3797-S SNP G -> T AC=2;AN=190;BQB=0.940181;DP=2577;DP4=1228,1270,8,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.45079e-13;MQSB=0.999061;RPB=0.492626;SGB=71.6393;VDB=0.966475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.4:13684876 chr04:013684876 0 W/13684876-13684876 FN2244-S SNP T -> C AC=1;AN=190;BQB=0.591628;DP=4092;DP4=1762,1894,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9519e-05;MQSB=0.435164;RPB=0.0784955;SGB=15.9981;VDB=0.035336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.4:13684900 chr04:013684900 0 W/13684900-13684900 FN2178-S SNP C -> A AC=1;AN=168;BQB=0.0995869;DP=2709;DP4=1436,1228,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.22458e-06;MQSB=0.973686;RPB=0.937184;SGB=5.62151;VDB=0.122076;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.4:13685367 chr04:013685367 0 W/13685367-13685367 FN661-S Single Base Substitution A-G INTERGENIC HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN1916.SNP.4:13687588 chr04:013687588 0 W/13687588-13687588 FN1916 Single Base Substitution G-A HET LOC_Os04g23930 retrotransposon protein, putative, unclassified, expressed SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2201-S.SNP.4:13689396 chr04:013689396 0 W/13689396-13689396 FN2201-S SNP T -> C AC=2;AN=190;BQB=0.703545;DP=4375;DP4=1768,2091,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.16681e-16;MQSB=0.077322;RPB=0.986171;SGB=-43.9086;VDB=0.568029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.4:13692549 chr04:013692549 0 W/13692549-13692549 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.831844;DP=2526;DP4=1250,1162,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000395883;MQB=4.83818e-10;MQSB=0.799986;RPB=0.854475;SGB=64.5449;VDB=0.241298;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.4:13693924 chr04:013693924 0 W/13693924-13693924 FN_807-3-1 Single Base Substitution A-G Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN-250.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN-250 Single Base Substitution C-T INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN-375.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN-375 Single Base Substitution C-T INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-411.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN-411 Single Base Substitution C-T INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1072-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN1072-S Single Base Substitution C-T INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1153-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN1153-S Single Base Substitution C-T INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1450-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN1450-S Single Base Substitution C-T INTERGENIC Homo SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3431-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN3431-S SNP C -> T AC=2;AN=184;BQB=0.999989;DP=3615;DP4=1879,1657,3,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.94608e-10;MQSB=0.774638;RPB=0.548806;SGB=66.8296;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN3516-S SNP C -> T AC=2;AN=188;BQB=0.982492;DP=3611;DP4=1897,1639,17,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.86104e-14;MQSB=0.481367;RPB=0.927193;SGB=112.585;VDB=0.795323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.845967;DP=2597;DP4=1466,1048,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44536e-13;MQSB=0.796915;RPB=0.999317;SGB=90.0802;VDB=0.123951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN4120-S SNP C -> T AC=2;AN=182;BQB=0.998038;DP=3250;DP4=1766,1402,19,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.38992e-18;MQSB=0.984442;RPB=0.77254;SGB=143.35;VDB=0.639093;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN571-S Single Base Substitution C-T INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN731-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN731-S Single Base Substitution C-T INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN848-S.SNP.4:13696780 chr04:013696780 0 W/13696780-13696780 FN848-S Single Base Substitution C-T INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2464.SNP.4:13698141 chr04:013698141 0 W/13698141-13698141 FN2464 SNP C -> T AC=1;AN=200;BQB=0.430887;DP=4365;DP4=2115,1992,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000229095;MQB=1.80817e-05;MQSB=0.956073;RPB=0.677391;SGB=11.2488;VDB=0.134903;EFF=INTRON(MODIFIER||||229|LOC_Os04g23960|protein_coding|CODING|LOC_Os04g23960.1|1|1) FN2251-S.SNP.4:13699147 chr04:013699147 0 W/13699147-13699147 FN2251-S SNP C -> G AC=1;AN=190;BQB=0.65729;DP=5267;DP4=2457,2485,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.24452e-08;MQSB=0.441385;RPB=0.978458;SGB=62.7569;VDB=0.840371;EFF=INTRON(MODIFIER||||229|LOC_Os04g23960|protein_coding|CODING|LOC_Os04g23960.1|3|1) FN1478-S.SNP.4:13700494 chr04:013700494 0 W/13700494-13700494 FN1478-S Single Base Substitution C-T INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2378.SNP.4:13702502 chr04:013702502 0 W/13702502-13702502 FN2378 SNP A -> T AC=2;AN=192;BQB=0.251479;DP=4839;DP4=2218,2307,24,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.01344e-36;MQSB=0.877251;RPB=0.0879623;SGB=210.869;VDB=0.190847;EFF=INTRON(MODIFIER||||78|LOC_Os04g23970|protein_coding|CODING|LOC_Os04g23970.1|1|1) FN2328.SNP.4:13703013 chr04:013703013 0 W/13703013-13703013 FN2328 SNP A -> T AC=1;AN=192;BQB=0.954782;DP=4839;DP4=2284,2197,24,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206654;MQB=2.07853e-15;MQSB=0.993535;RPB=0.662363;SGB=89.6809;VDB=0.383702;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.4:13719613 chr04:013719613 0 W/13719613-13719613 FN4031-S SNP C -> T AC=1;AN=168;BQB=0.42373;DP=3107;DP4=1269,1699,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.210814;MQB=0.72042;MQSB=1.76564e-43;RPB=0.989054;SGB=34.3388;VDB=0.753164;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.4:13720879 chr04:013720879 0 W/13720879-13720879 FN391-S Single Base Substitution C-A INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1153-S.SNP.4:13722871 chr04:013722871 0 W/13722871-13722871 FN1153-S Single Base Substitution C-T INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN2681-S.SNP.4:13723513 chr04:013723513 0 W/13723513-13723513 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.80283;DP=4594;DP4=2139,2090,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000217675;MQB=1.42909e-08;MQSB=0.767157;RPB=0.529956;SGB=54.2646;VDB=0.67027;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.4:13723867 chr04:013723867 0 W/13723867-13723867 FN929-S Single Base Substitution G-A INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN3826-S.SNP.4:13725875 chr04:013725875 0 W/13725875-13725875 FN3826-S SNP C -> G AC=1;AN=190;BQB=0.879944;DP=2733;DP4=1432,1203,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1282e-07;MQSB=0.862284;RPB=0.985159;SGB=62.7569;VDB=0.254114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E165Q|203|LOC_Os04g24020|protein_coding|CODING|LOC_Os04g24020.1|1|1) FN2646-S.SNP.4:13728986 chr04:013728986 0 W/13728986-13728986 FN2646-S SNP T -> C AC=2;AN=200;BQB=0.100841;DP=5499;DP4=2992,2212,30,14;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.0247318;MQB=4.39527e-12;MQSB=4.6569e-10;RPB=0.936014;SGB=148.425;VDB=0.077925;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.4:13729900 chr04:013729900 0 W/13729900-13729900 FN811-S Single Base Substitution G-T INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3917-S.SNP.4:13730730 chr04:013730730 0 W/13730730-13730730 FN3917-S SNP C -> G AC=1;AN=158;BQB=0.377866;DP=2363;DP4=1396,852,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.00224605;MQSB=0.742065;RPB=0.999996;SGB=51.4366;VDB=0.925403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G126R|149|LOC_Os04g24030|protein_coding|CODING|LOC_Os04g24030.1|1|1) FN3653-S.SNP.4:13740520 chr04:013740520 0 W/13740520-13740520 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.78419;DP=3128;DP4=1508,1523,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.0837596;MQB=0.44861;MQSB=5.78876e-42;RPB=0.971993;SGB=15.9981;VDB=0.560775;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1546|1827|LOC_Os04g24060|protein_coding|CODING|LOC_Os04g24060.1|4|1) FN3503-S.SNP.4:13744020 chr04:013744020 0 W/13744020-13744020 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.773033;DP=3901;DP4=2228,1589,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=13;MQ0F=0.490387;MQB=0.0400396;MQSB=0.562711;RPB=0.4962;SGB=17.8846;VDB=0.989894;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q380*|1827|LOC_Os04g24060|protein_coding|CODING|LOC_Os04g24060.1|4|1) FN4088-S.SNP.4:13744020 chr04:013744020 0 W/13744020-13744020 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.487716;DP=3923;DP4=2496,1340,12,9;HOB=6.03792e-05;ICB=0.000121422;MQ=11;MQ0F=0.511598;MQB=0.0970203;MQSB=7.67254e-10;RPB=0.350215;SGB=63.7146;VDB=0.827052;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q380*|1827|LOC_Os04g24060|protein_coding|CODING|LOC_Os04g24060.1|4|1) FN4151-S.SNP.4:13744465 chr04:013744465 0 W/13744465-13744465 FN4151-S SNP A -> G AC=1;AN=170;BQB=0.780266;DP=3053;DP4=1366,1426,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.227317;MQB=0.306789;MQSB=0;RPB=0.737005;SGB=48.6486;VDB=0.269298;EFF=INTRON(MODIFIER||||1827|LOC_Os04g24060|protein_coding|CODING|LOC_Os04g24060.1|2|1) FN1394-S.SNP.4:13749138 chr04:013749138 0 W/13749138-13749138 FN1394-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g24070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1759-S.SNP.4:13752198 chr04:013752198 0 W/13752198-13752198 FN1759-S SNP A -> C AC=2;AN=188;BQB=7.11319e-12;DP=2558;DP4=1248,1156,110,25;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0089914;MQB=0;MQSB=9.80912e-06;RPB=0.00181301;SGB=-1298.32;VDB=3.81298e-08;EFF=INTRON(MODIFIER||||827|LOC_Os04g24080|protein_coding|CODING|LOC_Os04g24080.1|2|1) FN-275.SNP.4:13755037 chr04:013755037 0 W/13755037-13755037 FN-275 Single Base Substitution C-T INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2254-S.SNP.4:13756517 chr04:013756517 0 W/13756517-13756517 FN2254-S SNP T -> C AC=1;AN=190;BQB=0.225848;DP=5193;DP4=2328,2510,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0504525;MQB=0.748461;MQSB=2.85828e-06;RPB=0.866679;SGB=-12.1142;VDB=0.0675747;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.4:13758794 chr04:013758794 0 W/13758794-13758794 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.858841;DP=2685;DP4=1329,1296,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00297952;MQB=0.000141214;MQSB=0.0784512;RPB=0.841067;SGB=22.3266;VDB=0.995636;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.4:13761268 chr04:013761268 0 W/13761268-13761268 FN4253-S SNP G -> A AC=1;AN=170;BQB=0.894279;DP=2730;DP4=1232,1424,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02727e-07;MQSB=0.886954;RPB=0.96963;SGB=38.3207;VDB=0.128556;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.4:13761306 chr04:013761306 0 W/13761306-13761306 FN319-S Single Base Substitution G-A INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2653-S.SNP.4:13766709 chr04:013766709 0 W/13766709-13766709 FN2653-S SNP G -> A AC=2;AN=200;BQB=0.875975;DP=4859;DP4=2107,2451,34,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.11578e-32;MQSB=0.366182;RPB=0.817188;SGB=206.107;VDB=0.0427181;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.4:13770780 chr04:013770780 0 W/13770780-13770780 FN3342-S SNP G -> A AC=1;AN=184;BQB=0.863858;DP=2993;DP4=1325,1473,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.86048e-08;MQSB=0.981215;RPB=0.371065;SGB=53.2642;VDB=0.414247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.4:13771712 chr04:013771712 0 W/13771712-13771712 FN2462 SNP C -> A AC=1;AN=200;BQB=0.982486;DP=3598;DP4=1625,1773,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60263e-06;MQSB=0.0640971;RPB=0.980193;SGB=-0.141083;VDB=0.964083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P26Q|494|LOC_Os04g24110|protein_coding|CODING|LOC_Os04g24110.1|1|1) FN_789-3-1.SNP.4:13777200 chr04:013777200 0 W/13777200-13777200 FN_789-3-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN473-S.SNP.4:13778943 chr04:013778943 0 W/13778943-13778943 FN473-S Single Base Substitution T-A INTRON HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3800-S.SNP.4:13782048 chr04:013782048 0 W/13782048-13782048 FN3800-S SNP C -> G AC=2;AN=190;BQB=0.666716;DP=2179;DP4=1047,1040,8,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000458926;MQB=6.13686e-08;MQSB=0.270946;RPB=0.750141;SGB=8.77275;VDB=0.907298;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.4:13783085 chr04:013783085 0 W/13783085-13783085 FN715-S Single Base Substitution C-T INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN3493-S.SNP.4:13784228 chr04:013784228 0 W/13784228-13784228 FN3493-S SNP T -> G AC=2;AN=184;BQB=0.894895;DP=3270;DP4=1549,1370,20,13;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.107645;MQB=0.956942;MQSB=0;RPB=0.976666;SGB=-6.3654;VDB=0.129171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.4:13786619 chr04:013786619 0 W/13786619-13786619 FN1346-S Single Base Substitution C-T INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN-203.SNP.4:13789148 chr04:013789148 0 W/13789148-13789148 FN-203 Single Base Substitution G-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN2269-S.SNP.4:13790236 chr04:013790236 0 W/13790236-13790236 FN2269-S SNP T -> C AC=1;AN=190;BQB=0.750266;DP=5153;DP4=2524,2310,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000194062;MQB=3.60939e-19;MQSB=0.721942;RPB=0.942992;SGB=110.732;VDB=0.961598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.4:13790834 chr04:013790834 0 W/13790834-13790834 FN1109-S Single Base Substitution T-G INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3971-S.SNP.4:13804748 chr04:013804748 0 W/13804748-13804748 FN3971-S SNP T -> A AC=2;AN=168;BQB=0.998197;DP=2836;DP4=1330,1327,6,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20593e-06;MQSB=0.284203;RPB=0.999323;SGB=31.3172;VDB=0.987825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.4:13810359 chr04:013810359 0 W/13810359-13810359 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.326353;DP=3068;DP4=1598,1385,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000511216;MQSB=0.968233;RPB=0.457524;SGB=35.4339;VDB=0.429958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.4:13812445 chr04:013812445 0 W/13812445-13812445 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.589161;DP=2228;DP4=972,1161,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62827e-07;MQSB=0.995817;RPB=0.749853;SGB=47.5512;VDB=0.424812;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.4:13819503 chr04:013819503 0 W/13819503-13819503 FN-144 Single Base Substitution A-T INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-144.SNP.4:13819504 chr04:013819504 0 W/13819504-13819504 FN-144 Single Base Substitution C-T INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-388.SNP.4:13820592 chr04:013820592 0 W/13820592-13820592 FN-388 Single Base Substitution G-C INTERGENIC HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN-314.SNP.4:13831933 chr04:013831933 0 W/13831933-13831933 FN-314 Single Base Substitution T-A INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2454.SNP.4:13832110 chr04:013832110 0 W/13832110-13832110 FN2454 SNP T -> C AC=1;AN=200;BQB=0.956063;DP=4361;DP4=1988,2134,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.05406e-07;MQSB=0.953431;RPB=0.92619;SGB=40.4492;VDB=0.0830571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.4:13834097 chr04:013834097 0 W/13834097-13834097 FN2687-S SNP T -> C AC=1;AN=200;BQB=0.89618;DP=5123;DP4=2534,2322,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52785e-10;MQSB=0.999767;RPB=0.29062;SGB=47.4799;VDB=0.271923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.4:13839328 chr04:013839328 0 W/13839328-13839328 FN2554-S SNP G -> T AC=1;AN=198;BQB=0.959744;DP=4209;DP4=1878,2109,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.55512e-10;MQSB=0.630076;RPB=0.684444;SGB=42.3199;VDB=0.690424;EFF=INTRON(MODIFIER||||681|LOC_Os04g24180|protein_coding|CODING|LOC_Os04g24180.1|9|1),INTRON(MODIFIER||||681|LOC_Os04g24180|protein_coding|CODING|LOC_Os04g24180.2|8|1) FN3453-S.SNP.4:13843504 chr04:013843504 0 W/13843504-13843504 FN3453-S SNP A -> T AC=1;AN=184;BQB=0.250563;DP=3621;DP4=1654,1747,8,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.045e-12;MQSB=0.0958855;RPB=0.77467;SGB=-101.567;VDB=0.371545;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.4:13844301 chr04:013844301 0 W/13844301-13844301 FN242-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g24190 growth-regulating factor 11, putative, expressed SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN242-S.SNP.4:13844302 chr04:013844302 0 W/13844302-13844302 FN242-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2719-S.SNP.4:13854963 chr04:013854963 0 W/13854963-13854963 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.958022;DP=5035;DP4=2446,2320,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00019861;MQB=1.59909e-06;MQSB=0.637913;RPB=0.740739;SGB=3.06925;VDB=0.0429608;EFF=INTRON(MODIFIER||||704|LOC_Os04g24210|protein_coding|CODING|LOC_Os04g24210.1|1|1) FN1572-S.SNP.4:13856772 chr04:013856772 0 W/13856772-13856772 FN1572-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g24210 retrotransposon protein, putative, Ty1-copia subclass SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. W385-6-8-4.SNP.4:13859829 chr04:013859829 0 W/13859829-13859829 W385-6-8-4 Single Base Substitution G-A INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN4141-S.SNP.4:13865206 chr04:013865206 0 W/13865206-13865206 FN4141-S SNP G -> A AC=1;AN=170;BQB=0.979769;DP=2189;DP4=904,1221,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24267e-07;MQSB=0.948734;RPB=0.680839;SGB=43.4296;VDB=0.684374;EFF=INTRON(MODIFIER||||814|LOC_Os04g24220|protein_coding|CODING|LOC_Os04g24220.1|3|1),INTRON(MODIFIER||||531|LOC_Os04g24220|protein_coding|CODING|LOC_Os04g24220.3|3|1),INTRON(MODIFIER||||624|LOC_Os04g24220|protein_coding|CODING|LOC_Os04g24220.2|3|1) FN-166.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN-166 Single Base Substitution G-A INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1188-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN1188-S Single Base Substitution G-A INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1348-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN1348-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1630-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN1630-S Single Base Substitution G-A INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1707-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.0862547;DP=3527;DP4=1879,1611,18,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.91655e-10;MQSB=0.97469;RPB=0.928111;SGB=-131.719;VDB=0.148303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN2261-S SNP G -> A AC=2;AN=190;BQB=0.507947;DP=4767;DP4=2308,2070,53,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000209776;MQB=2.49431e-43;MQSB=0.876298;RPB=0.108011;SGB=228.745;VDB=0.0255124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.820136;DP=4933;DP4=2422,2226,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.45625e-11;MQSB=0.908518;RPB=0.802052;SGB=81.8956;VDB=0.143281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 FN3780-S SNP G -> A AC=1;AN=190;BQB=0.960583;DP=2709;DP4=1473,1134,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15134e-07;MQSB=0.906773;RPB=1;SGB=28.9929;VDB=0.0286304;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.4:13888214 chr04:013888214 0 W/13888214-13888214 W42-1-3S-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3626-S.SNP.4:13891326 chr04:013891326 0 W/13891326-13891326 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.977154;DP=2956;DP4=1415,1458,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17726e-08;MQSB=0.995223;RPB=0.895221;SGB=62.7569;VDB=0.022797;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.4:13892779 chr04:013892779 0 W/13892779-13892779 FN4098-S SNP C -> A AC=1;AN=182;BQB=0.916332;DP=3049;DP4=1710,1281,8,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.48903e-05;MQSB=0.826578;RPB=0.0137339;SGB=25.0952;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.4:13893386 chr04:013893386 0 W/13893386-13893386 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.800908;DP=3172;DP4=1536,1563,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.55498e-10;MQSB=0.962695;RPB=0.0571265;SGB=25.7969;VDB=0.668172;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.4:13897506 chr04:013897506 0 W/13897506-13897506 FN4240-S SNP T -> C AC=2;AN=170;BQB=0.59941;DP=2637;DP4=1129,1232,9,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.4524e-15;MQSB=0.989527;RPB=0.203834;SGB=101.184;VDB=0.0741829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.4:13901420 chr04:013901420 0 W/13901420-13901420 FN1736-S SNP C -> T AC=2;AN=188;BQB=0.684634;DP=3139;DP4=1404,1677,11,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.7768e-15;MQSB=0.999791;RPB=0.817031;SGB=31.7742;VDB=0.268457;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.4:13909426 chr04:013909426 0 W/13909426-13909426 FN889-S Single Base Substitution A-T INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN1103-S.SNP.4:13911085 chr04:013911085 0 W/13911085-13911085 FN1103-S Single Base Substitution A-G INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1422-S.SNP.4:13911886 chr04:013911886 0 W/13911886-13911886 FN1422-S Single Base Substitution G-A INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2594-S.SNP.4:13912119 chr04:013912119 0 W/13912119-13912119 FN2594-S SNP C -> A AC=1;AN=198;BQB=0.758005;DP=6355;DP4=3402,2525,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0169945;MQB=0.0250758;MQSB=0.00066646;RPB=0.982549;SGB=-7.28946;VDB=0.847438;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.4:13913122 chr04:013913122 0 W/13913122-13913122 FN4001-S SNP C -> G AC=1;AN=168;BQB=0.997319;DP=1251;DP4=445,724,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.0124226;MQSB=0.918355;RPB=0.98287;SGB=34.4498;VDB=0.648333;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S55|536|LOC_Os04g24290|protein_coding|CODING|LOC_Os04g24290.1|1|1) FN2651-S.SNP.4:13914169 chr04:013914169 0 W/13914169-13914169 FN2651-S SNP G -> T AC=1;AN=200;BQB=0.504521;DP=4916;DP4=2339,2362,19,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.71734e-20;MQSB=0.965375;RPB=0.815638;SGB=150.973;VDB=0.2437;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E240*|536|LOC_Os04g24290|protein_coding|CODING|LOC_Os04g24290.1|2|1) FN1596-S.SNP.4:13917986 chr04:013917986 0 W/13917986-13917986 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN3347-S.SNP.4:13919437 chr04:013919437 0 W/13919437-13919437 FN3347-S SNP G -> A AC=2;AN=184;BQB=0.999855;DP=2666;DP4=1276,1285,16,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11182e-18;MQSB=0.998565;RPB=0.817934;SGB=157.265;VDB=0.300658;EFF=UTR_3_PRIME(MODIFIER||378||68|LOC_Os04g24294|protein_coding|CODING|LOC_Os04g24294.2|3|1),UTR_3_PRIME(MODIFIER||378||68|LOC_Os04g24294|protein_coding|CODING|LOC_Os04g24294.1|5|1) FN4146-S.SNP.4:13927923 chr04:013927923 0 W/13927923-13927923 FN4146-S SNP C -> G AC=1;AN=170;BQB=0.995996;DP=2481;DP4=1151,1264,7,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.83455e-13;MQSB=0.974883;RPB=0.610652;SGB=83.4133;VDB=0.681862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.4:13929062 chr04:013929062 0 W/13929062-13929062 FN2281 SNP G -> A AC=1;AN=192;BQB=0.738651;DP=4458;DP4=1971,1998,18,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000224316;MQB=5.32647e-19;MQSB=0.0905472;RPB=0.891982;SGB=-5.17475;VDB=0.082544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.4:13929063 chr04:013929063 0 W/13929063-13929063 FN2281 SNP C -> G AC=1;AN=192;BQB=0.892241;DP=4460;DP4=2067,2035,21,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.24162e-20;MQSB=0.0924353;RPB=0.785876;SGB=-43.6052;VDB=0.222645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.4:13940221 chr04:013940221 0 W/13940221-13940221 FN2315 SNP A -> T AC=1;AN=192;BQB=0.0383722;DP=9096;DP4=4932,3777,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.12522;MQB=0.753091;MQSB=0;RPB=0.998208;SGB=21.4339;VDB=0.831116;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.4:13940734 chr04:013940734 0 W/13940734-13940734 FN-149 Single Base Substitution G-A INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN937-S.SNP.4:13945706 chr04:013945706 0 W/13945706-13945706 FN937-S Single Base Substitution T-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN-285.SNP.4:13945823 chr04:013945823 0 W/13945823-13945823 FN-285 Single Base Substitution T-A INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2179-S.SNP.4:13951889 chr04:013951889 0 W/13951889-13951889 FN2179-S SNP A -> G AC=1;AN=168;BQB=0.280292;DP=3374;DP4=1132,2210,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.87374e-07;MQSB=0.8069;RPB=0.944998;SGB=-14.0801;VDB=0.389889;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.4:13953184 chr04:013953184 0 W/13953184-13953184 FN664-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. CW-631-3-1.SNP.4:13953705 chr04:013953705 0 W/13953705-13953705 CW-631-3-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g24350 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. 822-5-6.SNP.4:13961091 chr04:013961091 0 W/13961091-13961091 822-5-6 Single Base Substitution T-C INTERGENIC Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN949-S.SNP.4:13961398 chr04:013961398 0 W/13961398-13961398 FN949-S Single Base Substitution C-G INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN-291.SNP.4:13966441 chr04:013966441 0 W/13966441-13966441 FN-291 Single Base Substitution G-A INTERGENIC HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1716-S.SNP.4:13969216 chr04:013969216 0 W/13969216-13969216 FN1716-S SNP A -> T AC=2;AN=188;BQB=0.530506;DP=2208;DP4=1749,395,28,3;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.61825e-12;MQSB=1.6686e-05;RPB=0.991222;SGB=28.6876;VDB=0.908513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.4:13972095 chr04:013972095 0 W/13972095-13972095 FN1006-S Single Base Substitution T-A INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN778-S.SNP.4:13977688 chr04:013977688 0 W/13977688-13977688 FN778-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g24370 retrotransposon protein, putative, unclassified, expressed SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3843-S.SNP.4:13981531 chr04:013981531 0 W/13981531-13981531 FN3843-S SNP G -> A AC=1;AN=190;BQB=0.958284;DP=3243;DP4=1716,1427,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.65512e-12;MQSB=0.37527;RPB=0.0609164;SGB=89.4087;VDB=0.734174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A62V|72|LOC_Os04g24380|protein_coding|CODING|LOC_Os04g24380.1|2|1) FN681-S.SNP.4:13987287 chr04:013987287 0 W/13987287-13987287 FN681-S Single Base Substitution T-C INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3418-S.SNP.4:13987784 chr04:013987784 0 W/13987784-13987784 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.859126;DP=3168;DP4=1542,1536,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000315657;MQB=0.000766148;MQSB=0.964416;RPB=0.981246;SGB=66.8296;VDB=0.0975649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D86N|169|LOC_Os04g24400|protein_coding|CODING|LOC_Os04g24400.1|1|1) FN-298.SNP.4:13993598 chr04:013993598 0 W/13993598-13993598 FN-298 Single Base Substitution T-C INTRON HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN758-S.SNP.4:14006989 chr04:014006989 0 W/14006989-14006989 FN758-S Single Base Substitution C-T INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN758-S.SNP.4:14007007 chr04:014007007 0 W/14007007-14007007 FN758-S Single Base Substitution C-G INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN509-S.SNP.4:14013054 chr04:014013054 0 W/14013054-14013054 FN509-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g24430 sucrose synthase, putative, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN633-S.SNP.4:14014457 chr04:014014457 0 W/14014457-14014457 FN633-S Single Base Substitution C-T INTERGENIC HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN631-S.SNP.4:14014971 chr04:014014971 0 W/14014971-14014971 FN631-S Single Base Substitution T-C INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2252-S.SNP.4:14018277 chr04:014018277 0 W/14018277-14018277 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.417257;DP=4790;DP4=2277,2099,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0478079;MQB=0.812404;MQSB=0;RPB=0.136355;SGB=-15.4375;VDB=0.62644;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.4:14029366 chr04:014029366 0 W/14029366-14029366 FN4279-S SNP T -> G AC=2;AN=170;BQB=0.970688;DP=2457;DP4=1216,1086,16,16;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.0590151;MQB=0.165003;MQSB=0.795733;RPB=0.256385;SGB=63.8516;VDB=0.205056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.4:14034374 chr04:014034374 0 W/14034374-14034374 FN3964-S SNP A -> C AC=1;AN=168;BQB=0.621942;DP=2845;DP4=1342,1386,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.208084;MQB=0.945655;MQSB=0;RPB=0.596682;SGB=65.6253;VDB=0.729288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.4:14035071 chr04:014035071 0 W/14035071-14035071 FN2713-S SNP G -> C AC=2;AN=200;BQB=0.68034;DP=4746;DP4=2264,2172,22,22;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0.0680573;MQB=0.216076;MQSB=0;RPB=0.932388;SGB=197.025;VDB=0.217808;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.4:14044405 chr04:014044405 0 W/14044405-14044405 FN864-S Single Base Substitution T-A INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN-298.SNP.4:14066027 chr04:014066027 0 W/14066027-14066027 FN-298 Single Base Substitution A-T INTERGENIC HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2421.SNP.4:14066034 chr04:014066034 0 W/14066034-14066034 FN2421 SNP G -> T AC=1;AN=200;BQB=0.806993;DP=4777;DP4=2223,2281,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.96331e-11;MQSB=0.998949;RPB=0.325726;SGB=39.9056;VDB=0.814569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.4:14068303 chr04:014068303 0 W/14068303-14068303 FN3776-S SNP C -> T AC=2;AN=190;BQB=0.758758;DP=3283;DP4=1915,1254,17,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.74781e-21;MQSB=0.998677;RPB=0.893888;SGB=149.281;VDB=0.147233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.4:14071034 chr04:014071034 0 W/14071034-14071034 FN2683-S SNP A -> G AC=1;AN=200;BQB=0.498999;DP=5081;DP4=2499,2433,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.84429e-11;MQSB=0.979232;RPB=0.684711;SGB=47.7211;VDB=0.598008;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.4:14082975 chr04:014082975 0 W/14082975-14082975 W450-6-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3804-S.SNP.4:14083998 chr04:014083998 0 W/14083998-14083998 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.609391;DP=2754;DP4=1381,1245,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68281e-07;MQSB=0.259228;RPB=0.974489;SGB=43.2083;VDB=0.0928844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.4:14083999 chr04:014083999 0 W/14083999-14083999 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.909405;DP=2739;DP4=1354,1226,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.98836e-09;MQSB=0.219003;RPB=0.981777;SGB=58.2031;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.4:14088902 chr04:014088902 0 W/14088902-14088902 FN3902-S SNP A -> G AC=1;AN=158;BQB=0.99431;DP=2316;DP4=1164,1076,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.55587e-08;MQSB=0.999056;RPB=0.913748;SGB=40.8124;VDB=0.395459;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E186G|623|LOC_Os04g24550|protein_coding|CODING|LOC_Os04g24550.1|9|1) FN2653-S.SNP.4:14093741 chr04:014093741 0 W/14093741-14093741 FN2653-S SNP A -> C AC=2;AN=200;BQB=0.178855;DP=4623;DP4=2266,2100,27,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.76431e-23;MQSB=0.914111;RPB=0.0268752;SGB=99.8245;VDB=0.232248;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcC|S544|623|LOC_Os04g24550|protein_coding|CODING|LOC_Os04g24550.1|17|1) FN3381-S.SNP.4:14095877 chr04:014095877 0 W/14095877-14095877 FN3381-S SNP T -> C AC=1;AN=184;BQB=0.862176;DP=3528;DP4=1510,1874,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.7667e-09;MQSB=0.965554;RPB=0.964919;SGB=39.2697;VDB=0.679222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.4:14097865 chr04:014097865 0 W/14097865-14097865 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.353833;DP=4759;DP4=2572,1895,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77023e-06;MQSB=0.631426;RPB=0.481313;SGB=4.67442;VDB=0.0206883;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.4:14097914 chr04:014097914 0 W/14097914-14097914 FN543-S Single Base Substitution T-C INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN4230-S.SNP.4:14100814 chr04:014100814 0 W/14100814-14100814 FN4230-S SNP G -> T AC=1;AN=170;BQB=0.578439;DP=2206;DP4=1094,1040,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000266836;MQSB=0.966325;RPB=0.346116;SGB=17.6652;VDB=0.333755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.4:14101521 chr04:014101521 0 W/14101521-14101521 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.999382;DP=2537;DP4=1180,1275,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12339e-07;MQSB=0.675251;RPB=0.714707;SGB=58.2031;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.4:14106138 chr04:014106138 0 W/14106138-14106138 W721-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2671-S.SNP.4:14110288 chr04:014110288 0 W/14110288-14110288 FN2671-S SNP G -> A AC=1;AN=200;BQB=0.528194;DP=9582;DP4=4504,4514,16,14;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.296076;MQB=0.000295912;MQSB=0.241953;RPB=0.391308;SGB=97.9523;VDB=0.0528463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.4:14114256 chr04:014114256 0 W/14114256-14114256 FN2688-S SNP C -> T AC=2;AN=200;BQB=0.999728;DP=4534;DP4=2194,2038,20,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000220556;MQB=5.47228e-15;MQSB=0.923398;RPB=0.923696;SGB=60.747;VDB=0.98237;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.4:14117070 chr04:014117070 0 W/14117070-14117070 FN4125-S SNP C -> A AC=1;AN=182;BQB=0.824122;DP=3336;DP4=1646,1610,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.00479616;MQB=0.00205023;MQSB=0.544475;RPB=0.701458;SGB=20.6332;VDB=0.604518;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.4:14117316 chr04:014117316 0 W/14117316-14117316 FN4050-S SNP G -> A AC=2;AN=168;BQB=0.790979;DP=2961;DP4=1380,1442,27,25;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00810537;MQB=2.18217e-16;MQSB=0.00226927;RPB=0.322812;SGB=97.9867;VDB=0.735109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.4:14118574 chr04:014118574 0 W/14118574-14118574 FN2740-S SNP A -> T AC=1;AN=200;BQB=0.978454;DP=4259;DP4=2072,2024,12,8;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.0471942;MQB=0.966759;MQSB=0;RPB=0.852639;SGB=61.9006;VDB=0.115187;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P323|858|LOC_Os04g24580|protein_coding|CODING|LOC_Os04g24580.1|2|1) FN1442-S.SNP.4:14119674 chr04:014119674 0 W/14119674-14119674 FN1442-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN-275.SNP.4:14121693 chr04:014121693 0 W/14121693-14121693 FN-275 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g24590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3824-S.SNP.4:14149019 chr04:014149019 0 W/14149019-14149019 FN3824-S SNP T -> C AC=1;AN=190;BQB=0.643456;DP=4860;DP4=2457,2164,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.250206;MQB=0.0770634;MQSB=0.00650486;RPB=0.999999;SGB=-13.222;VDB=0.927081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y928C|1480|LOC_Os04g24650|protein_coding|CODING|LOC_Os04g24650.1|6|1) FN2453.SNP.4:14151688 chr04:014151688 0 W/14151688-14151688 FN2453 SNP T -> G AC=1;AN=200;BQB=0.975935;DP=4470;DP4=1826,1923,8,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0744966;MQB=0.996862;MQSB=4.51578e-08;RPB=0.18606;SGB=34.6953;VDB=0.106164;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D164A|1480|LOC_Os04g24650|protein_coding|CODING|LOC_Os04g24650.1|3|1) FN4154-S.SNP.4:14153297 chr04:014153297 0 W/14153297-14153297 FN4154-S SNP G -> A AC=1;AN=170;BQB=0.900493;DP=2256;DP4=1041,1141,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.11369e-07;MQSB=0.853678;RPB=0.934665;SGB=47.8722;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.4:14155898 chr04:014155898 0 W/14155898-14155898 FN1224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1258-S.SNP.4:14155898 chr04:014155898 0 W/14155898-14155898 FN1258-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2444.SNP.4:14155898 chr04:014155898 0 W/14155898-14155898 FN2444 SNP G -> A AC=2;AN=200;BQB=0.471096;DP=3270;DP4=1693,1399,22,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.54366e-17;MQSB=0.0683426;RPB=0.999997;SGB=101.557;VDB=0.694454;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.4:14155898 chr04:014155898 0 W/14155898-14155898 FN784-S Single Base Substitution G-A INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN757-S.SNP.4:14176536 chr04:014176536 0 W/14176536-14176536 FN757-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g24690 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2713-S.SNP.4:14187180 chr04:014187180 0 W/14187180-14187180 FN2713-S SNP G -> T AC=1;AN=200;BQB=0.910338;DP=4798;DP4=2379,2133,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50604e-05;MQSB=0.973453;RPB=0.614824;SGB=40.4492;VDB=0.653136;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P194T|502|LOC_Os04g24710|protein_coding|CODING|LOC_Os04g24710.1|1|1) FN-155.SNP.4:14189463 chr04:014189463 0 W/14189463-14189463 FN-155 Single Base Substitution G-C INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3832-S.SNP.4:14201572 chr04:014201572 0 W/14201572-14201572 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.952005;DP=2702;DP4=1541,1039,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19513e-09;MQSB=0.984302;RPB=0.906855;SGB=43.2083;VDB=0.025084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:14201602 chr04:014201602 0 W/14201602-14201602 FN2657-S SNP T -> A AC=2;AN=200;BQB=0.739229;DP=4952;DP4=2644,2072,28,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.46339e-34;MQSB=0.817167;RPB=0.949261;SGB=128.481;VDB=0.135465;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.4:14201685 chr04:014201685 0 W/14201685-14201685 W313-1-1-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2784-S.SNP.4:14203140 chr04:014203140 0 W/14203140-14203140 FN2784-S SNP A -> G AC=2;AN=198;BQB=0.137739;DP=4373;DP4=2262,1851,25,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.07023e-21;MQSB=0.919914;RPB=0.607286;SGB=224.163;VDB=0.724858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.4:14208752 chr04:014208752 0 W/14208752-14208752 FN2340 SNP C -> T AC=1;AN=192;BQB=0.879712;DP=5144;DP4=2041,2683,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23863e-09;MQSB=0.909134;RPB=0.157785;SGB=-12.5113;VDB=0.628046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.4:14211324 chr04:014211324 0 W/14211324-14211324 FN2469 SNP A -> T AC=1;AN=200;BQB=0.800873;DP=4684;DP4=2098,2212,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35195e-10;MQSB=0.8768;RPB=0.976509;SGB=32.0901;VDB=0.349544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.4:14213347 chr04:014213347 0 W/14213347-14213347 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.672664;DP=2768;DP4=1403,1262,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.0414093;MQSB=0.821592;RPB=0.934625;SGB=30.6558;VDB=0.244443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.4:14216517 chr04:014216517 0 W/14216517-14216517 FN2658-S SNP T -> A AC=2;AN=200;BQB=0.897764;DP=4506;DP4=2425,1732,36,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.51892e-27;MQSB=0.972562;RPB=0.998297;SGB=115.456;VDB=0.806811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.4:14220223 chr04:014220223 0 W/14220223-14220223 FN1485-S Single Base Substitution C-G INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN510-S.SNP.4:14222646 chr04:014222646 0 W/14222646-14222646 FN510-S Single Base Substitution C-G INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1182-S.SNP.4:14223349 chr04:014223349 0 W/14223349-14223349 FN1182-S Single Base Substitution T-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2562-S.SNP.4:14223449 chr04:014223449 0 W/14223449-14223449 FN2562-S SNP T -> C AC=1;AN=198;BQB=0.964349;DP=4090;DP4=1856,1978,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000244499;MQB=9.75337e-11;MQSB=0.428427;RPB=0.944378;SGB=52.7004;VDB=0.511456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.4:14224358 chr04:014224358 0 W/14224358-14224358 FN3657-S SNP C -> T AC=2;AN=190;BQB=0.942075;DP=3359;DP4=1576,1649,13,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000297708;MQB=7.8551e-19;MQSB=0.999934;RPB=0.656739;SGB=96.5165;VDB=0.582846;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.4:14237387 chr04:014237387 0 W/14237387-14237387 FN3854-S SNP T -> C AC=1;AN=158;BQB=0.901073;DP=2770;DP4=1498,1160,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.27474e-09;MQSB=0.996691;RPB=0.121453;SGB=40.8124;VDB=0.721586;EFF=INTERGENIC(MODIFIER||||||||||1) FN468-S.SNP.4:14240558 chr04:014240558 0 W/14240558-14240558 FN468-S Single Base Substitution G-C INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1070-S.SNP.4:14241939 chr04:014241939 0 W/14241939-14241939 FN1070-S Single Base Substitution C-T INTERGENIC HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-382.SNP.4:14248663 chr04:014248663 0 W/14248663-14248663 FN-382 Single Base Substitution C-T INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN-382.SNP.4:14248674 chr04:014248674 0 W/14248674-14248674 FN-382 Single Base Substitution A-T INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN-382.SNP.4:14248675 chr04:014248675 0 W/14248675-14248675 FN-382 Single Base Substitution A-T INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN2705-S.SNP.4:14251381 chr04:014251381 0 W/14251381-14251381 FN2705-S SNP T -> G AC=1;AN=200;BQB=0.86915;DP=4809;DP4=2401,2212,5,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00228738;MQB=0.00192438;MQSB=0.192727;RPB=0.476531;SGB=-0.141083;VDB=0.254982;EFF=INTRON(MODIFIER||||131|LOC_Os04g24804|protein_coding|CODING|LOC_Os04g24804.1|2|1) FN2378.SNP.4:14258106 chr04:014258106 0 W/14258106-14258106 FN2378 SNP T -> A AC=2;AN=192;BQB=0.839941;DP=5100;DP4=2531,2253,31,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.56176e-32;MQSB=0.987086;RPB=0.5105;SGB=200.176;VDB=0.960326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.4:14258964 chr04:014258964 0 W/14258964-14258964 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.959294;DP=2760;DP4=1216,1406,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.42402e-05;MQSB=0.000491674;RPB=0.96296;SGB=25.439;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.4:14264655 chr04:014264655 0 W/14264655-14264655 FN1490-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2620-S.SNP.4:14266020 chr04:014266020 0 W/14266020-14266020 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.589537;DP=3804;DP4=1993,1586,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07236e-16;MQSB=0.72571;RPB=0.731803;SGB=55.2955;VDB=0.500056;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L55|538|LOC_Os04g24820|protein_coding|CODING|LOC_Os04g24820.1|1|1) FN969-S.SNP.4:14281488 chr04:014281488 0 W/14281488-14281488 FN969-S Single Base Substitution G-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN4068-S.SNP.4:14285686 chr04:014285686 0 W/14285686-14285686 FN4068-S SNP G -> A AC=1;AN=182;BQB=0.814349;DP=6162;DP4=2640,3414,9,20;HOB=6.03792e-05;ICB=0.000121422;MQ=23;MQ0F=0.0994807;MQB=0.792438;MQSB=4.90875e-05;RPB=0.722585;SGB=125.307;VDB=0.78726;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G189|216|LOC_Os04g24830|protein_coding|CODING|LOC_Os04g24830.1|4|1) FN4075-S.SNP.4:14314490 chr04:014314490 0 W/14314490-14314490 FN4075-S SNP C -> A AC=1;AN=182;BQB=0.974182;DP=2799;DP4=1373,1342,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.0557342;MQB=0.00464737;MQSB=9.22746e-10;RPB=0.547337;SGB=53.1331;VDB=0.274794;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.4:14314491 chr04:014314491 0 W/14314491-14314491 FN4075-S SNP T -> A AC=1;AN=182;BQB=0.957494;DP=2802;DP4=1396,1358,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.0567452;MQB=0.00485306;MQSB=6.72668e-11;RPB=0.56013;SGB=53.1331;VDB=0.291302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.4:14315478 chr04:014315478 0 W/14315478-14315478 FN2366 SNP C -> T AC=2;AN=192;BQB=0.384049;DP=5095;DP4=2250,2382,29,14;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000392542;MQB=1.70037e-23;MQSB=0.995467;RPB=0.362989;SGB=0.468728;VDB=0.806592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.4:14315479 chr04:014315479 0 W/14315479-14315479 FN2366 SNP C -> T AC=2;AN=192;BQB=0.678812;DP=5115;DP4=2308,2446,26,17;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000977517;MQB=5.66507e-21;MQSB=0.967754;RPB=0.520829;SGB=95.587;VDB=0.929079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN1026-S Single Base Substitution A-C INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1175-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN1175-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1355-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN1355-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1415-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN1415-S Single Base Substitution A-C INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1514-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN1514-S Single Base Substitution A-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4009-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN4009-S SNP A -> C AC=1;AN=168;BQB=0.998563;DP=2956;DP4=1505,1310,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=16;MQ0F=0.546685;MQB=0.0407631;MQSB=0;RPB=0.915437;SGB=62.1945;VDB=0.986211;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN4181-S SNP A -> C AC=1;AN=170;BQB=0.999294;DP=2754;DP4=1393,1249,7,15;HOB=6.92042e-05;ICB=0.000139222;MQ=15;MQ0F=0.561365;MQB=0.25156;MQSB=0;RPB=0.928491;SGB=39.4251;VDB=0.870676;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.4:14317018 chr04:014317018 0 W/14317018-14317018 FN887-S Single Base Substitution A-C INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN1686-S.SNP.4:14319894 chr04:014319894 0 W/14319894-14319894 FN1686-S SNP A -> T AC=1;AN=188;BQB=0.0388604;DP=3802;DP4=2078,1676,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.19253;MQB=0.276081;MQSB=0;RPB=0.479991;SGB=-66.2726;VDB=0.994308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.4:14327019 chr04:014327019 0 W/14327019-14327019 FN3443-S SNP C -> A AC=2;AN=184;BQB=0.725531;DP=3267;DP4=1251,1880,7,28;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00795837;MQB=8.2451e-17;MQSB=0.368305;RPB=0.436611;SGB=152.744;VDB=0.888824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.4:14328301 chr04:014328301 0 W/14328301-14328301 FN2752-S SNP A -> G AC=1;AN=200;BQB=0.780802;DP=5055;DP4=2594,2268,12,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00672601;MQB=6.01641e-09;MQSB=5.47057e-13;RPB=0.984258;SGB=95.7111;VDB=0.265537;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.4:14329374 chr04:014329374 0 W/14329374-14329374 FN4047-S SNP T -> C AC=1;AN=168;BQB=0.936665;DP=2770;DP4=1317,1321,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000361011;MQB=1.53028e-05;MQSB=0.9778;RPB=0.907583;SGB=34.4498;VDB=0.97104;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.4:14329900 chr04:014329900 0 W/14329900-14329900 FN509-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g24860 retrotransposon protein, putative, unclassified, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2237-S.SNP.4:14331773 chr04:014331773 0 W/14331773-14331773 FN2237-S SNP T -> C AC=1;AN=190;BQB=0.624853;DP=5151;DP4=2602,1950,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11532e-07;MQSB=0.996298;RPB=0.96051;SGB=58.2031;VDB=0.886474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D329G|349|LOC_Os04g24870|protein_coding|CODING|LOC_Os04g24870.1|1|1) FN4275-S.SNP.4:14334751 chr04:014334751 0 W/14334751-14334751 FN4275-S SNP C -> T AC=1;AN=170;BQB=0.776144;DP=2667;DP4=1288,1271,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0191226;MQB=0.0010772;MQSB=0.720077;RPB=0.983969;SGB=48.6486;VDB=0.0216206;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E253|596|LOC_Os04g24880|protein_coding|CODING|LOC_Os04g24880.1|3|1) FN3539-S.SNP.4:14334796 chr04:014334796 0 W/14334796-14334796 FN3539-S SNP G -> A AC=1;AN=188;BQB=0.914192;DP=3936;DP4=1920,1934,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0149898;MQB=0.0583766;MQSB=0.976845;RPB=0.186577;SGB=30.8063;VDB=0.131006;EFF=SPLICE_SITE_REGION(LOW||||596|LOC_Os04g24880|protein_coding|CODING|LOC_Os04g24880.1|2|1),INTRON(MODIFIER||||596|LOC_Os04g24880|protein_coding|CODING|LOC_Os04g24880.1|2|1) FN3879-S.SNP.4:14347046 chr04:014347046 0 W/14347046-14347046 FN3879-S SNP C -> G AC=1;AN=158;BQB=0.959755;DP=2801;DP4=1375,1279,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0357015;MQB=0.584523;MQSB=0.00169672;RPB=0.976396;SGB=50.9207;VDB=0.352198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.4:14347052 chr04:014347052 0 W/14347052-14347052 FN2421 SNP A -> T AC=1;AN=200;BQB=0.871581;DP=4852;DP4=2383,2188,8,13;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0222589;MQB=0.912044;MQSB=3.15701e-26;RPB=0.987742;SGB=39.9056;VDB=0.764047;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.4:14352887 chr04:014352887 0 W/14352887-14352887 FN935-S Single Base Substitution A-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2094-S.SNP.4:14352955 chr04:014352955 0 W/14352955-14352955 FN2094-S SNP C -> T AC=2;AN=168;BQB=0.568733;DP=2625;DP4=905,1661,14,29;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.000380952;MQB=0.00272512;MQSB=2.6118e-08;RPB=0.916908;SGB=-52.0269;VDB=0.911258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.4:14354850 chr04:014354850 0 W/14354850-14354850 FN2245-S SNP T -> C AC=2;AN=190;BQB=0.340664;DP=4298;DP4=1921,2026,13,8;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.00325733;MQB=0.00228176;MQSB=0;RPB=0.904573;SGB=64.5316;VDB=0.766882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.4:14360575 chr04:014360575 0 W/14360575-14360575 FN1270-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2447.SNP.4:14365534 chr04:014365534 0 W/14365534-14365534 FN2447 SNP A -> T AC=1;AN=200;BQB=0.262741;DP=4290;DP4=2076,1869,14,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0032634;MQB=0.000662509;MQSB=1.76801e-05;RPB=0.911701;SGB=60.747;VDB=0.50945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R274W|544|LOC_Os04g24940|protein_coding|CODING|LOC_Os04g24940.1|4|1) FN3746-S.SNP.4:14368989 chr04:014368989 0 W/14368989-14368989 FN3746-S SNP A -> C AC=2;AN=190;BQB=0.790143;DP=2435;DP4=1144,1189,12,7;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0517454;MQB=0.705713;MQSB=7.09802e-09;RPB=0.412957;SGB=80.9724;VDB=0.349049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:14376167 chr04:014376167 0 W/14376167-14376167 FN2618-S SNP G -> A AC=1;AN=192;BQB=0.36423;DP=3680;DP4=1726,1735,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0576087;MQB=0.834028;MQSB=1.30495e-13;RPB=0.504346;SGB=104.69;VDB=0.636661;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.4:14379172 chr04:014379172 0 W/14379172-14379172 FN4083-S SNP C -> G AC=2;AN=182;BQB=0.680849;DP=3331;DP4=1588,1632,18,22;HOB=0.0217365;ICB=0.494567;MQ=26;MQ0F=0.204143;MQB=0.685334;MQSB=0.31899;RPB=0.312904;SGB=130.421;VDB=0.267527;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.4:14388154 chr04:014388154 0 W/14388154-14388154 FN229-S Single Base Substitution A-G INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN229-S.SNP.4:14388164 chr04:014388164 0 W/14388164-14388164 FN229-S Single Base Substitution G-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1732-S.SNP.4:14409074 chr04:014409074 0 W/14409074-14409074 FN1732-S SNP C -> G AC=2;AN=188;BQB=0.996174;DP=2436;DP4=1217,1176,15,13;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0480296;MQB=0.000542522;MQSB=1.77173e-07;RPB=0.991745;SGB=89.1337;VDB=0.258717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L70V|787|LOC_Os04g25010|protein_coding|CODING|LOC_Os04g25010.1|2|1) FN3280-S.SNP.4:14436160 chr04:014436160 0 W/14436160-14436160 FN3280-S SNP C -> T AC=1;AN=184;BQB=0.860059;DP=3262;DP4=1375,1795,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.159411;MQB=0.255343;MQSB=9.69117e-08;RPB=0.994207;SGB=62.3078;VDB=0.203611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V67I|1731|LOC_Os04g25030|protein_coding|CODING|LOC_Os04g25030.1|3|1) FN4179-S.SNP.4:14439093 chr04:014439093 0 W/14439093-14439093 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.570661;DP=1934;DP4=807,959,10,19;HOB=0.0232526;ICB=0.494188;MQ=43;MQ0F=0.0227508;MQB=8.43285e-05;MQSB=5.44469e-14;RPB=0.422252;SGB=123.397;VDB=0.554044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.4:14442177 chr04:014442177 0 W/14442177-14442177 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.907523;DP=3380;DP4=1527,1708,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0292899;MQB=0.0744693;MQSB=0.92837;RPB=0.876828;SGB=30.704;VDB=0.896381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W459C|1355|LOC_Os04g25040|protein_coding|CODING|LOC_Os04g25040.1|3|1) FN2537-S.SNP.4:14445601 chr04:014445601 0 W/14445601-14445601 FN2537-S SNP G -> T AC=2;AN=190;BQB=0.580337;DP=3146;DP4=1029,1934,5,17;HOB=0.020831;ICB=0.494793;MQ=17;MQ0F=0.247616;MQB=0.918659;MQSB=0;RPB=0.739629;SGB=-10.8602;VDB=0.0115151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.4:14454723 chr04:014454723 0 W/14454723-14454723 FN2650-S SNP G -> T AC=1;AN=200;BQB=0.0944119;DP=4271;DP4=1727,2225,11,15;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.188949;MQB=0.452382;MQSB=0;RPB=0.755157;SGB=52.9314;VDB=0.132633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A19E|281|LOC_Os04g25060|protein_coding|CODING|LOC_Os04g25060.1|1|1) FN450-S.SNP.4:14463856 chr04:014463856 0 W/14463856-14463856 FN450-S Single Base Substitution A-G INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1646-S.SNP.4:14467616 chr04:014467616 0 W/14467616-14467616 FN1646-S Single Base Substitution G-T INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1247-S.SNP.4:14467688 chr04:014467688 0 W/14467688-14467688 FN1247-S Single Base Substitution C-G INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN1247-S.SNP.4:14467689 chr04:014467689 0 W/14467689-14467689 FN1247-S Single Base Substitution G-A INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN3553-S.SNP.4:14475998 chr04:014475998 0 W/14475998-14475998 FN3553-S SNP T -> G AC=1;AN=188;BQB=0.999676;DP=2849;DP4=1321,1453,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16101e-08;MQSB=0.786414;RPB=0.99506;SGB=39.5276;VDB=0.536579;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.4:14476336 chr04:014476336 0 W/14476336-14476336 FN976-S Single Base Substitution T-C INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1217-S.SNP.4:14477892 chr04:014477892 0 W/14477892-14477892 FN1217-S Single Base Substitution A-G INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN-187.SNP.4:14478273 chr04:014478273 0 W/14478273-14478273 FN-187 Single Base Substitution A-G INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-99.SNP.4:14480879 chr04:014480879 0 W/14480879-14480879 FN-99 Single Base Substitution T-C INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN670-S.SNP.4:14483264 chr04:014483264 0 W/14483264-14483264 FN670-S Single Base Substitution T-C INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN435-S.SNP.4:14507075 chr04:014507075 0 W/14507075-14507075 FN435-S Single Base Substitution C-T INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1662-S.SNP.4:14512646 chr04:014512646 0 W/14512646-14512646 FN1662-S Single Base Substitution A-G INTRON HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN3538-S.SNP.4:14516330 chr04:014516330 0 W/14516330-14516330 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.302355;DP=2971;DP4=1392,1476,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00138e-05;MQSB=0.94724;RPB=0.770534;SGB=-17.1729;VDB=0.278215;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.4:14518603 chr04:014518603 0 W/14518603-14518603 FN-201 Single Base Substitution T-G INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN3559-S.SNP.4:14520980 chr04:014520980 0 W/14520980-14520980 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.999969;DP=2670;DP4=1398,1171,18,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.88544e-13;MQSB=0.143927;RPB=0.81684;SGB=112.585;VDB=0.880501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.4:14521174 chr04:014521174 0 W/14521174-14521174 FN2697-S SNP T -> A AC=1;AN=200;BQB=0.180789;DP=5305;DP4=2584,2511,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.55265e-16;MQSB=0.73614;RPB=0.646289;SGB=90.7419;VDB=0.605942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.4:14521662 chr04:014521662 0 W/14521662-14521662 FN2494 SNP G -> A AC=1;AN=200;BQB=0.977431;DP=4825;DP4=1969,2540,8,11;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0768912;MQB=0.434593;MQSB=0;RPB=0.929552;SGB=58.2954;VDB=0.428934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.4:14522459 chr04:014522459 0 W/14522459-14522459 FN2451 SNP C -> A AC=1;AN=200;BQB=0.64149;DP=3204;DP4=1318,1682,15,14;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0296504;MQB=0.00273784;MQSB=6.78822e-10;RPB=0.298611;SGB=60.747;VDB=0.3237;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.4:14523863 chr04:014523863 0 W/14523863-14523863 FN921-S Single Base Substitution C-A INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN1316-S.SNP.4:14526659 chr04:014526659 0 W/14526659-14526659 FN1316-S Single Base Substitution G-C INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1316-S.SNP.4:14526660 chr04:014526660 0 W/14526660-14526660 FN1316-S Single Base Substitution C-A INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN996-S.SNP.4:14527657 chr04:014527657 0 W/14527657-14527657 FN996-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g25140 OsFBDUF20 - F-box and DUF domain containing protein, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3821-S.SNP.4:14531179 chr04:014531179 0 W/14531179-14531179 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.885625;DP=2496;DP4=1328,1018,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.39727e-06;MQSB=0.999932;RPB=0.841411;SGB=35.4339;VDB=0.460862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.4:14531180 chr04:014531180 0 W/14531180-14531180 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.895113;DP=2483;DP4=1319,1005,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.41212e-06;MQSB=0.999999;RPB=0.880628;SGB=35.4339;VDB=0.462804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.4:14533348 chr04:014533348 0 W/14533348-14533348 FN2535-S SNP T -> C AC=1;AN=186;BQB=0.43583;DP=4057;DP4=1664,2190,11,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.125e-13;MQSB=0.192683;RPB=0.831949;SGB=65.3149;VDB=0.0095446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.4:14533483 chr04:014533483 0 W/14533483-14533483 FN2204-S SNP T -> C AC=1;AN=190;BQB=0.98361;DP=5093;DP4=2384,2460,19,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000392696;MQB=8.33418e-17;MQSB=0.000962439;RPB=0.919783;SGB=144.727;VDB=0.906866;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.4:14537431 chr04:014537431 0 W/14537431-14537431 FN835-S Single Base Substitution A-G INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1349-S.SNP.4:14544461 chr04:014544461 0 W/14544461-14544461 FN1349-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN2791-S.SNP.4:14546746 chr04:014546746 0 W/14546746-14546746 FN2791-S SNP G -> A AC=1;AN=186;BQB=0.784488;DP=3432;DP4=1607,1622,8,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.33115e-10;MQSB=0.857568;RPB=0.767491;SGB=54.5295;VDB=0.713528;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN-144 Single Base Substitution G-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-237.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN-237 Single Base Substitution G-A INTERGENIC HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-346.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN-346 Single Base Substitution G-A INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN1108-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN1108-S Single Base Substitution G-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1243-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN1243-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1268-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN1268-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1344-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN1344-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1556-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN1556-S Single Base Substitution G-A INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2268-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN2268-S SNP G -> A AC=2;AN=190;BQB=0.450518;DP=4176;DP4=2036,1866,13,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000239464;MQB=8.48318e-11;MQSB=0.00317724;RPB=0.948287;SGB=60.9777;VDB=0.377852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN2304 SNP G -> A AC=2;AN=192;BQB=0.0134926;DP=4989;DP4=2375,2233,26,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.79842e-30;MQSB=0.704659;RPB=0.57241;SGB=12.32;VDB=0.585918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN2729-S SNP G -> A AC=2;AN=200;BQB=0.0136359;DP=4836;DP4=2252,2317,15,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05084e-18;MQSB=0.901519;RPB=0.783428;SGB=160.183;VDB=0.967054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.616295;DP=3836;DP4=1877,1828,18,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.0205e-17;MQSB=0.592921;RPB=0.995542;SGB=166.309;VDB=0.763646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN3456-S SNP G -> A AC=1;AN=184;BQB=0.989822;DP=3813;DP4=1877,1841,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.4198e-11;MQSB=0.788043;RPB=0.672192;SGB=30.8405;VDB=0.736217;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN3932-S SNP G -> A AC=2;AN=158;BQB=0.978149;DP=2454;DP4=1250,1108,9,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.54249e-10;MQSB=0.870614;RPB=0.96379;SGB=73.2838;VDB=0.597532;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN4090-S SNP G -> A AC=2;AN=180;BQB=0.999825;DP=3086;DP4=1542,1470,13,17;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=2.36788e-16;MQSB=0.862853;RPB=0.971432;SGB=60.807;VDB=0.64345;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN505-S Single Base Substitution G-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN764-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN764-S Single Base Substitution G-A INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN828-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN828-S Single Base Substitution G-A INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN901-S.SNP.4:14547660 chr04:014547660 0 W/14547660-14547660 FN901-S Single Base Substitution G-A INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2666-S.SNP.4:14548274 chr04:014548274 0 W/14548274-14548274 FN2666-S SNP T -> A AC=2;AN=200;BQB=0.0621121;DP=4634;DP4=2089,2126,36,37;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.71037e-39;MQSB=0.916064;RPB=0.781912;SGB=201.693;VDB=0.611185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D98E|145|LOC_Os04g25170|protein_coding|CODING|LOC_Os04g25170.1|1|1) FN-67.SNP.4:14549015 chr04:014549015 0 W/14549015-14549015 FN-67 Single Base Substitution A-G INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2752-S.SNP.4:14555339 chr04:014555339 0 W/14555339-14555339 FN2752-S SNP C -> T AC=2;AN=200;BQB=0.957087;DP=4067;DP4=2170,1597,6,8;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=2.69781e-05;MQSB=0.880669;RPB=0.555755;SGB=58.8698;VDB=0.39472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.4:14564992 chr04:014564992 0 W/14564992-14564992 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2272-S.SNP.4:14567068 chr04:014567068 0 W/14567068-14567068 FN2272-S SNP C -> G AC=1;AN=190;BQB=0.988544;DP=7140;DP4=3630,3047,29,25;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.000420168;MQB=1.50812e-25;MQSB=0.363612;RPB=0.0379089;SGB=181.81;VDB=0.000409049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.4:14567068 chr04:014567068 0 W/14567068-14567068 FN3554-S SNP C -> G AC=1;AN=188;BQB=0.977028;DP=4615;DP4=2251,1874,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.000433369;MQB=7.06219e-06;MQSB=0.0143265;RPB=0.24227;SGB=46.6141;VDB=0.248415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.4:14572693 chr04:014572693 0 W/14572693-14572693 FN1761-S SNP T -> C AC=1;AN=188;BQB=0.275243;DP=2340;DP4=973,1329,2,13;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.0401709;MQB=0.834024;MQSB=1.76299e-31;RPB=0.602807;SGB=-15.5431;VDB=0.112958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.4:14575820 chr04:014575820 0 W/14575820-14575820 FN1038-S Single Base Substitution T-G INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN2412.SNP.4:14577948 chr04:014577948 0 W/14577948-14577948 FN2412 SNP G -> C AC=1;AN=200;BQB=0.3924;DP=4759;DP4=2676,1763,11,5;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.294179;MQB=0.427024;MQSB=0.00123037;RPB=0.987563;SGB=26.8797;VDB=0.97548;EFF=UTR_5_PRIME(MODIFIER||29||362|LOC_Os04g25210|protein_coding|CODING|LOC_Os04g25210.1|1|1) FN1586-S.SNP.4:14579533 chr04:014579533 0 W/14579533-14579533 FN1586-S Single Base Substitution C-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2619-S.SNP.4:14584033 chr04:014584033 0 W/14584033-14584033 FN2619-S SNP C -> G AC=1;AN=198;BQB=0.999976;DP=4188;DP4=1876,2087,17,26;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0198185;MQB=0.00740183;MQSB=0.000374833;RPB=0.841049;SGB=49.2274;VDB=0.376087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.4:14586968 chr04:014586968 0 W/14586968-14586968 FN2166-S SNP T -> C AC=2;AN=168;BQB=0.0206992;DP=2811;DP4=1404,1351,19,23;HOB=0.0235261;ICB=0.494119;MQ=33;MQ0F=0.037709;MQB=0.566617;MQSB=0;RPB=0.300954;SGB=-283.582;VDB=0.109356;EFF=INTRON(MODIFIER||||116|LOC_Os04g25230|protein_coding|CODING|LOC_Os04g25230.1|1|1) FN2784-S.SNP.4:14592160 chr04:014592160 0 W/14592160-14592160 FN2784-S SNP G -> T AC=2;AN=198;BQB=0.727944;DP=4146;DP4=1968,1993,22,19;HOB=0.019998;ICB=0.495001;MQ=39;MQ0F=0.0279788;MQB=0.705255;MQSB=1.22356e-21;RPB=0.198096;SGB=46.0372;VDB=0.91981;EFF=INTRON(MODIFIER||||253|LOC_Os04g25250|protein_coding|CODING|LOC_Os04g25250.1|6|1) FN3979-S.SNP.4:14597451 chr04:014597451 0 W/14597451-14597451 FN3979-S SNP T -> C AC=1;AN=168;BQB=0.997626;DP=2285;DP4=1053,1060,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.19254e-07;MQSB=0.793352;RPB=0.625307;SGB=58.7637;VDB=0.646136;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.4:14602240 chr04:014602240 0 W/14602240-14602240 FN75-S-43 SNP C -> T AC=1;AN=190;BQB=0.254963;DP=10176;DP4=4202,5317,16,19;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000884434;MQB=2.02895e-11;MQSB=0.95528;RPB=0.760044;SGB=-202.103;VDB=0.883316;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.4:14605285 chr04:014605285 0 W/14605285-14605285 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.978548;DP=1792;DP4=729,955,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00223214;MQB=2.42657e-07;MQSB=0.00637063;RPB=0.122217;SGB=45.0404;VDB=0.0991356;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R41|95|LOC_Os04g25270|protein_coding|CODING|LOC_Os04g25270.1|1|1) FN2756-S.SNP.4:14605535 chr04:014605535 0 W/14605535-14605535 FN2756-S SNP C -> T AC=1;AN=200;BQB=0.848528;DP=3647;DP4=1526,1902,4,14;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.000548396;MQB=3.32624e-05;MQSB=1.06883e-39;RPB=0.770511;SGB=-13.1102;VDB=0.539204;EFF=INTRON(MODIFIER||||95|LOC_Os04g25270|protein_coding|CODING|LOC_Os04g25270.1|1|1) FN731-S.SNP.4:14607170 chr04:014607170 0 W/14607170-14607170 FN731-S Single Base Substitution A-G INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN-104.SNP.4:14613761 chr04:014613761 0 W/14613761-14613761 FN-104 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-98.SNP.4:14619311 chr04:014619311 0 W/14619311-14619311 FN-98 Single Base Substitution C-A INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1477-S.SNP.4:14622081 chr04:014622081 0 W/14622081-14622081 FN1477-S Single Base Substitution T-G INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2561-S.SNP.4:14626099 chr04:014626099 0 W/14626099-14626099 FN2561-S SNP C -> A AC=2;AN=198;BQB=0.699963;DP=4082;DP4=2029,1878,7,6;HOB=0.019998;ICB=0.495001;MQ=41;MQ0F=0.0132288;MQB=0.260493;MQSB=1.06354e-07;RPB=0.935217;SGB=54.144;VDB=0.745908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V161F|543|LOC_Os04g25300|protein_coding|CODING|LOC_Os04g25300.1|1|1) FN547-S.SNP.4:14627952 chr04:014627952 0 W/14627952-14627952 FN547-S Single Base Substitution A-C INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2758-S.SNP.4:14628076 chr04:014628076 0 W/14628076-14628076 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.940901;DP=4942;DP4=2456,2248,7,11;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0406718;MQB=0.0106165;MQSB=0.00133397;RPB=0.708655;SGB=54.6902;VDB=0.219731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.4:14628445 chr04:014628445 0 W/14628445-14628445 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.830506;DP=2723;DP4=1430,1211,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0;MQB=1.65817e-06;MQSB=2.72044e-11;RPB=0.662595;SGB=77.6532;VDB=0.151798;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.4:14629365 chr04:014629365 0 W/14629365-14629365 FN507-S Single Base Substitution T-A INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN2482.SNP.4:14630167 chr04:014630167 0 W/14630167-14630167 FN2482 SNP C -> A AC=1;AN=200;BQB=0.999816;DP=5701;DP4=2812,2653,6,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00315734;MQB=0.214438;MQSB=0;RPB=0.536102;SGB=29.4541;VDB=0.67433;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P11|159|LOC_Os04g25310|protein_coding|CODING|LOC_Os04g25310.1|1|1) FN2629-S.SNP.4:14632538 chr04:014632538 0 W/14632538-14632538 FN2629-S SNP A -> T AC=1;AN=200;BQB=0.687652;DP=2434;DP4=1253,1101,1,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00657354;MQB=0.00273375;MQSB=0.791092;RPB=0.947719;SGB=35.8441;VDB=0.0188473;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.4:14634163 chr04:014634163 0 W/14634163-14634163 FN-202 Single Base Substitution C-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN447-S.SNP.4:14634311 chr04:014634311 0 W/14634311-14634311 FN447-S Single Base Substitution G-C INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN-117.SNP.4:14642560 chr04:014642560 0 W/14642560-14642560 FN-117 Single Base Substitution G-A INTERGENIC HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN2688-S.SNP.4:14642842 chr04:014642842 0 W/14642842-14642842 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.624017;DP=5115;DP4=2616,2263,9,9;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.112414;MQB=0.986841;MQSB=1.18886e-21;RPB=0.741262;SGB=9.48993;VDB=0.83707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.4:14661094 chr04:014661094 0 W/14661094-14661094 FN2588-S SNP C -> A AC=1;AN=198;BQB=0.672833;DP=4150;DP4=2028,1941,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.55625e-12;MQSB=0.485069;RPB=0.054311;SGB=42.3199;VDB=0.707516;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.4:14663019 chr04:014663019 0 W/14663019-14663019 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.889603;DP=2592;DP4=1375,1087,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.57257e-07;MQSB=0.329329;RPB=0.616751;SGB=35.6277;VDB=0.157218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.4:14668467 chr04:014668467 0 W/14668467-14668467 FN1373-S Single Base Substitution C-T INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3288-S.SNP.4:14673922 chr04:014673922 0 W/14673922-14673922 FN3288-S SNP C -> T AC=2;AN=184;BQB=0.91912;DP=3632;DP4=1952,1540,16,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.82019e-19;MQSB=0.96714;RPB=0.631753;SGB=161.787;VDB=0.692353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.4:14674507 chr04:014674507 0 W/14674507-14674507 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.932282;DP=2520;DP4=1367,1114,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.16874e-08;MQSB=0.957242;RPB=0.69163;SGB=-16.2342;VDB=0.335123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.4:14675646 chr04:014675646 0 W/14675646-14675646 FN2767-S SNP A -> G AC=1;AN=198;BQB=0.991061;DP=3388;DP4=1612,1282,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.00501771;MQB=0.00649845;MQSB=3.62625e-18;RPB=0.174004;SGB=-40.2844;VDB=0.239346;EFF=UTR_5_PRIME(MODIFIER||66||327|LOC_Os04g25360|protein_coding|CODING|LOC_Os04g25360.1|1|1),UTR_5_PRIME(MODIFIER||66||263|LOC_Os04g25360|protein_coding|CODING|LOC_Os04g25360.2|1|1) FN-126.SNP.4:14676237 chr04:014676237 0 W/14676237-14676237 FN-126 Single Base Substitution A-T INTRON HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1206-S.SNP.4:14682344 chr04:014682344 0 W/14682344-14682344 FN1206-S Single Base Substitution G-A INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN2432.SNP.4:14694635 chr04:014694635 0 W/14694635-14694635 FN2432 SNP G -> A AC=2;AN=200;BQB=0.629229;DP=4516;DP4=2217,1952,18,28;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0112932;MQB=1.31208e-06;MQSB=0;RPB=0.857065;SGB=155.635;VDB=0.152881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.4:14696968 chr04:014696968 0 W/14696968-14696968 FN1725-S SNP C -> T AC=1;AN=188;BQB=0.633175;DP=3840;DP4=1972,1825,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000520833;MQB=4.7715e-09;MQSB=0.217805;RPB=0.548331;SGB=-69.186;VDB=0.502058;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.4:14697302 chr04:014697302 0 W/14697302-14697302 FN551-S Single Base Substitution T-A INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2418.SNP.4:14702314 chr04:014702314 0 W/14702314-14702314 FN2418 SNP G -> A AC=1;AN=200;BQB=0.9629;DP=4910;DP4=2384,2222,13,11;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.0912424;MQB=0.733661;MQSB=0;RPB=0.925731;SGB=19.1209;VDB=0.569048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.4:14704289 chr04:014704289 0 W/14704289-14704289 FN3797-S SNP C -> T AC=2;AN=190;BQB=0.931772;DP=2435;DP4=1258,1059,10,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00246407;MQB=1.82211e-07;MQSB=0.000916497;RPB=0.932163;SGB=67.3108;VDB=0.990292;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.4:14714142 chr04:014714142 0 W/14714142-14714142 FN2113-S SNP A -> C AC=1;AN=168;BQB=0.00368425;DP=4072;DP4=2248,1785,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.92697e-11;MQSB=0.932128;RPB=0.937609;SGB=-72.7757;VDB=0.610941;EFF=INTRON(MODIFIER||||306|LOC_Os04g25400|protein_coding|CODING|LOC_Os04g25400.2|6|1) FN471-S.SNP.4:14716133 chr04:014716133 0 W/14716133-14716133 FN471-S Single Base Substitution C-G INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2423.SNP.4:14724433 chr04:014724433 0 W/14724433-14724433 FN2423 SNP G -> T AC=1;AN=200;BQB=0.959948;DP=4956;DP4=2357,2300,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201776;MQB=2.51744e-07;MQSB=0.995096;RPB=0.476418;SGB=54.2646;VDB=0.301225;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.4:14729400 chr04:014729400 0 W/14729400-14729400 FN446-S Single Base Substitution C-A INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1236-S.SNP.4:14740305 chr04:014740305 0 W/14740305-14740305 FN1236-S Single Base Substitution A-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN589-S.SNP.4:14742644 chr04:014742644 0 W/14742644-14742644 FN589-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3519-S.SNP.4:14751594 chr04:014751594 0 W/14751594-14751594 FN3519-S SNP G -> A AC=2;AN=188;BQB=0.512754;DP=2799;DP4=1463,1268,11,10;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.0203644;MQB=0.149923;MQSB=0;RPB=0.737363;SGB=38.7926;VDB=0.584921;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1358S|2088|LOC_Os04g25454|protein_coding|CODING|LOC_Os04g25454.1|5|1) FN4135-S.SNP.4:14751594 chr04:014751594 0 W/14751594-14751594 FN4135-S SNP G -> A AC=2;AN=182;BQB=0.676065;DP=2741;DP4=1367,1285,21,21;HOB=0.0217365;ICB=0.494567;MQ=30;MQ0F=0.0222547;MQB=0.243565;MQSB=0;RPB=0.753324;SGB=137.443;VDB=0.576259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1358S|2088|LOC_Os04g25454|protein_coding|CODING|LOC_Os04g25454.1|5|1) FN828-S.SNP.4:14769625 chr04:014769625 0 W/14769625-14769625 FN828-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g25470 retrotransposon protein, putative, unclassified, expressed SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN2223-S.SNP.4:14771726 chr04:014771726 0 W/14771726-14771726 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.486148;DP=5575;DP4=2527,2601,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0482511;MQB=0.822546;MQSB=0;RPB=0.796766;SGB=-39.8934;VDB=0.461841;EFF=INTERGENIC(MODIFIER||||||||||1) FN697-S.SNP.4:14778207 chr04:014778207 0 W/14778207-14778207 FN697-S Single Base Substitution C-A INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN2158-S.SNP.4:14779186 chr04:014779186 0 W/14779186-14779186 FN2158-S SNP G -> A AC=2;AN=168;BQB=0.491763;DP=2439;DP4=1216,1160,18,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.50288e-14;MQSB=0.999905;RPB=0.878757;SGB=-11.0644;VDB=0.644655;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.4:14781521 chr04:014781521 0 W/14781521-14781521 FN2482 SNP G -> A AC=1;AN=200;BQB=0.514715;DP=4964;DP4=2124,2631,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000402901;MQB=7.95429e-06;MQSB=0.942272;RPB=0.982784;SGB=13.8539;VDB=0.177966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.4:14782207 chr04:014782207 0 W/14782207-14782207 FN1375-S Single Base Substitution T-C INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2730-S.SNP.4:14786124 chr04:014786124 0 W/14786124-14786124 FN2730-S SNP A -> T AC=1;AN=200;BQB=0.529871;DP=4840;DP4=2207,2310,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.33357e-10;MQSB=0.758782;RPB=0.495461;SGB=47.4799;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.4:14787421 chr04:014787421 0 W/14787421-14787421 FN3932-S SNP C -> T AC=1;AN=158;BQB=0.807499;DP=1799;DP4=724,988,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0305725;MQB=0.628785;MQSB=0.000433653;RPB=0.792718;SGB=16.7104;VDB=0.39534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P24L|475|LOC_Os04g25490|protein_coding|CODING|LOC_Os04g25490.1|1|1) FN726-S.SNP.4:14789100 chr04:014789100 0 W/14789100-14789100 FN726-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2753-S.SNP.4:14794999 chr04:014794999 0 W/14794999-14794999 FN2753-S SNP T -> G AC=2;AN=200;BQB=0.458785;DP=5022;DP4=2656,2144,24,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000398248;MQB=9.80326e-21;MQSB=0.496079;RPB=0.271063;SGB=44.8037;VDB=0.402813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.4:14804802 chr04:014804802 0 W/14804802-14804802 FN2240-S SNP C -> T AC=2;AN=190;BQB=0.874983;DP=5069;DP4=2442,2333,19,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.56193e-21;MQSB=0.715986;RPB=0.800201;SGB=128.501;VDB=0.522892;EFF=INTRON(MODIFIER||||145|LOC_Os04g25540|protein_coding|CODING|LOC_Os04g25540.1|1|1) FN2125-S.SNP.4:14805543 chr04:014805543 0 W/14805543-14805543 FN2125-S SNP G -> A AC=2;AN=168;BQB=0.972719;DP=3763;DP4=1939,1761,24,20;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000531491;MQB=3.85109e-13;MQSB=0.669471;RPB=0.999874;SGB=-4.17128;VDB=0.121004;EFF=UTR_3_PRIME(MODIFIER||84||145|LOC_Os04g25540|protein_coding|CODING|LOC_Os04g25540.1|3|1) FN757-S.SNP.4:14814684 chr04:014814684 0 W/14814684-14814684 FN757-S Single Base Substitution A-G INTRON HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN480-S.SNP.4:14826982 chr04:014826982 0 W/14826982-14826982 FN480-S Single Base Substitution A-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1470-S.SNP.4:14831915 chr04:014831915 0 W/14831915-14831915 FN1470-S Single Base Substitution G-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2611-S.SNP.4:14838191 chr04:014838191 0 W/14838191-14838191 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.608017;DP=4788;DP4=2225,2296,20,18;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0152464;MQB=0.824475;MQSB=0;RPB=0.760767;SGB=169.394;VDB=0.928932;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R450Q|2017|LOC_Os04g25600|protein_coding|CODING|LOC_Os04g25600.1|1|1) FN3389-S.SNP.4:14843758 chr04:014843758 0 W/14843758-14843758 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.432801;DP=4014;DP4=2146,1780,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0358744;MQB=0.791251;MQSB=2.30626e-24;RPB=0.831967;SGB=103.004;VDB=0.941986;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H989|1030|LOC_Os04g25610|protein_coding|CODING|LOC_Os04g25610.1|2|1) FN2411.SNP.4:14846897 chr04:014846897 0 W/14846897-14846897 FN2411 SNP C -> T AC=1;AN=200;BQB=0.755619;DP=4223;DP4=2106,1896,14,14;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0236798;MQB=0.000419161;MQSB=0.12257;RPB=0.719858;SGB=123.342;VDB=0.831615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.4:14848807 chr04:014848807 0 W/14848807-14848807 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.449541;DP=2575;DP4=1313,1119,10,107;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0;MQSB=0.0949951;RPB=4.37807e-16;SGB=-1370.25;VDB=5.17556e-13;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P141|238|LOC_Os04g25620|protein_coding|CODING|LOC_Os04g25620.1|3|1) FN2342.SNP.4:14851167 chr04:014851167 0 W/14851167-14851167 FN2342 SNP C -> A AC=2;AN=192;BQB=0.46761;DP=4380;DP4=1611,2208,14,14;HOB=0.0206163;ICB=0.494846;MQ=28;MQ0F=0.183333;MQB=0.0558763;MQSB=0;RPB=0.894761;SGB=89.6809;VDB=0.1875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.4:14851317 chr04:014851317 0 W/14851317-14851317 FN2667-S SNP G -> A AC=2;AN=200;BQB=0.637756;DP=4423;DP4=1792,2348,25,15;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0983495;MQB=0.473437;MQSB=0;RPB=0.319855;SGB=44.8037;VDB=0.55241;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.4:14852069 chr04:014852069 0 W/14852069-14852069 FN1205-S Single Base Substitution G-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1205-S.SNP.4:14852070 chr04:014852070 0 W/14852070-14852070 FN1205-S Single Base Substitution T-G INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN620-S.SNP.4:14852637 chr04:014852637 0 W/14852637-14852637 FN620-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g25630 transposon protein, putative, CACTA, En/Spm sub-class SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1463-S.SNP.4:14855947 chr04:014855947 0 W/14855947-14855947 FN1463-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g25640 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3940-S.SNP.4:14857746 chr04:014857746 0 W/14857746-14857746 FN3940-S SNP C -> T AC=2;AN=158;BQB=0.999381;DP=2545;DP4=1288,1128,22,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.36854e-18;MQSB=0.0952068;RPB=0.614983;SGB=156.303;VDB=0.765328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G409E|856|LOC_Os04g25640|protein_coding|CODING|LOC_Os04g25640.1|2|1) FN512-S.SNP.4:14859046 chr04:014859046 0 W/14859046-14859046 FN512-S Single Base Substitution C-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1692-S.SNP.4:14860190 chr04:014860190 0 W/14860190-14860190 FN1692-S SNP A -> G AC=1;AN=188;BQB=0.147201;DP=3196;DP4=1484,1659,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.02072e-09;MQSB=0.000946017;RPB=0.178266;SGB=-67.7293;VDB=0.0628407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.4:14865764 chr04:014865764 0 W/14865764-14865764 FN1042-S Single Base Substitution C-G INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN585-S.SNP.4:14866590 chr04:014866590 0 W/14866590-14866590 FN585-S Single Base Substitution A-G INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN3538-S.SNP.4:14867904 chr04:014867904 0 W/14867904-14867904 FN3538-S SNP G -> A AC=2;AN=188;BQB=0.964259;DP=2818;DP4=1105,1610,7,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.04969e-11;MQSB=0.00170189;RPB=0.490237;SGB=67.8739;VDB=0.621384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.4:14868582 chr04:014868582 0 W/14868582-14868582 FN2226-S SNP C -> G AC=1;AN=190;BQB=0.995032;DP=5031;DP4=2372,2240,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198768;MQB=2.4192e-07;MQSB=0.973328;RPB=0.253587;SGB=-34.9861;VDB=0.331891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.4:14874036 chr04:014874036 0 W/14874036-14874036 FN2551-S SNP G -> A AC=2;AN=198;BQB=0.889425;DP=4294;DP4=2026,1984,19,27;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.000698649;MQB=1.53163e-22;MQSB=0.0012897;RPB=0.915322;SGB=104.603;VDB=0.350394;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.4:14875728 chr04:014875728 0 W/14875728-14875728 FN2554-S SNP T -> A AC=1;AN=198;BQB=0.999562;DP=4069;DP4=1902,1987,11,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000245761;MQB=3.20518e-07;MQSB=0.928414;RPB=0.636582;SGB=36.5539;VDB=0.758614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.4:14875730 chr04:014875730 0 W/14875730-14875730 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.598773;DP=4055;DP4=1863,1967,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000246609;MQB=5.85012e-09;MQSB=0.935035;RPB=0.446508;SGB=6.15916;VDB=0.694045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.4:14875767 chr04:014875767 0 W/14875767-14875767 FN1278-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN-110.SNP.4:14877158 chr04:014877158 0 W/14877158-14877158 FN-110 Single Base Substitution T-C INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1240-S.SNP.4:14878011 chr04:014878011 0 W/14878011-14878011 FN1240-S Single Base Substitution G-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1526-S.SNP.4:14879797 chr04:014879797 0 W/14879797-14879797 FN1526-S Single Base Substitution A-G INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN738-S.SNP.4:14882260 chr04:014882260 0 W/14882260-14882260 FN738-S Single Base Substitution C-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN3437-S.SNP.4:14885653 chr04:014885653 0 W/14885653-14885653 FN3437-S SNP A -> T AC=2;AN=184;BQB=0.872434;DP=3452;DP4=1329,2001,8,19;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0373696;MQB=6.62832e-05;MQSB=0.637128;RPB=0.735928;SGB=53.5365;VDB=0.111114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:14892101 chr04:014892101 0 W/14892101-14892101 FN2618-S SNP G -> C AC=1;AN=198;BQB=0.95256;DP=4155;DP4=1979,2003,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0170878;MQB=1.53395e-06;MQSB=0.00333245;RPB=0.93892;SGB=29.3443;VDB=0.719999;EFF=INTRON(MODIFIER||||1034|LOC_Os04g25680|protein_coding|CODING|LOC_Os04g25680.1|1|1) FN2330.SNP.4:14892865 chr04:014892865 0 W/14892865-14892865 FN2330 SNP T -> G AC=1;AN=192;BQB=0.989659;DP=5086;DP4=2435,2336,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00786473;MQB=6.25866e-05;MQSB=0.933729;RPB=0.251246;SGB=57.1218;VDB=0.612921;EFF=INTRON(MODIFIER||||1034|LOC_Os04g25680|protein_coding|CODING|LOC_Os04g25680.1|3|1) FN-334.SNP.4:14892899 chr04:014892899 0 W/14892899-14892899 FN-334 Single Base Substitution T-A INTRON HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN4095-S.SNP.4:14904095 chr04:014904095 0 W/14904095-14904095 FN4095-S SNP G -> A AC=1;AN=182;BQB=0.936881;DP=2462;DP4=1131,1276,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.60334e-08;MQSB=0.995103;RPB=0.925563;SGB=62.1548;VDB=0.133364;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.4:14905768 chr04:014905768 0 W/14905768-14905768 FN4107-S SNP G -> C AC=1;AN=182;BQB=0.973641;DP=2983;DP4=1324,1554,2,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.02608e-05;MQSB=0.217584;RPB=0.828111;SGB=18.0739;VDB=0.734491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.4:14908499 chr04:014908499 0 W/14908499-14908499 FN3426-S SNP A -> T AC=2;AN=184;BQB=0.943504;DP=3307;DP4=1638,1530,22,15;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00786211;MQB=1.64513e-05;MQSB=0.0475822;RPB=0.296333;SGB=78.7544;VDB=0.714166;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.4:14908995 chr04:014908995 0 W/14908995-14908995 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.616588;DP=4746;DP4=2283,2202,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03638e-10;MQSB=0.998701;RPB=0.993945;SGB=64.5316;VDB=0.35668;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.4:14909605 chr04:014909605 0 W/14909605-14909605 FN-370 Single Base Substitution G-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2162-S.SNP.4:14910914 chr04:014910914 0 W/14910914-14910914 FN2162-S SNP G -> A AC=1;AN=168;BQB=0.184394;DP=3687;DP4=1697,1943,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0263087;MQB=0.779469;MQSB=0.000954988;RPB=0.14808;SGB=21.3605;VDB=0.837854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.4:14911052 chr04:014911052 0 W/14911052-14911052 FN1412-S Single Base Substitution G-C INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1271-S.SNP.4:14939565 chr04:014939565 0 W/14939565-14939565 FN1271-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g25750 retrotransposon protein, putative, unclassified SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1026-S.SNP.4:14940182 chr04:014940182 0 W/14940182-14940182 FN1026-S Single Base Substitution A-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1026-S.SNP.4:14940183 chr04:014940183 0 W/14940183-14940183 FN1026-S Single Base Substitution C-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN898-S.SNP.4:14960064 chr04:014960064 0 W/14960064-14960064 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN883-S.SNP.4:14963203 chr04:014963203 0 W/14963203-14963203 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3848-S.SNP.4:14965011 chr04:014965011 0 W/14965011-14965011 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.796501;DP=2822;DP4=1345,1340,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0152374;MQB=0.029555;MQSB=0.776488;RPB=0.762134;SGB=-3.39162;VDB=0.712309;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.4:14966498 chr04:014966498 0 W/14966498-14966498 FN723-S Single Base Substitution T-C INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1916.SNP.4:14969301 chr04:014969301 0 W/14969301-14969301 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN4093-S.SNP.4:15009549 chr04:015009549 0 W/15009549-15009549 FN4093-S SNP G -> T AC=1;AN=182;BQB=0.00701184;DP=4169;DP4=2484,1298,7,12;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.0609259;MQB=0.0133674;MQSB=1.29543e-06;RPB=0.991444;SGB=-107.845;VDB=0.319821;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.4:15028566 chr04:015028566 0 W/15028566-15028566 FN461-S Single Base Substitution T-G INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN2083-S.SNP.4:15028575 chr04:015028575 0 W/15028575-15028575 FN2083-S SNP C -> A AC=2;AN=168;BQB=0.99996;DP=3673;DP4=1806,1787,31,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.93304e-34;MQSB=0.999124;RPB=0.695118;SGB=-129.266;VDB=0.310914;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.4:15028846 chr04:015028846 0 W/15028846-15028846 W472-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1680-S.SNP.4:15029845 chr04:015029845 0 W/15029845-15029845 FN1680-S SNP A -> G AC=1;AN=188;BQB=0.417438;DP=4483;DP4=3158,1249,19,17;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.019204;MQSB=0;RPB=0.0598031;SGB=36.4041;VDB=0.0658565;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.4:15031383 chr04:015031383 0 W/15031383-15031383 FN437-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN1029-S.SNP.4:15036380 chr04:015036380 0 W/15036380-15036380 FN1029-S Single Base Substitution T-C INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2329.SNP.4:15036898 chr04:015036898 0 W/15036898-15036898 FN2329 SNP C -> T AC=1;AN=192;BQB=0.852024;DP=4882;DP4=2231,2332,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.1235e-09;MQSB=0.999978;RPB=0.246789;SGB=-10.8182;VDB=0.516965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.4:15038053 chr04:015038053 0 W/15038053-15038053 FN1042-S Single Base Substitution C-T INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1534-S.SNP.4:15039254 chr04:015039254 0 W/15039254-15039254 FN1534-S Single Base Substitution G-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2765-S.SNP.4:15044776 chr04:015044776 0 W/15044776-15044776 FN2765-S SNP T -> A AC=1;AN=186;BQB=0.408213;DP=3783;DP4=1756,1794,8,9;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.69167e-07;MQSB=0.943902;RPB=0.841571;SGB=-13.8358;VDB=0.948676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.4:15046990 chr04:015046990 0 W/15046990-15046990 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.966382;DP=2682;DP4=1237,1353,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.29111e-06;MQSB=0.999648;RPB=0.99347;SGB=28.7043;VDB=0.360212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.4:15051148 chr04:015051148 0 W/15051148-15051148 FN1572-S Single Base Substitution G-T INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN2418.SNP.4:15051229 chr04:015051229 0 W/15051229-15051229 FN2418 SNP G -> A AC=1;AN=200;BQB=0.976064;DP=4796;DP4=2225,2261,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22366e-08;MQSB=0.682595;RPB=0.0259951;SGB=43.8747;VDB=0.621909;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.4:15054529 chr04:015054529 0 W/15054529-15054529 FN3914-S SNP A -> C AC=1;AN=158;BQB=0.935499;DP=2490;DP4=1206,1208,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.09054e-05;MQSB=0.960681;RPB=0.150998;SGB=33.9591;VDB=0.228571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gGa|V1341G|1690|LOC_Os04g25890|protein_coding|CODING|LOC_Os04g25890.1|8|1) FN1707-S.SNP.4:15057041 chr04:015057041 0 W/15057041-15057041 FN1707-S SNP C -> A AC=1;AN=188;BQB=0.345799;DP=3451;DP4=1656,1748,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.14297e-09;MQSB=0.933345;RPB=0.960468;SGB=-12.8266;VDB=0.844031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G880V|1690|LOC_Os04g25890|protein_coding|CODING|LOC_Os04g25890.1|6|1) FN3729-S.SNP.4:15061731 chr04:015061731 0 W/15061731-15061731 FN3729-S SNP T -> A AC=1;AN=190;BQB=0.9988;DP=3157;DP4=1355,1652,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.74944e-10;MQSB=0.962802;RPB=0.652103;SGB=33.8752;VDB=0.879985;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.4:15070928 chr04:015070928 0 W/15070928-15070928 FN413-S Single Base Substitution G-T INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2265-S.SNP.4:15073767 chr04:015073767 0 W/15073767-15073767 FN2265-S SNP T -> C AC=1;AN=190;BQB=0.727803;DP=4741;DP4=1988,2417,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3595e-10;MQSB=0.98303;RPB=0.839825;SGB=80.9724;VDB=0.960759;EFF=INTRON(MODIFIER||||165|LOC_Os04g25910|protein_coding|CODING|LOC_Os04g25910.1|3|1) FN1227-S.SNP.4:15076645 chr04:015076645 0 W/15076645-15076645 FN1227-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. 703-2.SNP.4:15078601 chr04:015078601 0 W/15078601-15078601 703-2 Single Base Substitution A-G INTERGENIC Homo SNo: 1451, Mutant_ID: 703-2, Generation: M2, Mutations: 24, Genes: 23, Seed availability: Yes. FN-24.SNP.4:15079897 chr04:015079897 0 W/15079897-15079897 FN-24 Single Base Substitution C-T INTERGENIC Homo SNo: 24, Mutant_ID: FN-24, Generation: M2, Mutations: 27, Genes: 8, Seed availability: Yes. FN448-S.SNP.4:15080017 chr04:015080017 0 W/15080017-15080017 FN448-S Single Base Substitution T-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN431-S.SNP.4:15087792 chr04:015087792 0 W/15087792-15087792 FN431-S Single Base Substitution T-A INTRON HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN507-S.SNP.4:15088155 chr04:015088155 0 W/15088155-15088155 FN507-S Single Base Substitution C-T INTRON HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN825-S.SNP.4:15104815 chr04:015104815 0 W/15104815-15104815 FN825-S Single Base Substitution C-T INTRON HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1313-S.SNP.4:15110757 chr04:015110757 0 W/15110757-15110757 FN1313-S Single Base Substitution C-T INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN404-S.SNP.4:15110802 chr04:015110802 0 W/15110802-15110802 FN404-S Single Base Substitution A-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3413-S.SNP.4:15111408 chr04:015111408 0 W/15111408-15111408 FN3413-S SNP C -> T AC=2;AN=184;BQB=0.908747;DP=2246;DP4=1054,1133,10,11;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0409617;MQB=0.188355;MQSB=3.7981e-09;RPB=0.693236;SGB=89.4385;VDB=0.284158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.4:15112247 chr04:015112247 0 W/15112247-15112247 FN3522-S SNP C -> T AC=1;AN=188;BQB=0.997349;DP=2741;DP4=1230,1395,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00036483;MQB=2.30707e-09;MQSB=0.0871115;RPB=0.249816;SGB=43.0708;VDB=0.657642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.4:15113004 chr04:015113004 0 W/15113004-15113004 FN1655-S Single Base Substitution C-T INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2462.SNP.4:15128357 chr04:015128357 0 W/15128357-15128357 FN2462 SNP C -> A AC=1;AN=200;BQB=0.286321;DP=4701;DP4=2266,2066,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212721;MQB=1.22871e-05;MQSB=0.19891;RPB=0.98352;SGB=-15.5309;VDB=0.570811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.4:15129469 chr04:015129469 0 W/15129469-15129469 FN1426-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN901-S.SNP.4:15142001 chr04:015142001 0 W/15142001-15142001 FN901-S Single Base Substitution T-A INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2359.SNP.4:15145849 chr04:015145849 0 W/15145849-15145849 FN2359 SNP G -> C AC=2;AN=192;BQB=0.75303;DP=4630;DP4=2000,2278,21,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.2148e-17;MQSB=0.0269119;RPB=0.15804;SGB=38.6418;VDB=0.440938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V815L|903|LOC_Os04g26030|protein_coding|CODING|LOC_Os04g26030.1|3|1) FN2179-S.SNP.4:15147612 chr04:015147612 0 W/15147612-15147612 FN2179-S SNP G -> T AC=1;AN=168;BQB=0.00882351;DP=4539;DP4=2657,1834,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.195197;MQB=0.0936338;MQSB=0.952243;RPB=0.110593;SGB=-270.463;VDB=0.325146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.4:15147868 chr04:015147868 0 W/15147868-15147868 FN1639-S Single Base Substitution T-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3840-S.SNP.4:15148135 chr04:015148135 0 W/15148135-15148135 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.975639;DP=3115;DP4=1510,1522,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0410915;MQB=0.0333818;MQSB=1.80309e-17;RPB=0.976824;SGB=53.6492;VDB=0.496021;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.4:15149201 chr04:015149201 0 W/15149201-15149201 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.520547;DP=5413;DP4=2861,2314,19,14;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.33124;MQB=0.193989;MQSB=0;RPB=0.139093;SGB=33.5675;VDB=0.763231;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F733|915|LOC_Os04g26040|protein_coding|CODING|LOC_Os04g26040.1|1|1) FN4020-S.SNP.4:15152519 chr04:015152519 0 W/15152519-15152519 FN4020-S SNP A -> T AC=1;AN=168;BQB=0.879128;DP=2021;DP4=1199,724,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.68653e-10;MQSB=0.100167;RPB=0.865338;SGB=58.7637;VDB=0.519852;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.4:15167383 chr04:015167383 0 W/15167383-15167383 FN321-S Single Base Substitution G-A INTRON HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. W554-1-1.SNP.4:15169618 chr04:015169618 0 W/15169618-15169618 W554-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1261-S.SNP.4:15173632 chr04:015173632 0 W/15173632-15173632 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1407-S.SNP.4:15174338 chr04:015174338 0 W/15174338-15174338 FN1407-S Single Base Substitution G-A INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2595-S.SNP.4:15175693 chr04:015175693 0 W/15175693-15175693 FN2595-S SNP G -> T AC=1;AN=198;BQB=0.97103;DP=3986;DP4=1830,1910,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00451581;MQB=3.33849e-10;MQSB=2.7643e-05;RPB=0.999475;SGB=79.6954;VDB=0.497725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.4:15175876 chr04:015175876 0 W/15175876-15175876 FN2229-S SNP C -> T AC=1;AN=190;BQB=0.898831;DP=5016;DP4=2344,2272,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000797448;MQB=4.4762e-09;MQSB=0.948448;RPB=0.822813;SGB=-14.3297;VDB=0.515604;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.4:15176071 chr04:015176071 0 W/15176071-15176071 FN_772-3-1 Single Base Substitution G-C HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1268-S.SNP.4:15177034 chr04:015177034 0 W/15177034-15177034 FN1268-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN-287.SNP.4:15181030 chr04:015181030 0 W/15181030-15181030 FN-287 Single Base Substitution C-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN-67.SNP.4:15181914 chr04:015181914 0 W/15181914-15181914 FN-67 Single Base Substitution A-C INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN3356-S.SNP.4:15189277 chr04:015189277 0 W/15189277-15189277 FN3356-S SNP C -> G AC=1;AN=184;BQB=0.948913;DP=3181;DP4=1138,1755,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0028293;MQB=4.15643e-06;MQSB=0.747328;RPB=0.701928;SGB=-16.8012;VDB=0.413129;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.4:15193075 chr04:015193075 0 W/15193075-15193075 FN908-S Single Base Substitution A-C INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2299.SNP.4:15194640 chr04:015194640 0 W/15194640-15194640 FN2299 SNP C -> T AC=2;AN=192;BQB=0.523278;DP=5275;DP4=2394,2630,17,18;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.0394313;MQB=4.77803e-09;MQSB=0.000417143;RPB=0.982048;SGB=75.0722;VDB=0.0169417;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.4:15199490 chr04:015199490 0 W/15199490-15199490 FN4138-S SNP T -> C AC=1;AN=170;BQB=0.980401;DP=2410;DP4=1039,1291,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00912863;MQB=1.73551e-05;MQSB=0.264763;RPB=0.962006;SGB=12.556;VDB=0.820411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.4:15203748 chr04:015203748 0 W/15203748-15203748 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.757375;DP=3819;DP4=1619,1381,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00471328;MQB=0.000508082;MQSB=0.00153344;RPB=0.847399;SGB=71.3514;VDB=0.112983;EFF=INTRON(MODIFIER||||118|LOC_Os04g26110|protein_coding|CODING|LOC_Os04g26110.1|1|1) FN3594-S.SNP.4:15208581 chr04:015208581 0 W/15208581-15208581 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.920725;DP=2454;DP4=1081,1297,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55599e-10;MQSB=0.886765;RPB=0.836343;SGB=46.6141;VDB=0.135499;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.4:15208594 chr04:015208594 0 W/15208594-15208594 FN4304-S SNP A -> G AC=1;AN=170;BQB=0.98608;DP=2380;DP4=1109,1218,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.7609e-07;MQSB=0.999007;RPB=0.702;SGB=27.9928;VDB=0.489965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.4:15209807 chr04:015209807 0 W/15209807-15209807 FN2359 SNP T -> A AC=2;AN=192;BQB=0.561295;DP=5402;DP4=2586,2535,22,16;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.0181414;MQB=5.82428e-15;MQSB=1.34759e-09;RPB=0.920022;SGB=167.883;VDB=0.994412;EFF=INTRON(MODIFIER||||441|LOC_Os04g26120|protein_coding|CODING|LOC_Os04g26120.1|7|1) FN2432.SNP.4:15217917 chr04:015217917 0 W/15217917-15217917 FN2432 SNP A -> G AC=2;AN=200;BQB=0.985102;DP=3509;DP4=1051,2221,13,20;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0279282;MQB=0.800941;MQSB=0.376734;RPB=0.396373;SGB=146.368;VDB=0.365181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.4:15222552 chr04:015222552 0 W/15222552-15222552 FN1721-S SNP G -> A AC=1;AN=188;BQB=0.1892;DP=3964;DP4=1926,1970,21,27;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.137992;MQB=0.757085;MQSB=0;RPB=0.0123832;SGB=-155.228;VDB=0.71066;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.4:15230251 chr04:015230251 0 W/15230251-15230251 FN990-S Single Base Substitution C-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-183.SNP.4:15230289 chr04:015230289 0 W/15230289-15230289 FN-183 Single Base Substitution G-A INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN4143-S.SNP.4:15230435 chr04:015230435 0 W/15230435-15230435 FN4143-S SNP C -> G AC=1;AN=170;BQB=0.93521;DP=2646;DP4=1372,1190,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00302343;MQB=0.00222384;MQSB=0.297467;RPB=0.875417;SGB=30.1021;VDB=0.283405;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.4:15234418 chr04:015234418 0 W/15234418-15234418 FN400-S Single Base Substitution G-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN-304.SNP.4:15236262 chr04:015236262 0 W/15236262-15236262 FN-304 Single Base Substitution T-G INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN2492.SNP.4:15238392 chr04:015238392 0 W/15238392-15238392 FN2492 SNP T -> C AC=2;AN=200;BQB=0.635845;DP=5020;DP4=2106,2614,12,15;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00378486;MQB=6.10975e-11;MQSB=2.19029e-06;RPB=0.44566;SGB=118.737;VDB=0.933346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.4:15242428 chr04:015242428 0 W/15242428-15242428 FN1516-S Single Base Substitution T-G INTRON Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN524-S.SNP.4:15242775 chr04:015242775 0 W/15242775-15242775 FN524-S Single Base Substitution G-A INTRON HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2200-S.SNP.4:15247831 chr04:015247831 0 W/15247831-15247831 FN2200-S SNP G -> T AC=1;AN=190;BQB=0.93161;DP=1935;DP4=1111,516,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.198966;MQB=0.0224175;MQSB=0;RPB=0.0698614;SGB=28.9929;VDB=0.668533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W1447C|1663|LOC_Os04g26140|protein_coding|CODING|LOC_Os04g26140.1|4|1) FN3556-S.SNP.4:15251205 chr04:015251205 0 W/15251205-15251205 FN3556-S SNP G -> A AC=2;AN=188;BQB=0.971963;DP=2589;DP4=1434,1086,19,20;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0135187;MQB=0.0446074;MQSB=0;RPB=0.235278;SGB=128.11;VDB=0.492509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.4:15255276 chr04:015255276 0 W/15255276-15255276 FN3532-S SNP A -> C AC=2;AN=188;BQB=0.901344;DP=2596;DP4=1307,1170,17,10;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00808937;MQB=1.52711e-12;MQSB=0.117502;RPB=0.136089;SGB=117.128;VDB=0.0122087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.4:15255278 chr04:015255278 0 W/15255278-15255278 FN3532-S SNP T -> A AC=2;AN=188;BQB=0.997231;DP=2616;DP4=1330,1147,18,11;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00802752;MQB=5.73806e-13;MQSB=0.22958;RPB=0.157988;SGB=92.677;VDB=0.0189966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.4:15255284 chr04:015255284 0 W/15255284-15255284 FN3532-S SNP G -> T AC=1;AN=188;BQB=0.856164;DP=2607;DP4=1384,1115,18,11;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00805524;MQB=7.71922e-13;MQSB=0.243881;RPB=0.191152;SGB=92.677;VDB=0.237596;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.4:15258737 chr04:015258737 0 W/15258737-15258737 FN769-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g26160 hypothetical protein SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. W470-2-1.SNP.4:15265140 chr04:015265140 0 W/15265140-15265140 W470-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g26180 hypothetical protein SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN443-S.SNP.4:15265270 chr04:015265270 0 W/15265270-15265270 FN443-S Single Base Substitution T-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. W470-2-1.SNP.4:15268784 chr04:015268784 0 W/15268784-15268784 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2655-S.SNP.4:15274455 chr04:015274455 0 W/15274455-15274455 FN2655-S SNP C -> G AC=1;AN=200;BQB=0.832564;DP=4673;DP4=1949,2357,10,19;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0173336;MQB=3.34674e-09;MQSB=0.0592561;RPB=0.176464;SGB=-40.0535;VDB=0.542218;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.4:15280456 chr04:015280456 0 W/15280456-15280456 FN-70 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN3792-S.SNP.4:15290429 chr04:015290429 0 W/15290429-15290429 FN3792-S SNP T -> C AC=2;AN=190;BQB=0.952115;DP=2527;DP4=1123,1305,10,17;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00633162;MQB=3.91996e-05;MQSB=0.435437;RPB=0.755875;SGB=54.3062;VDB=0.683615;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.4:15290461 chr04:015290461 0 W/15290461-15290461 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1351-S.SNP.4:15292762 chr04:015292762 0 W/15292762-15292762 FN1351-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3455-S.SNP.4:15302240 chr04:015302240 0 W/15302240-15302240 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.781479;DP=3065;DP4=1332,1630,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.85621e-05;MQSB=0.442117;RPB=0.703959;SGB=28.7043;VDB=0.715037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.4:15306175 chr04:015306175 0 W/15306175-15306175 FN2577-S SNP A -> T AC=1;AN=198;BQB=0.896053;DP=3876;DP4=1691,1986,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000257998;MQB=3.31367e-06;MQSB=0.11445;RPB=0.588068;SGB=40.3588;VDB=0.121318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.4:15307503 chr04:015307503 0 W/15307503-15307503 FN2742-S SNP C -> T AC=1;AN=200;BQB=0.65823;DP=4621;DP4=2263,2091,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51461e-09;MQSB=0.958288;RPB=0.905101;SGB=54.6902;VDB=0.0987849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.4:15314921 chr04:015314921 0 W/15314921-15314921 FN2639-S SNP A -> G AC=1;AN=200;BQB=0.95742;DP=4492;DP4=1857,2279,6,13;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.09439;MQB=0.712275;MQSB=0.399664;RPB=0.0185822;SGB=34.6953;VDB=0.525933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W63R|301|LOC_Os04g26260|protein_coding|CODING|LOC_Os04g26260.1|3|1) FN2628-S.SNP.4:15324068 chr04:015324068 0 W/15324068-15324068 FN2628-S SNP T -> G AC=1;AN=200;BQB=0.975007;DP=4842;DP4=2274,2337,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00640231;MQB=2.93693e-15;MQSB=0.409466;RPB=0.636899;SGB=27.1468;VDB=0.17318;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Ccg|T995P|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1) FN2542-S.SNP.4:15324557 chr04:015324557 0 W/15324557-15324557 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.228404;DP=4520;DP4=2224,2087,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0362832;MQB=0.22161;MQSB=0.00389649;RPB=0.926646;SGB=31.9395;VDB=0.116656;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A832S|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1) FN715-S.SNP.4:15325068 chr04:015325068 0 W/15325068-15325068 FN715-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN-299.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN-299 Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-315.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN-315 Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN-387 Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-66.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN-66 Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1089-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN1089-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2658-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN2658-S SNP C -> A AC=2;AN=200;BQB=0.979277;DP=6468;DP4=3032,3047,17,27;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.07282;MQB=5.78887e-05;MQSB=0.00167795;RPB=0.344227;SGB=99.8245;VDB=0.746671;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN3376-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN3376-S SNP C -> A AC=1;AN=184;BQB=0.99593;DP=3751;DP4=1716,1874,26,28;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0813117;MQB=6.79934e-07;MQSB=0.00180904;RPB=0.794957;SGB=180.141;VDB=0.77517;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN347-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN347-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3599-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN3599-S SNP C -> A AC=2;AN=188;BQB=0.948671;DP=3579;DP4=1636,1825,21,21;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0807488;MQB=2.07465e-05;MQSB=0.00338183;RPB=0.963426;SGB=185.278;VDB=0.477669;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN3766-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN3766-S SNP C -> A AC=2;AN=190;BQB=0.999143;DP=3453;DP4=1570,1765,13,18;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0831161;MQB=0.000271022;MQSB=0.00936247;RPB=0.872162;SGB=100.07;VDB=0.114112;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN3897-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN3897-S SNP C -> A AC=1;AN=158;BQB=0.7769;DP=3179;DP4=1461,1573,13,26;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0855615;MQB=0.000290697;MQSB=4.9497e-05;RPB=0.681113;SGB=165.042;VDB=0.418215;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN4176-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN4176-S SNP C -> A AC=1;AN=170;BQB=0.858047;DP=3420;DP4=1625,1708,11,13;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0891813;MQB=0.00277298;MQSB=0.0196786;RPB=0.762991;SGB=72.7472;VDB=0.30517;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E610*|1539|LOC_Os04g26290|protein_coding|CODING|LOC_Os04g26290.1|3|1);LOF=(LOC_Os04g26290|LOC_Os04g26290|1|1.00);NMD=(LOC_Os04g26290|LOC_Os04g26290|1|1.00) FN474-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN474-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN696-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN768-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN768-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN874-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN874-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN949-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN975-S Single Base Substitution C-A STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.4:15325223 chr04:015325223 0 W/15325223-15325223 FN_935-1 Single Base Substitution C-A HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3469-S.SNP.4:15329958 chr04:015329958 0 W/15329958-15329958 FN3469-S SNP G -> A AC=1;AN=184;BQB=0.999992;DP=3546;DP4=1770,1649,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.24614e-07;MQSB=0.586096;RPB=0.999939;SGB=53.2642;VDB=0.415366;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.4:15334675 chr04:015334675 0 W/15334675-15334675 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.938711;DP=3030;DP4=1572,1353,11,8;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0240924;MQB=0.079753;MQSB=1.1399e-09;RPB=0.961673;SGB=56.6929;VDB=0.961435;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T586|958|LOC_Os04g26300|protein_coding|CODING|LOC_Os04g26300.1|2|1) FN3506-S.SNP.4:15336951 chr04:015336951 0 W/15336951-15336951 FN3506-S SNP G -> A AC=2;AN=188;BQB=0.982522;DP=2292;DP4=1376,796,20,10;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0122164;MQB=9.14326e-09;MQSB=0.648508;RPB=0.747445;SGB=61.6823;VDB=0.189646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.4:15343926 chr04:015343926 0 W/15343926-15343926 FN-155 Single Base Substitution C-T INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1350-S.SNP.4:15344004 chr04:015344004 0 W/15344004-15344004 FN1350-S Single Base Substitution G-C INTRON HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN2266-S.SNP.4:15344004 chr04:015344004 0 W/15344004-15344004 FN2266-S SNP G -> C AC=2;AN=190;BQB=0.771205;DP=4711;DP4=1962,2181,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.54838e-16;MQSB=0.972211;RPB=0.838391;SGB=-6.57546;VDB=0.862423;EFF=INTRON(MODIFIER||||331|LOC_Os04g26320|protein_coding|CODING|LOC_Os04g26320.1|3|1) FN917-S.SNP.4:15345080 chr04:015345080 0 W/15345080-15345080 FN917-S Single Base Substitution G-A INTRON HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN917-S.SNP.4:15345081 chr04:015345081 0 W/15345081-15345081 FN917-S Single Base Substitution A-T INTRON HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3806-S.SNP.4:15345148 chr04:015345148 0 W/15345148-15345148 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.941507;DP=2463;DP4=1287,1073,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.88509e-07;MQSB=0.991915;RPB=0.980548;SGB=44.5415;VDB=0.423273;EFF=INTRON(MODIFIER||||331|LOC_Os04g26320|protein_coding|CODING|LOC_Os04g26320.1|2|1) FN2274-S.SNP.4:15346902 chr04:015346902 0 W/15346902-15346902 FN2274-S SNP G -> C AC=1;AN=190;BQB=0.96138;DP=4528;DP4=1991,2173,13,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05824e-15;MQSB=0.974949;RPB=0.996055;SGB=74.7373;VDB=0.764029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.4:15349113 chr04:015349113 0 W/15349113-15349113 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.834094;DP=2265;DP4=905,1252,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00838852;MQB=2.9781e-05;MQSB=0.895486;RPB=0.834881;SGB=64.5316;VDB=0.976835;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.4:15356799 chr04:015356799 0 W/15356799-15356799 FN4279-S SNP G -> T AC=2;AN=170;BQB=0.991839;DP=2606;DP4=1166,1351,12,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.79965e-15;MQSB=0.989274;RPB=0.98738;SGB=76.1898;VDB=0.487762;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.4:15357982 chr04:015357982 0 W/15357982-15357982 FN-345 Single Base Substitution C-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-345.SNP.4:15357983 chr04:015357983 0 W/15357983-15357983 FN-345 Single Base Substitution C-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-158.SNP.4:15359694 chr04:015359694 0 W/15359694-15359694 FN-158 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g26340 retrotransposon protein, putative, unclassified, expressed SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN2555-S.SNP.4:15362708 chr04:015362708 0 W/15362708-15362708 FN2555-S SNP G -> T AC=1;AN=198;BQB=0.972853;DP=4214;DP4=2108,1923,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.40693e-12;MQSB=0.707508;RPB=0.971405;SGB=90.9049;VDB=0.87627;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D548Y|882|LOC_Os04g26340|protein_coding|CODING|LOC_Os04g26340.1|6|1) FN2638-S.SNP.4:15364896 chr04:015364896 0 W/15364896-15364896 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.78478;DP=4842;DP4=2399,2205,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206526;MQB=3.64029e-11;MQSB=0.786147;RPB=0.83698;SGB=86.5007;VDB=0.530999;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.4:15365769 chr04:015365769 0 W/15365769-15365769 FN-370 Single Base Substitution C-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2479.SNP.4:15368376 chr04:015368376 0 W/15368376-15368376 FN2479 SNP A -> G AC=1;AN=200;BQB=0.640483;DP=5400;DP4=2821,2151,9,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000925926;MQB=1.01583e-10;MQSB=0.00162285;RPB=0.0835226;SGB=79.9264;VDB=0.121215;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.4:15375532 chr04:015375532 0 W/15375532-15375532 FN467-S Single Base Substitution G-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN-290.SNP.4:15375698 chr04:015375698 0 W/15375698-15375698 FN-290 Single Base Substitution T-G INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2584-S.SNP.4:15375903 chr04:015375903 0 W/15375903-15375903 FN2584-S SNP G -> T AC=1;AN=198;BQB=0.998982;DP=3872;DP4=1739,1860,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0557851;MQB=0.280964;MQSB=2.06367e-15;RPB=0.559052;SGB=52.7004;VDB=0.778695;EFF=INTERGENIC(MODIFIER||||||||||1) FN4084-S.SNP.4:15377109 chr04:015377109 0 W/15377109-15377109 FN4084-S SNP G -> T AC=1;AN=182;BQB=0.974313;DP=3220;DP4=1536,1617,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.0745342;MQB=0.169126;MQSB=0.000270235;RPB=0.932644;SGB=44.1115;VDB=0.249966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.4:15383769 chr04:015383769 0 W/15383769-15383769 FN1237-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN4101-S.SNP.4:15385419 chr04:015385419 0 W/15385419-15385419 FN4101-S SNP C -> A AC=1;AN=182;BQB=0.643543;DP=2973;DP4=1388,1493,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.0016818;MQB=0.00635659;MQSB=0.840136;RPB=0.96758;SGB=39.6007;VDB=0.10087;EFF=INTRON(MODIFIER||||324|LOC_Os04g26370|protein_coding|CODING|LOC_Os04g26370.1|2|1) FN-187.SNP.4:15387551 chr04:015387551 0 W/15387551-15387551 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2540-S.SNP.4:15388901 chr04:015388901 0 W/15388901-15388901 FN2540-S SNP A -> T AC=1;AN=198;BQB=0.88495;DP=4151;DP4=2007,1908,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.57103e-14;MQSB=0.975366;RPB=0.998363;SGB=22.1104;VDB=0.296108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S77T|137|LOC_Os04g26380|protein_coding|CODING|LOC_Os04g26380.1|1|1) FN629-S.SNP.4:15389784 chr04:015389784 0 W/15389784-15389784 FN629-S Single Base Substitution C-T INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2140-S.SNP.4:15397422 chr04:015397422 0 W/15397422-15397422 FN2140-S SNP T -> G AC=2;AN=168;BQB=0.940224;DP=4266;DP4=2075,2108,34,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.15071e-32;MQSB=0.985789;RPB=0.752525;SGB=74.3007;VDB=0.611835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E37A|222|LOC_Os04g26400|protein_coding|CODING|LOC_Os04g26400.1|3|1),SPLICE_SITE_REGION(LOW||||222|LOC_Os04g26400|protein_coding|CODING|LOC_Os04g26400.1|3|1) FN3464-S.SNP.4:15399080 chr04:015399080 0 W/15399080-15399080 FN3464-S SNP C -> G AC=2;AN=184;BQB=0.955498;DP=2724;DP4=1274,1334,13,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.7504e-10;MQSB=0.9859;RPB=0.915326;SGB=84.9167;VDB=0.886317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.4:15399843 chr04:015399843 0 W/15399843-15399843 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.786512;DP=4214;DP4=1775,2184,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.94474e-12;MQSB=0.976874;RPB=0.407391;SGB=72.7161;VDB=0.645175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.4:15404558 chr04:015404558 0 W/15404558-15404558 FN1685-S SNP A -> G AC=1;AN=188;BQB=0.995825;DP=3291;DP4=1596,1675,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.141294;MQB=0.125067;MQSB=1.71427e-35;RPB=0.16676;SGB=53.7007;VDB=0.13437;EFF=INTRON(MODIFIER||||341|LOC_Os04g26420|protein_coding|CODING|LOC_Os04g26420.1|1|1) FN4100-S.SNP.4:15413829 chr04:015413829 0 W/15413829-15413829 FN4100-S SNP T -> G AC=1;AN=182;BQB=0.631983;DP=3161;DP4=1182,1807,6,24;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.46473e-12;MQSB=0.873514;RPB=0.889628;SGB=26.3016;VDB=0.781681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.4:15414853 chr04:015414853 0 W/15414853-15414853 FN2275-S SNP T -> C AC=1;AN=190;BQB=0.956723;DP=5060;DP4=2604,2118,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.42552e-11;MQSB=0.999305;RPB=0.720546;SGB=50.3161;VDB=0.887017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.4:15419912 chr04:015419912 0 W/15419912-15419912 FN3529-S SNP C -> G AC=2;AN=188;BQB=0.98571;DP=2288;DP4=1243,984,7,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.4717e-07;MQSB=0.0473771;RPB=0.951977;SGB=53.5223;VDB=0.903497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.4:15423995 chr04:015423995 0 W/15423995-15423995 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.999948;DP=2569;DP4=1333,1167,11,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.73165e-11;MQSB=0.950365;RPB=0.270873;SGB=45.206;VDB=0.449535;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.4:15423997 chr04:015423997 0 W/15423997-15423997 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.907284;DP=2540;DP4=1307,1159,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.4713e-10;MQSB=0.94149;RPB=0.411812;SGB=48.6486;VDB=0.317573;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.4:15425357 chr04:015425357 0 W/15425357-15425357 FN343-S Single Base Substitution C-T INTRON HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3708-S.SNP.4:15426117 chr04:015426117 0 W/15426117-15426117 FN3708-S SNP G -> A AC=1;AN=190;BQB=0.792973;DP=2575;DP4=1163,1334,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000122296;MQSB=0.984781;RPB=0.481352;SGB=39.9877;VDB=0.772968;EFF=INTRON(MODIFIER||||191|LOC_Os04g26440|protein_coding|CODING|LOC_Os04g26440.1|3|1) FN2320.SNP.4:15429745 chr04:015429745 0 W/15429745-15429745 FN2320 SNP C -> T AC=1;AN=192;BQB=0.749403;DP=4721;DP4=2142,2230,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.12885e-06;MQSB=0.741805;RPB=0.873995;SGB=36.2157;VDB=0.697825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.4:15431933 chr04:015431933 0 W/15431933-15431933 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.700587;DP=4550;DP4=2066,2205,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.91767e-05;MQSB=0.802465;RPB=0.830157;SGB=13.8539;VDB=0.147453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.4:15433976 chr04:015433976 0 W/15433976-15433976 FN3462-S SNP G -> T AC=1;AN=184;BQB=0.441614;DP=2445;DP4=1524,810,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000408998;MQB=2.74658e-05;MQSB=0.807164;RPB=0.555008;SGB=25.1826;VDB=0.160844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.4:15434304 chr04:015434304 0 W/15434304-15434304 FN2620-S SNP T -> G AC=1;AN=198;BQB=0.468612;DP=4028;DP4=2196,1597,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22946e-12;MQSB=0.447143;RPB=0.309857;SGB=95.5;VDB=0.408714;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.4:15446326 chr04:015446326 0 W/15446326-15446326 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.933398;DP=2409;DP4=1228,1103,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.37154e-05;MQSB=0.933992;RPB=0.3578;SGB=30.1021;VDB=0.732531;EFF=UTR_3_PRIME(MODIFIER||1282||102|LOC_Os04g26490|protein_coding|CODING|LOC_Os04g26490.1|2|1) FN_846-8-1.SNP.4:15447608 chr04:015447608 0 W/15447608-15447608 FN_846-8-1 Single Base Substitution C-T Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN555-S.SNP.4:15448152 chr04:015448152 0 W/15448152-15448152 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2478.SNP.4:15449110 chr04:015449110 0 W/15449110-15449110 FN2478 SNP G -> T AC=2;AN=200;BQB=0.52595;DP=4092;DP4=1846,1930,17,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.38029e-18;MQSB=0.98734;RPB=0.859;SGB=0.203511;VDB=0.957279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-80.SNP.4:15452260 chr04:015452260 0 W/15452260-15452260 FN-80 Single Base Substitution G-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN-80.SNP.4:15452265 chr04:015452265 0 W/15452265-15452265 FN-80 Single Base Substitution A-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN-305.SNP.4:15457824 chr04:015457824 0 W/15457824-15457824 FN-305 Single Base Substitution A-C INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1371-S.SNP.4:15463632 chr04:015463632 0 W/15463632-15463632 FN1371-S Single Base Substitution G-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3849-S.SNP.4:15467047 chr04:015467047 0 W/15467047-15467047 FN3849-S SNP A -> C AC=2;AN=158;BQB=0.894122;DP=2584;DP4=1358,1079,15,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.33247e-19;MQSB=0.918317;RPB=0.609581;SGB=-8.4102;VDB=0.446562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.4:15468028 chr04:015468028 0 W/15468028-15468028 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.783282;DP=4512;DP4=2390,1836,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.88265e-10;MQSB=0.951171;RPB=0.780349;SGB=11.0951;VDB=0.643793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.4:15468649 chr04:015468649 0 W/15468649-15468649 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.999002;DP=3094;DP4=1326,1495,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.43867e-05;MQSB=7.61753e-06;RPB=0.992422;SGB=67.9293;VDB=0.596623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.4:15471100 chr04:015471100 0 W/15471100-15471100 FN3932-S SNP G -> A AC=1;AN=158;BQB=0.999896;DP=2175;DP4=1201,875,10,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.41767e-06;MQSB=0.91884;RPB=0.867575;SGB=47.0672;VDB=0.838507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.4:15472780 chr04:015472780 0 W/15472780-15472780 FN1256-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1532-S.SNP.4:15474883 chr04:015474883 0 W/15474883-15474883 FN1532-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g26530 retrotransposon protein, putative, LINE subclass, expressed SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2265-S.SNP.4:15476738 chr04:015476738 0 W/15476738-15476738 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.231273;DP=4917;DP4=2450,2062,24,14;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.199105;MQB=0.696233;MQSB=1.36283e-24;RPB=0.104608;SGB=-428.184;VDB=0.0357501;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.4:15478878 chr04:015478878 0 W/15478878-15478878 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.989619;DP=2518;DP4=1265,1192,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00317712;MQB=8.22151e-05;MQSB=0.179328;RPB=0.812231;SGB=52.3148;VDB=0.606925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.4:15479105 chr04:015479105 0 W/15479105-15479105 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.0183843;DP=5226;DP4=2445,2394,66,15;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.112323;MQB=1.23984e-17;MQSB=0;RPB=0.00482076;SGB=-1426.65;VDB=0.682255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.4:15482420 chr04:015482420 0 W/15482420-15482420 FN2312 SNP G -> A AC=2;AN=192;BQB=0.838361;DP=4700;DP4=2410,2009,33,21;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.0112766;MQB=6.73113e-13;MQSB=0.501075;RPB=0.682493;SGB=182.354;VDB=0.637266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.4:15483111 chr04:015483111 0 W/15483111-15483111 FN2205-S SNP C -> T AC=2;AN=190;BQB=0.600411;DP=4302;DP4=2112,1929,19,27;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0560205;MQB=0.518211;MQSB=1.21992e-08;RPB=0.164559;SGB=153.378;VDB=0.167561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.4:15483799 chr04:015483799 0 W/15483799-15483799 FN2109-S SNP C -> T AC=2;AN=168;BQB=0.765313;DP=3066;DP4=1481,1531,23,20;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=5.63219e-15;MQSB=7.82037e-06;RPB=0.202911;SGB=42.8227;VDB=0.841467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.4:15485673 chr04:015485673 0 W/15485673-15485673 FN2486 SNP G -> A AC=2;AN=200;BQB=0.987177;DP=4705;DP4=2230,2182,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00021254;MQB=1.10197e-25;MQSB=0.902478;RPB=0.941033;SGB=162.845;VDB=0.565617;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.4:15490849 chr04:015490849 0 W/15490849-15490849 FN2164-S SNP A -> T AC=2;AN=168;BQB=0.978692;DP=4091;DP4=2095,1930,29,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00391102;MQB=8.90754e-28;MQSB=0.000297149;RPB=0.0433463;SGB=1.86015;VDB=0.0238044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.4:15491741 chr04:015491741 0 W/15491741-15491741 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.99576;DP=2390;DP4=1135,1154,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.83342e-11;MQSB=0.965777;RPB=0.857575;SGB=31.3213;VDB=0.384573;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.4:15496832 chr04:015496832 0 W/15496832-15496832 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.502135;DP=4595;DP4=1984,2192,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000870511;MQB=3.92316e-09;MQSB=0.703469;RPB=0.412412;SGB=-36.6405;VDB=0.324266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.4:15498225 chr04:015498225 0 W/15498225-15498225 FN3448-S SNP T -> C AC=1;AN=184;BQB=0.797892;DP=2865;DP4=1274,1482,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000169492;MQSB=0.890752;RPB=1;SGB=25.1826;VDB=0.165106;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.4:15501105 chr04:015501105 0 W/15501105-15501105 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2310.SNP.4:15502651 chr04:015502651 0 W/15502651-15502651 FN2310 SNP C -> A AC=1;AN=192;BQB=0.908471;DP=4994;DP4=2659,2017,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.24776e-20;MQSB=0.87932;RPB=0.925181;SGB=35.5131;VDB=0.740341;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.4:15502996 chr04:015502996 0 W/15502996-15502996 FN-312 Single Base Substitution G-A INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN906-S.SNP.4:15504068 chr04:015504068 0 W/15504068-15504068 FN906-S Single Base Substitution C-G INTRON HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN3824-S.SNP.4:15513777 chr04:015513777 0 W/15513777-15513777 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.969037;DP=3380;DP4=1474,1798,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59472e-11;MQSB=0.986107;RPB=0.245372;SGB=53.8699;VDB=0.788648;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A232S|722|LOC_Os04g26580|protein_coding|CODING|LOC_Os04g26580.1|2|1) FN3806-S.SNP.4:15513865 chr04:015513865 0 W/15513865-15513865 FN3806-S SNP G -> A AC=2;AN=190;BQB=0.66396;DP=3406;DP4=1471,1786,29,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.56783e-22;MQSB=0.752777;RPB=0.310344;SGB=160.486;VDB=0.0789731;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G202|722|LOC_Os04g26580|protein_coding|CODING|LOC_Os04g26580.1|2|1) FN924-S.SNP.4:15514881 chr04:015514881 0 W/15514881-15514881 FN924-S Single Base Substitution C-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN1069-S.SNP.4:15515901 chr04:015515901 0 W/15515901-15515901 FN1069-S Single Base Substitution G-A INTRON HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2345.SNP.4:15520020 chr04:015520020 0 W/15520020-15520020 FN2345 SNP C -> A AC=1;AN=192;BQB=0.398596;DP=4597;DP4=2180,2122,27,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.85122e-23;MQSB=0.489767;RPB=0.980071;SGB=51.1566;VDB=0.805377;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.4:15520306 chr04:015520306 0 W/15520306-15520306 FN807-S Single Base Substitution C-T INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1106-S.SNP.4:15520723 chr04:015520723 0 W/15520723-15520723 FN1106-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g26600 expressed protein SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1286-S.SNP.4:15521128 chr04:015521128 0 W/15521128-15521128 FN1286-S Single Base Substitution C-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1464-S.SNP.4:15524063 chr04:015524063 0 W/15524063-15524063 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2676-S.SNP.4:15524515 chr04:015524515 0 W/15524515-15524515 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.449308;DP=4947;DP4=2537,2201,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77029e-08;MQSB=0.960614;RPB=0.925812;SGB=32.0901;VDB=0.768444;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.4:15524837 chr04:015524837 0 W/15524837-15524837 FN-35 Single Base Substitution T-C INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1424-S.SNP.4:15526245 chr04:015526245 0 W/15526245-15526245 FN1424-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN495-S.SNP.4:15526245 chr04:015526245 0 W/15526245-15526245 FN495-S Single Base Substitution G-A INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN927-S.SNP.4:15526245 chr04:015526245 0 W/15526245-15526245 FN927-S Single Base Substitution G-A INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN3370-S.SNP.4:15526468 chr04:015526468 0 W/15526468-15526468 FN3370-S SNP C -> T AC=1;AN=184;BQB=0.984865;DP=2857;DP4=1253,1529,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53971e-06;MQSB=0.998682;RPB=0.891338;SGB=32.2261;VDB=0.837681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2084-S.SNP.4:15526854 chr04:015526854 0 W/15526854-15526854 FN2084-S SNP C -> A AC=1;AN=168;BQB=0.928895;DP=1876;DP4=687,1153,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.77432e-08;MQSB=0.937744;RPB=0.986676;SGB=-15.3725;VDB=0.138282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.4:15527388 chr04:015527388 0 W/15527388-15527388 FN3283-S SNP G -> T AC=2;AN=184;BQB=0.960541;DP=3211;DP4=1626,1465,15,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.75003e-10;MQSB=0.58911;RPB=0.799404;SGB=67.4439;VDB=0.13466;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R49|157|LOC_Os04g26620|protein_coding|CODING|LOC_Os04g26620.1|1|1) FN1007-S.SNP.4:15535934 chr04:015535934 0 W/15535934-15535934 FN1007-S Single Base Substitution C-G INTRON HOMO SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2767-S.SNP.4:15538740 chr04:015538740 0 W/15538740-15538740 FN2767-S SNP G -> T AC=1;AN=198;BQB=0.99656;DP=4227;DP4=2112,1915,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31873e-09;MQSB=0.990403;RPB=0.90081;SGB=24.1541;VDB=0.500953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.4:15540237 chr04:015540237 0 W/15540237-15540237 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.98769;DP=4639;DP4=2279,2073,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11883e-10;MQSB=0.584802;RPB=0.800547;SGB=47.4799;VDB=0.522578;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.4:15542454 chr04:015542454 0 W/15542454-15542454 FN928-S Single Base Substitution C-T INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2274-S.SNP.4:15548564 chr04:015548564 0 W/15548564-15548564 FN2274-S SNP T -> A AC=1;AN=190;BQB=0.35675;DP=4831;DP4=2117,2293,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.25826e-13;MQSB=0.0309232;RPB=0.985643;SGB=96.5165;VDB=0.674903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.4:15781417 chr04:015781417 0 W/15781417-15781417 FN3417-S SNP C -> T AC=2;AN=184;BQB=0.994213;DP=3697;DP4=1435,2149,13,13;HOB=0.0215028;ICB=0.494625;MQ=16;MQ0F=0.390046;MQB=0.104856;MQSB=1.92487e-07;RPB=0.135831;SGB=81.5311;VDB=0.575105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.4:15822371 chr04:015822371 0 W/15822371-15822371 FN2480 SNP G -> A AC=1;AN=200;BQB=0.96806;DP=4764;DP4=2244,2228,9,9;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.172544;MQB=0.0548543;MQSB=0.0920731;RPB=0.906169;SGB=32.0901;VDB=0.050579;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.4:15863322 chr04:015863322 0 W/15863322-15863322 FN_798-4-2 Single Base Substitution G-T HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN-167.SNP.4:15863762 chr04:015863762 0 W/15863762-15863762 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1154-S.SNP.4:15869819 chr04:015869819 0 W/15869819-15869819 FN1154-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN3811-S.SNP.4:15872780 chr04:015872780 0 W/15872780-15872780 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.793048;DP=2616;DP4=1324,1207,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.43355e-07;MQSB=0.995485;RPB=0.824081;SGB=49.0954;VDB=0.750182;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V677|734|LOC_Os04g26841|protein_coding|CODING|LOC_Os04g26841.1|16|1) FN3377-S.SNP.4:15874050 chr04:015874050 0 W/15874050-15874050 FN3377-S SNP G -> T AC=1;AN=184;BQB=0.991356;DP=2731;DP4=1435,1202,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.52194e-06;MQSB=0.968814;RPB=0.746897;SGB=35.1773;VDB=0.925301;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.4:15882627 chr04:015882627 0 W/15882627-15882627 FN919-S Single Base Substitution T-A INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2438.SNP.4:15884746 chr04:015884746 0 W/15884746-15884746 FN2438 SNP G -> A AC=1;AN=200;BQB=0.690266;DP=4978;DP4=2346,2237,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68333e-11;MQSB=0.776809;RPB=0.98745;SGB=-36.5;VDB=0.264846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2090-S.SNP.4:15901993 chr04:015901993 0 W/15901993-15901993 FN2090-S SNP G -> A AC=2;AN=168;BQB=0.730981;DP=2697;DP4=922,1693,20,26;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00852799;MQB=1.24524e-15;MQSB=0.993246;RPB=0.347761;SGB=-53.7345;VDB=0.585618;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D411|1517|LOC_Os04g26880|protein_coding|CODING|LOC_Os04g26880.1|3|1) FN2781-S.SNP.4:15903436 chr04:015903436 0 W/15903436-15903436 FN2781-S SNP T -> G AC=1;AN=198;BQB=0.788198;DP=4570;DP4=2308,2041,6,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00525164;MQB=1.99334e-10;MQSB=0.458439;RPB=0.61055;SGB=44.9151;VDB=0.657043;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acC|T86|1517|LOC_Os04g26880|protein_coding|CODING|LOC_Os04g26880.1|1|1) FN1762-S.SNP.4:15904245 chr04:015904245 0 W/15904245-15904245 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.94948;DP=2133;DP4=742,1355,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.76686e-05;MQSB=0.793567;RPB=0.691268;SGB=18.2682;VDB=0.188618;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.4:15915452 chr04:015915452 0 W/15915452-15915452 FN711-S Single Base Substitution T-C INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2080-S.SNP.4:15916543 chr04:015916543 0 W/15916543-15916543 FN2080-S SNP G -> C AC=1;AN=168;BQB=0.217324;DP=3560;DP4=2255,1250,20,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.1377e-15;MQSB=0.931026;RPB=0.898269;SGB=-46.9043;VDB=0.929508;EFF=INTRON(MODIFIER||||351|LOC_Os04g26910|protein_coding|CODING|LOC_Os04g26910.1|2|1) FN2676-S.SNP.4:15919382 chr04:015919382 0 W/15919382-15919382 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.432138;DP=4899;DP4=2419,2243,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.90724e-07;MQSB=0.985091;RPB=0.619001;SGB=16.4591;VDB=0.376268;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.4:15922120 chr04:015922120 0 W/15922120-15922120 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.705858;DP=2910;DP4=1474,1320,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26159e-08;MQSB=0.972871;RPB=0.991068;SGB=85.5263;VDB=0.36083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.4:15922993 chr04:015922993 0 W/15922993-15922993 FN2540-S SNP G -> T AC=1;AN=198;BQB=0.639195;DP=4248;DP4=2084,1907,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000235405;MQB=1.53564e-07;MQSB=0.980045;RPB=0.981192;SGB=16.3688;VDB=0.874935;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.4:15927341 chr04:015927341 0 W/15927341-15927341 FN3460-S SNP C -> T AC=2;AN=184;BQB=0.609673;DP=2658;DP4=1179,1379,9,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.09943e-08;MQSB=0.915031;RPB=0.999999;SGB=62.3078;VDB=0.250301;EFF=UTR_3_PRIME(MODIFIER||95||158|LOC_Os04g26920|protein_coding|CODING|LOC_Os04g26920.1|3|1),INTRON(MODIFIER||||189|LOC_Os04g26920|protein_coding|CODING|LOC_Os04g26920.2|4|1),INTRON(MODIFIER||||201|LOC_Os04g26920|protein_coding|CODING|LOC_Os04g26920.3|3|1) FN931-S.SNP.4:15928215 chr04:015928215 0 W/15928215-15928215 FN931-S Single Base Substitution C-G INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN701-S.SNP.4:15930417 chr04:015930417 0 W/15930417-15930417 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN4176-S.SNP.4:15937011 chr04:015937011 0 W/15937011-15937011 FN4176-S SNP A -> C AC=2;AN=170;BQB=0.647886;DP=2480;DP4=1246,1161,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.60481e-09;MQSB=0.976755;RPB=0.983409;SGB=65.8619;VDB=0.812071;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A117|135|LOC_Os04g26940|protein_coding|CODING|LOC_Os04g26940.1|2|1) FN3535-S.SNP.4:15937683 chr04:015937683 0 W/15937683-15937683 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.794755;DP=3541;DP4=1914,1569,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.57242e-07;MQSB=0.985528;RPB=0.998084;SGB=58.0655;VDB=0.688029;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q68|135|LOC_Os04g26940|protein_coding|CODING|LOC_Os04g26940.1|1|1) FN1652-S.SNP.4:15937864 chr04:015937864 0 W/15937864-15937864 FN1652-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g26940 retrotransposon protein, putative, unclassified SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN1742-S.SNP.4:15937864 chr04:015937864 0 W/15937864-15937864 FN1742-S SNP G -> A AC=1;AN=188;BQB=0.78933;DP=1489;DP4=693,742,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.42297e-08;MQSB=0.98261;RPB=0.856279;SGB=46.6141;VDB=0.728828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T8M|135|LOC_Os04g26940|protein_coding|CODING|LOC_Os04g26940.1|1|1) FN3569-S.SNP.4:15937864 chr04:015937864 0 W/15937864-15937864 FN3569-S SNP G -> A AC=1;AN=188;BQB=0.999954;DP=3289;DP4=2003,1184,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24468e-09;MQSB=0.934123;RPB=0.998359;SGB=71.6954;VDB=0.246622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T8M|135|LOC_Os04g26940|protein_coding|CODING|LOC_Os04g26940.1|1|1) FN3342-S.SNP.4:15940440 chr04:015940440 0 W/15940440-15940440 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.965525;DP=2976;DP4=1515,1178,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.93118e-06;MQSB=0.98893;RPB=0.994312;SGB=44.2207;VDB=0.861107;EFF=INTRON(MODIFIER||||203|LOC_Os04g26950|protein_coding|CODING|LOC_Os04g26950.1|1|1) FN446-S.SNP.4:15946864 chr04:015946864 0 W/15946864-15946864 FN446-S Single Base Substitution A-G INTRON HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN3296-S.SNP.4:15947356 chr04:015947356 0 W/15947356-15947356 FN3296-S SNP T -> G AC=1;AN=184;BQB=0.917113;DP=2627;DP4=1184,1371,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.96001e-06;MQSB=0.792201;RPB=0.756333;SGB=44.2207;VDB=0.771728;EFF=INTRON(MODIFIER||||517|LOC_Os04g26960|protein_coding|CODING|LOC_Os04g26960.1|5|1) FN486-S.SNP.4:15949885 chr04:015949885 0 W/15949885-15949885 FN486-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2268-S.SNP.4:15954451 chr04:015954451 0 W/15954451-15954451 FN2268-S SNP G -> T AC=2;AN=190;BQB=0.31027;DP=4814;DP4=2514,1910,31,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000207727;MQB=9.29586e-36;MQSB=0.536311;RPB=0.986413;SGB=231.564;VDB=0.497968;EFF=INTRON(MODIFIER||||462|LOC_Os04g26980|protein_coding|CODING|LOC_Os04g26980.1|6|1) FN3444-S.SNP.4:15955804 chr04:015955804 0 W/15955804-15955804 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.995009;DP=2563;DP4=1112,1381,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11179e-05;MQSB=0.998245;RPB=0.968971;SGB=30.6558;VDB=0.945743;EFF=SPLICE_SITE_REGION(LOW||||462|LOC_Os04g26980|protein_coding|CODING|LOC_Os04g26980.1|3|1),INTRON(MODIFIER||||462|LOC_Os04g26980|protein_coding|CODING|LOC_Os04g26980.1|3|1) FN3687-S.SNP.4:15955832 chr04:015955832 0 W/15955832-15955832 FN3687-S SNP A -> G AC=1;AN=190;BQB=0.855688;DP=2876;DP4=1314,1455,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0005e-08;MQSB=0.869737;RPB=0.351553;SGB=50.3161;VDB=0.715252;EFF=INTRON(MODIFIER||||462|LOC_Os04g26980|protein_coding|CODING|LOC_Os04g26980.1|3|1) FN3998-S.SNP.4:15957041 chr04:015957041 0 W/15957041-15957041 FN3998-S SNP G -> A AC=2;AN=168;BQB=0.998819;DP=2421;DP4=1165,1143,10,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.70272e-11;MQSB=0.949839;RPB=0.367054;SGB=51.902;VDB=0.168724;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P25L|462|LOC_Os04g26980|protein_coding|CODING|LOC_Os04g26980.1|1|1) FN4165-S.SNP.4:15959283 chr04:015959283 0 W/15959283-15959283 FN4165-S SNP T -> C AC=1;AN=170;BQB=0.860795;DP=2485;DP4=1356,1027,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.31869e-10;MQSB=0.975611;RPB=0.671712;SGB=45.206;VDB=0.714384;EFF=INTERGENIC(MODIFIER||||||||||1) FN-14.SNP.4:15965226 chr04:015965226 0 W/15965226-15965226 FN-14 Single Base Substitution G-A INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2090-S.SNP.4:15968511 chr04:015968511 0 W/15968511-15968511 FN2090-S SNP G -> A AC=2;AN=168;BQB=0.137476;DP=2480;DP4=1006,1362,16,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.13911e-09;MQSB=0.966185;RPB=0.0939269;SGB=-10.2027;VDB=0.180915;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.4:15969188 chr04:015969188 0 W/15969188-15969188 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.968498;DP=2709;DP4=1287,1347,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19035e-08;MQSB=0.947162;RPB=0.999851;SGB=34.878;VDB=0.244124;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.4:15971012 chr04:015971012 0 W/15971012-15971012 FN513-S Single Base Substitution C-A INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-120.SNP.4:15972612 chr04:015972612 0 W/15972612-15972612 FN-120 Single Base Substitution T-A INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1028-S.SNP.4:15973102 chr04:015973102 0 W/15973102-15973102 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN4032-S.SNP.4:15973153 chr04:015973153 0 W/15973153-15973153 FN4032-S SNP G -> A AC=1;AN=168;BQB=0.983039;DP=2758;DP4=1051,1547,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.42051e-11;MQSB=0.895445;RPB=0.218855;SGB=31.908;VDB=0.923684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.4:15978758 chr04:015978758 0 W/15978758-15978758 FN3845-S SNP C -> A AC=2;AN=190;BQB=0.948989;DP=2763;DP4=1536,1125,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.16887e-13;MQSB=0.99859;RPB=0.489308;SGB=99.1879;VDB=0.813811;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.4:15979761 chr04:015979761 0 W/15979761-15979761 FN2212-S SNP T -> G AC=2;AN=190;BQB=0.830977;DP=5030;DP4=2235,2477,37,46;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.998995;RPB=0.999449;SGB=274.788;VDB=0.947616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.4:15982147 chr04:015982147 0 W/15982147-15982147 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.379346;DP=4994;DP4=2413,2392,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.61717e-17;MQSB=0.858905;RPB=0.889922;SGB=55.5366;VDB=0.405486;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.4:15982360 chr04:015982360 0 W/15982360-15982360 FN-178 Single Base Substitution A-T INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN4305-S.SNP.4:15984847 chr04:015984847 0 W/15984847-15984847 FN4305-S SNP G -> T AC=1;AN=170;BQB=0.986382;DP=2371;DP4=1163,1111,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.29331e-08;MQSB=0.375949;RPB=0.607443;SGB=61.2001;VDB=0.271244;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.4:15993057 chr04:015993057 0 W/15993057-15993057 FN984-S Single Base Substitution A-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1426-S.SNP.4:15993603 chr04:015993603 0 W/15993603-15993603 FN1426-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2698-S.SNP.4:15996126 chr04:015996126 0 W/15996126-15996126 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.926901;DP=5034;DP4=2303,2409,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12797e-10;MQSB=0.732452;RPB=0.963439;SGB=61.9006;VDB=0.805607;EFF=INTRON(MODIFIER||||440|LOC_Os04g27034|protein_coding|CODING|LOC_Os04g27034.1|2|1) FN1635-S.SNP.4:15998299 chr04:015998299 0 W/15998299-15998299 FN1635-S SNP C -> A AC=2;AN=188;BQB=0.0175212;DP=4226;DP4=1962,2224,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.83258e-07;MQSB=0.80155;RPB=0.255125;SGB=-38.278;VDB=0.271084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.4:15998318 chr04:015998318 0 W/15998318-15998318 FN3839-S SNP A -> C AC=1;AN=190;BQB=0.988918;DP=2784;DP4=1340,1344,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80815e-09;MQSB=0.845344;RPB=0.949909;SGB=58.2031;VDB=0.42647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.4:16004685 chr04:016004685 0 W/16004685-16004685 FN3357-S SNP T -> A AC=1;AN=184;BQB=0.997762;DP=3304;DP4=1917,1270,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05152e-09;MQSB=0.967441;RPB=0.956381;SGB=25.7969;VDB=0.301205;EFF=INTRON(MODIFIER||||355|LOC_Os04g27060|protein_coding|CODING|LOC_Os04g27060.1|3|1) FN2665-S.SNP.4:16021497 chr04:016021497 0 W/16021497-16021497 FN2665-S SNP C -> A AC=1;AN=200;BQB=0.746781;DP=5022;DP4=2331,2425,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14433e-13;MQSB=0.972884;RPB=0.776361;SGB=65.5058;VDB=0.190702;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.4:16021776 chr04:016021776 0 W/16021776-16021776 FN949-S Single Base Substitution G-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN3914-S.SNP.4:16025565 chr04:016025565 0 W/16025565-16025565 FN3914-S SNP C -> T AC=1;AN=158;BQB=0.678919;DP=2466;DP4=1296,1042,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.72147e-07;MQSB=0.987964;RPB=0.963617;SGB=34.0735;VDB=0.171424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.4:16036123 chr04:016036123 0 W/16036123-16036123 FN2353 SNP C -> T AC=1;AN=192;BQB=0.637244;DP=4129;DP4=2202,1708,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.0013741;MQSB=0.00386725;RPB=0.182396;SGB=49.2105;VDB=0.830124;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.4:16036414 chr04:016036414 0 W/16036414-16036414 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3401-S.SNP.4:16039077 chr04:016039077 0 W/16039077-16039077 FN3401-S SNP G -> T AC=1;AN=184;BQB=0.968598;DP=3998;DP4=2180,1724,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.002001;MQB=1.75817e-10;MQSB=0.00113332;RPB=0.481881;SGB=98.4821;VDB=0.890801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S517Y|554|LOC_Os04g27094|protein_coding|CODING|LOC_Os04g27094.1|3|1) FN3591-S.SNP.4:16042447 chr04:016042447 0 W/16042447-16042447 FN3591-S SNP C -> T AC=2;AN=188;BQB=0.919628;DP=2768;DP4=1507,1188,10,16;HOB=0.0210502;ICB=0.494738;MQ=39;MQ0F=0.0697254;MQB=0.0187124;MQSB=4.36194e-31;RPB=0.878191;SGB=112.585;VDB=0.387213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.4:16043864 chr04:016043864 0 W/16043864-16043864 FN3503-S SNP C -> T AC=1;AN=188;BQB=0.97584;DP=2672;DP4=1293,1272,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.52075e-05;MQSB=0.0749172;RPB=0.132262;SGB=30.8063;VDB=0.320835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.4:16046755 chr04:016046755 0 W/16046755-16046755 FN2288 SNP C -> T AC=2;AN=192;BQB=0.887124;DP=5006;DP4=2119,2451,10,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.42621e-18;MQSB=0.677256;RPB=0.614082;SGB=96.8096;VDB=0.133229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.4:16051970 chr04:016051970 0 W/16051970-16051970 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3746-S.SNP.4:16053863 chr04:016053863 0 W/16053863-16053863 FN3746-S SNP C -> T AC=2;AN=190;BQB=0.598928;DP=2658;DP4=1132,1359,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.59092e-11;MQSB=0.996908;RPB=0.497025;SGB=126.511;VDB=0.637356;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.4:16059815 chr04:016059815 0 W/16059815-16059815 FN980-S Single Base Substitution T-A INTRON HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN980-S.SNP.4:16059816 chr04:016059816 0 W/16059816-16059816 FN980-S Single Base Substitution G-T INTRON HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-363.SNP.4:16067134 chr04:016067134 0 W/16067134-16067134 FN-363 Single Base Substitution A-C INTRON HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN4189-S.SNP.4:16067591 chr04:016067591 0 W/16067591-16067591 FN4189-S SNP A -> T AC=2;AN=170;BQB=0.889886;DP=2311;DP4=1014,1216,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.2933e-11;MQSB=0.999241;RPB=0.322802;SGB=92.2986;VDB=0.557653;EFF=INTRON(MODIFIER||||599|LOC_Os04g27190|protein_coding|CODING|LOC_Os04g27190.1|1|1),INTRON(MODIFIER||||506|LOC_Os04g27190|protein_coding|CODING|LOC_Os04g27190.2|1|1) FN3531-S.SNP.4:16072257 chr04:016072257 0 W/16072257-16072257 FN3531-S SNP G -> A AC=2;AN=188;BQB=0.997518;DP=2652;DP4=800,1501,3,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.09791e-09;MQSB=0.00542686;RPB=0.69114;SGB=57.244;VDB=0.418242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A11V|124|LOC_Os04g27200|protein_coding|CODING|LOC_Os04g27200.1|1|1) FN1255-S.SNP.4:16075082 chr04:016075082 0 W/16075082-16075082 FN1255-S Single Base Substitution C-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1585-S.SNP.4:16075881 chr04:016075881 0 W/16075881-16075881 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2611-S.SNP.4:16088946 chr04:016088946 0 W/16088946-16088946 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.982427;DP=4119;DP4=1559,2285,10,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00121389;MQB=3.69507e-08;MQSB=0.00178524;RPB=0.995764;SGB=104.921;VDB=0.246984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.4:16100616 chr04:016100616 0 W/16100616-16100616 FN2089-S SNP G -> A AC=1;AN=168;BQB=0.0276719;DP=4677;DP4=2445,2170,21,27;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.070558;MQB=0.000580456;MQSB=0.803918;RPB=0.323698;SGB=-159.723;VDB=0.644856;EFF=UTR_5_PRIME(MODIFIER||115||142|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.2|1|1),UTR_5_PRIME(MODIFIER||115||89|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.4|1|1),UTR_5_PRIME(MODIFIER||883||120|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.3|1|1),UTR_5_PRIME(MODIFIER||115||142|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.1|1|1) FN2083-S.SNP.4:16100983 chr04:016100983 0 W/16100983-16100983 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.439724;DP=4406;DP4=2111,1971,45,243;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0358602;MQB=0;MQSB=2.38563e-30;RPB=0.324479;SGB=-2905.07;VDB=0.496494;EFF=UTR_5_PRIME(MODIFIER||516||120|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.3|2|1),INTRON(MODIFIER||||142|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.1|1|1),INTRON(MODIFIER||||142|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.2|1|1),INTRON(MODIFIER||||89|LOC_Os04g27250|protein_coding|CODING|LOC_Os04g27250.4|1|1) FN3570-S.SNP.4:16107307 chr04:016107307 0 W/16107307-16107307 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.818071;DP=2767;DP4=1481,1136,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000361402;MQB=0.0014985;MQSB=0.142103;RPB=0.981449;SGB=44.5415;VDB=0.130593;EFF=INTRON(MODIFIER||||462|LOC_Os04g27260|protein_coding|CODING|LOC_Os04g27260.1|1|1) FN3832-S.SNP.4:16108540 chr04:016108540 0 W/16108540-16108540 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.996415;DP=2936;DP4=1196,1429,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.46746e-07;MQSB=0.667347;RPB=0.796099;SGB=43.2083;VDB=0.72717;EFF=INTERGENIC(MODIFIER||||||||||1) FN-142.SNP.4:16110373 chr04:016110373 0 W/16110373-16110373 FN-142 Single Base Substitution C-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN902-S.SNP.4:16117632 chr04:016117632 0 W/16117632-16117632 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2593-S.SNP.4:16117953 chr04:016117953 0 W/16117953-16117953 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.870382;DP=3390;DP4=1564,1570,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.49876e-08;MQSB=0.512886;RPB=0.390259;SGB=43.7442;VDB=0.39454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.4:16117954 chr04:016117954 0 W/16117954-16117954 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.348766;DP=3399;DP4=1601,1574,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.75432e-09;MQSB=0.581435;RPB=0.175426;SGB=67.9293;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.4:16118584 chr04:016118584 0 W/16118584-16118584 FN3560-S SNP A -> G AC=2;AN=188;BQB=0.880159;DP=3862;DP4=1810,1838,23,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.1863e-26;MQSB=0.830927;RPB=0.346822;SGB=181.259;VDB=0.0227375;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.4:16126465 chr04:016126465 0 W/16126465-16126465 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN4300-S.SNP.4:16127826 chr04:016127826 0 W/16127826-16127826 FN4300-S SNP C -> T AC=2;AN=170;BQB=0.910484;DP=2151;DP4=886,1213,4,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.53546e-06;MQSB=0.479266;RPB=0.380686;SGB=24.5502;VDB=0.472399;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.4:16134926 chr04:016134926 0 W/16134926-16134926 FN973-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g27310 transposon protein, putative, unclassified, expressed SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN-156.SNP.4:16135742 chr04:016135742 0 W/16135742-16135742 FN-156 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g27310 transposon protein, putative, unclassified, expressed SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2496.SNP.4:16158910 chr04:016158910 0 W/16158910-16158910 FN2496 SNP T -> A AC=1;AN=200;BQB=0.473061;DP=4904;DP4=2285,2424,11,5;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.270392;MQB=0.161814;MQSB=1.72281e-07;RPB=0.546683;SGB=47.4799;VDB=0.328546;EFF=INTRON(MODIFIER||||599|LOC_Os04g27340|protein_coding|CODING|LOC_Os04g27340.1|3|1) FN934-S.SNP.4:16160763 chr04:016160763 0 W/16160763-16160763 FN934-S Single Base Substitution A-G INTRON HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN973-S.SNP.4:16166936 chr04:016166936 0 W/16166936-16166936 FN973-S Single Base Substitution C-T INTRON HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2637-S.SNP.4:16174321 chr04:016174321 0 W/16174321-16174321 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.694428;DP=5011;DP4=2540,2229,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32287e-18;MQSB=0.963372;RPB=0.665547;SGB=101.557;VDB=0.0118486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.4:16177073 chr04:016177073 0 W/16177073-16177073 FN3890-S SNP C -> A AC=2;AN=158;BQB=0.942924;DP=2733;DP4=1388,1161,28,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.75334e-25;MQSB=0.97698;RPB=0.978557;SGB=92.5327;VDB=0.553034;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.4:16182014 chr04:016182014 0 W/16182014-16182014 FN1069-S Single Base Substitution A-C INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3564-S.SNP.4:16184673 chr04:016184673 0 W/16184673-16184673 FN3564-S SNP A -> G AC=1;AN=186;BQB=0.997858;DP=2655;DP4=1306,1232,7,4;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.75674e-07;MQSB=0.996534;RPB=0.7827;SGB=28.8977;VDB=0.381414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.4:16185703 chr04:016185703 0 W/16185703-16185703 FN3630-S SNP T -> A AC=2;AN=190;BQB=0.964131;DP=2754;DP4=1412,1211,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.08653e-12;MQSB=0.958354;RPB=0.765482;SGB=71.6393;VDB=0.594894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.4:16189568 chr04:016189568 0 W/16189568-16189568 FN3862-S SNP A -> G AC=1;AN=158;BQB=0.9405;DP=2456;DP4=1195,1151,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.15229e-07;MQSB=0.919798;RPB=0.704998;SGB=47.0672;VDB=0.361025;EFF=INTRON(MODIFIER||||507|LOC_Os04g27400|protein_coding|CODING|LOC_Os04g27400.1|3|1) FN3856-S.SNP.4:16189774 chr04:016189774 0 W/16189774-16189774 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.983512;DP=2180;DP4=1108,999,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.40907e-05;MQSB=0.987881;RPB=0.249266;SGB=25.2211;VDB=0.347872;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A243|507|LOC_Os04g27400|protein_coding|CODING|LOC_Os04g27400.1|3|1) FN2650-S.SNP.4:16193861 chr04:016193861 0 W/16193861-16193861 FN2650-S SNP C -> A AC=1;AN=200;BQB=0.710514;DP=5082;DP4=2419,2367,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21176e-11;MQSB=0.95867;RPB=0.231008;SGB=61.9006;VDB=0.0587952;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.4:16195520 chr04:016195520 0 W/16195520-16195520 FN-64 Single Base Substitution G-A INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN4025-S.SNP.4:16196691 chr04:016196691 0 W/16196691-16196691 FN4025-S SNP C -> G AC=1;AN=168;BQB=0.383857;DP=2368;DP4=1472,768,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.46611e-06;MQSB=0.974734;RPB=0.889291;SGB=22.1847;VDB=0.388119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.4:16198940 chr04:016198940 0 W/16198940-16198940 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.941712;DP=3054;DP4=1227,1696,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.45987e-07;MQSB=0.0843695;RPB=0.950998;SGB=85.5263;VDB=0.785767;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.4:16200313 chr04:016200313 0 W/16200313-16200313 FN-377 Single Base Substitution C-T INTRON HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-248.SNP.4:16209704 chr04:016209704 0 W/16209704-16209704 FN-248 Single Base Substitution T-C INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3825-S.SNP.4:16218059 chr04:016218059 0 W/16218059-16218059 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.903626;DP=2676;DP4=1251,1289,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000373692;MQB=2.25053e-07;MQSB=0.921615;RPB=0.771979;SGB=23.6597;VDB=0.754234;EFF=INTRON(MODIFIER||||471|LOC_Os04g27430|protein_coding|CODING|LOC_Os04g27430.1|1|1) FN1262-S.SNP.4:16221189 chr04:016221189 0 W/16221189-16221189 FN1262-S Single Base Substitution C-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN-76.SNP.4:16222604 chr04:016222604 0 W/16222604-16222604 FN-76 Single Base Substitution A-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1067-S.SNP.4:16226138 chr04:016226138 0 W/16226138-16226138 FN1067-S Single Base Substitution T-C INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN-314.SNP.4:16231383 chr04:016231383 0 W/16231383-16231383 FN-314 Single Base Substitution A-G INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-170.SNP.4:16237743 chr04:016237743 0 W/16237743-16237743 FN-170 Single Base Substitution G-A INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-125.SNP.4:16239056 chr04:016239056 0 W/16239056-16239056 FN-125 Single Base Substitution G-T INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3836-S.SNP.4:16244862 chr04:016244862 0 W/16244862-16244862 FN3836-S SNP C -> T AC=2;AN=190;BQB=0.977493;DP=3701;DP4=2030,1477,24,14;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0167522;MQB=5.49247e-11;MQSB=3.85381e-05;RPB=0.758218;SGB=124.947;VDB=0.406138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3836-S.SNP.4:16244863 chr04:016244863 0 W/16244863-16244863 FN3836-S SNP C -> T AC=2;AN=190;BQB=0.989225;DP=3711;DP4=2016,1485,26,16;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0167071;MQB=5.55626e-12;MQSB=5.11772e-05;RPB=0.816747;SGB=92.6144;VDB=0.335636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.4:16248425 chr04:016248425 0 W/16248425-16248425 FN3467-S SNP G -> T AC=1;AN=184;BQB=0.884122;DP=3288;DP4=1675,1531,17,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0139903;MQB=4.79021e-13;MQSB=0.569366;RPB=0.154522;SGB=88.5747;VDB=0.826781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W442L|1685|LOC_Os04g27490|protein_coding|CODING|LOC_Os04g27490.1|3|1) FN3916-S.SNP.4:16250695 chr04:016250695 0 W/16250695-16250695 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.987154;DP=2647;DP4=1223,1321,12,9;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0173782;MQB=3.11924e-05;MQSB=0.939156;RPB=0.984981;SGB=61.029;VDB=0.00982382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1170S|1685|LOC_Os04g27490|protein_coding|CODING|LOC_Os04g27490.1|4|1) FN3866-S.SNP.4:16252937 chr04:016252937 0 W/16252937-16252937 FN3866-S SNP C -> G AC=1;AN=158;BQB=0.930929;DP=2246;DP4=1226,915,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=4.07577e-05;MQSB=0.838901;RPB=0.615712;SGB=55.806;VDB=0.657675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.4:16253026 chr04:016253026 0 W/16253026-16253026 FN1332-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. CW-631-3-1.SNP.4:16253117 chr04:016253117 0 W/16253117-16253117 CW-631-3-1 Single Base Substitution C-G INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1023-S.SNP.4:16253507 chr04:016253507 0 W/16253507-16253507 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3800-S.SNP.4:16253722 chr04:016253722 0 W/16253722-16253722 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.899146;DP=2775;DP4=1372,1305,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07248e-05;MQSB=0.112695;RPB=0.442979;SGB=35.4339;VDB=0.441508;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.4:16258813 chr04:016258813 0 W/16258813-16258813 FN4230-S SNP A -> T AC=1;AN=170;BQB=0.537371;DP=2424;DP4=1206,1128,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.28666e-05;MQSB=0.250336;RPB=0.112899;SGB=31.4354;VDB=0.0607873;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atT|I702|984|LOC_Os04g27500|protein_coding|CODING|LOC_Os04g27500.1|2|1) FN3518-S.SNP.4:16259562 chr04:016259562 0 W/16259562-16259562 FN3518-S SNP C -> T AC=1;AN=188;BQB=0.962545;DP=2938;DP4=1390,1485,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30319e-09;MQSB=0.782321;RPB=0.318882;SGB=67.1521;VDB=0.849155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S952L|984|LOC_Os04g27500|protein_coding|CODING|LOC_Os04g27500.1|2|1) FN1136-S.SNP.4:16260616 chr04:016260616 0 W/16260616-16260616 FN1136-S Single Base Substitution T-C INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN2120-S.SNP.4:16261268 chr04:016261268 0 W/16261268-16261268 FN2120-S SNP T -> C AC=2;AN=168;BQB=0.677001;DP=2019;DP4=1079,877,30,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.66027e-24;MQSB=0.755134;RPB=0.997242;SGB=62.0112;VDB=0.276755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.4:16261354 chr04:016261354 0 W/16261354-16261354 FN2120-S SNP A -> G AC=2;AN=168;BQB=0.545753;DP=2723;DP4=1720,950,33,10;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.13611e-11;MQSB=0.00281862;RPB=0.969514;SGB=90.2476;VDB=0.999476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.4:16261456 chr04:016261456 0 W/16261456-16261456 FN3716-S SNP C -> A AC=1;AN=190;BQB=0.939315;DP=2908;DP4=1554,1267,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.81158e-06;MQSB=0.121836;RPB=0.987471;SGB=49.0954;VDB=0.627308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.4:16263205 chr04:016263205 0 W/16263205-16263205 FN1407-S Single Base Substitution C-T INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2403.SNP.4:16266488 chr04:016266488 0 W/16266488-16266488 FN2403 SNP C -> T AC=1;AN=200;BQB=0.936724;DP=4155;DP4=1934,1928,13,8;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.119374;MQB=0.975866;MQSB=7.77613e-13;RPB=0.997663;SGB=39.9056;VDB=0.376376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.4:16267300 chr04:016267300 0 W/16267300-16267300 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.744884;DP=4279;DP4=2117,1756,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00514139;MQB=1.66556e-05;MQSB=0.712853;RPB=0.115512;SGB=8.77274;VDB=0.114219;EFF=INTRON(MODIFIER||||1861|LOC_Os04g27520|protein_coding|CODING|LOC_Os04g27520.1|7|1) FN-142.SNP.4:16269188 chr04:016269188 0 W/16269188-16269188 FN-142 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g27520 retrotransposon protein, putative, unclassified, expressed SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN2779-S.SNP.4:16271044 chr04:016271044 0 W/16271044-16271044 FN2779-S SNP T -> C AC=1;AN=188;BQB=0.998294;DP=3322;DP4=1716,1272,16,14;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.051174;MQB=0.934572;MQSB=0;RPB=0.996986;SGB=28.4908;VDB=0.633655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D592G|1861|LOC_Os04g27520|protein_coding|CODING|LOC_Os04g27520.1|2|1) FN1355-S.SNP.4:16271157 chr04:016271157 0 W/16271157-16271157 FN1355-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN870-S.SNP.4:16272447 chr04:016272447 0 W/16272447-16272447 FN870-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g27520 retrotransposon protein, putative, unclassified, expressed SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3319-S.SNP.4:16272676 chr04:016272676 0 W/16272676-16272676 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.998317;DP=3757;DP4=1736,1934,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0276817;MQB=0.0859059;MQSB=1.67955e-06;RPB=0.755461;SGB=66.8296;VDB=0.0549041;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E91|1861|LOC_Os04g27520|protein_coding|CODING|LOC_Os04g27520.1|1|1) FN3982-S.SNP.4:16276835 chr04:016276835 0 W/16276835-16276835 FN3982-S SNP G -> A AC=1;AN=168;BQB=0.989002;DP=2985;DP4=1535,1338,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55386e-12;MQSB=0.913902;RPB=0.380651;SGB=55.3328;VDB=0.102673;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.4:16277467 chr04:016277467 0 W/16277467-16277467 FN1198-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1485-S.SNP.4:16294535 chr04:016294535 0 W/16294535-16294535 FN1485-S Single Base Substitution C-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN_N1-169-1.SNP.4:16297312 chr04:016297312 0 W/16297312-16297312 FN_N1-169-1 Single Base Substitution A-C HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2207-S.SNP.4:16297758 chr04:016297758 0 W/16297758-16297758 FN2207-S SNP T -> G AC=1;AN=190;BQB=0.825431;DP=5297;DP4=2839,2278,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33955e-11;MQSB=0.821146;RPB=0.67423;SGB=-10.4526;VDB=0.727505;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.4:16301905 chr04:016301905 0 W/16301905-16301905 W472-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3301-S.SNP.4:16304317 chr04:016304317 0 W/16304317-16304317 FN3301-S SNP G -> T AC=2;AN=184;BQB=0.962235;DP=3281;DP4=1578,1569,18,16;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00548613;MQB=4.16712e-11;MQSB=0.0484598;RPB=0.968347;SGB=109.705;VDB=0.670998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-M.SNP.4:16304486 chr04:016304486 0 W/16304486-16304486 FN1554-M SNP T -> G AC=1;AN=190;BQB=0.389015;DP=4713;DP4=1754,2265,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.7578e-08;MQSB=0.921058;RPB=0.272154;SGB=-36.7706;VDB=0.581758;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.4:16305021 chr04:016305021 0 W/16305021-16305021 W416-6-1 Single Base Substitution G-C INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3710-S.SNP.4:16308004 chr04:016308004 0 W/16308004-16308004 FN3710-S SNP C -> A AC=1;AN=190;BQB=0.981055;DP=2741;DP4=1219,1418,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00145932;MQB=6.96567e-05;MQSB=0.904471;RPB=0.231594;SGB=35.4339;VDB=0.326267;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E630*|909|LOC_Os04g27560|protein_coding|CODING|LOC_Os04g27560.1|6|1) FN3456-S.SNP.4:16310321 chr04:016310321 0 W/16310321-16310321 FN3456-S SNP A -> G AC=1;AN=184;BQB=0.696475;DP=3087;DP4=1084,1864,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70642e-07;MQSB=0.00175279;RPB=0.757691;SGB=-35.2739;VDB=0.533311;EFF=SPLICE_SITE_REGION(LOW||||909|LOC_Os04g27560|protein_coding|CODING|LOC_Os04g27560.1|2|1),INTRON(MODIFIER||||909|LOC_Os04g27560|protein_coding|CODING|LOC_Os04g27560.1|2|1) FN576-S.SNP.4:16315089 chr04:016315089 0 W/16315089-16315089 FN576-S Single Base Substitution G-A INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN-199.SNP.4:16321911 chr04:016321911 0 W/16321911-16321911 FN-199 Single Base Substitution C-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1058-S.SNP.4:16323011 chr04:016323011 0 W/16323011-16323011 FN1058-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g27600 hypothetical protein SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2621-S.SNP.4:16324553 chr04:016324553 0 W/16324553-16324553 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.595095;DP=4908;DP4=1984,2642,10,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.69618e-12;MQSB=0.967115;RPB=0.118439;SGB=150.973;VDB=0.850242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.4:16326011 chr04:016326011 0 W/16326011-16326011 FN3955-S SNP C -> A AC=2;AN=168;BQB=0.776932;DP=2768;DP4=1424,1221,11,12;HOB=0.0235261;ICB=0.494119;MQ=33;MQ0F=0.101156;MQB=0.256269;MQSB=6.22548e-26;RPB=0.869162;SGB=96.481;VDB=0.783926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W932C|1021|LOC_Os04g27610|protein_coding|CODING|LOC_Os04g27610.1|3|1) FN2597-S.SNP.4:16327853 chr04:016327853 0 W/16327853-16327853 FN2597-S SNP C -> G AC=1;AN=198;BQB=0.947532;DP=3800;DP4=1793,1790,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0565789;MQB=0.0834326;MQSB=2.56824e-06;RPB=0.820545;SGB=63.0809;VDB=0.261952;EFF=INTRON(MODIFIER||||1021|LOC_Os04g27610|protein_coding|CODING|LOC_Os04g27610.1|2|1) FN-192.SNP.4:16328001 chr04:016328001 0 W/16328001-16328001 FN-192 Single Base Substitution T-A INTRON HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1472-S.SNP.4:16329859 chr04:016329859 0 W/16329859-16329859 FN1472-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g27620 expressed protein SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN3594-S.SNP.4:16334071 chr04:016334071 0 W/16334071-16334071 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.999972;DP=3836;DP4=1948,1815,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.24304e-12;MQSB=0.999977;RPB=0.999689;SGB=41.3359;VDB=0.522035;EFF=INTRON(MODIFIER||||1405|LOC_Os04g27630|protein_coding|CODING|LOC_Os04g27630.1|3|1) FN1577-S.SNP.4:16334172 chr04:016334172 0 W/16334172-16334172 FN1577-S Single Base Substitution C-T INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2320.SNP.4:16334939 chr04:016334939 0 W/16334939-16334939 FN2320 SNP C -> A AC=2;AN=192;BQB=0.999964;DP=4396;DP4=1989,2188,17,16;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=3.93636e-15;MQSB=0.400637;RPB=0.272623;SGB=145.062;VDB=0.220763;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V373|1405|LOC_Os04g27630|protein_coding|CODING|LOC_Os04g27630.1|5|1) FN2320.SNP.4:16334942 chr04:016334942 0 W/16334942-16334942 FN2320 SNP C -> A AC=2;AN=192;BQB=0.673442;DP=4428;DP4=2023,2170,16,16;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=1.23031e-17;MQSB=0.663611;RPB=0.395645;SGB=103.938;VDB=0.11019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D374E|1405|LOC_Os04g27630|protein_coding|CODING|LOC_Os04g27630.1|5|1) FN2267-S.SNP.4:16336552 chr04:016336552 0 W/16336552-16336552 FN2267-S SNP C -> A AC=1;AN=190;BQB=0.961369;DP=4520;DP4=1984,2171,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000221239;MQB=1.15415e-08;MQSB=0.0295976;RPB=0.970832;SGB=43.2083;VDB=0.513337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A890E|1405|LOC_Os04g27630|protein_coding|CODING|LOC_Os04g27630.1|6|1) FN1556-S.SNP.4:16339023 chr04:016339023 0 W/16339023-16339023 FN1556-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2129-S.SNP.4:16341999 chr04:016341999 0 W/16341999-16341999 FN2129-S SNP C -> G AC=1;AN=168;BQB=0.921046;DP=2071;DP4=922,1095,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.50258e-11;MQSB=0.92891;RPB=0.856338;SGB=48.4712;VDB=0.984684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R200S|430|LOC_Os04g27650|protein_coding|CODING|LOC_Os04g27650.1|1|1) FN-145.SNP.4:16344047 chr04:016344047 0 W/16344047-16344047 FN-145 Single Base Substitution G-A INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-145.SNP.4:16344048 chr04:016344048 0 W/16344048-16344048 FN-145 Single Base Substitution T-A INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN_822-5-1.SNP.4:16345111 chr04:016345111 0 W/16345111-16345111 FN_822-5-1 Single Base Substitution G-A Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1288-S.SNP.4:16348564 chr04:016348564 0 W/16348564-16348564 FN1288-S Single Base Substitution T-C INTRON HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3564-S.SNP.4:16358782 chr04:016358782 0 W/16358782-16358782 FN3564-S SNP G -> A AC=2;AN=188;BQB=0.910444;DP=3244;DP4=1643,1472,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.09617e-20;MQSB=0.99488;RPB=0.7577;SGB=158.018;VDB=0.901579;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.4:16359426 chr04:016359426 0 W/16359426-16359426 FN1262-S Single Base Substitution A-G INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3380-S.SNP.4:16360086 chr04:016360086 0 W/16360086-16360086 FN3380-S SNP T -> C AC=2;AN=184;BQB=0.998804;DP=2889;DP4=1507,1282,15,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.39724e-14;MQSB=0.907284;RPB=0.991987;SGB=93.9603;VDB=0.312946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.4:16361700 chr04:016361700 0 W/16361700-16361700 FN3463-S SNP T -> C AC=2;AN=184;BQB=0.992032;DP=2994;DP4=1273,1531,12,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.32078e-19;MQSB=0.695819;RPB=0.697984;SGB=161.787;VDB=0.381112;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.4:16363567 chr04:016363567 0 W/16363567-16363567 FN1006-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2719-S.SNP.4:16368897 chr04:016368897 0 W/16368897-16368897 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.581685;DP=4877;DP4=2208,2510,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61348e-07;MQSB=0.928424;RPB=0.868405;SGB=36.6644;VDB=0.58245;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.4:16370008 chr04:016370008 0 W/16370008-16370008 FN-214 Single Base Substitution A-G INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1523-S.SNP.4:16377217 chr04:016377217 0 W/16377217-16377217 FN1523-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g27710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1662-S.SNP.4:16379547 chr04:016379547 0 W/16379547-16379547 FN1662-S Single Base Substitution G-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN1496-S.SNP.4:16383717 chr04:016383717 0 W/16383717-16383717 FN1496-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g27720 terpene synthase, putative, expressed SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN-301.SNP.4:16387152 chr04:016387152 0 W/16387152-16387152 FN-301 Single Base Substitution C-T INTRON HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN963-S.SNP.4:16387152 chr04:016387152 0 W/16387152-16387152 FN963-S Single Base Substitution C-T INTRON HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2398.SNP.4:16391112 chr04:016391112 0 W/16391112-16391112 FN2398 SNP G -> A AC=1;AN=200;BQB=0.0637569;DP=4221;DP4=1694,2270,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22328e-09;MQSB=0.938575;RPB=0.895894;SGB=-10.6896;VDB=0.857845;EFF=INTRON(MODIFIER||||1177|LOC_Os04g27730|protein_coding|CODING|LOC_Os04g27730.1|4|1) FN2663-S.SNP.4:16395076 chr04:016395076 0 W/16395076-16395076 FN2663-S SNP G -> T AC=1;AN=200;BQB=0.995877;DP=5218;DP4=2772,2165,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35559e-16;MQSB=0.909997;RPB=0.984532;SGB=90.7419;VDB=0.545634;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.4:16395613 chr04:016395613 0 W/16395613-16395613 W470-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1688-S.SNP.4:16395776 chr04:016395776 0 W/16395776-16395776 FN1688-S SNP C -> A AC=1;AN=188;BQB=0.998105;DP=3248;DP4=1635,1564,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00215517;MQB=0.00177203;MQSB=1.51281e-06;RPB=0.971468;SGB=31.1628;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.4:16399900 chr04:016399900 0 W/16399900-16399900 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3599-S.SNP.4:16406571 chr04:016406571 0 W/16406571-16406571 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.940014;DP=2938;DP4=1298,1467,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.212e-07;MQSB=0.990336;RPB=0.878362;SGB=62.6088;VDB=0.994287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.4:16407180 chr04:016407180 0 W/16407180-16407180 FN2107-S SNP G -> A AC=1;AN=168;BQB=0.329735;DP=4111;DP4=1907,2156,7,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.93689e-11;MQSB=0.955856;RPB=0.869503;SGB=-98.0622;VDB=0.936458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.4:16407903 chr04:016407903 0 W/16407903-16407903 FN2267-S SNP T -> C AC=1;AN=190;BQB=0.661232;DP=5213;DP4=2443,2495,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96904e-08;MQSB=0.950166;RPB=0.631804;SGB=33.8752;VDB=0.896751;EFF=INTRON(MODIFIER||||231|LOC_Os04g27760|protein_coding|CODING|LOC_Os04g27760.1|6|1) FN1280-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN1280-S Single Base Substitution C-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2544-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN2544-S SNP C -> T AC=2;AN=198;BQB=0.9457;DP=4418;DP4=2035,2074,15,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.74704e-15;MQSB=0.99861;RPB=0.903832;SGB=73.4614;VDB=0.602434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.990991;DP=2521;DP4=1310,1101,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.50465e-09;MQSB=0.72205;RPB=0.826883;SGB=49.835;VDB=0.136001;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.808839;DP=2324;DP4=1186,1024,16,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.21283e-13;MQSB=0.72774;RPB=0.352867;SGB=53.5365;VDB=0.662453;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.290453;DP=2335;DP4=1306,950,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00540506;MQSB=0.956066;RPB=0.944125;SGB=8.07909;VDB=0.955963;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN498-S Single Base Substitution C-T INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN984-S.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 FN984-S Single Base Substitution C-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. W472-5-1.SNP.4:16412181 chr04:016412181 0 W/16412181-16412181 W472-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN-87.SNP.4:16419312 chr04:016419312 0 W/16419312-16419312 FN-87 Single Base Substitution C-T INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2361.SNP.4:16431685 chr04:016431685 0 W/16431685-16431685 FN2361 SNP G -> A AC=1;AN=192;BQB=0.104963;DP=4656;DP4=2168,2272,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.55417e-08;MQSB=0.859633;RPB=0.980844;SGB=50.4731;VDB=0.965216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.4:16435889 chr04:016435889 0 W/16435889-16435889 FN2177-S SNP T -> A AC=2;AN=168;BQB=0.153769;DP=3122;DP4=951,2135,10,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.13519e-10;MQSB=0.529601;RPB=0.579268;SGB=18.4989;VDB=0.438789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.4:16439227 chr04:016439227 0 W/16439227-16439227 FN2107-S SNP T -> C AC=1;AN=168;BQB=0.206667;DP=3880;DP4=1749,2085,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00309278;MQB=2.25471e-08;MQSB=0.742699;RPB=0.970646;SGB=-92.9238;VDB=0.595531;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.4:16439510 chr04:016439510 0 W/16439510-16439510 FN-375 Single Base Substitution A-T INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN796-S.SNP.4:16440737 chr04:016440737 0 W/16440737-16440737 FN796-S Single Base Substitution A-G INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN3903-S.SNP.4:16450245 chr04:016450245 0 W/16450245-16450245 FN3903-S SNP C -> G AC=1;AN=158;BQB=0.861288;DP=2306;DP4=1049,1175,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=2.56012e-05;MQSB=0.988072;RPB=0.720551;SGB=16.7104;VDB=0.333949;EFF=INTRON(MODIFIER||||267|LOC_Os04g27850|protein_coding|CODING|LOC_Os04g27850.1|1|1) FN2335.SNP.4:16461982 chr04:016461982 0 W/16461982-16461982 FN2335 SNP C -> T AC=1;AN=192;BQB=0.804921;DP=4537;DP4=2098,2251,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=2.08507e-06;MQSB=0.251504;RPB=0.989115;SGB=81.1609;VDB=0.319821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.4:16487002 chr04:016487002 0 W/16487002-16487002 FN1326-S Single Base Substitution C-T INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN497-S.SNP.4:16490646 chr04:016490646 0 W/16490646-16490646 FN497-S Single Base Substitution A-C INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN497-S.SNP.4:16490653 chr04:016490653 0 W/16490653-16490653 FN497-S Single Base Substitution T-G INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2377.SNP.4:16492389 chr04:016492389 0 W/16492389-16492389 FN2377 SNP G -> A AC=2;AN=192;BQB=0.989177;DP=4811;DP4=2312,2161,30,29;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=8.5287e-24;MQSB=0.847143;RPB=0.954386;SGB=200.176;VDB=0.938225;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.4:16498335 chr04:016498335 0 W/16498335-16498335 FN997-S Single Base Substitution A-G INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3800-S.SNP.4:16508069 chr04:016508069 0 W/16508069-16508069 FN3800-S SNP G -> A AC=2;AN=190;BQB=0.853286;DP=2221;DP4=998,1126,10,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=3.17818e-13;MQSB=0.77343;RPB=0.508062;SGB=108.296;VDB=0.201414;EFF=INTRON(MODIFIER||||417|LOC_Os04g27960|protein_coding|CODING|LOC_Os04g27960.1|2|1) FN4241-S.SNP.4:16508444 chr04:016508444 0 W/16508444-16508444 FN4241-S SNP T -> G AC=1;AN=170;BQB=0.936879;DP=2258;DP4=1227,982,10,11;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=0.000374192;MQSB=0.909638;RPB=0.802703;SGB=87.856;VDB=0.225512;EFF=INTRON(MODIFIER||||417|LOC_Os04g27960|protein_coding|CODING|LOC_Os04g27960.1|2|1) FN1261-S.SNP.4:16508751 chr04:016508751 0 W/16508751-16508751 FN1261-S Single Base Substitution T-A INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1720-S.SNP.4:16511171 chr04:016511171 0 W/16511171-16511171 FN1720-S SNP G -> A AC=1;AN=188;BQB=0.00176058;DP=2384;DP4=1317,1013,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.0998322;MQB=0.875599;MQSB=0.0591071;RPB=0.645137;SGB=-35.9944;VDB=0.433478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.4:16514517 chr04:016514517 0 W/16514517-16514517 FN1439-S Single Base Substitution A-G INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN770-S.SNP.4:16515706 chr04:016515706 0 W/16515706-16515706 FN770-S Single Base Substitution G-A INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN510-S.SNP.4:16516607 chr04:016516607 0 W/16516607-16516607 FN510-S Single Base Substitution A-G INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN433-S.SNP.4:16518071 chr04:016518071 0 W/16518071-16518071 FN433-S Single Base Substitution A-C INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN3416-S.SNP.4:16518883 chr04:016518883 0 W/16518883-16518883 FN3416-S SNP A -> T AC=1;AN=184;BQB=0.645348;DP=2744;DP4=1281,1388,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.00320238;MQSB=0.987154;RPB=0.518928;SGB=25.1826;VDB=0.494821;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.4:16522031 chr04:016522031 0 W/16522031-16522031 FN587-S Single Base Substitution C-A INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3981-S.SNP.4:16524967 chr04:016524967 0 W/16524967-16524967 FN3981-S SNP C -> A AC=1;AN=168;BQB=0.999966;DP=2925;DP4=1378,1410,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.79369e-06;MQSB=0.775961;RPB=0.512024;SGB=17.3231;VDB=0.492586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.4:16525189 chr04:016525189 0 W/16525189-16525189 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.176984;DP=3338;DP4=1377,1873,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=9.64916e-06;MQSB=3.87999e-05;RPB=0.395251;SGB=44.2207;VDB=0.758177;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.4:16531840 chr04:016531840 0 W/16531840-16531840 FN495-S Single Base Substitution C-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN1154-S.SNP.4:16532147 chr04:016532147 0 W/16532147-16532147 FN1154-S Single Base Substitution A-G INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN500-S.SNP.4:16533213 chr04:016533213 0 W/16533213-16533213 FN500-S Single Base Substitution A-G INTRON HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN_829-2-5.SNP.4:16547071 chr04:016547071 0 W/16547071-16547071 FN_829-2-5 Single Base Substitution A-C Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2687-S.SNP.4:16551540 chr04:016551540 0 W/16551540-16551540 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.938601;DP=4320;DP4=1997,2118,6,14;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0;MQB=0.00129838;MQSB=0.487382;RPB=0.589052;SGB=61.9006;VDB=0.222025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.4:16555722 chr04:016555722 0 W/16555722-16555722 FN3967-S SNP T -> C AC=1;AN=182;BQB=0.970342;DP=3002;DP4=1408,1494,16,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=2.33164e-09;MQSB=0.98449;RPB=0.998696;SGB=93.7308;VDB=0.604201;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L438|633|LOC_Os04g28040|protein_coding|CODING|LOC_Os04g28040.1|4|1) FN3846-S.SNP.4:16559906 chr04:016559906 0 W/16559906-16559906 FN3846-S SNP T -> C AC=1;AN=190;BQB=0.883148;DP=2642;DP4=1260,1320,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.000491466;MQSB=0.0432132;RPB=0.719162;SGB=30.8803;VDB=0.0510515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.4:16561644 chr04:016561644 0 W/16561644-16561644 FN2263-S SNP C -> T AC=2;AN=190;BQB=0.887153;DP=4236;DP4=1903,2037,22,16;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0;MQB=0.245109;MQSB=0.1699;RPB=0.0137682;SGB=167.496;VDB=0.0334421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.4:16596334 chr04:016596334 0 W/16596334-16596334 FN1484-S Single Base Substitution G-A INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1316-S.SNP.4:16600183 chr04:016600183 0 W/16600183-16600183 FN1316-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1292-S.SNP.4:16609268 chr04:016609268 0 W/16609268-16609268 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1660-S.SNP.4:16618361 chr04:016618361 0 W/16618361-16618361 FN1660-S Single Base Substitution C-A INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1660-S.SNP.4:16618362 chr04:016618362 0 W/16618362-16618362 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2481.SNP.4:16630420 chr04:016630420 0 W/16630420-16630420 FN2481 SNP T -> C AC=2;AN=200;BQB=0.704259;DP=4187;DP4=2067,1865,23,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.93135e-17;MQSB=0.821934;RPB=0.988265;SGB=-1.612;VDB=0.309439;EFF=INTRON(MODIFIER||||380|LOC_Os04g28160|protein_coding|CODING|LOC_Os04g28160.1|1|1) FN3774-S.SNP.4:16631573 chr04:016631573 0 W/16631573-16631573 FN3774-S SNP A -> G AC=1;AN=190;BQB=0.957125;DP=2232;DP4=982,1140,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25309e-09;MQSB=0.699474;RPB=0.410467;SGB=62.7569;VDB=0.0103227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K181R|380|LOC_Os04g28160|protein_coding|CODING|LOC_Os04g28160.1|4|1) FN1702-S.SNP.4:16635416 chr04:016635416 0 W/16635416-16635416 FN1702-S SNP T -> C AC=1;AN=188;BQB=0.24856;DP=3734;DP4=1929,1772,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.5079e-09;MQSB=0.999244;RPB=0.752614;SGB=33.7061;VDB=0.876414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.4:16641320 chr04:016641320 0 W/16641320-16641320 FN1152-S Single Base Substitution A-T INTRON HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN-294.SNP.4:16643252 chr04:016643252 0 W/16643252-16643252 FN-294 Single Base Substitution A-T INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3606-S.SNP.4:16644533 chr04:016644533 0 W/16644533-16644533 FN3606-S SNP G -> A AC=2;AN=190;BQB=0.473791;DP=3095;DP4=1167,1708,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.15347e-11;MQSB=0.99244;RPB=0.632767;SGB=49.1985;VDB=0.971026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.4:16652436 chr04:016652436 0 W/16652436-16652436 FN3930-S SNP C -> A AC=1;AN=158;BQB=0.836088;DP=2222;DP4=1096,1034,16,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.94952e-10;MQSB=0.992797;RPB=0.959478;SGB=64.3985;VDB=0.714228;EFF=INTRON(MODIFIER||||384|LOC_Os04g28190|protein_coding|CODING|LOC_Os04g28190.1|1|1) FN2265-S.SNP.4:16662340 chr04:016662340 0 W/16662340-16662340 FN2265-S SNP T -> A AC=1;AN=190;BQB=0.753731;DP=3285;DP4=1568,1306,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0;MQB=1.57631e-11;MQSB=0.0871525;RPB=0.969945;SGB=82.301;VDB=0.199641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.4:16663725 chr04:016663725 0 W/16663725-16663725 FN1550-S Single Base Substitution G-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN4128-S.SNP.4:16670364 chr04:016670364 0 W/16670364-16670364 FN4128-S SNP T -> A AC=1;AN=182;BQB=0.968794;DP=3562;DP4=1315,2123,3,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.39353e-11;MQSB=0.976076;RPB=0.0823794;SGB=80.1982;VDB=0.13095;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T157S|1034|LOC_Os04g28210|protein_coding|CODING|LOC_Os04g28210.1|2|1) FN3932-S.SNP.4:16670581 chr04:016670581 0 W/16670581-16670581 FN3932-S SNP G -> A AC=1;AN=158;BQB=0.957054;DP=2630;DP4=1237,1280,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.88134e-05;MQSB=0.995809;RPB=0.983753;SGB=25.2211;VDB=0.615769;EFF=INTRON(MODIFIER||||1034|LOC_Os04g28210|protein_coding|CODING|LOC_Os04g28210.1|1|1) FN2092-S.SNP.4:16688162 chr04:016688162 0 W/16688162-16688162 FN2092-S SNP G -> T AC=2;AN=168;BQB=0.986204;DP=2601;DP4=830,1705,10,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.82317e-23;MQSB=0.963259;RPB=0.919346;SGB=85.386;VDB=0.836735;EFF=UTR_3_PRIME(MODIFIER||598||825|LOC_Os04g28234|protein_coding|CODING|LOC_Os04g28234.1|1|1),INTRON(MODIFIER||||825|LOC_Os04g28234|protein_coding|CODING|LOC_Os04g28234.2|1|1),INTRON(MODIFIER||||792|LOC_Os04g28234|protein_coding|CODING|LOC_Os04g28234.3|2|1) FN2215-S.SNP.4:16698697 chr04:016698697 0 W/16698697-16698697 FN2215-S SNP T -> A AC=1;AN=190;BQB=0.883928;DP=4473;DP4=2061,1970,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.0777e-12;MQSB=0.160193;RPB=0.84709;SGB=85.8548;VDB=0.129568;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.4:16711835 chr04:016711835 0 W/16711835-16711835 W252-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2573-S.SNP.4:16715327 chr04:016715327 0 W/16715327-16715327 FN2573-S SNP C -> G AC=1;AN=198;BQB=0.610181;DP=4167;DP4=1723,2290,3,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000248667;MQSB=0.901473;RPB=0.786373;SGB=21.981;VDB=0.252876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.4:16721888 chr04:016721888 0 W/16721888-16721888 FN3795-S SNP A -> T AC=2;AN=190;BQB=0.0284352;DP=1969;DP4=755,1083,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.65594e-05;MQSB=0.356503;RPB=0.879697;SGB=46.6446;VDB=0.547655;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.4:16724492 chr04:016724492 0 W/16724492-16724492 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN-293.SNP.4:16730447 chr04:016730447 0 W/16730447-16730447 FN-293 Single Base Substitution A-G INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN508-S.SNP.4:16732583 chr04:016732583 0 W/16732583-16732583 FN508-S Single Base Substitution A-T INTRON HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN4105-S.SNP.4:16744949 chr04:016744949 0 W/16744949-16744949 FN4105-S SNP G -> T AC=1;AN=182;BQB=0.927736;DP=3198;DP4=1323,1798,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.17296e-08;MQSB=0.970785;RPB=0.501414;SGB=53.1331;VDB=0.222179;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.4:16745064 chr04:016745064 0 W/16745064-16745064 FN883-S Single Base Substitution C-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2163-S.SNP.4:16746019 chr04:016746019 0 W/16746019-16746019 FN2163-S SNP G -> T AC=1;AN=166;BQB=3.89104e-08;DP=2869;DP4=1152,1575,19,10;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=0.0012209;MQSB=0.264565;RPB=0.334133;SGB=-378.307;VDB=0.93617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-272.SNP.4:16747233 chr04:016747233 0 W/16747233-16747233 FN-272 Single Base Substitution C-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1459-S.SNP.4:16756311 chr04:016756311 0 W/16756311-16756311 FN1459-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN4314-S.SNP.4:16756460 chr04:016756460 0 W/16756460-16756460 FN4314-S SNP C -> G AC=1;AN=170;BQB=0.991543;DP=3097;DP4=1167,1867,6,15;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0200194;MQB=0.0553868;MQSB=2.69656e-37;RPB=0.477753;SGB=36.9825;VDB=0.625785;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tGa|S591*|844|LOC_Os04g28300|protein_coding|CODING|LOC_Os04g28300.1|3|1) FN3388-S.SNP.4:16769301 chr04:016769301 0 W/16769301-16769301 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.999505;DP=3015;DP4=1410,1439,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.77291e-06;MQSB=0.941872;RPB=0.621258;SGB=25.1826;VDB=0.973467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.4:16772008 chr04:016772008 0 W/16772008-16772008 FN2191-S SNP G -> A AC=1;AN=190;BQB=0.909353;DP=4934;DP4=2429,2182,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21063e-13;MQSB=0.648786;RPB=0.213498;SGB=68.0854;VDB=0.777428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.4:16773166 chr04:016773166 0 W/16773166-16773166 FN2130-S SNP G -> T AC=1;AN=168;BQB=0.376928;DP=4002;DP4=2130,1834,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04396e-08;MQSB=0.965283;RPB=0.517402;SGB=-16.665;VDB=0.314737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.4:16780429 chr04:016780429 0 W/16780429-16780429 FN2314 SNP T -> A AC=1;AN=192;BQB=0.242513;DP=5085;DP4=2634,2180,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.50665e-07;MQSB=0.999905;RPB=0.378615;SGB=-81.3174;VDB=0.202154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.4:16780429 chr04:016780429 0 W/16780429-16780429 FN3673-S SNP T -> A AC=1;AN=190;BQB=0.95822;DP=3146;DP4=1858,1198,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.00273e-06;MQSB=0.690158;RPB=0.501856;SGB=-2.10437;VDB=0.12391;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.4:16781499 chr04:016781499 0 W/16781499-16781499 FN-288 Single Base Substitution C-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1039-S.SNP.4:16785967 chr04:016785967 0 W/16785967-16785967 FN1039-S Single Base Substitution T-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1555-S.SNP.4:16787705 chr04:016787705 0 W/16787705-16787705 FN1555-S Single Base Substitution T-C INTERGENIC Homo SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1104-S.SNP.4:16788040 chr04:016788040 0 W/16788040-16788040 FN1104-S Single Base Substitution A-G INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN433-S.SNP.4:16790836 chr04:016790836 0 W/16790836-16790836 FN433-S Single Base Substitution A-C INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN3985-S.SNP.4:16799117 chr04:016799117 0 W/16799117-16799117 FN3985-S SNP A -> T AC=1;AN=168;BQB=0.994182;DP=2579;DP4=1298,1183,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.07105e-10;MQSB=0.992194;RPB=0.87902;SGB=51.902;VDB=0.00196934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.4:16799161 chr04:016799161 0 W/16799161-16799161 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.426333;DP=4550;DP4=2463,1770,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.52983e-12;MQSB=0.987538;RPB=0.486875;SGB=-40.6893;VDB=0.484357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.4:16799533 chr04:016799533 0 W/16799533-16799533 FN2788-S SNP G -> C AC=1;AN=198;BQB=0.860495;DP=4709;DP4=2130,2207,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.12798e-13;MQSB=0.854425;RPB=0.967921;SGB=100.095;VDB=0.168938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.4:16800770 chr04:016800770 0 W/16800770-16800770 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.996294;DP=2975;DP4=1620,1273,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2066e-12;MQSB=0.883898;RPB=0.989753;SGB=60.7873;VDB=0.948317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.4:16800835 chr04:016800835 0 W/16800835-16800835 FN3502-S SNP A -> G AC=1;AN=188;BQB=0.999625;DP=2799;DP4=1560,1172,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.67123e-09;MQSB=0.897836;RPB=0.54595;SGB=58.0655;VDB=0.934783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.4:16805408 chr04:016805408 0 W/16805408-16805408 FN2361 SNP C -> T AC=1;AN=192;BQB=0.0907817;DP=5051;DP4=2130,2401,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02841e-08;MQSB=0.999712;RPB=0.223613;SGB=-63.0652;VDB=0.23771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.4:16805902 chr04:016805902 0 W/16805902-16805902 FN-35 Single Base Substitution G-A INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN3865-S.SNP.4:16806431 chr04:016806431 0 W/16806431-16806431 FN3865-S SNP A -> G AC=1;AN=158;BQB=0.836292;DP=2491;DP4=1063,1262,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.11906e-06;MQSB=0.751468;RPB=0.700117;SGB=27.3346;VDB=0.39524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.4:16807881 chr04:016807881 0 W/16807881-16807881 FN2480 SNP G -> A AC=1;AN=200;BQB=0.406289;DP=3853;DP4=1768,1740,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8302e-07;MQSB=0.974687;RPB=0.267924;SGB=49.6594;VDB=0.254982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E126K|207|LOC_Os04g28410|protein_coding|CODING|LOC_Os04g28410.1|1|1) FN3450-S.SNP.4:16808729 chr04:016808729 0 W/16808729-16808729 FN3450-S SNP T -> C AC=1;AN=184;BQB=0.876603;DP=2710;DP4=1073,1537,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.87848e-07;MQSB=0.886175;RPB=0.997709;SGB=39.2697;VDB=0.935097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.4:16810597 chr04:016810597 0 W/16810597-16810597 FN3416-S SNP C -> A AC=1;AN=184;BQB=0.834505;DP=2946;DP4=1369,1468,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.13827e-06;MQSB=0.917808;RPB=0.739061;SGB=35.1773;VDB=0.148759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.4:16812167 chr04:016812167 0 W/16812167-16812167 FN3312-S SNP C -> A AC=1;AN=184;BQB=0.979086;DP=3535;DP4=2043,1352,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.74126e-09;MQSB=0.961247;RPB=0.0761941;SGB=71.3514;VDB=0.00598682;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.4:16820297 chr04:016820297 0 W/16820297-16820297 FN1687-S SNP A -> G AC=1;AN=188;BQB=0.57765;DP=4007;DP4=1845,2094,6,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.74973e-16;MQSB=0.830341;RPB=0.129358;SGB=108.042;VDB=0.0751763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.4:16824835 chr04:016824835 0 W/16824835-16824835 FN1399-S Single Base Substitution C-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-335.SNP.4:16827767 chr04:016827767 0 W/16827767-16827767 FN-335 Single Base Substitution G-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN510-S.SNP.4:16831416 chr04:016831416 0 W/16831416-16831416 FN510-S Single Base Substitution C-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3978-S.SNP.4:16832190 chr04:016832190 0 W/16832190-16832190 FN3978-S SNP A -> G AC=1;AN=168;BQB=0.931379;DP=2218;DP4=1127,928,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22358e-07;MQSB=0.954618;RPB=0.992076;SGB=19.7539;VDB=0.94699;EFF=INTRON(MODIFIER||||195|LOC_Os04g28440|protein_coding|CODING|LOC_Os04g28440.1|1|1) FN3771-S.SNP.4:16835939 chr04:016835939 0 W/16835939-16835939 FN3771-S SNP T -> A AC=1;AN=190;BQB=0.99638;DP=2608;DP4=1342,1167,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00435e-05;MQSB=0.95974;RPB=0.917507;SGB=39.9877;VDB=0.936695;EFF=INTRON(MODIFIER||||149|LOC_Os04g28450|protein_coding|CODING|LOC_Os04g28450.1|1|1) FN806-S.SNP.4:16836478 chr04:016836478 0 W/16836478-16836478 FN806-S Single Base Substitution C-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN2300.SNP.4:16841488 chr04:016841488 0 W/16841488-16841488 FN2300 SNP G -> A AC=1;AN=192;BQB=0.572416;DP=4492;DP4=2079,2200,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.85881e-12;MQSB=0.929074;RPB=0.983667;SGB=36.607;VDB=0.685184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.4:16855260 chr04:016855260 0 W/16855260-16855260 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.938648;DP=2878;DP4=1343,1448,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.7253e-13;MQSB=0.758339;RPB=0.936179;SGB=60.9777;VDB=0.304938;EFF=INTRON(MODIFIER||||803|LOC_Os04g28460|protein_coding|CODING|LOC_Os04g28460.1|2|1) FN726-S.SNP.4:16855668 chr04:016855668 0 W/16855668-16855668 FN726-S Single Base Substitution A-G INTRON HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2715-S.SNP.4:16859431 chr04:016859431 0 W/16859431-16859431 FN2715-S SNP C -> A AC=1;AN=200;BQB=0.91213;DP=4608;DP4=2289,2047,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13802e-06;MQSB=0.939684;RPB=0.970502;SGB=43.8747;VDB=0.321554;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.4:16865661 chr04:016865661 0 W/16865661-16865661 FN721-S Single Base Substitution C-T INTRON HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2332.SNP.4:16869946 chr04:016869946 0 W/16869946-16869946 FN2332 SNP G -> A AC=1;AN=192;BQB=0.939553;DP=4788;DP4=2425,2121,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04927e-14;MQSB=0.784282;RPB=0.0427693;SGB=57.1218;VDB=0.417826;EFF=INTRON(MODIFIER||||648|LOC_Os04g28480|protein_coding|CODING|LOC_Os04g28480.1|1|1),INTRON(MODIFIER||||648|LOC_Os04g28480|protein_coding|CODING|LOC_Os04g28480.2|1|1) FN3799-S.SNP.4:16873381 chr04:016873381 0 W/16873381-16873381 FN3799-S SNP C -> T AC=2;AN=190;BQB=0.408822;DP=2612;DP4=1198,1336,14,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.57305e-10;MQSB=0.984804;RPB=0.973317;SGB=13.4344;VDB=0.855678;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.4:16873381 chr04:016873381 0 W/16873381-16873381 FN3861-S SNP C -> T AC=1;AN=158;BQB=0.992697;DP=2384;DP4=1097,1217,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.5752e-08;MQSB=0.918073;RPB=0.25355;SGB=51.4366;VDB=0.162805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.4:16876224 chr04:016876224 0 W/16876224-16876224 FN3058-S SNP T -> A AC=1;AN=184;BQB=0.591619;DP=2608;DP4=1193,1161,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60757e-07;MQSB=0.693888;RPB=0.133839;SGB=38.4058;VDB=0.0282844;EFF=INTRON(MODIFIER||||50|LOC_Os04g28490|protein_coding|CODING|LOC_Os04g28490.1|1|1) FN1112-S.SNP.4:16881513 chr04:016881513 0 W/16881513-16881513 FN1112-S Single Base Substitution A-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN983-S.SNP.4:16886263 chr04:016886263 0 W/16886263-16886263 FN983-S Single Base Substitution C-T INTRON HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2097-S.SNP.4:16888061 chr04:016888061 0 W/16888061-16888061 FN2097-S SNP A -> T AC=1;AN=166;BQB=0.311951;DP=2298;DP4=380,1877,3,18;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=5.95755e-08;MQSB=0.983586;RPB=0.855853;SGB=-64.9298;VDB=0.0198201;EFF=INTRON(MODIFIER||||443|LOC_Os04g28520|protein_coding|CODING|LOC_Os04g28520.1|5|1),INTRON(MODIFIER||||391|LOC_Os04g28520|protein_coding|CODING|LOC_Os04g28520.2|5|1) W674-4-1.SNP.4:16895764 chr04:016895764 0 W/16895764-16895764 W674-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN-256.SNP.4:16897834 chr04:016897834 0 W/16897834-16897834 FN-256 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g28530 expressed protein SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2415.SNP.4:16897990 chr04:016897990 0 W/16897990-16897990 FN2415 SNP C -> G AC=2;AN=200;BQB=0.993315;DP=2910;DP4=1052,1612,5,10;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=0.000111359;MQSB=7.3297e-18;RPB=0.809183;SGB=43.8747;VDB=0.819218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.4:16906017 chr04:016906017 0 W/16906017-16906017 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.991682;DP=5245;DP4=2512,2484,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.7173e-14;MQSB=0.963918;RPB=0.966608;SGB=104.921;VDB=0.16388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G679E|685|LOC_Os04g28550|protein_coding|CODING|LOC_Os04g28550.1|4|1) FN2242-S.SNP.4:16908047 chr04:016908047 0 W/16908047-16908047 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.996083;DP=3924;DP4=1650,1971,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00280326;MQB=3.44774e-11;MQSB=0.947618;RPB=0.609626;SGB=-284.282;VDB=0.0719424;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1546|1607|LOC_Os04g28560|protein_coding|CODING|LOC_Os04g28560.1|6|1) FN2218-S.SNP.4:16909327 chr04:016909327 0 W/16909327-16909327 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.996807;DP=4445;DP4=2006,2061,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000224972;MQB=7.003e-09;MQSB=0.577139;RPB=0.999552;SGB=85.5263;VDB=0.383186;EFF=INTRON(MODIFIER||||1607|LOC_Os04g28560|protein_coding|CODING|LOC_Os04g28560.1|3|1) FN2218-S.SNP.4:16914119 chr04:016914119 0 W/16914119-16914119 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.987339;DP=5220;DP4=2152,2553,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.02913e-12;MQSB=0.997823;RPB=0.7423;SGB=75.1932;VDB=0.652896;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.4:16917956 chr04:016917956 0 W/16917956-16917956 FN-249 Single Base Substitution T-C INTERGENIC HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN961-S.SNP.4:16931935 chr04:016931935 0 W/16931935-16931935 FN961-S Single Base Substitution T-G SPLICE_SITE_REGION HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN593-S.SNP.4:16932510 chr04:016932510 0 W/16932510-16932510 FN593-S Single Base Substitution C-A INTRON HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2708-S.SNP.4:16935597 chr04:016935597 0 W/16935597-16935597 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.983699;DP=4597;DP4=2375,1998,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.77983e-13;MQSB=0.761387;RPB=0.574894;SGB=86.5007;VDB=0.080746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.4:16936020 chr04:016936020 0 W/16936020-16936020 FN1438-S Single Base Substitution A-C INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN-157.SNP.4:16937916 chr04:016937916 0 W/16937916-16937916 FN-157 Single Base Substitution C-T INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.4:16937919 chr04:016937919 0 W/16937919-16937919 FN-157 Single Base Substitution A-G INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2754-S.SNP.4:16940965 chr04:016940965 0 W/16940965-16940965 FN2754-S SNP A -> G AC=1;AN=200;BQB=0.776079;DP=4813;DP4=2250,2397,5,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00103885;MQB=1.26755e-11;MQSB=0.866486;RPB=0.0505369;SGB=58.2954;VDB=0.132321;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.4:16940965 chr04:016940965 0 W/16940965-16940965 FN942-S Single Base Substitution A-G INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN-71.SNP.4:16942573 chr04:016942573 0 W/16942573-16942573 FN-71 Single Base Substitution T-C INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-208.SNP.4:16945193 chr04:016945193 0 W/16945193-16945193 FN-208 Single Base Substitution T-A INTERGENIC HOMO SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN1339-S.SNP.4:16949636 chr04:016949636 0 W/16949636-16949636 FN1339-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g28620 male sterility protein, putative, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN1339-S.SNP.4:16951232 chr04:016951232 0 W/16951232-16951232 FN1339-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g28620 male sterility protein, putative, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN1416-S.SNP.4:16958490 chr04:016958490 0 W/16958490-16958490 FN1416-S Single Base Substitution A-C INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN2357.SNP.4:16963265 chr04:016963265 0 W/16963265-16963265 FN2357 SNP C -> T AC=2;AN=192;BQB=0.98467;DP=4750;DP4=2451,2054,14,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000210526;MQB=3.21136e-14;MQSB=0.877028;RPB=0.457418;SGB=117.676;VDB=0.369836;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.4:16965101 chr04:016965101 0 W/16965101-16965101 FN1561-S Single Base Substitution A-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1029-S.SNP.4:16971269 chr04:016971269 0 W/16971269-16971269 FN1029-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g28650 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-11.SNP.4:16977461 chr04:016977461 0 W/16977461-16977461 FN-11 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os04g28650 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2582-S.SNP.4:16979689 chr04:016979689 0 W/16979689-16979689 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.266019;DP=4617;DP4=2441,1974,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00454841;MQB=6.45415e-07;MQSB=0.279097;RPB=0.36085;SGB=63.3342;VDB=0.051161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.4:16980654 chr04:016980654 0 W/16980654-16980654 FN1684-S SNP G -> A AC=2;AN=188;BQB=0.24529;DP=2164;DP4=1336,776,16,9;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.0596118;MQB=0.65853;MQSB=0;RPB=0.935335;SGB=-10.1101;VDB=0.362354;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.4:16982770 chr04:016982770 0 W/16982770-16982770 FN791-S Single Base Substitution C-T INTERGENIC HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2640-S.SNP.4:16986652 chr04:016986652 0 W/16986652-16986652 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.984519;DP=5065;DP4=2535,2158,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.50261e-13;MQSB=0.801924;RPB=0.788992;SGB=19.1209;VDB=0.433364;EFF=INTRON(MODIFIER||||141|LOC_Os04g28680|protein_coding|CODING|LOC_Os04g28680.1|1|1) FN804-S.SNP.4:16990451 chr04:016990451 0 W/16990451-16990451 FN804-S Single Base Substitution G-C INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2529-S.SNP.4:16991194 chr04:016991194 0 W/16991194-16991194 FN2529-S SNP A -> T AC=1;AN=198;BQB=0.999681;DP=4239;DP4=2208,1832,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.53486e-05;MQSB=0.956511;RPB=0.962237;SGB=26.5745;VDB=0.134494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.4:16992374 chr04:016992374 0 W/16992374-16992374 FN2547-S SNP G -> T AC=1;AN=198;BQB=0.982181;DP=3960;DP4=1782,1979,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.96436e-07;MQSB=0.767356;RPB=0.997794;SGB=25.7687;VDB=0.522432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.4:16999862 chr04:016999862 0 W/16999862-16999862 FN2080-S SNP T -> G AC=1;AN=168;BQB=0.0362296;DP=4059;DP4=2010,2001,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.80754e-13;MQSB=0.928107;RPB=0.172888;SGB=-45.1967;VDB=0.329353;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.4:17000884 chr04:017000884 0 W/17000884-17000884 FN4176-S SNP T -> A AC=2;AN=170;BQB=0.830507;DP=2098;DP4=1034,947,8,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.10567e-09;MQSB=0.977716;RPB=0.222791;SGB=56.7575;VDB=0.0919636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.4:17006703 chr04:017006703 0 W/17006703-17006703 FN1624-S Single Base Substitution T-C INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN3454-S.SNP.4:17021306 chr04:017021306 0 W/17021306-17021306 FN3454-S SNP C -> T AC=1;AN=184;BQB=0.927061;DP=2589;DP4=1233,1272,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.58443e-06;MQSB=0.993823;RPB=0.575368;SGB=35.1773;VDB=0.265581;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.4:17021915 chr04:017021915 0 W/17021915-17021915 FN911-S Single Base Substitution T-C INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2335.SNP.4:17024796 chr04:017024796 0 W/17024796-17024796 FN2335 SNP C -> T AC=1;AN=192;BQB=0.999989;DP=4994;DP4=2498,2207,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37315e-11;MQSB=0.994705;RPB=0.925379;SGB=8.91915;VDB=0.116657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.4:17027153 chr04:017027153 0 W/17027153-17027153 FN3674-S SNP A -> T AC=1;AN=190;BQB=0.801081;DP=3182;DP4=1460,1637,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.05203e-07;MQSB=0.971078;RPB=0.738959;SGB=32.5467;VDB=0.685471;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.4:17028477 chr04:017028477 0 W/17028477-17028477 FN_798-4-2 Single Base Substitution C-T HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN2124-S.SNP.4:17030747 chr04:017030747 0 W/17030747-17030747 FN2124-S SNP C -> A AC=1;AN=168;BQB=0.132497;DP=2906;DP4=1741,1111,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.18006e-05;MQSB=0.995177;RPB=0.943157;SGB=5.62151;VDB=0.596295;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.4:17030810 chr04:017030810 0 W/17030810-17030810 FN-105 Single Base Substitution G-T INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN805-S.SNP.4:17043762 chr04:017043762 0 W/17043762-17043762 FN805-S Single Base Substitution A-G INTERGENIC HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2192-S.SNP.4:17045114 chr04:017045114 0 W/17045114-17045114 FN2192-S SNP A -> G AC=1;AN=190;BQB=0.8639;DP=4704;DP4=2023,2343,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.34178e-10;MQSB=0.911208;RPB=0.974642;SGB=57.4238;VDB=0.291672;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N260S|817|LOC_Os04g28780|protein_coding|CODING|LOC_Os04g28780.1|1|1) FN1376-S.SNP.4:17050793 chr04:017050793 0 W/17050793-17050793 FN1376-S Single Base Substitution G-T INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN714-S.SNP.4:17052098 chr04:017052098 0 W/17052098-17052098 FN714-S Single Base Substitution G-C SPLICE_SITE_REGION HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. W423-5-1.SNP.4:17054331 chr04:017054331 0 W/17054331-17054331 W423-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN1302-S.SNP.4:17055212 chr04:017055212 0 W/17055212-17055212 FN1302-S Single Base Substitution G-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1693-S.SNP.4:17056925 chr04:017056925 0 W/17056925-17056925 FN1693-S SNP T -> G AC=1;AN=188;BQB=0.00863195;DP=2678;DP4=1561,1045,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0141799;MQSB=0.868099;RPB=0.371373;SGB=-74.1569;VDB=0.861425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.4:17058719 chr04:017058719 0 W/17058719-17058719 FN3560-S SNP A -> G AC=2;AN=188;BQB=0.686744;DP=3335;DP4=1873,1334,14,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.64979e-09;MQSB=0.241529;RPB=0.935413;SGB=98.9552;VDB=0.601347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.4:17059809 chr04:017059809 0 W/17059809-17059809 FN2708-S SNP G -> T AC=1;AN=200;BQB=0.103275;DP=4757;DP4=1987,2520,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06571e-10;MQSB=0.985796;RPB=0.999604;SGB=81.8956;VDB=0.231713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.4:17067924 chr04:017067924 0 W/17067924-17067924 FN2688-S SNP T -> A AC=1;AN=200;BQB=0.12773;DP=4936;DP4=2417,2323,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46901e-09;MQSB=0.9927;RPB=0.878114;SGB=3.06925;VDB=0.616856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N673Y|1768|LOC_Os04g28820|protein_coding|CODING|LOC_Os04g28820.1|6|1) FN2688-S.SNP.4:17067935 chr04:017067935 0 W/17067935-17067935 FN2688-S SNP T -> C AC=1;AN=200;BQB=0.817334;DP=4927;DP4=2496,2263,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05048e-07;MQSB=0.998415;RPB=0.768475;SGB=40.4492;VDB=0.929401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q669R|1768|LOC_Os04g28820|protein_coding|CODING|LOC_Os04g28820.1|6|1) FN-54.SNP.4:17070485 chr04:017070485 0 W/17070485-17070485 FN-54 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN-279.SNP.4:17074289 chr04:017074289 0 W/17074289-17074289 FN-279 Single Base Substitution T-C INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2649-S.SNP.4:17075214 chr04:017075214 0 W/17075214-17075214 FN2649-S SNP T -> A AC=1;AN=200;BQB=0.441515;DP=4950;DP4=2679,2060,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.72646e-16;MQSB=0.933124;RPB=0.530247;SGB=109.527;VDB=0.330308;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.4:17076030 chr04:017076030 0 W/17076030-17076030 FN4179-S SNP G -> C AC=1;AN=170;BQB=0.771703;DP=1898;DP4=1023,754,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.67044e-07;MQSB=0.015029;RPB=0.0935296;SGB=47.8722;VDB=0.18368;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.4:17081042 chr04:017081042 0 W/17081042-17081042 FN1563-S Single Base Substitution T-C INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1076-S.SNP.4:17086786 chr04:017086786 0 W/17086786-17086786 FN1076-S Single Base Substitution C-T INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2546-S.SNP.4:17091062 chr04:017091062 0 W/17091062-17091062 FN2546-S SNP G -> T AC=1;AN=198;BQB=0.548178;DP=3796;DP4=1853,1782,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14175e-06;MQSB=0.879017;RPB=0.416085;SGB=11.1786;VDB=0.534486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.4:17099346 chr04:017099346 0 W/17099346-17099346 FN3362-S SNP G -> A AC=2;AN=184;BQB=0.936729;DP=2768;DP4=1243,1256,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.45462e-18;MQSB=0.99307;RPB=0.154766;SGB=25.0638;VDB=0.373812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.4:17099353 chr04:017099353 0 W/17099353-17099353 FN3362-S SNP T -> A AC=2;AN=184;BQB=0.973751;DP=2736;DP4=1334,1246,8,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.1644e-15;MQSB=0.950049;RPB=0.5312;SGB=81.5311;VDB=0.385675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.4:17112737 chr04:017112737 0 W/17112737-17112737 FN1097-S Single Base Substitution A-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN990-S.SNP.4:17113073 chr04:017113073 0 W/17113073-17113073 FN990-S Single Base Substitution C-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN3464-S.SNP.4:17120455 chr04:017120455 0 W/17120455-17120455 FN3464-S SNP G -> A AC=2;AN=184;BQB=0.999985;DP=3662;DP4=1572,1990,15,17;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00273075;MQB=2.40208e-08;MQSB=0.0633451;RPB=0.219474;SGB=102.662;VDB=0.0402879;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W539*|1527|LOC_Os04g28880|protein_coding|CODING|LOC_Os04g28880.1|5|1);LOF=(LOC_Os04g28880|LOC_Os04g28880|1|1.00);NMD=(LOC_Os04g28880|LOC_Os04g28880|1|1.00) FN2412.SNP.4:17123845 chr04:017123845 0 W/17123845-17123845 FN2412 SNP G -> A AC=1;AN=200;BQB=0.965714;DP=4528;DP4=2250,2088,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220848;MQB=0.000303318;MQSB=0.152434;RPB=0.902462;SGB=35.8441;VDB=0.159195;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q16|228|LOC_Os04g28890|protein_coding|CODING|LOC_Os04g28890.1|1|1) FN_772-3-1.SNP.4:17127512 chr04:017127512 0 W/17127512-17127512 FN_772-3-1 Single Base Substitution C-T Homo LOC_Os04g28900 retrotransposon protein, putative, unclassified, expressed SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2195-S.SNP.4:17130192 chr04:017130192 0 W/17130192-17130192 FN2195-S SNP G -> C AC=2;AN=190;BQB=0.884013;DP=4888;DP4=2131,2176,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.77173e-20;MQSB=0.375669;RPB=0.982606;SGB=92.6144;VDB=0.125512;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.4:17131111 chr04:017131111 0 W/17131111-17131111 FN861-S Single Base Substitution C-A INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN2663-S.SNP.4:17135403 chr04:017135403 0 W/17135403-17135403 FN2663-S SNP G -> A AC=1;AN=200;BQB=0.999981;DP=4535;DP4=2029,2302,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91641e-14;MQSB=0.92574;RPB=0.998926;SGB=52.9314;VDB=0.281021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1070-S.SNP.4:17138507 chr04:017138507 0 W/17138507-17138507 FN1070-S Single Base Substitution C-T INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2663-S.SNP.4:17138586 chr04:017138586 0 W/17138586-17138586 FN2663-S SNP A -> G AC=1;AN=200;BQB=0.914093;DP=4948;DP4=2403,2221,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.583e-19;MQSB=0.920581;RPB=0.914118;SGB=-41.6328;VDB=0.748441;EFF=INTRON(MODIFIER||||726|LOC_Os04g28910|protein_coding|CODING|LOC_Os04g28910.1|1|1) FN351-S.SNP.4:17139212 chr04:017139212 0 W/17139212-17139212 FN351-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g28910 retrotransposon protein, putative, unclassified, expressed SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN660-S.SNP.4:17139521 chr04:017139521 0 W/17139521-17139521 FN660-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g28910 retrotransposon protein, putative, unclassified, expressed SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN957-S.SNP.4:17144231 chr04:017144231 0 W/17144231-17144231 FN957-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g28920 retrotransposon protein, putative, unclassified, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1688-S.SNP.4:17145082 chr04:017145082 0 W/17145082-17145082 FN1688-S SNP G -> A AC=2;AN=188;BQB=0.0271758;DP=2791;DP4=1113,1638,12,14;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0587603;MQB=0.00217276;MQSB=1.20862e-05;RPB=0.978344;SGB=-40.1048;VDB=0.183222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V291M|477|LOC_Os04g28920|protein_coding|CODING|LOC_Os04g28920.1|1|1) FN3863-S.SNP.4:17147081 chr04:017147081 0 W/17147081-17147081 FN3863-S SNP G -> T AC=1;AN=158;BQB=0.425037;DP=2110;DP4=865,1141,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.14455;MQB=0.510771;MQSB=0;RPB=0.593562;SGB=38.3284;VDB=0.570414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.4:17151487 chr04:017151487 0 W/17151487-17151487 FN2686-S SNP G -> A AC=1;AN=200;BQB=0.774467;DP=4559;DP4=2189,2137,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36394e-06;MQSB=0.198289;RPB=0.942443;SGB=40.4492;VDB=0.7858;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V10I|624|LOC_Os04g28930|protein_coding|CODING|LOC_Os04g28930.1|1|1) FN2260-S.SNP.4:17155976 chr04:017155976 0 W/17155976-17155976 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.0339965;DP=4318;DP4=2333,1675,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21697e-05;MQSB=0.446504;RPB=0.99969;SGB=49.0954;VDB=0.00481151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A281V|708|LOC_Os04g28940|protein_coding|CODING|LOC_Os04g28940.1|4|1),SPLICE_SITE_REGION(LOW||||708|LOC_Os04g28940|protein_coding|CODING|LOC_Os04g28940.1|4|1) FN1606-S.SNP.4:17156330 chr04:017156330 0 W/17156330-17156330 FN1606-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os04g28940 retrotransposon protein, putative, unclassified, expressed SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN395-S.SNP.4:17156985 chr04:017156985 0 W/17156985-17156985 FN395-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g28940 retrotransposon protein, putative, unclassified, expressed SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3286-S.SNP.4:17157655 chr04:017157655 0 W/17157655-17157655 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.938437;DP=2907;DP4=1512,1282,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04413e-11;MQSB=0.969691;RPB=0.993288;SGB=75.8731;VDB=0.940682;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.4:17164097 chr04:017164097 0 W/17164097-17164097 FN671-S Single Base Substitution T-G INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2794-S.SNP.4:17165365 chr04:017165365 0 W/17165365-17165365 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.944299;DP=3638;DP4=1679,1788,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.5346e-07;MQSB=0.91014;RPB=0.969259;SGB=49.5489;VDB=0.246406;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.4:17166679 chr04:017166679 0 W/17166679-17166679 FN1025-S Single Base Substitution G-T INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3325-S.SNP.4:17170376 chr04:017170376 0 W/17170376-17170376 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.211249;DP=2968;DP4=1439,1428,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.33029e-05;MQSB=0.942669;RPB=0.837115;SGB=15.7097;VDB=0.872139;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.4:17171017 chr04:017171017 0 W/17171017-17171017 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN838-S.SNP.4:17173761 chr04:017173761 0 W/17173761-17173761 FN838-S Single Base Substitution G-A INTRON HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN1016-S.SNP.4:17174834 chr04:017174834 0 W/17174834-17174834 FN1016-S Single Base Substitution C-T INTRON HOMO SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN3712-S.SNP.4:17175040 chr04:017175040 0 W/17175040-17175040 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.924871;DP=2728;DP4=1221,1395,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6612e-08;MQSB=0.996362;RPB=0.292206;SGB=53.6492;VDB=0.07625;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.4:17175882 chr04:017175882 0 W/17175882-17175882 FN472-S Single Base Substitution C-T INTERGENIC HOMO SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN1515-S.SNP.4:17177776 chr04:017177776 0 W/17177776-17177776 FN1515-S Single Base Substitution A-G INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2581-S.SNP.4:17182367 chr04:017182367 0 W/17182367-17182367 FN2581-S SNP G -> C AC=2;AN=198;BQB=0.928955;DP=3487;DP4=1742,1582,15,9;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=3.48e-09;MQSB=0.0346537;RPB=0.611607;SGB=76.1002;VDB=0.763751;EFF=INTRON(MODIFIER||||332|LOC_Os04g28990|protein_coding|CODING|LOC_Os04g28990.1|3|1) FN1466-S.SNP.4:17184290 chr04:017184290 0 W/17184290-17184290 FN1466-S Single Base Substitution T-C INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN419-S.SNP.4:17195218 chr04:017195218 0 W/17195218-17195218 FN419-S Single Base Substitution G-C INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN889-S.SNP.4:17196123 chr04:017196123 0 W/17196123-17196123 FN889-S Single Base Substitution G-T INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN906-S.SNP.4:17204763 chr04:017204763 0 W/17204763-17204763 FN906-S Single Base Substitution C-A INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN1150-S.SNP.4:17206586 chr04:017206586 0 W/17206586-17206586 FN1150-S Single Base Substitution T-C INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN4036-S.SNP.4:17207390 chr04:017207390 0 W/17207390-17207390 FN4036-S SNP G -> A AC=1;AN=168;BQB=0.999498;DP=4216;DP4=1930,2155,5,20;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.14018;MQB=0.352002;MQSB=4.17478e-37;RPB=0.939791;SGB=75.9177;VDB=0.829791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.4:17224984 chr04:017224984 0 W/17224984-17224984 FN2108-S SNP C -> T AC=2;AN=168;BQB=0.788648;DP=2316;DP4=690,1548,7,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.43579e-10;MQSB=0.963091;RPB=0.830573;SGB=-11.0644;VDB=0.822985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.4:17226901 chr04:017226901 0 W/17226901-17226901 FN1317-S Single Base Substitution C-T INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1484-S.SNP.4:17227246 chr04:017227246 0 W/17227246-17227246 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN4139-S.SNP.4:17231388 chr04:017231388 0 W/17231388-17231388 FN4139-S SNP G -> A AC=1;AN=170;BQB=0.936233;DP=2286;DP4=1257,951,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.66542e-06;MQSB=0.958331;RPB=0.738363;SGB=43.4296;VDB=0.496362;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.4:17235393 chr04:017235393 0 W/17235393-17235393 FN2181-S SNP A -> T AC=1;AN=190;BQB=0.899687;DP=5117;DP4=2551,1844,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7256e-11;MQSB=0.969909;RPB=0.872499;SGB=18.096;VDB=0.809898;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.4:17236445 chr04:017236445 0 W/17236445-17236445 FN-291 Single Base Substitution C-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN4108-S.SNP.4:17237915 chr04:017237915 0 W/17237915-17237915 FN4108-S SNP A -> G AC=1;AN=182;BQB=0.924132;DP=3265;DP4=1424,1728,8,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.33517e-07;MQSB=0.795931;RPB=0.864086;SGB=39.6007;VDB=0.0168017;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.4:17239576 chr04:017239576 0 W/17239576-17239576 FN4040-S SNP G -> C AC=1;AN=168;BQB=0.990062;DP=2772;DP4=1430,1254,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.40886e-06;MQSB=0.984361;RPB=0.221163;SGB=24.4556;VDB=0.676781;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.4:17251170 chr04:017251170 0 W/17251170-17251170 W42-1-3S-1 Single Base Substitution C-G INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN4081-S.SNP.4:17252347 chr04:017252347 0 W/17252347-17252347 FN4081-S SNP T -> G AC=2;AN=182;BQB=0.952849;DP=2888;DP4=1695,1119,9,12;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=1.2589e-12;MQSB=0.0120391;RPB=0.991648;SGB=89.2199;VDB=0.759281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.4:17254891 chr04:017254891 0 W/17254891-17254891 FN3459-S SNP T -> C AC=1;AN=184;BQB=0.975407;DP=2617;DP4=1414,1119,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.53125e-05;MQSB=0.851312;RPB=0.724397;SGB=35.1773;VDB=0.358583;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.4:17258547 chr04:017258547 0 W/17258547-17258547 FN-56 Single Base Substitution T-A INTERGENIC HOMO SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN3924-S.SNP.4:17260534 chr04:017260534 0 W/17260534-17260534 FN3924-S SNP G -> A AC=2;AN=158;BQB=0.910128;DP=2924;DP4=1066,1693,14,27;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.57045e-24;MQSB=0.979377;RPB=0.991598;SGB=128.418;VDB=0.118549;EFF=INTRON(MODIFIER||||662|LOC_Os04g29090|protein_coding|CODING|LOC_Os04g29090.1|1|1) FN3356-S.SNP.4:17265973 chr04:017265973 0 W/17265973-17265973 FN3356-S SNP C -> G AC=1;AN=184;BQB=0.146001;DP=2755;DP4=1198,1457,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.10643e-05;MQSB=0.921796;RPB=0.997025;SGB=20.7533;VDB=0.998225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.4:17266156 chr04:017266156 0 W/17266156-17266156 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.827236;DP=3682;DP4=1877,1751,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.03189e-06;MQSB=0.998704;RPB=0.182609;SGB=19.7539;VDB=0.0891378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.4:17269715 chr04:017269715 0 W/17269715-17269715 FN3925-S SNP C -> T AC=1;AN=158;BQB=0.436578;DP=2114;DP4=1141,878,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0170293;MQB=0.479149;MQSB=8.12331e-09;RPB=0.66504;SGB=77.6532;VDB=0.27482;EFF=INTRON(MODIFIER||||119|LOC_Os04g29100|protein_coding|CODING|LOC_Os04g29100.1|1|1) FN3998-S.SNP.4:17270175 chr04:017270175 0 W/17270175-17270175 FN3998-S SNP G -> A AC=2;AN=168;BQB=0.986157;DP=2153;DP4=1105,936,13,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000464468;MQB=5.0044e-13;MQSB=0.0654047;RPB=0.866825;SGB=75.9177;VDB=0.996565;EFF=INTRON(MODIFIER||||119|LOC_Os04g29100|protein_coding|CODING|LOC_Os04g29100.1|1|1) FN318-S.SNP.4:17277359 chr04:017277359 0 W/17277359-17277359 FN318-S Single Base Substitution G-T INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1718-S.SNP.4:17280235 chr04:017280235 0 W/17280235-17280235 FN1718-S SNP C -> T AC=2;AN=188;BQB=0.607884;DP=2296;DP4=1173,1086,14,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.1724e-09;MQSB=0.94728;RPB=0.834538;SGB=16.3413;VDB=0.542486;EFF=INTRON(MODIFIER||||283|LOC_Os04g29120|protein_coding|CODING|LOC_Os04g29120.1|1|1) FN-47.SNP.4:17297947 chr04:017297947 0 W/17297947-17297947 FN-47 Single Base Substitution C-A INTRON Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN-97.SNP.4:17297947 chr04:017297947 0 W/17297947-17297947 FN-97 Single Base Substitution C-A INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1445-S.SNP.4:17297947 chr04:017297947 0 W/17297947-17297947 FN1445-S Single Base Substitution C-A INTRON HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2463.SNP.4:17297947 chr04:017297947 0 W/17297947-17297947 FN2463 SNP C -> A AC=1;AN=200;BQB=0.0448756;DP=4336;DP4=2142,1707,13,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00207565;MQB=4.37739e-10;MQSB=0.633397;RPB=0.910916;SGB=-68.0744;VDB=0.431767;EFF=INTRON(MODIFIER||||499|LOC_Os04g29180|protein_coding|CODING|LOC_Os04g29180.1|2|1) FN2592-S.SNP.4:17297947 chr04:017297947 0 W/17297947-17297947 FN2592-S SNP C -> A AC=2;AN=198;BQB=0.896226;DP=3818;DP4=1836,1614,22,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00288109;MQB=5.72512e-19;MQSB=0.917822;RPB=0.576557;SGB=-0.148023;VDB=0.747438;EFF=INTRON(MODIFIER||||499|LOC_Os04g29180|protein_coding|CODING|LOC_Os04g29180.1|2|1) FN4176-S.SNP.4:17301911 chr04:017301911 0 W/17301911-17301911 FN4176-S SNP C -> A AC=2;AN=170;BQB=0.889587;DP=2764;DP4=1458,1222,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.58178e-13;MQSB=0.93902;RPB=0.970744;SGB=87.856;VDB=0.595689;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P6T|1230|LOC_Os04g29190|protein_coding|CODING|LOC_Os04g29190.1|1|1) FN4176-S.SNP.4:17301912 chr04:017301912 0 W/17301912-17301912 FN4176-S SNP C -> A AC=2;AN=170;BQB=0.907353;DP=2773;DP4=1478,1229,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.79675e-13;MQSB=0.918981;RPB=0.988242;SGB=87.856;VDB=0.622864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P6Q|1230|LOC_Os04g29190|protein_coding|CODING|LOC_Os04g29190.1|1|1) FN3712-S.SNP.4:17304870 chr04:017304870 0 W/17304870-17304870 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.523517;DP=2998;DP4=1251,1538,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0203469;MQB=0.000353192;MQSB=3.27956e-10;RPB=0.456658;SGB=13.4442;VDB=0.893556;EFF=INTRON(MODIFIER||||1230|LOC_Os04g29190|protein_coding|CODING|LOC_Os04g29190.1|3|1) FN3712-S.SNP.4:17304891 chr04:017304891 0 W/17304891-17304891 FN3712-S SNP T -> A AC=1;AN=190;BQB=0.223779;DP=3033;DP4=1338,1591,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.016815;MQB=0.000196398;MQSB=1.9819e-08;RPB=0.944337;SGB=32.5467;VDB=0.966662;EFF=INTRON(MODIFIER||||1230|LOC_Os04g29190|protein_coding|CODING|LOC_Os04g29190.1|3|1) FN224-S.SNP.4:17307068 chr04:017307068 0 W/17307068-17307068 FN224-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g29190 retrotransposon protein, putative, unclassified, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN224-S.SNP.4:17307069 chr04:017307069 0 W/17307069-17307069 FN224-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g29190 retrotransposon protein, putative, unclassified, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN2765-S.SNP.4:17307235 chr04:017307235 0 W/17307235-17307235 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.958697;DP=3888;DP4=1837,1868,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000257202;MQB=1.41168e-05;MQSB=0.118002;RPB=0.976179;SGB=16.3688;VDB=0.118129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R641L|1230|LOC_Os04g29190|protein_coding|CODING|LOC_Os04g29190.1|5|1) FN2483.SNP.4:17310287 chr04:017310287 0 W/17310287-17310287 FN2483 SNP G -> T AC=2;AN=200;BQB=0.308216;DP=5094;DP4=2176,2507,21,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.75452e-24;MQSB=0.811594;RPB=0.996491;SGB=62.4605;VDB=0.441153;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.4:17314302 chr04:017314302 0 W/17314302-17314302 FN2392 SNP T -> A AC=1;AN=200;BQB=0.93691;DP=4396;DP4=2198,1696,15,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00272975;MQB=2.83514e-09;MQSB=6.81648e-06;RPB=0.705564;SGB=47.7211;VDB=0.751226;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.4:17317021 chr04:017317021 0 W/17317021-17317021 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1579-S.SNP.4:17318637 chr04:017318637 0 W/17318637-17318637 FN1579-S Single Base Substitution T-C INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1276-S.SNP.4:17323104 chr04:017323104 0 W/17323104-17323104 FN1276-S Single Base Substitution G-C INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1745-S.SNP.4:17323104 chr04:017323104 0 W/17323104-17323104 FN1745-S SNP G -> C AC=2;AN=188;BQB=0.115039;DP=4254;DP4=1887,2298,23,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.92153e-24;MQSB=0.977036;RPB=0.0989918;SGB=-114.344;VDB=0.00182996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.4:17323104 chr04:017323104 0 W/17323104-17323104 FN2418 SNP G -> C AC=2;AN=200;BQB=0.974021;DP=5189;DP4=2315,2546,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.62803e-17;MQSB=0.991153;RPB=0.442063;SGB=68.5625;VDB=0.281258;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.4:17323104 chr04:017323104 0 W/17323104-17323104 FN733-S Single Base Substitution G-C INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN3502-S.SNP.4:17328039 chr04:017328039 0 W/17328039-17328039 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.974716;DP=2638;DP4=1525,1038,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.29558e-09;MQSB=0.155777;RPB=0.158469;SGB=67.1521;VDB=0.0238761;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.4:17328357 chr04:017328357 0 W/17328357-17328357 FN402-S Single Base Substitution A-T INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN229-S.SNP.4:17332057 chr04:017332057 0 W/17332057-17332057 FN229-S Single Base Substitution C-T INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN928-S.SNP.4:17334314 chr04:017334314 0 W/17334314-17334314 FN928-S Single Base Substitution G-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2540-S.SNP.4:17336572 chr04:017336572 0 W/17336572-17336572 FN2540-S SNP C -> T AC=2;AN=198;BQB=0.549872;DP=4287;DP4=1705,2210,14,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.39508e-17;MQSB=0.588333;RPB=0.992024;SGB=-4.90898;VDB=0.539813;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.4:17339276 chr04:017339276 0 W/17339276-17339276 FN3514-S SNP C -> T AC=2;AN=188;BQB=0.937213;DP=3547;DP4=1843,1567,19,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.02832e-17;MQSB=0.523132;RPB=0.427793;SGB=158.018;VDB=0.768601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.4:17339352 chr04:017339352 0 W/17339352-17339352 FN-392 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2285.SNP.4:17347245 chr04:017347245 0 W/17347245-17347245 FN2285 SNP G -> T AC=1;AN=192;BQB=0.92568;DP=5071;DP4=2516,2223,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0001972;MQB=1.00184e-13;MQSB=0.988413;RPB=0.601332;SGB=90.2896;VDB=0.573484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.4:17347246 chr04:017347246 0 W/17347246-17347246 FN2285 SNP A -> T AC=1;AN=192;BQB=0.828573;DP=5069;DP4=2231,2187,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.56776e-15;MQSB=0.96837;RPB=0.836082;SGB=-40.12;VDB=0.419988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.4:17349534 chr04:017349534 0 W/17349534-17349534 FN3563-S SNP C -> T AC=1;AN=188;BQB=0.953311;DP=4059;DP4=2112,1854,19,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.96037e-18;MQSB=0.982139;RPB=0.556903;SGB=110.393;VDB=0.4242;EFF=INTRON(MODIFIER||||1463|LOC_Os04g29270|protein_coding|CODING|LOC_Os04g29270.1|2|1) FN4112-S.SNP.4:17354142 chr04:017354142 0 W/17354142-17354142 FN4112-S SNP A -> T AC=1;AN=182;BQB=9.03432e-07;DP=3118;DP4=1458,1499,4,22;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0173188;MQB=6.02412e-05;MQSB=0.592002;RPB=0.838178;SGB=20.2582;VDB=0.846336;EFF=INTRON(MODIFIER||||1463|LOC_Os04g29270|protein_coding|CODING|LOC_Os04g29270.1|8|1) FN1375-S.SNP.4:17356532 chr04:017356532 0 W/17356532-17356532 FN1375-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN817-S.SNP.4:17360811 chr04:017360811 0 W/17360811-17360811 FN817-S Single Base Substitution A-T INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN817-S.SNP.4:17360812 chr04:017360812 0 W/17360812-17360812 FN817-S Single Base Substitution A-T INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN817-S.SNP.4:17360813 chr04:017360813 0 W/17360813-17360813 FN817-S Single Base Substitution G-T INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN1211-S.SNP.4:17366307 chr04:017366307 0 W/17366307-17366307 FN1211-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g29290 retrotransposon protein, putative, unclassified SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN925-S.SNP.4:17367449 chr04:017367449 0 W/17367449-17367449 FN925-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g29290 retrotransposon protein, putative, unclassified SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN4130-S.SNP.4:17370383 chr04:017370383 0 W/17370383-17370383 FN4130-S SNP T -> C AC=1;AN=182;BQB=0.971537;DP=3003;DP4=1491,1441,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=2.07191e-08;MQSB=0.46304;RPB=0.847803;SGB=39.1386;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.4:17370665 chr04:017370665 0 W/17370665-17370665 FN-128 Single Base Substitution A-G INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN-11.SNP.4:17372163 chr04:017372163 0 W/17372163-17372163 FN-11 Single Base Substitution G-A INTERGENIC Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-14.SNP.4:17377827 chr04:017377827 0 W/17377827-17377827 FN-14 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os04g29310 retrotransposon protein, putative, unclassified, expressed SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-179.SNP.4:17379999 chr04:017379999 0 W/17379999-17379999 FN-179 Single Base Substitution T-C INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3834-S.SNP.4:17380560 chr04:017380560 0 W/17380560-17380560 FN3834-S SNP T -> G AC=2;AN=190;BQB=0.978582;DP=2485;DP4=949,1408,7,13;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0028169;MQB=6.29101e-06;MQSB=0.31884;RPB=0.423785;SGB=85.5263;VDB=0.158213;EFF=INTRON(MODIFIER||||1410|LOC_Os04g29310|protein_coding|CODING|LOC_Os04g29310.1|11|1) FN_776-5-1.SNP.4:17385778 chr04:017385778 0 W/17385778-17385778 FN_776-5-1 Single Base Substitution T-G HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN4165-S.SNP.4:17390417 chr04:017390417 0 W/17390417-17390417 FN4165-S SNP G -> A AC=1;AN=170;BQB=0.980337;DP=2545;DP4=1376,1092,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.12089e-06;MQSB=0.955163;RPB=0.98293;SGB=38.987;VDB=0.741871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.4:17392719 chr04:017392719 0 W/17392719-17392719 FN2350 SNP T -> C AC=1;AN=192;BQB=0.857447;DP=4628;DP4=2451,1856,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.97399e-19;MQSB=0.984705;RPB=0.912071;SGB=35.5131;VDB=0.217194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.4:17396541 chr04:017396541 0 W/17396541-17396541 FN2408 SNP T -> A AC=1;AN=200;BQB=0.477278;DP=4202;DP4=1426,2544,4,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.58264e-07;MQSB=0.751987;RPB=0.6223;SGB=47.4799;VDB=0.704295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.4:17399728 chr04:017399728 0 W/17399728-17399728 FN3316-S SNP C -> T AC=1;AN=184;BQB=0.953169;DP=3128;DP4=1480,1571,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000319693;MQB=8.96566e-06;MQSB=0.980702;RPB=0.440373;SGB=44.2207;VDB=0.317696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.4:17400085 chr04:017400085 0 W/17400085-17400085 FN2582-S SNP C -> A AC=1;AN=198;BQB=0.973555;DP=3841;DP4=2031,1606,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.66962e-07;MQSB=0.99926;RPB=0.716374;SGB=24.1541;VDB=0.449634;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.4:17403397 chr04:017403397 0 W/17403397-17403397 FN4135-S SNP C -> G AC=2;AN=182;BQB=0.961011;DP=2950;DP4=1469,1374,15,13;HOB=0.0217365;ICB=0.494567;MQ=37;MQ0F=0.0281356;MQB=0.254792;MQSB=8.83963e-05;RPB=0.945449;SGB=88.2906;VDB=0.84165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.4:17405105 chr04:017405105 0 W/17405105-17405105 FN3845-S SNP A -> G AC=1;AN=190;BQB=0.983601;DP=2824;DP4=1288,1444,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00637394;MQB=0.00928083;MQSB=0.233389;RPB=0.835928;SGB=49.0954;VDB=0.872842;EFF=INTRON(MODIFIER||||1641|LOC_Os04g29330|protein_coding|CODING|LOC_Os04g29330.1|2|1) FN429-S.SNP.4:17407611 chr04:017407611 0 W/17407611-17407611 FN429-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g29330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-298.SNP.4:17409938 chr04:017409938 0 W/17409938-17409938 FN-298 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g29330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3298-S.SNP.4:17410509 chr04:017410509 0 W/17410509-17410509 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.963283;DP=2967;DP4=1508,1350,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.016852;MQB=0.751151;MQSB=0.992175;RPB=0.989626;SGB=10.6662;VDB=0.0313847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R1508H|1641|LOC_Os04g29330|protein_coding|CODING|LOC_Os04g29330.1|4|1) FN2449.SNP.4:17411885 chr04:017411885 0 W/17411885-17411885 FN2449 SNP T -> A AC=2;AN=200;BQB=0.0459364;DP=4043;DP4=2003,1433,18,5;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.67791e-06;MQSB=0.98717;RPB=0.9748;SGB=-10.0844;VDB=0.451564;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.4:17412042 chr04:017412042 0 W/17412042-17412042 FN-192 Single Base Substitution G-A INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2275-S.SNP.4:17413893 chr04:017413893 0 W/17413893-17413893 FN2275-S SNP C -> T AC=1;AN=190;BQB=0.939448;DP=4922;DP4=2241,2246,36,23;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0142219;MQB=1.61929e-09;MQSB=0.0161142;RPB=0.283597;SGB=-54.6155;VDB=0.0319312;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.4:17414566 chr04:017414566 0 W/17414566-17414566 FN1519-S Single Base Substitution T-C INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN785-S.SNP.4:17416904 chr04:017416904 0 W/17416904-17416904 FN785-S Single Base Substitution C-A INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2106-S.SNP.4:17418942 chr04:017418942 0 W/17418942-17418942 FN2106-S SNP C -> T AC=1;AN=166;BQB=0.640709;DP=3533;DP4=1855,1637,13,11;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=5.28987e-09;MQSB=0.999776;RPB=0.417282;SGB=-41.2125;VDB=0.759737;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.4:17419778 chr04:017419778 0 W/17419778-17419778 FN-200 Single Base Substitution G-A INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN2487.SNP.4:17420572 chr04:017420572 0 W/17420572-17420572 FN2487 SNP A -> T AC=1;AN=200;BQB=0.551174;DP=4647;DP4=1996,2370,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.649e-10;MQSB=0.921579;RPB=0.756231;SGB=68.0801;VDB=0.991194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.4:17422665 chr04:017422665 0 W/17422665-17422665 FN2366 SNP A -> G AC=2;AN=192;BQB=0.254745;DP=5280;DP4=2562,2464,20,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000189394;MQB=1.1309e-22;MQSB=0.754992;RPB=0.918509;SGB=93.0226;VDB=0.358747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.4:17423502 chr04:017423502 0 W/17423502-17423502 FN2239-S SNP T -> G AC=1;AN=190;BQB=0.292958;DP=4686;DP4=2039,2370,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000213402;MQB=3.35122e-12;MQSB=0.610046;RPB=0.278338;SGB=36.4291;VDB=0.0718299;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.4:17425201 chr04:017425201 0 W/17425201-17425201 FN921-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g29350 retrotransposon protein, putative, unclassified, expressed SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN3460-S.SNP.4:17427874 chr04:017427874 0 W/17427874-17427874 FN3460-S SNP T -> C AC=2;AN=184;BQB=0.786766;DP=2376;DP4=1125,1120,9,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.88988e-07;MQSB=0.686279;RPB=0.805301;SGB=49.835;VDB=0.528391;EFF=INTRON(MODIFIER||||1345|LOC_Os04g29350|protein_coding|CODING|LOC_Os04g29350.1|9|1) FN318-S.SNP.4:17429330 chr04:017429330 0 W/17429330-17429330 FN318-S Single Base Substitution T-G INTRON HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN_546-3-1.SNP.4:17431235 chr04:017431235 0 W/17431235-17431235 FN_546-3-1 Single Base Substitution C-T HET LOC_Os04g29350 retrotransposon protein, putative, unclassified, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1422-S.SNP.4:17434177 chr04:017434177 0 W/17434177-17434177 FN1422-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g29350 retrotransposon protein, putative, unclassified, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3492-S.SNP.4:17436984 chr04:017436984 0 W/17436984-17436984 FN3492-S SNP C -> T AC=2;AN=184;BQB=0.931337;DP=2507;DP4=1293,1139,9,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.44263e-12;MQSB=0.982887;RPB=0.897096;SGB=80.3949;VDB=0.583639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R51H|1345|LOC_Os04g29350|protein_coding|CODING|LOC_Os04g29350.1|1|1) FN677-S.SNP.4:17439088 chr04:017439088 0 W/17439088-17439088 FN677-S Single Base Substitution G-A INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3730-S.SNP.4:17445823 chr04:017445823 0 W/17445823-17445823 FN3730-S SNP C -> A AC=1;AN=190;BQB=0.99365;DP=2331;DP4=892,1339,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.01624e-09;MQSB=0.0213796;RPB=0.754463;SGB=99.1879;VDB=0.279289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.4:17447082 chr04:017447082 0 W/17447082-17447082 FN2650-S SNP C -> G AC=1;AN=200;BQB=0.983263;DP=5206;DP4=2583,2310,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57679e-10;MQSB=0.618412;RPB=0.544941;SGB=29.4849;VDB=0.773785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgC|W489C|540|LOC_Os04g29360|protein_coding|CODING|LOC_Os04g29360.1|5|1) FN1453-S.SNP.4:17450760 chr04:017450760 0 W/17450760-17450760 FN1453-S Single Base Substitution C-T INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2621-S.SNP.4:17454290 chr04:017454290 0 W/17454290-17454290 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.861456;DP=5196;DP4=2421,2476,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21677e-18;MQSB=0.216887;RPB=0.981195;SGB=63.3521;VDB=0.947154;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.4:17456180 chr04:017456180 0 W/17456180-17456180 W453-3-1 Single Base Substitution A-C INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2275-S.SNP.4:17456279 chr04:017456279 0 W/17456279-17456279 FN2275-S SNP T -> A AC=1;AN=190;BQB=0.459281;DP=4357;DP4=1911,2118,15,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19991e-21;MQSB=0.664189;RPB=0.837576;SGB=162.942;VDB=0.292038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.4:17461317 chr04:017461317 0 W/17461317-17461317 FN1528-S Single Base Substitution A-T INTRON Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN-131.SNP.4:17467806 chr04:017467806 0 W/17467806-17467806 FN-131 Single Base Substitution T-A INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN507-S.SNP.4:17468197 chr04:017468197 0 W/17468197-17468197 FN507-S Single Base Substitution C-T INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-202.SNP.4:17468756 chr04:017468756 0 W/17468756-17468756 FN-202 Single Base Substitution G-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2284.SNP.4:17470440 chr04:017470440 0 W/17470440-17470440 FN2284 SNP C -> A AC=1;AN=192;BQB=0.965647;DP=4769;DP4=2166,2230,19,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.29463e-18;MQSB=0.996784;RPB=0.646757;SGB=-5.17475;VDB=0.951783;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.4:17470864 chr04:017470864 0 W/17470864-17470864 W278-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3834-S.SNP.4:17473067 chr04:017473067 0 W/17473067-17473067 FN3834-S SNP A -> G AC=2;AN=190;BQB=0.625304;DP=2850;DP4=1550,1191,19,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.62351e-13;MQSB=0.99985;RPB=0.809392;SGB=117.403;VDB=0.526782;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.4:17474634 chr04:017474634 0 W/17474634-17474634 FN794-S Single Base Substitution G-A INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1299-S.SNP.4:17477823 chr04:017477823 0 W/17477823-17477823 FN1299-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g29400 hypothetical protein SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2121-S.SNP.4:17482200 chr04:017482200 0 W/17482200-17482200 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.999569;DP=3163;DP4=1914,1216,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.54555e-10;MQSB=0.99996;RPB=0.0455981;SGB=34.3388;VDB=0.642078;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.4:17482551 chr04:017482551 0 W/17482551-17482551 FN1156-XA21 Single Base Substitution A-G INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN631-S.SNP.4:17490895 chr04:017490895 0 W/17490895-17490895 FN631-S Single Base Substitution T-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-197.SNP.4:17494702 chr04:017494702 0 W/17494702-17494702 FN-197 Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN631-S.SNP.4:17494887 chr04:017494887 0 W/17494887-17494887 FN631-S Single Base Substitution C-T INTRON HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2110-S.SNP.4:17498023 chr04:017498023 0 W/17498023-17498023 FN2110-S SNP A -> T AC=2;AN=168;BQB=0.894456;DP=3733;DP4=1890,1767,24,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4243e-28;MQSB=0.915225;RPB=0.850275;SGB=175.411;VDB=0.974352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.4:17501809 chr04:017501809 0 W/17501809-17501809 FN-214 Single Base Substitution T-C INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1512-S.SNP.4:17503578 chr04:017503578 0 W/17503578-17503578 FN1512-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os04g29440 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3606-S.SNP.4:17514982 chr04:017514982 0 W/17514982-17514982 FN3606-S SNP T -> C AC=1;AN=190;BQB=0.724108;DP=2861;DP4=1466,1298,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.08366e-09;MQSB=0.996114;RPB=0.920548;SGB=71.8647;VDB=0.463632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.4:17518990 chr04:017518990 0 W/17518990-17518990 FN2609-S SNP C -> G AC=1;AN=198;BQB=0.422376;DP=3952;DP4=2048,1696,17,6;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.00885628;MQB=0.00171881;MQSB=4.15818e-38;RPB=0.977132;SGB=72.5051;VDB=0.67201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L365V|2360|LOC_Os04g29469|protein_coding|CODING|LOC_Os04g29469.1|3|1) FN502-S.SNP.4:17519364 chr04:017519364 0 W/17519364-17519364 FN502-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN-195.SNP.4:17520264 chr04:017520264 0 W/17520264-17520264 FN-195 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g29469 retrotransposon protein, putative, unclassified, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN712-S.SNP.4:17524063 chr04:017524063 0 W/17524063-17524063 FN712-S Single Base Substitution C-T INTRON HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2199-S.SNP.4:17530990 chr04:017530990 0 W/17530990-17530990 FN2199-S SNP C -> A AC=2;AN=190;BQB=0.853444;DP=4777;DP4=2087,2381,18,24;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.00753611;MQB=1.57322e-08;MQSB=0.142782;RPB=0.413671;SGB=92.6144;VDB=0.93134;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.4:17536308 chr04:017536308 0 W/17536308-17536308 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.941889;DP=3404;DP4=1349,1996,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.052879;MQB=0.238287;MQSB=8.18759e-20;RPB=0.330825;SGB=56.7575;VDB=0.696731;EFF=INTERGENIC(MODIFIER||||||||||1) FN-31.SNP.4:17542498 chr04:017542498 0 W/17542498-17542498 FN-31 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g29530 retrotransposon protein, putative, unclassified, expressed SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN-31.SNP.4:17542499 chr04:017542499 0 W/17542499-17542499 FN-31 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN2420.SNP.4:17544827 chr04:017544827 0 W/17544827-17544827 FN2420 SNP C -> T AC=2;AN=200;BQB=0.993086;DP=4673;DP4=2020,2278,15,34;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000213995;MQB=9.51408e-12;MQSB=2.90287e-10;RPB=0.697153;SGB=220.051;VDB=0.0763939;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A260|929|LOC_Os04g29530|protein_coding|CODING|LOC_Os04g29530.1|3|1) FN1480-S.SNP.4:17551913 chr04:017551913 0 W/17551913-17551913 FN1480-S Single Base Substitution C-T INTERGENIC Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2309.SNP.4:17556348 chr04:017556348 0 W/17556348-17556348 FN2309 SNP A -> T AC=1;AN=192;BQB=0.99844;DP=4835;DP4=2147,2409,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.12197e-07;MQSB=0.00874277;RPB=0.990002;SGB=10.4835;VDB=0.987655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.4:17565953 chr04:017565953 0 W/17565953-17565953 FN3903-S SNP T -> C AC=1;AN=158;BQB=0.993225;DP=3103;DP4=1359,1607,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0;MQB=4.29351e-05;MQSB=0.258128;RPB=0.947454;SGB=64.5449;VDB=0.197841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.4:17573573 chr04:017573573 0 W/17573573-17573573 FN3956-S SNP G -> A AC=2;AN=168;BQB=0.865826;DP=1966;DP4=983,851,13,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.92492e-10;MQSB=0.817906;RPB=0.544145;SGB=75.9177;VDB=0.144006;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.4:17573885 chr04:017573885 0 W/17573885-17573885 FN4122-S SNP C -> A AC=1;AN=182;BQB=0.98927;DP=3496;DP4=2108,1290,13,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.11157e-08;MQSB=0.954737;RPB=0.966738;SGB=75.6874;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.4:17576238 chr04:017576238 0 W/17576238-17576238 FN1466-S Single Base Substitution G-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. W23-2-1.SNP.4:17587285 chr04:017587285 0 W/17587285-17587285 W23-2-1 Single Base Substitution T-A INTRON HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-140.SNP.4:17589906 chr04:017589906 0 W/17589906-17589906 FN-140 Single Base Substitution T-C INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1458-S.SNP.4:17597885 chr04:017597885 0 W/17597885-17597885 FN1458-S Single Base Substitution T-G INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1036-S.SNP.4:17598189 chr04:017598189 0 W/17598189-17598189 FN1036-S Single Base Substitution G-A INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN3467-S.SNP.4:17599232 chr04:017599232 0 W/17599232-17599232 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.713211;DP=3295;DP4=1751,1463,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0391502;MQB=0.729178;MQSB=7.89334e-13;RPB=0.891408;SGB=60.4004;VDB=0.571602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.4:17599973 chr04:017599973 0 W/17599973-17599973 FN2649-S SNP T -> A AC=2;AN=200;BQB=0.39965;DP=4815;DP4=2396,2140,31,28;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=4.18646e-21;MQSB=0.134034;RPB=0.717796;SGB=138.902;VDB=0.748182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.4:17624590 chr04:017624590 0 W/17624590-17624590 FN1445-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN518-S.SNP.4:17624857 chr04:017624857 0 W/17624857-17624857 FN518-S Single Base Substitution G-T INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN1458-S.SNP.4:17630114 chr04:017630114 0 W/17630114-17630114 FN1458-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1394-S.SNP.4:17631122 chr04:017631122 0 W/17631122-17631122 FN1394-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2661-S.SNP.4:17637119 chr04:017637119 0 W/17637119-17637119 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.999247;DP=5094;DP4=2580,2209,13,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00157048;MQB=5.49731e-10;MQSB=8.47305e-05;RPB=0.482877;SGB=76.3213;VDB=0.594814;EFF=INTRON(MODIFIER||||557|LOC_Os04g29630|protein_coding|CODING|LOC_Os04g29630.1|2|1) W674-4-1.SNP.4:17637443 chr04:017637443 0 W/17637443-17637443 W674-4-1 Single Base Substitution G-A INTRON HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3630-S.SNP.4:17637585 chr04:017637585 0 W/17637585-17637585 FN3630-S SNP A -> G AC=1;AN=190;BQB=0.933071;DP=2527;DP4=1347,1062,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.015829;MQB=0.928445;MQSB=8.52745e-16;RPB=0.475659;SGB=36.1006;VDB=0.240536;EFF=INTRON(MODIFIER||||557|LOC_Os04g29630|protein_coding|CODING|LOC_Os04g29630.1|1|1) FN2676-S.SNP.4:17637753 chr04:017637753 0 W/17637753-17637753 FN2676-S SNP C -> A AC=1;AN=200;BQB=0.79778;DP=4971;DP4=2504,2230,6,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.000204373;MQSB=0.790231;RPB=0.999451;SGB=36.6644;VDB=0.540608;EFF=INTRON(MODIFIER||||557|LOC_Os04g29630|protein_coding|CODING|LOC_Os04g29630.1|1|1) FN-163.SNP.4:17640103 chr04:017640103 0 W/17640103-17640103 FN-163 Single Base Substitution G-C INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2338.SNP.4:17642224 chr04:017642224 0 W/17642224-17642224 FN2338 SNP C -> T AC=1;AN=192;BQB=0.557157;DP=4996;DP4=2414,2285,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=6.79337e-05;MQSB=0.229967;RPB=0.892478;SGB=49.4287;VDB=0.8903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.4:17645433 chr04:017645433 0 W/17645433-17645433 FN-281 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g29650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN_N1-130-1.SNP.4:17645433 chr04:017645433 0 W/17645433-17645433 FN_N1-130-1 Single Base Substitution C-T Homo LOC_Os04g29650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2650-S.SNP.4:17649591 chr04:017649591 0 W/17649591-17649591 FN2650-S SNP A -> G AC=1;AN=200;BQB=0.860013;DP=5031;DP4=2297,2491,15,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000198768;MQB=7.78263e-16;MQSB=0.96317;RPB=0.808675;SGB=30.3571;VDB=0.646759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N1056D|1065|LOC_Os04g29650|protein_coding|CODING|LOC_Os04g29650.1|7|1) FN-313.SNP.4:17652934 chr04:017652934 0 W/17652934-17652934 FN-313 Single Base Substitution C-T INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN3287-S.SNP.4:17662219 chr04:017662219 0 W/17662219-17662219 FN3287-S SNP C -> G AC=1;AN=184;BQB=0.982672;DP=2865;DP4=1444,1315,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.21109e-06;MQSB=0.996115;RPB=0.747498;SGB=66.8296;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.4:17667347 chr04:017667347 0 W/17667347-17667347 FN1345-S Single Base Substitution A-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1003-S.SNP.4:17674137 chr04:017674137 0 W/17674137-17674137 FN1003-S Single Base Substitution G-A INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN2122-S.SNP.4:17674414 chr04:017674414 0 W/17674414-17674414 FN2122-S SNP G -> T AC=1;AN=168;BQB=0.745258;DP=2983;DP4=1968,967,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.88642e-10;MQSB=0.152581;RPB=0.196281;SGB=9.91396;VDB=0.124831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.4:17674415 chr04:017674415 0 W/17674415-17674415 FN2122-S SNP G -> T AC=1;AN=168;BQB=0.862916;DP=2974;DP4=1953,975,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.3115e-09;MQSB=0.192679;RPB=0.311311;SGB=9.91396;VDB=0.175312;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN-160 Single Base Substitution G-A INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN-165.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN-165 Single Base Substitution G-A INTERGENIC HOMO SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN-397.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN-397 Single Base Substitution G-A INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1136-19-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN1136-19-S Single Base Substitution G-A INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1136-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN1136-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3374-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN3374-S SNP G -> A AC=2;AN=184;BQB=0.894742;DP=2956;DP4=1496,1306,18,28;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.5103e-24;MQSB=0.993083;RPB=0.833009;SGB=169.508;VDB=0.474872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN3489-S SNP G -> A AC=1;AN=184;BQB=0.666542;DP=2753;DP4=1408,1225,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.47104e-06;MQSB=0.884334;RPB=0.694674;SGB=35.7479;VDB=0.763952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.912291;DP=2311;DP4=889,1303,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19248e-07;MQSB=0.429192;RPB=0.692953;SGB=49.0954;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.907471;DP=2413;DP4=1154,1149,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95344e-08;MQSB=0.816628;RPB=0.851559;SGB=53.6492;VDB=0.435615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN4068-S SNP G -> A AC=2;AN=182;BQB=0.8138;DP=2671;DP4=1197,1359,13,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.56085e-18;MQSB=0.871213;RPB=0.99653;SGB=129.818;VDB=0.636725;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN654-S Single Base Substitution G-A INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN801-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN801-S Single Base Substitution G-A INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN851-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN851-S Single Base Substitution G-A INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN889-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN889-S Single Base Substitution G-A INTERGENIC HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN918-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN918-S Single Base Substitution G-A INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN982-S.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN982-S Single Base Substitution G-A INTERGENIC HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN_N1-119-1.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 FN_N1-119-1 Single Base Substitution G-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. W423-5-1.SNP.4:17676636 chr04:017676636 0 W/17676636-17676636 W423-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN783-S.SNP.4:17680358 chr04:017680358 0 W/17680358-17680358 FN783-S Single Base Substitution G-A INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN-234.SNP.4:17682770 chr04:017682770 0 W/17682770-17682770 FN-234 Single Base Substitution G-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2500.SNP.4:17684521 chr04:017684521 0 W/17684521-17684521 FN2500 SNP C -> A AC=1;AN=200;BQB=0.618373;DP=3523;DP4=1898,1254,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.58318e-08;MQSB=0.549027;RPB=0.843578;SGB=40.2696;VDB=0.197354;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.4:17685013 chr04:017685013 0 W/17685013-17685013 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2754-S.SNP.4:17687619 chr04:017687619 0 W/17687619-17687619 FN2754-S SNP G -> C AC=1;AN=200;BQB=0.988507;DP=4988;DP4=2309,2372,4,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0254611;MQB=0.031606;MQSB=0.127307;RPB=0.940885;SGB=25.849;VDB=0.332599;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgG|R1210|1523|LOC_Os04g29700|protein_coding|CODING|LOC_Os04g29700.1|3|1) FN-233.SNP.4:17688251 chr04:017688251 0 W/17688251-17688251 FN-233 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g29700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN-295.SNP.4:17691540 chr04:017691540 0 W/17691540-17691540 FN-295 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g29700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3875-S.SNP.4:17694464 chr04:017694464 0 W/17694464-17694464 FN3875-S SNP G -> A AC=1;AN=158;BQB=0.833864;DP=2176;DP4=1096,969,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.42575e-07;MQSB=0.450425;RPB=0.135108;SGB=51.4366;VDB=0.522346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.4:17696887 chr04:017696887 0 W/17696887-17696887 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.975492;DP=4083;DP4=1823,2017,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.34898e-12;MQSB=0.9728;RPB=0.694516;SGB=72.5051;VDB=0.792107;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.4:17699660 chr04:017699660 0 W/17699660-17699660 FN-65 Single Base Substitution C-T INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN618-S.SNP.4:17700988 chr04:017700988 0 W/17700988-17700988 FN618-S Single Base Substitution C-A INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN2191-S.SNP.4:17701642 chr04:017701642 0 W/17701642-17701642 FN2191-S SNP G -> T AC=1;AN=190;BQB=0.770036;DP=4889;DP4=2532,2022,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.56295e-13;MQSB=0.941891;RPB=0.639151;SGB=78.7471;VDB=0.486463;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.4:17702900 chr04:017702900 0 W/17702900-17702900 FN594-S Single Base Substitution C-T INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1693-S.SNP.4:17714037 chr04:017714037 0 W/17714037-17714037 FN1693-S SNP T -> G AC=1;AN=188;BQB=0.0722617;DP=3746;DP4=1988,1722,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23987e-06;MQSB=0.993898;RPB=0.447145;SGB=-61.9025;VDB=0.669556;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.4:17721704 chr04:017721704 0 W/17721704-17721704 FN401-S Single Base Substitution A-G INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN3422-S.SNP.4:17815792 chr04:017815792 0 W/17815792-17815792 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.903113;DP=2560;DP4=1603,885,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=1.11883e-06;MQSB=0.0393016;RPB=0.515084;SGB=44.2207;VDB=0.113567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.4:17881345 chr04:017881345 0 W/17881345-17881345 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.351182;DP=2217;DP4=1073,1027,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00045106;MQB=0.00886234;MQSB=0.00177222;RPB=0.937986;SGB=44.5415;VDB=5.72409e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.4:17882013 chr04:017882013 0 W/17882013-17882013 FN-222 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g29970 expressed protein SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-286.SNP.4:17891636 chr04:017891636 0 W/17891636-17891636 FN-286 Single Base Substitution T-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2657-S.SNP.4:17895489 chr04:017895489 0 W/17895489-17895489 FN2657-S SNP G -> T AC=1;AN=200;BQB=0.277065;DP=4787;DP4=2266,2250,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28955e-17;MQSB=0.981703;RPB=0.872731;SGB=97.9523;VDB=0.911205;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.4:18035782 chr04:018035782 0 W/18035782-18035782 FN510-S Single Base Substitution C-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2345.SNP.4:18041479 chr04:018041479 0 W/18041479-18041479 FN2345 SNP C -> G AC=1;AN=192;BQB=0.8439;DP=8172;DP4=4256,3511,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=3.43368e-12;MQSB=0.974984;RPB=0.228272;SGB=86.1165;VDB=0.0130287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.4:18043871 chr04:018043871 0 W/18043871-18043871 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.858937;DP=5171;DP4=2257,2594,10,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00270741;MQB=2.75154e-09;MQSB=0.00332538;RPB=0.842169;SGB=7.88476;VDB=0.397502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D331N|757|LOC_Os04g30240|protein_coding|CODING|LOC_Os04g30240.1|2|1) FN2121-S.SNP.4:18047482 chr04:018047482 0 W/18047482-18047482 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.0420029;DP=3618;DP4=1783,1788,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.60121e-14;MQSB=0.989562;RPB=0.797005;SGB=-10.2027;VDB=0.158623;EFF=INTRON(MODIFIER||||757|LOC_Os04g30240|protein_coding|CODING|LOC_Os04g30240.1|1|1) FN1269-S.SNP.4:18059425 chr04:018059425 0 W/18059425-18059425 FN1269-S Single Base Substitution A-G INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1040-S.SNP.4:18064987 chr04:018064987 0 W/18064987-18064987 FN1040-S Single Base Substitution T-C INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN-159.SNP.4:18067191 chr04:018067191 0 W/18067191-18067191 FN-159 Single Base Substitution T-C INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN407-S.SNP.4:18067935 chr04:018067935 0 W/18067935-18067935 FN407-S Single Base Substitution G-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN450-S.SNP.4:18071611 chr04:018071611 0 W/18071611-18071611 FN450-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1190-S.SNP.4:18071945 chr04:018071945 0 W/18071945-18071945 FN1190-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g30270 protein kinase domain containing protein, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2091-S.SNP.4:18075771 chr04:018075771 0 W/18075771-18075771 FN2091-S SNP G -> C AC=1;AN=168;BQB=0.0923283;DP=4088;DP4=2035,1975,22,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.51829e-17;MQSB=0.998354;RPB=0.0403946;SGB=-46.9043;VDB=0.433711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.4:18078571 chr04:018078571 0 W/18078571-18078571 FN1109-S Single Base Substitution A-C INTRON HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3447-S.SNP.4:18080958 chr04:018080958 0 W/18080958-18080958 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.997312;DP=3068;DP4=1554,1346,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.8888e-07;MQSB=0.97078;RPB=0.562943;SGB=35.7479;VDB=0.895408;EFF=INTRON(MODIFIER||||417|LOC_Os04g30280|protein_coding|CODING|LOC_Os04g30280.1|1|1) FN2435.SNP.4:18087458 chr04:018087458 0 W/18087458-18087458 FN2435 SNP G -> C AC=1;AN=200;BQB=0.754433;DP=4339;DP4=2158,1909,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.99931e-07;MQSB=0.998655;RPB=0.649323;SGB=45.0543;VDB=0.0228839;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S152|206|LOC_Os04g30290|protein_coding|CODING|LOC_Os04g30290.1|3|1) FN-236.SNP.4:18102285 chr04:018102285 0 W/18102285-18102285 FN-236 Single Base Substitution A-T INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3658-S.SNP.4:18102285 chr04:018102285 0 W/18102285-18102285 FN3658-S SNP A -> T AC=2;AN=190;BQB=0.479325;DP=2753;DP4=1379,1227,11,8;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.03313e-08;MQSB=0.00253541;RPB=0.811743;SGB=33.8752;VDB=0.041329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.4:18102285 chr04:018102285 0 W/18102285-18102285 FN3760-S SNP A -> T AC=1;AN=190;BQB=0.272225;DP=2347;DP4=1228,987,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=1.37107e-12;MQSB=0.00124092;RPB=0.709844;SGB=71.6393;VDB=0.310708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.4:18102285 chr04:018102285 0 W/18102285-18102285 FN3848-S SNP A -> T AC=1;AN=158;BQB=0.472214;DP=2229;DP4=1167,956,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=2.68869e-06;MQSB=0.00669009;RPB=0.227526;SGB=27.3346;VDB=0.0313562;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.4:18102285 chr04:018102285 0 W/18102285-18102285 FN678-S Single Base Substitution A-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN820-S.SNP.4:18110003 chr04:018110003 0 W/18110003-18110003 FN820-S Single Base Substitution A-G INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN820-S.SNP.4:18110004 chr04:018110004 0 W/18110004-18110004 FN820-S Single Base Substitution G-A INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN3445-S.SNP.4:18112876 chr04:018112876 0 W/18112876-18112876 FN3445-S SNP A -> G AC=1;AN=184;BQB=0.923939;DP=2300;DP4=1353,878,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35827e-08;MQSB=0.992124;RPB=0.917841;SGB=32.2261;VDB=0.261515;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.4:18116813 chr04:018116813 0 W/18116813-18116813 FN848-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3581-S.SNP.4:18120646 chr04:018120646 0 W/18120646-18120646 FN3581-S SNP A -> T AC=1;AN=190;BQB=0.97294;DP=2815;DP4=1247,1440,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0223801;MQB=3.01826e-05;MQSB=0.0116412;RPB=0.268546;SGB=38.983;VDB=0.674203;EFF=INTERGENIC(MODIFIER||||||||||1) FN-80.SNP.4:18122596 chr04:018122596 0 W/18122596-18122596 FN-80 Single Base Substitution C-G INTRON HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN1389-S.SNP.4:18124105 chr04:018124105 0 W/18124105-18124105 FN1389-S Single Base Substitution T-G INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2196-S.SNP.4:18124292 chr04:018124292 0 W/18124292-18124292 FN2196-S SNP G -> C AC=1;AN=190;BQB=0.577069;DP=4839;DP4=2260,2298,20,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.87948e-20;MQSB=0.897479;RPB=0.808464;SGB=117.84;VDB=0.931711;EFF=INTRON(MODIFIER||||489|LOC_Os04g30370|protein_coding|CODING|LOC_Os04g30370.1|1|1) FN2655-S.SNP.4:18126108 chr04:018126108 0 W/18126108-18126108 FN2655-S SNP A -> C AC=1;AN=200;BQB=0.783043;DP=3566;DP4=1059,2352,3,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00646e-09;MQSB=0.0421633;RPB=0.949511;SGB=68.0801;VDB=0.30914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K480T|489|LOC_Os04g30370|protein_coding|CODING|LOC_Os04g30370.1|2|1) FN2753-S.SNP.4:18127627 chr04:018127627 0 W/18127627-18127627 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.319835;DP=5935;DP4=2773,2705,10,11;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.169671;MQB=0.591686;MQSB=2.08124e-25;RPB=0.803732;SGB=14.3054;VDB=0.409507;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1011|1296|LOC_Os04g30380|protein_coding|CODING|LOC_Os04g30380.1|4|1) FN830-S.SNP.4:18129262 chr04:018129262 0 W/18129262-18129262 FN830-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g30380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN4221-S.SNP.4:18139934 chr04:018139934 0 W/18139934-18139934 FN4221-S SNP T -> A AC=1;AN=170;BQB=0.880809;DP=2284;DP4=1063,1183,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2821e-05;MQSB=0.904357;RPB=0.874483;SGB=38.987;VDB=0.0199125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.4:18141335 chr04:018141335 0 W/18141335-18141335 FN-73 Single Base Substitution C-G INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN3831-S.SNP.4:18143538 chr04:018143538 0 W/18143538-18143538 FN3831-S SNP C -> T AC=2;AN=190;BQB=0.758274;DP=2230;DP4=973,1177,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71595e-13;MQSB=0.890827;RPB=0.719166;SGB=78.7471;VDB=0.587992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.4:18152106 chr04:018152106 0 W/18152106-18152106 FN1504-S Single Base Substitution G-C INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN753-S.SNP.4:18157418 chr04:018157418 0 W/18157418-18157418 FN753-S Single Base Substitution C-T INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN-348.SNP.4:18159110 chr04:018159110 0 W/18159110-18159110 FN-348 Single Base Substitution T-A INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN3415-S.SNP.4:18160145 chr04:018160145 0 W/18160145-18160145 FN3415-S SNP C -> A AC=2;AN=184;BQB=0.652667;DP=3111;DP4=1411,1565,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.10609e-12;MQSB=0.892813;RPB=0.416568;SGB=81.5311;VDB=0.149235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.4:18160707 chr04:018160707 0 W/18160707-18160707 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.995027;DP=2820;DP4=1198,1491,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.20756e-12;MQSB=0.927025;RPB=0.848381;SGB=85.5263;VDB=0.464671;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.4:18162125 chr04:018162125 0 W/18162125-18162125 FN4104-S SNP G -> T AC=1;AN=182;BQB=0.32186;DP=2713;DP4=1333,1306,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000129645;MQSB=0.993696;RPB=0.882047;SGB=10.5899;VDB=0.995291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.4:18167739 chr04:018167739 0 W/18167739-18167739 FN-301 Single Base Substitution G-A INTERGENIC HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-363.SNP.4:18179098 chr04:018179098 0 W/18179098-18179098 FN-363 Single Base Substitution A-G INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-392.SNP.4:18186534 chr04:018186534 0 W/18186534-18186534 FN-392 Single Base Substitution T-C INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. W247-2-1.SNP.4:18189650 chr04:018189650 0 W/18189650-18189650 W247-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3360-S.SNP.4:18190148 chr04:018190148 0 W/18190148-18190148 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.97819;DP=3034;DP4=1359,1461,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.40122e-08;MQSB=0.913666;RPB=0.995373;SGB=42.7914;VDB=0.545637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.4:18192489 chr04:018192489 0 W/18192489-18192489 FN2689-S SNP T -> C AC=1;AN=200;BQB=0.466193;DP=4468;DP4=2213,2081,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60139e-08;MQSB=0.995299;RPB=0.802844;SGB=49.6594;VDB=0.0827961;EFF=INTRON(MODIFIER||||317|LOC_Os04g30450|protein_coding|CODING|LOC_Os04g30450.1|6|1) FN1346-S.SNP.4:18195538 chr04:018195538 0 W/18195538-18195538 FN1346-S Single Base Substitution T-C INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3758-S.SNP.4:18205487 chr04:018205487 0 W/18205487-18205487 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.980119;DP=2731;DP4=1307,1358,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.28335e-06;MQSB=0.996013;RPB=0.878089;SGB=44.5415;VDB=0.724486;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.4:18210688 chr04:018210688 0 W/18210688-18210688 FN-220 Single Base Substitution C-T INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN1699-S.SNP.4:18222631 chr04:018222631 0 W/18222631-18222631 FN1699-S SNP A -> C AC=2;AN=188;BQB=0.427469;DP=3652;DP4=1822,1757,19,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.86111e-19;MQSB=0.938619;RPB=0.542402;SGB=82.0286;VDB=0.176132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.4:18237060 chr04:018237060 0 W/18237060-18237060 FN3431-S SNP C -> A AC=2;AN=184;BQB=0.91131;DP=3176;DP4=1931,1132,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11281e-12;MQSB=0.97324;RPB=0.976965;SGB=45.9712;VDB=0.769523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.4:18237422 chr04:018237422 0 W/18237422-18237422 FN1582-S Single Base Substitution C-T INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1582-S.SNP.4:18237428 chr04:018237428 0 W/18237428-18237428 FN1582-S Single Base Substitution T-C INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3964-S.SNP.4:18237806 chr04:018237806 0 W/18237806-18237806 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.799753;DP=2470;DP4=1072,1310,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000199162;MQSB=0.988749;RPB=0.833354;SGB=38.8805;VDB=0.0495969;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M69I|142|LOC_Os04g30520|protein_coding|CODING|LOC_Os04g30520.1|1|1) FN936-S.SNP.4:18238859 chr04:018238859 0 W/18238859-18238859 FN936-S Single Base Substitution A-G INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3356-S.SNP.4:18240707 chr04:018240707 0 W/18240707-18240707 FN3356-S SNP T -> C AC=1;AN=184;BQB=0.963908;DP=2968;DP4=1461,1372,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.90312e-07;MQSB=0.934879;RPB=0.830802;SGB=44.2207;VDB=0.61315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.4:18241553 chr04:018241553 0 W/18241553-18241553 FN3423-S SNP T -> C AC=1;AN=184;BQB=0.988345;DP=2398;DP4=1210,1153,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30479e-05;MQSB=0.787386;RPB=0.0789472;SGB=18.1394;VDB=0.424295;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.4:18241988 chr04:018241988 0 W/18241988-18241988 FN4202-S SNP A -> T AC=2;AN=170;BQB=0.923511;DP=2359;DP4=1196,976,21,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.75303e-21;MQSB=0.926371;RPB=0.891986;SGB=150.383;VDB=0.675828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3788-S.SNP.4:18246334 chr04:018246334 0 W/18246334-18246334 FN3788-S SNP G -> C AC=1;AN=190;BQB=0.946922;DP=2760;DP4=1225,1370,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82569e-08;MQSB=0.927869;RPB=0.986059;SGB=53.8699;VDB=0.954597;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.4:18254351 chr04:018254351 0 W/18254351-18254351 FN921-S Single Base Substitution A-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN2117-S.SNP.4:18271736 chr04:018271736 0 W/18271736-18271736 FN2117-S SNP T -> C AC=2;AN=168;BQB=0.999816;DP=4415;DP4=2130,2209,31,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.88521e-26;MQSB=0.961;RPB=0.975491;SGB=-372.689;VDB=0.553816;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.4:18271851 chr04:018271851 0 W/18271851-18271851 FN1023-S Single Base Substitution G-C INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1492-S.SNP.4:18273047 chr04:018273047 0 W/18273047-18273047 FN1492-S Single Base Substitution T-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2202-S.SNP.4:18280807 chr04:018280807 0 W/18280807-18280807 FN2202-S SNP A -> G AC=1;AN=190;BQB=0.164169;DP=5072;DP4=2305,2455,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197161;MQB=1.01353e-06;MQSB=0.963427;RPB=0.798568;SGB=32.5467;VDB=0.927383;EFF=INTRON(MODIFIER||||505|LOC_Os04g30610|protein_coding|CODING|LOC_Os04g30610.1|1|1) FN3561-S.SNP.4:18282028 chr04:018282028 0 W/18282028-18282028 FN3561-S SNP T -> C AC=2;AN=188;BQB=0.966523;DP=3184;DP4=1603,1458,30,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68824e-34;MQSB=0.982778;RPB=0.822223;SGB=218.908;VDB=0.862404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2158-S.SNP.4:18282774 chr04:018282774 0 W/18282774-18282774 FN2158-S SNP C -> A AC=2;AN=168;BQB=0.487144;DP=3671;DP4=1799,1800,24,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.51645e-21;MQSB=0.921156;RPB=0.972209;SGB=-219.286;VDB=0.728679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.4:18283833 chr04:018283833 0 W/18283833-18283833 FN2749-S SNP A -> C AC=2;AN=200;BQB=0.999829;DP=3643;DP4=1569,1767,11,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.13246e-13;MQSB=0.0087959;RPB=0.954842;SGB=79.9264;VDB=0.739088;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.4:18293384 chr04:018293384 0 W/18293384-18293384 FN4112-S SNP C -> T AC=2;AN=182;BQB=0.982229;DP=3428;DP4=1693,1643,17,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.29259e-17;MQSB=0.830074;RPB=0.782389;SGB=125.307;VDB=0.809279;EFF=INTRON(MODIFIER||||723|LOC_Os04g30630|protein_coding|CODING|LOC_Os04g30630.1|7|1) FN2531-S.SNP.4:18295007 chr04:018295007 0 W/18295007-18295007 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.949479;DP=3942;DP4=1988,1781,16,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.2038e-15;MQSB=0.989987;RPB=0.917302;SGB=104.69;VDB=0.610267;EFF=INTRON(MODIFIER||||723|LOC_Os04g30630|protein_coding|CODING|LOC_Os04g30630.1|2|1) FN1458-S.SNP.4:18295699 chr04:018295699 0 W/18295699-18295699 FN1458-S Single Base Substitution T-G INTRON HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2114-S.SNP.4:18296275 chr04:018296275 0 W/18296275-18296275 FN2114-S SNP G -> T AC=2;AN=168;BQB=0.334714;DP=4025;DP4=1974,1955,17,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.07399e-21;MQSB=0.981125;RPB=0.950326;SGB=-215.717;VDB=0.253061;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N18K|723|LOC_Os04g30630|protein_coding|CODING|LOC_Os04g30630.1|2|1) FN3787-S.SNP.4:18296912 chr04:018296912 0 W/18296912-18296912 FN3787-S SNP A -> T AC=1;AN=190;BQB=0.999813;DP=2624;DP4=1255,1277,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08026e-08;MQSB=0.900113;RPB=0.790962;SGB=58.2031;VDB=0.225991;EFF=INTRON(MODIFIER||||723|LOC_Os04g30630|protein_coding|CODING|LOC_Os04g30630.1|1|1) FN3445-S.SNP.4:18303205 chr04:018303205 0 W/18303205-18303205 FN3445-S SNP C -> T AC=2;AN=184;BQB=0.140537;DP=2825;DP4=1335,1415,9,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00743363;MQB=1.2826e-06;MQSB=0.00864646;RPB=0.909641;SGB=60.4004;VDB=0.685185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-295.SNP.4:18303215 chr04:018303215 0 W/18303215-18303215 FN-295 Single Base Substitution T-A INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN323-S.SNP.4:18305340 chr04:018305340 0 W/18305340-18305340 FN323-S Single Base Substitution C-T INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-236.SNP.4:18307785 chr04:018307785 0 W/18307785-18307785 FN-236 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3665-S.SNP.4:18308708 chr04:018308708 0 W/18308708-18308708 FN3665-S SNP G -> C AC=1;AN=190;BQB=0.499174;DP=2587;DP4=1390,1115,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00231929;MQB=0.00376554;MQSB=0.576841;RPB=0.728253;SGB=43.2083;VDB=0.076948;EFF=INTRON(MODIFIER||||802|LOC_Os04g30650|protein_coding|CODING|LOC_Os04g30650.1|3|1) FN2671-S.SNP.4:18311105 chr04:018311105 0 W/18311105-18311105 FN2671-S SNP G -> A AC=1;AN=200;BQB=0.516378;DP=4576;DP4=2224,2138,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218531;MQB=1.76181e-06;MQSB=0.870687;RPB=0.659016;SGB=33.0593;VDB=0.632396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.4:18311152 chr04:018311152 0 W/18311152-18311152 FN3823-S SNP C -> T AC=1;AN=190;BQB=0.937028;DP=2381;DP4=1114,1204,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.94249e-06;MQSB=0.872906;RPB=0.401233;SGB=39.9877;VDB=0.105532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.4:18313549 chr04:018313549 0 W/18313549-18313549 FN1452-S Single Base Substitution C-G INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2426.SNP.4:18314082 chr04:018314082 0 W/18314082-18314082 FN2426 SNP A -> C AC=1;AN=200;BQB=0.459995;DP=4722;DP4=2276,2239,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.83979e-12;MQSB=0.648131;RPB=0.442151;SGB=72.7161;VDB=0.709518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:18316970 chr04:018316970 0 W/18316970-18316970 FN2618-S SNP G -> C AC=1;AN=198;BQB=0.986816;DP=3880;DP4=1850,1768,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.72459e-09;MQSB=0.589111;RPB=0.884293;SGB=40.149;VDB=0.366444;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.4:18317969 chr04:018317969 0 W/18317969-18317969 FN-362 Single Base Substitution C-T INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN721-S.SNP.4:18321780 chr04:018321780 0 W/18321780-18321780 FN721-S Single Base Substitution C-T STOP_GAINED HET LOC_Os04g30660 NBS type disease resistance protein, putative, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3440-S.SNP.4:18329693 chr04:018329693 0 W/18329693-18329693 FN3440-S SNP T -> G AC=2;AN=184;BQB=0.941293;DP=2476;DP4=1211,1189,15,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.09562e-22;MQSB=0.887006;RPB=0.84467;SGB=120.271;VDB=0.11535;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.4:18329895 chr04:018329895 0 W/18329895-18329895 FN-294 Single Base Substitution A-T INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN1460-S.SNP.4:18330744 chr04:018330744 0 W/18330744-18330744 FN1460-S Single Base Substitution T-A INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3452-S.SNP.4:18331966 chr04:018331966 0 W/18331966-18331966 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.270051;DP=3008;DP4=1625,1269,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00147987;MQSB=0.00171419;RPB=0.534245;SGB=3.75875;VDB=0.333627;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.4:18340398 chr04:018340398 0 W/18340398-18340398 W23-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2497.SNP.4:18340673 chr04:018340673 0 W/18340673-18340673 FN2497 SNP C -> T AC=1;AN=200;BQB=0.986557;DP=4804;DP4=2047,2443,8,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00114586;MQSB=0.128979;RPB=0.669765;SGB=29.4849;VDB=0.998025;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.4:18341758 chr04:018341758 0 W/18341758-18341758 FN-283 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g30690 NBS type disease resistance protein, putative, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN442-S.SNP.4:18343261 chr04:018343261 0 W/18343261-18343261 FN442-S Single Base Substitution G-T INTRON HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1379-S.SNP.4:18361909 chr04:018361909 0 W/18361909-18361909 FN1379-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN576-S.SNP.4:18382055 chr04:018382055 0 W/18382055-18382055 FN576-S Single Base Substitution C-T INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3950-S.SNP.4:18390749 chr04:018390749 0 W/18390749-18390749 FN3950-S SNP G -> A AC=1;AN=168;BQB=0.930289;DP=2508;DP4=1356,1067,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.60912e-07;MQSB=0.965303;RPB=0.645616;SGB=52.1728;VDB=0.231693;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.4:18391879 chr04:018391879 0 W/18391879-18391879 FN852-S Single Base Substitution T-C INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN921-S.SNP.4:18395006 chr04:018395006 0 W/18395006-18395006 FN921-S Single Base Substitution A-G INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-104.SNP.4:18395644 chr04:018395644 0 W/18395644-18395644 FN-104 Single Base Substitution C-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-78.SNP.4:18395644 chr04:018395644 0 W/18395644-18395644 FN-78 Single Base Substitution C-T INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2231-S.SNP.4:18395644 chr04:018395644 0 W/18395644-18395644 FN2231-S SNP C -> T AC=2;AN=190;BQB=0.416042;DP=4807;DP4=2161,2247,20,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00020803;MQB=9.32313e-22;MQSB=0.2985;RPB=0.858222;SGB=90.0605;VDB=0.0653617;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.4:18395644 chr04:018395644 0 W/18395644-18395644 FN872-S Single Base Substitution C-T INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN933-S.SNP.4:18395644 chr04:018395644 0 W/18395644-18395644 FN933-S Single Base Substitution C-T INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2765-S.SNP.4:18404959 chr04:018404959 0 W/18404959-18404959 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.999969;DP=4205;DP4=1875,2081,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32831e-12;MQSB=0.985556;RPB=0.806942;SGB=12.5396;VDB=0.487589;EFF=INTRON(MODIFIER||||347|LOC_Os04g30780|protein_coding|CODING|LOC_Os04g30780.1|2|1),INTRON(MODIFIER||||222|LOC_Os04g30780|protein_coding|CODING|LOC_Os04g30780.2|2|1) FN1023-S.SNP.4:18408702 chr04:018408702 0 W/18408702-18408702 FN1023-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g30790 expressed protein SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN4187-S.SNP.4:18421490 chr04:018421490 0 W/18421490-18421490 FN4187-S SNP C -> A AC=1;AN=170;BQB=0.968898;DP=2005;DP4=1182,756,12,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.27467e-08;MQSB=0.845149;RPB=0.577301;SGB=45.206;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.4:18422998 chr04:018422998 0 W/18422998-18422998 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.920667;DP=3989;DP4=1868,1753,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000752068;MQB=4.52997e-07;MQSB=0.000324514;RPB=0.445904;SGB=46.7622;VDB=0.159485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.4:18426121 chr04:018426121 0 W/18426121-18426121 FN2479 SNP C -> T AC=1;AN=200;BQB=0.554734;DP=4659;DP4=2092,2338,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.7428e-07;MQSB=0.122943;RPB=0.418687;SGB=54.2646;VDB=0.686723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.4:18429307 chr04:018429307 0 W/18429307-18429307 FN3296-S SNP T -> G AC=1;AN=184;BQB=0.944007;DP=2840;DP4=1461,1235,3,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000260546;MQSB=0.984013;RPB=0.997333;SGB=21.6146;VDB=0.551573;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.4:18433594 chr04:018433594 0 W/18433594-18433594 FN907-S Single Base Substitution T-C INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3696-S.SNP.4:18436203 chr04:018436203 0 W/18436203-18436203 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.745019;DP=2697;DP4=1168,1379,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00148313;MQB=7.91071e-06;MQSB=0.816418;RPB=0.313077;SGB=39.6545;VDB=0.224506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.4:18438578 chr04:018438578 0 W/18438578-18438578 FN3771-S SNP G -> A AC=1;AN=190;BQB=0.99975;DP=2135;DP4=1019,1063,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00030224;MQSB=0.977711;RPB=0.94073;SGB=21.7749;VDB=0.0630446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V175I|975|LOC_Os04g30860|protein_coding|CODING|LOC_Os04g30860.1|4|1) FN2313.SNP.4:18441882 chr04:018441882 0 W/18441882-18441882 FN2313 SNP A -> C AC=1;AN=192;BQB=0.311554;DP=4975;DP4=2335,2284,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.67953e-08;MQSB=0.779807;RPB=0.973961;SGB=-60.1939;VDB=0.322122;EFF=INTRON(MODIFIER||||975|LOC_Os04g30860|protein_coding|CODING|LOC_Os04g30860.1|13|1) FN996-S.SNP.4:18445628 chr04:018445628 0 W/18445628-18445628 FN996-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g30870 transposon protein, putative, unclassified, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN2291.SNP.4:18449495 chr04:018449495 0 W/18449495-18449495 FN2291 SNP T -> G AC=1;AN=192;BQB=0.113374;DP=5258;DP4=2476,2569,20,21;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00361354;MQB=3.4424e-06;MQSB=0.035463;RPB=0.739705;SGB=136.017;VDB=0.000308211;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atC|I218|1161|LOC_Os04g30870|protein_coding|CODING|LOC_Os04g30870.1|7|1) FN2350.SNP.4:18449659 chr04:018449659 0 W/18449659-18449659 FN2350 SNP G -> A AC=1;AN=192;BQB=0.807347;DP=5208;DP4=2461,2469,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0103687;MQB=0.5798;MQSB=1.9392e-05;RPB=0.999838;SGB=51.9931;VDB=0.51546;EFF=INTRON(MODIFIER||||1161|LOC_Os04g30870|protein_coding|CODING|LOC_Os04g30870.1|6|1) FN2572-S.SNP.4:18451218 chr04:018451218 0 W/18451218-18451218 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.712698;DP=3809;DP4=1761,1884,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.84097e-10;MQSB=0.998832;RPB=0.806834;SGB=72.5245;VDB=0.808874;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q110*|1161|LOC_Os04g30870|protein_coding|CODING|LOC_Os04g30870.1|3|1);LOF=(LOC_Os04g30870|LOC_Os04g30870|1|1.00);NMD=(LOC_Os04g30870|LOC_Os04g30870|1|1.00) FN980-S.SNP.4:18452077 chr04:018452077 0 W/18452077-18452077 FN980-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2207-S.SNP.4:18456166 chr04:018456166 0 W/18456166-18456166 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.513506;DP=5065;DP4=2613,2145,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.07711e-05;MQSB=0.999629;RPB=0.021394;SGB=-35.4322;VDB=0.26298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A211V|274|LOC_Os04g30880|protein_coding|CODING|LOC_Os04g30880.1|8|1) FN4075-S.SNP.4:18463353 chr04:018463353 0 W/18463353-18463353 FN4075-S SNP C -> T AC=1;AN=182;BQB=0.986313;DP=3415;DP4=1748,1582,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=35;MQ0F=0.0726208;MQB=0.977879;MQSB=3.22709e-09;RPB=0.61602;SGB=20.6332;VDB=0.62439;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D891|936|LOC_Os04g30900|protein_coding|CODING|LOC_Os04g30900.1|7|1) FN2386.SNP.4:18471633 chr04:018471633 0 W/18471633-18471633 FN2386 SNP C -> T AC=1;AN=192;BQB=0.147986;DP=4847;DP4=2237,2311,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0794e-06;MQSB=0.899083;RPB=0.69491;SGB=5.79046;VDB=0.961358;EFF=INTRON(MODIFIER||||221|LOC_Os04g30910|protein_coding|CODING|LOC_Os04g30910.1|3|1),INTRON(MODIFIER||||215|LOC_Os04g30910|protein_coding|CODING|LOC_Os04g30910.2|3|1),INTRON(MODIFIER||||117|LOC_Os04g30910|protein_coding|CODING|LOC_Os04g30910.3|2|1) FN2480.SNP.4:18474996 chr04:018474996 0 W/18474996-18474996 FN2480 SNP C -> T AC=1;AN=200;BQB=0.272109;DP=4060;DP4=1942,1859,8,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000246305;MQB=0.0004421;MQSB=4.39694e-08;RPB=0.818623;SGB=72.6852;VDB=0.932636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.4:18476934 chr04:018476934 0 W/18476934-18476934 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.976399;DP=3487;DP4=1434,1886,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59969e-09;MQSB=0.993968;RPB=0.73729;SGB=71.8647;VDB=0.114141;EFF=UTR_5_PRIME(MODIFIER||34||166|LOC_Os04g30920|protein_coding|CODING|LOC_Os04g30920.1|1|1) FN-219.SNP.4:18478875 chr04:018478875 0 W/18478875-18478875 FN-219 Single Base Substitution T-C INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN477-S.SNP.4:18479586 chr04:018479586 0 W/18479586-18479586 FN477-S Single Base Substitution T-C INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2588-S.SNP.4:18481448 chr04:018481448 0 W/18481448-18481448 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.796668;DP=4218;DP4=1873,1944,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.76008e-08;MQSB=0.893447;RPB=0.835138;SGB=-35.4258;VDB=0.923282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.4:18487807 chr04:018487807 0 W/18487807-18487807 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.989043;DP=3054;DP4=1449,1507,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35076e-11;MQSB=0.858612;RPB=0.996891;SGB=80.9724;VDB=0.971132;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.4:18488780 chr04:018488780 0 W/18488780-18488780 FN-163 Single Base Substitution C-A INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN3711-S.SNP.4:18488780 chr04:018488780 0 W/18488780-18488780 FN3711-S SNP C -> A AC=1;AN=190;BQB=0.0473887;DP=2133;DP4=723,837,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00111962;MQSB=0.585795;RPB=0.0584355;SGB=-81.4217;VDB=0.61269;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.4:18491790 chr04:018491790 0 W/18491790-18491790 FN805-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g30930 NB-ARC domain containing protein, expressed SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2191-S.SNP.4:18497568 chr04:018497568 0 W/18497568-18497568 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.447586;DP=4773;DP4=2301,1922,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=3.05357e-05;MQSB=0.000243621;RPB=0.981429;SGB=-12.1142;VDB=0.545558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.4:18498928 chr04:018498928 0 W/18498928-18498928 FN1353-S Single Base Substitution T-C INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN591-S.SNP.4:18506182 chr04:018506182 0 W/18506182-18506182 FN591-S Single Base Substitution G-A INTRON HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN833-S.SNP.4:18507407 chr04:018507407 0 W/18507407-18507407 FN833-S Single Base Substitution T-C INTRON HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN2178-S.SNP.4:18509014 chr04:018509014 0 W/18509014-18509014 FN2178-S SNP A -> G AC=1;AN=168;BQB=0.00156806;DP=3188;DP4=1053,2089,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.379974;MQSB=0.0791165;RPB=0.308708;SGB=-166.629;VDB=0.671981;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.4:18517858 chr04:018517858 0 W/18517858-18517858 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.996591;DP=2934;DP4=2223,554,19,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0074983;MQB=0.00029033;MQSB=4.37176e-30;RPB=0.956972;SGB=76.3213;VDB=0.825781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.4:18523035 chr04:018523035 0 W/18523035-18523035 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.655786;DP=3490;DP4=1647,1662,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.74238e-08;MQSB=0.985996;RPB=0.449536;SGB=77.1196;VDB=0.795822;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R297*|750|LOC_Os04g31000|protein_coding|CODING|LOC_Os04g31000.1|5|1);LOF=(LOC_Os04g31000|LOC_Os04g31000|1|1.00);NMD=(LOC_Os04g31000|LOC_Os04g31000|1|1.00) FN-128.SNP.4:18525528 chr04:018525528 0 W/18525528-18525528 FN-128 Single Base Substitution A-T INTRON HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN-128.SNP.4:18525529 chr04:018525529 0 W/18525529-18525529 FN-128 Single Base Substitution A-T INTRON HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN554-S.SNP.4:18525660 chr04:018525660 0 W/18525660-18525660 FN554-S Single Base Substitution A-G INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN426-S.SNP.4:18528421 chr04:018528421 0 W/18528421-18528421 FN426-S Single Base Substitution A-C INTRON HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3471-S.SNP.4:18536814 chr04:018536814 0 W/18536814-18536814 FN3471-S SNP C -> T AC=2;AN=184;BQB=0.822038;DP=2941;DP4=1729,1028,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.35791e-10;MQSB=0.999641;RPB=0.390519;SGB=103.004;VDB=0.314313;EFF=INTRON(MODIFIER||||163|LOC_Os04g31010|protein_coding|CODING|LOC_Os04g31010.1|3|1),INTRON(MODIFIER||||163|LOC_Os04g31010|protein_coding|CODING|LOC_Os04g31010.2|3|1) FN2197-S.SNP.4:18538213 chr04:018538213 0 W/18538213-18538213 FN2197-S SNP A -> C AC=2;AN=190;BQB=0.893413;DP=5026;DP4=2175,2551,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.63795e-14;MQSB=0.999212;RPB=0.99902;SGB=94.6341;VDB=0.212995;EFF=INTRON(MODIFIER||||163|LOC_Os04g31010|protein_coding|CODING|LOC_Os04g31010.1|1|1),INTRON(MODIFIER||||163|LOC_Os04g31010|protein_coding|CODING|LOC_Os04g31010.2|1|1) FN2489.SNP.4:18556520 chr04:018556520 0 W/18556520-18556520 FN2489 SNP C -> A AC=1;AN=200;BQB=0.204846;DP=4854;DP4=2182,2403,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.63773e-16;MQSB=0.953403;RPB=0.931164;SGB=-8.87404;VDB=0.728751;EFF=INTRON(MODIFIER||||408|LOC_Os04g31050|protein_coding|CODING|LOC_Os04g31050.1|7|1) FN-327.SNP.4:18560322 chr04:018560322 0 W/18560322-18560322 FN-327 Single Base Substitution C-T UTR_3_PRIME HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN2559-S.SNP.4:18568837 chr04:018568837 0 W/18568837-18568837 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.946951;DP=4325;DP4=2298,1829,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.52882e-06;MQSB=0.924234;RPB=0.660944;SGB=35.7638;VDB=0.763665;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.4:18569555 chr04:018569555 0 W/18569555-18569555 FN4203-S SNP C -> A AC=1;AN=170;BQB=0.926462;DP=1723;DP4=1115,557,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.23162e-11;MQSB=0.0846473;RPB=0.461687;SGB=27.2119;VDB=0.0371611;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.4:18569556 chr04:018569556 0 W/18569556-18569556 FN4203-S SNP A -> T AC=1;AN=170;BQB=0.88843;DP=1733;DP4=1115,543,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.70685e-10;MQSB=0.0592792;RPB=0.834898;SGB=65.6427;VDB=0.00848727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.4:18572228 chr04:018572228 0 W/18572228-18572228 FN3910-S SNP G -> T AC=2;AN=158;BQB=0.917489;DP=1856;DP4=1207,550,8,3;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=5.21049e-05;MQSB=1.44004e-05;RPB=0.393609;SGB=27.3346;VDB=0.120659;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.4:18584497 chr04:018584497 0 W/18584497-18584497 FN2428 SNP G -> A AC=1;AN=200;BQB=0.990466;DP=4407;DP4=2237,1912,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.58033e-15;MQSB=0.972881;RPB=0.880222;SGB=79.9264;VDB=0.528897;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.4:18589590 chr04:018589590 0 W/18589590-18589590 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN457-S.SNP.4:18590647 chr04:018590647 0 W/18590647-18590647 FN457-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g31090 expressed protein SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN812-S.SNP.4:18592804 chr04:018592804 0 W/18592804-18592804 FN812-S Single Base Substitution T-G INTRON HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1484-S.SNP.4:18596196 chr04:018596196 0 W/18596196-18596196 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2577-S.SNP.4:18603753 chr04:018603753 0 W/18603753-18603753 FN2577-S SNP A -> T AC=1;AN=198;BQB=0.923027;DP=4367;DP4=2171,1957,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00022899;MQB=8.24921e-10;MQSB=0.872221;RPB=0.0832684;SGB=58.1246;VDB=0.27643;EFF=INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.1|3|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.2|4|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.3|5|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.4|4|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.5|4|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.6|3|1) FN185-2_3_4.SNP.4:18605363 chr04:018605363 0 W/18605363-18605363 FN185-2_3_4 SNP C -> T AC=1;AN=188;BQB=0.279867;DP=3814;DP4=1950,1831,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26558e-09;MQSB=0.974016;RPB=0.743172;SGB=-11.74;VDB=0.401104;EFF=UTR_5_PRIME(MODIFIER||993||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.5|4|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.2|3|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.1|2|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.3|4|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.6|2|1),INTRON(MODIFIER||||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.4|3|1) FN2187-S.SNP.4:18609092 chr04:018609092 0 W/18609092-18609092 FN2187-S SNP A -> C AC=1;AN=190;BQB=0.817625;DP=4750;DP4=2267,2200,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15514e-10;MQSB=0.649063;RPB=0.384793;SGB=16.5421;VDB=0.477564;EFF=UTR_5_PRIME(MODIFIER||4722||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.2|1|1),UTR_5_PRIME(MODIFIER||4722||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.3|3|1),UTR_5_PRIME(MODIFIER||4722||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.4|3|1),UTR_5_PRIME(MODIFIER||4722||375|LOC_Os04g31120|protein_coding|CODING|LOC_Os04g31120.5|3|1) FN1466-S.SNP.4:18614177 chr04:018614177 0 W/18614177-18614177 FN1466-S Single Base Substitution G-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2547-S.SNP.4:18625107 chr04:018625107 0 W/18625107-18625107 FN2547-S SNP C -> G AC=1;AN=198;BQB=0.938998;DP=4103;DP4=2067,1843,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.65855e-07;MQSB=0.591456;RPB=0.647;SGB=36.5539;VDB=0.782113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.4:18627872 chr04:018627872 0 W/18627872-18627872 FN3678-S SNP G -> T AC=1;AN=190;BQB=0.999728;DP=3124;DP4=1586,1405,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89712e-09;MQSB=0.956463;RPB=0.56609;SGB=58.2031;VDB=0.795841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.4:18630265 chr04:018630265 0 W/18630265-18630265 FN3615-S SNP T -> A AC=1;AN=190;BQB=0.997556;DP=2758;DP4=1336,1286,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.09758e-08;MQSB=0.961344;RPB=0.950186;SGB=26.2136;VDB=0.0668852;EFF=INTRON(MODIFIER||||116|LOC_Os04g31160|protein_coding|CODING|LOC_Os04g31160.1|2|1) FN3805-S.SNP.4:18640406 chr04:018640406 0 W/18640406-18640406 FN3805-S SNP C -> G AC=2;AN=190;BQB=0.999896;DP=2654;DP4=1272,1211,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.15584e-15;MQSB=0.985993;RPB=0.600373;SGB=82.301;VDB=0.852439;EFF=INTRON(MODIFIER||||200|LOC_Os04g31170|protein_coding|CODING|LOC_Os04g31170.1|1|1),INTRON(MODIFIER||||199|LOC_Os04g31170|protein_coding|CODING|LOC_Os04g31170.2|1|1) FN3627-S.SNP.4:18644759 chr04:018644759 0 W/18644759-18644759 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.994972;DP=2749;DP4=1214,1437,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30741e-08;MQSB=0.967356;RPB=0.981341;SGB=62.7569;VDB=0.147748;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.4:18647820 chr04:018647820 0 W/18647820-18647820 FN-175 Single Base Substitution G-T INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1720-S.SNP.4:18652903 chr04:018652903 0 W/18652903-18652903 FN1720-S SNP C -> T AC=1;AN=188;BQB=0.172012;DP=3935;DP4=1860,2034,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.537e-08;MQSB=0.906587;RPB=0.961447;SGB=33.7061;VDB=0.756872;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.4:18655753 chr04:018655753 0 W/18655753-18655753 FN-387 Single Base Substitution G-A UTR_5_PRIME HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN389-S.SNP.4:18655962 chr04:018655962 0 W/18655962-18655962 FN389-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2147-S.SNP.4:18666430 chr04:018666430 0 W/18666430-18666430 FN2147-S SNP G -> T AC=1;AN=168;BQB=0.724001;DP=4502;DP4=2079,2389,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.69714e-10;MQSB=0.976905;RPB=0.956555;SGB=11.3448;VDB=0.486094;EFF=INTRON(MODIFIER||||797|LOC_Os04g31190|protein_coding|CODING|LOC_Os04g31190.1|6|1) FN-221.SNP.4:18680319 chr04:018680319 0 W/18680319-18680319 FN-221 Single Base Substitution T-G INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3366-S.SNP.4:18702178 chr04:018702178 0 W/18702178-18702178 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.942742;DP=3001;DP4=1351,1561,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000103584;MQSB=0.231729;RPB=0.996266;SGB=35.1773;VDB=0.938151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.4:18707798 chr04:018707798 0 W/18707798-18707798 FN3730-S SNP T -> C AC=1;AN=190;BQB=0.91541;DP=2897;DP4=1342,1433,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.91249e-15;MQSB=0.998507;RPB=0.635201;SGB=59.414;VDB=0.520713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.4:18723915 chr04:018723915 0 W/18723915-18723915 FN1533-S Single Base Substitution A-G INTERGENIC Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN-142.SNP.4:18724775 chr04:018724775 0 W/18724775-18724775 FN-142 Single Base Substitution C-T INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3324-S.SNP.4:18727225 chr04:018727225 0 W/18727225-18727225 FN3324-S SNP C -> T AC=2;AN=184;BQB=0.986581;DP=3663;DP4=1773,1765,11,11;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.000546001;MQB=9.23379e-08;MQSB=0.435032;RPB=0.96315;SGB=93.9603;VDB=0.812071;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.4:18730571 chr04:018730571 0 W/18730571-18730571 FN916-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g31300 transposon protein, putative, unclassified, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3469-S.SNP.4:18730688 chr04:018730688 0 W/18730688-18730688 FN3469-S SNP C -> T AC=1;AN=184;BQB=0.986831;DP=2963;DP4=1363,1509,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46221e-11;MQSB=0.661096;RPB=0.693346;SGB=63.9222;VDB=0.45487;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q161*|227|LOC_Os04g31300|protein_coding|CODING|LOC_Os04g31300.1|2|1) FN3893-S.SNP.4:18732239 chr04:018732239 0 W/18732239-18732239 FN3893-S SNP A -> G AC=1;AN=158;BQB=0.983093;DP=2468;DP4=1314,998,11,10;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0125608;MQB=3.06392e-05;MQSB=7.75034e-09;RPB=0.930027;SGB=61.029;VDB=0.675311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1406-S.SNP.4:18740075 chr04:018740075 0 W/18740075-18740075 FN1406-S Single Base Substitution T-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2537-S.SNP.4:18743989 chr04:018743989 0 W/18743989-18743989 FN2537-S SNP T -> A AC=2;AN=198;BQB=0.69892;DP=4053;DP4=2152,1728,24,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.74201e-23;MQSB=0.849658;RPB=0.219005;SGB=94.2223;VDB=0.640044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.4:18745255 chr04:018745255 0 W/18745255-18745255 FN2362 SNP T -> C AC=1;AN=192;BQB=0.619256;DP=4657;DP4=2171,2203,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.15194e-12;MQSB=0.794014;RPB=0.934316;SGB=76.5965;VDB=0.542754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.4:18745257 chr04:018745257 0 W/18745257-18745257 FN2362 SNP G -> A AC=1;AN=192;BQB=0.791359;DP=4629;DP4=2143,2178,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.43007e-13;MQSB=0.848613;RPB=0.963214;SGB=36.607;VDB=0.603088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.4:18747929 chr04:018747929 0 W/18747929-18747929 FN2194-S SNP C -> G AC=1;AN=190;BQB=0.286057;DP=4920;DP4=2393,2242,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.14592e-09;MQSB=0.730482;RPB=0.664681;SGB=60.9777;VDB=0.918553;EFF=INTRON(MODIFIER||||425|LOC_Os04g31340|protein_coding|CODING|LOC_Os04g31340.1|4|1) FN1027-S.SNP.4:18753468 chr04:018753468 0 W/18753468-18753468 FN1027-S Single Base Substitution G-A INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2269-S.SNP.4:18753638 chr04:018753638 0 W/18753638-18753638 FN2269-S SNP A -> G AC=2;AN=190;BQB=0.900074;DP=4865;DP4=2268,2156,30,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00020555;MQB=7.2913e-28;MQSB=0.989736;RPB=0.920125;SGB=181.81;VDB=0.348863;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.4:18754843 chr04:018754843 0 W/18754843-18754843 FN3678-S SNP C -> A AC=1;AN=190;BQB=0.836493;DP=2801;DP4=1223,1450,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.22431e-10;MQSB=0.881432;RPB=0.895125;SGB=68.0854;VDB=0.970699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.4:18761428 chr04:018761428 0 W/18761428-18761428 FN2178-S SNP G -> T AC=1;AN=168;BQB=0.49913;DP=2435;DP4=1356,1032,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=6.2081e-05;MQSB=0.00210186;RPB=0.819931;SGB=2.75988;VDB=0.972135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T34K|112|LOC_Os04g31360|protein_coding|CODING|LOC_Os04g31360.1|2|1),SPLICE_SITE_REGION(LOW||||112|LOC_Os04g31360|protein_coding|CODING|LOC_Os04g31360.1|2|1) FN2218-S.SNP.4:18764248 chr04:018764248 0 W/18764248-18764248 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.107927;DP=5037;DP4=2434,2281,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31814e-10;MQSB=0.357683;RPB=0.908128;SGB=19.6499;VDB=0.994596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.4:18766464 chr04:018766464 0 W/18766464-18766464 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.915272;DP=2431;DP4=1124,1257,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.61739e-05;MQSB=0.565545;RPB=0.80333;SGB=35.3493;VDB=0.0175375;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.4:18784565 chr04:018784565 0 W/18784565-18784565 FN3762-S SNP G -> A AC=1;AN=190;BQB=0.849021;DP=3152;DP4=1598,1415,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52621e-12;MQSB=0.655261;RPB=0.825392;SGB=94.6341;VDB=0.0523843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.4:18790296 chr04:018790296 0 W/18790296-18790296 FN3512-S SNP T -> C AC=1;AN=188;BQB=0.788338;DP=2911;DP4=1462,1312,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00618344;MQB=1.07101e-06;MQSB=0.448172;RPB=0.99496;SGB=28.6195;VDB=0.794344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.4:18793511 chr04:018793511 0 W/18793511-18793511 FN2191-S SNP A -> G AC=1;AN=190;BQB=0.914573;DP=4712;DP4=2277,2143,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000848896;MQB=0.0142209;MQSB=1.77205e-10;RPB=0.915943;SGB=39.6545;VDB=0.689779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V475A|1286|LOC_Os04g31420|protein_coding|CODING|LOC_Os04g31420.1|3|1) FN3302-S.SNP.4:18795915 chr04:018795915 0 W/18795915-18795915 FN3302-S SNP A -> G AC=1;AN=184;BQB=0.39457;DP=2863;DP4=1380,1409,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00244499;MQB=4.31763e-06;MQSB=0.916964;RPB=0.953588;SGB=-2.32838;VDB=0.861992;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.4:18805512 chr04:018805512 0 W/18805512-18805512 FN620-S Single Base Substitution G-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN580-S.SNP.4:18812869 chr04:018812869 0 W/18812869-18812869 FN580-S Single Base Substitution T-C INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2419.SNP.4:18824325 chr04:018824325 0 W/18824325-18824325 FN2419 SNP T -> C AC=1;AN=200;BQB=0.977859;DP=4809;DP4=2687,1817,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.52872e-09;MQSB=0.187652;RPB=0.99936;SGB=43.8747;VDB=0.58975;EFF=UTR_3_PRIME(MODIFIER||159||112|LOC_Os04g31460|protein_coding|CODING|LOC_Os04g31460.1|1|1) FN2781-S.SNP.4:18840180 chr04:018840180 0 W/18840180-18840180 FN2781-S SNP A -> G AC=1;AN=198;BQB=0.999957;DP=3651;DP4=1649,1281,11,24;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.00191728;MQB=0.00393147;MQSB=4.52977e-10;RPB=0.228168;SGB=-280.254;VDB=0.434655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V675A|920|LOC_Os04g31510|protein_coding|CODING|LOC_Os04g31510.1|2|1) FN2086-S.SNP.4:18842667 chr04:018842667 0 W/18842667-18842667 FN2086-S SNP T -> A AC=2;AN=168;BQB=0.481594;DP=1728;DP4=993,689,13,4;HOB=0.0235261;ICB=0.494119;MQ=24;MQ0F=0.0457176;MQB=0.815096;MQSB=0;RPB=0.526128;SGB=-15.8033;VDB=0.135128;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.4:18843442 chr04:018843442 0 W/18843442-18843442 FN1413-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN360-S.SNP.4:18850047 chr04:018850047 0 W/18850047-18850047 FN360-S Single Base Substitution A-C INTRON HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN443-S.SNP.4:18853762 chr04:018853762 0 W/18853762-18853762 FN443-S Single Base Substitution G-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN700-S.SNP.4:18855963 chr04:018855963 0 W/18855963-18855963 FN700-S Single Base Substitution G-A INTERGENIC HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN-222.SNP.4:18865297 chr04:018865297 0 W/18865297-18865297 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3974-S.SNP.4:18865416 chr04:018865416 0 W/18865416-18865416 FN3974-S SNP G -> A AC=2;AN=168;BQB=0.0332502;DP=2347;DP4=989,1138,10,21;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000426076;MQB=8.9248e-13;MQSB=0.00074293;RPB=0.467233;SGB=-257.746;VDB=0.905416;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.4:18874465 chr04:018874465 0 W/18874465-18874465 FN-201 Single Base Substitution A-T INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2753-S.SNP.4:18883696 chr04:018883696 0 W/18883696-18883696 FN2753-S SNP C -> A AC=2;AN=200;BQB=0.794572;DP=4352;DP4=1835,2233,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.35323e-20;MQSB=0.99277;RPB=0.984967;SGB=101.557;VDB=0.0911608;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.4:18883697 chr04:018883697 0 W/18883697-18883697 FN2753-S SNP T -> C AC=2;AN=200;BQB=0.929351;DP=4343;DP4=1826,2266,15,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.81519e-19;MQSB=0.999999;RPB=0.952944;SGB=30.3571;VDB=0.267173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.4:18897936 chr04:018897936 0 W/18897936-18897936 FN3593-S SNP A -> G AC=1;AN=190;BQB=0.992651;DP=3181;DP4=1624,1427,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7155e-06;MQSB=0.986397;RPB=0.391744;SGB=28.9929;VDB=0.339431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.4:18899222 chr04:018899222 0 W/18899222-18899222 FN3569-S SNP G -> T AC=1;AN=188;BQB=0.94004;DP=2636;DP4=1475,1105,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.10681e-07;MQSB=0.796127;RPB=0.977192;SGB=39.8925;VDB=0.0457322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.4:18903393 chr04:018903393 0 W/18903393-18903393 FN1230-S Single Base Substitution G-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1120-S.SNP.4:18907767 chr04:018907767 0 W/18907767-18907767 FN1120-S Single Base Substitution A-G INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2373.SNP.4:18908713 chr04:018908713 0 W/18908713-18908713 FN2373 SNP G -> T AC=1;AN=192;BQB=0.69181;DP=4509;DP4=2138,2088,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.72751e-14;MQSB=0.663921;RPB=0.686824;SGB=107.503;VDB=0.871572;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.4:18921068 chr04:018921068 0 W/18921068-18921068 FN1326-S Single Base Substitution C-A INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN4208-S.SNP.4:18921891 chr04:018921891 0 W/18921891-18921891 FN4208-S SNP C -> T AC=2;AN=170;BQB=0.88335;DP=2471;DP4=1010,1356,18,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08952e-13;MQSB=0.707894;RPB=0.968531;SGB=23.0869;VDB=0.663938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.4:18925635 chr04:018925635 0 W/18925635-18925635 FN3947-S SNP T -> C AC=2;AN=168;BQB=0.114929;DP=2697;DP4=1369,1191,25,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.4624e-20;MQSB=0.986124;RPB=0.970259;SGB=-4.6021;VDB=0.959041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.4:18925893 chr04:018925893 0 W/18925893-18925893 FN2403 SNP G -> T AC=1;AN=200;BQB=0.855875;DP=4521;DP4=2213,1958,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00022119;MQB=2.64862e-12;MQSB=0.86122;RPB=0.997804;SGB=69.1109;VDB=0.532082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.4:18925985 chr04:018925985 0 W/18925985-18925985 FN2230-S SNP A -> T AC=1;AN=190;BQB=0.758528;DP=4777;DP4=1943,2262,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.23341e-13;MQSB=0.871585;RPB=0.910746;SGB=-11.0065;VDB=0.428285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.4:18926661 chr04:018926661 0 W/18926661-18926661 FN2429 SNP G -> A AC=1;AN=200;BQB=0.627751;DP=4712;DP4=2044,2327,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.83539e-08;MQSB=0.855383;RPB=0.791364;SGB=6.27959;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.4:18927731 chr04:018927731 0 W/18927731-18927731 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.0578663;DP=3775;DP4=1506,2197,19,29;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=2.21476e-16;MQSB=0.810981;RPB=0.552634;SGB=-312.842;VDB=0.759468;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.4:18930274 chr04:018930274 0 W/18930274-18930274 FN2273-S SNP G -> T AC=1;AN=190;BQB=0.39886;DP=5187;DP4=2517,2254,25,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03147e-17;MQSB=0.559329;RPB=0.72895;SGB=114.286;VDB=0.286621;EFF=INTERGENIC(MODIFIER||||||||||1) FN-77.SNP.4:18933059 chr04:018933059 0 W/18933059-18933059 FN-77 Single Base Substitution G-A INTERGENIC HOMO SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN-381.SNP.4:18933376 chr04:018933376 0 W/18933376-18933376 FN-381 Single Base Substitution T-G INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2657-S.SNP.4:18940525 chr04:018940525 0 W/18940525-18940525 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.832082;DP=4925;DP4=2445,2216,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.65433e-09;MQSB=0.993176;RPB=0.997887;SGB=40.2696;VDB=0.990894;EFF=INTERGENIC(MODIFIER||||||||||1) FN-313.SNP.4:18943570 chr04:018943570 0 W/18943570-18943570 FN-313 Single Base Substitution A-G INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN2316.SNP.4:18945768 chr04:018945768 0 W/18945768-18945768 FN2316 SNP T -> C AC=1;AN=192;BQB=0.42354;DP=4791;DP4=2310,2192,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.86514e-19;MQSB=0.944568;RPB=0.551911;SGB=69.9435;VDB=0.69982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.4:18946047 chr04:018946047 0 W/18946047-18946047 FN1651-S Single Base Substitution T-C INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3795-S.SNP.4:18948956 chr04:018948956 0 W/18948956-18948956 FN3795-S SNP C -> T AC=2;AN=190;BQB=0.742447;DP=2432;DP4=1150,1184,6,10;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0;MQB=9.18595e-05;MQSB=0.172602;RPB=0.814447;SGB=67.3108;VDB=0.505421;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A19|94|LOC_Os04g31630|protein_coding|CODING|LOC_Os04g31630.1|1|1) FN2403.SNP.4:18973314 chr04:018973314 0 W/18973314-18973314 FN2403 SNP A -> T AC=1;AN=200;BQB=0.781035;DP=5520;DP4=2558,2602,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07948e-11;MQSB=0.876496;RPB=0.917386;SGB=100.316;VDB=0.334646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.4:18994293 chr04:018994293 0 W/18994293-18994293 FN-307 Single Base Substitution C-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1443-S.SNP.4:19003237 chr04:019003237 0 W/19003237-19003237 FN1443-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3817-S.SNP.4:19003237 chr04:019003237 0 W/19003237-19003237 FN3817-S SNP G -> A AC=2;AN=190;BQB=0.966214;DP=2581;DP4=1240,1249,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.14552e-14;MQSB=0.928112;RPB=0.995993;SGB=103.742;VDB=0.906689;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.4:19003543 chr04:019003543 0 W/19003543-19003543 FN-293 Single Base Substitution C-T INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2481.SNP.4:19008833 chr04:019008833 0 W/19008833-19008833 FN2481 SNP G -> C AC=1;AN=200;BQB=0.553204;DP=4244;DP4=1723,2160,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.214e-13;MQSB=0.858221;RPB=0.144894;SGB=52.9314;VDB=0.514659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.4:19019661 chr04:019019661 0 W/19019661-19019661 FN3294-S SNP C -> T AC=2;AN=184;BQB=0.891875;DP=2941;DP4=1399,1378,9,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.63958e-18;MQSB=0.782951;RPB=0.0738873;SGB=31.1509;VDB=0.0376317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.4:19022365 chr04:019022365 0 W/19022365-19022365 FN2161-S SNP T -> A AC=1;AN=168;BQB=0.55266;DP=2261;DP4=1669,571,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.91784e-05;MQSB=0.962112;RPB=0.816657;SGB=-0.101747;VDB=0.65242;EFF=INTRON(MODIFIER||||103|LOC_Os04g31790|protein_coding|CODING|LOC_Os04g31790.1|1|1) FN-408.SNP.4:19045427 chr04:019045427 0 W/19045427-19045427 FN-408 Single Base Substitution T-A INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.4:19045427 chr04:019045427 0 W/19045427-19045427 FN408-S Single Base Substitution T-A INTRON HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-112.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN-112 Single Base Substitution C-T INTRON HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN-315.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN-315 Single Base Substitution C-T INTRON HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN-387 Single Base Substitution C-T INTRON HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-66.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN-66 Single Base Substitution C-T INTRON HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1089-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN1089-S Single Base Substitution C-T INTRON HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1300-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN1300-S Single Base Substitution C-T INTRON HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1369-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN1369-S Single Base Substitution C-T INTRON HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2120-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN2120-S SNP C -> T AC=2;AN=168;BQB=0.964251;DP=4191;DP4=1961,2128,27,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.37699e-28;MQSB=0.899815;RPB=0.925448;SGB=114.556;VDB=0.7588;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN2456.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN2456 SNP C -> T AC=2;AN=200;BQB=0.3565;DP=4841;DP4=2048,2428,23,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6266e-25;MQSB=0.782861;RPB=0.862892;SGB=2.01902;VDB=0.939221;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN2658-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN2658-S SNP C -> T AC=2;AN=200;BQB=0.962805;DP=5026;DP4=2224,2466,21,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000198965;MQB=2.14266e-30;MQSB=0.992869;RPB=0.914707;SGB=247.682;VDB=0.39297;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN347-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN347-S Single Base Substitution C-T INTRON HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3897-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN3897-S SNP C -> T AC=2;AN=158;BQB=0.34824;DP=2556;DP4=1055,1371,16,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.94881e-17;MQSB=0.950052;RPB=0.539602;SGB=128.418;VDB=0.582574;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN4024-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN4024-S SNP C -> T AC=2;AN=168;BQB=0.422848;DP=2739;DP4=1192,1432,10,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.60201e-09;MQSB=0.96619;RPB=0.988278;SGB=39.2004;VDB=0.185219;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN4176-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN4176-S SNP C -> T AC=2;AN=170;BQB=0.929877;DP=2559;DP4=1092,1377,6,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.61444e-10;MQSB=0.997437;RPB=0.968823;SGB=74.528;VDB=0.417773;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN768-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN768-S Single Base Substitution C-T INTRON HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN874-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN874-S Single Base Substitution C-T INTRON HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN949-S Single Base Substitution C-T INTRON HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.4:19045630 chr04:019045630 0 W/19045630-19045630 FN975-S Single Base Substitution C-T INTRON HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2797-S.SNP.4:19047332 chr04:019047332 0 W/19047332-19047332 FN2797-S SNP A -> G AC=1;AN=198;BQB=0.711602;DP=4420;DP4=1954,2229,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000226244;MQB=6.66539e-14;MQSB=0.993457;RPB=0.948135;SGB=113.881;VDB=0.0552403;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN2223-S.SNP.4:19054506 chr04:019054506 0 W/19054506-19054506 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.237956;DP=5014;DP4=2453,2193,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.16604e-12;MQSB=0.286208;RPB=0.655623;SGB=-108.329;VDB=0.955828;EFF=INTRON(MODIFIER||||249|LOC_Os04g31804|protein_coding|CODING|LOC_Os04g31804.1|1|1) FN-208.SNP.4:19061310 chr04:019061310 0 W/19061310-19061310 FN-208 Single Base Substitution C-A INTERGENIC HOMO SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN_772-3-1.SNP.4:19063576 chr04:019063576 0 W/19063576-19063576 FN_772-3-1 Single Base Substitution G-A Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN3531-S.SNP.4:19066644 chr04:019066644 0 W/19066644-19066644 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.987261;DP=2415;DP4=1193,1095,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0231884;MQB=0.75674;MQSB=0.852968;RPB=0.59833;SGB=35.9843;VDB=0.445806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.4:19071899 chr04:019071899 0 W/19071899-19071899 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.531633;DP=6019;DP4=3318,2425,11,2;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0692806;MQB=0.96105;MQSB=0.013899;RPB=0.902457;SGB=18.9639;VDB=0.899006;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1618|1778|LOC_Os04g31860|protein_coding|CODING|LOC_Os04g31860.1|5|1) FN3064-S.SNP.4:19077899 chr04:019077899 0 W/19077899-19077899 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.411901;DP=3751;DP4=1794,1860,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.172754;MQB=0.910542;MQSB=0;RPB=0.295298;SGB=53.3568;VDB=0.424774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3786-S.SNP.4:19078343 chr04:019078343 0 W/19078343-19078343 FN3786-S SNP G -> A AC=1;AN=190;BQB=0.963666;DP=2985;DP4=1292,1606,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0345059;MQB=0.483244;MQSB=0;RPB=0.818635;SGB=35.4339;VDB=0.501755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.4:19086666 chr04:019086666 0 W/19086666-19086666 FN2446 SNP G -> A AC=1;AN=200;BQB=0.981061;DP=4935;DP4=2487,2131,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.075e-11;MQSB=0.917879;RPB=0.888502;SGB=61.9006;VDB=0.47767;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.4:19086934 chr04:019086934 0 W/19086934-19086934 FN-371 Single Base Substitution T-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN2351.SNP.4:19087197 chr04:019087197 0 W/19087197-19087197 FN2351 SNP T -> C AC=1;AN=192;BQB=0.471466;DP=4747;DP4=2348,2195,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.59702e-07;MQSB=0.971047;RPB=0.999935;SGB=18.6565;VDB=0.808177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.4:19097501 chr04:019097501 0 W/19097501-19097501 FN-279 Single Base Substitution A-G INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2122-S.SNP.4:19107504 chr04:019107504 0 W/19107504-19107504 FN2122-S SNP C -> T AC=1;AN=168;BQB=0.982192;DP=4116;DP4=1984,2094,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30049e-13;MQSB=0.998373;RPB=0.340209;SGB=-82.1908;VDB=0.82406;EFF=INTRON(MODIFIER||||1003|LOC_Os04g31900|protein_coding|CODING|LOC_Os04g31900.1|3|1) FN2530-S.SNP.4:19121208 chr04:019121208 0 W/19121208-19121208 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.475247;DP=3741;DP4=1820,1725,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000267308;MQB=2.25946e-06;MQSB=0.849843;RPB=0.293495;SGB=44.9538;VDB=0.167715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.4:19135908 chr04:019135908 0 W/19135908-19135908 FN2392 SNP C -> T AC=1;AN=200;BQB=0.847718;DP=4475;DP4=2150,2106,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.23053e-06;MQSB=0.998638;RPB=0.884778;SGB=19.0642;VDB=0.450347;EFF=INTRON(MODIFIER||||97|LOC_Os04g31950|protein_coding|CODING|LOC_Os04g31950.1|1|1) FN918-S.SNP.4:19136404 chr04:019136404 0 W/19136404-19136404 FN918-S Single Base Substitution C-G INTRON HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN4183-S.SNP.4:19145035 chr04:019145035 0 W/19145035-19145035 FN4183-S SNP T -> A AC=1;AN=170;BQB=0.952876;DP=2629;DP4=1213,1324,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.10962e-06;MQSB=0.605398;RPB=0.688154;SGB=27.9928;VDB=0.791805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.4:19147790 chr04:019147790 0 W/19147790-19147790 FN3673-S SNP G -> T AC=1;AN=190;BQB=0.994876;DP=2720;DP4=1219,1379,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2439e-06;MQSB=0.494968;RPB=0.74969;SGB=49.0954;VDB=0.343518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.4:19149670 chr04:019149670 0 W/19149670-19149670 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.997372;DP=4010;DP4=1856,2096,23,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.72808e-15;MQSB=0.997191;RPB=0.975861;SGB=-8.91027;VDB=0.258659;EFF=INTRON(MODIFIER||||76|LOC_Os04g31971|protein_coding|CODING|LOC_Os04g31971.1|3|1) FN-108.SNP.4:19159347 chr04:019159347 0 W/19159347-19159347 FN-108 Single Base Substitution G-A INTRON HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-283.SNP.4:19163657 chr04:019163657 0 W/19163657-19163657 FN-283 Single Base Substitution C-A INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3495-S.SNP.4:19166494 chr04:019166494 0 W/19166494-19166494 FN3495-S SNP C -> G AC=1;AN=188;BQB=0.813078;DP=3571;DP4=1217,2261,1,12;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00364044;MQB=0.996104;MQSB=7.28675e-44;RPB=0.482211;SGB=53.5223;VDB=0.33395;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.4:19166873 chr04:019166873 0 W/19166873-19166873 FN3699-S SNP A -> G AC=1;AN=190;BQB=0.88068;DP=2291;DP4=1314,825,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0611087;MQB=0.856234;MQSB=0.113487;RPB=0.815462;SGB=35.4339;VDB=0.484207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.4:19179804 chr04:019179804 0 W/19179804-19179804 FN3310-S SNP T -> C AC=2;AN=184;BQB=0.895002;DP=3168;DP4=1698,1323,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.89254e-17;MQSB=0.999571;RPB=0.730576;SGB=121.091;VDB=0.844975;EFF=INTRON(MODIFIER||||904|LOC_Os04g32020|protein_coding|CODING|LOC_Os04g32020.1|4|1),INTRON(MODIFIER||||767|LOC_Os04g32020|protein_coding|CODING|LOC_Os04g32020.2|4|1) FN1038-S.SNP.4:19186729 chr04:019186729 0 W/19186729-19186729 FN1038-S Single Base Substitution A-G INTERGENIC HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN621-S.SNP.4:19188504 chr04:019188504 0 W/19188504-19188504 FN621-S Single Base Substitution A-G INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2309.SNP.4:19190720 chr04:019190720 0 W/19190720-19190720 FN2309 SNP A -> T AC=1;AN=192;BQB=0.820203;DP=4818;DP4=2329,2302,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.40753e-09;MQSB=0.85632;RPB=0.829968;SGB=43.3444;VDB=0.803081;EFF=INTRON(MODIFIER||||385|LOC_Os04g32030|protein_coding|CODING|LOC_Os04g32030.1|3|1) FN4022-S.SNP.4:19194447 chr04:019194447 0 W/19194447-19194447 FN4022-S SNP A -> T AC=2;AN=168;BQB=0.863148;DP=2622;DP4=1395,1114,10,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.84834e-18;MQSB=0.579746;RPB=0.0576073;SGB=154.082;VDB=0.0977769;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.4:19195221 chr04:019195221 0 W/19195221-19195221 FN-119 Single Base Substitution G-A INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2622-S.SNP.4:19197244 chr04:019197244 0 W/19197244-19197244 FN2622-S SNP T -> C AC=1;AN=200;BQB=0.99862;DP=4890;DP4=2384,2290,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.55128e-16;MQSB=0.988491;RPB=0.739752;SGB=55.5366;VDB=0.795358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1070-S.SNP.4:19199805 chr04:019199805 0 W/19199805-19199805 FN1070-S Single Base Substitution T-C INTERGENIC HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN507-S.SNP.4:19204306 chr04:019204306 0 W/19204306-19204306 FN507-S Single Base Substitution T-C INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-307.SNP.4:19204891 chr04:019204891 0 W/19204891-19204891 FN-307 Single Base Substitution G-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1030-S.SNP.4:19206830 chr04:019206830 0 W/19206830-19206830 FN1030-S Single Base Substitution A-C INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2767-S.SNP.4:19209642 chr04:019209642 0 W/19209642-19209642 FN2767-S SNP T -> A AC=1;AN=198;BQB=0.998522;DP=3622;DP4=1477,1825,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.04017e-14;MQSB=0.930461;RPB=0.971728;SGB=68.91;VDB=0.410894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.4:19212269 chr04:019212269 0 W/19212269-19212269 FN1290-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN2753-S.SNP.4:19214358 chr04:019214358 0 W/19214358-19214358 FN2753-S SNP T -> C AC=2;AN=200;BQB=0.342678;DP=4729;DP4=1887,2519,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.40418e-22;MQSB=0.829586;RPB=0.982542;SGB=51.2243;VDB=0.0414349;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.4:19217082 chr04:019217082 0 W/19217082-19217082 FN-166 Single Base Substitution A-G INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3856-S.SNP.4:19218365 chr04:019218365 0 W/19218365-19218365 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.976971;DP=2280;DP4=1126,1046,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.85477e-10;MQSB=0.459898;RPB=0.78952;SGB=64.5449;VDB=0.852836;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.4:19221031 chr04:019221031 0 W/19221031-19221031 FN3435-S SNP C -> G AC=2;AN=184;BQB=0.898728;DP=2262;DP4=1234,910,12,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47868e-10;MQSB=0.976112;RPB=0.993501;SGB=80.3949;VDB=0.389632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A19G|678|LOC_Os04g32050|protein_coding|CODING|LOC_Os04g32050.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A19G|441|LOC_Os04g32050|protein_coding|CODING|LOC_Os04g32050.2|1|1) FN2420.SNP.4:19226660 chr04:019226660 0 W/19226660-19226660 FN2420 SNP T -> G AC=2;AN=200;BQB=0.675476;DP=5048;DP4=2451,2219,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.57946e-28;MQSB=0.967467;RPB=0.999281;SGB=105.035;VDB=0.279894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2420.SNP.4:19226661 chr04:019226661 0 W/19226661-19226661 FN2420 SNP T -> A AC=2;AN=200;BQB=0.81272;DP=5043;DP4=2525,2204,28,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.22841e-26;MQSB=0.922797;RPB=0.998496;SGB=6.25521;VDB=0.296953;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.4:19226795 chr04:019226795 0 W/19226795-19226795 FN441-S Single Base Substitution G-A INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1718-S.SNP.4:19226916 chr04:019226916 0 W/19226916-19226916 FN1718-S SNP A -> G AC=2;AN=188;BQB=0.866201;DP=3570;DP4=1267,2277,2,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.31876e-07;MQSB=0.999958;RPB=0.0179442;SGB=32.441;VDB=0.013374;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.4:19226916 chr04:019226916 0 W/19226916-19226916 FN441-S Single Base Substitution A-G INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1718-S.SNP.4:19226925 chr04:019226925 0 W/19226925-19226925 FN1718-S SNP A -> G AC=2;AN=188;BQB=0.0117777;DP=3591;DP4=1263,2298,2,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.41207e-06;MQSB=0.994673;RPB=0.296663;SGB=-35.5377;VDB=0.0409749;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.4:19226925 chr04:019226925 0 W/19226925-19226925 FN441-S Single Base Substitution A-G INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3411-S.SNP.4:19240726 chr04:019240726 0 W/19240726-19240726 FN3411-S SNP C -> A AC=1;AN=184;BQB=0.972682;DP=2669;DP4=1329,1269,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.25931e-07;MQSB=0.999745;RPB=0.987536;SGB=48.7425;VDB=0.80797;EFF=UTR_3_PRIME(MODIFIER||34||817|LOC_Os04g32090|protein_coding|CODING|LOC_Os04g32090.1|8|1) FN-265.SNP.4:19247703 chr04:019247703 0 W/19247703-19247703 FN-265 Single Base Substitution G-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2095-S.SNP.4:19248409 chr04:019248409 0 W/19248409-19248409 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.95288;DP=2536;DP4=1227,1262,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.89291e-09;MQSB=0.783982;RPB=0.953698;SGB=4.1907;VDB=0.30914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.4:19256157 chr04:019256157 0 W/19256157-19256157 FN1035-S Single Base Substitution C-G INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1035-S.SNP.4:19256158 chr04:019256158 0 W/19256158-19256158 FN1035-S Single Base Substitution C-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN689-S.SNP.4:19258207 chr04:019258207 0 W/19258207-19258207 FN689-S Single Base Substitution A-C INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-91.SNP.4:19261660 chr04:019261660 0 W/19261660-19261660 FN-91 Single Base Substitution G-A INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN443-S.SNP.4:19266921 chr04:019266921 0 W/19266921-19266921 FN443-S Single Base Substitution G-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN685-S.SNP.4:19272689 chr04:019272689 0 W/19272689-19272689 FN685-S Single Base Substitution G-A INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-92.SNP.4:19273959 chr04:019273959 0 W/19273959-19273959 FN-92 Single Base Substitution C-G INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2691-S.SNP.4:19277503 chr04:019277503 0 W/19277503-19277503 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.999993;DP=4647;DP4=2255,2015,18,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.80126e-11;MQSB=0.916253;RPB=0.924213;SGB=47.7211;VDB=0.816543;EFF=INTRON(MODIFIER||||471|LOC_Os04g32130|protein_coding|CODING|LOC_Os04g32130.1|1|1) FN805-S.SNP.4:19277885 chr04:019277885 0 W/19277885-19277885 FN805-S Single Base Substitution A-G INTRON HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2121-S.SNP.4:19285278 chr04:019285278 0 W/19285278-19285278 FN2121-S SNP A -> G AC=1;AN=168;BQB=0.784957;DP=4199;DP4=2008,2146,14,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22224e-11;MQSB=0.946581;RPB=0.932584;SGB=53.7853;VDB=0.892235;EFF=INTRON(MODIFIER||||247|LOC_Os04g32150|protein_coding|CODING|LOC_Os04g32150.1|6|1) FN1106-S.SNP.4:19298058 chr04:019298058 0 W/19298058-19298058 FN1106-S Single Base Substitution C-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2165-S.SNP.4:19298714 chr04:019298714 0 W/19298714-19298714 FN2165-S SNP C -> G AC=2;AN=168;BQB=0.608576;DP=2430;DP4=465,1928,3,22;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0;MQB=7.0267e-10;MQSB=0.827279;RPB=0.7085;SGB=-71.2065;VDB=0.441178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.4:19300165 chr04:019300165 0 W/19300165-19300165 FN3749-S SNP G -> A AC=1;AN=190;BQB=0.992738;DP=2256;DP4=918,1223,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000531657;MQSB=0.0132899;RPB=0.182134;SGB=18.3316;VDB=0.201783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A126T|389|LOC_Os04g32190|protein_coding|CODING|LOC_Os04g32190.1|1|1) FN2629-S.SNP.4:19302856 chr04:019302856 0 W/19302856-19302856 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.964823;DP=4997;DP4=2268,2447,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03428e-15;MQSB=0.634555;RPB=0.884347;SGB=30.3571;VDB=0.0819738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.4:19304878 chr04:019304878 0 W/19304878-19304878 FN2491 SNP A -> G AC=1;AN=200;BQB=0.500526;DP=5002;DP4=2243,2525,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52948e-13;MQSB=0.857407;RPB=0.994918;SGB=83.5316;VDB=0.441165;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.4:19309449 chr04:019309449 0 W/19309449-19309449 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN440-S.SNP.4:19310891 chr04:019310891 0 W/19310891-19310891 FN440-S Single Base Substitution T-C INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN1197-S.SNP.4:19312377 chr04:019312377 0 W/19312377-19312377 FN1197-S Single Base Substitution C-A INTRON HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1197-S.SNP.4:19312382 chr04:019312382 0 W/19312382-19312382 FN1197-S Single Base Substitution C-T INTRON HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3709-S.SNP.4:19334063 chr04:019334063 0 W/19334063-19334063 FN3709-S SNP G -> T AC=1;AN=190;BQB=0.926677;DP=3099;DP4=1596,1342,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68942e-07;MQSB=0.96612;RPB=0.935535;SGB=44.5415;VDB=0.284215;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.4:19338972 chr04:019338972 0 W/19338972-19338972 FN519-S Single Base Substitution A-T INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN2640-S.SNP.4:19342479 chr04:019342479 0 W/19342479-19342479 FN2640-S SNP T -> C AC=1;AN=200;BQB=0.936687;DP=4969;DP4=2204,2570,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.642e-16;MQSB=0.966229;RPB=0.907428;SGB=79.9264;VDB=0.421969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.4:19348645 chr04:019348645 0 W/19348645-19348645 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.884046;DP=4187;DP4=2097,1901,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.63541e-16;MQSB=0.948229;RPB=0.3063;SGB=123.342;VDB=0.480112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.4:19351278 chr04:019351278 0 W/19351278-19351278 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.999792;DP=4071;DP4=1927,1919,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.64072e-09;MQSB=0.615094;RPB=0.917214;SGB=29.3443;VDB=0.152391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.4:19357202 chr04:019357202 0 W/19357202-19357202 FN1380-S Single Base Substitution T-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1556-S.SNP.4:19371078 chr04:019371078 0 W/19371078-19371078 FN1556-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN448-S.SNP.4:19376735 chr04:019376735 0 W/19376735-19376735 FN448-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g32320 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2705-S.SNP.4:19377320 chr04:019377320 0 W/19377320-19377320 FN2705-S SNP G -> T AC=2;AN=200;BQB=0.994632;DP=4893;DP4=2417,2160,25,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08916e-33;MQSB=0.936016;RPB=0.628595;SGB=133.692;VDB=0.0767299;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.4:19377462 chr04:019377462 0 W/19377462-19377462 FN-292 Single Base Substitution A-C INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN4166-S.SNP.4:19379131 chr04:019379131 0 W/19379131-19379131 FN4166-S SNP T -> A AC=1;AN=170;BQB=0.947388;DP=2464;DP4=1210,1175,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.72432e-05;MQSB=0.990085;RPB=0.867069;SGB=34.5445;VDB=0.650146;EFF=INTRON(MODIFIER||||440|LOC_Os04g32330|protein_coding|CODING|LOC_Os04g32330.1|1|1),INTRON(MODIFIER||||439|LOC_Os04g32330|protein_coding|CODING|LOC_Os04g32330.2|1|1) FN3932-S.SNP.4:19380676 chr04:019380676 0 W/19380676-19380676 FN3932-S SNP C -> A AC=2;AN=158;BQB=0.990608;DP=2150;DP4=1145,873,14,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.33667e-12;MQSB=0.997775;RPB=0.753589;SGB=64.3985;VDB=0.662727;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H157N|440|LOC_Os04g32330|protein_coding|CODING|LOC_Os04g32330.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H156N|439|LOC_Os04g32330|protein_coding|CODING|LOC_Os04g32330.2|8|1) FN4093-S.SNP.4:19395420 chr04:019395420 0 W/19395420-19395420 FN4093-S SNP A -> T AC=1;AN=182;BQB=0.741253;DP=8720;DP4=4551,3925,17,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.5365e-15;MQSB=0.734104;RPB=0.832619;SGB=58.2961;VDB=0.933609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.4:19398925 chr04:019398925 0 W/19398925-19398925 FN1203-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN2729-S.SNP.4:19406370 chr04:019406370 0 W/19406370-19406370 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.999075;DP=4537;DP4=1938,2250,9,3;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0617148;MQB=0.0162108;MQSB=2.55585e-12;RPB=0.917147;SGB=33.0593;VDB=0.0475124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.4:19408114 chr04:019408114 0 W/19408114-19408114 FN2584-S SNP C -> T AC=2;AN=198;BQB=0.233794;DP=4421;DP4=2256,1902,31,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.48083e-30;MQSB=0.999874;RPB=0.768992;SGB=63.5835;VDB=0.0102439;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.4:19410072 chr04:019410072 0 W/19410072-19410072 FN836-S Single Base Substitution A-G INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1381-S.SNP.4:19422479 chr04:019422479 0 W/19422479-19422479 FN1381-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2660-S.SNP.4:19428291 chr04:019428291 0 W/19428291-19428291 FN2660-S SNP C -> G AC=2;AN=200;BQB=0.916008;DP=4522;DP4=2236,1928,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.19243e-21;MQSB=0.814754;RPB=0.444995;SGB=130.399;VDB=0.222473;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.4:19428464 chr04:019428464 0 W/19428464-19428464 FN475-S Single Base Substitution C-T INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN3058-S.SNP.4:19447001 chr04:019447001 0 W/19447001-19447001 FN3058-S SNP A -> C AC=1;AN=184;BQB=0.528093;DP=3032;DP4=1387,1562,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48448e-07;MQSB=0.454964;RPB=0.922252;SGB=71.3514;VDB=0.665071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.4:19453073 chr04:019453073 0 W/19453073-19453073 FN1302-S Single Base Substitution C-T INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN857-S.SNP.4:19455058 chr04:019455058 0 W/19455058-19455058 FN857-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN522-S.SNP.4:19456729 chr04:019456729 0 W/19456729-19456729 FN522-S Single Base Substitution C-T INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN851-S.SNP.4:19458556 chr04:019458556 0 W/19458556-19458556 FN851-S Single Base Substitution G-A INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2374.SNP.4:19461748 chr04:019461748 0 W/19461748-19461748 FN2374 SNP C -> A AC=1;AN=192;BQB=0.591947;DP=4959;DP4=2236,2328,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.93019e-18;MQSB=0.921592;RPB=0.414783;SGB=-108.11;VDB=0.929017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:19462099 chr04:019462099 0 W/19462099-19462099 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.95956;DP=4937;DP4=2177,2440,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20337e-15;MQSB=0.672221;RPB=0.882488;SGB=27.1468;VDB=0.594526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.4:19463314 chr04:019463314 0 W/19463314-19463314 FN2215-S SNP G -> A AC=1;AN=186;BQB=0.397783;DP=668;DP4=4,613,0,7;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=0.000437111;MQSB=0.942217;RPB=0.979092;SGB=26.3271;VDB=0.00136852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.4:19475170 chr04:019475170 0 W/19475170-19475170 FN2281 SNP G -> A AC=1;AN=192;BQB=0.493581;DP=5092;DP4=2411,1996,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.90182e-21;MQSB=0.92075;RPB=0.915748;SGB=32.3844;VDB=0.088688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.4:19475171 chr04:019475171 0 W/19475171-19475171 FN2281 SNP C -> A AC=1;AN=192;BQB=0.976247;DP=5104;DP4=2539,1990,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.10672e-19;MQSB=0.976822;RPB=0.841489;SGB=-5.17475;VDB=0.18001;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.4:19478056 chr04:019478056 0 W/19478056-19478056 FN-137 Single Base Substitution C-T INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN962-S.SNP.4:19480948 chr04:019480948 0 W/19480948-19480948 FN962-S Single Base Substitution C-T INTRON HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN962-S.SNP.4:19480949 chr04:019480949 0 W/19480949-19480949 FN962-S Single Base Substitution C-T INTRON HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3955-S.SNP.4:19486624 chr04:019486624 0 W/19486624-19486624 FN3955-S SNP A -> G AC=1;AN=168;BQB=0.989462;DP=2363;DP4=1234,1049,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.49192e-07;MQSB=0.995915;RPB=0.740704;SGB=43.3113;VDB=0.638963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.4:19486841 chr04:019486841 0 W/19486841-19486841 FN1042-S Single Base Substitution G-A INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1345-S.SNP.4:19494658 chr04:019494658 0 W/19494658-19494658 FN1345-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3110-S.SNP.4:19504688 chr04:019504688 0 W/19504688-19504688 FN3110-S SNP C -> A AC=1;AN=184;BQB=0.995304;DP=2339;DP4=999,1256,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000353719;MQSB=0.423233;RPB=0.972585;SGB=30.6558;VDB=0.853153;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A14|365|LOC_Os04g32490|protein_coding|CODING|LOC_Os04g32490.2|1|1) FN_772-3-1.SNP.4:19516834 chr04:019516834 0 W/19516834-19516834 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2450.SNP.4:19519570 chr04:019519570 0 W/19519570-19519570 FN2450 SNP G -> A AC=1;AN=200;BQB=0.830856;DP=4621;DP4=2284,2055,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.50375e-13;MQSB=0.941631;RPB=0.9848;SGB=69.1109;VDB=0.870084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.4:19519915 chr04:019519915 0 W/19519915-19519915 FN2086-S SNP T -> A AC=1;AN=168;BQB=0.988419;DP=3722;DP4=1848,1788,14,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.07152e-18;MQSB=0.926504;RPB=0.895191;SGB=31.3762;VDB=0.113937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.4:19519916 chr04:019519916 0 W/19519916-19519916 FN2086-S SNP C -> A AC=1;AN=168;BQB=0.364114;DP=3723;DP4=1855,1777,20,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9384e-20;MQSB=0.929413;RPB=0.771434;SGB=-336.576;VDB=0.391979;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.4:19528332 chr04:019528332 0 W/19528332-19528332 FN1407-S Single Base Substitution C-T INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2578-S.SNP.4:19528953 chr04:019528953 0 W/19528953-19528953 FN2578-S SNP A -> G AC=1;AN=198;BQB=0.999116;DP=3825;DP4=2242,1337,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00655942;MQSB=0.375985;RPB=0.355167;SGB=8.58354;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.4:19529948 chr04:019529948 0 W/19529948-19529948 FN880-S Single Base Substitution G-C INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1455-S.SNP.4:19531935 chr04:019531935 0 W/19531935-19531935 FN1455-S Single Base Substitution T-C INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1749-S.SNP.4:19532859 chr04:019532859 0 W/19532859-19532859 FN1749-S SNP C -> A AC=1;AN=188;BQB=0.89198;DP=3046;DP4=1209,1807,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.45366e-06;MQSB=0.996851;RPB=0.365328;SGB=2.45162;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.4:19536458 chr04:019536458 0 W/19536458-19536458 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN776-S.SNP.4:19540323 chr04:019540323 0 W/19540323-19540323 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3345-S.SNP.4:19541831 chr04:019541831 0 W/19541831-19541831 FN3345-S SNP G -> A AC=2;AN=184;BQB=0.659809;DP=3040;DP4=1384,1523,20,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.78294e-20;MQSB=0.988299;RPB=0.989849;SGB=175.352;VDB=0.241556;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S148|241|LOC_Os04g32500|protein_coding|CODING|LOC_Os04g32500.1|2|1) FN3666-S.SNP.4:19541898 chr04:019541898 0 W/19541898-19541898 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.887047;DP=2731;DP4=1433,1154,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37769e-07;MQSB=0.96734;RPB=0.54592;SGB=44.5415;VDB=0.579002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q126R|241|LOC_Os04g32500|protein_coding|CODING|LOC_Os04g32500.1|2|1) FN1058-S.SNP.4:19542456 chr04:019542456 0 W/19542456-19542456 FN1058-S Single Base Substitution C-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2106-S.SNP.4:19543757 chr04:019543757 0 W/19543757-19543757 FN2106-S SNP A -> G AC=2;AN=168;BQB=0.52676;DP=3339;DP4=1575,1709,22,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.48065e-15;MQSB=0.810783;RPB=0.90883;SGB=-139.169;VDB=0.242837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.4:19559000 chr04:019559000 0 W/19559000-19559000 FN1320-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2233-S.SNP.4:19562753 chr04:019562753 0 W/19562753-19562753 FN2233-S SNP A -> G AC=1;AN=190;BQB=0.259512;DP=4505;DP4=1961,1998,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.4034e-08;MQSB=0.850523;RPB=0.14659;SGB=-15.4375;VDB=0.847798;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.4:19565330 chr04:019565330 0 W/19565330-19565330 FN903-S Single Base Substitution A-T INTRON HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN4184-S.SNP.4:19566945 chr04:019566945 0 W/19566945-19566945 FN4184-S SNP G -> A AC=2;AN=170;BQB=0.987955;DP=2158;DP4=1042,1043,7,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.39607e-10;MQSB=0.993666;RPB=0.999491;SGB=48.6486;VDB=0.208523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.4:19567907 chr04:019567907 0 W/19567907-19567907 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.6346;DP=2768;DP4=1489,1185,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.32761e-07;MQSB=0.971389;RPB=0.801394;SGB=71.6954;VDB=0.672348;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.4:19578625 chr04:019578625 0 W/19578625-19578625 FN-394 Single Base Substitution A-C INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2691-S.SNP.4:19582073 chr04:019582073 0 W/19582073-19582073 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.83494;DP=4304;DP4=2071,1965,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.6978e-06;MQSB=0.333891;RPB=0.450078;SGB=29.4541;VDB=0.509155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.4:19584222 chr04:019584222 0 W/19584222-19584222 FN1690-S SNP A -> C AC=1;AN=188;BQB=0.000202879;DP=4161;DP4=2312,1816,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.90059e-05;MQSB=0.986863;RPB=0.896742;SGB=-35.5377;VDB=0.4157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.4:19589719 chr04:019589719 0 W/19589719-19589719 FN2298 SNP A -> G AC=1;AN=192;BQB=0.244595;DP=5368;DP4=2451,2417,17,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.00574e-23;MQSB=0.956605;RPB=0.961105;SGB=181.577;VDB=0.876183;EFF=INTERGENIC(MODIFIER||||||||||1) FN-28.SNP.4:19590370 chr04:019590370 0 W/19590370-19590370 FN-28 Single Base Substitution T-A INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN4112-S.SNP.4:19592415 chr04:019592415 0 W/19592415-19592415 FN4112-S SNP A -> G AC=2;AN=182;BQB=0.536645;DP=3272;DP4=1418,1624,13,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.9248e-09;MQSB=0.999758;RPB=0.23029;SGB=81.2689;VDB=0.341233;EFF=INTRON(MODIFIER||||470|LOC_Os04g32540|protein_coding|CODING|LOC_Os04g32540.1|1|1) FN1315-S.SNP.4:19594722 chr04:019594722 0 W/19594722-19594722 FN1315-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN811-S.SNP.4:19595768 chr04:019595768 0 W/19595768-19595768 FN811-S Single Base Substitution T-C INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN945-S.SNP.4:19598759 chr04:019598759 0 W/19598759-19598759 FN945-S Single Base Substitution G-A INTRON HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN3394-S.SNP.4:19600623 chr04:019600623 0 W/19600623-19600623 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.94781;DP=2803;DP4=1231,1493,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.84299e-09;MQSB=0.925727;RPB=0.957263;SGB=57.786;VDB=0.851906;EFF=UTR_3_PRIME(MODIFIER||80||114|LOC_Os04g32550|protein_coding|CODING|LOC_Os04g32550.1|6|1) FN811-S.SNP.4:19601359 chr04:019601359 0 W/19601359-19601359 FN811-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN811-S.SNP.4:19601360 chr04:019601360 0 W/19601360-19601360 FN811-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN833-S.SNP.4:19609452 chr04:019609452 0 W/19609452-19609452 FN833-S Single Base Substitution T-C INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3477-S.SNP.4:19609660 chr04:019609660 0 W/19609660-19609660 FN3477-S SNP G -> T AC=2;AN=184;BQB=0.973136;DP=2795;DP4=1361,1332,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.22489e-19;MQSB=0.645426;RPB=0.830692;SGB=157.265;VDB=0.443777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.4:19611566 chr04:019611566 0 W/19611566-19611566 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.979268;DP=4930;DP4=2488,2206,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.73411e-05;MQSB=0.982194;RPB=0.953631;SGB=35.8441;VDB=0.21691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L183F|478|LOC_Os04g32580|protein_coding|CODING|LOC_Os04g32580.1|2|1) FN-169.SNP.4:19614018 chr04:019614018 0 W/19614018-19614018 FN-169 Single Base Substitution C-T INTRON HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4133-S.SNP.4:19614984 chr04:019614984 0 W/19614984-19614984 FN4133-S SNP A -> C AC=1;AN=182;BQB=0.896476;DP=2523;DP4=1072,1330,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.22621e-06;MQSB=0.504764;RPB=0.855819;SGB=32.1169;VDB=0.637461;EFF=INTRON(MODIFIER||||329|LOC_Os04g32590|protein_coding|CODING|LOC_Os04g32590.1|1|1) FN1553-S.SNP.4:19618875 chr04:019618875 0 W/19618875-19618875 FN1553-S Single Base Substitution G-A INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2630-S.SNP.4:19627165 chr04:019627165 0 W/19627165-19627165 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.966228;DP=4822;DP4=2059,2376,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3926e-07;MQSB=0.725597;RPB=0.71529;SGB=72.6852;VDB=0.422455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.4:19633397 chr04:019633397 0 W/19633397-19633397 FN1319-S Single Base Substitution T-A INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN410-S.SNP.4:19636851 chr04:019636851 0 W/19636851-19636851 FN410-S Single Base Substitution C-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN476-S.SNP.4:19638473 chr04:019638473 0 W/19638473-19638473 FN476-S Single Base Substitution T-C INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN490-S.SNP.4:19640934 chr04:019640934 0 W/19640934-19640934 FN490-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN403-S.SNP.4:19645173 chr04:019645173 0 W/19645173-19645173 FN403-S Single Base Substitution G-A INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN835-S.SNP.4:19645806 chr04:019645806 0 W/19645806-19645806 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN906-S.SNP.4:19648492 chr04:019648492 0 W/19648492-19648492 FN906-S Single Base Substitution G-A INTERGENIC HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2247-S.SNP.4:19651122 chr04:019651122 0 W/19651122-19651122 FN2247-S SNP C -> A AC=2;AN=190;BQB=0.831454;DP=4507;DP4=1892,2075,26,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81962e-27;MQSB=0.0602257;RPB=0.574742;SGB=58.4968;VDB=0.840107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.4:19654164 chr04:019654164 0 W/19654164-19654164 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.278084;DP=3824;DP4=1850,1927,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.01597e-08;MQSB=0.995421;RPB=0.991577;SGB=-41.7816;VDB=0.184174;EFF=UTR_3_PRIME(MODIFIER||693||268|LOC_Os04g32620|protein_coding|CODING|LOC_Os04g32620.1|2|1) FN-71.SNP.4:19656896 chr04:019656896 0 W/19656896-19656896 FN-71 Single Base Substitution A-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-71.SNP.4:19656897 chr04:019656897 0 W/19656897-19656897 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3354-S.SNP.4:19660086 chr04:019660086 0 W/19660086-19660086 FN3354-S SNP A -> C AC=1;AN=184;BQB=0.988218;DP=2219;DP4=843,1312,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.16968e-06;MQSB=0.71092;RPB=0.966477;SGB=21.6609;VDB=0.532922;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.4:19663786 chr04:019663786 0 W/19663786-19663786 FN-149 Single Base Substitution G-A INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN4158-S.SNP.4:19664023 chr04:019664023 0 W/19664023-19664023 FN4158-S SNP A -> G AC=1;AN=170;BQB=0.917873;DP=2512;DP4=1370,969,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.61339e-07;MQSB=0.380501;RPB=0.53664;SGB=62.4192;VDB=0.261151;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.4:19679414 chr04:019679414 0 W/19679414-19679414 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.945763;DP=2917;DP4=1550,1295,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.0042e-07;MQSB=0.968044;RPB=0.860753;SGB=25.0952;VDB=0.783267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T353M|673|LOC_Os04g32650|protein_coding|CODING|LOC_Os04g32650.1|5|1) FN3698-S.SNP.4:19680168 chr04:019680168 0 W/19680168-19680168 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.733242;DP=3056;DP4=1424,1534,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85265e-07;MQSB=0.977295;RPB=0.293899;SGB=13.4442;VDB=0.426414;EFF=INTRON(MODIFIER||||673|LOC_Os04g32650|protein_coding|CODING|LOC_Os04g32650.1|6|1) FN1709-S.SNP.4:19692472 chr04:019692472 0 W/19692472-19692472 FN1709-S SNP G -> A AC=2;AN=188;BQB=0.727249;DP=3408;DP4=1451,1894,15,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65761e-15;MQSB=0.965258;RPB=0.744914;SGB=-89.5799;VDB=0.150955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D238N|420|LOC_Os04g32670|protein_coding|CODING|LOC_Os04g32670.1|3|1) FN1033-S.SNP.4:19694684 chr04:019694684 0 W/19694684-19694684 FN1033-S Single Base Substitution T-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4001-S.SNP.4:19711090 chr04:019711090 0 W/19711090-19711090 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.907809;DP=2159;DP4=1328,690,12,1;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000463177;MQB=0.000113636;MQSB=0.00345219;RPB=0.999892;SGB=34.748;VDB=0.445805;EFF=UTR_3_PRIME(MODIFIER||12||112|LOC_Os04g32700|protein_coding|CODING|LOC_Os04g32700.1|1|1) FN4234-S.SNP.4:19711691 chr04:019711691 0 W/19711691-19711691 FN4234-S SNP T -> C AC=1;AN=170;BQB=0.914899;DP=2483;DP4=1254,1110,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=2.02485e-06;MQSB=0.760251;RPB=0.847974;SGB=22.3266;VDB=0.954584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.4:19719919 chr04:019719919 0 W/19719919-19719919 FN-189 Single Base Substitution G-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1249-S.SNP.4:19723564 chr04:019723564 0 W/19723564-19723564 FN1249-S Single Base Substitution A-G INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN972-S.SNP.4:19742876 chr04:019742876 0 W/19742876-19742876 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2359.SNP.4:19754712 chr04:019754712 0 W/19754712-19754712 FN2359 SNP G -> T AC=1;AN=192;BQB=0.894065;DP=4413;DP4=2052,2099,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00815772;MQB=2.0994e-05;MQSB=0.951512;RPB=0.993341;SGB=23.7852;VDB=0.888862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L173I|1475|LOC_Os04g32750|protein_coding|CODING|LOC_Os04g32750.1|1|1) FN3437-S.SNP.4:19756619 chr04:019756619 0 W/19756619-19756619 FN3437-S SNP A -> T AC=2;AN=184;BQB=0.755532;DP=2667;DP4=1573,940,10,4;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00599925;MQB=0.654758;MQSB=0.987935;RPB=0.176321;SGB=39.2697;VDB=0.563024;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.4:19760479 chr04:019760479 0 W/19760479-19760479 FN-332 Single Base Substitution C-T INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1276-S.SNP.4:19765440 chr04:019765440 0 W/19765440-19765440 FN1276-S Single Base Substitution C-T INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN963-S.SNP.4:19768192 chr04:019768192 0 W/19768192-19768192 FN963-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g32770 retrotransposon protein, putative, unclassified, expressed SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3837-S.SNP.4:19776621 chr04:019776621 0 W/19776621-19776621 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.920125;DP=3112;DP4=1571,1435,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7245e-12;MQSB=0.958435;RPB=0.997656;SGB=80.9724;VDB=0.888746;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.4:19777016 chr04:019777016 0 W/19777016-19777016 FN-76 Single Base Substitution G-C INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1681-S.SNP.4:19777305 chr04:019777305 0 W/19777305-19777305 FN1681-S SNP T -> C AC=2;AN=188;BQB=0.0466941;DP=3672;DP4=1836,1773,29,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.07286e-18;MQSB=0.807229;RPB=0.769008;SGB=53.3803;VDB=0.941441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.4:19787876 chr04:019787876 0 W/19787876-19787876 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.994345;DP=5213;DP4=2356,2517,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.69492e-16;MQSB=0.937422;RPB=0.201957;SGB=52.9314;VDB=0.0490356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.4:19800127 chr04:019800127 0 W/19800127-19800127 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.45672;DP=4550;DP4=2126,2112,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23708e-08;MQSB=0.670153;RPB=1;SGB=21.6694;VDB=0.838961;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.4:19800939 chr04:019800939 0 W/19800939-19800939 W42-1-3S-1 Single Base Substitution G-T INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN810-S.SNP.4:19806264 chr04:019806264 0 W/19806264-19806264 FN810-S Single Base Substitution C-T INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-115.SNP.4:19809727 chr04:019809727 0 W/19809727-19809727 FN-115 Single Base Substitution A-G INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2621-S.SNP.4:19810747 chr04:019810747 0 W/19810747-19810747 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.475016;DP=4507;DP4=2423,1865,16,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.03507e-10;MQSB=0.00950717;RPB=0.986353;SGB=63.3521;VDB=0.79423;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.4:19815430 chr04:019815430 0 W/19815430-19815430 FN1219-S Single Base Substitution G-T INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3520-S.SNP.4:19825245 chr04:019825245 0 W/19825245-19825245 FN3520-S SNP A -> G AC=1;AN=188;BQB=0.965513;DP=2584;DP4=1342,1182,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02369e-08;MQSB=0.95871;RPB=0.443775;SGB=62.6088;VDB=0.38995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.4:19829288 chr04:019829288 0 W/19829288-19829288 FN2440 SNP G -> A AC=1;AN=200;BQB=0.673944;DP=4352;DP4=2156,1904,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85856e-06;MQSB=0.669616;RPB=0.993673;SGB=21.6694;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3581-S.SNP.4:19829577 chr04:019829577 0 W/19829577-19829577 FN3581-S SNP A -> T AC=1;AN=190;BQB=0.869984;DP=3046;DP4=1581,1367,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67777e-05;MQSB=0.95987;RPB=0.879136;SGB=39.9877;VDB=0.869737;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.4:19830044 chr04:019830044 0 W/19830044-19830044 FN999-S Single Base Substitution T-A INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3516-S.SNP.4:19832690 chr04:019832690 0 W/19832690-19832690 FN3516-S SNP T -> A AC=2;AN=188;BQB=0.787588;DP=2849;DP4=1401,1333,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000351;MQB=2.48441e-16;MQSB=0.779858;RPB=0.165211;SGB=85.5904;VDB=0.0440261;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.4:19841436 chr04:019841436 0 W/19841436-19841436 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.985956;DP=2156;DP4=1075,1019,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.21675e-05;MQSB=0.91182;RPB=0.983309;SGB=25.6601;VDB=0.93496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.4:19848142 chr04:019848142 0 W/19848142-19848142 FN2218-S SNP C -> G AC=1;AN=190;BQB=0.838574;DP=5173;DP4=2436,2392,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72094e-12;MQSB=0.858738;RPB=0.416155;SGB=18.096;VDB=0.44824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.4:19851757 chr04:019851757 0 W/19851757-19851757 FN1236-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g32880 CBS domain containing membrane protein, putative, expressed SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN588-S.SNP.4:19857119 chr04:019857119 0 W/19857119-19857119 FN588-S Single Base Substitution T-C INTRON HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2453.SNP.4:19858874 chr04:019858874 0 W/19858874-19858874 FN2453 SNP A -> G AC=1;AN=200;BQB=0.453359;DP=2882;DP4=1028,1252,21,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000693963;MQB=7.27616e-07;MQSB=2.20221e-09;RPB=0.00276665;SGB=-73.6537;VDB=0.393536;EFF=UTR_5_PRIME(MODIFIER||3088||346|LOC_Os04g32880|protein_coding|CODING|LOC_Os04g32880.4|1|1),UTR_5_PRIME(MODIFIER||208||451|LOC_Os04g32880|protein_coding|CODING|LOC_Os04g32880.1|1|1),UTR_5_PRIME(MODIFIER||208||451|LOC_Os04g32880|protein_coding|CODING|LOC_Os04g32880.2|1|1),UTR_5_PRIME(MODIFIER||208||405|LOC_Os04g32880|protein_coding|CODING|LOC_Os04g32880.3|1|1),UTR_5_PRIME(MODIFIER||208||368|LOC_Os04g32880|protein_coding|CODING|LOC_Os04g32880.5|1|1) FN3695-S.SNP.4:19865250 chr04:019865250 0 W/19865250-19865250 FN3695-S SNP G -> A AC=2;AN=190;BQB=0.741518;DP=2942;DP4=1537,1245,18,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000339905;MQB=2.73386e-12;MQSB=0.95688;RPB=0.737409;SGB=117.403;VDB=0.787339;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.4:19868053 chr04:019868053 0 W/19868053-19868053 FN2243-S SNP G -> C AC=1;AN=190;BQB=0.342698;DP=3333;DP4=1720,1372,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00030003;MQB=6.33488e-09;MQSB=0.0446732;RPB=0.159832;SGB=67.3108;VDB=0.194707;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.4:19874650 chr04:019874650 0 W/19874650-19874650 FN806-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g32900 transposon protein, putative, unclassified SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN2417.SNP.4:19879224 chr04:019879224 0 W/19879224-19879224 FN2417 SNP G -> A AC=1;AN=200;BQB=0.688069;DP=4650;DP4=2037,2282,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01742e-06;MQSB=0.652211;RPB=0.934183;SGB=1.46408;VDB=0.854919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.4:19883501 chr04:019883501 0 W/19883501-19883501 FN-265 Single Base Substitution G-A INTRON HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1117-S.SNP.4:19887942 chr04:019887942 0 W/19887942-19887942 FN1117-S Single Base Substitution A-G START_GAINED HET LOC_Os04g32920 potassium transporter, putative, expressed SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-299.SNP.4:19890914 chr04:019890914 0 W/19890914-19890914 FN-299 Single Base Substitution G-T INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1475-S.SNP.4:19896923 chr04:019896923 0 W/19896923-19896923 FN1475-S Single Base Substitution C-T INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2335.SNP.4:19898211 chr04:019898211 0 W/19898211-19898211 FN2335 SNP A -> T AC=1;AN=192;BQB=0.969721;DP=5478;DP4=2478,2464,10,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.5399e-16;MQSB=0.977897;RPB=0.601496;SGB=-7.9965;VDB=0.166605;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.4:19901204 chr04:019901204 0 W/19901204-19901204 FN-122 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g32940 Leucine Rich Repeat family protein, expressed SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1295-S.SNP.4:19901582 chr04:019901582 0 W/19901582-19901582 FN1295-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g32940 Leucine Rich Repeat family protein, expressed SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4011-S.SNP.4:19903709 chr04:019903709 0 W/19903709-19903709 FN4011-S SNP C -> T AC=2;AN=168;BQB=0.304474;DP=2213;DP4=966,1149,12,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.17313e-12;MQSB=0.814371;RPB=0.707623;SGB=131.927;VDB=0.879118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.4:19905347 chr04:019905347 0 W/19905347-19905347 FN2455 SNP G -> A AC=1;AN=200;BQB=0.783141;DP=4853;DP4=2582,1951,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206058;MQB=4.47246e-11;MQSB=0.95891;RPB=0.982394;SGB=39.9056;VDB=0.187371;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.4:19906477 chr04:019906477 0 W/19906477-19906477 FN979-S Single Base Substitution C-T INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN-399.SNP.4:19919992 chr04:019919992 0 W/19919992-19919992 FN-399 Single Base Substitution G-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN1152-S.SNP.4:19920199 chr04:019920199 0 W/19920199-19920199 FN1152-S Single Base Substitution C-T INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2662-S.SNP.4:19930828 chr04:019930828 0 W/19930828-19930828 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.994667;DP=4556;DP4=2037,2234,9,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14503e-16;MQSB=0.97449;RPB=0.915427;SGB=127.947;VDB=0.395399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.4:19938193 chr04:019938193 0 W/19938193-19938193 FN2279-S SNP G -> T AC=1;AN=190;BQB=0.614896;DP=4797;DP4=2072,2419,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33997e-11;MQSB=0.929666;RPB=0.919491;SGB=33.8752;VDB=0.364623;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN-129 Single Base Substitution G-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-277.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN-277 Single Base Substitution G-T INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-303.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN-303 Single Base Substitution G-T INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-70.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN-70 Single Base Substitution G-T INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1216-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN1216-S Single Base Substitution G-T INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1399-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN1399-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1652-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN1652-S Single Base Substitution G-T INTERGENIC Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2473.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN2473 SNP G -> T AC=2;AN=200;BQB=0.999211;DP=3552;DP4=1805,1461,13,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.9768e-14;MQSB=0.956391;RPB=0.939399;SGB=109.527;VDB=0.933007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN3363-S SNP G -> T AC=2;AN=184;BQB=0.760143;DP=2574;DP4=1319,1154,14,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.00921e-10;MQSB=0.700147;RPB=0.973681;SGB=84.9167;VDB=0.30385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN3569-S SNP G -> T AC=2;AN=188;BQB=0.504584;DP=2816;DP4=1451,1261,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.62684e-18;MQSB=0.482352;RPB=0.483087;SGB=128.11;VDB=0.960737;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN3923-S SNP G -> T AC=2;AN=158;BQB=0.999345;DP=2108;DP4=1134,881,11,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.05516e-11;MQSB=0.705392;RPB=0.540055;SGB=61.029;VDB=0.928246;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN417-S Single Base Substitution G-T INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN4247-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN4247-S SNP G -> T AC=2;AN=170;BQB=0.864515;DP=2223;DP4=1184,946,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.49555e-12;MQSB=0.390057;RPB=0.994594;SGB=110.069;VDB=0.339025;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN561-S Single Base Substitution G-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN721-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN721-S Single Base Substitution G-T INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN796-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN796-S Single Base Substitution G-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN960-S.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN960-S Single Base Substitution G-T INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN_826-4-1.SNP.4:19950274 chr04:019950274 0 W/19950274-19950274 FN_826-4-1 Single Base Substitution G-T Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN1263-S.SNP.4:19955200 chr04:019955200 0 W/19955200-19955200 FN1263-S Single Base Substitution G-C INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN4090-S.SNP.4:19958108 chr04:019958108 0 W/19958108-19958108 FN4090-S SNP G -> C AC=1;AN=182;BQB=0.995855;DP=2608;DP4=1255,1260,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=0.00054261;MQSB=5.5378e-07;RPB=0.513924;SGB=44.1115;VDB=0.541069;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.4:19958953 chr04:019958953 0 W/19958953-19958953 FN4229-S SNP A -> G AC=1;AN=170;BQB=0.835473;DP=2651;DP4=1226,1308,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.95395e-07;MQSB=0.961964;RPB=0.860758;SGB=38.987;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.4:19960065 chr04:019960065 0 W/19960065-19960065 FN2473 SNP A -> C AC=1;AN=200;BQB=0.869781;DP=4905;DP4=2404,2294,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27846e-11;MQSB=0.989452;RPB=0.78435;SGB=77.2904;VDB=0.571015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.4:19960823 chr04:019960823 0 W/19960823-19960823 FN2678-S SNP C -> A AC=1;AN=200;BQB=0.492105;DP=5113;DP4=2229,2606,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.54819e-07;MQSB=0.785803;RPB=0.997872;SGB=16.4591;VDB=0.229729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.4:19966157 chr04:019966157 0 W/19966157-19966157 FN1116-S Single Base Substitution T-C INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN2350.SNP.4:19985166 chr04:019985166 0 W/19985166-19985166 FN2350 SNP T -> C AC=1;AN=192;BQB=0.993841;DP=4477;DP4=2013,1931,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=0.0001769;MQSB=0.503371;RPB=0.864301;SGB=21.4339;VDB=0.911042;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.4:19990480 chr04:019990480 0 W/19990480-19990480 FN489-S Single Base Substitution T-A INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1446-S.SNP.4:19993380 chr04:019993380 0 W/19993380-19993380 FN1446-S Single Base Substitution T-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1643-S.SNP.4:19997521 chr04:019997521 0 W/19997521-19997521 FN1643-S Single Base Substitution A-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN460-S.SNP.4:20007915 chr04:020007915 0 W/20007915-20007915 FN460-S Single Base Substitution C-T INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2646-S.SNP.4:20009650 chr04:020009650 0 W/20009650-20009650 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.612787;DP=5030;DP4=2255,2458,9,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.40428e-08;MQSB=2.09535e-10;RPB=0.971219;SGB=95.7111;VDB=0.883783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.4:20011748 chr04:020011748 0 W/20011748-20011748 FN-52 Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2687-S.SNP.4:20033703 chr04:020033703 0 W/20033703-20033703 FN2687-S SNP A -> G AC=1;AN=200;BQB=0.933198;DP=5290;DP4=2794,2259,7,12;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0026465;MQB=8.80433e-06;MQSB=0;RPB=0.855374;SGB=81.8956;VDB=0.206122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.4:20033712 chr04:020033712 0 W/20033712-20033712 FN2687-S SNP G -> A AC=1;AN=200;BQB=0.972213;DP=5274;DP4=2674,2319,8,12;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00265453;MQB=2.3385e-05;MQSB=9.80909e-45;RPB=0.999136;SGB=61.9006;VDB=0.440643;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.4:20049954 chr04:020049954 0 W/20049954-20049954 FN888-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g33120 retrotransposon protein, putative, unclassified, expressed SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1046-S.SNP.4:20051518 chr04:020051518 0 W/20051518-20051518 FN1046-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g33120 retrotransposon protein, putative, unclassified, expressed SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3381-S.SNP.4:20052880 chr04:020052880 0 W/20052880-20052880 FN3381-S SNP C -> T AC=2;AN=184;BQB=0.950255;DP=2704;DP4=1254,1320,12,12;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.0210799;MQB=1.74497e-05;MQSB=0.618904;RPB=0.827702;SGB=74.4875;VDB=0.134382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G213D|934|LOC_Os04g33120|protein_coding|CODING|LOC_Os04g33120.1|1|1) FN3381-S.SNP.4:20052881 chr04:020052881 0 W/20052881-20052881 FN3381-S SNP C -> T AC=2;AN=184;BQB=0.684097;DP=2714;DP4=1270,1333,15,13;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.0213707;MQB=0.000170001;MQSB=0.346488;RPB=0.354774;SGB=23.542;VDB=0.161891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G213S|934|LOC_Os04g33120|protein_coding|CODING|LOC_Os04g33120.1|1|1) FN2555-S.SNP.4:20058198 chr04:020058198 0 W/20058198-20058198 FN2555-S SNP A -> T AC=1;AN=198;BQB=0.47897;DP=3251;DP4=1983,1052,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0790526;MQB=0.158987;MQSB=2.46773e-28;RPB=0.991521;SGB=58.1246;VDB=0.267899;EFF=INTRON(MODIFIER||||128|LOC_Os04g33130|protein_coding|CODING|LOC_Os04g33130.1|1|1) FN1537-S.SNP.4:20076997 chr04:020076997 0 W/20076997-20076997 FN1537-S Single Base Substitution G-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1315-S.SNP.4:20080023 chr04:020080023 0 W/20080023-20080023 FN1315-S Single Base Substitution C-T INTRON HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN3447-S.SNP.4:20090554 chr04:020090554 0 W/20090554-20090554 FN3447-S SNP A -> C AC=1;AN=184;BQB=0.980623;DP=3409;DP4=1470,1847,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.0063163;MQSB=0.00207863;RPB=0.871538;SGB=39.699;VDB=0.26659;EFF=INTRON(MODIFIER||||447|LOC_Os04g33200|protein_coding|CODING|LOC_Os04g33200.1|2|1) FN587-S.SNP.4:20091669 chr04:020091669 0 W/20091669-20091669 FN587-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN1195-S.SNP.4:20099815 chr04:020099815 0 W/20099815-20099815 FN1195-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2435.SNP.4:20104508 chr04:020104508 0 W/20104508-20104508 FN2435 SNP T -> C AC=1;AN=200;BQB=0.674094;DP=3698;DP4=1518,1699,9,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000270416;MQB=8.54888e-07;MQSB=0.00490051;RPB=0.947238;SGB=91.1059;VDB=0.0791251;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.4:20110442 chr04:020110442 0 W/20110442-20110442 FN4122-S SNP T -> C AC=1;AN=182;BQB=0.801993;DP=3132;DP4=1474,1405,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=5.12129e-06;MQSB=0.211004;RPB=0.998971;SGB=-14.8449;VDB=0.0983398;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q44|275|LOC_Os04g33240|protein_coding|CODING|LOC_Os04g33240.1|2|1) FN2622-S.SNP.4:20120254 chr04:020120254 0 W/20120254-20120254 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.597572;DP=3508;DP4=1570,1682,8,8;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.000285063;MQB=0.709447;MQSB=5.79692e-07;RPB=0.615131;SGB=26.8797;VDB=0.184881;EFF=INTRON(MODIFIER||||568|LOC_Os04g33260|protein_coding|CODING|LOC_Os04g33260.1|1|1) FN2380.SNP.4:20130884 chr04:020130884 0 W/20130884-20130884 FN2380 SNP C -> A AC=1;AN=192;BQB=0.993747;DP=4350;DP4=2173,1882,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=1.54926e-06;MQSB=0.439474;RPB=0.999723;SGB=44.6462;VDB=0.137522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V13L|457|LOC_Os04g33280|protein_coding|CODING|LOC_Os04g33280.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V13L|457|LOC_Os04g33280|protein_coding|CODING|LOC_Os04g33280.2|1|1) FN2300.SNP.4:20133521 chr04:020133521 0 W/20133521-20133521 FN2300 SNP A -> G AC=1;AN=192;BQB=0.359485;DP=5375;DP4=2506,2572,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.60415e-14;MQSB=0.989601;RPB=0.562518;SGB=71.8591;VDB=0.732789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.4:20146553 chr04:020146553 0 W/20146553-20146553 FN1575-S Single Base Substitution G-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN1737-S.SNP.4:20146712 chr04:020146712 0 W/20146712-20146712 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.73868;DP=1851;DP4=1162,661,14,2;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000540249;MQB=2.83706e-05;MQSB=0.161524;RPB=0.983903;SGB=46.6141;VDB=0.398125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.4:20147026 chr04:020147026 0 W/20147026-20147026 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.99797;DP=2677;DP4=1308,1250,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0;MQB=1.30277e-05;MQSB=0.0087671;RPB=0.999992;SGB=44.2207;VDB=0.701275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.4:20148962 chr04:020148962 0 W/20148962-20148962 FN1117-S Single Base Substitution C-G INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1042-S.SNP.4:20150305 chr04:020150305 0 W/20150305-20150305 FN1042-S Single Base Substitution C-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN448-S.SNP.4:20154698 chr04:020154698 0 W/20154698-20154698 FN448-S Single Base Substitution C-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3552-S.SNP.4:20155780 chr04:020155780 0 W/20155780-20155780 FN3552-S SNP T -> G AC=1;AN=188;BQB=0.388308;DP=2676;DP4=1211,1394,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.51803e-05;MQSB=0.946347;RPB=0.442461;SGB=21.8113;VDB=0.132404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.4:20162424 chr04:020162424 0 W/20162424-20162424 FN2662-S SNP C -> T AC=2;AN=200;BQB=0.993071;DP=4679;DP4=2173,2234,16,26;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=4.49124e-19;MQSB=0.000149352;RPB=0.856951;SGB=94.6142;VDB=0.940951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.4:20162424 chr04:020162424 0 W/20162424-20162424 FN4069-S SNP C -> T AC=2;AN=182;BQB=0.961212;DP=2964;DP4=1247,1564,25,53;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=6.94169e-33;MQSB=2.2119e-08;RPB=0.475501;SGB=274.841;VDB=0.603464;EFF=INTERGENIC(MODIFIER||||||||||1) FN4084-S.SNP.4:20167161 chr04:020167161 0 W/20167161-20167161 FN4084-S SNP G -> A AC=1;AN=182;BQB=0.978325;DP=2676;DP4=1189,1422,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.00264586;MQSB=0.00588224;RPB=0.187758;SGB=62.1548;VDB=0.0690071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.4:20171411 chr04:020171411 0 W/20171411-20171411 FN3917-S SNP T -> A AC=1;AN=158;BQB=0.978743;DP=2477;DP4=1176,1230,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.12942e-05;MQSB=0.192059;RPB=0.539056;SGB=29.5899;VDB=0.0907041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.4:20174047 chr04:020174047 0 W/20174047-20174047 FN2494 SNP A -> G AC=1;AN=200;BQB=0.368427;DP=4935;DP4=2424,2167,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.2197e-16;MQSB=0.0746894;RPB=0.152338;SGB=65.9573;VDB=0.27549;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.4:20175754 chr04:020175754 0 W/20175754-20175754 FN751-S Single Base Substitution T-G INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. W246-5-1.SNP.4:20178665 chr04:020178665 0 W/20178665-20178665 W246-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN793-S.SNP.4:20180673 chr04:020180673 0 W/20180673-20180673 FN793-S Single Base Substitution C-G INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2568-S.SNP.4:20182424 chr04:020182424 0 W/20182424-20182424 FN2568-S SNP G -> A AC=2;AN=198;BQB=0.988404;DP=3642;DP4=2153,1305,9,13;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0.00137287;MQB=1.7449e-08;MQSB=8.16904e-19;RPB=0.856321;SGB=68.91;VDB=0.586266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.4:20182792 chr04:020182792 0 W/20182792-20182792 FN1268-S Single Base Substitution A-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2782-S.SNP.4:20195814 chr04:020195814 0 W/20195814-20195814 FN2782-S SNP G -> T AC=1;AN=198;BQB=0.941358;DP=3586;DP4=1767,1564,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.6897e-14;MQSB=0.866443;RPB=0.649266;SGB=100.095;VDB=0.540959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G88C|185|LOC_Os04g33350|protein_coding|CODING|LOC_Os04g33350.1|1|1) FN2108-S.SNP.4:20202496 chr04:020202496 0 W/20202496-20202496 FN2108-S SNP A -> T AC=1;AN=168;BQB=0.0266965;DP=3981;DP4=1885,2053,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.00229209;MQSB=0.008995;RPB=0.873869;SGB=-14.5109;VDB=0.95561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.4:20203451 chr04:020203451 0 W/20203451-20203451 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.44649;DP=4150;DP4=1937,1945,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.21786e-11;MQSB=0.437819;RPB=0.329487;SGB=77.1196;VDB=0.475741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.4:20220804 chr04:020220804 0 W/20220804-20220804 FN1573-S Single Base Substitution C-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3357-S.SNP.4:20223361 chr04:020223361 0 W/20223361-20223361 FN3357-S SNP T -> A AC=1;AN=184;BQB=0.944055;DP=3661;DP4=2033,1384,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=6.79266e-07;MQSB=0.907313;RPB=0.994909;SGB=53.3568;VDB=0.398319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.4:20224769 chr04:020224769 0 W/20224769-20224769 FN1368-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1220-S.SNP.4:20231133 chr04:020231133 0 W/20231133-20231133 FN1220-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-287.SNP.4:20231394 chr04:020231394 0 W/20231394-20231394 FN-287 Single Base Substitution T-C INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2137-S.SNP.4:20231960 chr04:020231960 0 W/20231960-20231960 FN2137-S SNP A -> T AC=1;AN=168;BQB=0.111147;DP=3344;DP4=1426,1895,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.11435e-05;MQSB=0.852852;RPB=0.860926;SGB=-35.5206;VDB=0.812925;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.4:20233497 chr04:020233497 0 W/20233497-20233497 FN956-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2758-S.SNP.4:20237710 chr04:020237710 0 W/20237710-20237710 FN2758-S SNP C -> A AC=1;AN=200;BQB=0.336929;DP=4859;DP4=2209,2277,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87768e-05;MQSB=0.798867;RPB=0.591224;SGB=19.0642;VDB=0.904961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E139D|461|LOC_Os04g33400|protein_coding|CODING|LOC_Os04g33400.1|1|1) FN4175-S.SNP.4:20244997 chr04:020244997 0 W/20244997-20244997 FN4175-S SNP T -> A AC=1;AN=170;BQB=0.878773;DP=2492;DP4=1186,1102,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.68645e-08;MQSB=0.940591;RPB=0.655812;SGB=56.7575;VDB=0.629076;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.4:20255499 chr04:020255499 0 W/20255499-20255499 W276-2-1 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2692-S.SNP.4:20266309 chr04:020266309 0 W/20266309-20266309 FN2692-S SNP G -> T AC=1;AN=200;BQB=0.65636;DP=5141;DP4=2408,2246,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44665e-12;MQSB=0.947689;RPB=0.977247;SGB=25.5416;VDB=0.507737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.4:20270225 chr04:020270225 0 W/20270225-20270225 FN1505-S Single Base Substitution G-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1561-S.SNP.4:20270409 chr04:020270409 0 W/20270409-20270409 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2781-S.SNP.4:20277944 chr04:020277944 0 W/20277944-20277944 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.973485;DP=4097;DP4=1908,1972,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.3629e-06;MQSB=0.961761;RPB=0.99536;SGB=35.7638;VDB=0.530978;EFF=INTRON(MODIFIER||||179|LOC_Os04g33510|protein_coding|CODING|LOC_Os04g33510.1|5|1),INTRON(MODIFIER||||179|LOC_Os04g33510|protein_coding|CODING|LOC_Os04g33510.2|5|1) FN-216.SNP.4:20282248 chr04:020282248 0 W/20282248-20282248 FN-216 Single Base Substitution T-C INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2545-S.SNP.4:20283628 chr04:020283628 0 W/20283628-20283628 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.994495;DP=4687;DP4=1991,2495,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.37731e-10;MQSB=0.979548;RPB=0.93541;SGB=31.9395;VDB=0.394181;EFF=UTR_3_PRIME(MODIFIER||112||452|LOC_Os04g33530|protein_coding|CODING|LOC_Os04g33530.1|4|1) FN620-S.SNP.4:20291590 chr04:020291590 0 W/20291590-20291590 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN786-S.SNP.4:20299021 chr04:020299021 0 W/20299021-20299021 FN786-S Single Base Substitution A-T INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN1450-S.SNP.4:20299760 chr04:020299760 0 W/20299760-20299760 FN1450-S Single Base Substitution C-T INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1440-S.SNP.4:20301222 chr04:020301222 0 W/20301222-20301222 FN1440-S Single Base Substitution T-C INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN1711-S.SNP.4:20307467 chr04:020307467 0 W/20307467-20307467 FN1711-S SNP T -> A AC=1;AN=188;BQB=0.0334034;DP=3885;DP4=1753,2101,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.3107e-08;MQSB=0.999079;RPB=0.951207;SGB=-64.8159;VDB=0.92157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.4:20317873 chr04:020317873 0 W/20317873-20317873 FN3820-S SNP G -> A AC=1;AN=190;BQB=0.15636;DP=2524;DP4=1154,1212,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00956105;MQSB=0.960761;RPB=0.322587;SGB=10.8904;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.4:20318650 chr04:020318650 0 W/20318650-20318650 FN2448 SNP T -> C AC=1;AN=200;BQB=0.99114;DP=4858;DP4=2130,2469,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85081e-10;MQSB=0.96689;RPB=0.769879;SGB=77.2904;VDB=0.075863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-109.SNP.4:20319840 chr04:020319840 0 W/20319840-20319840 FN-109 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN1448-S.SNP.4:20320235 chr04:020320235 0 W/20320235-20320235 FN1448-S Single Base Substitution G-T INTRON HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-33.SNP.4:20323220 chr04:020323220 0 W/20323220-20323220 FN-33 Single Base Substitution G-A INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN-327.SNP.4:20323978 chr04:020323978 0 W/20323978-20323978 FN-327 Single Base Substitution C-T INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN337-S.SNP.4:20323978 chr04:020323978 0 W/20323978-20323978 FN337-S Single Base Substitution C-T INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN2094-S.SNP.4:20327005 chr04:020327005 0 W/20327005-20327005 FN2094-S SNP T -> G AC=1;AN=168;BQB=0.0101338;DP=3224;DP4=1491,1696,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.11072e-06;MQSB=0.911936;RPB=0.284587;SGB=-14.0801;VDB=0.483639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.4:20334197 chr04:020334197 0 W/20334197-20334197 FN1314-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN2450.SNP.4:20350571 chr04:020350571 0 W/20350571-20350571 FN2450 SNP G -> A AC=1;AN=200;BQB=0.782366;DP=4998;DP4=2375,2357,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.10868e-11;MQSB=0.898564;RPB=0.981852;SGB=-12.5051;VDB=0.524654;EFF=INTRON(MODIFIER||||362|LOC_Os04g33600|protein_coding|CODING|LOC_Os04g33600.1|1|1) FN2546-S.SNP.4:20353520 chr04:020353520 0 W/20353520-20353520 FN2546-S SNP A -> G AC=2;AN=198;BQB=0.738844;DP=4134;DP4=1901,1879,14,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.92783e-13;MQSB=0.647733;RPB=0.896857;SGB=-9.07482;VDB=0.706361;EFF=UTR_3_PRIME(MODIFIER||370||362|LOC_Os04g33600|protein_coding|CODING|LOC_Os04g33600.1|5|1) FN420-S.SNP.4:20355714 chr04:020355714 0 W/20355714-20355714 FN420-S Single Base Substitution G-A INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN820-S.SNP.4:20356220 chr04:020356220 0 W/20356220-20356220 FN820-S Single Base Substitution T-A INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN2329.SNP.4:20358341 chr04:020358341 0 W/20358341-20358341 FN2329 SNP C -> A AC=1;AN=192;BQB=0.50433;DP=4766;DP4=2394,2078,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.79596e-11;MQSB=0.718518;RPB=0.9267;SGB=36.607;VDB=0.025915;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.4:20363197 chr04:020363197 0 W/20363197-20363197 FN868-S Single Base Substitution C-T INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2791-S.SNP.4:20364495 chr04:020364495 0 W/20364495-20364495 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.729827;DP=3588;DP4=1781,1609,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.47217e-09;MQSB=0.998882;RPB=0.986929;SGB=-10.2651;VDB=0.850737;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L75|182|LOC_Os04g33620|protein_coding|CODING|LOC_Os04g33620.1|2|1) FN1712-S.SNP.4:20366406 chr04:020366406 0 W/20366406-20366406 FN1712-S SNP A -> T AC=1;AN=188;BQB=0.00903445;DP=3866;DP4=2178,1628,16,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57434e-11;MQSB=0.932857;RPB=0.581179;SGB=-197.91;VDB=0.0251901;EFF=INTRON(MODIFIER||||152|LOC_Os04g33630|protein_coding|CODING|LOC_Os04g33630.1|1|1) FN836-S.SNP.4:20370104 chr04:020370104 0 W/20370104-20370104 FN836-S Single Base Substitution G-A INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2244-S.SNP.4:20370198 chr04:020370198 0 W/20370198-20370198 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.214423;DP=4650;DP4=2075,2238,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.79381e-14;MQSB=0.925916;RPB=0.232826;SGB=49.1985;VDB=0.234648;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.4:20376166 chr04:020376166 0 W/20376166-20376166 FN739-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g33640 glycosyl hydrolases family 17, putative, expressed SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1460-S.SNP.4:20376648 chr04:020376648 0 W/20376648-20376648 FN1460-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os04g33640 glycosyl hydrolases family 17, putative, expressed SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2539-S.SNP.4:20378566 chr04:020378566 0 W/20378566-20378566 FN2539-S SNP C -> T AC=1;AN=198;BQB=0.793626;DP=3950;DP4=1894,1825,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.57581e-13;MQSB=0.987623;RPB=0.831463;SGB=22.1104;VDB=0.436415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.4:20381031 chr04:020381031 0 W/20381031-20381031 FN2462 SNP G -> A AC=1;AN=200;BQB=0.0266602;DP=3680;DP4=1259,2159,6,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.80117e-11;MQSB=0.522897;RPB=0.875164;SGB=23.9365;VDB=0.552284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R41H|158|LOC_Os04g33650|protein_coding|CODING|LOC_Os04g33650.1|1|1) FN3440-S.SNP.4:20382711 chr04:020382711 0 W/20382711-20382711 FN3440-S SNP G -> A AC=1;AN=184;BQB=0.997481;DP=3351;DP4=1498,1723,11,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.97537e-15;MQSB=0.687682;RPB=0.991857;SGB=88.5747;VDB=0.603275;EFF=INTRON(MODIFIER||||158|LOC_Os04g33650|protein_coding|CODING|LOC_Os04g33650.1|1|1) FN-341.SNP.4:20383850 chr04:020383850 0 W/20383850-20383850 FN-341 Single Base Substitution C-A INTRON HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2620-S.SNP.4:20389684 chr04:020389684 0 W/20389684-20389684 FN2620-S SNP G -> T AC=2;AN=198;BQB=0.155096;DP=3990;DP4=1945,1827,26,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.5217e-25;MQSB=0.725663;RPB=0.450001;SGB=58.7981;VDB=0.92802;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G270|278|LOC_Os04g33660|protein_coding|CODING|LOC_Os04g33660.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G270|278|LOC_Os04g33660|protein_coding|CODING|LOC_Os04g33660.2|8|1) FN3863-S.SNP.4:20394938 chr04:020394938 0 W/20394938-20394938 FN3863-S SNP G -> A AC=1;AN=158;BQB=0.933118;DP=2490;DP4=1106,1285,4,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000298427;MQSB=0.997776;RPB=0.909147;SGB=20.8534;VDB=0.320361;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V407|448|LOC_Os04g33680|protein_coding|CODING|LOC_Os04g33680.1|1|1) FN3462-S.SNP.4:20396336 chr04:020396336 0 W/20396336-20396336 FN3462-S SNP G -> T AC=1;AN=184;BQB=0.880805;DP=2597;DP4=1279,1241,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00038506;MQB=0.000473425;MQSB=0.160528;RPB=0.418272;SGB=30.6558;VDB=0.0330611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.4:20400553 chr04:020400553 0 W/20400553-20400553 FN3309-S SNP T -> G AC=1;AN=184;BQB=0.710714;DP=2464;DP4=1108,1293,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.66156e-05;MQSB=0.988673;RPB=0.996334;SGB=28.7043;VDB=0.469204;EFF=INTRON(MODIFIER||||739|LOC_Os04g33690|protein_coding|CODING|LOC_Os04g33690.1|7|1) FN443-S.SNP.4:20405083 chr04:020405083 0 W/20405083-20405083 FN443-S Single Base Substitution T-A INTRON HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3415-S.SNP.4:20405728 chr04:020405728 0 W/20405728-20405728 FN3415-S SNP G -> T AC=2;AN=184;BQB=0.89187;DP=2958;DP4=1384,1454,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.78058e-15;MQSB=0.907942;RPB=0.946925;SGB=88.5747;VDB=0.0529336;EFF=UTR_3_PRIME(MODIFIER||340||739|LOC_Os04g33690|protein_coding|CODING|LOC_Os04g33690.1|14|1) FN2188-S.SNP.4:20407604 chr04:020407604 0 W/20407604-20407604 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.155621;DP=4910;DP4=2359,2225,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.78222e-13;MQSB=0.72783;RPB=0.99799;SGB=59.414;VDB=0.930538;EFF=INTRON(MODIFIER||||682|LOC_Os04g33700|protein_coding|CODING|LOC_Os04g33700.1|5|1) FN1762-S.SNP.4:20410426 chr04:020410426 0 W/20410426-20410426 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.231663;DP=2787;DP4=2032,727,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00224154;MQSB=0.974429;RPB=0.675817;SGB=28.8977;VDB=0.858427;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.4:20418545 chr04:020418545 0 W/20418545-20418545 FN267-S Single Base Substitution T-C INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN1029-S.SNP.4:20418554 chr04:020418554 0 W/20418554-20418554 FN1029-S Single Base Substitution C-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN971-S.SNP.4:20419370 chr04:020419370 0 W/20419370-20419370 FN971-S Single Base Substitution C-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2157-S.SNP.4:20421661 chr04:020421661 0 W/20421661-20421661 FN2157-S SNP A -> G AC=2;AN=168;BQB=0.350335;DP=2645;DP4=1041,1570,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.36737e-13;MQSB=0.948778;RPB=0.932387;SGB=22.7913;VDB=0.787729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.4:20427030 chr04:020427030 0 W/20427030-20427030 FN1011-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3627-S.SNP.4:20429509 chr04:020429509 0 W/20429509-20429509 FN3627-S SNP G -> C AC=1;AN=190;BQB=0.988574;DP=2978;DP4=1551,1310,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.18504e-10;MQSB=0.926213;RPB=0.680682;SGB=60.9777;VDB=0.911289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.4:20434368 chr04:020434368 0 W/20434368-20434368 FN1571-S Single Base Substitution C-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1571-S.SNP.4:20434369 chr04:020434369 0 W/20434369-20434369 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1571-S.SNP.4:20434373 chr04:020434373 0 W/20434373-20434373 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1123-S.SNP.4:20434579 chr04:020434579 0 W/20434579-20434579 FN1123-S Single Base Substitution C-T INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1123-S.SNP.4:20434582 chr04:020434582 0 W/20434582-20434582 FN1123-S Single Base Substitution G-A INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1117-S.SNP.4:20449029 chr04:020449029 0 W/20449029-20449029 FN1117-S Single Base Substitution A-G INTRON HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN960-S.SNP.4:20454335 chr04:020454335 0 W/20454335-20454335 FN960-S Single Base Substitution C-T INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN-333.SNP.4:20460841 chr04:020460841 0 W/20460841-20460841 FN-333 Single Base Substitution A-T INTRON HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN3690-S.SNP.4:20462121 chr04:020462121 0 W/20462121-20462121 FN3690-S SNP A -> C AC=2;AN=190;BQB=0.90952;DP=3027;DP4=1272,1591,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.6235e-15;MQSB=0.754359;RPB=0.575508;SGB=126.511;VDB=0.431859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q405H|550|LOC_Os04g33780|protein_coding|CODING|LOC_Os04g33780.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q168H|313|LOC_Os04g33780|protein_coding|CODING|LOC_Os04g33780.2|6|1) FN3339-S.SNP.4:20481244 chr04:020481244 0 W/20481244-20481244 FN3339-S SNP G -> A AC=2;AN=184;BQB=0.263562;DP=3004;DP4=1278,1547,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.43582e-09;MQSB=0.995845;RPB=0.357716;SGB=-38.6214;VDB=0.0348152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.4:20490112 chr04:020490112 0 W/20490112-20490112 FN2421 SNP G -> A AC=1;AN=200;BQB=0.0367219;DP=3562;DP4=1488,1654,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47444e-07;MQSB=0.884956;RPB=0.885497;SGB=9.48993;VDB=0.755148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.4:20493789 chr04:020493789 0 W/20493789-20493789 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.746417;DP=4696;DP4=2778,1680,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25798e-09;MQSB=0.779996;RPB=0.950111;SGB=68.0801;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.4:20495884 chr04:020495884 0 W/20495884-20495884 FN2754-S SNP C -> A AC=2;AN=200;BQB=0.410919;DP=4549;DP4=2181,2148,20,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.79436e-19;MQSB=0.579496;RPB=0.652691;SGB=68.5625;VDB=0.412708;EFF=INTERGENIC(MODIFIER||||||||||1) FN-72.SNP.4:20498695 chr04:020498695 0 W/20498695-20498695 FN-72 Single Base Substitution T-C INTERGENIC HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1641-S.SNP.4:20506237 chr04:020506237 0 W/20506237-20506237 FN1641-S Single Base Substitution C-T INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2445.SNP.4:20512183 chr04:020512183 0 W/20512183-20512183 FN2445 SNP A -> G AC=2;AN=200;BQB=0.457479;DP=5163;DP4=2426,2393,17,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.87486e-24;MQSB=0.844983;RPB=0.9841;SGB=107.64;VDB=0.684082;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.4:20528035 chr04:020528035 0 W/20528035-20528035 FN-214 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1721-S.SNP.4:20528984 chr04:020528984 0 W/20528984-20528984 FN1721-S SNP T -> C AC=1;AN=188;BQB=0.0603863;DP=1552;DP4=673,810,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.997396;MQSB=0.350714;RPB=0.227168;SGB=-34.1676;VDB=0.173624;EFF=UTR_3_PRIME(MODIFIER||192||232|LOC_Os04g33885|protein_coding|CODING|LOC_Os04g33885.1|1|1) FN402-S.SNP.4:20536970 chr04:020536970 0 W/20536970-20536970 FN402-S Single Base Substitution T-C INTRON HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN402-S.SNP.4:20536973 chr04:020536973 0 W/20536973-20536973 FN402-S Single Base Substitution G-A INTRON HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN1056-S.SNP.4:20539640 chr04:020539640 0 W/20539640-20539640 FN1056-S Single Base Substitution C-T INTERGENIC HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3341-S.SNP.4:20545409 chr04:020545409 0 W/20545409-20545409 FN3341-S SNP A -> T AC=1;AN=184;BQB=0.894993;DP=2828;DP4=1192,1448,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.49876e-09;MQSB=0.998595;RPB=0.906537;SGB=53.3568;VDB=0.0830043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.4:20556108 chr04:020556108 0 W/20556108-20556108 FN1240-S Single Base Substitution G-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN751-S.SNP.4:20570938 chr04:020570938 0 W/20570938-20570938 FN751-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g33980 transposon protein, putative, Mutator sub-class, expressed SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN990-S.SNP.4:20571478 chr04:020571478 0 W/20571478-20571478 FN990-S Single Base Substitution G-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2235-S.SNP.4:20573824 chr04:020573824 0 W/20573824-20573824 FN2235-S SNP A -> G AC=1;AN=190;BQB=0.707943;DP=4991;DP4=2251,2443,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.67492e-14;MQSB=0.854355;RPB=0.852772;SGB=103.742;VDB=0.185719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.4:20577443 chr04:020577443 0 W/20577443-20577443 FN3796-S SNP A -> T AC=2;AN=190;BQB=0.161402;DP=1985;DP4=987,905,9,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.60184e-06;MQSB=0.998286;RPB=0.627712;SGB=21.1058;VDB=0.392815;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.4:20585648 chr04:020585648 0 W/20585648-20585648 FN467-S Single Base Substitution T-C INTERGENIC HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN276-S.SNP.4:20599982 chr04:020599982 0 W/20599982-20599982 FN276-S Single Base Substitution T-C INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3545-S.SNP.4:20608446 chr04:020608446 0 W/20608446-20608446 FN3545-S SNP G -> A AC=1;AN=188;BQB=0.991765;DP=3056;DP4=1658,1269,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.28551e-08;MQSB=0.919892;RPB=0.690514;SGB=43.0708;VDB=0.51905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.4:20613479 chr04:020613479 0 W/20613479-20613479 FN2456 SNP T -> C AC=2;AN=200;BQB=0.86722;DP=3683;DP4=1973,1466,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.44689e-15;MQSB=0.986496;RPB=0.464384;SGB=68.5625;VDB=0.324175;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.4:20621218 chr04:020621218 0 W/20621218-20621218 FN547-S Single Base Substitution A-T INTRON HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2650-S.SNP.4:20623312 chr04:020623312 0 W/20623312-20623312 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.954236;DP=4625;DP4=2037,2248,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.47156e-12;MQSB=0.975699;RPB=0.0348092;SGB=65.5058;VDB=0.361858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2420.SNP.4:20626757 chr04:020626757 0 W/20626757-20626757 FN2420 SNP G -> T AC=2;AN=200;BQB=0.158752;DP=4390;DP4=1728,2360,14,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.86604e-18;MQSB=0.00355784;RPB=0.507185;SGB=46.4088;VDB=0.606369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.4:20628290 chr04:020628290 0 W/20628290-20628290 FN1684-S SNP G -> T AC=2;AN=188;BQB=0.979078;DP=2513;DP4=1765,700,18,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.19291e-11;MQSB=0.446826;RPB=0.991275;SGB=19.4279;VDB=0.0218946;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.4:20635271 chr04:020635271 0 W/20635271-20635271 FN_830-6-1 Single Base Substitution G-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2794-S.SNP.4:20639682 chr04:020639682 0 W/20639682-20639682 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.999926;DP=3880;DP4=1865,1829,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.56057e-07;MQSB=0.643577;RPB=0.540776;SGB=44.9538;VDB=0.223992;EFF=INTERGENIC(MODIFIER||||||||||1) FN-36.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN-36 Single Base Substitution G-T INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1374-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN1374-S Single Base Substitution G-T INTERGENIC Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2403.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN2403 SNP G -> T AC=1;AN=200;BQB=0.999474;DP=3952;DP4=2261,1485,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09693e-12;MQSB=0.984893;RPB=0.883305;SGB=-10.6896;VDB=0.73299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN3342-S SNP G -> T AC=2;AN=184;BQB=0.993393;DP=2242;DP4=1451,708,17,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.51047e-10;MQSB=0.974191;RPB=0.35052;SGB=84.9167;VDB=0.236641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN3420-S SNP G -> T AC=2;AN=184;BQB=0.995495;DP=2010;DP4=1308,633,8,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.64182e-09;MQSB=0.632069;RPB=0.975004;SGB=75.8731;VDB=0.0830043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN3520-S SNP G -> T AC=2;AN=188;BQB=0.554667;DP=2181;DP4=1370,729,15,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.27148e-11;MQSB=0.516736;RPB=0.87705;SGB=98.9552;VDB=0.62151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN3886-S SNP G -> T AC=1;AN=158;BQB=0.645938;DP=1863;DP4=1204,596,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000464911;MQSB=0.999284;RPB=0.917864;SGB=29.5899;VDB=0.648709;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN3970-S SNP G -> T AC=1;AN=168;BQB=0.756766;DP=2127;DP4=1390,639,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32289e-07;MQSB=0.709997;RPB=0.859284;SGB=55.3328;VDB=0.346082;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN470-S Single Base Substitution G-T INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN566-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN566-S Single Base Substitution G-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN935-S.SNP.4:20648675 chr04:020648675 0 W/20648675-20648675 FN935-S Single Base Substitution G-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN923-S.SNP.4:20655023 chr04:020655023 0 W/20655023-20655023 FN923-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g34100 expressed protein SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2661-S.SNP.4:20656550 chr04:020656550 0 W/20656550-20656550 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.510232;DP=5013;DP4=2299,2436,8,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.88874e-05;MQSB=0.25314;RPB=0.945926;SGB=49.6594;VDB=0.0294845;EFF=INTRON(MODIFIER||||231|LOC_Os04g34100|protein_coding|CODING|LOC_Os04g34100.1|3|1) FN3957-S.SNP.4:20657314 chr04:020657314 0 W/20657314-20657314 FN3957-S SNP C -> G AC=1;AN=168;BQB=0.389831;DP=2932;DP4=1295,1498,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=8.02167e-05;MQSB=0.0125246;RPB=0.560375;SGB=56.6036;VDB=0.0883424;EFF=INTERGENIC(MODIFIER||||||||||1) FN317-S.SNP.4:20660800 chr04:020660800 0 W/20660800-20660800 FN317-S Single Base Substitution A-G INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN317-S.SNP.4:20660802 chr04:020660802 0 W/20660802-20660802 FN317-S Single Base Substitution A-T INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3993-S.SNP.4:20668031 chr04:020668031 0 W/20668031-20668031 FN3993-S SNP G -> T AC=1;AN=168;BQB=0.716502;DP=2582;DP4=1396,1071,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.0118257;MQSB=0.671809;RPB=0.864396;SGB=38.8805;VDB=0.429586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.4:20685743 chr04:020685743 0 W/20685743-20685743 FN2791-S SNP C -> G AC=1;AN=198;BQB=0.676591;DP=4715;DP4=2312,2140,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.47666e-07;MQSB=0.608922;RPB=0.884395;SGB=18.9639;VDB=0.164222;EFF=INTERGENIC(MODIFIER||||||||||1) FN585-S.SNP.4:20690399 chr04:020690399 0 W/20690399-20690399 FN585-S Single Base Substitution C-A INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN3530-S.SNP.4:20697244 chr04:020697244 0 W/20697244-20697244 FN3530-S SNP T -> C AC=1;AN=188;BQB=0.991047;DP=2905;DP4=1344,1465,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.67376e-08;MQSB=0.894352;RPB=0.983319;SGB=2.45162;VDB=0.929263;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.4:20705393 chr04:020705393 0 W/20705393-20705393 FN3390-S SNP T -> C AC=1;AN=184;BQB=0.986656;DP=2818;DP4=1338,1312,12,2;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.00151468;MQSB=0.967521;RPB=0.710749;SGB=57.786;VDB=0.552277;EFF=INTERGENIC(MODIFIER||||||||||1) FN-359.SNP.4:20718702 chr04:020718702 0 W/20718702-20718702 FN-359 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g34190 retrotransposon protein, putative, unclassified, expressed SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1076-S.SNP.4:20735769 chr04:020735769 0 W/20735769-20735769 FN1076-S Single Base Substitution C-G INTRON HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2701-S.SNP.4:20745018 chr04:020745018 0 W/20745018-20745018 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.381173;DP=4767;DP4=2204,2315,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.98229e-07;MQSB=0.967291;RPB=0.375832;SGB=3.06925;VDB=0.453798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.4:20757941 chr04:020757941 0 W/20757941-20757941 FN2457 SNP A -> C AC=2;AN=200;BQB=0.940491;DP=4868;DP4=2053,2550,21,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.98909e-31;MQSB=0.999988;RPB=0.672434;SGB=224.656;VDB=0.680904;EFF=UTR_5_PRIME(MODIFIER||435||684|LOC_Os04g34270|protein_coding|CODING|LOC_Os04g34270.1|1|1) FN1058-S.SNP.4:20760125 chr04:020760125 0 W/20760125-20760125 FN1058-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g34270 serine/threonine-protein kinase receptor precursor, putative, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2395.SNP.4:20761813 chr04:020761813 0 W/20761813-20761813 FN2395 SNP G -> A AC=2;AN=200;BQB=0.99874;DP=4627;DP4=2294,2045,35,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000216123;MQB=7.14171e-35;MQSB=0.521645;RPB=0.472521;SGB=138.902;VDB=0.76696;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.4:20777926 chr04:020777926 0 W/20777926-20777926 FN501-S Single Base Substitution G-T INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2685-S.SNP.4:20778419 chr04:020778419 0 W/20778419-20778419 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.742397;DP=5185;DP4=2218,2680,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.5662e-06;MQSB=0.968536;RPB=0.400426;SGB=16.4591;VDB=0.737168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.4:20783912 chr04:020783912 0 W/20783912-20783912 FN2180-S SNP A -> G AC=2;AN=190;BQB=0.999996;DP=5307;DP4=2582,2235,25,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.58755e-26;MQSB=0.321783;RPB=0.0913535;SGB=167.594;VDB=0.00690052;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.4:20786979 chr04:020786979 0 W/20786979-20786979 FN1089-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g34320 S-domain receptor-like protein kinase, putative, expressed SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN512-S.SNP.4:20788602 chr04:020788602 0 W/20788602-20788602 FN512-S Single Base Substitution A-G INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN512-S.SNP.4:20788608 chr04:020788608 0 W/20788608-20788608 FN512-S Single Base Substitution T-G INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1022-S.SNP.4:20794452 chr04:020794452 0 W/20794452-20794452 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2662-S.SNP.4:20795081 chr04:020795081 0 W/20795081-20795081 FN2662-S SNP A -> G AC=2;AN=200;BQB=0.382869;DP=4885;DP4=2285,2284,28,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.43383e-31;MQSB=0.920607;RPB=0.999028;SGB=131.087;VDB=0.157398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.4:20797470 chr04:020797470 0 W/20797470-20797470 FN1239-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2688-S.SNP.4:20800338 chr04:020800338 0 W/20800338-20800338 FN2688-S SNP C -> G AC=2;AN=200;BQB=0.971148;DP=4216;DP4=2190,1746,6,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.24438e-07;MQSB=0.323924;RPB=0.998381;SGB=4.67442;VDB=0.836865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.4:20804406 chr04:020804406 0 W/20804406-20804406 FN2621-S SNP A -> G AC=1;AN=200;BQB=0.999943;DP=4552;DP4=2067,2228,9,22;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0162566;MQB=0.0466987;MQSB=0.00343699;RPB=0.9286;SGB=101.557;VDB=0.416749;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T463A|1462|LOC_Os04g34350|protein_coding|CODING|LOC_Os04g34350.1|1|1) FN-176.SNP.4:20812365 chr04:020812365 0 W/20812365-20812365 FN-176 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN3613-S.SNP.4:20820018 chr04:020820018 0 W/20820018-20820018 FN3613-S SNP T -> C AC=2;AN=190;BQB=0.951513;DP=2861;DP4=1346,1383,18,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1354e-25;MQSB=0.855546;RPB=0.110154;SGB=212.057;VDB=0.296903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S679P|805|LOC_Os04g34370|protein_coding|CODING|LOC_Os04g34370.1|1|1) FN2295.SNP.4:20823519 chr04:020823519 0 W/20823519-20823519 FN2295 SNP T -> A AC=2;AN=192;BQB=0.990876;DP=5070;DP4=2430,2377,24,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.35733e-31;MQSB=0.989069;RPB=0.867045;SGB=236.349;VDB=0.354428;EFF=INTRON(MODIFIER||||175|LOC_Os04g34380|protein_coding|CODING|LOC_Os04g34380.1|1|1) FN2218-S.SNP.4:20830707 chr04:020830707 0 W/20830707-20830707 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.909684;DP=3892;DP4=1825,1662,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.61383e-09;MQSB=0.847295;RPB=0.341876;SGB=7.21887;VDB=0.326204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.4:20832220 chr04:020832220 0 W/20832220-20832220 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.389938;DP=4848;DP4=2122,2472,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.17214e-13;MQSB=0.930282;RPB=0.999995;SGB=100.316;VDB=0.247467;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.4:20833081 chr04:020833081 0 W/20833081-20833081 FN872-S Single Base Substitution G-A INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-100.SNP.4:20833084 chr04:020833084 0 W/20833084-20833084 FN-100 Single Base Substitution C-A INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN2142-S.SNP.4:20833084 chr04:020833084 0 W/20833084-20833084 FN2142-S SNP C -> A AC=2;AN=168;BQB=0.0425577;DP=3734;DP4=1652,2018,22,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.25624e-17;MQSB=0.967629;RPB=0.279436;SGB=-190.732;VDB=0.184732;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.4:20833351 chr04:020833351 0 W/20833351-20833351 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.906215;DP=2540;DP4=1263,1184,19,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.14282e-17;MQSB=0.962646;RPB=0.324817;SGB=147.861;VDB=0.271485;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.4:20839093 chr04:020839093 0 W/20839093-20839093 FN-262 Single Base Substitution C-G INTERGENIC HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-287.SNP.4:20839093 chr04:020839093 0 W/20839093-20839093 FN-287 Single Base Substitution C-G INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN1279-S.SNP.4:20839093 chr04:020839093 0 W/20839093-20839093 FN1279-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN491-S.SNP.4:20839093 chr04:020839093 0 W/20839093-20839093 FN491-S Single Base Substitution C-G INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN_789-3-1.SNP.4:20839093 chr04:020839093 0 W/20839093-20839093 FN_789-3-1 Single Base Substitution C-G INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2229-S.SNP.4:20842292 chr04:020842292 0 W/20842292-20842292 FN2229-S SNP T -> G AC=2;AN=190;BQB=0.239959;DP=4456;DP4=2010,1913,28,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.60752e-32;MQSB=0.244954;RPB=0.973767;SGB=75.5894;VDB=0.335564;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.4:20842785 chr04:020842785 0 W/20842785-20842785 FN745-S Single Base Substitution A-T INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2477.SNP.4:20851775 chr04:020851775 0 W/20851775-20851775 FN2477 SNP T -> C AC=1;AN=200;BQB=0.767153;DP=4578;DP4=2231,1857,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.89415e-10;MQSB=0.207049;RPB=0.561804;SGB=61.9006;VDB=0.972054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.4:20860276 chr04:020860276 0 W/20860276-20860276 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.978079;DP=4947;DP4=2477,2195,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.03789e-06;MQSB=0.870796;RPB=0.239843;SGB=44.5415;VDB=0.0426332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.4:20873061 chr04:020873061 0 W/20873061-20873061 FN-256 Single Base Substitution G-A INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2691-S.SNP.4:20900321 chr04:020900321 0 W/20900321-20900321 FN2691-S SNP T -> C AC=1;AN=200;BQB=0.807051;DP=4343;DP4=2005,2118,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.19957e-12;MQSB=0.846846;RPB=0.28046;SGB=77.2904;VDB=0.799856;EFF=INTRON(MODIFIER||||215|LOC_Os04g34530|protein_coding|CODING|LOC_Os04g34530.2|2|1),INTRON(MODIFIER||||357|LOC_Os04g34530|protein_coding|CODING|LOC_Os04g34530.1|2|1) FN2268-S.SNP.4:20909123 chr04:020909123 0 W/20909123-20909123 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.534718;DP=4196;DP4=1703,2240,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.75732e-10;MQSB=0.98556;RPB=0.9373;SGB=67.3108;VDB=0.337602;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.4:20921635 chr04:020921635 0 W/20921635-20921635 FN-273 Single Base Substitution A-T INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN1707-S.SNP.4:20930398 chr04:020930398 0 W/20930398-20930398 FN1707-S SNP G -> A AC=2;AN=188;BQB=0.98218;DP=1763;DP4=1421,309,14,4;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0204197;MQB=0.0266595;MQSB=4.18053e-05;RPB=0.83861;SGB=8.62479;VDB=0.13206;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.4:20931608 chr04:020931608 0 W/20931608-20931608 FN-124 Single Base Substitution C-T INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2442.SNP.4:20940037 chr04:020940037 0 W/20940037-20940037 FN2442 SNP C -> A AC=1;AN=200;BQB=0.046719;DP=4485;DP4=2138,2043,12,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00735242;MQSB=0.00222868;RPB=0.133145;SGB=43.8747;VDB=0.244265;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.4:20951097 chr04:020951097 0 W/20951097-20951097 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.917674;DP=2690;DP4=1348,1263,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.46035e-07;MQSB=0.950269;RPB=0.94632;SGB=48.7425;VDB=0.208832;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L150|449|LOC_Os04g34620|protein_coding|CODING|LOC_Os04g34620.1|2|1) FN569-S.SNP.4:20951743 chr04:020951743 0 W/20951743-20951743 FN569-S Single Base Substitution C-T INTRON HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN2556-S.SNP.4:20955274 chr04:020955274 0 W/20955274-20955274 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.995223;DP=3864;DP4=1974,1721,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.78185e-11;MQSB=0.992928;RPB=0.585891;SGB=77.1196;VDB=0.637116;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T236|345|LOC_Os04g34630|protein_coding|CODING|LOC_Os04g34630.1|1|1) FN1030-S.SNP.4:20956769 chr04:020956769 0 W/20956769-20956769 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN566-S.SNP.4:20957121 chr04:020957121 0 W/20957121-20957121 FN566-S Single Base Substitution C-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3849-S.SNP.4:20972194 chr04:020972194 0 W/20972194-20972194 FN3849-S SNP A -> T AC=1;AN=158;BQB=0.978206;DP=2295;DP4=1043,1170,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.00305011;MQB=0.757871;MQSB=0.00229197;RPB=0.849483;SGB=42.6978;VDB=0.716396;EFF=INTRON(MODIFIER||||762|LOC_Os04g34670|protein_coding|CODING|LOC_Os04g34670.1|16|1) FN1094-S.SNP.4:20977411 chr04:020977411 0 W/20977411-20977411 FN1094-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g34680 retrotransposon protein, putative, unclassified, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3417-S.SNP.4:20977918 chr04:020977918 0 W/20977918-20977918 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.982222;DP=2582;DP4=1263,1253,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.33539e-07;MQSB=0.347421;RPB=0.77516;SGB=42.7914;VDB=0.593461;EFF=INTRON(MODIFIER||||357|LOC_Os04g34680|protein_coding|CODING|LOC_Os04g34680.1|1|1) FN2696-S.SNP.4:20980275 chr04:020980275 0 W/20980275-20980275 FN2696-S SNP T -> G AC=1;AN=200;BQB=0.898748;DP=5252;DP4=2432,2578,17,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000380807;MQB=2.06131e-13;MQSB=0.96069;RPB=0.975386;SGB=27.1468;VDB=0.447776;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.4:20988814 chr04:020988814 0 W/20988814-20988814 FN_829-2-5 Single Base Substitution T-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2301.SNP.4:20989058 chr04:020989058 0 W/20989058-20989058 FN2301 SNP T -> A AC=1;AN=192;BQB=0.961614;DP=4736;DP4=2253,2159,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0308277;MQB=0.127135;MQSB=0.00025995;RPB=0.944984;SGB=29.087;VDB=0.623847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.4:20997219 chr04:020997219 0 W/20997219-20997219 FN2397 SNP C -> G AC=1;AN=200;BQB=0.14455;DP=4349;DP4=2252,1817,9,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0213842;MQB=0.216949;MQSB=8.22719e-13;RPB=0.188168;SGB=-15.5309;VDB=0.100839;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.4:20999051 chr04:020999051 0 W/20999051-20999051 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.00337493;DP=3060;DP4=1362,1655,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0264706;MQB=0.0661267;MQSB=0.956197;RPB=0.587089;SGB=-155.491;VDB=0.337238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.4:21020543 chr04:021020543 0 W/21020543-21020543 FN2331 SNP G -> A AC=1;AN=192;BQB=0.685116;DP=3670;DP4=1257,2173,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.59565e-07;MQSB=0.75954;RPB=0.391503;SGB=31.4783;VDB=0.105808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.4:21027076 chr04:021027076 0 W/21027076-21027076 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.639963;DP=4853;DP4=2243,2350,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.98395e-13;MQSB=0.974632;RPB=0.875679;SGB=15.9106;VDB=0.98074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.4:21029768 chr04:021029768 0 W/21029768-21029768 FN3395-S SNP C -> T AC=1;AN=184;BQB=0.809185;DP=3001;DP4=1616,1296,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.94978e-05;MQSB=0.988199;RPB=0.443619;SGB=28.7043;VDB=0.880504;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.4:21031129 chr04:021031129 0 W/21031129-21031129 FN1409-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1355-S.SNP.4:21034841 chr04:021034841 0 W/21034841-21034841 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN618-S.SNP.4:21034841 chr04:021034841 0 W/21034841-21034841 FN618-S Single Base Substitution G-A INTERGENIC HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. W481-5-1.SNP.4:21035452 chr04:021035452 0 W/21035452-21035452 W481-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W481-5-1.SNP.4:21035466 chr04:021035466 0 W/21035466-21035466 W481-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3562-S.SNP.4:21037370 chr04:021037370 0 W/21037370-21037370 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.451779;DP=3115;DP4=1455,1603,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000321027;MQB=6.94007e-07;MQSB=0.996821;RPB=0.999483;SGB=39.5276;VDB=0.444984;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.4:21042815 chr04:021042815 0 W/21042815-21042815 FN-96 Single Base Substitution A-T INTRON HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN852-S.SNP.4:21046542 chr04:021046542 0 W/21046542-21046542 FN852-S Single Base Substitution C-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN1550-S.SNP.4:21049491 chr04:021049491 0 W/21049491-21049491 FN1550-S Single Base Substitution G-A INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1550-S.SNP.4:21049492 chr04:021049492 0 W/21049492-21049492 FN1550-S Single Base Substitution G-A INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1373-S.SNP.4:21050234 chr04:021050234 0 W/21050234-21050234 FN1373-S Single Base Substitution T-C INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1506-S.SNP.4:21055497 chr04:021055497 0 W/21055497-21055497 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN4271-S.SNP.4:21058187 chr04:021058187 0 W/21058187-21058187 FN4271-S SNP C -> T AC=1;AN=170;BQB=0.93452;DP=2426;DP4=1067,1258,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.1363e-05;MQSB=0.774801;RPB=0.952561;SGB=30.1021;VDB=0.340291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R148K|239|LOC_Os04g34760|protein_coding|CODING|LOC_Os04g34760.1|1|1) FN2285.SNP.4:21061491 chr04:021061491 0 W/21061491-21061491 FN2285 SNP T -> A AC=1;AN=192;BQB=0.987575;DP=4970;DP4=2352,2318,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.92167e-14;MQSB=0.214968;RPB=0.360359;SGB=99.4183;VDB=0.0172342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.4:21061492 chr04:021061492 0 W/21061492-21061492 FN2285 SNP A -> C AC=1;AN=192;BQB=0.693377;DP=4996;DP4=2373,2331,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.72715e-14;MQSB=0.253439;RPB=0.290119;SGB=94.8539;VDB=0.0221067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.4:21061820 chr04:021061820 0 W/21061820-21061820 FN2593-S SNP A -> T AC=1;AN=198;BQB=0.972044;DP=4436;DP4=1980,2169,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.28261e-13;MQSB=0.982909;RPB=0.278485;SGB=39.7248;VDB=0.284158;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.4:21062961 chr04:021062961 0 W/21062961-21062961 FN4011-S SNP A -> T AC=2;AN=168;BQB=0.916612;DP=2707;DP4=1234,1333,20,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.88025e-16;MQSB=0.974326;RPB=0.141269;SGB=136.358;VDB=0.618968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.4:21067445 chr04:021067445 0 W/21067445-21067445 FN1448-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3411-S.SNP.4:21069014 chr04:021069014 0 W/21069014-21069014 FN3411-S SNP T -> A AC=1;AN=184;BQB=0.487442;DP=2619;DP4=1122,1357,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09683e-14;MQSB=0.826613;RPB=0.999435;SGB=103.004;VDB=0.0778916;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.4:21072819 chr04:021072819 0 W/21072819-21072819 FN1040-S Single Base Substitution C-G INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN721-S.SNP.4:21075868 chr04:021075868 0 W/21075868-21075868 FN721-S Single Base Substitution C-T INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2481.SNP.4:21076141 chr04:021076141 0 W/21076141-21076141 FN2481 SNP G -> A AC=1;AN=200;BQB=0.779584;DP=4079;DP4=1906,1932,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19845e-05;MQSB=0.91681;RPB=0.90639;SGB=31.2392;VDB=0.612706;EFF=INTERGENIC(MODIFIER||||||||||1) 702-4.SNP.4:21081725 chr04:021081725 0 W/21081725-21081725 702-4 Single Base Substitution T-C INTERGENIC Homo SNo: 1445, Mutant_ID: 702-4, Generation: M2, Mutations: 27, Genes: 28, Seed availability: Yes. FN2252-S.SNP.4:21081921 chr04:021081921 0 W/21081921-21081921 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.999868;DP=3877;DP4=1768,1851,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000515863;MQB=2.11805e-07;MQSB=0.0966917;RPB=0.894673;SGB=49.0954;VDB=0.0649479;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.4:21085313 chr04:021085313 0 W/21085313-21085313 FN-95 Single Base Substitution T-A INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN585-S.SNP.4:21086097 chr04:021086097 0 W/21086097-21086097 FN585-S Single Base Substitution G-T INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1103-S.SNP.4:21091677 chr04:021091677 0 W/21091677-21091677 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2444.SNP.4:21095279 chr04:021095279 0 W/21095279-21095279 FN2444 SNP C -> T AC=2;AN=200;BQB=0.997978;DP=4501;DP4=2189,2024,29,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.96161e-30;MQSB=0.986419;RPB=0.997413;SGB=191.687;VDB=0.958232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.4:21101621 chr04:021101621 0 W/21101621-21101621 FN3657-S SNP C -> G AC=1;AN=190;BQB=0.950936;DP=2724;DP4=1299,1317,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0635095;MQB=0.407128;MQSB=7.00649e-44;RPB=0.765969;SGB=35.4339;VDB=0.0421576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.4:21109563 chr04:021109563 0 W/21109563-21109563 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.732666;DP=4540;DP4=2156,2130,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72358e-05;MQSB=0.977761;RPB=0.631765;SGB=25.849;VDB=0.112814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1482-S.SNP.4:21110359 chr04:021110359 0 W/21110359-21110359 FN1482-S Single Base Substitution T-G INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN367-S.SNP.4:21112415 chr04:021112415 0 W/21112415-21112415 FN367-S Single Base Substitution G-A INTERGENIC HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN918-S.SNP.4:21112415 chr04:021112415 0 W/21112415-21112415 FN918-S Single Base Substitution G-A INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2113-S.SNP.4:21116726 chr04:021116726 0 W/21116726-21116726 FN2113-S SNP A -> T AC=1;AN=168;BQB=0.071228;DP=4068;DP4=2004,1970,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.14424e-08;MQSB=0.844362;RPB=0.400335;SGB=7.05233;VDB=0.525684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.4:21117514 chr04:021117514 0 W/21117514-21117514 FN1702-S SNP G -> C AC=1;AN=188;BQB=4.05594e-06;DP=3808;DP4=1961,1798,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000555201;MQSB=0.892252;RPB=0.910986;SGB=-139.973;VDB=0.745165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.4:21123296 chr04:021123296 0 W/21123296-21123296 FN2444 SNP A -> C AC=1;AN=200;BQB=0.249105;DP=5071;DP4=2373,2460,10,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00512719;MQB=3.67343e-07;MQSB=0.0326702;RPB=0.396098;SGB=40.2696;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.4:21123705 chr04:021123705 0 W/21123705-21123705 FN1579-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g36550 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN3966-S.SNP.4:21126807 chr04:021126807 0 W/21126807-21126807 FN3966-S SNP G -> C AC=2;AN=168;BQB=0.865214;DP=2484;DP4=928,1421,18,18;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.00362319;MQB=3.85142e-06;MQSB=0.210015;RPB=0.397688;SGB=154.082;VDB=0.170339;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E1026Q|1045|LOC_Os04g34840|protein_coding|CODING|LOC_Os04g34840.1|3|1),UTR_3_PRIME(MODIFIER||409||819|LOC_Os04g36550|protein_coding|CODING|LOC_Os04g36550.1|2|1) FN2666-S.SNP.4:21127408 chr04:021127408 0 W/21127408-21127408 FN2666-S SNP T -> A AC=1;AN=200;BQB=0.994367;DP=3965;DP4=1411,1768,15,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000504414;MQB=3.10361e-09;MQSB=9.64742e-05;RPB=0.788597;SGB=90.7419;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.4:21130693 chr04:021130693 0 W/21130693-21130693 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.738157;DP=2208;DP4=955,1090,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.95536e-06;MQSB=0.847104;RPB=0.468624;SGB=-16.5381;VDB=0.506003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.4:21142937 chr04:021142937 0 W/21142937-21142937 FN3854-S SNP A -> G AC=1;AN=158;BQB=0.913039;DP=2392;DP4=1245,1061,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.61494e-09;MQSB=0.986664;RPB=0.641789;SGB=44.1818;VDB=0.0143369;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.4:21143987 chr04:021143987 0 W/21143987-21143987 FN590-S Single Base Substitution C-G INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1022-S.SNP.4:21149156 chr04:021149156 0 W/21149156-21149156 FN1022-S Single Base Substitution C-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2207-S.SNP.4:21152492 chr04:021152492 0 W/21152492-21152492 FN2207-S SNP A -> G AC=1;AN=190;BQB=0.999421;DP=4459;DP4=2172,1957,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0154743;MQB=0.837642;MQSB=0.0010413;RPB=0.74342;SGB=53.6492;VDB=0.325636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.4:21154433 chr04:021154433 0 W/21154433-21154433 FN2179-S SNP G -> A AC=1;AN=168;BQB=0.31643;DP=3524;DP4=1638,1845,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.0615778;MQB=0.630082;MQSB=0;RPB=0.978655;SGB=-16.2342;VDB=0.960592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.4:21155572 chr04:021155572 0 W/21155572-21155572 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.624103;DP=3902;DP4=2297,1362,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0048693;MQB=6.6585e-07;MQSB=2.25989e-07;RPB=0.391469;SGB=37.1297;VDB=0.788028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:21160364 chr04:021160364 0 W/21160364-21160364 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.981589;DP=2666;DP4=1091,1471,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.18415e-14;MQSB=0.955215;RPB=0.27258;SGB=48.9658;VDB=0.589682;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.4:21160619 chr04:021160619 0 W/21160619-21160619 FN358-S Single Base Substitution G-C INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-70.SNP.4:21163227 chr04:021163227 0 W/21163227-21163227 FN-70 Single Base Substitution C-T INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN809-S.SNP.4:21163249 chr04:021163249 0 W/21163249-21163249 FN809-S Single Base Substitution A-T INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN857-S.SNP.4:21165732 chr04:021165732 0 W/21165732-21165732 FN857-S Single Base Substitution C-T INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2696-S.SNP.4:21174321 chr04:021174321 0 W/21174321-21174321 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.189759;DP=3848;DP4=2033,1584,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000259875;MQB=4.1627e-08;MQSB=0.843803;RPB=0.692258;SGB=26.8797;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.4:21179947 chr04:021179947 0 W/21179947-21179947 FN4068-S SNP G -> A AC=1;AN=182;BQB=0.984369;DP=2994;DP4=1654,1285,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00300601;MQB=1.0358e-06;MQSB=0.12622;RPB=0.996293;SGB=44.1115;VDB=0.0467892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.4:21186906 chr04:021186906 0 W/21186906-21186906 FN2572-S Single Base Substitution G-C INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1711-S.SNP.4:21187441 chr04:021187441 0 W/21187441-21187441 FN1711-S SNP C -> T AC=1;AN=188;BQB=0.945681;DP=2471;DP4=1304,1144,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00849858;MQB=0.000269439;MQSB=0.00269823;RPB=0.687266;SGB=18.4463;VDB=0.598068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.4:21191509 chr04:021191509 0 W/21191509-21191509 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.750393;DP=2967;DP4=1354,1452,2,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.56689e-06;MQSB=0.196955;RPB=0.563176;SGB=39.6545;VDB=0.2043;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.4:21198085 chr04:021198085 0 W/21198085-21198085 FN517-S Single Base Substitution T-A INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2753-S.SNP.4:21204477 chr04:021204477 0 W/21204477-21204477 FN2753-S SNP C -> A AC=2;AN=200;BQB=0.97909;DP=3826;DP4=1442,1802,8,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=9.46772e-11;MQSB=0.000182569;RPB=0.999607;SGB=-109.649;VDB=0.365117;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.4:21204649 chr04:021204649 0 W/21204649-21204649 FN-102 Single Base Substitution C-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3591-S.SNP.4:21206241 chr04:021206241 0 W/21206241-21206241 FN3591-S SNP T -> A AC=2;AN=188;BQB=0.999927;DP=2987;DP4=1342,1500,17,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.9258e-23;MQSB=0.943991;RPB=0.994114;SGB=180.734;VDB=0.715216;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.4:21214069 chr04:021214069 0 W/21214069-21214069 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.874239;DP=2678;DP4=1365,1190,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.40217e-09;MQSB=0.765912;RPB=0.457783;SGB=56.6036;VDB=0.738512;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.4:21214071 chr04:021214071 0 W/21214071-21214071 FN4041-S SNP T -> A AC=1;AN=168;BQB=0.106965;DP=2681;DP4=1363,1194,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39245e-10;MQSB=0.806583;RPB=0.709556;SGB=24.6155;VDB=0.620972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.4:21215720 chr04:021215720 0 W/21215720-21215720 FN2241-S SNP A -> G AC=1;AN=190;BQB=0.52468;DP=3652;DP4=1357,1716,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000273513;MQSB=0.042466;RPB=0.459406;SGB=2.55724;VDB=0.291443;EFF=SYNONYMOUS_STOP(LOW|SILENT|tAa/tGa|*171|170|LOC_Os04g34910|protein_coding|CODING|LOC_Os04g34910.1|1|1) FN-409.SNP.4:21215831 chr04:021215831 0 W/21215831-21215831 FN-409 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN4038-S.SNP.4:21215831 chr04:021215831 0 W/21215831-21215831 FN4038-S SNP G -> A AC=2;AN=168;BQB=0.736996;DP=3280;DP4=1442,1627,27,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.77117e-21;MQSB=0.543305;RPB=0.115824;SGB=114.556;VDB=0.893054;EFF=UTR_3_PRIME(MODIFIER||110||170|LOC_Os04g34910|protein_coding|CODING|LOC_Os04g34910.1|1|1) FN409-S.SNP.4:21215831 chr04:021215831 0 W/21215831-21215831 FN409-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN493-S.SNP.4:21215831 chr04:021215831 0 W/21215831-21215831 FN493-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN924-S.SNP.4:21215831 chr04:021215831 0 W/21215831-21215831 FN924-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2230-S.SNP.4:21226311 chr04:021226311 0 W/21226311-21226311 FN2230-S SNP A -> C AC=1;AN=190;BQB=0.980998;DP=5122;DP4=2402,2424,15,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000195236;MQB=2.37974e-19;MQSB=0.990538;RPB=0.420698;SGB=110.732;VDB=0.10149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.4:21228483 chr04:021228483 0 W/21228483-21228483 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.659921;DP=2802;DP4=1259,1431,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.81889e-07;MQSB=0.990364;RPB=0.730492;SGB=15.7097;VDB=0.762846;EFF=INTRON(MODIFIER||||196|LOC_Os04g34930|protein_coding|CODING|LOC_Os04g34930.1|4|1),INTRON(MODIFIER||||156|LOC_Os04g34930|protein_coding|CODING|LOC_Os04g34930.3|2|1) FN3780-S.SNP.4:21239128 chr04:021239128 0 W/21239128-21239128 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.926718;DP=2775;DP4=1348,1342,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.46729e-07;MQSB=0.856763;RPB=0.823704;SGB=25.439;VDB=0.534486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G135E|185|LOC_Os04g34950|protein_coding|CODING|LOC_Os04g34950.1|3|1) FN-188.SNP.4:21241280 chr04:021241280 0 W/21241280-21241280 FN-188 Single Base Substitution G-T INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3678-S.SNP.4:21242732 chr04:021242732 0 W/21242732-21242732 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.971416;DP=2515;DP4=1353,1075,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.18632e-06;MQSB=0.672392;RPB=0.521339;SGB=39.9877;VDB=0.104744;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.4:21242800 chr04:021242800 0 W/21242800-21242800 FN916-S Single Base Substitution G-A INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN4041-S.SNP.4:21243317 chr04:021243317 0 W/21243317-21243317 FN4041-S SNP C -> T AC=1;AN=168;BQB=0.929464;DP=2634;DP4=1358,1207,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000165149;MQSB=0.137943;RPB=0.431147;SGB=43.3113;VDB=0.215687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1029M|1110|LOC_Os04g34960|protein_coding|CODING|LOC_Os04g34960.1|6|1) FN918-S.SNP.4:21244342 chr04:021244342 0 W/21244342-21244342 FN918-S Single Base Substitution A-T INTRON HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3285-S.SNP.4:21252119 chr04:021252119 0 W/21252119-21252119 FN3285-S SNP G -> A AC=2;AN=184;BQB=0.309592;DP=3221;DP4=1567,1467,24,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.59365e-12;MQSB=0.206512;RPB=0.92745;SGB=71.1891;VDB=0.875033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.4:21252877 chr04:021252877 0 W/21252877-21252877 FN1153-S Single Base Substitution G-T INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3997-S.SNP.4:21253430 chr04:021253430 0 W/21253430-21253430 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.989211;DP=2636;DP4=1355,1164,14,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.91161e-14;MQSB=0.762687;RPB=0.998744;SGB=118.635;VDB=0.206961;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.4:21256962 chr04:021256962 0 W/21256962-21256962 FN742-S Single Base Substitution T-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3535-S.SNP.4:21258675 chr04:021258675 0 W/21258675-21258675 FN3535-S SNP G -> C AC=1;AN=188;BQB=0.903666;DP=2875;DP4=1216,1613,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.59531e-09;MQSB=0.791561;RPB=0.876809;SGB=58.0655;VDB=0.66672;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L51F|513|LOC_Os04g34976|protein_coding|CODING|LOC_Os04g34976.2|2|1) FN1523-S.SNP.4:21264855 chr04:021264855 0 W/21264855-21264855 FN1523-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN3869-S.SNP.4:21268215 chr04:021268215 0 W/21268215-21268215 FN3869-S SNP T -> C AC=1;AN=158;BQB=0.704534;DP=2582;DP4=1311,1169,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.56088e-05;MQSB=0.957426;RPB=0.872897;SGB=14.3409;VDB=0.696154;EFF=UTR_3_PRIME(MODIFIER||544||381|LOC_Os04g34984|protein_coding|CODING|LOC_Os04g34984.2|10|1),UTR_3_PRIME(MODIFIER||285||538|LOC_Os04g34984|protein_coding|CODING|LOC_Os04g34984.1|11|1),INTRON(MODIFIER||||538|LOC_Os04g34984|protein_coding|CODING|LOC_Os04g34984.3|11|1) FN519-S.SNP.4:21309096 chr04:021309096 0 W/21309096-21309096 FN519-S Single Base Substitution T-C INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN461-S.SNP.4:21309406 chr04:021309406 0 W/21309406-21309406 FN461-S Single Base Substitution T-G INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN1031-S.SNP.4:21321545 chr04:021321545 0 W/21321545-21321545 FN1031-S Single Base Substitution A-G INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1258-S.SNP.4:21324818 chr04:021324818 0 W/21324818-21324818 FN1258-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1258-S.SNP.4:21324822 chr04:021324822 0 W/21324822-21324822 FN1258-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g35080 protein kinase domain containing protein, expressed SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1188-S.SNP.4:21340971 chr04:021340971 0 W/21340971-21340971 FN1188-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2092-S.SNP.4:21344976 chr04:021344976 0 W/21344976-21344976 FN2092-S SNP A -> T AC=2;AN=168;BQB=0.897608;DP=1814;DP4=906,787,7,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.73817e-10;MQSB=0.602676;RPB=0.31339;SGB=-12.3568;VDB=0.691995;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.4:21347049 chr04:021347049 0 W/21347049-21347049 FN4247-S SNP C -> T AC=1;AN=170;BQB=0.995005;DP=2419;DP4=1247,1101,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.63767e-07;MQSB=0.941944;RPB=0.879549;SGB=38.987;VDB=0.481017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.4:21350543 chr04:021350543 0 W/21350543-21350543 FN3722-S SNP G -> A AC=2;AN=190;BQB=0.716926;DP=2122;DP4=1159,859,25,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.48448e-17;MQSB=0.778242;RPB=0.98137;SGB=135.619;VDB=0.750241;EFF=INTRON(MODIFIER||||490|LOC_Os04g35130|protein_coding|CODING|LOC_Os04g35130.1|2|1) FN1442-S.SNP.4:21374216 chr04:021374216 0 W/21374216-21374216 FN1442-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g35170 expressed protein SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN-189.SNP.4:21381342 chr04:021381342 0 W/21381342-21381342 FN-189 Single Base Substitution T-C INTRON HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-316.SNP.4:21386815 chr04:021386815 0 W/21386815-21386815 FN-316 Single Base Substitution C-G INTRON HOMO SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1240-S.SNP.4:21386815 chr04:021386815 0 W/21386815-21386815 FN1240-S Single Base Substitution C-G INTRON HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3499-S.SNP.4:21386815 chr04:021386815 0 W/21386815-21386815 FN3499-S SNP C -> G AC=2;AN=188;BQB=0.715014;DP=2509;DP4=1249,1180,17,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.90122e-15;MQSB=0.793487;RPB=0.587079;SGB=85.5904;VDB=0.800864;EFF=INTRON(MODIFIER||||69|LOC_Os04g35200|protein_coding|CODING|LOC_Os04g35200.1|1|1) FN3939-S.SNP.4:21386815 chr04:021386815 0 W/21386815-21386815 FN3939-S SNP C -> G AC=2;AN=158;BQB=0.94766;DP=2253;DP4=1002,1169,6,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.12949e-08;MQSB=0.666866;RPB=0.395716;SGB=47.0672;VDB=0.714734;EFF=INTRON(MODIFIER||||69|LOC_Os04g35200|protein_coding|CODING|LOC_Os04g35200.1|1|1) FN2650-S.SNP.4:21387349 chr04:021387349 0 W/21387349-21387349 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.451837;DP=4531;DP4=2144,2103,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51467e-06;MQSB=0.753487;RPB=0.990977;SGB=24.2746;VDB=0.660271;EFF=UTR_5_PRIME(MODIFIER||8||69|LOC_Os04g35200|protein_coding|CODING|LOC_Os04g35200.1|1|1) FN4231-S.SNP.4:21389246 chr04:021389246 0 W/21389246-21389246 FN4231-S SNP C -> T AC=1;AN=170;BQB=0.759283;DP=2798;DP4=1363,1347,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000357398;MQB=1.08105e-08;MQSB=0.952387;RPB=0.584666;SGB=32.0972;VDB=0.82025;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.4:21394715 chr04:021394715 0 W/21394715-21394715 FN2247-S SNP A -> C AC=1;AN=190;BQB=0.589718;DP=4351;DP4=2253,1636,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000919329;MQB=3.35837e-07;MQSB=0.416312;RPB=0.986781;SGB=15.9981;VDB=0.13933;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.4:21400780 chr04:021400780 0 W/21400780-21400780 FN3362-S SNP G -> T AC=2;AN=184;BQB=0.886699;DP=3225;DP4=1639,1474,18,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18809e-21;MQSB=0.988907;RPB=0.189232;SGB=161.787;VDB=0.591542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C770F|893|LOC_Os04g35210|protein_coding|CODING|LOC_Os04g35210.1|4|1) FN550-S.SNP.4:21405423 chr04:021405423 0 W/21405423-21405423 FN550-S Single Base Substitution C-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN302-S.SNP.4:21406274 chr04:021406274 0 W/21406274-21406274 FN302-S Single Base Substitution C-T INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN4229-S.SNP.4:21407008 chr04:021407008 0 W/21407008-21407008 FN4229-S SNP T -> A AC=1;AN=170;BQB=0.937127;DP=2414;DP4=1045,1011,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=7.59092e-05;MQSB=0.449299;RPB=0.5603;SGB=25.6601;VDB=0.342554;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.4:21415473 chr04:021415473 0 W/21415473-21415473 FN438-S Single Base Substitution A-T INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN664-S.SNP.4:21415473 chr04:021415473 0 W/21415473-21415473 FN664-S Single Base Substitution A-T INTRON HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN4165-S.SNP.4:21420847 chr04:021420847 0 W/21420847-21420847 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.918932;DP=2571;DP4=1402,1086,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.75249e-10;MQSB=0.940105;RPB=0.828098;SGB=41.7633;VDB=0.509528;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.4:21424412 chr04:021424412 0 W/21424412-21424412 FN1652-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g35250 MONOCULM 1, putative, expressed SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN-193.SNP.4:21428954 chr04:021428954 0 W/21428954-21428954 FN-193 Single Base Substitution G-A INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1631-S.SNP.4:21430582 chr04:021430582 0 W/21430582-21430582 FN1631-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g35260 DEAD/DEAH box helicase domain containing protein, expressed SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2318.SNP.4:21432152 chr04:021432152 0 W/21432152-21432152 FN2318 SNP C -> T AC=1;AN=192;BQB=0.140716;DP=4871;DP4=2380,2234,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.59002e-16;MQSB=0.85282;RPB=0.86097;SGB=82.5522;VDB=0.550978;EFF=INTRON(MODIFIER||||1439|LOC_Os04g35260|protein_coding|CODING|LOC_Os04g35260.1|27|1) FN1356-S.SNP.4:21432993 chr04:021432993 0 W/21432993-21432993 FN1356-S Single Base Substitution T-A INTRON HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3050-S.SNP.4:21439017 chr04:021439017 0 W/21439017-21439017 FN3050-S SNP T -> C AC=1;AN=184;BQB=0.971249;DP=2509;DP4=1351,1058,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.80082e-07;MQSB=0.956815;RPB=0.763161;SGB=13.188;VDB=0.0398022;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P744|1439|LOC_Os04g35260|protein_coding|CODING|LOC_Os04g35260.1|15|1) FN-226.SNP.4:21456106 chr04:021456106 0 W/21456106-21456106 FN-226 Single Base Substitution G-A INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-226.SNP.4:21456107 chr04:021456107 0 W/21456107-21456107 FN-226 Single Base Substitution C-G INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-156.SNP.4:21460082 chr04:021460082 0 W/21460082-21460082 FN-156 Single Base Substitution A-G INTERGENIC HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN337-S.SNP.4:21470500 chr04:021470500 0 W/21470500-21470500 FN337-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g35305 tetratricopeptide-like helical, putative, expressed SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN679-S.SNP.4:21471422 chr04:021471422 0 W/21471422-21471422 FN679-S Single Base Substitution T-G INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2483.SNP.4:21472659 chr04:021472659 0 W/21472659-21472659 FN2483 SNP G -> A AC=1;AN=200;BQB=0.991634;DP=4430;DP4=2286,1806,13,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.0462e-08;MQSB=6.88672e-06;RPB=0.998253;SGB=100.316;VDB=0.364568;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.4:21472994 chr04:021472994 0 W/21472994-21472994 FN-83 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN956-S.SNP.4:21473595 chr04:021473595 0 W/21473595-21473595 FN956-S Single Base Substitution G-A INTRON HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN956-S.SNP.4:21473596 chr04:021473596 0 W/21473596-21473596 FN956-S Single Base Substitution G-C INTRON HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2269-S.SNP.4:21488426 chr04:021488426 0 W/21488426-21488426 FN2269-S SNP C -> G AC=1;AN=190;BQB=0.893434;DP=3495;DP4=1642,1631,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.0964235;MQB=0.715656;MQSB=0;RPB=0.962996;SGB=76.4186;VDB=0.0148393;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R453P|1882|LOC_Os04g35330|protein_coding|CODING|LOC_Os04g35330.1|2|1) FN3547-S.SNP.4:21507473 chr04:021507473 0 W/21507473-21507473 FN3547-S SNP G -> A AC=1;AN=186;BQB=0.96295;DP=2836;DP4=1132,1630,9,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.22786e-08;MQSB=0.909634;RPB=0.679979;SGB=43.0708;VDB=0.904306;EFF=INTRON(MODIFIER||||373|LOC_Os04g35370|protein_coding|CODING|LOC_Os04g35370.1|1|1) FN4144-S.SNP.4:21507473 chr04:021507473 0 W/21507473-21507473 FN4144-S SNP G -> A AC=1;AN=170;BQB=0.44906;DP=2589;DP4=1153,1368,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.48084e-06;MQSB=0.870116;RPB=0.751372;SGB=34.878;VDB=0.681619;EFF=INTRON(MODIFIER||||373|LOC_Os04g35370|protein_coding|CODING|LOC_Os04g35370.1|1|1) FN2137-S.SNP.4:21519124 chr04:021519124 0 W/21519124-21519124 FN2137-S SNP C -> T AC=2;AN=168;BQB=0.714198;DP=3972;DP4=1644,2259,19,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.70377e-22;MQSB=0.954215;RPB=0.212348;SGB=42.8227;VDB=0.783235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.4:21521628 chr04:021521628 0 W/21521628-21521628 FN2536-S SNP T -> A AC=1;AN=198;BQB=0.915404;DP=4335;DP4=2147,1951,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13228e-06;MQSB=0.794305;RPB=0.968583;SGB=40.3588;VDB=0.678333;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.4:21523172 chr04:021523172 0 W/21523172-21523172 W472-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1534-S.SNP.4:21523752 chr04:021523752 0 W/21523752-21523752 FN1534-S Single Base Substitution A-C INTERGENIC Homo SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2475.SNP.4:21523875 chr04:021523875 0 W/21523875-21523875 FN2475 SNP C -> T AC=1;AN=200;BQB=0.881121;DP=4643;DP4=2103,2293,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.35093e-07;MQSB=0.991165;RPB=0.0826584;SGB=11.2488;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.4:21528273 chr04:021528273 0 W/21528273-21528273 FN-104 Single Base Substitution T-C INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3311-S.SNP.4:21531164 chr04:021531164 0 W/21531164-21531164 FN3311-S Single Base Substitution G-A INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN4148-S.SNP.4:21531729 chr04:021531729 0 W/21531729-21531729 FN4148-S SNP T -> A AC=2;AN=170;BQB=0.995937;DP=2424;DP4=1316,997,7,15;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00247525;MQB=4.1467e-05;MQSB=0.594554;RPB=0.330643;SGB=65.8619;VDB=0.569805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.4:21534472 chr04:021534472 0 W/21534472-21534472 FN-105 Single Base Substitution T-C INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN3858-S.SNP.4:21534660 chr04:021534660 0 W/21534660-21534660 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.976789;DP=2625;DP4=1216,1305,13,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.89847e-12;MQSB=0.999507;RPB=0.402424;SGB=95.131;VDB=0.800819;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.4:21535489 chr04:021535489 0 W/21535489-21535489 FN558-S Single Base Substitution C-T INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-81.SNP.4:21535633 chr04:021535633 0 W/21535633-21535633 FN-81 Single Base Substitution C-T INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1020-S.SNP.4:21537121 chr04:021537121 0 W/21537121-21537121 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN883-S.SNP.4:21538333 chr04:021538333 0 W/21538333-21538333 FN883-S Single Base Substitution G-C INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN479-S.SNP.4:21543212 chr04:021543212 0 W/21543212-21543212 FN479-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1345-S.SNP.4:21545811 chr04:021545811 0 W/21545811-21545811 FN1345-S Single Base Substitution G-A INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2096-S.SNP.4:21548143 chr04:021548143 0 W/21548143-21548143 FN2096-S SNP G -> A AC=1;AN=168;BQB=0.0182441;DP=3898;DP4=2147,1713,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.55009e-06;MQSB=0.999999;RPB=0.907713;SGB=-154.912;VDB=0.754946;EFF=INTRON(MODIFIER||||1174|LOC_Os04g35420|protein_coding|CODING|LOC_Os04g35420.1|22|1) FN1660-S.SNP.4:21553656 chr04:021553656 0 W/21553656-21553656 FN1660-S Single Base Substitution A-T INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3951-S.SNP.4:21574524 chr04:021574524 0 W/21574524-21574524 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.990018;DP=2807;DP4=1236,1436,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0245814;MQB=0.316848;MQSB=0.0781744;RPB=0.0923269;SGB=48.4712;VDB=0.445345;EFF=INTERGENIC(MODIFIER||||||||||1) FN317-S.SNP.4:21580004 chr04:021580004 0 W/21580004-21580004 FN317-S Single Base Substitution C-T INTRON HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN317-S.SNP.4:21580009 chr04:021580009 0 W/21580009-21580009 FN317-S Single Base Substitution C-A INTRON HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN2210-S.SNP.4:21584761 chr04:021584761 0 W/21584761-21584761 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.943986;DP=3468;DP4=1594,1514,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000288351;MQB=0.0001972;MQSB=0.457982;RPB=0.860917;SGB=49.0954;VDB=0.437632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T130M|444|LOC_Os04g35470|protein_coding|CODING|LOC_Os04g35470.1|2|1) FN696-S.SNP.4:21587666 chr04:021587666 0 W/21587666-21587666 FN696-S Single Base Substitution G-T INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2673-S.SNP.4:21589457 chr04:021589457 0 W/21589457-21589457 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.739697;DP=4230;DP4=2154,1681,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26575e-15;MQSB=0.00112616;RPB=0.948214;SGB=137.158;VDB=0.306838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.4:21596092 chr04:021596092 0 W/21596092-21596092 FN3474-S SNP G -> A AC=2;AN=184;BQB=0.985277;DP=3190;DP4=1339,1734,18,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.34121e-19;MQSB=0.997869;RPB=0.983725;SGB=134.358;VDB=0.338475;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R99|217|LOC_Os04g35490|protein_coding|CODING|LOC_Os04g35490.1|1|1) FN1586-S.SNP.4:21608677 chr04:021608677 0 W/21608677-21608677 FN1586-S Single Base Substitution A-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2219-S.SNP.4:21617795 chr04:021617795 0 W/21617795-21617795 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.505708;DP=5189;DP4=2721,2230,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88591e-06;MQSB=0.859417;RPB=0.96636;SGB=18.552;VDB=0.632065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.4:21621831 chr04:021621831 0 W/21621831-21621831 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.85809;DP=2783;DP4=1398,1220,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42653e-06;MQSB=0.854381;RPB=0.200115;SGB=39.699;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.4:21626371 chr04:021626371 0 W/21626371-21626371 FN3678-S SNP T -> A AC=1;AN=190;BQB=0.992919;DP=2982;DP4=1374,1514,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61861e-08;MQSB=0.993502;RPB=0.759177;SGB=23.6597;VDB=0.751972;EFF=INTRON(MODIFIER||||359|LOC_Os04g35520|protein_coding|CODING|LOC_Os04g35520.1|2|1),INTRON(MODIFIER||||359|LOC_Os04g35520|protein_coding|CODING|LOC_Os04g35520.2|2|1),INTRON(MODIFIER||||359|LOC_Os04g35520|protein_coding|CODING|LOC_Os04g35520.3|2|1),INTRON(MODIFIER||||358|LOC_Os04g35520|protein_coding|CODING|LOC_Os04g35520.4|2|1) FN2330.SNP.4:21628924 chr04:021628924 0 W/21628924-21628924 FN2330 SNP G -> A AC=1;AN=192;BQB=0.753935;DP=5401;DP4=2374,2582,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.93458e-17;MQSB=0.99371;RPB=0.966292;SGB=-6.8678;VDB=0.423544;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.4:21631794 chr04:021631794 0 W/21631794-21631794 FN1117-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g35530 expressed protein SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2089-S.SNP.4:21633555 chr04:021633555 0 W/21633555-21633555 FN2089-S SNP G -> T AC=2;AN=168;BQB=0.0312834;DP=4313;DP4=2355,1884,34,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.14722e-18;MQSB=0.9766;RPB=0.0812743;SGB=-233.563;VDB=0.0356795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.4:21634026 chr04:021634026 0 W/21634026-21634026 FN2608-S SNP C -> G AC=2;AN=198;BQB=0.772398;DP=4435;DP4=1966,2133,13,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.03939e-15;MQSB=0.990008;RPB=0.794978;SGB=79.6954;VDB=0.458371;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.4:21636026 chr04:021636026 0 W/21636026-21636026 FN3506-S SNP A -> G AC=2;AN=186;BQB=0.990725;DP=2597;DP4=1343,1156,8,11;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=5.55565e-11;MQSB=0.992632;RPB=0.976703;SGB=57.244;VDB=0.364623;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.4:21638400 chr04:021638400 0 W/21638400-21638400 FN1198-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN-151.SNP.4:21639815 chr04:021639815 0 W/21639815-21639815 FN-151 Single Base Substitution T-C INTRON HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1445-S.SNP.4:21643503 chr04:021643503 0 W/21643503-21643503 FN1445-S Single Base Substitution G-C INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1641-S.SNP.4:21647912 chr04:021647912 0 W/21647912-21647912 FN1641-S Single Base Substitution C-T INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3761-S.SNP.4:21655063 chr04:021655063 0 W/21655063-21655063 FN3761-S SNP A -> C AC=2;AN=190;BQB=0.726005;DP=2475;DP4=1144,1259,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.77166e-10;MQSB=0.979129;RPB=0.992475;SGB=38.983;VDB=0.33455;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.4:21663152 chr04:021663152 0 W/21663152-21663152 FN466-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g35560 glutathione S-transferase, putative, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-245.SNP.4:21664196 chr04:021664196 0 W/21664196-21664196 FN-245 Single Base Substitution T-G UTR_5_PRIME HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN792-S.SNP.4:21665147 chr04:021665147 0 W/21665147-21665147 FN792-S Single Base Substitution G-A INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN3822-S.SNP.4:21666845 chr04:021666845 0 W/21666845-21666845 FN3822-S SNP G -> A AC=1;AN=190;BQB=0.842661;DP=3801;DP4=1470,2144,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.77866e-05;MQSB=0.753791;RPB=0.856858;SGB=28.9929;VDB=0.131446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.4:21667449 chr04:021667449 0 W/21667449-21667449 FN3513-S SNP C -> G AC=1;AN=188;BQB=0.851202;DP=2852;DP4=1334,1271,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.59949e-07;MQSB=0.956057;RPB=0.994523;SGB=28.8977;VDB=0.688637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.4:21674521 chr04:021674521 0 W/21674521-21674521 FN1269-S Single Base Substitution A-C INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN4078-S.SNP.4:21680455 chr04:021680455 0 W/21680455-21680455 FN4078-S SNP A -> T AC=2;AN=182;BQB=0.608456;DP=2249;DP4=1132,1034,6,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=0.00014515;MQSB=0.98531;RPB=0.643749;SGB=39.6007;VDB=0.416035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.4:21689251 chr04:021689251 0 W/21689251-21689251 FN1227-S Single Base Substitution A-G INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-166.SNP.4:21699147 chr04:021699147 0 W/21699147-21699147 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN4078-S.SNP.4:21699147 chr04:021699147 0 W/21699147-21699147 FN4078-S SNP G -> A AC=2;AN=182;BQB=0.990409;DP=2737;DP4=1350,1277,8,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.83423e-08;MQSB=0.963976;RPB=0.587185;SGB=23.1441;VDB=0.337981;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.4:21699147 chr04:021699147 0 W/21699147-21699147 FN4156-S SNP G -> A AC=1;AN=170;BQB=0.689894;DP=2240;DP4=958,1166,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.95007e-05;MQSB=0.840596;RPB=0.500402;SGB=10.1134;VDB=0.7858;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.4:21699983 chr04:021699983 0 W/21699983-21699983 FN-309 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2559-S.SNP.4:21702312 chr04:021702312 0 W/21702312-21702312 FN2559-S SNP G -> C AC=1;AN=198;BQB=0.973577;DP=4029;DP4=2072,1743,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.8332e-07;MQSB=0.92954;RPB=0.769676;SGB=21.559;VDB=0.347065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L147V|517|LOC_Os04g35600|protein_coding|CODING|LOC_Os04g35600.1|3|1) FN2448.SNP.4:21719850 chr04:021719850 0 W/21719850-21719850 FN2448 SNP C -> T AC=1;AN=200;BQB=0.0501757;DP=4969;DP4=2094,2594,5,9;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0734554;MQB=0.402322;MQSB=2.61696e-09;RPB=0.689545;SGB=21.6694;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.4:21735990 chr04:021735990 0 W/21735990-21735990 FN1196-S Single Base Substitution G-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN2658-S.SNP.4:21745322 chr04:021745322 0 W/21745322-21745322 FN2658-S SNP T -> A AC=1;AN=200;BQB=0.574521;DP=4970;DP4=2275,2370,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201207;MQB=2.2019e-05;MQSB=0.907556;RPB=0.983995;SGB=24.2746;VDB=0.365447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.4:21749586 chr04:021749586 0 W/21749586-21749586 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.94928;DP=4210;DP4=2051,1862,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74154e-08;MQSB=0.983174;RPB=0.943133;SGB=26.2136;VDB=0.527087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.4:21757750 chr04:021757750 0 W/21757750-21757750 FN3293-S SNP C -> T AC=2;AN=184;BQB=0.647727;DP=2782;DP4=1415,1263,19,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.426e-19;MQSB=0.869325;RPB=0.297508;SGB=78.7544;VDB=0.496481;EFF=INTRON(MODIFIER||||708|LOC_Os04g35700|protein_coding|CODING|LOC_Os04g35700.1|1|1),INTRON(MODIFIER||||600|LOC_Os04g35700|protein_coding|CODING|LOC_Os04g35700.2|1|1) FN1625-S.SNP.4:21765384 chr04:021765384 0 W/21765384-21765384 FN1625-S Single Base Substitution G-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.4:21765384 chr04:021765384 0 W/21765384-21765384 FN1626-S SNP G -> A AC=2;AN=188;BQB=1;DP=2420;DP4=1128,1245,15,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.64073e-14;MQSB=0.99746;RPB=0.808606;SGB=46.4225;VDB=0.597552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.4:21765384 chr04:021765384 0 W/21765384-21765384 FN2482 SNP G -> A AC=1;AN=200;BQB=0.387524;DP=4796;DP4=2172,2375,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.19928e-10;MQSB=0.965893;RPB=0.402776;SGB=68.0801;VDB=0.00349252;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.4:21766876 chr04:021766876 0 W/21766876-21766876 FN-231 Single Base Substitution G-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2530-S.SNP.4:21774360 chr04:021774360 0 W/21774360-21774360 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.801133;DP=4167;DP4=1761,1712,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22853e-09;MQSB=0.302137;RPB=0.166628;SGB=-161.43;VDB=0.433253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.4:21774615 chr04:021774615 0 W/21774615-21774615 FN2239-S SNP T -> G AC=2;AN=190;BQB=0.446712;DP=5054;DP4=2261,2444,9,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.40589e-17;MQSB=0.727283;RPB=0.706745;SGB=135.619;VDB=0.192409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.4:21776572 chr04:021776572 0 W/21776572-21776572 FN2667-S SNP G -> A AC=2;AN=200;BQB=0.986101;DP=4500;DP4=2054,2180,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.4326e-22;MQSB=0.928116;RPB=0.338158;SGB=94.6142;VDB=0.288662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.4:21778745 chr04:021778745 0 W/21778745-21778745 FN2142-S SNP A -> G AC=1;AN=168;BQB=0.131744;DP=3604;DP4=1561,2020,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.80781e-05;MQSB=0.996791;RPB=0.996705;SGB=-16.665;VDB=0.297974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.4:21783113 chr04:021783113 0 W/21783113-21783113 FN1643-S Single Base Substitution G-A INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN4022-S.SNP.4:21790397 chr04:021790397 0 W/21790397-21790397 FN4022-S SNP G -> A AC=2;AN=168;BQB=0.986866;DP=2554;DP4=1063,1374,5,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61226e-08;MQSB=0.982503;RPB=0.999161;SGB=61.0344;VDB=0.959174;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.4:21799699 chr04:021799699 0 W/21799699-21799699 CW-631-3-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g35780 expressed protein SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1237-S.SNP.4:21803671 chr04:021803671 0 W/21803671-21803671 FN1237-S Single Base Substitution G-A INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN622-S.SNP.4:21809560 chr04:021809560 0 W/21809560-21809560 FN622-S Single Base Substitution G-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN959-S.SNP.4:21809983 chr04:021809983 0 W/21809983-21809983 FN959-S Single Base Substitution C-A INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN959-S.SNP.4:21809984 chr04:021809984 0 W/21809984-21809984 FN959-S Single Base Substitution G-A INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1630-S.SNP.4:21810413 chr04:021810413 0 W/21810413-21810413 FN1630-S Single Base Substitution T-A INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2252-S.SNP.4:21810727 chr04:021810727 0 W/21810727-21810727 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.0489316;DP=4354;DP4=1854,2104,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.93275e-05;MQSB=1.16878e-11;RPB=0.0884729;SGB=15.9981;VDB=0.0607873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:21810963 chr04:021810963 0 W/21810963-21810963 FN2657-S SNP T -> C AC=1;AN=200;BQB=0.972107;DP=4255;DP4=1846,2008,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.18877e-12;MQSB=0.792237;RPB=0.998828;SGB=11.0951;VDB=0.635981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.4:21814789 chr04:021814789 0 W/21814789-21814789 FN1097-S Single Base Substitution A-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1528-S.SNP.4:21825147 chr04:021825147 0 W/21825147-21825147 FN1528-S Single Base Substitution C-T INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2609-S.SNP.4:21834888 chr04:021834888 0 W/21834888-21834888 FN2609-S SNP T -> A AC=1;AN=198;BQB=0.911001;DP=4277;DP4=2387,1647,23,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.96393e-18;MQSB=5.64119e-09;RPB=0.581594;SGB=86.437;VDB=0.13648;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.4:21836377 chr04:021836377 0 W/21836377-21836377 FN3401-S SNP G -> A AC=2;AN=184;BQB=0.96993;DP=2752;DP4=1471,1185,19,9;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.1816e-12;MQSB=0.554567;RPB=0.664073;SGB=121.091;VDB=0.488396;EFF=INTRON(MODIFIER||||157|LOC_Os04g35830|protein_coding|CODING|LOC_Os04g35830.1|1|1) FN-195.SNP.4:21836866 chr04:021836866 0 W/21836866-21836866 FN-195 Single Base Substitution T-C INTRON HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN512-S.SNP.4:21840637 chr04:021840637 0 W/21840637-21840637 FN512-S Single Base Substitution A-C INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3470-S.SNP.4:21841012 chr04:021841012 0 W/21841012-21841012 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.98837;DP=2457;DP4=1352,1029,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43556e-13;MQSB=0.00459265;RPB=0.0382115;SGB=89.4385;VDB=0.155328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.4:21841013 chr04:021841013 0 W/21841013-21841013 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.892709;DP=2444;DP4=1340,1027,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.80494e-12;MQSB=0.00381116;RPB=0.0230926;SGB=80.3949;VDB=0.104408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.4:21841014 chr04:021841014 0 W/21841014-21841014 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.763567;DP=2422;DP4=1315,1022,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.75384e-13;MQSB=0.00690161;RPB=0.0806764;SGB=84.9167;VDB=0.227621;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.4:21845347 chr04:021845347 0 W/21845347-21845347 FN1436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g35840 T-complex protein 11, putative, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3930-S.SNP.4:21866712 chr04:021866712 0 W/21866712-21866712 FN3930-S SNP T -> A AC=1;AN=158;BQB=0.361533;DP=2457;DP4=1100,1277,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.03949e-07;MQSB=0.94419;RPB=0.932282;SGB=47.5512;VDB=0.319005;EFF=INTRON(MODIFIER||||433|LOC_Os04g35880|protein_coding|CODING|LOC_Os04g35880.1|1|1) W443-5-1-3.SNP.4:21867694 chr04:021867694 0 W/21867694-21867694 W443-5-1-3 Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3828-S.SNP.4:21870515 chr04:021870515 0 W/21870515-21870515 FN3828-S SNP A -> T AC=1;AN=190;BQB=0.886533;DP=2894;DP4=1414,1370,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44147e-06;MQSB=0.944967;RPB=0.327178;SGB=13.4442;VDB=0.228818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.4:21874528 chr04:021874528 0 W/21874528-21874528 FN3825-S SNP G -> A AC=1;AN=190;BQB=0.985197;DP=2519;DP4=1130,1307,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.86493e-09;MQSB=0.999992;RPB=0.772521;SGB=39.6545;VDB=0.32629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.4:21877173 chr04:021877173 0 W/21877173-21877173 FN2293 SNP T -> G AC=1;AN=192;BQB=0.712327;DP=5213;DP4=2250,2691,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.42436e-10;MQSB=0.937221;RPB=0.726865;SGB=76.5965;VDB=0.86563;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.4:21879189 chr04:021879189 0 W/21879189-21879189 FN909-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN685-S.SNP.4:21883383 chr04:021883383 0 W/21883383-21883383 FN685-S Single Base Substitution A-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3293-S.SNP.4:21893683 chr04:021893683 0 W/21893683-21893683 FN3293-S SNP A -> C AC=2;AN=184;BQB=0.758565;DP=2730;DP4=1235,1228,16,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.62487e-22;MQSB=0.963979;RPB=0.363043;SGB=123.793;VDB=0.661454;EFF=UTR_3_PRIME(MODIFIER||61||329|LOC_Os04g35910|protein_coding|CODING|LOC_Os04g35910.1|4|1) FN3831-S.SNP.4:21903401 chr04:021903401 0 W/21903401-21903401 FN3831-S SNP C -> G AC=2;AN=190;BQB=0.974409;DP=2584;DP4=1201,1281,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.10584e-17;MQSB=0.958991;RPB=0.900676;SGB=54.3062;VDB=0.316485;EFF=INTRON(MODIFIER||||507|LOC_Os04g35920|protein_coding|CODING|LOC_Os04g35920.2|1|1) FN666-S.SNP.4:21904148 chr04:021904148 0 W/21904148-21904148 FN666-S Single Base Substitution A-C INTRON HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN899-S.SNP.4:21910966 chr04:021910966 0 W/21910966-21910966 FN899-S Single Base Substitution T-C INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2093-S.SNP.4:21916883 chr04:021916883 0 W/21916883-21916883 FN2093-S SNP G -> T AC=1;AN=168;BQB=0.88408;DP=1741;DP4=958,738,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.170592;MQB=0.982997;MQSB=0;RPB=0.736738;SGB=24.6155;VDB=0.706638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K281N|1916|LOC_Os04g35950|protein_coding|CODING|LOC_Os04g35950.1|1|1) FN2093-S.SNP.4:21916884 chr04:021916884 0 W/21916884-21916884 FN2093-S SNP G -> T AC=1;AN=168;BQB=0.593913;DP=1754;DP4=965,748,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.172178;MQB=0.953099;MQSB=0;RPB=0.46677;SGB=56.6036;VDB=0.568866;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G282*|1916|LOC_Os04g35950|protein_coding|CODING|LOC_Os04g35950.1|1|1);LOF=(LOC_Os04g35950|LOC_Os04g35950|1|1.00);NMD=(LOC_Os04g35950|LOC_Os04g35950|1|1.00) FN3838-S.SNP.4:21920965 chr04:021920965 0 W/21920965-21920965 FN3838-S SNP T -> G AC=1;AN=190;BQB=0.979985;DP=2868;DP4=1477,1275,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.133891;MQB=0.75343;MQSB=0.000444823;RPB=0.3704;SGB=62.7569;VDB=0.58975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I1550S|1916|LOC_Os04g35950|protein_coding|CODING|LOC_Os04g35950.1|4|1) FN2383.SNP.4:21923802 chr04:021923802 0 W/21923802-21923802 FN2383 SNP C -> T AC=2;AN=192;BQB=0.990307;DP=5002;DP4=2303,2376,12,8;HOB=0.0206163;ICB=0.494846;MQ=35;MQ0F=0.087565;MQB=0.707094;MQSB=4.03595e-16;RPB=0.997374;SGB=61.1661;VDB=0.638587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A707T|956|LOC_Os04g35960|protein_coding|CODING|LOC_Os04g35960.1|3|1) FN855-S.SNP.4:21925295 chr04:021925295 0 W/21925295-21925295 FN855-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN1385-S.SNP.4:21930391 chr04:021930391 0 W/21930391-21930391 FN1385-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2683-S.SNP.4:21935240 chr04:021935240 0 W/21935240-21935240 FN2683-S SNP G -> A AC=2;AN=200;BQB=0.376908;DP=4773;DP4=2104,2395,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.88886e-21;MQSB=0.973188;RPB=0.993008;SGB=84.1935;VDB=0.858256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.4:21939352 chr04:021939352 0 W/21939352-21939352 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.715406;DP=1588;DP4=820,681,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.55003e-10;MQSB=0.971791;RPB=0.444198;SGB=24.6155;VDB=0.183073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.4:21942391 chr04:021942391 0 W/21942391-21942391 FN1640-S Single Base Substitution T-C INTRON HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2210-S.SNP.4:21945439 chr04:021945439 0 W/21945439-21945439 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.661027;DP=5020;DP4=2544,2158,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.75874e-07;MQSB=0.961804;RPB=0.467257;SGB=7.21887;VDB=0.977212;EFF=INTRON(MODIFIER||||466|LOC_Os04g35990|protein_coding|CODING|LOC_Os04g35990.1|1|1) FN_814-7-1.SNP.4:21945637 chr04:021945637 0 W/21945637-21945637 FN_814-7-1 Single Base Substitution G-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN4050-S.SNP.4:21948932 chr04:021948932 0 W/21948932-21948932 FN4050-S SNP G -> A AC=1;AN=168;BQB=0.932429;DP=2577;DP4=1227,1265,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20305e-10;MQSB=0.682289;RPB=0.711712;SGB=69.8961;VDB=0.297823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T413I|457|LOC_Os04g36000|protein_coding|CODING|LOC_Os04g36000.1|5|1) FN2556-S.SNP.4:21955894 chr04:021955894 0 W/21955894-21955894 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.9999;DP=4307;DP4=1988,1984,15,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00023218;MQB=4.3171e-19;MQSB=0.84822;RPB=0.689246;SGB=73.4614;VDB=0.0178922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.4:21956394 chr04:021956394 0 W/21956394-21956394 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.957394;DP=2593;DP4=1272,1235,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79019e-06;MQSB=0.999541;RPB=0.190637;SGB=28.9929;VDB=0.572721;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.4:21958892 chr04:021958892 0 W/21958892-21958892 FN75-S-43 SNP G -> C AC=1;AN=190;BQB=0.533561;DP=4580;DP4=2265,1940,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000218341;MQB=7.81973e-09;MQSB=0.988437;RPB=0.265554;SGB=21.1058;VDB=0.115538;EFF=INTRON(MODIFIER||||335|LOC_Os04g36010|protein_coding|CODING|LOC_Os04g36010.1|1|1) FN3488-S.SNP.4:21965619 chr04:021965619 0 W/21965619-21965619 FN3488-S SNP C -> T AC=2;AN=184;BQB=0.950969;DP=3567;DP4=1490,1975,12,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.56789e-18;MQSB=0.974521;RPB=0.678328;SGB=130.135;VDB=0.024937;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P91|291|LOC_Os04g36020|protein_coding|CODING|LOC_Os04g36020.1|1|1) FN3488-S.SNP.4:21965620 chr04:021965620 0 W/21965620-21965620 FN3488-S SNP G -> A AC=2;AN=184;BQB=0.96691;DP=3554;DP4=1477,1975,11,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.89697e-19;MQSB=0.93131;RPB=0.558692;SGB=99.14;VDB=0.0258068;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P91L|291|LOC_Os04g36020|protein_coding|CODING|LOC_Os04g36020.1|1|1) FN520-S.SNP.4:21966459 chr04:021966459 0 W/21966459-21966459 FN520-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g36030 AIG1, putative, expressed SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN520-S.SNP.4:21966460 chr04:021966460 0 W/21966460-21966460 FN520-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g36030 AIG1, putative, expressed SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN517-S.SNP.4:21966890 chr04:021966890 0 W/21966890-21966890 FN517-S Single Base Substitution T-A INTRON HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN4022-S.SNP.4:21970826 chr04:021970826 0 W/21970826-21970826 FN4022-S SNP A -> G AC=2;AN=168;BQB=0.979001;DP=2609;DP4=1366,1103,12,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.68856e-11;MQSB=0.984015;RPB=0.422599;SGB=72.4869;VDB=0.918653;EFF=UTR_3_PRIME(MODIFIER||188||611|LOC_Os04g36040|protein_coding|CODING|LOC_Os04g36040.1|5|1) FN3332-S.SNP.4:21978314 chr04:021978314 0 W/21978314-21978314 FN3332-S SNP G -> C AC=1;AN=184;BQB=0.892327;DP=2863;DP4=1425,1317,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.33454e-08;MQSB=0.996479;RPB=0.869224;SGB=25.7969;VDB=0.86937;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.4:21978440 chr04:021978440 0 W/21978440-21978440 FN774-S Single Base Substitution G-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2226-S.SNP.4:21983098 chr04:021983098 0 W/21983098-21983098 FN2226-S SNP T -> A AC=2;AN=190;BQB=0.83527;DP=4938;DP4=2454,2230,18,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.75881e-15;MQSB=0.984435;RPB=0.94485;SGB=64.5217;VDB=0.496537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.4:21985581 chr04:021985581 0 W/21985581-21985581 FN1153-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN493-S.SNP.4:21988435 chr04:021988435 0 W/21988435-21988435 FN493-S Single Base Substitution T-A INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-293.SNP.4:21989519 chr04:021989519 0 W/21989519-21989519 FN-293 Single Base Substitution G-T UTR_3_PRIME HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2301.SNP.4:21990324 chr04:021990324 0 W/21990324-21990324 FN2301 SNP T -> C AC=1;AN=192;BQB=0.999744;DP=4944;DP4=2428,2158,4,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.0381e-06;MQSB=0.67544;RPB=0.0799114;SGB=29.087;VDB=0.0107754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D521G|607|LOC_Os04g36050|protein_coding|CODING|LOC_Os04g36050.1|11|1) FN2174-S.SNP.4:21994652 chr04:021994652 0 W/21994652-21994652 FN2174-S SNP A -> G AC=1;AN=168;BQB=0.000146541;DP=1764;DP4=663,952,6,19;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.337454;MQSB=4.2039e-45;RPB=0.487918;SGB=-218.331;VDB=0.232984;EFF=INTRON(MODIFIER||||607|LOC_Os04g36050|protein_coding|CODING|LOC_Os04g36050.1|1|1) FN2230-S.SNP.4:21995153 chr04:021995153 0 W/21995153-21995153 FN2230-S SNP C -> A AC=1;AN=190;BQB=0.174039;DP=3699;DP4=1673,1495,12,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.49756e-06;MQSB=0.410196;RPB=0.986877;SGB=-53.0886;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.4:22012616 chr04:022012616 0 W/22012616-22012616 FN-192 Single Base Substitution C-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2465.SNP.4:22012700 chr04:022012700 0 W/22012700-22012700 FN2465 SNP C -> T AC=1;AN=200;BQB=0.00133167;DP=3389;DP4=1152,1801,4,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000295072;MQB=2.27032e-07;MQSB=6.85062e-10;RPB=0.752765;SGB=-13.1102;VDB=0.244289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.4:22021216 chr04:022021216 0 W/22021216-22021216 FN1509-S Single Base Substitution C-A INTRON Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3923-S.SNP.4:22044139 chr04:022044139 0 W/22044139-22044139 FN3923-S SNP T -> A AC=2;AN=158;BQB=0.733212;DP=2973;DP4=1138,1651,10,19;HOB=0.024996;ICB=0.493752;MQ=38;MQ0F=0.0198453;MQB=0.944209;MQSB=0.764223;RPB=0.138332;SGB=121.348;VDB=0.658029;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.4:22054484 chr04:022054484 0 W/22054484-22054484 FN-307 Single Base Substitution T-C INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN_814-7-1.SNP.4:22059472 chr04:022059472 0 W/22059472-22059472 FN_814-7-1 Single Base Substitution A-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN661-S.SNP.4:22070835 chr04:022070835 0 W/22070835-22070835 FN661-S Single Base Substitution C-T INTRON HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. 701-3.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 701-3 Single Base Substitution G-A INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN-114.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN-114 Single Base Substitution G-A INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1670-S.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN1670-S SNP G -> A AC=2;AN=188;BQB=0.938467;DP=2725;DP4=1281,1371,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.1162e-20;MQSB=0.99592;RPB=0.981635;SGB=66.7689;VDB=0.312789;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.96549;DP=2794;DP4=1276,1438,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.2507e-07;MQSB=0.994624;RPB=0.992955;SGB=47.8722;VDB=0.0211831;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN467-S.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN467-S Single Base Substitution G-A INTERGENIC HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.4:22072944 chr04:022072944 0 W/22072944-22072944 FN871-S Single Base Substitution G-A INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3851-S.SNP.4:22079078 chr04:022079078 0 W/22079078-22079078 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.918698;DP=2378;DP4=1343,934,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.22022e-06;MQSB=0.981225;RPB=0.889216;SGB=51.4366;VDB=0.376676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T131I|165|LOC_Os04g36600|protein_coding|CODING|LOC_Os04g36600.1|1|1) FN2212-S.SNP.4:22083923 chr04:022083923 0 W/22083923-22083923 FN2212-S SNP G -> A AC=1;AN=190;BQB=0.938473;DP=3726;DP4=1857,1591,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.99952e-09;MQSB=0.295077;RPB=0.962659;SGB=62.7569;VDB=0.67157;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G84|500|LOC_Os04g36610|protein_coding|CODING|LOC_Os04g36610.1|2|1) FN854-S.SNP.4:22087976 chr04:022087976 0 W/22087976-22087976 FN854-S Single Base Substitution C-A INTRON HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN442-S.SNP.4:22091823 chr04:022091823 0 W/22091823-22091823 FN442-S Single Base Substitution A-G INTRON HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1379-S.SNP.4:22094978 chr04:022094978 0 W/22094978-22094978 FN1379-S Single Base Substitution T-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2797-S.SNP.4:22096141 chr04:022096141 0 W/22096141-22096141 FN2797-S SNP T -> G AC=1;AN=198;BQB=0.937904;DP=4106;DP4=2013,1718,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.56628e-12;MQSB=0.97243;RPB=0.431823;SGB=44.9151;VDB=0.532803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agC|R45S|318|LOC_Os04g36630|protein_coding|CODING|LOC_Os04g36630.1|2|1) FN2430.SNP.4:22129540 chr04:022129540 0 W/22129540-22129540 FN2430 SNP T -> A AC=2;AN=200;BQB=0.14064;DP=5203;DP4=2362,2584,36,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.60896e-35;MQSB=0.00124328;RPB=0.995596;SGB=80.1174;VDB=0.821923;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.4:22129698 chr04:022129698 0 W/22129698-22129698 FN794-S Single Base Substitution C-T INTERGENIC HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN-371.SNP.4:22130019 chr04:022130019 0 W/22130019-22130019 FN-371 Single Base Substitution A-T INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN473-S.SNP.4:22153576 chr04:022153576 0 W/22153576-22153576 FN473-S Single Base Substitution A-G INTRON HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1732-S.SNP.4:22156746 chr04:022156746 0 W/22156746-22156746 FN1732-S SNP T -> C AC=2;AN=188;BQB=0.853464;DP=3578;DP4=1789,1717,23,32;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.28434e-28;MQSB=0.977959;RPB=0.890082;SGB=6.18874;VDB=0.402627;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.4:22157335 chr04:022157335 0 W/22157335-22157335 FN550-S Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN550-S.SNP.4:22157336 chr04:022157336 0 W/22157336-22157336 FN550-S Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN3559-S.SNP.4:22157492 chr04:022157492 0 W/22157492-22157492 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.631866;DP=2408;DP4=1202,1137,7,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.08352e-12;MQSB=0.952273;RPB=0.80166;SGB=112.585;VDB=0.805707;EFF=START_GAINED(LOW||||178|LOC_Os04g36670|protein_coding|CODING|LOC_Os04g36670.1|1|1),UTR_5_PRIME(MODIFIER||1017||178|LOC_Os04g36670|protein_coding|CODING|LOC_Os04g36670.1|1|1) FN1482-S.SNP.4:22160088 chr04:022160088 0 W/22160088-22160088 FN1482-S Single Base Substitution T-C INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN3370-S.SNP.4:22160467 chr04:022160467 0 W/22160467-22160467 FN3370-S SNP C -> T AC=2;AN=184;BQB=2.47986e-11;DP=3121;DP4=1733,1240,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.38934e-09;MQSB=0.998278;RPB=0.925283;SGB=107.526;VDB=0.588414;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.4:22161652 chr04:022161652 0 W/22161652-22161652 FN867-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2609-S.SNP.4:22164711 chr04:022164711 0 W/22164711-22164711 FN2609-S SNP T -> C AC=1;AN=198;BQB=0.999348;DP=4828;DP4=2292,2299,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.09253e-15;MQSB=0.269304;RPB=0.999913;SGB=86.8856;VDB=0.68262;EFF=INTRON(MODIFIER||||476|LOC_Os04g36680|protein_coding|CODING|LOC_Os04g36680.1|4|1) FN1195-S.SNP.4:22171790 chr04:022171790 0 W/22171790-22171790 FN1195-S Single Base Substitution A-T INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3970-S.SNP.4:22180827 chr04:022180827 0 W/22180827-22180827 FN3970-S SNP A -> G AC=1;AN=168;BQB=0.871187;DP=2374;DP4=956,1313,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29201e-07;MQSB=0.296239;RPB=0.977525;SGB=51.902;VDB=0.32022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.4:22180849 chr04:022180849 0 W/22180849-22180849 FN2491 SNP C -> T AC=2;AN=200;BQB=0.911485;DP=4463;DP4=1639,2541,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000224065;MQB=3.22707e-18;MQSB=0.62054;RPB=0.996926;SGB=132.552;VDB=0.269996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.4:22189773 chr04:022189773 0 W/22189773-22189773 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.034012;DP=3515;DP4=1976,1489,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03094e-05;MQSB=0.849928;RPB=0.132241;SGB=-153.343;VDB=0.583355;EFF=INTRON(MODIFIER||||256|LOC_Os04g36730|protein_coding|CODING|LOC_Os04g36730.1|2|1) FN2192-S.SNP.4:22190483 chr04:022190483 0 W/22190483-22190483 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.563906;DP=4749;DP4=2213,2265,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.40725e-11;MQSB=0.998878;RPB=0.999944;SGB=36.4291;VDB=0.995268;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L96|256|LOC_Os04g36730|protein_coding|CODING|LOC_Os04g36730.1|3|1) FN_788-1-1.SNP.4:22191006 chr04:022191006 0 W/22191006-22191006 FN_788-1-1 Single Base Substitution T-C Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN-216.SNP.4:22191783 chr04:022191783 0 W/22191783-22191783 FN-216 Single Base Substitution G-A UTR_3_PRIME HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-216.SNP.4:22191784 chr04:022191784 0 W/22191784-22191784 FN-216 Single Base Substitution T-A UTR_3_PRIME HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN759-S.SNP.4:22196864 chr04:022196864 0 W/22196864-22196864 FN759-S Single Base Substitution A-T INTRON HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN759-S.SNP.4:22196865 chr04:022196865 0 W/22196865-22196865 FN759-S Single Base Substitution T-A INTRON HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2083-S.SNP.4:22199645 chr04:022199645 0 W/22199645-22199645 FN2083-S SNP G -> T AC=1;AN=168;BQB=0.154261;DP=4651;DP4=2142,2329,77,79;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00086003;MQB=0;MQSB=0.823609;RPB=0.584481;SGB=-3254.51;VDB=0.0291062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.4:22202826 chr04:022202826 0 W/22202826-22202826 FN1173-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2269-S.SNP.4:22204788 chr04:022204788 0 W/22204788-22204788 FN2269-S SNP G -> A AC=1;AN=190;BQB=0.622339;DP=3613;DP4=1131,2218,9,23;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.08586e-13;MQSB=3.17179e-06;RPB=0.247588;SGB=-115.667;VDB=0.318461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2404.SNP.4:22207040 chr04:022207040 0 W/22207040-22207040 FN2404 SNP C -> A AC=1;AN=200;BQB=0.833735;DP=4076;DP4=2210,1510,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.35638e-14;MQSB=0.999369;RPB=0.721237;SGB=27.1468;VDB=0.55787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L15I|108|LOC_Os04g36780|protein_coding|CODING|LOC_Os04g36780.1|1|1) W247-2-1.SNP.4:22208180 chr04:022208180 0 W/22208180-22208180 W247-2-1 Single Base Substitution T-G INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN4271-S.SNP.4:22209905 chr04:022209905 0 W/22209905-22209905 FN4271-S SNP C -> A AC=1;AN=170;BQB=0.94073;DP=2527;DP4=1198,1261,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.4692e-07;MQSB=0.870821;RPB=0.681699;SGB=43.4296;VDB=0.879703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.4:22211407 chr04:022211407 0 W/22211407-22211407 FN1543-S Single Base Substitution A-G INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN831-S.SNP.4:22220265 chr04:022220265 0 W/22220265-22220265 FN831-S Single Base Substitution C-G INTRON HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN-371.SNP.4:22230722 chr04:022230722 0 W/22230722-22230722 FN-371 Single Base Substitution T-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1119-S.SNP.4:22230722 chr04:022230722 0 W/22230722-22230722 FN1119-S Single Base Substitution T-A INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1470-S.SNP.4:22230722 chr04:022230722 0 W/22230722-22230722 FN1470-S Single Base Substitution T-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2464.SNP.4:22247088 chr04:022247088 0 W/22247088-22247088 FN2464 SNP C -> T AC=1;AN=200;BQB=0.998165;DP=4760;DP4=2432,2087,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60015e-08;MQSB=0.840833;RPB=0.667897;SGB=19.0642;VDB=0.351884;EFF=UTR_3_PRIME(MODIFIER||3||192|LOC_Os04g36859|protein_coding|CODING|LOC_Os04g36859.1|5|1),UTR_3_PRIME(MODIFIER||88||170|LOC_Os04g36859|protein_coding|CODING|LOC_Os04g36859.2|5|1) FN4039-S.SNP.4:22250360 chr04:022250360 0 W/22250360-22250360 FN4039-S SNP T -> A AC=1;AN=168;BQB=0.948725;DP=2214;DP4=1234,898,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.1098e-10;MQSB=0.956589;RPB=0.589042;SGB=31.908;VDB=0.183991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.4:22251145 chr04:022251145 0 W/22251145-22251145 FN2333 SNP G -> A AC=1;AN=192;BQB=0.977701;DP=5244;DP4=2647,2270,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.17073e-11;MQSB=0.956248;RPB=0.681349;SGB=61.1661;VDB=0.809859;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.4:22252478 chr04:022252478 0 W/22252478-22252478 FN-349 Single Base Substitution T-A INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-64.SNP.4:22253032 chr04:022253032 0 W/22253032-22253032 FN-64 Single Base Substitution C-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-288.SNP.4:22256513 chr04:022256513 0 W/22256513-22256513 FN-288 Single Base Substitution A-T INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2634-S.SNP.4:22258064 chr04:022258064 0 W/22258064-22258064 FN2634-S SNP A -> T AC=2;AN=200;BQB=0.983959;DP=4381;DP4=2039,2050,30,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.14733e-26;MQSB=0.776201;RPB=0.106938;SGB=162.845;VDB=0.234605;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.4:22264568 chr04:022264568 0 W/22264568-22264568 FN-279 Single Base Substitution G-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2285.SNP.4:22267933 chr04:022267933 0 W/22267933-22267933 FN2285 SNP A -> T AC=1;AN=192;BQB=0.846267;DP=5111;DP4=2469,2344,2,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.71631e-05;MQSB=0.701496;RPB=0.492459;SGB=40.0819;VDB=0.850504;EFF=INTRON(MODIFIER||||409|LOC_Os04g36910|protein_coding|CODING|LOC_Os04g36910.1|4|1),INTRON(MODIFIER||||272|LOC_Os04g36910|protein_coding|CODING|LOC_Os04g36910.2|3|1) FN3992-S.SNP.4:22271704 chr04:022271704 0 W/22271704-22271704 FN3992-S SNP T -> C AC=1;AN=168;BQB=0.849827;DP=2803;DP4=1417,1177,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.11256e-08;MQSB=0.37442;RPB=0.999615;SGB=38.1788;VDB=0.92859;EFF=INTRON(MODIFIER||||409|LOC_Os04g36910|protein_coding|CODING|LOC_Os04g36910.1|1|1),INTRON(MODIFIER||||272|LOC_Os04g36910|protein_coding|CODING|LOC_Os04g36910.2|1|1) FN3676-S.SNP.4:22273012 chr04:022273012 0 W/22273012-22273012 FN3676-S SNP C -> T AC=2;AN=190;BQB=0.999884;DP=2111;DP4=673,1324,2,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86901e-12;MQSB=0.674733;RPB=0.925448;SGB=68.0854;VDB=0.0788008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.4:22275782 chr04:022275782 0 W/22275782-22275782 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.383437;DP=3707;DP4=1863,1807,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.26406e-11;MQSB=0.75934;RPB=0.94335;SGB=-39.6481;VDB=0.426223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.4:22276251 chr04:022276251 0 W/22276251-22276251 FN3807-S SNP T -> C AC=1;AN=190;BQB=0.998922;DP=2700;DP4=1280,1324,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.58258e-08;MQSB=0.999299;RPB=0.361017;SGB=58.2031;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.4:22282695 chr04:022282695 0 W/22282695-22282695 FN2224-S SNP T -> C AC=1;AN=190;BQB=0.911123;DP=4568;DP4=2244,1960,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07762e-10;MQSB=0.977724;RPB=0.815113;SGB=36.4291;VDB=0.18553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.4:22285589 chr04:022285589 0 W/22285589-22285589 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.312903;DP=3430;DP4=1527,1849,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.71652e-09;MQSB=0.992534;RPB=0.999045;SGB=14.2064;VDB=0.130254;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T142|156|LOC_Os04g37410|protein_coding|CODING|LOC_Os04g37410.1|2|1) FN_846-8-1.SNP.4:22286599 chr04:022286599 0 W/22286599-22286599 FN_846-8-1 Single Base Substitution A-G HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN3286-S.SNP.4:22292443 chr04:022292443 0 W/22292443-22292443 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.988782;DP=3112;DP4=1444,1577,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05409e-06;MQSB=0.996034;RPB=0.683981;SGB=39.699;VDB=0.0523151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.4:22303708 chr04:022303708 0 W/22303708-22303708 FN3455-S SNP T -> A AC=2;AN=184;BQB=0.990085;DP=2696;DP4=1270,1285,17,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.2662e-16;MQSB=0.964827;RPB=0.469553;SGB=25.0638;VDB=0.720615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.4:22304584 chr04:022304584 0 W/22304584-22304584 FN4080-S SNP C -> T AC=1;AN=182;BQB=0.986951;DP=3430;DP4=1791,1542,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.34661e-11;MQSB=0.765598;RPB=0.562041;SGB=53.182;VDB=0.508567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.4:22323938 chr04:022323938 0 W/22323938-22323938 FN2665-S SNP C -> G AC=2;AN=200;BQB=0.96367;DP=5493;DP4=2965,2184,39,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.53088e-40;MQSB=0.778184;RPB=0.995105;SGB=242.159;VDB=0.461523;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgG|R19|357|LOC_Os04g37490|protein_coding|CODING|LOC_Os04g37490.1|1|1) FN581-S.SNP.4:22327679 chr04:022327679 0 W/22327679-22327679 FN581-S Single Base Substitution C-T INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1553-S.SNP.4:22328260 chr04:022328260 0 W/22328260-22328260 FN1553-S Single Base Substitution C-T INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN3820-S.SNP.4:22331866 chr04:022331866 0 W/22331866-22331866 FN3820-S SNP G -> T AC=1;AN=190;BQB=0.889226;DP=3282;DP4=1643,1540,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.62694e-05;MQSB=0.981872;RPB=0.87939;SGB=44.5415;VDB=0.0699221;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S395|500|LOC_Os04g37500|protein_coding|CODING|LOC_Os04g37500.1|4|1) FN2104-S.SNP.4:22333169 chr04:022333169 0 W/22333169-22333169 FN2104-S SNP G -> A AC=2;AN=168;BQB=0.6768;DP=1896;DP4=903,896,7,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000518888;MQSB=0.87156;RPB=0.402021;SGB=-2.96336;VDB=0.343845;EFF=INTERGENIC(MODIFIER||||||||||1) FN-80.SNP.4:22334892 chr04:022334892 0 W/22334892-22334892 FN-80 Single Base Substitution T-C INTERGENIC HOMO SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN2477.SNP.4:22348189 chr04:022348189 0 W/22348189-22348189 FN2477 SNP T -> A AC=1;AN=200;BQB=0.998903;DP=4102;DP4=2136,1487,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91192e-10;MQSB=0.792621;RPB=0.543397;SGB=51.0851;VDB=0.19887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M11K|454|LOC_Os04g37550|protein_coding|CODING|LOC_Os04g37550.1|1|1) FN2477.SNP.4:22348191 chr04:022348191 0 W/22348191-22348191 FN2477 SNP G -> C AC=1;AN=200;BQB=0.954784;DP=4054;DP4=2169,1613,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.44715e-12;MQSB=0.963;RPB=0.439483;SGB=58.2954;VDB=0.186135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A12P|454|LOC_Os04g37550|protein_coding|CODING|LOC_Os04g37550.1|1|1) FN1575-S.SNP.4:22349435 chr04:022349435 0 W/22349435-22349435 FN1575-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3728-S.SNP.4:22349435 chr04:022349435 0 W/22349435-22349435 FN3728-S SNP C -> T AC=2;AN=190;BQB=0.638757;DP=3205;DP4=1448,1636,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.0964e-15;MQSB=0.997078;RPB=0.841464;SGB=135.619;VDB=0.846146;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G426|454|LOC_Os04g37550|protein_coding|CODING|LOC_Os04g37550.1|1|1) FN906-S.SNP.4:22349435 chr04:022349435 0 W/22349435-22349435 FN906-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2320.SNP.4:22371478 chr04:022371478 0 W/22371478-22371478 FN2320 SNP G -> A AC=2;AN=192;BQB=0.793585;DP=5174;DP4=2303,2641,24,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.79208e-27;MQSB=0.997218;RPB=0.999899;SGB=160.968;VDB=0.533749;EFF=INTRON(MODIFIER||||659|LOC_Os04g37619|protein_coding|CODING|LOC_Os04g37619.1|1|1),INTRON(MODIFIER||||548|LOC_Os04g37619|protein_coding|CODING|LOC_Os04g37619.2|1|1) FN904-S.SNP.4:22379155 chr04:022379155 0 W/22379155-22379155 FN904-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN881-S.SNP.4:22379383 chr04:022379383 0 W/22379383-22379383 FN881-S Single Base Substitution A-T INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-30.SNP.4:22390423 chr04:022390423 0 W/22390423-22390423 FN-30 Single Base Substitution C-T INTRON Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3509-S.SNP.4:22392302 chr04:022392302 0 W/22392302-22392302 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.979228;DP=2719;DP4=1173,1468,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.90424e-07;MQSB=0.944093;RPB=0.420738;SGB=25.3545;VDB=0.0905795;EFF=INTRON(MODIFIER||||461|LOC_Os04g37660|protein_coding|CODING|LOC_Os04g37660.1|4|1),INTRON(MODIFIER||||392|LOC_Os04g37660|protein_coding|CODING|LOC_Os04g37660.2|4|1) FN2599-S.SNP.4:22401918 chr04:022401918 0 W/22401918-22401918 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.822796;DP=4295;DP4=2262,1764,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.81346e-12;MQSB=0.520126;RPB=0.967047;SGB=14.1348;VDB=0.75252;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.4:22404955 chr04:022404955 0 W/22404955-22404955 FN895-S Single Base Substitution T-C INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3890-S.SNP.4:22405857 chr04:022405857 0 W/22405857-22405857 FN3890-S SNP G -> A AC=1;AN=158;BQB=0.461541;DP=2527;DP4=1274,1110,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000428026;MQSB=0.992693;RPB=0.906394;SGB=42.6978;VDB=0.148379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.4:22407532 chr04:022407532 0 W/22407532-22407532 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.460067;DP=5182;DP4=2452,2362,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000600374;MQSB=0.454642;RPB=0.99851;SGB=-17.653;VDB=0.450112;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.4:22414660 chr04:022414660 0 W/22414660-22414660 FN488-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1108-S.SNP.4:22427400 chr04:022427400 0 W/22427400-22427400 FN1108-S Single Base Substitution G-T INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1220-S.SNP.4:22433969 chr04:022433969 0 W/22433969-22433969 FN1220-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g37720 pentatricopeptide, putative, expressed SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1022-S.SNP.4:22440294 chr04:022440294 0 W/22440294-22440294 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2704-S.SNP.4:22468058 chr04:022468058 0 W/22468058-22468058 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.681124;DP=4585;DP4=2104,2245,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.45457e-05;MQSB=0.879226;RPB=0.288788;SGB=35.8441;VDB=0.692532;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S146N|532|LOC_Os04g37790|protein_coding|CODING|LOC_Os04g37790.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S84N|470|LOC_Os04g37790|protein_coding|CODING|LOC_Os04g37790.2|3|1) FN858-S.SNP.4:22470500 chr04:022470500 0 W/22470500-22470500 FN858-S Single Base Substitution C-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN-183.SNP.4:22471492 chr04:022471492 0 W/22471492-22471492 FN-183 Single Base Substitution T-A INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. CW-631-3-1.SNP.4:22472393 chr04:022472393 0 W/22472393-22472393 CW-631-3-1 Single Base Substitution G-A SPLICE_SITE_DONOR HOMO LOC_Os04g37810 expressed protein SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2304.SNP.4:22477508 chr04:022477508 0 W/22477508-22477508 FN2304 SNP C -> A AC=2;AN=192;BQB=0.782092;DP=5067;DP4=2532,2210,32,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.1817e-30;MQSB=0.862863;RPB=0.999302;SGB=-56.2391;VDB=0.998745;EFF=INTRON(MODIFIER||||317|LOC_Os04g37810|protein_coding|CODING|LOC_Os04g37810.1|11|1),INTRON(MODIFIER||||311|LOC_Os04g37810|protein_coding|CODING|LOC_Os04g37810.2|11|1) FN2366.SNP.4:22478012 chr04:022478012 0 W/22478012-22478012 FN2366 SNP G -> T AC=1;AN=192;BQB=0.588361;DP=4777;DP4=2258,2229,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.34407e-07;MQSB=0.99686;RPB=0.885623;SGB=5.79046;VDB=0.736281;EFF=INTRON(MODIFIER||||317|LOC_Os04g37810|protein_coding|CODING|LOC_Os04g37810.1|13|1),INTRON(MODIFIER||||311|LOC_Os04g37810|protein_coding|CODING|LOC_Os04g37810.2|13|1) FN1355-S.SNP.4:22480475 chr04:022480475 0 W/22480475-22480475 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2701-S.SNP.4:22483967 chr04:022483967 0 W/22483967-22483967 FN2701-S SNP C -> T AC=2;AN=200;BQB=0.847388;DP=3052;DP4=1840,967,11,3;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000655308;MQB=4.63631e-05;MQSB=0.00328421;RPB=0.0334117;SGB=40.2696;VDB=0.692394;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.4:22484090 chr04:022484090 0 W/22484090-22484090 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-67.SNP.4:22495325 chr04:022495325 0 W/22495325-22495325 FN-67 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g37840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN3332-S.SNP.4:22495426 chr04:022495426 0 W/22495426-22495426 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.866143;DP=3340;DP4=1614,1618,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0140719;MQB=3.93522e-05;MQSB=0.00812651;RPB=0.427445;SGB=46.3132;VDB=0.225356;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1258|1516|LOC_Os04g37840|protein_coding|CODING|LOC_Os04g37840.1|1|1) FN1114-S.SNP.4:22496349 chr04:022496349 0 W/22496349-22496349 FN1114-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g37840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2593-S.SNP.4:22497074 chr04:022497074 0 W/22497074-22497074 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.946967;DP=4086;DP4=2051,1780,25,16;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00195791;MQB=1.36431e-05;MQSB=0.880318;RPB=0.97349;SGB=91.6272;VDB=0.545057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P709L|1516|LOC_Os04g37840|protein_coding|CODING|LOC_Os04g37840.1|1|1) FN1247-S.SNP.4:22503738 chr04:022503738 0 W/22503738-22503738 FN1247-S Single Base Substitution G-A INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN718-S.SNP.4:22509716 chr04:022509716 0 W/22509716-22509716 FN718-S Single Base Substitution C-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN-173.SNP.4:22511799 chr04:022511799 0 W/22511799-22511799 FN-173 Single Base Substitution G-T INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN883-S.SNP.4:22513683 chr04:022513683 0 W/22513683-22513683 FN883-S Single Base Substitution T-C INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2442.SNP.4:22529249 chr04:022529249 0 W/22529249-22529249 FN2442 SNP G -> T AC=1;AN=200;BQB=0.623277;DP=5105;DP4=2216,2664,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.37324e-09;MQSB=0.905714;RPB=0.568132;SGB=9.48993;VDB=0.0629959;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.4:22531640 chr04:022531640 0 W/22531640-22531640 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.807392;DP=2506;DP4=1146,1184,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.12619e-07;MQSB=0.999487;RPB=0.987022;SGB=42.6978;VDB=0.61315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.4:22531641 chr04:022531641 0 W/22531641-22531641 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.988098;DP=2510;DP4=1172,1240,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.21894e-06;MQSB=0.998174;RPB=0.973803;SGB=23.9652;VDB=0.755656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.4:22531642 chr04:022531642 0 W/22531642-22531642 FN3901-S SNP C -> A AC=1;AN=158;BQB=0.871824;DP=2511;DP4=1181,1237,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.13283e-07;MQSB=0.997047;RPB=0.937274;SGB=16.7104;VDB=0.280567;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.4:22533771 chr04:022533771 0 W/22533771-22533771 FN530-S Single Base Substitution G-A INTERGENIC HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN2779-S.SNP.4:22548530 chr04:022548530 0 W/22548530-22548530 FN2779-S SNP T -> A AC=2;AN=198;BQB=0.568854;DP=3211;DP4=1127,1904,6,26;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=8.93193e-14;MQSB=1.94299e-05;RPB=0.91423;SGB=104.861;VDB=0.0871611;EFF=INTERGENIC(MODIFIER||||||||||1) FN-401.SNP.4:22554804 chr04:022554804 0 W/22554804-22554804 FN-401 Single Base Substitution G-T UTR_3_PRIME HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.4:22554804 chr04:022554804 0 W/22554804-22554804 FN401-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN-401.SNP.4:22554805 chr04:022554805 0 W/22554805-22554805 FN-401 Single Base Substitution C-T UTR_3_PRIME HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.4:22554805 chr04:022554805 0 W/22554805-22554805 FN401-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN-401.SNP.4:22554806 chr04:022554806 0 W/22554806-22554806 FN-401 Single Base Substitution A-T UTR_3_PRIME HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.4:22554806 chr04:022554806 0 W/22554806-22554806 FN401-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN499-S.SNP.4:22559031 chr04:022559031 0 W/22559031-22559031 FN499-S Single Base Substitution C-T INTRON HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN540-S.SNP.4:22561798 chr04:022561798 0 W/22561798-22561798 FN540-S Single Base Substitution A-C INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN2724-S.SNP.4:22563852 chr04:022563852 0 W/22563852-22563852 FN2724-S SNP A -> G AC=1;AN=200;BQB=0.980307;DP=4952;DP4=2420,2338,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.01289e-14;MQSB=0.89332;RPB=0.993631;SGB=95.7111;VDB=0.459449;EFF=INTRON(MODIFIER||||371|LOC_Os04g37940|protein_coding|CODING|LOC_Os04g37940.1|3|1) FN3659-S.SNP.4:22568892 chr04:022568892 0 W/22568892-22568892 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.967516;DP=2852;DP4=1322,1443,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95646e-06;MQSB=0.93141;RPB=0.979687;SGB=35.4339;VDB=0.3298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P146S|367|LOC_Os04g37950|protein_coding|CODING|LOC_Os04g37950.1|4|1) FN2498.SNP.4:22569268 chr04:022569268 0 W/22569268-22569268 FN2498 SNP A -> T AC=1;AN=200;BQB=0.829709;DP=5016;DP4=2451,2334,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68608e-09;MQSB=0.990538;RPB=0.72802;SGB=58.8698;VDB=0.260041;EFF=INTRON(MODIFIER||||367|LOC_Os04g37950|protein_coding|CODING|LOC_Os04g37950.1|3|1) FN373-S.SNP.4:22572688 chr04:022572688 0 W/22572688-22572688 FN373-S Single Base Substitution A-T INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2271-S.SNP.4:22577600 chr04:022577600 0 W/22577600-22577600 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.960371;DP=3544;DP4=1727,1329,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000163715;MQSB=4.03217e-11;RPB=0.796524;SGB=39.6545;VDB=0.701899;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.4:22579487 chr04:022579487 0 W/22579487-22579487 FN427-S Single Base Substitution G-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3792-S.SNP.4:22584338 chr04:022584338 0 W/22584338-22584338 FN3792-S SNP C -> T AC=1;AN=190;BQB=0.999932;DP=2227;DP4=987,1163,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72875e-11;MQSB=0.972068;RPB=0.310901;SGB=71.8647;VDB=0.713206;EFF=INTRON(MODIFIER||||887|LOC_Os04g37960|protein_coding|CODING|LOC_Os04g37960.1|2|1) W7-1-1.SNP.4:22585233 chr04:022585233 0 W/22585233-22585233 W7-1-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. W7-1-1.SNP.4:22585234 chr04:022585234 0 W/22585234-22585234 W7-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN-98.SNP.4:22585664 chr04:022585664 0 W/22585664-22585664 FN-98 Single Base Substitution G-A INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. 707-1.SNP.4:22586400 chr04:022586400 0 W/22586400-22586400 707-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1469, Mutant_ID: 707-1, Generation: M2, Mutations: 41, Genes: 34, Seed availability: Yes. 707-2.SNP.4:22586400 chr04:022586400 0 W/22586400-22586400 707-2 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. 707-6.SNP.4:22586400 chr04:022586400 0 W/22586400-22586400 707-6 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. 707-7.SNP.4:22586400 chr04:022586400 0 W/22586400-22586400 707-7 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN2440.SNP.4:22612168 chr04:022612168 0 W/22612168-22612168 FN2440 SNP A -> C AC=1;AN=200;BQB=0.113025;DP=4497;DP4=1907,2136,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.73656e-12;MQSB=0.93637;RPB=0.914983;SGB=100.316;VDB=0.882672;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acC|T5|507|LOC_Os04g37990|protein_coding|CODING|LOC_Os04g37990.1|1|1) FN3668-S.SNP.4:22612219 chr04:022612219 0 W/22612219-22612219 FN3668-S SNP C -> A AC=1;AN=190;BQB=0.999996;DP=2867;DP4=1215,1538,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.42296e-07;MQSB=0.990105;RPB=0.992011;SGB=49.0954;VDB=0.820586;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T22|507|LOC_Os04g37990|protein_coding|CODING|LOC_Os04g37990.1|1|1) FN2158-S.SNP.4:22612673 chr04:022612673 0 W/22612673-22612673 FN2158-S SNP A -> C AC=1;AN=168;BQB=0.926551;DP=2722;DP4=1418,1245,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.41686e-05;MQSB=0.903969;RPB=0.971313;SGB=-0.101747;VDB=0.946176;EFF=INTRON(MODIFIER||||507|LOC_Os04g37990|protein_coding|CODING|LOC_Os04g37990.1|1|1) FN1550-S.SNP.4:22614247 chr04:022614247 0 W/22614247-22614247 FN1550-S Single Base Substitution G-A INTRON Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN3888-S.SNP.4:22620622 chr04:022620622 0 W/22620622-22620622 FN3888-S SNP T -> A AC=2;AN=158;BQB=0.966889;DP=2548;DP4=1109,1264,22,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.68402e-25;MQSB=0.849518;RPB=0.0624198;SGB=159.093;VDB=0.0684027;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.4:22633583 chr04:022633583 0 W/22633583-22633583 W246-5-1 Single Base Substitution G-T INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1406-S.SNP.4:22635577 chr04:022635577 0 W/22635577-22635577 FN1406-S Single Base Substitution G-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN-105.SNP.4:22637780 chr04:022637780 0 W/22637780-22637780 FN-105 Single Base Substitution G-A INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN-75.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN-75 Single Base Substitution C-T INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1271-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN1271-S Single Base Substitution C-T INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1381-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN1381-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1467-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN1467-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1519-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN1519-S Single Base Substitution C-T INTERGENIC Homo SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1712-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN1712-S SNP C -> T AC=2;AN=188;BQB=0.378606;DP=3885;DP4=1763,2063,21,27;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0002574;MQB=0.0467423;MQSB=0;RPB=0.918322;SGB=2.38567;VDB=0.130409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN2676-S SNP C -> T AC=2;AN=200;BQB=0.523271;DP=4867;DP4=2433,2202,28,27;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.000205465;MQB=5.02859e-07;MQSB=1.32829e-07;RPB=0.225171;SGB=247.682;VDB=0.0233028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.9544;DP=2869;DP4=1495,1258,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.000697107;MQB=0.0259267;MQSB=8.53225e-25;RPB=0.850948;SGB=85.5263;VDB=0.106943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3985-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN3985-S SNP C -> T AC=2;AN=168;BQB=0.964249;DP=2813;DP4=1381,1267,24,26;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.00177746;MQB=6.98835e-06;MQSB=5.08939e-26;RPB=0.455346;SGB=210.702;VDB=0.428897;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.4:22642831 chr04:022642831 0 W/22642831-22642831 FN700-S Single Base Substitution C-T INTERGENIC HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1176-S.SNP.4:22646284 chr04:022646284 0 W/22646284-22646284 FN1176-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g38042 retrotransposon protein, putative, unclassified, expressed SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3766-S.SNP.4:22657712 chr04:022657712 0 W/22657712-22657712 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.838621;DP=4368;DP4=2317,1903,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.195055;MQB=0.156129;MQSB=0.274143;RPB=0.96367;SGB=43.2083;VDB=0.738171;EFF=INTRON(MODIFIER||||858|LOC_Os04g38070|protein_coding|CODING|LOC_Os04g38070.1|1|1) FN890-S.SNP.4:22661385 chr04:022661385 0 W/22661385-22661385 FN890-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g38070 retrotransposon protein, putative, unclassified, expressed SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2470.SNP.4:22662251 chr04:022662251 0 W/22662251-22662251 FN2470 SNP G -> A AC=1;AN=200;BQB=0.657144;DP=3798;DP4=1885,1642,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000263296;MQB=2.62988e-10;MQSB=0.40271;RPB=0.715719;SGB=54.6902;VDB=0.170987;EFF=INTRON(MODIFIER||||858|LOC_Os04g38070|protein_coding|CODING|LOC_Os04g38070.1|4|1) FN260-S.SNP.4:22668530 chr04:022668530 0 W/22668530-22668530 FN260-S Single Base Substitution G-A INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN438-S.SNP.4:22673090 chr04:022673090 0 W/22673090-22673090 FN438-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g38090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN3729-S.SNP.4:22681459 chr04:022681459 0 W/22681459-22681459 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.89648;DP=3372;DP4=1604,1642,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.213523;MQB=0.971576;MQSB=0.00014894;RPB=0.922732;SGB=76.4186;VDB=0.690584;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P267L|508|LOC_Os04g38110|protein_coding|CODING|LOC_Os04g38110.1|2|1) FN1675-S.SNP.4:22710374 chr04:022710374 0 W/22710374-22710374 FN1675-S SNP C -> T AC=1;AN=188;BQB=0.617146;DP=1291;DP4=614,618,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0131681;MQB=0.0557152;MQSB=0.669801;RPB=0.714457;SGB=0.908326;VDB=0.329783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V140M|359|LOC_Os04g38160|protein_coding|CODING|LOC_Os04g38160.1|1|1) FN1410-S.SNP.4:22715379 chr04:022715379 0 W/22715379-22715379 FN1410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2731-S.SNP.4:22720674 chr04:022720674 0 W/22720674-22720674 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.854634;DP=4674;DP4=2218,2133,12,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0325203;MQB=0.262629;MQSB=0.0176052;RPB=0.282726;SGB=37.3004;VDB=0.0341362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F422S|1635|LOC_Os04g38180|protein_coding|CODING|LOC_Os04g38180.1|5|1) FN3547-S.SNP.4:22721276 chr04:022721276 0 W/22721276-22721276 FN3547-S SNP A -> T AC=1;AN=188;BQB=0.921559;DP=3760;DP4=2276,1334,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0319149;MQB=0.927667;MQSB=1.33769e-35;RPB=0.357605;SGB=43.0708;VDB=0.399144;EFF=INTRON(MODIFIER||||1635|LOC_Os04g38180|protein_coding|CODING|LOC_Os04g38180.1|3|1) FN1463-S.SNP.4:22724307 chr04:022724307 0 W/22724307-22724307 FN1463-S Single Base Substitution C-T INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3668-S.SNP.4:22729646 chr04:022729646 0 W/22729646-22729646 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.999716;DP=3030;DP4=1511,1431,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0280528;MQB=0.594217;MQSB=4.66328e-09;RPB=0.984314;SGB=58.2031;VDB=0.946183;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q632*|1807|LOC_Os04g38190|protein_coding|CODING|LOC_Os04g38190.1|3|1);LOF=(LOC_Os04g38190|LOC_Os04g38190|1|1.00);NMD=(LOC_Os04g38190|LOC_Os04g38190|1|1.00) FN1723-S.SNP.4:22738480 chr04:022738480 0 W/22738480-22738480 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.0277817;DP=1825;DP4=841,927,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0013054;MQSB=0.958961;RPB=0.686703;SGB=-14.9998;VDB=0.144573;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.4:22739386 chr04:022739386 0 W/22739386-22739386 FN242-S Single Base Substitution C-T INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN-66.SNP.4:22746071 chr04:022746071 0 W/22746071-22746071 FN-66 Single Base Substitution A-T INTRON HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN473-S.SNP.4:22749953 chr04:022749953 0 W/22749953-22749953 FN473-S Single Base Substitution A-C INTRON HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN2729-S.SNP.4:22772961 chr04:022772961 0 W/22772961-22772961 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.727564;DP=4545;DP4=2174,2084,8,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.77333e-07;MQSB=0.00301675;RPB=0.930265;SGB=63.4749;VDB=0.795035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.4:22775389 chr04:022775389 0 W/22775389-22775389 FN3848-S SNP A -> C AC=1;AN=158;BQB=0.563582;DP=2474;DP4=1181,1228,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.44095e-07;MQSB=0.954799;RPB=0.978034;SGB=16.7104;VDB=0.104618;EFF=INTRON(MODIFIER||||291|LOC_Os04g38270|protein_coding|CODING|LOC_Os04g38270.1|3|1) FN2446.SNP.4:22782549 chr04:022782549 0 W/22782549-22782549 FN2446 SNP A -> C AC=1;AN=200;BQB=0.971554;DP=5138;DP4=2580,2282,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27684e-07;MQSB=0.893387;RPB=0.928822;SGB=36.6644;VDB=0.156529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.4:22782550 chr04:022782550 0 W/22782550-22782550 FN2446 SNP C -> T AC=1;AN=200;BQB=0.638771;DP=5151;DP4=2617,2310,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10999e-08;MQSB=0.862757;RPB=0.72306;SGB=49.6594;VDB=0.103498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.4:22807544 chr04:022807544 0 W/22807544-22807544 FN2455 SNP T -> A AC=1;AN=200;BQB=0.851932;DP=4572;DP4=2279,2023,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218723;MQB=5.8798e-16;MQSB=0.863764;RPB=0.650383;SGB=101.557;VDB=0.941654;EFF=INTRON(MODIFIER||||386|LOC_Os04g38340|protein_coding|CODING|LOC_Os04g38340.1|12|1) FN4160-S.SNP.4:22813511 chr04:022813511 0 W/22813511-22813511 FN4160-S SNP A -> C AC=2;AN=170;BQB=0.919466;DP=2602;DP4=1355,1163,11,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08137e-13;MQSB=0.969384;RPB=0.915031;SGB=105.627;VDB=0.632952;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.4:22818165 chr04:022818165 0 W/22818165-22818165 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.956568;DP=2918;DP4=1314,1507,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000166825;MQSB=0.999527;RPB=0.966418;SGB=30.5793;VDB=0.712541;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.4:22823605 chr04:022823605 0 W/22823605-22823605 FN4052-S SNP A -> G AC=2;AN=168;BQB=0.999835;DP=2303;DP4=1130,1019,18,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.56927e-22;MQSB=0.965551;RPB=0.887697;SGB=184.14;VDB=0.301478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.4:22824960 chr04:022824960 0 W/22824960-22824960 FN2278-S SNP G -> A AC=2;AN=190;BQB=0.954451;DP=4266;DP4=1785,2199,14,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41162e-21;MQSB=0.839208;RPB=0.999554;SGB=47.6197;VDB=0.56299;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.4:22824960 chr04:022824960 0 W/22824960-22824960 FN461-S Single Base Substitution G-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN_841-7-2.SNP.4:22827708 chr04:022827708 0 W/22827708-22827708 FN_841-7-2 Single Base Substitution G-T HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN858-S.SNP.4:22831446 chr04:022831446 0 W/22831446-22831446 FN858-S Single Base Substitution G-A INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN910-S.SNP.4:22841857 chr04:022841857 0 W/22841857-22841857 FN910-S Single Base Substitution C-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN1280-S.SNP.4:22843086 chr04:022843086 0 W/22843086-22843086 FN1280-S Single Base Substitution C-A INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1121-S.SNP.4:22849911 chr04:022849911 0 W/22849911-22849911 FN1121-S Single Base Substitution C-T INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2634-S.SNP.4:22850157 chr04:022850157 0 W/22850157-22850157 FN2634-S SNP A -> T AC=2;AN=200;BQB=0.82555;DP=4957;DP4=2399,2339,25,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.43081e-30;MQSB=0.994953;RPB=0.964436;SGB=125.876;VDB=0.980394;EFF=INTRON(MODIFIER||||267|LOC_Os04g38430|protein_coding|CODING|LOC_Os04g38430.1|3|1),INTRON(MODIFIER||||374|LOC_Os04g38430|protein_coding|CODING|LOC_Os04g38430.2|3|1) FN2242-S.SNP.4:22860739 chr04:022860739 0 W/22860739-22860739 FN2242-S SNP C -> G AC=1;AN=190;BQB=0.817067;DP=3105;DP4=1698,1017,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000644122;MQB=6.52889e-05;MQSB=0.0056682;RPB=0.868477;SGB=28.9929;VDB=0.502759;EFF=INTRON(MODIFIER||||574|LOC_Os04g38450|protein_coding|CODING|LOC_Os04g38450.1|1|1) FN1058-S.SNP.4:22861866 chr04:022861866 0 W/22861866-22861866 FN1058-S Single Base Substitution T-A INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2474.SNP.4:22875589 chr04:022875589 0 W/22875589-22875589 FN2474 SNP A -> G AC=1;AN=200;BQB=0.999968;DP=4892;DP4=2602,2028,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98762e-07;MQSB=0.924438;RPB=0.853485;SGB=29.4541;VDB=0.17485;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.4:22876638 chr04:022876638 0 W/22876638-22876638 FN-299 Single Base Substitution A-T INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1047-S.SNP.4:22887598 chr04:022887598 0 W/22887598-22887598 FN1047-S Single Base Substitution G-A INTRON HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1047-S.SNP.4:22887599 chr04:022887599 0 W/22887599-22887599 FN1047-S Single Base Substitution T-A INTRON HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1047-S.SNP.4:22887600 chr04:022887600 0 W/22887600-22887600 FN1047-S Single Base Substitution G-A INTRON HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2241-S.SNP.4:22888411 chr04:022888411 0 W/22888411-22888411 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.307244;DP=3489;DP4=1917,1320,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000286615;MQB=4.44959e-06;MQSB=0.099822;RPB=0.944839;SGB=71.8647;VDB=0.260103;EFF=INTRON(MODIFIER||||723|LOC_Os04g38525|protein_coding|CODING|LOC_Os04g38525.1|1|1),INTRAGENIC(MODIFIER|||||LOC_Os04g38520||CODING|||1) FN488-S.SNP.4:22903263 chr04:022903263 0 W/22903263-22903263 FN488-S Single Base Substitution G-T INTRON HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-298.SNP.4:22909708 chr04:022909708 0 W/22909708-22909708 FN-298 Single Base Substitution A-T INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2240-S.SNP.4:22909708 chr04:022909708 0 W/22909708-22909708 FN2240-S SNP A -> T AC=1;AN=190;BQB=0.182326;DP=4744;DP4=2085,2324,12,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.078e-10;MQSB=0.153147;RPB=0.183503;SGB=-108.329;VDB=0.00914099;EFF=INTRON(MODIFIER||||104|LOC_Os04g38550|protein_coding|CODING|LOC_Os04g38550.1|1|1) FN1468-S.SNP.4:22911599 chr04:022911599 0 W/22911599-22911599 FN1468-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os04g38560 pectinesterase, putative, expressed SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN3866-S.SNP.4:22915512 chr04:022915512 0 W/22915512-22915512 FN3866-S SNP G -> A AC=1;AN=158;BQB=0.91753;DP=2706;DP4=1396,1201,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.63172e-07;MQSB=0.965016;RPB=0.339643;SGB=42.6978;VDB=0.284215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1073V|1259|LOC_Os04g38570|protein_coding|CODING|LOC_Os04g38570.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A803V|989|LOC_Os04g38570|protein_coding|CODING|LOC_Os04g38570.2|9|1) FN1556-S.SNP.4:22920551 chr04:022920551 0 W/22920551-22920551 FN1556-S Single Base Substitution G-A INTRON HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN589-S.SNP.4:22922346 chr04:022922346 0 W/22922346-22922346 FN589-S Single Base Substitution C-T INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN_N1-150-1.SNP.4:22926957 chr04:022926957 0 W/22926957-22926957 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3983-S.SNP.4:22927526 chr04:022927526 0 W/22927526-22927526 FN3983-S SNP C -> T AC=1;AN=168;BQB=0.99522;DP=839;DP4=423,322,6,1;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00363232;MQSB=0.536641;RPB=0.115528;SGB=25.5891;VDB=0.185086;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.4:22938336 chr04:022938336 0 W/22938336-22938336 FN3368-S SNP C -> G AC=1;AN=184;BQB=0.992451;DP=3489;DP4=1563,1843,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.56784e-14;MQSB=0.95287;RPB=0.996679;SGB=107.526;VDB=0.808067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A291G|409|LOC_Os04g38600|protein_coding|CODING|LOC_Os04g38600.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A287G|405|LOC_Os04g38600|protein_coding|CODING|LOC_Os04g38600.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A284G|402|LOC_Os04g38600|protein_coding|CODING|LOC_Os04g38600.3|4|1),INTRON(MODIFIER||||140|LOC_Os04g38600|protein_coding|CODING|LOC_Os04g38600.4|3|1) FN760-S.SNP.4:22948944 chr04:022948944 0 W/22948944-22948944 FN760-S Single Base Substitution G-A INTRON HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1444-S.SNP.4:22949017 chr04:022949017 0 W/22949017-22949017 FN1444-S Single Base Substitution C-A INTRON HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN892-S.SNP.4:22953001 chr04:022953001 0 W/22953001-22953001 FN892-S Single Base Substitution G-A INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN987-S.SNP.4:22956885 chr04:022956885 0 W/22956885-22956885 FN987-S Single Base Substitution A-G INTRON HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2667-S.SNP.4:22957084 chr04:022957084 0 W/22957084-22957084 FN2667-S SNP A -> G AC=1;AN=200;BQB=0.891229;DP=4578;DP4=1845,2479,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.50676e-07;MQSB=0.412073;RPB=0.961639;SGB=7.88476;VDB=0.243468;EFF=INTRON(MODIFIER||||445|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.1|7|1),INTRON(MODIFIER||||390|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.2|7|1),INTRON(MODIFIER||||323|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.3|7|1) FN3517-S.SNP.4:22960340 chr04:022960340 0 W/22960340-22960340 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.824826;DP=2669;DP4=1428,1110,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000374672;MQB=0.000164899;MQSB=0.999894;RPB=0.983964;SGB=39.8925;VDB=0.15979;EFF=UTR_3_PRIME(MODIFIER||119||445|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.1|13|1),UTR_3_PRIME(MODIFIER||119||390|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.2|13|1),UTR_3_PRIME(MODIFIER||119||323|LOC_Os04g38640|protein_coding|CODING|LOC_Os04g38640.3|10|1) FN2128-S.SNP.4:22961260 chr04:022961260 0 W/22961260-22961260 FN2128-S SNP A -> G AC=1;AN=168;BQB=0.00228648;DP=3681;DP4=2101,1535,18,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.34598e-08;MQSB=0.994964;RPB=0.998288;SGB=-200.044;VDB=0.77969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.4:22965235 chr04:022965235 0 W/22965235-22965235 FN1173-S Single Base Substitution G-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN-134.SNP.4:22965552 chr04:022965552 0 W/22965552-22965552 FN-134 Single Base Substitution C-T INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN-134.SNP.4:22965554 chr04:022965554 0 W/22965554-22965554 FN-134 Single Base Substitution G-T INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2664-S.SNP.4:22966493 chr04:022966493 0 W/22966493-22966493 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.0898566;DP=5158;DP4=2462,2230,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7435e-10;MQSB=0.00194405;RPB=0.970126;SGB=-10.6896;VDB=0.955606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.4:22975886 chr04:022975886 0 W/22975886-22975886 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1030-S.SNP.4:22976953 chr04:022976953 0 W/22976953-22976953 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN899-S.SNP.4:22977879 chr04:022977879 0 W/22977879-22977879 FN899-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3834-S.SNP.4:22984498 chr04:022984498 0 W/22984498-22984498 FN3834-S SNP A -> T AC=1;AN=190;BQB=0.434436;DP=2809;DP4=1385,1277,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48845e-09;MQSB=0.956963;RPB=0.858268;SGB=38.983;VDB=0.273301;EFF=INTRON(MODIFIER||||224|LOC_Os04g38700|protein_coding|CODING|LOC_Os04g38700.1|1|1),INTRON(MODIFIER||||224|LOC_Os04g38700|protein_coding|CODING|LOC_Os04g38700.2|1|1) FN4110-S.SNP.4:22987748 chr04:022987748 0 W/22987748-22987748 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.720668;DP=2952;DP4=1296,1602,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.57412e-08;MQSB=0.979421;RPB=0.865068;SGB=66.6657;VDB=0.413935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S112L|224|LOC_Os04g38700|protein_coding|CODING|LOC_Os04g38700.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S112L|224|LOC_Os04g38700|protein_coding|CODING|LOC_Os04g38700.1|3|1) FN3819-S.SNP.4:22989329 chr04:022989329 0 W/22989329-22989329 FN3819-S SNP T -> A AC=2;AN=190;BQB=0.948698;DP=2523;DP4=1118,1324,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52349e-15;MQSB=0.999611;RPB=0.843687;SGB=78.7471;VDB=0.253381;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.4:22994029 chr04:022994029 0 W/22994029-22994029 FN4258-S SNP A -> T AC=1;AN=170;BQB=0.9514;DP=2136;DP4=1007,1035,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.85884e-07;MQSB=0.954912;RPB=0.967029;SGB=38.987;VDB=0.187503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.4:22999105 chr04:022999105 0 W/22999105-22999105 FN2212-S SNP G -> A AC=1;AN=190;BQB=0.952507;DP=4874;DP4=2220,2330,20,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.55248e-25;MQSB=0.991962;RPB=0.658826;SGB=100.276;VDB=0.879236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.4:23005480 chr04:023005480 0 W/23005480-23005480 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.52005;DP=5055;DP4=2560,2181,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.95983e-13;MQSB=0.810899;RPB=0.98213;SGB=42.5108;VDB=0.622983;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.4:23006981 chr04:023006981 0 W/23006981-23006981 FN4044-S SNP G -> A AC=2;AN=168;BQB=0.994444;DP=2713;DP4=1085,1484,11,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.22017e-17;MQSB=0.996476;RPB=0.898185;SGB=114.204;VDB=0.405126;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.4:23006985 chr04:023006985 0 W/23006985-23006985 FN4044-S SNP G -> A AC=2;AN=168;BQB=0.806548;DP=2737;DP4=1073,1526,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.08001e-20;MQSB=0.999172;RPB=0.780755;SGB=61.0778;VDB=0.471054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.4:23012428 chr04:023012428 0 W/23012428-23012428 FN2244-S SNP G -> A AC=1;AN=190;BQB=0.18203;DP=3443;DP4=1239,1870,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.92106e-05;MQSB=0.923721;RPB=0.764319;SGB=39.6545;VDB=0.94699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.4:23016275 chr04:023016275 0 W/23016275-23016275 FN1104-S Single Base Substitution A-G INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1721-S.SNP.4:23018922 chr04:023018922 0 W/23018922-23018922 FN1721-S SNP T -> A AC=1;AN=188;BQB=0.0427883;DP=3981;DP4=1981,1938,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71794e-07;MQSB=0.993362;RPB=0.979007;SGB=-61.9025;VDB=0.580132;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.4:23024048 chr04:023024048 0 W/23024048-23024048 FN1102-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN-333.SNP.4:23025669 chr04:023025669 0 W/23025669-23025669 FN-333 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN2729-S.SNP.4:23040975 chr04:023040975 0 W/23040975-23040975 FN2729-S SNP T -> G AC=1;AN=200;BQB=0.81722;DP=5081;DP4=2346,2535,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30431e-15;MQSB=0.516201;RPB=0.912451;SGB=52.9314;VDB=0.549786;EFF=INTRON(MODIFIER||||99|LOC_Os04g38770|protein_coding|CODING|LOC_Os04g38770.1|1|1) FN3368-S.SNP.4:23049031 chr04:023049031 0 W/23049031-23049031 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.82558;DP=3178;DP4=1627,1424,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19639e-09;MQSB=0.805632;RPB=0.95469;SGB=42.7914;VDB=0.549422;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.4:23053206 chr04:023053206 0 W/23053206-23053206 FN-397 Single Base Substitution A-T INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-202.SNP.4:23058873 chr04:023058873 0 W/23058873-23058873 FN-202 Single Base Substitution G-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2707-S.SNP.4:23060186 chr04:023060186 0 W/23060186-23060186 FN2707-S SNP C -> A AC=2;AN=200;BQB=0.999624;DP=4734;DP4=2340,2157,13,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.78687e-15;MQSB=0.971976;RPB=0.846491;SGB=87.1368;VDB=0.40188;EFF=INTRON(MODIFIER||||208|LOC_Os04g38790|protein_coding|CODING|LOC_Os04g38790.1|3|1) FN-202.SNP.4:23070062 chr04:023070062 0 W/23070062-23070062 FN-202 Single Base Substitution C-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN803-S.SNP.4:23093558 chr04:023093558 0 W/23093558-23093558 FN803-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g38840 LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1688-S.SNP.4:23095280 chr04:023095280 0 W/23095280-23095280 FN1688-S SNP C -> A AC=1;AN=188;BQB=0.461012;DP=3118;DP4=1136,1951,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.03269e-06;MQSB=0.997694;RPB=0.983938;SGB=-16.0863;VDB=0.315657;EFF=INTRON(MODIFIER||||285|LOC_Os04g38850|protein_coding|CODING|LOC_Os04g38850.1|1|1) FN1622-S.SNP.4:23095495 chr04:023095495 0 W/23095495-23095495 FN1622-S Single Base Substitution C-A INTRON Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1493-S.SNP.4:23103260 chr04:023103260 0 W/23103260-23103260 FN1493-S Single Base Substitution T-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1493-S.SNP.4:23103268 chr04:023103268 0 W/23103268-23103268 FN1493-S Single Base Substitution G-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3942-S.SNP.4:23119796 chr04:023119796 0 W/23119796-23119796 FN3942-S SNP G -> A AC=1;AN=168;BQB=0.911882;DP=2936;DP4=1531,1269,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.83696e-09;MQSB=0.926018;RPB=0.924749;SGB=38.1788;VDB=0.757462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.4:23119829 chr04:023119829 0 W/23119829-23119829 FN3810-S SNP C -> T AC=2;AN=190;BQB=0.993593;DP=3058;DP4=1617,1332,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.96515e-14;MQSB=0.991244;RPB=0.97395;SGB=94.6341;VDB=0.00295623;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.4:23131552 chr04:023131552 0 W/23131552-23131552 FN4016-S SNP T -> C AC=1;AN=168;BQB=0.968856;DP=2166;DP4=778,1224,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.79818e-08;MQSB=0.772137;RPB=0.561802;SGB=17.3231;VDB=0.7838;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.4:23133635 chr04:023133635 0 W/23133635-23133635 FN2273-S SNP G -> T AC=1;AN=190;BQB=0.97937;DP=5353;DP4=2464,2571,12,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11485e-21;MQSB=0.440593;RPB=0.878227;SGB=149.281;VDB=0.580485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.4:23133636 chr04:023133636 0 W/23133636-23133636 FN2273-S SNP C -> T AC=1;AN=190;BQB=0.541019;DP=5345;DP4=2470,2472,16,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29882e-22;MQSB=0.553423;RPB=0.662743;SGB=-1.59056;VDB=0.402019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN-107 Single Base Substitution C-A INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-374.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN-374 Single Base Substitution C-A INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1293-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN1293-S Single Base Substitution C-A INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1633-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN1633-S Single Base Substitution C-A INTERGENIC Homo SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3056-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN3056-S SNP C -> A AC=2;AN=184;BQB=0.995318;DP=3675;DP4=1644,1788,14,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.99154e-18;MQSB=0.753049;RPB=0.948342;SGB=76.2326;VDB=0.052336;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN3451-S SNP C -> A AC=2;AN=184;BQB=0.950749;DP=3442;DP4=1631,1635,10,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000290529;MQB=1.563e-15;MQSB=0.979044;RPB=0.96601;SGB=61.1019;VDB=0.245727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN3525-S SNP C -> A AC=1;AN=188;BQB=0.921213;DP=3405;DP4=1623,1626,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.17121e-09;MQSB=0.672619;RPB=0.890135;SGB=39.5276;VDB=0.730398;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.4:23144813 chr04:023144813 0 W/23144813-23144813 FN4253-S SNP C -> A AC=2;AN=170;BQB=0.994324;DP=2923;DP4=1276,1474,12,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.29244e-18;MQSB=0.959866;RPB=0.731228;SGB=63.8516;VDB=0.184152;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.4:23150341 chr04:023150341 0 W/23150341-23150341 FN1268-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g38970 protein binding protein, putative, expressed SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3561-S.SNP.4:23150509 chr04:023150509 0 W/23150509-23150509 FN3561-S SNP G -> A AC=2;AN=188;BQB=0.963573;DP=2818;DP4=1323,1388,20,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.26843e-25;MQSB=0.91742;RPB=0.807247;SGB=174.468;VDB=0.869506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T221I|327|LOC_Os04g38970|protein_coding|CODING|LOC_Os04g38970.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T221I|327|LOC_Os04g38970|protein_coding|CODING|LOC_Os04g38970.1|3|1) FN2681-S.SNP.4:23152232 chr04:023152232 0 W/23152232-23152232 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.901612;DP=5077;DP4=2458,2326,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32302e-16;MQSB=0.858392;RPB=0.840565;SGB=123.342;VDB=0.973695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.4:23167294 chr04:023167294 0 W/23167294-23167294 FN3990-S SNP A -> G AC=1;AN=168;BQB=0.993473;DP=2792;DP4=1455,1136,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.61481e-09;MQSB=0.9788;RPB=0.995067;SGB=24.6155;VDB=0.982218;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.4:23171086 chr04:023171086 0 W/23171086-23171086 FN561-S Single Base Substitution C-T INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN883-S.SNP.4:23179747 chr04:023179747 0 W/23179747-23179747 FN883-S Single Base Substitution T-G INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1689-S.SNP.4:23194148 chr04:023194148 0 W/23194148-23194148 FN1689-S SNP C -> T AC=1;AN=188;BQB=0.441019;DP=2810;DP4=1519,1240,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30058e-09;MQSB=0.991726;RPB=0.558095;SGB=36.2493;VDB=0.232344;EFF=INTERGENIC(MODIFIER||||||||||1) FN1741-S.SNP.4:23200508 chr04:023200508 0 W/23200508-23200508 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.400066;DP=2943;DP4=1697,1188,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000350809;MQSB=0.961123;RPB=0.640807;SGB=-34.6243;VDB=0.605471;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.4:23200977 chr04:023200977 0 W/23200977-23200977 FN3701-S SNP G -> A AC=1;AN=190;BQB=0.585863;DP=2472;DP4=1024,1272,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51552e-06;MQSB=0.999739;RPB=0.495863;SGB=28.7675;VDB=0.119656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.4:23202197 chr04:023202197 0 W/23202197-23202197 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.777312;DP=2464;DP4=1162,1226,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0477e-06;MQSB=0.998513;RPB=0.9644;SGB=21.8853;VDB=0.236034;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.4:23203985 chr04:023203985 0 W/23203985-23203985 FN417-S Single Base Substitution A-G INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2608-S.SNP.4:23205270 chr04:023205270 0 W/23205270-23205270 FN2608-S SNP C -> T AC=2;AN=198;BQB=0.999787;DP=3822;DP4=1784,1837,6,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.82043e-09;MQSB=0.279491;RPB=0.811782;SGB=47.3393;VDB=0.207427;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.4:23205912 chr04:023205912 0 W/23205912-23205912 FN910-S Single Base Substitution A-C INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3983-S.SNP.4:23211286 chr04:023211286 0 W/23211286-23211286 FN3983-S SNP C -> T AC=2;AN=168;BQB=0.999636;DP=2525;DP4=1277,1132,13,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.00629e-13;MQSB=0.815921;RPB=0.942498;SGB=69.0561;VDB=0.798301;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.4:23215951 chr04:023215951 0 W/23215951-23215951 FN711-S Single Base Substitution C-T INTRON HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. W481-5-1.SNP.4:23218548 chr04:023218548 0 W/23218548-23218548 W481-5-1 Single Base Substitution T-G INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2146-S.SNP.4:23218693 chr04:023218693 0 W/23218693-23218693 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.00013966;DP=3386;DP4=2235,1103,19,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23623e-06;MQSB=0.238257;RPB=0.707075;SGB=-402.297;VDB=0.784807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.4:23222663 chr04:023222663 0 W/23222663-23222663 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.69325;DP=2640;DP4=1128,1377,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93494e-06;MQSB=0.0699485;RPB=0.878635;SGB=39.2697;VDB=0.95063;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.4:23231486 chr04:023231486 0 W/23231486-23231486 FN814-S Single Base Substitution T-A INTRON HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1760-S.SNP.4:23237449 chr04:023237449 0 W/23237449-23237449 FN1760-S SNP T -> C AC=1;AN=188;BQB=0.0690575;DP=2529;DP4=1525,969,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000457843;MQSB=0.993661;RPB=0.935393;SGB=-34.6243;VDB=0.576633;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.4:23240058 chr04:023240058 0 W/23240058-23240058 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN-255.SNP.4:23249415 chr04:023249415 0 W/23249415-23249415 FN-255 Single Base Substitution C-A INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN3653-S.SNP.4:23250737 chr04:023250737 0 W/23250737-23250737 FN3653-S SNP C -> A AC=1;AN=190;BQB=0.53397;DP=3237;DP4=1506,1645,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.3501e-06;MQSB=0.992248;RPB=0.678784;SGB=15.9981;VDB=0.626032;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.4:23251351 chr04:023251351 0 W/23251351-23251351 FN-377 Single Base Substitution G-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN2529-S.SNP.4:23252405 chr04:023252405 0 W/23252405-23252405 FN2529-S SNP G -> A AC=2;AN=198;BQB=0.998674;DP=3242;DP4=1414,1620,16,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.38357e-22;MQSB=0.922182;RPB=0.813976;SGB=49.2274;VDB=0.0808988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.4:23256065 chr04:023256065 0 W/23256065-23256065 FN3811-S SNP G -> T AC=1;AN=190;BQB=0.951506;DP=2603;DP4=1193,1306,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.6864e-07;MQSB=0.977263;RPB=0.888466;SGB=32.5467;VDB=0.980758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.4:23265532 chr04:023265532 0 W/23265532-23265532 FN2547-S SNP C -> T AC=1;AN=198;BQB=0.976116;DP=4189;DP4=2139,1857,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.07832e-07;MQSB=0.875367;RPB=0.2993;SGB=13.7737;VDB=0.363216;EFF=INTERGENIC(MODIFIER||||||||||1) FN-193.SNP.4:23277880 chr04:023277880 0 W/23277880-23277880 FN-193 Single Base Substitution A-G INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2440.SNP.4:23281883 chr04:023281883 0 W/23281883-23281883 FN2440 SNP G -> A AC=1;AN=200;BQB=0.0998674;DP=3320;DP4=1309,1696,2,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00180723;MQB=0.0227781;MQSB=8.45026e-06;RPB=0.969867;SGB=36.6644;VDB=0.510906;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.4:23283993 chr04:023283993 0 W/23283993-23283993 FN1473-S Single Base Substitution A-G INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN-111.SNP.4:23284027 chr04:023284027 0 W/23284027-23284027 FN-111 Single Base Substitution T-C INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN2385.SNP.4:23288394 chr04:023288394 0 W/23288394-23288394 FN2385 SNP C -> T AC=2;AN=192;BQB=0.95886;DP=4672;DP4=2292,2037,32,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.49326e-32;MQSB=0.968729;RPB=0.180484;SGB=84.0079;VDB=0.580456;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L829|1136|LOC_Os04g39160|protein_coding|CODING|LOC_Os04g39160.1|3|1) FN1519-S.SNP.4:23294886 chr04:023294886 0 W/23294886-23294886 FN1519-S Single Base Substitution T-A INTRON HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN-228.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN-228 Single Base Substitution A-T INTRON HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2308.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN2308 SNP A -> T AC=1;AN=192;BQB=0.768627;DP=4734;DP4=2547,1901,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.07628e-08;MQSB=0.0366147;RPB=0.205056;SGB=50.4731;VDB=0.0388187;EFF=INTRON(MODIFIER||||425|LOC_Os04g39180|protein_coding|CODING|LOC_Os04g39180.1|1|1) FN2713-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN2713-S SNP A -> T AC=2;AN=200;BQB=0.927571;DP=4455;DP4=2371,1823,28,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.53689e-25;MQSB=0.0519908;RPB=0.970294;SGB=6.86038;VDB=0.296367;EFF=INTRON(MODIFIER||||425|LOC_Os04g39180|protein_coding|CODING|LOC_Os04g39180.1|1|1) FN3310-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN3310-S SNP A -> T AC=1;AN=184;BQB=0.998243;DP=2619;DP4=1270,1175,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75179e-07;MQSB=0.990833;RPB=0.999354;SGB=-13.1487;VDB=0.772379;EFF=INTRON(MODIFIER||||425|LOC_Os04g39180|protein_coding|CODING|LOC_Os04g39180.1|1|1) FN3632-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN3632-S SNP A -> T AC=2;AN=190;BQB=0.999763;DP=2781;DP4=1324,1257,26,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.0824e-19;MQSB=0.99894;RPB=0.985505;SGB=78.6354;VDB=0.989481;EFF=INTRON(MODIFIER||||425|LOC_Os04g39180|protein_coding|CODING|LOC_Os04g39180.1|1|1) FN4119-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN4119-S SNP A -> T AC=2;AN=182;BQB=0.874963;DP=2632;DP4=1319,1173,4,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.67966e-08;MQSB=0.940436;RPB=0.395749;SGB=8.17132;VDB=0.158996;EFF=INTRON(MODIFIER||||425|LOC_Os04g39180|protein_coding|CODING|LOC_Os04g39180.1|1|1) FN483-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN483-S Single Base Substitution A-T INTRON HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN845-S.SNP.4:23297364 chr04:023297364 0 W/23297364-23297364 FN845-S Single Base Substitution A-T INTRON HOMO SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN1679-S.SNP.4:23304507 chr04:023304507 0 W/23304507-23304507 FN1679-S SNP C -> A AC=2;AN=188;BQB=0.50759;DP=3688;DP4=1671,1939,26,35;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.39121e-28;MQSB=0.997342;RPB=0.230173;SGB=125.957;VDB=0.818229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.4:23311864 chr04:023311864 0 W/23311864-23311864 FN3687-S SNP G -> C AC=1;AN=190;BQB=0.890003;DP=2763;DP4=1381,1278,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43476e-08;MQSB=0.996865;RPB=0.993115;SGB=23.6597;VDB=0.391784;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.4:23321486 chr04:023321486 0 W/23321486-23321486 FN944-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g39220 expressed protein SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2417.SNP.4:23333370 chr04:023333370 0 W/23333370-23333370 FN2417 SNP A -> G AC=1;AN=200;BQB=0.431677;DP=4638;DP4=2198,2157,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.27531e-13;MQSB=0.942145;RPB=0.26525;SGB=69.1109;VDB=0.859416;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N290|663|LOC_Os04g39240|protein_coding|CODING|LOC_Os04g39240.1|4|1) FN-163.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN-163 Single Base Substitution G-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-272.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN-272 Single Base Substitution G-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1557-S.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN1557-S Single Base Substitution G-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2205-S.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN2205-S SNP G -> T AC=2;AN=190;BQB=0.88602;DP=4672;DP4=2288,2037,23,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.14196e-26;MQSB=0.997422;RPB=0.783282;SGB=63.1584;VDB=0.639813;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN497-S Single Base Substitution G-T INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN548-S.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN548-S Single Base Substitution G-T INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN895-S.SNP.4:23338071 chr04:023338071 0 W/23338071-23338071 FN895-S Single Base Substitution G-T INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN-137.SNP.4:23350689 chr04:023350689 0 W/23350689-23350689 FN-137 Single Base Substitution G-C INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3720-S.SNP.4:23356274 chr04:023356274 0 W/23356274-23356274 FN3720-S SNP G -> C AC=1;AN=190;BQB=0.555439;DP=2696;DP4=1403,1087,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000631717;MQSB=0.947402;RPB=0.9659;SGB=28.9929;VDB=0.100284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.4:23365109 chr04:023365109 0 W/23365109-23365109 FN1045-S Single Base Substitution A-G INTRON HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2112-S.SNP.4:23367229 chr04:023367229 0 W/23367229-23367229 FN2112-S SNP A -> G AC=1;AN=168;BQB=0.743912;DP=4075;DP4=1968,2066,12,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43485e-12;MQSB=0.895627;RPB=0.65848;SGB=24.2221;VDB=0.882757;EFF=UTR_3_PRIME(MODIFIER||205||268|LOC_Os04g39280|protein_coding|CODING|LOC_Os04g39280.2|7|1) FN997-S.SNP.4:23374545 chr04:023374545 0 W/23374545-23374545 FN997-S Single Base Substitution G-T INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN-159.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN-159 Single Base Substitution G-A INTERGENIC HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN-73.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN-73 Single Base Substitution G-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1480-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN1480-S Single Base Substitution G-A INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1723-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.967454;DP=3743;DP4=1785,1901,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.85577e-13;MQSB=0.999739;RPB=0.977554;SGB=46.4225;VDB=0.919007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN2149-S SNP G -> A AC=2;AN=168;BQB=0.827721;DP=3848;DP4=1877,1901,22,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.97932e-14;MQSB=0.967447;RPB=0.947416;SGB=-46.3351;VDB=0.939546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN2322 SNP G -> A AC=2;AN=192;BQB=0.418859;DP=5764;DP4=2432,2834,18,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.36998e-23;MQSB=0.920279;RPB=0.999824;SGB=-0.659969;VDB=0.504342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN2675-S SNP G -> A AC=2;AN=200;BQB=0.331223;DP=5651;DP4=2546,2715,25,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.87631e-26;MQSB=0.968815;RPB=0.962012;SGB=110.245;VDB=0.440295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.993304;DP=3893;DP4=1671,1976,17,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.01376e-17;MQSB=0.992968;RPB=0.632347;SGB=32.6727;VDB=0.619972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN3797-S SNP G -> A AC=2;AN=190;BQB=0.936461;DP=3804;DP4=1644,1930,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.58469e-16;MQSB=0.998591;RPB=0.723496;SGB=108.296;VDB=0.802683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN3948-S SNP G -> A AC=2;AN=168;BQB=0.602881;DP=3575;DP4=1565,1731,33,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.24078e-33;MQSB=0.688266;RPB=0.57537;SGB=185.704;VDB=0.767182;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN564-S Single Base Substitution G-A INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN928-S.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 FN928-S Single Base Substitution G-A INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. W598-2-1.SNP.4:23381239 chr04:023381239 0 W/23381239-23381239 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN496-S.SNP.4:23381738 chr04:023381738 0 W/23381738-23381738 FN496-S Single Base Substitution G-A INTERGENIC HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3964-S.SNP.4:23382527 chr04:023382527 0 W/23382527-23382527 FN3964-S SNP T -> C AC=1;AN=168;BQB=0.991481;DP=2187;DP4=884,1031,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.74731e-06;MQSB=0.991076;RPB=0.560751;SGB=21.0249;VDB=0.133454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T136A|222|LOC_Os04g39290|protein_coding|CODING|LOC_Os04g39290.1|2|1) FN_815-4-1.SNP.4:23388370 chr04:023388370 0 W/23388370-23388370 FN_815-4-1 Single Base Substitution A-G Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN4206-S.SNP.4:23390513 chr04:023390513 0 W/23390513-23390513 FN4206-S SNP C -> G AC=2;AN=170;BQB=0.959312;DP=2351;DP4=1194,1009,11,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.18018e-13;MQSB=0.853736;RPB=0.912041;SGB=114.512;VDB=0.664492;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.4:23391208 chr04:023391208 0 W/23391208-23391208 FN-293 Single Base Substitution A-T INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2378.SNP.4:23394592 chr04:023394592 0 W/23394592-23394592 FN2378 SNP A -> T AC=1;AN=192;BQB=0.895772;DP=4974;DP4=2235,2168,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.11068e-15;MQSB=0.993146;RPB=0.656374;SGB=57.1218;VDB=0.121294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.4:23398861 chr04:023398861 0 W/23398861-23398861 FN2360 SNP G -> A AC=2;AN=192;BQB=0.975155;DP=4479;DP4=2107,1812,12,7;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.00223264;MQB=3.98752e-10;MQSB=0.673543;RPB=0.609275;SGB=81.1609;VDB=0.530407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.4:23405101 chr04:023405101 0 W/23405101-23405101 FN2469 SNP C -> T AC=1;AN=200;BQB=0.168498;DP=4793;DP4=2416,2096,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19733e-13;MQSB=0.989717;RPB=0.994887;SGB=52.9314;VDB=0.880901;EFF=INTRON(MODIFIER||||149|LOC_Os04g39310|protein_coding|CODING|LOC_Os04g39310.1|1|1) FN2201-S.SNP.4:23413937 chr04:023413937 0 W/23413937-23413937 FN2201-S SNP T -> G AC=1;AN=190;BQB=0.623209;DP=4166;DP4=1667,2146,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.44513e-06;MQSB=0.656367;RPB=0.315436;SGB=-15.4375;VDB=0.806376;EFF=INTRON(MODIFIER||||176|LOC_Os04g39330|protein_coding|CODING|LOC_Os04g39330.1|1|1) FN852-S.SNP.4:23414184 chr04:023414184 0 W/23414184-23414184 FN852-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2380.SNP.4:23417543 chr04:023417543 0 W/23417543-23417543 FN2380 SNP A -> G AC=1;AN=192;BQB=0.325475;DP=4823;DP4=2268,2256,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.25278e-10;MQSB=0.996504;RPB=0.854555;SGB=-10.2539;VDB=0.826386;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.4:23418486 chr04:023418486 0 W/23418486-23418486 FN-410 Single Base Substitution A-G INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN1030-S.SNP.4:23418908 chr04:023418908 0 W/23418908-23418908 FN1030-S Single Base Substitution C-G INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN3981-S.SNP.4:23420760 chr04:023420760 0 W/23420760-23420760 FN3981-S SNP C -> T AC=1;AN=168;BQB=0.419779;DP=2596;DP4=1275,1194,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00624588;MQSB=0.857245;RPB=0.054006;SGB=7.59999;VDB=0.0375418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.4:23424177 chr04:023424177 0 W/23424177-23424177 FN3064-S SNP T -> A AC=1;AN=184;BQB=0.956122;DP=3538;DP4=1739,1281,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=2.88031e-12;MQSB=0.0458267;RPB=0.922021;SGB=11.3677;VDB=0.0302145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.4:23427262 chr04:023427262 0 W/23427262-23427262 FN3373-S SNP T -> A AC=2;AN=184;BQB=0.989969;DP=2602;DP4=1356,1139,21,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00038432;MQB=1.73082e-18;MQSB=0.89921;RPB=0.479018;SGB=143.7;VDB=0.881623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.4:23430193 chr04:023430193 0 W/23430193-23430193 FN3568-S SNP C -> A AC=1;AN=188;BQB=0.971;DP=2722;DP4=1450,1211,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.36878e-05;MQSB=0.987169;RPB=0.559488;SGB=30.8063;VDB=0.0124389;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S132I|146|LOC_Os04g39370|protein_coding|CODING|LOC_Os04g39370.1|3|1) FN-210.SNP.4:23438717 chr04:023438717 0 W/23438717-23438717 FN-210 Single Base Substitution A-G INTERGENIC HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN448-S.SNP.4:23439474 chr04:023439474 0 W/23439474-23439474 FN448-S Single Base Substitution T-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3522-S.SNP.4:23445417 chr04:023445417 0 W/23445417-23445417 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.346509;DP=2567;DP4=1513,967,8,19;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0307752;MQB=2.65435e-11;MQSB=0.0812722;RPB=0.252632;SGB=-72.0994;VDB=0.0370624;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.4:23449414 chr04:023449414 0 W/23449414-23449414 FN360-S Single Base Substitution A-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3857-S.SNP.4:23450822 chr04:023450822 0 W/23450822-23450822 FN3857-S SNP C -> T AC=2;AN=158;BQB=0.716485;DP=2483;DP4=1227,1168,11,10;HOB=0.024996;ICB=0.493752;MQ=22;MQ0F=0.185663;MQB=0.134412;MQSB=0;RPB=0.0733688;SGB=86.3921;VDB=0.804106;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1768T|2027|LOC_Os04g39400|protein_coding|CODING|LOC_Os04g39400.1|2|1) FN2715-S.SNP.4:23452239 chr04:023452239 0 W/23452239-23452239 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.948142;DP=4782;DP4=2420,2136,10,9;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.13739;MQB=0.160046;MQSB=3.2676e-06;RPB=0.543248;SGB=81.8956;VDB=0.544441;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1295|2027|LOC_Os04g39400|protein_coding|CODING|LOC_Os04g39400.1|2|1) FN2223-S.SNP.4:23458096 chr04:023458096 0 W/23458096-23458096 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.319892;DP=4733;DP4=1972,2372,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000211282;MQB=5.47089e-08;MQSB=0.92804;RPB=0.121856;SGB=7.21887;VDB=0.338591;EFF=UTR_3_PRIME(MODIFIER||327||950|LOC_Os04g39410|protein_coding|CODING|LOC_Os04g39410.1|1|1) FN969-S.SNP.4:23483936 chr04:023483936 0 W/23483936-23483936 FN969-S Single Base Substitution C-T INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN1268-S.SNP.4:23486852 chr04:023486852 0 W/23486852-23486852 FN1268-S Single Base Substitution T-G INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN-131.SNP.4:23493708 chr04:023493708 0 W/23493708-23493708 FN-131 Single Base Substitution C-T INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN260-S.SNP.4:23494542 chr04:023494542 0 W/23494542-23494542 FN260-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3674-S.SNP.4:23495439 chr04:023495439 0 W/23495439-23495439 FN3674-S SNP G -> A AC=1;AN=190;BQB=0.958225;DP=2866;DP4=1214,1532,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07071e-05;MQSB=0.961635;RPB=0.62204;SGB=21.8853;VDB=0.787088;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.4:23513122 chr04:023513122 0 W/23513122-23513122 FN4075-S SNP A -> T AC=1;AN=182;BQB=0.862874;DP=3529;DP4=1812,1493,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.00479e-08;MQSB=0.978818;RPB=0.997335;SGB=46.1603;VDB=0.668172;EFF=UTR_3_PRIME(MODIFIER||36||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|7|1) FN3802-S.SNP.4:23518009 chr04:023518009 0 W/23518009-23518009 FN3802-S SNP T -> A AC=1;AN=190;BQB=0.843692;DP=2845;DP4=1345,1292,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30617e-06;MQSB=0.995956;RPB=0.999884;SGB=36.1006;VDB=0.469713;EFF=INTRON(MODIFIER||||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|3|1),INTRON(MODIFIER||||229|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.2|3|1) FN4041-S.SNP.4:23519536 chr04:023519536 0 W/23519536-23519536 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.148063;DP=2813;DP4=1428,1260,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.2702e-05;MQSB=0.390976;RPB=0.745312;SGB=14.8923;VDB=0.972449;EFF=INTRON(MODIFIER||||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|3|1),INTRON(MODIFIER||||229|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.2|3|1) FN2092-S.SNP.4:23520507 chr04:023520507 0 W/23520507-23520507 FN2092-S SNP G -> T AC=1;AN=168;BQB=8.77286e-05;DP=4080;DP4=1925,2115,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.99887e-07;MQSB=0.986001;RPB=0.991794;SGB=-218.331;VDB=0.996654;EFF=INTRON(MODIFIER||||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|2|1),INTRON(MODIFIER||||229|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.2|2|1) FN2596-S.SNP.4:23521757 chr04:023521757 0 W/23521757-23521757 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.721547;DP=3938;DP4=2113,1642,10,16;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000253936;MQB=4.15357e-14;MQSB=0.979074;RPB=0.996859;SGB=52.7004;VDB=0.129429;EFF=INTRON(MODIFIER||||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|2|1),INTRON(MODIFIER||||229|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.2|2|1) FN2596-S.SNP.4:23521758 chr04:023521758 0 W/23521758-23521758 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.305398;DP=3945;DP4=2070,1644,10,15;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000253485;MQB=1.4348e-11;MQSB=0.582074;RPB=0.580437;SGB=79.6954;VDB=0.24137;EFF=INTRON(MODIFIER||||466|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.1|2|1),INTRON(MODIFIER||||229|LOC_Os04g39489|protein_coding|CODING|LOC_Os04g39489.2|2|1) FN2553-S.SNP.4:23524604 chr04:023524604 0 W/23524604-23524604 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.995517;DP=3712;DP4=1798,1725,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.96672e-09;MQSB=0.899204;RPB=0.922374;SGB=7.75428;VDB=0.429535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G137E|358|LOC_Os04g39510|protein_coding|CODING|LOC_Os04g39510.1|1|1) FN962-S.SNP.4:23527673 chr04:023527673 0 W/23527673-23527673 FN962-S Single Base Substitution G-C INTRON HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1023-S.SNP.4:23533278 chr04:023533278 0 W/23533278-23533278 FN1023-S Single Base Substitution G-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN819-S.SNP.4:23547677 chr04:023547677 0 W/23547677-23547677 FN819-S Single Base Substitution A-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN-381.SNP.4:23553981 chr04:023553981 0 W/23553981-23553981 FN-381 Single Base Substitution A-T UTR_3_PRIME HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN-381.SNP.4:23553982 chr04:023553982 0 W/23553982-23553982 FN-381 Single Base Substitution G-T UTR_3_PRIME HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2411.SNP.4:23564109 chr04:023564109 0 W/23564109-23564109 FN2411 SNP A -> T AC=2;AN=200;BQB=0.917144;DP=4931;DP4=2231,2426,29,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32528e-37;MQSB=0.934646;RPB=0.8871;SGB=159.743;VDB=0.564821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.4:23571834 chr04:023571834 0 W/23571834-23571834 FN1096-S Single Base Substitution G-T INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN-160.SNP.4:23573629 chr04:023573629 0 W/23573629-23573629 FN-160 Single Base Substitution T-C INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN4047-S.SNP.4:23582279 chr04:023582279 0 W/23582279-23582279 FN4047-S SNP G -> A AC=1;AN=168;BQB=0.740928;DP=2251;DP4=1128,1041,2,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.19353e-05;MQSB=0.846411;RPB=0.909408;SGB=34.4498;VDB=0.405153;EFF=SPLICE_SITE_REGION(LOW||||998|LOC_Os04g39570|protein_coding|CODING|LOC_Os04g39570.1|7|1),SPLICE_SITE_REGION(LOW||||783|LOC_Os04g39570|protein_coding|CODING|LOC_Os04g39570.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G383|998|LOC_Os04g39570|protein_coding|CODING|LOC_Os04g39570.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G150|783|LOC_Os04g39570|protein_coding|CODING|LOC_Os04g39570.2|2|1) FN3844-S.SNP.4:23586670 chr04:023586670 0 W/23586670-23586670 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.983638;DP=2160;DP4=1100,952,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31873e-05;MQSB=0.986395;RPB=0.90142;SGB=18.3316;VDB=0.0576189;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T152M|998|LOC_Os04g39570|protein_coding|CODING|LOC_Os04g39570.1|2|1) FN-62.SNP.4:23590517 chr04:023590517 0 W/23590517-23590517 FN-62 Single Base Substitution C-T INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1184-S.SNP.4:23590517 chr04:023590517 0 W/23590517-23590517 FN1184-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1570-S.SNP.4:23590517 chr04:023590517 0 W/23590517-23590517 FN1570-S Single Base Substitution C-T INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2602-S.SNP.4:23590517 chr04:023590517 0 W/23590517-23590517 FN2602-S SNP C -> T AC=2;AN=198;BQB=0.0181575;DP=4559;DP4=2145,1959,16,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.51392e-16;MQSB=0.40506;RPB=0.66189;SGB=83.2905;VDB=0.019701;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.4:23590517 chr04:023590517 0 W/23590517-23590517 FN3910-S SNP C -> T AC=1;AN=158;BQB=0.746333;DP=2669;DP4=1294,1248,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.43676e-05;MQSB=0.991303;RPB=0.997002;SGB=30.704;VDB=0.429681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.4:23590704 chr04:023590704 0 W/23590704-23590704 FN1134-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN1112-S.SNP.4:23594346 chr04:023594346 0 W/23594346-23594346 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3714-S.SNP.4:23596210 chr04:023596210 0 W/23596210-23596210 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.384714;DP=3457;DP4=1579,1742,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.16557e-09;MQSB=0.701529;RPB=0.49933;SGB=26.2136;VDB=0.98931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.4:23601561 chr04:023601561 0 W/23601561-23601561 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN-63.SNP.4:23604588 chr04:023604588 0 W/23604588-23604588 FN-63 Single Base Substitution A-T INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2492.SNP.4:23606028 chr04:023606028 0 W/23606028-23606028 FN2492 SNP T -> C AC=1;AN=200;BQB=0.840743;DP=5357;DP4=2378,2609,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.22913e-16;MQSB=0.958732;RPB=0.665986;SGB=58.1418;VDB=0.947235;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.4:23606810 chr04:023606810 0 W/23606810-23606810 FN671-S Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN863-S.SNP.4:23610392 chr04:023610392 0 W/23610392-23610392 FN863-S Single Base Substitution A-G INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN-155.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN-155 Single Base Substitution G-T INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-164.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN-164 Single Base Substitution G-T INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-231.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN-231 Single Base Substitution G-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN-243 Single Base Substitution G-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-96.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN-96 Single Base Substitution G-T INTERGENIC HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN1414-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN1414-S Single Base Substitution G-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1559-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN1559-S Single Base Substitution G-T INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2141-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN2141-S SNP G -> T AC=2;AN=168;BQB=0.000119185;DP=4235;DP4=2067,2097,29,26;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.38036e-12;MQSB=8.28071e-05;RPB=0.812923;SGB=-534.256;VDB=0.0781477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN2254-S SNP G -> T AC=1;AN=190;BQB=0.371405;DP=5072;DP4=2477,2122,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00128191;MQSB=4.58715e-09;RPB=0.767606;SGB=-37.2167;VDB=0.659919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN2342 SNP G -> T AC=2;AN=192;BQB=0.172641;DP=5329;DP4=2576,2257,17,17;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=4.78224e-09;MQSB=6.4887e-07;RPB=0.867169;SGB=-4.61041;VDB=0.371551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN3484-S SNP G -> T AC=2;AN=184;BQB=0.765868;DP=2659;DP4=1204,1232,17,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.87714e-08;MQSB=2.20213e-06;RPB=0.948847;SGB=121.091;VDB=0.884841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN3866-S SNP G -> T AC=1;AN=158;BQB=0.997411;DP=2552;DP4=1182,1189,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=3.95326e-06;MQSB=3.7179e-06;RPB=0.734927;SGB=40.8124;VDB=0.838624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN3950-S SNP G -> T AC=1;AN=168;BQB=0.882943;DP=2782;DP4=1345,1219,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.52401e-07;MQSB=2.5657e-05;RPB=0.890655;SGB=75.9177;VDB=0.0583679;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN4208-S SNP G -> T AC=2;AN=170;BQB=0.687912;DP=2260;DP4=945,1151,11,7;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=2.52116e-05;MQSB=0.00555919;RPB=0.809192;SGB=74.528;VDB=0.941939;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN460-S Single Base Substitution G-T INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN724-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN724-S Single Base Substitution G-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN798-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN798-S Single Base Substitution G-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN873-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN873-S Single Base Substitution G-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN932-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN932-S Single Base Substitution G-T INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN961-S.SNP.4:23624265 chr04:023624265 0 W/23624265-23624265 FN961-S Single Base Substitution G-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-98.SNP.4:23633406 chr04:023633406 0 W/23633406-23633406 FN-98 Single Base Substitution G-A INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1583-S.SNP.4:23645942 chr04:023645942 0 W/23645942-23645942 FN1583-S Single Base Substitution T-C INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2125-S.SNP.4:23657729 chr04:023657729 0 W/23657729-23657729 FN2125-S SNP G -> A AC=1;AN=168;BQB=0.0664435;DP=3760;DP4=1374,2329,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.30266;MQB=0.915414;MQSB=0;RPB=0.18237;SGB=-66.4989;VDB=0.431738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.4:23658453 chr04:023658453 0 W/23658453-23658453 FN2458 SNP G -> A AC=1;AN=200;BQB=0.963053;DP=8882;DP4=5728,2568,8,6;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.446071;MQB=0.332699;MQSB=0;RPB=0.0638895;SGB=21.6694;VDB=0.15051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1674-S.SNP.4:23664046 chr04:023664046 0 W/23664046-23664046 FN1674-S SNP C -> T AC=2;AN=188;BQB=0.169155;DP=1893;DP4=987,868,8,5;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00633914;MQB=7.17367e-05;MQSB=0.817387;RPB=0.1359;SGB=18.4463;VDB=0.292287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.4:23665718 chr04:023665718 0 W/23665718-23665718 FN-238 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-87.SNP.4:23665718 chr04:023665718 0 W/23665718-23665718 FN-87 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN666-S.SNP.4:23665718 chr04:023665718 0 W/23665718-23665718 FN666-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2297.SNP.4:23666956 chr04:023666956 0 W/23666956-23666956 FN2297 SNP T -> A AC=1;AN=192;BQB=0.999767;DP=4607;DP4=2178,2102,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000217061;MQB=2.26408e-08;MQSB=0.997421;RPB=0.997113;SGB=34.0426;VDB=0.543168;EFF=INTRON(MODIFIER||||1282|LOC_Os04g39710|protein_coding|CODING|LOC_Os04g39710.1|4|1) FN2184-S.SNP.4:23668262 chr04:023668262 0 W/23668262-23668262 FN2184-S SNP T -> C AC=1;AN=190;BQB=0.997302;DP=4659;DP4=2184,1902,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000214638;MQB=4.13002e-12;MQSB=0.669091;RPB=0.654791;SGB=-11.0065;VDB=0.215811;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L1035P|1282|LOC_Os04g39710|protein_coding|CODING|LOC_Os04g39710.1|6|1) FN3355-S.SNP.4:23671027 chr04:023671027 0 W/23671027-23671027 FN3355-S SNP T -> C AC=1;AN=184;BQB=0.978212;DP=3715;DP4=1761,1681,19,3;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.159354;MQB=0.659384;MQSB=1.87966e-08;RPB=0.971548;SGB=93.9603;VDB=0.46948;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M106T|974|LOC_Os04g39720|protein_coding|CODING|LOC_Os04g39720.1|1|1) FN3345-S.SNP.4:23671412 chr04:023671412 0 W/23671412-23671412 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.951812;DP=3237;DP4=1460,1688,5,17;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0676552;MQB=0.366718;MQSB=8.88483e-06;RPB=0.443396;SGB=14.4113;VDB=0.485679;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R205|974|LOC_Os04g39720|protein_coding|CODING|LOC_Os04g39720.1|2|1) FN1315-S.SNP.4:23674212 chr04:023674212 0 W/23674212-23674212 FN1315-S Single Base Substitution T-G INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2673-S.SNP.4:23677604 chr04:023677604 0 W/23677604-23677604 FN2673-S SNP C -> A AC=1;AN=200;BQB=0.992705;DP=4919;DP4=2405,2239,9,14;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.318357;MQB=0.000320121;MQSB=8.57937e-12;RPB=0.584373;SGB=72.7161;VDB=0.0306906;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G969*|1431|LOC_Os04g39730|protein_coding|CODING|LOC_Os04g39730.1|3|1);LOF=(LOC_Os04g39730|LOC_Os04g39730|1|1.00);NMD=(LOC_Os04g39730|LOC_Os04g39730|1|1.00) FN3424-S.SNP.4:23681370 chr04:023681370 0 W/23681370-23681370 FN3424-S SNP A -> G AC=2;AN=184;BQB=0.966197;DP=3291;DP4=1523,1405,28,10;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.049529;MQB=0.00460891;MQSB=0.00202933;RPB=0.667663;SGB=-46.2728;VDB=0.786881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.4:23687339 chr04:023687339 0 W/23687339-23687339 FN3401-S SNP G -> A AC=2;AN=184;BQB=0.969332;DP=4648;DP4=2356,2185,27,21;HOB=0.0215028;ICB=0.494625;MQ=30;MQ0F=0.131885;MQB=0.000754446;MQSB=1.79943e-23;RPB=0.970824;SGB=211.527;VDB=0.987701;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A232|1611|LOC_Os04g39740|protein_coding|CODING|LOC_Os04g39740.1|2|1) FN1115-S.SNP.4:23688051 chr04:023688051 0 W/23688051-23688051 FN1115-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g39740 retrotransposon protein, putative, unclassified, expressed SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN4114-S.SNP.4:23692284 chr04:023692284 0 W/23692284-23692284 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.958583;DP=3224;DP4=1462,1715,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.49266e-07;MQSB=0.992664;RPB=0.990707;SGB=39.6007;VDB=0.429587;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S478|600|LOC_Os04g39760|protein_coding|CODING|LOC_Os04g39760.1|5|1) FN654-S.SNP.4:23692893 chr04:023692893 0 W/23692893-23692893 FN654-S Single Base Substitution A-T STOP_GAINED HET LOC_Os04g39760 retrotransposon protein, putative, unclassified, expressed SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2185-S.SNP.4:23695341 chr04:023695341 0 W/23695341-23695341 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.98352;DP=4476;DP4=2012,2175,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000223414;MQB=3.8008e-15;MQSB=0.96515;RPB=0.572248;SGB=89.4087;VDB=0.316468;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.4:23695555 chr04:023695555 0 W/23695555-23695555 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.95934;DP=4608;DP4=2365,1969,13,17;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=8.48678e-13;MQSB=0.604963;RPB=0.295727;SGB=63.3521;VDB=0.398756;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.4:23704852 chr04:023704852 0 W/23704852-23704852 FN1257-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3527-S.SNP.4:23710287 chr04:023710287 0 W/23710287-23710287 FN3527-S SNP G -> A AC=1;AN=188;BQB=0.881285;DP=3091;DP4=1430,1521,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.00153e-06;MQSB=0.418619;RPB=0.664624;SGB=21.8113;VDB=0.554245;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S46F|88|LOC_Os04g39800|protein_coding|CODING|LOC_Os04g39800.1|1|1) FN1525-S.SNP.4:23710644 chr04:023710644 0 W/23710644-23710644 FN1525-S Single Base Substitution G-A INTERGENIC Homo SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3652-S.SNP.4:23711254 chr04:023711254 0 W/23711254-23711254 FN3652-S SNP A -> G AC=2;AN=190;BQB=0.9364;DP=2746;DP4=1509,1126,13,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.7555e-13;MQSB=0.995794;RPB=0.994778;SGB=99.1879;VDB=0.618089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.4:23714267 chr04:023714267 0 W/23714267-23714267 FN3433-S SNP A -> G AC=2;AN=184;BQB=0.844138;DP=2866;DP4=1359,1390,19,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.99028e-16;MQSB=0.977216;RPB=0.944654;SGB=95.6183;VDB=0.543918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.4:23724615 chr04:023724615 0 W/23724615-23724615 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.534783;DP=4256;DP4=2009,2001,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0629699;MQB=0.961129;MQSB=0;RPB=0.975702;SGB=50.9344;VDB=0.982899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.4:23729115 chr04:023729115 0 W/23729115-23729115 FN3674-S SNP C -> G AC=1;AN=190;BQB=0.915395;DP=2982;DP4=1381,1471,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57644e-08;MQSB=0.998834;RPB=0.175877;SGB=43.2083;VDB=0.158471;EFF=INTRON(MODIFIER||||494|LOC_Os04g39840|protein_coding|CODING|LOC_Os04g39840.1|8|1),INTRON(MODIFIER||||376|LOC_Os04g39840|protein_coding|CODING|LOC_Os04g39840.2|8|1) FN-335.SNP.4:23737753 chr04:023737753 0 W/23737753-23737753 FN-335 Single Base Substitution G-T INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1617-S.SNP.4:23739206 chr04:023739206 0 W/23739206-23739206 FN1617-S Single Base Substitution A-C INTRON HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1686-S.SNP.4:23746182 chr04:023746182 0 W/23746182-23746182 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.648563;DP=2349;DP4=631,1665,3,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75577e-13;MQSB=0.997872;RPB=0.962699;SGB=38.7926;VDB=0.0304442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.4:23749764 chr04:023749764 0 W/23749764-23749764 FN2544-S SNP C -> A AC=1;AN=198;BQB=0.915164;DP=4497;DP4=2296,1945,18,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00022237;MQB=3.83376e-17;MQSB=0.876298;RPB=0.457841;SGB=55.2955;VDB=0.10422;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A249S|510|LOC_Os04g39880|protein_coding|CODING|LOC_Os04g39880.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A249S|375|LOC_Os04g39880|protein_coding|CODING|LOC_Os04g39880.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A130S|391|LOC_Os04g39880|protein_coding|CODING|LOC_Os04g39880.3|3|1) FN1150-S.SNP.4:23751896 chr04:023751896 0 W/23751896-23751896 FN1150-S Single Base Substitution T-G INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN4271-S.SNP.4:23756326 chr04:023756326 0 W/23756326-23756326 FN4271-S SNP T -> C AC=1;AN=170;BQB=0.99989;DP=2682;DP4=1292,1167,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.53445e-08;MQSB=0.999312;RPB=0.952768;SGB=22.3266;VDB=0.576702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D63G|80|LOC_Os04g39890|protein_coding|CODING|LOC_Os04g39890.1|1|1) FN1650-S.SNP.4:23765167 chr04:023765167 0 W/23765167-23765167 FN1650-S Single Base Substitution G-C SYNONYMOUS_CODING Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN468-S.SNP.4:23769530 chr04:023769530 0 W/23769530-23769530 FN468-S Single Base Substitution A-T INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN418-S.SNP.4:23774920 chr04:023774920 0 W/23774920-23774920 FN418-S Single Base Substitution C-A INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2637-S.SNP.4:23781948 chr04:023781948 0 W/23781948-23781948 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.99564;DP=5197;DP4=2616,2140,10,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000409279;MQSB=0.303835;RPB=0.563908;SGB=14.3054;VDB=0.177195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.4:23789074 chr04:023789074 0 W/23789074-23789074 FN3433-S SNP A -> T AC=2;AN=184;BQB=0.947108;DP=2842;DP4=1521,1218,8,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06763e-09;MQSB=0.940125;RPB=0.545067;SGB=62.3078;VDB=0.926774;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.4:23789074 chr04:023789074 0 W/23789074-23789074 FN4020-S SNP A -> T AC=2;AN=168;BQB=0.978671;DP=2554;DP4=1361,1051,17,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.08378e-15;MQSB=0.956751;RPB=0.540672;SGB=93.0718;VDB=0.67549;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.4:23789074 chr04:023789074 0 W/23789074-23789074 FN884-S Single Base Substitution A-T INTERGENIC HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN_543-2-6.SNP.4:23789074 chr04:023789074 0 W/23789074-23789074 FN_543-2-6 Single Base Substitution A-T Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN793-S.SNP.4:23793538 chr04:023793538 0 W/23793538-23793538 FN793-S Single Base Substitution G-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3824-S.SNP.4:23795433 chr04:023795433 0 W/23795433-23795433 FN3824-S SNP C -> T AC=2;AN=190;BQB=0.920673;DP=2938;DP4=1241,1517,8,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.13483e-13;MQSB=0.957559;RPB=0.910173;SGB=85.8548;VDB=0.222884;EFF=UTR_3_PRIME(MODIFIER||457||300|LOC_Os04g39980|protein_coding|CODING|LOC_Os04g39980.1|3|1) FN-132.SNP.4:23800004 chr04:023800004 0 W/23800004-23800004 FN-132 Single Base Substitution G-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1660-S.SNP.4:23800004 chr04:023800004 0 W/23800004-23800004 FN1660-S Single Base Substitution G-A INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2123-S.SNP.4:23800004 chr04:023800004 0 W/23800004-23800004 FN2123-S SNP G -> A AC=2;AN=168;BQB=0.997278;DP=2171;DP4=1095,984,20,17;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0230309;MQB=0.112532;MQSB=1.1977e-25;RPB=0.992876;SGB=-7.187;VDB=0.183988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.4:23800004 chr04:023800004 0 W/23800004-23800004 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.998435;DP=2303;DP4=1273,927,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00825011;MQB=0.0489515;MQSB=0.990281;RPB=0.974652;SGB=49.0954;VDB=0.223642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.4:23814928 chr04:023814928 0 W/23814928-23814928 FN2609-S SNP T -> C AC=1;AN=198;BQB=0.713534;DP=4013;DP4=1862,1879,21,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.77101e-20;MQSB=0.964119;RPB=0.999898;SGB=-2.5285;VDB=0.249472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.4:23815908 chr04:023815908 0 W/23815908-23815908 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.953638;DP=2864;DP4=1536,1263,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.70895e-08;MQSB=0.966208;RPB=0.877629;SGB=62.6088;VDB=0.645277;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G381|520|LOC_Os04g40010|protein_coding|CODING|LOC_Os04g40010.1|1|1) FN906-S.SNP.4:23850898 chr04:023850898 0 W/23850898-23850898 FN906-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN3983-S.SNP.4:23854773 chr04:023854773 0 W/23854773-23854773 FN3983-S SNP G -> A AC=2;AN=168;BQB=0.109929;DP=2401;DP4=1212,1089,11,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.37071e-08;MQSB=0.99984;RPB=0.998675;SGB=62.1945;VDB=0.863908;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.4:23859513 chr04:023859513 0 W/23859513-23859513 FN1746-S SNP T -> C AC=1;AN=188;BQB=0.760315;DP=3918;DP4=1927,1940,16,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.08615e-12;MQSB=0.944464;RPB=0.999197;SGB=-111.008;VDB=0.790723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S98P|706|LOC_Os04g40070|protein_coding|CODING|LOC_Os04g40070.1|1|1) FN_949-1.SNP.4:23861068 chr04:023861068 0 W/23861068-23861068 FN_949-1 Single Base Substitution A-T Homo LOC_Os04g40070 GRAM and C2 domains containing protein, putative, expressed SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN3454-S.SNP.4:23874864 chr04:023874864 0 W/23874864-23874864 FN3454-S SNP G -> A AC=1;AN=184;BQB=0.702438;DP=2831;DP4=1330,1412,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.198837;MQSB=0.552267;RPB=0.742823;SGB=39.699;VDB=0.800627;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.4:23889356 chr04:023889356 0 W/23889356-23889356 FN-161 Single Base Substitution C-A INTRON HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN632-S.SNP.4:23896054 chr04:023896054 0 W/23896054-23896054 FN632-S Single Base Substitution C-T INTRON HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN3912-S.SNP.4:23902451 chr04:023902451 0 W/23902451-23902451 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.92472;DP=2505;DP4=1309,1126,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000983048;MQSB=0.99364;RPB=0.679846;SGB=25.2211;VDB=0.319019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.4:23908116 chr04:023908116 0 W/23908116-23908116 FN1660-S Single Base Substitution T-A INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3840-S.SNP.4:23913769 chr04:023913769 0 W/23913769-23913769 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.988402;DP=2862;DP4=976,1737,2,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8311e-09;MQSB=0.999547;RPB=0.383041;SGB=46.7622;VDB=0.169584;EFF=INTRON(MODIFIER||||230|LOC_Os04g40180|protein_coding|CODING|LOC_Os04g40180.1|1|1) FN2155-S.SNP.4:23914296 chr04:023914296 0 W/23914296-23914296 FN2155-S SNP C -> T AC=1;AN=168;BQB=0.82452;DP=2952;DP4=1923,998,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92324e-08;MQSB=0.975252;RPB=0.745732;SGB=-63.3606;VDB=0.906964;EFF=INTRON(MODIFIER||||230|LOC_Os04g40180|protein_coding|CODING|LOC_Os04g40180.1|1|1) FN3714-S.SNP.4:23917467 chr04:023917467 0 W/23917467-23917467 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.773518;DP=2760;DP4=1199,1320,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.65094e-11;MQSB=0.531617;RPB=0.539578;SGB=68.0854;VDB=0.759916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.4:23917993 chr04:023917993 0 W/23917993-23917993 FN2600-S SNP G -> C AC=1;AN=198;BQB=0.677143;DP=4006;DP4=1936,1875,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20963e-08;MQSB=0.616852;RPB=0.986153;SGB=47.3393;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.4:23923775 chr04:023923775 0 W/23923775-23923775 FN1685-S SNP G -> C AC=1;AN=188;BQB=0.502088;DP=3266;DP4=1293,1935,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.00225e-13;MQSB=0.732674;RPB=0.841746;SGB=46.4225;VDB=0.38216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S90T|271|LOC_Os04g40210|protein_coding|CODING|LOC_Os04g40210.1|1|1) FN1022-S.SNP.4:23923986 chr04:023923986 0 W/23923986-23923986 FN1022-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN318-S.SNP.4:23925865 chr04:023925865 0 W/23925865-23925865 FN318-S Single Base Substitution C-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3525-S.SNP.4:23928393 chr04:023928393 0 W/23928393-23928393 FN3525-S SNP T -> G AC=2;AN=188;BQB=0.995234;DP=2692;DP4=1209,1396,8,10;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0170877;MQB=0.996734;MQSB=0.00169083;RPB=0.990815;SGB=53.7007;VDB=0.853254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Gac|Y233D|860|LOC_Os04g40220|protein_coding|CODING|LOC_Os04g40220.1|2|1) FN504-S.SNP.4:23929338 chr04:023929338 0 W/23929338-23929338 FN504-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2594-S.SNP.4:23931298 chr04:023931298 0 W/23931298-23931298 FN2594-S SNP C -> T AC=2;AN=198;BQB=0.969029;DP=2433;DP4=1437,809,11,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.56359e-09;MQSB=0.344777;RPB=0.911604;SGB=67.9293;VDB=0.0432122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.4:23931311 chr04:023931311 0 W/23931311-23931311 FN2692-S SNP G -> A AC=1;AN=198;BQB=0.519204;DP=2953;DP4=1580,926,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00336545;MQSB=0.0843688;RPB=0.327101;SGB=25.849;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.4:23944044 chr04:023944044 0 W/23944044-23944044 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.964607;DP=2703;DP4=1528,1076,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9357e-05;MQSB=0.794452;RPB=0.930894;SGB=39.9877;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.4:23944532 chr04:023944532 0 W/23944532-23944532 FN1375-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3834-S.SNP.4:23955112 chr04:023955112 0 W/23955112-23955112 FN3834-S SNP T -> C AC=1;AN=190;BQB=0.857487;DP=2670;DP4=1015,1516,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00149813;MQB=7.19467e-05;MQSB=0.53077;RPB=0.989088;SGB=25.439;VDB=0.270873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.4:23956039 chr04:023956039 0 W/23956039-23956039 FN1541-S Single Base Substitution A-T INTRON HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN3956-S.SNP.4:23960344 chr04:023960344 0 W/23960344-23960344 FN3956-S SNP C -> T AC=2;AN=168;BQB=0.999832;DP=3083;DP4=1573,1409,10,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.23624e-11;MQSB=0.936002;RPB=0.618343;SGB=78.7577;VDB=0.487507;EFF=UTR_3_PRIME(MODIFIER||37||406|LOC_Os04g40300|protein_coding|CODING|LOC_Os04g40300.1|4|1) FN3637-S.SNP.4:23972682 chr04:023972682 0 W/23972682-23972682 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.913089;DP=2425;DP4=1141,1197,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81855e-07;MQSB=0.969488;RPB=0.817774;SGB=28.9929;VDB=0.481974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.4:23979097 chr04:023979097 0 W/23979097-23979097 FN1630-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g40330 OsFBX141 - F-box domain containing protein, expressed SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2433.SNP.4:23980661 chr04:023980661 0 W/23980661-23980661 FN2433 SNP G -> T AC=1;AN=200;BQB=0.925587;DP=4126;DP4=2083,1770,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95232e-08;MQSB=0.313783;RPB=0.765714;SGB=26.8797;VDB=0.600127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.4:23984560 chr04:023984560 0 W/23984560-23984560 FN3753-S SNP C -> G AC=1;AN=190;BQB=0.865836;DP=2478;DP4=1159,1236,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0169492;MQB=0.262207;MQSB=0.504004;RPB=0.977998;SGB=14.7784;VDB=0.895085;EFF=INTRON(MODIFIER||||136|LOC_Os04g40340|protein_coding|CODING|LOC_Os04g40340.1|7|1) FN1582-S.SNP.4:24012802 chr04:024012802 0 W/24012802-24012802 FN1582-S Single Base Substitution G-A INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN730-S.SNP.4:24016409 chr04:024016409 0 W/24016409-24016409 FN730-S Single Base Substitution A-T INTRON HOMO SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-142.SNP.4:24017693 chr04:024017693 0 W/24017693-24017693 FN-142 Single Base Substitution T-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN425-S.SNP.4:24026286 chr04:024026286 0 W/24026286-24026286 FN425-S Single Base Substitution T-G INTERGENIC HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1520-S.SNP.4:24031368 chr04:024031368 0 W/24031368-24031368 FN1520-S Single Base Substitution A-C INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1520-S.SNP.4:24031369 chr04:024031369 0 W/24031369-24031369 FN1520-S Single Base Substitution G-T INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1106-S.SNP.4:24031659 chr04:024031659 0 W/24031659-24031659 FN1106-S Single Base Substitution G-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2530-S.SNP.4:24045504 chr04:024045504 0 W/24045504-24045504 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.84982;DP=4248;DP4=2052,1883,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.61786e-12;MQSB=0.992772;RPB=0.98492;SGB=-62.6354;VDB=0.826262;EFF=INTRON(MODIFIER||||588|LOC_Os04g40460|protein_coding|CODING|LOC_Os04g40460.1|1|1) FN2795-S.SNP.4:24045950 chr04:024045950 0 W/24045950-24045950 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.78938;DP=4272;DP4=2081,1990,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.00109423;MQSB=0.127017;RPB=0.647755;SGB=24.1541;VDB=0.930037;EFF=INTRON(MODIFIER||||588|LOC_Os04g40460|protein_coding|CODING|LOC_Os04g40460.1|1|1) FN-346.SNP.4:24056559 chr04:024056559 0 W/24056559-24056559 FN-346 Single Base Substitution A-T INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN4130-S.SNP.4:24056773 chr04:024056773 0 W/24056773-24056773 FN4130-S SNP T -> G AC=1;AN=182;BQB=0.938975;DP=2814;DP4=1458,1267,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.84311e-06;MQSB=0.995252;RPB=0.965445;SGB=35.0899;VDB=0.401367;EFF=INTRON(MODIFIER||||554|LOC_Os04g40490|protein_coding|CODING|LOC_Os04g40490.1|1|1) FN2492.SNP.4:24082594 chr04:024082594 0 W/24082594-24082594 FN2492 SNP C -> T AC=1;AN=200;BQB=0.993917;DP=5023;DP4=2533,2155,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199084;MQB=2.94719e-16;MQSB=0.876573;RPB=0.62022;SGB=-72.2589;VDB=0.0967742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.4:24087813 chr04:024087813 0 W/24087813-24087813 FN3387-S SNP G -> A AC=1;AN=184;BQB=0.645801;DP=3358;DP4=1622,1609,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.80166e-06;MQSB=0.711245;RPB=0.710668;SGB=23.2751;VDB=0.37356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T72M|470|LOC_Os04g40560|protein_coding|CODING|LOC_Os04g40560.1|1|1) FN2709-S.SNP.4:24094223 chr04:024094223 0 W/24094223-24094223 FN2709-S SNP T -> A AC=2;AN=200;BQB=0.176077;DP=5024;DP4=2034,2724,13,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.34979e-21;MQSB=0.977173;RPB=0.902421;SGB=126.794;VDB=0.622455;EFF=INTRON(MODIFIER||||1279|LOC_Os04g40570|protein_coding|CODING|LOC_Os04g40570.1|1|1) FN1324-S.SNP.4:24107966 chr04:024107966 0 W/24107966-24107966 FN1324-S Single Base Substitution C-T INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN3422-S.SNP.4:24111872 chr04:024111872 0 W/24111872-24111872 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.972491;DP=3424;DP4=1595,1733,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.000584112;MQB=0.0342948;MQSB=0.000568131;RPB=0.878642;SGB=78.0093;VDB=0.531922;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.4:24113315 chr04:024113315 0 W/24113315-24113315 FN4108-S SNP T -> C AC=1;AN=182;BQB=0.988472;DP=2962;DP4=1392,1481,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.92215e-08;MQSB=0.989731;RPB=0.202712;SGB=48.6223;VDB=0.229729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.4:24114540 chr04:024114540 0 W/24114540-24114540 FN1329-S Single Base Substitution C-T INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-306.SNP.4:24126661 chr04:024126661 0 W/24126661-24126661 FN-306 Single Base Substitution G-C INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN704-S.SNP.4:24127913 chr04:024127913 0 W/24127913-24127913 FN704-S Single Base Substitution G-A INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3627-S.SNP.4:24144617 chr04:024144617 0 W/24144617-24144617 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.840961;DP=2806;DP4=1356,1350,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.10802e-06;MQSB=0.860076;RPB=0.51512;SGB=36.1006;VDB=0.105663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.4:24144964 chr04:024144964 0 W/24144964-24144964 FN3578-S SNP T -> C AC=2;AN=188;BQB=0.957427;DP=2741;DP4=1430,1202,18,16;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=6.15276e-11;MQSB=0.000799013;RPB=0.296601;SGB=110.393;VDB=0.571524;EFF=INTERGENIC(MODIFIER||||||||||1) FN-388.SNP.4:24148717 chr04:024148717 0 W/24148717-24148717 FN-388 Single Base Substitution G-A INTERGENIC HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN3311-S.SNP.4:24150069 chr04:024150069 0 W/24150069-24150069 FN3311-S SNP C -> T AC=2;AN=184;BQB=0.805494;DP=3058;DP4=1454,1449,34,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.41965e-29;MQSB=0.789202;RPB=0.33198;SGB=242.191;VDB=0.251857;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.4:24150247 chr04:024150247 0 W/24150247-24150247 FN-257 Single Base Substitution A-G INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3738-S.SNP.4:24151392 chr04:024151392 0 W/24151392-24151392 FN3738-S SNP A -> G AC=1;AN=190;BQB=0.872264;DP=2969;DP4=1434,1377,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68753e-05;MQSB=0.996729;RPB=0.938542;SGB=49.0954;VDB=0.881069;EFF=INTRON(MODIFIER||||85|LOC_Os04g40690|protein_coding|CODING|LOC_Os04g40690.1|1|1) FN995-S.SNP.4:24151757 chr04:024151757 0 W/24151757-24151757 FN995-S Single Base Substitution A-T INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN2788-S.SNP.4:24171590 chr04:024171590 0 W/24171590-24171590 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.824422;DP=4494;DP4=2148,1789,14,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.81245e-16;MQSB=0.0299303;RPB=0.0732729;SGB=-79.494;VDB=0.503269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.4:24171860 chr04:024171860 0 W/24171860-24171860 FN2387 SNP G -> A AC=2;AN=192;BQB=0.000848866;DP=5219;DP4=2307,2315,40,37;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=2.65079e-27;MQSB=0.689891;RPB=0.699285;SGB=297.283;VDB=0.184194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.4:24179144 chr04:024179144 0 W/24179144-24179144 FN2485 SNP A -> T AC=1;AN=200;BQB=0.995955;DP=3830;DP4=2102,1506,9,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.39095e-08;MQSB=5.60405e-20;RPB=0.920658;SGB=68.0801;VDB=0.915407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.4:24184866 chr04:024184866 0 W/24184866-24184866 FN1150-S Single Base Substitution T-A START_GAINED HET LOC_Os04g40740 kelch repeat protein, putative, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN-346.SNP.4:24196461 chr04:024196461 0 W/24196461-24196461 FN-346 Single Base Substitution A-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2742-S.SNP.4:24206175 chr04:024206175 0 W/24206175-24206175 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.568439;DP=4798;DP4=2167,2401,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19446e-11;MQSB=0.993489;RPB=0.757718;SGB=37.3004;VDB=0.530999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.4:24208331 chr04:024208331 0 W/24208331-24208331 FN2696-S SNP A -> G AC=1;AN=200;BQB=0.200109;DP=4787;DP4=2266,2333,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.88319e-12;MQSB=0.999376;RPB=0.96987;SGB=65.5058;VDB=0.234864;EFF=INTRON(MODIFIER||||464|LOC_Os04g40800|protein_coding|CODING|LOC_Os04g40800.1|4|1) FN2572-S.SNP.4:24221480 chr04:024221480 0 W/24221480-24221480 FN2572-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3343-S.SNP.4:24222353 chr04:024222353 0 W/24222353-24222353 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.556676;DP=2793;DP4=1271,1419,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35785e-11;MQSB=0.99825;RPB=0.741638;SGB=35.884;VDB=0.337234;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.4:24228385 chr04:024228385 0 W/24228385-24228385 FN-281 Single Base Substitution T-C INTERGENIC HOMO SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2328.SNP.4:24252112 chr04:024252112 0 W/24252112-24252112 FN2328 SNP C -> T AC=1;AN=192;BQB=0.664148;DP=4646;DP4=2187,2244,18,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.41192e-14;MQSB=0.628968;RPB=0.868187;SGB=57.1218;VDB=0.517404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.4:24261331 chr04:024261331 0 W/24261331-24261331 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.664914;DP=5011;DP4=2564,2141,22,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.03065e-19;MQSB=0.993312;RPB=0.999911;SGB=35.1726;VDB=0.778454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.4:24273744 chr04:024273744 0 W/24273744-24273744 FN3906-S SNP C -> A AC=1;AN=158;BQB=0.916736;DP=2810;DP4=1261,1447,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.88459e-07;MQSB=0.992398;RPB=0.182399;SGB=42.6978;VDB=0.537887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.4:24280280 chr04:024280280 0 W/24280280-24280280 FN2345 SNP G -> A AC=2;AN=192;BQB=0.895086;DP=4847;DP4=2084,2401,39,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.60478e-39;MQSB=0.54281;RPB=0.818786;SGB=198.919;VDB=0.977344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S401F|420|LOC_Os04g40910|protein_coding|CODING|LOC_Os04g40910.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S434F|453|LOC_Os04g40910|protein_coding|CODING|LOC_Os04g40910.1|2|1) FN409-S.SNP.4:24281550 chr04:024281550 0 W/24281550-24281550 FN409-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g40910 OsFBX146 - F-box domain containing protein, expressed SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3877-S.SNP.4:24288992 chr04:024288992 0 W/24288992-24288992 FN3877-S SNP C -> G AC=2;AN=158;BQB=0.96372;DP=2854;DP4=1504,1234,25,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.18552e-24;MQSB=0.939562;RPB=0.726437;SGB=186.889;VDB=0.886431;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.4:24289887 chr04:024289887 0 W/24289887-24289887 FN-301 Single Base Substitution G-A INTERGENIC HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2329.SNP.4:24290931 chr04:024290931 0 W/24290931-24290931 FN2329 SNP C -> A AC=1;AN=192;BQB=0.43118;DP=4791;DP4=2304,2185,14,5;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.00417449;MQB=0.161029;MQSB=0.00728586;RPB=0.687201;SGB=57.6018;VDB=0.650952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.4:24291015 chr04:024291015 0 W/24291015-24291015 FN2181-S SNP T -> C AC=2;AN=190;BQB=0.982081;DP=4002;DP4=1874,1760,29,13;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.00849575;MQB=0.307162;MQSB=6.78914e-08;RPB=0.73157;SGB=46.0658;VDB=0.624189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.4:24296574 chr04:024296574 0 W/24296574-24296574 FN2356 SNP C -> T AC=2;AN=192;BQB=0.494875;DP=4267;DP4=1991,1950,19,24;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=2.32098e-14;MQSB=0.543906;RPB=0.449898;SGB=143.146;VDB=0.321815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P8S|385|LOC_Os04g40930|protein_coding|CODING|LOC_Os04g40930.1|1|1) FN2456.SNP.4:24300409 chr04:024300409 0 W/24300409-24300409 FN2456 SNP C -> A AC=2;AN=200;BQB=0.889842;DP=4936;DP4=2496,2156,24,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.69969e-25;MQSB=0.991696;RPB=0.147948;SGB=89.4038;VDB=0.41077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F326L|385|LOC_Os04g40930|protein_coding|CODING|LOC_Os04g40930.1|5|1) FN2349.SNP.4:24300450 chr04:024300450 0 W/24300450-24300450 FN2349 SNP C -> G AC=2;AN=192;BQB=0.997277;DP=4810;DP4=2450,2155,27,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.50265e-28;MQSB=0.879739;RPB=0.881487;SGB=168.097;VDB=0.778993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T340S|385|LOC_Os04g40930|protein_coding|CODING|LOC_Os04g40930.1|5|1) FN840-S.SNP.4:24312835 chr04:024312835 0 W/24312835-24312835 FN840-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g40970 DEAD-box ATP-dependent RNA helicase, putative, expressed SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3777-S.SNP.4:24317272 chr04:024317272 0 W/24317272-24317272 FN3777-S SNP T -> C AC=2;AN=190;BQB=0.653613;DP=2565;DP4=1227,1254,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.63656e-13;MQSB=0.99975;RPB=0.402022;SGB=75.1932;VDB=0.1873;EFF=INTRON(MODIFIER||||926|LOC_Os04g40970|protein_coding|CODING|LOC_Os04g40970.1|14|1) FN601-S.SNP.4:24319257 chr04:024319257 0 W/24319257-24319257 FN601-S Single Base Substitution T-A INTRON HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN4206-S.SNP.4:24323510 chr04:024323510 0 W/24323510-24323510 FN4206-S SNP C -> A AC=2;AN=170;BQB=0.911552;DP=2401;DP4=1070,1249,9,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.60901e-14;MQSB=0.857222;RPB=0.290432;SGB=92.2986;VDB=0.880738;EFF=INTRON(MODIFIER||||153|LOC_Os04g40980|protein_coding|CODING|LOC_Os04g40980.1|2|1) FN2123-S.SNP.4:24325405 chr04:024325405 0 W/24325405-24325405 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.0548762;DP=3252;DP4=1587,1627,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.78801e-11;MQSB=0.888452;RPB=0.882205;SGB=-133.625;VDB=0.977299;EFF=UTR_3_PRIME(MODIFIER||131||153|LOC_Os04g40980|protein_coding|CODING|LOC_Os04g40980.1|5|1) FN581-S.SNP.4:24332230 chr04:024332230 0 W/24332230-24332230 FN581-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3732-S.SNP.4:24339284 chr04:024339284 0 W/24339284-24339284 FN3732-S SNP A -> G AC=1;AN=190;BQB=0.894972;DP=2685;DP4=1208,1317,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.59041e-08;MQSB=0.859238;RPB=0.975664;SGB=53.6492;VDB=0.182601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.4:24339322 chr04:024339322 0 W/24339322-24339322 FN4081-S SNP G -> T AC=2;AN=182;BQB=0.974982;DP=2811;DP4=1343,1380,5,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.75329e-10;MQSB=0.926721;RPB=0.907076;SGB=46.1603;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.4:24343687 chr04:024343687 0 W/24343687-24343687 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.660842;DP=2648;DP4=1209,1365,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33471e-08;MQSB=0.934246;RPB=0.998274;SGB=53.3568;VDB=0.5;EFF=UTR_3_PRIME(MODIFIER||114||420|LOC_Os04g41020|protein_coding|CODING|LOC_Os04g41020.1|7|1) FN2271-S.SNP.4:24344985 chr04:024344985 0 W/24344985-24344985 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.345739;DP=4847;DP4=2259,2241,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31067e-14;MQSB=0.9143;RPB=0.994869;SGB=89.4087;VDB=0.197687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.4:24344997 chr04:024344997 0 W/24344997-24344997 FN-277 Single Base Substitution C-A INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-339.SNP.4:24360685 chr04:024360685 0 W/24360685-24360685 FN-339 Single Base Substitution C-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN2614-S.SNP.4:24360819 chr04:024360819 0 W/24360819-24360819 FN2614-S SNP T -> A AC=2;AN=198;BQB=0.42358;DP=3716;DP4=1333,1882,17,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.14964e-18;MQSB=0.0771146;RPB=0.900022;SGB=108.456;VDB=0.705263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.4:24364235 chr04:024364235 0 W/24364235-24364235 FN2600-S SNP A -> G AC=2;AN=198;BQB=0.852354;DP=4114;DP4=2108,1687,27,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.77346e-19;MQSB=0.955798;RPB=0.274686;SGB=42.8469;VDB=0.842308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.4:24366768 chr04:024366768 0 W/24366768-24366768 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.950539;DP=3392;DP4=1282,1994,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.95391e-10;MQSB=0.975969;RPB=0.958481;SGB=66.8296;VDB=0.729578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.4:24367900 chr04:024367900 0 W/24367900-24367900 FN2430 SNP A -> G AC=1;AN=200;BQB=0.475353;DP=4909;DP4=2234,2157,15,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.70418e-18;MQSB=0.354057;RPB=0.45954;SGB=-83.4175;VDB=0.580938;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.4:24369605 chr04:024369605 0 W/24369605-24369605 FN-107 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g41090 retrotransposon protein, putative, unclassified, expressed SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN776-S.SNP.4:24372962 chr04:024372962 0 W/24372962-24372962 FN776-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g41100 cyclin-dependent kinase G-2, putative, expressed SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1476-S.SNP.4:24382093 chr04:024382093 0 W/24382093-24382093 FN1476-S Single Base Substitution A-C INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3738-S.SNP.4:24395989 chr04:024395989 0 W/24395989-24395989 FN3738-S SNP C -> T AC=1;AN=190;BQB=0.933504;DP=3001;DP4=1418,1478,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.48098e-10;MQSB=0.951808;RPB=0.937152;SGB=80.9724;VDB=0.0365919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.4:24413511 chr04:024413511 0 W/24413511-24413511 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.674648;DP=2886;DP4=1486,1290,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75499e-08;MQSB=0.987941;RPB=0.631088;SGB=62.6088;VDB=0.459099;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.4:24414994 chr04:024414994 0 W/24414994-24414994 FN-200 Single Base Substitution G-A INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3376-S.SNP.4:24416194 chr04:024416194 0 W/24416194-24416194 FN3376-S SNP G -> A AC=2;AN=184;BQB=0.972821;DP=2851;DP4=1463,1246,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.62488e-19;MQSB=0.935417;RPB=0.798996;SGB=120.271;VDB=0.242765;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.4:24420115 chr04:024420115 0 W/24420115-24420115 FN1412-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1606-S.SNP.4:24421969 chr04:024421969 0 W/24421969-24421969 FN1606-S Single Base Substitution T-C INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2288.SNP.4:24421969 chr04:024421969 0 W/24421969-24421969 FN2288 SNP T -> C AC=1;AN=192;BQB=0.549792;DP=4765;DP4=1946,2242,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000419727;MQB=4.39212e-07;MQSB=0.56603;RPB=0.373721;SGB=49.2105;VDB=0.0632579;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.4:24425172 chr04:024425172 0 W/24425172-24425172 FN4041-S SNP C -> T AC=2;AN=168;BQB=0.960675;DP=2791;DP4=1421,1230,15,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.13905e-13;MQSB=0.864874;RPB=0.802651;SGB=87.6193;VDB=0.104926;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.4:24425535 chr04:024425535 0 W/24425535-24425535 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.814447;DP=5139;DP4=2629,2175,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.30682e-12;MQSB=0.927072;RPB=0.995863;SGB=39.9056;VDB=0.893866;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.4:24429411 chr04:024429411 0 W/24429411-24429411 FN-115 Single Base Substitution C-T INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1307-S.SNP.4:24429411 chr04:024429411 0 W/24429411-24429411 FN1307-S Single Base Substitution C-T INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2114-S.SNP.4:24431197 chr04:024431197 0 W/24431197-24431197 FN2114-S SNP G -> T AC=1;AN=168;BQB=0.13614;DP=3513;DP4=1659,1817,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93119e-05;MQSB=0.93751;RPB=0.19789;SGB=-37.7974;VDB=0.586414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.4:24431819 chr04:024431819 0 W/24431819-24431819 FN-131 Single Base Substitution G-T UTR_3_PRIME HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3705-S.SNP.4:24441769 chr04:024441769 0 W/24441769-24441769 FN3705-S SNP T -> A AC=1;AN=190;BQB=0.409112;DP=2806;DP4=1351,1328,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85586e-05;MQSB=0.99458;RPB=0.925819;SGB=23.6597;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.4:24453240 chr04:024453240 0 W/24453240-24453240 FN3630-S SNP C -> A AC=1;AN=190;BQB=0.95254;DP=2828;DP4=1639,1105,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.88251e-05;MQSB=0.975689;RPB=0.886134;SGB=26.3271;VDB=0.281405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.4:24463387 chr04:024463387 0 W/24463387-24463387 FN2666-S SNP G -> A AC=2;AN=200;BQB=0.869937;DP=5104;DP4=2251,2537,21,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.11683e-24;MQSB=0.967017;RPB=0.797449;SGB=192.42;VDB=0.925217;EFF=INTRON(MODIFIER||||369|LOC_Os04g41229|protein_coding|CODING|LOC_Os04g41229.1|1|1),INTRON(MODIFIER||||347|LOC_Os04g41229|protein_coding|CODING|LOC_Os04g41229.2|1|1) FN2781-S.SNP.4:24468499 chr04:024468499 0 W/24468499-24468499 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.272324;DP=1793;DP4=1624,65,11,0;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.88438e-07;MQSB=0.881204;RPB=0.439471;SGB=44.9538;VDB=0.951802;EFF=UTR_3_PRIME(MODIFIER||31||369|LOC_Os04g41229|protein_coding|CODING|LOC_Os04g41229.1|6|1) FN3444-S.SNP.4:24472790 chr04:024472790 0 W/24472790-24472790 FN3444-S SNP A -> C AC=1;AN=184;BQB=0.991289;DP=3250;DP4=1635,1449,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.32034e-11;MQSB=0.978721;RPB=0.493188;SGB=56.8786;VDB=0.458107;EFF=UTR_3_PRIME(MODIFIER||396||120|LOC_Os04g41238|protein_coding|CODING|LOC_Os04g41238.1|1|1),INTRON(MODIFIER||||800|LOC_Os04g41250|protein_coding|CODING|LOC_Os04g41250.1|1|1) FN1214-S.SNP.4:24485955 chr04:024485955 0 W/24485955-24485955 FN1214-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1214-S.SNP.4:24485956 chr04:024485956 0 W/24485956-24485956 FN1214-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g41260 amine oxidase, flavin-containing, domain containing protein, expressed SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2725-S.SNP.4:24486051 chr04:024486051 0 W/24486051-24486051 FN2725-S SNP G -> T AC=1;AN=200;BQB=0.780661;DP=4320;DP4=1962,2207,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02397e-12;MQSB=0.987613;RPB=0.320056;SGB=81.8956;VDB=0.0578311;EFF=INTRON(MODIFIER||||574|LOC_Os04g41260|protein_coding|CODING|LOC_Os04g41260.1|12|1) FN2618-S.SNP.4:24503045 chr04:024503045 0 W/24503045-24503045 FN2618-S SNP C -> T AC=2;AN=198;BQB=0.647055;DP=4049;DP4=1877,1914,17,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.48797e-24;MQSB=0.967772;RPB=0.54214;SGB=104.603;VDB=0.810955;EFF=INTRON(MODIFIER||||772|LOC_Os04g41280|protein_coding|CODING|LOC_Os04g41280.1|2|1) FN625-S.SNP.4:24504874 chr04:024504874 0 W/24504874-24504874 FN625-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g41280 ankyrin repeat domain containing protein, expressed SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2378.SNP.4:24511309 chr04:024511309 0 W/24511309-24511309 FN2378 SNP C -> T AC=1;AN=192;BQB=0.292344;DP=5051;DP4=2557,2208,18,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000395961;MQB=1.56701e-14;MQSB=0.97953;RPB=0.581395;SGB=89.6809;VDB=0.147674;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.4:24513198 chr04:024513198 0 W/24513198-24513198 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.982674;DP=2574;DP4=1420,1091,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.33564e-05;MQSB=0.999318;RPB=0.99971;SGB=30.1021;VDB=0.554573;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E77|366|LOC_Os04g41310|protein_coding|CODING|LOC_Os04g41310.1|2|1),UTR_5_PRIME(MODIFIER||294||214|LOC_Os04g41310|protein_coding|CODING|LOC_Os04g41310.2|2|1) FN2650-S.SNP.4:24515635 chr04:024515635 0 W/24515635-24515635 FN2650-S SNP A -> G AC=1;AN=200;BQB=0.909313;DP=4569;DP4=2148,2207,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34297e-10;MQSB=0.757432;RPB=0.069276;SGB=47.4799;VDB=0.832695;EFF=UTR_3_PRIME(MODIFIER||864||405|LOC_Os04g41320|protein_coding|CODING|LOC_Os04g41320.1|16|1),UTR_3_PRIME(MODIFIER||584||366|LOC_Os04g41310|protein_coding|CODING|LOC_Os04g41310.1|7|1),UTR_3_PRIME(MODIFIER||584||214|LOC_Os04g41310|protein_coding|CODING|LOC_Os04g41310.2|6|1) FN-338.SNP.4:24518295 chr04:024518295 0 W/24518295-24518295 FN-338 Single Base Substitution G-A INTRON HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2229-S.SNP.4:24519569 chr04:024519569 0 W/24519569-24519569 FN2229-S SNP T -> A AC=1;AN=190;BQB=0.876767;DP=5157;DP4=2531,2343,23,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.65107e-21;MQSB=0.991196;RPB=0.670262;SGB=82.3989;VDB=0.583427;EFF=INTRON(MODIFIER||||405|LOC_Os04g41320|protein_coding|CODING|LOC_Os04g41320.1|5|1) FN4110-S.SNP.4:24522613 chr04:024522613 0 W/24522613-24522613 FN4110-S SNP G -> T AC=1;AN=182;BQB=0.967554;DP=2844;DP4=1290,1482,6,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.50142e-14;MQSB=0.828931;RPB=0.0945578;SGB=93.7308;VDB=0.508057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-142.SNP.4:24526899 chr04:024526899 0 W/24526899-24526899 FN-142 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g41330 expressed protein SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN4208-S.SNP.4:24531126 chr04:024531126 0 W/24531126-24531126 FN4208-S SNP T -> A AC=1;AN=170;BQB=0.745501;DP=2438;DP4=1266,1112,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.18433e-10;MQSB=0.978402;RPB=0.80827;SGB=45.206;VDB=0.780046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:24546838 chr04:024546838 0 W/24546838-24546838 FN2618-S SNP A -> G AC=1;AN=198;BQB=0.880404;DP=3855;DP4=1797,1783,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.78493e-09;MQSB=0.819889;RPB=0.904003;SGB=58.1246;VDB=0.275357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V560A|572|LOC_Os04g41400|protein_coding|CODING|LOC_Os04g41400.1|5|1) FN1307-S.SNP.4:24549025 chr04:024549025 0 W/24549025-24549025 FN1307-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os04g41400 peptide transporter PTR2, putative, expressed SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2229-S.SNP.4:24571333 chr04:024571333 0 W/24571333-24571333 FN2229-S SNP C -> A AC=1;AN=190;BQB=0.999798;DP=3442;DP4=1713,1321,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000581058;MQB=1.47413e-11;MQSB=0.00121797;RPB=0.89569;SGB=117.403;VDB=0.220117;EFF=UTR_5_PRIME(MODIFIER||319||506|LOC_Os04g41460|protein_coding|CODING|LOC_Os04g41460.1|1|1) FN2235-S.SNP.4:24578261 chr04:024578261 0 W/24578261-24578261 FN2235-S SNP A -> G AC=1;AN=190;BQB=0.976062;DP=4697;DP4=2051,2265,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44542e-14;MQSB=0.775308;RPB=0.286157;SGB=99.1879;VDB=0.682601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.4:24580611 chr04:024580611 0 W/24580611-24580611 FN1552-S SNP C -> A AC=2;AN=188;BQB=0.115933;DP=4268;DP4=2144,2071,26,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.59718e-18;MQSB=0.853906;RPB=0.79613;SGB=-155.228;VDB=0.453964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.4:24583422 chr04:024583422 0 W/24583422-24583422 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.617192;DP=4283;DP4=2179,1846,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.18556e-10;MQSB=0.917358;RPB=0.743403;SGB=51.0851;VDB=0.757788;EFF=INTRON(MODIFIER||||589|LOC_Os04g41470|protein_coding|CODING|LOC_Os04g41470.1|1|1),INTRON(MODIFIER||||427|LOC_Os04g41470|protein_coding|CODING|LOC_Os04g41470.2|1|1) FN3355-S.SNP.4:24583559 chr04:024583559 0 W/24583559-24583559 FN3355-S SNP T -> C AC=1;AN=184;BQB=0.995386;DP=2399;DP4=1123,1184,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05818e-06;MQSB=0.976992;RPB=0.769917;SGB=32.2261;VDB=0.575341;EFF=INTRON(MODIFIER||||589|LOC_Os04g41470|protein_coding|CODING|LOC_Os04g41470.1|1|1),INTRON(MODIFIER||||427|LOC_Os04g41470|protein_coding|CODING|LOC_Os04g41470.2|1|1) FN1614-S.SNP.4:24583998 chr04:024583998 0 W/24583998-24583998 FN1614-S Single Base Substitution A-T INTRON Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1142-S.SNP.4:24600062 chr04:024600062 0 W/24600062-24600062 FN1142-S Single Base Substitution T-C INTRON HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN3510-S.SNP.4:24601642 chr04:024601642 0 W/24601642-24601642 FN3510-S SNP A -> T AC=1;AN=188;BQB=0.453946;DP=2618;DP4=1348,1211,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38333e-07;MQSB=0.992129;RPB=0.780695;SGB=62.6088;VDB=0.700368;EFF=INTRON(MODIFIER||||1383|LOC_Os04g41490|protein_coding|CODING|LOC_Os04g41490.1|20|1) FN4160-S.SNP.4:24607859 chr04:024607859 0 W/24607859-24607859 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.540217;DP=2580;DP4=1142,1353,12,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.57543e-15;MQSB=0.96426;RPB=0.348672;SGB=86.5178;VDB=0.2537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.4:24612955 chr04:024612955 0 W/24612955-24612955 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.999341;DP=2725;DP4=1397,1231,14,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38223e-08;MQSB=0.876803;RPB=0.758616;SGB=71.8647;VDB=0.896702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P4S|346|LOC_Os04g41500|protein_coding|CODING|LOC_Os04g41500.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P4S|346|LOC_Os04g41500|protein_coding|CODING|LOC_Os04g41500.1|2|1) FN2494.SNP.4:24618516 chr04:024618516 0 W/24618516-24618516 FN2494 SNP T -> G AC=1;AN=200;BQB=0.933393;DP=5194;DP4=2648,2312,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75616e-18;MQSB=0.997972;RPB=0.976625;SGB=137.158;VDB=0.688756;EFF=INTRON(MODIFIER||||876|LOC_Os04g41510|protein_coding|CODING|LOC_Os04g41510.1|5|1) FN3920-S.SNP.4:24620269 chr04:024620269 0 W/24620269-24620269 FN3920-S SNP C -> A AC=1;AN=158;BQB=0.97849;DP=2309;DP4=1153,1056,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.6869e-08;MQSB=0.938989;RPB=0.140627;SGB=51.4366;VDB=0.536049;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C379*|876|LOC_Os04g41510|protein_coding|CODING|LOC_Os04g41510.1|8|1);LOF=(LOC_Os04g41510|LOC_Os04g41510|1|1.00);NMD=(LOC_Os04g41510|LOC_Os04g41510|1|1.00) FN2269-S.SNP.4:24624147 chr04:024624147 0 W/24624147-24624147 FN2269-S SNP G -> T AC=1;AN=190;BQB=0.460801;DP=5064;DP4=2198,2537,14,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.62977e-19;MQSB=0.96327;RPB=0.722473;SGB=-5.4677;VDB=0.038698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A761S|876|LOC_Os04g41510|protein_coding|CODING|LOC_Os04g41510.1|17|1) FN1427-S.SNP.4:24625948 chr04:024625948 0 W/24625948-24625948 FN1427-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN3800-S.SNP.4:24630160 chr04:024630160 0 W/24630160-24630160 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.996944;DP=2699;DP4=1141,1443,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00148203;MQB=0.00940334;MQSB=0.733987;RPB=0.870287;SGB=58.2031;VDB=0.513919;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R8H|1362|LOC_Os04g41520|protein_coding|CODING|LOC_Os04g41520.1|1|1) FN2495.SNP.4:24632946 chr04:024632946 0 W/24632946-24632946 FN2495 SNP T -> C AC=1;AN=200;BQB=0.638511;DP=4964;DP4=2412,2321,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82558e-05;MQSB=0.999942;RPB=0.99877;SGB=15.0344;VDB=0.413752;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L249|436|LOC_Os04g41530|protein_coding|CODING|LOC_Os04g41530.1|6|1) FN2794-S.SNP.4:24634842 chr04:024634842 0 W/24634842-24634842 FN2794-S SNP T -> C AC=1;AN=198;BQB=0.657475;DP=4019;DP4=1995,1839,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.59335e-15;MQSB=0.910838;RPB=0.964943;SGB=83.2905;VDB=0.743224;EFF=INTRON(MODIFIER||||436|LOC_Os04g41530|protein_coding|CODING|LOC_Os04g41530.1|10|1) FN428-S.SNP.4:24637602 chr04:024637602 0 W/24637602-24637602 FN428-S Single Base Substitution T-A INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3424-S.SNP.4:24637631 chr04:024637631 0 W/24637631-24637631 FN3424-S SNP C -> T AC=2;AN=184;BQB=0.894655;DP=2715;DP4=1218,1413,16,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.25705e-15;MQSB=0.892217;RPB=0.865964;SGB=116.569;VDB=0.0579051;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.4:24639998 chr04:024639998 0 W/24639998-24639998 FN-306 Single Base Substitution C-A INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2200-S.SNP.4:24641366 chr04:024641366 0 W/24641366-24641366 FN2200-S SNP T -> G AC=1;AN=190;BQB=0.690753;DP=4541;DP4=2333,1966,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000220216;MQB=1.6882e-11;MQSB=0.945375;RPB=0.9528;SGB=64.5316;VDB=0.175202;EFF=UTR_3_PRIME(MODIFIER||156||250|LOC_Os04g41540|protein_coding|CODING|LOC_Os04g41540.1|1|1) FN3516-S.SNP.4:24653230 chr04:024653230 0 W/24653230-24653230 FN3516-S SNP T -> C AC=1;AN=188;BQB=0.83078;DP=3215;DP4=1197,1928,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74249e-08;MQSB=0.972168;RPB=0.771177;SGB=35.9843;VDB=0.679568;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.4:24653259 chr04:024653259 0 W/24653259-24653259 FN-162 Single Base Substitution G-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN3510-S.SNP.4:24654252 chr04:024654252 0 W/24654252-24654252 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.949443;DP=2670;DP4=1232,1357,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.93656e-13;MQSB=0.984897;RPB=0.513077;SGB=11.7114;VDB=0.133344;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.4:24665796 chr04:024665796 0 W/24665796-24665796 FN774-S Single Base Substitution T-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN553-S.SNP.4:24670291 chr04:024670291 0 W/24670291-24670291 FN553-S Single Base Substitution G-A INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN553-S.SNP.4:24670293 chr04:024670293 0 W/24670293-24670293 FN553-S Single Base Substitution G-A INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3440-S.SNP.4:24686294 chr04:024686294 0 W/24686294-24686294 FN3440-S SNP T -> C AC=1;AN=184;BQB=0.367793;DP=1827;DP4=1128,487,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00109469;MQB=0.00142366;MQSB=3.34918e-14;RPB=0.569859;SGB=8.32411;VDB=0.477879;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.4:24694439 chr04:024694439 0 W/24694439-24694439 FN4208-S SNP A -> T AC=1;AN=170;BQB=0.945551;DP=2802;DP4=1113,1588,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.11883e-08;MQSB=0.802979;RPB=0.619393;SGB=41.7633;VDB=0.660271;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.4:24696220 chr04:024696220 0 W/24696220-24696220 W22-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2125-S.SNP.4:24696392 chr04:024696392 0 W/24696392-24696392 FN2125-S SNP A -> G AC=1;AN=168;BQB=0.00217707;DP=3863;DP4=1960,1860,10,21;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.013461;MQB=0.78831;MQSB=0.979631;RPB=0.99898;SGB=-80.6216;VDB=0.900695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.4:24696491 chr04:024696491 0 W/24696491-24696491 FN3783-S SNP T -> C AC=1;AN=190;BQB=0.967745;DP=2541;DP4=1347,1083,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00236128;MQB=6.18824e-05;MQSB=0.900069;RPB=0.184748;SGB=35.4339;VDB=0.563889;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.4:24699676 chr04:024699676 0 W/24699676-24699676 FN4001-S SNP C -> T AC=2;AN=168;BQB=0.791107;DP=1927;DP4=804,955,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.85685e-15;MQSB=0.961077;RPB=0.987161;SGB=118.635;VDB=0.546663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.4:24707342 chr04:024707342 0 W/24707342-24707342 FN1040-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g41670 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN986-S.SNP.4:24710724 chr04:024710724 0 W/24710724-24710724 FN986-S Single Base Substitution C-G INTERGENIC HOMO SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2152-S.SNP.4:24712352 chr04:024712352 0 W/24712352-24712352 FN2152-S SNP C -> T AC=1;AN=168;BQB=0.0894752;DP=3104;DP4=1252,1815,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.97445e-09;MQSB=0.0511303;RPB=0.355693;SGB=-14.9417;VDB=0.393952;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.4:24716803 chr04:024716803 0 W/24716803-24716803 FN_815-4-1 Single Base Substitution T-C Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3310-S.SNP.4:24719524 chr04:024719524 0 W/24719524-24719524 FN3310-S SNP C -> A AC=1;AN=184;BQB=0.987707;DP=2566;DP4=1259,1166,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68309e-05;MQSB=0.970033;RPB=0.0899206;SGB=18.1394;VDB=0.0313397;EFF=INTERGENIC(MODIFIER||||||||||1) FN1276-S.SNP.4:24724607 chr04:024724607 0 W/24724607-24724607 FN1276-S Single Base Substitution G-A INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN-187.SNP.4:24729127 chr04:024729127 0 W/24729127-24729127 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN799-S.SNP.4:24737302 chr04:024737302 0 W/24737302-24737302 FN799-S Single Base Substitution T-A STOP_GAINED HET LOC_Os04g41730 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN799-S.SNP.4:24737303 chr04:024737303 0 W/24737303-24737303 FN799-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN2313.SNP.4:24738959 chr04:024738959 0 W/24738959-24738959 FN2313 SNP T -> C AC=1;AN=192;BQB=0.513382;DP=4924;DP4=2321,2320,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203087;MQB=6.52703e-16;MQSB=0.630342;RPB=0.544832;SGB=113.111;VDB=0.225866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.4:24750525 chr04:024750525 0 W/24750525-24750525 FN1200-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN846-S.SNP.4:24760587 chr04:024760587 0 W/24760587-24760587 FN846-S Single Base Substitution A-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2648-S.SNP.4:24762958 chr04:024762958 0 W/24762958-24762958 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.684981;DP=4890;DP4=2398,2233,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35171e-06;MQSB=0.565036;RPB=0.133586;SGB=29.4541;VDB=0.406085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.4:24769337 chr04:024769337 0 W/24769337-24769337 FN1461-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. 701-2.SNP.4:24775114 chr04:024775114 0 W/24775114-24775114 701-2 Single Base Substitution A-T INTERGENIC Homo SNo: 1436, Mutant_ID: 701-2, Generation: M2, Mutations: 21, Genes: 34, Seed availability: Yes. 701-3.SNP.4:24775114 chr04:024775114 0 W/24775114-24775114 701-3 Single Base Substitution A-T INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.4:24775114 chr04:024775114 0 W/24775114-24775114 701-3 Single Base Substitution A-T INTERGENIC Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-4.SNP.4:24775114 chr04:024775114 0 W/24775114-24775114 701-4 Single Base Substitution A-T INTERGENIC Homo SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. 701-7.SNP.4:24775114 chr04:024775114 0 W/24775114-24775114 701-7 Single Base Substitution A-T INTERGENIC HET SNo: 1441, Mutant_ID: 701-7, Generation: M2, Mutations: 28, Genes: 9, Seed availability: Yes. FN-52.SNP.4:24784483 chr04:024784483 0 W/24784483-24784483 FN-52 Single Base Substitution G-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN1286-S.SNP.4:24784784 chr04:024784784 0 W/24784784-24784784 FN1286-S Single Base Substitution T-G INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2541-S.SNP.4:24800177 chr04:024800177 0 W/24800177-24800177 FN2541-S SNP A -> G AC=2;AN=198;BQB=0.764074;DP=3964;DP4=1769,1982,23,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.13539e-22;MQSB=0.864083;RPB=0.804625;SGB=140.812;VDB=0.525129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I568V|936|LOC_Os04g41850|protein_coding|CODING|LOC_Os04g41850.1|5|1) FN2621-S.SNP.4:24801460 chr04:024801460 0 W/24801460-24801460 FN2621-S SNP T -> A AC=1;AN=200;BQB=0.729321;DP=4708;DP4=2236,2220,18,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04271e-21;MQSB=0.999373;RPB=0.454458;SGB=46.4088;VDB=0.407871;EFF=UTR_3_PRIME(MODIFIER||42||936|LOC_Os04g41850|protein_coding|CODING|LOC_Os04g41850.1|6|1) FN3479-S.SNP.4:24801888 chr04:024801888 0 W/24801888-24801888 FN3479-S SNP A -> G AC=2;AN=184;BQB=0.801355;DP=3040;DP4=1718,1193,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.09238e-17;MQSB=0.969461;RPB=0.680324;SGB=109.705;VDB=0.495141;EFF=UTR_3_PRIME(MODIFIER||470||936|LOC_Os04g41850|protein_coding|CODING|LOC_Os04g41850.1|6|1) FN-283.SNP.4:24805511 chr04:024805511 0 W/24805511-24805511 FN-283 Single Base Substitution G-A INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2403.SNP.4:24807979 chr04:024807979 0 W/24807979-24807979 FN2403 SNP A -> C AC=1;AN=200;BQB=0.959687;DP=4780;DP4=1934,2563,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.6876e-13;MQSB=0.527627;RPB=0.991105;SGB=76.3213;VDB=0.905306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.4:24808994 chr04:024808994 0 W/24808994-24808994 FN1254-S Single Base Substitution A-G INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN4031-S.SNP.4:24809387 chr04:024809387 0 W/24809387-24809387 FN4031-S SNP T -> C AC=2;AN=168;BQB=0.955366;DP=2658;DP4=1263,1286,14,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.77255e-16;MQSB=0.249117;RPB=0.621947;SGB=123.066;VDB=0.61935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.4:24810089 chr04:024810089 0 W/24810089-24810089 FN2286 SNP C -> A AC=1;AN=192;BQB=0.920765;DP=5156;DP4=2257,2510,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.36485e-10;MQSB=0.913843;RPB=0.97173;SGB=31.4783;VDB=0.780269;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.4:24814171 chr04:024814171 0 W/24814171-24814171 FN980-S Single Base Substitution G-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-336.SNP.4:24818122 chr04:024818122 0 W/24818122-24818122 FN-336 Single Base Substitution G-A INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN3930-S.SNP.4:24822094 chr04:024822094 0 W/24822094-24822094 FN3930-S SNP C -> T AC=2;AN=158;BQB=0.988878;DP=2123;DP4=1163,865,18,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.8834e-13;MQSB=0.0709605;RPB=0.810454;SGB=121.348;VDB=0.0348222;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A198|219|LOC_Os04g41880|protein_coding|CODING|LOC_Os04g41880.1|2|1) FN536-S.SNP.4:24822094 chr04:024822094 0 W/24822094-24822094 FN536-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.4:24822094 chr04:024822094 0 W/24822094-24822094 FN727-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.4:24822094 chr04:024822094 0 W/24822094-24822094 FN867-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2237-S.SNP.4:24823248 chr04:024823248 0 W/24823248-24823248 FN2237-S SNP C -> T AC=1;AN=190;BQB=0.0992424;DP=3856;DP4=1896,1701,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.86221e-10;MQSB=0.353977;RPB=0.895099;SGB=82.301;VDB=0.489826;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A16T|219|LOC_Os04g41880|protein_coding|CODING|LOC_Os04g41880.1|1|1) FN-71.SNP.4:24825895 chr04:024825895 0 W/24825895-24825895 FN-71 Single Base Substitution C-T INTRON HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN2279-S.SNP.4:24825895 chr04:024825895 0 W/24825895-24825895 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.998103;DP=4521;DP4=2384,1824,29,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.37013e-24;MQSB=0.976281;RPB=0.7146;SGB=249.466;VDB=0.89128;EFF=INTRON(MODIFIER||||182|LOC_Os04g41890|protein_coding|CODING|LOC_Os04g41890.1|4|1) FN753-S.SNP.4:24840843 chr04:024840843 0 W/24840843-24840843 FN753-S Single Base Substitution C-A INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN3535-S.SNP.4:24841602 chr04:024841602 0 W/24841602-24841602 FN3535-S SNP T -> C AC=1;AN=188;BQB=0.901258;DP=2528;DP4=1273,1172,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.53132e-06;MQSB=0.951559;RPB=0.993247;SGB=35.3493;VDB=0.482258;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K127E|127|LOC_Os04g41920|protein_coding|CODING|LOC_Os04g41920.1|4|1) FN2593-S.SNP.4:24848174 chr04:024848174 0 W/24848174-24848174 FN2593-S SNP G -> A AC=2;AN=198;BQB=0.0376699;DP=4305;DP4=1878,2155,32,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.15254e-36;MQSB=0.919799;RPB=0.995081;SGB=238.135;VDB=0.3803;EFF=INTRON(MODIFIER||||753|LOC_Os04g41950|protein_coding|CODING|LOC_Os04g41950.1|12|1) FN2592-S.SNP.4:24861065 chr04:024861065 0 W/24861065-24861065 FN2592-S SNP G -> A AC=1;AN=198;BQB=0.967902;DP=3963;DP4=1884,1841,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.63938e-10;MQSB=0.765366;RPB=0.781868;SGB=81.7147;VDB=0.749266;EFF=INTERGENIC(MODIFIER||||||||||1) FN574-S.SNP.4:24872638 chr04:024872638 0 W/24872638-24872638 FN574-S Single Base Substitution C-T INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2449.SNP.4:24880799 chr04:024880799 0 W/24880799-24880799 FN2449 SNP A -> G AC=2;AN=200;BQB=0.996899;DP=4897;DP4=2488,2127,21,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.79154e-24;MQSB=0.998164;RPB=0.21155;SGB=173.999;VDB=0.322904;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y107H|221|LOC_Os04g42000|protein_coding|CODING|LOC_Os04g42000.1|3|1) FN1351-S.SNP.4:24893857 chr04:024893857 0 W/24893857-24893857 FN1351-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2300.SNP.4:24893857 chr04:024893857 0 W/24893857-24893857 FN2300 SNP T -> G AC=1;AN=192;BQB=0.218118;DP=5146;DP4=2371,2484,4,14;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00330354;MQB=0.00498631;MQSB=4.4139e-08;RPB=0.501209;SGB=31.4783;VDB=0.672706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.4:24893857 chr04:024893857 0 W/24893857-24893857 FN2539-S SNP T -> G AC=1;AN=198;BQB=0.378744;DP=4527;DP4=2120,2225,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00331345;MQB=0.00724474;MQSB=2.82991e-07;RPB=0.971702;SGB=67.9293;VDB=0.819915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.4:24901277 chr04:024901277 0 W/24901277-24901277 FN2235-S SNP G -> T AC=1;AN=190;BQB=0.998529;DP=4204;DP4=1854,1979,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000237869;MQB=5.0136e-09;MQSB=0.518407;RPB=0.80814;SGB=4.11112;VDB=0.687803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.4:24901550 chr04:024901550 0 W/24901550-24901550 FN1046-S Single Base Substitution C-G INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1075-S.SNP.4:24906049 chr04:024906049 0 W/24906049-24906049 FN1075-S Single Base Substitution A-T INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1416-S.SNP.4:24915303 chr04:024915303 0 W/24915303-24915303 FN1416-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3610-S.SNP.4:24920365 chr04:024920365 0 W/24920365-24920365 FN3610-S SNP G -> A AC=2;AN=190;BQB=0.587491;DP=2962;DP4=1486,1307,19,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.76803e-14;MQSB=0.763116;RPB=0.986099;SGB=131.065;VDB=0.995147;EFF=UTR_3_PRIME(MODIFIER||321||508|LOC_Os04g42100|protein_coding|CODING|LOC_Os04g42100.1|4|1) FN1656-S.SNP.4:24923572 chr04:024923572 0 W/24923572-24923572 FN1656-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1690-S.SNP.4:24928817 chr04:024928817 0 W/24928817-24928817 FN1690-S SNP T -> C AC=1;AN=188;BQB=0.186931;DP=2977;DP4=1808,1124,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000335909;MQB=1.55109e-05;MQSB=0.996679;RPB=0.379164;SGB=-88.8972;VDB=0.722948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.4:24930135 chr04:024930135 0 W/24930135-24930135 FN2419 SNP G -> A AC=1;AN=200;BQB=0.999891;DP=3348;DP4=1278,1864,6,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000896057;MQB=0.000298534;MQSB=1.65821e-05;RPB=0.345408;SGB=25.849;VDB=0.165106;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.4:24944748 chr04:024944748 0 W/24944748-24944748 FN1548-S SNP C -> G AC=1;AN=188;BQB=0.903703;DP=2789;DP4=800,1956,3,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.41659e-09;MQSB=0.843797;RPB=0.999464;SGB=26.0762;VDB=0.940417;EFF=INTRON(MODIFIER||||73|LOC_Os04g42134|protein_coding|CODING|LOC_Os04g42134.1|1|1) FN2129-S.SNP.4:24947576 chr04:024947576 0 W/24947576-24947576 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.00573379;DP=3293;DP4=1753,1487,19,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92438e-10;MQSB=0.972163;RPB=0.848107;SGB=-82.1908;VDB=0.796064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M487I|793|LOC_Os04g42140|protein_coding|CODING|LOC_Os04g42140.1|9|1) FN3788-S.SNP.4:24947603 chr04:024947603 0 W/24947603-24947603 FN3788-S SNP A -> G AC=2;AN=190;BQB=0.806884;DP=2696;DP4=1113,1481,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.65199e-13;MQSB=0.992681;RPB=0.463838;SGB=64.5316;VDB=0.424525;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G478|793|LOC_Os04g42140|protein_coding|CODING|LOC_Os04g42140.1|9|1) FN2276-S.SNP.4:24950897 chr04:024950897 0 W/24950897-24950897 FN2276-S SNP G -> C AC=2;AN=190;BQB=0.999937;DP=5258;DP4=2488,2388,29,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.04004e-32;MQSB=0.778204;RPB=0.418097;SGB=84.9127;VDB=0.768726;EFF=INTRON(MODIFIER||||793|LOC_Os04g42140|protein_coding|CODING|LOC_Os04g42140.1|2|1) FN808-S.SNP.4:24951980 chr04:024951980 0 W/24951980-24951980 FN808-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g42140 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN471-S.SNP.4:24953639 chr04:024953639 0 W/24953639-24953639 FN471-S Single Base Substitution T-C INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN948-S.SNP.4:24954339 chr04:024954339 0 W/24954339-24954339 FN948-S Single Base Substitution T-C INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN456-S.SNP.4:24957348 chr04:024957348 0 W/24957348-24957348 FN456-S Single Base Substitution T-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN456-S.SNP.4:24957349 chr04:024957349 0 W/24957349-24957349 FN456-S Single Base Substitution T-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1020-S.SNP.4:24958089 chr04:024958089 0 W/24958089-24958089 FN1020-S Single Base Substitution G-A INTERGENIC HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN_772-3-1.SNP.4:24960262 chr04:024960262 0 W/24960262-24960262 FN_772-3-1 Single Base Substitution C-T Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2531-S.SNP.4:24972508 chr04:024972508 0 W/24972508-24972508 FN2531-S SNP G -> T AC=1;AN=198;BQB=0.542099;DP=3820;DP4=1816,1692,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.65163e-12;MQSB=0.469608;RPB=0.998034;SGB=95.5;VDB=0.323957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.4:24974812 chr04:024974812 0 W/24974812-24974812 FN3357-S SNP A -> T AC=1;AN=184;BQB=0.411136;DP=2975;DP4=1255,1623,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.01609e-05;MQSB=0.796434;RPB=0.780887;SGB=28.7043;VDB=0.998585;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.4:24989812 chr04:024989812 0 W/24989812-24989812 FN625-S Single Base Substitution C-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3521-S.SNP.4:24997680 chr04:024997680 0 W/24997680-24997680 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.968148;DP=2899;DP4=1387,1449,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33944e-06;MQSB=0.785044;RPB=0.567282;SGB=25.3545;VDB=0.0581052;EFF=INTRON(MODIFIER||||442|LOC_Os04g42250|protein_coding|CODING|LOC_Os04g42250.2|2|1),INTRON(MODIFIER||||442|LOC_Os04g42250|protein_coding|CODING|LOC_Os04g42250.3|2|1),INTRON(MODIFIER||||442|LOC_Os04g42250|protein_coding|CODING|LOC_Os04g42250.4|2|1) W554-1-1.SNP.4:24998190 chr04:024998190 0 W/24998190-24998190 W554-1-1 Single Base Substitution G-A INTRON HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. W470-2-1.SNP.4:24999518 chr04:024999518 0 W/24999518-24999518 W470-2-1 Single Base Substitution A-T UTR_3_PRIME HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3563-S.SNP.4:25014462 chr04:025014462 0 W/25014462-25014462 FN3563-S SNP A -> C AC=1;AN=188;BQB=0.997688;DP=2263;DP4=1395,800,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.76885e-11;MQSB=0.832418;RPB=0.890399;SGB=50.1574;VDB=0.86747;EFF=INTRON(MODIFIER||||428|LOC_Os04g42280|protein_coding|CODING|LOC_Os04g42280.1|4|1) FN3563-S.SNP.4:25014480 chr04:025014480 0 W/25014480-25014480 FN3563-S SNP G -> A AC=1;AN=188;BQB=0.977933;DP=2224;DP4=1334,848,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.42729e-12;MQSB=0.840062;RPB=0.967077;SGB=76.2387;VDB=0.961777;EFF=INTRON(MODIFIER||||428|LOC_Os04g42280|protein_coding|CODING|LOC_Os04g42280.1|4|1) FN3391-S.SNP.4:25038766 chr04:025038766 0 W/25038766-25038766 FN3391-S SNP A -> G AC=1;AN=184;BQB=0.944896;DP=3157;DP4=1560,1471,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02943e-07;MQSB=0.999756;RPB=0.51638;SGB=28.7043;VDB=0.0521132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.4:25045437 chr04:025045437 0 W/25045437-25045437 FN3347-S SNP C -> T AC=2;AN=184;BQB=0.586972;DP=3386;DP4=1860,1362,30,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000295334;MQB=6.23409e-19;MQSB=0.688594;RPB=0.354804;SGB=193.44;VDB=0.237707;EFF=INTRON(MODIFIER||||846|LOC_Os04g42320|protein_coding|CODING|LOC_Os04g42320.1|1|1) FN2223-S.SNP.4:25047376 chr04:025047376 0 W/25047376-25047376 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.808741;DP=4821;DP4=2220,2324,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.71778e-06;MQSB=0.570468;RPB=0.993189;SGB=49.0954;VDB=0.383963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.4:25056418 chr04:025056418 0 W/25056418-25056418 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.468335;DP=3756;DP4=1727,1789,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.83268e-09;MQSB=0.976619;RPB=0.998992;SGB=95.5;VDB=0.209749;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.4:25057928 chr04:025057928 0 W/25057928-25057928 FN4069-S SNP A -> C AC=1;AN=182;BQB=0.744085;DP=2943;DP4=1367,1467,21,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.01717e-21;MQSB=0.997403;RPB=0.995226;SGB=152.372;VDB=0.25899;EFF=INTRON(MODIFIER||||196|LOC_Os04g42340|protein_coding|CODING|LOC_Os04g42340.1|2|1) FN-298.SNP.4:25061859 chr04:025061859 0 W/25061859-25061859 FN-298 Single Base Substitution C-A INTRON HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN902-S.SNP.4:25064519 chr04:025064519 0 W/25064519-25064519 FN902-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g42360 expressed protein SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3968-S.SNP.4:25066811 chr04:025066811 0 W/25066811-25066811 FN3968-S SNP T -> A AC=2;AN=168;BQB=0.998696;DP=2831;DP4=1364,1343,13,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.04067e-15;MQSB=0.977487;RPB=0.182875;SGB=114.204;VDB=0.403683;EFF=UTR_3_PRIME(MODIFIER||24||335|LOC_Os04g42360|protein_coding|CODING|LOC_Os04g42360.1|6|1) FN2475.SNP.4:25067379 chr04:025067379 0 W/25067379-25067379 FN2475 SNP G -> A AC=2;AN=200;BQB=0.493514;DP=4720;DP4=2020,2321,11,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.6908e-12;MQSB=0.97453;RPB=0.992538;SGB=-7.6637;VDB=0.984231;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.4:25068283 chr04:025068283 0 W/25068283-25068283 FN2491 SNP T -> C AC=1;AN=200;BQB=0.321614;DP=4499;DP4=2078,1999,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55281e-05;MQSB=0.785367;RPB=0.983874;SGB=25.849;VDB=0.979666;EFF=INTRON(MODIFIER||||1187|LOC_Os04g42370|protein_coding|CODING|LOC_Os04g42370.1|1|1) FN-335.SNP.4:25068562 chr04:025068562 0 W/25068562-25068562 FN-335 Single Base Substitution A-G INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2299.SNP.4:25073444 chr04:025073444 0 W/25073444-25073444 FN2299 SNP T -> A AC=1;AN=192;BQB=0.432978;DP=5091;DP4=2420,2401,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.33446e-10;MQSB=0.828718;RPB=0.821229;SGB=26.3496;VDB=0.620109;EFF=INTRON(MODIFIER||||1187|LOC_Os04g42370|protein_coding|CODING|LOC_Os04g42370.1|8|1) FN1256-S.SNP.4:25075683 chr04:025075683 0 W/25075683-25075683 FN1256-S Single Base Substitution C-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. W596-1-1.SNP.4:25083863 chr04:025083863 0 W/25083863-25083863 W596-1-1 Single Base Substitution C-G INTRON HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN3821-S.SNP.4:25084877 chr04:025084877 0 W/25084877-25084877 FN3821-S SNP T -> C AC=1;AN=190;BQB=0.989024;DP=2895;DP4=1457,1305,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0366149;MQB=0.0609394;MQSB=0.304928;RPB=0.849455;SGB=-12.1142;VDB=0.77986;EFF=INTRON(MODIFIER||||1356|LOC_Os04g42399|protein_coding|CODING|LOC_Os04g42399.1|7|1) FN555-S.SNP.4:25086619 chr04:025086619 0 W/25086619-25086619 FN555-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g42399 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN414-S.SNP.4:25088817 chr04:025088817 0 W/25088817-25088817 FN414-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g42399 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2495.SNP.4:25089757 chr04:025089757 0 W/25089757-25089757 FN2495 SNP A -> C AC=1;AN=200;BQB=0.299587;DP=4449;DP4=1867,2260,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00105723;MQSB=0.542575;RPB=0.899786;SGB=22.2439;VDB=0.7357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.4:25090929 chr04:025090929 0 W/25090929-25090929 FN2298 SNP T -> A AC=1;AN=192;BQB=0.791016;DP=5312;DP4=2634,2523,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.83831e-14;MQSB=0.650981;RPB=0.876516;SGB=75.4235;VDB=0.131094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.4:25091807 chr04:025091807 0 W/25091807-25091807 FN1385-S Single Base Substitution G-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-200.SNP.4:25093511 chr04:025093511 0 W/25093511-25093511 FN-200 Single Base Substitution A-T INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN402-S.SNP.4:25098577 chr04:025098577 0 W/25098577-25098577 FN402-S Single Base Substitution T-C INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN2441.SNP.4:25099813 chr04:025099813 0 W/25099813-25099813 FN2441 SNP T -> A AC=1;AN=200;BQB=0.811865;DP=4766;DP4=2074,1899,11,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=1.96884e-10;MQSB=0.029558;RPB=0.418101;SGB=19.1209;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.4:25099813 chr04:025099813 0 W/25099813-25099813 FN664-S Single Base Substitution T-A INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN601-S.SNP.4:25102166 chr04:025102166 0 W/25102166-25102166 FN601-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2320.SNP.4:25105591 chr04:025105591 0 W/25105591-25105591 FN2320 SNP G -> A AC=1;AN=192;BQB=0.759681;DP=4920;DP4=2246,2436,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.76171e-08;MQSB=0.963977;RPB=0.82906;SGB=21.2209;VDB=0.656766;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A80T|497|LOC_Os04g42420|protein_coding|CODING|LOC_Os04g42420.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A165T|582|LOC_Os04g42420|protein_coding|CODING|LOC_Os04g42420.1|2|1),INTRON(MODIFIER||||315|LOC_Os04g42420|protein_coding|CODING|LOC_Os04g42420.2|1|1) FN1501-S.SNP.4:25106657 chr04:025106657 0 W/25106657-25106657 FN1501-S Single Base Substitution C-T INTRON Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2166-S.SNP.4:25108756 chr04:025108756 0 W/25108756-25108756 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.413703;DP=2583;DP4=1452,1079,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43668e-07;MQSB=0.781013;RPB=0.782139;SGB=22.1847;VDB=0.331024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.4:25112639 chr04:025112639 0 W/25112639-25112639 FN2438 SNP T -> G AC=2;AN=200;BQB=0.987217;DP=5032;DP4=2634,2082,27,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.94716e-30;MQSB=0.999895;RPB=0.959114;SGB=198.897;VDB=0.850184;EFF=INTRON(MODIFIER||||472|LOC_Os04g42430|protein_coding|CODING|LOC_Os04g42430.1|3|1),INTRON(MODIFIER||||472|LOC_Os04g42430|protein_coding|CODING|LOC_Os04g42430.2|3|1) FN3626-S.SNP.4:25114831 chr04:025114831 0 W/25114831-25114831 FN3626-S SNP T -> G AC=1;AN=190;BQB=0.898711;DP=2873;DP4=1374,1371,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.40485e-07;MQSB=0.868685;RPB=0.864713;SGB=58.2031;VDB=0.915249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L466R|472|LOC_Os04g42430|protein_coding|CODING|LOC_Os04g42430.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L466R|472|LOC_Os04g42430|protein_coding|CODING|LOC_Os04g42430.2|8|1) FN4063-S.SNP.4:25115888 chr04:025115888 0 W/25115888-25115888 FN4063-S SNP C -> T AC=2;AN=168;BQB=0.245896;DP=2624;DP4=1222,1268,17,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000381098;MQB=2.95487e-09;MQSB=0.0601322;RPB=0.870118;SGB=118.635;VDB=0.726161;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.4:25123089 chr04:025123089 0 W/25123089-25123089 FN-220 Single Base Substitution T-C INTERGENIC HOMO SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN3926-S.SNP.4:25123767 chr04:025123767 0 W/25123767-25123767 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.910965;DP=2819;DP4=1293,1424,13,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.89871e-12;MQSB=0.925667;RPB=0.978621;SGB=71.1374;VDB=0.715637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A129V|387|LOC_Os04g42460|protein_coding|CODING|LOC_Os04g42460.1|1|1) FN2701-S.SNP.4:25125977 chr04:025125977 0 W/25125977-25125977 FN2701-S SNP G -> T AC=2;AN=200;BQB=0.141806;DP=4961;DP4=2357,2360,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.91624e-26;MQSB=0.961466;RPB=0.972731;SGB=105.035;VDB=0.38978;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.4:25126469 chr04:025126469 0 W/25126469-25126469 FN_798-4-2 Single Base Substitution C-T Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN630-S.SNP.4:25128510 chr04:025128510 0 W/25128510-25128510 FN630-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2395.SNP.4:25145369 chr04:025145369 0 W/25145369-25145369 FN2395 SNP A -> C AC=1;AN=200;BQB=0.597829;DP=4497;DP4=2182,1980,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.3318e-12;MQSB=0.713413;RPB=0.883001;SGB=69.1109;VDB=0.284248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.4:25145495 chr04:025145495 0 W/25145495-25145495 FN3534-S SNP A -> G AC=2;AN=188;BQB=0.800364;DP=2466;DP4=1208,1180,1,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.42767e-08;MQSB=0.894912;RPB=0.949546;SGB=48.979;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-315.SNP.4:25149271 chr04:025149271 0 W/25149271-25149271 FN-315 Single Base Substitution A-G INTRON HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2093-S.SNP.4:25154066 chr04:025154066 0 W/25154066-25154066 FN2093-S SNP T -> A AC=2;AN=168;BQB=0.196034;DP=3377;DP4=2069,1251,33,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.05298e-24;MQSB=0.999468;RPB=0.22585;SGB=-54.8729;VDB=0.905623;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.4:25161183 chr04:025161183 0 W/25161183-25161183 FN427-S Single Base Substitution T-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3866-S.SNP.4:25163839 chr04:025163839 0 W/25163839-25163839 FN3866-S SNP A -> C AC=1;AN=158;BQB=0.937408;DP=2647;DP4=1105,1429,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.09021e-09;MQSB=0.999519;RPB=0.770045;SGB=37.4429;VDB=0.486279;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.4:25164768 chr04:025164768 0 W/25164768-25164768 FN2187-S SNP A -> T AC=1;AN=190;BQB=0.242343;DP=4992;DP4=2540,2046,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07531e-11;MQSB=0.91984;RPB=0.905416;SGB=68.0854;VDB=0.958299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.4:25188162 chr04:025188162 0 W/25188162-25188162 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.901474;DP=2130;DP4=1066,985,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.76628e-05;MQSB=0.835264;RPB=0.919378;SGB=44.5415;VDB=0.257671;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A94|503|LOC_Os04g42580|protein_coding|CODING|LOC_Os04g42580.1|1|1) FN1317-S.SNP.4:25198236 chr04:025198236 0 W/25198236-25198236 FN1317-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g42600 polyadenylate-binding protein, putative, expressed SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2445.SNP.4:25198838 chr04:025198838 0 W/25198838-25198838 FN2445 SNP G -> A AC=1;AN=200;BQB=0.997515;DP=4923;DP4=2253,2403,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.19585e-12;MQSB=0.999964;RPB=0.497917;SGB=65.5058;VDB=0.598074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T146I|659|LOC_Os04g42600|protein_coding|CODING|LOC_Os04g42600.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T146I|659|LOC_Os04g42600|protein_coding|CODING|LOC_Os04g42600.2|3|1) FN-227.SNP.4:25205047 chr04:025205047 0 W/25205047-25205047 FN-227 Single Base Substitution C-T INTERGENIC HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN1122-S.SNP.4:25207236 chr04:025207236 0 W/25207236-25207236 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1064-S.SNP.4:25207260 chr04:025207260 0 W/25207260-25207260 FN1064-S Single Base Substitution T-C INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2649-S.SNP.4:25207369 chr04:025207369 0 W/25207369-25207369 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.935632;DP=4716;DP4=2514,1848,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60917e-14;MQSB=0.986482;RPB=0.42829;SGB=20.7261;VDB=0.320531;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.4:25207536 chr04:025207536 0 W/25207536-25207536 FN-179 Single Base Substitution C-T INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2373.SNP.4:25214672 chr04:025214672 0 W/25214672-25214672 FN2373 SNP C -> A AC=1;AN=192;BQB=0.093041;DP=5190;DP4=2377,2293,26,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.22932e-18;MQSB=0.565143;RPB=0.850999;SGB=-3.48171;VDB=0.700968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.4:25214673 chr04:025214673 0 W/25214673-25214673 FN2373 SNP C -> A AC=1;AN=192;BQB=0.0421284;DP=5191;DP4=2354,2314,27,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.61132e-20;MQSB=0.548836;RPB=0.999621;SGB=-3.48171;VDB=0.593091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.4:25215301 chr04:025215301 0 W/25215301-25215301 FN2260-S SNP C -> G AC=1;AN=190;BQB=0.963047;DP=3472;DP4=1253,1947,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=7.03206e-05;MQSB=2.84264e-37;RPB=0.929646;SGB=36.1006;VDB=0.550846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.4:25216932 chr04:025216932 0 W/25216932-25216932 FN1494-S Single Base Substitution G-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2423.SNP.4:25219058 chr04:025219058 0 W/25219058-25219058 FN2423 SNP G -> A AC=2;AN=200;BQB=0.714522;DP=4190;DP4=1852,1951,11,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81254e-12;MQSB=0.919295;RPB=0.453031;SGB=27.1468;VDB=0.373811;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V342|454|LOC_Os04g42620|protein_coding|CODING|LOC_Os04g42620.1|1|1) FN4095-S.SNP.4:25220651 chr04:025220651 0 W/25220651-25220651 FN4095-S SNP C -> T AC=1;AN=182;BQB=0.136692;DP=2543;DP4=1082,1211,3,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00208558;MQSB=0.999251;RPB=0.492832;SGB=-17.3992;VDB=0.962459;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.4:25222180 chr04:025222180 0 W/25222180-25222180 FN323-S Single Base Substitution A-G INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2579-S.SNP.4:25227473 chr04:025227473 0 W/25227473-25227473 FN2579-S SNP A -> T AC=1;AN=198;BQB=0.970949;DP=3875;DP4=1661,1949,11,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47223e-16;MQSB=0.994628;RPB=0.78505;SGB=104.861;VDB=0.830276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V106E|233|LOC_Os04g42634|protein_coding|CODING|LOC_Os04g42634.1|3|1) FN3542-S.SNP.4:25227863 chr04:025227863 0 W/25227863-25227863 FN3542-S SNP C -> T AC=1;AN=188;BQB=0.945748;DP=2667;DP4=1216,1371,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.47032e-08;MQSB=0.992453;RPB=0.455275;SGB=2.45162;VDB=0.28301;EFF=INTRON(MODIFIER||||233|LOC_Os04g42634|protein_coding|CODING|LOC_Os04g42634.1|2|1) FN714-S.SNP.4:25228149 chr04:025228149 0 W/25228149-25228149 FN714-S Single Base Substitution G-A INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2568-S.SNP.4:25231167 chr04:025231167 0 W/25231167-25231167 FN2568-S SNP A -> G AC=2;AN=198;BQB=0.457488;DP=4107;DP4=1935,1851,11,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.2552e-13;MQSB=0.94299;RPB=0.16604;SGB=79.6954;VDB=0.655608;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.4:25232268 chr04:025232268 0 W/25232268-25232268 FN-170 Single Base Substitution G-A INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3997-S.SNP.4:25236936 chr04:025236936 0 W/25236936-25236936 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.883204;DP=2076;DP4=1043,961,9,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.87094e-09;MQSB=0.853827;RPB=0.759747;SGB=87.6193;VDB=0.72859;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.4:25241616 chr04:025241616 0 W/25241616-25241616 FN-208 Single Base Substitution G-T INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3949-S.SNP.4:25249516 chr04:025249516 0 W/25249516-25249516 FN3949-S SNP T -> C AC=1;AN=168;BQB=0.949758;DP=2621;DP4=1250,1287,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35474e-09;MQSB=0.923287;RPB=0.325214;SGB=27.0464;VDB=0.257507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.4:25251352 chr04:025251352 0 W/25251352-25251352 FN2658-S SNP C -> T AC=2;AN=200;BQB=0.686759;DP=4482;DP4=2103,2079,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.22351e-26;MQSB=0.7964;RPB=0.303194;SGB=155.635;VDB=0.211477;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.4:25260359 chr04:025260359 0 W/25260359-25260359 FN456-S Single Base Substitution T-C INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN3514-S.SNP.4:25261197 chr04:025261197 0 W/25261197-25261197 FN3514-S SNP G -> T AC=1;AN=188;BQB=0.798053;DP=3384;DP4=1608,1702,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.33928e-10;MQSB=0.999592;RPB=0.794709;SGB=33.7061;VDB=0.863858;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.4:25261423 chr04:025261423 0 W/25261423-25261423 FN1214-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN3422-S.SNP.4:25262560 chr04:025262560 0 W/25262560-25262560 FN3422-S SNP T -> C AC=1;AN=184;BQB=0.983569;DP=5316;DP4=1948,3103,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00263356;MQB=1.22677e-07;MQSB=1.27615e-39;RPB=0.841354;SGB=-68.0942;VDB=0.0161037;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.4:25264511 chr04:025264511 0 W/25264511-25264511 FN525-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3776-S.SNP.4:25265503 chr04:025265503 0 W/25265503-25265503 FN3776-S SNP C -> T AC=1;AN=190;BQB=0.999509;DP=2860;DP4=1326,1453,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0013986;MQB=4.14821e-05;MQSB=3.87482e-20;RPB=0.505433;SGB=71.8647;VDB=0.314718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E42K|592|LOC_Os04g42710|protein_coding|CODING|LOC_Os04g42710.1|1|1) FN1532-S.SNP.4:25274328 chr04:025274328 0 W/25274328-25274328 FN1532-S Single Base Substitution G-T INTERGENIC Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1042-S.SNP.4:25276931 chr04:025276931 0 W/25276931-25276931 FN1042-S Single Base Substitution C-G INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2129-S.SNP.4:25290349 chr04:025290349 0 W/25290349-25290349 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.303986;DP=3960;DP4=2120,1783,25,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00479798;MQB=2.41355e-15;MQSB=0.0715956;RPB=0.775351;SGB=-93.1751;VDB=0.539366;EFF=INTRON(MODIFIER||||1096|LOC_Os04g42730|protein_coding|CODING|LOC_Os04g42730.1|5|1) FN-309.SNP.4:25291110 chr04:025291110 0 W/25291110-25291110 FN-309 Single Base Substitution G-A INTRON HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2711-S.SNP.4:25305650 chr04:025305650 0 W/25305650-25305650 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.232296;DP=5080;DP4=2183,2569,11,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0015748;MQB=1.08834e-14;MQSB=0.828603;RPB=0.292846;SGB=22.3313;VDB=0.263357;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.4:25311541 chr04:025311541 0 W/25311541-25311541 FN1224-S Single Base Substitution T-A INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1224-S.SNP.4:25311542 chr04:025311542 0 W/25311542-25311542 FN1224-S Single Base Substitution T-A INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2354.SNP.4:25336277 chr04:025336277 0 W/25336277-25336277 FN2354 SNP C -> T AC=1;AN=192;BQB=0.349576;DP=5205;DP4=2511,2409,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.76225e-10;MQSB=0.942343;RPB=0.909515;SGB=-63.0652;VDB=0.853923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D173N|1132|LOC_Os04g42784|protein_coding|CODING|LOC_Os04g42784.1|5|1) FN3454-S.SNP.4:25346113 chr04:025346113 0 W/25346113-25346113 FN3454-S SNP C -> A AC=1;AN=184;BQB=0.0720879;DP=3010;DP4=1351,1566,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.63058e-05;MQSB=0.304929;RPB=0.753918;SGB=3.75875;VDB=0.13081;EFF=INTERGENIC(MODIFIER||||||||||1) FN-112.SNP.4:25353224 chr04:025353224 0 W/25353224-25353224 FN-112 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g42840 HEAT repeat family protein, putative, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2784-S.SNP.4:25365810 chr04:025365810 0 W/25365810-25365810 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.993235;DP=4101;DP4=2042,1692,22,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81389e-20;MQSB=0.990007;RPB=0.999447;SGB=-0.743142;VDB=0.943741;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.4:25367743 chr04:025367743 0 W/25367743-25367743 FN837-S Single Base Substitution G-A INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN443-S.SNP.4:25369105 chr04:025369105 0 W/25369105-25369105 FN443-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g42860 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN443-S.SNP.4:25372721 chr04:025372721 0 W/25372721-25372721 FN443-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN443-S.SNP.4:25372722 chr04:025372722 0 W/25372722-25372722 FN443-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g42870 methyltransferase domain containing protein, putative, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3938-S.SNP.4:25379829 chr04:025379829 0 W/25379829-25379829 FN3938-S SNP G -> A AC=2;AN=158;BQB=0.91255;DP=2530;DP4=1223,1229,13,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.016e-11;MQSB=0.994645;RPB=0.74429;SGB=64.3985;VDB=0.781586;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.4:25381082 chr04:025381082 0 W/25381082-25381082 FN753-S Single Base Substitution T-G INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN518-S.SNP.4:25383920 chr04:025383920 0 W/25383920-25383920 FN518-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2480.SNP.4:25391469 chr04:025391469 0 W/25391469-25391469 FN2480 SNP G -> T AC=1;AN=200;BQB=0.837439;DP=5099;DP4=2269,2492,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21128e-14;MQSB=0.247159;RPB=0.651308;SGB=79.9264;VDB=0.787887;EFF=INTRON(MODIFIER||||478|LOC_Os04g42920|protein_coding|CODING|LOC_Os04g42920.1|4|1) FN2607-S.SNP.4:25394964 chr04:025394964 0 W/25394964-25394964 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.3144;DP=4100;DP4=2009,1828,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.79489e-07;MQSB=0.561587;RPB=0.887528;SGB=2.96892;VDB=0.808233;EFF=INTRON(MODIFIER||||478|LOC_Os04g42920|protein_coding|CODING|LOC_Os04g42920.1|14|1) FN2108-S.SNP.4:25406787 chr04:025406787 0 W/25406787-25406787 FN2108-S SNP C -> T AC=1;AN=168;BQB=0.60048;DP=3536;DP4=1603,1905,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.00441e-06;MQSB=0.923295;RPB=0.427653;SGB=4.1907;VDB=0.996029;EFF=INTRON(MODIFIER||||281|LOC_Os04g42950|protein_coding|CODING|LOC_Os04g42950.1|1|1) FN2651-S.SNP.4:25417763 chr04:025417763 0 W/25417763-25417763 FN2651-S SNP C -> A AC=2;AN=200;BQB=0.504599;DP=4907;DP4=2151,2428,38,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000203791;MQB=1.36759e-36;MQSB=0.987204;RPB=0.943458;SGB=300.303;VDB=0.502142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q215K|450|LOC_Os04g42960|protein_coding|CODING|LOC_Os04g42960.1|1|1) FN3296-S.SNP.4:25418680 chr04:025418680 0 W/25418680-25418680 FN3296-S SNP T -> C AC=1;AN=184;BQB=0.938161;DP=3910;DP4=1536,2211,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000255754;MQB=4.56305e-06;MQSB=0.958591;RPB=0.462537;SGB=35.1773;VDB=0.558106;EFF=UTR_3_PRIME(MODIFIER||207||450|LOC_Os04g42960|protein_coding|CODING|LOC_Os04g42960.1|1|1) FN3982-S.SNP.4:25425631 chr04:025425631 0 W/25425631-25425631 FN3982-S SNP A -> G AC=1;AN=168;BQB=0.906739;DP=2595;DP4=1269,1212,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.7788e-10;MQSB=0.957922;RPB=0.788822;SGB=65.4653;VDB=0.8828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V202A|609|LOC_Os04g42980|protein_coding|CODING|LOC_Os04g42980.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V301A|708|LOC_Os04g42980|protein_coding|CODING|LOC_Os04g42980.1|2|1) FN530-S.SNP.4:25430733 chr04:025430733 0 W/25430733-25430733 FN530-S Single Base Substitution A-T INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN587-S.SNP.4:25431633 chr04:025431633 0 W/25431633-25431633 FN587-S Single Base Substitution T-A INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN_N1-202-3.SNP.4:25437415 chr04:025437415 0 W/25437415-25437415 FN_N1-202-3 Single Base Substitution A-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2218-S.SNP.4:25441191 chr04:025441191 0 W/25441191-25441191 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.991895;DP=5173;DP4=2566,2268,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15857e-16;MQSB=0.992108;RPB=0.983407;SGB=64.5217;VDB=0.0181455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.4:25448805 chr04:025448805 0 W/25448805-25448805 FN-94 Single Base Substitution G-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN3380-S.SNP.4:25453134 chr04:025453134 0 W/25453134-25453134 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.979061;DP=2837;DP4=1489,1209,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.56211e-10;MQSB=0.998524;RPB=0.614802;SGB=33.3622;VDB=0.603574;EFF=INTERGENIC(MODIFIER||||||||||1) 703-1.SNP.4:25459019 chr04:025459019 0 W/25459019-25459019 703-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os04g43020 protein kinase, putative, expressed SNo: 1450, Mutant_ID: 703-1, Generation: M2, Mutations: 30, Genes: 28, Seed availability: No. FN1682-S.SNP.4:25464346 chr04:025464346 0 W/25464346-25464346 FN1682-S SNP C -> A AC=1;AN=188;BQB=0.213868;DP=4097;DP4=1931,2110,17,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.01469e-11;MQSB=0.999394;RPB=0.708976;SGB=-41.9316;VDB=0.209278;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I418|870|LOC_Os04g43030|protein_coding|CODING|LOC_Os04g43030.1|7|1) FN3580-S.SNP.4:25473317 chr04:025473317 0 W/25473317-25473317 FN3580-S SNP T -> C AC=1;AN=188;BQB=0.795394;DP=2592;DP4=1208,1271,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.06143e-10;MQSB=0.728916;RPB=0.451152;SGB=26.0762;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.4:25480618 chr04:025480618 0 W/25480618-25480618 FN2674-S SNP C -> A AC=2;AN=200;BQB=0.475891;DP=4674;DP4=2538,1895,24,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.7876e-29;MQSB=0.686315;RPB=0.774129;SGB=220.051;VDB=0.652239;EFF=INTRON(MODIFIER||||959|LOC_Os04g43050|protein_coding|CODING|LOC_Os04g43050.4|1|1),INTRON(MODIFIER||||1591|LOC_Os04g43050|protein_coding|CODING|LOC_Os04g43050.1|14|1) FN3838-S.SNP.4:25481163 chr04:025481163 0 W/25481163-25481163 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.978562;DP=2792;DP4=1321,1357,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.75103e-07;MQSB=0.96389;RPB=0.127065;SGB=39.9877;VDB=0.549935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P563L|1591|LOC_Os04g43050|protein_coding|CODING|LOC_Os04g43050.1|13|1) FN3844-S.SNP.4:25489281 chr04:025489281 0 W/25489281-25489281 FN3844-S SNP T -> A AC=1;AN=190;BQB=0.738728;DP=2874;DP4=1389,1378,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.64899e-07;MQSB=0.228333;RPB=0.486195;SGB=43.2083;VDB=0.472389;EFF=INTERGENIC(MODIFIER||||||||||1) FN-51.SNP.4:25493757 chr04:025493757 0 W/25493757-25493757 FN-51 Single Base Substitution A-G INTERGENIC HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. W278-3-1.SNP.4:25496025 chr04:025496025 0 W/25496025-25496025 W278-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-192.SNP.4:25498392 chr04:025498392 0 W/25498392-25498392 FN-192 Single Base Substitution T-C INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1330-S.SNP.4:25499016 chr04:025499016 0 W/25499016-25499016 FN1330-S Single Base Substitution T-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN-371.SNP.4:25502489 chr04:025502489 0 W/25502489-25502489 FN-371 Single Base Substitution A-T UTR_3_PRIME HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3804-S.SNP.4:25508151 chr04:025508151 0 W/25508151-25508151 FN3804-S SNP T -> A AC=1;AN=190;BQB=0.792138;DP=2539;DP4=1105,1307,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28253e-11;MQSB=0.70159;RPB=0.976334;SGB=80.9724;VDB=0.832201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.4:25508279 chr04:025508279 0 W/25508279-25508279 FN3466-S SNP T -> C AC=2;AN=184;BQB=0.980746;DP=2967;DP4=1603,1131,26,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.10393e-19;MQSB=0.810448;RPB=0.506973;SGB=44.847;VDB=0.0480013;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.4:25520028 chr04:025520028 0 W/25520028-25520028 FN2432 SNP T -> G AC=1;AN=200;BQB=0.907511;DP=5083;DP4=2817,2058,16,12;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0497738;MQB=0.344281;MQSB=0;RPB=0.702859;SGB=90.7419;VDB=0.286904;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.4:25527144 chr04:025527144 0 W/25527144-25527144 FN-301 Single Base Substitution G-A UTR_5_PRIME HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2103-S.SNP.4:25527492 chr04:025527492 0 W/25527492-25527492 FN2103-S SNP G -> T AC=2;AN=168;BQB=0.960045;DP=3605;DP4=1999,1530,29,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.09836e-23;MQSB=0.976115;RPB=0.343178;SGB=49.9768;VDB=0.626559;EFF=INTRON(MODIFIER||||793|LOC_Os04g43130|protein_coding|CODING|LOC_Os04g43130.1|3|1) FN488-S.SNP.4:25532159 chr04:025532159 0 W/25532159-25532159 FN488-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g43130 transcriptional corepressor LEUNIG, putative, expressed SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2108-S.SNP.4:25536255 chr04:025536255 0 W/25536255-25536255 FN2108-S SNP G -> A AC=1;AN=168;BQB=0.712713;DP=3802;DP4=1887,1877,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.76498e-09;MQSB=0.984045;RPB=0.729468;SGB=36.7696;VDB=0.332871;EFF=INTRON(MODIFIER||||832|LOC_Os04g43140|protein_coding|CODING|LOC_Os04g43140.1|12|1) FN1068-S.SNP.4:25547767 chr04:025547767 0 W/25547767-25547767 FN1068-S Single Base Substitution C-T INTRON HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2451.SNP.4:25552161 chr04:025552161 0 W/25552161-25552161 FN2451 SNP T -> A AC=1;AN=200;BQB=0.821028;DP=5242;DP4=2671,2288,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.8339e-19;MQSB=0.941504;RPB=0.986967;SGB=132.552;VDB=0.138214;EFF=INTRON(MODIFIER||||434|LOC_Os04g43164|protein_coding|CODING|LOC_Os04g43164.1|3|1),INTRON(MODIFIER||||313|LOC_Os04g43164|protein_coding|CODING|LOC_Os04g43164.2|3|1) FN3436-S.SNP.4:25559301 chr04:025559301 0 W/25559301-25559301 FN3436-S SNP G -> C AC=1;AN=184;BQB=0.706438;DP=3754;DP4=1702,1900,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91938e-15;MQSB=0.618561;RPB=0.826025;SGB=78.0093;VDB=0.45794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R50G|145|LOC_Os04g43180|protein_coding|CODING|LOC_Os04g43180.1|1|1) FN2083-S.SNP.4:25560512 chr04:025560512 0 W/25560512-25560512 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.53449;DP=2804;DP4=1194,1440,21,96;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00606277;MQB=0;MQSB=0.670765;RPB=0.0113113;SGB=-1241.17;VDB=0.255389;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.4:25561761 chr04:025561761 0 W/25561761-25561761 FN2607-S SNP G -> A AC=1;AN=198;BQB=0.868873;DP=3522;DP4=1581,1743,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.28605e-06;MQSB=0.528543;RPB=0.445328;SGB=40.3588;VDB=0.0919998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G40R|179|LOC_Os04g43190|protein_coding|CODING|LOC_Os04g43190.1|1|1) FN2165-S.SNP.4:25572883 chr04:025572883 0 W/25572883-25572883 FN2165-S SNP G -> T AC=2;AN=168;BQB=0.0259465;DP=2720;DP4=1588,1053,22,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.0276e-14;MQSB=0.819465;RPB=0.0332964;SGB=-126.323;VDB=0.0195846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.4:25577574 chr04:025577574 0 W/25577574-25577574 FN2146-S SNP C -> T AC=1;AN=168;BQB=0.0236362;DP=3562;DP4=1616,1908,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.49413e-06;MQSB=0.945503;RPB=0.565583;SGB=-14.9417;VDB=0.203841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G210E|730|LOC_Os04g43220|protein_coding|CODING|LOC_Os04g43220.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G210E|705|LOC_Os04g43220|protein_coding|CODING|LOC_Os04g43220.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G210E|705|LOC_Os04g43220|protein_coding|CODING|LOC_Os04g43220.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G210E|636|LOC_Os04g43220|protein_coding|CODING|LOC_Os04g43220.4|1|1) FN3480-S.SNP.4:25579724 chr04:025579724 0 W/25579724-25579724 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.794147;DP=3333;DP4=1604,1641,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07799e-09;MQSB=0.766724;RPB=0.269388;SGB=60.4004;VDB=0.0807461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.4:25581441 chr04:025581441 0 W/25581441-25581441 FN1380-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g43230 expressed protein SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1380-S.SNP.4:25581442 chr04:025581442 0 W/25581442-25581442 FN1380-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g43230 expressed protein SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN480-S.SNP.4:25585576 chr04:025585576 0 W/25585576-25585576 FN480-S Single Base Substitution G-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. W464-2-1.SNP.4:25588349 chr04:025588349 0 W/25588349-25588349 W464-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g43250 retrotransposon protein, putative, unclassified, expressed SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN3574-S.SNP.4:25590976 chr04:025590976 0 W/25590976-25590976 FN3574-S SNP A -> T AC=2;AN=188;BQB=0.675759;DP=3038;DP4=1497,1438,20,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.61082e-17;MQSB=0.998636;RPB=0.869577;SGB=144.388;VDB=0.744554;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.4:25595922 chr04:025595922 0 W/25595922-25595922 FN517-S Single Base Substitution A-G INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN1042-S.SNP.4:25601874 chr04:025601874 0 W/25601874-25601874 FN1042-S Single Base Substitution G-T INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN_777-2-1.SNP.4:25603094 chr04:025603094 0 W/25603094-25603094 FN_777-2-1 Single Base Substitution A-G Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1746-S.SNP.4:25605032 chr04:025605032 0 W/25605032-25605032 FN1746-S SNP G -> A AC=1;AN=188;BQB=0.0379825;DP=3042;DP4=1657,1349,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30133e-10;MQSB=0.990354;RPB=0.655734;SGB=-38.278;VDB=0.669361;EFF=START_GAINED(LOW||||507|LOC_Os04g43270|protein_coding|CODING|LOC_Os04g43270.1|2|1),UTR_5_PRIME(MODIFIER||218||507|LOC_Os04g43270|protein_coding|CODING|LOC_Os04g43270.1|2|1) FN-170.SNP.4:25608256 chr04:025608256 0 W/25608256-25608256 FN-170 Single Base Substitution C-G UTR_3_PRIME HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3698-S.SNP.4:25617009 chr04:025617009 0 W/25617009-25617009 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.985413;DP=2829;DP4=1300,1390,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.32065e-07;MQSB=0.998988;RPB=0.996805;SGB=28.9929;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.4:25617926 chr04:025617926 0 W/25617926-25617926 FN483-S Single Base Substitution C-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3796-S.SNP.4:25648511 chr04:025648511 0 W/25648511-25648511 FN3796-S SNP T -> A AC=2;AN=190;BQB=0.79244;DP=2468;DP4=987,1293,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.96943e-11;MQSB=0.0939422;RPB=0.698895;SGB=-37.2167;VDB=0.244876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.4:25652743 chr04:025652743 0 W/25652743-25652743 FN1045-S Single Base Substitution C-A INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2688-S.SNP.4:25655565 chr04:025655565 0 W/25655565-25655565 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.836992;DP=4399;DP4=2229,1928,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000227324;MQB=3.16682e-07;MQSB=0.389402;RPB=0.535273;SGB=-16.1361;VDB=0.223892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.4:25656932 chr04:025656932 0 W/25656932-25656932 FN3632-S SNP G -> A AC=2;AN=190;BQB=0.162049;DP=2940;DP4=1234,1254,15,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.47531e-16;MQSB=0.944678;RPB=0.0413692;SGB=-94.9153;VDB=0.987833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.4:25657043 chr04:025657043 0 W/25657043-25657043 FN2472 SNP T -> G AC=2;AN=200;BQB=0.987471;DP=4029;DP4=2710,1020,32,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.0064e-20;MQSB=0.488939;RPB=0.922631;SGB=173.999;VDB=0.784108;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.4:25657269 chr04:025657269 0 W/25657269-25657269 FN4181-S SNP G -> T AC=1;AN=170;BQB=0.939916;DP=2323;DP4=955,1281,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000232874;MQSB=0.982189;RPB=0.145244;SGB=30.1021;VDB=0.116387;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.4:25668861 chr04:025668861 0 W/25668861-25668861 FN530-S Single Base Substitution G-T INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. CW-631-3-1.SNP.4:25671480 chr04:025671480 0 W/25671480-25671480 CW-631-3-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN419-S.SNP.4:25677486 chr04:025677486 0 W/25677486-25677486 FN419-S Single Base Substitution G-A INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2617-S.SNP.4:25678209 chr04:025678209 0 W/25678209-25678209 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.167456;DP=3243;DP4=1569,1457,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0021585;MQB=0.00331502;MQSB=9.57254e-08;RPB=0.245971;SGB=61.7198;VDB=0.37431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.4:25683360 chr04:025683360 0 W/25683360-25683360 FN2553-S SNP A -> G AC=1;AN=198;BQB=0.332977;DP=4543;DP4=1997,2221,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00198107;MQB=7.02041e-07;MQSB=4.03138e-06;RPB=0.919757;SGB=43.7442;VDB=0.253349;EFF=INTRON(MODIFIER||||505|LOC_Os04g43410|protein_coding|CODING|LOC_Os04g43410.1|11|1) FN-51.SNP.4:25685738 chr04:025685738 0 W/25685738-25685738 FN-51 Single Base Substitution T-A INTRON HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3809-S.SNP.4:25689588 chr04:025689588 0 W/25689588-25689588 FN3809-S SNP T -> C AC=1;AN=190;BQB=0.378734;DP=3166;DP4=1674,1378,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.69272e-07;MQSB=0.141346;RPB=0.827747;SGB=-15.9914;VDB=0.695;EFF=INTRON(MODIFIER||||505|LOC_Os04g43410|protein_coding|CODING|LOC_Os04g43410.1|1|1) FN696-S.SNP.4:25691711 chr04:025691711 0 W/25691711-25691711 FN696-S Single Base Substitution G-A INTRON HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1455-S.SNP.4:25694895 chr04:025694895 0 W/25694895-25694895 FN1455-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2243-S.SNP.4:25712365 chr04:025712365 0 W/25712365-25712365 FN2243-S SNP C -> T AC=1;AN=190;BQB=0.368344;DP=4593;DP4=2254,2021,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000217723;MQB=2.3676e-06;MQSB=0.550528;RPB=0.890552;SGB=26.2136;VDB=0.778029;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G57R|908|LOC_Os04g43440|protein_coding|CODING|LOC_Os04g43440.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G57R|87|LOC_Os04g43440|protein_coding|CODING|LOC_Os04g43440.2|1|1) FN783-S.SNP.4:25712756 chr04:025712756 0 W/25712756-25712756 FN783-S Single Base Substitution C-T INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2542-S.SNP.4:25714050 chr04:025714050 0 W/25714050-25714050 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.311843;DP=4126;DP4=1850,2108,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242365;MQB=3.73955e-09;MQSB=0.907362;RPB=0.85187;SGB=67.9293;VDB=0.86937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C294Y|459|LOC_Os04g43450|protein_coding|CODING|LOC_Os04g43450.1|1|1) FN3830-S.SNP.4:25720165 chr04:025720165 0 W/25720165-25720165 FN3830-S SNP G -> T AC=1;AN=190;BQB=0.935361;DP=3130;DP4=1622,1392,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000319489;MQB=2.27887e-07;MQSB=0.953253;RPB=0.599943;SGB=18.552;VDB=0.286399;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P1059|1324|LOC_Os04g43464|protein_coding|CODING|LOC_Os04g43464.1|8|1) FN2468.SNP.4:25726052 chr04:025726052 0 W/25726052-25726052 FN2468 SNP T -> C AC=2;AN=200;BQB=0.502936;DP=4430;DP4=1995,1983,17,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08799e-16;MQSB=0.614213;RPB=0.999531;SGB=73.7728;VDB=0.158022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.4:25729965 chr04:025729965 0 W/25729965-25729965 FN2729-S SNP A -> T AC=1;AN=200;BQB=0.580554;DP=4979;DP4=2296,2530,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.43855e-07;MQSB=0.981609;RPB=0.702655;SGB=21.6694;VDB=0.654031;EFF=INTRON(MODIFIER||||454|LOC_Os04g43490|protein_coding|CODING|LOC_Os04g43490.1|5|1),INTRON(MODIFIER||||381|LOC_Os04g43490|protein_coding|CODING|LOC_Os04g43490.2|5|1) FN-327.SNP.4:25730618 chr04:025730618 0 W/25730618-25730618 FN-327 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g43490 CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN902-S.SNP.4:25731148 chr04:025731148 0 W/25731148-25731148 FN902-S Single Base Substitution T-G INTRON HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2441.SNP.4:25736485 chr04:025736485 0 W/25736485-25736485 FN2441 SNP G -> C AC=1;AN=200;BQB=0.997199;DP=5005;DP4=2506,2225,23,34;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.181618;MQB=0.00112127;MQSB=0;RPB=0.0228423;SGB=-851.911;VDB=0.941773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.4:25744086 chr04:025744086 0 W/25744086-25744086 FN3453-S SNP A -> T AC=1;AN=184;BQB=0.812068;DP=3188;DP4=1603,1487,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0159975;MQB=3.31982e-05;MQSB=4.57723e-23;RPB=0.974379;SGB=48.7425;VDB=0.233838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.4:25745576 chr04:025745576 0 W/25745576-25745576 FN3319-S SNP C -> A AC=1;AN=184;BQB=0.99957;DP=3389;DP4=1725,1526,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.95284e-08;MQSB=0.999995;RPB=0.999999;SGB=15.7097;VDB=0.122175;EFF=INTRON(MODIFIER||||351|LOC_Os04g43519|protein_coding|CODING|LOC_Os04g43519.1|1|1) FN3980-S.SNP.4:25748965 chr04:025748965 0 W/25748965-25748965 FN3980-S SNP G -> T AC=1;AN=168;BQB=0.902965;DP=2624;DP4=1188,1298,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.40213e-07;MQSB=0.942498;RPB=0.380784;SGB=43.3113;VDB=0.789499;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.4:25780525 chr04:025780525 0 W/25780525-25780525 FN-218 Single Base Substitution A-G INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2619-S.SNP.4:25788153 chr04:025788153 0 W/25788153-25788153 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.508894;DP=3948;DP4=1886,1802,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.21634e-12;MQSB=0.240266;RPB=0.954184;SGB=94.0758;VDB=0.810594;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.4:25796890 chr04:025796890 0 W/25796890-25796890 FN3697-S SNP A -> G AC=1;AN=190;BQB=0.812864;DP=3293;DP4=1465,1719,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00850288;MQB=0.0287212;MQSB=0.000907956;RPB=0.929554;SGB=36.1006;VDB=0.801046;EFF=INTRON(MODIFIER||||987|LOC_Os04g43590|protein_coding|CODING|LOC_Os04g43590.1|1|1) FN999-S.SNP.4:25798994 chr04:025798994 0 W/25798994-25798994 FN999-S Single Base Substitution C-T INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN999-S.SNP.4:25798996 chr04:025798996 0 W/25798996-25798996 FN999-S Single Base Substitution A-T INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3459-S.SNP.4:25799130 chr04:025799130 0 W/25799130-25799130 FN3459-S SNP C -> A AC=1;AN=184;BQB=0.826803;DP=2537;DP4=1617,822,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.128892;MQB=0.95932;MQSB=0.00723062;RPB=0.442167;SGB=-15.2358;VDB=0.22877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.4:25804780 chr04:025804780 0 W/25804780-25804780 FN1304-S Single Base Substitution A-G INTRON HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2545-S.SNP.4:25807355 chr04:025807355 0 W/25807355-25807355 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.859622;DP=4160;DP4=2246,1656,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.08547e-13;MQSB=0.867937;RPB=0.964852;SGB=95.5;VDB=0.383319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.4:25808687 chr04:025808687 0 W/25808687-25808687 FN3591-S SNP C -> T AC=2;AN=188;BQB=0.721884;DP=2639;DP4=1226,1258,14,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.01236e-13;MQSB=0.00153707;RPB=0.682497;SGB=66.7689;VDB=0.199702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.4:25813436 chr04:025813436 0 W/25813436-25813436 FN1725-S SNP C -> T AC=1;AN=186;BQB=0.315878;DP=3918;DP4=1989,1882,12,14;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=4.02662e-14;MQSB=0.998675;RPB=0.708072;SGB=51.5091;VDB=0.414377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.4:25814028 chr04:025814028 0 W/25814028-25814028 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.864414;DP=4083;DP4=2127,1610,6,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.79137e-11;MQSB=0.996312;RPB=0.998562;SGB=-37.0454;VDB=0.502671;EFF=INTERGENIC(MODIFIER||||||||||1) FN468-S.SNP.4:25819046 chr04:025819046 0 W/25819046-25819046 FN468-S Single Base Substitution G-A INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN4093-S.SNP.4:25832798 chr04:025832798 0 W/25832798-25832798 FN4093-S SNP C -> T AC=1;AN=182;BQB=0.999381;DP=3171;DP4=1451,1628,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.24148e-09;MQSB=0.844448;RPB=0.827415;SGB=46.1603;VDB=0.112371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.4:25833927 chr04:025833927 0 W/25833927-25833927 FN1015-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g43660 expressed protein SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3732-S.SNP.4:25834511 chr04:025834511 0 W/25834511-25834511 FN3732-S SNP T -> C AC=1;AN=190;BQB=0.859856;DP=2608;DP4=1308,1172,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.40734e-08;MQSB=0.838361;RPB=0.994878;SGB=76.4186;VDB=0.303136;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F449|493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN-132.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN-132 Single Base Substitution C-T UTR_3_PRIME HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1119-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN1119-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1198-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN1198-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1262-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN1262-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1660-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN1660-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2181-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN2181-S SNP C -> T AC=2;AN=190;BQB=0.979354;DP=4527;DP4=1840,2378,20,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26386e-20;MQSB=0.972087;RPB=0.215657;SGB=181.158;VDB=0.00618481;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN2532-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN2532-S SNP C -> T AC=2;AN=198;BQB=0.403714;DP=4043;DP4=1674,2142,19,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.36701e-18;MQSB=0.9897;RPB=0.886828;SGB=46.0372;VDB=0.208134;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN3342-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN3342-S SNP C -> T AC=2;AN=184;BQB=0.968281;DP=3272;DP4=1244,1906,12,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.40801e-19;MQSB=0.960593;RPB=0.71317;SGB=134.656;VDB=0.546801;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN3401-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN3401-S SNP C -> T AC=2;AN=184;BQB=0.999756;DP=2981;DP4=1104,1753,13,30;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.87552e-24;MQSB=0.997683;RPB=0.305894;SGB=141.402;VDB=0.415292;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN3771-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN3771-S SNP C -> T AC=2;AN=190;BQB=0.672656;DP=2890;DP4=1187,1586,5,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.96371e-12;MQSB=0.920554;RPB=0.998611;SGB=49.1985;VDB=0.0923507;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN3928-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN3928-S SNP C -> T AC=2;AN=158;BQB=0.984855;DP=2490;DP4=1015,1377,10,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.67631e-15;MQSB=0.821892;RPB=0.965806;SGB=112.609;VDB=0.343453;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN4083-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN4083-S SNP C -> T AC=1;AN=182;BQB=0.920487;DP=3114;DP4=1234,1781,17,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.39853e-17;MQSB=0.920187;RPB=0.709977;SGB=116.285;VDB=0.342084;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN412-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN412-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN4204-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN4204-S SNP C -> T AC=2;AN=170;BQB=0.937875;DP=2632;DP4=1044,1498,13,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.56808e-19;MQSB=0.977928;RPB=0.969223;SGB=132.282;VDB=0.0785958;EFF=UTR_3_PRIME(MODIFIER||88||493|LOC_Os04g43660|protein_coding|CODING|LOC_Os04g43660.1|1|1) FN476-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN476-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN661-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN661-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN797-S.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN797-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN_807-3-1.SNP.4:25834734 chr04:025834734 0 W/25834734-25834734 FN_807-3-1 Single Base Substitution C-T Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1012-S.SNP.4:25845036 chr04:025845036 0 W/25845036-25845036 FN1012-S Single Base Substitution C-T INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2631-S.SNP.4:25852071 chr04:025852071 0 W/25852071-25852071 FN2631-S SNP C -> A AC=1;AN=200;BQB=0.931651;DP=5116;DP4=2871,1934,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1143e-11;MQSB=0.843586;RPB=0.935367;SGB=69.1109;VDB=0.517563;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.4:25855172 chr04:025855172 0 W/25855172-25855172 FN404-S Single Base Substitution T-C INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN_769-4-1.SNP.4:25858679 chr04:025858679 0 W/25858679-25858679 FN_769-4-1 Single Base Substitution G-C HET LOC_Os04g43690 DUF647 domain containing protein, putative, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN-16.SNP.4:25863850 chr04:025863850 0 W/25863850-25863850 FN-16 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os04g43700 glycosyl transferase 8 domain containing protein, putative, expressed SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN3322-S.SNP.4:25877439 chr04:025877439 0 W/25877439-25877439 FN3322-S SNP C -> T AC=2;AN=184;BQB=0.919889;DP=3084;DP4=1514,1467,17,14;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.00616083;MQB=0.00539824;MQSB=2.56564e-08;RPB=0.807712;SGB=63.6237;VDB=0.052252;EFF=UTR_5_PRIME(MODIFIER||1474||632|LOC_Os04g43720|protein_coding|CODING|LOC_Os04g43720.1|2|1) FN-160.SNP.4:25879995 chr04:025879995 0 W/25879995-25879995 FN-160 Single Base Substitution A-T INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2124-S.SNP.4:25881095 chr04:025881095 0 W/25881095-25881095 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.229023;DP=3452;DP4=1840,1559,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.60304e-08;MQSB=0.771058;RPB=0.779453;SGB=-71.2065;VDB=0.728751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.4:25891328 chr04:025891328 0 W/25891328-25891328 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.991721;DP=3890;DP4=1749,1904,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000514139;MQB=2.39978e-05;MQSB=0.000456942;RPB=0.597996;SGB=35.4339;VDB=0.156836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.4:25891329 chr04:025891329 0 W/25891329-25891329 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.99113;DP=3886;DP4=1743,1895,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000514668;MQB=7.77609e-06;MQSB=0.000210025;RPB=0.880169;SGB=39.9877;VDB=0.422799;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.4:25903442 chr04:025903442 0 W/25903442-25903442 FN-87 Single Base Substitution G-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN680-S.SNP.4:25913883 chr04:025913883 0 W/25913883-25913883 FN680-S Single Base Substitution A-T INTRON HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1236-S.SNP.4:25914423 chr04:025914423 0 W/25914423-25914423 FN1236-S Single Base Substitution C-A INTRON HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2545-S.SNP.4:25924254 chr04:025924254 0 W/25924254-25924254 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.276565;DP=3437;DP4=1512,1712,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.08353e-05;MQSB=0.619514;RPB=0.946284;SGB=49.5489;VDB=0.0538265;EFF=INTRON(MODIFIER||||222|LOC_Os04g43790|protein_coding|CODING|LOC_Os04g43790.1|1|1) FN3714-S.SNP.4:25933266 chr04:025933266 0 W/25933266-25933266 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.841668;DP=2790;DP4=1429,1209,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000358423;MQB=3.95598e-14;MQSB=0.72016;RPB=0.723943;SGB=126.511;VDB=0.896794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.4:25938262 chr04:025938262 0 W/25938262-25938262 FN2438 SNP G -> A AC=2;AN=200;BQB=0.982717;DP=4366;DP4=2006,2055,30,24;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00251947;MQB=3.13885e-17;MQSB=0;RPB=0.523147;SGB=184.476;VDB=0.162439;EFF=INTRON(MODIFIER||||361|LOC_Os04g43810|protein_coding|CODING|LOC_Os04g43810.1|1|1) FN2175-S.SNP.4:25940180 chr04:025940180 0 W/25940180-25940180 FN2175-S SNP T -> C AC=2;AN=168;BQB=0.00494797;DP=2950;DP4=1117,1775,15,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.71525e-10;MQSB=0.997921;RPB=0.999498;SGB=-45.7659;VDB=0.811203;EFF=INTRON(MODIFIER||||361|LOC_Os04g43810|protein_coding|CODING|LOC_Os04g43810.1|1|1) FN2217-S.SNP.4:25942517 chr04:025942517 0 W/25942517-25942517 FN2217-S SNP C -> T AC=1;AN=190;BQB=0.147218;DP=4169;DP4=2105,1831,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22503e-11;MQSB=0.0206149;RPB=0.892191;SGB=68.0854;VDB=0.212994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.4:25953808 chr04:025953808 0 W/25953808-25953808 FN2473 SNP A -> G AC=1;AN=200;BQB=0.952677;DP=5300;DP4=2480,2584,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000188679;MQB=4.61405e-07;MQSB=0.453426;RPB=0.990534;SGB=29.4541;VDB=0.945028;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.4:25954990 chr04:025954990 0 W/25954990-25954990 FN1552-S SNP C -> A AC=1;AN=188;BQB=0.000657191;DP=4340;DP4=2225,2075,20,11;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.32711;MQSB=0.870073;RPB=0.189502;SGB=-291.154;VDB=0.723306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.4:25955513 chr04:025955513 0 W/25955513-25955513 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.917841;DP=4598;DP4=2265,2015,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.91896e-10;MQSB=0.805746;RPB=1;SGB=65.3149;VDB=0.975094;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.4:25956671 chr04:025956671 0 W/25956671-25956671 FN3892-S SNP G -> A AC=1;AN=158;BQB=0.999259;DP=2336;DP4=1191,1062,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.0753e-06;MQSB=0.696051;RPB=0.811935;SGB=30.704;VDB=0.090229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.4:25956896 chr04:025956896 0 W/25956896-25956896 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.999996;DP=3871;DP4=2057,1693,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.72034e-10;MQSB=0.925962;RPB=0.985281;SGB=6.80232;VDB=0.212576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.4:25957360 chr04:025957360 0 W/25957360-25957360 FN2356 SNP G -> A AC=2;AN=192;BQB=0.231984;DP=5295;DP4=2643,2263,28,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.36113e-35;MQSB=0.905478;RPB=0.954872;SGB=74.6218;VDB=0.89662;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.4:25966891 chr04:025966891 0 W/25966891-25966891 W42-1-3S-1 Single Base Substitution T-G INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN670-S.SNP.4:25971082 chr04:025971082 0 W/25971082-25971082 FN670-S Single Base Substitution C-T INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3371-S.SNP.4:25975979 chr04:025975979 0 W/25975979-25975979 FN3371-S SNP C -> T AC=2;AN=184;BQB=0.817049;DP=3135;DP4=1462,1563,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.64494e-15;MQSB=0.216621;RPB=0.990821;SGB=107.526;VDB=0.486029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.4:25995022 chr04:025995022 0 W/25995022-25995022 FN2092-S SNP G -> A AC=2;AN=168;BQB=0.655934;DP=2106;DP4=929,1098,17,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.54313e-14;MQSB=0.415711;RPB=0.596215;SGB=114.204;VDB=0.373004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.4:26011238 chr04:026011238 0 W/26011238-26011238 FN3399-S SNP A -> G AC=1;AN=184;BQB=0.984518;DP=2526;DP4=1087,1358,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70762e-11;MQSB=0.999493;RPB=0.769019;SGB=60.4004;VDB=0.570381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.4:26019485 chr04:026019485 0 W/26019485-26019485 FN2692-S SNP T -> G AC=1;AN=200;BQB=0.549906;DP=4973;DP4=2165,2601,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.87414e-13;MQSB=0.97242;RPB=0.492021;SGB=76.3213;VDB=0.865924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.4:26022096 chr04:026022096 0 W/26022096-26022096 FN1315-S Single Base Substitution C-T INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN3325-S.SNP.4:26026166 chr04:026026166 0 W/26026166-26026166 FN3325-S SNP T -> A AC=1;AN=184;BQB=0.692609;DP=2544;DP4=1195,1265,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.31831e-06;MQSB=0.99614;RPB=0.559913;SGB=25.1826;VDB=0.781995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S697C|939|LOC_Os04g43916|protein_coding|CODING|LOC_Os04g43916.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S667C|909|LOC_Os04g43916|protein_coding|CODING|LOC_Os04g43916.2|12|1) FN-114.SNP.4:26032774 chr04:026032774 0 W/26032774-26032774 FN-114 Single Base Substitution A-G INTRON HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2611-S.SNP.4:26037817 chr04:026037817 0 W/26037817-26037817 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.794616;DP=5151;DP4=2412,2503,26,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.75979e-31;MQSB=0.901974;RPB=0.974758;SGB=177.266;VDB=0.750872;EFF=INTRON(MODIFIER||||315|LOC_Os04g43922|protein_coding|CODING|LOC_Os04g43922.1|6|1) FN2386.SNP.4:26039374 chr04:026039374 0 W/26039374-26039374 FN2386 SNP G -> C AC=1;AN=192;BQB=0.633838;DP=5418;DP4=2338,2804,17,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.47306e-18;MQSB=0.997207;RPB=0.197271;SGB=37.0774;VDB=0.345215;EFF=INTRON(MODIFIER||||315|LOC_Os04g43922|protein_coding|CODING|LOC_Os04g43922.1|4|1) FN748-S.SNP.4:26042885 chr04:026042885 0 W/26042885-26042885 FN748-S Single Base Substitution T-C INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN864-S.SNP.4:26048199 chr04:026048199 0 W/26048199-26048199 FN864-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g43930 retrotransposon protein, putative, unclassified SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN4142-S.SNP.4:26056705 chr04:026056705 0 W/26056705-26056705 FN4142-S SNP C -> T AC=1;AN=170;BQB=0.82494;DP=3364;DP4=1403,1884,12,13;HOB=6.92042e-05;ICB=0.000139222;MQ=28;MQ0F=0.16082;MQB=0.0149617;MQSB=5.20953e-15;RPB=0.93556;SGB=105.627;VDB=0.842665;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q1295*|1470|LOC_Os04g43950|protein_coding|CODING|LOC_Os04g43950.1|1|1) FN2315.SNP.4:26062306 chr04:026062306 0 W/26062306-26062306 FN2315 SNP C -> A AC=1;AN=192;BQB=0.471333;DP=4801;DP4=1993,2329,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0254114;MQB=0.0997384;MQSB=0.000128608;RPB=0.350562;SGB=46.8644;VDB=0.0501588;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S226Y|755|LOC_Os04g43970|protein_coding|CODING|LOC_Os04g43970.1|2|1) FN1064-S.SNP.4:26063569 chr04:026063569 0 W/26063569-26063569 FN1064-S Single Base Substitution G-A STOP_GAINED HET LOC_Os04g43970 retrotransposon protein, putative, unclassified, expressed SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN4038-S.SNP.4:26071182 chr04:026071182 0 W/26071182-26071182 FN4038-S SNP C -> T AC=1;AN=168;BQB=0.705;DP=1836;DP4=745,1010,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0827887;MQB=0.911191;MQSB=0.370377;RPB=0.472481;SGB=48.4712;VDB=0.146327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.4:26071730 chr04:026071730 0 W/26071730-26071730 FN1018-S Single Base Substitution C-T INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1239-S.SNP.4:26077566 chr04:026077566 0 W/26077566-26077566 FN1239-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2209-S.SNP.4:26083548 chr04:026083548 0 W/26083548-26083548 FN2209-S SNP G -> T AC=1;AN=190;BQB=3.21649e-05;DP=4382;DP4=2024,2010,6,95;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00616157;MQB=0;MQSB=0.00113693;RPB=4.68873e-23;SGB=-2609.04;VDB=6.1924e-23;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E763*|989|LOC_Os04g44000|protein_coding|CODING|LOC_Os04g44000.1|6|1);LOF=(LOC_Os04g44000|LOC_Os04g44000|1|1.00);NMD=(LOC_Os04g44000|LOC_Os04g44000|1|1.00) FN424-S.SNP.4:26084455 chr04:026084455 0 W/26084455-26084455 FN424-S Single Base Substitution G-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN424-S.SNP.4:26084456 chr04:026084456 0 W/26084456-26084456 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN-182.SNP.4:26084587 chr04:026084587 0 W/26084587-26084587 FN-182 Single Base Substitution C-T INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3798-S.SNP.4:26091360 chr04:026091360 0 W/26091360-26091360 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.914397;DP=3121;DP4=1460,1581,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30655e-06;MQSB=0.991477;RPB=0.898888;SGB=35.4339;VDB=0.171339;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A206|464|LOC_Os04g44030|protein_coding|CODING|LOC_Os04g44030.1|1|1) FN2116-S.SNP.4:26105651 chr04:026105651 0 W/26105651-26105651 FN2116-S SNP A -> T AC=1;AN=168;BQB=0.893053;DP=3801;DP4=2014,1739,11,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76825e-15;MQSB=0.999999;RPB=0.455008;SGB=-42.92;VDB=0.114502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.4:26105652 chr04:026105652 0 W/26105652-26105652 FN2116-S SNP A -> T AC=1;AN=168;BQB=0.766515;DP=3811;DP4=2022,1734,10,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.47113e-15;MQSB=0.997673;RPB=0.67347;SGB=-110.908;VDB=0.404442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.4:26105653 chr04:026105653 0 W/26105653-26105653 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.635297;DP=3828;DP4=2045,1737,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20653e-13;MQSB=0.999622;RPB=0.306551;SGB=44.0621;VDB=0.119437;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.4:26109894 chr04:026109894 0 W/26109894-26109894 FN1666-S SNP G -> A AC=1;AN=188;BQB=0.000194611;DP=4153;DP4=2090,2025,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.5248e-05;MQSB=0.992032;RPB=0.624573;SGB=-160.054;VDB=0.755123;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E488K|771|LOC_Os04g44090|protein_coding|CODING|LOC_Os04g44090.1|1|1) FN-381.SNP.4:26114353 chr04:026114353 0 W/26114353-26114353 FN-381 Single Base Substitution T-A INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2607-S.SNP.4:26119404 chr04:026119404 0 W/26119404-26119404 FN2607-S SNP A -> T AC=1;AN=196;BQB=0.641379;DP=4292;DP4=2317,1753,5,6;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.19155e-07;MQSB=0.93504;RPB=0.797191;SGB=44.9538;VDB=0.85111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.4:26126415 chr04:026126415 0 W/26126415-26126415 FN2215-S SNP C -> T AC=2;AN=190;BQB=0.420358;DP=4404;DP4=1871,2200,22,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000227066;MQB=3.99067e-29;MQSB=0.624449;RPB=0.644132;SGB=125.815;VDB=0.849575;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.4:26126415 chr04:026126415 0 W/26126415-26126415 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1234-S.SNP.4:26134272 chr04:026134272 0 W/26134272-26134272 FN1234-S Single Base Substitution G-A START_GAINED HET LOC_Os04g44150 gibberellin 2-beta-dioxygenase 7, putative, expressed SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN428-S.SNP.4:26149653 chr04:026149653 0 W/26149653-26149653 FN428-S Single Base Substitution A-C INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2648-S.SNP.4:26150540 chr04:026150540 0 W/26150540-26150540 FN2648-S SNP G -> A AC=2;AN=200;BQB=0.418147;DP=4936;DP4=2045,2636,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.94996e-26;MQSB=0.982688;RPB=0.393395;SGB=215.445;VDB=0.990163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.4:26151802 chr04:026151802 0 W/26151802-26151802 FN1476-S Single Base Substitution A-G INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3652-S.SNP.4:26153010 chr04:026153010 0 W/26153010-26153010 FN3652-S SNP C -> T AC=1;AN=190;BQB=0.935159;DP=2641;DP4=1318,1229,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16022e-08;MQSB=0.935819;RPB=0.845094;SGB=32.5467;VDB=0.896986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.4:26170539 chr04:026170539 0 W/26170539-26170539 FN3494-S SNP C -> T AC=2;AN=184;BQB=0.36202;DP=2913;DP4=1517,1250,24,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.94071e-14;MQSB=0.89078;RPB=0.599239;SGB=-6.88719;VDB=0.49806;EFF=INTRON(MODIFIER||||293|LOC_Os04g44210|protein_coding|CODING|LOC_Os04g44210.1|4|1),INTRON(MODIFIER||||196|LOC_Os04g44210|protein_coding|CODING|LOC_Os04g44210.3|3|1) FN3592-S.SNP.4:26176757 chr04:026176757 0 W/26176757-26176757 FN3592-S SNP G -> C AC=1;AN=188;BQB=0.768756;DP=3067;DP4=1392,1564,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.05632e-06;MQSB=0.963085;RPB=0.304667;SGB=48.979;VDB=0.167164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.4:26179134 chr04:026179134 0 W/26179134-26179134 FN2651-S SNP A -> G AC=2;AN=200;BQB=0.117436;DP=4568;DP4=2142,2150,30,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07966e-30;MQSB=0.952736;RPB=0.236146;SGB=247.682;VDB=0.542968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.4:26181650 chr04:026181650 0 W/26181650-26181650 FN-164 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g44220 MIF4G domain containing protein, putative, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1477-S.SNP.4:26187380 chr04:026187380 0 W/26187380-26187380 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN520-S.SNP.4:26194771 chr04:026194771 0 W/26194771-26194771 FN520-S Single Base Substitution A-T INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN689-S.SNP.4:26196729 chr04:026196729 0 W/26196729-26196729 FN689-S Single Base Substitution A-T INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2199-S.SNP.4:26203251 chr04:026203251 0 W/26203251-26203251 FN2199-S SNP T -> A AC=1;AN=190;BQB=0.163967;DP=4206;DP4=1905,1875,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.73135e-08;MQSB=0.769524;RPB=0.150581;SGB=53.6492;VDB=0.204649;EFF=INTRON(MODIFIER||||532|LOC_Os04g44230|protein_coding|CODING|LOC_Os04g44230.1|4|1) FN2095-S.SNP.4:26209028 chr04:026209028 0 W/26209028-26209028 FN2095-S SNP A -> G AC=2;AN=168;BQB=0.182388;DP=3558;DP4=1765,1722,32,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.73868e-25;MQSB=0.975019;RPB=0.91824;SGB=1.86015;VDB=0.66449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.4:26213323 chr04:026213323 0 W/26213323-26213323 FN3639-S SNP T -> C AC=2;AN=190;BQB=0.991317;DP=3304;DP4=1404,1764,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.12863e-15;MQSB=0.854898;RPB=0.362244;SGB=92.9626;VDB=0.90427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.4:26214586 chr04:026214586 0 W/26214586-26214586 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.342685;DP=4203;DP4=2123,1632,16,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.48888e-10;MQSB=0.00184254;RPB=0.246903;SGB=50.3263;VDB=0.639883;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A267|493|LOC_Os04g44250|protein_coding|CODING|LOC_Os04g44250.1|1|1) FN2422.SNP.4:26217189 chr04:026217189 0 W/26217189-26217189 FN2422 SNP C -> T AC=2;AN=200;BQB=0.919507;DP=4372;DP4=2040,2109,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000228728;MQB=1.99504e-20;MQSB=0.897712;RPB=0.66115;SGB=86.7987;VDB=0.99224;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.4:26221946 chr04:026221946 0 W/26221946-26221946 FN-187 Single Base Substitution A-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-98.SNP.4:26224387 chr04:026224387 0 W/26224387-26224387 FN-98 Single Base Substitution C-T INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2673-S.SNP.4:26239678 chr04:026239678 0 W/26239678-26239678 FN2673-S SNP A -> T AC=2;AN=200;BQB=0.652429;DP=4838;DP4=2449,2170,34,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.83915e-28;MQSB=0.938025;RPB=0.49026;SGB=123.271;VDB=0.999582;EFF=INTRON(MODIFIER||||724|LOC_Os04g44300|protein_coding|CODING|LOC_Os04g44300.1|1|1),INTRON(MODIFIER||||688|LOC_Os04g44300|protein_coding|CODING|LOC_Os04g44300.2|2|1) FN3372-S.SNP.4:26242004 chr04:026242004 0 W/26242004-26242004 FN3372-S SNP A -> G AC=2;AN=184;BQB=0.995367;DP=2982;DP4=1530,1264,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.20913e-12;MQSB=0.930306;RPB=0.804421;SGB=103.004;VDB=0.345017;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.4:26244222 chr04:026244222 0 W/26244222-26244222 FN1057-S Single Base Substitution T-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2611-S.SNP.4:26247908 chr04:026247908 0 W/26247908-26247908 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.814398;DP=4716;DP4=2238,2159,42,33;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54143e-44;MQSB=0.997042;RPB=0.22526;SGB=292.093;VDB=0.695467;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A19T|717|LOC_Os04g44320|protein_coding|CODING|LOC_Os04g44320.1|1|1) FN-70.SNP.4:26258120 chr04:026258120 0 W/26258120-26258120 FN-70 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN796-S.SNP.4:26258120 chr04:026258120 0 W/26258120-26258120 FN796-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2678-S.SNP.4:26263478 chr04:026263478 0 W/26263478-26263478 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.975245;DP=4878;DP4=2454,2120,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77338e-08;MQSB=0.98194;RPB=0.921085;SGB=3.06925;VDB=0.655855;EFF=INTRON(MODIFIER||||303|LOC_Os04g44354|protein_coding|CODING|LOC_Os04g44354.2|1|1),INTRON(MODIFIER||||535|LOC_Os04g44354|protein_coding|CODING|LOC_Os04g44354.1|1|1) FN4113-S.SNP.4:26276058 chr04:026276058 0 W/26276058-26276058 FN4113-S SNP A -> C AC=2;AN=182;BQB=0.997946;DP=3554;DP4=1687,1733,30,29;HOB=0.0217365;ICB=0.494567;MQ=40;MQ0F=0.0104108;MQB=0.653106;MQSB=0.00161946;RPB=0.0789198;SGB=255.132;VDB=0.328696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.4:26276172 chr04:026276172 0 W/26276172-26276172 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.255788;DP=3890;DP4=2002,1609,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00565553;MQB=2.77629e-05;MQSB=0.627242;RPB=0.903762;SGB=132.261;VDB=0.397495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.4:26276766 chr04:026276766 0 W/26276766-26276766 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.997684;DP=5180;DP4=2388,2526,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.66358e-09;MQSB=0.872172;RPB=0.997841;SGB=58.8698;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.4:26280030 chr04:026280030 0 W/26280030-26280030 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-285.SNP.4:26293214 chr04:026293214 0 W/26293214-26293214 FN-285 Single Base Substitution C-T INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-59.SNP.4:26293214 chr04:026293214 0 W/26293214-26293214 FN-59 Single Base Substitution C-T INTERGENIC HOMO SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1278-S.SNP.4:26293214 chr04:026293214 0 W/26293214-26293214 FN1278-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3450-S.SNP.4:26293214 chr04:026293214 0 W/26293214-26293214 FN3450-S SNP C -> T AC=2;AN=184;BQB=0.754439;DP=2597;DP4=1188,1241,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.29994e-11;MQSB=0.939893;RPB=0.553264;SGB=48.493;VDB=0.354645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.4:26293214 chr04:026293214 0 W/26293214-26293214 FN3535-S SNP C -> T AC=2;AN=188;BQB=0.999959;DP=2586;DP4=1209,1223,8,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.67278e-09;MQSB=0.998461;RPB=0.713811;SGB=67.1521;VDB=0.26298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.4:26301802 chr04:026301802 0 W/26301802-26301802 FN2675-S SNP T -> C AC=1;AN=200;BQB=0.993594;DP=5003;DP4=2451,2336,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41337e-16;MQSB=0.97712;RPB=0.792135;SGB=90.7419;VDB=0.565472;EFF=INTRON(MODIFIER||||564|LOC_Os04g44430|protein_coding|CODING|LOC_Os04g44430.1|2|1) FN805-S.SNP.4:26321896 chr04:026321896 0 W/26321896-26321896 FN805-S Single Base Substitution T-A INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN718-S.SNP.4:26334631 chr04:026334631 0 W/26334631-26334631 FN718-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g44490 retrotransposon protein, putative, unclassified, expressed SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1089-S.SNP.4:26340740 chr04:026340740 0 W/26340740-26340740 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2375.SNP.4:26340895 chr04:026340895 0 W/26340895-26340895 FN2375 SNP C -> T AC=2;AN=192;BQB=0.991285;DP=4612;DP4=2167,2072,29,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000216826;MQB=1.52096e-24;MQSB=0.383348;RPB=0.997444;SGB=150.275;VDB=0.107786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.4:26340895 chr04:026340895 0 W/26340895-26340895 FN2618-S SNP C -> T AC=2;AN=198;BQB=0.808308;DP=3763;DP4=1837,1661,22,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.92442e-18;MQSB=0.55115;RPB=0.592736;SGB=73.4614;VDB=0.712174;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.4:26340895 chr04:026340895 0 W/26340895-26340895 FN451-S Single Base Substitution C-T INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN597-S.SNP.4:26344092 chr04:026344092 0 W/26344092-26344092 FN597-S Single Base Substitution G-T INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-381.SNP.4:26345215 chr04:026345215 0 W/26345215-26345215 FN-381 Single Base Substitution T-C INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN-233.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN-233 Single Base Substitution T-C INTERGENIC HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN-91.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN-91 Single Base Substitution T-C INTERGENIC HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN1163-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN1163-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1516-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN1516-S Single Base Substitution T-C INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN1753-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN1753-S SNP T -> C AC=2;AN=188;BQB=0.830874;DP=3096;DP4=952,2100,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.85476e-12;MQSB=0.974005;RPB=0.990619;SGB=41.3359;VDB=0.221653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN2684-S SNP T -> C AC=2;AN=200;BQB=0.567358;DP=4931;DP4=2206,2391,36,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.54594e-35;MQSB=0.950341;RPB=0.710522;SGB=202.502;VDB=0.372957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN3552-S SNP T -> C AC=2;AN=188;BQB=0.747867;DP=2580;DP4=1137,1344,15,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.1004e-15;MQSB=0.965724;RPB=0.745925;SGB=103.498;VDB=0.789092;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN3782-S SNP T -> C AC=2;AN=190;BQB=0.981557;DP=2675;DP4=1245,1314,18,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.38825e-15;MQSB=0.994702;RPB=0.993994;SGB=89.4087;VDB=0.649159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN3981-S SNP T -> C AC=2;AN=168;BQB=0.572358;DP=2528;DP4=1139,1272,11,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.81571e-11;MQSB=0.932651;RPB=0.794365;SGB=89.641;VDB=0.861599;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN4141-S SNP T -> C AC=2;AN=170;BQB=0.940649;DP=2414;DP4=1174,1124,8,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.6789e-12;MQSB=0.995435;RPB=0.937157;SGB=87.856;VDB=0.45609;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN576-S Single Base Substitution T-C INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN622-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN622-S Single Base Substitution T-C INTERGENIC HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN987-S.SNP.4:26353955 chr04:026353955 0 W/26353955-26353955 FN987-S Single Base Substitution T-C INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN3395-S.SNP.4:26360041 chr04:026360041 0 W/26360041-26360041 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.981204;DP=2719;DP4=1113,1482,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.05606e-14;MQSB=0.941013;RPB=0.777977;SGB=88.5747;VDB=0.360778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.4:26363931 chr04:026363931 0 W/26363931-26363931 FN2232-S SNP A -> T AC=2;AN=190;BQB=0.424375;DP=4708;DP4=1921,2277,19,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.90382e-17;MQSB=0.999451;RPB=0.079491;SGB=-46.1392;VDB=0.603128;EFF=UTR_5_PRIME(MODIFIER||1194||413|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.1|1|1),UTR_5_PRIME(MODIFIER||1194||413|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.3|1|1),UTR_5_PRIME(MODIFIER||1194||413|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.5|1|1),UTR_5_PRIME(MODIFIER||1194||370|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.8|1|1),UTR_5_PRIME(MODIFIER||1194||413|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.7|1|1),UTR_5_PRIME(MODIFIER||1194||413|LOC_Os04g44530|protein_coding|CODING|LOC_Os04g44530.2|1|1) 704-2.SNP.4:26375489 chr04:026375489 0 W/26375489-26375489 704-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1456, Mutant_ID: 704-2, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. FN784-S.SNP.4:26380002 chr04:026380002 0 W/26380002-26380002 FN784-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN399-S.SNP.4:26384100 chr04:026384100 0 W/26384100-26384100 FN399-S Single Base Substitution G-A INTRON HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1541-S.SNP.4:26386450 chr04:026386450 0 W/26386450-26386450 FN1541-S Single Base Substitution G-C INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2667-S.SNP.4:26393515 chr04:026393515 0 W/26393515-26393515 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.776471;DP=4454;DP4=2159,2055,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90256e-11;MQSB=0.972711;RPB=0.0600031;SGB=77.2904;VDB=0.880869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.4:26393897 chr04:026393897 0 W/26393897-26393897 FN1048-S Single Base Substitution A-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN2661-S.SNP.4:26395625 chr04:026395625 0 W/26395625-26395625 FN2661-S SNP T -> A AC=2;AN=200;BQB=0.872894;DP=4682;DP4=2364,1957,25,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.80577e-23;MQSB=0.980163;RPB=0.211368;SGB=44.8037;VDB=0.446982;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.4:26404851 chr04:026404851 0 W/26404851-26404851 FN-184 Single Base Substitution A-G INTERGENIC HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2482.SNP.4:26409280 chr04:026409280 0 W/26409280-26409280 FN2482 SNP G -> A AC=1;AN=200;BQB=0.929154;DP=6402;DP4=3054,3033,7,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00124961;MQB=0.0399461;MQSB=0.451736;RPB=0.810347;SGB=29.4849;VDB=0.960843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S144N|1032|LOC_Os04g44630|protein_coding|CODING|LOC_Os04g44630.1|6|1) FN2195-S.SNP.4:26417088 chr04:026417088 0 W/26417088-26417088 FN2195-S SNP C -> T AC=2;AN=190;BQB=0.9998;DP=5149;DP4=2560,2312,18,20;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0576811;MQB=0.0133321;MQSB=1.13791e-16;RPB=0.426146;SGB=167.496;VDB=0.41053;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V882I|1645|LOC_Os04g44640|protein_coding|CODING|LOC_Os04g44640.1|9|1) FN2271-S.SNP.4:26420247 chr04:026420247 0 W/26420247-26420247 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.989929;DP=4427;DP4=2056,2017,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.05986;MQB=0.997534;MQSB=1.0223e-18;RPB=0.644217;SGB=57.4238;VDB=0.218229;EFF=INTRON(MODIFIER||||1645|LOC_Os04g44640|protein_coding|CODING|LOC_Os04g44640.1|3|1) W554-1-1.SNP.4:26433809 chr04:026433809 0 W/26433809-26433809 W554-1-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN-371.SNP.4:26436480 chr04:026436480 0 W/26436480-26436480 FN-371 Single Base Substitution T-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3508-S.SNP.4:26437076 chr04:026437076 0 W/26437076-26437076 FN3508-S SNP T -> G AC=1;AN=188;BQB=0.85782;DP=3679;DP4=1962,1625,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.44178e-07;MQSB=0.776676;RPB=0.943043;SGB=43.0708;VDB=0.668976;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.4:26437076 chr04:026437076 0 W/26437076-26437076 W607-2-1 Single Base Substitution T-G INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3446-S.SNP.4:26439938 chr04:026439938 0 W/26439938-26439938 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.971062;DP=3427;DP4=1258,2039,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.71507e-13;MQSB=0.479448;RPB=0.515522;SGB=-12.6269;VDB=0.0905958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N170D|466|LOC_Os04g44670|protein_coding|CODING|LOC_Os04g44670.1|1|1) FN4112-S.SNP.4:26441920 chr04:026441920 0 W/26441920-26441920 FN4112-S SNP T -> A AC=1;AN=182;BQB=0.994939;DP=2606;DP4=1170,1319,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.59653e-10;MQSB=0.977067;RPB=0.997884;SGB=6.66046;VDB=0.128276;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.4:26441920 chr04:026441920 0 W/26441920-26441920 FN832-S Single Base Substitution T-A INTERGENIC HOMO SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2650-S.SNP.4:26441922 chr04:026441922 0 W/26441922-26441922 FN2650-S SNP A -> T AC=1;AN=200;BQB=0.855645;DP=4342;DP4=2112,2056,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01369e-07;MQSB=0.759772;RPB=0.687178;SGB=33.0593;VDB=0.82322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.4:26444890 chr04:026444890 0 W/26444890-26444890 FN2179-S SNP T -> A AC=1;AN=168;BQB=0.0226527;DP=3334;DP4=1692,1608,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.33645e-06;MQSB=0.763117;RPB=0.984791;SGB=-66.4989;VDB=0.868297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.4:26445094 chr04:026445094 0 W/26445094-26445094 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.40906;DP=4702;DP4=2345,2048,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0714e-16;MQSB=0.852258;RPB=0.999899;SGB=-5.84819;VDB=0.32598;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.4:26446451 chr04:026446451 0 W/26446451-26446451 FN-210 Single Base Substitution T-C INTERGENIC HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN731-S.SNP.4:26447484 chr04:026447484 0 W/26447484-26447484 FN731-S Single Base Substitution G-A INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN951-S.SNP.4:26470267 chr04:026470267 0 W/26470267-26470267 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN-93.SNP.4:26481919 chr04:026481919 0 W/26481919-26481919 FN-93 Single Base Substitution T-C INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2579-S.SNP.4:26482476 chr04:026482476 0 W/26482476-26482476 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.0521906;DP=4164;DP4=1837,2138,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.59996e-15;MQSB=0.999205;RPB=0.524436;SGB=101.266;VDB=0.851646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.4:26490205 chr04:026490205 0 W/26490205-26490205 FN1321-S Single Base Substitution C-T INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3934-S.SNP.4:26491554 chr04:026491554 0 W/26491554-26491554 FN3934-S SNP T -> C AC=1;AN=158;BQB=0.996108;DP=2519;DP4=1322,1121,11,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.56494e-10;MQSB=0.967041;RPB=0.456969;SGB=21.4493;VDB=0.0822527;EFF=INTRON(MODIFIER||||877|LOC_Os04g44710|protein_coding|CODING|LOC_Os04g44710.1|12|1),INTRON(MODIFIER||||758|LOC_Os04g44710|protein_coding|CODING|LOC_Os04g44710.2|13|1) FN_N1-150-1.SNP.4:26493186 chr04:026493186 0 W/26493186-26493186 FN_N1-150-1 Single Base Substitution G-C HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1465-S.SNP.4:26499871 chr04:026499871 0 W/26499871-26499871 FN1465-S Single Base Substitution T-C INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3781-S.SNP.4:26500625 chr04:026500625 0 W/26500625-26500625 FN3781-S SNP T -> A AC=1;AN=190;BQB=0.994356;DP=3155;DP4=1418,1573,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35977e-09;MQSB=0.9997;RPB=0.901726;SGB=53.8699;VDB=0.974022;EFF=INTRON(MODIFIER||||422|LOC_Os04g44730|protein_coding|CODING|LOC_Os04g44730.1|3|1) FN-65.SNP.4:26501712 chr04:026501712 0 W/26501712-26501712 FN-65 Single Base Substitution T-G INTRON HOMO SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN465-S.SNP.4:26502062 chr04:026502062 0 W/26502062-26502062 FN465-S Single Base Substitution C-A INTRON HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN4166-S.SNP.4:26503630 chr04:026503630 0 W/26503630-26503630 FN4166-S SNP A -> G AC=1;AN=170;BQB=0.964892;DP=2403;DP4=1203,1127,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.27422e-07;MQSB=0.99919;RPB=0.937021;SGB=38.987;VDB=0.982084;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.4:26507681 chr04:026507681 0 W/26507681-26507681 FN854-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN-365.SNP.4:26512393 chr04:026512393 0 W/26512393-26512393 FN-365 Single Base Substitution A-T INTRON HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN-365.SNP.4:26512394 chr04:026512394 0 W/26512394-26512394 FN-365 Single Base Substitution T-C INTRON HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN461-S.SNP.4:26522456 chr04:026522456 0 W/26522456-26522456 FN461-S Single Base Substitution G-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN-386.SNP.4:26523671 chr04:026523671 0 W/26523671-26523671 FN-386 Single Base Substitution G-A INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2485.SNP.4:26538894 chr04:026538894 0 W/26538894-26538894 FN2485 SNP C -> T AC=1;AN=200;BQB=0.462158;DP=4215;DP4=2027,1945,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.65088e-08;MQSB=0.813073;RPB=0.891556;SGB=40.2696;VDB=0.305174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.4:26540110 chr04:026540110 0 W/26540110-26540110 FN1472-S Single Base Substitution T-A INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1666-S.SNP.4:26540190 chr04:026540190 0 W/26540190-26540190 FN1666-S SNP T -> A AC=1;AN=188;BQB=0.0760544;DP=4065;DP4=2311,1619,15,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31714e-05;MQSB=0.99769;RPB=0.56512;SGB=-86.4405;VDB=0.282447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.4:26540214 chr04:026540214 0 W/26540214-26540214 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.542526;DP=5313;DP4=2581,2214,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000188218;MQB=1.55767e-09;MQSB=0.982114;RPB=0.0506806;SGB=-12.5051;VDB=0.280204;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.4:26550315 chr04:026550315 0 W/26550315-26550315 FN430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1068-S.SNP.4:26552656 chr04:026552656 0 W/26552656-26552656 FN1068-S Single Base Substitution T-A INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. W466-5-1.SNP.4:26555358 chr04:026555358 0 W/26555358-26555358 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2492.SNP.4:26558096 chr04:026558096 0 W/26558096-26558096 FN2492 SNP G -> T AC=1;AN=200;BQB=0.00651558;DP=4232;DP4=2370,1566,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.14362e-06;MQSB=0.57049;RPB=0.033454;SGB=26.8797;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.4:26561864 chr04:026561864 0 W/26561864-26561864 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.99296;DP=2856;DP4=1246,1495,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.60525e-11;MQSB=0.88597;RPB=0.715193;SGB=39.4251;VDB=0.115615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.4:26562414 chr04:026562414 0 W/26562414-26562414 FN4305-S SNP T -> A AC=1;AN=170;BQB=0.999916;DP=2887;DP4=1497,1293,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.68787e-07;MQSB=0.997151;RPB=0.866228;SGB=41.7633;VDB=0.871209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.4:26600172 chr04:026600172 0 W/26600172-26600172 FN1335-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2682-S.SNP.4:26613156 chr04:026613156 0 W/26613156-26613156 FN2682-S SNP C -> A AC=1;AN=200;BQB=0.993618;DP=4533;DP4=2478,1777,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06119e-09;MQSB=0.936966;RPB=0.997921;SGB=58.8698;VDB=0.855875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G57W|309|LOC_Os04g44980|protein_coding|CODING|LOC_Os04g44980.1|2|1) FN945-S.SNP.4:26614223 chr04:026614223 0 W/26614223-26614223 FN945-S Single Base Substitution C-G INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN531-S.SNP.4:26622440 chr04:026622440 0 W/26622440-26622440 FN531-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g45010 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN531-S.SNP.4:26622441 chr04:026622441 0 W/26622441-26622441 FN531-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g45010 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN1554-S.SNP.4:26631641 chr04:026631641 0 W/26631641-26631641 FN1554-S Single Base Substitution T-C INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3460-S.SNP.4:26632064 chr04:026632064 0 W/26632064-26632064 FN3460-S SNP T -> A AC=1;AN=184;BQB=0.850403;DP=3060;DP4=1477,1447,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.66451e-05;MQSB=0.958035;RPB=0.998647;SGB=44.2207;VDB=0.432711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.4:26633845 chr04:026633845 0 W/26633845-26633845 FN3368-S SNP C -> A AC=1;AN=184;BQB=0.986019;DP=1827;DP4=511,1249,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.42454e-06;MQSB=0.963312;RPB=0.107834;SGB=35.1773;VDB=0.256052;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.4:26658282 chr04:026658282 0 W/26658282-26658282 FN953-S Single Base Substitution C-T INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3282-S.SNP.4:26663003 chr04:026663003 0 W/26663003-26663003 FN3282-S SNP A -> T AC=1;AN=184;BQB=0.935973;DP=3352;DP4=1794,1423,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.26805e-09;MQSB=0.999762;RPB=0.892201;SGB=57.786;VDB=0.0952739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.4:26663599 chr04:026663599 0 W/26663599-26663599 FN1553-S Single Base Substitution G-C INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2121-S.SNP.4:26663627 chr04:026663627 0 W/26663627-26663627 FN2121-S SNP G -> T AC=1;AN=168;BQB=7.08081e-08;DP=3051;DP4=1481,1400,35,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000441311;MQSB=0.958276;RPB=8.30725e-05;SGB=-858.249;VDB=0.0423905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.4:26666872 chr04:026666872 0 W/26666872-26666872 FN1553-S Single Base Substitution G-T INTRON HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2196-S.SNP.4:26669462 chr04:026669462 0 W/26669462-26669462 FN2196-S SNP C -> T AC=2;AN=188;BQB=0.0992652;DP=4543;DP4=2312,1872,49,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.49613e-40;MQSB=0.829525;RPB=0.685344;SGB=246.357;VDB=0.752159;EFF=INTRON(MODIFIER||||181|LOC_Os04g45080|protein_coding|CODING|LOC_Os04g45080.1|3|1) FN2461.SNP.4:26669641 chr04:026669641 0 W/26669641-26669641 FN2461 SNP C -> A AC=1;AN=200;BQB=0.694371;DP=4355;DP4=1841,2288,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22823e-07;MQSB=0.608198;RPB=0.592738;SGB=43.8747;VDB=0.454363;EFF=INTRON(MODIFIER||||181|LOC_Os04g45080|protein_coding|CODING|LOC_Os04g45080.1|3|1) FN1325-S.SNP.4:26673070 chr04:026673070 0 W/26673070-26673070 FN1325-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1553-S.SNP.4:26677187 chr04:026677187 0 W/26677187-26677187 FN1553-S Single Base Substitution A-T INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN974-S.SNP.4:26677471 chr04:026677471 0 W/26677471-26677471 FN974-S Single Base Substitution G-A INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN468-S.SNP.4:26679063 chr04:026679063 0 W/26679063-26679063 FN468-S Single Base Substitution T-C INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN417-S.SNP.4:26681011 chr04:026681011 0 W/26681011-26681011 FN417-S Single Base Substitution A-G INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2482.SNP.4:26691421 chr04:026691421 0 W/26691421-26691421 FN2482 SNP C -> T AC=1;AN=200;BQB=0.844524;DP=4628;DP4=2141,2192,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76011e-07;MQSB=0.559486;RPB=0.980906;SGB=24.2746;VDB=0.8852;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C321|508|LOC_Os04g45140|protein_coding|CODING|LOC_Os04g45140.1|4|1) FN2320.SNP.4:26694957 chr04:026694957 0 W/26694957-26694957 FN2320 SNP C -> T AC=1;AN=192;BQB=0.980527;DP=4644;DP4=2150,2255,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.08626e-12;MQSB=0.98708;RPB=0.956455;SGB=36.607;VDB=0.886915;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.4:26699473 chr04:026699473 0 W/26699473-26699473 FN4165-S SNP A -> T AC=1;AN=170;BQB=0.876037;DP=2565;DP4=1270,1220,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000789783;MQSB=0.907379;RPB=0.576725;SGB=25.6601;VDB=0.841706;EFF=INTRON(MODIFIER||||275|LOC_Os04g45160|protein_coding|CODING|LOC_Os04g45160.2|5|1),INTRON(MODIFIER||||375|LOC_Os04g45160|protein_coding|CODING|LOC_Os04g45160.1|5|1) FN3764-S.SNP.4:26703712 chr04:026703712 0 W/26703712-26703712 FN3764-S SNP G -> T AC=1;AN=190;BQB=0.750502;DP=2602;DP4=1183,1320,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.9392e-05;MQSB=0.992972;RPB=0.612888;SGB=44.5415;VDB=0.8548;EFF=INTRON(MODIFIER||||516|LOC_Os04g45170|protein_coding|CODING|LOC_Os04g45170.1|2|1) FN1451-S.SNP.4:26713127 chr04:026713127 0 W/26713127-26713127 FN1451-S Single Base Substitution G-T INTRON HOMO SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2479.SNP.4:26718284 chr04:026718284 0 W/26718284-26718284 FN2479 SNP G -> A AC=1;AN=200;BQB=0.754941;DP=4616;DP4=2289,2072,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216638;MQB=1.0269e-18;MQSB=0.973149;RPB=0.937863;SGB=141.763;VDB=0.275648;EFF=INTRON(MODIFIER||||384|LOC_Os04g45200|protein_coding|CODING|LOC_Os04g45200.1|2|1),INTRON(MODIFIER||||382|LOC_Os04g45200|protein_coding|CODING|LOC_Os04g45200.2|1|1) FN1547-S.SNP.4:26718709 chr04:026718709 0 W/26718709-26718709 FN1547-S Single Base Substitution A-T INTRON HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN1658-S.SNP.4:26721388 chr04:026721388 0 W/26721388-26721388 FN1658-S SNP C -> T AC=2;AN=188;BQB=0.922904;DP=3799;DP4=1904,1844,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01582e-14;MQSB=0.986461;RPB=0.376268;SGB=-133.118;VDB=0.641781;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-S.SNP.4:26722658 chr04:026722658 0 W/26722658-26722658 FN1554-S Single Base Substitution C-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3302-S.SNP.4:26738557 chr04:026738557 0 W/26738557-26738557 FN3302-S SNP A -> T AC=1;AN=184;BQB=0.819181;DP=3092;DP4=1450,1549,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.32702e-07;MQSB=0.999756;RPB=0.0959214;SGB=57.786;VDB=0.276349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.4:26752061 chr04:026752061 0 W/26752061-26752061 FN2780-S SNP C -> T AC=2;AN=198;BQB=0.958032;DP=4585;DP4=2140,1957,35,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000218103;MQB=3.99256e-26;MQSB=0.716613;RPB=0.729714;SGB=135.901;VDB=0.325397;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.4:26753578 chr04:026753578 0 W/26753578-26753578 FN-273 Single Base Substitution A-T INTRON HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2442.SNP.4:26759725 chr04:026759725 0 W/26759725-26759725 FN2442 SNP T -> C AC=1;AN=200;BQB=0.520241;DP=4496;DP4=2130,2035,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64397e-11;MQSB=0.997724;RPB=0.469153;SGB=12.7003;VDB=0.0536899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.4:26759781 chr04:026759781 0 W/26759781-26759781 FN2600-S SNP G -> T AC=1;AN=198;BQB=0.943352;DP=3882;DP4=2044,1658,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.54677e-14;MQSB=0.93877;RPB=0.930356;SGB=76.1002;VDB=0.116873;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.4:26761060 chr04:026761060 0 W/26761060-26761060 FN-108 Single Base Substitution C-A INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN479-S.SNP.4:26766344 chr04:026766344 0 W/26766344-26766344 FN479-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2085-S.SNP.4:26769522 chr04:026769522 0 W/26769522-26769522 FN2085-S SNP T -> C AC=1;AN=168;BQB=0.806186;DP=3401;DP4=1731,1624,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46661e-12;MQSB=0.999972;RPB=0.935618;SGB=-12.3568;VDB=0.368071;EFF=INTRON(MODIFIER||||475|LOC_Os04g45290|protein_coding|CODING|LOC_Os04g45290.1|2|1),INTRON(MODIFIER||||409|LOC_Os04g45290|protein_coding|CODING|LOC_Os04g45290.2|2|1) FN-349.SNP.4:26774497 chr04:026774497 0 W/26774497-26774497 FN-349 Single Base Substitution C-T INTERGENIC HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1263-S.SNP.4:26777291 chr04:026777291 0 W/26777291-26777291 FN1263-S Single Base Substitution G-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3711-S.SNP.4:26778476 chr04:026778476 0 W/26778476-26778476 FN3711-S SNP A -> T AC=2;AN=190;BQB=0.989388;DP=2236;DP4=817,1291,6,14;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.137746;MQB=0.996755;MQSB=0;RPB=0.670145;SGB=85.5263;VDB=0.293058;EFF=INTERGENIC(MODIFIER||||||||||1) FN789-S.SNP.4:26780184 chr04:026780184 0 W/26780184-26780184 FN789-S Single Base Substitution A-T INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN3600-S.SNP.4:26781305 chr04:026781305 0 W/26781305-26781305 FN3600-S SNP C -> T AC=1;AN=190;BQB=0.880302;DP=2294;DP4=1382,802,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0231037;MQB=0.0799332;MQSB=1.42951e-22;RPB=0.354802;SGB=43.2083;VDB=0.48571;EFF=INTRON(MODIFIER||||320|LOC_Os04g45310|protein_coding|CODING|LOC_Os04g45310.1|1|1) FN1450-S.SNP.4:26791299 chr04:026791299 0 W/26791299-26791299 FN1450-S Single Base Substitution C-T INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1020-S.SNP.4:26793711 chr04:026793711 0 W/26793711-26793711 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1521-S.SNP.4:26797092 chr04:026797092 0 W/26797092-26797092 FN1521-S Single Base Substitution G-C INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1237-S.SNP.4:26797463 chr04:026797463 0 W/26797463-26797463 FN1237-S Single Base Substitution T-A INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2544-S.SNP.4:26806135 chr04:026806135 0 W/26806135-26806135 FN2544-S SNP C -> T AC=1;AN=198;BQB=0.327591;DP=4181;DP4=1906,2058,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22806e-09;MQSB=0.996559;RPB=0.91966;SGB=43.7442;VDB=0.697873;EFF=INTRON(MODIFIER||||192|LOC_Os04g45340|protein_coding|CODING|LOC_Os04g45340.1|1|1) FN1512-S.SNP.4:26806501 chr04:026806501 0 W/26806501-26806501 FN1512-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN682-S.SNP.4:26806711 chr04:026806711 0 W/26806711-26806711 FN682-S Single Base Substitution A-T INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2602-S.SNP.4:26807878 chr04:026807878 0 W/26807878-26807878 FN2602-S SNP A -> T AC=1;AN=198;BQB=0.998241;DP=4327;DP4=2098,2007,4,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.96004e-09;MQSB=0.925789;RPB=0.984953;SGB=31.9395;VDB=0.626322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.4:26808686 chr04:026808686 0 W/26808686-26808686 FN1536-S Single Base Substitution G-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3770-S.SNP.4:26809307 chr04:026809307 0 W/26809307-26809307 FN3770-S SNP T -> C AC=1;AN=190;BQB=0.968639;DP=2497;DP4=1155,1246,8,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.97523e-05;MQSB=0.787964;RPB=0.736677;SGB=21.8853;VDB=0.594468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.4:26810722 chr04:026810722 0 W/26810722-26810722 FN1708-S SNP C -> A AC=2;AN=188;BQB=0.922828;DP=2592;DP4=1558,1003,4,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.30775e-06;MQSB=0.905624;RPB=0.999585;SGB=48.979;VDB=0.775148;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.4:26811145 chr04:026811145 0 W/26811145-26811145 FN478-S Single Base Substitution G-A INTERGENIC HOMO SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2683-S.SNP.4:26816332 chr04:026816332 0 W/26816332-26816332 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.969152;DP=4692;DP4=2464,1965,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38126e-13;MQSB=0.999181;RPB=0.38812;SGB=109.527;VDB=0.654808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.4:26821953 chr04:026821953 0 W/26821953-26821953 FN3807-S SNP A -> G AC=1;AN=190;BQB=0.752872;DP=2947;DP4=1424,1415,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.63515e-07;MQSB=0.946694;RPB=0.492735;SGB=15.9981;VDB=0.194617;EFF=UTR_5_PRIME(MODIFIER||161||650|LOC_Os04g45360|protein_coding|CODING|LOC_Os04g45360.1|2|1) FN997-S.SNP.4:26824632 chr04:026824632 0 W/26824632-26824632 FN997-S Single Base Substitution G-A INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN1315-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN1315-S Single Base Substitution A-G INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1380-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN1380-S Single Base Substitution A-G INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1529-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN1529-S Single Base Substitution A-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2445.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN2445 SNP A -> G AC=1;AN=200;BQB=0.213056;DP=3477;DP4=1123,1478,8,7;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.121369;MQB=0.999748;MQSB=1.14402e-07;RPB=0.881811;SGB=43.8747;VDB=0.542796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN3568-S SNP A -> G AC=1;AN=188;BQB=0.858358;DP=5204;DP4=3167,1558,32,8;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.150077;MQB=0.278673;MQSB=0;RPB=0.999708;SGB=-46.4986;VDB=0.97039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN3697-S SNP A -> G AC=1;AN=190;BQB=0.561582;DP=2033;DP4=936,886,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.128874;MQB=0.8369;MQSB=3.04817e-33;RPB=0.917295;SGB=-34.0938;VDB=0.718513;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN3792-S SNP A -> G AC=1;AN=190;BQB=0.445358;DP=2755;DP4=1271,1233,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.118693;MQB=0.783962;MQSB=0;RPB=0.954589;SGB=-96.0984;VDB=0.925519;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN4049-S SNP A -> G AC=1;AN=168;BQB=0.970983;DP=2130;DP4=979,905,2,7;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.141315;MQB=0.65349;MQSB=7.87147e-31;RPB=0.314437;SGB=7.59999;VDB=0.74989;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN550-S Single Base Substitution A-G INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN673-S.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN673-S Single Base Substitution A-G INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN_789-3-1.SNP.4:26826213 chr04:026826213 0 W/26826213-26826213 FN_789-3-1 Single Base Substitution A-G INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN4032-S.SNP.4:26827263 chr04:026827263 0 W/26827263-26827263 FN4032-S SNP C -> T AC=1;AN=168;BQB=0.959112;DP=2444;DP4=702,1591,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.191489;MQB=0.553284;MQSB=1.16575e-32;RPB=0.0644362;SGB=56.6036;VDB=0.546398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.4:26827558 chr04:026827558 0 W/26827558-26827558 FN2172-S SNP G -> T AC=1;AN=168;BQB=0.22156;DP=1392;DP4=647,628,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0344828;MQB=0.00715058;MQSB=0.0380153;RPB=0.872277;SGB=-5.82488;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.4:26828095 chr04:026828095 0 W/26828095-26828095 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.31817;DP=2682;DP4=1975,666,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0384042;MQB=0.0521599;MQSB=2.46074e-15;RPB=0.49666;SGB=5.5382;VDB=0.731075;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.4:26833439 chr04:026833439 0 W/26833439-26833439 FN1396-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1396-S.SNP.4:26833440 chr04:026833440 0 W/26833440-26833440 FN1396-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2558-S.SNP.4:26835833 chr04:026835833 0 W/26835833-26835833 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.207152;DP=4293;DP4=2096,1848,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.13168e-14;MQSB=0.647195;RPB=0.761033;SGB=-100.25;VDB=0.481018;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.4:26846117 chr04:026846117 0 W/26846117-26846117 FN580-S Single Base Substitution G-C INTRON HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN880-S.SNP.4:26846581 chr04:026846581 0 W/26846581-26846581 FN880-S Single Base Substitution C-T INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1366-S.SNP.4:26849222 chr04:026849222 0 W/26849222-26849222 FN1366-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3859-S.SNP.4:26852185 chr04:026852185 0 W/26852185-26852185 FN3859-S SNP G -> A AC=1;AN=158;BQB=0.975731;DP=2767;DP4=1284,1405,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.117094;MQB=0.992868;MQSB=0.883751;RPB=0.591006;SGB=14.3409;VDB=0.457614;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1383|1799|LOC_Os04g45400|protein_coding|CODING|LOC_Os04g45400.1|3|1) FN2326.SNP.4:26862990 chr04:026862990 0 W/26862990-26862990 FN2326 SNP A -> C AC=1;AN=192;BQB=0.248729;DP=5337;DP4=2874,2045,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.54711e-10;MQSB=0.957502;RPB=0.452736;SGB=67.4678;VDB=0.336775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I2510S|2641|LOC_Os04g45420|protein_coding|CODING|LOC_Os04g45420.1|10|1) FN2326.SNP.4:26862991 chr04:026862991 0 W/26862991-26862991 FN2326 SNP T -> A AC=1;AN=192;BQB=0.666695;DP=5352;DP4=2918,2075,13,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.92279e-11;MQSB=0.984709;RPB=0.545511;SGB=28.9139;VDB=0.514804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I2510F|2641|LOC_Os04g45420|protein_coding|CODING|LOC_Os04g45420.1|10|1) FN-93.SNP.4:26869602 chr04:026869602 0 W/26869602-26869602 FN-93 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g45420 retrotransposon protein, putative, unclassified, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN825-S.SNP.4:26871183 chr04:026871183 0 W/26871183-26871183 FN825-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-169.SNP.4:26872573 chr04:026872573 0 W/26872573-26872573 FN-169 Single Base Substitution C-G INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN414-S.SNP.4:26872782 chr04:026872782 0 W/26872782-26872782 FN414-S Single Base Substitution A-G INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2622-S.SNP.4:26873213 chr04:026873213 0 W/26873213-26873213 FN2622-S SNP C -> G AC=2;AN=200;BQB=0.636819;DP=5212;DP4=2545,2334,28,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.1813e-40;MQSB=0.986627;RPB=0.944444;SGB=302.944;VDB=0.962029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.4:26873482 chr04:026873482 0 W/26873482-26873482 FN2411 SNP C -> T AC=2;AN=200;BQB=0.996614;DP=4214;DP4=1683,2225,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.415e-23;MQSB=0.995273;RPB=0.219332;SGB=187.814;VDB=0.206546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.4:26883181 chr04:026883181 0 W/26883181-26883181 FN2223-S SNP G -> C AC=1;AN=190;BQB=0.590899;DP=2960;DP4=1280,1429,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0027027;MQB=0.0138701;MQSB=0.000126431;RPB=0.272455;SGB=26.3271;VDB=0.126837;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.4:26886236 chr04:026886236 0 W/26886236-26886236 FN-411 Single Base Substitution T-C INTRON HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN3540-S.SNP.4:26887272 chr04:026887272 0 W/26887272-26887272 FN3540-S SNP G -> A AC=1;AN=188;BQB=0.540056;DP=4231;DP4=2659,1479,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.101394;MQB=0.499713;MQSB=5.1887e-16;RPB=0.999649;SGB=64.3306;VDB=0.790645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R86H|1831|LOC_Os04g45440|protein_coding|CODING|LOC_Os04g45440.1|2|1) FN3499-S.SNP.4:26891556 chr04:026891556 0 W/26891556-26891556 FN3499-S SNP C -> T AC=1;AN=188;BQB=0.951263;DP=3213;DP4=1632,1520,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00248988;MQB=1.68564e-06;MQSB=0.893407;RPB=0.602068;SGB=53.7007;VDB=0.0650137;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1352C|1831|LOC_Os04g45440|protein_coding|CODING|LOC_Os04g45440.1|3|1) FN2429.SNP.4:26893015 chr04:026893015 0 W/26893015-26893015 FN2429 SNP G -> T AC=1;AN=200;BQB=0.110391;DP=3662;DP4=1517,1830,13,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000819224;MQB=4.5002e-05;MQSB=0.000801761;RPB=0.170234;SGB=55.5366;VDB=0.493369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1816L|1831|LOC_Os04g45440|protein_coding|CODING|LOC_Os04g45440.1|4|1) FN3803-S.SNP.4:26894118 chr04:026894118 0 W/26894118-26894118 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.743272;DP=2360;DP4=1380,854,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0122881;MQB=0.21664;MQSB=2.88992e-10;RPB=0.597408;SGB=58.2031;VDB=0.760546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.4:26894590 chr04:026894590 0 W/26894590-26894590 FN1402-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN818-S.SNP.4:26896826 chr04:026896826 0 W/26896826-26896826 FN818-S Single Base Substitution G-A INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN3947-S.SNP.4:26898581 chr04:026898581 0 W/26898581-26898581 FN3947-S SNP T -> C AC=1;AN=168;BQB=0.999046;DP=2762;DP4=1088,1490,11,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.02898e-14;MQSB=0.929906;RPB=0.160703;SGB=103.364;VDB=0.733412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.4:26907568 chr04:026907568 0 W/26907568-26907568 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.824063;DP=4886;DP4=2417,2188,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.90662e-10;MQSB=0.999659;RPB=0.924577;SGB=63.4749;VDB=0.312197;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A108V|497|LOC_Os04g45470|protein_coding|CODING|LOC_Os04g45470.1|2|1) FN2645-S.SNP.4:26910382 chr04:026910382 0 W/26910382-26910382 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.490313;DP=4843;DP4=2315,2278,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000825934;MQB=7.16941e-12;MQSB=0.932863;RPB=0.819143;SGB=86.5007;VDB=0.0716171;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.4:26922742 chr04:026922742 0 W/26922742-26922742 FN4204-S SNP C -> A AC=1;AN=170;BQB=0.996053;DP=3046;DP4=1465,1497,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000328299;MQB=5.86945e-07;MQSB=0.92578;RPB=0.235468;SGB=47.8722;VDB=0.217648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.4:26924732 chr04:026924732 0 W/26924732-26924732 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.824996;DP=4977;DP4=2631,2072,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.97023e-14;MQSB=0.793734;RPB=0.998412;SGB=76.3213;VDB=0.38261;EFF=INTERGENIC(MODIFIER||||||||||1) 704-1-1.SNP.4:26937063 chr04:026937063 0 W/26937063-26937063 704-1-1 Single Base Substitution C-G INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN1711-S.SNP.4:26937139 chr04:026937139 0 W/26937139-26937139 FN1711-S SNP G -> A AC=1;AN=188;BQB=0.00642773;DP=2913;DP4=1863,1003,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.39241e-05;MQSB=0.946072;RPB=0.492395;SGB=5.5382;VDB=0.694045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.4:26938486 chr04:026938486 0 W/26938486-26938486 FN1701-S SNP G -> A AC=2;AN=188;BQB=0.989362;DP=2941;DP4=1830,1066,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.72654e-09;MQSB=0.978054;RPB=0.0672315;SGB=26.0762;VDB=0.0686649;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.4:26939049 chr04:026939049 0 W/26939049-26939049 FN3903-S SNP A -> C AC=1;AN=158;BQB=0.994005;DP=2153;DP4=776,1249,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.09179e-08;MQSB=0.0698135;RPB=0.994415;SGB=64.5449;VDB=0.0170033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.4:26950075 chr04:026950075 0 W/26950075-26950075 FN3727-S SNP T -> C AC=1;AN=190;BQB=0.449406;DP=2083;DP4=1073,868,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0518483;MQB=0.97119;MQSB=1.48675e-08;RPB=0.556537;SGB=21.8853;VDB=0.536808;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K91E|884|LOC_Os04g45550|protein_coding|CODING|LOC_Os04g45550.1|1|1) FN708-S.SNP.4:26955492 chr04:026955492 0 W/26955492-26955492 FN708-S Single Base Substitution A-C INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2114-S.SNP.4:26960697 chr04:026960697 0 W/26960697-26960697 FN2114-S SNP T -> A AC=1;AN=168;BQB=0.0482819;DP=3986;DP4=1954,1951,2,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.97992e-07;MQSB=0.913968;RPB=0.368747;SGB=-90.3546;VDB=0.0104038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.4:26961032 chr04:026961032 0 W/26961032-26961032 FN1122-S Single Base Substitution G-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1573-S.SNP.4:26990543 chr04:026990543 0 W/26990543-26990543 FN1573-S Single Base Substitution T-G INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2353.SNP.4:26998384 chr04:026998384 0 W/26998384-26998384 FN2353 SNP G -> A AC=1;AN=192;BQB=0.205899;DP=5210;DP4=2494,2287,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.0755e-14;MQSB=0.846614;RPB=0.641028;SGB=-42.7339;VDB=0.896215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.4:26999511 chr04:026999511 0 W/26999511-26999511 FN2493 SNP T -> A AC=1;AN=200;BQB=0.198437;DP=4768;DP4=2300,2232,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.85707e-10;MQSB=0.999999;RPB=0.574356;SGB=77.2904;VDB=0.598916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.4:26999911 chr04:026999911 0 W/26999911-26999911 FN3444-S SNP T -> C AC=1;AN=182;BQB=0.93451;DP=2867;DP4=1507,1292,2,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.56908e-05;MQSB=0.984537;RPB=0.972858;SGB=18.1394;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.4:27007308 chr04:027007308 0 W/27007308-27007308 FN-411 Single Base Substitution G-A INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1492-S.SNP.4:27014057 chr04:027014057 0 W/27014057-27014057 FN1492-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g45665 hypothetical protein SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN-166.SNP.4:27022202 chr04:027022202 0 W/27022202-27022202 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3668-S.SNP.4:27023965 chr04:027023965 0 W/27023965-27023965 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.849539;DP=3402;DP4=1583,1702,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34981e-08;MQSB=0.960378;RPB=0.987134;SGB=62.7569;VDB=0.13081;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.4:27027190 chr04:027027190 0 W/27027190-27027190 FN743-S Single Base Substitution C-G INTERGENIC HOMO SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN1114-S.SNP.4:27034946 chr04:027034946 0 W/27034946-27034946 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN483-S.SNP.4:27036883 chr04:027036883 0 W/27036883-27036883 FN483-S Single Base Substitution C-A INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2634-S.SNP.4:27043576 chr04:027043576 0 W/27043576-27043576 FN2634-S SNP C -> A AC=1;AN=200;BQB=0.977856;DP=4234;DP4=1955,2007,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000236183;MQB=6.48998e-13;MQSB=0.391941;RPB=0.987805;SGB=104.921;VDB=0.438003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3539-S.SNP.4:27051606 chr04:027051606 0 W/27051606-27051606 FN3539-S SNP G -> T AC=1;AN=188;BQB=0.527043;DP=2554;DP4=1274,1226,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000783085;MQB=0.0153244;MQSB=0.0626997;RPB=0.866818;SGB=26.2637;VDB=0.298692;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.4:27051645 chr04:027051645 0 W/27051645-27051645 FN3966-S SNP G -> A AC=1;AN=168;BQB=0.749264;DP=2393;DP4=1065,1230,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000835771;MQB=5.40868e-08;MQSB=0.0222408;RPB=0.880814;SGB=34.3388;VDB=0.411374;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.4:27054587 chr04:027054587 0 W/27054587-27054587 FN1079-S Single Base Substitution G-A INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN682-S.SNP.4:27056366 chr04:027056366 0 W/27056366-27056366 FN682-S Single Base Substitution A-G INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN3802-S.SNP.4:27058775 chr04:027058775 0 W/27058775-27058775 FN3802-S SNP C -> T AC=1;AN=190;BQB=0.998668;DP=3411;DP4=2004,1270,21,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.82972e-20;MQSB=0.996834;RPB=0.365099;SGB=135.619;VDB=0.708215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E317K|361|LOC_Os04g45730|protein_coding|CODING|LOC_Os04g45730.1|2|1) FN3802-S.SNP.4:27058779 chr04:027058779 0 W/27058779-27058779 FN3802-S SNP C -> A AC=1;AN=190;BQB=0.998031;DP=3406;DP4=1962,1287,19,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40232e-18;MQSB=0.995558;RPB=0.405598;SGB=121.957;VDB=0.649159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M315I|361|LOC_Os04g45730|protein_coding|CODING|LOC_Os04g45730.1|2|1) FN3802-S.SNP.4:27058782 chr04:027058782 0 W/27058782-27058782 FN3802-S SNP G -> A AC=1;AN=190;BQB=0.913283;DP=3387;DP4=1923,1322,22,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.17115e-21;MQSB=0.9962;RPB=0.809459;SGB=103.624;VDB=0.790862;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V314|361|LOC_Os04g45730|protein_coding|CODING|LOC_Os04g45730.1|2|1) FN3666-S.SNP.4:27062014 chr04:027062014 0 W/27062014-27062014 FN3666-S SNP C -> T AC=1;AN=190;BQB=0.98584;DP=3192;DP4=1490,1545,12,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.93612e-09;MQSB=0.827476;RPB=0.929079;SGB=58.2031;VDB=0.808233;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.4:27065256 chr04:027065256 0 W/27065256-27065256 FN-198 Single Base Substitution A-G INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN-243.SNP.4:27068285 chr04:027068285 0 W/27068285-27068285 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN230-S.SNP.4:27069993 chr04:027069993 0 W/27069993-27069993 FN230-S Single Base Substitution T-C INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN1344-S.SNP.4:27070072 chr04:027070072 0 W/27070072-27070072 FN1344-S Single Base Substitution C-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-92.SNP.4:27071869 chr04:027071869 0 W/27071869-27071869 FN-92 Single Base Substitution C-T INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-251.SNP.4:27075873 chr04:027075873 0 W/27075873-27075873 FN-251 Single Base Substitution A-T INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN593-S.SNP.4:27075873 chr04:027075873 0 W/27075873-27075873 FN593-S Single Base Substitution A-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN4108-S.SNP.4:27075917 chr04:027075917 0 W/27075917-27075917 FN4108-S SNP G -> T AC=1;AN=182;BQB=0.986575;DP=3235;DP4=1590,1560,4,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.27982e-09;MQSB=0.173551;RPB=0.719815;SGB=42.6494;VDB=0.200918;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.4:27086898 chr04:027086898 0 W/27086898-27086898 FN-156 Single Base Substitution C-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2089-S.SNP.4:27088290 chr04:027088290 0 W/27088290-27088290 FN2089-S SNP C -> A AC=2;AN=168;BQB=0.0208593;DP=3763;DP4=1832,1862,20,29;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=7.35703e-11;MQSB=0.88427;RPB=0.648063;SGB=-375.991;VDB=0.885216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A136E|943|LOC_Os04g45770|protein_coding|CODING|LOC_Os04g45770.1|1|1) FN1476-S.SNP.4:27089025 chr04:027089025 0 W/27089025-27089025 FN1476-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g45770 retrotransposon protein, putative, unclassified, expressed SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1031-S.SNP.4:27091154 chr04:027091154 0 W/27091154-27091154 FN1031-S Single Base Substitution A-G INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3387-S.SNP.4:27093125 chr04:027093125 0 W/27093125-27093125 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.9391;DP=2887;DP4=1418,1404,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.55773e-07;MQSB=0.889682;RPB=0.75371;SGB=25.1826;VDB=0.583965;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C733Y|832|LOC_Os04g45780|protein_coding|CODING|LOC_Os04g45780.1|5|1) FN3479-S.SNP.4:27094241 chr04:027094241 0 W/27094241-27094241 FN3479-S SNP C -> A AC=2;AN=184;BQB=0.997602;DP=2708;DP4=1409,1225,11,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.38846e-10;MQSB=0.99965;RPB=0.84183;SGB=71.3514;VDB=0.450105;EFF=INTRON(MODIFIER||||832|LOC_Os04g45780|protein_coding|CODING|LOC_Os04g45780.1|3|1) FN1229-S.SNP.4:27094906 chr04:027094906 0 W/27094906-27094906 FN1229-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g45780 retrotransposon protein, putative, unclassified, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN596-S.SNP.4:27097765 chr04:027097765 0 W/27097765-27097765 FN596-S Single Base Substitution T-C INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2149-S.SNP.4:27101018 chr04:027101018 0 W/27101018-27101018 FN2149-S SNP G -> T AC=2;AN=168;BQB=0.406994;DP=4223;DP4=1964,2186,31,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.885e-27;MQSB=0.999812;RPB=0.555433;SGB=-333.11;VDB=0.144837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1523-S.SNP.4:27102700 chr04:027102700 0 W/27102700-27102700 FN1523-S Single Base Substitution T-A INTERGENIC HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1027-S.SNP.4:27102795 chr04:027102795 0 W/27102795-27102795 FN1027-S Single Base Substitution T-A INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN4183-S.SNP.4:27105574 chr04:027105574 0 W/27105574-27105574 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.758723;DP=2423;DP4=1103,1241,13,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.25329e-11;MQSB=0.96021;RPB=0.26689;SGB=74.528;VDB=0.889539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.4:27127547 chr04:027127547 0 W/27127547-27127547 FN3559-S SNP C -> A AC=1;AN=188;BQB=0.90232;DP=2724;DP4=1028,1607,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.5221e-11;MQSB=0.999947;RPB=0.882839;SGB=85.3253;VDB=0.48759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.4:27130645 chr04:027130645 0 W/27130645-27130645 FN2625-S SNP A -> G AC=1;AN=200;BQB=0.700489;DP=5220;DP4=2573,2364,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.05533e-17;MQSB=0.988253;RPB=0.989538;SGB=-6.45336;VDB=0.69822;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.4:27132790 chr04:027132790 0 W/27132790-27132790 FN819-S Single Base Substitution C-G INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN1202-S.SNP.4:27136357 chr04:027136357 0 W/27136357-27136357 FN1202-S Single Base Substitution C-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2671-S.SNP.4:27139764 chr04:027139764 0 W/27139764-27139764 FN2671-S SNP T -> C AC=1;AN=200;BQB=0.0753835;DP=4907;DP4=2422,2019,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00248427;MQSB=0.269661;RPB=0.997644;SGB=-33.7362;VDB=0.815913;EFF=INTRON(MODIFIER||||209|LOC_Os04g45834|protein_coding|CODING|LOC_Os04g45834.1|1|1),INTRON(MODIFIER||||209|LOC_Os04g45834|protein_coding|CODING|LOC_Os04g45834.3|1|1) FN395-S.SNP.4:27144762 chr04:027144762 0 W/27144762-27144762 FN395-S Single Base Substitution G-A INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1285-S.SNP.4:27147944 chr04:027147944 0 W/27147944-27147944 FN1285-S Single Base Substitution A-G INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2380.SNP.4:27148941 chr04:027148941 0 W/27148941-27148941 FN2380 SNP G -> T AC=1;AN=192;BQB=0.951485;DP=3536;DP4=980,2270,4,17;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.141686;MQB=0.999338;MQSB=0;RPB=0.325535;SGB=-63.0652;VDB=0.725006;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.4:27150966 chr04:027150966 0 W/27150966-27150966 FN2419 SNP C -> A AC=1;AN=200;BQB=0.959037;DP=4751;DP4=2377,2040,18,12;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.233635;MQB=0.642995;MQSB=2.05347e-10;RPB=0.322262;SGB=-75.0485;VDB=0.924216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.4:27160620 chr04:027160620 0 W/27160620-27160620 FN3387-S SNP A -> G AC=2;AN=184;BQB=0.998013;DP=3130;DP4=1307,1665,6,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.13092e-15;MQSB=0.956545;RPB=0.308671;SGB=116.569;VDB=0.399721;EFF=INTRON(MODIFIER||||148|LOC_Os04g45870|protein_coding|CODING|LOC_Os04g45870.1|1|1) FN862-S.SNP.4:27163100 chr04:027163100 0 W/27163100-27163100 FN862-S Single Base Substitution G-C INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN4172-S.SNP.4:27173822 chr04:027173822 0 W/27173822-27173822 FN4172-S SNP G -> A AC=1;AN=170;BQB=0.962349;DP=2651;DP4=1142,1442,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000377216;MQB=1.3013e-08;MQSB=0.468998;RPB=0.516841;SGB=56.7575;VDB=0.0580568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.4:27174440 chr04:027174440 0 W/27174440-27174440 FN1220-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN3716-S.SNP.4:27176596 chr04:027176596 0 W/27176596-27176596 FN3716-S SNP G -> A AC=1;AN=190;BQB=0.711324;DP=2569;DP4=1258,1237,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000772272;MQSB=0.635623;RPB=0.954733;SGB=35.4339;VDB=0.707824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.4:27186900 chr04:027186900 0 W/27186900-27186900 FN2192-S SNP G -> T AC=1;AN=190;BQB=0.276765;DP=3881;DP4=1586,2046,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.09587e-06;MQSB=0.0630268;RPB=0.999428;SGB=57.4238;VDB=0.263684;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A119|675|LOC_Os04g45900|protein_coding|CODING|LOC_Os04g45900.1|2|1) FN929-S.SNP.4:27192737 chr04:027192737 0 W/27192737-27192737 FN929-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g45910 placental protein 11 precursor, putative, expressed SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2591-S.SNP.4:27192905 chr04:027192905 0 W/27192905-27192905 FN2591-S SNP A -> G AC=1;AN=198;BQB=0.903113;DP=4549;DP4=2075,2236,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07201e-09;MQSB=0.852929;RPB=0.144591;SGB=43.7442;VDB=0.0100638;EFF=INTRON(MODIFIER||||519|LOC_Os04g45910|protein_coding|CODING|LOC_Os04g45910.1|5|1) FN2639-S.SNP.4:27193351 chr04:027193351 0 W/27193351-27193351 FN2639-S SNP C -> A AC=1;AN=200;BQB=0.704933;DP=5284;DP4=2549,2417,21,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2061e-24;MQSB=0.936627;RPB=0.790279;SGB=92.009;VDB=0.0991883;EFF=INTRON(MODIFIER||||519|LOC_Os04g45910|protein_coding|CODING|LOC_Os04g45910.1|5|1) FN3945-S.SNP.4:27195816 chr04:027195816 0 W/27195816-27195816 FN3945-S SNP C -> T AC=1;AN=168;BQB=0.806252;DP=2814;DP4=1432,1268,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.57777e-09;MQSB=0.912214;RPB=0.882834;SGB=41.6096;VDB=0.642606;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R207|458|LOC_Os04g45920|protein_coding|CODING|LOC_Os04g45920.1|2|1) FN1410-S.SNP.4:27205600 chr04:027205600 0 W/27205600-27205600 FN1410-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN708-S.SNP.4:27205963 chr04:027205963 0 W/27205963-27205963 FN708-S Single Base Substitution A-T INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4145-S.SNP.4:27213297 chr04:027213297 0 W/27213297-27213297 FN4145-S SNP T -> G AC=1;AN=170;BQB=0.872874;DP=2803;DP4=1194,1450,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.90999e-10;MQSB=0.994214;RPB=0.308901;SGB=62.4192;VDB=0.510654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.4:27223941 chr04:027223941 0 W/27223941-27223941 FN2609-S SNP A -> G AC=2;AN=198;BQB=0.870737;DP=4745;DP4=2333,2086,40,40;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.72623e-44;MQSB=0.974414;RPB=0.999171;SGB=311.845;VDB=0.128575;EFF=INTRON(MODIFIER||||836|LOC_Os04g45960|protein_coding|CODING|LOC_Os04g45960.1|5|1) FN318-S.SNP.4:27227829 chr04:027227829 0 W/27227829-27227829 FN318-S Single Base Substitution A-G INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2596-S.SNP.4:27233470 chr04:027233470 0 W/27233470-27233470 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.99957;DP=4040;DP4=1849,2002,13,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.77265e-23;MQSB=0.701926;RPB=0.230471;SGB=140.812;VDB=0.562955;EFF=START_GAINED(LOW||||216|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.2|1|1),START_GAINED(LOW||||222|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.1|1|1),UTR_5_PRIME(MODIFIER||443||216|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.2|1|1),UTR_5_PRIME(MODIFIER||2720||222|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.1|1|1) FN2771-S.SNP.4:27234594 chr04:027234594 0 W/27234594-27234594 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.920657;DP=4332;DP4=1987,2076,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.37986e-05;MQSB=0.902429;RPB=0.572647;SGB=22.1736;VDB=0.429958;EFF=INTRON(MODIFIER||||222|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.1|2|1),INTRON(MODIFIER||||216|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.2|2|1) FN3598-S.SNP.4:27237986 chr04:027237986 0 W/27237986-27237986 FN3598-S SNP T -> A AC=2;AN=188;BQB=0.956182;DP=2853;DP4=1381,1356,16,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.24484e-15;MQSB=0.968096;RPB=0.562748;SGB=74.9605;VDB=0.894122;EFF=UTR_3_PRIME(MODIFIER||191||222|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.1|9|1) FN3598-S.SNP.4:27237987 chr04:027237987 0 W/27237987-27237987 FN3598-S SNP G -> A AC=2;AN=188;BQB=0.864159;DP=2852;DP4=1386,1361,16,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01931e-13;MQSB=0.998338;RPB=0.701479;SGB=98.9552;VDB=0.931382;EFF=UTR_3_PRIME(MODIFIER||192||222|LOC_Os04g45970|protein_coding|CODING|LOC_Os04g45970.1|9|1) FN2258-S.SNP.4:27247797 chr04:027247797 0 W/27247797-27247797 FN2258-S SNP C -> T AC=1;AN=190;BQB=0.772218;DP=3539;DP4=1864,1420,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.95465e-05;MQSB=1.2649e-06;RPB=0.98768;SGB=35.4339;VDB=0.951216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.4:27250874 chr04:027250874 0 W/27250874-27250874 FN2283 SNP G -> A AC=1;AN=192;BQB=0.904679;DP=5031;DP4=2191,2488,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.73152e-19;MQSB=0.998811;RPB=0.969532;SGB=114.631;VDB=0.431161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.4:27250912 chr04:027250912 0 W/27250912-27250912 FN3599-S SNP G -> T AC=1;AN=188;BQB=0.807823;DP=3028;DP4=1362,1571,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.01658e-08;MQSB=0.561821;RPB=0.76795;SGB=39.5276;VDB=0.441075;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.4:27255574 chr04:027255574 0 W/27255574-27255574 FN-144 Single Base Substitution T-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-117.SNP.4:27261419 chr04:027261419 0 W/27261419-27261419 FN-117 Single Base Substitution C-T INTRON HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN1517-S.SNP.4:27269884 chr04:027269884 0 W/27269884-27269884 FN1517-S Single Base Substitution A-G INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2634-S.SNP.4:27270079 chr04:027270079 0 W/27270079-27270079 FN2634-S SNP A -> T AC=2;AN=200;BQB=0.354589;DP=4804;DP4=2194,2388,26,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.50074e-30;MQSB=0.932505;RPB=0.911219;SGB=115.456;VDB=0.248849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.4:27280873 chr04:027280873 0 W/27280873-27280873 FN3652-S SNP C -> T AC=2;AN=190;BQB=0.863489;DP=3065;DP4=1472,1475,6,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.67654e-07;MQSB=0.98783;RPB=0.963108;SGB=58.2031;VDB=0.243468;EFF=INTRON(MODIFIER||||497|LOC_Os04g46050|protein_coding|CODING|LOC_Os04g46050.1|6|1),INTRON(MODIFIER||||458|LOC_Os04g46050|protein_coding|CODING|LOC_Os04g46050.2|7|1),INTRON(MODIFIER||||455|LOC_Os04g46050|protein_coding|CODING|LOC_Os04g46050.3|7|1) FN4204-S.SNP.4:27286272 chr04:027286272 0 W/27286272-27286272 FN4204-S SNP A -> G AC=1;AN=170;BQB=0.89864;DP=2401;DP4=1288,993,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.29757e-06;MQSB=0.00134904;RPB=0.383709;SGB=38.987;VDB=0.0797974;EFF=INTRON(MODIFIER||||250|LOC_Os04g46060|protein_coding|CODING|LOC_Os04g46060.1|3|1) FN1540-S.SNP.4:27287594 chr04:027287594 0 W/27287594-27287594 FN1540-S Single Base Substitution T-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN_552-1-1.SNP.4:27288265 chr04:027288265 0 W/27288265-27288265 FN_552-1-1 Single Base Substitution A-T Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1193-S.SNP.4:27296730 chr04:027296730 0 W/27296730-27296730 FN1193-S Single Base Substitution C-T INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN594-S.SNP.4:27304945 chr04:027304945 0 W/27304945-27304945 FN594-S Single Base Substitution C-T INTRON HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN-212.SNP.4:27331286 chr04:027331286 0 W/27331286-27331286 FN-212 Single Base Substitution G-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1638-S.SNP.4:27331286 chr04:027331286 0 W/27331286-27331286 FN1638-S Single Base Substitution G-A INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN897-S.SNP.4:27331286 chr04:027331286 0 W/27331286-27331286 FN897-S Single Base Substitution G-A INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3664-S.SNP.4:27335682 chr04:027335682 0 W/27335682-27335682 FN3664-S SNP T -> A AC=1;AN=190;BQB=0.698686;DP=2908;DP4=1174,1508,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.91227e-11;MQSB=0.518539;RPB=0.222206;SGB=54.3062;VDB=0.12491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.4:27339915 chr04:027339915 0 W/27339915-27339915 FN2279-S SNP A -> G AC=1;AN=190;BQB=0.554891;DP=4154;DP4=1823,1971,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00987;MQB=0.0341838;MQSB=1.72394e-16;RPB=0.990972;SGB=21.1058;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.4:27353068 chr04:027353068 0 W/27353068-27353068 FN2465 SNP G -> A AC=1;AN=200;BQB=0.435611;DP=4925;DP4=2388,2127,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.24677e-07;MQSB=0.210067;RPB=0.678487;SGB=21.6694;VDB=0.670313;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.4:27355349 chr04:027355349 0 W/27355349-27355349 FN-149 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g46180 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2218-S.SNP.4:27356244 chr04:027356244 0 W/27356244-27356244 FN2218-S SNP T -> A AC=1;AN=190;BQB=0.631068;DP=5102;DP4=2302,2523,12,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000196002;MQB=2.28493e-16;MQSB=0.994589;RPB=0.960722;SGB=59.414;VDB=0.783017;EFF=INTRON(MODIFIER||||695|LOC_Os04g46180|protein_coding|CODING|LOC_Os04g46180.1|3|1),INTRON(MODIFIER||||695|LOC_Os04g46180|protein_coding|CODING|LOC_Os04g46180.2|3|1) FN-62.SNP.4:27364897 chr04:027364897 0 W/27364897-27364897 FN-62 Single Base Substitution A-G INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2719-S.SNP.4:27366290 chr04:027366290 0 W/27366290-27366290 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.506612;DP=5097;DP4=2555,2308,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49405e-08;MQSB=0.993311;RPB=0.992033;SGB=6.27959;VDB=0.666526;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.4:27375549 chr04:027375549 0 W/27375549-27375549 FN867-S Single Base Substitution C-A INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN1310-S.SNP.4:27380156 chr04:027380156 0 W/27380156-27380156 FN1310-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN4184-S.SNP.4:27387294 chr04:027387294 0 W/27387294-27387294 FN4184-S SNP A -> G AC=2;AN=170;BQB=0.993333;DP=2213;DP4=1106,1059,10,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.02328e-08;MQSB=0.740303;RPB=0.420931;SGB=61.2001;VDB=0.336237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.4:27390875 chr04:027390875 0 W/27390875-27390875 FN2560-S SNP A -> G AC=2;AN=198;BQB=0.244415;DP=4367;DP4=2054,1983,9,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.01272e-09;MQSB=0.90778;RPB=0.920686;SGB=90.9049;VDB=0.778946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.4:27398363 chr04:027398363 0 W/27398363-27398363 FN4110-S SNP G -> A AC=1;AN=182;BQB=0.796721;DP=3269;DP4=1523,1651,6,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.45762e-10;MQSB=0.801827;RPB=0.722467;SGB=56.6929;VDB=0.718172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G21S|318|LOC_Os04g46240|protein_coding|CODING|LOC_Os04g46240.1|1|1) FN2434.SNP.4:27402153 chr04:027402153 0 W/27402153-27402153 FN2434 SNP C -> T AC=1;AN=200;BQB=0.643543;DP=3227;DP4=1677,1162,5,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00526805;MQB=0.00746294;MQSB=2.38862e-07;RPB=0.958126;SGB=40.4492;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.4:27402153 chr04:027402153 0 W/27402153-27402153 FN3326-S SNP C -> T AC=2;AN=184;BQB=0.319863;DP=3478;DP4=1657,1690,17,15;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00316274;MQB=1.87342e-09;MQSB=0.0163741;RPB=0.663834;SGB=102.662;VDB=0.519568;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.4:27402153 chr04:027402153 0 W/27402153-27402153 FN_949-1 Single Base Substitution C-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN2395.SNP.4:27403840 chr04:027403840 0 W/27403840-27403840 FN2395 SNP A -> G AC=1;AN=200;BQB=0.94443;DP=4547;DP4=2519,1789,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49861e-12;MQSB=0.841467;RPB=0.970281;SGB=109.527;VDB=0.80658;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.4:27406812 chr04:027406812 0 W/27406812-27406812 FN-110 Single Base Substitution A-G INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN908-S.SNP.4:27408801 chr04:027408801 0 W/27408801-27408801 FN908-S Single Base Substitution T-A INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3930-S.SNP.4:27415322 chr04:027415322 0 W/27415322-27415322 FN3930-S SNP C -> T AC=2;AN=158;BQB=0.999511;DP=2661;DP4=1273,1219,13,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.74182e-11;MQSB=0.53994;RPB=0.850436;SGB=90.7616;VDB=0.92832;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.4:27415322 chr04:027415322 0 W/27415322-27415322 FN536-S Single Base Substitution C-T INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.4:27415322 chr04:027415322 0 W/27415322-27415322 FN727-S Single Base Substitution C-T INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.4:27415322 chr04:027415322 0 W/27415322-27415322 FN867-S Single Base Substitution C-T INTERGENIC HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN3855-S.SNP.4:27415384 chr04:027415384 0 W/27415384-27415384 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.793487;DP=2821;DP4=1518,1222,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.91828e-05;MQSB=0.89742;RPB=0.991963;SGB=37.4429;VDB=0.694132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.4:27415407 chr04:027415407 0 W/27415407-27415407 FN2272-S SNP G -> A AC=1;AN=190;BQB=0.706829;DP=4432;DP4=1928,2182,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.58727e-16;MQSB=0.814173;RPB=0.122357;SGB=72.1834;VDB=0.567825;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.4:27415407 chr04:027415407 0 W/27415407-27415407 FN910-S Single Base Substitution G-A INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2276-S.SNP.4:27417725 chr04:027417725 0 W/27417725-27417725 FN2276-S SNP T -> A AC=2;AN=190;BQB=0.82544;DP=4638;DP4=2063,2242,18,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.22469e-24;MQSB=0.999732;RPB=0.754672;SGB=142.717;VDB=0.0610643;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-1.SNP.4:27421361 chr04:027421361 0 W/27421361-27421361 FN_398-1 Single Base Substitution G-T INTRON HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN3442-S.SNP.4:27421542 chr04:027421542 0 W/27421542-27421542 FN3442-S SNP C -> T AC=1;AN=184;BQB=0.894919;DP=3656;DP4=1786,1765,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34611e-09;MQSB=0.942543;RPB=0.962208;SGB=62.3078;VDB=0.0274091;EFF=INTRON(MODIFIER||||421|LOC_Os04g46270|protein_coding|CODING|LOC_Os04g46270.1|2|1) FN-140.SNP.4:27425187 chr04:027425187 0 W/27425187-27425187 FN-140 Single Base Substitution C-A INTRON HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN239-S.SNP.4:27430028 chr04:027430028 0 W/27430028-27430028 FN239-S Single Base Substitution T-A INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. W607-2-1.SNP.4:27434851 chr04:027434851 0 W/27434851-27434851 W607-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN439-S.SNP.4:27437110 chr04:027437110 0 W/27437110-27437110 FN439-S Single Base Substitution G-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN632-S.SNP.4:27437975 chr04:027437975 0 W/27437975-27437975 FN632-S Single Base Substitution A-C INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1419-S.SNP.4:27438291 chr04:027438291 0 W/27438291-27438291 FN1419-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3297-S.SNP.4:27439286 chr04:027439286 0 W/27439286-27439286 FN3297-S SNP G -> A AC=2;AN=184;BQB=0.571793;DP=2417;DP4=1379,911,16,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=2.54597e-09;MQSB=7.63056e-05;RPB=0.997143;SGB=112.047;VDB=0.063287;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.4:27440708 chr04:027440708 0 W/27440708-27440708 FN4122-S SNP A -> G AC=2;AN=182;BQB=0.536525;DP=3212;DP4=1537,1596,11,18;HOB=0.0217365;ICB=0.494567;MQ=43;MQ0F=0.0273973;MQB=0.0188029;MQSB=4.8009e-09;RPB=0.601785;SGB=58.2961;VDB=0.832687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN-166 Single Base Substitution G-T INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-37.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN-37 Single Base Substitution G-T INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1348-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN1348-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1707-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN1707-S SNP G -> T AC=2;AN=188;BQB=0.839943;DP=3860;DP4=1942,1880,9,17;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000777202;MQB=6.66348e-12;MQSB=6.10086e-11;RPB=0.105232;SGB=20.9711;VDB=0.698035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN2261-S SNP G -> T AC=1;AN=190;BQB=0.885816;DP=5074;DP4=2421,2297,19,31;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000197083;MQB=3.44358e-23;MQSB=0.884162;RPB=0.901454;SGB=222.143;VDB=0.628122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN2749-S SNP G -> T AC=1;AN=200;BQB=0.938865;DP=4838;DP4=2364,2255,9,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000206697;MQB=5.6333e-12;MQSB=0.960501;RPB=0.583103;SGB=69.1109;VDB=0.288065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN3437-S SNP G -> T AC=2;AN=184;BQB=0.992989;DP=2663;DP4=1189,1390,9,14;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=4.67315e-11;MQSB=0.313847;RPB=0.995278;SGB=98.4821;VDB=0.185605;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.4:27441010 chr04:027441010 0 W/27441010-27441010 FN4078-S SNP G -> T AC=2;AN=182;BQB=0.528591;DP=2700;DP4=1175,1449,11,9;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00037037;MQB=4.44586e-09;MQSB=0.978525;RPB=0.629898;SGB=60.2037;VDB=0.657065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.4:27445257 chr04:027445257 0 W/27445257-27445257 FN2366 SNP A -> G AC=2;AN=192;BQB=0.793336;DP=4843;DP4=2422,2078,24,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.01917e-23;MQSB=0.931553;RPB=0.236551;SGB=167.883;VDB=0.663421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S158G|2142|LOC_Os04g46310|protein_coding|CODING|LOC_Os04g46310.1|4|1) FN2366.SNP.4:27445258 chr04:027445258 0 W/27445258-27445258 FN2366 SNP G -> A AC=2;AN=192;BQB=0.510514;DP=4837;DP4=2436,2079,27,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.50144e-26;MQSB=0.90469;RPB=0.16677;SGB=48.0279;VDB=0.495687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S158N|2142|LOC_Os04g46310|protein_coding|CODING|LOC_Os04g46310.1|4|1) FN1732-S.SNP.4:27457457 chr04:027457457 0 W/27457457-27457457 FN1732-S SNP T -> A AC=1;AN=188;BQB=0.975885;DP=3647;DP4=1861,1754,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.1684e-09;MQSB=0.99625;RPB=0.88416;SGB=43.0708;VDB=0.928745;EFF=INTRON(MODIFIER||||2142|LOC_Os04g46310|protein_coding|CODING|LOC_Os04g46310.1|36|1),INTRON(MODIFIER||||590|LOC_Os04g46310|protein_coding|CODING|LOC_Os04g46310.2|3|1) FN3791-S.SNP.4:27460645 chr04:027460645 0 W/27460645-27460645 FN3791-S SNP T -> G AC=1;AN=190;BQB=0.633962;DP=2549;DP4=1309,1159,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.37886e-08;MQSB=0.996192;RPB=0.939931;SGB=49.0954;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.4:27461211 chr04:027461211 0 W/27461211-27461211 FN2721-S SNP A -> C AC=1;AN=200;BQB=0.996633;DP=4972;DP4=2453,2297,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.17529e-13;MQSB=0.993818;RPB=0.934451;SGB=69.1109;VDB=0.629359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgT/tgG|C349W|371|LOC_Os04g46320|protein_coding|CODING|LOC_Os04g46320.1|2|1) FN442-S.SNP.4:27463923 chr04:027463923 0 W/27463923-27463923 FN442-S Single Base Substitution T-C INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN2309.SNP.4:27464345 chr04:027464345 0 W/27464345-27464345 FN2309 SNP T -> A AC=2;AN=192;BQB=0.999339;DP=5201;DP4=2627,2234,18,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.80006e-19;MQSB=0.590887;RPB=0.916828;SGB=41.7705;VDB=0.69533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.4:27466384 chr04:027466384 0 W/27466384-27466384 FN2496 SNP A -> C AC=2;AN=200;BQB=0.999317;DP=4178;DP4=1978,1880,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.90436e-22;MQSB=0.504349;RPB=0.779229;SGB=173.999;VDB=0.2431;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.4:27471659 chr04:027471659 0 W/27471659-27471659 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.985386;DP=2077;DP4=874,1056,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=5.56985e-08;MQSB=0.505652;RPB=0.884673;SGB=48.6486;VDB=0.236607;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.4:27491433 chr04:027491433 0 W/27491433-27491433 FN895-S Single Base Substitution G-A INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3817-S.SNP.4:27504832 chr04:027504832 0 W/27504832-27504832 FN3817-S SNP T -> C AC=1;AN=190;BQB=0.994902;DP=3259;DP4=1360,1741,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.77049e-09;MQSB=0.927174;RPB=0.956805;SGB=46.7622;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.4:27513595 chr04:027513595 0 W/27513595-27513595 FN4149-S SNP C -> A AC=1;AN=170;BQB=0.951813;DP=2553;DP4=1260,1204,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00117509;MQB=0.0276313;MQSB=0.214727;RPB=0.38732;SGB=34.5445;VDB=0.257627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.4:27521535 chr04:027521535 0 W/27521535-27521535 FN2281 SNP A -> G AC=1;AN=192;BQB=0.815915;DP=4472;DP4=2150,1924,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.3334e-09;MQSB=0.999617;RPB=0.992395;SGB=46.9087;VDB=0.977612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.4:27522158 chr04:027522158 0 W/27522158-27522158 FN3927-S SNP T -> A AC=1;AN=158;BQB=0.906365;DP=2253;DP4=1069,1064,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.16615e-10;MQSB=0.89395;RPB=0.948869;SGB=68.9144;VDB=0.309748;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.4:27524873 chr04:027524873 0 W/27524873-27524873 FN689-S Single Base Substitution T-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1666-S.SNP.4:27525153 chr04:027525153 0 W/27525153-27525153 FN1666-S SNP A -> G AC=1;AN=188;BQB=0.0906292;DP=3630;DP4=1720,1869,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.11142e-11;MQSB=0.971512;RPB=0.552137;SGB=-40.1048;VDB=0.348632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.4:27532356 chr04:027532356 0 W/27532356-27532356 FN2422 SNP G -> A AC=2;AN=200;BQB=0.531619;DP=4825;DP4=1927,2529,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.17331e-24;MQSB=0.472662;RPB=0.932523;SGB=99.8245;VDB=0.723562;EFF=INTERGENIC(MODIFIER||||||||||1) FN789-S.SNP.4:27533152 chr04:027533152 0 W/27533152-27533152 FN789-S Single Base Substitution C-A INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN4100-S.SNP.4:27535630 chr04:027535630 0 W/27535630-27535630 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.959743;DP=3148;DP4=1765,1320,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.00302e-10;MQSB=0.827995;RPB=0.998745;SGB=66.6657;VDB=0.82696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.4:27538015 chr04:027538015 0 W/27538015-27538015 FN1757-S SNP A -> T AC=1;AN=188;BQB=0.930155;DP=3865;DP4=2121,1718,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.5512e-07;MQSB=0.99814;RPB=0.736144;SGB=39.8925;VDB=0.0461494;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.4:27539425 chr04:027539425 0 W/27539425-27539425 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-158.SNP.4:27540752 chr04:027540752 0 W/27540752-27540752 FN-158 Single Base Substitution C-T UTR_3_PRIME HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1435-S.SNP.4:27543579 chr04:027543579 0 W/27543579-27543579 FN1435-S Single Base Substitution A-G INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1516-S.SNP.4:27544994 chr04:027544994 0 W/27544994-27544994 FN1516-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2242-S.SNP.4:27556720 chr04:027556720 0 W/27556720-27556720 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.1896;DP=4901;DP4=2377,2207,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.42875e-05;MQSB=0.849654;RPB=0.994718;SGB=21.8853;VDB=0.98284;EFF=INTRON(MODIFIER||||884|LOC_Os04g46450|protein_coding|CODING|LOC_Os04g46450.1|4|1) FN2358.SNP.4:27563010 chr04:027563010 0 W/27563010-27563010 FN2358 SNP C -> T AC=1;AN=192;BQB=0.714807;DP=5125;DP4=2105,2751,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.57836e-13;MQSB=0.399602;RPB=0.788865;SGB=22.9983;VDB=0.288866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.4:27576975 chr04:027576975 0 W/27576975-27576975 FN1666-S SNP A -> G AC=1;AN=188;BQB=0.0323884;DP=2208;DP4=1114,1058,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.60732e-05;MQSB=0.792366;RPB=0.520159;SGB=-14.4565;VDB=0.990211;EFF=UTR_5_PRIME(MODIFIER||56||269|LOC_Os04g46490|protein_coding|CODING|LOC_Os04g46490.1|1|1) FN4083-S.SNP.4:27577673 chr04:027577673 0 W/27577673-27577673 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.973978;DP=2970;DP4=1513,1358,15,11;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.00707071;MQB=2.53009e-10;MQSB=2.23656e-11;RPB=0.945085;SGB=111.774;VDB=0.134146;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.4:27580468 chr04:027580468 0 W/27580468-27580468 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN_398-1.SNP.4:27583120 chr04:027583120 0 W/27583120-27583120 FN_398-1 Single Base Substitution G-A INTRON HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN2702-S.SNP.4:27585142 chr04:027585142 0 W/27585142-27585142 FN2702-S SNP C -> A AC=1;AN=200;BQB=0.998357;DP=5055;DP4=2562,2245,5,4;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0767557;MQB=0.987705;MQSB=8.60193e-07;RPB=0.951036;SGB=35.8441;VDB=0.751441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.4:27586977 chr04:027586977 0 W/27586977-27586977 FN1533-S Single Base Substitution C-A STOP_GAINED Homo LOC_Os04g46510 transposon protein, putative, unclassified, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN2730-S.SNP.4:27587401 chr04:027587401 0 W/27587401-27587401 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.501078;DP=4590;DP4=2068,2284,8,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00261438;MQB=1.58856e-05;MQSB=1.24597e-05;RPB=0.989404;SGB=63.4749;VDB=0.318138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A549T|787|LOC_Os04g46510|protein_coding|CODING|LOC_Os04g46510.1|2|1) W247-2-1.SNP.4:27587980 chr04:027587980 0 W/27587980-27587980 W247-2-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g46510 transposon protein, putative, unclassified, expressed SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN-177.SNP.4:27592061 chr04:027592061 0 W/27592061-27592061 FN-177 Single Base Substitution G-A INTERGENIC HOMO SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN2577-S.SNP.4:27595226 chr04:027595226 0 W/27595226-27595226 FN2577-S SNP G -> A AC=2;AN=198;BQB=0.964903;DP=3876;DP4=1983,1662,12,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000257998;MQB=3.24291e-11;MQSB=0.904959;RPB=0.726871;SGB=86.3098;VDB=0.868655;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D91|626|LOC_Os04g46530|protein_coding|CODING|LOC_Os04g46530.1|3|1) FN4039-S.SNP.4:27596865 chr04:027596865 0 W/27596865-27596865 FN4039-S SNP C -> A AC=1;AN=168;BQB=0.80662;DP=2618;DP4=1237,1272,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.2701e-10;MQSB=0.528692;RPB=0.804952;SGB=36.7696;VDB=0.993877;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.4:27603456 chr04:027603456 0 W/27603456-27603456 FN940-S Single Base Substitution C-T INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1272-S.SNP.4:27604008 chr04:027604008 0 W/27604008-27604008 FN1272-S Single Base Substitution G-C INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN883-S.SNP.4:27607057 chr04:027607057 0 W/27607057-27607057 FN883-S Single Base Substitution G-A INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN-247.SNP.4:27610504 chr04:027610504 0 W/27610504-27610504 FN-247 Single Base Substitution C-A INTRON HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3819-S.SNP.4:27616430 chr04:027616430 0 W/27616430-27616430 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.619278;DP=2485;DP4=1200,1167,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.3926e-07;MQSB=0.72264;RPB=0.955357;SGB=43.2083;VDB=0.991318;EFF=INTRON(MODIFIER||||360|LOC_Os04g46580|protein_coding|CODING|LOC_Os04g46580.1|2|1) FN2432.SNP.4:27620253 chr04:027620253 0 W/27620253-27620253 FN2432 SNP A -> G AC=1;AN=200;BQB=0.959873;DP=3119;DP4=820,1966,4,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.16087e-07;MQSB=1.67809e-25;RPB=0.949765;SGB=26.8797;VDB=0.959025;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.4:27620660 chr04:027620660 0 W/27620660-27620660 FN1195-S Single Base Substitution T-C INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1466-S.SNP.4:27621532 chr04:027621532 0 W/27621532-27621532 FN1466-S Single Base Substitution G-A INTERGENIC Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN-269.SNP.4:27622172 chr04:027622172 0 W/27622172-27622172 FN-269 Single Base Substitution G-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3804-S.SNP.4:27631527 chr04:027631527 0 W/27631527-27631527 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.858736;DP=2533;DP4=1387,1049,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.79059e-07;MQSB=0.98126;RPB=0.685768;SGB=49.0954;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.4:27631976 chr04:027631976 0 W/27631976-27631976 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.810322;DP=4664;DP4=1962,2394,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.53864e-20;MQSB=0.999523;RPB=0.39352;SGB=65.9573;VDB=0.121297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.4:27632345 chr04:027632345 0 W/27632345-27632345 FN2397 SNP C -> T AC=1;AN=200;BQB=0.530726;DP=4863;DP4=2090,2502,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11592e-15;MQSB=0.999474;RPB=0.743142;SGB=94.3471;VDB=0.940204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.4:27632645 chr04:027632645 0 W/27632645-27632645 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.97535;DP=2907;DP4=1585,1261,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52068e-05;MQSB=0.96057;RPB=0.450668;SGB=30.6558;VDB=0.704352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.4:27634279 chr04:027634279 0 W/27634279-27634279 FN2593-S SNP A -> T AC=2;AN=198;BQB=0.441769;DP=4372;DP4=1981,2103,22,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.37472e-22;MQSB=0.978326;RPB=0.914868;SGB=4.01782;VDB=0.376725;EFF=INTRON(MODIFIER||||221|LOC_Os04g46610|protein_coding|CODING|LOC_Os04g46610.1|3|1),INTRON(MODIFIER||||221|LOC_Os04g46610|protein_coding|CODING|LOC_Os04g46610.2|4|1) FN-181.SNP.4:27648631 chr04:027648631 0 W/27648631-27648631 FN-181 Single Base Substitution G-C INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN4100-S.SNP.4:27649471 chr04:027649471 0 W/27649471-27649471 FN4100-S SNP T -> G AC=1;AN=182;BQB=0.989716;DP=3175;DP4=1193,1873,9,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.31813e-13;MQSB=0.954013;RPB=0.363029;SGB=77.758;VDB=0.856609;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.4:27649576 chr04:027649576 0 W/27649576-27649576 FN904-S Single Base Substitution A-G INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2554-S.SNP.4:27651266 chr04:027651266 0 W/27651266-27651266 FN2554-S SNP T -> C AC=1;AN=198;BQB=0.424087;DP=4403;DP4=2065,1983,5,19;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00158983;MQB=0.000760432;MQSB=0.653086;RPB=0.636544;SGB=76.1002;VDB=0.683677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.4:27654242 chr04:027654242 0 W/27654242-27654242 FN1060-S Single Base Substitution A-G INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1384-S.SNP.4:27656234 chr04:027656234 0 W/27656234-27656234 FN1384-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g46650 expansin precursor, putative, expressed SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2492.SNP.4:27660060 chr04:027660060 0 W/27660060-27660060 FN2492 SNP G -> T AC=1;AN=200;BQB=0.0301235;DP=2925;DP4=1279,1227,5,16;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00136752;MQB=2.48762e-05;MQSB=3.13948e-17;RPB=0.000414646;SGB=-190.496;VDB=0.375791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.4:27660979 chr04:027660979 0 W/27660979-27660979 FN3610-S SNP T -> C AC=1;AN=190;BQB=0.903209;DP=3066;DP4=1502,1439,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.1023e-10;MQSB=0.905945;RPB=0.978262;SGB=33.8752;VDB=0.102961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.4:27669166 chr04:027669166 0 W/27669166-27669166 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.42428;DP=4476;DP4=1805,2293,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.194147;MQB=0.768563;MQSB=0;RPB=0.48272;SGB=11.8805;VDB=0.837236;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.4:27672477 chr04:027672477 0 W/27672477-27672477 FN781-S Single Base Substitution G-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1640-S.SNP.4:27673401 chr04:027673401 0 W/27673401-27673401 FN1640-S Single Base Substitution C-T INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN3695-S.SNP.4:27679421 chr04:027679421 0 W/27679421-27679421 FN3695-S SNP C -> A AC=2;AN=190;BQB=0.98949;DP=2742;DP4=1178,1467,17,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.79108e-17;MQSB=0.852258;RPB=0.955995;SGB=96.5165;VDB=0.817792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.4:27679859 chr04:027679859 0 W/27679859-27679859 FN1118-S Single Base Substitution G-A INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1065-S.SNP.4:27689346 chr04:027689346 0 W/27689346-27689346 FN1065-S Single Base Substitution A-G INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN-304.SNP.4:27690026 chr04:027690026 0 W/27690026-27690026 FN-304 Single Base Substitution C-T INTERGENIC HOMO SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1321-S.SNP.4:27690907 chr04:027690907 0 W/27690907-27690907 FN1321-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3711-S.SNP.4:27691914 chr04:027691914 0 W/27691914-27691914 FN3711-S SNP A -> G AC=1;AN=190;BQB=0.726567;DP=3200;DP4=1314,1759,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05638e-07;MQSB=0.999518;RPB=0.643405;SGB=71.8647;VDB=0.382875;EFF=UTR_3_PRIME(MODIFIER||222||249|LOC_Os04g46700|protein_coding|CODING|LOC_Os04g46700.2|1|1),UTR_3_PRIME(MODIFIER||222||249|LOC_Os04g46700|protein_coding|CODING|LOC_Os04g46700.1|1|1) FN1531-S.SNP.4:27692997 chr04:027692997 0 W/27692997-27692997 FN1531-S Single Base Substitution T-C INTRON Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN3283-S.SNP.4:27693360 chr04:027693360 0 W/27693360-27693360 FN3283-S SNP T -> A AC=2;AN=184;BQB=1.75211e-06;DP=2647;DP4=1321,1210,7,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.04709e-08;MQSB=0.901484;RPB=0.959354;SGB=53.2642;VDB=0.810519;EFF=INTRON(MODIFIER||||249|LOC_Os04g46700|protein_coding|CODING|LOC_Os04g46700.1|1|1),INTRON(MODIFIER||||249|LOC_Os04g46700|protein_coding|CODING|LOC_Os04g46700.2|2|1) FN2719-S.SNP.4:27706483 chr04:027706483 0 W/27706483-27706483 FN2719-S SNP T -> A AC=1;AN=200;BQB=0.982147;DP=4689;DP4=2412,2103,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.41463e-06;MQSB=0.91406;RPB=0.836122;SGB=35.8441;VDB=0.456982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.4:27709676 chr04:027709676 0 W/27709676-27709676 FN3425-S SNP C -> T AC=2;AN=184;BQB=0.992566;DP=2623;DP4=1418,1094,27,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.55807e-21;MQSB=0.971827;RPB=0.959026;SGB=178.936;VDB=0.994007;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.4:27716392 chr04:027716392 0 W/27716392-27716392 FN754-S Single Base Substitution G-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2529-S.SNP.4:27719551 chr04:027719551 0 W/27719551-27719551 FN2529-S SNP T -> C AC=2;AN=198;BQB=0.997917;DP=3914;DP4=1931,1674,19,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.6096e-12;MQSB=0.940476;RPB=0.998404;SGB=83.2905;VDB=0.491428;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.4:27721432 chr04:027721432 0 W/27721432-27721432 FN867-S Single Base Substitution C-T INTRON HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN-262.SNP.4:27725204 chr04:027725204 0 W/27725204-27725204 FN-262 Single Base Substitution G-A INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1340-S.SNP.4:27725275 chr04:027725275 0 W/27725275-27725275 FN1340-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN-194.SNP.4:27730867 chr04:027730867 0 W/27730867-27730867 FN-194 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g46770 transposon protein, putative, unclassified, expressed SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3886-S.SNP.4:27736642 chr04:027736642 0 W/27736642-27736642 FN3886-S SNP G -> A AC=2;AN=158;BQB=0.933375;DP=2474;DP4=1109,1238,11,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.12584e-16;MQSB=0.722357;RPB=0.565018;SGB=121.348;VDB=0.835102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P171S|223|LOC_Os04g46790|protein_coding|CODING|LOC_Os04g46790.1|1|1) FN-145.SNP.4:27742348 chr04:027742348 0 W/27742348-27742348 FN-145 Single Base Substitution C-G INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN778-S.SNP.4:27742565 chr04:027742565 0 W/27742565-27742565 FN778-S Single Base Substitution T-G INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2573-S.SNP.4:27744879 chr04:027744879 0 W/27744879-27744879 FN2573-S SNP T -> C AC=1;AN=198;BQB=0.977826;DP=4440;DP4=2266,1939,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.44453e-08;MQSB=0.999523;RPB=0.737898;SGB=24.1541;VDB=0.742814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.4:27758729 chr04:027758729 0 W/27758729-27758729 FN1302-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN974-S.SNP.4:27763545 chr04:027763545 0 W/27763545-27763545 FN974-S Single Base Substitution A-C INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3505-S.SNP.4:27768898 chr04:027768898 0 W/27768898-27768898 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.994555;DP=2875;DP4=1531,1142,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74085e-05;MQSB=0.9684;RPB=0.604948;SGB=39.8925;VDB=0.607432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.4:27771480 chr04:027771480 0 W/27771480-27771480 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.588365;DP=3518;DP4=1829,1536,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70824e-05;MQSB=0.985921;RPB=0.273298;SGB=15.9981;VDB=0.31429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.4:27774200 chr04:027774200 0 W/27774200-27774200 FN2455 SNP C -> T AC=1;AN=200;BQB=0.982497;DP=3516;DP4=1892,1277,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000284414;MQB=4.48081e-06;MQSB=0.128631;RPB=0.308954;SGB=47.4799;VDB=0.0165314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.4:27776567 chr04:027776567 0 W/27776567-27776567 FN1708-S SNP A -> T AC=2;AN=188;BQB=0.609385;DP=2585;DP4=1142,1329,7,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.23334e-09;MQSB=0.902751;RPB=0.958564;SGB=36.2493;VDB=0.990936;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.4:27778745 chr04:027778745 0 W/27778745-27778745 FN944-S Single Base Substitution G-T INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN-37.SNP.4:27786593 chr04:027786593 0 W/27786593-27786593 FN-37 Single Base Substitution A-G INTRON Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN2349.SNP.4:27790568 chr04:027790568 0 W/27790568-27790568 FN2349 SNP G -> A AC=1;AN=192;BQB=0.524361;DP=4902;DP4=2181,2420,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.4331e-12;MQSB=0.818684;RPB=0.992369;SGB=68.2948;VDB=0.0630586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.4:27791301 chr04:027791301 0 W/27791301-27791301 FN1656-S Single Base Substitution A-G INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1586-S.SNP.4:27797511 chr04:027797511 0 W/27797511-27797511 FN1586-S Single Base Substitution A-T INTRON Homo SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2612-S.SNP.4:27800164 chr04:027800164 0 W/27800164-27800164 FN2612-S SNP G -> T AC=1;AN=198;BQB=0.998838;DP=3707;DP4=1457,2035,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42322e-11;MQSB=0.903491;RPB=0.198375;SGB=61.7198;VDB=0.049896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q2087K|2197|LOC_Os04g46894|protein_coding|CODING|LOC_Os04g46894.1|23|1) FN1656-S.SNP.4:27818116 chr04:027818116 0 W/27818116-27818116 FN1656-S Single Base Substitution A-C INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN437-S.SNP.4:27819988 chr04:027819988 0 W/27819988-27819988 FN437-S Single Base Substitution A-G INTRON HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN492-S.SNP.4:27822499 chr04:027822499 0 W/27822499-27822499 FN492-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2591-S.SNP.4:27826563 chr04:027826563 0 W/27826563-27826563 FN2591-S SNP T -> C AC=1;AN=198;BQB=0.748724;DP=3983;DP4=1691,2038,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.50745e-06;MQSB=0.767827;RPB=0.913732;SGB=44.9538;VDB=0.671437;EFF=UTR_5_PRIME(MODIFIER||407||339|LOC_Os04g46930|protein_coding|CODING|LOC_Os04g46930.1|1|1),UTR_5_PRIME(MODIFIER||407||339|LOC_Os04g46930|protein_coding|CODING|LOC_Os04g46930.2|1|1) FN3914-S.SNP.4:27829060 chr04:027829060 0 W/27829060-27829060 FN3914-S SNP C -> A AC=1;AN=158;BQB=0.923863;DP=2822;DP4=1405,1239,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.05009e-08;MQSB=0.6329;RPB=0.969864;SGB=40.8124;VDB=0.756485;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.4:27836982 chr04:027836982 0 W/27836982-27836982 FN1631-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2190-S.SNP.4:27838159 chr04:027838159 0 W/27838159-27838159 FN2190-S SNP C -> T AC=1;AN=190;BQB=0.606568;DP=4461;DP4=1800,2295,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.69142e-07;MQSB=0.955444;RPB=0.916386;SGB=23.6597;VDB=0.936522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.4:27839632 chr04:027839632 0 W/27839632-27839632 FN2177-S SNP T -> G AC=1;AN=168;BQB=0.996839;DP=3691;DP4=1984,1667,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.06268e-10;MQSB=0.989975;RPB=0.479561;SGB=11.3448;VDB=0.546778;EFF=INTRON(MODIFIER||||85|LOC_Os04g46960|protein_coding|CODING|LOC_Os04g46960.4|2|1),INTRON(MODIFIER||||197|LOC_Os04g46960|protein_coding|CODING|LOC_Os04g46960.1|2|1),INTRON(MODIFIER||||168|LOC_Os04g46960|protein_coding|CODING|LOC_Os04g46960.2|2|1),INTRON(MODIFIER||||167|LOC_Os04g46960|protein_coding|CODING|LOC_Os04g46960.3|2|1) FN3363-S.SNP.4:27842885 chr04:027842885 0 W/27842885-27842885 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.999234;DP=2919;DP4=1371,1463,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12239e-10;MQSB=0.98859;RPB=0.943981;SGB=71.3514;VDB=0.873398;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.4:27849749 chr04:027849749 0 W/27849749-27849749 FN4046-S SNP C -> T AC=1;AN=168;BQB=0.917649;DP=3282;DP4=1534,1600,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.24019e-08;MQSB=0.899916;RPB=0.984115;SGB=47.7421;VDB=0.503225;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E168|463|LOC_Os04g46980|protein_coding|CODING|LOC_Os04g46980.1|1|1) FN3811-S.SNP.4:27850049 chr04:027850049 0 W/27850049-27850049 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.575132;DP=2158;DP4=1042,1013,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.71973e-06;MQSB=2.96302e-05;RPB=0.941715;SGB=57.4238;VDB=0.707225;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F68|463|LOC_Os04g46980|protein_coding|CODING|LOC_Os04g46980.1|1|1) FN2618-S.SNP.4:27851512 chr04:027851512 0 W/27851512-27851512 FN2618-S SNP A -> G AC=1;AN=198;BQB=0.466673;DP=4374;DP4=2236,1943,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.45609e-11;MQSB=0.866555;RPB=0.756299;SGB=61.7198;VDB=0.662765;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.4:27854274 chr04:027854274 0 W/27854274-27854274 FN-328 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1023-S.SNP.4:27856888 chr04:027856888 0 W/27856888-27856888 FN1023-S Single Base Substitution G-A INTERGENIC HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2559-S.SNP.4:27857077 chr04:027857077 0 W/27857077-27857077 FN2559-S SNP G -> A AC=1;AN=198;BQB=0.736827;DP=4130;DP4=1865,2031,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.9891e-07;MQSB=0.996959;RPB=0.912844;SGB=40.3588;VDB=0.705725;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.4:27857503 chr04:027857503 0 W/27857503-27857503 FN438-S Single Base Substitution G-A INTERGENIC HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN513-S.SNP.4:27861517 chr04:027861517 0 W/27861517-27861517 FN513-S Single Base Substitution C-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1488-S.SNP.4:27866918 chr04:027866918 0 W/27866918-27866918 FN1488-S Single Base Substitution C-T INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1014-S.SNP.4:27871534 chr04:027871534 0 W/27871534-27871534 FN1014-S Single Base Substitution C-T INTRON HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN3803-S.SNP.4:27874561 chr04:027874561 0 W/27874561-27874561 FN3803-S SNP T -> C AC=1;AN=190;BQB=0.994409;DP=2854;DP4=1400,1278,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35634e-08;MQSB=0.941579;RPB=0.317031;SGB=67.3108;VDB=0.57722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.4:27874912 chr04:027874912 0 W/27874912-27874912 FN2403 SNP G -> A AC=1;AN=200;BQB=0.0131716;DP=4676;DP4=2327,2163,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.2354e-08;MQSB=0.996805;RPB=0.189384;SGB=68.0801;VDB=0.0710944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.4:27876224 chr04:027876224 0 W/27876224-27876224 FN3803-S SNP A -> T AC=1;AN=190;BQB=0.946484;DP=2290;DP4=1127,1084,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27604e-06;MQSB=0.00256748;RPB=0.524752;SGB=28.9929;VDB=0.0355294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.4:27876721 chr04:027876721 0 W/27876721-27876721 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.989671;DP=3847;DP4=1971,1652,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.88324e-10;MQSB=0.390401;RPB=0.73117;SGB=63.3342;VDB=0.0291098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.4:27876722 chr04:027876722 0 W/27876722-27876722 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.990386;DP=3836;DP4=1957,1613,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04758e-11;MQSB=0.422512;RPB=0.998327;SGB=12.5396;VDB=0.0548889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.4:27891391 chr04:027891391 0 W/27891391-27891391 FN-89 Single Base Substitution A-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN4083-S.SNP.4:27895162 chr04:027895162 0 W/27895162-27895162 FN4083-S SNP C -> T AC=1;AN=182;BQB=0.722919;DP=1931;DP4=672,1138,6,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.01229e-07;MQSB=0.390726;RPB=0.808159;SGB=46.1603;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.4:27895162 chr04:027895162 0 W/27895162-27895162 FN875-S Single Base Substitution C-T INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN932-S.SNP.4:27898804 chr04:027898804 0 W/27898804-27898804 FN932-S Single Base Substitution T-A INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN721-S.SNP.4:27899121 chr04:027899121 0 W/27899121-27899121 FN721-S Single Base Substitution C-A INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN4072-S.SNP.4:27899377 chr04:027899377 0 W/27899377-27899377 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.889785;DP=2519;DP4=1296,1102,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00119095;MQB=3.44034e-05;MQSB=0.386405;RPB=0.699335;SGB=30.5793;VDB=0.378188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.4:27899864 chr04:027899864 0 W/27899864-27899864 FN3853-S SNP C -> T AC=2;AN=158;BQB=0.970983;DP=2166;DP4=1213,841,10,15;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=1.5674e-07;MQSB=0.377206;RPB=0.967284;SGB=103.87;VDB=0.914889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.4:27901447 chr04:027901447 0 W/27901447-27901447 FN3105-S SNP G -> C AC=2;AN=184;BQB=0.859962;DP=2613;DP4=1355,1135,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.3384e-15;MQSB=0.98689;RPB=0.159294;SGB=103.004;VDB=0.17702;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.4:27918585 chr04:027918585 0 W/27918585-27918585 FN526-S Single Base Substitution G-A INTRON HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN511-S.SNP.4:27919304 chr04:027919304 0 W/27919304-27919304 FN511-S Single Base Substitution G-A INTRON HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-336.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN-336 Single Base Substitution A-T INTRON HOMO SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN-353.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN-353 Single Base Substitution A-T INTRON HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1237-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN1237-S Single Base Substitution A-T INTRON HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1638-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN1638-S Single Base Substitution A-T INTRON HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2709-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN2709-S SNP A -> T AC=2;AN=200;BQB=0.0211512;DP=4630;DP4=2120,2095,13,18;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00259179;MQB=1.67532e-10;MQSB=0.224995;RPB=0.675376;SGB=-112.043;VDB=0.615014;EFF=INTRON(MODIFIER||||315|LOC_Os04g47059|protein_coding|CODING|LOC_Os04g47059.1|6|1) FN4043-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN4043-S SNP A -> T AC=2;AN=168;BQB=0.978492;DP=2596;DP4=1286,1183,15,11;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0046225;MQB=1.36616e-07;MQSB=0.389505;RPB=0.229382;SGB=109.773;VDB=0.602445;EFF=INTRON(MODIFIER||||315|LOC_Os04g47059|protein_coding|CODING|LOC_Os04g47059.1|6|1) FN475-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN475-S Single Base Substitution A-T INTRON HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN793-S.SNP.4:27920078 chr04:027920078 0 W/27920078-27920078 FN793-S Single Base Substitution A-T INTRON HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1339-S.SNP.4:27920780 chr04:027920780 0 W/27920780-27920780 FN1339-S Single Base Substitution T-C INTRON HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2774-S.SNP.4:27921301 chr04:027921301 0 W/27921301-27921301 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.55034;DP=2993;DP4=1471,1379,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0130304;MQB=0.000164236;MQSB=6.47734e-26;RPB=0.721365;SGB=77.1196;VDB=0.525684;EFF=INTRON(MODIFIER||||315|LOC_Os04g47059|protein_coding|CODING|LOC_Os04g47059.1|6|1) FN2687-S.SNP.4:27923067 chr04:027923067 0 W/27923067-27923067 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.901224;DP=4632;DP4=2149,2246,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000215889;MQB=2.77027e-08;MQSB=0.799886;RPB=0.990702;SGB=26.8797;VDB=0.955313;EFF=INTRON(MODIFIER||||315|LOC_Os04g47059|protein_coding|CODING|LOC_Os04g47059.1|6|1) FN3525-S.SNP.4:27923467 chr04:027923467 0 W/27923467-27923467 FN3525-S SNP A -> G AC=1;AN=188;BQB=0.980654;DP=4183;DP4=1937,1961,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0109969;MQB=0.00036316;MQSB=0.143967;RPB=0.993799;SGB=-13.3699;VDB=0.180593;EFF=INTRON(MODIFIER||||315|LOC_Os04g47059|protein_coding|CODING|LOC_Os04g47059.1|6|1) FN1330-S.SNP.4:27939345 chr04:027939345 0 W/27939345-27939345 FN1330-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN731-S.SNP.4:27942325 chr04:027942325 0 W/27942325-27942325 FN731-S Single Base Substitution G-T INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2284.SNP.4:27945779 chr04:027945779 0 W/27945779-27945779 FN2284 SNP A -> T AC=1;AN=192;BQB=0.766551;DP=4596;DP4=2138,2154,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021758;MQB=5.64718e-12;MQSB=0.840274;RPB=0.978515;SGB=31.4783;VDB=0.0591071;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.4:27945780 chr04:027945780 0 W/27945780-27945780 FN2284 SNP T -> G AC=1;AN=192;BQB=0.914219;DP=4597;DP4=2125,2112,6,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000217533;MQB=2.50406e-11;MQSB=0.982368;RPB=0.968709;SGB=-11.9469;VDB=0.0350555;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.4:27945781 chr04:027945781 0 W/27945781-27945781 FN2284 SNP C -> T AC=1;AN=192;BQB=0.769848;DP=4596;DP4=2134,2217,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021758;MQB=4.07197e-13;MQSB=0.896048;RPB=0.71647;SGB=12.0478;VDB=0.0838167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.4:27951511 chr04:027951511 0 W/27951511-27951511 FN3371-S SNP T -> C AC=2;AN=184;BQB=0.740582;DP=2722;DP4=1078,1512,16,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.70993e-24;MQSB=0.990946;RPB=0.390607;SGB=170.831;VDB=0.652986;EFF=INTRON(MODIFIER||||574|LOC_Os04g47080|protein_coding|CODING|LOC_Os04g47080.1|8|1) FN2553-S.SNP.4:27953130 chr04:027953130 0 W/27953130-27953130 FN2553-S SNP A -> G AC=1;AN=198;BQB=0.758554;DP=4182;DP4=2035,1972,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000264561;MQSB=0.842095;RPB=0.609563;SGB=31.1689;VDB=0.283405;EFF=INTRON(MODIFIER||||574|LOC_Os04g47080|protein_coding|CODING|LOC_Os04g47080.1|5|1) FN2196-S.SNP.4:27954050 chr04:027954050 0 W/27954050-27954050 FN2196-S SNP G -> T AC=2;AN=190;BQB=0.877836;DP=3776;DP4=1695,1817,15,23;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.88007e-20;MQSB=0.000697244;RPB=0.426366;SGB=167.496;VDB=0.10562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L76M|574|LOC_Os04g47080|protein_coding|CODING|LOC_Os04g47080.1|5|1) FN2196-S.SNP.4:27954051 chr04:027954051 0 W/27954051-27954051 FN2196-S SNP C -> T AC=2;AN=190;BQB=0.916345;DP=3787;DP4=1744,1820,15,23;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=3.78248e-21;MQSB=0.000362751;RPB=0.618827;SGB=124.947;VDB=0.104444;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q75|574|LOC_Os04g47080|protein_coding|CODING|LOC_Os04g47080.1|5|1) FN2791-S.SNP.4:27956731 chr04:027956731 0 W/27956731-27956731 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.4956;DP=4385;DP4=2374,1842,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.7669e-09;MQSB=0.861111;RPB=0.693755;SGB=31.9395;VDB=0.952332;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.4:27961550 chr04:027961550 0 W/27961550-27961550 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.796563;DP=3991;DP4=1842,1956,6,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.71387e-08;MQSB=0.280222;RPB=0.758121;SGB=47.4799;VDB=0.39289;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A207V|212|LOC_Os04g47090|protein_coding|CODING|LOC_Os04g47090.1|2|1) FN3802-S.SNP.4:27968901 chr04:027968901 0 W/27968901-27968901 FN3802-S SNP G -> T AC=1;AN=190;BQB=0.758424;DP=3243;DP4=1820,1337,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.035461;MQB=0.781328;MQSB=0;RPB=0.990604;SGB=36.1006;VDB=0.97972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C894F|1851|LOC_Os04g47100|protein_coding|CODING|LOC_Os04g47100.1|2|1) FN3921-S.SNP.4:27976936 chr04:027976936 0 W/27976936-27976936 FN3921-S SNP C -> T AC=1;AN=158;BQB=0.995202;DP=2454;DP4=950,1401,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=5.65775e-10;MQSB=0.335648;RPB=0.979087;SGB=68.9144;VDB=0.606363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.4:27976937 chr04:027976937 0 W/27976937-27976937 FN3921-S SNP A -> T AC=1;AN=158;BQB=0.502271;DP=2461;DP4=928,1387,7,14;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=8.084e-11;MQSB=0.35476;RPB=0.886341;SGB=10.3028;VDB=0.714641;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.4:27980307 chr04:027980307 0 W/27980307-27980307 FN946-S Single Base Substitution C-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN885-S.SNP.4:27998582 chr04:027998582 0 W/27998582-27998582 FN885-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g47150 OsSub43 - Putative Subtilisin homologue, expressed SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN1545-S.SNP.4:28000604 chr04:028000604 0 W/28000604-28000604 FN1545-S Single Base Substitution T-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN3294-S.SNP.4:28001378 chr04:028001378 0 W/28001378-28001378 FN3294-S SNP T -> C AC=1;AN=184;BQB=0.975509;DP=3464;DP4=1352,1964,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60439e-10;MQSB=0.762422;RPB=0.298129;SGB=75.8731;VDB=0.166927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.4:28006455 chr04:028006455 0 W/28006455-28006455 FN3993-S SNP A -> T AC=1;AN=168;BQB=0.5376;DP=2833;DP4=1369,1099,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=3.88283e-05;MQSB=0.0290316;RPB=0.68712;SGB=27.8864;VDB=0.54266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.4:28013124 chr04:028013124 0 W/28013124-28013124 FN1096-S Single Base Substitution G-A INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3437-S.SNP.4:28018282 chr04:028018282 0 W/28018282-28018282 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.989878;DP=2416;DP4=1260,1095,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.43046e-09;MQSB=0.999381;RPB=0.83489;SGB=57.786;VDB=0.0711402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G344D|864|LOC_Os04g47180|protein_coding|CODING|LOC_Os04g47180.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G344D|714|LOC_Os04g47180|protein_coding|CODING|LOC_Os04g47180.2|4|1) FN3572-S.SNP.4:28018721 chr04:028018721 0 W/28018721-28018721 FN3572-S SNP C -> T AC=2;AN=188;BQB=0.781711;DP=2564;DP4=1243,1258,13,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06607e-11;MQSB=0.997039;RPB=0.917971;SGB=67.8739;VDB=0.370006;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G198R|864|LOC_Os04g47180|protein_coding|CODING|LOC_Os04g47180.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G198R|714|LOC_Os04g47180|protein_coding|CODING|LOC_Os04g47180.2|4|1) FN2584-S.SNP.4:28026251 chr04:028026251 0 W/28026251-28026251 FN2584-S SNP A -> G AC=1;AN=198;BQB=0.605776;DP=4193;DP4=1802,2175,7,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238493;MQB=5.15648e-14;MQSB=1;RPB=0.651488;SGB=18.9201;VDB=0.831773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.4:28026878 chr04:028026878 0 W/28026878-28026878 FN2591-S SNP T -> A AC=1;AN=198;BQB=0.375517;DP=4237;DP4=2254,1784,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.98324e-06;MQSB=0.930533;RPB=0.341365;SGB=35.7638;VDB=0.605799;EFF=UTR_3_PRIME(MODIFIER||62||410|LOC_Os04g47190|protein_coding|CODING|LOC_Os04g47190.2|10|1),INTRON(MODIFIER||||410|LOC_Os04g47190|protein_coding|CODING|LOC_Os04g47190.1|10|1) FN1652-S.SNP.4:28032461 chr04:028032461 0 W/28032461-28032461 FN1652-S Single Base Substitution G-A INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN796-S.SNP.4:28034425 chr04:028034425 0 W/28034425-28034425 FN796-S Single Base Substitution C-A INTRON HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN860-S.SNP.4:28036085 chr04:028036085 0 W/28036085-28036085 FN860-S Single Base Substitution G-A INTERGENIC HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN-268.SNP.4:28045643 chr04:028045643 0 W/28045643-28045643 FN-268 Single Base Substitution A-C INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN873-S.SNP.4:28053997 chr04:028053997 0 W/28053997-28053997 FN873-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g47240 STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-192.SNP.4:28054179 chr04:028054179 0 W/28054179-28054179 FN-192 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g47240 STE_MEKK_ste11_MAP3K.17 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN-163.SNP.4:28057266 chr04:028057266 0 W/28057266-28057266 FN-163 Single Base Substitution A-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN3748-S.SNP.4:28058781 chr04:028058781 0 W/28058781-28058781 FN3748-S SNP C -> T AC=1;AN=190;BQB=0.967331;DP=2711;DP4=1415,1193,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53179e-08;MQSB=0.88534;RPB=0.968332;SGB=53.6492;VDB=0.14446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.4:28059764 chr04:028059764 0 W/28059764-28059764 FN1193-S Single Base Substitution G-A INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN759-S.SNP.4:28064730 chr04:028064730 0 W/28064730-28064730 FN759-S Single Base Substitution C-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN-387.SNP.4:28067131 chr04:028067131 0 W/28067131-28067131 FN-387 Single Base Substitution A-G UTR_3_PRIME HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2444.SNP.4:28067613 chr04:028067613 0 W/28067613-28067613 FN2444 SNP T -> A AC=1;AN=200;BQB=0.992572;DP=4778;DP4=2399,2077,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.32608e-17;MQSB=0.585604;RPB=0.43976;SGB=60.747;VDB=0.355915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N791Y|811|LOC_Os04g47270|protein_coding|CODING|LOC_Os04g47270.1|2|1) FN807-S.SNP.4:28070076 chr04:028070076 0 W/28070076-28070076 FN807-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3626-S.SNP.4:28082084 chr04:028082084 0 W/28082084-28082084 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.412277;DP=2185;DP4=1154,918,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0252288;MQSB=0.250009;RPB=0.559029;SGB=30.8803;VDB=0.987171;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P55|533|LOC_Os04g47300|protein_coding|CODING|LOC_Os04g47300.1|1|1) FN4344-S.SNP.4:28083105 chr04:028083105 0 W/28083105-28083105 FN4344-S SNP T -> G AC=1;AN=170;BQB=0.924398;DP=2693;DP4=1340,1236,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.08378e-07;MQSB=0.80686;RPB=0.669821;SGB=14.9986;VDB=0.38912;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.4:28083106 chr04:028083106 0 W/28083106-28083106 FN4344-S SNP A -> T AC=1;AN=170;BQB=0.840952;DP=2676;DP4=1289,1272,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.12445e-07;MQSB=0.856054;RPB=0.998908;SGB=38.987;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.4:28083107 chr04:028083107 0 W/28083107-28083107 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.992957;DP=2671;DP4=1329,1273,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.2382e-07;MQSB=0.805977;RPB=0.999153;SGB=38.987;VDB=0.244344;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.4:28089926 chr04:028089926 0 W/28089926-28089926 FN1536-S Single Base Substitution T-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN936-S.SNP.4:28111223 chr04:028111223 0 W/28111223-28111223 FN936-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2711-S.SNP.4:28125709 chr04:028125709 0 W/28125709-28125709 FN2711-S SNP T -> G AC=1;AN=200;BQB=0.745614;DP=5061;DP4=2451,2363,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.43596e-11;MQSB=0.987202;RPB=0.461097;SGB=58.2954;VDB=0.615287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:28134212 chr04:028134212 0 W/28134212-28134212 FN1557-S Single Base Substitution T-G INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN4314-S.SNP.4:28134601 chr04:028134601 0 W/28134601-28134601 FN4314-S SNP A -> T AC=1;AN=170;BQB=0.946053;DP=2375;DP4=1153,1171,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.53016e-07;MQSB=0.998988;RPB=0.528989;SGB=34.878;VDB=0.704797;EFF=INTRON(MODIFIER||||347|LOC_Os04g47410|protein_coding|CODING|LOC_Os04g47410.1|7|1),INTRON(MODIFIER||||339|LOC_Os04g47410|protein_coding|CODING|LOC_Os04g47410.3|7|1),INTRON(MODIFIER||||339|LOC_Os04g47410|protein_coding|CODING|LOC_Os04g47410.4|7|1),INTRON(MODIFIER||||339|LOC_Os04g47410|protein_coding|CODING|LOC_Os04g47410.5|7|1) FN3505-S.SNP.4:28149693 chr04:028149693 0 W/28149693-28149693 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.425135;DP=3386;DP4=1435,1889,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3938e-05;MQSB=0.999092;RPB=0.661494;SGB=13.3597;VDB=0.790654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.4:28151187 chr04:028151187 0 W/28151187-28151187 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.984939;DP=4951;DP4=2046,2660,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.19516e-19;MQSB=0.995495;RPB=0.0477799;SGB=68.5625;VDB=0.334343;EFF=INTERGENIC(MODIFIER||||||||||1) FN-381.SNP.4:28160485 chr04:028160485 0 W/28160485-28160485 FN-381 Single Base Substitution T-A INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN-381.SNP.4:28160486 chr04:028160486 0 W/28160486-28160486 FN-381 Single Base Substitution T-A INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3626-S.SNP.4:28163666 chr04:028163666 0 W/28163666-28163666 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.872177;DP=3276;DP4=1545,1616,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20032e-07;MQSB=0.987694;RPB=0.787426;SGB=62.7569;VDB=0.465739;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.4:28164503 chr04:028164503 0 W/28164503-28164503 FN-342 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g47460 hypothetical protein SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2128-S.SNP.4:28183337 chr04:028183337 0 W/28183337-28183337 FN2128-S SNP A -> T AC=1;AN=168;BQB=0.00420651;DP=4104;DP4=2077,1979,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04676e-11;MQSB=0.937383;RPB=0.979273;SGB=-45.1967;VDB=0.125424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H234Q|570|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H234Q|570|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H214Q|420|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.3|5|1),SPLICE_SITE_REGION(LOW||||570|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.1|6|1),SPLICE_SITE_REGION(LOW||||570|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.2|6|1),SPLICE_SITE_REGION(LOW||||420|LOC_Os04g47520|protein_coding|CODING|LOC_Os04g47520.3|5|1) FN-301.SNP.4:28189761 chr04:028189761 0 W/28189761-28189761 FN-301 Single Base Substitution G-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN758-S.SNP.4:28191768 chr04:028191768 0 W/28191768-28191768 FN758-S Single Base Substitution A-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2735-S.SNP.4:28193306 chr04:028193306 0 W/28193306-28193306 FN2735-S SNP C -> A AC=2;AN=200;BQB=0.803528;DP=4799;DP4=2168,2379,31,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.93728e-29;MQSB=0.886044;RPB=0.489747;SGB=118.061;VDB=0.763206;EFF=INTRON(MODIFIER||||372|LOC_Os04g47530|protein_coding|CODING|LOC_Os04g47530.1|5|1) FN-162.SNP.4:28199773 chr04:028199773 0 W/28199773-28199773 FN-162 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g47550 expressed protein SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-162.SNP.4:28199774 chr04:028199774 0 W/28199774-28199774 FN-162 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g47550 expressed protein SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN4106-S.SNP.4:28207813 chr04:028207813 0 W/28207813-28207813 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.922722;DP=3337;DP4=1770,1488,12,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.83143e-09;MQSB=0.982757;RPB=0.682404;SGB=75.6874;VDB=0.114564;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S715L|1636|LOC_Os04g47560|protein_coding|CODING|LOC_Os04g47560.1|3|1) FN985-S.SNP.4:28209543 chr04:028209543 0 W/28209543-28209543 FN985-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g47560 retrotransposon protein, putative, unclassified, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2749-S.SNP.4:28222363 chr04:028222363 0 W/28222363-28222363 FN2749-S SNP A -> G AC=1;AN=200;BQB=0.876097;DP=4259;DP4=1923,2095,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32406e-07;MQSB=0.257102;RPB=0.789972;SGB=33.0593;VDB=0.485758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.4:28223352 chr04:028223352 0 W/28223352-28223352 FN3714-S SNP A -> G AC=1;AN=190;BQB=0.882831;DP=2624;DP4=1467,1078,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.3149e-10;MQSB=0.999289;RPB=0.652093;SGB=62.7569;VDB=0.461944;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.4:28227828 chr04:028227828 0 W/28227828-28227828 FN-95 Single Base Substitution A-T INTRON HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3789-S.SNP.4:28230201 chr04:028230201 0 W/28230201-28230201 FN3789-S SNP G -> A AC=2;AN=190;BQB=0.997564;DP=2071;DP4=1243,715,11,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.10569e-08;MQSB=0.937194;RPB=0.269986;SGB=62.7569;VDB=0.903899;EFF=INTRON(MODIFIER||||1172|LOC_Os04g47590|protein_coding|CODING|LOC_Os04g47590.1|22|1) FN2146-S.SNP.4:28252042 chr04:028252042 0 W/28252042-28252042 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.119229;DP=3520;DP4=1809,1674,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.00134052;MQSB=0.705292;RPB=0.420955;SGB=-95.493;VDB=0.32674;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.4:28257061 chr04:028257061 0 W/28257061-28257061 FN1711-S SNP T -> A AC=1;AN=188;BQB=0.0383112;DP=2775;DP4=1136,1585,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00108108;MQB=0.000120817;MQSB=0.25661;RPB=0.837747;SGB=7.0815;VDB=0.315431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.4:28257170 chr04:028257170 0 W/28257170-28257170 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.980648;DP=4862;DP4=1940,2646,20,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.53659e-21;MQSB=0.410265;RPB=0.9293;SGB=137.609;VDB=0.624269;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.4:28261886 chr04:028261886 0 W/28261886-28261886 FN1438-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1438-S.SNP.4:28261910 chr04:028261910 0 W/28261910-28261910 FN1438-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3927-S.SNP.4:28271025 chr04:028271025 0 W/28271025-28271025 FN3927-S SNP C -> A AC=1;AN=158;BQB=0.98877;DP=2349;DP4=1296,944,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.98419e-12;MQSB=0.90552;RPB=0.651896;SGB=77.6532;VDB=0.0784114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.4:28271304 chr04:028271304 0 W/28271304-28271304 FN2697-S SNP T -> A AC=2;AN=200;BQB=0.951379;DP=5638;DP4=2749,2710,15,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.74856e-24;MQSB=0.935375;RPB=0.830239;SGB=4.4397;VDB=0.856298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.4:28273482 chr04:028273482 0 W/28273482-28273482 FN1029-S Single Base Substitution T-A INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1029-S.SNP.4:28273483 chr04:028273483 0 W/28273483-28273483 FN1029-S Single Base Substitution A-G INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN945-S.SNP.4:28273530 chr04:028273530 0 W/28273530-28273530 FN945-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g47640 RWP-RK domain-containing protein, putative, expressed SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN945-S.SNP.4:28273531 chr04:028273531 0 W/28273531-28273531 FN945-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2614-S.SNP.4:28275277 chr04:028275277 0 W/28275277-28275277 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.978795;DP=4091;DP4=2090,1801,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.37881e-07;MQSB=0.920054;RPB=0.800115;SGB=36.5539;VDB=0.125181;EFF=INTRON(MODIFIER||||339|LOC_Os04g47640|protein_coding|CODING|LOC_Os04g47640.1|2|1) FN2734-S.SNP.4:28285594 chr04:028285594 0 W/28285594-28285594 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.821754;DP=4911;DP4=2584,2079,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.02584e-14;MQSB=0.410943;RPB=0.997062;SGB=45.1159;VDB=0.902775;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.4:28297502 chr04:028297502 0 W/28297502-28297502 FN427-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1540-S.SNP.4:28299450 chr04:028299450 0 W/28299450-28299450 FN1540-S Single Base Substitution C-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2247-S.SNP.4:28309552 chr04:028309552 0 W/28309552-28309552 FN2247-S SNP G -> T AC=1;AN=190;BQB=0.702514;DP=4135;DP4=1839,1994,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0255e-07;MQSB=0.322038;RPB=0.849997;SGB=49.0954;VDB=0.674631;EFF=INTRON(MODIFIER||||708|LOC_Os04g47710|protein_coding|CODING|LOC_Os04g47710.1|1|1) FN1133-S.SNP.4:28309970 chr04:028309970 0 W/28309970-28309970 FN1133-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g47710 retrotransposon protein, putative, unclassified, expressed SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2096-S.SNP.4:28313879 chr04:028313879 0 W/28313879-28313879 FN2096-S SNP G -> C AC=1;AN=168;BQB=0.0245914;DP=3128;DP4=1459,1617,13,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.88385e-09;MQSB=0.565605;RPB=0.744305;SGB=-182.327;VDB=0.311975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.4:28314016 chr04:028314016 0 W/28314016-28314016 FN1156-XA21 Single Base Substitution T-C INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1467-S.SNP.4:28317851 chr04:028317851 0 W/28317851-28317851 FN1467-S Single Base Substitution C-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2550-S.SNP.4:28319034 chr04:028319034 0 W/28319034-28319034 FN2550-S SNP G -> T AC=1;AN=198;BQB=0.22031;DP=6135;DP4=2569,3273,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0735126;MQB=0.160739;MQSB=0.00898051;RPB=0.995543;SGB=-35.021;VDB=0.706638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.4:28319035 chr04:028319035 0 W/28319035-28319035 FN2550-S SNP A -> T AC=1;AN=198;BQB=0.862045;DP=6128;DP4=2491,3106,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0709856;MQB=0.238001;MQSB=0.753168;RPB=0.957711;SGB=29.3637;VDB=0.299352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.4:28320812 chr04:028320812 0 W/28320812-28320812 FN3479-S SNP G -> A AC=2;AN=184;BQB=0.999736;DP=3642;DP4=1757,1791,17,18;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0208677;MQB=1.20311e-10;MQSB=0.0544376;RPB=0.644081;SGB=152.744;VDB=0.951383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E465K|767|LOC_Os04g47730|protein_coding|CODING|LOC_Os04g47730.1|3|1) FN448-S.SNP.4:28330131 chr04:028330131 0 W/28330131-28330131 FN448-S Single Base Substitution G-T INTERGENIC HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3598-S.SNP.4:28330300 chr04:028330300 0 W/28330300-28330300 FN3598-S SNP G -> A AC=2;AN=188;BQB=0.955843;DP=2901;DP4=1200,1594,12,11;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0196484;MQB=2.98655e-08;MQSB=8.9569e-07;RPB=0.990063;SGB=98.9552;VDB=0.28667;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.4:28344638 chr04:028344638 0 W/28344638-28344638 FN4149-S SNP A -> G AC=1;AN=170;BQB=0.558767;DP=2672;DP4=1197,1370,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.6723e-06;MQSB=0.976877;RPB=0.951028;SGB=0.00451649;VDB=0.8476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.4:28355787 chr04:028355787 0 W/28355787-28355787 FN2151-S SNP T -> C AC=1;AN=168;BQB=0.0849067;DP=2279;DP4=1425,801,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00041419;MQSB=0.985972;RPB=0.783186;SGB=12.4615;VDB=0.662696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1032-S.SNP.4:28357444 chr04:028357444 0 W/28357444-28357444 FN1032-S Single Base Substitution C-T INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2680-S.SNP.4:28357726 chr04:028357726 0 W/28357726-28357726 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.0985684;DP=4652;DP4=2592,1837,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73927e-09;MQSB=0.571392;RPB=0.795105;SGB=7.88476;VDB=0.91455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.4:28363279 chr04:028363279 0 W/28363279-28363279 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.600478;DP=3448;DP4=1741,1620,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.0785963;MQB=0.987679;MQSB=3.11856e-21;RPB=0.933301;SGB=18.2315;VDB=0.254138;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1131*|1512|LOC_Os04g47800|protein_coding|CODING|LOC_Os04g47800.1|6|1);LOF=(LOC_Os04g47800|LOC_Os04g47800|1|1.00);NMD=(LOC_Os04g47800|LOC_Os04g47800|1|1.00) FN3861-S.SNP.4:28365188 chr04:028365188 0 W/28365188-28365188 FN3861-S SNP T -> C AC=1;AN=158;BQB=0.93384;DP=2681;DP4=1142,1423,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.0913838;MQB=0.58438;MQSB=0.021988;RPB=0.956474;SGB=33.9591;VDB=0.0538244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.4:28377393 chr04:028377393 0 W/28377393-28377393 FN2560-S SNP A -> G AC=2;AN=198;BQB=0.0962779;DP=4461;DP4=2199,1983,7,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.97218e-09;MQSB=0.99774;RPB=0.895102;SGB=26.7492;VDB=0.68766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.4:28377544 chr04:028377544 0 W/28377544-28377544 FN2165-S SNP A -> G AC=2;AN=168;BQB=0.748027;DP=3684;DP4=1919,1718,20,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.68822e-15;MQSB=0.976228;RPB=0.827197;SGB=-88.4675;VDB=0.211397;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.4:28379206 chr04:028379206 0 W/28379206-28379206 FN3750-S SNP C -> G AC=1;AN=190;BQB=0.931809;DP=2752;DP4=1194,1452,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.66442e-10;MQSB=0.797041;RPB=0.962929;SGB=46.7622;VDB=0.138479;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.4:28383839 chr04:028383839 0 W/28383839-28383839 FN_955-1 Single Base Substitution C-A HET LOC_Os04g47830 SNF2 family N-terminal domain containing protein, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2177-S.SNP.4:28384018 chr04:028384018 0 W/28384018-28384018 FN2177-S SNP A -> G AC=1;AN=168;BQB=0.0241923;DP=4275;DP4=1943,2288,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58949e-05;MQSB=0.985926;RPB=0.296393;SGB=-64.9298;VDB=0.649444;EFF=INTRON(MODIFIER||||881|LOC_Os04g47830|protein_coding|CODING|LOC_Os04g47830.1|8|1) FN551-S.SNP.4:28391803 chr04:028391803 0 W/28391803-28391803 FN551-S Single Base Substitution A-T INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN-314.SNP.4:28397743 chr04:028397743 0 W/28397743-28397743 FN-314 Single Base Substitution G-A INTERGENIC HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-314.SNP.4:28397744 chr04:028397744 0 W/28397744-28397744 FN-314 Single Base Substitution G-C INTERGENIC HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-68.SNP.4:28410166 chr04:028410166 0 W/28410166-28410166 FN-68 Single Base Substitution T-C INTRON HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3388-S.SNP.4:28417847 chr04:028417847 0 W/28417847-28417847 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.98991;DP=2475;DP4=1174,1229,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.02262e-06;MQSB=0.944693;RPB=0.822051;SGB=35.1773;VDB=0.386322;EFF=INTERGENIC(MODIFIER||||||||||1) 701-6.SNP.4:28417998 chr04:028417998 0 W/28417998-28417998 701-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN973-S.SNP.4:28419171 chr04:028419171 0 W/28419171-28419171 FN973-S Single Base Substitution T-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN870-S.SNP.4:28420891 chr04:028420891 0 W/28420891-28420891 FN870-S Single Base Substitution G-A INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3650-S.SNP.4:28426728 chr04:028426728 0 W/28426728-28426728 FN3650-S SNP G -> A AC=1;AN=190;BQB=0.886845;DP=3457;DP4=1667,1649,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53464e-11;MQSB=0.994172;RPB=0.181075;SGB=80.9724;VDB=0.0847085;EFF=UTR_3_PRIME(MODIFIER||103||1101|LOC_Os04g47870|protein_coding|CODING|LOC_Os04g47870.2|23|1),UTR_3_PRIME(MODIFIER||103||1118|LOC_Os04g47870|protein_coding|CODING|LOC_Os04g47870.1|23|1) FN622-S.SNP.4:28430457 chr04:028430457 0 W/28430457-28430457 FN622-S Single Base Substitution T-A INTRON HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2419.SNP.4:28436267 chr04:028436267 0 W/28436267-28436267 FN2419 SNP T -> C AC=1;AN=200;BQB=0.945309;DP=4364;DP4=1691,2053,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.17529e-11;MQSB=1.3378e-05;RPB=0.630245;SGB=-38.869;VDB=0.122571;EFF=INTRON(MODIFIER||||1118|LOC_Os04g47870|protein_coding|CODING|LOC_Os04g47870.1|1|1) FN662-S.SNP.4:28442261 chr04:028442261 0 W/28442261-28442261 FN662-S Single Base Substitution C-T INTERGENIC HOMO SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN2218-S.SNP.4:28445423 chr04:028445423 0 W/28445423-28445423 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.144114;DP=4759;DP4=2038,2264,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.95126e-16;MQSB=0.809181;RPB=0.210499;SGB=-113.221;VDB=0.561197;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.4:28456056 chr04:028456056 0 W/28456056-28456056 FN-199 Single Base Substitution T-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3287-S.SNP.4:28456327 chr04:028456327 0 W/28456327-28456327 FN3287-S SNP A -> C AC=1;AN=184;BQB=0.626279;DP=2627;DP4=1289,1221,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.43635e-07;MQSB=0.993257;RPB=0.425944;SGB=3.75875;VDB=0.76757;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.4:28458410 chr04:028458410 0 W/28458410-28458410 FN_N1-26-1 Single Base Substitution C-T HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN4020-S.SNP.4:28461033 chr04:028461033 0 W/28461033-28461033 FN4020-S SNP G -> A AC=2;AN=168;BQB=0.548406;DP=1929;DP4=937,912,9,8;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0;MQB=0.241397;MQSB=0.211979;RPB=0.335913;SGB=69.8961;VDB=0.776791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.4:28465448 chr04:028465448 0 W/28465448-28465448 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.795501;DP=2383;DP4=1124,1157,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=7.44546e-09;MQSB=0.276306;RPB=0.894831;SGB=78.7577;VDB=0.358005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.4:28475588 chr04:028475588 0 W/28475588-28475588 FN-316 Single Base Substitution G-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3520-S.SNP.4:28476343 chr04:028476343 0 W/28476343-28476343 FN3520-S SNP C -> T AC=1;AN=188;BQB=0.485754;DP=2647;DP4=1292,1311,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77153e-07;MQSB=0.989024;RPB=0.923769;SGB=43.0708;VDB=0.217394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.4:28483592 chr04:028483592 0 W/28483592-28483592 FN1379-S Single Base Substitution C-T INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-207.SNP.4:28485687 chr04:028485687 0 W/28485687-28485687 FN-207 Single Base Substitution T-C INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2435.SNP.4:28491706 chr04:028491706 0 W/28491706-28491706 FN2435 SNP T -> A AC=1;AN=200;BQB=0.738532;DP=4496;DP4=2050,2029,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16334e-09;MQSB=0.992108;RPB=0.430494;SGB=-11.8999;VDB=0.679639;EFF=INTRON(MODIFIER||||349|LOC_Os04g47912|protein_coding|CODING|LOC_Os04g47912.1|2|1),INTRON(MODIFIER||||349|LOC_Os04g47912|protein_coding|CODING|LOC_Os04g47912.2|2|1) FN3561-S.SNP.4:28498661 chr04:028498661 0 W/28498661-28498661 FN3561-S SNP C -> T AC=2;AN=188;BQB=0.975064;DP=3144;DP4=1476,1566,15,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.99764e-16;MQSB=0.808696;RPB=0.798027;SGB=106.85;VDB=0.774108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.4:28507642 chr04:028507642 0 W/28507642-28507642 FN-206 Single Base Substitution G-A INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2311.SNP.4:28510946 chr04:028510946 0 W/28510946-28510946 FN2311 SNP C -> A AC=1;AN=192;BQB=0.648158;DP=4803;DP4=2225,2290,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.1435e-11;MQSB=0.838299;RPB=0.728174;SGB=16.7409;VDB=0.16318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.4:28511350 chr04:028511350 0 W/28511350-28511350 FN3723-S SNP A -> C AC=1;AN=190;BQB=0.432149;DP=2853;DP4=1363,1312,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00503604;MQSB=0.529821;RPB=0.4981;SGB=30.8803;VDB=0.201783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.4:28517719 chr04:028517719 0 W/28517719-28517719 FN-165 Single Base Substitution G-C INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN1121-S.SNP.4:28523963 chr04:028523963 0 W/28523963-28523963 FN1121-S Single Base Substitution C-A INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.4:28523968 chr04:028523968 0 W/28523968-28523968 FN1121-S Single Base Substitution T-A INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN458-S.SNP.4:28524480 chr04:028524480 0 W/28524480-28524480 FN458-S Single Base Substitution G-T INTRON HOMO SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN480-S.SNP.4:28532246 chr04:028532246 0 W/28532246-28532246 FN480-S Single Base Substitution G-T INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN480-S.SNP.4:28532247 chr04:028532247 0 W/28532247-28532247 FN480-S Single Base Substitution C-T INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN745-S.SNP.4:28536460 chr04:028536460 0 W/28536460-28536460 FN745-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN737-S.SNP.4:28543675 chr04:028543675 0 W/28543675-28543675 FN737-S Single Base Substitution C-T INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN2673-S.SNP.4:28545761 chr04:028545761 0 W/28545761-28545761 FN2673-S SNP A -> T AC=1;AN=200;BQB=0.997749;DP=5238;DP4=2334,2664,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.48754e-08;MQSB=0.787522;RPB=0.603395;SGB=58.8698;VDB=0.812925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.4:28550098 chr04:028550098 0 W/28550098-28550098 FN1525-S Single Base Substitution A-T INTERGENIC Homo SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2691-S.SNP.4:28550098 chr04:028550098 0 W/28550098-28550098 FN2691-S SNP A -> T AC=1;AN=200;BQB=0.963579;DP=4698;DP4=1869,1952,17,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=3.2672e-10;MQSB=0.234715;RPB=0.632169;SGB=-4.63785;VDB=0.0953835;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.4:28550098 chr04:028550098 0 W/28550098-28550098 FN865-S Single Base Substitution A-T INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2374.SNP.4:28551312 chr04:028551312 0 W/28551312-28551312 FN2374 SNP C -> T AC=1;AN=192;BQB=0.0249006;DP=3927;DP4=1879,1554,10,3;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000254647;MQB=0.000310633;MQSB=0.146554;RPB=0.302999;SGB=18.6565;VDB=0.45262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.4:28552245 chr04:028552245 0 W/28552245-28552245 FN1313-S Single Base Substitution G-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN705-S.SNP.4:28552887 chr04:028552887 0 W/28552887-28552887 FN705-S Single Base Substitution G-A INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN622-S.SNP.4:28569286 chr04:028569286 0 W/28569286-28569286 FN622-S Single Base Substitution G-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2754-S.SNP.4:28570230 chr04:028570230 0 W/28570230-28570230 FN2754-S SNP G -> T AC=2;AN=200;BQB=0.869387;DP=5018;DP4=2354,2366,25,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.11423e-28;MQSB=0.836578;RPB=0.973122;SGB=152.03;VDB=0.0479325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.4:28570231 chr04:028570231 0 W/28570231-28570231 FN2754-S SNP T -> A AC=2;AN=200;BQB=0.774668;DP=5020;DP4=2381,2349,26,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.13469e-28;MQSB=0.877745;RPB=0.904711;SGB=105.035;VDB=0.0701068;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.4:28580209 chr04:028580209 0 W/28580209-28580209 FN764-S Single Base Substitution G-A INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1582-S.SNP.4:28592517 chr04:028592517 0 W/28592517-28592517 FN1582-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g48050 RING zinc finger protein, putative, expressed SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1000-S.SNP.4:28595764 chr04:028595764 0 W/28595764-28595764 FN1000-S Single Base Substitution T-C INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN4021-S.SNP.4:28602913 chr04:028602913 0 W/28602913-28602913 FN4021-S SNP G -> T AC=1;AN=168;BQB=0.996942;DP=3262;DP4=1511,1635,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.79671e-10;MQSB=0.993316;RPB=0.940326;SGB=41.6096;VDB=0.907907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P576T|701|LOC_Os04g48070|protein_coding|CODING|LOC_Os04g48070.3|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P576T|813|LOC_Os04g48070|protein_coding|CODING|LOC_Os04g48070.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P569T|806|LOC_Os04g48070|protein_coding|CODING|LOC_Os04g48070.2|8|1) FN2108-S.SNP.4:28614424 chr04:028614424 0 W/28614424-28614424 FN2108-S SNP C -> T AC=1;AN=168;BQB=0.843702;DP=2322;DP4=1089,1210,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00990525;MQB=0.000986495;MQSB=1.29326e-16;RPB=0.890838;SGB=38.8805;VDB=0.769035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.4:28615277 chr04:028615277 0 W/28615277-28615277 FN2547-S SNP G -> A AC=2;AN=198;BQB=0.425542;DP=4178;DP4=1913,2024,13,4;HOB=0.019998;ICB=0.495001;MQ=31;MQ0F=0.108904;MQB=0.214872;MQSB=7.89521e-33;RPB=0.453373;SGB=29.3443;VDB=0.318289;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.4:28615737 chr04:028615737 0 W/28615737-28615737 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.773175;DP=3508;DP4=2063,1299,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=27;MQ0F=0.207811;MQB=0.281603;MQSB=6.42295e-15;RPB=0.223127;SGB=38.987;VDB=0.882989;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.4:28618440 chr04:028618440 0 W/28618440-28618440 FN2539-S SNP G -> A AC=1;AN=198;BQB=0.352182;DP=3870;DP4=2010,1642,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0478036;MQB=6.50611e-05;MQSB=0.417026;RPB=0.42472;SGB=67.9293;VDB=0.641471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G855S|1043|LOC_Os04g48080|protein_coding|CODING|LOC_Os04g48080.1|2|1) FN2539-S.SNP.4:28618441 chr04:028618441 0 W/28618441-28618441 FN2539-S SNP G -> A AC=1;AN=198;BQB=0.360021;DP=3861;DP4=1922,1637,91,9;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.048433;MQB=0;MQSB=0.422435;RPB=6.24778e-13;SGB=-1504.54;VDB=1.97323e-11;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G855D|1043|LOC_Os04g48080|protein_coding|CODING|LOC_Os04g48080.1|2|1) FN2719-S.SNP.4:28627310 chr04:028627310 0 W/28627310-28627310 FN2719-S SNP C -> T AC=1;AN=200;BQB=0.196488;DP=4547;DP4=2549,1706,12,16;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.076534;MQB=0.805006;MQSB=0;RPB=0.322238;SGB=123.342;VDB=0.282789;EFF=INTRON(MODIFIER||||3316|LOC_Os04g48094|protein_coding|CODING|LOC_Os04g48094.1|4|1) FN-241.SNP.4:28627587 chr04:028627587 0 W/28627587-28627587 FN-241 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g48094 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN929-S.SNP.4:28633614 chr04:028633614 0 W/28633614-28633614 FN929-S Single Base Substitution T-C INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN558-S.SNP.4:28636727 chr04:028636727 0 W/28636727-28636727 FN558-S Single Base Substitution G-A INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-170.SNP.4:28657501 chr04:028657501 0 W/28657501-28657501 FN-170 Single Base Substitution C-T INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-79.SNP.4:28670715 chr04:028670715 0 W/28670715-28670715 FN-79 Single Base Substitution T-C INTERGENIC HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN-182.SNP.4:28675594 chr04:028675594 0 W/28675594-28675594 FN-182 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g48170 cytochrome P450, putative, expressed SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN505-S.SNP.4:28681303 chr04:028681303 0 W/28681303-28681303 FN505-S Single Base Substitution G-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1665-S.SNP.4:28689390 chr04:028689390 0 W/28689390-28689390 FN1665-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g48180 expressed protein SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1528-S.SNP.4:28692908 chr04:028692908 0 W/28692908-28692908 FN1528-S Single Base Substitution G-A INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN-137.SNP.4:28695580 chr04:028695580 0 W/28695580-28695580 FN-137 Single Base Substitution C-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3380-S.SNP.4:28696437 chr04:028696437 0 W/28696437-28696437 FN3380-S SNP G -> T AC=1;AN=184;BQB=0.598625;DP=3098;DP4=1597,1421,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00613299;MQB=4.78002e-06;MQSB=0.00522957;RPB=0.993833;SGB=39.2697;VDB=0.83653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.4:28696440 chr04:028696440 0 W/28696440-28696440 FN3380-S SNP G -> T AC=1;AN=184;BQB=0.975768;DP=3089;DP4=1585,1434,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00582713;MQB=1.51503e-05;MQSB=0.00663014;RPB=0.999988;SGB=44.2207;VDB=0.878897;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.4:28698906 chr04:028698906 0 W/28698906-28698906 FN901-S Single Base Substitution G-A INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN961-S.SNP.4:28706548 chr04:028706548 0 W/28706548-28706548 FN961-S Single Base Substitution A-G INTRON HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3528-S.SNP.4:28707850 chr04:028707850 0 W/28707850-28707850 FN3528-S SNP A -> T AC=1;AN=188;BQB=0.899173;DP=2763;DP4=1312,1364,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.5183e-10;MQSB=0.983577;RPB=0.602724;SGB=60.7873;VDB=0.529762;EFF=INTRON(MODIFIER||||482|LOC_Os04g48200|protein_coding|CODING|LOC_Os04g48200.1|1|1) FN929-S.SNP.4:28709539 chr04:028709539 0 W/28709539-28709539 FN929-S Single Base Substitution A-G INTERGENIC HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. 701-3.SNP.4:28711950 chr04:028711950 0 W/28711950-28711950 701-3 Single Base Substitution T-A INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN2698-S.SNP.4:28713943 chr04:028713943 0 W/28713943-28713943 FN2698-S SNP T -> C AC=2;AN=200;BQB=0.707529;DP=4543;DP4=2049,2239,18,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.2693e-22;MQSB=0.801946;RPB=0.4282;SGB=39.9882;VDB=0.102421;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.4:28714245 chr04:028714245 0 W/28714245-28714245 FN874-S Single Base Substitution G-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN354-S.SNP.4:28717881 chr04:028717881 0 W/28717881-28717881 FN354-S Single Base Substitution C-T INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN502-S.SNP.4:28724018 chr04:028724018 0 W/28724018-28724018 FN502-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2631-S.SNP.4:28727461 chr04:028727461 0 W/28727461-28727461 FN2631-S SNP C -> G AC=1;AN=200;BQB=0.880614;DP=4556;DP4=2081,2228,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57403e-09;MQSB=0.983473;RPB=0.370176;SGB=58.8698;VDB=0.236543;EFF=UTR_5_PRIME(MODIFIER||55||646|LOC_Os04g48230|protein_coding|CODING|LOC_Os04g48230.1|1|1),UTR_5_PRIME(MODIFIER||55||646|LOC_Os04g48230|protein_coding|CODING|LOC_Os04g48230.2|1|1) W252-6-1.SNP.4:28743767 chr04:028743767 0 W/28743767-28743767 W252-6-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2219-S.SNP.4:28745359 chr04:028745359 0 W/28745359-28745359 FN2219-S SNP A -> T AC=1;AN=190;BQB=0.998766;DP=5232;DP4=2442,2443,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61084e-10;MQSB=0.921098;RPB=0.273745;SGB=50.3161;VDB=0.343743;EFF=INTRON(MODIFIER||||254|LOC_Os04g48260|protein_coding|CODING|LOC_Os04g48260.1|2|1) FN-107.SNP.4:28748525 chr04:028748525 0 W/28748525-28748525 FN-107 Single Base Substitution G-A INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1633-S.SNP.4:28748525 chr04:028748525 0 W/28748525-28748525 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3056-S.SNP.4:28748525 chr04:028748525 0 W/28748525-28748525 FN3056-S SNP G -> A AC=2;AN=184;BQB=0.589807;DP=2858;DP4=1207,1497,15,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.20497e-17;MQSB=0.959129;RPB=0.796657;SGB=-43.4035;VDB=0.306629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.4:28748667 chr04:028748667 0 W/28748667-28748667 FN2164-S SNP T -> G AC=1;AN=168;BQB=7.34425e-06;DP=3625;DP4=1755,1811,21,24;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28082e-13;MQSB=0.999465;RPB=0.936889;SGB=-547.414;VDB=0.914599;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.4:28766209 chr04:028766209 0 W/28766209-28766209 FN1080-S Single Base Substitution G-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-72.SNP.4:28784429 chr04:028784429 0 W/28784429-28784429 FN-72 Single Base Substitution G-A INTERGENIC HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2484.SNP.4:28787571 chr04:028787571 0 W/28787571-28787571 FN2484 SNP G -> A AC=1;AN=200;BQB=0.655908;DP=4485;DP4=1977,2212,10,9;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0477146;MQB=0.492659;MQSB=0;RPB=0.725477;SGB=58.2954;VDB=0.935167;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R4|215|LOC_Os04g48300|protein_coding|CODING|LOC_Os04g48300.1|1|1) FN4179-S.SNP.4:28792179 chr04:028792179 0 W/28792179-28792179 FN4179-S SNP G -> T AC=2;AN=170;BQB=0.571973;DP=2214;DP4=1321,752,18,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.50492e-11;MQSB=0.0517555;RPB=0.493334;SGB=118.955;VDB=0.602941;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.4:28792732 chr04:028792732 0 W/28792732-28792732 FN-108 Single Base Substitution T-A INTERGENIC HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-108.SNP.4:28792733 chr04:028792733 0 W/28792733-28792733 FN-108 Single Base Substitution C-A INTERGENIC HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3332-S.SNP.4:28795422 chr04:028795422 0 W/28795422-28795422 FN3332-S SNP G -> T AC=1;AN=184;BQB=0.995224;DP=3157;DP4=1626,1360,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000316756;MQB=2.36659e-07;MQSB=0.00405412;RPB=0.83146;SGB=75.8731;VDB=0.385942;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.4:28813802 chr04:028813802 0 W/28813802-28813802 FN3607-S SNP T -> C AC=2;AN=190;BQB=0.514485;DP=2257;DP4=732,1134,9,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45938e-12;MQSB=0.655876;RPB=0.520762;SGB=-66.0937;VDB=0.28412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.4:28819474 chr04:028819474 0 W/28819474-28819474 FN3694-S SNP A -> G AC=1;AN=190;BQB=0.940488;DP=2812;DP4=1302,1363,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35429e-06;MQSB=0.976546;RPB=0.789802;SGB=21.8853;VDB=0.228571;EFF=INTERGENIC(MODIFIER||||||||||1) FN-79.SNP.4:28819602 chr04:028819602 0 W/28819602-28819602 FN-79 Single Base Substitution G-A INTERGENIC HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN-79.SNP.4:28819603 chr04:028819603 0 W/28819603-28819603 FN-79 Single Base Substitution T-A INTERGENIC HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1660-S.SNP.4:28824811 chr04:028824811 0 W/28824811-28824811 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2429.SNP.4:28828925 chr04:028828925 0 W/28828925-28828925 FN2429 SNP T -> C AC=1;AN=200;BQB=0.991662;DP=4744;DP4=2183,2294,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.23552e-17;MQSB=0.545889;RPB=0.984123;SGB=65.9573;VDB=0.819646;EFF=INTRON(MODIFIER||||393|LOC_Os04g48360|protein_coding|CODING|LOC_Os04g48360.1|2|1) FN-105.SNP.4:28829000 chr04:028829000 0 W/28829000-28829000 FN-105 Single Base Substitution T-C INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN4143-S.SNP.4:28832637 chr04:028832637 0 W/28832637-28832637 FN4143-S SNP A -> G AC=1;AN=170;BQB=0.822251;DP=2524;DP4=1245,1180,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.76191e-08;MQSB=0.762644;RPB=0.965827;SGB=24.7692;VDB=0.389411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.4:28847908 chr04:028847908 0 W/28847908-28847908 FN2671-S SNP G -> A AC=1;AN=200;BQB=0.280962;DP=5372;DP4=2897,2181,51,11;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.125279;MQB=5.85213e-21;MQSB=5.01038e-39;RPB=2.32771e-11;SGB=-1984.49;VDB=3.67326e-07;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.4:28848539 chr04:028848539 0 W/28848539-28848539 FN4147-S SNP C -> T AC=2;AN=170;BQB=0.634328;DP=2289;DP4=1173,1043,10,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.68953e-08;MQSB=0.252191;RPB=0.999963;SGB=55.5339;VDB=0.338412;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.4:28850552 chr04:028850552 0 W/28850552-28850552 FN-131 Single Base Substitution T-A INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-375.SNP.4:28853184 chr04:028853184 0 W/28853184-28853184 FN-375 Single Base Substitution G-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. W674-4-1.SNP.4:28855942 chr04:028855942 0 W/28855942-28855942 W674-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2471.SNP.4:28856401 chr04:028856401 0 W/28856401-28856401 FN2471 SNP G -> A AC=1;AN=200;BQB=0.571149;DP=4746;DP4=2103,2345,21,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23161e-16;MQSB=0.996836;RPB=0.9362;SGB=-2.82234;VDB=0.935584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.4:28857742 chr04:028857742 0 W/28857742-28857742 FN1318-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN4135-S.SNP.4:28881846 chr04:028881846 0 W/28881846-28881846 FN4135-S SNP G -> T AC=1;AN=182;BQB=0.834039;DP=3262;DP4=1701,1490,10,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.65833e-10;MQSB=0.952494;RPB=0.962932;SGB=84.7091;VDB=0.812383;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.4:28888829 chr04:028888829 0 W/28888829-28888829 FN944-S Single Base Substitution C-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1638-S.SNP.4:28891450 chr04:028891450 0 W/28891450-28891450 FN1638-S Single Base Substitution T-C INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3356-S.SNP.4:28893437 chr04:028893437 0 W/28893437-28893437 FN3356-S SNP T -> C AC=2;AN=184;BQB=0.942028;DP=3777;DP4=1624,1959,23,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.70072e-26;MQSB=0.9247;RPB=0.917359;SGB=-49.1421;VDB=0.639415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I252T|506|LOC_Os04g48460|protein_coding|CODING|LOC_Os04g48460.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I252T|402|LOC_Os04g48460|protein_coding|CODING|LOC_Os04g48460.2|1|1) FN3714-S.SNP.4:28893437 chr04:028893437 0 W/28893437-28893437 FN3714-S SNP T -> C AC=2;AN=190;BQB=0.91201;DP=3291;DP4=1493,1560,31,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.60445e-32;MQSB=0.923121;RPB=0.956212;SGB=235.702;VDB=0.431063;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I252T|506|LOC_Os04g48460|protein_coding|CODING|LOC_Os04g48460.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I252T|402|LOC_Os04g48460|protein_coding|CODING|LOC_Os04g48460.2|1|1) FN2456.SNP.4:28908060 chr04:028908060 0 W/28908060-28908060 FN2456 SNP T -> C AC=2;AN=200;BQB=0.956836;DP=4514;DP4=2136,2037,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.7929e-21;MQSB=0.623963;RPB=0.896914;SGB=130.399;VDB=0.355272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.4:28920783 chr04:028920783 0 W/28920783-28920783 FN3705-S SNP C -> T AC=1;AN=190;BQB=0.652069;DP=2783;DP4=1260,1381,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.92143e-08;MQSB=0.96286;RPB=0.902326;SGB=39.6545;VDB=0.5863;EFF=INTRON(MODIFIER||||397|LOC_Os04g48500|protein_coding|CODING|LOC_Os04g48500.1|3|1) FN-62.SNP.4:28922831 chr04:028922831 0 W/28922831-28922831 FN-62 Single Base Substitution C-T INTRON HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN424-S.SNP.4:28935132 chr04:028935132 0 W/28935132-28935132 FN424-S Single Base Substitution A-T INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1429-S.SNP.4:28941783 chr04:028941783 0 W/28941783-28941783 FN1429-S Single Base Substitution A-T INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3494-S.SNP.4:28943121 chr04:028943121 0 W/28943121-28943121 FN3494-S SNP T -> G AC=2;AN=184;BQB=0.810167;DP=2620;DP4=1210,1283,17,15;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00114504;MQB=2.71905e-14;MQSB=0.996666;RPB=0.717377;SGB=102.662;VDB=0.565641;EFF=INTERGENIC(MODIFIER||||||||||1) FN_846-8-1.SNP.4:28944853 chr04:028944853 0 W/28944853-28944853 FN_846-8-1 Single Base Substitution G-A Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN1068-S.SNP.4:28949187 chr04:028949187 0 W/28949187-28949187 FN1068-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN418-S.SNP.4:28956080 chr04:028956080 0 W/28956080-28956080 FN418-S Single Base Substitution C-A INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-187.SNP.4:28957855 chr04:028957855 0 W/28957855-28957855 FN-187 Single Base Substitution G-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN895-S.SNP.4:28959074 chr04:028959074 0 W/28959074-28959074 FN895-S Single Base Substitution T-C INTRON HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1576-S.SNP.4:28960161 chr04:028960161 0 W/28960161-28960161 FN1576-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g48590 retrotransposon protein, putative, unclassified, expressed SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN531-S.SNP.4:28961860 chr04:028961860 0 W/28961860-28961860 FN531-S Single Base Substitution A-G INTERGENIC HET SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN-218.SNP.4:28962388 chr04:028962388 0 W/28962388-28962388 FN-218 Single Base Substitution A-G INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN928-S.SNP.4:28967421 chr04:028967421 0 W/28967421-28967421 FN928-S Single Base Substitution C-T INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN956-S.SNP.4:28969918 chr04:028969918 0 W/28969918-28969918 FN956-S Single Base Substitution T-C INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2667-S.SNP.4:28979118 chr04:028979118 0 W/28979118-28979118 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.461458;DP=4086;DP4=2054,1827,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78989e-07;MQSB=0.504578;RPB=0.724909;SGB=58.8698;VDB=0.891163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.4:28987408 chr04:028987408 0 W/28987408-28987408 FN1380-S Single Base Substitution C-T INTRON HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN4065-S.SNP.4:28991770 chr04:028991770 0 W/28991770-28991770 FN4065-S SNP G -> A AC=1;AN=168;BQB=0.697221;DP=2565;DP4=1369,1104,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.17193;MQB=0.773095;MQSB=0;RPB=0.57295;SGB=-38.3665;VDB=0.424525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.4:28993709 chr04:028993709 0 W/28993709-28993709 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.54211;DP=3799;DP4=2106,1390,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0144775;MQB=0.990038;MQSB=0.0487231;RPB=0.454819;SGB=51.7524;VDB=0.833132;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.4:29000725 chr04:029000725 0 W/29000725-29000725 FN4114-S SNP T -> C AC=1;AN=182;BQB=0.992335;DP=2953;DP4=1156,1279,25,14;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=3.32056e-14;MQSB=0.930381;RPB=0.47909;SGB=-482.165;VDB=0.895646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.4:29003813 chr04:029003813 0 W/29003813-29003813 FN1290-S Single Base Substitution C-G INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN-283.SNP.4:29007134 chr04:029007134 0 W/29007134-29007134 FN-283 Single Base Substitution G-A INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2574-S.SNP.4:29010566 chr04:029010566 0 W/29010566-29010566 FN2574-S SNP T -> A AC=1;AN=198;BQB=0.200847;DP=4518;DP4=2175,2056,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000416912;MQSB=0.818424;RPB=0.852176;SGB=-1.81641;VDB=0.817242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E1089V|1537|LOC_Os04g48660|protein_coding|CODING|LOC_Os04g48660.1|3|1) FN3821-S.SNP.4:29013633 chr04:029013633 0 W/29013633-29013633 FN3821-S SNP T -> C AC=1;AN=190;BQB=0.954679;DP=2908;DP4=1573,1220,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00137552;MQB=0.000188387;MQSB=6.42723e-12;RPB=0.30108;SGB=35.4339;VDB=0.583058;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q574R|1537|LOC_Os04g48660|protein_coding|CODING|LOC_Os04g48660.1|1|1) FN2667-S.SNP.4:29013810 chr04:029013810 0 W/29013810-29013810 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.391108;DP=7112;DP4=3160,3508,15,7;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00773341;MQB=0.101174;MQSB=0.000419111;RPB=0.877406;SGB=95.7111;VDB=0.699758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A515V|1537|LOC_Os04g48660|protein_coding|CODING|LOC_Os04g48660.1|1|1) FN2617-S.SNP.4:29014806 chr04:029014806 0 W/29014806-29014806 FN2617-S SNP C -> A AC=1;AN=198;BQB=0.883546;DP=7369;DP4=3582,3401,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.34611e-11;MQSB=0.413846;RPB=0.478508;SGB=17.325;VDB=0.0248901;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G183V|1537|LOC_Os04g48660|protein_coding|CODING|LOC_Os04g48660.1|1|1) FN2375.SNP.4:29016580 chr04:029016580 0 W/29016580-29016580 FN2375 SNP C -> A AC=1;AN=192;BQB=0.00733168;DP=5550;DP4=2266,2760,14,6;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.107928;MQB=0.985919;MQSB=0;RPB=0.979127;SGB=-86.1887;VDB=0.840279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.4:29018538 chr04:029018538 0 W/29018538-29018538 FN3934-S SNP T -> C AC=1;AN=158;BQB=0.954785;DP=2598;DP4=1118,1385,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.153195;MQB=0.920125;MQSB=0.633079;RPB=0.184554;SGB=40.8124;VDB=0.360071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.4:29020269 chr04:029020269 0 W/29020269-29020269 FN3798-S SNP G -> T AC=1;AN=190;BQB=0.823595;DP=2516;DP4=1441,918,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00357711;MQB=0.000101115;MQSB=0.128552;RPB=0.922239;SGB=39.6545;VDB=0.523781;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.4:29021009 chr04:029021009 0 W/29021009-29021009 FN4183-S SNP C -> T AC=1;AN=170;BQB=0.521744;DP=3088;DP4=1868,1071,63,17;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0320596;MQB=7.05631e-34;MQSB=1.00258e-13;RPB=8.81605e-18;SGB=-1459.03;VDB=3.34829e-11;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.4:29025447 chr04:029025447 0 W/29025447-29025447 FN858-S Single Base Substitution C-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3326-S.SNP.4:29025479 chr04:029025479 0 W/29025479-29025479 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.532593;DP=3533;DP4=1956,1418,19,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36868e-14;MQSB=0.425287;RPB=0.818238;SGB=23.542;VDB=0.112953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.4:29026005 chr04:029026005 0 W/29026005-29026005 FN3577-S SNP T -> C AC=1;AN=188;BQB=0.812925;DP=3737;DP4=1299,2171,11,26;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.67802e-17;MQSB=0.859729;RPB=0.892801;SGB=-3.59057;VDB=0.809588;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.4:29026301 chr04:029026301 0 W/29026301-29026301 FN2122-S SNP G -> T AC=2;AN=168;BQB=0.883874;DP=2363;DP4=1197,1103,11,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.16782e-12;MQSB=0.94256;RPB=0.884807;SGB=62.1945;VDB=0.58792;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.4:29034054 chr04:029034054 0 W/29034054-29034054 FN2486 SNP A -> C AC=1;AN=200;BQB=0.787701;DP=4617;DP4=2411,1887,9,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27599e-15;MQSB=0.955929;RPB=0.990982;SGB=27.1468;VDB=0.737455;EFF=INTRON(MODIFIER||||288|LOC_Os04g48700|protein_coding|CODING|LOC_Os04g48700.1|3|1) FN-223.SNP.4:29034416 chr04:029034416 0 W/29034416-29034416 FN-223 Single Base Substitution C-T INTRON HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-312.SNP.4:29039405 chr04:029039405 0 W/29039405-29039405 FN-312 Single Base Substitution A-G INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN-312.SNP.4:29039406 chr04:029039406 0 W/29039406-29039406 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN2785-S.SNP.4:29050025 chr04:029050025 0 W/29050025-29050025 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.966425;DP=3868;DP4=1897,1798,17,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.87618e-14;MQSB=0.999401;RPB=0.700839;SGB=118.476;VDB=0.926467;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.4:29050388 chr04:029050388 0 W/29050388-29050388 FN1553-S Single Base Substitution G-T INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN3545-S.SNP.4:29054081 chr04:029054081 0 W/29054081-29054081 FN3545-S SNP G -> T AC=1;AN=188;BQB=0.926163;DP=2610;DP4=1336,1166,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.50978e-07;MQSB=0.977324;RPB=0.988451;SGB=44.4357;VDB=0.99414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.4:29055966 chr04:029055966 0 W/29055966-29055966 FN1288-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN894-S.SNP.4:29058079 chr04:029058079 0 W/29058079-29058079 FN894-S Single Base Substitution C-A INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2666-S.SNP.4:29084546 chr04:029084546 0 W/29084546-29084546 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.84441;DP=4644;DP4=2239,2132,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.21402e-13;MQSB=0.932106;RPB=0.896673;SGB=72.7161;VDB=0.178484;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D613E|1104|LOC_Os04g48760|protein_coding|CODING|LOC_Os04g48760.1|2|1) FN714-S.SNP.4:29110317 chr04:029110317 0 W/29110317-29110317 FN714-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1547-S.SNP.4:29124785 chr04:029124785 0 W/29124785-29124785 FN1547-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN690-S.SNP.4:29138465 chr04:029138465 0 W/29138465-29138465 FN690-S Single Base Substitution A-T INTERGENIC HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN975-S.SNP.4:29148628 chr04:029148628 0 W/29148628-29148628 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN3903-S.SNP.4:29149216 chr04:029149216 0 W/29149216-29149216 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.998021;DP=2707;DP4=1601,986,12,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.71819e-13;MQSB=0.984115;RPB=0.315079;SGB=67.7679;VDB=0.161919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.4:29153756 chr04:029153756 0 W/29153756-29153756 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.506452;DP=3011;DP4=1419,1500,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000101703;MQSB=0.954495;RPB=0.896003;SGB=32.2261;VDB=0.936239;EFF=UTR_3_PRIME(MODIFIER||222||127|LOC_Os04g48870|protein_coding|CODING|LOC_Os04g48870.1|2|1) FN_770-6-1.SNP.4:29159933 chr04:029159933 0 W/29159933-29159933 FN_770-6-1 Single Base Substitution T-A HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN3848-S.SNP.4:29165439 chr04:029165439 0 W/29165439-29165439 FN3848-S SNP A -> G AC=1;AN=158;BQB=0.66908;DP=2655;DP4=1226,1362,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.00975e-05;MQSB=0.613247;RPB=0.991238;SGB=42.6978;VDB=0.763155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.4:29166109 chr04:029166109 0 W/29166109-29166109 FN1702-S SNP C -> T AC=1;AN=188;BQB=0.00543522;DP=3596;DP4=1584,1977,5,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0044702;MQSB=0.985264;RPB=0.226676;SGB=-110.978;VDB=0.136381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.4:29166109 chr04:029166109 0 W/29166109-29166109 FN3456-S SNP C -> T AC=2;AN=184;BQB=0.76127;DP=2723;DP4=1360,1271,11,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.0008e-10;MQSB=0.997984;RPB=0.809739;SGB=33.3622;VDB=0.504805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.4:29167214 chr04:029167214 0 W/29167214-29167214 FN-92 Single Base Substitution A-G INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN3820-S.SNP.4:29167432 chr04:029167432 0 W/29167432-29167432 FN3820-S SNP A -> G AC=1;AN=190;BQB=0.901358;DP=2705;DP4=1518,1066,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.10229e-12;MQSB=0.158659;RPB=0.720683;SGB=64.5316;VDB=0.695528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.4:29170855 chr04:029170855 0 W/29170855-29170855 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.918058;DP=3165;DP4=1374,1720,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0129542;MQB=4.94077e-05;MQSB=0.235292;RPB=0.52901;SGB=39.699;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.4:29172601 chr04:029172601 0 W/29172601-29172601 FN4083-S SNP C -> T AC=1;AN=182;BQB=0.993836;DP=3155;DP4=1578,1475,16,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.0066561;MQB=3.0925e-18;MQSB=0.824512;RPB=0.867338;SGB=95.3123;VDB=0.565549;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S454|788|LOC_Os04g48910|protein_coding|CODING|LOC_Os04g48910.1|1|1) FN4083-S.SNP.4:29172602 chr04:029172602 0 W/29172602-29172602 FN4083-S SNP T -> C AC=1;AN=182;BQB=0.984098;DP=3144;DP4=1569,1478,15,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00667939;MQB=2.99267e-18;MQSB=0.780231;RPB=0.783951;SGB=95.3123;VDB=0.586668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y455H|788|LOC_Os04g48910|protein_coding|CODING|LOC_Os04g48910.1|1|1) FN1576-S.SNP.4:29188038 chr04:029188038 0 W/29188038-29188038 FN1576-S Single Base Substitution G-T INTRON Homo SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3770-S.SNP.4:29191667 chr04:029191667 0 W/29191667-29191667 FN3770-S SNP G -> A AC=1;AN=190;BQB=0.969129;DP=2767;DP4=1293,1328,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52683e-07;MQSB=0.961205;RPB=0.743491;SGB=36.1006;VDB=0.354017;EFF=INTRON(MODIFIER||||524|LOC_Os04g48940|protein_coding|CODING|LOC_Os04g48940.1|5|1),INTRON(MODIFIER||||524|LOC_Os04g48940|protein_coding|CODING|LOC_Os04g48940.2|5|1),INTRON(MODIFIER||||494|LOC_Os04g48940|protein_coding|CODING|LOC_Os04g48940.3|6|1) FN734-S.SNP.4:29198852 chr04:029198852 0 W/29198852-29198852 FN734-S Single Base Substitution A-C INTRON HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN2324.SNP.4:29202312 chr04:029202312 0 W/29202312-29202312 FN2324 SNP G -> A AC=1;AN=192;BQB=0.827476;DP=10106;DP4=4735,4870,24,28;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=9.48141e-07;MQSB=0.59939;RPB=0.687463;SGB=5.54786;VDB=0.968319;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D426|782|LOC_Os04g48970|protein_coding|CODING|LOC_Os04g48970.1|3|1) FN-182.SNP.4:29207566 chr04:029207566 0 W/29207566-29207566 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3382-S.SNP.4:29221252 chr04:029221252 0 W/29221252-29221252 FN3382-S SNP G -> A AC=2;AN=184;BQB=0.846529;DP=2663;DP4=630,1940,13,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.2184e-19;MQSB=0.88456;RPB=0.979788;SGB=116.749;VDB=0.139523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.4:29230670 chr04:029230670 0 W/29230670-29230670 FN2454 SNP G -> A AC=1;AN=200;BQB=0.793314;DP=4293;DP4=1926,2041,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.69474e-05;MQSB=0.504094;RPB=0.475069;SGB=45.0543;VDB=0.525133;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H540|578|LOC_Os04g49040|protein_coding|CODING|LOC_Os04g49040.1|9|1) FN1512-S.SNP.4:29231856 chr04:029231856 0 W/29231856-29231856 FN1512-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1512-S.SNP.4:29231874 chr04:029231874 0 W/29231874-29231874 FN1512-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3446-S.SNP.4:29235245 chr04:029235245 0 W/29235245-29235245 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.815484;DP=2751;DP4=1260,1324,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.10304e-10;MQSB=0.8903;RPB=0.945363;SGB=66.8296;VDB=0.694045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.4:29244765 chr04:029244765 0 W/29244765-29244765 FN2182-S SNP A -> T AC=1;AN=190;BQB=0.970787;DP=4881;DP4=2299,2255,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.08324e-06;MQSB=0.049745;RPB=0.821143;SGB=4.11112;VDB=0.56545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.4:29244980 chr04:029244980 0 W/29244980-29244980 FN2284 SNP G -> A AC=1;AN=192;BQB=0.947244;DP=4440;DP4=1898,2301,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.27808e-09;MQSB=0.87914;RPB=0.182952;SGB=54.0374;VDB=0.792253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.4:29246645 chr04:029246645 0 W/29246645-29246645 FN3606-S SNP T -> G AC=1;AN=190;BQB=0.754483;DP=2514;DP4=1220,1164,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000709196;MQSB=0.880155;RPB=0.262465;SGB=8.33661;VDB=0.594468;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.4:29247289 chr04:029247289 0 W/29247289-29247289 FN2785-S SNP G -> T AC=1;AN=198;BQB=0.970148;DP=3048;DP4=923,1865,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000328084;MQB=5.81139e-08;MQSB=5.72414e-16;RPB=0.316589;SGB=67.9293;VDB=0.518066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.4:29250897 chr04:029250897 0 W/29250897-29250897 FN1123-S Single Base Substitution G-A INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN798-S.SNP.4:29252121 chr04:029252121 0 W/29252121-29252121 FN798-S Single Base Substitution T-G INTERGENIC HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN897-S.SNP.4:29279097 chr04:029279097 0 W/29279097-29279097 FN897-S Single Base Substitution A-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2696-S.SNP.4:29283180 chr04:029283180 0 W/29283180-29283180 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.173141;DP=5052;DP4=2566,2226,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00138559;MQB=1.87141e-11;MQSB=0.412084;RPB=0.957611;SGB=72.7161;VDB=0.0484279;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.4:29283325 chr04:029283325 0 W/29283325-29283325 FN2650-S SNP G -> A AC=2;AN=200;BQB=0.999462;DP=4854;DP4=2116,2460,22,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.12449e-17;MQSB=1;RPB=0.993668;SGB=148.425;VDB=0.642212;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N227|239|LOC_Os04g49120|protein_coding|CODING|LOC_Os04g49120.1|4|1) FN3095-S.SNP.4:29286842 chr04:029286842 0 W/29286842-29286842 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.975872;DP=3339;DP4=1819,1353,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.59309e-08;MQSB=0.807454;RPB=0.245707;SGB=-0.806606;VDB=0.622197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.4:29288240 chr04:029288240 0 W/29288240-29288240 FN1116-S Single Base Substitution A-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1673-S.SNP.4:29288240 chr04:029288240 0 W/29288240-29288240 FN1673-S SNP A -> T AC=1;AN=188;BQB=0.000863089;DP=3704;DP4=1683,1935,7,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000135108;MQSB=0.761776;RPB=0.996531;SGB=-96.2673;VDB=0.272573;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.4:29288240 chr04:029288240 0 W/29288240-29288240 FN4088-S SNP A -> T AC=2;AN=182;BQB=0.875568;DP=2874;DP4=1397,1337,11,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.57663e-11;MQSB=0.854279;RPB=0.517016;SGB=12.7039;VDB=0.0448212;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.4:29288240 chr04:029288240 0 W/29288240-29288240 FN449-S Single Base Substitution A-T INTERGENIC HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN588-S.SNP.4:29288240 chr04:029288240 0 W/29288240-29288240 FN588-S Single Base Substitution A-T INTERGENIC HOMO SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3552-S.SNP.4:29304968 chr04:029304968 0 W/29304968-29304968 FN3552-S SNP T -> C AC=1;AN=186;BQB=0.310574;DP=2551;DP4=1207,1265,6,3;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.00189174;MQSB=0.465045;RPB=0.775029;SGB=35.3493;VDB=0.401367;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.4:29313028 chr04:029313028 0 W/29313028-29313028 FN748-S Single Base Substitution A-C INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1735-S.SNP.4:29314722 chr04:029314722 0 W/29314722-29314722 FN1735-S SNP C -> G AC=1;AN=188;BQB=0.0104751;DP=3032;DP4=1365,1624,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43705e-07;MQSB=0.999995;RPB=0.979196;SGB=-128.262;VDB=0.995935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.4:29316027 chr04:029316027 0 W/29316027-29316027 FN2234-S SNP T -> A AC=1;AN=190;BQB=0.42885;DP=4792;DP4=2056,2332,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.85989e-12;MQSB=0.905631;RPB=0.997119;SGB=-9.89872;VDB=0.498592;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.4:29319074 chr04:029319074 0 W/29319074-29319074 FN_N1-202-3 Single Base Substitution G-A HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN3365-S.SNP.4:29325463 chr04:029325463 0 W/29325463-29325463 FN3365-S SNP C -> T AC=1;AN=184;BQB=0.993603;DP=4071;DP4=1989,1959,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.17889e-08;MQSB=0.99177;RPB=0.850984;SGB=48.7425;VDB=0.0512963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.4:29327638 chr04:029327638 0 W/29327638-29327638 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.645008;DP=4278;DP4=2114,1861,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.22097e-11;MQSB=0.982384;RPB=0.79144;SGB=39.7248;VDB=0.144567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.4:29336760 chr04:029336760 0 W/29336760-29336760 FN2275-S SNP T -> G AC=1;AN=190;BQB=0.997524;DP=4615;DP4=2391,1846,18,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25648e-16;MQSB=0.989747;RPB=0.260673;SGB=77.2911;VDB=0.335973;EFF=INTRON(MODIFIER||||340|LOC_Os04g49194|protein_coding|CODING|LOC_Os04g49194.1|2|1) FN-44.SNP.4:29345196 chr04:029345196 0 W/29345196-29345196 FN-44 Single Base Substitution A-G INTERGENIC HET SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN460-S.SNP.4:29347884 chr04:029347884 0 W/29347884-29347884 FN460-S Single Base Substitution T-A INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. W481-5-1.SNP.4:29359604 chr04:029359604 0 W/29359604-29359604 W481-5-1 Single Base Substitution T-C INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-172.SNP.4:29361092 chr04:029361092 0 W/29361092-29361092 FN-172 Single Base Substitution T-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1735-S.SNP.4:29361230 chr04:029361230 0 W/29361230-29361230 FN1735-S SNP T -> A AC=1;AN=188;BQB=0.925297;DP=3670;DP4=1828,1804,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.56859e-12;MQSB=0.996737;RPB=0.953815;SGB=17.8846;VDB=0.980393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.4:29361302 chr04:029361302 0 W/29361302-29361302 FN3460-S SNP C -> A AC=2;AN=184;BQB=0.978836;DP=2426;DP4=1248,1091,6,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.27063e-13;MQSB=0.970766;RPB=0.978411;SGB=89.4385;VDB=0.653429;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.4:29366995 chr04:029366995 0 W/29366995-29366995 FN869-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-228.SNP.4:29375153 chr04:029375153 0 W/29375153-29375153 FN-228 Single Base Substitution A-C INTERGENIC HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2082-S.SNP.4:29380342 chr04:029380342 0 W/29380342-29380342 FN2082-S SNP A -> T AC=2;AN=168;BQB=0.0321507;DP=3633;DP4=1697,1845,21,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.10525e-08;MQSB=0.620952;RPB=0.943473;SGB=-303.73;VDB=0.283844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.4:29380342 chr04:029380342 0 W/29380342-29380342 FN3569-S SNP A -> T AC=1;AN=188;BQB=0.984815;DP=2820;DP4=1414,1308,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17768e-10;MQSB=0.669902;RPB=0.9831;SGB=-10.6534;VDB=0.437074;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.4:29388788 chr04:029388788 0 W/29388788-29388788 FN862-S Single Base Substitution A-G INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2475.SNP.4:29393773 chr04:029393773 0 W/29393773-29393773 FN2475 SNP T -> G AC=1;AN=200;BQB=0.0937046;DP=5264;DP4=2283,2749,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06688e-11;MQSB=0.713737;RPB=0.962818;SGB=65.5058;VDB=0.78887;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.4:29405429 chr04:029405429 0 W/29405429-29405429 FN-206 Single Base Substitution G-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN4049-S.SNP.4:29415698 chr04:029415698 0 W/29415698-29415698 FN4049-S SNP C -> T AC=1;AN=168;BQB=0.99674;DP=2519;DP4=1282,1105,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53395e-06;MQSB=0.942252;RPB=0.562132;SGB=38.1788;VDB=0.131699;EFF=INTRON(MODIFIER||||813|LOC_Os04g49270|protein_coding|CODING|LOC_Os04g49270.1|2|1) FN3777-S.SNP.4:29430478 chr04:029430478 0 W/29430478-29430478 FN3777-S SNP G -> T AC=1;AN=190;BQB=0.648697;DP=2828;DP4=1396,1194,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=3.53318e-06;MQSB=0.461341;RPB=0.272883;SGB=28.7675;VDB=0.856416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.4:29434225 chr04:029434225 0 W/29434225-29434225 FN1029-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g49310 tRNA-splicing endonuclease positive effector-related, putative, expressed SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2492.SNP.4:29440165 chr04:029440165 0 W/29440165-29440165 FN2492 SNP G -> T AC=1;AN=200;BQB=0.714569;DP=4868;DP4=2274,2384,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.20033e-14;MQSB=0.927409;RPB=0.131085;SGB=-37.2897;VDB=0.0131268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S487Y|738|LOC_Os04g49320|protein_coding|CODING|LOC_Os04g49320.1|2|1) FN3372-S.SNP.4:29464985 chr04:029464985 0 W/29464985-29464985 FN3372-S SNP C -> T AC=2;AN=184;BQB=0.995844;DP=2365;DP4=1228,926,13,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.55262e-09;MQSB=0.504319;RPB=0.576472;SGB=33.3622;VDB=0.93435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.4:29470438 chr04:029470438 0 W/29470438-29470438 FN2204-S SNP T -> G AC=1;AN=190;BQB=0.99709;DP=4572;DP4=2135,2161,20,15;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00503062;MQB=1.27428e-10;MQSB=7.84822e-05;RPB=0.247139;SGB=114.286;VDB=0.179917;EFF=INTRON(MODIFIER||||1005|LOC_Os04g49380|protein_coding|CODING|LOC_Os04g49380.1|4|1) FN3749-S.SNP.4:29484845 chr04:029484845 0 W/29484845-29484845 FN3749-S SNP A -> T AC=1;AN=190;BQB=0.471914;DP=2603;DP4=1236,1244,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97027e-09;MQSB=0.998572;RPB=0.887781;SGB=67.3108;VDB=0.782052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.4:29488624 chr04:029488624 0 W/29488624-29488624 FN2121-S SNP T -> C AC=1;AN=168;BQB=0.00974554;DP=3576;DP4=1801,1716,20,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.9144e-09;MQSB=0.899994;RPB=0.983367;SGB=-43.4892;VDB=0.713921;EFF=UTR_3_PRIME(MODIFIER||546||103|LOC_Os04g49420|protein_coding|CODING|LOC_Os04g49420.1|1|1),UTR_3_PRIME(MODIFIER||334||257|LOC_Os04g49410|protein_coding|CODING|LOC_Os04g49410.1|3|1) FN2121-S.SNP.4:29488800 chr04:029488800 0 W/29488800-29488800 FN2121-S SNP T -> C AC=1;AN=168;BQB=0.0188472;DP=3534;DP4=1594,1893,12,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.16765e-15;MQSB=0.908589;RPB=0.998201;SGB=-91.6059;VDB=0.641536;EFF=UTR_3_PRIME(MODIFIER||370||103|LOC_Os04g49420|protein_coding|CODING|LOC_Os04g49420.1|1|1),UTR_3_PRIME(MODIFIER||510||257|LOC_Os04g49410|protein_coding|CODING|LOC_Os04g49410.1|3|1) FN-95.SNP.4:29494664 chr04:029494664 0 W/29494664-29494664 FN-95 Single Base Substitution T-G INTRON HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-313.SNP.4:29497075 chr04:029497075 0 W/29497075-29497075 FN-313 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g49430 ZR1 protein, putative, expressed SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1405-S.SNP.4:29497624 chr04:029497624 0 W/29497624-29497624 FN1405-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g49430 ZR1 protein, putative, expressed SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN-63.SNP.4:29497748 chr04:029497748 0 W/29497748-29497748 FN-63 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g49430 ZR1 protein, putative, expressed SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2583-S.SNP.4:29498642 chr04:029498642 0 W/29498642-29498642 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.623699;DP=5286;DP4=2488,2532,19,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08407e-23;MQSB=0.989586;RPB=0.781526;SGB=137.609;VDB=0.990649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S970G|1041|LOC_Os04g49430|protein_coding|CODING|LOC_Os04g49430.1|7|1) W385-6-8-4.SNP.4:29508554 chr04:029508554 0 W/29508554-29508554 W385-6-8-4 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2496.SNP.4:29515181 chr04:029515181 0 W/29515181-29515181 FN2496 SNP A -> G AC=1;AN=200;BQB=0.950456;DP=4652;DP4=2125,2315,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.36759e-08;MQSB=0.961888;RPB=0.721856;SGB=16.4591;VDB=0.00589533;EFF=UTR_3_PRIME(MODIFIER||252||314|LOC_Os04g49490|protein_coding|CODING|LOC_Os04g49490.1|4|1),UTR_3_PRIME(MODIFIER||252||388|LOC_Os04g49490|protein_coding|CODING|LOC_Os04g49490.2|5|1) FN2484.SNP.4:29539802 chr04:029539802 0 W/29539802-29539802 FN2484 SNP T -> C AC=1;AN=200;BQB=0.993022;DP=5217;DP4=2898,2077,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.72021e-14;MQSB=0.424557;RPB=0.920066;SGB=95.7111;VDB=0.129857;EFF=INTRON(MODIFIER||||418|LOC_Os04g49530|protein_coding|CODING|LOC_Os04g49530.1|3|1) FN3298-S.SNP.4:29540442 chr04:029540442 0 W/29540442-29540442 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.929639;DP=2628;DP4=1250,1272,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.7687e-05;MQSB=0.957227;RPB=0.753922;SGB=18.1394;VDB=0.77747;EFF=INTRON(MODIFIER||||418|LOC_Os04g49530|protein_coding|CODING|LOC_Os04g49530.1|4|1) FN4156-S.SNP.4:29542403 chr04:029542403 0 W/29542403-29542403 FN4156-S SNP G -> T AC=1;AN=170;BQB=0.995012;DP=2547;DP4=1258,1233,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01336e-08;MQSB=0.876661;RPB=0.64729;SGB=52.3148;VDB=0.087529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D308E|319|LOC_Os04g49540|protein_coding|CODING|LOC_Os04g49540.1|4|1),UTR_3_PRIME(MODIFIER||632||418|LOC_Os04g49530|protein_coding|CODING|LOC_Os04g49530.1|6|1) FN1426-S.SNP.4:29551026 chr04:029551026 0 W/29551026-29551026 FN1426-S Single Base Substitution G-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN-167.SNP.4:29557157 chr04:029557157 0 W/29557157-29557157 FN-167 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g49560 zinc finger family protein, putative, expressed SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1565-S.SNP.4:29559382 chr04:029559382 0 W/29559382-29559382 FN1565-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN412-S.SNP.4:29560169 chr04:029560169 0 W/29560169-29560169 FN412-S Single Base Substitution A-G INTRON HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2614-S.SNP.4:29574145 chr04:029574145 0 W/29574145-29574145 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.568111;DP=4047;DP4=1982,1874,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.53368e-11;MQSB=0.973919;RPB=0.985147;SGB=39.7248;VDB=0.991877;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D353|590|LOC_Os04g49580|protein_coding|CODING|LOC_Os04g49580.1|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D353|532|LOC_Os04g49580|protein_coding|CODING|LOC_Os04g49580.2|10|1) FN3422-S.SNP.4:29581265 chr04:029581265 0 W/29581265-29581265 FN3422-S SNP G -> A AC=2;AN=184;BQB=0.988982;DP=3066;DP4=1359,1584,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.09469e-14;MQSB=0.86359;RPB=0.764181;SGB=125.613;VDB=0.9543;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.4:29584482 chr04:029584482 0 W/29584482-29584482 FN949-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g49610 expressed protein SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN1434-S.SNP.4:29586939 chr04:029586939 0 W/29586939-29586939 FN1434-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN982-S.SNP.4:29586993 chr04:029586993 0 W/29586993-29586993 FN982-S Single Base Substitution G-T INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN4146-S.SNP.4:29590552 chr04:029590552 0 W/29590552-29590552 FN4146-S SNP G -> A AC=1;AN=170;BQB=0.976099;DP=2996;DP4=1369,1506,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.21468e-11;MQSB=0.726202;RPB=0.126175;SGB=78.9707;VDB=0.733685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.4:29608322 chr04:029608322 0 W/29608322-29608322 FN3454-S SNP G -> T AC=1;AN=184;BQB=0.986141;DP=3510;DP4=1693,1693,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85921e-08;MQSB=0.875859;RPB=0.547213;SGB=0.715177;VDB=0.417606;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.4:29613230 chr04:029613230 0 W/29613230-29613230 FN2482 SNP T -> C AC=1;AN=200;BQB=0.997581;DP=4704;DP4=2372,1975,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.63553e-09;MQSB=0.962073;RPB=0.339994;SGB=47.4799;VDB=0.840515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.4:29620089 chr04:029620089 0 W/29620089-29620089 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.592989;DP=4961;DP4=2329,2328,17,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.01247e-21;MQSB=0.930958;RPB=0.36415;SGB=150.973;VDB=0.906143;EFF=INTRON(MODIFIER||||140|LOC_Os04g49670|protein_coding|CODING|LOC_Os04g49670.1|1|1) FN569-S.SNP.4:29637645 chr04:029637645 0 W/29637645-29637645 FN569-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN1262-S.SNP.4:29641694 chr04:029641694 0 W/29641694-29641694 FN1262-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN986-S.SNP.4:29644668 chr04:029644668 0 W/29644668-29644668 FN986-S Single Base Substitution C-A INTERGENIC HOMO SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN-379.SNP.4:29646275 chr04:029646275 0 W/29646275-29646275 FN-379 Single Base Substitution G-T INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN-379.SNP.4:29646276 chr04:029646276 0 W/29646276-29646276 FN-379 Single Base Substitution C-T INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN3452-S.SNP.4:29663511 chr04:029663511 0 W/29663511-29663511 FN3452-S SNP C -> G AC=1;AN=184;BQB=0.859425;DP=3438;DP4=1564,1756,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.94418e-13;MQSB=0.675065;RPB=0.800816;SGB=89.4385;VDB=0.254194;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.4:29670883 chr04:029670883 0 W/29670883-29670883 FN323-S Single Base Substitution T-C INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3580-S.SNP.4:29677997 chr04:029677997 0 W/29677997-29677997 FN3580-S SNP C -> A AC=2;AN=188;BQB=0.976278;DP=2396;DP4=1297,1043,13,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00375626;MQB=4.39254e-14;MQSB=0.809128;RPB=0.98325;SGB=71.4172;VDB=0.587917;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V857F|1097|LOC_Os04g49780|protein_coding|CODING|LOC_Os04g49780.1|1|1) FN2209-S.SNP.4:29680520 chr04:029680520 0 W/29680520-29680520 FN2209-S SNP T -> A AC=1;AN=190;BQB=1.81609e-05;DP=3579;DP4=1365,2015,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000279408;MQB=0.000146953;MQSB=0.588934;RPB=0.805827;SGB=23.6597;VDB=0.00993647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N16Y|1097|LOC_Os04g49780|protein_coding|CODING|LOC_Os04g49780.1|1|1) FN1426-S.SNP.4:29686753 chr04:029686753 0 W/29686753-29686753 FN1426-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g49790 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN_N1-213-1.SNP.4:29686905 chr04:029686905 0 W/29686905-29686905 FN_N1-213-1 Single Base Substitution G-A HET LOC_Os04g49790 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1379-S.SNP.4:29712006 chr04:029712006 0 W/29712006-29712006 FN1379-S Single Base Substitution G-A INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN4177-S.SNP.4:29720041 chr04:029720041 0 W/29720041-29720041 FN4177-S SNP T -> C AC=1;AN=170;BQB=0.998932;DP=2463;DP4=1062,1293,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.20194e-06;MQSB=0.317071;RPB=0.998638;SGB=43.4296;VDB=0.728489;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G144|1287|LOC_Os04g49860|protein_coding|CODING|LOC_Os04g49860.1|2|1) FN-390.SNP.4:29727263 chr04:029727263 0 W/29727263-29727263 FN-390 Single Base Substitution A-G INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN427-S.SNP.4:29736741 chr04:029736741 0 W/29736741-29736741 FN427-S Single Base Substitution G-A INTERGENIC HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN4175-S.SNP.4:29737585 chr04:029737585 0 W/29737585-29737585 FN4175-S SNP T -> C AC=1;AN=170;BQB=0.857;DP=2445;DP4=1166,1179,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02591e-08;MQSB=0.887214;RPB=0.168434;SGB=52.3148;VDB=0.320484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.4:29737760 chr04:029737760 0 W/29737760-29737760 FN3714-S SNP G -> C AC=2;AN=190;BQB=0.999999;DP=3305;DP4=1646,1427,38,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.06922e-38;MQSB=0.961346;RPB=0.585276;SGB=264.078;VDB=0.726526;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.4:29740116 chr04:029740116 0 W/29740116-29740116 FN579-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g49880 expressed protein SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN-259.SNP.4:29740187 chr04:029740187 0 W/29740187-29740187 FN-259 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g49880 expressed protein SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2675-S.SNP.4:29741067 chr04:029741067 0 W/29741067-29741067 FN2675-S SNP G -> A AC=1;AN=200;BQB=0.422655;DP=4624;DP4=2378,1956,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.94972e-16;MQSB=0.624237;RPB=0.27994;SGB=123.342;VDB=0.703827;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.4:29741379 chr04:029741379 0 W/29741379-29741379 FN4135-S SNP A -> T AC=1;AN=182;BQB=0.975686;DP=2818;DP4=1506,1215,12,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.52273e-13;MQSB=0.976409;RPB=0.727362;SGB=43.231;VDB=0.369399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.4:29757853 chr04:029757853 0 W/29757853-29757853 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.76484;DP=3914;DP4=1731,2139,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.3628e-13;MQSB=0.980177;RPB=0.633511;SGB=-7.39363;VDB=0.70937;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T486|1318|LOC_Os04g49900|protein_coding|CODING|LOC_Os04g49900.1|2|1) FN537-S.SNP.4:29758733 chr04:029758733 0 W/29758733-29758733 FN537-S Single Base Substitution A-G INTRON HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN570-S.SNP.4:29760879 chr04:029760879 0 W/29760879-29760879 FN570-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g49900 ABC transporter family protein, putative, expressed SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2218-S.SNP.4:29763956 chr04:029763956 0 W/29763956-29763956 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.792305;DP=4554;DP4=2348,1803,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60064e-10;MQSB=0.984184;RPB=0.99947;SGB=8.77275;VDB=0.301887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.4:29770041 chr04:029770041 0 W/29770041-29770041 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.956352;DP=2703;DP4=1247,1362,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.18973e-07;MQSB=0.682214;RPB=0.562917;SGB=28.9929;VDB=0.66123;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.4:29770891 chr04:029770891 0 W/29770891-29770891 FN-129 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3343-S.SNP.4:29775409 chr04:029775409 0 W/29775409-29775409 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.983986;DP=2541;DP4=1169,1284,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.99478e-06;MQSB=0.899432;RPB=0.999897;SGB=21.6609;VDB=0.119269;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.4:29781919 chr04:029781919 0 W/29781919-29781919 FN_552-1-1 Single Base Substitution C-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN918-S.SNP.4:29782101 chr04:029782101 0 W/29782101-29782101 FN918-S Single Base Substitution C-T INTRON HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3473-S.SNP.4:29784595 chr04:029784595 0 W/29784595-29784595 FN3473-S SNP G -> A AC=2;AN=184;BQB=0.481779;DP=2766;DP4=1284,1312,26,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46461e-19;MQSB=0.981612;RPB=0.366129;SGB=79.903;VDB=0.311707;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.4:29787407 chr04:029787407 0 W/29787407-29787407 FN3678-S SNP G -> A AC=1;AN=190;BQB=0.996632;DP=2214;DP4=1170,964,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34857e-07;MQSB=0.996341;RPB=0.908298;SGB=58.2031;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.4:29797963 chr04:029797963 0 W/29797963-29797963 FN793-S Single Base Substitution C-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN793-S.SNP.4:29797964 chr04:029797964 0 W/29797964-29797964 FN793-S Single Base Substitution G-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN512-S.SNP.4:29802420 chr04:029802420 0 W/29802420-29802420 FN512-S Single Base Substitution T-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2663-S.SNP.4:29809959 chr04:029809959 0 W/29809959-29809959 FN2663-S SNP G -> T AC=2;AN=200;BQB=0.975516;DP=4711;DP4=2452,1975,28,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.51823e-31;MQSB=0.768976;RPB=0.940426;SGB=173.661;VDB=0.0470098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A233S|421|LOC_Os04g49970|protein_coding|CODING|LOC_Os04g49970.1|1|1) FN2663-S.SNP.4:29809960 chr04:029809960 0 W/29809960-29809960 FN2663-S SNP C -> T AC=2;AN=200;BQB=0.850656;DP=4696;DP4=2513,1896,26,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12282e-29;MQSB=0.868982;RPB=0.964601;SGB=220.051;VDB=0.199349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A233V|421|LOC_Os04g49970|protein_coding|CODING|LOC_Os04g49970.1|1|1) FN1333-S.SNP.4:29818327 chr04:029818327 0 W/29818327-29818327 FN1333-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN888-S.SNP.4:29821272 chr04:029821272 0 W/29821272-29821272 FN888-S Single Base Substitution C-A INTRON HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1029-S.SNP.4:29823954 chr04:029823954 0 W/29823954-29823954 FN1029-S Single Base Substitution A-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-155.SNP.4:29826415 chr04:029826415 0 W/29826415-29826415 FN-155 Single Base Substitution G-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN933-S.SNP.4:29828208 chr04:029828208 0 W/29828208-29828208 FN933-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g50020 heavy-metal-associated domain-containing protein, putative, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3673-S.SNP.4:29841633 chr04:029841633 0 W/29841633-29841633 FN3673-S SNP T -> G AC=1;AN=190;BQB=0.166259;DP=2829;DP4=1424,1311,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41103e-06;MQSB=0.998387;RPB=0.265595;SGB=5.66499;VDB=0.136488;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.4:29845788 chr04:029845788 0 W/29845788-29845788 FN-311 Single Base Substitution C-G INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1332-S.SNP.4:29845788 chr04:029845788 0 W/29845788-29845788 FN1332-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN_N2-29a-1.SNP.4:29845788 chr04:029845788 0 W/29845788-29845788 FN_N2-29a-1 Single Base Substitution C-G Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN794-S.SNP.4:29855545 chr04:029855545 0 W/29855545-29855545 FN794-S Single Base Substitution C-G INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN2659-S.SNP.4:29856679 chr04:029856679 0 W/29856679-29856679 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.926008;DP=4771;DP4=2293,2172,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.5922e-10;MQSB=0.941165;RPB=0.833957;SGB=51.0851;VDB=0.979196;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.4:29864197 chr04:029864197 0 W/29864197-29864197 FN4184-S SNP G -> A AC=2;AN=170;BQB=0.938996;DP=2024;DP4=765,1042,5,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.34822e-09;MQSB=0.94528;RPB=0.723441;SGB=34.5398;VDB=0.847357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.4:29865750 chr04:029865750 0 W/29865750-29865750 FN4100-S SNP A -> C AC=1;AN=182;BQB=0.999601;DP=2998;DP4=1307,1616,13,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.67431e-13;MQSB=0.958317;RPB=0.91231;SGB=84.7091;VDB=0.592857;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.4:29870374 chr04:029870374 0 W/29870374-29870374 FN838-S Single Base Substitution C-T INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3725-S.SNP.4:29881808 chr04:029881808 0 W/29881808-29881808 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.691752;DP=2730;DP4=1452,1179,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.14352e-12;MQSB=0.367065;RPB=0.564193;SGB=57.4238;VDB=0.0285523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.4:29881810 chr04:029881810 0 W/29881810-29881810 FN3725-S SNP A -> G AC=1;AN=190;BQB=0.967742;DP=2733;DP4=1468,1147,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04722e-11;MQSB=0.456771;RPB=0.763338;SGB=60.9777;VDB=0.0547162;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.4:29881865 chr04:029881865 0 W/29881865-29881865 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.962293;DP=3096;DP4=1692,1325,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.97185e-07;MQSB=0.574756;RPB=0.5768;SGB=39.6007;VDB=0.477569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.4:29884868 chr04:029884868 0 W/29884868-29884868 FN2559-S SNP A -> G AC=2;AN=198;BQB=0.995424;DP=4047;DP4=1970,1910,10,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.85311e-13;MQSB=0.553906;RPB=0.719795;SGB=90.9049;VDB=0.777572;EFF=START_GAINED(LOW||||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1),UTR_5_PRIME(MODIFIER||41||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1) FN3575-S.SNP.4:29884868 chr04:029884868 0 W/29884868-29884868 FN3575-S SNP A -> G AC=1;AN=188;BQB=0.958512;DP=3268;DP4=1246,1863,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.22564e-15;MQSB=0.962073;RPB=0.99994;SGB=51.5091;VDB=0.704308;EFF=START_GAINED(LOW||||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1),UTR_5_PRIME(MODIFIER||41||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1) FN3902-S.SNP.4:29884868 chr04:029884868 0 W/29884868-29884868 FN3902-S SNP A -> G AC=2;AN=158;BQB=1;DP=2660;DP4=1136,1329,12,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.97282e-12;MQSB=0.973295;RPB=0.955596;SGB=99.5005;VDB=0.124202;EFF=START_GAINED(LOW||||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1),UTR_5_PRIME(MODIFIER||41||383|LOC_Os04g50100|protein_coding|CODING|LOC_Os04g50100.1|1|1) FN2621-S.SNP.4:29904488 chr04:029904488 0 W/29904488-29904488 FN2621-S SNP T -> C AC=2;AN=200;BQB=0.292965;DP=4886;DP4=2276,2252,24,27;HOB=0.0198;ICB=0.495051;MQ=35;MQ0F=0.125461;MQB=0.470371;MQSB=7.80812e-25;RPB=0.0327099;SGB=173.661;VDB=0.170027;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I417|492|LOC_Os04g50140|protein_coding|CODING|LOC_Os04g50140.1|2|1) FN2106-S.SNP.4:29928447 chr04:029928447 0 W/29928447-29928447 FN2106-S SNP T -> A AC=2;AN=168;BQB=0.337247;DP=3151;DP4=1638,1447,20,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.98474e-17;MQSB=0.181434;RPB=0.914161;SGB=80.5243;VDB=0.798351;EFF=INTRON(MODIFIER||||322|LOC_Os04g50164|protein_coding|CODING|LOC_Os04g50164.1|2|1) FN2558-S.SNP.4:29932146 chr04:029932146 0 W/29932146-29932146 FN2558-S SNP C -> T AC=1;AN=198;BQB=0.594808;DP=3564;DP4=1694,1730,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.18634e-05;MQSB=0.999993;RPB=0.954722;SGB=35.7638;VDB=0.857718;EFF=INTRON(MODIFIER||||523|LOC_Os04g50168|protein_coding|CODING|LOC_Os04g50168.1|1|1) FN2439.SNP.4:29932189 chr04:029932189 0 W/29932189-29932189 FN2439 SNP C -> T AC=1;AN=200;BQB=0.238935;DP=3770;DP4=1774,1781,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18853e-07;MQSB=0.261746;RPB=0.813274;SGB=40.2696;VDB=0.790183;EFF=INTRON(MODIFIER||||523|LOC_Os04g50168|protein_coding|CODING|LOC_Os04g50168.1|1|1) FN3330-S.SNP.4:29933083 chr04:029933083 0 W/29933083-29933083 FN3330-S SNP C -> T AC=1;AN=184;BQB=0.999991;DP=2876;DP4=1426,1352,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.88962e-08;MQSB=0.485931;RPB=0.567703;SGB=42.7914;VDB=0.906319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.4:29933990 chr04:029933990 0 W/29933990-29933990 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.957924;DP=4745;DP4=2334,2127,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.64624e-14;MQSB=0.794886;RPB=0.143779;SGB=47.7211;VDB=0.0409337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R543S|784|LOC_Os04g50172|protein_coding|CODING|LOC_Os04g50172.1|5|1) FN2729-S.SNP.4:29933991 chr04:029933991 0 W/29933991-29933991 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.999458;DP=4737;DP4=2383,2101,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.60659e-15;MQSB=0.82566;RPB=0.254055;SGB=100.316;VDB=0.0661592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R543I|784|LOC_Os04g50172|protein_coding|CODING|LOC_Os04g50172.1|5|1) FN1626-S.SNP.4:29937556 chr04:029937556 0 W/29937556-29937556 FN1626-S SNP T -> G AC=1;AN=188;BQB=0.860202;DP=2349;DP4=1241,1069,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0246914;MQB=0.00672154;MQSB=0.0373086;RPB=0.991869;SGB=8.62479;VDB=0.484297;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M117L|784|LOC_Os04g50172|protein_coding|CODING|LOC_Os04g50172.1|1|1) FN2593-S.SNP.4:29937697 chr04:029937697 0 W/29937697-29937697 FN2593-S SNP T -> G AC=1;AN=198;BQB=0.965845;DP=3812;DP4=2118,1493,20,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0044596;MQB=1.07794e-11;MQSB=0.791553;RPB=0.572484;SGB=118.476;VDB=0.329522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Cgt|S70R|784|LOC_Os04g50172|protein_coding|CODING|LOC_Os04g50172.1|1|1) FN3709-S.SNP.4:29940741 chr04:029940741 0 W/29940741-29940741 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.705618;DP=2677;DP4=1338,1144,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20118e-07;MQSB=0.996568;RPB=0.881754;SGB=-53.0886;VDB=0.536579;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.4:29948460 chr04:029948460 0 W/29948460-29948460 FN-303 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g50192 retrotransposon protein, putative, LINE subclass, expressed SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. W138-2-1.SNP.4:29949417 chr04:029949417 0 W/29949417-29949417 W138-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g50192 retrotransposon protein, putative, LINE subclass, expressed SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2439.SNP.4:29960342 chr04:029960342 0 W/29960342-29960342 FN2439 SNP T -> A AC=1;AN=200;BQB=0.99845;DP=4803;DP4=2164,2391,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.68293e-09;MQSB=0.846239;RPB=0.936227;SGB=47.4799;VDB=0.117646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.4:29973398 chr04:029973398 0 W/29973398-29973398 FN1545-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os04g50212 expressed protein SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2583-S.SNP.4:29982430 chr04:029982430 0 W/29982430-29982430 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.963222;DP=5240;DP4=2543,2382,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.76351e-13;MQSB=0.932189;RPB=0.222743;SGB=83.5316;VDB=0.291957;EFF=INTRON(MODIFIER||||891|LOC_Os04g50660|protein_coding|CODING|LOC_Os04g50660.1|13|1) FN713-S.SNP.4:29988826 chr04:029988826 0 W/29988826-29988826 FN713-S Single Base Substitution G-T INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2689-S.SNP.4:29989942 chr04:029989942 0 W/29989942-29989942 FN2689-S SNP C -> G AC=1;AN=200;BQB=0.99369;DP=4718;DP4=2518,1926,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000211954;MQB=2.59729e-08;MQSB=0.731383;RPB=0.868998;SGB=21.6694;VDB=0.0956936;EFF=INTRON(MODIFIER||||307|LOC_Os04g50670|protein_coding|CODING|LOC_Os04g50670.1|2|1) FN1114-S.SNP.4:29993243 chr04:029993243 0 W/29993243-29993243 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1702-S.SNP.4:29994212 chr04:029994212 0 W/29994212-29994212 FN1702-S SNP T -> G AC=1;AN=188;BQB=0.44897;DP=4079;DP4=2075,1970,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.6986e-11;MQSB=0.955405;RPB=0.960741;SGB=-11.74;VDB=0.621917;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.4:29994423 chr04:029994423 0 W/29994423-29994423 FN4231-S SNP C -> A AC=1;AN=170;BQB=0.348892;DP=2359;DP4=1180,1103,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00375281;MQSB=0.96515;RPB=0.835997;SGB=34.5445;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.4:29998927 chr04:029998927 0 W/29998927-29998927 FN2122-S SNP C -> T AC=2;AN=168;BQB=0.99908;DP=3750;DP4=2105,1512,33,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.37565e-21;MQSB=0.870147;RPB=0.893844;SGB=-428.545;VDB=0.250115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.4:30007425 chr04:030007425 0 W/30007425-30007425 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.0397658;DP=3155;DP4=1937,1185,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.06201e-05;MQSB=0.2786;RPB=0.543538;SGB=-15.3725;VDB=0.461507;EFF=INTRON(MODIFIER||||629|LOC_Os04g50720|protein_coding|CODING|LOC_Os04g50720.1|1|1) FN2134-S.SNP.4:30018834 chr04:030018834 0 W/30018834-30018834 FN2134-S SNP A -> T AC=1;AN=168;BQB=0.0111675;DP=3532;DP4=1787,1690,20,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.00446e-20;MQSB=0.990147;RPB=0.987842;SGB=-289.151;VDB=0.729678;EFF=INTRON(MODIFIER||||291|LOC_Os04g50740|protein_coding|CODING|LOC_Os04g50740.1|3|1) FN2134-S.SNP.4:30018836 chr04:030018836 0 W/30018836-30018836 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.0345582;DP=3545;DP4=1801,1697,22,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.69132e-19;MQSB=0.995418;RPB=0.528584;SGB=-136.6;VDB=0.619399;EFF=INTRON(MODIFIER||||291|LOC_Os04g50740|protein_coding|CODING|LOC_Os04g50740.1|3|1) FN1336-S.SNP.4:30029340 chr04:030029340 0 W/30029340-30029340 FN1336-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g50770 MYB family transcription factor, putative, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN-325.SNP.4:30040177 chr04:030040177 0 W/30040177-30040177 FN-325 Single Base Substitution G-A INTERGENIC HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1206-S.SNP.4:30040177 chr04:030040177 0 W/30040177-30040177 FN1206-S Single Base Substitution G-A INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN424-S.SNP.4:30040177 chr04:030040177 0 W/30040177-30040177 FN424-S Single Base Substitution G-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN395-S.SNP.4:30048319 chr04:030048319 0 W/30048319-30048319 FN395-S Single Base Substitution T-C INTRON HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-359.SNP.4:30053645 chr04:030053645 0 W/30053645-30053645 FN-359 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g50800 expressed protein SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN4174-S.SNP.4:30064160 chr04:030064160 0 W/30064160-30064160 FN4174-S SNP C -> A AC=1;AN=170;BQB=0.95289;DP=2695;DP4=1185,1444,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3459e-05;MQSB=0.995788;RPB=0.590806;SGB=30.1021;VDB=0.674881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A427E|737|LOC_Os04g50820|protein_coding|CODING|LOC_Os04g50820.1|5|1) FN3388-S.SNP.4:30068275 chr04:030068275 0 W/30068275-30068275 FN3388-S SNP G -> A AC=2;AN=184;BQB=0.999853;DP=3484;DP4=1602,1739,20,14;HOB=0.0215028;ICB=0.494625;MQ=32;MQ0F=0.0795063;MQB=0.513224;MQSB=0.995335;RPB=0.927486;SGB=109.705;VDB=0.853663;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A530V|1189|LOC_Os04g50830|protein_coding|CODING|LOC_Os04g50830.1|1|1) FN3865-S.SNP.4:30076207 chr04:030076207 0 W/30076207-30076207 FN3865-S SNP G -> A AC=1;AN=158;BQB=0.873193;DP=2805;DP4=1227,1482,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.40752e-07;MQSB=0.969959;RPB=0.98415;SGB=55.806;VDB=0.903969;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G264S|416|LOC_Os04g50850|protein_coding|CODING|LOC_Os04g50850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G264S|489|LOC_Os04g50850|protein_coding|CODING|LOC_Os04g50850.1|1|1) FN2663-S.SNP.4:30077013 chr04:030077013 0 W/30077013-30077013 FN2663-S SNP A -> G AC=1;AN=200;BQB=0.805006;DP=4882;DP4=2445,2266,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31844e-09;MQSB=0.9958;RPB=0.813141;SGB=-14.9257;VDB=0.351174;EFF=UTR_3_PRIME(MODIFIER||277||416|LOC_Os04g50850|protein_coding|CODING|LOC_Os04g50850.2|2|1),UTR_3_PRIME(MODIFIER||126||489|LOC_Os04g50850|protein_coding|CODING|LOC_Os04g50850.1|1|1) FN796-S.SNP.4:30091908 chr04:030091908 0 W/30091908-30091908 FN796-S Single Base Substitution T-A INTRON HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2271-S.SNP.4:30121202 chr04:030121202 0 W/30121202-30121202 FN2271-S SNP T -> A AC=1;AN=190;BQB=0.974346;DP=4542;DP4=2174,2055,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34627e-14;MQSB=0.990377;RPB=0.822297;SGB=64.5217;VDB=0.082342;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.4:30122739 chr04:030122739 0 W/30122739-30122739 FN4206-S SNP C -> T AC=2;AN=170;BQB=0.811024;DP=2929;DP4=1384,1460,11,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.83583e-14;MQSB=0.885586;RPB=0.899142;SGB=105.627;VDB=0.877136;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.4:30125546 chr04:030125546 0 W/30125546-30125546 FN-141 Single Base Substitution G-T INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3591-S.SNP.4:30128951 chr04:030128951 0 W/30128951-30128951 FN3591-S SNP T -> A AC=2;AN=188;BQB=0.94204;DP=2485;DP4=1184,1202,16,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.62956e-16;MQSB=0.839756;RPB=0.963771;SGB=82.0471;VDB=0.519462;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.4:30128952 chr04:030128952 0 W/30128952-30128952 FN-195 Single Base Substitution A-T INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1213-S.SNP.4:30138716 chr04:030138716 0 W/30138716-30138716 FN1213-S Single Base Substitution C-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2725-S.SNP.4:30138716 chr04:030138716 0 W/30138716-30138716 FN2725-S SNP C -> A AC=1;AN=200;BQB=0.651897;DP=4667;DP4=1946,2411,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.08415e-06;MQSB=0.625172;RPB=0.21784;SGB=49.6594;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.4:30148952 chr04:030148952 0 W/30148952-30148952 FN1650-S Single Base Substitution T-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN-84.SNP.4:30150290 chr04:030150290 0 W/30150290-30150290 FN-84 Single Base Substitution A-T INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN2558-S.SNP.4:30151336 chr04:030151336 0 W/30151336-30151336 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.931505;DP=3653;DP4=1595,1793,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000273748;MQB=1.94685e-10;MQSB=0.977796;RPB=0.554481;SGB=54.5295;VDB=0.663613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.4:30153474 chr04:030153474 0 W/30153474-30153474 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.897857;DP=4483;DP4=2118,2149,7,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.59185e-05;MQSB=0.420751;RPB=0.600646;SGB=5.98864;VDB=0.116387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.4:30157696 chr04:030157696 0 W/30157696-30157696 FN3691-S SNP G -> T AC=1;AN=190;BQB=0.941371;DP=2952;DP4=1194,1627,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06986e-06;MQSB=0.986834;RPB=0.935235;SGB=39.6545;VDB=0.468537;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L169|570|LOC_Os04g50940|protein_coding|CODING|LOC_Os04g50940.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L174|575|LOC_Os04g50940|protein_coding|CODING|LOC_Os04g50940.1|2|1) FN2351.SNP.4:30162639 chr04:030162639 0 W/30162639-30162639 FN2351 SNP T -> C AC=1;AN=192;BQB=0.99995;DP=4802;DP4=2463,2060,16,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.38415e-12;MQSB=0.173339;RPB=0.996996;SGB=44.3;VDB=0.142885;EFF=INTRON(MODIFIER||||593|LOC_Os04g50950|protein_coding|CODING|LOC_Os04g50950.1|2|1) FN1571-S.SNP.4:30170413 chr04:030170413 0 W/30170413-30170413 FN1571-S Single Base Substitution C-T INTRON HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2192-S.SNP.4:30176057 chr04:030176057 0 W/30176057-30176057 FN2192-S SNP T -> C AC=2;AN=190;BQB=0.109;DP=5154;DP4=2370,2453,22,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.27292e-25;MQSB=0.999916;RPB=0.51244;SGB=217.589;VDB=0.862119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.4:30177252 chr04:030177252 0 W/30177252-30177252 FN2573-S SNP C -> A AC=1;AN=198;BQB=0.859557;DP=4299;DP4=2015,2084,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.12932e-10;MQSB=0.791597;RPB=0.97965;SGB=29.3443;VDB=0.379816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C125F|130|LOC_Os04g50980|protein_coding|CODING|LOC_Os04g50980.1|3|1) FN3376-S.SNP.4:30190229 chr04:030190229 0 W/30190229-30190229 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.612857;DP=2779;DP4=1331,1306,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.17791e-10;MQSB=0.997659;RPB=0.948121;SGB=18.9766;VDB=0.36848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.4:30196718 chr04:030196718 0 W/30196718-30196718 FN3593-S SNP C -> T AC=1;AN=190;BQB=0.577748;DP=2943;DP4=1542,1315,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.40008e-05;MQSB=0.960449;RPB=0.978466;SGB=36.1006;VDB=0.735684;EFF=UTR_3_PRIME(MODIFIER||10||99|LOC_Os04g51009|protein_coding|CODING|LOC_Os04g51009.1|1|1),UTR_3_PRIME(MODIFIER||10||99|LOC_Os04g51009|protein_coding|CODING|LOC_Os04g51009.2|2|1) FN2293.SNP.4:30200489 chr04:030200489 0 W/30200489-30200489 FN2293 SNP G -> A AC=2;AN=192;BQB=0.80957;DP=4548;DP4=2068,2204,15,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.34199e-17;MQSB=0.906354;RPB=0.994699;SGB=103.938;VDB=0.65905;EFF=UTR_5_PRIME(MODIFIER||3462||99|LOC_Os04g51009|protein_coding|CODING|LOC_Os04g51009.1|1|1),INTRON(MODIFIER||||99|LOC_Os04g51009|protein_coding|CODING|LOC_Os04g51009.2|1|1) FN-90.SNP.4:30201589 chr04:030201589 0 W/30201589-30201589 FN-90 Single Base Substitution G-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-86.SNP.4:30216291 chr04:030216291 0 W/30216291-30216291 FN-86 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g51040 OsWAK50 - OsWAK receptor-like protein kinase, expressed SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN-189.SNP.4:30221149 chr04:030221149 0 W/30221149-30221149 FN-189 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g51050 OsWAK53b - OsWAK receptor-like protein kinase, expressed SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-52.SNP.4:30229311 chr04:030229311 0 W/30229311-30229311 FN-52 Single Base Substitution A-G INTRON HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN2709-S.SNP.4:30230349 chr04:030230349 0 W/30230349-30230349 FN2709-S SNP C -> A AC=1;AN=200;BQB=0.211992;DP=4324;DP4=1976,2017,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000231267;MQB=0.00299952;MQSB=0.965928;RPB=0.912174;SGB=31.2392;VDB=0.666245;EFF=START_GAINED(LOW||||803|LOC_Os04g51060|protein_coding|CODING|LOC_Os04g51060.1|1|1),UTR_5_PRIME(MODIFIER||429||803|LOC_Os04g51060|protein_coding|CODING|LOC_Os04g51060.1|1|1) FN-92.SNP.4:30233198 chr04:030233198 0 W/30233198-30233198 FN-92 Single Base Substitution G-A INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-298.SNP.4:30233694 chr04:030233694 0 W/30233694-30233694 FN-298 Single Base Substitution A-G INTERGENIC HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2334.SNP.4:30244248 chr04:030244248 0 W/30244248-30244248 FN2334 SNP A -> G AC=1;AN=192;BQB=0.646381;DP=5175;DP4=2256,2410,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.94032e-10;MQSB=0.588377;RPB=0.783364;SGB=31.4783;VDB=0.423372;EFF=INTRON(MODIFIER||||336|LOC_Os04g51080|protein_coding|CODING|LOC_Os04g51080.1|4|1) FN2481.SNP.4:30255785 chr04:030255785 0 W/30255785-30255785 FN2481 SNP C -> T AC=2;AN=200;BQB=0.964638;DP=5008;DP4=2302,2354,10,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.86848e-18;MQSB=0.895468;RPB=0.0319788;SGB=28.752;VDB=0.0446059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P170S|1738|LOC_Os04g51090|protein_coding|CODING|LOC_Os04g51090.1|9|1) FN2493.SNP.4:30261887 chr04:030261887 0 W/30261887-30261887 FN2493 SNP G -> T AC=1;AN=198;BQB=0.763675;DP=4676;DP4=2252,2176,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.62057e-11;MQSB=0.769003;RPB=0.884;SGB=72.6852;VDB=0.902699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C1350F|1738|LOC_Os04g51090|protein_coding|CODING|LOC_Os04g51090.1|14|1) FN724-S.SNP.4:30274740 chr04:030274740 0 W/30274740-30274740 FN724-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN454-S.SNP.4:30277445 chr04:030277445 0 W/30277445-30277445 FN454-S Single Base Substitution G-A INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN2681-S.SNP.4:30278607 chr04:030278607 0 W/30278607-30278607 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.941817;DP=4662;DP4=2115,2204,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86531e-14;MQSB=0.997633;RPB=0.911856;SGB=47.7211;VDB=0.713234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.4:30279036 chr04:030279036 0 W/30279036-30279036 FN3056-S SNP C -> T AC=2;AN=184;BQB=0.967838;DP=2612;DP4=1280,1221,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.81392e-15;MQSB=0.996981;RPB=0.290638;SGB=121.091;VDB=0.12878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.4:30284192 chr04:030284192 0 W/30284192-30284192 FN2359 SNP T -> A AC=2;AN=192;BQB=0.695711;DP=5377;DP4=2643,2386,22,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.42209e-23;MQSB=0.98032;RPB=0.0264059;SGB=160.968;VDB=0.29517;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D90E|132|LOC_Os04g51130|protein_coding|CODING|LOC_Os04g51130.1|4|1) FN1292-S.SNP.4:30285354 chr04:030285354 0 W/30285354-30285354 FN1292-S Single Base Substitution T-A SPLICE_SITE_REGION HOMO SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2658-S.SNP.4:30285421 chr04:030285421 0 W/30285421-30285421 FN2658-S SNP G -> A AC=2;AN=200;BQB=0.768733;DP=5238;DP4=2373,2621,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32744e-28;MQSB=0.979862;RPB=0.89077;SGB=110.245;VDB=0.471439;EFF=INTRON(MODIFIER||||130|LOC_Os04g51140|protein_coding|CODING|LOC_Os04g51140.1|2|1),INTRON(MODIFIER||||208|LOC_Os04g51140|protein_coding|CODING|LOC_Os04g51140.2|3|1) FN3757-S.SNP.4:30287438 chr04:030287438 0 W/30287438-30287438 FN3757-S SNP T -> C AC=1;AN=190;BQB=0.828376;DP=2572;DP4=1424,1017,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03193e-09;MQSB=0.642665;RPB=0.709378;SGB=64.5316;VDB=0.0933903;EFF=UTR_3_PRIME(MODIFIER||128||332|LOC_Os04g51150|protein_coding|CODING|LOC_Os04g51150.1|4|1) FN321-S.SNP.4:30289705 chr04:030289705 0 W/30289705-30289705 FN321-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g51150 transposon protein, putative, unclassified, expressed SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1243-S.SNP.4:30296832 chr04:030296832 0 W/30296832-30296832 FN1243-S Single Base Substitution T-G INTRON HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3558-S.SNP.4:30299053 chr04:030299053 0 W/30299053-30299053 FN3558-S SNP T -> G AC=2;AN=188;BQB=0.898896;DP=3723;DP4=1821,1765,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.43124e-18;MQSB=0.997552;RPB=0.620394;SGB=135.302;VDB=0.733505;EFF=INTRON(MODIFIER||||213|LOC_Os04g51172|protein_coding|CODING|LOC_Os04g51172.1|4|1) FN-123.SNP.4:30309192 chr04:030309192 0 W/30309192-30309192 FN-123 Single Base Substitution C-T INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN523-S.SNP.4:30312438 chr04:030312438 0 W/30312438-30312438 FN523-S Single Base Substitution C-T INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.4:30312438 chr04:030312438 0 W/30312438-30312438 FN532-S Single Base Substitution C-T INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3500-S.SNP.4:30312853 chr04:030312853 0 W/30312853-30312853 FN3500-S SNP A -> G AC=1;AN=188;BQB=0.906874;DP=2624;DP4=1218,1348,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000195458;MQSB=0.941391;RPB=0.996185;SGB=18.2682;VDB=0.109528;EFF=UTR_3_PRIME(MODIFIER||542||347|LOC_Os04g51180|protein_coding|CODING|LOC_Os04g51180.2|8|1),INTRON(MODIFIER||||468|LOC_Os04g51180|protein_coding|CODING|LOC_Os04g51180.1|10|1) FN2162-S.SNP.4:30316830 chr04:030316830 0 W/30316830-30316830 FN2162-S SNP C -> G AC=1;AN=168;BQB=0.00171194;DP=2075;DP4=1164,832,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.04182e-07;MQSB=0.986048;RPB=0.955112;SGB=8.48315;VDB=0.227814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-193.SNP.4:30323370 chr04:030323370 0 W/30323370-30323370 FN-193 Single Base Substitution G-T INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2192-S.SNP.4:30323560 chr04:030323560 0 W/30323560-30323560 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.931801;DP=5040;DP4=2246,2531,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92414e-11;MQSB=0.873956;RPB=0.989144;SGB=33.8752;VDB=0.615901;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.4:30325446 chr04:030325446 0 W/30325446-30325446 FN2325 SNP G -> A AC=2;AN=192;BQB=0.997122;DP=4682;DP4=1929,2520,16,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.27723e-17;MQSB=0.429732;RPB=0.194406;SGB=118.196;VDB=0.674209;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.4:30332812 chr04:030332812 0 W/30332812-30332812 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.987847;DP=2790;DP4=1480,1247,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.59281e-08;MQSB=0.962002;RPB=0.601229;SGB=17.4413;VDB=0.0600709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.4:30336018 chr04:030336018 0 W/30336018-30336018 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.456236;DP=3799;DP4=1665,1914,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.114767;MQB=0.0204294;MQSB=5.40625e-27;RPB=0.187983;SGB=77.1196;VDB=0.416376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.4:30349549 chr04:030349549 0 W/30349549-30349549 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.785452;DP=4913;DP4=2262,2348,25,22;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0274781;MQB=0.817325;MQSB=5.7254e-09;RPB=0.969252;SGB=210.84;VDB=0.958591;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A41|311|LOC_Os04g51220|protein_coding|CODING|LOC_Os04g51220.1|1|1) FN531-S.SNP.4:30352987 chr04:030352987 0 W/30352987-30352987 FN531-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g51230 retrotransposon protein, putative, unclassified, expressed SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN2675-S.SNP.4:30356034 chr04:030356034 0 W/30356034-30356034 FN2675-S SNP T -> C AC=1;AN=200;BQB=0.69534;DP=4855;DP4=2019,2556,17,3;HOB=5e-05;ICB=0.0001005;MQ=12;MQ0F=0.494336;MQB=0.0234379;MQSB=0;RPB=0.0806736;SGB=37.3004;VDB=0.425347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N367S|2027|LOC_Os04g51230|protein_coding|CODING|LOC_Os04g51230.1|1|1) FN_N1-169-1.SNP.4:30362163 chr04:030362163 0 W/30362163-30362163 FN_N1-169-1 Single Base Substitution G-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN_N1-169-1.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 FN_N1-169-1 Single Base Substitution C-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-2.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-2 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-3 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-4 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-5 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-6 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-7 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-8 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.4:30362164 chr04:030362164 0 W/30362164-30362164 N1-169-9 Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN3332-S.SNP.4:30368879 chr04:030368879 0 W/30368879-30368879 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.93296;DP=2956;DP4=2244,533,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000338295;MQB=6.15071e-06;MQSB=0.00423557;RPB=0.812287;SGB=53.2642;VDB=0.985479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.4:30387809 chr04:030387809 0 W/30387809-30387809 FN1426-S Single Base Substitution T-C INTRON HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2781-S.SNP.4:30391443 chr04:030391443 0 W/30391443-30391443 FN2781-S SNP G -> T AC=1;AN=198;BQB=0.911274;DP=4423;DP4=2261,1740,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.13592e-15;MQSB=0.298256;RPB=0.987363;SGB=-9.07482;VDB=0.0630674;EFF=INTERGENIC(MODIFIER||||||||||1) FN1590-S.SNP.4:30401417 chr04:030401417 0 W/30401417-30401417 FN1590-S Single Base Substitution G-C INTRON HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3833-S.SNP.4:30403704 chr04:030403704 0 W/30403704-30403704 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.822196;DP=2012;DP4=867,813,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.06697e-06;MQSB=0.897698;RPB=0.579231;SGB=26.2136;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.4:30412076 chr04:030412076 0 W/30412076-30412076 FN868-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g51350 pentatricopeptide, putative, expressed SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN868-S.SNP.4:30412077 chr04:030412077 0 W/30412077-30412077 FN868-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g51350 pentatricopeptide, putative, expressed SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN4275-S.SNP.4:30423913 chr04:030423913 0 W/30423913-30423913 FN4275-S SNP A -> T AC=2;AN=170;BQB=0.751456;DP=2385;DP4=1058,1071,18,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.25784e-11;MQSB=0.608579;RPB=0.68215;SGB=20.2016;VDB=0.787068;EFF=UTR_5_PRIME(MODIFIER||403||924|LOC_Os04g51370|protein_coding|CODING|LOC_Os04g51370.1|1|1),UTR_5_PRIME(MODIFIER||403||883|LOC_Os04g51370|protein_coding|CODING|LOC_Os04g51370.2|1|1) FN3831-S.SNP.4:30424506 chr04:030424506 0 W/30424506-30424506 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.911549;DP=2840;DP4=1325,1406,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.63087e-10;MQSB=0.827067;RPB=0.666128;SGB=53.8699;VDB=0.647802;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.4:30425406 chr04:030425406 0 W/30425406-30425406 FN4078-S SNP A -> C AC=1;AN=182;BQB=0.271971;DP=2560;DP4=1178,1203,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.16717e-05;MQSB=0.733942;RPB=0.64662;SGB=66.6657;VDB=0.188529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.4:30427457 chr04:030427457 0 W/30427457-30427457 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.781982;DP=4907;DP4=2426,2200,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1253e-08;MQSB=0.996046;RPB=0.427538;SGB=24.2746;VDB=0.207007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.4:30427724 chr04:030427724 0 W/30427724-30427724 FN3846-S SNP A -> T AC=1;AN=190;BQB=0.954428;DP=2573;DP4=1257,1170,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72592e-07;MQSB=0.999801;RPB=0.779918;SGB=62.7569;VDB=0.406539;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.4:30428090 chr04:030428090 0 W/30428090-30428090 FN436-S Single Base Substitution C-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN919-S.SNP.4:30429484 chr04:030429484 0 W/30429484-30429484 FN919-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os04g51380 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN1757-S.SNP.4:30436300 chr04:030436300 0 W/30436300-30436300 FN1757-S SNP T -> G AC=1;AN=188;BQB=0.990078;DP=4262;DP4=2019,2204,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00882e-13;MQSB=0.979985;RPB=0.193717;SGB=22.5144;VDB=0.0136339;EFF=INTRON(MODIFIER||||325|LOC_Os04g51390|protein_coding|CODING|LOC_Os04g51390.1|5|1),INTRON(MODIFIER||||325|LOC_Os04g51390|protein_coding|CODING|LOC_Os04g51390.2|5|1) FN2114-S.SNP.4:30436745 chr04:030436745 0 W/30436745-30436745 FN2114-S SNP G -> T AC=2;AN=168;BQB=0.973406;DP=4121;DP4=1824,2233,16,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.1567e-17;MQSB=0.941934;RPB=0.882011;SGB=-6.32537;VDB=0.460339;EFF=INTRON(MODIFIER||||325|LOC_Os04g51390|protein_coding|CODING|LOC_Os04g51390.1|5|1),INTRON(MODIFIER||||325|LOC_Os04g51390|protein_coding|CODING|LOC_Os04g51390.2|5|1) FN2196-S.SNP.4:30452082 chr04:030452082 0 W/30452082-30452082 FN2196-S SNP T -> C AC=1;AN=190;BQB=0.964638;DP=5157;DP4=2239,2353,16,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57981e-19;MQSB=0.469021;RPB=0.990127;SGB=82.3989;VDB=0.0961117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.4:30454288 chr04:030454288 0 W/30454288-30454288 FN3709-S SNP T -> A AC=1;AN=190;BQB=0.642817;DP=2680;DP4=1164,1335,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.84607e-09;MQSB=0.214634;RPB=0.897084;SGB=90.0802;VDB=0.552871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.4:30454485 chr04:030454485 0 W/30454485-30454485 FN3790-S SNP G -> T AC=2;AN=190;BQB=0.859067;DP=2791;DP4=1462,1198,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.5934e-11;MQSB=0.907466;RPB=0.871087;SGB=71.8647;VDB=0.694485;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S203|208|LOC_Os04g51420|protein_coding|CODING|LOC_Os04g51420.1|3|1) 822-5-6.SNP.4:30458557 chr04:030458557 0 W/30458557-30458557 822-5-6 Single Base Substitution A-C SYNONYMOUS_CODING Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2383.SNP.4:30463901 chr04:030463901 0 W/30463901-30463901 FN2383 SNP A -> T AC=1;AN=192;BQB=0.985325;DP=5027;DP4=2530,2211,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.41528e-08;MQSB=0.727043;RPB=0.82969;SGB=62.9035;VDB=0.479047;EFF=UTR_3_PRIME(MODIFIER||249||946|LOC_Os04g51440|protein_coding|CODING|LOC_Os04g51440.1|23|1),UTR_3_PRIME(MODIFIER||249||946|LOC_Os04g51440|protein_coding|CODING|LOC_Os04g51440.2|22|1) FN318-S.SNP.4:30468888 chr04:030468888 0 W/30468888-30468888 FN318-S Single Base Substitution A-G INTRON HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN-81.SNP.4:30470646 chr04:030470646 0 W/30470646-30470646 FN-81 Single Base Substitution G-C INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1372-S.SNP.4:30488502 chr04:030488502 0 W/30488502-30488502 FN1372-S Single Base Substitution C-T INTRON HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN3286-S.SNP.4:30496771 chr04:030496771 0 W/30496771-30496771 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.846323;DP=2939;DP4=1727,1086,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.86029e-12;MQSB=0.963713;RPB=0.999946;SGB=80.3949;VDB=0.122605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.4:30513726 chr04:030513726 0 W/30513726-30513726 FN3849-S SNP T -> A AC=1;AN=158;BQB=0.962664;DP=1900;DP4=939,900,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62264e-05;MQSB=0.998173;RPB=0.942398;SGB=38.3284;VDB=0.940371;EFF=UTR_5_PRIME(MODIFIER||1911||149|LOC_Os04g51500|protein_coding|CODING|LOC_Os04g51500.1|1|1) FN1411-S.SNP.4:30519808 chr04:030519808 0 W/30519808-30519808 FN1411-S Single Base Substitution G-A INTRON HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2261-S.SNP.4:30520708 chr04:030520708 0 W/30520708-30520708 FN2261-S SNP A -> T AC=1;AN=190;BQB=0.818621;DP=3991;DP4=1654,1650,25,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000250564;MQB=5.54549e-22;MQSB=0.600101;RPB=0.450587;SGB=149.825;VDB=0.573981;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M272K|321|LOC_Os04g51520|protein_coding|CODING|LOC_Os04g51520.1|3|1) FN1192-S.SNP.4:30530259 chr04:030530259 0 W/30530259-30530259 FN1192-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g51540 retrotransposon protein, putative, unclassified, expressed SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN-101.SNP.4:30535883 chr04:030535883 0 W/30535883-30535883 FN-101 Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1024-S.SNP.4:30540439 chr04:030540439 0 W/30540439-30540439 FN1024-S Single Base Substitution T-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2476.SNP.4:30547141 chr04:030547141 0 W/30547141-30547141 FN2476 SNP A -> G AC=1;AN=200;BQB=0.120645;DP=3805;DP4=1639,1115,9,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.67392e-10;MQSB=0.374605;RPB=0.72198;SGB=-455.235;VDB=0.970301;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.4:30548085 chr04:030548085 0 W/30548085-30548085 FN875-S Single Base Substitution G-A INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN2158-S.SNP.4:30554941 chr04:030554941 0 W/30554941-30554941 FN2158-S SNP A -> G AC=1;AN=168;BQB=0.681245;DP=4260;DP4=1879,2345,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=15;MQ0F=0.5277;MQB=3.79742e-05;MQSB=0;RPB=0.841807;SGB=-11.926;VDB=0.722759;EFF=INTRON(MODIFIER||||352|LOC_Os04g51580|protein_coding|CODING|LOC_Os04g51580.1|3|1),INTRON(MODIFIER||||352|LOC_Os04g51580|protein_coding|CODING|LOC_Os04g51580.2|2|1) FN3373-S.SNP.4:30557909 chr04:030557909 0 W/30557909-30557909 FN3373-S SNP A -> G AC=1;AN=184;BQB=0.964394;DP=2553;DP4=1543,696,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.57487e-11;MQSB=0.326216;RPB=0.791862;SGB=-37.665;VDB=0.163531;EFF=INTRON(MODIFIER||||352|LOC_Os04g51580|protein_coding|CODING|LOC_Os04g51580.1|1|1) FN2789-S.SNP.4:30562592 chr04:030562592 0 W/30562592-30562592 FN2789-S SNP C -> A AC=1;AN=198;BQB=0.908452;DP=4138;DP4=1963,1844,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31214e-17;MQSB=0.593699;RPB=0.855853;SGB=-7.28946;VDB=0.977645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.4:30562842 chr04:030562842 0 W/30562842-30562842 FN3763-S SNP G -> A AC=2;AN=190;BQB=0.937904;DP=3053;DP4=1586,1284,17,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.03746e-17;MQSB=0.986154;RPB=0.974641;SGB=117.403;VDB=0.172568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.4:30571953 chr04:030571953 0 W/30571953-30571953 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.672567;DP=3023;DP4=1641,1208,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.87339e-10;MQSB=0.963334;RPB=0.218658;SGB=60.9777;VDB=0.527904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.4:30575186 chr04:030575186 0 W/30575186-30575186 FN2169-S SNP C -> G AC=1;AN=168;BQB=0.138575;DP=4148;DP4=2061,2058,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.01231e-05;MQSB=0.996547;RPB=0.958556;SGB=-0.101747;VDB=0.485718;EFF=INTRON(MODIFIER||||1088|LOC_Os04g51610|protein_coding|CODING|LOC_Os04g51610.1|24|1),INTRON(MODIFIER||||1044|LOC_Os04g51610|protein_coding|CODING|LOC_Os04g51610.3|24|1) FN2536-S.SNP.4:30588063 chr04:030588063 0 W/30588063-30588063 FN2536-S SNP G -> A AC=1;AN=198;BQB=0.961706;DP=3153;DP4=1045,1954,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.61849e-06;MQSB=0.999637;RPB=0.819398;SGB=22.1736;VDB=0.5193;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.4:30591531 chr04:030591531 0 W/30591531-30591531 FN4158-S SNP G -> T AC=1;AN=170;BQB=0.444398;DP=2245;DP4=986,1163,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.58423e-05;MQSB=0.771209;RPB=0.944048;SGB=17.4413;VDB=0.32254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.4:30595886 chr04:030595886 0 W/30595886-30595886 FN2095-S SNP G -> A AC=1;AN=168;BQB=0.219515;DP=3848;DP4=1889,1926,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44206e-08;MQSB=0.997539;RPB=0.932067;SGB=-14.5109;VDB=0.8357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:30597959 chr04:030597959 0 W/30597959-30597959 FN3516-S SNP A -> G AC=1;AN=188;BQB=0.878087;DP=3292;DP4=1761,1358,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.99994e-09;MQSB=0.9842;RPB=0.861497;SGB=39.5276;VDB=0.337067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.4:30598011 chr04:030598011 0 W/30598011-30598011 FN1348-S Single Base Substitution C-G INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3713-S.SNP.4:30602480 chr04:030602480 0 W/30602480-30602480 FN3713-S SNP A -> G AC=1;AN=190;BQB=0.996746;DP=2736;DP4=1364,1281,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.42817e-10;MQSB=0.990665;RPB=0.847083;SGB=76.4186;VDB=0.492861;EFF=INTRON(MODIFIER||||244|LOC_Os04g51630|protein_coding|CODING|LOC_Os04g51630.2|7|1) 822-5-6.SNP.4:30606359 chr04:030606359 0 W/30606359-30606359 822-5-6 Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os04g51640 expressed protein SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-54.SNP.4:30611281 chr04:030611281 0 W/30611281-30611281 FN-54 Single Base Substitution G-A INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2666-S.SNP.4:30612116 chr04:030612116 0 W/30612116-30612116 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.0423711;DP=2012;DP4=1594,23,14,0;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000166266;MQSB=1.328e-14;RPB=0.583603;SGB=3.06925;VDB=0.735281;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.4:30613890 chr04:030613890 0 W/30613890-30613890 FN712-S Single Base Substitution C-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN487-S.SNP.4:30631547 chr04:030631547 0 W/30631547-30631547 FN487-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g51700 DNA ligase I, ATP-dependent family protein, expressed SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN857-S.SNP.4:30633279 chr04:030633279 0 W/30633279-30633279 FN857-S Single Base Substitution A-G INTRON HOMO SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN-123.SNP.4:30636172 chr04:030636172 0 W/30636172-30636172 FN-123 Single Base Substitution T-C INTRON HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN728-S.SNP.4:30641217 chr04:030641217 0 W/30641217-30641217 FN728-S Single Base Substitution G-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2456.SNP.4:30644821 chr04:030644821 0 W/30644821-30644821 FN2456 SNP A -> T AC=1;AN=200;BQB=0.642068;DP=4781;DP4=2215,2371,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81793e-08;MQSB=0.998918;RPB=0.705118;SGB=21.6694;VDB=0.80552;EFF=INTRON(MODIFIER||||482|LOC_Os04g51710|protein_coding|CODING|LOC_Os04g51710.1|1|1) FN971-S.SNP.4:30646071 chr04:030646071 0 W/30646071-30646071 FN971-S Single Base Substitution T-C INTERGENIC HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN929-S.SNP.4:30646929 chr04:030646929 0 W/30646929-30646929 FN929-S Single Base Substitution G-T INTERGENIC HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2500.SNP.4:30650849 chr04:030650849 0 W/30650849-30650849 FN2500 SNP A -> G AC=1;AN=200;BQB=0.420733;DP=4348;DP4=1869,1806,6,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.024149;MQB=0.000241019;MQSB=1.03548e-10;RPB=0.501676;SGB=29.4541;VDB=0.742911;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D522G|1037|LOC_Os04g51720|protein_coding|CODING|LOC_Os04g51720.1|2|1) FN2629-S.SNP.4:30662169 chr04:030662169 0 W/30662169-30662169 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.998025;DP=4999;DP4=1957,2834,11,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00620124;MQB=6.62397e-09;MQSB=1.12174e-22;RPB=0.727084;SGB=109.527;VDB=0.479968;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P262|1759|LOC_Os04g51740|protein_coding|CODING|LOC_Os04g51740.1|2|1) FN2487.SNP.4:30667733 chr04:030667733 0 W/30667733-30667733 FN2487 SNP C -> T AC=1;AN=200;BQB=0.867839;DP=3324;DP4=1657,1298,7,6;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.155235;MQB=0.230583;MQSB=0.436904;RPB=0.0616817;SGB=36.6644;VDB=0.0478449;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R855Q|1297|LOC_Os04g51750|protein_coding|CODING|LOC_Os04g51750.1|2|1) FN2364.SNP.4:30671778 chr04:030671778 0 W/30671778-30671778 FN2364 SNP C -> T AC=2;AN=192;BQB=0.868591;DP=4513;DP4=2202,2027,21,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.00409e-18;MQSB=0.569708;RPB=0.894945;SGB=128.889;VDB=0.282761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.4:30674154 chr04:030674154 0 W/30674154-30674154 FN3899-S SNP C -> T AC=1;AN=158;BQB=0.998761;DP=2545;DP4=1247,1186,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00196464;MQB=1.6101e-10;MQSB=0.00125122;RPB=0.961622;SGB=86.3921;VDB=0.526601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.4:30676453 chr04:030676453 0 W/30676453-30676453 FN2187-S SNP C -> T AC=1;AN=190;BQB=0.169616;DP=4936;DP4=2340,2314,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74033e-11;MQSB=0.944405;RPB=0.984017;SGB=60.9777;VDB=0.872266;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.4:30686975 chr04:030686975 0 W/30686975-30686975 FN-400 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.4:30686975 chr04:030686975 0 W/30686975-30686975 FN400-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN858-S.SNP.4:30687030 chr04:030687030 0 W/30687030-30687030 FN858-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g51786 containing DUF163, putative, expressed SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN858-S.SNP.4:30687032 chr04:030687032 0 W/30687032-30687032 FN858-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3524-S.SNP.4:30697667 chr04:030697667 0 W/30697667-30697667 FN3524-S SNP T -> A AC=1;AN=188;BQB=0.638641;DP=2746;DP4=1327,1326,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.88857e-11;MQSB=0.935588;RPB=0.866524;SGB=71.6954;VDB=0.352644;EFF=UTR_3_PRIME(MODIFIER||216||221|LOC_Os04g51796|protein_coding|CODING|LOC_Os04g51796.1|13|1),UTR_3_PRIME(MODIFIER||216||221|LOC_Os04g51796|protein_coding|CODING|LOC_Os04g51796.2|13|1),UTR_3_PRIME(MODIFIER||1725||220|LOC_Os04g51796|protein_coding|CODING|LOC_Os04g51796.3|13|1) FN-52.SNP.4:30700933 chr04:030700933 0 W/30700933-30700933 FN-52 Single Base Substitution A-T INTRON HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN3811-S.SNP.4:30702141 chr04:030702141 0 W/30702141-30702141 FN3811-S SNP T -> A AC=1;AN=190;BQB=0.871543;DP=3420;DP4=1546,1612,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30699e-14;MQSB=0.625245;RPB=0.81935;SGB=54.3062;VDB=0.263349;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.4:30702440 chr04:030702440 0 W/30702440-30702440 FN748-S Single Base Substitution C-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN748-S.SNP.4:30702442 chr04:030702442 0 W/30702442-30702442 FN748-S Single Base Substitution C-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1128-S.SNP.4:30704282 chr04:030704282 0 W/30704282-30704282 FN1128-S Single Base Substitution C-A INTRON HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN2428.SNP.4:30709023 chr04:030709023 0 W/30709023-30709023 FN2428 SNP T -> G AC=2;AN=200;BQB=0.943272;DP=5003;DP4=2242,2481,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.96619e-26;MQSB=0.891119;RPB=0.966444;SGB=105.035;VDB=0.808748;EFF=INTRON(MODIFIER||||219|LOC_Os04g51800|protein_coding|CODING|LOC_Os04g51800.1|8|1) FN402-S.SNP.4:30720808 chr04:030720808 0 W/30720808-30720808 FN402-S Single Base Substitution G-T INTRON HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN-396.SNP.4:30725124 chr04:030725124 0 W/30725124-30725124 FN-396 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN-185.SNP.4:30728496 chr04:030728496 0 W/30728496-30728496 FN-185 Single Base Substitution C-T INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN3551-S.SNP.4:30732312 chr04:030732312 0 W/30732312-30732312 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.987786;DP=2709;DP4=1402,1254,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72552e-05;MQSB=0.999386;RPB=0.356478;SGB=26.2637;VDB=0.601916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.4:30732313 chr04:030732313 0 W/30732313-30732313 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.915333;DP=2711;DP4=1370,1264,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.79388e-05;MQSB=0.990015;RPB=0.396245;SGB=26.2637;VDB=0.61301;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.4:30733665 chr04:030733665 0 W/30733665-30733665 FN721-S Single Base Substitution T-C INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN1288-S.SNP.4:30739426 chr04:030739426 0 W/30739426-30739426 FN1288-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3373-S.SNP.4:30745510 chr04:030745510 0 W/30745510-30745510 FN3373-S SNP T -> C AC=1;AN=184;BQB=0.916539;DP=3206;DP4=1574,1495,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0495945;MQB=0.201557;MQSB=0.751507;RPB=0.169346;SGB=32.2261;VDB=0.13933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F342L|723|LOC_Os04g51840|protein_coding|CODING|LOC_Os04g51840.1|3|1) FN3800-S.SNP.4:30750739 chr04:030750739 0 W/30750739-30750739 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.943545;DP=2942;DP4=1612,1232,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0149558;MQB=1.90688e-05;MQSB=0.33867;RPB=0.995315;SGB=58.2031;VDB=0.91409;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.4:30754487 chr04:030754487 0 W/30754487-30754487 FN4189-S SNP A -> T AC=1;AN=170;BQB=0.980248;DP=2588;DP4=1198,1215,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24687e-07;MQSB=0.966403;RPB=0.956816;SGB=38.987;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.4:30754488 chr04:030754488 0 W/30754488-30754488 FN4189-S SNP A -> T AC=1;AN=170;BQB=0.714643;DP=2592;DP4=1218,1202,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.05123e-07;MQSB=0.967475;RPB=0.968412;SGB=38.987;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.4:30755630 chr04:030755630 0 W/30755630-30755630 FN698-S Single Base Substitution C-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN698-S.SNP.4:30755631 chr04:030755631 0 W/30755631-30755631 FN698-S Single Base Substitution G-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN775-S.SNP.4:30756664 chr04:030756664 0 W/30756664-30756664 FN775-S Single Base Substitution C-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-380.SNP.4:30772519 chr04:030772519 0 W/30772519-30772519 FN-380 Single Base Substitution G-A INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2430.SNP.4:30775822 chr04:030775822 0 W/30775822-30775822 FN2430 SNP C -> A AC=1;AN=200;BQB=0.756474;DP=5104;DP4=2482,2309,16,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000587774;MQB=8.69453e-16;MQSB=0.843947;RPB=0.966216;SGB=73.7728;VDB=0.905239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.4:30790331 chr04:030790331 0 W/30790331-30790331 FN3949-S SNP C -> T AC=1;AN=168;BQB=0.959298;DP=3383;DP4=1957,1257,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18021e-10;MQSB=0.962843;RPB=0.495502;SGB=78.7577;VDB=0.548896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.4:30795102 chr04:030795102 0 W/30795102-30795102 FN2323 SNP A -> G AC=1;AN=192;BQB=0.677592;DP=4801;DP4=2314,2202,4,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.16211e-07;MQSB=0.961509;RPB=0.233375;SGB=36.2157;VDB=0.104618;EFF=INTRON(MODIFIER||||772|LOC_Os04g51900|protein_coding|CODING|LOC_Os04g51900.1|6|1) FN-112.SNP.4:30800334 chr04:030800334 0 W/30800334-30800334 FN-112 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g51910 proteasome/cyclosome repeat containing protein, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN937-S.SNP.4:30802861 chr04:030802861 0 W/30802861-30802861 FN937-S Single Base Substitution T-A INTRON HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2529-S.SNP.4:30813586 chr04:030813586 0 W/30813586-30813586 FN2529-S SNP C -> T AC=2;AN=198;BQB=0.935543;DP=3467;DP4=1458,1778,13,15;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00115374;MQB=2.96042e-11;MQSB=0.555759;RPB=0.983652;SGB=90.4807;VDB=0.942409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S765L|1784|LOC_Os04g51930|protein_coding|CODING|LOC_Os04g51930.1|2|1) FN-166.SNP.4:30820887 chr04:030820887 0 W/30820887-30820887 FN-166 Single Base Substitution A-C INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN791-S.SNP.4:30831750 chr04:030831750 0 W/30831750-30831750 FN791-S Single Base Substitution G-A INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3858-S.SNP.4:30831994 chr04:030831994 0 W/30831994-30831994 FN3858-S SNP A -> T AC=1;AN=158;BQB=0.958473;DP=3366;DP4=1837,1362,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.242127;MQB=0.0834842;MQSB=0;RPB=0.424013;SGB=38.3284;VDB=0.91494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.4:30832060 chr04:030832060 0 W/30832060-30832060 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.622551;DP=7124;DP4=4523,2198,7,15;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.198484;MQB=0.0382878;MQSB=0;RPB=0.372157;SGB=95.7111;VDB=0.159471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.4:30836904 chr04:030836904 0 W/30836904-30836904 FN2532-S SNP C -> T AC=2;AN=198;BQB=0.0796049;DP=4130;DP4=1838,2060,11,15;HOB=0.019998;ICB=0.495001;MQ=29;MQ0F=0.0849879;MQB=0.273391;MQSB=0;RPB=0.694891;SGB=113.881;VDB=0.678147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1680-S.SNP.4:30843747 chr04:030843747 0 W/30843747-30843747 FN1680-S SNP T -> A AC=2;AN=188;BQB=0.607038;DP=3836;DP4=2070,1714,25,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.25045e-27;MQSB=0.881139;RPB=0.840748;SGB=94.7451;VDB=0.0274669;EFF=INTRON(MODIFIER||||749|LOC_Os04g51960|protein_coding|CODING|LOC_Os04g51960.1|2|1) FN1680-S.SNP.4:30843748 chr04:030843748 0 W/30843748-30843748 FN1680-S SNP C -> A AC=2;AN=188;BQB=0.64415;DP=3838;DP4=2063,1719,25,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.44011e-26;MQSB=0.916381;RPB=0.954349;SGB=48.7505;VDB=0.0716545;EFF=INTRON(MODIFIER||||749|LOC_Os04g51960|protein_coding|CODING|LOC_Os04g51960.1|2|1) FN1680-S.SNP.4:30843749 chr04:030843749 0 W/30843749-30843749 FN1680-S SNP T -> A AC=2;AN=188;BQB=0.10938;DP=3846;DP4=2069,1716,29,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54722e-23;MQSB=0.884565;RPB=0.857776;SGB=-211.223;VDB=0.177387;EFF=INTRON(MODIFIER||||749|LOC_Os04g51960|protein_coding|CODING|LOC_Os04g51960.1|2|1) FN3442-S.SNP.4:30844731 chr04:030844731 0 W/30844731-30844731 FN3442-S SNP G -> A AC=1;AN=184;BQB=0.98777;DP=2532;DP4=1290,1164,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.10706e-07;MQSB=0.97784;RPB=0.832163;SGB=48.7425;VDB=0.730534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R402H|749|LOC_Os04g51960|protein_coding|CODING|LOC_Os04g51960.1|3|1) FN414-S.SNP.4:30846725 chr04:030846725 0 W/30846725-30846725 FN414-S Single Base Substitution C-T INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2480.SNP.4:30847118 chr04:030847118 0 W/30847118-30847118 FN2480 SNP T -> A AC=2;AN=200;BQB=0.697929;DP=4678;DP4=2383,2016,13,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08312e-18;MQSB=0.997749;RPB=0.651333;SGB=94.3471;VDB=0.178607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.4:30847119 chr04:030847119 0 W/30847119-30847119 FN2480 SNP C -> A AC=2;AN=200;BQB=0.966726;DP=4658;DP4=2419,2040,16,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.53292e-20;MQSB=0.999705;RPB=0.725056;SGB=33.5675;VDB=0.117383;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN-161 Single Base Substitution G-A INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN-300.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN-300 Single Base Substitution G-A INTERGENIC HOMO SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN-372.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN-372 Single Base Substitution G-A INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1494-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN1494-S Single Base Substitution G-A INTERGENIC Homo SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN239-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN239-S Single Base Substitution G-A INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2691-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN2691-S SNP G -> A AC=2;AN=200;BQB=0.781867;DP=4960;DP4=2730,1914,24,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.73904e-23;MQSB=0.992217;RPB=0.0821289;SGB=130.399;VDB=0.263215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN3339-S SNP G -> A AC=2;AN=184;BQB=0.813306;DP=3223;DP4=1894,1198,10,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.98767e-09;MQSB=0.994594;RPB=0.145368;SGB=53.3568;VDB=0.288302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN3476-S SNP G -> A AC=2;AN=182;BQB=0.997205;DP=2853;DP4=1669,1069,25,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.84836e-20;MQSB=0.99559;RPB=0.805403;SGB=170.831;VDB=0.755384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN3524-S SNP G -> A AC=2;AN=188;BQB=0.964762;DP=3052;DP4=1802,1124,23,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.54485e-23;MQSB=0.998435;RPB=0.567987;SGB=138.74;VDB=0.679326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN3957-S SNP G -> A AC=2;AN=168;BQB=0.544876;DP=2689;DP4=1536,1018,17,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.08885e-15;MQSB=0.828392;RPB=0.30905;SGB=105.343;VDB=0.144746;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN4148-S SNP G -> A AC=2;AN=170;BQB=0.989106;DP=2589;DP4=1516,967,18,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.80908e-16;MQSB=0.999857;RPB=0.791525;SGB=132.282;VDB=0.530411;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN896-S Single Base Substitution G-A INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN950-S.SNP.4:30851457 chr04:030851457 0 W/30851457-30851457 FN950-S Single Base Substitution G-A INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2431.SNP.4:30852910 chr04:030852910 0 W/30852910-30852910 FN2431 SNP G -> A AC=1;AN=200;BQB=0.237691;DP=4627;DP4=2433,1977,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14147e-08;MQSB=0.858708;RPB=0.825755;SGB=39.9056;VDB=0.960266;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T235M|339|LOC_Os04g51970|protein_coding|CODING|LOC_Os04g51970.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T235M|339|LOC_Os04g51970|protein_coding|CODING|LOC_Os04g51970.2|6|1) FN1453-S.SNP.4:30864825 chr04:030864825 0 W/30864825-30864825 FN1453-S Single Base Substitution T-C INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN4208-S.SNP.4:30882293 chr04:030882293 0 W/30882293-30882293 FN4208-S SNP G -> A AC=2;AN=170;BQB=0.982287;DP=2098;DP4=952,1081,9,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.70899e-10;MQSB=0.988202;RPB=0.392825;SGB=48.6486;VDB=0.301308;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.4:30886922 chr04:030886922 0 W/30886922-30886922 FN763-S Single Base Substitution C-T INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. W22-2-1.SNP.4:30891589 chr04:030891589 0 W/30891589-30891589 W22-2-1 Single Base Substitution A-G INTRON HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1552-S.SNP.4:30895344 chr04:030895344 0 W/30895344-30895344 FN1552-S SNP G -> A AC=2;AN=188;BQB=0.383798;DP=3936;DP4=2114,1766,20,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.71804e-17;MQSB=0.999452;RPB=0.403815;SGB=-46.9554;VDB=0.8854;EFF=INTRON(MODIFIER||||812|LOC_Os04g52020|protein_coding|CODING|LOC_Os04g52020.1|20|1) W475-4-2.SNP.4:30897236 chr04:030897236 0 W/30897236-30897236 W475-4-2 Single Base Substitution T-C INTRON HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN1131-S.SNP.4:30904662 chr04:030904662 0 W/30904662-30904662 FN1131-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN858-S.SNP.4:30906780 chr04:030906780 0 W/30906780-30906780 FN858-S Single Base Substitution C-T INTRON HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3725-S.SNP.4:30915369 chr04:030915369 0 W/30915369-30915369 FN3725-S SNP T -> G AC=1;AN=190;BQB=0.781619;DP=2772;DP4=1380,1299,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36496e-07;MQSB=0.902463;RPB=0.575245;SGB=53.6492;VDB=0.426591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K815Q|969|LOC_Os04g52050|protein_coding|CODING|LOC_Os04g52050.1|6|1) FN3725-S.SNP.4:30915370 chr04:030915370 0 W/30915370-30915370 FN3725-S SNP C -> A AC=1;AN=190;BQB=0.809407;DP=2776;DP4=1382,1291,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.67852e-09;MQSB=0.808125;RPB=0.522565;SGB=36.1006;VDB=0.443537;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G814|969|LOC_Os04g52050|protein_coding|CODING|LOC_Os04g52050.1|6|1) FN3803-S.SNP.4:30919840 chr04:030919840 0 W/30919840-30919840 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.975796;DP=2708;DP4=1391,1230,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10998e-08;MQSB=0.978366;RPB=0.579562;SGB=53.6492;VDB=0.782957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.4:30920163 chr04:030920163 0 W/30920163-30920163 FN3453-S SNP G -> T AC=1;AN=184;BQB=0.686121;DP=2559;DP4=1143,1340,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22497e-07;MQSB=0.917449;RPB=0.840584;SGB=71.3514;VDB=0.0867109;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.4:30921862 chr04:030921862 0 W/30921862-30921862 FN3701-S SNP G -> A AC=1;AN=190;BQB=0.972466;DP=3143;DP4=1700,1323,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12005e-09;MQSB=0.988189;RPB=0.39689;SGB=39.6545;VDB=0.10893;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G695|871|LOC_Os04g52060|protein_coding|CODING|LOC_Os04g52060.1|5|1) FN-165.SNP.4:30923720 chr04:030923720 0 W/30923720-30923720 FN-165 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g52060 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN-165.SNP.4:30923721 chr04:030923721 0 W/30923721-30923721 FN-165 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g52060 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3948-S.SNP.4:30923984 chr04:030923984 0 W/30923984-30923984 FN3948-S SNP T -> C AC=1;AN=168;BQB=0.972127;DP=2477;DP4=1161,1236,5,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.76235e-12;MQSB=0.996186;RPB=0.947387;SGB=96.481;VDB=0.604316;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R190|871|LOC_Os04g52060|protein_coding|CODING|LOC_Os04g52060.1|2|1) FN3380-S.SNP.4:30924724 chr04:030924724 0 W/30924724-30924724 FN3380-S SNP A -> G AC=1;AN=184;BQB=0.952547;DP=3091;DP4=1610,1292,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36363e-08;MQSB=0.691587;RPB=0.782524;SGB=23.2751;VDB=0.101078;EFF=INTRON(MODIFIER||||871|LOC_Os04g52060|protein_coding|CODING|LOC_Os04g52060.1|1|1) FN580-S.SNP.4:30924982 chr04:030924982 0 W/30924982-30924982 FN580-S Single Base Substitution C-T INTRON HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3332-S.SNP.4:30926700 chr04:030926700 0 W/30926700-30926700 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.876095;DP=2748;DP4=1302,1361,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.33934e-11;MQSB=0.954483;RPB=0.998006;SGB=33.3622;VDB=0.825259;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.4:30929378 chr04:030929378 0 W/30929378-30929378 FN485-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g52074 expressed protein SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3722-S.SNP.4:30931111 chr04:030931111 0 W/30931111-30931111 FN3722-S SNP T -> C AC=2;AN=190;BQB=0.999987;DP=2987;DP4=1472,1396,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5616e-14;MQSB=0.998823;RPB=0.682304;SGB=49.1985;VDB=0.135319;EFF=INTRON(MODIFIER||||1030|LOC_Os04g52074|protein_coding|CODING|LOC_Os04g52074.1|3|1) FN902-S.SNP.4:30934281 chr04:030934281 0 W/30934281-30934281 FN902-S Single Base Substitution A-G INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3917-S.SNP.4:30935847 chr04:030935847 0 W/30935847-30935847 FN3917-S SNP G -> A AC=1;AN=158;BQB=0.427334;DP=2557;DP4=1305,1145,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.04021e-05;MQSB=0.847105;RPB=0.939547;SGB=60.1755;VDB=0.0185294;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.4:30936768 chr04:030936768 0 W/30936768-30936768 FN1140-S Single Base Substitution G-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-387.SNP.4:30957261 chr04:030957261 0 W/30957261-30957261 FN-387 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g52120 potassium transporter, putative, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN3399-S.SNP.4:30961016 chr04:030961016 0 W/30961016-30961016 FN3399-S SNP C -> G AC=1;AN=184;BQB=0.971115;DP=2834;DP4=1203,1566,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.76918e-08;MQSB=0.945189;RPB=0.927542;SGB=48.7425;VDB=0.542119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.4:30968024 chr04:030968024 0 W/30968024-30968024 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN463-S.SNP.4:30970634 chr04:030970634 0 W/30970634-30970634 FN463-S Single Base Substitution A-G INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN680-S.SNP.4:30972102 chr04:030972102 0 W/30972102-30972102 FN680-S Single Base Substitution T-A INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1371-S.SNP.4:30973737 chr04:030973737 0 W/30973737-30973737 FN1371-S Single Base Substitution G-A INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3593-S.SNP.4:30980398 chr04:030980398 0 W/30980398-30980398 FN3593-S SNP C -> A AC=1;AN=190;BQB=0.818256;DP=2748;DP4=1274,1363,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.71164e-10;MQSB=0.997819;RPB=0.590165;SGB=4.11112;VDB=0.0345618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.4:30982664 chr04:030982664 0 W/30982664-30982664 FN1335-S Single Base Substitution C-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN-127.SNP.4:30984816 chr04:030984816 0 W/30984816-30984816 FN-127 Single Base Substitution C-T INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3630-S.SNP.4:30987141 chr04:030987141 0 W/30987141-30987141 FN3630-S SNP C -> T AC=2;AN=190;BQB=0.99068;DP=2771;DP4=1307,1324,14,14;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0104655;MQB=0.042755;MQSB=0.371626;RPB=0.784493;SGB=121.957;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN-393.SNP.4:31000340 chr04:031000340 0 W/31000340-31000340 FN-393 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN795-S.SNP.4:31014333 chr04:031014333 0 W/31014333-31014333 FN795-S Single Base Substitution A-G INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1247-S.SNP.4:31014536 chr04:031014536 0 W/31014536-31014536 FN1247-S Single Base Substitution G-A INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN2568-S.SNP.4:31020673 chr04:031020673 0 W/31020673-31020673 FN2568-S SNP A -> T AC=2;AN=198;BQB=0.803182;DP=3943;DP4=1915,1836,9,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000507228;MQB=1.02548e-09;MQSB=0.88201;RPB=0.98947;SGB=63.3342;VDB=0.215293;EFF=INTRON(MODIFIER||||739|LOC_Os04g52210|protein_coding|CODING|LOC_Os04g52210.1|2|1) FN-372.SNP.4:31025460 chr04:031025460 0 W/31025460-31025460 FN-372 Single Base Substitution T-G INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-372.SNP.4:31025461 chr04:031025461 0 W/31025461-31025461 FN-372 Single Base Substitution T-C INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN4166-S.SNP.4:31026022 chr04:031026022 0 W/31026022-31026022 FN4166-S SNP G -> A AC=1;AN=170;BQB=0.991846;DP=2613;DP4=1157,1351,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.16516e-07;MQSB=0.985446;RPB=0.148667;SGB=12.556;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.4:31033662 chr04:031033662 0 W/31033662-31033662 FN873-S Single Base Substitution A-G INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2612-S.SNP.4:31037224 chr04:031037224 0 W/31037224-31037224 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.556883;DP=4388;DP4=2104,1968,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000227894;MQB=1.50523e-15;MQSB=0.80569;RPB=0.244095;SGB=-5.5041;VDB=0.369476;EFF=INTRON(MODIFIER||||566|LOC_Os04g52240|protein_coding|CODING|LOC_Os04g52240.1|2|1) FN-250.SNP.4:31048457 chr04:031048457 0 W/31048457-31048457 FN-250 Single Base Substitution G-A INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN4126-S.SNP.4:31054872 chr04:031054872 0 W/31054872-31054872 FN4126-S SNP T -> C AC=1;AN=182;BQB=0.909117;DP=2817;DP4=1522,1227,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.53134e-11;MQSB=0.999325;RPB=0.971989;SGB=49.6712;VDB=0.359373;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.4:31054875 chr04:031054875 0 W/31054875-31054875 FN4126-S SNP T -> C AC=1;AN=182;BQB=0.94598;DP=2841;DP4=1517,1021,8,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.31039e-10;MQSB=0.994628;RPB=0.901958;SGB=9.68217;VDB=0.656285;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.4:31056015 chr04:031056015 0 W/31056015-31056015 FN-368 Single Base Substitution T-G INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3363-S.SNP.4:31058884 chr04:031058884 0 W/31058884-31058884 FN3363-S SNP G -> T AC=1;AN=184;BQB=0.830328;DP=3146;DP4=1309,1666,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.74016e-09;MQSB=0.982977;RPB=0.322173;SGB=-14.1922;VDB=0.717776;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.4:31061388 chr04:031061388 0 W/31061388-31061388 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.256467;DP=4334;DP4=1952,2052,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000230734;MQB=7.75089e-05;MQSB=0.0671073;RPB=0.981929;SGB=2.55724;VDB=0.481346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.4:31077092 chr04:031077092 0 W/31077092-31077092 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.882702;DP=4985;DP4=2374,2352,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60531e-13;MQSB=0.98083;RPB=0.0500075;SGB=47.7211;VDB=0.220638;EFF=INTRON(MODIFIER||||107|LOC_Os04g52300|protein_coding|CODING|LOC_Os04g52300.1|1|1) FN3412-S.SNP.4:31084792 chr04:031084792 0 W/31084792-31084792 FN3412-S SNP A -> T AC=1;AN=184;BQB=0.866596;DP=3363;DP4=1648,1578,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.72292e-12;MQSB=0.967575;RPB=0.281782;SGB=38.4058;VDB=0.238663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.4:31086765 chr04:031086765 0 W/31086765-31086765 FN1329-S Single Base Substitution T-A INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN488-S.SNP.4:31103461 chr04:031103461 0 W/31103461-31103461 FN488-S Single Base Substitution G-A INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3514-S.SNP.4:31114238 chr04:031114238 0 W/31114238-31114238 FN3514-S SNP A -> G AC=1;AN=188;BQB=0.460238;DP=3116;DP4=1329,1626,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99505e-05;MQSB=0.966202;RPB=0.955765;SGB=3.99491;VDB=0.459099;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.4:31114987 chr04:031114987 0 W/31114987-31114987 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.990069;DP=2683;DP4=1153,1456,3,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000221763;MQSB=0.910521;RPB=0.837406;SGB=21.2191;VDB=0.19611;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.4:31116653 chr04:031116653 0 W/31116653-31116653 FN4069-S SNP A -> T AC=1;AN=182;BQB=0.990762;DP=3030;DP4=1402,1560,12,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.99008e-16;MQSB=0.999062;RPB=0.209492;SGB=125.307;VDB=0.0824405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.4:31116973 chr04:031116973 0 W/31116973-31116973 FN1670-S SNP C -> T AC=1;AN=188;BQB=0.0876396;DP=4070;DP4=1676,2346,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.61088e-10;MQSB=0.952838;RPB=0.949642;SGB=-335.149;VDB=0.0851315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.4:31130322 chr04:031130322 0 W/31130322-31130322 FN1740-S SNP T -> C AC=2;AN=188;BQB=0.318904;DP=3806;DP4=1937,1809,20,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.99652e-19;MQSB=0.997835;RPB=0.278077;SGB=-0.330801;VDB=0.190845;EFF=INTRON(MODIFIER||||791|LOC_Os04g52390|protein_coding|CODING|LOC_Os04g52390.1|7|1) FN2299.SNP.4:31137640 chr04:031137640 0 W/31137640-31137640 FN2299 SNP G -> A AC=2;AN=192;BQB=0.0669345;DP=5126;DP4=2736,2034,26,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.1716e-25;MQSB=0.979357;RPB=0.719274;SGB=139.582;VDB=0.658302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.4:31140245 chr04:031140245 0 W/31140245-31140245 FN1231-S Single Base Substitution G-A INTRON HOMO SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN_772-3-1.SNP.4:31143047 chr04:031143047 0 W/31143047-31143047 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN500-S.SNP.4:31148580 chr04:031148580 0 W/31148580-31148580 FN500-S Single Base Substitution C-T INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN552-S.SNP.4:31157438 chr04:031157438 0 W/31157438-31157438 FN552-S Single Base Substitution C-A INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN941-S.SNP.4:31180642 chr04:031180642 0 W/31180642-31180642 FN941-S Single Base Substitution T-A INTRON HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3434-S.SNP.4:31183077 chr04:031183077 0 W/31183077-31183077 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.946906;DP=2962;DP4=1364,1489,17,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.80271e-18;MQSB=0.941321;RPB=0.980111;SGB=148.222;VDB=0.194531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.4:31184023 chr04:031184023 0 W/31184023-31184023 FN3506-S SNP T -> C AC=1;AN=188;BQB=0.965;DP=3116;DP4=1511,1500,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82468e-08;MQSB=0.817106;RPB=0.102272;SGB=53.5223;VDB=0.0535264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.4:31185515 chr04:031185515 0 W/31185515-31185515 FN2398 SNP G -> A AC=1;AN=200;BQB=0.926254;DP=4224;DP4=1601,2297,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27241e-11;MQSB=0.883849;RPB=0.0617023;SGB=69.1109;VDB=0.0255671;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.4:31189258 chr04:031189258 0 W/31189258-31189258 FN456-S Single Base Substitution T-G INTRON HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2500.SNP.4:31192815 chr04:031192815 0 W/31192815-31192815 FN2500 SNP A -> C AC=1;AN=200;BQB=0.686833;DP=4770;DP4=2313,2211,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81734e-09;MQSB=0.366139;RPB=0.96176;SGB=68.0801;VDB=0.10895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aCa|K853T|1510|LOC_Os04g52460|protein_coding|CODING|LOC_Os04g52460.1|4|1) FN4098-S.SNP.4:31201196 chr04:031201196 0 W/31201196-31201196 FN4098-S SNP A -> T AC=1;AN=182;BQB=0.549157;DP=3090;DP4=1416,1608,3,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.13984e-05;MQSB=0.780974;RPB=0.602727;SGB=32.1169;VDB=0.173134;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.4:31205706 chr04:031205706 0 W/31205706-31205706 FN4187-S SNP C -> T AC=2;AN=170;BQB=0.554042;DP=2683;DP4=1275,1333,14,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.85723e-14;MQSB=0.117442;RPB=0.128881;SGB=100.288;VDB=0.61752;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F103|582|LOC_Os04g52479|protein_coding|CODING|LOC_Os04g52479.3|1|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F103|582|LOC_Os04g52479|protein_coding|CODING|LOC_Os04g52479.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F103|582|LOC_Os04g52479|protein_coding|CODING|LOC_Os04g52479.2|2|1) FN3280-S.SNP.4:31232324 chr04:031232324 0 W/31232324-31232324 FN3280-S SNP T -> A AC=1;AN=184;BQB=0.9964;DP=3820;DP4=1770,1906,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57734e-09;MQSB=0.992146;RPB=0.901209;SGB=49.835;VDB=0.0293148;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.4:31234450 chr04:031234450 0 W/31234450-31234450 FN4126-S SNP A -> G AC=1;AN=182;BQB=0.927309;DP=2800;DP4=1232,1501,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.34885e-08;MQSB=0.990317;RPB=0.933047;SGB=39.1386;VDB=0.291443;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.4:31253008 chr04:031253008 0 W/31253008-31253008 FN-214 Single Base Substitution G-A INTRON HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1582-S.SNP.4:31255617 chr04:031255617 0 W/31255617-31255617 FN1582-S Single Base Substitution A-T INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1493-S.SNP.4:31265976 chr04:031265976 0 W/31265976-31265976 FN1493-S Single Base Substitution T-C INTRON HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN343-S.SNP.4:31271654 chr04:031271654 0 W/31271654-31271654 FN343-S Single Base Substitution A-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN-345.SNP.4:31272806 chr04:031272806 0 W/31272806-31272806 FN-345 Single Base Substitution T-A INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1534-S.SNP.4:31287778 chr04:031287778 0 W/31287778-31287778 FN1534-S Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-175.SNP.4:31289303 chr04:031289303 0 W/31289303-31289303 FN-175 Single Base Substitution T-C UTR_5_PRIME HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-25.SNP.4:31304024 chr04:031304024 0 W/31304024-31304024 FN-25 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN4096-S.SNP.4:31306973 chr04:031306973 0 W/31306973-31306973 FN4096-S SNP G -> A AC=2;AN=182;BQB=0.963853;DP=3554;DP4=1198,2258,9,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.87465e-11;MQSB=0.908441;RPB=0.456035;SGB=67.2255;VDB=0.673923;EFF=INTRON(MODIFIER||||935|LOC_Os04g52614|protein_coding|CODING|LOC_Os04g52614.1|1|1) FN2742-S.SNP.4:31313403 chr04:031313403 0 W/31313403-31313403 FN2742-S SNP C -> G AC=1;AN=200;BQB=0.815592;DP=4533;DP4=2018,2226,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.22766e-11;MQSB=0.997037;RPB=0.999942;SGB=39.9056;VDB=0.20048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R228P|948|LOC_Os04g52630|protein_coding|CODING|LOC_Os04g52630.1|8|1),SPLICE_SITE_REGION(LOW||||948|LOC_Os04g52630|protein_coding|CODING|LOC_Os04g52630.1|8|1) FN1675-S.SNP.4:31317162 chr04:031317162 0 W/31317162-31317162 FN1675-S SNP T -> C AC=1;AN=188;BQB=0.29391;DP=2901;DP4=1793,1064,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97255e-05;MQSB=0.996905;RPB=0.994698;SGB=-13.3699;VDB=0.460656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.4:31320260 chr04:031320260 0 W/31320260-31320260 FN2428 SNP T -> C AC=2;AN=200;BQB=0.801376;DP=4648;DP4=2406,1649,21,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.20076e-20;MQSB=0.999812;RPB=0.98336;SGB=141.763;VDB=0.512604;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T874A|1022|LOC_Os04g52640|protein_coding|CODING|LOC_Os04g52640.1|23|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T742A|890|LOC_Os04g52640|protein_coding|CODING|LOC_Os04g52640.2|22|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T742A|890|LOC_Os04g52640|protein_coding|CODING|LOC_Os04g52640.3|23|1) FN698-S.SNP.4:31329668 chr04:031329668 0 W/31329668-31329668 FN698-S Single Base Substitution T-G INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN698-S.SNP.4:31329669 chr04:031329669 0 W/31329669-31329669 FN698-S Single Base Substitution C-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN4260-S.SNP.4:31334821 chr04:031334821 0 W/31334821-31334821 FN4260-S SNP A -> T AC=1;AN=170;BQB=0.663384;DP=2090;DP4=867,1139,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.85502e-08;MQSB=0.954216;RPB=0.743659;SGB=41.7633;VDB=0.351174;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.4:31334821 chr04:031334821 0 W/31334821-31334821 FN793-S Single Base Substitution A-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1707-S.SNP.4:31335478 chr04:031335478 0 W/31335478-31335478 FN1707-S SNP G -> A AC=2;AN=188;BQB=0.99018;DP=2187;DP4=367,1787,3,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=3.12816e-07;MQSB=2.94035e-14;RPB=0.835121;SGB=58.0655;VDB=0.252077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.4:31335479 chr04:031335479 0 W/31335479-31335479 FN1707-S SNP A -> T AC=2;AN=188;BQB=0.789257;DP=2176;DP4=358,1780,7,12;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=7.28988e-07;MQSB=2.67749e-13;RPB=0.430623;SGB=-36.9078;VDB=0.219651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.4:31339041 chr04:031339041 0 W/31339041-31339041 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.989011;DP=2615;DP4=1135,1393,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000764818;MQB=3.10478e-07;MQSB=0.78576;RPB=0.396237;SGB=62.7569;VDB=0.218802;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.4:31345109 chr04:031345109 0 W/31345109-31345109 FN1455-S Single Base Substitution A-T INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1115-S.SNP.4:31345965 chr04:031345965 0 W/31345965-31345965 FN1115-S Single Base Substitution G-T INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2326.SNP.4:31356967 chr04:031356967 0 W/31356967-31356967 FN2326 SNP G -> A AC=1;AN=192;BQB=0.907896;DP=4776;DP4=1954,2537,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.35963e-12;MQSB=0.996104;RPB=0.998896;SGB=94.8539;VDB=0.280929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.4:31363936 chr04:031363936 0 W/31363936-31363936 FN3697-S SNP G -> T AC=1;AN=190;BQB=0.873975;DP=2979;DP4=1310,1574,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57328e-11;MQSB=0.92659;RPB=0.941957;SGB=44.0907;VDB=0.97935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.4:31369778 chr04:031369778 0 W/31369778-31369778 FN2378 SNP C -> T AC=1;AN=192;BQB=0.466557;DP=5115;DP4=2460,2313,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.16408e-11;MQSB=0.978031;RPB=0.844238;SGB=-38.3774;VDB=0.899424;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.4:31373763 chr04:031373763 0 W/31373763-31373763 FN4010-S SNP G -> T AC=1;AN=168;BQB=0.863946;DP=2564;DP4=1110,1343,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.48174e-12;MQSB=0.983926;RPB=0.0560631;SGB=34.3388;VDB=0.0731169;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.4:31375356 chr04:031375356 0 W/31375356-31375356 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.905973;DP=2420;DP4=1222,1103,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.69309e-05;MQSB=0.995401;RPB=0.416748;SGB=26.1347;VDB=0.502303;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.4:31377416 chr04:031377416 0 W/31377416-31377416 FN-202 Single Base Substitution C-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2550-S.SNP.4:31381189 chr04:031381189 0 W/31381189-31381189 FN2550-S SNP T -> A AC=1;AN=198;BQB=0.314706;DP=4419;DP4=2203,1981,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.001521;MQSB=0.99747;RPB=0.415176;SGB=-18.0016;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.4:31384340 chr04:031384340 0 W/31384340-31384340 FN1916 Single Base Substitution T-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN3780-S.SNP.4:31387178 chr04:031387178 0 W/31387178-31387178 FN3780-S SNP C -> T AC=2;AN=190;BQB=0.715553;DP=2638;DP4=1210,1334,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.74117e-11;MQSB=0.298153;RPB=0.835995;SGB=103.742;VDB=0.475379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1727-S.SNP.4:31401153 chr04:031401153 0 W/31401153-31401153 FN1727-S SNP C -> G AC=1;AN=188;BQB=0.411781;DP=3347;DP4=1686,1626,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29682e-08;MQSB=0.86811;RPB=0.843667;SGB=-13.9132;VDB=0.269073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.4:31412998 chr04:031412998 0 W/31412998-31412998 FN3610-S SNP A -> G AC=1;AN=190;BQB=0.977158;DP=2799;DP4=1307,1371,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88542e-06;MQSB=0.950254;RPB=0.451551;SGB=35.4339;VDB=0.414654;EFF=SPLICE_SITE_REGION(LOW||||222|LOC_Os04g52760|protein_coding|CODING|LOC_Os04g52760.1|7|1),INTRON(MODIFIER||||222|LOC_Os04g52760|protein_coding|CODING|LOC_Os04g52760.1|7|1) FN-202.SNP.4:31413523 chr04:031413523 0 W/31413523-31413523 FN-202 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g52760 gamma-soluble NSF attachment protein, putative, expressed SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3958-S.SNP.4:31419621 chr04:031419621 0 W/31419621-31419621 FN3958-S SNP A -> G AC=1;AN=168;BQB=0.801237;DP=2669;DP4=1317,1164,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.28186e-07;MQSB=0.000436003;RPB=0.557259;SGB=47.7421;VDB=0.146167;EFF=INTRON(MODIFIER||||181|LOC_Os04g52770|protein_coding|CODING|LOC_Os04g52770.1|7|1) FN3871-S.SNP.4:31420859 chr04:031420859 0 W/31420859-31420859 FN3871-S SNP G -> A AC=2;AN=158;BQB=0.566378;DP=2914;DP4=1410,1357,11,16;HOB=0.024996;ICB=0.493752;MQ=43;MQ0F=0;MQB=4.56086e-05;MQSB=0.0314418;RPB=0.371984;SGB=18.5195;VDB=0.184973;EFF=UTR_3_PRIME(MODIFIER||352||1183|LOC_Os04g52780|protein_coding|CODING|LOC_Os04g52780.1|2|1) FN487-S.SNP.4:31420928 chr04:031420928 0 W/31420928-31420928 FN487-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. W475-4-2.SNP.4:31425606 chr04:031425606 0 W/31425606-31425606 W475-4-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. W475-4-2.SNP.4:31425608 chr04:031425608 0 W/31425608-31425608 W475-4-2 Single Base Substitution T-A INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN4129-S.SNP.4:31426730 chr04:031426730 0 W/31426730-31426730 FN4129-S SNP C -> T AC=2;AN=182;BQB=0.982846;DP=2793;DP4=1810,848,21,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.63625e-16;MQSB=0.507758;RPB=0.979464;SGB=125.307;VDB=0.762578;EFF=INTERGENIC(MODIFIER||||||||||1) FN-30.SNP.4:31431238 chr04:031431238 0 W/31431238-31431238 FN-30 Single Base Substitution C-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2575-S.SNP.4:31431238 chr04:031431238 0 W/31431238-31431238 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.762212;DP=3731;DP4=2020,1275,19,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=5.66034e-14;MQSB=0.00158747;RPB=0.767648;SGB=68.2711;VDB=0.0160221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.4:31431238 chr04:031431238 0 W/31431238-31431238 FN3454-S SNP C -> T AC=2;AN=184;BQB=0.84427;DP=1647;DP4=1378,201,16,2;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=9.46828e-08;MQSB=7.471e-16;RPB=0.756033;SGB=53.3568;VDB=0.443785;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.4:31431238 chr04:031431238 0 W/31431238-31431238 FN723-S Single Base Substitution C-T INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN4204-S.SNP.4:31433841 chr04:031433841 0 W/31433841-31433841 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.952835;DP=2897;DP4=1355,1406,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.9578e-06;MQSB=0.83557;RPB=0.499597;SGB=27.9928;VDB=0.0641963;EFF=INTERGENIC(MODIFIER||||||||||1) 707-2.SNP.4:31436986 chr04:031436986 0 W/31436986-31436986 707-2 Single Base Substitution T-C INTERGENIC Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. FN2326.SNP.4:31454553 chr04:031454553 0 W/31454553-31454553 FN2326 SNP T -> A AC=1;AN=192;BQB=0.819834;DP=5472;DP4=2185,3072,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.00896e-11;MQSB=0.176369;RPB=0.975006;SGB=51.9931;VDB=0.756312;EFF=INTERGENIC(MODIFIER||||||||||1) FN-48.SNP.4:31457990 chr04:031457990 0 W/31457990-31457990 FN-48 Single Base Substitution G-A INTERGENIC Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3910-S.SNP.4:31465063 chr04:031465063 0 W/31465063-31465063 FN3910-S SNP T -> A AC=1;AN=158;BQB=0.881744;DP=2437;DP4=1188,1173,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.000111842;MQSB=0.138187;RPB=0.8027;SGB=17.2267;VDB=0.691871;EFF=SPLICE_SITE_REGION(LOW||||372|LOC_Os04g52840|protein_coding|CODING|LOC_Os04g52840.1|2|1),SPLICE_SITE_REGION(LOW||||277|LOC_Os04g52840|protein_coding|CODING|LOC_Os04g52840.2|2|1),UTR_5_PRIME(MODIFIER||60||372|LOC_Os04g52840|protein_coding|CODING|LOC_Os04g52840.1|2|1),UTR_5_PRIME(MODIFIER||60||277|LOC_Os04g52840|protein_coding|CODING|LOC_Os04g52840.2|2|1) FN3753-S.SNP.4:31472391 chr04:031472391 0 W/31472391-31472391 FN3753-S SNP A -> G AC=1;AN=190;BQB=0.90849;DP=3237;DP4=1422,1501,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0;MQB=5.94139e-06;MQSB=0.0149409;RPB=0.0768548;SGB=53.8699;VDB=0.240374;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.4:31493976 chr04:031493976 0 W/31493976-31493976 FN-192 Single Base Substitution C-G INTRON HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2180-S.SNP.4:31507268 chr04:031507268 0 W/31507268-31507268 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.938063;DP=4888;DP4=2408,2168,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04256e-14;MQSB=0.0240377;RPB=0.963788;SGB=89.4087;VDB=0.594236;EFF=INTRON(MODIFIER||||1628|LOC_Os04g52900|protein_coding|CODING|LOC_Os04g52900.1|20|1),INTRON(MODIFIER||||1415|LOC_Os04g52900|protein_coding|CODING|LOC_Os04g52900.2|21|1) FN1053-S.SNP.4:31524906 chr04:031524906 0 W/31524906-31524906 FN1053-S Single Base Substitution G-A INTRON HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. W23-2-1.SNP.4:31528605 chr04:031528605 0 W/31528605-31528605 W23-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN1577-S.SNP.4:31529212 chr04:031529212 0 W/31529212-31529212 FN1577-S Single Base Substitution G-A INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1175-S.SNP.4:31530372 chr04:031530372 0 W/31530372-31530372 FN1175-S Single Base Substitution T-C INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN389-S.SNP.4:31533820 chr04:031533820 0 W/31533820-31533820 FN389-S Single Base Substitution T-A INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3746-S.SNP.4:31537848 chr04:031537848 0 W/31537848-31537848 FN3746-S SNP T -> G AC=1;AN=190;BQB=0.999185;DP=2841;DP4=1449,1267,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.24196e-10;MQSB=0.979172;RPB=0.686344;SGB=71.8647;VDB=0.480398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L378V|776|LOC_Os04g52940|protein_coding|CODING|LOC_Os04g52940.1|14|1) FN3316-S.SNP.4:31551545 chr04:031551545 0 W/31551545-31551545 FN3316-S SNP T -> C AC=1;AN=184;BQB=0.445659;DP=3891;DP4=1987,1781,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93645e-07;MQSB=0.935711;RPB=0.882424;SGB=49.835;VDB=0.187865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.4:31558423 chr04:031558423 0 W/31558423-31558423 FN2112-S SNP T -> A AC=1;AN=168;BQB=0.690919;DP=2375;DP4=1242,1094,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.63703e-13;MQSB=0.831811;RPB=0.474574;SGB=100.912;VDB=0.0413492;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.4:31569228 chr04:031569228 0 W/31569228-31569228 FN923-S Single Base Substitution G-A INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN3681-S.SNP.4:31582434 chr04:031582434 0 W/31582434-31582434 FN3681-S SNP T -> G AC=1;AN=190;BQB=0.921933;DP=2937;DP4=1435,1366,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40428e-08;MQSB=0.990639;RPB=0.906492;SGB=71.8647;VDB=0.372961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L1397R|1715|LOC_Os04g53030|protein_coding|CODING|LOC_Os04g53030.1|4|1) FN2485.SNP.4:31585635 chr04:031585635 0 W/31585635-31585635 FN2485 SNP T -> A AC=1;AN=200;BQB=0.218429;DP=4256;DP4=2007,2027,16,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02006e-08;MQSB=0.401259;RPB=0.93837;SGB=11.0951;VDB=0.050263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.4:31585635 chr04:031585635 0 W/31585635-31585635 FN2784-S SNP T -> A AC=1;AN=198;BQB=0.995261;DP=3984;DP4=1775,2002,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.04068e-12;MQSB=0.229927;RPB=0.809016;SGB=-75.2793;VDB=0.0387871;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.4:31585876 chr04:031585876 0 W/31585876-31585876 FN-156 Single Base Substitution C-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN1302-S.SNP.4:31586250 chr04:031586250 0 W/31586250-31586250 FN1302-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1514-S.SNP.4:31587898 chr04:031587898 0 W/31587898-31587898 FN1514-S Single Base Substitution C-T INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2408.SNP.4:31615334 chr04:031615334 0 W/31615334-31615334 FN2408 SNP G -> A AC=1;AN=200;BQB=0.997602;DP=4423;DP4=2414,1597,7,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000226091;MQB=0.000237112;MQSB=3.54611e-10;RPB=0.779948;SGB=13.8539;VDB=0.808624;EFF=INTERGENIC(MODIFIER||||||||||1) FN960-S.SNP.4:31617483 chr04:031617483 0 W/31617483-31617483 FN960-S Single Base Substitution G-T INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN2477.SNP.4:31627700 chr04:031627700 0 W/31627700-31627700 FN2477 SNP C -> A AC=2;AN=200;BQB=0.916497;DP=3032;DP4=1464,1280,16,10;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=9.6652e-11;MQSB=1.0485e-26;RPB=0.917719;SGB=114.132;VDB=0.132202;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.4:31631014 chr04:031631014 0 W/31631014-31631014 FN743-S Single Base Substitution G-A INTRON HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2572-S.SNP.4:31631914 chr04:031631914 0 W/31631914-31631914 FN2572-S SNP T -> C AC=1;AN=198;BQB=0.246116;DP=4144;DP4=2031,1906,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4836e-09;MQSB=0.671546;RPB=0.683602;SGB=50.9344;VDB=0.977212;EFF=INTRON(MODIFIER||||111|LOC_Os04g53110|protein_coding|CODING|LOC_Os04g53110.1|3|1) FN2555-S.SNP.4:31634635 chr04:031634635 0 W/31634635-31634635 FN2555-S SNP A -> T AC=1;AN=198;BQB=0.8609;DP=4290;DP4=2448,1573,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.7572e-12;MQSB=0.998896;RPB=0.859534;SGB=47.5102;VDB=0.845604;EFF=INTERGENIC(MODIFIER||||||||||1) FN-327.SNP.4:31653128 chr04:031653128 0 W/31653128-31653128 FN-327 Single Base Substitution G-T STOP_GAINED HET LOC_Os04g53150 peptidase aspartic family protein, putative, expressed SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN912-S.SNP.4:31654324 chr04:031654324 0 W/31654324-31654324 FN912-S Single Base Substitution T-C INTRON HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2630-S.SNP.4:31659484 chr04:031659484 0 W/31659484-31659484 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.980652;DP=5122;DP4=2348,2446,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16137e-19;MQSB=0.964016;RPB=0.999393;SGB=36.7778;VDB=0.755538;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R873|1821|LOC_Os04g53160|protein_coding|CODING|LOC_Os04g53160.1|3|1) FN824-S.SNP.4:31665116 chr04:031665116 0 W/31665116-31665116 FN824-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1104-S.SNP.4:31673245 chr04:031673245 0 W/31673245-31673245 FN1104-S Single Base Substitution G-A INTRON HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2681-S.SNP.4:31678808 chr04:031678808 0 W/31678808-31678808 FN2681-S SNP A -> G AC=1;AN=200;BQB=0.971227;DP=5171;DP4=2342,2575,23,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57331e-22;MQSB=0.640833;RPB=0.887774;SGB=94.6142;VDB=0.318237;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.4:31680084 chr04:031680084 0 W/31680084-31680084 FN3708-S SNP A -> T AC=1;AN=190;BQB=0.8921;DP=3218;DP4=1433,1680,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.36222e-07;MQSB=0.521024;RPB=0.952414;SGB=28.9929;VDB=0.472394;EFF=INTRON(MODIFIER||||282|LOC_Os04g53200|protein_coding|CODING|LOC_Os04g53200.1|5|1) FN3714-S.SNP.4:31680269 chr04:031680269 0 W/31680269-31680269 FN3714-S SNP A -> T AC=1;AN=190;BQB=0.999692;DP=3110;DP4=1508,1385,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.06657e-10;MQSB=0.941439;RPB=0.773935;SGB=62.7569;VDB=0.156745;EFF=INTRON(MODIFIER||||282|LOC_Os04g53200|protein_coding|CODING|LOC_Os04g53200.1|5|1) FN3714-S.SNP.4:31680273 chr04:031680273 0 W/31680273-31680273 FN3714-S SNP A -> G AC=1;AN=190;BQB=0.853464;DP=3105;DP4=1541,1355,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56974e-10;MQSB=0.924964;RPB=0.864687;SGB=46.7622;VDB=0.0991356;EFF=INTRON(MODIFIER||||282|LOC_Os04g53200|protein_coding|CODING|LOC_Os04g53200.1|5|1) FN3548-S.SNP.4:31688824 chr04:031688824 0 W/31688824-31688824 FN3548-S SNP G -> T AC=2;AN=188;BQB=0.651706;DP=2634;DP4=1182,1388,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.39966e-10;MQSB=0.995841;RPB=0.936705;SGB=94.4119;VDB=0.19051;EFF=INTRON(MODIFIER||||367|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.1|1|1),INTRON(MODIFIER||||365|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.3|1|1) FN2781-S.SNP.4:31690447 chr04:031690447 0 W/31690447-31690447 FN2781-S SNP T -> A AC=1;AN=198;BQB=0.507729;DP=4372;DP4=1886,2257,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.62144e-09;MQSB=0.379993;RPB=0.368585;SGB=63.3342;VDB=0.776231;EFF=SPLICE_SITE_REGION(LOW||||367|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.1|3|1),SPLICE_SITE_REGION(LOW||||365|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.3|3|1),INTRON(MODIFIER||||367|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.1|3|1),INTRON(MODIFIER||||365|LOC_Os04g53210|protein_coding|CODING|LOC_Os04g53210.3|3|1) FN1215-S.SNP.4:31699167 chr04:031699167 0 W/31699167-31699167 FN1215-S Single Base Substitution T-C INTRON HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2592-S.SNP.4:31704017 chr04:031704017 0 W/31704017-31704017 FN2592-S SNP A -> T AC=1;AN=198;BQB=0.946766;DP=4477;DP4=1902,2380,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000223364;MQB=6.38864e-05;MQSB=0.970428;RPB=0.619855;SGB=54.5295;VDB=0.906702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.4:31707001 chr04:031707001 0 W/31707001-31707001 FN3919-S SNP C -> G AC=2;AN=158;BQB=0.831178;DP=2564;DP4=1582,872,26,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.80418e-19;MQSB=0.97216;RPB=0.627826;SGB=83.0549;VDB=0.815176;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.4:31708417 chr04:031708417 0 W/31708417-31708417 FN404-S Single Base Substitution T-A INTERGENIC HOMO SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN684-S.SNP.4:31709402 chr04:031709402 0 W/31709402-31709402 FN684-S Single Base Substitution C-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1345-S.SNP.4:31710289 chr04:031710289 0 W/31710289-31710289 FN1345-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3890-S.SNP.4:31719592 chr04:031719592 0 W/31719592-31719592 FN3890-S SNP A -> T AC=1;AN=158;BQB=0.997767;DP=2507;DP4=1258,1159,13,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.96713e-13;MQSB=0.907865;RPB=0.379863;SGB=74.5068;VDB=0.205717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:31724454 chr04:031724454 0 W/31724454-31724454 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.812296;DP=3161;DP4=1594,1455,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03128e-07;MQSB=0.766215;RPB=0.592285;SGB=18.4463;VDB=0.588045;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.4:31727622 chr04:031727622 0 W/31727622-31727622 FN-207 Single Base Substitution T-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN4312-S.SNP.4:31731092 chr04:031731092 0 W/31731092-31731092 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.967935;DP=2643;DP4=1340,1246,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.59277e-05;MQSB=0.14466;RPB=0.994847;SGB=30.1021;VDB=0.195133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R110K|832|LOC_Os04g53270|protein_coding|CODING|LOC_Os04g53270.1|1|1) FN2338.SNP.4:31741825 chr04:031741825 0 W/31741825-31741825 FN2338 SNP C -> T AC=2;AN=192;BQB=0.811739;DP=5131;DP4=2527,2256,27,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.0312e-24;MQSB=0.854028;RPB=0.888938;SGB=55.8496;VDB=0.193146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.4:31743501 chr04:031743501 0 W/31743501-31743501 FN3893-S SNP A -> T AC=1;AN=158;BQB=0.943833;DP=2574;DP4=1222,1247,12,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.26684e-12;MQSB=0.85476;RPB=0.67513;SGB=61.029;VDB=0.273814;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.4:31748241 chr04:031748241 0 W/31748241-31748241 FN4063-S SNP T -> A AC=2;AN=168;BQB=0.922262;DP=2774;DP4=1192,1456,14,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44006e-18;MQSB=0.930493;RPB=0.999356;SGB=68.3702;VDB=0.150826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.4:31752415 chr04:031752415 0 W/31752415-31752415 FN2468 SNP C -> A AC=1;AN=200;BQB=0.99095;DP=4859;DP4=2539,2088,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0097e-08;MQSB=0.988865;RPB=0.964106;SGB=21.6694;VDB=0.173557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E1153D|1216|LOC_Os04g53310|protein_coding|CODING|LOC_Os04g53310.1|15|1) FN2588-S.SNP.4:31763689 chr04:031763689 0 W/31763689-31763689 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.815778;DP=3950;DP4=1610,2074,6,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10198e-15;MQSB=0.847428;RPB=0.109271;SGB=94.0758;VDB=0.505265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.4:31764340 chr04:031764340 0 W/31764340-31764340 FN2399 SNP C -> T AC=1;AN=200;BQB=0.959422;DP=4852;DP4=2446,2177,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54766e-11;MQSB=0.983178;RPB=0.883016;SGB=34.6953;VDB=0.881584;EFF=UTR_3_PRIME(MODIFIER||11||376|LOC_Os04g53330|protein_coding|CODING|LOC_Os04g53330.1|5|1),UTR_3_PRIME(MODIFIER||11||376|LOC_Os04g53330|protein_coding|CODING|LOC_Os04g53330.2|5|1) FN588-S.SNP.4:31773283 chr04:031773283 0 W/31773283-31773283 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3727-S.SNP.4:31774865 chr04:031774865 0 W/31774865-31774865 FN3727-S SNP A -> G AC=1;AN=190;BQB=0.722729;DP=2898;DP4=1159,1444,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.89244e-07;MQSB=0.44408;RPB=0.587042;SGB=-54.5347;VDB=0.0496732;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.4:31776303 chr04:031776303 0 W/31776303-31776303 FN-68 Single Base Substitution A-G INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2468.SNP.4:31781545 chr04:031781545 0 W/31781545-31781545 FN2468 SNP G -> A AC=1;AN=200;BQB=0.954251;DP=4451;DP4=2288,1753,6,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000224669;MQB=1.55463e-05;MQSB=0.148686;RPB=0.991022;SGB=47.4799;VDB=0.214627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.4:31805012 chr04:031805012 0 W/31805012-31805012 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.407555;DP=4715;DP4=2206,1992,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.87135e-10;MQSB=0.72011;RPB=0.844211;SGB=61.9006;VDB=0.887808;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.4:31808696 chr04:031808696 0 W/31808696-31808696 FN920-S Single Base Substitution G-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3943-S.SNP.4:31811356 chr04:031811356 0 W/31811356-31811356 FN3943-S SNP T -> C AC=1;AN=168;BQB=0.997518;DP=2444;DP4=1064,1164,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44843e-05;MQSB=0.325437;RPB=0.911912;SGB=34.748;VDB=0.908313;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.4:31823365 chr04:031823365 0 W/31823365-31823365 FN2645-S SNP A -> G AC=2;AN=200;BQB=0.311169;DP=5088;DP4=2366,2460,21,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.00911e-26;MQSB=0.816917;RPB=0.837;SGB=152.03;VDB=0.704191;EFF=UTR_3_PRIME(MODIFIER||162||460|LOC_Os04g53440|protein_coding|CODING|LOC_Os04g53440.1|6|1),UTR_3_PRIME(MODIFIER||162||425|LOC_Os04g53440|protein_coding|CODING|LOC_Os04g53440.2|7|1) FN3491-S.SNP.4:31831061 chr04:031831061 0 W/31831061-31831061 FN3491-S SNP T -> A AC=1;AN=188;BQB=0.81392;DP=2548;DP4=1208,1247,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.36608e-06;MQSB=0.816789;RPB=0.855684;SGB=-2.17824;VDB=0.558524;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.4:31839381 chr04:031839381 0 W/31839381-31839381 FN4201-S SNP A -> C AC=1;AN=170;BQB=0.609636;DP=2573;DP4=1248,1233,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02291e-07;MQSB=0.93751;RPB=0.95924;SGB=27.2119;VDB=0.522;EFF=INTRON(MODIFIER||||207|LOC_Os04g53470|protein_coding|CODING|LOC_Os04g53470.1|1|1) FN2419.SNP.4:31841904 chr04:031841904 0 W/31841904-31841904 FN2419 SNP C -> A AC=1;AN=200;BQB=0.915332;DP=4117;DP4=2017,1726,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1547e-06;MQSB=0.957727;RPB=0.981541;SGB=21.6694;VDB=0.62814;EFF=UTR_5_PRIME(MODIFIER||2789||207|LOC_Os04g53470|protein_coding|CODING|LOC_Os04g53470.1|1|1) FN1190-S.SNP.4:31844194 chr04:031844194 0 W/31844194-31844194 FN1190-S Single Base Substitution G-A INTRON HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3398-S.SNP.4:31852910 chr04:031852910 0 W/31852910-31852910 FN3398-S SNP A -> G AC=1;AN=184;BQB=0.849306;DP=2921;DP4=1430,1398,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.07603e-10;MQSB=0.984862;RPB=0.823684;SGB=66.8296;VDB=0.449535;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.4:31853709 chr04:031853709 0 W/31853709-31853709 FN824-S Single Base Substitution T-C INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN4189-S.SNP.4:31856452 chr04:031856452 0 W/31856452-31856452 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.994669;DP=2522;DP4=1091,1346,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3314e-09;MQSB=0.982815;RPB=0.82067;SGB=56.7575;VDB=0.907299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R675K|1807|LOC_Os04g53496|protein_coding|CODING|LOC_Os04g53496.1|1|1) FN4189-S.SNP.4:31856453 chr04:031856453 0 W/31856453-31856453 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.952196;DP=2523;DP4=1087,1365,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.28289e-09;MQSB=0.984548;RPB=0.739144;SGB=56.7575;VDB=0.903123;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R675|1807|LOC_Os04g53496|protein_coding|CODING|LOC_Os04g53496.1|1|1) FN4189-S.SNP.4:31856454 chr04:031856454 0 W/31856454-31856454 FN4189-S SNP A -> C AC=1;AN=170;BQB=0.997101;DP=2518;DP4=1101,1358,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.28099e-09;MQSB=0.999689;RPB=0.630221;SGB=56.7575;VDB=0.900985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Cac|N676H|1807|LOC_Os04g53496|protein_coding|CODING|LOC_Os04g53496.1|1|1) FN1758-S.SNP.4:31859700 chr04:031859700 0 W/31859700-31859700 FN1758-S SNP G -> A AC=2;AN=188;BQB=0.284071;DP=3507;DP4=1856,1591,20,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08298e-20;MQSB=0.979977;RPB=0.198258;SGB=-96.8634;VDB=0.720111;EFF=INTRON(MODIFIER||||1807|LOC_Os04g53496|protein_coding|CODING|LOC_Os04g53496.1|3|1) FN-63.SNP.4:31862096 chr04:031862096 0 W/31862096-31862096 FN-63 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g53496 NBS-LRR disease resistance protein, putative, expressed SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN3389-S.SNP.4:31871009 chr04:031871009 0 W/31871009-31871009 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.673231;DP=3344;DP4=1763,1460,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000299043;MQB=0.0120037;MQSB=0.450315;RPB=0.947763;SGB=39.2697;VDB=0.470506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.4:31871192 chr04:031871192 0 W/31871192-31871192 FN3775-S SNP C -> T AC=2;AN=190;BQB=0.562957;DP=2552;DP4=1304,1119,11,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=3.32383e-07;MQSB=0.0144695;RPB=0.890632;SGB=41.5369;VDB=0.366305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.4:31890487 chr04:031890487 0 W/31890487-31890487 FN2398 SNP G -> A AC=1;AN=200;BQB=0.623784;DP=3169;DP4=1274,1563,4,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00410224;MQB=0.000679863;MQSB=0.997628;RPB=0.912716;SGB=40.4492;VDB=0.687582;EFF=INTRON(MODIFIER||||259|LOC_Os04g53520|protein_coding|CODING|LOC_Os04g53520.1|2|1) FN2554-S.SNP.4:31894381 chr04:031894381 0 W/31894381-31894381 FN2554-S SNP A -> C AC=1;AN=198;BQB=0.978211;DP=3509;DP4=1843,1422,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51825e-10;MQSB=0.442809;RPB=0.849992;SGB=10.9445;VDB=0.731042;EFF=INTRON(MODIFIER||||259|LOC_Os04g53520|protein_coding|CODING|LOC_Os04g53520.1|1|1) FN2554-S.SNP.4:31894382 chr04:031894382 0 W/31894382-31894382 FN2554-S SNP T -> A AC=1;AN=198;BQB=0.885633;DP=3495;DP4=1781,1416,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.16928e-09;MQSB=0.237243;RPB=0.99394;SGB=-13.2407;VDB=0.923368;EFF=INTRON(MODIFIER||||259|LOC_Os04g53520|protein_coding|CODING|LOC_Os04g53520.1|1|1) FN3524-S.SNP.4:31894861 chr04:031894861 0 W/31894861-31894861 FN3524-S SNP A -> G AC=2;AN=188;BQB=0.993133;DP=3212;DP4=1504,1525,18,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.52314e-16;MQSB=0.651934;RPB=0.778458;SGB=92.677;VDB=0.111818;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.4:31896360 chr04:031896360 0 W/31896360-31896360 FN4249-S SNP C -> A AC=1;AN=170;BQB=0.931559;DP=2413;DP4=1121,1243,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.24926e-07;MQSB=0.999687;RPB=0.399042;SGB=38.987;VDB=0.467235;EFF=INTRON(MODIFIER||||572|LOC_Os04g53530|protein_coding|CODING|LOC_Os04g53530.1|4|1) FN3974-S.SNP.4:31897561 chr04:031897561 0 W/31897561-31897561 FN3974-S SNP G -> C AC=1;AN=168;BQB=0.951689;DP=2598;DP4=1288,1239,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.88819e-08;MQSB=0.998749;RPB=0.368359;SGB=34.748;VDB=0.836523;EFF=INTRON(MODIFIER||||572|LOC_Os04g53530|protein_coding|CODING|LOC_Os04g53530.1|8|1) FN690-S.SNP.4:31903394 chr04:031903394 0 W/31903394-31903394 FN690-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g53540 homeobox and START domains containing protein, putative, expressed SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3844-S.SNP.4:31909143 chr04:031909143 0 W/31909143-31909143 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.987818;DP=2789;DP4=1275,1263,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.96638e-09;MQSB=0.971888;RPB=0.988284;SGB=-13.7759;VDB=0.519982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.4:31915022 chr04:031915022 0 W/31915022-31915022 FN2334 SNP A -> G AC=1;AN=192;BQB=0.818407;DP=5243;DP4=2468,2561,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.36519e-07;MQSB=0.561704;RPB=0.769095;SGB=46.9087;VDB=0.940417;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.4:31918520 chr04:031918520 0 W/31918520-31918520 FN-211 Single Base Substitution T-G INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-170.SNP.4:31926780 chr04:031926780 0 W/31926780-31926780 FN-170 Single Base Substitution C-G INTRON HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3815-S.SNP.4:31931227 chr04:031931227 0 W/31931227-31931227 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.963871;DP=3282;DP4=1529,1624,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70336e-05;MQSB=0.965787;RPB=0.117385;SGB=44.5415;VDB=0.0339896;EFF=INTERGENIC(MODIFIER||||||||||1) FN-135.SNP.4:31932053 chr04:031932053 0 W/31932053-31932053 FN-135 Single Base Substitution A-G INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN3661-S.SNP.4:31932083 chr04:031932083 0 W/31932083-31932083 FN3661-S SNP T -> A AC=2;AN=190;BQB=0.803508;DP=2792;DP4=1345,1333,11,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.18698e-15;MQSB=0.815285;RPB=0.41735;SGB=131.065;VDB=0.683677;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.4:31933833 chr04:031933833 0 W/31933833-31933833 FN944-S Single Base Substitution G-C INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1686-S.SNP.4:31939684 chr04:031939684 0 W/31939684-31939684 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.234535;DP=3493;DP4=1581,1806,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=4.13704e-05;MQSB=0.184469;RPB=0.525547;SGB=-69.186;VDB=0.335439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.4:31957690 chr04:031957690 0 W/31957690-31957690 FN2493 SNP A -> G AC=1;AN=200;BQB=0.636916;DP=4872;DP4=2282,2260,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.6882e-08;MQSB=0.886061;RPB=0.92965;SGB=6.27959;VDB=0.60885;EFF=UTR_3_PRIME(MODIFIER||414||173|LOC_Os04g53606|protein_coding|CODING|LOC_Os04g53606.1|1|1) FN1709-S.SNP.4:31961960 chr04:031961960 0 W/31961960-31961960 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.883507;DP=1554;DP4=712,779,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.70216e-05;MQSB=0.783342;RPB=0.513741;SGB=35.9843;VDB=0.432226;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.4:31979227 chr04:031979227 0 W/31979227-31979227 FN1097-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g53660 transposon protein, putative, unclassified, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2210-S.SNP.4:32004390 chr04:032004390 0 W/32004390-32004390 FN2210-S SNP T -> A AC=1;AN=190;BQB=0.731431;DP=4637;DP4=2522,1620,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2488e-05;MQSB=0.91086;RPB=0.799019;SGB=15.9981;VDB=0.928309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E334V|517|LOC_Os04g53700|protein_coding|CODING|LOC_Os04g53700.1|8|1) FN1661-S.SNP.4:32016285 chr04:032016285 0 W/32016285-32016285 FN1661-S Single Base Substitution G-A START_GAINED Homo LOC_Os04g53720 SNF2 family N-terminal domain containing protein, expressed SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2771-S.SNP.4:32017232 chr04:032017232 0 W/32017232-32017232 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.366409;DP=4335;DP4=2063,2044,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.06068e-08;MQSB=0.999344;RPB=0.175491;SGB=16.3688;VDB=0.0172525;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.4:32019232 chr04:032019232 0 W/32019232-32019232 FN4039-S SNP T -> A AC=1;AN=168;BQB=0.998218;DP=2652;DP4=1334,1182,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.66849e-11;MQSB=0.881689;RPB=0.615073;SGB=69.8961;VDB=0.80942;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.4:32019233 chr04:032019233 0 W/32019233-32019233 FN4039-S SNP T -> A AC=1;AN=168;BQB=0.763184;DP=2660;DP4=1349,1186,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.99182e-11;MQSB=0.963139;RPB=0.681655;SGB=9.91396;VDB=0.868655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.4:32019333 chr04:032019333 0 W/32019333-32019333 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.858846;DP=2858;DP4=1337,1430,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05568e-10;MQSB=0.999996;RPB=0.116502;SGB=46.7622;VDB=0.429885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.4:32019336 chr04:032019336 0 W/32019336-32019336 FN3800-S SNP A -> T AC=1;AN=190;BQB=0.98424;DP=2870;DP4=1321,1451,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.77797e-09;MQSB=0.999589;RPB=0.0992375;SGB=43.2083;VDB=0.635451;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.4:32039654 chr04:032039654 0 W/32039654-32039654 FN1300-S Single Base Substitution G-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2638-S.SNP.4:32042814 chr04:032042814 0 W/32042814-32042814 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.999018;DP=4487;DP4=2142,2037,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.57523e-08;MQSB=0.999438;RPB=0.714652;SGB=-13.7154;VDB=0.437427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.4:32043058 chr04:032043058 0 W/32043058-32043058 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.990255;DP=4204;DP4=2222,1796,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=0.000654074;MQSB=0.473433;RPB=0.541427;SGB=40.149;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.4:32044354 chr04:032044354 0 W/32044354-32044354 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.857192;DP=4900;DP4=2443,2215,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.46717e-07;MQSB=0.991169;RPB=0.476689;SGB=54.2646;VDB=0.982866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R185H|837|LOC_Os04g53770|protein_coding|CODING|LOC_Os04g53770.1|2|1) FN3508-S.SNP.4:32045867 chr04:032045867 0 W/32045867-32045867 FN3508-S SNP A -> T AC=1;AN=188;BQB=0.999221;DP=2823;DP4=1486,1218,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.02493e-10;MQSB=0.996321;RPB=0.725479;SGB=50.1574;VDB=0.229853;EFF=INTRON(MODIFIER||||837|LOC_Os04g53770|protein_coding|CODING|LOC_Os04g53770.1|7|1) FN-169.SNP.4:32049011 chr04:032049011 0 W/32049011-32049011 FN-169 Single Base Substitution C-A INTERGENIC HOMO SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN418-S.SNP.4:32059465 chr04:032059465 0 W/32059465-32059465 FN418-S Single Base Substitution C-G INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1269-S.SNP.4:32060142 chr04:032060142 0 W/32060142-32060142 FN1269-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os04g53800 leucoanthocyanidin reductase, putative, expressed SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN-189.SNP.4:32063884 chr04:032063884 0 W/32063884-32063884 FN-189 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1195-S.SNP.4:32079662 chr04:032079662 0 W/32079662-32079662 FN1195-S Single Base Substitution C-A INTRON HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1472-S.SNP.4:32143839 chr04:032143839 0 W/32143839-32143839 FN1472-S Single Base Substitution G-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2581-S.SNP.4:32148024 chr04:032148024 0 W/32148024-32148024 FN2581-S SNP C -> T AC=2;AN=198;BQB=0.632074;DP=3895;DP4=1935,1761,15,13;HOB=0.019998;ICB=0.495001;MQ=42;MQ0F=0;MQB=1.23297e-07;MQSB=0.448587;RPB=0.318734;SGB=90.4807;VDB=0.91386;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.4:32179167 chr04:032179167 0 W/32179167-32179167 FN413-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g53998 kinase, putative, expressed SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN413-S.SNP.4:32179168 chr04:032179168 0 W/32179168-32179168 FN413-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g53998 kinase, putative, expressed SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN759-S.SNP.4:32181963 chr04:032181963 0 W/32181963-32181963 FN759-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os04g53998 kinase, putative, expressed SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN-298.SNP.4:32201254 chr04:032201254 0 W/32201254-32201254 FN-298 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g54020 receptor-like kinase, putative, expressed SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN757-S.SNP.4:32204038 chr04:032204038 0 W/32204038-32204038 FN757-S Single Base Substitution T-A INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3965-S.SNP.4:32224692 chr04:032224692 0 W/32224692-32224692 FN3965-S SNP C -> T AC=1;AN=168;BQB=0.946108;DP=2323;DP4=1118,1059,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000430478;MQB=2.04442e-09;MQSB=0.884599;RPB=0.957298;SGB=55.3328;VDB=0.485585;EFF=INTRON(MODIFIER||||887|LOC_Os04g54070|protein_coding|CODING|LOC_Os04g54070.1|3|1) FN-217.SNP.4:32227350 chr04:032227350 0 W/32227350-32227350 FN-217 Single Base Substitution C-T INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2246-S.SNP.4:32228610 chr04:032228610 0 W/32228610-32228610 FN2246-S SNP A -> C AC=1;AN=190;BQB=0.582378;DP=3615;DP4=1609,1774,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000276625;MQB=2.05417e-06;MQSB=0.532167;RPB=0.993673;SGB=10.8904;VDB=0.0551501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.4:32233258 chr04:032233258 0 W/32233258-32233258 FN2241-S SNP A -> G AC=1;AN=190;BQB=0.462426;DP=5027;DP4=2294,2455,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81101e-07;MQSB=0.996467;RPB=0.224505;SGB=43.2083;VDB=0.604541;EFF=INTRON(MODIFIER||||832|LOC_Os04g54080|protein_coding|CODING|LOC_Os04g54080.1|1|1) FN2711-S.SNP.4:32238116 chr04:032238116 0 W/32238116-32238116 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.931033;DP=4811;DP4=2055,2525,6,12;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0;MQB=0.00540379;MQSB=0.443496;RPB=0.49918;SGB=54.6902;VDB=0.766256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.4:32258781 chr04:032258781 0 W/32258781-32258781 FN2454 SNP G -> A AC=1;AN=200;BQB=0.86915;DP=4753;DP4=2412,2172,7,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.00207276;MQSB=0.0422306;RPB=0.999342;SGB=58.8698;VDB=0.978929;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.4:32260180 chr04:032260180 0 W/32260180-32260180 FN2214-S SNP G -> T AC=1;AN=190;BQB=0.0438785;DP=4439;DP4=2019,2156,18,27;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000225276;MQB=1.23949e-18;MQSB=2.01619e-09;RPB=0.000223465;SGB=-642.953;VDB=0.662862;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G33*|780|LOC_Os04g54150|protein_coding|CODING|LOC_Os04g54150.1|1|1);LOF=(LOC_Os04g54150|LOC_Os04g54150|1|1.00);NMD=(LOC_Os04g54150|LOC_Os04g54150|1|1.00) FN838-S.SNP.4:32263389 chr04:032263389 0 W/32263389-32263389 FN838-S Single Base Substitution G-T INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2293.SNP.4:32273567 chr04:032273567 0 W/32273567-32273567 FN2293 SNP C -> G AC=2;AN=192;BQB=0.783561;DP=4791;DP4=2198,2301,26,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.45027e-20;MQSB=0.970793;RPB=0.0166825;SGB=49.5922;VDB=0.345094;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L712|781|LOC_Os04g54180|protein_coding|CODING|LOC_Os04g54180.1|6|1) FN3807-S.SNP.4:32282677 chr04:032282677 0 W/32282677-32282677 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.0401068;DP=2427;DP4=1127,1146,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.94156e-05;MQSB=0.839337;RPB=0.997834;SGB=26.2136;VDB=0.998761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.4:32291668 chr04:032291668 0 W/32291668-32291668 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN727-S.SNP.4:32294151 chr04:032294151 0 W/32294151-32294151 FN727-S Single Base Substitution G-A INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN_829-2-5.SNP.4:32300779 chr04:032300779 0 W/32300779-32300779 FN_829-2-5 Single Base Substitution G-C HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN-231.SNP.4:32347307 chr04:032347307 0 W/32347307-32347307 FN-231 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g54340 double-strand break repair protein MRE11, putative, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN468-S.SNP.4:32353271 chr04:032353271 0 W/32353271-32353271 FN468-S Single Base Substitution G-T INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2555-S.SNP.4:32362850 chr04:032362850 0 W/32362850-32362850 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.867227;DP=2297;DP4=1795,417,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.15518e-06;MQSB=0.511493;RPB=0.804818;SGB=40.3588;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.4:32366394 chr04:032366394 0 W/32366394-32366394 FN3748-S SNP T -> C AC=2;AN=190;BQB=0.829105;DP=2972;DP4=1506,1353,18,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.09851e-16;MQSB=0.931172;RPB=0.926254;SGB=131.065;VDB=0.909885;EFF=INTRON(MODIFIER||||644|LOC_Os04g54400|protein_coding|CODING|LOC_Os04g54400.1|1|1) FN1657-S.SNP.4:32368263 chr04:032368263 0 W/32368263-32368263 FN1657-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os04g54400 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1411-S.SNP.4:32376063 chr04:032376063 0 W/32376063-32376063 FN1411-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g54410 expressed protein SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2209-S.SNP.4:32393149 chr04:032393149 0 W/32393149-32393149 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.851459;DP=5137;DP4=2348,2310,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.2589e-06;MQSB=0.719329;RPB=0.780813;SGB=-38.5551;VDB=0.525655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.4:32420949 chr04:032420949 0 W/32420949-32420949 FN3285-S SNP G -> T AC=2;AN=184;BQB=0.594145;DP=2668;DP4=1236,1330,17,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.31901e-14;MQSB=0.938462;RPB=0.999694;SGB=130.135;VDB=0.101212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G338V|691|LOC_Os04g54500|protein_coding|CODING|LOC_Os04g54500.1|4|1) FN2465.SNP.4:32430604 chr04:032430604 0 W/32430604-32430604 FN2465 SNP C -> T AC=1;AN=200;BQB=0.998779;DP=3473;DP4=1872,1389,13,5;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0751512;MQB=0.101818;MQSB=5.21698e-18;RPB=0.462613;SGB=9.48993;VDB=0.0364728;EFF=INTRON(MODIFIER||||247|LOC_Os04g54520|protein_coding|CODING|LOC_Os04g54520.1|2|1) FN3412-S.SNP.4:32457152 chr04:032457152 0 W/32457152-32457152 FN3412-S SNP C -> G AC=1;AN=184;BQB=0.856704;DP=3378;DP4=1866,1363,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98143e-14;MQSB=0.952162;RPB=0.997208;SGB=98.4821;VDB=0.374252;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Gct|P31A|193|LOC_Os04g54580|protein_coding|CODING|LOC_Os04g54580.1|1|1) FN-136.SNP.4:32463737 chr04:032463737 0 W/32463737-32463737 FN-136 Single Base Substitution G-A INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-136.SNP.4:32463738 chr04:032463738 0 W/32463738-32463738 FN-136 Single Base Substitution T-A INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1453-S.SNP.4:32465768 chr04:032465768 0 W/32465768-32465768 FN1453-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN3552-S.SNP.4:32466277 chr04:032466277 0 W/32466277-32466277 FN3552-S SNP A -> C AC=1;AN=188;BQB=0.969751;DP=2451;DP4=1319,1045,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.22339e-05;MQSB=0.999724;RPB=0.361923;SGB=35.3493;VDB=0.176359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.4:32472185 chr04:032472185 0 W/32472185-32472185 FN2573-S SNP G -> T AC=1;AN=198;BQB=0.876552;DP=4408;DP4=1946,2262,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.36048e-07;MQSB=0.940001;RPB=0.999841;SGB=40.3588;VDB=0.263754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.4:32472186 chr04:032472186 0 W/32472186-32472186 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.504566;DP=4418;DP4=1944,2285,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02173e-08;MQSB=0.878755;RPB=0.737582;SGB=1.37381;VDB=0.52806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:32473538 chr04:032473538 0 W/32473538-32473538 FN3516-S SNP T -> G AC=1;AN=188;BQB=0.944183;DP=3061;DP4=1588,1400,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000507663;MQSB=0.711021;RPB=0.354981;SGB=35.3493;VDB=0.501755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.4:32477989 chr04:032477989 0 W/32477989-32477989 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.996731;DP=2945;DP4=1610,1231,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.56918e-09;MQSB=0.769585;RPB=0.97614;SGB=71.3514;VDB=0.610216;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.4:32478404 chr04:032478404 0 W/32478404-32478404 FN903-S Single Base Substitution G-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN3709-S.SNP.4:32485105 chr04:032485105 0 W/32485105-32485105 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.869754;DP=2731;DP4=1352,1278,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0607e-09;MQSB=0.799151;RPB=0.661796;SGB=58.2031;VDB=0.987455;EFF=INTRON(MODIFIER||||325|LOC_Os04g54640|protein_coding|CODING|LOC_Os04g54640.1|2|1),INTRON(MODIFIER||||308|LOC_Os04g54640|protein_coding|CODING|LOC_Os04g54640.2|2|1) FN3709-S.SNP.4:32485106 chr04:032485106 0 W/32485106-32485106 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.999795;DP=2737;DP4=1343,1293,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.70657e-08;MQSB=0.814015;RPB=0.997472;SGB=32.5467;VDB=0.968614;EFF=INTRON(MODIFIER||||325|LOC_Os04g54640|protein_coding|CODING|LOC_Os04g54640.1|2|1),INTRON(MODIFIER||||308|LOC_Os04g54640|protein_coding|CODING|LOC_Os04g54640.2|2|1) FN-251.SNP.4:32485714 chr04:032485714 0 W/32485714-32485714 FN-251 Single Base Substitution G-T INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN4172-S.SNP.4:32485714 chr04:032485714 0 W/32485714-32485714 FN4172-S SNP G -> T AC=2;AN=170;BQB=0.999724;DP=2675;DP4=1212,1381,13,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.12557e-12;MQSB=0.998261;RPB=0.880746;SGB=62.4192;VDB=0.928876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.4:32486615 chr04:032486615 0 W/32486615-32486615 FN2558-S SNP G -> T AC=1;AN=198;BQB=0.945867;DP=4165;DP4=1802,2193,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=9.67602e-07;MQSB=0.16578;RPB=0.999991;SGB=49.5489;VDB=0.245345;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.4:32522494 chr04:032522494 0 W/32522494-32522494 FN2086-S SNP C -> T AC=2;AN=168;BQB=0.363225;DP=1343;DP4=386,879,12,19;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0022338;MQB=1.88365e-06;MQSB=0.310368;RPB=0.338807;SGB=29.5739;VDB=0.814497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.4:32522917 chr04:032522917 0 W/32522917-32522917 FN4201-S SNP G -> T AC=1;AN=170;BQB=0.990003;DP=2251;DP4=1124,1057,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00133274;MQB=1.71765e-07;MQSB=0.76104;RPB=0.967648;SGB=70.0854;VDB=0.237226;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1254-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN1254-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN2094-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.959715;DP=1190;DP4=672,474,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000179959;MQSB=0.587342;RPB=0.996989;SGB=47.7421;VDB=0.952086;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN3674-S SNP C -> T AC=1;AN=190;BQB=0.939084;DP=2068;DP4=939,1059,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.11544e-05;MQSB=0.405622;RPB=0.824321;SGB=58.2031;VDB=0.894812;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN447-S Single Base Substitution C-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN738-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN738-S Single Base Substitution C-T INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN805-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN805-S Single Base Substitution C-T INTERGENIC HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN868-S.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 FN868-S Single Base Substitution C-T INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. W450-6-1.SNP.4:32523044 chr04:032523044 0 W/32523044-32523044 W450-6-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN978-S.SNP.4:32540853 chr04:032540853 0 W/32540853-32540853 FN978-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g54710 retrotransposon protein, putative, unclassified, expressed SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1097-S.SNP.4:32542680 chr04:032542680 0 W/32542680-32542680 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3828-S.SNP.4:32545057 chr04:032545057 0 W/32545057-32545057 FN3828-S SNP C -> G AC=2;AN=190;BQB=0.999979;DP=2332;DP4=960,1228,7,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.57225e-09;MQSB=0.87482;RPB=0.962179;SGB=57.4238;VDB=0.049601;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.4:32551330 chr04:032551330 0 W/32551330-32551330 FN547-S Single Base Substitution C-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN547-S.SNP.4:32551333 chr04:032551333 0 W/32551333-32551333 FN547-S Single Base Substitution C-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2734-S.SNP.4:32554406 chr04:032554406 0 W/32554406-32554406 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.999948;DP=5373;DP4=2600,2534,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30681e-09;MQSB=0.864157;RPB=0.979028;SGB=32.0901;VDB=0.205703;EFF=UTR_3_PRIME(MODIFIER||1562||125|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.1|1|1),INTRON(MODIFIER||||78|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.3|1|1),INTRON(MODIFIER||||103|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.2|1|1) FN3362-S.SNP.4:32555463 chr04:032555463 0 W/32555463-32555463 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.962705;DP=2686;DP4=1199,1388,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48509e-05;MQSB=0.997804;RPB=0.713644;SGB=25.1826;VDB=0.443221;EFF=UTR_3_PRIME(MODIFIER||2619||125|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.1|1|1),INTRON(MODIFIER||||78|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.3|1|1),INTRON(MODIFIER||||103|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.2|1|1) FN2592-S.SNP.4:32555991 chr04:032555991 0 W/32555991-32555991 FN2592-S SNP A -> T AC=1;AN=198;BQB=0.885213;DP=4396;DP4=2103,2094,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21181e-13;MQSB=0.995338;RPB=0.995888;SGB=72.5051;VDB=0.892472;EFF=INTRON(MODIFIER||||125|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.1|1|1),INTRON(MODIFIER||||103|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.2|2|1),INTRON(MODIFIER||||78|LOC_Os04g54740|protein_coding|CODING|LOC_Os04g54740.3|2|1) FN1061-S.SNP.4:32556409 chr04:032556409 0 W/32556409-32556409 FN1061-S Single Base Substitution G-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3767-S.SNP.4:32556711 chr04:032556711 0 W/32556711-32556711 FN3767-S SNP C -> T AC=1;AN=190;BQB=0.954061;DP=2848;DP4=1579,1180,1,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57359e-05;MQSB=0.999289;RPB=0.926046;SGB=30.8803;VDB=0.940286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.4:32558053 chr04:032558053 0 W/32558053-32558053 FN2335 SNP G -> A AC=1;AN=192;BQB=0.903218;DP=5445;DP4=2540,2586,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.62301e-16;MQSB=0.800497;RPB=0.728185;SGB=27.6913;VDB=0.511732;EFF=INTRON(MODIFIER||||317|LOC_Os04g54759|protein_coding|CODING|LOC_Os04g54759.1|2|1) FN3537-S.SNP.4:32577057 chr04:032577057 0 W/32577057-32577057 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.997698;DP=2805;DP4=1222,1528,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.39294e-06;MQSB=0.547573;RPB=0.87942;SGB=21.8113;VDB=0.794121;EFF=INTRON(MODIFIER||||720|LOC_Os04g54790|protein_coding|CODING|LOC_Os04g54790.1|6|1) FN2178-S.SNP.4:32580731 chr04:032580731 0 W/32580731-32580731 FN2178-S SNP T -> C AC=1;AN=168;BQB=0.0300019;DP=4125;DP4=2186,1877,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68908e-08;MQSB=0.998772;RPB=0.422752;SGB=-122.918;VDB=0.454614;EFF=INTRON(MODIFIER||||720|LOC_Os04g54790|protein_coding|CODING|LOC_Os04g54790.1|19|1) FN-256.SNP.4:32587673 chr04:032587673 0 W/32587673-32587673 FN-256 Single Base Substitution A-G INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN-210.SNP.4:32591298 chr04:032591298 0 W/32591298-32591298 FN-210 Single Base Substitution C-A INTRON HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3424-S.SNP.4:32598253 chr04:032598253 0 W/32598253-32598253 FN3424-S SNP T -> A AC=1;AN=184;BQB=0.65629;DP=3279;DP4=1551,1636,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24959e-08;MQSB=0.99977;RPB=0.999282;SGB=33.3622;VDB=0.777487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.4:32609337 chr04:032609337 0 W/32609337-32609337 FN2219-S SNP C -> A AC=1;AN=190;BQB=0.938195;DP=4599;DP4=2232,2023,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.56062e-07;MQSB=0.797285;RPB=0.879528;SGB=-15.4375;VDB=0.980131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.4:32616105 chr04:032616105 0 W/32616105-32616105 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.665823;DP=4610;DP4=2078,2295,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.72487e-12;MQSB=0.980499;RPB=0.986423;SGB=77.2904;VDB=0.35087;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S775N|1252|LOC_Os04g54840|protein_coding|CODING|LOC_Os04g54840.1|6|1) FN763-S.SNP.4:32622043 chr04:032622043 0 W/32622043-32622043 FN763-S Single Base Substitution T-C INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3515-S.SNP.4:32625865 chr04:032625865 0 W/32625865-32625865 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.638469;DP=3480;DP4=1976,1431,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.13291e-07;MQSB=0.951284;RPB=0.204011;SGB=67.1521;VDB=0.22877;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I7|971|LOC_Os04g54850|protein_coding|CODING|LOC_Os04g54850.1|1|1) FN1704-S.SNP.4:32631724 chr04:032631724 0 W/32631724-32631724 FN1704-S SNP T -> A AC=1;AN=188;BQB=0.955376;DP=3552;DP4=1618,1889,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.3979e-09;MQSB=0.837483;RPB=0.105904;SGB=28.6195;VDB=0.0368366;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.4:32638862 chr04:032638862 0 W/32638862-32638862 FN798-S Single Base Substitution G-T INTERGENIC HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3782-S.SNP.4:32639773 chr04:032639773 0 W/32639773-32639773 FN3782-S SNP T -> A AC=1;AN=190;BQB=0.275053;DP=2629;DP4=1392,1094,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00348456;MQSB=0.995949;RPB=0.713606;SGB=13.4442;VDB=0.321996;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.4:32655525 chr04:032655525 0 W/32655525-32655525 FN818-S Single Base Substitution A-G INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN1422-S.SNP.4:32657789 chr04:032657789 0 W/32657789-32657789 FN1422-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g54900 bHLH family protein, putative, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1422-S.SNP.4:32657790 chr04:032657790 0 W/32657790-32657790 FN1422-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g54900 bHLH family protein, putative, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2381.SNP.4:32658651 chr04:032658651 0 W/32658651-32658651 FN2381 SNP T -> G AC=1;AN=192;BQB=0.995231;DP=4604;DP4=2406,1971,19,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.32285e-15;MQSB=0.973482;RPB=0.599667;SGB=117.676;VDB=0.861235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.4:32673448 chr04:032673448 0 W/32673448-32673448 FN3893-S SNP G -> T AC=1;AN=158;BQB=0.999543;DP=2632;DP4=1313,1190,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.0591e-09;MQSB=0.997555;RPB=0.938948;SGB=55.806;VDB=0.58437;EFF=INTRON(MODIFIER||||649|LOC_Os04g54930|protein_coding|CODING|LOC_Os04g54930.1|7|1) FN-406.SNP.4:32678850 chr04:032678850 0 W/32678850-32678850 FN-406 Single Base Substitution A-G INTERGENIC HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1513-S.SNP.4:32689492 chr04:032689492 0 W/32689492-32689492 FN1513-S Single Base Substitution A-T INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2597-S.SNP.4:32705236 chr04:032705236 0 W/32705236-32705236 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.998901;DP=3705;DP4=1932,1559,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.11806e-06;MQSB=0.994839;RPB=0.858425;SGB=29.3637;VDB=0.366229;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.4:32705455 chr04:032705455 0 W/32705455-32705455 FN-379 Single Base Substitution G-T INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN901-S.SNP.4:32705677 chr04:032705677 0 W/32705677-32705677 FN901-S Single Base Substitution A-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. 703-3.SNP.4:32708390 chr04:032708390 0 W/32708390-32708390 703-3 Single Base Substitution C-T INTERGENIC Homo SNo: 1452, Mutant_ID: 703-3, Generation: M2, Mutations: 24, Genes: 38, Seed availability: Yes. FN4344-S.SNP.4:32708702 chr04:032708702 0 W/32708702-32708702 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.983941;DP=2025;DP4=766,1217,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.40933e-05;MQSB=0.0717752;RPB=0.427879;SGB=30.1021;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.4:32714081 chr04:032714081 0 W/32714081-32714081 FN889-S Single Base Substitution C-G INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2452.SNP.4:32717800 chr04:032717800 0 W/32717800-32717800 FN2452 SNP A -> T AC=1;AN=200;BQB=0.997172;DP=4717;DP4=2174,2248,3,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.121449;MQSB=3.93975e-07;RPB=0.272137;SGB=31.2392;VDB=0.338107;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G1419|1764|LOC_Os04g55020|protein_coding|CODING|LOC_Os04g55020.1|3|1) FN355-S.SNP.4:32722747 chr04:032722747 0 W/32722747-32722747 FN355-S Single Base Substitution T-G INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN921-S.SNP.4:32724098 chr04:032724098 0 W/32724098-32724098 FN921-S Single Base Substitution T-C INTERGENIC HOMO SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN1726-S.SNP.4:32735243 chr04:032735243 0 W/32735243-32735243 FN1726-S SNP C -> G AC=1;AN=188;BQB=0.88928;DP=3567;DP4=1647,1846,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.47828e-11;MQSB=0.982997;RPB=0.977504;SGB=19.4279;VDB=0.407155;EFF=UTR_3_PRIME(MODIFIER||1567||269|LOC_Os04g55040|protein_coding|CODING|LOC_Os04g55040.1|2|1) FN_N1-116-1.SNP.4:32737832 chr04:032737832 0 W/32737832-32737832 FN_N1-116-1 Single Base Substitution A-G Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1712-S.SNP.4:32747762 chr04:032747762 0 W/32747762-32747762 FN1712-S SNP G -> A AC=2;AN=188;BQB=0.9869;DP=2831;DP4=1780,923,25,11;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.2945e-11;MQSB=0.000428424;RPB=0.370437;SGB=-44.6718;VDB=0.119062;EFF=INTRON(MODIFIER||||326|LOC_Os04g55070|protein_coding|CODING|LOC_Os04g55070.1|2|1) FN542-S.SNP.4:32761336 chr04:032761336 0 W/32761336-32761336 FN542-S Single Base Substitution A-T INTRON HOMO SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1471-S.SNP.4:32761747 chr04:032761747 0 W/32761747-32761747 FN1471-S SNP A -> C AC=2;AN=188;BQB=0.435323;DP=3361;DP4=1436,1890,6,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.49613e-10;MQSB=0.819346;RPB=0.862605;SGB=71.4172;VDB=0.30529;EFF=INTRON(MODIFIER||||442|LOC_Os04g55090|protein_coding|CODING|LOC_Os04g55090.2|2|1),INTRON(MODIFIER||||442|LOC_Os04g55090|protein_coding|CODING|LOC_Os04g55090.1|2|1) FN596-S.SNP.4:32766994 chr04:032766994 0 W/32766994-32766994 FN596-S Single Base Substitution C-T INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN-177.SNP.4:32768385 chr04:032768385 0 W/32768385-32768385 FN-177 Single Base Substitution G-A INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN3469-S.SNP.4:32774021 chr04:032774021 0 W/32774021-32774021 FN3469-S SNP G -> T AC=1;AN=184;BQB=0.996497;DP=4065;DP4=1610,2331,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.75831e-13;MQSB=0.888461;RPB=0.734415;SGB=98.4821;VDB=0.739916;EFF=UTR_3_PRIME(MODIFIER||56||188|LOC_Os04g55120|protein_coding|CODING|LOC_Os04g55120.1|1|1) FN2496.SNP.4:32781639 chr04:032781639 0 W/32781639-32781639 FN2496 SNP C -> T AC=2;AN=200;BQB=0.946466;DP=4926;DP4=2229,2435,18,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00527812;MQB=4.46585e-13;MQSB=0.00560636;RPB=0.5224;SGB=146.368;VDB=0.485322;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W1002*|1181|LOC_Os04g55140|protein_coding|CODING|LOC_Os04g55140.1|4|1) FN-241.SNP.4:32789740 chr04:032789740 0 W/32789740-32789740 FN-241 Single Base Substitution T-C INTRON HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1655-S.SNP.4:32790046 chr04:032790046 0 W/32790046-32790046 FN1655-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os04g55150 UBA/TS-N domain containing protein, expressed SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2676-S.SNP.4:32794382 chr04:032794382 0 W/32794382-32794382 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.411775;DP=4998;DP4=2632,2093,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3712e-07;MQSB=0.925369;RPB=0.37077;SGB=36.6644;VDB=0.720447;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.4:32798524 chr04:032798524 0 W/32798524-32798524 FN1192-S Single Base Substitution G-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3598-S.SNP.4:32800120 chr04:032800120 0 W/32800120-32800120 FN3598-S SNP T -> A AC=2;AN=188;BQB=0.972692;DP=2877;DP4=1457,1327,10,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.19433e-16;MQSB=0.99438;RPB=0.35249;SGB=78.5038;VDB=0.398746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.4:32800121 chr04:032800121 0 W/32800121-32800121 FN3598-S SNP A -> T AC=2;AN=188;BQB=0.725327;DP=2878;DP4=1454,1324,10,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.64646e-15;MQSB=0.989961;RPB=0.452537;SGB=98.9552;VDB=0.26776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.4:32800245 chr04:032800245 0 W/32800245-32800245 FN1760-S SNP A -> G AC=1;AN=188;BQB=0.332984;DP=3231;DP4=1485,1700,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.65129e-08;MQSB=0.990573;RPB=0.624513;SGB=-63.3592;VDB=0.544948;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.4:32801955 chr04:032801955 0 W/32801955-32801955 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.949853;DP=2483;DP4=1312,1073,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.0985e-07;MQSB=0.866067;RPB=0.983134;SGB=38.3284;VDB=0.346864;EFF=INTRON(MODIFIER||||392|LOC_Os04g55180|protein_coding|CODING|LOC_Os04g55180.1|11|1) FN2670-S.SNP.4:32809454 chr04:032809454 0 W/32809454-32809454 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.872524;DP=4911;DP4=2349,2299,17,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3483e-24;MQSB=0.876067;RPB=0.310789;SGB=92.009;VDB=0.507133;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S527*|992|LOC_Os04g55190|protein_coding|CODING|LOC_Os04g55190.1|6|1);LOF=(LOC_Os04g55190|LOC_Os04g55190|1|1.00);NMD=(LOC_Os04g55190|LOC_Os04g55190|1|1.00) FN1175-S.SNP.4:32813990 chr04:032813990 0 W/32813990-32813990 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4185-S.SNP.4:32814069 chr04:032814069 0 W/32814069-32814069 FN4185-S SNP T -> G AC=1;AN=170;BQB=0.981389;DP=2615;DP4=1272,1293,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.80683e-10;MQSB=0.9713;RPB=0.937457;SGB=65.6427;VDB=0.86937;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.4:32815961 chr04:032815961 0 W/32815961-32815961 FN427-S Single Base Substitution C-T INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-83.SNP.4:32818854 chr04:032818854 0 W/32818854-32818854 FN-83 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os04g55200 coatomer subunit epsilon, putative, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3983-S.SNP.4:32821985 chr04:032821985 0 W/32821985-32821985 FN3983-S SNP C -> A AC=1;AN=168;BQB=0.969466;DP=2405;DP4=1185,1131,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.84612e-09;MQSB=0.93675;RPB=0.927168;SGB=19.7539;VDB=0.162373;EFF=INTRON(MODIFIER||||808|LOC_Os04g55210|protein_coding|CODING|LOC_Os04g55210.1|3|1) FN1575-S.SNP.4:32824114 chr04:032824114 0 W/32824114-32824114 FN1575-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g55210 chloride channel protein, putative, expressed SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3838-S.SNP.4:32825756 chr04:032825756 0 W/32825756-32825756 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.937163;DP=2548;DP4=823,1605,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59034e-10;MQSB=0.350633;RPB=0.839031;SGB=50.3161;VDB=0.47161;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.4:32833542 chr04:032833542 0 W/32833542-32833542 FN-386 Single Base Substitution C-G INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN4229-S.SNP.4:32836250 chr04:032836250 0 W/32836250-32836250 FN4229-S SNP A -> G AC=1;AN=170;BQB=0.976445;DP=2779;DP4=1349,1365,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.68974e-08;MQSB=0.928226;RPB=0.286667;SGB=47.8722;VDB=0.824093;EFF=INTRON(MODIFIER||||1720|LOC_Os04g55230|protein_coding|CODING|LOC_Os04g55230.1|2|1) FN1433-S.SNP.4:32838394 chr04:032838394 0 W/32838394-32838394 FN1433-S Single Base Substitution G-A INTRON HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN3296-S.SNP.4:32853348 chr04:032853348 0 W/32853348-32853348 FN3296-S SNP C -> T AC=2;AN=184;BQB=0.792574;DP=2925;DP4=1514,1308,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.78264e-10;MQSB=0.999589;RPB=0.469698;SGB=14.4113;VDB=0.108926;EFF=UTR_5_PRIME(MODIFIER||468||202|LOC_Os04g55240|protein_coding|CODING|LOC_Os04g55240.1|1|1) FN3549-S.SNP.4:32863993 chr04:032863993 0 W/32863993-32863993 FN3549-S SNP G -> A AC=1;AN=188;BQB=0.354665;DP=2981;DP4=1045,1871,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00113118;MQSB=0.987758;RPB=0.262164;SGB=39.8925;VDB=0.597417;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E108K|182|LOC_Os04g55270|protein_coding|CODING|LOC_Os04g55270.1|1|1) FN4106-S.SNP.4:32879358 chr04:032879358 0 W/32879358-32879358 FN4106-S SNP T -> C AC=1;AN=182;BQB=0.982965;DP=3345;DP4=1870,1416,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.0932735;MQB=0.0511004;MQSB=3.78513e-05;RPB=0.982721;SGB=25.0952;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.4:32882082 chr04:032882082 0 W/32882082-32882082 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.987836;DP=3932;DP4=2375,1431,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.282808;MQB=0.43264;MQSB=7.41567e-17;RPB=0.158014;SGB=44.4357;VDB=0.709568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.4:32885173 chr04:032885173 0 W/32885173-32885173 FN1470-S Single Base Substitution G-C INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.4:32886026 chr04:032886026 0 W/32886026-32886026 FN1470-S Single Base Substitution C-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN4106-S.SNP.4:32895276 chr04:032895276 0 W/32895276-32895276 FN4106-S SNP G -> T AC=1;AN=182;BQB=0.537674;DP=2553;DP4=1493,992,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0097924;MQB=0.830817;MQSB=0;RPB=0.429541;SGB=42.6494;VDB=0.747415;EFF=INTRON(MODIFIER||||196|LOC_Os04g55310|protein_coding|CODING|LOC_Os04g55310.1|1|1) FN1669-S.SNP.4:32899185 chr04:032899185 0 W/32899185-32899185 FN1669-S SNP G -> T AC=1;AN=188;BQB=0.0582404;DP=2456;DP4=1207,1199,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.021987;MQB=0.00316186;MQSB=8.68209e-10;RPB=0.171702;SGB=-58.9891;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.4:32899475 chr04:032899475 0 W/32899475-32899475 FN3495-S SNP C -> T AC=1;AN=188;BQB=0.610581;DP=3235;DP4=1265,1879,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00123648;MQB=1.2361e-06;MQSB=0.524611;RPB=0.320597;SGB=23.5329;VDB=0.579506;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.4:32913828 chr04:032913828 0 W/32913828-32913828 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3825-S.SNP.4:32915208 chr04:032915208 0 W/32915208-32915208 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.483806;DP=2897;DP4=1561,1227,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0583362;MQB=0.294181;MQSB=4.4624e-08;RPB=0.163808;SGB=49.0954;VDB=0.409934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.4:32918719 chr04:032918719 0 W/32918719-32918719 FN1646-S Single Base Substitution T-A INTRON HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2229-S.SNP.4:32922725 chr04:032922725 0 W/32922725-32922725 FN2229-S SNP A -> G AC=1;AN=190;BQB=0.824968;DP=5458;DP4=2698,2463,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.228289;MQB=0.0675675;MQSB=0;RPB=0.98935;SGB=92.9626;VDB=0.594839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.4:32924586 chr04:032924586 0 W/32924586-32924586 FN3423-S SNP C -> A AC=1;AN=184;BQB=0.659168;DP=5758;DP4=3050,2352,17,14;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.179229;MQB=0.108577;MQSB=0;RPB=0.910906;SGB=63.6237;VDB=0.445048;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T107|405|LOC_Os04g55350|protein_coding|CODING|LOC_Os04g55350.1|1|1) FN1473-S.SNP.4:32928482 chr04:032928482 0 W/32928482-32928482 FN1473-S Single Base Substitution A-G INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN1715-S.SNP.4:32930490 chr04:032930490 0 W/32930490-32930490 FN1715-S SNP G -> A AC=2;AN=188;BQB=0.265425;DP=3792;DP4=1879,1848,34,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.02087e-24;MQSB=0.966023;RPB=0.865609;SGB=-52.4358;VDB=0.99034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.4:32934422 chr04:032934422 0 W/32934422-32934422 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.587222;DP=4423;DP4=1934,2204,9,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.3339e-17;MQSB=0.999844;RPB=0.532451;SGB=90.4807;VDB=0.364024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S129F|370|LOC_Os04g55360|protein_coding|CODING|LOC_Os04g55360.1|3|1) FN1606-S.SNP.4:32960967 chr04:032960967 0 W/32960967-32960967 FN1606-S Single Base Substitution A-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1606-S.SNP.4:32960968 chr04:032960968 0 W/32960968-32960968 FN1606-S Single Base Substitution C-A INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN726-S.SNP.4:32962088 chr04:032962088 0 W/32962088-32962088 FN726-S Single Base Substitution C-T INTERGENIC HOMO SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3835-S.SNP.4:32970255 chr04:032970255 0 W/32970255-32970255 FN3835-S SNP T -> A AC=2;AN=190;BQB=0.819518;DP=2670;DP4=1317,1243,10,16;HOB=0.020831;ICB=0.494793;MQ=14;MQ0F=0.182022;MQB=0.780623;MQSB=0.0440273;RPB=0.95753;SGB=112.85;VDB=0.257812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T94S|595|LOC_Os04g55430|protein_coding|CODING|LOC_Os04g55430.1|1|1) FN3472-S.SNP.4:32971452 chr04:032971452 0 W/32971452-32971452 FN3472-S SNP C -> T AC=1;AN=184;BQB=0.930728;DP=3095;DP4=1625,1364,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.44564e-10;MQSB=0.259405;RPB=0.997954;SGB=46.3132;VDB=0.861521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.4:32973431 chr04:032973431 0 W/32973431-32973431 FN3110-S SNP G -> A AC=1;AN=184;BQB=0.661641;DP=3068;DP4=1546,1401,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.09177e-09;MQSB=0.983861;RPB=0.584085;SGB=30.8405;VDB=0.153001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.4:32979328 chr04:032979328 0 W/32979328-32979328 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.462647;DP=5192;DP4=2581,2372,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.48957e-13;MQSB=0.95866;RPB=0.502358;SGB=86.5007;VDB=0.0473853;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.4:32985697 chr04:032985697 0 W/32985697-32985697 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.8481;DP=4069;DP4=1987,1950,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=12;MQ0F=0.504792;MQB=0.0467707;MQSB=0;RPB=0.77048;SGB=38.983;VDB=0.962458;EFF=INTRON(MODIFIER||||1597|LOC_Os04g55450|protein_coding|CODING|LOC_Os04g55450.1|8|1) FN743-S.SNP.4:32986057 chr04:032986057 0 W/32986057-32986057 FN743-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g55450 transposon protein, putative, unclassified, expressed SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN743-S.SNP.4:32986058 chr04:032986058 0 W/32986058-32986058 FN743-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g55450 transposon protein, putative, unclassified, expressed SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2357.SNP.4:32994259 chr04:032994259 0 W/32994259-32994259 FN2357 SNP T -> C AC=1;AN=192;BQB=0.601246;DP=5046;DP4=2386,2302,15,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.44483e-19;MQSB=0.821964;RPB=0.992885;SGB=-81.7287;VDB=0.711025;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.4:32998802 chr04:032998802 0 W/32998802-32998802 FN2544-S SNP A -> C AC=2;AN=198;BQB=0.91716;DP=4274;DP4=2235,1809,23,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.71908e-19;MQSB=0.988933;RPB=0.998811;SGB=68.2711;VDB=0.295781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Ggt|C229G|557|LOC_Os04g55480|protein_coding|CODING|LOC_Os04g55480.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Ggt|C229G|544|LOC_Os04g55480|protein_coding|CODING|LOC_Os04g55480.2|4|1) FN2190-S.SNP.4:33019240 chr04:033019240 0 W/33019240-33019240 FN2190-S SNP C -> T AC=1;AN=190;BQB=0.99701;DP=5309;DP4=2557,2289,13,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.75614e-22;MQSB=0.71111;RPB=0.798675;SGB=82.3989;VDB=0.547828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.4:33024753 chr04:033024753 0 W/33024753-33024753 FN2560-S SNP A -> T AC=1;AN=198;BQB=0.760949;DP=4413;DP4=2030,2150,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.63555e-06;MQSB=0.872337;RPB=0.922833;SGB=22.1736;VDB=0.166412;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E115V|667|LOC_Os04g55510|protein_coding|CODING|LOC_Os04g55510.1|2|1) FN1321-S.SNP.4:33029341 chr04:033029341 0 W/33029341-33029341 FN1321-S Single Base Substitution G-T INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN442-S.SNP.4:33029853 chr04:033029853 0 W/33029853-33029853 FN442-S Single Base Substitution T-C INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN4145-S.SNP.4:33031319 chr04:033031319 0 W/33031319-33031319 FN4145-S SNP G -> A AC=1;AN=170;BQB=0.999977;DP=2539;DP4=1161,1268,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.41551e-07;MQSB=0.831868;RPB=0.829913;SGB=19.8839;VDB=0.326291;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G131|233|LOC_Os04g55520|protein_coding|CODING|LOC_Os04g55520.1|1|1) FN3657-S.SNP.4:33037971 chr04:033037971 0 W/33037971-33037971 FN3657-S SNP C -> A AC=2;AN=190;BQB=0.232803;DP=2689;DP4=1384,1225,7,15;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0126441;MQB=5.95154e-05;MQSB=5.07986e-06;RPB=0.134899;SGB=68.0854;VDB=0.375313;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S1134Y|1884|LOC_Os04g55530|protein_coding|CODING|LOC_Os04g55530.1|4|1) FN3921-S.SNP.4:33037971 chr04:033037971 0 W/33037971-33037971 FN3921-S SNP C -> A AC=1;AN=158;BQB=0.752554;DP=2674;DP4=1349,1236,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00673149;MQB=2.57545e-06;MQSB=1.44042e-05;RPB=0.799204;SGB=28.5576;VDB=0.889539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S1134Y|1884|LOC_Os04g55530|protein_coding|CODING|LOC_Os04g55530.1|4|1) FN706-S.SNP.4:33037971 chr04:033037971 0 W/33037971-33037971 FN706-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g55530 retrotransposon protein, putative, unclassified, expressed SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2684-S.SNP.4:33038700 chr04:033038700 0 W/33038700-33038700 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.901241;DP=4710;DP4=2203,2252,7,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0059448;MQB=1.20975e-06;MQSB=0.280551;RPB=0.872783;SGB=63.4749;VDB=0.857158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1377L|1884|LOC_Os04g55530|protein_coding|CODING|LOC_Os04g55530.1|4|1) FN2477.SNP.4:33047136 chr04:033047136 0 W/33047136-33047136 FN2477 SNP G -> T AC=2;AN=200;BQB=0.888438;DP=4187;DP4=1853,1973,16,16;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000238834;MQB=2.58332e-15;MQSB=0.894919;RPB=0.771031;SGB=141.763;VDB=0.425767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.4:33051752 chr04:033051752 0 W/33051752-33051752 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.848063;DP=5046;DP4=2504,2262,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94605e-12;MQSB=0.922413;RPB=0.900187;SGB=14.3054;VDB=0.0193806;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.4:33054571 chr04:033054571 0 W/33054571-33054571 FN4344-S SNP G -> T AC=1;AN=170;BQB=0.555653;DP=2533;DP4=1173,1288,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.38527e-06;MQSB=0.96088;RPB=0.406171;SGB=61.2001;VDB=0.641714;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.4:33060287 chr04:033060287 0 W/33060287-33060287 FN994-S Single Base Substitution C-T INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN795-S.SNP.4:33061611 chr04:033061611 0 W/33061611-33061611 FN795-S Single Base Substitution A-G INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1209-S.SNP.4:33064021 chr04:033064021 0 W/33064021-33064021 FN1209-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1509-S.SNP.4:33067472 chr04:033067472 0 W/33067472-33067472 FN1509-S Single Base Substitution T-C INTERGENIC Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1080-S.SNP.4:33069023 chr04:033069023 0 W/33069023-33069023 FN1080-S Single Base Substitution G-T INTERGENIC HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1116-S.SNP.4:33076538 chr04:033076538 0 W/33076538-33076538 FN1116-S Single Base Substitution G-A INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN959-S.SNP.4:33076747 chr04:033076747 0 W/33076747-33076747 FN959-S Single Base Substitution T-C INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2751-S.SNP.4:33079578 chr04:033079578 0 W/33079578-33079578 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.99879;DP=4990;DP4=2237,2480,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23084e-11;MQSB=0.896903;RPB=0.875856;SGB=69.1109;VDB=0.465576;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.4:33080985 chr04:033080985 0 W/33080985-33080985 FN-61 Single Base Substitution C-T INTRON HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN845-S.SNP.4:33086872 chr04:033086872 0 W/33086872-33086872 FN845-S Single Base Substitution T-G INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN_807-3-1.SNP.4:33089651 chr04:033089651 0 W/33089651-33089651 FN_807-3-1 Single Base Substitution A-C Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN-170.SNP.4:33090473 chr04:033090473 0 W/33090473-33090473 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN2147-S.SNP.4:33098635 chr04:033098635 0 W/33098635-33098635 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.0246279;DP=3188;DP4=1510,1627,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62522e-07;MQSB=0.930369;RPB=0.996662;SGB=-150.343;VDB=0.47552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.4:33098636 chr04:033098636 0 W/33098636-33098636 FN2147-S SNP G -> T AC=1;AN=168;BQB=0.0240308;DP=3179;DP4=1505,1621,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.74316e-08;MQSB=0.959357;RPB=0.942214;SGB=-38.3665;VDB=0.564751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.4:33100044 chr04:033100044 0 W/33100044-33100044 FN2433 SNP C -> A AC=2;AN=200;BQB=0.642762;DP=4783;DP4=2347,2152,29,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.84088e-32;MQSB=0.946382;RPB=0.959876;SGB=177.266;VDB=0.293082;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.4:33102799 chr04:033102799 0 W/33102799-33102799 FN727-S Single Base Substitution C-T INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN1762-S.SNP.4:33117902 chr04:033117902 0 W/33117902-33117902 FN1762-S SNP G -> A AC=2;AN=188;BQB=0.0600276;DP=3994;DP4=1707,2221,15,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.84641e-14;MQSB=0.998914;RPB=0.71044;SGB=-173.199;VDB=0.61938;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.4:33121279 chr04:033121279 0 W/33121279-33121279 FN729-S Single Base Substitution C-A INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2696-S.SNP.4:33123656 chr04:033123656 0 W/33123656-33123656 FN2696-S SNP T -> C AC=2;AN=200;BQB=0.99875;DP=4982;DP4=2390,2355,22,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.80318e-28;MQSB=0.996781;RPB=0.349936;SGB=210.84;VDB=0.500559;EFF=UTR_3_PRIME(MODIFIER||3||262|LOC_Os04g55650|protein_coding|CODING|LOC_Os04g55650.1|5|1),UTR_3_PRIME(MODIFIER||174||237|LOC_Os04g55650|protein_coding|CODING|LOC_Os04g55650.2|4|1) FN3384-S.SNP.4:33128932 chr04:033128932 0 W/33128932-33128932 FN3384-S SNP C -> T AC=1;AN=184;BQB=0.99453;DP=3396;DP4=1247,2035,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.12324e-13;MQSB=0.999061;RPB=0.865921;SGB=74.4875;VDB=0.093744;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.4:33135703 chr04:033135703 0 W/33135703-33135703 FN4043-S SNP G -> A AC=2;AN=168;BQB=0.611164;DP=2464;DP4=1290,1051,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.31358e-12;MQSB=0.999992;RPB=0.531143;SGB=123.066;VDB=0.900371;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.4:33140746 chr04:033140746 0 W/33140746-33140746 FN-241 Single Base Substitution G-T INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3889-S.SNP.4:33146881 chr04:033146881 0 W/33146881-33146881 FN3889-S SNP A -> T AC=1;AN=158;BQB=0.959769;DP=3058;DP4=1485,1462,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36722e-08;MQSB=0.242548;RPB=0.397287;SGB=44.1818;VDB=0.681219;EFF=UTR_5_PRIME(MODIFIER||100||469|LOC_Os04g55680|protein_coding|CODING|LOC_Os04g55680.1|1|1) FN1455-S.SNP.4:33160682 chr04:033160682 0 W/33160682-33160682 FN1455-S Single Base Substitution A-G INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3287-S.SNP.4:33169382 chr04:033169382 0 W/33169382-33169382 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.998485;DP=3091;DP4=1598,1390,15,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02003e-14;MQSB=0.831836;RPB=0.971802;SGB=107.526;VDB=0.812776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V518M|613|LOC_Os04g55720|protein_coding|CODING|LOC_Os04g55720.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V358M|453|LOC_Os04g55720|protein_coding|CODING|LOC_Os04g55720.2|4|1) FN2284.SNP.4:33170973 chr04:033170973 0 W/33170973-33170973 FN2284 SNP A -> G AC=1;AN=192;BQB=0.984297;DP=5236;DP4=2596,2362,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.10293e-16;MQSB=0.540973;RPB=0.815089;SGB=113.111;VDB=0.713262;EFF=INTRON(MODIFIER||||796|LOC_Os04g55730|protein_coding|CODING|LOC_Os04g55730.1|16|1) FN3959-S.SNP.4:33172024 chr04:033172024 0 W/33172024-33172024 FN3959-S SNP C -> T AC=2;AN=168;BQB=0.485568;DP=2756;DP4=1298,1338,9,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.38832e-07;MQSB=0.97589;RPB=0.535069;SGB=45.0404;VDB=0.654918;EFF=INTRON(MODIFIER||||796|LOC_Os04g55730|protein_coding|CODING|LOC_Os04g55730.1|14|1) FN1020-S.SNP.4:33181647 chr04:033181647 0 W/33181647-33181647 FN1020-S Single Base Substitution A-G INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1029-S.SNP.4:33184238 chr04:033184238 0 W/33184238-33184238 FN1029-S Single Base Substitution A-G INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1698-S.SNP.4:33190145 chr04:033190145 0 W/33190145-33190145 FN1698-S SNP A -> G AC=1;AN=188;BQB=0.987098;DP=3750;DP4=1762,1957,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000323739;MQSB=0.797113;RPB=0.930134;SGB=35.9843;VDB=0.396446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.4:33190407 chr04:033190407 0 W/33190407-33190407 FN-235 Single Base Substitution G-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2271-S.SNP.4:33191110 chr04:033191110 0 W/33191110-33191110 FN2271-S SNP A -> G AC=1;AN=190;BQB=0.923914;DP=5307;DP4=2323,2343,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55697e-12;MQSB=0.207312;RPB=0.50765;SGB=25.8654;VDB=0.132553;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.4:33192593 chr04:033192593 0 W/33192593-33192593 FN1099-S Single Base Substitution C-T INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN_846-8-1.SNP.4:33193830 chr04:033193830 0 W/33193830-33193830 FN_846-8-1 Single Base Substitution C-T HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2721-S.SNP.4:33198857 chr04:033198857 0 W/33198857-33198857 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.866834;DP=4783;DP4=2232,2320,9,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000627221;MQB=3.2152e-10;MQSB=0.274652;RPB=0.83856;SGB=72.7161;VDB=0.0388465;EFF=INTRON(MODIFIER||||665|LOC_Os04g55770|protein_coding|CODING|LOC_Os04g55770.1|5|1) FN-243.SNP.4:33205949 chr04:033205949 0 W/33205949-33205949 FN-243 Single Base Substitution G-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-233.SNP.4:33207888 chr04:033207888 0 W/33207888-33207888 FN-233 Single Base Substitution G-A INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN4305-S.SNP.4:33211398 chr04:033211398 0 W/33211398-33211398 FN4305-S SNP G -> A AC=1;AN=170;BQB=0.991158;DP=2421;DP4=1495,860,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.61456e-10;MQSB=0.992317;RPB=0.865804;SGB=70.0854;VDB=0.258803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T405I|413|LOC_Os04g55790|protein_coding|CODING|LOC_Os04g55790.1|4|1) FN2420.SNP.4:33216595 chr04:033216595 0 W/33216595-33216595 FN2420 SNP A -> G AC=1;AN=200;BQB=0.349685;DP=4939;DP4=2121,2208,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.05273e-12;MQSB=0.170392;RPB=0.166013;SGB=-137.459;VDB=0.0776043;EFF=INTRON(MODIFIER||||661|LOC_Os04g55800|protein_coding|CODING|LOC_Os04g55800.1|8|1) FN2673-S.SNP.4:33216957 chr04:033216957 0 W/33216957-33216957 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.949747;DP=4795;DP4=2457,2050,12,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57357e-08;MQSB=0.890356;RPB=0.973295;SGB=63.4749;VDB=0.796389;EFF=INTRON(MODIFIER||||661|LOC_Os04g55800|protein_coding|CODING|LOC_Os04g55800.1|7|1) FN1379-S.SNP.4:33221060 chr04:033221060 0 W/33221060-33221060 FN1379-S Single Base Substitution T-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2534-S.SNP.4:33221925 chr04:033221925 0 W/33221925-33221925 FN2534-S SNP G -> C AC=2;AN=198;BQB=0.875341;DP=4348;DP4=1823,2151,14,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.75394e-19;MQSB=0.970573;RPB=0.999854;SGB=-3.71874;VDB=0.961034;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.4:33224183 chr04:033224183 0 W/33224183-33224183 FN1711-S SNP A -> G AC=1;AN=188;BQB=0.000377014;DP=3842;DP4=1836,1963,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.27911e-06;MQSB=0.812805;RPB=0.997494;SGB=-64.8159;VDB=0.861286;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.4:33225274 chr04:033225274 0 W/33225274-33225274 FN629-S Single Base Substitution C-T INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3798-S.SNP.4:33227991 chr04:033227991 0 W/33227991-33227991 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.691138;DP=2264;DP4=1056,1134,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.46613e-06;MQSB=0.977148;RPB=0.786944;SGB=15.9981;VDB=0.567407;EFF=INTRON(MODIFIER||||536|LOC_Os04g55810|protein_coding|CODING|LOC_Os04g55810.1|4|1) FN3502-S.SNP.4:33232817 chr04:033232817 0 W/33232817-33232817 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.999986;DP=4161;DP4=1947,2144,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.0963711;MQB=0.930554;MQSB=0;RPB=0.169412;SGB=67.1521;VDB=0.299629;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S126|1753|LOC_Os04g55820|protein_coding|CODING|LOC_Os04g55820.1|1|1) FN3777-S.SNP.4:33246146 chr04:033246146 0 W/33246146-33246146 FN3777-S SNP T -> C AC=1;AN=190;BQB=0.989773;DP=2506;DP4=1257,1166,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.30085e-05;MQSB=0.000936035;RPB=0.866204;SGB=21.8853;VDB=0.607679;EFF=INTRON(MODIFIER||||548|LOC_Os04g55840|protein_coding|CODING|LOC_Os04g55840.1|1|1) FN428-S.SNP.4:33250445 chr04:033250445 0 W/33250445-33250445 FN428-S Single Base Substitution A-G INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2579-S.SNP.4:33252417 chr04:033252417 0 W/33252417-33252417 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.183489;DP=4624;DP4=2229,2181,7,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51812e-11;MQSB=0.937021;RPB=0.848465;SGB=-38.26;VDB=0.159836;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.4:33260253 chr04:033260253 0 W/33260253-33260253 FN4110-S SNP T -> A AC=1;AN=182;BQB=0.987223;DP=2634;DP4=1285,1256,13,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.00443e-15;MQSB=0.999497;RPB=0.781295;SGB=55.7853;VDB=0.0220253;EFF=INTRON(MODIFIER||||244|LOC_Os04g55860|protein_coding|CODING|LOC_Os04g55860.1|2|1) FN2401.SNP.4:33274544 chr04:033274544 0 W/33274544-33274544 FN2401 SNP G -> A AC=2;AN=200;BQB=0.0288492;DP=4487;DP4=2021,2003,20,24;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0546022;MQB=0.261878;MQSB=0;RPB=0.0450667;SGB=99.8245;VDB=0.855434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1079L|1909|LOC_Os04g55879|protein_coding|CODING|LOC_Os04g55879.1|4|1) FN3574-S.SNP.4:33289733 chr04:033289733 0 W/33289733-33289733 FN3574-S SNP C -> T AC=2;AN=188;BQB=0.649043;DP=3618;DP4=1578,1937,20,27;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0326147;MQB=4.99503e-13;MQSB=0.261515;RPB=0.701337;SGB=156.456;VDB=0.415227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E3K|204|LOC_Os04g55910|protein_coding|CODING|LOC_Os04g55910.1|1|1) FN1184-S.SNP.4:33293653 chr04:033293653 0 W/33293653-33293653 FN1184-S Single Base Substitution C-T INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3749-S.SNP.4:33297600 chr04:033297600 0 W/33297600-33297600 FN3749-S SNP G -> A AC=1;AN=190;BQB=0.96639;DP=2450;DP4=573,1622,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000408163;MQB=0.00072128;MQSB=1.2104e-22;RPB=0.798251;SGB=76.4186;VDB=0.33053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.4:33298188 chr04:033298188 0 W/33298188-33298188 FN1288-S Single Base Substitution A-T INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1688-S.SNP.4:33299498 chr04:033299498 0 W/33299498-33299498 FN1688-S SNP T -> C AC=1;AN=188;BQB=0.507993;DP=4232;DP4=1591,2594,9,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.00791e-12;MQSB=0.86473;RPB=0.782653;SGB=-108.551;VDB=0.294421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.4:33299645 chr04:033299645 0 W/33299645-33299645 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1508-S.SNP.4:33300835 chr04:033300835 0 W/33300835-33300835 FN1508-S Single Base Substitution C-T INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3374-S.SNP.4:33301708 chr04:033301708 0 W/33301708-33301708 FN3374-S SNP T -> C AC=2;AN=184;BQB=0.961935;DP=2052;DP4=752,1204,10,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76126e-16;MQSB=0.00238003;RPB=0.815751;SGB=96.9718;VDB=0.0687323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.4:33302013 chr04:033302013 0 W/33302013-33302013 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.581944;DP=2266;DP4=1213,903,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000882613;MQB=2.32734e-05;MQSB=0.340198;RPB=0.218778;SGB=43.2083;VDB=0.433609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.4:33316637 chr04:033316637 0 W/33316637-33316637 FN1762-S SNP G -> A AC=2;AN=188;BQB=0.922933;DP=4083;DP4=1983,2053,18,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.53584e-15;MQSB=0.990538;RPB=0.993637;SGB=-44.6718;VDB=0.128633;EFF=INTRON(MODIFIER||||417|LOC_Os04g55940|protein_coding|CODING|LOC_Os04g55940.1|6|1),INTRON(MODIFIER||||417|LOC_Os04g55940|protein_coding|CODING|LOC_Os04g55940.2|5|1) FN2378.SNP.4:33318010 chr04:033318010 0 W/33318010-33318010 FN2378 SNP A -> T AC=1;AN=192;BQB=0.433909;DP=5096;DP4=2366,2407,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.32081e-14;MQSB=0.983667;RPB=0.944319;SGB=29.2557;VDB=0.635264;EFF=INTRON(MODIFIER||||417|LOC_Os04g55940|protein_coding|CODING|LOC_Os04g55940.1|10|1),INTRON(MODIFIER||||417|LOC_Os04g55940|protein_coding|CODING|LOC_Os04g55940.2|9|1) FN2185-S.SNP.4:33320081 chr04:033320081 0 W/33320081-33320081 FN2185-S SNP A -> G AC=1;AN=190;BQB=0.912384;DP=4396;DP4=2066,2073,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=7.27624e-08;MQSB=0.101115;RPB=0.72593;SGB=64.5316;VDB=0.273301;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.4:33326806 chr04:033326806 0 W/33326806-33326806 FN1748-S SNP G -> A AC=2;AN=188;BQB=0.77135;DP=3162;DP4=1472,1636,22,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.26612e-20;MQSB=0.997574;RPB=0.509813;SGB=-1.41739;VDB=0.681841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.4:33347525 chr04:033347525 0 W/33347525-33347525 FN2329 SNP C -> G AC=1;AN=192;BQB=0.907002;DP=5174;DP4=2769,1980,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000193274;MQB=3.93435e-09;MQSB=0.85299;RPB=0.997431;SGB=31.4783;VDB=0.399701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.4:33348556 chr04:033348556 0 W/33348556-33348556 FN2385 SNP G -> A AC=1;AN=192;BQB=0.881328;DP=4891;DP4=2309,2292,15,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.51623e-15;MQSB=0.990783;RPB=0.620974;SGB=29.2557;VDB=0.58058;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.4:33348689 chr04:033348689 0 W/33348689-33348689 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN957-S.SNP.4:33349278 chr04:033349278 0 W/33349278-33349278 FN957-S Single Base Substitution C-T INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2298.SNP.4:33349407 chr04:033349407 0 W/33349407-33349407 FN2298 SNP G -> T AC=1;AN=192;BQB=0.980888;DP=4446;DP4=2092,1767,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58909e-11;MQSB=0.011003;RPB=0.971296;SGB=62.2505;VDB=0.61193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.4:33351127 chr04:033351127 0 W/33351127-33351127 FN3404-S SNP C -> T AC=2;AN=184;BQB=0.975591;DP=2480;DP4=1273,1137,4,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.22282e-09;MQSB=0.906655;RPB=0.972645;SGB=57.786;VDB=0.96304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.4:33351644 chr04:033351644 0 W/33351644-33351644 FN3700-S SNP C -> A AC=1;AN=190;BQB=0.87986;DP=2450;DP4=1147,1185,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.40522e-08;MQSB=0.999995;RPB=0.793007;SGB=39.6545;VDB=0.773413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.4:33351645 chr04:033351645 0 W/33351645-33351645 FN3700-S SNP T -> A AC=1;AN=190;BQB=0.492524;DP=2459;DP4=1181,1185,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22105e-08;MQSB=0.999359;RPB=0.967188;SGB=53.6492;VDB=0.694814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.4:33352948 chr04:033352948 0 W/33352948-33352948 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.856057;DP=4374;DP4=1721,2209,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000575119;MQSB=0.000374509;RPB=0.410759;SGB=45.0543;VDB=0.513951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.4:33358305 chr04:033358305 0 W/33358305-33358305 FN2124-S SNP T -> C AC=1;AN=168;BQB=0.933976;DP=3184;DP4=1680,1470,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35915e-06;MQSB=0.671139;RPB=0.755899;SGB=-16.2342;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.4:33358834 chr04:033358834 0 W/33358834-33358834 FN319-S Single Base Substitution G-A INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN1515-S.SNP.4:33359893 chr04:033359893 0 W/33359893-33359893 FN1515-S Single Base Substitution C-G INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2531-S.SNP.4:33361832 chr04:033361832 0 W/33361832-33361832 FN2531-S SNP C -> A AC=1;AN=198;BQB=0.496322;DP=4251;DP4=2036,1966,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.52978e-10;MQSB=0.0098164;RPB=0.203416;SGB=-12.6455;VDB=0.352025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.4:33362105 chr04:033362105 0 W/33362105-33362105 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.843835;DP=2879;DP4=1269,1531,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00659951;MQB=0.0269746;MQSB=0.595678;RPB=0.959478;SGB=62.7569;VDB=0.548476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.4:33370660 chr04:033370660 0 W/33370660-33370660 FN3391-S SNP C -> T AC=1;AN=184;BQB=0.986207;DP=3163;DP4=1890,1149,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.38198e-09;MQSB=0.983794;RPB=0.94685;SGB=66.8296;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.4:33374061 chr04:033374061 0 W/33374061-33374061 FN395-S Single Base Substitution T-A INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3834-S.SNP.4:33376458 chr04:033376458 0 W/33376458-33376458 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.911086;DP=2515;DP4=1515,915,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.00782e-07;MQSB=0.915395;RPB=0.706035;SGB=44.5415;VDB=0.737713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.4:33382159 chr04:033382159 0 W/33382159-33382159 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.977954;DP=2484;DP4=1224,1156,11,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.59717e-11;MQSB=0.895626;RPB=0.12773;SGB=30.927;VDB=0.349049;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.4:33382681 chr04:033382681 0 W/33382681-33382681 FN931-S Single Base Substitution T-C INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN402-S.SNP.4:33383601 chr04:033383601 0 W/33383601-33383601 FN402-S Single Base Substitution G-A INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN4312-S.SNP.4:33384195 chr04:033384195 0 W/33384195-33384195 FN4312-S SNP A -> T AC=1;AN=170;BQB=0.811172;DP=2356;DP4=1306,854,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.21608e-05;MQSB=0.407786;RPB=0.995752;SGB=21.1076;VDB=0.18406;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.4:33387303 chr04:033387303 0 W/33387303-33387303 FN-160 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g56060 protein kinase domain containing protein, expressed SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. W313-1-1-1-1.SNP.4:33394567 chr04:033394567 0 W/33394567-33394567 W313-1-1-1-1 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN1388-S.SNP.4:33404066 chr04:033404066 0 W/33404066-33404066 FN1388-S Single Base Substitution C-T INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1152-S.SNP.4:33414195 chr04:033414195 0 W/33414195-33414195 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN581-S.SNP.4:33419270 chr04:033419270 0 W/33419270-33419270 FN581-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN581-S.SNP.4:33419271 chr04:033419271 0 W/33419271-33419271 FN581-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3976-S.SNP.4:33422494 chr04:033422494 0 W/33422494-33422494 FN3976-S SNP C -> A AC=1;AN=168;BQB=0.850728;DP=2637;DP4=1354,1198,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.64387e-09;MQSB=0.985832;RPB=0.884929;SGB=52.1728;VDB=0.515483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A241S|431|LOC_Os04g56120|protein_coding|CODING|LOC_Os04g56120.1|2|1) FN3976-S.SNP.4:33422495 chr04:033422495 0 W/33422495-33422495 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.832627;DP=2632;DP4=1360,1201,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.86264e-08;MQSB=0.98156;RPB=0.941498;SGB=47.7421;VDB=0.462963;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G240|431|LOC_Os04g56120|protein_coding|CODING|LOC_Os04g56120.1|2|1) FN3976-S.SNP.4:33422496 chr04:033422496 0 W/33422496-33422496 FN3976-S SNP C -> A AC=1;AN=168;BQB=0.995108;DP=2631;DP4=1348,1192,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00812e-09;MQSB=0.964362;RPB=0.649354;SGB=38.1788;VDB=0.481346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G240V|431|LOC_Os04g56120|protein_coding|CODING|LOC_Os04g56120.1|2|1) FN849-S.SNP.4:33424153 chr04:033424153 0 W/33424153-33424153 FN849-S Single Base Substitution A-C INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1685-S.SNP.4:33432018 chr04:033432018 0 W/33432018-33432018 FN1685-S SNP G -> C AC=1;AN=188;BQB=0.911209;DP=3598;DP4=1647,1911,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.85713e-14;MQSB=0.999684;RPB=0.906726;SGB=17.8846;VDB=0.635333;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K296N|577|LOC_Os04g56140|protein_coding|CODING|LOC_Os04g56140.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K293N|574|LOC_Os04g56140|protein_coding|CODING|LOC_Os04g56140.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K296N|550|LOC_Os04g56140|protein_coding|CODING|LOC_Os04g56140.3|4|1) FN1190-S.SNP.4:33445058 chr04:033445058 0 W/33445058-33445058 FN1190-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3890-S.SNP.4:33449361 chr04:033449361 0 W/33449361-33449361 FN3890-S SNP C -> A AC=1;AN=158;BQB=0.966751;DP=2499;DP4=1233,1161,16,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.39269e-14;MQSB=0.899078;RPB=0.79685;SGB=90.7616;VDB=0.00907131;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.4:33451752 chr04:033451752 0 W/33451752-33451752 FN1375-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1375-S.SNP.4:33451753 chr04:033451753 0 W/33451753-33451753 FN1375-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2374.SNP.4:33457073 chr04:033457073 0 W/33457073-33457073 FN2374 SNP G -> T AC=1;AN=192;BQB=0.949823;DP=4644;DP4=2030,2390,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.45671e-06;MQSB=0.95332;RPB=0.87761;SGB=36.2157;VDB=0.323571;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.4:33457388 chr04:033457388 0 W/33457388-33457388 W138-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1514-S.SNP.4:33457528 chr04:033457528 0 W/33457528-33457528 FN1514-S Single Base Substitution C-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1509-S.SNP.4:33474184 chr04:033474184 0 W/33474184-33474184 FN1509-S Single Base Substitution T-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN4100-S.SNP.4:33488249 chr04:033488249 0 W/33488249-33488249 FN4100-S SNP T -> C AC=1;AN=182;BQB=0.861178;DP=2631;DP4=1427,1134,10,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.19677e-11;MQSB=0.996566;RPB=0.937063;SGB=84.7091;VDB=0.574043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.4:33496923 chr04:033496923 0 W/33496923-33496923 FN1394-S Single Base Substitution G-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1301-S.SNP.4:33503131 chr04:033503131 0 W/33503131-33503131 FN1301-S Single Base Substitution G-A INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2232-S.SNP.4:33504693 chr04:033504693 0 W/33504693-33504693 FN2232-S SNP G -> T AC=1;AN=190;BQB=0.111506;DP=4053;DP4=2035,1434,15,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.83103e-10;MQSB=0.235992;RPB=0.305042;SGB=14.9883;VDB=0.807885;EFF=INTRON(MODIFIER||||337|LOC_Os04g56180|protein_coding|CODING|LOC_Os04g56180.1|2|1) FN3917-S.SNP.4:33506322 chr04:033506322 0 W/33506322-33506322 FN3917-S SNP T -> C AC=1;AN=158;BQB=0.889906;DP=2514;DP4=1126,1250,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.19933e-06;MQSB=0.815585;RPB=0.168708;SGB=-3.39162;VDB=0.242386;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.4:33507662 chr04:033507662 0 W/33507662-33507662 FN4304-S SNP G -> T AC=2;AN=170;BQB=0.831583;DP=2562;DP4=1225,1241,5,18;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.14828e-10;MQSB=0.68044;RPB=0.141896;SGB=69.3045;VDB=0.671082;EFF=INTERGENIC(MODIFIER||||||||||1) FN-14.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN-14 Single Base Substitution G-A INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-401.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN-401 Single Base Substitution G-A INTERGENIC HOMO SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN-75.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN-75 Single Base Substitution G-A INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1022-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1022-S Single Base Substitution G-A INTERGENIC HOMO SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1086-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1086-S Single Base Substitution G-A INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1182-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1182-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1271-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1271-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN1381-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1381-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1467-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN1467-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3985-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN3985-S SNP G -> A AC=2;AN=168;BQB=0.638481;DP=2129;DP4=1016,944,14,20;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.77981e-10;MQSB=1.43425e-05;RPB=0.450825;SGB=29.9454;VDB=0.135187;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.930109;DP=2091;DP4=932,1019,10,11;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0;MQB=8.95286e-07;MQSB=5.50812e-11;RPB=0.131455;SGB=62.4192;VDB=0.391661;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN426-S Single Base Substitution G-A INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN568-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN568-S Single Base Substitution G-A INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN812-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN812-S Single Base Substitution G-A INTERGENIC HOMO SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN869-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN869-S Single Base Substitution G-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN915-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN915-S Single Base Substitution G-A INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN979-S.SNP.4:33511067 chr04:033511067 0 W/33511067-33511067 FN979-S Single Base Substitution G-A INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN469-S.SNP.4:33511122 chr04:033511122 0 W/33511122-33511122 FN469-S Single Base Substitution T-A INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. W42-1-3S-1.SNP.4:33525216 chr04:033525216 0 W/33525216-33525216 W42-1-3S-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g56230 polyprenyl synthetase, putative, expressed SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-233.SNP.4:33542829 chr04:033542829 0 W/33542829-33542829 FN-233 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1481-S.SNP.4:33549670 chr04:033549670 0 W/33549670-33549670 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3799-S.SNP.4:33550402 chr04:033550402 0 W/33550402-33550402 FN3799-S SNP T -> C AC=1;AN=190;BQB=0.970792;DP=2977;DP4=1361,1491,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0315754;MQB=0.143718;MQSB=0.000227479;RPB=0.51129;SGB=82.301;VDB=0.915172;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.4:33556973 chr04:033556973 0 W/33556973-33556973 FN3476-S SNP C -> A AC=2;AN=184;BQB=0.744804;DP=2727;DP4=1290,1242,18,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4746e-22;MQSB=0.947215;RPB=0.161762;SGB=52.3384;VDB=0.597239;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.4:33558370 chr04:033558370 0 W/33558370-33558370 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.914209;DP=2832;DP4=1412,1337,11,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.81095e-14;MQSB=0.563464;RPB=0.720929;SGB=107.263;VDB=0.0160494;EFF=INTRON(MODIFIER||||344|LOC_Os04g56290|protein_coding|CODING|LOC_Os04g56290.1|1|1),INTRON(MODIFIER||||344|LOC_Os04g56290|protein_coding|CODING|LOC_Os04g56290.2|1|1),INTRON(MODIFIER||||344|LOC_Os04g56290|protein_coding|CODING|LOC_Os04g56290.5|1|1),INTRON(MODIFIER||||118|LOC_Os04g56290|protein_coding|CODING|LOC_Os04g56290.6|1|1) FN2411.SNP.4:33574749 chr04:033574749 0 W/33574749-33574749 FN2411 SNP A -> G AC=2;AN=200;BQB=0.95158;DP=4952;DP4=2456,2061,32,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.10641e-28;MQSB=0.928589;RPB=0.917689;SGB=10.4914;VDB=0.220554;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.4:33576028 chr04:033576028 0 W/33576028-33576028 FN4082-S SNP A -> G AC=1;AN=182;BQB=0.989883;DP=3077;DP4=1498,1492,14,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.63361e-18;MQSB=0.999148;RPB=0.861141;SGB=55.7853;VDB=0.38867;EFF=INTRON(MODIFIER||||245|LOC_Os04g56320|protein_coding|CODING|LOC_Os04g56320.1|9|1) FN776-S.SNP.4:33583752 chr04:033583752 0 W/33583752-33583752 FN776-S Single Base Substitution T-C INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN731-S.SNP.4:33598877 chr04:033598877 0 W/33598877-33598877 FN731-S Single Base Substitution G-A INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2388.SNP.4:33607823 chr04:033607823 0 W/33607823-33607823 FN2388 SNP G -> A AC=1;AN=200;BQB=0.939486;DP=4391;DP4=2175,1977,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96956e-16;MQSB=0.944962;RPB=0.954887;SGB=137.158;VDB=0.57678;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN-262 Single Base Substitution G-T INTERGENIC HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-341.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN-341 Single Base Substitution G-T INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-98.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN-98 Single Base Substitution G-T INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1231-S.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN1231-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN1669-S.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN1669-S SNP G -> T AC=1;AN=188;BQB=0.28335;DP=3768;DP4=1835,1856,20,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.45959e-11;MQSB=0.98866;RPB=0.993017;SGB=-274.986;VDB=0.939047;EFF=INTERGENIC(MODIFIER||||||||||1) FN3095-S.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN3095-S SNP G -> T AC=1;AN=184;BQB=0.506416;DP=2949;DP4=1488,1254,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.57007e-10;MQSB=0.984785;RPB=0.861276;SGB=56.8786;VDB=0.930146;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.4:33608480 chr04:033608480 0 W/33608480-33608480 FN809-S Single Base Substitution G-T INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2666-S.SNP.4:33613056 chr04:033613056 0 W/33613056-33613056 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.967925;DP=4902;DP4=2262,2376,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39501e-12;MQSB=0.716674;RPB=0.85151;SGB=69.1109;VDB=0.806733;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.4:33613350 chr04:033613350 0 W/33613350-33613350 FN1313-S Single Base Substitution C-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN902-S.SNP.4:33635367 chr04:033635367 0 W/33635367-33635367 FN902-S Single Base Substitution G-A INTERGENIC HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2351.SNP.4:33636399 chr04:033636399 0 W/33636399-33636399 FN2351 SNP C -> T AC=1;AN=192;BQB=0.553951;DP=5101;DP4=2201,2525,10,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44318e-15;MQSB=0.205015;RPB=0.400046;SGB=29.2557;VDB=0.524291;EFF=START_GAINED(LOW||||106|LOC_Os04g56420|protein_coding|CODING|LOC_Os04g56420.1|1|1),UTR_5_PRIME(MODIFIER||1455||106|LOC_Os04g56420|protein_coding|CODING|LOC_Os04g56420.1|1|1) FN2104-S.SNP.4:33639616 chr04:033639616 0 W/33639616-33639616 FN2104-S SNP T -> A AC=2;AN=168;BQB=0.105018;DP=4450;DP4=1878,2526,13,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.30999e-14;MQSB=0.992241;RPB=0.694182;SGB=-85.3291;VDB=0.62202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.4:33639617 chr04:033639617 0 W/33639617-33639617 FN3495-S SNP A -> G AC=2;AN=188;BQB=0.80603;DP=2745;DP4=1278,1362,19,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.39227e-16;MQSB=0.933077;RPB=0.00189928;SGB=106.85;VDB=0.392618;EFF=INTERGENIC(MODIFIER||||||||||1) FN876-S.SNP.4:33639649 chr04:033639649 0 W/33639649-33639649 FN876-S Single Base Substitution G-A INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2407.SNP.4:33664788 chr04:033664788 0 W/33664788-33664788 FN2407 SNP T -> C AC=1;AN=200;BQB=0.958422;DP=4735;DP4=2008,2333,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.04108e-14;MQSB=0.953567;RPB=0.763165;SGB=50.3263;VDB=0.601464;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.4:33678136 chr04:033678136 0 W/33678136-33678136 FN-349 Single Base Substitution T-A UTR_3_PRIME HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2771-S.SNP.4:33678390 chr04:033678390 0 W/33678390-33678390 FN2771-S SNP A -> T AC=1;AN=198;BQB=0.834228;DP=3827;DP4=2035,1607,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.98036e-11;MQSB=0.977106;RPB=0.757957;SGB=86.3098;VDB=0.531617;EFF=UTR_3_PRIME(MODIFIER||4354||202|LOC_Os04g56500|protein_coding|CODING|LOC_Os04g56500.1|2|1) FN2359.SNP.4:33682245 chr04:033682245 0 W/33682245-33682245 FN2359 SNP C -> T AC=1;AN=192;BQB=0.973082;DP=5063;DP4=2278,2424,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.71589e-11;MQSB=0.812575;RPB=0.915202;SGB=-39.6843;VDB=0.374967;EFF=INTRON(MODIFIER||||202|LOC_Os04g56500|protein_coding|CODING|LOC_Os04g56500.1|1|1) FN455-S.SNP.4:33685799 chr04:033685799 0 W/33685799-33685799 FN455-S Single Base Substitution C-T INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN778-S.SNP.4:33688783 chr04:033688783 0 W/33688783-33688783 FN778-S Single Base Substitution T-C INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN778-S.SNP.4:33688784 chr04:033688784 0 W/33688784-33688784 FN778-S Single Base Substitution C-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN-132.SNP.4:33699207 chr04:033699207 0 W/33699207-33699207 FN-132 Single Base Substitution A-G INTRON HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1689-S.SNP.4:33702928 chr04:033702928 0 W/33702928-33702928 FN1689-S SNP G -> T AC=1;AN=188;BQB=0.987284;DP=2753;DP4=810,1920,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.55998e-07;MQSB=0.919961;RPB=0.563164;SGB=25.3545;VDB=0.508631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H30N|629|LOC_Os04g56510|protein_coding|CODING|LOC_Os04g56510.1|3|1) FN454-S.SNP.4:33707484 chr04:033707484 0 W/33707484-33707484 FN454-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN1272-S.SNP.4:33710198 chr04:033710198 0 W/33710198-33710198 FN1272-S Single Base Substitution C-T INTRON HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1035-S.SNP.4:33714663 chr04:033714663 0 W/33714663-33714663 FN1035-S Single Base Substitution G-T INTRON HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1154-S.SNP.4:33720518 chr04:033720518 0 W/33720518-33720518 FN1154-S Single Base Substitution A-G INTRON HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN-219.SNP.4:33722950 chr04:033722950 0 W/33722950-33722950 FN-219 Single Base Substitution G-T INTRON HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN2161-S.SNP.4:33727319 chr04:033727319 0 W/33727319-33727319 FN2161-S SNP T -> C AC=1;AN=168;BQB=0.425402;DP=2575;DP4=1415,1110,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000190167;MQSB=0.960351;RPB=0.997471;SGB=-38.3665;VDB=0.997535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.4:33728148 chr04:033728148 0 W/33728148-33728148 FN3740-S SNP C -> T AC=1;AN=190;BQB=0.997801;DP=2680;DP4=1110,1369,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52345e-05;MQSB=0.840013;RPB=0.286616;SGB=25.439;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.4:33734701 chr04:033734701 0 W/33734701-33734701 FN1739-S SNP T -> G AC=1;AN=188;BQB=0.293075;DP=3453;DP4=1910,1509,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.48655e-08;MQSB=0.972043;RPB=0.999514;SGB=-13.3699;VDB=0.189163;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.4:33741820 chr04:033741820 0 W/33741820-33741820 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.744519;DP=2795;DP4=1473,1261,12,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.70744e-08;MQSB=0.947946;RPB=0.622089;SGB=66.6657;VDB=0.742898;EFF=INTRON(MODIFIER||||346|LOC_Os04g56590|protein_coding|CODING|LOC_Os04g56590.1|9|1) FN302-S.SNP.4:33752387 chr04:033752387 0 W/33752387-33752387 FN302-S Single Base Substitution C-T INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN691-S.SNP.4:33792082 chr04:033792082 0 W/33792082-33792082 FN691-S Single Base Substitution T-A INTERGENIC HOMO SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN691-S.SNP.4:33792083 chr04:033792083 0 W/33792083-33792083 FN691-S Single Base Substitution T-A INTERGENIC HOMO SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2229-S.SNP.4:33793890 chr04:033793890 0 W/33793890-33793890 FN2229-S SNP A -> G AC=1;AN=190;BQB=0.913351;DP=4948;DP4=2052,2371,26,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.02669e-19;MQSB=0.830214;RPB=0.417301;SGB=87.5066;VDB=0.811047;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.4:33800261 chr04:033800261 0 W/33800261-33800261 FN4094-S SNP T -> A AC=1;AN=182;BQB=0.858559;DP=2948;DP4=1511,1269,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.6175e-06;MQSB=0.235819;RPB=0.535028;SGB=35.0899;VDB=0.642877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.4:33801321 chr04:033801321 0 W/33801321-33801321 FN1531-S Single Base Substitution T-C INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1048-S.SNP.4:33801963 chr04:033801963 0 W/33801963-33801963 FN1048-S Single Base Substitution T-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN-153.SNP.4:33802958 chr04:033802958 0 W/33802958-33802958 FN-153 Single Base Substitution T-C INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2631-S.SNP.4:33804433 chr04:033804433 0 W/33804433-33804433 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.519922;DP=5349;DP4=2276,2777,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13492e-17;MQSB=0.864691;RPB=0.778173;SGB=55.5366;VDB=0.0355791;EFF=UTR_3_PRIME(MODIFIER||440||153|LOC_Os04g56690|protein_coding|CODING|LOC_Os04g56690.1|1|1) FN2631-S.SNP.4:33804434 chr04:033804434 0 W/33804434-33804434 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.639151;DP=5338;DP4=2340,2710,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.3747e-17;MQSB=0.958448;RPB=0.774781;SGB=83.5316;VDB=0.0378016;EFF=UTR_3_PRIME(MODIFIER||439||153|LOC_Os04g56690|protein_coding|CODING|LOC_Os04g56690.1|1|1) FN3432-S.SNP.4:33813235 chr04:033813235 0 W/33813235-33813235 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.382511;DP=3002;DP4=1468,1347,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96978e-10;MQSB=0.784239;RPB=0.886442;SGB=35.884;VDB=0.506206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.4:33826216 chr04:033826216 0 W/33826216-33826216 FN2088-S SNP G -> C AC=2;AN=168;BQB=0.0215063;DP=4414;DP4=2086,2260,24,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.0682e-22;MQSB=0.990789;RPB=0.0168333;SGB=-1.15556;VDB=0.0219673;EFF=INTRON(MODIFIER||||549|LOC_Os04g56720|protein_coding|CODING|LOC_Os04g56720.1|10|1) FN2311.SNP.4:33829488 chr04:033829488 0 W/33829488-33829488 FN2311 SNP G -> T AC=1;AN=192;BQB=0.514866;DP=5222;DP4=2584,2355,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04838e-12;MQSB=0.966099;RPB=0.99041;SGB=81.1609;VDB=0.657466;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F181L|224|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F181L|224|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.3|10|1),UTR_3_PRIME(MODIFIER||161||146|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.1|10|1) FN2311.SNP.4:33829489 chr04:033829489 0 W/33829489-33829489 FN2311 SNP A -> T AC=1;AN=192;BQB=0.659451;DP=5219;DP4=2575,2379,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.96303e-14;MQSB=0.96916;RPB=0.999999;SGB=39.1713;VDB=0.552261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F181Y|224|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F181Y|224|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.3|10|1),UTR_3_PRIME(MODIFIER||160||146|LOC_Os04g56730|protein_coding|CODING|LOC_Os04g56730.1|10|1) FN2602-S.SNP.4:33843606 chr04:033843606 0 W/33843606-33843606 FN2602-S SNP A -> T AC=1;AN=198;BQB=0.869761;DP=4189;DP4=1970,1992,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.48644e-09;MQSB=0.999321;RPB=0.961433;SGB=58.7391;VDB=0.0948553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T454S|893|LOC_Os04g56740|protein_coding|CODING|LOC_Os04g56740.1|5|1) FN2602-S.SNP.4:33843607 chr04:033843607 0 W/33843607-33843607 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.980027;DP=4193;DP4=1976,1994,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61894e-09;MQSB=0.99591;RPB=0.977502;SGB=58.7391;VDB=0.0948553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T454I|893|LOC_Os04g56740|protein_coding|CODING|LOC_Os04g56740.1|5|1) FN1673-S.SNP.4:33844670 chr04:033844670 0 W/33844670-33844670 FN1673-S SNP C -> A AC=1;AN=188;BQB=0.401361;DP=3621;DP4=1761,1826,15,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31346e-11;MQSB=0.888803;RPB=0.688328;SGB=36.2493;VDB=0.273059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S808R|893|LOC_Os04g56740|protein_coding|CODING|LOC_Os04g56740.1|5|1) FN915-S.SNP.4:33847085 chr04:033847085 0 W/33847085-33847085 FN915-S Single Base Substitution G-C INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN681-S.SNP.4:33864953 chr04:033864953 0 W/33864953-33864953 FN681-S Single Base Substitution G-A INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W706-3-1.SNP.4:33866523 chr04:033866523 0 W/33866523-33866523 W706-3-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. W42-1-3S-1.SNP.4:33876539 chr04:033876539 0 W/33876539-33876539 W42-1-3S-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3944-S.SNP.4:33880222 chr04:033880222 0 W/33880222-33880222 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.342015;DP=2829;DP4=1276,1461,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00882876;MQSB=0.48172;RPB=0.987178;SGB=21.0249;VDB=0.497855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.4:33885847 chr04:033885847 0 W/33885847-33885847 FN-256 Single Base Substitution A-C UTR_3_PRIME HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2780-S.SNP.4:33886357 chr04:033886357 0 W/33886357-33886357 FN2780-S SNP C -> T AC=2;AN=198;BQB=0.252784;DP=3725;DP4=2003,1510,29,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.64817e-26;MQSB=0.99425;RPB=0.663929;SGB=241.556;VDB=0.676384;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R37|104|LOC_Os04g56840|protein_coding|CODING|LOC_Os04g56840.1|1|1) FN591-S.SNP.4:33900321 chr04:033900321 0 W/33900321-33900321 FN591-S Single Base Substitution G-A INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2639-S.SNP.4:33908516 chr04:033908516 0 W/33908516-33908516 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.80643;DP=4851;DP4=2319,2271,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60319e-16;MQSB=0.131313;RPB=0.507402;SGB=118.737;VDB=0.20978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.4:33910701 chr04:033910701 0 W/33910701-33910701 FN1287-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2591-S.SNP.4:33914598 chr04:033914598 0 W/33914598-33914598 FN2591-S SNP C -> T AC=1;AN=198;BQB=0.947469;DP=4184;DP4=2236,1702,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.36588e-05;MQSB=0.752248;RPB=0.906781;SGB=13.7737;VDB=0.912116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.4:33916274 chr04:033916274 0 W/33916274-33916274 FN3656-S SNP C -> T AC=1;AN=190;BQB=0.603724;DP=2762;DP4=1334,1266,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74545e-07;MQSB=0.999647;RPB=0.243712;SGB=1.00337;VDB=0.425465;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.4:33916352 chr04:033916352 0 W/33916352-33916352 W464-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-175.SNP.4:33927516 chr04:033927516 0 W/33927516-33927516 FN-175 Single Base Substitution A-T INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-199.SNP.4:33932241 chr04:033932241 0 W/33932241-33932241 FN-199 Single Base Substitution T-G INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. W278-3-1.SNP.4:33932862 chr04:033932862 0 W/33932862-33932862 W278-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2356.SNP.4:33944056 chr04:033944056 0 W/33944056-33944056 FN2356 SNP C -> T AC=2;AN=192;BQB=0.159218;DP=5333;DP4=2602,2397,35,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000187512;MQB=1.54409e-32;MQSB=0.909949;RPB=0.947608;SGB=74.6218;VDB=0.918857;EFF=UTR_3_PRIME(MODIFIER||102||505|LOC_Os04g56930|protein_coding|CODING|LOC_Os04g56930.1|6|1),UTR_3_PRIME(MODIFIER||102||471|LOC_Os04g56930|protein_coding|CODING|LOC_Os04g56930.2|5|1) FN4190-S.SNP.4:33948788 chr04:033948788 0 W/33948788-33948788 FN4190-S SNP C -> T AC=2;AN=170;BQB=0.695157;DP=2400;DP4=1236,1100,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.22421e-13;MQSB=0.984605;RPB=0.273317;SGB=114.512;VDB=0.278458;EFF=INTRON(MODIFIER||||100|LOC_Os04g56939|protein_coding|CODING|LOC_Os04g56939.1|2|1) FN3362-S.SNP.4:33952607 chr04:033952607 0 W/33952607-33952607 FN3362-S SNP A -> G AC=1;AN=184;BQB=0.995912;DP=3234;DP4=1404,1620,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25568e-11;MQSB=0.915055;RPB=0.974375;SGB=67.4439;VDB=0.306516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3546-S.SNP.4:33966494 chr04:033966494 0 W/33966494-33966494 FN3546-S SNP G -> A AC=2;AN=188;BQB=0.96267;DP=2917;DP4=1454,1380,14,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.58659e-14;MQSB=0.921988;RPB=0.804687;SGB=108.042;VDB=0.246479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A43V|404|LOC_Os04g56970|protein_coding|CODING|LOC_Os04g56970.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A43V|402|LOC_Os04g56970|protein_coding|CODING|LOC_Os04g56970.2|1|1) FN1486-S.SNP.4:33974899 chr04:033974899 0 W/33974899-33974899 FN1486-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os04g56990 Myb-like DNA-binding domain containing protein, putative, expressed SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN2686-S.SNP.4:33976574 chr04:033976574 0 W/33976574-33976574 FN2686-S SNP C -> T AC=1;AN=200;BQB=0.214654;DP=5054;DP4=2331,2413,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27058e-12;MQSB=0.934411;RPB=0.927834;SGB=-8.87404;VDB=0.627212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.4:33987675 chr04:033987675 0 W/33987675-33987675 FN3893-S SNP T -> G AC=1;AN=158;BQB=0.484649;DP=2315;DP4=1145,1094,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.53632e-08;MQSB=0.966713;RPB=0.735721;SGB=50.9207;VDB=0.387311;EFF=INTRON(MODIFIER||||301|LOC_Os04g57020|protein_coding|CODING|LOC_Os04g57020.1|3|1),INTRON(MODIFIER||||301|LOC_Os04g57020|protein_coding|CODING|LOC_Os04g57020.2|3|1),INTRON(MODIFIER||||208|LOC_Os04g57020|protein_coding|CODING|LOC_Os04g57020.3|2|1) FN419-S.SNP.4:33988808 chr04:033988808 0 W/33988808-33988808 FN419-S Single Base Substitution T-A INTRON HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN3110-S.SNP.4:33990829 chr04:033990829 0 W/33990829-33990829 FN3110-S SNP G -> T AC=1;AN=184;BQB=0.456435;DP=3146;DP4=1479,1522,10,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42253e-12;MQSB=0.998582;RPB=0.58142;SGB=78.0093;VDB=0.485596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.4:33991230 chr04:033991230 0 W/33991230-33991230 FN1040-S Single Base Substitution C-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3388-S.SNP.4:33995007 chr04:033995007 0 W/33995007-33995007 FN3388-S SNP C -> A AC=1;AN=184;BQB=0.976981;DP=2940;DP4=1288,1395,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05278e-10;MQSB=0.968493;RPB=0.635396;SGB=71.3514;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.4:33997299 chr04:033997299 0 W/33997299-33997299 FN1686-S SNP G -> T AC=1;AN=188;BQB=0.681107;DP=3747;DP4=1670,2032,18,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10712e-10;MQSB=0.824995;RPB=0.964485;SGB=-40.5615;VDB=0.702903;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.4:34001066 chr04:034001066 0 W/34001066-34001066 FN4112-S SNP A -> T AC=1;AN=182;BQB=0.990005;DP=2821;DP4=1304,1381,10,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000354484;MQB=2.84603e-08;MQSB=0.979869;RPB=0.878577;SGB=48.6223;VDB=0.180121;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.4:34001067 chr04:034001067 0 W/34001067-34001067 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.838316;DP=2822;DP4=1359,1383,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000354359;MQB=7.22117e-09;MQSB=0.998773;RPB=0.321473;SGB=42.6494;VDB=0.196919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.4:34011758 chr04:034011758 0 W/34011758-34011758 FN3387-S SNP G -> T AC=1;AN=184;BQB=0.973476;DP=2685;DP4=1258,1362,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.65728e-08;MQSB=0.977978;RPB=0.46073;SGB=35.7479;VDB=0.599178;EFF=START_GAINED(LOW||||749|LOC_Os04g57060|protein_coding|CODING|LOC_Os04g57060.1|1|1),UTR_5_PRIME(MODIFIER||786||749|LOC_Os04g57060|protein_coding|CODING|LOC_Os04g57060.1|1|1) FN4204-S.SNP.4:34021159 chr04:034021159 0 W/34021159-34021159 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.97743;DP=2465;DP4=1211,1187,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.00994e-05;MQSB=0.920055;RPB=0.263671;SGB=25.6601;VDB=0.802329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.4:34025892 chr04:034025892 0 W/34025892-34025892 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.966254;DP=4549;DP4=2017,2198,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13067e-10;MQSB=0.803091;RPB=0.863259;SGB=34.6953;VDB=0.531046;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W150*|789|LOC_Os04g57100|protein_coding|CODING|LOC_Os04g57100.1|1|1);LOF=(LOC_Os04g57100|LOC_Os04g57100|1|1.00);NMD=(LOC_Os04g57100|LOC_Os04g57100|1|1.00) FN2640-S.SNP.4:34028171 chr04:034028171 0 W/34028171-34028171 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.60953;DP=4971;DP4=2481,2223,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.08811e-12;MQSB=0.991108;RPB=0.920729;SGB=14.3054;VDB=0.922608;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S694|789|LOC_Os04g57100|protein_coding|CODING|LOC_Os04g57100.1|6|1) FN2307.SNP.4:34029978 chr04:034029978 0 W/34029978-34029978 FN2307 SNP G -> A AC=1;AN=192;BQB=0.999189;DP=4441;DP4=2138,2054,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000225175;MQB=4.44227e-11;MQSB=0.876427;RPB=0.880468;SGB=19.8696;VDB=0.0521863;EFF=INTRON(MODIFIER||||1512|LOC_Os04g57110|protein_coding|CODING|LOC_Os04g57110.1|7|1) FN2674-S.SNP.4:34036281 chr04:034036281 0 W/34036281-34036281 FN2674-S SNP C -> A AC=1;AN=200;BQB=0.933543;DP=4865;DP4=2232,2329,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99002e-14;MQSB=0.99307;RPB=0.840971;SGB=90.7419;VDB=0.55557;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.4:34045794 chr04:034045794 0 W/34045794-34045794 FN703-S Single Base Substitution A-T INTRON HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN465-S.SNP.4:34054938 chr04:034054938 0 W/34054938-34054938 FN465-S Single Base Substitution G-A INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2314.SNP.4:34055874 chr04:034055874 0 W/34055874-34055874 FN2314 SNP A -> C AC=1;AN=192;BQB=0.884932;DP=5438;DP4=2652,2499,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28215e-09;MQSB=0.990495;RPB=0.804041;SGB=43.3444;VDB=0.953432;EFF=INTRON(MODIFIER||||157|LOC_Os04g57150|protein_coding|CODING|LOC_Os04g57150.1|2|1),INTRON(MODIFIER||||157|LOC_Os04g57150|protein_coding|CODING|LOC_Os04g57150.2|2|1) FN2134-S.SNP.4:34085242 chr04:034085242 0 W/34085242-34085242 FN2134-S SNP G -> C AC=1;AN=168;BQB=0.988357;DP=4336;DP4=2055,2238,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.28407e-12;MQSB=0.952008;RPB=0.898419;SGB=-43.4892;VDB=0.437529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R227T|486|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R33T|292|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.2|5|1),UTR_5_PRIME(MODIFIER||29||250|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.3|4|1) FN3659-S.SNP.4:34087049 chr04:034087049 0 W/34087049-34087049 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.826138;DP=2690;DP4=1310,1268,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.72377e-07;MQSB=0.998214;RPB=0.417223;SGB=39.6545;VDB=0.338877;EFF=INTRON(MODIFIER||||486|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.1|11|1),INTRON(MODIFIER||||292|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.2|10|1),INTRON(MODIFIER||||250|LOC_Os04g57210|protein_coding|CODING|LOC_Os04g57210.3|9|1) FN950-S.SNP.4:34093170 chr04:034093170 0 W/34093170-34093170 FN950-S Single Base Substitution C-T INTRON HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-307.SNP.4:34096576 chr04:034096576 0 W/34096576-34096576 FN-307 Single Base Substitution C-T INTRON HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3905-S.SNP.4:34101932 chr04:034101932 0 W/34101932-34101932 FN3905-S SNP T -> A AC=1;AN=158;BQB=0.822308;DP=2839;DP4=1358,1383,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0038746;MQB=6.3016e-05;MQSB=1.30584e-07;RPB=0.999998;SGB=37.4429;VDB=0.626267;EFF=INTRON(MODIFIER||||69|LOC_Os04g57260|protein_coding|CODING|LOC_Os04g57260.1|1|1) FN890-S.SNP.4:34102259 chr04:034102259 0 W/34102259-34102259 FN890-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g57260 expressed protein SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2752-S.SNP.4:34110384 chr04:034110384 0 W/34110384-34110384 FN2752-S SNP G -> T AC=2;AN=200;BQB=0.846791;DP=4215;DP4=1986,1877,7,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.91907e-13;MQSB=0.391073;RPB=0.958229;SGB=95.7111;VDB=0.100776;EFF=START_GAINED(LOW||||420|LOC_Os04g57290|protein_coding|CODING|LOC_Os04g57290.1|1|1),UTR_5_PRIME(MODIFIER||96||420|LOC_Os04g57290|protein_coding|CODING|LOC_Os04g57290.1|1|1) FN3442-S.SNP.4:34117341 chr04:034117341 0 W/34117341-34117341 FN3442-S SNP C -> A AC=1;AN=184;BQB=0.991102;DP=2693;DP4=1179,1425,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35876e-05;MQSB=0.999842;RPB=0.980028;SGB=25.1826;VDB=0.465515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.4:34117526 chr04:034117526 0 W/34117526-34117526 FN2675-S SNP A -> C AC=1;AN=200;BQB=0.98452;DP=5148;DP4=2330,2652,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86957e-18;MQSB=0.735918;RPB=0.789607;SGB=137.158;VDB=0.985337;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.4:34119903 chr04:034119903 0 W/34119903-34119903 FN773-S Single Base Substitution A-T INTRON HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN561-S.SNP.4:34130330 chr04:034130330 0 W/34130330-34130330 FN561-S Single Base Substitution G-A INTRON HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2690-S.SNP.4:34146918 chr04:034146918 0 W/34146918-34146918 FN2690-S SNP T -> A AC=1;AN=200;BQB=0.63675;DP=4937;DP4=2302,2374,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.98153e-06;MQSB=0.514282;RPB=0.0666663;SGB=3.06925;VDB=0.214264;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.4:34157473 chr04:034157473 0 W/34157473-34157473 FN1668-S SNP G -> A AC=1;AN=188;BQB=0.700668;DP=3513;DP4=1707,1766,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.15088e-13;MQSB=0.989778;RPB=0.99111;SGB=67.8739;VDB=0.809795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T255I|430|LOC_Os04g57400|protein_coding|CODING|LOC_Os04g57400.1|4|1) FN1325-S.SNP.4:34160877 chr04:034160877 0 W/34160877-34160877 FN1325-S Single Base Substitution G-T INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2701-S.SNP.4:34177408 chr04:034177408 0 W/34177408-34177408 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.996885;DP=4612;DP4=2289,2046,10,4;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0565915;MQB=0.812066;MQSB=0;RPB=0.523748;SGB=21.6694;VDB=0.415823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.4:34182348 chr04:034182348 0 W/34182348-34182348 FN1401-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3357-S.SNP.4:34182906 chr04:034182906 0 W/34182906-34182906 FN3357-S SNP C -> T AC=2;AN=184;BQB=0.357447;DP=3323;DP4=1602,1580,16,11;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.114956;MQB=0.919033;MQSB=4.52494e-16;RPB=0.584204;SGB=116.569;VDB=0.881356;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1761|1827|LOC_Os04g57460|protein_coding|CODING|LOC_Os04g57460.1|4|1) FN1514-S.SNP.4:34183835 chr04:034183835 0 W/34183835-34183835 FN1514-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g57460 retrotransposon protein, putative, unclassified, expressed SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2196-S.SNP.4:34189673 chr04:034189673 0 W/34189673-34189673 FN2196-S SNP C -> A AC=2;AN=190;BQB=3.17184e-06;DP=3325;DP4=1078,1963,16,28;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.0706767;MQB=0.945087;MQSB=0.0140841;RPB=0.96645;SGB=97.7221;VDB=0.864589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.4:34191992 chr04:034191992 0 W/34191992-34191992 FN3324-S SNP G -> A AC=2;AN=184;BQB=0.617593;DP=3251;DP4=1381,1755,17,19;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0.00738234;MQB=0.00189019;MQSB=8.51705e-33;RPB=0.976424;SGB=-4.80003;VDB=0.384439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.4:34207617 chr04:034207617 0 W/34207617-34207617 FN3861-S SNP G -> T AC=2;AN=158;BQB=0.0187965;DP=2561;DP4=1356,1082,8,5;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=0.086197;MQSB=0.937942;RPB=0.988116;SGB=16.7104;VDB=0.960145;EFF=INTRON(MODIFIER||||490|LOC_Os04g57490|protein_coding|CODING|LOC_Os04g57490.1|1|1) FN1357-S.SNP.4:34208238 chr04:034208238 0 W/34208238-34208238 FN1357-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1179-S.SNP.4:34215226 chr04:034215226 0 W/34215226-34215226 FN1179-S Single Base Substitution G-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2656-S.SNP.4:34215226 chr04:034215226 0 W/34215226-34215226 FN2656-S SNP G -> T AC=2;AN=200;BQB=0.586312;DP=4685;DP4=2405,2011,49,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=0;MQSB=0.74105;RPB=0.990633;SGB=308.513;VDB=0.485952;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.4:34215226 chr04:034215226 0 W/34215226-34215226 FN541-S Single Base Substitution G-T INTERGENIC HOMO SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2224-S.SNP.4:34218823 chr04:034218823 0 W/34218823-34218823 FN2224-S SNP T -> G AC=2;AN=190;BQB=0.999393;DP=5305;DP4=2688,2262,35,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.55343e-35;MQSB=0.645115;RPB=0.207336;SGB=143.692;VDB=0.21103;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W193G|459|LOC_Os04g57520|protein_coding|CODING|LOC_Os04g57520.1|5|1) FN2471.SNP.4:34218823 chr04:034218823 0 W/34218823-34218823 FN2471 SNP T -> G AC=1;AN=200;BQB=0.384429;DP=5214;DP4=2652,2271,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26696e-19;MQSB=0.993272;RPB=0.805337;SGB=108.768;VDB=0.0446055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W193G|459|LOC_Os04g57520|protein_coding|CODING|LOC_Os04g57520.1|5|1) FN3457-S.SNP.4:34218823 chr04:034218823 0 W/34218823-34218823 FN3457-S SNP T -> G AC=2;AN=184;BQB=0.995721;DP=2685;DP4=1402,1163,10,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.39659e-10;MQSB=0.976715;RPB=0.311919;SGB=53.3568;VDB=0.480731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W193G|459|LOC_Os04g57520|protein_coding|CODING|LOC_Os04g57520.1|5|1) FN3653-S.SNP.4:34218823 chr04:034218823 0 W/34218823-34218823 FN3653-S SNP T -> G AC=1;AN=190;BQB=0.998373;DP=2939;DP4=1474,1333,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18443e-08;MQSB=0.988352;RPB=0.861107;SGB=39.6545;VDB=0.383334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W193G|459|LOC_Os04g57520|protein_coding|CODING|LOC_Os04g57520.1|5|1) FN554-S.SNP.4:34226290 chr04:034226290 0 W/34226290-34226290 FN554-S Single Base Substitution T-C INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2380.SNP.4:34231603 chr04:034231603 0 W/34231603-34231603 FN2380 SNP T -> C AC=1;AN=192;BQB=0.544351;DP=5380;DP4=2287,2706,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7302e-06;MQSB=0.622507;RPB=0.998451;SGB=28.9139;VDB=0.362378;EFF=INTRON(MODIFIER||||390|LOC_Os04g57530|protein_coding|CODING|LOC_Os04g57530.1|1|1) FN2575-S.SNP.4:34233484 chr04:034233484 0 W/34233484-34233484 FN2575-S SNP G -> C AC=1;AN=198;BQB=0.748537;DP=3562;DP4=1650,1671,10,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.0425e-12;MQSB=0.949106;RPB=0.0744764;SGB=76.1002;VDB=0.118968;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.4:34242041 chr04:034242041 0 W/34242041-34242041 FN495-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g57550 amine oxidase, flavin-containing, domain containing protein, expressed SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN784-S.SNP.4:34246778 chr04:034246778 0 W/34246778-34246778 FN784-S Single Base Substitution G-T INTRON HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2166-S.SNP.4:34248074 chr04:034248074 0 W/34248074-34248074 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.00103496;DP=2548;DP4=1093,1384,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.59762e-05;MQSB=0.784787;RPB=0.88128;SGB=-63.3606;VDB=0.543356;EFF=UTR_5_PRIME(MODIFIER||199||492|LOC_Os04g57560|protein_coding|CODING|LOC_Os04g57560.1|1|1) FN669-S.SNP.4:34248420 chr04:034248420 0 W/34248420-34248420 FN669-S Single Base Substitution A-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1224-S.SNP.4:34266962 chr04:034266962 0 W/34266962-34266962 FN1224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3916-S.SNP.4:34266962 chr04:034266962 0 W/34266962-34266962 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.982956;DP=2346;DP4=1258,992,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.39241e-06;MQSB=0.972937;RPB=0.1279;SGB=27.3346;VDB=0.0617175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.4:34275717 chr04:034275717 0 W/34275717-34275717 FN2788-S SNP A -> T AC=2;AN=198;BQB=0.956003;DP=4217;DP4=2028,1997,17,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.42293e-27;MQSB=0.896041;RPB=0.936297;SGB=214.973;VDB=0.397046;EFF=INTRON(MODIFIER||||711|LOC_Os04g57600|protein_coding|CODING|LOC_Os04g57600.1|1|1) FN3810-S.SNP.4:34275795 chr04:034275795 0 W/34275795-34275795 FN3810-S SNP G -> A AC=2;AN=190;BQB=0.968799;DP=2425;DP4=1122,1227,9,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.9554e-08;MQSB=0.884251;RPB=0.617046;SGB=62.7569;VDB=0.093681;EFF=INTRON(MODIFIER||||711|LOC_Os04g57600|protein_coding|CODING|LOC_Os04g57600.1|1|1) FN2538-S.SNP.4:34276714 chr04:034276714 0 W/34276714-34276714 FN2538-S SNP T -> A AC=1;AN=198;BQB=0.329619;DP=3954;DP4=2041,1670,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16386e-11;MQSB=0.712171;RPB=0.999997;SGB=72.5051;VDB=0.960315;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.4:34282904 chr04:034282904 0 W/34282904-34282904 FN-199 Single Base Substitution A-G INTRON HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4148-S.SNP.4:34286733 chr04:034286733 0 W/34286733-34286733 FN4148-S SNP G -> C AC=1;AN=170;BQB=0.980865;DP=2325;DP4=1151,1101,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04167e-09;MQSB=0.973297;RPB=0.853721;SGB=48.6486;VDB=0.745721;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.4:34288033 chr04:034288033 0 W/34288033-34288033 FN1321-S Single Base Substitution T-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN4084-S.SNP.4:34288034 chr04:034288034 0 W/34288034-34288034 FN4084-S SNP A -> T AC=1;AN=182;BQB=0.991498;DP=2818;DP4=1434,1256,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.52561e-05;MQSB=0.991661;RPB=0.99437;SGB=35.0899;VDB=0.573495;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.4:34288034 chr04:034288034 0 W/34288034-34288034 FN950-S Single Base Substitution A-T INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2530-S.SNP.4:34290328 chr04:034290328 0 W/34290328-34290328 FN2530-S SNP T -> A AC=1;AN=198;BQB=0.858479;DP=4397;DP4=1811,2348,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000227428;MQB=6.41246e-11;MQSB=0.766911;RPB=0.821416;SGB=81.7147;VDB=0.658056;EFF=INTERGENIC(MODIFIER||||||||||1) W475-4-2.SNP.4:34296862 chr04:034296862 0 W/34296862-34296862 W475-4-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN4100-S.SNP.4:34297524 chr04:034297524 0 W/34297524-34297524 FN4100-S SNP C -> A AC=1;AN=182;BQB=0.941826;DP=3047;DP4=1342,1622,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.80779e-07;MQSB=0.999238;RPB=0.905218;SGB=44.1115;VDB=0.833739;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.4:34299351 chr04:034299351 0 W/34299351-34299351 FN-286 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os04g57630 phytosulfokine receptor precursor, putative, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN_1017-1.SNP.4:34304085 chr04:034304085 0 W/34304085-34304085 FN_1017-1 Single Base Substitution C-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2358.SNP.4:34319315 chr04:034319315 0 W/34319315-34319315 FN2358 SNP A -> T AC=1;AN=192;BQB=0.00847163;DP=4714;DP4=2287,1989,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74156e-05;MQSB=0.95179;RPB=0.991265;SGB=18.6565;VDB=0.623379;EFF=INTRON(MODIFIER||||1011|LOC_Os04g57640|protein_coding|CODING|LOC_Os04g57640.1|1|1),INTRON(MODIFIER||||959|LOC_Os04g57640|protein_coding|CODING|LOC_Os04g57640.2|1|1) FN2285.SNP.4:34335994 chr04:034335994 0 W/34335994-34335994 FN2285 SNP A -> T AC=1;AN=192;BQB=0.0837352;DP=4001;DP4=1906,1325,11,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.00031802;MQSB=0.0241399;RPB=0.0878106;SGB=-15.8974;VDB=0.795138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L218M|719|LOC_Os04g57670|protein_coding|CODING|LOC_Os04g57670.1|1|1) FN3976-S.SNP.4:34337625 chr04:034337625 0 W/34337625-34337625 FN3976-S SNP A -> G AC=1;AN=168;BQB=0.998811;DP=2722;DP4=1359,1237,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.39997e-08;MQSB=0.735826;RPB=0.960411;SGB=41.6096;VDB=0.731125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.4:34338172 chr04:034338172 0 W/34338172-34338172 FN1224-S Single Base Substitution G-A INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN-409.SNP.4:34338379 chr04:034338379 0 W/34338379-34338379 FN-409 Single Base Substitution A-G INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3442-S.SNP.4:34340251 chr04:034340251 0 W/34340251-34340251 FN3442-S SNP C -> T AC=1;AN=184;BQB=0.999753;DP=2535;DP4=1317,1074,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.24705e-07;MQSB=0.991142;RPB=0.0544649;SGB=53.2642;VDB=0.0393765;EFF=SPLICE_SITE_REGION(LOW||||253|LOC_Os04g57680|protein_coding|CODING|LOC_Os04g57680.1|3|1),SPLICE_SITE_REGION(LOW||||194|LOC_Os04g57680|protein_coding|CODING|LOC_Os04g57680.2|3|1),INTRON(MODIFIER||||253|LOC_Os04g57680|protein_coding|CODING|LOC_Os04g57680.1|3|1),INTRON(MODIFIER||||194|LOC_Os04g57680|protein_coding|CODING|LOC_Os04g57680.2|3|1) FN4043-S.SNP.4:34342587 chr04:034342587 0 W/34342587-34342587 FN4043-S SNP G -> A AC=1;AN=168;BQB=0.995434;DP=2451;DP4=1056,1290,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.15901e-08;MQSB=0.702269;RPB=0.520447;SGB=74.3269;VDB=0.0713683;EFF=UTR_5_PRIME(MODIFIER||219||448|LOC_Os04g57690|protein_coding|CODING|LOC_Os04g57690.1|1|1) FN-189.SNP.4:34349722 chr04:034349722 0 W/34349722-34349722 FN-189 Single Base Substitution A-G INTRON HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2439.SNP.4:34361977 chr04:034361977 0 W/34361977-34361977 FN2439 SNP T -> A AC=1;AN=200;BQB=0.0706658;DP=5244;DP4=2392,2513,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35239e-07;MQSB=0.661503;RPB=0.991254;SGB=-11.2947;VDB=0.798958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.4:34362475 chr04:034362475 0 W/34362475-34362475 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.00456857;DP=4290;DP4=2309,1941,7,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.47319e-08;MQSB=0.90174;RPB=0.720804;SGB=-137.195;VDB=0.97948;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.4:34367384 chr04:034367384 0 W/34367384-34367384 FN526-S Single Base Substitution G-A INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-236.SNP.4:34368251 chr04:034368251 0 W/34368251-34368251 FN-236 Single Base Substitution A-G INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1119-S.SNP.4:34373006 chr04:034373006 0 W/34373006-34373006 FN1119-S Single Base Substitution G-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1119-S.SNP.4:34373007 chr04:034373007 0 W/34373007-34373007 FN1119-S Single Base Substitution A-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1730-S.SNP.4:34375855 chr04:034375855 0 W/34375855-34375855 FN1730-S SNP T -> G AC=1;AN=188;BQB=0.799071;DP=2100;DP4=647,1403,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.13735e-06;MQSB=0.953001;RPB=0.968193;SGB=21.8113;VDB=0.922502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.4:34379415 chr04:034379415 0 W/34379415-34379415 FN2210-S SNP T -> C AC=1;AN=190;BQB=0.975996;DP=4451;DP4=2270,1813,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000449337;MQB=8.56741e-05;MQSB=0.657838;RPB=0.88752;SGB=13.4442;VDB=0.704051;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.4:34380460 chr04:034380460 0 W/34380460-34380460 FN993-S Single Base Substitution G-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2108-S.SNP.4:34387657 chr04:034387657 0 W/34387657-34387657 FN2108-S SNP G -> A AC=1;AN=168;BQB=0.650068;DP=1413;DP4=543,786,2,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0026469;MQSB=0.785479;RPB=0.89802;SGB=5.1694;VDB=0.549853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S36L|303|LOC_Os04g57730|protein_coding|CODING|LOC_Os04g57730.1|1|1) FN_827-1.SNP.4:34390747 chr04:034390747 0 W/34390747-34390747 FN_827-1 Single Base Substitution A-C HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN_827-1.SNP.4:34390748 chr04:034390748 0 W/34390748-34390748 FN_827-1 Single Base Substitution C-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2620-S.SNP.4:34391601 chr04:034391601 0 W/34391601-34391601 FN2620-S SNP T -> A AC=1;AN=198;BQB=0.0905135;DP=4273;DP4=2067,1980,8,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.51692e-12;MQSB=0.920164;RPB=0.812196;SGB=118.476;VDB=0.762206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.4:34402748 chr04:034402748 0 W/34402748-34402748 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.916434;DP=3198;DP4=1675,1382,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91384e-09;MQSB=0.986615;RPB=0.995741;SGB=53.8699;VDB=0.00417159;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.4:34407048 chr04:034407048 0 W/34407048-34407048 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.8916;DP=2807;DP4=1206,1414,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.50816e-06;MQSB=0.950861;RPB=0.996347;SGB=35.0899;VDB=0.191968;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G85|307|LOC_Os04g57770|protein_coding|CODING|LOC_Os04g57770.1|1|1) FN4087-S.SNP.4:34407049 chr04:034407049 0 W/34407049-34407049 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.907019;DP=2814;DP4=1233,1427,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.56403e-07;MQSB=0.987026;RPB=0.998485;SGB=39.6007;VDB=0.0830572;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R86*|307|LOC_Os04g57770|protein_coding|CODING|LOC_Os04g57770.1|1|1) W23-2-1.SNP.4:34415410 chr04:034415410 0 W/34415410-34415410 W23-2-1 Single Base Substitution T-C UTR_3_PRIME HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN224-S.SNP.4:34416251 chr04:034416251 0 W/34416251-34416251 FN224-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1064-S.SNP.4:34421257 chr04:034421257 0 W/34421257-34421257 FN1064-S Single Base Substitution G-T INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN-164.SNP.4:34426439 chr04:034426439 0 W/34426439-34426439 FN-164 Single Base Substitution G-T INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN3548-S.SNP.4:34427239 chr04:034427239 0 W/34427239-34427239 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.99868;DP=2760;DP4=1052,1627,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.81251e-09;MQSB=0.923861;RPB=0.585283;SGB=26.0762;VDB=0.268925;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.4:34433053 chr04:034433053 0 W/34433053-34433053 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.989497;DP=2908;DP4=1025,1803,5,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3174e-11;MQSB=0.985574;RPB=0.785931;SGB=58.9766;VDB=0.791616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1501-S.SNP.4:34433767 chr04:034433767 0 W/34433767-34433767 FN1501-S Single Base Substitution G-T INTERGENIC Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1175-S.SNP.4:34438609 chr04:034438609 0 W/34438609-34438609 FN1175-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2541-S.SNP.4:34445258 chr04:034445258 0 W/34445258-34445258 FN2541-S SNP C -> T AC=2;AN=198;BQB=0.560179;DP=3567;DP4=1561,1781,16,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.2016e-19;MQSB=0.973148;RPB=0.568771;SGB=122.837;VDB=0.400084;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V459|558|LOC_Os04g57850|protein_coding|CODING|LOC_Os04g57850.1|2|1) FN2398.SNP.4:34455195 chr04:034455195 0 W/34455195-34455195 FN2398 SNP C -> T AC=1;AN=200;BQB=0.585505;DP=5352;DP4=2558,2558,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17931e-06;MQSB=0.967651;RPB=0.690314;SGB=29.4541;VDB=0.908216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.4:34459052 chr04:034459052 0 W/34459052-34459052 FN1546-S Single Base Substitution T-G INTRON HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN2463.SNP.4:34460425 chr04:034460425 0 W/34460425-34460425 FN2463 SNP T -> A AC=2;AN=200;BQB=0.574179;DP=4876;DP4=2282,2267,26,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.79157e-28;MQSB=0.689906;RPB=0.439925;SGB=197.025;VDB=0.0761689;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G469|1002|LOC_Os04g57870|protein_coding|CODING|LOC_Os04g57870.1|4|1) FN2463.SNP.4:34460426 chr04:034460426 0 W/34460426-34460426 FN2463 SNP C -> A AC=2;AN=200;BQB=0.826321;DP=4879;DP4=2270,2272,25,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.29929e-27;MQSB=0.739319;RPB=0.317572;SGB=192.42;VDB=0.0884918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G469V|1002|LOC_Os04g57870|protein_coding|CODING|LOC_Os04g57870.1|4|1) FN3803-S.SNP.4:34467952 chr04:034467952 0 W/34467952-34467952 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.843579;DP=2578;DP4=1097,1260,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13986e-12;MQSB=0.49701;RPB=0.49709;SGB=46.6446;VDB=0.534561;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.4:34472570 chr04:034472570 0 W/34472570-34472570 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN3347-S.SNP.4:34474509 chr04:034474509 0 W/34474509-34474509 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.982034;DP=2722;DP4=1370,1272,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07308e-06;MQSB=0.998887;RPB=0.464957;SGB=35.1773;VDB=0.435726;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.4:34479039 chr04:034479039 0 W/34479039-34479039 FN4229-S SNP A -> G AC=1;AN=170;BQB=0.946429;DP=2681;DP4=1487,1119,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.2458e-05;MQSB=0.829188;RPB=0.890186;SGB=25.6601;VDB=0.221757;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.4:34493194 chr04:034493194 0 W/34493194-34493194 FN3332-S SNP T -> C AC=1;AN=184;BQB=0.994588;DP=2682;DP4=1209,1380,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.76889e-07;MQSB=0.872841;RPB=0.894485;SGB=35.7479;VDB=0.60361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K634E|721|LOC_Os04g57890|protein_coding|CODING|LOC_Os04g57890.1|4|1) FN-275.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN-275 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1142-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN1142-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1751-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.801251;DP=3305;DP4=1340,1927,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.87396e-09;MQSB=0.970042;RPB=0.82465;SGB=-83.9838;VDB=0.0494367;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A431|540|LOC_Os04g57900|protein_coding|CODING|LOC_Os04g57900.1|1|1) FN4184-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN4184-S SNP C -> T AC=2;AN=170;BQB=0.724916;DP=2480;DP4=1139,1269,16,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.2415e-12;MQSB=0.840254;RPB=0.870395;SGB=110.069;VDB=0.19908;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A431|540|LOC_Os04g57900|protein_coding|CODING|LOC_Os04g57900.1|1|1) FN480-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN480-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN540-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN540-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN739-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN739-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.4:34499168 chr04:034499168 0 W/34499168-34499168 FN988-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4021-S.SNP.4:34501819 chr04:034501819 0 W/34501819-34501819 FN4021-S SNP C -> A AC=1;AN=168;BQB=0.913019;DP=2351;DP4=1104,1158,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.0806e-08;MQSB=0.689318;RPB=0.651044;SGB=52.1728;VDB=0.385426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M115I|184|LOC_Os04g57910|protein_coding|CODING|LOC_Os04g57910.1|2|1) FN1501-S.SNP.4:34505391 chr04:034505391 0 W/34505391-34505391 FN1501-S Single Base Substitution C-T INTERGENIC Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2229-S.SNP.4:34518381 chr04:034518381 0 W/34518381-34518381 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.155943;DP=4679;DP4=2402,1950,19,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.79974e-12;MQSB=0.908049;RPB=0.756199;SGB=110.732;VDB=0.788715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.4:34520290 chr04:034520290 0 W/34520290-34520290 FN3830-S SNP T -> A AC=2;AN=190;BQB=0.897113;DP=2771;DP4=1237,1385,17,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.39281e-14;MQSB=0.867512;RPB=0.973493;SGB=85.8548;VDB=0.0743551;EFF=INTRON(MODIFIER||||469|LOC_Os04g57950|protein_coding|CODING|LOC_Os04g57950.1|1|1) FN2749-S.SNP.4:34520291 chr04:034520291 0 W/34520291-34520291 FN2749-S SNP A -> T AC=1;AN=200;BQB=0.862515;DP=4938;DP4=2397,2321,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31438e-09;MQSB=0.972728;RPB=0.54841;SGB=29.4849;VDB=0.066583;EFF=INTRON(MODIFIER||||469|LOC_Os04g57950|protein_coding|CODING|LOC_Os04g57950.1|1|1) FN2657-S.SNP.4:34533603 chr04:034533603 0 W/34533603-34533603 FN2657-S SNP A -> T AC=1;AN=200;BQB=0.820412;DP=4576;DP4=2132,2255,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73693e-11;MQSB=0.983425;RPB=0.0657575;SGB=77.2904;VDB=0.211353;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.4:34544376 chr04:034544376 0 W/34544376-34544376 FN4075-S SNP A -> G AC=1;AN=182;BQB=0.380561;DP=2715;DP4=1487,1103,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0248e-06;MQSB=0.00671783;RPB=0.580142;SGB=39.6007;VDB=0.681428;EFF=INTRON(MODIFIER||||433|LOC_Os04g58000|protein_coding|CODING|LOC_Os04g58000.1|2|1) FN4075-S.SNP.4:34544380 chr04:034544380 0 W/34544380-34544380 FN4075-S SNP C -> A AC=1;AN=182;BQB=0.282243;DP=2724;DP4=1492,1082,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.25538e-07;MQSB=0.00597856;RPB=0.860049;SGB=15.6115;VDB=0.956605;EFF=INTRON(MODIFIER||||433|LOC_Os04g58000|protein_coding|CODING|LOC_Os04g58000.1|2|1) FN2715-S.SNP.4:34548856 chr04:034548856 0 W/34548856-34548856 FN2715-S SNP T -> C AC=1;AN=200;BQB=0.904035;DP=4924;DP4=2362,2328,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.6606e-15;MQSB=0.989102;RPB=0.622412;SGB=-7.05853;VDB=0.17697;EFF=INTRON(MODIFIER||||530|LOC_Os04g58010|protein_coding|CODING|LOC_Os04g58010.1|6|1) FN2618-S.SNP.4:34552812 chr04:034552812 0 W/34552812-34552812 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.994503;DP=3570;DP4=1446,1913,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.0485e-13;MQSB=0.733657;RPB=0.912639;SGB=44.9151;VDB=0.962147;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T73|530|LOC_Os04g58010|protein_coding|CODING|LOC_Os04g58010.1|1|1) FN1300-S.SNP.4:34557802 chr04:034557802 0 W/34557802-34557802 FN1300-S Single Base Substitution G-C INTRON HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN-277.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN-277 Single Base Substitution T-A INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1067-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN1067-S Single Base Substitution T-A INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1216-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN1216-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1399-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN1399-S Single Base Substitution T-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1545-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN1545-S Single Base Substitution T-A INTERGENIC Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1742-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN1742-S SNP T -> A AC=2;AN=188;BQB=0.785654;DP=4461;DP4=2145,2216,21,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.1606e-19;MQSB=0.969505;RPB=0.979396;SGB=-47.8688;VDB=0.000164668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN2229-S SNP T -> A AC=2;AN=190;BQB=0.939628;DP=4840;DP4=2272,2240,24,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92516e-26;MQSB=0.914052;RPB=0.386241;SGB=115.599;VDB=0.805722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN2320 SNP T -> A AC=1;AN=192;BQB=0.939916;DP=4968;DP4=2362,2347,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.52244e-14;MQSB=0.996373;RPB=0.633991;SGB=22.9983;VDB=0.689556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN3363-S SNP T -> A AC=2;AN=184;BQB=0.877597;DP=2889;DP4=1406,1366,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.79225e-12;MQSB=0.993443;RPB=0.769851;SGB=53.5365;VDB=0.123765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN3627-S SNP T -> A AC=1;AN=190;BQB=0.933704;DP=2985;DP4=1388,1498,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.36833e-10;MQSB=0.996392;RPB=0.647129;SGB=53.8699;VDB=0.141466;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN414-S Single Base Substitution T-A INTERGENIC HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN4247-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN4247-S SNP T -> A AC=1;AN=170;BQB=0.666502;DP=2395;DP4=1291,1051,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31094e-05;MQSB=0.998939;RPB=0.975831;SGB=14.9986;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN561-S Single Base Substitution T-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN943-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN943-S Single Base Substitution T-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN960-S.SNP.4:34563303 chr04:034563303 0 W/34563303-34563303 FN960-S Single Base Substitution T-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN-92.SNP.4:34568658 chr04:034568658 0 W/34568658-34568658 FN-92 Single Base Substitution G-A INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2358.SNP.4:34571123 chr04:034571123 0 W/34571123-34571123 FN2358 SNP A -> G AC=1;AN=192;BQB=0.98588;DP=5113;DP4=2404,2417,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00039116;MQB=2.71996e-07;MQSB=0.993723;RPB=0.999998;SGB=23.7852;VDB=0.0961008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.4:34583748 chr04:034583748 0 W/34583748-34583748 FN3832-S SNP C -> A AC=1;AN=190;BQB=0.967277;DP=3081;DP4=1414,1579,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68028e-09;MQSB=0.981994;RPB=0.341003;SGB=58.2031;VDB=0.182585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L224I|391|LOC_Os04g58060|protein_coding|CODING|LOC_Os04g58060.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L224I|391|LOC_Os04g58060|protein_coding|CODING|LOC_Os04g58060.2|9|1) FN-161.SNP.4:34592015 chr04:034592015 0 W/34592015-34592015 FN-161 Single Base Substitution A-G INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2597-S.SNP.4:34594279 chr04:034594279 0 W/34594279-34594279 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.0831783;DP=4610;DP4=1809,2433,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000433839;MQB=2.22529e-09;MQSB=0.259255;RPB=0.950966;SGB=-68.2549;VDB=0.789458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.4:34594860 chr04:034594860 0 W/34594860-34594860 FN1448-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1651-S.SNP.4:34600717 chr04:034600717 0 W/34600717-34600717 FN1651-S Single Base Substitution A-T INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN-76.SNP.4:34601586 chr04:034601586 0 W/34601586-34601586 FN-76 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN3979-S.SNP.4:34605047 chr04:034605047 0 W/34605047-34605047 FN3979-S SNP T -> C AC=1;AN=168;BQB=0.993758;DP=3108;DP4=1315,1581,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34085e-13;MQSB=0.959267;RPB=0.690056;SGB=21.3605;VDB=0.320795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.4:34605693 chr04:034605693 0 W/34605693-34605693 FN1409-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN679-S.SNP.4:34609847 chr04:034609847 0 W/34609847-34609847 FN679-S Single Base Substitution A-T INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2702-S.SNP.4:34612228 chr04:034612228 0 W/34612228-34612228 FN2702-S SNP A -> G AC=1;AN=200;BQB=0.876618;DP=5190;DP4=2387,2524,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.03678e-12;MQSB=0.999912;RPB=0.996736;SGB=39.9056;VDB=0.260651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.4:34614405 chr04:034614405 0 W/34614405-34614405 FN2421 SNP C -> T AC=1;AN=200;BQB=0.187743;DP=4752;DP4=1999,2371,13,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63535e-09;MQSB=0.934849;RPB=0.16342;SGB=-35.3156;VDB=0.528391;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G921|938|LOC_Os04g58130|protein_coding|CODING|LOC_Os04g58130.1|18|1) FN-82.SNP.4:34615990 chr04:034615990 0 W/34615990-34615990 FN-82 Single Base Substitution A-T INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN-250.SNP.4:34619626 chr04:034619626 0 W/34619626-34619626 FN-250 Single Base Substitution C-G INTRON HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1133-S.SNP.4:34626586 chr04:034626586 0 W/34626586-34626586 FN1133-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os04g58140 elongation factor Tu, putative, expressed SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1508-S.SNP.4:34627370 chr04:034627370 0 W/34627370-34627370 FN1508-S Single Base Substitution G-C INTRON HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3968-S.SNP.4:34660963 chr04:034660963 0 W/34660963-34660963 FN3968-S SNP A -> T AC=2;AN=168;BQB=0.521593;DP=2795;DP4=1421,1258,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.32537e-15;MQSB=0.664233;RPB=0.423899;SGB=96.5026;VDB=0.279287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.4:34669257 chr04:034669257 0 W/34669257-34669257 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.966664;DP=2914;DP4=1670,1143,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000691544;MQSB=0.806624;RPB=0.996764;SGB=35.4339;VDB=0.371445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.4:34683919 chr04:034683919 0 W/34683919-34683919 FN3394-S SNP A -> C AC=1;AN=184;BQB=0.932974;DP=2850;DP4=1459,1323,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000251978;MQSB=0.99906;RPB=0.955117;SGB=30.6558;VDB=0.85452;EFF=INTRON(MODIFIER||||374|LOC_Os04g58250|protein_coding|CODING|LOC_Os04g58250.1|1|1) FN-394.SNP.4:34688119 chr04:034688119 0 W/34688119-34688119 FN-394 Single Base Substitution C-T INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN_788-1-1.SNP.4:34699721 chr04:034699721 0 W/34699721-34699721 FN_788-1-1 Single Base Substitution G-A HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN775-S.SNP.4:34704331 chr04:034704331 0 W/34704331-34704331 FN775-S Single Base Substitution G-A INTRON HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-310.SNP.4:34704378 chr04:034704378 0 W/34704378-34704378 FN-310 Single Base Substitution C-A INTRON HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN2664-S.SNP.4:34708134 chr04:034708134 0 W/34708134-34708134 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.600441;DP=4988;DP4=2517,2152,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.11701e-17;MQSB=0.506828;RPB=0.4299;SGB=118.737;VDB=0.431303;EFF=INTERGENIC(MODIFIER||||||||||1) N1-130-2.SNP.4:34710987 chr04:034710987 0 W/34710987-34710987 N1-130-2 Single Base Substitution C-T INTERGENIC HET SNo: 1377, Mutant_ID: N1-130-2, Generation: M2, Mutations: 30, Genes: 7, Seed availability: Yes. N1-130-3.SNP.4:34710987 chr04:034710987 0 W/34710987-34710987 N1-130-3 Single Base Substitution C-T INTERGENIC HET SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. FN3506-S.SNP.4:34711263 chr04:034711263 0 W/34711263-34711263 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.812648;DP=2895;DP4=1329,1498,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000345423;MQB=6.56118e-08;MQSB=0.654444;RPB=0.698255;SGB=67.1521;VDB=0.780716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.4:34717669 chr04:034717669 0 W/34717669-34717669 FN2602-S SNP G -> T AC=1;AN=198;BQB=0.930433;DP=4516;DP4=1945,2292,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.72789e-12;MQSB=0.974448;RPB=0.654034;SGB=68.91;VDB=0.743036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.4:34717670 chr04:034717670 0 W/34717670-34717670 FN2602-S SNP A -> T AC=1;AN=198;BQB=0.829191;DP=4511;DP4=1921,2262,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15943e-14;MQSB=0.99445;RPB=0.455774;SGB=76.1002;VDB=0.424572;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.4:34730367 chr04:034730367 0 W/34730367-34730367 FN445-S Single Base Substitution G-T STOP_GAINED HET LOC_Os04g58350 TFIIH basal transcription factor complex p52 subunit, putative, expressed SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN968-S.SNP.4:34731484 chr04:034731484 0 W/34731484-34731484 FN968-S Single Base Substitution C-A INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN1484-S.SNP.4:34736804 chr04:034736804 0 W/34736804-34736804 FN1484-S Single Base Substitution A-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. W360-2S-2.SNP.4:34743936 chr04:034743936 0 W/34743936-34743936 W360-2S-2 Single Base Substitution T-C INTRON HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2163-S.SNP.4:34747341 chr04:034747341 0 W/34747341-34747341 FN2163-S SNP C -> A AC=2;AN=168;BQB=0.0474851;DP=4236;DP4=1916,2241,24,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.25264e-20;MQSB=0.959576;RPB=0.761448;SGB=-152.015;VDB=0.0518897;EFF=INTRON(MODIFIER||||374|LOC_Os04g58400|protein_coding|CODING|LOC_Os04g58400.1|4|1) FN2110-S.SNP.4:34760676 chr04:034760676 0 W/34760676-34760676 FN2110-S SNP C -> A AC=1;AN=168;BQB=0.26032;DP=3643;DP4=1906,1701,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34451e-10;MQSB=0.960414;RPB=0.662268;SGB=-68.0681;VDB=0.558736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2110-S.SNP.4:34760677 chr04:034760677 0 W/34760677-34760677 FN2110-S SNP A -> T AC=1;AN=168;BQB=0.0398063;DP=3648;DP4=1902,1708,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3793e-10;MQSB=0.949958;RPB=0.846098;SGB=-68.0681;VDB=0.398802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.4:34768148 chr04:034768148 0 W/34768148-34768148 FN2212-S SNP T -> A AC=2;AN=190;BQB=0.946051;DP=4559;DP4=2129,1890,25,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.84109e-24;MQSB=0.652085;RPB=0.546617;SGB=-54.6155;VDB=0.880147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W161R|185|LOC_Os04g58440|protein_coding|CODING|LOC_Os04g58440.1|3|1) FN2415.SNP.4:34770250 chr04:034770250 0 W/34770250-34770250 FN2415 SNP G -> T AC=1;AN=200;BQB=0.995945;DP=4507;DP4=2273,1991,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221877;MQB=2.48614e-08;MQSB=0.923972;RPB=0.117427;SGB=29.4849;VDB=0.489996;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I1323|1728|LOC_Os04g58450|protein_coding|CODING|LOC_Os04g58450.1|7|1) FN764-S.SNP.4:34773312 chr04:034773312 0 W/34773312-34773312 FN764-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g58450 retrotransposon protein, putative, unclassified, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2488.SNP.4:34782242 chr04:034782242 0 W/34782242-34782242 FN2488 SNP A -> T AC=2;AN=200;BQB=0.798806;DP=5262;DP4=2595,2369,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81662e-24;MQSB=0.558453;RPB=0.269753;SGB=201.63;VDB=0.318677;EFF=INTRON(MODIFIER||||711|LOC_Os04g58470|protein_coding|CODING|LOC_Os04g58470.1|6|1) FN4123-S.SNP.4:34788799 chr04:034788799 0 W/34788799-34788799 FN4123-S SNP C -> T AC=1;AN=182;BQB=0.859357;DP=2770;DP4=1292,1358,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.32909e-11;MQSB=0.933931;RPB=0.549266;SGB=71.1765;VDB=0.0905762;EFF=INTRON(MODIFIER||||364|LOC_Os04g58480|protein_coding|CODING|LOC_Os04g58480.1|2|1) FN-162.SNP.4:34803794 chr04:034803794 0 W/34803794-34803794 FN-162 Single Base Substitution G-A INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN895-S.SNP.4:34805294 chr04:034805294 0 W/34805294-34805294 FN895-S Single Base Substitution C-T INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1651-S.SNP.4:34811673 chr04:034811673 0 W/34811673-34811673 FN1651-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os04g58550 acyl-CoA-binding domain-containing protein 6, putative, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2380.SNP.4:34814691 chr04:034814691 0 W/34814691-34814691 FN2380 SNP T -> C AC=1;AN=192;BQB=0.227747;DP=4509;DP4=1982,2166,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.70571e-06;MQSB=0.18498;RPB=0.996263;SGB=49.2105;VDB=0.815244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N175S|209|LOC_Os04g58555|protein_coding|CODING|LOC_Os04g58555.1|1|1) FN890-S.SNP.4:34819995 chr04:034819995 0 W/34819995-34819995 FN890-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN989-S.SNP.4:34822395 chr04:034822395 0 W/34822395-34822395 FN989-S Single Base Substitution T-A INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2703-S.SNP.4:34823947 chr04:034823947 0 W/34823947-34823947 FN2703-S SNP T -> A AC=2;AN=200;BQB=0.595214;DP=4741;DP4=2040,2438,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.76463e-23;MQSB=0.706911;RPB=0.463398;SGB=51.2243;VDB=0.627803;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.4:34825875 chr04:034825875 0 W/34825875-34825875 FN466-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g58570 C2 domain containing protein, putative, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1674-S.SNP.4:34829683 chr04:034829683 0 W/34829683-34829683 FN1674-S SNP A -> G AC=1;AN=188;BQB=0.137196;DP=2684;DP4=1746,916,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00020161;MQSB=0.686478;RPB=0.96463;SGB=10.8165;VDB=0.882989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T120A|248|LOC_Os04g58580|protein_coding|CODING|LOC_Os04g58580.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T120A|239|LOC_Os04g58580|protein_coding|CODING|LOC_Os04g58580.2|7|1) FN2755-S.SNP.4:34835738 chr04:034835738 0 W/34835738-34835738 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.991405;DP=5021;DP4=2387,2355,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01479e-09;MQSB=0.83688;RPB=0.772745;SGB=72.6852;VDB=0.144495;EFF=INTRON(MODIFIER||||1012|LOC_Os04g58590|protein_coding|CODING|LOC_Os04g58590.1|1|1) FN1692-S.SNP.4:34838182 chr04:034838182 0 W/34838182-34838182 FN1692-S SNP T -> C AC=2;AN=188;BQB=0.0337723;DP=3976;DP4=1980,1945,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.78641e-15;MQSB=0.920199;RPB=0.890625;SGB=-166.286;VDB=0.772422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.4:34838422 chr04:034838422 0 W/34838422-34838422 FN3998-S SNP C -> T AC=2;AN=168;BQB=0.899427;DP=2826;DP4=1595,1130,9,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.43497e-10;MQSB=0.958519;RPB=0.735848;SGB=83.1885;VDB=0.126438;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.4:34843544 chr04:034843544 0 W/34843544-34843544 FN-199 Single Base Substitution T-G INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1436-S.SNP.4:34847074 chr04:034847074 0 W/34847074-34847074 FN1436-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2411.SNP.4:34847283 chr04:034847283 0 W/34847283-34847283 FN2411 SNP G -> A AC=1;AN=200;BQB=0.394777;DP=4556;DP4=2556,1776,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.46458e-07;MQSB=0.939886;RPB=0.0861437;SGB=25.849;VDB=0.342083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.4:34847663 chr04:034847663 0 W/34847663-34847663 FN3388-S SNP A -> C AC=1;AN=184;BQB=0.999495;DP=3268;DP4=1626,1435,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05422e-06;MQSB=0.982147;RPB=0.529622;SGB=48.7425;VDB=0.18368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.4:34863995 chr04:034863995 0 W/34863995-34863995 FN2264-S SNP T -> G AC=1;AN=190;BQB=0.947463;DP=5060;DP4=2211,2468,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197628;MQB=5.91547e-11;MQSB=0.0824882;RPB=0.764789;SGB=41.5369;VDB=0.415263;EFF=INTRON(MODIFIER||||1154|LOC_Os04g58620|protein_coding|CODING|LOC_Os04g58620.1|12|1) FN1022-S.SNP.4:34869379 chr04:034869379 0 W/34869379-34869379 FN1022-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3722-S.SNP.4:34872414 chr04:034872414 0 W/34872414-34872414 FN3722-S SNP C -> G AC=1;AN=190;BQB=0.684391;DP=2912;DP4=1448,1319,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.55066e-11;MQSB=0.788028;RPB=0.662008;SGB=50.3161;VDB=0.999392;EFF=INTRON(MODIFIER||||813|LOC_Os04g58630|protein_coding|CODING|LOC_Os04g58630.2|9|1) FN3373-S.SNP.4:34886243 chr04:034886243 0 W/34886243-34886243 FN3373-S SNP G -> T AC=1;AN=184;BQB=0.96532;DP=2638;DP4=1163,1394,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.17722e-06;MQSB=0.99439;RPB=0.999799;SGB=35.1773;VDB=0.974417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.4:34890346 chr04:034890346 0 W/34890346-34890346 FN1254-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1412-S.SNP.4:34890346 chr04:034890346 0 W/34890346-34890346 FN1412-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3839-S.SNP.4:34890346 chr04:034890346 0 W/34890346-34890346 FN3839-S SNP C -> G AC=1;AN=190;BQB=0.91452;DP=2241;DP4=1077,1058,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72025e-10;MQSB=0.859496;RPB=0.999998;SGB=57.4238;VDB=0.909148;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.4:34890346 chr04:034890346 0 W/34890346-34890346 FN447-S Single Base Substitution C-G INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN868-S.SNP.4:34890346 chr04:034890346 0 W/34890346-34890346 FN868-S Single Base Substitution C-G INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN449-S.SNP.4:34891484 chr04:034891484 0 W/34891484-34891484 FN449-S Single Base Substitution G-A INTERGENIC HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1449-S.SNP.4:34894207 chr04:034894207 0 W/34894207-34894207 FN1449-S Single Base Substitution T-C INTRON HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN1228-S.SNP.4:34904945 chr04:034904945 0 W/34904945-34904945 FN1228-S Single Base Substitution A-T INTRON HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN_398-1.SNP.4:34913099 chr04:034913099 0 W/34913099-34913099 FN_398-1 Single Base Substitution T-A INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN4175-S.SNP.4:34939754 chr04:034939754 0 W/34939754-34939754 FN4175-S SNP C -> A AC=1;AN=170;BQB=0.962484;DP=2870;DP4=1362,1412,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.42013e-11;MQSB=0.996826;RPB=0.350005;SGB=92.2986;VDB=0.0274608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.4:34942412 chr04:034942412 0 W/34942412-34942412 FN3371-S SNP T -> C AC=2;AN=184;BQB=0.852651;DP=3413;DP4=1537,1700,18,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.67128e-20;MQSB=0.992039;RPB=0.738327;SGB=86.3198;VDB=0.620804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.4:34948333 chr04:034948333 0 W/34948333-34948333 FN-146 Single Base Substitution T-A INTRON HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1224-S.SNP.4:34948334 chr04:034948334 0 W/34948334-34948334 FN1224-S Single Base Substitution A-T INTRON HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3871-S.SNP.4:34950318 chr04:034950318 0 W/34950318-34950318 FN3871-S SNP C -> T AC=2;AN=158;BQB=0.999982;DP=2919;DP4=1493,1311,17,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.60311e-17;MQSB=0.980234;RPB=0.0810278;SGB=61.7299;VDB=0.41982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.4:34951424 chr04:034951424 0 W/34951424-34951424 FN3875-S SNP A -> C AC=1;AN=158;BQB=0.999111;DP=2773;DP4=1154,1497,6,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.84365e-12;MQSB=0.462379;RPB=0.672055;SGB=10.3028;VDB=0.4131;EFF=STOP_LOST(HIGH|MISSENSE|tAg/tCg|*225S|224|LOC_Os04g58760|protein_coding|CODING|LOC_Os04g58760.1|3|1) FN1389-S.SNP.4:34955200 chr04:034955200 0 W/34955200-34955200 FN1389-S Single Base Substitution A-G INTERGENIC Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2789-S.SNP.4:34956272 chr04:034956272 0 W/34956272-34956272 FN2789-S SNP G -> A AC=1;AN=198;BQB=0.750706;DP=3908;DP4=1642,2009,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.76812e-09;MQSB=0.806145;RPB=0.762141;SGB=26.7492;VDB=0.619247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1696-S.SNP.4:34960699 chr04:034960699 0 W/34960699-34960699 FN1696-S SNP G -> A AC=1;AN=188;BQB=0.0280291;DP=3966;DP4=2057,1846,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68863e-05;MQSB=0.945211;RPB=0.988529;SGB=-88.8972;VDB=0.865581;EFF=INTRON(MODIFIER||||901|LOC_Os04g58780|protein_coding|CODING|LOC_Os04g58780.1|2|1),INTRON(MODIFIER||||597|LOC_Os04g58780|protein_coding|CODING|LOC_Os04g58780.2|2|1) FN2774-S.SNP.4:34961422 chr04:034961422 0 W/34961422-34961422 FN2774-S SNP T -> C AC=1;AN=198;BQB=0.98706;DP=4058;DP4=1931,1927,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.26899e-09;MQSB=0.960748;RPB=0.925645;SGB=54.5295;VDB=0.154698;EFF=INTRON(MODIFIER||||901|LOC_Os04g58780|protein_coding|CODING|LOC_Os04g58780.1|4|1),INTRON(MODIFIER||||597|LOC_Os04g58780|protein_coding|CODING|LOC_Os04g58780.2|4|1) FN2251-S.SNP.4:34982741 chr04:034982741 0 W/34982741-34982741 FN2251-S SNP G -> A AC=1;AN=190;BQB=0.988346;DP=3905;DP4=1799,1816,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.10808e-05;MQSB=0.157099;RPB=0.519242;SGB=18.3316;VDB=0.052956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.4:34985371 chr04:034985371 0 W/34985371-34985371 FN2116-S SNP C -> T AC=2;AN=168;BQB=0.680607;DP=3930;DP4=1948,1880,28,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.51622e-24;MQSB=0.981372;RPB=0.975291;SGB=-175.138;VDB=0.69044;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.4:34999709 chr04:034999709 0 W/34999709-34999709 FN4078-S SNP A -> G AC=1;AN=182;BQB=0.550157;DP=2974;DP4=1310,1418,11,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.50275e-14;MQSB=0.876788;RPB=0.99436;SGB=40.7201;VDB=0.174192;EFF=INTERGENIC(MODIFIER||||||||||1) FN-197.SNP.4:34999837 chr04:034999837 0 W/34999837-34999837 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2487.SNP.4:35001078 chr04:035001078 0 W/35001078-35001078 FN2487 SNP G -> A AC=1;AN=200;BQB=0.858864;DP=4872;DP4=2207,2358,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205255;MQB=1.65495e-14;MQSB=0.532749;RPB=0.991905;SGB=50.3263;VDB=0.874016;EFF=UTR_3_PRIME(MODIFIER||321||205|LOC_Os04g58850|protein_coding|CODING|LOC_Os04g58850.1|1|1) FN-258.SNP.4:35003253 chr04:035003253 0 W/35003253-35003253 FN-258 Single Base Substitution G-A INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2173-S.SNP.4:35013360 chr04:035013360 0 W/35013360-35013360 FN2173-S SNP A -> G AC=1;AN=168;BQB=0.0155869;DP=3593;DP4=1733,1815,14,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.98349e-12;MQSB=0.940838;RPB=0.0578623;SGB=-83.76;VDB=0.327001;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.4:35014994 chr04:035014994 0 W/35014994-35014994 FN527-S Single Base Substitution G-C INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-291.SNP.4:35029089 chr04:035029089 0 W/35029089-35029089 FN-291 Single Base Substitution A-G INTERGENIC HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN3881-S.SNP.4:35029246 chr04:035029246 0 W/35029246-35029246 FN3881-S SNP G -> A AC=2;AN=158;BQB=0.999464;DP=2378;DP4=1137,1082,17,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.32039e-13;MQSB=0.999964;RPB=0.654262;SGB=45.1437;VDB=0.447614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.4:35029247 chr04:035029247 0 W/35029247-35029247 FN2437 SNP G -> A AC=1;AN=200;BQB=0.47317;DP=5187;DP4=2667,2231,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00019279;MQB=4.54544e-08;MQSB=0.940708;RPB=0.44245;SGB=40.2696;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.4:35051720 chr04:035051720 0 W/35051720-35051720 FN2276-S SNP C -> T AC=1;AN=190;BQB=0.698378;DP=4758;DP4=2033,2523,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40542e-07;MQSB=0.619164;RPB=0.953046;SGB=32.5467;VDB=0.453607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.4:35054121 chr04:035054121 0 W/35054121-35054121 FN2117-S SNP C -> T AC=1;AN=168;BQB=0.745009;DP=3179;DP4=1737,1401,17,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35045e-10;MQSB=0.999943;RPB=0.283026;SGB=39.2004;VDB=0.103779;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.4:35059555 chr04:035059555 0 W/35059555-35059555 FN821-S Single Base Substitution C-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN-344.SNP.4:35063790 chr04:035063790 0 W/35063790-35063790 FN-344 Single Base Substitution A-T INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-287.SNP.4:35072679 chr04:035072679 0 W/35072679-35072679 FN-287 Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN1096-S.SNP.4:35075780 chr04:035075780 0 W/35075780-35075780 FN1096-S Single Base Substitution A-T INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN4110-S.SNP.4:35076005 chr04:035076005 0 W/35076005-35076005 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.919168;DP=2859;DP4=1300,1419,14,15;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=4.15003e-11;MQSB=0.951656;RPB=0.842995;SGB=125.307;VDB=0.448733;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.4:35076283 chr04:035076283 0 W/35076283-35076283 FN-261 Single Base Substitution C-T INTERGENIC HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN993-S.SNP.4:35076634 chr04:035076634 0 W/35076634-35076634 FN993-S Single Base Substitution C-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN3110-S.SNP.4:35084304 chr04:035084304 0 W/35084304-35084304 FN3110-S SNP T -> C AC=1;AN=184;BQB=0.909012;DP=2785;DP4=1267,1435,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.15831e-05;MQSB=0.999971;RPB=0.927583;SGB=21.6609;VDB=0.596363;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.4:35085311 chr04:035085311 0 W/35085311-35085311 FN1179-S Single Base Substitution A-T INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3539-S.SNP.4:35088275 chr04:035088275 0 W/35088275-35088275 FN3539-S SNP C -> T AC=1;AN=188;BQB=0.801181;DP=4501;DP4=2087,2316,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.89745e-07;MQSB=0.993208;RPB=0.977155;SGB=32.441;VDB=0.848205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G246E|882|LOC_Os04g58980|protein_coding|CODING|LOC_Os04g58980.1|1|1) FN3539-S.SNP.4:35088276 chr04:035088276 0 W/35088276-35088276 FN3539-S SNP C -> T AC=1;AN=188;BQB=0.988501;DP=4515;DP4=2075,2321,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.16212e-09;MQSB=0.981934;RPB=0.998838;SGB=18.4463;VDB=0.780419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G246R|882|LOC_Os04g58980|protein_coding|CODING|LOC_Os04g58980.1|1|1) FN1424-S.SNP.4:35088827 chr04:035088827 0 W/35088827-35088827 FN1424-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os04g58980 pentatricopeptide, putative, expressed SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1708-S.SNP.4:35089772 chr04:035089772 0 W/35089772-35089772 FN1708-S SNP T -> A AC=2;AN=188;BQB=0.0305302;DP=3795;DP4=1779,1965,21,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91056e-12;MQSB=0.881457;RPB=0.9992;SGB=-224.65;VDB=0.455507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K241M|275|LOC_Os04g58990|protein_coding|CODING|LOC_Os04g58990.1|7|1) FN3310-S.SNP.4:35100663 chr04:035100663 0 W/35100663-35100663 FN3310-S SNP A -> G AC=2;AN=184;BQB=0.550053;DP=2775;DP4=1433,1223,13,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.50151e-18;MQSB=0.831538;RPB=0.540434;SGB=106.184;VDB=0.711879;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.4:35113097 chr04:035113097 0 W/35113097-35113097 FN4047-S SNP T -> A AC=1;AN=168;BQB=0.893105;DP=2912;DP4=1848,766,17,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.36252e-10;MQSB=0.345531;RPB=0.999555;SGB=55.3328;VDB=0.431458;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.4:35114636 chr04:035114636 0 W/35114636-35114636 FN824-S Single Base Substitution T-G INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2134-S.SNP.4:35117212 chr04:035117212 0 W/35117212-35117212 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.408949;DP=2395;DP4=1583,767,18,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.24649e-08;MQSB=0.729966;RPB=0.995288;SGB=17.068;VDB=0.0860452;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.4:35129238 chr04:035129238 0 W/35129238-35129238 FN-137 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g59060 heat shock protein DnaJ, putative, expressed SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2754-S.SNP.4:35133858 chr04:035133858 0 W/35133858-35133858 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.577451;DP=4587;DP4=2144,2160,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.47355e-06;MQSB=0.96657;RPB=0.281545;SGB=29.4541;VDB=0.52194;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.4:35141658 chr04:035141658 0 W/35141658-35141658 FN781-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2755-S.SNP.4:35149459 chr04:035149459 0 W/35149459-35149459 FN2755-S SNP C -> A AC=1;AN=200;BQB=0.675103;DP=4213;DP4=2152,1777,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1056e-05;MQSB=0.765375;RPB=0.260447;SGB=54.2646;VDB=0.84004;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.4:35154990 chr04:035154990 0 W/35154990-35154990 FN706-S Single Base Substitution C-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN1274-S.SNP.4:35156646 chr04:035156646 0 W/35156646-35156646 FN1274-S Single Base Substitution C-T INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN3490-S.SNP.4:35159243 chr04:035159243 0 W/35159243-35159243 FN3490-S SNP T -> A AC=1;AN=184;BQB=0.348841;DP=3924;DP4=1694,2078,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.15265;MQB=0.607101;MQSB=0;RPB=0.757649;SGB=30.8405;VDB=0.942765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F839Y|1709|LOC_Os04g59100|protein_coding|CODING|LOC_Os04g59100.1|2|1) FN589-S.SNP.4:35162387 chr04:035162387 0 W/35162387-35162387 FN589-S Single Base Substitution T-C INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1277-S.SNP.4:35165654 chr04:035165654 0 W/35165654-35165654 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN-203.SNP.4:35172247 chr04:035172247 0 W/35172247-35172247 FN-203 Single Base Substitution T-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN3773-S.SNP.4:35172248 chr04:035172248 0 W/35172248-35172248 FN3773-S SNP A -> T AC=1;AN=190;BQB=0.939491;DP=2454;DP4=1149,1173,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18611e-07;MQSB=0.832152;RPB=0.30184;SGB=21.1058;VDB=0.00813383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.4:35174680 chr04:035174680 0 W/35174680-35174680 FN3537-S SNP T -> A AC=2;AN=188;BQB=0.920391;DP=2634;DP4=1334,1217,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.24257e-20;MQSB=0.999616;RPB=0.941436;SGB=110.393;VDB=0.311625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.4:35186096 chr04:035186096 0 W/35186096-35186096 FN2259-S SNP T -> A AC=1;AN=190;BQB=0.306529;DP=3262;DP4=873,1598,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00030656;MQB=0.0177921;MQSB=2.40828e-08;RPB=0.960476;SGB=-2.10437;VDB=0.859324;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.4:35189879 chr04:035189879 0 W/35189879-35189879 FN-386 Single Base Substitution G-A INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1547-S.SNP.4:35194317 chr04:035194317 0 W/35194317-35194317 FN1547-S Single Base Substitution C-T INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN-289.SNP.4:35194749 chr04:035194749 0 W/35194749-35194749 FN-289 Single Base Substitution C-T INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. 707-5.SNP.4:35194800 chr04:035194800 0 W/35194800-35194800 707-5 Single Base Substitution T-G INTERGENIC Homo SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. FN3707-S.SNP.4:35198687 chr04:035198687 0 W/35198687-35198687 FN3707-S SNP C -> A AC=1;AN=190;BQB=0.596244;DP=2774;DP4=1256,1323,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00036049;MQB=8.72814e-10;MQSB=0.000123841;RPB=0.8624;SGB=-58.8731;VDB=0.853665;EFF=INTRON(MODIFIER||||821|LOC_Os04g59170|protein_coding|CODING|LOC_Os04g59170.1|5|1) FN428-S.SNP.4:35200829 chr04:035200829 0 W/35200829-35200829 FN428-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os04g59180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3906-S.SNP.4:35206596 chr04:035206596 0 W/35206596-35206596 FN3906-S SNP T -> A AC=2;AN=158;BQB=0.340643;DP=2605;DP4=1295,1243,9,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.70261e-08;MQSB=0.692509;RPB=0.998554;SGB=82.0227;VDB=0.960615;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.4:35207136 chr04:035207136 0 W/35207136-35207136 FN416-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3530-S.SNP.4:35207580 chr04:035207580 0 W/35207580-35207580 FN3530-S SNP G -> T AC=1;AN=188;BQB=0.857319;DP=3645;DP4=1766,1807,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30594e-14;MQSB=0.997633;RPB=0.48253;SGB=117.128;VDB=0.714719;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q263K|340|LOC_Os04g59190|protein_coding|CODING|LOC_Os04g59190.1|2|1) FN4071-S.SNP.4:35213917 chr04:035213917 0 W/35213917-35213917 FN4071-S SNP G -> A AC=1;AN=182;BQB=0.94591;DP=3156;DP4=1588,1487,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.76135e-10;MQSB=0.752221;RPB=0.755934;SGB=42.6494;VDB=0.83091;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.4:35213918 chr04:035213918 0 W/35213918-35213918 FN4071-S SNP C -> T AC=1;AN=182;BQB=0.997162;DP=3155;DP4=1584,1503,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.17075e-09;MQSB=0.745912;RPB=0.956103;SGB=57.644;VDB=0.778595;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.4:35214568 chr04:035214568 0 W/35214568-35214568 FN451-S Single Base Substitution G-T INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2537-S.SNP.4:35215590 chr04:035215590 0 W/35215590-35215590 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.296104;DP=3675;DP4=1567,1960,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.96583e-10;MQSB=0.993935;RPB=0.915146;SGB=77.1196;VDB=0.156408;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V303|352|LOC_Os04g59200|protein_coding|CODING|LOC_Os04g59200.1|2|1) FN1436-S.SNP.4:35220697 chr04:035220697 0 W/35220697-35220697 FN1436-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2353.SNP.4:35222886 chr04:035222886 0 W/35222886-35222886 FN2353 SNP G -> C AC=2;AN=192;BQB=0.241268;DP=3965;DP4=2074,1644,20,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.57189e-14;MQSB=0.992177;RPB=0.122015;SGB=64.8148;VDB=0.28668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A333G|335|LOC_Os04g59210|protein_coding|CODING|LOC_Os04g59210.1|2|1) FN4117-S.SNP.4:35225182 chr04:035225182 0 W/35225182-35225182 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.688744;DP=2742;DP4=1439,1226,10,20;HOB=0.0217365;ICB=0.494567;MQ=28;MQ0F=0.190372;MQB=0.420914;MQSB=0;RPB=0.704815;SGB=26.3016;VDB=0.17244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.4:35225229 chr04:035225229 0 W/35225229-35225229 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.999897;DP=3334;DP4=1731,1510,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.126275;MQB=0.729323;MQSB=0;RPB=0.960361;SGB=53.2642;VDB=0.0519818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.4:35226393 chr04:035226393 0 W/35226393-35226393 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.778786;DP=2616;DP4=1324,1216,15,3;HOB=8.01154e-05;ICB=0.000161245;MQ=31;MQ0F=0.101682;MQB=0.67939;MQSB=4.89439e-09;RPB=0.00502558;SGB=73.2838;VDB=0.0562147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P98S|465|LOC_Os04g59220|protein_coding|CODING|LOC_Os04g59220.1|1|1) FN3698-S.SNP.4:35228613 chr04:035228613 0 W/35228613-35228613 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.898228;DP=2346;DP4=1141,1120,6,1;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0494459;MQB=0.0647574;MQSB=1.96594e-05;RPB=0.120335;SGB=26.3271;VDB=0.0827521;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A224|258|LOC_Os04g59230|protein_coding|CODING|LOC_Os04g59230.1|2|1) FN2668-S.SNP.4:35233363 chr04:035233363 0 W/35233363-35233363 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.888796;DP=4337;DP4=2143,1989,13,15;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00276689;MQB=0.316732;MQSB=0;RPB=0.864682;SGB=90.7419;VDB=0.458418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.4:35237826 chr04:035237826 0 W/35237826-35237826 FN2794-S SNP T -> A AC=1;AN=198;BQB=0.869168;DP=5420;DP4=2475,2726,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.127306;MQB=0.121554;MQSB=4.42113e-06;RPB=0.72904;SGB=118.476;VDB=0.405848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F1058Y|1851|LOC_Os04g59250|protein_coding|CODING|LOC_Os04g59250.1|2|1) FN4175-S.SNP.4:35241871 chr04:035241871 0 W/35241871-35241871 FN4175-S SNP G -> A AC=1;AN=170;BQB=0.828668;DP=1495;DP4=580,858,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0167224;MQB=0.792374;MQSB=0.0187828;RPB=0.882001;SGB=65.6427;VDB=0.0877979;EFF=INTERGENIC(MODIFIER||||||||||1) FN-275.SNP.4:35246995 chr04:035246995 0 W/35246995-35246995 FN-275 Single Base Substitution G-A INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2271-S.SNP.4:35253106 chr04:035253106 0 W/35253106-35253106 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.0207257;DP=4160;DP4=1845,2064,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.18101;MQB=0.572987;MQSB=1.32751e-19;RPB=0.873924;SGB=71.8647;VDB=0.584599;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R823Q|1036|LOC_Os04g59280|protein_coding|CODING|LOC_Os04g59280.1|3|1) FN3757-S.SNP.4:35259387 chr04:035259387 0 W/35259387-35259387 FN3757-S SNP G -> A AC=1;AN=190;BQB=0.804666;DP=3396;DP4=1427,1890,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0111896;MQB=0.147465;MQSB=9.05379e-28;RPB=0.961049;SGB=64.5316;VDB=0.022972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T361M|1871|LOC_Os04g59290|protein_coding|CODING|LOC_Os04g59290.1|2|1) FN2166-S.SNP.4:35264914 chr04:035264914 0 W/35264914-35264914 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.0629017;DP=2697;DP4=1084,1560,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.15358e-05;MQSB=0.828224;RPB=0.828971;SGB=-17.5266;VDB=0.110458;EFF=INTRON(MODIFIER||||257|LOC_Os04g59300|protein_coding|CODING|LOC_Os04g59300.1|3|1) FN3502-S.SNP.4:35269975 chr04:035269975 0 W/35269975-35269975 FN3502-S SNP T -> C AC=1;AN=188;BQB=0.489676;DP=3037;DP4=1768,1161,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.5558e-05;MQSB=0.997347;RPB=0.974081;SGB=-2.17824;VDB=0.93603;EFF=INTRON(MODIFIER||||468|LOC_Os04g59310|protein_coding|CODING|LOC_Os04g59310.1|1|1) FN453-S.SNP.4:35272987 chr04:035272987 0 W/35272987-35272987 FN453-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3389-S.SNP.4:35273511 chr04:035273511 0 W/35273511-35273511 FN3389-S SNP T -> C AC=2;AN=184;BQB=0.979267;DP=2596;DP4=1375,1109,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.0416e-17;MQSB=0.997885;RPB=0.999989;SGB=134.656;VDB=0.76016;EFF=INTRON(MODIFIER||||673|LOC_Os04g59320|protein_coding|CODING|LOC_Os04g59320.1|6|1) W385-6-8-4.SNP.4:35284500 chr04:035284500 0 W/35284500-35284500 W385-6-8-4 Single Base Substitution T-C INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2731-S.SNP.4:35286782 chr04:035286782 0 W/35286782-35286782 FN2731-S SNP G -> T AC=1;AN=200;BQB=0.743423;DP=5051;DP4=2162,2629,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.82291e-16;MQSB=0.989658;RPB=0.985418;SGB=50.3263;VDB=0.601045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.4:35289845 chr04:035289845 0 W/35289845-35289845 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN677-S.SNP.4:35290050 chr04:035290050 0 W/35290050-35290050 FN677-S Single Base Substitution T-G INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN2619-S.SNP.4:35296810 chr04:035296810 0 W/35296810-35296810 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.935816;DP=4245;DP4=1824,2218,12,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.4452e-18;MQSB=0.987049;RPB=0.663597;SGB=104.861;VDB=0.80034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.4:35296811 chr04:035296811 0 W/35296811-35296811 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.970858;DP=4242;DP4=1796,2198,11,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.93094e-20;MQSB=0.978432;RPB=0.749365;SGB=101.266;VDB=0.736685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.4:35299210 chr04:035299210 0 W/35299210-35299210 FN-344 Single Base Substitution C-A INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-53.SNP.4:35299971 chr04:035299971 0 W/35299971-35299971 FN-53 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os04g59380 ZOS4-14 - C2H2 zinc finger protein, expressed SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2397.SNP.4:35316773 chr04:035316773 0 W/35316773-35316773 FN2397 SNP C -> A AC=1;AN=200;BQB=1;DP=4405;DP4=2156,1873,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53814e-09;MQSB=0.923268;RPB=0.999984;SGB=51.0851;VDB=0.442966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.4:35325679 chr04:035325679 0 W/35325679-35325679 FN2467 SNP A -> T AC=1;AN=200;BQB=0.879207;DP=5150;DP4=2716,2149,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.97445e-12;MQSB=0.734164;RPB=0.227051;SGB=45.1159;VDB=0.52259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.4:35325971 chr04:035325971 0 W/35325971-35325971 FN3858-S SNP C -> A AC=1;AN=158;BQB=0.933688;DP=2281;DP4=1005,1170,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.51597e-05;MQSB=0.567041;RPB=0.999444;SGB=25.2211;VDB=0.640324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3801-S.SNP.4:35332249 chr04:035332249 0 W/35332249-35332249 FN3801-S SNP C -> T AC=1;AN=190;BQB=0.999957;DP=2724;DP4=1538,1097,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.86515e-07;MQSB=0.759877;RPB=0.22729;SGB=53.6492;VDB=0.0104702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M254I|529|LOC_Os04g59430|protein_coding|CODING|LOC_Os04g59430.1|1|1) FN2486.SNP.4:35337794 chr04:035337794 0 W/35337794-35337794 FN2486 SNP G -> A AC=1;AN=200;BQB=0.6471;DP=3924;DP4=2045,1623,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44693e-10;MQSB=0.000946906;RPB=0.951587;SGB=81.8956;VDB=0.525933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A195T|254|LOC_Os04g59440|protein_coding|CODING|LOC_Os04g59440.1|1|1) FN4111-S.SNP.4:35346294 chr04:035346294 0 W/35346294-35346294 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.844712;DP=3057;DP4=1375,1569,21,30;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.96706e-29;MQSB=0.909485;RPB=0.598762;SGB=219.053;VDB=0.998923;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.4:35352645 chr04:035352645 0 W/35352645-35352645 FN785-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os04g59460 expressed protein SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2108-S.SNP.4:35353020 chr04:035353020 0 W/35353020-35353020 FN2108-S SNP A -> T AC=1;AN=168;BQB=0.00326949;DP=2962;DP4=1515,1342,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.68378e-07;MQSB=0.607383;RPB=0.98174;SGB=-541.145;VDB=0.00158897;EFF=INTRON(MODIFIER||||1809|LOC_Os04g59460|protein_coding|CODING|LOC_Os04g59460.1|6|1) FN4113-S.SNP.4:35355303 chr04:035355303 0 W/35355303-35355303 FN4113-S SNP T -> C AC=1;AN=182;BQB=0.999783;DP=2344;DP4=783,1432,6,22;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.88967e-15;MQSB=0.101517;RPB=0.42501;SGB=120.796;VDB=0.0915414;EFF=INTRON(MODIFIER||||1809|LOC_Os04g59460|protein_coding|CODING|LOC_Os04g59460.1|1|1) FN4084-S.SNP.4:35355681 chr04:035355681 0 W/35355681-35355681 FN4084-S SNP G -> T AC=2;AN=182;BQB=0.976837;DP=1783;DP4=918,668,9,8;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=5.83805e-08;MQSB=0.294358;RPB=0.983244;SGB=49.6712;VDB=0.754011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.4:35355933 chr04:035355933 0 W/35355933-35355933 FN-240 Single Base Substitution C-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN970-S.SNP.4:35356849 chr04:035356849 0 W/35356849-35356849 FN970-S Single Base Substitution C-A INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. W475-4-2.SNP.4:35358065 chr04:035358065 0 W/35358065-35358065 W475-4-2 Single Base Substitution A-T INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3282-S.SNP.4:35365343 chr04:035365343 0 W/35365343-35365343 FN3282-S SNP A -> G AC=1;AN=184;BQB=0.924753;DP=3074;DP4=1484,1493,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19439e-08;MQSB=0.806725;RPB=0.309377;SGB=53.2642;VDB=0.782113;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.4:35370524 chr04:035370524 0 W/35370524-35370524 W470-2-1 Single Base Substitution T-C INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1179-S.SNP.4:35373371 chr04:035373371 0 W/35373371-35373371 FN1179-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os04g59494 transportin-2, putative, expressed SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2083-S.SNP.4:35376485 chr04:035376485 0 W/35376485-35376485 FN2083-S SNP A -> T AC=2;AN=168;BQB=0.999873;DP=3923;DP4=1945,1912,23,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.70585e-22;MQSB=0.830757;RPB=0.920878;SGB=-157.153;VDB=0.224275;EFF=INTRON(MODIFIER||||1077|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.1|18|1),INTRON(MODIFIER||||1073|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.2|18|1),INTRON(MODIFIER||||891|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.4|18|1) FN2620-S.SNP.4:35381117 chr04:035381117 0 W/35381117-35381117 FN2620-S SNP T -> A AC=2;AN=198;BQB=0.872053;DP=4249;DP4=1771,2206,24,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.86119e-31;MQSB=0.870923;RPB=0.684009;SGB=68.3688;VDB=0.0303949;EFF=UTR_3_PRIME(MODIFIER||475||891|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.4|29|1),INTRON(MODIFIER||||1077|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.1|29|1),INTRON(MODIFIER||||1073|LOC_Os04g59494|protein_coding|CODING|LOC_Os04g59494.2|29|1) FN4036-S.SNP.4:35383195 chr04:035383195 0 W/35383195-35383195 FN4036-S SNP G -> A AC=2;AN=168;BQB=0.998398;DP=2784;DP4=1341,1339,9,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.38798e-10;MQSB=0.991703;RPB=0.523611;SGB=74.3269;VDB=0.658373;EFF=UTR_3_PRIME(MODIFIER||2676||385|LOC_Os04g59510|protein_coding|CODING|LOC_Os04g59510.1|11|1) FN4110-S.SNP.4:35383937 chr04:035383937 0 W/35383937-35383937 FN4110-S SNP T -> A AC=1;AN=182;BQB=0.999949;DP=2571;DP4=1308,1164,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.69602e-07;MQSB=0.986532;RPB=0.733462;SGB=48.6223;VDB=0.110322;EFF=INTRON(MODIFIER||||385|LOC_Os04g59510|protein_coding|CODING|LOC_Os04g59510.1|10|1) FN-281.SNP.4:35384625 chr04:035384625 0 W/35384625-35384625 FN-281 Single Base Substitution C-A UTR_3_PRIME HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2702-S.SNP.4:35387536 chr04:035387536 0 W/35387536-35387536 FN2702-S SNP T -> A AC=1;AN=200;BQB=0.433695;DP=4710;DP4=2437,2017,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.16969e-16;MQSB=0.990472;RPB=0.341934;SGB=87.1368;VDB=0.0287529;EFF=INTRON(MODIFIER||||385|LOC_Os04g59510|protein_coding|CODING|LOC_Os04g59510.1|5|1) FN1667-S.SNP.4:35388011 chr04:035388011 0 W/35388011-35388011 FN1667-S SNP G -> C AC=2;AN=188;BQB=0.613571;DP=3822;DP4=1882,1879,24,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79897e-24;MQSB=0.999604;RPB=0.76516;SGB=-50.609;VDB=0.355514;EFF=INTRON(MODIFIER||||385|LOC_Os04g59510|protein_coding|CODING|LOC_Os04g59510.1|5|1) FN561-S.SNP.4:35396778 chr04:035396778 0 W/35396778-35396778 FN561-S Single Base Substitution C-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN3475-S.SNP.4:35396906 chr04:035396906 0 W/35396906-35396906 FN3475-S SNP A -> T AC=2;AN=184;BQB=0.760741;DP=2560;DP4=1162,1259,33,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.484e-28;MQSB=0.867739;RPB=0.979395;SGB=156.081;VDB=0.179911;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.4:35397486 chr04:035397486 0 W/35397486-35397486 FN1116-S Single Base Substitution G-A INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN-180.SNP.4:35398497 chr04:035398497 0 W/35398497-35398497 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN_N1-151-7.SNP.4:35402310 chr04:035402310 0 W/35402310-35402310 FN_N1-151-7 Single Base Substitution C-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1085-S.SNP.4:35403111 chr04:035403111 0 W/35403111-35403111 FN1085-S Single Base Substitution A-G INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN630-S.SNP.4:35403731 chr04:035403731 0 W/35403731-35403731 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2331.SNP.4:35405916 chr04:035405916 0 W/35405916-35405916 FN2331 SNP G -> A AC=2;AN=192;BQB=0.568152;DP=2261;DP4=1940,147,23,0;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.26825e-11;MQSB=0.982469;RPB=0.813511;SGB=71.8591;VDB=0.596386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.4:35408299 chr04:035408299 0 W/35408299-35408299 FN3825-S SNP T -> A AC=1;AN=190;BQB=0.589375;DP=2803;DP4=1321,1340,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55612e-06;MQSB=0.902915;RPB=0.384869;SGB=53.6492;VDB=0.910654;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.4:35408496 chr04:035408496 0 W/35408496-35408496 FN3691-S SNP G -> T AC=1;AN=190;BQB=0.943452;DP=2623;DP4=1357,1157,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47241e-07;MQSB=0.996131;RPB=0.984154;SGB=49.0954;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.4:35413579 chr04:035413579 0 W/35413579-35413579 FN1356-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os04g59540 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3488-S.SNP.4:35418577 chr04:035418577 0 W/35418577-35418577 FN3488-S SNP G -> A AC=1;AN=184;BQB=0.698295;DP=2410;DP4=1200,1144,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.64628e-07;MQSB=0.991378;RPB=0.87943;SGB=32.2261;VDB=0.96765;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1362|1381|LOC_Os04g59540|protein_coding|CODING|LOC_Os04g59540.1|9|1) FN833-S.SNP.4:35432068 chr04:035432068 0 W/35432068-35432068 FN833-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os04g59580 zinc finger, C3HC4 type domain containing protein, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN2212-S.SNP.4:35433695 chr04:035433695 0 W/35433695-35433695 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.999979;DP=5038;DP4=2704,1991,21,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.29963e-19;MQSB=0.890546;RPB=0.276316;SGB=79.845;VDB=0.618877;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.4:35435028 chr04:035435028 0 W/35435028-35435028 FN733-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN3432-S.SNP.4:35456669 chr04:035456669 0 W/35456669-35456669 FN3432-S SNP C -> G AC=2;AN=184;BQB=0.566743;DP=2384;DP4=1092,1211,17,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.55971e-17;MQSB=0.95896;RPB=0.543479;SGB=120.271;VDB=0.110452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M124I|594|LOC_Os04g59624|protein_coding|CODING|LOC_Os04g59624.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M517I|987|LOC_Os04g59624|protein_coding|CODING|LOC_Os04g59624.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M319I|790|LOC_Os04g59624|protein_coding|CODING|LOC_Os04g59624.3|7|1) FN733-S.SNP.4:35458721 chr04:035458721 0 W/35458721-35458721 FN733-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os04g59624 SNF2 family N-terminal domain containing protein, expressed SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN3437-S.SNP.4:35460043 chr04:035460043 0 W/35460043-35460043 FN3437-S SNP T -> C AC=1;AN=184;BQB=0.661617;DP=2641;DP4=1227,1286,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.45559e-06;MQSB=0.76147;RPB=0.524783;SGB=18.2315;VDB=0.886288;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.4:35460686 chr04:035460686 0 W/35460686-35460686 FN-257 Single Base Substitution A-T INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3959-S.SNP.4:35460686 chr04:035460686 0 W/35460686-35460686 FN3959-S SNP A -> T AC=2;AN=168;BQB=0.56059;DP=2743;DP4=1403,1190,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.1707e-10;MQSB=0.971201;RPB=0.86416;SGB=48.4712;VDB=0.872981;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.4:35460686 chr04:035460686 0 W/35460686-35460686 FN857-S Single Base Substitution A-T INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN4111-S.SNP.4:35460721 chr04:035460721 0 W/35460721-35460721 FN4111-S SNP T -> C AC=2;AN=182;BQB=0.545995;DP=2962;DP4=1650,1157,35,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.81087e-20;MQSB=0.954996;RPB=0.63746;SGB=185.055;VDB=0.882376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.4:35465914 chr04:035465914 0 W/35465914-35465914 FN2345 SNP C -> T AC=1;AN=192;BQB=0.66039;DP=3557;DP4=840,2416,4,17;HOB=5.42535e-05;ICB=0.000109072;MQ=27;MQ0F=0.0466685;MQB=0.878944;MQSB=0;RPB=0.993915;SGB=64.7304;VDB=0.169699 FN1332-S.SNP.4:35472727 chr04:035472727 0 W/35472727-35472727 FN1332-S Single Base Substitution G-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2688-S.SNP.4:35474907 chr04:035474907 0 W/35474907-35474907 FN2688-S SNP C -> A AC=1;AN=200;BQB=0.98549;DP=5164;DP4=2704,2229,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21708e-08;MQSB=0.861516;RPB=0.927288;SGB=63.4749;VDB=0.116195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.4:35482433 chr04:035482433 0 W/35482433-35482433 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.764513;DP=4781;DP4=2287,2284,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08073e-06;MQSB=0.723241;RPB=0.828211;SGB=49.6594;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.4:35488043 chr04:035488043 0 W/35488043-35488043 FN-96 Single Base Substitution T-A INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN-411.SNP.4:35493177 chr04:035493177 0 W/35493177-35493177 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN411-S.SNP.4:35493177 chr04:035493177 0 W/35493177-35493177 FN411-S Single Base Substitution G-A INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN470-S.SNP.4:35494708 chr04:035494708 0 W/35494708-35494708 FN470-S Single Base Substitution T-C INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2373.SNP.4:35495575 chr04:035495575 0 W/35495575-35495575 FN2373 SNP G -> A AC=1;AN=192;BQB=0.858674;DP=4142;DP4=2217,1564,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0311444;MQB=0.512282;MQSB=6.39536e-09;RPB=0.849239;SGB=18.3052;VDB=0.631784;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.4:35496158 chr04:035496158 0 W/35496158-35496158 FN1031-S Single Base Substitution T-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1229-S.SNP.4:35498128 chr04:035498128 0 W/35498128-35498128 FN1229-S Single Base Substitution G-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN4051-S.SNP.5:17201 chr05:000017201 0 W/17201-17201 FN4051-S SNP G -> C AC=1;AN=168;BQB=0.953998;DP=2828;DP4=1179,1563,10,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05865e-12;MQSB=0.906833;RPB=0.732223;SGB=100.912;VDB=0.805062;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L232|957|LOC_Os05g00996|protein_coding|CODING|LOC_Os05g00996.1|4|1) FN2683-S.SNP.5:17328 chr05:000017328 0 W/17328-17328 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.778396;DP=5172;DP4=2368,2494,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97662e-09;MQSB=0.384896;RPB=0.118424;SGB=65.5058;VDB=0.253208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A190V|957|LOC_Os05g00996|protein_coding|CODING|LOC_Os05g00996.1|4|1) FN4258-S.SNP.5:27292 chr05:000027292 0 W/27292-27292 FN4258-S SNP G -> A AC=2;AN=170;BQB=0.777195;DP=2409;DP4=1217,1114,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.28524e-07;MQSB=0.646936;RPB=0.492143;SGB=70.0854;VDB=0.204515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R421C|612|LOC_Os05g01006|protein_coding|CODING|LOC_Os05g01006.1|6|1) FN4132-S.SNP.5:29539 chr05:000029539 0 W/29539-29539 FN4132-S SNP G -> A AC=1;AN=182;BQB=0.994026;DP=3382;DP4=1492,1783,8,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.47626e-11;MQSB=0.996495;RPB=0.724927;SGB=80.1982;VDB=0.876741;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P59L|612|LOC_Os05g01006|protein_coding|CODING|LOC_Os05g01006.1|3|1) FN2434.SNP.5:32718 chr05:000032718 0 W/32718-32718 FN2434 SNP T -> G AC=2;AN=200;BQB=0.544507;DP=3088;DP4=881,1436,7,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000323834;MQB=3.89076e-07;MQSB=0.0416973;RPB=0.507861;SGB=-36.1052;VDB=0.284546;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.5:36688 chr05:000036688 0 W/36688-36688 FN993-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN993-S.SNP.5:36691 chr05:000036691 0 W/36691-36691 FN993-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN496-S.SNP.5:37947 chr05:000037947 0 W/37947-37947 FN496-S Single Base Substitution A-T INTERGENIC HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3564-S.SNP.5:55002 chr05:000055002 0 W/55002-55002 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.538874;DP=2985;DP4=1538,1352,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00234506;MQB=0.00014463;MQSB=0.0772885;RPB=0.850012;SGB=0.908326;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.5:60742 chr05:000060742 0 W/60742-60742 FN3992-S SNP T -> A AC=1;AN=168;BQB=0.999725;DP=2653;DP4=1292,1204,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.56918e-09;MQSB=0.903761;RPB=0.54305;SGB=55.3328;VDB=0.79158;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.5:63209 chr05:000063209 0 W/63209-63209 FN-55 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g01030 phospholipid-transporting ATPase, putative, expressed SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN-55.SNP.5:63211 chr05:000063211 0 W/63211-63211 FN-55 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g01030 phospholipid-transporting ATPase, putative, expressed SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN874-S.SNP.5:67311 chr05:000067311 0 W/67311-67311 FN874-S Single Base Substitution T-A INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3885-S.SNP.5:69525 chr05:000069525 0 W/69525-69525 FN3885-S SNP G -> T AC=1;AN=158;BQB=0.988727;DP=1862;DP4=901,876,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.73716e-07;MQSB=0.0117041;RPB=0.999275;SGB=60.1755;VDB=0.0550356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T30N|138|LOC_Os05g01040|protein_coding|CODING|LOC_Os05g01040.4|1|1) FN1419-S.SNP.5:74879 chr05:000074879 0 W/74879-74879 FN1419-S Single Base Substitution G-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3795-S.SNP.5:79878 chr05:000079878 0 W/79878-79878 FN3795-S SNP T -> C AC=1;AN=190;BQB=0.94629;DP=2924;DP4=1450,1398,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.89196e-10;MQSB=0.951185;RPB=0.83936;SGB=46.7622;VDB=0.741435;EFF=INTRON(MODIFIER||||750|LOC_Os05g01060|protein_coding|CODING|LOC_Os05g01060.1|11|1),INTRON(MODIFIER||||625|LOC_Os05g01060|protein_coding|CODING|LOC_Os05g01060.2|11|1) FN3715-S.SNP.5:89936 chr05:000089936 0 W/89936-89936 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.997748;DP=2649;DP4=1128,1430,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.62952e-09;MQSB=0.925334;RPB=0.771994;SGB=67.3108;VDB=0.251293;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.5:98085 chr05:000098085 0 W/98085-98085 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.981672;DP=3066;DP4=1429,1543,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.00849e-08;MQSB=0.933367;RPB=0.597903;SGB=39.5276;VDB=0.798635;EFF=INTRON(MODIFIER||||137|LOC_Os05g01110|protein_coding|CODING|LOC_Os05g01110.1|1|1) FN3384-S.SNP.5:101221 chr05:000101221 0 W/101221-101221 FN3384-S SNP T -> C AC=2;AN=184;BQB=0.999842;DP=2843;DP4=1348,1386,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.78741e-13;MQSB=0.975898;RPB=0.986495;SGB=74.4875;VDB=0.707995;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.5:102459 chr05:000102459 0 W/102459-102459 FN760-S Single Base Substitution A-G INTRON HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2794-S.SNP.5:112678 chr05:000112678 0 W/112678-112678 FN2794-S SNP A -> G AC=1;AN=198;BQB=0.842871;DP=3975;DP4=1898,1800,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.48448e-10;MQSB=0.99431;RPB=0.7668;SGB=54.5295;VDB=0.928632;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.5:121014 chr05:000121014 0 W/121014-121014 FN533-S Single Base Substitution G-A INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN533-S.SNP.5:121015 chr05:000121015 0 W/121015-121015 FN533-S Single Base Substitution T-A INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN520-S.SNP.5:123675 chr05:000123675 0 W/123675-123675 FN520-S Single Base Substitution G-C INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1180-S.SNP.5:124212 chr05:000124212 0 W/124212-124212 FN1180-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN4151-S.SNP.5:129536 chr05:000129536 0 W/129536-129536 FN4151-S SNP C -> A AC=1;AN=170;BQB=0.871957;DP=2143;DP4=1111,949,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.21989e-07;MQSB=0.898493;RPB=0.1651;SGB=56.7575;VDB=0.056073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.5:134203 chr05:000134203 0 W/134203-134203 FN3039-S SNP A -> T AC=1;AN=184;BQB=0.586669;DP=3056;DP4=1574,1365,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.35069e-12;MQSB=0.973419;RPB=0.999785;SGB=-13.1487;VDB=0.088711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.5:134207 chr05:000134207 0 W/134207-134207 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.997338;DP=3032;DP4=1570,1373,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.29122e-12;MQSB=0.999922;RPB=0.999494;SGB=75.8731;VDB=0.0142455;EFF=INTERGENIC(MODIFIER||||||||||1) FN492-S.SNP.5:135335 chr05:000135335 0 W/135335-135335 FN492-S Single Base Substitution T-C INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3382-S.SNP.5:135360 chr05:000135360 0 W/135360-135360 FN3382-S SNP G -> T AC=2;AN=184;BQB=0.291621;DP=2906;DP4=1471,1308,8,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.34056e-08;MQSB=0.952982;RPB=0.155205;SGB=70.9657;VDB=0.672473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.5:144531 chr05:000144531 0 W/144531-144531 FN3991-S SNP T -> C AC=1;AN=168;BQB=0.990649;DP=2829;DP4=1360,1340,2,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48547e-06;MQSB=0.951163;RPB=0.633627;SGB=31.3172;VDB=0.653752;EFF=INTRON(MODIFIER||||684|LOC_Os05g01190|protein_coding|CODING|LOC_Os05g01190.1|1|1) FN3914-S.SNP.5:154260 chr05:000154260 0 W/154260-154260 FN3914-S SNP G -> T AC=2;AN=158;BQB=0.664107;DP=2538;DP4=1189,1231,11,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.60592e-09;MQSB=0.788326;RPB=0.560135;SGB=77.6532;VDB=0.454285;EFF=INTERGENIC(MODIFIER||||||||||1) FN619-S.SNP.5:154646 chr05:000154646 0 W/154646-154646 FN619-S Single Base Substitution A-T INTERGENIC HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN963-S.SNP.5:163384 chr05:000163384 0 W/163384-163384 FN963-S Single Base Substitution T-A INTRON HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN963-S.SNP.5:163385 chr05:000163385 0 W/163385-163385 FN963-S Single Base Substitution T-A INTRON HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN963-S.SNP.5:163393 chr05:000163393 0 W/163393-163393 FN963-S Single Base Substitution T-A INTRON HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN727-S.SNP.5:175409 chr05:000175409 0 W/175409-175409 FN727-S Single Base Substitution C-A INTRON HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN3807-S.SNP.5:177447 chr05:000177447 0 W/177447-177447 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.868529;DP=2567;DP4=1280,1172,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.71244e-09;MQSB=0.978222;RPB=0.839483;SGB=21.1058;VDB=0.588227;EFF=UTR_3_PRIME(MODIFIER||121||232|LOC_Os05g01250|protein_coding|CODING|LOC_Os05g01250.1|7|1) FN2157-S.SNP.5:184081 chr05:000184081 0 W/184081-184081 FN2157-S SNP G -> A AC=2;AN=168;BQB=0.345172;DP=3173;DP4=1603,1495,25,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.85305e-22;MQSB=0.635588;RPB=0.980042;SGB=117.088;VDB=0.934969;EFF=INTRON(MODIFIER||||197|LOC_Os05g01262|protein_coding|CODING|LOC_Os05g01262.1|1|1),INTRON(MODIFIER||||216|LOC_Os05g01262|protein_coding|CODING|LOC_Os05g01262.2|1|1) FN411-S.SNP.5:185060 chr05:000185060 0 W/185060-185060 FN411-S Single Base Substitution A-G INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN-178.SNP.5:189923 chr05:000189923 0 W/189923-189923 FN-178 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2453.SNP.5:194178 chr05:000194178 0 W/194178-194178 FN2453 SNP T -> C AC=1;AN=200;BQB=0.00425506;DP=5057;DP4=2170,2617,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000197746;MQB=1.50186e-05;MQSB=0.881242;RPB=0.899579;SGB=40.2696;VDB=0.970856;EFF=INTERGENIC(MODIFIER||||||||||1) FN-177.SNP.5:196740 chr05:000196740 0 W/196740-196740 FN-177 Single Base Substitution A-G INTRON HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. W252-6-1.SNP.5:198193 chr05:000198193 0 W/198193-198193 W252-6-1 Single Base Substitution T-C INTRON HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN-148.SNP.5:200525 chr05:000200525 0 W/200525-200525 FN-148 Single Base Substitution A-G INTRON HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-148.SNP.5:200527 chr05:000200527 0 W/200527-200527 FN-148 Single Base Substitution C-T INTRON HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2600-S.SNP.5:204859 chr05:000204859 0 W/204859-204859 FN2600-S SNP T -> G AC=1;AN=198;BQB=0.414946;DP=4168;DP4=2048,1903,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.37961e-15;MQSB=0.999147;RPB=0.912016;SGB=52.7004;VDB=0.61747;EFF=INTRON(MODIFIER||||366|LOC_Os05g01320|protein_coding|CODING|LOC_Os05g01320.1|2|1) FN2600-S.SNP.5:204860 chr05:000204860 0 W/204860-204860 FN2600-S SNP A -> C AC=1;AN=198;BQB=0.333339;DP=4181;DP4=2090,1907,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05503e-13;MQSB=0.997647;RPB=0.999985;SGB=100.095;VDB=0.750214;EFF=INTRON(MODIFIER||||366|LOC_Os05g01320|protein_coding|CODING|LOC_Os05g01320.1|2|1) FN1213-S.SNP.5:213019 chr05:000213019 0 W/213019-213019 FN1213-S Single Base Substitution G-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN3394-S.SNP.5:218454 chr05:000218454 0 W/218454-218454 FN3394-S SNP T -> A AC=1;AN=184;BQB=0.711803;DP=3065;DP4=1615,1332,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.73556e-08;MQSB=0.964937;RPB=0.382626;SGB=5.28054;VDB=0.734056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.5:235655 chr05:000235655 0 W/235655-235655 FN1602-S Single Base Substitution C-T INTRON HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2440.SNP.5:237660 chr05:000237660 0 W/237660-237660 FN2440 SNP G -> T AC=1;AN=200;BQB=0.841272;DP=4079;DP4=2002,1743,11,8;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0509929;MQB=0.52952;MQSB=0.404329;RPB=0.803381;SGB=34.6953;VDB=0.590519;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P1094|1868|LOC_Os05g01400|protein_coding|CODING|LOC_Os05g01400.1|3|1) FN490-S.SNP.5:239217 chr05:000239217 0 W/239217-239217 FN490-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN-278.SNP.5:241623 chr05:000241623 0 W/241623-241623 FN-278 Single Base Substitution G-A STOP_GAINED HET LOC_Os05g01410 retrotransposon protein, putative, unclassified, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN4147-S.SNP.5:244010 chr05:000244010 0 W/244010-244010 FN4147-S SNP G -> A AC=2;AN=170;BQB=0.789028;DP=2059;DP4=1067,930,10,9;HOB=0.0232526;ICB=0.494188;MQ=21;MQ0F=0.28169;MQB=0.0796037;MQSB=5.25487e-43;RPB=0.376049;SGB=78.9707;VDB=0.12623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.5:249674 chr05:000249674 0 W/249674-249674 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.444057;DP=4013;DP4=1919,1825,25,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73386e-23;MQSB=0.952877;RPB=0.755755;SGB=83.8419;VDB=0.89021;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.5:251325 chr05:000251325 0 W/251325-251325 FN2192-S SNP A -> G AC=1;AN=190;BQB=0.469321;DP=5012;DP4=2417,2266,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.89059e-07;MQSB=0.961124;RPB=0.260596;SGB=33.8752;VDB=0.401387;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.5:251370 chr05:000251370 0 W/251370-251370 FN-403 Single Base Substitution A-C INTERGENIC HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN1658-S.SNP.5:259852 chr05:000259852 0 W/259852-259852 FN1658-S SNP T -> C AC=2;AN=188;BQB=0.999709;DP=3938;DP4=1904,1989,16,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.06312e-17;MQSB=0.999429;RPB=0.51717;SGB=-43.3017;VDB=0.247918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.5:263456 chr05:000263456 0 W/263456-263456 FN2268-S SNP G -> T AC=1;AN=190;BQB=0.0520371;DP=4658;DP4=2586,1698,22,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.2704e-16;MQSB=0.752213;RPB=0.691079;SGB=89.4087;VDB=0.973055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.5:274071 chr05:000274071 0 W/274071-274071 FN3534-S SNP C -> T AC=1;AN=188;BQB=0.924326;DP=3030;DP4=1358,1563,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25835e-08;MQSB=0.966822;RPB=0.920556;SGB=53.5223;VDB=0.231693;EFF=INTRON(MODIFIER||||1084|LOC_Os05g01470|protein_coding|CODING|LOC_Os05g01470.2|1|1),INTRON(MODIFIER||||1090|LOC_Os05g01470|protein_coding|CODING|LOC_Os05g01470.1|1|1),INTRON(MODIFIER||||683|LOC_Os05g01470|protein_coding|CODING|LOC_Os05g01470.3|1|1) FN2288.SNP.5:283265 chr05:000283265 0 W/283265-283265 FN2288 SNP A -> C AC=1;AN=192;BQB=0.694195;DP=5373;DP4=2389,2684,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.75528e-14;MQSB=0.958464;RPB=0.379353;SGB=51.9931;VDB=0.164418;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.5:283834 chr05:000283834 0 W/283834-283834 FN426-S Single Base Substitution A-T INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN426-S.SNP.5:283835 chr05:000283835 0 W/283835-283835 FN426-S Single Base Substitution A-T INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN-290.SNP.5:296785 chr05:000296785 0 W/296785-296785 FN-290 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g01500 tubulin-specific chaperone E, putative, expressed SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2667-S.SNP.5:310454 chr05:000310454 0 W/310454-310454 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.417847;DP=4761;DP4=2353,2165,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.4708e-10;MQSB=0.986573;RPB=0.882855;SGB=63.4749;VDB=0.957037;EFF=INTRON(MODIFIER||||638|LOC_Os05g01520|protein_coding|CODING|LOC_Os05g01520.1|1|1) FN3855-S.SNP.5:310722 chr05:000310722 0 W/310722-310722 FN3855-S SNP A -> T AC=1;AN=158;BQB=0.994557;DP=2239;DP4=952,1120,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.87411e-08;MQSB=0.876461;RPB=0.404544;SGB=64.5449;VDB=0.3204;EFF=INTRON(MODIFIER||||638|LOC_Os05g01520|protein_coding|CODING|LOC_Os05g01520.1|1|1) FN1217-S.SNP.5:314898 chr05:000314898 0 W/314898-314898 FN1217-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2684-S.SNP.5:315836 chr05:000315836 0 W/315836-315836 FN2684-S SNP G -> T AC=1;AN=200;BQB=0.994955;DP=4524;DP4=2144,2141,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40345e-10;MQSB=0.99181;RPB=0.828389;SGB=32.0901;VDB=0.898384;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.5:325170 chr05:000325170 0 W/325170-325170 FN1571-S Single Base Substitution T-C INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN4305-S.SNP.5:327990 chr05:000327990 0 W/327990-327990 FN4305-S SNP A -> G AC=2;AN=170;BQB=0.859172;DP=2330;DP4=1164,1065,19,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.1492e-17;MQSB=0.978314;RPB=0.998564;SGB=123.397;VDB=0.513312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L18P|166|LOC_Os05g01560|protein_coding|CODING|LOC_Os05g01560.1|1|1),UTR_5_PRIME(MODIFIER||101||141|LOC_Os05g01560|protein_coding|CODING|LOC_Os05g01560.2|1|1) FN-84.SNP.5:335888 chr05:000335888 0 W/335888-335888 FN-84 Single Base Substitution A-T INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN459-S.SNP.5:336637 chr05:000336637 0 W/336637-336637 FN459-S Single Base Substitution A-G INTERGENIC HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN-137.SNP.5:337222 chr05:000337222 0 W/337222-337222 FN-137 Single Base Substitution G-A INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4075-S.SNP.5:348345 chr05:000348345 0 W/348345-348345 FN4075-S SNP G -> A AC=2;AN=182;BQB=0.854387;DP=2140;DP4=1208,800,8,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=1.32834e-06;MQSB=0.015773;RPB=0.893435;SGB=42.6494;VDB=0.51429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.5:363907 chr05:000363907 0 W/363907-363907 FN3853-S SNP G -> C AC=1;AN=158;BQB=0.977841;DP=2688;DP4=1353,1246,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.48229e-07;MQSB=0.98343;RPB=0.922097;SGB=42.6978;VDB=0.292426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A470P|917|LOC_Os05g01610|protein_coding|CODING|LOC_Os05g01610.1|1|1) FN3919-S.SNP.5:365857 chr05:000365857 0 W/365857-365857 FN3919-S SNP A -> T AC=1;AN=158;BQB=0.833297;DP=1337;DP4=364,883,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.88556e-05;MQSB=0.305516;RPB=0.656289;SGB=27.3346;VDB=0.906888;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K884*|917|LOC_Os05g01610|protein_coding|CODING|LOC_Os05g01610.1|4|1) FN3868-S.SNP.5:370100 chr05:000370100 0 W/370100-370100 FN3868-S SNP G -> T AC=2;AN=158;BQB=0.529323;DP=2107;DP4=1071,962,8,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.32007e-06;MQSB=0.970032;RPB=0.368071;SGB=34.0735;VDB=0.506326;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T38N|462|LOC_Os05g01620|protein_coding|CODING|LOC_Os05g01620.1|2|1) W246-5-1.SNP.5:380313 chr05:000380313 0 W/380313-380313 W246-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3366-S.SNP.5:386815 chr05:000386815 0 W/386815-386815 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.937004;DP=3639;DP4=1450,2094,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0692498;MQB=0.466135;MQSB=0.997863;RPB=0.864183;SGB=38.4058;VDB=0.13069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1145S|1792|LOC_Os05g01650|protein_coding|CODING|LOC_Os05g01650.1|4|1) FN3288-S.SNP.5:410159 chr05:000410159 0 W/410159-410159 FN3288-S SNP A -> T AC=2;AN=184;BQB=0.991108;DP=3371;DP4=1807,1376,22,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.84195e-17;MQSB=0.95458;RPB=0.913721;SGB=71.1891;VDB=0.120024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E231V|330|LOC_Os05g01680|protein_coding|CODING|LOC_Os05g01680.1|1|1) FN3679-S.SNP.5:414944 chr05:000414944 0 W/414944-414944 FN3679-S SNP A -> C AC=1;AN=190;BQB=0.9525;DP=2903;DP4=1337,1442,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08023e-11;MQSB=0.980616;RPB=0.98766;SGB=85.5263;VDB=0.808165;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaC|K576N|1210|LOC_Os05g01690|protein_coding|CODING|LOC_Os05g01690.1|6|1) FN409-S.SNP.5:416525 chr05:000416525 0 W/416525-416525 FN409-S Single Base Substitution T-A INTRON HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3373-S.SNP.5:417247 chr05:000417247 0 W/417247-417247 FN3373-S SNP G -> T AC=1;AN=184;BQB=0.656308;DP=2892;DP4=1550,1249,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.25384e-15;MQSB=0.997297;RPB=0.945367;SGB=98.4821;VDB=0.956315;EFF=INTRON(MODIFIER||||1210|LOC_Os05g01690|protein_coding|CODING|LOC_Os05g01690.1|11|1) FN3373-S.SNP.5:417248 chr05:000417248 0 W/417248-417248 FN3373-S SNP A -> T AC=1;AN=184;BQB=0.827192;DP=2902;DP4=1500,1246,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.78508e-14;MQSB=0.988144;RPB=0.975075;SGB=74.4875;VDB=0.951548;EFF=INTRON(MODIFIER||||1210|LOC_Os05g01690|protein_coding|CODING|LOC_Os05g01690.1|11|1) FN887-S.SNP.5:419412 chr05:000419412 0 W/419412-419412 FN887-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN-85.SNP.5:430479 chr05:000430479 0 W/430479-430479 FN-85 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g01700 ABC transporter, ATP-binding protein, putative, expressed SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-79.SNP.5:437010 chr05:000437010 0 W/437010-437010 FN-79 Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN2774-S.SNP.5:442815 chr05:000442815 0 W/442815-442815 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.899314;DP=4285;DP4=2130,1954,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233372;MQB=5.85559e-08;MQSB=0.963846;RPB=0.4367;SGB=32.9588;VDB=0.0787611;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S81|106|LOC_Os05g01710|protein_coding|CODING|LOC_Os05g01710.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S81|106|LOC_Os05g01710|protein_coding|CODING|LOC_Os05g01710.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S81|106|LOC_Os05g01710|protein_coding|CODING|LOC_Os05g01710.3|4|1) FN4178-S.SNP.5:444567 chr05:000444567 0 W/444567-444567 FN4178-S SNP G -> A AC=1;AN=170;BQB=0.736722;DP=2435;DP4=1101,1248,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.03781e-11;MQSB=0.97878;RPB=0.516157;SGB=62.4192;VDB=0.975803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.5:445769 chr05:000445769 0 W/445769-445769 FN3750-S SNP G -> A AC=2;AN=190;BQB=0.997763;DP=3223;DP4=1437,1568,23,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.48448e-27;MQSB=0.982519;RPB=0.463415;SGB=216.609;VDB=0.828378;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.5:446593 chr05:000446593 0 W/446593-446593 FN229-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1323-S.SNP.5:455362 chr05:000455362 0 W/455362-455362 FN1323-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g01760 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN2535-S.SNP.5:462628 chr05:000462628 0 W/462628-462628 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.0494178;DP=4113;DP4=2047,1790,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.26602e-07;MQSB=0.589667;RPB=0.129158;SGB=4.56404;VDB=0.219507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.5:464747 chr05:000464747 0 W/464747-464747 FN2173-S SNP T -> A AC=1;AN=168;BQB=0.070605;DP=2975;DP4=1301,1651,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08861e-07;MQSB=0.976853;RPB=0.7523;SGB=27.0464;VDB=0.269961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.5:470012 chr05:000470012 0 W/470012-470012 FN2080-S SNP G -> A AC=2;AN=168;BQB=0.467503;DP=3230;DP4=1679,1475,22,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.14481e-20;MQSB=0.928719;RPB=0.640349;SGB=-264.572;VDB=0.0417261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.5:477531 chr05:000477531 0 W/477531-477531 FN1234-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN704-S.SNP.5:477554 chr05:000477554 0 W/477554-477554 FN704-S Single Base Substitution C-T INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1572-S.SNP.5:482251 chr05:000482251 0 W/482251-482251 FN1572-S Single Base Substitution A-T INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN-281.SNP.5:483047 chr05:000483047 0 W/483047-483047 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2690-S.SNP.5:487070 chr05:000487070 0 W/487070-487070 FN2690-S SNP A -> G AC=1;AN=200;BQB=0.69712;DP=4855;DP4=2373,2284,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55705e-08;MQSB=0.617449;RPB=0.964192;SGB=24.2746;VDB=0.570146;EFF=INTRON(MODIFIER||||358|LOC_Os05g01810|protein_coding|CODING|LOC_Os05g01810.1|1|1) FN574-S.SNP.5:487689 chr05:000487689 0 W/487689-487689 FN574-S Single Base Substitution A-G INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN761-S.SNP.5:488198 chr05:000488198 0 W/488198-488198 FN761-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3455-S.SNP.5:491965 chr05:000491965 0 W/491965-491965 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.949167;DP=3030;DP4=1550,1361,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.08311e-07;MQSB=0.977328;RPB=0.478844;SGB=25.1826;VDB=0.145505;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.5:492633 chr05:000492633 0 W/492633-492633 FN870-S Single Base Substitution T-A INTRON HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN4098-S.SNP.5:493718 chr05:000493718 0 W/493718-493718 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.999509;DP=3044;DP4=1454,1509,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.33885e-09;MQSB=0.997284;RPB=0.617432;SGB=66.6657;VDB=0.298842;EFF=INTRON(MODIFIER||||137|LOC_Os05g01820|protein_coding|CODING|LOC_Os05g01820.1|2|1) FN-366.SNP.5:495731 chr05:000495731 0 W/495731-495731 FN-366 Single Base Substitution T-A INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3955-S.SNP.5:501023 chr05:000501023 0 W/501023-501023 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.847607;DP=4406;DP4=2025,2244,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00363141;MQB=3.58611e-10;MQSB=0.00103891;RPB=0.892493;SGB=58.7637;VDB=0.386753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.5:501026 chr05:000501026 0 W/501026-501026 FN3955-S SNP C -> A AC=1;AN=168;BQB=0.904796;DP=4418;DP4=2024,2254,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00407424;MQB=2.61456e-10;MQSB=0.0037832;RPB=0.812842;SGB=65.6253;VDB=0.765979;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.5:501105 chr05:000501105 0 W/501105-501105 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1504-S.SNP.5:501319 chr05:000501319 0 W/501319-501319 FN1504-S Single Base Substitution T-A INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2207-S.SNP.5:510701 chr05:000510701 0 W/510701-510701 FN2207-S SNP T -> C AC=2;AN=190;BQB=0.576771;DP=4923;DP4=1994,2298,25,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.56218e-16;MQSB=0.996248;RPB=0.967018;SGB=-3.2522;VDB=0.0161542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.5:524062 chr05:000524062 0 W/524062-524062 FN2652-S SNP G -> C AC=1;AN=200;BQB=0.829613;DP=5059;DP4=2496,2318,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96787e-15;MQSB=0.989448;RPB=0.990582;SGB=104.921;VDB=0.468344;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.5:528390 chr05:000528390 0 W/528390-528390 FN4275-S SNP T -> C AC=2;AN=170;BQB=0.638824;DP=2402;DP4=1224,1095,15,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.26811e-10;MQSB=0.935533;RPB=0.982631;SGB=36.9825;VDB=0.276897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.5:530908 chr05:000530908 0 W/530908-530908 FN2765-S SNP T -> A AC=1;AN=198;BQB=0.592776;DP=3263;DP4=1573,1505,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.32736e-07;MQSB=2.52565e-06;RPB=0.71358;SGB=43.7442;VDB=0.570146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.5:548134 chr05:000548134 0 W/548134-548134 FN2105-S SNP G -> T AC=2;AN=168;BQB=0.827499;DP=3342;DP4=1343,1933,14,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.59588e-19;MQSB=0.924786;RPB=0.59192;SGB=37.0995;VDB=0.383829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.5:549263 chr05:000549263 0 W/549263-549263 FN1060-S Single Base Substitution G-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1043-S.SNP.5:550717 chr05:000550717 0 W/550717-550717 FN1043-S Single Base Substitution G-A INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN229-S.SNP.5:560309 chr05:000560309 0 W/560309-560309 FN229-S Single Base Substitution G-T INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2375.SNP.5:563322 chr05:000563322 0 W/563322-563322 FN2375 SNP T -> A AC=1;AN=192;BQB=0.874253;DP=5170;DP4=2730,2071,4,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.73152e-05;MQSB=0.000736067;RPB=0.0478942;SGB=29.087;VDB=0.00556282;EFF=INTRON(MODIFIER||||591|LOC_Os05g01990|protein_coding|CODING|LOC_Os05g01990.1|1|1),INTRON(MODIFIER||||434|LOC_Os05g01990|protein_coding|CODING|LOC_Os05g01990.2|1|1) FN2781-S.SNP.5:567094 chr05:000567094 0 W/567094-567094 FN2781-S SNP T -> A AC=1;AN=198;BQB=0.276577;DP=4210;DP4=1874,2092,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00023753;MQB=3.54988e-10;MQSB=0.949267;RPB=0.543759;SGB=63.3342;VDB=0.306305;EFF=INTRON(MODIFIER||||127|LOC_Os05g01994|protein_coding|CODING|LOC_Os05g01994.1|2|1) FN2781-S.SNP.5:567095 chr05:000567095 0 W/567095-567095 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.934465;DP=4215;DP4=1891,2079,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000237248;MQB=1.01853e-10;MQSB=0.953009;RPB=0.792276;SGB=9.3494;VDB=0.296913;EFF=INTRON(MODIFIER||||127|LOC_Os05g01994|protein_coding|CODING|LOC_Os05g01994.1|2|1) FN903-S.SNP.5:568387 chr05:000568387 0 W/568387-568387 FN903-S Single Base Substitution C-A INTERGENIC HOMO SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN2674-S.SNP.5:569722 chr05:000569722 0 W/569722-569722 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.997809;DP=4977;DP4=2443,2234,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0528e-14;MQSB=0.954085;RPB=0.584083;SGB=118.737;VDB=0.656307;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.5:578279 chr05:000578279 0 W/578279-578279 FN566-S Single Base Substitution G-C INTRON HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3982-S.SNP.5:578376 chr05:000578376 0 W/578376-578376 FN3982-S SNP C -> A AC=1;AN=168;BQB=0.903705;DP=2510;DP4=1124,1274,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62775e-08;MQSB=0.985798;RPB=0.853428;SGB=41.6096;VDB=0.853352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A192S|395|LOC_Os05g02020|protein_coding|CODING|LOC_Os05g02020.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A190S|393|LOC_Os05g02020|protein_coding|CODING|LOC_Os05g02020.2|4|1) FN449-S.SNP.5:581506 chr05:000581506 0 W/581506-581506 FN449-S Single Base Substitution C-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN449-S.SNP.5:581517 chr05:000581517 0 W/581517-581517 FN449-S Single Base Substitution T-G INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1466-S.SNP.5:596373 chr05:000596373 0 W/596373-596373 FN1466-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os05g02040 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1475-S.SNP.5:604451 chr05:000604451 0 W/604451-604451 FN1475-S Single Base Substitution G-T INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN-375.SNP.5:605537 chr05:000605537 0 W/605537-605537 FN-375 Single Base Substitution T-C INTERGENIC HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-204.SNP.5:609600 chr05:000609600 0 W/609600-609600 FN-204 Single Base Substitution A-G INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN2352.SNP.5:619011 chr05:000619011 0 W/619011-619011 FN2352 SNP C -> G AC=2;AN=192;BQB=0.259403;DP=4749;DP4=2285,2191,20,28;HOB=0.0206163;ICB=0.494846;MQ=24;MQ0F=0.198358;MQB=0.906575;MQSB=1.30447e-41;RPB=0.400676;SGB=108.409;VDB=0.588222;EFF=INTRON(MODIFIER||||943|LOC_Os05g02080|protein_coding|CODING|LOC_Os05g02080.1|20|1) FN2286.SNP.5:620163 chr05:000620163 0 W/620163-620163 FN2286 SNP A -> G AC=1;AN=192;BQB=0.719217;DP=5015;DP4=2406,2369,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=19;MQ0F=0.217946;MQB=0.97479;MQSB=0.566239;RPB=0.175218;SGB=18.3052;VDB=0.0071544;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.5:625228 chr05:000625228 0 W/625228-625228 FN565-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN3863-S.SNP.5:627896 chr05:000627896 0 W/627896-627896 FN3863-S SNP A -> T AC=2;AN=158;BQB=0.901399;DP=1423;DP4=719,579,2,12;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0.263528;MQB=0.474003;MQSB=0.0678758;RPB=0.438146;SGB=37.4429;VDB=0.391864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.5:631871 chr05:000631871 0 W/631871-631871 FN3439-S SNP G -> A AC=2;AN=184;BQB=0.903663;DP=2827;DP4=1332,1380,8,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.03032e-10;MQSB=0.999159;RPB=0.898337;SGB=84.9167;VDB=0.156715;EFF=INTRON(MODIFIER||||593|LOC_Os05g02110|protein_coding|CODING|LOC_Os05g02110.1|3|1) FN1618-S.SNP.5:634074 chr05:000634074 0 W/634074-634074 FN1618-S Single Base Substitution G-A INTRON HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3548-S.SNP.5:640020 chr05:000640020 0 W/640020-640020 FN3548-S SNP T -> C AC=1;AN=188;BQB=0.950201;DP=2742;DP4=1302,1365,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5204e-07;MQSB=0.918638;RPB=0.993334;SGB=28.8977;VDB=0.252521;EFF=UTR_3_PRIME(MODIFIER||862||450|LOC_Os05g02130|protein_coding|CODING|LOC_Os05g02130.1|8|1) FN2768-S.SNP.5:654899 chr05:000654899 0 W/654899-654899 FN2768-S SNP A -> T AC=1;AN=198;BQB=0.894371;DP=4016;DP4=1813,2044,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.19919e-13;MQSB=0.638891;RPB=0.670259;SGB=68.91;VDB=0.789362;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.5:669213 chr05:000669213 0 W/669213-669213 FN898-S Single Base Substitution A-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1196-S.SNP.5:670478 chr05:000670478 0 W/670478-670478 FN1196-S Single Base Substitution T-C INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1251-S.SNP.5:681177 chr05:000681177 0 W/681177-681177 FN1251-S Single Base Substitution T-A INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN1484-S.SNP.5:681710 chr05:000681710 0 W/681710-681710 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN469-S.SNP.5:681710 chr05:000681710 0 W/681710-681710 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN4106-S.SNP.5:683939 chr05:000683939 0 W/683939-683939 FN4106-S SNP G -> A AC=1;AN=182;BQB=0.868654;DP=3077;DP4=1429,1538,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.71559e-07;MQSB=0.978541;RPB=0.793617;SGB=39.6007;VDB=0.762398;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.5:683940 chr05:000683940 0 W/683940-683940 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.877478;DP=3056;DP4=1417,1485,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12711e-07;MQSB=0.978575;RPB=0.399133;SGB=28.6061;VDB=0.766851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.5:684703 chr05:000684703 0 W/684703-684703 FN2340 SNP G -> A AC=2;AN=192;BQB=0.75845;DP=5595;DP4=2492,2706,32,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.28459e-33;MQSB=0.997471;RPB=0.745819;SGB=77.7505;VDB=0.267553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.5:687188 chr05:000687188 0 W/687188-687188 FN2547-S SNP T -> A AC=1;AN=198;BQB=0.944856;DP=4335;DP4=2024,2038,3,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.22843e-08;MQSB=0.922109;RPB=0.687108;SGB=40.149;VDB=0.822738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1555-S.SNP.5:694593 chr05:000694593 0 W/694593-694593 FN1555-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g02210 pentatricopeptide, putative, expressed SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1555-S.SNP.5:694594 chr05:000694594 0 W/694594-694594 FN1555-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os05g02210 pentatricopeptide, putative, expressed SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN2229-S.SNP.5:709823 chr05:000709823 0 W/709823-709823 FN2229-S SNP G -> T AC=2;AN=190;BQB=0.975891;DP=4935;DP4=2218,2320,21,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.99717e-29;MQSB=0.99462;RPB=0.367655;SGB=5.60984;VDB=0.0455398;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.5:714182 chr05:000714182 0 W/714182-714182 FN276-S Single Base Substitution G-A INTRON HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN472-S.SNP.5:714307 chr05:000714307 0 W/714307-714307 FN472-S Single Base Substitution A-G INTRON HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2470.SNP.5:718216 chr05:000718216 0 W/718216-718216 FN2470 SNP T -> G AC=1;AN=200;BQB=0.913953;DP=4475;DP4=1931,2244,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.433e-15;MQSB=0.770823;RPB=0.988167;SGB=87.1368;VDB=0.416715;EFF=UTR_3_PRIME(MODIFIER||160||141|LOC_Os05g02250|protein_coding|CODING|LOC_Os05g02250.1|1|1) FN2304.SNP.5:720645 chr05:000720645 0 W/720645-720645 FN2304 SNP C -> T AC=1;AN=192;BQB=0.638299;DP=5089;DP4=2256,2483,29,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000196502;MQB=3.08583e-25;MQSB=0.917349;RPB=0.722872;SGB=-98.9565;VDB=0.779919;EFF=INTRON(MODIFIER||||264|LOC_Os05g02260|protein_coding|CODING|LOC_Os05g02260.1|1|1),INTRON(MODIFIER||||260|LOC_Os05g02260|protein_coding|CODING|LOC_Os05g02260.2|1|1),INTRON(MODIFIER||||258|LOC_Os05g02260|protein_coding|CODING|LOC_Os05g02260.3|1|1),INTRON(MODIFIER||||205|LOC_Os05g02260|protein_coding|CODING|LOC_Os05g02260.4|1|1) FN2083-S.SNP.5:726889 chr05:000726889 0 W/726889-726889 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.986381;DP=2239;DP4=1064,1089,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00491291;MQB=0.425692;MQSB=0.981968;RPB=0.919736;SGB=34.4498;VDB=0.529034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.5:727754 chr05:000727754 0 W/727754-727754 FN3580-S SNP C -> T AC=2;AN=188;BQB=0.95137;DP=2973;DP4=1422,1408,13,16;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00336361;MQB=1.42264e-14;MQSB=0.174068;RPB=0.904414;SGB=59.139;VDB=0.296651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.5:728583 chr05:000728583 0 W/728583-728583 FN2344 SNP G -> A AC=1;AN=192;BQB=0.990188;DP=4710;DP4=2282,2177,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00764331;MQB=0.0330399;MQSB=0.221139;RPB=0.998698;SGB=113.111;VDB=0.351608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C201Y|450|LOC_Os05g02270|protein_coding|CODING|LOC_Os05g02270.1|2|1) FN3799-S.SNP.5:735749 chr05:000735749 0 W/735749-735749 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.708056;DP=2222;DP4=954,1192,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000450045;MQB=4.2277e-06;MQSB=0.270197;RPB=0.916923;SGB=25.439;VDB=0.814818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.5:735750 chr05:000735750 0 W/735750-735750 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.943535;DP=2205;DP4=937,1162,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000453515;MQB=6.14543e-06;MQSB=0.190879;RPB=0.936481;SGB=25.439;VDB=0.798199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.5:743742 chr05:000743742 0 W/743742-743742 FN2765-S SNP A -> T AC=2;AN=198;BQB=0.870475;DP=4368;DP4=2303,1745,19,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.69474e-17;MQSB=0.782664;RPB=0.549003;SGB=115.647;VDB=0.76305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.5:743744 chr05:000743744 0 W/743744-743744 FN2395 SNP T -> C AC=1;AN=200;BQB=0.861443;DP=4883;DP4=2613,1963,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.37957e-18;MQSB=0.80177;RPB=0.84167;SGB=132.552;VDB=0.492177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.5:745580 chr05:000745580 0 W/745580-745580 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.41785;DP=2749;DP4=1574,1064,9,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29732e-05;MQSB=0.980967;RPB=0.420829;SGB=39.699;VDB=0.99535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.5:748279 chr05:000748279 0 W/748279-748279 FN3651-S SNP C -> T AC=1;AN=190;BQB=0.943609;DP=3072;DP4=1411,1554,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000651042;MQB=6.86208e-10;MQSB=0.988212;RPB=0.871681;SGB=62.7569;VDB=0.842681;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q66*|639|LOC_Os05g02320|protein_coding|CODING|LOC_Os05g02320.1|1|1);LOF=(LOC_Os05g02320|LOC_Os05g02320|1|1.00);NMD=(LOC_Os05g02320|LOC_Os05g02320|1|1.00) FN2650-S.SNP.5:751149 chr05:000751149 0 W/751149-751149 FN2650-S SNP G -> C AC=1;AN=200;BQB=0.681719;DP=4896;DP4=2313,2327,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0067402;MQB=4.37763e-15;MQSB=0.860728;RPB=0.819776;SGB=109.527;VDB=0.758122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T336R|423|LOC_Os05g02330|protein_coding|CODING|LOC_Os05g02330.1|1|1) FN373-S.SNP.5:756995 chr05:000756995 0 W/756995-756995 FN373-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1134-S.SNP.5:758149 chr05:000758149 0 W/758149-758149 FN1134-S Single Base Substitution A-T INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN704-S.SNP.5:767276 chr05:000767276 0 W/767276-767276 FN704-S Single Base Substitution A-T INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3443-S.SNP.5:771675 chr05:000771675 0 W/771675-771675 FN3443-S SNP T -> C AC=1;AN=184;BQB=0.904587;DP=3289;DP4=1355,1787,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04359e-07;MQSB=0.444133;RPB=0.987269;SGB=48.7425;VDB=0.207866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.5:779931 chr05:000779931 0 W/779931-779931 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.998514;DP=2921;DP4=1605,1185,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.2021e-10;MQSB=0.729752;RPB=0.870801;SGB=53.7007;VDB=0.972245;EFF=INTERGENIC(MODIFIER||||||||||1) FN_846-8-1.SNP.5:782207 chr05:000782207 0 W/782207-782207 FN_846-8-1 Single Base Substitution A-G HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2702-S.SNP.5:805143 chr05:000805143 0 W/805143-805143 FN2702-S SNP T -> C AC=1;AN=200;BQB=0.401882;DP=4950;DP4=2383,2286,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58678e-11;MQSB=0.998927;RPB=0.971812;SGB=39.9056;VDB=0.463421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.5:808695 chr05:000808695 0 W/808695-808695 FN2558-S SNP C -> A AC=1;AN=198;BQB=0.963027;DP=4211;DP4=1947,2045,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.52906e-08;MQSB=0.99749;RPB=0.655055;SGB=26.7492;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.5:812982 chr05:000812982 0 W/812982-812982 FN3844-S SNP T -> C AC=1;AN=190;BQB=0.967589;DP=2827;DP4=1394,1342,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03403e-06;MQSB=0.908824;RPB=0.19243;SGB=15.9981;VDB=0.211747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.5:815768 chr05:000815768 0 W/815768-815768 FN1119-S Single Base Substitution A-C INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1119-S.SNP.5:815771 chr05:000815771 0 W/815771-815771 FN1119-S Single Base Substitution G-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1423-S.SNP.5:815971 chr05:000815971 0 W/815971-815971 FN1423-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.5:815971 chr05:000815971 0 W/815971-815971 FN1433-S Single Base Substitution T-C INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1423-S.SNP.5:815979 chr05:000815979 0 W/815979-815979 FN1423-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.5:815979 chr05:000815979 0 W/815979-815979 FN1433-S Single Base Substitution T-C INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN4065-S.SNP.5:816222 chr05:000816222 0 W/816222-816222 FN4065-S SNP A -> T AC=1;AN=168;BQB=0.3058;DP=2840;DP4=1415,1331,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35261e-07;MQSB=0.887585;RPB=0.998702;SGB=29.4772;VDB=0.488578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.5:816404 chr05:000816404 0 W/816404-816404 FN2213-S SNP T -> C AC=1;AN=190;BQB=0.978775;DP=4701;DP4=2378,1888,23,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.73434e-17;MQSB=0.222435;RPB=0.368395;SGB=74.7373;VDB=0.637463;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN-99 Single Base Substitution A-T INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1152-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN1152-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1419-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN1419-S Single Base Substitution A-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1456-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN1456-S Single Base Substitution A-T INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1681-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN1681-S SNP A -> T AC=2;AN=188;BQB=0.58739;DP=3674;DP4=2150,1478,17,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.03272e-12;MQSB=0.988214;RPB=0.502386;SGB=-7.93693;VDB=0.97749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN2175-S SNP A -> T AC=1;AN=168;BQB=0.526173;DP=3550;DP4=2153,1367,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.71327e-05;MQSB=0.950343;RPB=0.957607;SGB=2.75988;VDB=0.569208;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN2226-S SNP A -> T AC=1;AN=190;BQB=0.79447;DP=5085;DP4=2576,2182,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39363e-06;MQSB=0.852503;RPB=0.7956;SGB=49.0954;VDB=0.94034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN2536-S SNP A -> T AC=2;AN=198;BQB=0.90422;DP=4369;DP4=2209,1919,9,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.21983e-11;MQSB=0.993244;RPB=0.72791;SGB=12.5396;VDB=0.620372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN3388-S SNP A -> T AC=2;AN=184;BQB=0.948246;DP=2506;DP4=1405,957,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.70311e-18;MQSB=0.999709;RPB=0.161522;SGB=61.1019;VDB=0.146302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN3846-S SNP A -> T AC=2;AN=190;BQB=0.832371;DP=2261;DP4=1280,846,13,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14636e-10;MQSB=0.945803;RPB=0.910732;SGB=71.6393;VDB=0.692142;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.5:818597 chr05:000818597 0 W/818597-818597 FN440-S Single Base Substitution A-T INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN807-S.SNP.5:820235 chr05:000820235 0 W/820235-820235 FN807-S Single Base Substitution T-A INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2794-S.SNP.5:821863 chr05:000821863 0 W/821863-821863 FN2794-S SNP T -> A AC=1;AN=198;BQB=0.997696;DP=4506;DP4=2286,1882,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.05648e-10;MQSB=0.882694;RPB=0.996367;SGB=31.9395;VDB=0.4108;EFF=UTR_5_PRIME(MODIFIER||949||110|LOC_Os05g02435|protein_coding|CODING|LOC_Os05g02435.1|1|1) FN1334-S.SNP.5:831402 chr05:000831402 0 W/831402-831402 FN1334-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1334-S.SNP.5:831403 chr05:000831403 0 W/831403-831403 FN1334-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN447-S.SNP.5:831594 chr05:000831594 0 W/831594-831594 FN447-S Single Base Substitution A-T STOP_GAINED HET LOC_Os05g02440 expressed protein SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN664-S.SNP.5:837510 chr05:000837510 0 W/837510-837510 FN664-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g02450 expressed protein SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN3793-S.SNP.5:841699 chr05:000841699 0 W/841699-841699 FN3793-S SNP G -> A AC=1;AN=190;BQB=0.962759;DP=3091;DP4=1874,1044,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1591e-08;MQSB=0.55641;RPB=0.647251;SGB=46.7622;VDB=0.345917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.5:843459 chr05:000843459 0 W/843459-843459 FN2265-S SNP G -> T AC=1;AN=190;BQB=0.0458885;DP=5292;DP4=2544,2215,21,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000188964;MQB=4.41559e-20;MQSB=0.999577;RPB=0.125631;SGB=-0.482811;VDB=0.788097;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.5:843639 chr05:000843639 0 W/843639-843639 FN770-S Single Base Substitution C-T INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1481-S.SNP.5:848215 chr05:000848215 0 W/848215-848215 FN1481-S Single Base Substitution T-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN729-S.SNP.5:849990 chr05:000849990 0 W/849990-849990 FN729-S Single Base Substitution A-G INTRON HOMO SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN266-S.SNP.5:851182 chr05:000851182 0 W/851182-851182 FN266-S Single Base Substitution C-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3432-S.SNP.5:851362 chr05:000851362 0 W/851362-851362 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.939437;DP=2744;DP4=1217,1177,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.00565e-08;MQSB=0.984742;RPB=0.99746;SGB=6.80232;VDB=0.347442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.5:852653 chr05:000852653 0 W/852653-852653 FN-353 Single Base Substitution C-A INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3859-S.SNP.5:858141 chr05:000858141 0 W/858141-858141 FN3859-S SNP G -> T AC=1;AN=158;BQB=0.892247;DP=2456;DP4=1195,1144,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.35858e-11;MQSB=0.953304;RPB=0.666696;SGB=68.9144;VDB=0.821711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.5:873162 chr05:000873162 0 W/873162-873162 FN3599-S SNP A -> G AC=1;AN=188;BQB=0.878675;DP=3360;DP4=1751,1497,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.12387e-08;MQSB=0.871744;RPB=0.808896;SGB=5.5382;VDB=0.527087;EFF=UTR_3_PRIME(MODIFIER||146||332|LOC_Os05g02520|protein_coding|CODING|LOC_Os05g02520.2|3|1),UTR_3_PRIME(MODIFIER||146||268|LOC_Os05g02520|protein_coding|CODING|LOC_Os05g02520.3|3|1),UTR_3_PRIME(MODIFIER||196||359|LOC_Os05g02520|protein_coding|CODING|LOC_Os05g02520.1|3|1) FN1334-S.SNP.5:874112 chr05:000874112 0 W/874112-874112 FN1334-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g02520 cupin domain containing protein, expressed SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN4312-S.SNP.5:880512 chr05:000880512 0 W/880512-880512 FN4312-S SNP A -> G AC=1;AN=170;BQB=0.997611;DP=2549;DP4=1218,1200,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.38139e-07;MQSB=0.989308;RPB=0.919471;SGB=27.9928;VDB=0.417004;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I34|297|LOC_Os05g02530|protein_coding|CODING|LOC_Os05g02530.1|1|1) FN457-S.SNP.5:886883 chr05:000886883 0 W/886883-886883 FN457-S Single Base Substitution T-C INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3362-S.SNP.5:893940 chr05:000893940 0 W/893940-893940 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.92948;DP=2577;DP4=1233,1230,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000293698;MQSB=0.575679;RPB=0.828714;SGB=30.6558;VDB=0.387294;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.5:908940 chr05:000908940 0 W/908940-908940 FN4241-S SNP C -> A AC=2;AN=170;BQB=0.862226;DP=2421;DP4=1235,1068,23,14;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.96221e-12;MQSB=0.258418;RPB=0.875111;SGB=117.502;VDB=0.288924;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.5:912012 chr05:000912012 0 W/912012-912012 FN-370 Single Base Substitution C-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.5:912019 chr05:000912019 0 W/912019-912019 FN-370 Single Base Substitution T-A INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN467-S.SNP.5:923693 chr05:000923693 0 W/923693-923693 FN467-S Single Base Substitution G-A INTRON HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2428.SNP.5:926833 chr05:000926833 0 W/926833-926833 FN2428 SNP G -> A AC=1;AN=200;BQB=0.183391;DP=4486;DP4=2505,1743,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222916;MQB=1.13082e-15;MQSB=0.878016;RPB=0.905786;SGB=79.9264;VDB=0.862424;EFF=INTRON(MODIFIER||||826|LOC_Os05g02650|protein_coding|CODING|LOC_Os05g02650.1|1|1) FN1572-S.SNP.5:929372 chr05:000929372 0 W/929372-929372 FN1572-S Single Base Substitution T-G INTRON Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1553-S.SNP.5:940477 chr05:000940477 0 W/940477-940477 FN1553-S Single Base Substitution C-A START_GAINED HET LOC_Os05g02670 kinesin motor domain containing protein, putative, expressed SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN706-S.SNP.5:944039 chr05:000944039 0 W/944039-944039 FN706-S Single Base Substitution G-T INTRON HOMO SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN791-S.SNP.5:951238 chr05:000951238 0 W/951238-951238 FN791-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g02680 nuclear factor related to kappa-B-binding protein, related, putative, expressed SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN791-S.SNP.5:951241 chr05:000951241 0 W/951241-951241 FN791-S Single Base Substitution G-T STOP_GAINED HET LOC_Os05g02680 nuclear factor related to kappa-B-binding protein, related, putative, expressed SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2417.SNP.5:955687 chr05:000955687 0 W/955687-955687 FN2417 SNP A -> T AC=1;AN=200;BQB=0.0347661;DP=3880;DP4=1631,1655,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43222e-10;MQSB=0.925039;RPB=0.972717;SGB=-156.875;VDB=0.840565;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.5:955691 chr05:000955691 0 W/955691-955691 FN2417 SNP A -> T AC=1;AN=200;BQB=0.966864;DP=3856;DP4=1779,1707,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78636e-12;MQSB=0.927212;RPB=0.945337;SGB=11.0951;VDB=0.831798;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.5:962028 chr05:000962028 0 W/962028-962028 FN1025-S Single Base Substitution T-A INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN498-S.SNP.5:969156 chr05:000969156 0 W/969156-969156 FN498-S Single Base Substitution T-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN416-S.SNP.5:986215 chr05:000986215 0 W/986215-986215 FN416-S Single Base Substitution G-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3933-S.SNP.5:987619 chr05:000987619 0 W/987619-987619 FN3933-S SNP G -> T AC=1;AN=158;BQB=0.571846;DP=2452;DP4=1199,1136,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.58284e-07;MQSB=0.988012;RPB=0.318791;SGB=60.1755;VDB=0.897649;EFF=INTRON(MODIFIER||||55|LOC_Os05g02740|protein_coding|CODING|LOC_Os05g02740.1|1|1) FN-30.SNP.5:989974 chr05:000989974 0 W/989974-989974 FN-30 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g02750 ABC transporter, membrane-spanning/permease subunit, putative, expressed SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN670-S.SNP.5:991892 chr05:000991892 0 W/991892-991892 FN670-S Single Base Substitution C-T INTRON HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1198-S.SNP.5:994371 chr05:000994371 0 W/994371-994371 FN1198-S Single Base Substitution G-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN2629-S.SNP.5:996350 chr05:000996350 0 W/996350-996350 FN2629-S SNP T -> G AC=2;AN=200;BQB=0.613487;DP=4788;DP4=2333,2202,18,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.93609e-18;MQSB=0.999204;RPB=0.210848;SGB=71.1676;VDB=0.33477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.5:997440 chr05:000997440 0 W/997440-997440 FN2242-S SNP T -> A AC=1;AN=190;BQB=0.966912;DP=5090;DP4=2478,2355,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18054e-14;MQSB=0.942521;RPB=0.999018;SGB=78.7471;VDB=0.111442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.5:1013002 chr05:001013002 0 W/1013002-1013002 FN1536-S Single Base Substitution G-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-274.SNP.5:1018805 chr05:001018805 0 W/1018805-1018805 FN-274 Single Base Substitution G-C INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3980-S.SNP.5:1021248 chr05:001021248 0 W/1021248-1021248 FN3980-S SNP T -> G AC=1;AN=168;BQB=0.967256;DP=2643;DP4=1257,1281,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.01566e-06;MQSB=0.938065;RPB=0.695305;SGB=43.3113;VDB=0.481974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.5:1022916 chr05:001022916 0 W/1022916-1022916 FN2432 SNP A -> G AC=2;AN=200;BQB=0.995849;DP=4949;DP4=2250,2417,20,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000606183;MQB=3.49941e-18;MQSB=4.46056e-17;RPB=0.724251;SGB=148.425;VDB=0.27096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.5:1029435 chr05:001029435 0 W/1029435-1029435 FN2496 SNP A -> G AC=2;AN=200;BQB=0.966998;DP=4537;DP4=1922,2091,16,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46609e-19;MQSB=0.848434;RPB=0.439616;SGB=36.7778;VDB=0.587161;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.5:1030175 chr05:001030175 0 W/1030175-1030175 FN451-S Single Base Substitution A-G INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2411.SNP.5:1030528 chr05:001030528 0 W/1030528-1030528 FN2411 SNP C -> T AC=1;AN=200;BQB=0.739343;DP=3972;DP4=1850,1908,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02474e-07;MQSB=6.3793e-05;RPB=0.999547;SGB=54.2646;VDB=0.243225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.5:1032944 chr05:001032944 0 W/1032944-1032944 FN3852-S SNP A -> C AC=2;AN=158;BQB=0.928931;DP=2301;DP4=1116,1074,6,11;HOB=0.024996;ICB=0.493752;MQ=44;MQ0F=0.0121686;MQB=0.000556206;MQSB=2.05403e-11;RPB=0.74974;SGB=47.5512;VDB=0.539555;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcC|S502|667|LOC_Os05g02850|protein_coding|CODING|LOC_Os05g02850.1|6|1) FN2588-S.SNP.5:1034393 chr05:001034393 0 W/1034393-1034393 FN2588-S SNP T -> C AC=1;AN=198;BQB=0.264532;DP=4014;DP4=1865,1816,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.54875e-11;MQSB=0.99998;RPB=0.8499;SGB=12.5396;VDB=0.0988616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D1522G|1581|LOC_Os05g02860|protein_coding|CODING|LOC_Os05g02860.1|5|1) FN3858-S.SNP.5:1047964 chr05:001047964 0 W/1047964-1047964 FN3858-S SNP A -> G AC=1;AN=158;BQB=0.738929;DP=2743;DP4=1166,1459,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.87263e-08;MQSB=0.99878;RPB=0.259804;SGB=30.704;VDB=0.0706833;EFF=INTRON(MODIFIER||||323|LOC_Os05g02880|protein_coding|CODING|LOC_Os05g02880.1|2|1) FN-84.SNP.5:1056345 chr05:001056345 0 W/1056345-1056345 FN-84 Single Base Substitution C-T INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1565-S.SNP.5:1056479 chr05:001056479 0 W/1056479-1056479 FN1565-S Single Base Substitution A-C INTERGENIC Homo SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2662-S.SNP.5:1060047 chr05:001060047 0 W/1060047-1060047 FN2662-S SNP G -> T AC=2;AN=200;BQB=0.638346;DP=4824;DP4=2403,2153,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.3028e-25;MQSB=0.914933;RPB=0.865601;SGB=141.214;VDB=0.114334;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.5:1072603 chr05:001072603 0 W/1072603-1072603 FN-94 Single Base Substitution C-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN3795-S.SNP.5:1075263 chr05:001075263 0 W/1075263-1075263 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.669194;DP=2142;DP4=1172,839,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000507498;MQSB=0.266804;RPB=0.177099;SGB=18.3316;VDB=0.587356;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.5:1075323 chr05:001075323 0 W/1075323-1075323 FN-127 Single Base Substitution G-T INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1204-S.SNP.5:1078217 chr05:001078217 0 W/1078217-1078217 FN1204-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN3381-S.SNP.5:1080465 chr05:001080465 0 W/1080465-1080465 FN3381-S SNP G -> C AC=1;AN=184;BQB=0.87768;DP=3449;DP4=1752,1589,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.1709e-08;MQSB=0.43283;RPB=0.108514;SGB=32.2261;VDB=0.132714;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.5:1086193 chr05:001086193 0 W/1086193-1086193 W450-6-1 Single Base Substitution C-A INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-197.SNP.5:1087772 chr05:001087772 0 W/1087772-1087772 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN1076-S.SNP.5:1094161 chr05:001094161 0 W/1094161-1094161 FN1076-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g02950 retrotransposon protein, putative, unclassified, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3651-S.SNP.5:1098151 chr05:001098151 0 W/1098151-1098151 FN3651-S SNP G -> A AC=1;AN=190;BQB=0.995404;DP=1926;DP4=769,1080,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000519211;MQB=0.000137721;MQSB=0.628643;RPB=0.981963;SGB=25.439;VDB=0.38593;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T829I|884|LOC_Os05g02960|protein_coding|CODING|LOC_Os05g02960.1|3|1) FN3323-S.SNP.5:1098877 chr05:001098877 0 W/1098877-1098877 FN3323-S SNP G -> A AC=1;AN=184;BQB=0.29673;DP=3122;DP4=1564,1478,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.02858e-05;MQSB=0.885132;RPB=0.0073198;SGB=15.7097;VDB=0.13933;EFF=INTRON(MODIFIER||||884|LOC_Os05g02960|protein_coding|CODING|LOC_Os05g02960.1|2|1) FN2677-S.SNP.5:1103642 chr05:001103642 0 W/1103642-1103642 FN2677-S SNP C -> A AC=1;AN=200;BQB=0.696048;DP=4658;DP4=2231,2168,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52697e-11;MQSB=0.942524;RPB=0.264204;SGB=86.5007;VDB=0.752673;EFF=INTRON(MODIFIER||||179|LOC_Os05g02970|protein_coding|CODING|LOC_Os05g02970.1|1|1) FN4260-S.SNP.5:1104597 chr05:001104597 0 W/1104597-1104597 FN4260-S SNP A -> T AC=1;AN=170;BQB=0.992958;DP=2619;DP4=1203,1298,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.81087e-09;MQSB=0.991398;RPB=0.995039;SGB=45.206;VDB=0.68766;EFF=INTRON(MODIFIER||||179|LOC_Os05g02970|protein_coding|CODING|LOC_Os05g02970.1|3|1) FN3861-S.SNP.5:1106401 chr05:001106401 0 W/1106401-1106401 FN3861-S SNP C -> A AC=1;AN=158;BQB=0.811436;DP=2719;DP4=1137,1412,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.32328e-05;MQSB=0.999928;RPB=0.982079;SGB=30.704;VDB=0.45895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.5:1106415 chr05:001106415 0 W/1106415-1106415 FN1764-S SNP G -> A AC=1;AN=186;BQB=0.0929193;DP=4172;DP4=1938,2191,6,19;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.71882e-07;MQSB=0.961746;RPB=0.798647;SGB=-157.8;VDB=0.169797;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.5:1114546 chr05:001114546 0 W/1114546-1114546 FN1761-S SNP T -> A AC=2;AN=188;BQB=0.537337;DP=4201;DP4=2112,2024,21,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.00791e-17;MQSB=0.842503;RPB=0.563192;SGB=-4.67716;VDB=0.321242;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.5:1122048 chr05:001122048 0 W/1122048-1122048 FN811-S Single Base Substitution C-T INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN539-S.SNP.5:1129427 chr05:001129427 0 W/1129427-1129427 FN539-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN-298.SNP.5:1133433 chr05:001133433 0 W/1133433-1133433 FN-298 Single Base Substitution G-A INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN463-S.SNP.5:1134223 chr05:001134223 0 W/1134223-1134223 FN463-S Single Base Substitution G-A INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1330-S.SNP.5:1139609 chr05:001139609 0 W/1139609-1139609 FN1330-S Single Base Substitution A-T INTRON HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN566-S.SNP.5:1139613 chr05:001139613 0 W/1139613-1139613 FN566-S Single Base Substitution T-G INTRON HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-210.SNP.5:1141157 chr05:001141157 0 W/1141157-1141157 FN-210 Single Base Substitution G-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN1278-S.SNP.5:1141702 chr05:001141702 0 W/1141702-1141702 FN1278-S Single Base Substitution C-T INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN551-S.SNP.5:1164647 chr05:001164647 0 W/1164647-1164647 FN551-S Single Base Substitution G-A INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. W470-2-1.SNP.5:1165105 chr05:001165105 0 W/1165105-1165105 W470-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3743-S.SNP.5:1166697 chr05:001166697 0 W/1166697-1166697 FN3743-S SNP C -> G AC=2;AN=190;BQB=0.727941;DP=2882;DP4=1250,1465,11,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.0727e-14;MQSB=0.817098;RPB=0.900136;SGB=114.286;VDB=0.0518866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.5:1171173 chr05:001171173 0 W/1171173-1171173 FN1007-S Single Base Substitution T-G INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2318.SNP.5:1174285 chr05:001174285 0 W/1174285-1174285 FN2318 SNP T -> C AC=1;AN=192;BQB=0.720806;DP=4508;DP4=1586,2494,11,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.69947e-16;MQSB=0.99602;RPB=0.994794;SGB=-42.2982;VDB=0.0161442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.5:1174523 chr05:001174523 0 W/1174523-1174523 FN3656-S SNP A -> T AC=1;AN=190;BQB=0.864035;DP=2758;DP4=1479,1103,1,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000195443;MQSB=0.984484;RPB=0.531299;SGB=25.439;VDB=0.567012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.5:1178476 chr05:001178476 0 W/1178476-1178476 FN2232-S SNP C -> G AC=2;AN=190;BQB=0.302697;DP=4773;DP4=1867,2383,11,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93395e-16;MQSB=0.449718;RPB=0.993753;SGB=140.173;VDB=0.154484;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.5:1196924 chr05:001196924 0 W/1196924-1196924 FN621-S Single Base Substitution T-C INTRON HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN4134-S.SNP.5:1205568 chr05:001205568 0 W/1205568-1205568 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.961966;DP=2843;DP4=1527,1248,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00175871;MQB=0.0145792;MQSB=0.516953;RPB=0.242351;SGB=30.5793;VDB=0.146847;EFF=INTRON(MODIFIER||||1034|LOC_Os05g03080|protein_coding|CODING|LOC_Os05g03080.1|1|1) FN2596-S.SNP.5:1205643 chr05:001205643 0 W/1205643-1205643 FN2596-S SNP C -> G AC=2;AN=198;BQB=0.818262;DP=4243;DP4=1929,2050,15,18;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00306387;MQB=3.73589e-06;MQSB=0.999363;RPB=0.83813;SGB=108.456;VDB=0.0884587;EFF=INTRON(MODIFIER||||1034|LOC_Os05g03080|protein_coding|CODING|LOC_Os05g03080.1|1|1) FN588-S.SNP.5:1212517 chr05:001212517 0 W/1212517-1212517 FN588-S Single Base Substitution G-A SPLICE_SITE_ACCEPTOR HET LOC_Os05g03080 expressed protein SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN1388-S.SNP.5:1216803 chr05:001216803 0 W/1216803-1216803 FN1388-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g03090 transposon protein, putative, unclassified, expressed SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN4271-S.SNP.5:1226990 chr05:001226990 0 W/1226990-1226990 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.985102;DP=2665;DP4=1221,1365,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.41871e-10;MQSB=0.991782;RPB=0.931688;SGB=41.7633;VDB=0.586032;EFF=INTRON(MODIFIER||||1203|LOC_Os05g03100|protein_coding|CODING|LOC_Os05g03100.1|7|1) FN3547-S.SNP.5:1227340 chr05:001227340 0 W/1227340-1227340 FN3547-S SNP C -> A AC=1;AN=188;BQB=0.950737;DP=2702;DP4=1438,1198,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.7907e-05;MQSB=0.834664;RPB=0.831597;SGB=35.3493;VDB=0.194649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L612I|1203|LOC_Os05g03100|protein_coding|CODING|LOC_Os05g03100.1|9|1) FN_846-8-1.SNP.5:1227374 chr05:001227374 0 W/1227374-1227374 FN_846-8-1 Single Base Substitution G-A HET LOC_Os05g03100 HECT-domain domain containing protein, expressed SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN-60.SNP.5:1227968 chr05:001227968 0 W/1227968-1227968 FN-60 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g03100 HECT-domain domain containing protein, expressed SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1462-S.SNP.5:1228267 chr05:001228267 0 W/1228267-1228267 FN1462-S Single Base Substitution A-T STOP_GAINED HET LOC_Os05g03100 HECT-domain domain containing protein, expressed SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3799-S.SNP.5:1234612 chr05:001234612 0 W/1234612-1234612 FN3799-S SNP A -> G AC=2;AN=190;BQB=0.91152;DP=2489;DP4=1222,1124,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.84291e-11;MQSB=0.996102;RPB=0.0537052;SGB=68.0854;VDB=0.0156311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.5:1236205 chr05:001236205 0 W/1236205-1236205 FN2609-S SNP T -> A AC=1;AN=198;BQB=0.943002;DP=4498;DP4=2171,2047,18,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.24211e-18;MQSB=0.68464;RPB=0.996054;SGB=112.051;VDB=0.821141;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.5:1238892 chr05:001238892 0 W/1238892-1238892 FN4112-S SNP T -> G AC=1;AN=182;BQB=0.68488;DP=2361;DP4=1181,1128,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.04061e-08;MQSB=0.969565;RPB=0.943352;SGB=20.6332;VDB=0.347979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.5:1262773 chr05:001262773 0 W/1262773-1262773 FN3565-S SNP C -> T AC=1;AN=188;BQB=0.628448;DP=2830;DP4=1221,1525,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.23236e-10;MQSB=0.996469;RPB=0.941369;SGB=57.244;VDB=0.260024;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.5:1271151 chr05:001271151 0 W/1271151-1271151 FN-296 Single Base Substitution C-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-279.SNP.5:1285772 chr05:001285772 0 W/1285772-1285772 FN-279 Single Base Substitution C-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. W470-2-1.SNP.5:1301611 chr05:001301611 0 W/1301611-1301611 W470-2-1 Single Base Substitution C-A INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN835-S.SNP.5:1306373 chr05:001306373 0 W/1306373-1306373 FN835-S Single Base Substitution T-C INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN3866-S.SNP.5:1307094 chr05:001307094 0 W/1307094-1307094 FN3866-S SNP C -> G AC=2;AN=158;BQB=0.726282;DP=1936;DP4=771,1029,10,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.947e-08;MQSB=0.042325;RPB=0.98446;SGB=35.6659;VDB=0.643148;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccG|P58|224|LOC_Os05g03230|protein_coding|CODING|LOC_Os05g03230.1|1|1) FN1644-S.SNP.5:1321768 chr05:001321768 0 W/1321768-1321768 FN1644-S Single Base Substitution G-A INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1039-S.SNP.5:1337196 chr05:001337196 0 W/1337196-1337196 FN1039-S Single Base Substitution C-T INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1039-S.SNP.5:1337300 chr05:001337300 0 W/1337300-1337300 FN1039-S Single Base Substitution C-G INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1470-S.SNP.5:1339176 chr05:001339176 0 W/1339176-1339176 FN1470-S Single Base Substitution C-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN4125-S.SNP.5:1346825 chr05:001346825 0 W/1346825-1346825 FN4125-S SNP T -> A AC=1;AN=182;BQB=0.795056;DP=3055;DP4=1551,1457,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.36982e-09;MQSB=0.710769;RPB=0.914073;SGB=46.1603;VDB=0.345082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y465N|662|LOC_Os05g03310|protein_coding|CODING|LOC_Os05g03310.1|2|1) FN-105.SNP.5:1347366 chr05:001347366 0 W/1347366-1347366 FN-105 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g03310 expressed protein SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2260-S.SNP.5:1357623 chr05:001357623 0 W/1357623-1357623 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.999443;DP=4819;DP4=2252,2237,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51806e-12;MQSB=0.542263;RPB=0.718395;SGB=44.0907;VDB=0.387943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.5:1358777 chr05:001358777 0 W/1358777-1358777 FN1540-S Single Base Substitution T-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1151-S.SNP.5:1375773 chr05:001375773 0 W/1375773-1375773 FN1151-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN410-S.SNP.5:1376982 chr05:001376982 0 W/1376982-1376982 FN410-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN410-S.SNP.5:1377011 chr05:001377011 0 W/1377011-1377011 FN410-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g03350 retrotransposon protein, putative, unclassified, expressed SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN410-S.SNP.5:1377012 chr05:001377012 0 W/1377012-1377012 FN410-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN920-S.SNP.5:1378163 chr05:001378163 0 W/1378163-1378163 FN920-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g03360 retrotransposon protein, putative, unclassified, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN410-S.SNP.5:1378827 chr05:001378827 0 W/1378827-1378827 FN410-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g03360 retrotransposon protein, putative, unclassified, expressed SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2537-S.SNP.5:1378859 chr05:001378859 0 W/1378859-1378859 FN2537-S SNP T -> C AC=1;AN=198;BQB=0.89792;DP=4061;DP4=1949,1881,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000984979;MQB=0.00041853;MQSB=0.995066;RPB=0.772657;SGB=58.7391;VDB=0.386171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y1647C|2027|LOC_Os05g03360|protein_coding|CODING|LOC_Os05g03360.1|2|1) FN2620-S.SNP.5:1380660 chr05:001380660 0 W/1380660-1380660 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.861288;DP=4044;DP4=2143,1678,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.11751e-11;MQSB=0.988688;RPB=0.996353;SGB=113.881;VDB=0.770251;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E1047*|2027|LOC_Os05g03360|protein_coding|CODING|LOC_Os05g03360.1|2|1) FN1329-S.SNP.5:1390029 chr05:001390029 0 W/1390029-1390029 FN1329-S Single Base Substitution A-T INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1313-S.SNP.5:1401507 chr05:001401507 0 W/1401507-1401507 FN1313-S Single Base Substitution T-G INTRON HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1764-S.SNP.5:1407266 chr05:001407266 0 W/1407266-1407266 FN1764-S SNP A -> G AC=1;AN=188;BQB=0.846309;DP=3963;DP4=1981,1957,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.50312e-07;MQSB=0.982637;RPB=1;SGB=8.62479;VDB=0.0445549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.5:1413048 chr05:001413048 0 W/1413048-1413048 FN3419-S SNP G -> C AC=1;AN=184;BQB=0.984755;DP=2525;DP4=1326,1129,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.50784e-05;MQSB=0.0255555;RPB=0.497492;SGB=30.6558;VDB=0.149607;EFF=UTR_3_PRIME(MODIFIER||411||837|LOC_Os05g03400|protein_coding|CODING|LOC_Os05g03400.1|1|1) FN-364.SNP.5:1431902 chr05:001431902 0 W/1431902-1431902 FN-364 Single Base Substitution A-G INTRON HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3786-S.SNP.5:1441007 chr05:001441007 0 W/1441007-1441007 FN3786-S SNP C -> T AC=1;AN=190;BQB=0.632183;DP=2532;DP4=1238,1151,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.94103e-07;MQSB=0.17878;RPB=0.974054;SGB=62.7569;VDB=0.305467;EFF=UTR_3_PRIME(MODIFIER||264||385|LOC_Os05g03440|protein_coding|CODING|LOC_Os05g03440.1|1|1) FN1613-S.SNP.5:1450048 chr05:001450048 0 W/1450048-1450048 FN1613-S Single Base Substitution C-T INTERGENIC Homo SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN950-S.SNP.5:1450580 chr05:001450580 0 W/1450580-1450580 FN950-S Single Base Substitution A-T INTERGENIC HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN276-S.SNP.5:1452075 chr05:001452075 0 W/1452075-1452075 FN276-S Single Base Substitution A-T INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-361.SNP.5:1461033 chr05:001461033 0 W/1461033-1461033 FN-361 Single Base Substitution T-A INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN726-S.SNP.5:1467670 chr05:001467670 0 W/1467670-1467670 FN726-S Single Base Substitution G-A INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN4103-S.SNP.5:1484471 chr05:001484471 0 W/1484471-1484471 FN4103-S SNP G -> T AC=1;AN=182;BQB=0.948746;DP=2699;DP4=1222,1400,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.1116e-06;MQSB=0.994292;RPB=0.423697;SGB=35.0899;VDB=0.407048;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.5:1484505 chr05:001484505 0 W/1484505-1484505 FN757-S Single Base Substitution G-A INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2299.SNP.5:1490984 chr05:001490984 0 W/1490984-1490984 FN2299 SNP G -> A AC=1;AN=192;BQB=0.18667;DP=4932;DP4=2179,2477,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.14561e-08;MQSB=0.443164;RPB=0.838102;SGB=7.3548;VDB=0.966132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R397K|414|LOC_Os05g03520|protein_coding|CODING|LOC_Os05g03520.1|1|1) FN-363.SNP.5:1498436 chr05:001498436 0 W/1498436-1498436 FN-363 Single Base Substitution T-A INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-145.SNP.5:1499902 chr05:001499902 0 W/1499902-1499902 FN-145 Single Base Substitution A-T INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1367-S.SNP.5:1504588 chr05:001504588 0 W/1504588-1504588 FN1367-S Single Base Substitution C-T INTRON HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN-236.SNP.5:1510191 chr05:001510191 0 W/1510191-1510191 FN-236 Single Base Substitution A-T INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN798-S.SNP.5:1511906 chr05:001511906 0 W/1511906-1511906 FN798-S Single Base Substitution T-A INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. W246-5-1.SNP.5:1511906 chr05:001511906 0 W/1511906-1511906 W246-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3687-S.SNP.5:1512434 chr05:001512434 0 W/1512434-1512434 FN3687-S SNP A -> C AC=1;AN=190;BQB=0.970906;DP=2794;DP4=1302,1373,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.67372e-05;MQSB=0.907931;RPB=0.338645;SGB=35.4339;VDB=0.943893;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.5:1513392 chr05:001513392 0 W/1513392-1513392 FN624-S Single Base Substitution G-A INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN590-S.SNP.5:1522741 chr05:001522741 0 W/1522741-1522741 FN590-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN2126-S.SNP.5:1530099 chr05:001530099 0 W/1530099-1530099 FN2126-S SNP G -> A AC=1;AN=168;BQB=0.992088;DP=2170;DP4=1066,1008,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.27562e-05;MQSB=0.587291;RPB=0.942068;SGB=12.4615;VDB=0.690053;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.5:1531463 chr05:001531463 0 W/1531463-1531463 FN568-S Single Base Substitution C-T INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4108-S.SNP.5:1533410 chr05:001533410 0 W/1533410-1533410 FN4108-S SNP C -> T AC=2;AN=182;BQB=0.999552;DP=2977;DP4=1347,1499,14,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.6551e-19;MQSB=0.844626;RPB=0.997713;SGB=152.372;VDB=0.292922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.5:1533696 chr05:001533696 0 W/1533696-1533696 FN3842-S SNP A -> T AC=1;AN=190;BQB=0.960946;DP=2724;DP4=1322,1269,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06748e-08;MQSB=0.958501;RPB=0.987135;SGB=7.21887;VDB=0.753378;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.5:1554956 chr05:001554956 0 W/1554956-1554956 FN714-S Single Base Substitution T-G INTRON HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1203-S.SNP.5:1561712 chr05:001561712 0 W/1561712-1561712 FN1203-S Single Base Substitution T-C INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN2178-S.SNP.5:1573103 chr05:001573103 0 W/1573103-1573103 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.00322686;DP=3663;DP4=1978,1638,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.23843e-06;MQSB=0.891849;RPB=0.871212;SGB=-115.779;VDB=0.72808;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.5:1574856 chr05:001574856 0 W/1574856-1574856 W450-6-1 Single Base Substitution T-G INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-176.SNP.5:1576490 chr05:001576490 0 W/1576490-1576490 FN-176 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2676-S.SNP.5:1577885 chr05:001577885 0 W/1577885-1577885 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.948716;DP=4560;DP4=2048,2082,18,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71629e-21;MQSB=0.867221;RPB=0.540585;SGB=81.5883;VDB=0.481075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P499L|1027|LOC_Os05g03650|protein_coding|CODING|LOC_Os05g03650.1|3|1) FN865-S.SNP.5:1579761 chr05:001579761 0 W/1579761-1579761 FN865-S Single Base Substitution A-G INTRON HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN3555-S.SNP.5:1582214 chr05:001582214 0 W/1582214-1582214 FN3555-S SNP G -> A AC=1;AN=188;BQB=0.545534;DP=4284;DP4=2009,2169,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.11316e-06;MQSB=0.982235;RPB=0.892086;SGB=39.5276;VDB=0.96723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V923I|1027|LOC_Os05g03650|protein_coding|CODING|LOC_Os05g03650.1|5|1) FN-330.SNP.5:1583087 chr05:001583087 0 W/1583087-1583087 FN-330 Single Base Substitution G-A INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1295-S.SNP.5:1589108 chr05:001589108 0 W/1589108-1589108 FN1295-S Single Base Substitution G-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3820-S.SNP.5:1591781 chr05:001591781 0 W/1591781-1591781 FN3820-S SNP A -> G AC=1;AN=190;BQB=0.741661;DP=3014;DP4=1347,1584,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0487724;MQB=0.198663;MQSB=2.56736e-18;RPB=0.168083;SGB=44.5415;VDB=0.623847;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I994|1778|LOC_Os05g03670|protein_coding|CODING|LOC_Os05g03670.1|3|1) FN893-S.SNP.5:1597388 chr05:001597388 0 W/1597388-1597388 FN893-S Single Base Substitution G-T INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3815-S.SNP.5:1605692 chr05:001605692 0 W/1605692-1605692 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.766014;DP=3291;DP4=1370,1809,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0230933;MQB=0.11435;MQSB=0.720226;RPB=0.998307;SGB=44.5415;VDB=0.150242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P682T|1686|LOC_Os05g03690|protein_coding|CODING|LOC_Os05g03690.1|3|1) FN767-S.SNP.5:1611557 chr05:001611557 0 W/1611557-1611557 FN767-S Single Base Substitution T-C INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN923-S.SNP.5:1612621 chr05:001612621 0 W/1612621-1612621 FN923-S Single Base Substitution G-A INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN-75.SNP.5:1614348 chr05:001614348 0 W/1614348-1614348 FN-75 Single Base Substitution G-C INTERGENIC HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2655-S.SNP.5:1621727 chr05:001621727 0 W/1621727-1621727 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.88303;DP=4781;DP4=2311,2202,17,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000836645;MQB=6.12262e-13;MQSB=0.978582;RPB=0.999278;SGB=94.3471;VDB=0.738769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T96M|936|LOC_Os05g03710|protein_coding|CODING|LOC_Os05g03710.1|1|1) FN320-S.SNP.5:1622338 chr05:001622338 0 W/1622338-1622338 FN320-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g03710 retrotransposon protein, putative, unclassified SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3535-S.SNP.5:1623745 chr05:001623745 0 W/1623745-1623745 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.494361;DP=4756;DP4=2384,2258,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0317494;MQB=0.688163;MQSB=0.2613;RPB=0.22627;SGB=50.1574;VDB=0.906442;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R735|936|LOC_Os05g03710|protein_coding|CODING|LOC_Os05g03710.1|2|1) FN2551-S.SNP.5:1628488 chr05:001628488 0 W/1628488-1628488 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.725636;DP=3587;DP4=1592,1806,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00836353;MQB=0.74722;MQSB=0.611496;RPB=0.285719;SGB=109.285;VDB=0.453203;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.5:1638972 chr05:001638972 0 W/1638972-1638972 FN-198 Single Base Substitution G-A INTERGENIC HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2441.SNP.5:1638972 chr05:001638972 0 W/1638972-1638972 FN2441 SNP G -> A AC=1;AN=200;BQB=0.962612;DP=1723;DP4=1146,440,6,2;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.00986651;MQB=0.934767;MQSB=5.684e-37;RPB=0.999998;SGB=18.639;VDB=0.0694872;EFF=INTERGENIC(MODIFIER||||||||||1) FN4145-S.SNP.5:1638972 chr05:001638972 0 W/1638972-1638972 FN4145-S SNP G -> A AC=2;AN=170;BQB=0.997928;DP=1831;DP4=840,930,3,6;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.0316767;MQB=0.998561;MQSB=9.25682e-16;RPB=0.345204;SGB=34.5445;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.5:1653688 chr05:001653688 0 W/1653688-1653688 FN498-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN498-S.SNP.5:1653689 chr05:001653689 0 W/1653689-1653689 FN498-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN-215.SNP.5:1655139 chr05:001655139 0 W/1655139-1655139 FN-215 Single Base Substitution G-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-214.SNP.5:1658179 chr05:001658179 0 W/1658179-1658179 FN-214 Single Base Substitution G-A INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3837-S.SNP.5:1661440 chr05:001661440 0 W/1661440-1661440 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.943115;DP=2150;DP4=796,1279,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.13188e-06;MQSB=0.449268;RPB=0.702592;SGB=35.4339;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.5:1662342 chr05:001662342 0 W/1662342-1662342 FN1286-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g03760 zinc finger family protein, putative, expressed SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2089-S.SNP.5:1666989 chr05:001666989 0 W/1666989-1666989 FN2089-S SNP C -> T AC=1;AN=168;BQB=0.112853;DP=3632;DP4=1834,1767,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.12385e-05;MQSB=0.963887;RPB=0.09284;SGB=-36.0898;VDB=0.607298;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L296|364|LOC_Os05g03770|protein_coding|CODING|LOC_Os05g03770.1|2|1) FN3786-S.SNP.5:1668415 chr05:001668415 0 W/1668415-1668415 FN3786-S SNP C -> T AC=1;AN=190;BQB=0.891501;DP=2422;DP4=1083,1243,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80932e-06;MQSB=0.940457;RPB=0.326477;SGB=35.4339;VDB=0.0718442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A114T|364|LOC_Os05g03770|protein_coding|CODING|LOC_Os05g03770.1|1|1) FN1536-S.SNP.5:1670852 chr05:001670852 0 W/1670852-1670852 FN1536-S Single Base Substitution T-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2084-S.SNP.5:1678204 chr05:001678204 0 W/1678204-1678204 FN2084-S SNP A -> T AC=1;AN=168;BQB=0.450572;DP=3295;DP4=1407,1866,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.68338e-07;MQSB=0.967804;RPB=0.144604;SGB=2.75988;VDB=0.387204;EFF=INTRON(MODIFIER||||418|LOC_Os05g03780|protein_coding|CODING|LOC_Os05g03780.1|1|1) FN2649-S.SNP.5:1679366 chr05:001679366 0 W/1679366-1679366 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.997221;DP=4557;DP4=2591,1638,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5195e-12;MQSB=0.870141;RPB=0.308804;SGB=104.921;VDB=0.262873;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.5:1679745 chr05:001679745 0 W/1679745-1679745 FN-86 Single Base Substitution G-T INTERGENIC HOMO SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN-274.SNP.5:1682074 chr05:001682074 0 W/1682074-1682074 FN-274 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4312-S.SNP.5:1682944 chr05:001682944 0 W/1682944-1682944 FN4312-S SNP C -> A AC=1;AN=170;BQB=0.986245;DP=2379;DP4=1207,1124,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.27647e-07;MQSB=0.940214;RPB=0.621433;SGB=38.987;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.5:1684994 chr05:001684994 0 W/1684994-1684994 FN360-S Single Base Substitution T-A INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN360-S.SNP.5:1684999 chr05:001684999 0 W/1684999-1684999 FN360-S Single Base Substitution G-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3707-S.SNP.5:1695453 chr05:001695453 0 W/1695453-1695453 FN3707-S SNP T -> C AC=1;AN=190;BQB=0.995604;DP=3015;DP4=1500,1429,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00165837;MQB=9.81337e-10;MQSB=0.996091;RPB=0.979961;SGB=75.1932;VDB=0.355057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S205G|272|LOC_Os05g03810|protein_coding|CODING|LOC_Os05g03810.1|6|1) FN3416-S.SNP.5:1695715 chr05:001695715 0 W/1695715-1695715 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.973626;DP=3333;DP4=1932,1292,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.116412;MQB=0.0218065;MQSB=0.273218;RPB=0.216124;SGB=44.2207;VDB=0.727158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P147L|272|LOC_Os05g03810|protein_coding|CODING|LOC_Os05g03810.1|5|1) FN884-S.SNP.5:1697357 chr05:001697357 0 W/1697357-1697357 FN884-S Single Base Substitution G-A INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1236-S.SNP.5:1697516 chr05:001697516 0 W/1697516-1697516 FN1236-S Single Base Substitution A-G INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1673-S.SNP.5:1698941 chr05:001698941 0 W/1698941-1698941 FN1673-S SNP G -> A AC=2;AN=188;BQB=0.853466;DP=2185;DP4=1380,743,14,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.02854e-11;MQSB=0.00656994;RPB=0.939689;SGB=60.7873;VDB=0.561811;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K75|492|LOC_Os05g03820|protein_coding|CODING|LOC_Os05g03820.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K75|492|LOC_Os05g03820|protein_coding|CODING|LOC_Os05g03820.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K75|492|LOC_Os05g03820|protein_coding|CODING|LOC_Os05g03820.2|2|1) FN-234.SNP.5:1704313 chr05:001704313 0 W/1704313-1704313 FN-234 Single Base Substitution C-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2639-S.SNP.5:1711427 chr05:001711427 0 W/1711427-1711427 FN2639-S SNP A -> T AC=1;AN=200;BQB=0.272498;DP=4722;DP4=2343,2205,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.14846e-15;MQSB=0.880024;RPB=0.968984;SGB=76.3213;VDB=0.765201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.5:1711658 chr05:001711658 0 W/1711658-1711658 FN2239-S SNP A -> T AC=1;AN=190;BQB=0.799504;DP=4893;DP4=2467,2055,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21465e-07;MQSB=0.9019;RPB=0.999546;SGB=36.1006;VDB=0.360442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.5:1714082 chr05:001714082 0 W/1714082-1714082 FN2376 SNP A -> C AC=1;AN=192;BQB=0.00770791;DP=4509;DP4=2063,2172,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.02328e-06;MQSB=0.988711;RPB=0.86812;SGB=7.3548;VDB=0.515604;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.5:1718295 chr05:001718295 0 W/1718295-1718295 FN-208 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2467.SNP.5:1721619 chr05:001721619 0 W/1721619-1721619 FN2467 SNP G -> C AC=1;AN=200;BQB=0.608756;DP=4714;DP4=2083,2370,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.6388e-07;MQSB=0.557546;RPB=0.803185;SGB=29.4541;VDB=0.312001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.5:1723861 chr05:001723861 0 W/1723861-1723861 FN1265-S Single Base Substitution T-G INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3858-S.SNP.5:1724178 chr05:001724178 0 W/1724178-1724178 FN3858-S SNP G -> T AC=1;AN=158;BQB=0.975213;DP=2599;DP4=1181,1342,9,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.09837e-06;MQSB=0.86933;RPB=0.948039;SGB=42.6978;VDB=0.702665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.5:1724749 chr05:001724749 0 W/1724749-1724749 FN3833-S SNP T -> C AC=1;AN=190;BQB=0.453855;DP=2885;DP4=1489,1284,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06045e-05;MQSB=0.993568;RPB=0.685388;SGB=39.6545;VDB=0.876668;EFF=UTR_3_PRIME(MODIFIER||113||311|LOC_Os05g03884|protein_coding|CODING|LOC_Os05g03884.1|5|1) FN2442.SNP.5:1733103 chr05:001733103 0 W/1733103-1733103 FN2442 SNP C -> T AC=2;AN=200;BQB=0.536497;DP=4496;DP4=1872,2220,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00022242;MQB=5.50414e-23;MQSB=0.994613;RPB=0.895371;SGB=-45.1863;VDB=0.646358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.5:1761646 chr05:001761646 0 W/1761646-1761646 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.376646;DP=5248;DP4=2442,2483,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53232e-12;MQSB=0.840412;RPB=0.220652;SGB=-39.8934;VDB=0.958076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.5:1762529 chr05:001762529 0 W/1762529-1762529 FN1176-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-339.SNP.5:1762616 chr05:001762616 0 W/1762616-1762616 FN-339 Single Base Substitution C-T UTR_3_PRIME HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN3575-S.SNP.5:1765066 chr05:001765066 0 W/1765066-1765066 FN3575-S SNP G -> A AC=1;AN=188;BQB=0.935914;DP=3433;DP4=1989,1344,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0029129;MQB=0.000716174;MQSB=0.981883;RPB=0.937771;SGB=62.6088;VDB=0.462892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.5:1766437 chr05:001766437 0 W/1766437-1766437 FN1499-S Single Base Substitution A-T INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2086-S.SNP.5:1778308 chr05:001778308 0 W/1778308-1778308 FN2086-S SNP T -> A AC=2;AN=168;BQB=0.999984;DP=2365;DP4=1820,510,19,7;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.17725e-11;MQSB=0.906824;RPB=0.403722;SGB=48.9237;VDB=0.726782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.5:1778692 chr05:001778692 0 W/1778692-1778692 FN1112-S Single Base Substitution T-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1073-S.SNP.5:1780684 chr05:001780684 0 W/1780684-1780684 FN1073-S Single Base Substitution T-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN622-S.SNP.5:1781502 chr05:001781502 0 W/1781502-1781502 FN622-S Single Base Substitution T-G INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN1346-S.SNP.5:1783468 chr05:001783468 0 W/1783468-1783468 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1527-S.SNP.5:1785430 chr05:001785430 0 W/1785430-1785430 FN1527-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2600-S.SNP.5:1789209 chr05:001789209 0 W/1789209-1789209 FN2600-S SNP A -> G AC=1;AN=198;BQB=0.707617;DP=4065;DP4=1991,1899,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.51378e-14;MQSB=0.993367;RPB=0.793396;SGB=68.91;VDB=0.185969;EFF=INTRON(MODIFIER||||542|LOC_Os05g03972|protein_coding|CODING|LOC_Os05g03972.1|1|1) FN-339.SNP.5:1792170 chr05:001792170 0 W/1792170-1792170 FN-339 Single Base Substitution A-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1112-S.SNP.5:1797643 chr05:001797643 0 W/1797643-1797643 FN1112-S Single Base Substitution A-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1423-S.SNP.5:1799167 chr05:001799167 0 W/1799167-1799167 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4253-S.SNP.5:1799783 chr05:001799783 0 W/1799783-1799783 FN4253-S SNP C -> G AC=1;AN=170;BQB=0.908432;DP=2397;DP4=1158,1149,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000417188;MQB=2.21532e-05;MQSB=0.797352;RPB=0.966398;SGB=34.5445;VDB=0.671615;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R131|164|LOC_Os05g04010|protein_coding|CODING|LOC_Os05g04010.1|1|1) FN3940-S.SNP.5:1800082 chr05:001800082 0 W/1800082-1800082 FN3940-S SNP G -> A AC=2;AN=158;BQB=0.731157;DP=2442;DP4=1060,1276,13,14;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.0372645;MQB=0.380533;MQSB=0.00245311;RPB=0.999817;SGB=112.609;VDB=0.271005;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R32*|164|LOC_Os05g04010|protein_coding|CODING|LOC_Os05g04010.1|1|1) FN521-S.SNP.5:1800351 chr05:001800351 0 W/1800351-1800351 FN521-S Single Base Substitution A-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2547-S.SNP.5:1804339 chr05:001804339 0 W/1804339-1804339 FN2547-S SNP T -> C AC=1;AN=198;BQB=0.961311;DP=3998;DP4=1915,1864,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.45602e-05;MQSB=0.999602;RPB=0.991534;SGB=25.7687;VDB=0.727692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D507G|558|LOC_Os05g04020|protein_coding|CODING|LOC_Os05g04020.1|3|1) FN1069-S.SNP.5:1804760 chr05:001804760 0 W/1804760-1804760 FN1069-S Single Base Substitution C-G INTRON HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1709-S.SNP.5:1813905 chr05:001813905 0 W/1813905-1813905 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.877887;DP=1879;DP4=699,1109,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.285258;MQB=0.975072;MQSB=2.35205e-35;RPB=0.818002;SGB=10.1681;VDB=0.316956;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-S.SNP.5:1819747 chr05:001819747 0 W/1819747-1819747 FN75-S-S SNP T -> C AC=1;AN=190;BQB=0.260495;DP=4030;DP4=1892,1732,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0347395;MQB=0.0227275;MQSB=2.28088e-09;RPB=0.998207;SGB=-3.65821;VDB=0.723365;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P1211|1780|LOC_Os05g04040|protein_coding|CODING|LOC_Os05g04040.1|4|1) FN2128-S.SNP.5:1820140 chr05:001820140 0 W/1820140-1820140 FN2128-S SNP C -> G AC=2;AN=168;BQB=0.517997;DP=1659;DP4=811,797,6,7;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.17601;MQB=0.895565;MQSB=2.06814e-13;RPB=0.970196;SGB=17.3231;VDB=0.737558;EFF=INTRON(MODIFIER||||1780|LOC_Os05g04040|protein_coding|CODING|LOC_Os05g04040.1|3|1) FN1033-S.SNP.5:1825868 chr05:001825868 0 W/1825868-1825868 FN1033-S Single Base Substitution C-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4109-S.SNP.5:1828366 chr05:001828366 0 W/1828366-1828366 FN4109-S SNP A -> G AC=1;AN=182;BQB=0.980536;DP=2859;DP4=1467,1306,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.49534e-06;MQSB=0.912303;RPB=0.733889;SGB=35.0899;VDB=0.0571085;EFF=UTR_3_PRIME(MODIFIER||81||527|LOC_Os05g04060|protein_coding|CODING|LOC_Os05g04060.1|1|1) FN1650-S.SNP.5:1828370 chr05:001828370 0 W/1828370-1828370 FN1650-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN4030-S.SNP.5:1834308 chr05:001834308 0 W/1834308-1834308 FN4030-S SNP C -> T AC=1;AN=168;BQB=0.982356;DP=2248;DP4=970,1191,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00173827;MQSB=0.637103;RPB=0.620299;SGB=25.5891;VDB=0.0585364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.5:1848884 chr05:001848884 0 W/1848884-1848884 FN2546-S SNP G -> C AC=2;AN=198;BQB=0.93371;DP=3719;DP4=1921,1608,11,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.5355e-13;MQSB=0.319162;RPB=0.40168;SGB=76.1002;VDB=0.315989;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.5:1851521 chr05:001851521 0 W/1851521-1851521 FN3906-S SNP T -> G AC=1;AN=158;BQB=0.996427;DP=2513;DP4=1360,978,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.22044e-05;MQSB=0.852657;RPB=0.908724;SGB=38.3284;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3575-S.SNP.5:1861799 chr05:001861799 0 W/1861799-1861799 FN3575-S SNP A -> G AC=1;AN=188;BQB=0.967853;DP=2600;DP4=1190,1314,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.31668e-12;MQSB=0.93907;RPB=0.0959775;SGB=64.3306;VDB=0.703561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K148E|250|LOC_Os05g04150|protein_coding|CODING|LOC_Os05g04150.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K148E|250|LOC_Os05g04150|protein_coding|CODING|LOC_Os05g04150.2|2|1) FN1687-S.SNP.5:1876793 chr05:001876793 0 W/1876793-1876793 FN1687-S SNP T -> C AC=1;AN=188;BQB=0.372519;DP=3680;DP4=1625,1987,8,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.32974e-09;MQSB=0.814989;RPB=0.995317;SGB=-9.02352;VDB=0.123764;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.5:1878874 chr05:001878874 0 W/1878874-1878874 FN-365 Single Base Substitution C-A INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN1353-S.SNP.5:1890482 chr05:001890482 0 W/1890482-1890482 FN1353-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2698-S.SNP.5:1896467 chr05:001896467 0 W/1896467-1896467 FN2698-S SNP T -> A AC=1;AN=200;BQB=0.712213;DP=5056;DP4=2461,2378,19,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16678e-19;MQSB=0.700345;RPB=0.623929;SGB=137.609;VDB=0.192008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.5:1897778 chr05:001897778 0 W/1897778-1897778 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.693251;DP=5344;DP4=2245,2821,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2023e-17;MQSB=0.999255;RPB=0.989914;SGB=90.7419;VDB=0.886348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.5:1902100 chr05:001902100 0 W/1902100-1902100 FN2364 SNP T -> C AC=2;AN=192;BQB=0.695955;DP=4690;DP4=2250,2079,18,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.07268e-25;MQSB=0.657718;RPB=0.456104;SGB=181.577;VDB=0.180748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.5:1905128 chr05:001905128 0 W/1905128-1905128 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN951-S.SNP.5:1907146 chr05:001907146 0 W/1907146-1907146 FN951-S Single Base Substitution A-C INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN1656-S.SNP.5:1911547 chr05:001911547 0 W/1911547-1911547 FN1656-S Single Base Substitution G-C INTERGENIC Homo SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2209-S.SNP.5:1912532 chr05:001912532 0 W/1912532-1912532 FN2209-S SNP C -> T AC=1;AN=190;BQB=0.99779;DP=2520;DP4=894,1384,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000396825;MQB=0.000211619;MQSB=2.18822e-10;RPB=0.538303;SGB=62.7569;VDB=0.723187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.5:1914928 chr05:001914928 0 W/1914928-1914928 FN2440 SNP A -> G AC=1;AN=200;BQB=0.666147;DP=5025;DP4=2484,2238,16,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00923e-21;MQSB=0.999991;RPB=0.98057;SGB=119.583;VDB=0.54311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.5:1915288 chr05:001915288 0 W/1915288-1915288 FN1212-S Single Base Substitution T-A INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN620-S.SNP.5:1917247 chr05:001917247 0 W/1917247-1917247 FN620-S Single Base Substitution A-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN620-S.SNP.5:1917248 chr05:001917248 0 W/1917248-1917248 FN620-S Single Base Substitution G-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3422-S.SNP.5:1918505 chr05:001918505 0 W/1918505-1918505 FN3422-S SNP G -> T AC=1;AN=184;BQB=0.43151;DP=2377;DP4=1117,1204,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22056e-07;MQSB=0.887082;RPB=0.934626;SGB=35.7479;VDB=0.922112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.5:1918506 chr05:001918506 0 W/1918506-1918506 FN3422-S SNP C -> A AC=1;AN=184;BQB=0.921527;DP=2369;DP4=1115,1190,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00586e-08;MQSB=0.9439;RPB=0.805223;SGB=48.7425;VDB=0.790974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.5:1918510 chr05:001918510 0 W/1918510-1918510 FN3422-S SNP G -> C AC=1;AN=184;BQB=0.698322;DP=2383;DP4=1120,1200,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.64779e-09;MQSB=0.943788;RPB=0.917983;SGB=35.7479;VDB=0.661915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.5:1919616 chr05:001919616 0 W/1919616-1919616 FN2698-S SNP T -> A AC=1;AN=200;BQB=0.802005;DP=4896;DP4=2360,2359,23,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.70055e-28;MQSB=0.963398;RPB=0.395115;SGB=201.63;VDB=0.197792;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.5:1923530 chr05:001923530 0 W/1923530-1923530 FN_543-2-6 Single Base Substitution C-T Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN573-S.SNP.5:1924540 chr05:001924540 0 W/1924540-1924540 FN573-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g04220 nitrogen regulatory protein P-II, putative, expressed SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2150-S.SNP.5:1927427 chr05:001927427 0 W/1927427-1927427 FN2150-S SNP A -> T AC=1;AN=168;BQB=0.0870796;DP=3081;DP4=2086,958,19,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00445e-10;MQSB=0.782378;RPB=0.879883;SGB=21.3605;VDB=0.483218;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.5:1929293 chr05:001929293 0 W/1929293-1929293 FN-21 Single Base Substitution C-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN772-S.SNP.5:1930903 chr05:001930903 0 W/1930903-1930903 FN772-S Single Base Substitution C-G INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1563-S.SNP.5:1936660 chr05:001936660 0 W/1936660-1936660 FN1563-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os05g04250 expressed protein SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2153-S.SNP.5:1939728 chr05:001939728 0 W/1939728-1939728 FN2153-S SNP T -> A AC=1;AN=168;BQB=0.0101539;DP=4053;DP4=1839,2165,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00296077;MQB=6.04749e-05;MQSB=0.000160893;RPB=0.480151;SGB=-11.0644;VDB=0.860326;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A124|807|LOC_Os05g04260|protein_coding|CODING|LOC_Os05g04260.1|1|1) FN2709-S.SNP.5:1940125 chr05:001940125 0 W/1940125-1940125 FN2709-S SNP G -> C AC=1;AN=200;BQB=0.221768;DP=4915;DP4=2362,2288,4,6;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0136317;MQB=0.991555;MQSB=2.24151e-08;RPB=0.889465;SGB=40.4492;VDB=0.940371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E257Q|807|LOC_Os05g04260|protein_coding|CODING|LOC_Os05g04260.1|1|1) FN3535-S.SNP.5:1944073 chr05:001944073 0 W/1944073-1944073 FN3535-S SNP G -> C AC=1;AN=188;BQB=0.955905;DP=3317;DP4=1324,1946,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64903e-07;MQSB=0.989049;RPB=0.627901;SGB=48.979;VDB=0.173134;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.5:1948081 chr05:001948081 0 W/1948081-1948081 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.765905;DP=3862;DP4=1720,2014,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00802693;MQB=1.67611e-05;MQSB=0.824528;RPB=0.807163;SGB=43.0708;VDB=0.844399;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G317S|721|LOC_Os05g04290|protein_coding|CODING|LOC_Os05g04290.1|1|1) FN3784-S.SNP.5:1950951 chr05:001950951 0 W/1950951-1950951 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.500249;DP=2709;DP4=1482,1102,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0188261;MQB=1.5556e-06;MQSB=0.802419;RPB=0.609138;SGB=7.21887;VDB=0.0596272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.5:1957267 chr05:001957267 0 W/1957267-1957267 FN3574-S SNP G -> A AC=1;AN=188;BQB=0.376501;DP=4642;DP4=2363,2141,24,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.27378e-19;MQSB=0.00252424;RPB=0.695957;SGB=171.648;VDB=0.583291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.5:1964983 chr05:001964983 0 W/1964983-1964983 FN-262 Single Base Substitution C-T INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. 822-5-5.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 822-5-5 Single Base Substitution A-G INTERGENIC Homo SNo: 1493, Mutant_ID: 822-5-5, Generation: M2, Mutations: 21, Genes: 100, Seed availability: Yes. 822-5-6.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 822-5-6 Single Base Substitution A-G INTERGENIC Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-362.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN-362 Single Base Substitution A-G INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1122-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN1122-S Single Base Substitution A-G INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1348-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN1348-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1373-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN1373-S Single Base Substitution A-G INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1396-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN1396-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1707-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN1707-S SNP A -> G AC=2;AN=188;BQB=0.0359234;DP=3515;DP4=1397,2065,19,18;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.000284495;MQB=8.81977e-12;MQSB=1.95991e-14;RPB=0.480535;SGB=-3.59057;VDB=0.761471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN2491 SNP A -> G AC=2;AN=200;BQB=0.697017;DP=4894;DP4=2197,2478,14,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.38195e-19;MQSB=0.934149;RPB=0.991068;SGB=160.183;VDB=0.160492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN3554-S SNP A -> G AC=2;AN=188;BQB=0.668436;DP=2646;DP4=1264,1284,12,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07462e-14;MQSB=0.978307;RPB=0.220547;SGB=61.6823;VDB=0.593338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN3705-S SNP A -> G AC=2;AN=190;BQB=0.230978;DP=2511;DP4=991,1404,11,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26543e-08;MQSB=0.722545;RPB=0.277975;SGB=28.7675;VDB=0.906442;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN735-S Single Base Substitution A-G INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN846-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN846-S Single Base Substitution A-G INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN937-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN937-S Single Base Substitution A-G INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN957-S.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN957-S Single Base Substitution A-G INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN_822-5-1.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 FN_822-5-1 Single Base Substitution A-G Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. W42-1-3S-1.SNP.5:1965199 chr05:001965199 0 W/1965199-1965199 W42-1-3S-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3887-S.SNP.5:1974304 chr05:001974304 0 W/1974304-1974304 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.967688;DP=2394;DP4=1063,1145,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.83115e-08;MQSB=0.989615;RPB=0.325798;SGB=2.08615;VDB=0.387204;EFF=UTR_3_PRIME(MODIFIER||155||411|LOC_Os05g04340|protein_coding|CODING|LOC_Os05g04340.1|13|1),UTR_3_PRIME(MODIFIER||521||379|LOC_Os05g04340|protein_coding|CODING|LOC_Os05g04340.2|12|1),UTR_3_PRIME(MODIFIER||41||667|LOC_Os05g04330|protein_coding|CODING|LOC_Os05g04330.2|12|1) FN1499-S.SNP.5:1974411 chr05:001974411 0 W/1974411-1974411 FN1499-S Single Base Substitution G-A UTR_3_PRIME Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-189.SNP.5:1982016 chr05:001982016 0 W/1982016-1982016 FN-189 Single Base Substitution C-T INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3543-S.SNP.5:1982909 chr05:001982909 0 W/1982909-1982909 FN3543-S SNP A -> G AC=2;AN=188;BQB=0.562328;DP=2878;DP4=1308,1377,13,14;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00138985;MQB=8.06993e-09;MQSB=0.845212;RPB=0.69705;SGB=117.128;VDB=0.297839;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN-133 Single Base Substitution C-T INTERGENIC HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN-207.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN-207 Single Base Substitution C-T INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1573-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN1573-S Single Base Substitution C-T INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN230-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN230-S Single Base Substitution C-T INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2680-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN2680-S SNP C -> T AC=2;AN=200;BQB=0.320886;DP=4979;DP4=2116,2488,24,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.85647e-28;MQSB=0.95278;RPB=0.0332606;SGB=210.84;VDB=0.75752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN3781-S SNP C -> T AC=2;AN=190;BQB=0.900744;DP=2921;DP4=1233,1595,5,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.91335e-10;MQSB=0.994555;RPB=0.713833;SGB=53.8699;VDB=0.568203;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN4114-S SNP C -> T AC=2;AN=182;BQB=0.999538;DP=2976;DP4=1213,1680,9,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.45924e-17;MQSB=0.984564;RPB=0.314689;SGB=88.2906;VDB=0.13658;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.5:2004108 chr05:002004108 0 W/2004108-2004108 FN713-S Single Base Substitution C-T INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN409-S.SNP.5:2009262 chr05:002009262 0 W/2009262-2009262 FN409-S Single Base Substitution T-A INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2465.SNP.5:2015550 chr05:002015550 0 W/2015550-2015550 FN2465 SNP C -> T AC=1;AN=200;BQB=0.994841;DP=3684;DP4=1668,1816,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.69632e-05;MQSB=0.437286;RPB=0.89945;SGB=40.4492;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-142.SNP.5:2018313 chr05:002018313 0 W/2018313-2018313 FN-142 Single Base Substitution G-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN978-S.SNP.5:2022903 chr05:002022903 0 W/2022903-2022903 FN978-S Single Base Substitution A-G INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3758-S.SNP.5:2026318 chr05:002026318 0 W/2026318-2026318 FN3758-S SNP T -> A AC=1;AN=190;BQB=0.798981;DP=1786;DP4=811,789,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00279955;MQB=2.69614e-06;MQSB=1.21204e-07;RPB=0.999588;SGB=-35.8783;VDB=0.0153938;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.5:2026715 chr05:002026715 0 W/2026715-2026715 FN4075-S SNP G -> T AC=1;AN=182;BQB=0.5802;DP=2226;DP4=1312,862,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000655551;MQSB=1.55735e-06;RPB=0.19357;SGB=18.0739;VDB=0.888218;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.5:2026716 chr05:002026716 0 W/2026716-2026716 FN4075-S SNP G -> T AC=1;AN=182;BQB=0.917748;DP=2220;DP4=1309,837,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.72367e-05;MQSB=2.49824e-06;RPB=0.247217;SGB=30.5793;VDB=0.798217;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.5:2034097 chr05:002034097 0 W/2034097-2034097 FN-136 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g04420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3509-S.SNP.5:2045097 chr05:002045097 0 W/2045097-2045097 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.986549;DP=2975;DP4=1614,1296,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.07768e-11;MQSB=0.617642;RPB=0.666148;SGB=85.3253;VDB=0.720698;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V11|348|LOC_Os05g04440|protein_coding|CODING|LOC_Os05g04440.1|1|1) FN3396-S.SNP.5:2048550 chr05:002048550 0 W/2048550-2048550 FN3396-S SNP C -> T AC=1;AN=184;BQB=0.997399;DP=3272;DP4=1805,1376,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61326e-11;MQSB=0.912762;RPB=0.462589;SGB=53.3568;VDB=0.556921;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.5:2049877 chr05:002049877 0 W/2049877-2049877 FN687-S Single Base Substitution T-G INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN4130-S.SNP.5:2052959 chr05:002052959 0 W/2052959-2052959 FN4130-S SNP T -> G AC=1;AN=182;BQB=0.951181;DP=3071;DP4=1514,1494,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.49992e-07;MQSB=0.988045;RPB=0.937995;SGB=44.1115;VDB=0.566422;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.5:2053223 chr05:002053223 0 W/2053223-2053223 FN793-S Single Base Substitution G-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN462-S.SNP.5:2054779 chr05:002054779 0 W/2054779-2054779 FN462-S Single Base Substitution T-C INTRON HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3930-S.SNP.5:2054796 chr05:002054796 0 W/2054796-2054796 FN3930-S SNP A -> G AC=2;AN=158;BQB=0.972154;DP=2475;DP4=1156,1220,13,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.48868e-16;MQSB=0.835486;RPB=0.995798;SGB=81.2457;VDB=0.700643;EFF=INTRON(MODIFIER||||726|LOC_Os05g04460|protein_coding|CODING|LOC_Os05g04460.1|1|1) FN1233-S.SNP.5:2055275 chr05:002055275 0 W/2055275-2055275 FN1233-S Single Base Substitution A-C INTRON HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN4094-S.SNP.5:2068828 chr05:002068828 0 W/2068828-2068828 FN4094-S SNP G -> A AC=1;AN=182;BQB=0.557156;DP=3542;DP4=1465,1988,11,18;HOB=6.03792e-05;ICB=0.000121422;MQ=28;MQ0F=0.352343;MQB=0.320715;MQSB=0;RPB=0.0746914;SGB=91.8015;VDB=0.781591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R689W|965|LOC_Os05g04480|protein_coding|CODING|LOC_Os05g04480.1|1|1) FN417-S.SNP.5:2075555 chr05:002075555 0 W/2075555-2075555 FN417-S Single Base Substitution G-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2355.SNP.5:2113662 chr05:002113662 0 W/2113662-2113662 FN2355 SNP T -> G AC=1;AN=192;BQB=0.367409;DP=4629;DP4=2410,1995,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.58538e-10;MQSB=0.0628368;RPB=0.924531;SGB=99.4183;VDB=0.150549;EFF=UTR_3_PRIME(MODIFIER||157||454|LOC_Os05g04550|protein_coding|CODING|LOC_Os05g04550.1|12|1) FN901-S.SNP.5:2117431 chr05:002117431 0 W/2117431-2117431 FN901-S Single Base Substitution A-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN938-S.SNP.5:2128907 chr05:002128907 0 W/2128907-2128907 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN_822-5-1.SNP.5:2140981 chr05:002140981 0 W/2140981-2140981 FN_822-5-1 Single Base Substitution C-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN4229-S.SNP.5:2144616 chr05:002144616 0 W/2144616-2144616 FN4229-S SNP T -> C AC=2;AN=170;BQB=0.831943;DP=1879;DP4=890,913,10,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.33992e-13;MQSB=0.595332;RPB=0.588164;SGB=76.1898;VDB=0.726226;EFF=INTRON(MODIFIER||||436|LOC_Os05g04584|protein_coding|CODING|LOC_Os05g04584.1|1|1) FN4344-S.SNP.5:2147210 chr05:002147210 0 W/2147210-2147210 FN4344-S SNP T -> C AC=1;AN=170;BQB=0.974064;DP=2331;DP4=1050,1219,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.74876e-07;MQSB=0.965645;RPB=0.798603;SGB=24.5502;VDB=0.583965;EFF=INTRON(MODIFIER||||436|LOC_Os05g04584|protein_coding|CODING|LOC_Os05g04584.1|1|1) FN3513-S.SNP.5:2149254 chr05:002149254 0 W/2149254-2149254 FN3513-S SNP G -> A AC=2;AN=188;BQB=0.855305;DP=3325;DP4=1697,1543,7,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.2727e-13;MQSB=0.318897;RPB=0.692399;SGB=89.8686;VDB=0.918743;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E235|436|LOC_Os05g04584|protein_coding|CODING|LOC_Os05g04584.1|2|1) FN3658-S.SNP.5:2156990 chr05:002156990 0 W/2156990-2156990 FN3658-S SNP A -> C AC=2;AN=190;BQB=0.915785;DP=2807;DP4=1237,1486,5,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.4747e-08;MQSB=0.999889;RPB=0.980093;SGB=67.3108;VDB=0.212649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.5:2157761 chr05:002157761 0 W/2157761-2157761 FN2583-S SNP G -> C AC=1;AN=200;BQB=0.950631;DP=5035;DP4=2806,1884,16,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24877e-11;MQSB=0.775444;RPB=0.998371;SGB=37.3004;VDB=0.0121435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.5:2164657 chr05:002164657 0 W/2164657-2164657 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.122855;DP=3311;DP4=1546,1422,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.22149e-09;MQSB=0.975622;RPB=0.162655;SGB=-9.34484;VDB=0.966014;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.5:2165124 chr05:002165124 0 W/2165124-2165124 FN-121 Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-154.SNP.5:2168071 chr05:002168071 0 W/2168071-2168071 FN-154 Single Base Substitution T-C INTERGENIC HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN2752-S.SNP.5:2183428 chr05:002183428 0 W/2183428-2183428 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.861314;DP=5155;DP4=2570,2335,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84423e-11;MQSB=0.999852;RPB=0.707858;SGB=72.6852;VDB=0.61789;EFF=INTRON(MODIFIER||||502|LOC_Os05g04640|protein_coding|CODING|LOC_Os05g04640.1|3|1) FN1097-S.SNP.5:2199559 chr05:002199559 0 W/2199559-2199559 FN1097-S Single Base Substitution T-C INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2473.SNP.5:2207004 chr05:002207004 0 W/2207004-2207004 FN2473 SNP C -> T AC=2;AN=200;BQB=0.152358;DP=3942;DP4=2020,1675,14,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.84518e-11;MQSB=0.938233;RPB=0.983532;SGB=76.3213;VDB=0.471626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.5:2222201 chr05:002222201 0 W/2222201-2222201 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.985104;DP=3083;DP4=1636,1309,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92066e-07;MQSB=0.964123;RPB=0.81356;SGB=44.5415;VDB=0.393697;EFF=INTERGENIC(MODIFIER||||||||||1) FN1648-S.SNP.5:2238771 chr05:002238771 0 W/2238771-2238771 FN1648-S Single Base Substitution C-A INTERGENIC HET SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN1086-S.SNP.5:2240496 chr05:002240496 0 W/2240496-2240496 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1086-S.SNP.5:2240555 chr05:002240555 0 W/2240555-2240555 FN1086-S Single Base Substitution A-G INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2612-S.SNP.5:2245516 chr05:002245516 0 W/2245516-2245516 FN2612-S SNP T -> G AC=1;AN=198;BQB=0.998828;DP=4442;DP4=1914,2242,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47659e-09;MQSB=0.979658;RPB=0.909287;SGB=14.1348;VDB=0.240097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.5:2246249 chr05:002246249 0 W/2246249-2246249 FN3940-S SNP G -> A AC=2;AN=158;BQB=0.954626;DP=2006;DP4=831,1089,7,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.59486e-11;MQSB=0.962099;RPB=0.954918;SGB=33.2965;VDB=0.473334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.5:2251473 chr05:002251473 0 W/2251473-2251473 FN3893-S SNP G -> A AC=2;AN=158;BQB=0.906392;DP=2329;DP4=1040,1179,13,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.08078e-15;MQSB=0.834839;RPB=0.779443;SGB=81.2457;VDB=0.97334;EFF=UTR_3_PRIME(MODIFIER||188||399|LOC_Os05g04750|protein_coding|CODING|LOC_Os05g04750.1|2|1) FN2580-S.SNP.5:2257940 chr05:002257940 0 W/2257940-2257940 FN2580-S SNP C -> T AC=1;AN=198;BQB=0.224442;DP=4008;DP4=1971,1818,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00648703;MQB=0.00959163;MQSB=0.180054;RPB=0.428959;SGB=81.7147;VDB=0.485585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.5:2262967 chr05:002262967 0 W/2262967-2262967 FN2333 SNP C -> A AC=2;AN=192;BQB=0.984954;DP=4837;DP4=2274,2185,30,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.10636e-26;MQSB=0.42806;RPB=0.966559;SGB=-50.5756;VDB=0.90693;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.5:2264998 chr05:002264998 0 W/2264998-2264998 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.584388;DP=2872;DP4=1514,1269,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.51128e-08;MQSB=0.936083;RPB=0.572731;SGB=28.6195;VDB=0.210834;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.5:2277995 chr05:002277995 0 W/2277995-2277995 FN-288 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g04790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1033-S.SNP.5:2278000 chr05:002278000 0 W/2278000-2278000 FN1033-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g04790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN629-S.SNP.5:2279721 chr05:002279721 0 W/2279721-2279721 FN629-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3859-S.SNP.5:2280776 chr05:002280776 0 W/2280776-2280776 FN3859-S SNP C -> A AC=1;AN=158;BQB=0.715414;DP=2586;DP4=1442,942,6,11;HOB=8.01154e-05;ICB=0.000161245;MQ=24;MQ0F=0.258701;MQB=0.188708;MQSB=0;RPB=0.352428;SGB=26.1881;VDB=0.642126;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.5:2291310 chr05:002291310 0 W/2291310-2291310 FN561-S Single Base Substitution T-G INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN4047-S.SNP.5:2291763 chr05:002291763 0 W/2291763-2291763 FN4047-S SNP G -> A AC=1;AN=168;BQB=0.987905;DP=2242;DP4=1111,1049,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.37586e-05;MQSB=0.991404;RPB=0.972534;SGB=34.4498;VDB=0.375147;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.5:2299136 chr05:002299136 0 W/2299136-2299136 FN-346 Single Base Substitution G-C INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3779-S.SNP.5:2314506 chr05:002314506 0 W/2314506-2314506 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.478848;DP=3027;DP4=1389,1544,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.55385e-08;MQSB=0.950828;RPB=0.486585;SGB=28.7675;VDB=0.94061;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G290S|427|LOC_Os05g04820|protein_coding|CODING|LOC_Os05g04820.1|4|1) FN3821-S.SNP.5:2330387 chr05:002330387 0 W/2330387-2330387 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.743338;DP=2862;DP4=1427,1290,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33801e-09;MQSB=0.912431;RPB=0.867619;SGB=85.5263;VDB=0.699406;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.5:2341022 chr05:002341022 0 W/2341022-2341022 FN482-S Single Base Substitution G-T INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN462-S.SNP.5:2342873 chr05:002342873 0 W/2342873-2342873 FN462-S Single Base Substitution G-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN624-S.SNP.5:2346723 chr05:002346723 0 W/2346723-2346723 FN624-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2611-S.SNP.5:2350262 chr05:002350262 0 W/2350262-2350262 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.697602;DP=4739;DP4=2364,2133,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.15438e-11;MQSB=0.952245;RPB=0.85549;SGB=72.6852;VDB=0.419317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.5:2355605 chr05:002355605 0 W/2355605-2355605 FN2650-S SNP C -> A AC=1;AN=200;BQB=0.936823;DP=4910;DP4=2303,2323,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.41067e-17;MQSB=0.977947;RPB=0.513319;SGB=94.3471;VDB=0.586055;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.5:2356719 chr05:002356719 0 W/2356719-2356719 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1472-S.SNP.5:2362956 chr05:002362956 0 W/2362956-2362956 FN1472-S Single Base Substitution A-T INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN3559-S.SNP.5:2363551 chr05:002363551 0 W/2363551-2363551 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.998619;DP=2696;DP4=1395,1220,16,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.95163e-10;MQSB=0.874305;RPB=0.670409;SGB=76.2387;VDB=0.531381;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.5:2368620 chr05:002368620 0 W/2368620-2368620 FN-21 Single Base Substitution G-A INTRON Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN-61.SNP.5:2368620 chr05:002368620 0 W/2368620-2368620 FN-61 Single Base Substitution G-A INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2232-S.SNP.5:2368620 chr05:002368620 0 W/2368620-2368620 FN2232-S SNP G -> A AC=2;AN=190;BQB=0.532507;DP=5160;DP4=2558,2220,10,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.85361e-15;MQSB=0.995495;RPB=0.424934;SGB=117.403;VDB=0.34895;EFF=INTRON(MODIFIER||||940|LOC_Os05g04914|protein_coding|CODING|LOC_Os05g04914.1|1|1) W247-2-1.SNP.5:2368620 chr05:002368620 0 W/2368620-2368620 W247-2-1 Single Base Substitution G-A INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN_777-2-1.SNP.5:2377653 chr05:002377653 0 W/2377653-2377653 FN_777-2-1 Single Base Substitution T-C HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2407.SNP.5:2390137 chr05:002390137 0 W/2390137-2390137 FN2407 SNP C -> T AC=1;AN=200;BQB=0.91393;DP=4336;DP4=1952,2180,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.53371e-17;MQSB=0.999979;RPB=0.816789;SGB=23.9365;VDB=0.680626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.5:2390462 chr05:002390462 0 W/2390462-2390462 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.946608;DP=4458;DP4=1858,2267,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.19635e-06;MQSB=6.50072e-15;RPB=0.104102;SGB=51.0851;VDB=0.890816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.5:2392757 chr05:002392757 0 W/2392757-2392757 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.894157;DP=2652;DP4=1201,1334,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63422e-05;MQSB=0.996621;RPB=0.756999;SGB=39.699;VDB=0.794525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3937-S.SNP.5:2393919 chr05:002393919 0 W/2393919-2393919 FN3937-S SNP G -> A AC=1;AN=158;BQB=0.906615;DP=2568;DP4=1201,1227,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.50887e-06;MQSB=0.995355;RPB=0.887126;SGB=30.704;VDB=0.479045;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.5:2399744 chr05:002399744 0 W/2399744-2399744 FN443-S Single Base Substitution T-C INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2202-S.SNP.5:2402320 chr05:002402320 0 W/2402320-2402320 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.409647;DP=5068;DP4=2224,2348,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02019e-09;MQSB=0.849299;RPB=0.999944;SGB=-9.89872;VDB=0.895311;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.5:2403428 chr05:002403428 0 W/2403428-2403428 FN627-S Single Base Substitution A-T INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN1374-S.SNP.5:2405706 chr05:002405706 0 W/2405706-2405706 FN1374-S Single Base Substitution C-T INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3712-S.SNP.5:2407021 chr05:002407021 0 W/2407021-2407021 FN3712-S SNP A -> T AC=1;AN=190;BQB=0.640627;DP=5139;DP4=2575,2318,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.267951;MQB=0.00203357;MQSB=1.47473e-05;RPB=0.245947;SGB=68.0854;VDB=0.828249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q186H|811|LOC_Os05g04970|protein_coding|CODING|LOC_Os05g04970.1|1|1) FN4229-S.SNP.5:2425092 chr05:002425092 0 W/2425092-2425092 FN4229-S SNP G -> A AC=1;AN=170;BQB=0.759835;DP=3481;DP4=1927,1435,27,14;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.292157;MQB=3.79419e-06;MQSB=8.46459e-08;RPB=0.0124513;SGB=-686.589;VDB=0.414575;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q397|1991|LOC_Os05g05000|protein_coding|CODING|LOC_Os05g05000.1|1|1) FN3947-S.SNP.5:2431406 chr05:002431406 0 W/2431406-2431406 FN3947-S SNP G -> A AC=1;AN=168;BQB=0.752921;DP=2997;DP4=1406,1450,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.198866;MQB=0.405043;MQSB=0;RPB=0.560552;SGB=93.0718;VDB=0.0222119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R541C|831|LOC_Os05g05010|protein_coding|CODING|LOC_Os05g05010.1|4|1) FN2665-S.SNP.5:2439330 chr05:002439330 0 W/2439330-2439330 FN2665-S SNP A -> C AC=1;AN=200;BQB=0.311644;DP=4501;DP4=2163,2130,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07049e-17;MQSB=0.988397;RPB=0.687518;SGB=97.9523;VDB=0.456082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.5:2441925 chr05:002441925 0 W/2441925-2441925 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.108562;DP=4110;DP4=2112,1938,25,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3312e-10;MQSB=0.948835;RPB=0.584177;SGB=-274.986;VDB=0.81778;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.5:2447345 chr05:002447345 0 W/2447345-2447345 FN3637-S SNP A -> T AC=1;AN=190;BQB=0.919408;DP=2939;DP4=1484,1337,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7805e-11;MQSB=0.963905;RPB=0.990652;SGB=60.9777;VDB=0.156715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.5:2449685 chr05:002449685 0 W/2449685-2449685 FN1301-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g05030 expressed protein SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4082-S.SNP.5:2450662 chr05:002450662 0 W/2450662-2450662 FN4082-S SNP C -> T AC=2;AN=182;BQB=0.973643;DP=2847;DP4=1308,1384,15,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.40454e-23;MQSB=0.99122;RPB=0.512487;SGB=126.91;VDB=0.180436;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.5:2462207 chr05:002462207 0 W/2462207-2462207 FN3553-S SNP G -> T AC=2;AN=188;BQB=0.958425;DP=2773;DP4=1255,1431,19,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.51931e-25;MQSB=0.985797;RPB=0.939244;SGB=176.191;VDB=0.794545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.5:2473184 chr05:002473184 0 W/2473184-2473184 FN1048-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g05090 transposon protein, putative, unclassified, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN974-S.SNP.5:2473814 chr05:002473814 0 W/2473814-2473814 FN974-S Single Base Substitution T-C INTRON HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN2545-S.SNP.5:2474880 chr05:002474880 0 W/2474880-2474880 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.922159;DP=3847;DP4=1851,1805,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00389914;MQB=9.92755e-05;MQSB=0.0826476;RPB=0.350821;SGB=26.7492;VDB=0.60711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P455L|1037|LOC_Os05g05090|protein_coding|CODING|LOC_Os05g05090.1|3|1) FN2550-S.SNP.5:2483759 chr05:002483759 0 W/2483759-2483759 FN2550-S SNP A -> G AC=1;AN=198;BQB=0.530423;DP=4178;DP4=1938,2075,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000279989;MQSB=0.640017;RPB=0.878929;SGB=18.5788;VDB=0.764826;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.5:2490215 chr05:002490215 0 W/2490215-2490215 FN484-S Single Base Substitution G-T INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN1093-S.SNP.5:2494267 chr05:002494267 0 W/2494267-2494267 FN1093-S Single Base Substitution C-A INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2546-S.SNP.5:2494267 chr05:002494267 0 W/2494267-2494267 FN2546-S SNP C -> A AC=2;AN=198;BQB=0.898798;DP=4266;DP4=1670,2308,16,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.73693e-22;MQSB=0.897034;RPB=0.903348;SGB=115.647;VDB=0.891093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.5:2494267 chr05:002494267 0 W/2494267-2494267 FN3555-S SNP C -> A AC=2;AN=188;BQB=0.573201;DP=2731;DP4=1110,1495,17,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.74867e-21;MQSB=0.885878;RPB=0.393347;SGB=176.191;VDB=0.67774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.5:2494267 chr05:002494267 0 W/2494267-2494267 FN3665-S SNP C -> A AC=2;AN=190;BQB=0.955129;DP=2894;DP4=1151,1552,29,41;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.19392e-42;MQSB=0.992174;RPB=0.519357;SGB=268.131;VDB=0.990558;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.5:2494267 chr05:002494267 0 W/2494267-2494267 FN627-S Single Base Substitution C-A INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3722-S.SNP.5:2495431 chr05:002495431 0 W/2495431-2495431 FN3722-S SNP A -> C AC=1;AN=190;BQB=0.981612;DP=3370;DP4=1468,1718,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.59279e-10;MQSB=0.892464;RPB=0.98759;SGB=53.8699;VDB=0.402468;EFF=INTRON(MODIFIER||||273|LOC_Os05g05130|protein_coding|CODING|LOC_Os05g05130.1|1|1) FN2671-S.SNP.5:2495986 chr05:002495986 0 W/2495986-2495986 FN2671-S SNP T -> G AC=1;AN=200;BQB=0.605292;DP=4887;DP4=2280,2404,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42986e-06;MQSB=0.987677;RPB=0.844954;SGB=-17.3464;VDB=0.638963;EFF=INTRON(MODIFIER||||273|LOC_Os05g05130|protein_coding|CODING|LOC_Os05g05130.1|2|1) FN321-S.SNP.5:2499119 chr05:002499119 0 W/2499119-2499119 FN321-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g05130 GA20663-PA, putative, expressed SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1053-S.SNP.5:2510333 chr05:002510333 0 W/2510333-2510333 FN1053-S Single Base Substitution A-G INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN526-S.SNP.5:2510351 chr05:002510351 0 W/2510351-2510351 FN526-S Single Base Substitution A-G INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3363-S.SNP.5:2523450 chr05:002523450 0 W/2523450-2523450 FN3363-S SNP C -> G AC=1;AN=184;BQB=0.896473;DP=3569;DP4=1505,1953,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.42399e-09;MQSB=0.999705;RPB=0.287529;SGB=57.786;VDB=0.270585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R338S|429|LOC_Os05g05180|protein_coding|CODING|LOC_Os05g05180.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R511S|602|LOC_Os05g05180|protein_coding|CODING|LOC_Os05g05180.2|3|1) FN1170-S.SNP.5:2524597 chr05:002524597 0 W/2524597-2524597 FN1170-S Single Base Substitution G-A INTRON HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN4129-S.SNP.5:2526720 chr05:002526720 0 W/2526720-2526720 FN4129-S SNP A -> T AC=1;AN=182;BQB=0.945132;DP=2524;DP4=1231,1195,4,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000979936;MQSB=0.999935;RPB=0.880462;SGB=26.0691;VDB=0.262259;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.5:2533014 chr05:002533014 0 W/2533014-2533014 FN-397 Single Base Substitution T-A INTRON HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-397.SNP.5:2533016 chr05:002533016 0 W/2533016-2533016 FN-397 Single Base Substitution G-A INTRON HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN442-S.SNP.5:2537775 chr05:002537775 0 W/2537775-2537775 FN442-S Single Base Substitution T-C INTRON HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-23.SNP.5:2545199 chr05:002545199 0 W/2545199-2545199 FN-23 Single Base Substitution A-T SYNONYMOUS_CODING Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-23.SNP.5:2545200 chr05:002545200 0 W/2545200-2545200 FN-23 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os05g05220 glioma tumor suppressor candidate region gene 2 protein, putative, expressed SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN3677-S.SNP.5:2554112 chr05:002554112 0 W/2554112-2554112 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.94402;DP=2988;DP4=1432,1439,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77914e-10;MQSB=0.90731;RPB=0.339234;SGB=80.9724;VDB=0.145838;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L339|1128|LOC_Os05g05230|protein_coding|CODING|LOC_Os05g05230.1|6|1) FN-241.SNP.5:2564211 chr05:002564211 0 W/2564211-2564211 FN-241 Single Base Substitution T-C INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN343-S.SNP.5:2565146 chr05:002565146 0 W/2565146-2565146 FN343-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g05240 serine/threonine protein phosphatase, putative, expressed SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN560-S.SNP.5:2573175 chr05:002573175 0 W/2573175-2573175 FN560-S Single Base Substitution G-A INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3464-S.SNP.5:2577208 chr05:002577208 0 W/2577208-2577208 FN3464-S SNP T -> G AC=1;AN=184;BQB=0.681309;DP=2673;DP4=1367,1189,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.43012e-05;MQSB=0.996625;RPB=0.0185418;SGB=21.6609;VDB=0.347684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.5:2578163 chr05:002578163 0 W/2578163-2578163 FN2545-S SNP T -> C AC=1;AN=198;BQB=0.807004;DP=4984;DP4=2505,2206,13,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.3964e-09;MQSB=0.951433;RPB=0.863138;SGB=72.5245;VDB=0.104384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.5:2579053 chr05:002579053 0 W/2579053-2579053 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.948858;DP=2946;DP4=1221,1587,85,8;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0115411;MQB=0;MQSB=8.28583e-06;RPB=2.23502e-07;SGB=-1381.26;VDB=1.23538e-14;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.5:2592313 chr05:002592313 0 W/2592313-2592313 FN1675-S SNP A -> G AC=2;AN=188;BQB=0.369448;DP=3672;DP4=1521,2093,15,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.12596e-19;MQSB=0.987642;RPB=0.448988;SGB=-45.5852;VDB=0.662242;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.5:2600018 chr05:002600018 0 W/2600018-2600018 FN2340 SNP G -> A AC=2;AN=192;BQB=0.945879;DP=5039;DP4=2557,2226,14,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.34546e-19;MQSB=0.915689;RPB=0.970923;SGB=103.938;VDB=0.246529;EFF=INTRON(MODIFIER||||386|LOC_Os05g05280|protein_coding|CODING|LOC_Os05g05280.1|8|1) FN2340.SNP.5:2600019 chr05:002600019 0 W/2600019-2600019 FN2340 SNP A -> T AC=2;AN=192;BQB=0.978428;DP=5036;DP4=2490,2199,16,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.78488e-22;MQSB=0.987539;RPB=0.986204;SGB=33.9487;VDB=0.417096;EFF=INTRON(MODIFIER||||386|LOC_Os05g05280|protein_coding|CODING|LOC_Os05g05280.1|8|1) W470-2-1.SNP.5:2601687 chr05:002601687 0 W/2601687-2601687 W470-2-1 Single Base Substitution A-C INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN489-S.SNP.5:2601917 chr05:002601917 0 W/2601917-2601917 FN489-S Single Base Substitution A-G INTRON HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1410-S.SNP.5:2604852 chr05:002604852 0 W/2604852-2604852 FN1410-S Single Base Substitution A-T INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1461-S.SNP.5:2621550 chr05:002621550 0 W/2621550-2621550 FN1461-S Single Base Substitution A-T INTRON HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2593-S.SNP.5:2629932 chr05:002629932 0 W/2629932-2629932 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.982168;DP=4077;DP4=1900,1942,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.7712e-16;MQSB=0.359217;RPB=0.0423844;SGB=28.4908;VDB=0.271078;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R104|544|LOC_Os05g05330|protein_coding|CODING|LOC_Os05g05330.1|1|1) FN2751-S.SNP.5:2633433 chr05:002633433 0 W/2633433-2633433 FN2751-S SNP A -> C AC=1;AN=200;BQB=0.920632;DP=4803;DP4=2376,2240,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.05092e-06;MQSB=0.99987;RPB=0.00347514;SGB=35.8441;VDB=0.00242867;EFF=UTR_3_PRIME(MODIFIER||329||55|LOC_Os05g05346|protein_coding|CODING|LOC_Os05g05346.1|1|1) FN2221-S.SNP.5:2643426 chr05:002643426 0 W/2643426-2643426 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.224069;DP=4525;DP4=2189,2065,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000220994;MQB=4.21358e-12;MQSB=0.342903;RPB=0.956782;SGB=85.8548;VDB=0.782988;EFF=INTRON(MODIFIER||||614|LOC_Os05g05354|protein_coding|CODING|LOC_Os05g05354.1|5|1) FN412-S.SNP.5:2643733 chr05:002643733 0 W/2643733-2643733 FN412-S Single Base Substitution G-A INTRON HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN-393.SNP.5:2654491 chr05:002654491 0 W/2654491-2654491 FN-393 Single Base Substitution A-G INTRON HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN461-S.SNP.5:2661908 chr05:002661908 0 W/2661908-2661908 FN461-S Single Base Substitution G-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN2418.SNP.5:2663209 chr05:002663209 0 W/2663209-2663209 FN2418 SNP A -> G AC=1;AN=200;BQB=0.48689;DP=4522;DP4=2214,1941,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3246e-12;MQSB=0.988182;RPB=0.451603;SGB=65.5058;VDB=0.26618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:2664784 chr05:002664784 0 W/2664784-2664784 FN2639-S SNP A -> T AC=1;AN=200;BQB=0.990838;DP=5087;DP4=2371,2444,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73413e-19;MQSB=0.999998;RPB=0.645082;SGB=65.9573;VDB=0.179409;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.5:2672429 chr05:002672429 0 W/2672429-2672429 FN-107 Single Base Substitution C-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1115-S.SNP.5:2673888 chr05:002673888 0 W/2673888-2673888 FN1115-S Single Base Substitution T-C INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1652-S.SNP.5:2675978 chr05:002675978 0 W/2675978-2675978 FN1652-S Single Base Substitution T-C INTRON HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN4155-S.SNP.5:2680466 chr05:002680466 0 W/2680466-2680466 FN4155-S SNP C -> G AC=2;AN=170;BQB=0.998387;DP=2390;DP4=971,1362,5,13;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00376569;MQB=0.0612202;MQSB=0.795223;RPB=0.92112;SGB=74.528;VDB=0.376393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.5:2682603 chr05:002682603 0 W/2682603-2682603 FN3918-S SNP A -> G AC=1;AN=158;BQB=0.999997;DP=2569;DP4=1188,1269,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.50145e-06;MQSB=0.976699;RPB=0.567925;SGB=-2.02218;VDB=0.804268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1293-S.SNP.5:2690596 chr05:002690596 0 W/2690596-2690596 FN1293-S Single Base Substitution G-A STOP_GAINED HET LOC_Os05g05420 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN3326-S.SNP.5:2695628 chr05:002695628 0 W/2695628-2695628 FN3326-S SNP G -> A AC=1;AN=184;BQB=0.549419;DP=2935;DP4=1486,1359,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.155366;MQB=0.988603;MQSB=0;RPB=0.55059;SGB=39.2697;VDB=0.2043;EFF=INTRON(MODIFIER||||1644|LOC_Os05g05420|protein_coding|CODING|LOC_Os05g05420.1|2|1) FN1617-S.SNP.5:2699176 chr05:002699176 0 W/2699176-2699176 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1288-S.SNP.5:2699954 chr05:002699954 0 W/2699954-2699954 FN1288-S Single Base Substitution C-T INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3433-S.SNP.5:2709310 chr05:002709310 0 W/2709310-2709310 FN3433-S SNP C -> T AC=1;AN=184;BQB=0.991176;DP=2662;DP4=1374,1234,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2954e-05;MQSB=0.899581;RPB=0.295987;SGB=30.6558;VDB=0.259674;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E424|1464|LOC_Os05g05440|protein_coding|CODING|LOC_Os05g05440.1|3|1) FN-332.SNP.5:2716295 chr05:002716295 0 W/2716295-2716295 FN-332 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g05450 MA3 domain containing protein, expressed SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1596-S.SNP.5:2716820 chr05:002716820 0 W/2716820-2716820 FN1596-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1596-S.SNP.5:2716822 chr05:002716822 0 W/2716822-2716822 FN1596-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN3443-S.SNP.5:2736809 chr05:002736809 0 W/2736809-2736809 FN3443-S SNP G -> A AC=1;AN=184;BQB=0.980237;DP=2578;DP4=1036,1490,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.0029e-07;MQSB=0.821305;RPB=0.810012;SGB=32.2261;VDB=0.859771;EFF=UTR_3_PRIME(MODIFIER||775||591|LOC_Os05g05490|protein_coding|CODING|LOC_Os05g05490.1|2|1) FN2630-S.SNP.5:2746310 chr05:002746310 0 W/2746310-2746310 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.924797;DP=4591;DP4=2309,2026,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10584e-09;MQSB=0.977468;RPB=0.657249;SGB=7.88476;VDB=0.676684;EFF=INTRON(MODIFIER||||964|LOC_Os05g05520|protein_coding|CODING|LOC_Os05g05520.1|6|1) FN594-S.SNP.5:2747274 chr05:002747274 0 W/2747274-2747274 FN594-S Single Base Substitution C-T INTRON HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2723-S.SNP.5:2750587 chr05:002750587 0 W/2750587-2750587 FN2723-S SNP C -> A AC=1;AN=200;BQB=0.990618;DP=4177;DP4=1943,2058,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.81296e-09;MQSB=0.987969;RPB=0.780267;SGB=58.8698;VDB=0.450857;EFF=INTRON(MODIFIER||||89|LOC_Os05g05530|protein_coding|CODING|LOC_Os05g05530.1|4|1) FN2307.SNP.5:2755797 chr05:002755797 0 W/2755797-2755797 FN2307 SNP C -> A AC=2;AN=192;BQB=0.994161;DP=5456;DP4=2500,2620,42,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.44783e-37;MQSB=0.952542;RPB=0.597667;SGB=17.3992;VDB=0.0107958;EFF=INTRON(MODIFIER||||188|LOC_Os05g05550|protein_coding|CODING|LOC_Os05g05550.1|1|1) FN2355.SNP.5:2757370 chr05:002757370 0 W/2757370-2757370 FN2355 SNP A -> C AC=1;AN=192;BQB=0.087651;DP=4946;DP4=2424,2267,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01191e-13;MQSB=0.675254;RPB=0.183599;SGB=49.4287;VDB=0.00717507;EFF=INTRON(MODIFIER||||188|LOC_Os05g05550|protein_coding|CODING|LOC_Os05g05550.1|1|1) FN2563-S.SNP.5:2775830 chr05:002775830 0 W/2775830-2775830 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.817728;DP=3516;DP4=1727,1481,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.0129681;MQSB=1.85362e-06;RPB=0.730658;SGB=5.98864;VDB=0.685546;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.5:2781782 chr05:002781782 0 W/2781782-2781782 FN459-S Single Base Substitution A-T INTRON HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2241-S.SNP.5:2783108 chr05:002783108 0 W/2783108-2783108 FN2241-S SNP A -> G AC=1;AN=190;BQB=0.328864;DP=4472;DP4=2110,2026,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000223614;MQB=5.01433e-11;MQSB=0.90439;RPB=0.998267;SGB=53.8699;VDB=0.794806;EFF=INTRON(MODIFIER||||544|LOC_Os05g05590|protein_coding|CODING|LOC_Os05g05590.1|1|1) FN4229-S.SNP.5:2795501 chr05:002795501 0 W/2795501-2795501 FN4229-S SNP C -> T AC=2;AN=170;BQB=0.971922;DP=2168;DP4=979,1030,8,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.68245e-10;MQSB=0.977924;RPB=0.979714;SGB=52.0913;VDB=0.0249167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:2797305 chr05:002797305 0 W/2797305-2797305 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.106342;DP=3083;DP4=1672,1226,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.7579e-08;MQSB=0.393432;RPB=0.559392;SGB=43.7442;VDB=0.639928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D134G|199|LOC_Os05g05620|protein_coding|CODING|LOC_Os05g05620.1|3|1) FN1156-XA21.SNP.5:2803488 chr05:002803488 0 W/2803488-2803488 FN1156-XA21 Single Base Substitution C-A INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.5:2803489 chr05:002803489 0 W/2803489-2803489 FN1156-XA21 Single Base Substitution T-G INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN4052-S.SNP.5:2804230 chr05:002804230 0 W/2804230-2804230 FN4052-S SNP T -> A AC=1;AN=168;BQB=0.939397;DP=2617;DP4=959,1562,3,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57261e-13;MQSB=0.960969;RPB=0.416721;SGB=65.6253;VDB=0.893103;EFF=UTR_5_PRIME(MODIFIER||115||183|LOC_Os05g05640|protein_coding|CODING|LOC_Os05g05640.1|1|1) CW-631-3-1.SNP.5:2805418 chr05:002805418 0 W/2805418-2805418 CW-631-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2360.SNP.5:2810348 chr05:002810348 0 W/2810348-2810348 FN2360 SNP T -> A AC=2;AN=192;BQB=0.570799;DP=4308;DP4=1841,2162,15,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000232126;MQB=1.13422e-16;MQSB=0.151552;RPB=0.981377;SGB=62.2505;VDB=0.979053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.5:2828805 chr05:002828805 0 W/2828805-2828805 FN2596-S SNP C -> A AC=1;AN=198;BQB=0.938385;DP=4098;DP4=2006,1847,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42451e-07;MQSB=0.927364;RPB=0.999131;SGB=4.56404;VDB=0.634553;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.5:2829783 chr05:002829783 0 W/2829783-2829783 FN947-S Single Base Substitution G-A INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN2550-S.SNP.5:2830319 chr05:002830319 0 W/2830319-2830319 FN2550-S SNP C -> G AC=1;AN=198;BQB=0.450608;DP=4192;DP4=2151,1820,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.92151e-05;MQSB=0.846586;RPB=0.220151;SGB=25.7687;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.5:2844544 chr05:002844544 0 W/2844544-2844544 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.976583;DP=2346;DP4=959,1310,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23081e-05;MQSB=0.930934;RPB=0.672518;SGB=38.987;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.5:2846432 chr05:002846432 0 W/2846432-2846432 W252-6-1 Single Base Substitution T-G INTRON HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN-397.SNP.5:2862804 chr05:002862804 0 W/2862804-2862804 FN-397 Single Base Substitution G-T UTR_3_PRIME HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1205-S.SNP.5:2867595 chr05:002867595 0 W/2867595-2867595 FN1205-S Single Base Substitution C-T INTRON HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3464-S.SNP.5:2894914 chr05:002894914 0 W/2894914-2894914 FN3464-S SNP C -> A AC=1;AN=184;BQB=0.954592;DP=2535;DP4=1253,1237,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14111e-05;MQSB=0.83467;RPB=0.940418;SGB=25.1826;VDB=0.123955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A270S|594|LOC_Os05g05800|protein_coding|CODING|LOC_Os05g05800.1|2|1) FN-275.SNP.5:2899947 chr05:002899947 0 W/2899947-2899947 FN-275 Single Base Substitution T-C INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3946-S.SNP.5:2900895 chr05:002900895 0 W/2900895-2900895 FN3946-S SNP T -> C AC=1;AN=168;BQB=0.652953;DP=2613;DP4=1051,1404,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.245e-08;MQSB=0.996757;RPB=0.683153;SGB=34.748;VDB=0.0754306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1190-S.SNP.5:2900965 chr05:002900965 0 W/2900965-2900965 FN1190-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN4160-S.SNP.5:2904740 chr05:002904740 0 W/2904740-2904740 FN4160-S SNP A -> T AC=1;AN=170;BQB=0.998773;DP=2253;DP4=1052,1145,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.53e-06;MQSB=0.980986;RPB=0.985626;SGB=21.1076;VDB=0.841751;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.5:2909871 chr05:002909871 0 W/2909871-2909871 FN4011-S SNP A -> G AC=1;AN=168;BQB=0.869789;DP=2699;DP4=1221,1307,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.36783e-09;MQSB=0.988673;RPB=0.997103;SGB=27.0464;VDB=0.888928;EFF=INTRON(MODIFIER||||872|LOC_Os05g05810|protein_coding|CODING|LOC_Os05g05810.1|8|1),INTRON(MODIFIER||||844|LOC_Os05g05810|protein_coding|CODING|LOC_Os05g05810.2|7|1) FN351-S.SNP.5:2919403 chr05:002919403 0 W/2919403-2919403 FN351-S Single Base Substitution A-G INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN-307.SNP.5:2924670 chr05:002924670 0 W/2924670-2924670 FN-307 Single Base Substitution G-T INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN4184-S.SNP.5:2925805 chr05:002925805 0 W/2925805-2925805 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.970791;DP=3087;DP4=1442,1491,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53695e-09;MQSB=0.657862;RPB=0.886557;SGB=74.528;VDB=0.521408;EFF=UTR_5_PRIME(MODIFIER||87||292|LOC_Os05g05830|protein_coding|CODING|LOC_Os05g05830.1|1|1),UTR_5_PRIME(MODIFIER||87||224|LOC_Os05g05830|protein_coding|CODING|LOC_Os05g05830.2|1|1) FN4152-S.SNP.5:2929756 chr05:002929756 0 W/2929756-2929756 FN4152-S SNP G -> A AC=2;AN=170;BQB=0.737768;DP=2716;DP4=1323,1311,17,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.38532e-19;MQSB=0.975229;RPB=0.916708;SGB=154.496;VDB=0.948985;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I584|885|LOC_Os05g05840|protein_coding|CODING|LOC_Os05g05840.1|3|1) FN4052-S.SNP.5:2931766 chr05:002931766 0 W/2931766-2931766 FN4052-S SNP G -> T AC=1;AN=168;BQB=0.940387;DP=2194;DP4=1046,1039,17,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.83655e-11;MQSB=0.877829;RPB=0.908296;SGB=44.0621;VDB=0.953644;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R47|885|LOC_Os05g05840|protein_coding|CODING|LOC_Os05g05840.1|1|1) FN1582-S.SNP.5:2945821 chr05:002945821 0 W/2945821-2945821 FN1582-S Single Base Substitution C-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN2264-S.SNP.5:2953001 chr05:002953001 0 W/2953001-2953001 FN2264-S SNP A -> T AC=1;AN=190;BQB=0.614005;DP=4651;DP4=2164,2074,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13301e-09;MQSB=0.382866;RPB=0.58717;SGB=46.7622;VDB=0.0459823;EFF=UTR_5_PRIME(MODIFIER||1296||434|LOC_Os05g05880|protein_coding|CODING|LOC_Os05g05880.1|1|1) FN435-S.SNP.5:2961485 chr05:002961485 0 W/2961485-2961485 FN435-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g05890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1015-S.SNP.5:2962415 chr05:002962415 0 W/2962415-2962415 FN1015-S Single Base Substitution G-A STOP_GAINED HET LOC_Os05g05890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3935-S.SNP.5:2971036 chr05:002971036 0 W/2971036-2971036 FN3935-S SNP T -> C AC=1;AN=158;BQB=0.967409;DP=2440;DP4=987,1316,7,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.4929e-10;MQSB=0.690642;RPB=0.79693;SGB=35.6659;VDB=0.933763;EFF=UTR_3_PRIME(MODIFIER||131||253|LOC_Os05g05940|protein_coding|CODING|LOC_Os05g05940.1|3|1) FN585-S.SNP.5:2972347 chr05:002972347 0 W/2972347-2972347 FN585-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN2126-S.SNP.5:2972962 chr05:002972962 0 W/2972962-2972962 FN2126-S SNP C -> A AC=1;AN=168;BQB=0.102369;DP=2426;DP4=1092,1222,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.43302e-11;MQSB=0.935785;RPB=0.880756;SGB=-12.7876;VDB=0.24328;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.5:2973363 chr05:002973363 0 W/2973363-2973363 FN-166 Single Base Substitution C-T INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-256.SNP.5:2975462 chr05:002975462 0 W/2975462-2975462 FN-256 Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN803-S.SNP.5:2977427 chr05:002977427 0 W/2977427-2977427 FN803-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g05950 TOC159, putative, expressed SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN-332.SNP.5:2981173 chr05:002981173 0 W/2981173-2981173 FN-332 Single Base Substitution T-A INTERGENIC HOMO SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2118-S.SNP.5:2982108 chr05:002982108 0 W/2982108-2982108 FN2118-S SNP C -> T AC=2;AN=168;BQB=0.657425;DP=3807;DP4=1609,2123,26,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.18622e-26;MQSB=0.000346398;RPB=0.947591;SGB=109.694;VDB=0.214228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.5:2987508 chr05:002987508 0 W/2987508-2987508 FN1660-S Single Base Substitution C-A INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1519-S.SNP.5:3009658 chr05:003009658 0 W/3009658-3009658 FN1519-S Single Base Substitution A-T INTRON HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3557-S.SNP.5:3013116 chr05:003013116 0 W/3013116-3013116 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.927086;DP=3310;DP4=1338,1876,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06937e-07;MQSB=0.992706;RPB=0.999849;SGB=39.5276;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.5:3016699 chr05:003016699 0 W/3016699-3016699 FN3309-S SNP T -> A AC=1;AN=184;BQB=0.985443;DP=3483;DP4=1703,1489,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.22909e-07;MQSB=1.04688e-09;RPB=0.882172;SGB=-37.1868;VDB=0.874435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2258-S.SNP.5:3016990 chr05:003016990 0 W/3016990-3016990 FN2258-S SNP G -> A AC=2;AN=190;BQB=0.0860808;DP=2316;DP4=937,959,11,21;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000431779;MQB=2.00015e-08;MQSB=0.0515874;RPB=0.0454879;SGB=54.431;VDB=0.739663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.5:3024378 chr05:003024378 0 W/3024378-3024378 FN1273-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN3056-S.SNP.5:3028481 chr05:003028481 0 W/3028481-3028481 FN3056-S SNP G -> A AC=1;AN=184;BQB=0.780713;DP=4103;DP4=2180,1764,19,16;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.153059;MQB=0.282439;MQSB=0;RPB=0.369846;SGB=152.744;VDB=0.357015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.5:3035781 chr05:003035781 0 W/3035781-3035781 FN1476-S Single Base Substitution G-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN544-S.SNP.5:3040861 chr05:003040861 0 W/3040861-3040861 FN544-S Single Base Substitution T-C INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN-28.SNP.5:3044027 chr05:003044027 0 W/3044027-3044027 FN-28 Single Base Substitution C-T INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN3542-S.SNP.5:3045286 chr05:003045286 0 W/3045286-3045286 FN3542-S SNP T -> C AC=1;AN=188;BQB=0.948815;DP=3025;DP4=1679,1223,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10243e-08;MQSB=0.837033;RPB=0.99698;SGB=0.908326;VDB=0.393131;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.5:3062340 chr05:003062340 0 W/3062340-3062340 FN581-S Single Base Substitution G-C INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3945-S.SNP.5:3067819 chr05:003067819 0 W/3067819-3067819 FN3945-S SNP G -> A AC=1;AN=168;BQB=0.233328;DP=2936;DP4=1636,1124,16,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.87158e-07;MQSB=0.935921;RPB=0.550081;SGB=-87.7854;VDB=0.12166;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.5:3074282 chr05:003074282 0 W/3074282-3074282 FN526-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1761-S.SNP.5:3079607 chr05:003079607 0 W/3079607-3079607 FN1761-S SNP A -> T AC=2;AN=188;BQB=0.997791;DP=3875;DP4=1797,2015,17,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.02504e-12;MQSB=0.971816;RPB=0.418342;SGB=-111.008;VDB=0.654658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.5:3092641 chr05:003092641 0 W/3092641-3092641 FN2417 SNP C -> A AC=1;AN=200;BQB=0.683617;DP=4900;DP4=2458,2168,14,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=5.59217e-11;MQSB=0.762991;RPB=0.871111;SGB=50.3263;VDB=0.228031;EFF=INTRON(MODIFIER||||201|LOC_Os05g06160|protein_coding|CODING|LOC_Os05g06160.1|1|1) FN-307.SNP.5:3094406 chr05:003094406 0 W/3094406-3094406 FN-307 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g06160 trehalose phosphatase, putative, expressed SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1655-S.SNP.5:3097057 chr05:003097057 0 W/3097057-3097057 FN1655-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2268-S.SNP.5:3097518 chr05:003097518 0 W/3097518-3097518 FN2268-S SNP T -> A AC=1;AN=190;BQB=0.858188;DP=4496;DP4=1651,2226,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=2.35577e-05;MQSB=0.962508;RPB=0.998391;SGB=-57.4269;VDB=0.593184;EFF=INTRON(MODIFIER||||313|LOC_Os05g06170|protein_coding|CODING|LOC_Os05g06170.1|5|1) FN2461.SNP.5:3099347 chr05:003099347 0 W/3099347-3099347 FN2461 SNP G -> A AC=1;AN=200;BQB=0.725716;DP=3957;DP4=2588,1079,12,5;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00530705;MQB=2.32269e-05;MQSB=0.648912;RPB=0.88761;SGB=7.88476;VDB=0.203378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.5:3100754 chr05:003100754 0 W/3100754-3100754 FN3293-S SNP T -> C AC=1;AN=184;BQB=0.998397;DP=3026;DP4=1353,1535,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.00581513;MQSB=9.20874e-05;RPB=0.978262;SGB=53.3568;VDB=0.94637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.5:3108931 chr05:003108931 0 W/3108931-3108931 FN3462-S SNP C -> G AC=2;AN=184;BQB=0.997567;DP=2344;DP4=1223,995,9,8;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0;MQB=1.67633e-09;MQSB=0.941376;RPB=0.589291;SGB=49.835;VDB=0.173618;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.5:3122892 chr05:003122892 0 W/3122892-3122892 FN399-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN952-S.SNP.5:3129505 chr05:003129505 0 W/3129505-3129505 FN952-S Single Base Substitution C-T INTERGENIC HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2450.SNP.5:3131884 chr05:003131884 0 W/3131884-3131884 FN2450 SNP A -> T AC=1;AN=200;BQB=0.962353;DP=4813;DP4=2239,2300,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64981e-14;MQSB=0.712634;RPB=0.596937;SGB=-7.6637;VDB=0.711865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.5:3136765 chr05:003136765 0 W/3136765-3136765 FN1422-S Single Base Substitution G-A INTERGENIC Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3833-S.SNP.5:3138424 chr05:003138424 0 W/3138424-3138424 FN3833-S SNP T -> C AC=1;AN=190;BQB=0.966291;DP=2537;DP4=1234,1212,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.70503e-06;MQSB=0.863628;RPB=0.790938;SGB=58.2031;VDB=0.504048;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.5:3144309 chr05:003144309 0 W/3144309-3144309 W466-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2122-S.SNP.5:3149560 chr05:003149560 0 W/3149560-3149560 FN2122-S SNP T -> G AC=2;AN=168;BQB=0.0986116;DP=2914;DP4=1741,1136,22,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.22042e-11;MQSB=0.396489;RPB=0.895182;SGB=-43.4892;VDB=0.861286;EFF=INTERGENIC(MODIFIER||||||||||1) W427-1-1.SNP.5:3164966 chr05:003164966 0 W/3164966-3164966 W427-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2795-S.SNP.5:3177772 chr05:003177772 0 W/3177772-3177772 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.850266;DP=3839;DP4=1910,1736,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.04386e-10;MQSB=0.974067;RPB=0.527118;SGB=77.1196;VDB=0.859734;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.5:3179188 chr05:003179188 0 W/3179188-3179188 FN549-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g06250 expressed protein SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN_N2-29a-1.SNP.5:3189351 chr05:003189351 0 W/3189351-3189351 FN_N2-29a-1 Single Base Substitution T-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN1336-S.SNP.5:3195801 chr05:003195801 0 W/3195801-3195801 FN1336-S Single Base Substitution A-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3282-S.SNP.5:3199206 chr05:003199206 0 W/3199206-3199206 FN3282-S SNP T -> C AC=1;AN=184;BQB=0.976102;DP=2879;DP4=1438,1353,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=9.287e-05;MQSB=0.775793;RPB=0.792367;SGB=28.7043;VDB=0.276117;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.5:3213034 chr05:003213034 0 W/3213034-3213034 FN-188 Single Base Substitution C-T INTRON HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2415.SNP.5:3215983 chr05:003215983 0 W/3215983-3215983 FN2415 SNP T -> C AC=1;AN=200;BQB=0.494495;DP=4130;DP4=2013,1538,22,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.31323e-16;MQSB=0.966048;RPB=0.673709;SGB=-80.6278;VDB=0.207374;EFF=INTRON(MODIFIER||||146|LOC_Os05g06290|protein_coding|CODING|LOC_Os05g06290.1|1|1) FN2540-S.SNP.5:3216183 chr05:003216183 0 W/3216183-3216183 FN2540-S SNP G -> T AC=1;AN=198;BQB=0.201985;DP=3852;DP4=1855,1740,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.18807e-10;MQSB=0.936585;RPB=0.222571;SGB=63.3342;VDB=0.331024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D30E|146|LOC_Os05g06290|protein_coding|CODING|LOC_Os05g06290.1|1|1) FN1219-S.SNP.5:3217399 chr05:003217399 0 W/3217399-3217399 FN1219-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2431.SNP.5:3228992 chr05:003228992 0 W/3228992-3228992 FN2431 SNP T -> A AC=2;AN=200;BQB=0.947662;DP=5170;DP4=2474,2475,16,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.77012e-13;MQSB=0.999071;RPB=0.971585;SGB=55.5366;VDB=0.775529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.5:3230253 chr05:003230253 0 W/3230253-3230253 FN2234-S SNP C -> G AC=1;AN=190;BQB=0.808561;DP=3808;DP4=1721,1898,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000262605;MQB=0.00323483;MQSB=4.49029e-07;RPB=0.992683;SGB=10.8904;VDB=0.536205;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.5:3230677 chr05:003230677 0 W/3230677-3230677 FN3484-S SNP G -> T AC=1;AN=184;BQB=0.999427;DP=3555;DP4=1336,2104,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000281294;MQB=1.17646e-09;MQSB=0.861912;RPB=0.779506;SGB=71.3514;VDB=0.241586;EFF=INTRON(MODIFIER||||188|LOC_Os05g06310|protein_coding|CODING|LOC_Os05g06310.1|2|1) FN722-S.SNP.5:3231761 chr05:003231761 0 W/3231761-3231761 FN722-S Single Base Substitution C-G INTRON HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN1026-S.SNP.5:3232795 chr05:003232795 0 W/3232795-3232795 FN1026-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. W443-5-1-3.SNP.5:3252864 chr05:003252864 0 W/3252864-3252864 W443-5-1-3 Single Base Substitution T-C INTRON HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3677-S.SNP.5:3253811 chr05:003253811 0 W/3253811-3253811 FN3677-S SNP A -> C AC=1;AN=190;BQB=0.998869;DP=3005;DP4=1322,1594,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.13472e-10;MQSB=0.983612;RPB=0.994685;SGB=43.2083;VDB=0.448688;EFF=INTRON(MODIFIER||||534|LOC_Os05g06350|protein_coding|CODING|LOC_Os05g06350.1|7|1) FN487-S.SNP.5:3258348 chr05:003258348 0 W/3258348-3258348 FN487-S Single Base Substitution A-G INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN745-S.SNP.5:3258516 chr05:003258516 0 W/3258516-3258516 FN745-S Single Base Substitution A-T INTRON HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2582-S.SNP.5:3265139 chr05:003265139 0 W/3265139-3265139 FN2582-S SNP A -> T AC=1;AN=198;BQB=0.97629;DP=4437;DP4=2225,2025,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.79834e-09;MQSB=0.999738;RPB=0.198151;SGB=7.75428;VDB=0.00741139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.5:3266534 chr05:003266534 0 W/3266534-3266534 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.941306;DP=1685;DP4=778,720,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.00413099;MQSB=0.0629101;RPB=0.984541;SGB=25.5891;VDB=0.941126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.5:3268958 chr05:003268958 0 W/3268958-3268958 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.607045;DP=2724;DP4=1253,1356,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34024e-07;MQSB=0.980781;RPB=0.188831;SGB=36.1006;VDB=0.0639288;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.5:3270344 chr05:003270344 0 W/3270344-3270344 FN1366-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1366-S.SNP.5:3271068 chr05:003271068 0 W/3271068-3271068 FN1366-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3505-S.SNP.5:3274450 chr05:003274450 0 W/3274450-3274450 FN3505-S SNP A -> T AC=1;AN=188;BQB=0.991268;DP=3144;DP4=1685,1362,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00381679;MQB=0.000280747;MQSB=5.21593e-23;RPB=0.961773;SGB=53.5223;VDB=0.550846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L1192F|1936|LOC_Os05g06390|protein_coding|CODING|LOC_Os05g06390.1|3|1) FN2539-S.SNP.5:3286775 chr05:003286775 0 W/3286775-3286775 FN2539-S SNP G -> A AC=1;AN=198;BQB=0.974261;DP=4866;DP4=2745,1896,16,17;HOB=5.10152e-05;ICB=0.000102546;MQ=20;MQ0F=0.233457;MQB=0.356613;MQSB=0;RPB=0.46273;SGB=70.8662;VDB=0.395091;EFF=INTRON(MODIFIER||||144|LOC_Os05g06399|protein_coding|CODING|LOC_Os05g06399.1|3|1) FN_949-1.SNP.5:3290220 chr05:003290220 0 W/3290220-3290220 FN_949-1 Single Base Substitution G-A Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN2083-S.SNP.5:3304647 chr05:003304647 0 W/3304647-3304647 FN2083-S SNP A -> G AC=2;AN=168;BQB=0.378759;DP=3502;DP4=1776,1661,30,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.50407e-31;MQSB=0.992734;RPB=0.366659;SGB=0.99852;VDB=0.0569889;EFF=INTRON(MODIFIER||||347|LOC_Os05g06440|protein_coding|CODING|LOC_Os05g06440.1|3|1) FN3342-S.SNP.5:3307751 chr05:003307751 0 W/3307751-3307751 FN3342-S SNP T -> G AC=2;AN=184;BQB=0.8896;DP=3033;DP4=1471,1465,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.77981e-15;MQSB=0.877207;RPB=0.931682;SGB=121.091;VDB=0.307584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.5:3308318 chr05:003308318 0 W/3308318-3308318 FN2373 SNP T -> C AC=1;AN=192;BQB=0.871498;DP=4941;DP4=2264,2370,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000202388;MQB=5.55678e-05;MQSB=0.94941;RPB=0.599153;SGB=29.087;VDB=0.406086;EFF=UTR_3_PRIME(MODIFIER||483||469|LOC_Os05g06450|protein_coding|CODING|LOC_Os05g06450.1|12|1),UTR_3_PRIME(MODIFIER||483||469|LOC_Os05g06450|protein_coding|CODING|LOC_Os05g06450.2|11|1) FN2483.SNP.5:3310492 chr05:003310492 0 W/3310492-3310492 FN2483 SNP G -> C AC=1;AN=200;BQB=0.276748;DP=4686;DP4=2203,2273,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19106e-08;MQSB=0.962293;RPB=0.569298;SGB=33.0593;VDB=0.97047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S239R|469|LOC_Os05g06450|protein_coding|CODING|LOC_Os05g06450.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S239R|469|LOC_Os05g06450|protein_coding|CODING|LOC_Os05g06450.2|4|1) FN2734-S.SNP.5:3321820 chr05:003321820 0 W/3321820-3321820 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.705705;DP=4742;DP4=2081,2417,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89055e-14;MQSB=0.991859;RPB=0.948275;SGB=42.5108;VDB=0.156425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.5:3329350 chr05:003329350 0 W/3329350-3329350 FN2577-S SNP G -> T AC=1;AN=198;BQB=0.967903;DP=3480;DP4=1778,1569,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.82796e-08;MQSB=0.97482;RPB=0.921304;SGB=58.7391;VDB=0.866283;EFF=INTRON(MODIFIER||||539|LOC_Os05g06470|protein_coding|CODING|LOC_Os05g06470.1|12|1) FN825-S.SNP.5:3333516 chr05:003333516 0 W/3333516-3333516 FN825-S Single Base Substitution C-T INTRON HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1493-S.SNP.5:3333524 chr05:003333524 0 W/3333524-3333524 FN1493-S Single Base Substitution G-T INTRON Homo SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN825-S.SNP.5:3333525 chr05:003333525 0 W/3333525-3333525 FN825-S Single Base Substitution T-C INTRON HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN4140-S.SNP.5:3354739 chr05:003354739 0 W/3354739-3354739 FN4140-S SNP G -> T AC=1;AN=170;BQB=0.274821;DP=2534;DP4=1336,1092,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.82346e-06;MQSB=0.989181;RPB=0.10283;SGB=27.9928;VDB=0.935526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1626-S.SNP.5:3357585 chr05:003357585 0 W/3357585-3357585 FN1626-S SNP G -> T AC=1;AN=188;BQB=0.0553784;DP=1747;DP4=544,1144,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00406798;MQSB=0.489321;RPB=0.994645;SGB=-35.081;VDB=0.988725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.5:3367774 chr05:003367774 0 W/3367774-3367774 FN3970-S SNP T -> C AC=1;AN=168;BQB=0.933478;DP=2980;DP4=1534,1333,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.66129e-10;MQSB=0.907796;RPB=0.431481;SGB=45.0404;VDB=0.0442613;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.5:3368999 chr05:003368999 0 W/3368999-3368999 FN3854-S SNP A -> C AC=1;AN=156;BQB=0.91956;DP=2455;DP4=1165,1170,8,2;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=3.45205e-06;MQSB=0.852507;RPB=0.991419;SGB=38.3284;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.5:3380647 chr05:003380647 0 W/3380647-3380647 FN4040-S SNP G -> T AC=2;AN=168;BQB=0.999981;DP=2779;DP4=1452,1154,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.72648e-13;MQSB=0.940081;RPB=0.394261;SGB=75.9177;VDB=0.881283;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.5:3387949 chr05:003387949 0 W/3387949-3387949 W470-2-1 Single Base Substitution T-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN568-S.SNP.5:3396895 chr05:003396895 0 W/3396895-3396895 FN568-S Single Base Substitution T-G INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN-263.SNP.5:3399798 chr05:003399798 0 W/3399798-3399798 FN-263 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN927-S.SNP.5:3400591 chr05:003400591 0 W/3400591-3400591 FN927-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN714-S.SNP.5:3402769 chr05:003402769 0 W/3402769-3402769 FN714-S Single Base Substitution T-C INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3723-S.SNP.5:3405722 chr05:003405722 0 W/3405722-3405722 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.965013;DP=2862;DP4=1339,1416,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.86523e-06;MQSB=0.948827;RPB=0.999957;SGB=44.5415;VDB=0.113566;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q285|744|LOC_Os05g06590|protein_coding|CODING|LOC_Os05g06590.1|1|1) FN988-S.SNP.5:3409515 chr05:003409515 0 W/3409515-3409515 FN988-S Single Base Substitution G-A INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3716-S.SNP.5:3414164 chr05:003414164 0 W/3414164-3414164 FN3716-S SNP T -> A AC=2;AN=190;BQB=0.971473;DP=2910;DP4=1426,1371,5,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00756014;MQB=0.000334637;MQSB=0.414415;RPB=0.984072;SGB=85.5263;VDB=0.296815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N720K|1377|LOC_Os05g06610|protein_coding|CODING|LOC_Os05g06610.1|2|1) FN-345.SNP.5:3415147 chr05:003415147 0 W/3415147-3415147 FN-345 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g06610 retrotransposon protein, putative, unclassified, expressed SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3926-S.SNP.5:3419811 chr05:003419811 0 W/3419811-3419811 FN3926-S SNP G -> A AC=2;AN=158;BQB=0.988055;DP=2540;DP4=1132,1271,28,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.4504e-31;MQSB=0.998374;RPB=0.532923;SGB=242.704;VDB=0.688868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.5:3426242 chr05:003426242 0 W/3426242-3426242 FN3776-S SNP T -> C AC=1;AN=190;BQB=0.998857;DP=2777;DP4=1356,1304,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.48918e-12;MQSB=0.00237938;RPB=0.977251;SGB=68.0854;VDB=0.293834;EFF=INTRON(MODIFIER||||470|LOC_Os05g06630|protein_coding|CODING|LOC_Os05g06630.1|3|1) FN2673-S.SNP.5:3434030 chr05:003434030 0 W/3434030-3434030 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.375034;DP=4562;DP4=1990,1954,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17389e-09;MQSB=0.111996;RPB=0.647954;SGB=-85.7004;VDB=0.0569933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.5:3436964 chr05:003436964 0 W/3436964-3436964 FN1429-S Single Base Substitution T-C INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1324-S.SNP.5:3444515 chr05:003444515 0 W/3444515-3444515 FN1324-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1685-S.SNP.5:3444666 chr05:003444666 0 W/3444666-3444666 FN1685-S SNP T -> C AC=1;AN=188;BQB=0.220706;DP=3814;DP4=1618,2153,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58325e-14;MQSB=0.956075;RPB=0.99903;SGB=-42.845;VDB=0.73071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.5:3457616 chr05:003457616 0 W/3457616-3457616 FN3890-S SNP T -> C AC=1;AN=158;BQB=0.905619;DP=2113;DP4=998,1029,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.87313e-08;MQSB=0.952361;RPB=0.993472;SGB=37.4429;VDB=0.95063;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.5:3462688 chr05:003462688 0 W/3462688-3462688 FN2230-S SNP C -> T AC=1;AN=190;BQB=0.992076;DP=4799;DP4=2277,2204,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26917e-13;MQSB=0.999735;RPB=0.257646;SGB=21.2038;VDB=0.433648;EFF=INTRON(MODIFIER||||382|LOC_Os05g06670|protein_coding|CODING|LOC_Os05g06670.1|1|1) FN-285.SNP.5:3464686 chr05:003464686 0 W/3464686-3464686 FN-285 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1136-19-S.SNP.5:3469450 chr05:003469450 0 W/3469450-3469450 FN1136-19-S Single Base Substitution G-A INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1665-S.SNP.5:3471914 chr05:003471914 0 W/3471914-3471914 FN1665-S Single Base Substitution A-T INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN534-S.SNP.5:3477989 chr05:003477989 0 W/3477989-3477989 FN534-S Single Base Substitution C-G INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3880-S.SNP.5:3479187 chr05:003479187 0 W/3479187-3479187 FN3880-S SNP T -> G AC=1;AN=158;BQB=0.876223;DP=2585;DP4=1251,1252,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.35446e-08;MQSB=0.985193;RPB=0.985416;SGB=68.9144;VDB=0.345221;EFF=INTRON(MODIFIER||||1030|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.1|16|1),INTRON(MODIFIER||||1030|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.2|15|1),INTRON(MODIFIER||||961|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.3|16|1) FN3828-S.SNP.5:3482196 chr05:003482196 0 W/3482196-3482196 FN3828-S SNP G -> C AC=1;AN=190;BQB=0.490909;DP=2696;DP4=1432,1177,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.74078e-05;MQSB=0.981646;RPB=0.710938;SGB=32.5467;VDB=0.394296;EFF=INTRON(MODIFIER||||1030|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.1|22|1),INTRON(MODIFIER||||1030|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.2|21|1),INTRON(MODIFIER||||961|LOC_Os05g06690|protein_coding|CODING|LOC_Os05g06690.3|22|1) FN3681-S.SNP.5:3485984 chr05:003485984 0 W/3485984-3485984 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.90469;DP=3039;DP4=1395,1551,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.000329056;MQB=0.00377153;MQSB=3.39526e-13;RPB=0.323014;SGB=44.5415;VDB=0.63445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.5:3486124 chr05:003486124 0 W/3486124-3486124 FN3791-S SNP C -> T AC=1;AN=190;BQB=0.975637;DP=2952;DP4=1692,1169,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=1.9899e-06;MQSB=0.785389;RPB=0.767054;SGB=53.6492;VDB=0.755921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.5:3492547 chr05:003492547 0 W/3492547-3492547 FN1617-S Single Base Substitution C-T INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN976-S.SNP.5:3500342 chr05:003500342 0 W/3500342-3500342 FN976-S Single Base Substitution T-C START_GAINED HET LOC_Os05g06720 GDSL-like lipase/acylhydrolase, putative, expressed SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN3890-S.SNP.5:3502312 chr05:003502312 0 W/3502312-3502312 FN3890-S SNP G -> A AC=1;AN=158;BQB=0.787856;DP=2547;DP4=1035,1407,14,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.77144e-13;MQSB=0.743152;RPB=0.217644;SGB=112.609;VDB=0.457786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.5:3505007 chr05:003505007 0 W/3505007-3505007 FN2499 SNP T -> C AC=2;AN=200;BQB=0.778532;DP=4492;DP4=2391,1625,22,10;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000222618;MQB=2.31225e-08;MQSB=0.997702;RPB=0.825739;SGB=68.5625;VDB=0.255723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.5:3507344 chr05:003507344 0 W/3507344-3507344 FN2433 SNP T -> A AC=1;AN=200;BQB=0.198033;DP=3163;DP4=1877,752,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.51272e-09;MQSB=0.195266;RPB=0.934262;SGB=-165.664;VDB=0.439001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-M.SNP.5:3510454 chr05:003510454 0 W/3510454-3510454 FN1554-M SNP T -> A AC=1;AN=190;BQB=0.969669;DP=4290;DP4=1949,1969,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13318e-11;MQSB=0.996346;RPB=0.748082;SGB=38.983;VDB=0.0522519;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.5:3516430 chr05:003516430 0 W/3516430-3516430 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.937368;DP=2913;DP4=1420,1433,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=4.53984e-05;MQSB=0.507724;RPB=0.722605;SGB=44.1115;VDB=0.153067;EFF=INTRON(MODIFIER||||406|LOC_Os05g06740|protein_coding|CODING|LOC_Os05g06740.1|5|1) FN576-S.SNP.5:3519185 chr05:003519185 0 W/3519185-3519185 FN576-S Single Base Substitution G-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN2708-S.SNP.5:3519287 chr05:003519287 0 W/3519287-3519287 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.418321;DP=4523;DP4=2003,2218,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221092;MQB=2.31229e-09;MQSB=0.556517;RPB=0.908958;SGB=15.9106;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.5:3522466 chr05:003522466 0 W/3522466-3522466 FN3939-S SNP A -> T AC=1;AN=158;BQB=0.889333;DP=2467;DP4=1157,1208,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.87893e-09;MQSB=0.891362;RPB=0.614066;SGB=47.5512;VDB=0.307628;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.5:3537961 chr05:003537961 0 W/3537961-3537961 FN-200 Single Base Substitution T-C INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN1220-S.SNP.5:3539015 chr05:003539015 0 W/3539015-3539015 FN1220-S Single Base Substitution T-A INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1757-S.SNP.5:3540453 chr05:003540453 0 W/3540453-3540453 FN1757-S SNP T -> A AC=1;AN=188;BQB=0.967807;DP=3575;DP4=1312,2220,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.2839e-06;MQSB=0.255863;RPB=0.562598;SGB=23.5329;VDB=0.389951;EFF=INTRON(MODIFIER||||117|LOC_Os05g06780|protein_coding|CODING|LOC_Os05g06780.1|1|1) FN1011-S.SNP.5:3553076 chr05:003553076 0 W/3553076-3553076 FN1011-S Single Base Substitution T-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN925-S.SNP.5:3558115 chr05:003558115 0 W/3558115-3558115 FN925-S Single Base Substitution A-G INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2430.SNP.5:3565801 chr05:003565801 0 W/3565801-3565801 FN2430 SNP A -> G AC=1;AN=200;BQB=0.783324;DP=4561;DP4=2022,2149,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00065775;MQB=2.90184e-10;MQSB=0.326752;RPB=0.993797;SGB=51.0851;VDB=0.802805;EFF=INTRON(MODIFIER||||483|LOC_Os05g06814|protein_coding|CODING|LOC_Os05g06814.1|2|1),INTRON(MODIFIER||||397|LOC_Os05g06814|protein_coding|CODING|LOC_Os05g06814.2|2|1) FN1551-S.SNP.5:3565866 chr05:003565866 0 W/3565866-3565866 FN1551-S Single Base Substitution A-G INTRON Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2588-S.SNP.5:3574468 chr05:003574468 0 W/3574468-3574468 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.572207;DP=4347;DP4=1988,2117,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.16557e-13;MQSB=0.999052;RPB=0.948251;SGB=68.91;VDB=0.593899;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN-144 Single Base Substitution C-T INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-346.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN-346 Single Base Substitution C-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN1031-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN1031-S Single Base Substitution C-T INTERGENIC HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1243-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN1243-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1268-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN1268-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1344-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN1344-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1556-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN1556-S Single Base Substitution C-T INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2268-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN2268-S SNP C -> T AC=2;AN=190;BQB=0.744615;DP=3694;DP4=1737,1749,17,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000270709;MQB=1.28062e-12;MQSB=7.40076e-05;RPB=0.991121;SGB=78.7471;VDB=0.244088;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN242-S Single Base Substitution C-T INTERGENIC HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2729-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN2729-S SNP C -> T AC=2;AN=200;BQB=0.537749;DP=4651;DP4=2293,2095,21,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.59036e-22;MQSB=0.81024;RPB=0.839472;SGB=130.399;VDB=0.144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN3456-S SNP C -> T AC=2;AN=184;BQB=0.983631;DP=3493;DP4=1879,1542,19,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.89218e-13;MQSB=0.801524;RPB=0.966723;SGB=70.9657;VDB=0.273281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN3932-S SNP C -> T AC=2;AN=158;BQB=0.923821;DP=2638;DP4=1401,1147,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.20214e-11;MQSB=0.891711;RPB=0.386781;SGB=99.5005;VDB=0.615681;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN4090-S SNP C -> T AC=2;AN=182;BQB=0.982906;DP=3062;DP4=1674,1316,13,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.27208e-14;MQSB=0.98615;RPB=0.638304;SGB=45.7418;VDB=0.555114;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN432-S Single Base Substitution C-T INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN505-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN505-S Single Base Substitution C-T INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN764-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN764-S Single Base Substitution C-T INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN828-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN828-S Single Base Substitution C-T INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN901-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN901-S Single Base Substitution C-T INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN986-S.SNP.5:3579783 chr05:003579783 0 W/3579783-3579783 FN986-S Single Base Substitution C-T INTERGENIC HOMO SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN421-S.SNP.5:3579824 chr05:003579824 0 W/3579824-3579824 FN421-S Single Base Substitution G-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2082-S.SNP.5:3584793 chr05:003584793 0 W/3584793-3584793 FN2082-S SNP A -> G AC=2;AN=168;BQB=0.833095;DP=3843;DP4=2162,1607,35,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.08748e-24;MQSB=0.742584;RPB=0.150057;SGB=-115.144;VDB=0.0102377;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H247R|322|LOC_Os05g06840|protein_coding|CODING|LOC_Os05g06840.1|12|1) FN907-S.SNP.5:3595057 chr05:003595057 0 W/3595057-3595057 FN907-S Single Base Substitution C-T INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3474-S.SNP.5:3596776 chr05:003596776 0 W/3596776-3596776 FN3474-S SNP A -> T AC=2;AN=184;BQB=0.814508;DP=3747;DP4=1814,1509,25,14;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.142247;MQB=0.489457;MQSB=4.9502e-38;RPB=0.532226;SGB=40.2817;VDB=0.82562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I1577N|1989|LOC_Os05g06870|protein_coding|CODING|LOC_Os05g06870.1|2|1) FN3964-S.SNP.5:3597431 chr05:003597431 0 W/3597431-3597431 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.921255;DP=2658;DP4=1177,1374,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0865312;MQB=0.23073;MQSB=6.10348e-35;RPB=0.921696;SGB=65.4653;VDB=0.731075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H1359N|1989|LOC_Os05g06870|protein_coding|CODING|LOC_Os05g06870.1|2|1) FN3964-S.SNP.5:3597432 chr05:003597432 0 W/3597432-3597432 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.934295;DP=2669;DP4=1185,1381,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0906707;MQB=0.241616;MQSB=5.84578e-35;RPB=0.850706;SGB=65.4653;VDB=0.742898;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R1358|1989|LOC_Os05g06870|protein_coding|CODING|LOC_Os05g06870.1|2|1) FN3843-S.SNP.5:3601637 chr05:003601637 0 W/3601637-3601637 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.960027;DP=4589;DP4=1551,2899,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0226629;MQB=0.988569;MQSB=0;RPB=0.283038;SGB=80.9724;VDB=0.188295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G19R|1989|LOC_Os05g06870|protein_coding|CODING|LOC_Os05g06870.1|1|1) FN3762-S.SNP.5:3604309 chr05:003604309 0 W/3604309-3604309 FN3762-S SNP C -> G AC=2;AN=190;BQB=0.238552;DP=2932;DP4=1458,1163,15,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.14052e-16;MQSB=0.101264;RPB=0.983907;SGB=110.732;VDB=0.457107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.5:3607084 chr05:003607084 0 W/3607084-3607084 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.396146;DP=3863;DP4=1725,1757,12,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.02191e-14;MQSB=0.168041;RPB=0.998264;SGB=25.8654;VDB=0.728163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.5:3613015 chr05:003613015 0 W/3613015-3613015 FN3732-S SNP T -> C AC=2;AN=190;BQB=0.93063;DP=2831;DP4=1391,1281,13,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.8579e-13;MQSB=0.993475;RPB=0.514156;SGB=71.6393;VDB=0.854873;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T124A|310|LOC_Os05g06900|protein_coding|CODING|LOC_Os05g06900.1|2|1) FN1182-S.SNP.5:3637393 chr05:003637393 0 W/3637393-3637393 FN1182-S Single Base Substitution T-C INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3665-S.SNP.5:3640426 chr05:003640426 0 W/3640426-3640426 FN3665-S SNP A -> G AC=1;AN=190;BQB=0.895993;DP=3010;DP4=1510,1364,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38293e-17;MQSB=0.813119;RPB=0.679383;SGB=149.281;VDB=0.852115;EFF=UTR_3_PRIME(MODIFIER||199||578|LOC_Os05g06940|protein_coding|CODING|LOC_Os05g06940.1|2|1) FN-48.SNP.5:3657891 chr05:003657891 0 W/3657891-3657891 FN-48 Single Base Substitution A-T INTRON Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3285-S.SNP.5:3657891 chr05:003657891 0 W/3657891-3657891 FN3285-S SNP A -> T AC=2;AN=184;BQB=0.879482;DP=2671;DP4=1166,1383,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08485e-08;MQSB=0.984405;RPB=0.721023;SGB=71.3514;VDB=0.589287;EFF=INTRON(MODIFIER||||656|LOC_Os05g06980|protein_coding|CODING|LOC_Os05g06980.1|6|1) FN547-S.SNP.5:3657891 chr05:003657891 0 W/3657891-3657891 FN547-S Single Base Substitution A-T INTRON HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3437-S.SNP.5:3659204 chr05:003659204 0 W/3659204-3659204 FN3437-S SNP T -> C AC=1;AN=184;BQB=0.918894;DP=2276;DP4=1190,1012,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26932e-05;MQSB=0.87839;RPB=0.783652;SGB=18.1394;VDB=0.205158;EFF=INTRON(MODIFIER||||656|LOC_Os05g06980|protein_coding|CODING|LOC_Os05g06980.1|4|1) FN2420.SNP.5:3665627 chr05:003665627 0 W/3665627-3665627 FN2420 SNP C -> T AC=1;AN=200;BQB=0.636778;DP=4795;DP4=2600,1895,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.57859e-16;MQSB=0.824879;RPB=0.974757;SGB=65.9573;VDB=0.52139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.5:3673700 chr05:003673700 0 W/3673700-3673700 FN2237-S SNP G -> T AC=1;AN=190;BQB=0.00448555;DP=5328;DP4=2447,2482,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00315912;MQSB=0.964398;RPB=0.847804;SGB=-53.0886;VDB=0.708727;EFF=UTR_3_PRIME(MODIFIER||169||842|LOC_Os05g06990|protein_coding|CODING|LOC_Os05g06990.1|1|1) FN1741-S.SNP.5:3675201 chr05:003675201 0 W/3675201-3675201 FN1741-S SNP A -> G AC=1;AN=188;BQB=0.047029;DP=3068;DP4=1379,1644,12,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.68055e-11;MQSB=0.937453;RPB=0.42976;SGB=-113.464;VDB=0.753571;EFF=INTRON(MODIFIER||||338|LOC_Os05g07000|protein_coding|CODING|LOC_Os05g07000.1|6|1) FN2102-S.SNP.5:3676021 chr05:003676021 0 W/3676021-3676021 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.359833;DP=3653;DP4=1973,1626,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.90254e-10;MQSB=0.980708;RPB=0.500887;SGB=-100.631;VDB=0.285281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A67V|338|LOC_Os05g07000|protein_coding|CODING|LOC_Os05g07000.1|4|1) FN4230-S.SNP.5:3676955 chr05:003676955 0 W/3676955-3676955 FN4230-S SNP C -> G AC=1;AN=170;BQB=0.959561;DP=2552;DP4=1176,1304,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.69179e-09;MQSB=0.999157;RPB=0.918906;SGB=38.3207;VDB=0.795841;EFF=INTRON(MODIFIER||||338|LOC_Os05g07000|protein_coding|CODING|LOC_Os05g07000.1|2|1) FN1215-S.SNP.5:3677878 chr05:003677878 0 W/3677878-3677878 FN1215-S Single Base Substitution A-T INTRON HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2709-S.SNP.5:3678957 chr05:003678957 0 W/3678957-3678957 FN2709-S SNP C -> G AC=1;AN=200;BQB=0.383559;DP=5289;DP4=2476,2468,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000378143;MQB=3.43607e-06;MQSB=0.177291;RPB=0.999471;SGB=40.4492;VDB=0.171636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.5:3682505 chr05:003682505 0 W/3682505-3682505 FN3438-S SNP T -> C AC=1;AN=184;BQB=0.990099;DP=2944;DP4=1783,1032,14,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.76904e-10;MQSB=0.99879;RPB=0.880402;SGB=53.3568;VDB=0.966962;EFF=INTRON(MODIFIER||||194|LOC_Os05g07020|protein_coding|CODING|LOC_Os05g07020.1|2|1) FN1340-S.SNP.5:3682734 chr05:003682734 0 W/3682734-3682734 FN1340-S Single Base Substitution G-A INTRON HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3630-S.SNP.5:3686341 chr05:003686341 0 W/3686341-3686341 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.919979;DP=2816;DP4=1460,1255,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.24239e-05;MQSB=0.0572366;RPB=0.834421;SGB=44.5415;VDB=0.116681;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.5:3688746 chr05:003688746 0 W/3688746-3688746 FN943-S Single Base Substitution C-T INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1713-S.SNP.5:3701079 chr05:003701079 0 W/3701079-3701079 FN1713-S SNP C -> T AC=2;AN=188;BQB=0.0337068;DP=4180;DP4=1905,2208,25,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.02311e-19;MQSB=0.999874;RPB=0.996097;SGB=-211.223;VDB=0.717339;EFF=INTRON(MODIFIER||||258|LOC_Os05g07040|protein_coding|CODING|LOC_Os05g07040.1|3|1) FN-37.SNP.5:3705062 chr05:003705062 0 W/3705062-3705062 FN-37 Single Base Substitution T-A STOP_GAINED Homo LOC_Os05g07050 pre-mRNA-processing-splicing factor 8, putative, expressed SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN-37.SNP.5:3705063 chr05:003705063 0 W/3705063-3705063 FN-37 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1684-S.SNP.5:3708097 chr05:003708097 0 W/3708097-3708097 FN1684-S SNP T -> A AC=2;AN=188;BQB=0.00239547;DP=3826;DP4=1848,1899,22,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00026137;MQB=7.05278e-22;MQSB=0.615043;RPB=0.103834;SGB=-231.963;VDB=0.0317873;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G1450|2350|LOC_Os05g07050|protein_coding|CODING|LOC_Os05g07050.1|6|1) FN2403.SNP.5:3712833 chr05:003712833 0 W/3712833-3712833 FN2403 SNP C -> G AC=1;AN=200;BQB=0.760677;DP=5062;DP4=2235,2540,4,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17072e-09;MQSB=0.105228;RPB=0.998905;SGB=68.0801;VDB=0.578992;EFF=SPLICE_SITE_REGION(LOW||||2350|LOC_Os05g07050|protein_coding|CODING|LOC_Os05g07050.1|3|1),INTRON(MODIFIER||||2350|LOC_Os05g07050|protein_coding|CODING|LOC_Os05g07050.1|3|1) FN3944-S.SNP.5:3722507 chr05:003722507 0 W/3722507-3722507 FN3944-S SNP A -> T AC=1;AN=168;BQB=0.989265;DP=2437;DP4=1101,1271,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.74739e-06;MQSB=0.865775;RPB=0.686172;SGB=43.3113;VDB=0.169734;EFF=UTR_5_PRIME(MODIFIER||1654||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.5|4|1),UTR_5_PRIME(MODIFIER||1654||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.8|3|1),UTR_5_PRIME(MODIFIER||1654||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.7|2|1),UTR_5_PRIME(MODIFIER||1654||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.3|1|1),INTRON(MODIFIER||||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.4|3|1),INTRON(MODIFIER||||560|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.1|1|1),INTRON(MODIFIER||||533|LOC_Os05g07070|protein_coding|CODING|LOC_Os05g07070.2|1|1) FN-129.SNP.5:3726858 chr05:003726858 0 W/3726858-3726858 FN-129 Single Base Substitution A-G INTRON HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN544-S.SNP.5:3730273 chr05:003730273 0 W/3730273-3730273 FN544-S Single Base Substitution A-G INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN1707-S.SNP.5:3733716 chr05:003733716 0 W/3733716-3733716 FN1707-S SNP T -> C AC=1;AN=188;BQB=5.53722e-05;DP=3797;DP4=1785,1970,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.19102e-06;MQSB=0.987;RPB=0.731945;SGB=-157.8;VDB=0.155902;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y41C|430|LOC_Os05g07090|protein_coding|CODING|LOC_Os05g07090.1|3|1),START_GAINED(LOW||||295|LOC_Os05g07090|protein_coding|CODING|LOC_Os05g07090.3|2|1),UTR_5_PRIME(MODIFIER||632||295|LOC_Os05g07090|protein_coding|CODING|LOC_Os05g07090.3|2|1) FN-43.SNP.5:3735534 chr05:003735534 0 W/3735534-3735534 FN-43 Single Base Substitution C-A INTERGENIC Homo SNo: 43, Mutant_ID: FN-43, Generation: M2, Mutations: 18, Genes: 5, Seed availability: Yes. FN-43.SNP.5:3735535 chr05:003735535 0 W/3735535-3735535 FN-43 Single Base Substitution A-T INTERGENIC Homo SNo: 43, Mutant_ID: FN-43, Generation: M2, Mutations: 18, Genes: 5, Seed availability: Yes. FN2687-S.SNP.5:3735695 chr05:003735695 0 W/3735695-3735695 FN2687-S SNP T -> A AC=1;AN=200;BQB=0.45333;DP=5385;DP4=2984,2253,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185701;MQB=1.13363e-12;MQSB=0.869846;RPB=0.996898;SGB=37.3004;VDB=0.163531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.5:3736958 chr05:003736958 0 W/3736958-3736958 FN1363-S Single Base Substitution C-G INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2272-S.SNP.5:3738190 chr05:003738190 0 W/3738190-3738190 FN2272-S SNP A -> T AC=1;AN=190;BQB=0.0328388;DP=4897;DP4=2293,2381,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69168e-14;MQSB=0.837325;RPB=0.786103;SGB=-5.4677;VDB=0.121513;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.5:3739891 chr05:003739891 0 W/3739891-3739891 FN891-S Single Base Substitution G-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN891-S.SNP.5:3739892 chr05:003739892 0 W/3739892-3739892 FN891-S Single Base Substitution G-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3400-S.SNP.5:3749891 chr05:003749891 0 W/3749891-3749891 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.972906;DP=3554;DP4=1706,1775,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.480023;MQB=0.0611313;MQSB=1.14759e-34;RPB=0.175273;SGB=44.2207;VDB=0.632941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.5:3752184 chr05:003752184 0 W/3752184-3752184 FN3324-S SNP A -> T AC=1;AN=184;BQB=0.991856;DP=2774;DP4=1174,1443,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.54468e-06;MQSB=0.0969192;RPB=0.859709;SGB=15.7097;VDB=0.166322;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.5:3757294 chr05:003757294 0 W/3757294-3757294 FN768-S Single Base Substitution C-T INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN936-S.SNP.5:3758520 chr05:003758520 0 W/3758520-3758520 FN936-S Single Base Substitution A-T INTRON HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN4153-S.SNP.5:3768674 chr05:003768674 0 W/3768674-3768674 FN4153-S SNP T -> C AC=1;AN=170;BQB=0.983138;DP=2585;DP4=1269,1209,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96547e-07;MQSB=0.950902;RPB=0.93701;SGB=34.878;VDB=0.5463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I542T|773|LOC_Os05g07130|protein_coding|CODING|LOC_Os05g07130.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I541T|772|LOC_Os05g07130|protein_coding|CODING|LOC_Os05g07130.2|14|1) FN3341-S.SNP.5:3770075 chr05:003770075 0 W/3770075-3770075 FN3341-S SNP A -> T AC=2;AN=184;BQB=0.958022;DP=2501;DP4=1178,1242,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.58279e-08;MQSB=0.654818;RPB=0.96642;SGB=62.3078;VDB=0.829097;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R638W|773|LOC_Os05g07130|protein_coding|CODING|LOC_Os05g07130.1|18|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R637W|772|LOC_Os05g07130|protein_coding|CODING|LOC_Os05g07130.2|18|1) FN3809-S.SNP.5:3772038 chr05:003772038 0 W/3772038-3772038 FN3809-S SNP C -> T AC=1;AN=190;BQB=0.705783;DP=2657;DP4=867,1705,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77695e-07;MQSB=0.398608;RPB=0.592553;SGB=43.2083;VDB=0.240532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.5:3774372 chr05:003774372 0 W/3774372-3774372 FN2754-S SNP A -> G AC=1;AN=200;BQB=0.619576;DP=5442;DP4=2653,2545,7,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.46899e-05;MQSB=0.985804;RPB=0.936175;SGB=22.2439;VDB=0.310568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.5:3799747 chr05:003799747 0 W/3799747-3799747 FN1409-S Single Base Substitution T-A INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN407-S.SNP.5:3800686 chr05:003800686 0 W/3800686-3800686 FN407-S Single Base Substitution G-T INTRON HOMO SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1076-S.SNP.5:3801182 chr05:003801182 0 W/3801182-3801182 FN1076-S Single Base Substitution A-G INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN-40.SNP.5:3806895 chr05:003806895 0 W/3806895-3806895 FN-40 Single Base Substitution T-A INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN3848-S.SNP.5:3810151 chr05:003810151 0 W/3810151-3810151 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.983827;DP=2084;DP4=741,1140,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.20542e-07;MQSB=0.983405;RPB=0.946933;SGB=44.1818;VDB=0.471111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T184S|395|LOC_Os05g07210|protein_coding|CODING|LOC_Os05g07210.1|1|1) FN1275-S.SNP.5:3812087 chr05:003812087 0 W/3812087-3812087 FN1275-S Single Base Substitution C-T INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN1711-S.SNP.5:3814180 chr05:003814180 0 W/3814180-3814180 FN1711-S SNP T -> C AC=1;AN=188;BQB=0.0186439;DP=3581;DP4=1687,1850,8,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19367e-07;MQSB=0.999974;RPB=0.895862;SGB=-98.724;VDB=0.438608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E939G|1061|LOC_Os05g07220|protein_coding|CODING|LOC_Os05g07220.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E927G|1049|LOC_Os05g07220|protein_coding|CODING|LOC_Os05g07220.2|9|1) FN773-S.SNP.5:3814521 chr05:003814521 0 W/3814521-3814521 FN773-S Single Base Substitution G-T INTRON HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1645-S.SNP.5:3822295 chr05:003822295 0 W/3822295-3822295 FN1645-S Single Base Substitution C-A INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN939-S.SNP.5:3822719 chr05:003822719 0 W/3822719-3822719 FN939-S Single Base Substitution C-T INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN369-S.SNP.5:3830368 chr05:003830368 0 W/3830368-3830368 FN369-S Single Base Substitution A-G INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3613-S.SNP.5:3835366 chr05:003835366 0 W/3835366-3835366 FN3613-S SNP A -> T AC=2;AN=190;BQB=0.975103;DP=2978;DP4=1553,1234,24,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.88703e-27;MQSB=0.657222;RPB=0.984383;SGB=162.804;VDB=0.088511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.5:3835368 chr05:003835368 0 W/3835368-3835368 FN3613-S SNP G -> T AC=2;AN=190;BQB=0.972495;DP=2969;DP4=1562,1251,26,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4515e-28;MQSB=0.633849;RPB=0.897392;SGB=174.934;VDB=0.0838231;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.5:3849925 chr05:003849925 0 W/3849925-3849925 FN4148-S SNP C -> A AC=1;AN=170;BQB=0.982167;DP=2217;DP4=964,1169,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.88274e-07;MQSB=0.981068;RPB=0.940713;SGB=27.9928;VDB=0.450112;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.5:3849934 chr05:003849934 0 W/3849934-3849934 FN4148-S SNP T -> A AC=1;AN=170;BQB=0.916047;DP=2177;DP4=892,1169,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.57061e-07;MQSB=0.968361;RPB=0.810321;SGB=38.987;VDB=0.633777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.5:3851553 chr05:003851553 0 W/3851553-3851553 FN2482 SNP C -> T AC=1;AN=200;BQB=0.598432;DP=4686;DP4=2508,1977,18,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.64749e-15;MQSB=0.552079;RPB=0.464504;SGB=52.9314;VDB=0.283737;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.5:3872095 chr05:003872095 0 W/3872095-3872095 FN702-S Single Base Substitution A-T INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN4040-S.SNP.5:3876777 chr05:003876777 0 W/3876777-3876777 FN4040-S SNP C -> T AC=1;AN=168;BQB=0.995616;DP=2591;DP4=1197,1240,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04076e-07;MQSB=0.992547;RPB=0.913594;SGB=19.7539;VDB=0.872584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.5:3889450 chr05:003889450 0 W/3889450-3889450 FN2281 SNP C -> G AC=1;AN=192;BQB=0.03815;DP=3371;DP4=1805,1065,50,14;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00326313;MQB=8.59822e-23;MQSB=2.75974e-12;RPB=0.0546396;SGB=-1052.96;VDB=1.39905e-09;EFF=INTRON(MODIFIER||||1754|LOC_Os05g07310|protein_coding|CODING|LOC_Os05g07310.1|10|1) FN702-S.SNP.5:3890972 chr05:003890972 0 W/3890972-3890972 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2110-S.SNP.5:3891798 chr05:003891798 0 W/3891798-3891798 FN2110-S SNP A -> G AC=1;AN=168;BQB=0.000177239;DP=3371;DP4=1501,1831,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.59389e-10;MQSB=0.729814;RPB=0.428393;SGB=-11.926;VDB=0.0434003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.5:3893937 chr05:003893937 0 W/3893937-3893937 FN1368-S Single Base Substitution T-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3981-S.SNP.5:3894289 chr05:003894289 0 W/3894289-3894289 FN3981-S SNP T -> C AC=1;AN=168;BQB=0.999911;DP=2688;DP4=1341,1215,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.95278e-07;MQSB=0.919871;RPB=0.904763;SGB=-17.5266;VDB=0.279601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.5:3899709 chr05:003899709 0 W/3899709-3899709 FN1466-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os05g07330 retrotransposon protein, putative, unclassified, expressed SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3558-S.SNP.5:3901110 chr05:003901110 0 W/3901110-3901110 FN3558-S SNP G -> A AC=2;AN=188;BQB=0.952714;DP=3768;DP4=1818,1836,14,17;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.134554;MQB=0.124022;MQSB=0.00958843;RPB=0.704954;SGB=99.7635;VDB=0.0778861;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1661L|1775|LOC_Os05g07340|protein_coding|CODING|LOC_Os05g07340.1|4|1) FN3558-S.SNP.5:3901111 chr05:003901111 0 W/3901111-3901111 FN3558-S SNP G -> A AC=2;AN=188;BQB=0.60393;DP=3757;DP4=1821,1865,15,18;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.134416;MQB=0.0846863;MQSB=0.00635488;RPB=0.90313;SGB=144.388;VDB=0.101606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P1661S|1775|LOC_Os05g07340|protein_coding|CODING|LOC_Os05g07340.1|4|1) FN902-S.SNP.5:3902137 chr05:003902137 0 W/3902137-3902137 FN902-S Single Base Substitution C-T INTRON HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1658-S.SNP.5:3913797 chr05:003913797 0 W/3913797-3913797 FN1658-S SNP G -> C AC=1;AN=188;BQB=0.354263;DP=2558;DP4=1399,1118,17,9;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.283425;MQB=0.194433;MQSB=0;RPB=0.313917;SGB=-192.795;VDB=0.0973516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Gat|H1211D|1804|LOC_Os05g07350|protein_coding|CODING|LOC_Os05g07350.1|3|1) FN1118-S.SNP.5:3917085 chr05:003917085 0 W/3917085-3917085 FN1118-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g07350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN903-S.SNP.5:3917381 chr05:003917381 0 W/3917381-3917381 FN903-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN3650-S.SNP.5:3917580 chr05:003917580 0 W/3917580-3917580 FN3650-S SNP C -> A AC=1;AN=190;BQB=0.999208;DP=2982;DP4=1356,1526,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0157612;MQB=0.00330773;MQSB=0.575951;RPB=0.974118;SGB=49.0954;VDB=0.681875;EFF=SPLICE_SITE_REGION(LOW||||1804|LOC_Os05g07350|protein_coding|CODING|LOC_Os05g07350.1|1|1),INTRON(MODIFIER||||1804|LOC_Os05g07350|protein_coding|CODING|LOC_Os05g07350.1|1|1) FN624-S.SNP.5:3931712 chr05:003931712 0 W/3931712-3931712 FN624-S Single Base Substitution T-A INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2583-S.SNP.5:3955950 chr05:003955950 0 W/3955950-3955950 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.778282;DP=4964;DP4=2210,2365,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.30593e-09;MQSB=0.994597;RPB=0.900734;SGB=63.4749;VDB=0.672432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.5:3961927 chr05:003961927 0 W/3961927-3961927 FN2362 SNP G -> A AC=1;AN=192;BQB=0.636793;DP=5080;DP4=2613,2147,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0590551;MQB=0.220724;MQSB=0.0040783;RPB=0.374163;SGB=41.7357;VDB=0.490713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.5:3962042 chr05:003962042 0 W/3962042-3962042 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.996445;DP=4321;DP4=2007,2033,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.169868;MQB=0.0999544;MQSB=0.00688841;RPB=0.976288;SGB=32.9588;VDB=0.985771;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.5:3963512 chr05:003963512 0 W/3963512-3963512 FN463-S Single Base Substitution G-A INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2690-S.SNP.5:3963570 chr05:003963570 0 W/3963570-3963570 FN2690-S SNP T -> C AC=2;AN=200;BQB=0.991079;DP=4335;DP4=1829,2235,19,14;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0.0731257;MQB=0.198453;MQSB=0.541881;RPB=0.927799;SGB=33.5675;VDB=0.0149125;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.5:3968803 chr05:003968803 0 W/3968803-3968803 FN4258-S SNP T -> A AC=1;AN=170;BQB=0.762827;DP=2747;DP4=1235,1399,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000364034;MQB=0.000303854;MQSB=0.144279;RPB=0.125086;SGB=10.1134;VDB=0.0313847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.5:3973788 chr05:003973788 0 W/3973788-3973788 FN1058-S Single Base Substitution G-C INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN957-S.SNP.5:3982434 chr05:003982434 0 W/3982434-3982434 FN957-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g07470 D-mannose binding lectin family protein, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN3297-S.SNP.5:3983346 chr05:003983346 0 W/3983346-3983346 FN3297-S SNP A -> T AC=1;AN=184;BQB=0.942533;DP=3038;DP4=1304,1630,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.60916e-11;MQSB=0.974185;RPB=0.999988;SGB=9.8459;VDB=0.819829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V64D|548|LOC_Os05g07470|protein_coding|CODING|LOC_Os05g07470.1|2|1) FN877-S.SNP.5:3985580 chr05:003985580 0 W/3985580-3985580 FN877-S Single Base Substitution C-T INTERGENIC HET SNo: 783, Mutant_ID: FN877-S, Generation: M2, Mutations: 7, Genes: 2, Seed availability: Yes. FN1737-S.SNP.5:3987987 chr05:003987987 0 W/3987987-3987987 FN1737-S SNP A -> C AC=2;AN=188;BQB=0.454889;DP=3666;DP4=1641,1964,20,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.31087e-19;MQSB=0.973398;RPB=0.69441;SGB=-46.4986;VDB=0.67035;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.5:3989855 chr05:003989855 0 W/3989855-3989855 FN_N1-130-1 Single Base Substitution A-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1351-S.SNP.5:3992876 chr05:003992876 0 W/3992876-3992876 FN1351-S Single Base Substitution A-C INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2172-S.SNP.5:3992940 chr05:003992940 0 W/3992940-3992940 FN2172-S SNP T -> A AC=2;AN=168;BQB=0.131748;DP=2368;DP4=1195,1125,16,19;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0299831;MQB=0.989684;MQSB=4.34006e-16;RPB=0.758319;SGB=-86.8983;VDB=0.590372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.5:3992940 chr05:003992940 0 W/3992940-3992940 FN3781-S SNP T -> A AC=1;AN=190;BQB=0.493088;DP=2618;DP4=1414,1070,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00496562;MQB=0.04003;MQSB=0.000381731;RPB=0.980329;SGB=10.8904;VDB=0.130263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.5:3999337 chr05:003999337 0 W/3999337-3999337 FN1349-S Single Base Substitution G-A INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN887-S.SNP.5:4005652 chr05:004005652 0 W/4005652-4005652 FN887-S Single Base Substitution G-A INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN3837-S.SNP.5:4010049 chr05:004010049 0 W/4010049-4010049 FN3837-S SNP T -> G AC=2;AN=190;BQB=0.715932;DP=2891;DP4=1504,1275,8,11;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.0854376;MQB=0.932204;MQSB=0.00892992;RPB=0.936375;SGB=80.9724;VDB=0.331391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E829D|1777|LOC_Os05g07500|protein_coding|CODING|LOC_Os05g07500.1|3|1) FN-272.SNP.5:4025239 chr05:004025239 0 W/4025239-4025239 FN-272 Single Base Substitution G-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3818-S.SNP.5:4027969 chr05:004027969 0 W/4027969-4027969 FN3818-S SNP C -> T AC=2;AN=190;BQB=0.794145;DP=2740;DP4=1490,1111,20,20;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.58224e-12;MQSB=5.1873e-32;RPB=0.953436;SGB=132.055;VDB=0.852176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.5:4030069 chr05:004030069 0 W/4030069-4030069 FN2388 SNP A -> G AC=2;AN=200;BQB=0.953443;DP=4619;DP4=2234,2107,32,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000216497;MQB=6.96258e-27;MQSB=0.935023;RPB=0.996126;SGB=184.476;VDB=0.949564;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.5:4030962 chr05:004030962 0 W/4030962-4030962 FN1064-S Single Base Substitution G-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2160-S.SNP.5:4037405 chr05:004037405 0 W/4037405-4037405 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.771642;DP=2831;DP4=1556,1244,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.133168;MQB=0.960897;MQSB=0.0013658;RPB=0.500276;SGB=56.6036;VDB=0.315657;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1001T|1874|LOC_Os05g07540|protein_coding|CODING|LOC_Os05g07540.1|2|1) FN2740-S.SNP.5:4042721 chr05:004042721 0 W/4042721-4042721 FN2740-S SNP T -> A AC=1;AN=200;BQB=0.999798;DP=8358;DP4=3507,4520,18,18;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.411582;MQB=0.00182696;MQSB=0;RPB=0.037452;SGB=119.583;VDB=0.106877;EFF=INTRON(MODIFIER||||826|LOC_Os05g07550|protein_coding|CODING|LOC_Os05g07550.1|1|1) FN3970-S.SNP.5:4048336 chr05:004048336 0 W/4048336-4048336 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.999623;DP=2818;DP4=1164,1547,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.11039e-08;MQSB=0.743202;RPB=0.930423;SGB=61.0344;VDB=0.176417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.5:4051449 chr05:004051449 0 W/4051449-4051449 FN2347 SNP G -> C AC=1;AN=192;BQB=0.604973;DP=5095;DP4=2498,2276,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000981354;MQB=0.000279986;MQSB=0.76024;RPB=0.971578;SGB=18.6565;VDB=0.317409;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.5:4052332 chr05:004052332 0 W/4052332-4052332 FN1197-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1619-S.SNP.5:4052628 chr05:004052628 0 W/4052628-4052628 FN1619-S Single Base Substitution G-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-21.SNP.5:4053358 chr05:004053358 0 W/4053358-4053358 FN-21 Single Base Substitution G-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN1262-S.SNP.5:4054398 chr05:004054398 0 W/4054398-4054398 FN1262-S Single Base Substitution G-T INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3658-S.SNP.5:4054496 chr05:004054496 0 W/4054496-4054496 FN3658-S SNP T -> A AC=2;AN=190;BQB=0.659243;DP=2962;DP4=1083,1576,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.41784e-11;MQSB=0.211914;RPB=0.837147;SGB=-100.991;VDB=0.270952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.5:4058702 chr05:004058702 0 W/4058702-4058702 FN2554-S SNP C -> T AC=1;AN=194;BQB=0.999616;DP=3687;DP4=2023,1410,15,4;HOB=5.31406e-05;ICB=0.000106829;MQ=20;MQ0F=0.439653;MQB=0.467767;MQSB=0;RPB=0.270424;SGB=58.1246;VDB=0.585518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.5:4059164 chr05:004059164 0 W/4059164-4059164 FN3675-S SNP G -> T AC=1;AN=190;BQB=0.958261;DP=2926;DP4=1485,1349,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0280246;MQB=0.148497;MQSB=0.932597;RPB=0.628846;SGB=44.5415;VDB=0.410756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.5:4060979 chr05:004060979 0 W/4060979-4060979 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.934662;DP=3265;DP4=1425,1683,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.15559;MQB=0.706129;MQSB=9.35814e-18;RPB=0.799471;SGB=60.9777;VDB=0.799558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.5:4074026 chr05:004074026 0 W/4074026-4074026 FN1375-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2104-S.SNP.5:4074540 chr05:004074540 0 W/4074540-4074540 FN2104-S SNP C -> T AC=2;AN=168;BQB=0.946465;DP=3903;DP4=2046,1799,16,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.50678e-16;MQSB=0.930057;RPB=0.779836;SGB=28.5146;VDB=0.722509;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN-240 Single Base Substitution C-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1224-S.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN1224-S Single Base Substitution C-T INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1258-S.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN1258-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1916.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN1916 Single Base Substitution C-T Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2444.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN2444 SNP C -> T AC=1;AN=200;BQB=0.961214;DP=5300;DP4=2640,2360,17,11;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0409434;MQB=0.833622;MQSB=7.11344e-05;RPB=0.795559;SGB=58.1418;VDB=0.0646822;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.5:4082372 chr05:004082372 0 W/4082372-4082372 FN784-S Single Base Substitution C-T INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN1349-S.SNP.5:4088225 chr05:004088225 0 W/4088225-4088225 FN1349-S Single Base Substitution A-G INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-98.SNP.5:4092374 chr05:004092374 0 W/4092374-4092374 FN-98 Single Base Substitution C-A INTERGENIC HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN-98.SNP.5:4092375 chr05:004092375 0 W/4092375-4092375 FN-98 Single Base Substitution A-G INTERGENIC HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN-159.SNP.5:4100878 chr05:004100878 0 W/4100878-4100878 FN-159 Single Base Substitution G-C INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2138-S.SNP.5:4103322 chr05:004103322 0 W/4103322-4103322 FN2138-S SNP C -> A AC=1;AN=168;BQB=0.290055;DP=3831;DP4=2160,1635,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.25251e-08;MQSB=0.947176;RPB=0.751174;SGB=-37.2282;VDB=0.623997;EFF=INTRON(MODIFIER||||227|LOC_Os05g07640|protein_coding|CODING|LOC_Os05g07640.1|3|1) FN2316.SNP.5:4110831 chr05:004110831 0 W/4110831-4110831 FN2316 SNP G -> T AC=1;AN=192;BQB=0.999926;DP=5029;DP4=2386,2303,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.09155e-15;MQSB=0.927574;RPB=0.97334;SGB=29.2557;VDB=0.4272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.5:4124459 chr05:004124459 0 W/4124459-4124459 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.780169;DP=3028;DP4=1527,1401,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87787e-07;MQSB=0.993267;RPB=0.997923;SGB=18.552;VDB=0.97005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.5:4128963 chr05:004128963 0 W/4128963-4128963 FN-216 Single Base Substitution A-G INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3552-S.SNP.5:4133043 chr05:004133043 0 W/4133043-4133043 FN3552-S SNP T -> C AC=1;AN=188;BQB=0.936358;DP=2708;DP4=1483,1150,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.34686e-05;MQSB=0.985742;RPB=0.465046;SGB=21.8113;VDB=0.33691;EFF=INTRON(MODIFIER||||624|LOC_Os05g07680|protein_coding|CODING|LOC_Os05g07680.2|1|1),INTRON(MODIFIER||||624|LOC_Os05g07680|protein_coding|CODING|LOC_Os05g07680.1|1|1) FN3552-S.SNP.5:4133048 chr05:004133048 0 W/4133048-4133048 FN3552-S SNP C -> A AC=1;AN=188;BQB=0.618714;DP=2747;DP4=1516,1171,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35631e-06;MQSB=0.981532;RPB=0.398375;SGB=35.3493;VDB=0.2421;EFF=INTRON(MODIFIER||||624|LOC_Os05g07680|protein_coding|CODING|LOC_Os05g07680.2|1|1),INTRON(MODIFIER||||624|LOC_Os05g07680|protein_coding|CODING|LOC_Os05g07680.1|1|1) FN224-S.SNP.5:4136393 chr05:004136393 0 W/4136393-4136393 FN224-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN3385-S.SNP.5:4136764 chr05:004136764 0 W/4136764-4136764 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.854999;DP=3026;DP4=1269,1623,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.56324e-07;MQSB=0.983743;RPB=0.987785;SGB=20.7533;VDB=0.347979;EFF=UTR_3_PRIME(MODIFIER||353||101|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.3|4|1),INTRON(MODIFIER||||132|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.1|4|1),INTRON(MODIFIER||||132|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.2|3|1) FN-56.SNP.5:4137907 chr05:004137907 0 W/4137907-4137907 FN-56 Single Base Substitution T-A INTRON HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN4178-S.SNP.5:4138309 chr05:004138309 0 W/4138309-4138309 FN4178-S SNP A -> G AC=1;AN=170;BQB=0.910973;DP=2517;DP4=1263,1174,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.54912e-08;MQSB=0.961295;RPB=0.118242;SGB=17.4413;VDB=0.0525953;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C4|132|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C4|101|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C4|132|LOC_Os05g07690|protein_coding|CODING|LOC_Os05g07690.2|1|1) FN-255.SNP.5:4139690 chr05:004139690 0 W/4139690-4139690 FN-255 Single Base Substitution C-T INTERGENIC HOMO SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN-349.SNP.5:4139803 chr05:004139803 0 W/4139803-4139803 FN-349 Single Base Substitution C-A INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-136.SNP.5:4143227 chr05:004143227 0 W/4143227-4143227 FN-136 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3798-S.SNP.5:4149112 chr05:004149112 0 W/4149112-4149112 FN3798-S SNP A -> G AC=1;AN=190;BQB=0.885391;DP=2860;DP4=1391,1381,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53607e-13;MQSB=0.950201;RPB=0.978365;SGB=90.0802;VDB=0.95306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.5:4157325 chr05:004157325 0 W/4157325-4157325 FN3454-S SNP T -> G AC=1;AN=184;BQB=0.935426;DP=2790;DP4=1462,1235,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.61982e-06;MQSB=0.829799;RPB=0.503938;SGB=21.6609;VDB=0.237542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.5:4158754 chr05:004158754 0 W/4158754-4158754 FN2305 SNP T -> C AC=1;AN=192;BQB=0.722275;DP=5271;DP4=2710,2301,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.70188e-11;MQSB=0.936929;RPB=0.466474;SGB=76.5965;VDB=0.136708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.5:4159406 chr05:004159406 0 W/4159406-4159406 FN1256-S Single Base Substitution C-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN318-S.SNP.5:4161502 chr05:004161502 0 W/4161502-4161502 FN318-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g07730 retrotransposon protein, putative, unclassified, expressed SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2607-S.SNP.5:4165374 chr05:004165374 0 W/4165374-4165374 FN2607-S SNP A -> T AC=1;AN=198;BQB=0.908569;DP=4423;DP4=1967,2049,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.02618e-08;MQSB=0.522378;RPB=0.954121;SGB=9.3494;VDB=0.885436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.5:4165375 chr05:004165375 0 W/4165375-4165375 FN2607-S SNP A -> T AC=1;AN=198;BQB=0.640625;DP=4434;DP4=1977,2063,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23205e-11;MQSB=0.377735;RPB=0.995366;SGB=9.3494;VDB=0.541335;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.5:4168906 chr05:004168906 0 W/4168906-4168906 FN1086-S Single Base Substitution G-C INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2433.SNP.5:4171556 chr05:004171556 0 W/4171556-4171556 FN2433 SNP T -> A AC=1;AN=200;BQB=0.789364;DP=4918;DP4=2351,2303,27,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.75846e-24;MQSB=0.804421;RPB=0.0463511;SGB=169.394;VDB=0.286771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.5:4171592 chr05:004171592 0 W/4171592-4171592 FN2433 SNP A -> G AC=1;AN=200;BQB=0.320594;DP=4836;DP4=2267,2273,22,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00134e-19;MQSB=0.61488;RPB=0.305787;SGB=132.552;VDB=0.837992;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.5:4176717 chr05:004176717 0 W/4176717-4176717 FN-21 Single Base Substitution G-T UTR_3_PRIME Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN-21.SNP.5:4176718 chr05:004176718 0 W/4176718-4176718 FN-21 Single Base Substitution T-A UTR_3_PRIME Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN4075-S.SNP.5:4178739 chr05:004178739 0 W/4178739-4178739 FN4075-S SNP C -> T AC=2;AN=182;BQB=0.257329;DP=3839;DP4=1959,1756,20,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.20735e-14;MQSB=0.882807;RPB=0.348004;SGB=143.35;VDB=0.874543;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V177I|178|LOC_Os05g07750|protein_coding|CODING|LOC_Os05g07750.1|1|1) FN1723-S.SNP.5:4179237 chr05:004179237 0 W/4179237-4179237 FN1723-S SNP G -> T AC=1;AN=188;BQB=0.322716;DP=1885;DP4=728,1106,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000409263;MQSB=0.992796;RPB=0.612093;SGB=13.3597;VDB=0.321996;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R11|178|LOC_Os05g07750|protein_coding|CODING|LOC_Os05g07750.1|1|1) FN2659-S.SNP.5:4179874 chr05:004179874 0 W/4179874-4179874 FN2659-S SNP T -> C AC=1;AN=200;BQB=0.423488;DP=4621;DP4=2245,2149,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.80736e-13;MQSB=0.9046;RPB=0.661805;SGB=86.5007;VDB=0.767656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.5:4191452 chr05:004191452 0 W/4191452-4191452 FN2659-S SNP T -> G AC=1;AN=200;BQB=0.00340335;DP=4035;DP4=2062,1676,11,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0423792;MQB=2.68572e-06;MQSB=0;RPB=0.547211;SGB=14.3054;VDB=0.86757;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.5:4198936 chr05:004198936 0 W/4198936-4198936 FN1356-S Single Base Substitution A-T INTRON HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1533-S.SNP.5:4201392 chr05:004201392 0 W/4201392-4201392 FN1533-S Single Base Substitution G-A INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN4090-S.SNP.5:4207622 chr05:004207622 0 W/4207622-4207622 FN4090-S SNP G -> C AC=2;AN=182;BQB=0.997529;DP=2347;DP4=944,1293,16,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.95559e-13;MQSB=0.939324;RPB=0.885847;SGB=111.774;VDB=0.960103;EFF=UTR_3_PRIME(MODIFIER||36||203|LOC_Os05g07810|protein_coding|CODING|LOC_Os05g07810.1|5|1) FN976-S.SNP.5:4209535 chr05:004209535 0 W/4209535-4209535 FN976-S Single Base Substitution A-G INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1018-S.SNP.5:4215523 chr05:004215523 0 W/4215523-4215523 FN1018-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g07820 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1018-S.SNP.5:4215524 chr05:004215524 0 W/4215524-4215524 FN1018-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2265-S.SNP.5:4219100 chr05:004219100 0 W/4219100-4219100 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.497058;DP=4078;DP4=2495,1189,17,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.49462e-11;MQSB=0.14392;RPB=0.987097;SGB=-9.89872;VDB=0.708974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.5:4220763 chr05:004220763 0 W/4220763-4220763 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.98543;DP=3861;DP4=1655,1976,6,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.43808e-10;MQSB=0.206655;RPB=0.972183;SGB=68.0854;VDB=0.533198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.5:4229103 chr05:004229103 0 W/4229103-4229103 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN672-S.SNP.5:4229558 chr05:004229558 0 W/4229558-4229558 FN672-S Single Base Substitution C-T INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN828-S.SNP.5:4229808 chr05:004229808 0 W/4229808-4229808 FN828-S Single Base Substitution A-G INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN2433.SNP.5:4236594 chr05:004236594 0 W/4236594-4236594 FN2433 SNP G -> A AC=1;AN=200;BQB=0.816067;DP=5043;DP4=2469,2286,19,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31486e-22;MQSB=0.986217;RPB=0.969086;SGB=119.583;VDB=0.935121;EFF=INTRON(MODIFIER||||635|LOC_Os05g07850|protein_coding|CODING|LOC_Os05g07850.1|5|1) FN1461-S.SNP.5:4246757 chr05:004246757 0 W/4246757-4246757 FN1461-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1461-S.SNP.5:4246759 chr05:004246759 0 W/4246759-4246759 FN1461-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1293-S.SNP.5:4247129 chr05:004247129 0 W/4247129-4247129 FN1293-S Single Base Substitution T-C INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1355-S.SNP.5:4248808 chr05:004248808 0 W/4248808-4248808 FN1355-S Single Base Substitution A-G INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2308.SNP.5:4248823 chr05:004248823 0 W/4248823-4248823 FN2308 SNP G -> A AC=1;AN=192;BQB=0.990402;DP=5105;DP4=2370,2455,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.34233e-14;MQSB=0.970057;RPB=0.487052;SGB=68.2948;VDB=0.534313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.5:4248898 chr05:004248898 0 W/4248898-4248898 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN982-S.SNP.5:4250240 chr05:004250240 0 W/4250240-4250240 FN982-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN_N1-116-1.SNP.5:4257620 chr05:004257620 0 W/4257620-4257620 FN_N1-116-1 Single Base Substitution G-T Homo LOC_Os05g07880 phospholipase D, putative, expressed SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN3859-S.SNP.5:4258659 chr05:004258659 0 W/4258659-4258659 FN3859-S SNP T -> A AC=1;AN=158;BQB=0.981169;DP=3058;DP4=1551,1376,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33944e-06;MQSB=0.90032;RPB=0.908653;SGB=47.0672;VDB=0.686666;EFF=INTRON(MODIFIER||||824|LOC_Os05g07880|protein_coding|CODING|LOC_Os05g07880.1|2|1),INTRON(MODIFIER||||824|LOC_Os05g07880|protein_coding|CODING|LOC_Os05g07880.2|2|1) FN2545-S.SNP.5:4260752 chr05:004260752 0 W/4260752-4260752 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.276176;DP=4286;DP4=1981,2027,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.02766e-07;MQSB=0.801;RPB=0.366412;SGB=26.7492;VDB=0.871283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.5:4285383 chr05:004285383 0 W/4285383-4285383 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.476596;DP=4430;DP4=2472,1700,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000225734;MQB=3.94902e-13;MQSB=0.999992;RPB=0.996919;SGB=83.2905;VDB=0.677067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.5:4286656 chr05:004286656 0 W/4286656-4286656 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.984948;DP=4443;DP4=2290,1695,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00675219;MQB=0.000162085;MQSB=0.308064;RPB=0.996415;SGB=25.8654;VDB=0.257232;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.5:4292621 chr05:004292621 0 W/4292621-4292621 FN838-S Single Base Substitution T-C INTRON HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN502-S.SNP.5:4297396 chr05:004297396 0 W/4297396-4297396 FN502-S Single Base Substitution C-T INTRON HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN502-S.SNP.5:4297401 chr05:004297401 0 W/4297401-4297401 FN502-S Single Base Substitution G-T INTRON HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN502-S.SNP.5:4297402 chr05:004297402 0 W/4297402-4297402 FN502-S Single Base Substitution G-T INTRON HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN1222-S.SNP.5:4299332 chr05:004299332 0 W/4299332-4299332 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN-346.SNP.5:4304973 chr05:004304973 0 W/4304973-4304973 FN-346 Single Base Substitution A-G INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2404.SNP.5:4306360 chr05:004306360 0 W/4306360-4306360 FN2404 SNP T -> C AC=1;AN=200;BQB=0.810388;DP=4737;DP4=2436,2000,13,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66913e-22;MQSB=0.999978;RPB=0.824845;SGB=160.183;VDB=0.477601;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.5:4321370 chr05:004321370 0 W/4321370-4321370 FN_788-1-1 Single Base Substitution C-A Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1113-S.SNP.5:4325447 chr05:004325447 0 W/4325447-4325447 FN1113-S Single Base Substitution C-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN504-S.SNP.5:4325854 chr05:004325854 0 W/4325854-4325854 FN504-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g08000 expressed protein SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1079-S.SNP.5:4330376 chr05:004330376 0 W/4330376-4330376 FN1079-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08010 OsFBX161 - F-box domain containing protein, expressed SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1508-S.SNP.5:4332934 chr05:004332934 0 W/4332934-4332934 FN1508-S Single Base Substitution G-A INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2199-S.SNP.5:4336798 chr05:004336798 0 W/4336798-4336798 FN2199-S SNP T -> A AC=1;AN=190;BQB=0.254637;DP=4834;DP4=2397,2134,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0213074;MQB=0.995197;MQSB=2.96899e-15;RPB=0.796014;SGB=36.1006;VDB=0.690781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.5:4354544 chr05:004354544 0 W/4354544-4354544 FN2124-S SNP C -> G AC=2;AN=168;BQB=0.948452;DP=944;DP4=409,480,7,11;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.0158898;MQB=0.908159;MQSB=0.0904713;RPB=0.998905;SGB=45.1368;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.5:4354574 chr05:004354574 0 W/4354574-4354574 FN2340 SNP G -> A AC=1;AN=192;BQB=0.992652;DP=3990;DP4=1581,1659,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00150376;MQB=0.000193444;MQSB=7.0916e-11;RPB=0.871137;SGB=58.3392;VDB=0.276349;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.5:4355855 chr05:004355855 0 W/4355855-4355855 FN3835-S SNP C -> A AC=1;AN=190;BQB=0.980765;DP=3396;DP4=1973,1347,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.182862;MQB=0.41343;MQSB=5.82571e-17;RPB=0.872579;SGB=18.552;VDB=0.766597;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.5:4362126 chr05:004362126 0 W/4362126-4362126 FN-269 Single Base Substitution C-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-30.SNP.5:4362126 chr05:004362126 0 W/4362126-4362126 FN-30 Single Base Substitution C-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3711-S.SNP.5:4364453 chr05:004364453 0 W/4364453-4364453 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.923069;DP=2262;DP4=980,1191,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000884173;MQB=2.09812e-06;MQSB=0.953069;RPB=0.947267;SGB=39.9877;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.5:4367302 chr05:004367302 0 W/4367302-4367302 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1204-S.SNP.5:4389140 chr05:004389140 0 W/4389140-4389140 FN1204-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08060 expressed protein SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN424-S.SNP.5:4392767 chr05:004392767 0 W/4392767-4392767 FN424-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g08070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN986-S.SNP.5:4409353 chr05:004409353 0 W/4409353-4409353 FN986-S Single Base Substitution C-T INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2386.SNP.5:4410459 chr05:004410459 0 W/4410459-4410459 FN2386 SNP C -> T AC=1;AN=192;BQB=0.968528;DP=5737;DP4=1689,3475,5,26;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.00610075;MQB=6.08868e-10;MQSB=0;RPB=0.471102;SGB=64.8148;VDB=0.378982;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.5:4412302 chr05:004412302 0 W/4412302-4412302 FN4160-S SNP G -> A AC=1;AN=170;BQB=0.998407;DP=2646;DP4=851,1691,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.54977e-09;MQSB=0.353913;RPB=0.883837;SGB=56.7575;VDB=0.453798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.5:4415813 chr05:004415813 0 W/4415813-4415813 FN2545-S SNP A -> G AC=1;AN=198;BQB=0.629897;DP=3861;DP4=1656,1961,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.54486e-10;MQSB=0.997641;RPB=0.650908;SGB=47.3393;VDB=0.421008;EFF=UTR_3_PRIME(MODIFIER||196||204|LOC_Os05g08110|protein_coding|CODING|LOC_Os05g08110.1|1|1) FN4083-S.SNP.5:4416878 chr05:004416878 0 W/4416878-4416878 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.845545;DP=2894;DP4=1449,1379,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.57559e-09;MQSB=0.682226;RPB=0.547294;SGB=71.1765;VDB=0.477201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.5:4422135 chr05:004422135 0 W/4422135-4422135 FN2547-S SNP C -> T AC=1;AN=198;BQB=0.238732;DP=5285;DP4=2398,2620,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.100284;MQB=0.82614;MQSB=0;RPB=0.842081;SGB=-16.2163;VDB=0.282505;EFF=INTRON(MODIFIER||||518|LOC_Os05g08120|protein_coding|CODING|LOC_Os05g08120.1|4|1) FN2460.SNP.5:4430703 chr05:004430703 0 W/4430703-4430703 FN2460 SNP C -> T AC=2;AN=200;BQB=0.450472;DP=4674;DP4=2155,2195,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.31202e-16;MQSB=0.75482;RPB=0.989741;SGB=31.9623;VDB=0.352783;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F315|769|LOC_Os05g08130|protein_coding|CODING|LOC_Os05g08130.1|3|1) FN2715-S.SNP.5:4433346 chr05:004433346 0 W/4433346-4433346 FN2715-S SNP C -> T AC=2;AN=200;BQB=0.3856;DP=4632;DP4=2266,2062,15,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00345423;MQB=5.74159e-12;MQSB=0.822308;RPB=0.945248;SGB=90.7419;VDB=0.469426;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.5:4435628 chr05:004435628 0 W/4435628-4435628 FN4117-S SNP T -> A AC=2;AN=182;BQB=0.981219;DP=3214;DP4=1507,1597,17,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.95402e-17;MQSB=0.262129;RPB=0.95772;SGB=134.329;VDB=0.486529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aAa|I37K|127|LOC_Os05g08140|protein_coding|CODING|LOC_Os05g08140.1|2|1) FN2779-S.SNP.5:4437327 chr05:004437327 0 W/4437327-4437327 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.355523;DP=3979;DP4=1856,1863,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.74497e-19;MQSB=0.846956;RPB=0.127497;SGB=30.086;VDB=0.703193;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A1320|1533|LOC_Os05g08150|protein_coding|CODING|LOC_Os05g08150.1|9|1) FN3817-S.SNP.5:4440148 chr05:004440148 0 W/4440148-4440148 FN3817-S SNP C -> T AC=1;AN=190;BQB=0.800031;DP=2762;DP4=1268,1376,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01495e-07;MQSB=0.95726;RPB=0.613279;SGB=49.0954;VDB=0.762846;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G659|1533|LOC_Os05g08150|protein_coding|CODING|LOC_Os05g08150.1|4|1) FN491-S.SNP.5:4453153 chr05:004453153 0 W/4453153-4453153 FN491-S Single Base Substitution G-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2235-S.SNP.5:4463793 chr05:004463793 0 W/4463793-4463793 FN2235-S SNP C -> T AC=1;AN=190;BQB=0.651089;DP=4876;DP4=2311,2185,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205086;MQB=4.35102e-09;MQSB=0.838431;RPB=0.331552;SGB=23.6597;VDB=0.286488;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I230|455|LOC_Os05g08180|protein_coding|CODING|LOC_Os05g08180.1|3|1) FN3930-S.SNP.5:4466469 chr05:004466469 0 W/4466469-4466469 FN3930-S SNP T -> A AC=2;AN=158;BQB=0.96885;DP=2449;DP4=1076,1219,19,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.00122499;MQB=3.38714e-19;MQSB=0.760115;RPB=0.910929;SGB=125.049;VDB=0.371032;EFF=INTRON(MODIFIER||||358|LOC_Os05g08190|protein_coding|CODING|LOC_Os05g08190.1|1|1) FN399-S.SNP.5:4470689 chr05:004470689 0 W/4470689-4470689 FN399-S Single Base Substitution T-C INTERGENIC HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1573-S.SNP.5:4470871 chr05:004470871 0 W/4470871-4470871 FN1573-S Single Base Substitution G-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3857-S.SNP.5:4473409 chr05:004473409 0 W/4473409-4473409 FN3857-S SNP C -> G AC=1;AN=158;BQB=0.983977;DP=2359;DP4=1121,1159,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.99188e-06;MQSB=0.656181;RPB=0.959293;SGB=38.3284;VDB=0.402583;EFF=INTRON(MODIFIER||||197|LOC_Os05g08210|protein_coding|CODING|LOC_Os05g08210.1|2|1) FN2797-S.SNP.5:4474327 chr05:004474327 0 W/4474327-4474327 FN2797-S SNP C -> T AC=1;AN=198;BQB=0.0910421;DP=4412;DP4=2344,1912,13,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.21803e-07;MQSB=0.697662;RPB=0.920457;SGB=-58.4208;VDB=0.978239;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.5:4474428 chr05:004474428 0 W/4474428-4474428 FN500-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2091-S.SNP.5:4477246 chr05:004477246 0 W/4477246-4477246 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.999334;DP=2448;DP4=1084,1328,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=31;MQ0F=0.107026;MQB=0.543052;MQSB=0;RPB=0.777779;SGB=4.1907;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.5:4485719 chr05:004485719 0 W/4485719-4485719 FN3595-S SNP G -> A AC=2;AN=190;BQB=0.229816;DP=2900;DP4=1356,1439,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.39704e-15;MQSB=0.997996;RPB=0.993818;SGB=153.834;VDB=0.816185;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.5:4487042 chr05:004487042 0 W/4487042-4487042 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN3956-S.SNP.5:4489236 chr05:004489236 0 W/4489236-4489236 FN3956-S SNP T -> C AC=1;AN=168;BQB=0.967756;DP=1576;DP4=228,1260,2,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.14723e-05;MQSB=0.000361523;RPB=0.940727;SGB=30.0193;VDB=0.175997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.5:4489627 chr05:004489627 0 W/4489627-4489627 FN2123-S SNP C -> A AC=1;AN=168;BQB=0.250441;DP=1721;DP4=1315,334,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30084e-08;MQSB=0.950608;RPB=0.935711;SGB=58.7637;VDB=0.155969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.5:4491165 chr05:004491165 0 W/4491165-4491165 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.452053;DP=2090;DP4=911,853,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000478469;MQB=0.0221468;MQSB=8.05147e-05;RPB=0.215522;SGB=8.58354;VDB=0.646518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.5:4494616 chr05:004494616 0 W/4494616-4494616 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.961768;DP=3584;DP4=1892,1397,14,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.31706e-10;MQSB=0.991279;RPB=0.404138;SGB=31.9395;VDB=0.366246;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.5:4495879 chr05:004495879 0 W/4495879-4495879 FN3924-S SNP A -> T AC=1;AN=158;BQB=0.775653;DP=2217;DP4=1088,951,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.30432e-08;MQSB=0.981264;RPB=0.0725919;SGB=8.93339;VDB=0.783491;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.5:4496151 chr05:004496151 0 W/4496151-4496151 FN1440-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2476.SNP.5:4496151 chr05:004496151 0 W/4496151-4496151 FN2476 SNP G -> A AC=1;AN=200;BQB=0.738397;DP=4204;DP4=2155,1771,15,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00142721;MQB=4.13751e-13;MQSB=1.84957e-05;RPB=0.854413;SGB=-4.63785;VDB=0.804142;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.5:4500597 chr05:004500597 0 W/4500597-4500597 FN3353-S SNP A -> G AC=2;AN=184;BQB=0.827508;DP=3111;DP4=1478,1473,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.3605e-14;MQSB=0.644131;RPB=0.383864;SGB=134.656;VDB=0.442811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3728-S.SNP.5:4502626 chr05:004502626 0 W/4502626-4502626 FN3728-S SNP G -> A AC=1;AN=190;BQB=0.980093;DP=2769;DP4=1285,1384,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7011e-08;MQSB=0.962364;RPB=0.61422;SGB=46.7622;VDB=0.521675;EFF=INTRON(MODIFIER||||501|LOC_Os05g08250|protein_coding|CODING|LOC_Os05g08250.1|5|1) FN2664-S.SNP.5:4503488 chr05:004503488 0 W/4503488-4503488 FN2664-S SNP G -> T AC=2;AN=200;BQB=0.952439;DP=4365;DP4=1886,2200,30,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.67005e-27;MQSB=0.756907;RPB=0.968383;SGB=177.266;VDB=0.00776046;EFF=INTRON(MODIFIER||||501|LOC_Os05g08250|protein_coding|CODING|LOC_Os05g08250.1|7|1) FN2207-S.SNP.5:4527762 chr05:004527762 0 W/4527762-4527762 FN2207-S SNP G -> T AC=1;AN=190;BQB=0.913903;DP=4821;DP4=2174,2379,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00414852;MQB=0.00185734;MQSB=0.0180494;RPB=0.901513;SGB=35.4339;VDB=0.836981;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A1686S|1811|LOC_Os05g08290|protein_coding|CODING|LOC_Os05g08290.1|6|1) FN_769-4-1.SNP.5:4531441 chr05:004531441 0 W/4531441-4531441 FN_769-4-1 Single Base Substitution T-G HET LOC_Os05g08300 retrotransposon protein, putative, unclassified, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN3629-S.SNP.5:4534287 chr05:004534287 0 W/4534287-4534287 FN3629-S SNP C -> G AC=2;AN=190;BQB=0.969482;DP=2932;DP4=1402,1387,19,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.59962e-14;MQSB=0.481538;RPB=0.296427;SGB=131.065;VDB=0.817792;EFF=INTERGENIC(MODIFIER||||||||||1) FN593-S.SNP.5:4537597 chr05:004537597 0 W/4537597-4537597 FN593-S Single Base Substitution A-T INTRON HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN593-S.SNP.5:4537603 chr05:004537603 0 W/4537603-4537603 FN593-S Single Base Substitution G-A INTRON HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2673-S.SNP.5:4549729 chr05:004549729 0 W/4549729-4549729 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.679575;DP=4495;DP4=2205,1986,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67737e-09;MQSB=0.951577;RPB=0.904441;SGB=40.2696;VDB=0.108008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.5:4550226 chr05:004550226 0 W/4550226-4550226 FN1497-S Single Base Substitution T-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN496-S.SNP.5:4553760 chr05:004553760 0 W/4553760-4553760 FN496-S Single Base Substitution G-A INTRON HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN-53.SNP.5:4560781 chr05:004560781 0 W/4560781-4560781 FN-53 Single Base Substitution T-C INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1627-S.SNP.5:4577183 chr05:004577183 0 W/4577183-4577183 FN1627-S Single Base Substitution C-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN-81.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN-81 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1290-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN1290-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1336-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN1336-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1358-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN1358-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1513-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN1513-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1579-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN1579-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2374.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN2374 SNP C -> A AC=2;AN=192;BQB=0.223728;DP=4872;DP4=2305,2335,16,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.12599e-20;MQSB=0.691472;RPB=0.978476;SGB=87.8939;VDB=0.395884;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D284Y|493|LOC_Os05g08400|protein_coding|CODING|LOC_Os05g08400.1|3|1) FN3505-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN3505-S SNP C -> A AC=2;AN=188;BQB=0.257273;DP=2593;DP4=1209,1314,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.28085e-11;MQSB=0.93898;RPB=0.343697;SGB=103.498;VDB=0.56209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D284Y|493|LOC_Os05g08400|protein_coding|CODING|LOC_Os05g08400.1|3|1) FN3713-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN3713-S SNP C -> A AC=1;AN=190;BQB=0.711412;DP=2793;DP4=1349,1354,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.6144e-08;MQSB=0.978231;RPB=0.684427;SGB=58.2031;VDB=0.33346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D284Y|493|LOC_Os05g08400|protein_coding|CODING|LOC_Os05g08400.1|3|1) FN466-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN466-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN914-S.SNP.5:4582177 chr05:004582177 0 W/4582177-4582177 FN914-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g08400 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3824-S.SNP.5:4589092 chr05:004589092 0 W/4589092-4589092 FN3824-S SNP A -> G AC=1;AN=190;BQB=0.747532;DP=3139;DP4=1815,1197,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30577e-08;MQSB=0.998461;RPB=0.766079;SGB=76.4186;VDB=0.171442;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.5:4594584 chr05:004594584 0 W/4594584-4594584 FN779-S Single Base Substitution G-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3542-S.SNP.5:4594945 chr05:004594945 0 W/4594945-4594945 FN3542-S SNP C -> T AC=1;AN=188;BQB=0.99099;DP=2715;DP4=1386,1259,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.78468e-11;MQSB=0.999974;RPB=0.744238;SGB=50.1574;VDB=0.489196;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.5:4595511 chr05:004595511 0 W/4595511-4595511 FN765-S Single Base Substitution C-T INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3725-S.SNP.5:4597475 chr05:004597475 0 W/4597475-4597475 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.286923;DP=3316;DP4=1451,1696,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12306e-06;MQSB=0.96274;RPB=0.433752;SGB=18.552;VDB=0.515483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.5:4602640 chr05:004602640 0 W/4602640-4602640 FN1572-S Single Base Substitution G-T INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3941-S.SNP.5:4611832 chr05:004611832 0 W/4611832-4611832 FN3941-S SNP G -> C AC=1;AN=168;BQB=0.51452;DP=2275;DP4=1054,1125,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.80742e-08;MQSB=0.996863;RPB=0.851205;SGB=-0.101747;VDB=0.15791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E273D|424|LOC_Os05g08440|protein_coding|CODING|LOC_Os05g08440.1|2|1) FN-67.SNP.5:4617350 chr05:004617350 0 W/4617350-4617350 FN-67 Single Base Substitution A-T INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2442.SNP.5:4617350 chr05:004617350 0 W/4617350-4617350 FN2442 SNP A -> T AC=1;AN=200;BQB=0.955427;DP=4551;DP4=1899,2427,9,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.42627e-06;MQSB=0.699718;RPB=0.0901519;SGB=-13.1102;VDB=0.019284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.5:4619562 chr05:004619562 0 W/4619562-4619562 FN3288-S SNP A -> T AC=2;AN=184;BQB=0.972025;DP=3144;DP4=1570,1322,18,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76915e-19;MQSB=0.927597;RPB=0.983555;SGB=46.3688;VDB=0.284729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.5:4626375 chr05:004626375 0 W/4626375-4626375 FN1384-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3964-S.SNP.5:4626591 chr05:004626591 0 W/4626591-4626591 FN3964-S SNP C -> T AC=1;AN=168;BQB=0.94496;DP=2232;DP4=1078,1040,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.0867e-11;MQSB=0.730082;RPB=0.833223;SGB=31.908;VDB=0.347861;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A528T|544|LOC_Os05g08480|protein_coding|CODING|LOC_Os05g08480.1|1|1) FN3811-S.SNP.5:4627738 chr05:004627738 0 W/4627738-4627738 FN3811-S SNP G -> A AC=2;AN=190;BQB=0.986192;DP=2812;DP4=1611,1078,23,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000355619;MQB=2.74426e-13;MQSB=0.54924;RPB=0.972114;SGB=135.619;VDB=0.900554;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D145|544|LOC_Os05g08480|protein_coding|CODING|LOC_Os05g08480.1|1|1) W423-5-1.SNP.5:4627738 chr05:004627738 0 W/4627738-4627738 W423-5-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN442-S.SNP.5:4630713 chr05:004630713 0 W/4630713-4630713 FN442-S Single Base Substitution A-C INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-136.SNP.5:4645027 chr05:004645027 0 W/4645027-4645027 FN-136 Single Base Substitution A-C INTRON HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2224-S.SNP.5:4648494 chr05:004648494 0 W/4648494-4648494 FN2224-S SNP C -> G AC=1;AN=190;BQB=0.590874;DP=4180;DP4=1631,2047,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41335e-13;MQSB=0.962183;RPB=0.406728;SGB=51.7524;VDB=0.377254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.5:4648611 chr05:004648611 0 W/4648611-4648611 FN2702-S SNP A -> T AC=1;AN=200;BQB=0.766095;DP=3783;DP4=1602,1991,7,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000793021;MQB=4.49947e-07;MQSB=0.6811;RPB=0.831849;SGB=24.2746;VDB=0.726376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.5:4648624 chr05:004648624 0 W/4648624-4648624 FN3826-S SNP T -> C AC=1;AN=190;BQB=0.739905;DP=1754;DP4=694,959,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000746032;MQSB=0.159369;RPB=0.949766;SGB=35.4339;VDB=0.845268;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.5:4650681 chr05:004650681 0 W/4650681-4650681 FN3886-S SNP C -> T AC=2;AN=158;BQB=0.993324;DP=2360;DP4=996,1222,14,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.90111e-14;MQSB=0.98014;RPB=0.986402;SGB=112.609;VDB=0.356212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.5:4655583 chr05:004655583 0 W/4655583-4655583 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.0337226;DP=3685;DP4=1973,1660,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27195e-06;MQSB=0.981755;RPB=0.804732;SGB=-87.7854;VDB=0.401117;EFF=INTRON(MODIFIER||||501|LOC_Os05g08530|protein_coding|CODING|LOC_Os05g08530.1|1|1) FN1108-S.SNP.5:4659133 chr05:004659133 0 W/4659133-4659133 FN1108-S Single Base Substitution T-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3819-S.SNP.5:4660142 chr05:004660142 0 W/4660142-4660142 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.922597;DP=2815;DP4=1562,1137,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.28065e-07;MQSB=0.137637;RPB=0.932626;SGB=49.0954;VDB=0.719293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.5:4664870 chr05:004664870 0 W/4664870-4664870 FN2333 SNP G -> C AC=1;AN=192;BQB=0.434439;DP=4095;DP4=1718,2005,8,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0002442;MQB=9.14001e-14;MQSB=0.984693;RPB=0.942618;SGB=-148.54;VDB=0.900412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.5:4666786 chr05:004666786 0 W/4666786-4666786 FN3722-S SNP A -> G AC=1;AN=190;BQB=0.781065;DP=2756;DP4=1344,1210,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.7974e-08;MQSB=0.956537;RPB=0.994659;SGB=32.5467;VDB=0.593729;EFF=INTRON(MODIFIER||||58|LOC_Os05g08554|protein_coding|CODING|LOC_Os05g08554.1|1|1) FN497-S.SNP.5:4668200 chr05:004668200 0 W/4668200-4668200 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3504-S.SNP.5:4672482 chr05:004672482 0 W/4672482-4672482 FN3504-S SNP A -> G AC=1;AN=188;BQB=0.461172;DP=2826;DP4=1016,1545,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.15839e-10;MQSB=0.993936;RPB=0.902609;SGB=-36.9078;VDB=0.617739;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.5:4673689 chr05:004673689 0 W/4673689-4673689 FN3993-S SNP G -> A AC=1;AN=168;BQB=0.69971;DP=2212;DP4=995,1090,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50347e-06;MQSB=0.981898;RPB=0.990135;SGB=14.8923;VDB=0.804268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.5:4680449 chr05:004680449 0 W/4680449-4680449 FN2272-S SNP C -> T AC=1;AN=190;BQB=0.139994;DP=5032;DP4=2255,2300,25,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.39612e-19;MQSB=0.447227;RPB=0.25777;SGB=-140.129;VDB=0.318236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.5:4681133 chr05:004681133 0 W/4681133-4681133 FN2284 SNP A -> T AC=1;AN=192;BQB=0.123361;DP=5161;DP4=2329,2551,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.9315e-16;MQSB=0.971399;RPB=0.933667;SGB=-5.7391;VDB=0.962164;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.5:4688809 chr05:004688809 0 W/4688809-4688809 FN547-S Single Base Substitution G-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN682-S.SNP.5:4689612 chr05:004689612 0 W/4689612-4689612 FN682-S Single Base Substitution G-A INTERGENIC HOMO SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2617-S.SNP.5:4697911 chr05:004697911 0 W/4697911-4697911 FN2617-S SNP A -> G AC=1;AN=198;BQB=0.781998;DP=4352;DP4=1961,2177,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82554e-09;MQSB=0.862326;RPB=0.654646;SGB=50.9344;VDB=0.210254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.5:4702244 chr05:004702244 0 W/4702244-4702244 FN2286 SNP C -> T AC=1;AN=192;BQB=0.782197;DP=4735;DP4=2289,2169,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.69034e-12;MQSB=0.816304;RPB=0.963256;SGB=61.1661;VDB=0.506206;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.5:4703009 chr05:004703009 0 W/4703009-4703009 FN725-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN3457-S.SNP.5:4718167 chr05:004718167 0 W/4718167-4718167 FN3457-S SNP G -> A AC=2;AN=184;BQB=0.475477;DP=2788;DP4=1200,1485,11,7;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.25127e-05;MQSB=0.948225;RPB=0.681859;SGB=53.3568;VDB=0.453698;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.5:4722171 chr05:004722171 0 W/4722171-4722171 FN764-S Single Base Substitution T-A INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2655-S.SNP.5:4722643 chr05:004722643 0 W/4722643-4722643 FN2655-S SNP G -> T AC=1;AN=200;BQB=0.856724;DP=4768;DP4=2252,2306,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56622e-07;MQSB=0.864962;RPB=0.840295;SGB=63.4749;VDB=0.556033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.5:4727757 chr05:004727757 0 W/4727757-4727757 FN3421-S SNP T -> A AC=1;AN=184;BQB=0.996343;DP=2552;DP4=1224,1247,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93071e-07;MQSB=0.902124;RPB=0.522917;SGB=28.7043;VDB=0.0907646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2404.SNP.5:4734569 chr05:004734569 0 W/4734569-4734569 FN2404 SNP T -> C AC=1;AN=200;BQB=0.968586;DP=4640;DP4=2121,2162,29,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97567e-23;MQSB=0.900799;RPB=0.32456;SGB=2.62419;VDB=0.550298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.5:4735696 chr05:004735696 0 W/4735696-4735696 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.899916;DP=3363;DP4=1821,1447,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.82156e-09;MQSB=0.992683;RPB=0.495737;SGB=46.3132;VDB=0.79644;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H391|439|LOC_Os05g08640|protein_coding|CODING|LOC_Os05g08640.1|2|1) FN2234-S.SNP.5:4739461 chr05:004739461 0 W/4739461-4739461 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.557521;DP=4740;DP4=2417,2084,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000632911;MQB=0.00305968;MQSB=0.289742;RPB=0.179041;SGB=-0.550503;VDB=0.162982;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.5:4745176 chr05:004745176 0 W/4745176-4745176 FN944-S Single Base Substitution G-C INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2534-S.SNP.5:4748177 chr05:004748177 0 W/4748177-4748177 FN2534-S SNP T -> C AC=1;AN=198;BQB=0.490496;DP=4192;DP4=1700,2240,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00023855;MQB=4.51357e-09;MQSB=0.530192;RPB=0.989624;SGB=67.9293;VDB=0.20292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.5:4749572 chr05:004749572 0 W/4749572-4749572 FN1195-S Single Base Substitution G-C INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3851-S.SNP.5:4756064 chr05:004756064 0 W/4756064-4756064 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.999469;DP=2112;DP4=1077,935,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00236742;MQB=0.000233199;MQSB=0.085439;RPB=0.972115;SGB=42.6978;VDB=0.152121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.5:4756135 chr05:004756135 0 W/4756135-4756135 FN3651-S SNP G -> C AC=1;AN=190;BQB=0.996869;DP=2432;DP4=1178,1161,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00123355;MQB=0.00066568;MQSB=0.0161422;RPB=0.502041;SGB=25.439;VDB=0.0495969;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.5:4756257 chr05:004756257 0 W/4756257-4756257 FN581-S Single Base Substitution T-C INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3773-S.SNP.5:4760413 chr05:004760413 0 W/4760413-4760413 FN3773-S SNP T -> A AC=2;AN=190;BQB=0.528972;DP=3320;DP4=1366,1853,13,11;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.124699;MQB=0.00136701;MQSB=0.160335;RPB=0.212314;SGB=103.742;VDB=0.44824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S1004T|1607|LOC_Os05g08694|protein_coding|CODING|LOC_Os05g08694.1|8|1) FN3773-S.SNP.5:4760414 chr05:004760414 0 W/4760414-4760414 FN3773-S SNP C -> A AC=2;AN=190;BQB=0.357858;DP=3337;DP4=1371,1846,14,12;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.125262;MQB=0.00131456;MQSB=0.175316;RPB=0.184819;SGB=21.2038;VDB=0.245328;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S1004*|1607|LOC_Os05g08694|protein_coding|CODING|LOC_Os05g08694.1|8|1);LOF=(LOC_Os05g08694|LOC_Os05g08694|1|1.00);NMD=(LOC_Os05g08694|LOC_Os05g08694|1|1.00) W7-1-1.SNP.5:4761240 chr05:004761240 0 W/4761240-4761240 W7-1-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g08694 retrotransposon protein, putative, unclassified, expressed SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3773-S.SNP.5:4768419 chr05:004768419 0 W/4768419-4768419 FN3773-S SNP A -> C AC=2;AN=190;BQB=0.999612;DP=2941;DP4=1193,1595,9,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.56452e-20;MQSB=0.728668;RPB=0.863343;SGB=149.281;VDB=0.877781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.5:4773789 chr05:004773789 0 W/4773789-4773789 FN2457 SNP T -> A AC=1;AN=200;BQB=0.897074;DP=3870;DP4=2102,1542,12,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000258398;MQB=6.28281e-09;MQSB=0.549172;RPB=0.894464;SGB=51.0851;VDB=0.143584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.5:4773816 chr05:004773816 0 W/4773816-4773816 FN1414-S Single Base Substitution T-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN4137-S.SNP.5:4789002 chr05:004789002 0 W/4789002-4789002 FN4137-S SNP C -> G AC=1;AN=170;BQB=0.98405;DP=2749;DP4=1353,1319,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.16501e-08;MQSB=0.978935;RPB=0.981487;SGB=56.7575;VDB=0.680992;EFF=INTRON(MODIFIER||||311|LOC_Os05g08730|protein_coding|CODING|LOC_Os05g08730.1|2|1) FN2677-S.SNP.5:4790209 chr05:004790209 0 W/4790209-4790209 FN2677-S SNP C -> A AC=2;AN=200;BQB=0.97426;DP=4865;DP4=2236,2326,30,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.34354e-32;MQSB=0.807477;RPB=0.825508;SGB=170.056;VDB=0.147329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.5:4790210 chr05:004790210 0 W/4790210-4790210 FN2677-S SNP T -> A AC=2;AN=200;BQB=0.97707;DP=4886;DP4=2233,2376,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.11731e-29;MQSB=0.890786;RPB=0.843504;SGB=162.845;VDB=0.271766;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.5:4791147 chr05:004791147 0 W/4791147-4791147 FN832-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN3860-S.SNP.5:4791748 chr05:004791748 0 W/4791748-4791748 FN3860-S SNP G -> C AC=1;AN=158;BQB=0.799821;DP=1779;DP4=955,697,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000344592;MQSB=0.521282;RPB=0.946272;SGB=29.5899;VDB=0.762988;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S54|283|LOC_Os05g08740|protein_coding|CODING|LOC_Os05g08740.1|1|1) FN-296.SNP.5:4793300 chr05:004793300 0 W/4793300-4793300 FN-296 Single Base Substitution A-T INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-309.SNP.5:4794379 chr05:004794379 0 W/4794379-4794379 FN-309 Single Base Substitution C-T INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-189.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN-189 Single Base Substitution C-T INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-327.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN-327 Single Base Substitution C-T INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1403-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN1403-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1673-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.831365;DP=3691;DP4=1876,1772,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23014e-09;MQSB=0.734148;RPB=0.99896;SGB=36.2493;VDB=0.722787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.991224;DP=3888;DP4=1931,1873,30,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.24356e-31;MQSB=0.947656;RPB=0.799655;SGB=1.86015;VDB=0.89015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN2187-S SNP C -> T AC=2;AN=190;BQB=0.529579;DP=4887;DP4=2363,2231,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000409249;MQB=5.237e-17;MQSB=0.740435;RPB=0.952624;SGB=100.07;VDB=0.831307;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN337-S Single Base Substitution C-T INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3937-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.451018;DP=2607;DP4=1255,1262,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.17818e-05;MQSB=0.9505;RPB=0.85224;SGB=47.0672;VDB=0.859771;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.5:4794471 chr05:004794471 0 W/4794471-4794471 FN819-S Single Base Substitution C-T INTERGENIC HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2437.SNP.5:4794713 chr05:004794713 0 W/4794713-4794713 FN2437 SNP G -> A AC=2;AN=200;BQB=0.718372;DP=4495;DP4=1983,2222,28,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.67545e-28;MQSB=0.982883;RPB=0.953077;SGB=162.845;VDB=0.863859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.5:4797266 chr05:004797266 0 W/4797266-4797266 FN3345-S SNP A -> T AC=2;AN=184;BQB=0.394002;DP=2634;DP4=1223,1258,8,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.92635e-10;MQSB=0.973317;RPB=0.997535;SGB=-13.1487;VDB=0.34065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.5:4797768 chr05:004797768 0 W/4797768-4797768 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2612-S.SNP.5:4803777 chr05:004803777 0 W/4803777-4803777 FN2612-S SNP T -> C AC=1;AN=198;BQB=0.996267;DP=4442;DP4=2203,1995,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.00315173;MQB=0.101259;MQSB=0.297611;RPB=1;SGB=-7.28946;VDB=0.886348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.5:4807141 chr05:004807141 0 W/4807141-4807141 FN2494 SNP A -> C AC=1;AN=200;BQB=0.357123;DP=4500;DP4=2029,2169,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35206e-12;MQSB=0.810338;RPB=0.821158;SGB=76.3213;VDB=0.0789269;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.5:4815373 chr05:004815373 0 W/4815373-4815373 FN957-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN3723-S.SNP.5:4818196 chr05:004818196 0 W/4818196-4818196 FN3723-S SNP A -> T AC=1;AN=190;BQB=0.769356;DP=2733;DP4=1258,1416,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.55022e-09;MQSB=0.458576;RPB=0.921495;SGB=53.8699;VDB=0.647802;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.5:4824578 chr05:004824578 0 W/4824578-4824578 FN810-S Single Base Substitution G-A INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2577-S.SNP.5:4835900 chr05:004835900 0 W/4835900-4835900 FN2577-S SNP A -> G AC=1;AN=198;BQB=0.9891;DP=4066;DP4=2157,1675,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.15472e-08;MQSB=0.959114;RPB=0.652383;SGB=40.149;VDB=0.873613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.5:4838390 chr05:004838390 0 W/4838390-4838390 FN2139-S SNP G -> A AC=2;AN=168;BQB=0.409198;DP=3489;DP4=1743,1684,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.06098e-11;MQSB=0.961091;RPB=0.627961;SGB=-172.886;VDB=0.299299;EFF=INTRON(MODIFIER||||327|LOC_Os05g08800|protein_coding|CODING|LOC_Os05g08800.1|2|1) FN1089-S.SNP.5:4840549 chr05:004840549 0 W/4840549-4840549 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN3720-S.SNP.5:4840778 chr05:004840778 0 W/4840778-4840778 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.939348;DP=2705;DP4=1224,1381,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12377e-05;MQSB=0.978403;RPB=0.368345;SGB=25.439;VDB=0.0919998;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.5:4843956 chr05:004843956 0 W/4843956-4843956 FN4135-S SNP C -> A AC=2;AN=182;BQB=0.888664;DP=2725;DP4=1405,1212,19,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.04829e-24;MQSB=0.921344;RPB=0.983435;SGB=80.8939;VDB=0.552517;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.5:4843957 chr05:004843957 0 W/4843957-4843957 FN4135-S SNP G -> A AC=2;AN=182;BQB=0.333602;DP=2722;DP4=1405,1221,19,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.36927e-24;MQSB=0.924159;RPB=0.641096;SGB=123.399;VDB=0.471037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.5:4844893 chr05:004844893 0 W/4844893-4844893 FN2422 SNP G -> A AC=1;AN=200;BQB=0.816288;DP=4926;DP4=2256,2268,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42367e-14;MQSB=0.71956;RPB=0.803561;SGB=79.9264;VDB=0.9568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.5:4845098 chr05:004845098 0 W/4845098-4845098 FN3520-S SNP T -> A AC=1;AN=188;BQB=0.932222;DP=2820;DP4=1366,1374,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.64899e-07;MQSB=0.953635;RPB=0.463062;SGB=25.3545;VDB=0.0335854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.5:4845815 chr05:004845815 0 W/4845815-4845815 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.983336;DP=3135;DP4=1581,1447,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01999e-10;MQSB=0.868738;RPB=0.938046;SGB=75.8731;VDB=0.306897;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.5:4846442 chr05:004846442 0 W/4846442-4846442 FN-146 Single Base Substitution C-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. W423-5-1.SNP.5:4847597 chr05:004847597 0 W/4847597-4847597 W423-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN581-S.SNP.5:4847975 chr05:004847975 0 W/4847975-4847975 FN581-S Single Base Substitution G-A INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN504-S.SNP.5:4851916 chr05:004851916 0 W/4851916-4851916 FN504-S Single Base Substitution G-A INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN391-S.SNP.5:4862221 chr05:004862221 0 W/4862221-4862221 FN391-S Single Base Substitution A-G INTRON HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3388-S.SNP.5:4865390 chr05:004865390 0 W/4865390-4865390 FN3388-S SNP G -> T AC=2;AN=184;BQB=0.456625;DP=2957;DP4=1444,1394,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.41243e-15;MQSB=0.872552;RPB=0.481244;SGB=106.184;VDB=0.00533841;EFF=UTR_5_PRIME(MODIFIER||89||814|LOC_Os05g08810|protein_coding|CODING|LOC_Os05g08810.1|1|1),UTR_5_PRIME(MODIFIER||89||625|LOC_Os05g08810|protein_coding|CODING|LOC_Os05g08810.2|1|1) FN3773-S.SNP.5:4867338 chr05:004867338 0 W/4867338-4867338 FN3773-S SNP T -> A AC=1;AN=190;BQB=0.992036;DP=2355;DP4=1123,1173,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0089e-06;MQSB=0.990405;RPB=0.997907;SGB=35.4339;VDB=0.490055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.5:4870551 chr05:004870551 0 W/4870551-4870551 FN2328 SNP T -> A AC=1;AN=192;BQB=0.999947;DP=4802;DP4=1980,2396,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.27179e-13;MQSB=0.490565;RPB=0.112505;SGB=89.6809;VDB=0.374478;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.5:4879746 chr05:004879746 0 W/4879746-4879746 FN704-S Single Base Substitution C-T INTRON HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2086-S.SNP.5:4881131 chr05:004881131 0 W/4881131-4881131 FN2086-S SNP T -> C AC=2;AN=168;BQB=0.998261;DP=4166;DP4=2136,1930,38,39;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.60537e-38;MQSB=0.964084;RPB=0.0266069;SGB=-57.221;VDB=0.172665;EFF=INTRON(MODIFIER||||853|LOC_Os05g08840|protein_coding|CODING|LOC_Os05g08840.1|5|1) FN530-S.SNP.5:4882662 chr05:004882662 0 W/4882662-4882662 FN530-S Single Base Substitution T-A INTRON HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN1596-S.SNP.5:4889555 chr05:004889555 0 W/4889555-4889555 FN1596-S Single Base Substitution A-G INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2264-S.SNP.5:4896989 chr05:004896989 0 W/4896989-4896989 FN2264-S SNP A -> T AC=1;AN=190;BQB=0.977888;DP=4897;DP4=2328,2232,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.33485e-08;MQSB=0.966913;RPB=0.758509;SGB=8.77275;VDB=0.755711;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.5:4898749 chr05:004898749 0 W/4898749-4898749 FN725-S Single Base Substitution C-A INTERGENIC HOMO SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN3844-S.SNP.5:4900078 chr05:004900078 0 W/4900078-4900078 FN3844-S SNP A -> C AC=1;AN=190;BQB=0.617229;DP=2837;DP4=1328,1386,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.012337;MQB=0.000468748;MQSB=0.0350118;RPB=0.686308;SGB=32.5467;VDB=0.909112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V811G|1109|LOC_Os05g08870|protein_coding|CODING|LOC_Os05g08870.1|4|1) FN2596-S.SNP.5:4902799 chr05:004902799 0 W/4902799-4902799 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.687473;DP=4160;DP4=2017,1900,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.5519e-07;MQSB=0.908522;RPB=0.999315;SGB=24.1541;VDB=0.908301;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F94|1109|LOC_Os05g08870|protein_coding|CODING|LOC_Os05g08870.1|1|1) FN1002-S.SNP.5:4905207 chr05:004905207 0 W/4905207-4905207 FN1002-S Single Base Substitution C-T INTRON HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN4152-S.SNP.5:4908772 chr05:004908772 0 W/4908772-4908772 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.999613;DP=2217;DP4=1132,1002,12,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0022553;MQB=3.12258e-05;MQSB=0.860982;RPB=0.175118;SGB=52.0913;VDB=0.619524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G158D|443|LOC_Os05g08880|protein_coding|CODING|LOC_Os05g08880.1|3|1) FN2291.SNP.5:4912377 chr05:004912377 0 W/4912377-4912377 FN2291 SNP A -> T AC=1;AN=192;BQB=0.994846;DP=4842;DP4=1995,2638,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42721e-09;MQSB=0.697001;RPB=0.44969;SGB=31.4783;VDB=0.723792;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.5:4914848 chr05:004914848 0 W/4914848-4914848 FN2083-S SNP A -> C AC=1;AN=168;BQB=0.121485;DP=4147;DP4=1955,1957,53,163;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00988667;MQB=0;MQSB=0.042131;RPB=9.67512e-06;SGB=-3064.84;VDB=3.09407e-10;EFF=INTRON(MODIFIER||||810|LOC_Os05g08890|protein_coding|CODING|LOC_Os05g08890.1|1|1) FN343-S.SNP.5:4919503 chr05:004919503 0 W/4919503-4919503 FN343-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g08890 transposable element protein, putative, containing Pfam profile: PF03108, MuDR, expressed SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN-157.SNP.5:4928345 chr05:004928345 0 W/4928345-4928345 FN-157 Single Base Substitution A-C INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.5:4928346 chr05:004928346 0 W/4928346-4928346 FN-157 Single Base Substitution G-T INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN1310-S.SNP.5:4932824 chr05:004932824 0 W/4932824-4932824 FN1310-S Single Base Substitution T-C INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1310-S.SNP.5:4932828 chr05:004932828 0 W/4932828-4932828 FN1310-S Single Base Substitution G-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN924-S.SNP.5:4938222 chr05:004938222 0 W/4938222-4938222 FN924-S Single Base Substitution T-C INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2532-S.SNP.5:4948002 chr05:004948002 0 W/4948002-4948002 FN2532-S SNP T -> C AC=1;AN=198;BQB=0.91473;DP=3745;DP4=1836,1778,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.57633e-08;MQSB=0.949909;RPB=0.783147;SGB=58.7391;VDB=0.570811;EFF=UTR_3_PRIME(MODIFIER||43||261|LOC_Os05g08950|protein_coding|CODING|LOC_Os05g08950.1|3|1) FN2233-S.SNP.5:4954920 chr05:004954920 0 W/4954920-4954920 FN2233-S SNP G -> T AC=2;AN=190;BQB=0.255393;DP=2445;DP4=848,1414,6,7;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0159509;MQB=0.36829;MQSB=9.78293e-21;RPB=0.440521;SGB=53.6492;VDB=0.824937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.5:4955145 chr05:004955145 0 W/4955145-4955145 FN1332-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1332-S.SNP.5:4955148 chr05:004955148 0 W/4955148-4955148 FN1332-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3301-S.SNP.5:4955780 chr05:004955780 0 W/4955780-4955780 FN3301-S SNP T -> C AC=1;AN=184;BQB=0.567902;DP=2515;DP4=1237,1122,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00119284;MQB=8.94524e-06;MQSB=0.000920199;RPB=0.439186;SGB=-13.6704;VDB=0.420125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.5:4959302 chr05:004959302 0 W/4959302-4959302 FN-344 Single Base Substitution A-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3302-S.SNP.5:4966051 chr05:004966051 0 W/4966051-4966051 FN3302-S SNP G -> T AC=1;AN=184;BQB=0.97929;DP=3047;DP4=1194,1756,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.65932e-07;MQSB=0.381659;RPB=0.895456;SGB=13.188;VDB=0.456466;EFF=INTRON(MODIFIER||||640|LOC_Os05g08970|protein_coding|CODING|LOC_Os05g08970.1|1|1) FN-315.SNP.5:4996872 chr05:004996872 0 W/4996872-4996872 FN-315 Single Base Substitution T-A INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2280-S.SNP.5:4999906 chr05:004999906 0 W/4999906-4999906 FN2280-S SNP T -> C AC=1;AN=190;BQB=0.130236;DP=4864;DP4=2218,2370,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205592;MQB=2.11666e-12;MQSB=0.358797;RPB=0.959601;SGB=25.8654;VDB=0.849869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.5:5007085 chr05:005007085 0 W/5007085-5007085 FN1505-S Single Base Substitution A-G INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3387-S.SNP.5:5008305 chr05:005008305 0 W/5008305-5008305 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.999701;DP=3527;DP4=1745,1682,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.132407;MQB=0.278892;MQSB=0;RPB=0.823839;SGB=48.7425;VDB=0.609329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.5:5012544 chr05:005012544 0 W/5012544-5012544 FN3890-S SNP T -> A AC=1;AN=158;BQB=0.862732;DP=2562;DP4=1355,1010,14,19;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.069477;MQB=0.146199;MQSB=3.89884e-12;RPB=0.564065;SGB=64.0993;VDB=0.715524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.5:5015179 chr05:005015179 0 W/5015179-5015179 FN1152-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g09040 transposon protein, putative, unclassified, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1048-S.SNP.5:5016518 chr05:005016518 0 W/5016518-5016518 FN1048-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g09040 transposon protein, putative, unclassified, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1053-S.SNP.5:5019033 chr05:005019033 0 W/5019033-5019033 FN1053-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g09040 transposon protein, putative, unclassified, expressed SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN399-S.SNP.5:5021075 chr05:005021075 0 W/5021075-5021075 FN399-S Single Base Substitution G-A INTERGENIC HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2237-S.SNP.5:5021329 chr05:005021329 0 W/5021329-5021329 FN2237-S SNP G -> A AC=2;AN=190;BQB=0.999863;DP=5238;DP4=2420,2419,17,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.98925e-19;MQSB=0.756319;RPB=0.478547;SGB=-90.6878;VDB=0.359852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.5:5021594 chr05:005021594 0 W/5021594-5021594 FN3412-S SNP T -> A AC=1;AN=184;BQB=0.908069;DP=3041;DP4=1507,1458,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61913e-08;MQSB=0.988221;RPB=0.475467;SGB=53.2642;VDB=0.876614;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.5:5029615 chr05:005029615 0 W/5029615-5029615 FN1483-S Single Base Substitution G-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1753-S.SNP.5:5035872 chr05:005035872 0 W/5035872-5035872 FN1753-S SNP C -> T AC=2;AN=188;BQB=0.59963;DP=2888;DP4=1141,1695,17,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.39687e-18;MQSB=0.698539;RPB=0.751533;SGB=-142.945;VDB=0.55449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.5:5038012 chr05:005038012 0 W/5038012-5038012 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.99995;DP=3934;DP4=1632,2062,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.110574;MQB=0.999158;MQSB=1.30505e-31;RPB=0.778636;SGB=83.2905;VDB=0.858829;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L79|1046|LOC_Os05g09070|protein_coding|CODING|LOC_Os05g09070.1|1|1) FN2265-S.SNP.5:5038143 chr05:005038143 0 W/5038143-5038143 FN2265-S SNP T -> C AC=1;AN=190;BQB=0.983511;DP=4129;DP4=1927,1600,23,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.73874e-14;MQSB=0.393026;RPB=0.99519;SGB=74.7373;VDB=0.419464;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V123A|1046|LOC_Os05g09070|protein_coding|CODING|LOC_Os05g09070.1|1|1) FN2126-S.SNP.5:5041205 chr05:005041205 0 W/5041205-5041205 FN2126-S SNP C -> T AC=1;AN=168;BQB=0.549845;DP=2086;DP4=1346,707,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=31;MQ0F=0.16443;MQB=0.681651;MQSB=0;RPB=0.922442;SGB=45.0404;VDB=0.702728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.5:5059164 chr05:005059164 0 W/5059164-5059164 FN2360 SNP C -> G AC=2;AN=192;BQB=0.49562;DP=4605;DP4=1956,2303,22,16;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.0490771;MQB=9.0747e-08;MQSB=4.75454e-05;RPB=0.920327;SGB=167.883;VDB=0.498948;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.5:5062678 chr05:005062678 0 W/5062678-5062678 FN4111-S SNP T -> G AC=1;AN=182;BQB=0.980287;DP=3031;DP4=1516,1420,9,18;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0369515;MQB=0.00570241;MQSB=0.117041;RPB=0.809895;SGB=84.7797;VDB=0.852399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.5:5064534 chr05:005064534 0 W/5064534-5064534 FN2725-S SNP C -> G AC=1;AN=200;BQB=0.874076;DP=4977;DP4=2489,2187,10,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0518385;MQB=0.789298;MQSB=1.8645e-07;RPB=0.177576;SGB=24.2746;VDB=0.389034;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.5:5074170 chr05:005074170 0 W/5074170-5074170 FN-202 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g09110 retrotransposon protein, putative, unclassified, expressed SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3838-S.SNP.5:5074213 chr05:005074213 0 W/5074213-5074213 FN3838-S SNP G -> T AC=1;AN=190;BQB=0.737703;DP=3310;DP4=1461,1746,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0806646;MQB=0.995523;MQSB=4.41844e-05;RPB=0.991908;SGB=85.5263;VDB=0.215142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P32T|1333|LOC_Os05g09110|protein_coding|CODING|LOC_Os05g09110.1|1|1) FN3790-S.SNP.5:5075546 chr05:005075546 0 W/5075546-5075546 FN3790-S SNP T -> C AC=1;AN=190;BQB=0.999681;DP=2595;DP4=1231,1197,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53494e-06;MQSB=0.08869;RPB=0.911432;SGB=36.1006;VDB=0.419848;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.5:5078344 chr05:005078344 0 W/5078344-5078344 FN4229-S SNP G -> A AC=2;AN=170;BQB=0.472148;DP=2524;DP4=1154,1253,19,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.67055e-14;MQSB=0.998635;RPB=0.973601;SGB=93.4031;VDB=0.947854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.5:5079295 chr05:005079295 0 W/5079295-5079295 FN3511-S SNP T -> C AC=1;AN=188;BQB=0.905556;DP=2794;DP4=1359,1353,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.80295e-07;MQSB=0.948076;RPB=0.690255;SGB=39.8925;VDB=0.0581053;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.5:5087512 chr05:005087512 0 W/5087512-5087512 FN3673-S SNP C -> A AC=1;AN=190;BQB=0.727559;DP=2935;DP4=1454,1377,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42747e-07;MQSB=0.730369;RPB=0.951712;SGB=28.7675;VDB=0.624758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.5:5102273 chr05:005102273 0 W/5102273-5102273 FN2495 SNP C -> T AC=2;AN=198;BQB=0.184519;DP=1526;DP4=649,523,2,9;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00196592;MQB=0.0838767;MQSB=8.42129e-05;RPB=0.226563;SGB=-1.74624;VDB=0.12391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.5:5102273 chr05:005102273 0 W/5102273-5102273 FN3347-S SNP C -> T AC=2;AN=184;BQB=0.42555;DP=2546;DP4=1143,1236,13,9;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00117832;MQB=1.48064e-08;MQSB=0.0321706;RPB=0.993644;SGB=93.9603;VDB=0.460562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.5:5103576 chr05:005103576 0 W/5103576-5103576 FN2263-S SNP C -> G AC=1;AN=190;BQB=0.584643;DP=4765;DP4=2000,2410,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.127177;MQB=0.117974;MQSB=5.75263e-09;RPB=0.234577;SGB=19.6499;VDB=0.471319;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.5:5104850 chr05:005104850 0 W/5104850-5104850 FN961-S Single Base Substitution C-A INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-285.SNP.5:5108442 chr05:005108442 0 W/5108442-5108442 FN-285 Single Base Substitution A-G INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.5:5108442 chr05:005108442 0 W/5108442-5108442 FN1278-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN4087-S.SNP.5:5108442 chr05:005108442 0 W/5108442-5108442 FN4087-S SNP A -> G AC=2;AN=182;BQB=0.601653;DP=2535;DP4=1377,1103,15,3;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.38638e-10;MQSB=0.889154;RPB=0.722846;SGB=75.6874;VDB=0.373679;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.5:5108442 chr05:005108442 0 W/5108442-5108442 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN-204.SNP.5:5110639 chr05:005110639 0 W/5110639-5110639 FN-204 Single Base Substitution T-C INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN3566-S.SNP.5:5113763 chr05:005113763 0 W/5113763-5113763 FN3566-S SNP A -> T AC=1;AN=188;BQB=0.282865;DP=2940;DP4=1378,1342,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.51173e-06;MQSB=0.999319;RPB=0.831132;SGB=-12.8266;VDB=0.604286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.5:5118099 chr05:005118099 0 W/5118099-5118099 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.968631;DP=3110;DP4=1534,1475,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.2503e-05;MQSB=0.98118;RPB=0.749761;SGB=26.3271;VDB=0.0434956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.5:5120723 chr05:005120723 0 W/5120723-5120723 FN2575-S SNP T -> A AC=1;AN=198;BQB=0.95761;DP=4574;DP4=1974,2335,23,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.36433e-23;MQSB=0.985648;RPB=0.999458;SGB=96.8175;VDB=0.0819314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.5:5122021 chr05:005122021 0 W/5122021-5122021 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.97509;DP=2948;DP4=1372,1489,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000339213;MQB=5.41695e-05;MQSB=0.99874;RPB=0.996255;SGB=21.6609;VDB=0.5193;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.5:5122040 chr05:005122040 0 W/5122040-5122040 FN2262-S SNP C -> T AC=1;AN=190;BQB=0.0996215;DP=4748;DP4=2143,2225,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96598e-09;MQSB=0.927888;RPB=0.891709;SGB=90.0802;VDB=0.949163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.5:5139023 chr05:005139023 0 W/5139023-5139023 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.936206;DP=4520;DP4=2305,1918,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.21855e-19;MQSB=0.738214;RPB=0.762369;SGB=146.368;VDB=0.508398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.5:5147850 chr05:005147850 0 W/5147850-5147850 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4117-S.SNP.5:5147933 chr05:005147933 0 W/5147933-5147933 FN4117-S SNP G -> C AC=2;AN=182;BQB=0.927824;DP=2631;DP4=1247,1295,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.53027e-16;MQSB=0.850967;RPB=0.979611;SGB=111.774;VDB=0.24124;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.5:5150543 chr05:005150543 0 W/5150543-5150543 FN519-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g09210 expressed protein SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN-159.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN-159 Single Base Substitution C-A INTRON HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN-73.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN-73 Single Base Substitution C-A INTRON HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1480-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN1480-S Single Base Substitution C-A INTRON Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1533-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN1533-S Single Base Substitution C-A INTRON Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1723-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN1723-S SNP C -> A AC=1;AN=188;BQB=0.867943;DP=2274;DP4=1184,1052,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.37021e-05;MQSB=0.601952;RPB=0.678393;SGB=15.903;VDB=0.623477;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN2149-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN2149-S SNP C -> A AC=2;AN=168;BQB=0.343385;DP=2771;DP4=1406,1294,12,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.48073e-16;MQSB=0.906425;RPB=0.826142;SGB=89.641;VDB=0.972705;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN2195-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN2195-S SNP C -> A AC=2;AN=190;BQB=0.226235;DP=4229;DP4=2018,1822,23,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.38142e-12;MQSB=0.989733;RPB=0.574177;SGB=64.5217;VDB=0.62947;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN2322.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN2322 SNP C -> A AC=1;AN=192;BQB=0.993303;DP=4286;DP4=2114,1834,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95401e-10;MQSB=0.809793;RPB=0.945874;SGB=-11.3826;VDB=0.742132;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN2411.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN2411 SNP C -> A AC=2;AN=200;BQB=0.919342;DP=3888;DP4=1920,1670,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.16837e-20;MQSB=0.944607;RPB=0.43565;SGB=130.399;VDB=0.0106787;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN2675-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN2675-S SNP C -> A AC=2;AN=200;BQB=0.695315;DP=4300;DP4=2136,1828,26,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.19913e-24;MQSB=0.939187;RPB=0.963862;SGB=183.209;VDB=0.652902;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN3366-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN3366-S SNP C -> A AC=2;AN=184;BQB=0.307592;DP=2978;DP4=1620,1258,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16587e-12;MQSB=0.717073;RPB=0.98786;SGB=134.656;VDB=0.353406;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN3426-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN3426-S SNP C -> A AC=1;AN=184;BQB=0.998962;DP=2772;DP4=1392,1300,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.13288e-11;MQSB=0.555342;RPB=0.872461;SGB=84.9167;VDB=0.266887;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN3563-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN3563-S SNP C -> A AC=2;AN=188;BQB=0.796336;DP=2684;DP4=1364,1244,26,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.5814e-24;MQSB=0.999658;RPB=0.780338;SGB=180.734;VDB=0.654491;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN3948-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN3948-S SNP C -> A AC=2;AN=168;BQB=0.39653;DP=2531;DP4=1296,1110,22,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.93282e-18;MQSB=0.589867;RPB=0.414892;SGB=161.673;VDB=0.0398911;EFF=INTRON(MODIFIER||||740|LOC_Os05g09220|protein_coding|CODING|LOC_Os05g09220.1|1|1) FN461-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN461-S Single Base Substitution C-A INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN564-S.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 FN564-S Single Base Substitution C-A INTRON HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. W598-2-1.SNP.5:5154448 chr05:005154448 0 W/5154448-5154448 W598-2-1 Single Base Substitution C-A INTRON HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1029-S.SNP.5:5155508 chr05:005155508 0 W/5155508-5155508 FN1029-S Single Base Substitution A-G INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3693-S.SNP.5:5158033 chr05:005158033 0 W/5158033-5158033 FN3693-S SNP A -> G AC=1;AN=190;BQB=0.889028;DP=2860;DP4=1348,1314,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0213287;MQB=0.470374;MQSB=0.00262063;RPB=0.997403;SGB=30.8803;VDB=0.945084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M855T|1035|LOC_Os05g09230|protein_coding|CODING|LOC_Os05g09230.1|3|1) FN1069-S.SNP.5:5159719 chr05:005159719 0 W/5159719-5159719 FN1069-S Single Base Substitution A-G INTRON HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1327-S.SNP.5:5163619 chr05:005163619 0 W/5163619-5163619 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN1481-S.SNP.5:5169339 chr05:005169339 0 W/5169339-5169339 FN1481-S Single Base Substitution C-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN260-S.SNP.5:5169694 chr05:005169694 0 W/5169694-5169694 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN75-S-S.SNP.5:5170793 chr05:005170793 0 W/5170793-5170793 FN75-S-S SNP C -> T AC=1;AN=190;BQB=0.950622;DP=5120;DP4=2488,2322,23,13;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0210938;MQB=0.818658;MQSB=1.1558e-10;RPB=0.98091;SGB=117.84;VDB=0.101666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L30F|364|LOC_Os05g09250|protein_coding|CODING|LOC_Os05g09250.1|1|1) FN3308-S.SNP.5:5174689 chr05:005174689 0 W/5174689-5174689 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.55752;DP=2942;DP4=1329,1511,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00169952;MQB=1.62879e-07;MQSB=0.528254;RPB=0.987294;SGB=46.3132;VDB=0.917839;EFF=INTRON(MODIFIER||||378|LOC_Os05g09270|protein_coding|CODING|LOC_Os05g09270.1|1|1) FN2791-S.SNP.5:5176238 chr05:005176238 0 W/5176238-5176238 FN2791-S SNP C -> T AC=1;AN=186;BQB=0.995997;DP=3927;DP4=1981,1747,7,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000509295;MQB=3.27883e-09;MQSB=0.985149;RPB=0.970406;SGB=9.3494;VDB=0.0350653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.5:5176954 chr05:005176954 0 W/5176954-5176954 FN3110-S SNP T -> A AC=2;AN=184;BQB=0.99713;DP=3154;DP4=1239,1725,18,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.21775e-19;MQSB=0.989207;RPB=0.0212859;SGB=123.793;VDB=0.0580676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.5:5178196 chr05:005178196 0 W/5178196-5178196 FN1097-S Single Base Substitution C-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2539-S.SNP.5:5179547 chr05:005179547 0 W/5179547-5179547 FN2539-S SNP C -> T AC=1;AN=186;BQB=0.788481;DP=3909;DP4=1934,1790,12,12;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.31841e-15;MQSB=0.658171;RPB=0.926004;SGB=76.1002;VDB=0.188253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.5:5188515 chr05:005188515 0 W/5188515-5188515 FN1197-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os05g09280 AGAP006957-PA, putative, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-223.SNP.5:5190180 chr05:005190180 0 W/5190180-5190180 FN-223 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g09290 expressed protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-306.SNP.5:5190180 chr05:005190180 0 W/5190180-5190180 FN-306 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g09290 expressed protein SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1075-S.SNP.5:5190180 chr05:005190180 0 W/5190180-5190180 FN1075-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g09290 expressed protein SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2372.SNP.5:5199604 chr05:005199604 0 W/5199604-5199604 FN2372 SNP T -> C AC=1;AN=192;BQB=0.224273;DP=4839;DP4=2389,2129,10,23;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0117793;MQB=7.63015e-09;MQSB=2.29993e-07;RPB=0.995497;SGB=32.3844;VDB=0.390148;EFF=INTRON(MODIFIER||||885|LOC_Os05g09300|protein_coding|CODING|LOC_Os05g09300.1|2|1) FN1150-S.SNP.5:5207077 chr05:005207077 0 W/5207077-5207077 FN1150-S Single Base Substitution A-T INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN320-S.SNP.5:5207262 chr05:005207262 0 W/5207262-5207262 FN320-S Single Base Substitution T-G INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2676-S.SNP.5:5209376 chr05:005209376 0 W/5209376-5209376 FN2676-S SNP G -> T AC=1;AN=200;BQB=0.626762;DP=5070;DP4=2297,2531,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0101e-08;MQSB=0.969117;RPB=0.589953;SGB=54.2646;VDB=0.392027;EFF=INTRON(MODIFIER||||1249|LOC_Os05g09330|protein_coding|CODING|LOC_Os05g09330.1|1|1) FN2606-S.SNP.5:5224282 chr05:005224282 0 W/5224282-5224282 FN2606-S SNP C -> T AC=1;AN=186;BQB=0.300986;DP=4197;DP4=2221,1776,6,2;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.49404e-05;MQSB=0.923136;RPB=0.78288;SGB=31.1689;VDB=0.250098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.5:5224521 chr05:005224521 0 W/5224521-5224521 FN1557-S Single Base Substitution A-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN937-S.SNP.5:5230699 chr05:005230699 0 W/5230699-5230699 FN937-S Single Base Substitution T-G INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN463-S.SNP.5:5240822 chr05:005240822 0 W/5240822-5240822 FN463-S Single Base Substitution A-T INTRON HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2398.SNP.5:5243299 chr05:005243299 0 W/5243299-5243299 FN2398 SNP G -> A AC=1;AN=200;BQB=0.374502;DP=5138;DP4=2529,2303,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50528e-11;MQSB=0.984023;RPB=0.933958;SGB=-10.0844;VDB=0.564805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G527D|1382|LOC_Os05g09360|protein_coding|CODING|LOC_Os05g09360.1|7|1) FN2398.SNP.5:5243300 chr05:005243300 0 W/5243300-5243300 FN2398 SNP C -> A AC=1;AN=200;BQB=0.990421;DP=5141;DP4=2554,2235,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.15281e-14;MQSB=0.986635;RPB=0.91798;SGB=14.3054;VDB=0.382233;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G527|1382|LOC_Os05g09360|protein_coding|CODING|LOC_Os05g09360.1|7|1) FN-189.SNP.5:5244113 chr05:005244113 0 W/5244113-5244113 FN-189 Single Base Substitution C-T INTRON HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2293.SNP.5:5256182 chr05:005256182 0 W/5256182-5256182 FN2293 SNP G -> A AC=1;AN=192;BQB=0.651842;DP=5236;DP4=2834,2185,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14433e-13;MQSB=0.911003;RPB=0.857439;SGB=75.4235;VDB=0.140599;EFF=INTRON(MODIFIER||||421|LOC_Os05g09370|protein_coding|CODING|LOC_Os05g09370.1|7|1),INTRON(MODIFIER||||421|LOC_Os05g09370|protein_coding|CODING|LOC_Os05g09370.2|8|1),INTRON(MODIFIER||||421|LOC_Os05g09370|protein_coding|CODING|LOC_Os05g09370.4|7|1) FN1455-S.SNP.5:5260643 chr05:005260643 0 W/5260643-5260643 FN1455-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN4260-S.SNP.5:5271904 chr05:005271904 0 W/5271904-5271904 FN4260-S SNP A -> T AC=1;AN=170;BQB=0.681455;DP=1992;DP4=1169,714,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000535052;MQSB=0.999781;RPB=0.879657;SGB=34.5445;VDB=0.513454;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.5:5273020 chr05:005273020 0 W/5273020-5273020 CW-631-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN-180.SNP.5:5282875 chr05:005282875 0 W/5282875-5282875 FN-180 Single Base Substitution C-G INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN-180.SNP.5:5282877 chr05:005282877 0 W/5282877-5282877 FN-180 Single Base Substitution T-C INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. W427-1-1.SNP.5:5285562 chr05:005285562 0 W/5285562-5285562 W427-1-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2784-S.SNP.5:5289565 chr05:005289565 0 W/5289565-5289565 FN2784-S SNP C -> T AC=2;AN=198;BQB=0.913055;DP=3829;DP4=1772,1858,16,34;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=4.33499e-19;MQSB=0.67246;RPB=0.846281;SGB=224.163;VDB=0.288512;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.5:5295969 chr05:005295969 0 W/5295969-5295969 FN429-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-156.SNP.5:5296349 chr05:005296349 0 W/5296349-5296349 FN-156 Single Base Substitution A-G INTRON HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN266-S.SNP.5:5300312 chr05:005300312 0 W/5300312-5300312 FN266-S Single Base Substitution G-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-190.SNP.5:5305234 chr05:005305234 0 W/5305234-5305234 FN-190 Single Base Substitution C-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-190.SNP.5:5305235 chr05:005305235 0 W/5305235-5305235 FN-190 Single Base Substitution A-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2424.SNP.5:5312676 chr05:005312676 0 W/5312676-5312676 FN2424 SNP T -> A AC=1;AN=200;BQB=0.955726;DP=5580;DP4=2432,2876,5,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.43988e-06;MQSB=0.0231366;RPB=0.929554;SGB=26.8797;VDB=0.767095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.5:5317001 chr05:005317001 0 W/5317001-5317001 FN2729-S SNP A -> T AC=1;AN=200;BQB=0.428726;DP=5021;DP4=2419,2417,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23634e-13;MQSB=0.998777;RPB=0.738506;SGB=50.3263;VDB=0.758121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.5:5323220 chr05:005323220 0 W/5323220-5323220 FN3443-S SNP C -> A AC=1;AN=184;BQB=0.823661;DP=3167;DP4=1844,1184,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27731e-10;MQSB=0.999228;RPB=0.948824;SGB=66.8296;VDB=0.0842421;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.5:5323224 chr05:005323224 0 W/5323224-5323224 FN3443-S SNP C -> A AC=1;AN=184;BQB=0.740346;DP=3208;DP4=1935,1158,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10686e-10;MQSB=0.999417;RPB=0.753411;SGB=46.3132;VDB=0.0459823;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.5:5329098 chr05:005329098 0 W/5329098-5329098 FN458-S Single Base Substitution C-G INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN498-S.SNP.5:5330377 chr05:005330377 0 W/5330377-5330377 FN498-S Single Base Substitution C-T INTRON HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1642-S.SNP.5:5337886 chr05:005337886 0 W/5337886-5337886 FN1642-S Single Base Substitution C-T INTRON HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN956-S.SNP.5:5340352 chr05:005340352 0 W/5340352-5340352 FN956-S Single Base Substitution A-T INTRON HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1639-S.SNP.5:5342573 chr05:005342573 0 W/5342573-5342573 FN1639-S Single Base Substitution G-C INTERGENIC Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN4078-S.SNP.5:5345615 chr05:005345615 0 W/5345615-5345615 FN4078-S SNP G -> T AC=2;AN=182;BQB=0.945663;DP=1633;DP4=938,546,12,5;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=1.12721e-09;MQSB=0.00469718;RPB=0.963661;SGB=71.1765;VDB=0.16204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.5:5348894 chr05:005348894 0 W/5348894-5348894 FN1445-S Single Base Substitution C-T INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2332.SNP.5:5350567 chr05:005350567 0 W/5350567-5350567 FN2332 SNP C -> T AC=1;AN=192;BQB=0.266804;DP=4517;DP4=2269,1895,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.84937e-17;MQSB=0.795784;RPB=0.998785;SGB=-4.61041;VDB=0.721284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.5:5351419 chr05:005351419 0 W/5351419-5351419 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.0912256;DP=4334;DP4=1862,2161,8,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000230734;MQB=7.15719e-09;MQSB=3.02075e-06;RPB=0.763693;SGB=65.5058;VDB=0.271767;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.5:5352411 chr05:005352411 0 W/5352411-5352411 FN3651-S SNP T -> C AC=1;AN=190;BQB=0.891447;DP=3083;DP4=1337,1562,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06411e-08;MQSB=0.994399;RPB=0.829317;SGB=18.552;VDB=0.399768;EFF=INTRON(MODIFIER||||95|LOC_Os05g09510|protein_coding|CODING|LOC_Os05g09510.1|2|1) FN400-S.SNP.5:5353832 chr05:005353832 0 W/5353832-5353832 FN400-S Single Base Substitution T-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN4146-S.SNP.5:5354540 chr05:005354540 0 W/5354540-5354540 FN4146-S SNP A -> T AC=1;AN=170;BQB=0.985986;DP=2678;DP4=1501,952,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.29446e-06;MQSB=0.115239;RPB=0.706913;SGB=56.7575;VDB=0.867348;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.5:5357670 chr05:005357670 0 W/5357670-5357670 FN589-S Single Base Substitution A-T INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1210-S.SNP.5:5365121 chr05:005365121 0 W/5365121-5365121 FN1210-S Single Base Substitution G-C INTERGENIC HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN3899-S.SNP.5:5368791 chr05:005368791 0 W/5368791-5368791 FN3899-S SNP A -> T AC=2;AN=158;BQB=0.99989;DP=2159;DP4=986,1040,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.05814e-09;MQSB=0.978034;RPB=0.845658;SGB=50.9207;VDB=0.0298739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.5:5370435 chr05:005370435 0 W/5370435-5370435 FN1012-S Single Base Substitution G-T INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1012-S.SNP.5:5370436 chr05:005370436 0 W/5370436-5370436 FN1012-S Single Base Substitution C-T INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-362.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN-362 Single Base Substitution C-T INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1140-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN1140-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1459-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN1459-S Single Base Substitution C-T INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2103-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN2103-S SNP C -> T AC=2;AN=168;BQB=0.957161;DP=4300;DP4=2097,2126,28,25;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=2.29337e-12;MQSB=0.658589;RPB=0.918854;SGB=-287.418;VDB=0.256104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.932616;DP=4809;DP4=2328,2181,16,17;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0;MQB=3.91177e-06;MQSB=0.0513805;RPB=0.999794;SGB=146.368;VDB=0.269872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.892289;DP=2683;DP4=1231,1286,14,13;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0;MQB=0.00268226;MQSB=0.433396;RPB=0.537951;SGB=85.0529;VDB=0.950926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3801-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN3801-S SNP C -> T AC=2;AN=190;BQB=0.907391;DP=2345;DP4=981,1171,12,12;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0;MQB=9.47594e-05;MQSB=0.00388749;RPB=0.976225;SGB=103.742;VDB=0.694086;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN391-S Single Base Substitution C-T INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3942-S.SNP.5:5379369 chr05:005379369 0 W/5379369-5379369 FN3942-S SNP C -> T AC=2;AN=168;BQB=0.47881;DP=2245;DP4=967,1054,22,14;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0;MQB=8.45194e-05;MQSB=0.0580874;RPB=0.998836;SGB=126.516;VDB=0.844547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.5:5387648 chr05:005387648 0 W/5387648-5387648 FN2200-S SNP G -> T AC=1;AN=190;BQB=0.71525;DP=4912;DP4=2387,2138,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91995e-14;MQSB=0.999508;RPB=0.814689;SGB=54.3062;VDB=0.745482;EFF=INTERGENIC(MODIFIER||||||||||1) FN-9.SNP.5:5396235 chr05:005396235 0 W/5396235-5396235 FN-9 Single Base Substitution G-T STOP_GAINED Homo LOC_Os05g09550 Der1-like family domain containing protein, expressed SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN2797-S.SNP.5:5398187 chr05:005398187 0 W/5398187-5398187 FN2797-S SNP C -> A AC=1;AN=198;BQB=0.703546;DP=3950;DP4=2135,1499,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.36428e-05;MQSB=0.732749;RPB=0.447919;SGB=18.9639;VDB=0.708747;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.5:5420611 chr05:005420611 0 W/5420611-5420611 FN901-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3825-S.SNP.5:5421911 chr05:005421911 0 W/5421911-5421911 FN3825-S SNP G -> T AC=1;AN=190;BQB=0.973334;DP=2840;DP4=1193,1548,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.45434e-09;MQSB=0.999919;RPB=0.889296;SGB=36.1006;VDB=0.283476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.5:5425947 chr05:005425947 0 W/5425947-5425947 FN3306-S SNP T -> G AC=1;AN=184;BQB=0.985276;DP=2922;DP4=1408,1442,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.07044e-08;MQSB=0.995722;RPB=0.939752;SGB=48.7425;VDB=0.877004;EFF=INTRON(MODIFIER||||1116|LOC_Os05g09620|protein_coding|CODING|LOC_Os05g09620.1|2|1) FN3829-S.SNP.5:5428271 chr05:005428271 0 W/5428271-5428271 FN3829-S SNP C -> T AC=2;AN=190;BQB=0.999397;DP=2750;DP4=1229,1389,10,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000363636;MQB=3.26633e-09;MQSB=0.851523;RPB=0.736414;SGB=82.301;VDB=0.552964;EFF=INTRON(MODIFIER||||1116|LOC_Os05g09620|protein_coding|CODING|LOC_Os05g09620.1|8|1),INTRON(MODIFIER||||978|LOC_Os05g09620|protein_coding|CODING|LOC_Os05g09620.2|5|1) FN1366-S.SNP.5:5435539 chr05:005435539 0 W/5435539-5435539 FN1366-S Single Base Substitution C-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2625-S.SNP.5:5436814 chr05:005436814 0 W/5436814-5436814 FN2625-S SNP G -> T AC=1;AN=200;BQB=0.953774;DP=4473;DP4=1978,2222,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06088e-18;MQSB=0.998493;RPB=0.0373595;SGB=108.768;VDB=0.411683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.5:5443790 chr05:005443790 0 W/5443790-5443790 FN-121 Single Base Substitution A-T INTRON HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN852-S.SNP.5:5444859 chr05:005444859 0 W/5444859-5444859 FN852-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN597-S.SNP.5:5460532 chr05:005460532 0 W/5460532-5460532 FN597-S Single Base Substitution A-C INTRON HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN351-S.SNP.5:5469540 chr05:005469540 0 W/5469540-5469540 FN351-S Single Base Substitution G-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN3347-S.SNP.5:5471772 chr05:005471772 0 W/5471772-5471772 FN3347-S SNP G -> C AC=1;AN=184;BQB=0.985559;DP=3453;DP4=1799,1488,15,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62103e-16;MQSB=0.99943;RPB=0.225912;SGB=134.656;VDB=0.575831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.5:5475800 chr05:005475800 0 W/5475800-5475800 FN2734-S SNP G -> T AC=1;AN=200;BQB=0.163447;DP=5268;DP4=2372,2538,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38193e-16;MQSB=0.999857;RPB=0.9047;SGB=83.5316;VDB=0.891348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.5:5477668 chr05:005477668 0 W/5477668-5477668 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.998371;DP=5125;DP4=2702,2065,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4214e-11;MQSB=0.0324449;RPB=0.728847;SGB=95.7111;VDB=0.994466;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.5:5478141 chr05:005478141 0 W/5478141-5478141 FN-328 Single Base Substitution G-T INTERGENIC HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN-316.SNP.5:5479984 chr05:005479984 0 W/5479984-5479984 FN-316 Single Base Substitution A-T INTERGENIC HOMO SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3395-S.SNP.5:5480419 chr05:005480419 0 W/5480419-5480419 FN3395-S SNP T -> G AC=1;AN=184;BQB=0.979762;DP=3263;DP4=1511,1531,16,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.99205e-13;MQSB=0.959131;RPB=0.959349;SGB=17.4548;VDB=0.12109;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.5:5486749 chr05:005486749 0 W/5486749-5486749 FN3944-S SNP A -> G AC=1;AN=168;BQB=0.96057;DP=2439;DP4=987,1250,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.40453e-06;MQSB=0.912086;RPB=0.927525;SGB=17.3231;VDB=0.344457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.5:5486757 chr05:005486757 0 W/5486757-5486757 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.679573;DP=2418;DP4=1054,1235,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.62683e-09;MQSB=0.918828;RPB=0.933725;SGB=17.3231;VDB=0.056073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.5:5490529 chr05:005490529 0 W/5490529-5490529 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN3495-S.SNP.5:5492909 chr05:005492909 0 W/5492909-5492909 FN3495-S SNP A -> C AC=1;AN=188;BQB=0.996133;DP=3245;DP4=1532,1458,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17831e-10;MQSB=0.98278;RPB=0.975962;SGB=11.7114;VDB=0.456643;EFF=INTRON(MODIFIER||||629|LOC_Os05g09716|protein_coding|CODING|LOC_Os05g09716.1|3|1) FN3494-S.SNP.5:5496813 chr05:005496813 0 W/5496813-5496813 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.932811;DP=3339;DP4=1788,1452,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0356394;MQB=0.0445259;MQSB=0.793922;RPB=0.85715;SGB=39.699;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.5:5496915 chr05:005496915 0 W/5496915-5496915 FN3762-S SNP A -> T AC=1;AN=190;BQB=0.627838;DP=3077;DP4=958,1816,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0272993;MQB=0.142528;MQSB=0.923581;RPB=0.913326;SGB=-57.4269;VDB=0.564154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.5:5497616 chr05:005497616 0 W/5497616-5497616 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN4072-S.SNP.5:5497789 chr05:005497789 0 W/5497789-5497789 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.999991;DP=2871;DP4=1666,1108,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.59572e-07;MQSB=0.931496;RPB=0.683943;SGB=44.1115;VDB=0.173819;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.5:5497790 chr05:005497790 0 W/5497790-5497790 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.996974;DP=2872;DP4=1672,1089,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.41413e-06;MQSB=0.928593;RPB=0.811332;SGB=35.0899;VDB=0.3298;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.5:5497791 chr05:005497791 0 W/5497791-5497791 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.99419;DP=2866;DP4=1656,1129,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.3847e-07;MQSB=0.903882;RPB=0.547866;SGB=39.6007;VDB=0.125735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.5:5498994 chr05:005498994 0 W/5498994-5498994 FN1600-S Single Base Substitution A-T INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2139-S.SNP.5:5505943 chr05:005505943 0 W/5505943-5505943 FN2139-S SNP G -> A AC=1;AN=168;BQB=0.946924;DP=1957;DP4=1036,879,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3024e-05;MQSB=0.998023;RPB=0.120594;SGB=24.4556;VDB=0.467235;EFF=INTRON(MODIFIER||||233|LOC_Os05g09720|protein_coding|CODING|LOC_Os05g09720.1|3|1) FN2618-S.SNP.5:5506449 chr05:005506449 0 W/5506449-5506449 FN2618-S SNP G -> A AC=1;AN=198;BQB=1;DP=3662;DP4=1709,1772,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.62248e-09;MQSB=0.791219;RPB=0.0929374;SGB=-38.26;VDB=0.0629862;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A201|233|LOC_Os05g09720|protein_coding|CODING|LOC_Os05g09720.1|4|1) FN3424-S.SNP.5:5508727 chr05:005508727 0 W/5508727-5508727 FN3424-S SNP A -> G AC=1;AN=184;BQB=0.986569;DP=2742;DP4=1378,1282,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.72486e-07;MQSB=0.922383;RPB=0.935079;SGB=32.2261;VDB=0.646266;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y248H|250|LOC_Os05g09724|protein_coding|CODING|LOC_Os05g09724.1|2|1) FN1330-S.SNP.5:5512492 chr05:005512492 0 W/5512492-5512492 FN1330-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g09728 expressed protein SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3393-S.SNP.5:5513531 chr05:005513531 0 W/5513531-5513531 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.980953;DP=3508;DP4=1892,1514,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33795e-11;MQSB=0.897538;RPB=0.413337;SGB=60.4004;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.5:5521975 chr05:005521975 0 W/5521975-5521975 FN1421-S Single Base Substitution G-T INTRON HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN810-S.SNP.5:5524760 chr05:005524760 0 W/5524760-5524760 FN810-S Single Base Substitution C-A INTRON HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN584-S.SNP.5:5525238 chr05:005525238 0 W/5525238-5525238 FN584-S Single Base Substitution T-A INTRON HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN420-S.SNP.5:5526584 chr05:005526584 0 W/5526584-5526584 FN420-S Single Base Substitution G-T INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN1665-S.SNP.5:5527300 chr05:005527300 0 W/5527300-5527300 FN1665-S Single Base Substitution G-T INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2096-S.SNP.5:5529069 chr05:005529069 0 W/5529069-5529069 FN2096-S SNP T -> A AC=2;AN=168;BQB=0.98654;DP=3738;DP4=2138,1538,22,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.69792e-20;MQSB=0.933515;RPB=0.725878;SGB=-5.46373;VDB=0.465506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.5:5531429 chr05:005531429 0 W/5531429-5531429 FN3470-S SNP C -> G AC=1;AN=184;BQB=0.954167;DP=2379;DP4=1278,1041,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.82919e-07;MQSB=0.999991;RPB=0.102004;SGB=25.1826;VDB=0.00855237;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.5:5533905 chr05:005533905 0 W/5533905-5533905 FN-87 Single Base Substitution G-T INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-87.SNP.5:5533906 chr05:005533906 0 W/5533906-5533906 FN-87 Single Base Substitution A-T INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1412-S.SNP.5:5536199 chr05:005536199 0 W/5536199-5536199 FN1412-S Single Base Substitution G-T INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN723-S.SNP.5:5536791 chr05:005536791 0 W/5536791-5536791 FN723-S Single Base Substitution C-T INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN4037-S.SNP.5:5547636 chr05:005547636 0 W/5547636-5547636 FN4037-S SNP G -> A AC=1;AN=168;BQB=0.48654;DP=2487;DP4=1256,1127,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.73103e-05;MQSB=0.952676;RPB=0.487245;SGB=52.1728;VDB=0.453757;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.5:5547877 chr05:005547877 0 W/5547877-5547877 FN1198-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1561-S.SNP.5:5556666 chr05:005556666 0 W/5556666-5556666 FN1561-S Single Base Substitution A-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2666-S.SNP.5:5559279 chr05:005559279 0 W/5559279-5559279 FN2666-S SNP T -> G AC=1;AN=200;BQB=0.761983;DP=3642;DP4=1272,2065,21,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000823723;MQB=1.76349e-10;MQSB=3.35285e-07;RPB=0.588611;SGB=-84.8123;VDB=0.719741;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.5:5576495 chr05:005576495 0 W/5576495-5576495 W246-5-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g10250 retrotransposon protein, putative, unclassified, expressed SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3562-S.SNP.5:5580721 chr05:005580721 0 W/5580721-5580721 FN3562-S SNP T -> C AC=2;AN=188;BQB=0.963082;DP=4040;DP4=1882,1916,20,25;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.00519802;MQB=0.00248001;MQSB=2.77996e-08;RPB=0.62089;SGB=50.2938;VDB=0.738539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E575G|961|LOC_Os05g10260|protein_coding|CODING|LOC_Os05g10260.1|3|1) FN654-S.SNP.5:5580745 chr05:005580745 0 W/5580745-5580745 FN654-S Single Base Substitution C-T SPLICE_SITE_ACCEPTOR HOMO LOC_Os05g10260 retrotransposon protein, putative, unclassified, expressed SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2361.SNP.5:5580840 chr05:005580840 0 W/5580840-5580840 FN2361 SNP C -> T AC=1;AN=192;BQB=0.865338;DP=4370;DP4=1950,2077,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000686499;MQB=0.000134344;MQSB=1.54065e-05;RPB=0.2897;SGB=64.7304;VDB=0.118982;EFF=SPLICE_SITE_REGION(LOW||||961|LOC_Os05g10260|protein_coding|CODING|LOC_Os05g10260.1|2|1),INTRON(MODIFIER||||961|LOC_Os05g10260|protein_coding|CODING|LOC_Os05g10260.1|2|1) FN_955-1.SNP.5:5581760 chr05:005581760 0 W/5581760-5581760 FN_955-1 Single Base Substitution C-A Homo LOC_Os05g10260 retrotransposon protein, putative, unclassified, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2458.SNP.5:5584529 chr05:005584529 0 W/5584529-5584529 FN2458 SNP C -> T AC=1;AN=200;BQB=0.87706;DP=5224;DP4=2496,2456,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09371e-12;MQSB=0.651135;RPB=0.0996731;SGB=61.9006;VDB=0.555058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.5:5585054 chr05:005585054 0 W/5585054-5585054 FN3494-S SNP G -> A AC=2;AN=184;BQB=0.917637;DP=2809;DP4=1235,1464,18,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.38041e-17;MQSB=0.944612;RPB=0.726629;SGB=61.1019;VDB=0.860701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.5:5585103 chr05:005585103 0 W/5585103-5585103 FN1089-S Single Base Substitution A-G INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2648-S.SNP.5:5594979 chr05:005594979 0 W/5594979-5594979 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.801786;DP=5036;DP4=2288,2424,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.01201e-18;MQSB=0.997279;RPB=0.88992;SGB=63.3521;VDB=0.386819;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.5:5596276 chr05:005596276 0 W/5596276-5596276 FN601-S Single Base Substitution G-A INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3362-S.SNP.5:5596579 chr05:005596579 0 W/5596579-5596579 FN3362-S SNP T -> C AC=1;AN=184;BQB=0.994676;DP=2553;DP4=741,1656,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.93369e-09;MQSB=0.999318;RPB=0.424123;SGB=5.28054;VDB=0.813301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.5:5598503 chr05:005598503 0 W/5598503-5598503 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.391721;DP=4046;DP4=2150,1482,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00321305;MQB=5.04968e-07;MQSB=9.97775e-24;RPB=0.802392;SGB=54.3062;VDB=0.254011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.5:5605827 chr05:005605827 0 W/5605827-5605827 FN2126-S SNP C -> A AC=1;AN=168;BQB=0.0654324;DP=3966;DP4=2104,1811,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2667e-06;MQSB=0.639327;RPB=0.0592509;SGB=8.48315;VDB=0.990987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P373T|726|LOC_Os05g10270|protein_coding|CODING|LOC_Os05g10270.1|9|1) FN3527-S.SNP.5:5610024 chr05:005610024 0 W/5610024-5610024 FN3527-S SNP T -> C AC=2;AN=188;BQB=0.24157;DP=2456;DP4=1180,1066,6,10;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00407166;MQB=0.000239895;MQSB=0.162249;RPB=0.858321;SGB=67.1521;VDB=0.86202;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.5:5612094 chr05:005612094 0 W/5612094-5612094 FN1689-S SNP C -> A AC=1;AN=188;BQB=0.851961;DP=4136;DP4=2046,2063,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0258704;MQB=0.492742;MQSB=2.05755e-05;RPB=0.402506;SGB=7.0815;VDB=0.708404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.5:5612189 chr05:005612189 0 W/5612189-5612189 FN3385-S SNP T -> C AC=1;AN=184;BQB=0.985;DP=2624;DP4=1263,1247,4,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000401006;MQSB=0.681825;RPB=0.274347;SGB=21.6146;VDB=0.503448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.5:5612190 chr05:005612190 0 W/5612190-5612190 FN3385-S SNP C -> G AC=1;AN=184;BQB=0.849476;DP=2630;DP4=1297,1272,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000116024;MQSB=0.831397;RPB=0.121676;SGB=26.1347;VDB=0.405339;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.5:5612458 chr05:005612458 0 W/5612458-5612458 FN1475-S Single Base Substitution T-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1329-S.SNP.5:5612844 chr05:005612844 0 W/5612844-5612844 FN1329-S Single Base Substitution A-G INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2730-S.SNP.5:5623503 chr05:005623503 0 W/5623503-5623503 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.967968;DP=3961;DP4=1485,2299,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.69814e-09;MQSB=0.946054;RPB=0.891421;SGB=58.8698;VDB=0.762846;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A125|223|LOC_Os05g10300|protein_coding|CODING|LOC_Os05g10300.1|1|1) FN690-S.SNP.5:5639031 chr05:005639031 0 W/5639031-5639031 FN690-S Single Base Substitution T-C INTRON HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN4179-S.SNP.5:5645446 chr05:005645446 0 W/5645446-5645446 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.689311;DP=2484;DP4=1095,1322,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.87183e-08;MQSB=0.999975;RPB=0.56623;SGB=38.3207;VDB=0.908118;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G373R|795|LOC_Os05g10340|protein_coding|CODING|LOC_Os05g10340.1|5|1) FN3652-S.SNP.5:5648731 chr05:005648731 0 W/5648731-5648731 FN3652-S SNP A -> G AC=1;AN=190;BQB=0.781273;DP=2745;DP4=1268,1313,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14912e-07;MQSB=0.885503;RPB=0.993782;SGB=49.0954;VDB=0.126318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.5:5652015 chr05:005652015 0 W/5652015-5652015 FN2091-S SNP T -> A AC=2;AN=168;BQB=0.361564;DP=3907;DP4=1923,1906,29,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.63518e-34;MQSB=0.958345;RPB=0.996923;SGB=-198.26;VDB=0.415457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.5:5652016 chr05:005652016 0 W/5652016-5652016 FN2091-S SNP T -> A AC=2;AN=168;BQB=0.858125;DP=3910;DP4=1919,1913,32,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.0212e-34;MQSB=0.958938;RPB=0.860418;SGB=65.7158;VDB=0.140698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.5:5652060 chr05:005652060 0 W/5652060-5652060 FN2091-S SNP G -> T AC=2;AN=168;BQB=0.701279;DP=3845;DP4=1792,1963,33,42;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.07757e-38;MQSB=0.996646;RPB=0.990746;SGB=-13.8676;VDB=0.511172;EFF=INTERGENIC(MODIFIER||||||||||1) FN540-S.SNP.5:5652870 chr05:005652870 0 W/5652870-5652870 FN540-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN2217-S.SNP.5:5653149 chr05:005653149 0 W/5653149-5653149 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.495227;DP=4192;DP4=2114,1825,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00023855;MQB=0.000376208;MQSB=0.999971;RPB=0.751983;SGB=15.9981;VDB=0.808889;EFF=UTR_3_PRIME(MODIFIER||1283||100|LOC_Os05g10370|protein_coding|CODING|LOC_Os05g10370.1|2|1) FN3937-S.SNP.5:5674208 chr05:005674208 0 W/5674208-5674208 FN3937-S SNP A -> C AC=1;AN=158;BQB=0.999794;DP=2162;DP4=1034,1041,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.29712e-08;MQSB=0.965918;RPB=0.942316;SGB=34.0735;VDB=0.400878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.5:5678636 chr05:005678636 0 W/5678636-5678636 FN3800-S SNP T -> C AC=1;AN=190;BQB=0.996608;DP=2629;DP4=1168,1361,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99883e-13;MQSB=0.907919;RPB=0.796736;SGB=44.0907;VDB=0.167647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.5:5679418 chr05:005679418 0 W/5679418-5679418 FN3693-S SNP A -> T AC=1;AN=190;BQB=0.989989;DP=2723;DP4=1258,1335,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06685e-05;MQSB=0.977768;RPB=0.996126;SGB=39.9877;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.5:5684523 chr05:005684523 0 W/5684523-5684523 FN923-S Single Base Substitution C-A INTRON HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN923-S.SNP.5:5684524 chr05:005684524 0 W/5684524-5684524 FN923-S Single Base Substitution C-G INTRON HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2652-S.SNP.5:5686918 chr05:005686918 0 W/5686918-5686918 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.894406;DP=5141;DP4=2400,2487,9,11;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0361797;MQB=0.110747;MQSB=9.68525e-15;RPB=0.96454;SGB=37.3004;VDB=0.879903;EFF=INTRON(MODIFIER||||781|LOC_Os05g10440|protein_coding|CODING|LOC_Os05g10440.1|7|1) FN-247.SNP.5:5688480 chr05:005688480 0 W/5688480-5688480 FN-247 Single Base Substitution T-A INTRON HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1453-S.SNP.5:5689295 chr05:005689295 0 W/5689295-5689295 FN1453-S Single Base Substitution G-A INTRON HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN797-S.SNP.5:5692639 chr05:005692639 0 W/5692639-5692639 FN797-S Single Base Substitution T-C INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2098-S.SNP.5:5692936 chr05:005692936 0 W/5692936-5692936 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.758244;DP=3508;DP4=1442,2026,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.78503e-13;MQSB=0.996691;RPB=0.875404;SGB=-12.3568;VDB=0.907018;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y297|330|LOC_Os05g10460|protein_coding|CODING|LOC_Os05g10460.1|3|1) FN3666-S.SNP.5:5697760 chr05:005697760 0 W/5697760-5697760 FN3666-S SNP T -> C AC=2;AN=190;BQB=0.938128;DP=3008;DP4=1480,1403,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.34343e-14;MQSB=0.962543;RPB=0.0621793;SGB=103.742;VDB=0.809898;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.5:5703705 chr05:005703705 0 W/5703705-5703705 FN4009-S SNP C -> T AC=1;AN=168;BQB=0.845297;DP=2822;DP4=1390,1288,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.92872e-08;MQSB=0.915505;RPB=0.515804;SGB=4.1907;VDB=0.674722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.5:5704301 chr05:005704301 0 W/5704301-5704301 FN1142-S Single Base Substitution A-G INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN-160.SNP.5:5704738 chr05:005704738 0 W/5704738-5704738 FN-160 Single Base Substitution T-G INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN3574-S.SNP.5:5705663 chr05:005705663 0 W/5705663-5705663 FN3574-S SNP A -> G AC=1;AN=188;BQB=0.940943;DP=2447;DP4=1092,1250,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000817327;MQB=0.00113434;MQSB=0.8713;RPB=0.892554;SGB=30.8063;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.5:5708906 chr05:005708906 0 W/5708906-5708906 FN997-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g10490 expressed protein SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN2330.SNP.5:5709228 chr05:005709228 0 W/5709228-5709228 FN2330 SNP C -> T AC=2;AN=192;BQB=0.439878;DP=4611;DP4=1686,2560,17,23;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=5.52955e-20;MQSB=1.37921e-07;RPB=0.760822;SGB=132.453;VDB=0.00967499;EFF=INTRON(MODIFIER||||110|LOC_Os05g10490|protein_coding|CODING|LOC_Os05g10490.1|4|1) FN-330.SNP.5:5711298 chr05:005711298 0 W/5711298-5711298 FN-330 Single Base Substitution T-G INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN4187-S.SNP.5:5724238 chr05:005724238 0 W/5724238-5724238 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.859456;DP=2053;DP4=948,1006,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000974184;MQB=0.000335433;MQSB=0.371179;RPB=0.57176;SGB=47.8722;VDB=0.338575;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P271|955|LOC_Os05g10530|protein_coding|CODING|LOC_Os05g10530.1|2|1) FN3323-S.SNP.5:5725651 chr05:005725651 0 W/5725651-5725651 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.605986;DP=3737;DP4=1759,1858,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00160557;MQB=0.000419639;MQSB=0.983898;RPB=0.404216;SGB=42.7914;VDB=0.443024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A711V|955|LOC_Os05g10530|protein_coding|CODING|LOC_Os05g10530.1|3|1) FN1402-S.SNP.5:5726055 chr05:005726055 0 W/5726055-5726055 FN1402-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g10530 retrotransposon protein, putative, unclassified, expressed SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN-335.SNP.5:5728893 chr05:005728893 0 W/5728893-5728893 FN-335 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g10540 retrotransposon protein, putative, unclassified, expressed SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1484-S.SNP.5:5733040 chr05:005733040 0 W/5733040-5733040 FN1484-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g10540 retrotransposon protein, putative, unclassified, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2423.SNP.5:5733647 chr05:005733647 0 W/5733647-5733647 FN2423 SNP A -> T AC=1;AN=200;BQB=0.725776;DP=4101;DP4=1910,1824,10,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0214582;MQB=6.21919e-06;MQSB=0.000141603;RPB=0.975102;SGB=65.5058;VDB=0.787532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.5:5734401 chr05:005734401 0 W/5734401-5734401 FN1094-S Single Base Substitution G-T INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-202.SNP.5:5738708 chr05:005738708 0 W/5738708-5738708 FN-202 Single Base Substitution C-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN790-S.SNP.5:5743321 chr05:005743321 0 W/5743321-5743321 FN790-S Single Base Substitution A-T INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3897-S.SNP.5:5745811 chr05:005745811 0 W/5745811-5745811 FN3897-S SNP G -> A AC=2;AN=158;BQB=0.639861;DP=2471;DP4=1239,1089,24,22;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=5.36068e-21;MQSB=0.28329;RPB=0.3862;SGB=190.29;VDB=0.669875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.5:5745963 chr05:005745963 0 W/5745963-5745963 FN3966-S SNP C -> T AC=2;AN=168;BQB=0.971875;DP=2810;DP4=1581,1118,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.18417e-12;MQSB=0.998379;RPB=0.485633;SGB=96.481;VDB=0.102008;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.5:5747031 chr05:005747031 0 W/5747031-5747031 FN427-S Single Base Substitution G-A INTERGENIC HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN941-S.SNP.5:5747247 chr05:005747247 0 W/5747247-5747247 FN941-S Single Base Substitution G-A INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2359.SNP.5:5754434 chr05:005754434 0 W/5754434-5754434 FN2359 SNP A -> G AC=1;AN=192;BQB=0.811258;DP=5314;DP4=2185,2769,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68265e-10;MQSB=0.994335;RPB=0.961599;SGB=34.0426;VDB=0.952023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.5:5757973 chr05:005757973 0 W/5757973-5757973 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.571838;DP=4756;DP4=2351,2201,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5051e-15;MQSB=0.834399;RPB=0.981996;SGB=83.5316;VDB=0.852439;EFF=INTRON(MODIFIER||||419|LOC_Os05g10580|protein_coding|CODING|LOC_Os05g10580.1|7|1) FN765-S.SNP.5:5758802 chr05:005758802 0 W/5758802-5758802 FN765-S Single Base Substitution A-C INTRON HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1497-S.SNP.5:5766959 chr05:005766959 0 W/5766959-5766959 FN1497-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1512-S.SNP.5:5767505 chr05:005767505 0 W/5767505-5767505 FN1512-S Single Base Substitution A-G INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2275-S.SNP.5:5769934 chr05:005769934 0 W/5769934-5769934 FN2275-S SNP C -> T AC=2;AN=190;BQB=0.632539;DP=2528;DP4=928,1274,30,32;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=2.12522e-21;MQSB=9.16695e-11;RPB=0.19454;SGB=266.579;VDB=0.0409513;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.5:5772308 chr05:005772308 0 W/5772308-5772308 FN420-S Single Base Substitution A-T INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN3854-S.SNP.5:5773569 chr05:005773569 0 W/5773569-5773569 FN3854-S SNP T -> C AC=2;AN=158;BQB=0.408057;DP=2614;DP4=1173,1343,8,25;HOB=0.024996;ICB=0.493752;MQ=40;MQ0F=0.0286917;MQB=0.99999;MQSB=0.834953;RPB=0.985477;SGB=101.462;VDB=0.560876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:5773931 chr05:005773931 0 W/5773931-5773931 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.147491;DP=4736;DP4=2097,2340,8,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0152027;MQB=4.48609e-07;MQSB=0.238206;RPB=0.983391;SGB=29.4849;VDB=0.905093;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.5:5774785 chr05:005774785 0 W/5774785-5774785 FN1221-S Single Base Substitution C-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN-225.SNP.5:5774900 chr05:005774900 0 W/5774900-5774900 FN-225 Single Base Substitution T-C INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3110-S.SNP.5:5774979 chr05:005774979 0 W/5774979-5774979 FN3110-S SNP C -> A AC=2;AN=184;BQB=0.942531;DP=3084;DP4=1713,1229,25,19;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.00972763;MQB=3.11237e-05;MQSB=0.00637286;RPB=0.689273;SGB=193.44;VDB=0.704165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.5:5775765 chr05:005775765 0 W/5775765-5775765 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.373214;DP=2659;DP4=1802,471,12,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00376081;MQB=0.000411682;MQSB=0;RPB=0.990865;SGB=43.8747;VDB=0.123839;EFF=INTERGENIC(MODIFIER||||||||||1) FN4302-S.SNP.5:5779965 chr05:005779965 0 W/5779965-5779965 FN4302-S SNP T -> C AC=1;AN=170;BQB=0.91744;DP=2678;DP4=1426,1131,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2622e-08;MQSB=0.861035;RPB=0.989257;SGB=41.7633;VDB=0.97304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.5:5790095 chr05:005790095 0 W/5790095-5790095 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.933365;DP=4731;DP4=2454,2077,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.93519e-12;MQSB=0.482079;RPB=0.57344;SGB=-12.5051;VDB=0.0278259;EFF=INTERGENIC(MODIFIER||||||||||1) FN977-S.SNP.5:5794295 chr05:005794295 0 W/5794295-5794295 FN977-S Single Base Substitution T-C INTRON HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN4113-S.SNP.5:5796148 chr05:005796148 0 W/5796148-5796148 FN4113-S SNP A -> T AC=2;AN=180;BQB=0.998127;DP=2753;DP4=1356,1271,30,23;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=8.47259e-29;MQSB=0.824125;RPB=0.924693;SGB=228.071;VDB=0.181291;EFF=INTRON(MODIFIER||||441|LOC_Os05g10630|protein_coding|CODING|LOC_Os05g10630.1|1|1) FN-82.SNP.5:5798417 chr05:005798417 0 W/5798417-5798417 FN-82 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g10640 hAT dimerisation domain-containing protein, putative, expressed SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2361.SNP.5:5799383 chr05:005799383 0 W/5799383-5799383 FN2361 SNP A -> C AC=1;AN=192;BQB=0.0570895;DP=4847;DP4=2270,2296,13,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.65876e-20;MQSB=0.993362;RPB=0.989889;SGB=107.503;VDB=0.926308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ctt|I275L|717|LOC_Os05g10640|protein_coding|CODING|LOC_Os05g10640.1|2|1) FN-117.SNP.5:5799478 chr05:005799478 0 W/5799478-5799478 FN-117 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN771-S.SNP.5:5809052 chr05:005809052 0 W/5809052-5809052 FN771-S Single Base Substitution T-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN771-S.SNP.5:5809053 chr05:005809053 0 W/5809053-5809053 FN771-S Single Base Substitution A-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2453.SNP.5:5823435 chr05:005823435 0 W/5823435-5823435 FN2453 SNP C -> A AC=1;AN=200;BQB=0.252014;DP=4889;DP4=2237,2132,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00239346;MQSB=0.398402;RPB=0.653241;SGB=13.8539;VDB=0.904869;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.5:5826522 chr05:005826522 0 W/5826522-5826522 FN3039-S SNP T -> C AC=1;AN=184;BQB=0.999309;DP=2655;DP4=1384,1182,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.98429e-11;MQSB=0.819162;RPB=0.334279;SGB=56.8786;VDB=0.823599;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.5:5840305 chr05:005840305 0 W/5840305-5840305 FN483-S Single Base Substitution G-A INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN483-S.SNP.5:5840306 chr05:005840306 0 W/5840306-5840306 FN483-S Single Base Substitution G-A INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN713-S.SNP.5:5841851 chr05:005841851 0 W/5841851-5841851 FN713-S Single Base Substitution T-A INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3681-S.SNP.5:5848463 chr05:005848463 0 W/5848463-5848463 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.886567;DP=1982;DP4=1068,795,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000504541;MQB=0.0026271;MQSB=1.88126e-07;RPB=0.596643;SGB=25.439;VDB=0.800627;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.5:5850668 chr05:005850668 0 W/5850668-5850668 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN631-S.SNP.5:5857186 chr05:005857186 0 W/5857186-5857186 FN631-S Single Base Substitution G-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2587-S.SNP.5:5857920 chr05:005857920 0 W/5857920-5857920 FN2587-S SNP A -> T AC=1;AN=198;BQB=0.790687;DP=3942;DP4=1665,1922,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.00163e-08;MQSB=0.65095;RPB=0.622373;SGB=-12.0504;VDB=0.231395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:5864684 chr05:005864684 0 W/5864684-5864684 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.779403;DP=4835;DP4=2190,2422,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0672e-14;MQSB=0.867081;RPB=0.814204;SGB=87.1368;VDB=0.441204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.5:5878648 chr05:005878648 0 W/5878648-5878648 FN1538-S Single Base Substitution C-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN4302-S.SNP.5:5879679 chr05:005879679 0 W/5879679-5879679 FN4302-S SNP C -> T AC=1;AN=170;BQB=0.969796;DP=2161;DP4=1054,1058,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.37838e-05;MQSB=0.995473;RPB=0.935411;SGB=17.6652;VDB=0.375922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.5:5884877 chr05:005884877 0 W/5884877-5884877 FN3834-S SNP G -> T AC=1;AN=190;BQB=0.985253;DP=2781;DP4=1366,1320,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65578e-09;MQSB=0.997271;RPB=0.979027;SGB=21.1058;VDB=0.934468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.5:5884879 chr05:005884879 0 W/5884879-5884879 FN3834-S SNP G -> T AC=1;AN=190;BQB=0.984854;DP=2786;DP4=1385,1313,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.90958e-08;MQSB=0.998541;RPB=0.9512;SGB=49.0954;VDB=0.856747;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.5:5898988 chr05:005898988 0 W/5898988-5898988 FN4132-S SNP G -> A AC=1;AN=182;BQB=0.999606;DP=3089;DP4=1630,1398,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0715e-09;MQSB=0.782816;RPB=0.182055;SGB=71.1765;VDB=0.758414;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.5:5900155 chr05:005900155 0 W/5900155-5900155 FN790-S Single Base Substitution A-T INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3790-S.SNP.5:5902858 chr05:005902858 0 W/5902858-5902858 FN3790-S SNP T -> G AC=1;AN=190;BQB=0.999998;DP=2429;DP4=954,1384,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.83956e-07;MQSB=0.520882;RPB=0.995454;SGB=36.1006;VDB=0.425466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.5:5903966 chr05:005903966 0 W/5903966-5903966 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.983794;DP=2688;DP4=1383,1205,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35205e-08;MQSB=0.934623;RPB=0.992016;SGB=49.0954;VDB=0.801464;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.5:5903973 chr05:005903973 0 W/5903973-5903973 FN3570-S SNP G -> C AC=1;AN=190;BQB=0.25237;DP=2699;DP4=1382,1219,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2774e-07;MQSB=0.924708;RPB=0.594127;SGB=53.6492;VDB=0.750486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.5:5907370 chr05:005907370 0 W/5907370-5907370 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.91228;DP=4564;DP4=2562,1772,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11384e-13;MQSB=0.987499;RPB=0.996343;SGB=39.9056;VDB=0.216827;EFF=INTERGENIC(MODIFIER||||||||||1) FN4145-S.SNP.5:5934885 chr05:005934885 0 W/5934885-5934885 FN4145-S SNP C -> A AC=1;AN=170;BQB=0.57323;DP=2223;DP4=1117,1037,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000106216;MQSB=0.981798;RPB=0.938353;SGB=21.1076;VDB=0.67338;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.5:5935632 chr05:005935632 0 W/5935632-5935632 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.880346;DP=5112;DP4=2489,2388,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17948e-11;MQSB=0.795652;RPB=0.997962;SGB=86.5007;VDB=0.45356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.5:5935997 chr05:005935997 0 W/5935997-5935997 FN3423-S SNP G -> A AC=2;AN=184;BQB=0.932756;DP=2944;DP4=1606,1239,11,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.30567e-12;MQSB=0.894101;RPB=0.512083;SGB=60.4004;VDB=0.638587;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.5:5936105 chr05:005936105 0 W/5936105-5936105 FN4166-S SNP T -> C AC=2;AN=170;BQB=0.872127;DP=2376;DP4=1104,1142,7,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.77956e-08;MQSB=0.991209;RPB=0.999905;SGB=70.0854;VDB=0.876701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.5:5936897 chr05:005936897 0 W/5936897-5936897 FN1715-S SNP A -> T AC=1;AN=188;BQB=0.479635;DP=3318;DP4=1163,1417,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0;MQB=0.00068919;MQSB=6.81115e-05;RPB=0.321443;SGB=-38.278;VDB=0.0463748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.5:5936897 chr05:005936897 0 W/5936897-5936897 FN3665-S SNP A -> T AC=1;AN=190;BQB=0.724413;DP=3069;DP4=1345,1323,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=9.29042e-11;MQSB=0.998846;RPB=0.534376;SGB=61.9679;VDB=0.191424;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.5:5938596 chr05:005938596 0 W/5938596-5938596 FN988-S Single Base Substitution T-C INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1255-S.SNP.5:5948143 chr05:005948143 0 W/5948143-5948143 FN1255-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN4096-S.SNP.5:5949106 chr05:005949106 0 W/5949106-5949106 FN4096-S SNP C -> T AC=1;AN=182;BQB=0.938714;DP=2683;DP4=1338,1271,4,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00020332;MQSB=0.999751;RPB=0.864469;SGB=21.56;VDB=0.578781;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.5:5949873 chr05:005949873 0 W/5949873-5949873 FN3496-S SNP C -> T AC=1;AN=188;BQB=0.952321;DP=2812;DP4=1163,1577,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.14712e-07;MQSB=0.954127;RPB=0.982506;SGB=48.979;VDB=0.270357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.5:5950879 chr05:005950879 0 W/5950879-5950879 FN2445 SNP A -> C AC=1;AN=200;BQB=0.81349;DP=5267;DP4=2436,2561,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22094e-07;MQSB=0.991375;RPB=0.961265;SGB=54.2646;VDB=0.642829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.5:5953513 chr05:005953513 0 W/5953513-5953513 FN3477-S SNP T -> A AC=1;AN=184;BQB=0.419983;DP=2485;DP4=1210,1163,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.00132596;MQSB=0.451189;RPB=0.985652;SGB=49.835;VDB=0.426385;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.5:5957906 chr05:005957906 0 W/5957906-5957906 FN597-S Single Base Substitution A-G INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-217.SNP.5:5958734 chr05:005958734 0 W/5958734-5958734 FN-217 Single Base Substitution T-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1596-S.SNP.5:5963950 chr05:005963950 0 W/5963950-5963950 FN1596-S Single Base Substitution A-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN3709-S.SNP.5:5971257 chr05:005971257 0 W/5971257-5971257 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.451423;DP=2683;DP4=1253,1336,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.14599e-06;MQSB=3.49545e-07;RPB=0.914797;SGB=7.21887;VDB=0.237226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.5:5972681 chr05:005972681 0 W/5972681-5972681 FN-141 Single Base Substitution T-A INTRON HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-141.SNP.5:5972695 chr05:005972695 0 W/5972695-5972695 FN-141 Single Base Substitution G-A INTRON HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3412-S.SNP.5:5983127 chr05:005983127 0 W/5983127-5983127 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.383061;DP=2996;DP4=1403,1490,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000333778;MQB=0.00189935;MQSB=0.979918;RPB=0.0277936;SGB=39.699;VDB=0.000340543;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.5:5998941 chr05:005998941 0 W/5998941-5998941 FN3772-S SNP A -> G AC=1;AN=190;BQB=0.996265;DP=3070;DP4=1536,1444,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55071e-08;MQSB=0.989322;RPB=0.285972;SGB=43.2083;VDB=0.261053;EFF=INTRON(MODIFIER||||556|LOC_Os05g10840|protein_coding|CODING|LOC_Os05g10840.1|3|1),INTRON(MODIFIER||||556|LOC_Os05g10840|protein_coding|CODING|LOC_Os05g10840.2|3|1) FN451-S.SNP.5:6001172 chr05:006001172 0 W/6001172-6001172 FN451-S Single Base Substitution T-A INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2356.SNP.5:6001621 chr05:006001621 0 W/6001621-6001621 FN2356 SNP C -> T AC=1;AN=192;BQB=0.214246;DP=4768;DP4=2241,2267,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.25848e-17;MQSB=0.999188;RPB=0.950494;SGB=86.1165;VDB=0.87108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.5:6001622 chr05:006001622 0 W/6001622-6001622 FN2356 SNP C -> A AC=1;AN=192;BQB=0.937763;DP=4788;DP4=2209,2248,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.21514e-15;MQSB=0.990715;RPB=0.827494;SGB=51.9931;VDB=0.858828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.5:6001865 chr05:006001865 0 W/6001865-6001865 FN2317 SNP C -> T AC=1;AN=192;BQB=0.662052;DP=4830;DP4=2473,2139,9,2;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.000200244;MQSB=0.00884857;RPB=0.767878;SGB=13.5279;VDB=0.034293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.5:6012010 chr05:006012010 0 W/6012010-6012010 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.989707;DP=4965;DP4=2352,2367,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.3866e-16;MQSB=0.983483;RPB=0.260638;SGB=109.527;VDB=0.388718;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.5:6013034 chr05:006013034 0 W/6013034-6013034 FN931-S Single Base Substitution C-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2446.SNP.5:6020472 chr05:006020472 0 W/6020472-6020472 FN2446 SNP G -> T AC=1;AN=200;BQB=0.855798;DP=3988;DP4=2024,1714,5,4;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0052658;MQB=0.140335;MQSB=0.012505;RPB=0.460115;SGB=22.2439;VDB=0.18147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R90L|1962|LOC_Os05g10870|protein_coding|CODING|LOC_Os05g10870.1|1|1) FN1175-S.SNP.5:6022541 chr05:006022541 0 W/6022541-6022541 FN1175-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g10870 retrotransposon protein, putative, unclassified, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1175-S.SNP.5:6022542 chr05:006022542 0 W/6022542-6022542 FN1175-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2706-S.SNP.5:6026366 chr05:006026366 0 W/6026366-6026366 FN2706-S SNP G -> T AC=1;AN=200;BQB=0.0540501;DP=4019;DP4=1734,2069,13,12;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.122916;MQB=6.53637e-05;MQSB=8.90705e-17;RPB=0.994789;SGB=20.7261;VDB=0.153832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.5:6026367 chr05:006026367 0 W/6026367-6026367 FN2706-S SNP G -> T AC=1;AN=200;BQB=0.930112;DP=4020;DP4=1736,2049,10,13;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.121891;MQB=3.61622e-05;MQSB=4.05878e-19;RPB=0.997159;SGB=45.1159;VDB=0.21319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.5:6026598 chr05:006026598 0 W/6026598-6026598 FN3363-S SNP A -> T AC=2;AN=184;BQB=0.867819;DP=3458;DP4=2007,1030,26,18;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0179294;MQB=6.52134e-05;MQSB=0.999528;RPB=0.621575;SGB=47.8906;VDB=0.0426515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.5:6031046 chr05:006031046 0 W/6031046-6031046 FN1708-S SNP G -> C AC=1;AN=188;BQB=0.0240274;DP=3808;DP4=1812,1966,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000119395;MQSB=0.976137;RPB=0.904167;SGB=-54.619;VDB=0.560746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.5:6031590 chr05:006031590 0 W/6031590-6031590 FN2289 SNP C -> T AC=1;AN=192;BQB=0.955889;DP=4960;DP4=2352,2311,10,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.24659e-16;MQSB=0.886711;RPB=0.995327;SGB=62.2505;VDB=0.688025;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.5:6038094 chr05:006038094 0 W/6038094-6038094 FN503-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os05g10890 retrotransposon protein, putative, unclassified, expressed SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2500.SNP.5:6038440 chr05:006038440 0 W/6038440-6038440 FN2500 SNP G -> A AC=1;AN=200;BQB=0.512615;DP=3585;DP4=1811,1457,10,8;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.00613668;MQB=0.18027;MQSB=0;RPB=0.954683;SGB=9.48993;VDB=0.841004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1415S|1679|LOC_Os05g10890|protein_coding|CODING|LOC_Os05g10890.1|1|1) FN2544-S.SNP.5:6043828 chr05:006043828 0 W/6043828-6043828 FN2544-S SNP T -> C AC=1;AN=198;BQB=0.997819;DP=4351;DP4=2043,2087,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.34699e-08;MQSB=0.985858;RPB=0.849274;SGB=77.1196;VDB=0.499286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.5:6045777 chr05:006045777 0 W/6045777-6045777 FN3039-S SNP C -> A AC=1;AN=184;BQB=0.91395;DP=3448;DP4=1729,1624,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.35456e-10;MQSB=0.932574;RPB=0.55557;SGB=53.3568;VDB=0.666221;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.5:6064266 chr05:006064266 0 W/6064266-6064266 FN772-S Single Base Substitution C-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1204-S.SNP.5:6064935 chr05:006064935 0 W/6064935-6064935 FN1204-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN3864-S.SNP.5:6072944 chr05:006072944 0 W/6072944-6072944 FN3864-S SNP C -> T AC=1;AN=158;BQB=0.999815;DP=1939;DP4=1006,855,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.92241e-08;MQSB=0.560993;RPB=0.696362;SGB=64.5449;VDB=0.498193;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.5:6075717 chr05:006075717 0 W/6075717-6075717 FN1687-S SNP A -> G AC=1;AN=188;BQB=0.699646;DP=3071;DP4=1400,1621,13,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.79458e-12;MQSB=0.874363;RPB=0.995043;SGB=-75.0128;VDB=0.0801328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.5:6080539 chr05:006080539 0 W/6080539-6080539 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.720049;DP=4058;DP4=1781,2069,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.325e-09;MQSB=0.00354057;RPB=0.844484;SGB=68.0801;VDB=0.178899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.5:6082585 chr05:006082585 0 W/6082585-6082585 FN3306-S SNP C -> T AC=1;AN=184;BQB=0.895647;DP=2720;DP4=1204,1384,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60021e-07;MQSB=0.768841;RPB=0.272464;SGB=44.2207;VDB=0.333578;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.5:6090932 chr05:006090932 0 W/6090932-6090932 FN980-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-185.SNP.5:6095206 chr05:006095206 0 W/6095206-6095206 FN-185 Single Base Substitution C-T INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2664-S.SNP.5:6096539 chr05:006096539 0 W/6096539-6096539 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.922646;DP=5082;DP4=2595,2195,23,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35575e-20;MQSB=0.976554;RPB=0.958513;SGB=119.583;VDB=0.678951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.5:6101006 chr05:006101006 0 W/6101006-6101006 FN2175-S SNP T -> C AC=2;AN=168;BQB=0.0346791;DP=4208;DP4=2031,2077,20,39;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.0853e-24;MQSB=0.989958;RPB=0.364212;SGB=-124.559;VDB=0.637495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.5:6101006 chr05:006101006 0 W/6101006-6101006 FN2536-S SNP T -> C AC=2;AN=198;BQB=0.903285;DP=3902;DP4=1723,1915,13,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.84476e-12;MQSB=0.892645;RPB=0.98649;SGB=18.9201;VDB=0.448241;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.5:6101006 chr05:006101006 0 W/6101006-6101006 FN4117-S SNP T -> C AC=2;AN=182;BQB=0.456824;DP=2595;DP4=1040,1414,8,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.79958e-14;MQSB=0.808212;RPB=0.705265;SGB=98.2417;VDB=0.0833146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.5:6107421 chr05:006107421 0 W/6107421-6107421 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.82326;DP=4284;DP4=2192,1850,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.57157e-05;MQSB=0.744146;RPB=0.394899;SGB=-15.026;VDB=0.108893;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.5:6114894 chr05:006114894 0 W/6114894-6114894 FN534-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g10950 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3865-S.SNP.5:6137256 chr05:006137256 0 W/6137256-6137256 FN3865-S SNP C -> T AC=1;AN=158;BQB=0.971937;DP=2450;DP4=1185,1177,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.88391e-11;MQSB=0.91155;RPB=0.555478;SGB=73.2838;VDB=0.521408;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.5:6137784 chr05:006137784 0 W/6137784-6137784 FN-169 Single Base Substitution A-C INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2729-S.SNP.5:6141914 chr05:006141914 0 W/6141914-6141914 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.321332;DP=4885;DP4=2379,2341,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25414e-14;MQSB=0.919415;RPB=0.495231;SGB=69.1109;VDB=0.767695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.5:6141915 chr05:006141915 0 W/6141915-6141915 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.916958;DP=4865;DP4=2343,2287,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9676e-15;MQSB=0.929293;RPB=0.452118;SGB=45.1159;VDB=0.874919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.5:6142040 chr05:006142040 0 W/6142040-6142040 FN2784-S SNP G -> T AC=2;AN=198;BQB=0.730338;DP=4303;DP4=2068,2002,26,19;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.75809e-18;MQSB=0.99871;RPB=0.94752;SGB=151.598;VDB=0.216832;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.5:6152162 chr05:006152162 0 W/6152162-6152162 FN3606-S SNP A -> G AC=2;AN=190;BQB=0.998604;DP=2698;DP4=1419,1120,8,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.2035e-08;MQSB=0.474881;RPB=0.134362;SGB=62.7569;VDB=0.612796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.5:6155985 chr05:006155985 0 W/6155985-6155985 FN1049-S Single Base Substitution C-T INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1916.SNP.5:6159045 chr05:006159045 0 W/6159045-6159045 FN1916 Single Base Substitution T-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN427-S.SNP.5:6162575 chr05:006162575 0 W/6162575-6162575 FN427-S Single Base Substitution G-A INTERGENIC HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-293.SNP.5:6163045 chr05:006163045 0 W/6163045-6163045 FN-293 Single Base Substitution T-C INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2204-S.SNP.5:6163800 chr05:006163800 0 W/6163800-6163800 FN2204-S SNP T -> A AC=1;AN=190;BQB=0.175912;DP=5450;DP4=2325,2838,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.75443e-21;MQSB=0.771118;RPB=0.0561828;SGB=153.834;VDB=0.145193;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.5:6173011 chr05:006173011 0 W/6173011-6173011 FN2380 SNP C -> T AC=1;AN=192;BQB=0.993343;DP=4882;DP4=2093,2399,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.32375e-06;MQSB=0.88319;RPB=0.966294;SGB=23.7852;VDB=0.909475;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.5:6176487 chr05:006176487 0 W/6176487-6176487 FN4030-S SNP A -> T AC=1;AN=168;BQB=0.997158;DP=2842;DP4=1340,1410,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.94389e-12;MQSB=0.996305;RPB=0.934806;SGB=74.3269;VDB=0.515703;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.5:6176488 chr05:006176488 0 W/6176488-6176488 FN4030-S SNP A -> T AC=1;AN=168;BQB=0.927617;DP=2861;DP4=1337,1436,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.73083e-12;MQSB=0.996662;RPB=0.990915;SGB=58.7637;VDB=0.312058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.5:6179547 chr05:006179547 0 W/6179547-6179547 FN3563-S SNP G -> T AC=2;AN=188;BQB=0.8469;DP=3372;DP4=1964,1277,27,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.34317e-21;MQSB=0.668287;RPB=0.872483;SGB=194.364;VDB=0.202578;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.5:6181493 chr05:006181493 0 W/6181493-6181493 FN3308-S SNP C -> A AC=1;AN=184;BQB=0.986009;DP=4079;DP4=1997,1971,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000245158;MQB=1.19426e-12;MQSB=0.994208;RPB=0.886936;SGB=67.4439;VDB=0.271549;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P531|833|LOC_Os05g11030|protein_coding|CODING|LOC_Os05g11030.1|3|1) FN2666-S.SNP.5:6189526 chr05:006189526 0 W/6189526-6189526 FN2666-S SNP T -> A AC=1;AN=200;BQB=0.889435;DP=4435;DP4=2251,1959,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.30531e-11;MQSB=0.941751;RPB=0.0278432;SGB=58.2954;VDB=0.655694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E56V|1279|LOC_Os05g11040|protein_coding|CODING|LOC_Os05g11040.1|1|1) FN695-S.SNP.5:6193515 chr05:006193515 0 W/6193515-6193515 FN695-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g11060 galactosyltransferase family protein, putative, expressed SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3778-S.SNP.5:6198920 chr05:006198920 0 W/6198920-6198920 FN3778-S SNP C -> G AC=1;AN=190;BQB=0.552194;DP=4569;DP4=2066,2302,19,17;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=0.996403;MQSB=0.817303;RPB=0.998818;SGB=158.388;VDB=0.143833;EFF=INTRON(MODIFIER||||67|LOC_Os05g11064|protein_coding|CODING|LOC_Os05g11064.1|1|1) FN492-S.SNP.5:6199093 chr05:006199093 0 W/6199093-6199093 FN492-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1537-S.SNP.5:6201314 chr05:006201314 0 W/6201314-6201314 FN1537-S Single Base Substitution A-T INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2115-S.SNP.5:6202478 chr05:006202478 0 W/6202478-6202478 FN2115-S SNP A -> T AC=1;AN=168;BQB=0.882303;DP=2545;DP4=1519,976,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.85211e-12;MQSB=0.997645;RPB=0.82789;SGB=11.3448;VDB=0.929502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.5:6203507 chr05:006203507 0 W/6203507-6203507 FN3674-S SNP A -> T AC=2;AN=190;BQB=0.556339;DP=3168;DP4=1678,1334,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.38258e-15;MQSB=0.874744;RPB=0.99346;SGB=75.1932;VDB=0.137467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.5:6204750 chr05:006204750 0 W/6204750-6204750 FN2374 SNP C -> T AC=1;AN=192;BQB=0.79763;DP=4843;DP4=2213,2209,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.4228e-06;MQSB=0.00104078;RPB=0.830727;SGB=1.09742;VDB=0.564442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.5:6213763 chr05:006213763 0 W/6213763-6213763 FN2495 SNP C -> T AC=2;AN=200;BQB=0.827731;DP=4828;DP4=2034,2279,19,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.03436e-15;MQSB=0.966585;RPB=0.158457;SGB=28.752;VDB=0.488267;EFF=INTERGENIC(MODIFIER||||||||||1) FN932-S.SNP.5:6214190 chr05:006214190 0 W/6214190-6214190 FN932-S Single Base Substitution G-T INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN1547-S.SNP.5:6214605 chr05:006214605 0 W/6214605-6214605 FN1547-S Single Base Substitution T-C INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN-107.SNP.5:6217439 chr05:006217439 0 W/6217439-6217439 FN-107 Single Base Substitution C-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3666-S.SNP.5:6230853 chr05:006230853 0 W/6230853-6230853 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.99818;DP=2719;DP4=1304,1240,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.24799e-10;MQSB=0.299201;RPB=0.632124;SGB=33.8752;VDB=0.161823;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.5:6243350 chr05:006243350 0 W/6243350-6243350 FN907-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g11110 retrotransposon protein, putative, unclassified, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3557-S.SNP.5:6247291 chr05:006247291 0 W/6247291-6247291 FN3557-S SNP G -> A AC=2;AN=188;BQB=0.430576;DP=2935;DP4=1240,1592,19,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.5626e-25;MQSB=0.657037;RPB=0.290855;SGB=45.6639;VDB=0.841579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.5:6248022 chr05:006248022 0 W/6248022-6248022 FN3998-S SNP C -> T AC=1;AN=168;BQB=0.809023;DP=2798;DP4=1030,1641,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.95148e-09;MQSB=0.593801;RPB=0.850829;SGB=41.6096;VDB=0.961424;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.5:6248957 chr05:006248957 0 W/6248957-6248957 FN3902-S SNP G -> A AC=2;AN=158;BQB=0.998622;DP=2638;DP4=1422,1119,16,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.07739e-14;MQSB=0.778104;RPB=0.27578;SGB=116.978;VDB=0.318319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.5:6251813 chr05:006251813 0 W/6251813-6251813 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.427376;DP=4216;DP4=2203,1966,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.45535e-08;MQSB=0.996669;RPB=0.999978;SGB=9.91396;VDB=0.0940756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.5:6253503 chr05:006253503 0 W/6253503-6253503 FN2315 SNP A -> T AC=2;AN=192;BQB=0.932034;DP=5098;DP4=2474,1946,27,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.21479e-26;MQSB=0.588405;RPB=0.967558;SGB=-113.313;VDB=0.379349;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.5:6256628 chr05:006256628 0 W/6256628-6256628 FN1220-S Single Base Substitution T-C INTRON HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN2791-S.SNP.5:6275049 chr05:006275049 0 W/6275049-6275049 FN2791-S SNP T -> G AC=1;AN=198;BQB=0.963177;DP=4376;DP4=1932,2205,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.99061e-14;MQSB=0.317286;RPB=0.949462;SGB=63.0809;VDB=0.352901;EFF=INTRON(MODIFIER||||635|LOC_Os05g11140|protein_coding|CODING|LOC_Os05g11140.1|13|1),INTRON(MODIFIER||||607|LOC_Os05g11140|protein_coding|CODING|LOC_Os05g11140.2|13|1),INTRON(MODIFIER||||607|LOC_Os05g11140|protein_coding|CODING|LOC_Os05g11140.3|13|1) FN2266-S.SNP.5:6282810 chr05:006282810 0 W/6282810-6282810 FN2266-S SNP A -> T AC=2;AN=190;BQB=0.920575;DP=4546;DP4=2263,1966,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.85386e-15;MQSB=0.00965524;RPB=0.999358;SGB=103.624;VDB=0.864573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.5:6289305 chr05:006289305 0 W/6289305-6289305 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.994718;DP=2927;DP4=1227,1563,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.83035e-07;MQSB=0.615822;RPB=0.7703;SGB=28.7043;VDB=0.122277;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.5:6291176 chr05:006291176 0 W/6291176-6291176 FN_N1-220-1 Single Base Substitution T-A Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3859-S.SNP.5:6295826 chr05:006295826 0 W/6295826-6295826 FN3859-S SNP C -> G AC=1;AN=158;BQB=0.919515;DP=1799;DP4=267,1322,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.30033e-06;MQSB=0.207549;RPB=0.777677;SGB=34.0735;VDB=0.642829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.5:6300723 chr05:006300723 0 W/6300723-6300723 FN2272-S SNP T -> A AC=1;AN=190;BQB=0.813102;DP=4518;DP4=2124,1958,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.78548e-15;MQSB=0.907669;RPB=0.632513;SGB=59.414;VDB=0.623648;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.5:6310918 chr05:006310918 0 W/6310918-6310918 FN4088-S SNP G -> C AC=2;AN=182;BQB=0.999578;DP=3228;DP4=1482,1657,13,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.20863e-16;MQSB=0.141726;RPB=0.99601;SGB=60.807;VDB=0.107724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.5:6318250 chr05:006318250 0 W/6318250-6318250 FN2417 SNP A -> T AC=1;AN=200;BQB=0.259048;DP=4846;DP4=2206,2364,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76127e-07;MQSB=0.773983;RPB=0.999794;SGB=45.0543;VDB=0.732461;EFF=INTRON(MODIFIER||||162|LOC_Os05g11190|protein_coding|CODING|LOC_Os05g11190.1|1|1) FN3515-S.SNP.5:6320430 chr05:006320430 0 W/6320430-6320430 FN3515-S SNP G -> T AC=1;AN=188;BQB=0.94271;DP=3066;DP4=1545,1396,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.52374e-10;MQSB=0.99127;RPB=0.543336;SGB=57.244;VDB=0.649167;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.5:6324023 chr05:006324023 0 W/6324023-6324023 FN484-S Single Base Substitution T-C INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3626-S.SNP.5:6328538 chr05:006328538 0 W/6328538-6328538 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.627117;DP=2707;DP4=1207,1398,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.82501e-06;MQSB=0.948202;RPB=0.891335;SGB=2.55724;VDB=0.0821687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.5:6333765 chr05:006333765 0 W/6333765-6333765 FN2495 SNP G -> A AC=1;AN=200;BQB=0.088555;DP=4207;DP4=1975,2032,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.35233e-08;MQSB=0.955683;RPB=0.986953;SGB=-14.9257;VDB=0.865087;EFF=UTR_3_PRIME(MODIFIER||47||203|LOC_Os05g11210|protein_coding|CODING|LOC_Os05g11210.1|1|1) FN786-S.SNP.5:6336268 chr05:006336268 0 W/6336268-6336268 FN786-S Single Base Substitution G-T INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN542-S.SNP.5:6337852 chr05:006337852 0 W/6337852-6337852 FN542-S Single Base Substitution T-A INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2612-S.SNP.5:6338341 chr05:006338341 0 W/6338341-6338341 FN2612-S SNP C -> T AC=1;AN=186;BQB=0.392167;DP=3634;DP4=1903,1538,13,16;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.50688e-15;MQSB=0.931189;RPB=0.991881;SGB=60.4858;VDB=0.847598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.5:6341043 chr05:006341043 0 W/6341043-6341043 FN2091-S SNP C -> T AC=2;AN=168;BQB=0.356443;DP=1764;DP4=1074,642,16,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.89493e-08;MQSB=0.351627;RPB=0.929464;SGB=-41.7816;VDB=0.646365;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.5:6342472 chr05:006342472 0 W/6342472-6342472 FN1027-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1288-S.SNP.5:6342881 chr05:006342881 0 W/6342881-6342881 FN1288-S Single Base Substitution G-A INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3574-S.SNP.5:6346564 chr05:006346564 0 W/6346564-6346564 FN3574-S SNP C -> A AC=1;AN=188;BQB=0.983962;DP=3378;DP4=1872,1415,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.66625e-13;MQSB=0.991815;RPB=0.997754;SGB=85.3253;VDB=0.377852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1131-S.SNP.5:6355620 chr05:006355620 0 W/6355620-6355620 FN1131-S Single Base Substitution T-C INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN-207.SNP.5:6356162 chr05:006356162 0 W/6356162-6356162 FN-207 Single Base Substitution T-A INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2082-S.SNP.5:6362415 chr05:006362415 0 W/6362415-6362415 FN2082-S SNP G -> T AC=1;AN=168;BQB=0.0373018;DP=5625;DP4=2646,2898,24,33;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.166933;MQB=0.9381;MQSB=0;RPB=0.99103;SGB=-367.12;VDB=0.979983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.5:6372329 chr05:006372329 0 W/6372329-6372329 FN3295-S SNP G -> A AC=1;AN=184;BQB=0.861902;DP=3141;DP4=1700,1320,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16913e-07;MQSB=0.289328;RPB=0.880558;SGB=48.7425;VDB=0.983426;EFF=INTRON(MODIFIER||||178|LOC_Os05g11290|protein_coding|CODING|LOC_Os05g11290.1|2|1) FN908-S.SNP.5:6372663 chr05:006372663 0 W/6372663-6372663 FN908-S Single Base Substitution T-C INTRON HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2234-S.SNP.5:6380585 chr05:006380585 0 W/6380585-6380585 FN2234-S SNP A -> G AC=1;AN=190;BQB=0.999539;DP=3173;DP4=849,1467,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00561619;MQSB=3.95844e-05;RPB=0.331427;SGB=-35.4322;VDB=0.202281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S68G|199|LOC_Os05g11300|protein_coding|CODING|LOC_Os05g11300.1|2|1) FN3537-S.SNP.5:6380585 chr05:006380585 0 W/6380585-6380585 FN3537-S SNP A -> G AC=2;AN=188;BQB=0.999639;DP=2582;DP4=1141,1065,15,18;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.63841e-08;MQSB=0.00586486;RPB=0.913718;SGB=-80.8397;VDB=0.0760082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S68G|199|LOC_Os05g11300|protein_coding|CODING|LOC_Os05g11300.1|2|1) FN2299.SNP.5:6382909 chr05:006382909 0 W/6382909-6382909 FN2299 SNP G -> A AC=1;AN=192;BQB=0.950087;DP=4548;DP4=2109,1898,5,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.87325e-09;MQSB=0.697563;RPB=0.652709;SGB=57.6018;VDB=0.557152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.5:6386982 chr05:006386982 0 W/6386982-6386982 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.813197;DP=3555;DP4=2033,1271,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000281294;MQB=0.00067638;MQSB=0.993027;RPB=0.999451;SGB=28.9929;VDB=0.181116;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.5:6387073 chr05:006387073 0 W/6387073-6387073 FN849-S Single Base Substitution C-T INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2461.SNP.5:6390429 chr05:006390429 0 W/6390429-6390429 FN2461 SNP C -> T AC=1;AN=200;BQB=0.459737;DP=5158;DP4=2201,2446,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47469e-10;MQSB=0.705828;RPB=0.99923;SGB=-85.7004;VDB=0.639751;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.5:6398327 chr05:006398327 0 W/6398327-6398327 FN480-S Single Base Substitution C-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1547-S.SNP.5:6400652 chr05:006400652 0 W/6400652-6400652 FN1547-S Single Base Substitution T-A INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN1423-S.SNP.5:6405161 chr05:006405161 0 W/6405161-6405161 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2429.SNP.5:6405419 chr05:006405419 0 W/6405419-6405419 FN2429 SNP G -> A AC=2;AN=200;BQB=0.580881;DP=4476;DP4=2112,2034,23,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.85502e-30;MQSB=0.770043;RPB=0.554891;SGB=72.0916;VDB=0.92981;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.5:6414104 chr05:006414104 0 W/6414104-6414104 FN2358 SNP G -> A AC=1;AN=192;BQB=0.797694;DP=4394;DP4=1828,2023,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.56481e-09;MQSB=0.971606;RPB=0.630322;SGB=-14.2043;VDB=0.321158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.5:6416824 chr05:006416824 0 W/6416824-6416824 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.992497;DP=2248;DP4=959,1187,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90799e-08;MQSB=0.394474;RPB=0.705851;SGB=76.4186;VDB=0.658373;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V102|200|LOC_Os05g11360|protein_coding|CODING|LOC_Os05g11360.1|1|1) FN1135-S.SNP.5:6417555 chr05:006417555 0 W/6417555-6417555 FN1135-S Single Base Substitution C-T INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1751-S.SNP.5:6421868 chr05:006421868 0 W/6421868-6421868 FN1751-S SNP T -> G AC=2;AN=188;BQB=0.977166;DP=3629;DP4=1786,1779,27,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.18897e-23;MQSB=0.441812;RPB=0.707867;SGB=54.9236;VDB=0.598737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L118W|352|LOC_Os05g11370|protein_coding|CODING|LOC_Os05g11370.1|2|1) FN2174-S.SNP.5:6423631 chr05:006423631 0 W/6423631-6423631 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.0675931;DP=3267;DP4=1757,1469,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30641e-06;MQSB=0.956249;RPB=0.802667;SGB=-15.8033;VDB=0.442175;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.5:6424606 chr05:006424606 0 W/6424606-6424606 W443-5-1-3 Single Base Substitution C-A INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. W443-5-1-3.SNP.5:6424607 chr05:006424607 0 W/6424607-6424607 W443-5-1-3 Single Base Substitution C-A INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3893-S.SNP.5:6425874 chr05:006425874 0 W/6425874-6425874 FN3893-S SNP A -> G AC=2;AN=158;BQB=0.933075;DP=2327;DP4=1126,1094,21,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.48743e-21;MQSB=0.94856;RPB=0.877209;SGB=121.679;VDB=0.499036;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.5:6432165 chr05:006432165 0 W/6432165-6432165 W463-2-1 Single Base Substitution T-C INTRON HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1009-S.SNP.5:6438104 chr05:006438104 0 W/6438104-6438104 FN1009-S Single Base Substitution T-A INTRON HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3857-S.SNP.5:6443533 chr05:006443533 0 W/6443533-6443533 FN3857-S SNP A -> G AC=1;AN=158;BQB=0.979057;DP=2465;DP4=1167,1166,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.58684e-08;MQSB=0.729378;RPB=0.620155;SGB=60.1755;VDB=0.442081;EFF=INTRON(MODIFIER||||442|LOC_Os05g11400|protein_coding|CODING|LOC_Os05g11400.1|3|1) FN_543-2-6.SNP.5:6444935 chr05:006444935 0 W/6444935-6444935 FN_543-2-6 Single Base Substitution G-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN4260-S.SNP.5:6445651 chr05:006445651 0 W/6445651-6445651 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.496417;DP=2473;DP4=1342,915,13,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=2.35182e-06;MQSB=0.0296825;RPB=0.490968;SGB=55.5339;VDB=0.148798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.5:6447271 chr05:006447271 0 W/6447271-6447271 FN2557-S SNP C -> T AC=2;AN=198;BQB=0.88529;DP=4083;DP4=1827,2005,11,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.4077e-18;MQSB=0.997945;RPB=0.758419;SGB=63.0809;VDB=0.0207008;EFF=UTR_3_PRIME(MODIFIER||218||288|LOC_Os05g11414|protein_coding|CODING|LOC_Os05g11414.1|8|1) FN618-S.SNP.5:6447546 chr05:006447546 0 W/6447546-6447546 FN618-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1549-S.SNP.5:6450756 chr05:006450756 0 W/6450756-6450756 FN1549-S Single Base Substitution C-T INTRON Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1508-S.SNP.5:6450931 chr05:006450931 0 W/6450931-6450931 FN1508-S Single Base Substitution C-T INTRON Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3893-S.SNP.5:6465925 chr05:006465925 0 W/6465925-6465925 FN3893-S SNP C -> T AC=2;AN=158;BQB=0.835105;DP=2503;DP4=1055,1315,10,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.03058e-23;MQSB=0.266694;RPB=0.69499;SGB=169.412;VDB=0.578832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.5:6473623 chr05:006473623 0 W/6473623-6473623 FN2392 SNP G -> C AC=2;AN=200;BQB=3.89368e-15;DP=5044;DP4=2579,2193,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34609e-14;MQSB=0.966286;RPB=0.905498;SGB=-5.24302;VDB=0.0115274;EFF=INTRON(MODIFIER||||755|LOC_Os05g11428|protein_coding|CODING|LOC_Os05g11428.1|2|1) FN888-S.SNP.5:6475272 chr05:006475272 0 W/6475272-6475272 FN888-S Single Base Substitution T-C INTRON HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3280-S.SNP.5:6476233 chr05:006476233 0 W/6476233-6476233 FN3280-S SNP G -> A AC=2;AN=184;BQB=0.983943;DP=3266;DP4=1130,1970,8,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.04791e-12;MQSB=0.914405;RPB=0.312463;SGB=121.091;VDB=0.0096634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A11V|755|LOC_Os05g11428|protein_coding|CODING|LOC_Os05g11428.1|2|1) FN2537-S.SNP.5:6478416 chr05:006478416 0 W/6478416-6478416 FN2537-S SNP G -> T AC=1;AN=198;BQB=0.999994;DP=3818;DP4=1781,1737,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20812e-05;MQSB=0.356971;RPB=0.785348;SGB=40.3588;VDB=0.902153;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.5:6480293 chr05:006480293 0 W/6480293-6480293 FN885-S Single Base Substitution C-T INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN4300-S.SNP.5:6486794 chr05:006486794 0 W/6486794-6486794 FN4300-S SNP A -> C AC=1;AN=170;BQB=0.983295;DP=2182;DP4=1042,1062,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.44858e-05;MQSB=0.455221;RPB=0.857255;SGB=17.6652;VDB=0.561637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.5:6500108 chr05:006500108 0 W/6500108-6500108 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.0164314;DP=4087;DP4=2102,1943,18,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87696e-15;MQSB=0.973484;RPB=0.878264;SGB=-126.323;VDB=0.889664;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.5:6504540 chr05:006504540 0 W/6504540-6504540 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.999627;DP=3272;DP4=1464,1720,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.50624e-18;MQSB=0.717834;RPB=0.68224;SGB=144.388;VDB=0.605995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:6505002 chr05:006505002 0 W/6505002-6505002 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.883418;DP=4943;DP4=2545,1974,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39765e-09;MQSB=0.668109;RPB=0.913383;SGB=49.1985;VDB=0.99446;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.5:6505002 chr05:006505002 0 W/6505002-6505002 FN4011-S SNP C -> T AC=2;AN=168;BQB=0.977477;DP=2875;DP4=1526,1178,21,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87149e-19;MQSB=0.977207;RPB=0.829737;SGB=113.657;VDB=0.210702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.5:6505219 chr05:006505219 0 W/6505219-6505219 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.999911;DP=4780;DP4=2483,1983,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.30917e-11;MQSB=0.995777;RPB=0.997548;SGB=14.3054;VDB=0.0798082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.5:6508760 chr05:006508760 0 W/6508760-6508760 FN2440 SNP G -> A AC=1;AN=200;BQB=0.992595;DP=4442;DP4=2235,1921,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.93819e-14;MQSB=0.967581;RPB=0.806938;SGB=69.1109;VDB=0.124884;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.5:6508795 chr05:006508795 0 W/6508795-6508795 FN1718-S SNP C -> T AC=2;AN=188;BQB=0.986049;DP=2914;DP4=1624,1234,19,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.83175e-15;MQSB=0.980456;RPB=0.93556;SGB=121.672;VDB=0.101147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.5:6509435 chr05:006509435 0 W/6509435-6509435 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.617897;DP=4755;DP4=2227,2328,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.446e-08;MQSB=0.999639;RPB=0.837615;SGB=16.4591;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN-153 Single Base Substitution T-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-203.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN-203 Single Base Substitution T-A INTERGENIC HOMO SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-292.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN-292 Single Base Substitution T-A INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-55.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN-55 Single Base Substitution T-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN1239-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN1239-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1463-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN1463-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2280-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN2280-S SNP T -> A AC=1;AN=190;BQB=0.999878;DP=4374;DP4=2023,2034,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000228624;MQB=1.8599e-08;MQSB=0.677773;RPB=0.857822;SGB=23.6597;VDB=0.271244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN2349 SNP T -> A AC=1;AN=192;BQB=0.499757;DP=4612;DP4=2141,2143,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000216826;MQB=6.15762e-10;MQSB=0.58816;RPB=0.667614;SGB=54.0374;VDB=0.105808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN2593-S SNP T -> A AC=2;AN=198;BQB=0.0197432;DP=3703;DP4=1729,1687,32,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000270051;MQB=1.82902e-34;MQSB=0.614406;RPB=0.910753;SGB=188.631;VDB=0.108746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN3298-S SNP T -> A AC=2;AN=184;BQB=0.872661;DP=2680;DP4=1326,1244,10,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000373134;MQB=1.91407e-08;MQSB=0.97785;RPB=0.61058;SGB=66.8296;VDB=0.150845;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN355-S Single Base Substitution T-A INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN4036-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN4036-S SNP T -> A AC=1;AN=168;BQB=0.836621;DP=2494;DP4=1166,1205,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000801925;MQB=3.5228e-05;MQSB=0.936819;RPB=0.37351;SGB=19.7539;VDB=0.419688;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN479-S Single Base Substitution T-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN792-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN792-S Single Base Substitution T-A INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN855-S.SNP.5:6519464 chr05:006519464 0 W/6519464-6519464 FN855-S Single Base Substitution T-A INTERGENIC HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN2326.SNP.5:6524960 chr05:006524960 0 W/6524960-6524960 FN2326 SNP G -> T AC=1;AN=192;BQB=0.979448;DP=5306;DP4=2445,2554,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.50112e-10;MQSB=0.718597;RPB=0.9423;SGB=10.4835;VDB=0.398905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.5:6527946 chr05:006527946 0 W/6527946-6527946 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.54411;DP=4249;DP4=1834,2156,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.5474e-08;MQSB=0.999698;RPB=0.272088;SGB=63.3342;VDB=0.17151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.5:6528987 chr05:006528987 0 W/6528987-6528987 FN2362 SNP G -> A AC=1;AN=192;BQB=0.862765;DP=3843;DP4=1621,1668,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000260213;MQB=1.3639e-05;MQSB=4.97852e-07;RPB=0.132378;SGB=10.4835;VDB=0.397045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.5:6534160 chr05:006534160 0 W/6534160-6534160 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.975063;DP=2611;DP4=1328,1231,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.44773e-09;MQSB=0.970528;RPB=0.63094;SGB=58.0655;VDB=0.110322;EFF=INTRON(MODIFIER||||483|LOC_Os05g11550|protein_coding|CODING|LOC_Os05g11550.1|5|1),INTRON(MODIFIER||||451|LOC_Os05g11550|protein_coding|CODING|LOC_Os05g11550.2|5|1) FN1727-S.SNP.5:6540528 chr05:006540528 0 W/6540528-6540528 FN1727-S SNP A -> T AC=2;AN=188;BQB=0.905272;DP=3710;DP4=1898,1742,25,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.15863e-26;MQSB=0.931997;RPB=0.896528;SGB=58.0102;VDB=0.353318;EFF=INTRON(MODIFIER||||286|LOC_Os05g11560|protein_coding|CODING|LOC_Os05g11560.1|3|1) FN1614-S.SNP.5:6541612 chr05:006541612 0 W/6541612-6541612 FN1614-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3670-S.SNP.5:6554915 chr05:006554915 0 W/6554915-6554915 FN3670-S SNP T -> C AC=2;AN=190;BQB=0.567257;DP=2516;DP4=1213,1194,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.6429e-09;MQSB=0.988993;RPB=0.993568;SGB=10.3266;VDB=0.366435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.5:6555568 chr05:006555568 0 W/6555568-6555568 FN1060-S Single Base Substitution A-G INTERGENIC HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3449-S.SNP.5:6565867 chr05:006565867 0 W/6565867-6565867 FN3449-S SNP C -> T AC=1;AN=184;BQB=0.875249;DP=2511;DP4=1273,1149,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.35845e-10;MQSB=0.999783;RPB=0.253506;SGB=62.3078;VDB=0.630955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.5:6568742 chr05:006568742 0 W/6568742-6568742 FN3499-S SNP G -> C AC=1;AN=188;BQB=0.916207;DP=2675;DP4=1401,1219,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.46584e-05;MQSB=0.975899;RPB=0.954155;SGB=18.2682;VDB=0.936663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.5:6573588 chr05:006573588 0 W/6573588-6573588 FN3558-S SNP A -> G AC=2;AN=188;BQB=0.955862;DP=2627;DP4=1092,1436,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.01693e-14;MQSB=0.480772;RPB=0.996996;SGB=108.042;VDB=0.804187;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.5:6576767 chr05:006576767 0 W/6576767-6576767 FN431-S Single Base Substitution T-C INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN2670-S.SNP.5:6581825 chr05:006581825 0 W/6581825-6581825 FN2670-S SNP T -> C AC=1;AN=200;BQB=0.79425;DP=4832;DP4=2084,2470,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84305e-20;MQSB=0.999898;RPB=0.966624;SGB=35.1726;VDB=0.450708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.5:6586122 chr05:006586122 0 W/6586122-6586122 FN1034-S Single Base Substitution T-C INTERGENIC HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN2531-S.SNP.5:6586610 chr05:006586610 0 W/6586610-6586610 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.733236;DP=4268;DP4=1954,2121,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.52131e-06;MQSB=0.345979;RPB=0.492249;SGB=13.7737;VDB=0.888312;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.5:6591174 chr05:006591174 0 W/6591174-6591174 FN916-S Single Base Substitution A-T INTRON HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN917-S.SNP.5:6598011 chr05:006598011 0 W/6598011-6598011 FN917-S Single Base Substitution A-G INTERGENIC HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN2290.SNP.5:6603289 chr05:006603289 0 W/6603289-6603289 FN2290 SNP C -> T AC=1;AN=192;BQB=0.415944;DP=4429;DP4=1965,2063,13,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.21531e-17;MQSB=0.530223;RPB=0.966787;SGB=40.2061;VDB=0.29341;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.5:6605831 chr05:006605831 0 W/6605831-6605831 W502-3-4 Single Base Substitution G-A INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1022-S.SNP.5:6609905 chr05:006609905 0 W/6609905-6609905 FN1022-S Single Base Substitution A-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN4160-S.SNP.5:6613586 chr05:006613586 0 W/6613586-6613586 FN4160-S SNP G -> C AC=2;AN=170;BQB=0.662065;DP=2046;DP4=943,995,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.34787e-12;MQSB=0.77146;RPB=0.99997;SGB=87.856;VDB=0.907046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.5:6613827 chr05:006613827 0 W/6613827-6613827 FN2399 SNP G -> T AC=1;AN=200;BQB=0.684393;DP=4144;DP4=1970,1987,9,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.33355e-08;MQSB=3.61809e-08;RPB=0.521688;SGB=51.0851;VDB=0.392866;EFF=INTERGENIC(MODIFIER||||||||||1) 701-3.SNP.5:6614084 chr05:006614084 0 W/6614084-6614084 701-3 Single Base Substitution A-G INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN2765-S.SNP.5:6617047 chr05:006617047 0 W/6617047-6617047 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.702617;DP=4415;DP4=2047,2057,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.80885e-10;MQSB=0.996536;RPB=0.942782;SGB=72.5245;VDB=0.596295;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.5:6619094 chr05:006619094 0 W/6619094-6619094 FN4177-S SNP G -> T AC=1;AN=170;BQB=0.964158;DP=2625;DP4=1257,1301,10,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.41608e-13;MQSB=0.998752;RPB=0.796641;SGB=-13.4484;VDB=0.850791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.5:6621623 chr05:006621623 0 W/6621623-6621623 FN3831-S SNP G -> A AC=2;AN=190;BQB=0.874615;DP=2831;DP4=1373,1352,7,14;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0162487;MQB=3.31623e-05;MQSB=0.0605569;RPB=0.815154;SGB=90.0802;VDB=0.978551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R226Q|626|LOC_Os05g11670|protein_coding|CODING|LOC_Os05g11670.1|2|1) FN2768-S.SNP.5:6631639 chr05:006631639 0 W/6631639-6631639 FN2768-S SNP A -> T AC=2;AN=198;BQB=0.816919;DP=3721;DP4=1728,1726,14,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.96842e-14;MQSB=0.110863;RPB=0.855534;SGB=94.0758;VDB=0.335679;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.5:6635407 chr05:006635407 0 W/6635407-6635407 FN-299 Single Base Substitution G-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-299.SNP.5:6635408 chr05:006635408 0 W/6635408-6635408 FN-299 Single Base Substitution T-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1288-S.SNP.5:6639021 chr05:006639021 0 W/6639021-6639021 FN1288-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3698-S.SNP.5:6639021 chr05:006639021 0 W/6639021-6639021 FN3698-S SNP C -> A AC=2;AN=190;BQB=0.462207;DP=2995;DP4=1485,1385,15,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.75453e-12;MQSB=0.915855;RPB=0.930771;SGB=89.4087;VDB=0.613915;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.5:6645786 chr05:006645786 0 W/6645786-6645786 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2433.SNP.5:6651380 chr05:006651380 0 W/6651380-6651380 FN2433 SNP G -> T AC=1;AN=200;BQB=0.954847;DP=4447;DP4=2234,1981,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02391e-10;MQSB=0.986436;RPB=0.264737;SGB=47.4799;VDB=0.888061;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G137*|182|LOC_Os05g11710|protein_coding|CODING|LOC_Os05g11710.1|5|1) FN3911-S.SNP.5:6654660 chr05:006654660 0 W/6654660-6654660 FN3911-S SNP C -> G AC=2;AN=158;BQB=0.970104;DP=2293;DP4=1198,1011,4,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.61215e-07;MQSB=0.998697;RPB=0.855909;SGB=42.6978;VDB=0.389077;EFF=INTRON(MODIFIER||||168|LOC_Os05g11720|protein_coding|CODING|LOC_Os05g11720.1|1|1) FN2541-S.SNP.5:6655153 chr05:006655153 0 W/6655153-6655153 FN2541-S SNP T -> G AC=1;AN=198;BQB=0.988344;DP=4356;DP4=2113,2015,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.95005e-16;MQSB=0.998644;RPB=0.560659;SGB=113.881;VDB=0.867626;EFF=INTRON(MODIFIER||||168|LOC_Os05g11720|protein_coding|CODING|LOC_Os05g11720.1|1|1) FN3661-S.SNP.5:6655720 chr05:006655720 0 W/6655720-6655720 FN3661-S SNP T -> C AC=2;AN=190;BQB=0.82263;DP=3142;DP4=1471,1497,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.83367e-17;MQSB=0.486829;RPB=0.573718;SGB=67.0756;VDB=0.624743;EFF=INTRON(MODIFIER||||168|LOC_Os05g11720|protein_coding|CODING|LOC_Os05g11720.1|1|1) W22-2-1.SNP.5:6663065 chr05:006663065 0 W/6663065-6663065 W22-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2630-S.SNP.5:6666754 chr05:006666754 0 W/6666754-6666754 FN2630-S SNP T -> C AC=2;AN=200;BQB=0.928764;DP=4876;DP4=2247,2373,22,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.84929e-27;MQSB=0.987433;RPB=0.777009;SGB=59.2502;VDB=0.555197;EFF=INTRON(MODIFIER||||424|LOC_Os05g11750|protein_coding|CODING|LOC_Os05g11750.1|5|1) FN2419.SNP.5:6673605 chr05:006673605 0 W/6673605-6673605 FN2419 SNP T -> G AC=2;AN=200;BQB=0.119158;DP=4399;DP4=1992,2009,40,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.0006e-26;MQSB=0.481551;RPB=0.562488;SGB=183.065;VDB=0.968245;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.5:6684122 chr05:006684122 0 W/6684122-6684122 FN319-S Single Base Substitution G-A INTRON HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN1436-S.SNP.5:6689003 chr05:006689003 0 W/6689003-6689003 FN1436-S Single Base Substitution C-T INTRON HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN791-S.SNP.5:6694398 chr05:006694398 0 W/6694398-6694398 FN791-S Single Base Substitution T-C INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2434.SNP.5:6699276 chr05:006699276 0 W/6699276-6699276 FN2434 SNP A -> G AC=1;AN=200;BQB=0.999518;DP=4910;DP4=2535,2126,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.90641e-07;MQSB=0.99551;RPB=0.724467;SGB=-0.141083;VDB=0.462963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T122A|306|LOC_Os05g11780|protein_coding|CODING|LOC_Os05g11780.1|4|1) FN-99.SNP.5:6702821 chr05:006702821 0 W/6702821-6702821 FN-99 Single Base Substitution C-A UTR_5_PRIME HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-313.SNP.5:6707014 chr05:006707014 0 W/6707014-6707014 FN-313 Single Base Substitution C-T INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1624-S.SNP.5:6709328 chr05:006709328 0 W/6709328-6709328 FN1624-S Single Base Substitution C-T INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN804-S.SNP.5:6713288 chr05:006713288 0 W/6713288-6713288 FN804-S Single Base Substitution T-C INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2583-S.SNP.5:6714836 chr05:006714836 0 W/6714836-6714836 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.639924;DP=5012;DP4=2201,2571,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.52491e-06;MQSB=0.973207;RPB=0.769586;SGB=54.2646;VDB=0.586927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.5:6716457 chr05:006716457 0 W/6716457-6716457 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.390997;DP=2917;DP4=1309,1463,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0476517;MQB=0.329558;MQSB=0;RPB=0.19359;SGB=23.6597;VDB=0.986833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.5:6720174 chr05:006720174 0 W/6720174-6720174 FN1315-S Single Base Substitution T-C INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN3728-S.SNP.5:6720493 chr05:006720493 0 W/6720493-6720493 FN3728-S SNP A -> T AC=1;AN=190;BQB=0.737352;DP=2699;DP4=1232,1329,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51953e-08;MQSB=0.576942;RPB=0.99591;SGB=36.1006;VDB=0.387623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.5:6736152 chr05:006736152 0 W/6736152-6736152 FN2753-S SNP T -> A AC=2;AN=200;BQB=0.568096;DP=4509;DP4=2039,2230,22,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.2406e-23;MQSB=0.992286;RPB=0.828163;SGB=94.6142;VDB=0.215294;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.5:6746149 chr05:006746149 0 W/6746149-6746149 FN521-S Single Base Substitution G-C INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN872-S.SNP.5:6748531 chr05:006748531 0 W/6748531-6748531 FN872-S Single Base Substitution T-A INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1173-S.SNP.5:6750096 chr05:006750096 0 W/6750096-6750096 FN1173-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2328.SNP.5:6750721 chr05:006750721 0 W/6750721-6750721 FN2328 SNP C -> T AC=1;AN=192;BQB=0.877551;DP=4284;DP4=1983,2057,11,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.10842e-15;MQSB=0.983124;RPB=0.39524;SGB=100.374;VDB=0.530411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.5:6757301 chr05:006757301 0 W/6757301-6757301 FN2625-S SNP G -> T AC=1;AN=200;BQB=0.783912;DP=4852;DP4=2267,2351,6,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96147e-15;MQSB=0.759067;RPB=0.509758;SGB=76.3213;VDB=0.154171;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.5:6762351 chr05:006762351 0 W/6762351-6762351 FN409-S Single Base Substitution T-G INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN-152.SNP.5:6769466 chr05:006769466 0 W/6769466-6769466 FN-152 Single Base Substitution T-G INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1630-S.SNP.5:6770482 chr05:006770482 0 W/6770482-6770482 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3883-S.SNP.5:6773315 chr05:006773315 0 W/6773315-6773315 FN3883-S SNP C -> G AC=1;AN=158;BQB=0.840754;DP=1799;DP4=843,877,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.91623e-08;MQSB=0.866887;RPB=0.993836;SGB=55.806;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.5:6779155 chr05:006779155 0 W/6779155-6779155 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.906393;DP=3920;DP4=1938,1931,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9902e-12;MQSB=0.992006;RPB=0.975817;SGB=31.908;VDB=0.358604;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.5:6784299 chr05:006784299 0 W/6784299-6784299 FN786-S Single Base Substitution T-C INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN899-S.SNP.5:6784789 chr05:006784789 0 W/6784789-6784789 FN899-S Single Base Substitution A-C INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2588-S.SNP.5:6786011 chr05:006786011 0 W/6786011-6786011 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.170945;DP=3885;DP4=1940,1680,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.0018018;MQB=5.92191e-13;MQSB=0.95606;RPB=0.393838;SGB=42.3199;VDB=0.0287256;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.5:6796784 chr05:006796784 0 W/6796784-6796784 FN-108 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN753-S.SNP.5:6799278 chr05:006799278 0 W/6799278-6799278 FN753-S Single Base Substitution T-C INTERGENIC HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN739-S.SNP.5:6799587 chr05:006799587 0 W/6799587-6799587 FN739-S Single Base Substitution A-G INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3780-S.SNP.5:6805368 chr05:006805368 0 W/6805368-6805368 FN3780-S SNP C -> G AC=1;AN=190;BQB=0.994325;DP=3260;DP4=1474,1688,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.24637e-07;MQSB=0.99201;RPB=0.958344;SGB=25.439;VDB=0.713138;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.5:6810327 chr05:006810327 0 W/6810327-6810327 FN752-S Single Base Substitution T-C INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN752-S.SNP.5:6810330 chr05:006810330 0 W/6810330-6810330 FN752-S Single Base Substitution T-A INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1374-S.SNP.5:6815638 chr05:006815638 0 W/6815638-6815638 FN1374-S Single Base Substitution C-T INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3424-S.SNP.5:6816342 chr05:006816342 0 W/6816342-6816342 FN3424-S SNP C -> A AC=1;AN=184;BQB=0.808893;DP=2768;DP4=1091,1471,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37923e-08;MQSB=0.994849;RPB=0.114253;SGB=-36.2304;VDB=0.243468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.5:6816534 chr05:006816534 0 W/6816534-6816534 FN3394-S SNP T -> C AC=1;AN=184;BQB=0.882181;DP=3020;DP4=1432,1469,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000331126;MQB=1.14788e-09;MQSB=0.893826;RPB=0.42238;SGB=42.7914;VDB=0.71998;EFF=INTERGENIC(MODIFIER||||||||||1) FN-4.SNP.5:6820653 chr05:006820653 0 W/6820653-6820653 FN-4 Single Base Substitution A-T INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN2678-S.SNP.5:6823938 chr05:006823938 0 W/6823938-6823938 FN2678-S SNP A -> T AC=1;AN=200;BQB=0.850964;DP=4448;DP4=1969,2236,3,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02303e-11;MQSB=0.662019;RPB=0.95315;SGB=32.0901;VDB=0.563978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.5:6830075 chr05:006830075 0 W/6830075-6830075 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.847511;DP=4477;DP4=2125,2143,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223364;MQB=1.0058e-17;MQSB=0.997448;RPB=0.998229;SGB=90.7419;VDB=0.653642;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.5:6833696 chr05:006833696 0 W/6833696-6833696 FN912-S Single Base Substitution G-T INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN912-S.SNP.5:6833697 chr05:006833697 0 W/6833697-6833697 FN912-S Single Base Substitution T-G INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN745-S.SNP.5:6855992 chr05:006855992 0 W/6855992-6855992 FN745-S Single Base Substitution T-C INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN457-S.SNP.5:6865757 chr05:006865757 0 W/6865757-6865757 FN457-S Single Base Substitution C-A INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3924-S.SNP.5:6869647 chr05:006869647 0 W/6869647-6869647 FN3924-S SNP C -> T AC=2;AN=158;BQB=0.98388;DP=2454;DP4=1226,1034,18,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000407498;MQB=9.57183e-17;MQSB=0.992518;RPB=0.64768;SGB=59.3604;VDB=0.944157;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.5:6870559 chr05:006870559 0 W/6870559-6870559 FN774-S Single Base Substitution G-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1317-S.SNP.5:6870868 chr05:006870868 0 W/6870868-6870868 FN1317-S Single Base Substitution A-T INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1317-S.SNP.5:6870873 chr05:006870873 0 W/6870873-6870873 FN1317-S Single Base Substitution A-T INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN230-S.SNP.5:6875893 chr05:006875893 0 W/6875893-6875893 FN230-S Single Base Substitution T-C INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN1431-S.SNP.5:6880452 chr05:006880452 0 W/6880452-6880452 FN1431-S Single Base Substitution C-T INTRON HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1446-S.SNP.5:6883918 chr05:006883918 0 W/6883918-6883918 FN1446-S Single Base Substitution C-T INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2379.SNP.5:6887687 chr05:006887687 0 W/6887687-6887687 FN2379 SNP G -> A AC=1;AN=192;BQB=0.212379;DP=4598;DP4=2111,2235,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000217486;MQB=2.07009e-13;MQSB=0.991176;RPB=0.649025;SGB=86.1165;VDB=0.952051;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.5:6890283 chr05:006890283 0 W/6890283-6890283 FN-128 Single Base Substitution G-T INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. W313-1-1-1-1.SNP.5:6893618 chr05:006893618 0 W/6893618-6893618 W313-1-1-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-259.SNP.5:6894220 chr05:006894220 0 W/6894220-6894220 FN-259 Single Base Substitution T-C INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN977-S.SNP.5:6895677 chr05:006895677 0 W/6895677-6895677 FN977-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g12060 retrotransposon protein, putative, unclassified, expressed SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN568-S.SNP.5:6896719 chr05:006896719 0 W/6896719-6896719 FN568-S Single Base Substitution G-A INTRON HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2373.SNP.5:6897718 chr05:006897718 0 W/6897718-6897718 FN2373 SNP A -> C AC=1;AN=192;BQB=0.615424;DP=3851;DP4=1701,1956,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.21941e-07;MQSB=0.520162;RPB=0.856583;SGB=23.7852;VDB=0.715136;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W677G|1293|LOC_Os05g12060|protein_coding|CODING|LOC_Os05g12060.1|5|1) FN3824-S.SNP.5:6902824 chr05:006902824 0 W/6902824-6902824 FN3824-S SNP A -> G AC=1;AN=190;BQB=0.933795;DP=3186;DP4=1556,1504,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06724e-05;MQSB=0.988691;RPB=0.60198;SGB=49.0954;VDB=0.228708;EFF=INTERGENIC(MODIFIER||||||||||1) FN-197.SNP.5:6904830 chr05:006904830 0 W/6904830-6904830 FN-197 Single Base Substitution T-C INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2211-S.SNP.5:6905970 chr05:006905970 0 W/6905970-6905970 FN2211-S SNP T -> A AC=1;AN=190;BQB=0.295064;DP=4505;DP4=2258,1820,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.84581e-06;MQSB=0.69624;RPB=0.329576;SGB=26.2136;VDB=0.807779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.5:6910429 chr05:006910429 0 W/6910429-6910429 FN3282-S SNP T -> C AC=1;AN=184;BQB=0.928871;DP=2894;DP4=1360,1433,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39297e-08;MQSB=0.0384498;RPB=0.433133;SGB=57.786;VDB=0.288901;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.5:6919132 chr05:006919132 0 W/6919132-6919132 FN763-S Single Base Substitution G-A INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN493-S.SNP.5:6924144 chr05:006924144 0 W/6924144-6924144 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2701-S.SNP.5:6924407 chr05:006924407 0 W/6924407-6924407 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.94562;DP=4846;DP4=2215,2241,12,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1784e-08;MQSB=0.867702;RPB=0.997445;SGB=63.4749;VDB=0.949089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.5:6927182 chr05:006927182 0 W/6927182-6927182 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.234835;DP=4503;DP4=1800,2435,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.56892e-10;MQSB=0.97807;RPB=0.591417;SGB=37.1297;VDB=0.650177;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.5:6930604 chr05:006930604 0 W/6930604-6930604 FN888-S Single Base Substitution T-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3452-S.SNP.5:6930885 chr05:006930885 0 W/6930885-6930885 FN3452-S SNP A -> G AC=2;AN=184;BQB=0.852175;DP=2357;DP4=1088,1174,9,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.46375e-10;MQSB=0.998586;RPB=0.32071;SGB=23.2751;VDB=0.745121;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.5:6933730 chr05:006933730 0 W/6933730-6933730 FN2308 SNP A -> T AC=1;AN=192;BQB=0.254659;DP=4670;DP4=2018,2288,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.12601e-08;MQSB=0.428697;RPB=0.747791;SGB=10.4835;VDB=0.395807;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.5:6942827 chr05:006942827 0 W/6942827-6942827 FN765-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3998-S.SNP.5:6949614 chr05:006949614 0 W/6949614-6949614 FN3998-S SNP C -> T AC=1;AN=168;BQB=0.774086;DP=2614;DP4=1074,1380,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.71947e-05;MQSB=0.734277;RPB=0.626902;SGB=7.59999;VDB=0.742057;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.5:6957631 chr05:006957631 0 W/6957631-6957631 FN2112-S SNP T -> A AC=1;AN=168;BQB=0.80267;DP=4108;DP4=2082,1982,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.371e-14;MQSB=0.956161;RPB=0.6688;SGB=69.0561;VDB=0.3694;EFF=UTR_3_PRIME(MODIFIER||74||350|LOC_Os05g12170|protein_coding|CODING|LOC_Os05g12170.1|9|1),UTR_3_PRIME(MODIFIER||74||344|LOC_Os05g12170|protein_coding|CODING|LOC_Os05g12170.2|9|1),UTR_3_PRIME(MODIFIER||74||274|LOC_Os05g12170|protein_coding|CODING|LOC_Os05g12170.4|9|1),UTR_3_PRIME(MODIFIER||74||344|LOC_Os05g12170|protein_coding|CODING|LOC_Os05g12170.5|9|1) FN859-S.SNP.5:6960589 chr05:006960589 0 W/6960589-6960589 FN859-S Single Base Substitution A-T INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1205-S.SNP.5:6962491 chr05:006962491 0 W/6962491-6962491 FN1205-S Single Base Substitution A-C INTRON HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1537-S.SNP.5:6966098 chr05:006966098 0 W/6966098-6966098 FN1537-S Single Base Substitution G-A INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3808-S.SNP.5:6971488 chr05:006971488 0 W/6971488-6971488 FN3808-S SNP G -> T AC=1;AN=190;BQB=0.927001;DP=2489;DP4=1259,1168,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.33456e-06;MQSB=0.941977;RPB=0.413345;SGB=30.8803;VDB=0.523788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.5:6971489 chr05:006971489 0 W/6971489-6971489 FN3808-S SNP A -> T AC=1;AN=190;BQB=0.232022;DP=2477;DP4=1231,1157,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.36233e-06;MQSB=0.959049;RPB=0.32684;SGB=32.5467;VDB=0.568731;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.5:6973322 chr05:006973322 0 W/6973322-6973322 FN378-S Single Base Substitution G-A INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN3782-S.SNP.5:6975153 chr05:006975153 0 W/6975153-6975153 FN3782-S SNP C -> T AC=1;AN=190;BQB=0.994369;DP=2564;DP4=1124,1329,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16526e-05;MQSB=0.978716;RPB=0.337246;SGB=25.439;VDB=0.121318;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.5:6975857 chr05:006975857 0 W/6975857-6975857 FN804-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g12180 chalcone synthase, putative, expressed SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN_N1-213-1.SNP.5:6980375 chr05:006980375 0 W/6980375-6980375 FN_N1-213-1 Single Base Substitution A-G HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN745-S.SNP.5:6982876 chr05:006982876 0 W/6982876-6982876 FN745-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN3651-S.SNP.5:6983912 chr05:006983912 0 W/6983912-6983912 FN3651-S SNP G -> A AC=1;AN=190;BQB=0.451836;DP=2803;DP4=1414,1285,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28686e-07;MQSB=0.967148;RPB=0.792765;SGB=44.5415;VDB=0.00652132;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.5:6987616 chr05:006987616 0 W/6987616-6987616 FN928-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g12200 transposon protein, putative, CACTA, En/Spm sub-class SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3378-S.SNP.5:6988815 chr05:006988815 0 W/6988815-6988815 FN3378-S SNP C -> T AC=1;AN=184;BQB=0.989354;DP=2743;DP4=1208,1398,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.90477e-12;MQSB=0.995637;RPB=0.889605;SGB=63.9222;VDB=0.157542;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.5:6991162 chr05:006991162 0 W/6991162-6991162 FN534-S Single Base Substitution G-T INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN-75.SNP.5:7000523 chr05:007000523 0 W/7000523-7000523 FN-75 Single Base Substitution G-C INTRON HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN75-S-S.SNP.5:7000523 chr05:007000523 0 W/7000523-7000523 FN75-S-S SNP G -> C AC=1;AN=190;BQB=0.999233;DP=4828;DP4=1904,2596,12,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.59198e-15;MQSB=0.980173;RPB=0.508661;SGB=107.178;VDB=0.659214;EFF=INTRON(MODIFIER||||140|LOC_Os05g12230|protein_coding|CODING|LOC_Os05g12230.1|3|1) FN3860-S.SNP.5:7001557 chr05:007001557 0 W/7001557-7001557 FN3860-S SNP A -> T AC=1;AN=158;BQB=0.750392;DP=2121;DP4=1198,853,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.89675e-06;MQSB=0.803908;RPB=0.866572;SGB=27.3346;VDB=0.140184;EFF=INTRON(MODIFIER||||140|LOC_Os05g12230|protein_coding|CODING|LOC_Os05g12230.1|3|1) FN-390.SNP.5:7003202 chr05:007003202 0 W/7003202-7003202 FN-390 Single Base Substitution A-G INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1525-S.SNP.5:7008943 chr05:007008943 0 W/7008943-7008943 FN1525-S Single Base Substitution T-C INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1763-S.SNP.5:7014079 chr05:007014079 0 W/7014079-7014079 FN1763-S SNP C -> T AC=1;AN=188;BQB=0.000343171;DP=4062;DP4=2345,1676,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26398e-05;MQSB=0.999011;RPB=0.997452;SGB=-170.968;VDB=0.0395954;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.5:7014848 chr05:007014848 0 W/7014848-7014848 FN_955-1 Single Base Substitution A-G Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3371-S.SNP.5:7015418 chr05:007015418 0 W/7015418-7015418 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.965998;DP=2755;DP4=1364,1300,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.01364e-08;MQSB=0.998242;RPB=0.557772;SGB=57.786;VDB=0.843751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.5:7021164 chr05:007021164 0 W/7021164-7021164 FN1413-S Single Base Substitution G-T INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2664-S.SNP.5:7022614 chr05:007022614 0 W/7022614-7022614 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.923522;DP=4123;DP4=1436,2412,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.89636e-16;MQSB=0.93458;RPB=0.364683;SGB=79.9264;VDB=0.628034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.5:7022640 chr05:007022640 0 W/7022640-7022640 FN3770-S SNP A -> G AC=1;AN=190;BQB=0.91861;DP=1723;DP4=233,1427,1,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51352e-05;MQSB=0.703583;RPB=0.738586;SGB=30.8803;VDB=0.0258883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.5:7023764 chr05:007023764 0 W/7023764-7023764 FN-206 Single Base Substitution T-C INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN498-S.SNP.5:7024027 chr05:007024027 0 W/7024027-7024027 FN498-S Single Base Substitution T-A INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN601-S.SNP.5:7035034 chr05:007035034 0 W/7035034-7035034 FN601-S Single Base Substitution A-T INTRON HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1445-S.SNP.5:7041908 chr05:007041908 0 W/7041908-7041908 FN1445-S Single Base Substitution A-G INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3955-S.SNP.5:7044444 chr05:007044444 0 W/7044444-7044444 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.940343;DP=2585;DP4=894,1560,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.000386847;MQB=0.496297;MQSB=0.128105;RPB=0.655719;SGB=31.3172;VDB=0.0516518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.5:7049886 chr05:007049886 0 W/7049886-7049886 FN2609-S SNP A -> T AC=1;AN=198;BQB=0.798539;DP=3149;DP4=1454,1533,17,6;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.000635122;MQB=0.0144988;MQSB=0.134009;RPB=0.0353677;SGB=72.5051;VDB=0.736993;EFF=UTR_3_PRIME(MODIFIER||333||193|LOC_Os05g12280|protein_coding|CODING|LOC_Os05g12280.1|1|1) FN549-S.SNP.5:7051921 chr05:007051921 0 W/7051921-7051921 FN549-S Single Base Substitution C-G INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2650-S.SNP.5:7054162 chr05:007054162 0 W/7054162-7054162 FN2650-S SNP A -> C AC=1;AN=200;BQB=0.993594;DP=4870;DP4=2613,2006,10,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.00341644;MQSB=4.74413e-08;RPB=0.960146;SGB=29.4849;VDB=0.217265;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.5:7054396 chr05:007054396 0 W/7054396-7054396 FN447-S Single Base Substitution G-A INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2265-S.SNP.5:7064636 chr05:007064636 0 W/7064636-7064636 FN2265-S SNP A -> T AC=1;AN=190;BQB=0.968594;DP=4710;DP4=2060,2320,22,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.30929e-15;MQSB=0.83739;RPB=0.999479;SGB=92.9626;VDB=0.386413;EFF=SPLICE_SITE_REGION(LOW||||120|LOC_Os05g12300|protein_coding|CODING|LOC_Os05g12300.3|2|1),UTR_3_PRIME(MODIFIER||1895||120|LOC_Os05g12300|protein_coding|CODING|LOC_Os05g12300.2|2|1),INTRON(MODIFIER||||120|LOC_Os05g12300|protein_coding|CODING|LOC_Os05g12300.1|2|1),INTRON(MODIFIER||||120|LOC_Os05g12300|protein_coding|CODING|LOC_Os05g12300.3|2|1) FN-215.SNP.5:7090673 chr05:007090673 0 W/7090673-7090673 FN-215 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g12340 retrotransposon protein, putative, unclassified, expressed SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1234-S.SNP.5:7091693 chr05:007091693 0 W/7091693-7091693 FN1234-S Single Base Substitution G-T INTRON HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN496-S.SNP.5:7097216 chr05:007097216 0 W/7097216-7097216 FN496-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g12350 retrotransposon protein, putative, unclassified, expressed SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2658-S.SNP.5:7118297 chr05:007118297 0 W/7118297-7118297 FN2658-S SNP T -> C AC=1;AN=200;BQB=0.461024;DP=4790;DP4=2307,2228,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12391e-12;MQSB=0.520775;RPB=0.862105;SGB=50.3263;VDB=0.869694;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.5:7125642 chr05:007125642 0 W/7125642-7125642 FN-325 Single Base Substitution A-G INTRON HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1403-S.SNP.5:7128914 chr05:007128914 0 W/7128914-7128914 FN1403-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN3839-S.SNP.5:7133926 chr05:007133926 0 W/7133926-7133926 FN3839-S SNP A -> G AC=1;AN=190;BQB=0.916333;DP=2772;DP4=1327,1286,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.90532e-13;MQSB=0.998707;RPB=0.950698;SGB=14.9883;VDB=0.448333;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.5:7139870 chr05:007139870 0 W/7139870-7139870 FN-399 Single Base Substitution A-G INTRON HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN1631-S.SNP.5:7142261 chr05:007142261 0 W/7142261-7142261 FN1631-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g12420 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3845-S.SNP.5:7142691 chr05:007142691 0 W/7142691-7142691 FN3845-S SNP T -> C AC=1;AN=190;BQB=0.997857;DP=2763;DP4=1408,1261,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.60709e-08;MQSB=0.884113;RPB=0.973174;SGB=46.7622;VDB=0.287158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.5:7147194 chr05:007147194 0 W/7147194-7147194 FN1015-S Single Base Substitution T-A INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1528-S.SNP.5:7148610 chr05:007148610 0 W/7148610-7148610 FN1528-S Single Base Substitution T-A INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2181-S.SNP.5:7150376 chr05:007150376 0 W/7150376-7150376 FN2181-S SNP G -> A AC=2;AN=190;BQB=0.668055;DP=4379;DP4=2168,1908,27,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.66689e-25;MQSB=0.982763;RPB=0.764149;SGB=60.0507;VDB=0.112413;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-S.SNP.5:7154107 chr05:007154107 0 W/7154107-7154107 FN1554-S Single Base Substitution G-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN708-S.SNP.5:7158067 chr05:007158067 0 W/7158067-7158067 FN708-S Single Base Substitution C-T INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN764-S.SNP.5:7165376 chr05:007165376 0 W/7165376-7165376 FN764-S Single Base Substitution A-T INTRON HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-152.SNP.5:7167061 chr05:007167061 0 W/7167061-7167061 FN-152 Single Base Substitution C-T INTRON HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN432-S.SNP.5:7167186 chr05:007167186 0 W/7167186-7167186 FN432-S Single Base Substitution T-G INTRON HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1336-S.SNP.5:7181415 chr05:007181415 0 W/7181415-7181415 FN1336-S Single Base Substitution T-A INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3853-S.SNP.5:7195889 chr05:007195889 0 W/7195889-7195889 FN3853-S SNP A -> G AC=2;AN=158;BQB=0.998555;DP=2612;DP4=1032,1377,11,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.16235e-10;MQSB=0.917289;RPB=0.76541;SGB=57.6596;VDB=0.681862;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.5:7198187 chr05:007198187 0 W/7198187-7198187 FN_829-2-5 Single Base Substitution A-G HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2650-S.SNP.5:7206077 chr05:007206077 0 W/7206077-7206077 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.0638148;DP=4674;DP4=2099,2299,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000427899;MQB=4.91476e-10;MQSB=0.0176812;RPB=0.84324;SGB=69.1109;VDB=0.71803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.5:7208417 chr05:007208417 0 W/7208417-7208417 FN3502-S SNP C -> G AC=2;AN=188;BQB=0.978069;DP=3455;DP4=1798,1553,11,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.5198e-12;MQSB=0.893978;RPB=0.119235;SGB=98.9552;VDB=0.96969;EFF=INTRON(MODIFIER||||296|LOC_Os05g12560|protein_coding|CODING|LOC_Os05g12560.1|2|1) FN715-S.SNP.5:7208909 chr05:007208909 0 W/7208909-7208909 FN715-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1634-S.SNP.5:7208984 chr05:007208984 0 W/7208984-7208984 FN1634-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g12560 expressed protein SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1374-S.SNP.5:7209213 chr05:007209213 0 W/7209213-7209213 FN1374-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2283.SNP.5:7210686 chr05:007210686 0 W/7210686-7210686 FN2283 SNP G -> A AC=1;AN=192;BQB=0.929251;DP=4610;DP4=2415,1872,22,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.9277e-20;MQSB=0.907517;RPB=0.798735;SGB=38.6418;VDB=0.392857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.5:7211891 chr05:007211891 0 W/7211891-7211891 FN2278-S SNP G -> T AC=1;AN=190;BQB=0.871115;DP=4712;DP4=2101,2301,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49777e-06;MQSB=0.985733;RPB=0.834868;SGB=39.6545;VDB=0.392815;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A55|1104|LOC_Os05g12570|protein_coding|CODING|LOC_Os05g12570.1|1|1) FN2268-S.SNP.5:7213673 chr05:007213673 0 W/7213673-7213673 FN2268-S SNP T -> G AC=2;AN=190;BQB=0.979419;DP=4367;DP4=1987,2021,27,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.03092e-30;MQSB=0.611242;RPB=0.23832;SGB=276.789;VDB=0.116534;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taG|Y604*|1104|LOC_Os05g12570|protein_coding|CODING|LOC_Os05g12570.1|2|1);LOF=(LOC_Os05g12570|LOC_Os05g12570|1|1.00);NMD=(LOC_Os05g12570|LOC_Os05g12570|1|1.00) FN3105-S.SNP.5:7214283 chr05:007214283 0 W/7214283-7214283 FN3105-S SNP G -> C AC=1;AN=184;BQB=0.998463;DP=2854;DP4=1361,1409,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05861e-10;MQSB=0.849622;RPB=0.896523;SGB=80.3949;VDB=0.72357;EFF=INTRON(MODIFIER||||1104|LOC_Os05g12570|protein_coding|CODING|LOC_Os05g12570.1|2|1) FN3481-S.SNP.5:7214283 chr05:007214283 0 W/7214283-7214283 FN3481-S SNP G -> C AC=2;AN=184;BQB=0.587075;DP=2736;DP4=1305,1331,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.25751e-19;MQSB=0.896998;RPB=0.998452;SGB=161.787;VDB=0.782745;EFF=INTRON(MODIFIER||||1104|LOC_Os05g12570|protein_coding|CODING|LOC_Os05g12570.1|2|1) FN3985-S.SNP.5:7219125 chr05:007219125 0 W/7219125-7219125 FN3985-S SNP A -> G AC=2;AN=168;BQB=0.955222;DP=1786;DP4=913,749,14,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.89764e-15;MQSB=0.528075;RPB=0.583102;SGB=79.3486;VDB=0.722423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.5:7220292 chr05:007220292 0 W/7220292-7220292 FN3999-S SNP T -> G AC=2;AN=168;BQB=0.855953;DP=3154;DP4=1241,1703,8,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.13571e-10;MQSB=0.74567;RPB=0.786864;SGB=14.2064;VDB=0.89032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.5:7226938 chr05:007226938 0 W/7226938-7226938 FN1061-S Single Base Substitution T-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN358-S.SNP.5:7229018 chr05:007229018 0 W/7229018-7229018 FN358-S Single Base Substitution G-A INTERGENIC HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2280-S.SNP.5:7232266 chr05:007232266 0 W/7232266-7232266 FN2280-S SNP T -> C AC=1;AN=190;BQB=0.752851;DP=3718;DP4=1846,1477,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.41814e-06;MQSB=0.770138;RPB=0.999966;SGB=-11.0065;VDB=0.881404;EFF=INTRON(MODIFIER||||151|LOC_Os05g12600|protein_coding|CODING|LOC_Os05g12600.1|1|1) FN903-S.SNP.5:7233738 chr05:007233738 0 W/7233738-7233738 FN903-S Single Base Substitution G-A INTERGENIC HOMO SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1097-S.SNP.5:7235833 chr05:007235833 0 W/7235833-7235833 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-114.SNP.5:7247048 chr05:007247048 0 W/7247048-7247048 FN-114 Single Base Substitution G-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN414-S.SNP.5:7275038 chr05:007275038 0 W/7275038-7275038 FN414-S Single Base Substitution T-A INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN323-S.SNP.5:7286143 chr05:007286143 0 W/7286143-7286143 FN323-S Single Base Substitution A-G INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1638-S.SNP.5:7286847 chr05:007286847 0 W/7286847-7286847 FN1638-S Single Base Substitution A-G INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN-278.SNP.5:7292286 chr05:007292286 0 W/7292286-7292286 FN-278 Single Base Substitution G-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3792-S.SNP.5:7292995 chr05:007292995 0 W/7292995-7292995 FN3792-S SNP A -> G AC=1;AN=190;BQB=0.99467;DP=2505;DP4=1047,1384,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4037e-06;MQSB=0.281848;RPB=0.682994;SGB=49.0954;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.5:7296695 chr05:007296695 0 W/7296695-7296695 FN-155 Single Base Substitution C-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3700-S.SNP.5:7314245 chr05:007314245 0 W/7314245-7314245 FN3700-S SNP G -> T AC=1;AN=190;BQB=0.877297;DP=3304;DP4=1681,1483,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79357e-11;MQSB=0.908049;RPB=0.903827;SGB=36.4291;VDB=0.260787;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.5:7316176 chr05:007316176 0 W/7316176-7316176 FN1206-S Single Base Substitution A-T INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN2774-S.SNP.5:7317258 chr05:007317258 0 W/7317258-7317258 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.276069;DP=3683;DP4=1892,1624,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.15788e-09;MQSB=0.702555;RPB=0.874014;SGB=81.7147;VDB=0.906762;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.5:7320768 chr05:007320768 0 W/7320768-7320768 W466-5-1 Single Base Substitution T-G INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2609-S.SNP.5:7325123 chr05:007325123 0 W/7325123-7325123 FN2609-S SNP T -> C AC=2;AN=198;BQB=0.486267;DP=4553;DP4=2034,2193,33,34;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.4788e-39;MQSB=0.913031;RPB=0.910396;SGB=258.609;VDB=0.0125231;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.5:7338119 chr05:007338119 0 W/7338119-7338119 FN-226 Single Base Substitution C-T INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN752-S.SNP.5:7340023 chr05:007340023 0 W/7340023-7340023 FN752-S Single Base Substitution A-C INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1624-S.SNP.5:7345320 chr05:007345320 0 W/7345320-7345320 FN1624-S Single Base Substitution A-G INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN921-S.SNP.5:7350166 chr05:007350166 0 W/7350166-7350166 FN921-S Single Base Substitution T-A INTRON HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN541-S.SNP.5:7352366 chr05:007352366 0 W/7352366-7352366 FN541-S Single Base Substitution G-A INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4142-S.SNP.5:7354574 chr05:007354574 0 W/7354574-7354574 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.881171;DP=5006;DP4=2296,2568,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=0.0334432;MQSB=8.06644e-07;RPB=0.924033;SGB=65.6427;VDB=0.00265046;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.5:7356709 chr05:007356709 0 W/7356709-7356709 FN-127 Single Base Substitution C-T INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN921-S.SNP.5:7359933 chr05:007359933 0 W/7359933-7359933 FN921-S Single Base Substitution C-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN921-S.SNP.5:7359936 chr05:007359936 0 W/7359936-7359936 FN921-S Single Base Substitution G-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN1049-S.SNP.5:7379723 chr05:007379723 0 W/7379723-7379723 FN1049-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g13320 C4-dicarboxylate transporter/malic acid transport protein, expressed SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN411-S.SNP.5:7386439 chr05:007386439 0 W/7386439-7386439 FN411-S Single Base Substitution T-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN467-S.SNP.5:7395014 chr05:007395014 0 W/7395014-7395014 FN467-S Single Base Substitution A-G INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1679-S.SNP.5:7397978 chr05:007397978 0 W/7397978-7397978 FN1679-S SNP T -> C AC=2;AN=188;BQB=0.887337;DP=3797;DP4=1909,1819,19,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.50571e-27;MQSB=0.949362;RPB=0.930492;SGB=207.994;VDB=0.7905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.5:7407708 chr05:007407708 0 W/7407708-7407708 FN1379-S Single Base Substitution C-T INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN4206-S.SNP.5:7407708 chr05:007407708 0 W/7407708-7407708 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.987436;DP=2448;DP4=1258,1102,13,2;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=6.35639e-05;MQSB=0.890925;RPB=0.963149;SGB=61.2001;VDB=0.00368286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.5:7409407 chr05:007409407 0 W/7409407-7409407 FN2600-S SNP C -> G AC=1;AN=198;BQB=0.944683;DP=3861;DP4=1701,1914,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=5.98483e-08;MQSB=0.680307;RPB=0.793205;SGB=44.9151;VDB=0.0104907;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.5:7414067 chr05:007414067 0 W/7414067-7414067 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1399-S.SNP.5:7422762 chr05:007422762 0 W/7422762-7422762 FN1399-S Single Base Substitution T-C INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1399-S.SNP.5:7422781 chr05:007422781 0 W/7422781-7422781 FN1399-S Single Base Substitution T-C INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2216-S.SNP.5:7424853 chr05:007424853 0 W/7424853-7424853 FN2216-S SNP C -> T AC=1;AN=190;BQB=0.683868;DP=4671;DP4=2303,2092,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000428174;MQB=1.57109e-08;MQSB=0.0283347;RPB=0.242445;SGB=82.301;VDB=0.748055;EFF=INTRON(MODIFIER||||621|LOC_Os05g13380|protein_coding|CODING|LOC_Os05g13380.1|4|1) FN1755-S.SNP.5:7435341 chr05:007435341 0 W/7435341-7435341 FN1755-S SNP G -> A AC=1;AN=188;BQB=0.14768;DP=1940;DP4=958,922,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.25574e-06;MQSB=0.92294;RPB=0.22305;SGB=43.0708;VDB=0.727171;EFF=INTRON(MODIFIER||||351|LOC_Os05g13390|protein_coding|CODING|LOC_Os05g13390.1|1|1) FN426-S.SNP.5:7437646 chr05:007437646 0 W/7437646-7437646 FN426-S Single Base Substitution A-G INTRON HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN2609-S.SNP.5:7446151 chr05:007446151 0 W/7446151-7446151 FN2609-S SNP T -> A AC=1;AN=198;BQB=0.976425;DP=4215;DP4=2013,2002,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=4.13746e-10;MQSB=0.357046;RPB=0.993378;SGB=123.071;VDB=0.749836;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.5:7446645 chr05:007446645 0 W/7446645-7446645 FN3877-S SNP T -> C AC=2;AN=158;BQB=0.743438;DP=2518;DP4=1118,1240,21,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.17027e-21;MQSB=0.997024;RPB=0.891055;SGB=151.934;VDB=0.689198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T165A|211|LOC_Os05g13420|protein_coding|CODING|LOC_Os05g13420.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D142G|171|LOC_Os05g13420|protein_coding|CODING|LOC_Os05g13420.2|3|1) FN1456-S.SNP.5:7447176 chr05:007447176 0 W/7447176-7447176 FN1456-S Single Base Substitution A-G UTR_5_PRIME Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2407.SNP.5:7461658 chr05:007461658 0 W/7461658-7461658 FN2407 SNP C -> T AC=1;AN=200;BQB=0.996048;DP=4407;DP4=2090,2069,7,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.92162e-06;MQSB=0.636788;RPB=0.992749;SGB=51.0851;VDB=0.632343;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.5:7462681 chr05:007462681 0 W/7462681-7462681 FN715-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g13450 retrotransposon protein, putative, unclassified, expressed SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN3456-S.SNP.5:7471296 chr05:007471296 0 W/7471296-7471296 FN3456-S SNP C -> A AC=1;AN=184;BQB=0.98923;DP=3050;DP4=1535,1408,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.41513e-08;MQSB=0.789047;RPB=0.21788;SGB=2.23696;VDB=0.11944;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E163*|1398|LOC_Os05g13460|protein_coding|CODING|LOC_Os05g13460.1|1|1);LOF=(LOC_Os05g13460|LOC_Os05g13460|1|1.00);NMD=(LOC_Os05g13460|LOC_Os05g13460|1|1.00) FN2614-S.SNP.5:7474094 chr05:007474094 0 W/7474094-7474094 FN2614-S SNP A -> G AC=1;AN=198;BQB=0.295119;DP=4491;DP4=2116,2153,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.03271e-09;MQSB=0.884238;RPB=0.977972;SGB=6.15916;VDB=0.105604;EFF=INTRON(MODIFIER||||377|LOC_Os05g13470|protein_coding|CODING|LOC_Os05g13470.1|1|1) FN1268-S.SNP.5:7475076 chr05:007475076 0 W/7475076-7475076 FN1268-S Single Base Substitution A-T INTRON HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN516-S.SNP.5:7477545 chr05:007477545 0 W/7477545-7477545 FN516-S Single Base Substitution T-C INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN3662-S.SNP.5:7479055 chr05:007479055 0 W/7479055-7479055 FN3662-S SNP A -> C AC=2;AN=190;BQB=0.992587;DP=3045;DP4=1568,1322,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.59107e-17;MQSB=0.828402;RPB=0.984479;SGB=67.0756;VDB=0.402682;EFF=INTRON(MODIFIER||||289|LOC_Os05g13490|protein_coding|CODING|LOC_Os05g13490.1|1|1) FN3698-S.SNP.5:7482553 chr05:007482553 0 W/7482553-7482553 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.572039;DP=2533;DP4=1119,1252,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.65176e-05;MQSB=0.0521032;RPB=0.733515;SGB=18.3316;VDB=0.183821;EFF=INTRON(MODIFIER||||115|LOC_Os05g13500|protein_coding|CODING|LOC_Os05g13500.1|2|1) FN2252-S.SNP.5:7484934 chr05:007484934 0 W/7484934-7484934 FN2252-S SNP G -> A AC=1;AN=190;BQB=0.905256;DP=4643;DP4=1985,2214,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.67795e-05;MQSB=0.984849;RPB=0.913617;SGB=39.9877;VDB=0.482741;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.5:7488290 chr05:007488290 0 W/7488290-7488290 FN808-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g13510 retrotransposon protein, putative, unclassified, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN2252-S.SNP.5:7490704 chr05:007490704 0 W/7490704-7490704 FN2252-S SNP C -> G AC=1;AN=190;BQB=0.601137;DP=4982;DP4=2205,2304,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00481734;MQB=4.65635e-05;MQSB=0.9324;RPB=0.997957;SGB=35.4339;VDB=0.10981;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccG|P1318|1399|LOC_Os05g13510|protein_coding|CODING|LOC_Os05g13510.1|2|1) FN4190-S.SNP.5:7492881 chr05:007492881 0 W/7492881-7492881 FN4190-S SNP T -> C AC=1;AN=170;BQB=0.957296;DP=2696;DP4=1481,1117,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.50042e-06;MQSB=0.96163;RPB=0.327444;SGB=34.5445;VDB=0.303697;EFF=UTR_3_PRIME(MODIFIER||224||700|LOC_Os05g13520|protein_coding|CODING|LOC_Os05g13520.1|8|1) FN1301-S.SNP.5:7495522 chr05:007495522 0 W/7495522-7495522 FN1301-S Single Base Substitution A-G INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2183-S.SNP.5:7498733 chr05:007498733 0 W/7498733-7498733 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.51888;DP=4109;DP4=1506,2304,20,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.78843e-20;MQSB=0.154247;RPB=0.785203;SGB=44.5119;VDB=0.833664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.5:7501555 chr05:007501555 0 W/7501555-7501555 FN1024-S Single Base Substitution C-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-156.SNP.5:7504978 chr05:007504978 0 W/7504978-7504978 FN-156 Single Base Substitution C-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN1129-S.SNP.5:7505312 chr05:007505312 0 W/7505312-7505312 FN1129-S Single Base Substitution C-T INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN689-S.SNP.5:7510813 chr05:007510813 0 W/7510813-7510813 FN689-S Single Base Substitution G-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2353.SNP.5:7510868 chr05:007510868 0 W/7510868-7510868 FN2353 SNP C -> T AC=1;AN=192;BQB=0.561007;DP=4874;DP4=2294,2265,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.46904e-07;MQSB=0.869341;RPB=0.194011;SGB=4.22611;VDB=0.376277;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.5:7512386 chr05:007512386 0 W/7512386-7512386 FN-105 Single Base Substitution G-T INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN3381-S.SNP.5:7521406 chr05:007521406 0 W/7521406-7521406 FN3381-S SNP G -> C AC=1;AN=184;BQB=0.931609;DP=3673;DP4=1843,1726,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.39586e-09;MQSB=0.987803;RPB=0.75948;SGB=71.3514;VDB=0.5004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R83G|98|LOC_Os05g13560|protein_coding|CODING|LOC_Os05g13560.1|1|1) FN3443-S.SNP.5:7524933 chr05:007524933 0 W/7524933-7524933 FN3443-S SNP G -> C AC=1;AN=184;BQB=0.49806;DP=2789;DP4=1273,1427,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43628e-08;MQSB=0.618988;RPB=0.882246;SGB=49.835;VDB=0.288847;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.5:7532769 chr05:007532769 0 W/7532769-7532769 FN3675-S SNP A -> T AC=1;AN=190;BQB=0.973877;DP=2544;DP4=712,1731,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000786163;MQB=5.07432e-06;MQSB=7.22815e-09;RPB=0.181247;SGB=13.4442;VDB=0.0783527;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.5:7535590 chr05:007535590 0 W/7535590-7535590 FN358-S Single Base Substitution C-T INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1668-S.SNP.5:7536407 chr05:007536407 0 W/7536407-7536407 FN1668-S SNP A -> T AC=1;AN=188;BQB=0.0547453;DP=3101;DP4=1404,1654,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.58145e-06;MQSB=0.996118;RPB=0.528901;SGB=26.0762;VDB=0.742898;EFF=INTRON(MODIFIER||||186|LOC_Os05g13590|protein_coding|CODING|LOC_Os05g13590.1|4|1) FN777-S.SNP.5:7537819 chr05:007537819 0 W/7537819-7537819 FN777-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g13590 expressed protein SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN3673-S.SNP.5:7538549 chr05:007538549 0 W/7538549-7538549 FN3673-S SNP C -> T AC=1;AN=190;BQB=0.836444;DP=3036;DP4=1482,1329,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.35394e-10;MQSB=0.816332;RPB=0.635323;SGB=71.8647;VDB=0.502001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A35T|186|LOC_Os05g13590|protein_coding|CODING|LOC_Os05g13590.1|2|1) FN2608-S.SNP.5:7539250 chr05:007539250 0 W/7539250-7539250 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.956708;DP=4222;DP4=1880,2067,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.39737e-06;MQSB=0.116851;RPB=0.757831;SGB=44.9538;VDB=0.658291;EFF=INTRON(MODIFIER||||186|LOC_Os05g13590|protein_coding|CODING|LOC_Os05g13590.1|1|1) FN2372.SNP.5:7543483 chr05:007543483 0 W/7543483-7543483 FN2372 SNP G -> A AC=1;AN=192;BQB=0.179788;DP=4716;DP4=2199,2231,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000848176;MQB=8.09982e-13;MQSB=0.454767;RPB=0.998064;SGB=103.938;VDB=0.211592;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q186|211|LOC_Os05g13600|protein_coding|CODING|LOC_Os05g13600.1|3|1) FN3542-S.SNP.5:7552571 chr05:007552571 0 W/7552571-7552571 FN3542-S SNP A -> G AC=1;AN=188;BQB=0.999092;DP=3069;DP4=1693,1270,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11214e-06;MQSB=0.963183;RPB=0.995158;SGB=39.8925;VDB=0.409296;EFF=UTR_5_PRIME(MODIFIER||27||104|LOC_Os05g13620|protein_coding|CODING|LOC_Os05g13620.1|1|1) FN2337.SNP.5:7555568 chr05:007555568 0 W/7555568-7555568 FN2337 SNP T -> C AC=2;AN=192;BQB=0.699625;DP=5129;DP4=2167,2591,20,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.70941e-21;MQSB=0.920012;RPB=0.999228;SGB=85.3296;VDB=0.2838;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.5:7556626 chr05:007556626 0 W/7556626-7556626 FN4189-S SNP T -> G AC=2;AN=170;BQB=0.991048;DP=2860;DP4=1394,1326,12,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.18865e-11;MQSB=0.951033;RPB=0.574535;SGB=36.9825;VDB=0.0331921;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.5:7556627 chr05:007556627 0 W/7556627-7556627 FN4189-S SNP T -> C AC=2;AN=170;BQB=0.999987;DP=2865;DP4=1405,1355,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.43546e-12;MQSB=0.935323;RPB=0.796305;SGB=78.9707;VDB=0.090589;EFF=INTERGENIC(MODIFIER||||||||||1) FN322-S.SNP.5:7558716 chr05:007558716 0 W/7558716-7558716 FN322-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g13630 RNA recognition motif containing protein, putative, expressed SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN1726-S.SNP.5:7560941 chr05:007560941 0 W/7560941-7560941 FN1726-S SNP G -> A AC=1;AN=188;BQB=0.985322;DP=2657;DP4=1524,1105,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.41073e-07;MQSB=0.365507;RPB=0.724097;SGB=-15.5431;VDB=0.110236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.5:7573941 chr05:007573941 0 W/7573941-7573941 FN2794-S SNP A -> T AC=1;AN=198;BQB=0.926028;DP=4077;DP4=1861,1977,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.96527e-18;MQSB=0.856763;RPB=0.770498;SGB=65.676;VDB=0.619337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.5:7587233 chr05:007587233 0 W/7587233-7587233 FN-283 Single Base Substitution G-A INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3432-S.SNP.5:7588386 chr05:007588386 0 W/7588386-7588386 FN3432-S SNP C -> A AC=2;AN=184;BQB=0.877115;DP=2673;DP4=1167,1385,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.72543e-17;MQSB=0.990119;RPB=0.995252;SGB=116.569;VDB=0.0537149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.5:7588387 chr05:007588387 0 W/7588387-7588387 FN3432-S SNP C -> T AC=2;AN=184;BQB=0.833173;DP=2679;DP4=1175,1403,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.79975e-17;MQSB=0.991232;RPB=0.961428;SGB=116.569;VDB=0.0521078;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.5:7592009 chr05:007592009 0 W/7592009-7592009 FN1371-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os05g13700 retrotransposon protein, putative, unclassified, expressed SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3407-S.SNP.5:7596864 chr05:007596864 0 W/7596864-7596864 FN3407-S SNP T -> G AC=2;AN=184;BQB=0.996586;DP=3236;DP4=1268,1842,6,11;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.00556242;MQB=0.942727;MQSB=0.840741;RPB=0.143662;SGB=71.3514;VDB=0.063779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.5:7597390 chr05:007597390 0 W/7597390-7597390 FN2541-S SNP C -> A AC=1;AN=198;BQB=0.633289;DP=3100;DP4=1818,1057,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00483871;MQB=0.000100234;MQSB=0.963357;RPB=0.98529;SGB=40.149;VDB=0.550319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.5:7599077 chr05:007599077 0 W/7599077-7599077 FN2289 SNP T -> A AC=1;AN=192;BQB=0.944513;DP=6243;DP4=3612,2169,28,28;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.127343;MQB=0.000144237;MQSB=0.865662;RPB=1;SGB=-1324.5;VDB=0.00288298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.5:7609443 chr05:007609443 0 W/7609443-7609443 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.436692;DP=2629;DP4=1653,938,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.035755;MQB=0.143033;MQSB=2.10938e-13;RPB=0.115431;SGB=55.3328;VDB=0.140396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.5:7611148 chr05:007611148 0 W/7611148-7611148 FN1158-S Single Base Substitution G-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2279-S.SNP.5:7611148 chr05:007611148 0 W/7611148-7611148 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.400993;DP=10546;DP4=6404,3750,22,33;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.263797;MQB=0.448114;MQSB=0;RPB=0.527523;SGB=185.363;VDB=0.894783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.5:7611148 chr05:007611148 0 W/7611148-7611148 FN2348 SNP G -> A AC=1;AN=192;BQB=0.0294965;DP=10555;DP4=6487,3708,28,23;HOB=5.42535e-05;ICB=0.000109072;MQ=20;MQ0F=0.259877;MQB=0.000211258;MQSB=0;RPB=0.0383789;SGB=4.98351;VDB=0.960263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.5:7611148 chr05:007611148 0 W/7611148-7611148 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.991558;DP=10534;DP4=6401,3721,21,21;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.249003;MQB=0.00019023;MQSB=0;RPB=0.0546643;SGB=187.814;VDB=0.939427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.5:7613903 chr05:007613903 0 W/7613903-7613903 FN3110-S SNP C -> T AC=1;AN=184;BQB=0.991794;DP=2772;DP4=1347,1358,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0036075;MQB=0.000358092;MQSB=0.961841;RPB=0.904539;SGB=30.6558;VDB=0.0760875;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q356*|1041|LOC_Os05g13740|protein_coding|CODING|LOC_Os05g13740.1|5|1);LOF=(LOC_Os05g13740|LOC_Os05g13740|1|1.00);NMD=(LOC_Os05g13740|LOC_Os05g13740|1|1.00) FN4249-S.SNP.5:7626126 chr05:007626126 0 W/7626126-7626126 FN4249-S SNP T -> C AC=2;AN=170;BQB=0.808298;DP=2685;DP4=999,1566,8,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.59513e-14;MQSB=0.467929;RPB=0.941715;SGB=65.8619;VDB=0.972075;EFF=INTRON(MODIFIER||||143|LOC_Os05g13760|protein_coding|CODING|LOC_Os05g13760.1|1|1) FN1158-S.SNP.5:7629709 chr05:007629709 0 W/7629709-7629709 FN1158-S Single Base Substitution C-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3770-S.SNP.5:7635143 chr05:007635143 0 W/7635143-7635143 FN3770-S SNP A -> T AC=1;AN=190;BQB=0.750168;DP=2946;DP4=1332,1532,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05336e-05;MQSB=0.8394;RPB=0.729967;SGB=49.0954;VDB=0.358505;EFF=INTRON(MODIFIER||||1407|LOC_Os05g13780|protein_coding|CODING|LOC_Os05g13780.1|21|1) FN2755-S.SNP.5:7640675 chr05:007640675 0 W/7640675-7640675 FN2755-S SNP A -> T AC=2;AN=200;BQB=0.979862;DP=4909;DP4=2166,2496,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.52205e-25;MQSB=0.877872;RPB=0.777897;SGB=3.22936;VDB=0.29421;EFF=INTRON(MODIFIER||||1407|LOC_Os05g13780|protein_coding|CODING|LOC_Os05g13780.1|9|1) FN-208.SNP.5:7649831 chr05:007649831 0 W/7649831-7649831 FN-208 Single Base Substitution T-C INTRON HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-305.SNP.5:7650721 chr05:007650721 0 W/7650721-7650721 FN-305 Single Base Substitution G-A INTRON HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3880-S.SNP.5:7657612 chr05:007657612 0 W/7657612-7657612 FN3880-S SNP A -> C AC=1;AN=158;BQB=0.922872;DP=2439;DP4=1264,1091,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.42099e-07;MQSB=0.916503;RPB=0.936158;SGB=51.4366;VDB=0.831517;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.5:7663366 chr05:007663366 0 W/7663366-7663366 FN-403 Single Base Substitution G-A INTERGENIC HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN2372.SNP.5:7663366 chr05:007663366 0 W/7663366-7663366 FN2372 SNP G -> A AC=1;AN=192;BQB=0.774088;DP=4824;DP4=2367,2090,20,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.90614e-17;MQSB=0.912555;RPB=0.993679;SGB=32.3844;VDB=0.514379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.5:7663366 chr05:007663366 0 W/7663366-7663366 FN2407 SNP G -> A AC=2;AN=200;BQB=0.578651;DP=4519;DP4=2108,2075,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.44052e-20;MQSB=0.981619;RPB=0.57023;SGB=130.399;VDB=0.47783;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.5:7663366 chr05:007663366 0 W/7663366-7663366 FN403-S Single Base Substitution G-A INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3851-S.SNP.5:7675888 chr05:007675888 0 W/7675888-7675888 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.998983;DP=2392;DP4=1218,1036,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.79523e-08;MQSB=0.395674;RPB=0.698336;SGB=68.9144;VDB=0.489196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.5:7676719 chr05:007676719 0 W/7676719-7676719 FN-362 Single Base Substitution C-G INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN402-S.SNP.5:7677131 chr05:007677131 0 W/7677131-7677131 FN402-S Single Base Substitution G-A INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN446-S.SNP.5:7679523 chr05:007679523 0 W/7679523-7679523 FN446-S Single Base Substitution G-A INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1443-S.SNP.5:7679900 chr05:007679900 0 W/7679900-7679900 FN1443-S Single Base Substitution C-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN950-S.SNP.5:7697982 chr05:007697982 0 W/7697982-7697982 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1566-S.SNP.5:7699442 chr05:007699442 0 W/7699442-7699442 FN1566-S Single Base Substitution C-T INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN1566-S.SNP.5:7699444 chr05:007699444 0 W/7699444-7699444 FN1566-S Single Base Substitution G-A INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2421.SNP.5:7708015 chr05:007708015 0 W/7708015-7708015 FN2421 SNP T -> A AC=1;AN=200;BQB=0.929396;DP=4873;DP4=2304,2308,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9043e-10;MQSB=0.901974;RPB=0.625454;SGB=9.48993;VDB=0.685519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.5:7728016 chr05:007728016 0 W/7728016-7728016 FN1042-S Single Base Substitution C-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN-87.SNP.5:7728112 chr05:007728112 0 W/7728112-7728112 FN-87 Single Base Substitution C-G INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1128-S.SNP.5:7732920 chr05:007732920 0 W/7732920-7732920 FN1128-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g13910 retrotransposon protein, putative, unclassified, expressed SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1741-S.SNP.5:7733443 chr05:007733443 0 W/7733443-7733443 FN1741-S SNP C -> G AC=1;AN=188;BQB=0.977928;DP=1363;DP4=761,548,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00366838;MQB=1.08466e-05;MQSB=0.996603;RPB=0.998689;SGB=28.8977;VDB=0.54107;EFF=INTRON(MODIFIER||||823|LOC_Os05g13910|protein_coding|CODING|LOC_Os05g13910.1|1|1) FN1566-S.SNP.5:7747956 chr05:007747956 0 W/7747956-7747956 FN1566-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g13940 retrotransposon protein, putative, unclassified, expressed SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2689-S.SNP.5:7752087 chr05:007752087 0 W/7752087-7752087 FN2689-S SNP A -> G AC=1;AN=200;BQB=0.551035;DP=4994;DP4=2209,2606,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13222e-08;MQSB=0.941391;RPB=0.960697;SGB=4.67442;VDB=0.41025;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.5:7752349 chr05:007752349 0 W/7752349-7752349 FN737-S Single Base Substitution G-A INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN4275-S.SNP.5:7752912 chr05:007752912 0 W/7752912-7752912 FN4275-S SNP T -> C AC=1;AN=170;BQB=0.73363;DP=2315;DP4=1058,1155,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53283e-05;MQSB=0.995598;RPB=0.997261;SGB=24.5502;VDB=0.0199125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.5:7753781 chr05:007753781 0 W/7753781-7753781 FN1383-S Single Base Substitution T-C INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN760-S.SNP.5:7758900 chr05:007758900 0 W/7758900-7758900 FN760-S Single Base Substitution G-A INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN760-S.SNP.5:7758901 chr05:007758901 0 W/7758901-7758901 FN760-S Single Base Substitution T-A INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1566-S.SNP.5:7773186 chr05:007773186 0 W/7773186-7773186 FN1566-S Single Base Substitution C-T INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3570-S.SNP.5:7783236 chr05:007783236 0 W/7783236-7783236 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.204494;DP=2801;DP4=1537,1180,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000346314;MQSB=0.986742;RPB=0.523305;SGB=28.9929;VDB=0.758178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.5:7785358 chr05:007785358 0 W/7785358-7785358 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.619577;DP=3556;DP4=1477,1936,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92944e-10;MQSB=0.946379;RPB=0.830843;SGB=62.7569;VDB=0.581373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.5:7785359 chr05:007785359 0 W/7785359-7785359 FN3756-S SNP G -> T AC=1;AN=190;BQB=0.931786;DP=3562;DP4=1470,1925,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72903e-11;MQSB=0.923184;RPB=0.995961;SGB=50.3161;VDB=0.565733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.5:7785360 chr05:007785360 0 W/7785360-7785360 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.73057;DP=3570;DP4=1481,1944,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.26142e-11;MQSB=0.914127;RPB=0.937915;SGB=67.3108;VDB=0.471111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.5:7792965 chr05:007792965 0 W/7792965-7792965 FN3473-S SNP G -> A AC=1;AN=184;BQB=0.259054;DP=1968;DP4=1549,299,10,1;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00152439;MQB=0.00747709;MQSB=0.907587;RPB=0.806388;SGB=28.7043;VDB=0.672885;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.5:7799717 chr05:007799717 0 W/7799717-7799717 FN4271-S SNP T -> G AC=1;AN=170;BQB=0.988259;DP=2534;DP4=1224,1194,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.59066e-05;MQSB=0.912573;RPB=0.183567;SGB=30.1021;VDB=0.158094;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.5:7800024 chr05:007800024 0 W/7800024-7800024 FN4271-S SNP A -> T AC=1;AN=170;BQB=0.920113;DP=2409;DP4=1143,1145,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.87163e-08;MQSB=0.932012;RPB=0.571126;SGB=41.7633;VDB=0.424233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.5:7801730 chr05:007801730 0 W/7801730-7801730 FN3835-S SNP T -> A AC=2;AN=190;BQB=0.995101;DP=2522;DP4=1487,897,8,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.35829e-09;MQSB=0.862214;RPB=0.756225;SGB=58.2031;VDB=0.0522659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.5:7801731 chr05:007801731 0 W/7801731-7801731 FN3835-S SNP G -> T AC=2;AN=190;BQB=0.996771;DP=2497;DP4=1447,888,9,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.97203e-09;MQSB=0.75943;RPB=0.836083;SGB=39.6545;VDB=0.0293418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.5:7801732 chr05:007801732 0 W/7801732-7801732 FN3835-S SNP C -> A AC=2;AN=190;BQB=0.995204;DP=2491;DP4=1452,849,10,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.903e-09;MQSB=0.74384;RPB=0.704837;SGB=26.2136;VDB=0.151907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.5:7803842 chr05:007803842 0 W/7803842-7803842 FN2286 SNP T -> A AC=2;AN=192;BQB=0.671924;DP=4707;DP4=2015,2296,18,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.60028e-23;MQSB=0.212055;RPB=0.809357;SGB=44.8992;VDB=0.507994;EFF=INTRON(MODIFIER||||415|LOC_Os05g14010|protein_coding|CODING|LOC_Os05g14010.1|7|1) FN2286.SNP.5:7803843 chr05:007803843 0 W/7803843-7803843 FN2286 SNP G -> T AC=2;AN=192;BQB=0.403189;DP=4708;DP4=2104,2253,16,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.05747e-24;MQSB=0.287535;RPB=0.943876;SGB=40.2061;VDB=0.718379;EFF=INTRON(MODIFIER||||415|LOC_Os05g14010|protein_coding|CODING|LOC_Os05g14010.1|7|1) FN3998-S.SNP.5:7805007 chr05:007805007 0 W/7805007-7805007 FN3998-S SNP T -> C AC=1;AN=168;BQB=0.290147;DP=2804;DP4=1370,1273,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000238701;MQSB=0.780018;RPB=0.717922;SGB=-0.101747;VDB=0.686723;EFF=INTRON(MODIFIER||||415|LOC_Os05g14010|protein_coding|CODING|LOC_Os05g14010.1|6|1) FN2419.SNP.5:7811911 chr05:007811911 0 W/7811911-7811911 FN2419 SNP C -> T AC=1;AN=200;BQB=0.360964;DP=4929;DP4=2407,2226,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74562e-17;MQSB=0.990318;RPB=0.705084;SGB=60.747;VDB=0.595776;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.5:7815406 chr05:007815406 0 W/7815406-7815406 FN2081-S SNP T -> G AC=1;AN=168;BQB=0.712911;DP=3613;DP4=1969,1591,19,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.39653e-19;MQSB=0.960212;RPB=0.86459;SGB=73.2319;VDB=0.200456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.5:7815942 chr05:007815942 0 W/7815942-7815942 FN2141-S SNP G -> C AC=2;AN=168;BQB=0.0117179;DP=4000;DP4=1920,2010,19,34;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0;MQB=0.0802186;MQSB=0.931705;RPB=0.965008;SGB=-287.418;VDB=0.964314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.5:7820929 chr05:007820929 0 W/7820929-7820929 FN1385-S Single Base Substitution A-C INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2640-S.SNP.5:7827440 chr05:007827440 0 W/7827440-7827440 FN2640-S SNP G -> A AC=1;AN=200;BQB=0.638265;DP=4908;DP4=2543,2065,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06136e-09;MQSB=0.984205;RPB=0.991317;SGB=68.0801;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.5:7830271 chr05:007830271 0 W/7830271-7830271 FN1073-S Single Base Substitution A-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN696-S.SNP.5:7831420 chr05:007831420 0 W/7831420-7831420 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN771-S.SNP.5:7832967 chr05:007832967 0 W/7832967-7832967 FN771-S Single Base Substitution C-A INTERGENIC HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN4043-S.SNP.5:7849542 chr05:007849542 0 W/7849542-7849542 FN4043-S SNP T -> C AC=1;AN=168;BQB=0.739792;DP=2760;DP4=1444,1225,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.28065e-09;MQSB=0.981202;RPB=0.913672;SGB=87.6193;VDB=0.500829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:7857729 chr05:007857729 0 W/7857729-7857729 FN2572-S SNP T -> G AC=1;AN=198;BQB=0.87939;DP=4244;DP4=2096,1883,24,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.99474e-27;MQSB=0.985629;RPB=0.986039;SGB=47.6323;VDB=0.212156;EFF=INTRON(MODIFIER||||429|LOC_Os05g14060|protein_coding|CODING|LOC_Os05g14060.1|1|1) FN2572-S.SNP.5:7857732 chr05:007857732 0 W/7857732-7857732 FN2572-S SNP T -> G AC=1;AN=198;BQB=0.379051;DP=4247;DP4=2158,1866,23,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.87759e-27;MQSB=0.932554;RPB=0.996032;SGB=96.8175;VDB=0.387473;EFF=INTRON(MODIFIER||||429|LOC_Os05g14060|protein_coding|CODING|LOC_Os05g14060.1|1|1) FN1084-S.SNP.5:7861079 chr05:007861079 0 W/7861079-7861079 FN1084-S Single Base Substitution C-T INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1202-S.SNP.5:7861525 chr05:007861525 0 W/7861525-7861525 FN1202-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2274-S.SNP.5:7862297 chr05:007862297 0 W/7862297-7862297 FN2274-S SNP A -> T AC=2;AN=190;BQB=0.701575;DP=4188;DP4=1978,1785,20,40;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000238777;MQB=7.40802e-25;MQSB=1.5028e-05;RPB=0.608944;SGB=158.519;VDB=0.568529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.5:7862338 chr05:007862338 0 W/7862338-7862338 FN3915-S SNP G -> A AC=1;AN=158;BQB=0.98266;DP=2246;DP4=987,1154,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.59067e-06;MQSB=0.720302;RPB=0.436939;SGB=23.9652;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.5:7863982 chr05:007863982 0 W/7863982-7863982 FN1371-S Single Base Substitution A-T INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2091-S.SNP.5:7875984 chr05:007875984 0 W/7875984-7875984 FN2091-S SNP C -> T AC=1;AN=168;BQB=5.37699e-06;DP=3466;DP4=1824,1595,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.89447e-07;MQSB=0.796165;RPB=0.804173;SGB=-205.192;VDB=0.55113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V505I|880|LOC_Os05g14100|protein_coding|CODING|LOC_Os05g14100.1|2|1) FN776-S.SNP.5:7875985 chr05:007875985 0 W/7875985-7875985 FN776-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN4148-S.SNP.5:7876620 chr05:007876620 0 W/7876620-7876620 FN4148-S SNP C -> G AC=1;AN=170;BQB=0.768261;DP=2454;DP4=1277,1128,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.000407498;MQB=0.00233847;MQSB=0.987302;RPB=0.997455;SGB=34.5445;VDB=0.630032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Cta|V293L|880|LOC_Os05g14100|protein_coding|CODING|LOC_Os05g14100.1|2|1) FN897-S.SNP.5:7879630 chr05:007879630 0 W/7879630-7879630 FN897-S Single Base Substitution G-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3280-S.SNP.5:7881067 chr05:007881067 0 W/7881067-7881067 FN3280-S SNP C -> T AC=1;AN=184;BQB=0.987019;DP=2707;DP4=1115,1505,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.93791e-05;MQSB=0.974707;RPB=0.235781;SGB=53.2642;VDB=0.206282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.5:7884401 chr05:007884401 0 W/7884401-7884401 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.151587;DP=2662;DP4=1262,1361,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.1791e-06;MQSB=0.792456;RPB=0.905741;SGB=-130.056;VDB=0.993028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R456H|1723|LOC_Os05g14110|protein_coding|CODING|LOC_Os05g14110.1|2|1) FN3626-S.SNP.5:7886208 chr05:007886208 0 W/7886208-7886208 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.99232;DP=2835;DP4=1413,1319,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01874e-08;MQSB=0.973168;RPB=0.904046;SGB=36.1006;VDB=0.0870734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D976N|1723|LOC_Os05g14110|protein_coding|CODING|LOC_Os05g14110.1|3|1) FN3626-S.SNP.5:7886210 chr05:007886210 0 W/7886210-7886210 FN3626-S SNP T -> A AC=1;AN=190;BQB=0.993628;DP=2844;DP4=1418,1304,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52018e-10;MQSB=0.938556;RPB=0.997285;SGB=26.2136;VDB=0.299629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D976E|1723|LOC_Os05g14110|protein_coding|CODING|LOC_Os05g14110.1|3|1) FN2711-S.SNP.5:7889359 chr05:007889359 0 W/7889359-7889359 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.598138;DP=4884;DP4=2281,2347,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02683e-10;MQSB=0.970741;RPB=0.996503;SGB=51.0851;VDB=0.535571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.5:7892642 chr05:007892642 0 W/7892642-7892642 FN1309-S Single Base Substitution G-A INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN483-S.SNP.5:7893962 chr05:007893962 0 W/7893962-7893962 FN483-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g14130 ZOS5-05 - C2H2 zinc finger protein, expressed SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3740-S.SNP.5:7894893 chr05:007894893 0 W/7894893-7894893 FN3740-S SNP G -> A AC=1;AN=190;BQB=0.996796;DP=2698;DP4=1335,1278,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.50755e-10;MQSB=0.999757;RPB=0.714113;SGB=28.7675;VDB=0.251713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.5:7904206 chr05:007904206 0 W/7904206-7904206 FN2329 SNP T -> C AC=1;AN=192;BQB=0.998476;DP=4393;DP4=2050,2086,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.17014e-10;MQSB=0.983036;RPB=0.292379;SGB=50.4731;VDB=0.93697;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.5:7906012 chr05:007906012 0 W/7906012-7906012 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN421-S.SNP.5:7913838 chr05:007913838 0 W/7913838-7913838 FN421-S Single Base Substitution C-T INTRON HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2692-S.SNP.5:7914961 chr05:007914961 0 W/7914961-7914961 FN2692-S SNP G -> A AC=2;AN=200;BQB=0.86995;DP=5089;DP4=2604,2243,34,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.64582e-33;MQSB=0.641108;RPB=0.88849;SGB=191.687;VDB=0.808576;EFF=INTRON(MODIFIER||||414|LOC_Os05g14160|protein_coding|CODING|LOC_Os05g14160.1|6|1) FN1596-S.SNP.5:7915116 chr05:007915116 0 W/7915116-7915116 FN1596-S Single Base Substitution C-T INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1565-S.SNP.5:7922188 chr05:007922188 0 W/7922188-7922188 FN1565-S Single Base Substitution T-C INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1065-S.SNP.5:7927721 chr05:007927721 0 W/7927721-7927721 FN1065-S Single Base Substitution C-T INTRON HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2572-S.SNP.5:7930264 chr05:007930264 0 W/7930264-7930264 FN2572-S SNP T -> C AC=1;AN=198;BQB=0.895746;DP=4132;DP4=1888,1993,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.96211e-10;MQSB=0.985267;RPB=0.536302;SGB=47.3393;VDB=0.978791;EFF=INTRON(MODIFIER||||989|LOC_Os05g14170|protein_coding|CODING|LOC_Os05g14170.1|3|1) FN-261.SNP.5:7935245 chr05:007935245 0 W/7935245-7935245 FN-261 Single Base Substitution A-T INTRON HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN2207-S.SNP.5:7939765 chr05:007939765 0 W/7939765-7939765 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.976382;DP=4864;DP4=2384,2090,16,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.18911e-17;MQSB=0.751548;RPB=0.651729;SGB=-110.775;VDB=0.303356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.5:7939766 chr05:007939766 0 W/7939766-7939766 FN2207-S SNP G -> T AC=1;AN=190;BQB=0.667888;DP=4850;DP4=2376,2075,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28101e-14;MQSB=0.957992;RPB=0.991133;SGB=46.6446;VDB=0.173372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.5:7939767 chr05:007939767 0 W/7939767-7939767 FN2207-S SNP A -> G AC=1;AN=190;BQB=0.93424;DP=4844;DP4=2422,2032,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.28647e-14;MQSB=0.581852;RPB=0.999659;SGB=71.6393;VDB=0.512361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.5:7943183 chr05:007943183 0 W/7943183-7943183 FN2335 SNP G -> T AC=1;AN=192;BQB=0.519067;DP=5176;DP4=2380,2147,14,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.01122e-23;MQSB=0.91193;RPB=0.841296;SGB=-44.0408;VDB=0.678092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.5:7943184 chr05:007943184 0 W/7943184-7943184 FN2335 SNP G -> T AC=1;AN=192;BQB=0.988381;DP=5167;DP4=2421,2183,16,26;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.12845e-22;MQSB=0.903126;RPB=0.997756;SGB=-326.009;VDB=0.561338;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.5:7943411 chr05:007943411 0 W/7943411-7943411 FN4149-S SNP A -> T AC=2;AN=170;BQB=0.176174;DP=1373;DP4=764,561,9,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.61205e-09;MQSB=0.973789;RPB=0.36947;SGB=38.3207;VDB=0.0187114;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.5:7943412 chr05:007943412 0 W/7943412-7943412 FN4149-S SNP A -> T AC=2;AN=170;BQB=0.715005;DP=1368;DP4=751,547,8,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.90844e-08;MQSB=0.986616;RPB=0.151699;SGB=38.3207;VDB=0.0032922;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.5:7943413 chr05:007943413 0 W/7943413-7943413 FN4149-S SNP C -> T AC=2;AN=170;BQB=0.536415;DP=1373;DP4=767,559,9,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.26103e-08;MQSB=0.968699;RPB=0.165848;SGB=34.878;VDB=0.000908951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.5:7943432 chr05:007943432 0 W/7943432-7943432 FN2301 SNP T -> A AC=1;AN=192;BQB=0.299385;DP=5255;DP4=2388,2481,3,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68614e-05;MQSB=0.998684;RPB=0.415543;SGB=30.9536;VDB=0.195133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.5:7943866 chr05:007943866 0 W/7943866-7943866 FN-377 Single Base Substitution G-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN3905-S.SNP.5:7943944 chr05:007943944 0 W/7943944-7943944 FN3905-S SNP A -> T AC=1;AN=158;BQB=0.988725;DP=2698;DP4=1187,1409,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.5949e-07;MQSB=0.985761;RPB=0.246672;SGB=34.0735;VDB=0.146427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.5:7945916 chr05:007945916 0 W/7945916-7945916 FN2381 SNP G -> A AC=1;AN=192;BQB=0.98901;DP=4406;DP4=1838,2203,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.44578e-08;MQSB=0.51353;RPB=0.903409;SGB=31.4783;VDB=0.650456;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.5:7948010 chr05:007948010 0 W/7948010-7948010 FN-346 Single Base Substitution A-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3382-S.SNP.5:7954215 chr05:007954215 0 W/7954215-7954215 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.779346;DP=2853;DP4=1401,1342,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.59994e-11;MQSB=0.999812;RPB=0.650101;SGB=63.9222;VDB=0.180413;EFF=UTR_3_PRIME(MODIFIER||1781||235|LOC_Os05g14180|protein_coding|CODING|LOC_Os05g14180.2|4|1),UTR_3_PRIME(MODIFIER||211||257|LOC_Os05g14180|protein_coding|CODING|LOC_Os05g14180.1|5|1) FN2673-S.SNP.5:7956566 chr05:007956566 0 W/7956566-7956566 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.288316;DP=4688;DP4=2563,1958,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09886e-09;MQSB=0.952871;RPB=0.909229;SGB=43.8747;VDB=0.931939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1367-S.SNP.5:7967286 chr05:007967286 0 W/7967286-7967286 FN1367-S Single Base Substitution T-A INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1444-S.SNP.5:7975444 chr05:007975444 0 W/7975444-7975444 FN1444-S Single Base Substitution C-T INTRON HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3808-S.SNP.5:7976879 chr05:007976879 0 W/7976879-7976879 FN3808-S SNP G -> C AC=1;AN=190;BQB=0.932221;DP=2393;DP4=1078,1245,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4454e-05;MQSB=0.967194;RPB=0.78004;SGB=30.8803;VDB=0.385012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.5:7981388 chr05:007981388 0 W/7981388-7981388 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.590823;DP=1677;DP4=1197,400,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000340729;MQSB=0.899959;RPB=0.729096;SGB=-2.17824;VDB=0.153067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.5:7981514 chr05:007981514 0 W/7981514-7981514 FN2584-S SNP A -> C AC=1;AN=198;BQB=0.988028;DP=3532;DP4=1624,1615,18,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.4751e-14;MQSB=0.000370078;RPB=0.744463;SGB=33.2762;VDB=0.798626;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.5:7990544 chr05:007990544 0 W/7990544-7990544 FN502-S Single Base Substitution C-T INTERGENIC HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN-131.SNP.5:7999384 chr05:007999384 0 W/7999384-7999384 FN-131 Single Base Substitution G-A INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2136-S.SNP.5:8008017 chr05:008008017 0 W/8008017-8008017 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.498873;DP=2928;DP4=1209,1667,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0355191;MQB=0.781058;MQSB=1.89265e-38;RPB=0.96273;SGB=24.6155;VDB=0.5843;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.5:8010345 chr05:008010345 0 W/8010345-8010345 FN1356-S Single Base Substitution T-A INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1332-S.SNP.5:8010474 chr05:008010474 0 W/8010474-8010474 FN1332-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN768-S.SNP.5:8010780 chr05:008010780 0 W/8010780-8010780 FN768-S Single Base Substitution T-C INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN552-S.SNP.5:8010857 chr05:008010857 0 W/8010857-8010857 FN552-S Single Base Substitution G-T INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN3696-S.SNP.5:8011276 chr05:008011276 0 W/8011276-8011276 FN3696-S SNP C -> A AC=1;AN=190;BQB=0.974734;DP=2544;DP4=1115,1345,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.23092e-08;MQSB=0.947202;RPB=0.470918;SGB=32.5467;VDB=0.242177;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.5:8011281 chr05:008011281 0 W/8011281-8011281 W674-4-1 Single Base Substitution C-G INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN1546-S.SNP.5:8012170 chr05:008012170 0 W/8012170-8012170 FN1546-S Single Base Substitution C-T INTERGENIC Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN3382-S.SNP.5:8012709 chr05:008012709 0 W/8012709-8012709 FN3382-S SNP G -> A AC=1;AN=184;BQB=0.248007;DP=3620;DP4=1666,1831,14,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04028e-13;MQSB=0.998643;RPB=0.66578;SGB=25.0638;VDB=0.611022;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.5:8018677 chr05:008018677 0 W/8018677-8018677 FN678-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g14280 RNA-directed DNA polymerase, putative, expressed SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN-329.SNP.5:8020138 chr05:008020138 0 W/8020138-8020138 FN-329 Single Base Substitution A-T INTRON HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3695-S.SNP.5:8020633 chr05:008020633 0 W/8020633-8020633 FN3695-S SNP C -> A AC=2;AN=190;BQB=0.323006;DP=2502;DP4=1146,1269,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.9177e-11;MQSB=0.959614;RPB=0.891105;SGB=112.85;VDB=0.664716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C25F|383|LOC_Os05g14280|protein_coding|CODING|LOC_Os05g14280.1|1|1) FN1627-S.SNP.5:8024261 chr05:008024261 0 W/8024261-8024261 FN1627-S Single Base Substitution C-A INTERGENIC Homo SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN1627-S.SNP.5:8024262 chr05:008024262 0 W/8024262-8024262 FN1627-S Single Base Substitution T-A INTERGENIC Homo SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN943-S.SNP.5:8026659 chr05:008026659 0 W/8026659-8026659 FN943-S Single Base Substitution G-C INTERGENIC HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN943-S.SNP.5:8026660 chr05:008026660 0 W/8026660-8026660 FN943-S Single Base Substitution C-A INTERGENIC HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN2308.SNP.5:8028565 chr05:008028565 0 W/8028565-8028565 FN2308 SNP C -> T AC=1;AN=192;BQB=0.46366;DP=3812;DP4=1896,1632,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=0.0206177;MQSB=0.0153861;RPB=0.923763;SGB=21.9585;VDB=0.836981;EFF=INTRON(MODIFIER||||218|LOC_Os05g14290|protein_coding|CODING|LOC_Os05g14290.1|1|1) FN1029-S.SNP.5:8036050 chr05:008036050 0 W/8036050-8036050 FN1029-S Single Base Substitution G-T INTRON HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3525-S.SNP.5:8038920 chr05:008038920 0 W/8038920-8038920 FN3525-S SNP G -> A AC=2;AN=188;BQB=0.649596;DP=2654;DP4=1271,1325,11,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.81963e-08;MQSB=0.961784;RPB=0.446704;SGB=46.6141;VDB=0.308342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S407N|467|LOC_Os05g14300|protein_coding|CODING|LOC_Os05g14300.1|7|1) FN2472.SNP.5:8047640 chr05:008047640 0 W/8047640-8047640 FN2472 SNP T -> C AC=2;AN=200;BQB=0.6778;DP=4848;DP4=2374,2201,23,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56589e-31;MQSB=0.971179;RPB=0.964487;SGB=184.476;VDB=0.755168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.5:8047646 chr05:008047646 0 W/8047646-8047646 FN2472 SNP T -> A AC=2;AN=200;BQB=0.720886;DP=4836;DP4=2315,2159,21,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.60256e-31;MQSB=0.965113;RPB=0.954855;SGB=184.476;VDB=0.697382;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.5:8051638 chr05:008051638 0 W/8051638-8051638 FN760-S Single Base Substitution A-T INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN803-S.SNP.5:8057842 chr05:008057842 0 W/8057842-8057842 FN803-S Single Base Substitution C-T INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2373.SNP.5:8059539 chr05:008059539 0 W/8059539-8059539 FN2373 SNP A -> T AC=2;AN=192;BQB=0.00205294;DP=4151;DP4=2178,1681,25,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.23762e-20;MQSB=0.99014;RPB=0.732605;SGB=40.2061;VDB=0.897898;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D44V|915|LOC_Os05g14330|protein_coding|CODING|LOC_Os05g14330.1|1|1) FN891-S.SNP.5:8074271 chr05:008074271 0 W/8074271-8074271 FN891-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g14350 retrotransposon protein, putative, unclassified, expressed SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2324.SNP.5:8084122 chr05:008084122 0 W/8084122-8084122 FN2324 SNP G -> T AC=1;AN=192;BQB=0.727014;DP=4760;DP4=2223,2231,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.51989e-14;MQSB=0.998588;RPB=0.978307;SGB=93.2452;VDB=0.975889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.5:8084806 chr05:008084806 0 W/8084806-8084806 FN1304-S Single Base Substitution T-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN3395-S.SNP.5:8097485 chr05:008097485 0 W/8097485-8097485 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.943523;DP=3110;DP4=1720,1303,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70995e-12;MQSB=0.895144;RPB=0.958314;SGB=40.9276;VDB=0.619782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.5:8103257 chr05:008103257 0 W/8103257-8103257 FN2637-S SNP C -> A AC=1;AN=200;BQB=0.900986;DP=4835;DP4=2241,2392,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97577e-09;MQSB=0.0134815;RPB=0.809577;SGB=12.7003;VDB=0.293058;EFF=INTRON(MODIFIER||||571|LOC_Os05g14380|protein_coding|CODING|LOC_Os05g14380.1|2|1) FN-399.SNP.5:8103930 chr05:008103930 0 W/8103930-8103930 FN-399 Single Base Substitution G-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN471-S.SNP.5:8104789 chr05:008104789 0 W/8104789-8104789 FN471-S Single Base Substitution A-T INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3661-S.SNP.5:8112242 chr05:008112242 0 W/8112242-8112242 FN3661-S SNP G -> T AC=1;AN=190;BQB=0.995177;DP=3353;DP4=1484,1723,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0193856;MQB=0.0254024;MQSB=5.84468e-09;RPB=0.667189;SGB=13.4442;VDB=0.777744;EFF=INTRON(MODIFIER||||1050|LOC_Os05g14400|protein_coding|CODING|LOC_Os05g14400.1|6|1) FN1496-S.SNP.5:8112906 chr05:008112906 0 W/8112906-8112906 FN1496-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1496-S.SNP.5:8112907 chr05:008112907 0 W/8112907-8112907 FN1496-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g14400 retrotransposon protein, putative, unclassified, expressed SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN786-S.SNP.5:8117495 chr05:008117495 0 W/8117495-8117495 FN786-S Single Base Substitution C-A INTRON HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2538-S.SNP.5:8119905 chr05:008119905 0 W/8119905-8119905 FN2538-S SNP C -> G AC=1;AN=198;BQB=0.279687;DP=4291;DP4=2353,1719,18,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.29607e-10;MQSB=0.846412;RPB=0.110822;SGB=-37.8551;VDB=0.831483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.5:8120929 chr05:008120929 0 W/8120929-8120929 FN3833-S SNP T -> C AC=2;AN=190;BQB=0.516692;DP=1576;DP4=438,1056,3,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.18813e-08;MQSB=0.861984;RPB=0.456602;SGB=85.5263;VDB=0.27151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.5:8121865 chr05:008121865 0 W/8121865-8121865 FN1650-S Single Base Substitution C-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1650-S.SNP.5:8121867 chr05:008121867 0 W/8121867-8121867 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN-228.SNP.5:8124108 chr05:008124108 0 W/8124108-8124108 FN-228 Single Base Substitution G-A INTRON HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1085-S.SNP.5:8128413 chr05:008128413 0 W/8128413-8128413 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3540-S.SNP.5:8129612 chr05:008129612 0 W/8129612-8129612 FN3540-S SNP C -> T AC=2;AN=188;BQB=0.714858;DP=2807;DP4=1350,1375,22,21;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00213751;MQB=1.4566e-07;MQSB=0.736407;RPB=0.705649;SGB=189.821;VDB=0.547712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R612Q|818|LOC_Os05g14420|protein_coding|CODING|LOC_Os05g14420.1|5|1) W472-5-1.SNP.5:8133880 chr05:008133880 0 W/8133880-8133880 W472-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN1355-S.SNP.5:8136782 chr05:008136782 0 W/8136782-8136782 FN1355-S Single Base Substitution T-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1355-S.SNP.5:8136783 chr05:008136783 0 W/8136783-8136783 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN950-S.SNP.5:8138703 chr05:008138703 0 W/8138703-8138703 FN950-S Single Base Substitution C-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN788-S.SNP.5:8142875 chr05:008142875 0 W/8142875-8142875 FN788-S Single Base Substitution C-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1261-S.SNP.5:8143238 chr05:008143238 0 W/8143238-8143238 FN1261-S Single Base Substitution G-A INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1290-S.SNP.5:8143987 chr05:008143987 0 W/8143987-8143987 FN1290-S Single Base Substitution G-T INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN2284.SNP.5:8145897 chr05:008145897 0 W/8145897-8145897 FN2284 SNP A -> C AC=1;AN=192;BQB=0.784746;DP=4995;DP4=2300,2415,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0026026;MQB=6.50602e-12;MQSB=0.977857;RPB=0.256146;SGB=64.7304;VDB=0.627533;EFF=INTRON(MODIFIER||||751|LOC_Os05g14440|protein_coding|CODING|LOC_Os05g14440.1|1|1) FN-315.SNP.5:8147325 chr05:008147325 0 W/8147325-8147325 FN-315 Single Base Substitution T-A INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1202-S.SNP.5:8147492 chr05:008147492 0 W/8147492-8147492 FN1202-S Single Base Substitution C-A INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3939-S.SNP.5:8155459 chr05:008155459 0 W/8155459-8155459 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.763058;DP=2192;DP4=817,1249,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000184021;MQSB=0.998919;RPB=0.545869;SGB=7.23273;VDB=0.246704;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.5:8155613 chr05:008155613 0 W/8155613-8155613 FN1179-S Single Base Substitution C-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1179-S.SNP.5:8155614 chr05:008155614 0 W/8155614-8155614 FN1179-S Single Base Substitution T-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3696-S.SNP.5:8159459 chr05:008159459 0 W/8159459-8159459 FN3696-S SNP T -> A AC=2;AN=190;BQB=0.94339;DP=2217;DP4=903,1242,7,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.79928e-12;MQSB=0.715876;RPB=0.22554;SGB=85.5263;VDB=0.128712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.5:8159933 chr05:008159933 0 W/8159933-8159933 FN2667-S SNP T -> C AC=2;AN=200;BQB=0.631265;DP=3527;DP4=1707,1591,20,15;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0754182;MQB=0.448303;MQSB=5.74495e-31;RPB=0.909056;SGB=36.7778;VDB=0.290524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.5:8172625 chr05:008172625 0 W/8172625-8172625 FN1351-S Single Base Substitution T-C INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN421-S.SNP.5:8173000 chr05:008173000 0 W/8173000-8173000 FN421-S Single Base Substitution C-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2611-S.SNP.5:8174607 chr05:008174607 0 W/8174607-8174607 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.872976;DP=5071;DP4=2308,2539,10,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0001972;MQB=1.50196e-21;MQSB=0.87849;RPB=0.927425;SGB=73.7728;VDB=0.0250322;EFF=INTRON(MODIFIER||||123|LOC_Os05g14470|protein_coding|CODING|LOC_Os05g14470.1|2|1) W591-4-1.SNP.5:8177928 chr05:008177928 0 W/8177928-8177928 W591-4-1 Single Base Substitution G-A INTRON HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1724-S.SNP.5:8180116 chr05:008180116 0 W/8180116-8180116 FN1724-S SNP C -> G AC=1;AN=188;BQB=0.353405;DP=3401;DP4=1750,1529,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.25691e-09;MQSB=0.969424;RPB=0.529185;SGB=-117.892;VDB=0.914786;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.5:8189987 chr05:008189987 0 W/8189987-8189987 FN979-S Single Base Substitution C-T INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3937-S.SNP.5:8194430 chr05:008194430 0 W/8194430-8194430 FN3937-S SNP A -> G AC=1;AN=158;BQB=0.96132;DP=3131;DP4=1398,1644,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.130629;MQB=0.298598;MQSB=0.361027;RPB=0.246994;SGB=47.5512;VDB=0.251074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.5:8203075 chr05:008203075 0 W/8203075-8203075 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.989621;DP=2189;DP4=1080,1038,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00365464;MQB=0.00201784;MQSB=0.779426;RPB=0.880772;SGB=16.7104;VDB=0.344457;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.5:8210743 chr05:008210743 0 W/8210743-8210743 FN2461 SNP G -> T AC=2;AN=200;BQB=0.984576;DP=4473;DP4=1979,2198,10,19;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00424771;MQB=0.00345837;MQSB=0.000685913;RPB=0.970728;SGB=60.747;VDB=0.419205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G1463V|1898|LOC_Os05g14510|protein_coding|CODING|LOC_Os05g14510.1|8|1) FN718-S.SNP.5:8211840 chr05:008211840 0 W/8211840-8211840 FN718-S Single Base Substitution T-A INTRON HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN806-S.SNP.5:8225646 chr05:008225646 0 W/8225646-8225646 FN806-S Single Base Substitution C-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN500-S.SNP.5:8226363 chr05:008226363 0 W/8226363-8226363 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2704-S.SNP.5:8228097 chr05:008228097 0 W/8228097-8228097 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.847052;DP=4679;DP4=2442,1988,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.45435e-13;MQSB=0.381478;RPB=0.0738069;SGB=91.1059;VDB=0.0125743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.5:8235467 chr05:008235467 0 W/8235467-8235467 FN2401 SNP T -> G AC=1;AN=200;BQB=0.952605;DP=4943;DP4=2345,2290,8,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000404613;MQB=1.26049e-07;MQSB=0.00489012;RPB=0.0621589;SGB=72.6852;VDB=0.401376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:8238174 chr05:008238174 0 W/8238174-8238174 FN2247-S SNP T -> C AC=1;AN=190;BQB=0.928196;DP=4368;DP4=2070,2028,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46196e-09;MQSB=0.702282;RPB=0.996341;SGB=67.3108;VDB=0.619247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.5:8239122 chr05:008239122 0 W/8239122-8239122 FN1038-S Single Base Substitution G-A INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN941-S.SNP.5:8241039 chr05:008241039 0 W/8241039-8241039 FN941-S Single Base Substitution C-T INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2671-S.SNP.5:8244555 chr05:008244555 0 W/8244555-8244555 FN2671-S SNP G -> A AC=2;AN=200;BQB=0.853477;DP=4859;DP4=2244,2356,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.54607e-16;MQSB=0.950047;RPB=0.76052;SGB=94.3471;VDB=0.446818;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.5:8247051 chr05:008247051 0 W/8247051-8247051 W423-5-1 Single Base Substitution T-A INTRON HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN3377-S.SNP.5:8250434 chr05:008250434 0 W/8250434-8250434 FN3377-S SNP C -> T AC=1;AN=184;BQB=0.961295;DP=2866;DP4=1290,1479,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.50997e-06;MQSB=0.980752;RPB=0.367974;SGB=35.1773;VDB=0.443437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.5:8256138 chr05:008256138 0 W/8256138-8256138 FN2626-S SNP G -> T AC=1;AN=200;BQB=0.655286;DP=5496;DP4=2797,2363,1,5;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.29294;MQB=0.351051;MQSB=0;RPB=0.169815;SGB=22.0312;VDB=0.0732611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.5:8266222 chr05:008266222 0 W/8266222-8266222 FN2328 SNP T -> A AC=1;AN=192;BQB=0.582759;DP=4983;DP4=2011,2527,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91408e-18;MQSB=0.975981;RPB=0.173752;SGB=100.374;VDB=0.42276;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.5:8272073 chr05:008272073 0 W/8272073-8272073 FN4043-S SNP T -> C AC=1;AN=168;BQB=0.815893;DP=2444;DP4=1006,1369,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.01025e-12;MQSB=0.750473;RPB=0.959684;SGB=62.1945;VDB=0.830961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.5:8273001 chr05:008273001 0 W/8273001-8273001 FN1614-S Single Base Substitution T-C INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3509-S.SNP.5:8278192 chr05:008278192 0 W/8278192-8278192 FN3509-S SNP A -> G AC=2;AN=188;BQB=0.910198;DP=2527;DP4=1038,1411,8,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.34889e-11;MQSB=0.999962;RPB=0.643523;SGB=71.4172;VDB=0.813123;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.5:8284673 chr05:008284673 0 W/8284673-8284673 FN-107 Single Base Substitution C-A INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN754-S.SNP.5:8290536 chr05:008290536 0 W/8290536-8290536 FN754-S Single Base Substitution G-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1014-S.SNP.5:8291094 chr05:008291094 0 W/8291094-8291094 FN1014-S Single Base Substitution A-G INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN-179.SNP.5:8295489 chr05:008295489 0 W/8295489-8295489 FN-179 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g14560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3377-S.SNP.5:8298303 chr05:008298303 0 W/8298303-8298303 FN3377-S SNP T -> A AC=1;AN=184;BQB=0.999914;DP=3040;DP4=1679,1154,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0161184;MQB=0.0756099;MQSB=5.01499e-23;RPB=0.987919;SGB=25.1826;VDB=0.895256;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.5:8299214 chr05:008299214 0 W/8299214-8299214 FN1652-S Single Base Substitution A-T INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN1742-S.SNP.5:8299214 chr05:008299214 0 W/8299214-8299214 FN1742-S SNP A -> T AC=1;AN=188;BQB=0.551097;DP=2485;DP4=1283,1169,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.83296e-07;MQSB=0.816407;RPB=0.142846;SGB=5.5382;VDB=0.580763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.5:8301792 chr05:008301792 0 W/8301792-8301792 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.00381261;DP=4055;DP4=2002,2019,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.36788e-06;MQSB=0.974295;RPB=0.965453;SGB=-85.2162;VDB=0.995398;EFF=INTRON(MODIFIER||||155|LOC_Os05g14570|protein_coding|CODING|LOC_Os05g14570.1|2|1) FN1380-S.SNP.5:8308517 chr05:008308517 0 W/8308517-8308517 FN1380-S Single Base Substitution G-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2362.SNP.5:8310536 chr05:008310536 0 W/8310536-8310536 FN2362 SNP C -> T AC=1;AN=192;BQB=0.914935;DP=4285;DP4=2083,1990,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.49e-12;MQSB=0.558827;RPB=0.652058;SGB=15.1765;VDB=0.286154;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.5:8312171 chr05:008312171 0 W/8312171-8312171 W246-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1060-S.SNP.5:8320712 chr05:008320712 0 W/8320712-8320712 FN1060-S Single Base Substitution C-T INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. W443-5-1-3.SNP.5:8325892 chr05:008325892 0 W/8325892-8325892 W443-5-1-3 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. W443-5-1-3.SNP.5:8325893 chr05:008325893 0 W/8325893-8325893 W443-5-1-3 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os05g14610 retrotransposon protein, putative, unclassified, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. W443-5-1-3.SNP.5:8325894 chr05:008325894 0 W/8325894-8325894 W443-5-1-3 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g14610 retrotransposon protein, putative, unclassified, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN4230-S.SNP.5:8326154 chr05:008326154 0 W/8326154-8326154 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.972121;DP=2386;DP4=1273,1042,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.55723e-10;MQSB=0.885068;RPB=0.459265;SGB=74.528;VDB=0.398319;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A446T|865|LOC_Os05g14610|protein_coding|CODING|LOC_Os05g14610.1|4|1) FN3897-S.SNP.5:8327082 chr05:008327082 0 W/8327082-8327082 FN3897-S SNP G -> A AC=2;AN=158;BQB=0.774418;DP=3231;DP4=1492,1610,23,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.72445e-22;MQSB=0.766834;RPB=0.815219;SGB=195.628;VDB=0.356276;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W667*|865|LOC_Os05g14610|protein_coding|CODING|LOC_Os05g14610.1|7|1);LOF=(LOC_Os05g14610|LOC_Os05g14610|1|1.00);NMD=(LOC_Os05g14610|LOC_Os05g14610|1|1.00) FN3890-S.SNP.5:8328034 chr05:008328034 0 W/8328034-8328034 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.981477;DP=2800;DP4=1199,1411,31,36;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.33019e-32;MQSB=0.710856;RPB=0.951565;SGB=282.027;VDB=0.907391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.5:8328982 chr05:008328982 0 W/8328982-8328982 FN1075-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g14620 retrotransposon protein, putative, unclassified SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN-364.SNP.5:8331405 chr05:008331405 0 W/8331405-8331405 FN-364 Single Base Substitution T-A INTERGENIC HOMO SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN-364.SNP.5:8331406 chr05:008331406 0 W/8331406-8331406 FN-364 Single Base Substitution T-A INTERGENIC HOMO SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3442-S.SNP.5:8331897 chr05:008331897 0 W/8331897-8331897 FN3442-S SNP T -> A AC=1;AN=184;BQB=0.723583;DP=2937;DP4=1389,1464,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0187266;MQB=8.42242e-05;MQSB=0.838573;RPB=0.318419;SGB=8.14452;VDB=0.0224906;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.5:8332578 chr05:008332578 0 W/8332578-8332578 FN1484-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g14640 retrotransposon protein, putative, unclassified, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1484-S.SNP.5:8332579 chr05:008332579 0 W/8332579-8332579 FN1484-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN3421-S.SNP.5:8336797 chr05:008336797 0 W/8336797-8336797 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.953629;DP=2805;DP4=1577,1137,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0573975;MQB=0.271359;MQSB=0.000611267;RPB=0.394357;SGB=18.1394;VDB=0.387294;EFF=INTRON(MODIFIER||||273|LOC_Os05g14650|protein_coding|CODING|LOC_Os05g14650.1|1|1) FN-257.SNP.5:8342190 chr05:008342190 0 W/8342190-8342190 FN-257 Single Base Substitution C-A INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3364-S.SNP.5:8345233 chr05:008345233 0 W/8345233-8345233 FN3364-S SNP T -> C AC=1;AN=184;BQB=0.844478;DP=3239;DP4=1691,1406,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42069e-06;MQSB=0.547402;RPB=0.885924;SGB=32.2261;VDB=0.322705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.5:8353111 chr05:008353111 0 W/8353111-8353111 FN1453-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN893-S.SNP.5:8353133 chr05:008353133 0 W/8353133-8353133 FN893-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g14690 retrotransposon protein, putative, unclassified, expressed SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. W423-5-1.SNP.5:8354855 chr05:008354855 0 W/8354855-8354855 W423-5-1 Single Base Substitution C-G INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2437.SNP.5:8359780 chr05:008359780 0 W/8359780-8359780 FN2437 SNP G -> T AC=2;AN=200;BQB=0.326994;DP=5118;DP4=2632,2162,32,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.95913e-36;MQSB=0.928025;RPB=0.976;SGB=159.743;VDB=0.813475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.5:8360411 chr05:008360411 0 W/8360411-8360411 FN3463-S SNP T -> C AC=1;AN=184;BQB=0.997613;DP=3130;DP4=1524,1507,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.57658e-07;MQSB=0.961204;RPB=0.793136;SGB=48.7425;VDB=0.87424;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.5:8362162 chr05:008362162 0 W/8362162-8362162 FN901-S Single Base Substitution T-C INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3809-S.SNP.5:8369389 chr05:008369389 0 W/8369389-8369389 FN3809-S SNP G -> A AC=1;AN=190;BQB=0.979858;DP=2508;DP4=1241,1183,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49199e-05;MQSB=0.997935;RPB=0.973734;SGB=30.8803;VDB=0.405689;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A248|356|LOC_Os05g14730|protein_coding|CODING|LOC_Os05g14730.1|9|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A242|350|LOC_Os05g14730|protein_coding|CODING|LOC_Os05g14730.2|9|1) FN2677-S.SNP.5:8384647 chr05:008384647 0 W/8384647-8384647 FN2677-S SNP T -> C AC=1;AN=200;BQB=0.882049;DP=4738;DP4=2262,2268,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.88136e-08;MQSB=0.995877;RPB=0.67791;SGB=21.6694;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.5:8386245 chr05:008386245 0 W/8386245-8386245 FN1450-S Single Base Substitution G-T INTERGENIC Homo SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3924-S.SNP.5:8402099 chr05:008402099 0 W/8402099-8402099 FN3924-S SNP G -> C AC=2;AN=158;BQB=0.849636;DP=2305;DP4=1127,1069,16,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.66587e-17;MQSB=0.939743;RPB=0.102801;SGB=61.7299;VDB=0.0679317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.5:8403181 chr05:008403181 0 W/8403181-8403181 FN3360-S SNP T -> C AC=1;AN=184;BQB=0.925219;DP=3168;DP4=1517,1533,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52417e-08;MQSB=0.999945;RPB=0.116443;SGB=53.2642;VDB=0.146427;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.5:8405741 chr05:008405741 0 W/8405741-8405741 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.623657;DP=3075;DP4=1428,1539,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00878049;MQB=1.03226e-05;MQSB=8.88149e-08;RPB=0.186155;SGB=52.3148;VDB=0.0487084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.5:8407044 chr05:008407044 0 W/8407044-8407044 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.976694;DP=6331;DP4=2750,3248,12,12;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0609698;MQB=0.416836;MQSB=0;RPB=0.606539;SGB=47.7211;VDB=0.060122;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.5:8408972 chr05:008408972 0 W/8408972-8408972 FN1684-S SNP G -> T AC=1;AN=188;BQB=0.0014653;DP=3621;DP4=1858,1719,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.90969e-08;MQSB=0.922145;RPB=0.104341;SGB=-103.637;VDB=0.865717;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|8|1) FN1684-S.SNP.5:8408973 chr05:008408973 0 W/8408973-8408973 FN1684-S SNP A -> T AC=1;AN=188;BQB=0.00535986;DP=3608;DP4=1854,1712,19,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.54631e-07;MQSB=0.914834;RPB=0.253669;SGB=-249.159;VDB=0.836586;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|8|1) FN2295.SNP.5:8413203 chr05:008413203 0 W/8413203-8413203 FN2295 SNP G -> C AC=2;AN=192;BQB=0.975228;DP=4891;DP4=2473,2100,34,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.52452e-32;MQSB=0.830452;RPB=0.863593;SGB=-195.793;VDB=0.549424;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|3|1) FN1321-S.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN1321-S Single Base Substitution C-T INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2377.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN2377 SNP C -> T AC=2;AN=192;BQB=0.990412;DP=4755;DP4=2176,2267,36,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.66901e-37;MQSB=0.966497;RPB=0.995019;SGB=162.26;VDB=0.406458;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|3|1) FN3374-S.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN3374-S SNP C -> T AC=2;AN=184;BQB=0.932528;DP=2946;DP4=1416,1371,31,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.68204e-32;MQSB=0.975662;RPB=0.614256;SGB=173.662;VDB=0.0270841;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|3|1) FN3748-S.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN3748-S SNP C -> T AC=1;AN=190;BQB=0.999361;DP=2995;DP4=1403,1465,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33299e-08;MQSB=0.947742;RPB=0.895988;SGB=62.7569;VDB=0.616449;EFF=INTRON(MODIFIER||||331|LOC_Os05g14800|protein_coding|CODING|LOC_Os05g14800.1|3|1) FN765-S.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN765-S Single Base Substitution C-T INTRON HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN851-S.SNP.5:8414287 chr05:008414287 0 W/8414287-8414287 FN851-S Single Base Substitution C-T INTRON HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2447.SNP.5:8418318 chr05:008418318 0 W/8418318-8418318 FN2447 SNP T -> C AC=1;AN=200;BQB=0.475195;DP=4566;DP4=2334,1980,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021901;MQB=8.49796e-08;MQSB=0.85565;RPB=0.335722;SGB=3.06925;VDB=0.768163;EFF=SPLICE_SITE_REGION(LOW||||353|LOC_Os05g14810|protein_coding|CODING|LOC_Os05g14810.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F95|353|LOC_Os05g14810|protein_coding|CODING|LOC_Os05g14810.1|1|1) FN-81.SNP.5:8418567 chr05:008418567 0 W/8418567-8418567 FN-81 Single Base Substitution T-C INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN3593-S.SNP.5:8421932 chr05:008421932 0 W/8421932-8421932 FN3593-S SNP G -> T AC=2;AN=190;BQB=0.00090466;DP=1928;DP4=707,967,3,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000518672;MQB=4.54365e-09;MQSB=0.00470492;RPB=0.000305008;SGB=-99.6013;VDB=0.475655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.5:8432119 chr05:008432119 0 W/8432119-8432119 FN3296-S SNP G -> A AC=1;AN=184;BQB=0.919738;DP=3183;DP4=1335,1740,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35042e-10;MQSB=0.989844;RPB=0.940436;SGB=42.7914;VDB=0.259502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.5:8434291 chr05:008434291 0 W/8434291-8434291 FN3955-S SNP G -> A AC=2;AN=168;BQB=0.424773;DP=1900;DP4=745,1038,5,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.2692e-05;MQSB=0.917336;RPB=0.224574;SGB=17.3231;VDB=0.475425;EFF=INTRON(MODIFIER||||91|LOC_Os05g14840|protein_coding|CODING|LOC_Os05g14840.1|1|1) FN2092-S.SNP.5:8448640 chr05:008448640 0 W/8448640-8448640 FN2092-S SNP T -> G AC=1;AN=168;BQB=0.000255728;DP=4599;DP4=2687,1849,22,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08661e-13;MQSB=0.994694;RPB=0.480049;SGB=-330.007;VDB=0.455235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1276-S.SNP.5:8455549 chr05:008455549 0 W/8455549-8455549 FN1276-S Single Base Substitution C-T INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2682-S.SNP.5:8456202 chr05:008456202 0 W/8456202-8456202 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.898245;DP=4623;DP4=2015,2386,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72861e-07;MQSB=0.958597;RPB=0.711751;SGB=54.2646;VDB=0.957095;EFF=INTRON(MODIFIER||||224|LOC_Os05g14890|protein_coding|CODING|LOC_Os05g14890.1|2|1) FN1037-S.SNP.5:8462694 chr05:008462694 0 W/8462694-8462694 FN1037-S Single Base Substitution C-T INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN698-S.SNP.5:8467233 chr05:008467233 0 W/8467233-8467233 FN698-S Single Base Substitution C-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN4204-S.SNP.5:8468536 chr05:008468536 0 W/8468536-8468536 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.925206;DP=2614;DP4=1326,1186,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00191278;MQB=9.27237e-06;MQSB=0.859599;RPB=0.910668;SGB=34.5445;VDB=0.158012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1681-S.SNP.5:8468542 chr05:008468542 0 W/8468542-8468542 FN1681-S SNP C -> G AC=2;AN=188;BQB=0.977165;DP=3300;DP4=2162,1069,18,8;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00454545;MQB=1.83474e-12;MQSB=0.184053;RPB=0.997439;SGB=20.9711;VDB=0.378017;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.5:8471419 chr05:008471419 0 W/8471419-8471419 FN944-S Single Base Substitution A-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN-173.SNP.5:8477390 chr05:008477390 0 W/8477390-8477390 FN-173 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2459.SNP.5:8483081 chr05:008483081 0 W/8483081-8483081 FN2459 SNP T -> C AC=2;AN=200;BQB=0.997389;DP=4333;DP4=1760,2026,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.24443e-14;MQSB=0.962281;RPB=0.379855;SGB=-42.8173;VDB=0.164921;EFF=INTRON(MODIFIER||||211|LOC_Os05g14950|protein_coding|CODING|LOC_Os05g14950.1|1|1) FN1282-S.SNP.5:8489173 chr05:008489173 0 W/8489173-8489173 FN1282-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3412-S.SNP.5:8494095 chr05:008494095 0 W/8494095-8494095 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.974066;DP=2653;DP4=1300,1237,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21679e-07;MQSB=0.985652;RPB=0.238615;SGB=35.7479;VDB=0.117656;EFF=INTRON(MODIFIER||||507|LOC_Os05g14970|protein_coding|CODING|LOC_Os05g14970.1|2|1) FN3412-S.SNP.5:8494104 chr05:008494104 0 W/8494104-8494104 FN3412-S SNP G -> T AC=1;AN=184;BQB=0.95534;DP=2641;DP4=1297,1257,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.65451e-08;MQSB=0.969513;RPB=0.33197;SGB=32.2261;VDB=0.0210125;EFF=INTRON(MODIFIER||||507|LOC_Os05g14970|protein_coding|CODING|LOC_Os05g14970.1|2|1) FN2577-S.SNP.5:8507068 chr05:008507068 0 W/8507068-8507068 FN2577-S SNP A -> G AC=2;AN=198;BQB=0.974435;DP=3935;DP4=1977,1719,13,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.07825e-13;MQSB=0.58769;RPB=0.932125;SGB=55.2955;VDB=0.219566;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.5:8507500 chr05:008507500 0 W/8507500-8507500 FN418-S Single Base Substitution T-C INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1202-S.SNP.5:8508313 chr05:008508313 0 W/8508313-8508313 FN1202-S Single Base Substitution G-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2637-S.SNP.5:8518069 chr05:008518069 0 W/8518069-8518069 FN2637-S SNP T -> G AC=1;AN=200;BQB=0.167024;DP=5031;DP4=2268,2500,12,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.4683e-11;MQSB=0.894592;RPB=0.745283;SGB=94.3471;VDB=0.854896;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtG|V81|1154|LOC_Os05g15030|protein_coding|CODING|LOC_Os05g15030.1|2|1) FN-283.SNP.5:8519185 chr05:008519185 0 W/8519185-8519185 FN-283 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3355-S.SNP.5:8525806 chr05:008525806 0 W/8525806-8525806 FN3355-S SNP C -> A AC=1;AN=184;BQB=0.571085;DP=2791;DP4=1413,1264,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.04717e-10;MQSB=0.966766;RPB=0.345958;SGB=28.3187;VDB=0.0876655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.5:8525807 chr05:008525807 0 W/8525807-8525807 FN3355-S SNP A -> C AC=1;AN=184;BQB=0.985677;DP=2788;DP4=1424,1254,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.26194e-08;MQSB=0.978086;RPB=0.180243;SGB=48.7425;VDB=0.0748766;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.5:8534982 chr05:008534982 0 W/8534982-8534982 FN518-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN4030-S.SNP.5:8537187 chr05:008537187 0 W/8537187-8537187 FN4030-S SNP A -> T AC=2;AN=168;BQB=0.983387;DP=2957;DP4=1078,1736,8,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.74996e-16;MQSB=0.961176;RPB=0.999305;SGB=89.641;VDB=0.399134;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.5:8539923 chr05:008539923 0 W/8539923-8539923 FN507-S Single Base Substitution C-A INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN1382-S.SNP.5:8540221 chr05:008540221 0 W/8540221-8540221 FN1382-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3983-S.SNP.5:8542120 chr05:008542120 0 W/8542120-8542120 FN3983-S SNP A -> G AC=1;AN=168;BQB=0.782303;DP=2940;DP4=1596,1209,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.67245e-10;MQSB=0.674379;RPB=0.823882;SGB=9.91396;VDB=0.762878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.5:8548598 chr05:008548598 0 W/8548598-8548598 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.624617;DP=8480;DP4=2905,5111,13,5;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.264505;MQB=0.24914;MQSB=0;RPB=0.214885;SGB=54.6902;VDB=0.648467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.5:8555260 chr05:008555260 0 W/8555260-8555260 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.643756;DP=4669;DP4=2056,2425,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13011e-14;MQSB=0.984174;RPB=0.953715;SGB=100.316;VDB=0.2937;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.5:8560094 chr05:008560094 0 W/8560094-8560094 FN4189-S SNP T -> G AC=1;AN=170;BQB=0.992622;DP=2413;DP4=1054,1293,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00331537;MQB=2.80992e-06;MQSB=0.00210081;RPB=0.659964;SGB=56.7575;VDB=0.723816;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.5:8562474 chr05:008562474 0 W/8562474-8562474 FN2223-S SNP G -> T AC=2;AN=190;BQB=0.837778;DP=5505;DP4=2290,2815,27,26;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0.0457766;MQB=0.61135;MQSB=6.13781e-18;RPB=0.987856;SGB=120.707;VDB=0.111992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.5:8567957 chr05:008567957 0 W/8567957-8567957 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.864843;DP=4280;DP4=2009,2053,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.02405e-14;MQSB=0.80491;RPB=0.803157;SGB=72.5051;VDB=0.501101;EFF=INTRON(MODIFIER||||919|LOC_Os05g15090|protein_coding|CODING|LOC_Os05g15090.1|3|1) FN554-S.SNP.5:8574267 chr05:008574267 0 W/8574267-8574267 FN554-S Single Base Substitution C-T INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN554-S.SNP.5:8574268 chr05:008574268 0 W/8574268-8574268 FN554-S Single Base Substitution C-T INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1606-S.SNP.5:8576398 chr05:008576398 0 W/8576398-8576398 FN1606-S Single Base Substitution G-A INTRON Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN892-S.SNP.5:8580899 chr05:008580899 0 W/8580899-8580899 FN892-S Single Base Substitution G-A INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1600-S.SNP.5:8586477 chr05:008586477 0 W/8586477-8586477 FN1600-S Single Base Substitution G-A INTRON HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2655-S.SNP.5:8593089 chr05:008593089 0 W/8593089-8593089 FN2655-S SNP A -> T AC=2;AN=200;BQB=0.94203;DP=5041;DP4=2209,2580,29,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.73678e-28;MQSB=0.930512;RPB=0.663712;SGB=-167.125;VDB=0.0138829;EFF=START_GAINED(LOW||||478|LOC_Os05g15150|protein_coding|CODING|LOC_Os05g15150.1|3|1),UTR_5_PRIME(MODIFIER||1360||478|LOC_Os05g15150|protein_coding|CODING|LOC_Os05g15150.1|3|1) FN2430.SNP.5:8600606 chr05:008600606 0 W/8600606-8600606 FN2430 SNP C -> G AC=2;AN=200;BQB=0.725105;DP=1726;DP4=646,970,6,8;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=4.08558e-06;MQSB=2.22133e-05;RPB=0.421036;SGB=58.8698;VDB=0.000235482;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A13G|404|LOC_Os05g15160|protein_coding|CODING|LOC_Os05g15160.1|1|1) W502-3-4.SNP.5:8607756 chr05:008607756 0 W/8607756-8607756 W502-3-4 Single Base Substitution T-A INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1065-S.SNP.5:8611978 chr05:008611978 0 W/8611978-8611978 FN1065-S Single Base Substitution G-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3282-S.SNP.5:8619525 chr05:008619525 0 W/8619525-8619525 FN3282-S SNP C -> G AC=1;AN=184;BQB=0.917506;DP=2951;DP4=1399,1460,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05383e-09;MQSB=0.996297;RPB=0.540263;SGB=71.3514;VDB=0.719998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1678-S.SNP.5:8619562 chr05:008619562 0 W/8619562-8619562 FN1678-S SNP C -> A AC=1;AN=188;BQB=0.99785;DP=2425;DP4=1198,1201,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.73164e-05;MQSB=0.999921;RPB=0.995857;SGB=10.8165;VDB=0.465515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.5:8621754 chr05:008621754 0 W/8621754-8621754 FN2329 SNP C -> T AC=1;AN=192;BQB=0.594907;DP=4316;DP4=2189,1823,5,4;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000463392;MQB=6.71706e-05;MQSB=9.03396e-05;RPB=0.909474;SGB=21.9585;VDB=0.914396;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S254|358|LOC_Os05g15190|protein_coding|CODING|LOC_Os05g15190.1|4|1) FN1762-S.SNP.5:8622350 chr05:008622350 0 W/8622350-8622350 FN1762-S SNP G -> T AC=2;AN=188;BQB=0.961462;DP=2358;DP4=1210,1089,9,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.31739e-08;MQSB=0.978257;RPB=0.545826;SGB=46.6141;VDB=0.315553;EFF=INTRON(MODIFIER||||358|LOC_Os05g15190|protein_coding|CODING|LOC_Os05g15190.1|5|1) FN-54.SNP.5:8624488 chr05:008624488 0 W/8624488-8624488 FN-54 Single Base Substitution G-A INTERGENIC HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2311.SNP.5:8625559 chr05:008625559 0 W/8625559-8625559 FN2311 SNP G -> A AC=1;AN=192;BQB=0.194882;DP=4566;DP4=2202,2063,15,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.24061e-10;MQSB=0.983333;RPB=0.953799;SGB=15.1765;VDB=0.702192;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.5:8628326 chr05:008628326 0 W/8628326-8628326 FN3510-S SNP G -> T AC=1;AN=188;BQB=0.937835;DP=1824;DP4=993,635,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00109649;MQB=0.00163163;MQSB=8.91975e-09;RPB=0.86635;SGB=44.4357;VDB=0.708194;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G382|513|LOC_Os05g15200|protein_coding|CODING|LOC_Os05g15200.1|2|1) FN-311.SNP.5:8631252 chr05:008631252 0 W/8631252-8631252 FN-311 Single Base Substitution C-G INTRON HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1450-S.SNP.5:8640067 chr05:008640067 0 W/8640067-8640067 FN1450-S Single Base Substitution G-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN-294.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN-294 Single Base Substitution C-T INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN-40.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN-40 Single Base Substitution C-T INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN1030-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN1030-S Single Base Substitution C-T INTERGENIC HOMO SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2129-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN2129-S SNP C -> T AC=2;AN=168;BQB=0.860271;DP=2040;DP4=1009,923,18,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.33863e-19;MQSB=0.495297;RPB=0.485102;SGB=85.0499;VDB=0.692152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN2221-S SNP C -> T AC=2;AN=188;BQB=0.947183;DP=3722;DP4=1629,1812,31,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.08012e-23;MQSB=0.0242642;RPB=0.746389;SGB=222.143;VDB=0.316133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN2344 SNP C -> T AC=1;AN=192;BQB=0.442104;DP=4559;DP4=2110,2167,17,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.25219e-15;MQSB=0.793789;RPB=0.983794;SGB=89.6809;VDB=0.280452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.64922;DP=4792;DP4=2253,2271,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.15808e-05;MQSB=0.901568;RPB=0.505175;SGB=26.6347;VDB=0.579489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN3791-S SNP C -> T AC=2;AN=190;BQB=0.886933;DP=2745;DP4=1314,1308,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.29888e-15;MQSB=0.826253;RPB=0.999463;SGB=135.619;VDB=0.306554;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 FN621-S Single Base Substitution C-T INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. W721-2-1.SNP.5:8654875 chr05:008654875 0 W/8654875-8654875 W721-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2704-S.SNP.5:8662127 chr05:008662127 0 W/8662127-8662127 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.296725;DP=4850;DP4=2099,2367,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45115e-13;MQSB=0.97787;RPB=0.531416;SGB=50.3263;VDB=0.3256;EFF=INTRON(MODIFIER||||1304|LOC_Os05g15270|protein_coding|CODING|LOC_Os05g15270.1|2|1) 706-1.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 706-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. 706-2.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 706-2 Single Base Substitution C-T INTERGENIC HET SNo: 1467, Mutant_ID: 706-2, Generation: M2, Mutations: 31, Genes: 5, Seed availability: Yes. FN-162.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN-162 Single Base Substitution C-T INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-231.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN-231 Single Base Substitution C-T INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN1228-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN1228-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1270-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN1270-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1559-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN1559-S Single Base Substitution C-T INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2342.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN2342 SNP C -> T AC=2;AN=192;BQB=0.209478;DP=5138;DP4=2381,2404,21,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.73062e-18;MQSB=0.917144;RPB=0.944145;SGB=38.6418;VDB=0.260885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN3360-S SNP C -> T AC=2;AN=184;BQB=0.998461;DP=3311;DP4=1576,1547,23,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.64643e-17;MQSB=0.997895;RPB=0.93279;SGB=134.656;VDB=0.984911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN3950-S SNP C -> T AC=2;AN=168;BQB=0.747325;DP=2784;DP4=1365,1249,25,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.63382e-22;MQSB=0.989514;RPB=0.954538;SGB=-52.5961;VDB=0.679163;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN434-S Single Base Substitution C-T INTERGENIC HOMO SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN507-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN507-S Single Base Substitution C-T INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN779-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN779-S Single Base Substitution C-T INTERGENIC HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN932-S.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 FN932-S Single Base Substitution C-T INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. W706-3-1.SNP.5:8664270 chr05:008664270 0 W/8664270-8664270 W706-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3292-S.SNP.5:8665637 chr05:008665637 0 W/8665637-8665637 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.893031;DP=3287;DP4=1585,1595,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.73275e-10;MQSB=0.758107;RPB=0.5035;SGB=49.835;VDB=0.823797;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q245*|282|LOC_Os05g15280|protein_coding|CODING|LOC_Os05g15280.1|4|1) FN1324-S.SNP.5:8667222 chr05:008667222 0 W/8667222-8667222 FN1324-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g15280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2468.SNP.5:8667222 chr05:008667222 0 W/8667222-8667222 FN2468 SNP C -> T AC=1;AN=200;BQB=0.638411;DP=4975;DP4=2458,2235,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99598e-08;MQSB=0.888566;RPB=0.627323;SGB=21.6694;VDB=0.276349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R62Q|282|LOC_Os05g15280|protein_coding|CODING|LOC_Os05g15280.1|2|1) FN2706-S.SNP.5:8667222 chr05:008667222 0 W/8667222-8667222 FN2706-S SNP C -> T AC=2;AN=200;BQB=0.496531;DP=5045;DP4=2446,2294,29,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.66777e-31;MQSB=0.681636;RPB=0.114472;SGB=180.871;VDB=0.00135524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R62Q|282|LOC_Os05g15280|protein_coding|CODING|LOC_Os05g15280.1|2|1) FN3518-S.SNP.5:8667222 chr05:008667222 0 W/8667222-8667222 FN3518-S SNP C -> T AC=2;AN=188;BQB=0.984312;DP=3075;DP4=1502,1454,19,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54588e-18;MQSB=0.973932;RPB=0.721645;SGB=130.758;VDB=0.0571157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R62Q|282|LOC_Os05g15280|protein_coding|CODING|LOC_Os05g15280.1|2|1) FN3664-S.SNP.5:8667222 chr05:008667222 0 W/8667222-8667222 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.991184;DP=2948;DP4=1623,1201,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.75327e-08;MQSB=0.992985;RPB=0.888731;SGB=39.6545;VDB=0.291443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R62Q|282|LOC_Os05g15280|protein_coding|CODING|LOC_Os05g15280.1|2|1) FN4148-S.SNP.5:8668265 chr05:008668265 0 W/8668265-8668265 FN4148-S SNP A -> C AC=1;AN=170;BQB=0.986709;DP=2620;DP4=1136,1425,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000381679;MQB=4.16684e-06;MQSB=0.542361;RPB=0.278815;SGB=47.8722;VDB=0.845817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.5:8669144 chr05:008669144 0 W/8669144-8669144 FN2190-S SNP C -> T AC=1;AN=188;BQB=0.847071;DP=3817;DP4=2142,1389,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.97876e-06;MQSB=0.330548;RPB=0.992748;SGB=10.8904;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.5:8670060 chr05:008670060 0 W/8670060-8670060 FN-149 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g15290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1431-S.SNP.5:8682263 chr05:008682263 0 W/8682263-8682263 FN1431-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g15320 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN2626-S.SNP.5:8686306 chr05:008686306 0 W/8686306-8686306 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.909123;DP=4991;DP4=2452,2215,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31505e-09;MQSB=0.990835;RPB=0.998894;SGB=21.6694;VDB=0.83284;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.5:8702055 chr05:008702055 0 W/8702055-8702055 FN4182-S SNP C -> A AC=1;AN=170;BQB=0.953505;DP=2046;DP4=1326,654,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.67151e-05;MQSB=0.717561;RPB=0.950651;SGB=30.1021;VDB=0.989019;EFF=INTRON(MODIFIER||||191|LOC_Os05g15370|protein_coding|CODING|LOC_Os05g15370.1|1|1) FN483-S.SNP.5:8703602 chr05:008703602 0 W/8703602-8703602 FN483-S Single Base Substitution T-A INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN483-S.SNP.5:8703609 chr05:008703609 0 W/8703609-8703609 FN483-S Single Base Substitution G-A INTRON HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1744-S.SNP.5:8706149 chr05:008706149 0 W/8706149-8706149 FN1744-S SNP G -> T AC=2;AN=188;BQB=0.589423;DP=2407;DP4=1109,1254,13,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.7226e-13;MQSB=0.737501;RPB=0.809483;SGB=-77.9263;VDB=0.943883;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S126I|203|LOC_Os05g15380|protein_coding|CODING|LOC_Os05g15380.1|2|1) FN3913-S.SNP.5:8706149 chr05:008706149 0 W/8706149-8706149 FN3913-S SNP G -> T AC=2;AN=158;BQB=0.923743;DP=2473;DP4=1265,1116,15,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.54242e-18;MQSB=0.405135;RPB=0.999931;SGB=104.832;VDB=0.368249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S126I|203|LOC_Os05g15380|protein_coding|CODING|LOC_Os05g15380.1|2|1) FN434-S.SNP.5:8715917 chr05:008715917 0 W/8715917-8715917 FN434-S Single Base Substitution G-A INTERGENIC HOMO SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN1227-S.SNP.5:8717667 chr05:008717667 0 W/8717667-8717667 FN1227-S Single Base Substitution A-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN414-S.SNP.5:8718539 chr05:008718539 0 W/8718539-8718539 FN414-S Single Base Substitution G-C INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1258-S.SNP.5:8720311 chr05:008720311 0 W/8720311-8720311 FN1258-S Single Base Substitution A-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN4231-S.SNP.5:8723386 chr05:008723386 0 W/8723386-8723386 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.560886;DP=2851;DP4=1245,1536,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.89733e-05;MQSB=0.102552;RPB=0.968868;SGB=56.7575;VDB=0.740922;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V302I|1352|LOC_Os05g15430|protein_coding|CODING|LOC_Os05g15430.1|1|1) FN471-S.SNP.5:8726472 chr05:008726472 0 W/8726472-8726472 FN471-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os05g15430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2403.SNP.5:8732598 chr05:008732598 0 W/8732598-8732598 FN2403 SNP C -> G AC=1;AN=200;BQB=0.529993;DP=4882;DP4=2171,2448,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.41821e-14;MQSB=0.972675;RPB=0.0968589;SGB=95.7111;VDB=0.81806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D71H|183|LOC_Os05g15450|protein_coding|CODING|LOC_Os05g15450.1|1|1) FN948-S.SNP.5:8734258 chr05:008734258 0 W/8734258-8734258 FN948-S Single Base Substitution T-C INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2602-S.SNP.5:8742629 chr05:008742629 0 W/8742629-8742629 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.998203;DP=5544;DP4=2949,2307,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.12518;MQB=0.829116;MQSB=6.62262e-37;RPB=0.0916729;SGB=21.559;VDB=0.58437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V622M|1683|LOC_Os05g15470|protein_coding|CODING|LOC_Os05g15470.1|3|1) FN944-S.SNP.5:8748798 chr05:008748798 0 W/8748798-8748798 FN944-S Single Base Substitution G-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1610-S.SNP.5:8755189 chr05:008755189 0 W/8755189-8755189 FN1610-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g15480 retrotransposon protein, putative, unclassified, expressed SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2171-S.SNP.5:8755448 chr05:008755448 0 W/8755448-8755448 FN2171-S SNP T -> C AC=2;AN=168;BQB=0.922821;DP=2310;DP4=1447,809,12,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.15394e-05;MQSB=0.624268;RPB=0.401502;SGB=-58.653;VDB=0.0744328;EFF=INTRON(MODIFIER||||274|LOC_Os05g15480|protein_coding|CODING|LOC_Os05g15480.1|1|1) FN456-S.SNP.5:8766577 chr05:008766577 0 W/8766577-8766577 FN456-S Single Base Substitution C-T INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-70.SNP.5:8767451 chr05:008767451 0 W/8767451-8767451 FN-70 Single Base Substitution C-T INTRON HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1411-S.SNP.5:8769445 chr05:008769445 0 W/8769445-8769445 FN1411-S Single Base Substitution C-T INTRON HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2121-S.SNP.5:8770012 chr05:008770012 0 W/8770012-8770012 FN2121-S SNP G -> T AC=2;AN=168;BQB=0.940362;DP=4114;DP4=1968,2070,35,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.36807e-33;MQSB=0.969984;RPB=0.852529;SGB=-269.254;VDB=0.8657;EFF=INTRON(MODIFIER||||525|LOC_Os05g15510|protein_coding|CODING|LOC_Os05g15510.1|7|1),INTRON(MODIFIER||||525|LOC_Os05g15510|protein_coding|CODING|LOC_Os05g15510.2|7|1) FN2121-S.SNP.5:8770013 chr05:008770013 0 W/8770013-8770013 FN2121-S SNP C -> T AC=2;AN=168;BQB=0.315167;DP=4125;DP4=1988,2058,32,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.47919e-35;MQSB=0.962888;RPB=0.984121;SGB=-411.673;VDB=0.915425;EFF=INTRON(MODIFIER||||525|LOC_Os05g15510|protein_coding|CODING|LOC_Os05g15510.1|7|1),INTRON(MODIFIER||||525|LOC_Os05g15510|protein_coding|CODING|LOC_Os05g15510.2|7|1) FN768-S.SNP.5:8780327 chr05:008780327 0 W/8780327-8780327 FN768-S Single Base Substitution A-T INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN1519-S.SNP.5:8785786 chr05:008785786 0 W/8785786-8785786 FN1519-S Single Base Substitution A-G INTRON HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1184-S.SNP.5:8788238 chr05:008788238 0 W/8788238-8788238 FN1184-S Single Base Substitution G-A INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3436-S.SNP.5:8795952 chr05:008795952 0 W/8795952-8795952 FN3436-S SNP G -> C AC=1;AN=184;BQB=0.97822;DP=2693;DP4=1177,1447,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0226513;MQB=0.04863;MQSB=2.73044e-23;RPB=0.604148;SGB=39.2697;VDB=0.36087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.5:8799907 chr05:008799907 0 W/8799907-8799907 FN1548-S SNP A -> G AC=2;AN=188;BQB=0.777099;DP=3573;DP4=1375,2156,19,18;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.0853624;MQB=0.991634;MQSB=3.53934e-13;RPB=0.750984;SGB=-3.59057;VDB=0.494667;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L424|846|LOC_Os05g15550|protein_coding|CODING|LOC_Os05g15550.1|3|1) FN4064-S.SNP.5:8800292 chr05:008800292 0 W/8800292-8800292 FN4064-S SNP G -> T AC=1;AN=168;BQB=0.943249;DP=3442;DP4=2048,1168,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00435793;MQB=0.000644509;MQSB=0.296522;RPB=0.886462;SGB=27.8864;VDB=0.750607;EFF=INTRON(MODIFIER||||846|LOC_Os05g15550|protein_coding|CODING|LOC_Os05g15550.1|2|1) FN2304.SNP.5:8800546 chr05:008800546 0 W/8800546-8800546 FN2304 SNP A -> C AC=1;AN=192;BQB=0.0444009;DP=9817;DP4=4116,4683,56,51;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0;MQSB=2.81359e-06;RPB=0.691363;SGB=-1748.36;VDB=0.959571;EFF=INTRON(MODIFIER||||846|LOC_Os05g15550|protein_coding|CODING|LOC_Os05g15550.1|2|1) FN2612-S.SNP.5:8810308 chr05:008810308 0 W/8810308-8810308 FN2612-S SNP C -> A AC=1;AN=198;BQB=0.932455;DP=4248;DP4=2035,1997,15,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00117702;MQB=2.9248e-15;MQSB=0.596319;RPB=0.7906;SGB=68.2711;VDB=0.250379;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L35|987|LOC_Os05g15560|protein_coding|CODING|LOC_Os05g15560.1|3|1) FN4240-S.SNP.5:8810601 chr05:008810601 0 W/8810601-8810601 FN4240-S SNP A -> G AC=2;AN=170;BQB=0.929481;DP=2636;DP4=1318,1239,9,17;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0170713;MQB=0.311099;MQSB=0.925158;RPB=0.728434;SGB=110.069;VDB=0.740628;EFF=INTRON(MODIFIER||||987|LOC_Os05g15560|protein_coding|CODING|LOC_Os05g15560.1|2|1) FN3817-S.SNP.5:8821010 chr05:008821010 0 W/8821010-8821010 FN3817-S SNP A -> T AC=1;AN=190;BQB=0.98391;DP=4717;DP4=2065,2427,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.143735;MQB=0.788413;MQSB=0.899593;RPB=0.971403;SGB=25.439;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.5:8821013 chr05:008821013 0 W/8821013-8821013 FN3817-S SNP A -> G AC=1;AN=190;BQB=0.865732;DP=4699;DP4=2070,2383,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.138966;MQB=0.843242;MQSB=0.845827;RPB=0.93952;SGB=28.9929;VDB=0.448526;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.5:8823162 chr05:008823162 0 W/8823162-8823162 FN512-S Single Base Substitution G-A INTRON HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1192-S.SNP.5:8825879 chr05:008825879 0 W/8825879-8825879 FN1192-S Single Base Substitution C-T INTRON HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3296-S.SNP.5:8825879 chr05:008825879 0 W/8825879-8825879 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.881182;DP=3338;DP4=1489,1702,5,25;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0161774;MQB=7.78175e-14;MQSB=0.0642244;RPB=0.823455;SGB=-456.643;VDB=3.22619e-05;EFF=INTRON(MODIFIER||||1789|LOC_Os05g15580|protein_coding|CODING|LOC_Os05g15580.1|3|1) FN3850-S.SNP.5:8825879 chr05:008825879 0 W/8825879-8825879 FN3850-S SNP C -> T AC=2;AN=158;BQB=0.90801;DP=2612;DP4=1146,1339,4,18;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.0118683;MQB=1.45836e-06;MQSB=0.00214616;RPB=0.493556;SGB=-41.0539;VDB=0.0548302;EFF=INTRON(MODIFIER||||1789|LOC_Os05g15580|protein_coding|CODING|LOC_Os05g15580.1|3|1) FN3945-S.SNP.5:8825879 chr05:008825879 0 W/8825879-8825879 FN3945-S SNP C -> T AC=1;AN=168;BQB=0.872654;DP=2812;DP4=1219,1446,7,18;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0152916;MQB=3.27627e-09;MQSB=0.00119771;RPB=0.622425;SGB=-336.03;VDB=0.00135417;EFF=INTRON(MODIFIER||||1789|LOC_Os05g15580|protein_coding|CODING|LOC_Os05g15580.1|3|1) FN754-S.SNP.5:8825879 chr05:008825879 0 W/8825879-8825879 FN754-S Single Base Substitution C-T INTRON HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1106-S.SNP.5:8828461 chr05:008828461 0 W/8828461-8828461 FN1106-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN953-S.SNP.5:8829923 chr05:008829923 0 W/8829923-8829923 FN953-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1302-S.SNP.5:8831419 chr05:008831419 0 W/8831419-8831419 FN1302-S Single Base Substitution G-A INTRON HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN819-S.SNP.5:8834746 chr05:008834746 0 W/8834746-8834746 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3521-S.SNP.5:8839104 chr05:008839104 0 W/8839104-8839104 FN3521-S SNP T -> C AC=1;AN=188;BQB=0.0552149;DP=3527;DP4=1627,1286,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18144e-06;MQSB=0.992604;RPB=0.0146086;SGB=-131.06;VDB=0.574216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.5:8840658 chr05:008840658 0 W/8840658-8840658 FN2223-S SNP G -> A AC=1;AN=188;BQB=0.272464;DP=5276;DP4=2160,2650,2,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000189538;MQB=1.69251e-08;MQSB=0.983564;RPB=0.593506;SGB=-153.196;VDB=0.722787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.5:8841031 chr05:008841031 0 W/8841031-8841031 FN3698-S SNP T -> A AC=1;AN=190;BQB=0.999878;DP=2991;DP4=1419,1465,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.46543e-10;MQSB=0.999837;RPB=0.0162797;SGB=62.7569;VDB=0.0268117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.5:8844724 chr05:008844724 0 W/8844724-8844724 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.678753;DP=4175;DP4=1750,2268,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.20536e-12;MQSB=0.286081;RPB=0.867273;SGB=48.493;VDB=0.235984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.5:8849718 chr05:008849718 0 W/8849718-8849718 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.26659;DP=3770;DP4=1938,1766,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30934e-11;MQSB=0.999961;RPB=0.876825;SGB=-42.92;VDB=0.184724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.5:8850798 chr05:008850798 0 W/8850798-8850798 FN1334-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2230-S.SNP.5:8850798 chr05:008850798 0 W/8850798-8850798 FN2230-S SNP T -> A AC=2;AN=188;BQB=0.256518;DP=4921;DP4=2394,2002,25,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000203211;MQB=5.61411e-25;MQSB=0.48081;RPB=0.19875;SGB=142.717;VDB=0.991879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.5:8852960 chr05:008852960 0 W/8852960-8852960 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.467264;DP=10001;DP4=4962,4259,13,2;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000158666;MQSB=3.41813e-13;RPB=0.459549;SGB=43.7442;VDB=0.1483;EFF=INTRON(MODIFIER||||120|LOC_Os05g15650|protein_coding|CODING|LOC_Os05g15650.1|1|1) FN3383-S.SNP.5:8861802 chr05:008861802 0 W/8861802-8861802 FN3383-S SNP G -> T AC=1;AN=184;BQB=0.996065;DP=3203;DP4=1322,1752,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90793e-11;MQSB=0.991547;RPB=0.902094;SGB=93.9603;VDB=0.896676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.5:8866403 chr05:008866403 0 W/8866403-8866403 FN3869-S SNP A -> G AC=2;AN=158;BQB=0.982156;DP=2477;DP4=1223,1125,16,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.98578e-16;MQSB=0.976317;RPB=0.859848;SGB=23.9973;VDB=0.523002;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.5:8869297 chr05:008869297 0 W/8869297-8869297 FN713-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN_552-1-1.SNP.5:8870154 chr05:008870154 0 W/8870154-8870154 FN_552-1-1 Single Base Substitution C-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3694-S.SNP.5:8872570 chr05:008872570 0 W/8872570-8872570 FN3694-S SNP C -> A AC=1;AN=190;BQB=0.916845;DP=2977;DP4=1525,1323,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000210955;MQSB=0.804076;RPB=0.33543;SGB=18.3316;VDB=0.0536032;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.5:8876354 chr05:008876354 0 W/8876354-8876354 FN-68 Single Base Substitution A-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1344-S.SNP.5:8882143 chr05:008882143 0 W/8882143-8882143 FN1344-S Single Base Substitution G-T INTRON HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN75-S-43.SNP.5:8890482 chr05:008890482 0 W/8890482-8890482 FN75-S-43 SNP C -> G AC=1;AN=188;BQB=0.963669;DP=5091;DP4=2393,2276,10,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.63369e-14;MQSB=0.999264;RPB=0.477343;SGB=-7.68321;VDB=0.496571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.5:8890715 chr05:008890715 0 W/8890715-8890715 FN3521-S SNP A -> T AC=1;AN=188;BQB=0.962825;DP=2705;DP4=1311,1305,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.54952e-06;MQSB=0.994042;RPB=0.833314;SGB=28.8977;VDB=0.780124;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.5:8893317 chr05:008893317 0 W/8893317-8893317 FN-131 Single Base Substitution T-C INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN908-S.SNP.5:8899875 chr05:008899875 0 W/8899875-8899875 FN908-S Single Base Substitution T-A INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3420-S.SNP.5:8901117 chr05:008901117 0 W/8901117-8901117 FN3420-S SNP C -> G AC=1;AN=184;BQB=0.7132;DP=2619;DP4=1418,1111,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000381825;MQB=3.48036e-06;MQSB=0.991207;RPB=0.539839;SGB=13.188;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.5:8911579 chr05:008911579 0 W/8911579-8911579 FN1392-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2296.SNP.5:8917523 chr05:008917523 0 W/8917523-8917523 FN2296 SNP T -> A AC=1;AN=192;BQB=0.229623;DP=4276;DP4=1979,2037,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09304e-13;MQSB=0.756484;RPB=0.192439;SGB=82.5522;VDB=0.231336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.5:8921660 chr05:008921660 0 W/8921660-8921660 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.174322;DP=4430;DP4=1871,2257,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00180587;MQB=5.48465e-08;MQSB=0.932533;RPB=0.508072;SGB=36.6644;VDB=0.727166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.5:8921993 chr05:008921993 0 W/8921993-8921993 FN3695-S SNP G -> T AC=2;AN=190;BQB=0.855255;DP=2109;DP4=1273,749,8,2;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00379327;MQB=6.3461e-06;MQSB=0.153512;RPB=0.902689;SGB=39.9877;VDB=0.340495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G10V|1388|LOC_Os05g15810|protein_coding|CODING|LOC_Os05g15810.1|1|1) FN2285.SNP.5:8926635 chr05:008926635 0 W/8926635-8926635 FN2285 SNP A -> G AC=1;AN=192;BQB=0.662824;DP=4660;DP4=2212,2136,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0150215;MQB=0.380088;MQSB=1.0983e-07;RPB=0.857841;SGB=61.1661;VDB=0.840279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.5:8927453 chr05:008927453 0 W/8927453-8927453 FN-185 Single Base Substitution G-C INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN266-S.SNP.5:8934547 chr05:008934547 0 W/8934547-8934547 FN266-S Single Base Substitution C-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN266-S.SNP.5:8934549 chr05:008934549 0 W/8934549-8934549 FN266-S Single Base Substitution G-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN417-S.SNP.5:8935485 chr05:008935485 0 W/8935485-8935485 FN417-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g15820 retrotransposon protein, putative, unclassified, expressed SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN-125.SNP.5:8935951 chr05:008935951 0 W/8935951-8935951 FN-125 Single Base Substitution C-T UTR_5_PRIME HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-125.SNP.5:8935955 chr05:008935955 0 W/8935955-8935955 FN-125 Single Base Substitution T-C UTR_5_PRIME HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN489-S.SNP.5:8936867 chr05:008936867 0 W/8936867-8936867 FN489-S Single Base Substitution A-G START_GAINED HET LOC_Os05g15820 retrotransposon protein, putative, unclassified, expressed SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN-411.SNP.5:8938715 chr05:008938715 0 W/8938715-8938715 FN-411 Single Base Substitution A-T INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN931-S.SNP.5:8942192 chr05:008942192 0 W/8942192-8942192 FN931-S Single Base Substitution A-T INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN931-S.SNP.5:8942193 chr05:008942193 0 W/8942193-8942193 FN931-S Single Base Substitution A-T INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN1634-S.SNP.5:8950485 chr05:008950485 0 W/8950485-8950485 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN662-S.SNP.5:8953739 chr05:008953739 0 W/8953739-8953739 FN662-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g15860 retrotransposon protein, putative, unclassified, expressed SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN585-S.SNP.5:8957769 chr05:008957769 0 W/8957769-8957769 FN585-S Single Base Substitution A-T INTRON HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN229-S.SNP.5:8959723 chr05:008959723 0 W/8959723-8959723 FN229-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g15880 glycosyl hydrolase, putative, expressed SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2226-S.SNP.5:8962216 chr05:008962216 0 W/8962216-8962216 FN2226-S SNP G -> A AC=1;AN=188;BQB=0.194359;DP=4495;DP4=2335,1870,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.51599e-07;MQSB=0.932771;RPB=0.795131;SGB=-16.5452;VDB=0.0826139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.5:8964059 chr05:008964059 0 W/8964059-8964059 FN2450 SNP T -> C AC=1;AN=200;BQB=0.918538;DP=4693;DP4=2350,2028,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000213083;MQB=1.56842e-06;MQSB=2.28007e-07;RPB=0.80327;SGB=1.46408;VDB=0.223892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.5:8964460 chr05:008964460 0 W/8964460-8964460 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.996417;DP=4516;DP4=2096,2117,19,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.81037e-19;MQSB=0.990359;RPB=0.0417656;SGB=132.552;VDB=0.687447;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.5:8969944 chr05:008969944 0 W/8969944-8969944 FN1176-S Single Base Substitution C-A INTRON HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN928-S.SNP.5:8976316 chr05:008976316 0 W/8976316-8976316 FN928-S Single Base Substitution A-C INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. W466-5-1.SNP.5:8984856 chr05:008984856 0 W/8984856-8984856 W466-5-1 Single Base Substitution G-A INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2742-S.SNP.5:8992089 chr05:008992089 0 W/8992089-8992089 FN2742-S SNP C -> G AC=1;AN=200;BQB=0.847149;DP=4379;DP4=1940,2250,13,6;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00890614;MQB=0.0147223;MQSB=0.000141263;RPB=0.381532;SGB=81.8956;VDB=0.224432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.5:9003952 chr05:009003952 0 W/9003952-9003952 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.00774756;DP=2957;DP4=1489,1432,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.45761e-08;MQSB=0.987299;RPB=0.790855;SGB=27.0464;VDB=0.967759;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.5:9010738 chr05:009010738 0 W/9010738-9010738 FN-387 Single Base Substitution T-C INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1229-S.SNP.5:9014962 chr05:009014962 0 W/9014962-9014962 FN1229-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN959-S.SNP.5:9017603 chr05:009017603 0 W/9017603-9017603 FN959-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1367-S.SNP.5:9020208 chr05:009020208 0 W/9020208-9020208 FN1367-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN2440.SNP.5:9026728 chr05:009026728 0 W/9026728-9026728 FN2440 SNP T -> C AC=1;AN=200;BQB=0.875224;DP=3051;DP4=1134,1716,5,16;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.522452;MQB=0.227118;MQSB=0;RPB=0.302708;SGB=91.1059;VDB=0.752032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K1926R|1979|LOC_Os05g15990|protein_coding|CODING|LOC_Os05g15990.1|4|1) FN1725-S.SNP.5:9034713 chr05:009034713 0 W/9034713-9034713 FN1725-S SNP A -> T AC=1;AN=188;BQB=0.280299;DP=3841;DP4=1815,1977,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.50447e-11;MQSB=0.881001;RPB=0.363779;SGB=-40.1048;VDB=0.87188;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.5:9039414 chr05:009039414 0 W/9039414-9039414 FN748-S Single Base Substitution G-T INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1075-S.SNP.5:9040212 chr05:009040212 0 W/9040212-9040212 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. W252-6-1.SNP.5:9044521 chr05:009044521 0 W/9044521-9044521 W252-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3743-S.SNP.5:9045902 chr05:009045902 0 W/9045902-9045902 FN3743-S SNP C -> T AC=1;AN=190;BQB=0.915742;DP=2546;DP4=1310,1131,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52963e-08;MQSB=0.969816;RPB=0.420953;SGB=71.8647;VDB=0.145867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.5:9047756 chr05:009047756 0 W/9047756-9047756 FN1211-S Single Base Substitution G-A INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1263-S.SNP.5:9053231 chr05:009053231 0 W/9053231-9053231 FN1263-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g16020 retrotransposon protein, putative, unclassified, expressed SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN951-S.SNP.5:9053684 chr05:009053684 0 W/9053684-9053684 FN951-S Single Base Substitution C-A INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2612-S.SNP.5:9064783 chr05:009064783 0 W/9064783-9064783 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.652576;DP=4226;DP4=2139,1871,23,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.33472e-16;MQSB=0.250934;RPB=0.570104;SGB=108.456;VDB=0.127524;EFF=INTRON(MODIFIER||||177|LOC_Os05g16060|protein_coding|CODING|LOC_Os05g16060.1|1|1) FN3401-S.SNP.5:9072093 chr05:009072093 0 W/9072093-9072093 FN3401-S SNP T -> A AC=1;AN=184;BQB=0.974805;DP=2305;DP4=1054,1108,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21476e-05;MQSB=0.977743;RPB=0.485091;SGB=39.699;VDB=0.522432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.5:9096123 chr05:009096123 0 W/9096123-9096123 FN2566-S SNP A -> G AC=2;AN=198;BQB=0.906602;DP=4347;DP4=2077,2078,9,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.32029e-12;MQSB=0.987694;RPB=0.997243;SGB=90.9049;VDB=0.32397;EFF=INTERGENIC(MODIFIER||||||||||1) FN-251.SNP.5:9096672 chr05:009096672 0 W/9096672-9096672 FN-251 Single Base Substitution G-T INTERGENIC HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN3463-S.SNP.5:9097313 chr05:009097313 0 W/9097313-9097313 FN3463-S SNP T -> C AC=1;AN=184;BQB=0.881282;DP=2695;DP4=1355,1259,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22713e-08;MQSB=0.986699;RPB=0.934329;SGB=53.2642;VDB=0.589161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.5:9128311 chr05:009128311 0 W/9128311-9128311 FN2649-S SNP T -> C AC=1;AN=200;BQB=0.977559;DP=5196;DP4=2551,2395,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07591e-13;MQSB=0.905264;RPB=0.899288;SGB=20.7261;VDB=0.450622;EFF=INTRON(MODIFIER||||433|LOC_Os05g16140|protein_coding|CODING|LOC_Os05g16140.1|1|1) FN2779-S.SNP.5:9129215 chr05:009129215 0 W/9129215-9129215 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.79399;DP=3699;DP4=1621,1786,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2731e-14;MQSB=0.804752;RPB=0.654706;SGB=118.476;VDB=0.711865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H170Y|433|LOC_Os05g16140|protein_coding|CODING|LOC_Os05g16140.1|1|1) FN2379.SNP.5:9131744 chr05:009131744 0 W/9131744-9131744 FN2379 SNP G -> A AC=1;AN=192;BQB=0.0118257;DP=4574;DP4=2095,2119,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.41986e-07;MQSB=0.984587;RPB=0.104555;SGB=-88.6243;VDB=0.918046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.5:9140200 chr05:009140200 0 W/9140200-9140200 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.990079;DP=4892;DP4=2467,2136,7,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0079722;MQB=0.0956426;MQSB=0.000262751;RPB=0.796095;SGB=24.2746;VDB=0.847234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.5:9141158 chr05:009141158 0 W/9141158-9141158 FN3781-S SNP G -> A AC=1;AN=190;BQB=0.914553;DP=2543;DP4=1242,1176,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18518e-05;MQSB=0.995976;RPB=0.752682;SGB=30.8803;VDB=0.920438;EFF=INTRON(MODIFIER||||111|LOC_Os05g16170|protein_coding|CODING|LOC_Os05g16170.1|1|1) FN577-S.SNP.5:9146993 chr05:009146993 0 W/9146993-9146993 FN577-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN4163-S.SNP.5:9148067 chr05:009148067 0 W/9148067-9148067 FN4163-S SNP T -> A AC=1;AN=170;BQB=0.91011;DP=2632;DP4=1249,1308,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.84128e-06;MQSB=0.997886;RPB=0.8501;SGB=34.5445;VDB=0.912078;EFF=INTRON(MODIFIER||||464|LOC_Os05g16180|protein_coding|CODING|LOC_Os05g16180.1|1|1) FN2174-S.SNP.5:9151564 chr05:009151564 0 W/9151564-9151564 FN2174-S SNP C -> A AC=1;AN=168;BQB=0.031604;DP=3576;DP4=1684,1849,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12911e-09;MQSB=0.991578;RPB=0.988725;SGB=-39.5049;VDB=0.703028;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T1018|1044|LOC_Os05g16200|protein_coding|CODING|LOC_Os05g16200.1|3|1) FN1647-S.SNP.5:9160069 chr05:009160069 0 W/9160069-9160069 FN1647-S Single Base Substitution C-A INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1647-S.SNP.5:9160070 chr05:009160070 0 W/9160070-9160070 FN1647-S Single Base Substitution C-A INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2595-S.SNP.5:9163060 chr05:009163060 0 W/9163060-9163060 FN2595-S SNP C -> A AC=2;AN=198;BQB=0.767922;DP=3713;DP4=1524,1904,9,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.29713e-13;MQSB=0.479133;RPB=0.969188;SGB=100.095;VDB=0.507756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.5:9163394 chr05:009163394 0 W/9163394-9163394 FN2462 SNP G -> T AC=1;AN=200;BQB=0.814357;DP=3380;DP4=1729,1443,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.87716e-06;MQSB=0.16043;RPB=0.856297;SGB=33.0593;VDB=0.692611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.5:9164624 chr05:009164624 0 W/9164624-9164624 FN3339-S SNP T -> G AC=1;AN=184;BQB=0.980241;DP=4153;DP4=1443,2530,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.7798e-09;MQSB=0.978066;RPB=0.993202;SGB=66.8296;VDB=0.0606636;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.5:9169201 chr05:009169201 0 W/9169201-9169201 FN-140 Single Base Substitution A-G INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN405-S.SNP.5:9171195 chr05:009171195 0 W/9171195-9171195 FN405-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g16210 glycine-rich protein, putative, expressed SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3570-S.SNP.5:9181951 chr05:009181951 0 W/9181951-9181951 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.975177;DP=2867;DP4=1491,1285,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.56801e-06;MQSB=0.849398;RPB=0.369828;SGB=21.8853;VDB=0.412749;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.5:9186419 chr05:009186419 0 W/9186419-9186419 FN3843-S SNP T -> C AC=1;AN=190;BQB=0.925222;DP=2492;DP4=1120,1246,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00521669;MQB=0.777406;MQSB=0.106829;RPB=0.693927;SGB=71.8647;VDB=0.98203;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.5:9191225 chr05:009191225 0 W/9191225-9191225 FN743-S Single Base Substitution T-A INTRON HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN1292-S.SNP.5:9191649 chr05:009191649 0 W/9191649-9191649 FN1292-S Single Base Substitution C-T INTRON HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3472-S.SNP.5:9193047 chr05:009193047 0 W/9193047-9193047 FN3472-S SNP T -> A AC=2;AN=184;BQB=0.725024;DP=2792;DP4=1433,1167,26,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.3712e-25;MQSB=0.990521;RPB=0.883411;SGB=169.508;VDB=0.419941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.5:9196707 chr05:009196707 0 W/9196707-9196707 FN1020-S Single Base Substitution A-G INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN510-S.SNP.5:9199546 chr05:009199546 0 W/9199546-9199546 FN510-S Single Base Substitution A-G INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2305.SNP.5:9204089 chr05:009204089 0 W/9204089-9204089 FN2305 SNP G -> A AC=1;AN=192;BQB=0.941984;DP=4542;DP4=2206,2040,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00242184;MQB=8.96454e-11;MQSB=0.659908;RPB=0.930562;SGB=39.1713;VDB=0.671425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G432S|894|LOC_Os05g16260|protein_coding|CODING|LOC_Os05g16260.1|2|1) FN3815-S.SNP.5:9205643 chr05:009205643 0 W/9205643-9205643 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.952713;DP=2990;DP4=1351,1547,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38714e-06;MQSB=0.583003;RPB=0.950165;SGB=25.439;VDB=0.7858;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L830I|894|LOC_Os05g16260|protein_coding|CODING|LOC_Os05g16260.1|5|1) FN2423.SNP.5:9207596 chr05:009207596 0 W/9207596-9207596 FN2423 SNP C -> A AC=1;AN=200;BQB=0.652106;DP=5286;DP4=2343,2666,7,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0187287;MQB=0.0549332;MQSB=1.05762e-11;RPB=0.824663;SGB=40.2696;VDB=0.995836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R1157M|1360|LOC_Os05g16270|protein_coding|CODING|LOC_Os05g16270.1|7|1) FN3798-S.SNP.5:9211264 chr05:009211264 0 W/9211264-9211264 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.969092;DP=2761;DP4=1314,1356,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.265835;MQSB=0.656351;RPB=0.170843;SGB=35.4339;VDB=0.0120933;EFF=SPLICE_SITE_REGION(LOW||||1360|LOC_Os05g16270|protein_coding|CODING|LOC_Os05g16270.1|2|1),INTRON(MODIFIER||||1360|LOC_Os05g16270|protein_coding|CODING|LOC_Os05g16270.1|2|1) FN3670-S.SNP.5:9212103 chr05:009212103 0 W/9212103-9212103 FN3670-S SNP A -> T AC=2;AN=190;BQB=0.996917;DP=2987;DP4=1366,1482,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.49759e-14;MQSB=0.203614;RPB=0.996454;SGB=112.85;VDB=0.550581;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y207*|1360|LOC_Os05g16270|protein_coding|CODING|LOC_Os05g16270.1|1|1);LOF=(LOC_Os05g16270|LOC_Os05g16270|1|1.00);NMD=(LOC_Os05g16270|LOC_Os05g16270|1|1.00) FN3404-S.SNP.5:9214132 chr05:009214132 0 W/9214132-9214132 FN3404-S SNP A -> C AC=2;AN=184;BQB=0.823871;DP=2956;DP4=1534,1199,7,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02543e-09;MQSB=0.922634;RPB=0.376471;SGB=-13.6704;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.5:9217832 chr05:009217832 0 W/9217832-9217832 FN3886-S SNP G -> T AC=1;AN=158;BQB=0.89355;DP=2810;DP4=1204,1523,5,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.96923e-12;MQSB=0.784703;RPB=0.978145;SGB=77.6532;VDB=0.525933;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I368|640|LOC_Os05g16280|protein_coding|CODING|LOC_Os05g16280.1|6|1) FN3538-S.SNP.5:9224093 chr05:009224093 0 W/9224093-9224093 FN3538-S SNP C -> G AC=1;AN=188;BQB=0.965588;DP=2928;DP4=1751,1130,10,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.66816e-07;MQSB=0.985471;RPB=0.663321;SGB=44.4357;VDB=0.569574;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D673H|686|LOC_Os05g16290|protein_coding|CODING|LOC_Os05g16290.1|6|1) FN3509-S.SNP.5:9228230 chr05:009228230 0 W/9228230-9228230 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.993896;DP=2870;DP4=1566,1230,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08455e-06;MQSB=0.975367;RPB=0.608642;SGB=25.3545;VDB=0.726254;EFF=INTRON(MODIFIER||||686|LOC_Os05g16290|protein_coding|CODING|LOC_Os05g16290.1|2|1) FN239-S.SNP.5:9230362 chr05:009230362 0 W/9230362-9230362 FN239-S Single Base Substitution T-C INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2628-S.SNP.5:9230924 chr05:009230924 0 W/9230924-9230924 FN2628-S SNP C -> A AC=1;AN=200;BQB=0.93858;DP=4556;DP4=2186,2090,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28748e-13;MQSB=0.987839;RPB=0.862182;SGB=42.5108;VDB=0.996791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.5:9236744 chr05:009236744 0 W/9236744-9236744 FN3768-S SNP G -> C AC=1;AN=190;BQB=0.288516;DP=2747;DP4=1182,1464,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0786312;MQB=0.655118;MQSB=0;RPB=0.903883;SGB=39.6545;VDB=0.841368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.5:9242142 chr05:009242142 0 W/9242142-9242142 FN3615-S SNP T -> C AC=1;AN=190;BQB=0.356448;DP=2991;DP4=1186,1464,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.395e-08;MQSB=0.969837;RPB=0.821273;SGB=-58.8731;VDB=0.716566;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.5:9242225 chr05:009242225 0 W/9242225-9242225 FN2312 SNP G -> A AC=1;AN=192;BQB=0.983707;DP=4714;DP4=1952,2491,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.07641e-06;MQSB=0.981686;RPB=0.227964;SGB=16.0922;VDB=0.0229551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.5:9243718 chr05:009243718 0 W/9243718-9243718 FN1123-S Single Base Substitution G-C INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1501-S.SNP.5:9258123 chr05:009258123 0 W/9258123-9258123 FN1501-S Single Base Substitution G-A INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1434-S.SNP.5:9268416 chr05:009268416 0 W/9268416-9268416 FN1434-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g16370 retrotransposon protein, putative, unclassified, expressed SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2235-S.SNP.5:9271925 chr05:009271925 0 W/9271925-9271925 FN2235-S SNP A -> T AC=1;AN=190;BQB=0.599238;DP=4634;DP4=2605,1680,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98616e-15;MQSB=0.748925;RPB=0.690751;SGB=85.8548;VDB=0.642851;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.5:9274459 chr05:009274459 0 W/9274459-9274459 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3825-S.SNP.5:9275450 chr05:009275450 0 W/9275450-9275450 FN3825-S SNP T -> C AC=1;AN=190;BQB=0.72756;DP=3269;DP4=1487,1529,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0137657;MQB=0.00485657;MQSB=0.00251536;RPB=0.884971;SGB=1.00337;VDB=0.179577;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.5:9276527 chr05:009276527 0 W/9276527-9276527 FN4189-S SNP T -> A AC=1;AN=170;BQB=0.999937;DP=3209;DP4=1878,1207,17,5;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0495481;MQB=0.500698;MQSB=0;RPB=0.868484;SGB=92.2986;VDB=0.427333;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.5:9277545 chr05:009277545 0 W/9277545-9277545 FN4175-S SNP C -> A AC=1;AN=170;BQB=0.986587;DP=2246;DP4=1108,1076,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.19241e-06;MQSB=0.797253;RPB=0.745422;SGB=56.7575;VDB=0.923033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.5:9282873 chr05:009282873 0 W/9282873-9282873 FN2768-S SNP T -> A AC=1;AN=198;BQB=0.761221;DP=4000;DP4=1605,2095,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00375;MQB=2.98612e-07;MQSB=0.964233;RPB=0.904059;SGB=54.5295;VDB=0.480018;EFF=INTRON(MODIFIER||||1594|LOC_Os05g16390|protein_coding|CODING|LOC_Os05g16390.1|2|1) FN2440.SNP.5:9285883 chr05:009285883 0 W/9285883-9285883 FN2440 SNP C -> A AC=2;AN=200;BQB=0.701754;DP=4509;DP4=2147,2126,22,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.07626e-27;MQSB=0.00391337;RPB=0.734177;SGB=247.682;VDB=0.5612;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.5:9294754 chr05:009294754 0 W/9294754-9294754 FN_807-3-1 Single Base Substitution A-G Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1436-S.SNP.5:9294840 chr05:009294840 0 W/9294840-9294840 FN1436-S Single Base Substitution G-T INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2612-S.SNP.5:9296080 chr05:009296080 0 W/9296080-9296080 FN2612-S SNP A -> G AC=1;AN=198;BQB=0.460349;DP=4010;DP4=1905,1884,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000249377;MQB=4.6699e-14;MQSB=0.962311;RPB=0.11189;SGB=109.285;VDB=0.332673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.5:9301111 chr05:009301111 0 W/9301111-9301111 FN3659-S SNP T -> C AC=1;AN=190;BQB=0.985352;DP=2651;DP4=1133,1441,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0622407;MQB=0.786766;MQSB=2.33466e-22;RPB=0.348888;SGB=53.6492;VDB=0.870661;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S293G|516|LOC_Os05g16400|protein_coding|CODING|LOC_Os05g16400.1|8|1) FN2729-S.SNP.5:9301646 chr05:009301646 0 W/9301646-9301646 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.883665;DP=5038;DP4=2377,2448,7,7;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0635173;MQB=0.90606;MQSB=0;RPB=0.595515;SGB=21.6694;VDB=0.209247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A211S|516|LOC_Os05g16400|protein_coding|CODING|LOC_Os05g16400.1|6|1) FN2286.SNP.5:9303574 chr05:009303574 0 W/9303574-9303574 FN2286 SNP T -> C AC=2;AN=192;BQB=0.481304;DP=4685;DP4=2054,2373,24,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.53463e-21;MQSB=0.0960984;RPB=0.878179;SGB=93.0226;VDB=0.985712;EFF=INTRON(MODIFIER||||516|LOC_Os05g16400|protein_coding|CODING|LOC_Os05g16400.1|1|1) FN-136.SNP.5:9308182 chr05:009308182 0 W/9308182-9308182 FN-136 Single Base Substitution G-A INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN755-S.SNP.5:9308734 chr05:009308734 0 W/9308734-9308734 FN755-S Single Base Substitution G-A INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1446-S.SNP.5:9313269 chr05:009313269 0 W/9313269-9313269 FN1446-S Single Base Substitution G-T INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1742-S.SNP.5:9313388 chr05:009313388 0 W/9313388-9313388 FN1742-S SNP C -> G AC=1;AN=188;BQB=0.880266;DP=2269;DP4=916,1312,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.9174e-07;MQSB=0.950228;RPB=0.521037;SGB=15.903;VDB=0.0325454;EFF=INTRON(MODIFIER||||458|LOC_Os05g16410|protein_coding|CODING|LOC_Os05g16410.1|1|1) FN3815-S.SNP.5:9323130 chr05:009323130 0 W/9323130-9323130 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.952044;DP=2662;DP4=1269,1295,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.8942e-06;MQSB=0.998802;RPB=0.998939;SGB=35.4339;VDB=0.270411;EFF=INTRON(MODIFIER||||843|LOC_Os05g16430|protein_coding|CODING|LOC_Os05g16430.1|1|1) FN4177-S.SNP.5:9327368 chr05:009327368 0 W/9327368-9327368 FN4177-S SNP A -> G AC=1;AN=170;BQB=0.931157;DP=2387;DP4=1230,1080,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.85178e-06;MQSB=0.990346;RPB=0.994888;SGB=27.9928;VDB=0.528324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I642V|843|LOC_Os05g16430|protein_coding|CODING|LOC_Os05g16430.1|15|1) FN1426-S.SNP.5:9327800 chr05:009327800 0 W/9327800-9327800 FN1426-S Single Base Substitution T-A INTRON HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1304-S.SNP.5:9329780 chr05:009329780 0 W/9329780-9329780 FN1304-S Single Base Substitution T-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN3946-S.SNP.5:9335012 chr05:009335012 0 W/9335012-9335012 FN3946-S SNP G -> A AC=1;AN=168;BQB=0.891223;DP=2512;DP4=1202,1238,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.16731e-07;MQSB=0.495344;RPB=0.0943558;SGB=41.6096;VDB=0.291385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.5:9337660 chr05:009337660 0 W/9337660-9337660 FN3398-S SNP C -> A AC=1;AN=184;BQB=0.996142;DP=2636;DP4=1558,891,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.33839e-05;MQSB=1.26395e-12;RPB=0.998008;SGB=39.699;VDB=0.0830571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.5:9344531 chr05:009344531 0 W/9344531-9344531 FN1212-S Single Base Substitution T-G INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2185-S.SNP.5:9348377 chr05:009348377 0 W/9348377-9348377 FN2185-S SNP A -> T AC=1;AN=190;BQB=0.987258;DP=5150;DP4=2457,2432,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.673e-08;MQSB=0.101233;RPB=0.888639;SGB=39.6545;VDB=0.803469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.5:9352790 chr05:009352790 0 W/9352790-9352790 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2218-S.SNP.5:9354726 chr05:009354726 0 W/9354726-9354726 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.0648246;DP=3959;DP4=1947,1773,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.95122e-10;MQSB=0.508004;RPB=0.850815;SGB=68.0854;VDB=0.860353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V211F|371|LOC_Os05g16480|protein_coding|CODING|LOC_Os05g16480.1|2|1) FN924-S.SNP.5:9358372 chr05:009358372 0 W/9358372-9358372 FN924-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g16490 expressed protein SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN1565-S.SNP.5:9361426 chr05:009361426 0 W/9361426-9361426 FN1565-S Single Base Substitution A-T INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN3849-S.SNP.5:9361477 chr05:009361477 0 W/9361477-9361477 FN3849-S SNP T -> C AC=1;AN=158;BQB=0.857317;DP=2366;DP4=1254,1046,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.82931e-09;MQSB=0.665852;RPB=0.796037;SGB=50.9207;VDB=0.883344;EFF=INTRON(MODIFIER||||806|LOC_Os05g16500|protein_coding|CODING|LOC_Os05g16500.1|1|1) FN-311.SNP.5:9362693 chr05:009362693 0 W/9362693-9362693 FN-311 Single Base Substitution G-A INTRON HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2446.SNP.5:9365059 chr05:009365059 0 W/9365059-9365059 FN2446 SNP G -> T AC=1;AN=200;BQB=0.807601;DP=4164;DP4=2251,1625,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30479e-13;MQSB=0.999734;RPB=0.946961;SGB=-9.47921;VDB=0.920237;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W676L|806|LOC_Os05g16500|protein_coding|CODING|LOC_Os05g16500.1|10|1) FN3694-S.SNP.5:9365337 chr05:009365337 0 W/9365337-9365337 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.968243;DP=2834;DP4=1216,1514,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50191e-07;MQSB=0.987669;RPB=0.102514;SGB=44.5415;VDB=0.30635;EFF=INTRON(MODIFIER||||806|LOC_Os05g16500|protein_coding|CODING|LOC_Os05g16500.1|10|1) FN3691-S.SNP.5:9367389 chr05:009367389 0 W/9367389-9367389 FN3691-S SNP A -> G AC=1;AN=190;BQB=0.975938;DP=2987;DP4=1437,1448,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68713e-10;MQSB=0.626835;RPB=0.960963;SGB=10.3266;VDB=0.693833;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.5:9371269 chr05:009371269 0 W/9371269-9371269 FN494-S Single Base Substitution C-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN931-S.SNP.5:9371318 chr05:009371318 0 W/9371318-9371318 FN931-S Single Base Substitution C-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2540-S.SNP.5:9376747 chr05:009376747 0 W/9376747-9376747 FN2540-S SNP T -> A AC=1;AN=198;BQB=0.803854;DP=4165;DP4=2147,1714,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.53978e-10;MQSB=0.972933;RPB=0.271338;SGB=54.5295;VDB=0.485724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.5:9379719 chr05:009379719 0 W/9379719-9379719 FN3360-S SNP C -> G AC=1;AN=184;BQB=0.999957;DP=3465;DP4=1195,2116,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.8755e-13;MQSB=0.0573523;RPB=0.114723;SGB=78.0093;VDB=0.350209;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.5:9380481 chr05:009380481 0 W/9380481-9380481 FN-183 Single Base Substitution G-A INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3543-S.SNP.5:9395810 chr05:009395810 0 W/9395810-9395810 FN3543-S SNP C -> T AC=1;AN=188;BQB=0.321328;DP=3663;DP4=1482,1955,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.22516e-06;MQSB=0.992314;RPB=0.678593;SGB=46.6141;VDB=0.60711;EFF=INTRON(MODIFIER||||350|LOC_Os05g16570|protein_coding|CODING|LOC_Os05g16570.1|1|1) FN684-S.SNP.5:9396070 chr05:009396070 0 W/9396070-9396070 FN684-S Single Base Substitution G-T INTRON HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1240-S.SNP.5:9407666 chr05:009407666 0 W/9407666-9407666 FN1240-S Single Base Substitution A-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3723-S.SNP.5:9408122 chr05:009408122 0 W/9408122-9408122 FN3723-S SNP T -> G AC=1;AN=190;BQB=0.503359;DP=2605;DP4=1137,1334,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.159309;MQB=0.784504;MQSB=0.769821;RPB=0.794103;SGB=23.6597;VDB=0.978831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.5:9417364 chr05:009417364 0 W/9417364-9417364 FN2387 SNP C -> T AC=1;AN=192;BQB=0.946433;DP=4219;DP4=2061,1924,21,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.0061626;MQB=4.62812e-14;MQSB=0.63861;RPB=0.795182;SGB=121.76;VDB=0.73148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.5:9420248 chr05:009420248 0 W/9420248-9420248 FN2407 SNP G -> A AC=1;AN=200;BQB=0.523965;DP=4240;DP4=2138,1944,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235849;MQB=7.84514e-09;MQSB=0.217684;RPB=0.361406;SGB=63.4749;VDB=0.388119;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N809|982|LOC_Os05g16620|protein_coding|CODING|LOC_Os05g16620.1|5|1) FN2790-S.SNP.5:9424646 chr05:009424646 0 W/9424646-9424646 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.0637786;DP=3762;DP4=1568,1831,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000531632;MQB=7.56485e-07;MQSB=0.975568;RPB=0.998326;SGB=43.7442;VDB=0.985832;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.5:9445913 chr05:009445913 0 W/9445913-9445913 FN-336 Single Base Substitution C-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2683-S.SNP.5:9456321 chr05:009456321 0 W/9456321-9456321 FN2683-S SNP A -> T AC=2;AN=200;BQB=0.964182;DP=4837;DP4=2481,2124,33,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.60025e-30;MQSB=0.928004;RPB=0.516097;SGB=233.866;VDB=0.882853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.5:9457002 chr05:009457002 0 W/9457002-9457002 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.654063;DP=4880;DP4=1623,2429,17,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54371e-09;MQSB=0.37993;RPB=0.735465;SGB=-229.631;VDB=0.447827;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.5:9457208 chr05:009457208 0 W/9457208-9457208 FN3475-S SNP G -> T AC=2;AN=182;BQB=0.853788;DP=2468;DP4=1206,1133,16,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.50928e-21;MQSB=0.947032;RPB=0.837772;SGB=78.7544;VDB=0.983239;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.5:9458275 chr05:009458275 0 W/9458275-9458275 FN993-S Single Base Substitution C-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN1264-S.SNP.5:9458535 chr05:009458535 0 W/9458535-9458535 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1264-S.SNP.5:9458536 chr05:009458536 0 W/9458536-9458536 FN1264-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1725-S.SNP.5:9464224 chr05:009464224 0 W/9464224-9464224 FN1725-S SNP T -> A AC=1;AN=188;BQB=0.625408;DP=3995;DP4=1867,2049,13,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.54414e-16;MQSB=0.993944;RPB=0.889114;SGB=28.6876;VDB=0.0957555;EFF=INTRON(MODIFIER||||409|LOC_Os05g16670|protein_coding|CODING|LOC_Os05g16670.2|1|1) FN1725-S.SNP.5:9464225 chr05:009464225 0 W/9464225-9464225 FN1725-S SNP T -> A AC=1;AN=188;BQB=0.0223432;DP=3987;DP4=1864,2044,12,23;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99622e-15;MQSB=0.978785;RPB=0.982276;SGB=-162.829;VDB=0.0681541;EFF=INTRON(MODIFIER||||409|LOC_Os05g16670|protein_coding|CODING|LOC_Os05g16670.2|1|1) FN1725-S.SNP.5:9464667 chr05:009464667 0 W/9464667-9464667 FN1725-S SNP A -> T AC=1;AN=188;BQB=0.842797;DP=3935;DP4=2094,1793,17,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30992e-11;MQSB=0.873526;RPB=0.874038;SGB=-38.7347;VDB=0.383527;EFF=INTRON(MODIFIER||||409|LOC_Os05g16670|protein_coding|CODING|LOC_Os05g16670.2|1|1) FN1485-S.SNP.5:9466846 chr05:009466846 0 W/9466846-9466846 FN1485-S Single Base Substitution G-A INTRON Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2498.SNP.5:9470733 chr05:009470733 0 W/9470733-9470733 FN2498 SNP T -> A AC=1;AN=200;BQB=0.849573;DP=4934;DP4=2149,2482,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35387e-16;MQSB=0.999306;RPB=0.260335;SGB=141.763;VDB=0.444903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V392E|409|LOC_Os05g16670|protein_coding|CODING|LOC_Os05g16670.2|15|1) FN2381.SNP.5:9480055 chr05:009480055 0 W/9480055-9480055 FN2381 SNP C -> T AC=1;AN=192;BQB=0.804334;DP=4803;DP4=2116,2293,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.58343e-14;MQSB=0.0037495;RPB=0.432666;SGB=-73.1147;VDB=0.523268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.5:9480056 chr05:009480056 0 W/9480056-9480056 FN2381 SNP T -> A AC=1;AN=192;BQB=0.670211;DP=4809;DP4=2195,2281,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.7036e-11;MQSB=0.00291684;RPB=0.879296;SGB=16.7409;VDB=0.156935;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.5:9495058 chr05:009495058 0 W/9495058-9495058 FN911-S Single Base Substitution G-A INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN-114.SNP.5:9499772 chr05:009499772 0 W/9499772-9499772 FN-114 Single Base Substitution C-A INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1290-S.SNP.5:9499985 chr05:009499985 0 W/9499985-9499985 FN1290-S Single Base Substitution A-G INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN948-S.SNP.5:9505843 chr05:009505843 0 W/9505843-9505843 FN948-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN948-S.SNP.5:9505844 chr05:009505844 0 W/9505844-9505844 FN948-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN942-S.SNP.5:9506932 chr05:009506932 0 W/9506932-9506932 FN942-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN1228-S.SNP.5:9515308 chr05:009515308 0 W/9515308-9515308 FN1228-S Single Base Substitution G-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN710-S.SNP.5:9528190 chr05:009528190 0 W/9528190-9528190 FN710-S Single Base Substitution T-A INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN3853-S.SNP.5:9533266 chr05:009533266 0 W/9533266-9533266 FN3853-S SNP C -> T AC=1;AN=158;BQB=0.806293;DP=2372;DP4=1425,854,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000254288;MQSB=0.589675;RPB=0.0586728;SGB=38.3284;VDB=0.0654841;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.5:9534741 chr05:009534741 0 W/9534741-9534741 FN-129 Single Base Substitution G-C INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN936-S.SNP.5:9536354 chr05:009536354 0 W/9536354-9536354 FN936-S Single Base Substitution G-C INTERGENIC HOMO SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN-129.SNP.5:9536460 chr05:009536460 0 W/9536460-9536460 FN-129 Single Base Substitution G-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1573-S.SNP.5:9539907 chr05:009539907 0 W/9539907-9539907 FN1573-S Single Base Substitution G-C INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1022-S.SNP.5:9547274 chr05:009547274 0 W/9547274-9547274 FN1022-S Single Base Substitution T-C INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3864-S.SNP.5:9548115 chr05:009548115 0 W/9548115-9548115 FN3864-S SNP G -> A AC=1;AN=158;BQB=0.726073;DP=2405;DP4=1051,1225,15,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0149688;MQB=7.44661e-07;MQSB=0.0927464;RPB=0.737625;SGB=45.1437;VDB=0.705988;EFF=INTRON(MODIFIER||||271|LOC_Os05g16770|protein_coding|CODING|LOC_Os05g16770.1|2|1) FN995-S.SNP.5:9549230 chr05:009549230 0 W/9549230-9549230 FN995-S Single Base Substitution A-T INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN703-S.SNP.5:9550566 chr05:009550566 0 W/9550566-9550566 FN703-S Single Base Substitution A-G INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2412.SNP.5:9551436 chr05:009551436 0 W/9551436-9551436 FN2412 SNP G -> A AC=1;AN=200;BQB=0.930226;DP=4477;DP4=1906,2305,6,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0690194;MQB=0.0408895;MQSB=1.08008e-05;RPB=0.960776;SGB=58.8698;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.5:9553608 chr05:009553608 0 W/9553608-9553608 FN2496 SNP T -> C AC=2;AN=200;BQB=0.25257;DP=4765;DP4=2383,1776,19,25;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00209864;MQB=9.03781e-09;MQSB=3.05137e-10;RPB=0.617578;SGB=51.2243;VDB=0.134883;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S188G|327|LOC_Os05g16780|protein_coding|CODING|LOC_Os05g16780.1|4|1) FN920-S.SNP.5:9553608 chr05:009553608 0 W/9553608-9553608 FN920-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g16780 retrotransposon protein, putative, unclassified, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3553-S.SNP.5:9553747 chr05:009553747 0 W/9553747-9553747 FN3553-S SNP T -> A AC=2;AN=188;BQB=0.195766;DP=3860;DP4=1965,1766,20,22;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00777202;MQB=0.693524;MQSB=0.552883;RPB=0.812943;SGB=138.74;VDB=0.777542;EFF=INTRON(MODIFIER||||327|LOC_Os05g16780|protein_coding|CODING|LOC_Os05g16780.1|3|1) FN2195-S.SNP.5:9561466 chr05:009561466 0 W/9561466-9561466 FN2195-S SNP T -> A AC=2;AN=190;BQB=0.0837012;DP=4217;DP4=1838,1820,12,10;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00379417;MQB=0.0114869;MQSB=0.0223868;RPB=0.925947;SGB=-64.6575;VDB=0.508616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S522T|1802|LOC_Os05g16790|protein_coding|CODING|LOC_Os05g16790.1|3|1) FN2420.SNP.5:9565292 chr05:009565292 0 W/9565292-9565292 FN2420 SNP G -> C AC=1;AN=200;BQB=0.979332;DP=7131;DP4=3796,2875,16,20;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.246529;MQB=0.000264263;MQSB=0.0614741;RPB=0.982955;SGB=160.183;VDB=0.27248;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cCg|R1797P|1802|LOC_Os05g16790|protein_coding|CODING|LOC_Os05g16790.1|3|1) FN3861-S.SNP.5:9569196 chr05:009569196 0 W/9569196-9569196 FN3861-S SNP G -> A AC=2;AN=158;BQB=0.852418;DP=2438;DP4=954,1370,8,4;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00123052;MQB=9.97781e-06;MQSB=0.427542;RPB=0.964678;SGB=47.0672;VDB=0.44694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T794I|962|LOC_Os05g16800|protein_coding|CODING|LOC_Os05g16800.1|7|1) FN2257-S.SNP.5:9569402 chr05:009569402 0 W/9569402-9569402 FN2257-S SNP G -> A AC=1;AN=190;BQB=0.0822151;DP=3499;DP4=1722,1285,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000285796;MQB=2.39045e-12;MQSB=0.975013;RPB=0.0330147;SGB=89.4087;VDB=0.112456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S755F|962|LOC_Os05g16800|protein_coding|CODING|LOC_Os05g16800.1|6|1) FN2734-S.SNP.5:9570569 chr05:009570569 0 W/9570569-9570569 FN2734-S SNP C -> G AC=1;AN=200;BQB=0.323881;DP=5937;DP4=2845,2751,16,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00774802;MQB=4.2477e-06;MQSB=0.999792;RPB=0.780036;SGB=52.9314;VDB=0.00560722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G571A|962|LOC_Os05g16800|protein_coding|CODING|LOC_Os05g16800.1|5|1) FN2662-S.SNP.5:9577412 chr05:009577412 0 W/9577412-9577412 FN2662-S SNP T -> C AC=1;AN=200;BQB=0.769317;DP=4456;DP4=1741,2341,5,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000448833;MQB=5.11732e-06;MQSB=0.53634;RPB=0.983005;SGB=-0.141083;VDB=0.0591826;EFF=INTRON(MODIFIER||||541|LOC_Os05g16810|protein_coding|CODING|LOC_Os05g16810.1|1|1) FN3447-S.SNP.5:9580094 chr05:009580094 0 W/9580094-9580094 FN3447-S SNP G -> A AC=1;AN=182;BQB=0.888229;DP=2608;DP4=1008,1503,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.8385e-05;MQSB=0.668221;RPB=0.662445;SGB=30.6558;VDB=0.244443;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.5:9580772 chr05:009580772 0 W/9580772-9580772 FN-181 Single Base Substitution G-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. W463-2-1.SNP.5:9580956 chr05:009580956 0 W/9580956-9580956 W463-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2290.SNP.5:9582616 chr05:009582616 0 W/9582616-9582616 FN2290 SNP A -> G AC=1;AN=192;BQB=0.935155;DP=5179;DP4=2631,2220,19,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.67735e-22;MQSB=0.999926;RPB=0.894408;SGB=85.3296;VDB=0.189442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.5:9584201 chr05:009584201 0 W/9584201-9584201 FN1739-S SNP A -> T AC=1;AN=188;BQB=0.421518;DP=3242;DP4=1779,1424,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26618e-10;MQSB=0.305227;RPB=0.663894;SGB=-10.1101;VDB=0.356668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:9584360 chr05:009584360 0 W/9584360-9584360 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.926288;DP=4849;DP4=2135,2546,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.95936e-15;MQSB=0.869116;RPB=0.507035;SGB=104.921;VDB=0.1674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.5:9587482 chr05:009587482 0 W/9587482-9587482 FN3708-S SNP A -> T AC=2;AN=190;BQB=0.465007;DP=3103;DP4=1620,1357,12,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5703e-14;MQSB=0.999882;RPB=0.232624;SGB=64.5217;VDB=0.782441;EFF=INTRON(MODIFIER||||870|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.3|1|1),INTRON(MODIFIER||||1010|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.1|1|1),INTRON(MODIFIER||||972|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.2|1|1),INTRON(MODIFIER||||846|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.4|1|1),INTRON(MODIFIER||||135|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.5|1|1) FN863-S.SNP.5:9588499 chr05:009588499 0 W/9588499-9588499 FN863-S Single Base Substitution C-A INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN-80.SNP.5:9592911 chr05:009592911 0 W/9592911-9592911 FN-80 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g16824 SHR5-receptor-like kinase, putative, expressed SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN4203-S.SNP.5:9593788 chr05:009593788 0 W/9593788-9593788 FN4203-S SNP T -> A AC=1;AN=170;BQB=0.924989;DP=2781;DP4=1432,1281,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.08053e-07;MQSB=0.981009;RPB=0.380045;SGB=38.987;VDB=0.221848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S679R|1010|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.1|20|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S641R|972|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.2|19|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S539R|870|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.3|19|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S515R|846|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.4|19|1) FN4174-S.SNP.5:9594769 chr05:009594769 0 W/9594769-9594769 FN4174-S SNP C -> T AC=1;AN=170;BQB=0.934177;DP=2713;DP4=1327,1299,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.50663e-11;MQSB=0.998407;RPB=0.860953;SGB=32.0972;VDB=0.226361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R887W|1010|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.1|23|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R849W|972|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.2|22|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R747W|870|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.3|22|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R723W|846|LOC_Os05g16824|protein_coding|CODING|LOC_Os05g16824.4|22|1) FN2682-S.SNP.5:9618704 chr05:009618704 0 W/9618704-9618704 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.696241;DP=4898;DP4=2223,2410,6,5;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0202123;MQB=0.991052;MQSB=5.92146e-07;RPB=0.471221;SGB=29.4541;VDB=0.477182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R117W|449|LOC_Os05g16880|protein_coding|CODING|LOC_Os05g16880.1|1|1) FN2609-S.SNP.5:9618821 chr05:009618821 0 W/9618821-9618821 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.999646;DP=3935;DP4=1809,1928,14,23;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.66467e-16;MQSB=0.00206983;RPB=0.71817;SGB=122.837;VDB=0.940673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R156W|449|LOC_Os05g16880|protein_coding|CODING|LOC_Os05g16880.1|1|1) FN916-S.SNP.5:9635884 chr05:009635884 0 W/9635884-9635884 FN916-S Single Base Substitution A-T INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3909-S.SNP.5:9644989 chr05:009644989 0 W/9644989-9644989 FN3909-S SNP C -> T AC=2;AN=158;BQB=0.308847;DP=2588;DP4=1479,943,23,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.6456e-14;MQSB=0.747505;RPB=0.313623;SGB=61.7299;VDB=0.894346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.5:9645834 chr05:009645834 0 W/9645834-9645834 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.467192;DP=3481;DP4=1488,1794,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000861821;MQB=0.000201326;MQSB=7.39695e-20;RPB=0.635242;SGB=71.8647;VDB=0.194974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.5:9647727 chr05:009647727 0 W/9647727-9647727 FN3909-S SNP C -> T AC=2;AN=158;BQB=0.957159;DP=2728;DP4=1294,1277,13,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.6386e-19;MQSB=0.993317;RPB=0.954141;SGB=64.0993;VDB=0.00293893;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.5:9653319 chr05:009653319 0 W/9653319-9653319 FN-175 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN4177-S.SNP.5:9655784 chr05:009655784 0 W/9655784-9655784 FN4177-S SNP G -> T AC=1;AN=170;BQB=0.704424;DP=2373;DP4=1150,1154,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.13533e-09;MQSB=0.999754;RPB=0.924542;SGB=56.7575;VDB=0.871548;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.5:9662277 chr05:009662277 0 W/9662277-9662277 FN-409 Single Base Substitution C-T INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN409-S.SNP.5:9662277 chr05:009662277 0 W/9662277-9662277 FN409-S Single Base Substitution C-T INTRON HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2612-S.SNP.5:9664113 chr05:009664113 0 W/9664113-9664113 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.918266;DP=5147;DP4=2931,1983,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.136584;MQB=0.76545;MQSB=0;RPB=0.126133;SGB=43.7442;VDB=0.337982;EFF=INTRON(MODIFIER||||677|LOC_Os05g16950|protein_coding|CODING|LOC_Os05g16950.1|1|1) FN2432.SNP.5:9669943 chr05:009669943 0 W/9669943-9669943 FN2432 SNP C -> G AC=1;AN=200;BQB=0.663419;DP=7892;DP4=4305,3137,13,7;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0272428;MQB=0.955888;MQSB=0.21914;RPB=0.829937;SGB=12.7003;VDB=0.662764;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L904F|1818|LOC_Os05g16960|protein_coding|CODING|LOC_Os05g16960.1|3|1) FN1114-S.SNP.5:9676319 chr05:009676319 0 W/9676319-9676319 FN1114-S Single Base Substitution G-T INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2351.SNP.5:9677599 chr05:009677599 0 W/9677599-9677599 FN2351 SNP C -> T AC=1;AN=192;BQB=0.459282;DP=7268;DP4=3356,3398,21,10;HOB=5.42535e-05;ICB=0.000109072;MQ=11;MQ0F=0.531783;MQB=0.00269841;MQSB=1.06045e-12;RPB=0.424519;SGB=-41.8626;VDB=0.947709;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.5:9678586 chr05:009678586 0 W/9678586-9678586 FN3294-S SNP G -> T AC=2;AN=184;BQB=0.73144;DP=2776;DP4=1089,1588,18,23;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0.130764;MQB=0.161462;MQSB=0;RPB=0.214039;SGB=179.874;VDB=0.0624651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.5:9679524 chr05:009679524 0 W/9679524-9679524 FN1527-S Single Base Substitution A-T INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN440-S.SNP.5:9679525 chr05:009679525 0 W/9679525-9679525 FN440-S Single Base Substitution C-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2353.SNP.5:9682597 chr05:009682597 0 W/9682597-9682597 FN2353 SNP T -> A AC=2;AN=192;BQB=0.914309;DP=4482;DP4=2015,2086,12,16;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.00981705;MQB=6.66058e-05;MQSB=0.402234;RPB=0.316441;SGB=24.5626;VDB=0.768703;EFF=UTR_5_PRIME(MODIFIER||273||607|LOC_Os05g16970|protein_coding|CODING|LOC_Os05g16970.1|1|1) FN-148.SNP.5:9684195 chr05:009684195 0 W/9684195-9684195 FN-148 Single Base Substitution C-T INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN955-S.SNP.5:9684657 chr05:009684657 0 W/9684657-9684657 FN955-S Single Base Substitution G-A INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-56.SNP.5:9684861 chr05:009684861 0 W/9684861-9684861 FN-56 Single Base Substitution C-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-56.SNP.5:9684862 chr05:009684862 0 W/9684862-9684862 FN-56 Single Base Substitution C-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-176.SNP.5:9686563 chr05:009686563 0 W/9686563-9686563 FN-176 Single Base Substitution T-G INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN-75.SNP.5:9689990 chr05:009689990 0 W/9689990-9689990 FN-75 Single Base Substitution T-A INTERGENIC HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN75-S-S.SNP.5:9689990 chr05:009689990 0 W/9689990-9689990 FN75-S-S SNP T -> A AC=1;AN=190;BQB=0.619261;DP=4944;DP4=2269,2283,30,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.58332e-29;MQSB=0.960735;RPB=0.996494;SGB=120.707;VDB=0.296271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.5:9692606 chr05:009692606 0 W/9692606-9692606 FN2579-S SNP G -> A AC=2;AN=198;BQB=0.550467;DP=4501;DP4=1841,2241,31,35;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.32534e-31;MQSB=0.605991;RPB=0.996445;SGB=179.347;VDB=0.832378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.5:9707274 chr05:009707274 0 W/9707274-9707274 FN1039-S Single Base Substitution G-T INTRON HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2690-S.SNP.5:9714345 chr05:009714345 0 W/9714345-9714345 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.331159;DP=4987;DP4=2324,2427,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200521;MQB=4.21328e-11;MQSB=0.995498;RPB=0.201692;SGB=72.6852;VDB=0.265338;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.5:9719604 chr05:009719604 0 W/9719604-9719604 FN459-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN459-S.SNP.5:9719606 chr05:009719606 0 W/9719606-9719606 FN459-S Single Base Substitution G-T STOP_GAINED HET LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN2651-S.SNP.5:9721661 chr05:009721661 0 W/9721661-9721661 FN2651-S SNP T -> C AC=1;AN=200;BQB=0.979879;DP=4939;DP4=2540,2067,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84229e-13;MQSB=0.9808;RPB=0.879383;SGB=20.7261;VDB=0.469158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.5:9723526 chr05:009723526 0 W/9723526-9723526 FN1073-S Single Base Substitution C-A INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. 703-1.SNP.5:9725667 chr05:009725667 0 W/9725667-9725667 703-1 Single Base Substitution A-G INTRON Homo SNo: 1450, Mutant_ID: 703-1, Generation: M2, Mutations: 30, Genes: 28, Seed availability: No. FN242-S.SNP.5:9736845 chr05:009736845 0 W/9736845-9736845 FN242-S Single Base Substitution G-C INTRON HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2085-S.SNP.5:9737278 chr05:009737278 0 W/9737278-9737278 FN2085-S SNP T -> G AC=2;AN=168;BQB=0.991922;DP=4050;DP4=1895,2076,31,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4215e-31;MQSB=0.979988;RPB=0.409642;SGB=-63.9798;VDB=0.172451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Gta|L2257V|2732|LOC_Os05g17050|protein_coding|CODING|LOC_Os05g17050.1|24|1) FN3282-S.SNP.5:9740318 chr05:009740318 0 W/9740318-9740318 FN3282-S SNP C -> G AC=1;AN=184;BQB=0.858007;DP=3357;DP4=1874,1352,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.73283e-11;MQSB=0.99207;RPB=0.999292;SGB=40.9276;VDB=0.574207;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P2589R|2732|LOC_Os05g17050|protein_coding|CODING|LOC_Os05g17050.1|30|1) FN4126-S.SNP.5:9740849 chr05:009740849 0 W/9740849-9740849 FN4126-S SNP G -> A AC=1;AN=182;BQB=0.971417;DP=2967;DP4=1263,1628,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000101238;MQSB=0.859612;RPB=0.119177;SGB=21.5845;VDB=0.0312269;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.5:9741571 chr05:009741571 0 W/9741571-9741571 FN3855-S SNP C -> A AC=1;AN=158;BQB=0.44474;DP=2639;DP4=1233,1288,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000206169;MQSB=0.941611;RPB=0.887181;SGB=23.9652;VDB=0.651537;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.5:9743899 chr05:009743899 0 W/9743899-9743899 FN-304 Single Base Substitution G-T INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-304.SNP.5:9743900 chr05:009743900 0 W/9743900-9743900 FN-304 Single Base Substitution A-T INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1031-S.SNP.5:9758195 chr05:009758195 0 W/9758195-9758195 FN1031-S Single Base Substitution T-G INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-393.SNP.5:9774499 chr05:009774499 0 W/9774499-9774499 FN-393 Single Base Substitution C-T INTRON HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1693-S.SNP.5:9776752 chr05:009776752 0 W/9776752-9776752 FN1693-S SNP G -> A AC=2;AN=188;BQB=0.703299;DP=3186;DP4=1796,1352,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.39303e-10;MQSB=0.989679;RPB=0.936492;SGB=33.7061;VDB=0.569804;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||446|LOC_Os05g17110|protein_coding|CODING|LOC_Os05g17110.1|5|1),INTRON(MODIFIER||||446|LOC_Os05g17110|protein_coding|CODING|LOC_Os05g17110.1|4|1);LOF=(LOC_Os05g17110|LOC_Os05g17110|1|1.00) FN475-S.SNP.5:9779045 chr05:009779045 0 W/9779045-9779045 FN475-S Single Base Substitution C-T INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN_N1-26-1.SNP.5:9783060 chr05:009783060 0 W/9783060-9783060 FN_N1-26-1 Single Base Substitution G-A HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1476-S.SNP.5:9784246 chr05:009784246 0 W/9784246-9784246 FN1476-S Single Base Substitution T-C INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3471-S.SNP.5:9788842 chr05:009788842 0 W/9788842-9788842 FN3471-S SNP T -> A AC=2;AN=184;BQB=0.999829;DP=2953;DP4=1411,1407,14,1;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000677277;MQB=8.27288e-09;MQSB=0.86502;RPB=0.179286;SGB=23.2751;VDB=0.280825;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T942|2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|4|1) FN3471-S.SNP.5:9788843 chr05:009788843 0 W/9788843-9788843 FN3471-S SNP T -> A AC=2;AN=184;BQB=0.879848;DP=2948;DP4=1399,1419,15,2;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000678426;MQB=7.99418e-09;MQSB=0.899063;RPB=0.630814;SGB=-14.714;VDB=0.634609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L943I|2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|4|1) FN2175-S.SNP.5:9790463 chr05:009790463 0 W/9790463-9790463 FN2175-S SNP G -> A AC=2;AN=168;BQB=0.0224053;DP=3080;DP4=1384,1635,15,18;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00746753;MQB=7.8426e-07;MQSB=0.00603065;RPB=0.581854;SGB=-121.185;VDB=0.0677917;EFF=INTRON(MODIFIER||||2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|4|1) FN2245-S.SNP.5:9794579 chr05:009794579 0 W/9794579-9794579 FN2245-S SNP C -> G AC=1;AN=190;BQB=0.878578;DP=5642;DP4=2860,2384,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000177242;MQB=1.06987e-11;MQSB=0.991426;RPB=0.158646;SGB=44.0907;VDB=0.827251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A1677G|2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|10|1),SPLICE_SITE_REGION(LOW||||2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|10|1) FN2283.SNP.5:9795742 chr05:009795742 0 W/9795742-9795742 FN2283 SNP T -> C AC=1;AN=192;BQB=0.371936;DP=4979;DP4=2331,2230,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.87757e-17;MQSB=0.986689;RPB=0.913386;SGB=33.9487;VDB=0.567823;EFF=INTRON(MODIFIER||||2048|LOC_Os05g17120|protein_coding|CODING|LOC_Os05g17120.1|10|1) FN3444-S.SNP.5:9803224 chr05:009803224 0 W/9803224-9803224 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.971394;DP=2739;DP4=1276,1392,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.022636;MQB=0.435459;MQSB=0.00147639;RPB=0.916683;SGB=25.1826;VDB=0.414348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R410H|609|LOC_Os05g17130|protein_coding|CODING|LOC_Os05g17130.1|2|1) FN2575-S.SNP.5:9805000 chr05:009805000 0 W/9805000-9805000 FN2575-S SNP A -> T AC=1;AN=198;BQB=0.846429;DP=4386;DP4=2141,2008,32,22;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0145919;MQB=0.984519;MQSB=3.81179e-12;RPB=0.866255;SGB=8.18366;VDB=0.324494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.5:9805000 chr05:009805000 0 W/9805000-9805000 FN3383-S SNP A -> T AC=2;AN=184;BQB=0.537214;DP=3879;DP4=1696,1751,19,30;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0.0309358;MQB=0.740769;MQSB=3.83957e-12;RPB=0.961093;SGB=-319.115;VDB=0.992629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.5:9810205 chr05:009810205 0 W/9810205-9810205 FN2321 SNP G -> A AC=1;AN=192;BQB=0.993927;DP=4662;DP4=2222,2159,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0002145;MQB=5.56076e-14;MQSB=0.899282;RPB=0.987138;SGB=19.8696;VDB=0.137935;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L496|1271|LOC_Os05g17140|protein_coding|CODING|LOC_Os05g17140.1|5|1) FN1047-S.SNP.5:9810536 chr05:009810536 0 W/9810536-9810536 FN1047-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g17140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1434-S.SNP.5:9821212 chr05:009821212 0 W/9821212-9821212 FN1434-S Single Base Substitution G-T INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-278.SNP.5:9823778 chr05:009823778 0 W/9823778-9823778 FN-278 Single Base Substitution C-T INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3531-S.SNP.5:9824846 chr05:009824846 0 W/9824846-9824846 FN3531-S SNP C -> T AC=1;AN=188;BQB=0.964578;DP=2813;DP4=1285,1438,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.27973e-06;MQSB=0.828396;RPB=0.293644;SGB=21.8113;VDB=0.349492;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R524*|628|LOC_Os05g17150|protein_coding|CODING|LOC_Os05g17150.1|6|1) FN-180.SNP.5:9828863 chr05:009828863 0 W/9828863-9828863 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN1533-S.SNP.5:9829249 chr05:009829249 0 W/9829249-9829249 FN1533-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os05g17160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN2428.SNP.5:9830025 chr05:009830025 0 W/9830025-9830025 FN2428 SNP C -> T AC=1;AN=200;BQB=0.997443;DP=4371;DP4=2084,2064,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11236e-09;MQSB=0.999341;RPB=0.780174;SGB=63.4749;VDB=0.738171;EFF=INTRON(MODIFIER||||489|LOC_Os05g17160|protein_coding|CODING|LOC_Os05g17160.1|2|1) FN3823-S.SNP.5:9830123 chr05:009830123 0 W/9830123-9830123 FN3823-S SNP G -> T AC=1;AN=190;BQB=0.915247;DP=2708;DP4=1390,1232,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.30931e-10;MQSB=0.989385;RPB=0.679375;SGB=43.2083;VDB=0.395459;EFF=INTRON(MODIFIER||||489|LOC_Os05g17160|protein_coding|CODING|LOC_Os05g17160.1|2|1) FN3282-S.SNP.5:9835546 chr05:009835546 0 W/9835546-9835546 FN3282-S SNP T -> C AC=1;AN=184;BQB=0.710403;DP=2856;DP4=1450,1272,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.46116e-05;MQSB=4.85571e-09;RPB=0.9508;SGB=20.7533;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.5:9836368 chr05:009836368 0 W/9836368-9836368 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.968503;DP=3564;DP4=1779,1745,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32986e-12;MQSB=0.96811;RPB=0.999977;SGB=-13.2184;VDB=0.3431;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.5:9837120 chr05:009837120 0 W/9837120-9837120 FN454-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g17170 retrotransposon protein, putative, unclassified, expressed SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN4206-S.SNP.5:9838833 chr05:009838833 0 W/9838833-9838833 FN4206-S SNP A -> G AC=1;AN=170;BQB=0.981396;DP=2513;DP4=1314,1103,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.06665e-06;MQSB=0.973933;RPB=0.999282;SGB=7.67082;VDB=0.397591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.5:9841537 chr05:009841537 0 W/9841537-9841537 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.875716;DP=3724;DP4=1607,1918,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000537057;MQB=4.34806e-12;MQSB=0.955173;RPB=0.799199;SGB=86.3098;VDB=0.950423;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L344|1017|LOC_Os05g17180|protein_coding|CODING|LOC_Os05g17180.1|1|1) FN3698-S.SNP.5:9844278 chr05:009844278 0 W/9844278-9844278 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.95576;DP=2192;DP4=1113,928,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00174894;MQSB=0.372398;RPB=0.171187;SGB=25.439;VDB=0.169441;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 FN-182 Single Base Substitution C-T INTERGENIC HOMO SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN1170-S.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 FN1170-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1273-S.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 FN1273-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN848-S.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 FN848-S Single Base Substitution C-T INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN861-S.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 FN861-S Single Base Substitution C-T INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. W470-2-1.SNP.5:9847410 chr05:009847410 0 W/9847410-9847410 W470-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1134-S.SNP.5:9848444 chr05:009848444 0 W/9848444-9848444 FN1134-S Single Base Substitution G-A INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2670-S.SNP.5:9860920 chr05:009860920 0 W/9860920-9860920 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.509647;DP=3164;DP4=1632,1298,15,8;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.022756;MQB=0.426392;MQSB=0;RPB=0.97405;SGB=100.316;VDB=0.868464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.5:9877655 chr05:009877655 0 W/9877655-9877655 FN1440-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2640-S.SNP.5:9878295 chr05:009878295 0 W/9878295-9878295 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.999104;DP=4889;DP4=2355,2289,7,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00674985;MQB=4.40873e-06;MQSB=0.0348395;RPB=0.981749;SGB=45.0543;VDB=0.552188;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K516|1826|LOC_Os05g17260|protein_coding|CODING|LOC_Os05g17260.1|3|1) FN3691-S.SNP.5:9879851 chr05:009879851 0 W/9879851-9879851 FN3691-S SNP C -> T AC=1;AN=190;BQB=0.823324;DP=4193;DP4=1806,2250,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.10756;MQB=0.244646;MQSB=0.000977715;RPB=0.899755;SGB=60.9777;VDB=0.901139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R86H|1826|LOC_Os05g17260|protein_coding|CODING|LOC_Os05g17260.1|2|1) FN2795-S.SNP.5:9881393 chr05:009881393 0 W/9881393-9881393 FN2795-S SNP A -> T AC=1;AN=198;BQB=0.964755;DP=4641;DP4=2154,2286,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0215471;MQB=7.63174e-05;MQSB=7.43161e-17;RPB=0.553742;SGB=34.5346;VDB=0.215869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.5:9881394 chr05:009881394 0 W/9881394-9881394 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.994468;DP=4651;DP4=2156,2267,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0242958;MQB=0.000187548;MQSB=4.05072e-16;RPB=0.639632;SGB=67.9293;VDB=0.155665;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.5:9884443 chr05:009884443 0 W/9884443-9884443 FN1072-S Single Base Substitution G-T INTRON HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2665-S.SNP.5:9885112 chr05:009885112 0 W/9885112-9885112 FN2665-S SNP C -> G AC=1;AN=200;BQB=0.952355;DP=4591;DP4=2069,2285,11,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000653452;MQB=2.3104e-06;MQSB=0.0954991;RPB=0.995974;SGB=26.8797;VDB=0.213967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T133R|1611|LOC_Os05g17270|protein_coding|CODING|LOC_Os05g17270.1|3|1) FN2211-S.SNP.5:9888667 chr05:009888667 0 W/9888667-9888667 FN2211-S SNP T -> C AC=1;AN=190;BQB=0.877011;DP=5393;DP4=2598,2376,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0292972;MQB=1.48858e-06;MQSB=2.02747e-06;RPB=0.615131;SGB=64.5316;VDB=0.287821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y1147H|1611|LOC_Os05g17270|protein_coding|CODING|LOC_Os05g17270.1|6|1) FN3393-S.SNP.5:9888852 chr05:009888852 0 W/9888852-9888852 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.997323;DP=5507;DP4=2534,2827,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.15562;MQB=0.87429;MQSB=0;RPB=0.990452;SGB=42.7914;VDB=0.639928;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R1208|1611|LOC_Os05g17270|protein_coding|CODING|LOC_Os05g17270.1|6|1) FN389-S.SNP.5:9890937 chr05:009890937 0 W/9890937-9890937 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN4068-S.SNP.5:9892674 chr05:009892674 0 W/9892674-9892674 FN4068-S SNP G -> C AC=1;AN=182;BQB=0.906131;DP=3130;DP4=1386,1642,10,11;HOB=6.03792e-05;ICB=0.000121422;MQ=27;MQ0F=0.111182;MQB=0.367933;MQSB=0;RPB=0.00786374;SGB=89.2199;VDB=0.369384;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.5:9894278 chr05:009894278 0 W/9894278-9894278 FN678-S Single Base Substitution T-A INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN901-S.SNP.5:9894496 chr05:009894496 0 W/9894496-9894496 FN901-S Single Base Substitution G-A INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3856-S.SNP.5:9902966 chr05:009902966 0 W/9902966-9902966 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.958945;DP=2464;DP4=1279,1119,6,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.38397e-05;MQSB=0.498279;RPB=0.627124;SGB=29.5899;VDB=0.49048;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R28|371|LOC_Os05g17280|protein_coding|CODING|LOC_Os05g17280.1|1|1) FN3674-S.SNP.5:9903366 chr05:009903366 0 W/9903366-9903366 FN3674-S SNP A -> T AC=1;AN=190;BQB=0.962141;DP=2786;DP4=1272,1421,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00323044;MQB=5.21953e-07;MQSB=0.957265;RPB=0.730359;SGB=49.0954;VDB=0.0782672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.5:9909004 chr05:009909004 0 W/9909004-9909004 FN4275-S SNP G -> A AC=1;AN=170;BQB=0.990305;DP=2412;DP4=1170,1171,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00248756;MQB=0.000243851;MQSB=0.979984;RPB=0.856068;SGB=25.6601;VDB=0.743816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.5:9909008 chr05:009909008 0 W/9909008-9909008 FN3496-S SNP C -> G AC=1;AN=188;BQB=0.99168;DP=2855;DP4=1561,1234,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00175131;MQB=1.29407e-07;MQSB=0.757019;RPB=0.845607;SGB=53.5223;VDB=0.620104;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.5:9910233 chr05:009910233 0 W/9910233-9910233 FN1490-S Single Base Substitution C-T INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2626-S.SNP.5:9910512 chr05:009910512 0 W/9910512-9910512 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.615803;DP=5075;DP4=2435,2352,7,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00591133;MQB=0.00589128;MQSB=2.37251e-28;RPB=0.67624;SGB=24.2746;VDB=0.993101;EFF=INTERGENIC(MODIFIER||||||||||1) FN-112.SNP.5:9911327 chr05:009911327 0 W/9911327-9911327 FN-112 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1133-S.SNP.5:9911578 chr05:009911578 0 W/9911578-9911578 FN1133-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17300 expressed protein SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1476-S.SNP.5:9913659 chr05:009913659 0 W/9913659-9913659 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2768-S.SNP.5:9914183 chr05:009914183 0 W/9914183-9914183 FN2768-S SNP G -> A AC=2;AN=198;BQB=0.40743;DP=3756;DP4=1871,1646,30,16;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0111821;MQB=1.18698e-09;MQSB=2.69649e-22;RPB=0.403069;SGB=54.0128;VDB=0.882183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.5:9914183 chr05:009914183 0 W/9914183-9914183 FN3489-S SNP G -> A AC=1;AN=184;BQB=0.196213;DP=3622;DP4=1959,1478,18,10;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00911099;MQB=0.00133978;MQSB=0.00216491;RPB=0.911065;SGB=88.5747;VDB=0.757208;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.5:9914183 chr05:009914183 0 W/9914183-9914183 FN4075-S SNP G -> A AC=2;AN=182;BQB=0.056389;DP=2775;DP4=1293,1339,10,20;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0.0133333;MQB=2.11306e-05;MQSB=0.000880244;RPB=0.994032;SGB=60.807;VDB=0.827143;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.5:9914183 chr05:009914183 0 W/9914183-9914183 FN982-S Single Base Substitution G-A INTERGENIC HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN1304-S.SNP.5:9922401 chr05:009922401 0 W/9922401-9922401 FN1304-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1730-S.SNP.5:9926923 chr05:009926923 0 W/9926923-9926923 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.987019;DP=1969;DP4=1014,909,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.228035;MQB=0.916938;MQSB=8.75982e-05;RPB=0.568818;SGB=36.2493;VDB=0.202191;EFF=INTRON(MODIFIER||||1792|LOC_Os05g17320|protein_coding|CODING|LOC_Os05g17320.1|1|1) FN2479.SNP.5:9928927 chr05:009928927 0 W/9928927-9928927 FN2479 SNP A -> G AC=1;AN=200;BQB=0.735468;DP=2348;DP4=1107,513,14,0;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00170358;MQB=0.0342997;MQSB=1.59864e-36;RPB=0.000880173;SGB=-52.7312;VDB=0.136513;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.5:9929712 chr05:009929712 0 W/9929712-9929712 FN3506-S SNP A -> G AC=1;AN=188;BQB=0.506994;DP=3763;DP4=1866,1785,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.248206;MQB=0.329092;MQSB=1.49163e-34;RPB=0.994143;SGB=67.8739;VDB=0.00466499;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.5:9935179 chr05:009935179 0 W/9935179-9935179 FN624-S Single Base Substitution C-T INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN1270-S.SNP.5:9936315 chr05:009936315 0 W/9936315-9936315 FN1270-S Single Base Substitution A-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2185-S.SNP.5:9965518 chr05:009965518 0 W/9965518-9965518 FN2185-S SNP A -> G AC=1;AN=190;BQB=0.968023;DP=5567;DP4=2720,2400,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0386204;MQB=0.092303;MQSB=2.5824e-14;RPB=0.559622;SGB=39.6545;VDB=0.271404;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D55|254|LOC_Os05g17370|protein_coding|CODING|LOC_Os05g17370.1|2|1) FN1200-S.SNP.5:9966649 chr05:009966649 0 W/9966649-9966649 FN1200-S Single Base Substitution G-A INTRON HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-190.SNP.5:9969467 chr05:009969467 0 W/9969467-9969467 FN-190 Single Base Substitution G-C INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1103-S.SNP.5:9971806 chr05:009971806 0 W/9971806-9971806 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-203.SNP.5:9985113 chr05:009985113 0 W/9985113-9985113 FN-203 Single Base Substitution G-A INTRON HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN2629-S.SNP.5:9986904 chr05:009986904 0 W/9986904-9986904 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.517199;DP=5020;DP4=2368,2410,11,15;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0109562;MQB=0.0767932;MQSB=0.583893;RPB=0.391495;SGB=83.5316;VDB=0.0466366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.5:9989085 chr05:009989085 0 W/9989085-9989085 FN2729-S SNP G -> T AC=1;AN=200;BQB=0.689913;DP=4541;DP4=2001,2227,6,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0504294;MQB=0.0122906;MQSB=2.00413e-13;RPB=0.942101;SGB=49.6594;VDB=0.656235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.5:9992039 chr05:009992039 0 W/9992039-9992039 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.74789;DP=4126;DP4=1566,2443,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.1127;MQB=0.721784;MQSB=0;RPB=0.825547;SGB=66.8296;VDB=0.492772;EFF=INTRON(MODIFIER||||1805|LOC_Os05g17410|protein_coding|CODING|LOC_Os05g17410.1|1|1) FN4143-S.SNP.5:9994742 chr05:009994742 0 W/9994742-9994742 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.992936;DP=2940;DP4=1522,1347,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.10102;MQB=0.768542;MQSB=1.10895e-35;RPB=0.58694;SGB=61.2001;VDB=0.976813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P693L|1805|LOC_Os05g17410|protein_coding|CODING|LOC_Os05g17410.1|4|1) FN2085-S.SNP.5:9997702 chr05:009997702 0 W/9997702-9997702 FN2085-S SNP G -> A AC=1;AN=168;BQB=0.621265;DP=3884;DP4=1957,1850,20,19;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.191813;MQB=0.00912291;MQSB=1.08907e-24;RPB=0.891874;SGB=80.5243;VDB=0.955817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1680T|1805|LOC_Os05g17410|protein_coding|CODING|LOC_Os05g17410.1|4|1) FN3560-S.SNP.5:10001035 chr05:010001035 0 W/10001035-10001035 FN3560-S SNP C -> T AC=1;AN=188;BQB=0.969464;DP=2939;DP4=1562,1319,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.0888057;MQB=0.991507;MQSB=0;RPB=0.564784;SGB=58.0655;VDB=0.011404;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.5:10001411 chr05:010001411 0 W/10001411-10001411 FN949-S Single Base Substitution T-G INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2639-S.SNP.5:10001609 chr05:010001609 0 W/10001609-10001609 FN2639-S SNP G -> C AC=1;AN=200;BQB=0.894332;DP=4693;DP4=1815,2576,14,20;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0543362;MQB=0.158493;MQSB=2.93629e-37;RPB=0.514058;SGB=150.973;VDB=0.730474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.5:10006890 chr05:010006890 0 W/10006890-10006890 FN2312 SNP A -> G AC=1;AN=192;BQB=0.915647;DP=7655;DP4=2490,4335,18,23;HOB=5.42535e-05;ICB=0.000109072;MQ=18;MQ0F=0.382887;MQB=0.157486;MQSB=0;RPB=0.997938;SGB=-182.896;VDB=0.196002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V204A|294|LOC_Os05g17430|protein_coding|CODING|LOC_Os05g17430.1|2|1) FN1179-S.SNP.5:10008919 chr05:010008919 0 W/10008919-10008919 FN1179-S Single Base Substitution C-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2338.SNP.5:10009212 chr05:010009212 0 W/10009212-10009212 FN2338 SNP A -> T AC=1;AN=192;BQB=0.928776;DP=5252;DP4=2697,2273,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0209444;MQB=0.060831;MQSB=2.52578e-19;RPB=0.996311;SGB=90.2896;VDB=0.183258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.5:10012536 chr05:010012536 0 W/10012536-10012536 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.996615;DP=3531;DP4=2040,1385,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25963e-05;MQSB=0.0907561;RPB=0.0186523;SGB=13.188;VDB=0.00071589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.5:10013203 chr05:010013203 0 W/10013203-10013203 FN2245-S SNP T -> A AC=1;AN=190;BQB=0.0346941;DP=4265;DP4=2340,1492,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.00468933;MQB=0.910531;MQSB=1.91519e-16;RPB=0.999168;SGB=36.1006;VDB=0.103065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|L12Q|74|LOC_Os05g17440|protein_coding|CODING|LOC_Os05g17440.1|1|1) FN3528-S.SNP.5:10013871 chr05:010013871 0 W/10013871-10013871 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.747678;DP=2887;DP4=1138,1615,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.103914;MQB=0.00234494;MQSB=2.4237e-37;RPB=0.750536;SGB=50.1574;VDB=0.630073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.5:10020309 chr05:010020309 0 W/10020309-10020309 FN3956-S SNP A -> G AC=1;AN=168;BQB=0.910238;DP=5289;DP4=2538,2550,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.002647;MQB=1.80658e-07;MQSB=0.106731;RPB=0.458739;SGB=38.1788;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.5:10037400 chr05:010037400 0 W/10037400-10037400 FN3432-S SNP C -> T AC=2;AN=184;BQB=0.786032;DP=2818;DP4=1289,1427,15,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000354862;MQB=8.09066e-17;MQSB=0.86943;RPB=0.613982;SGB=76.2326;VDB=0.995748;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R223H|1400|LOC_Os05g17470|protein_coding|CODING|LOC_Os05g17470.1|1|1) FN788-S.SNP.5:10037400 chr05:010037400 0 W/10037400-10037400 FN788-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN-411.SNP.5:10037426 chr05:010037426 0 W/10037426-10037426 FN-411 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1322-S.SNP.5:10037615 chr05:010037615 0 W/10037615-10037615 FN1322-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN2487.SNP.5:10057985 chr05:010057985 0 W/10057985-10057985 FN2487 SNP G -> T AC=1;AN=200;BQB=0.419931;DP=4301;DP4=1950,2041,11,8;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0195303;MQB=0.0203094;MQSB=1.39658e-27;RPB=0.673291;SGB=58.2954;VDB=0.627504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Agt|R207S|279|LOC_Os05g17520|protein_coding|CODING|LOC_Os05g17520.1|2|1) FN430-S.SNP.5:10062839 chr05:010062839 0 W/10062839-10062839 FN430-S Single Base Substitution G-A INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1024-S.SNP.5:10063255 chr05:010063255 0 W/10063255-10063255 FN1024-S Single Base Substitution C-G INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-327.SNP.5:10064991 chr05:010064991 0 W/10064991-10064991 FN-327 Single Base Substitution G-A INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN933-S.SNP.5:10066605 chr05:010066605 0 W/10066605-10066605 FN933-S Single Base Substitution A-T INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-179.SNP.5:10072670 chr05:010072670 0 W/10072670-10072670 FN-179 Single Base Substitution C-T INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-386.SNP.5:10075010 chr05:010075010 0 W/10075010-10075010 FN-386 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN-234.SNP.5:10081935 chr05:010081935 0 W/10081935-10081935 FN-234 Single Base Substitution C-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2453.SNP.5:10082451 chr05:010082451 0 W/10082451-10082451 FN2453 SNP G -> C AC=1;AN=200;BQB=0.968249;DP=2791;DP4=1190,1299,5,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00537442;MQB=1.70622e-05;MQSB=0.463465;RPB=0.972653;SGB=58.8698;VDB=0.0662295;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.5:10087598 chr05:010087598 0 W/10087598-10087598 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN1262-S.SNP.5:10091870 chr05:010091870 0 W/10091870-10091870 FN1262-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2558-S.SNP.5:10099712 chr05:010099712 0 W/10099712-10099712 FN2558-S SNP G -> C AC=2;AN=198;BQB=0.999965;DP=4267;DP4=1857,2179,25,14;HOB=0.019998;ICB=0.495001;MQ=25;MQ0F=0.230841;MQB=0.0500058;MQSB=0;RPB=0.803916;SGB=86.437;VDB=0.400333;EFF=INTRON(MODIFIER||||497|LOC_Os05g17580|protein_coding|CODING|LOC_Os05g17580.1|1|1) FN3526-S.SNP.5:10104235 chr05:010104235 0 W/10104235-10104235 FN3526-S SNP C -> G AC=2;AN=188;BQB=0.999804;DP=2644;DP4=1235,1281,10,10;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0347958;MQB=0.181008;MQSB=7.7362e-21;RPB=0.585279;SGB=85.3253;VDB=0.0991324;EFF=INTRON(MODIFIER||||179|LOC_Os05g17590|protein_coding|CODING|LOC_Os05g17590.1|1|1) FN3970-S.SNP.5:10108394 chr05:010108394 0 W/10108394-10108394 FN3970-S SNP C -> T AC=1;AN=168;BQB=0.888107;DP=3462;DP4=1609,1712,6,21;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0765454;MQB=0.404283;MQSB=0;RPB=0.93262;SGB=19.9297;VDB=0.65081;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.5:10110227 chr05:010110227 0 W/10110227-10110227 FN-102 Single Base Substitution G-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN701-S.SNP.5:10110812 chr05:010110812 0 W/10110812-10110812 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1753-S.SNP.5:10116206 chr05:010116206 0 W/10116206-10116206 FN1753-S SNP A -> G AC=1;AN=188;BQB=0.570238;DP=3468;DP4=1660,1764,18,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.25561e-13;MQSB=0.99991;RPB=0.177217;SGB=-8.48022;VDB=0.222118;EFF=INTRON(MODIFIER||||1017|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.1|9|1),INTRON(MODIFIER||||869|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.3|8|1),INTRON(MODIFIER||||885|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.2|7|1),INTRON(MODIFIER||||687|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.4|7|1),INTRON(MODIFIER||||621|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.5|7|1),INTRON(MODIFIER||||621|LOC_Os05g17604|protein_coding|CODING|LOC_Os05g17604.6|7|1) FN1072-S.SNP.5:10128862 chr05:010128862 0 W/10128862-10128862 FN1072-S Single Base Substitution T-C INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1175-S.SNP.5:10128886 chr05:010128886 0 W/10128886-10128886 FN1175-S Single Base Substitution T-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3459-S.SNP.5:10129601 chr05:010129601 0 W/10129601-10129601 FN3459-S SNP C -> T AC=1;AN=184;BQB=0.997457;DP=2745;DP4=1349,1316,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.76829e-07;MQSB=0.864386;RPB=0.945518;SGB=13.188;VDB=0.547427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.5:10130084 chr05:010130084 0 W/10130084-10130084 FN2485 SNP C -> T AC=2;AN=200;BQB=0.804709;DP=4357;DP4=2194,1869,19,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.70916e-14;MQSB=0.999173;RPB=0.854202;SGB=127.947;VDB=0.59202;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.5:10132355 chr05:010132355 0 W/10132355-10132355 FN551-S Single Base Substitution A-T INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN737-S.SNP.5:10136522 chr05:010136522 0 W/10136522-10136522 FN737-S Single Base Substitution A-T INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN389-S.SNP.5:10137944 chr05:010137944 0 W/10137944-10137944 FN389-S Single Base Substitution C-G INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1136-S.SNP.5:10138787 chr05:010138787 0 W/10138787-10138787 FN1136-S Single Base Substitution C-G INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN806-S.SNP.5:10142686 chr05:010142686 0 W/10142686-10142686 FN806-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN2234-S.SNP.5:10142896 chr05:010142896 0 W/10142896-10142896 FN2234-S SNP T -> C AC=1;AN=190;BQB=0.998794;DP=5572;DP4=2585,2483,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.043252;MQB=0.548571;MQSB=1.70471e-16;RPB=0.56037;SGB=1.00337;VDB=0.931286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D1523G|1710|LOC_Os05g17630|protein_coding|CODING|LOC_Os05g17630.1|3|1) FN903-S.SNP.5:10148581 chr05:010148581 0 W/10148581-10148581 FN903-S Single Base Substitution C-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN542-S.SNP.5:10150226 chr05:010150226 0 W/10150226-10150226 FN542-S Single Base Substitution G-A INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2555-S.SNP.5:10155631 chr05:010155631 0 W/10155631-10155631 FN2555-S SNP A -> T AC=1;AN=198;BQB=0.680694;DP=3886;DP4=1914,1681,5,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00308801;MQB=6.9739e-14;MQSB=0.225194;RPB=0.73935;SGB=68.91;VDB=0.452775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R619S|910|LOC_Os05g17640|protein_coding|CODING|LOC_Os05g17640.1|3|1) FN2555-S.SNP.5:10155632 chr05:010155632 0 W/10155632-10155632 FN2555-S SNP G -> A AC=1;AN=198;BQB=0.101576;DP=3864;DP4=1891,1786,6,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00284679;MQB=9.95272e-13;MQSB=0.111626;RPB=0.911067;SGB=68.91;VDB=0.333592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A620T|910|LOC_Os05g17640|protein_coding|CODING|LOC_Os05g17640.1|3|1) FN2555-S.SNP.5:10155633 chr05:010155633 0 W/10155633-10155633 FN2555-S SNP C -> T AC=1;AN=198;BQB=0.918959;DP=3857;DP4=1916,1777,5,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00285196;MQB=1.61055e-13;MQSB=0.202845;RPB=0.979917;SGB=90.9049;VDB=0.377545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A620V|910|LOC_Os05g17640|protein_coding|CODING|LOC_Os05g17640.1|3|1) FN-370.SNP.5:10156217 chr05:010156217 0 W/10156217-10156217 FN-370 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g17640 retrotransposon protein, putative, unclassified, expressed SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-241.SNP.5:10157220 chr05:010157220 0 W/10157220-10157220 FN-241 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17650 retrotransposon protein, putative, unclassified, expressed SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1624-S.SNP.5:10158833 chr05:010158833 0 W/10158833-10158833 FN1624-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g17650 retrotransposon protein, putative, unclassified, expressed SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN-364.SNP.5:10162649 chr05:010162649 0 W/10162649-10162649 FN-364 Single Base Substitution C-T INTERGENIC HOMO SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN373-S.SNP.5:10163049 chr05:010163049 0 W/10163049-10163049 FN373-S Single Base Substitution A-G INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2558-S.SNP.5:10164883 chr05:010164883 0 W/10164883-10164883 FN2558-S SNP C -> G AC=1;AN=198;BQB=0.388313;DP=4044;DP4=1775,2003,9,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.6346e-16;MQSB=0.819801;RPB=0.813654;SGB=63.0809;VDB=0.209043;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.5:10166310 chr05:010166310 0 W/10166310-10166310 FN2666-S SNP A -> T AC=2;AN=200;BQB=0.264711;DP=4589;DP4=2376,1948,18,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00087165;MQB=7.59651e-18;MQSB=0.881773;RPB=0.723856;SGB=115.978;VDB=0.0755427;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.5:10168348 chr05:010168348 0 W/10168348-10168348 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2455.SNP.5:10175405 chr05:010175405 0 W/10175405-10175405 FN2455 SNP T -> A AC=1;AN=200;BQB=0.856993;DP=5250;DP4=2389,2478,6,5;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0933333;MQB=0.786263;MQSB=0.97411;RPB=0.704937;SGB=13.8539;VDB=0.206418;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.5:10179232 chr05:010179232 0 W/10179232-10179232 FN4088-S SNP A -> G AC=2;AN=182;BQB=0.970149;DP=3166;DP4=1476,1521,20,12;HOB=0.0217365;ICB=0.494567;MQ=25;MQ0F=0.160139;MQB=0.991826;MQSB=3.77296e-15;RPB=0.762655;SGB=65.8287;VDB=0.981212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S56P|119|LOC_Os05g17690|protein_coding|CODING|LOC_Os05g17690.1|1|1) FN4249-S.SNP.5:10182477 chr05:010182477 0 W/10182477-10182477 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.983406;DP=3177;DP4=1495,1615,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0541391;MQB=0.00382498;MQSB=0.41277;RPB=0.389908;SGB=56.7575;VDB=0.559121;EFF=INTRON(MODIFIER||||497|LOC_Os05g17700|protein_coding|CODING|LOC_Os05g17700.1|1|1) FN2121-S.SNP.5:10184395 chr05:010184395 0 W/10184395-10184395 FN2121-S SNP G -> T AC=2;AN=168;BQB=0.999615;DP=4132;DP4=1964,2094,26,26;HOB=0.0235261;ICB=0.494119;MQ=24;MQ0F=0.286302;MQB=1.73608e-05;MQSB=3.56018e-32;RPB=0.53146;SGB=-113.574;VDB=0.961818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.5:10184414 chr05:010184414 0 W/10184414-10184414 FN3412-S SNP A -> G AC=1;AN=184;BQB=0.985316;DP=2731;DP4=1136,1504,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.127792;MQB=0.90535;MQSB=1.55287e-05;RPB=0.984147;SGB=21.6609;VDB=0.317505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.5:10189253 chr05:010189253 0 W/10189253-10189253 FN3551-S SNP A -> G AC=1;AN=188;BQB=0.576222;DP=2792;DP4=1319,1313,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00537249;MQB=0.114666;MQSB=0.101114;RPB=0.996978;SGB=-2.17824;VDB=0.539478;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.5:10190361 chr05:010190361 0 W/10190361-10190361 FN4022-S SNP C -> A AC=1;AN=168;BQB=0.936743;DP=4813;DP4=2665,1955,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0105963;MQB=0.775873;MQSB=0.290885;RPB=0.950356;SGB=75.9177;VDB=0.159567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.5:10191703 chr05:010191703 0 W/10191703-10191703 FN3964-S SNP A -> G AC=1;AN=168;BQB=0.552783;DP=3499;DP4=1746,1487,18,23;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.225207;MQB=0.0442227;MQSB=0.941491;RPB=0.999929;SGB=-5.46373;VDB=0.611537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W242R|470|LOC_Os05g17720|protein_coding|CODING|LOC_Os05g17720.1|2|1) FN2439.SNP.5:10199076 chr05:010199076 0 W/10199076-10199076 FN2439 SNP G -> A AC=2;AN=200;BQB=0.0204272;DP=3837;DP4=1903,1582,9,7;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.0013031;MQB=0.0028548;MQSB=0.0123741;RPB=0.897814;SGB=26.8797;VDB=0.485546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.5:10199251 chr05:010199251 0 W/10199251-10199251 FN3503-S SNP C -> A AC=1;AN=188;BQB=0.949983;DP=4579;DP4=2134,2361,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00349421;MQB=0.112181;MQSB=3.45458e-05;RPB=0.997001;SGB=44.4357;VDB=0.0710039;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.5:10202028 chr05:010202028 0 W/10202028-10202028 FN403-S Single Base Substitution C-T INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-135.SNP.5:10209678 chr05:010209678 0 W/10209678-10209678 FN-135 Single Base Substitution C-T INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN2580-S.SNP.5:10216598 chr05:010216598 0 W/10216598-10216598 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.436649;DP=4159;DP4=1656,2281,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000240442;MQB=9.75489e-08;MQSB=0.791837;RPB=0.999496;SGB=43.7442;VDB=0.56639;EFF=INTRON(MODIFIER||||1097|LOC_Os05g17780|protein_coding|CODING|LOC_Os05g17780.1|1|1) FN459-S.SNP.5:10217522 chr05:010217522 0 W/10217522-10217522 FN459-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g17780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN3569-S.SNP.5:10219489 chr05:010219489 0 W/10219489-10219489 FN3569-S SNP A -> G AC=1;AN=188;BQB=0.892373;DP=3370;DP4=1537,1691,14,21;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0160237;MQB=0.00295859;MQSB=0.000193599;RPB=0.996382;SGB=74.3988;VDB=0.315803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T902A|1097|LOC_Os05g17780|protein_coding|CODING|LOC_Os05g17780.1|6|1) FN2646-S.SNP.5:10220132 chr05:010220132 0 W/10220132-10220132 FN2646-S SNP T -> C AC=1;AN=200;BQB=0.994672;DP=4590;DP4=2343,1994,16,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00043573;MQB=2.42377e-09;MQSB=0.534642;RPB=0.505922;SGB=50.3263;VDB=0.357074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F1067L|1097|LOC_Os05g17780|protein_coding|CODING|LOC_Os05g17780.1|7|1) FN1520-S.SNP.5:10226319 chr05:010226319 0 W/10226319-10226319 FN1520-S Single Base Substitution G-A INTRON HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1481-S.SNP.5:10229119 chr05:010229119 0 W/10229119-10229119 FN1481-S Single Base Substitution T-C INTERGENIC Homo SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1755-S.SNP.5:10229119 chr05:010229119 0 W/10229119-10229119 FN1755-S SNP T -> C AC=1;AN=188;BQB=0.00776009;DP=3057;DP4=1529,1498,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.55656e-06;MQSB=0.0125237;RPB=0.454859;SGB=-63.3592;VDB=0.478732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:10229119 chr05:010229119 0 W/10229119-10229119 FN2247-S SNP T -> C AC=1;AN=188;BQB=0.242529;DP=5056;DP4=2549,2198,15,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0025712;MQB=8.59382e-10;MQSB=0.100181;RPB=0.666901;SGB=99.1879;VDB=0.507243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.5:10229119 chr05:010229119 0 W/10229119-10229119 FN3514-S SNP T -> C AC=1;AN=188;BQB=0.520925;DP=3036;DP4=1650,1255,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000658762;MQB=6.74809e-08;MQSB=0.878127;RPB=0.636426;SGB=10.1681;VDB=0.345489;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.5:10229119 chr05:010229119 0 W/10229119-10229119 FN934-S Single Base Substitution T-C INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3610-S.SNP.5:10229204 chr05:010229204 0 W/10229204-10229204 FN3610-S SNP T -> C AC=2;AN=190;BQB=0.99871;DP=2836;DP4=1385,1271,20,7;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0148096;MQB=1.49584e-07;MQSB=0.270421;RPB=0.915153;SGB=22.7576;VDB=0.127225;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.5:10231968 chr05:010231968 0 W/10231968-10231968 FN4130-S SNP C -> T AC=1;AN=182;BQB=0.692892;DP=2757;DP4=1174,1515,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000144465;MQSB=0.994631;RPB=0.99997;SGB=39.6007;VDB=0.332598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.5:10240891 chr05:010240891 0 W/10240891-10240891 FN1038-S Single Base Substitution G-A INTRON HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN3958-S.SNP.5:10242608 chr05:010242608 0 W/10242608-10242608 FN3958-S SNP T -> G AC=1;AN=168;BQB=0.211628;DP=2547;DP4=1208,1213,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.79994e-06;MQSB=0.872377;RPB=0.8882;SGB=7.05233;VDB=0.192221;EFF=INTRON(MODIFIER||||870|LOC_Os05g17810|protein_coding|CODING|LOC_Os05g17810.1|8|1) FN3395-S.SNP.5:10245185 chr05:010245185 0 W/10245185-10245185 FN3395-S SNP T -> C AC=1;AN=184;BQB=0.559324;DP=2712;DP4=1183,1377,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000368732;MQB=4.1613e-06;MQSB=0.966792;RPB=0.439999;SGB=62.3078;VDB=0.106241;EFF=INTRON(MODIFIER||||870|LOC_Os05g17810|protein_coding|CODING|LOC_Os05g17810.1|17|1) FN2473.SNP.5:10249745 chr05:010249745 0 W/10249745-10249745 FN2473 SNP A -> C AC=1;AN=200;BQB=0.872033;DP=4223;DP4=1944,1926,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.10058e-06;MQSB=0.720579;RPB=0.938383;SGB=45.0543;VDB=0.672885;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.5:10255493 chr05:010255493 0 W/10255493-10255493 FN_955-1 Single Base Substitution T-A Homo LOC_Os05g17830 retrotransposon protein, putative, unclassified, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN4122-S.SNP.5:10259527 chr05:010259527 0 W/10259527-10259527 FN4122-S SNP A -> T AC=1;AN=182;BQB=0.995164;DP=3368;DP4=1568,1713,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=14;MQ0F=0.627375;MQB=0.0602851;MQSB=0;RPB=0.734183;SGB=46.1603;VDB=0.205488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.5:10259843 chr05:010259843 0 W/10259843-10259843 FN1658-S SNP C -> G AC=2;AN=188;BQB=0.000223183;DP=3651;DP4=1747,868,227,761;HOB=0.0210502;ICB=0.494738;MQ=13;MQ0F=0.645029;MQB=0;MQSB=0;RPB=0.848557;SGB=-1449.02;VDB=0.49457;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.5:10259964 chr05:010259964 0 W/10259964-10259964 FN733-S Single Base Substitution C-A INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN2651-S.SNP.5:10262768 chr05:010262768 0 W/10262768-10262768 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.378122;DP=4697;DP4=1997,2461,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212902;MQB=5.46969e-13;MQSB=0.985305;RPB=0.902112;SGB=86.5007;VDB=0.0147072;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T157|986|LOC_Os05g17840|protein_coding|CODING|LOC_Os05g17840.1|3|1) FN1568-S.SNP.5:10263761 chr05:010263761 0 W/10263761-10263761 FN1568-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2688-S.SNP.5:10264771 chr05:010264771 0 W/10264771-10264771 FN2688-S SNP A -> C AC=1;AN=200;BQB=0.476115;DP=4364;DP4=2233,1943,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.38082e-06;MQSB=0.989097;RPB=0.822314;SGB=3.06925;VDB=0.735281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K560T|986|LOC_Os05g17840|protein_coding|CODING|LOC_Os05g17840.1|6|1) FN1409-S.SNP.5:10266186 chr05:010266186 0 W/10266186-10266186 FN1409-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2609-S.SNP.5:10272525 chr05:010272525 0 W/10272525-10272525 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.958887;DP=4066;DP4=1987,1863,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.59403e-19;MQSB=0.968538;RPB=0.654691;SGB=132.261;VDB=0.951249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H26Y|124|LOC_Os05g17860|protein_coding|CODING|LOC_Os05g17860.1|1|1) FN858-S.SNP.5:10276634 chr05:010276634 0 W/10276634-10276634 FN858-S Single Base Substitution C-A INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN536-S.SNP.5:10277337 chr05:010277337 0 W/10277337-10277337 FN536-S Single Base Substitution C-G INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN3637-S.SNP.5:10284247 chr05:010284247 0 W/10284247-10284247 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.674502;DP=2862;DP4=2038,707,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000698812;MQB=0.0353964;MQSB=3.81369e-06;RPB=0.556185;SGB=23.6597;VDB=0.320698;EFF=INTRON(MODIFIER||||583|LOC_Os05g17890|protein_coding|CODING|LOC_Os05g17890.1|1|1) FN302-S.SNP.5:10285219 chr05:010285219 0 W/10285219-10285219 FN302-S Single Base Substitution G-A INTRON HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2112-S.SNP.5:10288978 chr05:010288978 0 W/10288978-10288978 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.983801;DP=2600;DP4=1558,942,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.149231;MQB=0.37507;MQSB=0.00402001;RPB=0.896356;SGB=4.1907;VDB=0.251293;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.5:10291855 chr05:010291855 0 W/10291855-10291855 FN-250 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g17900 retrotransposon protein, putative, unclassified, expressed SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN2083-S.SNP.5:10291856 chr05:010291856 0 W/10291856-10291856 FN2083-S SNP T -> A AC=1;AN=168;BQB=0.0095453;DP=4027;DP4=1702,1981,70,228;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0702756;MQB=0;MQSB=0.746128;RPB=0.715197;SGB=-2998.68;VDB=0.0356703;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G143|371|LOC_Os05g17900|protein_coding|CODING|LOC_Os05g17900.1|1|1) FN3764-S.SNP.5:10296782 chr05:010296782 0 W/10296782-10296782 FN3764-S SNP G -> C AC=1;AN=190;BQB=0.965529;DP=3066;DP4=1607,1395,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0410959;MQB=0.99739;MQSB=2.31786e-38;RPB=0.423358;SGB=58.2031;VDB=0.868406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttG|F1135L|1152|LOC_Os05g17910|protein_coding|CODING|LOC_Os05g17910.1|4|1) FN734-S.SNP.5:10296782 chr05:010296782 0 W/10296782-10296782 FN734-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3324-S.SNP.5:10298848 chr05:010298848 0 W/10298848-10298848 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.913067;DP=3449;DP4=1379,1979,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00695854;MQB=0.000317281;MQSB=0.340418;RPB=0.767238;SGB=62.3078;VDB=0.621001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A447T|1152|LOC_Os05g17910|protein_coding|CODING|LOC_Os05g17910.1|4|1) FN736-S.SNP.5:10307184 chr05:010307184 0 W/10307184-10307184 FN736-S Single Base Substitution C-T INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2295.SNP.5:10308809 chr05:010308809 0 W/10308809-10308809 FN2295 SNP T -> C AC=1;AN=192;BQB=0.994167;DP=4473;DP4=2080,1989,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.62081e-09;MQSB=0.966946;RPB=0.999989;SGB=-14.2043;VDB=0.264024;EFF=INTRON(MODIFIER||||238|LOC_Os05g17930|protein_coding|CODING|LOC_Os05g17930.1|1|1) FN1007-S.SNP.5:10315381 chr05:010315381 0 W/10315381-10315381 FN1007-S Single Base Substitution G-A INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2089-S.SNP.5:10316301 chr05:010316301 0 W/10316301-10316301 FN2089-S SNP A -> G AC=1;AN=168;BQB=0.340412;DP=3536;DP4=1675,1822,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0489253;MQB=0.082772;MQSB=0.0350926;RPB=0.470292;SGB=-12.3568;VDB=0.921616;EFF=INTRON(MODIFIER||||117|LOC_Os05g17950|protein_coding|CODING|LOC_Os05g17950.1|1|1) FN3565-S.SNP.5:10316301 chr05:010316301 0 W/10316301-10316301 FN3565-S SNP A -> G AC=1;AN=188;BQB=0.996916;DP=2854;DP4=1298,1448,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00525578;MQB=0.000124016;MQSB=0.216503;RPB=0.980237;SGB=67.1521;VDB=0.84649;EFF=INTRON(MODIFIER||||117|LOC_Os05g17950|protein_coding|CODING|LOC_Os05g17950.1|1|1) FN3693-S.SNP.5:10328677 chr05:010328677 0 W/10328677-10328677 FN3693-S SNP C -> T AC=1;AN=190;BQB=0.974342;DP=2727;DP4=1380,1281,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00220022;MQB=0.356309;MQSB=0.171579;RPB=0.479211;SGB=39.9877;VDB=0.909421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D483N|764|LOC_Os05g17970|protein_coding|CODING|LOC_Os05g17970.1|5|1) FN2479.SNP.5:10329747 chr05:010329747 0 W/10329747-10329747 FN2479 SNP T -> C AC=1;AN=200;BQB=0.678806;DP=4805;DP4=2377,2165,14,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.012487;MQB=0.925479;MQSB=3.80646e-11;RPB=0.949964;SGB=114.132;VDB=0.928771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M237V|764|LOC_Os05g17970|protein_coding|CODING|LOC_Os05g17970.1|2|1) FN3090-S.SNP.5:10330655 chr05:010330655 0 W/10330655-10330655 FN3090-S SNP C -> A AC=2;AN=184;BQB=0.966361;DP=2842;DP4=1381,1357,14,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=4.74999e-10;MQSB=0.848287;RPB=0.962353;SGB=112.047;VDB=0.713946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.5:10330677 chr05:010330677 0 W/10330677-10330677 FN3924-S SNP G -> A AC=2;AN=158;BQB=0.990915;DP=2377;DP4=1110,1160,15,21;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=5.81802e-16;MQSB=0.402068;RPB=0.954986;SGB=71.2076;VDB=0.171101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.5:10330689 chr05:010330689 0 W/10330689-10330689 FN2584-S SNP C -> A AC=1;AN=198;BQB=0.254154;DP=3968;DP4=1914,1696,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000504032;MQB=1.04715e-11;MQSB=0.533389;RPB=0.999996;SGB=23.7055;VDB=0.831985;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.5:10331606 chr05:010331606 0 W/10331606-10331606 FN550-S Single Base Substitution C-A INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN2648-S.SNP.5:10335794 chr05:010335794 0 W/10335794-10335794 FN2648-S SNP C -> T AC=2;AN=200;BQB=0.473099;DP=4657;DP4=2320,2097,23,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.13031e-27;MQSB=0.993761;RPB=0.876118;SGB=110.245;VDB=0.0209622;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.5:10337385 chr05:010337385 0 W/10337385-10337385 FN-259 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g17990 expressed protein SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN983-S.SNP.5:10338918 chr05:010338918 0 W/10338918-10338918 FN983-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g17990 expressed protein SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1369-S.SNP.5:10340717 chr05:010340717 0 W/10340717-10340717 FN1369-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g17990 expressed protein SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2670-S.SNP.5:10345454 chr05:010345454 0 W/10345454-10345454 FN2670-S SNP A -> T AC=1;AN=200;BQB=0.457143;DP=4699;DP4=2261,2171,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79185e-20;MQSB=0.871881;RPB=0.488897;SGB=112.373;VDB=0.521437;EFF=INTRON(MODIFIER||||695|LOC_Os05g17990|protein_coding|CODING|LOC_Os05g17990.1|8|1) FN-141.SNP.5:10347914 chr05:010347914 0 W/10347914-10347914 FN-141 Single Base Substitution G-A INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN874-S.SNP.5:10350035 chr05:010350035 0 W/10350035-10350035 FN874-S Single Base Substitution A-C INTRON HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2617-S.SNP.5:10351277 chr05:010351277 0 W/10351277-10351277 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.153055;DP=4256;DP4=2057,1988,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.18404e-07;MQSB=0.899829;RPB=0.88529;SGB=86.3098;VDB=0.996909;EFF=INTRON(MODIFIER||||1169|LOC_Os05g18000|protein_coding|CODING|LOC_Os05g18000.1|5|1) FN-407.SNP.5:10359242 chr05:010359242 0 W/10359242-10359242 FN-407 Single Base Substitution A-G INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.5:10359242 chr05:010359242 0 W/10359242-10359242 FN407-S Single Base Substitution A-G INTERGENIC HOMO SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN750-S.SNP.5:10359603 chr05:010359603 0 W/10359603-10359603 FN750-S Single Base Substitution G-A INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN1461-S.SNP.5:10363450 chr05:010363450 0 W/10363450-10363450 FN1461-S Single Base Substitution G-A INTRON HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN_N1-150-1.SNP.5:10366172 chr05:010366172 0 W/10366172-10366172 FN_N1-150-1 Single Base Substitution C-A HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2680-S.SNP.5:10376563 chr05:010376563 0 W/10376563-10376563 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.472089;DP=3264;DP4=1812,1047,14,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00582108;MQB=1.68035e-06;MQSB=5.57256e-05;RPB=0.85245;SGB=127.947;VDB=0.342178;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.5:10377689 chr05:010377689 0 W/10377689-10377689 FN661-S Single Base Substitution G-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2217-S.SNP.5:10379813 chr05:010379813 0 W/10379813-10379813 FN2217-S SNP C -> A AC=1;AN=188;BQB=0.733805;DP=4937;DP4=2254,2383,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.92463e-07;MQSB=0.990503;RPB=0.98939;SGB=18.552;VDB=0.956569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.5:10379949 chr05:010379949 0 W/10379949-10379949 FN1750-S SNP G -> A AC=1;AN=188;BQB=0.0418095;DP=3413;DP4=1655,1714,14,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.4042e-11;MQSB=0.978353;RPB=0.586089;SGB=-77.9263;VDB=0.493953;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.5:10399147 chr05:010399147 0 W/10399147-10399147 FN4202-S SNP G -> A AC=2;AN=170;BQB=0.658301;DP=2436;DP4=1108,1218,25,25;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.000410509;MQB=1.25667e-16;MQSB=0.480772;RPB=0.932821;SGB=211.27;VDB=0.774023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.5:10402377 chr05:010402377 0 W/10402377-10402377 FN2441 SNP G -> T AC=1;AN=200;BQB=0.968488;DP=4469;DP4=2089,2109,12,2;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.09258e-05;MQSB=0.238947;RPB=0.854218;SGB=40.2696;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.5:10402715 chr05:010402715 0 W/10402715-10402715 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.958598;DP=2480;DP4=1359,1052,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.85659e-07;MQSB=0.967384;RPB=0.569991;SGB=38.987;VDB=0.189841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.5:10402716 chr05:010402716 0 W/10402716-10402716 FN4175-S SNP T -> C AC=1;AN=170;BQB=0.957241;DP=2489;DP4=1357,1046,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.72777e-07;MQSB=0.947894;RPB=0.561273;SGB=38.987;VDB=0.185182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.5:10413133 chr05:010413133 0 W/10413133-10413133 FN1448-S Single Base Substitution G-A INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN737-S.SNP.5:10414921 chr05:010414921 0 W/10414921-10414921 FN737-S Single Base Substitution G-T INTRON HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN895-S.SNP.5:10418057 chr05:010418057 0 W/10418057-10418057 FN895-S Single Base Substitution C-T INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1247-S.SNP.5:10420196 chr05:010420196 0 W/10420196-10420196 FN1247-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g18120 expressed protein SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN-188.SNP.5:10423712 chr05:010423712 0 W/10423712-10423712 FN-188 Single Base Substitution G-C INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1292-S.SNP.5:10424378 chr05:010424378 0 W/10424378-10424378 FN1292-S Single Base Substitution C-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3503-S.SNP.5:10428264 chr05:010428264 0 W/10428264-10428264 FN3503-S SNP A -> G AC=1;AN=188;BQB=0.9433;DP=3164;DP4=1329,1738,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00979772;MQB=0.169259;MQSB=0.410469;RPB=0.349428;SGB=35.3493;VDB=0.513454;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.5:10430129 chr05:010430129 0 W/10430129-10430129 FN-117 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN4325-S.SNP.5:10432664 chr05:010432664 0 W/10432664-10432664 FN4325-S SNP T -> A AC=1;AN=170;BQB=0.827228;DP=2620;DP4=1272,1266,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.35263e-06;MQSB=0.656879;RPB=0.977114;SGB=34.878;VDB=0.30725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.5:10433288 chr05:010433288 0 W/10433288-10433288 FN2618-S SNP C -> A AC=1;AN=198;BQB=0.363983;DP=4240;DP4=2028,1997,21,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000235849;MQB=3.01789e-22;MQSB=0.793845;RPB=0.607568;SGB=159.832;VDB=0.295665;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E128*|214|LOC_Os05g18160|protein_coding|CODING|LOC_Os05g18160.1|1|1) FN3467-S.SNP.5:10436947 chr05:010436947 0 W/10436947-10436947 FN3467-S SNP C -> T AC=1;AN=182;BQB=0.748719;DP=2777;DP4=1407,1271,4,12;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.185812;MQB=0.643845;MQSB=4.64934e-37;RPB=0.95291;SGB=46.3132;VDB=0.903988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.5:10442660 chr05:010442660 0 W/10442660-10442660 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.680699;DP=3079;DP4=1395,1535,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75766e-06;MQSB=0.970123;RPB=0.998392;SGB=46.3132;VDB=0.369587;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.5:10446800 chr05:010446800 0 W/10446800-10446800 FN1012-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g18170 retrotransposon, putative, centromere-specific, expressed SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2765-S.SNP.5:10447889 chr05:010447889 0 W/10447889-10447889 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.864356;DP=4022;DP4=1844,1961,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.75005e-11;MQSB=0.982007;RPB=0.843411;SGB=77.1196;VDB=0.326003;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D32N|466|LOC_Os05g18180|protein_coding|CODING|LOC_Os05g18180.1|1|1) FN2449.SNP.5:10452183 chr05:010452183 0 W/10452183-10452183 FN2449 SNP G -> C AC=2;AN=200;BQB=0.81328;DP=5051;DP4=2594,2165,18,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.45881e-13;MQSB=0.812002;RPB=0.781624;SGB=90.7419;VDB=0.83572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V8L|141|LOC_Os05g18190|protein_coding|CODING|LOC_Os05g18190.1|1|1) FN584-S.SNP.5:10454363 chr05:010454363 0 W/10454363-10454363 FN584-S Single Base Substitution G-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2134-S.SNP.5:10454410 chr05:010454410 0 W/10454410-10454410 FN2134-S SNP C -> T AC=2;AN=168;BQB=0.37699;DP=2610;DP4=1651,857,27,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.78585e-24;MQSB=0.955753;RPB=0.971544;SGB=32.0095;VDB=0.305831;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.5:10455384 chr05:010455384 0 W/10455384-10455384 FN3968-S SNP T -> C AC=1;AN=168;BQB=0.984504;DP=2648;DP4=1408,1109,8,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49293e-05;MQSB=0.41242;RPB=0.244471;SGB=34.4498;VDB=0.482258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.5:10456929 chr05:010456929 0 W/10456929-10456929 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.192233;DP=4154;DP4=2074,1831,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14507e-12;MQSB=0.987027;RPB=0.929752;SGB=68.91;VDB=0.240433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.5:10457148 chr05:010457148 0 W/10457148-10457148 FN1571-S Single Base Substitution G-A INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN3058-S.SNP.5:10457224 chr05:010457224 0 W/10457224-10457224 FN3058-S SNP G -> T AC=1;AN=184;BQB=0.997222;DP=3064;DP4=1412,1536,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38155e-12;MQSB=0.937755;RPB=0.898822;SGB=63.9222;VDB=0.873415;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.5:10467515 chr05:010467515 0 W/10467515-10467515 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.762169;DP=3909;DP4=2105,1614,25,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06357e-15;MQSB=0.923686;RPB=0.870789;SGB=167.105;VDB=0.831727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.5:10467729 chr05:010467729 0 W/10467729-10467729 FN3938-S SNP C -> T AC=1;AN=158;BQB=0.622514;DP=2527;DP4=1264,1164,15,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.8823e-10;MQSB=0.533282;RPB=0.834106;SGB=64.3985;VDB=0.471153;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.5:10469308 chr05:010469308 0 W/10469308-10469308 FN4098-S SNP T -> A AC=1;AN=182;BQB=0.963829;DP=3268;DP4=1345,1744,8,11;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=5.70402e-06;MQSB=0.247107;RPB=0.272724;SGB=33.1875;VDB=0.423267;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.5:10476717 chr05:010476717 0 W/10476717-10476717 FN4258-S SNP A -> G AC=1;AN=170;BQB=0.944147;DP=2670;DP4=1340,1242,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.00152654;MQSB=0.66842;RPB=0.87433;SGB=30.1021;VDB=0.428974;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E316|465|LOC_Os05g18210|protein_coding|CODING|LOC_Os05g18210.1|1|1) FN1538-S.SNP.5:10477968 chr05:010477968 0 W/10477968-10477968 FN1538-S Single Base Substitution A-G INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN1217-S.SNP.5:10481035 chr05:010481035 0 W/10481035-10481035 FN1217-S Single Base Substitution T-G INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2495.SNP.5:10481228 chr05:010481228 0 W/10481228-10481228 FN2495 SNP C -> G AC=2;AN=200;BQB=0.142687;DP=3991;DP4=1800,1862,12,13;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.0245552;MQB=0.999929;MQSB=0.293739;RPB=0.84625;SGB=109.527;VDB=0.1418;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E1696Q|1721|LOC_Os05g18230|protein_coding|CODING|LOC_Os05g18230.1|5|1) FN1673-S.SNP.5:10481370 chr05:010481370 0 W/10481370-10481370 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.592069;DP=1912;DP4=915,966,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0172594;MQB=0.0417284;MQSB=3.91581e-11;RPB=0.785383;SGB=-0.634963;VDB=0.723816;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1648|1721|LOC_Os05g18230|protein_coding|CODING|LOC_Os05g18230.1|5|1) FN2577-S.SNP.5:10484901 chr05:010484901 0 W/10484901-10484901 FN2577-S SNP G -> A AC=1;AN=198;BQB=0.999694;DP=4978;DP4=2118,2580,43,23;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.11812;MQB=4.98605e-20;MQSB=1.00337e-21;RPB=0.000507969;SGB=-2596.51;VDB=0.10477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R486C|1721|LOC_Os05g18230|protein_coding|CODING|LOC_Os05g18230.1|4|1) FN2568-S.SNP.5:10485624 chr05:010485624 0 W/10485624-10485624 FN2568-S SNP C -> T AC=1;AN=198;BQB=0.911262;DP=3813;DP4=1647,1976,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000524521;MQB=1.3837e-05;MQSB=0.876824;RPB=0.796925;SGB=22.1736;VDB=0.7357;EFF=INTRON(MODIFIER||||1721|LOC_Os05g18230|protein_coding|CODING|LOC_Os05g18230.1|2|1) FN3723-S.SNP.5:10488803 chr05:010488803 0 W/10488803-10488803 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.495117;DP=1419;DP4=558,759,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0436927;MQB=0.894913;MQSB=0.626482;RPB=0.999979;SGB=21.8853;VDB=0.639223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.5:10490251 chr05:010490251 0 W/10490251-10490251 FN3857-S SNP G -> T AC=1;AN=158;BQB=0.939156;DP=2485;DP4=1244,1146,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.05987e-08;MQSB=0.383333;RPB=0.767383;SGB=51.4366;VDB=0.466289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.5:10490252 chr05:010490252 0 W/10490252-10490252 FN3857-S SNP C -> G AC=1;AN=158;BQB=0.997214;DP=2494;DP4=1252,1145,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.66781e-08;MQSB=0.402526;RPB=0.981015;SGB=19.0798;VDB=0.550319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.5:10492031 chr05:010492031 0 W/10492031-10492031 FN1685-S SNP C -> T AC=2;AN=188;BQB=0.103976;DP=3394;DP4=1564,1709,29,36;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.73123e-27;MQSB=0.847858;RPB=0.838958;SGB=-85.5737;VDB=0.592741;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S195|220|LOC_Os05g18240|protein_coding|CODING|LOC_Os05g18240.1|2|1) FN-409.SNP.5:10492316 chr05:010492316 0 W/10492316-10492316 FN-409 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN705-S.SNP.5:10500327 chr05:010500327 0 W/10500327-10500327 FN705-S Single Base Substitution C-A INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN1724-S.SNP.5:10516682 chr05:010516682 0 W/10516682-10516682 FN1724-S SNP A -> G AC=2;AN=188;BQB=0.442964;DP=2813;DP4=2049,725,27,4;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.0327053;MQB=8.85027e-06;MQSB=1.42506e-11;RPB=0.972268;SGB=28.6876;VDB=0.556087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.5:10519035 chr05:010519035 0 W/10519035-10519035 FN1532-S Single Base Substitution C-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2618-S.SNP.5:10519902 chr05:010519902 0 W/10519902-10519902 FN2618-S SNP A -> T AC=1;AN=198;BQB=0.072877;DP=4266;DP4=2023,2002,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234412;MQB=1.33886e-12;MQSB=0.130442;RPB=0.973487;SGB=68.91;VDB=0.465018;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.5:10520036 chr05:010520036 0 W/10520036-10520036 FN369-S Single Base Substitution G-T INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN2257-S.SNP.5:10528712 chr05:010528712 0 W/10528712-10528712 FN2257-S SNP C -> T AC=1;AN=190;BQB=0.341271;DP=5170;DP4=2374,2378,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.45152e-12;MQSB=0.987505;RPB=0.969389;SGB=78.7471;VDB=0.885959;EFF=INTRON(MODIFIER||||123|LOC_Os05g18280|protein_coding|CODING|LOC_Os05g18280.1|5|1) FN2606-S.SNP.5:10530920 chr05:010530920 0 W/10530920-10530920 FN2606-S SNP C -> A AC=2;AN=198;BQB=0.637305;DP=3520;DP4=1890,1346,7,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.40215e-05;MQSB=0.707553;RPB=0.645722;SGB=1.37381;VDB=0.844193;EFF=INTRON(MODIFIER||||123|LOC_Os05g18280|protein_coding|CODING|LOC_Os05g18280.1|4|1) FN2209-S.SNP.5:10533954 chr05:010533954 0 W/10533954-10533954 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.997632;DP=4563;DP4=2085,2168,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000438308;MQB=1.76369e-09;MQSB=0.935099;RPB=0.697927;SGB=53.8699;VDB=0.760738;EFF=INTRON(MODIFIER||||123|LOC_Os05g18280|protein_coding|CODING|LOC_Os05g18280.1|1|1) FN1281-S.SNP.5:10539452 chr05:010539452 0 W/10539452-10539452 FN1281-S Single Base Substitution A-G INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1615-S.SNP.5:10557121 chr05:010557121 0 W/10557121-10557121 FN1615-S Single Base Substitution A-G INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3666-S.SNP.5:10557892 chr05:010557892 0 W/10557892-10557892 FN3666-S SNP T -> C AC=2;AN=190;BQB=0.695396;DP=2845;DP4=1267,1409,17,16;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0239016;MQB=2.01045e-08;MQSB=0.0662457;RPB=0.999382;SGB=144.727;VDB=0.685514;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C46R|254|LOC_Os05g18330|protein_coding|CODING|LOC_Os05g18330.1|1|1) FN3658-S.SNP.5:10560205 chr05:010560205 0 W/10560205-10560205 FN3658-S SNP T -> G AC=1;AN=190;BQB=0.660384;DP=3019;DP4=1480,1431,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0304737;MQB=0.0435822;MQSB=0.00415106;RPB=0.985905;SGB=8.33661;VDB=0.842929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Gta|L467V|1358|LOC_Os05g18340|protein_coding|CODING|LOC_Os05g18340.1|1|1) FN276-S.SNP.5:10562448 chr05:010562448 0 W/10562448-10562448 FN276-S Single Base Substitution C-T INTRON HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1239-S.SNP.5:10562716 chr05:010562716 0 W/10562716-10562716 FN1239-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g18340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3487-S.SNP.5:10567196 chr05:010567196 0 W/10567196-10567196 FN3487-S SNP G -> C AC=1;AN=182;BQB=0.934952;DP=3126;DP4=1257,1787,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0802943;MQB=0.995249;MQSB=0;RPB=0.645533;SGB=62.3078;VDB=0.56357;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.5:10567448 chr05:010567448 0 W/10567448-10567448 FN691-S Single Base Substitution G-A INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2271-S.SNP.5:10568360 chr05:010568360 0 W/10568360-10568360 FN2271-S SNP A -> T AC=1;AN=190;BQB=0.712589;DP=4270;DP4=1857,1898,14,21;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0922717;MQB=0.899414;MQSB=0.000311278;RPB=0.941491;SGB=-4.35995;VDB=0.871325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.5:10570151 chr05:010570151 0 W/10570151-10570151 FN3445-S SNP G -> A AC=1;AN=182;BQB=0.805364;DP=2117;DP4=998,1036,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.000259917;MQSB=0.0512692;RPB=0.838242;SGB=39.699;VDB=0.364597;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.5:10570179 chr05:010570179 0 W/10570179-10570179 FN588-S Single Base Substitution A-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2797-S.SNP.5:10570952 chr05:010570952 0 W/10570952-10570952 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.792289;DP=4491;DP4=2038,2207,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00489869;MQB=4.86159e-06;MQSB=0.250591;RPB=0.812081;SGB=54.144;VDB=0.155156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.5:10573256 chr05:010573256 0 W/10573256-10573256 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1324-S.SNP.5:10574209 chr05:010574209 0 W/10574209-10574209 FN1324-S Single Base Substitution C-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN3452-S.SNP.5:10576711 chr05:010576711 0 W/10576711-10576711 FN3452-S SNP G -> A AC=1;AN=182;BQB=0.886585;DP=3107;DP4=1378,1650,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.09565e-07;MQSB=0.895832;RPB=0.987884;SGB=42.7914;VDB=0.908694;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.5:10581501 chr05:010581501 0 W/10581501-10581501 FN725-S Single Base Substitution G-T INTERGENIC HOMO SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN-181.SNP.5:10582488 chr05:010582488 0 W/10582488-10582488 FN-181 Single Base Substitution T-G INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1430-S.SNP.5:10585579 chr05:010585579 0 W/10585579-10585579 FN1430-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g18370 retrotransposon protein, putative, unclassified SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3810-S.SNP.5:10593479 chr05:010593479 0 W/10593479-10593479 FN3810-S SNP A -> T AC=2;AN=190;BQB=0.525066;DP=2861;DP4=1366,1391,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000349528;MQB=5.19099e-11;MQSB=0.383426;RPB=0.84344;SGB=117.403;VDB=0.540847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.5:10594627 chr05:010594627 0 W/10594627-10594627 FN2440 SNP T -> G AC=1;AN=200;BQB=0.98623;DP=5171;DP4=2430,2489,7,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00464127;MQB=3.03079e-05;MQSB=3.94176e-07;RPB=0.965622;SGB=68.0801;VDB=0.748707;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.5:10607250 chr05:010607250 0 W/10607250-10607250 FN3852-S SNP C -> G AC=2;AN=158;BQB=0.744342;DP=2325;DP4=1085,1149,15,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.00129032;MQB=6.96962e-14;MQSB=0.359963;RPB=0.16596;SGB=61.7299;VDB=0.38922;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.5:10607955 chr05:010607955 0 W/10607955-10607955 FN355-S Single Base Substitution G-A INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3815-S.SNP.5:10609328 chr05:010609328 0 W/10609328-10609328 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.75709;DP=2922;DP4=1408,1387,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0054757;MQB=0.00181206;MQSB=0.0263197;RPB=0.602495;SGB=21.8853;VDB=0.395707;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.5:10611708 chr05:010611708 0 W/10611708-10611708 FN3666-S SNP A -> G AC=2;AN=190;BQB=0.989426;DP=2580;DP4=1449,991,15,4;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00310078;MQB=1.37874e-08;MQSB=0.0509318;RPB=0.997172;SGB=80.9724;VDB=0.392099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.5:10612381 chr05:010612381 0 W/10612381-10612381 FN3293-S SNP A -> G AC=1;AN=184;BQB=0.819305;DP=3215;DP4=1438,1664,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0239502;MQB=0.237746;MQSB=2.76739e-10;RPB=0.985737;SGB=18.2315;VDB=0.149744;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.5:10616827 chr05:010616827 0 W/10616827-10616827 FN1037-S Single Base Substitution T-C INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1630-S.SNP.5:10617848 chr05:010617848 0 W/10617848-10617848 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3110-S.SNP.5:10618779 chr05:010618779 0 W/10618779-10618779 FN3110-S SNP G -> C AC=2;AN=184;BQB=0.946567;DP=3971;DP4=1975,1861,29,16;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00705112;MQB=9.27656e-16;MQSB=0.15879;RPB=0.339109;SGB=197.961;VDB=0.307275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.5:10619473 chr05:010619473 0 W/10619473-10619473 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.134637;DP=4055;DP4=1815,1776,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0162762;MQB=0.0929908;MQSB=1.97202e-23;RPB=0.949186;SGB=52.7004;VDB=0.248816;EFF=INTERGENIC(MODIFIER||||||||||1) FN540-S.SNP.5:10620996 chr05:010620996 0 W/10620996-10620996 FN540-S Single Base Substitution C-T INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN4271-S.SNP.5:10643710 chr05:010643710 0 W/10643710-10643710 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.934931;DP=2460;DP4=1142,1240,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000406504;MQB=2.44233e-05;MQSB=0.962094;RPB=0.412236;SGB=38.987;VDB=0.10087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.5:10645454 chr05:010645454 0 W/10645454-10645454 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.397702;DP=5112;DP4=2369,2456,17,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4e-20;MQSB=0.882018;RPB=0.808066;SGB=150.973;VDB=0.095535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.5:10650793 chr05:010650793 0 W/10650793-10650793 FN3280-S SNP G -> T AC=1;AN=184;BQB=0.974725;DP=3052;DP4=1492,1435,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.0566841;MQB=0.566647;MQSB=9.42071e-19;RPB=0.7461;SGB=42.7914;VDB=0.599011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.5:10670397 chr05:010670397 0 W/10670397-10670397 FN3444-S SNP G -> T AC=1;AN=182;BQB=0.986322;DP=2588;DP4=1284,1207,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0312983;MQB=0.00872442;MQSB=2.33129e-05;RPB=0.937268;SGB=15.7097;VDB=0.852905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.5:10670764 chr05:010670764 0 W/10670764-10670764 FN1097-S Single Base Substitution G-T INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1097-S.SNP.5:10670765 chr05:010670765 0 W/10670765-10670765 FN1097-S Single Base Substitution G-T INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2493.SNP.5:10688085 chr05:010688085 0 W/10688085-10688085 FN2493 SNP C -> A AC=1;AN=200;BQB=0.743624;DP=5199;DP4=2250,2652,8,13;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0711675;MQB=0.937811;MQSB=1.80248e-05;RPB=0.997716;SGB=91.1059;VDB=0.374624;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G499|1808|LOC_Os05g18490|protein_coding|CODING|LOC_Os05g18490.1|3|1) FN2354.SNP.5:10689545 chr05:010689545 0 W/10689545-10689545 FN2354 SNP G -> A AC=1;AN=192;BQB=0.364846;DP=4945;DP4=2275,2426,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0821031;MQB=0.219918;MQSB=6.10769e-29;RPB=0.184021;SGB=-37.0704;VDB=0.701568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R972H|1808|LOC_Os05g18490|protein_coding|CODING|LOC_Os05g18490.1|4|1) FN3510-S.SNP.5:10690697 chr05:010690697 0 W/10690697-10690697 FN3510-S SNP A -> G AC=2;AN=188;BQB=0.908527;DP=3204;DP4=1447,1630,18,25;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0502497;MQB=0.0001205;MQSB=0.166255;RPB=0.953839;SGB=189.821;VDB=0.291914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E1356G|1808|LOC_Os05g18490|protein_coding|CODING|LOC_Os05g18490.1|4|1) FN2330.SNP.5:10692890 chr05:010692890 0 W/10692890-10692890 FN2330 SNP C -> G AC=1;AN=192;BQB=0.951533;DP=4756;DP4=2080,2277,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.113961;MQB=0.984249;MQSB=1.73876e-22;RPB=0.9705;SGB=15.1765;VDB=0.163591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.5:10696791 chr05:010696791 0 W/10696791-10696791 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.985893;DP=2896;DP4=1260,1523,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0631906;MQB=0.690743;MQSB=0.0753593;RPB=0.92727;SGB=35.9843;VDB=0.608028;EFF=INTRON(MODIFIER||||399|LOC_Os05g18500|protein_coding|CODING|LOC_Os05g18500.1|1|1) FN4187-S.SNP.5:10697715 chr05:010697715 0 W/10697715-10697715 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.997342;DP=2635;DP4=1468,1091,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0512334;MQB=0.949549;MQSB=0.0229266;RPB=0.530818;SGB=70.0854;VDB=0.864436;EFF=INTRON(MODIFIER||||399|LOC_Os05g18500|protein_coding|CODING|LOC_Os05g18500.1|1|1) FN933-S.SNP.5:10701740 chr05:010701740 0 W/10701740-10701740 FN933-S Single Base Substitution C-T INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1085-S.SNP.5:10702693 chr05:010702693 0 W/10702693-10702693 FN1085-S Single Base Substitution T-A INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1506-S.SNP.5:10704413 chr05:010704413 0 W/10704413-10704413 FN1506-S Single Base Substitution A-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1278-S.SNP.5:10714491 chr05:010714491 0 W/10714491-10714491 FN1278-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3911-S.SNP.5:10717157 chr05:010717157 0 W/10717157-10717157 FN3911-S SNP T -> C AC=2;AN=158;BQB=0.929021;DP=2633;DP4=1243,1300,22,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.60056e-20;MQSB=0.997163;RPB=0.92597;SGB=64.0993;VDB=0.805974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.5:10719932 chr05:010719932 0 W/10719932-10719932 FN1399-S Single Base Substitution T-C INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-335.SNP.5:10725039 chr05:010725039 0 W/10725039-10725039 FN-335 Single Base Substitution C-T INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1679-S.SNP.5:10729452 chr05:010729452 0 W/10729452-10729452 FN1679-S SNP G -> A AC=2;AN=188;BQB=0.99303;DP=1261;DP4=417,774,2,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.17784e-05;MQSB=0.95045;RPB=0.0456498;SGB=21.8113;VDB=0.211211;EFF=INTRON(MODIFIER||||1232|LOC_Os05g18540|protein_coding|CODING|LOC_Os05g18540.1|3|1) FN2467.SNP.5:10730724 chr05:010730724 0 W/10730724-10730724 FN2467 SNP T -> C AC=1;AN=200;BQB=0.312586;DP=4715;DP4=2410,1996,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73042e-13;MQSB=0.976638;RPB=0.884946;SGB=91.1059;VDB=0.800252;EFF=INTRON(MODIFIER||||1232|LOC_Os05g18540|protein_coding|CODING|LOC_Os05g18540.1|3|1) FN1109-S.SNP.5:10741289 chr05:010741289 0 W/10741289-10741289 FN1109-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g18550 retrotransposon protein, putative, unclassified, expressed SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3535-S.SNP.5:10750325 chr05:010750325 0 W/10750325-10750325 FN3535-S SNP C -> A AC=1;AN=188;BQB=0.586478;DP=5931;DP4=3270,2532,4,14;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.439555;MQB=0.00268474;MQSB=0;RPB=0.9174;SGB=76.2387;VDB=0.110461;EFF=INTRON(MODIFIER||||1146|LOC_Os05g18570|protein_coding|CODING|LOC_Os05g18570.1|2|1) FN2216-S.SNP.5:10757928 chr05:010757928 0 W/10757928-10757928 FN2216-S SNP A -> G AC=1;AN=190;BQB=0.126471;DP=4111;DP4=1611,2237,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.94426e-12;MQSB=0.833983;RPB=0.98546;SGB=85.8548;VDB=0.316154;EFF=INTRON(MODIFIER||||474|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.2|9|1) FN2582-S.SNP.5:10763208 chr05:010763208 0 W/10763208-10763208 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.733579;DP=4564;DP4=2210,2089,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.48705e-05;MQSB=0.911267;RPB=0.487328;SGB=13.7737;VDB=0.655343;EFF=INTRON(MODIFIER||||474|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.2|8|1) FN669-S.SNP.5:10763663 chr05:010763663 0 W/10763663-10763663 FN669-S Single Base Substitution T-A INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4179-S.SNP.5:10764067 chr05:010764067 0 W/10764067-10764067 FN4179-S SNP G -> C AC=1;AN=170;BQB=0.790334;DP=2341;DP4=1156,1095,9,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00077e-11;MQSB=0.995566;RPB=0.939746;SGB=65.8619;VDB=0.986431;EFF=INTRON(MODIFIER||||474|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.2|8|1) FN-210.SNP.5:10770581 chr05:010770581 0 W/10770581-10770581 FN-210 Single Base Substitution G-A INTRON HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN4184-S.SNP.5:10778342 chr05:010778342 0 W/10778342-10778342 FN4184-S SNP T -> A AC=1;AN=170;BQB=0.965584;DP=1576;DP4=796,722,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.00220224;MQSB=4.91166e-05;RPB=0.958261;SGB=30.1021;VDB=0.00850514;EFF=INTRON(MODIFIER||||483|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.1|7|1),INTRON(MODIFIER||||474|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.2|7|1),INTRON(MODIFIER||||443|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.3|7|1) FN2404.SNP.5:10787953 chr05:010787953 0 W/10787953-10787953 FN2404 SNP T -> A AC=1;AN=200;BQB=0.695155;DP=5085;DP4=2713,1998,21,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.72112e-23;MQSB=0.801612;RPB=0.806182;SGB=-44.7915;VDB=0.0351835;EFF=INTRON(MODIFIER||||483|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.1|6|1),INTRON(MODIFIER||||474|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.2|6|1),INTRON(MODIFIER||||443|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.3|6|1),INTRON(MODIFIER||||439|LOC_Os05g18604|protein_coding|CODING|LOC_Os05g18604.4|6|1) FN3951-S.SNP.5:10808892 chr05:010808892 0 W/10808892-10808892 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.999446;DP=2035;DP4=1075,880,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.7461e-05;MQSB=0.912085;RPB=0.745475;SGB=7.59999;VDB=0.373295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.5:10813026 chr05:010813026 0 W/10813026-10813026 FN1351-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3558-S.SNP.5:10815152 chr05:010815152 0 W/10815152-10815152 FN3558-S SNP A -> G AC=2;AN=188;BQB=0.652779;DP=2904;DP4=1535,1275,8,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.84829e-14;MQSB=0.983023;RPB=0.474049;SGB=112.585;VDB=0.651071;EFF=INTRON(MODIFIER||||399|LOC_Os05g18670|protein_coding|CODING|LOC_Os05g18670.1|1|1) FN3415-S.SNP.5:10819585 chr05:010819585 0 W/10819585-10819585 FN3415-S SNP G -> A AC=2;AN=182;BQB=0.148132;DP=1822;DP4=1191,546,16,3;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.17574e-07;MQSB=0.013724;RPB=0.991689;SGB=56.8786;VDB=0.906762;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.5:10821290 chr05:010821290 0 W/10821290-10821290 FN_827-1 Single Base Substitution G-A HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2121-S.SNP.5:10822522 chr05:010822522 0 W/10822522-10822522 FN2121-S SNP C -> T AC=2;AN=168;BQB=0.347936;DP=3470;DP4=1665,1703,25,34;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.13804;MQB=0.000366885;MQSB=9.26907e-07;RPB=0.790049;SGB=-758.807;VDB=0.141626;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D115|496|LOC_Os05g18680|protein_coding|CODING|LOC_Os05g18680.1|1|1) FN2729-S.SNP.5:10823678 chr05:010823678 0 W/10823678-10823678 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.996849;DP=4663;DP4=1970,2469,8,8;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0186575;MQB=0.012405;MQSB=6.15465e-06;RPB=0.887502;SGB=68.0801;VDB=0.437013;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T379M|496|LOC_Os05g18680|protein_coding|CODING|LOC_Os05g18680.1|3|1) FN502-S.SNP.5:10830390 chr05:010830390 0 W/10830390-10830390 FN502-S Single Base Substitution G-A INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN3517-S.SNP.5:10832188 chr05:010832188 0 W/10832188-10832188 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.995784;DP=3794;DP4=2425,1282,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.20745e-15;MQSB=0.649802;RPB=0.668075;SGB=103.498;VDB=0.907473;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.5:10834431 chr05:010834431 0 W/10834431-10834431 FN1627-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3287-S.SNP.5:10835330 chr05:010835330 0 W/10835330-10835330 FN3287-S SNP G -> A AC=2;AN=184;BQB=0.747153;DP=3183;DP4=1444,1588,20,18;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0179076;MQB=0.223926;MQSB=9.43544e-05;RPB=0.20237;SGB=81.2762;VDB=0.95679;EFF=SPLICE_SITE_DONOR(HIGH||||711|LOC_Os05g18710|protein_coding|CODING|LOC_Os05g18710.1|2|1),INTRON(MODIFIER||||711|LOC_Os05g18710|protein_coding|CODING|LOC_Os05g18710.1|2|1);LOF=(LOC_Os05g18710|LOC_Os05g18710|1|1.00) FN1097-S.SNP.5:10837489 chr05:010837489 0 W/10837489-10837489 FN1097-S Single Base Substitution T-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2620-S.SNP.5:10849813 chr05:010849813 0 W/10849813-10849813 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.999902;DP=4101;DP4=2029,1853,17,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17015e-11;MQSB=0.937565;RPB=0.566187;SGB=-9.66994;VDB=0.280063;EFF=INTRON(MODIFIER||||722|LOC_Os05g18730|protein_coding|CODING|LOC_Os05g18730.1|13|1) FN3752-S.SNP.5:10854234 chr05:010854234 0 W/10854234-10854234 FN3752-S SNP G -> T AC=1;AN=190;BQB=0.918876;DP=2755;DP4=1717,948,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20182e-08;MQSB=0.941862;RPB=0.978999;SGB=53.6492;VDB=0.990452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T102N|722|LOC_Os05g18730|protein_coding|CODING|LOC_Os05g18730.1|2|1) FN3811-S.SNP.5:10855957 chr05:010855957 0 W/10855957-10855957 FN3811-S SNP G -> T AC=1;AN=190;BQB=0.637;DP=3229;DP4=1505,1623,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.5958e-12;MQSB=0.996657;RPB=0.75439;SGB=75.1932;VDB=0.893257;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.5:10856288 chr05:010856288 0 W/10856288-10856288 FN692-S Single Base Substitution C-G INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-287.SNP.5:10870428 chr05:010870428 0 W/10870428-10870428 FN-287 Single Base Substitution C-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN3368-S.SNP.5:10871068 chr05:010871068 0 W/10871068-10871068 FN3368-S SNP T -> A AC=1;AN=184;BQB=0.750234;DP=3840;DP4=1916,1776,10,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.76695e-13;MQSB=0.346298;RPB=0.942208;SGB=-10.0179;VDB=0.0854852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.5:10875411 chr05:010875411 0 W/10875411-10875411 FN1434-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g18760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2491.SNP.5:10893660 chr05:010893660 0 W/10893660-10893660 FN2491 SNP C -> T AC=1;AN=200;BQB=0.208109;DP=4233;DP4=2149,1671,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11755e-12;MQSB=0.7609;RPB=0.81297;SGB=-10.6896;VDB=0.174914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.5:10900052 chr05:010900052 0 W/10900052-10900052 FN1053-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN573-S.SNP.5:10902650 chr05:010902650 0 W/10902650-10902650 FN573-S Single Base Substitution T-A INTRON HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3438-S.SNP.5:10908553 chr05:010908553 0 W/10908553-10908553 FN3438-S SNP T -> C AC=1;AN=184;BQB=0.931427;DP=2467;DP4=1393,967,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.86188e-09;MQSB=0.989709;RPB=0.96908;SGB=60.4004;VDB=0.421084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.5:10913318 chr05:010913318 0 W/10913318-10913318 FN2205-S SNP C -> A AC=2;AN=190;BQB=0.636398;DP=4186;DP4=1743,2147,22,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.8412e-27;MQSB=0.208592;RPB=0.798811;SGB=60.0507;VDB=0.885662;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.5:10918245 chr05:010918245 0 W/10918245-10918245 FN786-S Single Base Substitution C-T INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN1307-S.SNP.5:10919917 chr05:010919917 0 W/10919917-10919917 FN1307-S Single Base Substitution T-G INTRON HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN-314.SNP.5:10921136 chr05:010921136 0 W/10921136-10921136 FN-314 Single Base Substitution C-A INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN950-S.SNP.5:10922712 chr05:010922712 0 W/10922712-10922712 FN950-S Single Base Substitution A-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1662-S.SNP.5:10928313 chr05:010928313 0 W/10928313-10928313 FN1662-S Single Base Substitution G-T INTRON HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN4177-S.SNP.5:10938857 chr05:010938857 0 W/10938857-10938857 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.924746;DP=2514;DP4=1270,1181,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01597e-09;MQSB=0.996932;RPB=0.96788;SGB=61.2001;VDB=0.906319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.5:10942547 chr05:010942547 0 W/10942547-10942547 FN2474 SNP A -> G AC=1;AN=200;BQB=0.829717;DP=4889;DP4=2174,2317,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204541;MQB=4.44512e-11;MQSB=0.232269;RPB=0.966246;SGB=19.1209;VDB=0.986298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.5:10943016 chr05:010943016 0 W/10943016-10943016 FN1373-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g18840 retrotransposon protein, putative, unclassified, expressed SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2678-S.SNP.5:10951862 chr05:010951862 0 W/10951862-10951862 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.799057;DP=4967;DP4=2287,2378,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16604e-12;MQSB=0.956063;RPB=0.232688;SGB=37.3004;VDB=0.604287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.5:10955541 chr05:010955541 0 W/10955541-10955541 FN1061-S Single Base Substitution A-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN967-S.SNP.5:10957895 chr05:010957895 0 W/10957895-10957895 FN967-S Single Base Substitution A-T INTERGENIC HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN-198.SNP.5:10959833 chr05:010959833 0 W/10959833-10959833 FN-198 Single Base Substitution G-A INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN2529-S.SNP.5:10974093 chr05:010974093 0 W/10974093-10974093 FN2529-S SNP C -> T AC=1;AN=198;BQB=0.85536;DP=4240;DP4=2023,2022,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.28985e-08;MQSB=0.831595;RPB=0.882416;SGB=18.9639;VDB=0.3434;EFF=SPLICE_SITE_REGION(LOW||||901|LOC_Os05g18900|protein_coding|CODING|LOC_Os05g18900.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D810|901|LOC_Os05g18900|protein_coding|CODING|LOC_Os05g18900.1|8|1) FN3554-S.SNP.5:10974093 chr05:010974093 0 W/10974093-10974093 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.995235;DP=2523;DP4=1184,1261,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000792707;MQB=9.14165e-16;MQSB=0.981456;RPB=0.0981097;SGB=117.128;VDB=0.893112;EFF=SPLICE_SITE_REGION(LOW||||901|LOC_Os05g18900|protein_coding|CODING|LOC_Os05g18900.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D810|901|LOC_Os05g18900|protein_coding|CODING|LOC_Os05g18900.1|8|1) FN2380.SNP.5:10975079 chr05:010975079 0 W/10975079-10975079 FN2380 SNP A -> T AC=1;AN=192;BQB=0.0894002;DP=3496;DP4=1898,1039,14,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000286041;MQB=5.38601e-07;MQSB=0.924226;RPB=0.723179;SGB=10.4835;VDB=0.255357;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.5:10979085 chr05:010979085 0 W/10979085-10979085 FN1748-S SNP G -> C AC=1;AN=188;BQB=0.947609;DP=2286;DP4=1355,904,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.106737;MQB=0.990129;MQSB=2.85524e-09;RPB=0.993742;SGB=23.5329;VDB=0.658519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tCg|W161S|778|LOC_Os05g18910|protein_coding|CODING|LOC_Os05g18910.1|1|1) FN-199.SNP.5:10980734 chr05:010980734 0 W/10980734-10980734 FN-199 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g18910 retrotransposon protein, putative, unclassified, expressed SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-246.SNP.5:10981049 chr05:010981049 0 W/10981049-10981049 FN-246 Single Base Substitution C-T INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3306-S.SNP.5:10981887 chr05:010981887 0 W/10981887-10981887 FN3306-S SNP C -> T AC=1;AN=184;BQB=0.997093;DP=3273;DP4=1757,1400,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.39774e-10;MQSB=0.702224;RPB=0.790022;SGB=3.75875;VDB=0.834499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1025K|1032|LOC_Os05g18920|protein_coding|CODING|LOC_Os05g18920.1|2|1) FN3306-S.SNP.5:10981889 chr05:010981889 0 W/10981889-10981889 FN3306-S SNP A -> T AC=1;AN=184;BQB=0.998863;DP=3269;DP4=1767,1398,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11896e-08;MQSB=0.609423;RPB=0.497815;SGB=35.7479;VDB=0.698826;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I1024N|1032|LOC_Os05g18920|protein_coding|CODING|LOC_Os05g18920.1|2|1) FN3306-S.SNP.5:10981891 chr05:010981891 0 W/10981891-10981891 FN3306-S SNP A -> T AC=1;AN=184;BQB=0.999025;DP=3270;DP4=1767,1384,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.21857e-08;MQSB=0.658661;RPB=0.528388;SGB=48.7425;VDB=0.703185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N1023K|1032|LOC_Os05g18920|protein_coding|CODING|LOC_Os05g18920.1|2|1) FN4160-S.SNP.5:10983753 chr05:010983753 0 W/10983753-10983753 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.961083;DP=2622;DP4=1287,1243,16,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000762777;MQB=5.15255e-15;MQSB=0.814813;RPB=0.723588;SGB=93.4031;VDB=0.917221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H403Y|1032|LOC_Os05g18920|protein_coding|CODING|LOC_Os05g18920.1|2|1) FN_398-1.SNP.5:10985037 chr05:010985037 0 W/10985037-10985037 FN_398-1 Single Base Substitution C-A INTRON HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN3670-S.SNP.5:10987260 chr05:010987260 0 W/10987260-10987260 FN3670-S SNP C -> T AC=1;AN=190;BQB=0.99927;DP=3162;DP4=1743,1298,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.60656e-06;MQSB=0.986675;RPB=0.995551;SGB=28.9929;VDB=0.191869;EFF=INTRON(MODIFIER||||705|LOC_Os05g18930|protein_coding|CODING|LOC_Os05g18930.1|2|1) FN-201.SNP.5:10989301 chr05:010989301 0 W/10989301-10989301 FN-201 Single Base Substitution C-T INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2085-S.SNP.5:10991111 chr05:010991111 0 W/10991111-10991111 FN2085-S SNP C -> T AC=1;AN=168;BQB=0.424369;DP=2790;DP4=1426,1277,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66261e-08;MQSB=0.607657;RPB=0.498971;SGB=41.6096;VDB=0.866636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A65V|135|LOC_Os05g18940|protein_coding|CODING|LOC_Os05g18940.1|1|1) FN2792-S.SNP.5:10992251 chr05:010992251 0 W/10992251-10992251 FN2792-S SNP C -> T AC=2;AN=198;BQB=0.951839;DP=4242;DP4=2230,1823,17,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.37028e-25;MQSB=0.537683;RPB=0.918656;SGB=182.807;VDB=0.105727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.5:10994013 chr05:010994013 0 W/10994013-10994013 FN2276-S SNP G -> T AC=1;AN=190;BQB=0.993199;DP=4331;DP4=1773,2179,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.98206e-11;MQSB=0.0212338;RPB=0.867295;SGB=-40.3396;VDB=0.781068;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.5:10998093 chr05:010998093 0 W/10998093-10998093 FN831-S Single Base Substitution A-C INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN3571-S.SNP.5:10999263 chr05:010999263 0 W/10999263-10999263 FN3571-S SNP T -> C AC=2;AN=188;BQB=0.876789;DP=2528;DP4=1203,1247,13,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.7103e-13;MQSB=0.991629;RPB=0.93246;SGB=89.8686;VDB=0.0980998;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.5:10999695 chr05:010999695 0 W/10999695-10999695 FN825-S Single Base Substitution T-A INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3462-S.SNP.5:11000146 chr05:011000146 0 W/11000146-11000146 FN3462-S SNP C -> A AC=1;AN=184;BQB=0.999618;DP=2922;DP4=1261,1510,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=2.86471e-07;MQSB=0.814997;RPB=0.645774;SGB=28.7043;VDB=0.0039656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.5:11010803 chr05:011010803 0 W/11010803-11010803 FN3761-S SNP A -> G AC=1;AN=190;BQB=0.896189;DP=2174;DP4=1056,1060,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.45912e-05;MQSB=0.96639;RPB=0.897896;SGB=35.4339;VDB=0.272032;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.5:11015989 chr05:011015989 0 W/11015989-11015989 FN684-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g18980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN2152-S.SNP.5:11016069 chr05:011016069 0 W/11016069-11016069 FN2152-S SNP G -> A AC=1;AN=168;BQB=0.000989858;DP=3219;DP4=1600,1577,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00372787;MQB=0.000171833;MQSB=0.544398;RPB=0.589883;SGB=-161.06;VDB=0.633914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G483R|1080|LOC_Os05g18980|protein_coding|CODING|LOC_Os05g18980.1|2|1) FN1100-S.SNP.5:11018146 chr05:011018146 0 W/11018146-11018146 FN1100-S Single Base Substitution A-G INTERGENIC HET SNo: 976, Mutant_ID: FN1100-S, Generation: M2, Mutations: 2, Genes: 1, Seed availability: Yes. W423-5-1.SNP.5:11018639 chr05:011018639 0 W/11018639-11018639 W423-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN420-S.SNP.5:11032422 chr05:011032422 0 W/11032422-11032422 FN420-S Single Base Substitution C-T INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN-314.SNP.5:11042651 chr05:011042651 0 W/11042651-11042651 FN-314 Single Base Substitution C-G UTR_5_PRIME HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2180-S.SNP.5:11042898 chr05:011042898 0 W/11042898-11042898 FN2180-S SNP C -> G AC=1;AN=190;BQB=0.970187;DP=3623;DP4=1387,1983,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.24661e-09;MQSB=0.663127;RPB=0.75341;SGB=-14.3297;VDB=0.0719246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gGa|A58G|519|LOC_Os05g19030|protein_coding|CODING|LOC_Os05g19030.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gGa|A58G|526|LOC_Os05g19030|protein_coding|CODING|LOC_Os05g19030.1|1|1) FN751-S.SNP.5:11048269 chr05:011048269 0 W/11048269-11048269 FN751-S Single Base Substitution A-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2262-S.SNP.5:11050555 chr05:011050555 0 W/11050555-11050555 FN2262-S SNP G -> T AC=2;AN=190;BQB=0.823061;DP=5182;DP4=2542,2204,32,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.65785e-29;MQSB=0.813099;RPB=0.883541;SGB=188.917;VDB=0.0583607;EFF=INTRON(MODIFIER||||221|LOC_Os05g19040|protein_coding|CODING|LOC_Os05g19040.1|1|1) FN1292-S.SNP.5:11056362 chr05:011056362 0 W/11056362-11056362 FN1292-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g19050 retrotransposon protein, putative, unclassified, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3450-S.SNP.5:11067645 chr05:011067645 0 W/11067645-11067645 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.766551;DP=2695;DP4=1210,1315,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0103896;MQB=0.947317;MQSB=1.33678e-05;RPB=0.840865;SGB=30.6558;VDB=0.990326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.5:11072922 chr05:011072922 0 W/11072922-11072922 FN-155 Single Base Substitution A-G INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2640-S.SNP.5:11075749 chr05:011075749 0 W/11075749-11075749 FN2640-S SNP T -> C AC=2;AN=200;BQB=0.95872;DP=4912;DP4=2354,2212,39,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.96567e-43;MQSB=0.952641;RPB=0.997101;SGB=207.211;VDB=0.621024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V331A|434|LOC_Os05g19080|protein_coding|CODING|LOC_Os05g19080.1|6|1) FN-69.SNP.5:11078482 chr05:011078482 0 W/11078482-11078482 FN-69 Single Base Substitution G-T INTRON HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2362.SNP.5:11087658 chr05:011087658 0 W/11087658-11087658 FN2362 SNP C -> G AC=1;AN=192;BQB=0.821924;DP=4894;DP4=2214,2373,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.4203e-06;MQSB=0.857564;RPB=0.480118;SGB=13.5279;VDB=0.859324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.5:11095344 chr05:011095344 0 W/11095344-11095344 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.712349;DP=5384;DP4=2674,2416,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48264e-08;MQSB=0.310471;RPB=0.842929;SGB=-14.9257;VDB=0.634553;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.5:11099320 chr05:011099320 0 W/11099320-11099320 FN1636-S Single Base Substitution A-G INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN4108-S.SNP.5:11112201 chr05:011112201 0 W/11112201-11112201 FN4108-S SNP G -> T AC=1;AN=182;BQB=1.10337e-13;DP=2157;DP4=849,856,13,33;HOB=6.03792e-05;ICB=0.000121422;MQ=39;MQ0F=0.0700046;MQB=9.71596e-13;MQSB=7.25962e-14;RPB=0.98271;SGB=-530.983;VDB=0.000372514;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.5:11125493 chr05:011125493 0 W/11125493-11125493 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.990768;DP=5285;DP4=3167,1856,13,12;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.501608;MQB=0.493926;MQSB=0;RPB=0.600841;SGB=50.3263;VDB=0.965954;EFF=INTRON(MODIFIER||||1003|LOC_Os05g19170|protein_coding|CODING|LOC_Os05g19170.1|1|1) FN3779-S.SNP.5:11130209 chr05:011130209 0 W/11130209-11130209 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.955228;DP=2896;DP4=1387,1401,19,22;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0117403;MQB=7.8879e-14;MQSB=0.314021;RPB=0.788952;SGB=181.158;VDB=0.782234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L133F|653|LOC_Os05g19180|protein_coding|CODING|LOC_Os05g19180.1|1|1) FN2789-S.SNP.5:11139573 chr05:011139573 0 W/11139573-11139573 FN2789-S SNP C -> T AC=2;AN=198;BQB=0.250573;DP=4916;DP4=2723,1896,19,9;HOB=0.019998;ICB=0.495001;MQ=34;MQ0F=0.131204;MQB=0.720696;MQSB=0;RPB=0.0948359;SGB=57.8907;VDB=0.372183;EFF=INTRON(MODIFIER||||1810|LOC_Os05g19190|protein_coding|CODING|LOC_Os05g19190.1|1|1) FN2573-S.SNP.5:11142713 chr05:011142713 0 W/11142713-11142713 FN2573-S SNP C -> A AC=1;AN=198;BQB=0.989418;DP=3847;DP4=2101,1509,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00103977;MQB=0.000175929;MQSB=0.457425;RPB=0.899371;SGB=13.7737;VDB=0.547427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G1102C|1113|LOC_Os05g19200|protein_coding|CODING|LOC_Os05g19200.1|3|1) FN3767-S.SNP.5:11145332 chr05:011145332 0 W/11145332-11145332 FN3767-S SNP C -> T AC=1;AN=190;BQB=0.999999;DP=3012;DP4=1644,1273,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.119522;MQB=0.611635;MQSB=0.0623169;RPB=0.883721;SGB=44.5415;VDB=0.50116;EFF=INTRON(MODIFIER||||1113|LOC_Os05g19200|protein_coding|CODING|LOC_Os05g19200.1|2|1) FN3345-S.SNP.5:11159102 chr05:011159102 0 W/11159102-11159102 FN3345-S SNP T -> C AC=1;AN=184;BQB=0.980251;DP=2710;DP4=1317,1285,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68561e-06;MQSB=0.90854;RPB=0.35258;SGB=48.7425;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.5:11162482 chr05:011162482 0 W/11162482-11162482 FN-123 Single Base Substitution T-A INTRON HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3845-S.SNP.5:11162687 chr05:011162687 0 W/11162687-11162687 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.983561;DP=2859;DP4=1511,1225,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0745016;MQB=0.767465;MQSB=1.79328e-40;RPB=0.994803;SGB=28.9929;VDB=0.694283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P50S|1564|LOC_Os05g19220|protein_coding|CODING|LOC_Os05g19220.1|4|1) FN2082-S.SNP.5:11163452 chr05:011163452 0 W/11163452-11163452 FN2082-S SNP A -> G AC=2;AN=168;BQB=0.902375;DP=3110;DP4=1492,1545,24,32;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.00836013;MQB=3.37031e-13;MQSB=4.66069e-06;RPB=0.889017;SGB=140.046;VDB=0.976579;EFF=INTRON(MODIFIER||||1564|LOC_Os05g19220|protein_coding|CODING|LOC_Os05g19220.1|4|1) FN-53.SNP.5:11164322 chr05:011164322 0 W/11164322-11164322 FN-53 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g19220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN3549-S.SNP.5:11166585 chr05:011166585 0 W/11166585-11166585 FN3549-S SNP C -> T AC=1;AN=188;BQB=0.984593;DP=4354;DP4=1654,2627,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.156638;MQB=0.105908;MQSB=0;RPB=0.120923;SGB=53.5223;VDB=0.079596;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S1217|1564|LOC_Os05g19220|protein_coding|CODING|LOC_Os05g19220.1|5|1) FN3663-S.SNP.5:11174508 chr05:011174508 0 W/11174508-11174508 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.926085;DP=2447;DP4=1431,905,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000408664;MQB=8.9337e-07;MQSB=0.0315723;RPB=0.546264;SGB=15.9981;VDB=0.489788;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G299R|880|LOC_Os05g19240|protein_coding|CODING|LOC_Os05g19240.1|3|1) FN1106-S.SNP.5:11175726 chr05:011175726 0 W/11175726-11175726 FN1106-S Single Base Substitution T-C INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN782-S.SNP.5:11180769 chr05:011180769 0 W/11180769-11180769 FN782-S Single Base Substitution T-C INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN1427-S.SNP.5:11184059 chr05:011184059 0 W/11184059-11184059 FN1427-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g19250 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN3341-S.SNP.5:11206358 chr05:011206358 0 W/11206358-11206358 FN3341-S SNP A -> T AC=2;AN=184;BQB=0.0369794;DP=2705;DP4=1448,1102,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.94475e-09;MQSB=0.850275;RPB=0.555823;SGB=-10.0179;VDB=0.381075;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.5:11210618 chr05:011210618 0 W/11210618-11210618 W598-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1650-S.SNP.5:11210714 chr05:011210714 0 W/11210714-11210714 FN1650-S Single Base Substitution C-T INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3433-S.SNP.5:11211953 chr05:011211953 0 W/11211953-11211953 FN3433-S SNP A -> C AC=2;AN=184;BQB=0.945142;DP=2503;DP4=1259,1178,6,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.1114e-07;MQSB=0.969316;RPB=0.358927;SGB=53.2642;VDB=0.74866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.5:11214221 chr05:011214221 0 W/11214221-11214221 FN1412-S Single Base Substitution C-T INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN915-S.SNP.5:11218508 chr05:011218508 0 W/11218508-11218508 FN915-S Single Base Substitution G-A INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3342-S.SNP.5:11230179 chr05:011230179 0 W/11230179-11230179 FN3342-S SNP A -> G AC=1;AN=184;BQB=0.999901;DP=3533;DP4=1580,1836,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0104727;MQB=0.12917;MQSB=0.000216174;RPB=0.981712;SGB=42.7914;VDB=0.847797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H306R|1495|LOC_Os05g19330|protein_coding|CODING|LOC_Os05g19330.1|1|1) FN495-S.SNP.5:11233075 chr05:011233075 0 W/11233075-11233075 FN495-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN1463-S.SNP.5:11237878 chr05:011237878 0 W/11237878-11237878 FN1463-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os05g19350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN_546-3-1.SNP.5:11252265 chr05:011252265 0 W/11252265-11252265 FN_546-3-1 Single Base Substitution A-C Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1120-S.SNP.5:11252672 chr05:011252672 0 W/11252672-11252672 FN1120-S Single Base Substitution A-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN_786-4-1.SNP.5:11256948 chr05:011256948 0 W/11256948-11256948 FN_786-4-1 Single Base Substitution G-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3713-S.SNP.5:11273442 chr05:011273442 0 W/11273442-11273442 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.516867;DP=3098;DP4=1700,1316,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.181085;MQB=0.82985;MQSB=0.0260331;RPB=0.993822;SGB=49.0954;VDB=0.342279;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H301|1524|LOC_Os05g19410|protein_coding|CODING|LOC_Os05g19410.1|1|1) FN1195-S.SNP.5:11273821 chr05:011273821 0 W/11273821-11273821 FN1195-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g19410 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3384-S.SNP.5:11278407 chr05:011278407 0 W/11278407-11278407 FN3384-S SNP C -> A AC=1;AN=184;BQB=0.998507;DP=2838;DP4=1514,1186,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000160155;MQSB=0.813264;RPB=0.663886;SGB=25.1826;VDB=0.0971011;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.5:11296794 chr05:011296794 0 W/11296794-11296794 FN1745-S SNP G -> A AC=2;AN=188;BQB=0.146529;DP=3220;DP4=1201,1959,12,24;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0158385;MQB=0.000163972;MQSB=4.97593e-05;RPB=0.409899;SGB=-85.2098;VDB=0.492674;EFF=INTRON(MODIFIER||||236|LOC_Os05g19440|protein_coding|CODING|LOC_Os05g19440.1|1|1) FN2782-S.SNP.5:11297071 chr05:011297071 0 W/11297071-11297071 FN2782-S SNP T -> C AC=2;AN=198;BQB=0.979465;DP=4785;DP4=2372,2050,15,31;HOB=0.019998;ICB=0.495001;MQ=23;MQ0F=0.240125;MQB=2.31006e-05;MQSB=0;RPB=0.98115;SGB=155.193;VDB=0.621866;EFF=INTRON(MODIFIER||||236|LOC_Os05g19440|protein_coding|CODING|LOC_Os05g19440.1|1|1) FN1071-S.SNP.5:11301920 chr05:011301920 0 W/11301920-11301920 FN1071-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g19450 retrotransposon protein, putative, unclassified, expressed SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN4173-S.SNP.5:11301980 chr05:011301980 0 W/11301980-11301980 FN4173-S SNP C -> T AC=1;AN=170;BQB=0.97645;DP=2778;DP4=1525,1179,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.011879;MQB=1.00928e-05;MQSB=0.0286618;RPB=0.244654;SGB=24.5502;VDB=0.042897;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G127S|604|LOC_Os05g19450|protein_coding|CODING|LOC_Os05g19450.1|2|1) FN4173-S.SNP.5:11301981 chr05:011301981 0 W/11301981-11301981 FN4173-S SNP A -> T AC=1;AN=170;BQB=0.755216;DP=2789;DP4=1547,1133,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0118322;MQB=0.000183987;MQSB=0.0186877;RPB=0.294738;SGB=24.5502;VDB=0.0711853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S126R|604|LOC_Os05g19450|protein_coding|CODING|LOC_Os05g19450.1|2|1) FN2207-S.SNP.5:11304025 chr05:011304025 0 W/11304025-11304025 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.959614;DP=4667;DP4=2165,2235,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13673e-09;MQSB=0.960345;RPB=0.671979;SGB=64.5316;VDB=0.590314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.5:11304758 chr05:011304758 0 W/11304758-11304758 FN3948-S SNP G -> A AC=1;AN=168;BQB=0.520654;DP=2875;DP4=1307,1466,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00278261;MQB=1.98834e-08;MQSB=0.0832092;RPB=0.891722;SGB=51.902;VDB=0.951976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.5:11304759 chr05:011304759 0 W/11304759-11304759 FN3948-S SNP G -> A AC=1;AN=168;BQB=0.999951;DP=2872;DP4=1294,1492,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0031337;MQB=7.40189e-09;MQSB=0.116002;RPB=0.720274;SGB=65.4653;VDB=0.951336;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.5:11305981 chr05:011305981 0 W/11305981-11305981 FN812-S Single Base Substitution G-C INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2676-S.SNP.5:11308645 chr05:011308645 0 W/11308645-11308645 FN2676-S SNP G -> T AC=1;AN=200;BQB=0.941702;DP=4860;DP4=2182,2368,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205761;MQB=7.39026e-08;MQSB=0.930604;RPB=0.908883;SGB=54.6902;VDB=0.225062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.5:11309099 chr05:011309099 0 W/11309099-11309099 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.84285;DP=4212;DP4=1691,2197,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0168566;MQB=0.856861;MQSB=5.27238e-07;RPB=0.713257;SGB=-12.0504;VDB=0.241952;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.5:11310034 chr05:011310034 0 W/11310034-11310034 FN403-S Single Base Substitution A-G INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN932-S.SNP.5:11313286 chr05:011313286 0 W/11313286-11313286 FN932-S Single Base Substitution G-A INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN3427-S.SNP.5:11315546 chr05:011315546 0 W/11315546-11315546 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.978587;DP=3225;DP4=1611,1543,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.30962e-08;MQSB=0.999699;RPB=0.312895;SGB=57.786;VDB=0.353483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M28I|170|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.4|2|1),INTRON(MODIFIER||||205|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.1|1|1),INTRON(MODIFIER||||205|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.2|1|1),INTRON(MODIFIER||||174|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.3|1|1),INTRON(MODIFIER||||93|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.6|1|1),INTRON(MODIFIER||||85|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.7|1|1),INTRON(MODIFIER||||123|LOC_Os05g19470|protein_coding|CODING|LOC_Os05g19470.5|1|1) FN_949-1.SNP.5:11321037 chr05:011321037 0 W/11321037-11321037 FN_949-1 Single Base Substitution A-C Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN783-S.SNP.5:11322773 chr05:011322773 0 W/11322773-11322773 FN783-S Single Base Substitution A-G INTRON HOMO SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2434.SNP.5:11327577 chr05:011327577 0 W/11327577-11327577 FN2434 SNP G -> A AC=1;AN=200;BQB=0.962121;DP=3907;DP4=1556,2162,3,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000255951;MQB=0.00829144;MQSB=0.632027;RPB=0.431138;SGB=26.6347;VDB=0.624012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.5:11332436 chr05:011332436 0 W/11332436-11332436 FN1108-S Single Base Substitution A-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3347-S.SNP.5:11335147 chr05:011335147 0 W/11335147-11335147 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.30031;DP=3569;DP4=1981,1468,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.12334e-09;MQSB=0.93902;RPB=0.995585;SGB=45.9712;VDB=0.975173;EFF=UTR_5_PRIME(MODIFIER||389||722|LOC_Os05g19500|protein_coding|CODING|LOC_Os05g19500.2|1|1),UTR_5_PRIME(MODIFIER||66||790|LOC_Os05g19500|protein_coding|CODING|LOC_Os05g19500.1|1|1) FN3319-S.SNP.5:11336547 chr05:011336547 0 W/11336547-11336547 FN3319-S SNP G -> C AC=1;AN=184;BQB=0.878916;DP=3919;DP4=1979,1822,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.3994e-13;MQSB=0.968446;RPB=0.982241;SGB=60.4004;VDB=0.887511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A338P|722|LOC_Os05g19500|protein_coding|CODING|LOC_Os05g19500.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A406P|790|LOC_Os05g19500|protein_coding|CODING|LOC_Os05g19500.1|2|1) FN1301-S.SNP.5:11343911 chr05:011343911 0 W/11343911-11343911 FN1301-S Single Base Substitution G-A INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN776-S.SNP.5:11344661 chr05:011344661 0 W/11344661-11344661 FN776-S Single Base Substitution T-G INTRON HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1625-S.SNP.5:11346490 chr05:011346490 0 W/11346490-11346490 FN1625-S Single Base Substitution G-T INTRON HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.5:11346490 chr05:011346490 0 W/11346490-11346490 FN1626-S SNP G -> T AC=1;AN=188;BQB=0.147318;DP=3362;DP4=521,2801,5,26;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.15348;MQB=0.515185;MQSB=2.35457e-12;RPB=0.498172;SGB=-149.002;VDB=0.0107228;EFF=INTRON(MODIFIER||||269|LOC_Os05g19520|protein_coding|CODING|LOC_Os05g19520.1|1|1) FN732-S.SNP.5:11350776 chr05:011350776 0 W/11350776-11350776 FN732-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g19530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN1080-S.SNP.5:11352027 chr05:011352027 0 W/11352027-11352027 FN1080-S Single Base Substitution G-A INTRON HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3376-S.SNP.5:11352434 chr05:011352434 0 W/11352434-11352434 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.99784;DP=3498;DP4=1465,1934,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000285878;MQB=5.04281e-10;MQSB=0.256508;RPB=0.366345;SGB=75.8731;VDB=0.0518963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G16D|960|LOC_Os05g19530|protein_coding|CODING|LOC_Os05g19530.1|1|1) FN-306.SNP.5:11372690 chr05:011372690 0 W/11372690-11372690 FN-306 Single Base Substitution G-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN3974-S.SNP.5:11376525 chr05:011376525 0 W/11376525-11376525 FN3974-S SNP T -> A AC=1;AN=168;BQB=0.987137;DP=2786;DP4=1288,1351,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00107681;MQB=4.912e-05;MQSB=0.976949;RPB=0.928068;SGB=27.8864;VDB=0.919544;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N618K|1263|LOC_Os05g19550|protein_coding|CODING|LOC_Os05g19550.1|4|1) FN1533-S.SNP.5:11377491 chr05:011377491 0 W/11377491-11377491 FN1533-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1319-S.SNP.5:11379172 chr05:011379172 0 W/11379172-11379172 FN1319-S Single Base Substitution G-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2583-S.SNP.5:11382103 chr05:011382103 0 W/11382103-11382103 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.895441;DP=4796;DP4=2357,2174,9,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00125104;MQB=2.04817e-09;MQSB=0.851655;RPB=0.238046;SGB=47.4799;VDB=0.22877;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1901|1943|LOC_Os05g19560|protein_coding|CODING|LOC_Os05g19560.1|4|1) FN2359.SNP.5:11388458 chr05:011388458 0 W/11388458-11388458 FN2359 SNP G -> A AC=1;AN=192;BQB=0.210309;DP=6485;DP4=2685,3281,20,13;HOB=5.42535e-05;ICB=0.000109072;MQ=21;MQ0F=0.25027;MQB=0.145233;MQSB=2.66328e-19;RPB=0.984687;SGB=-5.17475;VDB=0.602694;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q64*|1943|LOC_Os05g19560|protein_coding|CODING|LOC_Os05g19560.1|2|1);LOF=(LOC_Os05g19560|LOC_Os05g19560|1|1.00);NMD=(LOC_Os05g19560|LOC_Os05g19560|1|1.00) FN2612-S.SNP.5:11399637 chr05:011399637 0 W/11399637-11399637 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.733358;DP=4210;DP4=1866,2116,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.84333e-10;MQSB=0.469326;RPB=0.339643;SGB=34.5346;VDB=0.892357;EFF=INTERGENIC(MODIFIER||||||||||1) FN-9.SNP.5:11400344 chr05:011400344 0 W/11400344-11400344 FN-9 Single Base Substitution T-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN4177-S.SNP.5:11400816 chr05:011400816 0 W/11400816-11400816 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.994711;DP=1925;DP4=1003,865,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.40353e-08;MQSB=0.847349;RPB=0.64405;SGB=61.2001;VDB=0.799082;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.5:11404211 chr05:011404211 0 W/11404211-11404211 FN4104-S SNP C -> G AC=1;AN=182;BQB=0.922611;DP=3147;DP4=1636,1448,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.49202e-10;MQSB=0.985659;RPB=0.360373;SGB=42.6494;VDB=0.268087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.5:11405339 chr05:011405339 0 W/11405339-11405339 FN3627-S SNP C -> A AC=1;AN=190;BQB=0.888023;DP=2755;DP4=1336,1321,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.2312e-06;MQSB=0.0480972;RPB=0.919742;SGB=67.3108;VDB=0.400749;EFF=INTRON(MODIFIER||||429|LOC_Os05g19580|protein_coding|CODING|LOC_Os05g19580.1|3|1) FN1685-S.SNP.5:11406703 chr05:011406703 0 W/11406703-11406703 FN1685-S SNP A -> G AC=1;AN=188;BQB=0.999851;DP=3722;DP4=1755,1932,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.44649e-11;MQSB=0.904862;RPB=1;SGB=13.2547;VDB=0.136665;EFF=INTRON(MODIFIER||||429|LOC_Os05g19580|protein_coding|CODING|LOC_Os05g19580.1|6|1) FN1024-S.SNP.5:11407881 chr05:011407881 0 W/11407881-11407881 FN1024-S Single Base Substitution C-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN619-S.SNP.5:11412581 chr05:011412581 0 W/11412581-11412581 FN619-S Single Base Substitution G-A INTERGENIC HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN2172-S.SNP.5:11414416 chr05:011414416 0 W/11414416-11414416 FN2172-S SNP G -> A AC=1;AN=168;BQB=0.0005742;DP=3744;DP4=1822,1878,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.91553e-06;MQSB=0.957871;RPB=0.999323;SGB=-92.9238;VDB=0.814331;EFF=INTRON(MODIFIER||||481|LOC_Os05g19590|protein_coding|CODING|LOC_Os05g19590.1|5|1) FN1573-S.SNP.5:11425996 chr05:011425996 0 W/11425996-11425996 FN1573-S Single Base Substitution C-T INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN-74.SNP.5:11427587 chr05:011427587 0 W/11427587-11427587 FN-74 Single Base Substitution G-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1158-S.SNP.5:11434443 chr05:011434443 0 W/11434443-11434443 FN1158-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g19620 expressed protein SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN581-S.SNP.5:11437976 chr05:011437976 0 W/11437976-11437976 FN581-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3928-S.SNP.5:11445843 chr05:011445843 0 W/11445843-11445843 FN3928-S SNP C -> A AC=1;AN=158;BQB=0.960481;DP=2365;DP4=1255,1005,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.78875e-08;MQSB=0.998722;RPB=0.240454;SGB=55.806;VDB=0.215711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.5:11451935 chr05:011451935 0 W/11451935-11451935 FN3809-S SNP C -> T AC=1;AN=190;BQB=0.442445;DP=2816;DP4=1369,1355,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65162e-06;MQSB=0.951078;RPB=0.992569;SGB=32.5467;VDB=0.489788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.5:11454773 chr05:011454773 0 W/11454773-11454773 FN1180-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3456-S.SNP.5:11472987 chr05:011472987 0 W/11472987-11472987 FN3456-S SNP C -> G AC=1;AN=184;BQB=0.943707;DP=3565;DP4=1496,2001,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17121e-08;MQSB=0.813318;RPB=0.660281;SGB=35.7479;VDB=0.773567;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.5:11473611 chr05:011473611 0 W/11473611-11473611 FN355-S Single Base Substitution C-T INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN1559-S.SNP.5:11477980 chr05:011477980 0 W/11477980-11477980 FN1559-S Single Base Substitution G-C INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1493-S.SNP.5:11478810 chr05:011478810 0 W/11478810-11478810 FN1493-S Single Base Substitution T-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2083-S.SNP.5:11479422 chr05:011479422 0 W/11479422-11479422 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.636966;DP=4211;DP4=2062,1994,40,82;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.57922;RPB=4.143e-25;SGB=-2983.93;VDB=9.59992e-36;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.5:11479438 chr05:011479438 0 W/11479438-11479438 FN2083-S SNP A -> T AC=1;AN=168;BQB=0.0073652;DP=4291;DP4=2019,2077,46,124;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.217476;RPB=6.49077e-23;SGB=-3165.31;VDB=2.92957e-20;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.5:11483208 chr05:011483208 0 W/11483208-11483208 FN1206-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN1738-S.SNP.5:11483626 chr05:011483626 0 W/11483626-11483626 FN1738-S SNP C -> T AC=2;AN=188;BQB=0.996092;DP=3181;DP4=1311,1812,16,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.04227e-24;MQSB=0.99927;RPB=0.69105;SGB=0.212494;VDB=0.496156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.5:11489228 chr05:011489228 0 W/11489228-11489228 FN1270-S Single Base Substitution A-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1299-S.SNP.5:11502226 chr05:011502226 0 W/11502226-11502226 FN1299-S Single Base Substitution G-C INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3526-S.SNP.5:11505565 chr05:011505565 0 W/11505565-11505565 FN3526-S SNP C -> T AC=2;AN=188;BQB=0.999189;DP=4344;DP4=2205,2005,14,18;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.035221;MQB=0.00013842;MQSB=0.503888;RPB=0.827258;SGB=103.307;VDB=0.935027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.5:11506852 chr05:011506852 0 W/11506852-11506852 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.952471;DP=5554;DP4=2415,2903,10,11;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.217321;MQB=0.988258;MQSB=1.07436e-06;RPB=0.942735;SGB=91.1059;VDB=0.978072;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.5:11508056 chr05:011508056 0 W/11508056-11508056 FN-219 Single Base Substitution G-A INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. W470-2-1.SNP.5:11519554 chr05:011519554 0 W/11519554-11519554 W470-2-1 Single Base Substitution G-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN980-S.SNP.5:11521832 chr05:011521832 0 W/11521832-11521832 FN980-S Single Base Substitution C-T INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1027-S.SNP.5:11523028 chr05:011523028 0 W/11523028-11523028 FN1027-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g19750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1027-S.SNP.5:11523029 chr05:011523029 0 W/11523029-11523029 FN1027-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g19750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN-101.SNP.5:11525573 chr05:011525573 0 W/11525573-11525573 FN-101 Single Base Substitution G-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN738-S.SNP.5:11525906 chr05:011525906 0 W/11525906-11525906 FN738-S Single Base Substitution C-T INTRON HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN1501-S.SNP.5:11527925 chr05:011527925 0 W/11527925-11527925 FN1501-S Single Base Substitution G-T INTRON HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3345-S.SNP.5:11528309 chr05:011528309 0 W/11528309-11528309 FN3345-S SNP G -> T AC=2;AN=184;BQB=0.978152;DP=3328;DP4=1451,1755,15,16;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0201322;MQB=0.000594834;MQSB=0.418094;RPB=0.977873;SGB=134.656;VDB=0.439936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P212H|1037|LOC_Os05g19750|protein_coding|CODING|LOC_Os05g19750.1|1|1) FN725-S.SNP.5:11528309 chr05:011528309 0 W/11528309-11528309 FN725-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g19750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN-139.SNP.5:11530442 chr05:011530442 0 W/11530442-11530442 FN-139 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN-139.SNP.5:11530447 chr05:011530447 0 W/11530447-11530447 FN-139 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g19764 retrotransposon protein, putative, unclassified, expressed SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3715-S.SNP.5:11533062 chr05:011533062 0 W/11533062-11533062 FN3715-S SNP C -> T AC=2;AN=190;BQB=0.793447;DP=2406;DP4=1011,1253,18,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81748e-24;MQSB=0.159927;RPB=0.977584;SGB=166.845;VDB=0.346596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.5:11548159 chr05:011548159 0 W/11548159-11548159 FN3476-S SNP C -> G AC=2;AN=184;BQB=0.92786;DP=2995;DP4=1585,1309,26,17;HOB=0.0215028;ICB=0.494625;MQ=30;MQ0F=0.159933;MQB=0.837114;MQSB=6.17594e-30;RPB=0.197128;SGB=141.402;VDB=0.394426;EFF=INTRON(MODIFIER||||124|LOC_Os05g19820|protein_coding|CODING|LOC_Os05g19820.1|1|1) FN1106-S.SNP.5:11548585 chr05:011548585 0 W/11548585-11548585 FN1106-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g19820 retrotransposon protein, putative, unclassified SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN4080-S.SNP.5:11551864 chr05:011551864 0 W/11551864-11551864 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.971494;DP=3202;DP4=1669,1444,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=22;MQ0F=0.0827608;MQB=0.989113;MQSB=9.42659e-05;RPB=0.821646;SGB=53.1331;VDB=0.504036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.5:11555112 chr05:011555112 0 W/11555112-11555112 FN2355 SNP G -> T AC=1;AN=192;BQB=0.441952;DP=7697;DP4=3012,4240,10,34;HOB=5.42535e-05;ICB=0.000109072;MQ=12;MQ0F=0.397817;MQB=0.041842;MQSB=0;RPB=0.982803;SGB=-144.644;VDB=0.94582;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.5:11558713 chr05:011558713 0 W/11558713-11558713 FN3399-S SNP G -> C AC=1;AN=184;BQB=0.995462;DP=5658;DP4=3649,1898,13,22;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0427713;MQB=0.562127;MQSB=0;RPB=0.181147;SGB=73.7109;VDB=0.0888155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R617P|1773|LOC_Os05g19850|protein_coding|CODING|LOC_Os05g19850.1|3|1) FN563-S.SNP.5:11560531 chr05:011560531 0 W/11560531-11560531 FN563-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g19850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN771-S.SNP.5:11560655 chr05:011560655 0 W/11560655-11560655 FN771-S Single Base Substitution T-A STOP_GAINED HOMO LOC_Os05g19850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2403.SNP.5:11571564 chr05:011571564 0 W/11571564-11571564 FN2403 SNP C -> G AC=1;AN=200;BQB=0.625853;DP=4571;DP4=2046,2242,10,5;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0761321;MQB=0.0148973;MQSB=2.17976e-31;RPB=0.504931;SGB=4.67442;VDB=0.911408;EFF=INTRON(MODIFIER||||153|LOC_Os05g19860|protein_coding|CODING|LOC_Os05g19860.1|1|1) FN1340-S.SNP.5:11576164 chr05:011576164 0 W/11576164-11576164 FN1340-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g19870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1723-S.SNP.5:11595384 chr05:011595384 0 W/11595384-11595384 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.6844;DP=3447;DP4=2070,1324,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000580215;MQB=1.44403e-08;MQSB=1.07303e-09;RPB=0.64223;SGB=-38.7347;VDB=0.61122;EFF=INTRON(MODIFIER||||1689|LOC_Os05g19900|protein_coding|CODING|LOC_Os05g19900.1|2|1) FN835-S.SNP.5:11601972 chr05:011601972 0 W/11601972-11601972 FN835-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g19900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-37.SNP.5:11611044 chr05:011611044 0 W/11611044-11611044 FN-37 Single Base Substitution T-C INTRON Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN2165-S.SNP.5:11623533 chr05:011623533 0 W/11623533-11623533 FN2165-S SNP G -> A AC=1;AN=168;BQB=0.158656;DP=2083;DP4=1291,705,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00550622;MQSB=0.688206;RPB=0.57581;SGB=-17.9574;VDB=0.971364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.5:11625697 chr05:011625697 0 W/11625697-11625697 FN3866-S SNP T -> A AC=2;AN=158;BQB=0.926579;DP=2853;DP4=1580,1126,14,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.34075e-10;MQSB=0.606327;RPB=0.247198;SGB=95.131;VDB=0.709518;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.5:11632087 chr05:011632087 0 W/11632087-11632087 FN414-S Single Base Substitution T-G INTRON HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN3434-S.SNP.5:11635879 chr05:011635879 0 W/11635879-11635879 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.883719;DP=3470;DP4=1380,1999,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.074928;MQB=0.970017;MQSB=0;RPB=0.535099;SGB=75.8731;VDB=0.881934;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.5:11644980 chr05:011644980 0 W/11644980-11644980 FN722-S Single Base Substitution A-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN722-S.SNP.5:11644981 chr05:011644981 0 W/11644981-11644981 FN722-S Single Base Substitution C-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN973-S.SNP.5:11645538 chr05:011645538 0 W/11645538-11645538 FN973-S Single Base Substitution G-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN973-S.SNP.5:11645539 chr05:011645539 0 W/11645539-11645539 FN973-S Single Base Substitution C-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3630-S.SNP.5:11657116 chr05:011657116 0 W/11657116-11657116 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.978434;DP=3102;DP4=1601,1369,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.02919e-05;MQSB=0.997962;RPB=0.665061;SGB=35.4339;VDB=0.876592;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.5:11659413 chr05:011659413 0 W/11659413-11659413 FN-311 Single Base Substitution G-A INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN4084-S.SNP.5:11659817 chr05:011659817 0 W/11659817-11659817 FN4084-S SNP T -> G AC=1;AN=182;BQB=0.937781;DP=3192;DP4=1498,1582,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.60698e-10;MQSB=0.98754;RPB=0.976558;SGB=62.1548;VDB=0.186494;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.5:11663551 chr05:011663551 0 W/11663551-11663551 FN745-S Single Base Substitution C-A INTRON HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN436-S.SNP.5:11689049 chr05:011689049 0 W/11689049-11689049 FN436-S Single Base Substitution G-A INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2625-S.SNP.5:11689154 chr05:011689154 0 W/11689154-11689154 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.613242;DP=4960;DP4=2162,2433,8,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00100806;MQB=4.17331e-05;MQSB=4.81936e-08;RPB=0.997788;SGB=17.5158;VDB=0.999515;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.5:11689606 chr05:011689606 0 W/11689606-11689606 FN895-S Single Base Substitution T-C INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN4088-S.SNP.5:11694600 chr05:011694600 0 W/11694600-11694600 FN4088-S SNP T -> A AC=2;AN=182;BQB=0.502494;DP=3286;DP4=1495,1644,10,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.68973e-08;MQSB=0.777643;RPB=0.989778;SGB=14.2148;VDB=0.861596;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.5:11697104 chr05:011697104 0 W/11697104-11697104 FN487-S Single Base Substitution G-T INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN-175.SNP.5:11700425 chr05:011700425 0 W/11700425-11700425 FN-175 Single Base Substitution C-A INTRON HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN817-S.SNP.5:11704581 chr05:011704581 0 W/11704581-11704581 FN817-S Single Base Substitution G-A INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN470-S.SNP.5:11705210 chr05:011705210 0 W/11705210-11705210 FN470-S Single Base Substitution G-A INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN-370.SNP.5:11705248 chr05:011705248 0 W/11705248-11705248 FN-370 Single Base Substitution A-G INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN580-S.SNP.5:11706458 chr05:011706458 0 W/11706458-11706458 FN580-S Single Base Substitution C-G INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3345-S.SNP.5:11709835 chr05:011709835 0 W/11709835-11709835 FN3345-S SNP G -> T AC=1;AN=184;BQB=0.780099;DP=2896;DP4=1323,1395,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.87275e-06;MQSB=0.881215;RPB=0.915337;SGB=13.188;VDB=0.539478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.5:11715263 chr05:011715263 0 W/11715263-11715263 FN1158-S Single Base Substitution C-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2465.SNP.5:11716966 chr05:011716966 0 W/11716966-11716966 FN2465 SNP G -> A AC=1;AN=200;BQB=0.186986;DP=4596;DP4=2129,2103,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77227e-11;MQSB=0.922956;RPB=0.343919;SGB=45.1159;VDB=0.945099;EFF=INTRON(MODIFIER||||147|LOC_Os05g20039|protein_coding|CODING|LOC_Os05g20039.1|1|1) FN1233-S.SNP.5:11718283 chr05:011718283 0 W/11718283-11718283 FN1233-S Single Base Substitution G-C INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN496-S.SNP.5:11718283 chr05:011718283 0 W/11718283-11718283 FN496-S Single Base Substitution G-C INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2670-S.SNP.5:11719563 chr05:011719563 0 W/11719563-11719563 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.956443;DP=4343;DP4=1622,2357,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95658e-10;MQSB=0.561524;RPB=0.931563;SGB=34.6953;VDB=0.389632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1249-S.SNP.5:11728068 chr05:011728068 0 W/11728068-11728068 FN1249-S Single Base Substitution T-C INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2091-S.SNP.5:11728280 chr05:011728280 0 W/11728280-11728280 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.558279;DP=3727;DP4=1611,2047,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00402468;MQB=0.00342926;MQSB=4.38334e-06;RPB=0.97872;SGB=-12.3568;VDB=0.442892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.5:11729884 chr05:011729884 0 W/11729884-11729884 FN3915-S SNP T -> C AC=1;AN=158;BQB=0.956027;DP=3247;DP4=1579,1561,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0246381;MQB=0.000355138;MQSB=1.47803e-40;RPB=0.656316;SGB=21.4493;VDB=0.665504;EFF=INTRON(MODIFIER||||119|LOC_Os05g20060|protein_coding|CODING|LOC_Os05g20060.1|2|1) FN3915-S.SNP.5:11729885 chr05:011729885 0 W/11729885-11729885 FN3915-S SNP G -> T AC=1;AN=158;BQB=0.693038;DP=3227;DP4=1571,1557,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0232414;MQB=1.60391e-05;MQSB=1.10954e-38;RPB=0.151552;SGB=21.4493;VDB=0.484758;EFF=INTRON(MODIFIER||||119|LOC_Os05g20060|protein_coding|CODING|LOC_Os05g20060.1|2|1) FN3373-S.SNP.5:11730772 chr05:011730772 0 W/11730772-11730772 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.753075;DP=3318;DP4=1471,1680,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.12417e-08;MQSB=0.945466;RPB=0.392671;SGB=56.8786;VDB=0.368855;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.5:11732445 chr05:011732445 0 W/11732445-11732445 FN514-S Single Base Substitution C-A INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-287.SNP.5:11732895 chr05:011732895 0 W/11732895-11732895 FN-287 Single Base Substitution T-G INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN3517-S.SNP.5:11743402 chr05:011743402 0 W/11743402-11743402 FN3517-S SNP T -> A AC=1;AN=188;BQB=0.802521;DP=3213;DP4=1604,1516,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.62885e-12;MQSB=0.90036;RPB=0.042699;SGB=46.4225;VDB=0.322726;EFF=INTRON(MODIFIER||||458|LOC_Os05g20090|protein_coding|CODING|LOC_Os05g20090.1|5|1) FN1035-S.SNP.5:11749525 chr05:011749525 0 W/11749525-11749525 FN1035-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2291.SNP.5:11749525 chr05:011749525 0 W/11749525-11749525 FN2291 SNP G -> A AC=1;AN=192;BQB=0.450202;DP=2241;DP4=390,1511,3,19;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0861223;MQB=0.77913;MQSB=0;RPB=0.498612;SGB=68.2948;VDB=0.216681;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G62|458|LOC_Os05g20090|protein_coding|CODING|LOC_Os05g20090.1|1|1) FN3889-S.SNP.5:11749525 chr05:011749525 0 W/11749525-11749525 FN3889-S SNP G -> A AC=2;AN=158;BQB=0.999271;DP=960;DP4=277,551,4,7;HOB=0.024996;ICB=0.493752;MQ=34;MQ0F=0.0958333;MQB=0.811879;MQSB=5.30261e-17;RPB=0.80561;SGB=42.6978;VDB=0.768076;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G62|458|LOC_Os05g20090|protein_coding|CODING|LOC_Os05g20090.1|1|1) FN711-S.SNP.5:11749525 chr05:011749525 0 W/11749525-11749525 FN711-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2229-S.SNP.5:11751620 chr05:011751620 0 W/11751620-11751620 FN2229-S SNP G -> C AC=2;AN=190;BQB=0.244955;DP=4145;DP4=1871,1939,37,25;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.00965018;MQB=0.508354;MQSB=1.70473e-05;RPB=0.60966;SGB=235.702;VDB=0.384953;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.5:11752413 chr05:011752413 0 W/11752413-11752413 FN1075-S Single Base Substitution C-G INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1734-S.SNP.5:11753304 chr05:011753304 0 W/11753304-11753304 FN1734-S SNP C -> G AC=2;AN=188;BQB=0.590747;DP=3253;DP4=1189,2013,17,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68997e-15;MQSB=0.972599;RPB=0.972364;SGB=-86.6665;VDB=0.980294;EFF=UTR_3_PRIME(MODIFIER||194||537|LOC_Os05g20100|protein_coding|CODING|LOC_Os05g20100.1|2|1) FN1682-S.SNP.5:11756860 chr05:011756860 0 W/11756860-11756860 FN1682-S SNP A -> T AC=2;AN=188;BQB=0.211505;DP=3789;DP4=1988,1739,32,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.41146e-25;MQSB=0.953055;RPB=0.882221;SGB=-225.05;VDB=0.972702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.5:11760550 chr05:011760550 0 W/11760550-11760550 FN1237-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1583-S.SNP.5:11765545 chr05:011765545 0 W/11765545-11765545 FN1583-S Single Base Substitution T-A INTRON Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2332.SNP.5:11769080 chr05:011769080 0 W/11769080-11769080 FN2332 SNP A -> G AC=2;AN=192;BQB=0.587481;DP=4767;DP4=2003,2362,27,46;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.73303e-38;MQSB=0.936949;RPB=0.930414;SGB=281.026;VDB=0.786013;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.5:11769095 chr05:011769095 0 W/11769095-11769095 FN-399 Single Base Substitution C-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2731-S.SNP.5:11773449 chr05:011773449 0 W/11773449-11773449 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.950445;DP=6056;DP4=2646,3157,10,6;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.411988;MQB=0.00885754;MQSB=0;RPB=0.406865;SGB=68.0801;VDB=0.106018;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y1363H|1784|LOC_Os05g20129|protein_coding|CODING|LOC_Os05g20129.1|4|1) FN2467.SNP.5:11781102 chr05:011781102 0 W/11781102-11781102 FN2467 SNP T -> C AC=1;AN=200;BQB=0.752475;DP=4040;DP4=1953,1640,13,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.156188;MQB=0.995006;MQSB=0;RPB=0.740378;SGB=77.2904;VDB=0.936782;EFF=INTRON(MODIFIER||||1784|LOC_Os05g20129|protein_coding|CODING|LOC_Os05g20129.1|1|1) FN3872-S.SNP.5:11783124 chr05:011783124 0 W/11783124-11783124 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.972186;DP=2563;DP4=1237,1248,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.45311e-07;MQSB=0.937778;RPB=0.848969;SGB=38.3284;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.5:11786374 chr05:011786374 0 W/11786374-11786374 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.948323;DP=2518;DP4=1212,1191,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.83271e-10;MQSB=0.959148;RPB=0.964186;SGB=82.0227;VDB=0.899778;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.5:11788524 chr05:011788524 0 W/11788524-11788524 FN3860-S SNP C -> A AC=2;AN=158;BQB=0.87456;DP=2458;DP4=1157,1174,19,16;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.1496e-21;MQSB=9.48358e-05;RPB=0.723141;SGB=108.201;VDB=0.712892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.5:11788525 chr05:011788525 0 W/11788525-11788525 FN3860-S SNP C -> A AC=2;AN=158;BQB=0.285644;DP=2467;DP4=1139,1170,17,16;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.04724e-20;MQSB=0.00165515;RPB=0.71514;SGB=101.462;VDB=0.755672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.5:11789843 chr05:011789843 0 W/11789843-11789843 FN3353-S SNP G -> T AC=1;AN=184;BQB=0.997094;DP=3533;DP4=1543,1911,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.4913e-07;MQSB=0.623914;RPB=0.802739;SGB=48.7425;VDB=0.98044;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P621Q|869|LOC_Os05g20150|protein_coding|CODING|LOC_Os05g20150.1|1|1) FN3368-S.SNP.5:11792549 chr05:011792549 0 W/11792549-11792549 FN3368-S SNP C -> G AC=1;AN=184;BQB=0.726716;DP=2866;DP4=1460,1301,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.7774e-06;MQSB=0.995274;RPB=0.975778;SGB=53.2642;VDB=0.694815;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.5:11795382 chr05:011795382 0 W/11795382-11795382 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.980251;DP=4956;DP4=2109,2580,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.25533e-13;MQSB=0.997538;RPB=0.494341;SGB=19.1209;VDB=0.845885;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.5:11805419 chr05:011805419 0 W/11805419-11805419 FN1333-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3389-S.SNP.5:11807817 chr05:011807817 0 W/11807817-11807817 FN3389-S SNP T -> A AC=1;AN=184;BQB=0.997249;DP=3254;DP4=1568,1494,23,10;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.515673;MQB=0.968946;MQSB=0;RPB=0.0782257;SGB=-193.947;VDB=0.679147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.5:11812573 chr05:011812573 0 W/11812573-11812573 FN2166-S SNP G -> T AC=1;AN=168;BQB=0.0852122;DP=4838;DP4=2200,2569,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.381563;MQB=0.612624;MQSB=2.67142e-05;RPB=0.991873;SGB=-151.471;VDB=0.501056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G684V|1467|LOC_Os05g20180|protein_coding|CODING|LOC_Os05g20180.1|1|1) FN2352.SNP.5:11812580 chr05:011812580 0 W/11812580-11812580 FN2352 SNP T -> C AC=1;AN=192;BQB=0.580991;DP=7319;DP4=3061,3940,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.193606;MQB=0.0908208;MQSB=2.81206e-11;RPB=0.98975;SGB=94.8539;VDB=0.393532;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y686|1467|LOC_Os05g20180|protein_coding|CODING|LOC_Os05g20180.1|1|1) FN2599-S.SNP.5:11813285 chr05:011813285 0 W/11813285-11813285 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.880728;DP=4160;DP4=1869,1972,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.263702;MQB=0.711737;MQSB=0;RPB=0.77585;SGB=37.1297;VDB=0.638004;EFF=INTRON(MODIFIER||||1467|LOC_Os05g20180|protein_coding|CODING|LOC_Os05g20180.1|2|1) FN1379-S.SNP.5:11831603 chr05:011831603 0 W/11831603-11831603 FN1379-S Single Base Substitution C-G INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN917-S.SNP.5:11840210 chr05:011840210 0 W/11840210-11840210 FN917-S Single Base Substitution G-A INTERGENIC HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3440-S.SNP.5:11860525 chr05:011860525 0 W/11860525-11860525 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.984892;DP=2687;DP4=1471,1161,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0245627;MQB=0.000974203;MQSB=0.007765;RPB=0.945459;SGB=75.8731;VDB=0.709863;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q66*|648|LOC_Os05g20250|protein_coding|CODING|LOC_Os05g20250.1|1|1);LOF=(LOC_Os05g20250|LOC_Os05g20250|1|1.00);NMD=(LOC_Os05g20250|LOC_Os05g20250|1|1.00) FN3451-S.SNP.5:11861804 chr05:011861804 0 W/11861804-11861804 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.942267;DP=3075;DP4=1493,1508,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.190569;MQB=0.655382;MQSB=8.42959e-19;RPB=0.948049;SGB=39.699;VDB=0.0934367;EFF=INTRON(MODIFIER||||648|LOC_Os05g20250|protein_coding|CODING|LOC_Os05g20250.1|2|1) FN-120.SNP.5:11867558 chr05:011867558 0 W/11867558-11867558 FN-120 Single Base Substitution A-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2386.SNP.5:11869280 chr05:011869280 0 W/11869280-11869280 FN2386 SNP C -> A AC=2;AN=192;BQB=0.983875;DP=5002;DP4=2347,2218,32,34;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00179928;MQB=1.7867e-29;MQSB=4.52475e-07;RPB=0.967803;SGB=154.567;VDB=0.544916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.5:11869283 chr05:011869283 0 W/11869283-11869283 FN2386 SNP A -> T AC=2;AN=192;BQB=0.794056;DP=5021;DP4=2244,2377,33,35;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00179247;MQB=2.54078e-29;MQSB=5.93734e-09;RPB=0.74887;SGB=87.1366;VDB=0.364706;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.5:11871481 chr05:011871481 0 W/11871481-11871481 FN898-S Single Base Substitution C-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1184-S.SNP.5:11872751 chr05:011872751 0 W/11872751-11872751 FN1184-S Single Base Substitution G-T INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2337.SNP.5:11873285 chr05:011873285 0 W/11873285-11873285 FN2337 SNP A -> G AC=1;AN=192;BQB=0.999508;DP=4941;DP4=2348,2304,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.70115e-12;MQSB=0.993719;RPB=0.0939979;SGB=44.3;VDB=0.692142;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.5:11873349 chr05:011873349 0 W/11873349-11873349 FN3774-S SNP C -> A AC=1;AN=190;BQB=0.98961;DP=2745;DP4=1267,1390,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.88271e-07;MQSB=0.998685;RPB=0.164632;SGB=28.9929;VDB=0.453287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.5:11878608 chr05:011878608 0 W/11878608-11878608 FN-53 Single Base Substitution C-T INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2593-S.SNP.5:11884231 chr05:011884231 0 W/11884231-11884231 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.862841;DP=4251;DP4=1846,2135,4,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.1942e-09;MQSB=0.862043;RPB=0.250653;SGB=-11.4553;VDB=0.131017;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A521|586|LOC_Os05g20290|protein_coding|CODING|LOC_Os05g20290.1|2|1) FN-207.SNP.5:11894031 chr05:011894031 0 W/11894031-11894031 FN-207 Single Base Substitution C-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3440-S.SNP.5:11897357 chr05:011897357 0 W/11897357-11897357 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.939217;DP=3164;DP4=1675,1401,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00379267;MQB=0.00188379;MQSB=0.0312817;RPB=0.999391;SGB=44.2207;VDB=0.9568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.5:11899467 chr05:011899467 0 W/11899467-11899467 FN1702-S SNP T -> A AC=2;AN=188;BQB=0.135236;DP=2100;DP4=934,1127,6,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.96737e-08;MQSB=0.918331;RPB=0.653442;SGB=-12.8266;VDB=0.561812;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.5:11900675 chr05:011900675 0 W/11900675-11900675 FN-154 Single Base Substitution T-C INTERGENIC HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN395-S.SNP.5:11901912 chr05:011901912 0 W/11901912-11901912 FN395-S Single Base Substitution A-G INTERGENIC HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2403.SNP.5:11907260 chr05:011907260 0 W/11907260-11907260 FN2403 SNP C -> T AC=1;AN=200;BQB=0.717257;DP=3689;DP4=1848,1607,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.01138e-12;MQSB=0.997557;RPB=0.675742;SGB=39.9056;VDB=0.274839;EFF=INTRON(MODIFIER||||528|LOC_Os05g20310|protein_coding|CODING|LOC_Os05g20310.1|2|1) FN2298.SNP.5:11912232 chr05:011912232 0 W/11912232-11912232 FN2298 SNP C -> T AC=2;AN=192;BQB=0.738468;DP=4124;DP4=2432,1321,32,15;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=4.11533e-14;MQSB=2.41135e-28;RPB=0.983223;SGB=157.404;VDB=0.520163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.5:11912692 chr05:011912692 0 W/11912692-11912692 FN3528-S SNP G -> C AC=1;AN=188;BQB=0.85204;DP=2811;DP4=1424,1305,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00106724;MQB=1.62545e-07;MQSB=0.00952261;RPB=0.202297;SGB=76.2387;VDB=0.100036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.5:11913717 chr05:011913717 0 W/11913717-11913717 FN2422 SNP A -> T AC=2;AN=200;BQB=0.87398;DP=5010;DP4=2464,2224,27,26;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000199601;MQB=3.12018e-23;MQSB=0.994398;RPB=0.869277;SGB=65.6709;VDB=0.561802;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.5:11915610 chr05:011915610 0 W/11915610-11915610 FN-291 Single Base Substitution T-A INTRON HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN367-S.SNP.5:11916315 chr05:011916315 0 W/11916315-11916315 FN367-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g20320 expressed protein SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2330.SNP.5:11919072 chr05:011919072 0 W/11919072-11919072 FN2330 SNP A -> C AC=1;AN=192;BQB=0.123719;DP=4495;DP4=2049,2007,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00200222;MQB=0.00285587;MQSB=0.010586;RPB=0.871862;SGB=64.7304;VDB=0.0568429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D107A|1785|LOC_Os05g20330|protein_coding|CODING|LOC_Os05g20330.1|1|1) FN2146-S.SNP.5:11924424 chr05:011924424 0 W/11924424-11924424 FN2146-S SNP G -> C AC=1;AN=168;BQB=0.848502;DP=2136;DP4=1144,943,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.229869;MQB=0.766961;MQSB=0;RPB=0.721505;SGB=31.3172;VDB=0.470998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cCg|R1762P|1785|LOC_Os05g20330|protein_coding|CODING|LOC_Os05g20330.1|4|1) FN927-S.SNP.5:11925810 chr05:011925810 0 W/11925810-11925810 FN927-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN358-S.SNP.5:11925997 chr05:011925997 0 W/11925997-11925997 FN358-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g20340 retrotransposon protein, putative, unclassified, expressed SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2220-S.SNP.5:11929697 chr05:011929697 0 W/11929697-11929697 FN2220-S SNP G -> T AC=2;AN=190;BQB=0.231242;DP=4218;DP4=1974,1875,21,20;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0196776;MQB=0.0879208;MQSB=2.41923e-05;RPB=0.0715106;SGB=135.609;VDB=0.874635;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.5:11937331 chr05:011937331 0 W/11937331-11937331 FN-120 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g20360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN591-S.SNP.5:11937331 chr05:011937331 0 W/11937331-11937331 FN591-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g20360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.5:11937331 chr05:011937331 0 W/11937331-11937331 FN837-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g20360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN1645-S.SNP.5:11940801 chr05:011940801 0 W/11940801-11940801 FN1645-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g20370 retrotransposon protein, putative, unclassified, expressed SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN673-S.SNP.5:11946045 chr05:011946045 0 W/11946045-11946045 FN673-S Single Base Substitution C-T INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN3669-S.SNP.5:11951294 chr05:011951294 0 W/11951294-11951294 FN3669-S SNP A -> G AC=2;AN=190;BQB=0.83983;DP=2496;DP4=1231,1145,8,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.14227e-07;MQSB=0.853941;RPB=0.999943;SGB=36.1006;VDB=0.7838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.5:11952141 chr05:011952141 0 W/11952141-11952141 FN3656-S SNP G -> T AC=1;AN=190;BQB=0.944463;DP=2588;DP4=1244,1265,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.56466e-07;MQSB=0.973864;RPB=0.640606;SGB=28.9929;VDB=0.646442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-109.SNP.5:11954732 chr05:011954732 0 W/11954732-11954732 FN-109 Single Base Substitution G-A INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN-109.SNP.5:11954733 chr05:011954733 0 W/11954733-11954733 FN-109 Single Base Substitution G-A INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN3698-S.SNP.5:11959324 chr05:011959324 0 W/11959324-11959324 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.962451;DP=2914;DP4=1376,1404,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.16764e-09;MQSB=0.899015;RPB=0.95758;SGB=58.2031;VDB=0.252867;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.5:11961924 chr05:011961924 0 W/11961924-11961924 FN740-S Single Base Substitution A-G INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN493-S.SNP.5:11972884 chr05:011972884 0 W/11972884-11972884 FN493-S Single Base Substitution C-T INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3632-S.SNP.5:11973500 chr05:011973500 0 W/11973500-11973500 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.942623;DP=2323;DP4=1300,949,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55094e-05;MQSB=0.0748494;RPB=0.959941;SGB=39.9877;VDB=0.0677205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T42I|322|LOC_Os05g20410|protein_coding|CODING|LOC_Os05g20410.1|1|1) FN2331.SNP.5:11973984 chr05:011973984 0 W/11973984-11973984 FN2331 SNP G -> A AC=2;AN=192;BQB=0.999995;DP=5001;DP4=2350,2358,25,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.22504e-26;MQSB=0.97818;RPB=0.405139;SGB=57.4139;VDB=0.391473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V75I|322|LOC_Os05g20410|protein_coding|CODING|LOC_Os05g20410.1|2|1) FN776-S.SNP.5:11980121 chr05:011980121 0 W/11980121-11980121 FN776-S Single Base Substitution T-G INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3296-S.SNP.5:11982263 chr05:011982263 0 W/11982263-11982263 FN3296-S SNP A -> G AC=1;AN=184;BQB=0.941556;DP=3380;DP4=1885,1359,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00147929;MQB=3.64034e-05;MQSB=0.156032;RPB=0.397215;SGB=35.1773;VDB=0.378861;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.5:11988144 chr05:011988144 0 W/11988144-11988144 FN-74 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1000-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN1000-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1114-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN1114-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1634-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN1634-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2666-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN2666-S SNP G -> A AC=2;AN=200;BQB=0.969678;DP=5474;DP4=2716,2372,34,30;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0144319;MQB=4.94863e-22;MQSB=0.155848;RPB=0.793696;SGB=289.128;VDB=0.93509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P166L|1532|LOC_Os05g20430|protein_coding|CODING|LOC_Os05g20430.1|2|1) FN3657-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN3657-S SNP G -> A AC=1;AN=190;BQB=0.800175;DP=2945;DP4=1317,1502,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0112054;MQB=1.55367e-05;MQSB=0.966898;RPB=0.796278;SGB=71.6393;VDB=0.576394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P166L|1532|LOC_Os05g20430|protein_coding|CODING|LOC_Os05g20430.1|2|1) FN993-S.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 FN993-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. W138-2-1.SNP.5:11988951 chr05:011988951 0 W/11988951-11988951 W138-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1443-S.SNP.5:12000024 chr05:012000024 0 W/12000024-12000024 FN1443-S Single Base Substitution C-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2432.SNP.5:12003711 chr05:012003711 0 W/12003711-12003711 FN2432 SNP C -> T AC=2;AN=200;BQB=0.819623;DP=3889;DP4=1742,1766,16,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00102854;MQB=1.08621e-14;MQSB=0.733007;RPB=0.38524;SGB=78.9831;VDB=0.481905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A976V|1422|LOC_Os05g20450|protein_coding|CODING|LOC_Os05g20450.1|5|1) FN2671-S.SNP.5:12011365 chr05:012011365 0 W/12011365-12011365 FN2671-S SNP T -> A AC=2;AN=200;BQB=0.995858;DP=5220;DP4=2624,2339,13,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.88866e-09;MQSB=0.999649;RPB=0.997128;SGB=12.7003;VDB=0.584384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.5:12027008 chr05:012027008 0 W/12027008-12027008 FN4074-S SNP C -> T AC=1;AN=182;BQB=0.998514;DP=3956;DP4=2066,1755,13,8;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0295753;MQB=0.989614;MQSB=1.64654e-12;RPB=0.991096;SGB=89.2199;VDB=0.90075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.5:12032585 chr05:012032585 0 W/12032585-12032585 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.999987;DP=5910;DP4=3120,2437,10,12;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.263452;MQB=0.12443;MQSB=2.65476e-11;RPB=0.893621;SGB=69.1109;VDB=0.0968726;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R67|233|LOC_Os05g20500|protein_coding|CODING|LOC_Os05g20500.1|1|1) FN3354-S.SNP.5:12036974 chr05:012036974 0 W/12036974-12036974 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.735105;DP=3158;DP4=1554,1501,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.114946;MQB=0.800188;MQSB=4.89339e-05;RPB=0.931679;SGB=53.3568;VDB=0.958551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R234H|1793|LOC_Os05g20510|protein_coding|CODING|LOC_Os05g20510.1|2|1) FN1287-S.SNP.5:12051264 chr05:012051264 0 W/12051264-12051264 FN1287-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2174-S.SNP.5:12058058 chr05:012058058 0 W/12058058-12058058 FN2174-S SNP A -> T AC=1;AN=168;BQB=0.402689;DP=3754;DP4=1824,1901,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.58493e-09;MQSB=0.982526;RPB=0.983922;SGB=29.4772;VDB=0.672706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.5:12061092 chr05:012061092 0 W/12061092-12061092 FN3773-S SNP G -> A AC=1;AN=190;BQB=0.961292;DP=2756;DP4=1469,1215,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0195936;MQB=8.57974e-06;MQSB=7.04002e-06;RPB=0.994638;SGB=49.0954;VDB=0.268133;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E19|91|LOC_Os05g20550|protein_coding|CODING|LOC_Os05g20550.1|1|1) FN2462.SNP.5:12062597 chr05:012062597 0 W/12062597-12062597 FN2462 SNP G -> A AC=2;AN=200;BQB=0.0717231;DP=4726;DP4=2464,1559,22,24;HOB=0.0198;ICB=0.495051;MQ=20;MQ0F=0.237833;MQB=0.189939;MQSB=4.57876e-16;RPB=0.641438;SGB=-350.367;VDB=0.599232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.5:12065409 chr05:012065409 0 W/12065409-12065409 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3528-S.SNP.5:12079573 chr05:012079573 0 W/12079573-12079573 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.752011;DP=2841;DP4=1374,1413,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00351989;MQB=0.0120874;MQSB=2.20563e-17;RPB=0.352038;SGB=64.3306;VDB=0.314621;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.5:12081693 chr05:012081693 0 W/12081693-12081693 FN881-S Single Base Substitution T-C INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1522-S.SNP.5:12081846 chr05:012081846 0 W/12081846-12081846 FN1522-S Single Base Substitution T-A INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1522-S.SNP.5:12081847 chr05:012081847 0 W/12081847-12081847 FN1522-S Single Base Substitution A-T INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1452-S.SNP.5:12084475 chr05:012084475 0 W/12084475-12084475 FN1452-S Single Base Substitution C-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1452-S.SNP.5:12084477 chr05:012084477 0 W/12084477-12084477 FN1452-S Single Base Substitution T-C INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1215-S.SNP.5:12094055 chr05:012094055 0 W/12094055-12094055 FN1215-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1731-S.SNP.5:12095360 chr05:012095360 0 W/12095360-12095360 FN1731-S SNP G -> T AC=1;AN=188;BQB=0.844105;DP=2018;DP4=1164,806,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.25832e-09;MQSB=0.877361;RPB=0.374148;SGB=10.1681;VDB=0.94254;EFF=UTR_3_PRIME(MODIFIER||272||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.1|1|1),UTR_3_PRIME(MODIFIER||272||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.2|1|1) FN4302-S.SNP.5:12096519 chr05:012096519 0 W/12096519-12096519 FN4302-S SNP T -> A AC=1;AN=170;BQB=0.739635;DP=2593;DP4=1261,1181,13,7;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0404936;MQB=0.696097;MQSB=0.274201;RPB=0.850395;SGB=10.1031;VDB=0.639752;EFF=INTRON(MODIFIER||||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.2|1|1),INTRON(MODIFIER||||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.1|1|1) FN507-S.SNP.5:12096744 chr05:012096744 0 W/12096744-12096744 FN507-S Single Base Substitution G-T INTRON HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN2547-S.SNP.5:12097871 chr05:012097871 0 W/12097871-12097871 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.931717;DP=3988;DP4=1746,2016,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0358576;MQB=0.12439;MQSB=3.42511e-05;RPB=0.679829;SGB=11.1786;VDB=0.5;EFF=INTRON(MODIFIER||||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.2|1|1),INTRON(MODIFIER||||255|LOC_Os05g20620|protein_coding|CODING|LOC_Os05g20620.1|1|1) FN1243-S.SNP.5:12098129 chr05:012098129 0 W/12098129-12098129 FN1243-S Single Base Substitution C-G INTRON HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-313.SNP.5:12098166 chr05:012098166 0 W/12098166-12098166 FN-313 Single Base Substitution A-G INTRON HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN857-S.SNP.5:12100533 chr05:012100533 0 W/12100533-12100533 FN857-S Single Base Substitution G-A INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN857-S.SNP.5:12100536 chr05:012100536 0 W/12100536-12100536 FN857-S Single Base Substitution T-G INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN-164.SNP.5:12101969 chr05:012101969 0 W/12101969-12101969 FN-164 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-412.SNP.5:12105504 chr05:012105504 0 W/12105504-12105504 FN-412 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g20630 retrotransposon protein, putative, unclassified, expressed SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN_789-3-1.SNP.5:12105784 chr05:012105784 0 W/12105784-12105784 FN_789-3-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2138-S.SNP.5:12110483 chr05:012110483 0 W/12110483-12110483 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.766912;DP=1307;DP4=494,741,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.47774e-05;MQSB=0.835815;RPB=0.976304;SGB=10.0307;VDB=0.977905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.5:12110753 chr05:012110753 0 W/12110753-12110753 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.0594959;DP=3957;DP4=1825,1513,1,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90655e-05;MQSB=0.135858;RPB=0.0925452;SGB=-33.7362;VDB=0.345514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.5:12111404 chr05:012111404 0 W/12111404-12111404 FN3730-S SNP C -> A AC=2;AN=190;BQB=0.612902;DP=2849;DP4=1835,841,25,20;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.034047;MQB=0.798001;MQSB=3.3405e-12;RPB=0.526893;SGB=139.86;VDB=0.997325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.5:12112153 chr05:012112153 0 W/12112153-12112153 FN1389-S Single Base Substitution G-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3877-S.SNP.5:12112183 chr05:012112183 0 W/12112183-12112183 FN3877-S SNP G -> C AC=1;AN=158;BQB=0.792484;DP=3102;DP4=1242,1729,15,38;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.00934881;MQB=5.52251e-13;MQSB=0;RPB=0.0148514;SGB=-748.958;VDB=0.99963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.5:12119439 chr05:012119439 0 W/12119439-12119439 FN2674-S SNP C -> A AC=1;AN=200;BQB=0.31555;DP=5202;DP4=2847,2127,11,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.17879e-07;MQSB=0.689123;RPB=0.671342;SGB=63.4749;VDB=0.742815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q231K|262|LOC_Os05g20670|protein_coding|CODING|LOC_Os05g20670.1|1|1) FN-71.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN-71 Single Base Substitution C-T INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN1093-S Single Base Substitution C-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1158-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN1158-S Single Base Substitution C-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN1410-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN1410-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2279-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.964721;DP=4811;DP4=2147,2271,20,22;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.175223;MQB=0.970113;MQSB=0.0019048;RPB=0.277193;SGB=185.712;VDB=0.125936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN2486 SNP C -> T AC=2;AN=200;BQB=0.956758;DP=4825;DP4=2199,2325,22,20;HOB=0.0198;ICB=0.495051;MQ=33;MQ0F=0.162694;MQB=0.708307;MQSB=1.75459e-09;RPB=0.104422;SGB=141.214;VDB=0.225481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN3345-S SNP C -> T AC=2;AN=184;BQB=0.716638;DP=3980;DP4=2164,1691,15,19;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.164573;MQB=0.999051;MQSB=1.66068e-35;RPB=0.919357;SGB=148.222;VDB=0.568353;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN3463-S SNP C -> T AC=1;AN=184;BQB=0.88673;DP=3826;DP4=2112,1624,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.153685;MQB=0.971701;MQSB=6.67302e-34;RPB=0.998139;SGB=62.3078;VDB=0.177657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.88813;DP=3386;DP4=1907,1336,34,21;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.170703;MQB=0.938259;MQSB=4.82896e-28;RPB=0.99475;SGB=239.371;VDB=0.918197;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.994956;DP=3446;DP4=1960,1361,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.175276;MQB=0.944605;MQSB=7.15259e-30;RPB=0.768904;SGB=93.0718;VDB=0.475567;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN627-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN627-S Single Base Substitution C-T INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN725-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN725-S Single Base Substitution C-T INTERGENIC HOMO SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN836-S.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN836-S Single Base Substitution C-T INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN_812-4-1.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 FN_812-4-1 Single Base Substitution C-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.5:12122345 chr05:012122345 0 W/12122345-12122345 W453-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2364.SNP.5:12123423 chr05:012123423 0 W/12123423-12123423 FN2364 SNP C -> T AC=2;AN=192;BQB=0.613121;DP=4292;DP4=1705,2146,10,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.62052e-15;MQSB=0.779797;RPB=0.568178;SGB=131.369;VDB=0.817792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.5:12124653 chr05:012124653 0 W/12124653-12124653 FN1061-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3565-S.SNP.5:12127710 chr05:012127710 0 W/12127710-12127710 FN3565-S SNP C -> A AC=1;AN=188;BQB=0.961504;DP=2980;DP4=1465,1460,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0124161;MQB=0.0393921;MQSB=0.000417948;RPB=0.158419;SGB=35.3493;VDB=0.885341;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G7V|759|LOC_Os05g20680|protein_coding|CODING|LOC_Os05g20680.1|1|1) FN1197-S.SNP.5:12129432 chr05:012129432 0 W/12129432-12129432 FN1197-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2648-S.SNP.5:12129925 chr05:012129925 0 W/12129925-12129925 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.998229;DP=5181;DP4=2680,2144,10,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00463231;MQB=2.52616e-11;MQSB=0.389588;RPB=0.118862;SGB=22.3313;VDB=0.10554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.5:12135544 chr05:012135544 0 W/12135544-12135544 FN3566-S SNP C -> T AC=1;AN=188;BQB=0.954988;DP=2881;DP4=1538,1245,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00173551;MQB=8.25918e-10;MQSB=0.931935;RPB=0.998893;SGB=53.7007;VDB=0.845302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.5:12136281 chr05:012136281 0 W/12136281-12136281 FN2462 SNP G -> T AC=2;AN=200;BQB=0.989749;DP=2596;DP4=1447,911,14,9;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=9.72365e-10;MQSB=2.79234e-07;RPB=0.568881;SGB=72.7161;VDB=0.116396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.5:12138678 chr05:012138678 0 W/12138678-12138678 FN2324 SNP C -> A AC=1;AN=192;BQB=0.00424699;DP=4020;DP4=1790,1747,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000248756;MQB=2.0142e-08;MQSB=0.937777;RPB=0.997104;SGB=21.4339;VDB=0.213685;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.5:12138773 chr05:012138773 0 W/12138773-12138773 FN4119-S SNP C -> T AC=1;AN=182;BQB=0.995376;DP=2242;DP4=1176,983,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.78447e-07;MQSB=0.703517;RPB=0.963564;SGB=48.6223;VDB=0.788058;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN-93 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g20710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2753-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN2753-S SNP C -> T AC=2;AN=200;BQB=0.541688;DP=4491;DP4=2059,2223,16,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.42865e-13;MQSB=0.930478;RPB=0.893807;SGB=109.527;VDB=0.95037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN2767-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN2767-S SNP C -> T AC=2;AN=198;BQB=0.930924;DP=3876;DP4=1694,1977,25,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000257998;MQB=1.84921e-27;MQSB=0.998842;RPB=0.959863;SGB=52.4176;VDB=0.770579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN3287-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN3287-S SNP C -> T AC=2;AN=184;BQB=0.935573;DP=2792;DP4=1303,1400,20,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.85904e-25;MQSB=0.992598;RPB=0.708984;SGB=188.918;VDB=0.880934;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN3472-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN3472-S SNP C -> T AC=2;AN=184;BQB=0.719006;DP=2713;DP4=1242,1383,24,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.09946e-23;MQSB=0.996489;RPB=0.681426;SGB=177.536;VDB=0.894466;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN3581-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN3581-S SNP C -> T AC=2;AN=190;BQB=0.905711;DP=2677;DP4=1210,1366,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10204e-13;MQSB=0.983105;RPB=0.862508;SGB=117.403;VDB=0.897172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN3858-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN3858-S SNP C -> T AC=2;AN=158;BQB=0.788483;DP=2336;DP4=1083,1175,17,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.38169e-18;MQSB=0.999794;RPB=0.963654;SGB=87.9846;VDB=0.297209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN4099-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN4099-S SNP C -> T AC=2;AN=182;BQB=0.870442;DP=2897;DP4=1289,1533,21,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.11088e-21;MQSB=0.999965;RPB=0.97178;SGB=152.372;VDB=0.0693312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN4147-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN4147-S SNP C -> T AC=2;AN=170;BQB=0.928322;DP=2313;DP4=1059,1191,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.89915e-11;MQSB=0.998466;RPB=0.780073;SGB=70.0854;VDB=0.61789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|1|1) FN729-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN729-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g20710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN789-S.SNP.5:12140692 chr05:012140692 0 W/12140692-12140692 FN789-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g20710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN-216.SNP.5:12145728 chr05:012145728 0 W/12145728-12145728 FN-216 Single Base Substitution T-G INTRON HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-304.SNP.5:12145728 chr05:012145728 0 W/12145728-12145728 FN-304 Single Base Substitution T-G INTRON HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN3447-S.SNP.5:12145728 chr05:012145728 0 W/12145728-12145728 FN3447-S SNP T -> G AC=1;AN=184;BQB=0.952412;DP=2760;DP4=1337,1250,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000362319;MQB=2.30339e-08;MQSB=0.995039;RPB=0.247633;SGB=3.75875;VDB=0.892439;EFF=INTRON(MODIFIER||||974|LOC_Os05g20710|protein_coding|CODING|LOC_Os05g20710.1|7|1) 703-2.SNP.5:12149542 chr05:012149542 0 W/12149542-12149542 703-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1451, Mutant_ID: 703-2, Generation: M2, Mutations: 24, Genes: 23, Seed availability: Yes. FN-215.SNP.5:12150055 chr05:012150055 0 W/12150055-12150055 FN-215 Single Base Substitution A-G INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1325-S.SNP.5:12154310 chr05:012154310 0 W/12154310-12154310 FN1325-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2593-S.SNP.5:12154674 chr05:012154674 0 W/12154674-12154674 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.691195;DP=3032;DP4=1401,1439,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00131926;MQB=0.000178991;MQSB=2.50413e-08;RPB=0.917123;SGB=40.3588;VDB=0.332598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.5:12156864 chr05:012156864 0 W/12156864-12156864 FN1434-S Single Base Substitution C-T INTRON HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2572-S.SNP.5:12162741 chr05:012162741 0 W/12162741-12162741 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.949741;DP=3991;DP4=1978,1769,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.32537e-12;MQSB=0.962181;RPB=0.971499;SGB=39.7248;VDB=0.500829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A413V|581|LOC_Os05g20730|protein_coding|CODING|LOC_Os05g20730.1|3|1) FN4037-S.SNP.5:12167148 chr05:012167148 0 W/12167148-12167148 FN4037-S SNP A -> C AC=1;AN=168;BQB=0.650645;DP=2157;DP4=777,1200,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00724417;MQSB=0.784851;RPB=0.908568;SGB=30.0193;VDB=0.403377;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.5:12169536 chr05:012169536 0 W/12169536-12169536 FN4155-S SNP G -> A AC=2;AN=170;BQB=0.582768;DP=2492;DP4=1202,1207,14,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.26407e-15;MQSB=0.999996;RPB=0.587677;SGB=118.955;VDB=0.921486;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN-341 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1279-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN1279-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1668-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN1668-S SNP C -> A AC=1;AN=188;BQB=0.99895;DP=3469;DP4=1729,1708,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.24094e-09;MQSB=0.998208;RPB=0.868166;SGB=31.1628;VDB=0.608571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L989F|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN2607-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN2607-S SNP C -> A AC=1;AN=198;BQB=0.903466;DP=4253;DP4=2148,1873,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.41052e-10;MQSB=0.998173;RPB=0.731438;SGB=34.5346;VDB=0.79112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L989F|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN3095-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN3095-S SNP C -> A AC=2;AN=184;BQB=0.665972;DP=2875;DP4=1553,1219,18,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.61121e-14;MQSB=0.95704;RPB=0.581272;SGB=95.6183;VDB=0.446377;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L989F|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN3455-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN3455-S SNP C -> A AC=1;AN=184;BQB=0.969513;DP=2671;DP4=1457,1146,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51423e-08;MQSB=0.987367;RPB=0.288052;SGB=35.7479;VDB=0.677511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L989F|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN4130-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN4130-S SNP C -> A AC=2;AN=182;BQB=0.96241;DP=2885;DP4=1541,1250,15,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.9916e-17;MQSB=0.978139;RPB=0.494934;SGB=91.8015;VDB=0.550852;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L989F|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN631-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN631-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN702-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN702-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN809-S.SNP.5:12178208 chr05:012178208 0 W/12178208-12178208 FN809-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3630-S.SNP.5:12178798 chr05:012178798 0 W/12178798-12178798 FN3630-S SNP A -> T AC=1;AN=190;BQB=0.573536;DP=2928;DP4=1488,1351,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.13699e-05;MQSB=0.998644;RPB=0.976752;SGB=53.6492;VDB=0.990378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L793I|1248|LOC_Os05g20750|protein_coding|CODING|LOC_Os05g20750.1|7|1) FN-8.SNP.5:12179705 chr05:012179705 0 W/12179705-12179705 FN-8 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN-273.SNP.5:12183830 chr05:012183830 0 W/12183830-12183830 FN-273 Single Base Substitution T-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3721-S.SNP.5:12212713 chr05:012212713 0 W/12212713-12212713 FN3721-S SNP C -> A AC=2;AN=190;BQB=0.93834;DP=1993;DP4=707,1172,11,10;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.30465e-08;MQSB=0.0107494;RPB=0.755664;SGB=64.5316;VDB=0.27484;EFF=INTRON(MODIFIER||||236|LOC_Os05g20810|protein_coding|CODING|LOC_Os05g20810.1|1|1) FN2473.SNP.5:12214632 chr05:012214632 0 W/12214632-12214632 FN2473 SNP G -> C AC=1;AN=200;BQB=0.646455;DP=7213;DP4=2837,4035,14,19;HOB=5e-05;ICB=0.0001005;MQ=16;MQ0F=0.24539;MQB=0.00507921;MQSB=4.00771e-42;RPB=0.386788;SGB=146.368;VDB=0.795195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.5:12223985 chr05:012223985 0 W/12223985-12223985 FN2558-S SNP T -> C AC=2;AN=198;BQB=0.975683;DP=3991;DP4=1947,1832,19,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.27736e-26;MQSB=0.925392;RPB=0.869759;SGB=191.998;VDB=0.926998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.5:12224683 chr05:012224683 0 W/12224683-12224683 FN3817-S SNP A -> T AC=1;AN=190;BQB=0.99412;DP=2761;DP4=1218,1417,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52968e-10;MQSB=0.997257;RPB=0.735336;SGB=46.7622;VDB=0.959815;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.5:12227012 chr05:012227012 0 W/12227012-12227012 FN701-S Single Base Substitution C-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1517-S.SNP.5:12227293 chr05:012227293 0 W/12227293-12227293 FN1517-S Single Base Substitution A-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN931-S.SNP.5:12230387 chr05:012230387 0 W/12230387-12230387 FN931-S Single Base Substitution C-T INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3804-S.SNP.5:12231457 chr05:012231457 0 W/12231457-12231457 FN3804-S SNP G -> C AC=1;AN=190;BQB=0.997511;DP=2532;DP4=1204,1254,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3644e-11;MQSB=0.964403;RPB=0.983518;SGB=85.5263;VDB=0.836469;EFF=INTRON(MODIFIER||||693|LOC_Os05g20830|protein_coding|CODING|LOC_Os05g20830.1|1|1) FN2485.SNP.5:12232953 chr05:012232953 0 W/12232953-12232953 FN2485 SNP G -> A AC=2;AN=200;BQB=0.995295;DP=4532;DP4=2106,2146,27,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.45734e-29;MQSB=0.917795;RPB=0.884967;SGB=173.661;VDB=0.767182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V346I|693|LOC_Os05g20830|protein_coding|CODING|LOC_Os05g20830.1|4|1) FN1002-S.SNP.5:12241182 chr05:012241182 0 W/12241182-12241182 FN1002-S Single Base Substitution C-G INTRON HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1615-S.SNP.5:12244091 chr05:012244091 0 W/12244091-12244091 FN1615-S Single Base Substitution G-T INTRON Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1615-S.SNP.5:12244092 chr05:012244092 0 W/12244092-12244092 FN1615-S Single Base Substitution G-T INTRON Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN782-S.SNP.5:12246315 chr05:012246315 0 W/12246315-12246315 FN782-S Single Base Substitution C-G INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN-294.SNP.5:12247988 chr05:012247988 0 W/12247988-12247988 FN-294 Single Base Substitution C-T INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN1375-S.SNP.5:12249940 chr05:012249940 0 W/12249940-12249940 FN1375-S Single Base Substitution A-G INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3574-S.SNP.5:12250037 chr05:012250037 0 W/12250037-12250037 FN3574-S SNP T -> G AC=1;AN=188;BQB=0.742626;DP=2501;DP4=1245,1161,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00439824;MQB=0.083145;MQSB=0.47617;RPB=0.301005;SGB=44.4357;VDB=0.0693858;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.5:12255342 chr05:012255342 0 W/12255342-12255342 FN-196 Single Base Substitution G-A INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1304-S.SNP.5:12267199 chr05:012267199 0 W/12267199-12267199 FN1304-S Single Base Substitution A-G INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN-211.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN-211 Single Base Substitution C-A INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-334.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN-334 Single Base Substitution C-A INTERGENIC HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-348.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN-348 Single Base Substitution C-A INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-44.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN-44 Single Base Substitution C-A INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN1301-S.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN1301-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1488-S.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN1488-S Single Base Substitution C-A INTERGENIC Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1585-S.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN1585-S Single Base Substitution C-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2310.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN2310 SNP C -> A AC=2;AN=192;BQB=0.993111;DP=4317;DP4=1846,2175,25,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.77909e-26;MQSB=0.666218;RPB=0.162519;SGB=116.102;VDB=0.709253;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN4151-S SNP C -> A AC=2;AN=170;BQB=0.90979;DP=2467;DP4=1140,1220,18,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.69087e-17;MQSB=0.994592;RPB=0.980832;SGB=66.2943;VDB=0.897752;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.5:12270422 chr05:012270422 0 W/12270422-12270422 FN989-S Single Base Substitution C-A INTERGENIC HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3285-S.SNP.5:12275813 chr05:012275813 0 W/12275813-12275813 FN3285-S SNP C -> T AC=2;AN=184;BQB=0.748673;DP=4302;DP4=2244,1913,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.31895e-16;MQSB=0.977507;RPB=0.282153;SGB=73.7109;VDB=0.649536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A64T|229|LOC_Os05g20900|protein_coding|CODING|LOC_Os05g20900.1|2|1) FN-294.SNP.5:12278089 chr05:012278089 0 W/12278089-12278089 FN-294 Single Base Substitution T-G INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN-141.SNP.5:12281711 chr05:012281711 0 W/12281711-12281711 FN-141 Single Base Substitution C-A INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN2452.SNP.5:12281844 chr05:012281844 0 W/12281844-12281844 FN2452 SNP G -> A AC=1;AN=200;BQB=0.994549;DP=4372;DP4=1976,2165,9,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00137237;MQB=0.0367103;MQSB=0.20229;RPB=0.499782;SGB=77.2904;VDB=0.630381;EFF=INTERGENIC(MODIFIER||||||||||1) FN-5.SNP.5:12284337 chr05:012284337 0 W/12284337-12284337 FN-5 Single Base Substitution C-G INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN680-S.SNP.5:12284380 chr05:012284380 0 W/12284380-12284380 FN680-S Single Base Substitution C-T INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2484.SNP.5:12284569 chr05:012284569 0 W/12284569-12284569 FN2484 SNP C -> G AC=1;AN=200;BQB=0.776032;DP=2097;DP4=561,1391,1,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=6.29391e-06;MQSB=9.32606e-36;RPB=0.891644;SGB=63.4749;VDB=0.276813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.5:12292745 chr05:012292745 0 W/12292745-12292745 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.645302;DP=4627;DP4=2179,2145,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18903e-07;MQSB=0.604205;RPB=0.366521;SGB=5.66499;VDB=0.168442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.5:12295825 chr05:012295825 0 W/12295825-12295825 FN1470-S Single Base Substitution C-T START_GAINED HET LOC_Os05g20914 expressed protein SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2702-S.SNP.5:12299904 chr05:012299904 0 W/12299904-12299904 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.959262;DP=4806;DP4=2389,2181,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.89882e-13;MQSB=0.661901;RPB=0.344839;SGB=12.7003;VDB=0.0652571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.5:12300944 chr05:012300944 0 W/12300944-12300944 FN1640-S Single Base Substitution G-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN778-S.SNP.5:12302216 chr05:012302216 0 W/12302216-12302216 FN778-S Single Base Substitution G-A INTRON HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1140-S.SNP.5:12307001 chr05:012307001 0 W/12307001-12307001 FN1140-S Single Base Substitution G-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3364-S.SNP.5:12320098 chr05:012320098 0 W/12320098-12320098 FN3364-S SNP A -> G AC=1;AN=184;BQB=0.958709;DP=2750;DP4=1297,1338,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61063e-06;MQSB=0.984746;RPB=0.952931;SGB=39.699;VDB=0.376037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K151R|546|LOC_Os05g20950|protein_coding|CODING|LOC_Os05g20950.1|1|1) FN1442-S.SNP.5:12320560 chr05:012320560 0 W/12320560-12320560 FN1442-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g20950 retrotransposon protein, putative, unclassified, expressed SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1346-S.SNP.5:12322506 chr05:012322506 0 W/12322506-12322506 FN1346-S Single Base Substitution G-A INTRON HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1606-S.SNP.5:12323574 chr05:012323574 0 W/12323574-12323574 FN1606-S Single Base Substitution A-G INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3310-S.SNP.5:12331860 chr05:012331860 0 W/12331860-12331860 FN3310-S SNP T -> C AC=1;AN=184;BQB=0.242023;DP=2951;DP4=1283,1509,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.96125e-08;MQSB=0.892961;RPB=0.449203;SGB=2.23696;VDB=0.921594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.5:12332959 chr05:012332959 0 W/12332959-12332959 FN2381 SNP T -> C AC=1;AN=192;BQB=0.915535;DP=4574;DP4=1953,2278,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.05597e-07;MQSB=0.0990342;RPB=0.851294;SGB=26.127;VDB=0.915039;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D218|339|LOC_Os05g20960|protein_coding|CODING|LOC_Os05g20960.1|2|1) FN-310.SNP.5:12335641 chr05:012335641 0 W/12335641-12335641 FN-310 Single Base Substitution C-T INTRON HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-310.SNP.5:12335642 chr05:012335642 0 W/12335642-12335642 FN-310 Single Base Substitution C-T INTRON HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN3888-S.SNP.5:12343291 chr05:012343291 0 W/12343291-12343291 FN3888-S SNP C -> G AC=1;AN=158;BQB=0.776163;DP=2321;DP4=1101,1149,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000861698;MQB=1.65267e-07;MQSB=0.08133;RPB=0.952643;SGB=73.2838;VDB=0.918625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T36R|363|LOC_Os05g20980|protein_coding|CODING|LOC_Os05g20980.1|1|1) FN1285-S.SNP.5:12345068 chr05:012345068 0 W/12345068-12345068 FN1285-S Single Base Substitution T-C INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2138-S.SNP.5:12345068 chr05:012345068 0 W/12345068-12345068 FN2138-S SNP T -> C AC=2;AN=168;BQB=0.0467512;DP=4184;DP4=1985,2115,34,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.36481e-26;MQSB=0.974904;RPB=0.441301;SGB=4.01424;VDB=0.967042;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.5:12345068 chr05:012345068 0 W/12345068-12345068 FN630-S Single Base Substitution T-C INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2530-S.SNP.5:12346882 chr05:012346882 0 W/12346882-12346882 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.97146;DP=3928;DP4=1880,1784,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.08712e-11;MQSB=0.723505;RPB=0.886337;SGB=34.5346;VDB=0.0272157;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.5:12354249 chr05:012354249 0 W/12354249-12354249 FN-168 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os05g20990 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2445.SNP.5:12354281 chr05:012354281 0 W/12354281-12354281 FN2445 SNP G -> A AC=1;AN=200;BQB=0.821489;DP=4696;DP4=2213,2226,7,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00212947;MQB=0.0205804;MQSB=0.406686;RPB=0.998249;SGB=36.6644;VDB=0.407549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E816K|882|LOC_Os05g20990|protein_coding|CODING|LOC_Os05g20990.1|11|1) FN2251-S.SNP.5:12356827 chr05:012356827 0 W/12356827-12356827 FN2251-S SNP G -> C AC=2;AN=190;BQB=0.999763;DP=4925;DP4=2258,2424,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000203046;MQB=3.14259e-12;MQSB=0.931925;RPB=0.98508;SGB=108.296;VDB=0.944912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Gta|L397V|580|LOC_Os05g21000|protein_coding|CODING|LOC_Os05g21000.1|6|1) FN702-S.SNP.5:12357998 chr05:012357998 0 W/12357998-12357998 FN702-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g21000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1084-S.SNP.5:12358349 chr05:012358349 0 W/12358349-12358349 FN1084-S Single Base Substitution C-T INTRON HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2558-S.SNP.5:12361104 chr05:012361104 0 W/12361104-12361104 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.000519557;DP=2947;DP4=1669,887,14,9;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00135731;MQB=9.61671e-05;MQSB=2.20193e-15;RPB=0.971693;SGB=-10.2651;VDB=0.0468995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.5:12374000 chr05:012374000 0 W/12374000-12374000 FN2106-S SNP C -> T AC=1;AN=168;BQB=0.308432;DP=3021;DP4=1519,1458,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.00662032;MQB=0.999558;MQSB=1.46743e-36;RPB=0.346589;SGB=4.1907;VDB=0.333474;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1368|1532|LOC_Os05g21040|protein_coding|CODING|LOC_Os05g21040.1|8|1) FN260-S.SNP.5:12380270 chr05:012380270 0 W/12380270-12380270 FN260-S Single Base Substitution T-G INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3534-S.SNP.5:12381919 chr05:012381919 0 W/12381919-12381919 FN3534-S SNP C -> T AC=1;AN=188;BQB=0.883563;DP=3351;DP4=1860,1349,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.06187e-09;MQSB=0.00133684;RPB=0.999992;SGB=78.5038;VDB=0.0689168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.5:12383104 chr05:012383104 0 W/12383104-12383104 FN2185-S SNP A -> T AC=1;AN=190;BQB=0.693756;DP=3809;DP4=1585,1884,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.01563e-06;MQSB=3.60748e-15;RPB=0.999964;SGB=57.4238;VDB=0.516335;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.5:12385634 chr05:012385634 0 W/12385634-12385634 FN1179-S Single Base Substitution C-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3343-S.SNP.5:12387018 chr05:012387018 0 W/12387018-12387018 FN3343-S SNP T -> A AC=2;AN=184;BQB=0.759445;DP=3124;DP4=1447,1492,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.72617e-16;MQSB=0.967004;RPB=0.98516;SGB=81.5311;VDB=0.294029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.5:12387190 chr05:012387190 0 W/12387190-12387190 FN3777-S SNP C -> T AC=1;AN=190;BQB=0.973265;DP=3009;DP4=1626,1287,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52739e-12;MQSB=0.992936;RPB=0.601836;SGB=90.0802;VDB=0.698752;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.5:12390261 chr05:012390261 0 W/12390261-12390261 FN_822-5-1 Single Base Substitution C-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1740-S.SNP.5:12395808 chr05:012395808 0 W/12395808-12395808 FN1740-S SNP G -> T AC=2;AN=188;BQB=0.0624865;DP=2425;DP4=1554,828,22,6;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00247423;MQB=2.84003e-05;MQSB=2.41772e-05;RPB=0.198402;SGB=-138.632;VDB=0.485979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.5:12402784 chr05:012402784 0 W/12402784-12402784 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.0956632;DP=3412;DP4=1167,2171,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54884e-07;MQSB=0.968646;RPB=0.86583;SGB=70.9657;VDB=0.741163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.5:12403390 chr05:012403390 0 W/12403390-12403390 FN2487 SNP T -> G AC=1;AN=200;BQB=0.585145;DP=3691;DP4=1144,2395,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.02248e-11;MQSB=0.100013;RPB=0.742005;SGB=86.5007;VDB=0.260787;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.5:12405915 chr05:012405915 0 W/12405915-12405915 FN428-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g21100 retrotransposon protein, putative, unclassified, expressed SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1106-S.SNP.5:12411151 chr05:012411151 0 W/12411151-12411151 FN1106-S Single Base Substitution G-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2151-S.SNP.5:12412226 chr05:012412226 0 W/12412226-12412226 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.215619;DP=1823;DP4=869,904,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0877674;MQB=0.750965;MQSB=0.00976033;RPB=0.558411;SGB=2.75988;VDB=0.185215;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L584|867|LOC_Os05g21110|protein_coding|CODING|LOC_Os05g21110.1|3|1) FN2646-S.SNP.5:12413189 chr05:012413189 0 W/12413189-12413189 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.259463;DP=4547;DP4=1912,2014,7,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000219925;MQB=7.33495e-06;MQSB=0.0172538;RPB=0.999937;SGB=54.6902;VDB=0.192221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R306L|867|LOC_Os05g21110|protein_coding|CODING|LOC_Os05g21110.1|2|1) FN4150-S.SNP.5:12413389 chr05:012413389 0 W/12413389-12413389 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.99988;DP=2019;DP4=955,1018,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00346706;MQB=0.000264477;MQSB=0.98237;RPB=0.932062;SGB=38.987;VDB=0.620674;EFF=INTRON(MODIFIER||||867|LOC_Os05g21110|protein_coding|CODING|LOC_Os05g21110.1|1|1) 702-2-1.SNP.5:12414853 chr05:012414853 0 W/12414853-12414853 702-2-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1444, Mutant_ID: 702-2-1, Generation: M2, Mutations: 28, Genes: 16, Seed availability: No. FN3610-S.SNP.5:12423884 chr05:012423884 0 W/12423884-12423884 FN3610-S SNP T -> A AC=2;AN=190;BQB=0.960121;DP=2807;DP4=1545,1102,21,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41627e-16;MQSB=0.992076;RPB=0.905954;SGB=131.065;VDB=0.622219;EFF=INTRON(MODIFIER||||1980|LOC_Os05g21120|protein_coding|CODING|LOC_Os05g21120.1|8|1) FN_543-2-6.SNP.5:12423946 chr05:012423946 0 W/12423946-12423946 FN_543-2-6 Single Base Substitution C-A HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3452-S.SNP.5:12429617 chr05:012429617 0 W/12429617-12429617 FN3452-S SNP C -> T AC=2;AN=184;BQB=0.904181;DP=2327;DP4=1139,1090,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.38891e-12;MQSB=0.990217;RPB=0.465159;SGB=70.9657;VDB=0.643741;EFF=INTRON(MODIFIER||||1980|LOC_Os05g21120|protein_coding|CODING|LOC_Os05g21120.1|13|1) FN960-S.SNP.5:12431699 chr05:012431699 0 W/12431699-12431699 FN960-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN-272.SNP.5:12453474 chr05:012453474 0 W/12453474-12453474 FN-272 Single Base Substitution G-T UTR_5_PRIME HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN-272.SNP.5:12453475 chr05:012453475 0 W/12453475-12453475 FN-272 Single Base Substitution C-T UTR_5_PRIME HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3593-S.SNP.5:12463801 chr05:012463801 0 W/12463801-12463801 FN3593-S SNP C -> T AC=1;AN=190;BQB=0.998777;DP=3082;DP4=1724,1233,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.38045e-10;MQSB=0.782686;RPB=0.083057;SGB=62.7569;VDB=0.259502;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q29*|715|LOC_Os05g21190|protein_coding|CODING|LOC_Os05g21190.1|1|1);LOF=(LOC_Os05g21190|LOC_Os05g21190|1|1.00);NMD=(LOC_Os05g21190|LOC_Os05g21190|1|1.00) FN239-S.SNP.5:12498179 chr05:012498179 0 W/12498179-12498179 FN239-S Single Base Substitution T-A INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2350.SNP.5:12498633 chr05:012498633 0 W/12498633-12498633 FN2350 SNP C -> T AC=1;AN=192;BQB=0.904686;DP=3727;DP4=1414,1817,12,23;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0719077;MQB=0.509736;MQSB=3.40647e-08;RPB=0.319624;SGB=-43.6052;VDB=0.806405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.5:12508210 chr05:012508210 0 W/12508210-12508210 FN1679-S SNP C -> A AC=1;AN=188;BQB=0.00105037;DP=3493;DP4=1858,1574,13,20;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.0183224;MQB=0.996156;MQSB=0;RPB=0.886422;SGB=-80.8397;VDB=0.33295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.5:12510726 chr05:012510726 0 W/12510726-12510726 FN1104-S Single Base Substitution G-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2388.SNP.5:12510726 chr05:012510726 0 W/12510726-12510726 FN2388 SNP G -> A AC=1;AN=200;BQB=0.796011;DP=3991;DP4=1680,1857,17,11;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.181158;MQB=0.612452;MQSB=1.49689e-22;RPB=0.157607;SGB=123.342;VDB=0.111796;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.5:12513082 chr05:012513082 0 W/12513082-12513082 FN491-S Single Base Substitution G-T INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN3404-S.SNP.5:12557782 chr05:012557782 0 W/12557782-12557782 FN3404-S SNP G -> T AC=2;AN=184;BQB=0.985551;DP=2463;DP4=1185,1221,3,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.99203e-06;MQSB=0.969178;RPB=0.0471349;SGB=28.7043;VDB=0.550602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A152E|563|LOC_Os05g21230|protein_coding|CODING|LOC_Os05g21230.1|1|1) FN3404-S.SNP.5:12557942 chr05:012557942 0 W/12557942-12557942 FN3404-S SNP C -> T AC=2;AN=184;BQB=0.922635;DP=2619;DP4=1237,1318,1,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.70019e-05;MQSB=0.978551;RPB=0.76173;SGB=39.699;VDB=0.340495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D99N|563|LOC_Os05g21230|protein_coding|CODING|LOC_Os05g21230.1|1|1) FN2784-S.SNP.5:12559577 chr05:012559577 0 W/12559577-12559577 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.683271;DP=3993;DP4=1873,1917,14,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.53344e-20;MQSB=0.9997;RPB=0.990079;SGB=150.641;VDB=0.0438398;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.5:12569266 chr05:012569266 0 W/12569266-12569266 FN-94 Single Base Substitution A-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2563-S.SNP.5:12574477 chr05:012574477 0 W/12574477-12574477 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.912239;DP=4099;DP4=2047,1886,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.12213e-06;MQSB=0.980061;RPB=0.210047;SGB=40.3588;VDB=0.57381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.5:12575864 chr05:012575864 0 W/12575864-12575864 FN2476 SNP C -> T AC=1;AN=200;BQB=0.998466;DP=4738;DP4=2283,2003,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021106;MQB=4.94402e-11;MQSB=0.895133;RPB=0.886214;SGB=58.2954;VDB=0.153313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.5:12577402 chr05:012577402 0 W/12577402-12577402 FN3287-S SNP A -> G AC=1;AN=184;BQB=0.979729;DP=1414;DP4=1294,39,19,0;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.68114e-09;MQSB=0.966265;RPB=0.30924;SGB=56.8786;VDB=0.331391;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.5:12583202 chr05:012583202 0 W/12583202-12583202 FN4073-S SNP C -> A AC=1;AN=182;BQB=0.985977;DP=3544;DP4=2261,1219,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=24;MQ0F=0.232223;MQB=0.871255;MQSB=8.58548e-09;RPB=0.949947;SGB=67.2255;VDB=0.142407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.5:12594057 chr05:012594057 0 W/12594057-12594057 FN1292-S Single Base Substitution A-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1496-S.SNP.5:12597599 chr05:012597599 0 W/12597599-12597599 FN1496-S Single Base Substitution G-A INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1657-S.SNP.5:12600206 chr05:012600206 0 W/12600206-12600206 FN1657-S Single Base Substitution C-A INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN498-S.SNP.5:12600892 chr05:012600892 0 W/12600892-12600892 FN498-S Single Base Substitution C-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN_N1-150-1.SNP.5:12611566 chr05:012611566 0 W/12611566-12611566 FN_N1-150-1 Single Base Substitution T-C Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1722-S.SNP.5:12611974 chr05:012611974 0 W/12611974-12611974 FN1722-S SNP A -> T AC=1;AN=188;BQB=0.105379;DP=4078;DP4=1911,2116,14,19;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000245218;MQB=8.24622e-12;MQSB=0.045764;RPB=0.963979;SGB=-5.76375;VDB=0.18001;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.5:12616715 chr05:012616715 0 W/12616715-12616715 FN3716-S SNP G -> A AC=1;AN=190;BQB=0.985307;DP=1799;DP4=698,958,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000205478;MQSB=1.4278e-14;RPB=0.756352;SGB=21.8853;VDB=0.143164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.5:12624100 chr05:012624100 0 W/12624100-12624100 FN3398-S SNP A -> C AC=1;AN=184;BQB=0.99736;DP=2954;DP4=1614,1231,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.44718e-10;MQSB=0.931912;RPB=0.997895;SGB=28.3187;VDB=0.348183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.5:12624107 chr05:012624107 0 W/12624107-12624107 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.999842;DP=2892;DP4=1584,1212,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10074e-10;MQSB=0.96685;RPB=0.992075;SGB=46.3132;VDB=0.350103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.5:12626457 chr05:012626457 0 W/12626457-12626457 FN2438 SNP A -> G AC=1;AN=200;BQB=0.702794;DP=4298;DP4=1932,1933,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232666;MQB=2.1191e-10;MQSB=0.746883;RPB=0.956315;SGB=19.1209;VDB=0.753461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V527A|822|LOC_Os05g22314|protein_coding|CODING|LOC_Os05g22314.1|7|1) FN2538-S.SNP.5:12626927 chr05:012626927 0 W/12626927-12626927 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.754862;DP=3742;DP4=1590,1910,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.24624e-06;MQSB=1.05928e-15;RPB=0.819806;SGB=9.3494;VDB=0.472891;EFF=INTRON(MODIFIER||||822|LOC_Os05g22314|protein_coding|CODING|LOC_Os05g22314.1|6|1) FN-20.SNP.5:12627675 chr05:012627675 0 W/12627675-12627675 FN-20 Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN1018-S.SNP.5:12638106 chr05:012638106 0 W/12638106-12638106 FN1018-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN580-S.SNP.5:12642884 chr05:012642884 0 W/12642884-12642884 FN580-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3864-S.SNP.5:12651704 chr05:012651704 0 W/12651704-12651704 FN3864-S SNP T -> G AC=1;AN=158;BQB=0.994854;DP=2323;DP4=1146,1075,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.92843e-08;MQSB=0.98727;RPB=0.59344;SGB=55.806;VDB=0.108008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.5:12653360 chr05:012653360 0 W/12653360-12653360 FN3927-S SNP T -> G AC=2;AN=158;BQB=0.992214;DP=2464;DP4=1131,1215,26,27;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000811688;MQB=5.72336e-28;MQSB=0.821242;RPB=0.998562;SGB=190.009;VDB=0.956979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.5:12665933 chr05:012665933 0 W/12665933-12665933 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.970355;DP=2784;DP4=1451,1236,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0706e-09;MQSB=0.980348;RPB=0.765244;SGB=58.2031;VDB=0.788754;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.5:12669415 chr05:012669415 0 W/12669415-12669415 FN731-S Single Base Substitution G-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. W313-1-1-1-1.SNP.5:12669415 chr05:012669415 0 W/12669415-12669415 W313-1-1-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN1455-S.SNP.5:12672967 chr05:012672967 0 W/12672967-12672967 FN1455-S Single Base Substitution C-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN_N1-116-1.SNP.5:12675066 chr05:012675066 0 W/12675066-12675066 FN_N1-116-1 Single Base Substitution T-C Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1505-S.SNP.5:12694198 chr05:012694198 0 W/12694198-12694198 FN1505-S Single Base Substitution C-T INTERGENIC Homo SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN-409.SNP.5:12696242 chr05:012696242 0 W/12696242-12696242 FN-409 Single Base Substitution G-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-409.SNP.5:12696243 chr05:012696243 0 W/12696243-12696243 FN-409 Single Base Substitution C-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1040-S.SNP.5:12698715 chr05:012698715 0 W/12698715-12698715 FN1040-S Single Base Substitution A-C INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3518-S.SNP.5:12698830 chr05:012698830 0 W/12698830-12698830 FN3518-S SNP C -> T AC=1;AN=188;BQB=0.645036;DP=4198;DP4=2595,1501,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.427108;MQB=0.0136165;MQSB=0;RPB=0.594597;SGB=41.3359;VDB=0.842158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1570Q|1578|LOC_Os05g22390|protein_coding|CODING|LOC_Os05g22390.1|14|1) FN4021-S.SNP.5:12704311 chr05:012704311 0 W/12704311-12704311 FN4021-S SNP C -> T AC=1;AN=168;BQB=0.948582;DP=2708;DP4=1344,1270,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.56882e-09;MQSB=0.999632;RPB=0.139438;SGB=61.0344;VDB=0.505717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M757I|1578|LOC_Os05g22390|protein_coding|CODING|LOC_Os05g22390.1|8|1) FN2297.SNP.5:12726853 chr05:012726853 0 W/12726853-12726853 FN2297 SNP C -> T AC=2;AN=192;BQB=0.376359;DP=4593;DP4=2251,2072,18,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000653168;MQB=4.28579e-17;MQSB=0.615393;RPB=0.592025;SGB=118.196;VDB=0.733625;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C270|340|LOC_Os05g22420|protein_coding|CODING|LOC_Os05g22420.1|1|1) FN3927-S.SNP.5:12740269 chr05:012740269 0 W/12740269-12740269 FN3927-S SNP C -> T AC=2;AN=158;BQB=0.367092;DP=2803;DP4=1440,1230,18,20;HOB=0.024996;ICB=0.493752;MQ=27;MQ0F=0.101677;MQB=0.877424;MQSB=0.0368637;RPB=0.0131985;SGB=160.673;VDB=0.412416;EFF=INTRON(MODIFIER||||503|LOC_Os05g22440|protein_coding|CODING|LOC_Os05g22440.1|3|1) FN3429-S.SNP.5:12743168 chr05:012743168 0 W/12743168-12743168 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.900741;DP=2843;DP4=1248,1488,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.113612;MQB=0.96986;MQSB=0;RPB=0.82212;SGB=-0.806606;VDB=0.873542;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.5:12744359 chr05:012744359 0 W/12744359-12744359 FN4070-S SNP A -> G AC=2;AN=182;BQB=0.946172;DP=3237;DP4=1438,1637,24,16;HOB=0.0217365;ICB=0.494567;MQ=13;MQ0F=0.481928;MQB=0.323636;MQSB=0;RPB=0.454428;SGB=130.421;VDB=0.776299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.5:12746595 chr05:012746595 0 W/12746595-12746595 FN3875-S SNP G -> T AC=2;AN=158;BQB=0.952383;DP=2373;DP4=1080,1192,15,13;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.0139064;MQB=5.05185e-09;MQSB=0.956022;RPB=0.365026;SGB=116.978;VDB=0.309719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.5:12747680 chr05:012747680 0 W/12747680-12747680 FN1480-S Single Base Substitution T-G INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2291.SNP.5:12750995 chr05:012750995 0 W/12750995-12750995 FN2291 SNP A -> C AC=1;AN=192;BQB=0.631602;DP=4808;DP4=2163,2316,22,15;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0840266;MQB=0.644085;MQSB=0.962165;RPB=0.796699;SGB=80.2009;VDB=0.437578;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctC|L127|1087|LOC_Os05g22460|protein_coding|CODING|LOC_Os05g22460.1|4|1) FN4161-S.SNP.5:12753579 chr05:012753579 0 W/12753579-12753579 FN4161-S SNP A -> G AC=2;AN=170;BQB=0.922882;DP=2834;DP4=1365,1297,12,24;HOB=0.0232526;ICB=0.494188;MQ=24;MQ0F=0.201482;MQB=0.999864;MQSB=4.35048e-15;RPB=0.249688;SGB=114.059;VDB=0.742031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K917E|1087|LOC_Os05g22460|protein_coding|CODING|LOC_Os05g22460.1|7|1) FN1475-S.SNP.5:12755888 chr05:012755888 0 W/12755888-12755888 FN1475-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1708-S.SNP.5:12763083 chr05:012763083 0 W/12763083-12763083 FN1708-S SNP G -> A AC=1;AN=188;BQB=0.27147;DP=3933;DP4=1592,2314,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000254259;MQB=3.10877e-06;MQSB=0.858088;RPB=0.0981968;SGB=0.908326;VDB=0.326671;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q611*|681|LOC_Os05g22480|protein_coding|CODING|LOC_Os05g22480.1|3|1);LOF=(LOC_Os05g22480|LOC_Os05g22480|1|1.00);NMD=(LOC_Os05g22480|LOC_Os05g22480|1|1.00) FN2419.SNP.5:12778209 chr05:012778209 0 W/12778209-12778209 FN2419 SNP T -> C AC=2;AN=200;BQB=0.00926565;DP=4694;DP4=2126,2178,29,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.81831e-36;MQSB=0.840734;RPB=0.93606;SGB=220.528;VDB=0.300047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y346C|614|LOC_Os05g22500|protein_coding|CODING|LOC_Os05g22500.1|3|1) FN-215.SNP.5:12778410 chr05:012778410 0 W/12778410-12778410 FN-215 Single Base Substitution G-A INTRON HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3906-S.SNP.5:12779115 chr05:012779115 0 W/12779115-12779115 FN3906-S SNP G -> A AC=2;AN=158;BQB=0.737094;DP=2516;DP4=1150,1249,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.42533e-11;MQSB=0.247145;RPB=0.867619;SGB=73.2838;VDB=0.6564;EFF=INTRON(MODIFIER||||614|LOC_Os05g22500|protein_coding|CODING|LOC_Os05g22500.1|1|1) FN3288-S.SNP.5:12781411 chr05:012781411 0 W/12781411-12781411 FN3288-S SNP A -> G AC=1;AN=184;BQB=0.813797;DP=2993;DP4=1446,1466,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57602e-05;MQSB=0.964528;RPB=0.292603;SGB=32.2261;VDB=0.674631;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.5:12785607 chr05:012785607 0 W/12785607-12785607 FN-128 Single Base Substitution C-G INTERGENIC HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN3553-S.SNP.5:12794485 chr05:012794485 0 W/12794485-12794485 FN3553-S SNP C -> A AC=1;AN=188;BQB=0.971691;DP=3175;DP4=1488,1632,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19651e-08;MQSB=0.976667;RPB=0.083572;SGB=53.5223;VDB=0.153791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A384E|503|LOC_Os05g22530|protein_coding|CODING|LOC_Os05g22530.1|4|1) FN-15.SNP.5:12797453 chr05:012797453 0 W/12797453-12797453 FN-15 Single Base Substitution C-T INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN3578-S.SNP.5:12797453 chr05:012797453 0 W/12797453-12797453 FN3578-S SNP C -> T AC=2;AN=188;BQB=0.322762;DP=2695;DP4=1353,1260,23,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05124e-16;MQSB=0.725768;RPB=0.074591;SGB=139.845;VDB=0.435615;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.5:12797453 chr05:012797453 0 W/12797453-12797453 FN500-S Single Base Substitution C-T INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN996-S.SNP.5:12797453 chr05:012797453 0 W/12797453-12797453 FN996-S Single Base Substitution C-T INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3430-S.SNP.5:12798154 chr05:012798154 0 W/12798154-12798154 FN3430-S SNP T -> G AC=1;AN=184;BQB=0.798397;DP=3187;DP4=1735,1337,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.40855e-09;MQSB=0.866967;RPB=0.90731;SGB=0.715177;VDB=0.742215;EFF=INTERGENIC(MODIFIER||||||||||1) 701-1.SNP.5:12801393 chr05:012801393 0 W/12801393-12801393 701-1 Single Base Substitution C-T INTRON Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN2658-S.SNP.5:12802298 chr05:012802298 0 W/12802298-12802298 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.990878;DP=4384;DP4=2079,2008,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000228102;MQB=5.61399e-11;MQSB=0.904357;RPB=0.255524;SGB=51.0851;VDB=0.230463;EFF=INTRON(MODIFIER||||349|LOC_Os05g22540|protein_coding|CODING|LOC_Os05g22540.1|1|1) FN3526-S.SNP.5:12804601 chr05:012804601 0 W/12804601-12804601 FN3526-S SNP T -> C AC=2;AN=188;BQB=0.864198;DP=2661;DP4=1481,1074,11,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.2178e-11;MQSB=0.942099;RPB=0.587167;SGB=41.3359;VDB=0.335124;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN-8 Single Base Substitution G-A INTERGENIC Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1202-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN1202-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1317-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN1317-S Single Base Substitution G-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1461-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1561-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2126-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN2126-S SNP G -> A AC=2;AN=168;BQB=0.697858;DP=1984;DP4=924,1002,13,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.85391e-12;MQSB=0.668091;RPB=0.872345;SGB=-11.926;VDB=0.425368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN2272-S SNP G -> A AC=2;AN=190;BQB=0.778666;DP=4232;DP4=1965,2000,23,39;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.49993e-31;MQSB=0.91713;RPB=0.477051;SGB=210.241;VDB=0.207433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN3387-S SNP G -> A AC=2;AN=184;BQB=0.862123;DP=3250;DP4=1582,1560,17,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.67543e-15;MQSB=0.9791;RPB=0.796062;SGB=139.178;VDB=0.472627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN3705-S SNP G -> A AC=2;AN=190;BQB=0.783235;DP=2671;DP4=1272,1255,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.76153e-15;MQSB=0.998038;RPB=0.881815;SGB=112.85;VDB=0.830102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN3785-S SNP G -> A AC=2;AN=190;BQB=0.943578;DP=3003;DP4=1449,1436,17,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.9981e-16;MQSB=0.999022;RPB=0.859268;SGB=117.403;VDB=0.837994;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN910-S Single Base Substitution G-A INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 FN957-S Single Base Substitution G-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. W500-4-7-1.SNP.5:12804950 chr05:012804950 0 W/12804950-12804950 W500-4-7-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN1701-S.SNP.5:12806642 chr05:012806642 0 W/12806642-12806642 FN1701-S SNP G -> T AC=2;AN=188;BQB=0.127021;DP=1614;DP4=987,581,10,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.000666748;MQSB=0.979922;RPB=0.298588;SGB=15.903;VDB=0.579296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A70E|356|LOC_Os05g22550|protein_coding|CODING|LOC_Os05g22550.1|1|1) FN1759-S.SNP.5:12814839 chr05:012814839 0 W/12814839-12814839 FN1759-S SNP G -> C AC=2;AN=188;BQB=0.999831;DP=3002;DP4=1061,1906,5,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.75522e-10;MQSB=0.842858;RPB=0.862409;SGB=-12.2833;VDB=0.518631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L586F|750|LOC_Os05g22560|protein_coding|CODING|LOC_Os05g22560.1|4|1) FN2286.SNP.5:12815508 chr05:012815508 0 W/12815508-12815508 FN2286 SNP G -> A AC=1;AN=192;BQB=0.866088;DP=4323;DP4=1787,2058,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.79932e-08;MQSB=0.375794;RPB=0.211483;SGB=67.4678;VDB=0.39115;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.5:12818200 chr05:012818200 0 W/12818200-12818200 FN-225 Single Base Substitution C-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN2330.SNP.5:12820122 chr05:012820122 0 W/12820122-12820122 FN2330 SNP T -> G AC=1;AN=192;BQB=0.994282;DP=4832;DP4=2306,2181,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.52354e-09;MQSB=0.610199;RPB=0.726033;SGB=-36.6348;VDB=0.110041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.5:12827777 chr05:012827777 0 W/12827777-12827777 FN1540-S Single Base Substitution A-T INTRON Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3800-S.SNP.5:12830223 chr05:012830223 0 W/12830223-12830223 FN3800-S SNP T -> C AC=2;AN=190;BQB=0.802372;DP=2745;DP4=1370,1162,18,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13472e-20;MQSB=0.998564;RPB=0.754734;SGB=107.178;VDB=0.0800718;EFF=INTRON(MODIFIER||||373|LOC_Os05g22600|protein_coding|CODING|LOC_Os05g22600.1|8|1) FN3653-S.SNP.5:12832354 chr05:012832354 0 W/12832354-12832354 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.66286;DP=2873;DP4=1609,1179,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.65813e-06;MQSB=0.997853;RPB=0.896011;SGB=8.33661;VDB=0.078067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.5:12845590 chr05:012845590 0 W/12845590-12845590 FN2612-S SNP C -> A AC=1;AN=198;BQB=0.962601;DP=3905;DP4=1690,1961,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32117e-08;MQSB=0.997525;RPB=0.905528;SGB=63.3342;VDB=0.0440643;EFF=INTRON(MODIFIER||||154|LOC_Os05g22630|protein_coding|CODING|LOC_Os05g22630.1|1|1) FN2701-S.SNP.5:12846684 chr05:012846684 0 W/12846684-12846684 FN2701-S SNP C -> G AC=1;AN=200;BQB=0.988504;DP=4361;DP4=2099,2004,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00122299;MQSB=0.99588;RPB=0.928813;SGB=26.6347;VDB=0.15244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.5:12848238 chr05:012848238 0 W/12848238-12848238 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.906062;DP=3938;DP4=1901,1827,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.15883e-07;MQSB=0.0218058;RPB=0.821821;SGB=42.3199;VDB=0.248359;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S32|242|LOC_Os05g22640|protein_coding|CODING|LOC_Os05g22640.1|1|1) FN431-S.SNP.5:12853468 chr05:012853468 0 W/12853468-12853468 FN431-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g22650 retrotransposon protein, putative, unclassified, expressed SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN4249-S.SNP.5:12858014 chr05:012858014 0 W/12858014-12858014 FN4249-S SNP G -> T AC=1;AN=170;BQB=0.678987;DP=2799;DP4=1081,1632,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.76474e-10;MQSB=0.995412;RPB=0.78708;SGB=55.5339;VDB=0.35501;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.5:12860591 chr05:012860591 0 W/12860591-12860591 FN4103-S SNP G -> T AC=1;AN=182;BQB=0.414859;DP=3555;DP4=1777,1643,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.57097e-05;MQSB=0.980435;RPB=0.803319;SGB=62.1548;VDB=0.97746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P272T|855|LOC_Os05g22660|protein_coding|CODING|LOC_Os05g22660.1|2|1) FN3834-S.SNP.5:12876176 chr05:012876176 0 W/12876176-12876176 FN3834-S SNP A -> G AC=2;AN=190;BQB=0.519668;DP=2531;DP4=1248,1111,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15395e-11;MQSB=0.891602;RPB=0.996996;SGB=53.8699;VDB=0.784482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.5:12879183 chr05:012879183 0 W/12879183-12879183 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.683058;DP=2875;DP4=1480,1320,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00070034;MQSB=0.991544;RPB=0.879319;SGB=35.4339;VDB=0.695961;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.5:12881415 chr05:012881415 0 W/12881415-12881415 FN791-S Single Base Substitution G-A INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN791-S.SNP.5:12881416 chr05:012881416 0 W/12881416-12881416 FN791-S Single Base Substitution A-C INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3822-S.SNP.5:12881608 chr05:012881608 0 W/12881608-12881608 FN3822-S SNP G -> T AC=1;AN=190;BQB=0.3126;DP=3094;DP4=1520,1477,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74349e-06;MQSB=0.999997;RPB=0.910719;SGB=39.6545;VDB=0.502073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P351H|394|LOC_Os05g22700|protein_coding|CODING|LOC_Os05g22700.1|3|1) FN3347-S.SNP.5:12882858 chr05:012882858 0 W/12882858-12882858 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.208376;DP=2997;DP4=1516,1397,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.88565e-08;MQSB=0.985184;RPB=0.969969;SGB=98.4821;VDB=0.732367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P9L|394|LOC_Os05g22700|protein_coding|CODING|LOC_Os05g22700.1|1|1) FN2670-S.SNP.5:12886355 chr05:012886355 0 W/12886355-12886355 FN2670-S SNP A -> C AC=1;AN=200;BQB=0.799932;DP=3519;DP4=1349,1965,10,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.65289e-18;MQSB=0.914307;RPB=0.747961;SGB=97.9523;VDB=0.19886;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.5:12892319 chr05:012892319 0 W/12892319-12892319 FN2739-S SNP T -> C AC=1;AN=200;BQB=0.556749;DP=4118;DP4=2231,1706,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.80209e-10;MQSB=0.955634;RPB=0.592737;SGB=29.4849;VDB=0.854591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.5:12893697 chr05:012893697 0 W/12893697-12893697 FN2146-S SNP T -> A AC=2;AN=168;BQB=0.433528;DP=4429;DP4=2294,2077,19,20;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.000451569;MQB=1.3136e-05;MQSB=0.0592322;RPB=0.799912;SGB=80.5243;VDB=0.697118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.5:12894944 chr05:012894944 0 W/12894944-12894944 FN3378-S SNP T -> C AC=1;AN=184;BQB=0.988011;DP=2879;DP4=1363,1368,11,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.13252e-15;MQSB=0.794781;RPB=0.817863;SGB=116.569;VDB=0.958373;EFF=INTERGENIC(MODIFIER||||||||||1) FN471-S.SNP.5:12900802 chr05:012900802 0 W/12900802-12900802 FN471-S Single Base Substitution G-C INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3342-S.SNP.5:12908587 chr05:012908587 0 W/12908587-12908587 FN3342-S SNP T -> C AC=1;AN=184;BQB=0.999753;DP=3064;DP4=1344,1634,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0101175;MQB=2.95449e-06;MQSB=0.545617;RPB=0.248768;SGB=35.7479;VDB=0.900017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.5:12912403 chr05:012912403 0 W/12912403-12912403 FN3861-S SNP C -> A AC=2;AN=158;BQB=0.854473;DP=2432;DP4=1246,1091,15,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.43226e-15;MQSB=0.949172;RPB=0.782021;SGB=130.087;VDB=0.018254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D244Y|615|LOC_Os05g22760|protein_coding|CODING|LOC_Os05g22760.1|1|1) FN469-S.SNP.5:12913823 chr05:012913823 0 W/12913823-12913823 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2258-S.SNP.5:12917430 chr05:012917430 0 W/12917430-12917430 FN2258-S SNP C -> G AC=2;AN=190;BQB=0.199226;DP=3898;DP4=1701,1820,21,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.22794e-22;MQSB=0.71611;RPB=0.943972;SGB=100.276;VDB=0.00443768;EFF=INTRON(MODIFIER||||1253|LOC_Os05g22770|protein_coding|CODING|LOC_Os05g22770.1|1|1) FN1739-S.SNP.5:12918775 chr05:012918775 0 W/12918775-12918775 FN1739-S SNP C -> T AC=1;AN=188;BQB=0.278436;DP=1215;DP4=667,504,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19866e-06;MQSB=0.994307;RPB=0.410768;SGB=20.9896;VDB=0.572753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A107T|1253|LOC_Os05g22770|protein_coding|CODING|LOC_Os05g22770.1|1|1) FN-68.SNP.5:12919962 chr05:012919962 0 W/12919962-12919962 FN-68 Single Base Substitution C-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN-102.SNP.5:12921772 chr05:012921772 0 W/12921772-12921772 FN-102 Single Base Substitution G-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3591-S.SNP.5:12922688 chr05:012922688 0 W/12922688-12922688 FN3591-S SNP A -> C AC=2;AN=188;BQB=0.933017;DP=3320;DP4=1888,1248,26,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.22775e-24;MQSB=0.985212;RPB=0.754403;SGB=94.7451;VDB=0.674282;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.5:12922910 chr05:012922910 0 W/12922910-12922910 FN1571-S Single Base Substitution C-T INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN2231-S.SNP.5:12922910 chr05:012922910 0 W/12922910-12922910 FN2231-S SNP C -> T AC=2;AN=190;BQB=0.894547;DP=4116;DP4=1804,1953,14,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.22217e-15;MQSB=0.524018;RPB=0.882982;SGB=84.9528;VDB=0.877487;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.5:12922910 chr05:012922910 0 W/12922910-12922910 FN4046-S SNP C -> T AC=1;AN=168;BQB=0.536041;DP=2435;DP4=1266,1084,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000108254;MQSB=0.62193;RPB=0.946155;SGB=27.8864;VDB=0.0927458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.5:12926684 chr05:012926684 0 W/12926684-12926684 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.97899;DP=3431;DP4=1637,1717,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64355e-05;MQSB=0.995112;RPB=0.864492;SGB=39.699;VDB=0.920203;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V37|131|LOC_Os05g22790|protein_coding|CODING|LOC_Os05g22790.1|1|1) FN480-S.SNP.5:12931667 chr05:012931667 0 W/12931667-12931667 FN480-S Single Base Substitution T-A INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3468-S.SNP.5:12932663 chr05:012932663 0 W/12932663-12932663 FN3468-S SNP C -> T AC=1;AN=184;BQB=0.986291;DP=2624;DP4=1262,1269,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54576e-11;MQSB=0.994619;RPB=0.74158;SGB=93.9603;VDB=0.207735;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.5:12935844 chr05:012935844 0 W/12935844-12935844 FN770-S Single Base Substitution T-A INTRON HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1061-S.SNP.5:12938447 chr05:012938447 0 W/12938447-12938447 FN1061-S Single Base Substitution G-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-177.SNP.5:12938607 chr05:012938607 0 W/12938607-12938607 FN-177 Single Base Substitution T-G INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN404-S.SNP.5:12942152 chr05:012942152 0 W/12942152-12942152 FN404-S Single Base Substitution G-A INTERGENIC HOMO SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1281-S.SNP.5:12945862 chr05:012945862 0 W/12945862-12945862 FN1281-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g22810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2656-S.SNP.5:12959923 chr05:012959923 0 W/12959923-12959923 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.460945;DP=7372;DP4=4228,2391,15,13;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.0965817;MQB=0.187108;MQSB=0;RPB=0.00861081;SGB=58.1418;VDB=0.76923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S22N|171|LOC_Os05g22840|protein_coding|CODING|LOC_Os05g22840.1|2|1) FN1227-S.SNP.5:12968172 chr05:012968172 0 W/12968172-12968172 FN1227-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g22850 retrotransposon protein, putative, unclassified, expressed SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1348-S.SNP.5:12988121 chr05:012988121 0 W/12988121-12988121 FN1348-S Single Base Substitution A-G INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3997-S.SNP.5:12990817 chr05:012990817 0 W/12990817-12990817 FN3997-S SNP T -> A AC=1;AN=168;BQB=0.959315;DP=2718;DP4=1300,1317,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.55764e-07;MQSB=0.999804;RPB=0.914931;SGB=24.4556;VDB=0.727692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E434V|757|LOC_Os05g22870|protein_coding|CODING|LOC_Os05g22870.1|2|1) FN621-S.SNP.5:12992729 chr05:012992729 0 W/12992729-12992729 FN621-S Single Base Substitution C-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2468.SNP.5:12993030 chr05:012993030 0 W/12993030-12993030 FN2468 SNP C -> A AC=1;AN=200;BQB=0.998985;DP=3910;DP4=1451,2231,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.39319e-07;MQSB=0.367059;RPB=0.999499;SGB=1.46408;VDB=0.553116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.5:12997757 chr05:012997757 0 W/12997757-12997757 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.912642;DP=3917;DP4=2068,1616,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2871e-13;MQSB=0.695432;RPB=0.852397;SGB=65.3149;VDB=0.225512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.5:13000147 chr05:013000147 0 W/13000147-13000147 FN3740-S SNP T -> C AC=1;AN=190;BQB=0.957946;DP=3050;DP4=1414,1523,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000232693;MQSB=0.99843;RPB=0.889752;SGB=21.7749;VDB=0.817917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.5:13001297 chr05:013001297 0 W/13001297-13001297 FN2483 SNP A -> G AC=1;AN=200;BQB=0.134246;DP=4833;DP4=2261,2316,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.47274e-15;MQSB=0.922937;RPB=0.895184;SGB=58.1418;VDB=0.60794;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.5:13003698 chr05:013003698 0 W/13003698-13003698 FN3310-S SNP T -> G AC=1;AN=184;BQB=0.978491;DP=2698;DP4=1270,1356,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75276e-05;MQSB=0.857179;RPB=0.325216;SGB=44.2207;VDB=0.316268;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.5:13014830 chr05:013014830 0 W/13014830-13014830 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.993397;DP=2703;DP4=1391,1226,10,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.42277e-12;MQSB=0.987179;RPB=0.289188;SGB=78.7577;VDB=0.326164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.5:13014831 chr05:013014831 0 W/13014831-13014831 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.97074;DP=2719;DP4=1360,1239,11,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.73252e-12;MQSB=0.994251;RPB=0.506825;SGB=58.7637;VDB=0.350399;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.5:13015996 chr05:013015996 0 W/13015996-13015996 FN518-S Single Base Substitution T-C INTRON HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2701-S.SNP.5:13017311 chr05:013017311 0 W/13017311-13017311 FN2701-S SNP A -> T AC=1;AN=200;BQB=0.851912;DP=4810;DP4=2433,2182,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.96299e-17;MQSB=0.215885;RPB=0.963151;SGB=68.5625;VDB=0.0857247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C345S|571|LOC_Os05g22900|protein_coding|CODING|LOC_Os05g22900.1|4|1) FN2532-S.SNP.5:13021081 chr05:013021081 0 W/13021081-13021081 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.732566;DP=4029;DP4=1866,1995,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.28179e-07;MQSB=0.933855;RPB=0.99787;SGB=65.3149;VDB=0.965618;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K287|781|LOC_Os05g22910|protein_coding|CODING|LOC_Os05g22910.1|1|1) FN3488-S.SNP.5:13021605 chr05:013021605 0 W/13021605-13021605 FN3488-S SNP C -> T AC=2;AN=184;BQB=0.889384;DP=3051;DP4=1569,1391,11,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.1141e-16;MQSB=0.845371;RPB=0.984304;SGB=116.569;VDB=0.402962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V113I|781|LOC_Os05g22910|protein_coding|CODING|LOC_Os05g22910.1|1|1) W500-4-7-1.SNP.5:13022920 chr05:013022920 0 W/13022920-13022920 W500-4-7-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2351.SNP.5:13022963 chr05:013022963 0 W/13022963-13022963 FN2351 SNP G -> A AC=2;AN=192;BQB=0.979736;DP=4676;DP4=2101,2078,25,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.19904e-21;MQSB=0.811467;RPB=0.583584;SGB=100.716;VDB=0.439661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.5:13026739 chr05:013026739 0 W/13026739-13026739 FN2137-S SNP T -> C AC=2;AN=168;BQB=0.589545;DP=2460;DP4=1091,1282,20,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.4904e-19;MQSB=0.999124;RPB=0.483421;SGB=-0.689637;VDB=0.0350077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.5:13034788 chr05:013034788 0 W/13034788-13034788 FN2254-S SNP A -> T AC=2;AN=190;BQB=0.0794963;DP=5015;DP4=2363,2376,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.01001e-11;MQSB=0.769889;RPB=0.463896;SGB=75.1932;VDB=0.409395;EFF=INTRON(MODIFIER||||664|LOC_Os05g22920|protein_coding|CODING|LOC_Os05g22920.1|9|1),INTRON(MODIFIER||||570|LOC_Os05g22920|protein_coding|CODING|LOC_Os05g22920.2|8|1),INTRON(MODIFIER||||382|LOC_Os05g22920|protein_coding|CODING|LOC_Os05g22920.4|9|1) FN3565-S.SNP.5:13047214 chr05:013047214 0 W/13047214-13047214 FN3565-S SNP C -> T AC=1;AN=188;BQB=0.895606;DP=2752;DP4=1289,1386,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.24343e-12;MQSB=0.954796;RPB=0.256161;SGB=80.782;VDB=0.466399;EFF=INTERGENIC(MODIFIER||||||||||1) FN-91.SNP.5:13052314 chr05:013052314 0 W/13052314-13052314 FN-91 Single Base Substitution T-C INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN2730-S.SNP.5:13070834 chr05:013070834 0 W/13070834-13070834 FN2730-S SNP A -> G AC=1;AN=200;BQB=0.119943;DP=4910;DP4=2529,2105,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203666;MQB=1.27641e-10;MQSB=0.831527;RPB=0.516346;SGB=-11.2947;VDB=0.772031;EFF=INTRON(MODIFIER||||2414|LOC_Os05g22940|protein_coding|CODING|LOC_Os05g22940.1|22|1) FN2470.SNP.5:13071491 chr05:013071491 0 W/13071491-13071491 FN2470 SNP A -> G AC=1;AN=200;BQB=0.927482;DP=5109;DP4=2541,2232,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9711e-07;MQSB=0.999889;RPB=0.866444;SGB=19.0642;VDB=0.142512;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S842|2414|LOC_Os05g22940|protein_coding|CODING|LOC_Os05g22940.1|20|1) FN3465-S.SNP.5:13084230 chr05:013084230 0 W/13084230-13084230 FN3465-S SNP A -> T AC=1;AN=184;BQB=0.598265;DP=2542;DP4=1192,1245,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.85244e-10;MQSB=0.377833;RPB=0.740274;SGB=63.9222;VDB=0.802399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.5:13087256 chr05:013087256 0 W/13087256-13087256 FN1204-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2350.SNP.5:13089852 chr05:013089852 0 W/13089852-13089852 FN2350 SNP T -> C AC=2;AN=192;BQB=0.547191;DP=5192;DP4=2627,2330,25,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.17855e-25;MQSB=0.936479;RPB=0.42703;SGB=157.404;VDB=0.337763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.5:13102503 chr05:013102503 0 W/13102503-13102503 FN3569-S SNP T -> G AC=1;AN=188;BQB=0.773384;DP=4030;DP4=1235,2094,30,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00297767;MQB=1.47446e-11;MQSB=0.731951;RPB=0.396973;SGB=-665.862;VDB=0.782947;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.5:13104736 chr05:013104736 0 W/13104736-13104736 FN-221 Single Base Substitution C-T INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3770-S.SNP.5:13109564 chr05:013109564 0 W/13109564-13109564 FN3770-S SNP G -> A AC=1;AN=190;BQB=0.994658;DP=2742;DP4=1158,1502,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80406e-08;MQSB=0.894213;RPB=0.0947363;SGB=32.5467;VDB=0.320291;EFF=INTRON(MODIFIER||||882|LOC_Os05g22990|protein_coding|CODING|LOC_Os05g22990.1|11|1) FN-105.SNP.5:13117409 chr05:013117409 0 W/13117409-13117409 FN-105 Single Base Substitution C-G INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN-168.SNP.5:13119792 chr05:013119792 0 W/13119792-13119792 FN-168 Single Base Substitution A-T INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN625-S.SNP.5:13143154 chr05:013143154 0 W/13143154-13143154 FN625-S Single Base Substitution C-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1073-S.SNP.5:13143699 chr05:013143699 0 W/13143699-13143699 FN1073-S Single Base Substitution C-T INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2463.SNP.5:13147934 chr05:013147934 0 W/13147934-13147934 FN2463 SNP T -> G AC=1;AN=200;BQB=0.789155;DP=4040;DP4=2390,1220,6,5;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.218812;MQB=0.85739;MQSB=0;RPB=0.9979;SGB=29.4541;VDB=0.875639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.5:13147986 chr05:013147986 0 W/13147986-13147986 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.844234;DP=4495;DP4=2460,1753,23,8;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0803115;MQB=0.250671;MQSB=3.73035e-05;RPB=0.323842;SGB=-183.244;VDB=0.920156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.5:13149914 chr05:013149914 0 W/13149914-13149914 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.961324;DP=4950;DP4=3033,1788,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.141616;MQB=0.909014;MQSB=0;RPB=0.876068;SGB=39.699;VDB=0.244343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R369H|980|LOC_Os05g23070|protein_coding|CODING|LOC_Os05g23070.1|3|1) FN1000-S.SNP.5:13153224 chr05:013153224 0 W/13153224-13153224 FN1000-S Single Base Substitution C-T INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3836-S.SNP.5:13179712 chr05:013179712 0 W/13179712-13179712 FN3836-S SNP T -> G AC=1;AN=190;BQB=0.734024;DP=2700;DP4=1072,1544,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000740741;MQB=4.63985e-07;MQSB=0.977416;RPB=0.689911;SGB=50.3161;VDB=0.463632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.5:13180241 chr05:013180241 0 W/13180241-13180241 FN2164-S SNP G -> T AC=1;AN=168;BQB=0.867586;DP=2748;DP4=1658,1044,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.99501e-07;MQSB=0.884218;RPB=0.145233;SGB=-15.3725;VDB=0.907298;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.5:13180573 chr05:013180573 0 W/13180573-13180573 FN474-S Single Base Substitution C-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN733-S.SNP.5:13180891 chr05:013180891 0 W/13180891-13180891 FN733-S Single Base Substitution T-A INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN3811-S.SNP.5:13186045 chr05:013186045 0 W/13186045-13186045 FN3811-S SNP A -> T AC=1;AN=190;BQB=0.406112;DP=2129;DP4=855,1108,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29448e-06;MQSB=0.768628;RPB=0.986144;SGB=-0.550503;VDB=0.554125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.5:13191325 chr05:013191325 0 W/13191325-13191325 FN-93 Single Base Substitution C-A INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3296-S.SNP.5:13200654 chr05:013200654 0 W/13200654-13200654 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.88546;DP=3298;DP4=1647,1420,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00121286;MQB=1.23876e-07;MQSB=2.03339e-11;RPB=0.297988;SGB=39.2697;VDB=0.920134;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.5:13207047 chr05:013207047 0 W/13207047-13207047 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.972877;DP=2688;DP4=1428,1172,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.190476;MQB=0.158281;MQSB=0;RPB=0.0170561;SGB=90.0802;VDB=0.0272049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1238D|1906|LOC_Os05g23150|protein_coding|CODING|LOC_Os05g23150.1|2|1) FN3725-S.SNP.5:13207048 chr05:013207048 0 W/13207048-13207048 FN3725-S SNP C -> A AC=1;AN=190;BQB=0.807709;DP=2707;DP4=1446,1167,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.191725;MQB=0.175325;MQSB=0;RPB=0.0283898;SGB=80.9724;VDB=0.100676;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G1238|1906|LOC_Os05g23150|protein_coding|CODING|LOC_Os05g23150.1|2|1) FN1290-S.SNP.5:13224203 chr05:013224203 0 W/13224203-13224203 FN1290-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g23190 retrotransposon protein, putative, unclassified, expressed SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN909-S.SNP.5:13225335 chr05:013225335 0 W/13225335-13225335 FN909-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g23190 retrotransposon protein, putative, unclassified, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN_1017-1.SNP.5:13231904 chr05:013231904 0 W/13231904-13231904 FN_1017-1 Single Base Substitution G-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2651-S.SNP.5:13233611 chr05:013233611 0 W/13233611-13233611 FN2651-S SNP C -> A AC=1;AN=200;BQB=0.958831;DP=5324;DP4=2962,2084,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76013e-14;MQSB=0.864611;RPB=0.373852;SGB=52.9314;VDB=0.0796764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.5:13248569 chr05:013248569 0 W/13248569-13248569 FN1528-S Single Base Substitution C-G INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN-195.SNP.5:13249914 chr05:013249914 0 W/13249914-13249914 FN-195 Single Base Substitution G-C INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN409-S.SNP.5:13252411 chr05:013252411 0 W/13252411-13252411 FN409-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3297-S.SNP.5:13256073 chr05:013256073 0 W/13256073-13256073 FN3297-S SNP T -> C AC=2;AN=184;BQB=0.418351;DP=2830;DP4=1510,1223,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.97268e-11;MQSB=0.0752871;RPB=0.530668;SGB=70.9657;VDB=0.231143;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.5:13256513 chr05:013256513 0 W/13256513-13256513 FN229-S Single Base Substitution C-G INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2634-S.SNP.5:13260095 chr05:013260095 0 W/13260095-13260095 FN2634-S SNP T -> A AC=1;AN=200;BQB=0.999663;DP=4069;DP4=1816,1960,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000245761;MQB=9.59899e-13;MQSB=0.980811;RPB=0.570013;SGB=61.9006;VDB=0.922916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.5:13262739 chr05:013262739 0 W/13262739-13262739 FN2426 SNP C -> A AC=1;AN=200;BQB=0.889347;DP=5015;DP4=2247,2385,19,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199402;MQB=6.89212e-23;MQSB=0.550185;RPB=0.831562;SGB=-46.3708;VDB=0.125094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1657-S.SNP.5:13268651 chr05:013268651 0 W/13268651-13268651 FN1657-S Single Base Substitution C-A INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN-332.SNP.5:13273413 chr05:013273413 0 W/13273413-13273413 FN-332 Single Base Substitution C-T INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1102-S.SNP.5:13275464 chr05:013275464 0 W/13275464-13275464 FN1102-S Single Base Substitution C-T INTRON HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3987-S.SNP.5:13286705 chr05:013286705 0 W/13286705-13286705 FN3987-S SNP T -> A AC=1;AN=168;BQB=0.874259;DP=2578;DP4=1246,1197,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97596e-09;MQSB=0.570816;RPB=0.792989;SGB=4.1907;VDB=0.293362;EFF=INTRON(MODIFIER||||145|LOC_Os05g23270|protein_coding|CODING|LOC_Os05g23270.1|1|1) FN922-S.SNP.5:13287929 chr05:013287929 0 W/13287929-13287929 FN922-S Single Base Substitution T-C INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3430-S.SNP.5:13299524 chr05:013299524 0 W/13299524-13299524 FN3430-S SNP G -> A AC=1;AN=184;BQB=0.95727;DP=3394;DP4=1389,1923,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00383029;MQB=0.0796483;MQSB=0.0536896;RPB=0.994908;SGB=39.699;VDB=0.878682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.5:13299575 chr05:013299575 0 W/13299575-13299575 FN2473 SNP C -> T AC=2;AN=200;BQB=0.0340441;DP=4581;DP4=2330,1929,15,16;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0211744;MQB=0.036227;MQSB=7.9647e-10;RPB=0.978293;SGB=65.9573;VDB=0.687037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.5:13305800 chr05:013305800 0 W/13305800-13305800 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.997764;DP=5173;DP4=2598,2328,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34619e-12;MQSB=0.984937;RPB=0.456588;SGB=39.9056;VDB=0.795046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.5:13310234 chr05:013310234 0 W/13310234-13310234 FN1570-S Single Base Substitution A-G INTRON Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2423.SNP.5:13316143 chr05:013316143 0 W/13316143-13316143 FN2423 SNP C -> T AC=1;AN=200;BQB=0.979104;DP=4859;DP4=2492,2139,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89103e-12;MQSB=0.963355;RPB=0.777965;SGB=91.1059;VDB=0.91008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.5:13334365 chr05:013334365 0 W/13334365-13334365 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.303724;DP=4068;DP4=1806,1951,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.68922e-14;MQSB=0.676058;RPB=0.997545;SGB=50.1053;VDB=0.127905;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.5:13338073 chr05:013338073 0 W/13338073-13338073 FN549-S Single Base Substitution G-A INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN1429-S.SNP.5:13343395 chr05:013343395 0 W/13343395-13343395 FN1429-S Single Base Substitution C-A INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1429-S.SNP.5:13343396 chr05:013343396 0 W/13343396-13343396 FN1429-S Single Base Substitution T-A INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3534-S.SNP.5:13366940 chr05:013366940 0 W/13366940-13366940 FN3534-S SNP C -> T AC=1;AN=188;BQB=0.892485;DP=3523;DP4=2203,1233,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000283849;MQB=5.81506e-06;MQSB=0.273681;RPB=0.929283;SGB=39.5276;VDB=0.315657;EFF=UTR_5_PRIME(MODIFIER||280||79|LOC_Os05g23393|protein_coding|CODING|LOC_Os05g23393.1|1|1) FN1717-S.SNP.5:13367890 chr05:013367890 0 W/13367890-13367890 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.0914846;DP=2769;DP4=1333,1378,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.65278e-08;MQSB=0.925738;RPB=0.67049;SGB=-12.8266;VDB=0.191835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.5:13368214 chr05:013368214 0 W/13368214-13368214 FN2575-S SNP A -> G AC=1;AN=198;BQB=0.584038;DP=3863;DP4=1736,1853,18,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00876e-19;MQSB=0.742897;RPB=0.999924;SGB=86.437;VDB=0.672779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.5:13368723 chr05:013368723 0 W/13368723-13368723 FN3983-S SNP C -> G AC=1;AN=168;BQB=0.975521;DP=2526;DP4=1328,1110,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.52007e-05;MQSB=0.938954;RPB=0.44197;SGB=30.0193;VDB=0.405689;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.5:13371817 chr05:013371817 0 W/13371817-13371817 FN858-S Single Base Substitution C-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN910-S.SNP.5:13380304 chr05:013380304 0 W/13380304-13380304 FN910-S Single Base Substitution A-T INTRON HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3296-S.SNP.5:13382716 chr05:013382716 0 W/13382716-13382716 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.892006;DP=2997;DP4=1817,1116,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.813e-08;MQSB=0.932887;RPB=0.809056;SGB=42.7914;VDB=0.747415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R207H|444|LOC_Os05g23420|protein_coding|CODING|LOC_Os05g23420.1|1|1) FN1072-S.SNP.5:13384576 chr05:013384576 0 W/13384576-13384576 FN1072-S Single Base Substitution A-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN4176-S.SNP.5:13385552 chr05:013385552 0 W/13385552-13385552 FN4176-S SNP T -> A AC=2;AN=170;BQB=0.998989;DP=2485;DP4=1269,1152,8,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.45209e-08;MQSB=0.978072;RPB=0.888248;SGB=56.7575;VDB=0.0621896;EFF=UTR_3_PRIME(MODIFIER||123||181|LOC_Os05g23430|protein_coding|CODING|LOC_Os05g23430.2|13|1) FN962-S.SNP.5:13389400 chr05:013389400 0 W/13389400-13389400 FN962-S Single Base Substitution T-A START_GAINED HET LOC_Os05g23430 WD domain, G-beta repeat domain containing protein, expressed SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN962-S.SNP.5:13389401 chr05:013389401 0 W/13389401-13389401 FN962-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN520-S.SNP.5:13391861 chr05:013391861 0 W/13391861-13391861 FN520-S Single Base Substitution A-T INTERGENIC HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3868-S.SNP.5:13396837 chr05:013396837 0 W/13396837-13396837 FN3868-S SNP T -> C AC=1;AN=158;BQB=0.885724;DP=2660;DP4=1219,1360,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.22452e-07;MQSB=0.955259;RPB=0.658809;SGB=34.0735;VDB=0.212892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.5:13397220 chr05:013397220 0 W/13397220-13397220 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.63917;DP=4940;DP4=2583,2052,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.85472e-09;MQSB=0.921262;RPB=0.855365;SGB=65.5058;VDB=0.963577;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.5:13398004 chr05:013398004 0 W/13398004-13398004 FN4202-S SNP G -> T AC=1;AN=170;BQB=0.970719;DP=2535;DP4=1124,1344,10,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.35436e-12;MQSB=0.914759;RPB=0.510111;SGB=87.856;VDB=0.309719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.5:13399735 chr05:013399735 0 W/13399735-13399735 FN2608-S SNP T -> A AC=1;AN=198;BQB=0.983492;DP=4313;DP4=2088,2007,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17311e-07;MQSB=0.952543;RPB=0.998612;SGB=18.9639;VDB=0.35082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.5:13399737 chr05:013399737 0 W/13399737-13399737 FN2608-S SNP T -> A AC=1;AN=198;BQB=0.929062;DP=4359;DP4=2101,2007,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06172e-07;MQSB=0.861243;RPB=0.832502;SGB=29.3637;VDB=0.233702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.5:13406371 chr05:013406371 0 W/13406371-13406371 FN1665-S Single Base Substitution A-G INTRON HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1353-S.SNP.5:13411939 chr05:013411939 0 W/13411939-13411939 FN1353-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g23450 expressed protein SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3549-S.SNP.5:13418615 chr05:013418615 0 W/13418615-13418615 FN3549-S SNP A -> T AC=1;AN=188;BQB=0.701994;DP=2883;DP4=1401,1382,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08757e-07;MQSB=0.996894;RPB=0.857524;SGB=28.6195;VDB=0.982556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.5:13432304 chr05:013432304 0 W/13432304-13432304 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.945078;DP=2245;DP4=978,1171,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.02002e-07;MQSB=0.792884;RPB=0.933925;SGB=32.2261;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.5:13436916 chr05:013436916 0 W/13436916-13436916 FN1658-S SNP G -> T AC=2;AN=188;BQB=0.387722;DP=2964;DP4=734,2189,6,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07065e-13;MQSB=0.866125;RPB=0.809395;SGB=-6.85034;VDB=0.248873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.5:13437287 chr05:013437287 0 W/13437287-13437287 FN2587-S SNP A -> G AC=1;AN=198;BQB=0.769753;DP=3969;DP4=1781,1670,7,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.8921e-12;MQSB=0.354588;RPB=0.379596;SGB=76.1002;VDB=0.0989763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.5:13437460 chr05:013437460 0 W/13437460-13437460 FN1103-S Single Base Substitution C-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3305-S.SNP.5:13438289 chr05:013438289 0 W/13438289-13438289 FN3305-S SNP C -> T AC=1;AN=184;BQB=0.821469;DP=2909;DP4=1264,1488,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31538e-06;MQSB=0.997176;RPB=0.981882;SGB=32.2261;VDB=0.713589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.5:13442057 chr05:013442057 0 W/13442057-13442057 FN3897-S SNP C -> A AC=2;AN=158;BQB=0.934111;DP=2636;DP4=1415,1082,22,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.0728e-24;MQSB=0.963613;RPB=0.967014;SGB=182.52;VDB=0.286727;EFF=INTRON(MODIFIER||||105|LOC_Os05g23490|protein_coding|CODING|LOC_Os05g23490.1|1|1) FN795-S.SNP.5:13444333 chr05:013444333 0 W/13444333-13444333 FN795-S Single Base Substitution A-T INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1035-S.SNP.5:13447675 chr05:013447675 0 W/13447675-13447675 FN1035-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3853-S.SNP.5:13450409 chr05:013450409 0 W/13450409-13450409 FN3853-S SNP T -> C AC=1;AN=158;BQB=0.674929;DP=2638;DP4=1199,1245,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000456744;MQSB=0.992604;RPB=0.569262;SGB=27.3346;VDB=0.0209956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.5:13452254 chr05:013452254 0 W/13452254-13452254 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.868115;DP=4132;DP4=2053,1875,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242014;MQB=1.87147e-10;MQSB=0.999618;RPB=0.744461;SGB=26.7492;VDB=0.288703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1700-S.SNP.5:13454900 chr05:013454900 0 W/13454900-13454900 FN1700-S SNP A -> G AC=2;AN=188;BQB=0.261047;DP=2256;DP4=1159,1036,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6614e-13;MQSB=0.995035;RPB=0.884516;SGB=22.5144;VDB=0.348605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.5:13454900 chr05:013454900 0 W/13454900-13454900 FN2628-S SNP A -> G AC=2;AN=200;BQB=0.402202;DP=4651;DP4=2296,2105,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.58247e-26;MQSB=0.969427;RPB=0.698697;SGB=201.63;VDB=0.694078;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.5:13454900 chr05:013454900 0 W/13454900-13454900 FN3596-S SNP A -> G AC=2;AN=188;BQB=0.996746;DP=3030;DP4=1513,1396,16,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.17315e-14;MQSB=0.986385;RPB=0.574873;SGB=117.128;VDB=0.869901;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.5:13454900 chr05:013454900 0 W/13454900-13454900 FN462-S Single Base Substitution A-G INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2311.SNP.5:13474042 chr05:013474042 0 W/13474042-13474042 FN2311 SNP C -> T AC=1;AN=192;BQB=0.230673;DP=4613;DP4=1865,2495,19,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.67681e-17;MQSB=0.983017;RPB=0.550124;SGB=37.0774;VDB=0.740866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.5:13474709 chr05:013474709 0 W/13474709-13474709 FN3806-S SNP T -> C AC=1;AN=190;BQB=0.949332;DP=2659;DP4=1425,1141,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37884e-05;MQSB=0.99844;RPB=0.466469;SGB=25.439;VDB=0.448353;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.5:13476475 chr05:013476475 0 W/13476475-13476475 FN_N1-150-1 Single Base Substitution G-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN4098-S.SNP.5:13478402 chr05:013478402 0 W/13478402-13478402 FN4098-S SNP T -> A AC=1;AN=182;BQB=0.999094;DP=2235;DP4=930,1243,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.60999e-13;MQSB=0.973885;RPB=0.227671;SGB=84.7091;VDB=0.0098122;EFF=INTRON(MODIFIER||||615|LOC_Os05g23530|protein_coding|CODING|LOC_Os05g23530.1|5|1),INTRON(MODIFIER||||591|LOC_Os05g23530|protein_coding|CODING|LOC_Os05g23530.2|5|1),INTRON(MODIFIER||||615|LOC_Os05g23530|protein_coding|CODING|LOC_Os05g23530.4|5|1) FN1655-S.SNP.5:13500907 chr05:013500907 0 W/13500907-13500907 FN1655-S Single Base Substitution G-A INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN987-S.SNP.5:13501138 chr05:013501138 0 W/13501138-13501138 FN987-S Single Base Substitution C-T INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN-187.SNP.5:13505237 chr05:013505237 0 W/13505237-13505237 FN-187 Single Base Substitution G-C INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2488.SNP.5:13505681 chr05:013505681 0 W/13505681-13505681 FN2488 SNP T -> G AC=2;AN=200;BQB=0.999964;DP=4256;DP4=1944,1890,12,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.23095e-20;MQSB=0.993741;RPB=0.844493;SGB=-46.3708;VDB=0.769765;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.5:13509023 chr05:013509023 0 W/13509023-13509023 FN-277 Single Base Substitution G-A INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1268-S.SNP.5:13514488 chr05:013514488 0 W/13514488-13514488 FN1268-S Single Base Substitution C-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2209-S.SNP.5:13517100 chr05:013517100 0 W/13517100-13517100 FN2209-S SNP T -> C AC=2;AN=190;BQB=0.0789108;DP=4019;DP4=1211,1681,29,33;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.80188e-24;MQSB=0.0774683;RPB=0.355206;SGB=-13.3224;VDB=0.67653;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.5:13518996 chr05:013518996 0 W/13518996-13518996 FN1504-S Single Base Substitution A-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2435.SNP.5:13537109 chr05:013537109 0 W/13537109-13537109 FN2435 SNP C -> A AC=2;AN=200;BQB=0.701911;DP=2506;DP4=399,1916,2,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.55337e-13;MQSB=0.999883;RPB=0.438872;SGB=72.7161;VDB=0.272428;EFF=INTRON(MODIFIER||||165|LOC_Os05g23610|protein_coding|CODING|LOC_Os05g23610.1|1|1) FN3368-S.SNP.5:13540701 chr05:013540701 0 W/13540701-13540701 FN3368-S SNP G -> A AC=2;AN=184;BQB=0.770652;DP=2714;DP4=1235,1375,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.59669e-16;MQSB=0.995963;RPB=0.950612;SGB=106.184;VDB=0.701556;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P163|165|LOC_Os05g23610|protein_coding|CODING|LOC_Os05g23610.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P128|130|LOC_Os05g23610|protein_coding|CODING|LOC_Os05g23610.2|3|1) FN3424-S.SNP.5:13541038 chr05:013541038 0 W/13541038-13541038 FN3424-S SNP G -> T AC=1;AN=184;BQB=0.983073;DP=2737;DP4=1106,1541,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.70176e-09;MQSB=0.999199;RPB=0.954881;SGB=42.7914;VDB=0.831512;EFF=UTR_3_PRIME(MODIFIER||328||165|LOC_Os05g23610|protein_coding|CODING|LOC_Os05g23610.1|5|1),UTR_3_PRIME(MODIFIER||328||130|LOC_Os05g23610|protein_coding|CODING|LOC_Os05g23610.2|3|1) FN2188-S.SNP.5:13542333 chr05:013542333 0 W/13542333-13542333 FN2188-S SNP G -> T AC=1;AN=190;BQB=0.981569;DP=4623;DP4=2071,2215,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22474e-10;MQSB=0.999112;RPB=0.761511;SGB=67.3108;VDB=0.890202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.5:13565242 chr05:013565242 0 W/13565242-13565242 FN2781-S SNP A -> C AC=2;AN=198;BQB=0.981101;DP=4694;DP4=2205,2191,28,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.54525e-29;MQSB=0.99945;RPB=0.0215907;SGB=183.954;VDB=0.202951;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.5:13567176 chr05:013567176 0 W/13567176-13567176 FN1585-S Single Base Substitution T-C INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3676-S.SNP.5:13570836 chr05:013570836 0 W/13570836-13570836 FN3676-S SNP A -> C AC=1;AN=190;BQB=0.994982;DP=3089;DP4=1432,1566,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.66939e-09;MQSB=0.999843;RPB=0.396683;SGB=28.7675;VDB=0.36917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.5:13573569 chr05:013573569 0 W/13573569-13573569 FN2109-S SNP G -> A AC=1;AN=168;BQB=0.654371;DP=3951;DP4=1969,1924,13,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.22114e-14;MQSB=0.868345;RPB=0.887951;SGB=-123.754;VDB=0.364451;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.5:13573570 chr05:013573570 0 W/13573570-13573570 FN2109-S SNP G -> T AC=1;AN=168;BQB=0.636222;DP=3957;DP4=1957,1940,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.55669e-13;MQSB=0.825638;RPB=0.997934;SGB=-126.323;VDB=0.437907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.5:13573573 chr05:013573573 0 W/13573573-13573573 FN2109-S SNP T -> G AC=1;AN=168;BQB=0.999712;DP=3922;DP4=1927,1947,13,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01509e-16;MQSB=0.853959;RPB=0.204072;SGB=56.2162;VDB=0.156954;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.5:13584803 chr05:013584803 0 W/13584803-13584803 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.990813;DP=2924;DP4=1232,1595,11,23;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.95814e-21;MQSB=0.987513;RPB=0.962654;SGB=109.356;VDB=0.364451;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.5:13594042 chr05:013594042 0 W/13594042-13594042 FN1278-S Single Base Substitution T-C INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3858-S.SNP.5:13595853 chr05:013595853 0 W/13595853-13595853 FN3858-S SNP C -> G AC=1;AN=158;BQB=0.999863;DP=2615;DP4=1212,1249,12,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.65486e-14;MQSB=0.933691;RPB=0.521426;SGB=64.3985;VDB=0.141462;EFF=INTRON(MODIFIER||||169|LOC_Os05g23680|protein_coding|CODING|LOC_Os05g23680.1|1|1) FN-188.SNP.5:13604792 chr05:013604792 0 W/13604792-13604792 FN-188 Single Base Substitution G-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2412.SNP.5:13605367 chr05:013605367 0 W/13605367-13605367 FN2412 SNP A -> T AC=1;AN=200;BQB=0.80313;DP=5151;DP4=2330,2552,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53126e-16;MQSB=0.911048;RPB=0.974672;SGB=55.5366;VDB=0.357949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.5:13605368 chr05:013605368 0 W/13605368-13605368 FN2412 SNP A -> T AC=1;AN=200;BQB=0.487945;DP=5154;DP4=2350,2565,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11259e-16;MQSB=0.98024;RPB=0.675036;SGB=109.527;VDB=0.217665;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.5:13610331 chr05:013610331 0 W/13610331-13610331 FN587-S Single Base Substitution C-T INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2207-S.SNP.5:13618174 chr05:013618174 0 W/13618174-13618174 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.454063;DP=4958;DP4=2645,1907,17,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73821e-11;MQSB=0.830519;RPB=0.991329;SGB=-11.5603;VDB=0.826816;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.5:13619248 chr05:013619248 0 W/13619248-13619248 FN4163-S SNP A -> T AC=1;AN=170;BQB=0.837343;DP=2827;DP4=1527,1191,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.85319e-06;MQSB=0.85921;RPB=0.909484;SGB=34.878;VDB=0.376676;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.5:13629248 chr05:013629248 0 W/13629248-13629248 FN512-S Single Base Substitution A-C INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN-240.SNP.5:13629430 chr05:013629430 0 W/13629430-13629430 FN-240 Single Base Substitution A-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN-240.SNP.5:13629438 chr05:013629438 0 W/13629438-13629438 FN-240 Single Base Substitution A-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1515-S.SNP.5:13630192 chr05:013630192 0 W/13630192-13630192 FN1515-S Single Base Substitution C-T INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN499-S.SNP.5:13650792 chr05:013650792 0 W/13650792-13650792 FN499-S Single Base Substitution G-A INTERGENIC HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4189-S.SNP.5:13657156 chr05:013657156 0 W/13657156-13657156 FN4189-S SNP G -> A AC=2;AN=170;BQB=0.487801;DP=2211;DP4=911,1218,6,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.09324e-09;MQSB=0.99603;RPB=0.719537;SGB=34.5398;VDB=0.792507;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.5:13661896 chr05:013661896 0 W/13661896-13661896 FN4172-S SNP A -> G AC=1;AN=170;BQB=0.998793;DP=2485;DP4=1130,1255,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.68408e-07;MQSB=0.976869;RPB=0.0308901;SGB=27.9928;VDB=0.0246807;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.5:13661898 chr05:013661898 0 W/13661898-13661898 FN4172-S SNP G -> A AC=1;AN=170;BQB=0.904484;DP=2481;DP4=1164,1263,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.62563e-07;MQSB=0.967705;RPB=0.0138751;SGB=38.987;VDB=0.00389073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.5:13677550 chr05:013677550 0 W/13677550-13677550 FN2372 SNP A -> C AC=1;AN=192;BQB=0.999305;DP=4925;DP4=2383,2346,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0601e-18;MQSB=0.86907;RPB=0.788095;SGB=67.3792;VDB=0.598845;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.5:13678420 chr05:013678420 0 W/13678420-13678420 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN_N1-150-1.SNP.5:13678962 chr05:013678962 0 W/13678962-13678962 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN770-S.SNP.5:13682218 chr05:013682218 0 W/13682218-13682218 FN770-S Single Base Substitution C-A INTRON HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2317.SNP.5:13684203 chr05:013684203 0 W/13684203-13684203 FN2317 SNP T -> A AC=2;AN=192;BQB=1;DP=4903;DP4=2281,2406,25,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.43662e-21;MQSB=0.398728;RPB=0.0125997;SGB=87.8939;VDB=0.0150986;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K746*|1196|LOC_Os05g23810|protein_coding|CODING|LOC_Os05g23810.1|2|1);LOF=(LOC_Os05g23810|LOC_Os05g23810|1|1.00);NMD=(LOC_Os05g23810|LOC_Os05g23810|1|1.00) FN2273-S.SNP.5:13686113 chr05:013686113 0 W/13686113-13686113 FN2273-S SNP A -> G AC=2;AN=190;BQB=0.976265;DP=4157;DP4=1912,1857,20,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.00788e-15;MQSB=0.652932;RPB=0.0990088;SGB=33.6348;VDB=0.343188;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D203|1196|LOC_Os05g23810|protein_coding|CODING|LOC_Os05g23810.1|1|1) FN1108-S.SNP.5:13687749 chr05:013687749 0 W/13687749-13687749 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3971-S.SNP.5:13689512 chr05:013689512 0 W/13689512-13689512 FN3971-S SNP C -> T AC=2;AN=168;BQB=0.729744;DP=2772;DP4=1266,1317,9,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.32085e-07;MQSB=0.979404;RPB=0.365049;SGB=22.1847;VDB=0.512385;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.5:13694118 chr05:013694118 0 W/13694118-13694118 FN511-S Single Base Substitution T-C INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN2617-S.SNP.5:13700499 chr05:013700499 0 W/13700499-13700499 FN2617-S SNP G -> C AC=1;AN=198;BQB=0.637676;DP=4274;DP4=2160,1889,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.14029e-14;MQSB=0.69288;RPB=0.978019;SGB=94.0758;VDB=0.227731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.5:13708645 chr05:013708645 0 W/13708645-13708645 FN3629-S SNP G -> A AC=2;AN=190;BQB=0.999409;DP=2560;DP4=1403,1026,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.04395e-18;MQSB=0.986155;RPB=0.306831;SGB=144.727;VDB=0.676842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.5:13714302 chr05:013714302 0 W/13714302-13714302 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.856892;DP=4926;DP4=2081,2644,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17751e-12;MQSB=0.999865;RPB=0.999813;SGB=91.1059;VDB=0.910579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3669-S.SNP.5:13733862 chr05:013733862 0 W/13733862-13733862 FN3669-S SNP A -> G AC=2;AN=190;BQB=0.999845;DP=2822;DP4=1433,1299,5,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.81733e-10;MQSB=0.933083;RPB=0.665078;SGB=50.3161;VDB=0.402928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.5:13737048 chr05:013737048 0 W/13737048-13737048 FN2788-S SNP G -> C AC=1;AN=198;BQB=0.654766;DP=4112;DP4=1767,2134,3,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.35191e-12;MQSB=0.945378;RPB=0.766207;SGB=58.1246;VDB=0.802467;EFF=INTRON(MODIFIER||||847|LOC_Os05g23880|protein_coding|CODING|LOC_Os05g23880.1|5|1) FN1401-S.SNP.5:13737455 chr05:013737455 0 W/13737455-13737455 FN1401-S Single Base Substitution T-C INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3342-S.SNP.5:13742346 chr05:013742346 0 W/13742346-13742346 FN3342-S SNP C -> G AC=1;AN=184;BQB=0.904901;DP=2936;DP4=1439,1370,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75261e-08;MQSB=0.310286;RPB=0.843423;SGB=42.7914;VDB=0.635451;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V537|605|LOC_Os05g23890|protein_coding|CODING|LOC_Os05g23890.1|3|1) FN3057-S.SNP.5:13747487 chr05:013747487 0 W/13747487-13747487 FN3057-S SNP T -> C AC=1;AN=184;BQB=0.251855;DP=1656;DP4=1172,432,7,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0156152;MQSB=0.88177;RPB=0.764914;SGB=18.1394;VDB=0.905336;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.5:13751945 chr05:013751945 0 W/13751945-13751945 FN1546-S Single Base Substitution C-T INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN539-S.SNP.5:13752886 chr05:013752886 0 W/13752886-13752886 FN539-S Single Base Substitution C-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2664-S.SNP.5:13764463 chr05:013764463 0 W/13764463-13764463 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.75096;DP=5248;DP4=2481,2546,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000190549;MQB=2.6238e-08;MQSB=0.966943;RPB=0.63325;SGB=54.6902;VDB=0.886472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.5:13765444 chr05:013765444 0 W/13765444-13765444 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.000984497;DP=2908;DP4=1034,1500,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000343879;MQB=1.86542e-07;MQSB=0.50261;RPB=3.81235e-05;SGB=-410.266;VDB=0.336857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.5:13766497 chr05:013766497 0 W/13766497-13766497 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.999812;DP=5104;DP4=2407,2444,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.55596e-13;MQSB=0.740638;RPB=0.840177;SGB=42.5108;VDB=0.0718333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.5:13768066 chr05:013768066 0 W/13768066-13768066 FN2222-S SNP A -> G AC=1;AN=190;BQB=0.329165;DP=5344;DP4=2542,2493,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000187126;MQB=6.22788e-09;MQSB=0.998389;RPB=0.813542;SGB=58.2031;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.5:13782256 chr05:013782256 0 W/13782256-13782256 FN735-S Single Base Substitution C-A INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN3774-S.SNP.5:13786045 chr05:013786045 0 W/13786045-13786045 FN3774-S SNP C -> T AC=1;AN=190;BQB=0.943496;DP=2621;DP4=1149,1177,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00572301;MQB=0.000228569;MQSB=0.469261;RPB=0.0939794;SGB=28.9929;VDB=0.563266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.5:13795372 chr05:013795372 0 W/13795372-13795372 FN1440-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g23960 pentatricopeptide, putative, expressed SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN_935-1.SNP.5:13797004 chr05:013797004 0 W/13797004-13797004 FN_935-1 Single Base Substitution T-C Homo LOC_Os05g23960 pentatricopeptide, putative, expressed SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN-384.SNP.5:13800507 chr05:013800507 0 W/13800507-13800507 FN-384 Single Base Substitution G-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1263-S.SNP.5:13804115 chr05:013804115 0 W/13804115-13804115 FN1263-S Single Base Substitution A-G INTRON HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN-353.SNP.5:13808426 chr05:013808426 0 W/13808426-13808426 FN-353 Single Base Substitution C-T INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1547-S.SNP.5:13809362 chr05:013809362 0 W/13809362-13809362 FN1547-S Single Base Substitution C-T INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN3323-S.SNP.5:13818567 chr05:013818567 0 W/13818567-13818567 FN3323-S SNP A -> G AC=1;AN=184;BQB=0.980152;DP=2918;DP4=1360,1498,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.59966e-05;MQSB=0.999608;RPB=0.967426;SGB=30.6558;VDB=0.378188;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H175R|1153|LOC_Os05g23990|protein_coding|CODING|LOC_Os05g23990.1|2|1) W463-2-1.SNP.5:13819575 chr05:013819575 0 W/13819575-13819575 W463-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g23990 rp3 protein, putative, expressed SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN-22.SNP.5:13822687 chr05:013822687 0 W/13822687-13822687 FN-22 Single Base Substitution T-A INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3785-S.SNP.5:13831383 chr05:013831383 0 W/13831383-13831383 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.993386;DP=2470;DP4=1237,1162,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02993e-08;MQSB=0.927574;RPB=0.528893;SGB=36.1006;VDB=0.355085;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.5:13833012 chr05:013833012 0 W/13833012-13833012 FN-179 Single Base Substitution T-A INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2280-S.SNP.5:13843638 chr05:013843638 0 W/13843638-13843638 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.150822;DP=4668;DP4=2244,2088,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19279e-11;MQSB=0.822546;RPB=0.665075;SGB=-60.3192;VDB=0.555883;EFF=INTRON(MODIFIER||||439|LOC_Os05g24020|protein_coding|CODING|LOC_Os05g24020.1|11|1) W596-1-1.SNP.5:13847642 chr05:013847642 0 W/13847642-13847642 W596-1-1 Single Base Substitution T-A INTRON HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN3518-S.SNP.5:13850131 chr05:013850131 0 W/13850131-13850131 FN3518-S SNP T -> A AC=1;AN=188;BQB=0.954621;DP=3455;DP4=1678,1690,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.98715e-07;MQSB=0.991756;RPB=0.218277;SGB=28.8977;VDB=0.0429982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.5:13850590 chr05:013850590 0 W/13850590-13850590 FN2412 SNP C -> T AC=1;AN=200;BQB=0.881296;DP=5049;DP4=2234,2520,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43126e-08;MQSB=0.99471;RPB=0.958376;SGB=43.8747;VDB=0.674156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.5:13851288 chr05:013851288 0 W/13851288-13851288 FN1380-S Single Base Substitution A-G INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2084-S.SNP.5:13857679 chr05:013857679 0 W/13857679-13857679 FN2084-S SNP T -> A AC=2;AN=168;BQB=0.518398;DP=2619;DP4=1478,1079,15,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.01275e-13;MQSB=0.958106;RPB=0.957169;SGB=-79.0524;VDB=0.78718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q458L|872|LOC_Os05g24040|protein_coding|CODING|LOC_Os05g24040.1|2|1) FN1025-S.SNP.5:13858652 chr05:013858652 0 W/13858652-13858652 FN1025-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g24040 retrotransposon protein, putative, unclassified SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3426-S.SNP.5:13867050 chr05:013867050 0 W/13867050-13867050 FN3426-S SNP C -> T AC=2;AN=184;BQB=0.68418;DP=3383;DP4=1572,1676,21,19;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000886787;MQB=4.46341e-19;MQSB=0.703801;RPB=0.995223;SGB=-225.295;VDB=0.878767;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y51|914|LOC_Os05g24060|protein_coding|CODING|LOC_Os05g24060.1|1|1) FN-170.SNP.5:13868244 chr05:013868244 0 W/13868244-13868244 FN-170 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. W423-5-1.SNP.5:13872351 chr05:013872351 0 W/13872351-13872351 W423-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN1707-S.SNP.5:13873790 chr05:013873790 0 W/13873790-13873790 FN1707-S SNP A -> C AC=1;AN=188;BQB=0.189699;DP=2873;DP4=1221,1623,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00208841;MQB=1.11114e-06;MQSB=0.352506;RPB=0.568464;SGB=3.99491;VDB=0.0965088;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.5:13875954 chr05:013875954 0 W/13875954-13875954 FN904-S Single Base Substitution A-T INTRON HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2456.SNP.5:13876903 chr05:013876903 0 W/13876903-13876903 FN2456 SNP G -> A AC=1;AN=200;BQB=0.774208;DP=4735;DP4=2296,2227,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.52587e-08;MQSB=0.999178;RPB=0.208802;SGB=49.6594;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.5:13882594 chr05:013882594 0 W/13882594-13882594 FN1635-S SNP T -> G AC=1;AN=188;BQB=0.0321706;DP=3919;DP4=1960,1932,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.1205e-06;MQSB=0.999161;RPB=0.235678;SGB=-16.0863;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.5:13891447 chr05:013891447 0 W/13891447-13891447 FN2385 SNP A -> C AC=1;AN=192;BQB=0.94032;DP=4251;DP4=2181,1819,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.1513e-14;MQSB=0.563189;RPB=0.857282;SGB=82.5522;VDB=0.558122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.5:13892742 chr05:013892742 0 W/13892742-13892742 FN3740-S SNP G -> A AC=1;AN=190;BQB=0.683961;DP=2965;DP4=1315,1521,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.26982e-06;MQSB=0.960229;RPB=0.819484;SGB=39.6545;VDB=0.0871592;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.5:13893390 chr05:013893390 0 W/13893390-13893390 FN4132-S SNP C -> G AC=1;AN=182;BQB=0.730673;DP=2819;DP4=1157,1582,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.56602e-05;MQSB=0.982097;RPB=0.94262;SGB=28.6061;VDB=0.622324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.5:13901171 chr05:013901171 0 W/13901171-13901171 FN3846-S SNP G -> A AC=2;AN=190;BQB=0.972072;DP=2798;DP4=1338,1347,11,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00107219;MQB=7.63158e-11;MQSB=0.0250503;RPB=0.710118;SGB=94.6341;VDB=0.323957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.5:13901307 chr05:013901307 0 W/13901307-13901307 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.999327;DP=2948;DP4=1515,1354,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.15744e-08;MQSB=0.0848815;RPB=0.999837;SGB=62.6088;VDB=0.540901;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.5:13903545 chr05:013903545 0 W/13903545-13903545 FN3513-S SNP A -> G AC=2;AN=188;BQB=0.952505;DP=2591;DP4=1338,1143,6,6;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0652258;MQB=0.367742;MQSB=0.549379;RPB=0.844839;SGB=48.979;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.5:13905000 chr05:013905000 0 W/13905000-13905000 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.732993;DP=1366;DP4=670,624,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30877e-08;MQSB=0.974928;RPB=0.986762;SGB=56.6036;VDB=0.390914;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.5:13914334 chr05:013914334 0 W/13914334-13914334 FN-263 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g24120 retrotransposon protein, putative, unclassified, expressed SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3905-S.SNP.5:13915570 chr05:013915570 0 W/13915570-13915570 FN3905-S SNP G -> T AC=1;AN=158;BQB=0.935036;DP=2419;DP4=1057,1272,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.61596e-08;MQSB=0.75075;RPB=0.793177;SGB=37.4429;VDB=0.297415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D920Y|939|LOC_Os05g24120|protein_coding|CODING|LOC_Os05g24120.1|6|1) FN3448-S.SNP.5:13917507 chr05:013917507 0 W/13917507-13917507 FN3448-S SNP A -> T AC=2;AN=184;BQB=0.777162;DP=2919;DP4=1409,1369,13,12;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0;MQB=3.64617e-09;MQSB=0.2629;RPB=0.608099;SGB=78.0093;VDB=0.505958;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.5:13920627 chr05:013920627 0 W/13920627-13920627 FN620-S Single Base Substitution G-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1709-S.SNP.5:13920851 chr05:013920851 0 W/13920851-13920851 FN1709-S SNP T -> A AC=1;AN=188;BQB=0.0648024;DP=4166;DP4=1966,2150,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.66992e-13;MQSB=0.929583;RPB=0.990468;SGB=-79.383;VDB=0.488971;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.5:13929637 chr05:013929637 0 W/13929637-13929637 FN3760-S SNP C -> A AC=1;AN=190;BQB=0.623146;DP=2869;DP4=1566,1224,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000139025;MQSB=0.897322;RPB=0.999972;SGB=25.439;VDB=0.755657;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V692|767|LOC_Os05g24150|protein_coding|CODING|LOC_Os05g24150.1|4|1) FN2489.SNP.5:13929957 chr05:013929957 0 W/13929957-13929957 FN2489 SNP T -> A AC=2;AN=200;BQB=0.743654;DP=5138;DP4=2303,2510,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.43869e-29;MQSB=0.945568;RPB=0.690055;SGB=180.871;VDB=0.211469;EFF=INTRON(MODIFIER||||767|LOC_Os05g24150|protein_coding|CODING|LOC_Os05g24150.1|2|1) FN3385-S.SNP.5:13932120 chr05:013932120 0 W/13932120-13932120 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.974295;DP=3482;DP4=1815,1568,9,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32952e-07;MQSB=0.998537;RPB=0.642605;SGB=28.7043;VDB=0.0401475;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T195M|767|LOC_Os05g24150|protein_coding|CODING|LOC_Os05g24150.1|1|1) FN3385-S.SNP.5:13932122 chr05:013932122 0 W/13932122-13932122 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.953315;DP=3492;DP4=1845,1578,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.45897e-06;MQSB=0.996168;RPB=0.979516;SGB=35.1773;VDB=0.047706;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I194|767|LOC_Os05g24150|protein_coding|CODING|LOC_Os05g24150.1|1|1) FN1076-S.SNP.5:13933874 chr05:013933874 0 W/13933874-13933874 FN1076-S Single Base Substitution A-G INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN1413-S.SNP.5:13937124 chr05:013937124 0 W/13937124-13937124 FN1413-S Single Base Substitution T-G INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-178.SNP.5:13943547 chr05:013943547 0 W/13943547-13943547 FN-178 Single Base Substitution T-A INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN989-S.SNP.5:13951032 chr05:013951032 0 W/13951032-13951032 FN989-S Single Base Substitution A-T INTRON HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3781-S.SNP.5:13951255 chr05:013951255 0 W/13951255-13951255 FN3781-S SNP C -> T AC=1;AN=190;BQB=0.18685;DP=2782;DP4=1360,1306,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0150971;MQB=0.395393;MQSB=0.533898;RPB=0.547131;SGB=80.9724;VDB=0.559054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G1031S|1228|LOC_Os05g24170|protein_coding|CODING|LOC_Os05g24170.1|7|1) FN4032-S.SNP.5:13954872 chr05:013954872 0 W/13954872-13954872 FN4032-S SNP C -> T AC=1;AN=166;BQB=0.501088;DP=2437;DP4=1201,1145,8,4;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0.000410341;MQB=2.68038e-06;MQSB=0.909964;RPB=0.903814;SGB=14.8923;VDB=0.903477;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K249|1228|LOC_Os05g24170|protein_coding|CODING|LOC_Os05g24170.1|3|1) FN4149-S.SNP.5:13963083 chr05:013963083 0 W/13963083-13963083 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.679557;DP=2354;DP4=1148,1134,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000144625;MQSB=0.982339;RPB=0.916412;SGB=24.5502;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN3507-S.SNP.5:13965791 chr05:013965791 0 W/13965791-13965791 FN3507-S SNP T -> A AC=1;AN=188;BQB=0.989333;DP=2442;DP4=1036,1249,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.76554e-12;MQSB=0.946048;RPB=0.872773;SGB=36.2493;VDB=0.493173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3507-S.SNP.5:13965794 chr05:013965794 0 W/13965794-13965794 FN3507-S SNP T -> C AC=1;AN=188;BQB=0.804186;DP=2431;DP4=1050,1278,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.28767e-12;MQSB=0.989016;RPB=0.826025;SGB=76.2387;VDB=0.465772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.5:13966291 chr05:013966291 0 W/13966291-13966291 FN1708-S SNP G -> A AC=1;AN=188;BQB=0.0012401;DP=3077;DP4=1628,1413,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000189904;MQSB=0.999767;RPB=0.37712;SGB=-107.522;VDB=0.282371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.5:13966379 chr05:013966379 0 W/13966379-13966379 FN2753-S SNP A -> G AC=2;AN=200;BQB=0.0930592;DP=4847;DP4=2185,2297,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14852e-20;MQSB=0.955054;RPB=0.950725;SGB=0.808681;VDB=0.78413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.5:13969411 chr05:013969411 0 W/13969411-13969411 FN3486-S SNP C -> A AC=1;AN=184;BQB=0.864749;DP=3663;DP4=1356,2204,4,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.45481e-14;MQSB=0.970313;RPB=0.646209;SGB=40.9276;VDB=0.948034;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.5:13984440 chr05:013984440 0 W/13984440-13984440 FN1006-S Single Base Substitution C-T INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1505-S.SNP.5:13987206 chr05:013987206 0 W/13987206-13987206 FN1505-S Single Base Substitution C-T INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN692-S.SNP.5:13998357 chr05:013998357 0 W/13998357-13998357 FN692-S Single Base Substitution G-A INTRON HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2309.SNP.5:14000117 chr05:014000117 0 W/14000117-14000117 FN2309 SNP A -> T AC=2;AN=192;BQB=0.935787;DP=4734;DP4=1887,2157,18,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.18749e-13;MQSB=0.936591;RPB=0.855708;SGB=-80.293;VDB=0.0863032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E705V|1128|LOC_Os05g24200|protein_coding|CODING|LOC_Os05g24200.1|5|1) FN2197-S.SNP.5:14000827 chr05:014000827 0 W/14000827-14000827 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.813631;DP=7569;DP4=3586,3597,20,7;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.178623;MQB=0.97781;MQSB=7.96393e-30;RPB=0.993958;SGB=54.3062;VDB=0.0735723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H942Y|1128|LOC_Os05g24200|protein_coding|CODING|LOC_Os05g24200.1|5|1) FN-199.SNP.5:14004213 chr05:014004213 0 W/14004213-14004213 FN-199 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g24210 expressed protein SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3826-S.SNP.5:14004492 chr05:014004492 0 W/14004492-14004492 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.993568;DP=2811;DP4=1209,1527,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51936e-09;MQSB=0.909259;RPB=0.681268;SGB=67.3108;VDB=0.60798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R127W|135|LOC_Os05g24210|protein_coding|CODING|LOC_Os05g24210.1|1|1) FN3838-S.SNP.5:14006472 chr05:014006472 0 W/14006472-14006472 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.730868;DP=2353;DP4=1021,1263,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.79095e-07;MQSB=0.917732;RPB=0.976173;SGB=39.9877;VDB=0.218005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.5:14009853 chr05:014009853 0 W/14009853-14009853 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2271-S.SNP.5:14013242 chr05:014013242 0 W/14013242-14013242 FN2271-S SNP G -> T AC=1;AN=190;BQB=0.30921;DP=4281;DP4=1978,1996,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.3392e-06;MQSB=0.501337;RPB=0.829384;SGB=21.1058;VDB=0.194617;EFF=INTRON(MODIFIER||||84|LOC_Os05g24230|protein_coding|CODING|LOC_Os05g24230.1|2|1) FN1215-S.SNP.5:14015578 chr05:014015578 0 W/14015578-14015578 FN1215-S Single Base Substitution C-A INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. 701-3.SNP.5:14016462 chr05:014016462 0 W/14016462-14016462 701-3 Single Base Substitution T-G INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN373-S.SNP.5:14017108 chr05:014017108 0 W/14017108-14017108 FN373-S Single Base Substitution C-T INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2630-S.SNP.5:14023639 chr05:014023639 0 W/14023639-14023639 FN2630-S SNP T -> A AC=2;AN=200;BQB=0.289468;DP=4942;DP4=2500,2170,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.67428e-26;MQSB=0.983982;RPB=0.766424;SGB=197.025;VDB=0.511823;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.5:14025347 chr05:014025347 0 W/14025347-14025347 FN4279-S SNP C -> A AC=1;AN=170;BQB=0.731958;DP=2579;DP4=1271,1214,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04612e-08;MQSB=0.949336;RPB=0.941134;SGB=52.3148;VDB=0.428843;EFF=INTRON(MODIFIER||||473|LOC_Os05g24250|protein_coding|CODING|LOC_Os05g24250.1|6|1) FN2795-S.SNP.5:14025559 chr05:014025559 0 W/14025559-14025559 FN2795-S SNP A -> T AC=2;AN=198;BQB=0.974333;DP=3954;DP4=1810,1908,20,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.48315e-22;MQSB=0.886464;RPB=0.959226;SGB=155.237;VDB=0.716772;EFF=INTRON(MODIFIER||||473|LOC_Os05g24250|protein_coding|CODING|LOC_Os05g24250.1|6|1) FN2795-S.SNP.5:14025560 chr05:014025560 0 W/14025560-14025560 FN2795-S SNP G -> T AC=2;AN=198;BQB=0.999871;DP=3948;DP4=1794,1922,22,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.15171e-24;MQSB=0.836678;RPB=0.966605;SGB=133.622;VDB=0.677739;EFF=INTRON(MODIFIER||||473|LOC_Os05g24250|protein_coding|CODING|LOC_Os05g24250.1|6|1) FN951-S.SNP.5:14029818 chr05:014029818 0 W/14029818-14029818 FN951-S Single Base Substitution T-C INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN1625-S.SNP.5:14030327 chr05:014030327 0 W/14030327-14030327 FN1625-S Single Base Substitution C-G INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN771-S.SNP.5:14037384 chr05:014037384 0 W/14037384-14037384 FN771-S Single Base Substitution A-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1719-S.SNP.5:14040072 chr05:014040072 0 W/14040072-14040072 FN1719-S SNP A -> G AC=2;AN=188;BQB=0.177023;DP=3076;DP4=1523,1494,31,17;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=4.86984e-10;MQSB=0.00125157;RPB=0.752566;SGB=-103.27;VDB=0.752568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.5:14041055 chr05:014041055 0 W/14041055-14041055 FN2279-S SNP T -> A AC=2;AN=190;BQB=0.99188;DP=5074;DP4=2412,2266,35,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.89356e-35;MQSB=0.962997;RPB=0.795768;SGB=231.564;VDB=0.023414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:14045367 chr05:014045367 0 W/14045367-14045367 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.994303;DP=4622;DP4=2440,1892,6,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.49632e-05;MQSB=0.997159;RPB=0.79014;SGB=15.0344;VDB=0.140844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN1184-S Single Base Substitution A-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1392-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN1392-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1570-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN1570-S Single Base Substitution A-G INTERGENIC Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2218-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN2218-S SNP A -> G AC=2;AN=190;BQB=0.755896;DP=4854;DP4=1983,2383,31,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.76584e-29;MQSB=0.928373;RPB=0.988161;SGB=141.138;VDB=0.569456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN2602-S SNP A -> G AC=2;AN=198;BQB=0.990214;DP=4109;DP4=1900,1956,14,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.75748e-16;MQSB=0.672791;RPB=0.222749;SGB=63.0809;VDB=0.537107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN3651-S SNP A -> G AC=2;AN=190;BQB=0.999993;DP=2343;DP4=1197,1047,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.07759e-14;MQSB=0.840324;RPB=0.576153;SGB=94.6341;VDB=0.0392372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN3837-S SNP A -> G AC=1;AN=190;BQB=0.72479;DP=2282;DP4=1162,1045,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6236e-05;MQSB=0.853899;RPB=0.999904;SGB=39.9877;VDB=0.769036;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN518-S Single Base Substitution A-G INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN543-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN543-S Single Base Substitution A-G INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN691-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN691-S Single Base Substitution A-G INTERGENIC HOMO SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN990-S.SNP.5:14050171 chr05:014050171 0 W/14050171-14050171 FN990-S Single Base Substitution A-G INTERGENIC HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2742-S.SNP.5:14051770 chr05:014051770 0 W/14051770-14051770 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.224438;DP=5317;DP4=2656,2409,16,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.92765e-06;MQSB=0.852354;RPB=0.619;SGB=104.921;VDB=0.687024;EFF=INTRON(MODIFIER||||913|LOC_Os05g24290|protein_coding|CODING|LOC_Os05g24290.1|3|1) FN-374.SNP.5:14056109 chr05:014056109 0 W/14056109-14056109 FN-374 Single Base Substitution G-A INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2310.SNP.5:14058897 chr05:014058897 0 W/14058897-14058897 FN2310 SNP C -> T AC=2;AN=192;BQB=0.0443657;DP=4074;DP4=2106,1629,23,16;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.44858e-11;MQSB=0.871483;RPB=0.873846;SGB=85.3296;VDB=0.157513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.5:14061090 chr05:014061090 0 W/14061090-14061090 FN2412 SNP C -> T AC=1;AN=200;BQB=0.99507;DP=4307;DP4=2044,2001,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21214e-09;MQSB=0.994727;RPB=0.933588;SGB=86.5007;VDB=0.854934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.5:14062997 chr05:014062997 0 W/14062997-14062997 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.999459;DP=4504;DP4=2097,2124,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.08346e-13;MQSB=0.128046;RPB=0.999947;SGB=95.7111;VDB=0.178918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P176S|214|LOC_Os05g24300|protein_coding|CODING|LOC_Os05g24300.1|2|1) FN2784-S.SNP.5:14063466 chr05:014063466 0 W/14063466-14063466 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.999781;DP=3605;DP4=1634,1768,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000554785;MQB=2.17278e-10;MQSB=0.737344;RPB=0.525522;SGB=104.69;VDB=0.221688;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.5:14065525 chr05:014065525 0 W/14065525-14065525 FN996-S Single Base Substitution T-G STOP_GAINED HET LOC_Os05g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN276-S.SNP.5:14066268 chr05:014066268 0 W/14066268-14066268 FN276-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1383-S.SNP.5:14067798 chr05:014067798 0 W/14067798-14067798 FN1383-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN355-S.SNP.5:14067798 chr05:014067798 0 W/14067798-14067798 FN355-S Single Base Substitution G-A INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN-296.SNP.5:14069197 chr05:014069197 0 W/14069197-14069197 FN-296 Single Base Substitution G-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-296.SNP.5:14069198 chr05:014069198 0 W/14069198-14069198 FN-296 Single Base Substitution T-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN3382-S.SNP.5:14077894 chr05:014077894 0 W/14077894-14077894 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.96138;DP=2921;DP4=1388,1447,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.71481e-07;MQSB=0.996073;RPB=0.883388;SGB=48.7425;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.5:14082507 chr05:014082507 0 W/14082507-14082507 FN3803-S SNP T -> C AC=1;AN=190;BQB=0.756982;DP=2582;DP4=1052,1352,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.3757e-09;MQSB=0.0960311;RPB=0.389584;SGB=36.4291;VDB=0.183457;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.5:14085214 chr05:014085214 0 W/14085214-14085214 FN479-S Single Base Substitution C-T INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-138.SNP.5:14085463 chr05:014085463 0 W/14085463-14085463 FN-138 Single Base Substitution G-A INTERGENIC HOMO SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN1528-S.SNP.5:14087701 chr05:014087701 0 W/14087701-14087701 FN1528-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g24360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3851-S.SNP.5:14088735 chr05:014088735 0 W/14088735-14088735 FN3851-S SNP G -> A AC=2;AN=158;BQB=0.985506;DP=2788;DP4=1461,1212,12,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.51082e-17;MQSB=0.979253;RPB=0.99995;SGB=84.6152;VDB=0.410068;EFF=INTRON(MODIFIER||||280|LOC_Os05g24360|protein_coding|CODING|LOC_Os05g24360.1|1|1) FN-108.SNP.5:14089159 chr05:014089159 0 W/14089159-14089159 FN-108 Single Base Substitution C-T INTRON HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3347-S.SNP.5:14100625 chr05:014100625 0 W/14100625-14100625 FN3347-S SNP A -> G AC=1;AN=184;BQB=0.815891;DP=3379;DP4=1365,1854,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.275525;MQB=0.211637;MQSB=0;RPB=0.486583;SGB=98.4821;VDB=0.93172;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.5:14100901 chr05:014100901 0 W/14100901-14100901 FN-285 Single Base Substitution C-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN4072-S.SNP.5:14101395 chr05:014101395 0 W/14101395-14101395 FN4072-S SNP C -> A AC=1;AN=182;BQB=0.889781;DP=2446;DP4=1158,1169,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.4097e-05;MQSB=0.860503;RPB=0.747749;SGB=30.5793;VDB=0.433664;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.5:14104797 chr05:014104797 0 W/14104797-14104797 FN4108-S SNP G -> A AC=2;AN=182;BQB=0.257008;DP=3011;DP4=1331,1584,10,15;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=8.25201e-09;MQSB=0.618032;RPB=0.448686;SGB=107.263;VDB=0.0636074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.5:14106140 chr05:014106140 0 W/14106140-14106140 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.986082;DP=3450;DP4=1591,1795,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.9583e-07;MQSB=0.999597;RPB=0.168024;SGB=48.979;VDB=0.126318;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.5:14106399 chr05:014106399 0 W/14106399-14106399 FN4095-S SNP T -> A AC=2;AN=182;BQB=0.596619;DP=3202;DP4=1572,1477,15,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.43665e-14;MQSB=0.999784;RPB=0.583861;SGB=55.7853;VDB=0.8979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q88L|144|LOC_Os05g24420|protein_coding|CODING|LOC_Os05g24420.1|1|1) FN2484.SNP.5:14112797 chr05:014112797 0 W/14112797-14112797 FN2484 SNP C -> T AC=1;AN=200;BQB=0.49566;DP=4223;DP4=2059,1929,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63738e-13;MQSB=0.98663;RPB=0.0898791;SGB=76.3213;VDB=0.415818;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.5:14114745 chr05:014114745 0 W/14114745-14114745 FN4010-S SNP G -> A AC=2;AN=168;BQB=0.46682;DP=2537;DP4=1099,1307,11,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20294e-15;MQSB=0.960078;RPB=0.811431;SGB=25.6529;VDB=0.263988;EFF=INTRON(MODIFIER||||176|LOC_Os05g24440|protein_coding|CODING|LOC_Os05g24440.1|1|1) FN3375-S.SNP.5:14120674 chr05:014120674 0 W/14120674-14120674 FN3375-S SNP C -> T AC=1;AN=184;BQB=0.925181;DP=3592;DP4=1624,1880,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0180958;MQB=7.44108e-05;MQSB=0.142167;RPB=0.976162;SGB=49.835;VDB=0.996246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R844C|1968|LOC_Os05g24460|protein_coding|CODING|LOC_Os05g24460.1|2|1) FN2791-S.SNP.5:14125802 chr05:014125802 0 W/14125802-14125802 FN2791-S SNP G -> A AC=1;AN=186;BQB=0.801995;DP=3475;DP4=1670,1584,8,9;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.00258993;MQB=1.25904e-07;MQSB=0.695338;RPB=0.679061;SGB=72.5245;VDB=0.165509;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R742|1054|LOC_Os05g24470|protein_coding|CODING|LOC_Os05g24470.1|2|1) FN2611-S.SNP.5:14128691 chr05:014128691 0 W/14128691-14128691 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.0888684;DP=3551;DP4=1058,2264,13,27;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00309772;MQB=4.12463e-05;MQSB=1.4196e-21;RPB=0.935047;SGB=134.004;VDB=0.20284;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.5:14129105 chr05:014129105 0 W/14129105-14129105 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3400-S.SNP.5:14133500 chr05:014133500 0 W/14133500-14133500 FN3400-S SNP C -> A AC=2;AN=184;BQB=0.729418;DP=2880;DP4=1557,1113,15,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.18931e-10;MQSB=0.996454;RPB=0.9977;SGB=70.9657;VDB=0.692143;EFF=INTERGENIC(MODIFIER||||||||||1) FN-5.SNP.5:14136993 chr05:014136993 0 W/14136993-14136993 FN-5 Single Base Substitution A-G INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN-333.SNP.5:14139309 chr05:014139309 0 W/14139309-14139309 FN-333 Single Base Substitution A-G INTERGENIC HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN997-S.SNP.5:14144355 chr05:014144355 0 W/14144355-14144355 FN997-S Single Base Substitution A-T INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3450-S.SNP.5:14146363 chr05:014146363 0 W/14146363-14146363 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.869213;DP=3356;DP4=1348,1917,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20567e-06;MQSB=0.614731;RPB=0.403687;SGB=39.2697;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.5:14146555 chr05:014146555 0 W/14146555-14146555 FN-173 Single Base Substitution G-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2498.SNP.5:14147920 chr05:014147920 0 W/14147920-14147920 FN2498 SNP G -> A AC=1;AN=200;BQB=0.0840156;DP=4892;DP4=2222,2213,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204415;MQB=2.13288e-08;MQSB=0.87108;RPB=0.735812;SGB=36.6644;VDB=0.397552;EFF=INTRON(MODIFIER||||498|LOC_Os05g24520|protein_coding|CODING|LOC_Os05g24520.1|1|1) FN2320.SNP.5:14160936 chr05:014160936 0 W/14160936-14160936 FN2320 SNP G -> T AC=1;AN=192;BQB=0.662628;DP=4614;DP4=2282,2020,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.78394e-10;MQSB=0.595738;RPB=0.87823;SGB=10.4835;VDB=0.409481;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.5:14169283 chr05:014169283 0 W/14169283-14169283 FN718-S Single Base Substitution A-G INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1561-S.SNP.5:14170159 chr05:014170159 0 W/14170159-14170159 FN1561-S Single Base Substitution G-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1228-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN1228-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1740-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN1740-S SNP G -> A AC=2;AN=188;BQB=0.980231;DP=1008;DP4=543,414,7,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.74211e-08;MQSB=0.858194;RPB=0.680108;SGB=53.5223;VDB=0.327707;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L118|223|LOC_Os05g24570|protein_coding|CODING|LOC_Os05g24570.1|2|1) FN2265-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.894666;DP=3325;DP4=1341,1552,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81745e-11;MQSB=0.837921;RPB=0.589983;SGB=94.6341;VDB=0.471712;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L118|223|LOC_Os05g24570|protein_coding|CODING|LOC_Os05g24570.1|2|1) FN2475.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN2475 SNP G -> A AC=1;AN=200;BQB=0.981852;DP=3931;DP4=1539,2030,18,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.6299e-11;MQSB=0.992537;RPB=0.685846;SGB=79.9264;VDB=0.0757941;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L118|223|LOC_Os05g24570|protein_coding|CODING|LOC_Os05g24570.1|2|1) FN3360-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN3360-S SNP G -> A AC=2;AN=184;BQB=0.550497;DP=3710;DP4=1474,2082,15,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.0891e-16;MQSB=0.952354;RPB=0.999763;SGB=166.309;VDB=0.320457;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L118|223|LOC_Os05g24570|protein_coding|CODING|LOC_Os05g24570.1|2|1) FN3567-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN3567-S SNP G -> A AC=2;AN=188;BQB=0.301082;DP=4098;DP4=1523,2419,26,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.33265e-25;MQSB=0.502559;RPB=0.852693;SGB=262.514;VDB=0.996643;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L118|223|LOC_Os05g24570|protein_coding|CODING|LOC_Os05g24570.1|2|1) FN507-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN507-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN779-S.SNP.5:14171272 chr05:014171272 0 W/14171272-14171272 FN779-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1351-S.SNP.5:14176425 chr05:014176425 0 W/14176425-14176425 FN1351-S Single Base Substitution G-A INTRON HOMO SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3729-S.SNP.5:14180433 chr05:014180433 0 W/14180433-14180433 FN3729-S SNP G -> T AC=2;AN=190;BQB=0.647406;DP=2489;DP4=1149,1214,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27624e-12;MQSB=0.78164;RPB=0.634673;SGB=89.4087;VDB=0.767118;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.5:14188232 chr05:014188232 0 W/14188232-14188232 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN318-S.SNP.5:14188232 chr05:014188232 0 W/14188232-14188232 FN318-S Single Base Substitution C-T INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2166-S.SNP.5:14194641 chr05:014194641 0 W/14194641-14194641 FN2166-S SNP C -> A AC=1;AN=168;BQB=0.142162;DP=4353;DP4=2060,2240,14,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.79572e-10;MQSB=0.936764;RPB=0.98188;SGB=-155.04;VDB=0.316565;EFF=INTRON(MODIFIER||||523|LOC_Os05g24601|protein_coding|CODING|LOC_Os05g24601.1|6|1),INTRON(MODIFIER||||500|LOC_Os05g24601|protein_coding|CODING|LOC_Os05g24601.2|5|1),INTRON(MODIFIER||||451|LOC_Os05g24601|protein_coding|CODING|LOC_Os05g24601.3|5|1) FN369-S.SNP.5:14200338 chr05:014200338 0 W/14200338-14200338 FN369-S Single Base Substitution T-G INTRON HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN1533-S.SNP.5:14201319 chr05:014201319 0 W/14201319-14201319 FN1533-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN918-S.SNP.5:14204763 chr05:014204763 0 W/14204763-14204763 FN918-S Single Base Substitution A-T INTRON HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3798-S.SNP.5:14210622 chr05:014210622 0 W/14210622-14210622 FN3798-S SNP A -> G AC=2;AN=190;BQB=0.889887;DP=2627;DP4=1525,1003,19,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.51606e-16;MQSB=0.898363;RPB=0.865465;SGB=112.85;VDB=0.542624;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.5:14218937 chr05:014218937 0 W/14218937-14218937 FN-256 Single Base Substitution T-G INTRON HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2096-S.SNP.5:14230216 chr05:014230216 0 W/14230216-14230216 FN2096-S SNP T -> G AC=1;AN=168;BQB=0.225553;DP=3288;DP4=2150,1102,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76263e-08;MQSB=0.979894;RPB=0.796558;SGB=17.068;VDB=0.776051;EFF=INTERGENIC(MODIFIER||||||||||1) FN3576-S.SNP.5:14230323 chr05:014230323 0 W/14230323-14230323 FN3576-S SNP G -> T AC=2;AN=188;BQB=0.620063;DP=2969;DP4=1466,1413,22,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.85249e-20;MQSB=0.998642;RPB=0.366522;SGB=41.034;VDB=0.467247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.5:14233089 chr05:014233089 0 W/14233089-14233089 FN1763-S SNP G -> T AC=2;AN=188;BQB=0.999998;DP=2485;DP4=1106,1310,16,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.32693e-15;MQSB=0.942356;RPB=0.718236;SGB=-82.2964;VDB=0.0103337;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.5:14236600 chr05:014236600 0 W/14236600-14236600 FN4098-S SNP A -> G AC=1;AN=182;BQB=0.908303;DP=2591;DP4=1290,1222,4,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.34595e-09;MQSB=0.73655;RPB=0.985266;SGB=71.1765;VDB=0.518003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.5:14245994 chr05:014245994 0 W/14245994-14245994 FN1022-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2653-S.SNP.5:14250212 chr05:014250212 0 W/14250212-14250212 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.342524;DP=2740;DP4=1119,1352,4,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000364963;MQB=8.80286e-05;MQSB=0.472106;RPB=0.708089;SGB=54.2646;VDB=0.457171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.5:14258169 chr05:014258169 0 W/14258169-14258169 FN2449 SNP G -> A AC=2;AN=200;BQB=0.76967;DP=4061;DP4=1928,1918,10,11;HOB=0.0198;ICB=0.495051;MQ=22;MQ0F=0.138143;MQB=0.610788;MQSB=0;RPB=0.19279;SGB=91.1059;VDB=0.162032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.5:14260246 chr05:014260246 0 W/14260246-14260246 FN1113-S Single Base Substitution A-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2725-S.SNP.5:14260461 chr05:014260461 0 W/14260461-14260461 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.640625;DP=4483;DP4=2169,2089,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07073e-09;MQSB=0.978565;RPB=0.991015;SGB=21.6694;VDB=0.586299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.5:14261865 chr05:014261865 0 W/14261865-14261865 FN2475 SNP G -> A AC=1;AN=200;BQB=0.999966;DP=4397;DP4=1724,2357,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000227428;MQB=3.33364e-09;MQSB=0.935945;RPB=0.960252;SGB=72.6852;VDB=0.306219;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I215|341|LOC_Os05g24660|protein_coding|CODING|LOC_Os05g24660.1|1|1) FN389-S.SNP.5:14264899 chr05:014264899 0 W/14264899-14264899 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2476.SNP.5:14265611 chr05:014265611 0 W/14265611-14265611 FN2476 SNP G -> A AC=1;AN=200;BQB=0.865973;DP=4417;DP4=2171,1942,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04659e-06;MQSB=0.899114;RPB=0.949291;SGB=49.6594;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.5:14267529 chr05:014267529 0 W/14267529-14267529 FN442-S Single Base Substitution T-C INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN2790-S.SNP.5:14268821 chr05:014268821 0 W/14268821-14268821 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.942294;DP=2867;DP4=1234,1193,2,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.0450423;MQSB=0.934794;RPB=0.999904;SGB=18.5788;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.5:14270425 chr05:014270425 0 W/14270425-14270425 FN785-S Single Base Substitution C-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN888-S.SNP.5:14272976 chr05:014272976 0 W/14272976-14272976 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3763-S.SNP.5:14273795 chr05:014273795 0 W/14273795-14273795 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.579344;DP=2722;DP4=1420,1224,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.85306e-05;MQSB=0.98363;RPB=0.46231;SGB=36.1006;VDB=0.818196;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D185N|216|LOC_Os05g24670|protein_coding|CODING|LOC_Os05g24670.1|3|1) FN1476-S.SNP.5:14275937 chr05:014275937 0 W/14275937-14275937 FN1476-S Single Base Substitution G-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3709-S.SNP.5:14276692 chr05:014276692 0 W/14276692-14276692 FN3709-S SNP A -> T AC=1;AN=190;BQB=0.873528;DP=2786;DP4=1299,1372,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.5936e-06;MQSB=0.00433966;RPB=0.436803;SGB=53.6492;VDB=0.246834;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.5:14287249 chr05:014287249 0 W/14287249-14287249 FN3857-S SNP G -> A AC=1;AN=158;BQB=0.92659;DP=2843;DP4=1355,1371,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0186423;MQB=4.30075e-05;MQSB=0.0626147;RPB=0.262603;SGB=23.8187;VDB=0.522578;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R649C|1887|LOC_Os05g24680|protein_coding|CODING|LOC_Os05g24680.1|5|1) FN3957-S.SNP.5:14288320 chr05:014288320 0 W/14288320-14288320 FN3957-S SNP T -> A AC=1;AN=168;BQB=0.500842;DP=3395;DP4=1595,1561,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0182621;MQB=0.0739013;MQSB=1.38774e-07;RPB=0.787929;SGB=17.3231;VDB=0.960879;EFF=INTRON(MODIFIER||||1887|LOC_Os05g24680|protein_coding|CODING|LOC_Os05g24680.1|4|1) FN2194-S.SNP.5:14289072 chr05:014289072 0 W/14289072-14289072 FN2194-S SNP A -> C AC=1;AN=190;BQB=0.865687;DP=8940;DP4=5545,2875,27,12;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0434004;MQB=0.745064;MQSB=0;RPB=0.884021;SGB=-45.693;VDB=0.526966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L177W|1887|LOC_Os05g24680|protein_coding|CODING|LOC_Os05g24680.1|4|1) FN695-S.SNP.5:14289248 chr05:014289248 0 W/14289248-14289248 FN695-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN244-S.SNP.5:14292249 chr05:014292249 0 W/14292249-14292249 FN244-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4184-S.SNP.5:14294706 chr05:014294706 0 W/14294706-14294706 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.386881;DP=2629;DP4=1193,1313,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.19967e-05;MQSB=0.999548;RPB=0.136986;SGB=-2.88077;VDB=0.0426332;EFF=UTR_3_PRIME(MODIFIER||561||1307|LOC_Os05g24684|protein_coding|CODING|LOC_Os05g24684.1|12|1) FN2687-S.SNP.5:14297594 chr05:014297594 0 W/14297594-14297594 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.897222;DP=5149;DP4=2403,2471,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30284e-07;MQSB=0.728917;RPB=0.559596;SGB=13.8539;VDB=0.835732;EFF=INTRON(MODIFIER||||1307|LOC_Os05g24684|protein_coding|CODING|LOC_Os05g24684.1|11|1) FN414-S.SNP.5:14298692 chr05:014298692 0 W/14298692-14298692 FN414-S Single Base Substitution A-T INTRON HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN2686-S.SNP.5:14299450 chr05:014299450 0 W/14299450-14299450 FN2686-S SNP T -> C AC=1;AN=200;BQB=0.575641;DP=4984;DP4=2809,1971,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04933e-08;MQSB=0.978321;RPB=0.767951;SGB=24.2746;VDB=0.997055;EFF=INTRON(MODIFIER||||1307|LOC_Os05g24684|protein_coding|CODING|LOC_Os05g24684.1|10|1) FN2388.SNP.5:14300374 chr05:014300374 0 W/14300374-14300374 FN2388 SNP G -> A AC=1;AN=200;BQB=0.632219;DP=4709;DP4=2150,2183,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.02415e-15;MQSB=0.579736;RPB=0.998761;SGB=76.3213;VDB=0.548121;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A684|1307|LOC_Os05g24684|protein_coding|CODING|LOC_Os05g24684.1|10|1) FN3390-S.SNP.5:14310790 chr05:014310790 0 W/14310790-14310790 FN3390-S SNP C -> T AC=1;AN=184;BQB=0.880577;DP=3173;DP4=1514,1544,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.40746e-07;MQSB=0.951376;RPB=0.851974;SGB=13.188;VDB=0.54266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.5:14313272 chr05:014313272 0 W/14313272-14313272 FN1480-S Single Base Substitution C-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. W596-1-1.SNP.5:14328799 chr05:014328799 0 W/14328799-14328799 W596-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN2377.SNP.5:14329207 chr05:014329207 0 W/14329207-14329207 FN2377 SNP C -> T AC=2;AN=192;BQB=0.687116;DP=4876;DP4=2675,1758,37,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.73373e-28;MQSB=0.0527639;RPB=0.459755;SGB=69.9287;VDB=0.753508;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.5:14329649 chr05:014329649 0 W/14329649-14329649 FN824-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3809-S.SNP.5:14330675 chr05:014330675 0 W/14330675-14330675 FN3809-S SNP G -> A AC=1;AN=190;BQB=0.781462;DP=2907;DP4=1505,1296,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00103199;MQB=1.57935e-06;MQSB=0.994552;RPB=0.999994;SGB=62.7569;VDB=0.637244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G300E|647|LOC_Os05g24720|protein_coding|CODING|LOC_Os05g24720.1|3|1) FN1367-S.SNP.5:14331291 chr05:014331291 0 W/14331291-14331291 FN1367-S Single Base Substitution G-A SPLICE_SITE_ACCEPTOR HET LOC_Os05g24720 retrotransposon protein, putative, unclassified, expressed SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN3489-S.SNP.5:14341708 chr05:014341708 0 W/14341708-14341708 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.997145;DP=3342;DP4=1573,1659,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33986e-10;MQSB=0.99999;RPB=0.318078;SGB=56.8786;VDB=0.0350737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A259T|425|LOC_Os05g24740|protein_coding|CODING|LOC_Os05g24740.1|1|1) FN4100-S.SNP.5:14343444 chr05:014343444 0 W/14343444-14343444 FN4100-S SNP G -> A AC=1;AN=182;BQB=0.985885;DP=2748;DP4=1305,1356,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.38317e-09;MQSB=0.99996;RPB=0.285377;SGB=39.1386;VDB=0.385224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.5:14345624 chr05:014345624 0 W/14345624-14345624 FN1007-S Single Base Substitution C-T INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN3674-S.SNP.5:14347345 chr05:014347345 0 W/14347345-14347345 FN3674-S SNP A -> G AC=1;AN=190;BQB=0.841247;DP=3100;DP4=1679,1285,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38947e-07;MQSB=0.700586;RPB=0.163405;SGB=44.5415;VDB=0.0278522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:14347516 chr05:014347516 0 W/14347516-14347516 FN2247-S SNP T -> C AC=1;AN=190;BQB=0.146042;DP=4862;DP4=2021,2541,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36554e-07;MQSB=0.687554;RPB=0.271979;SGB=50.3161;VDB=0.00090169;EFF=INTERGENIC(MODIFIER||||||||||1) FN-412.SNP.5:14348702 chr05:014348702 0 W/14348702-14348702 FN-412 Single Base Substitution C-A INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN2299.SNP.5:14354152 chr05:014354152 0 W/14354152-14354152 FN2299 SNP G -> A AC=1;AN=192;BQB=0.99286;DP=4941;DP4=2609,1983,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.76257e-05;MQSB=0.991989;RPB=0.425865;SGB=16.0922;VDB=0.519344;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.5:14360425 chr05:014360425 0 W/14360425-14360425 FN1490-S Single Base Substitution C-T INTERGENIC Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN3669-S.SNP.5:14360425 chr05:014360425 0 W/14360425-14360425 FN3669-S SNP C -> T AC=2;AN=190;BQB=0.955279;DP=2685;DP4=1464,1117,9,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.15529e-10;MQSB=0.98916;RPB=0.0238925;SGB=50.3161;VDB=0.493997;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.5:14365635 chr05:014365635 0 W/14365635-14365635 FN684-S Single Base Substitution G-A INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN399-S.SNP.5:14367557 chr05:014367557 0 W/14367557-14367557 FN399-S Single Base Substitution C-G INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2591-S.SNP.5:14385251 chr05:014385251 0 W/14385251-14385251 FN2591-S SNP G -> T AC=1;AN=198;BQB=0.879574;DP=4214;DP4=2076,1953,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.31594e-08;MQSB=0.457401;RPB=1;SGB=43.7442;VDB=0.0985666;EFF=INTRON(MODIFIER||||289|LOC_Os05g24810|protein_coding|CODING|LOC_Os05g24810.1|4|1) FN1493-S.SNP.5:14391265 chr05:014391265 0 W/14391265-14391265 FN1493-S Single Base Substitution T-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN880-S.SNP.5:14394851 chr05:014394851 0 W/14394851-14394851 FN880-S Single Base Substitution T-C INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN747-S.SNP.5:14395523 chr05:014395523 0 W/14395523-14395523 FN747-S Single Base Substitution T-C INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN321-S.SNP.5:14400780 chr05:014400780 0 W/14400780-14400780 FN321-S Single Base Substitution C-T INTRON HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3970-S.SNP.5:14401067 chr05:014401067 0 W/14401067-14401067 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.999521;DP=2882;DP4=1555,1246,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.43037e-10;MQSB=0.920616;RPB=0.945898;SGB=69.8961;VDB=0.229245;EFF=INTRON(MODIFIER||||632|LOC_Os05g24850|protein_coding|CODING|LOC_Os05g24850.1|1|1) 704-1-1.SNP.5:14403253 chr05:014403253 0 W/14403253-14403253 704-1-1 Single Base Substitution G-A INTRON Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN2593-S.SNP.5:14405226 chr05:014405226 0 W/14405226-14405226 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.823149;DP=3856;DP4=1827,1790,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000259336;MQB=5.96627e-11;MQSB=0.872814;RPB=0.649577;SGB=83.2905;VDB=0.540632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.5:14407123 chr05:014407123 0 W/14407123-14407123 FN2116-S SNP G -> T AC=1;AN=168;BQB=0.0306617;DP=3767;DP4=1684,2016,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.3438e-09;MQSB=0.532648;RPB=0.990376;SGB=-251.177;VDB=0.0516248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.5:14420862 chr05:014420862 0 W/14420862-14420862 FN1241-S Single Base Substitution A-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2621-S.SNP.5:14421979 chr05:014421979 0 W/14421979-14421979 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.264576;DP=4700;DP4=2267,2189,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67625e-17;MQSB=0.842526;RPB=0.986692;SGB=68.5625;VDB=0.900589;EFF=INTRON(MODIFIER||||836|LOC_Os05g24910|protein_coding|CODING|LOC_Os05g24910.1|1|1) FN3579-S.SNP.5:14426142 chr05:014426142 0 W/14426142-14426142 FN3579-S SNP A -> G AC=1;AN=188;BQB=0.999839;DP=3095;DP4=1436,1553,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00420032;MQB=0.110476;MQSB=0.741666;RPB=0.80281;SGB=71.6954;VDB=0.762774;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K618R|836|LOC_Os05g24910|protein_coding|CODING|LOC_Os05g24910.1|6|1) FN1309-S.SNP.5:14429626 chr05:014429626 0 W/14429626-14429626 FN1309-S Single Base Substitution G-A INTRON HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN594-S.SNP.5:14432060 chr05:014432060 0 W/14432060-14432060 FN594-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN594-S.SNP.5:14432061 chr05:014432061 0 W/14432061-14432061 FN594-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g24930 PPR repeat containing protein, expressed SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2780-S.SNP.5:14436459 chr05:014436459 0 W/14436459-14436459 FN2780-S SNP T -> C AC=1;AN=198;BQB=0.961798;DP=3715;DP4=1610,1737,16,17;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00376851;MQB=1.93064e-12;MQSB=0.002889;RPB=0.906484;SGB=108.456;VDB=0.110498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.5:14438638 chr05:014438638 0 W/14438638-14438638 FN2612-S SNP C -> A AC=1;AN=198;BQB=0.791865;DP=3971;DP4=1986,1753,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.0010073;MQB=1.88687e-13;MQSB=0.993484;RPB=0.302893;SGB=90.4807;VDB=0.64013;EFF=INTRON(MODIFIER||||762|LOC_Os05g24950|protein_coding|CODING|LOC_Os05g24950.1|5|1) FN2749-S.SNP.5:14444677 chr05:014444677 0 W/14444677-14444677 FN2749-S SNP A -> T AC=2;AN=200;BQB=0.522649;DP=5036;DP4=2393,2391,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.75003e-18;MQSB=0.998128;RPB=0.282575;SGB=101.557;VDB=0.536846;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.5:14444785 chr05:014444785 0 W/14444785-14444785 FN-66 Single Base Substitution G-A INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1407-S.SNP.5:14444785 chr05:014444785 0 W/14444785-14444785 FN1407-S Single Base Substitution G-A INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2658-S.SNP.5:14444785 chr05:014444785 0 W/14444785-14444785 FN2658-S SNP G -> A AC=2;AN=200;BQB=0.685911;DP=5077;DP4=2619,2219,23,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.85174e-25;MQSB=0.890086;RPB=0.939561;SGB=192.42;VDB=0.951873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.5:14449526 chr05:014449526 0 W/14449526-14449526 FN1385-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN4001-S.SNP.5:14449526 chr05:014449526 0 W/14449526-14449526 FN4001-S SNP G -> A AC=2;AN=168;BQB=0.868722;DP=2585;DP4=1329,1155,13,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.65964e-11;MQSB=0.875424;RPB=0.848718;SGB=83.1885;VDB=0.781662;EFF=UTR_3_PRIME(MODIFIER||415||106|LOC_Os05g24970|protein_coding|CODING|LOC_Os05g24970.1|4|1),UTR_3_PRIME(MODIFIER||415||105|LOC_Os05g24970|protein_coding|CODING|LOC_Os05g24970.2|4|1),UTR_3_PRIME(MODIFIER||600||72|LOC_Os05g24970|protein_coding|CODING|LOC_Os05g24970.3|3|1) FN552-S.SNP.5:14449526 chr05:014449526 0 W/14449526-14449526 FN552-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN820-S.SNP.5:14449526 chr05:014449526 0 W/14449526-14449526 FN820-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN1380-S.SNP.5:14460023 chr05:014460023 0 W/14460023-14460023 FN1380-S Single Base Substitution A-G INTRON HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1285-S.SNP.5:14460975 chr05:014460975 0 W/14460975-14460975 FN1285-S Single Base Substitution C-A INTRON HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2614-S.SNP.5:14462885 chr05:014462885 0 W/14462885-14462885 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.768104;DP=4260;DP4=2352,1724,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000234742;MQB=4.6127e-06;MQSB=0.399467;RPB=0.822828;SGB=36.5539;VDB=0.976738;EFF=INTRON(MODIFIER||||579|LOC_Os05g24990|protein_coding|CODING|LOC_Os05g24990.1|3|1) FN707-S.SNP.5:14463559 chr05:014463559 0 W/14463559-14463559 FN707-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN3445-S.SNP.5:14464831 chr05:014464831 0 W/14464831-14464831 FN3445-S SNP A -> G AC=1;AN=184;BQB=0.981305;DP=2445;DP4=1205,1175,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60573e-09;MQSB=0.856353;RPB=0.96332;SGB=39.2697;VDB=0.801406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:14472026 chr05:014472026 0 W/14472026-14472026 FN2572-S SNP A -> C AC=1;AN=198;BQB=0.0548692;DP=3991;DP4=1733,2001,18,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.18777e-14;MQSB=0.763475;RPB=0.803535;SGB=65.676;VDB=0.18111;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.5:14500998 chr05:014500998 0 W/14500998-14500998 FN769-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g25060 PPR repeat domain containing protein, putative, expressed SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1243-S.SNP.5:14502142 chr05:014502142 0 W/14502142-14502142 FN1243-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g25060 PPR repeat domain containing protein, putative, expressed SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2739-S.SNP.5:14505877 chr05:014505877 0 W/14505877-14505877 FN2739-S SNP T -> C AC=1;AN=200;BQB=0.975509;DP=4403;DP4=2039,2136,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21075e-08;MQSB=0.987213;RPB=0.988148;SGB=51.0851;VDB=0.497999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M217V|874|LOC_Os05g25060|protein_coding|CODING|LOC_Os05g25060.1|2|1) FN3385-S.SNP.5:14509751 chr05:014509751 0 W/14509751-14509751 FN3385-S SNP A -> T AC=1;AN=184;BQB=0.991556;DP=2705;DP4=1326,1227,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.67522e-06;MQSB=0.893143;RPB=0.683927;SGB=35.1773;VDB=0.807765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.5:14513163 chr05:014513163 0 W/14513163-14513163 FN2480 SNP A -> G AC=1;AN=200;BQB=0.999839;DP=4468;DP4=2137,2059,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.95047e-13;MQSB=0.99577;RPB=0.979031;SGB=61.9006;VDB=0.232344;EFF=INTRON(MODIFIER||||419|LOC_Os05g25070|protein_coding|CODING|LOC_Os05g25070.1|5|1) FN3357-S.SNP.5:14516765 chr05:014516765 0 W/14516765-14516765 FN3357-S SNP G -> T AC=2;AN=184;BQB=0.969535;DP=2957;DP4=1648,1193,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.89968e-16;MQSB=0.868928;RPB=0.687893;SGB=121.091;VDB=0.793484;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.5:14519304 chr05:014519304 0 W/14519304-14519304 FN1096-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1195-S.SNP.5:14519585 chr05:014519585 0 W/14519585-14519585 FN1195-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os05g25075 retrotransposon protein, putative, unclassified, expressed SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1263-S.SNP.5:14520212 chr05:014520212 0 W/14520212-14520212 FN1263-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN696-S.SNP.5:14528682 chr05:014528682 0 W/14528682-14528682 FN696-S Single Base Substitution T-C INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1395-S.SNP.5:14535457 chr05:014535457 0 W/14535457-14535457 FN1395-S Single Base Substitution A-C INTRON HOMO SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN3293-S.SNP.5:14535457 chr05:014535457 0 W/14535457-14535457 FN3293-S SNP A -> C AC=1;AN=184;BQB=0.94124;DP=3004;DP4=1477,1414,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000665779;MQB=6.90753e-12;MQSB=0.379075;RPB=0.601602;SGB=74.4875;VDB=0.155856;EFF=INTRON(MODIFIER||||1123|LOC_Os05g25100|protein_coding|CODING|LOC_Os05g25100.1|10|1) FN2768-S.SNP.5:14539874 chr05:014539874 0 W/14539874-14539874 FN2768-S SNP G -> C AC=1;AN=198;BQB=0.935897;DP=4179;DP4=1882,2106,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000717875;MQB=6.46332e-11;MQSB=0.47935;RPB=0.812024;SGB=52.7004;VDB=0.784028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T163R|1123|LOC_Os05g25100|protein_coding|CODING|LOC_Os05g25100.1|6|1) FN4039-S.SNP.5:14539972 chr05:014539972 0 W/14539972-14539972 FN4039-S SNP C -> T AC=1;AN=168;BQB=0.388227;DP=2804;DP4=1205,1488,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00142653;MQB=1.19774e-07;MQSB=0.982498;RPB=0.954813;SGB=5.62151;VDB=0.96932;EFF=INTRON(MODIFIER||||1123|LOC_Os05g25100|protein_coding|CODING|LOC_Os05g25100.1|5|1) FN1026-S.SNP.5:14541297 chr05:014541297 0 W/14541297-14541297 FN1026-S Single Base Substitution G-T INTRON HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2629-S.SNP.5:14544369 chr05:014544369 0 W/14544369-14544369 FN2629-S SNP T -> A AC=1;AN=200;BQB=0.964768;DP=5074;DP4=2483,2385,18,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.42871e-14;MQSB=0.949244;RPB=0.718632;SGB=45.1159;VDB=0.345934;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.5:14549571 chr05:014549571 0 W/14549571-14549571 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.9693;DP=3288;DP4=1767,1398,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000286666;MQSB=0.0265211;RPB=0.577768;SGB=49.0954;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.5:14550440 chr05:014550440 0 W/14550440-14550440 FN2198-S SNP G -> A AC=2;AN=190;BQB=0.117566;DP=3981;DP4=1776,1854,5,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.71917e-12;MQSB=0.579022;RPB=0.80342;SGB=71.6393;VDB=0.526677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.5:14554857 chr05:014554857 0 W/14554857-14554857 FN1423-S Single Base Substitution C-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.5:14554857 chr05:014554857 0 W/14554857-14554857 FN1433-S Single Base Substitution C-G INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2646-S.SNP.5:14555606 chr05:014555606 0 W/14555606-14555606 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.873647;DP=4855;DP4=1919,2697,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.59293e-11;MQSB=0.682249;RPB=0.0960472;SGB=54.6902;VDB=0.00453739;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.5:14557293 chr05:014557293 0 W/14557293-14557293 FN673-S Single Base Substitution G-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN673-S.SNP.5:14557294 chr05:014557294 0 W/14557294-14557294 FN673-S Single Base Substitution C-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN2493.SNP.5:14557917 chr05:014557917 0 W/14557917-14557917 FN2493 SNP C -> T AC=1;AN=200;BQB=0.825491;DP=2944;DP4=1589,980,5,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000166345;MQSB=1.54134e-07;RPB=0.843826;SGB=19.0642;VDB=0.94742;EFF=INTERGENIC(MODIFIER||||||||||1) FN260-S.SNP.5:14558289 chr05:014558289 0 W/14558289-14558289 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN2426.SNP.5:14576811 chr05:014576811 0 W/14576811-14576811 FN2426 SNP A -> G AC=1;AN=200;BQB=0.968956;DP=4792;DP4=2167,2311,16,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00813856;MQB=1.0388e-13;MQSB=0.899007;RPB=0.342204;SGB=65.9573;VDB=0.0454586;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.5:14577128 chr05:014577128 0 W/14577128-14577128 FN-94 Single Base Substitution G-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN892-S.SNP.5:14582624 chr05:014582624 0 W/14582624-14582624 FN892-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g25170 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3463-S.SNP.5:14583871 chr05:014583871 0 W/14583871-14583871 FN3463-S SNP T -> C AC=1;AN=184;BQB=0.966697;DP=2827;DP4=1320,1395,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.010612;MQB=0.828512;MQSB=0.203705;RPB=0.996335;SGB=66.8296;VDB=0.834391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V561A|925|LOC_Os05g25170|protein_coding|CODING|LOC_Os05g25170.1|4|1) FN2172-S.SNP.5:14591026 chr05:014591026 0 W/14591026-14591026 FN2172-S SNP G -> A AC=2;AN=168;BQB=0.195396;DP=4334;DP4=2082,2193,20,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.21206e-14;MQSB=0.998761;RPB=0.510924;SGB=-349.714;VDB=0.167759;EFF=INTRON(MODIFIER||||463|LOC_Os05g25180|protein_coding|CODING|LOC_Os05g25180.1|3|1) FN2172-S.SNP.5:14591027 chr05:014591027 0 W/14591027-14591027 FN2172-S SNP G -> A AC=2;AN=168;BQB=0.303279;DP=4329;DP4=2073,2192,20,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.37762e-16;MQSB=0.993801;RPB=0.422424;SGB=-391.57;VDB=0.0485577;EFF=INTRON(MODIFIER||||463|LOC_Os05g25180|protein_coding|CODING|LOC_Os05g25180.1|3|1) FN3413-S.SNP.5:14598178 chr05:014598178 0 W/14598178-14598178 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.990195;DP=2972;DP4=1642,1265,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.43429e-10;MQSB=0.836899;RPB=0.191822;SGB=62.3078;VDB=0.836276;EFF=UTR_3_PRIME(MODIFIER||36||577|LOC_Os05g25194|protein_coding|CODING|LOC_Os05g25194.1|6|1),UTR_3_PRIME(MODIFIER||36||577|LOC_Os05g25194|protein_coding|CODING|LOC_Os05g25194.2|5|1) FN-410.SNP.5:14602913 chr05:014602913 0 W/14602913-14602913 FN-410 Single Base Substitution G-A INTRON HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2460.SNP.5:14606414 chr05:014606414 0 W/14606414-14606414 FN2460 SNP G -> A AC=1;AN=200;BQB=0.970372;DP=4468;DP4=2690,1536,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223814;MQB=1.01619e-06;MQSB=0.446284;RPB=0.186814;SGB=21.6694;VDB=0.213544;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.5:14607903 chr05:014607903 0 W/14607903-14607903 FN796-S Single Base Substitution T-G INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN-85.SNP.5:14608006 chr05:014608006 0 W/14608006-14608006 FN-85 Single Base Substitution G-A INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1142-S.SNP.5:14608530 chr05:014608530 0 W/14608530-14608530 FN1142-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2545-S.SNP.5:14609222 chr05:014609222 0 W/14609222-14609222 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.54187;DP=3852;DP4=1671,1975,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.53495e-05;MQSB=0.980172;RPB=0.834649;SGB=36.5539;VDB=0.968659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.5:14612448 chr05:014612448 0 W/14612448-14612448 FN3600-S SNP C -> T AC=1;AN=190;BQB=0.827844;DP=2779;DP4=1366,1330,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0115149;MQB=0.951632;MQSB=0.0619161;RPB=0.776879;SGB=58.2031;VDB=0.717994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.5:14614175 chr05:014614175 0 W/14614175-14614175 FN3716-S SNP T -> C AC=1;AN=190;BQB=0.986694;DP=2808;DP4=1147,1557,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.97189e-06;MQSB=0.794718;RPB=0.243306;SGB=21.8853;VDB=0.393825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:14630420 chr05:014630420 0 W/14630420-14630420 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.296941;DP=4939;DP4=2350,2392,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84731e-17;MQSB=0.781425;RPB=0.040917;SGB=60.747;VDB=0.0772881;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.5:14633362 chr05:014633362 0 W/14633362-14633362 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.528295;DP=2468;DP4=1226,1190,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000405186;MQB=1.58796e-08;MQSB=0.96113;RPB=0.376604;SGB=17.4413;VDB=0.6928;EFF=INTRON(MODIFIER||||270|LOC_Os05g25230|protein_coding|CODING|LOC_Os05g25230.1|2|1) FN4138-S.SNP.5:14637454 chr05:014637454 0 W/14637454-14637454 FN4138-S SNP C -> A AC=1;AN=170;BQB=0.98578;DP=2501;DP4=1077,1358,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.11684e-08;MQSB=0.99917;RPB=0.0500752;SGB=56.7575;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.5:14641284 chr05:014641284 0 W/14641284-14641284 FN3373-S SNP T -> G AC=1;AN=184;BQB=0.999663;DP=2849;DP4=1550,1163,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.18964e-08;MQSB=0.903818;RPB=0.838909;SGB=18.2315;VDB=0.600287;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.5:14642371 chr05:014642371 0 W/14642371-14642371 FN791-S Single Base Substitution T-A INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3775-S.SNP.5:14644252 chr05:014644252 0 W/14644252-14644252 FN3775-S SNP G -> T AC=2;AN=190;BQB=0.744084;DP=2433;DP4=1232,1133,12,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.85392e-09;MQSB=0.996864;RPB=0.999859;SGB=85.5263;VDB=0.0845376;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.5:14644534 chr05:014644534 0 W/14644534-14644534 FN545-S Single Base Substitution C-T INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3777-S.SNP.5:14653510 chr05:014653510 0 W/14653510-14653510 FN3777-S SNP A -> C AC=1;AN=190;BQB=0.982219;DP=3143;DP4=1929,1067,15,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000318167;MQB=9.95541e-11;MQSB=0.730125;RPB=0.293802;SGB=50.3161;VDB=0.345961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.5:14661550 chr05:014661550 0 W/14661550-14661550 FN3766-S SNP T -> A AC=2;AN=190;BQB=0.973886;DP=2654;DP4=1273,1289,9,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.01816e-15;MQSB=0.999566;RPB=0.810607;SGB=78.7471;VDB=0.177881;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.5:14662676 chr05:014662676 0 W/14662676-14662676 FN433-S Single Base Substitution G-C INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN1109-S.SNP.5:14673902 chr05:014673902 0 W/14673902-14673902 FN1109-S Single Base Substitution C-G INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1582-S.SNP.5:14674614 chr05:014674614 0 W/14674614-14674614 FN1582-S Single Base Substitution A-G INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3446-S.SNP.5:14675604 chr05:014675604 0 W/14675604-14675604 FN3446-S SNP C -> A AC=1;AN=184;BQB=0.996988;DP=3330;DP4=1528,1637,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00025299;MQSB=0.919148;RPB=0.117359;SGB=30.6558;VDB=0.360182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L191I|669|LOC_Os05g25280|protein_coding|CODING|LOC_Os05g25280.1|3|1) FN859-S.SNP.5:14699983 chr05:014699983 0 W/14699983-14699983 FN859-S Single Base Substitution C-T INTRON HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2241-S.SNP.5:14705957 chr05:014705957 0 W/14705957-14705957 FN2241-S SNP C -> T AC=2;AN=190;BQB=0.398546;DP=5366;DP4=2800,2162,19,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.55264e-18;MQSB=0.271817;RPB=0.853408;SGB=32.0809;VDB=0.506689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.5:14705965 chr05:014705965 0 W/14705965-14705965 FN2241-S SNP G -> T AC=2;AN=190;BQB=0.585223;DP=5333;DP4=2835,2063,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.92412e-20;MQSB=0.272188;RPB=0.990241;SGB=69.6295;VDB=0.330875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.5:14707109 chr05:014707109 0 W/14707109-14707109 FN3515-S SNP A -> G AC=1;AN=188;BQB=0.886548;DP=2860;DP4=1522,1173,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.43668e-09;MQSB=0.926674;RPB=0.916821;SGB=26.0762;VDB=0.966718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.5:14709396 chr05:014709396 0 W/14709396-14709396 FN3489-S SNP A -> G AC=1;AN=184;BQB=0.466237;DP=3342;DP4=1876,1315,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0149611;MQB=6.98873e-08;MQSB=0.853483;RPB=0.982842;SGB=43.4494;VDB=0.290175;EFF=INTRON(MODIFIER||||896|LOC_Os05g25330|protein_coding|CODING|LOC_Os05g25330.1|2|1) FN1482-S.SNP.5:14709743 chr05:014709743 0 W/14709743-14709743 FN1482-S Single Base Substitution G-A INTRON HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1497-S.SNP.5:14715132 chr05:014715132 0 W/14715132-14715132 FN1497-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g25340 expressed protein SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN621-S.SNP.5:14717094 chr05:014717094 0 W/14717094-14717094 FN621-S Single Base Substitution C-T INTRON HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3950-S.SNP.5:14730140 chr05:014730140 0 W/14730140-14730140 FN3950-S SNP A -> G AC=1;AN=168;BQB=0.943294;DP=2545;DP4=1477,954,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.63562e-06;MQSB=0.983569;RPB=0.72101;SGB=38.8805;VDB=0.705724;EFF=INTRON(MODIFIER||||846|LOC_Os05g25370|protein_coding|CODING|LOC_Os05g25370.1|1|1) FN2233-S.SNP.5:14738871 chr05:014738871 0 W/14738871-14738871 FN2233-S SNP T -> C AC=1;AN=190;BQB=0.739538;DP=4583;DP4=2310,1860,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000886254;MQSB=0.0198326;RPB=0.119714;SGB=21.7749;VDB=0.317275;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.5:14744316 chr05:014744316 0 W/14744316-14744316 FN3653-S SNP A -> G AC=1;AN=190;BQB=0.834526;DP=3027;DP4=1258,1579,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.64274e-09;MQSB=0.783112;RPB=0.26863;SGB=39.6545;VDB=0.0386299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.5:14746869 chr05:014746869 0 W/14746869-14746869 FN3659-S SNP T -> C AC=1;AN=190;BQB=0.994713;DP=3677;DP4=1653,1861,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0293718;MQB=0.294249;MQSB=5.55914e-28;RPB=0.486175;SGB=44.5415;VDB=0.918943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.5:14748821 chr05:014748821 0 W/14748821-14748821 FN2577-S SNP G -> T AC=2;AN=186;BQB=0.920543;DP=3837;DP4=2250,1323,20,13;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0;MQB=1.91876e-14;MQSB=0.166509;RPB=0.958093;SGB=146.046;VDB=0.250638;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.5:14761384 chr05:014761384 0 W/14761384-14761384 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1509-S.SNP.5:14774511 chr05:014774511 0 W/14774511-14774511 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN4082-S.SNP.5:14775792 chr05:014775792 0 W/14775792-14775792 FN4082-S SNP A -> C AC=1;AN=182;BQB=0.99321;DP=3136;DP4=1660,1392,11,10;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0245536;MQB=0.445736;MQSB=4.96384e-07;RPB=0.414173;SGB=89.2199;VDB=0.563198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.5:14776518 chr05:014776518 0 W/14776518-14776518 FN2540-S SNP G -> A AC=1;AN=190;BQB=0.628411;DP=3620;DP4=1795,1648,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000828729;MQB=7.01417e-06;MQSB=0.126055;RPB=0.280065;SGB=16.3688;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN515-S.SNP.5:14777158 chr05:014777158 0 W/14777158-14777158 FN515-S Single Base Substitution A-G INTERGENIC HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN797-S.SNP.5:14785424 chr05:014785424 0 W/14785424-14785424 FN797-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3495-S.SNP.5:14794105 chr05:014794105 0 W/14794105-14794105 FN3495-S SNP G -> C AC=1;AN=188;BQB=0.86517;DP=3518;DP4=1687,1753,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.47086e-13;MQSB=0.667572;RPB=0.172761;SGB=89.8686;VDB=0.495303;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.5:14794321 chr05:014794321 0 W/14794321-14794321 FN654-S Single Base Substitution G-A INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2202-S.SNP.5:14801770 chr05:014801770 0 W/14801770-14801770 FN2202-S SNP C -> T AC=2;AN=190;BQB=0.992992;DP=4207;DP4=1874,2075,14,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000713097;MQB=7.67658e-21;MQSB=0.0117483;RPB=0.843515;SGB=176.604;VDB=0.559093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.5:14801849 chr05:014801849 0 W/14801849-14801849 FN2473 SNP T -> A AC=2;AN=200;BQB=0.954031;DP=4689;DP4=2594,1594,17,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.41202e-15;MQSB=0.706946;RPB=0.273577;SGB=63.3521;VDB=0.635498;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.5:14810957 chr05:014810957 0 W/14810957-14810957 FN443-S Single Base Substitution G-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN1471-S.SNP.5:14818862 chr05:014818862 0 W/14818862-14818862 FN1471-S SNP A -> T AC=1;AN=188;BQB=0.921977;DP=3399;DP4=2182,1166,16,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99152e-07;MQSB=0.831136;RPB=0.856063;SGB=-11.74;VDB=0.583533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3561-S.SNP.5:14821482 chr05:014821482 0 W/14821482-14821482 FN3561-S SNP G -> A AC=2;AN=188;BQB=0.98779;DP=2587;DP4=1116,1358,21,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.1668e-27;MQSB=0.924619;RPB=0.547204;SGB=182.541;VDB=0.246833;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.5:14828039 chr05:014828039 0 W/14828039-14828039 FN-185 Single Base Substitution A-C INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1389-S.SNP.5:14830369 chr05:014830369 0 W/14830369-14830369 FN1389-S Single Base Substitution C-T INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN576-S.SNP.5:14832644 chr05:014832644 0 W/14832644-14832644 FN576-S Single Base Substitution C-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN898-S.SNP.5:14835515 chr05:014835515 0 W/14835515-14835515 FN898-S Single Base Substitution C-T INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN4141-S.SNP.5:14844948 chr05:014844948 0 W/14844948-14844948 FN4141-S SNP T -> C AC=2;AN=170;BQB=0.997778;DP=1428;DP4=1056,255,10,3;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=4.80339e-06;MQSB=3.23863e-13;RPB=0.954743;SGB=34.878;VDB=0.188744;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.5:14846226 chr05:014846226 0 W/14846226-14846226 FN3864-S SNP G -> T AC=2;AN=158;BQB=0.643351;DP=2468;DP4=1136,1212,18,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.53135e-17;MQSB=0.995513;RPB=0.491271;SGB=108.201;VDB=0.0339096;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.5:14846688 chr05:014846688 0 W/14846688-14846688 FN400-S Single Base Substitution C-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1094-S.SNP.5:14847781 chr05:014847781 0 W/14847781-14847781 FN1094-S Single Base Substitution A-G INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3568-S.SNP.5:14869972 chr05:014869972 0 W/14869972-14869972 FN3568-S SNP T -> A AC=2;AN=188;BQB=0.384468;DP=3439;DP4=1763,1517,23,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.61204e-17;MQSB=0.432238;RPB=0.846182;SGB=121.023;VDB=0.705606;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.5:14870455 chr05:014870455 0 W/14870455-14870455 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.978406;DP=4737;DP4=2132,2291,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75206e-18;MQSB=0.995182;RPB=0.205379;SGB=33.5675;VDB=0.0827614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.5:14871782 chr05:014871782 0 W/14871782-14871782 FN2107-S SNP C -> G AC=1;AN=168;BQB=0.00840853;DP=3262;DP4=1516,1702,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00056254;MQSB=0.969673;RPB=0.475697;SGB=-82.6471;VDB=0.947146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.5:14874707 chr05:014874707 0 W/14874707-14874707 FN3941-S SNP G -> A AC=2;AN=168;BQB=0.533336;DP=2538;DP4=1204,1256,7,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.49565e-08;MQSB=0.826252;RPB=0.131811;SGB=69.8961;VDB=0.42167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.5:14878393 chr05:014878393 0 W/14878393-14878393 FN3375-S SNP C -> G AC=1;AN=184;BQB=0.805305;DP=3317;DP4=1584,1631,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.31479e-06;MQSB=0.995263;RPB=0.860998;SGB=32.2261;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.5:14880853 chr05:014880853 0 W/14880853-14880853 FN2456 SNP G -> A AC=1;AN=200;BQB=0.982083;DP=5356;DP4=2411,2670,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000186707;MQB=9.3655e-09;MQSB=0.92781;RPB=0.0791373;SGB=72.6852;VDB=0.351899;EFF=INTRON(MODIFIER||||686|LOC_Os05g25600|protein_coding|CODING|LOC_Os05g25600.1|3|1) FN2122-S.SNP.5:14881394 chr05:014881394 0 W/14881394-14881394 FN2122-S SNP T -> G AC=2;AN=168;BQB=0.278385;DP=4055;DP4=1663,2320,24,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.83243e-28;MQSB=0.988677;RPB=0.226686;SGB=-247.839;VDB=0.021758;EFF=INTRON(MODIFIER||||686|LOC_Os05g25600|protein_coding|CODING|LOC_Os05g25600.1|3|1) FN3966-S.SNP.5:14884050 chr05:014884050 0 W/14884050-14884050 FN3966-S SNP G -> A AC=2;AN=168;BQB=0.792295;DP=3113;DP4=1697,1249,22,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23115e-12;MQSB=0.0392229;RPB=0.742496;SGB=89.641;VDB=0.439168;EFF=INTRON(MODIFIER||||686|LOC_Os05g25600|protein_coding|CODING|LOC_Os05g25600.1|4|1) FN1113-S.SNP.5:14884147 chr05:014884147 0 W/14884147-14884147 FN1113-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g25600 transposon protein, putative, unclassified, expressed SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2452.SNP.5:14888315 chr05:014888315 0 W/14888315-14888315 FN2452 SNP C -> G AC=1;AN=200;BQB=0.99697;DP=4676;DP4=2055,2369,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30972e-10;MQSB=0.965167;RPB=0.980432;SGB=54.6902;VDB=0.729744;EFF=INTRON(MODIFIER||||513|LOC_Os05g25610|protein_coding|CODING|LOC_Os05g25610.1|5|1) FN2471.SNP.5:14890984 chr05:014890984 0 W/14890984-14890984 FN2471 SNP C -> T AC=1;AN=200;BQB=0.420866;DP=4225;DP4=2151,1870,23,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84718e-18;MQSB=0.929152;RPB=0.826413;SGB=76.378;VDB=0.9015;EFF=INTRON(MODIFIER||||513|LOC_Os05g25610|protein_coding|CODING|LOC_Os05g25610.1|2|1) FN2251-S.SNP.5:14895344 chr05:014895344 0 W/14895344-14895344 FN2251-S SNP C -> T AC=2;AN=190;BQB=0.456182;DP=4879;DP4=2259,2280,21,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.86751e-21;MQSB=0.645198;RPB=0.136933;SGB=-3.2522;VDB=0.143687;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.5:14908966 chr05:014908966 0 W/14908966-14908966 FN798-S Single Base Substitution C-A INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3631-S.SNP.5:14910573 chr05:014910573 0 W/14910573-14910573 FN3631-S SNP C -> T AC=1;AN=190;BQB=0.902607;DP=2302;DP4=1186,1016,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.58876e-07;MQSB=0.992008;RPB=0.664162;SGB=28.9929;VDB=0.454876;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.5:14911797 chr05:014911797 0 W/14911797-14911797 FN711-S Single Base Substitution G-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN-107.SNP.5:14916725 chr05:014916725 0 W/14916725-14916725 FN-107 Single Base Substitution C-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN1057-S.SNP.5:14919511 chr05:014919511 0 W/14919511-14919511 FN1057-S Single Base Substitution A-G INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2690-S.SNP.5:14921436 chr05:014921436 0 W/14921436-14921436 FN2690-S SNP C -> T AC=1;AN=200;BQB=0.133272;DP=4526;DP4=1857,2181,1,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000149814;MQSB=0.132726;RPB=0.998766;SGB=16.4591;VDB=0.00818751;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A15|249|LOC_Os05g25660|protein_coding|CODING|LOC_Os05g25660.1|1|1) FN323-S.SNP.5:14929504 chr05:014929504 0 W/14929504-14929504 FN323-S Single Base Substitution C-T INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2308.SNP.5:14939115 chr05:014939115 0 W/14939115-14939115 FN2308 SNP C -> T AC=1;AN=192;BQB=0.857373;DP=5018;DP4=2542,2231,18,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.43607e-15;MQSB=0.749537;RPB=0.992305;SGB=24.5626;VDB=0.649158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.5:14943537 chr05:014943537 0 W/14943537-14943537 FN1192-S Single Base Substitution G-C INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN-68.SNP.5:14944957 chr05:014944957 0 W/14944957-14944957 FN-68 Single Base Substitution A-G INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2374.SNP.5:14959790 chr05:014959790 0 W/14959790-14959790 FN2374 SNP A -> T AC=1;AN=192;BQB=0.205156;DP=5113;DP4=2237,2583,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.29489e-07;MQSB=0.497521;RPB=0.669053;SGB=13.5279;VDB=0.230033;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.5:14962092 chr05:014962092 0 W/14962092-14962092 FN952-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g25720 retrotransposon protein, putative, unclassified, expressed SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-408.SNP.5:14963875 chr05:014963875 0 W/14963875-14963875 FN-408 Single Base Substitution T-A STOP_LOST HET LOC_Os05g25720 retrotransposon protein, putative, unclassified, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN1227-S.SNP.5:14965592 chr05:014965592 0 W/14965592-14965592 FN1227-S Single Base Substitution C-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1227-S.SNP.5:14965593 chr05:014965593 0 W/14965593-14965593 FN1227-S Single Base Substitution C-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1258-S.SNP.5:14967461 chr05:014967461 0 W/14967461-14967461 FN1258-S Single Base Substitution A-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1154-S.SNP.5:14969182 chr05:014969182 0 W/14969182-14969182 FN1154-S Single Base Substitution C-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2431.SNP.5:14971365 chr05:014971365 0 W/14971365-14971365 FN2431 SNP C -> A AC=1;AN=200;BQB=0.999877;DP=6001;DP4=2910,2615,22,14;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.330445;MQB=0.00634864;MQSB=0;RPB=0.961332;SGB=38.383;VDB=0.718638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.5:14980319 chr05:014980319 0 W/14980319-14980319 FN2687-S SNP T -> C AC=1;AN=200;BQB=0.329426;DP=4895;DP4=2176,2470,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020429;MQB=6.6835e-05;MQSB=0.894343;RPB=0.76857;SGB=35.8441;VDB=0.877587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y720C|1185|LOC_Os05g25750|protein_coding|CODING|LOC_Os05g25750.1|4|1) FN4305-S.SNP.5:14983876 chr05:014983876 0 W/14983876-14983876 FN4305-S SNP A -> G AC=1;AN=170;BQB=0.674491;DP=2445;DP4=1233,1132,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000596562;MQSB=0.951516;RPB=0.985891;SGB=21.1076;VDB=0.745205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.5:14986169 chr05:014986169 0 W/14986169-14986169 FN2231-S SNP G -> A AC=2;AN=190;BQB=0.207206;DP=5044;DP4=2372,2244,40,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.15971e-31;MQSB=0.947935;RPB=0.87711;SGB=133.476;VDB=0.765418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.5:14988302 chr05:014988302 0 W/14988302-14988302 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.970465;DP=2619;DP4=1149,1383,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.66351e-05;MQSB=0.991935;RPB=0.396748;SGB=21.8853;VDB=0.721112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R57Q|200|LOC_Os05g25760|protein_coding|CODING|LOC_Os05g25760.1|2|1) FN-204.SNP.5:14996731 chr05:014996731 0 W/14996731-14996731 FN-204 Single Base Substitution G-A INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN2229-S.SNP.5:14997431 chr05:014997431 0 W/14997431-14997431 FN2229-S SNP T -> A AC=2;AN=190;BQB=0.529321;DP=5041;DP4=2834,1748,45,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.42056e-39;MQSB=0.999925;RPB=0.994979;SGB=249.333;VDB=0.126241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.5:14998752 chr05:014998752 0 W/14998752-14998752 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.912484;DP=2548;DP4=1297,1166,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07052e-11;MQSB=0.853021;RPB=0.411845;SGB=76.4186;VDB=0.534227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E143K|462|LOC_Os05g25780|protein_coding|CODING|LOC_Os05g25780.1|2|1) FN389-S.SNP.5:15001822 chr05:015001822 0 W/15001822-15001822 FN389-S Single Base Substitution T-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3440-S.SNP.5:15003882 chr05:015003882 0 W/15003882-15003882 FN3440-S SNP T -> C AC=1;AN=184;BQB=0.98545;DP=2502;DP4=1127,1289,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00039968;MQB=1.27268e-08;MQSB=0.959572;RPB=0.364845;SGB=62.3078;VDB=0.152765;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.5:15008004 chr05:015008004 0 W/15008004-15008004 FN579-S Single Base Substitution C-T INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN505-S.SNP.5:15010311 chr05:015010311 0 W/15010311-15010311 FN505-S Single Base Substitution A-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.5:15010312 chr05:015010312 0 W/15010312-15010312 FN505-S Single Base Substitution C-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN-47.SNP.5:15014735 chr05:015014735 0 W/15014735-15014735 FN-47 Single Base Substitution T-A INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN3360-S.SNP.5:15020020 chr05:015020020 0 W/15020020-15020020 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.983128;DP=3090;DP4=1581,1375,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.72529e-11;MQSB=0.975856;RPB=0.0621442;SGB=80.3949;VDB=0.597371;EFF=INTRON(MODIFIER||||752|LOC_Os05g25800|protein_coding|CODING|LOC_Os05g25800.1|5|1) FN2651-S.SNP.5:15021738 chr05:015021738 0 W/15021738-15021738 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.883401;DP=4919;DP4=2420,2199,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23859e-13;MQSB=0.638832;RPB=0.998007;SGB=72.7161;VDB=0.246253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.5:15023487 chr05:015023487 0 W/15023487-15023487 FN2650-S SNP A -> G AC=2;AN=200;BQB=0.988464;DP=4868;DP4=2393,2275,18,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.00602e-20;MQSB=0.885701;RPB=0.152226;SGB=146.368;VDB=0.0170219;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.5:15026893 chr05:015026893 0 W/15026893-15026893 FN-243 Single Base Substitution T-C INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN3480-S.SNP.5:15028752 chr05:015028752 0 W/15028752-15028752 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.711107;DP=1098;DP4=430,586,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0510018;MQB=0.934955;MQSB=0.976544;RPB=0.911471;SGB=25.1826;VDB=0.682972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.5:15031589 chr05:015031589 0 W/15031589-15031589 FN3494-S SNP A -> G AC=2;AN=184;BQB=0.972094;DP=3091;DP4=1218,1680,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.88809e-17;MQSB=0.999119;RPB=0.479339;SGB=95.6183;VDB=0.711326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.5:15065997 chr05:015065997 0 W/15065997-15065997 FN3833-S SNP C -> T AC=2;AN=190;BQB=0.941674;DP=2821;DP4=1322,1411,9,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.17294e-17;MQSB=0.950013;RPB=0.98179;SGB=126.511;VDB=0.808841;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L602|653|LOC_Os05g25890|protein_coding|CODING|LOC_Os05g25890.1|1|1) FN3058-S.SNP.5:15067657 chr05:015067657 0 W/15067657-15067657 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.532303;DP=2864;DP4=1297,1430,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.49738e-08;MQSB=0.999499;RPB=0.735085;SGB=33.3622;VDB=0.54253;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.5:15068152 chr05:015068152 0 W/15068152-15068152 FN929-S Single Base Substitution C-G INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN701-S.SNP.5:15069844 chr05:015069844 0 W/15069844-15069844 FN701-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g25910 DUF623 domain containing protein, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN846-S.SNP.5:15072408 chr05:015072408 0 W/15072408-15072408 FN846-S Single Base Substitution C-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1330-S.SNP.5:15072795 chr05:015072795 0 W/15072795-15072795 FN1330-S Single Base Substitution G-A INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2784-S.SNP.5:15082575 chr05:015082575 0 W/15082575-15082575 FN2784-S SNP A -> T AC=1;AN=198;BQB=0.975691;DP=3794;DP4=1945,1524,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.44974e-09;MQSB=0.778982;RPB=0.643242;SGB=95.5;VDB=0.913687;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.5:15096529 chr05:015096529 0 W/15096529-15096529 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1552-S.SNP.5:15097930 chr05:015097930 0 W/15097930-15097930 FN1552-S SNP C -> A AC=2;AN=188;BQB=0.822313;DP=2697;DP4=1499,1143,15,17;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.108639;MQB=0.422008;MQSB=0.100632;RPB=0.975196;SGB=30.2309;VDB=0.933472;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.5:15100914 chr05:015100914 0 W/15100914-15100914 FN-236 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1625-S.SNP.5:15109189 chr05:015109189 0 W/15109189-15109189 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.5:15109189 chr05:015109189 0 W/15109189-15109189 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.00268715;DP=2293;DP4=1165,1091,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.44619e-05;MQSB=4.466e-09;RPB=0.556397;SGB=-60.4458;VDB=0.370067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.5:15109742 chr05:015109742 0 W/15109742-15109742 FN1614-S Single Base Substitution A-T INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4145-S.SNP.5:15111316 chr05:015111316 0 W/15111316-15111316 FN4145-S SNP T -> C AC=1;AN=170;BQB=0.836412;DP=2559;DP4=1324,1148,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00117233;MQB=7.10517e-09;MQSB=0.744288;RPB=0.96478;SGB=45.206;VDB=0.600127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.5:15113531 chr05:015113531 0 W/15113531-15113531 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.758937;DP=4974;DP4=2206,2328,26,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.23359e-23;MQSB=0.0181607;RPB=0.455316;SGB=52.2813;VDB=0.494309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.5:15141041 chr05:015141041 0 W/15141041-15141041 FN1219-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g26040 pumilio-family RNA binding repeat containing protein, expressed SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2639-S.SNP.5:15149440 chr05:015149440 0 W/15149440-15149440 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.257594;DP=5079;DP4=2651,2164,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25879e-12;MQSB=0.946007;RPB=0.982821;SGB=65.5058;VDB=0.0542546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.5:15150262 chr05:015150262 0 W/15150262-15150262 FN1485-S Single Base Substitution A-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2724-S.SNP.5:15164702 chr05:015164702 0 W/15164702-15164702 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.922132;DP=5020;DP4=2329,2489,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00056e-05;MQSB=0.998642;RPB=0.916524;SGB=40.4492;VDB=0.788314;EFF=UTR_3_PRIME(MODIFIER||901||217|LOC_Os05g26070|protein_coding|CODING|LOC_Os05g26070.2|3|1),UTR_3_PRIME(MODIFIER||944||242|LOC_Os05g26070|protein_coding|CODING|LOC_Os05g26070.1|2|1) FN4072-S.SNP.5:15172291 chr05:015172291 0 W/15172291-15172291 FN4072-S SNP C -> T AC=1;AN=182;BQB=0.993376;DP=3221;DP4=1551,1599,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0425334;MQB=0.00193576;MQSB=0.999934;RPB=0.996419;SGB=71.1765;VDB=0.453283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T227M|414|LOC_Os05g26090|protein_coding|CODING|LOC_Os05g26090.1|2|1) FN927-S.SNP.5:15172617 chr05:015172617 0 W/15172617-15172617 FN927-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g26090 transposon protein, putative, CACTA, En/Spm sub-class SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2223-S.SNP.5:15176473 chr05:015176473 0 W/15176473-15176473 FN2223-S SNP G -> C AC=1;AN=190;BQB=0.697773;DP=4686;DP4=2076,2336,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0119505;MQB=4.19689e-07;MQSB=0.0010356;RPB=0.958306;SGB=-66.1037;VDB=0.0955373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A44P|784|LOC_Os05g26100|protein_coding|CODING|LOC_Os05g26100.1|1|1) FN2318.SNP.5:15180785 chr05:015180785 0 W/15180785-15180785 FN2318 SNP C -> T AC=1;AN=192;BQB=0.997064;DP=4140;DP4=2047,1822,8,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.96622e-06;MQSB=0.94577;RPB=0.986465;SGB=29.087;VDB=0.00860055;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.5:15186131 chr05:015186131 0 W/15186131-15186131 FN632-S Single Base Substitution T-C INTRON HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2442.SNP.5:15190698 chr05:015190698 0 W/15190698-15190698 FN2442 SNP T -> C AC=1;AN=200;BQB=0.602369;DP=4766;DP4=2031,2458,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.28676e-11;MQSB=0.117933;RPB=0.824393;SGB=15.9106;VDB=0.305532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.5:15191665 chr05:015191665 0 W/15191665-15191665 FN3793-S SNP T -> A AC=1;AN=190;BQB=0.967557;DP=2611;DP4=1243,1281,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0241287;MQB=0.155845;MQSB=2.83662e-07;RPB=0.599379;SGB=35.4339;VDB=0.283505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y189F|237|LOC_Os05g26120|protein_coding|CODING|LOC_Os05g26120.1|3|1) FN3903-S.SNP.5:15192978 chr05:015192978 0 W/15192978-15192978 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.99782;DP=2608;DP4=1175,1299,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.14758e-08;MQSB=0.097933;RPB=0.995374;SGB=54.2901;VDB=0.520176;EFF=INTERGENIC(MODIFIER||||||||||1) 705-1.SNP.5:15195888 chr05:015195888 0 W/15195888-15195888 705-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. FN2530-S.SNP.5:15198495 chr05:015198495 0 W/15198495-15198495 FN2530-S SNP A -> T AC=1;AN=186;BQB=0.961442;DP=3929;DP4=2309,1447,13,3;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000254518;MQB=5.75037e-09;MQSB=0.558317;RPB=0.735335;SGB=67.9293;VDB=0.22877;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.5:15199249 chr05:015199249 0 W/15199249-15199249 FN2487 SNP T -> C AC=1;AN=200;BQB=0.321489;DP=4748;DP4=1934,2482,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25584e-17;MQSB=0.997679;RPB=0.667277;SGB=101.557;VDB=0.132575;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.5:15205458 chr05:015205458 0 W/15205458-15205458 FN1757-S SNP C -> T AC=2;AN=188;BQB=0.966668;DP=3919;DP4=1920,1908,36,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.50664e-30;MQSB=0.83905;RPB=0.89899;SGB=-55.6328;VDB=0.271799;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.5:15211363 chr05:015211363 0 W/15211363-15211363 FN440-S Single Base Substitution G-T INTRON HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN1540-S.SNP.5:15219045 chr05:015219045 0 W/15219045-15219045 FN1540-S Single Base Substitution C-T INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN4188-S.SNP.5:15221847 chr05:015221847 0 W/15221847-15221847 FN4188-S SNP G -> A AC=2;AN=170;BQB=0.896408;DP=2730;DP4=1304,1347,17,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.25909e-25;MQSB=0.995376;RPB=0.455683;SGB=127.83;VDB=0.305533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G413R|919|LOC_Os05g26160|protein_coding|CODING|LOC_Os05g26160.1|3|1) FN4188-S.SNP.5:15221848 chr05:015221848 0 W/15221848-15221848 FN4188-S SNP G -> A AC=2;AN=170;BQB=0.972013;DP=2728;DP4=1294,1354,16,22;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.74655e-24;MQSB=0.996256;RPB=0.495583;SGB=163.381;VDB=0.425463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G413E|919|LOC_Os05g26160|protein_coding|CODING|LOC_Os05g26160.1|3|1) FN2281.SNP.5:15226696 chr05:015226696 0 W/15226696-15226696 FN2281 SNP T -> A AC=1;AN=192;BQB=0.269359;DP=4732;DP4=2286,2190,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.97664e-13;MQSB=0.931831;RPB=0.928389;SGB=113.111;VDB=0.924008;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R1143W|1681|LOC_Os05g26170|protein_coding|CODING|LOC_Os05g26170.1|7|1) FN378-S.SNP.5:15227733 chr05:015227733 0 W/15227733-15227733 FN378-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN3838-S.SNP.5:15237124 chr05:015237124 0 W/15237124-15237124 FN3838-S SNP C -> T AC=1;AN=190;BQB=0.926096;DP=3868;DP4=2051,1696,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0741986;MQB=0.94691;MQSB=1.41187e-20;RPB=0.914478;SGB=57.4238;VDB=0.349643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M820I|1445|LOC_Os05g26180|protein_coding|CODING|LOC_Os05g26180.1|1|1) FN3559-S.SNP.5:15237200 chr05:015237200 0 W/15237200-15237200 FN3559-S SNP A -> G AC=2;AN=188;BQB=0.881406;DP=3280;DP4=1478,1687,18,23;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00945122;MQB=8.99178e-15;MQSB=0.29289;RPB=0.640734;SGB=135.196;VDB=0.875963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L795S|1445|LOC_Os05g26180|protein_coding|CODING|LOC_Os05g26180.1|1|1) FN3090-S.SNP.5:15238877 chr05:015238877 0 W/15238877-15238877 FN3090-S SNP T -> C AC=2;AN=184;BQB=0.954363;DP=4621;DP4=2434,2024,13,10;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0339753;MQB=0.969822;MQSB=1.46443e-21;RPB=0.711495;SGB=98.4821;VDB=0.00626333;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q236R|1445|LOC_Os05g26180|protein_coding|CODING|LOC_Os05g26180.1|1|1) FN3474-S.SNP.5:15245749 chr05:015245749 0 W/15245749-15245749 FN3474-S SNP A -> T AC=1;AN=184;BQB=0.997469;DP=2881;DP4=1214,1408,14,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64581e-11;MQSB=0.243924;RPB=0.949878;SGB=85.0529;VDB=0.190491;EFF=UTR_5_PRIME(MODIFIER||122||110|LOC_Os05g26194|protein_coding|CODING|LOC_Os05g26194.1|1|1) FN3698-S.SNP.5:15247265 chr05:015247265 0 W/15247265-15247265 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.821874;DP=3637;DP4=1521,1989,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.77887e-09;MQSB=0.986295;RPB=0.712873;SGB=71.8647;VDB=0.0381486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.5:15251396 chr05:015251396 0 W/15251396-15251396 FN3774-S SNP G -> A AC=1;AN=190;BQB=0.999821;DP=3100;DP4=1290,1695,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22707e-07;MQSB=0.947805;RPB=0.407286;SGB=53.6492;VDB=0.951595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M140I|237|LOC_Os05g26210|protein_coding|CODING|LOC_Os05g26210.1|1|1) FN-218.SNP.5:15254842 chr05:015254842 0 W/15254842-15254842 FN-218 Single Base Substitution G-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN408-S.SNP.5:15257196 chr05:015257196 0 W/15257196-15257196 FN408-S Single Base Substitution T-A INTRON HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-5.SNP.5:15260833 chr05:015260833 0 W/15260833-15260833 FN-5 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g26230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN1400-S.SNP.5:15261862 chr05:015261862 0 W/15261862-15261862 FN1400-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g26230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN-105.SNP.5:15264211 chr05:015264211 0 W/15264211-15264211 FN-105 Single Base Substitution C-T INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN1451-S.SNP.5:15266531 chr05:015266531 0 W/15266531-15266531 FN1451-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN698-S.SNP.5:15267463 chr05:015267463 0 W/15267463-15267463 FN698-S Single Base Substitution C-T INTERGENIC HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN2166-S.SNP.5:15271549 chr05:015271549 0 W/15271549-15271549 FN2166-S SNP T -> A AC=1;AN=166;BQB=0.219931;DP=3823;DP4=1939,1842,13,12;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=4.12776e-09;MQSB=0.971626;RPB=0.945837;SGB=-71.2065;VDB=0.200195;EFF=INTRON(MODIFIER||||118|LOC_Os05g26250|protein_coding|CODING|LOC_Os05g26250.1|1|1),INTRON(MODIFIER||||118|LOC_Os05g26359|protein_coding|CODING|LOC_Os05g26359.1|1|1),INTRON(MODIFIER||||118|LOC_Os05g26400|protein_coding|CODING|LOC_Os05g26400.1|1|1) FN_789-2-1.SNP.5:15273153 chr05:015273153 0 W/15273153-15273153 FN_789-2-1 Single Base Substitution C-G HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN-74.SNP.5:15275535 chr05:015275535 0 W/15275535-15275535 FN-74 Single Base Substitution G-T INTRON HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2252-S.SNP.5:15277651 chr05:015277651 0 W/15277651-15277651 FN2252-S SNP G -> T AC=1;AN=190;BQB=0.871718;DP=5020;DP4=2548,2122,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199203;MQB=5.29395e-08;MQSB=0.721173;RPB=0.986344;SGB=32.5467;VDB=0.797687;EFF=UTR_3_PRIME(MODIFIER||5156||118|LOC_Os05g26359|protein_coding|CODING|LOC_Os05g26359.1|3|1),UTR_3_PRIME(MODIFIER||5156||118|LOC_Os05g26400|protein_coding|CODING|LOC_Os05g26400.1|3|1),INTRON(MODIFIER||||118|LOC_Os05g26250|protein_coding|CODING|LOC_Os05g26250.1|2|1),INTRON(MODIFIER||||300|LOC_Os05g26260|protein_coding|CODING|LOC_Os05g26260.1|2|1) FN2252-S.SNP.5:15277652 chr05:015277652 0 W/15277652-15277652 FN2252-S SNP A -> T AC=1;AN=190;BQB=0.333721;DP=5020;DP4=2500,2079,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.32753e-07;MQSB=0.719534;RPB=0.955001;SGB=32.5467;VDB=0.967406;EFF=UTR_3_PRIME(MODIFIER||5157||118|LOC_Os05g26359|protein_coding|CODING|LOC_Os05g26359.1|3|1),UTR_3_PRIME(MODIFIER||5157||118|LOC_Os05g26400|protein_coding|CODING|LOC_Os05g26400.1|3|1),INTRON(MODIFIER||||118|LOC_Os05g26250|protein_coding|CODING|LOC_Os05g26250.1|2|1),INTRON(MODIFIER||||300|LOC_Os05g26260|protein_coding|CODING|LOC_Os05g26260.1|2|1) FN2232-S.SNP.5:15278792 chr05:015278792 0 W/15278792-15278792 FN2232-S SNP C -> T AC=1;AN=190;BQB=0.503022;DP=4635;DP4=2501,1882,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0196332;MQB=0.00364496;MQSB=2.48406e-15;RPB=0.144428;SGB=-13.7759;VDB=0.210319;EFF=INTRON(MODIFIER||||300|LOC_Os05g26260|protein_coding|CODING|LOC_Os05g26260.1|1|1) FN474-S.SNP.5:15281078 chr05:015281078 0 W/15281078-15281078 FN474-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN972-S.SNP.5:15281455 chr05:015281455 0 W/15281455-15281455 FN972-S Single Base Substitution C-G INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2379.SNP.5:15296690 chr05:015296690 0 W/15296690-15296690 FN2379 SNP C -> T AC=1;AN=192;BQB=0.502367;DP=4458;DP4=1784,1969,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.105877;MQB=0.923272;MQSB=2.96563e-32;RPB=0.718458;SGB=34.0426;VDB=0.374321;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.5:15296715 chr05:015296715 0 W/15296715-15296715 FN718-S Single Base Substitution G-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1389-S.SNP.5:15300018 chr05:015300018 0 W/15300018-15300018 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN_552-1-1.SNP.5:15301377 chr05:015301377 0 W/15301377-15301377 FN_552-1-1 Single Base Substitution C-T HET LOC_Os05g26300 retrotransposon protein, putative, unclassified, expressed SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN2440.SNP.5:15301639 chr05:015301639 0 W/15301639-15301639 FN2440 SNP G -> A AC=1;AN=200;BQB=0.618479;DP=4385;DP4=2198,2008,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0013683;MQB=6.6677e-06;MQSB=0.934178;RPB=0.999072;SGB=49.6594;VDB=0.281616;EFF=INTRON(MODIFIER||||470|LOC_Os05g26300|protein_coding|CODING|LOC_Os05g26300.1|1|1) FN-314.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN-314 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-97.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN-97 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1366-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN1366-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1445-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN1445-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1745-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN1745-S SNP G -> A AC=2;AN=188;BQB=0.925361;DP=2804;DP4=1467,1281,15,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000356633;MQB=2.47978e-17;MQSB=0.901534;RPB=0.959443;SGB=71.8555;VDB=0.607098;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN2204-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN2204-S SNP G -> A AC=2;AN=190;BQB=0.858434;DP=5034;DP4=2384,2357,21,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198649;MQB=1.1036e-27;MQSB=0.211707;RPB=0.368223;SGB=130.923;VDB=0.692316;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN2457.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN2457 SNP G -> A AC=1;AN=200;BQB=0.682989;DP=4713;DP4=2212,2298,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212179;MQB=7.35861e-06;MQSB=0.45894;RPB=0.986798;SGB=54.2646;VDB=0.635306;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN2739-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.992;DP=4863;DP4=2282,2345,20,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205634;MQB=6.44406e-19;MQSB=0.834072;RPB=0.707173;SGB=84.1935;VDB=0.825284;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN3477-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN3477-S SNP G -> A AC=2;AN=184;BQB=0.873118;DP=2787;DP4=1372,1320,16,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000358809;MQB=2.75602e-21;MQSB=0.68594;RPB=0.970489;SGB=123.793;VDB=0.61712;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN4224-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.999406;DP=2521;DP4=1229,1225,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000396668;MQB=2.38352e-08;MQSB=0.753849;RPB=0.509213;SGB=45.206;VDB=0.217281;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S159|410|LOC_Os05g26310|protein_coding|CODING|LOC_Os05g26310.1|3|1) FN520-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN520-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN864-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN864-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN944-S.SNP.5:15305393 chr05:015305393 0 W/15305393-15305393 FN944-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1550-S.SNP.5:15309631 chr05:015309631 0 W/15309631-15309631 FN1550-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g26320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN3437-S.SNP.5:15314376 chr05:015314376 0 W/15314376-15314376 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.976885;DP=2605;DP4=1104,1261,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000767754;MQB=0.037204;MQSB=0.0872531;RPB=0.126245;SGB=25.1826;VDB=0.0207625;EFF=INTRON(MODIFIER||||1499|LOC_Os05g26320|protein_coding|CODING|LOC_Os05g26320.1|1|1) FN2595-S.SNP.5:15315121 chr05:015315121 0 W/15315121-15315121 FN2595-S SNP C -> T AC=1;AN=186;BQB=0.881625;DP=3236;DP4=1367,1639,8,11;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0.00648949;MQB=6.38328e-08;MQSB=0.0355904;RPB=0.606056;SGB=58.1246;VDB=0.185705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.5:15322913 chr05:015322913 0 W/15322913-15322913 FN2102-S SNP G -> C AC=1;AN=166;BQB=0.623963;DP=3286;DP4=1517,1741,4,6;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=7.41585e-07;MQSB=0.99414;RPB=0.901804;SGB=24.4556;VDB=0.778152;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H318Q|345|LOC_Os05g26340|protein_coding|CODING|LOC_Os05g26340.1|5|1) FN2246-S.SNP.5:15327892 chr05:015327892 0 W/15327892-15327892 FN2246-S SNP G -> T AC=1;AN=190;BQB=0.00310934;DP=3668;DP4=1795,1238,45,32;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.04253;MQB=2.83261e-18;MQSB=3.61166e-05;RPB=0.105132;SGB=-1067.64;VDB=1.01585e-08;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.5:15329812 chr05:015329812 0 W/15329812-15329812 FN2357 SNP G -> C AC=1;AN=192;BQB=0.858255;DP=5372;DP4=2060,3022,6,20;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.102197;MQB=0.705571;MQSB=0;RPB=0.681488;SGB=82.5522;VDB=0.90251;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.5:15330089 chr05:015330089 0 W/15330089-15330089 FN_N1-130-1 Single Base Substitution A-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2493.SNP.5:15330122 chr05:015330122 0 W/15330122-15330122 FN2493 SNP G -> C AC=1;AN=200;BQB=0.913295;DP=5395;DP4=3193,1955,14,9;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.123448;MQB=0.813967;MQSB=0;RPB=0.838292;SGB=17.5158;VDB=0.542487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.5:15345185 chr05:015345185 0 W/15345185-15345185 FN2697-S SNP A -> T AC=1;AN=200;BQB=0.371676;DP=4801;DP4=2256,2304,10,9;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.124141;MQB=0.958586;MQSB=0;RPB=0.925835;SGB=-36.1052;VDB=0.0978724;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.5:15350868 chr05:015350868 0 W/15350868-15350868 FN443-S Single Base Substitution C-A INTRON HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN4241-S.SNP.5:15351022 chr05:015351022 0 W/15351022-15351022 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.949514;DP=2038;DP4=1203,777,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.104514;MQB=0.887967;MQSB=4.05785e-34;RPB=0.86752;SGB=56.7575;VDB=0.0469434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1070S|1334|LOC_Os05g26410|protein_coding|CODING|LOC_Os05g26410.1|5|1),SPLICE_SITE_REGION(LOW||||1334|LOC_Os05g26410|protein_coding|CODING|LOC_Os05g26410.1|5|1) FN4249-S.SNP.5:15353835 chr05:015353835 0 W/15353835-15353835 FN4249-S SNP G -> T AC=1;AN=170;BQB=0.906932;DP=2642;DP4=1342,1256,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000757002;MQB=7.91962e-05;MQSB=0.208601;RPB=0.92826;SGB=43.4296;VDB=0.832737;EFF=INTRON(MODIFIER||||1334|LOC_Os05g26410|protein_coding|CODING|LOC_Os05g26410.1|2|1) FN2784-S.SNP.5:15358663 chr05:015358663 0 W/15358663-15358663 FN2784-S SNP G -> T AC=1;AN=198;BQB=0.281632;DP=4503;DP4=2280,1940,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.105929;MQB=0.989343;MQSB=0;RPB=0.864478;SGB=37.1297;VDB=0.371954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.5:15359138 chr05:015359138 0 W/15359138-15359138 FN3628-S SNP A -> G AC=2;AN=190;BQB=0.971057;DP=1375;DP4=539,661,13,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00218182;MQB=9.18911e-07;MQSB=0.010869;RPB=0.755907;SGB=50.3438;VDB=0.524653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.5:15363268 chr05:015363268 0 W/15363268-15363268 FN2102-S SNP C -> G AC=1;AN=166;BQB=0.0766609;DP=2859;DP4=1177,1642,9,15;HOB=7.25795e-05;ICB=0.000146033;MQ=46;MQ0F=0.0143407;MQB=0.000662402;MQSB=0.000246271;RPB=0.554672;SGB=-126.487;VDB=0.0123292;EFF=INTRON(MODIFIER||||1092|LOC_Os05g26420|protein_coding|CODING|LOC_Os05g26420.1|1|1) FN769-S.SNP.5:15366083 chr05:015366083 0 W/15366083-15366083 FN769-S Single Base Substitution C-T INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3662-S.SNP.5:15367160 chr05:015367160 0 W/15367160-15367160 FN3662-S SNP G -> C AC=1;AN=190;BQB=0.973189;DP=2577;DP4=1308,1184,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.38892e-05;MQSB=0.980011;RPB=0.166817;SGB=49.0954;VDB=0.0481833;EFF=INTRON(MODIFIER||||393|LOC_Os05g26430|protein_coding|CODING|LOC_Os05g26430.1|4|1) FN4189-S.SNP.5:15368861 chr05:015368861 0 W/15368861-15368861 FN4189-S SNP A -> T AC=2;AN=170;BQB=0.819512;DP=2726;DP4=1058,1560,8,17;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.0121056;MQB=7.28976e-09;MQSB=4.20038e-05;RPB=0.796528;SGB=46.7531;VDB=0.470454;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P62|393|LOC_Os05g26430|protein_coding|CODING|LOC_Os05g26430.1|2|1) FN1522-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN1522-S Single Base Substitution C-T INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN2332.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN2332 SNP C -> T AC=2;AN=192;BQB=0.697332;DP=4775;DP4=2269,2128,23,35;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000418848;MQB=1.70826e-24;MQSB=0.14317;RPB=0.733061;SGB=134.052;VDB=0.099128;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN3374-S SNP C -> T AC=1;AN=184;BQB=0.984252;DP=3161;DP4=1319,1748,8,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=7.53717e-11;MQSB=0.707509;RPB=0.472592;SGB=70.9657;VDB=0.723423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.99995;DP=3026;DP4=1309,1640,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.05467e-07;MQSB=0.385039;RPB=0.969992;SGB=66.8296;VDB=0.0631518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN3532-S SNP C -> T AC=1;AN=188;BQB=0.918227;DP=2991;DP4=1310,1619,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.758e-10;MQSB=0.252271;RPB=0.586378;SGB=89.8686;VDB=0.869865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN3831-S SNP C -> T AC=2;AN=190;BQB=0.962423;DP=2809;DP4=1250,1461,7,17;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.39348e-11;MQSB=0.805424;RPB=0.998706;SGB=103.742;VDB=0.439861;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN4075-S SNP C -> T AC=2;AN=182;BQB=0.99192;DP=3014;DP4=1389,1550,9,22;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=7.02383e-13;MQSB=0.932241;RPB=0.975448;SGB=134.329;VDB=0.585949;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.732861;DP=2571;DP4=1210,1299,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=5.82073e-07;MQSB=0.813004;RPB=0.987388;SGB=78.9707;VDB=0.969396;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.5:15370221 chr05:015370221 0 W/15370221-15370221 FN851-S Single Base Substitution C-T INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2267-S.SNP.5:15371053 chr05:015371053 0 W/15371053-15371053 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.980705;DP=2177;DP4=846,1107,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0142398;MQB=0.00129793;MQSB=0.0192883;RPB=0.935317;SGB=18.3316;VDB=0.872762;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.5:15371667 chr05:015371667 0 W/15371667-15371667 FN541-S Single Base Substitution G-A INTERGENIC HOMO SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN915-S.SNP.5:15374966 chr05:015374966 0 W/15374966-15374966 FN915-S Single Base Substitution G-A INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2432.SNP.5:15375288 chr05:015375288 0 W/15375288-15375288 FN2432 SNP T -> C AC=2;AN=200;BQB=0.0420357;DP=2816;DP4=1278,687,26,11;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0.0894886;MQB=0.817204;MQSB=0;RPB=0.755607;SGB=-178.697;VDB=0.0043951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.5:15377999 chr05:015377999 0 W/15377999-15377999 FN2650-S SNP A -> G AC=2;AN=200;BQB=0.252957;DP=5025;DP4=2515,2240,24,14;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0135323;MQB=0.0428057;MQSB=5.79617e-21;RPB=0.940459;SGB=126.794;VDB=0.403633;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.5:15379784 chr05:015379784 0 W/15379784-15379784 FN224-S Single Base Substitution G-T INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN3358-S.SNP.5:15381905 chr05:015381905 0 W/15381905-15381905 FN3358-S SNP C -> A AC=1;AN=184;BQB=0.877972;DP=3222;DP4=1483,1630,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0589696;MQB=0.901352;MQSB=1.4987e-20;RPB=0.99787;SGB=44.2207;VDB=0.360212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.5:15383830 chr05:015383830 0 W/15383830-15383830 FN3528-S SNP A -> C AC=2;AN=188;BQB=0.993645;DP=3086;DP4=1437,1502,16,17;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0155541;MQB=0.0165183;MQSB=0.82316;RPB=0.823225;SGB=144.388;VDB=0.892299;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.5:15383830 chr05:015383830 0 W/15383830-15383830 FN4229-S SNP A -> C AC=2;AN=170;BQB=0.903284;DP=2657;DP4=1236,1291,15,13;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0146782;MQB=0.00116304;MQSB=0.606058;RPB=0.749738;SGB=86.5178;VDB=0.168124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.5:15383864 chr05:015383864 0 W/15383864-15383864 FN3464-S SNP A -> T AC=2;AN=184;BQB=0.753828;DP=3181;DP4=1479,1562,12,17;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0232631;MQB=0.000245081;MQSB=1.66492e-05;RPB=0.607704;SGB=125.613;VDB=0.934539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1496-S.SNP.5:15387078 chr05:015387078 0 W/15387078-15387078 FN1496-S Single Base Substitution C-T INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1229-S.SNP.5:15390458 chr05:015390458 0 W/15390458-15390458 FN1229-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3802-S.SNP.5:15394575 chr05:015394575 0 W/15394575-15394575 FN3802-S SNP T -> A AC=1;AN=190;BQB=0.987494;DP=1960;DP4=1436,470,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.131633;MQB=0.976318;MQSB=0;RPB=0.87896;SGB=62.7569;VDB=0.957472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I63F|1388|LOC_Os05g26470|protein_coding|CODING|LOC_Os05g26470.1|3|1) FN573-S.SNP.5:15397735 chr05:015397735 0 W/15397735-15397735 FN573-S Single Base Substitution C-T INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2795-S.SNP.5:15400605 chr05:015400605 0 W/15400605-15400605 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.974471;DP=6131;DP4=4101,1811,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=26;MQ0F=0.106508;MQB=0.281099;MQSB=0;RPB=0.904004;SGB=32.9588;VDB=0.955982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.5:15409770 chr05:015409770 0 W/15409770-15409770 FN3871-S SNP C -> T AC=1;AN=158;BQB=0.918076;DP=2507;DP4=1009,1394,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0714001;MQB=0.986579;MQSB=0.000373111;RPB=0.876819;SGB=55.806;VDB=0.847865;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A185|217|LOC_Os05g26510|protein_coding|CODING|LOC_Os05g26510.1|1|1) FN1741-S.SNP.5:15415795 chr05:015415795 0 W/15415795-15415795 FN1741-S SNP T -> G AC=1;AN=188;BQB=0.748801;DP=2289;DP4=1086,1155,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000108532;MQSB=0.347978;RPB=0.993881;SGB=21.8113;VDB=0.95458;EFF=INTRON(MODIFIER||||183|LOC_Os05g26530|protein_coding|CODING|LOC_Os05g26530.1|1|1) FN2602-S.SNP.5:15416507 chr05:015416507 0 W/15416507-15416507 FN2602-S SNP T -> C AC=2;AN=186;BQB=0.753832;DP=3298;DP4=1573,1487,14,8;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.21444e-12;MQSB=0.974658;RPB=0.658799;SGB=15.7299;VDB=0.0435849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L182P|183|LOC_Os05g26530|protein_coding|CODING|LOC_Os05g26530.1|2|1) FN846-S.SNP.5:15419405 chr05:015419405 0 W/15419405-15419405 FN846-S Single Base Substitution G-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1697-S.SNP.5:15419560 chr05:015419560 0 W/15419560-15419560 FN1697-S SNP C -> G AC=1;AN=188;BQB=0.02165;DP=3111;DP4=1984,1102,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.252009;MQB=0.369258;MQSB=4.95804e-29;RPB=0.499189;SGB=-13.9132;VDB=0.754023;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.5:15422733 chr05:015422733 0 W/15422733-15422733 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.633666;DP=4048;DP4=2079,1830,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.224308;MQB=0.999681;MQSB=0;RPB=0.997884;SGB=38.4058;VDB=0.619938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.5:15423692 chr05:015423692 0 W/15423692-15423692 FN3548-S SNP C -> T AC=1;AN=188;BQB=0.231311;DP=2153;DP4=913,915,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0125406;MQB=0.263394;MQSB=2.54401e-15;RPB=0.91384;SGB=10.8165;VDB=0.154586;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G86|404|LOC_Os05g26550|protein_coding|CODING|LOC_Os05g26550.1|1|1) FN1032-S.SNP.5:15424527 chr05:015424527 0 W/15424527-15424527 FN1032-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g26550 retrotransposon protein, putative, unclassified SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3692-S.SNP.5:15426716 chr05:015426716 0 W/15426716-15426716 FN3692-S SNP G -> C AC=1;AN=190;BQB=0.97043;DP=4308;DP4=2461,1698,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.315924;MQB=0.289103;MQSB=1.26242e-17;RPB=0.307524;SGB=71.8647;VDB=0.211994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.5:15431205 chr05:015431205 0 W/15431205-15431205 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.689284;DP=3319;DP4=1724,1458,10,51;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0129557;MQB=5.17705e-32;MQSB=0.0125721;RPB=0.699436;SGB=-1114.49;VDB=1.86078e-12;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.5:15435342 chr05:015435342 0 W/15435342-15435342 FN1217-S Single Base Substitution C-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN-164.SNP.5:15436276 chr05:015436276 0 W/15436276-15436276 FN-164 Single Base Substitution G-C INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1026-S.SNP.5:15442838 chr05:015442838 0 W/15442838-15442838 FN1026-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g26580 retrotransposon protein, putative, unclassified, expressed SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1026-S.SNP.5:15442839 chr05:015442839 0 W/15442839-15442839 FN1026-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g26580 retrotransposon protein, putative, unclassified, expressed SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1455-S.SNP.5:15449436 chr05:015449436 0 W/15449436-15449436 FN1455-S Single Base Substitution C-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3889-S.SNP.5:15450988 chr05:015450988 0 W/15450988-15450988 FN3889-S SNP A -> G AC=1;AN=158;BQB=0.949295;DP=2510;DP4=1213,1206,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0505976;MQB=0.71007;MQSB=0.00123541;RPB=0.788689;SGB=23.9652;VDB=0.906563;EFF=INTRON(MODIFIER||||731|LOC_Os05g26600|protein_coding|CODING|LOC_Os05g26600.1|1|1) FN-178.SNP.5:15455260 chr05:015455260 0 W/15455260-15455260 FN-178 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g26600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3902-S.SNP.5:15456420 chr05:015456420 0 W/15456420-15456420 FN3902-S SNP G -> T AC=2;AN=158;BQB=0.199038;DP=2584;DP4=1335,1150,18,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000773994;MQB=1.40438e-09;MQSB=0.995958;RPB=0.374348;SGB=121.348;VDB=0.651486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q603H|731|LOC_Os05g26600|protein_coding|CODING|LOC_Os05g26600.1|6|1) FN3437-S.SNP.5:15456688 chr05:015456688 0 W/15456688-15456688 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.776625;DP=3118;DP4=1412,1632,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000641437;MQB=5.97747e-07;MQSB=0.721351;RPB=0.47652;SGB=18.2315;VDB=0.963248;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q693*|731|LOC_Os05g26600|protein_coding|CODING|LOC_Os05g26600.1|6|1) FN395-S.SNP.5:15461838 chr05:015461838 0 W/15461838-15461838 FN395-S Single Base Substitution G-A INTERGENIC HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2655-S.SNP.5:15462609 chr05:015462609 0 W/15462609-15462609 FN2655-S SNP C -> A AC=1;AN=200;BQB=0.902113;DP=4081;DP4=1764,2046,9,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.82541e-13;MQSB=0.973364;RPB=0.450033;SGB=127.947;VDB=0.827378;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.5:15463516 chr05:015463516 0 W/15463516-15463516 W450-6-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2415.SNP.5:15468356 chr05:015468356 0 W/15468356-15468356 FN2415 SNP C -> T AC=1;AN=200;BQB=0.556537;DP=4887;DP4=2377,2262,8,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54883e-16;MQSB=0.961257;RPB=0.997858;SGB=52.9314;VDB=0.457058;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.5:15470498 chr05:015470498 0 W/15470498-15470498 FN508-S Single Base Substitution A-G INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN1047-S.SNP.5:15483154 chr05:015483154 0 W/15483154-15483154 FN1047-S Single Base Substitution T-A INTRON HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2593-S.SNP.5:15488327 chr05:015488327 0 W/15488327-15488327 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.946192;DP=4010;DP4=1926,1857,19,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.24974e-21;MQSB=0.980531;RPB=0.529099;SGB=115.647;VDB=0.467833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.5:15488729 chr05:015488729 0 W/15488729-15488729 FN2150-S SNP C -> G AC=1;AN=168;BQB=0.932938;DP=3262;DP4=1720,1487,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57319e-13;MQSB=0.997955;RPB=0.854996;SGB=69.0561;VDB=0.725138;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.5:15491106 chr05:015491106 0 W/15491106-15491106 FN1525-S Single Base Substitution A-G INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN-93.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN-93 Single Base Substitution G-A INTRON HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2108-S.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN2108-S SNP G -> A AC=2;AN=168;BQB=0.253171;DP=3226;DP4=1584,1602,21,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.15928e-12;MQSB=0.997944;RPB=0.973035;SGB=-44.0584;VDB=0.826137;EFF=INTRON(MODIFIER||||301|LOC_Os05g26680|protein_coding|CODING|LOC_Os05g26680.1|1|1) FN2493.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN2493 SNP G -> A AC=2;AN=200;BQB=0.148669;DP=4257;DP4=1864,2178,24,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.92252e-17;MQSB=0.883896;RPB=0.315291;SGB=71.1676;VDB=0.991214;EFF=INTRON(MODIFIER||||301|LOC_Os05g26680|protein_coding|CODING|LOC_Os05g26680.1|1|1) FN2688-S.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN2688-S SNP G -> A AC=2;AN=200;BQB=0.17237;DP=4821;DP4=2132,2424,13,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.58028e-14;MQSB=0.999998;RPB=0.253617;SGB=83.5316;VDB=0.772682;EFF=INTRON(MODIFIER||||301|LOC_Os05g26680|protein_coding|CODING|LOC_Os05g26680.1|1|1) FN3854-S.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN3854-S SNP G -> A AC=2;AN=158;BQB=0.968945;DP=2294;DP4=1002,1204,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.95832e-13;MQSB=0.997685;RPB=0.961708;SGB=74.5068;VDB=0.450622;EFF=INTRON(MODIFIER||||301|LOC_Os05g26680|protein_coding|CODING|LOC_Os05g26680.1|1|1) FN4082-S.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN4082-S SNP G -> A AC=2;AN=182;BQB=0.958755;DP=2788;DP4=1246,1464,14,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.17391e-18;MQSB=0.992631;RPB=0.451101;SGB=143.35;VDB=0.374077;EFF=INTRON(MODIFIER||||301|LOC_Os05g26680|protein_coding|CODING|LOC_Os05g26680.1|1|1) FN781-S.SNP.5:15495404 chr05:015495404 0 W/15495404-15495404 FN781-S Single Base Substitution G-A INTRON HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2231-S.SNP.5:15506027 chr05:015506027 0 W/15506027-15506027 FN2231-S SNP T -> A AC=2;AN=190;BQB=0.759943;DP=4922;DP4=2325,2161,32,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15561e-22;MQSB=0.0283669;RPB=0.99323;SGB=5.60984;VDB=0.686332;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.5:15507381 chr05:015507381 0 W/15507381-15507381 FN3933-S SNP G -> T AC=2;AN=158;BQB=0.742357;DP=2510;DP4=1102,1304,10,17;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00119522;MQB=9.42101e-12;MQSB=0.220198;RPB=0.691077;SGB=112.609;VDB=0.569539;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.5:15507713 chr05:015507713 0 W/15507713-15507713 FN931-S Single Base Substitution G-T INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN515-S.SNP.5:15512509 chr05:015512509 0 W/15512509-15512509 FN515-S Single Base Substitution A-G INTERGENIC HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1060-S.SNP.5:15517336 chr05:015517336 0 W/15517336-15517336 FN1060-S Single Base Substitution G-A INTRON HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN-310.SNP.5:15530102 chr05:015530102 0 W/15530102-15530102 FN-310 Single Base Substitution G-T INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN2467.SNP.5:15539047 chr05:015539047 0 W/15539047-15539047 FN2467 SNP G -> C AC=1;AN=200;BQB=0.945837;DP=4111;DP4=1920,1885,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08854e-09;MQSB=0.512235;RPB=0.150985;SGB=34.6953;VDB=0.59239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G172A|411|LOC_Os05g26790|protein_coding|CODING|LOC_Os05g26790.1|2|1) FN2140-S.SNP.5:15542270 chr05:015542270 0 W/15542270-15542270 FN2140-S SNP T -> G AC=1;AN=168;BQB=0.818685;DP=1751;DP4=971,749,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000259784;MQSB=0.994385;RPB=0.248969;SGB=-0.101747;VDB=0.0676005;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.5:15547316 chr05:015547316 0 W/15547316-15547316 FN319-S Single Base Substitution G-A INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2375.SNP.5:15549002 chr05:015549002 0 W/15549002-15549002 FN2375 SNP G -> T AC=1;AN=192;BQB=0.943145;DP=4642;DP4=2350,2026,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=6.74467e-05;MQSB=0.952339;RPB=0.465536;SGB=29.087;VDB=0.0339896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A838E|1240|LOC_Os05g26810|protein_coding|CODING|LOC_Os05g26810.1|5|1) FN2630-S.SNP.5:15549114 chr05:015549114 0 W/15549114-15549114 FN2630-S SNP T -> C AC=2;AN=200;BQB=0.153968;DP=4514;DP4=2196,2081,33,28;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0307931;MQB=0.0683911;MQSB=0;RPB=0.92251;SGB=78.5122;VDB=0.359427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N801D|1240|LOC_Os05g26810|protein_coding|CODING|LOC_Os05g26810.1|5|1) FN3935-S.SNP.5:15554786 chr05:015554786 0 W/15554786-15554786 FN3935-S SNP G -> A AC=1;AN=158;BQB=0.899544;DP=2516;DP4=917,1356,13,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.7205e-15;MQSB=0.872108;RPB=0.494351;SGB=81.2457;VDB=0.186468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.5:15555782 chr05:015555782 0 W/15555782-15555782 FN3804-S SNP C -> A AC=1;AN=190;BQB=0.99225;DP=2744;DP4=1174,1455,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50281e-07;MQSB=0.947419;RPB=0.444271;SGB=39.9877;VDB=0.431287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.5:15559995 chr05:015559995 0 W/15559995-15559995 FN3940-S SNP G -> A AC=1;AN=158;BQB=0.554621;DP=2673;DP4=1309,1259,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.00833e-07;MQSB=0.914927;RPB=0.902436;SGB=55.806;VDB=0.338876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E385K|457|LOC_Os05g26820|protein_coding|CODING|LOC_Os05g26820.1|2|1) FN756-S.SNP.5:15561820 chr05:015561820 0 W/15561820-15561820 FN756-S Single Base Substitution T-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN3698-S.SNP.5:15577486 chr05:015577486 0 W/15577486-15577486 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.875627;DP=2486;DP4=1387,980,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37032e-08;MQSB=0.779121;RPB=0.574998;SGB=36.1006;VDB=0.112638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.5:15585340 chr05:015585340 0 W/15585340-15585340 FN2380 SNP G -> A AC=1;AN=192;BQB=0.821289;DP=5078;DP4=2559,2133,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.90047e-11;MQSB=0.860211;RPB=0.448405;SGB=36.607;VDB=0.761916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.5:15590564 chr05:015590564 0 W/15590564-15590564 FN3776-S SNP G -> C AC=1;AN=190;BQB=0.364966;DP=2721;DP4=1297,1279,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.66e-05;MQSB=0.81183;RPB=0.0845288;SGB=39.6545;VDB=0.214264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.5:15591972 chr05:015591972 0 W/15591972-15591972 FN2291 SNP A -> G AC=1;AN=192;BQB=0.814407;DP=4664;DP4=2203,2190,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.94851e-11;MQSB=0.416853;RPB=0.317239;SGB=54.0374;VDB=0.442372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.5:15595225 chr05:015595225 0 W/15595225-15595225 FN3951-S SNP G -> C AC=1;AN=168;BQB=0.981713;DP=2345;DP4=881,1345,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.56022e-08;MQSB=0.994015;RPB=0.775794;SGB=38.1788;VDB=0.0527968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN-158 Single Base Substitution G-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-290.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN-290 Single Base Substitution G-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2085-S.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN2085-S SNP G -> T AC=1;AN=168;BQB=0.00141645;DP=3491;DP4=1407,1676,71,30;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.88748e-09;MQSB=0.402117;RPB=0.219749;SGB=-1451.5;VDB=0.000103693;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN244-S Single Base Substitution G-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3534-S.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN3534-S SNP G -> T AC=1;AN=188;BQB=0.675412;DP=1916;DP4=885,665,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.44361e-08;MQSB=0.104431;RPB=0.653069;SGB=-13.3699;VDB=0.231713;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN418-S Single Base Substitution G-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.5:15602732 chr05:015602732 0 W/15602732-15602732 FN_1017-1 Single Base Substitution G-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-158.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN-158 Single Base Substitution T-G INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-290.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN-290 Single Base Substitution T-G INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2085-S.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN2085-S SNP T -> G AC=1;AN=168;BQB=1.58387e-07;DP=3470;DP4=1473,1698,32,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.1502e-15;MQSB=0.36379;RPB=0.851906;SGB=-698.736;VDB=0.00229244;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN244-S Single Base Substitution T-G INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3534-S.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN3534-S SNP T -> G AC=1;AN=188;BQB=0.966935;DP=1897;DP4=915,576,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.15441e-09;MQSB=0.463981;RPB=0.952358;SGB=26.0762;VDB=0.513551;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN418-S Single Base Substitution T-G INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.5:15602733 chr05:015602733 0 W/15602733-15602733 FN_1017-1 Single Base Substitution T-G HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-158.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN-158 Single Base Substitution G-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-290.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN-290 Single Base Substitution G-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2085-S.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN2085-S SNP G -> T AC=1;AN=168;BQB=0.00942379;DP=3500;DP4=1365,1711,36,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.56919e-14;MQSB=0.24805;RPB=0.910941;SGB=-705.559;VDB=0.000730838;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN244-S Single Base Substitution G-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3534-S.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN3534-S SNP G -> T AC=2;AN=188;BQB=0.409114;DP=1911;DP4=924,750,15,4;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=3.96142e-08;MQSB=0.00892043;RPB=0.340351;SGB=-13.3699;VDB=0.217283;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN418-S Single Base Substitution G-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.5:15602735 chr05:015602735 0 W/15602735-15602735 FN_1017-1 Single Base Substitution G-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2198-S.SNP.5:15604068 chr05:015604068 0 W/15604068-15604068 FN2198-S SNP A -> G AC=2;AN=190;BQB=0.968117;DP=5028;DP4=2695,1990,13,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198886;MQB=1.6014e-18;MQSB=0.736735;RPB=0.85078;SGB=149.281;VDB=0.63094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.5:15607292 chr05:015607292 0 W/15607292-15607292 FN2379 SNP C -> T AC=1;AN=192;BQB=0.313897;DP=4903;DP4=2264,2374,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00101978;MQB=6.92668e-11;MQSB=0.493582;RPB=0.68677;SGB=-11.3826;VDB=0.883783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.5:15651639 chr05:015651639 0 W/15651639-15651639 FN1602-S Single Base Substitution C-T INTERGENIC Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3341-S.SNP.5:15653334 chr05:015653334 0 W/15653334-15653334 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.643695;DP=2500;DP4=1015,1366,7,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.99227e-08;MQSB=0.00573527;RPB=0.966365;SGB=56.8786;VDB=0.212591;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.5:15658304 chr05:015658304 0 W/15658304-15658304 FN1060-S Single Base Substitution A-G INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1407-S.SNP.5:15664829 chr05:015664829 0 W/15664829-15664829 FN1407-S Single Base Substitution G-C INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1407-S.SNP.5:15664843 chr05:015664843 0 W/15664843-15664843 FN1407-S Single Base Substitution C-T INTERGENIC Homo SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN3990-S.SNP.5:15671102 chr05:015671102 0 W/15671102-15671102 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.726342;DP=2426;DP4=1242,1067,17,13;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0420445;MQB=0.504781;MQSB=0.00864508;RPB=0.450009;SGB=93.0718;VDB=0.380267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S173N|1411|LOC_Os05g26970|protein_coding|CODING|LOC_Os05g26970.1|1|1) FN1270-S.SNP.5:15677004 chr05:015677004 0 W/15677004-15677004 FN1270-S Single Base Substitution T-C INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN554-S.SNP.5:15685068 chr05:015685068 0 W/15685068-15685068 FN554-S Single Base Substitution C-T INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN521-S.SNP.5:15696575 chr05:015696575 0 W/15696575-15696575 FN521-S Single Base Substitution A-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN521-S.SNP.5:15696576 chr05:015696576 0 W/15696576-15696576 FN521-S Single Base Substitution G-C INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3373-S.SNP.5:15697565 chr05:015697565 0 W/15697565-15697565 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.956399;DP=3201;DP4=1737,1363,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.97711e-12;MQSB=0.987372;RPB=0.623546;SGB=33.3622;VDB=0.098987;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.5:15698803 chr05:015698803 0 W/15698803-15698803 FN4136-S SNP G -> T AC=1;AN=170;BQB=0.999501;DP=2358;DP4=1293,998,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.38753e-10;MQSB=0.932988;RPB=0.949504;SGB=74.528;VDB=0.6564;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L11|226|LOC_Os05g27000|protein_coding|CODING|LOC_Os05g27000.1|1|1) FN4094-S.SNP.5:15700655 chr05:015700655 0 W/15700655-15700655 FN4094-S SNP T -> C AC=1;AN=182;BQB=0.986309;DP=2580;DP4=1247,1288,4,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.54091e-05;MQSB=0.994921;RPB=0.990566;SGB=26.0691;VDB=0.664313;EFF=INTRON(MODIFIER||||226|LOC_Os05g27000|protein_coding|CODING|LOC_Os05g27000.1|1|1) FN-157.SNP.5:15700812 chr05:015700812 0 W/15700812-15700812 FN-157 Single Base Substitution T-C INTRON HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN1668-S.SNP.5:15700821 chr05:015700821 0 W/15700821-15700821 FN1668-S SNP T -> C AC=1;AN=188;BQB=0.764686;DP=3699;DP4=1892,1771,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.59391e-08;MQSB=0.967054;RPB=0.997576;SGB=10.1681;VDB=0.0662677;EFF=INTRON(MODIFIER||||226|LOC_Os05g27000|protein_coding|CODING|LOC_Os05g27000.1|1|1) W247-2-1.SNP.5:15705919 chr05:015705919 0 W/15705919-15705919 W247-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN759-S.SNP.5:15710448 chr05:015710448 0 W/15710448-15710448 FN759-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g27010 peptide transporter PTR3-A, putative, expressed SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1478-S.SNP.5:15711293 chr05:015711293 0 W/15711293-15711293 FN1478-S Single Base Substitution G-A INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3353-S.SNP.5:15718935 chr05:015718935 0 W/15718935-15718935 FN3353-S SNP T -> G AC=2;AN=184;BQB=0.744081;DP=2947;DP4=1290,1504,16,19;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00508992;MQB=5.14323e-09;MQSB=3.15104e-16;RPB=0.355686;SGB=152.744;VDB=0.667938;EFF=INTRON(MODIFIER||||872|LOC_Os05g27034|protein_coding|CODING|LOC_Os05g27034.1|1|1) FN1323-S.SNP.5:15725829 chr05:015725829 0 W/15725829-15725829 FN1323-S Single Base Substitution T-G INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1554-S.SNP.5:15725829 chr05:015725829 0 W/15725829-15725829 FN1554-S Single Base Substitution T-G INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1476-S.SNP.5:15726141 chr05:015726141 0 W/15726141-15726141 FN1476-S Single Base Substitution T-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-261.SNP.5:15727618 chr05:015727618 0 W/15727618-15727618 FN-261 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN460-S.SNP.5:15729675 chr05:015729675 0 W/15729675-15729675 FN460-S Single Base Substitution G-C INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN-45.SNP.5:15730419 chr05:015730419 0 W/15730419-15730419 FN-45 Single Base Substitution A-G INTERGENIC Homo SNo: 45, Mutant_ID: FN-45, Generation: M2, Mutations: 30, Genes: 47, Seed availability: Yes. FN3856-S.SNP.5:15734390 chr05:015734390 0 W/15734390-15734390 FN3856-S SNP T -> G AC=2;AN=158;BQB=0.872295;DP=2211;DP4=1075,1034,7,14;HOB=0.024996;ICB=0.493752;MQ=32;MQ0F=0.118951;MQB=0.781359;MQSB=2.47518e-05;RPB=0.702033;SGB=86.3921;VDB=0.674203;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caG|H512Q|1702|LOC_Os05g27060|protein_coding|CODING|LOC_Os05g27060.1|2|1) FN3709-S.SNP.5:15767181 chr05:015767181 0 W/15767181-15767181 FN3709-S SNP C -> T AC=1;AN=190;BQB=0.431286;DP=3013;DP4=1443,1394,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.47031e-06;MQSB=0.821685;RPB=0.429492;SGB=18.552;VDB=0.697825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.5:15771333 chr05:015771333 0 W/15771333-15771333 FN1573-S Single Base Substitution G-A INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1573-S.SNP.5:15771334 chr05:015771334 0 W/15771334-15771334 FN1573-S Single Base Substitution G-A INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN4041-S.SNP.5:15774385 chr05:015774385 0 W/15774385-15774385 FN4041-S SNP C -> T AC=1;AN=168;BQB=0.727132;DP=2700;DP4=1164,1366,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.70312e-05;MQSB=0.732087;RPB=0.153847;SGB=56.6036;VDB=0.37956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.5:15781389 chr05:015781389 0 W/15781389-15781389 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.93709;DP=4975;DP4=2390,2326,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.67725e-12;MQSB=0.989957;RPB=0.925262;SGB=69.1109;VDB=0.174914;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.5:15783074 chr05:015783074 0 W/15783074-15783074 FN4072-S SNP A -> G AC=1;AN=182;BQB=0.91308;DP=2605;DP4=1267,1246,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.64347e-07;MQSB=0.976063;RPB=0.410469;SGB=44.1115;VDB=0.756924;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.5:15785436 chr05:015785436 0 W/15785436-15785436 FN-76 Single Base Substitution A-G INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN891-S.SNP.5:15786623 chr05:015786623 0 W/15786623-15786623 FN891-S Single Base Substitution A-G INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN825-S.SNP.5:15788294 chr05:015788294 0 W/15788294-15788294 FN825-S Single Base Substitution T-A INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3533-S.SNP.5:15789744 chr05:015789744 0 W/15789744-15789744 FN3533-S SNP A -> C AC=1;AN=188;BQB=0.970414;DP=2568;DP4=1544,958,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0743769;MQB=0.482007;MQSB=1.24415e-34;RPB=0.834065;SGB=44.4357;VDB=0.999216;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L108|208|LOC_Os05g27130|protein_coding|CODING|LOC_Os05g27130.1|3|1) FN3848-S.SNP.5:15793231 chr05:015793231 0 W/15793231-15793231 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.98545;DP=2583;DP4=1182,1278,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00309717;MQB=0.000910279;MQSB=0.0409613;RPB=0.396802;SGB=33.9591;VDB=0.127239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R627M|814|LOC_Os05g27140|protein_coding|CODING|LOC_Os05g27140.1|7|1) FN-173.SNP.5:15796835 chr05:015796835 0 W/15796835-15796835 FN-173 Single Base Substitution C-T INTRON HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN565-S.SNP.5:15799292 chr05:015799292 0 W/15799292-15799292 FN565-S Single Base Substitution C-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN-77.SNP.5:15802620 chr05:015802620 0 W/15802620-15802620 FN-77 Single Base Substitution C-T INTRON HOMO SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN864-S.SNP.5:15808674 chr05:015808674 0 W/15808674-15808674 FN864-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g27170 retrotransposon, putative, centromere-specific, expressed SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN-381.SNP.5:15812041 chr05:015812041 0 W/15812041-15812041 FN-381 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g27180 ligA, putative, expressed SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN962-S.SNP.5:15817331 chr05:015817331 0 W/15817331-15817331 FN962-S Single Base Substitution T-A INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3573-S.SNP.5:15817608 chr05:015817608 0 W/15817608-15817608 FN3573-S SNP G -> C AC=1;AN=188;BQB=0.716973;DP=2775;DP4=1333,1349,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.32796e-09;MQSB=0.983945;RPB=0.980012;SGB=60.7873;VDB=0.488831;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.5:15818772 chr05:015818772 0 W/15818772-15818772 FN1097-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2281.SNP.5:15819833 chr05:015819833 0 W/15819833-15819833 FN2281 SNP C -> T AC=1;AN=192;BQB=0.639135;DP=4916;DP4=2283,2355,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.70517e-15;MQSB=0.587963;RPB=0.583027;SGB=22.9983;VDB=0.513427;EFF=INTRON(MODIFIER||||147|LOC_Os05g27200|protein_coding|CODING|LOC_Os05g27200.1|1|1) FN3356-S.SNP.5:15821420 chr05:015821420 0 W/15821420-15821420 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.860644;DP=3548;DP4=2055,1349,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000563698;MQB=6.63627e-09;MQSB=0.596379;RPB=0.968689;SGB=63.9222;VDB=0.0346997;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D16|147|LOC_Os05g27200|protein_coding|CODING|LOC_Os05g27200.1|1|1) FN2436.SNP.5:15822947 chr05:015822947 0 W/15822947-15822947 FN2436 SNP G -> C AC=1;AN=200;BQB=0.801225;DP=4234;DP4=2116,1904,14,5;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0413321;MQB=0.412982;MQSB=0.000121569;RPB=0.999283;SGB=81.8956;VDB=0.204296;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.5:15834877 chr05:015834877 0 W/15834877-15834877 FN541-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g27230 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1094-S.SNP.5:15838816 chr05:015838816 0 W/15838816-15838816 FN1094-S Single Base Substitution T-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3892-S.SNP.5:15839084 chr05:015839084 0 W/15839084-15839084 FN3892-S SNP A -> T AC=1;AN=158;BQB=0.944369;DP=2259;DP4=800,1328,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00177069;MQB=6.04844e-07;MQSB=0.810659;RPB=0.936009;SGB=21.4493;VDB=0.230248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.5:15842668 chr05:015842668 0 W/15842668-15842668 FN1233-S Single Base Substitution T-G INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3679-S.SNP.5:15845504 chr05:015845504 0 W/15845504-15845504 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.892211;DP=2877;DP4=1354,1424,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0145985;MQB=0.00077071;MQSB=8.54101e-05;RPB=0.999693;SGB=57.4238;VDB=0.561588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.5:15847286 chr05:015847286 0 W/15847286-15847286 FN3474-S SNP G -> T AC=1;AN=184;BQB=0.999851;DP=2495;DP4=1167,1249,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000400802;MQB=0.00010319;MQSB=5.83942e-07;RPB=0.627808;SGB=28.7043;VDB=0.922495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R114L|166|LOC_Os05g27250|protein_coding|CODING|LOC_Os05g27250.1|1|1) FN224-S.SNP.5:15851552 chr05:015851552 0 W/15851552-15851552 FN224-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g27260 retrotransposon protein, putative, unclassified SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1465-S.SNP.5:15859551 chr05:015859551 0 W/15859551-15859551 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3794-S.SNP.5:15862383 chr05:015862383 0 W/15862383-15862383 FN3794-S SNP C -> T AC=2;AN=190;BQB=0.969769;DP=2572;DP4=1246,1139,8,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16345e-09;MQSB=0.131294;RPB=0.738684;SGB=94.6341;VDB=0.387073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.5:15864189 chr05:015864189 0 W/15864189-15864189 FN2205-S SNP A -> G AC=2;AN=190;BQB=0.0944742;DP=3231;DP4=936,1975,6,24;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000619003;MQB=3.36054e-12;MQSB=2.43015e-17;RPB=0.423934;SGB=131.065;VDB=0.0725731;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.5:15866419 chr05:015866419 0 W/15866419-15866419 W721-2-1 Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN-162.SNP.5:15867441 chr05:015867441 0 W/15867441-15867441 FN-162 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g27304 peptide transporter PTR2, putative, expressed SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2465.SNP.5:15868357 chr05:015868357 0 W/15868357-15868357 FN2465 SNP T -> A AC=1;AN=200;BQB=0.986491;DP=4326;DP4=2274,1738,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28597e-15;MQSB=0.20121;RPB=0.729;SGB=55.5366;VDB=0.407293;EFF=INTRON(MODIFIER||||583|LOC_Os05g27304|protein_coding|CODING|LOC_Os05g27304.1|2|1) FN3926-S.SNP.5:15870975 chr05:015870975 0 W/15870975-15870975 FN3926-S SNP T -> C AC=1;AN=158;BQB=0.600616;DP=1971;DP4=1055,846,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.71178e-07;MQSB=0.387241;RPB=0.141038;SGB=47.5512;VDB=0.119256;EFF=INTRON(MODIFIER||||583|LOC_Os05g27304|protein_coding|CODING|LOC_Os05g27304.1|2|1) FN850-S.SNP.5:15875032 chr05:015875032 0 W/15875032-15875032 FN850-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g27320 VHS and GAT domain containing protein, expressed SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN2266-S.SNP.5:15884850 chr05:015884850 0 W/15884850-15884850 FN2266-S SNP T -> A AC=1;AN=190;BQB=0.708365;DP=3911;DP4=2316,1336,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.3985e-10;MQSB=0.610881;RPB=0.91395;SGB=28.7675;VDB=0.998738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.5:15898557 chr05:015898557 0 W/15898557-15898557 FN3375-S SNP C -> G AC=1;AN=184;BQB=0.939777;DP=2621;DP4=1120,1384,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0110645;MQB=0.00301806;MQSB=1.6238e-06;RPB=0.994386;SGB=44.2207;VDB=0.692875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.5:15901512 chr05:015901512 0 W/15901512-15901512 FN2460 SNP A -> G AC=1;AN=200;BQB=0.274171;DP=4872;DP4=2114,2482,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.57334e-09;MQSB=0.7706;RPB=0.998417;SGB=51.0851;VDB=0.779179;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.5:15905562 chr05:015905562 0 W/15905562-15905562 FN755-S Single Base Substitution C-T INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-338.SNP.5:15917465 chr05:015917465 0 W/15917465-15917465 FN-338 Single Base Substitution T-A INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN573-S.SNP.5:15918005 chr05:015918005 0 W/15918005-15918005 FN573-S Single Base Substitution A-T INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2415.SNP.5:15921740 chr05:015921740 0 W/15921740-15921740 FN2415 SNP C -> G AC=1;AN=200;BQB=0.968228;DP=4668;DP4=1945,2439,7,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0017138;MQB=2.80682e-12;MQSB=0.0257143;RPB=0.998813;SGB=19.1209;VDB=0.238872;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P217R|336|LOC_Os05g27390|protein_coding|CODING|LOC_Os05g27390.1|3|1) FN1638-S.SNP.5:15923167 chr05:015923167 0 W/15923167-15923167 FN1638-S Single Base Substitution G-T INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2417.SNP.5:15923313 chr05:015923313 0 W/15923313-15923313 FN2417 SNP C -> T AC=1;AN=200;BQB=0.18556;DP=4904;DP4=2472,2056,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89369e-08;MQSB=0.427422;RPB=0.93998;SGB=12.7003;VDB=0.952307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.5:15928032 chr05:015928032 0 W/15928032-15928032 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.826161;DP=3973;DP4=1913,1979,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0153536;MQB=6.78725e-07;MQSB=0.0922499;RPB=0.634797;SGB=20.7533;VDB=0.454779;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A133|1242|LOC_Os05g27400|protein_coding|CODING|LOC_Os05g27400.1|1|1) FN2082-S.SNP.5:15928649 chr05:015928649 0 W/15928649-15928649 FN2082-S SNP A -> G AC=1;AN=168;BQB=0.0450644;DP=2721;DP4=1625,1064,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0091878;MQB=0.429665;MQSB=0.00037848;RPB=0.403151;SGB=-37.2282;VDB=0.0752836;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.5:15929375 chr05:015929375 0 W/15929375-15929375 FN961-S Single Base Substitution G-C INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1411-S.SNP.5:15933325 chr05:015933325 0 W/15933325-15933325 FN1411-S Single Base Substitution T-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3733-S.SNP.5:15939986 chr05:015939986 0 W/15939986-15939986 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.991063;DP=2961;DP4=1243,1586,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.47366e-08;MQSB=0.990436;RPB=0.798219;SGB=23.6597;VDB=0.911024;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.5:15940373 chr05:015940373 0 W/15940373-15940373 FN3945-S SNP C -> T AC=2;AN=168;BQB=0.999962;DP=2691;DP4=1337,1243,6,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.00511e-10;MQSB=0.902327;RPB=0.991944;SGB=78.7577;VDB=0.467038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.5:15940860 chr05:015940860 0 W/15940860-15940860 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.986986;DP=2948;DP4=1403,1434,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12191e-05;MQSB=0.980343;RPB=0.47326;SGB=-3.65821;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.5:15945042 chr05:015945042 0 W/15945042-15945042 FN1192-S Single Base Substitution T-C INTRON HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN2611-S.SNP.5:15946648 chr05:015946648 0 W/15946648-15946648 FN2611-S SNP G -> T AC=1;AN=200;BQB=0.958465;DP=4811;DP4=2315,2188,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47551e-17;MQSB=0.760477;RPB=0.366178;SGB=-5.84819;VDB=0.835171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P93H|784|LOC_Os05g27430|protein_coding|CODING|LOC_Os05g27430.1|1|1) FN2356.SNP.5:15947076 chr05:015947076 0 W/15947076-15947076 FN2356 SNP C -> T AC=1;AN=192;BQB=0.887815;DP=4897;DP4=2268,2427,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04726e-08;MQSB=0.901313;RPB=0.999411;SGB=26.3496;VDB=0.208725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.5:15947729 chr05:015947729 0 W/15947729-15947729 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.470784;DP=4024;DP4=1949,1833,22,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.12448e-16;MQSB=0.313153;RPB=0.349288;SGB=78.6516;VDB=0.290915;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.5:15954542 chr05:015954542 0 W/15954542-15954542 FN447-S Single Base Substitution G-A INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN3326-S.SNP.5:15955750 chr05:015955750 0 W/15955750-15955750 FN3326-S SNP G -> C AC=2;AN=184;BQB=0.427467;DP=3393;DP4=1359,1720,7,13;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.000589449;MQB=0.000315683;MQSB=1.06691e-11;RPB=0.940049;SGB=35.884;VDB=0.537182;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.5:15955750 chr05:015955750 0 W/15955750-15955750 FN_949-1 Single Base Substitution G-C HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1631-S.SNP.5:15957230 chr05:015957230 0 W/15957230-15957230 FN1631-S Single Base Substitution C-T INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN934-S.SNP.5:15960416 chr05:015960416 0 W/15960416-15960416 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3861-S.SNP.5:15970410 chr05:015970410 0 W/15970410-15970410 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.948893;DP=2429;DP4=1112,1234,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0123508;MQB=1.66406e-05;MQSB=0.145831;RPB=0.690403;SGB=14.3409;VDB=0.915024;EFF=INTRON(MODIFIER||||100|LOC_Os05g27460|protein_coding|CODING|LOC_Os05g27460.1|1|1) FN3435-S.SNP.5:15978622 chr05:015978622 0 W/15978622-15978622 FN3435-S SNP A -> T AC=1;AN=184;BQB=0.947364;DP=2881;DP4=1483,1306,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.92982e-05;MQSB=0.979966;RPB=0.5847;SGB=26.1347;VDB=0.787989;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.5:15981727 chr05:015981727 0 W/15981727-15981727 W278-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN4096-S.SNP.5:15982193 chr05:015982193 0 W/15982193-15982193 FN4096-S SNP C -> T AC=1;AN=182;BQB=0.977362;DP=3253;DP4=1624,1534,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00922226;MQB=4.74542e-06;MQSB=0.781414;RPB=0.407955;SGB=23.1441;VDB=0.760953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.5:15984961 chr05:015984961 0 W/15984961-15984961 FN2749-S SNP G -> T AC=2;AN=200;BQB=0.508641;DP=5197;DP4=2383,2512,15,13;HOB=0.0198;ICB=0.495051;MQ=21;MQ0F=0.323263;MQB=0.487899;MQSB=0;RPB=0.41673;SGB=58.1418;VDB=0.690525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.5:15990453 chr05:015990453 0 W/15990453-15990453 FN3312-S SNP G -> T AC=1;AN=184;BQB=0.391111;DP=2669;DP4=1341,1093,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78727e-09;MQSB=0.984019;RPB=0.576695;SGB=43.4494;VDB=0.370368;EFF=INTRON(MODIFIER||||809|LOC_Os05g27490|protein_coding|CODING|LOC_Os05g27490.1|8|1) FN2467.SNP.5:15996237 chr05:015996237 0 W/15996237-15996237 FN2467 SNP G -> C AC=1;AN=198;BQB=0.447525;DP=4671;DP4=2200,2092,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000214087;MQB=1.20082e-11;MQSB=0.75152;RPB=0.139897;SGB=-8.26887;VDB=0.641738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E70Q|347|LOC_Os05g27500|protein_coding|CODING|LOC_Os05g27500.1|3|1) FN-386.SNP.5:16001062 chr05:016001062 0 W/16001062-16001062 FN-386 Single Base Substitution A-G INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3541-S.SNP.5:16004355 chr05:016004355 0 W/16004355-16004355 FN3541-S SNP G -> T AC=1;AN=188;BQB=0.853036;DP=2830;DP4=1309,1458,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.41538e-09;MQSB=0.905569;RPB=0.93564;SGB=46.6141;VDB=0.930432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.5:16006237 chr05:016006237 0 W/16006237-16006237 FN3404-S SNP G -> A AC=2;AN=184;BQB=0.996222;DP=2773;DP4=1503,1161,11,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.87573e-09;MQSB=0.947056;RPB=0.978855;SGB=46.3132;VDB=0.101526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.5:16008844 chr05:016008844 0 W/16008844-16008844 FN1679-S SNP G -> A AC=2;AN=188;BQB=0.913332;DP=3773;DP4=1813,1900,19,27;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.15876;MQB=0.821325;MQSB=0;RPB=0.816549;SGB=-99.7768;VDB=0.0655673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P100L|171|LOC_Os05g27520|protein_coding|CODING|LOC_Os05g27520.2|7|1),INTRON(MODIFIER||||166|LOC_Os05g27520|protein_coding|CODING|LOC_Os05g27520.1|5|1) FN3916-S.SNP.5:16009713 chr05:016009713 0 W/16009713-16009713 FN3916-S SNP G -> C AC=1;AN=158;BQB=0.990982;DP=2323;DP4=1222,1012,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.115799;MQB=0.71433;MQSB=0;RPB=0.514333;SGB=20.5959;VDB=0.474469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A7G|166|LOC_Os05g27520|protein_coding|CODING|LOC_Os05g27520.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A56G|171|LOC_Os05g27520|protein_coding|CODING|LOC_Os05g27520.2|5|1) FN563-S.SNP.5:16011894 chr05:016011894 0 W/16011894-16011894 FN563-S Single Base Substitution C-A INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3791-S.SNP.5:16014898 chr05:016014898 0 W/16014898-16014898 FN3791-S SNP G -> T AC=2;AN=190;BQB=0.262595;DP=1952;DP4=1254,492,11,5;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.000130076;MQSB=1.96392e-08;RPB=0.336389;SGB=46.7622;VDB=0.325278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.5:16015816 chr05:016015816 0 W/16015816-16015816 FN2534-S SNP T -> G AC=1;AN=198;BQB=0.986345;DP=4025;DP4=1716,2072,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.86468e-06;MQSB=0.964787;RPB=0.860526;SGB=1.37381;VDB=0.423217;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.5:16016140 chr05:016016140 0 W/16016140-16016140 FN3308-S SNP G -> C AC=2;AN=184;BQB=0.618696;DP=2736;DP4=1373,1232,24,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12869e-18;MQSB=0.963569;RPB=0.337865;SGB=102.712;VDB=0.314219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.5:16022350 chr05:016022350 0 W/16022350-16022350 FN3846-S SNP A -> T AC=1;AN=190;BQB=0.953733;DP=2734;DP4=1416,1237,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.62573e-07;MQSB=0.906259;RPB=0.683417;SGB=10.8904;VDB=0.594064;EFF=INTRON(MODIFIER||||212|LOC_Os05g27530|protein_coding|CODING|LOC_Os05g27530.1|1|1),INTRON(MODIFIER||||192|LOC_Os05g27530|protein_coding|CODING|LOC_Os05g27530.2|1|1) FN1282-S.SNP.5:16024197 chr05:016024197 0 W/16024197-16024197 FN1282-S Single Base Substitution C-T INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3480-S.SNP.5:16043059 chr05:016043059 0 W/16043059-16043059 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.973178;DP=2886;DP4=1392,1390,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.09365e-14;MQSB=0.818119;RPB=0.89006;SGB=67.4439;VDB=0.699757;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.5:16046777 chr05:016046777 0 W/16046777-16046777 FN276-S Single Base Substitution T-C INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1233-S.SNP.5:16049004 chr05:016049004 0 W/16049004-16049004 FN1233-S Single Base Substitution A-T INTRON HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN2630-S.SNP.5:16056143 chr05:016056143 0 W/16056143-16056143 FN2630-S SNP G -> A AC=2;AN=200;BQB=0.732731;DP=4703;DP4=2253,2191,13,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.65433e-21;MQSB=0.754437;RPB=0.949607;SGB=150.973;VDB=0.403755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2090-S.SNP.5:16056849 chr05:016056849 0 W/16056849-16056849 FN2090-S SNP C -> A AC=1;AN=168;BQB=0.719289;DP=3632;DP4=1892,1650,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.81949e-09;MQSB=0.962309;RPB=0.818312;SGB=27.0464;VDB=0.968047;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.5:16057517 chr05:016057517 0 W/16057517-16057517 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.984869;DP=2416;DP4=1298,1032,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.04511e-08;MQSB=0.999509;RPB=0.695668;SGB=47.8722;VDB=0.376267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.5:16072494 chr05:016072494 0 W/16072494-16072494 FN1198-S Single Base Substitution G-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN2559-S.SNP.5:16078458 chr05:016078458 0 W/16078458-16078458 FN2559-S SNP T -> C AC=1;AN=198;BQB=0.699424;DP=4234;DP4=1912,2134,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000223217;MQSB=0.999934;RPB=0.99963;SGB=18.5788;VDB=0.263557;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.5:16079678 chr05:016079678 0 W/16079678-16079678 FN1521-S Single Base Substitution C-A INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1547-S.SNP.5:16083960 chr05:016083960 0 W/16083960-16083960 FN1547-S Single Base Substitution G-A INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. W554-1-1.SNP.5:16088039 chr05:016088039 0 W/16088039-16088039 W554-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2795-S.SNP.5:16088362 chr05:016088362 0 W/16088362-16088362 FN2795-S SNP T -> C AC=2;AN=198;BQB=0.59031;DP=3855;DP4=1784,1838,22,25;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=1.40007e-08;MQSB=0.911812;RPB=0.990566;SGB=158.788;VDB=0.719437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.5:16088682 chr05:016088682 0 W/16088682-16088682 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.903967;DP=3844;DP4=1549,2116,2,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.11302e-08;MQSB=0.884814;RPB=0.370418;SGB=40.149;VDB=0.897932;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.5:16090513 chr05:016090513 0 W/16090513-16090513 FN684-S Single Base Substitution T-C INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1395-S.SNP.5:16098622 chr05:016098622 0 W/16098622-16098622 FN1395-S Single Base Substitution T-A INTRON HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN2774-S.SNP.5:16108371 chr05:016108371 0 W/16108371-16108371 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.527505;DP=3671;DP4=1887,1596,10,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.06992e-11;MQSB=0.256745;RPB=0.867237;SGB=47.5102;VDB=0.241805;EFF=INTRON(MODIFIER||||103|LOC_Os05g27660|protein_coding|CODING|LOC_Os05g27660.1|1|1) FN461-S.SNP.5:16112108 chr05:016112108 0 W/16112108-16112108 FN461-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3421-S.SNP.5:16116140 chr05:016116140 0 W/16116140-16116140 FN3421-S SNP C -> A AC=1;AN=184;BQB=0.576832;DP=3151;DP4=1251,1722,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00031736;MQB=5.48951e-08;MQSB=0.925057;RPB=0.568917;SGB=-17.3229;VDB=0.641244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.5:16116853 chr05:016116853 0 W/16116853-16116853 FN-102 Single Base Substitution C-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3791-S.SNP.5:16119810 chr05:016119810 0 W/16119810-16119810 FN3791-S SNP A -> T AC=2;AN=190;BQB=0.804709;DP=3013;DP4=1335,1608,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.33311e-13;MQSB=0.979035;RPB=0.99402;SGB=38.983;VDB=0.359553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.5:16121585 chr05:016121585 0 W/16121585-16121585 FN3547-S SNP T -> A AC=1;AN=188;BQB=0.94634;DP=2676;DP4=1281,1330,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.13368e-07;MQSB=0.948415;RPB=0.92982;SGB=35.9843;VDB=0.198994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.5:16122380 chr05:016122380 0 W/16122380-16122380 FN1400-S Single Base Substitution C-A INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN-274.SNP.5:16133376 chr05:016133376 0 W/16133376-16133376 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-274.SNP.5:16133377 chr05:016133377 0 W/16133377-16133377 FN-274 Single Base Substitution C-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-228.SNP.5:16143458 chr05:016143458 0 W/16143458-16143458 FN-228 Single Base Substitution C-T INTRON HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1269-S.SNP.5:16145148 chr05:016145148 0 W/16145148-16145148 FN1269-S Single Base Substitution T-G INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2083-S.SNP.5:16150298 chr05:016150298 0 W/16150298-16150298 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.866101;DP=2071;DP4=949,1045,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.17709e-08;MQSB=0.985361;RPB=0.825906;SGB=-40.0741;VDB=0.578601;EFF=UTR_5_PRIME(MODIFIER||82||487|LOC_Os05g27730|protein_coding|CODING|LOC_Os05g27730.1|1|1) FN2463.SNP.5:16152503 chr05:016152503 0 W/16152503-16152503 FN2463 SNP C -> T AC=1;AN=198;BQB=0.231125;DP=4071;DP4=2254,1533,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.34712e-08;MQSB=0.309735;RPB=0.523007;SGB=32.0901;VDB=0.0803026;EFF=UTR_3_PRIME(MODIFIER||253||487|LOC_Os05g27730|protein_coding|CODING|LOC_Os05g27730.1|5|1) FN-22.SNP.5:16152684 chr05:016152684 0 W/16152684-16152684 FN-22 Single Base Substitution C-T UTR_3_PRIME Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-19.SNP.5:16153104 chr05:016153104 0 W/16153104-16153104 FN-19 Single Base Substitution A-T INTERGENIC Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN-19.SNP.5:16153105 chr05:016153105 0 W/16153105-16153105 FN-19 Single Base Substitution C-T INTERGENIC Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN920-S.SNP.5:16154981 chr05:016154981 0 W/16154981-16154981 FN920-S Single Base Substitution A-T INTERGENIC HOMO SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN2207-S.SNP.5:16163607 chr05:016163607 0 W/16163607-16163607 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.958974;DP=4628;DP4=2001,2067,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.31864e-09;MQSB=0.014748;RPB=0.949174;SGB=-13.7759;VDB=0.0154543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.5:16171001 chr05:016171001 0 W/16171001-16171001 FN1040-S Single Base Substitution C-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN-264.SNP.5:16180427 chr05:016180427 0 W/16180427-16180427 FN-264 Single Base Substitution C-A INTERGENIC HOMO SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN3711-S.SNP.5:16180427 chr05:016180427 0 W/16180427-16180427 FN3711-S SNP C -> A AC=1;AN=190;BQB=0.634065;DP=2587;DP4=1054,875,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.51151e-06;MQSB=0.989369;RPB=0.900101;SGB=1.00337;VDB=0.598068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.5:16181265 chr05:016181265 0 W/16181265-16181265 FN2663-S SNP G -> A AC=2;AN=200;BQB=0.462162;DP=4448;DP4=2286,1867,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00022482;MQB=1.46998e-26;MQSB=0.631937;RPB=0.66931;SGB=105.035;VDB=0.671576;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.5:16181265 chr05:016181265 0 W/16181265-16181265 FN721-S Single Base Substitution G-A INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3437-S.SNP.5:16189037 chr05:016189037 0 W/16189037-16189037 FN3437-S SNP T -> C AC=1;AN=184;BQB=0.537647;DP=3989;DP4=1727,2074,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.03982e-08;MQSB=0.988101;RPB=0.858325;SGB=46.3132;VDB=0.208725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.5:16189655 chr05:016189655 0 W/16189655-16189655 FN1709-S SNP G -> T AC=1;AN=188;BQB=0.0469489;DP=3960;DP4=2259,1658,16,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16944e-09;MQSB=0.76637;RPB=0.822661;SGB=-101.181;VDB=0.088667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.5:16208099 chr05:016208099 0 W/16208099-16208099 FN1348-S Single Base Substitution G-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3369-S.SNP.5:16210547 chr05:016210547 0 W/16210547-16210547 FN3369-S SNP G -> T AC=1;AN=184;BQB=0.556006;DP=3151;DP4=1452,1608,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31849e-09;MQSB=0.99628;RPB=0.980153;SGB=56.8786;VDB=0.311825;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E99*|138|LOC_Os05g27810|protein_coding|CODING|LOC_Os05g27810.1|3|1) FN3940-S.SNP.5:16214640 chr05:016214640 0 W/16214640-16214640 FN3940-S SNP C -> T AC=1;AN=158;BQB=0.823731;DP=2084;DP4=1055,957,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.09523e-09;MQSB=0.999798;RPB=0.939338;SGB=47.5512;VDB=0.970685;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.5:16222311 chr05:016222311 0 W/16222311-16222311 FN509-S Single Base Substitution C-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN-88.SNP.5:16225848 chr05:016225848 0 W/16225848-16225848 FN-88 Single Base Substitution T-C INTERGENIC HOMO SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN434-S.SNP.5:16230499 chr05:016230499 0 W/16230499-16230499 FN434-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g27840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN3926-S.SNP.5:16243347 chr05:016243347 0 W/16243347-16243347 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.977826;DP=2174;DP4=1101,988,17,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.56802e-10;MQSB=0.500006;RPB=0.443934;SGB=103.87;VDB=0.515054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S204L|805|LOC_Os05g27860|protein_coding|CODING|LOC_Os05g27860.1|2|1) FN1344-S.SNP.5:16243362 chr05:016243362 0 W/16243362-16243362 FN1344-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g27860 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3665-S.SNP.5:16243938 chr05:016243938 0 W/16243938-16243938 FN3665-S SNP T -> C AC=1;AN=190;BQB=0.971226;DP=2228;DP4=1225,891,12,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000448833;MQB=3.68505e-14;MQSB=0.96372;RPB=0.79466;SGB=92.9626;VDB=0.824683;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S369|805|LOC_Os05g27860|protein_coding|CODING|LOC_Os05g27860.1|3|1) FN3593-S.SNP.5:16263864 chr05:016263864 0 W/16263864-16263864 FN3593-S SNP C -> T AC=1;AN=190;BQB=0.999347;DP=2904;DP4=1390,1393,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.34272e-11;MQSB=0.989568;RPB=0.909756;SGB=33.8752;VDB=0.375539;EFF=INTRON(MODIFIER||||1016|LOC_Os05g27870|protein_coding|CODING|LOC_Os05g27870.1|1|1) FN1356-S.SNP.5:16266780 chr05:016266780 0 W/16266780-16266780 FN1356-S Single Base Substitution G-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3890-S.SNP.5:16275577 chr05:016275577 0 W/16275577-16275577 FN3890-S SNP G -> A AC=2;AN=158;BQB=0.997231;DP=2484;DP4=1271,1088,33,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.25423e-30;MQSB=0.973248;RPB=0.996061;SGB=242.704;VDB=0.886826;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.5:16281175 chr05:016281175 0 W/16281175-16281175 FN1156-XA21 Single Base Substitution A-C INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1445-S.SNP.5:16283922 chr05:016283922 0 W/16283922-16283922 FN1445-S Single Base Substitution A-G INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3473-S.SNP.5:16286113 chr05:016286113 0 W/16286113-16286113 FN3473-S SNP T -> G AC=1;AN=184;BQB=0.680309;DP=2703;DP4=1250,1300,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30433e-08;MQSB=0.990996;RPB=0.120232;SGB=53.2642;VDB=0.551981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.5:16287305 chr05:016287305 0 W/16287305-16287305 FN1173-S Single Base Substitution G-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1173-S.SNP.5:16287306 chr05:016287306 0 W/16287306-16287306 FN1173-S Single Base Substitution C-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN846-S.SNP.5:16290927 chr05:016290927 0 W/16290927-16290927 FN846-S Single Base Substitution C-T INTRON HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1323-S.SNP.5:16303268 chr05:016303268 0 W/16303268-16303268 FN1323-S Single Base Substitution A-C INTRON HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN2704-S.SNP.5:16307454 chr05:016307454 0 W/16307454-16307454 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.869935;DP=4818;DP4=2408,2170,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66263e-19;MQSB=0.9986;RPB=0.821965;SGB=71.1676;VDB=0.272001;EFF=INTRON(MODIFIER||||170|LOC_Os05g27950|protein_coding|CODING|LOC_Os05g27950.1|1|1) FN1696-S.SNP.5:16313729 chr05:016313729 0 W/16313729-16313729 FN1696-S SNP C -> T AC=1;AN=188;BQB=0.06275;DP=3641;DP4=1714,1894,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.57568e-09;MQSB=0.957037;RPB=0.0770098;SGB=-93.8106;VDB=0.0230799;EFF=INTRON(MODIFIER||||710|LOC_Os05g27960|protein_coding|CODING|LOC_Os05g27960.1|10|1) FN-194.SNP.5:16319094 chr05:016319094 0 W/16319094-16319094 FN-194 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2104-S.SNP.5:16322132 chr05:016322132 0 W/16322132-16322132 FN2104-S SNP C -> T AC=1;AN=168;BQB=0.0219896;DP=3457;DP4=1674,1751,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00188862;MQSB=0.998161;RPB=0.671226;SGB=-53.9455;VDB=0.199423;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.5:16323921 chr05:016323921 0 W/16323921-16323921 FN4082-S SNP C -> T AC=1;AN=182;BQB=0.885601;DP=2716;DP4=1218,1424,13,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12255e-11;MQSB=0.968181;RPB=0.379777;SGB=93.7308;VDB=0.718977;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.5:16326650 chr05:016326650 0 W/16326650-16326650 FN904-S Single Base Substitution A-T INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2121-S.SNP.5:16326697 chr05:016326697 0 W/16326697-16326697 FN2121-S SNP G -> A AC=2;AN=168;BQB=0.940185;DP=3986;DP4=2121,1762,37,16;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=9.6616e-13;MQSB=0.495857;RPB=0.949214;SGB=-229.993;VDB=0.664789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:16328490 chr05:016328490 0 W/16328490-16328490 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.97983;DP=4758;DP4=2193,2281,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.01337e-12;MQSB=0.962124;RPB=0.271667;SGB=32.0901;VDB=0.623607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:16328495 chr05:016328495 0 W/16328495-16328495 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.841604;DP=4707;DP4=2198,2273,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.23647e-10;MQSB=0.927824;RPB=0.302482;SGB=51.0851;VDB=0.353389;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.5:16328499 chr05:016328499 0 W/16328499-16328499 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.659773;DP=4685;DP4=2203,2243,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90255e-10;MQSB=0.927287;RPB=0.150327;SGB=34.6953;VDB=0.270551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.5:16332667 chr05:016332667 0 W/16332667-16332667 FN1219-S Single Base Substitution C-T INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3786-S.SNP.5:16335004 chr05:016335004 0 W/16335004-16335004 FN3786-S SNP A -> C AC=2;AN=190;BQB=0.39041;DP=1799;DP4=810,846,9,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.71521e-07;MQSB=0.792453;RPB=0.173193;SGB=28.7675;VDB=0.887017;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.5:16335516 chr05:016335516 0 W/16335516-16335516 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN911-S.SNP.5:16338120 chr05:016338120 0 W/16338120-16338120 FN911-S Single Base Substitution C-G INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN464-S.SNP.5:16340179 chr05:016340179 0 W/16340179-16340179 FN464-S Single Base Substitution C-T INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3359-S.SNP.5:16345760 chr05:016345760 0 W/16345760-16345760 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.677;DP=2960;DP4=1486,1363,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59159e-11;MQSB=0.999367;RPB=0.938842;SGB=93.9603;VDB=0.797369;EFF=INTRON(MODIFIER||||149|LOC_Os05g28010|protein_coding|CODING|LOC_Os05g28010.2|1|1),INTRON(MODIFIER||||200|LOC_Os05g28010|protein_coding|CODING|LOC_Os05g28010.1|1|1) FN2639-S.SNP.5:16348841 chr05:016348841 0 W/16348841-16348841 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.329647;DP=5081;DP4=2509,2358,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.23416e-19;MQSB=0.986773;RPB=0.883783;SGB=94.3471;VDB=0.793303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:16348842 chr05:016348842 0 W/16348842-16348842 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.996348;DP=5074;DP4=2502,2355,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.9193e-20;MQSB=0.99762;RPB=0.968504;SGB=30.3571;VDB=0.849008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.5:16349853 chr05:016349853 0 W/16349853-16349853 FN4032-S SNP G -> A AC=2;AN=168;BQB=0.627392;DP=2907;DP4=1409,1258,21,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.4702e-19;MQSB=0.903508;RPB=0.357341;SGB=-51.4578;VDB=0.193055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.5:16352376 chr05:016352376 0 W/16352376-16352376 FN2399 SNP G -> A AC=1;AN=200;BQB=0.326587;DP=3929;DP4=1958,1754,11,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=9.12128e-05;MQSB=0.325939;RPB=0.73609;SGB=37.3004;VDB=0.0904734;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.5:16352382 chr05:016352382 0 W/16352382-16352382 FN-44 Single Base Substitution G-A INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN4344-S.SNP.5:16353638 chr05:016353638 0 W/16353638-16353638 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.95379;DP=2404;DP4=981,1362,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.51923e-05;MQSB=0.860653;RPB=0.975916;SGB=34.5445;VDB=0.716164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.5:16356302 chr05:016356302 0 W/16356302-16356302 FN3858-S SNP C -> G AC=1;AN=158;BQB=0.936144;DP=1377;DP4=604,603,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00010877;MQSB=0.985332;RPB=0.495233;SGB=25.2211;VDB=0.326789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.5:16360028 chr05:016360028 0 W/16360028-16360028 FN2498 SNP G -> T AC=1;AN=200;BQB=0.662981;DP=5152;DP4=2336,2356,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93969e-09;MQSB=0.558895;RPB=0.514764;SGB=47.4799;VDB=0.398125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.5:16361691 chr05:016361691 0 W/16361691-16361691 FN-245 Single Base Substitution A-T INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1222-S.SNP.5:16365391 chr05:016365391 0 W/16365391-16365391 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN666-S.SNP.5:16367145 chr05:016367145 0 W/16367145-16367145 FN666-S Single Base Substitution T-C INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN1519-S.SNP.5:16367154 chr05:016367154 0 W/16367154-16367154 FN1519-S Single Base Substitution A-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3837-S.SNP.5:16372154 chr05:016372154 0 W/16372154-16372154 FN3837-S SNP G -> C AC=1;AN=190;BQB=0.976553;DP=2842;DP4=1244,1518,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2394e-06;MQSB=0.996531;RPB=0.563897;SGB=35.4339;VDB=0.094989;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.5:16375153 chr05:016375153 0 W/16375153-16375153 FN2708-S SNP G -> C AC=1;AN=200;BQB=0.975079;DP=4669;DP4=2085,2344,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.8927e-10;MQSB=0.990388;RPB=0.82464;SGB=63.4749;VDB=0.439254;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.5:16378789 chr05:016378789 0 W/16378789-16378789 FN786-S Single Base Substitution C-T INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2650-S.SNP.5:16391825 chr05:016391825 0 W/16391825-16391825 FN2650-S SNP G -> A AC=2;AN=200;BQB=0.91545;DP=5306;DP4=2557,2417,26,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03503e-27;MQSB=0.962144;RPB=0.564816;SGB=162.845;VDB=0.42531;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.5:16398336 chr05:016398336 0 W/16398336-16398336 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1108-S.SNP.5:16404526 chr05:016404526 0 W/16404526-16404526 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN797-S.SNP.5:16406045 chr05:016406045 0 W/16406045-16406045 FN797-S Single Base Substitution C-T INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3844-S.SNP.5:16415512 chr05:016415512 0 W/16415512-16415512 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.724394;DP=3235;DP4=1706,1378,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.04442e-09;MQSB=0.744297;RPB=0.423736;SGB=67.3108;VDB=0.982997;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.5:16418486 chr05:016418486 0 W/16418486-16418486 FN4240-S SNP G -> T AC=1;AN=170;BQB=0.982076;DP=2175;DP4=1162,964,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.40252e-06;MQSB=0.999768;RPB=0.80945;SGB=21.1076;VDB=0.362242;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.5:16426667 chr05:016426667 0 W/16426667-16426667 FN664-S Single Base Substitution G-A INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN1307-S.SNP.5:16430155 chr05:016430155 0 W/16430155-16430155 FN1307-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1692-S.SNP.5:16438164 chr05:016438164 0 W/16438164-16438164 FN1692-S SNP A -> G AC=2;AN=188;BQB=0.0315889;DP=1745;DP4=744,950,5,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.000805707;MQSB=0.67446;RPB=0.957828;SGB=-16.0863;VDB=0.0883424;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.5:16438237 chr05:016438237 0 W/16438237-16438237 FN-95 Single Base Substitution C-T INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-87.SNP.5:16446108 chr05:016446108 0 W/16446108-16446108 FN-87 Single Base Substitution C-T INTRON HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3593-S.SNP.5:16446218 chr05:016446218 0 W/16446218-16446218 FN3593-S SNP C -> T AC=1;AN=190;BQB=0.995437;DP=1890;DP4=765,1031,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0037037;MQB=0.000144598;MQSB=0.00132684;RPB=0.569758;SGB=28.9929;VDB=0.131446;EFF=INTRON(MODIFIER||||1854|LOC_Os05g28120|protein_coding|CODING|LOC_Os05g28120.1|13|1) FN1040-S.SNP.5:16462732 chr05:016462732 0 W/16462732-16462732 FN1040-S Single Base Substitution G-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3342-S.SNP.5:16464327 chr05:016464327 0 W/16464327-16464327 FN3342-S SNP T -> A AC=1;AN=184;BQB=0.999981;DP=3574;DP4=1715,1677,13,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91391e-08;MQSB=0.635254;RPB=0.975653;SGB=62.3078;VDB=0.512385;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.5:16468477 chr05:016468477 0 W/16468477-16468477 FN445-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1317-S.SNP.5:16474154 chr05:016474154 0 W/16474154-16474154 FN1317-S Single Base Substitution A-G INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN696-S.SNP.5:16497248 chr05:016497248 0 W/16497248-16497248 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1522-S.SNP.5:16497698 chr05:016497698 0 W/16497698-16497698 FN1522-S Single Base Substitution C-T INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN456-S.SNP.5:16500579 chr05:016500579 0 W/16500579-16500579 FN456-S Single Base Substitution T-C INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1421-S.SNP.5:16503537 chr05:016503537 0 W/16503537-16503537 FN1421-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g28190 ranBP1 domain containing protein, expressed SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3574-S.SNP.5:16504254 chr05:016504254 0 W/16504254-16504254 FN3574-S SNP T -> C AC=1;AN=188;BQB=0.933228;DP=2872;DP4=1316,1404,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.3679e-13;MQSB=0.945635;RPB=0.53265;SGB=36.2493;VDB=0.0842967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T193A|472|LOC_Os05g28190|protein_coding|CODING|LOC_Os05g28190.1|2|1) FN3806-S.SNP.5:16506911 chr05:016506911 0 W/16506911-16506911 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.863204;DP=3334;DP4=2004,1216,18,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77277e-10;MQSB=0.997453;RPB=0.786507;SGB=44.0907;VDB=0.0329827;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.5:16527997 chr05:016527997 0 W/16527997-16527997 FN1124-S Single Base Substitution T-C INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN-387.SNP.5:16533062 chr05:016533062 0 W/16533062-16533062 FN-387 Single Base Substitution G-A INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-114.SNP.5:16533600 chr05:016533600 0 W/16533600-16533600 FN-114 Single Base Substitution T-C INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2547-S.SNP.5:16546060 chr05:016546060 0 W/16546060-16546060 FN2547-S SNP C -> G AC=1;AN=198;BQB=0.390976;DP=4208;DP4=2031,1996,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.54482e-11;MQSB=0.994657;RPB=0.911705;SGB=72.5245;VDB=0.796622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q140E|321|LOC_Os05g28260|protein_coding|CODING|LOC_Os05g28260.1|5|1) W706-3-1.SNP.5:16548188 chr05:016548188 0 W/16548188-16548188 W706-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3829-S.SNP.5:16550811 chr05:016550811 0 W/16550811-16550811 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.929401;DP=3173;DP4=1517,1574,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0122063;MQSB=0.134894;RPB=0.161671;SGB=35.4339;VDB=0.456982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:16552187 chr05:016552187 0 W/16552187-16552187 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.87346;DP=2845;DP4=652,2009,0,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.40304e-06;MQSB=7.07319e-30;RPB=0.897943;SGB=54.2646;VDB=0.128765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.5:16552595 chr05:016552595 0 W/16552595-16552595 FN2252-S SNP T -> G AC=2;AN=190;BQB=0.291056;DP=4514;DP4=2171,1858,24,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.92267e-26;MQSB=0.787465;RPB=1;SGB=107.938;VDB=0.669112;EFF=INTRON(MODIFIER||||393|LOC_Os05g28280|protein_coding|CODING|LOC_Os05g28280.1|2|1) FN4153-S.SNP.5:16554827 chr05:016554827 0 W/16554827-16554827 FN4153-S SNP G -> T AC=1;AN=170;BQB=0.974559;DP=2657;DP4=1269,1307,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00529e-06;MQSB=0.921975;RPB=0.579542;SGB=10.1134;VDB=0.470677;EFF=INTRON(MODIFIER||||393|LOC_Os05g28280|protein_coding|CODING|LOC_Os05g28280.1|7|1) FN-96.SNP.5:16565348 chr05:016565348 0 W/16565348-16565348 FN-96 Single Base Substitution G-A INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN3459-S.SNP.5:16570385 chr05:016570385 0 W/16570385-16570385 FN3459-S SNP A -> T AC=2;AN=184;BQB=0.998134;DP=2744;DP4=1354,1282,7,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.49464e-10;MQSB=0.986593;RPB=0.945229;SGB=30.8405;VDB=0.210319;EFF=INTRON(MODIFIER||||1251|LOC_Os05g28300|protein_coding|CODING|LOC_Os05g28300.1|5|1) FN2607-S.SNP.5:16582094 chr05:016582094 0 W/16582094-16582094 FN2607-S SNP A -> T AC=1;AN=198;BQB=0.916088;DP=4072;DP4=1737,1832,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00168e-06;MQSB=0.57956;RPB=0.398187;SGB=6.15916;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.5:16585374 chr05:016585374 0 W/16585374-16585374 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.895749;DP=2657;DP4=1264,1316,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.30269e-06;MQSB=0.992512;RPB=0.715666;SGB=34.0735;VDB=0.157218;EFF=INTRON(MODIFIER||||93|LOC_Os05g28330|protein_coding|CODING|LOC_Os05g28330.1|1|1) FN2555-S.SNP.5:16587093 chr05:016587093 0 W/16587093-16587093 FN2555-S SNP T -> C AC=1;AN=198;BQB=0.942679;DP=4341;DP4=1803,2313,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.47343e-07;MQSB=0.968826;RPB=0.675038;SGB=36.5539;VDB=0.30927;EFF=INTRON(MODIFIER||||93|LOC_Os05g28330|protein_coding|CODING|LOC_Os05g28330.1|3|1) FN1025-S.SNP.5:16589351 chr05:016589351 0 W/16589351-16589351 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1551-S.SNP.5:16589382 chr05:016589382 0 W/16589382-16589382 FN1551-S Single Base Substitution G-A INTERGENIC Homo SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1504-S.SNP.5:16597273 chr05:016597273 0 W/16597273-16597273 FN1504-S Single Base Substitution A-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN-127.SNP.5:16597412 chr05:016597412 0 W/16597412-16597412 FN-127 Single Base Substitution G-A INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3358-S.SNP.5:16605839 chr05:016605839 0 W/16605839-16605839 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.984185;DP=2668;DP4=1159,1438,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.34585e-07;MQSB=0.979242;RPB=0.798796;SGB=44.2207;VDB=0.878088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.5:16614696 chr05:016614696 0 W/16614696-16614696 FN1460-S Single Base Substitution C-T INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN-155.SNP.5:16615669 chr05:016615669 0 W/16615669-16615669 FN-155 Single Base Substitution A-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-23.SNP.5:16615669 chr05:016615669 0 W/16615669-16615669 FN-23 Single Base Substitution A-T INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN4071-S.SNP.5:16615669 chr05:016615669 0 W/16615669-16615669 FN4071-S SNP A -> T AC=1;AN=182;BQB=0.971377;DP=2805;DP4=1296,1398,10,1;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.16315e-07;MQSB=0.873059;RPB=0.947917;SGB=28.6061;VDB=0.662696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.5:16621022 chr05:016621022 0 W/16621022-16621022 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.468002;DP=2924;DP4=1480,1372,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.23024e-06;MQSB=0.881401;RPB=0.829925;SGB=53.5223;VDB=0.723336;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.5:16629385 chr05:016629385 0 W/16629385-16629385 FN-149 Single Base Substitution A-T INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1094-S.SNP.5:16630315 chr05:016630315 0 W/16630315-16630315 FN1094-S Single Base Substitution C-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN323-S.SNP.5:16639162 chr05:016639162 0 W/16639162-16639162 FN323-S Single Base Substitution G-A INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1369-S.SNP.5:16640887 chr05:016640887 0 W/16640887-16640887 FN1369-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g28420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3358-S.SNP.5:16642243 chr05:016642243 0 W/16642243-16642243 FN3358-S SNP G -> A AC=1;AN=184;BQB=0.942837;DP=2840;DP4=1304,1449,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000352113;MQB=9.05985e-05;MQSB=0.279851;RPB=0.971782;SGB=39.699;VDB=0.887186;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D432N|845|LOC_Os05g28420|protein_coding|CODING|LOC_Os05g28420.1|4|1) FN-114.SNP.5:16644272 chr05:016644272 0 W/16644272-16644272 FN-114 Single Base Substitution C-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN471-S.SNP.5:16644825 chr05:016644825 0 W/16644825-16644825 FN471-S Single Base Substitution C-T INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1001-S.SNP.5:16646634 chr05:016646634 0 W/16646634-16646634 FN1001-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g28430 transposon protein, putative, CACTA, En/Spm sub-class SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN628-S.SNP.5:16646634 chr05:016646634 0 W/16646634-16646634 FN628-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g28430 transposon protein, putative, CACTA, En/Spm sub-class SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. W500-4-7-1.SNP.5:16654079 chr05:016654079 0 W/16654079-16654079 W500-4-7-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN862-S.SNP.5:16662109 chr05:016662109 0 W/16662109-16662109 FN862-S Single Base Substitution G-A INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN3438-S.SNP.5:16662172 chr05:016662172 0 W/16662172-16662172 FN3438-S SNP G -> C AC=2;AN=184;BQB=0.997516;DP=2724;DP4=1217,1360,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.4188e-17;MQSB=0.543886;RPB=0.638181;SGB=148.222;VDB=0.830137;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.5:16668475 chr05:016668475 0 W/16668475-16668475 FN-8 Single Base Substitution A-C INTRON Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN-183.SNP.5:16671997 chr05:016671997 0 W/16671997-16671997 FN-183 Single Base Substitution A-T INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN2304.SNP.5:16676579 chr05:016676579 0 W/16676579-16676579 FN2304 SNP G -> A AC=1;AN=192;BQB=0.00373062;DP=4848;DP4=2393,2136,18,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206271;MQB=2.87123e-13;MQSB=0.392529;RPB=0.930791;SGB=125.324;VDB=0.560602;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.5:16676664 chr05:016676664 0 W/16676664-16676664 FN4182-S SNP G -> A AC=2;AN=170;BQB=0.999548;DP=2171;DP4=950,1152,6,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.44084e-06;MQSB=0.772483;RPB=0.789802;SGB=52.3148;VDB=0.301224;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.5:16687219 chr05:016687219 0 W/16687219-16687219 FN3629-S SNP C -> A AC=1;AN=190;BQB=0.0336392;DP=1522;DP4=598,670,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.103574;MQSB=0.616329;RPB=0.676445;SGB=-2.10437;VDB=0.469204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L58I|488|LOC_Os05g28500|protein_coding|CODING|LOC_Os05g28500.1|1|1) FN3791-S.SNP.5:16690163 chr05:016690163 0 W/16690163-16690163 FN3791-S SNP G -> A AC=2;AN=190;BQB=0.634138;DP=2837;DP4=1562,1156,20,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.21652e-18;MQSB=1;RPB=0.853958;SGB=121.394;VDB=0.868427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E320K|488|LOC_Os05g28500|protein_coding|CODING|LOC_Os05g28500.1|2|1) FN758-S.SNP.5:16692544 chr05:016692544 0 W/16692544-16692544 FN758-S Single Base Substitution T-A INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2423.SNP.5:16699758 chr05:016699758 0 W/16699758-16699758 FN2423 SNP C -> T AC=1;AN=200;BQB=0.40642;DP=4421;DP4=2097,2089,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.49265e-16;MQSB=0.997817;RPB=0.890849;SGB=83.5316;VDB=0.690995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.2|2|1) FN2582-S.SNP.5:16699758 chr05:016699758 0 W/16699758-16699758 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.810423;DP=4221;DP4=1987,2003,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.01514e-10;MQSB=0.874197;RPB=0.815017;SGB=9.3494;VDB=0.295676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R383C|868|LOC_Os05g28510|protein_coding|CODING|LOC_Os05g28510.2|2|1) FN3420-S.SNP.5:16703382 chr05:016703382 0 W/16703382-16703382 FN3420-S SNP A -> G AC=1;AN=184;BQB=0.941132;DP=3115;DP4=1435,1569,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.15767e-05;MQSB=0.906773;RPB=0.243989;SGB=25.1826;VDB=0.781995;EFF=INTRON(MODIFIER||||533|LOC_Os05g28520|protein_coding|CODING|LOC_Os05g28520.1|3|1),INTRON(MODIFIER||||448|LOC_Os05g28520|protein_coding|CODING|LOC_Os05g28520.2|1|1) FN3854-S.SNP.5:16711300 chr05:016711300 0 W/16711300-16711300 FN3854-S SNP C -> A AC=2;AN=158;BQB=0.847485;DP=1952;DP4=1135,729,7,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.7522e-09;MQSB=0.24463;RPB=0.883514;SGB=26.1881;VDB=0.187865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.5:16716381 chr05:016716381 0 W/16716381-16716381 FN3917-S SNP G -> T AC=1;AN=158;BQB=0.47666;DP=2163;DP4=1015,1056,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.15981e-07;MQSB=0.873933;RPB=0.17138;SGB=14.3409;VDB=0.302434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.5:16721529 chr05:016721529 0 W/16721529-16721529 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.989794;DP=3205;DP4=1789,1304,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000312012;MQB=3.79511e-06;MQSB=0.991053;RPB=0.773592;SGB=28.9929;VDB=0.0737652;EFF=INTRON(MODIFIER||||963|LOC_Os05g28540|protein_coding|CODING|LOC_Os05g28540.1|1|1) FN2198-S.SNP.5:16721754 chr05:016721754 0 W/16721754-16721754 FN2198-S SNP C -> T AC=2;AN=190;BQB=0.646951;DP=4539;DP4=2045,2145,25,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000220313;MQB=1.1766e-19;MQSB=0.488071;RPB=0.266421;SGB=53.8352;VDB=0.0306104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S150L|963|LOC_Os05g28540|protein_coding|CODING|LOC_Os05g28540.1|2|1) FN3831-S.SNP.5:16722876 chr05:016722876 0 W/16722876-16722876 FN3831-S SNP C -> T AC=2;AN=190;BQB=0.919058;DP=4136;DP4=2091,1866,25,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27411e-26;MQSB=0.685886;RPB=0.753053;SGB=102.83;VDB=0.836619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P473L|963|LOC_Os05g28540|protein_coding|CODING|LOC_Os05g28540.1|3|1) FN851-S.SNP.5:16722876 chr05:016722876 0 W/16722876-16722876 FN851-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g28540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3282-S.SNP.5:16723674 chr05:016723674 0 W/16723674-16723674 FN3282-S SNP A -> T AC=1;AN=184;BQB=0.939088;DP=3431;DP4=1760,1563,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25245e-10;MQSB=0.922272;RPB=0.887292;SGB=53.3568;VDB=0.819298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D739V|963|LOC_Os05g28540|protein_coding|CODING|LOC_Os05g28540.1|3|1) FN1412-S.SNP.5:16726495 chr05:016726495 0 W/16726495-16726495 FN1412-S Single Base Substitution G-A INTRON HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3553-S.SNP.5:16727989 chr05:016727989 0 W/16727989-16727989 FN3553-S SNP T -> C AC=2;AN=188;BQB=0.846151;DP=2867;DP4=1310,1389,16,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.49933e-19;MQSB=0.971015;RPB=0.633435;SGB=148.931;VDB=0.0372828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T718A|719|LOC_Os05g28560|protein_coding|CODING|LOC_Os05g28560.1|6|1) FN1650-S.SNP.5:16735054 chr05:016735054 0 W/16735054-16735054 FN1650-S Single Base Substitution T-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3495-S.SNP.5:16736557 chr05:016736557 0 W/16736557-16736557 FN3495-S SNP T -> A AC=1;AN=188;BQB=0.95952;DP=3155;DP4=1362,1686,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7106e-11;MQSB=0.998823;RPB=0.905016;SGB=8.62479;VDB=0.794297;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.5:16743031 chr05:016743031 0 W/16743031-16743031 FN1151-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g28600 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3740-S.SNP.5:16745356 chr05:016745356 0 W/16745356-16745356 FN3740-S SNP G -> A AC=1;AN=190;BQB=0.99755;DP=3144;DP4=1603,1428,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.30427e-12;MQSB=0.999996;RPB=0.981942;SGB=80.9724;VDB=0.157918;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.5:16745415 chr05:016745415 0 W/16745415-16745415 FN-328 Single Base Substitution T-A INTERGENIC HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3723-S.SNP.5:16747631 chr05:016747631 0 W/16747631-16747631 FN3723-S SNP A -> C AC=2;AN=190;BQB=0.906476;DP=2935;DP4=1398,1441,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.63715e-12;MQSB=0.999999;RPB=0.210798;SGB=76.4186;VDB=0.125295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.5:16747633 chr05:016747633 0 W/16747633-16747633 FN3723-S SNP A -> G AC=2;AN=190;BQB=0.929677;DP=2939;DP4=1392,1440,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.28194e-12;MQSB=0.999997;RPB=0.276461;SGB=76.4186;VDB=0.127523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.5:16749529 chr05:016749529 0 W/16749529-16749529 FN3294-S SNP A -> T AC=2;AN=184;BQB=0.976317;DP=2674;DP4=1286,1280,9,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.34651e-13;MQSB=0.994212;RPB=0.876415;SGB=107.526;VDB=0.805984;EFF=INTRON(MODIFIER||||161|LOC_Os05g28610|protein_coding|CODING|LOC_Os05g28610.1|1|1) FN3388-S.SNP.5:16750796 chr05:016750796 0 W/16750796-16750796 FN3388-S SNP A -> T AC=1;AN=184;BQB=0.605178;DP=2996;DP4=1139,1706,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92702e-11;MQSB=0.997702;RPB=0.943361;SGB=71.3514;VDB=0.627039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.5:16750797 chr05:016750797 0 W/16750797-16750797 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.996272;DP=2998;DP4=1146,1734,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.95408e-13;MQSB=0.995948;RPB=0.862269;SGB=11.3677;VDB=0.293058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.5:16772805 chr05:016772805 0 W/16772805-16772805 FN3510-S SNP T -> A AC=1;AN=188;BQB=0.846414;DP=2459;DP4=1241,1164,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.90958e-12;MQSB=0.937514;RPB=0.534734;SGB=94.4119;VDB=0.0570436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.5:16791259 chr05:016791259 0 W/16791259-16791259 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.602774;DP=4864;DP4=2063,2535,4,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.49655e-05;MQSB=0.944893;RPB=0.13599;SGB=35.8441;VDB=0.449235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.5:16794786 chr05:016794786 0 W/16794786-16794786 FN-136 Single Base Substitution G-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3556-S.SNP.5:16796241 chr05:016796241 0 W/16796241-16796241 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.998324;DP=3023;DP4=1154,1771,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.81832e-16;MQSB=0.931231;RPB=0.987897;SGB=82.0471;VDB=0.630048;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.5:16803353 chr05:016803353 0 W/16803353-16803353 FN1324-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1324-S.SNP.5:16803354 chr05:016803354 0 W/16803354-16803354 FN1324-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2558-S.SNP.5:16803833 chr05:016803833 0 W/16803833-16803833 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.804589;DP=4513;DP4=2213,1986,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.60224e-07;MQSB=0.929107;RPB=0.983389;SGB=40.3588;VDB=0.154586;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.5:16805721 chr05:016805721 0 W/16805721-16805721 FN416-S Single Base Substitution A-G INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN416-S.SNP.5:16805722 chr05:016805722 0 W/16805722-16805722 FN416-S Single Base Substitution A-G INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1104-S.SNP.5:16818561 chr05:016818561 0 W/16818561-16818561 FN1104-S Single Base Substitution A-T SPLICE_SITE_REGION HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3508-S.SNP.5:16819965 chr05:016819965 0 W/16819965-16819965 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.94987;DP=3579;DP4=1851,1649,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00419112;MQB=3.76209e-06;MQSB=0.256868;RPB=0.766757;SGB=60.7873;VDB=0.519851;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A374T|459|LOC_Os05g28670|protein_coding|CODING|LOC_Os05g28670.1|7|1) FN1478-S.SNP.5:16822508 chr05:016822508 0 W/16822508-16822508 FN1478-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN-125.SNP.5:16823315 chr05:016823315 0 W/16823315-16823315 FN-125 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-75.SNP.5:16823315 chr05:016823315 0 W/16823315-16823315 FN-75 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1271-S.SNP.5:16823315 chr05:016823315 0 W/16823315-16823315 FN1271-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2617-S.SNP.5:16823315 chr05:016823315 0 W/16823315-16823315 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.98173;DP=3990;DP4=1814,1891,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000250627;MQB=6.59919e-13;MQSB=0.949758;RPB=0.426554;SGB=90.9049;VDB=0.719846;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S979|1565|LOC_Os05g28680|protein_coding|CODING|LOC_Os05g28680.1|5|1) FN2660-S.SNP.5:16823315 chr05:016823315 0 W/16823315-16823315 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.952282;DP=4652;DP4=2212,2137,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76434e-13;MQSB=0.993879;RPB=0.709451;SGB=17.5158;VDB=0.0804031;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S979|1565|LOC_Os05g28680|protein_coding|CODING|LOC_Os05g28680.1|5|1) FN3421-S.SNP.5:16825168 chr05:016825168 0 W/16825168-16825168 FN3421-S SNP C -> T AC=2;AN=184;BQB=0.888055;DP=3941;DP4=1881,1920,18,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.21463e-18;MQSB=0.987706;RPB=0.533107;SGB=161.787;VDB=0.515517;EFF=SPLICE_SITE_REGION(LOW||||1565|LOC_Os05g28680|protein_coding|CODING|LOC_Os05g28680.1|2|1),INTRON(MODIFIER||||1565|LOC_Os05g28680|protein_coding|CODING|LOC_Os05g28680.1|2|1) FN2653-S.SNP.5:16825246 chr05:016825246 0 W/16825246-16825246 FN2653-S SNP A -> G AC=1;AN=200;BQB=0.755519;DP=4586;DP4=2123,2233,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.40895e-18;MQSB=0.976116;RPB=0.948613;SGB=58.1418;VDB=0.787253;EFF=INTRON(MODIFIER||||1565|LOC_Os05g28680|protein_coding|CODING|LOC_Os05g28680.1|2|1) FN1446-S.SNP.5:16826067 chr05:016826067 0 W/16826067-16826067 FN1446-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g28680 retrotransposon protein, putative, unclassified, expressed SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2205-S.SNP.5:16830148 chr05:016830148 0 W/16830148-16830148 FN2205-S SNP T -> A AC=2;AN=190;BQB=0.83089;DP=4193;DP4=2024,1457,29,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000238493;MQB=1.06386e-13;MQSB=0.000166497;RPB=0.726871;SGB=97.7221;VDB=0.180167;EFF=UTR_5_PRIME(MODIFIER||151||1001|LOC_Os05g28690|protein_coding|CODING|LOC_Os05g28690.1|1|1) FN-283.SNP.5:16840511 chr05:016840511 0 W/16840511-16840511 FN-283 Single Base Substitution G-T INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2320.SNP.5:16844743 chr05:016844743 0 W/16844743-16844743 FN2320 SNP G -> T AC=1;AN=192;BQB=0.983447;DP=5198;DP4=2528,2351,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.16898e-10;MQSB=0.9965;RPB=0.932638;SGB=10.4835;VDB=0.380423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.5:16846883 chr05:016846883 0 W/16846883-16846883 FN2659-S SNP T -> C AC=1;AN=200;BQB=0.740871;DP=4616;DP4=2247,2079,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91672e-14;MQSB=0.817082;RPB=0.922285;SGB=104.921;VDB=0.951666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y327H|632|LOC_Os05g28720|protein_coding|CODING|LOC_Os05g28720.1|1|1) FN2629-S.SNP.5:16856243 chr05:016856243 0 W/16856243-16856243 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.478649;DP=4821;DP4=2118,2408,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79545e-09;MQSB=0.985246;RPB=0.855619;SGB=26.8797;VDB=0.142522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.5:16865484 chr05:016865484 0 W/16865484-16865484 FN3811-S SNP G -> C AC=1;AN=190;BQB=0.673763;DP=2994;DP4=1488,1371,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.12501e-07;MQSB=0.999732;RPB=0.989284;SGB=58.2031;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.5:16868216 chr05:016868216 0 W/16868216-16868216 FN3417-S SNP T -> A AC=1;AN=184;BQB=0.966491;DP=2696;DP4=1393,1218,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.29306e-06;MQSB=0.889666;RPB=0.220919;SGB=35.1773;VDB=0.883436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.5:16870662 chr05:016870662 0 W/16870662-16870662 FN2444 SNP C -> T AC=2;AN=200;BQB=0.486439;DP=4672;DP4=2657,1745,35,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.36931e-30;MQSB=0.975099;RPB=0.815859;SGB=195.292;VDB=0.920347;EFF=INTRON(MODIFIER||||395|LOC_Os05g28770|protein_coding|CODING|LOC_Os05g28770.1|3|1) FN598-S.SNP.5:16873906 chr05:016873906 0 W/16873906-16873906 FN598-S Single Base Substitution C-T INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN490-S.SNP.5:16878175 chr05:016878175 0 W/16878175-16878175 FN490-S Single Base Substitution C-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN2767-S.SNP.5:16880398 chr05:016880398 0 W/16880398-16880398 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.775683;DP=3646;DP4=1742,1573,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.2835e-06;MQSB=0.799888;RPB=0.672529;SGB=40.3588;VDB=0.726254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.5:16880766 chr05:016880766 0 W/16880766-16880766 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.999826;DP=2335;DP4=1606,617,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.035546;MQB=0.0169359;MQSB=0.908762;RPB=0.326175;SGB=45.0404;VDB=0.285616;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.5:16883429 chr05:016883429 0 W/16883429-16883429 FN-284 Single Base Substitution T-C INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN1287-S.SNP.5:16883702 chr05:016883702 0 W/16883702-16883702 FN1287-S Single Base Substitution G-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1287-S.SNP.5:16883706 chr05:016883706 0 W/16883706-16883706 FN1287-S Single Base Substitution T-G INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1651-S.SNP.5:16885890 chr05:016885890 0 W/16885890-16885890 FN1651-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g28800 LIPLESS1, putative, expressed SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN1002-S.SNP.5:16887630 chr05:016887630 0 W/16887630-16887630 FN1002-S Single Base Substitution C-T INTERGENIC HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1741-S.SNP.5:16888065 chr05:016888065 0 W/16888065-16888065 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.952234;DP=2783;DP4=1756,999,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23813e-08;MQSB=0.920686;RPB=0.744031;SGB=43.0708;VDB=0.729547;EFF=INTRON(MODIFIER||||83|LOC_Os05g28810|protein_coding|CODING|LOC_Os05g28810.1|1|1) FN1582-S.SNP.5:16890864 chr05:016890864 0 W/16890864-16890864 FN1582-S Single Base Substitution A-T INTRON Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1755-S.SNP.5:16890864 chr05:016890864 0 W/16890864-16890864 FN1755-S SNP A -> T AC=1;AN=188;BQB=2.45235e-16;DP=3855;DP4=1868,1880,14,35;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000259403;MQB=3.37054e-06;MQSB=0.0553765;RPB=0.0357304;SGB=-1228.44;VDB=0.0359947;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|1|1) FN1384-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN1384-S Single Base Substitution T-A INTRON HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2096-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN2096-S SNP T -> A AC=2;AN=168;BQB=1.47176e-07;DP=3903;DP4=1886,1913,15,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000512426;MQB=0.000181344;MQSB=0.00853722;RPB=0.918464;SGB=-558.279;VDB=0.286405;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|1|1) FN2181-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN2181-S SNP T -> A AC=2;AN=190;BQB=0.41761;DP=3746;DP4=1595,1784,10,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.56583e-11;MQSB=0.0174109;RPB=0.799512;SGB=71.6393;VDB=0.000420796;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|1|1) FN3305-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN3305-S SNP T -> A AC=2;AN=184;BQB=0.760422;DP=2197;DP4=902,976,7,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=0.00796943;MQSB=0.297845;RPB=0.968957;SGB=-2.32838;VDB=0.491564;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|1|1) FN3841-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN3841-S SNP T -> A AC=2;AN=190;BQB=0.0822248;DP=1947;DP4=839,840,11,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.00214101;MQSB=0.342144;RPB=0.777404;SGB=-36.3245;VDB=0.228838;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|1|1) FN773-S.SNP.5:16890867 chr05:016890867 0 W/16890867-16890867 FN773-S Single Base Substitution T-A INTRON HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1309-S.SNP.5:16891825 chr05:016891825 0 W/16891825-16891825 FN1309-S Single Base Substitution A-T INTRON HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. W278-3-1.SNP.5:16892071 chr05:016892071 0 W/16892071-16892071 W278-3-1 Single Base Substitution T-C INTRON HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3287-S.SNP.5:16895478 chr05:016895478 0 W/16895478-16895478 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.983639;DP=2701;DP4=1424,1189,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.011107;MQB=2.17121e-08;MQSB=0.641634;RPB=1;SGB=89.4385;VDB=0.357253;EFF=INTRON(MODIFIER||||378|LOC_Os05g28820|protein_coding|CODING|LOC_Os05g28820.1|4|1) FN939-S.SNP.5:16897098 chr05:016897098 0 W/16897098-16897098 FN939-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2381.SNP.5:16922039 chr05:016922039 0 W/16922039-16922039 FN2381 SNP G -> T AC=1;AN=192;BQB=0.340399;DP=5438;DP4=2668,2492,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.73291e-14;MQSB=0.938311;RPB=0.999399;SGB=-40.9913;VDB=0.338923;EFF=INTRON(MODIFIER||||580|LOC_Os05g28860|protein_coding|CODING|LOC_Os05g28860.1|4|1),INTRON(MODIFIER||||492|LOC_Os05g28860|protein_coding|CODING|LOC_Os05g28860.2|4|1) FN2719-S.SNP.5:16925178 chr05:016925178 0 W/16925178-16925178 FN2719-S SNP T -> A AC=1;AN=200;BQB=0.404776;DP=4705;DP4=2196,2245,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77041e-07;MQSB=0.914694;RPB=0.182261;SGB=-13.7154;VDB=0.211994;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.5:16929493 chr05:016929493 0 W/16929493-16929493 FN886-S Single Base Substitution G-A INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2358.SNP.5:16934224 chr05:016934224 0 W/16934224-16934224 FN2358 SNP G -> T AC=1;AN=192;BQB=0.317687;DP=4186;DP4=1923,1876,3,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.00479081;MQSB=0.985998;RPB=0.623331;SGB=18.3944;VDB=0.762988;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.5:16934256 chr05:016934256 0 W/16934256-16934256 FN711-S Single Base Substitution G-A INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN3339-S.SNP.5:16940060 chr05:016940060 0 W/16940060-16940060 FN3339-S SNP T -> C AC=2;AN=184;BQB=0.978889;DP=3620;DP4=1875,1568,13,15;HOB=0.0215028;ICB=0.494625;MQ=24;MQ0F=0.170442;MQB=0.00466014;MQSB=0;RPB=0.179506;SGB=88.5747;VDB=0.467015;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L766|1688|LOC_Os05g28900|protein_coding|CODING|LOC_Os05g28900.1|3|1) FN3476-S.SNP.5:16940060 chr05:016940060 0 W/16940060-16940060 FN3476-S SNP T -> C AC=2;AN=184;BQB=0.923842;DP=3533;DP4=1697,1665,18,19;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0.158789;MQB=0.577308;MQSB=0;RPB=0.943297;SGB=120.271;VDB=0.486057;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L766|1688|LOC_Os05g28900|protein_coding|CODING|LOC_Os05g28900.1|3|1) FN2631-S.SNP.5:16943255 chr05:016943255 0 W/16943255-16943255 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.405246;DP=4539;DP4=1802,2385,14,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000440626;MQB=1.23398e-10;MQSB=0.943689;RPB=0.589061;SGB=141.763;VDB=0.96617;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.5:16947586 chr05:016947586 0 W/16947586-16947586 FN470-S Single Base Substitution C-A INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2739-S.SNP.5:16948751 chr05:016948751 0 W/16948751-16948751 FN2739-S SNP A -> G AC=1;AN=200;BQB=0.367459;DP=4778;DP4=2443,2050,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209293;MQB=5.54967e-10;MQSB=0.9562;RPB=0.243642;SGB=9.48993;VDB=0.21973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.5:16949862 chr05:016949862 0 W/16949862-16949862 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.394111;DP=3910;DP4=1953,1796,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00126214;MQSB=0.0632753;RPB=0.608844;SGB=21.559;VDB=0.23502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P255L|963|LOC_Os05g28920|protein_coding|CODING|LOC_Os05g28920.1|2|1) FN2455.SNP.5:16962033 chr05:016962033 0 W/16962033-16962033 FN2455 SNP G -> A AC=1;AN=200;BQB=0.544002;DP=3730;DP4=2201,1254,9,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.18574e-05;MQSB=0.00238895;RPB=0.921288;SGB=29.4849;VDB=0.38211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.5:16962608 chr05:016962608 0 W/16962608-16962608 FN2455 SNP C -> T AC=1;AN=200;BQB=0.353121;DP=3930;DP4=1984,1717,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.79899e-09;MQSB=0.977062;RPB=0.483386;SGB=32.0901;VDB=0.981378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.5:16963231 chr05:016963231 0 W/16963231-16963231 FN2323 SNP A -> G AC=1;AN=192;BQB=0.933986;DP=4916;DP4=2219,2450,11,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.65764e-16;MQSB=0.999271;RPB=0.951201;SGB=122.24;VDB=0.939558;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.5:16971454 chr05:016971454 0 W/16971454-16971454 FN461-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g28940 GTP-binding protein, putative, expressed SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3696-S.SNP.5:16979668 chr05:016979668 0 W/16979668-16979668 FN3696-S SNP G -> T AC=2;AN=190;BQB=0.979765;DP=2925;DP4=1388,1399,10,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.56359e-20;MQSB=0.770554;RPB=0.997976;SGB=110.732;VDB=0.4353;EFF=INTRON(MODIFIER||||404|LOC_Os05g28960|protein_coding|CODING|LOC_Os05g28960.1|4|1),INTRON(MODIFIER||||396|LOC_Os05g28960|protein_coding|CODING|LOC_Os05g28960.2|4|1) FN3598-S.SNP.5:16994440 chr05:016994440 0 W/16994440-16994440 FN3598-S SNP C -> T AC=2;AN=188;BQB=0.53346;DP=3065;DP4=1591,1349,21,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.70523e-18;MQSB=0.948883;RPB=0.442922;SGB=128.11;VDB=0.106739;EFF=UTR_5_PRIME(MODIFIER||558||224|LOC_Os05g28980|protein_coding|CODING|LOC_Os05g28980.3|1|1) FN1152-S.SNP.5:17001875 chr05:017001875 0 W/17001875-17001875 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN4021-S.SNP.5:17002172 chr05:017002172 0 W/17002172-17002172 FN4021-S SNP G -> A AC=1;AN=168;BQB=0.973085;DP=1939;DP4=1405,457,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05775e-05;MQSB=0.559805;RPB=0.995607;SGB=30.0193;VDB=0.828595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.5:17002212 chr05:017002212 0 W/17002212-17002212 FN3840-S SNP G -> T AC=1;AN=190;BQB=0.978368;DP=2210;DP4=1518,601,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96103e-07;MQSB=0.679944;RPB=0.197137;SGB=28.9929;VDB=0.104579;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.5:17002705 chr05:017002705 0 W/17002705-17002705 FN-65 Single Base Substitution A-G INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. CW-631-3-1.SNP.5:17005141 chr05:017005141 0 W/17005141-17005141 CW-631-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1482-S.SNP.5:17006099 chr05:017006099 0 W/17006099-17006099 FN1482-S Single Base Substitution T-C INTERGENIC Homo SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1320-S.SNP.5:17013722 chr05:017013722 0 W/17013722-17013722 FN1320-S Single Base Substitution T-C INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN809-S.SNP.5:17013788 chr05:017013788 0 W/17013788-17013788 FN809-S Single Base Substitution C-T INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. W554-1-1.SNP.5:17016823 chr05:017016823 0 W/17016823-17016823 W554-1-1 Single Base Substitution G-C INTRON HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN579-S.SNP.5:17022420 chr05:017022420 0 W/17022420-17022420 FN579-S Single Base Substitution T-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN447-S.SNP.5:17045226 chr05:017045226 0 W/17045226-17045226 FN447-S Single Base Substitution G-A INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN-330.SNP.5:17048812 chr05:017048812 0 W/17048812-17048812 FN-330 Single Base Substitution T-C INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN4231-S.SNP.5:17052033 chr05:017052033 0 W/17052033-17052033 FN4231-S SNP T -> A AC=1;AN=170;BQB=0.986346;DP=2564;DP4=1324,1151,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.11692e-12;MQSB=0.980486;RPB=0.318887;SGB=78.9707;VDB=0.181863;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K889*|934|LOC_Os05g29050|protein_coding|CODING|LOC_Os05g29050.1|19|1),STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K1119*|1164|LOC_Os05g29050|protein_coding|CODING|LOC_Os05g29050.2|21|1) FN1596-S.SNP.5:17052612 chr05:017052612 0 W/17052612-17052612 FN1596-S Single Base Substitution C-T INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN320-S.SNP.5:17052730 chr05:017052730 0 W/17052730-17052730 FN320-S Single Base Substitution A-G INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN734-S.SNP.5:17054136 chr05:017054136 0 W/17054136-17054136 FN734-S Single Base Substitution A-C INTRON HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. W721-2-1.SNP.5:17055059 chr05:017055059 0 W/17055059-17055059 W721-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN1402-S.SNP.5:17063136 chr05:017063136 0 W/17063136-17063136 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. W475-4-2.SNP.5:17063378 chr05:017063378 0 W/17063378-17063378 W475-4-2 Single Base Substitution C-T INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN4078-S.SNP.5:17074159 chr05:017074159 0 W/17074159-17074159 FN4078-S SNP T -> G AC=2;AN=182;BQB=0.765094;DP=2794;DP4=1522,1172,16,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.35061e-18;MQSB=0.999876;RPB=0.942753;SGB=129.818;VDB=0.127173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.5:17092956 chr05:017092956 0 W/17092956-17092956 FN2791-S SNP T -> G AC=1;AN=198;BQB=0.991972;DP=4357;DP4=2155,2020,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.01048e-14;MQSB=0.998405;RPB=0.794516;SGB=79.6954;VDB=0.0954443;EFF=INTRON(MODIFIER||||1573|LOC_Os05g29110|protein_coding|CODING|LOC_Os05g29110.1|5|1) FN3725-S.SNP.5:17094520 chr05:017094520 0 W/17094520-17094520 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.967429;DP=2996;DP4=1502,1400,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.1686e-06;MQSB=0.973031;RPB=0.69735;SGB=28.9929;VDB=0.617745;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A904|1573|LOC_Os05g29110|protein_coding|CODING|LOC_Os05g29110.1|4|1) FN1433-S.SNP.5:17100762 chr05:017100762 0 W/17100762-17100762 FN1433-S Single Base Substitution G-A INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1525-S.SNP.5:17100892 chr05:017100892 0 W/17100892-17100892 FN1525-S Single Base Substitution C-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2160-S.SNP.5:17103577 chr05:017103577 0 W/17103577-17103577 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.111144;DP=2995;DP4=1987,960,20,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.56114e-05;MQSB=0.0228741;RPB=0.902424;SGB=-130.056;VDB=0.579093;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.5:17106249 chr05:017106249 0 W/17106249-17106249 FN661-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g29120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN3764-S.SNP.5:17119202 chr05:017119202 0 W/17119202-17119202 FN3764-S SNP G -> A AC=1;AN=190;BQB=0.778729;DP=2990;DP4=1585,1325,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000668896;MQB=5.21363e-06;MQSB=0.873688;RPB=0.987179;SGB=44.5415;VDB=0.502759;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P657|728|LOC_Os05g29130|protein_coding|CODING|LOC_Os05g29130.1|3|1) FN3331-S.SNP.5:17122177 chr05:017122177 0 W/17122177-17122177 FN3331-S SNP G -> C AC=1;AN=184;BQB=0.993694;DP=2876;DP4=1420,1363,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.30491e-08;MQSB=0.375181;RPB=0.710766;SGB=62.3078;VDB=0.502859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M16I|1015|LOC_Os05g29140|protein_coding|CODING|LOC_Os05g29140.1|1|1) FN1120-S.SNP.5:17126557 chr05:017126557 0 W/17126557-17126557 FN1120-S Single Base Substitution C-T INTERGENIC HOMO SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1065-S.SNP.5:17127002 chr05:017127002 0 W/17127002-17127002 FN1065-S Single Base Substitution A-G INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1345-S.SNP.5:17131250 chr05:017131250 0 W/17131250-17131250 FN1345-S Single Base Substitution A-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1211-S.SNP.5:17134213 chr05:017134213 0 W/17134213-17134213 FN1211-S Single Base Substitution T-C INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN708-S.SNP.5:17136128 chr05:017136128 0 W/17136128-17136128 FN708-S Single Base Substitution T-C INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1412-S.SNP.5:17137151 chr05:017137151 0 W/17137151-17137151 FN1412-S Single Base Substitution C-T INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2721-S.SNP.5:17137151 chr05:017137151 0 W/17137151-17137151 FN2721-S SNP C -> T AC=2;AN=200;BQB=0.340896;DP=4275;DP4=2034,1973,17,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.50772e-11;MQSB=0.00432142;RPB=0.878011;SGB=38.383;VDB=0.73066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.5:17143876 chr05:017143876 0 W/17143876-17143876 FN1136-19-S Single Base Substitution C-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3372-S.SNP.5:17146693 chr05:017146693 0 W/17146693-17146693 FN3372-S SNP T -> C AC=1;AN=184;BQB=0.984474;DP=2158;DP4=969,1114,3,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000349846;MQSB=0.852945;RPB=0.965925;SGB=21.6146;VDB=0.397713;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.5:17147960 chr05:017147960 0 W/17147960-17147960 FN-176 Single Base Substitution A-G INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN1261-S.SNP.5:17151113 chr05:017151113 0 W/17151113-17151113 FN1261-S Single Base Substitution T-G INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN4221-S.SNP.5:17155133 chr05:017155133 0 W/17155133-17155133 FN4221-S SNP G -> A AC=2;AN=170;BQB=0.837822;DP=2641;DP4=1336,1219,12,13;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=2.06245e-14;MQSB=0.112538;RPB=0.297575;SGB=105.627;VDB=0.846039;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.5:17156641 chr05:017156641 0 W/17156641-17156641 FN2213-S SNP A -> C AC=1;AN=190;BQB=0.761518;DP=4339;DP4=1525,2484,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.89628e-12;MQSB=0.999745;RPB=0.790448;SGB=-37.6628;VDB=0.064415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.5:17157330 chr05:017157330 0 W/17157330-17157330 FN1282-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. CW-631-3-1.SNP.5:17161563 chr05:017161563 0 W/17161563-17161563 CW-631-3-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1453-S.SNP.5:17161912 chr05:017161912 0 W/17161912-17161912 FN1453-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN594-S.SNP.5:17164970 chr05:017164970 0 W/17164970-17164970 FN594-S Single Base Substitution A-G INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3856-S.SNP.5:17164999 chr05:017164999 0 W/17164999-17164999 FN3856-S SNP C -> A AC=2;AN=158;BQB=0.982399;DP=2660;DP4=1390,1168,11,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.88282e-09;MQSB=0.85648;RPB=0.300497;SGB=64.5449;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-23.SNP.5:17165860 chr05:017165860 0 W/17165860-17165860 FN-23 Single Base Substitution G-C INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN776-S.SNP.5:17172579 chr05:017172579 0 W/17172579-17172579 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1488-S.SNP.5:17176745 chr05:017176745 0 W/17176745-17176745 FN1488-S Single Base Substitution C-A UTR_3_PRIME Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN429-S.SNP.5:17177457 chr05:017177457 0 W/17177457-17177457 FN429-S Single Base Substitution C-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1241-S.SNP.5:17180044 chr05:017180044 0 W/17180044-17180044 FN1241-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1256-S.SNP.5:17180044 chr05:017180044 0 W/17180044-17180044 FN1256-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1483-S.SNP.5:17181074 chr05:017181074 0 W/17181074-17181074 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1493-S.SNP.5:17183195 chr05:017183195 0 W/17183195-17183195 FN1493-S Single Base Substitution T-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2587-S.SNP.5:17193049 chr05:017193049 0 W/17193049-17193049 FN2587-S SNP T -> A AC=1;AN=198;BQB=0.985732;DP=4128;DP4=1766,2154,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.98181e-15;MQSB=0.00476969;RPB=0.998337;SGB=30.086;VDB=0.18845;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.5:17195471 chr05:017195471 0 W/17195471-17195471 FN969-S Single Base Substitution G-A INTRON HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2408.SNP.5:17196263 chr05:017196263 0 W/17196263-17196263 FN2408 SNP G -> A AC=1;AN=200;BQB=0.0368072;DP=4856;DP4=2238,2308,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47379e-06;MQSB=0.518869;RPB=0.0506358;SGB=-13.7154;VDB=0.495598;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.5:17207980 chr05:017207980 0 W/17207980-17207980 FN4039-S SNP G -> A AC=1;AN=168;BQB=0.990392;DP=2609;DP4=1126,1401,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.96859e-05;MQSB=0.0215613;RPB=0.383008;SGB=52.1728;VDB=0.984833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.5:17209418 chr05:017209418 0 W/17209418-17209418 FN3992-S SNP G -> T AC=2;AN=168;BQB=0.871995;DP=2654;DP4=1170,1303,15,12;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.33658e-09;MQSB=0.985604;RPB=0.867499;SGB=82.7794;VDB=0.417079;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.5:17214284 chr05:017214284 0 W/17214284-17214284 FN903-S Single Base Substitution T-A INTRON HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1142-S.SNP.5:17222661 chr05:017222661 0 W/17222661-17222661 FN1142-S Single Base Substitution A-G INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN-353.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN-353 Single Base Substitution A-T INTERGENIC HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1027-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN1027-S Single Base Substitution A-T INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1638-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN1638-S Single Base Substitution A-T INTERGENIC Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3377-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN3377-S SNP A -> T AC=1;AN=184;BQB=0.950196;DP=2483;DP4=1043,1369,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.48621e-05;MQSB=0.0579313;RPB=0.917942;SGB=28.7043;VDB=0.367739;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN3562-S SNP A -> T AC=1;AN=188;BQB=0.477426;DP=2343;DP4=980,1308,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=5.76521e-05;MQSB=0.824962;RPB=0.99509;SGB=39.5276;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN3652-S SNP A -> T AC=2;AN=190;BQB=0.996809;DP=2455;DP4=1049,1333,12,11;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=3.96638e-10;MQSB=0.178689;RPB=0.4919;SGB=99.1879;VDB=0.0539525;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.5:17227409 chr05:017227409 0 W/17227409-17227409 FN4043-S SNP A -> T AC=2;AN=168;BQB=0.571844;DP=2338;DP4=1032,1223,11,24;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.96157e-11;MQSB=0.524889;RPB=0.931756;SGB=149.651;VDB=0.627896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.5:17232743 chr05:017232743 0 W/17232743-17232743 FN3282-S SNP G -> A AC=2;AN=184;BQB=0.565108;DP=3564;DP4=1607,1864,11,9;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0;MQB=0.247872;MQSB=4.43792e-05;RPB=0.938194;SGB=84.9167;VDB=0.554443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A708T|1010|LOC_Os05g29780|protein_coding|CODING|LOC_Os05g29780.1|4|1) W475-4-2.SNP.5:17232743 chr05:017232743 0 W/17232743-17232743 W475-4-2 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g29780 retrotransposon protein, putative, unclassified, expressed SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN2349.SNP.5:17245896 chr05:017245896 0 W/17245896-17245896 FN2349 SNP T -> A AC=1;AN=192;BQB=0.810871;DP=4524;DP4=2022,2273,6,15;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=7.65909e-11;MQSB=0.882862;RPB=0.964115;SGB=13.6122;VDB=0.67531;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.5:17247020 chr05:017247020 0 W/17247020-17247020 FN833-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN626-S.SNP.5:17249316 chr05:017249316 0 W/17249316-17249316 FN626-S Single Base Substitution A-T INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2436.SNP.5:17250879 chr05:017250879 0 W/17250879-17250879 FN2436 SNP C -> G AC=1;AN=200;BQB=0.998691;DP=4505;DP4=2256,1903,17,15;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0;MQB=8.72736e-09;MQSB=0.000293417;RPB=0.999979;SGB=68.5625;VDB=0.13267;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.5:17254217 chr05:017254217 0 W/17254217-17254217 FN986-S Single Base Substitution T-C INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN4065-S.SNP.5:17258016 chr05:017258016 0 W/17258016-17258016 FN4065-S SNP G -> A AC=2;AN=168;BQB=0.876352;DP=2562;DP4=1170,1273,13,9;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=1.70566e-11;MQSB=0.217209;RPB=0.939662;SGB=39.2004;VDB=0.59716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.5:17263671 chr05:017263671 0 W/17263671-17263671 FN2592-S SNP C -> T AC=2;AN=198;BQB=0.000214556;DP=4351;DP4=1951,1889,14,8;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.0140198;MQB=7.73709e-08;MQSB=0.405372;RPB=0.807875;SGB=-170.401;VDB=0.999999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.5:17264713 chr05:017264713 0 W/17264713-17264713 FN2498 SNP T -> C AC=1;AN=200;BQB=0.951493;DP=2369;DP4=652,1410,4,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000534138;MQSB=4.79246e-08;RPB=0.989786;SGB=22.2439;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.5:17273523 chr05:017273523 0 W/17273523-17273523 FN2546-S SNP T -> G AC=1;AN=198;BQB=0.947802;DP=3914;DP4=1886,1851,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.51453e-08;MQSB=0.741623;RPB=0.98489;SGB=54.144;VDB=0.354017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aCa|K361T|1098|LOC_Os05g29850|protein_coding|CODING|LOC_Os05g29850.1|2|1) FN2646-S.SNP.5:17273591 chr05:017273591 0 W/17273591-17273591 FN2646-S SNP G -> A AC=1;AN=200;BQB=0.853761;DP=4564;DP4=2203,2113,9,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00635408;MQB=6.12099e-08;MQSB=0.999649;RPB=0.922241;SGB=58.8698;VDB=0.513919;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S338|1098|LOC_Os05g29850|protein_coding|CODING|LOC_Os05g29850.1|2|1) FN3452-S.SNP.5:17273640 chr05:017273640 0 W/17273640-17273640 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.994332;DP=3018;DP4=1411,1473,5,17;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00397614;MQB=2.51827e-10;MQSB=0.000124151;RPB=0.365814;SGB=-171.203;VDB=0.101272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R322Q|1098|LOC_Os05g29850|protein_coding|CODING|LOC_Os05g29850.1|2|1) FN456-S.SNP.5:17276253 chr05:017276253 0 W/17276253-17276253 FN456-S Single Base Substitution T-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2673-S.SNP.5:17284382 chr05:017284382 0 W/17284382-17284382 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.876187;DP=4782;DP4=2304,2126,9,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000418235;MQB=1.11052e-08;MQSB=0.0239475;RPB=0.767913;SGB=15.9106;VDB=0.429534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F237S|250|LOC_Os05g29870|protein_coding|CODING|LOC_Os05g29870.1|2|1) FN2480.SNP.5:17295486 chr05:017295486 0 W/17295486-17295486 FN2480 SNP A -> G AC=1;AN=200;BQB=0.891286;DP=4182;DP4=1862,2100,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08191e-07;MQSB=0.989433;RPB=0.950284;SGB=63.4749;VDB=0.816693;EFF=INTRON(MODIFIER||||465|LOC_Os05g29880|protein_coding|CODING|LOC_Os05g29880.2|15|1),INTRON(MODIFIER||||724|LOC_Os05g29880|protein_coding|CODING|LOC_Os05g29880.3|14|1) FN3311-S.SNP.5:17301474 chr05:017301474 0 W/17301474-17301474 FN3311-S SNP A -> G AC=1;AN=184;BQB=0.596066;DP=3110;DP4=1414,1490,5,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07573e-08;MQSB=0.483293;RPB=0.755958;SGB=-13.1487;VDB=0.71227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.5:17311918 chr05:017311918 0 W/17311918-17311918 FN1068-S Single Base Substitution C-A INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN491-S.SNP.5:17315459 chr05:017315459 0 W/17315459-17315459 FN491-S Single Base Substitution C-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN4182-S.SNP.5:17324905 chr05:017324905 0 W/17324905-17324905 FN4182-S SNP T -> A AC=2;AN=170;BQB=0.861245;DP=2635;DP4=1302,1231,10,8;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0;MQB=0.177621;MQSB=0.768722;RPB=0.898591;SGB=52.0913;VDB=0.83707;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.5:17332862 chr05:017332862 0 W/17332862-17332862 FN3916-S SNP A -> G AC=1;AN=158;BQB=0.624556;DP=2461;DP4=1166,1216,16,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.75763e-12;MQSB=0.999302;RPB=0.219728;SGB=86.3921;VDB=0.931556;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.5:17341738 chr05:017341738 0 W/17341738-17341738 FN4182-S SNP A -> T AC=2;AN=170;BQB=0.94863;DP=2548;DP4=1200,1225,9,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.72177e-12;MQSB=0.9942;RPB=0.957862;SGB=44.3104;VDB=0.824871;EFF=INTRON(MODIFIER||||351|LOC_Os05g29974|protein_coding|CODING|LOC_Os05g29974.1|4|1),INTRON(MODIFIER||||233|LOC_Os05g29974|protein_coding|CODING|LOC_Os05g29974.2|4|1) FN721-S.SNP.5:17346573 chr05:017346573 0 W/17346573-17346573 FN721-S Single Base Substitution C-G INTRON HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2794-S.SNP.5:17348932 chr05:017348932 0 W/17348932-17348932 FN2794-S SNP T -> C AC=1;AN=198;BQB=0.626523;DP=4361;DP4=1952,2179,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16947e-13;MQSB=0.999998;RPB=0.382183;SGB=68.91;VDB=0.118371;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.5:17350140 chr05:017350140 0 W/17350140-17350140 FN579-S Single Base Substitution G-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN864-S.SNP.5:17382958 chr05:017382958 0 W/17382958-17382958 FN864-S Single Base Substitution C-T INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3396-S.SNP.5:17385716 chr05:017385716 0 W/17385716-17385716 FN3396-S SNP C -> T AC=1;AN=184;BQB=0.837806;DP=4030;DP4=1870,2067,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00868486;MQB=0.493688;MQSB=0.427684;RPB=0.475834;SGB=23.2751;VDB=0.293848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.5:17387404 chr05:017387404 0 W/17387404-17387404 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.929207;DP=4866;DP4=2535,2224,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.147143;MQB=0.972587;MQSB=1.19075e-40;RPB=0.977801;SGB=76.2387;VDB=0.442372;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A157|465|LOC_Os05g30050|protein_coding|CODING|LOC_Os05g30050.1|1|1) FN1290-S.SNP.5:17391340 chr05:017391340 0 W/17391340-17391340 FN1290-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g30060 retrotransposon protein, putative, unclassified, expressed SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1318-S.SNP.5:17393393 chr05:017393393 0 W/17393393-17393393 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1255-S.SNP.5:17393812 chr05:017393812 0 W/17393812-17393812 FN1255-S Single Base Substitution C-T INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1496-S.SNP.5:17393812 chr05:017393812 0 W/17393812-17393812 FN1496-S Single Base Substitution C-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1517-S.SNP.5:17393812 chr05:017393812 0 W/17393812-17393812 FN1517-S Single Base Substitution C-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2415.SNP.5:17393812 chr05:017393812 0 W/17393812-17393812 FN2415 SNP C -> T AC=1;AN=200;BQB=0.180147;DP=5124;DP4=2582,2150,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.10994e-11;MQSB=0.244399;RPB=0.0806693;SGB=69.1109;VDB=0.341793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.5:17394022 chr05:017394022 0 W/17394022-17394022 FN3286-S SNP C -> G AC=1;AN=184;BQB=0.931643;DP=3736;DP4=1739,1904,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.55259e-12;MQSB=0.999602;RPB=0.578352;SGB=89.4385;VDB=0.216827;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.5:17394550 chr05:017394550 0 W/17394550-17394550 FN2667-S SNP T -> C AC=2;AN=200;BQB=0.91256;DP=4603;DP4=2184,2154,23,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00021725;MQB=1.00463e-23;MQSB=0.99391;RPB=0.94732;SGB=112.85;VDB=0.519723;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T1432A|1509|LOC_Os05g30070|protein_coding|CODING|LOC_Os05g30070.1|6|1) FN-202.SNP.5:17407639 chr05:017407639 0 W/17407639-17407639 FN-202 Single Base Substitution A-T INTERGENIC HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. W463-2-1.SNP.5:17411746 chr05:017411746 0 W/17411746-17411746 W463-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g30090 retrotransposon protein, putative, unclassified, expressed SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2372.SNP.5:17417524 chr05:017417524 0 W/17417524-17417524 FN2372 SNP T -> C AC=1;AN=192;BQB=0.962214;DP=4535;DP4=1922,2050,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.34274e-15;MQSB=0.777314;RPB=0.944899;SGB=22.9983;VDB=0.365625;EFF=INTRON(MODIFIER||||3007|LOC_Os05g30090|protein_coding|CODING|LOC_Os05g30090.1|12|1) FN730-S.SNP.5:17426250 chr05:017426250 0 W/17426250-17426250 FN730-S Single Base Substitution C-T INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN2372.SNP.5:17430373 chr05:017430373 0 W/17430373-17430373 FN2372 SNP C -> G AC=1;AN=192;BQB=0.875219;DP=4921;DP4=2470,2045,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.17728e-14;MQSB=0.953442;RPB=0.0489905;SGB=51.9931;VDB=0.0484267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-23.SNP.5:17434547 chr05:017434547 0 W/17434547-17434547 FN-23 Single Base Substitution A-T INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN1420-S.SNP.5:17435107 chr05:017435107 0 W/17435107-17435107 FN1420-S Single Base Substitution C-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2097-S.SNP.5:17435636 chr05:017435636 0 W/17435636-17435636 FN2097-S SNP T -> A AC=1;AN=168;BQB=0.55902;DP=4096;DP4=2069,1974,17,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.43944e-10;MQSB=0.925378;RPB=0.718115;SGB=-13.2184;VDB=0.0328884;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.5:17441827 chr05:017441827 0 W/17441827-17441827 FN-356 Single Base Substitution C-T UTR_3_PRIME HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2767-S.SNP.5:17443722 chr05:017443722 0 W/17443722-17443722 FN2767-S SNP T -> C AC=2;AN=198;BQB=0.872241;DP=4334;DP4=1943,2157,18,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.16032e-24;MQSB=0.868099;RPB=0.919525;SGB=102.008;VDB=0.280198;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E120|367|LOC_Os05g30130|protein_coding|CODING|LOC_Os05g30130.1|2|1) FN441-S.SNP.5:17448909 chr05:017448909 0 W/17448909-17448909 FN441-S Single Base Substitution G-A INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3576-S.SNP.5:17449612 chr05:017449612 0 W/17449612-17449612 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.833699;DP=2784;DP4=1386,1310,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.12943e-09;MQSB=0.76213;RPB=0.408453;SGB=67.1521;VDB=0.38248;EFF=INTRON(MODIFIER||||294|LOC_Os05g30140|protein_coding|CODING|LOC_Os05g30140.1|3|1),INTRON(MODIFIER||||287|LOC_Os05g30140|protein_coding|CODING|LOC_Os05g30140.2|3|1) FN-42.SNP.5:17458875 chr05:017458875 0 W/17458875-17458875 FN-42 Single Base Substitution C-T INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-42.SNP.5:17458888 chr05:017458888 0 W/17458888-17458888 FN-42 Single Base Substitution A-T INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2460.SNP.5:17461246 chr05:017461246 0 W/17461246-17461246 FN2460 SNP G -> A AC=1;AN=200;BQB=0.0598106;DP=5140;DP4=2578,2288,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45791e-06;MQSB=0.961764;RPB=0.646677;SGB=33.0593;VDB=0.205941;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.5:17465466 chr05:017465466 0 W/17465466-17465466 FN4113-S SNP A -> G AC=2;AN=180;BQB=0.782598;DP=1363;DP4=1286,11,22,0;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0.000733676;MQB=2.62407e-11;MQSB=0.969428;RPB=0.991315;SGB=74.5431;VDB=0.230937;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.5:17467750 chr05:017467750 0 W/17467750-17467750 FN4178-S SNP A -> G AC=1;AN=170;BQB=0.860325;DP=2405;DP4=1215,1105,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.5481e-09;MQSB=0.772992;RPB=0.720981;SGB=56.7575;VDB=0.390914;EFF=INTRON(MODIFIER||||272|LOC_Os05g30150|protein_coding|CODING|LOC_Os05g30150.1|2|1) FN2174-S.SNP.5:17468715 chr05:017468715 0 W/17468715-17468715 FN2174-S SNP C -> A AC=1;AN=168;BQB=0.088104;DP=3871;DP4=2063,1765,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000516662;MQB=4.50758e-10;MQSB=0.933335;RPB=0.562834;SGB=36.7696;VDB=0.737196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.5:17469388 chr05:017469388 0 W/17469388-17469388 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN2141-S.SNP.5:17469388 chr05:017469388 0 W/17469388-17469388 FN2141-S SNP C -> T AC=2;AN=168;BQB=0.0159485;DP=3897;DP4=1714,2093,30,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.75468e-22;MQSB=0.900551;RPB=0.825618;SGB=-116.713;VDB=0.200746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.5:17470531 chr05:017470531 0 W/17470531-17470531 FN2182-S SNP T -> A AC=1;AN=190;BQB=0.960627;DP=5553;DP4=2907,2229,16,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.49905e-19;MQSB=0.806108;RPB=0.941277;SGB=-3.80607;VDB=0.204008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.5:17472787 chr05:017472787 0 W/17472787-17472787 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.815019;DP=4498;DP4=2214,1935,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.09917e-09;MQSB=0.913679;RPB=0.58527;SGB=26.7492;VDB=0.22877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.5:17476984 chr05:017476984 0 W/17476984-17476984 FN3450-S SNP A -> G AC=1;AN=184;BQB=0.915297;DP=3291;DP4=1810,1312,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.05053e-05;MQSB=0.929523;RPB=0.176188;SGB=26.1347;VDB=0.0536474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.5:17477547 chr05:017477547 0 W/17477547-17477547 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.572825;DP=4495;DP4=1972,2208,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.91069e-13;MQSB=0.289666;RPB=0.95896;SGB=83.2905;VDB=0.0692288;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.5:17479434 chr05:017479434 0 W/17479434-17479434 FN-132 Single Base Substitution G-A INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN3389-S.SNP.5:17480721 chr05:017480721 0 W/17480721-17480721 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.910172;DP=2949;DP4=1387,1432,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68841e-11;MQSB=0.850474;RPB=0.75216;SGB=75.8731;VDB=0.730927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.5:17481253 chr05:017481253 0 W/17481253-17481253 FN3534-S SNP G -> C AC=2;AN=188;BQB=0.99391;DP=2489;DP4=1153,1246,10,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.65262e-15;MQSB=0.979696;RPB=0.599878;SGB=51.5091;VDB=0.911042;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.5:17487617 chr05:017487617 0 W/17487617-17487617 FN2788-S SNP T -> A AC=1;AN=198;BQB=0.9366;DP=4715;DP4=2402,2071,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.134252;MQB=0.183106;MQSB=9.28282e-09;RPB=0.934673;SGB=54.5295;VDB=0.0473136;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N66Y|554|LOC_Os05g30170|protein_coding|CODING|LOC_Os05g30170.1|1|1) FN2196-S.SNP.5:17487775 chr05:017487775 0 W/17487775-17487775 FN2196-S SNP G -> C AC=2;AN=190;BQB=0.836265;DP=4954;DP4=2176,2326,24,31;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.0329027;MQB=0.417158;MQSB=1.30974e-13;RPB=0.265163;SGB=185.363;VDB=0.368748;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P13R|554|LOC_Os05g30170|protein_coding|CODING|LOC_Os05g30170.1|1|1) FN3596-S.SNP.5:17492182 chr05:017492182 0 W/17492182-17492182 FN3596-S SNP C -> T AC=1;AN=188;BQB=0.8058;DP=2805;DP4=1322,1312,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06234e-07;MQSB=0.892671;RPB=0.396085;SGB=28.8977;VDB=0.244899;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.5:17494853 chr05:017494853 0 W/17494853-17494853 FN441-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g30180 hypothetical protein SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3866-S.SNP.5:17498884 chr05:017498884 0 W/17498884-17498884 FN3866-S SNP G -> A AC=1;AN=158;BQB=0.978373;DP=2617;DP4=1267,1246,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.35192e-05;MQSB=0.813592;RPB=0.991256;SGB=33.9591;VDB=0.90234;EFF=UTR_3_PRIME(MODIFIER||280||353|LOC_Os05g30190|protein_coding|CODING|LOC_Os05g30190.1|1|1) FN2704-S.SNP.5:17504280 chr05:017504280 0 W/17504280-17504280 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.274742;DP=4765;DP4=2236,2284,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49257e-11;MQSB=0.999823;RPB=0.39693;SGB=72.6852;VDB=0.151918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:17506147 chr05:017506147 0 W/17506147-17506147 FN2572-S SNP G -> T AC=1;AN=198;BQB=0.857491;DP=4282;DP4=2090,1845,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.61392e-13;MQSB=0.979403;RPB=0.994214;SGB=60.4858;VDB=0.947584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:17506147 chr05:017506147 0 W/17506147-17506147 FN2572-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN-304.SNP.5:17507678 chr05:017507678 0 W/17507678-17507678 FN-304 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g30210 expressed protein SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN4050-S.SNP.5:17516622 chr05:017516622 0 W/17516622-17516622 FN4050-S SNP C -> G AC=1;AN=168;BQB=0.956947;DP=2913;DP4=1484,1316,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.82398e-15;MQSB=0.985292;RPB=0.612316;SGB=100.912;VDB=0.790112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M224I|876|LOC_Os05g30220|protein_coding|CODING|LOC_Os05g30220.1|2|1) FN1561-S.SNP.5:17516657 chr05:017516657 0 W/17516657-17516657 FN1561-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g30220 disease resistance RPP13-like protein 1, putative, expressed SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2278-S.SNP.5:17516806 chr05:017516806 0 W/17516806-17516806 FN2278-S SNP C -> A AC=1;AN=190;BQB=0.203701;DP=4766;DP4=2169,2368,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31774e-13;MQSB=0.34834;RPB=0.227823;SGB=67.0756;VDB=0.906559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S163I|876|LOC_Os05g30220|protein_coding|CODING|LOC_Os05g30220.1|2|1) FN684-S.SNP.5:17519333 chr05:017519333 0 W/17519333-17519333 FN684-S Single Base Substitution C-A INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN3946-S.SNP.5:17525153 chr05:017525153 0 W/17525153-17525153 FN3946-S SNP C -> G AC=2;AN=168;BQB=0.840677;DP=2517;DP4=1303,1123,18,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.69316e-13;MQSB=0.892338;RPB=0.999994;SGB=75.9177;VDB=0.863615;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q788E|911|LOC_Os05g30240|protein_coding|CODING|LOC_Os05g30240.1|1|1) FN3286-S.SNP.5:17533564 chr05:017533564 0 W/17533564-17533564 FN3286-S SNP T -> C AC=1;AN=184;BQB=0.934145;DP=2815;DP4=1515,1211,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.10698e-06;MQSB=0.979734;RPB=0.901253;SGB=21.6609;VDB=0.288493;EFF=SPLICE_SITE_REGION(LOW||||528|LOC_Os05g30250|protein_coding|CODING|LOC_Os05g30250.1|10|1),SPLICE_SITE_REGION(LOW||||504|LOC_Os05g30250|protein_coding|CODING|LOC_Os05g30250.2|9|1),INTRON(MODIFIER||||528|LOC_Os05g30250|protein_coding|CODING|LOC_Os05g30250.1|10|1),INTRON(MODIFIER||||504|LOC_Os05g30250|protein_coding|CODING|LOC_Os05g30250.2|9|1) FN1170-S.SNP.5:17534235 chr05:017534235 0 W/17534235-17534235 FN1170-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-22.SNP.5:17535487 chr05:017535487 0 W/17535487-17535487 FN-22 Single Base Substitution G-A INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN4047-S.SNP.5:17541222 chr05:017541222 0 W/17541222-17541222 FN4047-S SNP T -> G AC=1;AN=168;BQB=0.988397;DP=8080;DP4=3626,4169,18,8;HOB=7.08617e-05;ICB=0.000142567;MQ=15;MQ0F=0.387129;MQB=0.00105029;MQSB=6.90453e-11;RPB=0.630728;SGB=109.773;VDB=0.536245;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Cca|T1492P|1734|LOC_Os05g30270|protein_coding|CODING|LOC_Os05g30270.1|4|1) FN-390.SNP.5:17543233 chr05:017543233 0 W/17543233-17543233 FN-390 Single Base Substitution C-G INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-390.SNP.5:17543235 chr05:017543235 0 W/17543235-17543235 FN-390 Single Base Substitution G-T INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN975-S.SNP.5:17544124 chr05:017544124 0 W/17544124-17544124 FN975-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN692-S.SNP.5:17553893 chr05:017553893 0 W/17553893-17553893 FN692-S Single Base Substitution G-A INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2452.SNP.5:17555013 chr05:017555013 0 W/17555013-17555013 FN2452 SNP G -> T AC=1;AN=200;BQB=0.974427;DP=4760;DP4=2359,2144,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54519e-08;MQSB=0.787578;RPB=0.925254;SGB=63.4749;VDB=0.723986;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.5:17558346 chr05:017558346 0 W/17558346-17558346 FN230-S Single Base Substitution A-G INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN1211-S.SNP.5:17565761 chr05:017565761 0 W/17565761-17565761 FN1211-S Single Base Substitution T-C INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1406-S.SNP.5:17567579 chr05:017567579 0 W/17567579-17567579 FN1406-S Single Base Substitution A-G INTRON Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3330-S.SNP.5:17569160 chr05:017569160 0 W/17569160-17569160 FN3330-S SNP C -> T AC=2;AN=184;BQB=0.927847;DP=2931;DP4=1374,1421,9,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.79338e-18;MQSB=0.717933;RPB=0.753584;SGB=28.1074;VDB=0.494277;EFF=INTRON(MODIFIER||||424|LOC_Os05g30300|protein_coding|CODING|LOC_Os05g30300.1|5|1) FN2323.SNP.5:17578927 chr05:017578927 0 W/17578927-17578927 FN2323 SNP T -> C AC=2;AN=192;BQB=0.510886;DP=5136;DP4=2345,2418,34,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.259e-32;MQSB=0.996287;RPB=0.301054;SGB=254.606;VDB=0.204663;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G21|96|LOC_Os05g30320|protein_coding|CODING|LOC_Os05g30320.1|2|1) FN3916-S.SNP.5:17579643 chr05:017579643 0 W/17579643-17579643 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.962917;DP=2251;DP4=1029,1134,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.5898e-05;MQSB=0.847898;RPB=0.901183;SGB=25.2211;VDB=0.159342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.5:17581100 chr05:017581100 0 W/17581100-17581100 FN3677-S SNP G -> A AC=2;AN=190;BQB=0.990771;DP=2962;DP4=1212,1567,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.73602e-14;MQSB=0.88328;RPB=0.250138;SGB=117.403;VDB=0.397205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.5:17582513 chr05:017582513 0 W/17582513-17582513 FN2098-S SNP T -> C AC=1;AN=168;BQB=0.158218;DP=3156;DP4=1169,1948,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89754e-08;MQSB=0.961364;RPB=0.999805;SGB=-40.6433;VDB=0.831159;EFF=INTRON(MODIFIER||||462|LOC_Os05g30340|protein_coding|CODING|LOC_Os05g30340.1|1|1) FN3867-S.SNP.5:17583522 chr05:017583522 0 W/17583522-17583522 FN3867-S SNP A -> G AC=1;AN=158;BQB=0.859671;DP=2468;DP4=1076,1276,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.38999e-07;MQSB=0.556264;RPB=0.782176;SGB=-3.39162;VDB=0.0683228;EFF=INTRON(MODIFIER||||462|LOC_Os05g30340|protein_coding|CODING|LOC_Os05g30340.1|1|1),INTRON(MODIFIER||||462|LOC_Os05g30340|protein_coding|CODING|LOC_Os05g30340.2|1|1) FN1536-S.SNP.5:17596868 chr05:017596868 0 W/17596868-17596868 FN1536-S Single Base Substitution G-A INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-193.SNP.5:17602417 chr05:017602417 0 W/17602417-17602417 FN-193 Single Base Substitution T-A INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN851-S.SNP.5:17602417 chr05:017602417 0 W/17602417-17602417 FN851-S Single Base Substitution T-A INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN-16.SNP.5:17607842 chr05:017607842 0 W/17607842-17607842 FN-16 Single Base Substitution A-T UTR_3_PRIME Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN3950-S.SNP.5:17608686 chr05:017608686 0 W/17608686-17608686 FN3950-S SNP A -> C AC=1;AN=168;BQB=0.999753;DP=2537;DP4=1098,1283,21,14;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.016555;MQB=1.61011e-12;MQSB=0.579588;RPB=0.00288652;SGB=-441.722;VDB=0.0686567;EFF=INTRON(MODIFIER||||1082|LOC_Os05g30380|protein_coding|CODING|LOC_Os05g30380.1|2|1) FN849-S.SNP.5:17608965 chr05:017608965 0 W/17608965-17608965 FN849-S Single Base Substitution G-A INTRON HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3759-S.SNP.5:17635280 chr05:017635280 0 W/17635280-17635280 FN3759-S SNP C -> G AC=1;AN=190;BQB=0.97042;DP=2941;DP4=1329,1479,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70382e-06;MQSB=0.996667;RPB=0.98866;SGB=53.6492;VDB=0.957875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.5:17657890 chr05:017657890 0 W/17657890-17657890 FN1086-S Single Base Substitution C-T INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3678-S.SNP.5:17657924 chr05:017657924 0 W/17657924-17657924 FN3678-S SNP C -> A AC=1;AN=190;BQB=0.948911;DP=2494;DP4=1522,880,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40388e-07;MQSB=0.225038;RPB=0.920941;SGB=49.0954;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.5:17658641 chr05:017658641 0 W/17658641-17658641 FN999-S Single Base Substitution C-T INTERGENIC HOMO SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3421-S.SNP.5:17658659 chr05:017658659 0 W/17658659-17658659 FN3421-S SNP G -> A AC=2;AN=184;BQB=0.16967;DP=3007;DP4=1592,1262,16,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.34767e-13;MQSB=0.805252;RPB=0.965182;SGB=143.7;VDB=0.708702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.5:17677799 chr05:017677799 0 W/17677799-17677799 FN1724-S SNP C -> A AC=1;AN=188;BQB=0.590233;DP=2126;DP4=796,1290,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.46793e-08;MQSB=0.990804;RPB=0.973222;SGB=5.5382;VDB=0.564771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.5:17678705 chr05:017678705 0 W/17678705-17678705 FN-76 Single Base Substitution C-T INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-262.SNP.5:17683389 chr05:017683389 0 W/17683389-17683389 FN-262 Single Base Substitution C-A INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2656-S.SNP.5:17685142 chr05:017685142 0 W/17685142-17685142 FN2656-S SNP C -> G AC=2;AN=200;BQB=0.466969;DP=4703;DP4=2308,2146,45,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.80909e-45;MQSB=0.498785;RPB=0.0880831;SGB=304.408;VDB=0.0678239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.5:17690845 chr05:017690845 0 W/17690845-17690845 FN3848-S SNP A -> G AC=1;AN=158;BQB=0.999775;DP=2879;DP4=1429,1312,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.05144e-10;MQSB=0.825114;RPB=0.766936;SGB=64.3985;VDB=0.833904;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.5:17699980 chr05:017699980 0 W/17699980-17699980 FN2497 SNP G -> A AC=2;AN=200;BQB=0.9636;DP=3858;DP4=1207,2394,7,18;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00596164;MQB=1.58285e-09;MQSB=1.01414e-07;RPB=0.731989;SGB=109.527;VDB=0.925362;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L206|308|LOC_Os05g30540|protein_coding|CODING|LOC_Os05g30540.1|2|1) FN2387.SNP.5:17704500 chr05:017704500 0 W/17704500-17704500 FN2387 SNP C -> T AC=1;AN=192;BQB=0.409111;DP=5137;DP4=2708,2185,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194666;MQB=2.38094e-07;MQSB=0.272493;RPB=0.789932;SGB=23.7852;VDB=0.460996;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.5:17705465 chr05:017705465 0 W/17705465-17705465 FN4037-S SNP G -> A AC=1;AN=168;BQB=0.812355;DP=2931;DP4=1497,1304,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0375299;MQB=0.703347;MQSB=0.0586809;RPB=0.296582;SGB=83.1885;VDB=0.933948;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A528V|679|LOC_Os05g30560|protein_coding|CODING|LOC_Os05g30560.1|2|1) FN1304-S.SNP.5:17707437 chr05:017707437 0 W/17707437-17707437 FN1304-S Single Base Substitution G-A INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2118-S.SNP.5:17707760 chr05:017707760 0 W/17707760-17707760 FN2118-S SNP A -> G AC=2;AN=168;BQB=0.973142;DP=2219;DP4=1178,922,11,61;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00991438;MQB=3.30706e-43;MQSB=0.206777;RPB=0.00796101;SGB=-838.304;VDB=1.20183e-12;EFF=INTRON(MODIFIER||||679|LOC_Os05g30560|protein_coding|CODING|LOC_Os05g30560.1|1|1) FN969-S.SNP.5:17708186 chr05:017708186 0 W/17708186-17708186 FN969-S Single Base Substitution G-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2620-S.SNP.5:17711652 chr05:017711652 0 W/17711652-17711652 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.985031;DP=3893;DP4=1924,1793,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=5.89337e-16;MQSB=0.947332;RPB=0.747157;SGB=55.2955;VDB=0.133139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.5:17712755 chr05:017712755 0 W/17712755-17712755 FN2614-S SNP G -> A AC=2;AN=198;BQB=0.992255;DP=4021;DP4=1728,1950,15,23;HOB=0.019998;ICB=0.495001;MQ=40;MQ0F=0.0539667;MQB=0.0929539;MQSB=2.10195e-43;RPB=0.461367;SGB=169.022;VDB=0.276589;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.5:17713036 chr05:017713036 0 W/17713036-17713036 CW-631-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2403.SNP.5:17716771 chr05:017716771 0 W/17716771-17716771 FN2403 SNP C -> A AC=1;AN=200;BQB=0.0655629;DP=4574;DP4=2360,1843,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54629e-08;MQSB=0.614183;RPB=0.940889;SGB=24.2746;VDB=0.995155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.5:17723987 chr05:017723987 0 W/17723987-17723987 FN1746-S SNP C -> G AC=1;AN=188;BQB=0.370197;DP=1740;DP4=1060,617,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.99348e-05;MQSB=0.912021;RPB=0.648781;SGB=2.45162;VDB=0.498124;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.5:17728207 chr05:017728207 0 W/17728207-17728207 FN1565-S Single Base Substitution C-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN3893-S.SNP.5:17728407 chr05:017728407 0 W/17728407-17728407 FN3893-S SNP C -> T AC=1;AN=158;BQB=0.978521;DP=2725;DP4=1324,1321,12,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04138e-08;MQSB=0.944333;RPB=0.614544;SGB=44.1818;VDB=0.954018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.5:17731024 chr05:017731024 0 W/17731024-17731024 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.912871;DP=2903;DP4=1588,1293,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62498e-08;MQSB=0.967576;RPB=0.0640526;SGB=17.3231;VDB=0.159996;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1435|1591|LOC_Os05g30610|protein_coding|CODING|LOC_Os05g30610.1|6|1) FN-108.SNP.5:17731473 chr05:017731473 0 W/17731473-17731473 FN-108 Single Base Substitution T-A STOP_GAINED HET LOC_Os05g30610 retrotransposon protein, putative, unclassified, expressed SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3679-S.SNP.5:17736053 chr05:017736053 0 W/17736053-17736053 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.995408;DP=3003;DP4=1496,1412,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000333;MQB=3.15555e-11;MQSB=0.0134934;RPB=0.377314;SGB=60.9777;VDB=0.412585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E25K|1591|LOC_Os05g30610|protein_coding|CODING|LOC_Os05g30610.1|1|1) FN3652-S.SNP.5:17736843 chr05:017736843 0 W/17736843-17736843 FN3652-S SNP G -> A AC=1;AN=190;BQB=0.909485;DP=2293;DP4=1006,1182,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31095e-07;MQSB=0.850776;RPB=0.995039;SGB=21.1058;VDB=0.108008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.5:17737649 chr05:017737649 0 W/17737649-17737649 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.960015;DP=3340;DP4=1372,1897,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.83877e-06;MQSB=0.969109;RPB=0.635038;SGB=21.6609;VDB=0.707824;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.5:17739187 chr05:017739187 0 W/17739187-17739187 FN3359-S SNP G -> C AC=2;AN=184;BQB=0.901593;DP=2809;DP4=1321,1390,18,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76457e-15;MQSB=0.776558;RPB=0.85744;SGB=85.0529;VDB=0.938482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.5:17739522 chr05:017739522 0 W/17739522-17739522 FN3306-S SNP T -> C AC=1;AN=184;BQB=0.972851;DP=3210;DP4=1506,1570,1,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20948e-06;MQSB=0.927857;RPB=0.72809;SGB=25.1826;VDB=0.470678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.5:17741715 chr05:017741715 0 W/17741715-17741715 FN2331 SNP T -> A AC=1;AN=192;BQB=0.620605;DP=4279;DP4=1953,1844,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23821e-11;MQSB=0.158028;RPB=0.855974;SGB=-40.5556;VDB=0.941907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.5:17744757 chr05:017744757 0 W/17744757-17744757 FN2387 SNP A -> G AC=1;AN=192;BQB=0.999975;DP=4176;DP4=2232,1734,21,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.05491e-19;MQSB=0.884804;RPB=0.838333;SGB=145.062;VDB=0.160833;EFF=INTERGENIC(MODIFIER||||||||||1) FN-310.SNP.5:17749594 chr05:017749594 0 W/17749594-17749594 FN-310 Single Base Substitution C-T INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN3830-S.SNP.5:17749882 chr05:017749882 0 W/17749882-17749882 FN3830-S SNP T -> A AC=1;AN=190;BQB=0.974242;DP=2590;DP4=1200,1228,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.90341e-05;MQSB=0.984376;RPB=0.343059;SGB=39.9877;VDB=0.152536;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.5:17757064 chr05:017757064 0 W/17757064-17757064 FN628-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-281.SNP.5:17761251 chr05:017761251 0 W/17761251-17761251 FN-281 Single Base Substitution C-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1075-S.SNP.5:17768712 chr05:017768712 0 W/17768712-17768712 FN1075-S Single Base Substitution T-C INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN4247-S.SNP.5:17772781 chr05:017772781 0 W/17772781-17772781 FN4247-S SNP A -> G AC=1;AN=170;BQB=0.989711;DP=2062;DP4=1107,839,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.95418e-06;MQSB=0.956074;RPB=0.6576;SGB=21.1076;VDB=0.228571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.5:17772947 chr05:017772947 0 W/17772947-17772947 FN3701-S SNP G -> T AC=1;AN=190;BQB=0.927074;DP=2381;DP4=1391,923,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.42449e-07;MQSB=0.98329;RPB=0.280742;SGB=39.9877;VDB=0.253952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.5:17774816 chr05:017774816 0 W/17774816-17774816 FN3532-S SNP A -> G AC=1;AN=188;BQB=0.505049;DP=2857;DP4=1352,1403,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.47669e-10;MQSB=0.999102;RPB=0.52083;SGB=98.9552;VDB=0.722563;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.5:17781665 chr05:017781665 0 W/17781665-17781665 FN2692-S SNP G -> C AC=1;AN=200;BQB=0.735377;DP=4931;DP4=2454,2225,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.71475e-12;MQSB=0.923741;RPB=0.686047;SGB=91.1059;VDB=0.373458;EFF=UTR_3_PRIME(MODIFIER||429||373|LOC_Os05g30700|protein_coding|CODING|LOC_Os05g30700.1|2|1) FN3386-S.SNP.5:17785428 chr05:017785428 0 W/17785428-17785428 FN3386-S SNP C -> A AC=2;AN=184;BQB=0.957358;DP=3488;DP4=1722,1653,17,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.07691e-16;MQSB=0.985644;RPB=0.459932;SGB=139.178;VDB=0.306895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G69V|664|LOC_Os05g30710|protein_coding|CODING|LOC_Os05g30710.1|1|1) FN-235.SNP.5:17790378 chr05:017790378 0 W/17790378-17790378 FN-235 Single Base Substitution A-C INTRON HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3416-S.SNP.5:17795605 chr05:017795605 0 W/17795605-17795605 FN3416-S SNP T -> A AC=2;AN=184;BQB=0.998628;DP=2456;DP4=968,1344,5,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000407166;MQB=9.67887e-08;MQSB=0.0156421;RPB=0.858135;SGB=15.7097;VDB=0.112238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.5:17795608 chr05:017795608 0 W/17795608-17795608 FN3416-S SNP C -> T AC=2;AN=184;BQB=0.95398;DP=2469;DP4=979,1353,4,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000405022;MQB=9.21866e-07;MQSB=0.0312737;RPB=0.898645;SGB=25.1826;VDB=0.102407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.5:17795610 chr05:017795610 0 W/17795610-17795610 FN3416-S SNP C -> T AC=2;AN=184;BQB=0.989595;DP=2479;DP4=981,1350,3,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000403388;MQB=1.50836e-05;MQSB=0.0216061;RPB=0.998201;SGB=25.1826;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.5:17795727 chr05:017795727 0 W/17795727-17795727 FN1071-S Single Base Substitution A-T INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1037-S.SNP.5:17796154 chr05:017796154 0 W/17796154-17796154 FN1037-S Single Base Substitution C-T INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2637-S.SNP.5:17807760 chr05:017807760 0 W/17807760-17807760 FN2637-S SNP G -> T AC=1;AN=200;BQB=0.936841;DP=4349;DP4=2007,2071,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98468e-09;MQSB=0.817068;RPB=0.88481;SGB=68.0801;VDB=0.277209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.5:17817799 chr05:017817799 0 W/17817799-17817799 FN3538-S SNP G -> C AC=1;AN=188;BQB=0.964872;DP=3021;DP4=1262,1693,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.49924e-08;MQSB=0.991629;RPB=0.746127;SGB=48.979;VDB=0.737168;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.5:17821020 chr05:017821020 0 W/17821020-17821020 FN687-S Single Base Substitution A-C INTERGENIC HOMO SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2706-S.SNP.5:17828992 chr05:017828992 0 W/17828992-17828992 FN2706-S SNP G -> T AC=1;AN=200;BQB=0.70979;DP=5245;DP4=2799,2084,22,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04281e-19;MQSB=0.835516;RPB=0.40703;SGB=-84.8123;VDB=0.499202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.5:17829719 chr05:017829719 0 W/17829719-17829719 FN2482 SNP C -> T AC=2;AN=200;BQB=0.84069;DP=4422;DP4=1885,2206,8,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.82423e-14;MQSB=0.977246;RPB=0.989375;SGB=-39.2639;VDB=0.0768747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.5:17833199 chr05:017833199 0 W/17833199-17833199 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.578407;DP=5330;DP4=2751,2265,26,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85783e-24;MQSB=0.900652;RPB=0.266907;SGB=141.214;VDB=0.849626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.5:17836577 chr05:017836577 0 W/17836577-17836577 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.915307;DP=2905;DP4=1000,1696,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31899e-06;MQSB=0.734281;RPB=0.969855;SGB=21.6694;VDB=0.679222;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R105|287|LOC_Os05g30770|protein_coding|CODING|LOC_Os05g30770.1|2|1) FN939-S.SNP.5:17840492 chr05:017840492 0 W/17840492-17840492 FN939-S Single Base Substitution C-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN-245.SNP.5:17840811 chr05:017840811 0 W/17840811-17840811 FN-245 Single Base Substitution C-A INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1546-S.SNP.5:17840811 chr05:017840811 0 W/17840811-17840811 FN1546-S Single Base Substitution C-A INTERGENIC Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN3372-S.SNP.5:17840811 chr05:017840811 0 W/17840811-17840811 FN3372-S SNP C -> A AC=2;AN=184;BQB=0.906586;DP=3126;DP4=1380,1602,9,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.71503e-13;MQSB=0.947719;RPB=0.0495331;SGB=45.9712;VDB=0.00346239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.5:17844918 chr05:017844918 0 W/17844918-17844918 FN2719-S SNP C -> A AC=1;AN=200;BQB=0.8468;DP=5056;DP4=2206,2437,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000593354;MQB=1.59261e-10;MQSB=0.875188;RPB=0.960488;SGB=58.2954;VDB=0.635981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.5:17847683 chr05:017847683 0 W/17847683-17847683 FN1114-S Single Base Substitution C-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2353.SNP.5:17847811 chr05:017847811 0 W/17847811-17847811 FN2353 SNP A -> G AC=1;AN=192;BQB=0.878023;DP=5034;DP4=2374,2350,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.64791e-10;MQSB=0.914736;RPB=0.957431;SGB=76.5965;VDB=0.277406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.5:17848153 chr05:017848153 0 W/17848153-17848153 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.601684;DP=5130;DP4=2350,2529,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01717e-09;MQSB=0.89659;RPB=0.970665;SGB=54.6902;VDB=0.884044;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.5:17853922 chr05:017853922 0 W/17853922-17853922 FN997-S Single Base Substitution G-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3308-S.SNP.5:17857502 chr05:017857502 0 W/17857502-17857502 FN3308-S SNP C -> T AC=2;AN=184;BQB=0.977381;DP=2922;DP4=1629,1176,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.12368e-16;MQSB=0.845351;RPB=0.95728;SGB=116.569;VDB=0.774692;EFF=INTRON(MODIFIER||||1510|LOC_Os05g30790|protein_coding|CODING|LOC_Os05g30790.1|10|1) 703-3.SNP.5:17858986 chr05:017858986 0 W/17858986-17858986 703-3 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os05g30790 CW-type Zinc Finger, putative, expressed SNo: 1452, Mutant_ID: 703-3, Generation: M2, Mutations: 24, Genes: 38, Seed availability: Yes. FN2448.SNP.5:17868719 chr05:017868719 0 W/17868719-17868719 FN2448 SNP G -> C AC=2;AN=200;BQB=0.869278;DP=4446;DP4=2201,1967,17,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.6113e-18;MQSB=0.999873;RPB=0.321571;SGB=71.1676;VDB=0.663134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.5:17872102 chr05:017872102 0 W/17872102-17872102 FN1058-S Single Base Substitution C-T INTRON HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1027-S.SNP.5:17876066 chr05:017876066 0 W/17876066-17876066 FN1027-S Single Base Substitution A-G INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1282-S.SNP.5:17879767 chr05:017879767 0 W/17879767-17879767 FN1282-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3992-S.SNP.5:17887139 chr05:017887139 0 W/17887139-17887139 FN3992-S SNP C -> A AC=1;AN=168;BQB=0.624507;DP=2516;DP4=1299,1114,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.3815e-06;MQSB=0.73456;RPB=0.252782;SGB=-16.665;VDB=0.278414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G243W|378|LOC_Os05g30820|protein_coding|CODING|LOC_Os05g30820.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G243W|303|LOC_Os05g30820|protein_coding|CODING|LOC_Os05g30820.2|5|1) FN3842-S.SNP.5:17889296 chr05:017889296 0 W/17889296-17889296 FN3842-S SNP A -> G AC=2;AN=190;BQB=0.968701;DP=2592;DP4=1340,1032,17,9;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0740741;MQB=0.637304;MQSB=0.782918;RPB=0.953044;SGB=51.7524;VDB=0.879094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.5:17892135 chr05:017892135 0 W/17892135-17892135 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.837994;DP=2812;DP4=1285,1496,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.121977;MQB=0.965617;MQSB=0;RPB=0.249847;SGB=55.3328;VDB=0.456833;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T956M|1010|LOC_Os05g30830|protein_coding|CODING|LOC_Os05g30830.1|1|1) FN3545-S.SNP.5:17897157 chr05:017897157 0 W/17897157-17897157 FN3545-S SNP A -> T AC=1;AN=188;BQB=0.0050077;DP=3313;DP4=1852,859,89,61;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0259583;MQB=0;MQSB=0;RPB=0.0315764;SGB=-1652.66;VDB=9.11039e-36;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.5:17898416 chr05:017898416 0 W/17898416-17898416 FN1254-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1338-S.SNP.5:17903200 chr05:017903200 0 W/17903200-17903200 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4082-S.SNP.5:17905919 chr05:017905919 0 W/17905919-17905919 FN4082-S SNP A -> C AC=1;AN=182;BQB=0.921051;DP=2886;DP4=1451,1348,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.37511e-11;MQSB=0.697305;RPB=0.317759;SGB=75.6874;VDB=0.554093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.5:17906393 chr05:017906393 0 W/17906393-17906393 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.459902;DP=4822;DP4=2318,2244,5,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.42761e-13;MQSB=0.964522;RPB=0.625795;SGB=86.5007;VDB=0.994845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.5:17908519 chr05:017908519 0 W/17908519-17908519 FN2792-S SNP C -> A AC=1;AN=198;BQB=0.836591;DP=4072;DP4=2078,1679,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.18911e-08;MQSB=0.727805;RPB=0.993254;SGB=10.9445;VDB=0.619577;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.5:17919389 chr05:017919389 0 W/17919389-17919389 FN796-S Single Base Substitution C-T INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2313.SNP.5:17930218 chr05:017930218 0 W/17930218-17930218 FN2313 SNP C -> G AC=1;AN=192;BQB=0.682589;DP=5136;DP4=2418,2370,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.2387e-06;MQSB=0.67122;RPB=0.982434;SGB=-54.4513;VDB=0.354724;EFF=UTR_3_PRIME(MODIFIER||565||491|LOC_Os05g30870|protein_coding|CODING|LOC_Os05g30870.1|5|1),UTR_3_PRIME(MODIFIER||565||467|LOC_Os05g30870|protein_coding|CODING|LOC_Os05g30870.2|4|1),UTR_3_PRIME(MODIFIER||565||453|LOC_Os05g30870|protein_coding|CODING|LOC_Os05g30870.3|6|1) FN1606-S.SNP.5:17932767 chr05:017932767 0 W/17932767-17932767 FN1606-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g30880 nucleolar matrix protein-related, putative, expressed SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1184-S.SNP.5:17934442 chr05:017934442 0 W/17934442-17934442 FN1184-S Single Base Substitution A-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2481.SNP.5:17944150 chr05:017944150 0 W/17944150-17944150 FN2481 SNP A -> T AC=2;AN=200;BQB=0.931474;DP=4943;DP4=2477,2225,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21942e-20;MQSB=0.747437;RPB=0.756101;SGB=173.999;VDB=0.650719;EFF=INTRON(MODIFIER||||342|LOC_Os05g30900|protein_coding|CODING|LOC_Os05g30900.1|5|1) FN-235.SNP.5:17947904 chr05:017947904 0 W/17947904-17947904 FN-235 Single Base Substitution T-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3809-S.SNP.5:17963397 chr05:017963397 0 W/17963397-17963397 FN3809-S SNP T -> C AC=1;AN=190;BQB=0.982305;DP=2659;DP4=1148,1372,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.63884e-07;MQSB=0.999997;RPB=0.970583;SGB=13.4442;VDB=0.629917;EFF=INTRON(MODIFIER||||272|LOC_Os05g30940|protein_coding|CODING|LOC_Os05g30940.1|1|1) FN3592-S.SNP.5:17978883 chr05:017978883 0 W/17978883-17978883 FN3592-S SNP T -> C AC=1;AN=188;BQB=0.586548;DP=2763;DP4=1388,1089,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=5.26971e-07;MQSB=0.616069;RPB=0.57414;SGB=58.0655;VDB=0.21935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.5:17982400 chr05:017982400 0 W/17982400-17982400 FN1062-S Single Base Substitution C-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN4150-S.SNP.5:17990575 chr05:017990575 0 W/17990575-17990575 FN4150-S SNP C -> A AC=1;AN=170;BQB=0.478536;DP=2264;DP4=1185,1012,14,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.0583e-08;MQSB=0.815483;RPB=0.96282;SGB=58.9766;VDB=0.0103124;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.5:17990868 chr05:017990868 0 W/17990868-17990868 FN1057-S Single Base Substitution A-G INTERGENIC HOMO SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3837-S.SNP.5:17990868 chr05:017990868 0 W/17990868-17990868 FN3837-S SNP A -> G AC=1;AN=190;BQB=0.888452;DP=3006;DP4=1522,1284,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76566e-05;MQSB=0.929275;RPB=0.883798;SGB=8.33661;VDB=0.721112;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.5:17990868 chr05:017990868 0 W/17990868-17990868 FN4010-S SNP A -> G AC=1;AN=168;BQB=0.946403;DP=2866;DP4=1421,1205,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.03674e-08;MQSB=0.96857;RPB=0.801646;SGB=48.4712;VDB=0.0272362;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.5:17991836 chr05:017991836 0 W/17991836-17991836 FN985-S Single Base Substitution A-G INTERGENIC HOMO SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN-377.SNP.5:17993099 chr05:017993099 0 W/17993099-17993099 FN-377 Single Base Substitution C-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-42.SNP.5:18001606 chr05:018001606 0 W/18001606-18001606 FN-42 Single Base Substitution T-C INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2429.SNP.5:18009862 chr05:018009862 0 W/18009862-18009862 FN2429 SNP C -> T AC=2;AN=200;BQB=0.550046;DP=5399;DP4=2609,2323,28,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.50289e-35;MQSB=0.967808;RPB=0.747507;SGB=144.112;VDB=0.148716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.5:18020615 chr05:018020615 0 W/18020615-18020615 FN2385 SNP T -> C AC=1;AN=192;BQB=0.940425;DP=4936;DP4=2192,2489,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.73668e-13;MQSB=0.772567;RPB=0.994061;SGB=90.2896;VDB=0.353814;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.5:18021321 chr05:018021321 0 W/18021321-18021321 W385-6-8-4 Single Base Substitution C-T INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3574-S.SNP.5:18022342 chr05:018022342 0 W/18022342-18022342 FN3574-S SNP G -> A AC=1;AN=188;BQB=0.964675;DP=3321;DP4=1763,1457,17,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.93538e-17;MQSB=0.983863;RPB=0.679182;SGB=85.5904;VDB=0.265787;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.5:18025599 chr05:018025599 0 W/18025599-18025599 FN712-S Single Base Substitution C-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN757-S.SNP.5:18030579 chr05:018030579 0 W/18030579-18030579 FN757-S Single Base Substitution G-A INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. W385-6-8-4.SNP.5:18032564 chr05:018032564 0 W/18032564-18032564 W385-6-8-4 Single Base Substitution C-A INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2160-S.SNP.5:18042391 chr05:018042391 0 W/18042391-18042391 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.187343;DP=4184;DP4=2208,1928,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.104194;MQSB=0.675301;RPB=0.348679;SGB=-14.9417;VDB=0.92299;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.5:18045057 chr05:018045057 0 W/18045057-18045057 FN1037-S Single Base Substitution G-T INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN-330.SNP.5:18049676 chr05:018049676 0 W/18049676-18049676 FN-330 Single Base Substitution G-A INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN2531-S.SNP.5:18054708 chr05:018054708 0 W/18054708-18054708 FN2531-S SNP T -> A AC=1;AN=198;BQB=0.667152;DP=4451;DP4=2227,2008,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.64239e-12;MQSB=0.903704;RPB=0.669346;SGB=100.095;VDB=0.137173;EFF=INTRON(MODIFIER||||394|LOC_Os05g31062|protein_coding|CODING|LOC_Os05g31062.1|5|1) FN3526-S.SNP.5:18058039 chr05:018058039 0 W/18058039-18058039 FN3526-S SNP T -> C AC=2;AN=188;BQB=0.867211;DP=2779;DP4=1352,1343,14,9;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00575747;MQB=8.05773e-09;MQSB=0.856581;RPB=0.999658;SGB=98.9552;VDB=0.676632;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q1175|1301|LOC_Os05g31070|protein_coding|CODING|LOC_Os05g31070.1|5|1) FN3721-S.SNP.5:18061413 chr05:018061413 0 W/18061413-18061413 FN3721-S SNP C -> T AC=2;AN=190;BQB=0.988383;DP=2695;DP4=1179,1408,11,13;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00185529;MQB=1.00869e-06;MQSB=0.896963;RPB=0.566037;SGB=75.1932;VDB=0.43012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G216S|1301|LOC_Os05g31070|protein_coding|CODING|LOC_Os05g31070.1|1|1) FN1096-S.SNP.5:18063395 chr05:018063395 0 W/18063395-18063395 FN1096-S Single Base Substitution C-T INTRON HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3316-S.SNP.5:18069006 chr05:018069006 0 W/18069006-18069006 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.865618;DP=3228;DP4=1467,1649,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.93969e-12;MQSB=0.832109;RPB=0.976888;SGB=43.4494;VDB=0.606292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A166T|247|LOC_Os05g31090|protein_coding|CODING|LOC_Os05g31090.1|1|1) FN790-S.SNP.5:18084675 chr05:018084675 0 W/18084675-18084675 FN790-S Single Base Substitution A-T INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3531-S.SNP.5:18087572 chr05:018087572 0 W/18087572-18087572 FN3531-S SNP C -> G AC=1;AN=188;BQB=0.863691;DP=3797;DP4=2157,1533,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.50979e-10;MQSB=0.96259;RPB=0.822355;SGB=46.6141;VDB=0.428996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.5:18092802 chr05:018092802 0 W/18092802-18092802 FN2621-S SNP A -> T AC=2;AN=200;BQB=0.680312;DP=4976;DP4=2350,2319,36,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.55184e-30;MQSB=0.828662;RPB=0.85711;SGB=68.8812;VDB=0.700956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.5:18092809 chr05:018092809 0 W/18092809-18092809 FN2621-S SNP T -> G AC=2;AN=200;BQB=0.857074;DP=4882;DP4=2250,2325,30,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04891e-28;MQSB=0.823682;RPB=0.867973;SGB=112.85;VDB=0.366098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.5:18093556 chr05:018093556 0 W/18093556-18093556 FN2265-S SNP G -> T AC=1;AN=190;BQB=0.920324;DP=3982;DP4=2042,1561,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.62614e-10;MQSB=0.99768;RPB=0.849595;SGB=85.5263;VDB=0.300594;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.5:18094805 chr05:018094805 0 W/18094805-18094805 FN490-S Single Base Substitution G-A INTRON HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN490-S.SNP.5:18094806 chr05:018094806 0 W/18094806-18094806 FN490-S Single Base Substitution G-A INTRON HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN2534-S.SNP.5:18096870 chr05:018096870 0 W/18096870-18096870 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.869718;DP=3955;DP4=1957,1738,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15137e-05;MQSB=0.580205;RPB=0.254111;SGB=18.5788;VDB=0.229708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G1185R|1248|LOC_Os05g31130|protein_coding|CODING|LOC_Os05g31130.1|5|1) FN2617-S.SNP.5:18097866 chr05:018097866 0 W/18097866-18097866 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.659025;DP=3637;DP4=1792,1672,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00137476;MQB=4.72901e-09;MQSB=0.912926;RPB=0.234339;SGB=77.1196;VDB=0.178358;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C887*|1248|LOC_Os05g31130|protein_coding|CODING|LOC_Os05g31130.1|4|1);LOF=(LOC_Os05g31130|LOC_Os05g31130|1|1.00);NMD=(LOC_Os05g31130|LOC_Os05g31130|1|1.00) FN999-S.SNP.5:18098072 chr05:018098072 0 W/18098072-18098072 FN999-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g31130 retrotransposon protein, putative, unclassified, expressed SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN955-S.SNP.5:18108885 chr05:018108885 0 W/18108885-18108885 FN955-S Single Base Substitution A-G INTRON HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN2295.SNP.5:18110371 chr05:018110371 0 W/18110371-18110371 FN2295 SNP T -> C AC=1;AN=192;BQB=0.9991;DP=4866;DP4=2179,2325,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.86381e-12;MQSB=0.999618;RPB=0.658925;SGB=15.1765;VDB=0.975884;EFF=UTR_5_PRIME(MODIFIER||2770||300|LOC_Os05g31140|protein_coding|CODING|LOC_Os05g31140.3|1|1),INTRON(MODIFIER||||334|LOC_Os05g31140|protein_coding|CODING|LOC_Os05g31140.1|1|1) FN2749-S.SNP.5:18122488 chr05:018122488 0 W/18122488-18122488 FN2749-S SNP T -> C AC=1;AN=200;BQB=0.999659;DP=5212;DP4=2758,2258,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64558e-05;MQSB=0.975997;RPB=0.724855;SGB=31.2392;VDB=0.55693;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.5:18125496 chr05:018125496 0 W/18125496-18125496 FN955-S Single Base Substitution A-C INTERGENIC HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN3613-S.SNP.5:18139011 chr05:018139011 0 W/18139011-18139011 FN3613-S SNP A -> G AC=2;AN=190;BQB=0.997205;DP=2931;DP4=1409,1390,24,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.08622e-29;MQSB=0.996957;RPB=0.985414;SGB=178.98;VDB=0.977701;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.5:18141203 chr05:018141203 0 W/18141203-18141203 FN730-S Single Base Substitution A-T INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN2173-S.SNP.5:18142026 chr05:018142026 0 W/18142026-18142026 FN2173-S SNP A -> C AC=1;AN=166;BQB=0.0187319;DP=3891;DP4=1801,2028,15,12;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=7.91054e-09;MQSB=0.994523;RPB=0.997835;SGB=-42.92;VDB=0.833384;EFF=INTERGENIC(MODIFIER||||||||||1) FN726-S.SNP.5:18147901 chr05:018147901 0 W/18147901-18147901 FN726-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3827-S.SNP.5:18151952 chr05:018151952 0 W/18151952-18151952 FN3827-S SNP G -> A AC=2;AN=190;BQB=0.745012;DP=3203;DP4=1484,1587,26,19;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00780518;MQB=0.00198712;MQSB=0.901936;RPB=0.482576;SGB=149.825;VDB=0.75862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M351I|1219|LOC_Os05g31210|protein_coding|CODING|LOC_Os05g31210.1|2|1) FN1526-S.SNP.5:18158084 chr05:018158084 0 W/18158084-18158084 FN1526-S Single Base Substitution G-A INTERGENIC Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN3890-S.SNP.5:18166086 chr05:018166086 0 W/18166086-18166086 FN3890-S SNP G -> A AC=2;AN=158;BQB=0.992399;DP=2407;DP4=1044,1243,23,28;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.86237e-25;MQSB=0.438525;RPB=0.994495;SGB=212.124;VDB=0.859188;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D71|148|LOC_Os05g31230|protein_coding|CODING|LOC_Os05g31230.3|1|1),INTRON(MODIFIER||||326|LOC_Os05g31230|protein_coding|CODING|LOC_Os05g31230.2|1|1) FN3763-S.SNP.5:18167794 chr05:018167794 0 W/18167794-18167794 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.963136;DP=2821;DP4=1344,1406,1,12;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.17866;MQB=0.970271;MQSB=3.72715e-31;RPB=0.699101;SGB=53.6492;VDB=0.691791;EFF=UTR_5_PRIME(MODIFIER||1496||148|LOC_Os05g31230|protein_coding|CODING|LOC_Os05g31230.3|1|1),INTRON(MODIFIER||||326|LOC_Os05g31230|protein_coding|CODING|LOC_Os05g31230.2|1|1) FN1464-S.SNP.5:18171076 chr05:018171076 0 W/18171076-18171076 FN1464-S Single Base Substitution T-C INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN850-S.SNP.5:18171795 chr05:018171795 0 W/18171795-18171795 FN850-S Single Base Substitution A-G INTRON HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN3413-S.SNP.5:18178741 chr05:018178741 0 W/18178741-18178741 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.97808;DP=2536;DP4=1217,1246,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.0199863;MQSB=3.73043e-06;RPB=0.999531;SGB=35.1773;VDB=0.819559;EFF=INTRON(MODIFIER||||612|LOC_Os05g31254|protein_coding|CODING|LOC_Os05g31254.1|9|1) FN2723-S.SNP.5:18184354 chr05:018184354 0 W/18184354-18184354 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.809516;DP=4294;DP4=1821,2262,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18162e-08;MQSB=0.987098;RPB=0.875907;SGB=4.67442;VDB=0.428916;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y100|152|LOC_Os05g31280|protein_coding|CODING|LOC_Os05g31280.1|4|1) FN3456-S.SNP.5:18200154 chr05:018200154 0 W/18200154-18200154 FN3456-S SNP C -> A AC=1;AN=184;BQB=0.957377;DP=2603;DP4=1337,1159,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43467e-05;MQSB=0.976727;RPB=0.898957;SGB=10.6662;VDB=0.781995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.5:18204802 chr05:018204802 0 W/18204802-18204802 FN3400-S SNP T -> A AC=1;AN=184;BQB=0.997291;DP=3243;DP4=1350,1771,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.52275e-06;MQSB=0.999432;RPB=0.911415;SGB=28.7043;VDB=0.393696;EFF=INTRON(MODIFIER||||239|LOC_Os05g31320|protein_coding|CODING|LOC_Os05g31320.1|5|1) FN4128-S.SNP.5:18209315 chr05:018209315 0 W/18209315-18209315 FN4128-S SNP T -> C AC=2;AN=182;BQB=0.964685;DP=3010;DP4=1323,1564,5,14;HOB=0.0217365;ICB=0.494567;MQ=19;MQ0F=0.218937;MQB=0.0785289;MQSB=2.12177e-30;RPB=0.960718;SGB=80.1982;VDB=0.787875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.5:18215786 chr05:018215786 0 W/18215786-18215786 FN2284 SNP A -> T AC=1;AN=192;BQB=0.960867;DP=4799;DP4=2362,2285,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.128777;MQB=0.472761;MQSB=0.24922;RPB=0.80655;SGB=86.1165;VDB=0.219565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I148L|1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN2658-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN2658-S SNP T -> C AC=2;AN=200;BQB=0.769222;DP=3805;DP4=1737,1842,29,22;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0599212;MQB=2.33975e-16;MQSB=0;RPB=0.0934935;SGB=-771.542;VDB=0.996408;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN3376-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN3376-S SNP T -> C AC=1;AN=184;BQB=0.406886;DP=2150;DP4=979,1020,14,40;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0469767;MQB=5.84699e-24;MQSB=4.97666e-33;RPB=2.40859e-07;SGB=-665.796;VDB=0.581949;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN347-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN347-S Single Base Substitution T-C INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3599-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN3599-S SNP T -> C AC=2;AN=188;BQB=0.900706;DP=2481;DP4=1100,1267,9,33;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0415155;MQB=9.25696e-20;MQSB=1.44916e-34;RPB=4.46741e-08;SGB=-295.094;VDB=0.00755828;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN3738-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN3738-S SNP T -> C AC=2;AN=190;BQB=0.724075;DP=2807;DP4=1282,1353,10,45;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0434628;MQB=3.26047e-28;MQSB=1.44241e-37;RPB=2.93874e-13;SGB=-706.525;VDB=4.7974e-08;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN3766-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN3766-S SNP T -> C AC=2;AN=190;BQB=0.297406;DP=2199;DP4=951,1123,16,36;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0491132;MQB=9.48796e-23;MQSB=2.13874e-35;RPB=1.94707e-09;SGB=-614.907;VDB=0.00445947;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN3897-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN3897-S SNP T -> C AC=2;AN=158;BQB=0.9772;DP=1871;DP4=801,946,19,31;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.0550508;MQB=4.0526e-18;MQSB=6.44358e-35;RPB=0.000933132;SGB=-370.133;VDB=0.649768;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN4024-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN4024-S SNP T -> C AC=2;AN=168;BQB=0.227825;DP=2445;DP4=1093,1201,11,38;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.0466258;MQB=6.84497e-24;MQSB=1.64587e-40;RPB=9.51388e-06;SGB=-503.734;VDB=0.623418;EFF=INTRON(MODIFIER||||1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|2|1) FN474-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN474-S Single Base Substitution T-C INTRON HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN696-S Single Base Substitution T-C INTRON HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN975-S.SNP.5:18217872 chr05:018217872 0 W/18217872-18217872 FN975-S Single Base Substitution T-C INTRON HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2284.SNP.5:18218785 chr05:018218785 0 W/18218785-18218785 FN2284 SNP T -> A AC=1;AN=192;BQB=0.944714;DP=5115;DP4=2342,2409,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0254154;MQB=0.158886;MQSB=0;RPB=0.893688;SGB=103.983;VDB=0.321457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N774K|1326|LOC_Os05g31340|protein_coding|CODING|LOC_Os05g31340.1|3|1) FN2673-S.SNP.5:18221682 chr05:018221682 0 W/18221682-18221682 FN2673-S SNP T -> C AC=2;AN=200;BQB=0.640963;DP=4177;DP4=1953,2049,17,24;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.149629;MQB=0.95471;MQSB=0.964883;RPB=0.688478;SGB=183.209;VDB=0.127985;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.5:18221760 chr05:018221760 0 W/18221760-18221760 FN4041-S SNP T -> A AC=1;AN=168;BQB=0.97902;DP=2163;DP4=1026,1063,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.00416089;MQB=0.847733;MQSB=3.78265e-05;RPB=0.613567;SGB=30.0193;VDB=0.052315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.5:18225465 chr05:018225465 0 W/18225465-18225465 FN3360-S SNP C -> T AC=2;AN=184;BQB=0.973047;DP=2694;DP4=1426,1157,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.10063e-14;MQSB=0.711764;RPB=0.716178;SGB=88.5747;VDB=0.659058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.5:18225851 chr05:018225851 0 W/18225851-18225851 FN2725-S SNP C -> T AC=2;AN=200;BQB=0.353291;DP=4414;DP4=2158,2036,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000453104;MQB=3.97143e-21;MQSB=0.380276;RPB=0.723844;SGB=164.789;VDB=0.64542;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.5:18226647 chr05:018226647 0 W/18226647-18226647 FN-408 Single Base Substitution C-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN_846-8-1.SNP.5:18237318 chr05:018237318 0 W/18237318-18237318 FN_846-8-1 Single Base Substitution C-T Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN_846-8-1.SNP.5:18237319 chr05:018237319 0 W/18237319-18237319 FN_846-8-1 Single Base Substitution A-T Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN441-S.SNP.5:18243057 chr05:018243057 0 W/18243057-18243057 FN441-S Single Base Substitution T-A INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN441-S.SNP.5:18243058 chr05:018243058 0 W/18243058-18243058 FN441-S Single Base Substitution C-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN441-S.SNP.5:18243074 chr05:018243074 0 W/18243074-18243074 FN441-S Single Base Substitution G-C INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1677-S.SNP.5:18260672 chr05:018260672 0 W/18260672-18260672 FN1677-S SNP C -> T AC=1;AN=188;BQB=0.0767559;DP=2849;DP4=1648,1177,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0013625;MQSB=0.788082;RPB=0.731676;SGB=-34.1676;VDB=0.149077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T211I|440|LOC_Os05g31400|protein_coding|CODING|LOC_Os05g31400.1|4|1) FN1318-S.SNP.5:18270542 chr05:018270542 0 W/18270542-18270542 FN1318-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN3293-S.SNP.5:18274545 chr05:018274545 0 W/18274545-18274545 FN3293-S SNP T -> A AC=2;AN=184;BQB=0.864781;DP=2831;DP4=1339,1408,21,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.96119e-16;MQSB=0.921091;RPB=0.980675;SGB=139.178;VDB=0.169187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.5:18278771 chr05:018278771 0 W/18278771-18278771 FN2283 SNP A -> T AC=1;AN=192;BQB=0.681775;DP=5521;DP4=3062,2087,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.151784;MQB=0.665216;MQSB=0;RPB=0.322086;SGB=93.2452;VDB=0.0959641;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.5:18279445 chr05:018279445 0 W/18279445-18279445 FN2085-S SNP C -> G AC=2;AN=168;BQB=0.998058;DP=3614;DP4=2132,1398,32,18;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.113171;MQB=0.0565234;MQSB=0.753134;RPB=0.0775637;SGB=-164.861;VDB=0.104012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.5:18279856 chr05:018279856 0 W/18279856-18279856 FN1403-S Single Base Substitution G-T INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN3345-S.SNP.5:18297418 chr05:018297418 0 W/18297418-18297418 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.987477;DP=2626;DP4=1321,1205,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.62646e-10;MQSB=0.841107;RPB=0.897926;SGB=75.8731;VDB=0.538493;EFF=INTERGENIC(MODIFIER||||||||||1) FN1590-S.SNP.5:18308211 chr05:018308211 0 W/18308211-18308211 FN1590-S Single Base Substitution A-G INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3353-S.SNP.5:18309064 chr05:018309064 0 W/18309064-18309064 FN3353-S SNP C -> G AC=1;AN=184;BQB=0.517825;DP=2718;DP4=1313,1284,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.31521e-09;MQSB=0.999936;RPB=0.96212;SGB=60.4004;VDB=0.868655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.5:18313228 chr05:018313228 0 W/18313228-18313228 FN3570-S SNP T -> A AC=2;AN=190;BQB=0.8958;DP=3116;DP4=1492,1472,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.98493e-12;MQSB=0.826745;RPB=0.445749;SGB=126.511;VDB=0.177765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.5:18325539 chr05:018325539 0 W/18325539-18325539 FN3357-S SNP C -> A AC=2;AN=184;BQB=0.659252;DP=3248;DP4=1821,1280,28,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.971e-17;MQSB=0.94018;RPB=0.327071;SGB=78.7544;VDB=0.151149;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.5:18334481 chr05:018334481 0 W/18334481-18334481 FN1732-S SNP G -> T AC=1;AN=188;BQB=0.0459394;DP=3987;DP4=2021,1927,14,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.83748e-09;MQSB=0.895037;RPB=0.859777;SGB=-108.551;VDB=0.0834269;EFF=INTRON(MODIFIER||||219|LOC_Os05g31520|protein_coding|CODING|LOC_Os05g31520.1|5|1) FN-259.SNP.5:18341222 chr05:018341222 0 W/18341222-18341222 FN-259 Single Base Substitution C-G INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN3396-S.SNP.5:18350050 chr05:018350050 0 W/18350050-18350050 FN3396-S SNP C -> T AC=2;AN=184;BQB=0.494953;DP=2999;DP4=1369,1476,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.01633e-14;MQSB=0.699904;RPB=0.982597;SGB=61.1019;VDB=0.548774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.5:18358807 chr05:018358807 0 W/18358807-18358807 FN3312-S SNP T -> C AC=1;AN=184;BQB=0.844772;DP=2724;DP4=1286,1336,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.39715e-10;MQSB=0.999909;RPB=0.215087;SGB=60.4004;VDB=0.0276481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.5:18363128 chr05:018363128 0 W/18363128-18363128 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.584286;DP=5332;DP4=2596,2514,11,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00356339;MQB=5.06306e-10;MQSB=0.968369;RPB=0.216196;SGB=65.5058;VDB=0.0980996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.5:18363274 chr05:018363274 0 W/18363274-18363274 FN2082-S SNP A -> T AC=2;AN=168;BQB=0.631083;DP=3358;DP4=1483,1810,27,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.51278e-24;MQSB=0.0778549;RPB=0.999587;SGB=-113.574;VDB=0.678781;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.5:18368174 chr05:018368174 0 W/18368174-18368174 FN229-S Single Base Substitution C-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN920-S.SNP.5:18380786 chr05:018380786 0 W/18380786-18380786 FN920-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN920-S.SNP.5:18380787 chr05:018380787 0 W/18380787-18380787 FN920-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os05g31570 disease resistance protein RGA4, putative, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3857-S.SNP.5:18386125 chr05:018386125 0 W/18386125-18386125 FN3857-S SNP T -> G AC=1;AN=158;BQB=0.972;DP=2494;DP4=1318,1044,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.88614e-08;MQSB=0.981405;RPB=0.60498;SGB=60.1755;VDB=0.0779874;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtC|V86|195|LOC_Os05g31580|protein_coding|CODING|LOC_Os05g31580.1|1|1) FN260-S.SNP.5:18395124 chr05:018395124 0 W/18395124-18395124 FN260-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3678-S.SNP.5:18405585 chr05:018405585 0 W/18405585-18405585 FN3678-S SNP G -> A AC=1;AN=190;BQB=0.992206;DP=3236;DP4=1517,1575,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78778e-07;MQSB=0.890375;RPB=0.854028;SGB=53.6492;VDB=0.0834917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.5:18410515 chr05:018410515 0 W/18410515-18410515 FN1076-S Single Base Substitution T-C INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3859-S.SNP.5:18412484 chr05:018412484 0 W/18412484-18412484 FN3859-S SNP T -> C AC=2;AN=158;BQB=0.577131;DP=2782;DP4=1153,1445,12,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.67941e-11;MQSB=0.961342;RPB=0.721672;SGB=81.2457;VDB=0.969382;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.5:18412500 chr05:018412500 0 W/18412500-18412500 FN3532-S SNP C -> T AC=1;AN=188;BQB=0.817795;DP=3196;DP4=1458,1657,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20828e-11;MQSB=0.999922;RPB=0.82419;SGB=94.4119;VDB=0.187098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.5:18414876 chr05:018414876 0 W/18414876-18414876 FN1353-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2422.SNP.5:18418784 chr05:018418784 0 W/18418784-18418784 FN2422 SNP T -> C AC=1;AN=200;BQB=0.999874;DP=3908;DP4=1479,2036,4,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00102354;MQB=4.62517e-05;MQSB=1.91488e-16;RPB=0.938556;SGB=11.2488;VDB=0.684511;EFF=INTRON(MODIFIER||||1002|LOC_Os05g31630|protein_coding|CODING|LOC_Os05g31630.1|1|1) FN3857-S.SNP.5:18422850 chr05:018422850 0 W/18422850-18422850 FN3857-S SNP G -> C AC=1;AN=158;BQB=0.989498;DP=2215;DP4=1048,1098,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.86245e-09;MQSB=0.915789;RPB=0.96565;SGB=55.806;VDB=0.507997;EFF=INTRON(MODIFIER||||1002|LOC_Os05g31630|protein_coding|CODING|LOC_Os05g31630.1|7|1) FN2681-S.SNP.5:18424727 chr05:018424727 0 W/18424727-18424727 FN2681-S SNP C -> T AC=2;AN=200;BQB=0.955823;DP=4714;DP4=2163,2243,21,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.22666e-27;MQSB=0.755137;RPB=0.694721;SGB=238.471;VDB=0.834486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.5:18440538 chr05:018440538 0 W/18440538-18440538 FN3750-S SNP A -> T AC=2;AN=190;BQB=0.90895;DP=2658;DP4=1167,1109,17,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.40432e-17;MQSB=0.939394;RPB=0.868539;SGB=49.6374;VDB=0.311671;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.5:18451745 chr05:018451745 0 W/18451745-18451745 FN952-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN994-S.SNP.5:18455154 chr05:018455154 0 W/18455154-18455154 FN994-S Single Base Substitution T-A INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN1184-S.SNP.5:18467409 chr05:018467409 0 W/18467409-18467409 FN1184-S Single Base Substitution C-G INTRON HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1458-S.SNP.5:18470936 chr05:018470936 0 W/18470936-18470936 FN1458-S Single Base Substitution C-T INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2320.SNP.5:18472110 chr05:018472110 0 W/18472110-18472110 FN2320 SNP A -> G AC=2;AN=192;BQB=0.744566;DP=4494;DP4=2124,2026,12,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.92113e-13;MQSB=0.848706;RPB=0.963339;SGB=113.111;VDB=0.101921;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.5:18474415 chr05:018474415 0 W/18474415-18474415 FN879-S Single Base Substitution C-A INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN1652-S.SNP.5:18474461 chr05:018474461 0 W/18474461-18474461 FN1652-S Single Base Substitution G-C INTERGENIC Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2192-S.SNP.5:18477212 chr05:018477212 0 W/18477212-18477212 FN2192-S SNP G -> T AC=1;AN=190;BQB=0.270926;DP=4594;DP4=2083,2269,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48667e-14;MQSB=0.968124;RPB=0.151112;SGB=-38.5551;VDB=0.284924;EFF=INTRON(MODIFIER||||453|LOC_Os05g31730|protein_coding|CODING|LOC_Os05g31730.1|1|1) FN-181.SNP.5:18483109 chr05:018483109 0 W/18483109-18483109 FN-181 Single Base Substitution G-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN4046-S.SNP.5:18483902 chr05:018483902 0 W/18483902-18483902 FN4046-S SNP C -> T AC=1;AN=168;BQB=0.731791;DP=2794;DP4=1342,1318,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.78839e-09;MQSB=0.990881;RPB=0.964946;SGB=58.7637;VDB=0.00607626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.5:18484684 chr05:018484684 0 W/18484684-18484684 FN1153-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3594-S.SNP.5:18484737 chr05:018484737 0 W/18484737-18484737 FN3594-S SNP T -> C AC=1;AN=188;BQB=0.943521;DP=2561;DP4=1047,1391,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.91481e-08;MQSB=0.829128;RPB=0.994374;SGB=62.6088;VDB=0.801087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.5:18485807 chr05:018485807 0 W/18485807-18485807 FN3475-S SNP C -> T AC=1;AN=184;BQB=0.997528;DP=3294;DP4=1913,1273,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02711e-07;MQSB=0.939225;RPB=0.704865;SGB=44.2207;VDB=0.354229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.5:18486147 chr05:018486147 0 W/18486147-18486147 FN2217-S SNP C -> T AC=1;AN=190;BQB=0.864079;DP=3669;DP4=1548,1788,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.1703e-07;MQSB=0.999211;RPB=0.404138;SGB=-14.8836;VDB=0.41217;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.5:18491080 chr05:018491080 0 W/18491080-18491080 FN804-S Single Base Substitution G-A INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1307-S.SNP.5:18495449 chr05:018495449 0 W/18495449-18495449 FN1307-S Single Base Substitution C-A SPLICE_SITE_ACCEPTOR HET LOC_Os05g31750 annexin, putative, expressed SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1307-S.SNP.5:18495450 chr05:018495450 0 W/18495450-18495450 FN1307-S Single Base Substitution T-C SPLICE_SITE_ACCEPTOR HET LOC_Os05g31750 annexin, putative, expressed SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN514-S.SNP.5:18507539 chr05:018507539 0 W/18507539-18507539 FN514-S Single Base Substitution T-C INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3676-S.SNP.5:18509955 chr05:018509955 0 W/18509955-18509955 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.709512;DP=2775;DP4=1293,1375,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.06104e-05;MQSB=0.975101;RPB=0.865056;SGB=44.5415;VDB=0.119856;EFF=SPLICE_SITE_REGION(LOW||||417|LOC_Os05g31780|protein_coding|CODING|LOC_Os05g31780.1|5|1),SPLICE_SITE_REGION(LOW||||414|LOC_Os05g31780|protein_coding|CODING|LOC_Os05g31780.2|5|1),INTRON(MODIFIER||||417|LOC_Os05g31780|protein_coding|CODING|LOC_Os05g31780.1|5|1),INTRON(MODIFIER||||414|LOC_Os05g31780|protein_coding|CODING|LOC_Os05g31780.2|5|1) FN3834-S.SNP.5:18512760 chr05:018512760 0 W/18512760-18512760 FN3834-S SNP A -> G AC=1;AN=190;BQB=0.997762;DP=2419;DP4=958,1271,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.64989e-05;MQSB=0.74889;RPB=0.793188;SGB=21.8853;VDB=0.854392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.5:18516988 chr05:018516988 0 W/18516988-18516988 FN1371-S Single Base Substitution C-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3524-S.SNP.5:18525806 chr05:018525806 0 W/18525806-18525806 FN3524-S SNP C -> T AC=2;AN=188;BQB=0.990068;DP=3660;DP4=1951,1614,22,12;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0259563;MQB=0.0098958;MQSB=0.784955;RPB=0.915875;SGB=148.931;VDB=0.220706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.5:18534623 chr05:018534623 0 W/18534623-18534623 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.770137;DP=2061;DP4=924,1012,9,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.59675e-14;MQSB=0.0913683;RPB=0.0588985;SGB=112.609;VDB=0.643198;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G167|184|LOC_Os05g31820|protein_coding|CODING|LOC_Os05g31820.1|1|1) FN3821-S.SNP.5:18543151 chr05:018543151 0 W/18543151-18543151 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.885391;DP=3139;DP4=1696,1322,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22262e-08;MQSB=0.996824;RPB=0.972467;SGB=18.552;VDB=0.127562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G213R|610|LOC_Os05g31850|protein_coding|CODING|LOC_Os05g31850.1|4|1) FN2689-S.SNP.5:18543558 chr05:018543558 0 W/18543558-18543558 FN2689-S SNP C -> G AC=1;AN=200;BQB=0.820909;DP=5086;DP4=2856,1996,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5729e-13;MQSB=0.991441;RPB=0.75062;SGB=72.7161;VDB=0.848941;EFF=INTRON(MODIFIER||||610|LOC_Os05g31850|protein_coding|CODING|LOC_Os05g31850.1|4|1) FN775-S.SNP.5:18549255 chr05:018549255 0 W/18549255-18549255 FN775-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN4201-S.SNP.5:18550514 chr05:018550514 0 W/18550514-18550514 FN4201-S SNP T -> G AC=1;AN=170;BQB=0.879625;DP=2697;DP4=1337,1251,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.18536e-10;MQSB=0.951841;RPB=0.731028;SGB=61.2001;VDB=0.968431;EFF=INTRON(MODIFIER||||1056|LOC_Os05g31860|protein_coding|CODING|LOC_Os05g31860.1|1|1) FN907-S.SNP.5:18556811 chr05:018556811 0 W/18556811-18556811 FN907-S Single Base Substitution T-A INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN907-S.SNP.5:18556813 chr05:018556813 0 W/18556813-18556813 FN907-S Single Base Substitution C-A INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3650-S.SNP.5:18557626 chr05:018557626 0 W/18557626-18557626 FN3650-S SNP C -> T AC=2;AN=190;BQB=0.973732;DP=2832;DP4=1372,1309,23,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.827e-23;MQSB=0.975759;RPB=0.951392;SGB=132.055;VDB=0.466091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.5:18558427 chr05:018558427 0 W/18558427-18558427 FN2161-S SNP G -> A AC=1;AN=168;BQB=0.028847;DP=2936;DP4=1366,1510,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.91457e-07;MQSB=0.981951;RPB=0.97428;SGB=8.48315;VDB=0.984469;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.5:18563329 chr05:018563329 0 W/18563329-18563329 FN929-S Single Base Substitution G-A INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN927-S.SNP.5:18572048 chr05:018572048 0 W/18572048-18572048 FN927-S Single Base Substitution C-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN927-S.SNP.5:18572053 chr05:018572053 0 W/18572053-18572053 FN927-S Single Base Substitution A-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN891-S.SNP.5:18575184 chr05:018575184 0 W/18575184-18575184 FN891-S Single Base Substitution A-T INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3437-S.SNP.5:18582093 chr05:018582093 0 W/18582093-18582093 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.954774;DP=3024;DP4=1394,1517,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29076e-06;MQSB=0.98944;RPB=0.121963;SGB=25.1826;VDB=0.484466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.5:18582137 chr05:018582137 0 W/18582137-18582137 FN2554-S SNP A -> G AC=1;AN=198;BQB=0.431071;DP=4266;DP4=1902,2142,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000703235;MQB=3.87359e-14;MQSB=0.944651;RPB=0.284632;SGB=113.881;VDB=0.96494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:18583619 chr05:018583619 0 W/18583619-18583619 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.970845;DP=4299;DP4=2107,1824,21,20;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00209351;MQB=1.88558e-17;MQSB=0.333078;RPB=0.425576;SGB=0.447097;VDB=0.83353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:18583619 chr05:018583619 0 W/18583619-18583619 FN2572-S Single Base Substitution G-A INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2177-S.SNP.5:18584896 chr05:018584896 0 W/18584896-18584896 FN2177-S SNP C -> T AC=1;AN=168;BQB=0.406192;DP=3359;DP4=988,2319,6,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.09022e-13;MQSB=0.926276;RPB=0.891259;SGB=-11.0644;VDB=0.40402;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.5:18586593 chr05:018586593 0 W/18586593-18586593 FN483-S Single Base Substitution G-A INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3857-S.SNP.5:18594677 chr05:018594677 0 W/18594677-18594677 FN3857-S SNP C -> A AC=1;AN=158;BQB=0.933626;DP=2205;DP4=957,1145,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.71826e-07;MQSB=0.209033;RPB=0.0773719;SGB=27.3346;VDB=0.200746;EFF=INTRON(MODIFIER||||1086|LOC_Os05g31920|protein_coding|CODING|LOC_Os05g31920.1|1|1),INTRON(MODIFIER||||1086|LOC_Os05g31920|protein_coding|CODING|LOC_Os05g31920.2|1|1) FN447-S.SNP.5:18601680 chr05:018601680 0 W/18601680-18601680 FN447-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g31930 retrotransposon protein, putative, unclassified, expressed SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN1022-S.SNP.5:18602499 chr05:018602499 0 W/18602499-18602499 FN1022-S Single Base Substitution C-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1443-S.SNP.5:18616703 chr05:018616703 0 W/18616703-18616703 FN1443-S Single Base Substitution C-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1367-S.SNP.5:18620055 chr05:018620055 0 W/18620055-18620055 FN1367-S Single Base Substitution T-C INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1239-S.SNP.5:18633306 chr05:018633306 0 W/18633306-18633306 FN1239-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4123-S.SNP.5:18633408 chr05:018633408 0 W/18633408-18633408 FN4123-S SNP G -> A AC=1;AN=182;BQB=0.972086;DP=1921;DP4=854,1002,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.62512e-05;MQSB=0.768788;RPB=0.927787;SGB=35.0899;VDB=0.511505;EFF=INTERGENIC(MODIFIER||||||||||1) FN4121-S.SNP.5:18633453 chr05:018633453 0 W/18633453-18633453 FN4121-S SNP G -> A AC=1;AN=182;BQB=0.955181;DP=1881;DP4=866,961,2,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.87902e-05;MQSB=0.994475;RPB=0.534196;SGB=26.0691;VDB=0.329396;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.5:18637828 chr05:018637828 0 W/18637828-18637828 FN947-S Single Base Substitution G-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1478-S.SNP.5:18638646 chr05:018638646 0 W/18638646-18638646 FN1478-S Single Base Substitution G-C INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2612-S.SNP.5:18642571 chr05:018642571 0 W/18642571-18642571 FN2612-S SNP C -> A AC=1;AN=198;BQB=0.0812479;DP=3853;DP4=1911,1720,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4715e-06;MQSB=0.87647;RPB=0.507158;SGB=50.9344;VDB=0.493997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.5:18643095 chr05:018643095 0 W/18643095-18643095 FN3545-S SNP G -> T AC=1;AN=188;BQB=0.924149;DP=2457;DP4=1186,1210,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000218875;MQSB=0.971056;RPB=0.763751;SGB=30.8063;VDB=0.674881;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.5:18643766 chr05:018643766 0 W/18643766-18643766 FN910-S Single Base Substitution C-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3353-S.SNP.5:18644081 chr05:018644081 0 W/18644081-18644081 FN3353-S SNP G -> A AC=1;AN=184;BQB=0.593883;DP=2768;DP4=1331,1324,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.34938e-08;MQSB=0.999813;RPB=0.923822;SGB=32.2261;VDB=0.70783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.5:18644085 chr05:018644085 0 W/18644085-18644085 FN3353-S SNP G -> C AC=1;AN=184;BQB=0.95172;DP=2744;DP4=1326,1334,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.51734e-08;MQSB=0.980917;RPB=0.976555;SGB=44.2207;VDB=0.563266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.5:18645502 chr05:018645502 0 W/18645502-18645502 FN3508-S SNP C -> G AC=1;AN=188;BQB=0.511057;DP=2875;DP4=1575,1167,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26474e-05;MQSB=0.208241;RPB=0.366556;SGB=28.8977;VDB=0.921324;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.5:18648370 chr05:018648370 0 W/18648370-18648370 FN1455-S Single Base Substitution T-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2696-S.SNP.5:18649326 chr05:018649326 0 W/18649326-18649326 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.535094;DP=4845;DP4=2384,2124,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000619195;MQB=3.78943e-12;MQSB=0.93484;RPB=0.223164;SGB=-10.0844;VDB=0.0228703;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.5:18653857 chr05:018653857 0 W/18653857-18653857 FN486-S Single Base Substitution A-G INTRON HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN666-S.SNP.5:18656884 chr05:018656884 0 W/18656884-18656884 FN666-S Single Base Substitution C-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3502-S.SNP.5:18667547 chr05:018667547 0 W/18667547-18667547 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.999686;DP=2477;DP4=1181,1234,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67441e-11;MQSB=0.998804;RPB=0.253327;SGB=60.7873;VDB=0.320361;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L634|670|LOC_Os05g32030|protein_coding|CODING|LOC_Os05g32030.1|12|1) FN2125-S.SNP.5:18674949 chr05:018674949 0 W/18674949-18674949 FN2125-S SNP T -> C AC=1;AN=168;BQB=0.509647;DP=2782;DP4=1346,1390,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000359454;MQB=0.000127022;MQSB=0.93716;RPB=0.685903;SGB=2.75988;VDB=0.406539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N786S|1425|LOC_Os05g32050|protein_coding|CODING|LOC_Os05g32050.1|4|1) FN2242-S.SNP.5:18675496 chr05:018675496 0 W/18675496-18675496 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.99981;DP=4532;DP4=1833,2359,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.95903e-11;MQSB=0.994406;RPB=0.848453;SGB=68.0854;VDB=0.102771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V666I|1425|LOC_Os05g32050|protein_coding|CODING|LOC_Os05g32050.1|3|1) FN2395.SNP.5:18676568 chr05:018676568 0 W/18676568-18676568 FN2395 SNP G -> C AC=1;AN=200;BQB=0.988267;DP=4289;DP4=2129,1958,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.14329e-17;MQSB=0.851501;RPB=0.725694;SGB=105.163;VDB=0.761826;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taG|Y509*|1425|LOC_Os05g32050|protein_coding|CODING|LOC_Os05g32050.1|2|1);LOF=(LOC_Os05g32050|LOC_Os05g32050|1|1.00);NMD=(LOC_Os05g32050|LOC_Os05g32050|1|1.00) FN3325-S.SNP.5:18678345 chr05:018678345 0 W/18678345-18678345 FN3325-S SNP A -> T AC=2;AN=184;BQB=0.857799;DP=2795;DP4=1405,1298,11,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.51164e-11;MQSB=0.931003;RPB=0.521901;SGB=103.004;VDB=0.36387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.5:18680480 chr05:018680480 0 W/18680480-18680480 FN1154-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2408.SNP.5:18689436 chr05:018689436 0 W/18689436-18689436 FN2408 SNP C -> T AC=1;AN=200;BQB=0.700002;DP=5060;DP4=2013,2656,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.04814e-08;MQSB=0.000991238;RPB=0.728475;SGB=9.48993;VDB=0.505712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.5:18699038 chr05:018699038 0 W/18699038-18699038 FN2106-S SNP A -> G AC=1;AN=168;BQB=0.98106;DP=4138;DP4=2008,2092,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.38604e-10;MQSB=0.995492;RPB=0.652759;SGB=-39.5049;VDB=0.00446532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.5:18700228 chr05:018700228 0 W/18700228-18700228 FN3390-S SNP C -> A AC=1;AN=184;BQB=0.510752;DP=3609;DP4=2179,1329,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.058742;MQB=0.931858;MQSB=4.12384e-05;RPB=0.99448;SGB=28.7043;VDB=0.983316;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G16*|108|LOC_Os05g32080|protein_coding|CODING|LOC_Os05g32080.1|1|1) FN3282-S.SNP.5:18710572 chr05:018710572 0 W/18710572-18710572 FN3282-S SNP G -> A AC=1;AN=184;BQB=0.876737;DP=2904;DP4=1211,1631,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.58745e-08;MQSB=0.814662;RPB=0.999952;SGB=53.2642;VDB=0.557653;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.5:18718382 chr05:018718382 0 W/18718382-18718382 FN508-S Single Base Substitution G-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN-310.SNP.5:18718652 chr05:018718652 0 W/18718652-18718652 FN-310 Single Base Substitution G-T INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN743-S.SNP.5:18718996 chr05:018718996 0 W/18718996-18718996 FN743-S Single Base Substitution T-G INTERGENIC HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN934-S.SNP.5:18724150 chr05:018724150 0 W/18724150-18724150 FN934-S Single Base Substitution C-G INTRON HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. W481-5-1.SNP.5:18725223 chr05:018725223 0 W/18725223-18725223 W481-5-1 Single Base Substitution G-C INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W426-1-1.SNP.5:18727404 chr05:018727404 0 W/18727404-18727404 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN2284.SNP.5:18728997 chr05:018728997 0 W/18728997-18728997 FN2284 SNP C -> A AC=1;AN=192;BQB=0.661044;DP=4303;DP4=1982,2004,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000232396;MQB=3.99884e-10;MQSB=0.000508542;RPB=0.833163;SGB=57.6018;VDB=0.221079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L44I|352|LOC_Os05g32120|protein_coding|CODING|LOC_Os05g32120.1|1|1) FN4279-S.SNP.5:18733063 chr05:018733063 0 W/18733063-18733063 FN4279-S SNP A -> T AC=1;AN=170;BQB=0.964068;DP=2524;DP4=1215,1231,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.39691e-11;MQSB=0.923921;RPB=0.339334;SGB=48.6486;VDB=0.356377;EFF=INTRON(MODIFIER||||173|LOC_Os05g32130|protein_coding|CODING|LOC_Os05g32130.1|2|1) FN4279-S.SNP.5:18733064 chr05:018733064 0 W/18733064-18733064 FN4279-S SNP A -> T AC=1;AN=170;BQB=0.814332;DP=2529;DP4=1192,1227,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.62871e-11;MQSB=0.962532;RPB=0.217724;SGB=65.6427;VDB=0.342582;EFF=INTRON(MODIFIER||||173|LOC_Os05g32130|protein_coding|CODING|LOC_Os05g32130.1|2|1) FN3950-S.SNP.5:18742228 chr05:018742228 0 W/18742228-18742228 FN3950-S SNP G -> A AC=1;AN=168;BQB=0.922475;DP=2431;DP4=1209,1115,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.9128e-08;MQSB=0.993709;RPB=0.997396;SGB=45.0404;VDB=0.253463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.5:18746217 chr05:018746217 0 W/18746217-18746217 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.910283;DP=4695;DP4=1922,2406,16,25;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000638978;MQB=0.0126126;MQSB=0.966983;RPB=0.533292;SGB=90.0605;VDB=0.977588;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.5:18749382 chr05:018749382 0 W/18749382-18749382 FN4104-S SNP G -> A AC=2;AN=182;BQB=0.893704;DP=2963;DP4=1715,1172,8,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.31125e-12;MQSB=0.965682;RPB=0.967206;SGB=38.2092;VDB=0.219549;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.5:18752289 chr05:018752289 0 W/18752289-18752289 FN1163-S Single Base Substitution C-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN836-S.SNP.5:18767926 chr05:018767926 0 W/18767926-18767926 FN836-S Single Base Substitution G-A INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3824-S.SNP.5:18772201 chr05:018772201 0 W/18772201-18772201 FN3824-S SNP C -> A AC=2;AN=190;BQB=0.928372;DP=2986;DP4=1117,1743,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49429e-17;MQSB=0.9862;RPB=0.886055;SGB=103.624;VDB=0.355891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.5:18775362 chr05:018775362 0 W/18775362-18775362 FN2310 SNP G -> A AC=1;AN=192;BQB=0.985391;DP=4496;DP4=2077,1869,14,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.68851e-09;MQSB=0.233151;RPB=0.794819;SGB=81.1609;VDB=0.539981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1713-S.SNP.5:18778379 chr05:018778379 0 W/18778379-18778379 FN1713-S SNP C -> T AC=2;AN=188;BQB=0.252619;DP=3155;DP4=1553,1538,14,14;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0703645;MQB=0.09726;MQSB=1.31521e-39;RPB=0.937235;SGB=89.1337;VDB=0.432076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.5:18780286 chr05:018780286 0 W/18780286-18780286 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.949371;DP=4401;DP4=2119,2078,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.90569e-07;MQSB=0.999864;RPB=0.926025;SGB=36.5539;VDB=0.79047;EFF=INTRON(MODIFIER||||494|LOC_Os05g32210|protein_coding|CODING|LOC_Os05g32210.1|2|1) FN1220-S.SNP.5:18782297 chr05:018782297 0 W/18782297-18782297 FN1220-S Single Base Substitution G-A STOP_GAINED HET LOC_Os05g32210 NAD kinase, putative, expressed SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. W466-5-1.SNP.5:18785684 chr05:018785684 0 W/18785684-18785684 W466-5-1 Single Base Substitution A-G INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1108-S.SNP.5:18788689 chr05:018788689 0 W/18788689-18788689 FN1108-S Single Base Substitution C-T INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN947-S.SNP.5:18795069 chr05:018795069 0 W/18795069-18795069 FN947-S Single Base Substitution C-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1176-S.SNP.5:18795668 chr05:018795668 0 W/18795668-18795668 FN1176-S Single Base Substitution C-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3319-S.SNP.5:18805385 chr05:018805385 0 W/18805385-18805385 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.973685;DP=3391;DP4=1548,1745,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29238e-14;MQSB=0.999369;RPB=0.835906;SGB=78.0093;VDB=0.540121;EFF=INTRON(MODIFIER||||245|LOC_Os05g32250|protein_coding|CODING|LOC_Os05g32250.1|1|1) FN1233-S.SNP.5:18808061 chr05:018808061 0 W/18808061-18808061 FN1233-S Single Base Substitution A-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3482-S.SNP.5:18808734 chr05:018808734 0 W/18808734-18808734 FN3482-S SNP G -> C AC=1;AN=184;BQB=0.986886;DP=2894;DP4=1462,1349,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.66952e-09;MQSB=0.707931;RPB=0.996816;SGB=46.3132;VDB=0.155125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.5:18810407 chr05:018810407 0 W/18810407-18810407 FN-175 Single Base Substitution A-C INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3534-S.SNP.5:18812554 chr05:018812554 0 W/18812554-18812554 FN3534-S SNP G -> T AC=2;AN=188;BQB=0.909347;DP=2659;DP4=1101,1480,9,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.63596e-13;MQSB=0.421005;RPB=0.996709;SGB=98.9552;VDB=0.894359;EFF=INTRON(MODIFIER||||314|LOC_Os05g32270|protein_coding|CODING|LOC_Os05g32270.1|1|1) FN2497.SNP.5:18814224 chr05:018814224 0 W/18814224-18814224 FN2497 SNP T -> G AC=2;AN=200;BQB=0.998106;DP=5080;DP4=2393,2411,16,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.16222e-22;MQSB=0.988253;RPB=0.997052;SGB=144.819;VDB=0.894021;EFF=INTRON(MODIFIER||||314|LOC_Os05g32270|protein_coding|CODING|LOC_Os05g32270.1|3|1),INTRON(MODIFIER||||260|LOC_Os05g32270|protein_coding|CODING|LOC_Os05g32270.2|2|1) FN1630-S.SNP.5:18819226 chr05:018819226 0 W/18819226-18819226 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2594-S.SNP.5:18821817 chr05:018821817 0 W/18821817-18821817 FN2594-S SNP A -> G AC=1;AN=198;BQB=0.777022;DP=4412;DP4=2346,1804,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.186083;MQB=0.0273032;MQSB=0;RPB=0.303285;SGB=-143.81;VDB=0.0644601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.5:18823270 chr05:018823270 0 W/18823270-18823270 FN3697-S SNP G -> A AC=1;AN=190;BQB=0.930147;DP=2534;DP4=1189,1254,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00299015;MQSB=0.980914;RPB=0.963165;SGB=18.3316;VDB=0.991072;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C1039|1083|LOC_Os05g32290|protein_coding|CODING|LOC_Os05g32290.1|5|1) FN3707-S.SNP.5:18823852 chr05:018823852 0 W/18823852-18823852 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.988967;DP=3656;DP4=1250,2224,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=18;MQ0F=0.299508;MQB=0.132594;MQSB=2.78858e-43;RPB=0.221116;SGB=67.3108;VDB=0.529791;EFF=INTRON(MODIFIER||||1083|LOC_Os05g32290|protein_coding|CODING|LOC_Os05g32290.1|4|1) FN4152-S.SNP.5:18828813 chr05:018828813 0 W/18828813-18828813 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.984249;DP=2081;DP4=1154,822,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.89223e-09;MQSB=0.105165;RPB=0.979615;SGB=70.0854;VDB=0.0902494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.5:18832099 chr05:018832099 0 W/18832099-18832099 FN3630-S SNP A -> T AC=1;AN=186;BQB=0.7332;DP=938;DP4=287,471,2,5;HOB=5.78101e-05;ICB=0.000116242;MQ=42;MQ0F=0;MQB=0.52364;MQSB=1.97509e-22;RPB=0.0938514;SGB=14.7784;VDB=0.568173;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.5:18832550 chr05:018832550 0 W/18832550-18832550 FN1290-S Single Base Substitution G-A INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN630-S.SNP.5:18833101 chr05:018833101 0 W/18833101-18833101 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN4009-S.SNP.5:18834423 chr05:018834423 0 W/18834423-18834423 FN4009-S SNP T -> A AC=2;AN=168;BQB=0.608592;DP=2612;DP4=1337,1181,11,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.48863e-08;MQSB=0.920143;RPB=0.493299;SGB=51.902;VDB=0.693102;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.5:18836457 chr05:018836457 0 W/18836457-18836457 FN-316 Single Base Substitution G-A INTERGENIC HOMO SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-151.SNP.5:18840949 chr05:018840949 0 W/18840949-18840949 FN-151 Single Base Substitution C-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN819-S.SNP.5:18840978 chr05:018840978 0 W/18840978-18840978 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2383.SNP.5:18850878 chr05:018850878 0 W/18850878-18850878 FN2383 SNP G -> A AC=2;AN=192;BQB=0.899063;DP=4891;DP4=1882,2674,14,24;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0;MQB=1.8419e-05;MQSB=4.90486e-16;RPB=0.683357;SGB=125.324;VDB=0.499376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.5:18850878 chr05:018850878 0 W/18850878-18850878 FN2489 SNP G -> A AC=2;AN=200;BQB=0.92436;DP=4915;DP4=1847,2742,17,25;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0;MQB=2.17938e-07;MQSB=2.10163e-06;RPB=0.52539;SGB=48.014;VDB=0.427301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.5:18850878 chr05:018850878 0 W/18850878-18850878 FN3548-S SNP G -> A AC=2;AN=188;BQB=0.921621;DP=2957;DP4=1272,1588,4,17;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0;MQB=0.00148739;MQSB=0.446897;RPB=0.24251;SGB=89.8686;VDB=0.154229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.5:18853320 chr05:018853320 0 W/18853320-18853320 FN1304-S Single Base Substitution G-A INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN3938-S.SNP.5:18855966 chr05:018855966 0 W/18855966-18855966 FN3938-S SNP A -> T AC=1;AN=158;BQB=0.788258;DP=3988;DP4=1792,2024,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=15;MQ0F=0.448094;MQB=0.199228;MQSB=0;RPB=0.976056;SGB=-60.8948;VDB=0.740294;EFF=INTRON(MODIFIER||||530|LOC_Os05g32340|protein_coding|CODING|LOC_Os05g32340.1|2|1) FN2260-S.SNP.5:18856384 chr05:018856384 0 W/18856384-18856384 FN2260-S SNP T -> A AC=1;AN=190;BQB=0.491464;DP=4447;DP4=2293,1874,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.0487969;MQB=0.238869;MQSB=6.87027e-28;RPB=0.971261;SGB=126.511;VDB=0.625485;EFF=INTRON(MODIFIER||||530|LOC_Os05g32340|protein_coding|CODING|LOC_Os05g32340.1|2|1) FN-116.SNP.5:18861328 chr05:018861328 0 W/18861328-18861328 FN-116 Single Base Substitution A-G INTERGENIC HOMO SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN1399-S.SNP.5:18870550 chr05:018870550 0 W/18870550-18870550 FN1399-S Single Base Substitution G-C INTRON HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3775-S.SNP.5:18878657 chr05:018878657 0 W/18878657-18878657 FN3775-S SNP C -> G AC=2;AN=190;BQB=0.920188;DP=2644;DP4=1313,1216,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.22688e-17;MQSB=0.984479;RPB=0.962528;SGB=59.414;VDB=0.667464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.5:18880933 chr05:018880933 0 W/18880933-18880933 FN1381-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g32380 phospholipase, putative, expressed SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN427-S.SNP.5:18882989 chr05:018882989 0 W/18882989-18882989 FN427-S Single Base Substitution C-G INTRON HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1459-S.SNP.5:18883147 chr05:018883147 0 W/18883147-18883147 FN1459-S Single Base Substitution A-G INTRON HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN4103-S.SNP.5:18894515 chr05:018894515 0 W/18894515-18894515 FN4103-S SNP G -> A AC=1;AN=182;BQB=0.944663;DP=2983;DP4=1474,1439,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.39542e-06;MQSB=0.999999;RPB=0.948147;SGB=44.1115;VDB=0.704051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R191H|926|LOC_Os05g32390|protein_coding|CODING|LOC_Os05g32390.1|2|1) FN1206-S.SNP.5:18899268 chr05:018899268 0 W/18899268-18899268 FN1206-S Single Base Substitution C-T INTRON HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN852-S.SNP.5:18899674 chr05:018899674 0 W/18899674-18899674 FN852-S Single Base Substitution G-A INTRON HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN1475-S.SNP.5:18902586 chr05:018902586 0 W/18902586-18902586 FN1475-S Single Base Substitution A-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2612-S.SNP.5:18912125 chr05:018912125 0 W/18912125-18912125 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.620858;DP=4237;DP4=1840,2084,18,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02151e-17;MQSB=0.99207;RPB=0.274865;SGB=30.086;VDB=0.499443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.5:18916693 chr05:018916693 0 W/18916693-18916693 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.999123;DP=2591;DP4=1216,1271,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.755e-07;MQSB=0.999629;RPB=0.602175;SGB=28.9929;VDB=0.935526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.5:18923706 chr05:018923706 0 W/18923706-18923706 FN1442-S Single Base Substitution C-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3970-S.SNP.5:18924297 chr05:018924297 0 W/18924297-18924297 FN3970-S SNP A -> G AC=2;AN=168;BQB=0.96074;DP=2931;DP4=1456,1326,24,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.07664e-20;MQSB=0.994078;RPB=0.168334;SGB=158.512;VDB=0.172289;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.5:18941752 chr05:018941752 0 W/18941752-18941752 FN785-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3738-S.SNP.5:18943990 chr05:018943990 0 W/18943990-18943990 FN3738-S SNP T -> A AC=2;AN=190;BQB=0.971719;DP=3064;DP4=1395,1583,13,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.95625e-16;MQSB=0.991319;RPB=0.550082;SGB=59.414;VDB=0.396954;EFF=INTRON(MODIFIER||||190|LOC_Os05g32450|protein_coding|CODING|LOC_Os05g32450.1|1|1) FN3287-S.SNP.5:18945041 chr05:018945041 0 W/18945041-18945041 FN3287-S SNP C -> A AC=1;AN=184;BQB=0.882488;DP=2772;DP4=1280,1344,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52233e-08;MQSB=0.78347;RPB=0.174028;SGB=49.835;VDB=0.634609;EFF=INTRON(MODIFIER||||190|LOC_Os05g32450|protein_coding|CODING|LOC_Os05g32450.1|1|1) FN2665-S.SNP.5:18951325 chr05:018951325 0 W/18951325-18951325 FN2665-S SNP A -> G AC=1;AN=200;BQB=0.106223;DP=4803;DP4=2459,2059,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.25477e-18;MQSB=0.960017;RPB=0.75519;SGB=30.3571;VDB=0.20991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.5:18953744 chr05:018953744 0 W/18953744-18953744 FN3606-S SNP C -> A AC=1;AN=190;BQB=0.245561;DP=2669;DP4=1342,1111,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05269e-07;MQSB=0.45749;RPB=0.229751;SGB=-15.4375;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.5:18953981 chr05:018953981 0 W/18953981-18953981 FN-361 Single Base Substitution T-C INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN-353.SNP.5:18958457 chr05:018958457 0 W/18958457-18958457 FN-353 Single Base Substitution C-T INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-95.SNP.5:18959948 chr05:018959948 0 W/18959948-18959948 FN-95 Single Base Substitution A-G INTRON HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3516-S.SNP.5:18966630 chr05:018966630 0 W/18966630-18966630 FN3516-S SNP A -> C AC=2;AN=188;BQB=0.86311;DP=2971;DP4=1363,1502,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.12723e-11;MQSB=0.819825;RPB=0.959831;SGB=108.042;VDB=0.380832;EFF=INTRON(MODIFIER||||501|LOC_Os05g32470|protein_coding|CODING|LOC_Os05g32470.1|3|1) FN2554-S.SNP.5:18970562 chr05:018970562 0 W/18970562-18970562 FN2554-S SNP G -> C AC=1;AN=198;BQB=0.994593;DP=3096;DP4=1366,1542,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0;MQB=0.0299658;MQSB=0.000387704;RPB=0.664101;SGB=49.5489;VDB=0.134895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G75R|740|LOC_Os05g32480|protein_coding|CODING|LOC_Os05g32480.1|1|1),UTR_5_PRIME(MODIFIER||318||51|LOC_Os05g32474|protein_coding|CODING|LOC_Os05g32474.1|1|1) FN2419.SNP.5:18970934 chr05:018970934 0 W/18970934-18970934 FN2419 SNP C -> T AC=1;AN=200;BQB=0.972989;DP=4475;DP4=2331,1796,9,7;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=0.0221902;MQSB=0.000790882;RPB=0.594815;SGB=26.8797;VDB=0.898875;EFF=INTRON(MODIFIER||||740|LOC_Os05g32480|protein_coding|CODING|LOC_Os05g32480.1|1|1) FN1634-S.SNP.5:18978342 chr05:018978342 0 W/18978342-18978342 FN1634-S Single Base Substitution T-A INTERGENIC Homo SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN-272.SNP.5:18985889 chr05:018985889 0 W/18985889-18985889 FN-272 Single Base Substitution T-G INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2438.SNP.5:18986507 chr05:018986507 0 W/18986507-18986507 FN2438 SNP G -> A AC=1;AN=200;BQB=0.683268;DP=4857;DP4=1861,2687,8,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0419e-14;MQSB=0.99873;RPB=0.660475;SGB=28.752;VDB=0.629649;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.5:18987280 chr05:018987280 0 W/18987280-18987280 FN622-S Single Base Substitution A-C INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-131.SNP.5:19020844 chr05:019020844 0 W/19020844-19020844 FN-131 Single Base Substitution G-C INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN4344-S.SNP.5:19020844 chr05:019020844 0 W/19020844-19020844 FN4344-S SNP G -> C AC=2;AN=170;BQB=0.998422;DP=996;DP4=922,47,10,0;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.92979e-05;MQSB=0.0119303;RPB=0.98274;SGB=38.987;VDB=0.419414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.5:19022410 chr05:019022410 0 W/19022410-19022410 FN1695-S SNP C -> T AC=1;AN=188;BQB=0.724086;DP=2547;DP4=1335,1193,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.02523e-05;MQSB=0.96177;RPB=0.707561;SGB=13.3597;VDB=0.169734;EFF=UTR_3_PRIME(MODIFIER||335||576|LOC_Os05g32544|protein_coding|CODING|LOC_Os05g32544.2|4|1),INTRON(MODIFIER||||581|LOC_Os05g32544|protein_coding|CODING|LOC_Os05g32544.1|4|1) FN2339.SNP.5:19030586 chr05:019030586 0 W/19030586-19030586 FN2339 SNP C -> T AC=1;AN=192;BQB=0.744407;DP=3587;DP4=2146,1222,9,4;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=0.0270089;MQSB=0.761707;RPB=0.0963488;SGB=53.7748;VDB=0.768351;EFF=UTR_5_PRIME(MODIFIER||76||581|LOC_Os05g32544|protein_coding|CODING|LOC_Os05g32544.1|1|1),UTR_5_PRIME(MODIFIER||76||576|LOC_Os05g32544|protein_coding|CODING|LOC_Os05g32544.2|1|1) FN3515-S.SNP.5:19032712 chr05:019032712 0 W/19032712-19032712 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.988544;DP=2792;DP4=1466,1254,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000716332;MQB=7.79018e-08;MQSB=0.971748;RPB=0.676404;SGB=62.6088;VDB=0.181412;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.5:19033293 chr05:019033293 0 W/19033293-19033293 FN522-S Single Base Substitution T-C INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1252-S.SNP.5:19033554 chr05:019033554 0 W/19033554-19033554 FN1252-S Single Base Substitution C-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN4143-S.SNP.5:19035058 chr05:019035058 0 W/19035058-19035058 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.996475;DP=2564;DP4=1101,1369,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.25158e-08;MQSB=0.99326;RPB=0.589138;SGB=45.206;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.5:19037076 chr05:019037076 0 W/19037076-19037076 FN-353 Single Base Substitution G-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3800-S.SNP.5:19037493 chr05:019037493 0 W/19037493-19037493 FN3800-S SNP G -> A AC=2;AN=190;BQB=0.963506;DP=2706;DP4=1380,1215,15,9;HOB=0.020831;ICB=0.494793;MQ=26;MQ0F=0.0968219;MQB=0.989511;MQSB=0.0410776;RPB=0.510121;SGB=75.1932;VDB=0.959806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.5:19039232 chr05:019039232 0 W/19039232-19039232 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.994732;DP=2685;DP4=1464,1117,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=0.00177801;MQSB=0.987612;RPB=0.680137;SGB=62.3078;VDB=0.538056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.5:19040523 chr05:019040523 0 W/19040523-19040523 FN2392 SNP G -> A AC=1;AN=200;BQB=0.539619;DP=3566;DP4=1568,1788,6,7;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0053281;MQB=0.00119818;MQSB=0.0140387;RPB=0.981034;SGB=54.2646;VDB=0.228208;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L39|243|LOC_Os05g32560|protein_coding|CODING|LOC_Os05g32560.1|1|1) FN3368-S.SNP.5:19041069 chr05:019041069 0 W/19041069-19041069 FN3368-S SNP G -> T AC=1;AN=184;BQB=0.727578;DP=3429;DP4=1299,1970,2,12;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.00816565;MQB=0.0588379;MQSB=0.84033;RPB=0.996317;SGB=39.2697;VDB=0.751229;EFF=INTRON(MODIFIER||||243|LOC_Os05g32560|protein_coding|CODING|LOC_Os05g32560.1|1|1) FN857-S.SNP.5:19043028 chr05:019043028 0 W/19043028-19043028 FN857-S Single Base Substitution A-G INTRON HOMO SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2438.SNP.5:19044866 chr05:019044866 0 W/19044866-19044866 FN2438 SNP A -> G AC=1;AN=200;BQB=0.3465;DP=4360;DP4=1673,2303,16,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=9.55961e-06;MQSB=0.804864;RPB=0.980622;SGB=63.3521;VDB=0.0886631;EFF=INTRON(MODIFIER||||243|LOC_Os05g32560|protein_coding|CODING|LOC_Os05g32560.1|3|1) FN1003-S.SNP.5:19046377 chr05:019046377 0 W/19046377-19046377 FN1003-S Single Base Substitution A-C INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN3897-S.SNP.5:19050524 chr05:019050524 0 W/19050524-19050524 FN3897-S SNP G -> A AC=2;AN=158;BQB=0.994906;DP=2638;DP4=1236,1230,20,17;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=2.54557e-15;MQSB=0.0267444;RPB=0.726776;SGB=73.5771;VDB=0.666537;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.5:19058606 chr05:019058606 0 W/19058606-19058606 FN500-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1451-S.SNP.5:19058981 chr05:019058981 0 W/19058981-19058981 FN1451-S Single Base Substitution C-T INTRON HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2673-S.SNP.5:19061077 chr05:019061077 0 W/19061077-19061077 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.944437;DP=5008;DP4=2315,2505,5,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29916e-14;MQSB=0.948403;RPB=0.811436;SGB=-10.6896;VDB=0.533198;EFF=UTR_5_PRIME(MODIFIER||20||830|LOC_Os05g32570|protein_coding|CODING|LOC_Os05g32570.1|2|1) FN4312-S.SNP.5:19069240 chr05:019069240 0 W/19069240-19069240 FN4312-S SNP C -> T AC=1;AN=170;BQB=0.965367;DP=2689;DP4=1414,1167,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.000336542;MQSB=0.32567;RPB=0.984013;SGB=30.1021;VDB=0.421959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.5:19072390 chr05:019072390 0 W/19072390-19072390 FN1094-S Single Base Substitution T-A INTRON HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1094-S.SNP.5:19072391 chr05:019072391 0 W/19072391-19072391 FN1094-S Single Base Substitution G-A INTRON HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN705-S.SNP.5:19073740 chr05:019073740 0 W/19073740-19073740 FN705-S Single Base Substitution C-T INTRON HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN736-S.SNP.5:19074281 chr05:019074281 0 W/19074281-19074281 FN736-S Single Base Substitution T-A INTRON HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2661-S.SNP.5:19075320 chr05:019075320 0 W/19075320-19075320 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.992535;DP=4874;DP4=2210,2408,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76166e-07;MQSB=0.385312;RPB=0.6515;SGB=37.3004;VDB=0.351553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R395K|529|LOC_Os05g32580|protein_coding|CODING|LOC_Os05g32580.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R395K|440|LOC_Os05g32580|protein_coding|CODING|LOC_Os05g32580.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R395K|440|LOC_Os05g32580|protein_coding|CODING|LOC_Os05g32580.3|8|1) FN2739-S.SNP.5:19085821 chr05:019085821 0 W/19085821-19085821 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.722784;DP=4742;DP4=2162,2379,13,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.11554e-07;MQSB=0.150422;RPB=0.500911;SGB=22.3313;VDB=0.259112;EFF=INTRON(MODIFIER||||424|LOC_Os05g32600|protein_coding|CODING|LOC_Os05g32600.1|3|1),INTRON(MODIFIER||||279|LOC_Os05g32600|protein_coding|CODING|LOC_Os05g32600.2|3|1) FN418-S.SNP.5:19100569 chr05:019100569 0 W/19100569-19100569 FN418-S Single Base Substitution G-T INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN806-S.SNP.5:19103772 chr05:019103772 0 W/19103772-19103772 FN806-S Single Base Substitution A-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN2698-S.SNP.5:19106505 chr05:019106505 0 W/19106505-19106505 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.870553;DP=4914;DP4=2110,2526,12,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.04187e-09;MQSB=6.29818e-11;RPB=0.979546;SGB=47.7211;VDB=0.0892878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.5:19107112 chr05:019107112 0 W/19107112-19107112 FN1184-S Single Base Substitution T-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN4151-S.SNP.5:19110723 chr05:019110723 0 W/19110723-19110723 FN4151-S SNP T -> C AC=1;AN=170;BQB=0.917721;DP=2743;DP4=1238,1423,9,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.0753e-15;MQSB=0.942316;RPB=0.0601956;SGB=96.7413;VDB=0.0137489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T110A|330|LOC_Os05g32630|protein_coding|CODING|LOC_Os05g32630.1|2|1) FN4151-S.SNP.5:19110731 chr05:019110731 0 W/19110731-19110731 FN4151-S SNP G -> C AC=1;AN=170;BQB=0.941118;DP=2779;DP4=1255,1445,10,16;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.37404e-17;MQSB=0.913131;RPB=0.271138;SGB=79.6325;VDB=0.0450905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S107C|330|LOC_Os05g32630|protein_coding|CODING|LOC_Os05g32630.1|2|1) FN3368-S.SNP.5:19111623 chr05:019111623 0 W/19111623-19111623 FN3368-S SNP G -> A AC=2;AN=184;BQB=0.980634;DP=2667;DP4=1275,1273,20,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.84594e-15;MQSB=0.500876;RPB=0.279685;SGB=85.0529;VDB=0.27971;EFF=INTRON(MODIFIER||||330|LOC_Os05g32630|protein_coding|CODING|LOC_Os05g32630.1|1|1) FN-159.SNP.5:19113351 chr05:019113351 0 W/19113351-19113351 FN-159 Single Base Substitution C-T INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN1206-S.SNP.5:19113351 chr05:019113351 0 W/19113351-19113351 FN1206-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN911-S.SNP.5:19126425 chr05:019126425 0 W/19126425-19126425 FN911-S Single Base Substitution C-T INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2308.SNP.5:19126989 chr05:019126989 0 W/19126989-19126989 FN2308 SNP C -> T AC=1;AN=192;BQB=0.994195;DP=5058;DP4=2446,2316,8,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15882e-14;MQSB=0.994407;RPB=0.330464;SGB=51.9931;VDB=0.0426659;EFF=INTRON(MODIFIER||||260|LOC_Os05g32670|protein_coding|CODING|LOC_Os05g32670.1|1|1) FN2673-S.SNP.5:19130123 chr05:019130123 0 W/19130123-19130123 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.708745;DP=4370;DP4=1698,2434,3,9;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.00874036;MQSB=0.022267;RPB=0.673951;SGB=33.0593;VDB=0.0306322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.5:19134256 chr05:019134256 0 W/19134256-19134256 FN2171-S SNP G -> C AC=1;AN=168;BQB=0.191484;DP=3963;DP4=2237,1668,17,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.36852e-10;MQSB=0.963386;RPB=0.994858;SGB=62.1945;VDB=0.252715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D171H|324|LOC_Os05g32680|protein_coding|CODING|LOC_Os05g32680.1|5|1),SPLICE_SITE_REGION(LOW||||324|LOC_Os05g32680|protein_coding|CODING|LOC_Os05g32680.1|5|1) FN3115-S.SNP.5:19136494 chr05:019136494 0 W/19136494-19136494 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.9487;DP=3293;DP4=1869,1290,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15779e-08;MQSB=0.883653;RPB=0.690377;SGB=66.8296;VDB=0.446847;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.5:19136883 chr05:019136883 0 W/19136883-19136883 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.999946;DP=3852;DP4=2146,1589,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000259605;MQB=0.000471075;MQSB=0.932671;RPB=0.940687;SGB=53.5223;VDB=0.928586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.5:19144570 chr05:019144570 0 W/19144570-19144570 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.496487;DP=2194;DP4=905,931,10,14;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=1.03208e-11;MQSB=0.0050997;RPB=0.752039;SGB=14.4112;VDB=0.682837;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.5:19144926 chr05:019144926 0 W/19144926-19144926 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-176.SNP.5:19145690 chr05:019145690 0 W/19145690-19145690 FN-176 Single Base Substitution C-T INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN_769-4-1.SNP.5:19149242 chr05:019149242 0 W/19149242-19149242 FN_769-4-1 Single Base Substitution C-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2725-S.SNP.5:19150799 chr05:019150799 0 W/19150799-19150799 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.397707;DP=5328;DP4=2584,2489,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.19906e-10;MQSB=0.540328;RPB=0.403063;SGB=-11.2947;VDB=0.252715;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L365|916|LOC_Os05g32700|protein_coding|CODING|LOC_Os05g32700.1|6|1) FN-106.SNP.5:19150984 chr05:019150984 0 W/19150984-19150984 FN-106 Single Base Substitution A-G INTRON HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN_769-4-1.SNP.5:19153082 chr05:019153082 0 W/19153082-19153082 FN_769-4-1 Single Base Substitution C-T Homo LOC_Os05g32700 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN4247-S.SNP.5:19161752 chr05:019161752 0 W/19161752-19161752 FN4247-S SNP G -> A AC=1;AN=170;BQB=0.645098;DP=2597;DP4=1271,1243,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.19116e-06;MQSB=0.94893;RPB=0.362535;SGB=47.8722;VDB=0.705512;EFF=INTRON(MODIFIER||||767|LOC_Os05g32720|protein_coding|CODING|LOC_Os05g32720.1|3|1) FN4064-S.SNP.5:19177565 chr05:019177565 0 W/19177565-19177565 FN4064-S SNP C -> T AC=2;AN=168;BQB=0.991475;DP=2532;DP4=1607,815,12,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.0688e-09;MQSB=0.00335133;RPB=0.933103;SGB=41.6096;VDB=0.274419;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.5:19177566 chr05:019177566 0 W/19177566-19177566 FN4064-S SNP T -> C AC=2;AN=168;BQB=0.917514;DP=2539;DP4=1587,816,11,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.49054e-09;MQSB=0.00610228;RPB=0.876509;SGB=41.6096;VDB=0.189068;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.5:19187046 chr05:019187046 0 W/19187046-19187046 FN1280-S Single Base Substitution A-G INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2092-S.SNP.5:19187674 chr05:019187674 0 W/19187674-19187674 FN2092-S SNP G -> A AC=1;AN=168;BQB=0.134765;DP=3359;DP4=1545,1770,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00267937;MQB=0.0284697;MQSB=0.913651;RPB=0.0414791;SGB=-90.3546;VDB=0.634501;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.5:19191951 chr05:019191951 0 W/19191951-19191951 FN-232 Single Base Substitution G-A INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN4080-S.SNP.5:19199672 chr05:019199672 0 W/19199672-19199672 FN4080-S SNP T -> G AC=1;AN=180;BQB=0.998355;DP=2985;DP4=1560,1346,6,7;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=1.80368e-07;MQSB=0.996321;RPB=0.34972;SGB=35.6277;VDB=0.650298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.5:19201354 chr05:019201354 0 W/19201354-19201354 FN3599-S SNP T -> A AC=1;AN=188;BQB=0.998785;DP=2516;DP4=1199,1241,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44552e-07;MQSB=0.896867;RPB=0.494937;SGB=28.8977;VDB=0.955685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.5:19201355 chr05:019201355 0 W/19201355-19201355 FN3599-S SNP A -> C AC=1;AN=188;BQB=0.846379;DP=2515;DP4=1185,1216,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.3782e-07;MQSB=0.978722;RPB=0.693677;SGB=28.8977;VDB=0.918943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.5:19213372 chr05:019213372 0 W/19213372-19213372 FN3673-S SNP G -> T AC=1;AN=190;BQB=0.897925;DP=2774;DP4=1576,1060,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.82895e-10;MQSB=0.99302;RPB=0.854171;SGB=46.7622;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.5:19215132 chr05:019215132 0 W/19215132-19215132 FN_N1-116-1 Single Base Substitution A-G HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN-223.SNP.5:19219343 chr05:019219343 0 W/19219343-19219343 FN-223 Single Base Substitution C-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2587-S.SNP.5:19225272 chr05:019225272 0 W/19225272-19225272 FN2587-S SNP A -> C AC=2;AN=198;BQB=0.158345;DP=4126;DP4=1788,2038,29,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.6656e-29;MQSB=0.981277;RPB=0.987419;SGB=224.163;VDB=0.0147293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.5:19225274 chr05:019225274 0 W/19225274-19225274 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.997177;DP=4145;DP4=1865,2066,29,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.1421e-31;MQSB=0.961783;RPB=0.961218;SGB=180.359;VDB=0.00983721;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.5:19229315 chr05:019229315 0 W/19229315-19229315 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1557-S.SNP.5:19229316 chr05:019229316 0 W/19229316-19229316 FN1557-S Single Base Substitution G-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3820-S.SNP.5:19231385 chr05:019231385 0 W/19231385-19231385 FN3820-S SNP C -> T AC=2;AN=190;BQB=0.995861;DP=2676;DP4=1451,1108,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.08932e-11;MQSB=0.886044;RPB=0.598286;SGB=76.4186;VDB=0.821174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M69I|202|LOC_Os05g32840|protein_coding|CODING|LOC_Os05g32840.1|1|1) FN3564-S.SNP.5:19232756 chr05:019232756 0 W/19232756-19232756 FN3564-S SNP T -> C AC=2;AN=188;BQB=0.75219;DP=4111;DP4=1781,2144,19,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00024325;MQB=2.33952e-30;MQSB=0.834187;RPB=0.31946;SGB=167.086;VDB=0.112171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.5:19237453 chr05:019237453 0 W/19237453-19237453 FN1549-S Single Base Substitution A-T INTRON HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2339.SNP.5:19239047 chr05:019239047 0 W/19239047-19239047 FN2339 SNP G -> A AC=1;AN=192;BQB=0.467043;DP=5346;DP4=2699,2342,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.20743e-14;MQSB=0.846918;RPB=0.554937;SGB=54.5574;VDB=0.184476;EFF=INTRON(MODIFIER||||528|LOC_Os05g32850|protein_coding|CODING|LOC_Os05g32850.1|12|1) FN4149-S.SNP.5:19244645 chr05:019244645 0 W/19244645-19244645 FN4149-S SNP A -> G AC=1;AN=170;BQB=0.682097;DP=2086;DP4=1070,952,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000166759;MQSB=0.908905;RPB=0.99702;SGB=38.987;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.5:19251287 chr05:019251287 0 W/19251287-19251287 FN2681-S SNP G -> T AC=1;AN=200;BQB=0.130862;DP=4984;DP4=2484,2247,13,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.58575e-18;MQSB=0.933124;RPB=0.946281;SGB=71.1676;VDB=0.541377;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.5:19262218 chr05:019262218 0 W/19262218-19262218 FN769-S Single Base Substitution T-G INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN4011-S.SNP.5:19278885 chr05:019278885 0 W/19278885-19278885 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.765151;DP=2674;DP4=1047,1509,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.95123e-10;MQSB=0.980832;RPB=0.82491;SGB=29.4772;VDB=0.4108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1700-S.SNP.5:19283975 chr05:019283975 0 W/19283975-19283975 FN1700-S SNP A -> G AC=1;AN=188;BQB=0.00523991;DP=2033;DP4=1189,810,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0010777;MQSB=0.666188;RPB=0.900116;SGB=-81.5271;VDB=0.650456;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.5:19288184 chr05:019288184 0 W/19288184-19288184 FN-93 Single Base Substitution G-A INTRON HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2351.SNP.5:19289245 chr05:019289245 0 W/19289245-19289245 FN2351 SNP T -> C AC=1;AN=192;BQB=0.979885;DP=4788;DP4=2157,2074,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0110693;MQB=1.43639e-05;MQSB=3.18196e-06;RPB=0.988781;SGB=51.9931;VDB=0.499439;EFF=INTRON(MODIFIER||||250|LOC_Os05g32920|protein_coding|CODING|LOC_Os05g32920.1|2|1) FN-156.SNP.5:19292856 chr05:019292856 0 W/19292856-19292856 FN-156 Single Base Substitution T-C INTRON HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN680-S.SNP.5:19296496 chr05:019296496 0 W/19296496-19296496 FN680-S Single Base Substitution T-A INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN680-S.SNP.5:19298917 chr05:019298917 0 W/19298917-19298917 FN680-S Single Base Substitution C-T INTRON HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN576-S.SNP.5:19309717 chr05:019309717 0 W/19309717-19309717 FN576-S Single Base Substitution G-A INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3552-S.SNP.5:19310522 chr05:019310522 0 W/19310522-19310522 FN3552-S SNP A -> T AC=1;AN=188;BQB=0.803276;DP=2424;DP4=1226,1133,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67353e-06;MQSB=0.998951;RPB=0.363171;SGB=35.9843;VDB=0.122248;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.5:19311969 chr05:019311969 0 W/19311969-19311969 FN985-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g32960 expressed protein SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2295.SNP.5:19334041 chr05:019334041 0 W/19334041-19334041 FN2295 SNP C -> T AC=1;AN=192;BQB=0.808521;DP=4767;DP4=2412,1879,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.85978e-09;MQSB=0.787473;RPB=0.884775;SGB=-37.5061;VDB=0.519244;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S6|99|LOC_Os05g32980|protein_coding|CODING|LOC_Os05g32980.1|1|1) FN1205-S.SNP.5:19335242 chr05:019335242 0 W/19335242-19335242 FN1205-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2090-S.SNP.5:19335557 chr05:019335557 0 W/19335557-19335557 FN2090-S SNP A -> G AC=1;AN=168;BQB=0.999864;DP=3438;DP4=1700,1714,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.55829e-06;MQSB=0.967788;RPB=0.706857;SGB=27.8864;VDB=0.0491895;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.5:19337003 chr05:019337003 0 W/19337003-19337003 FN544-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g32990 expressed protein SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2118-S.SNP.5:19341160 chr05:019341160 0 W/19341160-19341160 FN2118-S SNP A -> G AC=2;AN=168;BQB=0.548124;DP=3935;DP4=1991,1867,23,36;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.67752e-30;MQSB=0.909355;RPB=0.969098;SGB=-124.559;VDB=0.144668;EFF=INTRON(MODIFIER||||355|LOC_Os05g33000|protein_coding|CODING|LOC_Os05g33000.1|3|1) FN3427-S.SNP.5:19346981 chr05:019346981 0 W/19346981-19346981 FN3427-S SNP C -> A AC=1;AN=184;BQB=0.589308;DP=2364;DP4=1218,1074,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90739e-10;MQSB=0.999871;RPB=0.807306;SGB=42.7914;VDB=0.21251;EFF=UTR_3_PRIME(MODIFIER||11||542|LOC_Os05g33020|protein_coding|CODING|LOC_Os05g33020.1|12|1) FN3427-S.SNP.5:19346983 chr05:019346983 0 W/19346983-19346983 FN3427-S SNP T -> A AC=1;AN=184;BQB=0.987567;DP=2364;DP4=1206,1089,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.24692e-09;MQSB=0.996788;RPB=0.996185;SGB=53.2642;VDB=0.141223;EFF=UTR_3_PRIME(MODIFIER||9||542|LOC_Os05g33020|protein_coding|CODING|LOC_Os05g33020.1|12|1) FN-175.SNP.5:19351564 chr05:019351564 0 W/19351564-19351564 FN-175 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-269.SNP.5:19354864 chr05:019354864 0 W/19354864-19354864 FN-269 Single Base Substitution G-T INTRON HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN782-S.SNP.5:19361446 chr05:019361446 0 W/19361446-19361446 FN782-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g33030 kinesin motor domain containing protein, putative, expressed SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN2754-S.SNP.5:19378677 chr05:019378677 0 W/19378677-19378677 FN2754-S SNP G -> T AC=2;AN=200;BQB=0.479715;DP=5085;DP4=2309,2491,22,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.78187e-27;MQSB=0.528793;RPB=0.970731;SGB=159.24;VDB=0.714027;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.5:19379737 chr05:019379737 0 W/19379737-19379737 FN4130-S SNP G -> A AC=1;AN=182;BQB=0.974033;DP=3021;DP4=1475,1449,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.06212e-07;MQSB=0.793045;RPB=0.904267;SGB=44.1115;VDB=0.705435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.5:19382124 chr05:019382124 0 W/19382124-19382124 FN1470-S Single Base Substitution G-A INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3399-S.SNP.5:19395763 chr05:019395763 0 W/19395763-19395763 FN3399-S SNP C -> A AC=1;AN=184;BQB=0.931642;DP=2550;DP4=1135,1347,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000282001;MQSB=0.992185;RPB=0.404643;SGB=18.1394;VDB=0.215483;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.5:19398991 chr05:019398991 0 W/19398991-19398991 FN4023-S SNP C -> A AC=1;AN=168;BQB=0.921524;DP=2844;DP4=1429,1285,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.38023e-08;MQSB=0.890274;RPB=0.373169;SGB=-17.5266;VDB=0.11374;EFF=UTR_5_PRIME(MODIFIER||20||491|LOC_Os05g33080|protein_coding|CODING|LOC_Os05g33080.1|1|1) FN2740-S.SNP.5:19400239 chr05:019400239 0 W/19400239-19400239 FN2740-S SNP C -> A AC=1;AN=200;BQB=0.995082;DP=4754;DP4=2222,2239,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40395e-18;MQSB=0.966422;RPB=0.37247;SGB=101.557;VDB=0.5201;EFF=INTRON(MODIFIER||||491|LOC_Os05g33080|protein_coding|CODING|LOC_Os05g33080.1|2|1) FN2735-S.SNP.5:19407161 chr05:019407161 0 W/19407161-19407161 FN2735-S SNP G -> T AC=1;AN=200;BQB=0.969203;DP=4445;DP4=2196,2029,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.94482e-11;MQSB=0.966062;RPB=0.593409;SGB=51.0851;VDB=0.0770073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.5:19407952 chr05:019407952 0 W/19407952-19407952 FN3324-S SNP A -> G AC=1;AN=184;BQB=0.970294;DP=1484;DP4=1206,216,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.32826e-05;MQSB=0.222467;RPB=0.251607;SGB=21.6609;VDB=0.558106;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.5:19408095 chr05:019408095 0 W/19408095-19408095 FN-66 Single Base Substitution A-C INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN979-S.SNP.5:19412882 chr05:019412882 0 W/19412882-19412882 FN979-S Single Base Substitution A-C INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN814-S.SNP.5:19424678 chr05:019424678 0 W/19424678-19424678 FN814-S Single Base Substitution A-T INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2740-S.SNP.5:19425955 chr05:019425955 0 W/19425955-19425955 FN2740-S SNP C -> A AC=1;AN=200;BQB=0.594794;DP=5168;DP4=2383,2449,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1542e-09;MQSB=0.704982;RPB=0.154947;SGB=63.4749;VDB=0.228077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.5:19428225 chr05:019428225 0 W/19428225-19428225 FN3387-S SNP C -> G AC=1;AN=184;BQB=0.893584;DP=2143;DP4=985,1007,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.83564e-06;MQSB=0.000131604;RPB=0.556287;SGB=20.7533;VDB=0.513919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.5:19428879 chr05:019428879 0 W/19428879-19428879 FN-137 Single Base Substitution A-G INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2184-S.SNP.5:19433116 chr05:019433116 0 W/19433116-19433116 FN2184-S SNP C -> T AC=1;AN=190;BQB=0.98421;DP=5022;DP4=2428,2232,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199124;MQB=2.8697e-12;MQSB=0.992202;RPB=0.859062;SGB=68.0854;VDB=0.169192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.5:19440501 chr05:019440501 0 W/19440501-19440501 FN1195-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2625-S.SNP.5:19443232 chr05:019443232 0 W/19443232-19443232 FN2625-S SNP A -> T AC=1;AN=200;BQB=0.33588;DP=5015;DP4=2380,2403,16,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19343e-19;MQSB=0.822757;RPB=0.392104;SGB=-88.9968;VDB=0.194549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.5:19445039 chr05:019445039 0 W/19445039-19445039 FN-55 Single Base Substitution A-C INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN_398-3-4-5.SNP.5:19456316 chr05:019456316 0 W/19456316-19456316 FN_398-3-4-5 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g33180 hypothetical protein SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN1531-S.SNP.5:19456539 chr05:019456539 0 W/19456539-19456539 FN1531-S Single Base Substitution A-G INTRON HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN-329.SNP.5:19456845 chr05:019456845 0 W/19456845-19456845 FN-329 Single Base Substitution T-C INTRON HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2711-S.SNP.5:19457504 chr05:019457504 0 W/19457504-19457504 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.981963;DP=5008;DP4=2355,2361,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.18269e-11;MQSB=0.903937;RPB=0.858717;SGB=29.4849;VDB=0.454079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.5:19457506 chr05:019457506 0 W/19457506-19457506 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.799384;DP=4980;DP4=2339,2389,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.53941e-11;MQSB=0.838195;RPB=0.993059;SGB=68.0801;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.5:19458873 chr05:019458873 0 W/19458873-19458873 FN2491 SNP C -> T AC=1;AN=200;BQB=0.997386;DP=4239;DP4=2211,1684,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235905;MQB=1.31089e-06;MQSB=0.883169;RPB=0.693274;SGB=-15.5309;VDB=0.146498;EFF=INTERGENIC(MODIFIER||||||||||1) FN-313.SNP.5:19460540 chr05:019460540 0 W/19460540-19460540 FN-313 Single Base Substitution G-A INTERGENIC HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN3473-S.SNP.5:19465067 chr05:019465067 0 W/19465067-19465067 FN3473-S SNP A -> G AC=1;AN=184;BQB=0.883017;DP=3542;DP4=2297,1126,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.24609e-11;MQSB=0.952035;RPB=0.123083;SGB=75.8731;VDB=0.025126;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.5:19468513 chr05:019468513 0 W/19468513-19468513 FN448-S Single Base Substitution A-G INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN465-S.SNP.5:19468723 chr05:019468723 0 W/19468723-19468723 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. W554-1-1.SNP.5:19471384 chr05:019471384 0 W/19471384-19471384 W554-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1634-S.SNP.5:19472537 chr05:019472537 0 W/19472537-19472537 FN1634-S Single Base Substitution G-C INTRON Homo SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1212-S.SNP.5:19473398 chr05:019473398 0 W/19473398-19473398 FN1212-S Single Base Substitution T-G INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1284-S.SNP.5:19474813 chr05:019474813 0 W/19474813-19474813 FN1284-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3295-S.SNP.5:19474813 chr05:019474813 0 W/19474813-19474813 FN3295-S SNP G -> A AC=1;AN=184;BQB=0.485671;DP=3142;DP4=1329,1619,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.70242e-12;MQSB=0.881787;RPB=0.880794;SGB=14.4113;VDB=0.988519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.5:19474813 chr05:019474813 0 W/19474813-19474813 FN3956-S SNP G -> A AC=2;AN=168;BQB=0.873544;DP=3066;DP4=1342,1503,11,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.66573e-19;MQSB=0.916187;RPB=0.923048;SGB=34.2378;VDB=0.983614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.5:19474951 chr05:019474951 0 W/19474951-19474951 FN2180-S SNP G -> A AC=2;AN=190;BQB=0.576309;DP=4950;DP4=2556,2052,33,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.92474e-32;MQSB=0.807999;RPB=0.929705;SGB=74.0356;VDB=0.958896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.5:19481415 chr05:019481415 0 W/19481415-19481415 FN2216-S SNP T -> A AC=1;AN=190;BQB=0.329825;DP=3884;DP4=1535,1664,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00263268;MQSB=0.0543734;RPB=0.815467;SGB=10.8904;VDB=0.775568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V76D|169|LOC_Os05g33220|protein_coding|CODING|LOC_Os05g33220.1|2|1) FN2149-S.SNP.5:19484392 chr05:019484392 0 W/19484392-19484392 FN2149-S SNP C -> A AC=2;AN=168;BQB=7.91636e-11;DP=2497;DP4=1034,669,20,30;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=0.000104854;MQSB=3.51238e-13;RPB=0.746529;SGB=-385.842;VDB=0.13648;EFF=INTRON(MODIFIER||||388|LOC_Os05g33230|protein_coding|CODING|LOC_Os05g33230.1|2|1) FN_552-1-1.SNP.5:19484392 chr05:019484392 0 W/19484392-19484392 FN_552-1-1 Single Base Substitution C-A Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3659-S.SNP.5:19487017 chr05:019487017 0 W/19487017-19487017 FN3659-S SNP A -> T AC=1;AN=190;BQB=0.970712;DP=3052;DP4=1380,1555,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17524e-05;MQSB=0.979657;RPB=0.99406;SGB=25.439;VDB=0.698224;EFF=INTRON(MODIFIER||||388|LOC_Os05g33230|protein_coding|CODING|LOC_Os05g33230.1|6|1) FN-81.SNP.5:19498140 chr05:019498140 0 W/19498140-19498140 FN-81 Single Base Substitution G-T INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN2088-S.SNP.5:19500511 chr05:019500511 0 W/19500511-19500511 FN2088-S SNP G -> A AC=1;AN=168;BQB=0.42107;DP=2440;DP4=1752,667,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18948e-05;MQSB=0.995798;RPB=0.352763;SGB=24.4556;VDB=0.450065;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.5:19501232 chr05:019501232 0 W/19501232-19501232 FN_546-3-1 Single Base Substitution G-A HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN3949-S.SNP.5:19504670 chr05:019504670 0 W/19504670-19504670 FN3949-S SNP A -> G AC=2;AN=168;BQB=0.923958;DP=2568;DP4=1300,1034,20,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.31065e-17;MQSB=0.926538;RPB=0.819487;SGB=-7.61782;VDB=0.43148;EFF=INTRON(MODIFIER||||388|LOC_Os05g33270|protein_coding|CODING|LOC_Os05g33270.1|1|1) FN601-S.SNP.5:19510026 chr05:019510026 0 W/19510026-19510026 FN601-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN548-S.SNP.5:19521221 chr05:019521221 0 W/19521221-19521221 FN548-S Single Base Substitution G-C INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-278.SNP.5:19521954 chr05:019521954 0 W/19521954-19521954 FN-278 Single Base Substitution T-G INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN347-S.SNP.5:19527194 chr05:019527194 0 W/19527194-19527194 FN347-S Single Base Substitution A-T STOP_GAINED HET LOC_Os05g33310 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3467-S.SNP.5:19533421 chr05:019533421 0 W/19533421-19533421 FN3467-S SNP A -> G AC=1;AN=184;BQB=0.956019;DP=3497;DP4=1875,1342,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.91693e-07;MQSB=0.676441;RPB=0.78705;SGB=44.2207;VDB=0.00212196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.5:19556011 chr05:019556011 0 W/19556011-19556011 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.798293;DP=4253;DP4=1896,2103,10,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235128;MQB=2.56037e-17;MQSB=0.889087;RPB=0.674612;SGB=60.747;VDB=0.675052;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R2383W|2756|LOC_Os05g33340|protein_coding|CODING|LOC_Os05g33340.1|13|1) FN-291.SNP.5:19559522 chr05:019559522 0 W/19559522-19559522 FN-291 Single Base Substitution A-G INTRON HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2591-S.SNP.5:19562468 chr05:019562468 0 W/19562468-19562468 FN2591-S SNP G -> A AC=1;AN=198;BQB=0.977877;DP=4079;DP4=1963,1830,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.00858053;MQB=0.0269252;MQSB=6.34972e-14;RPB=0.78845;SGB=-14.4309;VDB=0.0351715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1173S|2756|LOC_Os05g33340|protein_coding|CODING|LOC_Os05g33340.1|9|1) FN-179.SNP.5:19564792 chr05:019564792 0 W/19564792-19564792 FN-179 Single Base Substitution C-T INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN4143-S.SNP.5:19575569 chr05:019575569 0 W/19575569-19575569 FN4143-S SNP T -> G AC=1;AN=170;BQB=0.999823;DP=2310;DP4=1134,1092,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.0030303;MQB=2.08355e-08;MQSB=0.775542;RPB=0.769067;SGB=61.2001;VDB=0.993634;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:19577986 chr05:019577986 0 W/19577986-19577986 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.741184;DP=4528;DP4=1843,2444,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.69783e-12;MQSB=0.815633;RPB=0.502373;SGB=91.1059;VDB=0.446338;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.5:19578593 chr05:019578593 0 W/19578593-19578593 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.928289;DP=2202;DP4=1019,1122,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.4299e-07;MQSB=0.928954;RPB=0.966453;SGB=27.9928;VDB=0.579002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.5:19578950 chr05:019578950 0 W/19578950-19578950 FN1526-S Single Base Substitution A-G INTERGENIC Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN-392.SNP.5:19580807 chr05:019580807 0 W/19580807-19580807 FN-392 Single Base Substitution A-T INTERGENIC HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN3889-S.SNP.5:19583032 chr05:019583032 0 W/19583032-19583032 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.991446;DP=1916;DP4=874,971,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.7494e-05;MQSB=0.842444;RPB=0.979821;SGB=33.9591;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.5:19583058 chr05:019583058 0 W/19583058-19583058 FN3831-S SNP C -> G AC=1;AN=190;BQB=0.823299;DP=2140;DP4=833,1223,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44361e-08;MQSB=0.95584;RPB=0.994646;SGB=53.6492;VDB=0.07625;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.5:19584214 chr05:019584214 0 W/19584214-19584214 FN1465-S Single Base Substitution C-T INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN671-S.SNP.5:19586440 chr05:019586440 0 W/19586440-19586440 FN671-S Single Base Substitution T-G INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-150.SNP.5:19588143 chr05:019588143 0 W/19588143-19588143 FN-150 Single Base Substitution C-T INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN-283.SNP.5:19589215 chr05:019589215 0 W/19589215-19589215 FN-283 Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1345-S.SNP.5:19590963 chr05:019590963 0 W/19590963-19590963 FN1345-S Single Base Substitution G-C INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1423-S.SNP.5:19591401 chr05:019591401 0 W/19591401-19591401 FN1423-S Single Base Substitution G-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2689-S.SNP.5:19604004 chr05:019604004 0 W/19604004-19604004 FN2689-S SNP C -> A AC=1;AN=200;BQB=0.841282;DP=6298;DP4=3278,2674,6,7;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.426643;MQB=0.00109539;MQSB=3.67583e-10;RPB=0.298051;SGB=54.2646;VDB=0.769224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A516S|1478|LOC_Os05g33370|protein_coding|CODING|LOC_Os05g33370.1|3|1) FN2708-S.SNP.5:19604125 chr05:019604125 0 W/19604125-19604125 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.0116245;DP=6154;DP4=2481,3160,15,7;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.381378;MQB=0.0255099;MQSB=1.85533e-35;RPB=0.855123;SGB=-63.8899;VDB=0.144949;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G475|1478|LOC_Os05g33370|protein_coding|CODING|LOC_Os05g33370.1|3|1) FN1749-S.SNP.5:19614243 chr05:019614243 0 W/19614243-19614243 FN1749-S SNP T -> A AC=1;AN=188;BQB=0.849128;DP=3993;DP4=1822,2127,12,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16583e-13;MQSB=0.959215;RPB=0.900419;SGB=-42.845;VDB=0.756622;EFF=INTRON(MODIFIER||||1203|LOC_Os05g33390|protein_coding|CODING|LOC_Os05g33390.1|14|1) FN2549-S.SNP.5:19614520 chr05:019614520 0 W/19614520-19614520 FN2549-S SNP C -> G AC=1;AN=198;BQB=0.795063;DP=3946;DP4=1818,1959,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000253421;MQB=1.00826e-06;MQSB=0.95335;RPB=0.617145;SGB=40.3588;VDB=0.857441;EFF=INTRON(MODIFIER||||1203|LOC_Os05g33390|protein_coding|CODING|LOC_Os05g33390.1|14|1) FN1446-S.SNP.5:19628573 chr05:019628573 0 W/19628573-19628573 FN1446-S Single Base Substitution C-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN792-S.SNP.5:19631972 chr05:019631972 0 W/19631972-19631972 FN792-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN3424-S.SNP.5:19640709 chr05:019640709 0 W/19640709-19640709 FN3424-S SNP A -> G AC=2;AN=184;BQB=0.663516;DP=2657;DP4=1206,1348,16,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.45715e-22;MQSB=0.939948;RPB=0.88853;SGB=134.358;VDB=0.219901;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.5:19643488 chr05:019643488 0 W/19643488-19643488 FN2444 SNP T -> C AC=2;AN=200;BQB=0.549181;DP=4742;DP4=2257,2176,33,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.24588e-37;MQSB=0.99887;RPB=0.735426;SGB=80.1174;VDB=0.461965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.5:19648030 chr05:019648030 0 W/19648030-19648030 FN2128-S SNP T -> C AC=2;AN=168;BQB=0.143442;DP=3844;DP4=1822,1974,23,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.17409e-17;MQSB=0.993581;RPB=0.825697;SGB=-5.89455;VDB=0.67774;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.5:19648367 chr05:019648367 0 W/19648367-19648367 FN2790-S SNP C -> G AC=1;AN=198;BQB=0.978114;DP=4156;DP4=1899,2006,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.79176e-06;MQSB=0.517609;RPB=0.53453;SGB=40.3588;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.5:19653417 chr05:019653417 0 W/19653417-19653417 FN474-S Single Base Substitution T-C INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN-158.SNP.5:19655286 chr05:019655286 0 W/19655286-19655286 FN-158 Single Base Substitution G-A INTERGENIC HOMO SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1325-S.SNP.5:19657825 chr05:019657825 0 W/19657825-19657825 FN1325-S Single Base Substitution A-G INTRON HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2584-S.SNP.5:19673031 chr05:019673031 0 W/19673031-19673031 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.833359;DP=4123;DP4=1913,1917,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.26079e-11;MQSB=0.90845;RPB=0.999324;SGB=52.7004;VDB=0.793322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1360T|1978|LOC_Os05g33490|protein_coding|CODING|LOC_Os05g33490.1|3|1) FN1202-S.SNP.5:19675339 chr05:019675339 0 W/19675339-19675339 FN1202-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g33490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN948-S.SNP.5:19677775 chr05:019677775 0 W/19677775-19677775 FN948-S Single Base Substitution C-T INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2239-S.SNP.5:19687507 chr05:019687507 0 W/19687507-19687507 FN2239-S SNP T -> G AC=1;AN=190;BQB=0.471696;DP=5052;DP4=2572,2223,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.64845e-12;MQSB=0.939851;RPB=0.840355;SGB=57.4238;VDB=0.135442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.5:19690634 chr05:019690634 0 W/19690634-19690634 FN2239-S SNP T -> A AC=1;AN=190;BQB=0.935679;DP=5028;DP4=2336,2107,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0013922;MQB=6.37651e-09;MQSB=0.31475;RPB=0.0257611;SGB=11.8805;VDB=0.650176;EFF=INTERGENIC(MODIFIER||||||||||1) FN1742-S.SNP.5:19696309 chr05:019696309 0 W/19696309-19696309 FN1742-S SNP A -> C AC=2;AN=188;BQB=0.0485617;DP=3186;DP4=1710,1427,26,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.49312e-14;MQSB=0.944104;RPB=0.803565;SGB=-91.0366;VDB=0.0821391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.5:19698050 chr05:019698050 0 W/19698050-19698050 FN3630-S SNP T -> C AC=2;AN=190;BQB=0.775165;DP=2217;DP4=892,1072,9,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.7115e-07;MQSB=0.870828;RPB=0.739204;SGB=8.77275;VDB=0.333779;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F84|139|LOC_Os05g33530|protein_coding|CODING|LOC_Os05g33530.1|1|1) FN2387.SNP.5:19703803 chr05:019703803 0 W/19703803-19703803 FN2387 SNP T -> C AC=1;AN=192;BQB=0.96071;DP=5200;DP4=2516,2340,19,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.70393e-19;MQSB=0.992563;RPB=0.412643;SGB=107.503;VDB=0.565377;EFF=INTRON(MODIFIER||||185|LOC_Os05g33550|protein_coding|CODING|LOC_Os05g33550.1|1|1) FN491-S.SNP.5:19710945 chr05:019710945 0 W/19710945-19710945 FN491-S Single Base Substitution A-G INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2251-S.SNP.5:19713958 chr05:019713958 0 W/19713958-19713958 FN2251-S SNP C -> A AC=2;AN=190;BQB=0.974997;DP=3851;DP4=2348,1153,16,5;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.01584;MQB=0.998423;MQSB=0;RPB=0.98808;SGB=64.5316;VDB=0.033535;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.5:19716798 chr05:019716798 0 W/19716798-19716798 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.997195;DP=2218;DP4=985,1126,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46871e-07;MQSB=0.984344;RPB=0.986837;SGB=19.8839;VDB=0.440098;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.5:19724805 chr05:019724805 0 W/19724805-19724805 FN464-S Single Base Substitution A-G INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN702-S.SNP.5:19730264 chr05:019730264 0 W/19730264-19730264 FN702-S Single Base Substitution C-T INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3432-S.SNP.5:19732039 chr05:019732039 0 W/19732039-19732039 FN3432-S SNP T -> A AC=1;AN=184;BQB=0.815899;DP=2417;DP4=1138,1172,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.02284e-06;MQSB=0.934871;RPB=0.982722;SGB=44.2207;VDB=0.640463;EFF=INTRON(MODIFIER||||947|LOC_Os05g33570|protein_coding|CODING|LOC_Os05g33570.1|2|1) FN2332.SNP.5:19733781 chr05:019733781 0 W/19733781-19733781 FN2332 SNP C -> T AC=1;AN=192;BQB=0.383775;DP=5005;DP4=2505,2211,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.70062e-09;MQSB=0.994984;RPB=0.988661;SGB=39.78;VDB=0.299992;EFF=INTRON(MODIFIER||||947|LOC_Os05g33570|protein_coding|CODING|LOC_Os05g33570.1|2|1) FN3849-S.SNP.5:19741033 chr05:019741033 0 W/19741033-19741033 FN3849-S SNP T -> A AC=2;AN=158;BQB=0.920272;DP=3170;DP4=1427,1541,21,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.44272e-21;MQSB=0.990432;RPB=0.326194;SGB=28.1057;VDB=0.0412796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.5:19741034 chr05:019741034 0 W/19741034-19741034 FN3849-S SNP T -> C AC=2;AN=158;BQB=0.806869;DP=3170;DP4=1412,1573,20,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.94146e-20;MQSB=0.996216;RPB=0.551531;SGB=134.456;VDB=0.12314;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.5:19741156 chr05:019741156 0 W/19741156-19741156 FN-168 Single Base Substitution T-C INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN3899-S.SNP.5:19751888 chr05:019751888 0 W/19751888-19751888 FN3899-S SNP T -> C AC=2;AN=158;BQB=0.713316;DP=2385;DP4=977,1282,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.50071e-13;MQSB=0.990049;RPB=0.996565;SGB=99.5005;VDB=0.24773;EFF=INTERGENIC(MODIFIER||||||||||1) FN-69.SNP.5:19752515 chr05:019752515 0 W/19752515-19752515 FN-69 Single Base Substitution C-T INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN4093-S.SNP.5:19764182 chr05:019764182 0 W/19764182-19764182 FN4093-S SNP A -> T AC=1;AN=182;BQB=0.979696;DP=2828;DP4=1298,1423,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.35655e-08;MQSB=0.73966;RPB=0.639715;SGB=23.1441;VDB=0.132338;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.5:19764974 chr05:019764974 0 W/19764974-19764974 FN402-S Single Base Substitution G-A INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN1435-S.SNP.5:19780691 chr05:019780691 0 W/19780691-19780691 FN1435-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1435-S.SNP.5:19780692 chr05:019780692 0 W/19780692-19780692 FN1435-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g33630 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN-236.SNP.5:19782255 chr05:019782255 0 W/19782255-19782255 FN-236 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g33630 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1366-S.SNP.5:19784657 chr05:019784657 0 W/19784657-19784657 FN1366-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN490-S.SNP.5:19786993 chr05:019786993 0 W/19786993-19786993 FN490-S Single Base Substitution A-G INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN3668-S.SNP.5:19788477 chr05:019788477 0 W/19788477-19788477 FN3668-S SNP C -> A AC=1;AN=190;BQB=0.620269;DP=3559;DP4=1716,1664,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.59333e-09;MQSB=0.912207;RPB=0.877839;SGB=33.8752;VDB=0.0031852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.5:19790492 chr05:019790492 0 W/19790492-19790492 FN2697-S SNP C -> A AC=2;AN=200;BQB=0.0800813;DP=4740;DP4=2427,2004,19,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.37552e-26;MQSB=0.986105;RPB=0.347811;SGB=170.056;VDB=0.574985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.5:19793092 chr05:019793092 0 W/19793092-19793092 FN2485 SNP T -> C AC=2;AN=200;BQB=0.846126;DP=4909;DP4=2237,2341,21,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.64428e-24;MQSB=0.773814;RPB=0.853148;SGB=201.63;VDB=0.252188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.5:19798461 chr05:019798461 0 W/19798461-19798461 FN2327 SNP C -> T AC=1;AN=192;BQB=0.943119;DP=4941;DP4=2630,1958,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.49366e-12;MQSB=0.993194;RPB=0.636971;SGB=-10.8182;VDB=0.884432;EFF=INTRON(MODIFIER||||899|LOC_Os05g33644|protein_coding|CODING|LOC_Os05g33644.1|6|1) FN917-S.SNP.5:19801285 chr05:019801285 0 W/19801285-19801285 FN917-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1003-S.SNP.5:19808620 chr05:019808620 0 W/19808620-19808620 FN1003-S Single Base Substitution C-T INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN3630-S.SNP.5:19811077 chr05:019811077 0 W/19811077-19811077 FN3630-S SNP G -> T AC=2;AN=190;BQB=0.0992006;DP=2779;DP4=1416,1233,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26538e-05;MQSB=0.893126;RPB=0.473623;SGB=57.4238;VDB=0.333141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.5:19811970 chr05:019811970 0 W/19811970-19811970 FN2320 SNP T -> A AC=2;AN=192;BQB=0.844933;DP=4289;DP4=1441,1908,13,12;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.000233155;MQB=3.34347e-08;MQSB=1.01737e-05;RPB=0.786962;SGB=19.8696;VDB=0.892124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.5:19827671 chr05:019827671 0 W/19827671-19827671 FN2421 SNP A -> T AC=1;AN=200;BQB=0.314024;DP=4266;DP4=1952,1681,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.71039e-08;MQSB=0.92175;RPB=0.271656;SGB=-36.8949;VDB=0.557128;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.5:19835409 chr05:019835409 0 W/19835409-19835409 FN4077-S SNP G -> A AC=1;AN=182;BQB=0.973169;DP=2693;DP4=1398,1208,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.05575e-07;MQSB=0.978607;RPB=0.987834;SGB=25.0952;VDB=0.902899;EFF=INTRON(MODIFIER||||299|LOC_Os05g33700|protein_coding|CODING|LOC_Os05g33700.1|2|1) FN2578-S.SNP.5:19836251 chr05:019836251 0 W/19836251-19836251 FN2578-S SNP A -> T AC=2;AN=198;BQB=0.249697;DP=2635;DP4=1271,952,10,11;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00113852;MQB=5.69262e-05;MQSB=0.978336;RPB=0.94871;SGB=-37.0454;VDB=0.811675;EFF=INTRON(MODIFIER||||299|LOC_Os05g33700|protein_coding|CODING|LOC_Os05g33700.1|3|1) FN3823-S.SNP.5:19837476 chr05:019837476 0 W/19837476-19837476 FN3823-S SNP T -> A AC=1;AN=190;BQB=0.758268;DP=3054;DP4=1524,1240,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47285e-10;MQSB=0.966328;RPB=0.978422;SGB=31.3213;VDB=0.614059;EFF=INTRON(MODIFIER||||299|LOC_Os05g33700|protein_coding|CODING|LOC_Os05g33700.1|3|1) FN893-S.SNP.5:19842763 chr05:019842763 0 W/19842763-19842763 FN893-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g33710 WD domain, G-beta repeat domain containing protein, expressed SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN894-S.SNP.5:19847643 chr05:019847643 0 W/19847643-19847643 FN894-S Single Base Substitution G-T INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. W502-3-4.SNP.5:19847970 chr05:019847970 0 W/19847970-19847970 W502-3-4 Single Base Substitution C-T INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1261-S.SNP.5:19849209 chr05:019849209 0 W/19849209-19849209 FN1261-S Single Base Substitution T-C INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-363.SNP.5:19850567 chr05:019850567 0 W/19850567-19850567 FN-363 Single Base Substitution G-A INTERGENIC HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-363.SNP.5:19850576 chr05:019850576 0 W/19850576-19850576 FN-363 Single Base Substitution G-C INTERGENIC HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2650-S.SNP.5:19851594 chr05:019851594 0 W/19851594-19851594 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.999483;DP=4453;DP4=2333,1883,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.33598e-10;MQSB=0.937964;RPB=0.367257;SGB=61.9006;VDB=0.250781;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.5:19855530 chr05:019855530 0 W/19855530-19855530 FN896-S Single Base Substitution T-C INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN1255-S.SNP.5:19861246 chr05:019861246 0 W/19861246-19861246 FN1255-S Single Base Substitution T-C INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN4069-S.SNP.5:19871455 chr05:019871455 0 W/19871455-19871455 FN4069-S SNP T -> G AC=2;AN=182;BQB=0.417237;DP=3375;DP4=1527,1665,26,35;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.88463e-29;MQSB=0.97008;RPB=0.593371;SGB=229.155;VDB=0.086991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.5:19871504 chr05:019871504 0 W/19871504-19871504 FN2494 SNP C -> T AC=1;AN=200;BQB=0.729239;DP=5393;DP4=2488,2483,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.25656e-13;MQSB=0.950546;RPB=0.775078;SGB=-38.869;VDB=0.423794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.5:19874010 chr05:019874010 0 W/19874010-19874010 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.99712;DP=4013;DP4=1759,2062,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.72384e-13;MQSB=0.923841;RPB=0.995282;SGB=90.9049;VDB=0.533948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.5:19876312 chr05:019876312 0 W/19876312-19876312 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.819232;DP=4945;DP4=2421,2274,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72462e-10;MQSB=0.875626;RPB=0.953733;SGB=54.6902;VDB=0.332478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.5:19878929 chr05:019878929 0 W/19878929-19878929 FN1379-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN896-S.SNP.5:19879457 chr05:019879457 0 W/19879457-19879457 FN896-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN950-S.SNP.5:19879457 chr05:019879457 0 W/19879457-19879457 FN950-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. W426-1-1.SNP.5:19880913 chr05:019880913 0 W/19880913-19880913 W426-1-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g33750 retrotransposon protein, putative, unclassified, expressed SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN2688-S.SNP.5:19884166 chr05:019884166 0 W/19884166-19884166 FN2688-S SNP G -> A AC=2;AN=200;BQB=0.0142983;DP=4195;DP4=2082,1879,6,12;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00286055;MQB=0.0343191;MQSB=0.00249664;RPB=0.844271;SGB=54.6902;VDB=0.285863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.5:19884556 chr05:019884556 0 W/19884556-19884556 FN-105 Single Base Substitution C-T INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2283.SNP.5:19884892 chr05:019884892 0 W/19884892-19884892 FN2283 SNP G -> A AC=1;AN=192;BQB=0.305304;DP=4691;DP4=2508,1777,19,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000213174;MQB=6.49241e-17;MQSB=0.9899;RPB=0.991987;SGB=37.0774;VDB=0.988289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.5:19884892 chr05:019884892 0 W/19884892-19884892 FN3449-S SNP G -> A AC=2;AN=184;BQB=0.745789;DP=2627;DP4=1229,1286,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.67826e-14;MQSB=0.952401;RPB=0.0658387;SGB=98.4821;VDB=0.656099;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.5:19884892 chr05:019884892 0 W/19884892-19884892 FN692-S Single Base Substitution G-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2137-S.SNP.5:19885602 chr05:019885602 0 W/19885602-19885602 FN2137-S SNP C -> A AC=2;AN=168;BQB=0.461695;DP=1892;DP4=1452,391,22,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.03713e-11;MQSB=0.695645;RPB=0.505747;SGB=-75.914;VDB=0.306064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.5:19887232 chr05:019887232 0 W/19887232-19887232 FN2724-S SNP C -> T AC=2;AN=200;BQB=0.67388;DP=4548;DP4=2134,2157,18,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.23969e-21;MQSB=0.996435;RPB=0.462243;SGB=35.1726;VDB=0.274618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.5:19887233 chr05:019887233 0 W/19887233-19887233 FN2724-S SNP A -> T AC=2;AN=200;BQB=0.999938;DP=4547;DP4=2124,2202,18,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.87113e-21;MQSB=0.99575;RPB=0.23139;SGB=-42.8173;VDB=0.33466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.5:19890538 chr05:019890538 0 W/19890538-19890538 FN3297-S SNP G -> A AC=2;AN=184;BQB=0.999372;DP=3578;DP4=1263,2179,11,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.85506e-20;MQSB=0.946742;RPB=0.152549;SGB=116.749;VDB=0.0586512;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.5:19891682 chr05:019891682 0 W/19891682-19891682 FN911-S Single Base Substitution T-C INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN960-S.SNP.5:19901817 chr05:019901817 0 W/19901817-19901817 FN960-S Single Base Substitution C-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN2292.SNP.5:19901847 chr05:019901847 0 W/19901847-19901847 FN2292 SNP C -> T AC=1;AN=192;BQB=0.830906;DP=5225;DP4=2625,2173,12,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00172249;MQB=5.60089e-16;MQSB=0.347378;RPB=0.526394;SGB=-6.30345;VDB=0.102674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.5:19918387 chr05:019918387 0 W/19918387-19918387 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.678871;DP=5063;DP4=2729,2099,6,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0136283;MQB=3.54048e-05;MQSB=0.000279772;RPB=0.652198;SGB=40.4492;VDB=0.491368;EFF=INTRON(MODIFIER||||251|LOC_Os05g33800|protein_coding|CODING|LOC_Os05g33800.1|1|1) FN3599-S.SNP.5:19923217 chr05:019923217 0 W/19923217-19923217 FN3599-S SNP T -> A AC=1;AN=188;BQB=0.940589;DP=4229;DP4=2194,1753,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72288e-14;MQSB=0.8744;RPB=0.786478;SGB=22.5144;VDB=0.86144;EFF=UTR_5_PRIME(MODIFIER||184||842|LOC_Os05g33810|protein_coding|CODING|LOC_Os05g33810.1|1|1) FN409-S.SNP.5:19926657 chr05:019926657 0 W/19926657-19926657 FN409-S Single Base Substitution C-G INTRON HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN-60.SNP.5:19928579 chr05:019928579 0 W/19928579-19928579 FN-60 Single Base Substitution A-T INTRON HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN910-S.SNP.5:19933504 chr05:019933504 0 W/19933504-19933504 FN910-S Single Base Substitution A-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN1184-S.SNP.5:19938243 chr05:019938243 0 W/19938243-19938243 FN1184-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1730-S.SNP.5:19939095 chr05:019939095 0 W/19939095-19939095 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.981724;DP=3261;DP4=1891,1345,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.79631e-08;MQSB=0.999948;RPB=0.700611;SGB=-13.3699;VDB=0.455559;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.5:19941128 chr05:019941128 0 W/19941128-19941128 FN_788-1-1 Single Base Substitution A-T Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1426-S.SNP.5:19941260 chr05:019941260 0 W/19941260-19941260 FN1426-S Single Base Substitution G-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3967-S.SNP.5:19942336 chr05:019942336 0 W/19942336-19942336 FN3967-S SNP T -> C AC=1;AN=182;BQB=0.868596;DP=2841;DP4=1178,1584,8,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.17787e-11;MQSB=0.700612;RPB=0.841522;SGB=70.7363;VDB=0.746532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.5:19946934 chr05:019946934 0 W/19946934-19946934 FN2105-S SNP T -> C AC=2;AN=168;BQB=0.510469;DP=2681;DP4=1233,1380,18,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.22871e-10;MQSB=0.933875;RPB=0.0807215;SGB=-118.616;VDB=0.249413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.5:19956943 chr05:019956943 0 W/19956943-19956943 FN2392 SNP C -> T AC=1;AN=200;BQB=0.99558;DP=5056;DP4=1960,2863,5,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91191e-16;MQSB=0.984625;RPB=0.648314;SGB=123.342;VDB=0.824778;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.5:19963032 chr05:019963032 0 W/19963032-19963032 FN1075-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2138-S.SNP.5:19965013 chr05:019965013 0 W/19965013-19965013 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.543847;DP=3595;DP4=1384,2161,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66756e-15;MQSB=0.994738;RPB=0.639957;SGB=63.5086;VDB=0.433522;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.5:19966207 chr05:019966207 0 W/19966207-19966207 FN4174-S SNP A -> T AC=1;AN=170;BQB=0.968986;DP=2304;DP4=922,1297,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.8992e-08;MQSB=0.875648;RPB=0.552795;SGB=61.2001;VDB=0.729547;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.5:19974473 chr05:019974473 0 W/19974473-19974473 FN588-S Single Base Substitution T-G INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2638-S.SNP.5:19976960 chr05:019976960 0 W/19976960-19976960 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.996749;DP=4709;DP4=2310,2221,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.33297e-05;MQSB=0.945961;RPB=0.401081;SGB=22.2439;VDB=0.556176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.5:19977283 chr05:019977283 0 W/19977283-19977283 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.929072;DP=5125;DP4=2764,2164,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.14015e-17;MQSB=0.812398;RPB=0.140386;SGB=55.5366;VDB=0.591008;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.5:19980467 chr05:019980467 0 W/19980467-19980467 W252-6-1 Single Base Substitution A-G INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN1499-S.SNP.5:19981432 chr05:019981432 0 W/19981432-19981432 FN1499-S Single Base Substitution A-T INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2752-S.SNP.5:19981449 chr05:019981449 0 W/19981449-19981449 FN2752-S SNP A -> G AC=1;AN=200;BQB=0.984958;DP=4869;DP4=2317,2333,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82102e-12;MQSB=0.958022;RPB=0.993457;SGB=39.9056;VDB=0.322864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.5:19983339 chr05:019983339 0 W/19983339-19983339 FN2478 SNP T -> C AC=1;AN=200;BQB=0.754254;DP=4720;DP4=1901,2413,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78574e-12;MQSB=0.0660518;RPB=0.599949;SGB=52.9314;VDB=0.880901;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.5:19985030 chr05:019985030 0 W/19985030-19985030 FN-190 Single Base Substitution C-A INTRON HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2577-S.SNP.5:19987397 chr05:019987397 0 W/19987397-19987397 FN2577-S SNP C -> G AC=1;AN=198;BQB=0.982952;DP=4137;DP4=1994,1912,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43545e-08;MQSB=0.857574;RPB=0.996546;SGB=63.3342;VDB=0.186494;EFF=UTR_3_PRIME(MODIFIER||30||188|LOC_Os05g33880|protein_coding|CODING|LOC_Os05g33880.1|4|1),UTR_3_PRIME(MODIFIER||30||184|LOC_Os05g33880|protein_coding|CODING|LOC_Os05g33880.2|4|1) W42-1-3S-1.SNP.5:19989421 chr05:019989421 0 W/19989421-19989421 W42-1-3S-1 Single Base Substitution T-A INTRON HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN748-S.SNP.5:20002158 chr05:020002158 0 W/20002158-20002158 FN748-S Single Base Substitution T-G INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4201-S.SNP.5:20002434 chr05:020002434 0 W/20002434-20002434 FN4201-S SNP C -> T AC=1;AN=170;BQB=0.581657;DP=2384;DP4=1223,1086,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000113369;MQSB=0.922054;RPB=0.707049;SGB=31.4354;VDB=0.0725241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3974-S.SNP.5:20006305 chr05:020006305 0 W/20006305-20006305 FN3974-S SNP C -> T AC=1;AN=168;BQB=0.99403;DP=2579;DP4=1306,1115,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.08886e-10;MQSB=0.690842;RPB=0.880629;SGB=45.0404;VDB=0.37989;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.5:20015551 chr05:020015551 0 W/20015551-20015551 FN-85 Single Base Substitution A-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN4130-S.SNP.5:20018764 chr05:020018764 0 W/20018764-20018764 FN4130-S SNP C -> T AC=1;AN=182;BQB=0.972887;DP=2887;DP4=1352,1478,4,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.71616e-05;MQSB=0.997686;RPB=0.394675;SGB=26.0691;VDB=0.866441;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.5:20019172 chr05:020019172 0 W/20019172-20019172 FN3914-S SNP G -> T AC=2;AN=158;BQB=0.951276;DP=2442;DP4=1039,1277,12,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.36256e-16;MQSB=0.854915;RPB=0.356361;SGB=74.5068;VDB=0.0132733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.5:20019174 chr05:020019174 0 W/20019174-20019174 FN3914-S SNP C -> G AC=2;AN=158;BQB=0.990836;DP=2433;DP4=1032,1291,12,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.08475e-16;MQSB=0.796719;RPB=0.421174;SGB=74.5068;VDB=0.0191563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.5:20021065 chr05:020021065 0 W/20021065-20021065 FN3990-S SNP C -> T AC=1;AN=168;BQB=0.999348;DP=2611;DP4=1166,1327,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.30963e-11;MQSB=0.982549;RPB=0.661921;SGB=92.0501;VDB=0.18298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.5:20021245 chr05:020021245 0 W/20021245-20021245 FN3912-S SNP C -> T AC=1;AN=158;BQB=0.95624;DP=2360;DP4=1214,1068,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.53258e-05;MQSB=0.999303;RPB=0.886984;SGB=33.9591;VDB=0.367755;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.5:20022563 chr05:020022563 0 W/20022563-20022563 FN1512-S Single Base Substitution C-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1718-S.SNP.5:20023406 chr05:020023406 0 W/20023406-20023406 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.132027;DP=3359;DP4=1334,1987,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.43555e-05;MQSB=0.832621;RPB=0.809372;SGB=-107.522;VDB=0.201574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.5:20033570 chr05:020033570 0 W/20033570-20033570 FN3927-S SNP C -> T AC=1;AN=158;BQB=0.684437;DP=2150;DP4=1079,799,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.39682e-07;MQSB=0.997432;RPB=0.890257;SGB=51.4366;VDB=0.194222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.5:20034902 chr05:020034902 0 W/20034902-20034902 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.997137;DP=3870;DP4=1688,2078,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.43479e-10;MQSB=0.990697;RPB=0.470962;SGB=43.0708;VDB=0.531411;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.5:20039340 chr05:020039340 0 W/20039340-20039340 FN1471-S SNP A -> G AC=1;AN=188;BQB=0.00944326;DP=2697;DP4=1795,791,13,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.11159e-07;MQSB=0.780553;RPB=0.679421;SGB=-236.246;VDB=0.0569749;EFF=UTR_3_PRIME(MODIFIER||112||362|LOC_Os05g33940|protein_coding|CODING|LOC_Os05g33940.1|1|1) FN890-S.SNP.5:20039894 chr05:020039894 0 W/20039894-20039894 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2456.SNP.5:20063974 chr05:020063974 0 W/20063974-20063974 FN2456 SNP C -> T AC=1;AN=200;BQB=0.071204;DP=4787;DP4=2467,1987,5,4;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.024859;MQB=0.533543;MQSB=0.0513476;RPB=0.188589;SGB=35.8441;VDB=0.706142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P859S|1863|LOC_Os05g33980|protein_coding|CODING|LOC_Os05g33980.1|3|1) FN574-S.SNP.5:20065356 chr05:020065356 0 W/20065356-20065356 FN574-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2338.SNP.5:20067422 chr05:020067422 0 W/20067422-20067422 FN2338 SNP C -> T AC=2;AN=192;BQB=0.0761878;DP=5388;DP4=2110,2856,19,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.32321e-21;MQSB=0.647775;RPB=0.854629;SGB=6.11221;VDB=0.289209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.5:20069064 chr05:020069064 0 W/20069064-20069064 FN2531-S SNP G -> C AC=1;AN=198;BQB=0.778518;DP=3665;DP4=1872,1601,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.38314e-07;MQSB=0.755249;RPB=0.112977;SGB=44.9538;VDB=0.289677;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P584R|1009|LOC_Os05g33990|protein_coding|CODING|LOC_Os05g33990.1|1|1) FN4204-S.SNP.5:20076483 chr05:020076483 0 W/20076483-20076483 FN4204-S SNP T -> A AC=2;AN=170;BQB=0.965208;DP=2665;DP4=1282,1268,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.40087e-11;MQSB=0.956114;RPB=0.917307;SGB=92.2986;VDB=0.629359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.5:20080542 chr05:020080542 0 W/20080542-20080542 FN2410 SNP C -> T AC=2;AN=200;BQB=0.516832;DP=2927;DP4=1491,1155,20,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=6.4624e-15;MQSB=0.058074;RPB=0.618873;SGB=150.973;VDB=0.894613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.5:20092537 chr05:020092537 0 W/20092537-20092537 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2662-S.SNP.5:20094675 chr05:020094675 0 W/20094675-20094675 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.185277;DP=4962;DP4=2259,2441,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.83964e-22;MQSB=0.997687;RPB=0.864071;SGB=76.378;VDB=0.422445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.5:20094782 chr05:020094782 0 W/20094782-20094782 FN3860-S SNP A -> C AC=1;AN=158;BQB=0.958902;DP=2563;DP4=1350,1130,11,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.55629e-13;MQSB=0.920349;RPB=0.764307;SGB=67.7679;VDB=0.570858;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.5:20102967 chr05:020102967 0 W/20102967-20102967 FN-202 Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN1529-S.SNP.5:20117245 chr05:020117245 0 W/20117245-20117245 FN1529-S Single Base Substitution A-G INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3775-S.SNP.5:20121764 chr05:020121764 0 W/20121764-20121764 FN3775-S SNP C -> A AC=2;AN=190;BQB=0.76403;DP=2895;DP4=1208,1574,4,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.08947e-12;MQSB=0.934944;RPB=0.646694;SGB=60.9777;VDB=0.16353;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.5:20121765 chr05:020121765 0 W/20121765-20121765 FN3775-S SNP A -> T AC=2;AN=190;BQB=0.460051;DP=2891;DP4=1115,1571,9,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.80519e-14;MQSB=0.961568;RPB=0.580903;SGB=21.2038;VDB=0.44394;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.5:20121789 chr05:020121789 0 W/20121789-20121789 FN3775-S SNP G -> T AC=2;AN=190;BQB=0.380251;DP=2776;DP4=1132,1538,6,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.61613e-14;MQSB=0.999017;RPB=0.881812;SGB=68.0854;VDB=0.644095;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.5:20125290 chr05:020125290 0 W/20125290-20125290 FN1049-S Single Base Substitution G-A INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2706-S.SNP.5:20143979 chr05:020143979 0 W/20143979-20143979 FN2706-S SNP C -> G AC=1;AN=200;BQB=0.0374716;DP=4660;DP4=2280,2143,8,7;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0849785;MQB=0.777411;MQSB=0;RPB=0.778079;SGB=43.8747;VDB=0.39454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cCg|R62P|1984|LOC_Os05g34090|protein_coding|CODING|LOC_Os05g34090.1|1|1) FN1307-S.SNP.5:20148451 chr05:020148451 0 W/20148451-20148451 FN1307-S Single Base Substitution A-G INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2355.SNP.5:20149861 chr05:020149861 0 W/20149861-20149861 FN2355 SNP C -> G AC=1;AN=192;BQB=0.744242;DP=3751;DP4=1532,1986,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000266596;MQB=1.59481e-05;MQSB=1.27785e-05;RPB=0.487563;SGB=49.2105;VDB=0.484415;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R3|256|LOC_Os05g34100|protein_coding|CODING|LOC_Os05g34100.1|1|1) FN2141-S.SNP.5:20151735 chr05:020151735 0 W/20151735-20151735 FN2141-S SNP C -> G AC=1;AN=168;BQB=0.0872791;DP=3919;DP4=1914,1967,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.98636e-12;MQSB=0.955996;RPB=0.92865;SGB=24.2221;VDB=0.460946;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.5:20156906 chr05:020156906 0 W/20156906-20156906 FN-59 Single Base Substitution A-C INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2147-S.SNP.5:20168922 chr05:020168922 0 W/20168922-20168922 FN2147-S SNP T -> C AC=1;AN=168;BQB=0.766046;DP=2931;DP4=1668,1210,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.90959e-12;MQSB=0.99399;RPB=0.537937;SGB=58.7637;VDB=0.524809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.5:20173072 chr05:020173072 0 W/20173072-20173072 FN2426 SNP A -> C AC=2;AN=200;BQB=0.302006;DP=2466;DP4=1248,994,21,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.71994e-20;MQSB=0.577142;RPB=0.857515;SGB=128.263;VDB=0.0808291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.5:20175278 chr05:020175278 0 W/20175278-20175278 FN1662-S Single Base Substitution C-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN-339.SNP.5:20183329 chr05:020183329 0 W/20183329-20183329 FN-339 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN4044-S.SNP.5:20184009 chr05:020184009 0 W/20184009-20184009 FN4044-S SNP C -> T AC=1;AN=168;BQB=0.998065;DP=2797;DP4=1329,1356,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01694e-07;MQSB=0.997221;RPB=0.913917;SGB=31.3172;VDB=0.261515;EFF=INTRON(MODIFIER||||784|LOC_Os05g34140|protein_coding|CODING|LOC_Os05g34140.1|2|1) FN805-S.SNP.5:20188792 chr05:020188792 0 W/20188792-20188792 FN805-S Single Base Substitution G-A INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN3786-S.SNP.5:20191965 chr05:020191965 0 W/20191965-20191965 FN3786-S SNP G -> T AC=1;AN=190;BQB=0.924531;DP=3160;DP4=1448,1619,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74785e-08;MQSB=0.97569;RPB=0.684843;SGB=53.6492;VDB=0.435614;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.5:20195333 chr05:020195333 0 W/20195333-20195333 FN452-S Single Base Substitution T-C INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN1254-S.SNP.5:20196109 chr05:020196109 0 W/20196109-20196109 FN1254-S Single Base Substitution G-A INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3573-S.SNP.5:20196689 chr05:020196689 0 W/20196689-20196689 FN3573-S SNP C -> T AC=1;AN=188;BQB=0.941247;DP=3745;DP4=1682,1984,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.70427e-08;MQSB=0.807136;RPB=0.941604;SGB=32.441;VDB=0.857507;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.5:20201438 chr05:020201438 0 W/20201438-20201438 FN4138-S SNP T -> G AC=1;AN=170;BQB=0.983734;DP=2509;DP4=1210,1226,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.50846e-07;MQSB=0.966563;RPB=0.963283;SGB=34.878;VDB=0.131193;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.5:20202865 chr05:020202865 0 W/20202865-20202865 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.946488;DP=4234;DP4=1873,1847,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.2645e-10;MQSB=0.987545;RPB=0.746744;SGB=-13.7154;VDB=0.317573;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.5:20209434 chr05:020209434 0 W/20209434-20209434 FN792-S Single Base Substitution A-G INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN1493-S.SNP.5:20209443 chr05:020209443 0 W/20209443-20209443 FN1493-S Single Base Substitution C-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN729-S.SNP.5:20210012 chr05:020210012 0 W/20210012-20210012 FN729-S Single Base Substitution C-T INTERGENIC HOMO SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN3834-S.SNP.5:20214031 chr05:020214031 0 W/20214031-20214031 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.661405;DP=3438;DP4=1569,1737,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.49414e-07;MQSB=0.0504874;RPB=0.395303;SGB=43.2083;VDB=0.282437;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.5:20214090 chr05:020214090 0 W/20214090-20214090 FN1734-S SNP G -> A AC=1;AN=188;BQB=0.397057;DP=2793;DP4=1207,1565,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0870032;MQB=0.917796;MQSB=6.98497e-18;RPB=0.758443;SGB=2.45162;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.5:20228144 chr05:020228144 0 W/20228144-20228144 FN580-S Single Base Substitution T-A INTRON HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-278.SNP.5:20228414 chr05:020228414 0 W/20228414-20228414 FN-278 Single Base Substitution T-A INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3919-S.SNP.5:20250465 chr05:020250465 0 W/20250465-20250465 FN3919-S SNP C -> G AC=1;AN=158;BQB=0.970419;DP=2494;DP4=1194,1198,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.55337e-11;MQSB=0.99544;RPB=0.858669;SGB=64.3985;VDB=0.100776;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.5:20259236 chr05:020259236 0 W/20259236-20259236 FN751-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN1285-S.SNP.5:20278696 chr05:020278696 0 W/20278696-20278696 FN1285-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g34260 transposon protein, putative, Ac/Ds sub-class, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1285-S.SNP.5:20278697 chr05:020278697 0 W/20278697-20278697 FN1285-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g34260 transposon protein, putative, Ac/Ds sub-class, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1355-S.SNP.5:20287235 chr05:020287235 0 W/20287235-20287235 FN1355-S Single Base Substitution G-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2335.SNP.5:20290038 chr05:020290038 0 W/20290038-20290038 FN2335 SNP T -> C AC=1;AN=192;BQB=0.449646;DP=4770;DP4=1895,2571,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.66108e-16;MQSB=0.999425;RPB=0.376325;SGB=-6.8678;VDB=0.14314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.5:20297767 chr05:020297767 0 W/20297767-20297767 FN3740-S SNP T -> A AC=1;AN=190;BQB=0.91645;DP=2663;DP4=1018,1494,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07157e-06;MQSB=0.961927;RPB=0.769167;SGB=39.9877;VDB=0.0276139;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.5:20309522 chr05:020309522 0 W/20309522-20309522 FN795-S Single Base Substitution A-C INTRON HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN3432-S.SNP.5:20321868 chr05:020321868 0 W/20321868-20321868 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.681592;DP=2919;DP4=1205,1622,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.37014e-05;MQSB=0.892576;RPB=0.998182;SGB=25.1826;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.5:20324062 chr05:020324062 0 W/20324062-20324062 FN484-S Single Base Substitution G-A INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3370-S.SNP.5:20330987 chr05:020330987 0 W/20330987-20330987 FN3370-S SNP A -> G AC=2;AN=184;BQB=0.923129;DP=2951;DP4=1320,1499,15,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.55182e-20;MQSB=0.961473;RPB=0.918355;SGB=106.184;VDB=0.341821;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.5:20332219 chr05:020332219 0 W/20332219-20332219 FN521-S Single Base Substitution A-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN833-S.SNP.5:20332664 chr05:020332664 0 W/20332664-20332664 FN833-S Single Base Substitution C-A INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN833-S.SNP.5:20332665 chr05:020332665 0 W/20332665-20332665 FN833-S Single Base Substitution C-A INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3434-S.SNP.5:20350567 chr05:020350567 0 W/20350567-20350567 FN3434-S SNP C -> A AC=1;AN=184;BQB=0.999302;DP=3623;DP4=1755,1730,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.00165609;MQB=0.0204002;MQSB=0;RPB=0.60602;SGB=57.786;VDB=0.450857;EFF=INTRON(MODIFIER||||1750|LOC_Os05g34330|protein_coding|CODING|LOC_Os05g34330.1|10|1) FN1512-S.SNP.5:20352628 chr05:020352628 0 W/20352628-20352628 FN1512-S Single Base Substitution C-G INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1285-S.SNP.5:20366210 chr05:020366210 0 W/20366210-20366210 FN1285-S Single Base Substitution C-T INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN4208-S.SNP.5:20366792 chr05:020366792 0 W/20366792-20366792 FN4208-S SNP C -> T AC=1;AN=170;BQB=0.995245;DP=2482;DP4=1434,987,10,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.49271e-08;MQSB=0.987684;RPB=0.996958;SGB=31.4354;VDB=0.112883;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P418|572|LOC_Os05g34370|protein_coding|CODING|LOC_Os05g34370.1|5|1) FN2492.SNP.5:20367278 chr05:020367278 0 W/20367278-20367278 FN2492 SNP C -> T AC=2;AN=200;BQB=0.0211972;DP=4829;DP4=2123,2323,14,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.61834e-17;MQSB=0.883124;RPB=0.94289;SGB=115.978;VDB=0.695789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A299T|572|LOC_Os05g34370|protein_coding|CODING|LOC_Os05g34370.1|3|1) FN962-S.SNP.5:20369121 chr05:020369121 0 W/20369121-20369121 FN962-S Single Base Substitution T-C INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN-112.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN-112 Single Base Substitution T-A INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN-315.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN-315 Single Base Substitution T-A INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN-387 Single Base Substitution T-A INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1042-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN1042-S Single Base Substitution T-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1089-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN1089-S Single Base Substitution T-A INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1300-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN1300-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1369-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN1369-S Single Base Substitution T-A INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2120-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN2120-S SNP T -> A AC=2;AN=168;BQB=0.0863053;DP=2709;DP4=914,1748,13,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.48182e-08;MQSB=0.911398;RPB=0.925045;SGB=-168.619;VDB=0.395052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN2456 SNP T -> A AC=1;AN=200;BQB=0.872842;DP=4314;DP4=1813,2251,3,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00069541;MQB=0.00142205;MQSB=1.22697e-05;RPB=0.805797;SGB=18.639;VDB=0.892692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN2658-S SNP T -> A AC=1;AN=200;BQB=0.782798;DP=4448;DP4=1910,2346,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00022482;MQB=2.14579e-10;MQSB=0.0160972;RPB=0.6693;SGB=77.2904;VDB=0.341627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN3376-S SNP T -> A AC=1;AN=184;BQB=0.927168;DP=2980;DP4=1341,1484,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00033557;MQB=1.15341e-11;MQSB=0.792923;RPB=0.551412;SGB=63.9222;VDB=0.395214;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN3445-S SNP T -> A AC=2;AN=184;BQB=0.796052;DP=2664;DP4=1161,1365,8,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.94918e-09;MQSB=0.91233;RPB=0.839645;SGB=23.2751;VDB=0.202936;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN347-S Single Base Substitution T-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3599-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN3599-S SNP T -> A AC=2;AN=188;BQB=0.84753;DP=2740;DP4=1253,1365,12,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.16424e-14;MQSB=0.99069;RPB=0.534428;SGB=51.5091;VDB=0.563269;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN3766-S SNP T -> A AC=2;AN=190;BQB=0.999937;DP=2557;DP4=1116,1303,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.21118e-12;MQSB=0.777395;RPB=0.506301;SGB=13.4344;VDB=0.419105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN3897-S SNP T -> A AC=2;AN=158;BQB=0.977799;DP=2265;DP4=954,1197,15,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.25849e-13;MQSB=0.706746;RPB=0.763209;SGB=134.456;VDB=0.141331;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN4024-S SNP T -> A AC=2;AN=168;BQB=0.963804;DP=2541;DP4=1052,1361,1,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.8779e-05;MQSB=0.701;RPB=0.393214;SGB=38.8805;VDB=0.196964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN4176-S SNP T -> A AC=2;AN=170;BQB=0.811986;DP=2358;DP4=957,1295,15,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.32949e-12;MQSB=0.448518;RPB=0.99962;SGB=39.4251;VDB=0.658104;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN474-S Single Base Substitution T-A INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN696-S Single Base Substitution T-A INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN768-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN768-S Single Base Substitution T-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN949-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN949-S Single Base Substitution T-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN975-S Single Base Substitution T-A INTERGENIC HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.5:20369899 chr05:020369899 0 W/20369899-20369899 FN_935-1 Single Base Substitution T-A HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN1740-S.SNP.5:20374247 chr05:020374247 0 W/20374247-20374247 FN1740-S SNP C -> A AC=2;AN=188;BQB=0.999995;DP=2697;DP4=1350,1291,12,12;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00519095;MQB=0.0822324;MQSB=4.6501e-05;RPB=0.812743;SGB=17.8846;VDB=0.776626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.5:20377851 chr05:020377851 0 W/20377851-20377851 FN3781-S SNP C -> T AC=1;AN=190;BQB=0.46475;DP=2521;DP4=1141,1266,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98306e-08;MQSB=0.999958;RPB=0.607325;SGB=43.2083;VDB=0.784707;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.5:20378103 chr05:020378103 0 W/20378103-20378103 FN846-S Single Base Substitution A-C INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN673-S.SNP.5:20387783 chr05:020387783 0 W/20387783-20387783 FN673-S Single Base Substitution T-C INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN673-S.SNP.5:20387786 chr05:020387786 0 W/20387786-20387786 FN673-S Single Base Substitution G-T INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN673-S.SNP.5:20387787 chr05:020387787 0 W/20387787-20387787 FN673-S Single Base Substitution T-A INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN2258-S.SNP.5:20395595 chr05:020395595 0 W/20395595-20395595 FN2258-S SNP G -> A AC=1;AN=190;BQB=0.0471597;DP=4329;DP4=1724,1963,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000231;MQB=1.96807e-08;MQSB=0.964708;RPB=0.53878;SGB=-14.3297;VDB=0.937465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.5:20398899 chr05:020398899 0 W/20398899-20398899 FN2690-S SNP C -> G AC=2;AN=200;BQB=0.529057;DP=4262;DP4=1983,2059,18,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.27925e-18;MQSB=0.706394;RPB=0.93656;SGB=141.763;VDB=0.294209;EFF=INTRON(MODIFIER||||649|LOC_Os05g34420|protein_coding|CODING|LOC_Os05g34420.1|1|1) FN1470-S.SNP.5:20400484 chr05:020400484 0 W/20400484-20400484 FN1470-S Single Base Substitution T-C INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN444-S.SNP.5:20401049 chr05:020401049 0 W/20401049-20401049 FN444-S Single Base Substitution A-G INTERGENIC HOMO SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2282.SNP.5:20407386 chr05:020407386 0 W/20407386-20407386 FN2282 SNP G -> A AC=1;AN=192;BQB=0.363993;DP=4640;DP4=1954,2440,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215517;MQB=9.30374e-08;MQSB=0.897675;RPB=0.928594;SGB=2.66176;VDB=0.849606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.5:20422112 chr05:020422112 0 W/20422112-20422112 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2408.SNP.5:20422917 chr05:020422917 0 W/20422917-20422917 FN2408 SNP G -> A AC=1;AN=200;BQB=0.939705;DP=4897;DP4=2143,2514,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.39777e-05;MQSB=0.992222;RPB=0.181411;SGB=13.8539;VDB=0.461238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.5:20439552 chr05:020439552 0 W/20439552-20439552 FN2690-S SNP A -> C AC=2;AN=200;BQB=0.212419;DP=4859;DP4=2355,2252,20,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.65818e-29;MQSB=0.998518;RPB=0.741888;SGB=54.4347;VDB=0.802748;EFF=INTRON(MODIFIER||||329|LOC_Os05g34470|protein_coding|CODING|LOC_Os05g34470.1|2|1),INTRON(MODIFIER||||297|LOC_Os05g34470|protein_coding|CODING|LOC_Os05g34470.2|2|1) FN-120.SNP.5:20448423 chr05:020448423 0 W/20448423-20448423 FN-120 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-14.SNP.5:20451218 chr05:020451218 0 W/20451218-20451218 FN-14 Single Base Substitution G-A INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2183-S.SNP.5:20451664 chr05:020451664 0 W/20451664-20451664 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.368917;DP=5267;DP4=2535,2387,16,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.64748e-18;MQSB=0.902988;RPB=0.274916;SGB=-46.5853;VDB=0.23204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.5:20452556 chr05:020452556 0 W/20452556-20452556 FN3451-S SNP A -> G AC=2;AN=184;BQB=0.901611;DP=2732;DP4=1278,1347,6,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.70462e-10;MQSB=0.967205;RPB=0.842227;SGB=66.8296;VDB=0.60972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.5:20469569 chr05:020469569 0 W/20469569-20469569 FN2649-S SNP T -> A AC=1;AN=200;BQB=0.869955;DP=5076;DP4=2435,2404,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.74779e-19;MQSB=0.873963;RPB=0.999006;SGB=73.7728;VDB=0.771594;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.5:20484810 chr05:020484810 0 W/20484810-20484810 FN-215 Single Base Substitution A-G INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN2188-S.SNP.5:20485217 chr05:020485217 0 W/20485217-20485217 FN2188-S SNP C -> A AC=2;AN=190;BQB=0.806638;DP=4550;DP4=1802,2373,18,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.45625e-29;MQSB=0.561742;RPB=0.261;SGB=174.702;VDB=0.0870994;EFF=UTR_3_PRIME(MODIFIER||1016||309|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.1|13|1),UTR_3_PRIME(MODIFIER||1016||270|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.2|13|1),UTR_3_PRIME(MODIFIER||3626||156|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.3|10|1) FN2084-S.SNP.5:20485892 chr05:020485892 0 W/20485892-20485892 FN2084-S SNP G -> A AC=1;AN=168;BQB=0.682178;DP=3319;DP4=1888,1386,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.03943e-07;MQSB=0.999934;RPB=0.448487;SGB=-57.0838;VDB=0.268925;EFF=SPLICE_SITE_REGION(LOW||||309|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.1|11|1),SPLICE_SITE_REGION(LOW||||270|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.2|11|1),SPLICE_SITE_REGION(LOW||||156|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.3|8|1),INTRON(MODIFIER||||309|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.1|11|1),INTRON(MODIFIER||||270|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.2|11|1),INTRON(MODIFIER||||156|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.3|8|1) FN3057-S.SNP.5:20487933 chr05:020487933 0 W/20487933-20487933 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.789064;DP=2824;DP4=1398,1337,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66247e-08;MQSB=0.995125;RPB=0.63784;SGB=35.7479;VDB=0.962079;EFF=UTR_3_PRIME(MODIFIER||910||156|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.3|3|1),INTRON(MODIFIER||||309|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.1|5|1),INTRON(MODIFIER||||270|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.2|5|1) FN3710-S.SNP.5:20489501 chr05:020489501 0 W/20489501-20489501 FN3710-S SNP T -> G AC=2;AN=190;BQB=0.636974;DP=2552;DP4=1197,1218,9,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.67513e-11;MQSB=0.969228;RPB=0.688681;SGB=18.096;VDB=0.599375;EFF=INTRON(MODIFIER||||309|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.1|2|1),INTRON(MODIFIER||||270|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.2|2|1),INTRON(MODIFIER||||156|LOC_Os05g34550|protein_coding|CODING|LOC_Os05g34550.3|2|1) FN3990-S.SNP.5:20491343 chr05:020491343 0 W/20491343-20491343 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.69901;DP=2389;DP4=1088,1157,22,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.04571e-19;MQSB=0.968659;RPB=0.954505;SGB=179.716;VDB=0.18166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.5:20491503 chr05:020491503 0 W/20491503-20491503 FN3425-S SNP G -> A AC=1;AN=184;BQB=0.990642;DP=2805;DP4=1097,1625,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.67296e-07;MQSB=0.993783;RPB=0.859755;SGB=35.7479;VDB=0.136145;EFF=INTRON(MODIFIER||||68|LOC_Os05g34560|protein_coding|CODING|LOC_Os05g34560.1|1|1) FN2279-S.SNP.5:20494055 chr05:020494055 0 W/20494055-20494055 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.0960159;DP=4574;DP4=2187,2060,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55641e-10;MQSB=0.855017;RPB=0.619702;SGB=-79.1188;VDB=0.477164;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.5:20495472 chr05:020495472 0 W/20495472-20495472 FN1646-S Single Base Substitution C-A INTERGENIC Homo SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2619-S.SNP.5:20498080 chr05:020498080 0 W/20498080-20498080 FN2619-S SNP C -> A AC=1;AN=198;BQB=0.704117;DP=4340;DP4=2006,2145,17,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.18062e-14;MQSB=0.632199;RPB=0.795994;SGB=104.69;VDB=0.83705;EFF=INTERGENIC(MODIFIER||||||||||1) FN407-S.SNP.5:20499584 chr05:020499584 0 W/20499584-20499584 FN407-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN-310.SNP.5:20507801 chr05:020507801 0 W/20507801-20507801 FN-310 Single Base Substitution C-T INTRON HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN959-S.SNP.5:20509306 chr05:020509306 0 W/20509306-20509306 FN959-S Single Base Substitution C-G INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN4090-S.SNP.5:20512475 chr05:020512475 0 W/20512475-20512475 FN4090-S SNP C -> T AC=1;AN=182;BQB=0.982986;DP=2369;DP4=1080,1226,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.61088e-07;MQSB=0.979931;RPB=0.915038;SGB=53.1331;VDB=0.97392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.5:20519672 chr05:020519672 0 W/20519672-20519672 FN1358-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN-218.SNP.5:20526044 chr05:020526044 0 W/20526044-20526044 FN-218 Single Base Substitution G-A INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN497-S.SNP.5:20526044 chr05:020526044 0 W/20526044-20526044 FN497-S Single Base Substitution G-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN810-S.SNP.5:20529154 chr05:020529154 0 W/20529154-20529154 FN810-S Single Base Substitution T-A INTRON HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. 706-1.SNP.5:20541202 chr05:020541202 0 W/20541202-20541202 706-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-236.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN-236 Single Base Substitution T-C INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1286-S.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN1286-S Single Base Substitution T-C INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3373-S.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN3373-S SNP T -> C AC=1;AN=184;BQB=0.938503;DP=2922;DP4=1269,1461,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06588e-09;MQSB=0.86017;RPB=0.811591;SGB=6.80232;VDB=0.292284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN3783-S SNP T -> C AC=2;AN=190;BQB=0.996815;DP=2584;DP4=1082,1313,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.74176e-16;MQSB=0.624757;RPB=0.218886;SGB=89.4087;VDB=0.0598013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN3848-S SNP T -> C AC=1;AN=158;BQB=0.934854;DP=2323;DP4=1002,1195,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.39913e-08;MQSB=0.547321;RPB=0.997178;SGB=55.806;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.5:20542035 chr05:020542035 0 W/20542035-20542035 FN963-S Single Base Substitution T-C INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN951-S.SNP.5:20543553 chr05:020543553 0 W/20543553-20543553 FN951-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os05g34640 PHD finger protein, putative, expressed SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN692-S.SNP.5:20543683 chr05:020543683 0 W/20543683-20543683 FN692-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g34640 PHD finger protein, putative, expressed SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-174.SNP.5:20544677 chr05:020544677 0 W/20544677-20544677 FN-174 Single Base Substitution T-A INTRON HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN282-S.SNP.5:20545263 chr05:020545263 0 W/20545263-20545263 FN282-S Single Base Substitution C-A INTRON HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN-309.SNP.5:20545386 chr05:020545386 0 W/20545386-20545386 FN-309 Single Base Substitution G-A INTRON HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1186-S.SNP.5:20549595 chr05:020549595 0 W/20549595-20549595 FN1186-S Single Base Substitution A-G INTRON HOMO SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN770-S.SNP.5:20551739 chr05:020551739 0 W/20551739-20551739 FN770-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g34650 DUF647 domain containing protein, putative, expressed SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN1319-S.SNP.5:20553757 chr05:020553757 0 W/20553757-20553757 FN1319-S Single Base Substitution A-C INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1319-S.SNP.5:20553758 chr05:020553758 0 W/20553758-20553758 FN1319-S Single Base Substitution A-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2677-S.SNP.5:20555523 chr05:020555523 0 W/20555523-20555523 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.924077;DP=4902;DP4=2702,1919,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.26431e-15;MQSB=0.617385;RPB=0.985971;SGB=76.3213;VDB=0.962772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.5:20557008 chr05:020557008 0 W/20557008-20557008 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.565417;DP=4328;DP4=1947,2295,13,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18545e-14;MQSB=0.860038;RPB=0.529151;SGB=-10.6335;VDB=0.00223779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.5:20559590 chr05:020559590 0 W/20559590-20559590 FN1737-S SNP G -> T AC=1;AN=188;BQB=0.99849;DP=3705;DP4=1548,2106,6,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00134953;MQB=1.83693e-10;MQSB=0.963472;RPB=0.96448;SGB=-11.1967;VDB=0.842231;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.5:20566450 chr05:020566450 0 W/20566450-20566450 CW-631-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. CW-631-3-1.SNP.5:20566453 chr05:020566453 0 W/20566453-20566453 CW-631-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN759-S.SNP.5:20567278 chr05:020567278 0 W/20567278-20567278 FN759-S Single Base Substitution C-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN3857-S.SNP.5:20572658 chr05:020572658 0 W/20572658-20572658 FN3857-S SNP C -> A AC=1;AN=158;BQB=0.813965;DP=2412;DP4=1170,1161,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.94302e-12;MQSB=0.883881;RPB=0.769096;SGB=54.2901;VDB=0.847067;EFF=INTRON(MODIFIER||||291|LOC_Os05g34670|protein_coding|CODING|LOC_Os05g34670.1|1|1) FN4151-S.SNP.5:20576534 chr05:020576534 0 W/20576534-20576534 FN4151-S SNP G -> A AC=1;AN=170;BQB=0.992218;DP=2239;DP4=891,1287,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.1847e-08;MQSB=0.994163;RPB=0.276567;SGB=41.7633;VDB=0.264949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.5:20577511 chr05:020577511 0 W/20577511-20577511 FN1158-S Single Base Substitution G-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN4167-S.SNP.5:20579922 chr05:020579922 0 W/20579922-20579922 FN4167-S SNP A -> G AC=1;AN=170;BQB=0.821038;DP=2808;DP4=1511,1155,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.43581e-05;MQSB=0.965513;RPB=0.626229;SGB=-4.32338;VDB=0.793292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.5:20590947 chr05:020590947 0 W/20590947-20590947 FN-261 Single Base Substitution A-C UTR_3_PRIME HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN1438-S.SNP.5:20591241 chr05:020591241 0 W/20591241-20591241 FN1438-S Single Base Substitution T-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN949-S.SNP.5:20593097 chr05:020593097 0 W/20593097-20593097 FN949-S Single Base Substitution C-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN949-S.SNP.5:20593098 chr05:020593098 0 W/20593098-20593098 FN949-S Single Base Substitution A-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2196-S.SNP.5:20601081 chr05:020601081 0 W/20601081-20601081 FN2196-S SNP A -> T AC=1;AN=190;BQB=0.996796;DP=4711;DP4=1807,2570,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.3899e-16;MQSB=0.802207;RPB=0.181059;SGB=92.9626;VDB=0.340697;EFF=INTERGENIC(MODIFIER||||||||||1) W427-1-1.SNP.5:20606006 chr05:020606006 0 W/20606006-20606006 W427-1-1 Single Base Substitution A-C INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1112-S.SNP.5:20610690 chr05:020610690 0 W/20610690-20610690 FN1112-S Single Base Substitution A-G INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2116-S.SNP.5:20610987 chr05:020610987 0 W/20610987-20610987 FN2116-S SNP A -> C AC=2;AN=168;BQB=0.0247646;DP=3649;DP4=1943,1584,31,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.97543e-15;MQSB=0.502521;RPB=0.996687;SGB=-54.3037;VDB=0.63162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.5:20611457 chr05:020611457 0 W/20611457-20611457 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.32114;DP=3623;DP4=1795,1606,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62637e-10;MQSB=0.795214;RPB=0.365078;SGB=-10.4526;VDB=0.513444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.5:20613220 chr05:020613220 0 W/20613220-20613220 FN3848-S SNP T -> C AC=1;AN=158;BQB=0.849806;DP=2478;DP4=1049,1336,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000218783;MQSB=0.99115;RPB=0.118954;SGB=38.3284;VDB=0.716078;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.5:20613439 chr05:020613439 0 W/20613439-20613439 FN957-S Single Base Substitution C-T INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2426.SNP.5:20614536 chr05:020614536 0 W/20614536-20614536 FN2426 SNP C -> T AC=2;AN=200;BQB=0.829559;DP=4743;DP4=1783,2656,20,46;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000210837;MQB=1.4267e-34;MQSB=0.854489;RPB=0.55439;SGB=298.339;VDB=0.857348;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.5:20622354 chr05:020622354 0 W/20622354-20622354 FN1014-S Single Base Substitution C-A INTRON HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN750-S.SNP.5:20625226 chr05:020625226 0 W/20625226-20625226 FN750-S Single Base Substitution G-A INTRON HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2587-S.SNP.5:20625711 chr05:020625711 0 W/20625711-20625711 FN2587-S SNP C -> T AC=2;AN=198;BQB=0.995931;DP=3933;DP4=1695,1983,16,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.85793e-19;MQSB=0.938737;RPB=0.984275;SGB=144.408;VDB=0.959682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P358L|735|LOC_Os05g34760|protein_coding|CODING|LOC_Os05g34760.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P358L|711|LOC_Os05g34760|protein_coding|CODING|LOC_Os05g34760.2|4|1) FN415-S.SNP.5:20635532 chr05:020635532 0 W/20635532-20635532 FN415-S Single Base Substitution G-A INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1625-S.SNP.5:20636146 chr05:020636146 0 W/20636146-20636146 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.5:20636146 chr05:020636146 0 W/20636146-20636146 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.0126473;DP=3016;DP4=716,2259,6,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.49094e-12;MQSB=0.726371;RPB=0.225462;SGB=-10.1101;VDB=0.173949;EFF=INTERGENIC(MODIFIER||||||||||1) FN4145-S.SNP.5:20639343 chr05:020639343 0 W/20639343-20639343 FN4145-S SNP A -> G AC=2;AN=170;BQB=0.999294;DP=2498;DP4=1143,1234,21,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.49181e-18;MQSB=0.976827;RPB=0.521002;SGB=132.282;VDB=0.374066;EFF=INTRON(MODIFIER||||620|LOC_Os05g34780|protein_coding|CODING|LOC_Os05g34780.1|3|1) FN2417.SNP.5:20644769 chr05:020644769 0 W/20644769-20644769 FN2417 SNP A -> T AC=1;AN=200;BQB=0.429578;DP=4869;DP4=2400,2244,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.31716e-09;MQSB=0.613212;RPB=0.965303;SGB=54.2646;VDB=0.628815;EFF=INTRON(MODIFIER||||247|LOC_Os05g34790|protein_coding|CODING|LOC_Os05g34790.1|1|1) FN2417.SNP.5:20644770 chr05:020644770 0 W/20644770-20644770 FN2417 SNP G -> T AC=1;AN=200;BQB=0.99614;DP=4886;DP4=2416,2251,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.45957e-08;MQSB=0.638252;RPB=0.403093;SGB=51.0851;VDB=0.658468;EFF=INTRON(MODIFIER||||247|LOC_Os05g34790|protein_coding|CODING|LOC_Os05g34790.1|1|1) FN-124.SNP.5:20655418 chr05:020655418 0 W/20655418-20655418 FN-124 Single Base Substitution G-C INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN1366-S.SNP.5:20656742 chr05:020656742 0 W/20656742-20656742 FN1366-S Single Base Substitution C-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1093-S.SNP.5:20661750 chr05:020661750 0 W/20661750-20661750 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2557-S.SNP.5:20669273 chr05:020669273 0 W/20669273-20669273 FN2557-S SNP C -> T AC=1;AN=198;BQB=0.882016;DP=4474;DP4=2096,1976,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.89837e-07;MQSB=0.443242;RPB=0.85468;SGB=6.15916;VDB=0.601875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.5:20671160 chr05:020671160 0 W/20671160-20671160 FN2412 SNP C -> A AC=1;AN=200;BQB=0.253875;DP=5088;DP4=2268,2474,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.20349e-11;MQSB=0.767866;RPB=0.464684;SGB=29.4849;VDB=0.536368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.5:20677196 chr05:020677196 0 W/20677196-20677196 FN2216-S SNP T -> G AC=1;AN=190;BQB=0.985441;DP=4887;DP4=2202,2144,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6982e-11;MQSB=0.959229;RPB=0.999431;SGB=-9.34484;VDB=0.262701;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.5:20684808 chr05:020684808 0 W/20684808-20684808 FN754-S Single Base Substitution T-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3534-S.SNP.5:20684809 chr05:020684809 0 W/20684809-20684809 FN3534-S SNP A -> T AC=1;AN=188;BQB=0.996878;DP=2126;DP4=442,1573,4,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.83067e-10;MQSB=0.970032;RPB=0.999957;SGB=10.1681;VDB=0.453013;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.5:20702660 chr05:020702660 0 W/20702660-20702660 FN565-S Single Base Substitution G-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN2169-S.SNP.5:20706076 chr05:020706076 0 W/20706076-20706076 FN2169-S SNP G -> A AC=2;AN=168;BQB=0.938511;DP=3155;DP4=1704,1397,10,20;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00538827;MQB=2.44938e-12;MQSB=0.160032;RPB=0.136914;SGB=58.647;VDB=0.188762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.5:20709931 chr05:020709931 0 W/20709931-20709931 FN2495 SNP T -> G AC=2;AN=200;BQB=0.974189;DP=4506;DP4=2128,2172,15,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.75619e-18;MQSB=0.405717;RPB=0.685588;SGB=112.373;VDB=0.296329;EFF=INTRON(MODIFIER||||335|LOC_Os05g34870|protein_coding|CODING|LOC_Os05g34870.1|1|1) FN2478.SNP.5:20710182 chr05:020710182 0 W/20710182-20710182 FN2478 SNP A -> G AC=1;AN=200;BQB=0.884343;DP=4660;DP4=1862,2360,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12292e-16;MQSB=0.817033;RPB=0.981076;SGB=25.5416;VDB=0.495303;EFF=INTRON(MODIFIER||||335|LOC_Os05g34870|protein_coding|CODING|LOC_Os05g34870.1|1|1) FN-175.SNP.5:20720234 chr05:020720234 0 W/20720234-20720234 FN-175 Single Base Substitution A-T INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-88.SNP.5:20722684 chr05:020722684 0 W/20722684-20722684 FN-88 Single Base Substitution T-G INTRON HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN2322.SNP.5:20730174 chr05:020730174 0 W/20730174-20730174 FN2322 SNP G -> A AC=1;AN=192;BQB=0.0980338;DP=5125;DP4=2481,2301,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.04361e-10;MQSB=0.873891;RPB=0.611189;SGB=-93.4956;VDB=0.788411;EFF=INTRON(MODIFIER||||695|LOC_Os05g34900|protein_coding|CODING|LOC_Os05g34900.1|10|1),INTRON(MODIFIER||||669|LOC_Os05g34900|protein_coding|CODING|LOC_Os05g34900.2|10|1) FN4022-S.SNP.5:20743332 chr05:020743332 0 W/20743332-20743332 FN4022-S SNP C -> A AC=2;AN=168;BQB=0.686583;DP=2259;DP4=1077,1062,14,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.42871e-08;MQSB=0.989473;RPB=0.895962;SGB=31.908;VDB=0.717086;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.5:20743922 chr05:020743922 0 W/20743922-20743922 FN-215 Single Base Substitution G-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN715-S.SNP.5:20753711 chr05:020753711 0 W/20753711-20753711 FN715-S Single Base Substitution G-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1517-S.SNP.5:20757363 chr05:020757363 0 W/20757363-20757363 FN1517-S Single Base Substitution C-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN-241.SNP.5:20758489 chr05:020758489 0 W/20758489-20758489 FN-241 Single Base Substitution A-T INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2687-S.SNP.5:20768500 chr05:020768500 0 W/20768500-20768500 FN2687-S SNP G -> A AC=1;AN=200;BQB=0.962019;DP=4895;DP4=2656,1998,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.88679e-15;MQSB=0.970037;RPB=0.589569;SGB=76.3213;VDB=0.324843;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.5:20771356 chr05:020771356 0 W/20771356-20771356 FN907-S Single Base Substitution G-A INTERGENIC HOMO SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3283-S.SNP.5:20778526 chr05:020778526 0 W/20778526-20778526 FN3283-S SNP T -> G AC=1;AN=184;BQB=0.992192;DP=3233;DP4=1664,1429,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09933e-07;MQSB=0.92736;RPB=0.607974;SGB=28.7043;VDB=0.0699221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.5:20778527 chr05:020778527 0 W/20778527-20778527 FN3283-S SNP G -> T AC=1;AN=184;BQB=0.96765;DP=3243;DP4=1666,1464,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13841e-07;MQSB=0.98268;RPB=0.367473;SGB=28.7043;VDB=0.159794;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.5:20778528 chr05:020778528 0 W/20778528-20778528 FN3283-S SNP A -> T AC=1;AN=184;BQB=0.97699;DP=3252;DP4=1667,1478,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.69226e-07;MQSB=0.963077;RPB=0.87466;SGB=15.7097;VDB=0.124926;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.5:20779103 chr05:020779103 0 W/20779103-20779103 FN1693-S SNP C -> T AC=2;AN=188;BQB=0.994121;DP=2661;DP4=909,1701,4,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.64369e-10;MQSB=0.996148;RPB=0.997364;SGB=71.6954;VDB=0.876292;EFF=START_GAINED(LOW||||496|LOC_Os05g34980|protein_coding|CODING|LOC_Os05g34980.1|1|1),UTR_5_PRIME(MODIFIER||80||496|LOC_Os05g34980|protein_coding|CODING|LOC_Os05g34980.1|1|1) FN728-S.SNP.5:20785481 chr05:020785481 0 W/20785481-20785481 FN728-S Single Base Substitution T-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN3506-S.SNP.5:20802278 chr05:020802278 0 W/20802278-20802278 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.947671;DP=3657;DP4=2127,1463,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.93941e-09;MQSB=0.999705;RPB=0.99947;SGB=58.0655;VDB=0.010546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.5:20809449 chr05:020809449 0 W/20809449-20809449 FN2731-S SNP A -> C AC=2;AN=200;BQB=0.283076;DP=4834;DP4=2282,2352,26,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25725e-26;MQSB=0.939155;RPB=0.465484;SGB=224.656;VDB=0.346425;EFF=INTRON(MODIFIER||||358|LOC_Os05g35060|protein_coding|CODING|LOC_Os05g35060.1|3|1) FN703-S.SNP.5:20813911 chr05:020813911 0 W/20813911-20813911 FN703-S Single Base Substitution G-A INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2194-S.SNP.5:20822126 chr05:020822126 0 W/20822126-20822126 FN2194-S SNP T -> C AC=1;AN=190;BQB=0.999173;DP=4674;DP4=2292,2046,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.5496e-07;MQSB=0.99997;RPB=0.538732;SGB=53.6492;VDB=0.56783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3728-S.SNP.5:20823221 chr05:020823221 0 W/20823221-20823221 FN3728-S SNP C -> A AC=1;AN=190;BQB=0.833717;DP=2796;DP4=1278,1400,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31639e-06;MQSB=0.957611;RPB=0.970936;SGB=32.5467;VDB=0.30597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.5:20826319 chr05:020826319 0 W/20826319-20826319 FN2564-S SNP T -> A AC=2;AN=198;BQB=0.837978;DP=4004;DP4=2110,1623,10,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.93148e-11;MQSB=0.987811;RPB=0.962179;SGB=86.3098;VDB=0.23187;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.5:20826976 chr05:020826976 0 W/20826976-20826976 FN4126-S SNP C -> T AC=2;AN=182;BQB=0.856847;DP=1816;DP4=610,1123,1,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00110132;MQB=4.48244e-06;MQSB=0.0193953;RPB=0.863253;SGB=57.644;VDB=0.570811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.5:20827486 chr05:020827486 0 W/20827486-20827486 FN3925-S SNP G -> A AC=1;AN=158;BQB=0.891732;DP=1508;DP4=958,396,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000167636;MQSB=0.00288201;RPB=0.863092;SGB=37.4429;VDB=0.584371;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.5:20828193 chr05:020828193 0 W/20828193-20828193 FN662-S Single Base Substitution A-G INTERGENIC HOMO SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN2146-S.SNP.5:20830494 chr05:020830494 0 W/20830494-20830494 FN2146-S SNP C -> G AC=1;AN=168;BQB=0.137357;DP=4009;DP4=1916,2053,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.23439e-09;MQSB=0.997797;RPB=0.680439;SGB=-98.0622;VDB=0.993544;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.5:20833405 chr05:020833405 0 W/20833405-20833405 FN732-S Single Base Substitution C-A INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN732-S.SNP.5:20833406 chr05:020833406 0 W/20833406-20833406 FN732-S Single Base Substitution C-G INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN928-S.SNP.5:20835774 chr05:020835774 0 W/20835774-20835774 FN928-S Single Base Substitution G-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN4146-S.SNP.5:20847974 chr05:020847974 0 W/20847974-20847974 FN4146-S SNP A -> G AC=1;AN=170;BQB=0.893888;DP=2724;DP4=1405,1213,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24213e-11;MQSB=0.635084;RPB=0.974548;SGB=27.2119;VDB=0.0325323;EFF=INTRON(MODIFIER||||376|LOC_Os05g35110|protein_coding|CODING|LOC_Os05g35110.1|1|1) FN3469-S.SNP.5:20851516 chr05:020851516 0 W/20851516-20851516 FN3469-S SNP G -> T AC=1;AN=184;BQB=0.972883;DP=2360;DP4=1331,955,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43718e-06;MQSB=0.813656;RPB=0.964677;SGB=25.1826;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.5:20858651 chr05:020858651 0 W/20858651-20858651 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.90313;DP=3123;DP4=1597,1448,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0102466;MQB=0.509741;MQSB=0.180617;RPB=0.856571;SGB=48.6223;VDB=0.888914;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN-166 Single Base Substitution C-T INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1188-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN1188-S Single Base Substitution C-T INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1348-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1630-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN1630-S Single Base Substitution C-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1707-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.385571;DP=2193;DP4=1185,966,4,16;HOB=0.0210502;ICB=0.494738;MQ=31;MQ0F=0.131783;MQB=0.983533;MQSB=1.76869e-09;RPB=0.985193;SGB=-12.8266;VDB=0.542123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN2749-S SNP C -> T AC=1;AN=200;BQB=0.849558;DP=4665;DP4=2334,2004,7,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0165059;MQB=0.0967509;MQSB=0.00215661;RPB=0.990798;SGB=54.6902;VDB=0.364228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.999993;DP=3190;DP4=1869,1246,12,13;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.022884;MQB=0.356385;MQSB=1.05181e-05;RPB=0.779773;SGB=107.526;VDB=0.173392;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.998545;DP=2929;DP4=1655,1177,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.025606;MQB=0.267231;MQSB=2.1727e-07;RPB=0.7397;SGB=46.7622;VDB=0.527988;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN4156-S SNP C -> T AC=1;AN=170;BQB=0.896257;DP=2528;DP4=1425,1041,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0193829;MQB=0.905687;MQSB=1.40867e-07;RPB=0.745059;SGB=52.0913;VDB=0.373679;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.5:20860796 chr05:020860796 0 W/20860796-20860796 FN425-S Single Base Substitution C-T INTERGENIC HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1332-S.SNP.5:20864614 chr05:020864614 0 W/20864614-20864614 FN1332-S Single Base Substitution A-G INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1423-S.SNP.5:20867876 chr05:020867876 0 W/20867876-20867876 FN1423-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g35130 retrotransposon protein, putative, unclassified SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3364-S.SNP.5:20874200 chr05:020874200 0 W/20874200-20874200 FN3364-S SNP T -> C AC=1;AN=184;BQB=0.873285;DP=3011;DP4=1521,1426,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000996347;MQB=0.00144376;MQSB=0.935456;RPB=0.809774;SGB=30.6558;VDB=0.714572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.5:20878085 chr05:020878085 0 W/20878085-20878085 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.877539;DP=3318;DP4=1781,1387,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33966e-07;MQSB=0.997168;RPB=0.184585;SGB=62.3078;VDB=0.196919;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V36|603|LOC_Os05g35160|protein_coding|CODING|LOC_Os05g35160.1|1|1) FN2530-S.SNP.5:20885730 chr05:020885730 0 W/20885730-20885730 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.96223;DP=3864;DP4=1842,1808,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.99207e-05;MQSB=0.821325;RPB=0.668469;SGB=25.7687;VDB=0.838098;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.5:20891404 chr05:020891404 0 W/20891404-20891404 FN899-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g35180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN747-S.SNP.5:20896796 chr05:020896796 0 W/20896796-20896796 FN747-S Single Base Substitution G-A INTRON HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN_770-6-1.SNP.5:20898138 chr05:020898138 0 W/20898138-20898138 FN_770-6-1 Single Base Substitution C-T HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2278-S.SNP.5:20908448 chr05:020908448 0 W/20908448-20908448 FN2278-S SNP T -> G AC=1;AN=190;BQB=0.829343;DP=4777;DP4=2160,2295,13,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06659e-21;MQSB=0.999608;RPB=0.768796;SGB=82.3989;VDB=0.23922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.5:20913249 chr05:020913249 0 W/20913249-20913249 FN2597-S SNP A -> C AC=1;AN=198;BQB=0.973235;DP=4519;DP4=2265,2029,14,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09074e-19;MQSB=0.983915;RPB=0.0579969;SGB=73.4614;VDB=0.142635;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.5:20914780 chr05:020914780 0 W/20914780-20914780 FN-268 Single Base Substitution T-C INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3050-S.SNP.5:20918215 chr05:020918215 0 W/20918215-20918215 FN3050-S SNP A -> T AC=2;AN=184;BQB=0.652984;DP=2968;DP4=1303,1555,7,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27416e-09;MQSB=0.130199;RPB=0.374173;SGB=84.9167;VDB=0.527286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.5:20919093 chr05:020919093 0 W/20919093-20919093 FN3382-S SNP T -> A AC=2;AN=184;BQB=0.667212;DP=2181;DP4=1028,921,14,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.60522e-13;MQSB=0.981114;RPB=0.384364;SGB=89.4385;VDB=0.0207247;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.5:20919094 chr05:020919094 0 W/20919094-20919094 FN3382-S SNP T -> A AC=2;AN=184;BQB=0.938038;DP=2185;DP4=1019,981,14,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.79303e-12;MQSB=0.950999;RPB=0.163595;SGB=63.9222;VDB=0.00672654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.5:20923268 chr05:020923268 0 W/20923268-20923268 FN2468 SNP G -> C AC=1;AN=200;BQB=0.7596;DP=4736;DP4=2261,2080,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6736e-08;MQSB=0.999674;RPB=0.397413;SGB=54.2646;VDB=0.641758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.5:20932286 chr05:020932286 0 W/20932286-20932286 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.351856;DP=2965;DP4=1365,1327,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000337268;MQB=4.754e-07;MQSB=0.698606;RPB=0.937964;SGB=-15.2358;VDB=0.992871;EFF=INTRON(MODIFIER||||190|LOC_Os05g35230|protein_coding|CODING|LOC_Os05g35230.1|1|1) FN3324-S.SNP.5:20932287 chr05:020932287 0 W/20932287-20932287 FN3324-S SNP A -> T AC=1;AN=184;BQB=0.807561;DP=2969;DP4=1350,1345,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000336814;MQB=4.69105e-08;MQSB=0.806703;RPB=0.872901;SGB=20.7533;VDB=0.978551;EFF=INTRON(MODIFIER||||190|LOC_Os05g35230|protein_coding|CODING|LOC_Os05g35230.1|1|1) FN490-S.SNP.5:20943766 chr05:020943766 0 W/20943766-20943766 FN490-S Single Base Substitution C-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN3381-S.SNP.5:20944024 chr05:020944024 0 W/20944024-20944024 FN3381-S SNP C -> T AC=2;AN=184;BQB=0.944702;DP=2760;DP4=1231,1419,5,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.17732e-10;MQSB=0.810334;RPB=0.87536;SGB=71.3514;VDB=0.767704;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.5:20945151 chr05:020945151 0 W/20945151-20945151 FN-236 Single Base Substitution C-T UTR_3_PRIME HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-263.SNP.5:20949134 chr05:020949134 0 W/20949134-20949134 FN-263 Single Base Substitution A-T INTRON HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN1721-S.SNP.5:20951889 chr05:020951889 0 W/20951889-20951889 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.111301;DP=1712;DP4=1365,316,13,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.05341e-06;MQSB=0.0340443;RPB=0.449141;SGB=7.0815;VDB=0.131244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.5:20958283 chr05:020958283 0 W/20958283-20958283 FN1023-S Single Base Substitution G-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN442-S.SNP.5:20959112 chr05:020959112 0 W/20959112-20959112 FN442-S Single Base Substitution C-T INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-268.SNP.5:20959395 chr05:020959395 0 W/20959395-20959395 FN-268 Single Base Substitution C-T INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN244-S.SNP.5:20964280 chr05:020964280 0 W/20964280-20964280 FN244-S Single Base Substitution T-C INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN244-S.SNP.5:20964281 chr05:020964281 0 W/20964281-20964281 FN244-S Single Base Substitution A-G INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2373.SNP.5:20977566 chr05:020977566 0 W/20977566-20977566 FN2373 SNP T -> C AC=1;AN=192;BQB=0.274201;DP=5234;DP4=2443,2519,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74443e-15;MQSB=0.902989;RPB=0.0469941;SGB=86.1165;VDB=0.34895;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.5:20977634 chr05:020977634 0 W/20977634-20977634 FN4083-S SNP C -> T AC=1;AN=182;BQB=0.928174;DP=2821;DP4=1279,1441,13,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.45298e-13;MQSB=0.991796;RPB=0.411381;SGB=74.2472;VDB=0.57875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.5:20980742 chr05:020980742 0 W/20980742-20980742 FN1423-S Single Base Substitution C-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1402-S.SNP.5:20981201 chr05:020981201 0 W/20981201-20981201 FN1402-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2179-S.SNP.5:20998166 chr05:020998166 0 W/20998166-20998166 FN2179-S SNP A -> G AC=1;AN=168;BQB=0.422728;DP=2939;DP4=1423,1460,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.64141e-07;MQSB=0.966837;RPB=0.705037;SGB=-61.7914;VDB=0.480464;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S47P|775|LOC_Os05g35360|protein_coding|CODING|LOC_Os05g35360.1|1|1) FN4146-S.SNP.5:21004613 chr05:021004613 0 W/21004613-21004613 FN4146-S SNP A -> G AC=1;AN=170;BQB=0.59878;DP=2442;DP4=1224,1112,13,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.1324e-10;MQSB=0.207313;RPB=0.555749;SGB=34.5398;VDB=0.786673;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.5:21006566 chr05:021006566 0 W/21006566-21006566 FN2370 SNP G -> A AC=1;AN=192;BQB=0.489809;DP=4752;DP4=2195,2226,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.12272e-12;MQSB=0.567899;RPB=0.918706;SGB=10.4835;VDB=0.933939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.5:21012802 chr05:021012802 0 W/21012802-21012802 FN1022-S Single Base Substitution A-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3695-S.SNP.5:21013413 chr05:021013413 0 W/21013413-21013413 FN3695-S SNP T -> C AC=2;AN=190;BQB=0.642151;DP=2625;DP4=1299,1232,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.1357e-11;MQSB=0.985157;RPB=0.99272;SGB=38.983;VDB=0.77986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.5:21014764 chr05:021014764 0 W/21014764-21014764 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.997277;DP=2865;DP4=1156,1551,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30873e-13;MQSB=0.939669;RPB=0.98684;SGB=44.0621;VDB=0.0101764;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.5:21017815 chr05:021017815 0 W/21017815-21017815 FN430-S Single Base Substitution G-A INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN2424.SNP.5:21021815 chr05:021021815 0 W/21021815-21021815 FN2424 SNP G -> A AC=2;AN=200;BQB=0.838947;DP=3430;DP4=1689,1471,16,11;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.291837;MQB=0.769903;MQSB=0;RPB=0.977311;SGB=55.5366;VDB=0.829163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.5:21029179 chr05:021029179 0 W/21029179-21029179 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.355505;DP=3607;DP4=1627,1898,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.178542;MQB=0.279209;MQSB=0;RPB=0.639488;SGB=71.3514;VDB=0.346701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.5:21044982 chr05:021044982 0 W/21044982-21044982 FN1202-S Single Base Substitution C-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2330.SNP.5:21058196 chr05:021058196 0 W/21058196-21058196 FN2330 SNP C -> T AC=1;AN=192;BQB=0.350181;DP=4762;DP4=2386,1862,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209996;MQB=8.71552e-14;MQSB=0.763272;RPB=0.240055;SGB=46.8644;VDB=0.884327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.5:21062877 chr05:021062877 0 W/21062877-21062877 FN2207-S SNP A -> G AC=1;AN=190;BQB=0.562769;DP=4830;DP4=2076,2400,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.06377e-08;MQSB=0.915988;RPB=0.544401;SGB=26.2136;VDB=0.804669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.5:21064383 chr05:021064383 0 W/21064383-21064383 FN2274-S SNP A -> G AC=1;AN=190;BQB=0.619064;DP=4591;DP4=2077,2010,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43885e-10;MQSB=0.773131;RPB=0.994173;SGB=-11.0065;VDB=0.493422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.5:21066958 chr05:021066958 0 W/21066958-21066958 FN2151-S SNP G -> A AC=2;AN=168;BQB=0.128829;DP=3664;DP4=1408,2197,13,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.19409e-19;MQSB=0.910479;RPB=0.334799;SGB=-144.307;VDB=0.583482;EFF=INTRON(MODIFIER||||585|LOC_Os05g35460|protein_coding|CODING|LOC_Os05g35460.1|1|1) FN1459-S.SNP.5:21071461 chr05:021071461 0 W/21071461-21071461 FN1459-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN266-S.SNP.5:21072200 chr05:021072200 0 W/21072200-21072200 FN266-S Single Base Substitution G-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1234-S.SNP.5:21075115 chr05:021075115 0 W/21075115-21075115 FN1234-S Single Base Substitution C-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN3388-S.SNP.5:21076602 chr05:021076602 0 W/21076602-21076602 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.618624;DP=3214;DP4=1525,1564,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26577e-10;MQSB=0.93848;RPB=0.995776;SGB=15.9331;VDB=0.925785;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.5:21085116 chr05:021085116 0 W/21085116-21085116 FN-348 Single Base Substitution T-A INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1724-S.SNP.5:21085222 chr05:021085222 0 W/21085222-21085222 FN1724-S SNP T -> A AC=1;AN=188;BQB=0.472151;DP=4174;DP4=2348,1793,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18464e-13;MQSB=0.998861;RPB=0.988598;SGB=78.5038;VDB=0.0918121;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.5:21086966 chr05:021086966 0 W/21086966-21086966 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3733-S.SNP.5:21089268 chr05:021089268 0 W/21089268-21089268 FN3733-S SNP T -> G AC=1;AN=190;BQB=0.960032;DP=3029;DP4=1500,1349,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.85167e-09;MQSB=0.94157;RPB=0.87608;SGB=57.4238;VDB=0.846687;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.5:21097492 chr05:021097492 0 W/21097492-21097492 FN4040-S SNP A -> T AC=1;AN=168;BQB=0.922497;DP=2761;DP4=1420,1209,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.31541e-09;MQSB=0.994789;RPB=0.068386;SGB=74.3269;VDB=0.100982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.5:21097751 chr05:021097751 0 W/21097751-21097751 FN1465-S Single Base Substitution T-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN-166.SNP.5:21098587 chr05:021098587 0 W/21098587-21098587 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1602-S.SNP.5:21101749 chr05:021101749 0 W/21101749-21101749 FN1602-S Single Base Substitution A-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3422-S.SNP.5:21103087 chr05:021103087 0 W/21103087-21103087 FN3422-S SNP A -> G AC=1;AN=184;BQB=0.70197;DP=3075;DP4=1731,1174,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20349e-06;MQSB=0.757386;RPB=0.779842;SGB=20.7533;VDB=0.0348516;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.5:21107162 chr05:021107162 0 W/21107162-21107162 FN733-S Single Base Substitution A-T INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN-135.SNP.5:21112759 chr05:021112759 0 W/21112759-21112759 FN-135 Single Base Substitution C-G INTRON HOMO SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN2429.SNP.5:21113061 chr05:021113061 0 W/21113061-21113061 FN2429 SNP T -> C AC=2;AN=200;BQB=0.99941;DP=3610;DP4=1636,1468,17,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.05659e-24;MQSB=0.000236643;RPB=0.991471;SGB=126.794;VDB=0.365368;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P130|526|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.1|1|1),UTR_5_PRIME(MODIFIER||2446||364|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.2|2|1) FN2429.SNP.5:21113072 chr05:021113072 0 W/21113072-21113072 FN2429 SNP G -> C AC=2;AN=200;BQB=0.914988;DP=3673;DP4=1780,1658,17,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.093e-24;MQSB=0.000165902;RPB=0.939804;SGB=169.394;VDB=0.307654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R134T|526|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.1|1|1),UTR_5_PRIME(MODIFIER||2435||364|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.2|2|1) FN2429.SNP.5:21113073 chr05:021113073 0 W/21113073-21113073 FN2429 SNP G -> A AC=2;AN=200;BQB=0.208319;DP=3663;DP4=1774,1662,18,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.31063e-24;MQSB=0.00016771;RPB=0.998311;SGB=126.794;VDB=0.426519;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R134|526|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.1|1|1),UTR_5_PRIME(MODIFIER||2434||364|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.2|2|1) FN2429.SNP.5:21113076 chr05:021113076 0 W/21113076-21113076 FN2429 SNP G -> A AC=2;AN=200;BQB=0.00422376;DP=3660;DP4=1752,1700,17,16;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.16085e-21;MQSB=0.000675899;RPB=0.636409;SGB=146.368;VDB=0.175178;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K135|526|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.1|1|1),UTR_5_PRIME(MODIFIER||2431||364|LOC_Os05g35520|protein_coding|CODING|LOC_Os05g35520.2|2|1) FN_N1-130-1.SNP.5:21113979 chr05:021113979 0 W/21113979-21113979 FN_N1-130-1 Single Base Substitution C-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. N1-130-2.SNP.5:21113979 chr05:021113979 0 W/21113979-21113979 N1-130-2 Single Base Substitution C-T INTRON Homo SNo: 1377, Mutant_ID: N1-130-2, Generation: M2, Mutations: 30, Genes: 7, Seed availability: Yes. N1-130-3.SNP.5:21113979 chr05:021113979 0 W/21113979-21113979 N1-130-3 Single Base Substitution C-T INTRON Homo SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. FN427-S.SNP.5:21128111 chr05:021128111 0 W/21128111-21128111 FN427-S Single Base Substitution A-C INTRON HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3364-S.SNP.5:21132329 chr05:021132329 0 W/21132329-21132329 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.851362;DP=3307;DP4=1665,1549,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.42572e-07;MQSB=0.992186;RPB=0.708792;SGB=57.786;VDB=0.818853;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C43|110|LOC_Os05g35560|protein_coding|CODING|LOC_Os05g35560.1|1|1) FN852-S.SNP.5:21140974 chr05:021140974 0 W/21140974-21140974 FN852-S Single Base Substitution G-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN1131-S.SNP.5:21149034 chr05:021149034 0 W/21149034-21149034 FN1131-S Single Base Substitution T-A INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN553-S.SNP.5:21151685 chr05:021151685 0 W/21151685-21151685 FN553-S Single Base Substitution T-C INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2600-S.SNP.5:21153665 chr05:021153665 0 W/21153665-21153665 FN2600-S SNP C -> A AC=1;AN=198;BQB=0.344217;DP=4388;DP4=2230,1922,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000227894;MQB=1.17334e-10;MQSB=0.999902;RPB=0.580519;SGB=25.3006;VDB=0.635586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.5:21157847 chr05:021157847 0 W/21157847-21157847 FN2650-S SNP A -> C AC=1;AN=200;BQB=0.130862;DP=4503;DP4=2351,1874,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6811e-10;MQSB=0.953572;RPB=0.931994;SGB=-12.5051;VDB=0.11778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.5:21164600 chr05:021164600 0 W/21164600-21164600 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.482943;DP=4499;DP4=2232,2045,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.9368e-12;MQSB=0.948528;RPB=0.249838;SGB=90.9049;VDB=0.111796;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.5:21171053 chr05:021171053 0 W/21171053-21171053 FN_814-7-1 Single Base Substitution C-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1035-S.SNP.5:21171554 chr05:021171554 0 W/21171554-21171554 FN1035-S Single Base Substitution C-T INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2740-S.SNP.5:21177289 chr05:021177289 0 W/21177289-21177289 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.99751;DP=4970;DP4=2357,2372,4,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0118712;MQB=0.00480786;MQSB=0.634066;RPB=0.727892;SGB=22.2439;VDB=0.830889;EFF=INTRON(MODIFIER||||581|LOC_Os05g35650|protein_coding|CODING|LOC_Os05g35650.2|4|1) FN791-S.SNP.5:21182393 chr05:021182393 0 W/21182393-21182393 FN791-S Single Base Substitution G-A INTRON HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN321-S.SNP.5:21185963 chr05:021185963 0 W/21185963-21185963 FN321-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g35650 peptide transporter PTR2, putative, expressed SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2284.SNP.5:21194951 chr05:021194951 0 W/21194951-21194951 FN2284 SNP G -> A AC=1;AN=192;BQB=0.588468;DP=4757;DP4=2076,2424,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.15355e-09;MQSB=0.378872;RPB=0.952341;SGB=76.5965;VDB=0.827646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.5:21195630 chr05:021195630 0 W/21195630-21195630 FN2399 SNP C -> T AC=1;AN=200;BQB=0.897476;DP=4066;DP4=2071,1780,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.55152e-12;MQSB=0.50581;RPB=0.61062;SGB=17.5158;VDB=0.601348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.5:21196292 chr05:021196292 0 W/21196292-21196292 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.956317;DP=2968;DP4=1230,1647,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23453e-07;MQSB=0.996885;RPB=0.779956;SGB=44.4357;VDB=0.406085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.5:21200797 chr05:021200797 0 W/21200797-21200797 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.465213;DP=4721;DP4=2258,2161,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09382e-12;MQSB=0.995421;RPB=0.857728;SGB=69.1109;VDB=0.792185;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.5:21202454 chr05:021202454 0 W/21202454-21202454 FN666-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g35710 coiled-coil domain-containing protein 47 precursor, putative, expressed SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2241-S.SNP.5:21202872 chr05:021202872 0 W/21202872-21202872 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.0230638;DP=4115;DP4=2223,1618,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04932e-06;MQSB=0.0890135;RPB=0.470635;SGB=28.7675;VDB=0.747005;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L263|490|LOC_Os05g35710|protein_coding|CODING|LOC_Os05g35710.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L263|490|LOC_Os05g35710|protein_coding|CODING|LOC_Os05g35710.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L263|350|LOC_Os05g35710|protein_coding|CODING|LOC_Os05g35710.3|1|1) FN-50.SNP.5:21203685 chr05:021203685 0 W/21203685-21203685 FN-50 Single Base Substitution T-C INTRON Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN2239-S.SNP.5:21206381 chr05:021206381 0 W/21206381-21206381 FN2239-S SNP T -> A AC=2;AN=190;BQB=0.429675;DP=4947;DP4=2450,2124,24,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.65647e-23;MQSB=0.999584;RPB=0.960915;SGB=160.486;VDB=0.368571;EFF=INTRON(MODIFIER||||163|LOC_Os05g35720|protein_coding|CODING|LOC_Os05g35720.1|2|1) FN-77.SNP.5:21212124 chr05:021212124 0 W/21212124-21212124 FN-77 Single Base Substitution A-G INTRON HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN3398-S.SNP.5:21214537 chr05:021214537 0 W/21214537-21214537 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.756762;DP=3055;DP4=1037,1914,1,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00019134;MQSB=0.860744;RPB=0.90136;SGB=39.699;VDB=0.448352;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.5:21234481 chr05:021234481 0 W/21234481-21234481 FN750-S Single Base Substitution T-C INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2083-S.SNP.5:21239616 chr05:021239616 0 W/21239616-21239616 FN2083-S SNP G -> T AC=1;AN=168;BQB=0.293651;DP=3737;DP4=1686,1996,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.53226e-10;MQSB=0.981316;RPB=0.853129;SGB=-40.6433;VDB=0.631714;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.5:21239966 chr05:021239966 0 W/21239966-21239966 W247-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1119-S.SNP.5:21244183 chr05:021244183 0 W/21244183-21244183 FN1119-S Single Base Substitution G-A INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN229-S.SNP.5:21245259 chr05:021245259 0 W/21245259-21245259 FN229-S Single Base Substitution C-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1212-S.SNP.5:21255140 chr05:021255140 0 W/21255140-21255140 FN1212-S Single Base Substitution T-G INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1421-S.SNP.5:21260574 chr05:021260574 0 W/21260574-21260574 FN1421-S Single Base Substitution G-A INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1513-S.SNP.5:21261984 chr05:021261984 0 W/21261984-21261984 FN1513-S Single Base Substitution G-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN471-S.SNP.5:21265846 chr05:021265846 0 W/21265846-21265846 FN471-S Single Base Substitution G-T INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2485.SNP.5:21268343 chr05:021268343 0 W/21268343-21268343 FN2485 SNP C -> A AC=1;AN=200;BQB=0.00533277;DP=4684;DP4=2177,2119,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.41447e-10;MQSB=0.932547;RPB=0.470197;SGB=14.3054;VDB=0.864913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.5:21273092 chr05:021273092 0 W/21273092-21273092 FN1366-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN-119.SNP.5:21277643 chr05:021277643 0 W/21277643-21277643 FN-119 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1279-S.SNP.5:21292498 chr05:021292498 0 W/21292498-21292498 FN1279-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g35900 conserved hypothetical protein SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3657-S.SNP.5:21293348 chr05:021293348 0 W/21293348-21293348 FN3657-S SNP A -> C AC=2;AN=190;BQB=0.905531;DP=2947;DP4=1338,1351,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.36269e-15;MQSB=0.675215;RPB=0.832174;SGB=-7.12933;VDB=0.560399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.5:21297578 chr05:021297578 0 W/21297578-21297578 FN3698-S SNP C -> A AC=1;AN=190;BQB=0.312739;DP=1550;DP4=912,562,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000184444;MQSB=0.613666;RPB=0.714449;SGB=13.4442;VDB=0.950175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.5:21297594 chr05:021297594 0 W/21297594-21297594 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.833893;DP=1679;DP4=953,632,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000143304;MQSB=0.147484;RPB=0.693421;SGB=26.3271;VDB=0.0378314;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.5:21299737 chr05:021299737 0 W/21299737-21299737 FN924-S Single Base Substitution G-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2138-S.SNP.5:21308295 chr05:021308295 0 W/21308295-21308295 FN2138-S SNP C -> T AC=1;AN=168;BQB=0.547024;DP=3959;DP4=1803,2052,22,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.50762e-18;MQSB=0.979133;RPB=0.258366;SGB=-187.163;VDB=0.086922;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.5:21310048 chr05:021310048 0 W/21310048-21310048 FN-121 Single Base Substitution T-C INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-274.SNP.5:21312318 chr05:021312318 0 W/21312318-21312318 FN-274 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g35960 expressed protein SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. 706-1.SNP.5:21322554 chr05:021322554 0 W/21322554-21322554 706-1 Single Base Substitution T-A INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. W706-3-1.SNP.5:21322554 chr05:021322554 0 W/21322554-21322554 W706-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3764-S.SNP.5:21331330 chr05:021331330 0 W/21331330-21331330 FN3764-S SNP C -> T AC=2;AN=190;BQB=0.976748;DP=2911;DP4=1379,1428,7,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.20602e-13;MQSB=0.786297;RPB=0.686559;SGB=85.5263;VDB=0.633915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.5:21331331 chr05:021331331 0 W/21331331-21331331 FN3764-S SNP A -> T AC=2;AN=190;BQB=0.954369;DP=2929;DP4=1379,1425,7,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86039e-13;MQSB=0.802441;RPB=0.739709;SGB=60.9777;VDB=0.82629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.5:21332272 chr05:021332272 0 W/21332272-21332272 FN2674-S SNP C -> T AC=2;AN=200;BQB=0.906358;DP=4644;DP4=2291,2074,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.15354e-26;MQSB=0.996613;RPB=0.304188;SGB=148.425;VDB=0.388363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.5:21334299 chr05:021334299 0 W/21334299-21334299 FN3833-S SNP A -> T AC=1;AN=190;BQB=0.992623;DP=2574;DP4=1255,1224,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80067e-05;MQSB=0.723913;RPB=0.147355;SGB=39.9877;VDB=0.00875562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.5:21335322 chr05:021335322 0 W/21335322-21335322 FN2181-S SNP A -> G AC=1;AN=190;BQB=0.999434;DP=4095;DP4=1717,1752,32,68;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00830281;MQB=0;MQSB=1.56959e-05;RPB=1.81055e-17;SGB=-1065.18;VDB=5.01343e-06;EFF=INTRON(MODIFIER||||142|LOC_Os05g36030|protein_coding|CODING|LOC_Os05g36030.1|1|1) FN2181-S.SNP.5:21335333 chr05:021335333 0 W/21335333-21335333 FN2181-S SNP C -> G AC=1;AN=190;BQB=0.994282;DP=4079;DP4=1782,1962,25,37;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0029419;MQB=5.61561e-39;MQSB=0.000104164;RPB=3.657e-10;SGB=-676.449;VDB=0.000531477;EFF=INTRON(MODIFIER||||142|LOC_Os05g36030|protein_coding|CODING|LOC_Os05g36030.1|1|1) FN2279-S.SNP.5:21336043 chr05:021336043 0 W/21336043-21336043 FN2279-S SNP T -> C AC=2;AN=190;BQB=0.499702;DP=4489;DP4=1596,2270,28,31;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0006683;MQB=9.93833e-22;MQSB=0.248572;RPB=0.992703;SGB=199.579;VDB=0.736026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.5:21338325 chr05:021338325 0 W/21338325-21338325 FN2216-S SNP G -> C AC=1;AN=190;BQB=0.441015;DP=7016;DP4=2408,4181,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.179162;MQB=0.332759;MQSB=0;RPB=0.999027;SGB=60.9777;VDB=0.0975148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E417D|719|LOC_Os05g36040|protein_coding|CODING|LOC_Os05g36040.1|2|1) CW-631-3-1.SNP.5:21345576 chr05:021345576 0 W/21345576-21345576 CW-631-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1700-S.SNP.5:21348813 chr05:021348813 0 W/21348813-21348813 FN1700-S SNP C -> A AC=1;AN=188;BQB=0.00474741;DP=4155;DP4=2186,1936,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.56993e-05;MQSB=0.136205;RPB=0.813976;SGB=-81.5271;VDB=0.911388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.5:21351139 chr05:021351139 0 W/21351139-21351139 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.97842;DP=2968;DP4=846,2085,2,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.85185e-09;MQSB=0.922475;RPB=0.0856632;SGB=31.908;VDB=0.570435;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.5:21351356 chr05:021351356 0 W/21351356-21351356 FN-115 Single Base Substitution C-T INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1711-S.SNP.5:21351688 chr05:021351688 0 W/21351688-21351688 FN1711-S SNP C -> T AC=1;AN=188;BQB=0.0383887;DP=2585;DP4=1889,658,17,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65594e-05;MQSB=0.982773;RPB=0.997307;SGB=-88.8972;VDB=0.857073;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.5:21360760 chr05:021360760 0 W/21360760-21360760 FN927-S Single Base Substitution T-A INTRON HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN975-S.SNP.5:21364146 chr05:021364146 0 W/21364146-21364146 FN975-S Single Base Substitution G-A INTERGENIC HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1319-S.SNP.5:21376227 chr05:021376227 0 W/21376227-21376227 FN1319-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g36070 signal peptide peptidase domain containing protein, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN3828-S.SNP.5:21377421 chr05:021377421 0 W/21377421-21377421 FN3828-S SNP G -> A AC=1;AN=190;BQB=0.824956;DP=2362;DP4=868,1381,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.10899e-09;MQSB=0.787238;RPB=0.980794;SGB=58.2031;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.5:21378018 chr05:021378018 0 W/21378018-21378018 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.77574;DP=4411;DP4=2062,2133,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5712e-11;MQSB=0.97231;RPB=0.774817;SGB=69.1109;VDB=0.864059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V33I|483|LOC_Os05g36080|protein_coding|CODING|LOC_Os05g36080.1|1|1) FN1117-S.SNP.5:21384404 chr05:021384404 0 W/21384404-21384404 FN1117-S Single Base Substitution G-T INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3801-S.SNP.5:21401903 chr05:021401903 0 W/21401903-21401903 FN3801-S SNP C -> T AC=1;AN=190;BQB=0.980513;DP=2361;DP4=1146,1140,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.39909e-07;MQSB=0.999787;RPB=0.995279;SGB=39.9877;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.5:21403205 chr05:021403205 0 W/21403205-21403205 FN3809-S SNP A -> G AC=1;AN=190;BQB=0.670627;DP=2563;DP4=1232,1242,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000171619;MQSB=0.999521;RPB=0.995225;SGB=18.3316;VDB=0.954906;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.5:21405243 chr05:021405243 0 W/21405243-21405243 FN734-S Single Base Substitution A-G INTRON HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN_807-3-1.SNP.5:21405771 chr05:021405771 0 W/21405771-21405771 FN_807-3-1 Single Base Substitution G-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1036-S.SNP.5:21423384 chr05:021423384 0 W/21423384-21423384 FN1036-S Single Base Substitution C-T INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN2739-S.SNP.5:21428703 chr05:021428703 0 W/21428703-21428703 FN2739-S SNP G -> C AC=1;AN=200;BQB=0.929064;DP=4758;DP4=2464,2082,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.51088e-15;MQSB=0.962632;RPB=0.999604;SGB=76.3213;VDB=0.838785;EFF=INTRON(MODIFIER||||279|LOC_Os05g36150|protein_coding|CODING|LOC_Os05g36150.1|1|1) FN475-S.SNP.5:21433651 chr05:021433651 0 W/21433651-21433651 FN475-S Single Base Substitution A-C INTRON HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN4234-S.SNP.5:21438407 chr05:021438407 0 W/21438407-21438407 FN4234-S SNP C -> G AC=1;AN=170;BQB=0.927746;DP=2324;DP4=1105,1144,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=30;MQ0F=0.186747;MQB=0.414682;MQSB=0;RPB=0.61508;SGB=34.5445;VDB=0.272032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.5:21445796 chr05:021445796 0 W/21445796-21445796 FN1327-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g36180 retrotransposon protein, putative, unclassified, expressed SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN-151.SNP.5:21457522 chr05:021457522 0 W/21457522-21457522 FN-151 Single Base Substitution C-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1094-S.SNP.5:21460785 chr05:021460785 0 W/21460785-21460785 FN1094-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g36190 OsFBT7 - F-box and tubby domain containing protein, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1680-S.SNP.5:21463281 chr05:021463281 0 W/21463281-21463281 FN1680-S SNP T -> G AC=1;AN=188;BQB=0.999511;DP=2804;DP4=1342,1417,2,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.34903e-08;MQSB=0.67486;RPB=0.987654;SGB=39.5276;VDB=0.154594;EFF=UTR_5_PRIME(MODIFIER||797||445|LOC_Os05g36190|protein_coding|CODING|LOC_Os05g36190.1|1|1) FN1097-S.SNP.5:21466704 chr05:021466704 0 W/21466704-21466704 FN1097-S Single Base Substitution T-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2653-S.SNP.5:21467334 chr05:021467334 0 W/21467334-21467334 FN2653-S SNP G -> T AC=1;AN=200;BQB=0.985624;DP=4957;DP4=2237,2459,12,8;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0125076;MQB=0.0897557;MQSB=0.986823;RPB=0.774203;SGB=37.3004;VDB=0.705871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R45L|465|LOC_Os05g36200|protein_coding|CODING|LOC_Os05g36200.1|3|1) FN2715-S.SNP.5:21468185 chr05:021468185 0 W/21468185-21468185 FN2715-S SNP A -> G AC=1;AN=200;BQB=0.903254;DP=4818;DP4=2431,2174,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00145288;MQB=7.58348e-09;MQSB=0.897555;RPB=0.439688;SGB=9.48993;VDB=0.447322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T254A|465|LOC_Os05g36200|protein_coding|CODING|LOC_Os05g36200.1|4|1) FN1406-S.SNP.5:21470878 chr05:021470878 0 W/21470878-21470878 FN1406-S Single Base Substitution G-A INTERGENIC Homo SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1118-S.SNP.5:21472089 chr05:021472089 0 W/21472089-21472089 FN1118-S Single Base Substitution A-G INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN3576-S.SNP.5:21473821 chr05:021473821 0 W/21473821-21473821 FN3576-S SNP C -> A AC=1;AN=188;BQB=0.742474;DP=2997;DP4=1359,1566,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.3755e-11;MQSB=0.692124;RPB=0.967456;SGB=33.7061;VDB=0.861742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.5:21477492 chr05:021477492 0 W/21477492-21477492 FN3732-S SNP G -> T AC=2;AN=190;BQB=0.868146;DP=2485;DP4=1176,1192,10,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93949e-10;MQSB=0.826093;RPB=0.0626145;SGB=71.8647;VDB=0.150976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.5:21483279 chr05:021483279 0 W/21483279-21483279 FN2089-S SNP A -> T AC=1;AN=168;BQB=0.0210252;DP=3463;DP4=1789,1635,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.246607;MQB=0.990856;MQSB=0;RPB=0.981355;SGB=-40.0741;VDB=0.912355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E270V|449|LOC_Os05g36240|protein_coding|CODING|LOC_Os05g36240.1|3|1) FN2161-S.SNP.5:21486229 chr05:021486229 0 W/21486229-21486229 FN2161-S SNP G -> T AC=1;AN=168;BQB=0.102575;DP=4035;DP4=2092,1908,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000635311;MQSB=0.997945;RPB=0.805825;SGB=-36.0898;VDB=0.723986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.5:21493063 chr05:021493063 0 W/21493063-21493063 FN3499-S SNP A -> G AC=1;AN=188;BQB=0.948197;DP=2489;DP4=943,1473,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.34514e-05;MQSB=0.712428;RPB=0.825724;SGB=39.8925;VDB=0.86321;EFF=INTRON(MODIFIER||||224|LOC_Os05g36260|protein_coding|CODING|LOC_Os05g36260.1|5|1) FN1153-S.SNP.5:21496929 chr05:021496929 0 W/21496929-21496929 FN1153-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1022-S.SNP.5:21506239 chr05:021506239 0 W/21506239-21506239 FN1022-S Single Base Substitution C-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2310.SNP.5:21511724 chr05:021511724 0 W/21511724-21511724 FN2310 SNP G -> T AC=1;AN=192;BQB=0.860854;DP=4420;DP4=2084,2091,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.01419e-14;MQSB=0.832452;RPB=0.894099;SGB=27.6913;VDB=0.542946;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.5:21516761 chr05:021516761 0 W/21516761-21516761 FN899-S Single Base Substitution C-A INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3388-S.SNP.5:21517898 chr05:021517898 0 W/21517898-21517898 FN3388-S SNP T -> A AC=1;AN=184;BQB=0.503997;DP=3432;DP4=1293,1996,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.06538e-05;MQSB=0.989563;RPB=0.996411;SGB=13.188;VDB=0.194065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.5:21520933 chr05:021520933 0 W/21520933-21520933 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.0614503;DP=2418;DP4=1196,1203,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.45429e-05;MQSB=0.968206;RPB=0.178093;SGB=34.4498;VDB=0.609557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.5:21522185 chr05:021522185 0 W/21522185-21522185 FN2674-S SNP C -> G AC=2;AN=200;BQB=0.553996;DP=5146;DP4=2498,2311,30,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.37349e-33;MQSB=0.993689;RPB=0.954812;SGB=256.892;VDB=0.618775;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.5:21526077 chr05:021526077 0 W/21526077-21526077 FN596-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1519-S.SNP.5:21532963 chr05:021532963 0 W/21532963-21532963 FN1519-S Single Base Substitution T-C INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2765-S.SNP.5:21535003 chr05:021535003 0 W/21535003-21535003 FN2765-S SNP G -> T AC=2;AN=198;BQB=0.999701;DP=3276;DP4=1598,1460,22,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00030525;MQB=3.52004e-16;MQSB=0.715092;RPB=0.730451;SGB=150.641;VDB=0.158348;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.5:21535190 chr05:021535190 0 W/21535190-21535190 FN503-S Single Base Substitution G-T INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN1411-S.SNP.5:21538080 chr05:021538080 0 W/21538080-21538080 FN1411-S Single Base Substitution G-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3345-S.SNP.5:21546018 chr05:021546018 0 W/21546018-21546018 FN3345-S SNP A -> G AC=1;AN=184;BQB=0.899406;DP=3804;DP4=1892,1775,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0402208;MQB=0.63305;MQSB=0;RPB=0.967178;SGB=23.2751;VDB=0.388119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.5:21571054 chr05:021571054 0 W/21571054-21571054 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.959068;DP=4152;DP4=1705,2312,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.96172e-13;MQSB=0.979646;RPB=0.973072;SGB=93.9603;VDB=0.879897;EFF=UTR_5_PRIME(MODIFIER||1||442|LOC_Os05g36930|protein_coding|CODING|LOC_Os05g36930.1|2|1),INTRON(MODIFIER||||395|LOC_Os05g36930|protein_coding|CODING|LOC_Os05g36930.2|2|1) FN498-S.SNP.5:21579836 chr05:021579836 0 W/21579836-21579836 FN498-S Single Base Substitution T-C INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1363-S.SNP.5:21584408 chr05:021584408 0 W/21584408-21584408 FN1363-S Single Base Substitution G-C INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1521-S.SNP.5:21590194 chr05:021590194 0 W/21590194-21590194 FN1521-S Single Base Substitution G-A INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3663-S.SNP.5:21594896 chr05:021594896 0 W/21594896-21594896 FN3663-S SNP T -> C AC=1;AN=190;BQB=0.988607;DP=3106;DP4=1489,1452,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12879e-07;MQSB=0.847213;RPB=0.909692;SGB=18.552;VDB=0.220474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.5:21602770 chr05:021602770 0 W/21602770-21602770 FN2119-S SNP C -> T AC=2;AN=168;BQB=0.50658;DP=2281;DP4=1149,1073,16,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.45617e-15;MQSB=0.895746;RPB=0.999558;SGB=25.6529;VDB=0.0112855;EFF=INTRON(MODIFIER||||319|LOC_Os05g36980|protein_coding|CODING|LOC_Os05g36980.1|2|1) FN2119-S.SNP.5:21602772 chr05:021602772 0 W/21602772-21602772 FN2119-S SNP C -> T AC=2;AN=168;BQB=0.452462;DP=2320;DP4=1173,1083,16,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.44034e-15;MQSB=0.871976;RPB=0.997794;SGB=-8.91027;VDB=0.133277;EFF=INTRON(MODIFIER||||319|LOC_Os05g36980|protein_coding|CODING|LOC_Os05g36980.1|2|1) FN-71.SNP.5:21605272 chr05:021605272 0 W/21605272-21605272 FN-71 Single Base Substitution C-T INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3443-S.SNP.5:21605945 chr05:021605945 0 W/21605945-21605945 FN3443-S SNP G -> A AC=1;AN=184;BQB=0.919172;DP=2979;DP4=1480,1404,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00671366;MQB=0.371127;MQSB=0.245346;RPB=0.843794;SGB=62.3078;VDB=0.774801;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.5:21612282 chr05:021612282 0 W/21612282-21612282 FN985-S Single Base Substitution A-T INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN768-S.SNP.5:21613221 chr05:021613221 0 W/21613221-21613221 FN768-S Single Base Substitution G-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN1627-S.SNP.5:21626674 chr05:021626674 0 W/21626674-21626674 FN1627-S Single Base Substitution A-G INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN1071-S.SNP.5:21634112 chr05:021634112 0 W/21634112-21634112 FN1071-S Single Base Substitution A-G INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN500-S.SNP.5:21635002 chr05:021635002 0 W/21635002-21635002 FN500-S Single Base Substitution T-C INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2257-S.SNP.5:21635611 chr05:021635611 0 W/21635611-21635611 FN2257-S SNP C -> T AC=1;AN=190;BQB=0.76815;DP=4199;DP4=1904,2059,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.27343e-14;MQSB=0.836648;RPB=0.702889;SGB=46.6446;VDB=0.674393;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S73|212|LOC_Os05g37020|protein_coding|CODING|LOC_Os05g37020.1|1|1) FN840-S.SNP.5:21636675 chr05:021636675 0 W/21636675-21636675 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN804-S.SNP.5:21643270 chr05:021643270 0 W/21643270-21643270 FN804-S Single Base Substitution G-T INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN864-S.SNP.5:21650806 chr05:021650806 0 W/21650806-21650806 FN864-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2708-S.SNP.5:21652238 chr05:021652238 0 W/21652238-21652238 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.599548;DP=4814;DP4=2398,2162,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.83353e-10;MQSB=0.911319;RPB=0.991583;SGB=45.1159;VDB=0.800101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.5:21653156 chr05:021653156 0 W/21653156-21653156 FN3950-S SNP G -> A AC=1;AN=168;BQB=0.931299;DP=2815;DP4=1482,1224,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.07125e-11;MQSB=0.95216;RPB=0.379395;SGB=72.4869;VDB=0.589323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.5:21653460 chr05:021653460 0 W/21653460-21653460 FN2539-S SNP C -> T AC=2;AN=198;BQB=0.150532;DP=4208;DP4=1988,2010,14,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.00896e-16;MQSB=0.722608;RPB=0.800594;SGB=108.456;VDB=0.0710306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.5:21655560 chr05:021655560 0 W/21655560-21655560 FN2538-S SNP A -> T AC=1;AN=198;BQB=0.372625;DP=3906;DP4=2209,1459,12,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43023e-07;MQSB=0.98348;RPB=0.898959;SGB=-13.8358;VDB=0.391324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.5:21655986 chr05:021655986 0 W/21655986-21655986 FN2260-S SNP T -> C AC=1;AN=190;BQB=0.840462;DP=4676;DP4=2333,2053,15,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74933e-10;MQSB=0.0738669;RPB=0.511212;SGB=41.5369;VDB=0.113174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.5:21656615 chr05:021656615 0 W/21656615-21656615 FN1228-S Single Base Substitution A-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3473-S.SNP.5:21657952 chr05:021657952 0 W/21657952-21657952 FN3473-S SNP T -> A AC=1;AN=184;BQB=0.966507;DP=3021;DP4=1259,1653,15,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.94216e-15;MQSB=0.995932;RPB=0.917271;SGB=78.0093;VDB=0.361947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.5:21660756 chr05:021660756 0 W/21660756-21660756 FN3919-S SNP T -> C AC=1;AN=158;BQB=0.917526;DP=3002;DP4=1376,1521,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=20;MQ0F=0.41006;MQB=0.522534;MQSB=0;RPB=0.974206;SGB=64.5449;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.5:21676294 chr05:021676294 0 W/21676294-21676294 FN1061-S Single Base Substitution G-A INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1610-S.SNP.5:21694181 chr05:021694181 0 W/21694181-21694181 FN1610-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1610-S.SNP.5:21694182 chr05:021694182 0 W/21694182-21694182 FN1610-S Single Base Substitution C-T STOP_GAINED HET LOC_Os05g37120 sec23/Sec24 zinc finger family protein, expressed SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN451-S.SNP.5:21701026 chr05:021701026 0 W/21701026-21701026 FN451-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1057-S.SNP.5:21701263 chr05:021701263 0 W/21701263-21701263 FN1057-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g37130 glycosyl hydrolases family 17, putative, expressed SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3382-S.SNP.5:21705796 chr05:021705796 0 W/21705796-21705796 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.987207;DP=3041;DP4=1509,1414,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07301e-09;MQSB=0.830893;RPB=0.98995;SGB=49.835;VDB=0.297823;EFF=UTR_3_PRIME(MODIFIER||245||148|LOC_Os05g37140|protein_coding|CODING|LOC_Os05g37140.1|1|1),UTR_3_PRIME(MODIFIER||245||148|LOC_Os05g37140|protein_coding|CODING|LOC_Os05g37140.2|2|1) FN3678-S.SNP.5:21708580 chr05:021708580 0 W/21708580-21708580 FN3678-S SNP A -> G AC=1;AN=190;BQB=0.842311;DP=3324;DP4=1597,1567,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65145e-12;MQSB=0.999932;RPB=0.900231;SGB=76.4186;VDB=0.00404137;EFF=UTR_3_PRIME(MODIFIER||289||307|LOC_Os05g37150|protein_coding|CODING|LOC_Os05g37150.2|6|1) FN2440.SNP.5:21725010 chr05:021725010 0 W/21725010-21725010 FN2440 SNP C -> T AC=1;AN=200;BQB=0.828041;DP=4854;DP4=2334,2228,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43419e-05;MQSB=0.948966;RPB=0.353932;SGB=33.0593;VDB=0.758664;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.5:21726087 chr05:021726087 0 W/21726087-21726087 FN523-S Single Base Substitution A-C INTERGENIC HOMO SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.5:21726087 chr05:021726087 0 W/21726087-21726087 FN532-S Single Base Substitution A-C INTERGENIC HOMO SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN_772-3-1.SNP.5:21726940 chr05:021726940 0 W/21726940-21726940 FN_772-3-1 Single Base Substitution C-T HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1134-S.SNP.5:21728288 chr05:021728288 0 W/21728288-21728288 FN1134-S Single Base Substitution G-A INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2094-S.SNP.5:21729448 chr05:021729448 0 W/21729448-21729448 FN2094-S SNP T -> G AC=1;AN=168;BQB=0.0825904;DP=3067;DP4=1408,1612,17,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00228236;MQB=4.75325e-12;MQSB=1.08876e-05;RPB=0.843255;SGB=-46.9043;VDB=0.858243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.5:21731159 chr05:021731159 0 W/21731159-21731159 FN2317 SNP G -> C AC=2;AN=192;BQB=0.987082;DP=4583;DP4=2365,1990,16,13;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000218198;MQB=1.95326e-14;MQSB=0.349842;RPB=0.0687822;SGB=93.2452;VDB=0.236102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R85S|105|LOC_Os05g37180|protein_coding|CODING|LOC_Os05g37180.1|1|1) FN2317.SNP.5:21732040 chr05:021732040 0 W/21732040-21732040 FN2317 SNP C -> T AC=2;AN=192;BQB=0.993332;DP=4979;DP4=3016,1661,30,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.91954e-21;MQSB=0.728121;RPB=0.928804;SGB=-137.337;VDB=0.724823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.5:21732832 chr05:021732832 0 W/21732832-21732832 FN2301 SNP T -> A AC=1;AN=192;BQB=0.585698;DP=5227;DP4=2492,2517,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.47214e-10;MQSB=0.439521;RPB=0.402643;SGB=90.2896;VDB=0.378716;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.5:21733404 chr05:021733404 0 W/21733404-21733404 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2226-S.SNP.5:21735873 chr05:021735873 0 W/21735873-21735873 FN2226-S SNP G -> C AC=1;AN=190;BQB=0.825533;DP=5068;DP4=2439,2308,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197316;MQB=2.14079e-09;MQSB=0.691135;RPB=0.494185;SGB=23.6597;VDB=0.926108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.5:21738511 chr05:021738511 0 W/21738511-21738511 FN-387 Single Base Substitution T-A INTRON HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-8.SNP.5:21739558 chr05:021739558 0 W/21739558-21739558 FN-8 Single Base Substitution C-T UTR_3_PRIME Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN2213-S.SNP.5:21741644 chr05:021741644 0 W/21741644-21741644 FN2213-S SNP C -> A AC=1;AN=190;BQB=0.840425;DP=4985;DP4=2206,2487,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46369e-15;MQSB=0.57983;RPB=0.947889;SGB=82.301;VDB=0.19105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.5:21741859 chr05:021741859 0 W/21741859-21741859 FN3661-S SNP C -> A AC=1;AN=186;BQB=0.955973;DP=3092;DP4=1538,1438,5,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.35209e-07;MQSB=0.936563;RPB=0.974306;SGB=49.0954;VDB=0.0797555;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.5:21765557 chr05:021765557 0 W/21765557-21765557 FN2675-S SNP A -> T AC=1;AN=200;BQB=0.960675;DP=4667;DP4=2044,2411,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74153e-13;MQSB=0.997734;RPB=0.974079;SGB=39.9056;VDB=0.584922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.5:21768905 chr05:021768905 0 W/21768905-21768905 FN1446-S Single Base Substitution C-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN4090-S.SNP.5:21777111 chr05:021777111 0 W/21777111-21777111 FN4090-S SNP G -> A AC=1;AN=182;BQB=0.984715;DP=3242;DP4=1579,1589,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00246761;MQB=5.44384e-08;MQSB=0.99908;RPB=0.345801;SGB=57.644;VDB=0.543455;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q173*|1369|LOC_Os05g37230|protein_coding|CODING|LOC_Os05g37230.1|1|1);LOF=(LOC_Os05g37230|LOC_Os05g37230|1|1.00);NMD=(LOC_Os05g37230|LOC_Os05g37230|1|1.00) FN924-S.SNP.5:21784523 chr05:021784523 0 W/21784523-21784523 FN924-S Single Base Substitution C-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3757-S.SNP.5:21787163 chr05:021787163 0 W/21787163-21787163 FN3757-S SNP A -> G AC=1;AN=190;BQB=0.953872;DP=2374;DP4=814,1431,2,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00084246;MQB=1.6975e-09;MQSB=0.0722796;RPB=0.741688;SGB=71.8647;VDB=0.852751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.5:21789750 chr05:021789750 0 W/21789750-21789750 FN2326 SNP G -> A AC=2;AN=192;BQB=0.226491;DP=5324;DP4=2630,2351,26,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.01035e-25;MQSB=0.957123;RPB=0.755527;SGB=4.98351;VDB=0.264019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.5:21794397 chr05:021794397 0 W/21794397-21794397 FN2272-S SNP C -> T AC=2;AN=190;BQB=0.999283;DP=5253;DP4=2530,2206,40,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.62739e-39;MQSB=0.772453;RPB=0.610929;SGB=210.422;VDB=0.266326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.5:21797374 chr05:021797374 0 W/21797374-21797374 FN2789-S SNP A -> G AC=1;AN=198;BQB=0.774916;DP=4017;DP4=1866,1786,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.40291e-11;MQSB=0.970407;RPB=0.935771;SGB=54.5295;VDB=0.803347;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.5:21807705 chr05:021807705 0 W/21807705-21807705 FN4149-S SNP C -> G AC=2;AN=170;BQB=0.999976;DP=3043;DP4=1460,1494,17,7;HOB=0.0232526;ICB=0.494188;MQ=18;MQ0F=0.396319;MQB=0.0305905;MQSB=0;RPB=0.86371;SGB=101.184;VDB=0.195328;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S514|2027|LOC_Os05g37270|protein_coding|CODING|LOC_Os05g37270.1|1|1) FN1513-S.SNP.5:21809121 chr05:021809121 0 W/21809121-21809121 FN1513-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g37270 retrotransposon protein, putative, unclassified, expressed SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2333.SNP.5:21813244 chr05:021813244 0 W/21813244-21813244 FN2333 SNP A -> C AC=1;AN=192;BQB=0.874087;DP=5326;DP4=2165,2535,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0555764;MQB=0.91425;MQSB=0;RPB=0.771161;SGB=46.8644;VDB=0.47022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Gcc|S939A|1030|LOC_Os05g37280|protein_coding|CODING|LOC_Os05g37280.1|2|1) FN4153-S.SNP.5:21813334 chr05:021813334 0 W/21813334-21813334 FN4153-S SNP C -> A AC=2;AN=170;BQB=0.978596;DP=2340;DP4=949,1316,13,11;HOB=0.0232526;ICB=0.494188;MQ=26;MQ0F=0.194872;MQB=0.996228;MQSB=1.19529e-19;RPB=0.32772;SGB=101.184;VDB=0.398441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A909S|1030|LOC_Os05g37280|protein_coding|CODING|LOC_Os05g37280.1|2|1) FN3763-S.SNP.5:21814162 chr05:021814162 0 W/21814162-21814162 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.936415;DP=2763;DP4=1324,1361,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0622512;MQB=0.125268;MQSB=3.27797e-08;RPB=0.611907;SGB=18.3316;VDB=0.308129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D633N|1030|LOC_Os05g37280|protein_coding|CODING|LOC_Os05g37280.1|2|1) FN3599-S.SNP.5:21823612 chr05:021823612 0 W/21823612-21823612 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.824952;DP=3747;DP4=1715,1946,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.112357;MQB=0.818219;MQSB=0;RPB=0.325944;SGB=89.8686;VDB=0.59151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.5:21823940 chr05:021823940 0 W/21823940-21823940 FN3867-S SNP G -> C AC=1;AN=158;BQB=0.849555;DP=2964;DP4=1556,1295,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0151822;MQB=0.315739;MQSB=1.13954e-21;RPB=0.651319;SGB=42.6978;VDB=0.424842;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L1040|1069|LOC_Os05g37300|protein_coding|CODING|LOC_Os05g37300.1|2|1) FN322-S.SNP.5:21824988 chr05:021824988 0 W/21824988-21824988 FN322-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g37300 retrotransposon protein, putative, unclassified, expressed SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN1106-S.SNP.5:21825355 chr05:021825355 0 W/21825355-21825355 FN1106-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g37300 retrotransposon protein, putative, unclassified, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3966-S.SNP.5:21826308 chr05:021826308 0 W/21826308-21826308 FN3966-S SNP G -> A AC=1;AN=168;BQB=0.499541;DP=2967;DP4=1493,1381,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0633637;MQB=0.860483;MQSB=0.984578;RPB=0.995666;SGB=38.8805;VDB=0.567012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L284F|1069|LOC_Os05g37300|protein_coding|CODING|LOC_Os05g37300.1|1|1) FN1423-S.SNP.5:21828771 chr05:021828771 0 W/21828771-21828771 FN1423-S Single Base Substitution G-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN523-S.SNP.5:21832939 chr05:021832939 0 W/21832939-21832939 FN523-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.5:21832939 chr05:021832939 0 W/21832939-21832939 FN532-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2084-S.SNP.5:21856587 chr05:021856587 0 W/21856587-21856587 FN2084-S SNP A -> T AC=1;AN=168;BQB=0.974006;DP=2967;DP4=1623,1289,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66997e-10;MQSB=0.995323;RPB=0.887821;SGB=12.7756;VDB=0.18298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.5:21856773 chr05:021856773 0 W/21856773-21856773 FN1047-S Single Base Substitution C-A INTERGENIC HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2582-S.SNP.5:21862905 chr05:021862905 0 W/21862905-21862905 FN2582-S SNP G -> T AC=1;AN=198;BQB=0.624072;DP=3975;DP4=1813,1982,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.10717;MQB=0.78295;MQSB=0;RPB=0.232402;SGB=11.1786;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.5:21868667 chr05:021868667 0 W/21868667-21868667 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.494743;DP=4541;DP4=2011,2273,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00264259;MQB=0.000258145;MQSB=0.806935;RPB=0.400611;SGB=36.1006;VDB=0.136145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A944V|1992|LOC_Os05g37380|protein_coding|CODING|LOC_Os05g37380.1|3|1) FN2163-S.SNP.5:21870042 chr05:021870042 0 W/21870042-21870042 FN2163-S SNP G -> A AC=1;AN=168;BQB=0.995839;DP=2556;DP4=1439,1083,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.0974178;MQB=0.527748;MQSB=2.83581e-34;RPB=0.974863;SGB=19.7539;VDB=0.689778;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q510*|1992|LOC_Os05g37380|protein_coding|CODING|LOC_Os05g37380.1|2|1);LOF=(LOC_Os05g37380|LOC_Os05g37380|1|1.00);NMD=(LOC_Os05g37380|LOC_Os05g37380|1|1.00) FN2362.SNP.5:21875155 chr05:021875155 0 W/21875155-21875155 FN2362 SNP A -> T AC=1;AN=192;BQB=0.801875;DP=4527;DP4=2613,1543,7,3;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=6.90087e-06;MQSB=0.0877288;RPB=0.761919;SGB=-3.59558;VDB=0.57381;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.5:21876949 chr05:021876949 0 W/21876949-21876949 FN1273-S Single Base Substitution C-T INTRON HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1273-S.SNP.5:21876963 chr05:021876963 0 W/21876963-21876963 FN1273-S Single Base Substitution A-T INTRON HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN_814-7-1.SNP.5:21890010 chr05:021890010 0 W/21890010-21890010 FN_814-7-1 Single Base Substitution A-G Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2465.SNP.5:21890109 chr05:021890109 0 W/21890109-21890109 FN2465 SNP A -> T AC=1;AN=200;BQB=0.626623;DP=5413;DP4=2522,2509,19,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00166266;MQB=8.72378e-15;MQSB=0.798243;RPB=0.912059;SGB=86.7987;VDB=0.159243;EFF=SPLICE_SITE_REGION(LOW||||1829|LOC_Os05g37410|protein_coding|CODING|LOC_Os05g37410.1|11|1),INTRON(MODIFIER||||1829|LOC_Os05g37410|protein_coding|CODING|LOC_Os05g37410.1|11|1) FN1615-S.SNP.5:21897131 chr05:021897131 0 W/21897131-21897131 FN1615-S Single Base Substitution G-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1493-S.SNP.5:21897193 chr05:021897193 0 W/21897193-21897193 FN1493-S Single Base Substitution A-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2146-S.SNP.5:21899104 chr05:021899104 0 W/21899104-21899104 FN2146-S SNP T -> A AC=1;AN=168;BQB=0.371146;DP=2929;DP4=1423,1477,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50359e-07;MQSB=0.989133;RPB=0.0536633;SGB=24.6155;VDB=0.0821612;EFF=INTRON(MODIFIER||||140|LOC_Os05g37420|protein_coding|CODING|LOC_Os05g37420.1|1|1) FN4224-S.SNP.5:21900524 chr05:021900524 0 W/21900524-21900524 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.855729;DP=2656;DP4=1333,1212,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.69566e-08;MQSB=0.991519;RPB=0.899788;SGB=19.8839;VDB=0.523781;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.5:21904530 chr05:021904530 0 W/21904530-21904530 FN4116-S SNP T -> A AC=2;AN=182;BQB=0.994205;DP=2902;DP4=1325,1503,8,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.83014e-11;MQSB=0.96165;RPB=0.732613;SGB=80.1982;VDB=0.58802;EFF=INTRON(MODIFIER||||644|LOC_Os05g37434|protein_coding|CODING|LOC_Os05g37434.1|4|1) FN1519-S.SNP.5:21905254 chr05:021905254 0 W/21905254-21905254 FN1519-S Single Base Substitution T-G NON_SYNONYMOUS_CODING Homo LOC_Os05g37434 arginyl-tRNA--protein transferase 1, putative, expressed SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN756-S.SNP.5:21916909 chr05:021916909 0 W/21916909-21916909 FN756-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g37450 starch binding domain containing protein, putative, expressed SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2276-S.SNP.5:21918763 chr05:021918763 0 W/21918763-21918763 FN2276-S SNP C -> T AC=1;AN=190;BQB=0.984184;DP=4897;DP4=2070,2398,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204207;MQB=2.0083e-08;MQSB=0.995773;RPB=0.433788;SGB=-35.8783;VDB=0.352644;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.5:21918842 chr05:021918842 0 W/21918842-21918842 FN1527-S Single Base Substitution G-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-281.SNP.5:21921896 chr05:021921896 0 W/21921896-21921896 FN-281 Single Base Substitution A-G INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-124.SNP.5:21921954 chr05:021921954 0 W/21921954-21921954 FN-124 Single Base Substitution A-G INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2092-S.SNP.5:21922365 chr05:021922365 0 W/21922365-21922365 FN2092-S SNP T -> C AC=1;AN=168;BQB=0.929823;DP=3776;DP4=1745,2002,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.32807e-07;MQSB=0.943047;RPB=0.311591;SGB=-17.0958;VDB=0.198042;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.5:21926901 chr05:021926901 0 W/21926901-21926901 FN409-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1686-S.SNP.5:21929367 chr05:021929367 0 W/21929367-21929367 FN1686-S SNP A -> T AC=2;AN=188;BQB=9.04525e-18;DP=3695;DP4=1916,1731,15,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.34573e-16;MQSB=0.994208;RPB=0.55828;SGB=27.1443;VDB=0.0463238;EFF=INTRON(MODIFIER||||503|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.1|5|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.2|6|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.3|5|1) FN1686-S.SNP.5:21929368 chr05:021929368 0 W/21929368-21929368 FN1686-S SNP A -> T AC=2;AN=188;BQB=1.19959e-16;DP=3693;DP4=1923,1721,16,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.22641e-18;MQSB=0.983059;RPB=0.639165;SGB=27.1443;VDB=0.00369811;EFF=INTRON(MODIFIER||||503|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.1|5|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.2|6|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.3|5|1) FN1686-S.SNP.5:21929379 chr05:021929379 0 W/21929379-21929379 FN1686-S SNP C -> T AC=2;AN=188;BQB=0.830716;DP=3683;DP4=1933,1686,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.64644e-17;MQSB=0.914756;RPB=0.983164;SGB=-5.22045;VDB=0.16394;EFF=INTRON(MODIFIER||||503|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.1|5|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.2|6|1),INTRON(MODIFIER||||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.3|5|1) FN2366.SNP.5:21931707 chr05:021931707 0 W/21931707-21931707 FN2366 SNP A -> T AC=1;AN=192;BQB=0.340435;DP=4936;DP4=2303,1866,9,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.52883e-11;MQSB=0.999302;RPB=0.503862;SGB=-40.12;VDB=0.551179;EFF=UTR_5_PRIME(MODIFIER||198||503|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.1|1|1),UTR_5_PRIME(MODIFIER||198||482|LOC_Os05g37470|protein_coding|CODING|LOC_Os05g37470.2|1|1) FN3906-S.SNP.5:21936310 chr05:021936310 0 W/21936310-21936310 FN3906-S SNP A -> G AC=2;AN=158;BQB=0.956278;DP=2454;DP4=1291,1087,8,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.60969e-10;MQSB=0.989126;RPB=0.972272;SGB=64.5449;VDB=0.915056;EFF=INTRON(MODIFIER||||181|LOC_Os05g37480|protein_coding|CODING|LOC_Os05g37480.1|3|1) FN3494-S.SNP.5:21938540 chr05:021938540 0 W/21938540-21938540 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.981675;DP=2855;DP4=1481,1256,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57333e-05;MQSB=0.864944;RPB=0.476927;SGB=39.699;VDB=0.746049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.5:21939681 chr05:021939681 0 W/21939681-21939681 FN1112-S Single Base Substitution G-A INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3777-S.SNP.5:21939681 chr05:021939681 0 W/21939681-21939681 FN3777-S SNP G -> A AC=2;AN=190;BQB=0.989768;DP=2310;DP4=988,1228,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15712e-12;MQSB=0.918547;RPB=0.931972;SGB=103.742;VDB=0.213712;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.5:21940770 chr05:021940770 0 W/21940770-21940770 FN3354-S SNP T -> A AC=1;AN=184;BQB=0.91476;DP=3216;DP4=1654,1495,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.74179e-08;MQSB=0.685157;RPB=0.956328;SGB=32.2261;VDB=0.552793;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.5:21951982 chr05:021951982 0 W/21951982-21951982 FN1521-S Single Base Substitution A-T INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2439.SNP.5:21955172 chr05:021955172 0 W/21955172-21955172 FN2439 SNP C -> T AC=1;AN=200;BQB=0.957847;DP=4982;DP4=2295,2242,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24547e-05;MQSB=0.572791;RPB=0.840979;SGB=11.2488;VDB=0.546508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R310Q|2055|LOC_Os05g37500|protein_coding|CODING|LOC_Os05g37500.1|8|1),SPLICE_SITE_REGION(LOW||||2055|LOC_Os05g37500|protein_coding|CODING|LOC_Os05g37500.1|8|1) FN3050-S.SNP.5:21968534 chr05:021968534 0 W/21968534-21968534 FN3050-S SNP G -> A AC=2;AN=184;BQB=0.498557;DP=2652;DP4=1150,1336,9,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.44191e-12;MQSB=0.99786;RPB=0.943387;SGB=-8.97434;VDB=0.55112;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.5:21971406 chr05:021971406 0 W/21971406-21971406 FN-223 Single Base Substitution C-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN1549-S.SNP.5:21972921 chr05:021972921 0 W/21972921-21972921 FN1549-S Single Base Substitution A-G INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2645-S.SNP.5:21974431 chr05:021974431 0 W/21974431-21974431 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.969988;DP=3042;DP4=2136,666,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.04165e-11;MQSB=0.384429;RPB=0.994866;SGB=58.2954;VDB=0.869391;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.5:21989557 chr05:021989557 0 W/21989557-21989557 FN_814-7-1 Single Base Substitution A-G Homo LOC_Os05g37580 retrotransposon protein, putative, unclassified, expressed SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2593-S.SNP.5:22003789 chr05:022003789 0 W/22003789-22003789 FN2593-S SNP A -> C AC=2;AN=198;BQB=0.964956;DP=2808;DP4=1106,904,13,31;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=6.17086e-17;MQSB=0.972835;RPB=0.469818;SGB=-19.2564;VDB=0.10187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.5:22004796 chr05:022004796 0 W/22004796-22004796 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.893852;DP=2662;DP4=1339,1249,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87265e-13;MQSB=0.91767;RPB=0.769001;SGB=46.4929;VDB=0.587569;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.5:22012289 chr05:022012289 0 W/22012289-22012289 FN590-S Single Base Substitution G-C INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1213-S.SNP.5:22013302 chr05:022013302 0 W/22013302-22013302 FN1213-S Single Base Substitution G-C INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN901-S.SNP.5:22022685 chr05:022022685 0 W/22022685-22022685 FN901-S Single Base Substitution A-G INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1188-S.SNP.5:22030455 chr05:022030455 0 W/22030455-22030455 FN1188-S Single Base Substitution T-C INTRON HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN-142.SNP.5:22032061 chr05:022032061 0 W/22032061-22032061 FN-142 Single Base Substitution A-G INTERGENIC HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3524-S.SNP.5:22032778 chr05:022032778 0 W/22032778-22032778 FN3524-S SNP C -> T AC=1;AN=188;BQB=0.644115;DP=2468;DP4=1495,795,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000578102;MQSB=0.00365439;RPB=0.873971;SGB=15.903;VDB=0.00414998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.5:22039154 chr05:022039154 0 W/22039154-22039154 FN1322-S Single Base Substitution G-T INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3951-S.SNP.5:22043176 chr05:022043176 0 W/22043176-22043176 FN3951-S SNP G -> A AC=1;AN=168;BQB=0.907903;DP=2520;DP4=908,1546,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.58203e-07;MQSB=0.980079;RPB=0.997494;SGB=2.75988;VDB=0.532362;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.5:22054368 chr05:022054368 0 W/22054368-22054368 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.980437;DP=4200;DP4=1941,2042,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238095;MQB=6.43486e-11;MQSB=0.644613;RPB=0.727021;SGB=50.9344;VDB=0.715932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.5:22057412 chr05:022057412 0 W/22057412-22057412 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1023-S.SNP.5:22057414 chr05:022057414 0 W/22057414-22057414 FN1023-S Single Base Substitution C-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN4098-S.SNP.5:22072005 chr05:022072005 0 W/22072005-22072005 FN4098-S SNP C -> T AC=1;AN=182;BQB=0.94566;DP=2860;DP4=1345,1446,8,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.30088e-11;MQSB=0.175198;RPB=0.340622;SGB=84.7091;VDB=0.0343724;EFF=UTR_3_PRIME(MODIFIER||1996||318|LOC_Os05g37700|protein_coding|CODING|LOC_Os05g37700.2|8|1),UTR_3_PRIME(MODIFIER||480||606|LOC_Os05g37700|protein_coding|CODING|LOC_Os05g37700.1|8|1) FN3710-S.SNP.5:22076579 chr05:022076579 0 W/22076579-22076579 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.626119;DP=2851;DP4=1192,1448,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.26354e-05;MQSB=0.996971;RPB=0.102824;SGB=-2.10437;VDB=0.0538447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.5:22076862 chr05:022076862 0 W/22076862-22076862 FN2181-S SNP T -> C AC=2;AN=190;BQB=0.909121;DP=4488;DP4=2109,2003,20,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.80256e-22;MQSB=0.136808;RPB=0.897277;SGB=142.717;VDB=0.593626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I254V|291|LOC_Os05g37720|protein_coding|CODING|LOC_Os05g37720.1|4|1) FN1622-S.SNP.5:22078482 chr05:022078482 0 W/22078482-22078482 FN1622-S Single Base Substitution C-T INTRON HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2670-S.SNP.5:22083490 chr05:022083490 0 W/22083490-22083490 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.907834;DP=4411;DP4=2092,2087,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.96066e-10;MQSB=0.982192;RPB=0.885342;SGB=91.1059;VDB=0.738699;EFF=UTR_5_PRIME(MODIFIER||418||315|LOC_Os05g37730|protein_coding|CODING|LOC_Os05g37730.1|1|1) FN2625-S.SNP.5:22084246 chr05:022084246 0 W/22084246-22084246 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.986445;DP=4723;DP4=2181,2180,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021173;MQB=2.93935e-17;MQSB=0.683994;RPB=0.140666;SGB=-41.238;VDB=0.290555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.5:22096465 chr05:022096465 0 W/22096465-22096465 FN1585-S Single Base Substitution C-A INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN4151-S.SNP.5:22096465 chr05:022096465 0 W/22096465-22096465 FN4151-S SNP C -> A AC=1;AN=170;BQB=0.857542;DP=2389;DP4=1124,1173,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.31211e-09;MQSB=0.575573;RPB=0.892778;SGB=56.7575;VDB=0.289747;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.5:22097361 chr05:022097361 0 W/22097361-22097361 W453-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN1240-S.SNP.5:22098885 chr05:022098885 0 W/22098885-22098885 FN1240-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN429-S.SNP.5:22099348 chr05:022099348 0 W/22099348-22099348 FN429-S Single Base Substitution T-G INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3885-S.SNP.5:22103171 chr05:022103171 0 W/22103171-22103171 FN3885-S SNP G -> T AC=1;AN=158;BQB=0.49965;DP=4165;DP4=2008,1871,24,11;HOB=8.01154e-05;ICB=0.000161245;MQ=17;MQ0F=0.357743;MQB=0.590388;MQSB=0;RPB=0.962142;SGB=147.564;VDB=0.612427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.5:22124592 chr05:022124592 0 W/22124592-22124592 FN3743-S SNP A -> C AC=2;AN=190;BQB=0.710067;DP=2638;DP4=1141,1388,18,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.62639e-17;MQSB=0.999706;RPB=0.991816;SGB=110.732;VDB=0.627125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.5:22135266 chr05:022135266 0 W/22135266-22135266 FN3817-S SNP G -> A AC=1;AN=190;BQB=0.889278;DP=2871;DP4=1245,1470,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19904e-09;MQSB=0.773402;RPB=0.783552;SGB=67.3108;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.5:22136348 chr05:022136348 0 W/22136348-22136348 FN-375 Single Base Substitution C-T INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-38.SNP.5:22136622 chr05:022136622 0 W/22136622-22136622 FN-38 Single Base Substitution T-C INTERGENIC Homo SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN-193.SNP.5:22145866 chr05:022145866 0 W/22145866-22145866 FN-193 Single Base Substitution A-G INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2472.SNP.5:22145949 chr05:022145949 0 W/22145949-22145949 FN2472 SNP A -> T AC=2;AN=200;BQB=0.997706;DP=5086;DP4=2511,2193,28,40;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.6783e-39;MQSB=0.922907;RPB=0.421861;SGB=162.349;VDB=0.158281;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.5:22158424 chr05:022158424 0 W/22158424-22158424 FN-92 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g37820 transporter, major facilitator family, putative, expressed SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1633-S.SNP.5:22168340 chr05:022168340 0 W/22168340-22168340 FN1633-S Single Base Substitution C-G INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2204-S.SNP.5:22168581 chr05:022168581 0 W/22168581-22168581 FN2204-S SNP G -> T AC=1;AN=190;BQB=0.909567;DP=8422;DP4=3871,3458,20,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000474947;MQB=3.16342e-07;MQSB=0;RPB=0.993562;SGB=69.6295;VDB=0.548457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.5:22168581 chr05:022168581 0 W/22168581-22168581 FN3652-S SNP G -> A AC=1;AN=190;BQB=0.965948;DP=4593;DP4=1833,2341,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.07429e-05;MQSB=0;RPB=0.0876823;SGB=36.1006;VDB=0.203023;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.5:22175969 chr05:022175969 0 W/22175969-22175969 FN3452-S SNP A -> G AC=2;AN=184;BQB=0.998989;DP=2591;DP4=1289,1127,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.9285e-15;MQSB=0.912936;RPB=0.999869;SGB=88.5747;VDB=0.0333632;EFF=INTRON(MODIFIER||||202|LOC_Os05g37860|protein_coding|CODING|LOC_Os05g37860.1|1|1) FN3824-S.SNP.5:22180755 chr05:022180755 0 W/22180755-22180755 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.779145;DP=2563;DP4=1283,1208,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.63809e-05;MQSB=0.631323;RPB=0.985849;SGB=18.3316;VDB=0.598931;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V168|507|LOC_Os05g37870|protein_coding|CODING|LOC_Os05g37870.1|1|1) FN1349-S.SNP.5:22190800 chr05:022190800 0 W/22190800-22190800 FN1349-S Single Base Substitution T-A INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN2245-S.SNP.5:22193010 chr05:022193010 0 W/22193010-22193010 FN2245-S SNP G -> A AC=1;AN=190;BQB=0.983517;DP=4749;DP4=2608,1883,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.81583e-06;MQSB=0.895168;RPB=0.0621176;SGB=13.4442;VDB=0.182174;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.5:22194348 chr05:022194348 0 W/22194348-22194348 FN-410 Single Base Substitution A-G INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN1751-S.SNP.5:22195224 chr05:022195224 0 W/22195224-22195224 FN1751-S SNP T -> G AC=2;AN=188;BQB=0.340633;DP=4107;DP4=1994,2046,34,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.349e-26;MQSB=0.992062;RPB=0.998366;SGB=122.721;VDB=0.559451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.5:22203389 chr05:022203389 0 W/22203389-22203389 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.651371;DP=2876;DP4=1306,1508,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.28396e-05;MQSB=0.977176;RPB=0.578556;SGB=35.1773;VDB=0.712841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.5:22207327 chr05:022207327 0 W/22207327-22207327 FN3677-S SNP A -> T AC=1;AN=190;BQB=0.866937;DP=3278;DP4=1578,1552,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72267e-09;MQSB=0.913393;RPB=0.617783;SGB=39.6545;VDB=0.519837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.5:22207873 chr05:022207873 0 W/22207873-22207873 FN2107-S SNP T -> A AC=1;AN=168;BQB=0.211843;DP=4301;DP4=2236,2019,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.47586e-12;MQSB=0.929038;RPB=0.564731;SGB=17.068;VDB=0.43818;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.5:22213657 chr05:022213657 0 W/22213657-22213657 FN449-S Single Base Substitution G-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN579-S.SNP.5:22217573 chr05:022217573 0 W/22217573-22217573 FN579-S Single Base Substitution T-C INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN3520-S.SNP.5:22222330 chr05:022222330 0 W/22222330-22222330 FN3520-S SNP A -> T AC=2;AN=188;BQB=0.607628;DP=2741;DP4=1086,1578,16,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.24967e-16;MQSB=0.702311;RPB=0.747609;SGB=74.3988;VDB=0.429414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.5:22222330 chr05:022222330 0 W/22222330-22222330 FN3761-S SNP A -> T AC=1;AN=190;BQB=0.831577;DP=2804;DP4=1150,1577,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.53082e-09;MQSB=0.52006;RPB=0.703291;SGB=8.77275;VDB=0.524259;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.5:22225345 chr05:022225345 0 W/22225345-22225345 FN2140-S SNP C -> A AC=1;AN=168;BQB=0.936544;DP=3285;DP4=1556,1668,23,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.06393e-25;MQSB=0.827447;RPB=0.870298;SGB=-159.723;VDB=0.0325819;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.5:22232089 chr05:022232089 0 W/22232089-22232089 FN1718-S SNP A -> C AC=2;AN=188;BQB=0.576146;DP=2826;DP4=1239,1546,8,17;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0191083;MQB=0.949963;MQSB=0.386242;RPB=0.884214;SGB=19.4279;VDB=0.0606821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.5:22234298 chr05:022234298 0 W/22234298-22234298 FN-53 Single Base Substitution C-T INTERGENIC HOMO SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1547-S.SNP.5:22236915 chr05:022236915 0 W/22236915-22236915 FN1547-S Single Base Substitution A-G INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2459.SNP.5:22239789 chr05:022239789 0 W/22239789-22239789 FN2459 SNP C -> A AC=1;AN=200;BQB=0.760004;DP=4246;DP4=2427,1568,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38228e-12;MQSB=0.981157;RPB=0.979673;SGB=86.5007;VDB=0.391524;EFF=UTR_3_PRIME(MODIFIER||70||368|LOC_Os05g37930|protein_coding|CODING|LOC_Os05g37930.1|5|1),UTR_3_PRIME(MODIFIER||70||362|LOC_Os05g37930|protein_coding|CODING|LOC_Os05g37930.2|5|1),UTR_3_PRIME(MODIFIER||70||279|LOC_Os05g37930|protein_coding|CODING|LOC_Os05g37930.3|3|1) FN1006-S.SNP.5:22241578 chr05:022241578 0 W/22241578-22241578 FN1006-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3732-S.SNP.5:22241967 chr05:022241967 0 W/22241967-22241967 FN3732-S SNP C -> T AC=2;AN=190;BQB=0.898169;DP=2665;DP4=1266,1229,17,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.68223e-16;MQSB=0.89685;RPB=0.948954;SGB=110.732;VDB=0.512319;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.5:22243901 chr05:022243901 0 W/22243901-22243901 FN266-S Single Base Substitution G-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2579-S.SNP.5:22258444 chr05:022258444 0 W/22258444-22258444 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.633338;DP=4207;DP4=1965,1886,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.01508e-09;MQSB=0.934407;RPB=0.827725;SGB=-13.2407;VDB=0.191244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.5:22259103 chr05:022259103 0 W/22259103-22259103 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.0296623;DP=3969;DP4=1796,2015,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.16342e-08;MQSB=0.999866;RPB=0.913108;SGB=47.3393;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.5:22262865 chr05:022262865 0 W/22262865-22262865 FN2366 SNP G -> T AC=1;AN=192;BQB=0.74499;DP=4820;DP4=2462,2079,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207469;MQB=5.72306e-08;MQSB=0.196773;RPB=0.382243;SGB=23.7852;VDB=0.651479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.5:22276304 chr05:022276304 0 W/22276304-22276304 FN2290 SNP C -> A AC=1;AN=192;BQB=0.640705;DP=5431;DP4=2535,2550,21,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.56108e-18;MQSB=0.926923;RPB=0.734201;SGB=128.889;VDB=0.603721;EFF=UTR_5_PRIME(MODIFIER||115||165|LOC_Os05g37970|protein_coding|CODING|LOC_Os05g37970.3|1|1),UTR_5_PRIME(MODIFIER||115||189|LOC_Os05g37970|protein_coding|CODING|LOC_Os05g37970.1|1|1),UTR_5_PRIME(MODIFIER||115||171|LOC_Os05g37970|protein_coding|CODING|LOC_Os05g37970.2|1|1),UTR_5_PRIME(MODIFIER||115||131|LOC_Os05g37970|protein_coding|CODING|LOC_Os05g37970.4|1|1) FN544-S.SNP.5:22279025 chr05:022279025 0 W/22279025-22279025 FN544-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN-303.SNP.5:22279345 chr05:022279345 0 W/22279345-22279345 FN-303 Single Base Substitution G-A INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN742-S.SNP.5:22285936 chr05:022285936 0 W/22285936-22285936 FN742-S Single Base Substitution A-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN690-S.SNP.5:22289725 chr05:022289725 0 W/22289725-22289725 FN690-S Single Base Substitution G-C INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN2597-S.SNP.5:22290772 chr05:022290772 0 W/22290772-22290772 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.0538756;DP=3762;DP4=1764,1601,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00282e-05;MQSB=0.455288;RPB=0.917795;SGB=-34.6161;VDB=0.954126;EFF=INTRON(MODIFIER||||61|LOC_Os05g37990|protein_coding|CODING|LOC_Os05g37990.1|2|1) FN2107-S.SNP.5:22291230 chr05:022291230 0 W/22291230-22291230 FN2107-S SNP T -> C AC=1;AN=168;BQB=0.0140435;DP=2274;DP4=1295,915,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00489152;MQSB=0.999748;RPB=0.969763;SGB=-55.5147;VDB=0.705329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.5:22312984 chr05:022312984 0 W/22312984-22312984 FN2436 SNP G -> A AC=2;AN=200;BQB=0.977304;DP=4456;DP4=2039,2041,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000224417;MQB=2.88124e-23;MQSB=0.892352;RPB=0.987027;SGB=152.03;VDB=0.875698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S926L|1040|LOC_Os05g38060|protein_coding|CODING|LOC_Os05g38060.1|4|1) FN2482.SNP.5:22315847 chr05:022315847 0 W/22315847-22315847 FN2482 SNP T -> C AC=1;AN=200;BQB=0.781898;DP=4513;DP4=1943,2302,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56474e-05;MQSB=0.990878;RPB=0.833853;SGB=13.8539;VDB=0.105308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N119S|1040|LOC_Os05g38060|protein_coding|CODING|LOC_Os05g38060.1|1|1) FN2191-S.SNP.5:22318718 chr05:022318718 0 W/22318718-22318718 FN2191-S SNP C -> T AC=2;AN=190;BQB=0.268199;DP=4112;DP4=1968,1773,11,19;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.000972763;MQB=0.000220973;MQSB=0.0529694;RPB=0.980063;SGB=131.065;VDB=0.739111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.5:22319261 chr05:022319261 0 W/22319261-22319261 FN2330 SNP C -> T AC=1;AN=192;BQB=0.472506;DP=4701;DP4=2290,2137,11,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00553074;MQB=1.39191e-06;MQSB=0.00343586;RPB=0.993729;SGB=26.3496;VDB=0.3204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.5:22328354 chr05:022328354 0 W/22328354-22328354 FN3401-S SNP C -> A AC=2;AN=184;BQB=0.944637;DP=2479;DP4=1252,1103,21,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19438e-21;MQSB=0.995355;RPB=0.579482;SGB=93.8608;VDB=0.947735;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.5:22328632 chr05:022328632 0 W/22328632-22328632 FN-248 Single Base Substitution A-C INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3427-S.SNP.5:22329244 chr05:022329244 0 W/22329244-22329244 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.480658;DP=2454;DP4=1091,1295,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.86211e-07;MQSB=0.999967;RPB=0.0979717;SGB=48.7425;VDB=0.560775;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.5:22342401 chr05:022342401 0 W/22342401-22342401 FN824-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN897-S.SNP.5:22344725 chr05:022344725 0 W/22344725-22344725 FN897-S Single Base Substitution A-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3366-S.SNP.5:22344815 chr05:022344815 0 W/22344815-22344815 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.236816;DP=3575;DP4=1756,1715,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0041958;MQB=0.0319603;MQSB=0.0247393;RPB=0.152682;SGB=66.8296;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.5:22345924 chr05:022345924 0 W/22345924-22345924 FN1355-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-51.SNP.5:22347072 chr05:022347072 0 W/22347072-22347072 FN-51 Single Base Substitution C-T INTRON HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.5:22347072 chr05:022347072 0 W/22347072-22347072 FN-51 Single Base Substitution C-T INTRON Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3817-S.SNP.5:22348475 chr05:022348475 0 W/22348475-22348475 FN3817-S SNP T -> A AC=1;AN=190;BQB=0.948248;DP=2337;DP4=994,1104,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0192555;MQB=0.00115824;MQSB=0.0719456;RPB=0.979274;SGB=-3.65821;VDB=0.463795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.5:22363836 chr05:022363836 0 W/22363836-22363836 FN1570-S Single Base Substitution G-A INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2715-S.SNP.5:22372783 chr05:022372783 0 W/22372783-22372783 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.979444;DP=4786;DP4=2502,2006,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86214e-12;MQSB=0.956268;RPB=0.444995;SGB=50.3263;VDB=0.143514;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A96|243|LOC_Os05g38140|protein_coding|CODING|LOC_Os05g38140.1|4|1) FN3398-S.SNP.5:22373556 chr05:022373556 0 W/22373556-22373556 FN3398-S SNP T -> C AC=1;AN=184;BQB=0.264675;DP=2951;DP4=1289,1396,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05014e-08;MQSB=0.437018;RPB=0.250215;SGB=-12.1051;VDB=0.742132;EFF=UTR_3_PRIME(MODIFIER||244||243|LOC_Os05g38140|protein_coding|CODING|LOC_Os05g38140.1|5|1) FN937-S.SNP.5:22385432 chr05:022385432 0 W/22385432-22385432 FN937-S Single Base Substitution T-A INTRON HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN1116-S.SNP.5:22411249 chr05:022411249 0 W/22411249-22411249 FN1116-S Single Base Substitution A-T INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN_N2-29a-1.SNP.5:22411515 chr05:022411515 0 W/22411515-22411515 FN_N2-29a-1 Single Base Substitution G-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN1117-S.SNP.5:22430288 chr05:022430288 0 W/22430288-22430288 FN1117-S Single Base Substitution T-C INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN997-S.SNP.5:22430622 chr05:022430622 0 W/22430622-22430622 FN997-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN434-S.SNP.5:22436991 chr05:022436991 0 W/22436991-22436991 FN434-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g38264 expressed protein SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN-34.SNP.5:22437179 chr05:022437179 0 W/22437179-22437179 FN-34 Single Base Substitution A-T UTR_5_PRIME Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN3095-S.SNP.5:22445907 chr05:022445907 0 W/22445907-22445907 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.295421;DP=2973;DP4=1432,1456,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000121549;MQSB=0.147206;RPB=0.148647;SGB=57.786;VDB=0.251288;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.5:22445980 chr05:022445980 0 W/22445980-22445980 FN3369-S SNP G -> A AC=2;AN=184;BQB=0.979985;DP=3046;DP4=1602,1273,25,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.80221e-27;MQSB=0.363586;RPB=0.184091;SGB=185.569;VDB=0.87601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.5:22446466 chr05:022446466 0 W/22446466-22446466 FN3968-S SNP T -> A AC=1;AN=168;BQB=0.951684;DP=2764;DP4=1338,1317,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.10383e-12;MQSB=0.997952;RPB=0.554868;SGB=96.481;VDB=0.408242;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.5:22457239 chr05:022457239 0 W/22457239-22457239 FN698-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1039-S.SNP.5:22459723 chr05:022459723 0 W/22459723-22459723 FN1039-S Single Base Substitution A-T INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2784-S.SNP.5:22462289 chr05:022462289 0 W/22462289-22462289 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.900981;DP=4619;DP4=2293,2100,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.7829e-14;MQSB=0.914056;RPB=0.476421;SGB=83.2905;VDB=0.187516;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.5:22463759 chr05:022463759 0 W/22463759-22463759 FN733-S Single Base Substitution T-A INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN-275.SNP.5:22463770 chr05:022463770 0 W/22463770-22463770 FN-275 Single Base Substitution C-G INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2269-S.SNP.5:22465172 chr05:022465172 0 W/22465172-22465172 FN2269-S SNP G -> A AC=1;AN=190;BQB=0.971213;DP=3710;DP4=1672,1782,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30234e-12;MQSB=0.497218;RPB=0.613396;SGB=108.296;VDB=0.159831;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R206Q|496|LOC_Os05g38320|protein_coding|CODING|LOC_Os05g38320.1|1|1) FN3911-S.SNP.5:22467656 chr05:022467656 0 W/22467656-22467656 FN3911-S SNP C -> T AC=1;AN=158;BQB=0.987972;DP=2391;DP4=1213,1040,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.8438e-07;MQSB=0.990736;RPB=0.839508;SGB=30.704;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN697-S.SNP.5:22469044 chr05:022469044 0 W/22469044-22469044 FN697-S Single Base Substitution A-G INTRON HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN3748-S.SNP.5:22469210 chr05:022469210 0 W/22469210-22469210 FN3748-S SNP A -> T AC=1;AN=190;BQB=0.577961;DP=2880;DP4=1374,1406,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80918e-06;MQSB=0.948406;RPB=0.785415;SGB=62.7569;VDB=0.874197;EFF=UTR_3_PRIME(MODIFIER||12||384|LOC_Os05g38330|protein_coding|CODING|LOC_Os05g38330.2|9|1),INTRON(MODIFIER||||416|LOC_Os05g38330|protein_coding|CODING|LOC_Os05g38330.1|9|1) FN389-S.SNP.5:22476965 chr05:022476965 0 W/22476965-22476965 FN389-S Single Base Substitution G-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN952-S.SNP.5:22478078 chr05:022478078 0 W/22478078-22478078 FN952-S Single Base Substitution G-A INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2210-S.SNP.5:22478891 chr05:022478891 0 W/22478891-22478891 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.986017;DP=4702;DP4=2004,2383,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03051e-07;MQSB=0.941424;RPB=0.672232;SGB=36.1006;VDB=0.967633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.5:22478892 chr05:022478892 0 W/22478892-22478892 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.912937;DP=4699;DP4=2010,2422,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11683e-06;MQSB=0.824627;RPB=0.237835;SGB=-14.8836;VDB=0.977125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3786-S.SNP.5:22481811 chr05:022481811 0 W/22481811-22481811 FN3786-S SNP T -> G AC=1;AN=190;BQB=0.955553;DP=3119;DP4=1538,1366,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84892e-11;MQSB=0.943591;RPB=0.995697;SGB=7.21887;VDB=0.770756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L28R|522|LOC_Os05g38350|protein_coding|CODING|LOC_Os05g38350.1|1|1) FN4208-S.SNP.5:22483446 chr05:022483446 0 W/22483446-22483446 FN4208-S SNP C -> T AC=2;AN=170;BQB=0.999989;DP=2358;DP4=1090,1191,8,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.26723e-16;MQSB=0.85152;RPB=0.995792;SGB=118.955;VDB=0.444019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A265V|522|LOC_Os05g38350|protein_coding|CODING|LOC_Os05g38350.1|2|1) FN-365.SNP.5:22486506 chr05:022486506 0 W/22486506-22486506 FN-365 Single Base Substitution A-T INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN1435-S.SNP.5:22491800 chr05:022491800 0 W/22491800-22491800 FN1435-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1520-S.SNP.5:22495410 chr05:022495410 0 W/22495410-22495410 FN1520-S Single Base Substitution A-T INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3956-S.SNP.5:22503449 chr05:022503449 0 W/22503449-22503449 FN3956-S SNP T -> A AC=2;AN=168;BQB=0.279268;DP=2438;DP4=1080,1176,14,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.00397e-10;MQSB=0.922926;RPB=0.979407;SGB=-75.914;VDB=0.739543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.5:22507263 chr05:022507263 0 W/22507263-22507263 FN1715-S SNP A -> C AC=1;AN=188;BQB=0.00329528;DP=3323;DP4=1177,2096,16,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.49365e-08;MQSB=0.969183;RPB=0.955062;SGB=-175.627;VDB=0.688014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.5:22507283 chr05:022507283 0 W/22507283-22507283 FN2202-S SNP T -> C AC=1;AN=190;BQB=0.707418;DP=4752;DP4=1758,2688,4,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26922e-13;MQSB=0.0280711;RPB=0.952659;SGB=121.957;VDB=0.3804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.5:22507688 chr05:022507688 0 W/22507688-22507688 FN2106-S SNP C -> T AC=1;AN=168;BQB=0.00647729;DP=1954;DP4=642,1241,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000142442;MQSB=0.168517;RPB=0.284938;SGB=-112.21;VDB=0.167399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.5:22512199 chr05:022512199 0 W/22512199-22512199 FN3451-S SNP C -> T AC=1;AN=184;BQB=0.83971;DP=3477;DP4=1459,1862,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.44796e-08;MQSB=0.966474;RPB=0.71353;SGB=53.2642;VDB=0.403098;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.5:22518973 chr05:022518973 0 W/22518973-22518973 FN4177-S SNP A -> G AC=1;AN=170;BQB=0.99057;DP=2868;DP4=1155,1490,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.95303e-07;MQSB=0.998528;RPB=0.928206;SGB=31.4354;VDB=0.722689;EFF=INTRON(MODIFIER||||822|LOC_Os05g38400|protein_coding|CODING|LOC_Os05g38400.1|2|1),INTRON(MODIFIER||||667|LOC_Os05g38400|protein_coding|CODING|LOC_Os05g38400.2|2|1),INTRON(MODIFIER||||667|LOC_Os05g38400|protein_coding|CODING|LOC_Os05g38400.3|2|1) FN1232-S.SNP.5:22523109 chr05:022523109 0 W/22523109-22523109 FN1232-S Single Base Substitution T-C INTRON HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3551-S.SNP.5:22525135 chr05:022525135 0 W/22525135-22525135 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.0670377;DP=2597;DP4=1144,1267,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00924143;MQB=0.0253366;MQSB=0;RPB=0.301122;SGB=-58.9891;VDB=0.339003;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.5:22529465 chr05:022529465 0 W/22529465-22529465 FN895-S Single Base Substitution A-C INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN-151.SNP.5:22531121 chr05:022531121 0 W/22531121-22531121 FN-151 Single Base Substitution C-T INTERGENIC HOMO SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1407-S.SNP.5:22531661 chr05:022531661 0 W/22531661-22531661 FN1407-S Single Base Substitution C-T INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN3815-S.SNP.5:22532982 chr05:022532982 0 W/22532982-22532982 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.93813;DP=2955;DP4=1384,1461,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00167e-05;MQSB=8.96637e-05;RPB=0.591181;SGB=39.9877;VDB=0.975023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.5:22533233 chr05:022533233 0 W/22533233-22533233 FN2113-S SNP G -> T AC=2;AN=168;BQB=0.932186;DP=3274;DP4=1557,1641,8,20;HOB=0.0235261;ICB=0.494119;MQ=20;MQ0F=0.478009;MQB=0.175695;MQSB=0;RPB=0.240482;SGB=-43.4892;VDB=0.262654;EFF=INTERGENIC(MODIFIER||||||||||1) FN783-S.SNP.5:22541625 chr05:022541625 0 W/22541625-22541625 FN783-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g38430 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2730-S.SNP.5:22551499 chr05:022551499 0 W/22551499-22551499 FN2730-S SNP A -> T AC=2;AN=200;BQB=0.990069;DP=4843;DP4=2115,2471,8,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32117e-11;MQSB=0.859432;RPB=0.378698;SGB=95.7111;VDB=0.496307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.5:22556297 chr05:022556297 0 W/22556297-22556297 FN2217-S SNP A -> G AC=1;AN=190;BQB=0.864;DP=5078;DP4=2455,2328,16,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53526e-12;MQSB=0.909841;RPB=0.88122;SGB=-10.4526;VDB=0.110966;EFF=INTRON(MODIFIER||||588|LOC_Os05g38460|protein_coding|CODING|LOC_Os05g38460.1|6|1) FN3555-S.SNP.5:22560122 chr05:022560122 0 W/22560122-22560122 FN3555-S SNP T -> C AC=2;AN=188;BQB=0.900218;DP=2816;DP4=1453,1197,26,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.681e-23;MQSB=0.798287;RPB=0.75981;SGB=121.535;VDB=0.64427;EFF=INTRON(MODIFIER||||588|LOC_Os05g38460|protein_coding|CODING|LOC_Os05g38460.1|2|1) FN2797-S.SNP.5:22562896 chr05:022562896 0 W/22562896-22562896 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.99414;DP=4115;DP4=2081,1791,31,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.50553e-32;MQSB=0.974528;RPB=0.587592;SGB=191.144;VDB=0.85968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.5:22577479 chr05:022577479 0 W/22577479-22577479 FN1613-S Single Base Substitution T-G UTR_3_PRIME Homo SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN1420-S.SNP.5:22582515 chr05:022582515 0 W/22582515-22582515 FN1420-S Single Base Substitution C-T INTRON HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1195-S.SNP.5:22591086 chr05:022591086 0 W/22591086-22591086 FN1195-S Single Base Substitution C-T INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. W276-2-1.SNP.5:22594754 chr05:022594754 0 W/22594754-22594754 W276-2-1 Single Base Substitution A-G INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2697-S.SNP.5:22608729 chr05:022608729 0 W/22608729-22608729 FN2697-S SNP T -> C AC=2;AN=200;BQB=0.0582008;DP=3211;DP4=695,2323,11,41;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000622859;MQB=7.9837e-24;MQSB=0.528835;RPB=0.993261;SGB=167.112;VDB=0.000250466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3576-S.SNP.5:22613998 chr05:022613998 0 W/22613998-22613998 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.442745;DP=3607;DP4=1767,1744,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=25;MQ0F=0.168284;MQB=0.236387;MQSB=0;RPB=0.979642;SGB=53.7007;VDB=0.728559;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1001|1221|LOC_Os05g38540|protein_coding|CODING|LOC_Os05g38540.1|5|1) FN728-S.SNP.5:22621134 chr05:022621134 0 W/22621134-22621134 FN728-S Single Base Substitution G-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2637-S.SNP.5:22621524 chr05:022621524 0 W/22621524-22621524 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.913784;DP=4823;DP4=2200,2347,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.43842e-14;MQSB=0.940022;RPB=0.986753;SGB=69.1109;VDB=0.998426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.5:22621818 chr05:022621818 0 W/22621818-22621818 FN3881-S SNP G -> A AC=2;AN=158;BQB=0.947713;DP=2229;DP4=1084,1066,7,4;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.85373e-07;MQSB=0.563564;RPB=0.933967;SGB=42.6978;VDB=0.575864;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.5:22621842 chr05:022621842 0 W/22621842-22621842 FN472-S Single Base Substitution C-A INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3466-S.SNP.5:22624466 chr05:022624466 0 W/22624466-22624466 FN3466-S SNP T -> A AC=2;AN=184;BQB=0.996201;DP=2105;DP4=1169,830,14,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.50968e-12;MQSB=0.998918;RPB=0.18894;SGB=93.9603;VDB=0.305532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.5:22627269 chr05:022627269 0 W/22627269-22627269 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.323377;DP=4385;DP4=2444,1758,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.1948e-11;MQSB=0.939633;RPB=0.798146;SGB=39.7248;VDB=0.701429;EFF=INTRON(MODIFIER||||536|LOC_Os05g38570|protein_coding|CODING|LOC_Os05g38570.1|4|1) FN320-S.SNP.5:22629338 chr05:022629338 0 W/22629338-22629338 FN320-S Single Base Substitution C-T INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2750-S.SNP.5:22629803 chr05:022629803 0 W/22629803-22629803 FN2750-S SNP A -> T AC=1;AN=200;BQB=0.489234;DP=4083;DP4=1460,2341,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26534e-11;MQSB=0.878001;RPB=0.979719;SGB=51.0851;VDB=0.258803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.5:22643134 chr05:022643134 0 W/22643134-22643134 FN1504-S Single Base Substitution A-C INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN3779-S.SNP.5:22647895 chr05:022647895 0 W/22647895-22647895 FN3779-S SNP T -> C AC=2;AN=190;BQB=0.829239;DP=2038;DP4=1099,802,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.41834e-11;MQSB=0.898092;RPB=0.249081;SGB=21.2038;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.5:22647928 chr05:022647928 0 W/22647928-22647928 FN-218 Single Base Substitution G-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2673-S.SNP.5:22654220 chr05:022654220 0 W/22654220-22654220 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.803158;DP=5312;DP4=2706,2332,22,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30783e-22;MQSB=0.909324;RPB=0.603177;SGB=178.604;VDB=0.151404;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.5:22654263 chr05:022654263 0 W/22654263-22654263 FN4136-S SNP C -> A AC=1;AN=170;BQB=0.982829;DP=2743;DP4=1488,1106,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.18098e-06;MQSB=0.910489;RPB=0.958247;SGB=47.8722;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.5:22658402 chr05:022658402 0 W/22658402-22658402 FN742-S Single Base Substitution T-C INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2487.SNP.5:22661784 chr05:022661784 0 W/22661784-22661784 FN2487 SNP C -> T AC=1;AN=200;BQB=0.995355;DP=4463;DP4=2078,2053,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.60748e-08;MQSB=0.801359;RPB=0.989789;SGB=29.4849;VDB=0.780961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S3L|143|LOC_Os05g38650|protein_coding|CODING|LOC_Os05g38650.1|1|1) FN2146-S.SNP.5:22662325 chr05:022662325 0 W/22662325-22662325 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.0928702;DP=2392;DP4=1340,1015,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.43047e-05;MQSB=0.983847;RPB=0.995727;SGB=-82.6471;VDB=0.203165;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.5:22664645 chr05:022664645 0 W/22664645-22664645 FN551-S Single Base Substitution G-C INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3798-S.SNP.5:22667365 chr05:022667365 0 W/22667365-22667365 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.805829;DP=3293;DP4=1466,1715,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.93961e-08;MQSB=0.945303;RPB=0.047585;SGB=26.2136;VDB=0.566554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.5:22667369 chr05:022667369 0 W/22667369-22667369 FN3421-S SNP G -> T AC=1;AN=184;BQB=0.997621;DP=3291;DP4=1520,1647,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70063e-11;MQSB=0.989228;RPB=0.993939;SGB=53.3568;VDB=0.00743287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.5:22669576 chr05:022669576 0 W/22669576-22669576 FN3477-S SNP G -> A AC=1;AN=184;BQB=0.826917;DP=2710;DP4=1217,1430,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.94113e-05;MQSB=0.624985;RPB=0.668877;SGB=13.188;VDB=0.842582;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.5:22679964 chr05:022679964 0 W/22679964-22679964 FN784-S Single Base Substitution T-G INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3377-S.SNP.5:22683785 chr05:022683785 0 W/22683785-22683785 FN3377-S SNP T -> C AC=1;AN=184;BQB=0.866604;DP=3033;DP4=1557,1386,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.57001e-08;MQSB=0.992835;RPB=0.842292;SGB=42.7914;VDB=0.236831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.5:22684462 chr05:022684462 0 W/22684462-22684462 FN2797-S SNP C -> A AC=1;AN=198;BQB=0.914971;DP=4829;DP4=2669,1820,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.38001e-08;MQSB=0.946228;RPB=0.972119;SGB=40.149;VDB=0.344327;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.5:22687426 chr05:022687426 0 W/22687426-22687426 FN496-S Single Base Substitution A-T INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2634-S.SNP.5:22688069 chr05:022688069 0 W/22688069-22688069 FN2634-S SNP C -> T AC=1;AN=200;BQB=0.603316;DP=2627;DP4=750,1604,2,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000380662;MQB=1.28884e-06;MQSB=4.93502e-10;RPB=0.295368;SGB=49.6594;VDB=0.848205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.5:22688925 chr05:022688925 0 W/22688925-22688925 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1315-S.SNP.5:22689132 chr05:022689132 0 W/22689132-22689132 FN1315-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2655-S.SNP.5:22689418 chr05:022689418 0 W/22689418-22689418 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.45409;DP=4998;DP4=2567,2121,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.89915e-15;MQSB=0.462488;RPB=0.563803;SGB=123.342;VDB=0.109507;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.5:22697776 chr05:022697776 0 W/22697776-22697776 FN788-S Single Base Substitution A-C INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN3673-S.SNP.5:22707411 chr05:022707411 0 W/22707411-22707411 FN3673-S SNP G -> A AC=1;AN=190;BQB=0.968934;DP=2834;DP4=1457,1292,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03484e-09;MQSB=0.999038;RPB=0.853153;SGB=39.6545;VDB=0.375798;EFF=INTRON(MODIFIER||||1026|LOC_Os05g38710|protein_coding|CODING|LOC_Os05g38710.1|10|1) FN3879-S.SNP.5:22714201 chr05:022714201 0 W/22714201-22714201 FN3879-S SNP T -> C AC=1;AN=158;BQB=0.905531;DP=1967;DP4=1077,735,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.95329e-09;MQSB=0.924999;RPB=0.846552;SGB=40.8124;VDB=0.99881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.5:22714516 chr05:022714516 0 W/22714516-22714516 FN2483 SNP A -> T AC=1;AN=200;BQB=0.966951;DP=4509;DP4=2355,1891,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.69693e-11;MQSB=0.936092;RPB=0.830834;SGB=65.5058;VDB=0.735687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.5:22717538 chr05:022717538 0 W/22717538-22717538 FN2649-S SNP G -> T AC=1;AN=200;BQB=0.935418;DP=4680;DP4=2240,2204,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75507e-13;MQSB=0.862114;RPB=0.313774;SGB=65.5058;VDB=0.235337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.5:22734832 chr05:022734832 0 W/22734832-22734832 FN-8 Single Base Substitution C-T INTERGENIC Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN934-S.SNP.5:22744155 chr05:022744155 0 W/22744155-22744155 FN934-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g38760 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3944-S.SNP.5:22746710 chr05:022746710 0 W/22746710-22746710 FN3944-S SNP G -> T AC=2;AN=168;BQB=0.212775;DP=2924;DP4=1311,1396,22,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.57829e-14;MQSB=0.974963;RPB=0.919905;SGB=120.518;VDB=0.983741;EFF=INTRON(MODIFIER||||417|LOC_Os05g38770|protein_coding|CODING|LOC_Os05g38770.1|2|1) FN1666-S.SNP.5:22754655 chr05:022754655 0 W/22754655-22754655 FN1666-S SNP A -> G AC=1;AN=188;BQB=0.917331;DP=3243;DP4=1515,1692,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.34202e-06;MQSB=0.938258;RPB=0.448386;SGB=31.1628;VDB=0.283434;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.5:22768029 chr05:022768029 0 W/22768029-22768029 FN995-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN900-S.SNP.5:22774621 chr05:022774621 0 W/22774621-22774621 FN900-S Single Base Substitution C-G INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN898-S.SNP.5:22776086 chr05:022776086 0 W/22776086-22776086 FN898-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1504-S.SNP.5:22788001 chr05:022788001 0 W/22788001-22788001 FN1504-S Single Base Substitution T-A INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1731-S.SNP.5:22788576 chr05:022788576 0 W/22788576-22788576 FN1731-S SNP T -> C AC=1;AN=188;BQB=0.28653;DP=3763;DP4=1867,1857,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.80214e-09;MQSB=0.949442;RPB=0.651854;SGB=13.2547;VDB=0.72961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:22789785 chr05:022789785 0 W/22789785-22789785 FN2247-S SNP C -> G AC=1;AN=190;BQB=0.799801;DP=4518;DP4=2251,1934,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5975e-16;MQSB=0.920334;RPB=0.478657;SGB=-42.5702;VDB=0.199065;EFF=INTRON(MODIFIER||||706|LOC_Os05g38850|protein_coding|CODING|LOC_Os05g38850.1|1|1) FN885-S.SNP.5:22791252 chr05:022791252 0 W/22791252-22791252 FN885-S Single Base Substitution C-A INTRON HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN2116-S.SNP.5:22791656 chr05:022791656 0 W/22791656-22791656 FN2116-S SNP G -> A AC=2;AN=168;BQB=0.532826;DP=3993;DP4=1858,2082,18,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.11531e-19;MQSB=0.945339;RPB=0.810503;SGB=-141.738;VDB=0.910356;EFF=INTRON(MODIFIER||||706|LOC_Os05g38850|protein_coding|CODING|LOC_Os05g38850.1|5|1) FN3763-S.SNP.5:22805146 chr05:022805146 0 W/22805146-22805146 FN3763-S SNP A -> T AC=1;AN=190;BQB=0.953137;DP=2504;DP4=1254,1144,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.45869e-09;MQSB=0.195113;RPB=0.910596;SGB=39.6545;VDB=0.101715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.5:22805150 chr05:022805150 0 W/22805150-22805150 FN3763-S SNP T -> C AC=1;AN=190;BQB=0.655527;DP=2514;DP4=1270,1164,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.48113e-09;MQSB=0.151221;RPB=0.77445;SGB=26.2136;VDB=0.0273861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.5:22805154 chr05:022805154 0 W/22805154-22805154 FN3763-S SNP G -> A AC=1;AN=190;BQB=0.99841;DP=2516;DP4=1265,1161,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.29477e-10;MQSB=0.476199;RPB=0.749198;SGB=62.7569;VDB=0.215293;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.5:22808004 chr05:022808004 0 W/22808004-22808004 FN-245 Single Base Substitution G-A INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN805-S.SNP.5:22809400 chr05:022809400 0 W/22809400-22809400 FN805-S Single Base Substitution C-T INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2782-S.SNP.5:22810958 chr05:022810958 0 W/22810958-22810958 FN2782-S SNP A -> G AC=1;AN=198;BQB=0.97309;DP=4078;DP4=2117,1714,20,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66832e-14;MQSB=0.987624;RPB=0.473868;SGB=94.0758;VDB=0.731899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.5:22815580 chr05:022815580 0 W/22815580-22815580 FN2758-S SNP T -> A AC=2;AN=200;BQB=0.64917;DP=4840;DP4=2418,2231,18,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.2694e-22;MQSB=0.843991;RPB=0.746416;SGB=160.183;VDB=0.943617;EFF=INTRON(MODIFIER||||524|LOC_Os05g38890|protein_coding|CODING|LOC_Os05g38890.1|4|1) FN_N1-26-1.SNP.5:22816893 chr05:022816893 0 W/22816893-22816893 FN_N1-26-1 Single Base Substitution C-T HET LOC_Os05g38900 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN_N1-26-1.SNP.5:22816894 chr05:022816894 0 W/22816894-22816894 FN_N1-26-1 Single Base Substitution A-T HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1376-S.SNP.5:22818578 chr05:022818578 0 W/22818578-22818578 FN1376-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2404.SNP.5:22818769 chr05:022818769 0 W/22818769-22818769 FN2404 SNP C -> T AC=2;AN=200;BQB=0.0167875;DP=2309;DP4=1013,1148,14,13;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=6.06205e-08;MQSB=1.09273e-13;RPB=0.0747676;SGB=118.737;VDB=0.346885;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V171M|175|LOC_Os05g38910|protein_coding|CODING|LOC_Os05g38910.1|1|1) FN4202-S.SNP.5:22823145 chr05:022823145 0 W/22823145-22823145 FN4202-S SNP A -> C AC=1;AN=170;BQB=0.99949;DP=2356;DP4=1235,1023,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00339559;MQB=0.00121394;MQSB=0.924056;RPB=0.707752;SGB=83.4133;VDB=0.37608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D463A|607|LOC_Os05g38920|protein_coding|CODING|LOC_Os05g38920.1|4|1) FN3885-S.SNP.5:22829214 chr05:022829214 0 W/22829214-22829214 FN3885-S SNP A -> G AC=2;AN=158;BQB=0.761769;DP=2497;DP4=1370,983,36,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.93539e-27;MQSB=0.965599;RPB=0.616288;SGB=201.612;VDB=0.64207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.5:22845229 chr05:022845229 0 W/22845229-22845229 FN3818-S SNP G -> A AC=1;AN=190;BQB=0.984363;DP=2900;DP4=1488,1311,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000689655;MQB=1.50292e-14;MQSB=9.63191e-05;RPB=0.729844;SGB=82.301;VDB=0.516661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.5:22848184 chr05:022848184 0 W/22848184-22848184 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.160848;DP=2760;DP4=701,2010,6,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000362319;MQB=6.74738e-08;MQSB=0.124689;RPB=0.999745;SGB=-103.201;VDB=0.108502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.5:22848812 chr05:022848812 0 W/22848812-22848812 FN2611-S SNP C -> A AC=1;AN=200;BQB=0.127758;DP=4207;DP4=2446,1457,18,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0304255;MQB=0.349352;MQSB=0.00343447;RPB=0.0550358;SGB=132.552;VDB=0.705156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.5:22852394 chr05:022852394 0 W/22852394-22852394 FN3827-S SNP T -> C AC=2;AN=190;BQB=0.64692;DP=2974;DP4=1332,1456,25,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.22941e-19;MQSB=0.981388;RPB=0.0962826;SGB=176.604;VDB=0.609832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.5:22861731 chr05:022861731 0 W/22861731-22861731 FN2684-S SNP T -> C AC=1;AN=200;BQB=0.81074;DP=4536;DP4=2108,2215,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09883e-11;MQSB=0.967546;RPB=0.496166;SGB=61.9006;VDB=0.25676;EFF=INTRON(MODIFIER||||819|LOC_Os05g38980|protein_coding|CODING|LOC_Os05g38980.1|3|1) FN4070-S.SNP.5:22870434 chr05:022870434 0 W/22870434-22870434 FN4070-S SNP A -> T AC=2;AN=182;BQB=0.919124;DP=3108;DP4=1608,1312,20,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.63297e-21;MQSB=0.653148;RPB=0.981117;SGB=137.443;VDB=0.716345;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.5:22871796 chr05:022871796 0 W/22871796-22871796 FN740-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN4344-S.SNP.5:22891557 chr05:022891557 0 W/22891557-22891557 FN4344-S SNP A -> T AC=1;AN=170;BQB=0.984785;DP=3025;DP4=1517,1431,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0191736;MQB=0.951839;MQSB=0.00348421;RPB=0.490279;SGB=56.7575;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.5:22894813 chr05:022894813 0 W/22894813-22894813 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.474603;DP=6270;DP4=3208,2590,23,19;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0379585;MQB=0.632543;MQSB=6.22431e-10;RPB=0.910141;SGB=-0.482811;VDB=0.438198;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.5:22894813 chr05:022894813 0 W/22894813-22894813 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN829-S.SNP.5:22898705 chr05:022898705 0 W/22898705-22898705 FN829-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g39040 retrotransposon protein, putative, unclassified, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1650-S.SNP.5:22900574 chr05:022900574 0 W/22900574-22900574 FN1650-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os05g39040 retrotransposon protein, putative, unclassified, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2630-S.SNP.5:22907612 chr05:022907612 0 W/22907612-22907612 FN2630-S SNP G -> C AC=1;AN=200;BQB=0.952873;DP=5139;DP4=1976,2744,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79347e-14;MQSB=0.999732;RPB=0.982077;SGB=63.3521;VDB=0.216398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.5:22907727 chr05:022907727 0 W/22907727-22907727 FN3707-S SNP A -> G AC=1;AN=190;BQB=0.809546;DP=2986;DP4=1091,1787,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.92054e-08;MQSB=0.411761;RPB=0.689127;SGB=58.2031;VDB=0.0501844;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.5:22920966 chr05:022920966 0 W/22920966-22920966 FN509-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g39090 CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1520-S.SNP.5:22921735 chr05:022921735 0 W/22921735-22921735 FN1520-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os05g39090 CAMK_CAMK_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1295-S.SNP.5:22922578 chr05:022922578 0 W/22922578-22922578 FN1295-S Single Base Substitution C-T INTRON HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2246-S.SNP.5:22929216 chr05:022929216 0 W/22929216-22929216 FN2246-S SNP T -> A AC=1;AN=190;BQB=0.645769;DP=4890;DP4=2406,2257,21,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.33492e-17;MQSB=0.847013;RPB=0.975522;SGB=33.6348;VDB=0.121511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.5:22938916 chr05:022938916 0 W/22938916-22938916 FN3056-S SNP C -> A AC=1;AN=184;BQB=0.420629;DP=2562;DP4=1216,1252,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5569e-07;MQSB=0.943126;RPB=0.589295;SGB=6.80232;VDB=0.541148;EFF=INTRON(MODIFIER||||434|LOC_Os05g39120|protein_coding|CODING|LOC_Os05g39120.1|1|1) FN2157-S.SNP.5:22949094 chr05:022949094 0 W/22949094-22949094 FN2157-S SNP A -> T AC=2;AN=168;BQB=0.549032;DP=3951;DP4=1937,1957,30,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.25048e-18;MQSB=0.973471;RPB=0.603134;SGB=-5.46373;VDB=0.00658116;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y544*|1419|LOC_Os05g39130|protein_coding|CODING|LOC_Os05g39130.1|4|1);LOF=(LOC_Os05g39130|LOC_Os05g39130|1|1.00);NMD=(LOC_Os05g39130|LOC_Os05g39130|1|1.00) FN3707-S.SNP.5:22952420 chr05:022952420 0 W/22952420-22952420 FN3707-S SNP T -> C AC=1;AN=190;BQB=0.932759;DP=2999;DP4=1361,1501,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42755e-11;MQSB=0.999677;RPB=0.451476;SGB=50.3161;VDB=0.748287;EFF=INTRON(MODIFIER||||1419|LOC_Os05g39130|protein_coding|CODING|LOC_Os05g39130.1|1|1) FN4183-S.SNP.5:22961740 chr05:022961740 0 W/22961740-22961740 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.550573;DP=3020;DP4=1555,1016,6,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.42465e-07;MQSB=0.988219;RPB=0.999988;SGB=-160.954;VDB=0.15972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T112A|439|LOC_Os05g39150|protein_coding|CODING|LOC_Os05g39150.1|1|1) FN1258-S.SNP.5:22965347 chr05:022965347 0 W/22965347-22965347 FN1258-S Single Base Substitution C-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2691-S.SNP.5:22970976 chr05:022970976 0 W/22970976-22970976 FN2691-S SNP G -> T AC=2;AN=200;BQB=0.947602;DP=4670;DP4=2196,2170,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.96515e-23;MQSB=0.720801;RPB=0.30861;SGB=94.6142;VDB=0.395966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V249F|407|LOC_Os05g39170|protein_coding|CODING|LOC_Os05g39170.1|1|1) FN2648-S.SNP.5:22971043 chr05:022971043 0 W/22971043-22971043 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.350272;DP=4881;DP4=2260,2212,21,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77198e-16;MQSB=0.217786;RPB=0.993158;SGB=150.973;VDB=0.894121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A271V|407|LOC_Os05g39170|protein_coding|CODING|LOC_Os05g39170.1|1|1) FN3765-S.SNP.5:22971916 chr05:022971916 0 W/22971916-22971916 FN3765-S SNP A -> C AC=1;AN=190;BQB=0.999034;DP=2457;DP4=1125,1233,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.39023e-06;MQSB=0.991133;RPB=0.70967;SGB=28.9929;VDB=0.996625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.5:22972903 chr05:022972903 0 W/22972903-22972903 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.806371;DP=4573;DP4=2264,2083,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.23059e-10;MQSB=0.742725;RPB=0.865964;SGB=77.2904;VDB=0.424773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.5:22982856 chr05:022982856 0 W/22982856-22982856 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.879932;DP=2670;DP4=1122,1443,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.629503;MQSB=0.17741;RPB=0.990619;SGB=26.2136;VDB=0.182473;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.5:22983528 chr05:022983528 0 W/22983528-22983528 FN1639-S Single Base Substitution G-A INTERGENIC Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. 705-6.SNP.5:22983577 chr05:022983577 0 W/22983577-22983577 705-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1182-S.SNP.5:22997167 chr05:022997167 0 W/22997167-22997167 FN1182-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3366-S.SNP.5:23001312 chr05:023001312 0 W/23001312-23001312 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.421173;DP=2439;DP4=1141,1214,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.85524e-13;MQSB=0.99941;RPB=0.988449;SGB=35.884;VDB=0.00246914;EFF=INTRON(MODIFIER||||866|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.1|8|1),INTRON(MODIFIER||||840|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.2|8|1) FN3366-S.SNP.5:23001313 chr05:023001313 0 W/23001313-23001313 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.553136;DP=2447;DP4=1122,1205,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15953e-11;MQSB=0.980615;RPB=0.505184;SGB=-13.1487;VDB=0.000907181;EFF=INTRON(MODIFIER||||866|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.1|8|1),INTRON(MODIFIER||||840|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.2|8|1) FN3867-S.SNP.5:23003882 chr05:023003882 0 W/23003882-23003882 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.942617;DP=2452;DP4=1142,1220,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.25181e-05;MQSB=0.999768;RPB=0.138931;SGB=9.60209;VDB=0.297266;EFF=INTRON(MODIFIER||||866|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.1|12|1),INTRON(MODIFIER||||840|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.2|11|1) FN4040-S.SNP.5:23004072 chr05:023004072 0 W/23004072-23004072 FN4040-S SNP G -> T AC=1;AN=168;BQB=0.963573;DP=2612;DP4=1250,1277,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.94346e-07;MQSB=0.989159;RPB=0.72184;SGB=52.1728;VDB=0.467431;EFF=INTRON(MODIFIER||||866|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.1|12|1),INTRON(MODIFIER||||840|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.2|11|1) FN1552-S.SNP.5:23005216 chr05:023005216 0 W/23005216-23005216 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.612639;DP=3664;DP4=1737,1887,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.00713e-15;MQSB=0.986128;RPB=0.465164;SGB=54.0524;VDB=0.020032;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W848*|866|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.1|17|1),STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W822*|840|LOC_Os05g39230|protein_coding|CODING|LOC_Os05g39230.2|16|1) FN2199-S.SNP.5:23008290 chr05:023008290 0 W/23008290-23008290 FN2199-S SNP A -> C AC=1;AN=190;BQB=0.628544;DP=5273;DP4=2245,2693,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.87467e-08;MQSB=0.980559;RPB=0.852067;SGB=62.7569;VDB=0.384463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.5:23010966 chr05:023010966 0 W/23010966-23010966 FN3286-S SNP G -> T AC=1;AN=184;BQB=0.72172;DP=3222;DP4=1381,1723,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19254e-09;MQSB=0.977981;RPB=0.994326;SGB=56.8786;VDB=0.495195;EFF=INTRON(MODIFIER||||486|LOC_Os05g39240|protein_coding|CODING|LOC_Os05g39240.1|1|1) FN2771-S.SNP.5:23021116 chr05:023021116 0 W/23021116-23021116 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.71825;DP=3647;DP4=1827,1588,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000274198;MQB=1.46585e-08;MQSB=0.867622;RPB=0.949941;SGB=63.3342;VDB=0.564511;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S161|194|LOC_Os05g39260|protein_coding|CODING|LOC_Os05g39260.1|1|1) FN2265-S.SNP.5:23021902 chr05:023021902 0 W/23021902-23021902 FN2265-S SNP A -> C AC=1;AN=190;BQB=0.390149;DP=4922;DP4=2123,2490,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.42521e-08;MQSB=0.000177036;RPB=0.870453;SGB=22.7576;VDB=0.659043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.5:23022831 chr05:023022831 0 W/23022831-23022831 FN1473-S Single Base Substitution A-T INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN3770-S.SNP.5:23023665 chr05:023023665 0 W/23023665-23023665 FN3770-S SNP T -> G AC=2;AN=190;BQB=0.808376;DP=3019;DP4=1417,1467,3,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.54352e-08;MQSB=0.980658;RPB=0.470201;SGB=53.8699;VDB=0.95965;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.5:23031233 chr05:023031233 0 W/23031233-23031233 FN494-S Single Base Substitution G-A INTRON HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN2126-S.SNP.5:23031833 chr05:023031833 0 W/23031833-23031833 FN2126-S SNP A -> T AC=2;AN=168;BQB=0.944207;DP=3138;DP4=1757,1320,17,14;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.181644;MQB=0.302172;MQSB=1.28678e-10;RPB=0.850653;SGB=96.5026;VDB=0.518487;EFF=INTRON(MODIFIER||||659|LOC_Os05g39270|protein_coding|CODING|LOC_Os05g39270.1|5|1) FN347-S.SNP.5:23033123 chr05:023033123 0 W/23033123-23033123 FN347-S Single Base Substitution G-A INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1698-S.SNP.5:23034158 chr05:023034158 0 W/23034158-23034158 FN1698-S SNP G -> A AC=2;AN=188;BQB=0.0047572;DP=3317;DP4=1621,1646,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.91539e-08;MQSB=0.875219;RPB=0.681955;SGB=-262.073;VDB=0.961152;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q654|659|LOC_Os05g39270|protein_coding|CODING|LOC_Os05g39270.1|7|1) FN-169.SNP.5:23038580 chr05:023038580 0 W/23038580-23038580 FN-169 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g39290 retrotransposon protein, putative, unclassified, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2106-S.SNP.5:23045177 chr05:023045177 0 W/23045177-23045177 FN2106-S SNP T -> G AC=1;AN=168;BQB=0.939499;DP=3661;DP4=2147,1465,22,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.69837e-15;MQSB=0.999239;RPB=0.997321;SGB=-10.6335;VDB=0.602641;EFF=INTRON(MODIFIER||||206|LOC_Os05g39300|protein_coding|CODING|LOC_Os05g39300.1|1|1) FN2589-S.SNP.5:23082853 chr05:023082853 0 W/23082853-23082853 FN2589-S SNP C -> A AC=1;AN=198;BQB=0.99637;DP=3739;DP4=1862,1661,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.11929e-08;MQSB=0.630469;RPB=0.0701689;SGB=49.5489;VDB=0.0143265;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R285|500|LOC_Os05g39350|protein_coding|CODING|LOC_Os05g39350.1|1|1) FN3415-S.SNP.5:23088185 chr05:023088185 0 W/23088185-23088185 FN3415-S SNP G -> A AC=1;AN=184;BQB=0.74635;DP=3797;DP4=1852,1843,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000164758;MQSB=0.882348;RPB=0.624404;SGB=39.699;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.5:23090816 chr05:023090816 0 W/23090816-23090816 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.865451;DP=5138;DP4=2454,2406,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90945e-12;MQSB=0.495916;RPB=0.703895;SGB=15.9106;VDB=0.983799;EFF=INTRON(MODIFIER||||334|LOC_Os05g39370|protein_coding|CODING|LOC_Os05g39370.1|1|1) FN4052-S.SNP.5:23094204 chr05:023094204 0 W/23094204-23094204 FN4052-S SNP T -> C AC=2;AN=168;BQB=0.994159;DP=2698;DP4=1127,1456,22,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.3391e-21;MQSB=0.94105;RPB=0.2349;SGB=130.811;VDB=0.388757;EFF=SPLICE_SITE_REGION(LOW||||334|LOC_Os05g39370|protein_coding|CODING|LOC_Os05g39370.1|4|1),INTRON(MODIFIER||||334|LOC_Os05g39370|protein_coding|CODING|LOC_Os05g39370.1|4|1) FN2530-S.SNP.5:23098994 chr05:023098994 0 W/23098994-23098994 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.545176;DP=4657;DP4=2308,2108,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.21413e-09;MQSB=0.971167;RPB=0.539628;SGB=34.5346;VDB=0.633565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.5:23100668 chr05:023100668 0 W/23100668-23100668 FN1062-S Single Base Substitution T-G INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1053-S.SNP.5:23107547 chr05:023107547 0 W/23107547-23107547 FN1053-S Single Base Substitution G-T INTRON HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN-251.SNP.5:23111893 chr05:023111893 0 W/23111893-23111893 FN-251 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN1042-S.SNP.5:23114199 chr05:023114199 0 W/23114199-23114199 FN1042-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g39410 expressed protein SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3849-S.SNP.5:23114544 chr05:023114544 0 W/23114544-23114544 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.99328;DP=2409;DP4=1157,1153,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.25316e-07;MQSB=0.898412;RPB=0.929697;SGB=30.704;VDB=0.864959;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I301|624|LOC_Os05g39410|protein_coding|CODING|LOC_Os05g39410.2|6|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I302|625|LOC_Os05g39410|protein_coding|CODING|LOC_Os05g39410.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I164|487|LOC_Os05g39410|protein_coding|CODING|LOC_Os05g39410.3|5|1) FN795-S.SNP.5:23121424 chr05:023121424 0 W/23121424-23121424 FN795-S Single Base Substitution C-T INTRON HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2370.SNP.5:23122280 chr05:023122280 0 W/23122280-23122280 FN2370 SNP C -> T AC=1;AN=192;BQB=0.752231;DP=4436;DP4=2268,1808,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.85168e-08;MQSB=0.255336;RPB=0.903748;SGB=12.0478;VDB=0.901409;EFF=INTRON(MODIFIER||||493|LOC_Os05g39420|protein_coding|CODING|LOC_Os05g39420.1|4|1) FN3376-S.SNP.5:23131082 chr05:023131082 0 W/23131082-23131082 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.798822;DP=3738;DP4=1949,1659,18,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.80404e-18;MQSB=0.876149;RPB=0.281523;SGB=95.6183;VDB=0.407613;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.5:23133274 chr05:023133274 0 W/23133274-23133274 FN928-S Single Base Substitution G-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3510-S.SNP.5:23134497 chr05:023134497 0 W/23134497-23134497 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.969114;DP=2637;DP4=1441,1141,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.45505e-07;MQSB=0.979304;RPB=0.233448;SGB=53.5223;VDB=0.601395;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.5:23138099 chr05:023138099 0 W/23138099-23138099 FN3925-S SNP C -> T AC=1;AN=158;BQB=0.999987;DP=2697;DP4=1479,1106,12,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.60675e-13;MQSB=0.9618;RPB=0.774314;SGB=95.131;VDB=0.169262;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.5:23141353 chr05:023141353 0 W/23141353-23141353 FN795-S Single Base Substitution C-T INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2181-S.SNP.5:23144770 chr05:023144770 0 W/23144770-23144770 FN2181-S SNP T -> C AC=1;AN=190;BQB=0.869848;DP=4877;DP4=2001,2525,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.47932e-09;MQSB=0.983415;RPB=0.942015;SGB=38.983;VDB=0.797659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.5:23154461 chr05:023154461 0 W/23154461-23154461 FN3115-S SNP T -> C AC=1;AN=184;BQB=0.997501;DP=1961;DP4=862,966,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.198368;MQB=0.585826;MQSB=0;RPB=0.840639;SGB=46.3132;VDB=0.981409;EFF=INTRON(MODIFIER||||384|LOC_Os05g39470|protein_coding|CODING|LOC_Os05g39470.1|1|1) FN3312-S.SNP.5:23156941 chr05:023156941 0 W/23156941-23156941 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.698733;DP=3266;DP4=1628,1471,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57771e-07;MQSB=0.999454;RPB=0.999989;SGB=56.8786;VDB=0.964047;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.5:23157382 chr05:023157382 0 W/23157382-23157382 FN3966-S SNP G -> A AC=2;AN=168;BQB=0.979426;DP=2949;DP4=1536,1192,14,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.96968e-15;MQSB=0.756524;RPB=0.48727;SGB=24.2221;VDB=0.0723478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.5:23159277 chr05:023159277 0 W/23159277-23159277 FN1234-S Single Base Substitution G-T INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN4069-S.SNP.5:23161901 chr05:023161901 0 W/23161901-23161901 FN4069-S SNP C -> T AC=2;AN=182;BQB=0.854515;DP=2192;DP4=548,1530,12,44;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.98201e-30;MQSB=0.919156;RPB=0.991529;SGB=209.105;VDB=0.250148;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.5:23163552 chr05:023163552 0 W/23163552-23163552 FN-52 Single Base Substitution G-T INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN-52.SNP.5:23163554 chr05:023163554 0 W/23163554-23163554 FN-52 Single Base Substitution A-T INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN864-S.SNP.5:23175989 chr05:023175989 0 W/23175989-23175989 FN864-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g39490 expressed protein SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN1036-S.SNP.5:23177607 chr05:023177607 0 W/23177607-23177607 FN1036-S Single Base Substitution T-A INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN2612-S.SNP.5:23186233 chr05:023186233 0 W/23186233-23186233 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.420819;DP=4161;DP4=2042,1927,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.43513e-12;MQSB=0.999666;RPB=0.537623;SGB=81.7147;VDB=0.872769;EFF=INTRON(MODIFIER||||72|LOC_Os05g39510|protein_coding|CODING|LOC_Os05g39510.1|1|1) FN-8.SNP.5:23192086 chr05:023192086 0 W/23192086-23192086 FN-8 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g39520 methyltransferase, putative, expressed SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN2588-S.SNP.5:23201321 chr05:023201321 0 W/23201321-23201321 FN2588-S SNP C -> T AC=2;AN=198;BQB=0.443293;DP=4027;DP4=1869,1951,18,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.9364e-17;MQSB=0.764458;RPB=0.997906;SGB=127.666;VDB=0.813206;EFF=UTR_5_PRIME(MODIFIER||2455||316|LOC_Os05g39530|protein_coding|CODING|LOC_Os05g39530.1|1|1),UTR_5_PRIME(MODIFIER||2455||314|LOC_Os05g39530|protein_coding|CODING|LOC_Os05g39530.2|1|1) FN2328.SNP.5:23203846 chr05:023203846 0 W/23203846-23203846 FN2328 SNP C -> A AC=2;AN=192;BQB=0.329616;DP=4946;DP4=2083,2509,30,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.46299e-31;MQSB=0.951676;RPB=0.215412;SGB=12.8844;VDB=0.320346;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.5:23206183 chr05:023206183 0 W/23206183-23206183 FN934-S Single Base Substitution T-C INTRON HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1042-S.SNP.5:23208358 chr05:023208358 0 W/23208358-23208358 FN1042-S Single Base Substitution T-G INTRON HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3306-S.SNP.5:23222048 chr05:023222048 0 W/23222048-23222048 FN3306-S SNP G -> A AC=2;AN=184;BQB=0.377461;DP=2902;DP4=1266,1468,14,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.53487e-14;MQSB=0.621634;RPB=0.35246;SGB=109.705;VDB=0.895225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.5:23226998 chr05:023226998 0 W/23226998-23226998 FN2407 SNP C -> T AC=2;AN=200;BQB=0.968339;DP=3435;DP4=1428,1819,5,18;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.0841339;MQB=0.391321;MQSB=0;RPB=0.828064;SGB=100.316;VDB=0.869283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S584L|1022|LOC_Os05g39570|protein_coding|CODING|LOC_Os05g39570.1|2|1) FN459-S.SNP.5:23226998 chr05:023226998 0 W/23226998-23226998 FN459-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g39570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1232-S.SNP.5:23238291 chr05:023238291 0 W/23238291-23238291 FN1232-S Single Base Substitution C-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2789-S.SNP.5:23244382 chr05:023244382 0 W/23244382-23244382 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.846362;DP=4453;DP4=2187,1954,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.47199e-09;MQSB=0.767414;RPB=0.779093;SGB=47.3393;VDB=0.987083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.5:23264000 chr05:023264000 0 W/23264000-23264000 FN3549-S SNP G -> A AC=2;AN=188;BQB=0.793534;DP=3530;DP4=1765,1675,15,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.90897e-17;MQSB=0.990854;RPB=0.962728;SGB=117.128;VDB=0.792705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1048C|1391|LOC_Os05g39620|protein_coding|CODING|LOC_Os05g39620.1|6|1) FN3910-S.SNP.5:23265994 chr05:023265994 0 W/23265994-23265994 FN3910-S SNP A -> T AC=1;AN=158;BQB=0.769532;DP=2968;DP4=1646,1154,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0121294;MQB=0.0379256;MQSB=1.17787e-11;RPB=0.377464;SGB=19.0798;VDB=0.268133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C591S|1391|LOC_Os05g39620|protein_coding|CODING|LOC_Os05g39620.1|4|1) FN3439-S.SNP.5:23267205 chr05:023267205 0 W/23267205-23267205 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.407305;DP=3895;DP4=1955,1680,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000513479;MQB=1.33739e-05;MQSB=0.847039;RPB=0.941638;SGB=23.2751;VDB=0.808337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G273D|1391|LOC_Os05g39620|protein_coding|CODING|LOC_Os05g39620.1|2|1) FN1413-S.SNP.5:23272963 chr05:023272963 0 W/23272963-23272963 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2421.SNP.5:23284232 chr05:023284232 0 W/23284232-23284232 FN2421 SNP C -> A AC=1;AN=200;BQB=0.20574;DP=4566;DP4=2303,2003,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.9227e-05;MQSB=0.962731;RPB=0.860677;SGB=13.8539;VDB=0.262875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N223K|270|LOC_Os05g39660|protein_coding|CODING|LOC_Os05g39660.1|3|1) FN2438.SNP.5:23302715 chr05:023302715 0 W/23302715-23302715 FN2438 SNP G -> T AC=1;AN=200;BQB=0.941971;DP=4786;DP4=1977,2437,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6216e-14;MQSB=0.87886;RPB=0.699021;SGB=-40.8432;VDB=0.4272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.5:23303592 chr05:023303592 0 W/23303592-23303592 FN2709-S SNP C -> T AC=1;AN=200;BQB=0.393652;DP=4293;DP4=1968,1965,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000206382;MQSB=0.632447;RPB=0.972553;SGB=18.639;VDB=0.322974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.5:23308187 chr05:023308187 0 W/23308187-23308187 FN3821-S SNP C -> T AC=1;AN=190;BQB=0.977852;DP=3030;DP4=1614,1268,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16302e-09;MQSB=0.161107;RPB=0.867717;SGB=53.8699;VDB=0.735632;EFF=UTR_3_PRIME(MODIFIER||116||171|LOC_Os05g39710|protein_coding|CODING|LOC_Os05g39710.1|1|1) FN-356.SNP.5:23308557 chr05:023308557 0 W/23308557-23308557 FN-356 Single Base Substitution A-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1313-S.SNP.5:23312075 chr05:023312075 0 W/23312075-23312075 FN1313-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g39720 WRKY70, expressed SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2412.SNP.5:23319220 chr05:023319220 0 W/23319220-23319220 FN2412 SNP G -> A AC=1;AN=200;BQB=0.750698;DP=4907;DP4=2324,2356,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.87598e-10;MQSB=0.798922;RPB=0.522858;SGB=39.9056;VDB=0.351526;EFF=UTR_5_PRIME(MODIFIER||123||554|LOC_Os05g39730|protein_coding|CODING|LOC_Os05g39730.1|2|1) FN431-S.SNP.5:23339380 chr05:023339380 0 W/23339380-23339380 FN431-S Single Base Substitution C-T INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN3763-S.SNP.5:23344569 chr05:023344569 0 W/23344569-23344569 FN3763-S SNP C -> T AC=1;AN=190;BQB=0.926427;DP=2829;DP4=1485,1198,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53091e-07;MQSB=0.557281;RPB=0.99101;SGB=28.9929;VDB=0.0491895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.5:23345821 chr05:023345821 0 W/23345821-23345821 FN1232-S Single Base Substitution C-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2314.SNP.5:23346747 chr05:023346747 0 W/23346747-23346747 FN2314 SNP C -> T AC=1;AN=192;BQB=0.363828;DP=5229;DP4=2252,2560,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=2.4439e-13;MQSB=0.0146681;RPB=0.98173;SGB=-70.2434;VDB=0.558122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.5:23346753 chr05:023346753 0 W/23346753-23346753 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.623138;DP=4611;DP4=1958,2315,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=5.16459e-07;MQSB=0.388464;RPB=0.0726109;SGB=7.75428;VDB=0.740547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.5:23346919 chr05:023346919 0 W/23346919-23346919 FN2128-S SNP G -> T AC=2;AN=168;BQB=0.728123;DP=3575;DP4=1572,1944,11,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.46894e-15;MQSB=0.995391;RPB=0.904157;SGB=58.647;VDB=0.820373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.5:23348767 chr05:023348767 0 W/23348767-23348767 FN-106 Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3903-S.SNP.5:23350781 chr05:023350781 0 W/23350781-23350781 FN3903-S SNP C -> T AC=1;AN=158;BQB=0.968488;DP=2464;DP4=1120,1264,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.12082e-05;MQSB=0.991429;RPB=0.696562;SGB=38.3284;VDB=0.113645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.5:23363757 chr05:023363757 0 W/23363757-23363757 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.994803;DP=2125;DP4=1180,827,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.60058e-08;MQSB=0.115683;RPB=0.999917;SGB=35.7479;VDB=0.923771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.5:23366997 chr05:023366997 0 W/23366997-23366997 FN2477 SNP G -> A AC=1;AN=200;BQB=0.80029;DP=4267;DP4=1979,1981,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01971e-14;MQSB=0.755204;RPB=0.276077;SGB=76.3213;VDB=0.722787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.5:23372270 chr05:023372270 0 W/23372270-23372270 FN3853-S SNP A -> G AC=1;AN=158;BQB=0.93738;DP=1536;DP4=602,817,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0240885;MQB=0.013763;MQSB=0.000946227;RPB=0.399094;SGB=20.5959;VDB=0.364077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.5:23376295 chr05:023376295 0 W/23376295-23376295 FN2264-S SNP C -> T AC=2;AN=190;BQB=0.971558;DP=5026;DP4=2269,2440,11,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.28518e-15;MQSB=0.98977;RPB=0.261072;SGB=27.4193;VDB=0.560399;EFF=INTRON(MODIFIER||||710|LOC_Os05g39790|protein_coding|CODING|LOC_Os05g39790.1|3|1) FN3415-S.SNP.5:23382754 chr05:023382754 0 W/23382754-23382754 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.989215;DP=2438;DP4=1315,1044,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.76688e-06;MQSB=0.93402;RPB=0.843847;SGB=35.1773;VDB=0.377003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.5:23383618 chr05:023383618 0 W/23383618-23383618 FN1163-S Single Base Substitution C-G INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3369-S.SNP.5:23388665 chr05:023388665 0 W/23388665-23388665 FN3369-S SNP C -> T AC=2;AN=184;BQB=0.966818;DP=3493;DP4=1253,2102,18,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.33493e-23;MQSB=0.909564;RPB=0.599351;SGB=184.396;VDB=0.550801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P541L|561|LOC_Os05g39800|protein_coding|CODING|LOC_Os05g39800.1|2|1) FN1026-S.SNP.5:23389221 chr05:023389221 0 W/23389221-23389221 FN1026-S Single Base Substitution A-G INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2771-S.SNP.5:23390839 chr05:023390839 0 W/23390839-23390839 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.578515;DP=3747;DP4=1840,1654,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00880705;MQB=9.41278e-09;MQSB=0.257935;RPB=0.812557;SGB=52.7004;VDB=0.713604;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.5:23391439 chr05:023391439 0 W/23391439-23391439 FN4041-S SNP C -> G AC=1;AN=168;BQB=0.91677;DP=2928;DP4=1498,1326,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.290642;MQB=0.85771;MQSB=0;RPB=0.613939;SGB=1.32907;VDB=0.541492;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.5:23393020 chr05:023393020 0 W/23393020-23393020 W360-2S-2 Single Base Substitution G-T INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN-62.SNP.5:23402236 chr05:023402236 0 W/23402236-23402236 FN-62 Single Base Substitution A-G INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2403.SNP.5:23402724 chr05:023402724 0 W/23402724-23402724 FN2403 SNP C -> T AC=1;AN=200;BQB=0.0152122;DP=5160;DP4=2455,2117,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.37134e-12;MQSB=0.415359;RPB=0.85483;SGB=-202.659;VDB=0.532916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.5:23410154 chr05:023410154 0 W/23410154-23410154 FN2307 SNP T -> A AC=2;AN=192;BQB=0.752987;DP=4816;DP4=2247,2146,28,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000415282;MQB=4.24211e-29;MQSB=0.715848;RPB=0.39573;SGB=178.79;VDB=0.53095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.5:23410155 chr05:023410155 0 W/23410155-23410155 FN2307 SNP T -> A AC=2;AN=192;BQB=0.817519;DP=4796;DP4=2275,2139,30,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000417014;MQB=3.96218e-30;MQSB=0.820804;RPB=0.649607;SGB=236.349;VDB=0.616185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.5:23414438 chr05:023414438 0 W/23414438-23414438 FN2433 SNP T -> C AC=1;AN=200;BQB=0.804815;DP=4754;DP4=2326,2139,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210349;MQB=7.07906e-15;MQSB=0.989282;RPB=0.989632;SGB=118.737;VDB=0.0864267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.5:23414631 chr05:023414631 0 W/23414631-23414631 FN2667-S SNP A -> C AC=2;AN=200;BQB=0.5928;DP=4207;DP4=1774,2235,15,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=8.60537e-17;MQSB=0.203986;RPB=0.0688365;SGB=73.7728;VDB=0.321686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.5:23417403 chr05:023417403 0 W/23417403-23417403 FN2445 SNP T -> C AC=1;AN=200;BQB=0.778197;DP=4911;DP4=2030,2487,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.04154e-14;MQSB=0.8034;RPB=0.862801;SGB=76.3213;VDB=0.156987;EFF=INTRON(MODIFIER||||566|LOC_Os05g39840|protein_coding|CODING|LOC_Os05g39840.1|1|1) FN2095-S.SNP.5:23420902 chr05:023420902 0 W/23420902-23420902 FN2095-S SNP G -> T AC=1;AN=168;BQB=0.170318;DP=3971;DP4=1773,2159,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49195e-07;MQSB=0.989727;RPB=0.950191;SGB=-63.3606;VDB=0.988896;EFF=SPLICE_SITE_DONOR(HIGH||||770|LOC_Os05g39850|protein_coding|CODING|LOC_Os05g39850.1|4|1),INTRON(MODIFIER||||770|LOC_Os05g39850|protein_coding|CODING|LOC_Os05g39850.1|4|1);LOF=(LOC_Os05g39850|LOC_Os05g39850|1|1.00) FN432-S.SNP.5:23426168 chr05:023426168 0 W/23426168-23426168 FN432-S Single Base Substitution G-A INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3628-S.SNP.5:23434628 chr05:023434628 0 W/23434628-23434628 FN3628-S SNP C -> A AC=1;AN=190;BQB=0.858985;DP=2256;DP4=1037,1095,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.83012e-05;MQSB=0.782119;RPB=0.923243;SGB=26.3271;VDB=0.806316;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.5:23440924 chr05:023440924 0 W/23440924-23440924 FN4178-S SNP C -> A AC=1;AN=170;BQB=0.991749;DP=2597;DP4=1371,1149,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.96381e-12;MQSB=0.881851;RPB=0.570553;SGB=87.856;VDB=0.727057;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.5:23445302 chr05:023445302 0 W/23445302-23445302 FN4040-S SNP C -> A AC=1;AN=168;BQB=0.996271;DP=3040;DP4=1372,1500,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000328947;MQB=7.42443e-09;MQSB=0.995659;RPB=0.885604;SGB=65.4653;VDB=0.0220288;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.5:23458833 chr05:023458833 0 W/23458833-23458833 FN1263-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g39920 retrotransposon protein, putative, unclassified, expressed SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN_777-2-1.SNP.5:23459490 chr05:023459490 0 W/23459490-23459490 FN_777-2-1 Single Base Substitution G-C HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN-148.SNP.5:23466547 chr05:023466547 0 W/23466547-23466547 FN-148 Single Base Substitution T-G INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1636-S.SNP.5:23469347 chr05:023469347 0 W/23469347-23469347 FN1636-S Single Base Substitution G-A INTERGENIC Homo SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2273-S.SNP.5:23472746 chr05:023472746 0 W/23472746-23472746 FN2273-S SNP A -> T AC=2;AN=190;BQB=0.793197;DP=4934;DP4=2202,2383,19,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.77848e-23;MQSB=0.780782;RPB=0.402993;SGB=2.28657;VDB=0.686555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.5:23474715 chr05:023474715 0 W/23474715-23474715 FN1707-S SNP C -> T AC=1;AN=188;BQB=0.841637;DP=3061;DP4=1291,1710,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22761e-11;MQSB=0.999091;RPB=0.99567;SGB=17.8846;VDB=0.455241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.5:23475654 chr05:023475654 0 W/23475654-23475654 FN2350 SNP A -> G AC=1;AN=192;BQB=0.890962;DP=4565;DP4=2059,1984,4,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66515e-10;MQSB=0.776205;RPB=0.601542;SGB=7.3548;VDB=0.0302648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.5:23479082 chr05:023479082 0 W/23479082-23479082 FN1481-S Single Base Substitution A-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3446-S.SNP.5:23479375 chr05:023479375 0 W/23479375-23479375 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.925468;DP=2484;DP4=1124,1280,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000182852;MQSB=0.999832;RPB=0.423749;SGB=30.6558;VDB=0.251998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.5:23480589 chr05:023480589 0 W/23480589-23480589 FN2566-S SNP T -> A AC=1;AN=198;BQB=0.203693;DP=4385;DP4=2184,1977,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.48207e-05;MQSB=0.702555;RPB=0.236422;SGB=25.7687;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.5:23493360 chr05:023493360 0 W/23493360-23493360 FN1679-S SNP G -> T AC=2;AN=188;BQB=0.994987;DP=3068;DP4=1737,1268,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.51335e-20;MQSB=0.82689;RPB=0.329896;SGB=158.018;VDB=0.0386431;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.5:23497903 chr05:023497903 0 W/23497903-23497903 FN4107-S SNP C -> G AC=2;AN=182;BQB=0.859515;DP=2445;DP4=972,1191,6,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.98678e-07;MQSB=0.534613;RPB=0.994056;SGB=57.644;VDB=0.672996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.5:23499908 chr05:023499908 0 W/23499908-23499908 FN2418 SNP A -> T AC=1;AN=200;BQB=0.783024;DP=4846;DP4=2294,2270,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56847e-06;MQSB=0.907648;RPB=0.694834;SGB=22.2439;VDB=0.592572;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.5:23507918 chr05:023507918 0 W/23507918-23507918 FN-296 Single Base Substitution C-A INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN2532-S.SNP.5:23513317 chr05:023513317 0 W/23513317-23513317 FN2532-S SNP G -> T AC=1;AN=198;BQB=0.857144;DP=3576;DP4=1744,1641,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000279642;MQB=8.96279e-10;MQSB=0.841132;RPB=0.807846;SGB=72.5245;VDB=0.802805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.5:23519537 chr05:023519537 0 W/23519537-23519537 FN3889-S SNP A -> C AC=1;AN=158;BQB=0.922344;DP=2338;DP4=1044,1205,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.88013e-09;MQSB=0.986203;RPB=0.95169;SGB=55.806;VDB=0.917907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E334A|371|LOC_Os05g40040|protein_coding|CODING|LOC_Os05g40040.1|4|1) FN1757-S.SNP.5:23523603 chr05:023523603 0 W/23523603-23523603 FN1757-S SNP T -> G AC=2;AN=188;BQB=0.572256;DP=3237;DP4=1481,1689,20,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000308928;MQB=2.31065e-22;MQSB=0.998183;RPB=0.48778;SGB=1.84238;VDB=0.254394;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.5:23526877 chr05:023526877 0 W/23526877-23526877 FN695-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g40050 receptor-like protein kinase 2 precursor, putative, expressed SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1128-S.SNP.5:23541874 chr05:023541874 0 W/23541874-23541874 FN1128-S Single Base Substitution T-A INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1748-S.SNP.5:23541874 chr05:023541874 0 W/23541874-23541874 FN1748-S SNP T -> A AC=2;AN=188;BQB=0.736215;DP=3394;DP4=1949,1396,24,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.00212e-21;MQSB=0.969546;RPB=0.642308;SGB=82.0286;VDB=0.262005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.5:23541874 chr05:023541874 0 W/23541874-23541874 FN2500 SNP T -> A AC=1;AN=200;BQB=0.590617;DP=4899;DP4=2221,2418,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.58027e-19;MQSB=0.999079;RPB=0.717398;SGB=97.9523;VDB=0.35899;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.5:23541874 chr05:023541874 0 W/23541874-23541874 FN4143-S SNP T -> A AC=1;AN=170;BQB=0.980027;DP=2467;DP4=926,1477,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.94589e-07;MQSB=0.989194;RPB=0.316373;SGB=31.4354;VDB=0.056073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.5:23542626 chr05:023542626 0 W/23542626-23542626 FN1634-S Single Base Substitution C-T INTERGENIC Homo SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN929-S.SNP.5:23543211 chr05:023543211 0 W/23543211-23543211 FN929-S Single Base Substitution A-C INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN3325-S.SNP.5:23543286 chr05:023543286 0 W/23543286-23543286 FN3325-S SNP G -> C AC=1;AN=184;BQB=0.644376;DP=2982;DP4=1444,1440,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4307e-08;MQSB=0.998345;RPB=0.992461;SGB=80.3949;VDB=0.690444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.5:23544427 chr05:023544427 0 W/23544427-23544427 FN1453-S Single Base Substitution T-A INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2611-S.SNP.5:23561600 chr05:023561600 0 W/23561600-23561600 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.671503;DP=4667;DP4=2258,2142,30,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06315e-30;MQSB=0.921938;RPB=0.765924;SGB=-48.7398;VDB=0.8791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.5:23572057 chr05:023572057 0 W/23572057-23572057 FN2531-S SNP A -> T AC=2;AN=198;BQB=0.742813;DP=4098;DP4=2057,1855,15,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.8069e-20;MQSB=0.740938;RPB=0.346107;SGB=115.647;VDB=0.71181;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L42*|166|LOC_Os05g40120|protein_coding|CODING|LOC_Os05g40120.1|1|1);LOF=(LOC_Os05g40120|LOC_Os05g40120|1|1.00);NMD=(LOC_Os05g40120|LOC_Os05g40120|1|1.00) FN2480.SNP.5:23573871 chr05:023573871 0 W/23573871-23573871 FN2480 SNP A -> G AC=1;AN=200;BQB=0.899818;DP=4063;DP4=2046,1520,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.61069e-09;MQSB=0.518721;RPB=0.999322;SGB=47.4799;VDB=0.0574661;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.5:23595838 chr05:023595838 0 W/23595838-23595838 FN885-S Single Base Substitution A-C INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN1464-S.SNP.5:23607054 chr05:023607054 0 W/23607054-23607054 FN1464-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os05g40200 inactive receptor kinase At2g26730 precursor, putative, expressed SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1440-S.SNP.5:23612939 chr05:023612939 0 W/23612939-23612939 FN1440-S Single Base Substitution A-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2327.SNP.5:23617505 chr05:023617505 0 W/23617505-23617505 FN2327 SNP A -> G AC=1;AN=192;BQB=0.939928;DP=4790;DP4=1817,2635,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208768;MQB=3.13277e-07;MQSB=0.363163;RPB=0.844177;SGB=7.3548;VDB=0.980939;EFF=UTR_3_PRIME(MODIFIER||182||105|LOC_Os05g40212|protein_coding|CODING|LOC_Os05g40212.1|1|1) FN2625-S.SNP.5:23621168 chr05:023621168 0 W/23621168-23621168 FN2625-S SNP C -> T AC=2;AN=200;BQB=0.0147442;DP=4678;DP4=2276,2079,36,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.72865e-36;MQSB=0.995929;RPB=0.847269;SGB=289.128;VDB=0.413763;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.5:23623926 chr05:023623926 0 W/23623926-23623926 FN470-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g40220 transposon protein, putative, unclassified, expressed SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3758-S.SNP.5:23630318 chr05:023630318 0 W/23630318-23630318 FN3758-S SNP G -> A AC=1;AN=190;BQB=0.949782;DP=2672;DP4=1280,1281,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76803e-08;MQSB=0.945142;RPB=0.793487;SGB=53.6492;VDB=0.526917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.5:23633004 chr05:023633004 0 W/23633004-23633004 FN2150-S SNP T -> C AC=1;AN=168;BQB=0.00141483;DP=2822;DP4=1159,1636,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000552047;MQSB=0.931977;RPB=0.49267;SGB=-82.6471;VDB=0.766256;EFF=INTRON(MODIFIER||||231|LOC_Os05g40230|protein_coding|CODING|LOC_Os05g40230.1|3|1) FN2265-S.SNP.5:23640298 chr05:023640298 0 W/23640298-23640298 FN2265-S SNP C -> A AC=1;AN=190;BQB=0.99999;DP=4420;DP4=1856,2295,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1978e-10;MQSB=0.794891;RPB=0.689202;SGB=80.9724;VDB=0.382259;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C33*|331|LOC_Os05g40250|protein_coding|CODING|LOC_Os05g40250.1|1|1);LOF=(LOC_Os05g40250|LOC_Os05g40250|1|1.00);NMD=(LOC_Os05g40250|LOC_Os05g40250|1|1.00) FN2295.SNP.5:23648533 chr05:023648533 0 W/23648533-23648533 FN2295 SNP A -> G AC=1;AN=192;BQB=0.984742;DP=5351;DP4=2533,2537,19,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.31096e-21;MQSB=0.968564;RPB=0.975459;SGB=80.2009;VDB=0.943179;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.5:23657450 chr05:023657450 0 W/23657450-23657450 FN963-S Single Base Substitution A-T SPLICE_SITE_ACCEPTOR HOMO LOC_Os05g40270 expressed protein SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN963-S.SNP.5:23657451 chr05:023657451 0 W/23657451-23657451 FN963-S Single Base Substitution G-T SPLICE_SITE_ACCEPTOR HOMO LOC_Os05g40270 expressed protein SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN-189.SNP.5:23660510 chr05:023660510 0 W/23660510-23660510 FN-189 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g40270 expressed protein SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN432-S.SNP.5:23660695 chr05:023660695 0 W/23660695-23660695 FN432-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g40270 expressed protein SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2499.SNP.5:23662901 chr05:023662901 0 W/23662901-23662901 FN2499 SNP C -> T AC=2;AN=200;BQB=0.970547;DP=4899;DP4=2238,2394,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83528e-22;MQSB=0.950308;RPB=0.482736;SGB=178.604;VDB=0.20226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E232K|279|LOC_Os05g40280|protein_coding|CODING|LOC_Os05g40280.1|7|1),UTR_3_PRIME(MODIFIER||1891||735|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.9|20|1),UTR_3_PRIME(MODIFIER||941||840|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.8|21|1),UTR_3_PRIME(MODIFIER||675||285|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.12|3|1),UTR_3_PRIME(MODIFIER||675||952|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.1|21|1),UTR_3_PRIME(MODIFIER||675||952|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.2|21|1),UTR_3_PRIME(MODIFIER||675||952|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.3|21|1),UTR_3_PRIME(MODIFIER||675||952|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.4|20|1),UTR_3_PRIME(MODIFIER||675||952|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.5|21|1),UTR_3_PRIME(MODIFIER||675||916|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.6|21|1),UTR_3_PRIME(MODIFIER||675||845|LOC_Os05g40270|protein_coding|CODING|LOC_Os05g40270.7|20|1) FN819-S.SNP.5:23672689 chr05:023672689 0 W/23672689-23672689 FN819-S Single Base Substitution G-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3692-S.SNP.5:23674083 chr05:023674083 0 W/23674083-23674083 FN3692-S SNP T -> C AC=1;AN=190;BQB=0.934688;DP=2902;DP4=1392,1363,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.81579e-05;MQSB=0.994259;RPB=0.726557;SGB=35.4339;VDB=0.565813;EFF=INTRON(MODIFIER||||282|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.1|4|1),INTRON(MODIFIER||||281|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.2|4|1),INTRON(MODIFIER||||233|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.3|4|1) FN-243.SNP.5:23675654 chr05:023675654 0 W/23675654-23675654 FN-243 Single Base Substitution A-G INTRON HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN3652-S.SNP.5:23676720 chr05:023676720 0 W/23676720-23676720 FN3652-S SNP C -> T AC=2;AN=190;BQB=0.000235336;DP=2904;DP4=1176,1546,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68766e-05;MQSB=0.377358;RPB=0.0180207;SGB=140.173;VDB=0.456932;EFF=INTRON(MODIFIER||||282|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.1|1|1),INTRON(MODIFIER||||281|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.2|1|1),INTRON(MODIFIER||||233|LOC_Os05g40290|protein_coding|CODING|LOC_Os05g40290.3|1|1) FN1688-S.SNP.5:23691738 chr05:023691738 0 W/23691738-23691738 FN1688-S SNP G -> A AC=1;AN=188;BQB=0.118274;DP=3696;DP4=1970,1688,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.84432e-06;MQSB=0.967167;RPB=0.833636;SGB=5.5382;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.5:23693612 chr05:023693612 0 W/23693612-23693612 FN3592-S SNP G -> A AC=2;AN=188;BQB=0.596402;DP=2966;DP4=1661,1195,12,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.4126e-15;MQSB=0.676869;RPB=0.725911;SGB=61.6823;VDB=0.195008;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E43K|389|LOC_Os05g40320|protein_coding|CODING|LOC_Os05g40320.1|2|1) FN1686-S.SNP.5:23707047 chr05:023707047 0 W/23707047-23707047 FN1686-S SNP G -> T AC=2;AN=188;BQB=0.448891;DP=3516;DP4=1460,1994,24,27;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=0.0845592;MQSB=0.0318729;RPB=0.280176;SGB=-107.06;VDB=0.96908;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.5:23712049 chr05:023712049 0 W/23712049-23712049 FN354-S Single Base Substitution T-C INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN513-S.SNP.5:23713355 chr05:023713355 0 W/23713355-23713355 FN513-S Single Base Substitution C-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1478-S.SNP.5:23723271 chr05:023723271 0 W/23723271-23723271 FN1478-S Single Base Substitution G-A INTRON HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2086-S.SNP.5:23726041 chr05:023726041 0 W/23726041-23726041 FN2086-S SNP C -> T AC=2;AN=168;BQB=0.677694;DP=2641;DP4=1168,1353,30,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.09256e-24;MQSB=0.805947;RPB=0.859657;SGB=151.895;VDB=0.00650692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.5:23726251 chr05:023726251 0 W/23726251-23726251 FN1563-S Single Base Substitution T-C INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1346-S.SNP.5:23727165 chr05:023727165 0 W/23727165-23727165 FN1346-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3983-S.SNP.5:23735506 chr05:023735506 0 W/23735506-23735506 FN3983-S SNP A -> G AC=1;AN=168;BQB=0.925993;DP=2618;DP4=1059,1440,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.89565e-07;MQSB=0.859982;RPB=0.696581;SGB=12.4615;VDB=0.392155;EFF=INTRON(MODIFIER||||577|LOC_Os05g40384|protein_coding|CODING|LOC_Os05g40384.1|1|1) FN751-S.SNP.5:23757604 chr05:023757604 0 W/23757604-23757604 FN751-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g40440 retrotransposon protein, putative, LINE subclass, expressed SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. W596-1-1.SNP.5:23760243 chr05:023760243 0 W/23760243-23760243 W596-1-1 Single Base Substitution C-T INTRON HOMO SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN2547-S.SNP.5:23761654 chr05:023761654 0 W/23761654-23761654 FN2547-S SNP C -> A AC=1;AN=198;BQB=0.996199;DP=3526;DP4=1709,1580,1,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000123208;MQSB=0.898917;RPB=0.974205;SGB=14.9842;VDB=0.715177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.5:23762415 chr05:023762415 0 W/23762415-23762415 FN-174 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3506-S.SNP.5:23766552 chr05:023766552 0 W/23766552-23766552 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.966149;DP=3028;DP4=1362,1595,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.84276e-07;MQSB=0.972953;RPB=0.545659;SGB=44.4357;VDB=0.432711;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L537|555|LOC_Os05g40460|protein_coding|CODING|LOC_Os05g40460.1|4|1) FN3413-S.SNP.5:23770733 chr05:023770733 0 W/23770733-23770733 FN3413-S SNP A -> G AC=2;AN=184;BQB=0.965038;DP=2878;DP4=1406,1287,13,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00833912;MQB=1.22536e-08;MQSB=0.34614;RPB=0.928449;SGB=18.9766;VDB=0.759814;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M68T|388|LOC_Os05g40470|protein_coding|CODING|LOC_Os05g40470.1|1|1) FN484-S.SNP.5:23775389 chr05:023775389 0 W/23775389-23775389 FN484-S Single Base Substitution C-G INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2136-S.SNP.5:23775682 chr05:023775682 0 W/23775682-23775682 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.998851;DP=2819;DP4=1271,1491,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0393757;MQB=0.248825;MQSB=1.24415e-11;RPB=0.992021;SGB=2.75988;VDB=0.362756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.5:23776174 chr05:023776174 0 W/23776174-23776174 FN2692-S SNP C -> G AC=1;AN=200;BQB=0.429492;DP=4626;DP4=2386,2018,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10374e-07;MQSB=0.7219;RPB=0.352132;SGB=58.8698;VDB=0.171659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.5:23780553 chr05:023780553 0 W/23780553-23780553 FN1690-S SNP G -> A AC=1;AN=188;BQB=0.0253384;DP=3365;DP4=2349,982,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.82373e-07;MQSB=0.951317;RPB=0.989528;SGB=-37.8212;VDB=0.0202681;EFF=INTRON(MODIFIER||||741|LOC_Os05g40490|protein_coding|CODING|LOC_Os05g40490.1|1|1) FN558-S.SNP.5:23782235 chr05:023782235 0 W/23782235-23782235 FN558-S Single Base Substitution A-G INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3628-S.SNP.5:23792989 chr05:023792989 0 W/23792989-23792989 FN3628-S SNP A -> G AC=1;AN=190;BQB=0.659703;DP=3043;DP4=1652,1107,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.58034e-06;MQSB=0.997739;RPB=0.835671;SGB=21.1058;VDB=0.453798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M401T|403|LOC_Os05g40520|protein_coding|CODING|LOC_Os05g40520.1|1|1) FN769-S.SNP.5:23799208 chr05:023799208 0 W/23799208-23799208 FN769-S Single Base Substitution C-T INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1047-S.SNP.5:23816746 chr05:023816746 0 W/23816746-23816746 FN1047-S Single Base Substitution C-A INTERGENIC HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-110.SNP.5:23816762 chr05:023816762 0 W/23816762-23816762 FN-110 Single Base Substitution T-A INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-110.SNP.5:23816763 chr05:023816763 0 W/23816763-23816763 FN-110 Single Base Substitution C-T INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3355-S.SNP.5:23820167 chr05:023820167 0 W/23820167-23820167 FN3355-S SNP C -> A AC=1;AN=184;BQB=0.920979;DP=2988;DP4=1364,1115,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.15297e-06;MQSB=0.798542;RPB=0.637128;SGB=15.7097;VDB=0.83933;EFF=INTERGENIC(MODIFIER||||||||||1) FN-62.SNP.5:23823689 chr05:023823689 0 W/23823689-23823689 FN-62 Single Base Substitution T-C INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN-62.SNP.5:23823719 chr05:023823719 0 W/23823719-23823719 FN-62 Single Base Substitution G-T INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3567-S.SNP.5:23828191 chr05:023828191 0 W/23828191-23828191 FN3567-S SNP T -> C AC=1;AN=186;BQB=0.994027;DP=2998;DP4=1678,1225,9,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.55334e-09;MQSB=0.950613;RPB=0.311599;SGB=67.1521;VDB=0.294923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.5:23837168 chr05:023837168 0 W/23837168-23837168 FN2304 SNP G -> A AC=1;AN=192;BQB=0.868929;DP=4390;DP4=2093,2036,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.18546e-07;MQSB=0.924322;RPB=0.856768;SGB=46.9087;VDB=0.73702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.5:23839510 chr05:023839510 0 W/23839510-23839510 FN1176-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1176-S.SNP.5:23839511 chr05:023839511 0 W/23839511-23839511 FN1176-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1265-S.SNP.5:23843401 chr05:023843401 0 W/23843401-23843401 FN1265-S Single Base Substitution T-C INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN-182.SNP.5:23848104 chr05:023848104 0 W/23848104-23848104 FN-182 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-272.SNP.5:23848882 chr05:023848882 0 W/23848882-23848882 FN-272 Single Base Substitution T-C INTRON HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN-362.SNP.5:23854540 chr05:023854540 0 W/23854540-23854540 FN-362 Single Base Substitution G-T INTRON HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1519-S.SNP.5:23858587 chr05:023858587 0 W/23858587-23858587 FN1519-S Single Base Substitution A-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN-406.SNP.5:23859422 chr05:023859422 0 W/23859422-23859422 FN-406 Single Base Substitution A-T INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-21.SNP.5:23859933 chr05:023859933 0 W/23859933-23859933 FN-21 Single Base Substitution T-C INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN1257-S.SNP.5:23860418 chr05:023860418 0 W/23860418-23860418 FN1257-S Single Base Substitution C-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1257-S.SNP.5:23860423 chr05:023860423 0 W/23860423-23860423 FN1257-S Single Base Substitution A-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN4230-S.SNP.5:23869848 chr05:023869848 0 W/23869848-23869848 FN4230-S SNP T -> A AC=1;AN=170;BQB=0.963656;DP=2165;DP4=1104,998,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.39881e-07;MQSB=0.89519;RPB=0.672115;SGB=38.987;VDB=0.826152;EFF=INTERGENIC(MODIFIER||||||||||1) FN4230-S.SNP.5:23869853 chr05:023869853 0 W/23869853-23869853 FN4230-S SNP C -> G AC=1;AN=170;BQB=0.986204;DP=2188;DP4=1112,1034,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.41053e-06;MQSB=0.857323;RPB=0.935911;SGB=34.5445;VDB=0.763665;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.5:23888171 chr05:023888171 0 W/23888171-23888171 FN519-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN621-S.SNP.5:23888499 chr05:023888499 0 W/23888499-23888499 FN621-S Single Base Substitution C-A INTRON HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2412.SNP.5:23896995 chr05:023896995 0 W/23896995-23896995 FN2412 SNP T -> G AC=1;AN=200;BQB=0.980877;DP=4226;DP4=1852,2133,7,6;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.297208;MQB=0.11261;MQSB=0;RPB=0.0274835;SGB=54.2646;VDB=0.0147393;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.5:23899630 chr05:023899630 0 W/23899630-23899630 FN-349 Single Base Substitution T-C UTR_3_PRIME HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-349.SNP.5:23899631 chr05:023899631 0 W/23899631-23899631 FN-349 Single Base Substitution G-A UTR_3_PRIME HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN848-S.SNP.5:23906657 chr05:023906657 0 W/23906657-23906657 FN848-S Single Base Substitution A-C INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN947-S.SNP.5:23913273 chr05:023913273 0 W/23913273-23913273 FN947-S Single Base Substitution G-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN947-S.SNP.5:23913274 chr05:023913274 0 W/23913274-23913274 FN947-S Single Base Substitution G-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN2499.SNP.5:23917418 chr05:023917418 0 W/23917418-23917418 FN2499 SNP C -> T AC=2;AN=200;BQB=0.0428352;DP=4533;DP4=2060,2162,8,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.73879e-12;MQSB=0.772474;RPB=0.997962;SGB=-5.84819;VDB=0.35199;EFF=INTRON(MODIFIER||||819|LOC_Os05g40790|protein_coding|CODING|LOC_Os05g40790.1|1|1),INTRON(MODIFIER||||808|LOC_Os05g40790|protein_coding|CODING|LOC_Os05g40790.2|1|1) FN-198.SNP.5:23934427 chr05:023934427 0 W/23934427-23934427 FN-198 Single Base Substitution C-A INTRON HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN1677-S.SNP.5:23935384 chr05:023935384 0 W/23935384-23935384 FN1677-S SNP T -> C AC=1;AN=188;BQB=0.0123725;DP=4032;DP4=2231,1768,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53237e-05;MQSB=0.996675;RPB=0.203423;SGB=-88.8972;VDB=0.0589829;EFF=INTRON(MODIFIER||||503|LOC_Os05g40810|protein_coding|CODING|LOC_Os05g40810.1|2|1) FN-181.SNP.5:23940920 chr05:023940920 0 W/23940920-23940920 FN-181 Single Base Substitution G-A INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN439-S.SNP.5:23941935 chr05:023941935 0 W/23941935-23941935 FN439-S Single Base Substitution C-T INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN922-S.SNP.5:23945120 chr05:023945120 0 W/23945120-23945120 FN922-S Single Base Substitution G-C INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3692-S.SNP.5:23948490 chr05:023948490 0 W/23948490-23948490 FN3692-S SNP G -> T AC=1;AN=190;BQB=0.344016;DP=2761;DP4=1284,1398,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00120577;MQSB=0.999368;RPB=0.594748;SGB=25.439;VDB=0.475845;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.5:23948714 chr05:023948714 0 W/23948714-23948714 FN3930-S SNP G -> A AC=1;AN=158;BQB=0.990598;DP=2332;DP4=995,1242,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.82711e-10;MQSB=0.995227;RPB=0.947663;SGB=60.1755;VDB=0.267301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.5:23949027 chr05:023949027 0 W/23949027-23949027 FN3504-S SNP G -> A AC=1;AN=188;BQB=0.913135;DP=2358;DP4=1196,1097,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45522e-05;MQSB=0.998213;RPB=0.961173;SGB=25.3545;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3330-S.SNP.5:23960285 chr05:023960285 0 W/23960285-23960285 FN3330-S SNP T -> C AC=1;AN=184;BQB=0.906947;DP=3251;DP4=1308,1835,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17536e-07;MQSB=0.250201;RPB=0.437359;SGB=15.7097;VDB=0.272591;EFF=INTERGENIC(MODIFIER||||||||||1) FN539-S.SNP.5:23962002 chr05:023962002 0 W/23962002-23962002 FN539-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN4177-S.SNP.5:23962750 chr05:023962750 0 W/23962750-23962750 FN4177-S SNP G -> T AC=1;AN=170;BQB=0.986308;DP=1814;DP4=847,897,6,15;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0793826;MQB=0.000189051;MQSB=0.00820997;RPB=0.0781511;SGB=62.4192;VDB=0.101881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G278W|950|LOC_Os05g40860|protein_coding|CODING|LOC_Os05g40860.1|1|1) FN747-S.SNP.5:23964837 chr05:023964837 0 W/23964837-23964837 FN747-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN4080-S.SNP.5:23965323 chr05:023965323 0 W/23965323-23965323 FN4080-S SNP C -> T AC=1;AN=182;BQB=0.614338;DP=3335;DP4=1259,1988,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.0668666;MQB=0.151108;MQSB=0.0358185;RPB=0.902182;SGB=57.644;VDB=0.700181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.5:23970692 chr05:023970692 0 W/23970692-23970692 FN1458-S Single Base Substitution C-T INTRON HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3358-S.SNP.5:23978381 chr05:023978381 0 W/23978381-23978381 FN3358-S SNP T -> A AC=1;AN=184;BQB=0.377617;DP=3332;DP4=1333,1700,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94973e-05;MQSB=0.987865;RPB=0.0894606;SGB=3.75875;VDB=0.0709305;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.5:23988208 chr05:023988208 0 W/23988208-23988208 FN544-S Single Base Substitution T-C INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN775-S.SNP.5:23995745 chr05:023995745 0 W/23995745-23995745 FN775-S Single Base Substitution T-C INTERGENIC HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN679-S.SNP.5:24005750 chr05:024005750 0 W/24005750-24005750 FN679-S Single Base Substitution G-A INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2265-S.SNP.5:24006492 chr05:024006492 0 W/24006492-24006492 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.941168;DP=4555;DP4=2105,2168,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00174e-11;MQSB=0.843003;RPB=0.316866;SGB=64.5316;VDB=0.601641;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.5:24010619 chr05:024010619 0 W/24010619-24010619 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.539206;DP=4161;DP4=2101,1878,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00432588;MQB=0.00133268;MQSB=0.408996;RPB=0.530435;SGB=67.9293;VDB=0.713614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.5:24010664 chr05:024010664 0 W/24010664-24010664 FN3535-S SNP C -> T AC=2;AN=188;BQB=0.116088;DP=2626;DP4=1280,1216,66,8;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00418888;MQB=1.14682e-41;MQSB=0.00797027;RPB=1.41878e-16;SGB=-741.738;VDB=4.34541e-09;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.5:24031616 chr05:024031616 0 W/24031616-24031616 FN1424-S Single Base Substitution G-A INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN2685-S.SNP.5:24038382 chr05:024038382 0 W/24038382-24038382 FN2685-S SNP C -> T AC=2;AN=200;BQB=0.415156;DP=4902;DP4=2269,2316,17,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.81437e-24;MQSB=0.999825;RPB=0.565419;SGB=148.425;VDB=0.873532;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R491C|552|LOC_Os05g41000|protein_coding|CODING|LOC_Os05g41000.1|11|1) FN3886-S.SNP.5:24041176 chr05:024041176 0 W/24041176-24041176 FN3886-S SNP A -> G AC=1;AN=158;BQB=0.856634;DP=2507;DP4=1216,1153,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.87578e-07;MQSB=0.967794;RPB=0.657192;SGB=42.6978;VDB=0.901433;EFF=UTR_5_PRIME(MODIFIER||26||319|LOC_Os05g41010|protein_coding|CODING|LOC_Os05g41010.1|1|1) FN3933-S.SNP.5:24041595 chr05:024041595 0 W/24041595-24041595 FN3933-S SNP A -> G AC=1;AN=158;BQB=0.716912;DP=2665;DP4=1222,1220,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.25592e-07;MQSB=0.525909;RPB=0.99128;SGB=23.8187;VDB=0.742898;EFF=INTRON(MODIFIER||||319|LOC_Os05g41010|protein_coding|CODING|LOC_Os05g41010.1|2|1) FN924-S.SNP.5:24057352 chr05:024057352 0 W/24057352-24057352 FN924-S Single Base Substitution A-C INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2361.SNP.5:24059907 chr05:024059907 0 W/24059907-24059907 FN2361 SNP G -> A AC=2;AN=192;BQB=0.964621;DP=4499;DP4=2108,1975,24,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.47869e-28;MQSB=0.945072;RPB=0.975024;SGB=164.532;VDB=0.439507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.5:24059908 chr05:024059908 0 W/24059908-24059908 FN2361 SNP T -> A AC=2;AN=192;BQB=0.757156;DP=4483;DP4=1980,1826,24,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.94576e-30;MQSB=0.997728;RPB=0.781531;SGB=-234.431;VDB=0.125209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.5:24059909 chr05:024059909 0 W/24059909-24059909 FN2361 SNP C -> A AC=2;AN=192;BQB=0.137523;DP=4507;DP4=2146,2065,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.14148e-29;MQSB=0.998359;RPB=0.963689;SGB=54.2852;VDB=0.142207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.5:24059929 chr05:024059929 0 W/24059929-24059929 FN1630-S Single Base Substitution C-T INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1630-S.SNP.5:24059933 chr05:024059933 0 W/24059933-24059933 FN1630-S Single Base Substitution A-T INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2106-S.SNP.5:24080921 chr05:024080921 0 W/24080921-24080921 FN2106-S SNP A -> T AC=1;AN=168;BQB=0.0246907;DP=2660;DP4=963,1627,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.66923e-09;MQSB=0.719229;RPB=0.0382142;SGB=-211.183;VDB=0.706608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.5:24081913 chr05:024081913 0 W/24081913-24081913 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.924982;DP=2736;DP4=1295,1321,13,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.41863e-12;MQSB=0.913163;RPB=0.87378;SGB=71.1374;VDB=0.0499157;EFF=UTR_5_PRIME(MODIFIER||667||261|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.2|1|1),INTRON(MODIFIER||||384|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.1|1|1) FN2547-S.SNP.5:24083787 chr05:024083787 0 W/24083787-24083787 FN2547-S SNP G -> T AC=1;AN=198;BQB=0.066962;DP=4110;DP4=1686,2209,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000323688;MQSB=0.927059;RPB=0.797434;SGB=-1.81641;VDB=0.946788;EFF=SPLICE_SITE_DONOR(HIGH||||384|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.1|6|1),SPLICE_SITE_DONOR(HIGH||||261|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.2|5|1),INTRON(MODIFIER||||384|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.1|6|1),INTRON(MODIFIER||||261|LOC_Os05g41120|protein_coding|CODING|LOC_Os05g41120.2|5|1);LOF=(LOC_Os05g41120|LOC_Os05g41120|2|1.00) FN-110.SNP.5:24103234 chr05:024103234 0 W/24103234-24103234 FN-110 Single Base Substitution T-C INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN569-S.SNP.5:24112958 chr05:024112958 0 W/24112958-24112958 FN569-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g41166 MYB family transcription factor, putative, expressed SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN-202.SNP.5:24118464 chr05:024118464 0 W/24118464-24118464 FN-202 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN697-S.SNP.5:24119241 chr05:024119241 0 W/24119241-24119241 FN697-S Single Base Substitution A-G INTRON HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN1028-S.SNP.5:24125187 chr05:024125187 0 W/24125187-24125187 FN1028-S Single Base Substitution C-T INTRON HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2547-S.SNP.5:24133504 chr05:024133504 0 W/24133504-24133504 FN2547-S SNP A -> C AC=1;AN=198;BQB=0.994842;DP=4252;DP4=2078,1988,2,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.5558e-05;MQSB=0.909336;RPB=0.769401;SGB=18.5788;VDB=0.351291;EFF=INTRON(MODIFIER||||149|LOC_Os05g41210|protein_coding|CODING|LOC_Os05g41210.1|1|1) FN3565-S.SNP.5:24136495 chr05:024136495 0 W/24136495-24136495 FN3565-S SNP C -> A AC=1;AN=188;BQB=0.983981;DP=2917;DP4=1379,1408,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.68494e-11;MQSB=0.999961;RPB=0.91505;SGB=80.782;VDB=0.288921;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.5:24137532 chr05:024137532 0 W/24137532-24137532 FN836-S Single Base Substitution T-C INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3825-S.SNP.5:24139605 chr05:024139605 0 W/24139605-24139605 FN3825-S SNP C -> G AC=1;AN=190;BQB=0.841472;DP=2488;DP4=1257,1138,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37605e-07;MQSB=0.997349;RPB=0.912386;SGB=43.2083;VDB=0.898074;EFF=INTRON(MODIFIER||||290|LOC_Os05g41220|protein_coding|CODING|LOC_Os05g41220.1|1|1),INTRON(MODIFIER||||141|LOC_Os05g41220|protein_coding|CODING|LOC_Os05g41220.2|1|1) FN687-S.SNP.5:24145988 chr05:024145988 0 W/24145988-24145988 FN687-S Single Base Substitution A-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2577-S.SNP.5:24155190 chr05:024155190 0 W/24155190-24155190 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.0471009;DP=3566;DP4=1779,1627,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.97866e-07;MQSB=0.301721;RPB=0.885266;SGB=-14.4309;VDB=0.260032;EFF=INTRON(MODIFIER||||257|LOC_Os05g41240|protein_coding|CODING|LOC_Os05g41240.1|6|1),INTRON(MODIFIER||||257|LOC_Os05g41240|protein_coding|CODING|LOC_Os05g41240.2|5|1),INTRON(MODIFIER||||257|LOC_Os05g41240|protein_coding|CODING|LOC_Os05g41240.3|6|1) FN-119.SNP.5:24157070 chr05:024157070 0 W/24157070-24157070 FN-119 Single Base Substitution A-T INTRON HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN282-S.SNP.5:24157547 chr05:024157547 0 W/24157547-24157547 FN282-S Single Base Substitution C-T INTRON HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3630-S.SNP.5:24170637 chr05:024170637 0 W/24170637-24170637 FN3630-S SNP G -> A AC=2;AN=190;BQB=0.869141;DP=2696;DP4=1312,1259,13,3;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.84201e-09;MQSB=0.99995;RPB=0.567087;SGB=67.3108;VDB=0.610589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.5:24174334 chr05:024174334 0 W/24174334-24174334 FN1221-S Single Base Substitution T-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN713-S.SNP.5:24180913 chr05:024180913 0 W/24180913-24180913 FN713-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN-295.SNP.5:24193916 chr05:024193916 0 W/24193916-24193916 FN-295 Single Base Substitution C-T INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2426.SNP.5:24197520 chr05:024197520 0 W/24197520-24197520 FN2426 SNP C -> G AC=1;AN=200;BQB=0.239989;DP=4844;DP4=1870,2729,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54977e-15;MQSB=0.912765;RPB=0.451715;SGB=83.5316;VDB=0.417511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L103V|1007|LOC_Os05g41310|protein_coding|CODING|LOC_Os05g41310.1|1|1) FN1236-S.SNP.5:24200394 chr05:024200394 0 W/24200394-24200394 FN1236-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os05g41310 disease resistance protein RGA2, putative, expressed SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN499-S.SNP.5:24201689 chr05:024201689 0 W/24201689-24201689 FN499-S Single Base Substitution A-G INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2197-S.SNP.5:24204859 chr05:024204859 0 W/24204859-24204859 FN2197-S SNP A -> G AC=2;AN=190;BQB=0.0815926;DP=5606;DP4=2660,2570,15,12;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.151267;MQB=0.725616;MQSB=0;RPB=0.828958;SGB=54.3062;VDB=0.874572;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.5:24222830 chr05:024222830 0 W/24222830-24222830 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.982093;DP=2585;DP4=1274,1198,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0812379;MQB=0.633127;MQSB=1.79125e-20;RPB=0.766648;SGB=52.3148;VDB=0.655596;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.5:24222831 chr05:024222831 0 W/24222831-24222831 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.796881;DP=2569;DP4=1276,1195,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0829116;MQB=0.786166;MQSB=7.81813e-21;RPB=0.825387;SGB=56.7575;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.5:24229829 chr05:024229829 0 W/24229829-24229829 FN1416-S Single Base Substitution A-C INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-15.SNP.5:24234609 chr05:024234609 0 W/24234609-24234609 FN-15 Single Base Substitution T-C UTR_3_PRIME Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN2588-S.SNP.5:24235160 chr05:024235160 0 W/24235160-24235160 FN2588-S SNP C -> T AC=2;AN=198;BQB=0.580872;DP=4346;DP4=2266,1815,23,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.25088e-25;MQSB=0.956331;RPB=0.548793;SGB=114.983;VDB=0.153807;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.5:24236838 chr05:024236838 0 W/24236838-24236838 FN872-S Single Base Substitution C-T INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2083-S.SNP.5:24237569 chr05:024237569 0 W/24237569-24237569 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.805205;DP=1751;DP4=1152,561,15,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.42151e-08;MQSB=0.763985;RPB=0.361019;SGB=4.1907;VDB=0.789972;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G127|177|LOC_Os05g41380|protein_coding|CODING|LOC_Os05g41380.1|1|1) FN-71.SNP.5:24239037 chr05:024239037 0 W/24239037-24239037 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-164.SNP.5:24242839 chr05:024242839 0 W/24242839-24242839 FN-164 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g41390 cyclin, putative, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2608-S.SNP.5:24256340 chr05:024256340 0 W/24256340-24256340 FN2608-S SNP G -> T AC=1;AN=198;BQB=0.873931;DP=3573;DP4=1621,1718,2,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.75905e-05;MQSB=0.993904;RPB=0.551863;SGB=26.5745;VDB=0.185086;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G316V|404|LOC_Os05g41420|protein_coding|CODING|LOC_Os05g41420.1|5|1) FN4114-S.SNP.5:24257827 chr05:024257827 0 W/24257827-24257827 FN4114-S SNP T -> C AC=1;AN=182;BQB=0.915325;DP=2898;DP4=1434,1398,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.07874e-07;MQSB=0.976012;RPB=0.991406;SGB=28.6061;VDB=0.999089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.5:24259200 chr05:024259200 0 W/24259200-24259200 FN2562-S SNP T -> G AC=1;AN=198;BQB=0.0921379;DP=4428;DP4=1984,2230,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.7695e-13;MQSB=0.387187;RPB=0.967072;SGB=17.325;VDB=0.227253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.5:24262698 chr05:024262698 0 W/24262698-24262698 FN1236-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN762-S.SNP.5:24264518 chr05:024264518 0 W/24264518-24264518 FN762-S Single Base Substitution A-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN4081-S.SNP.5:24266464 chr05:024266464 0 W/24266464-24266464 FN4081-S SNP A -> G AC=1;AN=182;BQB=0.916874;DP=2906;DP4=1496,1354,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=7.27321e-05;MQSB=0.129676;RPB=0.994248;SGB=25.0952;VDB=0.600763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.5:24268344 chr05:024268344 0 W/24268344-24268344 FN2155-S SNP A -> C AC=1;AN=168;BQB=0.0194726;DP=3579;DP4=1771,1778,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.43161e-08;MQSB=0.964379;RPB=0.999854;SGB=34.3388;VDB=0.766228;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.5:24270323 chr05:024270323 0 W/24270323-24270323 FN952-S Single Base Substitution C-A INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN4039-S.SNP.5:24282307 chr05:024282307 0 W/24282307-24282307 FN4039-S SNP A -> G AC=1;AN=168;BQB=0.993364;DP=2761;DP4=1201,1395,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.71412e-07;MQSB=0.99646;RPB=0.0104713;SGB=38.1788;VDB=0.00381901;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.5:24297705 chr05:024297705 0 W/24297705-24297705 FN910-S Single Base Substitution C-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN974-S.SNP.5:24299754 chr05:024299754 0 W/24299754-24299754 FN974-S Single Base Substitution A-C INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3627-S.SNP.5:24305684 chr05:024305684 0 W/24305684-24305684 FN3627-S SNP A -> G AC=1;AN=190;BQB=0.65524;DP=3032;DP4=1678,1271,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65683e-05;MQSB=0.83932;RPB=0.480805;SGB=39.9877;VDB=0.525878;EFF=INTRON(MODIFIER||||1637|LOC_Os05g41510|protein_coding|CODING|LOC_Os05g41510.1|12|1) FN1338-S.SNP.5:24306956 chr05:024306956 0 W/24306956-24306956 FN1338-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1475-S.SNP.5:24307624 chr05:024307624 0 W/24307624-24307624 FN1475-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g41510 SH2 motif, putative, expressed SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1154-S.SNP.5:24324693 chr05:024324693 0 W/24324693-24324693 FN1154-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN454-S.SNP.5:24324884 chr05:024324884 0 W/24324884-24324884 FN454-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN454-S.SNP.5:24324885 chr05:024324885 0 W/24324885-24324885 FN454-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN-109.SNP.5:24344810 chr05:024344810 0 W/24344810-24344810 FN-109 Single Base Substitution T-G INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN3443-S.SNP.5:24349752 chr05:024349752 0 W/24349752-24349752 FN3443-S SNP C -> G AC=1;AN=184;BQB=0.872675;DP=2499;DP4=1189,1258,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95679e-08;MQSB=0.759531;RPB=0.806032;SGB=23.2751;VDB=0.943079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P161R|1073|LOC_Os05g41580|protein_coding|CODING|LOC_Os05g41580.1|3|1) FN-66.SNP.5:24352187 chr05:024352187 0 W/24352187-24352187 FN-66 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2220-S.SNP.5:24356797 chr05:024356797 0 W/24356797-24356797 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.923214;DP=4394;DP4=1923,2232,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48461e-05;MQSB=0.834843;RPB=0.921073;SGB=15.9981;VDB=0.920145;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.5:24369063 chr05:024369063 0 W/24369063-24369063 FN1073-S Single Base Substitution A-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN1472-S.SNP.5:24372127 chr05:024372127 0 W/24372127-24372127 FN1472-S Single Base Substitution C-A INTRON HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2298.SNP.5:24372414 chr05:024372414 0 W/24372414-24372414 FN2298 SNP T -> C AC=2;AN=192;BQB=0.791753;DP=5513;DP4=2729,2512,25,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.25218e-28;MQSB=0.969704;RPB=0.923855;SGB=123.795;VDB=0.18123;EFF=INTRON(MODIFIER||||350|LOC_Os05g41610|protein_coding|CODING|LOC_Os05g41610.1|1|1) FN3370-S.SNP.5:24392610 chr05:024392610 0 W/24392610-24392610 FN3370-S SNP G -> A AC=2;AN=184;BQB=0.920068;DP=3135;DP4=1407,1571,21,14;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00414673;MQB=7.54047e-14;MQSB=0.721092;RPB=0.71403;SGB=152.744;VDB=0.0644754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A316T|908|LOC_Os05g41690|protein_coding|CODING|LOC_Os05g41690.1|1|1) FN438-S.SNP.5:24392801 chr05:024392801 0 W/24392801-24392801 FN438-S Single Base Substitution C-T INTRON HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN1656-S.SNP.5:24397905 chr05:024397905 0 W/24397905-24397905 FN1656-S Single Base Substitution G-A STOP_GAINED Homo LOC_Os05g41700 retrotransposon protein, putative, unclassified, expressed SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN552-S.SNP.5:24398049 chr05:024398049 0 W/24398049-24398049 FN552-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g41700 retrotransposon protein, putative, unclassified, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN552-S.SNP.5:24398050 chr05:024398050 0 W/24398050-24398050 FN552-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN695-S.SNP.5:24399807 chr05:024399807 0 W/24399807-24399807 FN695-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3853-S.SNP.5:24400404 chr05:024400404 0 W/24400404-24400404 FN3853-S SNP G -> A AC=1;AN=158;BQB=0.999774;DP=2341;DP4=1027,1247,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00683469;MQB=0.110756;MQSB=0.465836;RPB=0.764707;SGB=51.4366;VDB=0.851622;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H205|1734|LOC_Os05g41700|protein_coding|CODING|LOC_Os05g41700.1|2|1) FN2597-S.SNP.5:24403020 chr05:024403020 0 W/24403020-24403020 FN2597-S SNP A -> G AC=1;AN=198;BQB=0.810918;DP=3881;DP4=1725,1914,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.41995e-05;MQSB=0.981547;RPB=0.446394;SGB=25.7687;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.5:24406147 chr05:024406147 0 W/24406147-24406147 FN3377-S SNP G -> A AC=1;AN=184;BQB=0.997292;DP=3451;DP4=1638,1681,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52939e-05;MQSB=0.525728;RPB=0.197395;SGB=-3.85014;VDB=0.315489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1343V|1756|LOC_Os05g41720|protein_coding|CODING|LOC_Os05g41720.1|11|1) FN1265-S.SNP.5:24407220 chr05:024407220 0 W/24407220-24407220 FN1265-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2723-S.SNP.5:24410027 chr05:024410027 0 W/24410027-24410027 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.310843;DP=4775;DP4=2223,2302,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.29255e-08;MQSB=0.942857;RPB=0.979689;SGB=47.4799;VDB=0.660741;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A464V|1756|LOC_Os05g41720|protein_coding|CODING|LOC_Os05g41720.1|4|1) FN2436.SNP.5:24415548 chr05:024415548 0 W/24415548-24415548 FN2436 SNP C -> T AC=1;AN=200;BQB=0.0890102;DP=4501;DP4=2273,1972,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.6343e-08;MQSB=0.876331;RPB=0.312934;SGB=3.06925;VDB=0.855875;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.5:24415888 chr05:024415888 0 W/24415888-24415888 FN430-S Single Base Substitution G-A INTRON HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3851-S.SNP.5:24432818 chr05:024432818 0 W/24432818-24432818 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.99486;DP=3067;DP4=1478,1440,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.69307e-10;MQSB=0.994899;RPB=0.992884;SGB=73.2838;VDB=0.735046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.5:24434858 chr05:024434858 0 W/24434858-24434858 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.88875;DP=4951;DP4=2408,2248,6,19;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0369622;MQB=1.37172e-07;MQSB=5.24767e-08;RPB=0.600419;SGB=50.3263;VDB=0.100897;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.5:24434859 chr05:024434859 0 W/24434859-24434859 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.99995;DP=4964;DP4=2420,2234,9,18;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0378727;MQB=1.44853e-05;MQSB=1.45423e-07;RPB=0.302255;SGB=87.1368;VDB=0.155537;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.5:24444068 chr05:024444068 0 W/24444068-24444068 FN852-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN1732-S.SNP.5:24448261 chr05:024448261 0 W/24448261-24448261 FN1732-S SNP G -> T AC=1;AN=188;BQB=0.349525;DP=3420;DP4=2359,1026,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67147e-07;MQSB=0.999991;RPB=0.990694;SGB=-13.9132;VDB=0.779209;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.5:24448648 chr05:024448648 0 W/24448648-24448648 FN791-S Single Base Substitution A-T INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN-113.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN-113 Single Base Substitution C-A INTERGENIC HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-362.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN-362 Single Base Substitution C-A INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1140-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN1140-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1373-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN1373-S Single Base Substitution C-A INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1396-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN1396-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1459-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN1459-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2103-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN2103-S SNP C -> A AC=1;AN=168;BQB=0.828498;DP=4269;DP4=2203,1954,20,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.16675e-17;MQSB=0.97078;RPB=0.959956;SGB=-139.169;VDB=0.102987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2253-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN2253-S SNP C -> A AC=2;AN=190;BQB=0.997066;DP=4986;DP4=2220,2246,6,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.49658e-10;MQSB=0.532714;RPB=0.994643;SGB=-12.6681;VDB=0.00527193;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN2751-S SNP C -> A AC=2;AN=200;BQB=0.909488;DP=5229;DP4=2533,2333,16,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.47724e-23;MQSB=0.949978;RPB=0.96063;SGB=49.6192;VDB=0.638466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN3852-S SNP C -> A AC=2;AN=158;BQB=0.985543;DP=2579;DP4=1302,1158,13,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.98106e-19;MQSB=0.944944;RPB=0.89198;SGB=101.462;VDB=0.437422;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN391-S Single Base Substitution C-A INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4032-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN4032-S SNP C -> A AC=2;AN=168;BQB=0.91346;DP=2784;DP4=1350,1298,25,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.03713e-22;MQSB=0.990918;RPB=0.949014;SGB=85.386;VDB=0.580471;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.5:24448941 chr05:024448941 0 W/24448941-24448941 FN4271-S SNP C -> A AC=1;AN=170;BQB=0.848393;DP=2424;DP4=1205,1132,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.19416e-07;MQSB=0.99975;RPB=0.864892;SGB=17.4413;VDB=0.0746176;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.5:24449666 chr05:024449666 0 W/24449666-24449666 FN4161-S SNP A -> G AC=1;AN=170;BQB=0.973965;DP=2548;DP4=1278,1138,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.41747e-08;MQSB=0.986314;RPB=0.772339;SGB=41.7633;VDB=0.268087;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.5:24451751 chr05:024451751 0 W/24451751-24451751 FN503-S Single Base Substitution G-C INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN4247-S.SNP.5:24455362 chr05:024455362 0 W/24455362-24455362 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.979006;DP=2150;DP4=1050,1045,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.267e-07;MQSB=0.987001;RPB=0.753542;SGB=24.5502;VDB=0.279539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.5:24458249 chr05:024458249 0 W/24458249-24458249 FN1220-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-201.SNP.5:24459171 chr05:024459171 0 W/24459171-24459171 FN-201 Single Base Substitution G-T INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN889-S.SNP.5:24466092 chr05:024466092 0 W/24466092-24466092 FN889-S Single Base Substitution C-G INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN-145.SNP.5:24468647 chr05:024468647 0 W/24468647-24468647 FN-145 Single Base Substitution T-C INTRON HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3280-S.SNP.5:24473789 chr05:024473789 0 W/24473789-24473789 FN3280-S SNP C -> A AC=1;AN=184;BQB=0.932513;DP=3144;DP4=1693,1358,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08905e-06;MQSB=0.676328;RPB=0.992612;SGB=62.3078;VDB=0.858768;EFF=INTRON(MODIFIER||||488|LOC_Os05g41795|protein_coding|CODING|LOC_Os05g41795.1|2|1) FN-135.SNP.5:24481900 chr05:024481900 0 W/24481900-24481900 FN-135 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g41800 ribosomal protein L11 methyltransferase-related, putative, expressed SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN_829-2-5.SNP.5:24491243 chr05:024491243 0 W/24491243-24491243 FN_829-2-5 Single Base Substitution C-T Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN1610-S.SNP.5:24494094 chr05:024494094 0 W/24494094-24494094 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3887-S.SNP.5:24496144 chr05:024496144 0 W/24496144-24496144 FN3887-S SNP T -> A AC=1;AN=158;BQB=0.906529;DP=2580;DP4=1199,1275,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.66847e-08;MQSB=0.495456;RPB=0.752913;SGB=34.0735;VDB=0.980953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.5:24496145 chr05:024496145 0 W/24496145-24496145 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.952455;DP=2578;DP4=1182,1315,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.80913e-07;MQSB=0.522232;RPB=0.986542;SGB=42.6978;VDB=0.965539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.5:24497508 chr05:024497508 0 W/24497508-24497508 FN1438-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3820-S.SNP.5:24498536 chr05:024498536 0 W/24498536-24498536 FN3820-S SNP T -> C AC=2;AN=190;BQB=0.653824;DP=2624;DP4=1341,1197,13,7;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.16725e-11;MQSB=0.260274;RPB=0.997036;SGB=60.9777;VDB=0.615033;EFF=INTRON(MODIFIER||||1301|LOC_Os05g41830|protein_coding|CODING|LOC_Os05g41830.1|4|1) FN3820-S.SNP.5:24499348 chr05:024499348 0 W/24499348-24499348 FN3820-S SNP G -> T AC=2;AN=190;BQB=0.855671;DP=2536;DP4=1296,1143,5,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000394322;MQB=2.56475e-08;MQSB=0.579565;RPB=0.548687;SGB=62.7569;VDB=0.990189;EFF=INTRON(MODIFIER||||1301|LOC_Os05g41830|protein_coding|CODING|LOC_Os05g41830.1|3|1) FN3820-S.SNP.5:24499349 chr05:024499349 0 W/24499349-24499349 FN3820-S SNP A -> T AC=2;AN=190;BQB=0.791674;DP=2525;DP4=1313,1143,5,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00039604;MQB=1.24693e-08;MQSB=0.747175;RPB=0.46921;SGB=43.2083;VDB=0.922707;EFF=INTRON(MODIFIER||||1301|LOC_Os05g41830|protein_coding|CODING|LOC_Os05g41830.1|3|1) FN4093-S.SNP.5:24502908 chr05:024502908 0 W/24502908-24502908 FN4093-S SNP G -> A AC=2;AN=182;BQB=0.983495;DP=2619;DP4=1322,1215,10,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.12464e-10;MQSB=0.995768;RPB=0.973487;SGB=75.6874;VDB=0.205194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.5:24504565 chr05:024504565 0 W/24504565-24504565 FN2433 SNP C -> A AC=1;AN=200;BQB=0.975576;DP=3591;DP4=1443,1915,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26681e-12;MQSB=0.904467;RPB=0.923552;SGB=47.7211;VDB=0.734506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L171F|207|LOC_Os05g41840|protein_coding|CODING|LOC_Os05g41840.1|1|1) FN2264-S.SNP.5:24525602 chr05:024525602 0 W/24525602-24525602 FN2264-S SNP C -> T AC=1;AN=190;BQB=0.895119;DP=5037;DP4=2230,2440,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.10714e-12;MQSB=0.287056;RPB=0.738275;SGB=38.983;VDB=0.665281;EFF=INTRON(MODIFIER||||529|LOC_Os05g41880|protein_coding|CODING|LOC_Os05g41880.1|6|1) FN3639-S.SNP.5:24534950 chr05:024534950 0 W/24534950-24534950 FN3639-S SNP G -> C AC=1;AN=190;BQB=0.897113;DP=2508;DP4=1242,1129,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0015949;MQB=3.68724e-05;MQSB=0.138922;RPB=0.766053;SGB=13.4442;VDB=0.997547;EFF=INTRON(MODIFIER||||228|LOC_Os05g41890|protein_coding|CODING|LOC_Os05g41890.1|1|1) FN1256-S.SNP.5:24541421 chr05:024541421 0 W/24541421-24541421 FN1256-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g41910 expressed protein SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1256-S.SNP.5:24541424 chr05:024541424 0 W/24541424-24541424 FN1256-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g41910 expressed protein SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2626-S.SNP.5:24571382 chr05:024571382 0 W/24571382-24571382 FN2626-S SNP C -> A AC=1;AN=200;BQB=0.273643;DP=4989;DP4=2463,2236,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200441;MQB=1.08368e-05;MQSB=0.485078;RPB=0.798066;SGB=33.0593;VDB=0.66732;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W97C|484|LOC_Os05g41950|protein_coding|CODING|LOC_Os05g41950.1|1|1) FN3856-S.SNP.5:24580767 chr05:024580767 0 W/24580767-24580767 FN3856-S SNP C -> T AC=2;AN=158;BQB=0.943028;DP=2576;DP4=1208,1237,10,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.31035e-17;MQSB=0.863943;RPB=0.443413;SGB=125.717;VDB=0.524433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.5:24583216 chr05:024583216 0 W/24583216-24583216 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.703275;DP=3195;DP4=1779,1296,17,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.44656e-13;MQSB=0.683947;RPB=0.343446;SGB=95.6183;VDB=0.0687073;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.5:24586870 chr05:024586870 0 W/24586870-24586870 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN421-S.SNP.5:24587411 chr05:024587411 0 W/24587411-24587411 FN421-S Single Base Substitution C-T START_GAINED HET LOC_Os05g42000 peroxidase precursor, putative, expressed SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN589-S.SNP.5:24587828 chr05:024587828 0 W/24587828-24587828 FN589-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3393-S.SNP.5:24593701 chr05:024593701 0 W/24593701-24593701 FN3393-S SNP A -> C AC=1;AN=184;BQB=0.801188;DP=2855;DP4=1416,1329,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.14072e-08;MQSB=0.766159;RPB=0.256473;SGB=71.3514;VDB=0.672348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.5:24593748 chr05:024593748 0 W/24593748-24593748 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.876774;DP=4978;DP4=2405,2152,15,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.02503e-18;MQSB=0.987664;RPB=0.726788;SGB=-4.35995;VDB=0.734336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.5:24599069 chr05:024599069 0 W/24599069-24599069 FN2125-S SNP A -> G AC=1;AN=168;BQB=0.495106;DP=1959;DP4=913,1014,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46119e-07;MQSB=0.908644;RPB=0.760855;SGB=8.48315;VDB=0.525933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.5:24610320 chr05:024610320 0 W/24610320-24610320 FN2451 SNP A -> G AC=1;AN=200;BQB=0.917447;DP=4741;DP4=2151,2332,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210926;MQB=2.09601e-13;MQSB=0.926545;RPB=0.56911;SGB=83.5316;VDB=0.773287;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.5:24617669 chr05:024617669 0 W/24617669-24617669 FN935-S Single Base Substitution A-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2795-S.SNP.5:24618049 chr05:024618049 0 W/24618049-24618049 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.16706;DP=4447;DP4=1849,2166,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00584664;MQB=8.88125e-09;MQSB=0.159369;RPB=0.209364;SGB=-66.8501;VDB=0.346755;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.5:24618489 chr05:024618489 0 W/24618489-24618489 FN1540-S Single Base Substitution G-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1033-S.SNP.5:24618642 chr05:024618642 0 W/24618642-24618642 FN1033-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g42080 expressed protein SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2110-S.SNP.5:24619745 chr05:024619745 0 W/24619745-24619745 FN2110-S SNP T -> A AC=1;AN=168;BQB=0.00345894;DP=4171;DP4=2128,1857,13,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87901e-07;MQSB=0.997307;RPB=0.282031;SGB=-570.848;VDB=0.130857;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.5:24619746 chr05:024619746 0 W/24619746-24619746 FN1123-S Single Base Substitution A-T INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2791-S.SNP.5:24619746 chr05:024619746 0 W/24619746-24619746 FN2791-S SNP A -> T AC=1;AN=198;BQB=0.693618;DP=4177;DP4=1975,1927,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239406;MQB=2.42869e-09;MQSB=0.677234;RPB=0.289503;SGB=37.1297;VDB=0.155226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.5:24622953 chr05:024622953 0 W/24622953-24622953 FN3925-S SNP C -> A AC=1;AN=158;BQB=0.0288406;DP=2066;DP4=412,1456,10,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.64862e-10;MQSB=0.0703617;RPB=0.357105;SGB=-67.417;VDB=0.893876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:24626346 chr05:024626346 0 W/24626346-24626346 FN2572-S SNP T -> A AC=1;AN=198;BQB=0.924357;DP=4099;DP4=1715,2073,12,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.01678e-16;MQSB=0.338169;RPB=0.921637;SGB=-41.0942;VDB=0.705709;EFF=UTR_3_PRIME(MODIFIER||157||99|LOC_Os05g42110|protein_coding|CODING|LOC_Os05g42110.1|1|1) FN2572-S.SNP.5:24626346 chr05:024626346 0 W/24626346-24626346 FN2572-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1220-S.SNP.5:24632436 chr05:024632436 0 W/24632436-24632436 FN1220-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN434-S.SNP.5:24645513 chr05:024645513 0 W/24645513-24645513 FN434-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN434-S.SNP.5:24645514 chr05:024645514 0 W/24645514-24645514 FN434-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g42150 OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN462-S.SNP.5:24646633 chr05:024646633 0 W/24646633-24646633 FN462-S Single Base Substitution T-C INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3595-S.SNP.5:24651448 chr05:024651448 0 W/24651448-24651448 FN3595-S SNP A -> G AC=1;AN=190;BQB=0.990357;DP=2753;DP4=1281,1255,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2735e-10;MQSB=0.928161;RPB=0.728672;SGB=31.3213;VDB=0.977483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.5:24655954 chr05:024655954 0 W/24655954-24655954 FN2192-S SNP G -> T AC=1;AN=190;BQB=0.492535;DP=5167;DP4=2359,2482,16,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193536;MQB=1.01672e-12;MQSB=0.950504;RPB=0.95256;SGB=85.8548;VDB=0.264871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.5:24663409 chr05:024663409 0 W/24663409-24663409 FN2664-S SNP C -> A AC=2;AN=200;BQB=0.395188;DP=5103;DP4=2484,2331,34,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.18348e-40;MQSB=0.973496;RPB=0.0904002;SGB=242.159;VDB=0.0117488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.5:24667331 chr05:024667331 0 W/24667331-24667331 FN3486-S SNP A -> T AC=1;AN=184;BQB=0.945673;DP=3024;DP4=1673,1281,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67394e-05;MQSB=0.999604;RPB=0.564756;SGB=25.1826;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.5:24671935 chr05:024671935 0 W/24671935-24671935 FN2220-S SNP T -> A AC=1;AN=190;BQB=0.697537;DP=5122;DP4=2387,2272,24,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.9724e-27;MQSB=0.61364;RPB=0.970919;SGB=3.39433;VDB=0.87559;EFF=INTRON(MODIFIER||||205|LOC_Os05g42190|protein_coding|CODING|LOC_Os05g42190.1|1|1) FN-207.SNP.5:24678401 chr05:024678401 0 W/24678401-24678401 FN-207 Single Base Substitution G-A INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1751-S.SNP.5:24682822 chr05:024682822 0 W/24682822-24682822 FN1751-S SNP C -> G AC=2;AN=188;BQB=0.986841;DP=1377;DP4=679,648,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05809e-05;MQSB=0.972463;RPB=0.0584419;SGB=46.6141;VDB=0.0665921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.5:24686172 chr05:024686172 0 W/24686172-24686172 FN2752-S SNP T -> A AC=1;AN=200;BQB=0.901394;DP=5025;DP4=2429,2415,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93393e-11;MQSB=0.836005;RPB=0.999084;SGB=65.5058;VDB=0.983766;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.5:24689804 chr05:024689804 0 W/24689804-24689804 FN-384 Single Base Substitution G-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1662-S.SNP.5:24693868 chr05:024693868 0 W/24693868-24693868 FN1662-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2340.SNP.5:24693868 chr05:024693868 0 W/24693868-24693868 FN2340 SNP G -> A AC=1;AN=192;BQB=0.886777;DP=5122;DP4=2516,2320,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64923e-09;MQSB=0.968159;RPB=0.678198;SGB=7.3548;VDB=0.391324;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L419|706|LOC_Os05g42220|protein_coding|CODING|LOC_Os05g42220.1|3|1) FN2563-S.SNP.5:24693868 chr05:024693868 0 W/24693868-24693868 FN2563-S SNP G -> A AC=2;AN=198;BQB=0.998782;DP=4085;DP4=2016,1879,14,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.76802e-12;MQSB=0.977016;RPB=0.258341;SGB=79.6954;VDB=0.468295;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L419|706|LOC_Os05g42220|protein_coding|CODING|LOC_Os05g42220.1|3|1) FN3444-S.SNP.5:24693868 chr05:024693868 0 W/24693868-24693868 FN3444-S SNP G -> A AC=2;AN=184;BQB=0.72959;DP=2593;DP4=1282,1219,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.06451e-14;MQSB=0.998366;RPB=0.287313;SGB=81.5311;VDB=0.368134;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L419|706|LOC_Os05g42220|protein_coding|CODING|LOC_Os05g42220.1|3|1) FN3419-S.SNP.5:24700223 chr05:024700223 0 W/24700223-24700223 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.987914;DP=2563;DP4=1284,1161,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.8079e-07;MQSB=0.324457;RPB=0.267593;SGB=18.2315;VDB=0.615726;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.5:24704796 chr05:024704796 0 W/24704796-24704796 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-128.SNP.5:24713344 chr05:024713344 0 W/24713344-24713344 FN-128 Single Base Substitution A-T INTRON HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN915-S.SNP.5:24721102 chr05:024721102 0 W/24721102-24721102 FN915-S Single Base Substitution C-A INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN915-S.SNP.5:24721105 chr05:024721105 0 W/24721105-24721105 FN915-S Single Base Substitution A-C INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN768-S.SNP.5:24722286 chr05:024722286 0 W/24722286-24722286 FN768-S Single Base Substitution G-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN-175.SNP.5:24722730 chr05:024722730 0 W/24722730-24722730 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-81.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN-81 Single Base Substitution G-C INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1336-S.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN1336-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1358-S.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN1358-S Single Base Substitution G-C INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1579-S.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN1579-S Single Base Substitution G-C INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2374.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN2374 SNP G -> C AC=2;AN=192;BQB=0.18316;DP=5034;DP4=2396,2322,13,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.25176e-17;MQSB=0.97498;RPB=0.91552;SGB=111.067;VDB=0.636761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN2451 SNP G -> C AC=2;AN=200;BQB=0.393903;DP=5014;DP4=2203,2506,26,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.32573e-30;MQSB=0.755298;RPB=0.214585;SGB=138.902;VDB=0.674209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN3713-S SNP G -> C AC=2;AN=190;BQB=0.677678;DP=2957;DP4=1005,1741,8,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.02811e-12;MQSB=0.0661531;RPB=0.285691;SGB=100.07;VDB=0.0960307;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.5:24724013 chr05:024724013 0 W/24724013-24724013 FN914-S Single Base Substitution G-C INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3385-S.SNP.5:24727971 chr05:024727971 0 W/24727971-24727971 FN3385-S SNP A -> T AC=2;AN=184;BQB=0.819398;DP=2497;DP4=1188,1206,5,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.6107e-09;MQSB=0.995148;RPB=0.999759;SGB=62.3078;VDB=0.685263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.5:24730672 chr05:024730672 0 W/24730672-24730672 FN1282-S Single Base Substitution T-G INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1332-S.SNP.5:24742638 chr05:024742638 0 W/24742638-24742638 FN1332-S Single Base Substitution A-G INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2412.SNP.5:24752691 chr05:024752691 0 W/24752691-24752691 FN2412 SNP G -> A AC=1;AN=200;BQB=0.576959;DP=4656;DP4=2052,2284,9,16;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0672251;MQB=0.627993;MQSB=1.08097e-12;RPB=0.686362;SGB=-68.0744;VDB=0.339407;EFF=INTRON(MODIFIER||||1923|LOC_Os05g42320|protein_coding|CODING|LOC_Os05g42320.1|1|1) FN2557-S.SNP.5:24762811 chr05:024762811 0 W/24762811-24762811 FN2557-S SNP T -> C AC=2;AN=198;BQB=0.95261;DP=4407;DP4=2079,2105,18,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.11371e-19;MQSB=0.997708;RPB=0.987435;SGB=65.676;VDB=0.268239;EFF=INTRON(MODIFIER||||282|LOC_Os05g42330|protein_coding|CODING|LOC_Os05g42330.1|11|1) FN_831-4-1.SNP.5:24771836 chr05:024771836 0 W/24771836-24771836 FN_831-4-1 Single Base Substitution G-T HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2462.SNP.5:24773516 chr05:024773516 0 W/24773516-24773516 FN2462 SNP C -> G AC=1;AN=200;BQB=0.654521;DP=4248;DP4=2198,1860,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.59208e-06;MQSB=0.995742;RPB=0.699579;SGB=19.0642;VDB=0.187969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.5:24775027 chr05:024775027 0 W/24775027-24775027 FN3694-S SNP T -> A AC=1;AN=190;BQB=0.792211;DP=1964;DP4=562,1249,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93278e-05;MQSB=0.992196;RPB=0.993379;SGB=-0.550503;VDB=0.977733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V104D|304|LOC_Os05g42340|protein_coding|CODING|LOC_Os05g42340.1|1|1) FN1458-S.SNP.5:24778346 chr05:024778346 0 W/24778346-24778346 FN1458-S Single Base Substitution T-A INTRON HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3637-S.SNP.5:24780234 chr05:024780234 0 W/24780234-24780234 FN3637-S SNP C -> T AC=2;AN=190;BQB=0.516342;DP=2828;DP4=1428,1257,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.61784e-10;MQSB=0.842455;RPB=0.969716;SGB=57.4238;VDB=0.832201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A353T|641|LOC_Os05g42350|protein_coding|CODING|LOC_Os05g42350.1|3|1) FN-227.SNP.5:24787293 chr05:024787293 0 W/24787293-24787293 FN-227 Single Base Substitution G-A INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2574-S.SNP.5:24794995 chr05:024794995 0 W/24794995-24794995 FN2574-S SNP T -> C AC=1;AN=198;BQB=0.998488;DP=4125;DP4=2005,1957,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.65554e-06;MQSB=0.99971;RPB=0.809432;SGB=22.1736;VDB=0.626335;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F1025|1380|LOC_Os05g42370|protein_coding|CODING|LOC_Os05g42370.1|8|1) FN2662-S.SNP.5:24796036 chr05:024796036 0 W/24796036-24796036 FN2662-S SNP G -> A AC=2;AN=200;BQB=0.207785;DP=4869;DP4=2289,2293,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.47951e-28;MQSB=0.983656;RPB=0.972894;SGB=159.24;VDB=0.724249;EFF=INTRON(MODIFIER||||1380|LOC_Os05g42370|protein_coding|CODING|LOC_Os05g42370.1|8|1) FN2340.SNP.5:24798612 chr05:024798612 0 W/24798612-24798612 FN2340 SNP C -> A AC=1;AN=192;BQB=0.318083;DP=5142;DP4=2720,2094,27,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.82456e-22;MQSB=0.742248;RPB=0.947835;SGB=82.7652;VDB=0.818263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.5:24800513 chr05:024800513 0 W/24800513-24800513 FN2461 SNP G -> A AC=1;AN=200;BQB=0.343941;DP=5076;DP4=2525,2216,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25063e-08;MQSB=0.959553;RPB=0.956898;SGB=3.06925;VDB=0.960152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.5:24802014 chr05:024802014 0 W/24802014-24802014 FN-119 Single Base Substitution G-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-336.SNP.5:24802173 chr05:024802173 0 W/24802173-24802173 FN-336 Single Base Substitution T-C INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2261-S.SNP.5:24802386 chr05:024802386 0 W/24802386-24802386 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.230527;DP=4869;DP4=2114,2322,18,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.93623e-17;MQSB=0.993884;RPB=0.997957;SGB=74.7373;VDB=0.288137;EFF=INTERGENIC(MODIFIER||||||||||1) FN1515-S.SNP.5:24806405 chr05:024806405 0 W/24806405-24806405 FN1515-S Single Base Substitution C-A INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1015-S.SNP.5:24811987 chr05:024811987 0 W/24811987-24811987 FN1015-S Single Base Substitution G-A INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN2455.SNP.5:24811987 chr05:024811987 0 W/24811987-24811987 FN2455 SNP G -> A AC=1;AN=200;BQB=0.573732;DP=4262;DP4=1960,2017,17,10;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0574847;MQB=0.96611;MQSB=0.905993;RPB=0.856226;SGB=55.5366;VDB=0.293978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.5:24811987 chr05:024811987 0 W/24811987-24811987 FN3551-S SNP G -> A AC=1;AN=188;BQB=0.963672;DP=3293;DP4=1613,1623,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.10659;MQB=0.529875;MQSB=0.331253;RPB=0.600498;SGB=39.8925;VDB=0.2913;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.5:24819295 chr05:024819295 0 W/24819295-24819295 FN-226 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g42380 expressed protein SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1392-S.SNP.5:24823824 chr05:024823824 0 W/24823824-24823824 FN1392-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1624-S.SNP.5:24824624 chr05:024824624 0 W/24824624-24824624 FN1624-S Single Base Substitution T-G INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2239-S.SNP.5:24826273 chr05:024826273 0 W/24826273-24826273 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.773363;DP=1735;DP4=995,526,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0541787;MQB=0.467726;MQSB=0.994091;RPB=0.781116;SGB=30.8803;VDB=0.970307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.5:24826360 chr05:024826360 0 W/24826360-24826360 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.788848;DP=1917;DP4=1182,633,13,5;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0453834;MQB=0.291719;MQSB=2.84905e-36;RPB=0.501698;SGB=50.9207;VDB=0.576628;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.5:24826947 chr05:024826947 0 W/24826947-24826947 FN4064-S SNP C -> G AC=1;AN=168;BQB=0.916777;DP=2192;DP4=1037,1077,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00182482;MQB=0.00778061;MQSB=0.431851;RPB=0.750767;SGB=21.0249;VDB=0.401367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:24827694 chr05:024827694 0 W/24827694-24827694 FN2572-S Single Base Substitution C-A INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN4180-S.SNP.5:24827877 chr05:024827877 0 W/24827877-24827877 FN4180-S SNP C -> T AC=1;AN=170;BQB=0.850204;DP=2416;DP4=1366,898,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0256623;MQB=0.345431;MQSB=1.4094e-09;RPB=0.202386;SGB=14.9986;VDB=0.176605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.5:24829169 chr05:024829169 0 W/24829169-24829169 FN3598-S SNP G -> A AC=1;AN=188;BQB=0.825934;DP=3077;DP4=1074,1842,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0103997;MQB=0.00349185;MQSB=9.48961e-07;RPB=0.997433;SGB=33.7061;VDB=0.112784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.5:24830000 chr05:024830000 0 W/24830000-24830000 FN2407 SNP T -> C AC=1;AN=200;BQB=0.0640661;DP=4829;DP4=2636,1920,14,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00476289;MQB=0.0102472;MQSB=0.579804;RPB=0.870481;SGB=50.3263;VDB=0.54486;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.5:24833382 chr05:024833382 0 W/24833382-24833382 FN737-S Single Base Substitution A-T INTRON HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN627-S.SNP.5:24838899 chr05:024838899 0 W/24838899-24838899 FN627-S Single Base Substitution A-G INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2659-S.SNP.5:24853505 chr05:024853505 0 W/24853505-24853505 FN2659-S SNP T -> G AC=1;AN=200;BQB=0.992722;DP=4712;DP4=2300,2181,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12007e-14;MQSB=0.992752;RPB=0.801382;SGB=50.3263;VDB=0.522412;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.5:24854815 chr05:024854815 0 W/24854815-24854815 FN347-S Single Base Substitution A-C INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1528-S.SNP.5:24858333 chr05:024858333 0 W/24858333-24858333 FN1528-S Single Base Substitution T-C INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3810-S.SNP.5:24858416 chr05:024858416 0 W/24858416-24858416 FN3810-S SNP T -> C AC=2;AN=190;BQB=0.890127;DP=2242;DP4=1071,993,7,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00044603;MQB=8.70373e-07;MQSB=7.05036e-06;RPB=0.798016;SGB=53.6492;VDB=0.263425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.5:24858727 chr05:024858727 0 W/24858727-24858727 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.852667;DP=4904;DP4=2408,2240,20,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.67619e-13;MQSB=0.744882;RPB=0.578883;SGB=52.9314;VDB=0.875213;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.5:24867098 chr05:024867098 0 W/24867098-24867098 FN1396-S Single Base Substitution A-G INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN-161.SNP.5:24869730 chr05:024869730 0 W/24869730-24869730 FN-161 Single Base Substitution G-A INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3838-S.SNP.5:24869796 chr05:024869796 0 W/24869796-24869796 FN3838-S SNP T -> G AC=1;AN=190;BQB=0.647647;DP=3307;DP4=1181,1876,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.02737e-10;MQSB=0.986481;RPB=0.539482;SGB=-12.1142;VDB=0.685762;EFF=INTERGENIC(MODIFIER||||||||||1) FN-135.SNP.5:24874612 chr05:024874612 0 W/24874612-24874612 FN-135 Single Base Substitution C-T INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN2752-S.SNP.5:24878722 chr05:024878722 0 W/24878722-24878722 FN2752-S SNP C -> A AC=1;AN=200;BQB=0.958117;DP=4781;DP4=2013,2489,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19227e-08;MQSB=0.996015;RPB=0.234354;SGB=63.4749;VDB=0.440196;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.5:24882613 chr05:024882613 0 W/24882613-24882613 FN1221-S Single Base Substitution A-T INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN465-S.SNP.5:24886442 chr05:024886442 0 W/24886442-24886442 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1018-S.SNP.5:24886528 chr05:024886528 0 W/24886528-24886528 FN1018-S Single Base Substitution G-A INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1476-S.SNP.5:24887075 chr05:024887075 0 W/24887075-24887075 FN1476-S Single Base Substitution T-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN840-S.SNP.5:24889549 chr05:024889549 0 W/24889549-24889549 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3368-S.SNP.5:24890646 chr05:024890646 0 W/24890646-24890646 FN3368-S SNP T -> C AC=2;AN=184;BQB=0.996191;DP=3185;DP4=1463,1537,19,32;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.03068e-28;MQSB=0.628507;RPB=0.716187;SGB=219.588;VDB=0.923807;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.5:24895248 chr05:024895248 0 W/24895248-24895248 FN872-S Single Base Substitution T-C INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2183-S.SNP.5:24896281 chr05:024896281 0 W/24896281-24896281 FN2183-S SNP C -> A AC=1;AN=190;BQB=0.573116;DP=4852;DP4=2400,2083,22,26;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.40427e-26;MQSB=0.328001;RPB=0.201888;SGB=2.84045;VDB=0.251321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.5:24896861 chr05:024896861 0 W/24896861-24896861 FN1610-S Single Base Substitution A-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3790-S.SNP.5:24897450 chr05:024897450 0 W/24897450-24897450 FN3790-S SNP G -> C AC=1;AN=190;BQB=0.933863;DP=2917;DP4=1201,1503,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00167524;MQSB=0.225074;RPB=0.999633;SGB=25.439;VDB=0.350064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.5:24914904 chr05:024914904 0 W/24914904-24914904 FN2665-S SNP A -> G AC=1;AN=200;BQB=0.752336;DP=4945;DP4=2549,2124,16,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000202224;MQB=5.61082e-10;MQSB=0.0983986;RPB=0.909789;SGB=60.747;VDB=0.18934;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.5:24925210 chr05:024925210 0 W/24925210-24925210 FN732-S Single Base Substitution C-T INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2620-S.SNP.5:24934456 chr05:024934456 0 W/24934456-24934456 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.11189;DP=2649;DP4=1260,856,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00868252;MQB=0.00545035;MQSB=3.87076e-11;RPB=0.782822;SGB=65.3149;VDB=0.0318486;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P3|122|LOC_Os05g42940|protein_coding|CODING|LOC_Os05g42940.1|1|1) FN3627-S.SNP.5:24954541 chr05:024954541 0 W/24954541-24954541 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.984127;DP=2172;DP4=921,1129,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22937e-05;MQSB=0.311102;RPB=0.949393;SGB=53.6492;VDB=0.529202;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.5:24956525 chr05:024956525 0 W/24956525-24956525 FN-285 Single Base Substitution G-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2573-S.SNP.5:24959191 chr05:024959191 0 W/24959191-24959191 FN2573-S SNP A -> T AC=1;AN=198;BQB=0.656852;DP=4139;DP4=2168,1764,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000241604;MQB=1.33901e-05;MQSB=0.00133589;RPB=0.454301;SGB=8.58354;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.5:24959192 chr05:024959192 0 W/24959192-24959192 FN2573-S SNP A -> T AC=1;AN=198;BQB=0.98337;DP=4151;DP4=2185,1757,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000240906;MQB=9.71367e-06;MQSB=0.00235743;RPB=0.715838;SGB=8.58354;VDB=0.682146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.5:24960088 chr05:024960088 0 W/24960088-24960088 FN2661-S SNP T -> C AC=1;AN=200;BQB=0.904938;DP=4827;DP4=2266,2348,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33504e-05;MQSB=0.785846;RPB=0.954255;SGB=31.2392;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.5:24963282 chr05:024963282 0 W/24963282-24963282 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.870435;DP=5289;DP4=2529,2517,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05337e-13;MQSB=0.981753;RPB=0.999475;SGB=42.5108;VDB=0.00818493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.5:24963283 chr05:024963283 0 W/24963283-24963283 FN2660-S SNP A -> T AC=1;AN=200;BQB=0.993073;DP=5304;DP4=2506,2540,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32985e-14;MQSB=0.984446;RPB=0.83857;SGB=19.1209;VDB=0.00868672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.5:24964164 chr05:024964164 0 W/24964164-24964164 FN3384-S SNP C -> A AC=1;AN=184;BQB=0.42226;DP=2642;DP4=1388,1140,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96716e-09;MQSB=0.0132681;RPB=0.988179;SGB=-13.6704;VDB=0.55842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.5:24970009 chr05:024970009 0 W/24970009-24970009 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.67166;DP=3165;DP4=1599,1433,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000214882;MQSB=0.904196;RPB=0.324836;SGB=30.6558;VDB=0.14548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A21T|171|LOC_Os05g42980|protein_coding|CODING|LOC_Os05g42980.1|1|1) FN3980-S.SNP.5:24976134 chr05:024976134 0 W/24976134-24976134 FN3980-S SNP G -> T AC=2;AN=168;BQB=0.946582;DP=3353;DP4=1712,1516,17,9;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0193856;MQB=8.2182e-12;MQSB=0.0218121;RPB=0.138288;SGB=48.9237;VDB=0.438789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R208L|927|LOC_Os05g43000|protein_coding|CODING|LOC_Os05g43000.1|1|1) FN4051-S.SNP.5:24976353 chr05:024976353 0 W/24976353-24976353 FN4051-S SNP C -> T AC=1;AN=168;BQB=0.976184;DP=4268;DP4=2487,1616,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0449859;MQB=0.758284;MQSB=0;RPB=0.95885;SGB=58.7637;VDB=0.447401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A281V|927|LOC_Os05g43000|protein_coding|CODING|LOC_Os05g43000.1|1|1) FN4229-S.SNP.5:24979318 chr05:024979318 0 W/24979318-24979318 FN4229-S SNP C -> A AC=2;AN=170;BQB=0.989347;DP=2788;DP4=1253,1456,12,13;HOB=0.0232526;ICB=0.494188;MQ=33;MQ0F=0.109397;MQB=0.984364;MQSB=5.95329e-30;RPB=0.983508;SGB=105.627;VDB=0.532353;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G127|889|LOC_Os05g43010|protein_coding|CODING|LOC_Os05g43010.1|1|1) FN2241-S.SNP.5:24990095 chr05:024990095 0 W/24990095-24990095 FN2241-S SNP T -> A AC=1;AN=188;BQB=0.253286;DP=4234;DP4=1889,2041,15,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64801e-11;MQSB=0.0246344;RPB=0.687593;SGB=31.3213;VDB=0.392116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.5:24990098 chr05:024990098 0 W/24990098-24990098 FN2241-S SNP T -> A AC=1;AN=188;BQB=0.866975;DP=4231;DP4=1895,2025,12,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000236351;MQB=6.34025e-10;MQSB=0.00984821;RPB=0.491475;SGB=62.7569;VDB=0.213204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.5:24990100 chr05:024990100 0 W/24990100-24990100 FN2241-S SNP G -> A AC=1;AN=188;BQB=0.000466105;DP=4219;DP4=1902,1986,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000237023;MQB=3.0824e-09;MQSB=0.00423795;RPB=0.936952;SGB=-11.5603;VDB=0.700733;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.5:25007397 chr05:025007397 0 W/25007397-25007397 FN4114-S SNP T -> A AC=1;AN=182;BQB=0.996155;DP=2964;DP4=1679,1220,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.28719e-07;MQSB=0.996685;RPB=0.660457;SGB=53.1331;VDB=0.838639;EFF=INTRON(MODIFIER||||1595|LOC_Os05g43060|protein_coding|CODING|LOC_Os05g43060.1|9|1) FN458-S.SNP.5:25014014 chr05:025014014 0 W/25014014-25014014 FN458-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g43060 retrotransposon, putative, centromere-specific, expressed SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN3814-S.SNP.5:25016770 chr05:025016770 0 W/25016770-25016770 FN3814-S SNP C -> T AC=1;AN=190;BQB=0.989192;DP=2609;DP4=1440,1089,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000245177;MQSB=0.998401;RPB=0.690886;SGB=21.7749;VDB=0.631962;EFF=INTRON(MODIFIER||||443|LOC_Os05g43070|protein_coding|CODING|LOC_Os05g43070.1|4|1) W360-2S-2.SNP.5:25025553 chr05:025025553 0 W/25025553-25025553 W360-2S-2 Single Base Substitution C-T INTRON HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN4224-S.SNP.5:25034048 chr05:025034048 0 W/25034048-25034048 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.948846;DP=2641;DP4=1372,1166,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.99593e-08;MQSB=0.992109;RPB=0.98742;SGB=38.3207;VDB=0.440098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.5:25057906 chr05:025057906 0 W/25057906-25057906 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.927099;DP=4581;DP4=2356,1949,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05842e-09;MQSB=0.654431;RPB=0.97812;SGB=31.3213;VDB=0.308786;EFF=INTRON(MODIFIER||||422|LOC_Os05g43170|protein_coding|CODING|LOC_Os05g43170.1|11|1) FN2241-S.SNP.5:25057907 chr05:025057907 0 W/25057907-25057907 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.933943;DP=4608;DP4=2380,1905,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000217014;MQB=2.83615e-11;MQSB=0.668975;RPB=0.930285;SGB=28.7675;VDB=0.0735894;EFF=INTRON(MODIFIER||||422|LOC_Os05g43170|protein_coding|CODING|LOC_Os05g43170.1|11|1) FN2241-S.SNP.5:25057909 chr05:025057909 0 W/25057909-25057909 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.67327;DP=4609;DP4=2376,1911,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.61392e-12;MQSB=0.581985;RPB=0.994736;SGB=11.8805;VDB=0.131345;EFF=INTRON(MODIFIER||||422|LOC_Os05g43170|protein_coding|CODING|LOC_Os05g43170.1|11|1) FN1730-S.SNP.5:25064616 chr05:025064616 0 W/25064616-25064616 FN1730-S SNP G -> A AC=1;AN=188;BQB=0.581071;DP=3553;DP4=1807,1683,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.057e-11;MQSB=0.976109;RPB=0.377959;SGB=-41.0182;VDB=0.46977;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.5:25066106 chr05:025066106 0 W/25066106-25066106 FN2349 SNP G -> A AC=1;AN=192;BQB=0.292114;DP=5229;DP4=2308,2558,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.03602e-07;MQSB=0.98175;RPB=0.94353;SGB=23.7852;VDB=0.983137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.5:25072775 chr05:025072775 0 W/25072775-25072775 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.618463;DP=4480;DP4=2124,2113,9,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0103e-14;MQSB=0.868916;RPB=0.558685;SGB=55.5366;VDB=0.670579;EFF=INTRON(MODIFIER||||250|LOC_Os05g43180|protein_coding|CODING|LOC_Os05g43180.1|1|1) FN450-S.SNP.5:25073339 chr05:025073339 0 W/25073339-25073339 FN450-S Single Base Substitution G-A INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN768-S.SNP.5:25075256 chr05:025075256 0 W/25075256-25075256 FN768-S Single Base Substitution T-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN-221.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN-221 Single Base Substitution G-T INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN1304-S.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN1304-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1541-S.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN1541-S Single Base Substitution G-T INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2364.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN2364 SNP G -> T AC=2;AN=192;BQB=0.570706;DP=5347;DP4=2515,2366,24,21;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0.0145876;MQB=0.995831;MQSB=1.57059e-10;RPB=0.0890183;SGB=150.275;VDB=0.165748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN3536-S SNP G -> T AC=2;AN=188;BQB=0.994139;DP=2875;DP4=1384,1352,10,11;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0153043;MQB=0.977629;MQSB=2.70507e-06;RPB=0.340109;SGB=89.8686;VDB=0.106614;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN728-S Single Base Substitution G-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN940-S.SNP.5:25080659 chr05:025080659 0 W/25080659-25080659 FN940-S Single Base Substitution G-T INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3529-S.SNP.5:25083235 chr05:025083235 0 W/25083235-25083235 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.9768;DP=2919;DP4=1580,1271,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=9.96672e-06;MQSB=0.207791;RPB=0.498584;SGB=39.8925;VDB=0.563606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.5:25084008 chr05:025084008 0 W/25084008-25084008 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN904-S.SNP.5:25086131 chr05:025086131 0 W/25086131-25086131 FN904-S Single Base Substitution G-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2162-S.SNP.5:25086221 chr05:025086221 0 W/25086221-25086221 FN2162-S SNP T -> C AC=1;AN=168;BQB=0.0867167;DP=2852;DP4=957,1841,8,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9161e-10;MQSB=0.968127;RPB=0.97727;SGB=-105.77;VDB=0.0232569;EFF=INTERGENIC(MODIFIER||||||||||1) FN998-S.SNP.5:25087452 chr05:025087452 0 W/25087452-25087452 FN998-S Single Base Substitution G-T INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3430-S.SNP.5:25087505 chr05:025087505 0 W/25087505-25087505 FN3430-S SNP G -> A AC=2;AN=184;BQB=0.999627;DP=2869;DP4=1286,1486,12,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.48661e-12;MQSB=0.96278;RPB=0.136447;SGB=89.4385;VDB=0.353242;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.5:25089931 chr05:025089931 0 W/25089931-25089931 FN-234 Single Base Substitution A-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2339.SNP.5:25097864 chr05:025097864 0 W/25097864-25097864 FN2339 SNP C -> T AC=2;AN=192;BQB=0.451168;DP=4730;DP4=2053,2303,13,31;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.66224e-15;MQSB=0.819732;RPB=0.600424;SGB=49.5922;VDB=0.383714;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.5:25097864 chr05:025097864 0 W/25097864-25097864 FN874-S Single Base Substitution C-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN926-S.SNP.5:25099064 chr05:025099064 0 W/25099064-25099064 FN926-S Single Base Substitution T-G INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3825-S.SNP.5:25100211 chr05:025100211 0 W/25100211-25100211 FN3825-S SNP A -> T AC=1;AN=190;BQB=0.996665;DP=3190;DP4=1531,1472,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15137e-05;MQSB=0.770667;RPB=0.691711;SGB=25.439;VDB=0.422799;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.5:25102562 chr05:025102562 0 W/25102562-25102562 FN-146 Single Base Substitution C-G INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1545-S.SNP.5:25103579 chr05:025103579 0 W/25103579-25103579 FN1545-S Single Base Substitution T-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN3325-S.SNP.5:25111390 chr05:025111390 0 W/25111390-25111390 FN3325-S SNP G -> T AC=1;AN=184;BQB=0.896871;DP=4461;DP4=2012,2341,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0520063;MQB=0.941478;MQSB=0.0765014;RPB=0.294253;SGB=48.7425;VDB=0.128426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.5:25111653 chr05:025111653 0 W/25111653-25111653 FN2724-S SNP T -> C AC=1;AN=200;BQB=0.0259387;DP=4375;DP4=2142,1987,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26686e-06;MQSB=0.787477;RPB=0.989328;SGB=-34.1311;VDB=0.58437;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.5:25116227 chr05:025116227 0 W/25116227-25116227 FN185-2_3_4 SNP C -> A AC=1;AN=188;BQB=0.185474;DP=2731;DP4=1362,1321,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.84021e-05;MQSB=0.996524;RPB=0.780852;SGB=-76.6136;VDB=0.833827;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.5:25116228 chr05:025116228 0 W/25116228-25116228 FN185-2_3_4 SNP C -> A AC=1;AN=188;BQB=0.790643;DP=2723;DP4=1348,1334,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23858e-06;MQSB=0.992837;RPB=0.78025;SGB=13.3597;VDB=0.918943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.5:25122961 chr05:025122961 0 W/25122961-25122961 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.982488;DP=2322;DP4=1148,1059,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.05086e-07;MQSB=0.834648;RPB=0.362584;SGB=62.7569;VDB=0.185215;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.5:25126617 chr05:025126617 0 W/25126617-25126617 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.879132;DP=2220;DP4=1031,1102,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.83356e-09;MQSB=0.0847418;RPB=0.998526;SGB=61.2001;VDB=0.711884;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.5:25128559 chr05:025128559 0 W/25128559-25128559 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.348598;DP=2454;DP4=1168,1167,11,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.61057e-05;MQSB=0.99635;RPB=0.441864;SGB=40.8124;VDB=0.894197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.5:25133209 chr05:025133209 0 W/25133209-25133209 FN1439-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2209-S.SNP.5:25137125 chr05:025137125 0 W/25137125-25137125 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.000782306;DP=5074;DP4=2419,2283,40,36;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00630666;MQB=0;MQSB=0.512125;RPB=2.34717e-24;SGB=-1348.45;VDB=4.32423e-08;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W1037*|1211|LOC_Os05g43220|protein_coding|CODING|LOC_Os05g43220.1|3|1) FN2150-S.SNP.5:25148910 chr05:025148910 0 W/25148910-25148910 FN2150-S SNP A -> G AC=2;AN=168;BQB=0.0511846;DP=3561;DP4=1781,1706,22,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.7066e-14;MQSB=0.801161;RPB=0.895614;SGB=-194.301;VDB=0.990251;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.5:25149113 chr05:025149113 0 W/25149113-25149113 FN1536-S Single Base Substitution C-G INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3795-S.SNP.5:25166523 chr05:025166523 0 W/25166523-25166523 FN3795-S SNP T -> A AC=1;AN=190;BQB=0.974497;DP=2583;DP4=1161,1314,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.63683e-08;MQSB=0.995271;RPB=0.31334;SGB=39.6545;VDB=0.500099;EFF=UTR_5_PRIME(MODIFIER||510||711|LOC_Os05g43252|protein_coding|CODING|LOC_Os05g43252.2|3|1),UTR_5_PRIME(MODIFIER||510||711|LOC_Os05g43252|protein_coding|CODING|LOC_Os05g43252.1|3|1) FN2089-S.SNP.5:25169985 chr05:025169985 0 W/25169985-25169985 FN2089-S SNP C -> A AC=1;AN=168;BQB=0.824484;DP=3366;DP4=1248,2081,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.1695e-08;MQSB=0.834993;RPB=0.777009;SGB=19.7539;VDB=0.643938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.5:25184426 chr05:025184426 0 W/25184426-25184426 FN1281-S Single Base Substitution G-A INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2464.SNP.5:25187870 chr05:025187870 0 W/25187870-25187870 FN2464 SNP C -> T AC=1;AN=200;BQB=0.448285;DP=4977;DP4=1917,2685,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36302e-12;MQSB=0.946599;RPB=0.98986;SGB=20.7261;VDB=0.994713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.5:25189657 chr05:025189657 0 W/25189657-25189657 FN3753-S SNP T -> A AC=2;AN=190;BQB=0.77043;DP=2899;DP4=1344,1403,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.90489e-14;MQSB=0.985576;RPB=0.920229;SGB=121.957;VDB=0.347253;EFF=INTRON(MODIFIER||||480|LOC_Os05g43300|protein_coding|CODING|LOC_Os05g43300.1|2|1),INTRON(MODIFIER||||361|LOC_Os05g43300|protein_coding|CODING|LOC_Os05g43300.2|2|1),INTRON(MODIFIER||||455|LOC_Os05g43300|protein_coding|CODING|LOC_Os05g43300.3|2|1) FN1351-S.SNP.5:25193195 chr05:025193195 0 W/25193195-25193195 FN1351-S Single Base Substitution G-A INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3356-S.SNP.5:25198131 chr05:025198131 0 W/25198131-25198131 FN3356-S SNP A -> T AC=1;AN=184;BQB=0.0625925;DP=2035;DP4=1083,807,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0461916;MQB=0.373109;MQSB=3.85043e-21;RPB=0.851977;SGB=-2.32838;VDB=0.307759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.5:25200322 chr05:025200322 0 W/25200322-25200322 FN3323-S SNP T -> C AC=1;AN=184;BQB=0.976776;DP=3102;DP4=1408,1600,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.0431979;MQB=0.999628;MQSB=0;RPB=0.999964;SGB=23.2751;VDB=0.549422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.5:25207288 chr05:025207288 0 W/25207288-25207288 FN3283-S SNP C -> T AC=2;AN=184;BQB=0.963033;DP=2742;DP4=1229,1427,8,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.8742e-10;MQSB=0.994433;RPB=0.248105;SGB=62.3078;VDB=0.160793;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q759*|773|LOC_Os05g43340|protein_coding|CODING|LOC_Os05g43340.1|6|1) FN2385.SNP.5:25225164 chr05:025225164 0 W/25225164-25225164 FN2385 SNP G -> A AC=1;AN=192;BQB=0.851354;DP=4817;DP4=2378,2150,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.20877e-16;MQSB=0.965559;RPB=0.5927;SGB=89.6809;VDB=0.0999266;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D360|374|LOC_Os05g43380|protein_coding|CODING|LOC_Os05g43380.1|6|1),UTR_3_PRIME(MODIFIER||518||230|LOC_Os05g43380|protein_coding|CODING|LOC_Os05g43380.2|5|1) FN2609-S.SNP.5:25226866 chr05:025226866 0 W/25226866-25226866 FN2609-S SNP C -> G AC=1;AN=198;BQB=0.0541501;DP=4068;DP4=1802,2050,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.54871e-13;MQSB=0.924097;RPB=0.511308;SGB=90.9049;VDB=0.0997073;EFF=INTRON(MODIFIER||||374|LOC_Os05g43380|protein_coding|CODING|LOC_Os05g43380.1|2|1),INTRON(MODIFIER||||230|LOC_Os05g43380|protein_coding|CODING|LOC_Os05g43380.2|2|1) FN1319-S.SNP.5:25231421 chr05:025231421 0 W/25231421-25231421 FN1319-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g43390 signal recognition particle 54 kDa protein, putative, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN801-S.SNP.5:25233653 chr05:025233653 0 W/25233653-25233653 FN801-S Single Base Substitution C-T INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1627-S.SNP.5:25234278 chr05:025234278 0 W/25234278-25234278 FN1627-S Single Base Substitution T-C INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN780-S.SNP.5:25236122 chr05:025236122 0 W/25236122-25236122 FN780-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g43400 expressed protein SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1433-S.SNP.5:25243184 chr05:025243184 0 W/25243184-25243184 FN1433-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN3533-S.SNP.5:25245078 chr05:025245078 0 W/25245078-25245078 FN3533-S SNP A -> G AC=2;AN=188;BQB=0.999562;DP=4397;DP4=2215,1975,21,19;HOB=0.0210502;ICB=0.494738;MQ=35;MQ0F=0.0527632;MQB=0.925662;MQSB=0.410642;RPB=0.968226;SGB=-1.96068;VDB=0.257666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T1825A|1943|LOC_Os05g43410|protein_coding|CODING|LOC_Os05g43410.1|5|1) FN2388.SNP.5:25251009 chr05:025251009 0 W/25251009-25251009 FN2388 SNP G -> A AC=1;AN=200;BQB=0.493441;DP=4495;DP4=2068,2004,18,13;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0743048;MQB=0.00724295;MQSB=3.96232e-28;RPB=0.828417;SGB=65.9573;VDB=0.367034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.5:25256675 chr05:025256675 0 W/25256675-25256675 FN2682-S SNP C -> T AC=2;AN=200;BQB=0.990252;DP=4961;DP4=2376,2292,20,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.18638e-15;MQSB=0.679032;RPB=0.887437;SGB=28.752;VDB=0.767454;EFF=INTRON(MODIFIER||||206|LOC_Os05g43440|protein_coding|CODING|LOC_Os05g43440.1|7|1) FN_398-1.SNP.5:25260058 chr05:025260058 0 W/25260058-25260058 FN_398-1 Single Base Substitution G-A INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN4174-S.SNP.5:25264595 chr05:025264595 0 W/25264595-25264595 FN4174-S SNP T -> C AC=1;AN=170;BQB=0.938474;DP=2891;DP4=1270,1477,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0441e-08;MQSB=0.808602;RPB=0.97362;SGB=48.6486;VDB=0.0532542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.5:25270110 chr05:025270110 0 W/25270110-25270110 FN2566-S SNP C -> A AC=1;AN=198;BQB=0.999983;DP=4488;DP4=2184,2080,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000222816;MQB=1.90839e-07;MQSB=0.985367;RPB=0.763957;SGB=13.7737;VDB=0.914019;EFF=SPLICE_SITE_DONOR(HIGH||||361|LOC_Os05g43470|protein_coding|CODING|LOC_Os05g43470.1|7|1),INTRON(MODIFIER||||361|LOC_Os05g43470|protein_coding|CODING|LOC_Os05g43470.1|7|1);LOF=(LOC_Os05g43470|LOC_Os05g43470|1|1.00) FN2347.SNP.5:25281276 chr05:025281276 0 W/25281276-25281276 FN2347 SNP T -> C AC=2;AN=192;BQB=0.925911;DP=5427;DP4=2369,2752,28,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.75749e-37;MQSB=0.992604;RPB=0.699779;SGB=152.003;VDB=0.0410348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.5:25283297 chr05:025283297 0 W/25283297-25283297 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.976314;DP=3185;DP4=1346,1607,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000313972;MQB=1.2261e-07;MQSB=0.332892;RPB=0.6447;SGB=49.5489;VDB=0.0649479;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R37|412|LOC_Os05g43490|protein_coding|CODING|LOC_Os05g43490.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R37|412|LOC_Os05g43490|protein_coding|CODING|LOC_Os05g43490.2|1|1) FN1067-S.SNP.5:25289523 chr05:025289523 0 W/25289523-25289523 FN1067-S Single Base Substitution A-G INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2323.SNP.5:25289859 chr05:025289859 0 W/25289859-25289859 FN2323 SNP C -> T AC=1;AN=192;BQB=0.951615;DP=4589;DP4=2130,2106,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0017433;MQB=0.0115268;MQSB=0.00049954;RPB=0.240673;SGB=78.9878;VDB=0.0561238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.5:25294100 chr05:025294100 0 W/25294100-25294100 FN1760-S SNP C -> T AC=1;AN=188;BQB=0.307147;DP=3886;DP4=2425,1404,19,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45147e-18;MQSB=0.990302;RPB=0.73672;SGB=28.6876;VDB=0.0739547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.5:25302849 chr05:025302849 0 W/25302849-25302849 FN3865-S SNP T -> C AC=1;AN=158;BQB=0.995134;DP=2846;DP4=1503,1268,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.09569e-09;MQSB=0.999526;RPB=0.996533;SGB=64.5449;VDB=0.396378;EFF=INTRON(MODIFIER||||688|LOC_Os05g43530|protein_coding|CODING|LOC_Os05g43530.1|2|1) FN3831-S.SNP.5:25305144 chr05:025305144 0 W/25305144-25305144 FN3831-S SNP T -> A AC=1;AN=190;BQB=0.760872;DP=2969;DP4=1639,1116,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19389e-11;MQSB=0.993785;RPB=0.839342;SGB=11.8805;VDB=0.381998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.5:25305598 chr05:025305598 0 W/25305598-25305598 FN2198-S SNP A -> T AC=1;AN=190;BQB=0.609329;DP=4169;DP4=2316,1556,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000239866;MQB=1.2195e-07;MQSB=0.0340111;RPB=0.997116;SGB=21.1058;VDB=0.260041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.5:25322312 chr05:025322312 0 W/25322312-25322312 FN1596-S Single Base Substitution C-T INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN420-S.SNP.5:25330214 chr05:025330214 0 W/25330214-25330214 FN420-S Single Base Substitution A-G INTRON HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2652-S.SNP.5:25335409 chr05:025335409 0 W/25335409-25335409 FN2652-S SNP G -> A AC=2;AN=200;BQB=0.877238;DP=5100;DP4=2285,2508,24,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.05768e-27;MQSB=0.952153;RPB=0.846684;SGB=6.25521;VDB=0.543905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H233Y|556|LOC_Os05g43570|protein_coding|CODING|LOC_Os05g43570.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H233Y|556|LOC_Os05g43570|protein_coding|CODING|LOC_Os05g43570.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H233Y|556|LOC_Os05g43570|protein_coding|CODING|LOC_Os05g43570.3|5|1) FN1205-S.SNP.5:25337214 chr05:025337214 0 W/25337214-25337214 FN1205-S Single Base Substitution T-G INTRON HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN4064-S.SNP.5:25342216 chr05:025342216 0 W/25342216-25342216 FN4064-S SNP G -> T AC=1;AN=168;BQB=0.804242;DP=2635;DP4=1183,1358,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.68401e-08;MQSB=0.914611;RPB=0.96916;SGB=19.7539;VDB=0.0244334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.5:25350345 chr05:025350345 0 W/25350345-25350345 FN4160-S SNP C -> T AC=1;AN=170;BQB=0.969135;DP=2602;DP4=998,1524,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.99127e-06;MQSB=0.99988;RPB=0.966477;SGB=34.5445;VDB=0.930012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.5:25355636 chr05:025355636 0 W/25355636-25355636 FN3474-S SNP C -> A AC=1;AN=184;BQB=0.882304;DP=2891;DP4=1447,1360,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.65223e-10;MQSB=0.99643;RPB=0.991876;SGB=62.3078;VDB=0.791625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H49N|90|LOC_Os05g43600|protein_coding|CODING|LOC_Os05g43600.1|2|1) FN3332-S.SNP.5:25382903 chr05:025382903 0 W/25382903-25382903 FN3332-S SNP G -> A AC=1;AN=184;BQB=0.611617;DP=3472;DP4=1841,1529,15,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62264e-14;MQSB=0.991546;RPB=0.536851;SGB=95.6183;VDB=0.799081;EFF=INTRON(MODIFIER||||442|LOC_Os05g43650|protein_coding|CODING|LOC_Os05g43650.1|2|1) FN_N1-151-7.SNP.5:25383252 chr05:025383252 0 W/25383252-25383252 FN_N1-151-7 Single Base Substitution T-G HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1162-S.SNP.5:25392827 chr05:025392827 0 W/25392827-25392827 FN1162-S Single Base Substitution C-T INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3820-S.SNP.5:25405637 chr05:025405637 0 W/25405637-25405637 FN3820-S SNP A -> T AC=1;AN=190;BQB=0.822748;DP=2939;DP4=1300,1511,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94946e-05;MQSB=0.660422;RPB=0.103924;SGB=32.5467;VDB=0.168856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.5:25409108 chr05:025409108 0 W/25409108-25409108 FN3294-S SNP C -> A AC=1;AN=184;BQB=0.95265;DP=2771;DP4=1393,1307,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.39577e-06;MQSB=0.986233;RPB=0.974677;SGB=48.7425;VDB=0.604147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.5:25410734 chr05:025410734 0 W/25410734-25410734 FN3568-S SNP A -> G AC=2;AN=188;BQB=0.980584;DP=2404;DP4=1117,1163,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.10921e-13;MQSB=0.747014;RPB=0.678493;SGB=103.498;VDB=0.382161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.5:25419405 chr05:025419405 0 W/25419405-25419405 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.465646;DP=5301;DP4=2461,2520,23,30;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.167138;MQB=0.99587;MQSB=0;RPB=0.35081;SGB=238.471;VDB=0.203509;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A542|1764|LOC_Os05g43730|protein_coding|CODING|LOC_Os05g43730.1|2|1) FN2621-S.SNP.5:25426608 chr05:025426608 0 W/25426608-25426608 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.733158;DP=4195;DP4=2062,1889,13,6;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.034565;MQB=0.9686;MQSB=2.32289e-11;RPB=0.586596;SGB=34.6953;VDB=0.131978;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G350|900|LOC_Os05g43740|protein_coding|CODING|LOC_Os05g43740.1|1|1) FN2558-S.SNP.5:25440489 chr05:025440489 0 W/25440489-25440489 FN2558-S SNP T -> C AC=1;AN=198;BQB=0.908698;DP=3913;DP4=1852,1761,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.46443e-11;MQSB=0.725946;RPB=0.970666;SGB=86.3098;VDB=0.216052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.5:25452449 chr05:025452449 0 W/25452449-25452449 FN2267-S SNP T -> C AC=1;AN=190;BQB=0.975624;DP=5034;DP4=1979,2715,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198649;MQB=9.14371e-10;MQSB=0.0112939;RPB=0.782921;SGB=57.4238;VDB=0.795705;EFF=UTR_3_PRIME(MODIFIER||430||366|LOC_Os05g43770|protein_coding|CODING|LOC_Os05g43770.1|10|1) FN2703-S.SNP.5:25455100 chr05:025455100 0 W/25455100-25455100 FN2703-S SNP C -> T AC=2;AN=200;BQB=0.10525;DP=5098;DP4=2434,2363,19,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.36777e-26;MQSB=0.978169;RPB=0.53078;SGB=123.271;VDB=0.845215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P92L|386|LOC_Os05g43780|protein_coding|CODING|LOC_Os05g43780.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P68L|362|LOC_Os05g43780|protein_coding|CODING|LOC_Os05g43780.2|3|1) FN2539-S.SNP.5:25455985 chr05:025455985 0 W/25455985-25455985 FN2539-S SNP A -> T AC=1;AN=198;BQB=0.667117;DP=4238;DP4=2115,1902,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.59744e-08;MQSB=0.997534;RPB=0.847894;SGB=36.5539;VDB=0.117091;EFF=INTRON(MODIFIER||||386|LOC_Os05g43780|protein_coding|CODING|LOC_Os05g43780.1|5|1),INTRON(MODIFIER||||362|LOC_Os05g43780|protein_coding|CODING|LOC_Os05g43780.2|4|1) FN4149-S.SNP.5:25458455 chr05:025458455 0 W/25458455-25458455 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.9316;DP=2400;DP4=1296,1018,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.34045e-05;MQSB=0.660203;RPB=0.692985;SGB=34.5445;VDB=0.993118;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.5:25459045 chr05:025459045 0 W/25459045-25459045 FN858-S Single Base Substitution C-T INTRON HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3795-S.SNP.5:25462042 chr05:025462042 0 W/25462042-25462042 FN3795-S SNP G -> T AC=1;AN=190;BQB=0.58675;DP=2382;DP4=1169,1138,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.47084e-07;MQSB=0.987643;RPB=0.67446;SGB=71.8647;VDB=0.861354;EFF=UTR_3_PRIME(MODIFIER||585||316|LOC_Os05g43790|protein_coding|CODING|LOC_Os05g43790.2|8|1),UTR_3_PRIME(MODIFIER||377||354|LOC_Os05g43790|protein_coding|CODING|LOC_Os05g43790.1|9|1) FN2302.SNP.5:25468751 chr05:025468751 0 W/25468751-25468751 FN2302 SNP G -> C AC=1;AN=192;BQB=0.996475;DP=4725;DP4=2308,2146,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.92982e-18;MQSB=0.999718;RPB=0.956;SGB=67.3792;VDB=0.586463;EFF=INTRON(MODIFIER||||765|LOC_Os05g43810|protein_coding|CODING|LOC_Os05g43810.1|3|1) FN1027-S.SNP.5:25488172 chr05:025488172 0 W/25488172-25488172 FN1027-S Single Base Substitution A-T INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN804-S.SNP.5:25488994 chr05:025488994 0 W/25488994-25488994 FN804-S Single Base Substitution C-A INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN989-S.SNP.5:25499498 chr05:025499498 0 W/25499498-25499498 FN989-S Single Base Substitution C-T INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2300.SNP.5:25513621 chr05:025513621 0 W/25513621-25513621 FN2300 SNP A -> T AC=1;AN=192;BQB=0.842441;DP=4710;DP4=2203,2248,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.51906e-12;MQSB=0.434872;RPB=0.897046;SGB=19.8696;VDB=0.512455;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.5:25513621 chr05:025513621 0 W/25513621-25513621 FN520-S Single Base Substitution A-T INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2312.SNP.5:25520006 chr05:025520006 0 W/25520006-25520006 FN2312 SNP G -> A AC=1;AN=192;BQB=0.649389;DP=4714;DP4=2579,1901,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01491e-09;MQSB=0.7806;RPB=0.807989;SGB=90.2896;VDB=0.688488;EFF=INTERGENIC(MODIFIER||||||||||1) FN871-S.SNP.5:25522724 chr05:025522724 0 W/25522724-25522724 FN871-S Single Base Substitution T-C INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2742-S.SNP.5:25526477 chr05:025526477 0 W/25526477-25526477 FN2742-S SNP T -> G AC=1;AN=200;BQB=0.103787;DP=5158;DP4=2222,2723,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.61285e-17;MQSB=0.871577;RPB=0.96917;SGB=137.158;VDB=0.969753;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.5:25534624 chr05:025534624 0 W/25534624-25534624 FN-306 Single Base Substitution G-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1658-S.SNP.5:25539264 chr05:025539264 0 W/25539264-25539264 FN1658-S SNP C -> T AC=1;AN=188;BQB=0.277863;DP=3104;DP4=1779,1294,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000322165;MQB=1.49575e-07;MQSB=0.0384418;RPB=0.835178;SGB=-53.1623;VDB=0.711269;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.5:25545484 chr05:025545484 0 W/25545484-25545484 FN4188-S SNP G -> A AC=1;AN=170;BQB=0.817667;DP=2467;DP4=853,1343,11,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.86809e-12;MQSB=0.827466;RPB=0.999927;SGB=-39.8851;VDB=0.363669;EFF=INTRON(MODIFIER||||522|LOC_Os05g43910|protein_coding|CODING|LOC_Os05g43910.1|2|1) FN-246.SNP.5:25552838 chr05:025552838 0 W/25552838-25552838 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-246.SNP.5:25552846 chr05:025552846 0 W/25552846-25552846 FN-246 Single Base Substitution A-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN4038-S.SNP.5:25560691 chr05:025560691 0 W/25560691-25560691 FN4038-S SNP A -> T AC=1;AN=168;BQB=0.983401;DP=2570;DP4=1286,1150,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.2142e-10;MQSB=0.973569;RPB=0.673199;SGB=29.4772;VDB=0.0784513;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q472L|699|LOC_Os05g43920|protein_coding|CODING|LOC_Os05g43920.1|10|1) FN560-S.SNP.5:25562992 chr05:025562992 0 W/25562992-25562992 FN560-S Single Base Substitution A-T INTERGENIC HET SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3691-S.SNP.5:25568441 chr05:025568441 0 W/25568441-25568441 FN3691-S SNP G -> T AC=1;AN=190;BQB=0.905866;DP=2464;DP4=1282,1107,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61646e-05;MQSB=0.946587;RPB=0.914255;SGB=30.8803;VDB=0.657519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.5:25568686 chr05:025568686 0 W/25568686-25568686 FN1522-S Single Base Substitution G-A INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN4304-S.SNP.5:25591113 chr05:025591113 0 W/25591113-25591113 FN4304-S SNP G -> A AC=1;AN=170;BQB=0.9973;DP=2424;DP4=1170,1202,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23029e-08;MQSB=0.278775;RPB=0.741113;SGB=56.7575;VDB=0.668518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.5:25595904 chr05:025595904 0 W/25595904-25595904 FN1575-S Single Base Substitution C-G INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3849-S.SNP.5:25603429 chr05:025603429 0 W/25603429-25603429 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.790346;DP=2773;DP4=1297,1376,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=31;MQ0F=0.146051;MQB=0.387682;MQSB=0.941228;RPB=0.45698;SGB=27.3346;VDB=0.22041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S257N|727|LOC_Os05g44010|protein_coding|CODING|LOC_Os05g44010.1|3|1) FN2588-S.SNP.5:25606288 chr05:025606288 0 W/25606288-25606288 FN2588-S SNP G -> A AC=2;AN=198;BQB=0.562746;DP=4464;DP4=2074,2088,24,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.25568e-18;MQSB=0.0370997;RPB=0.457636;SGB=99.4126;VDB=0.0562558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.5:25614335 chr05:025614335 0 W/25614335-25614335 FN1631-S Single Base Substitution C-T INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1631-S.SNP.5:25614336 chr05:025614336 0 W/25614336-25614336 FN1631-S Single Base Substitution G-T INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN536-S.SNP.5:25617525 chr05:025617525 0 W/25617525-25617525 FN536-S Single Base Substitution T-A INTRON HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN464-S.SNP.5:25618204 chr05:025618204 0 W/25618204-25618204 FN464-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g44030 protein kinase, putative, expressed SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3401-S.SNP.5:25618703 chr05:025618703 0 W/25618703-25618703 FN3401-S SNP T -> C AC=2;AN=184;BQB=0.998347;DP=1591;DP4=994,529,18,4;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=8.88416e-11;MQSB=0.00179152;RPB=0.64724;SGB=93.9603;VDB=0.71803;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.5:25625627 chr05:025625627 0 W/25625627-25625627 FN712-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g44070 ras-related protein, putative, expressed SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1162-S.SNP.5:25633456 chr05:025633456 0 W/25633456-25633456 FN1162-S Single Base Substitution C-T INTRON HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1749-S.SNP.5:25636699 chr05:025636699 0 W/25636699-25636699 FN1749-S SNP C -> T AC=2;AN=188;BQB=0.441208;DP=1836;DP4=828,845,10,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.39333e-10;MQSB=0.479285;RPB=0.931245;SGB=78.5038;VDB=0.838447;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A72T|316|LOC_Os05g44090|protein_coding|CODING|LOC_Os05g44090.1|1|1) FN2220-S.SNP.5:25641595 chr05:025641595 0 W/25641595-25641595 FN2220-S SNP G -> T AC=1;AN=190;BQB=0.937263;DP=3732;DP4=1323,2103,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000500854;MQSB=0.000174069;RPB=0.970568;SGB=39.6545;VDB=0.591114;EFF=UTR_5_PRIME(MODIFIER||174||899|LOC_Os05g44100|protein_coding|CODING|LOC_Os05g44100.1|1|1) FN798-S.SNP.5:25642582 chr05:025642582 0 W/25642582-25642582 FN798-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1274-S.SNP.5:25643062 chr05:025643062 0 W/25643062-25643062 FN1274-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g44100 trehalose synthase, putative, expressed SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1080-S.SNP.5:25643240 chr05:025643240 0 W/25643240-25643240 FN1080-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g44100 trehalose synthase, putative, expressed SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1071-S.SNP.5:25645264 chr05:025645264 0 W/25645264-25645264 FN1071-S Single Base Substitution C-A INTRON HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3330-S.SNP.5:25647347 chr05:025647347 0 W/25647347-25647347 FN3330-S SNP G -> T AC=1;AN=184;BQB=0.82131;DP=2836;DP4=1224,1527,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93819e-08;MQSB=0.949299;RPB=0.554675;SGB=23.2751;VDB=0.611881;EFF=INTRON(MODIFIER||||316|LOC_Os05g44110|protein_coding|CODING|LOC_Os05g44110.1|2|1) W453-3-1.SNP.5:25657993 chr05:025657993 0 W/25657993-25657993 W453-3-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN4052-S.SNP.5:25658014 chr05:025658014 0 W/25658014-25658014 FN4052-S SNP A -> T AC=1;AN=168;BQB=0.950512;DP=2571;DP4=1409,1044,14,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.37829e-10;MQSB=0.811098;RPB=0.835919;SGB=36.7696;VDB=0.380473;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.5:25676760 chr05:025676760 0 W/25676760-25676760 FN-377 Single Base Substitution C-T INTERGENIC HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1438-S.SNP.5:25676760 chr05:025676760 0 W/25676760-25676760 FN1438-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2711-S.SNP.5:25676760 chr05:025676760 0 W/25676760-25676760 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.815214;DP=4832;DP4=2217,2314,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.85873e-10;MQSB=0.918754;RPB=0.025786;SGB=81.8956;VDB=0.170229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.5:25684646 chr05:025684646 0 W/25684646-25684646 FN3285-S SNP T -> C AC=1;AN=184;BQB=0.753061;DP=3991;DP4=2028,1764,15,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25484e-14;MQSB=0.36082;RPB=0.202777;SGB=-7.93076;VDB=0.0079665;EFF=INTRON(MODIFIER||||365|LOC_Os05g44200|protein_coding|CODING|LOC_Os05g44200.1|1|1) FN700-S.SNP.5:25688122 chr05:025688122 0 W/25688122-25688122 FN700-S Single Base Substitution C-T INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1129-S.SNP.5:25691902 chr05:025691902 0 W/25691902-25691902 FN1129-S Single Base Substitution G-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1916.SNP.5:25695272 chr05:025695272 0 W/25695272-25695272 FN1916 Single Base Substitution T-C HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN-3.SNP.5:25704878 chr05:025704878 0 W/25704878-25704878 FN-3 Single Base Substitution G-T INTERGENIC Homo SNo: 3, Mutant_ID: FN-3, Generation: M2, Mutations: 22, Genes: 29, Seed availability: Yes. FN2588-S.SNP.5:25704994 chr05:025704994 0 W/25704994-25704994 FN2588-S SNP T -> G AC=2;AN=198;BQB=0.992869;DP=4266;DP4=2096,1968,19,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.19005e-19;MQSB=0.996525;RPB=0.0481663;SGB=76.0565;VDB=0.475413;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.5:25708802 chr05:025708802 0 W/25708802-25708802 FN517-S Single Base Substitution T-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2385.SNP.5:25711245 chr05:025711245 0 W/25711245-25711245 FN2385 SNP G -> A AC=1;AN=192;BQB=0.652884;DP=4825;DP4=2211,2281,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.94503e-11;MQSB=0.820092;RPB=0.984405;SGB=31.4783;VDB=0.0792407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.5:25719034 chr05:025719034 0 W/25719034-25719034 FN3380-S SNP A -> T AC=1;AN=184;BQB=0.857421;DP=2809;DP4=1404,1278,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.63629e-10;MQSB=0.941082;RPB=0.990173;SGB=35.884;VDB=0.0261029;EFF=INTRON(MODIFIER||||859|LOC_Os05g44210|protein_coding|CODING|LOC_Os05g44210.1|11|1),INTRON(MODIFIER||||475|LOC_Os05g44210|protein_coding|CODING|LOC_Os05g44210.2|11|1) FN3806-S.SNP.5:25725399 chr05:025725399 0 W/25725399-25725399 FN3806-S SNP T -> A AC=1;AN=190;BQB=0.776321;DP=2692;DP4=1353,1214,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.08871e-06;MQSB=0.898741;RPB=0.0983544;SGB=28.9929;VDB=0.258967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.5:25725566 chr05:025725566 0 W/25725566-25725566 FN1707-S SNP T -> C AC=2;AN=188;BQB=0.000140489;DP=3683;DP4=1875,1755,16,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.56296e-09;MQSB=0.827401;RPB=0.446416;SGB=-103.637;VDB=0.69805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.5:25730800 chr05:025730800 0 W/25730800-25730800 FN-356 Single Base Substitution A-G INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3540-S.SNP.5:25731407 chr05:025731407 0 W/25731407-25731407 FN3540-S SNP C -> T AC=2;AN=188;BQB=0.953848;DP=2232;DP4=810,1307,9,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.13409e-15;MQSB=0.0125309;RPB=0.381392;SGB=-7.39363;VDB=0.599982;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.5:25734424 chr05:025734424 0 W/25734424-25734424 FN391-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g44240 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2529-S.SNP.5:25737179 chr05:025737179 0 W/25737179-25737179 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.95134;DP=3870;DP4=2012,1644,16,6;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0178295;MQB=0.000104083;MQSB=0.0911415;RPB=0.839537;SGB=95.5;VDB=0.674934;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.5:25737320 chr05:025737320 0 W/25737320-25737320 FN3518-S SNP C -> T AC=2;AN=188;BQB=0.993318;DP=3148;DP4=1567,1428,12,12;HOB=0.0210502;ICB=0.494738;MQ=23;MQ0F=0.214422;MQB=0.567611;MQSB=0;RPB=0.139612;SGB=103.498;VDB=0.180717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.5:25744401 chr05:025744401 0 W/25744401-25744401 FN1024-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-208.SNP.5:25748089 chr05:025748089 0 W/25748089-25748089 FN-208 Single Base Substitution C-T INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2658-S.SNP.5:25749517 chr05:025749517 0 W/25749517-25749517 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.994574;DP=5098;DP4=2300,2444,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76513e-15;MQSB=0.679609;RPB=0.963168;SGB=52.9314;VDB=0.958345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.5:25752969 chr05:025752969 0 W/25752969-25752969 FN3820-S SNP G -> A AC=2;AN=190;BQB=0.714137;DP=2705;DP4=1356,1223,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.76259e-16;MQSB=0.945406;RPB=0.203804;SGB=100.07;VDB=0.74377;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.5:25756031 chr05:025756031 0 W/25756031-25756031 FN4016-S SNP C -> A AC=2;AN=168;BQB=0.990271;DP=3213;DP4=1686,1320,29,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.16909e-25;MQSB=0.641965;RPB=0.920013;SGB=48.546;VDB=0.524733;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.5:25756704 chr05:025756704 0 W/25756704-25756704 FN276-S Single Base Substitution A-T INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3828-S.SNP.5:25757787 chr05:025757787 0 W/25757787-25757787 FN3828-S SNP T -> C AC=1;AN=190;BQB=0.481838;DP=2859;DP4=1335,1411,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.14892e-05;MQSB=0.594465;RPB=0.573262;SGB=28.9929;VDB=0.819359;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.5:25758696 chr05:025758696 0 W/25758696-25758696 FN4136-S SNP G -> T AC=1;AN=170;BQB=0.999894;DP=2656;DP4=1239,1343,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.84095e-12;MQSB=0.989138;RPB=0.596676;SGB=78.9707;VDB=0.245144;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.5:25758697 chr05:025758697 0 W/25758697-25758697 FN4136-S SNP T -> C AC=1;AN=170;BQB=0.999987;DP=2648;DP4=1185,1324,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.09533e-11;MQSB=0.999683;RPB=0.676893;SGB=74.528;VDB=0.349544;EFF=INTERGENIC(MODIFIER||||||||||1) FN4136-S.SNP.5:25758700 chr05:025758700 0 W/25758700-25758700 FN4136-S SNP G -> T AC=1;AN=170;BQB=0.984023;DP=2647;DP4=1240,1316,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.34356e-12;MQSB=0.999211;RPB=0.763061;SGB=78.9707;VDB=0.253296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.5:25766410 chr05:025766410 0 W/25766410-25766410 FN3949-S SNP T -> C AC=2;AN=168;BQB=0.887875;DP=2677;DP4=1074,1452,7,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.32419e-10;MQSB=0.992009;RPB=0.768557;SGB=34.3388;VDB=0.553828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.5:25785560 chr05:025785560 0 W/25785560-25785560 FN2349 SNP A -> C AC=1;AN=192;BQB=0.976049;DP=5007;DP4=2441,2331,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000399441;MQB=3.99745e-10;MQSB=0.918345;RPB=0.31478;SGB=85.7252;VDB=0.227152;EFF=INTRON(MODIFIER||||743|LOC_Os05g44310|protein_coding|CODING|LOC_Os05g44310.1|9|1) FN-112.SNP.5:25793312 chr05:025793312 0 W/25793312-25793312 FN-112 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g44320 WD domain, G-beta repeat domain containing protein, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN3820-S.SNP.5:25794923 chr05:025794923 0 W/25794923-25794923 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.66361;DP=2868;DP4=1521,1256,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51957e-06;MQSB=0.941784;RPB=0.758844;SGB=28.9929;VDB=0.870636;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.5:25797375 chr05:025797375 0 W/25797375-25797375 FN266-S Single Base Substitution G-A INTRON HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3295-S.SNP.5:25804388 chr05:025804388 0 W/25804388-25804388 FN3295-S SNP C -> A AC=1;AN=184;BQB=0.833142;DP=3898;DP4=1435,2332,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.4604e-06;MQSB=0.976189;RPB=0.999977;SGB=0.715177;VDB=0.817437;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E772*|912|LOC_Os05g44340|protein_coding|CODING|LOC_Os05g44340.1|4|1);LOF=(LOC_Os05g44340|LOC_Os05g44340|1|1.00);NMD=(LOC_Os05g44340|LOC_Os05g44340|1|1.00) FN856-S.SNP.5:25804837 chr05:025804837 0 W/25804837-25804837 FN856-S Single Base Substitution A-T INTRON HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2364.SNP.5:25809143 chr05:025809143 0 W/25809143-25809143 FN2364 SNP A -> T AC=1;AN=192;BQB=0.229667;DP=5210;DP4=2508,2424,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.24486e-07;MQSB=0.823556;RPB=0.667359;SGB=16.0922;VDB=0.473679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K121N|317|LOC_Os05g44350|protein_coding|CODING|LOC_Os05g44350.1|4|1) FN3450-S.SNP.5:25817669 chr05:025817669 0 W/25817669-25817669 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.975021;DP=3076;DP4=1478,1511,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.89953e-09;MQSB=0.992604;RPB=0.407974;SGB=39.2697;VDB=0.585335;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.5:25818940 chr05:025818940 0 W/25818940-25818940 FN1356-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN566-S.SNP.5:25827258 chr05:025827258 0 W/25827258-25827258 FN566-S Single Base Substitution G-T INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2386.SNP.5:25827611 chr05:025827611 0 W/25827611-25827611 FN2386 SNP C -> T AC=1;AN=192;BQB=0.962793;DP=4814;DP4=2054,2555,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.47483e-16;MQSB=0.977575;RPB=0.984982;SGB=-40.9913;VDB=0.958547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.5:25832335 chr05:025832335 0 W/25832335-25832335 FN2126-S SNP A -> G AC=1;AN=168;BQB=0.496118;DP=3418;DP4=1564,1816,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97618e-12;MQSB=0.86455;RPB=0.999589;SGB=-12.3568;VDB=0.445896;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.5:25836778 chr05:025836778 0 W/25836778-25836778 FN1068-S Single Base Substitution G-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2459.SNP.5:25839727 chr05:025839727 0 W/25839727-25839727 FN2459 SNP T -> A AC=2;AN=200;BQB=1;DP=4534;DP4=2095,2070,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29888e-25;MQSB=0.186986;RPB=0.987902;SGB=94.6142;VDB=0.970939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.5:25845804 chr05:025845804 0 W/25845804-25845804 FN2768-S SNP T -> C AC=1;AN=198;BQB=0.986588;DP=4122;DP4=2042,1742,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.55901e-13;MQSB=0.948333;RPB=0.957648;SGB=-39.8795;VDB=0.662228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.5:25856322 chr05:025856322 0 W/25856322-25856322 FN1250-S Single Base Substitution C-T INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1320-S.SNP.5:25857621 chr05:025857621 0 W/25857621-25857621 FN1320-S Single Base Substitution A-T INTRON HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2091-S.SNP.5:25863315 chr05:025863315 0 W/25863315-25863315 FN2091-S SNP G -> T AC=1;AN=168;BQB=0.997315;DP=2913;DP4=1603,1276,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=16;MQ0F=0.420872;MQB=0.283943;MQSB=0;RPB=0.509872;SGB=14.2064;VDB=0.7983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.5:25866714 chr05:025866714 0 W/25866714-25866714 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.856238;DP=2320;DP4=1004,1217,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.105603;MQB=0.336927;MQSB=2.97764e-05;RPB=0.758217;SGB=53.3568;VDB=0.718984;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.5:25870077 chr05:025870077 0 W/25870077-25870077 FN920-S Single Base Substitution T-A INTERGENIC HOMO SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN2231-S.SNP.5:25876862 chr05:025876862 0 W/25876862-25876862 FN2231-S SNP T -> C AC=2;AN=190;BQB=0.153749;DP=4911;DP4=2042,2224,33,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.20214e-28;MQSB=0.681611;RPB=0.99759;SGB=-53.2771;VDB=0.0568571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.5:25877289 chr05:025877289 0 W/25877289-25877289 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1282-S.SNP.5:25878251 chr05:025878251 0 W/25878251-25878251 FN1282-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g44460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN4046-S.SNP.5:25886855 chr05:025886855 0 W/25886855-25886855 FN4046-S SNP A -> T AC=1;AN=168;BQB=0.66814;DP=3015;DP4=1414,1421,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0145937;MQB=0.0256883;MQSB=0.0224911;RPB=0.240199;SGB=34.748;VDB=0.196599;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.5:25904350 chr05:025904350 0 W/25904350-25904350 FN2709-S SNP A -> G AC=1;AN=200;BQB=0.184854;DP=4880;DP4=2392,2278,8,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00122951;MQB=2.84713e-07;MQSB=8.30652e-05;RPB=0.848472;SGB=32.0901;VDB=0.498572;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.5:25907869 chr05:025907869 0 W/25907869-25907869 FN343-S Single Base Substitution G-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2581-S.SNP.5:25911848 chr05:025911848 0 W/25911848-25911848 FN2581-S SNP A -> C AC=1;AN=198;BQB=0.0245387;DP=4050;DP4=2025,1804,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.79094e-07;MQSB=0.96092;RPB=0.999702;SGB=-85.8206;VDB=0.0408632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttC|L303F|316|LOC_Os05g44540|protein_coding|CODING|LOC_Os05g44540.1|2|1) FN971-S.SNP.5:25919688 chr05:025919688 0 W/25919688-25919688 FN971-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g44560 kinesin motor domain containing protein, expressed SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-123.SNP.5:25921256 chr05:025921256 0 W/25921256-25921256 FN-123 Single Base Substitution A-G INTRON HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3987-S.SNP.5:25925887 chr05:025925887 0 W/25925887-25925887 FN3987-S SNP G -> A AC=2;AN=168;BQB=0.959434;DP=2651;DP4=1539,932,21,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.88064e-13;MQSB=0.986935;RPB=0.99365;SGB=63.5086;VDB=0.186588;EFF=UTR_5_PRIME(MODIFIER||35||967|LOC_Os05g44560|protein_coding|CODING|LOC_Os05g44560.1|1|1) FN2705-S.SNP.5:25927547 chr05:025927547 0 W/25927547-25927547 FN2705-S SNP C -> T AC=1;AN=200;BQB=0.390342;DP=4897;DP4=2056,2541,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11573e-06;MQSB=0.785384;RPB=0.444469;SGB=54.2646;VDB=0.187196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-359.SNP.5:25934281 chr05:025934281 0 W/25934281-25934281 FN-359 Single Base Substitution T-C INTRON HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1228-S.SNP.5:25937118 chr05:025937118 0 W/25937118-25937118 FN1228-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3294-S.SNP.5:25940094 chr05:025940094 0 W/25940094-25940094 FN3294-S SNP T -> C AC=1;AN=184;BQB=0.77671;DP=2968;DP4=1517,1354,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13339e-07;MQSB=0.947018;RPB=0.243708;SGB=18.2315;VDB=0.903497;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.5:25964129 chr05:025964129 0 W/25964129-25964129 FN2112-S SNP G -> C AC=1;AN=168;BQB=0.115443;DP=3646;DP4=1487,2112,12,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.26003e-13;MQSB=0.568694;RPB=0.697183;SGB=25.6529;VDB=0.714296;EFF=INTRON(MODIFIER||||363|LOC_Os05g44630|protein_coding|CODING|LOC_Os05g44630.1|1|1) FN2558-S.SNP.5:25970885 chr05:025970885 0 W/25970885-25970885 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.187018;DP=3908;DP4=1364,2287,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.40209e-06;MQSB=0.290895;RPB=0.954828;SGB=40.149;VDB=0.453798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.5:25974997 chr05:025974997 0 W/25974997-25974997 FN3976-S SNP T -> A AC=1;AN=168;BQB=0.833526;DP=3326;DP4=1552,1624,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000300661;MQB=1.79173e-06;MQSB=0.0805935;RPB=0.971585;SGB=27.8864;VDB=0.274778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I436N|476|LOC_Os05g44660|protein_coding|CODING|LOC_Os05g44660.1|4|1) FN2178-S.SNP.5:25975929 chr05:025975929 0 W/25975929-25975929 FN2178-S SNP A -> T AC=1;AN=168;BQB=0.289858;DP=3716;DP4=1777,1903,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0115716;MQB=0.0544085;MQSB=0.0111064;RPB=0.987167;SGB=14.2064;VDB=0.719977;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.5:25978934 chr05:025978934 0 W/25978934-25978934 FN4165-S SNP G -> C AC=1;AN=170;BQB=0.974764;DP=3741;DP4=1477,2162,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=10;MQ0F=0.616947;MQB=0.00835813;MQSB=0;RPB=0.346444;SGB=52.3148;VDB=0.437876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.5:26010938 chr05:026010938 0 W/26010938-26010938 FN1646-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g44740 transposon protein, putative, unclassified, expressed SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN989-S.SNP.5:26013541 chr05:026013541 0 W/26013541-26013541 FN989-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g44740 transposon protein, putative, unclassified, expressed SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN814-S.SNP.5:26014544 chr05:026014544 0 W/26014544-26014544 FN814-S Single Base Substitution G-A INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN814-S.SNP.5:26014545 chr05:026014545 0 W/26014545-26014545 FN814-S Single Base Substitution C-T INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN849-S.SNP.5:26015142 chr05:026015142 0 W/26015142-26015142 FN849-S Single Base Substitution C-A INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN462-S.SNP.5:26018106 chr05:026018106 0 W/26018106-26018106 FN462-S Single Base Substitution G-A INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3488-S.SNP.5:26021126 chr05:026021126 0 W/26021126-26021126 FN3488-S SNP T -> C AC=1;AN=184;BQB=0.989814;DP=2661;DP4=1291,1295,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75981e-08;MQSB=0.712954;RPB=0.63029;SGB=62.3078;VDB=0.531411;EFF=INTRON(MODIFIER||||507|LOC_Os05g44760|protein_coding|CODING|LOC_Os05g44760.1|7|1) FN3911-S.SNP.5:26047312 chr05:026047312 0 W/26047312-26047312 FN3911-S SNP G -> A AC=1;AN=158;BQB=0.992893;DP=2568;DP4=1264,1132,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=6.59402e-07;MQSB=0.00156678;RPB=0.784418;SGB=21.4493;VDB=0.623724;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q367*|1198|LOC_Os05g44792|protein_coding|CODING|LOC_Os05g44792.1|3|1),SPLICE_SITE_REGION(LOW||||1198|LOC_Os05g44792|protein_coding|CODING|LOC_Os05g44792.1|3|1);LOF=(LOC_Os05g44792|LOC_Os05g44792|1|1.00);NMD=(LOC_Os05g44792|LOC_Os05g44792|1|1.00) FN3535-S.SNP.5:26049157 chr05:026049157 0 W/26049157-26049157 FN3535-S SNP C -> G AC=1;AN=188;BQB=0.946246;DP=3802;DP4=1419,2305,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00118866;MQSB=1.70152e-18;RPB=0.949455;SGB=30.8063;VDB=0.355727;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G64R|1198|LOC_Os05g44792|protein_coding|CODING|LOC_Os05g44792.1|2|1) FN2680-S.SNP.5:26062621 chr05:026062621 0 W/26062621-26062621 FN2680-S SNP T -> A AC=2;AN=200;BQB=0.866796;DP=4121;DP4=1968,1826,33,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.16847e-30;MQSB=0.338897;RPB=0.235316;SGB=118.32;VDB=0.0209102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.5:26062622 chr05:026062622 0 W/26062622-26062622 FN3832-S SNP A -> T AC=1;AN=190;BQB=0.667212;DP=1792;DP4=789,850,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.76205e-05;MQSB=0.278;RPB=0.402249;SGB=39.9877;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.5:26064374 chr05:026064374 0 W/26064374-26064374 FN1015-S Single Base Substitution C-A INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3547-S.SNP.5:26071729 chr05:026071729 0 W/26071729-26071729 FN3547-S SNP G -> A AC=1;AN=188;BQB=0.94399;DP=2770;DP4=1347,1357,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000361011;MQB=2.38127e-11;MQSB=0.878586;RPB=0.657032;SGB=57.244;VDB=0.486867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.5:26074346 chr05:026074346 0 W/26074346-26074346 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.821728;DP=4105;DP4=2113,1744,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000243605;MQB=4.60852e-07;MQSB=0.00853639;RPB=0.95002;SGB=29.4849;VDB=0.0511136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.5:26088344 chr05:026088344 0 W/26088344-26088344 FN2337 SNP C -> T AC=1;AN=192;BQB=0.829017;DP=4679;DP4=2170,2203,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00341953;MQB=2.96978e-05;MQSB=0.0333517;RPB=0.436044;SGB=76.5965;VDB=0.0398861;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A508|1080|LOC_Os05g44890|protein_coding|CODING|LOC_Os05g44890.1|2|1) FN1467-S.SNP.5:26093717 chr05:026093717 0 W/26093717-26093717 FN1467-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2197-S.SNP.5:26094364 chr05:026094364 0 W/26094364-26094364 FN2197-S SNP A -> C AC=1;AN=190;BQB=0.618953;DP=4869;DP4=2431,2010,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06377e-08;MQSB=0.978362;RPB=0.950157;SGB=21.1058;VDB=0.735282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.5:26096456 chr05:026096456 0 W/26096456-26096456 FN3880-S SNP G -> A AC=2;AN=158;BQB=0.640402;DP=2553;DP4=1279,1152,14,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.29076e-11;MQSB=0.990973;RPB=0.682916;SGB=108.239;VDB=0.795323;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T334I|377|LOC_Os05g44910|protein_coding|CODING|LOC_Os05g44910.1|6|1) FN2758-S.SNP.5:26096812 chr05:026096812 0 W/26096812-26096812 FN2758-S SNP T -> A AC=1;AN=200;BQB=0.92461;DP=5242;DP4=2442,2570,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95566e-12;MQSB=0.991675;RPB=0.442399;SGB=58.2954;VDB=0.104117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K215N|377|LOC_Os05g44910|protein_coding|CODING|LOC_Os05g44910.1|6|1) FN961-S.SNP.5:26112024 chr05:026112024 0 W/26112024-26112024 FN961-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3549-S.SNP.5:26113715 chr05:026113715 0 W/26113715-26113715 FN3549-S SNP G -> C AC=1;AN=188;BQB=0.930806;DP=3228;DP4=1561,1601,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.51211e-07;MQSB=0.986012;RPB=0.522526;SGB=39.8925;VDB=0.227032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D98H|947|LOC_Os05g44930|protein_coding|CODING|LOC_Os05g44930.1|2|1) FN3549-S.SNP.5:26113716 chr05:026113716 0 W/26113716-26113716 FN3549-S SNP A -> C AC=1;AN=188;BQB=0.804201;DP=3219;DP4=1533,1562,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06189e-07;MQSB=0.996063;RPB=0.319503;SGB=28.8977;VDB=0.154016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D98A|947|LOC_Os05g44930|protein_coding|CODING|LOC_Os05g44930.1|2|1) FN-219.SNP.5:26114819 chr05:026114819 0 W/26114819-26114819 FN-219 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g44930 receptor-like protein kinase, putative, expressed SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1292-S.SNP.5:26117153 chr05:026117153 0 W/26117153-26117153 FN1292-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os05g44930 receptor-like protein kinase, putative, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3698-S.SNP.5:26117671 chr05:026117671 0 W/26117671-26117671 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.912051;DP=3023;DP4=1396,1534,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.55707e-09;MQSB=0.999584;RPB=0.881808;SGB=71.8647;VDB=0.311165;EFF=UTR_3_PRIME(MODIFIER||75||947|LOC_Os05g44930|protein_coding|CODING|LOC_Os05g44930.1|13|1) FN2698-S.SNP.5:26122917 chr05:026122917 0 W/26122917-26122917 FN2698-S SNP A -> T AC=1;AN=200;BQB=0.876995;DP=5394;DP4=2445,2702,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185391;MQB=8.42073e-14;MQSB=0.956051;RPB=0.743159;SGB=39.9056;VDB=0.721399;EFF=INTRON(MODIFIER||||965|LOC_Os05g44940|protein_coding|CODING|LOC_Os05g44940.1|4|1) FN2698-S.SNP.5:26122918 chr05:026122918 0 W/26122918-26122918 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.952672;DP=5389;DP4=2370,2713,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185563;MQB=7.02971e-14;MQSB=0.983949;RPB=0.508498;SGB=17.5158;VDB=0.83723;EFF=INTRON(MODIFIER||||965|LOC_Os05g44940|protein_coding|CODING|LOC_Os05g44940.1|4|1) FN2467.SNP.5:26124415 chr05:026124415 0 W/26124415-26124415 FN2467 SNP C -> T AC=1;AN=200;BQB=0.0367913;DP=4378;DP4=1900,2182,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83427e-07;MQSB=0.540455;RPB=0.716351;SGB=49.6594;VDB=0.44694;EFF=INTRON(MODIFIER||||965|LOC_Os05g44940|protein_coding|CODING|LOC_Os05g44940.1|7|1) FN1093-S.SNP.5:26136473 chr05:026136473 0 W/26136473-26136473 FN1093-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g44960 expressed protein SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2431.SNP.5:26137852 chr05:026137852 0 W/26137852-26137852 FN2431 SNP C -> T AC=2;AN=200;BQB=0.983749;DP=4678;DP4=2212,2199,12,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.52863e-16;MQSB=0.977535;RPB=0.928436;SGB=94.3471;VDB=0.234365;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q385*|701|LOC_Os05g44960|protein_coding|CODING|LOC_Os05g44960.1|6|1);LOF=(LOC_Os05g44960|LOC_Os05g44960|1|1.00);NMD=(LOC_Os05g44960|LOC_Os05g44960|1|1.00) FN4040-S.SNP.5:26137852 chr05:026137852 0 W/26137852-26137852 FN4040-S SNP C -> T AC=2;AN=168;BQB=0.934135;DP=2687;DP4=1259,1348,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.25754e-14;MQSB=0.999948;RPB=0.556133;SGB=72.4869;VDB=0.851686;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q385*|701|LOC_Os05g44960|protein_coding|CODING|LOC_Os05g44960.1|6|1);LOF=(LOC_Os05g44960|LOC_Os05g44960|1|1.00);NMD=(LOC_Os05g44960|LOC_Os05g44960|1|1.00) FN471-S.SNP.5:26137852 chr05:026137852 0 W/26137852-26137852 FN471-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os05g44960 expressed protein SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN466-S.SNP.5:26141798 chr05:026141798 0 W/26141798-26141798 FN466-S Single Base Substitution T-C INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-67.SNP.5:26142329 chr05:026142329 0 W/26142329-26142329 FN-67 Single Base Substitution C-A INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2214-S.SNP.5:26153090 chr05:026153090 0 W/26153090-26153090 FN2214-S SNP T -> C AC=1;AN=190;BQB=0.92469;DP=4822;DP4=2108,2423,16,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31033e-15;MQSB=0.998854;RPB=0.206321;SGB=64.5217;VDB=0.436426;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.5:26162795 chr05:026162795 0 W/26162795-26162795 FN1079-S Single Base Substitution T-C INTERGENIC HOMO SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN4136-S.SNP.5:26168449 chr05:026168449 0 W/26168449-26168449 FN4136-S SNP T -> C AC=1;AN=170;BQB=0.989511;DP=2681;DP4=1420,1173,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.85299e-08;MQSB=0.930223;RPB=0.0948188;SGB=31.4354;VDB=0.0188978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.5:26168702 chr05:026168702 0 W/26168702-26168702 FN2288 SNP C -> A AC=1;AN=192;BQB=0.809549;DP=5161;DP4=2548,2383,5,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.54062e-12;MQSB=0.97201;RPB=0.391033;SGB=57.6018;VDB=0.285637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.5:26174777 chr05:026174777 0 W/26174777-26174777 FN1614-S Single Base Substitution G-A INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2668-S.SNP.5:26181041 chr05:026181041 0 W/26181041-26181041 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.97316;DP=4861;DP4=2453,2172,15,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.73948e-18;MQSB=0.895838;RPB=0.931056;SGB=65.9573;VDB=0.124591;EFF=INTRON(MODIFIER||||251|LOC_Os05g45050|protein_coding|CODING|LOC_Os05g45050.1|2|1),INTRON(MODIFIER||||224|LOC_Os05g45050|protein_coding|CODING|LOC_Os05g45050.2|2|1) FN2280-S.SNP.5:26198713 chr05:026198713 0 W/26198713-26198713 FN2280-S SNP G -> T AC=1;AN=190;BQB=0.225639;DP=4198;DP4=1564,2167,8,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58208e-08;MQSB=2.01369e-07;RPB=0.888835;SGB=-9.89872;VDB=0.985555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L419M|472|LOC_Os05g45100|protein_coding|CODING|LOC_Os05g45100.1|1|1) FN244-S.SNP.5:26198853 chr05:026198853 0 W/26198853-26198853 FN244-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g45100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4176-S.SNP.5:26204139 chr05:026204139 0 W/26204139-26204139 FN4176-S SNP T -> A AC=2;AN=170;BQB=0.541933;DP=2362;DP4=892,1410,6,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.26194e-09;MQSB=0.991333;RPB=0.792723;SGB=96.7413;VDB=0.0914648;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.5:26204153 chr05:026204153 0 W/26204153-26204153 FN543-S Single Base Substitution A-G INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2574-S.SNP.5:26206227 chr05:026206227 0 W/26206227-26206227 FN2574-S SNP C -> T AC=2;AN=198;BQB=0.998949;DP=3815;DP4=1853,1784,11,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.83553e-10;MQSB=0.814089;RPB=0.999826;SGB=67.9293;VDB=0.975996;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W71*|94|LOC_Os05g45120|protein_coding|CODING|LOC_Os05g45120.1|1|1) FN3928-S.SNP.5:26206519 chr05:026206519 0 W/26206519-26206519 FN3928-S SNP G -> A AC=1;AN=158;BQB=0.942284;DP=2686;DP4=1361,1226,11,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.49378e-13;MQSB=0.901152;RPB=0.674478;SGB=45.1437;VDB=0.163288;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.5:26212372 chr05:026212372 0 W/26212372-26212372 FN4044-S SNP G -> T AC=2;AN=168;BQB=0.86256;DP=2360;DP4=984,1279,8,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.34934e-10;MQSB=0.974595;RPB=0.880467;SGB=69.8961;VDB=0.63687;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P18|273|LOC_Os05g45140|protein_coding|CODING|LOC_Os05g45140.1|1|1) FN1076-S.SNP.5:26215187 chr05:026215187 0 W/26215187-26215187 FN1076-S Single Base Substitution C-T INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2080-S.SNP.5:26216254 chr05:026216254 0 W/26216254-26216254 FN2080-S SNP T -> C AC=1;AN=168;BQB=0.0448343;DP=3196;DP4=1901,1261,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.82953e-07;MQSB=0.850842;RPB=0.436459;SGB=5.62151;VDB=0.514804;EFF=INTRON(MODIFIER||||440|LOC_Os05g45150|protein_coding|CODING|LOC_Os05g45150.1|2|1) FN1450-S.SNP.5:26224237 chr05:026224237 0 W/26224237-26224237 FN1450-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os05g45170 glucosyl transferase, putative, expressed SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN4082-S.SNP.5:26229503 chr05:026229503 0 W/26229503-26229503 FN4082-S SNP T -> A AC=1;AN=182;BQB=0.999428;DP=2723;DP4=1331,1300,10,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.698e-15;MQSB=0.469804;RPB=0.933768;SGB=74.2472;VDB=0.0319347;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.5:26229666 chr05:026229666 0 W/26229666-26229666 W42-1-3S-1 Single Base Substitution A-T INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-236.SNP.5:26234872 chr05:026234872 0 W/26234872-26234872 FN-236 Single Base Substitution A-T INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-236.SNP.5:26234874 chr05:026234874 0 W/26234874-26234874 FN-236 Single Base Substitution A-G INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1023-S.SNP.5:26236862 chr05:026236862 0 W/26236862-26236862 FN1023-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g45200 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1414-S.SNP.5:26238156 chr05:026238156 0 W/26238156-26238156 FN1414-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN501-S.SNP.5:26240465 chr05:026240465 0 W/26240465-26240465 FN501-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g45210 respiratory burst oxidase, putative, expressed SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN-91.SNP.5:26240783 chr05:026240783 0 W/26240783-26240783 FN-91 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g45210 respiratory burst oxidase, putative, expressed SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN-91.SNP.5:26240786 chr05:026240786 0 W/26240786-26240786 FN-91 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g45210 respiratory burst oxidase, putative, expressed SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN3837-S.SNP.5:26243423 chr05:026243423 0 W/26243423-26243423 FN3837-S SNP A -> T AC=1;AN=190;BQB=0.986819;DP=2768;DP4=1274,1435,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27446e-11;MQSB=0.998279;RPB=0.795635;SGB=71.8647;VDB=0.273288;EFF=INTRON(MODIFIER||||951|LOC_Os05g45210|protein_coding|CODING|LOC_Os05g45210.1|4|1),INTRON(MODIFIER||||951|LOC_Os05g45210|protein_coding|CODING|LOC_Os05g45210.2|4|1),INTRON(MODIFIER||||951|LOC_Os05g45210|protein_coding|CODING|LOC_Os05g45210.3|4|1) FN-246.SNP.5:26248921 chr05:026248921 0 W/26248921-26248921 FN-246 Single Base Substitution A-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3549-S.SNP.5:26249467 chr05:026249467 0 W/26249467-26249467 FN3549-S SNP A -> C AC=1;AN=188;BQB=0.414254;DP=3008;DP4=1479,1289,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3163e-05;MQSB=0.990728;RPB=0.965575;SGB=-2.17824;VDB=0.884455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.5:26270538 chr05:026270538 0 W/26270538-26270538 FN3390-S SNP C -> T AC=1;AN=184;BQB=0.429662;DP=3987;DP4=2200,1674,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.44279e-09;MQSB=0.939;RPB=0.639168;SGB=33.3622;VDB=0.474067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.5:26290121 chr05:026290121 0 W/26290121-26290121 FN1630-S Single Base Substitution A-C INTRON Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2730-S.SNP.5:26297219 chr05:026297219 0 W/26297219-26297219 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.892555;DP=4601;DP4=2429,1943,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0131e-11;MQSB=0.909402;RPB=0.735868;SGB=34.6953;VDB=0.935167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.5:26312983 chr05:026312983 0 W/26312983-26312983 FN3700-S SNP G -> T AC=1;AN=190;BQB=0.992396;DP=3061;DP4=1450,1501,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46113e-11;MQSB=0.989403;RPB=0.851556;SGB=76.4186;VDB=0.113185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S202R|350|LOC_Os05g45350|protein_coding|CODING|LOC_Os05g45350.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S202R|342|LOC_Os05g45350|protein_coding|CODING|LOC_Os05g45350.2|4|1|WARNING_TRANSCRIPT_INCOMPLETE),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S202R|279|LOC_Os05g45350|protein_coding|CODING|LOC_Os05g45350.3|4|1) FN3445-S.SNP.5:26315159 chr05:026315159 0 W/26315159-26315159 FN3445-S SNP A -> G AC=1;AN=184;BQB=0.994698;DP=3454;DP4=1688,1642,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.73074e-09;MQSB=0.990571;RPB=0.961725;SGB=66.8296;VDB=0.340089;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.5:26321117 chr05:026321117 0 W/26321117-26321117 FN1717-S SNP G -> A AC=1;AN=188;BQB=0.826432;DP=3057;DP4=1785,1229,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16537e-10;MQSB=0.996438;RPB=0.538338;SGB=-38.278;VDB=0.323957;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.5:26324331 chr05:026324331 0 W/26324331-26324331 FN500-S Single Base Substitution T-A INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN932-S.SNP.5:26324460 chr05:026324460 0 W/26324460-26324460 FN932-S Single Base Substitution T-A INTRON HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN1566-S.SNP.5:26328177 chr05:026328177 0 W/26328177-26328177 FN1566-S Single Base Substitution C-T INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3570-S.SNP.5:26328883 chr05:026328883 0 W/26328883-26328883 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.748862;DP=2270;DP4=837,1281,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00244098;MQSB=0.99832;RPB=0.697679;SGB=18.3316;VDB=0.614988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R89W|101|LOC_Os05g45380|protein_coding|CODING|LOC_Os05g45380.1|1|1) FN-93.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN-93 Single Base Substitution T-C INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2753-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN2753-S SNP T -> C AC=2;AN=200;BQB=0.977924;DP=4996;DP4=2383,2375,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.36934e-20;MQSB=0.797976;RPB=0.398114;SGB=0.808681;VDB=0.0819219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN2767-S SNP T -> C AC=1;AN=198;BQB=0.72103;DP=4272;DP4=2042,1979,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.90939e-11;MQSB=0.844366;RPB=0.581274;SGB=72.5245;VDB=0.0373242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN3287-S SNP T -> C AC=1;AN=184;BQB=0.976531;DP=2888;DP4=1377,1408,13,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00034626;MQB=4.55264e-09;MQSB=0.922685;RPB=0.642523;SGB=66.8296;VDB=0.992643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN3472-S SNP T -> C AC=2;AN=184;BQB=0.935941;DP=2684;DP4=1283,1318,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.15794e-21;MQSB=0.983309;RPB=0.866541;SGB=152.744;VDB=0.299948;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN4147-S SNP T -> C AC=2;AN=170;BQB=0.975387;DP=2575;DP4=1286,1225,7,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.10094e-09;MQSB=0.965021;RPB=0.837599;SGB=65.6427;VDB=0.259298;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN729-S Single Base Substitution T-C INTERGENIC HOMO SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN781-S.SNP.5:26333603 chr05:026333603 0 W/26333603-26333603 FN781-S Single Base Substitution T-C INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2202-S.SNP.5:26337621 chr05:026337621 0 W/26337621-26337621 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.447839;DP=4416;DP4=2589,1603,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72729e-08;MQSB=0.245901;RPB=0.731297;SGB=39.6545;VDB=0.205706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.5:26342962 chr05:026342962 0 W/26342962-26342962 FN-336 Single Base Substitution A-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN934-S.SNP.5:26343482 chr05:026343482 0 W/26343482-26343482 FN934-S Single Base Substitution G-C INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2729-S.SNP.5:26344327 chr05:026344327 0 W/26344327-26344327 FN2729-S SNP A -> C AC=1;AN=200;BQB=0.00229395;DP=4997;DP4=2388,2170,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97932e-08;MQSB=0.971982;RPB=0.319762;SGB=-38.4742;VDB=0.631315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.5:26356623 chr05:026356623 0 W/26356623-26356623 FN1490-S Single Base Substitution C-A INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN519-S.SNP.5:26364523 chr05:026364523 0 W/26364523-26364523 FN519-S Single Base Substitution G-T INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN464-S.SNP.5:26368039 chr05:026368039 0 W/26368039-26368039 FN464-S Single Base Substitution T-A INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN-368.SNP.5:26369328 chr05:026369328 0 W/26369328-26369328 FN-368 Single Base Substitution A-T INTERGENIC HOMO SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN1020-S.SNP.5:26369328 chr05:026369328 0 W/26369328-26369328 FN1020-S Single Base Substitution A-T INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2420.SNP.5:26369328 chr05:026369328 0 W/26369328-26369328 FN2420 SNP A -> T AC=1;AN=200;BQB=0.970031;DP=4852;DP4=2213,2378,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.90739e-12;MQSB=0.879518;RPB=0.974965;SGB=47.7211;VDB=0.124686;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.5:26376512 chr05:026376512 0 W/26376512-26376512 FN-246 Single Base Substitution G-A INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN914-S.SNP.5:26386722 chr05:026386722 0 W/26386722-26386722 FN914-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2491.SNP.5:26395164 chr05:026395164 0 W/26395164-26395164 FN2491 SNP C -> T AC=2;AN=200;BQB=0.412428;DP=3725;DP4=1785,1736,12,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.58874e-12;MQSB=0.0015403;RPB=0.804039;SGB=127.947;VDB=0.749671;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V40|269|LOC_Os05g45530|protein_coding|CODING|LOC_Os05g45530.1|1|1) FN1326-S.SNP.5:26400503 chr05:026400503 0 W/26400503-26400503 FN1326-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g45550 retrotransposon protein, putative, unclassified, expressed SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1215-S.SNP.5:26403412 chr05:026403412 0 W/26403412-26403412 FN1215-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN503-S.SNP.5:26406050 chr05:026406050 0 W/26406050-26406050 FN503-S Single Base Substitution G-A INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN3484-S.SNP.5:26413627 chr05:026413627 0 W/26413627-26413627 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.895361;DP=2749;DP4=1193,1411,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.71118e-07;MQSB=0.995224;RPB=0.953267;SGB=25.1826;VDB=0.125735;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.5:26417080 chr05:026417080 0 W/26417080-26417080 FN739-S Single Base Substitution C-G INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1689-S.SNP.5:26427888 chr05:026427888 0 W/26427888-26427888 FN1689-S SNP A -> G AC=1;AN=188;BQB=0.233177;DP=4202;DP4=2202,1967,21,3;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.367682;MQB=0.00314138;MQSB=0;RPB=0.45444;SGB=46.4225;VDB=0.762296;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.5:26428114 chr05:026428114 0 W/26428114-26428114 FN559-S Single Base Substitution T-C INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2330.SNP.5:26439991 chr05:026439991 0 W/26439991-26439991 FN2330 SNP G -> A AC=1;AN=192;BQB=0.682826;DP=4779;DP4=2483,2018,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00878845;MQB=0.00734134;MQSB=0.0163402;RPB=0.596527;SGB=46.9087;VDB=0.667349;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A577|1488|LOC_Os05g45620|protein_coding|CODING|LOC_Os05g45620.1|1|1) FN4147-S.SNP.5:26440677 chr05:026440677 0 W/26440677-26440677 FN4147-S SNP A -> G AC=1;AN=170;BQB=0.997277;DP=2586;DP4=1123,1369,2,10;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00889404;MQB=0.074711;MQSB=0.590637;RPB=0.92654;SGB=47.8722;VDB=0.70085;EFF=INTRON(MODIFIER||||1488|LOC_Os05g45620|protein_coding|CODING|LOC_Os05g45620.1|1|1) FN3552-S.SNP.5:26441617 chr05:026441617 0 W/26441617-26441617 FN3552-S SNP G -> A AC=1;AN=188;BQB=0.840549;DP=3980;DP4=2319,1595,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.32911e-06;MQSB=0.00107765;RPB=0.990558;SGB=62.6088;VDB=0.877136;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T1095|1488|LOC_Os05g45620|protein_coding|CODING|LOC_Os05g45620.1|2|1) FN_786-4-1.SNP.5:26442679 chr05:026442679 0 W/26442679-26442679 FN_786-4-1 Single Base Substitution G-C Homo LOC_Os05g45620 retrotransposon protein, putative, unclassified, expressed SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. CW-631-3-1.SNP.5:26447541 chr05:026447541 0 W/26447541-26447541 CW-631-3-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g45630 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN4133-S.SNP.5:26447745 chr05:026447745 0 W/26447745-26447745 FN4133-S SNP G -> T AC=2;AN=182;BQB=0.901956;DP=3564;DP4=1737,1763,16,9;HOB=0.0217365;ICB=0.494567;MQ=33;MQ0F=0.0771605;MQB=0.973818;MQSB=3.87045e-31;RPB=0.784526;SGB=107.263;VDB=0.206646;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q960K|1524|LOC_Os05g45630|protein_coding|CODING|LOC_Os05g45630.1|1|1) FN3460-S.SNP.5:26449405 chr05:026449405 0 W/26449405-26449405 FN3460-S SNP G -> T AC=1;AN=184;BQB=0.999669;DP=3536;DP4=1892,1538,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=18;MQ0F=0.285633;MQB=0.083445;MQSB=0;RPB=0.840605;SGB=39.2697;VDB=0.752013;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P406|1524|LOC_Os05g45630|protein_coding|CODING|LOC_Os05g45630.1|1|1) FN917-S.SNP.5:26453390 chr05:026453390 0 W/26453390-26453390 FN917-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g45640 retrotransposon protein, putative, unclassified, expressed SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3821-S.SNP.5:26456406 chr05:026456406 0 W/26456406-26456406 FN3821-S SNP C -> T AC=1;AN=190;BQB=0.910541;DP=3652;DP4=1742,1796,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00629792;MQB=0.00102918;MQSB=0.00288892;RPB=0.816985;SGB=76.4186;VDB=0.69936;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.5:26460353 chr05:026460353 0 W/26460353-26460353 FN921-S Single Base Substitution G-A INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN1258-S.SNP.5:26462003 chr05:026462003 0 W/26462003-26462003 FN1258-S Single Base Substitution G-A INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2311.SNP.5:26468612 chr05:026468612 0 W/26468612-26468612 FN2311 SNP C -> A AC=2;AN=192;BQB=0.987969;DP=4710;DP4=2159,2306,22,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000212314;MQB=3.83319e-25;MQSB=0.727225;RPB=0.791493;SGB=143.146;VDB=0.691888;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R120L|435|LOC_Os05g45670|protein_coding|CODING|LOC_Os05g45670.1|1|1) FN1622-S.SNP.5:26483046 chr05:026483046 0 W/26483046-26483046 FN1622-S Single Base Substitution G-C INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2731-S.SNP.5:26484646 chr05:026484646 0 W/26484646-26484646 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.99999;DP=5008;DP4=2250,2560,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.45362e-15;MQSB=0.963018;RPB=0.350969;SGB=45.1159;VDB=0.300362;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.5:26485266 chr05:026485266 0 W/26485266-26485266 FN2342 SNP G -> A AC=2;AN=192;BQB=0.198394;DP=4447;DP4=1953,2242,23,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.34114e-17;MQSB=0.952167;RPB=0.971375;SGB=40.2061;VDB=0.572889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.5:26485727 chr05:026485727 0 W/26485727-26485727 FN1268-S Single Base Substitution A-G INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3536-S.SNP.5:26491228 chr05:026491228 0 W/26491228-26491228 FN3536-S SNP T -> A AC=2;AN=188;BQB=0.999951;DP=2774;DP4=1531,1124,15,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.26534e-15;MQSB=0.121214;RPB=0.941507;SGB=61.6823;VDB=0.19591;EFF=UTR_3_PRIME(MODIFIER||212||723|LOC_Os05g45720|protein_coding|CODING|LOC_Os05g45720.4|12|1),UTR_3_PRIME(MODIFIER||46||774|LOC_Os05g45720|protein_coding|CODING|LOC_Os05g45720.3|12|1),INTRON(MODIFIER||||873|LOC_Os05g45720|protein_coding|CODING|LOC_Os05g45720.2|11|1),INTRON(MODIFIER||||915|LOC_Os05g45720|protein_coding|CODING|LOC_Os05g45720.1|12|1) FN2553-S.SNP.5:26497420 chr05:026497420 0 W/26497420-26497420 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.814914;DP=4487;DP4=1852,2272,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.00557e-09;MQSB=0.735805;RPB=0.970188;SGB=26.7492;VDB=0.997368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.5:26499912 chr05:026499912 0 W/26499912-26499912 FN3966-S SNP G -> A AC=2;AN=168;BQB=0.971593;DP=2581;DP4=1254,1207,19,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.30519e-19;MQSB=0.863872;RPB=0.937217;SGB=113.657;VDB=0.851324;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.5:26500796 chr05:026500796 0 W/26500796-26500796 FN869-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-199.SNP.5:26503153 chr05:026503153 0 W/26503153-26503153 FN-199 Single Base Substitution T-A INTRON HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-199.SNP.5:26503154 chr05:026503154 0 W/26503154-26503154 FN-199 Single Base Substitution A-C INTRON HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2179-S.SNP.5:26505316 chr05:026505316 0 W/26505316-26505316 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.0313018;DP=2739;DP4=1175,1509,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.64882e-08;MQSB=0.999622;RPB=0.983856;SGB=-35.5206;VDB=0.591114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A438T|640|LOC_Os05g45760|protein_coding|CODING|LOC_Os05g45760.1|1|1) FN4074-S.SNP.5:26513732 chr05:026513732 0 W/26513732-26513732 FN4074-S SNP T -> A AC=2;AN=182;BQB=0.865579;DP=3131;DP4=1436,1509,16,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.06853e-16;MQSB=0.915373;RPB=0.999975;SGB=138.839;VDB=0.345754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Agg|W111R|197|LOC_Os05g45779|protein_coding|CODING|LOC_Os05g45779.1|1|1) FN3353-S.SNP.5:26515962 chr05:026515962 0 W/26515962-26515962 FN3353-S SNP A -> T AC=1;AN=184;BQB=0.639201;DP=2829;DP4=1191,1549,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07731e-05;MQSB=0.89583;RPB=0.902798;SGB=18.2315;VDB=0.232569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.5:26526008 chr05:026526008 0 W/26526008-26526008 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.762869;DP=2861;DP4=1330,1437,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.107305;MQB=0.946089;MQSB=7.9373e-10;RPB=0.872594;SGB=71.8647;VDB=0.319721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A669T|1038|LOC_Os05g45790|protein_coding|CODING|LOC_Os05g45790.1|3|1) FN710-S.SNP.5:26530191 chr05:026530191 0 W/26530191-26530191 FN710-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g45800 retrotransposon protein, putative, unclassified, expressed SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN322-S.SNP.5:26541792 chr05:026541792 0 W/26541792-26541792 FN322-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN322-S.SNP.5:26541793 chr05:026541793 0 W/26541793-26541793 FN322-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN322-S.SNP.5:26541794 chr05:026541794 0 W/26541794-26541794 FN322-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3395-S.SNP.5:26546273 chr05:026546273 0 W/26546273-26546273 FN3395-S SNP T -> A AC=2;AN=184;BQB=0.878372;DP=2735;DP4=1187,1357,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.62024e-14;MQSB=0.971825;RPB=0.915357;SGB=95.6183;VDB=0.804542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E704D|709|LOC_Os05g45830|protein_coding|CODING|LOC_Os05g45830.1|9|1) FN1371-S.SNP.5:26551368 chr05:026551368 0 W/26551368-26551368 FN1371-S Single Base Substitution C-A INTRON HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN944-S.SNP.5:26551596 chr05:026551596 0 W/26551596-26551596 FN944-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g45830 expressed protein SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN944-S.SNP.5:26551599 chr05:026551599 0 W/26551599-26551599 FN944-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g45830 expressed protein SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2494.SNP.5:26552904 chr05:026552904 0 W/26552904-26552904 FN2494 SNP G -> A AC=2;AN=200;BQB=0.104885;DP=4350;DP4=1992,1994,17,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.40192e-19;MQSB=0.99635;RPB=0.763548;SGB=141.763;VDB=0.274127;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.5:26553470 chr05:026553470 0 W/26553470-26553470 FN-13 Single Base Substitution G-A INTERGENIC HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.5:26553470 chr05:026553470 0 W/26553470-26553470 FN-13 Single Base Substitution G-A INTERGENIC Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. W360-2S-2.SNP.5:26553793 chr05:026553793 0 W/26553793-26553793 W360-2S-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1552-S.SNP.5:26561480 chr05:026561480 0 W/26561480-26561480 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.788397;DP=2202;DP4=1375,780,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.52214e-06;MQSB=0.912732;RPB=0.49238;SGB=48.979;VDB=0.479045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C125Y|882|LOC_Os05g45850|protein_coding|CODING|LOC_Os05g45850.1|1|1) FN1742-S.SNP.5:26579716 chr05:026579716 0 W/26579716-26579716 FN1742-S SNP T -> A AC=1;AN=188;BQB=0.961138;DP=3573;DP4=1552,1977,16,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.36587e-12;MQSB=0.946294;RPB=0.619946;SGB=-73.5561;VDB=0.784729;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.5:26585827 chr05:026585827 0 W/26585827-26585827 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.768999;DP=4243;DP4=1956,2112,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.51566e-11;MQSB=0.930827;RPB=0.938317;SGB=-37.0454;VDB=0.425128;EFF=INTRON(MODIFIER||||352|LOC_Os05g45880|protein_coding|CODING|LOC_Os05g45880.1|1|1) FN2330.SNP.5:26605964 chr05:026605964 0 W/26605964-26605964 FN2330 SNP A -> G AC=1;AN=192;BQB=0.181;DP=5324;DP4=2535,2514,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.20451e-13;MQSB=0.900861;RPB=0.99829;SGB=27.6913;VDB=0.968768;EFF=INTRON(MODIFIER||||103|LOC_Os05g45910|protein_coding|CODING|LOC_Os05g45910.1|2|1) FN2307.SNP.5:26607672 chr05:026607672 0 W/26607672-26607672 FN2307 SNP T -> A AC=2;AN=192;BQB=0.850102;DP=5201;DP4=2488,2420,34,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.40181e-34;MQSB=0.853944;RPB=0.9988;SGB=263.735;VDB=0.788245;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.5:26614646 chr05:026614646 0 W/26614646-26614646 FN1423-S Single Base Substitution G-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1405-S.SNP.5:26615447 chr05:026615447 0 W/26615447-26615447 FN1405-S Single Base Substitution T-A INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1173-S.SNP.5:26625222 chr05:026625222 0 W/26625222-26625222 FN1173-S Single Base Substitution C-T INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1634-S.SNP.5:26631103 chr05:026631103 0 W/26631103-26631103 FN1634-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN-100.SNP.5:26632967 chr05:026632967 0 W/26632967-26632967 FN-100 Single Base Substitution G-A INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN-100.SNP.5:26632968 chr05:026632968 0 W/26632968-26632968 FN-100 Single Base Substitution G-A INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN1082-S.SNP.5:26640551 chr05:026640551 0 W/26640551-26640551 FN1082-S Single Base Substitution A-G INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN2446.SNP.5:26643493 chr05:026643493 0 W/26643493-26643493 FN2446 SNP T -> A AC=1;AN=200;BQB=0.989798;DP=4639;DP4=1911,2318,10,14;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0215564;MQB=0.999918;MQSB=0;RPB=0.875891;SGB=104.921;VDB=0.998822;EFF=INTRON(MODIFIER||||1684|LOC_Os05g45970|protein_coding|CODING|LOC_Os05g45970.1|5|1) FN4046-S.SNP.5:26661700 chr05:026661700 0 W/26661700-26661700 FN4046-S SNP A -> C AC=1;AN=168;BQB=0.983605;DP=2588;DP4=1137,1350,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.21902e-07;MQSB=0.942618;RPB=0.0355139;SGB=27.8864;VDB=0.262875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.5:26663033 chr05:026663033 0 W/26663033-26663033 FN-284 Single Base Substitution C-T INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN-284.SNP.5:26663034 chr05:026663034 0 W/26663034-26663034 FN-284 Single Base Substitution A-T INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN2426.SNP.5:26664587 chr05:026664587 0 W/26664587-26664587 FN2426 SNP A -> G AC=1;AN=200;BQB=0.166841;DP=4620;DP4=2382,1745,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93593e-05;MQSB=0.871003;RPB=0.457063;SGB=6.27959;VDB=0.896041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.5:26664665 chr05:026664665 0 W/26664665-26664665 FN1728-S SNP T -> C AC=1;AN=188;BQB=0.949542;DP=2442;DP4=1276,1105,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25038e-06;MQSB=0.919301;RPB=0.59483;SGB=-15.5431;VDB=0.644387;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L10P|206|LOC_Os05g46000|protein_coding|CODING|LOC_Os05g46000.1|1|1) FN3917-S.SNP.5:26666563 chr05:026666563 0 W/26666563-26666563 FN3917-S SNP C -> T AC=2;AN=158;BQB=0.832607;DP=2276;DP4=1083,1093,14,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.78488e-15;MQSB=0.898036;RPB=0.975636;SGB=130.087;VDB=0.697568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.5:26667833 chr05:026667833 0 W/26667833-26667833 FN3809-S SNP A -> G AC=1;AN=190;BQB=0.969909;DP=2530;DP4=1219,1226,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08283e-08;MQSB=0.999959;RPB=0.797425;SGB=32.5467;VDB=0.595035;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.5:26671766 chr05:026671766 0 W/26671766-26671766 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g46010 transposon protein, putative, unclassified, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1700-S.SNP.5:26676871 chr05:026676871 0 W/26676871-26676871 FN1700-S SNP T -> G AC=1;AN=188;BQB=0.252405;DP=2848;DP4=1628,1181,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.08627e-07;MQSB=0.400058;RPB=0.731813;SGB=-16.0863;VDB=0.086377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.5:26678084 chr05:026678084 0 W/26678084-26678084 FN2597-S SNP T -> A AC=1;AN=198;BQB=0.770546;DP=4208;DP4=2179,1766,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00195e-11;MQSB=0.943162;RPB=0.887445;SGB=86.3098;VDB=0.880835;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.5:26679461 chr05:026679461 0 W/26679461-26679461 FN-85 Single Base Substitution C-T INTERGENIC HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. W360-2S-2.SNP.5:26686478 chr05:026686478 0 W/26686478-26686478 W360-2S-2 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2661-S.SNP.5:26695763 chr05:026695763 0 W/26695763-26695763 FN2661-S SNP A -> G AC=1;AN=200;BQB=0.377042;DP=5059;DP4=2483,2358,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99407e-14;MQSB=0.819486;RPB=0.720371;SGB=-114.438;VDB=0.722624;EFF=INTRON(MODIFIER||||2159|LOC_Os05g46030|protein_coding|CODING|LOC_Os05g46030.1|22|1) FN1265-S.SNP.5:26696178 chr05:026696178 0 W/26696178-26696178 FN1265-S Single Base Substitution T-C INTRON HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN798-S.SNP.5:26707114 chr05:026707114 0 W/26707114-26707114 FN798-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g46040 protein phosphatase 2C, putative, expressed SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2684-S.SNP.5:26710025 chr05:026710025 0 W/26710025-26710025 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.243589;DP=4841;DP4=2147,2448,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.73839e-13;MQSB=0.901585;RPB=0.993071;SGB=95.7111;VDB=0.819538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.5:26712423 chr05:026712423 0 W/26712423-26712423 FN2444 SNP A -> T AC=1;AN=200;BQB=0.861663;DP=5016;DP4=2406,2413,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199362;MQB=6.39384e-15;MQSB=0.934023;RPB=0.993465;SGB=90.7419;VDB=0.741787;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.5:26714215 chr05:026714215 0 W/26714215-26714215 FN748-S Single Base Substitution T-C INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-55.SNP.5:26716105 chr05:026716105 0 W/26716105-26716105 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN-84.SNP.5:26717834 chr05:026717834 0 W/26717834-26717834 FN-84 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1451-S.SNP.5:26720890 chr05:026720890 0 W/26720890-26720890 FN1451-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-314.SNP.5:26730642 chr05:026730642 0 W/26730642-26730642 FN-314 Single Base Substitution G-C INTERGENIC HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1053-S.SNP.5:26732732 chr05:026732732 0 W/26732732-26732732 FN1053-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1633-S.SNP.5:26747466 chr05:026747466 0 W/26747466-26747466 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2468.SNP.5:26754197 chr05:026754197 0 W/26754197-26754197 FN2468 SNP C -> T AC=1;AN=200;BQB=0.930022;DP=4088;DP4=1983,1890,7,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0124755;MQB=0.00010031;MQSB=1.50814e-06;RPB=0.4814;SGB=51.0851;VDB=0.378289;EFF=INTRON(MODIFIER||||1702|LOC_Os05g46130|protein_coding|CODING|LOC_Os05g46130.1|2|1) FN1350-S.SNP.5:26763766 chr05:026763766 0 W/26763766-26763766 FN1350-S Single Base Substitution A-G INTRON HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN792-S.SNP.5:26765296 chr05:026765296 0 W/26765296-26765296 FN792-S Single Base Substitution A-C INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN4063-S.SNP.5:26766880 chr05:026766880 0 W/26766880-26766880 FN4063-S SNP C -> T AC=2;AN=168;BQB=0.785066;DP=2799;DP4=1237,1438,9,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.04599e-14;MQSB=0.980896;RPB=0.495338;SGB=-11.4952;VDB=0.212743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:26767344 chr05:026767344 0 W/26767344-26767344 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.995027;DP=3950;DP4=1774,1910,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.86282e-06;MQSB=0.679228;RPB=0.595766;SGB=32.5467;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.5:26767558 chr05:026767558 0 W/26767558-26767558 FN1396-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN343-S.SNP.5:26770261 chr05:026770261 0 W/26770261-26770261 FN343-S Single Base Substitution G-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN343-S.SNP.5:26770262 chr05:026770262 0 W/26770262-26770262 FN343-S Single Base Substitution G-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2440.SNP.5:26775023 chr05:026775023 0 W/26775023-26775023 FN2440 SNP A -> T AC=1;AN=200;BQB=0.514355;DP=4745;DP4=2245,2251,6,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00779768;MQB=0.00348821;MQSB=0.497375;RPB=0.861977;SGB=9.48993;VDB=0.8553;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.5:26777431 chr05:026777431 0 W/26777431-26777431 FN1472-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2555-S.SNP.5:26777808 chr05:026777808 0 W/26777808-26777808 FN2555-S SNP A -> G AC=2;AN=198;BQB=0.811779;DP=3812;DP4=1764,1684,16,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.78632e-21;MQSB=0.978012;RPB=0.799611;SGB=44.442;VDB=0.150444;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E318G|428|LOC_Os05g46170|protein_coding|CODING|LOC_Os05g46170.1|1|1) FN1062-S.SNP.5:26784993 chr05:026784993 0 W/26784993-26784993 FN1062-S Single Base Substitution T-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1062-S.SNP.5:26784994 chr05:026784994 0 W/26784994-26784994 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1327-S.SNP.5:26805522 chr05:026805522 0 W/26805522-26805522 FN1327-S Single Base Substitution A-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2188-S.SNP.5:26808545 chr05:026808545 0 W/26808545-26808545 FN2188-S SNP C -> A AC=1;AN=190;BQB=0.96921;DP=4992;DP4=2199,2446,18,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.947e-23;MQSB=0.815012;RPB=0.405507;SGB=135.609;VDB=0.746998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S314Y|341|LOC_Os05g46220|protein_coding|CODING|LOC_Os05g46220.1|2|1),UTR_3_PRIME(MODIFIER||905||364|LOC_Os05g46230|protein_coding|CODING|LOC_Os05g46230.1|11|1) FN4177-S.SNP.5:26817220 chr05:026817220 0 W/26817220-26817220 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.830127;DP=2486;DP4=1093,1327,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.97307e-06;MQSB=0.999471;RPB=0.496132;SGB=34.5445;VDB=0.0925341;EFF=UTR_5_PRIME(MODIFIER||81||233|LOC_Os05g46240|protein_coding|CODING|LOC_Os05g46240.1|2|1),UTR_5_PRIME(MODIFIER||81||233|LOC_Os05g46240|protein_coding|CODING|LOC_Os05g46240.3|3|1),UTR_5_PRIME(MODIFIER||81||233|LOC_Os05g46240|protein_coding|CODING|LOC_Os05g46240.2|2|1),UTR_5_PRIME(MODIFIER||81||233|LOC_Os05g46240|protein_coding|CODING|LOC_Os05g46240.4|3|1) FN3492-S.SNP.5:26823923 chr05:026823923 0 W/26823923-26823923 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.949508;DP=2797;DP4=1238,1464,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.40395e-11;MQSB=0.989185;RPB=0.850857;SGB=56.8786;VDB=0.54253;EFF=UTR_3_PRIME(MODIFIER||2501||161|LOC_Os05g46250|protein_coding|CODING|LOC_Os05g46250.3|4|1),UTR_3_PRIME(MODIFIER||668||261|LOC_Os05g46250|protein_coding|CODING|LOC_Os05g46250.1|4|1) FN1750-S.SNP.5:26848782 chr05:026848782 0 W/26848782-26848782 FN1750-S SNP G -> A AC=1;AN=188;BQB=0.0728076;DP=3903;DP4=2107,1749,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.17101e-10;MQSB=0.985288;RPB=0.25519;SGB=-40.5615;VDB=0.038285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.5:26860479 chr05:026860479 0 W/26860479-26860479 FN3826-S SNP A -> T AC=1;AN=190;BQB=0.638218;DP=2698;DP4=1603,1008,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.50676e-10;MQSB=0.800032;RPB=0.990828;SGB=62.7569;VDB=0.859303;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.5:26860480 chr05:026860480 0 W/26860480-26860480 FN3826-S SNP G -> T AC=1;AN=190;BQB=0.863437;DP=2687;DP4=1583,1015,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12125e-10;MQSB=0.853681;RPB=0.999326;SGB=46.7622;VDB=0.854394;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.5:26860481 chr05:026860481 0 W/26860481-26860481 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.864725;DP=2694;DP4=1564,1018,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74525e-09;MQSB=0.753973;RPB=0.796937;SGB=39.6545;VDB=0.903547;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.5:26876380 chr05:026876380 0 W/26876380-26876380 FN1031-S Single Base Substitution T-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4124-S.SNP.5:26880849 chr05:026880849 0 W/26880849-26880849 FN4124-S SNP G -> T AC=2;AN=182;BQB=0.905698;DP=2638;DP4=1189,1320,8,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=1.66582e-07;MQSB=0.857092;RPB=0.777695;SGB=62.1548;VDB=0.0905246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S320I|416|LOC_Os05g46370|protein_coding|CODING|LOC_Os05g46370.1|2|1) FN1272-S.SNP.5:26890059 chr05:026890059 0 W/26890059-26890059 FN1272-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN490-S.SNP.5:26899096 chr05:026899096 0 W/26899096-26899096 FN490-S Single Base Substitution C-T INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN-236.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN-236 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-384.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN-384 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN-93.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN-93 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1008-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN1008-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1186-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN1186-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1227-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN1227-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1277-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN1277-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN317-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN317-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3971-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN3971-S SNP C -> T AC=2;AN=168;BQB=0.879149;DP=2717;DP4=1302,1311,6,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.64439e-10;MQSB=0.256731;RPB=0.141;SGB=83.1885;VDB=0.947987;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K78|133|LOC_Os05g46430|protein_coding|CODING|LOC_Os05g46430.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K78|147|LOC_Os05g46430|protein_coding|CODING|LOC_Os05g46430.1|3|1) FN478-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN478-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN678-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN678-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN941-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN941-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN980-S.SNP.5:26904105 chr05:026904105 0 W/26904105-26904105 FN980-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2630-S.SNP.5:26912145 chr05:026912145 0 W/26912145-26912145 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.735649;DP=5349;DP4=2556,2511,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94415e-13;MQSB=0.880503;RPB=0.965708;SGB=-38.4742;VDB=0.817125;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.5:26915392 chr05:026915392 0 W/26915392-26915392 W416-6-1 Single Base Substitution G-A INTRON HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. W416-6-1.SNP.5:26915393 chr05:026915393 0 W/26915393-26915393 W416-6-1 Single Base Substitution C-A INTRON HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2795-S.SNP.5:26917165 chr05:026917165 0 W/26917165-26917165 FN2795-S SNP A -> T AC=1;AN=198;BQB=0.536956;DP=4309;DP4=1951,2093,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.61258e-08;MQSB=0.6221;RPB=0.399729;SGB=47.3393;VDB=0.455815;EFF=UTR_5_PRIME(MODIFIER||95||400|LOC_Os05g46460|protein_coding|CODING|LOC_Os05g46460.1|1|1),UTR_5_PRIME(MODIFIER||95||377|LOC_Os05g46460|protein_coding|CODING|LOC_Os05g46460.3|1|1),UTR_5_PRIME(MODIFIER||95||358|LOC_Os05g46460|protein_coding|CODING|LOC_Os05g46460.4|1|1),UTR_5_PRIME(MODIFIER||95||313|LOC_Os05g46460|protein_coding|CODING|LOC_Os05g46460.5|1|1),UTR_5_PRIME(MODIFIER||95||313|LOC_Os05g46460|protein_coding|CODING|LOC_Os05g46460.6|1|1) FN_N2-29a-1.SNP.5:26919768 chr05:026919768 0 W/26919768-26919768 FN_N2-29a-1 Single Base Substitution A-G HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN3477-S.SNP.5:26922096 chr05:026922096 0 W/26922096-26922096 FN3477-S SNP A -> G AC=2;AN=184;BQB=0.945317;DP=2577;DP4=1287,1193,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.95377e-13;MQSB=0.978173;RPB=0.950747;SGB=98.4821;VDB=0.118927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.5:26922750 chr05:026922750 0 W/26922750-26922750 FN3280-S SNP A -> G AC=1;AN=184;BQB=0.975191;DP=2653;DP4=1310,1260,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.13599e-07;MQSB=0.970135;RPB=0.798667;SGB=25.1826;VDB=0.748814;EFF=INTRON(MODIFIER||||85|LOC_Os05g46470|protein_coding|CODING|LOC_Os05g46470.1|2|1) FN2195-S.SNP.5:26922832 chr05:026922832 0 W/26922832-26922832 FN2195-S SNP C -> G AC=1;AN=190;BQB=0.981396;DP=4736;DP4=2322,2143,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.64447e-09;MQSB=0.971968;RPB=0.665805;SGB=71.8647;VDB=0.194422;EFF=INTRON(MODIFIER||||85|LOC_Os05g46470|protein_coding|CODING|LOC_Os05g46470.1|2|1) W470-2-1.SNP.5:26929223 chr05:026929223 0 W/26929223-26929223 W470-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. W475-4-2.SNP.5:26935163 chr05:026935163 0 W/26935163-26935163 W475-4-2 Single Base Substitution T-A INTRON HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN1251-S.SNP.5:26939826 chr05:026939826 0 W/26939826-26939826 FN1251-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-85.SNP.5:26941968 chr05:026941968 0 W/26941968-26941968 FN-85 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g46510 polygalacturonase, putative, expressed SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1758-S.SNP.5:26947945 chr05:026947945 0 W/26947945-26947945 FN1758-S SNP A -> G AC=1;AN=188;BQB=0.876052;DP=3410;DP4=1450,1923,13,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.97053e-14;MQSB=0.783429;RPB=0.924026;SGB=-73.5561;VDB=0.919823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.5:26950441 chr05:026950441 0 W/26950441-26950441 FN3363-S SNP A -> T AC=2;AN=184;BQB=0.361821;DP=2889;DP4=1175,1603,15,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000346141;MQB=5.44834e-15;MQSB=0.985637;RPB=0.67517;SGB=161.787;VDB=0.624063;EFF=INTRON(MODIFIER||||55|LOC_Os05g46540|protein_coding|CODING|LOC_Os05g46540.1|1|1) W42-1-3S-1.SNP.5:26955732 chr05:026955732 0 W/26955732-26955732 W42-1-3S-1 Single Base Substitution C-T UTR_5_PRIME HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2121-S.SNP.5:26956318 chr05:026956318 0 W/26956318-26956318 FN2121-S SNP A -> G AC=1;AN=168;BQB=0.0992206;DP=1843;DP4=398,1426,3,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00404e-06;MQSB=0.57683;RPB=0.821234;SGB=-16.2342;VDB=0.0297528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.5:26957934 chr05:026957934 0 W/26957934-26957934 FN2417 SNP A -> G AC=1;AN=200;BQB=0.787655;DP=3082;DP4=1368,1447,13,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000973394;MQB=0.00098903;MQSB=0.0361684;RPB=0.873781;SGB=14.3054;VDB=0.741694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.5:26962100 chr05:026962100 0 W/26962100-26962100 FN2125-S SNP A -> T AC=1;AN=168;BQB=0.00306057;DP=4088;DP4=2015,1980,19,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.23678e-05;MQSB=0.667702;RPB=0.984971;SGB=-446.439;VDB=0.00606291;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.5:26962197 chr05:026962197 0 W/26962197-26962197 W423-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN504-S.SNP.5:26962696 chr05:026962696 0 W/26962696-26962696 FN504-S Single Base Substitution T-C INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-225.SNP.5:26971180 chr05:026971180 0 W/26971180-26971180 FN-225 Single Base Substitution T-A INTERGENIC HOMO SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1375-S.SNP.5:26971458 chr05:026971458 0 W/26971458-26971458 FN1375-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN_1017-1.SNP.5:26972525 chr05:026972525 0 W/26972525-26972525 FN_1017-1 Single Base Substitution C-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2553-S.SNP.5:26975942 chr05:026975942 0 W/26975942-26975942 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.896885;DP=4217;DP4=2139,1788,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.48246e-08;MQSB=0.867543;RPB=0.999989;SGB=43.7442;VDB=0.43643;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.5:26992606 chr05:026992606 0 W/26992606-26992606 FN1020-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN938-S.SNP.5:27002639 chr05:027002639 0 W/27002639-27002639 FN938-S Single Base Substitution T-C INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1540-S.SNP.5:27002677 chr05:027002677 0 W/27002677-27002677 FN1540-S Single Base Substitution A-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN4221-S.SNP.5:27003783 chr05:027003783 0 W/27003783-27003783 FN4221-S SNP C -> G AC=1;AN=170;BQB=0.948662;DP=3882;DP4=2519,1280,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=28;MQ0F=0.100979;MQB=0.260874;MQSB=3.49326e-39;RPB=0.439455;SGB=47.8722;VDB=0.0969851;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.5:27006277 chr05:027006277 0 W/27006277-27006277 FN-13 Single Base Substitution C-G INTRON HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.5:27006277 chr05:027006277 0 W/27006277-27006277 FN-13 Single Base Substitution C-G INTRON Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN3901-S.SNP.5:27007090 chr05:027007090 0 W/27007090-27007090 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.998425;DP=2421;DP4=1282,1046,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.36212e-09;MQSB=0.998845;RPB=0.924096;SGB=44.1818;VDB=0.740702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F333Y|529|LOC_Os05g46660|protein_coding|CODING|LOC_Os05g46660.1|4|1) FN1440-S.SNP.5:27013296 chr05:027013296 0 W/27013296-27013296 FN1440-S Single Base Substitution C-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2547-S.SNP.5:27015878 chr05:027015878 0 W/27015878-27015878 FN2547-S SNP A -> G AC=1;AN=198;BQB=0.990897;DP=3802;DP4=1699,1819,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00236718;MQB=4.75829e-06;MQSB=0.185129;RPB=0.699017;SGB=40.3588;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.5:27016406 chr05:027016406 0 W/27016406-27016406 FN354-S Single Base Substitution C-T INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN2254-S.SNP.5:27016928 chr05:027016928 0 W/27016928-27016928 FN2254-S SNP G -> T AC=1;AN=190;BQB=0.567889;DP=4786;DP4=2185,2261,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2545e-06;MQSB=0.848658;RPB=0.980743;SGB=-16.5452;VDB=0.202213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.5:27019048 chr05:027019048 0 W/27019048-27019048 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.985738;DP=2717;DP4=1413,1200,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.52626e-08;MQSB=0.993952;RPB=0.983351;SGB=49.0954;VDB=0.425716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S40L|183|LOC_Os05g46680|protein_coding|CODING|LOC_Os05g46680.1|1|1) FN323-S.SNP.5:27021176 chr05:027021176 0 W/27021176-27021176 FN323-S Single Base Substitution G-A INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1190-S.SNP.5:27022138 chr05:027022138 0 W/27022138-27022138 FN1190-S Single Base Substitution T-A INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2188-S.SNP.5:27032766 chr05:027032766 0 W/27032766-27032766 FN2188-S SNP C -> A AC=1;AN=190;BQB=0.726297;DP=3208;DP4=1430,1397,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.39248e-06;MQSB=0.00052806;RPB=0.991417;SGB=58.2031;VDB=0.176107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.5:27036903 chr05:027036903 0 W/27036903-27036903 FN3664-S SNP C -> A AC=2;AN=190;BQB=0.740067;DP=3059;DP4=1364,1515,10,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.00703e-13;MQSB=0.953514;RPB=0.784485;SGB=117.403;VDB=0.725374;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.5:27037928 chr05:027037928 0 W/27037928-27037928 FN3371-S SNP T -> C AC=1;AN=184;BQB=0.680911;DP=3084;DP4=1602,1375,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000159093;MQSB=0.810322;RPB=0.641274;SGB=39.699;VDB=0.795754;EFF=INTRON(MODIFIER||||298|LOC_Os05g46710|protein_coding|CODING|LOC_Os05g46710.1|1|1),INTRON(MODIFIER||||205|LOC_Os05g46710|protein_coding|CODING|LOC_Os05g46710.2|1|1) FN977-S.SNP.5:27048083 chr05:027048083 0 W/27048083-27048083 FN977-S Single Base Substitution G-C INTRON HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN427-S.SNP.5:27057981 chr05:027057981 0 W/27057981-27057981 FN427-S Single Base Substitution T-A INTRON HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN427-S.SNP.5:27057982 chr05:027057982 0 W/27057982-27057982 FN427-S Single Base Substitution A-T INTRON HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1757-S.SNP.5:27065311 chr05:027065311 0 W/27065311-27065311 FN1757-S SNP A -> G AC=2;AN=188;BQB=0.578653;DP=3916;DP4=1988,1872,20,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.90324e-17;MQSB=0.934426;RPB=0.470754;SGB=79.4854;VDB=0.378084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.5:27066347 chr05:027066347 0 W/27066347-27066347 FN2499 SNP T -> C AC=2;AN=200;BQB=0.925301;DP=4838;DP4=1829,2678,13,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.47275e-21;MQSB=0.997577;RPB=0.372469;SGB=169.394;VDB=0.603278;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.5:27067324 chr05:027067324 0 W/27067324-27067324 FN-268 Single Base Substitution G-T INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-268.SNP.5:27067325 chr05:027067325 0 W/27067325-27067325 FN-268 Single Base Substitution C-G INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3760-S.SNP.5:27084316 chr05:027084316 0 W/27084316-27084316 FN3760-S SNP G -> A AC=2;AN=190;BQB=0.703155;DP=2395;DP4=1219,1026,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31486e-11;MQSB=0.984747;RPB=0.983576;SGB=112.85;VDB=0.854972;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.5:27090773 chr05:027090773 0 W/27090773-27090773 FN946-S Single Base Substitution C-A INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2780-S.SNP.5:27093108 chr05:027093108 0 W/27093108-27093108 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.589031;DP=3658;DP4=1501,1975,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.22941e-07;MQSB=0.549496;RPB=0.895585;SGB=32.9588;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.5:27093915 chr05:027093915 0 W/27093915-27093915 FN785-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g46780 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3296-S.SNP.5:27113797 chr05:027113797 0 W/27113797-27113797 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.962663;DP=3017;DP4=1384,1545,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0178986;MQB=0.000246539;MQSB=0.261932;RPB=0.895329;SGB=57.786;VDB=0.708727;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A833V|1164|LOC_Os05g46810|protein_coding|CODING|LOC_Os05g46810.1|2|1) FN2599-S.SNP.5:27114453 chr05:027114453 0 W/27114453-27114453 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.947536;DP=4652;DP4=2065,2382,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0799656;MQB=0.837394;MQSB=6.86636e-44;RPB=0.0898469;SGB=22.1104;VDB=0.160226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1052M|1164|LOC_Os05g46810|protein_coding|CODING|LOC_Os05g46810.1|2|1) FN2688-S.SNP.5:27130193 chr05:027130193 0 W/27130193-27130193 FN2688-S SNP G -> A AC=1;AN=200;BQB=0.579409;DP=9988;DP4=4540,4915,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000439671;MQSB=0.930235;RPB=0.169537;SGB=3.06925;VDB=0.432301;EFF=INTRON(MODIFIER||||422|LOC_Os05g46874|protein_coding|CODING|LOC_Os05g46874.1|2|1) FN486-S.SNP.5:27132970 chr05:027132970 0 W/27132970-27132970 FN486-S Single Base Substitution A-G INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN917-S.SNP.5:27144275 chr05:027144275 0 W/27144275-27144275 FN917-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g46900 expressed protein SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1422-S.SNP.5:27144432 chr05:027144432 0 W/27144432-27144432 FN1422-S Single Base Substitution G-A INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2201-S.SNP.5:27145679 chr05:027145679 0 W/27145679-27145679 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.675139;DP=9260;DP4=4870,3921,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.34142e-08;MQSB=0.516301;RPB=0.269451;SGB=44.0907;VDB=0.322585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.5:27146518 chr05:027146518 0 W/27146518-27146518 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.652488;DP=5284;DP4=2294,2478,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0422029;MQB=0.0100021;MQSB=5.55279e-09;RPB=0.479085;SGB=72.5245;VDB=0.299912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.5:27149320 chr05:027149320 0 W/27149320-27149320 FN3971-S SNP A -> G AC=1;AN=168;BQB=0.589864;DP=4710;DP4=1603,2894,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.00127389;MQB=0.268459;MQSB=9.49581e-07;RPB=0.775374;SGB=29.4772;VDB=0.430391;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.5:27158372 chr05:027158372 0 W/27158372-27158372 FN584-S Single Base Substitution C-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. CW-631-3-1.SNP.5:27162788 chr05:027162788 0 W/27162788-27162788 CW-631-3-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g46940 expressed protein SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2320.SNP.5:27167802 chr05:027167802 0 W/27167802-27167802 FN2320 SNP G -> A AC=1;AN=192;BQB=0.427175;DP=10045;DP4=5283,4180,21,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.44265e-18;MQSB=0.405645;RPB=0.855794;SGB=-77.4217;VDB=0.707102;EFF=INTERGENIC(MODIFIER||||||||||1) FN2152-S.SNP.5:27171128 chr05:027171128 0 W/27171128-27171128 FN2152-S SNP T -> A AC=1;AN=168;BQB=2.92576e-06;DP=7862;DP4=3947,3811,31,32;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.36991e-20;MQSB=0.943719;RPB=0.872534;SGB=-1142.21;VDB=0.905548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L88I|109|LOC_Os05g46954|protein_coding|CODING|LOC_Os05g46954.2|2|1),UTR_3_PRIME(MODIFIER||785||69|LOC_Os05g46954|protein_coding|CODING|LOC_Os05g46954.1|1|1) FN1635-S.SNP.5:27171711 chr05:027171711 0 W/27171711-27171711 FN1635-S SNP A -> T AC=1;AN=188;BQB=0.88696;DP=7561;DP4=3555,3945,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.12131e-12;MQSB=0.978142;RPB=0.998065;SGB=-69.186;VDB=0.0282285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.5:27176154 chr05:027176154 0 W/27176154-27176154 FN2155-S SNP G -> A AC=2;AN=168;BQB=0.060876;DP=3433;DP4=1535,1847,17,19;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00145645;MQB=5.94931e-06;MQSB=0.00738319;RPB=0.428911;SGB=32.807;VDB=0.820192;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.5:27184457 chr05:027184457 0 W/27184457-27184457 FN2350 SNP G -> C AC=1;AN=192;BQB=0.20164;DP=5234;DP4=2258,2418,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.73188e-11;MQSB=0.861432;RPB=0.863979;SGB=-36.6348;VDB=0.780824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.5:27187636 chr05:027187636 0 W/27187636-27187636 FN1027-S Single Base Substitution C-T INTRON HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN896-S.SNP.5:27189105 chr05:027189105 0 W/27189105-27189105 FN896-S Single Base Substitution C-T INTRON HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN-336.SNP.5:27190350 chr05:027190350 0 W/27190350-27190350 FN-336 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g47450 retrotransposon protein, putative, unclassified, expressed SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN_789-2-1.SNP.5:27196669 chr05:027196669 0 W/27196669-27196669 FN_789-2-1 Single Base Substitution G-A Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1008-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN1008-S Single Base Substitution T-C INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1186-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN1186-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1349-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN1349-S Single Base Substitution T-C INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN2564-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN2564-S SNP T -> C AC=2;AN=198;BQB=0.920398;DP=4062;DP4=2055,1848,10,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.90702e-10;MQSB=0.94423;RPB=0.745452;SGB=72.5245;VDB=0.90975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN2648-S SNP T -> C AC=2;AN=200;BQB=0.993517;DP=4766;DP4=2406,2170,17,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.9874e-17;MQSB=0.985192;RPB=0.968239;SGB=132.552;VDB=0.115962;EFF=INTERGENIC(MODIFIER||||||||||1) FN317-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN317-S Single Base Substitution T-C INTERGENIC HOMO SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3424-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN3424-S SNP T -> C AC=2;AN=184;BQB=0.97245;DP=2516;DP4=1277,1129,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.03183e-17;MQSB=0.96209;RPB=0.999771;SGB=130.135;VDB=0.523457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN3615-S SNP T -> C AC=1;AN=190;BQB=0.835571;DP=2805;DP4=1376,1303,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74454e-13;MQSB=0.977673;RPB=0.612556;SGB=18.096;VDB=0.926673;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN4072-S SNP T -> C AC=2;AN=182;BQB=0.910174;DP=2670;DP4=1373,1232,11,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.85846e-10;MQSB=0.992571;RPB=0.601737;SGB=62.1548;VDB=0.655886;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN4201-S SNP T -> C AC=1;AN=170;BQB=0.741598;DP=2538;DP4=1315,1110,7,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.89573e-08;MQSB=0.890093;RPB=0.940264;SGB=29.6545;VDB=0.846999;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN478-S Single Base Substitution T-C INTERGENIC HOMO SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN941-S.SNP.5:27200736 chr05:027200736 0 W/27200736-27200736 FN941-S Single Base Substitution T-C INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3543-S.SNP.5:27203528 chr05:027203528 0 W/27203528-27203528 FN3543-S SNP C -> T AC=1;AN=188;BQB=0.979662;DP=3211;DP4=1931,1195,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.81346e-05;MQSB=0.999917;RPB=0.954592;SGB=39.8925;VDB=0.0417261;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.5:27203528 chr05:027203528 0 W/27203528-27203528 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.996458;DP=3232;DP4=1793,1348,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.72251e-07;MQSB=0.84067;RPB=0.851406;SGB=53.1331;VDB=0.469714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.5:27204629 chr05:027204629 0 W/27204629-27204629 FN3442-S SNP C -> T AC=2;AN=184;BQB=0.994361;DP=2562;DP4=1287,1191,10,8;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.58454e-10;MQSB=0.782157;RPB=0.999026;SGB=75.8731;VDB=0.083828;EFF=INTRON(MODIFIER||||1302|LOC_Os05g47490|protein_coding|CODING|LOC_Os05g47490.1|3|1) FN445-S.SNP.5:27209734 chr05:027209734 0 W/27209734-27209734 FN445-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1619-S.SNP.5:27210257 chr05:027210257 0 W/27210257-27210257 FN1619-S Single Base Substitution T-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1561-S.SNP.5:27210441 chr05:027210441 0 W/27210441-27210441 FN1561-S Single Base Substitution T-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2281.SNP.5:27216529 chr05:027216529 0 W/27216529-27216529 FN2281 SNP A -> G AC=2;AN=192;BQB=0.510858;DP=5369;DP4=2692,2382,35,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.86293e-37;MQSB=0.852347;RPB=0.441128;SGB=217.997;VDB=0.753283;EFF=INTRON(MODIFIER||||1213|LOC_Os05g47500|protein_coding|CODING|LOC_Os05g47500.1|11|1) FN1015-S.SNP.5:27219533 chr05:027219533 0 W/27219533-27219533 FN1015-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3551-S.SNP.5:27219533 chr05:027219533 0 W/27219533-27219533 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.989271;DP=4958;DP4=2758,2118,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.07547e-07;MQSB=0.652331;RPB=0.305351;SGB=53.5223;VDB=0.585809;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G173|440|LOC_Os05g47510|protein_coding|CODING|LOC_Os05g47510.1|1|1) FN4122-S.SNP.5:27219533 chr05:027219533 0 W/27219533-27219533 FN4122-S SNP C -> T AC=1;AN=182;BQB=0.99317;DP=4148;DP4=2191,1878,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.76094e-09;MQSB=0.951347;RPB=0.0881845;SGB=57.644;VDB=0.27967;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G173|440|LOC_Os05g47510|protein_coding|CODING|LOC_Os05g47510.1|1|1) FN1401-S.SNP.5:27224063 chr05:027224063 0 W/27224063-27224063 FN1401-S Single Base Substitution C-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN4175-S.SNP.5:27227725 chr05:027227725 0 W/27227725-27227725 FN4175-S SNP T -> A AC=1;AN=170;BQB=0.969029;DP=2522;DP4=1117,1312,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.76759e-07;MQSB=0.809457;RPB=0.407899;SGB=34.878;VDB=0.355085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.5:27228857 chr05:027228857 0 W/27228857-27228857 FN3650-S SNP T -> C AC=1;AN=190;BQB=0.463642;DP=2545;DP4=1464,875,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21717e-06;MQSB=0.852872;RPB=0.934892;SGB=-34.0938;VDB=0.199796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.5:27229451 chr05:027229451 0 W/27229451-27229451 FN2385 SNP A -> T AC=1;AN=192;BQB=0.999449;DP=5382;DP4=2546,2580,19,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.43806e-22;MQSB=0.985662;RPB=0.939557;SGB=90.4583;VDB=0.819454;EFF=UTR_3_PRIME(MODIFIER||244||495|LOC_Os05g47540|protein_coding|CODING|LOC_Os05g47540.1|12|1),UTR_3_PRIME(MODIFIER||244||491|LOC_Os05g47540|protein_coding|CODING|LOC_Os05g47540.2|11|1),UTR_3_PRIME(MODIFIER||244||387|LOC_Os05g47540|protein_coding|CODING|LOC_Os05g47540.3|13|1),UTR_3_PRIME(MODIFIER||244||387|LOC_Os05g47540|protein_coding|CODING|LOC_Os05g47540.4|10|1),UTR_3_PRIME(MODIFIER||244||387|LOC_Os05g47540|protein_coding|CODING|LOC_Os05g47540.5|12|1) FN4072-S.SNP.5:27234728 chr05:027234728 0 W/27234728-27234728 FN4072-S SNP A -> C AC=2;AN=182;BQB=0.98791;DP=2801;DP4=1204,1493,13,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.16296e-17;MQSB=0.94348;RPB=0.999984;SGB=120.796;VDB=0.135824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.5:27241554 chr05:027241554 0 W/27241554-27241554 FN2334 SNP C -> T AC=2;AN=192;BQB=0.895101;DP=5135;DP4=2591,2255,14,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.16538e-16;MQSB=0.99732;RPB=0.915065;SGB=86.1165;VDB=0.909892;EFF=INTRON(MODIFIER||||567|LOC_Os05g47550|protein_coding|CODING|LOC_Os05g47550.1|3|1) FN2252-S.SNP.5:27243657 chr05:027243657 0 W/27243657-27243657 FN2252-S SNP C -> G AC=1;AN=190;BQB=0.998711;DP=4534;DP4=2142,1943,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000220556;MQB=4.68302e-08;MQSB=0.856335;RPB=0.777795;SGB=28.7675;VDB=0.0318091;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.5:27244615 chr05:027244615 0 W/27244615-27244615 FN1711-S SNP G -> A AC=1;AN=188;BQB=0.00442322;DP=3640;DP4=2117,1455,26,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.25385e-08;MQSB=0.988861;RPB=0.0206605;SGB=-360.519;VDB=0.392873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.5:27248037 chr05:027248037 0 W/27248037-27248037 FN2441 SNP T -> A AC=2;AN=200;BQB=0.908765;DP=4992;DP4=2409,2217,45,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.20719e-38;MQSB=0.998658;RPB=0.51162;SGB=246.393;VDB=0.432443;EFF=INTRON(MODIFIER||||559|LOC_Os05g47560|protein_coding|CODING|LOC_Os05g47560.1|4|1) FN1337-S.SNP.5:27250746 chr05:027250746 0 W/27250746-27250746 FN1337-S Single Base Substitution G-A INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN750-S.SNP.5:27252871 chr05:027252871 0 W/27252871-27252871 FN750-S Single Base Substitution T-A INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN750-S.SNP.5:27252872 chr05:027252872 0 W/27252872-27252872 FN750-S Single Base Substitution T-A INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN750-S.SNP.5:27252873 chr05:027252873 0 W/27252873-27252873 FN750-S Single Base Substitution C-A INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN1669-S.SNP.5:27261187 chr05:027261187 0 W/27261187-27261187 FN1669-S SNP G -> T AC=1;AN=188;BQB=0.670288;DP=2673;DP4=1317,1292,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.32603e-07;MQSB=0.97023;RPB=0.78038;SGB=35.9843;VDB=0.0975129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.5:27263446 chr05:027263446 0 W/27263446-27263446 FN2461 SNP C -> T AC=1;AN=200;BQB=0.997757;DP=5845;DP4=2456,2999,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64735e-09;MQSB=0.617841;RPB=0.931696;SGB=9.48993;VDB=0.204178;EFF=INTERGENIC(MODIFIER||||||||||1) FN1435-S.SNP.5:27264508 chr05:027264508 0 W/27264508-27264508 FN1435-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g47590 expressed protein SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN950-S.SNP.5:27266794 chr05:027266794 0 W/27266794-27266794 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN4204-S.SNP.5:27269059 chr05:027269059 0 W/27269059-27269059 FN4204-S SNP T -> C AC=1;AN=170;BQB=0.915676;DP=2626;DP4=1188,1251,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0936786;MQB=0.843235;MQSB=0.166663;RPB=0.453638;SGB=70.0854;VDB=0.80613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.5:27271858 chr05:027271858 0 W/27271858-27271858 FN2488 SNP C -> T AC=1;AN=200;BQB=0.0576172;DP=5801;DP4=2126,3389,13,17;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.108774;MQB=0.170648;MQSB=0;RPB=0.934901;SGB=97.9523;VDB=0.737782;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L110F|152|LOC_Os05g47600|protein_coding|CODING|LOC_Os05g47600.1|1|1) FN2210-S.SNP.5:27273874 chr05:027273874 0 W/27273874-27273874 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.4364;DP=3521;DP4=1728,1544,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.10764;MQB=0.999319;MQSB=8.90101e-21;RPB=0.925676;SGB=49.0954;VDB=0.0553161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.5:27279583 chr05:027279583 0 W/27279583-27279583 FN2262-S SNP T -> G AC=2;AN=190;BQB=0.736391;DP=4831;DP4=1861,2342,35,24;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0827986;MQB=0.380882;MQSB=0;RPB=0.103081;SGB=136.03;VDB=0.603601;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atC|I528|1731|LOC_Os05g47610|protein_coding|CODING|LOC_Os05g47610.1|3|1) FN2593-S.SNP.5:27280539 chr05:027280539 0 W/27280539-27280539 FN2593-S SNP A -> T AC=1;AN=198;BQB=0.721171;DP=3808;DP4=1662,1865,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0609244;MQB=0.85287;MQSB=0.406458;RPB=0.819716;SGB=112.051;VDB=0.320482;EFF=INTRON(MODIFIER||||1731|LOC_Os05g47610|protein_coding|CODING|LOC_Os05g47610.1|2|1) FN2110-S.SNP.5:27283923 chr05:027283923 0 W/27283923-27283923 FN2110-S SNP C -> T AC=2;AN=168;BQB=0.0630638;DP=2802;DP4=1627,1098,18,10;HOB=0.0235261;ICB=0.494119;MQ=23;MQ0F=0.282655;MQB=0.368988;MQSB=0;RPB=0.518588;SGB=-43.4892;VDB=0.263785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.5:27284816 chr05:027284816 0 W/27284816-27284816 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.467512;DP=4115;DP4=2050,1807,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243013;MQB=4.1198e-05;MQSB=0.0122352;RPB=0.996998;SGB=31.1689;VDB=0.00403653;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.5:27304924 chr05:027304924 0 W/27304924-27304924 FN_N1-220-1 Single Base Substitution G-A HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN2691-S.SNP.5:27305203 chr05:027305203 0 W/27305203-27305203 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.749258;DP=5068;DP4=2274,2588,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.34154e-15;MQSB=0.979965;RPB=0.052601;SGB=109.527;VDB=0.534081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.5:27310951 chr05:027310951 0 W/27310951-27310951 FN3385-S SNP T -> A AC=1;AN=184;BQB=0.862984;DP=2968;DP4=1483,1416,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00021947;MQSB=0.980588;RPB=0.999137;SGB=30.6558;VDB=0.412644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.5:27316939 chr05:027316939 0 W/27316939-27316939 FN2095-S SNP T -> A AC=2;AN=168;BQB=0.972533;DP=3679;DP4=1636,1990,20,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.06164e-22;MQSB=0.971106;RPB=0.314158;SGB=87.8168;VDB=0.470521;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.5:27317756 chr05:027317756 0 W/27317756-27317756 FN530-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g47670 zinc finger, C3HC4 type domain containing protein, expressed SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN530-S.SNP.5:27317757 chr05:027317757 0 W/27317757-27317757 FN530-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. W313-1-1-1-1.SNP.5:27318857 chr05:027318857 0 W/27318857-27318857 W313-1-1-1-1 Single Base Substitution T-A INTRON HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2232-S.SNP.5:27319661 chr05:027319661 0 W/27319661-27319661 FN2232-S SNP T -> G AC=1;AN=190;BQB=0.988787;DP=4286;DP4=2319,1728,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.01569e-09;MQSB=0.54845;RPB=0.902772;SGB=71.8647;VDB=0.75716;EFF=INTRON(MODIFIER||||364|LOC_Os05g47670|protein_coding|CODING|LOC_Os05g47670.1|2|1) FN3305-S.SNP.5:27326139 chr05:027326139 0 W/27326139-27326139 FN3305-S SNP A -> G AC=1;AN=184;BQB=0.759456;DP=3246;DP4=1477,1593,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.91115e-05;MQSB=0.818364;RPB=0.495909;SGB=35.1773;VDB=0.613304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.5:27358364 chr05:027358364 0 W/27358364-27358364 FN2309 SNP C -> A AC=1;AN=192;BQB=0.917902;DP=3132;DP4=1114,1874,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=5.5007e-07;MQSB=3.86803e-05;RPB=0.978197;SGB=72.0322;VDB=0.0205044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.5:27358365 chr05:027358365 0 W/27358365-27358365 FN2309 SNP T -> A AC=1;AN=192;BQB=0.554213;DP=3146;DP4=1110,1888,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=5.05613e-07;MQSB=2.67034e-05;RPB=0.965206;SGB=72.0322;VDB=0.0204054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.5:27365168 chr05:027365168 0 W/27365168-27365168 FN3506-S SNP A -> C AC=1;AN=188;BQB=0.990779;DP=2822;DP4=1233,1431,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.50174e-08;MQSB=0.61074;RPB=0.785335;SGB=-0.634963;VDB=0.22465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K280T|684|LOC_Os05g47770|protein_coding|CODING|LOC_Os05g47770.1|2|1) FN_N2-29a-1.SNP.5:27370940 chr05:027370940 0 W/27370940-27370940 FN_N2-29a-1 Single Base Substitution A-G HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN409-S.SNP.5:27379408 chr05:027379408 0 W/27379408-27379408 FN409-S Single Base Substitution T-C INTRON HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3858-S.SNP.5:27386558 chr05:027386558 0 W/27386558-27386558 FN3858-S SNP A -> T AC=1;AN=158;BQB=0.401985;DP=2263;DP4=1169,991,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.03102e-06;MQSB=0.869588;RPB=0.797167;SGB=44.1818;VDB=0.623554;EFF=INTRON(MODIFIER||||911|LOC_Os05g47790|protein_coding|CODING|LOC_Os05g47790.1|2|1) FN4082-S.SNP.5:27391488 chr05:027391488 0 W/27391488-27391488 FN4082-S SNP T -> A AC=1;AN=182;BQB=0.955356;DP=3186;DP4=1702,1367,4,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.14798e-08;MQSB=0.920945;RPB=0.985279;SGB=46.1603;VDB=0.857478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-88.SNP.5:27395172 chr05:027395172 0 W/27395172-27395172 FN-88 Single Base Substitution C-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN-88.SNP.5:27395174 chr05:027395174 0 W/27395174-27395174 FN-88 Single Base Substitution G-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN1704-S.SNP.5:27400839 chr05:027400839 0 W/27400839-27400839 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.272463;DP=3773;DP4=1586,2122,17,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.27631e-16;MQSB=0.971495;RPB=0.616455;SGB=-3.04727;VDB=0.651946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.5:27402347 chr05:027402347 0 W/27402347-27402347 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.951332;DP=2852;DP4=1345,1352,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.37032e-06;MQSB=0.912006;RPB=0.255053;SGB=14.8923;VDB=0.117464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.5:27404796 chr05:027404796 0 W/27404796-27404796 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN4180-S.SNP.5:27411527 chr05:027411527 0 W/27411527-27411527 FN4180-S SNP A -> T AC=1;AN=170;BQB=0.877619;DP=2481;DP4=1191,1223,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000204905;MQSB=0.994794;RPB=0.712327;SGB=30.1021;VDB=0.847599;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.5:27413929 chr05:027413929 0 W/27413929-27413929 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.770864;DP=4507;DP4=2083,2117,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81432e-16;MQSB=0.764275;RPB=0.692597;SGB=68.5625;VDB=0.770439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P88L|210|LOC_Os05g47820|protein_coding|CODING|LOC_Os05g47820.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P88L|210|LOC_Os05g47820|protein_coding|CODING|LOC_Os05g47820.1|1|1) FN465-S.SNP.5:27418315 chr05:027418315 0 W/27418315-27418315 FN465-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os05g47830 expressed protein SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN465-S.SNP.5:27418316 chr05:027418316 0 W/27418316-27418316 FN465-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN465-S.SNP.5:27418317 chr05:027418317 0 W/27418317-27418317 FN465-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g47830 expressed protein SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3916-S.SNP.5:27428050 chr05:027428050 0 W/27428050-27428050 FN3916-S SNP G -> T AC=1;AN=158;BQB=0.570682;DP=3276;DP4=1590,1349,15,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.38812e-11;MQSB=0.740401;RPB=0.999176;SGB=71.1374;VDB=0.751599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.5:27445813 chr05:027445813 0 W/27445813-27445813 FN3983-S SNP G -> C AC=1;AN=168;BQB=0.976171;DP=2465;DP4=961,1288,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000203104;MQSB=0.13977;RPB=0.821524;SGB=24.4556;VDB=0.681428;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L25|798|LOC_Os05g47850|protein_coding|CODING|LOC_Os05g47850.1|1|1) FN_N1-116-1.SNP.5:27446151 chr05:027446151 0 W/27446151-27446151 FN_N1-116-1 Single Base Substitution G-A HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN-174.SNP.5:27450402 chr05:027450402 0 W/27450402-27450402 FN-174 Single Base Substitution A-C INTRON HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN_N1-169-1.SNP.5:27454543 chr05:027454543 0 W/27454543-27454543 FN_N1-169-1 Single Base Substitution C-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN_N1-169-1.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 FN_N1-169-1 Single Base Substitution G-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-2.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-2 Single Base Substitution G-A INTRON Homo SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-3 Single Base Substitution G-A INTRON Homo SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-4 Single Base Substitution G-A INTRON Homo SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-5 Single Base Substitution G-A INTRON Homo SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-6 Single Base Substitution G-A INTRON Homo SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-7 Single Base Substitution G-A INTRON Homo SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-8 Single Base Substitution G-A INTRON Homo SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.5:27454544 chr05:027454544 0 W/27454544-27454544 N1-169-9 Single Base Substitution G-A INTRON Homo SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN2139-S.SNP.5:27470791 chr05:027470791 0 W/27470791-27470791 FN2139-S SNP C -> T AC=2;AN=168;BQB=0.397866;DP=4099;DP4=2119,1913,27,23;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0602586;MQB=0.0464408;MQSB=3.71546e-08;RPB=0.980067;SGB=-219.286;VDB=0.572812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G511D|1577|LOC_Os05g47920|protein_coding|CODING|LOC_Os05g47920.1|4|1) FN2251-S.SNP.5:27485944 chr05:027485944 0 W/27485944-27485944 FN2251-S SNP A -> T AC=2;AN=190;BQB=0.977395;DP=4562;DP4=1986,2203,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.17458e-10;MQSB=0.991942;RPB=0.745843;SGB=71.8647;VDB=0.492397;EFF=UTR_3_PRIME(MODIFIER||67||490|LOC_Os05g47950|protein_coding|CODING|LOC_Os05g47950.1|1|1) FN2362.SNP.5:27504346 chr05:027504346 0 W/27504346-27504346 FN2362 SNP A -> T AC=1;AN=192;BQB=0.277728;DP=5429;DP4=2602,2649,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.47917e-08;MQSB=0.58226;RPB=0.0229968;SGB=-36.6348;VDB=0.0822431;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.5:27506876 chr05:027506876 0 W/27506876-27506876 FN1751-S SNP A -> T AC=2;AN=188;BQB=0.593079;DP=4360;DP4=2408,1860,28,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.0621e-22;MQSB=0.998646;RPB=0.715469;SGB=-291.501;VDB=0.272856;EFF=INTRON(MODIFIER||||662|LOC_Os05g47970|protein_coding|CODING|LOC_Os05g47970.1|7|1) FN-409.SNP.5:27508126 chr05:027508126 0 W/27508126-27508126 FN-409 Single Base Substitution G-A INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-409.SNP.5:27508128 chr05:027508128 0 W/27508128-27508128 FN-409 Single Base Substitution T-A INTRON HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3707-S.SNP.5:27511544 chr05:027511544 0 W/27511544-27511544 FN3707-S SNP C -> A AC=1;AN=190;BQB=0.570635;DP=3104;DP4=1613,1377,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.22547e-08;MQSB=0.896204;RPB=0.306526;SGB=26.2136;VDB=0.22877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G256V|552|LOC_Os05g47980|protein_coding|CODING|LOC_Os05g47980.1|5|1) FN4136-S.SNP.5:27514502 chr05:027514502 0 W/27514502-27514502 FN4136-S SNP G -> C AC=1;AN=170;BQB=0.944597;DP=1973;DP4=919,899,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.18833e-05;MQSB=0.235218;RPB=0.841191;SGB=47.8722;VDB=0.133439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.5:27516401 chr05:027516401 0 W/27516401-27516401 FN1265-S Single Base Substitution C-A INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1106-S.SNP.5:27520478 chr05:027520478 0 W/27520478-27520478 FN1106-S Single Base Substitution G-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN-232.SNP.5:27520583 chr05:027520583 0 W/27520583-27520583 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2461.SNP.5:27526706 chr05:027526706 0 W/27526706-27526706 FN2461 SNP T -> C AC=1;AN=200;BQB=0.93463;DP=4723;DP4=2380,2158,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.06914e-14;MQSB=0.957805;RPB=0.877101;SGB=114.132;VDB=0.256517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.5:27530780 chr05:027530780 0 W/27530780-27530780 FN1315-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1096-S.SNP.5:27533052 chr05:027533052 0 W/27533052-27533052 FN1096-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g48020 SNARE domain containing protein, putative, expressed SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3937-S.SNP.5:27541819 chr05:027541819 0 W/27541819-27541819 FN3937-S SNP A -> G AC=1;AN=158;BQB=0.952708;DP=2570;DP4=1209,1259,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.43645e-11;MQSB=0.622635;RPB=0.766842;SGB=57.6596;VDB=0.0814467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.5:27542694 chr05:027542694 0 W/27542694-27542694 FN2588-S SNP G -> C AC=2;AN=198;BQB=0.64682;DP=4410;DP4=2198,1979,27,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.03711e-29;MQSB=0.92789;RPB=0.00772605;SGB=233.354;VDB=0.00237734;EFF=INTRON(MODIFIER||||500|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.1|1|1),INTRON(MODIFIER||||408|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.2|1|1),INTRON(MODIFIER||||306|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.3|1|1),INTRON(MODIFIER||||306|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.4|1|1) FN1287-S.SNP.5:27542771 chr05:027542771 0 W/27542771-27542771 FN1287-S Single Base Substitution A-C INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3842-S.SNP.5:27542771 chr05:027542771 0 W/27542771-27542771 FN3842-S SNP A -> C AC=2;AN=190;BQB=0.978274;DP=2891;DP4=1180,1510,13,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.18201e-18;MQSB=0.744732;RPB=0.999901;SGB=162.942;VDB=0.698716;EFF=INTRON(MODIFIER||||500|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.1|1|1),INTRON(MODIFIER||||408|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.2|1|1),INTRON(MODIFIER||||306|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.3|1|1),INTRON(MODIFIER||||306|LOC_Os05g48040|protein_coding|CODING|LOC_Os05g48040.4|1|1) FN2559-S.SNP.5:27546555 chr05:027546555 0 W/27546555-27546555 FN2559-S SNP C -> A AC=1;AN=198;BQB=0.435159;DP=4426;DP4=2168,2027,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68855e-05;MQSB=0.954704;RPB=0.642002;SGB=11.1786;VDB=0.448353;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.5:27548683 chr05:027548683 0 W/27548683-27548683 FN3420-S SNP G -> A AC=2;AN=184;BQB=0.21659;DP=2489;DP4=1022,1391,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.63489e-09;MQSB=0.999946;RPB=0.780519;SGB=93.9603;VDB=0.889441;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L14|198|LOC_Os05g48050|protein_coding|CODING|LOC_Os05g48050.1|1|1) FN3528-S.SNP.5:27549571 chr05:027549571 0 W/27549571-27549571 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.99153;DP=2555;DP4=1353,1105,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.32342e-12;MQSB=0.999957;RPB=0.48405;SGB=89.8686;VDB=0.967227;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.5:27550577 chr05:027550577 0 W/27550577-27550577 FN526-S Single Base Substitution A-T INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3610-S.SNP.5:27552853 chr05:027552853 0 W/27552853-27552853 FN3610-S SNP C -> T AC=1;AN=190;BQB=0.870387;DP=2398;DP4=1294,998,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55535e-05;MQSB=0.467413;RPB=0.988635;SGB=30.8803;VDB=0.159538;EFF=UTR_5_PRIME(MODIFIER||326||422|LOC_Os05g48060|protein_coding|CODING|LOC_Os05g48060.1|1|1) FN943-S.SNP.5:27563516 chr05:027563516 0 W/27563516-27563516 FN943-S Single Base Substitution C-T INTERGENIC HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1048-S.SNP.5:27566594 chr05:027566594 0 W/27566594-27566594 FN1048-S Single Base Substitution A-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3110-S.SNP.5:27568869 chr05:027568869 0 W/27568869-27568869 FN3110-S SNP C -> T AC=1;AN=184;BQB=0.982557;DP=2987;DP4=1542,1369,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.239705;MQB=0.625456;MQSB=0.0165704;RPB=0.747172;SGB=28.3187;VDB=0.998295;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I601|1054|LOC_Os05g48090|protein_coding|CODING|LOC_Os05g48090.1|2|1) FN3926-S.SNP.5:27575789 chr05:027575789 0 W/27575789-27575789 FN3926-S SNP C -> T AC=2;AN=158;BQB=0.816334;DP=2720;DP4=1323,1252,29,16;HOB=0.024996;ICB=0.493752;MQ=29;MQ0F=0.21875;MQB=0.959369;MQSB=0.00200644;RPB=0.0728375;SGB=141.896;VDB=0.370133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A375V|582|LOC_Os05g48110|protein_coding|CODING|LOC_Os05g48110.1|2|1) FN4044-S.SNP.5:27593380 chr05:027593380 0 W/27593380-27593380 FN4044-S SNP C -> T AC=2;AN=168;BQB=0.900668;DP=2702;DP4=1245,1321,9,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.06025e-15;MQSB=0.97859;RPB=0.752489;SGB=100.912;VDB=0.459448;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.5:27593381 chr05:027593381 0 W/27593381-27593381 FN4044-S SNP C -> T AC=2;AN=168;BQB=0.982298;DP=2705;DP4=1244,1329,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.71613e-17;MQSB=0.96961;RPB=0.976201;SGB=21.3605;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.5:27600147 chr05:027600147 0 W/27600147-27600147 FN1375-S Single Base Substitution G-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2696-S.SNP.5:27600410 chr05:027600410 0 W/27600410-27600410 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.962757;DP=4706;DP4=2389,2044,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79838e-10;MQSB=0.999805;RPB=0.999374;SGB=86.5007;VDB=0.072257;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.5:27602088 chr05:027602088 0 W/27602088-27602088 FN-307 Single Base Substitution A-G INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-307.SNP.5:27602093 chr05:027602093 0 W/27602093-27602093 FN-307 Single Base Substitution A-T INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN4046-S.SNP.5:27607204 chr05:027607204 0 W/27607204-27607204 FN4046-S SNP G -> A AC=1;AN=168;BQB=0.990505;DP=2961;DP4=1466,1375,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48277e-08;MQSB=0.501505;RPB=0.749617;SGB=45.0404;VDB=0.0585169;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P77L|210|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P77L|196|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P77L|185|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.3|2|1),SPLICE_SITE_REGION(LOW||||210|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.1|2|1),SPLICE_SITE_REGION(LOW||||196|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.2|2|1),SPLICE_SITE_REGION(LOW||||185|LOC_Os05g48160|protein_coding|CODING|LOC_Os05g48160.3|2|1) FN1617-S.SNP.5:27610245 chr05:027610245 0 W/27610245-27610245 FN1617-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os05g48170 retrotransposon protein, putative, unclassified, expressed SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN-349.SNP.5:27610556 chr05:027610556 0 W/27610556-27610556 FN-349 Single Base Substitution C-T INTRON HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-377.SNP.5:27628732 chr05:027628732 0 W/27628732-27628732 FN-377 Single Base Substitution G-A INTRON HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-377.SNP.5:27628733 chr05:027628733 0 W/27628733-27628733 FN-377 Single Base Substitution G-A INTRON HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1630-S.SNP.5:27633305 chr05:027633305 0 W/27633305-27633305 FN1630-S Single Base Substitution C-T INTRON HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3889-S.SNP.5:27634735 chr05:027634735 0 W/27634735-27634735 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.587264;DP=2294;DP4=1099,1121,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.40095e-09;MQSB=0.964661;RPB=0.678594;SGB=44.1818;VDB=0.0386424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M1864I|2188|LOC_Os05g48200|protein_coding|CODING|LOC_Os05g48200.1|19|1) FN454-S.SNP.5:27637553 chr05:027637553 0 W/27637553-27637553 FN454-S Single Base Substitution C-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN585-S.SNP.5:27655856 chr05:027655856 0 W/27655856-27655856 FN585-S Single Base Substitution C-A INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN3788-S.SNP.5:27657840 chr05:027657840 0 W/27657840-27657840 FN3788-S SNP T -> A AC=1;AN=190;BQB=0.566921;DP=2869;DP4=1145,1519,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.70522e-06;MQSB=0.985912;RPB=0.928103;SGB=-17.653;VDB=0.0588422;EFF=INTRON(MODIFIER||||74|LOC_Os05g48250|protein_coding|CODING|LOC_Os05g48250.1|1|1) FN666-S.SNP.5:27658636 chr05:027658636 0 W/27658636-27658636 FN666-S Single Base Substitution G-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3810-S.SNP.5:27666368 chr05:027666368 0 W/27666368-27666368 FN3810-S SNP G -> A AC=2;AN=190;BQB=0.989959;DP=2846;DP4=1528,1181,18,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.42868e-15;MQSB=0.975408;RPB=0.891358;SGB=96.5165;VDB=0.23858;EFF=UTR_5_PRIME(MODIFIER||94||369|LOC_Os05g48270|protein_coding|CODING|LOC_Os05g48270.1|1|1) FN2140-S.SNP.5:27667835 chr05:027667835 0 W/27667835-27667835 FN2140-S SNP A -> G AC=1;AN=168;BQB=0.751044;DP=3677;DP4=1799,1830,20,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.10792e-19;MQSB=0.990106;RPB=0.220225;SGB=-8.47945;VDB=0.78283;EFF=INTRON(MODIFIER||||369|LOC_Os05g48270|protein_coding|CODING|LOC_Os05g48270.1|2|1) FN1252-S.SNP.5:27674001 chr05:027674001 0 W/27674001-27674001 FN1252-S Single Base Substitution C-T INTRON HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3981-S.SNP.5:27701773 chr05:027701773 0 W/27701773-27701773 FN3981-S SNP C -> T AC=1;AN=168;BQB=0.929993;DP=2532;DP4=1104,1299,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.88991e-07;MQSB=0.176841;RPB=0.299699;SGB=47.7421;VDB=0.242177;EFF=UTR_3_PRIME(MODIFIER||167||92|LOC_Os05g48320|protein_coding|CODING|LOC_Os05g48320.1|5|1) FN3834-S.SNP.5:27715090 chr05:027715090 0 W/27715090-27715090 FN3834-S SNP A -> G AC=2;AN=190;BQB=0.925363;DP=2391;DP4=1074,1183,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.04016e-12;MQSB=0.85184;RPB=0.913879;SGB=108.296;VDB=0.0928911;EFF=INTRON(MODIFIER||||526|LOC_Os05g48340|protein_coding|CODING|LOC_Os05g48340.1|8|1),INTRON(MODIFIER||||500|LOC_Os05g48340|protein_coding|CODING|LOC_Os05g48340.2|8|1),INTRON(MODIFIER||||482|LOC_Os05g48340|protein_coding|CODING|LOC_Os05g48340.3|8|1) FN_809-6-1.SNP.5:27719417 chr05:027719417 0 W/27719417-27719417 FN_809-6-1 Single Base Substitution G-A Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN1065-S.SNP.5:27726670 chr05:027726670 0 W/27726670-27726670 FN1065-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g48360 membrane attack complex component/perforin/complement C9, putative, expressed SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN-349.SNP.5:27732434 chr05:027732434 0 W/27732434-27732434 FN-349 Single Base Substitution G-A INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2544-S.SNP.5:27733949 chr05:027733949 0 W/27733949-27733949 FN2544-S SNP G -> T AC=1;AN=198;BQB=0.985683;DP=4170;DP4=1856,2078,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.80778e-16;MQSB=0.835801;RPB=0.996501;SGB=50.1053;VDB=0.63785;EFF=UTR_3_PRIME(MODIFIER||302||509|LOC_Os05g48380|protein_coding|CODING|LOC_Os05g48380.1|8|1) FN926-S.SNP.5:27733949 chr05:027733949 0 W/27733949-27733949 FN926-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-375.SNP.5:27734824 chr05:027734824 0 W/27734824-27734824 FN-375 Single Base Substitution G-C INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN4133-S.SNP.5:27737280 chr05:027737280 0 W/27737280-27737280 FN4133-S SNP C -> T AC=2;AN=182;BQB=0.978207;DP=2686;DP4=1322,1300,13,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.3633e-13;MQSB=0.999991;RPB=0.846394;SGB=98.2417;VDB=0.546556;EFF=INTRON(MODIFIER||||509|LOC_Os05g48380|protein_coding|CODING|LOC_Os05g48380.1|2|1) FN3825-S.SNP.5:27771221 chr05:027771221 0 W/27771221-27771221 FN3825-S SNP C -> A AC=1;AN=190;BQB=0.641999;DP=2609;DP4=1281,1093,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000316631;MQSB=0.294211;RPB=0.427585;SGB=25.439;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.5:27777300 chr05:027777300 0 W/27777300-27777300 FN621-S Single Base Substitution A-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3803-S.SNP.5:27781934 chr05:027781934 0 W/27781934-27781934 FN3803-S SNP G -> C AC=1;AN=190;BQB=0.893356;DP=2334;DP4=1014,1243,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00128535;MQB=0.0148823;MQSB=0.717244;RPB=0.9393;SGB=78.7471;VDB=0.449763;EFF=INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.1|7|1),INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.2|8|1),INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.3|6|1),INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.4|7|1),INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.5|7|1),INTRON(MODIFIER||||409|LOC_Os05g48450|protein_coding|CODING|LOC_Os05g48450.6|7|1) FN1625-S.SNP.5:27786373 chr05:027786373 0 W/27786373-27786373 FN1625-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.5:27786373 chr05:027786373 0 W/27786373-27786373 FN1626-S SNP C -> G AC=1;AN=188;BQB=0.837256;DP=3342;DP4=1440,1852,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.0173415;MQSB=0;RPB=0.996538;SGB=-38.278;VDB=0.605821;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S117|216|LOC_Os05g48470|protein_coding|CODING|LOC_Os05g48470.1|6|1) FN2665-S.SNP.5:27801535 chr05:027801535 0 W/27801535-27801535 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.933283;DP=4588;DP4=2300,2096,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.21358e-13;MQSB=0.733185;RPB=0.838059;SGB=61.9006;VDB=0.234726;EFF=INTRON(MODIFIER||||596|LOC_Os05g48510|protein_coding|CODING|LOC_Os05g48510.1|3|1),INTRON(MODIFIER||||498|LOC_Os05g48510|protein_coding|CODING|LOC_Os05g48510.2|3|1) FN3667-S.SNP.5:27804957 chr05:027804957 0 W/27804957-27804957 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.993233;DP=3011;DP4=1472,1434,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07514e-05;MQSB=0.976841;RPB=0.216513;SGB=26.3271;VDB=0.196869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T393I|596|LOC_Os05g48510|protein_coding|CODING|LOC_Os05g48510.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T295I|498|LOC_Os05g48510|protein_coding|CODING|LOC_Os05g48510.2|13|1) FN2617-S.SNP.5:27822397 chr05:027822397 0 W/27822397-27822397 FN2617-S SNP G -> A AC=2;AN=198;BQB=0.991436;DP=4254;DP4=2147,1877,32,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.97997e-25;MQSB=0.989249;RPB=0.994648;SGB=228.759;VDB=0.425156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.5:27823278 chr05:027823278 0 W/27823278-27823278 FN1115-S Single Base Substitution C-T INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN4182-S.SNP.5:27823278 chr05:027823278 0 W/27823278-27823278 FN4182-S SNP C -> T AC=1;AN=170;BQB=0.0933807;DP=1908;DP4=1094,772,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.0274505;MQSB=0.803764;RPB=0.923715;SGB=21.1076;VDB=0.730881;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.5:27824113 chr05:027824113 0 W/27824113-27824113 FN467-S Single Base Substitution T-A INTRON HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3487-S.SNP.5:27836551 chr05:027836551 0 W/27836551-27836551 FN3487-S SNP C -> T AC=2;AN=184;BQB=0.998408;DP=2227;DP4=909,1238,11,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.21891e-16;MQSB=0.85487;RPB=0.78414;SGB=116.569;VDB=0.0455203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.5:27836553 chr05:027836553 0 W/27836553-27836553 FN3487-S SNP C -> T AC=2;AN=184;BQB=0.940796;DP=2257;DP4=935,1245,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46791e-15;MQSB=0.877556;RPB=0.987529;SGB=81.5311;VDB=0.0234244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.5:27852259 chr05:027852259 0 W/27852259-27852259 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.920941;DP=2992;DP4=1465,1432,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30077e-05;MQSB=0.408119;RPB=0.0999783;SGB=21.6609;VDB=0.067912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.5:27854484 chr05:027854484 0 W/27854484-27854484 FN3764-S SNP C -> T AC=2;AN=190;BQB=0.837665;DP=1915;DP4=495,1313,2,10;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00365535;MQB=0.0127601;MQSB=2.75337e-20;RPB=0.809112;SGB=49.0954;VDB=0.0993177;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.5:27855170 chr05:027855170 0 W/27855170-27855170 FN1618-S Single Base Substitution G-C INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2640-S.SNP.5:27856343 chr05:027856343 0 W/27856343-27856343 FN2640-S SNP G -> T AC=1;AN=200;BQB=0.461587;DP=4714;DP4=2249,2207,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.75311e-13;MQSB=0.910532;RPB=0.447432;SGB=61.9006;VDB=0.308216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.5:27860890 chr05:027860890 0 W/27860890-27860890 FN1443-S Single Base Substitution T-G INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3509-S.SNP.5:27864094 chr05:027864094 0 W/27864094-27864094 FN3509-S SNP G -> T AC=1;AN=188;BQB=0.952604;DP=2943;DP4=1575,1280,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.38853e-12;MQSB=0.978425;RPB=0.561019;SGB=41.3359;VDB=0.775332;EFF=INTRON(MODIFIER||||451|LOC_Os05g48600|protein_coding|CODING|LOC_Os05g48600.1|3|1),INTRON(MODIFIER||||412|LOC_Os05g48600|protein_coding|CODING|LOC_Os05g48600.2|4|1) FN2685-S.SNP.5:27868291 chr05:027868291 0 W/27868291-27868291 FN2685-S SNP A -> G AC=1;AN=200;BQB=0.989889;DP=4750;DP4=2295,2255,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05962e-08;MQSB=0.289004;RPB=0.416036;SGB=43.8747;VDB=0.374464;EFF=UTR_3_PRIME(MODIFIER||57||164|LOC_Os05g48610|protein_coding|CODING|LOC_Os05g48610.1|1|1) FN1257-S.SNP.5:27870687 chr05:027870687 0 W/27870687-27870687 FN1257-S Single Base Substitution A-C INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2118-S.SNP.5:27872508 chr05:027872508 0 W/27872508-27872508 FN2118-S SNP C -> T AC=1;AN=168;BQB=0.82382;DP=4258;DP4=2149,2033,13,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.59922e-17;MQSB=1;RPB=0.31633;SGB=89.641;VDB=0.557551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A614T|1032|LOC_Os05g48620|protein_coding|CODING|LOC_Os05g48620.1|8|1) FN2572-S.SNP.5:27872646 chr05:027872646 0 W/27872646-27872646 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.879821;DP=4222;DP4=1897,2083,13,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23142e-19;MQSB=0.69914;RPB=0.907096;SGB=141.451;VDB=0.045332;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E568K|1032|LOC_Os05g48620|protein_coding|CODING|LOC_Os05g48620.1|8|1) FN347-S.SNP.5:27873475 chr05:027873475 0 W/27873475-27873475 FN347-S Single Base Substitution C-A INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3375-S.SNP.5:27877184 chr05:027877184 0 W/27877184-27877184 FN3375-S SNP T -> C AC=1;AN=184;BQB=0.528837;DP=2806;DP4=1371,1180,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.38776e-07;MQSB=0.95468;RPB=0.976683;SGB=-84.2195;VDB=0.96392;EFF=UTR_5_PRIME(MODIFIER||103||1032|LOC_Os05g48620|protein_coding|CODING|LOC_Os05g48620.1|1|1) FN1429-S.SNP.5:27888683 chr05:027888683 0 W/27888683-27888683 FN1429-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g48660 MRH1, putative, expressed SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN2687-S.SNP.5:27889063 chr05:027889063 0 W/27889063-27889063 FN2687-S SNP T -> G AC=2;AN=200;BQB=0.91973;DP=4892;DP4=2464,2199,11,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.54763e-16;MQSB=0.999808;RPB=0.945174;SGB=109.527;VDB=0.56802;EFF=SPLICE_SITE_REGION(LOW||||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.1|1|1),SPLICE_SITE_REGION(LOW||||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.2|1|1),UTR_5_PRIME(MODIFIER||226||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.1|1|1),UTR_5_PRIME(MODIFIER||226||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.2|1|1) FN4119-S.SNP.5:27889246 chr05:027889246 0 W/27889246-27889246 FN4119-S SNP T -> C AC=1;AN=182;BQB=0.894992;DP=3059;DP4=1439,1412,3,9;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.00105068;MQSB=0.755999;RPB=0.780832;SGB=15.6115;VDB=0.885039;EFF=UTR_5_PRIME(MODIFIER||409||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.1|1|1),UTR_5_PRIME(MODIFIER||409||454|LOC_Os05g48660|protein_coding|CODING|LOC_Os05g48660.2|1|1) FN3530-S.SNP.5:27891801 chr05:027891801 0 W/27891801-27891801 FN3530-S SNP C -> T AC=2;AN=188;BQB=0.979738;DP=3032;DP4=1434,1517,15,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.2903e-19;MQSB=0.906233;RPB=0.566729;SGB=148.931;VDB=0.0695705;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.5:27909378 chr05:027909378 0 W/27909378-27909378 FN-339 Single Base Substitution A-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN2220-S.SNP.5:27910689 chr05:027910689 0 W/27910689-27910689 FN2220-S SNP T -> C AC=2;AN=190;BQB=0.0419441;DP=5370;DP4=2305,2711,31,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.34731e-33;MQSB=0.748892;RPB=0.00841123;SGB=235.118;VDB=0.937425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.5:27914075 chr05:027914075 0 W/27914075-27914075 FN1215-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN-200.SNP.5:27915055 chr05:027915055 0 W/27915055-27915055 FN-200 Single Base Substitution C-T INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN1561-S.SNP.5:27923625 chr05:027923625 0 W/27923625-27923625 FN1561-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os05g48710 expressed protein SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2634-S.SNP.5:27925977 chr05:027925977 0 W/27925977-27925977 FN2634-S SNP C -> T AC=2;AN=200;BQB=0.943617;DP=5042;DP4=2475,2283,29,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000198334;MQB=9.13908e-27;MQSB=0.972174;RPB=0.637358;SGB=125.876;VDB=0.915459;EFF=INTRON(MODIFIER||||492|LOC_Os05g48720|protein_coding|CODING|LOC_Os05g48720.1|1|1) FN400-S.SNP.5:27931406 chr05:027931406 0 W/27931406-27931406 FN400-S Single Base Substitution G-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1124-S.SNP.5:27932748 chr05:027932748 0 W/27932748-27932748 FN1124-S Single Base Substitution G-A INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2434.SNP.5:27934434 chr05:027934434 0 W/27934434-27934434 FN2434 SNP G -> T AC=1;AN=200;BQB=0.0224375;DP=4563;DP4=2137,2194,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00928027;MQSB=0.961486;RPB=0.884035;SGB=25.849;VDB=0.972931;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.5:27940643 chr05:027940643 0 W/27940643-27940643 FN2795-S SNP T -> C AC=1;AN=198;BQB=0.517498;DP=4448;DP4=2056,2221,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.00671e-13;MQSB=0.996773;RPB=0.903858;SGB=90.9049;VDB=0.45731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.5:27942624 chr05:027942624 0 W/27942624-27942624 FN2544-S SNP C -> T AC=1;AN=198;BQB=0.957159;DP=4122;DP4=2060,1868,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.49591e-13;MQSB=0.966541;RPB=0.89345;SGB=65.3149;VDB=0.519244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.5:27945184 chr05:027945184 0 W/27945184-27945184 FN2739-S SNP T -> G AC=1;AN=200;BQB=0.96809;DP=5021;DP4=2615,2217,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.43643e-15;MQSB=0.948299;RPB=0.522548;SGB=79.9264;VDB=0.33149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V46G|518|LOC_Os05g48760|protein_coding|CODING|LOC_Os05g48760.1|2|1) FN1221-S.SNP.5:27954726 chr05:027954726 0 W/27954726-27954726 FN1221-S Single Base Substitution T-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2634-S.SNP.5:27961482 chr05:027961482 0 W/27961482-27961482 FN2634-S SNP G -> A AC=1;AN=200;BQB=0.999766;DP=4732;DP4=2295,2115,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74074e-19;MQSB=0.998461;RPB=0.698527;SGB=65.9573;VDB=0.356117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S165L|507|LOC_Os05g48790|protein_coding|CODING|LOC_Os05g48790.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S108L|454|LOC_Os05g48790|protein_coding|CODING|LOC_Os05g48790.2|2|1) FN898-S.SNP.5:27972000 chr05:027972000 0 W/27972000-27972000 FN898-S Single Base Substitution C-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3880-S.SNP.5:27973918 chr05:027973918 0 W/27973918-27973918 FN3880-S SNP C -> A AC=1;AN=158;BQB=0.996565;DP=2750;DP4=1323,1315,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.06539e-08;MQSB=0.459541;RPB=0.23911;SGB=64.5449;VDB=0.443267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G138V|362|LOC_Os05g48810|protein_coding|CODING|LOC_Os05g48810.1|2|1) FN540-S.SNP.5:27980629 chr05:027980629 0 W/27980629-27980629 FN540-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN3398-S.SNP.5:27983619 chr05:027983619 0 W/27983619-27983619 FN3398-S SNP C -> A AC=2;AN=184;BQB=0.998758;DP=2662;DP4=1120,1425,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.54442e-13;MQSB=0.898818;RPB=0.872236;SGB=84.9167;VDB=0.645557;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1855|LOC_Os05g48820|protein_coding|CODING|LOC_Os05g48820.1|7|1),INTRON(MODIFIER||||1855|LOC_Os05g48820|protein_coding|CODING|LOC_Os05g48820.1|6|1);LOF=(LOC_Os05g48820|LOC_Os05g48820|1|1.00) W554-1-1.SNP.5:27986881 chr05:027986881 0 W/27986881-27986881 W554-1-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3297-S.SNP.5:27987526 chr05:027987526 0 W/27987526-27987526 FN3297-S SNP C -> T AC=2;AN=184;BQB=0.731771;DP=3525;DP4=1770,1594,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.621e-12;MQSB=0.750911;RPB=0.170475;SGB=56.0583;VDB=0.297611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.5:27988691 chr05:027988691 0 W/27988691-27988691 FN2600-S SNP T -> C AC=1;AN=198;BQB=0.472456;DP=4207;DP4=2032,1975,19,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.49421e-14;MQSB=0.242974;RPB=0.92804;SGB=63.0809;VDB=0.0240916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.5:27989576 chr05:027989576 0 W/27989576-27989576 FN2579-S SNP G -> T AC=1;AN=198;BQB=0.710543;DP=3797;DP4=1794,1810,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.2881e-05;MQSB=3.79573e-10;RPB=0.708076;SGB=-14.4309;VDB=0.172461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-41.SNP.5:28009513 chr05:028009513 0 W/28009513-28009513 FN-41 Single Base Substitution G-T UTR_3_PRIME Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN851-S.SNP.5:28019004 chr05:028019004 0 W/28019004-28019004 FN851-S Single Base Substitution A-G INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN-22.SNP.5:28027874 chr05:028027874 0 W/28027874-28027874 FN-22 Single Base Substitution C-A INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3795-S.SNP.5:28030717 chr05:028030717 0 W/28030717-28030717 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.400236;DP=2649;DP4=1347,1214,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000392421;MQSB=0.997493;RPB=0.431951;SGB=28.9929;VDB=0.547427;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.5:28030717 chr05:028030717 0 W/28030717-28030717 FN4077-S SNP G -> A AC=2;AN=182;BQB=0.991113;DP=2869;DP4=1366,1409,9,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.50482e-11;MQSB=0.998507;RPB=0.969637;SGB=84.7091;VDB=0.679639;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.5:28030717 chr05:028030717 0 W/28030717-28030717 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.374885;DP=2434;DP4=1216,1129,14,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.58147e-14;MQSB=0.999971;RPB=0.914417;SGB=18.759;VDB=0.638734;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.5:28034888 chr05:028034888 0 W/28034888-28034888 FN449-S Single Base Substitution G-T SPLICE_SITE_DONOR HET LOC_Os05g48870 auxin response factor 15, putative, expressed SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1573-S.SNP.5:28037530 chr05:028037530 0 W/28037530-28037530 FN1573-S Single Base Substitution T-C INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2313.SNP.5:28039638 chr05:028039638 0 W/28039638-28039638 FN2313 SNP A -> G AC=1;AN=192;BQB=0.140533;DP=5187;DP4=2440,2425,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.89145e-10;MQSB=0.995681;RPB=0.777641;SGB=-38.813;VDB=0.531749;EFF=UTR_3_PRIME(MODIFIER||464||296|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.8|2|1),UTR_3_PRIME(MODIFIER||341||313|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.6|4|1),UTR_3_PRIME(MODIFIER||369||294|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.9|4|1),UTR_3_PRIME(MODIFIER||341||712|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.1|12|1),UTR_3_PRIME(MODIFIER||341||313|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.5|4|1),UTR_3_PRIME(MODIFIER||464||296|LOC_Os05g48870|protein_coding|CODING|LOC_Os05g48870.7|3|1) FN467-S.SNP.5:28040367 chr05:028040367 0 W/28040367-28040367 FN467-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN467-S.SNP.5:28040373 chr05:028040373 0 W/28040373-28040373 FN467-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1513-S.SNP.5:28042453 chr05:028042453 0 W/28042453-28042453 FN1513-S Single Base Substitution G-T SPLICE_SITE_REGION HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN_N1-130-1.SNP.5:28043025 chr05:028043025 0 W/28043025-28043025 FN_N1-130-1 Single Base Substitution G-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN389-S.SNP.5:28043579 chr05:028043579 0 W/28043579-28043579 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN779-S.SNP.5:28060836 chr05:028060836 0 W/28060836-28060836 FN779-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g48910 retrotransposon protein, putative, unclassified SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3376-S.SNP.5:28065678 chr05:028065678 0 W/28065678-28065678 FN3376-S SNP T -> C AC=1;AN=184;BQB=0.931646;DP=2126;DP4=767,1218,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.00684e-11;MQSB=0.0235915;RPB=0.0275276;SGB=74.4875;VDB=0.103993;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.5:28069496 chr05:028069496 0 W/28069496-28069496 FN-163 Single Base Substitution T-C INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN1533-S.SNP.5:28070760 chr05:028070760 0 W/28070760-28070760 FN1533-S Single Base Substitution A-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1464-S.SNP.5:28074112 chr05:028074112 0 W/28074112-28074112 FN1464-S Single Base Substitution C-A INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3801-S.SNP.5:28074747 chr05:028074747 0 W/28074747-28074747 FN3801-S SNP G -> A AC=1;AN=190;BQB=0.948203;DP=2907;DP4=1197,1632,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.21819e-10;MQSB=0.989699;RPB=0.80536;SGB=23.6597;VDB=0.291385;EFF=INTRON(MODIFIER||||426|LOC_Os05g48940|protein_coding|CODING|LOC_Os05g48940.1|3|1) FN2553-S.SNP.5:28077040 chr05:028077040 0 W/28077040-28077040 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.23607;DP=4549;DP4=1968,2270,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.00233e-12;MQSB=0.947762;RPB=0.230869;SGB=47.5102;VDB=0.135661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.5:28077225 chr05:028077225 0 W/28077225-28077225 FN2407 SNP T -> G AC=2;AN=200;BQB=0.965124;DP=5142;DP4=2133,2653,17,24;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=5.16078e-16;MQSB=1.73557e-06;RPB=0.463456;SGB=183.209;VDB=0.0422146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.5:28088787 chr05:028088787 0 W/28088787-28088787 FN3459-S SNP G -> A AC=2;AN=184;BQB=0.602271;DP=2762;DP4=1395,1284,8,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.35471e-12;MQSB=0.977758;RPB=0.934629;SGB=89.4385;VDB=0.674203;EFF=INTRON(MODIFIER||||500|LOC_Os05g48970|protein_coding|CODING|LOC_Os05g48970.1|1|1),INTRON(MODIFIER||||379|LOC_Os05g48970|protein_coding|CODING|LOC_Os05g48970.2|1|1) FN2376.SNP.5:28089756 chr05:028089756 0 W/28089756-28089756 FN2376 SNP A -> T AC=2;AN=192;BQB=0.897201;DP=5032;DP4=2219,2374,24,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000198728;MQB=3.98133e-23;MQSB=0.967867;RPB=0.811145;SGB=-93.2139;VDB=0.481757;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N130Y|500|LOC_Os05g48970|protein_coding|CODING|LOC_Os05g48970.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A76|379|LOC_Os05g48970|protein_coding|CODING|LOC_Os05g48970.2|2|1) FN-205.SNP.5:28092760 chr05:028092760 0 W/28092760-28092760 FN-205 Single Base Substitution A-G INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-206.SNP.5:28092820 chr05:028092820 0 W/28092820-28092820 FN-206 Single Base Substitution G-A INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3447-S.SNP.5:28099774 chr05:028099774 0 W/28099774-28099774 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.76576;DP=2534;DP4=1265,1169,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000160549;MQSB=0.997678;RPB=0.929906;SGB=39.699;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.5:28101132 chr05:028101132 0 W/28101132-28101132 FN403-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN930-S.SNP.5:28102233 chr05:028102233 0 W/28102233-28102233 FN930-S Single Base Substitution G-C INTRON HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2192-S.SNP.5:28103351 chr05:028103351 0 W/28103351-28103351 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.838867;DP=5189;DP4=2385,2492,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.09152e-09;MQSB=0.936207;RPB=0.762789;SGB=21.1058;VDB=0.219351;EFF=INTRON(MODIFIER||||515|LOC_Os05g48990|protein_coding|CODING|LOC_Os05g48990.1|2|1) FN3520-S.SNP.5:28107441 chr05:028107441 0 W/28107441-28107441 FN3520-S SNP C -> T AC=1;AN=188;BQB=0.999218;DP=3119;DP4=1500,1500,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.10122e-08;MQSB=0.991563;RPB=0.947127;SGB=62.6088;VDB=0.944964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R51W|295|LOC_Os05g49000|protein_coding|CODING|LOC_Os05g49000.1|1|1) FN-105.SNP.5:28112135 chr05:028112135 0 W/28112135-28112135 FN-105 Single Base Substitution T-C INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN1022-S.SNP.5:28115451 chr05:028115451 0 W/28115451-28115451 FN1022-S Single Base Substitution C-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2719-S.SNP.5:28116333 chr05:028116333 0 W/28116333-28116333 FN2719-S SNP T -> C AC=2;AN=200;BQB=0.636183;DP=4920;DP4=2125,2500,19,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.13231e-26;MQSB=0.121752;RPB=0.224295;SGB=112.85;VDB=0.822263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.5:28116512 chr05:028116512 0 W/28116512-28116512 FN1617-S Single Base Substitution C-A INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN-13.SNP.5:28117991 chr05:028117991 0 W/28117991-28117991 FN-13 Single Base Substitution C-T INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-83.SNP.5:28121022 chr05:028121022 0 W/28121022-28121022 FN-83 Single Base Substitution A-G INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN2734-S.SNP.5:28121687 chr05:028121687 0 W/28121687-28121687 FN2734-S SNP C -> A AC=1;AN=200;BQB=0.982665;DP=5126;DP4=2543,2333,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32792e-11;MQSB=0.78725;RPB=0.218779;SGB=54.6902;VDB=0.174188;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.5:28134174 chr05:028134174 0 W/28134174-28134174 FN417-S Single Base Substitution G-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2638-S.SNP.5:28134266 chr05:028134266 0 W/28134266-28134266 FN2638-S SNP G -> A AC=2;AN=200;BQB=0.757755;DP=4775;DP4=2347,2136,15,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.54237e-19;MQSB=0.147198;RPB=0.0469291;SGB=76.378;VDB=0.450699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.5:28134925 chr05:028134925 0 W/28134925-28134925 FN1221-S Single Base Substitution T-C INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN_826-4-1.SNP.5:28141946 chr05:028141946 0 W/28141946-28141946 FN_826-4-1 Single Base Substitution G-T Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN-361.SNP.5:28149306 chr05:028149306 0 W/28149306-28149306 FN-361 Single Base Substitution C-G INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN2782-S.SNP.5:28160403 chr05:028160403 0 W/28160403-28160403 FN2782-S SNP G -> T AC=1;AN=198;BQB=0.952346;DP=3824;DP4=1997,1658,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.34898e-10;MQSB=0.984528;RPB=0.93772;SGB=77.1196;VDB=0.354859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.5:28162447 chr05:028162447 0 W/28162447-28162447 FN2261-S SNP T -> A AC=2;AN=190;BQB=0.693073;DP=5418;DP4=2636,2455,49,48;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00018457;MQB=0;MQSB=0.996952;RPB=0.895074;SGB=377.586;VDB=0.118344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.5:28163045 chr05:028163045 0 W/28163045-28163045 FN3795-S SNP C -> T AC=1;AN=190;BQB=0.998214;DP=2914;DP4=1332,1481,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94218e-08;MQSB=0.82149;RPB=0.45412;SGB=53.6492;VDB=0.216243;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-S.SNP.5:28164927 chr05:028164927 0 W/28164927-28164927 FN75-S-S SNP G -> A AC=1;AN=190;BQB=0.430065;DP=5202;DP4=2485,2254,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00134564;MQB=5.55293e-09;MQSB=0.941821;RPB=0.991306;SGB=14.9883;VDB=0.835993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1230S|1286|LOC_Os05g49110|protein_coding|CODING|LOC_Os05g49110.1|3|1) FN2639-S.SNP.5:28165901 chr05:028165901 0 W/28165901-28165901 FN2639-S SNP G -> T AC=1;AN=200;BQB=0.709993;DP=5071;DP4=2205,2601,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000591599;MQB=4.72174e-17;MQSB=0.991915;RPB=0.0969987;SGB=97.9523;VDB=0.169534;EFF=INTRON(MODIFIER||||1286|LOC_Os05g49110|protein_coding|CODING|LOC_Os05g49110.1|2|1) FN929-S.SNP.5:28172933 chr05:028172933 0 W/28172933-28172933 FN929-S Single Base Substitution T-C INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN3630-S.SNP.5:28181181 chr05:028181181 0 W/28181181-28181181 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.984349;DP=2949;DP4=1415,1428,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70698e-07;MQSB=0.917515;RPB=0.867475;SGB=28.9929;VDB=0.489965;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V368|430|LOC_Os05g49120|protein_coding|CODING|LOC_Os05g49120.1|6|1),UTR_3_PRIME(MODIFIER||32||318|LOC_Os05g49120|protein_coding|CODING|LOC_Os05g49120.2|7|1) FN3694-S.SNP.5:28189520 chr05:028189520 0 W/28189520-28189520 FN3694-S SNP A -> C AC=1;AN=190;BQB=0.9005;DP=2891;DP4=1306,1456,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63746e-08;MQSB=0.967421;RPB=0.618116;SGB=53.6492;VDB=0.288355;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcG|S537|592|LOC_Os05g49140|protein_coding|CODING|LOC_Os05g49140.1|10|1),SYNONYMOUS_CODING(LOW|SILENT|tcT/tcG|S514|569|LOC_Os05g49140|protein_coding|CODING|LOC_Os05g49140.2|9|1),UTR_3_PRIME(MODIFIER||332||459|LOC_Os05g49140|protein_coding|CODING|LOC_Os05g49140.3|9|1) FN951-S.SNP.5:28202319 chr05:028202319 0 W/28202319-28202319 FN951-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN537-S.SNP.5:28208981 chr05:028208981 0 W/28208981-28208981 FN537-S Single Base Substitution A-G INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN2261-S.SNP.5:28219216 chr05:028219216 0 W/28219216-28219216 FN2261-S SNP C -> T AC=1;AN=190;BQB=0.152788;DP=5463;DP4=2466,2498,22,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29802e-16;MQSB=0.982415;RPB=0.183888;SGB=100.276;VDB=0.610066;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.5:28227595 chr05:028227595 0 W/28227595-28227595 FN-13 Single Base Substitution C-A UTR_3_PRIME HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN2711-S.SNP.5:28235734 chr05:028235734 0 W/28235734-28235734 FN2711-S SNP T -> C AC=1;AN=200;BQB=0.534093;DP=4848;DP4=2481,2179,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0782e-11;MQSB=0.986632;RPB=0.808547;SGB=72.6852;VDB=0.511604;EFF=INTRON(MODIFIER||||509|LOC_Os05g49200|protein_coding|CODING|LOC_Os05g49200.1|8|1),INTRON(MODIFIER||||509|LOC_Os05g49200|protein_coding|CODING|LOC_Os05g49200.2|7|1) FN-101.SNP.5:28248991 chr05:028248991 0 W/28248991-28248991 FN-101 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g49230 ribosomal RNA large subunit methyltransferase J, putative, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1543-S.SNP.5:28254699 chr05:028254699 0 W/28254699-28254699 FN1543-S Single Base Substitution C-A INTRON HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN2274-S.SNP.5:28255715 chr05:028255715 0 W/28255715-28255715 FN2274-S SNP G -> C AC=1;AN=190;BQB=0.945831;DP=5041;DP4=2415,2319,19,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198373;MQB=5.38278e-18;MQSB=0.87631;RPB=0.963854;SGB=67.0756;VDB=0.364988;EFF=UTR_3_PRIME(MODIFIER||129||290|LOC_Os05g49250|protein_coding|CODING|LOC_Os05g49250.1|1|1),INTRON(MODIFIER||||290|LOC_Os05g49250|protein_coding|CODING|LOC_Os05g49250.2|1|1) FN-191.SNP.5:28256208 chr05:028256208 0 W/28256208-28256208 FN-191 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os05g49250 hhH-GPD superfamily base excision DNA repair protein, putative, expressed SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3815-S.SNP.5:28263398 chr05:028263398 0 W/28263398-28263398 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.849554;DP=2811;DP4=1377,1352,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00177873;MQB=0.000296332;MQSB=0.256651;RPB=0.867499;SGB=18.3316;VDB=0.646494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.5:28274643 chr05:028274643 0 W/28274643-28274643 FN3864-S SNP G -> A AC=2;AN=158;BQB=0.964507;DP=2765;DP4=1226,1384,14,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.94825e-17;MQSB=0.996931;RPB=0.49147;SGB=104.832;VDB=0.259792;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.5:28275783 chr05:028275783 0 W/28275783-28275783 FN713-S Single Base Substitution C-A INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3746-S.SNP.5:28275823 chr05:028275823 0 W/28275823-28275823 FN3746-S SNP A -> G AC=2;AN=190;BQB=0.864957;DP=2806;DP4=1161,1493,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.31748e-10;MQSB=0.95307;RPB=0.934662;SGB=90.0802;VDB=0.586121;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.5:28282699 chr05:028282699 0 W/28282699-28282699 FN-169 Single Base Substitution G-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-173.SNP.5:28292848 chr05:028292848 0 W/28292848-28292848 FN-173 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g49300 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2575-S.SNP.5:28295344 chr05:028295344 0 W/28295344-28295344 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.754254;DP=4111;DP4=2122,1761,19,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14029e-17;MQSB=0.998606;RPB=0.999098;SGB=26.8957;VDB=0.260105;EFF=INTERGENIC(MODIFIER||||||||||1) FN840-S.SNP.5:28295563 chr05:028295563 0 W/28295563-28295563 FN840-S Single Base Substitution C-G INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN320-S.SNP.5:28302644 chr05:028302644 0 W/28302644-28302644 FN320-S Single Base Substitution A-G INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3549-S.SNP.5:28304653 chr05:028304653 0 W/28304653-28304653 FN3549-S SNP T -> C AC=1;AN=188;BQB=0.954712;DP=3555;DP4=1875,1423,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.06865e-09;MQSB=0.608888;RPB=0.338591;SGB=20.9896;VDB=0.943983;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W9R|168|LOC_Os05g49340|protein_coding|CODING|LOC_Os05g49340.1|1|1) FN901-S.SNP.5:28317162 chr05:028317162 0 W/28317162-28317162 FN901-S Single Base Substitution A-C INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN323-S.SNP.5:28334330 chr05:028334330 0 W/28334330-28334330 FN323-S Single Base Substitution G-A INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1638-S.SNP.5:28338780 chr05:028338780 0 W/28338780-28338780 FN1638-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g49420 transcription factor, putative, expressed SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3500-S.SNP.5:28348458 chr05:028348458 0 W/28348458-28348458 FN3500-S SNP G -> A AC=2;AN=188;BQB=0.991139;DP=2077;DP4=679,1238,4,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.51627e-10;MQSB=0.919466;RPB=0.847002;SGB=60.7873;VDB=0.248311;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.5:28350929 chr05:028350929 0 W/28350929-28350929 FN-356 Single Base Substitution G-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3343-S.SNP.5:28355080 chr05:028355080 0 W/28355080-28355080 FN3343-S SNP C -> T AC=2;AN=184;BQB=0.66987;DP=2664;DP4=1464,1084,21,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.45241e-17;MQSB=0.990929;RPB=0.962039;SGB=63.6237;VDB=0.566298;EFF=INTRON(MODIFIER||||522|LOC_Os05g49460|protein_coding|CODING|LOC_Os05g49460.1|5|1) FN1508-S.SNP.5:28359956 chr05:028359956 0 W/28359956-28359956 FN1508-S Single Base Substitution T-C INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1355-S.SNP.5:28359977 chr05:028359977 0 W/28359977-28359977 FN1355-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4074-S.SNP.5:28375227 chr05:028375227 0 W/28375227-28375227 FN4074-S SNP C -> T AC=2;AN=182;BQB=0.941794;DP=2998;DP4=1468,1436,11,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.40173e-17;MQSB=0.929276;RPB=0.883696;SGB=125.307;VDB=0.265104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.5:28376421 chr05:028376421 0 W/28376421-28376421 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.683686;DP=3602;DP4=1702,1603,20,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.12535e-17;MQSB=0.690223;RPB=0.194862;SGB=81.2467;VDB=0.387841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.5:28379862 chr05:028379862 0 W/28379862-28379862 FN2190-S SNP T -> A AC=1;AN=190;BQB=0.585375;DP=4503;DP4=2106,2003,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12387e-13;MQSB=0.553262;RPB=0.986058;SGB=56.8601;VDB=0.44026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.5:28391299 chr05:028391299 0 W/28391299-28391299 FN2435 SNP G -> T AC=2;AN=200;BQB=0.690576;DP=4870;DP4=2291,2298,36,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.14883e-30;MQSB=0.516148;RPB=0.62536;SGB=123.271;VDB=0.357936;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.5:28392055 chr05:028392055 0 W/28392055-28392055 FN518-S Single Base Substitution T-C INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN3287-S.SNP.5:28398560 chr05:028398560 0 W/28398560-28398560 FN3287-S SNP T -> A AC=1;AN=184;BQB=0.987487;DP=2671;DP4=1309,1265,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.83408e-07;MQSB=0.987624;RPB=0.952094;SGB=44.2207;VDB=0.895021;EFF=INTERGENIC(MODIFIER||||||||||1) FN4180-S.SNP.5:28400661 chr05:028400661 0 W/28400661-28400661 FN4180-S SNP T -> C AC=1;AN=170;BQB=0.998175;DP=2834;DP4=1455,1295,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.17469e-09;MQSB=0.996394;RPB=0.995168;SGB=65.6427;VDB=0.802788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.5:28402682 chr05:028402682 0 W/28402682-28402682 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.840123;DP=4740;DP4=2473,1936,20,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.41084e-21;MQSB=0.980117;RPB=0.852301;SGB=78.9831;VDB=0.255995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.5:28404322 chr05:028404322 0 W/28404322-28404322 FN2375 SNP C -> T AC=1;AN=192;BQB=0.482819;DP=4903;DP4=2328,2297,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203957;MQB=4.86097e-08;MQSB=0.965368;RPB=0.997028;SGB=34.0426;VDB=0.761374;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S211|2113|LOC_Os05g49540|protein_coding|CODING|LOC_Os05g49540.1|1|1) FN2255-S.SNP.5:28410625 chr05:028410625 0 W/28410625-28410625 FN2255-S SNP C -> T AC=1;AN=190;BQB=2.49627e-05;DP=4158;DP4=1767,2093,39,35;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.408129;MQB=4.32808e-07;MQSB=1.39102e-39;RPB=2.54294e-14;SGB=-1398.87;VDB=8.28855e-16;EFF=INTRON(MODIFIER||||2113|LOC_Os05g49540|protein_coding|CODING|LOC_Os05g49540.1|3|1) FN4108-S.SNP.5:28410625 chr05:028410625 0 W/28410625-28410625 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.117501;DP=3451;DP4=1569,1726,67,22;HOB=6.03792e-05;ICB=0.000121422;MQ=24;MQ0F=0.370038;MQB=1.75557e-11;MQSB=0;RPB=1.15368e-17;SGB=-2085.18;VDB=4.7273e-24;EFF=INTRON(MODIFIER||||2113|LOC_Os05g49540|protein_coding|CODING|LOC_Os05g49540.1|3|1) FN3866-S.SNP.5:28415488 chr05:028415488 0 W/28415488-28415488 FN3866-S SNP G -> A AC=1;AN=158;BQB=0.964848;DP=2516;DP4=1224,1191,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.47674e-09;MQSB=0.98674;RPB=0.841633;SGB=55.806;VDB=0.966128;EFF=INTRON(MODIFIER||||2113|LOC_Os05g49540|protein_coding|CODING|LOC_Os05g49540.1|5|1) FN2419.SNP.5:28426167 chr05:028426167 0 W/28426167-28426167 FN2419 SNP G -> A AC=2;AN=200;BQB=0.85956;DP=4366;DP4=1903,2130,26,25;HOB=0.0198;ICB=0.495051;MQ=25;MQ0F=0.125744;MQB=0.315158;MQSB=0;RPB=0.797985;SGB=173.661;VDB=0.0848392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R28H|1055|LOC_Os05g49560|protein_coding|CODING|LOC_Os05g49560.1|1|1) FN2108-S.SNP.5:28427660 chr05:028427660 0 W/28427660-28427660 FN2108-S SNP G -> A AC=2;AN=166;BQB=0.412311;DP=1618;DP4=785,765,9,7;HOB=0.0238061;ICB=0.494049;MQ=41;MQ0F=0.0123609;MQB=0.0560957;MQSB=0.499535;RPB=0.141553;SGB=24.6155;VDB=0.0276731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V381I|1055|LOC_Os05g49560|protein_coding|CODING|LOC_Os05g49560.1|3|1) FN2242-S.SNP.5:28428283 chr05:028428283 0 W/28428283-28428283 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.159521;DP=3637;DP4=1852,1499,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0349189;MQB=0.77319;MQSB=0.0900944;RPB=0.827659;SGB=90.0802;VDB=0.263659;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R588|1055|LOC_Os05g49560|protein_coding|CODING|LOC_Os05g49560.1|3|1) FN721-S.SNP.5:28432129 chr05:028432129 0 W/28432129-28432129 FN721-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2226-S.SNP.5:28434589 chr05:028434589 0 W/28434589-28434589 FN2226-S SNP G -> A AC=2;AN=190;BQB=0.987222;DP=3591;DP4=1876,1388,20,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00194932;MQB=6.53563e-13;MQSB=0.0615184;RPB=0.425465;SGB=25.8654;VDB=0.0163286;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S361|1492|LOC_Os05g49570|protein_coding|CODING|LOC_Os05g49570.1|2|1) FN1419-S.SNP.5:28435086 chr05:028435086 0 W/28435086-28435086 FN1419-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os05g49570 retrotransposon protein, putative, unclassified, expressed SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2387.SNP.5:28437627 chr05:028437627 0 W/28437627-28437627 FN2387 SNP G -> A AC=1;AN=192;BQB=0.581013;DP=5288;DP4=2278,2803,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0376324;MQB=0.469292;MQSB=4.91522e-29;RPB=0.562969;SGB=75.4235;VDB=0.326966;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.5:28452422 chr05:028452422 0 W/28452422-28452422 FN740-S Single Base Substitution A-G START_LOST HOMO LOC_Os05g49590 suppressor of phythchrome A, putative, expressed SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2492.SNP.5:28456346 chr05:028456346 0 W/28456346-28456346 FN2492 SNP A -> G AC=1;AN=200;BQB=0.684452;DP=5406;DP4=2823,2234,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04873e-10;MQSB=0.442482;RPB=0.999645;SGB=58.2954;VDB=0.268429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.5:28456541 chr05:028456541 0 W/28456541-28456541 FN1330-S Single Base Substitution G-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN704-S.SNP.5:28462886 chr05:028462886 0 W/28462886-28462886 FN704-S Single Base Substitution A-G INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2782-S.SNP.5:28472772 chr05:028472772 0 W/28472772-28472772 FN2782-S SNP C -> G AC=1;AN=198;BQB=0.965677;DP=4066;DP4=1936,1860,23,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.4069e-19;MQSB=0.90453;RPB=0.742885;SGB=73.4614;VDB=0.74169;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S229C|277|LOC_Os05g49620|protein_coding|CODING|LOC_Os05g49620.1|3|1) FN-32.SNP.5:28472777 chr05:028472777 0 W/28472777-28472777 FN-32 Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os05g49620 WRKY19, expressed SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN3443-S.SNP.5:28477193 chr05:028477193 0 W/28477193-28477193 FN3443-S SNP C -> T AC=1;AN=184;BQB=0.997462;DP=3227;DP4=1230,1837,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=8.24846e-09;MQSB=1.43549e-05;RPB=0.912208;SGB=49.835;VDB=0.963001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.5:28477820 chr05:028477820 0 W/28477820-28477820 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-377.SNP.5:28477988 chr05:028477988 0 W/28477988-28477988 FN-377 Single Base Substitution T-A INTERGENIC HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1002-S.SNP.5:28480857 chr05:028480857 0 W/28480857-28480857 FN1002-S Single Base Substitution T-A INTERGENIC HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1422-S.SNP.5:28483827 chr05:028483827 0 W/28483827-28483827 FN1422-S Single Base Substitution C-T INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1638-S.SNP.5:28484830 chr05:028484830 0 W/28484830-28484830 FN1638-S Single Base Substitution G-T INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3540-S.SNP.5:28489189 chr05:028489189 0 W/28489189-28489189 FN3540-S SNP T -> A AC=1;AN=188;BQB=0.9545;DP=2711;DP4=1550,1060,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.5925e-06;MQSB=0.993764;RPB=0.998132;SGB=32.441;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.5:28489190 chr05:028489190 0 W/28489190-28489190 FN4260-S SNP A -> T AC=1;AN=170;BQB=0.555774;DP=2473;DP4=1414,918,19,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000404367;MQB=2.83797e-15;MQSB=0.976971;RPB=0.948293;SGB=79.6325;VDB=0.0956347;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.5:28489190 chr05:028489190 0 W/28489190-28489190 FN959-S Single Base Substitution A-T INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2338.SNP.5:28489708 chr05:028489708 0 W/28489708-28489708 FN2338 SNP T -> G AC=2;AN=192;BQB=0.988692;DP=5171;DP4=2499,2438,19,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.32584e-22;MQSB=0.735071;RPB=0.458516;SGB=177.012;VDB=0.370643;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.5:28491639 chr05:028491639 0 W/28491639-28491639 W607-2-1 Single Base Substitution G-A INTRON HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1384-S.SNP.5:28496345 chr05:028496345 0 W/28496345-28496345 FN1384-S Single Base Substitution C-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1384-S.SNP.5:28496348 chr05:028496348 0 W/28496348-28496348 FN1384-S Single Base Substitution T-C INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2442.SNP.5:28502414 chr05:028502414 0 W/28502414-28502414 FN2442 SNP T -> A AC=1;AN=200;BQB=0.725912;DP=4465;DP4=2187,1882,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40646e-08;MQSB=0.879513;RPB=0.708808;SGB=-13.7154;VDB=0.959638;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.5:28503079 chr05:028503079 0 W/28503079-28503079 FN624-S Single Base Substitution T-A INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN937-S.SNP.5:28505821 chr05:028505821 0 W/28505821-28505821 FN937-S Single Base Substitution G-A INTRON HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN-339.SNP.5:28510664 chr05:028510664 0 W/28510664-28510664 FN-339 Single Base Substitution C-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN_546-3-1.SNP.5:28512038 chr05:028512038 0 W/28512038-28512038 FN_546-3-1 Single Base Substitution C-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2085-S.SNP.5:28513326 chr05:028513326 0 W/28513326-28513326 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.241937;DP=2128;DP4=1074,992,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10824e-05;MQSB=0.996479;RPB=0.831435;SGB=4.1907;VDB=0.159485;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.5:28531703 chr05:028531703 0 W/28531703-28531703 FN1065-S Single Base Substitution C-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2771-S.SNP.5:28539387 chr05:028539387 0 W/28539387-28539387 FN2771-S SNP C -> T AC=2;AN=198;BQB=0.985593;DP=2807;DP4=928,1639,5,16;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=2.2876e-08;MQSB=0.994344;RPB=0.762981;SGB=90.9049;VDB=0.422115;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.5:28547688 chr05:028547688 0 W/28547688-28547688 FN1415-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g49760 dehydrogenase, putative, expressed SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2423.SNP.5:28549259 chr05:028549259 0 W/28549259-28549259 FN2423 SNP T -> A AC=1;AN=200;BQB=0.52082;DP=4260;DP4=1984,2133,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06816e-07;MQSB=0.647517;RPB=0.572807;SGB=49.6594;VDB=0.200231;EFF=INTRON(MODIFIER||||412|LOC_Os05g49760|protein_coding|CODING|LOC_Os05g49760.1|7|1) FN2237-S.SNP.5:28552536 chr05:028552536 0 W/28552536-28552536 FN2237-S SNP A -> T AC=2;AN=190;BQB=3.64694e-08;DP=5233;DP4=2562,2367,7,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44627e-05;MQSB=0.914881;RPB=0.917761;SGB=39.6545;VDB=0.44694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D477E|608|LOC_Os05g49770|protein_coding|CODING|LOC_Os05g49770.1|18|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D477E|604|LOC_Os05g49770|protein_coding|CODING|LOC_Os05g49770.2|18|1) FN-264.SNP.5:28553148 chr05:028553148 0 W/28553148-28553148 FN-264 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN-264.SNP.5:28553155 chr05:028553155 0 W/28553155-28553155 FN-264 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g49770 CTP synthase, putative, expressed SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN2579-S.SNP.5:28555251 chr05:028555251 0 W/28555251-28555251 FN2579-S SNP G -> C AC=2;AN=198;BQB=0.340753;DP=4119;DP4=2190,1668,38,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.30755e-31;MQSB=0.904482;RPB=0.956454;SGB=225.851;VDB=0.211386;EFF=INTRON(MODIFIER||||608|LOC_Os05g49770|protein_coding|CODING|LOC_Os05g49770.1|3|1),INTRON(MODIFIER||||604|LOC_Os05g49770|protein_coding|CODING|LOC_Os05g49770.2|3|1) FN3794-S.SNP.5:28562612 chr05:028562612 0 W/28562612-28562612 FN3794-S SNP T -> A AC=2;AN=190;BQB=0.767139;DP=3031;DP4=1220,1662,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.51675e-17;MQSB=0.993517;RPB=0.0996782;SGB=100.07;VDB=0.933821;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.5:28563163 chr05:028563163 0 W/28563163-28563163 FN867-S Single Base Substitution T-C INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN944-S.SNP.5:28568831 chr05:028568831 0 W/28568831-28568831 FN944-S Single Base Substitution A-G INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2138-S.SNP.5:28568909 chr05:028568909 0 W/28568909-28568909 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.153956;DP=2727;DP4=1479,1206,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00458e-06;MQSB=0.912664;RPB=0.460348;SGB=-38.3665;VDB=0.54253;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.5:28594649 chr05:028594649 0 W/28594649-28594649 FN784-S Single Base Substitution G-A INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN1723-S.SNP.5:28600887 chr05:028600887 0 W/28600887-28600887 FN1723-S SNP T -> C AC=1;AN=188;BQB=0.0135605;DP=4127;DP4=2136,1946,16,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.12096e-11;MQSB=0.999781;RPB=0.874899;SGB=61.6823;VDB=0.624391;EFF=INTRON(MODIFIER||||407|LOC_Os05g49840|protein_coding|CODING|LOC_Os05g49840.1|1|1) FN-54.SNP.5:28602376 chr05:028602376 0 W/28602376-28602376 FN-54 Single Base Substitution G-T INTRON HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN3947-S.SNP.5:28602376 chr05:028602376 0 W/28602376-28602376 FN3947-S SNP G -> T AC=1;AN=168;BQB=0.670392;DP=2656;DP4=1111,1388,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.44434e-12;MQSB=0.852982;RPB=0.129672;SGB=75.9177;VDB=0.486462;EFF=INTRON(MODIFIER||||407|LOC_Os05g49840|protein_coding|CODING|LOC_Os05g49840.1|1|1) FN1256-S.SNP.5:28605534 chr05:028605534 0 W/28605534-28605534 FN1256-S Single Base Substitution G-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1749-S.SNP.5:28615259 chr05:028615259 0 W/28615259-28615259 FN1749-S SNP G -> A AC=1;AN=188;BQB=0.00641135;DP=3782;DP4=1941,1807,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67559e-07;MQSB=0.999268;RPB=0.433574;SGB=-61.9025;VDB=0.80389;EFF=INTRON(MODIFIER||||555|LOC_Os05g49870|protein_coding|CODING|LOC_Os05g49870.1|2|1) FN2651-S.SNP.5:28622033 chr05:028622033 0 W/28622033-28622033 FN2651-S SNP C -> A AC=1;AN=200;BQB=0.545614;DP=4685;DP4=2278,2134,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.17607e-16;MQSB=0.769635;RPB=0.627453;SGB=79.9264;VDB=0.0642873;EFF=INTERGENIC(MODIFIER||||||||||1) FN4146-S.SNP.5:28629621 chr05:028629621 0 W/28629621-28629621 FN4146-S SNP T -> G AC=1;AN=170;BQB=0.743854;DP=2593;DP4=1135,1316,13,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.94267e-10;MQSB=0.994267;RPB=0.980773;SGB=92.2986;VDB=0.781586;EFF=UTR_3_PRIME(MODIFIER||118||218|LOC_Os05g49910|protein_coding|CODING|LOC_Os05g49910.1|7|1),UTR_3_PRIME(MODIFIER||769||113|LOC_Os05g49910|protein_coding|CODING|LOC_Os05g49910.2|4|1),UTR_3_PRIME(MODIFIER||345||193|LOC_Os05g49910|protein_coding|CODING|LOC_Os05g49910.3|6|1) FN2608-S.SNP.5:28639847 chr05:028639847 0 W/28639847-28639847 FN2608-S SNP T -> C AC=2;AN=198;BQB=0.462091;DP=4258;DP4=1886,2105,11,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.57228e-10;MQSB=0.69466;RPB=0.781816;SGB=37.1297;VDB=0.970104;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.5:28654205 chr05:028654205 0 W/28654205-28654205 FN3515-S SNP T -> C AC=2;AN=188;BQB=0.95597;DP=2858;DP4=1491,1294,8,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.47539e-10;MQSB=0.999528;RPB=0.957732;SGB=67.1521;VDB=0.449535;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.5:28654205 chr05:028654205 0 W/28654205-28654205 FN4190-S SNP T -> C AC=2;AN=170;BQB=0.909028;DP=2482;DP4=1258,1163,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.67769e-13;MQSB=0.971387;RPB=0.442719;SGB=92.2986;VDB=0.160153;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.5:28656904 chr05:028656904 0 W/28656904-28656904 FN904-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g49970 translation initiation factor IF-2, chloroplast precursor, putative, expressed SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN3959-S.SNP.5:28661491 chr05:028661491 0 W/28661491-28661491 FN3959-S SNP A -> T AC=2;AN=168;BQB=0.861474;DP=2511;DP4=1236,1171,8,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.97142e-06;MQSB=0.510591;RPB=0.998071;SGB=14.8923;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.5:28664036 chr05:028664036 0 W/28664036-28664036 FN3445-S SNP C -> T AC=2;AN=184;BQB=0.94338;DP=2648;DP4=1283,1154,8,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.60704e-11;MQSB=0.955651;RPB=0.742411;SGB=71.3514;VDB=0.998721;EFF=UTR_5_PRIME(MODIFIER||14||531|LOC_Os05g49980|protein_coding|CODING|LOC_Os05g49980.1|2|1),UTR_5_PRIME(MODIFIER||14||377|LOC_Os05g49980|protein_coding|CODING|LOC_Os05g49980.2|2|1) FN4230-S.SNP.5:28667427 chr05:028667427 0 W/28667427-28667427 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.522175;DP=2434;DP4=1209,1162,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.40801e-05;MQSB=0.865322;RPB=0.596874;SGB=34.878;VDB=0.262489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A81T|179|LOC_Os05g49990|protein_coding|CODING|LOC_Os05g49990.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A81T|144|LOC_Os05g49990|protein_coding|CODING|LOC_Os05g49990.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A81T|141|LOC_Os05g49990|protein_coding|CODING|LOC_Os05g49990.2|1|1) FN513-S.SNP.5:28673894 chr05:028673894 0 W/28673894-28673894 FN513-S Single Base Substitution T-C INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN_814-7-1.SNP.5:28678262 chr05:028678262 0 W/28678262-28678262 FN_814-7-1 Single Base Substitution C-T Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN-311.SNP.5:28678848 chr05:028678848 0 W/28678848-28678848 FN-311 Single Base Substitution T-C INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1421-S.SNP.5:28680674 chr05:028680674 0 W/28680674-28680674 FN1421-S Single Base Substitution T-A INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN830-S.SNP.5:28684529 chr05:028684529 0 W/28684529-28684529 FN830-S Single Base Substitution C-A INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2721-S.SNP.5:28686428 chr05:028686428 0 W/28686428-28686428 FN2721-S SNP C -> A AC=2;AN=200;BQB=0.266909;DP=4755;DP4=2193,2312,14,11;HOB=0.0198;ICB=0.495051;MQ=30;MQ0F=0.014511;MQB=0.959676;MQSB=3.34782e-31;RPB=0.438025;SGB=79.9264;VDB=0.251646;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H170N|970|LOC_Os05g50040|protein_coding|CODING|LOC_Os05g50040.1|1|1) FN738-S.SNP.5:28699271 chr05:028699271 0 W/28699271-28699271 FN738-S Single Base Substitution T-G INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. W138-2-1.SNP.5:28700202 chr05:028700202 0 W/28700202-28700202 W138-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN404-S.SNP.5:28701834 chr05:028701834 0 W/28701834-28701834 FN404-S Single Base Substitution T-G INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN2430.SNP.5:28703226 chr05:028703226 0 W/28703226-28703226 FN2430 SNP G -> A AC=2;AN=200;BQB=0.94336;DP=4065;DP4=1718,1992,15,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.6278e-19;MQSB=0.377261;RPB=0.82076;SGB=123.188;VDB=0.860133;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q104|343|LOC_Os05g50080|protein_coding|CODING|LOC_Os05g50080.1|2|1) FN3110-S.SNP.5:28707701 chr05:028707701 0 W/28707701-28707701 FN3110-S SNP G -> C AC=2;AN=184;BQB=0.956939;DP=4155;DP4=1729,2245,26,29;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0418773;MQB=8.80878e-06;MQSB=3.24961e-06;RPB=0.405843;SGB=243.179;VDB=0.34343;EFF=INTRON(MODIFIER||||384|LOC_Os05g50090|protein_coding|CODING|LOC_Os05g50090.1|2|1) W466-5-1.SNP.5:28712132 chr05:028712132 0 W/28712132-28712132 W466-5-1 Single Base Substitution G-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-401.SNP.5:28714530 chr05:028714530 0 W/28714530-28714530 FN-401 Single Base Substitution C-T INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN3050-S.SNP.5:28714530 chr05:028714530 0 W/28714530-28714530 FN3050-S SNP C -> T AC=2;AN=184;BQB=0.178525;DP=2843;DP4=1352,1347,16,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.71664e-09;MQSB=0.469561;RPB=0.971309;SGB=78.0093;VDB=0.598527;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.5:28714795 chr05:028714795 0 W/28714795-28714795 FN2442 SNP A -> T AC=1;AN=200;BQB=0.264037;DP=4285;DP4=2199,1767,10,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000233372;MQB=0.00026296;MQSB=0.316498;RPB=0.996535;SGB=-0.141083;VDB=0.476362;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.5:28716083 chr05:028716083 0 W/28716083-28716083 FN321-S Single Base Substitution C-A INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN_829-2-5.SNP.5:28717903 chr05:028717903 0 W/28717903-28717903 FN_829-2-5 Single Base Substitution G-C HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3431-S.SNP.5:28717946 chr05:028717946 0 W/28717946-28717946 FN3431-S SNP T -> C AC=1;AN=184;BQB=0.983194;DP=3191;DP4=1550,1465,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49979e-11;MQSB=0.882405;RPB=0.242095;SGB=8.32411;VDB=0.249373;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.5:28718261 chr05:028718261 0 W/28718261-28718261 FN_N1-220-1 Single Base Substitution T-C HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3506-S.SNP.5:28727077 chr05:028727077 0 W/28727077-28727077 FN3506-S SNP G -> A AC=2;AN=188;BQB=0.624095;DP=2844;DP4=1229,1511,11,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.73686e-09;MQSB=0.878213;RPB=0.0909439;SGB=36.2493;VDB=0.175713;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.5:28733876 chr05:028733876 0 W/28733876-28733876 FN782-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os05g50130 homeobox associated leucine zipper family protein, expressed SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN782-S.SNP.5:28733881 chr05:028733881 0 W/28733881-28733881 FN782-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g50130 homeobox associated leucine zipper family protein, expressed SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN782-S.SNP.5:28733882 chr05:028733882 0 W/28733882-28733882 FN782-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g50130 homeobox associated leucine zipper family protein, expressed SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN3526-S.SNP.5:28734969 chr05:028734969 0 W/28734969-28734969 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.958665;DP=3035;DP4=1521,1395,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7792e-08;MQSB=0.934645;RPB=0.843176;SGB=35.9843;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.5:28737882 chr05:028737882 0 W/28737882-28737882 FN1330-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN540-S.SNP.5:28742986 chr05:028742986 0 W/28742986-28742986 FN540-S Single Base Substitution T-A INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN-21.SNP.5:28758113 chr05:028758113 0 W/28758113-28758113 FN-21 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN-21.SNP.5:28758118 chr05:028758118 0 W/28758118-28758118 FN-21 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os05g50180 OsCML14 - Calmodulin-related calcium sensor protein, expressed SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN964-S.SNP.5:28759446 chr05:028759446 0 W/28759446-28759446 FN964-S Single Base Substitution C-G INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2308.SNP.5:28762688 chr05:028762688 0 W/28762688-28762688 FN2308 SNP A -> G AC=2;AN=192;BQB=0.999717;DP=4964;DP4=2415,2279,22,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.69908e-22;MQSB=0.967126;RPB=0.663896;SGB=195.27;VDB=0.966271;EFF=INTRON(MODIFIER||||381|LOC_Os05g50190|protein_coding|CODING|LOC_Os05g50190.1|1|1) FN564-S.SNP.5:28766945 chr05:028766945 0 W/28766945-28766945 FN564-S Single Base Substitution G-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2496.SNP.5:28767865 chr05:028767865 0 W/28767865-28767865 FN2496 SNP G -> T AC=2;AN=200;BQB=0.178973;DP=4617;DP4=2145,2213,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.38975e-13;MQSB=0.994032;RPB=0.9858;SGB=-5.24302;VDB=0.951325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q402K|424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.2|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q402K|424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.1|14|1) FN1619-S.SNP.5:28768045 chr05:028768045 0 W/28768045-28768045 FN1619-S Single Base Substitution T-A INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4135-S.SNP.5:28768893 chr05:028768893 0 W/28768893-28768893 FN4135-S SNP T -> A AC=2;AN=182;BQB=0.869698;DP=2815;DP4=1406,1335,10,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.95945e-19;MQSB=0.936789;RPB=0.423023;SGB=129.818;VDB=0.14951;EFF=INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.1|11|1),INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.2|11|1) FN4135-S.SNP.5:28768894 chr05:028768894 0 W/28768894-28768894 FN4135-S SNP T -> C AC=2;AN=182;BQB=0.833679;DP=2819;DP4=1391,1342,11,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.60957e-19;MQSB=0.908562;RPB=0.395381;SGB=98.8232;VDB=0.124924;EFF=INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.1|11|1),INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.2|11|1) FN2457.SNP.5:28770111 chr05:028770111 0 W/28770111-28770111 FN2457 SNP C -> T AC=1;AN=200;BQB=0.887327;DP=5004;DP4=2441,2238,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.98631e-12;MQSB=0.901376;RPB=0.600122;SGB=17.5158;VDB=0.384507;EFF=INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.1|8|1),INTRON(MODIFIER||||424|LOC_Os05g50200|protein_coding|CODING|LOC_Os05g50200.2|8|1) FN3914-S.SNP.5:28775073 chr05:028775073 0 W/28775073-28775073 FN3914-S SNP G -> A AC=1;AN=158;BQB=0.817027;DP=2456;DP4=1191,1128,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.29473e-11;MQSB=0.955449;RPB=0.0105871;SGB=28.5576;VDB=0.270256;EFF=UTR_3_PRIME(MODIFIER||41||415|LOC_Os05g50210|protein_coding|CODING|LOC_Os05g50210.1|14|1) FN3914-S.SNP.5:28775074 chr05:028775074 0 W/28775074-28775074 FN3914-S SNP G -> A AC=1;AN=158;BQB=0.944165;DP=2452;DP4=1190,1152,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.58312e-13;MQSB=0.921243;RPB=0.0918233;SGB=8.93339;VDB=0.797809;EFF=UTR_3_PRIME(MODIFIER||40||415|LOC_Os05g50210|protein_coding|CODING|LOC_Os05g50210.1|14|1) FN1529-S.SNP.5:28775760 chr05:028775760 0 W/28775760-28775760 FN1529-S Single Base Substitution T-G INTRON Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2327.SNP.5:28781563 chr05:028781563 0 W/28781563-28781563 FN2327 SNP G -> T AC=2;AN=192;BQB=0.170905;DP=5021;DP4=2390,2324,29,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.17755e-26;MQSB=0.635196;RPB=0.580448;SGB=103.28;VDB=0.640419;EFF=INTRON(MODIFIER||||271|LOC_Os05g50220|protein_coding|CODING|LOC_Os05g50220.1|6|1),INTRON(MODIFIER||||187|LOC_Os05g50220|protein_coding|CODING|LOC_Os05g50220.2|6|1) FN3756-S.SNP.5:28784138 chr05:028784138 0 W/28784138-28784138 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.964627;DP=2754;DP4=1328,1341,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41587e-06;MQSB=0.953168;RPB=0.997777;SGB=35.4339;VDB=0.796894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.5:28785601 chr05:028785601 0 W/28785601-28785601 FN1679-S SNP A -> T AC=2;AN=188;BQB=0.00923671;DP=3841;DP4=2143,1633,27,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06547e-16;MQSB=0.999544;RPB=0.997403;SGB=-142.945;VDB=0.958392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.5:28787980 chr05:028787980 0 W/28787980-28787980 FN1315-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g50230 DUF1645 domain containing protein, putative, expressed SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN738-S.SNP.5:28788053 chr05:028788053 0 W/28788053-28788053 FN738-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g50230 DUF1645 domain containing protein, putative, expressed SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN738-S.SNP.5:28788054 chr05:028788054 0 W/28788054-28788054 FN738-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN1234-S.SNP.5:28795040 chr05:028795040 0 W/28795040-28795040 FN1234-S Single Base Substitution A-G INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN886-S.SNP.5:28797131 chr05:028797131 0 W/28797131-28797131 FN886-S Single Base Substitution T-A INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2648-S.SNP.5:28808740 chr05:028808740 0 W/28808740-28808740 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.898733;DP=4552;DP4=2013,2279,3,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93624e-08;MQSB=0.984575;RPB=0.586031;SGB=21.6694;VDB=0.894812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.5:28808754 chr05:028808754 0 W/28808754-28808754 FN1043-S Single Base Substitution T-A INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN2640-S.SNP.5:28813197 chr05:028813197 0 W/28813197-28813197 FN2640-S SNP A -> T AC=1;AN=200;BQB=0.676199;DP=4767;DP4=2052,2501,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.26506e-08;MQSB=0.979907;RPB=0.616921;SGB=3.06925;VDB=0.0452691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.5:28818479 chr05:028818479 0 W/28818479-28818479 FN2397 SNP G -> T AC=1;AN=200;BQB=0.505805;DP=3151;DP4=1482,1395,9,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.08089e-07;MQSB=2.61435e-09;RPB=0.946707;SGB=43.8747;VDB=0.376277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G236V|279|LOC_Os05g50270|protein_coding|CODING|LOC_Os05g50270.1|2|1) FN2107-S.SNP.5:28820674 chr05:028820674 0 W/28820674-28820674 FN2107-S SNP T -> A AC=1;AN=168;BQB=0.980559;DP=4261;DP4=2235,1984,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.42949e-11;MQSB=0.972658;RPB=0.969;SGB=-11.926;VDB=0.733421;EFF=INTRON(MODIFIER||||501|LOC_Os05g50280|protein_coding|CODING|LOC_Os05g50280.1|12|1) FN-290.SNP.5:28825478 chr05:028825478 0 W/28825478-28825478 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3788-S.SNP.5:28850277 chr05:028850277 0 W/28850277-28850277 FN3788-S SNP G -> A AC=1;AN=190;BQB=0.29037;DP=2618;DP4=1247,1267,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000206119;MQSB=0.662352;RPB=0.180483;SGB=18.552;VDB=0.194222;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G22|111|LOC_Os05g50350|protein_coding|CODING|LOC_Os05g50350.1|1|1) FN4140-S.SNP.5:28855163 chr05:028855163 0 W/28855163-28855163 FN4140-S SNP T -> C AC=1;AN=170;BQB=0.995551;DP=3156;DP4=1420,1547,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.31177e-10;MQSB=0.855907;RPB=0.731522;SGB=58.9766;VDB=0.759018;EFF=SPLICE_SITE_REGION(LOW||||201|LOC_Os05g50360|protein_coding|CODING|LOC_Os05g50360.1|1|1),INTRON(MODIFIER||||201|LOC_Os05g50360|protein_coding|CODING|LOC_Os05g50360.1|1|1) FN1277-S.SNP.5:28862907 chr05:028862907 0 W/28862907-28862907 FN1277-S Single Base Substitution T-A INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3707-S.SNP.5:28865055 chr05:028865055 0 W/28865055-28865055 FN3707-S SNP T -> C AC=1;AN=190;BQB=0.876199;DP=2726;DP4=1235,1295,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0393e-08;MQSB=0.906488;RPB=0.575662;SGB=26.2136;VDB=0.373011;EFF=INTRON(MODIFIER||||1423|LOC_Os05g50370|protein_coding|CODING|LOC_Os05g50370.1|1|1) FN874-S.SNP.5:28875115 chr05:028875115 0 W/28875115-28875115 FN874-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os05g50380 glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3716-S.SNP.5:28876100 chr05:028876100 0 W/28876100-28876100 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.870117;DP=2875;DP4=1259,1512,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29535e-07;MQSB=0.999989;RPB=0.68226;SGB=44.5415;VDB=0.54425;EFF=INTRON(MODIFIER||||519|LOC_Os05g50380|protein_coding|CODING|LOC_Os05g50380.2|1|1),INTRON(MODIFIER||||519|LOC_Os05g50380|protein_coding|CODING|LOC_Os05g50380.1|1|1) FN3716-S.SNP.5:28876101 chr05:028876101 0 W/28876101-28876101 FN3716-S SNP A -> T AC=1;AN=190;BQB=0.999739;DP=2884;DP4=1218,1520,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27484e-07;MQSB=0.909296;RPB=0.970628;SGB=28.9929;VDB=0.567998;EFF=INTRON(MODIFIER||||519|LOC_Os05g50380|protein_coding|CODING|LOC_Os05g50380.2|1|1),INTRON(MODIFIER||||519|LOC_Os05g50380|protein_coding|CODING|LOC_Os05g50380.1|1|1) FN2489.SNP.5:28878975 chr05:028878975 0 W/28878975-28878975 FN2489 SNP C -> T AC=1;AN=200;BQB=0.560667;DP=4351;DP4=1938,2156,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000229832;MQB=8.37565e-12;MQSB=1.52106e-05;RPB=0.945825;SGB=79.9264;VDB=0.402944;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.5:28879924 chr05:028879924 0 W/28879924-28879924 FN-173 Single Base Substitution C-T INTERGENIC HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN3364-S.SNP.5:28881434 chr05:028881434 0 W/28881434-28881434 FN3364-S SNP G -> A AC=2;AN=184;BQB=0.981715;DP=3568;DP4=1598,1833,9,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.31935e-13;MQSB=0.774925;RPB=0.912089;SGB=78.0093;VDB=0.859294;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.5:28882604 chr05:028882604 0 W/28882604-28882604 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.987878;DP=2650;DP4=1384,1187,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.918e-11;MQSB=0.954058;RPB=0.622392;SGB=85.5263;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.5:28885004 chr05:028885004 0 W/28885004-28885004 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.210263;DP=2416;DP4=951,1265,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.221026;MQB=0.999474;MQSB=4.90454e-44;RPB=0.262389;SGB=13.4442;VDB=0.594614;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.5:28888072 chr05:028888072 0 W/28888072-28888072 FN550-S Single Base Substitution G-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN-262.SNP.5:28889857 chr05:028889857 0 W/28889857-28889857 FN-262 Single Base Substitution A-G INTRON HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3400-S.SNP.5:28895240 chr05:028895240 0 W/28895240-28895240 FN3400-S SNP G -> T AC=1;AN=184;BQB=0.916718;DP=3083;DP4=1602,1401,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.15219e-09;MQSB=0.831845;RPB=0.0723271;SGB=53.2642;VDB=0.0834917;EFF=INTRON(MODIFIER||||608|LOC_Os05g50410|protein_coding|CODING|LOC_Os05g50410.1|16|1),INTRON(MODIFIER||||586|LOC_Os05g50410|protein_coding|CODING|LOC_Os05g50410.2|16|1) FN3400-S.SNP.5:28895241 chr05:028895241 0 W/28895241-28895241 FN3400-S SNP G -> T AC=1;AN=184;BQB=0.984746;DP=3077;DP4=1583,1406,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96621e-08;MQSB=0.826253;RPB=0.0383847;SGB=39.2697;VDB=0.102598;EFF=INTRON(MODIFIER||||608|LOC_Os05g50410|protein_coding|CODING|LOC_Os05g50410.1|16|1),INTRON(MODIFIER||||586|LOC_Os05g50410|protein_coding|CODING|LOC_Os05g50410.2|16|1) FN594-S.SNP.5:28900209 chr05:028900209 0 W/28900209-28900209 FN594-S Single Base Substitution A-G INTRON HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN4022-S.SNP.5:28902844 chr05:028902844 0 W/28902844-28902844 FN4022-S SNP C -> A AC=1;AN=168;BQB=0.949165;DP=2965;DP4=1465,1390,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22741e-05;MQSB=0.783563;RPB=0.7124;SGB=38.8805;VDB=0.0122151;EFF=INTRON(MODIFIER||||280|LOC_Os05g50420|protein_coding|CODING|LOC_Os05g50420.1|4|1) FN921-S.SNP.5:28904469 chr05:028904469 0 W/28904469-28904469 FN921-S Single Base Substitution C-T INTRON HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN2433.SNP.5:28905222 chr05:028905222 0 W/28905222-28905222 FN2433 SNP G -> A AC=1;AN=200;BQB=0.833978;DP=4875;DP4=2317,2181,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48597e-16;MQSB=0.19057;RPB=0.9999;SGB=25.5416;VDB=0.0705658;EFF=INTRON(MODIFIER||||280|LOC_Os05g50420|protein_coding|CODING|LOC_Os05g50420.1|4|1) FN-105.SNP.5:28909955 chr05:028909955 0 W/28909955-28909955 FN-105 Single Base Substitution G-C INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN-59.SNP.5:28910157 chr05:028910157 0 W/28910157-28910157 FN-59 Single Base Substitution T-A INTRON HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3384-S.SNP.5:28925471 chr05:028925471 0 W/28925471-28925471 FN3384-S SNP C -> T AC=1;AN=184;BQB=0.921563;DP=3070;DP4=1378,1597,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44139e-08;MQSB=0.899145;RPB=0.632457;SGB=35.7479;VDB=0.252301;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V449|634|LOC_Os05g50460|protein_coding|CODING|LOC_Os05g50460.1|1|1) FN2153-S.SNP.5:28932231 chr05:028932231 0 W/28932231-28932231 FN2153-S SNP A -> G AC=1;AN=168;BQB=0.0929345;DP=4297;DP4=2542,1724,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.13175e-06;MQSB=0.990437;RPB=0.958984;SGB=-37.7974;VDB=0.172354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.5:28939939 chr05:028939939 0 W/28939939-28939939 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.701525;DP=2500;DP4=876,1471,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74266e-09;MQSB=0.157151;RPB=0.983656;SGB=43.2083;VDB=0.829703;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.5:28946281 chr05:028946281 0 W/28946281-28946281 FN-400 Single Base Substitution C-T INTRON HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.5:28946281 chr05:028946281 0 W/28946281-28946281 FN400-S Single Base Substitution C-T INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN2403.SNP.5:28963008 chr05:028963008 0 W/28963008-28963008 FN2403 SNP G -> A AC=1;AN=200;BQB=0.593845;DP=5041;DP4=2480,2232,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.76265e-11;MQSB=0.803133;RPB=0.952958;SGB=58.2954;VDB=0.472149;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F202|540|LOC_Os05g50510|protein_coding|CODING|LOC_Os05g50510.1|7|1) FN4052-S.SNP.5:28968045 chr05:028968045 0 W/28968045-28968045 FN4052-S SNP A -> G AC=2;AN=168;BQB=0.952373;DP=2720;DP4=1123,1387,16,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.64486e-17;MQSB=0.101847;RPB=0.599465;SGB=87.8168;VDB=0.934145;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.5:28970440 chr05:028970440 0 W/28970440-28970440 FN4249-S SNP G -> A AC=2;AN=170;BQB=0.934175;DP=1442;DP4=779,606,8,4;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0145631;MQB=0.997957;MQSB=0.902033;RPB=0.983349;SGB=47.8722;VDB=0.985276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.5:28971883 chr05:028971883 0 W/28971883-28971883 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.59982;DP=4248;DP4=1861,2275,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00141243;MQB=0.000109668;MQSB=0.994084;RPB=0.950641;SGB=39.5276;VDB=0.731215;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R154|1404|LOC_Os05g50520|protein_coding|CODING|LOC_Os05g50520.1|1|1) FN3527-S.SNP.5:28973529 chr05:028973529 0 W/28973529-28973529 FN3527-S SNP C -> T AC=2;AN=188;BQB=0.985897;DP=5028;DP4=2621,2289,26,20;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0439539;MQB=0.650698;MQSB=0;RPB=0.943276;SGB=203.451;VDB=0.22445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A689V|1404|LOC_Os05g50520|protein_coding|CODING|LOC_Os05g50520.1|2|1) FN577-S.SNP.5:28974835 chr05:028974835 0 W/28974835-28974835 FN577-S Single Base Substitution A-T INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN2653-S.SNP.5:28975474 chr05:028975474 0 W/28975474-28975474 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.982819;DP=5642;DP4=3078,2212,13,12;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.337292;MQB=0.209555;MQSB=0;RPB=0.534492;SGB=109.527;VDB=0.639477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1188D|1404|LOC_Os05g50520|protein_coding|CODING|LOC_Os05g50520.1|4|1) FN798-S.SNP.5:28985745 chr05:028985745 0 W/28985745-28985745 FN798-S Single Base Substitution T-C INTRON HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1745-S.SNP.5:28988896 chr05:028988896 0 W/28988896-28988896 FN1745-S SNP G -> A AC=1;AN=188;BQB=7.68603e-14;DP=4063;DP4=1734,2291,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03071e-09;MQSB=0.999953;RPB=0.271844;SGB=-101.181;VDB=0.0642907;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.5:28991326 chr05:028991326 0 W/28991326-28991326 FN1156-XA21 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3843-S.SNP.5:28996697 chr05:028996697 0 W/28996697-28996697 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.740081;DP=3368;DP4=1616,1664,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08204e-07;MQSB=0.940949;RPB=0.762024;SGB=44.5415;VDB=0.440607;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R201|446|LOC_Os05g50570|protein_coding|CODING|LOC_Os05g50570.1|1|1) FN4140-S.SNP.5:28998060 chr05:028998060 0 W/28998060-28998060 FN4140-S SNP T -> A AC=1;AN=170;BQB=0.954345;DP=2495;DP4=1268,1150,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.65754e-07;MQSB=0.947757;RPB=0.999688;SGB=43.4296;VDB=0.143787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.5:29000772 chr05:029000772 0 W/29000772-29000772 FN3500-S SNP C -> T AC=2;AN=188;BQB=0.496698;DP=4132;DP4=2158,1857,15,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.07003e-15;MQSB=0.57939;RPB=0.583343;SGB=106.85;VDB=0.56959;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T171|451|LOC_Os05g50580|protein_coding|CODING|LOC_Os05g50580.1|1|1) FN-408.SNP.5:29004962 chr05:029004962 0 W/29004962-29004962 FN-408 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g50600 OsSCP31 - Putative Serine Carboxypeptidase homologue, expressed SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN1420-S.SNP.5:29004962 chr05:029004962 0 W/29004962-29004962 FN1420-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os05g50600 OsSCP31 - Putative Serine Carboxypeptidase homologue, expressed SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2372.SNP.5:29004962 chr05:029004962 0 W/29004962-29004962 FN2372 SNP G -> A AC=1;AN=192;BQB=0.135421;DP=4216;DP4=2152,1782,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.46917e-08;MQSB=0.707873;RPB=0.879086;SGB=8.91915;VDB=0.099409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A257T|442|LOC_Os05g50600|protein_coding|CODING|LOC_Os05g50600.1|1|1) FN2407.SNP.5:29004962 chr05:029004962 0 W/29004962-29004962 FN2407 SNP G -> A AC=2;AN=200;BQB=0.417868;DP=3636;DP4=1808,1562,13,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.36969e-11;MQSB=0.829519;RPB=0.909134;SGB=69.1109;VDB=0.250585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A257T|442|LOC_Os05g50600|protein_coding|CODING|LOC_Os05g50600.1|1|1) FN837-S.SNP.5:29010361 chr05:029010361 0 W/29010361-29010361 FN837-S Single Base Substitution G-A INTRON HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN1128-S.SNP.5:29012282 chr05:029012282 0 W/29012282-29012282 FN1128-S Single Base Substitution T-C INTRON HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN3803-S.SNP.5:29016613 chr05:029016613 0 W/29016613-29016613 FN3803-S SNP C -> T AC=1;AN=190;BQB=0.998942;DP=2655;DP4=1415,1155,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.06177e-09;MQSB=0.587494;RPB=0.375017;SGB=67.3108;VDB=0.538793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.5:29030789 chr05:029030789 0 W/29030789-29030789 FN2220-S SNP T -> G AC=1;AN=190;BQB=0.994176;DP=4893;DP4=2309,2197,21,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32108e-23;MQSB=0.99835;RPB=0.734731;SGB=92.6144;VDB=0.363358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L171W|752|LOC_Os05g50640|protein_coding|CODING|LOC_Os05g50640.1|2|1) FN3757-S.SNP.5:29032461 chr05:029032461 0 W/29032461-29032461 FN3757-S SNP T -> C AC=1;AN=190;BQB=0.966083;DP=2662;DP4=1089,1480,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.47584e-05;MQSB=0.993268;RPB=0.0545508;SGB=18.3316;VDB=0.0655916;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C728|752|LOC_Os05g50640|protein_coding|CODING|LOC_Os05g50640.1|2|1) FN2480.SNP.5:29036928 chr05:029036928 0 W/29036928-29036928 FN2480 SNP C -> T AC=1;AN=200;BQB=0.288139;DP=4880;DP4=2061,2390,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16426e-10;MQSB=0.83639;RPB=0.129294;SGB=-134.064;VDB=0.342768;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.5:29040113 chr05:029040113 0 W/29040113-29040113 FN-106 Single Base Substitution C-T INTRON HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2670-S.SNP.5:29045586 chr05:029045586 0 W/29045586-29045586 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.999996;DP=4965;DP4=2337,2380,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.68539e-18;MQSB=0.998119;RPB=0.255685;SGB=25.5416;VDB=0.502211;EFF=INTRON(MODIFIER||||1136|LOC_Os05g50660|protein_coding|CODING|LOC_Os05g50660.1|14|1) FN4030-S.SNP.5:29048741 chr05:029048741 0 W/29048741-29048741 FN4030-S SNP A -> G AC=1;AN=168;BQB=0.810651;DP=2602;DP4=1377,1116,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.9123e-09;MQSB=0.991505;RPB=0.334333;SGB=56.6036;VDB=0.6178;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.5:29048797 chr05:029048797 0 W/29048797-29048797 FN4030-S SNP T -> A AC=1;AN=168;BQB=0.424852;DP=2631;DP4=1306,1119,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.02006e-10;MQSB=0.992961;RPB=0.616501;SGB=9.91396;VDB=0.737694;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.5:29053005 chr05:029053005 0 W/29053005-29053005 FN788-S Single Base Substitution T-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1228-S.SNP.5:29053641 chr05:029053641 0 W/29053641-29053641 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2322.SNP.5:29060364 chr05:029060364 0 W/29060364-29060364 FN2322 SNP G -> A AC=2;AN=192;BQB=0.7548;DP=4191;DP4=1786,2038,11,24;HOB=0.0206163;ICB=0.494846;MQ=24;MQ0F=0.273204;MQB=0.995423;MQSB=0;RPB=0.993746;SGB=-4.04606;VDB=0.729316;EFF=INTRON(MODIFIER||||467|LOC_Os05g50690|protein_coding|CODING|LOC_Os05g50690.1|2|1) FN938-S.SNP.5:29062950 chr05:029062950 0 W/29062950-29062950 FN938-S Single Base Substitution A-G INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3492-S.SNP.5:29066886 chr05:029066886 0 W/29066886-29066886 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.643926;DP=2514;DP4=1382,996,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000397772;MQB=2.08772e-12;MQSB=0.42299;RPB=0.0845902;SGB=-176.681;VDB=0.288419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.5:29073084 chr05:029073084 0 W/29073084-29073084 FN3639-S SNP A -> T AC=1;AN=190;BQB=0.949355;DP=2711;DP4=1273,1337,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03826e-06;MQSB=0.978347;RPB=0.998314;SGB=28.9929;VDB=0.335037;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.5:29081311 chr05:029081311 0 W/29081311-29081311 FN404-S Single Base Substitution C-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1700-S.SNP.5:29083723 chr05:029083723 0 W/29083723-29083723 FN1700-S SNP A -> G AC=1;AN=188;BQB=0.000872873;DP=3438;DP4=2124,1279,18,9;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0177429;MQB=0.465821;MQSB=0;RPB=0.97622;SGB=-135.175;VDB=0.794299;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.5:29093298 chr05:029093298 0 W/29093298-29093298 FN934-S Single Base Substitution A-G INTERGENIC HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3445-S.SNP.5:29097108 chr05:029097108 0 W/29097108-29097108 FN3445-S SNP A -> G AC=1;AN=184;BQB=0.999009;DP=2703;DP4=1295,1341,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34168e-05;MQSB=0.99992;RPB=0.619036;SGB=30.6558;VDB=0.49048;EFF=INTRON(MODIFIER||||855|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.1|5|1),INTRON(MODIFIER||||827|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.2|5|1),INTRON(MODIFIER||||689|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.3|4|1) FN951-S.SNP.5:29097831 chr05:029097831 0 W/29097831-29097831 FN951-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g50750 AAA family ATPase, putative, expressed SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3561-S.SNP.5:29098332 chr05:029098332 0 W/29098332-29098332 FN3561-S SNP G -> A AC=1;AN=188;BQB=0.986079;DP=3879;DP4=2036,1700,19,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.10933e-21;MQSB=0.99295;RPB=0.452159;SGB=167.105;VDB=0.507973;EFF=INTRON(MODIFIER||||855|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.1|1|1),INTRON(MODIFIER||||827|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.2|1|1) FN1333-S.SNP.5:29098538 chr05:029098538 0 W/29098538-29098538 FN1333-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3881-S.SNP.5:29098793 chr05:029098793 0 W/29098793-29098793 FN3881-S SNP C -> A AC=2;AN=158;BQB=0.908464;DP=3012;DP4=1064,1826,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.15656e-11;MQSB=0.885598;RPB=0.985162;SGB=74.5068;VDB=0.222814;EFF=UTR_5_PRIME(MODIFIER||64||855|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.1|1|1),UTR_5_PRIME(MODIFIER||64||827|LOC_Os05g50750|protein_coding|CODING|LOC_Os05g50750.2|1|1) FN2398.SNP.5:29112268 chr05:029112268 0 W/29112268-29112268 FN2398 SNP T -> A AC=2;AN=200;BQB=0.76036;DP=4634;DP4=2325,2028,21,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.18682e-21;MQSB=0.920739;RPB=0.833555;SGB=-0.401659;VDB=0.719749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.5:29112269 chr05:029112269 0 W/29112269-29112269 FN2398 SNP G -> A AC=2;AN=200;BQB=0.384958;DP=4628;DP4=2350,2058,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12448e-23;MQSB=0.930261;RPB=0.541778;SGB=43.1985;VDB=0.399147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.5:29120373 chr05:029120373 0 W/29120373-29120373 FN3369-S SNP G -> A AC=2;AN=184;BQB=0.960958;DP=3506;DP4=1753,1617,30,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.03639e-22;MQSB=0.711988;RPB=0.861218;SGB=243.179;VDB=0.00766254;EFF=UTR_5_PRIME(MODIFIER||61||377|LOC_Os05g50770|protein_coding|CODING|LOC_Os05g50770.2|1|1) FN1470-S.SNP.5:29121519 chr05:029121519 0 W/29121519-29121519 FN1470-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2734-S.SNP.5:29128123 chr05:029128123 0 W/29128123-29128123 FN2734-S SNP G -> T AC=1;AN=200;BQB=0.997223;DP=5014;DP4=2200,2395,14,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.6039e-16;MQSB=0.856541;RPB=0.274506;SGB=94.3471;VDB=0.812338;EFF=INTERGENIC(MODIFIER||||||||||1) FN1742-S.SNP.5:29144829 chr05:029144829 0 W/29144829-29144829 FN1742-S SNP C -> T AC=1;AN=188;BQB=0.501688;DP=1936;DP4=1258,639,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.29446e-07;MQSB=0.348574;RPB=0.597426;SGB=8.62479;VDB=0.723793;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.5:29152916 chr05:029152916 0 W/29152916-29152916 FN4075-S SNP A -> T AC=1;AN=182;BQB=0.798973;DP=3236;DP4=1524,1644,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000628474;MQSB=0.920964;RPB=0.800821;SGB=35.0899;VDB=0.401367;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.5:29156594 chr05:029156594 0 W/29156594-29156594 FN3881-S SNP T -> C AC=2;AN=158;BQB=0.765343;DP=2564;DP4=1390,989,10,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.31789e-12;MQSB=0.615249;RPB=0.271774;SGB=-13.213;VDB=0.515461;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A637|699|LOC_Os05g50830|protein_coding|CODING|LOC_Os05g50830.1|1|1),UTR_3_PRIME(MODIFIER||758||355|LOC_Os05g50840|protein_coding|CODING|LOC_Os05g50840.1|8|1),UTR_3_PRIME(MODIFIER||758||304|LOC_Os05g50840|protein_coding|CODING|LOC_Os05g50840.2|9|1),INTRON(MODIFIER||||672|LOC_Os05g50830|protein_coding|CODING|LOC_Os05g50830.2|1|1) FN3832-S.SNP.5:29158565 chr05:029158565 0 W/29158565-29158565 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.971502;DP=2767;DP4=1416,1239,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.15841e-08;MQSB=0.995288;RPB=0.858088;SGB=49.0954;VDB=0.0838288;EFF=INTRON(MODIFIER||||355|LOC_Os05g50840|protein_coding|CODING|LOC_Os05g50840.1|4|1),INTRON(MODIFIER||||304|LOC_Os05g50840|protein_coding|CODING|LOC_Os05g50840.2|4|1) FN864-S.SNP.5:29158615 chr05:029158615 0 W/29158615-29158615 FN864-S Single Base Substitution C-T INTRON HOMO SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3650-S.SNP.5:29161728 chr05:029161728 0 W/29161728-29161728 FN3650-S SNP G -> C AC=1;AN=190;BQB=0.658137;DP=2701;DP4=1613,989,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0359e-07;MQSB=0.967835;RPB=0.584565;SGB=32.5467;VDB=0.522028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.5:29164521 chr05:029164521 0 W/29164521-29164521 FN3866-S SNP C -> T AC=1;AN=158;BQB=0.999628;DP=2244;DP4=854,1252,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.77998e-06;MQSB=0.0017305;RPB=0.679731;SGB=51.4366;VDB=0.5463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S204N|294|LOC_Os05g50850|protein_coding|CODING|LOC_Os05g50850.1|2|1) FN2329.SNP.5:29172277 chr05:029172277 0 W/29172277-29172277 FN2329 SNP T -> C AC=1;AN=192;BQB=0.97563;DP=5419;DP4=2586,2594,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.44825e-10;MQSB=7.53749e-07;RPB=0.595298;SGB=85.7252;VDB=0.751688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.5:29177904 chr05:029177904 0 W/29177904-29177904 FN3848-S SNP C -> T AC=2;AN=158;BQB=0.823255;DP=2553;DP4=1287,1146,19,15;HOB=0.024996;ICB=0.493752;MQ=37;MQ0F=0.088915;MQB=0.0599714;MQSB=1.05372e-08;RPB=0.203212;SGB=143.195;VDB=0.21183;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R209|444|LOC_Os05g50870|protein_coding|CODING|LOC_Os05g50870.1|1|1) FN2582-S.SNP.5:29179616 chr05:029179616 0 W/29179616-29179616 FN2582-S SNP G -> T AC=1;AN=198;BQB=0.0581642;DP=3284;DP4=1131,1702,19,80;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0377588;MQB=1.87715e-37;MQSB=1.17597e-14;RPB=4.44731e-25;SGB=-1600.82;VDB=6.15942e-20;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.5:29187406 chr05:029187406 0 W/29187406-29187406 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.827581;DP=2497;DP4=1179,1169,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33215e-08;MQSB=0.920187;RPB=0.611269;SGB=53.2642;VDB=0.974093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.5:29189730 chr05:029189730 0 W/29189730-29189730 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.457535;DP=2547;DP4=1257,1095,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67542e-05;MQSB=0.227695;RPB=0.999983;SGB=39.2697;VDB=0.729579;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.5:29197817 chr05:029197817 0 W/29197817-29197817 FN1375-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3388-S.SNP.5:29203725 chr05:029203725 0 W/29203725-29203725 FN3388-S SNP T -> G AC=2;AN=184;BQB=0.912521;DP=2645;DP4=1234,1266,15,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.36571e-18;MQSB=0.77308;RPB=0.848434;SGB=73.7109;VDB=0.962437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L199V|348|LOC_Os05g50890|protein_coding|CODING|LOC_Os05g50890.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L199V|581|LOC_Os05g50890|protein_coding|CODING|LOC_Os05g50890.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L199V|581|LOC_Os05g50890|protein_coding|CODING|LOC_Os05g50890.2|4|1) FN1555-S.SNP.5:29219994 chr05:029219994 0 W/29219994-29219994 FN1555-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN902-S.SNP.5:29223059 chr05:029223059 0 W/29223059-29223059 FN902-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os05g50920 transmembrane amino acid transporter protein, putative, expressed SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1470-S.SNP.5:29249543 chr05:029249543 0 W/29249543-29249543 FN1470-S Single Base Substitution G-A INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3325-S.SNP.5:29257070 chr05:029257070 0 W/29257070-29257070 FN3325-S SNP C -> A AC=1;AN=184;BQB=0.932159;DP=2956;DP4=1565,1304,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=6.01659e-05;MQSB=0.0884433;RPB=0.890164;SGB=26.1347;VDB=0.470665;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.5:29257552 chr05:029257552 0 W/29257552-29257552 FN786-S Single Base Substitution G-A INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN786-S.SNP.5:29257553 chr05:029257553 0 W/29257553-29257553 FN786-S Single Base Substitution T-A INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2114-S.SNP.5:29257999 chr05:029257999 0 W/29257999-29257999 FN2114-S SNP T -> C AC=1;AN=168;BQB=0.130734;DP=4051;DP4=2052,1952,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.12136e-09;MQSB=0.978876;RPB=0.713753;SGB=-40.6433;VDB=0.177481;EFF=UTR_3_PRIME(MODIFIER||1445||555|LOC_Os05g50990|protein_coding|CODING|LOC_Os05g50990.1|6|1) FN2460.SNP.5:29261444 chr05:029261444 0 W/29261444-29261444 FN2460 SNP C -> T AC=2;AN=200;BQB=0.920364;DP=3461;DP4=1491,1589,16,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000288934;MQB=7.33929e-13;MQSB=0.886357;RPB=0.778308;SGB=68.5625;VDB=0.891545;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A157|555|LOC_Os05g50990|protein_coding|CODING|LOC_Os05g50990.1|1|1) FN919-S.SNP.5:29262486 chr05:029262486 0 W/29262486-29262486 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN1012-S.SNP.5:29265875 chr05:029265875 0 W/29265875-29265875 FN1012-S Single Base Substitution A-G INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3707-S.SNP.5:29266280 chr05:029266280 0 W/29266280-29266280 FN3707-S SNP T -> C AC=1;AN=190;BQB=0.966254;DP=2837;DP4=1354,1338,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55759e-06;MQSB=0.968622;RPB=0.982571;SGB=35.4339;VDB=0.447301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.5:29276302 chr05:029276302 0 W/29276302-29276302 FN2438 SNP C -> T AC=1;AN=200;BQB=0.222188;DP=4650;DP4=2204,2181,11,18;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.12043;MQB=0.285813;MQSB=0;RPB=0.726194;SGB=94.3471;VDB=0.769015;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.5:29286749 chr05:029286749 0 W/29286749-29286749 FN-284 Single Base Substitution A-C UTR_5_PRIME HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3394-S.SNP.5:29291183 chr05:029291183 0 W/29291183-29291183 FN3394-S SNP G -> T AC=1;AN=184;BQB=0.876447;DP=3074;DP4=1212,1539,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000325309;MQB=1.85074e-09;MQSB=0.000335346;RPB=0.106185;SGB=-66.616;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.5:29302060 chr05:029302060 0 W/29302060-29302060 FN2196-S SNP A -> G AC=2;AN=190;BQB=0.896002;DP=5207;DP4=2164,2685,31,39;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.2181e-40;MQSB=0.857269;RPB=0.394088;SGB=164.123;VDB=0.642849;EFF=INTRON(MODIFIER||||248|LOC_Os05g51060|protein_coding|CODING|LOC_Os05g51060.1|7|1) FN1316-S.SNP.5:29304509 chr05:029304509 0 W/29304509-29304509 FN1316-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1375-S.SNP.5:29304999 chr05:029304999 0 W/29304999-29304999 FN1375-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN-179.SNP.5:29306681 chr05:029306681 0 W/29306681-29306681 FN-179 Single Base Substitution G-T INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3805-S.SNP.5:29306822 chr05:029306822 0 W/29306822-29306822 FN3805-S SNP C -> T AC=1;AN=190;BQB=0.911106;DP=2614;DP4=1103,1386,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.68043e-05;MQSB=0.115463;RPB=0.860242;SGB=53.6492;VDB=0.576839;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.5:29312305 chr05:029312305 0 W/29312305-29312305 FN695-S Single Base Substitution G-A STOP_GAINED HET LOC_Os05g51080 expressed protein SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN-36.SNP.5:29318596 chr05:029318596 0 W/29318596-29318596 FN-36 Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN832-S.SNP.5:29323744 chr05:029323744 0 W/29323744-29323744 FN832-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os05g51110 expressed protein SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN3576-S.SNP.5:29326092 chr05:029326092 0 W/29326092-29326092 FN3576-S SNP C -> A AC=1;AN=188;BQB=0.994337;DP=3964;DP4=1396,2484,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.5236e-07;MQSB=0.992187;RPB=0.867754;SGB=58.0655;VDB=0.0595074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.5:29330647 chr05:029330647 0 W/29330647-29330647 FN3472-S SNP G -> A AC=2;AN=184;BQB=0.981317;DP=3129;DP4=1636,1364,18,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.95091e-19;MQSB=0.995672;RPB=0.768533;SGB=152.744;VDB=0.848302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.5:29335102 chr05:029335102 0 W/29335102-29335102 FN1375-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1318-S.SNP.5:29340049 chr05:029340049 0 W/29340049-29340049 FN1318-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1318-S.SNP.5:29340053 chr05:029340053 0 W/29340053-29340053 FN1318-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN4020-S.SNP.5:29340451 chr05:029340451 0 W/29340451-29340451 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.988427;DP=2492;DP4=1366,1012,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18573e-10;MQSB=0.944371;RPB=0.971146;SGB=69.8961;VDB=0.909751;EFF=UTR_3_PRIME(MODIFIER||457||135|LOC_Os05g51140|protein_coding|CODING|LOC_Os05g51140.1|3|1),UTR_3_PRIME(MODIFIER||457||351|LOC_Os05g51140|protein_coding|CODING|LOC_Os05g51140.2|9|1) FN2591-S.SNP.5:29357068 chr05:029357068 0 W/29357068-29357068 FN2591-S SNP A -> G AC=1;AN=198;BQB=0.0522356;DP=4444;DP4=2333,1814,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20955e-05;MQSB=0.182406;RPB=0.515597;SGB=-15.026;VDB=0.924081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N204S|383|LOC_Os05g51180|protein_coding|CODING|LOC_Os05g51180.1|3|1) FN3970-S.SNP.5:29358072 chr05:029358072 0 W/29358072-29358072 FN3970-S SNP G -> A AC=2;AN=168;BQB=0.623961;DP=2593;DP4=1265,1205,18,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.96506e-21;MQSB=0.93494;RPB=0.837999;SGB=137.672;VDB=0.500178;EFF=INTRON(MODIFIER||||383|LOC_Os05g51180|protein_coding|CODING|LOC_Os05g51180.1|3|1) FN1033-S.SNP.5:29358341 chr05:029358341 0 W/29358341-29358341 FN1033-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os05g51180 hyaluronan/mRNA binding family domain containing protein, expressed SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1020-S.SNP.5:29364868 chr05:029364868 0 W/29364868-29364868 FN1020-S Single Base Substitution T-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1467-S.SNP.5:29366762 chr05:029366762 0 W/29366762-29366762 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2658-S.SNP.5:29369399 chr05:029369399 0 W/29369399-29369399 FN2658-S SNP T -> C AC=1;AN=200;BQB=0.628453;DP=4726;DP4=2299,2208,6,10;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0146001;MQB=0.122751;MQSB=0.714738;RPB=0.553911;SGB=6.27959;VDB=0.95802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I581V|1184|LOC_Os05g51200|protein_coding|CODING|LOC_Os05g51200.1|3|1) FN2645-S.SNP.5:29376754 chr05:029376754 0 W/29376754-29376754 FN2645-S SNP C -> A AC=1;AN=200;BQB=0.247884;DP=4771;DP4=2167,2325,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28705e-14;MQSB=0.956068;RPB=0.928164;SGB=95.7111;VDB=0.0310067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.5:29381450 chr05:029381450 0 W/29381450-29381450 FN1231-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN951-S.SNP.5:29384407 chr05:029384407 0 W/29384407-29384407 FN951-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3730-S.SNP.5:29385537 chr05:029385537 0 W/29385537-29385537 FN3730-S SNP C -> T AC=1;AN=190;BQB=0.906582;DP=2710;DP4=1199,1394,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84986e-14;MQSB=0.992253;RPB=0.992614;SGB=89.4087;VDB=0.38106;EFF=INTERGENIC(MODIFIER||||||||||1) FN-5.SNP.5:29385734 chr05:029385734 0 W/29385734-29385734 FN-5 Single Base Substitution C-A INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN2768-S.SNP.5:29386405 chr05:029386405 0 W/29386405-29386405 FN2768-S SNP T -> C AC=1;AN=198;BQB=0.657966;DP=4088;DP4=1878,1756,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56294e-15;MQSB=0.972507;RPB=0.686309;SGB=104.69;VDB=0.27062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q262R|299|LOC_Os05g51240|protein_coding|CODING|LOC_Os05g51240.1|2|1) FN788-S.SNP.5:29390775 chr05:029390775 0 W/29390775-29390775 FN788-S Single Base Substitution G-T INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1713-S.SNP.5:29401164 chr05:029401164 0 W/29401164-29401164 FN1713-S SNP C -> T AC=2;AN=188;BQB=0.83345;DP=3240;DP4=2002,1159,28,11;HOB=0.0210502;ICB=0.494738;MQ=15;MQ0F=0.15216;MQB=0.898257;MQSB=0.0215546;RPB=0.201753;SGB=-133.118;VDB=0.119176;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G18D|1000|LOC_Os05g51260|protein_coding|CODING|LOC_Os05g51260.1|1|1) FN3858-S.SNP.5:29402946 chr05:029402946 0 W/29402946-29402946 FN3858-S SNP A -> T AC=2;AN=158;BQB=0.942629;DP=2648;DP4=1286,1221,19,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.84674e-14;MQSB=0.992389;RPB=0.71028;SGB=91.3541;VDB=0.446053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.5:29404554 chr05:029404554 0 W/29404554-29404554 FN1652-S Single Base Substitution T-C INTERGENIC Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2645-S.SNP.5:29407442 chr05:029407442 0 W/29407442-29407442 FN2645-S SNP A -> T AC=1;AN=198;BQB=0.982985;DP=4868;DP4=2529,2140,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.01195e-17;MQSB=0.955804;RPB=0.294763;SGB=-6.45336;VDB=0.598589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.5:29408656 chr05:029408656 0 W/29408656-29408656 FN1351-S Single Base Substitution C-T INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1529-S.SNP.5:29409129 chr05:029409129 0 W/29409129-29409129 FN1529-S Single Base Substitution C-T INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2112-S.SNP.5:29409146 chr05:029409146 0 W/29409146-29409146 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.0186891;DP=3965;DP4=1700,2207,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.19618e-05;MQSB=0.958471;RPB=0.521208;SGB=-87.7854;VDB=0.0739848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.5:29416887 chr05:029416887 0 W/29416887-29416887 FN1619-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4234-S.SNP.5:29418044 chr05:029418044 0 W/29418044-29418044 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.917569;DP=1687;DP4=445,1166,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.72112e-06;MQSB=0.999998;RPB=0.700849;SGB=34.5445;VDB=0.863147;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.5:29420973 chr05:029420973 0 W/29420973-29420973 FN-182 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g51290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2278-S.SNP.5:29430359 chr05:029430359 0 W/29430359-29430359 FN2278-S SNP C -> A AC=1;AN=190;BQB=0.00761606;DP=13313;DP4=4930,7490,22,34;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00540825;MQB=1.37596e-08;MQSB=1.226e-13;RPB=0.99997;SGB=67.8201;VDB=0.662183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D74Y|770|LOC_Os05g51300|protein_coding|CODING|LOC_Os05g51300.1|2|1) FN3943-S.SNP.5:29434491 chr05:029434491 0 W/29434491-29434491 FN3943-S SNP C -> T AC=1;AN=168;BQB=0.92229;DP=4137;DP4=1508,2514,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0152284;MQB=0.00195318;MQSB=6.79131e-22;RPB=0.667249;SGB=45.0404;VDB=0.731075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L307F|592|LOC_Os05g51310|protein_coding|CODING|LOC_Os05g51310.1|3|1) FN3294-S.SNP.5:29437539 chr05:029437539 0 W/29437539-29437539 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.990509;DP=3063;DP4=1354,1616,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000326477;MQB=7.44681e-14;MQSB=0.806619;RPB=0.635392;SGB=45.9712;VDB=0.859716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R286Q|1024|LOC_Os05g51320|protein_coding|CODING|LOC_Os05g51320.1|3|1) FN2602-S.SNP.5:29447699 chr05:029447699 0 W/29447699-29447699 FN2602-S SNP T -> A AC=1;AN=198;BQB=0.725537;DP=2967;DP4=1113,1724,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00355867;MQSB=0.346999;RPB=0.923518;SGB=18.5788;VDB=0.188618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.5:29450231 chr05:029450231 0 W/29450231-29450231 FN1431-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g51350 CDR1, putative, expressed SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN3858-S.SNP.5:29454636 chr05:029454636 0 W/29454636-29454636 FN3858-S SNP C -> T AC=2;AN=158;BQB=0.917106;DP=2374;DP4=1100,1112,15,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.73671e-13;MQSB=0.999642;RPB=0.4491;SGB=74.5068;VDB=0.910931;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.5:29465616 chr05:029465616 0 W/29465616-29465616 FN3906-S SNP A -> T AC=2;AN=158;BQB=0.960929;DP=2135;DP4=922,1113,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.08772e-13;MQSB=0.941604;RPB=0.72744;SGB=71.1374;VDB=0.808937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.5:29473392 chr05:029473392 0 W/29473392-29473392 FN1277-S Single Base Substitution T-A INTRON HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3805-S.SNP.5:29480258 chr05:029480258 0 W/29480258-29480258 FN3805-S SNP G -> A AC=1;AN=190;BQB=0.915063;DP=2747;DP4=1172,1476,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24499e-07;MQSB=0.490272;RPB=0.993463;SGB=21.1058;VDB=0.467552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-171.SNP.5:29483414 chr05:029483414 0 W/29483414-29483414 FN-171 Single Base Substitution G-T INTRON HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN530-S.SNP.5:29484051 chr05:029484051 0 W/29484051-29484051 FN530-S Single Base Substitution T-C INTRON HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN2723-S.SNP.5:29486665 chr05:029486665 0 W/29486665-29486665 FN2723-S SNP T -> C AC=1;AN=200;BQB=0.871049;DP=4974;DP4=2374,2410,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.41701e-08;MQSB=0.982914;RPB=0.950857;SGB=58.8698;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN4094-S.SNP.5:29493156 chr05:029493156 0 W/29493156-29493156 FN4094-S SNP G -> T AC=1;AN=182;BQB=0.626257;DP=2642;DP4=1317,1262,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000500078;MQSB=0.998826;RPB=0.933064;SGB=21.5845;VDB=0.915158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q70K|141|LOC_Os05g51430|protein_coding|CODING|LOC_Os05g51430.1|3|1) FN3513-S.SNP.5:29493949 chr05:029493949 0 W/29493949-29493949 FN3513-S SNP T -> A AC=1;AN=188;BQB=0.770741;DP=3446;DP4=1484,1867,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03786e-05;MQSB=0.976753;RPB=0.975359;SGB=48.979;VDB=0.169706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.5:29500625 chr05:029500625 0 W/29500625-29500625 FN2321 SNP T -> A AC=2;AN=192;BQB=0.900599;DP=5093;DP4=2267,2506,27,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.32249e-27;MQSB=0.929086;RPB=0.604611;SGB=164.532;VDB=0.468334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.5:29503581 chr05:029503581 0 W/29503581-29503581 FN3364-S SNP G -> A AC=2;AN=184;BQB=0.807662;DP=3978;DP4=1949,1903,20,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.94309e-24;MQSB=0.966703;RPB=0.995874;SGB=166.309;VDB=0.94343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T137M|428|LOC_Os05g51460|protein_coding|CODING|LOC_Os05g51460.1|1|1) FN1730-S.SNP.5:29504987 chr05:029504987 0 W/29504987-29504987 FN1730-S SNP A -> G AC=1;AN=188;BQB=0.468763;DP=3740;DP4=1894,1794,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55182e-06;MQSB=0.526168;RPB=0.967668;SGB=-60.4458;VDB=0.866298;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.5:29511934 chr05:029511934 0 W/29511934-29511934 FN941-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN941-S.SNP.5:29511936 chr05:029511936 0 W/29511936-29511936 FN941-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3421-S.SNP.5:29522121 chr05:029522121 0 W/29522121-29522121 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.939019;DP=2599;DP4=1258,1274,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.73218e-08;MQSB=0.988296;RPB=0.523764;SGB=48.7425;VDB=0.567407;EFF=INTRON(MODIFIER||||770|LOC_Os05g51490|protein_coding|CODING|LOC_Os05g51490.1|3|1),INTRON(MODIFIER||||769|LOC_Os05g51490|protein_coding|CODING|LOC_Os05g51490.2|3|1) FN416-S.SNP.5:29525553 chr05:029525553 0 W/29525553-29525553 FN416-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os05g51490 SIT4 phosphatase-associated protein domain containing protein, expressed SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN455-S.SNP.5:29527434 chr05:029527434 0 W/29527434-29527434 FN455-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1029-S.SNP.5:29535944 chr05:029535944 0 W/29535944-29535944 FN1029-S Single Base Substitution T-A INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3627-S.SNP.5:29536623 chr05:029536623 0 W/29536623-29536623 FN3627-S SNP C -> T AC=2;AN=190;BQB=0.82226;DP=3052;DP4=1740,1154,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.16368e-16;MQSB=0.917194;RPB=0.996537;SGB=108.296;VDB=0.551312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.5:29536627 chr05:029536627 0 W/29536627-29536627 FN3627-S SNP A -> T AC=2;AN=190;BQB=0.933597;DP=3062;DP4=1762,1163,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.62393e-16;MQSB=0.860184;RPB=0.78033;SGB=56.8601;VDB=0.597924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.5:29541654 chr05:029541654 0 W/29541654-29541654 FN1213-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1497-S.SNP.5:29542343 chr05:029542343 0 W/29542343-29542343 FN1497-S Single Base Substitution C-T INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1465-S.SNP.5:29544141 chr05:029544141 0 W/29544141-29544141 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2593-S.SNP.5:29546303 chr05:029546303 0 W/29546303-29546303 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.955496;DP=3524;DP4=1790,1523,21,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.16737e-15;MQSB=0.915196;RPB=0.0410126;SGB=101.266;VDB=0.644651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S87R|423|LOC_Os05g51520|protein_coding|CODING|LOC_Os05g51520.1|1|1) FN451-S.SNP.5:29551958 chr05:029551958 0 W/29551958-29551958 FN451-S Single Base Substitution G-A INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2379.SNP.5:29554137 chr05:029554137 0 W/29554137-29554137 FN2379 SNP A -> G AC=2;AN=192;BQB=0.455169;DP=4626;DP4=2076,2139,38,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.30818e-36;MQSB=0.334838;RPB=0.992881;SGB=272.897;VDB=0.0180715;EFF=START_GAINED(LOW||||158|LOC_Os05g51540|protein_coding|CODING|LOC_Os05g51540.1|1|1),UTR_5_PRIME(MODIFIER||124||158|LOC_Os05g51540|protein_coding|CODING|LOC_Os05g51540.1|1|1) FN1214-S.SNP.5:29565669 chr05:029565669 0 W/29565669-29565669 FN1214-S Single Base Substitution G-C INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1214-S.SNP.5:29565671 chr05:029565671 0 W/29565671-29565671 FN1214-S Single Base Substitution G-A INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1152-S.SNP.5:29569703 chr05:029569703 0 W/29569703-29569703 FN1152-S Single Base Substitution A-G INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN3537-S.SNP.5:29572892 chr05:029572892 0 W/29572892-29572892 FN3537-S SNP T -> A AC=2;AN=188;BQB=0.957192;DP=2676;DP4=1195,1407,12,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.04747e-13;MQSB=0.98816;RPB=0.889951;SGB=98.9552;VDB=0.553667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q297L|473|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q297L|473|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.2|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q216L|392|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.3|11|1) FN2251-S.SNP.5:29575912 chr05:029575912 0 W/29575912-29575912 FN2251-S SNP C -> A AC=1;AN=190;BQB=0.428215;DP=4821;DP4=2274,2103,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207426;MQB=5.34042e-11;MQSB=0.599241;RPB=0.78053;SGB=80.9724;VDB=0.631145;EFF=UTR_5_PRIME(MODIFIER||1626||392|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.3|1|1),UTR_5_PRIME(MODIFIER||610||473|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.1|1|1),UTR_5_PRIME(MODIFIER||610||473|LOC_Os05g51560|protein_coding|CODING|LOC_Os05g51560.2|1|1) FN3576-S.SNP.5:29576819 chr05:029576819 0 W/29576819-29576819 FN3576-S SNP C -> G AC=1;AN=188;BQB=0.926278;DP=2597;DP4=1620,873,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00038506;MQB=1.62793e-08;MQSB=0.0155892;RPB=0.99965;SGB=58.0655;VDB=0.80552;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.5:29582036 chr05:029582036 0 W/29582036-29582036 FN1085-S Single Base Substitution G-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2619-S.SNP.5:29586516 chr05:029586516 0 W/29586516-29586516 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.89562;DP=4587;DP4=2007,2316,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=5.32085e-07;MQSB=0.957344;RPB=0.990862;SGB=132.261;VDB=0.974291;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.5:29592525 chr05:029592525 0 W/29592525-29592525 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.589662;DP=2823;DP4=1336,1210,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0829e-06;MQSB=0.956929;RPB=0.29219;SGB=-0.550503;VDB=0.399491;EFF=INTRON(MODIFIER||||453|LOC_Os05g51610|protein_coding|CODING|LOC_Os05g51610.1|1|1) FN4180-S.SNP.5:29596857 chr05:029596857 0 W/29596857-29596857 FN4180-S SNP G -> A AC=1;AN=170;BQB=0.978123;DP=2943;DP4=1449,1409,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.41055e-09;MQSB=0.99453;RPB=0.70193;SGB=56.7575;VDB=0.189882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A730V|1098|LOC_Os05g51620|protein_coding|CODING|LOC_Os05g51620.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A661V|1029|LOC_Os05g51620|protein_coding|CODING|LOC_Os05g51620.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A569V|937|LOC_Os05g51620|protein_coding|CODING|LOC_Os05g51620.3|7|1) FN3757-S.SNP.5:29599917 chr05:029599917 0 W/29599917-29599917 FN3757-S SNP T -> G AC=1;AN=190;BQB=0.0730539;DP=2538;DP4=1354,1068,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.46787e-05;MQSB=0.999657;RPB=0.637048;SGB=2.55724;VDB=0.729579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Cca|T116P|1098|LOC_Os05g51620|protein_coding|CODING|LOC_Os05g51620.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Cca|T47P|1029|LOC_Os05g51620|protein_coding|CODING|LOC_Os05g51620.2|1|1) FN3761-S.SNP.5:29601596 chr05:029601596 0 W/29601596-29601596 FN3761-S SNP C -> T AC=1;AN=190;BQB=0.795781;DP=2686;DP4=1537,1071,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.92342e-07;MQSB=0.971281;RPB=0.636467;SGB=39.6545;VDB=0.729579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.5:29609817 chr05:029609817 0 W/29609817-29609817 FN3920-S SNP A -> G AC=1;AN=158;BQB=0.995252;DP=2417;DP4=1108,1181,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.52271e-08;MQSB=0.983485;RPB=0.891039;SGB=37.4429;VDB=0.467553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K60R|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K60R|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.1|2|1) FN3558-S.SNP.5:29609923 chr05:029609923 0 W/29609923-29609923 FN3558-S SNP C -> T AC=2;AN=188;BQB=0.975187;DP=2457;DP4=1153,1231,12,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.18037e-15;MQSB=0.98687;RPB=0.955132;SGB=126.215;VDB=0.190874;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S95|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S95|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.1|2|1) FN2750-S.SNP.5:29612663 chr05:029612663 0 W/29612663-29612663 FN2750-S SNP T -> G AC=1;AN=200;BQB=0.872154;DP=5165;DP4=2515,2372,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.4152e-11;MQSB=0.615249;RPB=0.995186;SGB=29.4849;VDB=0.329102;EFF=INTRON(MODIFIER||||766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.1|7|1),INTRON(MODIFIER||||766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.2|6|1) FN1276-S.SNP.5:29613226 chr05:029613226 0 W/29613226-29613226 FN1276-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3885-S.SNP.5:29614589 chr05:029614589 0 W/29614589-29614589 FN3885-S SNP C -> T AC=1;AN=158;BQB=0.998842;DP=2681;DP4=1308,1238,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.7705e-09;MQSB=0.823726;RPB=0.788489;SGB=64.5449;VDB=0.682835;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D519|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.1|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D519|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.2|9|1) FN2683-S.SNP.5:29615660 chr05:029615660 0 W/29615660-29615660 FN2683-S SNP A -> G AC=2;AN=200;BQB=0.609009;DP=5057;DP4=2171,2553,37,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.91854e-39;MQSB=0.913055;RPB=0.810611;SGB=92.9588;VDB=0.964951;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A675|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.1|11|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A675|766|LOC_Os05g51630|protein_coding|CODING|LOC_Os05g51630.2|10|1) FN2649-S.SNP.5:29621611 chr05:029621611 0 W/29621611-29621611 FN2649-S SNP C -> G AC=2;AN=200;BQB=0.710782;DP=5110;DP4=2592,2170,27,29;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.34822e-23;MQSB=0.198374;RPB=0.775306;SGB=191.687;VDB=0.00239667;EFF=INTRON(MODIFIER||||306|LOC_Os05g51640|protein_coding|CODING|LOC_Os05g51640.1|1|1),INTRON(MODIFIER||||306|LOC_Os05g51640|protein_coding|CODING|LOC_Os05g51640.2|2|1) FN3465-S.SNP.5:29634646 chr05:029634646 0 W/29634646-29634646 FN3465-S SNP G -> A AC=2;AN=184;BQB=0.974159;DP=2886;DP4=1119,1667,13,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.78014e-19;MQSB=0.993632;RPB=0.904988;SGB=157.265;VDB=0.343889;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G218S|354|LOC_Os05g51670|protein_coding|CODING|LOC_Os05g51670.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G218S|324|LOC_Os05g51670|protein_coding|CODING|LOC_Os05g51670.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G155S|291|LOC_Os05g51670|protein_coding|CODING|LOC_Os05g51670.3|4|1) FN2192-S.SNP.5:29637242 chr05:029637242 0 W/29637242-29637242 FN2192-S SNP A -> T AC=2;AN=190;BQB=0.98536;DP=4767;DP4=2347,2046,33,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000209776;MQB=3.37821e-22;MQSB=0.304558;RPB=0.855284;SGB=174.702;VDB=0.776882;EFF=UTR_3_PRIME(MODIFIER||112||247|LOC_Os05g51680|protein_coding|CODING|LOC_Os05g51680.2|1|1),INTRON(MODIFIER||||332|LOC_Os05g51680|protein_coding|CODING|LOC_Os05g51680.1|1|1) FN2715-S.SNP.5:29642874 chr05:029642874 0 W/29642874-29642874 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.82418;DP=4958;DP4=2348,2304,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.39676e-13;MQSB=0.997497;RPB=0.071488;SGB=55.5366;VDB=0.363526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.5:29643954 chr05:029643954 0 W/29643954-29643954 FN3547-S SNP G -> T AC=1;AN=188;BQB=0.91655;DP=2959;DP4=1506,1362,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.81781e-05;MQSB=0.00298978;RPB=0.963626;SGB=48.979;VDB=0.57666;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.5:29652448 chr05:029652448 0 W/29652448-29652448 FN1572-S Single Base Substitution C-T INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN492-S.SNP.5:29655192 chr05:029655192 0 W/29655192-29655192 FN492-S Single Base Substitution T-A INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN492-S.SNP.5:29655193 chr05:029655193 0 W/29655193-29655193 FN492-S Single Base Substitution T-A INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-365.SNP.5:29655508 chr05:029655508 0 W/29655508-29655508 FN-365 Single Base Substitution G-A INTERGENIC HOMO SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN-365.SNP.5:29655509 chr05:029655509 0 W/29655509-29655509 FN-365 Single Base Substitution C-A INTERGENIC HOMO SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. W247-2-1.SNP.5:29658542 chr05:029658542 0 W/29658542-29658542 W247-2-1 Single Base Substitution G-T INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1326-S.SNP.5:29658990 chr05:029658990 0 W/29658990-29658990 FN1326-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3838-S.SNP.5:29659755 chr05:029659755 0 W/29659755-29659755 FN3838-S SNP T -> C AC=1;AN=190;BQB=0.996442;DP=5680;DP4=2455,2938,9,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32697e-16;MQSB=0.998377;RPB=0.541211;SGB=96.5165;VDB=0.748578;EFF=INTRON(MODIFIER||||308|LOC_Os05g51690|protein_coding|CODING|LOC_Os05g51690.1|3|1),INTRON(MODIFIER||||130|LOC_Os05g51690|protein_coding|CODING|LOC_Os05g51690.3|2|1) FN3665-S.SNP.5:29660178 chr05:029660178 0 W/29660178-29660178 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.844085;DP=5536;DP4=2807,2531,22,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01119e-25;MQSB=0.756104;RPB=0.985661;SGB=105.384;VDB=0.118459;EFF=UTR_3_PRIME(MODIFIER||322||308|LOC_Os05g51690|protein_coding|CODING|LOC_Os05g51690.1|4|1),UTR_3_PRIME(MODIFIER||322||130|LOC_Os05g51690|protein_coding|CODING|LOC_Os05g51690.3|3|1) FN3778-S.SNP.5:29675088 chr05:029675088 0 W/29675088-29675088 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.963183;DP=2699;DP4=1418,1176,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.32221e-05;MQSB=0.863206;RPB=0.833927;SGB=35.4339;VDB=0.507605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.5:29676946 chr05:029676946 0 W/29676946-29676946 FN3761-S SNP A -> T AC=1;AN=190;BQB=0.219839;DP=3175;DP4=1485,1548,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000310746;MQSB=0.973229;RPB=0.706583;SGB=28.9929;VDB=0.297961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.5:29682585 chr05:029682585 0 W/29682585-29682585 FN1114-S Single Base Substitution T-A INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3938-S.SNP.5:29682585 chr05:029682585 0 W/29682585-29682585 FN3938-S SNP T -> A AC=1;AN=158;BQB=0.730124;DP=2355;DP4=1327,924,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.8507e-10;MQSB=0.626308;RPB=0.894689;SGB=47.5512;VDB=0.456465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.5:29685310 chr05:029685310 0 W/29685310-29685310 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.999986;DP=4024;DP4=1561,2215,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00124254;MQB=0.000175571;MQSB=0.363731;RPB=0.872296;SGB=24.1541;VDB=0.533311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.5:29686544 chr05:029686544 0 W/29686544-29686544 FN2286 SNP G -> T AC=2;AN=192;BQB=0.313847;DP=4661;DP4=2164,2216,18,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000429092;MQB=3.27127e-17;MQSB=0.923518;RPB=0.983824;SGB=163.319;VDB=0.762526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.5:29686691 chr05:029686691 0 W/29686691-29686691 FN2648-S SNP A -> T AC=1;AN=200;BQB=0.415805;DP=4308;DP4=2019,1626,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232126;MQB=3.70693e-14;MQSB=0.57355;RPB=0.402688;SGB=-42.4225;VDB=0.0830396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.5:29687009 chr05:029687009 0 W/29687009-29687009 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN-153.SNP.5:29687087 chr05:029687087 0 W/29687087-29687087 FN-153 Single Base Substitution G-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2758-S.SNP.5:29699295 chr05:029699295 0 W/29699295-29699295 FN2758-S SNP C -> A AC=1;AN=200;BQB=0.313023;DP=8176;DP4=3029,4590,13,6;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0412182;MQB=0.89656;MQSB=4.84346e-26;RPB=0.231774;SGB=58.2954;VDB=0.302233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R17L|748|LOC_Os05g51760|protein_coding|CODING|LOC_Os05g51760.1|1|1) FN3766-S.SNP.5:29699324 chr05:029699324 0 W/29699324-29699324 FN3766-S SNP G -> A AC=1;AN=190;BQB=0.372244;DP=3783;DP4=1317,2374,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0293418;MQB=0.999865;MQSB=3.71206e-15;RPB=0.28503;SGB=10.3266;VDB=0.830178;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L7|748|LOC_Os05g51760|protein_coding|CODING|LOC_Os05g51760.1|1|1) FN2188-S.SNP.5:29702855 chr05:029702855 0 W/29702855-29702855 FN2188-S SNP C -> T AC=1;AN=190;BQB=1.66287e-14;DP=3201;DP4=1391,1267,43,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00124961;MQB=2.73812e-29;MQSB=0.0589915;RPB=0.0931979;SGB=-902.694;VDB=0.0574328;EFF=INTERGENIC(MODIFIER||||||||||1) FN515-S.SNP.5:29705021 chr05:029705021 0 W/29705021-29705021 FN515-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os05g51770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. 701-3.SNP.5:29706713 chr05:029706713 0 W/29706713-29706713 701-3 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os05g51770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN3628-S.SNP.5:29711684 chr05:029711684 0 W/29711684-29711684 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.954964;DP=2493;DP4=1296,1085,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00681909;MQB=0.0223108;MQSB=1.8659e-36;RPB=0.958018;SGB=26.3271;VDB=0.394191;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.5:29714978 chr05:029714978 0 W/29714978-29714978 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1690-S.SNP.5:29715159 chr05:029715159 0 W/29715159-29715159 FN1690-S SNP T -> G AC=1;AN=188;BQB=0.0413836;DP=3932;DP4=1880,2022,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.02124e-08;MQSB=0.962141;RPB=0.845448;SGB=-38.278;VDB=0.611208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.5:29720898 chr05:029720898 0 W/29720898-29720898 FN3580-S SNP T -> C AC=1;AN=188;BQB=0.982658;DP=2438;DP4=1148,1218,11,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.15344e-07;MQSB=0.839465;RPB=0.773425;SGB=35.9843;VDB=0.106188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.5:29722392 chr05:029722392 0 W/29722392-29722392 FN2141-S SNP G -> T AC=1;AN=168;BQB=0.370292;DP=3597;DP4=1708,1861,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55036e-09;MQSB=0.980895;RPB=0.972297;SGB=-14.9417;VDB=0.91149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.5:29722394 chr05:029722394 0 W/29722394-29722394 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.428176;DP=3646;DP4=1728,1882,17,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32899e-11;MQSB=0.98692;RPB=0.934045;SGB=-64.9298;VDB=0.71881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.5:29746149 chr05:029746149 0 W/29746149-29746149 FN1274-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1274-S.SNP.5:29746150 chr05:029746150 0 W/29746150-29746150 FN1274-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN2691-S.SNP.5:29749055 chr05:029749055 0 W/29749055-29749055 FN2691-S SNP G -> T AC=1;AN=200;BQB=0.99974;DP=4681;DP4=1906,2420,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54239e-06;MQSB=0.858193;RPB=0.708182;SGB=45.0543;VDB=0.280152;EFF=INTRON(MODIFIER||||110|LOC_Os05g51810|protein_coding|CODING|LOC_Os05g51810.1|2|1) FN3573-S.SNP.5:29750582 chr05:029750582 0 W/29750582-29750582 FN3573-S SNP A -> G AC=1;AN=186;BQB=0.832903;DP=796;DP4=78,638,1,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.2597e-05;MQSB=0.766243;RPB=0.891988;SGB=32.6924;VDB=5.1015e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.5:29750809 chr05:029750809 0 W/29750809-29750809 FN2462 SNP G -> A AC=2;AN=200;BQB=0.0431405;DP=3010;DP4=2004,710,25,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.2767e-16;MQSB=0.916613;RPB=0.999241;SGB=-4.03268;VDB=0.77518;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.5:29751068 chr05:029751068 0 W/29751068-29751068 FN930-S Single Base Substitution C-A INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2191-S.SNP.5:29751673 chr05:029751673 0 W/29751673-29751673 FN2191-S SNP G -> A AC=1;AN=190;BQB=0.669945;DP=4424;DP4=1975,2230,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08649e-08;MQSB=0.381352;RPB=0.732327;SGB=21.1058;VDB=0.441075;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.5:29751990 chr05:029751990 0 W/29751990-29751990 FN972-S Single Base Substitution A-T INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-205.SNP.5:29755922 chr05:029755922 0 W/29755922-29755922 FN-205 Single Base Substitution A-T INTRON HET SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2791-S.SNP.5:29761573 chr05:029761573 0 W/29761573-29761573 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.306978;DP=3915;DP4=1982,1673,12,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56963e-06;MQSB=0.936044;RPB=0.0490771;SGB=24.1541;VDB=0.177657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.5:29765779 chr05:029765779 0 W/29765779-29765779 FN4119-S SNP C -> T AC=1;AN=182;BQB=0.953025;DP=2137;DP4=1205,873,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.4395e-06;MQSB=0.226699;RPB=0.591851;SGB=39.6007;VDB=0.429587;EFF=INTRON(MODIFIER||||577|LOC_Os05g51860|protein_coding|CODING|LOC_Os05g51860.1|4|1) FN2283.SNP.5:29772815 chr05:029772815 0 W/29772815-29772815 FN2283 SNP C -> T AC=2;AN=192;BQB=0.488949;DP=4508;DP4=1949,2210,32,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.2748e-37;MQSB=0.948457;RPB=0.902433;SGB=272.897;VDB=0.632116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.5:29773576 chr05:029773576 0 W/29773576-29773576 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.998182;DP=3625;DP4=1559,1665,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.46479e-11;MQSB=0.000723847;RPB=0.605687;SGB=81.7147;VDB=0.729449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.5:29775477 chr05:029775477 0 W/29775477-29775477 FN2375 SNP G -> T AC=1;AN=192;BQB=0.0208212;DP=4456;DP4=2177,2056,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000383495;MQSB=0.388874;RPB=0.516683;SGB=-54.4513;VDB=0.355613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D176Y|503|LOC_Os05g51890|protein_coding|CODING|LOC_Os05g51890.1|2|1) FN3569-S.SNP.5:29776453 chr05:029776453 0 W/29776453-29776453 FN3569-S SNP G -> T AC=1;AN=188;BQB=0.909727;DP=3077;DP4=1229,1795,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0672733;MQB=0.984927;MQSB=0.915428;RPB=0.857583;SGB=39.8925;VDB=0.851509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S501I|503|LOC_Os05g51890|protein_coding|CODING|LOC_Os05g51890.1|2|1) FN880-S.SNP.5:29778658 chr05:029778658 0 W/29778658-29778658 FN880-S Single Base Substitution G-A INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1709-S.SNP.5:29781798 chr05:029781798 0 W/29781798-29781798 FN1709-S SNP C -> T AC=2;AN=188;BQB=0.083449;DP=3485;DP4=1765,1668,22,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.00074e-17;MQSB=0.775081;RPB=0.249035;SGB=79.4854;VDB=0.320742;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.5:29781798 chr05:029781798 0 W/29781798-29781798 FN244-S Single Base Substitution C-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3375-S.SNP.5:29783043 chr05:029783043 0 W/29783043-29783043 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.974116;DP=2792;DP4=1370,1327,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000358166;MQB=1.48793e-05;MQSB=0.978289;RPB=0.951915;SGB=39.699;VDB=0.25953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.5:29786435 chr05:029786435 0 W/29786435-29786435 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.753253;DP=4952;DP4=2179,2459,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.37774e-12;MQSB=0.442503;RPB=0.969443;SGB=-10.4526;VDB=0.375883;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.5:29786772 chr05:029786772 0 W/29786772-29786772 FN4235-S SNP A -> T AC=2;AN=170;BQB=0.716135;DP=2532;DP4=1205,1242,14,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.56667e-13;MQSB=0.989967;RPB=0.977264;SGB=76.1898;VDB=0.757104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.5:29787114 chr05:029787114 0 W/29787114-29787114 FN2625-S SNP T -> A AC=1;AN=200;BQB=0.954118;DP=4835;DP4=2525,2057,16,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.71762e-20;MQSB=0.99969;RPB=0.964965;SGB=68.5625;VDB=0.51866;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.5:29789353 chr05:029789353 0 W/29789353-29789353 FN618-S Single Base Substitution C-T INTRON HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3446-S.SNP.5:29797935 chr05:029797935 0 W/29797935-29797935 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.845024;DP=2703;DP4=1228,1266,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.47958e-05;MQSB=0.159477;RPB=0.166349;SGB=39.2697;VDB=0.312146;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.5:29805689 chr05:029805689 0 W/29805689-29805689 FN4126-S SNP C -> T AC=1;AN=182;BQB=0.150223;DP=3008;DP4=1310,1474,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0129654;MQB=0.0294833;MQSB=0.0861978;RPB=0.826836;SGB=42.6494;VDB=0.893759;EFF=INTRON(MODIFIER||||707|LOC_Os05g51930|protein_coding|CODING|LOC_Os05g51930.1|2|1) FN2551-S.SNP.5:29805864 chr05:029805864 0 W/29805864-29805864 FN2551-S SNP G -> C AC=1;AN=198;BQB=0.281953;DP=3139;DP4=1472,1231,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0130615;MQB=0.00562079;MQSB=0.0075811;RPB=0.904369;SGB=4.56404;VDB=0.575767;EFF=INTRON(MODIFIER||||707|LOC_Os05g51930|protein_coding|CODING|LOC_Os05g51930.1|2|1) FN1230-S.SNP.5:29806932 chr05:029806932 0 W/29806932-29806932 FN1230-S Single Base Substitution C-G INTRON HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN_769-4-1.SNP.5:29807629 chr05:029807629 0 W/29807629-29807629 FN_769-4-1 Single Base Substitution G-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2164-S.SNP.5:29808201 chr05:029808201 0 W/29808201-29808201 FN2164-S SNP G -> A AC=1;AN=168;BQB=0.0555744;DP=3208;DP4=1583,1524,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0187032;MQB=0.000492594;MQSB=0.400468;RPB=0.851343;SGB=-60.2222;VDB=0.654423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.5:29857625 chr05:029857625 0 W/29857625-29857625 FN2269-S SNP A -> C AC=1;AN=190;BQB=0.645209;DP=4628;DP4=2057,2184,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0360847;MQB=2.08294e-05;MQSB=0.143367;RPB=0.982658;SGB=49.1985;VDB=0.243747;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.5:29859800 chr05:029859800 0 W/29859800-29859800 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.999827;DP=2394;DP4=1154,1194,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0104428;MQB=0.812865;MQSB=0.999991;RPB=0.312576;SGB=39.8925;VDB=0.181735;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.5:29864166 chr05:029864166 0 W/29864166-29864166 FN2622-S SNP C -> A AC=1;AN=200;BQB=0.250075;DP=6033;DP4=3180,2545,15,12;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.221283;MQB=0.163771;MQSB=3.09394e-06;RPB=0.576187;SGB=118.737;VDB=0.861852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.5:29866579 chr05:029866579 0 W/29866579-29866579 FN2408 SNP A -> G AC=1;AN=200;BQB=0.308924;DP=4168;DP4=1401,2436,2,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000479846;MQB=2.8664e-05;MQSB=0.941792;RPB=0.984041;SGB=-34.9207;VDB=0.305955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.5:29875405 chr05:029875405 0 W/29875405-29875405 FN3782-S SNP G -> A AC=1;AN=190;BQB=0.72208;DP=5024;DP4=2651,2253,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0780255;MQB=0.122782;MQSB=0.0407438;RPB=0.751904;SGB=50.3161;VDB=0.503602;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.5:29875453 chr05:029875453 0 W/29875453-29875453 FN1585-S Single Base Substitution G-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-141.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN-141 Single Base Substitution T-A INTRON HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-163.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN-163 Single Base Substitution T-A INTRON HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-218.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN-218 Single Base Substitution T-A INTRON HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-294.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN-294 Single Base Substitution T-A INTRON HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN-62.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN-62 Single Base Substitution T-A INTRON HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1392-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN1392-S Single Base Substitution T-A INTRON HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1464-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN1464-S Single Base Substitution T-A INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1665-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN1665-S Single Base Substitution T-A INTRON Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2420.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN2420 SNP T -> A AC=2;AN=200;BQB=0.890653;DP=3323;DP4=1527,1419,21,15;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.00782426;MQB=0.00130818;MQSB=0.000107969;RPB=0.845762;SGB=160.183;VDB=0.22736;EFF=INTRON(MODIFIER||||475|LOC_Os05g52060|protein_coding|CODING|LOC_Os05g52060.1|15|1) FN282-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN282-S Single Base Substitution T-A INTRON HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3528-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN3528-S SNP T -> A AC=1;AN=188;BQB=0.811047;DP=2695;DP4=1394,1162,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0111317;MQB=0.215316;MQSB=0.211503;RPB=0.449307;SGB=58.0655;VDB=0.539527;EFF=INTRON(MODIFIER||||475|LOC_Os05g52060|protein_coding|CODING|LOC_Os05g52060.1|15|1) FN3701-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN3701-S SNP T -> A AC=2;AN=190;BQB=0.945414;DP=2529;DP4=1239,1121,7,4;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.013444;MQB=0.0110108;MQSB=0.024184;RPB=0.934167;SGB=44.5415;VDB=0.665619;EFF=INTRON(MODIFIER||||475|LOC_Os05g52060|protein_coding|CODING|LOC_Os05g52060.1|15|1) FN756-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN756-S Single Base Substitution T-A INTRON HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN911-S.SNP.5:29886601 chr05:029886601 0 W/29886601-29886601 FN911-S Single Base Substitution T-A INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN75-S-S.SNP.5:29889739 chr05:029889739 0 W/29889739-29889739 FN75-S-S SNP T -> A AC=1;AN=190;BQB=0.905784;DP=4413;DP4=1450,2236,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.0777249;MQB=0.961154;MQSB=3.87313e-11;RPB=0.96032;SGB=7.21887;VDB=0.774388;EFF=INTRON(MODIFIER||||475|LOC_Os05g52060|protein_coding|CODING|LOC_Os05g52060.1|6|1) FN1462-S.SNP.5:29889987 chr05:029889987 0 W/29889987-29889987 FN1462-S Single Base Substitution C-T INTRON HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN964-S.SNP.5:29890753 chr05:029890753 0 W/29890753-29890753 FN964-S Single Base Substitution G-A INTRON HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN711-S.SNP.5:29891655 chr05:029891655 0 W/29891655-29891655 FN711-S Single Base Substitution A-T INTRON HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN1060-S.SNP.5:29891791 chr05:029891791 0 W/29891791-29891791 FN1060-S Single Base Substitution T-G INTRON HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2599-S.SNP.5:29891861 chr05:029891861 0 W/29891861-29891861 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.600675;DP=3847;DP4=1934,1564,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0735638;MQB=0.042024;MQSB=0;RPB=0.118135;SGB=-66.8501;VDB=0.716835;EFF=INTRON(MODIFIER||||475|LOC_Os05g52060|protein_coding|CODING|LOC_Os05g52060.1|1|1) FN-84.SNP.5:29895224 chr05:029895224 0 W/29895224-29895224 FN-84 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os05g52070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN3681-S.SNP.5:29895659 chr05:029895659 0 W/29895659-29895659 FN3681-S SNP A -> T AC=1;AN=190;BQB=0.504259;DP=2775;DP4=1487,1186,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0162162;MQB=0.121506;MQSB=0.00791709;RPB=0.995357;SGB=32.5467;VDB=0.504569;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L1487I|1671|LOC_Os05g52070|protein_coding|CODING|LOC_Os05g52070.1|17|1) FN2606-S.SNP.5:29896192 chr05:029896192 0 W/29896192-29896192 FN2606-S SNP C -> G AC=1;AN=198;BQB=0.15154;DP=4140;DP4=1982,2008,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00869565;MQB=0.000179801;MQSB=0.999593;RPB=0.823086;SGB=-3.4115;VDB=0.955501;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tCg|W1412S|1671|LOC_Os05g52070|protein_coding|CODING|LOC_Os05g52070.1|16|1) FN2583-S.SNP.5:29898627 chr05:029898627 0 W/29898627-29898627 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.729206;DP=5062;DP4=2599,2215,7,5;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0517582;MQB=0.148987;MQSB=4.25866e-18;RPB=0.220841;SGB=49.6594;VDB=0.361024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K600N|1671|LOC_Os05g52070|protein_coding|CODING|LOC_Os05g52070.1|16|1) FN2631-S.SNP.5:29902267 chr05:029902267 0 W/29902267-29902267 FN2631-S SNP C -> G AC=1;AN=200;BQB=0.20473;DP=4367;DP4=1824,2248,19,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0249599;MQB=5.94016e-08;MQSB=0.000252305;RPB=0.41341;SGB=155.578;VDB=0.328783;EFF=INTRON(MODIFIER||||1671|LOC_Os05g52070|protein_coding|CODING|LOC_Os05g52070.1|12|1) FN_N1-151-7.SNP.5:29902267 chr05:029902267 0 W/29902267-29902267 FN_N1-151-7 Single Base Substitution C-G HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN4184-S.SNP.5:29907288 chr05:029907288 0 W/29907288-29907288 FN4184-S SNP T -> C AC=1;AN=170;BQB=0.540865;DP=8019;DP4=3831,2530,41,32;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0461404;MQB=0.000985411;MQSB=8.25854e-21;RPB=4.35536e-10;SGB=-1849.36;VDB=0.346427;EFF=INTRON(MODIFIER||||1671|LOC_Os05g52070|protein_coding|CODING|LOC_Os05g52070.1|4|1) FN2117-S.SNP.5:29916623 chr05:029916623 0 W/29916623-29916623 FN2117-S SNP G -> A AC=1;AN=168;BQB=0.238573;DP=2467;DP4=1179,1227,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0360762;MQB=0.139044;MQSB=4.58391e-37;RPB=0.319754;SGB=-14.5109;VDB=0.652478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.5:29917910 chr05:029917910 0 W/29917910-29917910 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN975-S.SNP.5:29918193 chr05:029918193 0 W/29918193-29918193 FN975-S Single Base Substitution G-T INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN732-S.SNP.5:29920696 chr05:029920696 0 W/29920696-29920696 FN732-S Single Base Substitution C-A INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2348.SNP.5:29922296 chr05:029922296 0 W/29922296-29922296 FN2348 SNP G -> A AC=1;AN=192;BQB=0.925175;DP=3634;DP4=1683,1621,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00990644;MQB=5.64761e-06;MQSB=0.69007;RPB=0.917365;SGB=68.2948;VDB=0.775332;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.5:29922948 chr05:029922948 0 W/29922948-29922948 FN1334-S Single Base Substitution G-A INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2426.SNP.5:29928254 chr05:029928254 0 W/29928254-29928254 FN2426 SNP G -> T AC=2;AN=200;BQB=0.25573;DP=3386;DP4=1602,1271,32,49;HOB=0.0198;ICB=0.495051;MQ=21;MQ0F=0.207029;MQB=2.94673e-07;MQSB=0.375706;RPB=0.000558102;SGB=-735.683;VDB=0.000431499;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.5:29956508 chr05:029956508 0 W/29956508-29956508 FN461-S Single Base Substitution G-C INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. W470-2-1.SNP.5:29956876 chr05:029956876 0 W/29956876-29956876 W470-2-1 Single Base Substitution T-C INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN876-S.SNP.6:4736 chr06:000004736 0 W/4736-4736 FN876-S Single Base Substitution T-C INTRON HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN_777-2-1.SNP.6:7859 chr06:000007859 0 W/7859-7859 FN_777-2-1 Single Base Substitution G-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1435-S.SNP.6:7985 chr06:000007985 0 W/7985-7985 FN1435-S Single Base Substitution G-A INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN509-S.SNP.6:11718 chr06:000011718 0 W/11718-11718 FN509-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g01030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN4144-S.SNP.6:20045 chr06:000020045 0 W/20045-20045 FN4144-S SNP C -> A AC=2;AN=170;BQB=0.911555;DP=2370;DP4=1265,969,13,7;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00843882;MQB=0.00493812;MQSB=0.876558;RPB=0.29296;SGB=83.4133;VDB=0.0964469;EFF=SPLICE_SITE_DONOR(HIGH||||610|LOC_Os06g01040|protein_coding|CODING|LOC_Os06g01040.1|12|1),INTRON(MODIFIER||||610|LOC_Os06g01040|protein_coding|CODING|LOC_Os06g01040.1|12|1);LOF=(LOC_Os06g01040|LOC_Os06g01040|1|1.00) FN3732-S.SNP.6:22719 chr06:000022719 0 W/22719-22719 FN3732-S SNP G -> A AC=1;AN=190;BQB=0.451696;DP=4385;DP4=2481,1477,18,9;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.311973;MQB=0.0884471;MQSB=9.56876e-38;RPB=0.630387;SGB=-71.8882;VDB=0.12491;EFF=INTRON(MODIFIER||||610|LOC_Os06g01040|protein_coding|CODING|LOC_Os06g01040.1|5|1) FN2561-S.SNP.6:29850 chr06:000029850 0 W/29850-29850 FN2561-S SNP A -> G AC=1;AN=188;BQB=0.710698;DP=3207;DP4=1364,1545,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0180854;MQB=0.115715;MQSB=0;RPB=0.927579;SGB=-16.8114;VDB=0.18368;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.6:60259 chr06:000060259 0 W/60259-60259 FN497-S Single Base Substitution A-G INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN434-S.SNP.6:68290 chr06:000068290 0 W/68290-68290 FN434-S Single Base Substitution G-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN4001-S.SNP.6:90608 chr06:000090608 0 W/90608-90608 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.976239;DP=2479;DP4=976,1409,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0322711;MQB=0.0560368;MQSB=6.50383e-10;RPB=0.96971;SGB=52.1728;VDB=0.104618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.6:94280 chr06:000094280 0 W/94280-94280 FN3772-S SNP T -> A AC=2;AN=190;BQB=0.958091;DP=2635;DP4=1559,940,12,8;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.30754e-07;MQSB=0.31745;RPB=0.99565;SGB=60.9777;VDB=0.574652;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.6:96471 chr06:000096471 0 W/96471-96471 FN851-S Single Base Substitution T-A INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN851-S.SNP.6:96472 chr06:000096472 0 W/96472-96472 FN851-S Single Base Substitution G-T INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2203-S.SNP.6:101260 chr06:000101260 0 W/101260-101260 FN2203-S SNP G -> A AC=1;AN=190;BQB=0.991084;DP=4601;DP4=2161,2098,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.65464e-06;MQSB=0.494667;RPB=0.527838;SGB=23.6597;VDB=0.934414;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R79|831|LOC_Os06g01090|protein_coding|CODING|LOC_Os06g01090.1|1|1) FN2484.SNP.6:102123 chr06:000102123 0 W/102123-102123 FN2484 SNP G -> C AC=2;AN=200;BQB=0.987803;DP=4469;DP4=1890,2246,14,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83506e-17;MQSB=0.927914;RPB=0.422333;SGB=101.557;VDB=0.767144;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.6:104491 chr06:000104491 0 W/104491-104491 FN4260-S SNP G -> T AC=1;AN=170;BQB=0.90778;DP=2641;DP4=1201,1348,14,17;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00302916;MQB=1.70764e-15;MQSB=0.237928;RPB=0.89086;SGB=132.282;VDB=0.315993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.6:112388 chr06:000112388 0 W/112388-112388 FN3504-S SNP G -> A AC=1;AN=188;BQB=0.213171;DP=2749;DP4=870,1484,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00109131;MQB=1.40125e-06;MQSB=2.75633e-12;RPB=0.750349;SGB=-13.3699;VDB=0.816436;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F215|328|LOC_Os06g01130|protein_coding|CODING|LOC_Os06g01130.1|2|1) FN3626-S.SNP.6:114084 chr06:000114084 0 W/114084-114084 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.82708;DP=3187;DP4=1462,1509,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.08962e-10;MQSB=0.789598;RPB=0.24366;SGB=67.3108;VDB=0.787351;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.6:114449 chr06:000114449 0 W/114449-114449 FN1718-S SNP T -> C AC=1;AN=188;BQB=0.922528;DP=2197;DP4=1268,899,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.45767e-05;MQSB=0.536829;RPB=0.921993;SGB=-2.17824;VDB=0.113567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.6:115349 chr06:000115349 0 W/115349-115349 FN3357-S SNP C -> T AC=1;AN=184;BQB=0.971936;DP=3177;DP4=1763,1334,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0138495;MQB=7.87383e-06;MQSB=0.000663195;RPB=0.953616;SGB=48.7425;VDB=0.204027;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.6:121978 chr06:000121978 0 W/121978-121978 CW-631-3-1 Single Base Substitution G-A INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN559-S.SNP.6:137747 chr06:000137747 0 W/137747-137747 FN559-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g01170 PHD-finger domain containing protein, expressed SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN-409.SNP.6:140931 chr06:000140931 0 W/140931-140931 FN-409 Single Base Substitution G-C INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1697-S.SNP.6:143738 chr06:000143738 0 W/143738-143738 FN1697-S SNP G -> T AC=1;AN=188;BQB=0.487978;DP=3235;DP4=1922,1281,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.41882e-07;MQSB=0.846787;RPB=0.661511;SGB=58.0655;VDB=0.230481;EFF=INTRON(MODIFIER||||338|LOC_Os06g01200|protein_coding|CODING|LOC_Os06g01200.1|1|1) FN3942-S.SNP.6:144295 chr06:000144295 0 W/144295-144295 FN3942-S SNP T -> G AC=1;AN=168;BQB=0.975741;DP=2341;DP4=978,1240,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.23772e-08;MQSB=0.999519;RPB=0.999969;SGB=31.3172;VDB=0.637461;EFF=INTRON(MODIFIER||||338|LOC_Os06g01200|protein_coding|CODING|LOC_Os06g01200.1|1|1) FN2547-S.SNP.6:153959 chr06:000153959 0 W/153959-153959 FN2547-S SNP C -> T AC=1;AN=198;BQB=0.875602;DP=4305;DP4=1966,2192,6,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.31847e-05;MQSB=0.884575;RPB=0.996128;SGB=26.5745;VDB=0.953496;EFF=INTRON(MODIFIER||||392|LOC_Os06g01230|protein_coding|CODING|LOC_Os06g01230.1|5|1),INTRON(MODIFIER||||359|LOC_Os06g01230|protein_coding|CODING|LOC_Os06g01230.2|4|1) FN3378-S.SNP.6:153959 chr06:000153959 0 W/153959-153959 FN3378-S SNP C -> T AC=2;AN=184;BQB=0.406366;DP=2900;DP4=1237,1545,14,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.09019e-13;MQSB=0.979246;RPB=0.892423;SGB=143.7;VDB=0.853862;EFF=INTRON(MODIFIER||||392|LOC_Os06g01230|protein_coding|CODING|LOC_Os06g01230.1|5|1),INTRON(MODIFIER||||359|LOC_Os06g01230|protein_coding|CODING|LOC_Os06g01230.2|4|1) FN510-S.SNP.6:153959 chr06:000153959 0 W/153959-153959 FN510-S Single Base Substitution C-T INTRON HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2305.SNP.6:158931 chr06:000158931 0 W/158931-158931 FN2305 SNP C -> T AC=2;AN=192;BQB=0.642329;DP=1973;DP4=463,1248,4,8;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.000506842;MQB=0.0127604;MQSB=1.08745e-25;RPB=0.798087;SGB=49.2105;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.6:163629 chr06:000163629 0 W/163629-163629 FN2216-S SNP C -> T AC=1;AN=190;BQB=0.0727996;DP=4214;DP4=1801,2091,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000237304;MQB=2.71978e-05;MQSB=0.795908;RPB=0.832409;SGB=10.8904;VDB=0.369485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A110V|518|LOC_Os06g01250|protein_coding|CODING|LOC_Os06g01250.1|1|1) FN2216-S.SNP.6:163637 chr06:000163637 0 W/163637-163637 FN2216-S SNP C -> T AC=1;AN=190;BQB=0.918881;DP=4136;DP4=1828,2037,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000483559;MQB=8.34012e-05;MQSB=0.877452;RPB=0.993403;SGB=26.3271;VDB=0.568173;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R113*|518|LOC_Os06g01250|protein_coding|CODING|LOC_Os06g01250.1|1|1);LOF=(LOC_Os06g01250|LOC_Os06g01250|1|1.00);NMD=(LOC_Os06g01250|LOC_Os06g01250|1|1.00) FN2348.SNP.6:172775 chr06:000172775 0 W/172775-172775 FN2348 SNP A -> G AC=2;AN=192;BQB=0.999995;DP=4900;DP4=2329,2238,23,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.13242e-31;MQSB=0.953281;RPB=0.567586;SGB=128.924;VDB=0.578936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K377R|502|LOC_Os06g01260|protein_coding|CODING|LOC_Os06g01260.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K202R|327|LOC_Os06g01260|protein_coding|CODING|LOC_Os06g01260.2|4|1) FN1060-S.SNP.6:183937 chr06:000183937 0 W/183937-183937 FN1060-S Single Base Substitution C-T INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN3657-S.SNP.6:185095 chr06:000185095 0 W/185095-185095 FN3657-S SNP T -> C AC=2;AN=190;BQB=0.397919;DP=2465;DP4=1108,1219,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01946e-10;MQSB=0.949003;RPB=0.160753;SGB=68.0854;VDB=0.914786;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.6:185206 chr06:000185206 0 W/185206-185206 FN-137 Single Base Substitution A-G INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2419.SNP.6:188493 chr06:000188493 0 W/188493-188493 FN2419 SNP C -> T AC=1;AN=200;BQB=0.836277;DP=5435;DP4=2709,2458,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.08883e-19;MQSB=0.748601;RPB=0.977255;SGB=112.373;VDB=0.484408;EFF=INTRON(MODIFIER||||611|LOC_Os06g01304|protein_coding|CODING|LOC_Os06g01304.1|5|1) FN2419.SNP.6:192163 chr06:000192163 0 W/192163-192163 FN2419 SNP G -> A AC=1;AN=200;BQB=0.403892;DP=4487;DP4=2229,1947,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90948e-13;MQSB=0.823172;RPB=0.783469;SGB=27.1468;VDB=0.602952;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.6:198009 chr06:000198009 0 W/198009-198009 FN664-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g01320 chromo domain containing protein, expressed SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN2430.SNP.6:198773 chr06:000198773 0 W/198773-198773 FN2430 SNP C -> T AC=1;AN=200;BQB=0.963795;DP=4864;DP4=2329,2247,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94738e-09;MQSB=0.815326;RPB=0.983066;SGB=58.8698;VDB=0.580506;EFF=INTRON(MODIFIER||||2133|LOC_Os06g01320|protein_coding|CODING|LOC_Os06g01320.1|9|1) FN2445.SNP.6:200223 chr06:000200223 0 W/200223-200223 FN2445 SNP G -> C AC=1;AN=200;BQB=0.732033;DP=4744;DP4=2178,2196,2,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.98687e-07;MQSB=0.965607;RPB=0.846672;SGB=-15.5309;VDB=0.252077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E583D|2133|LOC_Os06g01320|protein_coding|CODING|LOC_Os06g01320.1|11|1) FN2445.SNP.6:200227 chr06:000200227 0 W/200227-200227 FN2445 SNP G -> A AC=1;AN=200;BQB=0.998958;DP=4745;DP4=2244,2210,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06526e-05;MQSB=0.980287;RPB=0.988499;SGB=13.8539;VDB=0.256378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D585N|2133|LOC_Os06g01320|protein_coding|CODING|LOC_Os06g01320.1|11|1) FN627-S.SNP.6:206498 chr06:000206498 0 W/206498-206498 FN627-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g01320 chromo domain containing protein, expressed SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN627-S.SNP.6:206499 chr06:000206499 0 W/206499-206499 FN627-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN972-S.SNP.6:210662 chr06:000210662 0 W/210662-210662 FN972-S Single Base Substitution T-C INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN677-S.SNP.6:211434 chr06:000211434 0 W/211434-211434 FN677-S Single Base Substitution C-T INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3690-S.SNP.6:215359 chr06:000215359 0 W/215359-215359 FN3690-S SNP A -> G AC=2;AN=190;BQB=0.995168;DP=2880;DP4=1437,1279,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.21097e-14;MQSB=0.998326;RPB=0.611954;SGB=94.6341;VDB=0.0372564;EFF=UTR_3_PRIME(MODIFIER||42||470|LOC_Os06g01360|protein_coding|CODING|LOC_Os06g01360.1|9|1),UTR_3_PRIME(MODIFIER||42||401|LOC_Os06g01360|protein_coding|CODING|LOC_Os06g01360.2|8|1) FN480-S.SNP.6:216269 chr06:000216269 0 W/216269-216269 FN480-S Single Base Substitution T-C INTRON HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN2703-S.SNP.6:216931 chr06:000216931 0 W/216931-216931 FN2703-S SNP T -> A AC=1;AN=200;BQB=0.173026;DP=5003;DP4=2341,2290,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.3834e-14;MQSB=0.88486;RPB=0.222687;SGB=-165.664;VDB=0.00241936;EFF=INTRON(MODIFIER||||470|LOC_Os06g01360|protein_coding|CODING|LOC_Os06g01360.1|3|1),INTRON(MODIFIER||||401|LOC_Os06g01360|protein_coding|CODING|LOC_Os06g01360.2|2|1) FN3700-S.SNP.6:226540 chr06:000226540 0 W/226540-226540 FN3700-S SNP T -> C AC=1;AN=190;BQB=0.998005;DP=3035;DP4=1210,1613,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.64285e-11;MQSB=0.998871;RPB=0.959767;SGB=28.7675;VDB=0.514004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.6:234206 chr06:000234206 0 W/234206-234206 FN2244-S SNP C -> G AC=2;AN=190;BQB=0.999558;DP=4353;DP4=2240,1880,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.98213e-12;MQSB=0.683052;RPB=0.995964;SGB=90.0802;VDB=0.880005;EFF=INTRON(MODIFIER||||1068|LOC_Os06g01400|protein_coding|CODING|LOC_Os06g01400.1|1|1) FN1322-S.SNP.6:241828 chr06:000241828 0 W/241828-241828 FN1322-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g01400 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3815-S.SNP.6:244413 chr06:000244413 0 W/244413-244413 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.929777;DP=2579;DP4=1124,1322,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02722e-06;MQSB=0.997752;RPB=0.92234;SGB=21.8853;VDB=0.988625;EFF=UTR_3_PRIME(MODIFIER||51||1068|LOC_Os06g01400|protein_coding|CODING|LOC_Os06g01400.1|34|1) FN-220.SNP.6:249835 chr06:000249835 0 W/249835-249835 FN-220 Single Base Substitution A-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2181-S.SNP.6:255820 chr06:000255820 0 W/255820-255820 FN2181-S SNP C -> T AC=1;AN=190;BQB=0.537694;DP=3965;DP4=1717,1931,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000504414;MQB=3.05774e-06;MQSB=0.591381;RPB=0.271654;SGB=15.9981;VDB=0.168008;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1400*|1917|LOC_Os06g01420|protein_coding|CODING|LOC_Os06g01420.1|3|1) FN619-S.SNP.6:258239 chr06:000258239 0 W/258239-258239 FN619-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g01430 retrotransposon protein, putative, unclassified, expressed SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN758-S.SNP.6:266905 chr06:000266905 0 W/266905-266905 FN758-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g01440 integral membrane protein, putative, expressed SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN-181.SNP.6:270727 chr06:000270727 0 W/270727-270727 FN-181 Single Base Substitution C-T INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1093-S.SNP.6:276040 chr06:000276040 0 W/276040-276040 FN1093-S Single Base Substitution G-A INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1446-S.SNP.6:278195 chr06:000278195 0 W/278195-278195 FN1446-S Single Base Substitution A-G INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2220-S.SNP.6:294979 chr06:000294979 0 W/294979-294979 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.541077;DP=5364;DP4=2112,2631,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000186428;MQB=4.6844e-10;MQSB=0.530224;RPB=0.994711;SGB=-12.6681;VDB=0.971652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.6:295981 chr06:000295981 0 W/295981-295981 FN1297-S Single Base Substitution A-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-194.SNP.6:310236 chr06:000310236 0 W/310236-310236 FN-194 Single Base Substitution C-T INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN952-S.SNP.6:313007 chr06:000313007 0 W/313007-313007 FN952-S Single Base Substitution C-T INTRON HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3859-S.SNP.6:315420 chr06:000315420 0 W/315420-315420 FN3859-S SNP C -> T AC=1;AN=158;BQB=0.999281;DP=3104;DP4=1178,1780,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00128866;MQB=0.000128506;MQSB=1.31504e-05;RPB=0.890317;SGB=55.806;VDB=0.680107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.6:317197 chr06:000317197 0 W/317197-317197 FN3610-S SNP G -> A AC=1;AN=190;BQB=0.999986;DP=2802;DP4=1575,1130,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0902926;MQB=0.902862;MQSB=1.19861e-07;RPB=0.59335;SGB=58.2031;VDB=0.260844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.6:326151 chr06:000326151 0 W/326151-326151 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.986088;DP=3465;DP4=2028,1321,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0002886;MQB=3.17079e-07;MQSB=0.145201;RPB=0.903946;SGB=56.8786;VDB=0.486226;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.6:326460 chr06:000326460 0 W/326460-326460 FN2192-S SNP G -> A AC=2;AN=190;BQB=0.736156;DP=2935;DP4=1261,1197,23,6;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0517888;MQB=0.97285;MQSB=0.936233;RPB=0.205965;SGB=126.511;VDB=0.00477777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.6:326593 chr06:000326593 0 W/326593-326593 FN2296 SNP G -> T AC=2;AN=192;BQB=0.261785;DP=4606;DP4=1870,2084,24,26;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.0102041;MQB=2.23622e-21;MQSB=0.45319;RPB=0.782608;SGB=168.097;VDB=0.564875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.6:326594 chr06:000326594 0 W/326594-326594 FN2296 SNP C -> T AC=2;AN=192;BQB=0.996201;DP=4634;DP4=2194,2149,21,26;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.012732;MQB=2.37337e-19;MQSB=3.64932e-06;RPB=0.989227;SGB=208.963;VDB=0.480461;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.6:335541 chr06:000335541 0 W/335541-335541 FN912-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g01560 retrotransposon protein, putative, unclassified, expressed SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN-88.SNP.6:353562 chr06:000353562 0 W/353562-353562 FN-88 Single Base Substitution T-C INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN3912-S.SNP.6:364089 chr06:000364089 0 W/364089-364089 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.475416;DP=2350;DP4=1209,1049,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.07394e-05;MQSB=0.999606;RPB=0.713803;SGB=-2.02218;VDB=0.620916;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.6:364167 chr06:000364167 0 W/364167-364167 FN4240-S SNP G -> C AC=2;AN=170;BQB=0.992768;DP=2349;DP4=1069,1183,15,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.97692e-23;MQSB=0.988721;RPB=0.899945;SGB=163.381;VDB=0.228164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.6:373487 chr06:000373487 0 W/373487-373487 FN2468 SNP C -> T AC=1;AN=200;BQB=0.203145;DP=4954;DP4=2377,2316,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201857;MQB=6.36753e-11;MQSB=0.906202;RPB=0.912289;SGB=51.0851;VDB=0.801689;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P113|550|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P113|463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P26|463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.3|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P113|550|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.5|6|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P26|463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.6|4|1) FN4022-S.SNP.6:373688 chr06:000373688 0 W/373688-373688 FN4022-S SNP A -> T AC=1;AN=168;BQB=0.936298;DP=2942;DP4=1469,1364,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.62488e-08;MQSB=0.957825;RPB=0.293183;SGB=52.1728;VDB=0.273837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S82R|550|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S82R|463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S82R|550|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.5|5|1),UTR_5_PRIME(MODIFIER||16||463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.3|4|1),UTR_5_PRIME(MODIFIER||16||463|LOC_Os06g01630|protein_coding|CODING|LOC_Os06g01630.6|3|1) FN521-S.SNP.6:375475 chr06:000375475 0 W/375475-375475 FN521-S Single Base Substitution A-G INTERGENIC HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN521-S.SNP.6:375480 chr06:000375480 0 W/375480-375480 FN521-S Single Base Substitution A-T INTERGENIC HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3532-S.SNP.6:381220 chr06:000381220 0 W/381220-381220 FN3532-S SNP C -> A AC=1;AN=188;BQB=0.45321;DP=2872;DP4=1620,1166,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93852e-06;MQSB=0.867097;RPB=0.256913;SGB=62.6088;VDB=0.223769;EFF=SPLICE_SITE_REGION(LOW||||720|LOC_Os06g01640|protein_coding|CODING|LOC_Os06g01640.1|9|1),INTRON(MODIFIER||||720|LOC_Os06g01640|protein_coding|CODING|LOC_Os06g01640.1|9|1) FN266-S.SNP.6:384324 chr06:000384324 0 W/384324-384324 FN266-S Single Base Substitution T-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1522-S.SNP.6:395185 chr06:000395185 0 W/395185-395185 FN1522-S Single Base Substitution C-G INTRON HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1363-S.SNP.6:406659 chr06:000406659 0 W/406659-406659 FN1363-S Single Base Substitution G-A INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN780-S.SNP.6:407264 chr06:000407264 0 W/407264-407264 FN780-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1444-S.SNP.6:410664 chr06:000410664 0 W/410664-410664 FN1444-S Single Base Substitution T-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN2496.SNP.6:410891 chr06:000410891 0 W/410891-410891 FN2496 SNP G -> A AC=2;AN=200;BQB=0.969229;DP=4569;DP4=2087,2149,18,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.0649e-19;MQSB=0.863019;RPB=0.692618;SGB=81.5883;VDB=0.746254;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.6:422159 chr06:000422159 0 W/422159-422159 FN4105-S SNP T -> G AC=1;AN=182;BQB=0.975547;DP=3189;DP4=1476,1637,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.25811e-08;MQSB=0.986898;RPB=0.307333;SGB=39.1386;VDB=0.522795;EFF=INTRON(MODIFIER||||302|LOC_Os06g01720|protein_coding|CODING|LOC_Os06g01720.1|1|1) FN-295.SNP.6:444168 chr06:000444168 0 W/444168-444168 FN-295 Single Base Substitution A-T INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN791-S.SNP.6:446464 chr06:000446464 0 W/446464-446464 FN791-S Single Base Substitution G-C INTRON HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3733-S.SNP.6:448122 chr06:000448122 0 W/448122-448122 FN3733-S SNP C -> T AC=2;AN=190;BQB=0.674182;DP=1354;DP4=539,733,3,5;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.0226856;MQSB=0.000631974;RPB=0.997617;SGB=30.8803;VDB=0.552214;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.6:456619 chr06:000456619 0 W/456619-456619 FN1667-S SNP T -> C AC=2;AN=188;BQB=0.999995;DP=1741;DP4=741,929,11,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.16818e-10;MQSB=0.999265;RPB=0.436303;SGB=46.4225;VDB=0.746722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F311S|441|LOC_Os06g01790|protein_coding|CODING|LOC_Os06g01790.1|5|1) FN3980-S.SNP.6:464581 chr06:000464581 0 W/464581-464581 FN3980-S SNP A -> T AC=2;AN=168;BQB=0.567537;DP=3130;DP4=1360,1612,7,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.48335e-06;MQSB=0.747831;RPB=0.901014;SGB=27.0464;VDB=0.214913;EFF=INTRON(MODIFIER||||152|LOC_Os06g01800|protein_coding|CODING|LOC_Os06g01800.1|4|1) FN1484-S.SNP.6:474483 chr06:000474483 0 W/474483-474483 FN1484-S Single Base Substitution A-G INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2386.SNP.6:479116 chr06:000479116 0 W/479116-479116 FN2386 SNP A -> G AC=1;AN=192;BQB=0.824253;DP=5187;DP4=2614,2174,25,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00019279;MQB=2.6194e-22;MQSB=0.98803;RPB=0.867896;SGB=85.3296;VDB=0.543829;EFF=UTR_3_PRIME(MODIFIER||554||294|LOC_Os06g01840|protein_coding|CODING|LOC_Os06g01840.2|6|1),UTR_3_PRIME(MODIFIER||246||363|LOC_Os06g01840|protein_coding|CODING|LOC_Os06g01840.1|6|1) FN3829-S.SNP.6:485552 chr06:000485552 0 W/485552-485552 FN3829-S SNP A -> T AC=1;AN=190;BQB=0.948788;DP=2281;DP4=1075,1119,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.63703e-05;MQSB=0.999423;RPB=0.837143;SGB=35.4339;VDB=0.342281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.6:486406 chr06:000486406 0 W/486406-486406 FN2445 SNP G -> A AC=1;AN=200;BQB=0.946401;DP=4660;DP4=2248,2146,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0667e-14;MQSB=0.954517;RPB=0.988472;SGB=76.3213;VDB=0.629116;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.6:499964 chr06:000499964 0 W/499964-499964 FN495-S Single Base Substitution C-T INTRON HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3681-S.SNP.6:507939 chr06:000507939 0 W/507939-507939 FN3681-S SNP G -> A AC=1;AN=190;BQB=0.877409;DP=3044;DP4=1584,1323,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.427398;MQB=0.252358;MQSB=0.935516;RPB=0.932933;SGB=58.2031;VDB=0.772667;EFF=INTRON(MODIFIER||||213|LOC_Os06g01890|protein_coding|CODING|LOC_Os06g01890.1|2|1) FN417-S.SNP.6:512605 chr06:000512605 0 W/512605-512605 FN417-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g01920 expansin precursor, putative, expressed SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1158-S.SNP.6:514819 chr06:000514819 0 W/514819-514819 FN1158-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3518-S.SNP.6:526240 chr06:000526240 0 W/526240-526240 FN3518-S SNP A -> G AC=2;AN=188;BQB=0.968319;DP=4463;DP4=2065,2213,23,27;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00537755;MQB=2.63289e-17;MQSB=0.0328475;RPB=0.650732;SGB=221.624;VDB=0.945328;EFF=INTRON(MODIFIER||||530|LOC_Os06g01934|protein_coding|CODING|LOC_Os06g01934.1|1|1) FN3786-S.SNP.6:528317 chr06:000528317 0 W/528317-528317 FN3786-S SNP C -> T AC=1;AN=190;BQB=0.731089;DP=3077;DP4=1515,1395,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000324992;MQB=4.01071e-05;MQSB=0.558863;RPB=0.982439;SGB=-3.65821;VDB=0.350065;EFF=INTRON(MODIFIER||||530|LOC_Os06g01934|protein_coding|CODING|LOC_Os06g01934.1|1|1) FN2233-S.SNP.6:532828 chr06:000532828 0 W/532828-532828 FN2233-S SNP C -> T AC=2;AN=190;BQB=0.01873;DP=5087;DP4=2093,2489,7,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.11882e-07;MQSB=0.000577116;RPB=0.850184;SGB=-14.8836;VDB=0.673906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.6:539081 chr06:000539081 0 W/539081-539081 FN-329 Single Base Substitution T-G INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1566-S.SNP.6:547998 chr06:000547998 0 W/547998-547998 FN1566-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g01972 auxin-induced protein 5NG4, putative, expressed SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN-265.SNP.6:562529 chr06:000562529 0 W/562529-562529 FN-265 Single Base Substitution G-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2249-S.SNP.6:577368 chr06:000577368 0 W/577368-577368 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.990273;DP=3950;DP4=1645,1849,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.47486e-06;MQSB=0.0448331;RPB=0.989439;SGB=53.6492;VDB=0.471997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.6:583385 chr06:000583385 0 W/583385-583385 FN2312 SNP C -> T AC=1;AN=192;BQB=0.970844;DP=4092;DP4=1191,2634,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.33523e-06;MQSB=0.86778;RPB=0.995344;SGB=23.7852;VDB=0.915919;EFF=INTRON(MODIFIER||||506|LOC_Os06g02019|protein_coding|CODING|LOC_Os06g02019.1|1|1) FN864-S.SNP.6:589856 chr06:000589856 0 W/589856-589856 FN864-S Single Base Substitution T-C INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2403.SNP.6:600827 chr06:000600827 0 W/600827-600827 FN2403 SNP C -> T AC=1;AN=200;BQB=0.99921;DP=4544;DP4=2292,1912,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27704e-11;MQSB=0.988063;RPB=0.35916;SGB=47.7211;VDB=0.0595618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R434C|536|LOC_Os06g02054|protein_coding|CODING|LOC_Os06g02054.1|4|1) FN-130.SNP.6:601875 chr06:000601875 0 W/601875-601875 FN-130 Single Base Substitution C-A INTERGENIC HET SNo: 130, Mutant_ID: FN-130, Generation: M2, Mutations: 30, Genes: 61, Seed availability: Yes. FN2587-S.SNP.6:608731 chr06:000608731 0 W/608731-608731 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.989554;DP=4179;DP4=2079,1884,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00263221;MQB=1.99629e-06;MQSB=0.835641;RPB=0.94257;SGB=40.149;VDB=0.329867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.6:612871 chr06:000612871 0 W/612871-612871 FN1102-S Single Base Substitution G-A INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3345-S.SNP.6:613764 chr06:000613764 0 W/613764-613764 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.987907;DP=3102;DP4=1491,1481,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.9342e-07;MQSB=0.923877;RPB=0.448099;SGB=39.699;VDB=0.721915;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.6:614898 chr06:000614898 0 W/614898-614898 W23-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-71.SNP.6:615166 chr06:000615166 0 W/615166-615166 FN-71 Single Base Substitution C-G INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1667-S.SNP.6:616296 chr06:000616296 0 W/616296-616296 FN1667-S SNP C -> T AC=2;AN=188;BQB=0.34346;DP=3148;DP4=1686,1411,17,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000317662;MQB=1.02318e-15;MQSB=0.923714;RPB=0.976795;SGB=-5.76375;VDB=0.437703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.6:616301 chr06:000616301 0 W/616301-616301 FN2280-S SNP A -> G AC=1;AN=190;BQB=0.544992;DP=4821;DP4=2191,2250,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97929e-07;MQSB=0.818658;RPB=0.491509;SGB=23.6597;VDB=0.833905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.6:617408 chr06:000617408 0 W/617408-617408 FN1068-S Single Base Substitution G-T INTRON HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2152-S.SNP.6:634635 chr06:000634635 0 W/634635-634635 FN2152-S SNP T -> C AC=1;AN=168;BQB=0.920459;DP=3431;DP4=1525,1875,3,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.24206e-08;MQSB=0.815267;RPB=0.983906;SGB=38.1788;VDB=0.696731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T855A|867|LOC_Os06g02130|protein_coding|CODING|LOC_Os06g02130.1|9|1),UTR_3_PRIME(MODIFIER||1683||625|LOC_Os06g02130|protein_coding|CODING|LOC_Os06g02130.2|8|1) FN963-S.SNP.6:636948 chr06:000636948 0 W/636948-636948 FN963-S Single Base Substitution C-A INTRON HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN-328.SNP.6:641038 chr06:000641038 0 W/641038-641038 FN-328 Single Base Substitution G-A INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3860-S.SNP.6:642603 chr06:000642603 0 W/642603-642603 FN3860-S SNP A -> T AC=1;AN=158;BQB=0.920975;DP=2324;DP4=1155,1069,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.00559e-09;MQSB=0.998103;RPB=0.70681;SGB=44.1818;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.6:644525 chr06:000644525 0 W/644525-644525 FN791-S Single Base Substitution C-T INTRON HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN463-S.SNP.6:662214 chr06:000662214 0 W/662214-662214 FN463-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g02180 CSLD2 - cellulose synthase-like family D, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN576-S.SNP.6:669955 chr06:000669955 0 W/669955-669955 FN576-S Single Base Substitution G-A INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN2454.SNP.6:687282 chr06:000687282 0 W/687282-687282 FN2454 SNP G -> T AC=2;AN=200;BQB=0.967884;DP=4573;DP4=2094,2221,31,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.87559e-26;MQSB=0.342793;RPB=0.97502;SGB=195.292;VDB=0.424871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.6:692328 chr06:000692328 0 W/692328-692328 FN2411 SNP C -> T AC=1;AN=200;BQB=0.349019;DP=4959;DP4=2277,2280,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.84662e-08;MQSB=0.681918;RPB=0.377531;SGB=3.06925;VDB=0.914477;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.6:695248 chr06:000695248 0 W/695248-695248 FN-114 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g02220 MTA/SAH nucleosidase, putative, expressed SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3694-S.SNP.6:700293 chr06:000700293 0 W/700293-700293 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.879385;DP=2732;DP4=1315,1328,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66705e-05;MQSB=0.97772;RPB=0.833645;SGB=18.3316;VDB=0.519034;EFF=INTRON(MODIFIER||||261|LOC_Os06g02240|protein_coding|CODING|LOC_Os06g02240.1|2|1) FN1727-S.SNP.6:702264 chr06:000702264 0 W/702264-702264 FN1727-S SNP A -> G AC=1;AN=188;BQB=0.277415;DP=3385;DP4=1699,1552,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.96143e-10;MQSB=0.94838;RPB=0.00850049;SGB=-70.6427;VDB=0.391835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.6:702389 chr06:000702389 0 W/702389-702389 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.97902;DP=4919;DP4=2141,2455,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31378e-14;MQSB=0.91421;RPB=0.898127;SGB=54.3062;VDB=0.688239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.6:704172 chr06:000704172 0 W/704172-704172 FN2347 SNP C -> T AC=1;AN=192;BQB=0.567481;DP=5131;DP4=2433,2450,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.8879e-16;MQSB=0.867474;RPB=0.609559;SGB=62.2505;VDB=0.905284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.6:708850 chr06:000708850 0 W/708850-708850 FN3764-S SNP C -> G AC=2;AN=190;BQB=0.479994;DP=2348;DP4=1157,1117,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.44986e-14;MQSB=0.963803;RPB=0.504534;SGB=82.301;VDB=0.800135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3090-S.SNP.6:712581 chr06:000712581 0 W/712581-712581 FN3090-S SNP A -> G AC=2;AN=184;BQB=0.922385;DP=2561;DP4=1168,1256,8,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000780945;MQB=2.44189e-15;MQSB=0.131992;RPB=0.999687;SGB=22.0202;VDB=0.634479;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.6:724767 chr06:000724767 0 W/724767-724767 FN497-S Single Base Substitution A-T INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN-154.SNP.6:733556 chr06:000733556 0 W/733556-733556 FN-154 Single Base Substitution G-A INTERGENIC HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN882-S.SNP.6:736499 chr06:000736499 0 W/736499-736499 FN882-S Single Base Substitution C-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2175-S.SNP.6:737098 chr06:000737098 0 W/737098-737098 FN2175-S SNP C -> A AC=1;AN=168;BQB=0.304019;DP=4119;DP4=2016,2051,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.63065e-11;MQSB=0.990599;RPB=0.305657;SGB=-10.2027;VDB=0.620355;EFF=INTERGENIC(MODIFIER||||||||||1) FN4099-S.SNP.6:737898 chr06:000737898 0 W/737898-737898 FN4099-S SNP G -> A AC=1;AN=182;BQB=0.915229;DP=2745;DP4=1243,1391,9,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.28832e-09;MQSB=0.993113;RPB=0.576399;SGB=53.1331;VDB=0.135519;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.6:740118 chr06:000740118 0 W/740118-740118 FN-286 Single Base Substitution T-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2282.SNP.6:752451 chr06:000752451 0 W/752451-752451 FN2282 SNP G -> C AC=1;AN=192;BQB=0.848383;DP=4665;DP4=2222,2166,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.14207e-09;MQSB=0.0544116;RPB=0.932308;SGB=54.0374;VDB=0.0435545;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.6:754378 chr06:000754378 0 W/754378-754378 FN-114 Single Base Substitution G-A INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2611-S.SNP.6:755389 chr06:000755389 0 W/755389-755389 FN2611-S SNP G -> T AC=1;AN=200;BQB=0.495344;DP=4086;DP4=1803,2062,27,40;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06978e-33;MQSB=0.904046;RPB=0.271028;SGB=297.347;VDB=0.317039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.6:761447 chr06:000761447 0 W/761447-761447 FN3592-S SNP C -> T AC=1;AN=188;BQB=0.787066;DP=2957;DP4=1515,1382,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.04453e-09;MQSB=0.968224;RPB=0.0735174;SGB=58.0655;VDB=0.185218;EFF=INTRON(MODIFIER||||1180|LOC_Os06g02304|protein_coding|CODING|LOC_Os06g02304.1|6|1) FN3592-S.SNP.6:761448 chr06:000761448 0 W/761448-761448 FN3592-S SNP T -> C AC=1;AN=188;BQB=0.896649;DP=2969;DP4=1513,1356,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.01172e-10;MQSB=0.988602;RPB=0.0872735;SGB=67.1521;VDB=0.175954;EFF=INTRON(MODIFIER||||1180|LOC_Os06g02304|protein_coding|CODING|LOC_Os06g02304.1|6|1) FN4325-S.SNP.6:774167 chr06:000774167 0 W/774167-774167 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.979921;DP=2430;DP4=1116,1249,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.52573e-10;MQSB=0.912996;RPB=0.999563;SGB=65.6427;VDB=0.22877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.6:776249 chr06:000776249 0 W/776249-776249 FN1071-S Single Base Substitution T-A INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN417-S.SNP.6:779293 chr06:000779293 0 W/779293-779293 FN417-S Single Base Substitution T-C INTRON HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1310-S.SNP.6:782244 chr06:000782244 0 W/782244-782244 FN1310-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1057-S.SNP.6:783859 chr06:000783859 0 W/783859-783859 FN1057-S Single Base Substitution C-T INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3564-S.SNP.6:790329 chr06:000790329 0 W/790329-790329 FN3564-S SNP A -> C AC=1;AN=188;BQB=0.513322;DP=2582;DP4=1183,1331,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.02873e-09;MQSB=0.997825;RPB=0.311301;SGB=89.8686;VDB=0.296812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1486-S.SNP.6:803599 chr06:000803599 0 W/803599-803599 FN1486-S Single Base Substitution G-A INTERGENIC HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN714-S.SNP.6:812527 chr06:000812527 0 W/812527-812527 FN714-S Single Base Substitution A-G INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3815-S.SNP.6:824207 chr06:000824207 0 W/824207-824207 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.933741;DP=2678;DP4=1148,1415,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.5446e-06;MQSB=0.942036;RPB=0.758767;SGB=21.8853;VDB=0.909714;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.6:835149 chr06:000835149 0 W/835149-835149 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.973622;DP=2517;DP4=1126,1303,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.68942e-10;MQSB=0.964863;RPB=0.473531;SGB=61.2001;VDB=0.923739;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.6:846389 chr06:000846389 0 W/846389-846389 FN-332 Single Base Substitution A-G INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-353.SNP.6:848944 chr06:000848944 0 W/848944-848944 FN-353 Single Base Substitution T-C INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1750-S.SNP.6:859215 chr06:000859215 0 W/859215-859215 FN1750-S SNP G -> A AC=2;AN=188;BQB=0.89024;DP=2783;DP4=1227,1494,12,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.5992e-16;MQSB=0.897974;RPB=0.544674;SGB=-3.59057;VDB=0.82915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3533-S.SNP.6:863461 chr06:000863461 0 W/863461-863461 FN3533-S SNP G -> T AC=1;AN=188;BQB=0.8449;DP=2778;DP4=1316,1389,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.6158e-07;MQSB=0.748767;RPB=0.75819;SGB=39.5276;VDB=0.593996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.6:877708 chr06:000877708 0 W/877708-877708 FN2188-S SNP A -> G AC=1;AN=190;BQB=0.863495;DP=5147;DP4=2518,2145,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.24989e-12;MQSB=0.412773;RPB=0.676698;SGB=-74.7804;VDB=0.722241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L206P|370|LOC_Os06g02540|protein_coding|CODING|LOC_Os06g02540.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L207P|371|LOC_Os06g02540|protein_coding|CODING|LOC_Os06g02540.1|4|1) FN3976-S.SNP.6:882365 chr06:000882365 0 W/882365-882365 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.393556;DP=2494;DP4=1227,1183,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.1197e-07;MQSB=0.930959;RPB=0.0184512;SGB=27.0464;VDB=0.368413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.6:885004 chr06:000885004 0 W/885004-885004 FN2435 SNP A -> C AC=1;AN=200;BQB=0.805086;DP=5062;DP4=2380,2325,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.80228e-14;MQSB=0.989195;RPB=0.965055;SGB=83.5316;VDB=0.722086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.6:885322 chr06:000885322 0 W/885322-885322 FN2476 SNP T -> C AC=2;AN=200;BQB=0.999962;DP=5039;DP4=2345,2419,20,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.5231e-23;MQSB=0.90178;RPB=0.867605;SGB=206.235;VDB=0.602205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.6:888968 chr06:000888968 0 W/888968-888968 FN1456-S Single Base Substitution G-A INTRON Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN4020-S.SNP.6:898821 chr06:000898821 0 W/898821-898821 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.905609;DP=2656;DP4=1190,1351,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.25736e-12;MQSB=0.994812;RPB=0.823772;SGB=65.6253;VDB=0.332573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.6:901964 chr06:000901964 0 W/901964-901964 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.926601;DP=2818;DP4=1348,1351,13,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.18384e-09;MQSB=0.983483;RPB=0.637771;SGB=77.6532;VDB=0.181439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.6:902432 chr06:000902432 0 W/902432-902432 FN2784-S SNP C -> A AC=1;AN=198;BQB=0.977348;DP=4331;DP4=1898,2202,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.9053e-14;MQSB=0.992011;RPB=0.834057;SGB=55.2955;VDB=0.807555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.6:905966 chr06:000905966 0 W/905966-905966 FN1197-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g02570 syntaxin, putative, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-335.SNP.6:907564 chr06:000907564 0 W/907564-907564 FN-335 Single Base Substitution G-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1032-S.SNP.6:917378 chr06:000917378 0 W/917378-917378 FN1032-S Single Base Substitution T-A INTRON HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4064-S.SNP.6:930472 chr06:000930472 0 W/930472-930472 FN4064-S SNP T -> C AC=2;AN=168;BQB=0.937207;DP=2720;DP4=1181,1411,8,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.06335e-10;MQSB=0.717402;RPB=0.89444;SGB=58.7637;VDB=0.25676;EFF=INTRON(MODIFIER||||442|LOC_Os06g02620|protein_coding|CODING|LOC_Os06g02620.1|6|1) FN-215.SNP.6:931777 chr06:000931777 0 W/931777-931777 FN-215 Single Base Substitution C-T INTRON HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-215.SNP.6:931778 chr06:000931778 0 W/931778-931778 FN-215 Single Base Substitution C-T INTRON HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-103.SNP.6:933715 chr06:000933715 0 W/933715-933715 FN-103 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g02630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2223-S.SNP.6:936846 chr06:000936846 0 W/936846-936846 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.35424;DP=4993;DP4=2097,2634,9,26;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31733e-21;MQSB=0.944508;RPB=0.95822;SGB=74.7373;VDB=0.552756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.6:936854 chr06:000936854 0 W/936854-936854 FN2223-S SNP A -> T AC=1;AN=190;BQB=0.808553;DP=4963;DP4=2033,2516,9,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.98939e-21;MQSB=0.69438;RPB=0.742514;SGB=-3.80607;VDB=0.582815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.6:938723 chr06:000938723 0 W/938723-938723 FN1559-S Single Base Substitution A-G INTRON Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN-108.SNP.6:943530 chr06:000943530 0 W/943530-943530 FN-108 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g02650 retrotransposon protein, putative, unclassified, expressed SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN2121-S.SNP.6:947961 chr06:000947961 0 W/947961-947961 FN2121-S SNP C -> A AC=1;AN=168;BQB=0.239354;DP=1890;DP4=1172,644,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.62439e-05;MQSB=0.971812;RPB=0.817523;SGB=2.75988;VDB=0.647939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A2D|159|LOC_Os06g02660|protein_coding|CODING|LOC_Os06g02660.1|1|1) FN2435.SNP.6:965620 chr06:000965620 0 W/965620-965620 FN2435 SNP T -> A AC=1;AN=200;BQB=0.94268;DP=4789;DP4=2442,2028,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20882e-16;MQSB=0.774698;RPB=0.933125;SGB=118.737;VDB=0.893112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.6:967171 chr06:000967171 0 W/967171-967171 FN3536-S SNP A -> G AC=2;AN=188;BQB=0.998378;DP=2467;DP4=1207,1177,13,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.09092e-13;MQSB=0.869195;RPB=0.980516;SGB=64.3306;VDB=0.547388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S164P|336|LOC_Os06g02700|protein_coding|CODING|LOC_Os06g02700.1|2|1) FN3345-S.SNP.6:970104 chr06:000970104 0 W/970104-970104 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.607421;DP=2682;DP4=1597,826,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5349e-08;MQSB=0.851672;RPB=0.848552;SGB=-16.8012;VDB=0.838639;EFF=INTRON(MODIFIER||||336|LOC_Os06g02700|protein_coding|CODING|LOC_Os06g02700.1|1|1) FN735-S.SNP.6:973047 chr06:000973047 0 W/973047-973047 FN735-S Single Base Substitution G-A INTRON HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN3567-S.SNP.6:981014 chr06:000981014 0 W/981014-981014 FN3567-S SNP A -> G AC=2;AN=188;BQB=0.808616;DP=2502;DP4=1211,1163,22,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.87582e-21;MQSB=0.999848;RPB=0.449058;SGB=170.433;VDB=0.311038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.6:985207 chr06:000985207 0 W/985207-985207 FN3382-S SNP A -> C AC=2;AN=184;BQB=0.998504;DP=2612;DP4=1601,865,4,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000382848;MQB=1.0188e-06;MQSB=0.15823;RPB=0.0865789;SGB=44.2207;VDB=0.412316;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.6:987707 chr06:000987707 0 W/987707-987707 FN406-S Single Base Substitution A-G INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN1075-S.SNP.6:994243 chr06:000994243 0 W/994243-994243 FN1075-S Single Base Substitution T-C INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2398.SNP.6:994243 chr06:000994243 0 W/994243-994243 FN2398 SNP T -> C AC=1;AN=200;BQB=0.0163148;DP=2031;DP4=748,907,8,5;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000492368;MQB=0.00334037;MQSB=0.938757;RPB=0.489225;SGB=-51.3364;VDB=0.0960375;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.6:994243 chr06:000994243 0 W/994243-994243 FN3899-S SNP T -> C AC=2;AN=158;BQB=0.184293;DP=1626;DP4=818,581,8,8;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.000615006;MQB=8.26237e-06;MQSB=0.521687;RPB=0.620975;SGB=-98.3599;VDB=0.950646;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.6:994243 chr06:000994243 0 W/994243-994243 FN589-S Single Base Substitution T-C INTERGENIC HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN854-S.SNP.6:994243 chr06:000994243 0 W/994243-994243 FN854-S Single Base Substitution T-C INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3715-S.SNP.6:994255 chr06:000994255 0 W/994255-994255 FN3715-S SNP G -> A AC=2;AN=190;BQB=0.960675;DP=1290;DP4=660,530,12,4;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=9.99976e-05;MQSB=0.987731;RPB=0.35469;SGB=46.7622;VDB=0.51626;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.6:994685 chr06:000994685 0 W/994685-994685 FN-223 Single Base Substitution T-C INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN354-S.SNP.6:995520 chr06:000995520 0 W/995520-995520 FN354-S Single Base Substitution C-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN1551-S.SNP.6:995786 chr06:000995786 0 W/995786-995786 FN1551-S Single Base Substitution C-T INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2140-S.SNP.6:1014775 chr06:001014775 0 W/1014775-1014775 FN2140-S SNP G -> T AC=2;AN=168;BQB=0.624414;DP=2065;DP4=1323,692,24,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000484261;MQB=5.98042e-16;MQSB=1.4341e-05;RPB=0.281984;SGB=96.5026;VDB=0.067601;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.6:1027341 chr06:001027341 0 W/1027341-1027341 FN428-S Single Base Substitution G-C INTERGENIC HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1097-S.SNP.6:1033911 chr06:001033911 0 W/1033911-1033911 FN1097-S Single Base Substitution C-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN473-S.SNP.6:1035024 chr06:001035024 0 W/1035024-1035024 FN473-S Single Base Substitution C-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN784-S.SNP.6:1039101 chr06:001039101 0 W/1039101-1039101 FN784-S Single Base Substitution G-A INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2185-S.SNP.6:1040530 chr06:001040530 0 W/1040530-1040530 FN2185-S SNP G -> A AC=2;AN=190;BQB=0.411527;DP=4436;DP4=2036,2024,26,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.06291e-23;MQSB=0.773561;RPB=0.408308;SGB=178.256;VDB=0.555892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V172I|818|LOC_Os06g02830|protein_coding|CODING|LOC_Os06g02830.1|1|1) FN2791-S.SNP.6:1043120 chr06:001043120 0 W/1043120-1043120 FN2791-S SNP A -> T AC=1;AN=188;BQB=0.957071;DP=4074;DP4=1993,1836,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.76368e-14;MQSB=0.806064;RPB=0.954839;SGB=83.2905;VDB=0.0439579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.6:1043435 chr06:001043435 0 W/1043435-1043435 FN3332-S SNP G -> T AC=1;AN=184;BQB=0.925692;DP=2860;DP4=1185,1569,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.84248e-08;MQSB=0.999437;RPB=0.949562;SGB=62.3078;VDB=0.722387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.6:1054906 chr06:001054906 0 W/1054906-1054906 FN3380-S SNP G -> C AC=1;AN=184;BQB=0.815909;DP=3086;DP4=1477,1524,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70803e-12;MQSB=0.952418;RPB=0.757218;SGB=35.884;VDB=0.197836;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S68|176|LOC_Os06g02870|protein_coding|CODING|LOC_Os06g02870.1|2|1) FN2489.SNP.6:1055924 chr06:001055924 0 W/1055924-1055924 FN2489 SNP C -> T AC=1;AN=200;BQB=0.999844;DP=5154;DP4=2589,2307,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.85012e-08;MQSB=0.996904;RPB=0.963146;SGB=33.0593;VDB=0.249604;EFF=INTRON(MODIFIER||||176|LOC_Os06g02870|protein_coding|CODING|LOC_Os06g02870.1|1|1) FN3374-S.SNP.6:1057674 chr06:001057674 0 W/1057674-1057674 FN3374-S SNP G -> A AC=1;AN=184;BQB=0.977019;DP=2572;DP4=1049,1391,7,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.0753e-12;MQSB=0.572903;RPB=0.797911;SGB=98.4821;VDB=0.794671;EFF=SPLICE_SITE_DONOR(HIGH||||790|LOC_Os06g02880|protein_coding|CODING|LOC_Os06g02880.1|3|1),INTRON(MODIFIER||||790|LOC_Os06g02880|protein_coding|CODING|LOC_Os06g02880.1|3|1);LOF=(LOC_Os06g02880|LOC_Os06g02880|1|1.00) FN1358-S.SNP.6:1058053 chr06:001058053 0 W/1058053-1058053 FN1358-S Single Base Substitution C-A INTRON HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. W426-1-1.SNP.6:1060450 chr06:001060450 0 W/1060450-1060450 W426-1-1 Single Base Substitution G-T INTRON HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN761-S.SNP.6:1070495 chr06:001070495 0 W/1070495-1070495 FN761-S Single Base Substitution G-T INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3382-S.SNP.6:1071541 chr06:001071541 0 W/1071541-1071541 FN3382-S SNP C -> T AC=2;AN=184;BQB=0.800232;DP=3424;DP4=1356,1951,14,29;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.83394e-21;MQSB=0.99894;RPB=0.652693;SGB=188.918;VDB=0.217602;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I143|159|LOC_Os06g02910|protein_coding|CODING|LOC_Os06g02910.1|1|1) FN4201-S.SNP.6:1072319 chr06:001072319 0 W/1072319-1072319 FN4201-S SNP C -> A AC=1;AN=170;BQB=0.304895;DP=2052;DP4=1099,880,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.65186e-05;MQSB=0.996641;RPB=0.851857;SGB=61.2001;VDB=0.532361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.6:1072584 chr06:001072584 0 W/1072584-1072584 FN-241 Single Base Substitution C-T INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. W721-2-1.SNP.6:1085086 chr06:001085086 0 W/1085086-1085086 W721-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2313.SNP.6:1087364 chr06:001087364 0 W/1087364-1087364 FN2313 SNP T -> C AC=1;AN=192;BQB=0.00118031;DP=5052;DP4=2448,2302,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58582e-06;MQSB=0.775385;RPB=0.975502;SGB=39.78;VDB=0.842563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.6:1087913 chr06:001087913 0 W/1087913-1087913 FN1566-S Single Base Substitution C-G INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN-191.SNP.6:1092711 chr06:001092711 0 W/1092711-1092711 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1478-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN1478-S Single Base Substitution G-A INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1535-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN1535-S Single Base Substitution G-A INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1735-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN1735-S SNP G -> A AC=1;AN=188;BQB=0.906002;DP=2997;DP4=1562,1375,26,10;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.464464;MQB=0.182679;MQSB=0;RPB=0.963549;SGB=-125.748;VDB=0.542157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN2147-S SNP G -> A AC=2;AN=168;BQB=0.000101816;DP=3113;DP4=1687,1381,21,6;HOB=0.0235261;ICB=0.494119;MQ=21;MQ0F=0.448442;MQB=0.0666926;MQSB=0;RPB=0.903912;SGB=-42.92;VDB=0.642851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.698937;DP=5254;DP4=2198,2712,29,14;HOB=5.54017e-05;ICB=0.000111386;MQ=18;MQ0F=0.504378;MQB=0.0191721;MQSB=0;RPB=0.225518;SGB=142.717;VDB=0.467991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN3794-S SNP G -> A AC=2;AN=190;BQB=0.972797;DP=2320;DP4=1152,1073,13,6;HOB=0.020831;ICB=0.494793;MQ=21;MQ0F=0.425862;MQB=0.154198;MQSB=0;RPB=0.776661;SGB=80.9724;VDB=0.981926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.40396;DP=2179;DP4=1092,968,13,6;HOB=8.01154e-05;ICB=0.000161245;MQ=22;MQ0F=0.413492;MQB=0.257673;MQSB=0;RPB=0.976748;SGB=30.927;VDB=0.819407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.6:1107683 chr06:001107683 0 W/1107683-1107683 FN4110-S SNP G -> A AC=2;AN=182;BQB=0.99969;DP=2743;DP4=1306,1329,30,3;HOB=0.0217365;ICB=0.494567;MQ=21;MQ0F=0.448414;MQB=0.000555979;MQSB=0;RPB=0.994767;SGB=105.845;VDB=0.141435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.6:1111677 chr06:001111677 0 W/1111677-1111677 FN2472 SNP T -> G AC=2;AN=200;BQB=0.911576;DP=4818;DP4=2327,1999,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.19186e-27;MQSB=0.562055;RPB=0.971763;SGB=57.645;VDB=0.928771;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.6:1111946 chr06:001111946 0 W/1111946-1111946 FN550-S Single Base Substitution G-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN859-S.SNP.6:1119751 chr06:001119751 0 W/1119751-1119751 FN859-S Single Base Substitution T-A INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2549-S.SNP.6:1120901 chr06:001120901 0 W/1120901-1120901 FN2549-S SNP G -> A AC=1;AN=188;BQB=0.671722;DP=4141;DP4=1944,1957,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18907e-06;MQSB=0.982877;RPB=0.961838;SGB=29.3637;VDB=0.421703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.6:1138962 chr06:001138962 0 W/1138962-1138962 FN1094-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-107.SNP.6:1140837 chr06:001140837 0 W/1140837-1140837 FN-107 Single Base Substitution G-T INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3844-S.SNP.6:1141680 chr06:001141680 0 W/1141680-1141680 FN3844-S SNP G -> A AC=2;AN=190;BQB=0.949581;DP=2650;DP4=1129,1389,6,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45403e-12;MQSB=0.941044;RPB=0.948452;SGB=85.5263;VDB=0.345799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.6:1141878 chr06:001141878 0 W/1141878-1141878 FN3566-S SNP A -> T AC=1;AN=188;BQB=0.940892;DP=3213;DP4=1609,1308,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75647e-10;MQSB=0.997914;RPB=0.99178;SGB=16.3413;VDB=0.161604;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.6:1143053 chr06:001143053 0 W/1143053-1143053 FN1643-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g03090 expressed protein SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1643-S.SNP.6:1143055 chr06:001143055 0 W/1143055-1143055 FN1643-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g03090 expressed protein SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1570-S.SNP.6:1145605 chr06:001145605 0 W/1145605-1145605 FN1570-S Single Base Substitution A-C INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2166-S.SNP.6:1146163 chr06:001146163 0 W/1146163-1146163 FN2166-S SNP A -> C AC=2;AN=168;BQB=0.974367;DP=2789;DP4=1663,1073,20,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.95412e-15;MQSB=0.962613;RPB=0.972607;SGB=-9.7719;VDB=0.716493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M176L|181|LOC_Os06g03110|protein_coding|CODING|LOC_Os06g03110.1|1|1) FN2166-S.SNP.6:1146164 chr06:001146164 0 W/1146164-1146164 FN2166-S SNP T -> A AC=2;AN=168;BQB=0.459661;DP=2772;DP4=1658,1066,19,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19632e-14;MQSB=0.949282;RPB=0.979088;SGB=24.2221;VDB=0.717987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M176K|181|LOC_Os06g03110|protein_coding|CODING|LOC_Os06g03110.1|1|1) FN1473-S.SNP.6:1146684 chr06:001146684 0 W/1146684-1146684 FN1473-S Single Base Substitution G-A INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN3885-S.SNP.6:1147755 chr06:001147755 0 W/1147755-1147755 FN3885-S SNP A -> G AC=2;AN=158;BQB=0.920651;DP=2452;DP4=1243,1127,23,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.65518e-23;MQSB=0.941411;RPB=0.95074;SGB=160.673;VDB=0.805184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.6:1152088 chr06:001152088 0 W/1152088-1152088 FN1037-S Single Base Substitution T-A INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN-5.SNP.6:1158031 chr06:001158031 0 W/1158031-1158031 FN-5 Single Base Substitution T-A INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN-5.SNP.6:1158035 chr06:001158035 0 W/1158035-1158035 FN-5 Single Base Substitution G-T INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN484-S.SNP.6:1158351 chr06:001158351 0 W/1158351-1158351 FN484-S Single Base Substitution G-A INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN4202-S.SNP.6:1161299 chr06:001161299 0 W/1161299-1161299 FN4202-S SNP C -> A AC=1;AN=170;BQB=0.924285;DP=2629;DP4=1245,1289,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05597e-13;MQSB=0.930665;RPB=0.10048;SGB=79.6325;VDB=0.0332506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.6:1161717 chr06:001161717 0 W/1161717-1161717 FN2686-S SNP G -> T AC=1;AN=200;BQB=0.398224;DP=4868;DP4=2129,2460,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000205423;MQB=0.000990437;MQSB=0.669592;RPB=0.993588;SGB=29.4541;VDB=0.357216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.6:1168333 chr06:001168333 0 W/1168333-1168333 FN3694-S SNP C -> T AC=2;AN=190;BQB=0.914736;DP=2278;DP4=1046,1092,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.65296e-14;MQSB=0.726051;RPB=0.716204;SGB=82.301;VDB=0.0574027;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.6:1170068 chr06:001170068 0 W/1170068-1170068 FN865-S Single Base Substitution A-G INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1549-S.SNP.6:1171966 chr06:001171966 0 W/1171966-1171966 FN1549-S Single Base Substitution T-C INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3549-S.SNP.6:1175596 chr06:001175596 0 W/1175596-1175596 FN3549-S SNP C -> T AC=2;AN=188;BQB=0.991251;DP=3182;DP4=1296,1790,6,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.23966e-13;MQSB=0.604178;RPB=0.908683;SGB=108.042;VDB=0.911803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.6:1176712 chr06:001176712 0 W/1176712-1176712 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.989346;DP=3159;DP4=1701,1372,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00126622;MQB=2.51085e-07;MQSB=0.760546;RPB=0.880388;SGB=57.786;VDB=0.62157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.6:1177122 chr06:001177122 0 W/1177122-1177122 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.687696;DP=4733;DP4=2282,2130,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.27765e-09;MQSB=0.36813;RPB=0.999681;SGB=67.3108;VDB=0.970094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.6:1177129 chr06:001177129 0 W/1177129-1177129 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.0977195;DP=4780;DP4=2294,2168,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000209205;MQB=2.13008e-09;MQSB=0.0879742;RPB=0.999109;SGB=46.7622;VDB=0.89645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.6:1194264 chr06:001194264 0 W/1194264-1194264 FN2487 SNP C -> T AC=1;AN=200;BQB=0.88063;DP=4157;DP4=1936,1906,6,8;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0368054;MQB=0.977728;MQSB=0.0621647;RPB=0.961086;SGB=58.8698;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.6:1204902 chr06:001204902 0 W/1204902-1204902 FN4167-S SNP G -> A AC=1;AN=170;BQB=0.988306;DP=2360;DP4=972,1338,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=13;MQ0F=0.611864;MQB=0.06853;MQSB=0;RPB=0.961833;SGB=61.2001;VDB=0.443024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.6:1211523 chr06:001211523 0 W/1211523-1211523 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1261-S.SNP.6:1211524 chr06:001211524 0 W/1211524-1211524 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1660-S.SNP.6:1216143 chr06:001216143 0 W/1216143-1216143 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN928-S.SNP.6:1228421 chr06:001228421 0 W/1228421-1228421 FN928-S Single Base Substitution T-A INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3628-S.SNP.6:1232535 chr06:001232535 0 W/1232535-1232535 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.996812;DP=2520;DP4=1482,955,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000396825;MQB=8.66544e-06;MQSB=0.835616;RPB=0.53454;SGB=35.4339;VDB=0.26558;EFF=INTRON(MODIFIER||||1809|LOC_Os06g03250|protein_coding|CODING|LOC_Os06g03250.1|1|1) FN3822-S.SNP.6:1239912 chr06:001239912 0 W/1239912-1239912 FN3822-S SNP G -> A AC=2;AN=190;BQB=0.99916;DP=2829;DP4=1499,1217,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16997e-13;MQSB=0.902123;RPB=0.907852;SGB=108.296;VDB=0.792268;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1165|1809|LOC_Os06g03250|protein_coding|CODING|LOC_Os06g03250.1|7|1) FN509-S.SNP.6:1242679 chr06:001242679 0 W/1242679-1242679 FN509-S Single Base Substitution G-A INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN832-S.SNP.6:1257364 chr06:001257364 0 W/1257364-1257364 FN832-S Single Base Substitution C-T INTRON HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN869-S.SNP.6:1257507 chr06:001257507 0 W/1257507-1257507 FN869-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g03300 retrotransposon protein, putative, unclassified SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN505-S.SNP.6:1259282 chr06:001259282 0 W/1259282-1259282 FN505-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1277-S.SNP.6:1259826 chr06:001259826 0 W/1259826-1259826 FN1277-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN4143-S.SNP.6:1263456 chr06:001263456 0 W/1263456-1263456 FN4143-S SNP T -> C AC=1;AN=170;BQB=0.940055;DP=2816;DP4=1263,1130,11,15;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.28308e-07;MQSB=0.546451;RPB=0.765355;SGB=49.1957;VDB=0.123183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.6:1263679 chr06:001263679 0 W/1263679-1263679 FN3843-S SNP T -> A AC=1;AN=190;BQB=0.620993;DP=2621;DP4=1097,1287,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.81494e-06;MQSB=0.702517;RPB=0.819872;SGB=2.55724;VDB=0.778596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.6:1263946 chr06:001263946 0 W/1263946-1263946 FN3910-S SNP C -> A AC=1;AN=158;BQB=0.963367;DP=2883;DP4=988,1769,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00763094;MQB=0.267787;MQSB=0.0422508;RPB=0.530864;SGB=47.0672;VDB=0.948277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.6:1264818 chr06:001264818 0 W/1264818-1264818 FN2361 SNP G -> C AC=1;AN=192;BQB=0.527853;DP=4712;DP4=2277,2144,20,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64236e-19;MQSB=0.823006;RPB=0.890314;SGB=40.2061;VDB=0.248851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.6:1266185 chr06:001266185 0 W/1266185-1266185 FN1046-S Single Base Substitution T-C INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1281-S.SNP.6:1266472 chr06:001266472 0 W/1266472-1266472 FN1281-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g03320 retrotransposon protein, putative, unclassified, expressed SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN-47.SNP.6:1272072 chr06:001272072 0 W/1272072-1272072 FN-47 Single Base Substitution G-A INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN-277.SNP.6:1275066 chr06:001275066 0 W/1275066-1275066 FN-277 Single Base Substitution C-T INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1336-S.SNP.6:1279638 chr06:001279638 0 W/1279638-1279638 FN1336-S Single Base Substitution G-A INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2325.SNP.6:1280477 chr06:001280477 0 W/1280477-1280477 FN2325 SNP A -> C AC=1;AN=192;BQB=0.720542;DP=4725;DP4=2380,2079,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.103069;MQB=0.899136;MQSB=0;RPB=0.860327;SGB=4.22611;VDB=0.264167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.6:1281097 chr06:001281097 0 W/1281097-1281097 FN2456 SNP G -> A AC=1;AN=200;BQB=0.373216;DP=5265;DP4=2202,2693,7,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00474834;MQB=8.31012e-07;MQSB=0.031595;RPB=0.015082;SGB=-55.5209;VDB=0.0438392;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.6:1284032 chr06:001284032 0 W/1284032-1284032 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.993734;DP=2932;DP4=1394,1395,6,20;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0245566;MQB=3.95193e-07;MQSB=0.283423;RPB=0.216124;SGB=-192.636;VDB=0.883085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.6:1285195 chr06:001285195 0 W/1285195-1285195 FN2631-S SNP A -> T AC=2;AN=200;BQB=0.738999;DP=4218;DP4=1727,2067,17,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.09481e-24;MQSB=0.69227;RPB=0.990734;SGB=220.051;VDB=0.0893843;EFF=INTRON(MODIFIER||||161|LOC_Os06g03370|protein_coding|CODING|LOC_Os06g03370.1|2|1) FN_N1-151-7.SNP.6:1285195 chr06:001285195 0 W/1285195-1285195 FN_N1-151-7 Single Base Substitution A-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2724-S.SNP.6:1290743 chr06:001290743 0 W/1290743-1290743 FN2724-S SNP G -> C AC=1;AN=200;BQB=0.961493;DP=4799;DP4=2357,2165,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.8691e-12;MQSB=0.972289;RPB=0.780793;SGB=91.1059;VDB=0.533336;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E546D|789|LOC_Os06g03380|protein_coding|CODING|LOC_Os06g03380.1|1|1) FN1180-S.SNP.6:1293402 chr06:001293402 0 W/1293402-1293402 FN1180-S Single Base Substitution A-G INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN-363.SNP.6:1296551 chr06:001296551 0 W/1296551-1296551 FN-363 Single Base Substitution G-A INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2326.SNP.6:1319824 chr06:001319824 0 W/1319824-1319824 FN2326 SNP G -> T AC=1;AN=192;BQB=0.917591;DP=4401;DP4=1939,2163,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00954329;MQB=0.00390763;MQSB=0.000557031;RPB=0.999253;SGB=46.9087;VDB=0.0309983;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.6:1321357 chr06:001321357 0 W/1321357-1321357 FN1227-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g03450 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2611-S.SNP.6:1324593 chr06:001324593 0 W/1324593-1324593 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.816448;DP=4578;DP4=1926,2343,7,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000873744;MQB=6.25917e-09;MQSB=0.655428;RPB=0.984231;SGB=81.8956;VDB=0.0854589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.6:1329136 chr06:001329136 0 W/1329136-1329136 FN3443-S SNP C -> G AC=1;AN=184;BQB=0.982382;DP=3793;DP4=1479,2232,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.52676;MQB=0.0107241;MQSB=0;RPB=0.49259;SGB=44.2207;VDB=0.547427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q794H|1310|LOC_Os06g03474|protein_coding|CODING|LOC_Os06g03474.1|5|1) FN3537-S.SNP.6:1334943 chr06:001334943 0 W/1334943-1334943 FN3537-S SNP A -> T AC=1;AN=188;BQB=0.160841;DP=3004;DP4=997,1634,6,16;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.404461;MQB=0.559738;MQSB=0;RPB=0.0183723;SGB=-38.278;VDB=0.159471;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.6:1335949 chr06:001335949 0 W/1335949-1335949 FN969-S Single Base Substitution A-T INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2618-S.SNP.6:1337720 chr06:001337720 0 W/1337720-1337720 FN2618-S SNP G -> A AC=1;AN=188;BQB=0.972052;DP=3850;DP4=1733,1875,16,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.15743e-16;MQSB=0.899435;RPB=0.916723;SGB=90.4807;VDB=0.157264;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-1.SNP.6:1337765 chr06:001337765 0 W/1337765-1337765 FN_398-1 Single Base Substitution A-G INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN-384.SNP.6:1340269 chr06:001340269 0 W/1340269-1340269 FN-384 Single Base Substitution A-T INTERGENIC HOMO SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN_812-4-1.SNP.6:1350322 chr06:001350322 0 W/1350322-1350322 FN_812-4-1 Single Base Substitution G-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN-300.SNP.6:1359840 chr06:001359840 0 W/1359840-1359840 FN-300 Single Base Substitution T-C INTERGENIC HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN4135-S.SNP.6:1361239 chr06:001361239 0 W/1361239-1361239 FN4135-S SNP C -> A AC=1;AN=182;BQB=0.866833;DP=2862;DP4=1062,1680,5,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.04648e-09;MQSB=7.14136e-06;RPB=0.302596;SGB=89.2199;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.6:1369569 chr06:001369569 0 W/1369569-1369569 FN2334 SNP T -> C AC=1;AN=192;BQB=0.942801;DP=5146;DP4=2549,2331,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.99504e-14;MQSB=0.972656;RPB=0.987609;SGB=44.3;VDB=0.193955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.6:1370049 chr06:001370049 0 W/1370049-1370049 FN2645-S SNP C -> A AC=1;AN=200;BQB=0.805733;DP=5147;DP4=2437,2422,23,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.51828e-16;MQSB=0.831588;RPB=0.9601;SGB=65.9573;VDB=0.938868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.6:1374160 chr06:001374160 0 W/1374160-1374160 FN3912-S SNP C -> T AC=2;AN=158;BQB=0.0849888;DP=2550;DP4=1176,1122,12,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.91191e-08;MQSB=0.929488;RPB=0.948047;SGB=-15.4297;VDB=0.775187;EFF=INTRON(MODIFIER||||766|LOC_Os06g03560|protein_coding|CODING|LOC_Os06g03560.1|3|1) FN1551-S.SNP.6:1383553 chr06:001383553 0 W/1383553-1383553 FN1551-S Single Base Substitution G-C INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2252-S.SNP.6:1387574 chr06:001387574 0 W/1387574-1387574 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.66635;DP=4944;DP4=2363,2293,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.14002e-08;MQSB=0.772151;RPB=0.519017;SGB=4.11112;VDB=0.141232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.6:1398816 chr06:001398816 0 W/1398816-1398816 FN1049-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g03610 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1049-S.SNP.6:1398817 chr06:001398817 0 W/1398817-1398817 FN1049-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g03610 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3353-S.SNP.6:1401414 chr06:001401414 0 W/1401414-1401414 FN3353-S SNP C -> T AC=2;AN=184;BQB=0.257041;DP=3234;DP4=1315,1693,12,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.38725e-11;MQSB=0.992369;RPB=0.628962;SGB=99.14;VDB=0.962134;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.6:1416759 chr06:001416759 0 W/1416759-1416759 FN4134-S SNP T -> A AC=1;AN=182;BQB=0.99192;DP=2992;DP4=1530,1383,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.1767e-08;MQSB=0.994926;RPB=0.584767;SGB=62.1548;VDB=0.0582995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.6:1421625 chr06:001421625 0 W/1421625-1421625 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.992073;DP=3660;DP4=2054,1504,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98706e-08;MQSB=0.806063;RPB=0.526793;SGB=42.7914;VDB=0.0239849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R65Q|80|LOC_Os06g03650|protein_coding|CODING|LOC_Os06g03650.1|1|1) FN230-S.SNP.6:1424003 chr06:001424003 0 W/1424003-1424003 FN230-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN4176-S.SNP.6:1424264 chr06:001424264 0 W/1424264-1424264 FN4176-S SNP G -> A AC=1;AN=170;BQB=0.98895;DP=2827;DP4=1375,1359,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.06043e-09;MQSB=0.87991;RPB=0.0794534;SGB=61.2001;VDB=0.127291;EFF=INTRON(MODIFIER||||425|LOC_Os06g03660|protein_coding|CODING|LOC_Os06g03660.1|2|1) FN1031-S.SNP.6:1428342 chr06:001428342 0 W/1428342-1428342 FN1031-S Single Base Substitution T-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1084-S.SNP.6:1441093 chr06:001441093 0 W/1441093-1441093 FN1084-S Single Base Substitution T-C INTRON HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2464.SNP.6:1451656 chr06:001451656 0 W/1451656-1451656 FN2464 SNP G -> A AC=1;AN=200;BQB=0.887844;DP=4805;DP4=2238,2165,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.89501e-08;MQSB=0.480125;RPB=0.929376;SGB=63.4749;VDB=0.801087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.6:1451657 chr06:001451657 0 W/1451657-1451657 FN2464 SNP G -> A AC=1;AN=200;BQB=0.28735;DP=4789;DP4=2253,2144,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.50783e-06;MQSB=0.571765;RPB=0.751393;SGB=7.88476;VDB=0.798884;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.6:1453600 chr06:001453600 0 W/1453600-1453600 FN722-S Single Base Substitution C-A INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN443-S.SNP.6:1474056 chr06:001474056 0 W/1474056-1474056 FN443-S Single Base Substitution C-T INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2124-S.SNP.6:1475549 chr06:001475549 0 W/1475549-1475549 FN2124-S SNP A -> T AC=1;AN=168;BQB=0.983972;DP=4208;DP4=2139,2028,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05745e-10;MQSB=0.972995;RPB=0.880861;SGB=58.7637;VDB=0.276171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.6:1476121 chr06:001476121 0 W/1476121-1476121 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.316105;DP=3419;DP4=1370,2013,4,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.64886e-08;MQSB=0.96739;RPB=0.935267;SGB=-40.0741;VDB=0.497426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.6:1481258 chr06:001481258 0 W/1481258-1481258 FN2562-S SNP A -> G AC=2;AN=198;BQB=0.879629;DP=4092;DP4=1864,2002,22,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.14824e-28;MQSB=0.894197;RPB=0.793726;SGB=242.544;VDB=0.392758;EFF=INTRON(MODIFIER||||618|LOC_Os06g03750|protein_coding|CODING|LOC_Os06g03750.1|1|1) FN863-S.SNP.6:1481438 chr06:001481438 0 W/1481438-1481438 FN863-S Single Base Substitution C-T INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN4151-S.SNP.6:1487724 chr06:001487724 0 W/1487724-1487724 FN4151-S SNP A -> G AC=2;AN=170;BQB=0.986519;DP=2407;DP4=1166,1151,17,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.42008e-21;MQSB=0.998762;RPB=0.928903;SGB=150.053;VDB=0.615098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L340S|540|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L340S|510|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L270S|440|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.3|7|1),SPLICE_SITE_REGION(LOW||||540|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.1|9|1),SPLICE_SITE_REGION(LOW||||510|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.2|9|1),SPLICE_SITE_REGION(LOW||||440|LOC_Os06g03760|protein_coding|CODING|LOC_Os06g03760.3|7|1) FN3665-S.SNP.6:1490666 chr06:001490666 0 W/1490666-1490666 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.98955;DP=2148;DP4=1196,813,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.0261e-12;MQSB=0.195571;RPB=0.625162;SGB=51.7524;VDB=0.781074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.6:1496309 chr06:001496309 0 W/1496309-1496309 FN2686-S SNP T -> C AC=1;AN=200;BQB=0.978383;DP=4989;DP4=2417,2394,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32662e-05;MQSB=0.95068;RPB=0.878477;SGB=31.2392;VDB=0.0456635;EFF=INTRON(MODIFIER||||733|LOC_Os06g03770|protein_coding|CODING|LOC_Os06g03770.1|12|1) FN3797-S.SNP.6:1496513 chr06:001496513 0 W/1496513-1496513 FN3797-S SNP A -> C AC=1;AN=190;BQB=0.94958;DP=2807;DP4=1254,1462,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07825e-06;MQSB=0.994018;RPB=0.392791;SGB=21.8853;VDB=0.513454;EFF=INTRON(MODIFIER||||733|LOC_Os06g03770|protein_coding|CODING|LOC_Os06g03770.1|11|1) FN1268-S.SNP.6:1498201 chr06:001498201 0 W/1498201-1498201 FN1268-S Single Base Substitution C-A INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1268-S.SNP.6:1498202 chr06:001498202 0 W/1498202-1498202 FN1268-S Single Base Substitution A-T INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3743-S.SNP.6:1499479 chr06:001499479 0 W/1499479-1499479 FN3743-S SNP C -> T AC=1;AN=190;BQB=0.310253;DP=1866;DP4=1230,554,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00214362;MQB=0.0366806;MQSB=0.0190214;RPB=0.28807;SGB=36.1006;VDB=0.361517;EFF=INTRON(MODIFIER||||733|LOC_Os06g03770|protein_coding|CODING|LOC_Os06g03770.1|4|1) FN1697-S.SNP.6:1506600 chr06:001506600 0 W/1506600-1506600 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.823974;DP=3476;DP4=1805,1640,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.34561e-11;MQSB=0.743163;RPB=0.899889;SGB=36.2493;VDB=0.680751;EFF=INTRON(MODIFIER||||723|LOC_Os06g03780|protein_coding|CODING|LOC_Os06g03780.1|4|1) FN1697-S.SNP.6:1506601 chr06:001506601 0 W/1506601-1506601 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.80842;DP=3467;DP4=1798,1630,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.93277e-12;MQSB=0.792483;RPB=0.737919;SGB=-66.2726;VDB=0.527188;EFF=INTRON(MODIFIER||||723|LOC_Os06g03780|protein_coding|CODING|LOC_Os06g03780.1|4|1) FN928-S.SNP.6:1531158 chr06:001531158 0 W/1531158-1531158 FN928-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g03820 expressed protein SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN928-S.SNP.6:1531159 chr06:001531159 0 W/1531159-1531159 FN928-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g03820 expressed protein SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN832-S.SNP.6:1534059 chr06:001534059 0 W/1534059-1534059 FN832-S Single Base Substitution G-A INTERGENIC HOMO SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN1644-S.SNP.6:1534588 chr06:001534588 0 W/1534588-1534588 FN1644-S Single Base Substitution T-A INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1565-S.SNP.6:1539342 chr06:001539342 0 W/1539342-1539342 FN1565-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os06g03830 retinol dehydrogenase, putative, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2489.SNP.6:1546458 chr06:001546458 0 W/1546458-1546458 FN2489 SNP G -> A AC=1;AN=200;BQB=0.822709;DP=4583;DP4=2597,1674,20,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04158e-14;MQSB=0.475365;RPB=0.575501;SGB=22.3313;VDB=0.709146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.6:1552401 chr06:001552401 0 W/1552401-1552401 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.74646;DP=4249;DP4=1985,2036,15,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23453e-21;MQSB=0.539082;RPB=0.312129;SGB=83.8419;VDB=0.380249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.6:1566110 chr06:001566110 0 W/1566110-1566110 FN2092-S SNP T -> C AC=1;AN=168;BQB=0.148598;DP=2424;DP4=1383,975,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53278e-08;MQSB=0.990023;RPB=0.656869;SGB=-12.3568;VDB=0.920336;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F144S|181|LOC_Os06g03890|protein_coding|CODING|LOC_Os06g03890.1|2|1) FN1570-S.SNP.6:1583413 chr06:001583413 0 W/1583413-1583413 FN1570-S Single Base Substitution C-T INTRON HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN987-S.SNP.6:1588033 chr06:001588033 0 W/1588033-1588033 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN496-S.SNP.6:1591033 chr06:001591033 0 W/1591033-1591033 FN496-S Single Base Substitution C-T INTRON HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3454-S.SNP.6:1594710 chr06:001594710 0 W/1594710-1594710 FN3454-S SNP C -> G AC=1;AN=184;BQB=0.993944;DP=2229;DP4=1068,1103,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.71935e-08;MQSB=0.996747;RPB=0.975749;SGB=32.2261;VDB=0.906888;EFF=INTRON(MODIFIER||||487|LOC_Os06g03940|protein_coding|CODING|LOC_Os06g03940.1|9|1) FN2497.SNP.6:1597726 chr06:001597726 0 W/1597726-1597726 FN2497 SNP A -> G AC=1;AN=200;BQB=0.504124;DP=4598;DP4=2440,1909,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.24053e-07;MQSB=0.995591;RPB=0.963203;SGB=25.849;VDB=0.498274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.6:1600646 chr06:001600646 0 W/1600646-1600646 FN3854-S SNP A -> T AC=2;AN=158;BQB=0.991043;DP=2277;DP4=1025,1103,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.44546e-15;MQSB=0.954399;RPB=0.617677;SGB=116.978;VDB=0.835077;EFF=INTRON(MODIFIER||||57|LOC_Os06g03960|protein_coding|CODING|LOC_Os06g03960.1|1|1) FN4201-S.SNP.6:1601473 chr06:001601473 0 W/1601473-1601473 FN4201-S SNP C -> T AC=1;AN=170;BQB=0.992978;DP=2655;DP4=1415,1177,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.38654e-05;MQSB=0.987701;RPB=0.55452;SGB=38.987;VDB=0.201801;EFF=INTRON(MODIFIER||||57|LOC_Os06g03960|protein_coding|CODING|LOC_Os06g03960.1|1|1) FN425-S.SNP.6:1616217 chr06:001616217 0 W/1616217-1616217 FN425-S Single Base Substitution G-C INTRON HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN-200.SNP.6:1623146 chr06:001623146 0 W/1623146-1623146 FN-200 Single Base Substitution C-T INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3479-S.SNP.6:1623854 chr06:001623854 0 W/1623854-1623854 FN3479-S SNP T -> C AC=1;AN=184;BQB=0.864093;DP=3640;DP4=1789,1734,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000274725;MQB=5.50243e-15;MQSB=0.920928;RPB=0.167928;SGB=-39.5778;VDB=0.366528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.6:1631899 chr06:001631899 0 W/1631899-1631899 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.382868;DP=5027;DP4=2446,2371,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198926;MQB=5.37947e-06;MQSB=0.657989;RPB=0.874752;SGB=53.6492;VDB=0.705787;EFF=INTRON(MODIFIER||||542|LOC_Os06g03990|protein_coding|CODING|LOC_Os06g03990.1|2|1) FN968-S.SNP.6:1636038 chr06:001636038 0 W/1636038-1636038 FN968-S Single Base Substitution G-A INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN968-S.SNP.6:1636039 chr06:001636039 0 W/1636039-1636039 FN968-S Single Base Substitution G-A INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3917-S.SNP.6:1650495 chr06:001650495 0 W/1650495-1650495 FN3917-S SNP G -> C AC=1;AN=158;BQB=0.978168;DP=2394;DP4=1215,1097,4,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.75914e-08;MQSB=0.996681;RPB=0.860925;SGB=40.8124;VDB=0.39638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G145A|392|LOC_Os06g04040|protein_coding|CODING|LOC_Os06g04040.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G145A|303|LOC_Os06g04040|protein_coding|CODING|LOC_Os06g04040.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G145A|217|LOC_Os06g04040|protein_coding|CODING|LOC_Os06g04040.3|5|1) FN-234.SNP.6:1650930 chr06:001650930 0 W/1650930-1650930 FN-234 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-200.SNP.6:1650948 chr06:001650948 0 W/1650948-1650948 FN-200 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3854-S.SNP.6:1663632 chr06:001663632 0 W/1663632-1663632 FN3854-S SNP T -> A AC=2;AN=158;BQB=0.99908;DP=2580;DP4=1024,1418,6,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.96859e-13;MQSB=0.969092;RPB=0.466063;SGB=74.5068;VDB=0.964281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.6:1665142 chr06:001665142 0 W/1665142-1665142 FN2788-S SNP C -> G AC=1;AN=198;BQB=0.730816;DP=4521;DP4=1932,2351,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.32032e-14;MQSB=0.992544;RPB=0.816787;SGB=113.881;VDB=0.678866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.6:1665832 chr06:001665832 0 W/1665832-1665832 FN3391-S SNP C -> G AC=1;AN=184;BQB=0.825443;DP=2668;DP4=1166,1262,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000329986;MQSB=0.931775;RPB=0.938198;SGB=10.6662;VDB=0.446641;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.6:1671586 chr06:001671586 0 W/1671586-1671586 FN2083-S SNP C -> G AC=1;AN=168;BQB=0.55475;DP=3838;DP4=2116,1634,36,28;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.3452e-35;MQSB=0.999504;RPB=0.759542;SGB=-1706.18;VDB=0.522421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.6:1671610 chr06:001671610 0 W/1671610-1671610 FN2083-S SNP A -> T AC=1;AN=168;BQB=0.972093;DP=3896;DP4=2206,1624,24,28;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.77373e-26;MQSB=0.869513;RPB=0.139203;SGB=-1242.07;VDB=1.04262e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.6:1678466 chr06:001678466 0 W/1678466-1678466 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.735922;DP=3641;DP4=1683,1805,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40949e-07;MQSB=0.862199;RPB=0.920291;SGB=71.3514;VDB=0.728711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.6:1681340 chr06:001681340 0 W/1681340-1681340 FN1076-S Single Base Substitution C-T INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2540-S.SNP.6:1684486 chr06:001684486 0 W/1684486-1684486 FN2540-S SNP C -> A AC=2;AN=198;BQB=0.969516;DP=4015;DP4=2441,1302,23,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.28102e-18;MQSB=0.997275;RPB=0.508316;SGB=108.456;VDB=0.367063;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-1.SNP.6:1684833 chr06:001684833 0 W/1684833-1684833 FN_N1-151-1 Single Base Substitution G-T INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN2711-S.SNP.6:1696576 chr06:001696576 0 W/1696576-1696576 FN2711-S SNP T -> A AC=2;AN=200;BQB=0.97223;DP=4908;DP4=2367,2316,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.8716e-23;MQSB=0.958572;RPB=0.995531;SGB=41.5933;VDB=0.884231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.6:1697694 chr06:001697694 0 W/1697694-1697694 FN3743-S SNP T -> A AC=1;AN=190;BQB=0.911821;DP=1542;DP4=148,1324,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09077e-05;MQSB=0.840464;RPB=0.836653;SGB=30.8803;VDB=0.316575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.6:1697695 chr06:001697695 0 W/1697695-1697695 FN3743-S SNP T -> A AC=1;AN=190;BQB=0.89197;DP=1546;DP4=147,1352,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04657e-05;MQSB=0.808075;RPB=0.782846;SGB=30.8803;VDB=0.308129;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.6:1698863 chr06:001698863 0 W/1698863-1698863 FN1514-S Single Base Substitution A-C INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1217-S.SNP.6:1706646 chr06:001706646 0 W/1706646-1706646 FN1217-S Single Base Substitution G-A INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3729-S.SNP.6:1709636 chr06:001709636 0 W/1709636-1709636 FN3729-S SNP T -> C AC=1;AN=190;BQB=0.74969;DP=1338;DP4=730,520,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000383355;MQSB=0.426838;RPB=0.744178;SGB=-5.21201;VDB=0.613304;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.6:1714082 chr06:001714082 0 W/1714082-1714082 FN505-S Single Base Substitution A-G INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN782-S.SNP.6:1714430 chr06:001714430 0 W/1714430-1714430 FN782-S Single Base Substitution T-A INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN1251-S.SNP.6:1718099 chr06:001718099 0 W/1718099-1718099 FN1251-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN2302.SNP.6:1720009 chr06:001720009 0 W/1720009-1720009 FN2302 SNP A -> T AC=1;AN=192;BQB=0.998082;DP=5212;DP4=2439,2482,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.38096e-12;MQSB=0.572744;RPB=0.977196;SGB=61.1661;VDB=0.829463;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.6:1720016 chr06:001720016 0 W/1720016-1720016 FN810-S Single Base Substitution A-C INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN550-S.SNP.6:1720691 chr06:001720691 0 W/1720691-1720691 FN550-S Single Base Substitution A-T INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1681-S.SNP.6:1721917 chr06:001721917 0 W/1721917-1721917 FN1681-S SNP T -> C AC=2;AN=188;BQB=0.0706315;DP=3739;DP4=1385,2295,13,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.1674e-16;MQSB=0.999292;RPB=0.648587;SGB=-88.1232;VDB=0.345707;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.6:1722310 chr06:001722310 0 W/1722310-1722310 FN828-S Single Base Substitution G-A INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN828-S.SNP.6:1722311 chr06:001722311 0 W/1722311-1722311 FN828-S Single Base Substitution C-A INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3493-S.SNP.6:1733998 chr06:001733998 0 W/1733998-1733998 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.980658;DP=3799;DP4=2094,1529,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.67517e-11;MQSB=0.820158;RPB=0.784797;SGB=56.8786;VDB=0.653918;EFF=UTR_3_PRIME(MODIFIER||129||326|LOC_Os06g04150|protein_coding|CODING|LOC_Os06g04150.1|1|1) FN4032-S.SNP.6:1736376 chr06:001736376 0 W/1736376-1736376 FN4032-S SNP C -> T AC=1;AN=168;BQB=0.952287;DP=2263;DP4=1219,953,14,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57407e-12;MQSB=0.747397;RPB=0.942481;SGB=87.6193;VDB=0.0552785;EFF=UTR_3_PRIME(MODIFIER||73||389|LOC_Os06g04169|protein_coding|CODING|LOC_Os06g04169.2|4|1) FN4032-S.SNP.6:1740689 chr06:001740689 0 W/1740689-1740689 FN4032-S SNP C -> T AC=1;AN=168;BQB=0.324973;DP=2661;DP4=1229,1276,19,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.45248e-14;MQSB=0.938796;RPB=0.95774;SGB=28.5146;VDB=0.415856;EFF=INTRON(MODIFIER||||389|LOC_Os06g04169|protein_coding|CODING|LOC_Os06g04169.2|3|1),INTRON(MODIFIER||||500|LOC_Os06g04169|protein_coding|CODING|LOC_Os06g04169.1|3|1) FN4224-S.SNP.6:1746450 chr06:001746450 0 W/1746450-1746450 FN4224-S SNP G -> A AC=2;AN=170;BQB=0.999971;DP=2292;DP4=946,1261,15,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.65278e-17;MQSB=0.120052;RPB=0.962687;SGB=154.496;VDB=0.933123;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.6:1757929 chr06:001757929 0 W/1757929-1757929 FN704-S Single Base Substitution A-T INTRON HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN3526-S.SNP.6:1763264 chr06:001763264 0 W/1763264-1763264 FN3526-S SNP C -> G AC=1;AN=188;BQB=0.983279;DP=5517;DP4=3783,1538,16,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.47875e-09;MQSB=8.792e-05;RPB=0.95009;SGB=85.3253;VDB=0.824688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.6:1764994 chr06:001764994 0 W/1764994-1764994 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.557139;DP=1769;DP4=730,986,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.37062e-06;MQSB=0.785762;RPB=0.980806;SGB=20.9896;VDB=0.703613;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.6:1766278 chr06:001766278 0 W/1766278-1766278 FN517-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN-222.SNP.6:1771530 chr06:001771530 0 W/1771530-1771530 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1018-S.SNP.6:1776344 chr06:001776344 0 W/1776344-1776344 FN1018-S Single Base Substitution T-A INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2365.SNP.6:1781356 chr06:001781356 0 W/1781356-1781356 FN2365 SNP A -> G AC=1;AN=192;BQB=0.806232;DP=4979;DP4=2318,2299,17,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.1779e-17;MQSB=0.909161;RPB=0.944856;SGB=-43.1695;VDB=0.966981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.6:1786888 chr06:001786888 0 W/1786888-1786888 FN1045-S Single Base Substitution C-G INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1025-S.SNP.6:1794283 chr06:001794283 0 W/1794283-1794283 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-262.SNP.6:1799080 chr06:001799080 0 W/1799080-1799080 FN-262 Single Base Substitution C-G INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-166.SNP.6:1804152 chr06:001804152 0 W/1804152-1804152 FN-166 Single Base Substitution A-T INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-301.SNP.6:1808785 chr06:001808785 0 W/1808785-1808785 FN-301 Single Base Substitution A-C UTR_3_PRIME HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-106.SNP.6:1814137 chr06:001814137 0 W/1814137-1814137 FN-106 Single Base Substitution T-A INTERGENIC HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2452.SNP.6:1814137 chr06:001814137 0 W/1814137-1814137 FN2452 SNP T -> A AC=1;AN=200;BQB=0.517081;DP=4259;DP4=1952,1827,14,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.88808e-13;MQSB=0.392278;RPB=0.861559;SGB=-100.069;VDB=0.364355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.6:1814137 chr06:001814137 0 W/1814137-1814137 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.680427;DP=4599;DP4=2273,1916,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.59201e-15;MQSB=0.96008;RPB=0.951214;SGB=-107.254;VDB=0.309051;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.6:1814137 chr06:001814137 0 W/1814137-1814137 FN3940-S SNP T -> A AC=1;AN=158;BQB=0.868602;DP=2185;DP4=1045,954,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000101276;MQSB=0.939907;RPB=0.642022;SGB=47.0672;VDB=0.0607873;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.6:1814137 chr06:001814137 0 W/1814137-1814137 FN4063-S SNP T -> A AC=1;AN=168;BQB=0.520017;DP=2321;DP4=1183,966,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=7.74169e-06;MQSB=0.908;RPB=0.511962;SGB=27.8864;VDB=0.119856;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.6:1814138 chr06:001814138 0 W/1814138-1814138 FN1399-S Single Base Substitution A-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. W470-2-1.SNP.6:1815869 chr06:001815869 0 W/1815869-1815869 W470-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2638-S.SNP.6:1830513 chr06:001830513 0 W/1830513-1830513 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.601902;DP=5057;DP4=2419,2421,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09694e-09;MQSB=0.924644;RPB=0.99995;SGB=51.0851;VDB=0.877924;EFF=INTRON(MODIFIER||||240|LOC_Os06g04310|protein_coding|CODING|LOC_Os06g04310.1|3|1) FN3650-S.SNP.6:1835804 chr06:001835804 0 W/1835804-1835804 FN3650-S SNP G -> C AC=1;AN=190;BQB=0.998088;DP=2626;DP4=1412,1096,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.57864e-15;MQSB=0.998734;RPB=0.0845035;SGB=103.742;VDB=0.913011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.6:1840253 chr06:001840253 0 W/1840253-1840253 FN3681-S SNP A -> G AC=1;AN=190;BQB=0.955388;DP=2801;DP4=1374,1306,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.15956e-13;MQSB=0.980128;RPB=0.816858;SGB=41.5369;VDB=0.422935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V215A|416|LOC_Os06g04330|protein_coding|CODING|LOC_Os06g04330.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V215A|404|LOC_Os06g04330|protein_coding|CODING|LOC_Os06g04330.2|3|1) FN-402.SNP.6:1843670 chr06:001843670 0 W/1843670-1843670 FN-402 Single Base Substitution T-C INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3371-S.SNP.6:1854647 chr06:001854647 0 W/1854647-1854647 FN3371-S SNP A -> G AC=1;AN=184;BQB=0.87818;DP=3302;DP4=1503,1659,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.10703e-11;MQSB=0.983739;RPB=0.998427;SGB=63.9222;VDB=0.0451129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.6:1863588 chr06:001863588 0 W/1863588-1863588 FN3110-S SNP G -> A AC=2;AN=184;BQB=0.500961;DP=2751;DP4=1373,1270,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.53347e-11;MQSB=0.994738;RPB=0.597468;SGB=85.0529;VDB=0.13986;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.6:1867890 chr06:001867890 0 W/1867890-1867890 FN782-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN782-S.SNP.6:1867902 chr06:001867902 0 W/1867902-1867902 FN782-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN2724-S.SNP.6:1872307 chr06:001872307 0 W/1872307-1872307 FN2724-S SNP C -> A AC=1;AN=200;BQB=0.868764;DP=5124;DP4=2585,2205,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4192e-14;MQSB=0.917744;RPB=0.650675;SGB=22.3313;VDB=0.62853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.6:1872308 chr06:001872308 0 W/1872308-1872308 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.813928;DP=5136;DP4=2561,2221,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.52357e-16;MQSB=0.910357;RPB=0.643673;SGB=-7.05853;VDB=0.501174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.6:1898196 chr06:001898196 0 W/1898196-1898196 FN3846-S SNP G -> T AC=1;AN=190;BQB=0.994302;DP=2462;DP4=1114,1214,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.02922e-05;MQSB=0.420444;RPB=0.99996;SGB=21.8853;VDB=0.877587;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.6:1899335 chr06:001899335 0 W/1899335-1899335 FN-257 Single Base Substitution G-A INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN1406-S.SNP.6:1899399 chr06:001899399 0 W/1899399-1899399 FN1406-S Single Base Substitution G-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2318.SNP.6:1905023 chr06:001905023 0 W/1905023-1905023 FN2318 SNP A -> T AC=1;AN=192;BQB=0.7597;DP=5306;DP4=2401,2625,19,15;HOB=5.42535e-05;ICB=0.000109072;MQ=23;MQ0F=0.379759;MQB=0.0710954;MQSB=0;RPB=0.0185625;SGB=33.9487;VDB=0.251785;EFF=INTRON(MODIFIER||||659|LOC_Os06g04450|protein_coding|CODING|LOC_Os06g04450.1|12|1),INTRON(MODIFIER||||659|LOC_Os06g04450|protein_coding|CODING|LOC_Os06g04450.2|12|1) FN-169.SNP.6:1906219 chr06:001906219 0 W/1906219-1906219 FN-169 Single Base Substitution A-G INTRON HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN685-S.SNP.6:1915225 chr06:001915225 0 W/1915225-1915225 FN685-S Single Base Substitution G-A INTRON HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN685-S.SNP.6:1915226 chr06:001915226 0 W/1915226-1915226 FN685-S Single Base Substitution C-A INTRON HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN996-S.SNP.6:1917534 chr06:001917534 0 W/1917534-1917534 FN996-S Single Base Substitution C-A INTRON HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1056-S.SNP.6:1924125 chr06:001924125 0 W/1924125-1924125 FN1056-S Single Base Substitution G-A INTERGENIC HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3518-S.SNP.6:1926517 chr06:001926517 0 W/1926517-1926517 FN3518-S SNP T -> A AC=2;AN=188;BQB=0.965655;DP=2778;DP4=1384,1307,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.36515e-13;MQSB=0.990905;RPB=0.890073;SGB=64.3306;VDB=0.394621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.6:1944382 chr06:001944382 0 W/1944382-1944382 FN2360 SNP C -> G AC=2;AN=192;BQB=0.504296;DP=5298;DP4=2394,2585,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.41645e-26;MQSB=0.994012;RPB=0.393864;SGB=54.2852;VDB=0.28567;EFF=INTRON(MODIFIER||||809|LOC_Os06g04520|protein_coding|CODING|LOC_Os06g04520.1|16|1),INTRON(MODIFIER||||664|LOC_Os06g04520|protein_coding|CODING|LOC_Os06g04520.2|16|1) FN1156-S.SNP.6:1960300 chr06:001960300 0 W/1960300-1960300 FN1156-S Single Base Substitution T-C INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3579-S.SNP.6:1962202 chr06:001962202 0 W/1962202-1962202 FN3579-S SNP T -> G AC=1;AN=188;BQB=0.650389;DP=2903;DP4=1317,1440,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.39307e-11;MQSB=0.0343916;RPB=0.630508;SGB=33.7061;VDB=0.504165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.6:1966137 chr06:001966137 0 W/1966137-1966137 FN2600-S SNP A -> C AC=1;AN=198;BQB=0.534662;DP=4197;DP4=1964,2060,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.75586e-11;MQSB=0.648634;RPB=0.9857;SGB=61.7198;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.6:1968827 chr06:001968827 0 W/1968827-1968827 FN416-S Single Base Substitution A-G INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1380-S.SNP.6:1975847 chr06:001975847 0 W/1975847-1975847 FN1380-S Single Base Substitution C-T INTRON HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3767-S.SNP.6:1986473 chr06:001986473 0 W/1986473-1986473 FN3767-S SNP G -> T AC=2;AN=190;BQB=0.377204;DP=2846;DP4=1417,1312,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.71663e-12;MQSB=0.941224;RPB=0.991722;SGB=82.301;VDB=0.864153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.6:1987874 chr06:001987874 0 W/1987874-1987874 FN1430-S Single Base Substitution G-A INTRON HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN480-S.SNP.6:1993722 chr06:001993722 0 W/1993722-1993722 FN480-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1097-S.SNP.6:2004412 chr06:002004412 0 W/2004412-2004412 FN1097-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g04600 Brix domain containing protein, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN4249-S.SNP.6:2019670 chr06:002019670 0 W/2019670-2019670 FN4249-S SNP G -> A AC=1;AN=170;BQB=0.946332;DP=2723;DP4=1402,1249,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.47099e-05;MQSB=0.866799;RPB=0.999871;SGB=7.67082;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.6:2030070 chr06:002030070 0 W/2030070-2030070 FN2446 SNP C -> G AC=1;AN=200;BQB=0.485312;DP=3412;DP4=1126,2073,2,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000293083;MQB=5.86094e-06;MQSB=3.94508e-26;RPB=0.591301;SGB=49.6594;VDB=0.820586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G43A|254|LOC_Os06g04650|protein_coding|CODING|LOC_Os06g04650.1|1|1) FN589-S.SNP.6:2033709 chr06:002033709 0 W/2033709-2033709 FN589-S Single Base Substitution G-T INTRON HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2309.SNP.6:2038291 chr06:002038291 0 W/2038291-2038291 FN2309 SNP A -> T AC=2;AN=192;BQB=0.337178;DP=5165;DP4=2746,2070,3,9;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.64275e-06;MQSB=0.659982;RPB=0.0045485;SGB=16.0922;VDB=0.0530937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.6:2039383 chr06:002039383 0 W/2039383-2039383 FN1394-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2774-S.SNP.6:2047106 chr06:002047106 0 W/2047106-2047106 FN2774-S SNP T -> A AC=1;AN=198;BQB=0.792527;DP=4531;DP4=2166,2184,13,27;HOB=5.10152e-05;ICB=0.000102546;MQ=10;MQ0F=0.6919;MQB=0.0729595;MQSB=0;RPB=0.925904;SGB=133.622;VDB=0.402813;EFF=INTRON(MODIFIER||||519|LOC_Os06g04690|protein_coding|CODING|LOC_Os06g04690.1|1|1) FN2423.SNP.6:2070914 chr06:002070914 0 W/2070914-2070914 FN2423 SNP A -> C AC=1;AN=200;BQB=0.909447;DP=5046;DP4=2298,2406,15,11;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.2174;MQB=0.490857;MQSB=0;RPB=0.517748;SGB=52.9314;VDB=0.940985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.6:2075127 chr06:002075127 0 W/2075127-2075127 FN2316 SNP T -> A AC=1;AN=192;BQB=0.253498;DP=4374;DP4=1967,1887,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.49501e-09;MQSB=0.542482;RPB=0.997788;SGB=-14.2043;VDB=0.489996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.6:2086936 chr06:002086936 0 W/2086936-2086936 FN3924-S SNP A -> G AC=1;AN=158;BQB=0.994336;DP=2491;DP4=1110,1276,10,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.63146e-11;MQSB=0.890669;RPB=0.555397;SGB=64.3985;VDB=0.723687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D293G|311|LOC_Os06g04780|protein_coding|CODING|LOC_Os06g04780.1|2|1) FN-361.SNP.6:2093502 chr06:002093502 0 W/2093502-2093502 FN-361 Single Base Substitution T-A INTRON HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN-162.SNP.6:2094578 chr06:002094578 0 W/2094578-2094578 FN-162 Single Base Substitution C-T UTR_5_PRIME HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN3319-S.SNP.6:2099742 chr06:002099742 0 W/2099742-2099742 FN3319-S SNP T -> C AC=1;AN=184;BQB=0.298357;DP=3235;DP4=1194,1844,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95365e-09;MQSB=0.567879;RPB=0.993034;SGB=33.3622;VDB=0.488148;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.6:2101927 chr06:002101927 0 W/2101927-2101927 FN185-2_3_4 SNP T -> C AC=1;AN=188;BQB=2.00602e-05;DP=4160;DP4=2009,2063,30,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06062e-07;MQSB=0.981103;RPB=0.98532;SGB=-785.684;VDB=0.393264;EFF=INTRON(MODIFIER||||340|LOC_Os06g04820|protein_coding|CODING|LOC_Os06g04820.1|8|1) FN2724-S.SNP.6:2108232 chr06:002108232 0 W/2108232-2108232 FN2724-S SNP G -> T AC=1;AN=200;BQB=0.992893;DP=4943;DP4=2306,2380,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.13905e-07;MQSB=0.990536;RPB=0.961285;SGB=25.849;VDB=0.690639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T611N|980|LOC_Os06g04830|protein_coding|CODING|LOC_Os06g04830.1|3|1) FN1435-S.SNP.6:2119994 chr06:002119994 0 W/2119994-2119994 FN1435-S Single Base Substitution G-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2558-S.SNP.6:2121699 chr06:002121699 0 W/2121699-2121699 FN2558-S SNP C -> A AC=1;AN=198;BQB=0.889589;DP=4312;DP4=1876,2219,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.9501e-07;MQSB=0.964714;RPB=0.999121;SGB=32.9588;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.6:2122020 chr06:002122020 0 W/2122020-2122020 FN3566-S SNP C -> T AC=1;AN=188;BQB=0.693035;DP=2603;DP4=1243,1288,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.14584e-06;MQSB=0.997002;RPB=0.878778;SGB=32.441;VDB=0.840969;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.6:2125823 chr06:002125823 0 W/2125823-2125823 FN553-S Single Base Substitution C-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2563-S.SNP.6:2127966 chr06:002127966 0 W/2127966-2127966 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.947939;DP=4078;DP4=2141,1716,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63182e-05;MQSB=0.961295;RPB=0.31879;SGB=31.1689;VDB=0.195133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.6:2147047 chr06:002147047 0 W/2147047-2147047 FN2160-S SNP T -> A AC=1;AN=168;BQB=0.0385783;DP=4092;DP4=2106,1939,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.09962e-06;MQSB=0.784189;RPB=0.464204;SGB=-82.6471;VDB=0.844876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.6:2152480 chr06:002152480 0 W/2152480-2152480 FN3967-S SNP C -> G AC=1;AN=182;BQB=0.999305;DP=3001;DP4=1480,1422,10,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.04414e-10;MQSB=0.788067;RPB=0.975575;SGB=75.6874;VDB=0.299395;EFF=UTR_5_PRIME(MODIFIER||73||68|LOC_Os06g04889|protein_coding|CODING|LOC_Os06g04889.1|1|1) FN3947-S.SNP.6:2153645 chr06:002153645 0 W/2153645-2153645 FN3947-S SNP G -> A AC=2;AN=168;BQB=0.996425;DP=2484;DP4=1195,1168,26,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.051e-23;MQSB=0.994226;RPB=0.822955;SGB=117.088;VDB=0.0554044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.6:2153646 chr06:002153646 0 W/2153646-2153646 FN3947-S SNP C -> A AC=2;AN=168;BQB=0.99869;DP=2494;DP4=1192,1194,21,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.65367e-21;MQSB=0.995094;RPB=0.823353;SGB=103.364;VDB=0.0204493;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.6:2153647 chr06:002153647 0 W/2153647-2153647 FN3947-S SNP A -> G AC=2;AN=168;BQB=0.999142;DP=2499;DP4=1135,1194,28,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.78348e-25;MQSB=0.892136;RPB=0.973815;SGB=123.949;VDB=0.0398105;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.6:2156930 chr06:002156930 0 W/2156930-2156930 FN477-S Single Base Substitution T-C INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3765-S.SNP.6:2161711 chr06:002161711 0 W/2161711-2161711 FN3765-S SNP T -> C AC=1;AN=190;BQB=0.917272;DP=2538;DP4=1301,1170,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12306e-06;MQSB=0.896926;RPB=0.841421;SGB=10.8904;VDB=0.928815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.6:2169602 chr06:002169602 0 W/2169602-2169602 FN3505-S SNP T -> A AC=1;AN=188;BQB=0.634416;DP=2849;DP4=1162,1516,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.55097e-05;MQSB=0.988685;RPB=0.859697;SGB=-33.2542;VDB=0.253803;EFF=UTR_5_PRIME(MODIFIER||5280||145|LOC_Os06g04920|protein_coding|CODING|LOC_Os06g04920.1|1|1),UTR_5_PRIME(MODIFIER||5280||118|LOC_Os06g04920|protein_coding|CODING|LOC_Os06g04920.2|1|1) FN2664-S.SNP.6:2173649 chr06:002173649 0 W/2173649-2173649 FN2664-S SNP A -> T AC=2;AN=200;BQB=0.494787;DP=5144;DP4=2577,2323,29,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2472e-40;MQSB=0.450854;RPB=0.432762;SGB=88.1433;VDB=0.216144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.6:2182687 chr06:002182687 0 W/2182687-2182687 FN3370-S SNP A -> G AC=2;AN=184;BQB=0.947741;DP=3184;DP4=1463,1618,8,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.09596e-10;MQSB=0.942532;RPB=0.891055;SGB=71.3514;VDB=0.706336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.6:2187615 chr06:002187615 0 W/2187615-2187615 FN2536-S SNP T -> C AC=1;AN=198;BQB=0.861657;DP=3574;DP4=1794,1515,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.56898e-06;MQSB=0.446836;RPB=0.939636;SGB=44.9538;VDB=0.764391;EFF=INTRON(MODIFIER||||341|LOC_Os06g04960|protein_coding|CODING|LOC_Os06g04960.1|2|1) FN2442.SNP.6:2198504 chr06:002198504 0 W/2198504-2198504 FN2442 SNP A -> T AC=1;AN=200;BQB=0.964197;DP=4669;DP4=2400,1974,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.95704e-09;MQSB=0.983095;RPB=0.789046;SGB=47.4799;VDB=0.0477568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.6:2208361 chr06:002208361 0 W/2208361-2208361 FN4135-S SNP G -> C AC=1;AN=182;BQB=0.997728;DP=3302;DP4=1523,1688,13,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.93156e-14;MQSB=0.961405;RPB=0.842221;SGB=102.753;VDB=0.608458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.6:2216350 chr06:002216350 0 W/2216350-2216350 FN1549-S Single Base Substitution G-A INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN-68.SNP.6:2230685 chr06:002230685 0 W/2230685-2230685 FN-68 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g05050 OsWAK61 - OsWAK receptor-like protein kinase, expressed SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2283.SNP.6:2232486 chr06:002232486 0 W/2232486-2232486 FN2283 SNP T -> C AC=1;AN=192;BQB=0.995588;DP=4641;DP4=2155,1944,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215471;MQB=2.44382e-15;MQSB=0.840032;RPB=0.714422;SGB=-5.7391;VDB=0.477769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V585A|755|LOC_Os06g05050|protein_coding|CODING|LOC_Os06g05050.1|5|1) FN2674-S.SNP.6:2234627 chr06:002234627 0 W/2234627-2234627 FN2674-S SNP G -> T AC=1;AN=200;BQB=0.469797;DP=4596;DP4=2189,2122,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34047e-07;MQSB=0.859075;RPB=0.310091;SGB=29.4541;VDB=0.118261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A746E|760|LOC_Os06g05060|protein_coding|CODING|LOC_Os06g05060.1|4|1) FN1117-S.SNP.6:2234788 chr06:002234788 0 W/2234788-2234788 FN1117-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2383.SNP.6:2251654 chr06:002251654 0 W/2251654-2251654 FN2383 SNP C -> T AC=1;AN=192;BQB=0.985633;DP=4655;DP4=2073,2115,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64484e-12;MQSB=0.028821;RPB=0.947655;SGB=39.1713;VDB=0.945184;EFF=UTR_3_PRIME(MODIFIER||134||565|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.5|10|1),INTRON(MODIFIER||||722|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.1|10|1),INTRON(MODIFIER||||611|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.2|10|1),INTRON(MODIFIER||||596|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.4|10|1) FN2579-S.SNP.6:2256434 chr06:002256434 0 W/2256434-2256434 FN2579-S SNP C -> T AC=1;AN=198;BQB=0.542728;DP=3962;DP4=2092,1715,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.28777e-12;MQSB=0.880401;RPB=0.942292;SGB=81.7147;VDB=0.447926;EFF=INTRON(MODIFIER||||722|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.1|1|1),INTRON(MODIFIER||||611|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.2|1|1),INTRON(MODIFIER||||599|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.3|1|1),INTRON(MODIFIER||||596|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.4|1|1),INTRON(MODIFIER||||565|LOC_Os06g05100|protein_coding|CODING|LOC_Os06g05100.5|1|1) FN2173-S.SNP.6:2258784 chr06:002258784 0 W/2258784-2258784 FN2173-S SNP G -> T AC=2;AN=168;BQB=0.0426475;DP=3986;DP4=1979,1938,22,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.07212e-18;MQSB=0.999733;RPB=0.690599;SGB=-208.578;VDB=0.0118121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G195C|255|LOC_Os06g05110|protein_coding|CODING|LOC_Os06g05110.1|5|1),UTR_3_PRIME(MODIFIER||102||209|LOC_Os06g05110|protein_coding|CODING|LOC_Os06g05110.3|4|1) FN417-S.SNP.6:2265751 chr06:002265751 0 W/2265751-2265751 FN417-S Single Base Substitution C-G INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2195-S.SNP.6:2270737 chr06:002270737 0 W/2270737-2270737 FN2195-S SNP T -> C AC=1;AN=190;BQB=0.593134;DP=4914;DP4=2080,2514,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52517e-05;MQSB=0.992543;RPB=0.0291633;SGB=10.8904;VDB=0.032944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.6:2276133 chr06:002276133 0 W/2276133-2276133 FN2136-S SNP C -> G AC=1;AN=168;BQB=0.924643;DP=3673;DP4=1925,1723,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.62955e-11;MQSB=0.991646;RPB=0.946998;SGB=48.4712;VDB=0.303409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P95R|427|LOC_Os06g05130|protein_coding|CODING|LOC_Os06g05130.1|2|1) FN4080-S.SNP.6:2276572 chr06:002276572 0 W/2276572-2276572 FN4080-S SNP T -> A AC=2;AN=182;BQB=0.987054;DP=2853;DP4=1270,1494,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.18787e-16;MQSB=0.911984;RPB=0.920874;SGB=111.774;VDB=0.466628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L208H|427|LOC_Os06g05130|protein_coding|CODING|LOC_Os06g05130.1|3|1) FN3366-S.SNP.6:2277501 chr06:002277501 0 W/2277501-2277501 FN3366-S SNP T -> G AC=1;AN=184;BQB=0.971526;DP=2925;DP4=1493,1355,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.90383e-09;MQSB=0.899968;RPB=0.999994;SGB=62.3078;VDB=0.770478;EFF=INTRON(MODIFIER||||427|LOC_Os06g05130|protein_coding|CODING|LOC_Os06g05130.1|3|1) FN3366-S.SNP.6:2277502 chr06:002277502 0 W/2277502-2277502 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.963614;DP=2928;DP4=1499,1356,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.67053e-09;MQSB=0.839431;RPB=0.991142;SGB=42.7914;VDB=0.835093;EFF=INTRON(MODIFIER||||427|LOC_Os06g05130|protein_coding|CODING|LOC_Os06g05130.1|3|1) FN1113-S.SNP.6:2277977 chr06:002277977 0 W/2277977-2277977 FN1113-S Single Base Substitution C-T INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2275-S.SNP.6:2281446 chr06:002281446 0 W/2281446-2281446 FN2275-S SNP T -> G AC=1;AN=190;BQB=0.825979;DP=4788;DP4=2146,2258,21,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000417711;MQB=8.72007e-18;MQSB=0.956913;RPB=0.893534;SGB=82.3989;VDB=0.128211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.6:2282058 chr06:002282058 0 W/2282058-2282058 FN2202-S SNP C -> A AC=1;AN=190;BQB=0.134434;DP=5244;DP4=2588,2165,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.28834e-06;MQSB=0.998463;RPB=0.211942;SGB=2.55724;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN-88.SNP.6:2299324 chr06:002299324 0 W/2299324-2299324 FN-88 Single Base Substitution T-C INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN533-S.SNP.6:2305078 chr06:002305078 0 W/2305078-2305078 FN533-S Single Base Substitution C-A INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2302.SNP.6:2305149 chr06:002305149 0 W/2305149-2305149 FN2302 SNP G -> T AC=1;AN=192;BQB=0.972349;DP=5257;DP4=2338,2618,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00380445;MQB=3.02647e-11;MQSB=0.385605;RPB=0.3116;SGB=27.6913;VDB=0.841969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.6:2307077 chr06:002307077 0 W/2307077-2307077 FN1134-S Single Base Substitution T-C INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN762-S.SNP.6:2311829 chr06:002311829 0 W/2311829-2311829 FN762-S Single Base Substitution G-A INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN3727-S.SNP.6:2317739 chr06:002317739 0 W/2317739-2317739 FN3727-S SNP G -> A AC=1;AN=190;BQB=0.990182;DP=2496;DP4=1332,1080,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15022e-06;MQSB=0.838421;RPB=0.612951;SGB=39.9877;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.6:2321477 chr06:002321477 0 W/2321477-2321477 FN3692-S SNP C -> G AC=1;AN=190;BQB=0.933114;DP=3161;DP4=1424,1544,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.70325e-06;MQSB=0.81114;RPB=0.933844;SGB=13.4442;VDB=0.30917;EFF=INTRON(MODIFIER||||328|LOC_Os06g05180|protein_coding|CODING|LOC_Os06g05180.3|9|1),INTRON(MODIFIER||||184|LOC_Os06g05180|protein_coding|CODING|LOC_Os06g05180.4|7|1) FN1209-S.SNP.6:2321629 chr06:002321629 0 W/2321629-2321629 FN1209-S Single Base Substitution C-A INTRON HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2559-S.SNP.6:2334904 chr06:002334904 0 W/2334904-2334904 FN2559-S SNP C -> A AC=1;AN=198;BQB=0.533164;DP=4210;DP4=2113,1872,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.72147e-06;MQSB=0.977314;RPB=0.815969;SGB=29.3637;VDB=0.361713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.6:2335636 chr06:002335636 0 W/2335636-2335636 FN3799-S SNP C -> A AC=1;AN=190;BQB=0.990641;DP=2418;DP4=1267,1059,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91284e-07;MQSB=0.753411;RPB=0.968133;SGB=36.1006;VDB=0.129369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.6:2338376 chr06:002338376 0 W/2338376-2338376 FN2301 SNP A -> G AC=1;AN=192;BQB=0.529529;DP=5165;DP4=2229,2521,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000193611;MQB=2.18235e-09;MQSB=0.901163;RPB=0.401864;SGB=4.22611;VDB=0.895067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.6:2339878 chr06:002339878 0 W/2339878-2339878 FN3591-S SNP A -> G AC=1;AN=188;BQB=0.993072;DP=3043;DP4=1420,1522,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.70034e-11;MQSB=0.959339;RPB=0.454006;SGB=57.244;VDB=0.256391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.6:2342956 chr06:002342956 0 W/2342956-2342956 FN3396-S SNP G -> A AC=1;AN=184;BQB=0.980481;DP=2759;DP4=1581,1112,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64651e-06;MQSB=0.435336;RPB=0.655513;SGB=48.7425;VDB=0.979791;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.6:2348079 chr06:002348079 0 W/2348079-2348079 FN1042-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1675-S.SNP.6:2349528 chr06:002349528 0 W/2349528-2349528 FN1675-S SNP G -> C AC=1;AN=188;BQB=0.980244;DP=2171;DP4=1440,701,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07302e-06;MQSB=0.982408;RPB=0.859439;SGB=15.903;VDB=0.268132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G1392A|1399|LOC_Os06g05230|protein_coding|CODING|LOC_Os06g05230.1|6|1) FN1275-S.SNP.6:2383215 chr06:002383215 0 W/2383215-2383215 FN1275-S Single Base Substitution G-A INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN1327-S.SNP.6:2386149 chr06:002386149 0 W/2386149-2386149 FN1327-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g05300 transferase family protein, putative, expressed SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2667-S.SNP.6:2396521 chr06:002396521 0 W/2396521-2396521 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.999916;DP=4535;DP4=2072,2284,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.31443e-10;MQSB=0.876022;RPB=0.920301;SGB=68.0801;VDB=0.822283;EFF=UTR_3_PRIME(MODIFIER||106||485|LOC_Os06g05320|protein_coding|CODING|LOC_Os06g05320.1|2|1) FN1476-S.SNP.6:2398164 chr06:002398164 0 W/2398164-2398164 FN1476-S Single Base Substitution A-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3834-S.SNP.6:2419806 chr06:002419806 0 W/2419806-2419806 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.695366;DP=2571;DP4=1129,1378,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48549e-06;MQSB=0.90783;RPB=0.950821;SGB=53.6492;VDB=0.664012;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q112*|143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1),STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q112*|143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1) FN-217.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN-217 Single Base Substitution C-T INTRON HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-238.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN-238 Single Base Substitution C-T INTRON HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1045-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN1045-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1117-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN1117-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1526-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN1526-S Single Base Substitution C-T UTR_3_PRIME Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1640-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN1640-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1719-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN1719-S SNP C -> T AC=2;AN=188;BQB=0.956327;DP=3799;DP4=1937,1798,21,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.44136e-22;MQSB=0.993645;RPB=0.994099;SGB=84.5719;VDB=0.81174;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN2119-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN2119-S SNP C -> T AC=1;AN=168;BQB=0.176632;DP=4071;DP4=2051,1972,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.74895e-08;MQSB=0.983156;RPB=0.860656;SGB=-98.0622;VDB=0.702304;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN2326.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN2326 SNP C -> T AC=1;AN=192;BQB=0.557236;DP=5274;DP4=2490,2424,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.20014e-16;MQSB=0.990778;RPB=0.645729;SGB=26.127;VDB=0.0199907;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN3659-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN3659-S SNP C -> T AC=2;AN=190;BQB=0.798739;DP=2888;DP4=1391,1398,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.92085e-13;MQSB=0.924166;RPB=0.708446;SGB=112.85;VDB=0.897757;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN4064-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN4064-S SNP C -> T AC=2;AN=168;BQB=0.907947;DP=2738;DP4=1374,1247,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.24957e-10;MQSB=0.999883;RPB=0.992954;SGB=83.1885;VDB=0.264846;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN4113-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN4113-S SNP C -> T AC=1;AN=182;BQB=0.791784;DP=2775;DP4=1397,1285,20,22;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.04857e-21;MQSB=0.999196;RPB=0.754136;SGB=183.948;VDB=0.830806;EFF=UTR_3_PRIME(MODIFIER||1126||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.1|1|1),INTRON(MODIFIER||||143|LOC_Os06g05368|protein_coding|CODING|LOC_Os06g05368.2|1|1) FN573-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN573-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN666-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN666-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN976-S.SNP.6:2421030 chr06:002421030 0 W/2421030-2421030 FN976-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN501-S.SNP.6:2435792 chr06:002435792 0 W/2435792-2435792 FN501-S Single Base Substitution T-C INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN3512-S.SNP.6:2448077 chr06:002448077 0 W/2448077-2448077 FN3512-S SNP C -> T AC=1;AN=188;BQB=0.937037;DP=2945;DP4=1320,1538,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.68452e-12;MQSB=0.957358;RPB=0.996481;SGB=80.782;VDB=0.907029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.6:2450003 chr06:002450003 0 W/2450003-2450003 FN2795-S SNP C -> A AC=1;AN=188;BQB=0.829535;DP=4156;DP4=1760,2185,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.11747e-12;MQSB=0.852377;RPB=0.960383;SGB=90.9049;VDB=0.906276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.6:2450247 chr06:002450247 0 W/2450247-2450247 FN2600-S SNP T -> A AC=1;AN=188;BQB=0.683824;DP=4164;DP4=2141,1737,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.7917e-10;MQSB=0.608208;RPB=0.381033;SGB=-35.8307;VDB=0.979509;EFF=UTR_3_PRIME(MODIFIER||396||91|LOC_Os06g05424|protein_coding|CODING|LOC_Os06g05424.1|2|1) FN343-S.SNP.6:2452028 chr06:002452028 0 W/2452028-2452028 FN343-S Single Base Substitution A-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3926-S.SNP.6:2457199 chr06:002457199 0 W/2457199-2457199 FN3926-S SNP A -> T AC=1;AN=158;BQB=0.268553;DP=2631;DP4=1280,1251,15,18;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.04157e-10;MQSB=0.828383;RPB=0.945318;SGB=101.462;VDB=0.979829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.6:2459982 chr06:002459982 0 W/2459982-2459982 FN3530-S SNP C -> A AC=1;AN=188;BQB=0.847254;DP=2925;DP4=1507,1216,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.26865e-11;MQSB=0.885234;RPB=0.76653;SGB=67.1521;VDB=0.886326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.6:2459983 chr06:002459983 0 W/2459983-2459983 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.980465;DP=2920;DP4=1516,1282,14,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.07273e-12;MQSB=0.936917;RPB=0.254615;SGB=31.1628;VDB=0.582227;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.6:2472193 chr06:002472193 0 W/2472193-2472193 FN-268 Single Base Substitution T-A INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1076-S.SNP.6:2474429 chr06:002474429 0 W/2474429-2474429 FN1076-S Single Base Substitution A-G INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3695-S.SNP.6:2485908 chr06:002485908 0 W/2485908-2485908 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.949718;DP=3105;DP4=1231,1769,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0679549;MQB=0.968717;MQSB=0.000715933;RPB=0.4093;SGB=30.8803;VDB=0.169891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1352L|1688|LOC_Os06g05500|protein_coding|CODING|LOC_Os06g05500.1|10|1) FN3820-S.SNP.6:2492546 chr06:002492546 0 W/2492546-2492546 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.931352;DP=2916;DP4=1406,1402,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00342936;MQB=4.95604e-05;MQSB=7.48564e-05;RPB=0.76921;SGB=53.6492;VDB=0.105662;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R249Q|1688|LOC_Os06g05500|protein_coding|CODING|LOC_Os06g05500.1|1|1) FN2638-S.SNP.6:2495898 chr06:002495898 0 W/2495898-2495898 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.984067;DP=5020;DP4=2494,2254,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199203;MQB=6.9207e-13;MQSB=0.81231;RPB=0.999703;SGB=42.5108;VDB=0.323957;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.6:2496126 chr06:002496126 0 W/2496126-2496126 FN863-S Single Base Substitution A-T INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3728-S.SNP.6:2496979 chr06:002496979 0 W/2496979-2496979 FN3728-S SNP G -> A AC=1;AN=190;BQB=0.970785;DP=2525;DP4=1273,1147,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.00996e-08;MQSB=0.959941;RPB=0.691192;SGB=58.2031;VDB=0.849606;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.6:2515719 chr06:002515719 0 W/2515719-2515719 FN465-S Single Base Substitution T-C INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2192-S.SNP.6:2517523 chr06:002517523 0 W/2517523-2517523 FN2192-S SNP C -> A AC=2;AN=190;BQB=0.443167;DP=4663;DP4=2045,2296,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2243e-10;MQSB=0.660695;RPB=0.981931;SGB=22.7576;VDB=0.906672;EFF=UTR_3_PRIME(MODIFIER||19||351|LOC_Os06g05550|protein_coding|CODING|LOC_Os06g05550.1|5|1) FN2360.SNP.6:2518011 chr06:002518011 0 W/2518011-2518011 FN2360 SNP T -> A AC=2;AN=192;BQB=0.714389;DP=5189;DP4=2185,2725,22,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.15636e-25;MQSB=0.151259;RPB=0.683037;SGB=204.398;VDB=0.23195;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.6:2519912 chr06:002519912 0 W/2519912-2519912 FN_949-1 Single Base Substitution A-G HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN4149-S.SNP.6:2523938 chr06:002523938 0 W/2523938-2523938 FN4149-S SNP C -> T AC=1;AN=170;BQB=0.803606;DP=2539;DP4=1368,1100,11,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00590784;MQB=1.4183e-05;MQSB=0.942699;RPB=0.816566;SGB=24.7692;VDB=0.184881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.6:2527498 chr06:002527498 0 W/2527498-2527498 FN3857-S SNP G -> A AC=2;AN=158;BQB=0.916466;DP=2864;DP4=1286,1469,13,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.61756e-19;MQSB=0.929315;RPB=0.321392;SGB=101.462;VDB=0.29967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.6:2529352 chr06:002529352 0 W/2529352-2529352 FN3470-S SNP C -> G AC=1;AN=184;BQB=0.766209;DP=3036;DP4=1147,1789,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67937e-14;MQSB=0.992868;RPB=0.801569;SGB=98.4821;VDB=0.399297;EFF=INTRON(MODIFIER||||393|LOC_Os06g05580|protein_coding|CODING|LOC_Os06g05580.2|1|1),INTRON(MODIFIER||||393|LOC_Os06g05580|protein_coding|CODING|LOC_Os06g05580.1|1|1) FN-62.SNP.6:2539570 chr06:002539570 0 W/2539570-2539570 FN-62 Single Base Substitution C-G INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1582-S.SNP.6:2540280 chr06:002540280 0 W/2540280-2540280 FN1582-S Single Base Substitution T-A INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN904-S.SNP.6:2541110 chr06:002541110 0 W/2541110-2541110 FN904-S Single Base Substitution G-A INTERGENIC HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1650-S.SNP.6:2546873 chr06:002546873 0 W/2546873-2546873 FN1650-S Single Base Substitution C-A UTR_5_PRIME Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN818-S.SNP.6:2560505 chr06:002560505 0 W/2560505-2560505 FN818-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN-78.SNP.6:2561219 chr06:002561219 0 W/2561219-2561219 FN-78 Single Base Substitution T-A INTRON HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN-78.SNP.6:2561220 chr06:002561220 0 W/2561220-2561220 FN-78 Single Base Substitution T-A INTRON HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2596-S.SNP.6:2563271 chr06:002563271 0 W/2563271-2563271 FN2596-S SNP T -> G AC=1;AN=198;BQB=0.682688;DP=3654;DP4=1287,2195,5,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47719e-09;MQSB=0.965522;RPB=0.155088;SGB=42.3199;VDB=0.0549861;EFF=INTERGENIC(MODIFIER||||||||||1) FN2158-S.SNP.6:2564679 chr06:002564679 0 W/2564679-2564679 FN2158-S SNP A -> G AC=2;AN=168;BQB=0.801385;DP=1899;DP4=864,967,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.0874e-09;MQSB=0.454035;RPB=0.939065;SGB=34.3388;VDB=0.236641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.6:2576921 chr06:002576921 0 W/2576921-2576921 FN1422-S Single Base Substitution G-A INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN-279.SNP.6:2580015 chr06:002580015 0 W/2580015-2580015 FN-279 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN548-S.SNP.6:2581039 chr06:002581039 0 W/2581039-2581039 FN548-S Single Base Substitution A-T INTRON HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-68.SNP.6:2582811 chr06:002582811 0 W/2582811-2582811 FN-68 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2412.SNP.6:2596531 chr06:002596531 0 W/2596531-2596531 FN2412 SNP G -> A AC=1;AN=200;BQB=0.304543;DP=3836;DP4=1896,1581,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.54847e-10;MQSB=0.174997;RPB=0.641078;SGB=58.2954;VDB=0.851202;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.6:2597020 chr06:002597020 0 W/2597020-2597020 FN-150 Single Base Substitution G-A INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN501-S.SNP.6:2597821 chr06:002597821 0 W/2597821-2597821 FN501-S Single Base Substitution C-A INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2688-S.SNP.6:2603089 chr06:002603089 0 W/2603089-2603089 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.742825;DP=4629;DP4=2338,2032,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216029;MQB=0.00137502;MQSB=0.043659;RPB=0.867595;SGB=15.0344;VDB=0.743816;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.6:2603152 chr06:002603152 0 W/2603152-2603152 FN2539-S SNP G -> A AC=1;AN=188;BQB=0.729535;DP=3276;DP4=1397,1543,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03388e-05;MQSB=0.0588226;RPB=0.808054;SGB=44.9538;VDB=0.0504261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1406-S.SNP.6:2607124 chr06:002607124 0 W/2607124-2607124 FN1406-S Single Base Substitution T-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3323-S.SNP.6:2609967 chr06:002609967 0 W/2609967-2609967 FN3323-S SNP C -> A AC=1;AN=184;BQB=0.964025;DP=2569;DP4=1126,1350,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.09031e-08;MQSB=0.97727;RPB=0.182004;SGB=32.2261;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.6:2609995 chr06:002609995 0 W/2609995-2609995 FN4255-S SNP T -> A AC=1;AN=170;BQB=0.960225;DP=2286;DP4=1047,1168,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.72485e-09;MQSB=0.995332;RPB=0.0610466;SGB=65.6427;VDB=0.178899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.6:2610397 chr06:002610397 0 W/2610397-2610397 FN3698-S SNP T -> G AC=1;AN=190;BQB=0.872891;DP=2362;DP4=1199,1088,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.66267e-06;MQSB=0.988898;RPB=0.957712;SGB=35.4339;VDB=0.0885475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.6:2610806 chr06:002610806 0 W/2610806-2610806 FN2439 SNP T -> C AC=1;AN=200;BQB=0.575756;DP=4759;DP4=2207,2279,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.09424e-08;MQSB=0.95802;RPB=0.999234;SGB=40.2696;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.6:2613565 chr06:002613565 0 W/2613565-2613565 FN1575-S Single Base Substitution T-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN4116-S.SNP.6:2616834 chr06:002616834 0 W/2616834-2616834 FN4116-S SNP G -> T AC=1;AN=182;BQB=0.854664;DP=3199;DP4=1869,1267,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000937793;MQB=1.57924e-06;MQSB=0.958668;RPB=0.891825;SGB=42.6494;VDB=0.261829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R60L|1810|LOC_Os06g05780|protein_coding|CODING|LOC_Os06g05780.1|2|1) FN-341.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN-341 Single Base Substitution C-T INTRON HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-98.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN-98 Single Base Substitution C-T INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1203-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN1203-S Single Base Substitution C-T INTRON HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1279-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN1279-S Single Base Substitution C-T INTRON HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1468-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN1468-S Single Base Substitution C-T INTRON Homo SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1531-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN1531-S Single Base Substitution C-T INTRON HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2638-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN2638-S SNP C -> T AC=2;AN=200;BQB=0.455981;DP=4735;DP4=1834,2615,25,26;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.0225977;MQB=0.00343354;MQSB=1.2739e-06;RPB=0.537383;SGB=173.661;VDB=0.858982;EFF=INTRON(MODIFIER||||1810|LOC_Os06g05780|protein_coding|CODING|LOC_Os06g05780.1|2|1) FN3729-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.485975;DP=2590;DP4=1003,1459,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0366795;MQB=0.853445;MQSB=1.31488e-07;RPB=0.309992;SGB=46.7622;VDB=0.918524;EFF=INTRON(MODIFIER||||1810|LOC_Os06g05780|protein_coding|CODING|LOC_Os06g05780.1|2|1) FN4017-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.544938;DP=2807;DP4=1011,1684,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0331315;MQB=0.160808;MQSB=3.8239e-07;RPB=0.27711;SGB=27.8864;VDB=0.100991;EFF=INTRON(MODIFIER||||1810|LOC_Os06g05780|protein_coding|CODING|LOC_Os06g05780.1|2|1) FN473-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN473-S Single Base Substitution C-T INTRON HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN631-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN631-S Single Base Substitution C-T INTRON HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN702-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN702-S Single Base Substitution C-T INTRON HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN794-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN794-S Single Base Substitution C-T INTRON HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN809-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN809-S Single Base Substitution C-T INTRON HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN863-S.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 FN863-S Single Base Substitution C-T INTRON HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. W472-5-1.SNP.6:2617627 chr06:002617627 0 W/2617627-2617627 W472-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN747-S.SNP.6:2622009 chr06:002622009 0 W/2622009-2622009 FN747-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g05780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3492-S.SNP.6:2623447 chr06:002623447 0 W/2623447-2623447 FN3492-S SNP C -> T AC=1;AN=184;BQB=0.785021;DP=2679;DP4=1285,1299,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00970511;MQB=6.09234e-08;MQSB=0.652872;RPB=0.196605;SGB=8.32411;VDB=0.568204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.6:2623557 chr06:002623557 0 W/2623557-2623557 FN2356 SNP G -> A AC=1;AN=192;BQB=0.460316;DP=4668;DP4=2437,1773,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.150814;MQB=0.103233;MQSB=0;RPB=0.0419044;SGB=54.5574;VDB=0.256404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.6:2627441 chr06:002627441 0 W/2627441-2627441 FN2378 SNP C -> A AC=1;AN=192;BQB=0.999036;DP=4910;DP4=2285,2235,21,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000814664;MQB=1.14905e-17;MQSB=0.905558;RPB=0.91987;SGB=-2.91736;VDB=0.609969;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.6:2629341 chr06:002629341 0 W/2629341-2629341 FN-199 Single Base Substitution G-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-286.SNP.6:2641670 chr06:002641670 0 W/2641670-2641670 FN-286 Single Base Substitution C-G INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-286.SNP.6:2641675 chr06:002641675 0 W/2641675-2641675 FN-286 Single Base Substitution A-G INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-286.SNP.6:2641730 chr06:002641730 0 W/2641730-2641730 FN-286 Single Base Substitution C-T INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2797-S.SNP.6:2645368 chr06:002645368 0 W/2645368-2645368 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.996889;DP=4027;DP4=1881,1740,34,20;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=4.43233e-20;MQSB=8.50438e-07;RPB=0.621529;SGB=125.364;VDB=0.702542;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.6:2646026 chr06:002646026 0 W/2646026-2646026 FN456-S Single Base Substitution G-A STOP_GAINED HET LOC_Os06g05810 transposon protein, putative, unclassified SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2795-S.SNP.6:2648033 chr06:002648033 0 W/2648033-2648033 FN2795-S SNP C -> T AC=1;AN=188;BQB=0.678692;DP=3226;DP4=1765,1305,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.71586e-10;MQSB=0.716561;RPB=0.595315;SGB=95.5;VDB=0.804417;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.6:2655864 chr06:002655864 0 W/2655864-2655864 FN809-S Single Base Substitution G-A INTRON HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN4078-S.SNP.6:2670685 chr06:002670685 0 W/2670685-2670685 FN4078-S SNP A -> T AC=1;AN=182;BQB=0.993265;DP=3096;DP4=1504,1218,36,54;HOB=6.03792e-05;ICB=0.000121422;MQ=27;MQ0F=0.153747;MQB=8.76534e-17;MQSB=1.1571e-08;RPB=0.00123648;SGB=-1142.12;VDB=2.2644e-16;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R1839|1908|LOC_Os06g05850|protein_coding|CODING|LOC_Os06g05850.1|5|1) FN2334.SNP.6:2681049 chr06:002681049 0 W/2681049-2681049 FN2334 SNP G -> A AC=1;AN=192;BQB=0.581042;DP=5031;DP4=2537,2242,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.5453e-12;MQSB=0.985882;RPB=0.634705;SGB=-11.9469;VDB=0.417301;EFF=INTRON(MODIFIER||||181|LOC_Os06g05870|protein_coding|CODING|LOC_Os06g05870.2|2|1),INTRON(MODIFIER||||558|LOC_Os06g05860|protein_coding|CODING|LOC_Os06g05860.1|9|1) FN2317.SNP.6:2689359 chr06:002689359 0 W/2689359-2689359 FN2317 SNP T -> A AC=1;AN=192;BQB=0.976817;DP=5090;DP4=2315,2349,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.085e-09;MQSB=0.99809;RPB=0.433878;SGB=-11.9469;VDB=0.288873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.6:2690082 chr06:002690082 0 W/2690082-2690082 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.536227;DP=4442;DP4=2136,2046,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.59514e-15;MQSB=0.403461;RPB=0.528068;SGB=123.342;VDB=0.984266;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.6:2692577 chr06:002692577 0 W/2692577-2692577 FN-94 Single Base Substitution A-T INTRON HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN732-S.SNP.6:2692577 chr06:002692577 0 W/2692577-2692577 FN732-S Single Base Substitution A-T INTRON HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN1732-S.SNP.6:2695288 chr06:002695288 0 W/2695288-2695288 FN1732-S SNP T -> C AC=1;AN=188;BQB=0.776641;DP=2181;DP4=948,1193,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22507e-08;MQSB=0.953371;RPB=0.928667;SGB=28.6195;VDB=0.377526;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.6:2696771 chr06:002696771 0 W/2696771-2696771 FN986-S Single Base Substitution C-A INTRON HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2217-S.SNP.6:2701239 chr06:002701239 0 W/2701239-2701239 FN2217-S SNP T -> A AC=2;AN=190;BQB=0.79478;DP=4961;DP4=2502,2237,13,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000201572;MQB=1.25232e-17;MQSB=0.997752;RPB=0.979599;SGB=126.511;VDB=0.358325;EFF=INTRON(MODIFIER||||327|LOC_Os06g05900|protein_coding|CODING|LOC_Os06g05900.1|3|1) FN1249-S.SNP.6:2710095 chr06:002710095 0 W/2710095-2710095 FN1249-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN3437-S.SNP.6:2713180 chr06:002713180 0 W/2713180-2713180 FN3437-S SNP G -> T AC=1;AN=184;BQB=0.759708;DP=2699;DP4=1114,1484,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.75265e-07;MQSB=0.886729;RPB=0.763964;SGB=39.699;VDB=0.551647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.6:2713182 chr06:002713182 0 W/2713182-2713182 FN3437-S SNP A -> T AC=1;AN=184;BQB=0.660018;DP=2676;DP4=1092,1479,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.04195e-07;MQSB=0.976841;RPB=0.82268;SGB=0.715177;VDB=0.423217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.6:2716512 chr06:002716512 0 W/2716512-2716512 FN2596-S SNP A -> G AC=2;AN=188;BQB=0.996697;DP=4207;DP4=1852,2114,34,32;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68869e-35;MQSB=0.828785;RPB=0.0484891;SGB=179.347;VDB=0.60615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.6:2719032 chr06:002719032 0 W/2719032-2719032 FN2279-S SNP G -> T AC=1;AN=190;BQB=0.194675;DP=5098;DP4=2160,2452,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51347e-07;MQSB=0.999623;RPB=0.1132;SGB=-60.3192;VDB=0.253296;EFF=INTRON(MODIFIER||||547|LOC_Os06g05940|protein_coding|CODING|LOC_Os06g05940.1|3|1) FN1481-S.SNP.6:2719636 chr06:002719636 0 W/2719636-2719636 FN1481-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g05940 DTA2, putative, expressed SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN601-S.SNP.6:2721781 chr06:002721781 0 W/2721781-2721781 FN601-S Single Base Substitution T-A INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN524-S.SNP.6:2722477 chr06:002722477 0 W/2722477-2722477 FN524-S Single Base Substitution T-A INTERGENIC HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1219-S.SNP.6:2724194 chr06:002724194 0 W/2724194-2724194 FN1219-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3677-S.SNP.6:2738829 chr06:002738829 0 W/2738829-2738829 FN3677-S SNP G -> T AC=2;AN=190;BQB=0.974497;DP=2287;DP4=1157,991,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.17589e-12;MQSB=0.929244;RPB=0.786059;SGB=103.742;VDB=0.197286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H99N|203|LOC_Os06g05970|protein_coding|CODING|LOC_Os06g05970.1|2|1) FN2755-S.SNP.6:2740088 chr06:002740088 0 W/2740088-2740088 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.236028;DP=5117;DP4=2332,2514,7,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000195427;MQB=3.52093e-15;MQSB=0.482087;RPB=0.615897;SGB=22.3313;VDB=0.310847;EFF=INTRON(MODIFIER||||203|LOC_Os06g05970|protein_coding|CODING|LOC_Os06g05970.1|1|1) FN-114.SNP.6:2751666 chr06:002751666 0 W/2751666-2751666 FN-114 Single Base Substitution G-A INTRON HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3844-S.SNP.6:2768036 chr06:002768036 0 W/2768036-2768036 FN3844-S SNP T -> G AC=2;AN=190;BQB=0.995656;DP=2714;DP4=1304,1279,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.322e-17;MQSB=0.999983;RPB=0.812743;SGB=117.403;VDB=0.740981;EFF=INTRON(MODIFIER||||337|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.1|5|1),INTRON(MODIFIER||||337|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.3|5|1),INTRON(MODIFIER||||330|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.4|4|1) FN4178-S.SNP.6:2768301 chr06:002768301 0 W/2768301-2768301 FN4178-S SNP G -> A AC=2;AN=170;BQB=0.957967;DP=2672;DP4=1276,1309,20,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.20474e-18;MQSB=0.876555;RPB=0.990758;SGB=141.168;VDB=0.294971;EFF=INTRON(MODIFIER||||337|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.1|5|1),INTRON(MODIFIER||||337|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.3|5|1),INTRON(MODIFIER||||330|LOC_Os06g06014|protein_coding|CODING|LOC_Os06g06014.4|4|1) FN1318-S.SNP.6:2780086 chr06:002780086 0 W/2780086-2780086 FN1318-S Single Base Substitution C-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2331.SNP.6:2781837 chr06:002781837 0 W/2781837-2781837 FN2331 SNP A -> T AC=1;AN=192;BQB=0.752514;DP=5195;DP4=2197,2337,24,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15612e-18;MQSB=0.996459;RPB=0.867073;SGB=-47.5261;VDB=0.452071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E347V|720|LOC_Os06g06050|protein_coding|CODING|LOC_Os06g06050.1|1|1) FN3687-S.SNP.6:2790279 chr06:002790279 0 W/2790279-2790279 FN3687-S SNP C -> G AC=1;AN=190;BQB=0.998014;DP=2328;DP4=1110,1134,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.109536;MQB=0.84932;MQSB=1.75304e-33;RPB=0.940059;SGB=26.2136;VDB=0.946589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.6:2792366 chr06:002792366 0 W/2792366-2792366 FN1458-S Single Base Substitution A-T INTRON HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3957-S.SNP.6:2793833 chr06:002793833 0 W/2793833-2793833 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.981183;DP=2520;DP4=1183,1225,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0031746;MQB=0.00137653;MQSB=0.0196797;RPB=0.627888;SGB=22.1847;VDB=0.324125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.6:2795088 chr06:002795088 0 W/2795088-2795088 FN1715-S SNP T -> G AC=2;AN=188;BQB=0.817256;DP=4068;DP4=2089,1914,25,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.28964e-17;MQSB=0.994573;RPB=0.439631;SGB=84.5719;VDB=0.664245;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.6:2798807 chr06:002798807 0 W/2798807-2798807 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.871406;DP=2586;DP4=851,1628,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.18593e-06;MQSB=0.433317;RPB=0.40222;SGB=25.0952;VDB=0.364597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.6:2804514 chr06:002804514 0 W/2804514-2804514 FN1634-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2754-S.SNP.6:2810472 chr06:002810472 0 W/2810472-2810472 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.924002;DP=4928;DP4=2311,2359,5,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=3.23119e-06;MQSB=0.00297767;RPB=0.617967;SGB=29.4541;VDB=0.179012;EFF=INTRON(MODIFIER||||398|LOC_Os06g06090|protein_coding|CODING|LOC_Os06g06090.1|2|1),INTRON(MODIFIER||||350|LOC_Os06g06090|protein_coding|CODING|LOC_Os06g06090.2|2|1) FN1556-S.SNP.6:2817414 chr06:002817414 0 W/2817414-2817414 FN1556-S Single Base Substitution A-C INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN3743-S.SNP.6:2817480 chr06:002817480 0 W/2817480-2817480 FN3743-S SNP C -> T AC=2;AN=190;BQB=0.811528;DP=1888;DP4=1005,778,11,13;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0233051;MQB=0.117373;MQSB=1.45883e-16;RPB=0.956307;SGB=103.742;VDB=0.944008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.6:2817857 chr06:002817857 0 W/2817857-2817857 FN3512-S SNP C -> T AC=1;AN=188;BQB=0.992857;DP=2723;DP4=1342,1313,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.0209328;MQB=0.69346;MQSB=0;RPB=0.993911;SGB=30.8063;VDB=0.888218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.6:2838128 chr06:002838128 0 W/2838128-2838128 FN2479 SNP A -> G AC=1;AN=200;BQB=0.869022;DP=4168;DP4=2086,1783,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37453e-12;MQSB=0.605209;RPB=0.963897;SGB=50.3263;VDB=0.780252;EFF=INTRON(MODIFIER||||949|LOC_Os06g06130|protein_coding|CODING|LOC_Os06g06130.1|2|1) FN419-S.SNP.6:2838128 chr06:002838128 0 W/2838128-2838128 FN419-S Single Base Substitution A-G INTRON HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN708-S.SNP.6:2838128 chr06:002838128 0 W/2838128-2838128 FN708-S Single Base Substitution A-G INTRON HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3548-S.SNP.6:2845297 chr06:002845297 0 W/2845297-2845297 FN3548-S SNP T -> A AC=1;AN=188;BQB=0.503898;DP=2909;DP4=1361,1440,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000121684;MQSB=0.748622;RPB=0.7431;SGB=32.441;VDB=0.505913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.6:2851258 chr06:002851258 0 W/2851258-2851258 FN3784-S SNP T -> C AC=1;AN=190;BQB=0.907958;DP=2684;DP4=1398,1118,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04051e-10;MQSB=0.897639;RPB=0.355575;SGB=46.7622;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.6:2856947 chr06:002856947 0 W/2856947-2856947 FN2272-S SNP T -> C AC=1;AN=190;BQB=0.991486;DP=4791;DP4=2205,2302,15,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208725;MQB=5.70709e-18;MQSB=0.999997;RPB=0.596111;SGB=117.84;VDB=0.934512;EFF=INTRON(MODIFIER||||353|LOC_Os06g06160|protein_coding|CODING|LOC_Os06g06160.1|2|1),INTRON(MODIFIER||||353|LOC_Os06g06160|protein_coding|CODING|LOC_Os06g06160.2|2|1),INTRON(MODIFIER||||353|LOC_Os06g06160|protein_coding|CODING|LOC_Os06g06160.3|2|1),INTRON(MODIFIER||||353|LOC_Os06g06160|protein_coding|CODING|LOC_Os06g06160.4|2|1),INTRON(MODIFIER||||353|LOC_Os06g06160|protein_coding|CODING|LOC_Os06g06160.5|2|1) FN_N1-151-7.SNP.6:2857972 chr06:002857972 0 W/2857972-2857972 FN_N1-151-7 Single Base Substitution G-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN977-S.SNP.6:2861001 chr06:002861001 0 W/2861001-2861001 FN977-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g06170 expressed protein SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN2166-S.SNP.6:2866718 chr06:002866718 0 W/2866718-2866718 FN2166-S SNP A -> G AC=1;AN=168;BQB=0.118107;DP=3766;DP4=2014,1709,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.30677e-05;MQSB=0.977856;RPB=0.803628;SGB=-38.3665;VDB=0.712175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N505D|643|LOC_Os06g06190|protein_coding|CODING|LOC_Os06g06190.1|8|1) FN2600-S.SNP.6:2870086 chr06:002870086 0 W/2870086-2870086 FN2600-S SNP C -> G AC=1;AN=198;BQB=0.975409;DP=4145;DP4=1875,2037,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.22152e-14;MQSB=0.972967;RPB=0.939816;SGB=76.1002;VDB=0.114119;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.6:2879455 chr06:002879455 0 W/2879455-2879455 FN4128-S SNP C -> A AC=2;AN=182;BQB=0.563209;DP=2759;DP4=1225,1455,6,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.23565e-09;MQSB=0.987865;RPB=0.774824;SGB=66.6657;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.6:2880911 chr06:002880911 0 W/2880911-2880911 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.965061;DP=2999;DP4=1400,1557,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29077e-08;MQSB=0.750883;RPB=0.907092;SGB=-37.2282;VDB=0.819082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.6:2887218 chr06:002887218 0 W/2887218-2887218 FN2688-S SNP A -> T AC=1;AN=200;BQB=0.440306;DP=4762;DP4=2304,2142,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.53418e-07;MQSB=0.0463033;RPB=0.67491;SGB=1.46408;VDB=0.042918;EFF=INTRON(MODIFIER||||52|LOC_Os06g06240|protein_coding|CODING|LOC_Os06g06240.1|1|1) FN1025-S.SNP.6:2893394 chr06:002893394 0 W/2893394-2893394 FN1025-S Single Base Substitution T-G INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3888-S.SNP.6:2901103 chr06:002901103 0 W/2901103-2901103 FN3888-S SNP C -> G AC=1;AN=158;BQB=0.917161;DP=2374;DP4=1185,1088,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08667e-09;MQSB=0.837709;RPB=0.478788;SGB=86.3921;VDB=0.00954458;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H97D|108|LOC_Os06g06270|protein_coding|CODING|LOC_Os06g06270.1|1|1) FN1667-S.SNP.6:2902684 chr06:002902684 0 W/2902684-2902684 FN1667-S SNP C -> T AC=2;AN=188;BQB=0.659543;DP=2005;DP4=1206,729,12,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.76813e-08;MQSB=0.95485;RPB=0.944278;SGB=-61.9025;VDB=0.183457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S119F|368|LOC_Os06g06280|protein_coding|CODING|LOC_Os06g06280.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S119F|360|LOC_Os06g06280|protein_coding|CODING|LOC_Os06g06280.2|1|1) FN836-S.SNP.6:2908679 chr06:002908679 0 W/2908679-2908679 FN836-S Single Base Substitution G-A INTRON HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2651-S.SNP.6:2911417 chr06:002911417 0 W/2911417-2911417 FN2651-S SNP A -> G AC=1;AN=200;BQB=0.952323;DP=4835;DP4=2303,2250,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.74699e-13;MQSB=0.926027;RPB=0.955384;SGB=37.3004;VDB=0.0032715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.6:2914119 chr06:002914119 0 W/2914119-2914119 FN2200-S SNP A -> G AC=1;AN=190;BQB=0.8844;DP=4851;DP4=1980,2541,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20968e-07;MQSB=0.636069;RPB=0.744661;SGB=21.1058;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.6:2917498 chr06:002917498 0 W/2917498-2917498 FN1582-S Single Base Substitution G-C INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN-62.SNP.6:2922270 chr06:002922270 0 W/2922270-2922270 FN-62 Single Base Substitution A-G INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2134-S.SNP.6:2926067 chr06:002926067 0 W/2926067-2926067 FN2134-S SNP A -> C AC=2;AN=168;BQB=0.258915;DP=4120;DP4=1867,2158,32,43;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28198e-38;MQSB=0.986026;RPB=0.148402;SGB=153.788;VDB=0.452292;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.6:2930048 chr06:002930048 0 W/2930048-2930048 FN559-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g06310 expressed protein SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN907-S.SNP.6:2936923 chr06:002936923 0 W/2936923-2936923 FN907-S Single Base Substitution A-T INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-339.SNP.6:2955634 chr06:002955634 0 W/2955634-2955634 FN-339 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g06350 AMP-binding enzyme, putative, expressed SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1192-S.SNP.6:2959765 chr06:002959765 0 W/2959765-2959765 FN1192-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN873-S.SNP.6:2965101 chr06:002965101 0 W/2965101-2965101 FN873-S Single Base Substitution A-C INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-171.SNP.6:2982183 chr06:002982183 0 W/2982183-2982183 FN-171 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g06390 NBS-LRR type disease resistance protein, putative, expressed SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3332-S.SNP.6:2991772 chr06:002991772 0 W/2991772-2991772 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.991656;DP=2764;DP4=1056,1537,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.02136e-12;MQSB=0.973903;RPB=0.218975;SGB=33.3622;VDB=0.589895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.6:2998472 chr06:002998472 0 W/2998472-2998472 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.998718;DP=5188;DP4=2177,2665,13,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.80885e-18;MQSB=0.00300453;RPB=0.982225;SGB=94.3471;VDB=0.512347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.6:3008456 chr06:003008456 0 W/3008456-3008456 FN2231-S SNP T -> A AC=1;AN=190;BQB=0.371217;DP=4885;DP4=2300,2184,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.07625e-08;MQSB=0.956149;RPB=0.836379;SGB=-14.8836;VDB=0.748707;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R265|1474|LOC_Os06g06440|protein_coding|CODING|LOC_Os06g06440.1|1|1) FN3090-S.SNP.6:3010496 chr06:003010496 0 W/3010496-3010496 FN3090-S SNP C -> A AC=2;AN=184;BQB=0.850659;DP=3282;DP4=2006,1146,23,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.72569e-13;MQSB=0.883577;RPB=0.765985;SGB=99.14;VDB=0.0868595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.6:3011059 chr06:003011059 0 W/3011059-3011059 FN2329 SNP C -> T AC=1;AN=192;BQB=0.0760707;DP=4813;DP4=2637,1937,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.26372e-07;MQSB=0.98555;RPB=0.512946;SGB=8.91915;VDB=0.911961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.6:3014034 chr06:003014034 0 W/3014034-3014034 FN-61 Single Base Substitution G-T INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2375.SNP.6:3017071 chr06:003017071 0 W/3017071-3017071 FN2375 SNP G -> A AC=1;AN=192;BQB=0.748675;DP=5074;DP4=2613,2217,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02634e-09;MQSB=0.996492;RPB=0.719337;SGB=43.3444;VDB=0.887042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.6:3017242 chr06:003017242 0 W/3017242-3017242 FN3971-S SNP G -> A AC=2;AN=168;BQB=0.958873;DP=2298;DP4=1052,1162,1,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.23573e-07;MQSB=0.565998;RPB=0.384555;SGB=43.3113;VDB=0.760674;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.6:3020542 chr06:003020542 0 W/3020542-3020542 FN4051-S SNP A -> G AC=1;AN=168;BQB=0.976665;DP=2742;DP4=1367,1274,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.45729e-06;MQSB=0.944019;RPB=0.937007;SGB=38.8805;VDB=0.681429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.6:3023228 chr06:003023228 0 W/3023228-3023228 FN3924-S SNP C -> T AC=1;AN=158;BQB=0.879564;DP=2485;DP4=1088,1298,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000462861;MQSB=0.447533;RPB=0.426763;SGB=23.9652;VDB=0.711662;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.6:3028406 chr06:003028406 0 W/3028406-3028406 FN561-S Single Base Substitution T-C INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2373.SNP.6:3028477 chr06:003028477 0 W/3028477-3028477 FN2373 SNP C -> A AC=1;AN=192;BQB=0.0314711;DP=4437;DP4=2186,1972,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.26663e-14;MQSB=0.605045;RPB=0.729468;SGB=67.3792;VDB=0.778423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.6:3032581 chr06:003032581 0 W/3032581-3032581 FN3385-S SNP A -> G AC=1;AN=184;BQB=0.997039;DP=3154;DP4=1578,1326,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.50397e-05;MQSB=0.999118;RPB=0.477878;SGB=8.14452;VDB=0.433802;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.6:3032896 chr06:003032896 0 W/3032896-3032896 FN399-S Single Base Substitution A-G INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1001-S.SNP.6:3033883 chr06:003033883 0 W/3033883-3033883 FN1001-S Single Base Substitution T-C INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN709-S.SNP.6:3040128 chr06:003040128 0 W/3040128-3040128 FN709-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN3331-S.SNP.6:3040163 chr06:003040163 0 W/3040163-3040163 FN3331-S SNP G -> A AC=1;AN=184;BQB=0.961312;DP=3283;DP4=1548,1615,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07691e-08;MQSB=0.433039;RPB=0.940163;SGB=57.786;VDB=0.0544154;EFF=UTR_3_PRIME(MODIFIER||372||136|LOC_Os06g06460|protein_coding|CODING|LOC_Os06g06460.1|1|1) FN3331-S.SNP.6:3040164 chr06:003040164 0 W/3040164-3040164 FN3331-S SNP A -> T AC=1;AN=184;BQB=0.966309;DP=3299;DP4=1573,1615,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.06912e-09;MQSB=0.505115;RPB=0.749983;SGB=42.7914;VDB=0.0558377;EFF=UTR_3_PRIME(MODIFIER||371||136|LOC_Os06g06460|protein_coding|CODING|LOC_Os06g06460.1|1|1) FN-16.SNP.6:3041654 chr06:003041654 0 W/3041654-3041654 FN-16 Single Base Substitution T-A INTERGENIC Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN-62.SNP.6:3049990 chr06:003049990 0 W/3049990-3049990 FN-62 Single Base Substitution G-T INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2619-S.SNP.6:3054922 chr06:003054922 0 W/3054922-3054922 FN2619-S SNP T -> C AC=1;AN=188;BQB=0.56652;DP=4406;DP4=2021,2083,28,26;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.62502e-31;MQSB=0.828168;RPB=0.11062;SGB=183.954;VDB=0.0717218;EFF=UTR_3_PRIME(MODIFIER||573||287|LOC_Os06g06490|protein_coding|CODING|LOC_Os06g06490.2|8|1),UTR_3_PRIME(MODIFIER||108||343|LOC_Os06g06490|protein_coding|CODING|LOC_Os06g06490.1|7|1) FN4022-S.SNP.6:3054922 chr06:003054922 0 W/3054922-3054922 FN4022-S SNP T -> C AC=1;AN=168;BQB=0.697012;DP=3319;DP4=1501,1621,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50958e-09;MQSB=0.986701;RPB=0.410709;SGB=34.3388;VDB=0.724348;EFF=UTR_3_PRIME(MODIFIER||573||287|LOC_Os06g06490|protein_coding|CODING|LOC_Os06g06490.2|8|1),UTR_3_PRIME(MODIFIER||108||343|LOC_Os06g06490|protein_coding|CODING|LOC_Os06g06490.1|7|1) FN2767-S.SNP.6:3073397 chr06:003073397 0 W/3073397-3073397 FN2767-S SNP C -> T AC=2;AN=198;BQB=0.574043;DP=4478;DP4=2046,2089,25,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.04291e-21;MQSB=0.653609;RPB=0.993998;SGB=201.188;VDB=0.401232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.6:3075204 chr06:003075204 0 W/3075204-3075204 FN1384-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3673-S.SNP.6:3076620 chr06:003076620 0 W/3076620-3076620 FN3673-S SNP T -> C AC=1;AN=190;BQB=0.999676;DP=2681;DP4=1428,1158,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.31983e-08;MQSB=0.955264;RPB=0.289061;SGB=32.5467;VDB=0.28048;EFF=INTRON(MODIFIER||||468|LOC_Os06g06550|protein_coding|CODING|LOC_Os06g06550.1|1|1) FN2334.SNP.6:3085505 chr06:003085505 0 W/3085505-3085505 FN2334 SNP C -> A AC=1;AN=192;BQB=0.998795;DP=5277;DP4=2550,2430,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15539e-07;MQSB=0.815568;RPB=0.297885;SGB=21.2209;VDB=0.398536;EFF=INTRON(MODIFIER||||641|LOC_Os06g06560|protein_coding|CODING|LOC_Os06g06560.1|1|1) FN1734-S.SNP.6:3088930 chr06:003088930 0 W/3088930-3088930 FN1734-S SNP G -> T AC=1;AN=188;BQB=0.273889;DP=3311;DP4=1617,1634,15,14;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000302024;MQB=1.89104e-06;MQSB=0.106439;RPB=0.477299;SGB=-41.4749;VDB=0.890423;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.6:3089527 chr06:003089527 0 W/3089527-3089527 FN-258 Single Base Substitution A-G INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN671-S.SNP.6:3097460 chr06:003097460 0 W/3097460-3097460 FN671-S Single Base Substitution A-T INTRON HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2554-S.SNP.6:3101326 chr06:003101326 0 W/3101326-3101326 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.778156;DP=4014;DP4=2157,1683,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000255136;MQSB=0.995595;RPB=0.751591;SGB=54.144;VDB=0.73286;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.6:3106790 chr06:003106790 0 W/3106790-3106790 FN833-S Single Base Substitution A-T INTRON HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3666-S.SNP.6:3107657 chr06:003107657 0 W/3107657-3107657 FN3666-S SNP A -> G AC=2;AN=190;BQB=0.969566;DP=2854;DP4=1375,1345,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.22085e-19;MQSB=0.814093;RPB=0.81829;SGB=140.173;VDB=0.343237;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.6:3111443 chr06:003111443 0 W/3111443-3111443 FN_N1-130-1 Single Base Substitution G-A Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. N1-130-2.SNP.6:3111443 chr06:003111443 0 W/3111443-3111443 N1-130-2 Single Base Substitution G-A INTERGENIC HET SNo: 1377, Mutant_ID: N1-130-2, Generation: M2, Mutations: 30, Genes: 7, Seed availability: Yes. N1-130-3.SNP.6:3111443 chr06:003111443 0 W/3111443-3111443 N1-130-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. FN1697-S.SNP.6:3112379 chr06:003112379 0 W/3112379-3112379 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.693913;DP=2276;DP4=1237,1005,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.36495e-10;MQSB=0.993263;RPB=0.859832;SGB=23.5329;VDB=0.250301;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L244|625|LOC_Os06g06610|protein_coding|CODING|LOC_Os06g06610.1|1|1) FN835-S.SNP.6:3117597 chr06:003117597 0 W/3117597-3117597 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2788-S.SNP.6:3118418 chr06:003118418 0 W/3118418-3118418 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.881467;DP=3937;DP4=1760,1962,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.26583e-14;MQSB=0.821858;RPB=0.644247;SGB=132.261;VDB=0.999797;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F115|194|LOC_Os06g06630|protein_coding|CODING|LOC_Os06g06630.1|2|1) FN3353-S.SNP.6:3129535 chr06:003129535 0 W/3129535-3129535 FN3353-S SNP C -> T AC=2;AN=184;BQB=0.976675;DP=2834;DP4=1184,1541,9,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32979e-11;MQSB=0.953264;RPB=0.769829;SGB=93.9603;VDB=0.134357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P245S|274|LOC_Os06g06660|protein_coding|CODING|LOC_Os06g06660.1|2|1) FN3715-S.SNP.6:3141570 chr06:003141570 0 W/3141570-3141570 FN3715-S SNP C -> G AC=2;AN=190;BQB=0.588464;DP=2784;DP4=1336,1267,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81523e-11;MQSB=0.781842;RPB=0.959032;SGB=131.065;VDB=0.108027;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.6:3145612 chr06:003145612 0 W/3145612-3145612 FN3887-S SNP G -> C AC=1;AN=158;BQB=0.763683;DP=1716;DP4=904,666,2,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.76051e-05;MQSB=0.735327;RPB=0.0113367;SGB=29.5899;VDB=0.0153953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ctc|V27L|352|LOC_Os06g06720|protein_coding|CODING|LOC_Os06g06720.1|1|1) FN3925-S.SNP.6:3151931 chr06:003151931 0 W/3151931-3151931 FN3925-S SNP T -> C AC=1;AN=158;BQB=0.699568;DP=2429;DP4=1165,1148,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.97652e-08;MQSB=0.966999;RPB=0.931384;SGB=73.2838;VDB=0.404547;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.6:3171910 chr06:003171910 0 W/3171910-3171910 FN1204-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN780-S.SNP.6:3171910 chr06:003171910 0 W/3171910-3171910 FN780-S Single Base Substitution G-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1573-S.SNP.6:3174757 chr06:003174757 0 W/3174757-3174757 FN1573-S Single Base Substitution T-C INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1718-S.SNP.6:3189980 chr06:003189980 0 W/3189980-3189980 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.159418;DP=3948;DP4=1428,2476,8,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1108e-07;MQSB=0.983865;RPB=0.242055;SGB=-128.262;VDB=0.421545;EFF=INTRON(MODIFIER||||430|LOC_Os06g06770|protein_coding|CODING|LOC_Os06g06770.1|12|1) FN_935-1.SNP.6:3198091 chr06:003198091 0 W/3198091-3198091 FN_935-1 Single Base Substitution A-G Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN-285.SNP.6:3211331 chr06:003211331 0 W/3211331-3211331 FN-285 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g06802 retrotransposon protein, putative, unclassified, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN410-S.SNP.6:3219694 chr06:003219694 0 W/3219694-3219694 FN410-S Single Base Substitution C-T INTRON HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2785-S.SNP.6:3227090 chr06:003227090 0 W/3227090-3227090 FN2785-S SNP T -> A AC=1;AN=198;BQB=0.831738;DP=4754;DP4=1900,2520,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0248212;MQB=0.675439;MQSB=1.46995e-23;RPB=0.45012;SGB=86.3098;VDB=0.262305;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctA|L1355|1936|LOC_Os06g06830|protein_coding|CODING|LOC_Os06g06830.1|3|1) FN4016-S.SNP.6:3250306 chr06:003250306 0 W/3250306-3250306 FN4016-S SNP T -> C AC=1;AN=168;BQB=0.688942;DP=2364;DP4=1070,1209,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.49492e-09;MQSB=0.100473;RPB=0.717485;SGB=34.3388;VDB=0.188456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.6:3262870 chr06:003262870 0 W/3262870-3262870 FN2223-S SNP A -> G AC=1;AN=190;BQB=0.957442;DP=4377;DP4=1879,2191,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000228467;MQB=1.72775e-06;MQSB=0.890679;RPB=0.944313;SGB=36.1006;VDB=0.866378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.6:3266452 chr06:003266452 0 W/3266452-3266452 FN2349 SNP A -> T AC=1;AN=192;BQB=0.114253;DP=5161;DP4=2518,2426,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.39773e-12;MQSB=0.912504;RPB=0.208251;SGB=46.8644;VDB=0.543451;EFF=INTRON(MODIFIER||||322|LOC_Os06g06880|protein_coding|CODING|LOC_Os06g06880.1|1|1) FN1419-S.SNP.6:3271732 chr06:003271732 0 W/3271732-3271732 FN1419-S Single Base Substitution C-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1057-S.SNP.6:3278675 chr06:003278675 0 W/3278675-3278675 FN1057-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2678-S.SNP.6:3280304 chr06:003280304 0 W/3280304-3280304 FN2678-S SNP A -> T AC=1;AN=200;BQB=0.99584;DP=4914;DP4=2309,2393,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.60273e-08;MQSB=0.900504;RPB=0.527538;SGB=3.06925;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.6:3280889 chr06:003280889 0 W/3280889-3280889 FN1037-S Single Base Substitution G-A INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1424-S.SNP.6:3286456 chr06:003286456 0 W/3286456-3286456 FN1424-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1424-S.SNP.6:3286457 chr06:003286457 0 W/3286457-3286457 FN1424-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1182-S.SNP.6:3292372 chr06:003292372 0 W/3292372-3292372 FN1182-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1467-S.SNP.6:3292372 chr06:003292372 0 W/3292372-3292372 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2599-S.SNP.6:3292372 chr06:003292372 0 W/3292372-3292372 FN2599-S SNP G -> A AC=2;AN=198;BQB=0.785944;DP=3764;DP4=1595,1914,30,21;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.000265675;MQB=2.8654e-18;MQSB=0.996285;RPB=0.994899;SGB=117.578;VDB=0.262963;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.6:3292372 chr06:003292372 0 W/3292372-3292372 FN558-S Single Base Substitution G-A INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN869-S.SNP.6:3292372 chr06:003292372 0 W/3292372-3292372 FN869-S Single Base Substitution G-A INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2495.SNP.6:3295892 chr06:003295892 0 W/3295892-3295892 FN2495 SNP T -> A AC=2;AN=200;BQB=0.930368;DP=4254;DP4=1737,2002,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90206e-19;MQSB=0.998565;RPB=0.37012;SGB=68.5625;VDB=0.453018;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K121M|657|LOC_Os06g06940|protein_coding|CODING|LOC_Os06g06940.1|1|1) FN1493-S.SNP.6:3307150 chr06:003307150 0 W/3307150-3307150 FN1493-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3670-S.SNP.6:3324890 chr06:003324890 0 W/3324890-3324890 FN3670-S SNP A -> G AC=1;AN=190;BQB=0.998967;DP=2926;DP4=1378,1453,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.70889e-08;MQSB=0.990211;RPB=0.990955;SGB=49.0954;VDB=0.753381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T333A|781|LOC_Os06g07010|protein_coding|CODING|LOC_Os06g07010.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T333A|780|LOC_Os06g07010|protein_coding|CODING|LOC_Os06g07010.2|2|1) FN1265-S.SNP.6:3324974 chr06:003324974 0 W/3324974-3324974 FN1265-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g07010 transposon protein, putative, unclassified, expressed SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1513-S.SNP.6:3335126 chr06:003335126 0 W/3335126-3335126 FN1513-S Single Base Substitution C-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1648-S.SNP.6:3335954 chr06:003335954 0 W/3335954-3335954 FN1648-S Single Base Substitution G-A INTERGENIC HET SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN2753-S.SNP.6:3336626 chr06:003336626 0 W/3336626-3336626 FN2753-S SNP G -> A AC=2;AN=200;BQB=0.745312;DP=4770;DP4=2180,2144,18,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.58641e-21;MQSB=0.311493;RPB=0.121035;SGB=119.583;VDB=0.611151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.6:3343837 chr06:003343837 0 W/3343837-3343837 FN1265-S Single Base Substitution A-T INTRON HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1704-S.SNP.6:3347030 chr06:003347030 0 W/3347030-3347030 FN1704-S SNP C -> T AC=1;AN=188;BQB=0.20196;DP=3022;DP4=1762,1235,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0430179;MQB=0.920239;MQSB=8.62129e-09;RPB=0.0548296;SGB=5.5382;VDB=0.0276731;EFF=INTERGENIC(MODIFIER||||||||||1) W596-1-1.SNP.6:3351174 chr06:003351174 0 W/3351174-3351174 W596-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN1405-S.SNP.6:3351195 chr06:003351195 0 W/3351195-3351195 FN1405-S Single Base Substitution T-C INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1514-S.SNP.6:3361757 chr06:003361757 0 W/3361757-3361757 FN1514-S Single Base Substitution C-T INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN780-S.SNP.6:3373274 chr06:003373274 0 W/3373274-3373274 FN780-S Single Base Substitution G-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3707-S.SNP.6:3374463 chr06:003374463 0 W/3374463-3374463 FN3707-S SNP C -> A AC=1;AN=190;BQB=0.933782;DP=2605;DP4=1381,1092,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08892e-08;MQSB=0.783734;RPB=0.945766;SGB=53.6492;VDB=0.616822;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.6:3375012 chr06:003375012 0 W/3375012-3375012 FN1281-S Single Base Substitution C-T INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2281.SNP.6:3379914 chr06:003379914 0 W/3379914-3379914 FN2281 SNP C -> G AC=1;AN=192;BQB=0.991739;DP=4751;DP4=2403,2152,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.43355e-12;MQSB=0.915268;RPB=0.862372;SGB=39.1713;VDB=0.0343468;EFF=INTRON(MODIFIER||||870|LOC_Os06g07090|protein_coding|CODING|LOC_Os06g07090.1|6|1),INTRON(MODIFIER||||870|LOC_Os06g07090|protein_coding|CODING|LOC_Os06g07090.2|6|1) FN1082-S.SNP.6:3385785 chr06:003385785 0 W/3385785-3385785 FN1082-S Single Base Substitution A-T INTRON HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN2426.SNP.6:3386347 chr06:003386347 0 W/3386347-3386347 FN2426 SNP G -> T AC=1;AN=200;BQB=0.855775;DP=4870;DP4=2256,2372,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47182e-08;MQSB=0.999519;RPB=0.918048;SGB=19.0642;VDB=0.711693;EFF=UTR_3_PRIME(MODIFIER||227||870|LOC_Os06g07090|protein_coding|CODING|LOC_Os06g07090.1|19|1),INTRON(MODIFIER||||870|LOC_Os06g07090|protein_coding|CODING|LOC_Os06g07090.2|19|1) FN2401.SNP.6:3400919 chr06:003400919 0 W/3400919-3400919 FN2401 SNP A -> G AC=1;AN=200;BQB=0.746597;DP=3563;DP4=2122,923,10,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000561325;MQB=0.000769941;MQSB=1.46451e-26;RPB=0.761946;SGB=63.4749;VDB=0.702026;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C34|1270|LOC_Os06g07110|protein_coding|CODING|LOC_Os06g07110.1|1|1) FN2124-S.SNP.6:3404481 chr06:003404481 0 W/3404481-3404481 FN2124-S SNP A -> G AC=2;AN=168;BQB=0.17752;DP=3246;DP4=1440,1740,22,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.71129e-23;MQSB=0.969444;RPB=0.906417;SGB=-54.8729;VDB=0.643098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.6:3412590 chr06:003412590 0 W/3412590-3412590 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.91271;DP=3042;DP4=1421,1474,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.94476e-13;MQSB=0.982247;RPB=0.986098;SGB=67.4439;VDB=0.248359;EFF=INTRON(MODIFIER||||680|LOC_Os06g07130|protein_coding|CODING|LOC_Os06g07130.1|7|1) FN2401.SNP.6:3418579 chr06:003418579 0 W/3418579-3418579 FN2401 SNP T -> G AC=1;AN=200;BQB=4.73266e-12;DP=5181;DP4=2481,2452,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.62213e-10;MQSB=0.673073;RPB=0.841108;SGB=39.9056;VDB=0.119903;EFF=UTR_3_PRIME(MODIFIER||347||680|LOC_Os06g07130|protein_coding|CODING|LOC_Os06g07130.1|17|1) FN2401.SNP.6:3418581 chr06:003418581 0 W/3418581-3418581 FN2401 SNP G -> T AC=1;AN=200;BQB=4.99198e-10;DP=5180;DP4=2472,2425,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.99306e-11;MQSB=0.590532;RPB=0.999188;SGB=-10.0844;VDB=0.134099;EFF=UTR_3_PRIME(MODIFIER||349||680|LOC_Os06g07130|protein_coding|CODING|LOC_Os06g07130.1|17|1) FN276-S.SNP.6:3419113 chr06:003419113 0 W/3419113-3419113 FN276-S Single Base Substitution C-T INTERGENIC HOMO SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1318-S.SNP.6:3440989 chr06:003440989 0 W/3440989-3440989 FN1318-S Single Base Substitution C-T INTRON HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN765-S.SNP.6:3444421 chr06:003444421 0 W/3444421-3444421 FN765-S Single Base Substitution A-G INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN408-S.SNP.6:3446290 chr06:003446290 0 W/3446290-3446290 FN408-S Single Base Substitution T-C INTRON HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1412-S.SNP.6:3454478 chr06:003454478 0 W/3454478-3454478 FN1412-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-37.SNP.6:3457562 chr06:003457562 0 W/3457562-3457562 FN-37 Single Base Substitution T-A INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1113-S.SNP.6:3457816 chr06:003457816 0 W/3457816-3457816 FN1113-S Single Base Substitution A-C INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN865-S.SNP.6:3466060 chr06:003466060 0 W/3466060-3466060 FN865-S Single Base Substitution C-T INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN3579-S.SNP.6:3467729 chr06:003467729 0 W/3467729-3467729 FN3579-S SNP T -> A AC=1;AN=188;BQB=0.451887;DP=3166;DP4=1815,1129,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=7.64436e-07;MQSB=0.0866438;RPB=0.441332;SGB=11.7114;VDB=0.999928;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.6:3475228 chr06:003475228 0 W/3475228-3475228 FN-233 Single Base Substitution A-T INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN-281.SNP.6:3481468 chr06:003481468 0 W/3481468-3481468 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3455-S.SNP.6:3485274 chr06:003485274 0 W/3485274-3485274 FN3455-S SNP A -> G AC=1;AN=184;BQB=0.991693;DP=3494;DP4=1947,1381,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.88841e-09;MQSB=0.0312203;RPB=0.258343;SGB=56.8786;VDB=0.507368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.6:3488565 chr06:003488565 0 W/3488565-3488565 FN2595-S SNP C -> A,T AC=2,1;AN=198;BQB=0.0268147;DP=3197;DP4=961,1616,41,36;HOB=0.00964187;ICB=1;MQ=47;MQ0F=0.000312793;MQB=1.51789e-25;MQSB=4.76092e-08;RPB=7.22477e-11;SGB=-1055.89;VDB=4.37927e-12;EFF=INTERGENIC(MODIFIER||||||||||1),INTERGENIC(MODIFIER||||||||||2) FN1749-S.SNP.6:3488633 chr06:003488633 0 W/3488633-3488633 FN1749-S SNP T -> C AC=2;AN=188;BQB=0.0124596;DP=1910;DP4=846,849,10,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00052356;MQB=0.00325457;MQSB=0.392999;RPB=0.554385;SGB=-160.054;VDB=0.580132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.6:3490407 chr06:003490407 0 W/3490407-3490407 FN2172-S SNP A -> G AC=1;AN=168;BQB=0.00779776;DP=3049;DP4=1556,1453,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.30668e-07;MQSB=0.735638;RPB=0.682629;SGB=-15.3725;VDB=0.593371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K46R|107|LOC_Os06g07280|protein_coding|CODING|LOC_Os06g07280.1|2|1) FN969-S.SNP.6:3494487 chr06:003494487 0 W/3494487-3494487 FN969-S Single Base Substitution A-G INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN-313.SNP.6:3497700 chr06:003497700 0 W/3497700-3497700 FN-313 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g07290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN3287-S.SNP.6:3498811 chr06:003498811 0 W/3498811-3498811 FN3287-S SNP G -> T AC=1;AN=184;BQB=0.970195;DP=3236;DP4=1547,1604,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0321384;MQB=0.994217;MQSB=0;RPB=0.535137;SGB=89.4385;VDB=0.273302;EFF=SPLICE_SITE_DONOR(HIGH||||1696|LOC_Os06g07290|protein_coding|CODING|LOC_Os06g07290.1|2|1),INTRON(MODIFIER||||1696|LOC_Os06g07290|protein_coding|CODING|LOC_Os06g07290.1|2|1);LOF=(LOC_Os06g07290|LOC_Os06g07290|1|1.00) FN3665-S.SNP.6:3498837 chr06:003498837 0 W/3498837-3498837 FN3665-S SNP G -> A AC=2;AN=190;BQB=0.913077;DP=2874;DP4=1400,1326,32,25;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0974252;MQB=0.997614;MQSB=0;RPB=0.482949;SGB=248.477;VDB=0.0120876;EFF=INTRON(MODIFIER||||1696|LOC_Os06g07290|protein_coding|CODING|LOC_Os06g07290.1|2|1) FN-390.SNP.6:3506415 chr06:003506415 0 W/3506415-3506415 FN-390 Single Base Substitution A-T INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN2083-S.SNP.6:3508989 chr06:003508989 0 W/3508989-3508989 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.991415;DP=2942;DP4=1182,1734,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54023e-09;MQSB=0.952234;RPB=0.828974;SGB=29.4772;VDB=0.0142454;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.6:3538809 chr06:003538809 0 W/3538809-3538809 FN1286-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g07350 RNA-binding motif protein, putative, expressed SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1286-S.SNP.6:3538812 chr06:003538812 0 W/3538812-3538812 FN1286-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g07350 RNA-binding motif protein, putative, expressed SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN4063-S.SNP.6:3548386 chr06:003548386 0 W/3548386-3548386 FN4063-S SNP C -> T AC=2;AN=168;BQB=0.999579;DP=2702;DP4=1303,1292,17,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000370096;MQB=2.88732e-10;MQSB=0.293314;RPB=0.491855;SGB=114.204;VDB=0.0724106;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V71I|485|LOC_Os06g07380|protein_coding|CODING|LOC_Os06g07380.1|1|1) FN907-S.SNP.6:3551374 chr06:003551374 0 W/3551374-3551374 FN907-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g07390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1113-S.SNP.6:3552740 chr06:003552740 0 W/3552740-3552740 FN1113-S Single Base Substitution T-C INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN4184-S.SNP.6:3561983 chr06:003561983 0 W/3561983-3561983 FN4184-S SNP T -> C AC=1;AN=170;BQB=0.762589;DP=2589;DP4=1025,1435,2,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.77794e-07;MQSB=0.919558;RPB=0.99104;SGB=52.3148;VDB=0.141222;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.6:3562094 chr06:003562094 0 W/3562094-3562094 FN864-S Single Base Substitution A-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2185-S.SNP.6:3568816 chr06:003568816 0 W/3568816-3568816 FN2185-S SNP T -> A AC=2;AN=190;BQB=0.997918;DP=4716;DP4=2371,2013,28,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.69785e-24;MQSB=0.973647;RPB=0.206823;SGB=171.148;VDB=0.121862;EFF=INTRON(MODIFIER||||874|LOC_Os06g07420|protein_coding|CODING|LOC_Os06g07420.1|2|1) FN1423-S.SNP.6:3572932 chr06:003572932 0 W/3572932-3572932 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2210-S.SNP.6:3574393 chr06:003574393 0 W/3574393-3574393 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.28577;DP=3355;DP4=1516,1448,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0193741;MQB=0.000367269;MQSB=0.00408361;RPB=0.909387;SGB=25.439;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.6:3579756 chr06:003579756 0 W/3579756-3579756 FN3595-S SNP C -> T AC=1;AN=190;BQB=0.240567;DP=3157;DP4=1266,1618,52,63;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0199557;MQB=0;MQSB=1.57155e-08;RPB=2.60529e-29;SGB=-1534.24;VDB=1.39895e-30;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.6:3585449 chr06:003585449 0 W/3585449-3585449 FN4087-S SNP T -> C AC=1;AN=182;BQB=0.980564;DP=3565;DP4=1717,1702,13,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.21921e-12;MQSB=0.981682;RPB=0.710563;SGB=63.7146;VDB=0.830962;EFF=UTR_5_PRIME(MODIFIER||302||253|LOC_Os06g07470|protein_coding|CODING|LOC_Os06g07470.1|1|1) FN3910-S.SNP.6:3593879 chr06:003593879 0 W/3593879-3593879 FN3910-S SNP C -> A AC=1;AN=158;BQB=0.141001;DP=2773;DP4=1378,1289,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.0011609;MQSB=0.991846;RPB=0.937154;SGB=38.3284;VDB=0.419414;EFF=INTRON(MODIFIER||||330|LOC_Os06g07474|protein_coding|CODING|LOC_Os06g07474.2|4|1),INTRON(MODIFIER||||344|LOC_Os06g07474|protein_coding|CODING|LOC_Os06g07474.1|4|1) FN2412.SNP.6:3595079 chr06:003595079 0 W/3595079-3595079 FN2412 SNP T -> C AC=1;AN=200;BQB=0.788951;DP=4585;DP4=1924,2252,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218103;MQB=1.76492e-12;MQSB=0.986726;RPB=0.909822;SGB=-6.45336;VDB=0.548935;EFF=INTRON(MODIFIER||||344|LOC_Os06g07474|protein_coding|CODING|LOC_Os06g07474.1|1|1),INTRON(MODIFIER||||330|LOC_Os06g07474|protein_coding|CODING|LOC_Os06g07474.2|1|1) FN1639-S.SNP.6:3604833 chr06:003604833 0 W/3604833-3604833 FN1639-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os06g07490 HIRAN domain containing protein, putative, expressed SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN625-S.SNP.6:3606836 chr06:003606836 0 W/3606836-3606836 FN625-S Single Base Substitution C-T INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2139-S.SNP.6:3608728 chr06:003608728 0 W/3608728-3608728 FN2139-S SNP T -> C AC=2;AN=168;BQB=0.138093;DP=1765;DP4=784,919,13,10;HOB=0.0235261;ICB=0.494119;MQ=33;MQ0F=0.0832861;MQB=0.992363;MQSB=3.17124e-12;RPB=0.704674;SGB=-40.6433;VDB=0.659869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V94A|1073|LOC_Os06g07500|protein_coding|CODING|LOC_Os06g07500.1|1|1) 707-5.SNP.6:3628855 chr06:003628855 0 W/3628855-3628855 707-5 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os06g07530 retrotransposon protein, putative, unclassified, expressed SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. FN2596-S.SNP.6:3629968 chr06:003629968 0 W/3629968-3629968 FN2596-S SNP G -> A AC=1;AN=188;BQB=0.589797;DP=3353;DP4=1580,1587,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0014912;MQB=0.000337467;MQSB=0.693997;RPB=0.807013;SGB=25.7687;VDB=0.546508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T77M|1785|LOC_Os06g07530|protein_coding|CODING|LOC_Os06g07530.1|1|1) FN3707-S.SNP.6:3636420 chr06:003636420 0 W/3636420-3636420 FN3707-S SNP A -> G AC=1;AN=190;BQB=0.994057;DP=3003;DP4=1570,1280,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.04379e-08;MQSB=0.986385;RPB=0.796595;SGB=39.6545;VDB=0.752013;EFF=INTRON(MODIFIER||||457|LOC_Os06g07540|protein_coding|CODING|LOC_Os06g07540.1|8|1),INTRON(MODIFIER||||457|LOC_Os06g07540|protein_coding|CODING|LOC_Os06g07540.2|7|1),INTRON(MODIFIER||||346|LOC_Os06g07540|protein_coding|CODING|LOC_Os06g07540.3|6|1) FN1299-S.SNP.6:3639442 chr06:003639442 0 W/3639442-3639442 FN1299-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1299-S.SNP.6:3639443 chr06:003639443 0 W/3639443-3639443 FN1299-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN-305.SNP.6:3644793 chr06:003644793 0 W/3644793-3644793 FN-305 Single Base Substitution T-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1667-S.SNP.6:3645997 chr06:003645997 0 W/3645997-3645997 FN1667-S SNP A -> G AC=2;AN=188;BQB=0.191805;DP=3630;DP4=1935,1626,24,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.18342e-22;MQSB=0.838186;RPB=0.986245;SGB=2.38567;VDB=0.393717;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.6:3649030 chr06:003649030 0 W/3649030-3649030 FN835-S Single Base Substitution T-C INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-160.SNP.6:3651661 chr06:003651661 0 W/3651661-3651661 FN-160 Single Base Substitution T-A INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2090-S.SNP.6:3652652 chr06:003652652 0 W/3652652-3652652 FN2090-S SNP G -> A AC=1;AN=168;BQB=0.994727;DP=3138;DP4=1471,1611,14,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.10006e-15;MQSB=0.997074;RPB=0.336743;SGB=-46.9043;VDB=0.360162;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.6:3656117 chr06:003656117 0 W/3656117-3656117 W385-6-8-4 Single Base Substitution C-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1722-S.SNP.6:3661683 chr06:003661683 0 W/3661683-3661683 FN1722-S SNP C -> A AC=1;AN=188;BQB=0.0154108;DP=3365;DP4=2173,1148,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.16183e-07;MQSB=0.563931;RPB=0.297872;SGB=-64.8159;VDB=0.496307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.6:3664775 chr06:003664775 0 W/3664775-3664775 FN3376-S SNP T -> A AC=1;AN=184;BQB=0.880474;DP=3264;DP4=1518,1578,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05973e-13;MQSB=0.9902;RPB=0.50968;SGB=93.9603;VDB=0.82429;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.6:3670457 chr06:003670457 0 W/3670457-3670457 FN-249 Single Base Substitution G-C INTERGENIC HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1528-S.SNP.6:3671739 chr06:003671739 0 W/3671739-3671739 FN1528-S Single Base Substitution C-T INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1380-S.SNP.6:3689469 chr06:003689469 0 W/3689469-3689469 FN1380-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3900-S.SNP.6:3690195 chr06:003690195 0 W/3690195-3690195 FN3900-S SNP C -> T AC=2;AN=158;BQB=0.977145;DP=2422;DP4=1116,1172,13,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.92786e-16;MQSB=0.469277;RPB=0.360413;SGB=49.8826;VDB=0.186717;EFF=INTRON(MODIFIER||||429|LOC_Os06g07630|protein_coding|CODING|LOC_Os06g07630.1|2|1) FN1467-S.SNP.6:3692102 chr06:003692102 0 W/3692102-3692102 FN1467-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g07630 26S protease regulatory subunit 6A, putative, expressed SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN780-S.SNP.6:3699470 chr06:003699470 0 W/3699470-3699470 FN780-S Single Base Substitution T-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3772-S.SNP.6:3702362 chr06:003702362 0 W/3702362-3702362 FN3772-S SNP T -> G AC=2;AN=190;BQB=0.91677;DP=3049;DP4=1778,1125,23,13;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.104624;MQB=0.814032;MQSB=0;RPB=0.576718;SGB=77.2911;VDB=0.892547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M327L|394|LOC_Os06g07650|protein_coding|CODING|LOC_Os06g07650.1|2|1) FN3788-S.SNP.6:3715640 chr06:003715640 0 W/3715640-3715640 FN3788-S SNP G -> A AC=2;AN=190;BQB=0.871886;DP=2774;DP4=1417,1267,6,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.21351e-08;MQSB=0.8626;RPB=0.989657;SGB=43.2083;VDB=0.667242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.6:3716104 chr06:003716104 0 W/3716104-3716104 FN1668-S SNP T -> A AC=2;AN=188;BQB=0.584711;DP=3086;DP4=1230,1798,17,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.53467e-17;MQSB=0.958163;RPB=0.86625;SGB=84.5719;VDB=0.11635;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.6:3717452 chr06:003717452 0 W/3717452-3717452 FN-92 Single Base Substitution G-A INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1481-S.SNP.6:3717452 chr06:003717452 0 W/3717452-3717452 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3514-S.SNP.6:3717452 chr06:003717452 0 W/3717452-3717452 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.928247;DP=2428;DP4=1309,1030,11,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.42144e-11;MQSB=0.689839;RPB=0.916521;SGB=98.9552;VDB=0.266915;EFF=INTERGENIC(MODIFIER||||||||||1) FN709-S.SNP.6:3717452 chr06:003717452 0 W/3717452-3717452 FN709-S Single Base Substitution G-A INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN934-S.SNP.6:3717452 chr06:003717452 0 W/3717452-3717452 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1525-S.SNP.6:3719328 chr06:003719328 0 W/3719328-3719328 FN1525-S Single Base Substitution C-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN983-S.SNP.6:3720664 chr06:003720664 0 W/3720664-3720664 FN983-S Single Base Substitution G-A INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3339-S.SNP.6:3721829 chr06:003721829 0 W/3721829-3721829 FN3339-S SNP G -> T AC=2;AN=184;BQB=0.893788;DP=2891;DP4=1341,1458,6,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.76151e-11;MQSB=0.967925;RPB=0.240971;SGB=80.3949;VDB=0.136845;EFF=INTRON(MODIFIER||||120|LOC_Os06g07690|protein_coding|CODING|LOC_Os06g07690.1|1|1) FN2267-S.SNP.6:3724580 chr06:003724580 0 W/3724580-3724580 FN2267-S SNP T -> C AC=1;AN=190;BQB=0.911166;DP=2404;DP4=744,1157,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00124792;MQB=0.00788595;MQSB=3.97285e-06;RPB=0.834779;SGB=8.33661;VDB=0.478362;EFF=INTRON(MODIFIER||||298|LOC_Os06g07700|protein_coding|CODING|LOC_Os06g07700.1|1|1) FN2691-S.SNP.6:3727378 chr06:003727378 0 W/3727378-3727378 FN2691-S SNP T -> G AC=1;AN=200;BQB=0.787841;DP=4861;DP4=2159,2532,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.50599e-08;MQSB=0.9877;RPB=0.992686;SGB=26.8797;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.6:3731152 chr06:003731152 0 W/3731152-3731152 FN4096-S SNP A -> T AC=1;AN=182;BQB=0.94983;DP=2502;DP4=1272,1170,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.78227e-07;MQSB=0.987518;RPB=0.966591;SGB=28.6061;VDB=0.0715497;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.6:3732465 chr06:003732465 0 W/3732465-3732465 FN2292 SNP G -> A AC=1;AN=192;BQB=0.0501361;DP=4909;DP4=2372,2278,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00325932;MQB=0.0122896;MQSB=0.239669;RPB=0.872592;SGB=-10.2539;VDB=0.669283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.6:3734305 chr06:003734305 0 W/3734305-3734305 FN2333 SNP C -> T AC=1;AN=192;BQB=0.968569;DP=4733;DP4=2248,2140,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.00897e-09;MQSB=0.519669;RPB=0.846962;SGB=26.3496;VDB=0.318781;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V210|717|LOC_Os06g07710|protein_coding|CODING|LOC_Os06g07710.1|3|1) FN1042-S.SNP.6:3735538 chr06:003735538 0 W/3735538-3735538 FN1042-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN-278.SNP.6:3737863 chr06:003737863 0 W/3737863-3737863 FN-278 Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN1042-S.SNP.6:3738806 chr06:003738806 0 W/3738806-3738806 FN1042-S Single Base Substitution T-A INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN4201-S.SNP.6:3743835 chr06:003743835 0 W/3743835-3743835 FN4201-S SNP T -> A AC=1;AN=170;BQB=0.136308;DP=2484;DP4=1132,1293,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00241546;MQB=0.000530448;MQSB=0.644586;RPB=0.426377;SGB=38.987;VDB=0.245704;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.6:3743842 chr06:003743842 0 W/3743842-3743842 FN-228 Single Base Substitution A-G INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN3540-S.SNP.6:3751694 chr06:003751694 0 W/3751694-3751694 FN3540-S SNP T -> A AC=1;AN=188;BQB=0.969223;DP=2890;DP4=1347,1424,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.00677e-10;MQSB=0.997095;RPB=0.999986;SGB=46.6141;VDB=0.578992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.6:3751695 chr06:003751695 0 W/3751695-3751695 FN3540-S SNP G -> A AC=1;AN=188;BQB=0.976687;DP=2898;DP4=1366,1455,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.02084e-10;MQSB=0.980888;RPB=0.967071;SGB=43.0708;VDB=0.599011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-372.SNP.6:3766567 chr06:003766567 0 W/3766567-3766567 FN-372 Single Base Substitution T-G INTRON HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-370.SNP.6:3767443 chr06:003767443 0 W/3767443-3767443 FN-370 Single Base Substitution G-A INTRON HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2557-S.SNP.6:3778433 chr06:003778433 0 W/3778433-3778433 FN2557-S SNP G -> C AC=2;AN=198;BQB=0.882536;DP=3831;DP4=1894,1698,14,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.11589e-17;MQSB=0.907495;RPB=0.853005;SGB=90.4807;VDB=0.49323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.6:3785560 chr06:003785560 0 W/3785560-3785560 FN1540-S Single Base Substitution G-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1540-S.SNP.6:3785561 chr06:003785561 0 W/3785561-3785561 FN1540-S Single Base Substitution C-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2095-S.SNP.6:3801022 chr06:003801022 0 W/3801022-3801022 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.0461127;DP=3824;DP4=1539,2221,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.80529e-10;MQSB=0.995659;RPB=0.999663;SGB=-323.447;VDB=0.543199;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.6:3801224 chr06:003801224 0 W/3801224-3801224 FN512-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2676-S.SNP.6:3899637 chr06:003899637 0 W/3899637-3899637 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.94237;DP=4947;DP4=2329,2311,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62369e-08;MQSB=0.445903;RPB=0.99269;SGB=24.2746;VDB=0.942531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.6:3902442 chr06:003902442 0 W/3902442-3902442 FN1217-S Single Base Substitution C-T INTRON HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN373-S.SNP.6:3920990 chr06:003920990 0 W/3920990-3920990 FN373-S Single Base Substitution G-A INTRON HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3805-S.SNP.6:3921873 chr06:003921873 0 W/3921873-3921873 FN3805-S SNP T -> C AC=1;AN=190;BQB=0.945127;DP=2508;DP4=1113,1336,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74519e-06;MQSB=0.996755;RPB=0.868722;SGB=35.4339;VDB=0.651954;EFF=INTRON(MODIFIER||||767|LOC_Os06g08080|protein_coding|CODING|LOC_Os06g08080.1|2|1) FN2734-S.SNP.6:3934057 chr06:003934057 0 W/3934057-3934057 FN2734-S SNP A -> C AC=1;AN=200;BQB=0.909576;DP=5168;DP4=2434,2545,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16104e-08;MQSB=0.924056;RPB=0.675529;SGB=43.8747;VDB=0.271244;EFF=UTR_3_PRIME(MODIFIER||313||567|LOC_Os06g08110|protein_coding|CODING|LOC_Os06g08110.1|3|1) FN3714-S.SNP.6:3937446 chr06:003937446 0 W/3937446-3937446 FN3714-S SNP A -> G AC=1;AN=190;BQB=0.869747;DP=2966;DP4=1494,1296,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54757e-06;MQSB=0.790867;RPB=0.562376;SGB=53.6492;VDB=0.157218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.6:3940326 chr06:003940326 0 W/3940326-3940326 FN1337-S Single Base Substitution G-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2281.SNP.6:3948114 chr06:003948114 0 W/3948114-3948114 FN2281 SNP G -> A AC=1;AN=192;BQB=0.805702;DP=4769;DP4=2211,2272,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209688;MQB=3.81174e-14;MQSB=0.889255;RPB=0.501587;SGB=-8.56084;VDB=0.674613;EFF=UTR_3_PRIME(MODIFIER||193||360|LOC_Os06g08140|protein_coding|CODING|LOC_Os06g08140.1|4|1) FN2375.SNP.6:3965471 chr06:003965471 0 W/3965471-3965471 FN2375 SNP C -> A AC=1;AN=192;BQB=0.998791;DP=4961;DP4=2452,2214,17,7;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=5.52685e-08;MQSB=0.437875;RPB=0.947096;SGB=-10.2539;VDB=0.748603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.6:3969859 chr06:003969859 0 W/3969859-3969859 FN3875-S SNP T -> A AC=2;AN=158;BQB=0.967488;DP=2500;DP4=1324,1042,19,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.32823e-16;MQSB=0.350661;RPB=0.96111;SGB=143.195;VDB=0.191398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.6:3982552 chr06:003982552 0 W/3982552-3982552 FN2795-S SNP A -> G AC=1;AN=198;BQB=0.55411;DP=3952;DP4=1860,1899,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.09177e-11;MQSB=0.64528;RPB=0.303305;SGB=12.5396;VDB=0.128059;EFF=UTR_5_PRIME(MODIFIER||66||98|LOC_Os06g08220|protein_coding|CODING|LOC_Os06g08220.1|1|1) FN4180-S.SNP.6:3986435 chr06:003986435 0 W/3986435-3986435 FN4180-S SNP G -> C AC=1;AN=170;BQB=0.99997;DP=1888;DP4=1174,605,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00105932;MQB=0.0242833;MQSB=0.000434108;RPB=0.815245;SGB=21.1076;VDB=0.854392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.6:3987701 chr06:003987701 0 W/3987701-3987701 FN2337 SNP G -> A AC=1;AN=192;BQB=0.436446;DP=4666;DP4=2343,2035,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.61957e-07;MQSB=0.591689;RPB=0.353476;SGB=4.22611;VDB=0.932876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.6:3988818 chr06:003988818 0 W/3988818-3988818 FN1123-S Single Base Substitution C-T INTERGENIC HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN-128.SNP.6:3991822 chr06:003991822 0 W/3991822-3991822 FN-128 Single Base Substitution G-A INTRON HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN-170.SNP.6:3993743 chr06:003993743 0 W/3993743-3993743 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-402.SNP.6:4000703 chr06:004000703 0 W/4000703-4000703 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2725-S.SNP.6:4002638 chr06:004002638 0 W/4002638-4002638 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.901066;DP=5116;DP4=2346,2522,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.7811e-07;MQSB=0.999118;RPB=0.554643;SGB=33.0593;VDB=0.38011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.6:4003030 chr06:004003030 0 W/4003030-4003030 FN3753-S SNP G -> A AC=1;AN=190;BQB=0.992308;DP=3329;DP4=1709,1422,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.6992e-09;MQSB=0.954674;RPB=0.952187;SGB=53.8699;VDB=0.816459;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.6:4003917 chr06:004003917 0 W/4003917-4003917 FN3789-S SNP C -> T AC=1;AN=190;BQB=0.703174;DP=3320;DP4=1653,1516,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44396e-05;MQSB=0.766913;RPB=0.999121;SGB=10.8904;VDB=0.546508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.6:4005220 chr06:004005220 0 W/4005220-4005220 FN2181-S SNP T -> A AC=1;AN=190;BQB=0.854344;DP=5144;DP4=2410,2447,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.45077e-06;MQSB=0.135925;RPB=0.724747;SGB=44.5415;VDB=0.44694;EFF=INTRON(MODIFIER||||97|LOC_Os06g08270|protein_coding|CODING|LOC_Os06g08270.1|1|1) FN4071-S.SNP.6:4011895 chr06:004011895 0 W/4011895-4011895 FN4071-S SNP G -> C AC=1;AN=182;BQB=0.974336;DP=2990;DP4=1527,1394,9,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.36349e-11;MQSB=0.999084;RPB=0.98473;SGB=80.1982;VDB=0.767797;EFF=INTRON(MODIFIER||||1273|LOC_Os06g08280|protein_coding|CODING|LOC_Os06g08280.1|4|1) FN2706-S.SNP.6:4015493 chr06:004015493 0 W/4015493-4015493 FN2706-S SNP A -> T AC=2;AN=200;BQB=0.907995;DP=4845;DP4=2308,2325,22,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.50801e-26;MQSB=0.974111;RPB=0.486506;SGB=155.635;VDB=0.431846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.6:4018278 chr06:004018278 0 W/4018278-4018278 FN1586-S Single Base Substitution C-T INTRON HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2579-S.SNP.6:4022390 chr06:004022390 0 W/4022390-4022390 FN2579-S SNP C -> T AC=1;AN=198;BQB=0.31643;DP=3920;DP4=1728,2029,10,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000255102;MQB=2.21716e-16;MQSB=0.941587;RPB=0.999227;SGB=90.4807;VDB=0.336445;EFF=UTR_3_PRIME(MODIFIER||264||445|LOC_Os06g08300|protein_coding|CODING|LOC_Os06g08300.2|8|1) FN2609-S.SNP.6:4023644 chr06:004023644 0 W/4023644-4023644 FN2609-S SNP A -> T AC=2;AN=198;BQB=0.931857;DP=1225;DP4=24,1135,0,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.12389e-13;MQSB=0.857776;RPB=0.0557148;SGB=113.613;VDB=0.000645483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1742-S.SNP.6:4027149 chr06:004027149 0 W/4027149-4027149 FN1742-S SNP C -> T AC=1;AN=188;BQB=0.23601;DP=3407;DP4=1443,1931,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10082e-06;MQSB=0.932743;RPB=0.80178;SGB=-57.5324;VDB=0.910077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.6:4031737 chr06:004031737 0 W/4031737-4031737 FN1224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN944-S.SNP.6:4031901 chr06:004031901 0 W/4031901-4031901 FN944-S Single Base Substitution A-G INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN472-S.SNP.6:4043616 chr06:004043616 0 W/4043616-4043616 FN472-S Single Base Substitution C-T INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2542-S.SNP.6:4045190 chr06:004045190 0 W/4045190-4045190 FN2542-S SNP C -> G AC=1;AN=198;BQB=0.652745;DP=3331;DP4=1493,1636,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00060042;MQB=1.21066e-06;MQSB=0.00267353;RPB=0.780762;SGB=24.1541;VDB=0.08445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.6:4047616 chr06:004047616 0 W/4047616-4047616 FN3494-S SNP T -> A AC=2;AN=184;BQB=0.203222;DP=2489;DP4=1339,1085,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.99693e-11;MQSB=0.936541;RPB=0.581584;SGB=112.047;VDB=0.596235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.6:4047908 chr06:004047908 0 W/4047908-4047908 FN-146 Single Base Substitution A-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2666-S.SNP.6:4048626 chr06:004048626 0 W/4048626-4048626 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.948151;DP=4844;DP4=2514,2049,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.46626e-14;MQSB=0.998599;RPB=0.611799;SGB=76.3213;VDB=0.862326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.6:4050324 chr06:004050324 0 W/4050324-4050324 FN2211-S SNP T -> A AC=2;AN=190;BQB=0.918773;DP=4821;DP4=2638,1916,24,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93335e-26;MQSB=0.813936;RPB=0.268845;SGB=1.7327;VDB=0.241184;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.6:4056883 chr06:004056883 0 W/4056883-4056883 FN956-S Single Base Substitution G-C INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN337-S.SNP.6:4058935 chr06:004058935 0 W/4058935-4058935 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN1680-S.SNP.6:4064207 chr06:004064207 0 W/4064207-4064207 FN1680-S SNP G -> A AC=2;AN=188;BQB=0.690033;DP=3465;DP4=1531,1869,25,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.8907e-19;MQSB=0.909626;RPB=0.53978;SGB=44.1206;VDB=0.606367;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.6:4066750 chr06:004066750 0 W/4066750-4066750 FN3897-S SNP T -> C AC=1;AN=158;BQB=0.968042;DP=2394;DP4=1144,1174,14,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.52062e-15;MQSB=0.988738;RPB=0.524714;SGB=99.5005;VDB=0.582894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.6:4080333 chr06:004080333 0 W/4080333-4080333 FN2600-S SNP T -> C AC=1;AN=198;BQB=0.933351;DP=4061;DP4=1942,1923,20,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.49992e-18;MQSB=0.908282;RPB=0.997649;SGB=155.237;VDB=0.632929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q353R|1919|LOC_Os06g08380|protein_coding|CODING|LOC_Os06g08380.1|9|1) FN1330-S.SNP.6:4082097 chr06:004082097 0 W/4082097-4082097 FN1330-S Single Base Substitution T-A INTRON HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3516-S.SNP.6:4082097 chr06:004082097 0 W/4082097-4082097 FN3516-S SNP T -> A AC=1;AN=188;BQB=0.618088;DP=2581;DP4=990,1047,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.0012935;MQSB=0.41056;RPB=0.995247;SGB=-3.72151;VDB=0.568714;EFF=INTRON(MODIFIER||||1919|LOC_Os06g08380|protein_coding|CODING|LOC_Os06g08380.1|2|1) FN-182.SNP.6:4091682 chr06:004091682 0 W/4091682-4091682 FN-182 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3826-S.SNP.6:4091682 chr06:004091682 0 W/4091682-4091682 FN3826-S SNP T -> C AC=2;AN=190;BQB=0.99459;DP=2511;DP4=1283,1134,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.58551e-12;MQSB=0.932271;RPB=0.942265;SGB=94.6341;VDB=0.085828;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I233|325|LOC_Os06g08390|protein_coding|CODING|LOC_Os06g08390.1|9|1) CW-631-3-1.SNP.6:4099960 chr06:004099960 0 W/4099960-4099960 CW-631-3-1 Single Base Substitution T-C INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN865-S.SNP.6:4101903 chr06:004101903 0 W/4101903-4101903 FN865-S Single Base Substitution A-G INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN3541-S.SNP.6:4104309 chr06:004104309 0 W/4104309-4104309 FN3541-S SNP T -> A AC=1;AN=188;BQB=0.902939;DP=3046;DP4=1306,1650,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.18669e-07;MQSB=0.539604;RPB=0.889103;SGB=44.4357;VDB=0.652385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.6:4105499 chr06:004105499 0 W/4105499-4105499 FN2662-S SNP A -> G AC=1;AN=200;BQB=0.441464;DP=4880;DP4=2199,2414,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.61189e-11;MQSB=0.984042;RPB=0.849064;SGB=72.6852;VDB=0.556241;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.6:4106252 chr06:004106252 0 W/4106252-4106252 FN4069-S SNP C -> A AC=2;AN=182;BQB=0.801101;DP=961;DP4=57,863,0,16;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0.0176899;MQB=0.00447882;MQSB=2.6627e-05;RPB=0.562251;SGB=63.3816;VDB=0.371298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.6:4106902 chr06:004106902 0 W/4106902-4106902 FN2703-S SNP T -> G AC=1;AN=200;BQB=0.0697066;DP=3993;DP4=1658,2125,10,12;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.237415;MQB=0.969911;MQSB=0;RPB=0.655444;SGB=15.9106;VDB=0.640955;EFF=INTRON(MODIFIER||||1054|LOC_Os06g08410|protein_coding|CODING|LOC_Os06g08410.1|7|1) FN3520-S.SNP.6:4108668 chr06:004108668 0 W/4108668-4108668 FN3520-S SNP G -> T AC=2;AN=188;BQB=0.319035;DP=2773;DP4=1144,1567,10,11;HOB=0.0210502;ICB=0.494738;MQ=20;MQ0F=0.204472;MQB=0.826988;MQSB=2.72066e-07;RPB=0.5627;SGB=89.8686;VDB=0.604609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P558T|1054|LOC_Os06g08410|protein_coding|CODING|LOC_Os06g08410.1|3|1) FN3520-S.SNP.6:4108669 chr06:004108669 0 W/4108669-4108669 FN3520-S SNP A -> T AC=2;AN=188;BQB=0.984695;DP=2774;DP4=1133,1559,9,12;HOB=0.0210502;ICB=0.494738;MQ=20;MQ0F=0.19827;MQB=0.70397;MQSB=5.56944e-07;RPB=0.387452;SGB=89.8686;VDB=0.659657;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A557|1054|LOC_Os06g08410|protein_coding|CODING|LOC_Os06g08410.1|3|1) FN2179-S.SNP.6:4117942 chr06:004117942 0 W/4117942-4117942 FN2179-S SNP G -> T AC=2;AN=168;BQB=0.0717468;DP=2852;DP4=1130,1676,7,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.54788e-07;MQSB=0.82027;RPB=0.989133;SGB=-63.3606;VDB=0.446786;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.6:4122204 chr06:004122204 0 W/4122204-4122204 FN1279-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-377.SNP.6:4122572 chr06:004122572 0 W/4122572-4122572 FN-377 Single Base Substitution T-G INTERGENIC HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN3056-S.SNP.6:4123016 chr06:004123016 0 W/4123016-4123016 FN3056-S SNP G -> C AC=2;AN=184;BQB=0.984452;DP=3496;DP4=1656,1712,22,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.5804e-24;MQSB=0.999564;RPB=0.6774;SGB=151.967;VDB=0.33281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.6:4124147 chr06:004124147 0 W/4124147-4124147 FN3296-S SNP A -> G AC=1;AN=184;BQB=0.506139;DP=2869;DP4=1366,1408,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.21362e-08;MQSB=0.995771;RPB=0.608973;SGB=-15.2358;VDB=0.237081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.6:4125770 chr06:004125770 0 W/4125770-4125770 FN1123-S Single Base Substitution A-T INTERGENIC HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN4202-S.SNP.6:4126068 chr06:004126068 0 W/4126068-4126068 FN4202-S SNP G -> A AC=2;AN=170;BQB=0.822859;DP=2053;DP4=806,1141,17,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20809e-20;MQSB=0.886231;RPB=0.236493;SGB=144.797;VDB=0.12718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.6:4128407 chr06:004128407 0 W/4128407-4128407 FN3538-S SNP G -> T AC=1;AN=188;BQB=0.17671;DP=2889;DP4=1544,1262,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000158351;MQSB=0.997338;RPB=0.947608;SGB=25.3545;VDB=0.668972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.6:4128646 chr06:004128646 0 W/4128646-4128646 FN-377 Single Base Substitution A-C INTERGENIC HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN-377.SNP.6:4128649 chr06:004128649 0 W/4128649-4128649 FN-377 Single Base Substitution G-A INTERGENIC HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN3447-S.SNP.6:4131824 chr06:004131824 0 W/4131824-4131824 FN3447-S SNP A -> G AC=2;AN=184;BQB=0.615464;DP=3222;DP4=1546,1485,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.9924e-15;MQSB=0.975992;RPB=0.52725;SGB=56.0583;VDB=0.854275;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.6:4133509 chr06:004133509 0 W/4133509-4133509 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2477.SNP.6:4134614 chr06:004134614 0 W/4134614-4134614 FN2477 SNP G -> A AC=1;AN=200;BQB=0.220058;DP=4198;DP4=2159,1847,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.6088e-07;MQSB=0.999954;RPB=0.87398;SGB=68.0801;VDB=0.605367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.6:4139822 chr06:004139822 0 W/4139822-4139822 FN2435 SNP A -> G AC=1;AN=200;BQB=0.909774;DP=4948;DP4=2473,2218,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82735e-12;MQSB=0.926735;RPB=0.675949;SGB=65.5058;VDB=0.86757;EFF=INTRON(MODIFIER||||696|LOC_Os06g08440|protein_coding|CODING|LOC_Os06g08440.1|4|1) FN2126-S.SNP.6:4140318 chr06:004140318 0 W/4140318-4140318 FN2126-S SNP A -> G AC=2;AN=168;BQB=0.358533;DP=3636;DP4=2064,1503,22,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.36133e-20;MQSB=0.941968;RPB=0.952664;SGB=44.2536;VDB=0.121947;EFF=INTRON(MODIFIER||||696|LOC_Os06g08440|protein_coding|CODING|LOC_Os06g08440.1|4|1) FN703-S.SNP.6:4147602 chr06:004147602 0 W/4147602-4147602 FN703-S Single Base Substitution A-G INTRON HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN1288-S.SNP.6:4150654 chr06:004150654 0 W/4150654-4150654 FN1288-S Single Base Substitution G-A INTRON HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN3579-S.SNP.6:4151076 chr06:004151076 0 W/4151076-4151076 FN3579-S SNP T -> C AC=1;AN=188;BQB=0.999985;DP=2766;DP4=1174,1488,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.24666e-12;MQSB=0.994414;RPB=0.947933;SGB=57.244;VDB=0.916284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.6:4154261 chr06:004154261 0 W/4154261-4154261 FN1236-S Single Base Substitution A-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2687-S.SNP.6:4154261 chr06:004154261 0 W/4154261-4154261 FN2687-S SNP A -> T AC=1;AN=200;BQB=0.947253;DP=5129;DP4=2336,2576,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22191e-08;MQSB=0.976127;RPB=0.959781;SGB=19.0642;VDB=0.0469937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.6:4157558 chr06:004157558 0 W/4157558-4157558 FN2284 SNP C -> T AC=1;AN=192;BQB=0.997293;DP=4732;DP4=2318,2077,17,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00274725;MQB=4.97869e-09;MQSB=0.0620877;RPB=0.996904;SGB=19.8696;VDB=0.987537;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.6:4158956 chr06:004158956 0 W/4158956-4158956 FN764-S Single Base Substitution T-C INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN3424-S.SNP.6:4161488 chr06:004161488 0 W/4161488-4161488 FN3424-S SNP C -> G AC=1;AN=184;BQB=0.65131;DP=3180;DP4=1537,1526,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38276e-06;MQSB=0.922051;RPB=0.621305;SGB=35.7479;VDB=0.47314;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P51R|486|LOC_Os06g08460|protein_coding|CODING|LOC_Os06g08460.1|1|1) FN1582-S.SNP.6:4163578 chr06:004163578 0 W/4163578-4163578 FN1582-S Single Base Substitution G-A INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3970-S.SNP.6:4169249 chr06:004169249 0 W/4169249-4169249 FN3970-S SNP A -> T AC=1;AN=168;BQB=0.86111;DP=2873;DP4=1290,1444,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.27472e-07;MQSB=0.54746;RPB=0.949592;SGB=61.0344;VDB=0.535209;EFF=INTRON(MODIFIER||||1250|LOC_Os06g08480|protein_coding|CODING|LOC_Os06g08480.1|29|1) FN2230-S.SNP.6:4171163 chr06:004171163 0 W/4171163-4171163 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.919434;DP=5069;DP4=2334,2413,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197278;MQB=6.00819e-13;MQSB=0.906948;RPB=0.0267929;SGB=78.7471;VDB=0.0467483;EFF=INTRON(MODIFIER||||1250|LOC_Os06g08480|protein_coding|CODING|LOC_Os06g08480.1|26|1) FN3957-S.SNP.6:4173327 chr06:004173327 0 W/4173327-4173327 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.661299;DP=2866;DP4=1400,1344,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00732729;MQB=0.231747;MQSB=0.000205654;RPB=0.226426;SGB=45.0404;VDB=0.472913;EFF=INTRON(MODIFIER||||1250|LOC_Os06g08480|protein_coding|CODING|LOC_Os06g08480.1|22|1) FN4173-S.SNP.6:4174155 chr06:004174155 0 W/4174155-4174155 FN4173-S SNP T -> C AC=1;AN=170;BQB=0.925506;DP=2303;DP4=1069,1145,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86961e-10;MQSB=0.753927;RPB=0.0335007;SGB=34.5398;VDB=0.0103124;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D793G|1250|LOC_Os06g08480|protein_coding|CODING|LOC_Os06g08480.1|21|1) FN3366-S.SNP.6:4189526 chr06:004189526 0 W/4189526-4189526 FN3366-S SNP G -> A AC=2;AN=184;BQB=0.819423;DP=2981;DP4=1615,1252,17,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.00094e-19;MQSB=0.999989;RPB=0.803619;SGB=113.227;VDB=0.790517;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H314Y|350|LOC_Os06g08490|protein_coding|CODING|LOC_Os06g08490.1|1|1) FN2311.SNP.6:4191661 chr06:004191661 0 W/4191661-4191661 FN2311 SNP A -> G AC=2;AN=192;BQB=0.0305881;DP=4205;DP4=2182,1523,32,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000237812;MQB=8.60748e-16;MQSB=0.331959;RPB=0.668451;SGB=-322.936;VDB=0.951358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.6:4198673 chr06:004198673 0 W/4198673-4198673 FN1478-S Single Base Substitution G-A INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN462-S.SNP.6:4200339 chr06:004200339 0 W/4200339-4200339 FN462-S Single Base Substitution G-A INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1363-S.SNP.6:4202179 chr06:004202179 0 W/4202179-4202179 FN1363-S Single Base Substitution A-G INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3781-S.SNP.6:4202611 chr06:004202611 0 W/4202611-4202611 FN3781-S SNP G -> A AC=2;AN=190;BQB=0.944804;DP=2950;DP4=1695,1157,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92621e-11;MQSB=0.989049;RPB=0.999738;SGB=71.8647;VDB=0.455669;EFF=SPLICE_SITE_REGION(LOW||||111|LOC_Os06g08510|protein_coding|CODING|LOC_Os06g08510.1|1|1),UTR_5_PRIME(MODIFIER||951||111|LOC_Os06g08510|protein_coding|CODING|LOC_Os06g08510.1|1|1) FN2709-S.SNP.6:4208566 chr06:004208566 0 W/4208566-4208566 FN2709-S SNP T -> G AC=1;AN=200;BQB=0.0625899;DP=4925;DP4=2584,2127,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.08828e-08;MQSB=0.844341;RPB=0.99131;SGB=6.27959;VDB=0.711297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.6:4214318 chr06:004214318 0 W/4214318-4214318 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.706547;DP=4709;DP4=2395,2062,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.78185e-12;MQSB=0.997366;RPB=0.433498;SGB=81.7147;VDB=0.8866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R766Q|940|LOC_Os06g08530|protein_coding|CODING|LOC_Os06g08530.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R741Q|915|LOC_Os06g08530|protein_coding|CODING|LOC_Os06g08530.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R576Q|750|LOC_Os06g08530|protein_coding|CODING|LOC_Os06g08530.3|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R438Q|612|LOC_Os06g08530|protein_coding|CODING|LOC_Os06g08530.4|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R438Q|612|LOC_Os06g08530|protein_coding|CODING|LOC_Os06g08530.5|7|1) FN-173.SNP.6:4219362 chr06:004219362 0 W/4219362-4219362 FN-173 Single Base Substitution G-T INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN895-S.SNP.6:4221148 chr06:004221148 0 W/4221148-4221148 FN895-S Single Base Substitution T-A INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3543-S.SNP.6:4221553 chr06:004221553 0 W/4221553-4221553 FN3543-S SNP C -> G AC=1;AN=188;BQB=0.980659;DP=2614;DP4=1140,1425,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56789e-07;MQSB=0.999304;RPB=0.546243;SGB=28.8977;VDB=0.928149;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.6:4226538 chr06:004226538 0 W/4226538-4226538 FN302-S Single Base Substitution A-G INTRON HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-285.SNP.6:4231545 chr06:004231545 0 W/4231545-4231545 FN-285 Single Base Substitution A-T INTRON HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-285.SNP.6:4231547 chr06:004231547 0 W/4231547-4231547 FN-285 Single Base Substitution C-T INTRON HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1250-S.SNP.6:4233701 chr06:004233701 0 W/4233701-4233701 FN1250-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2296.SNP.6:4234191 chr06:004234191 0 W/4234191-4234191 FN2296 SNP G -> C AC=1;AN=192;BQB=0.94006;DP=4927;DP4=2517,2191,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.000667026;MQSB=0.0735328;RPB=0.519644;SGB=28.9139;VDB=0.000932892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.6:4235428 chr06:004235428 0 W/4235428-4235428 FN3566-S SNP C -> G AC=1;AN=188;BQB=0.977735;DP=3166;DP4=1373,1710,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=2.57929e-08;MQSB=0.690213;RPB=0.74611;SGB=53.5223;VDB=0.205465;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.6:4248135 chr06:004248135 0 W/4248135-4248135 FN837-S Single Base Substitution C-A INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN812-S.SNP.6:4259393 chr06:004259393 0 W/4259393-4259393 FN812-S Single Base Substitution G-A INTRON HOMO SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2559-S.SNP.6:4262221 chr06:004262221 0 W/4262221-4262221 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.755984;DP=4581;DP4=2235,2107,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.48506e-05;MQSB=0.997595;RPB=0.94415;SGB=40.3588;VDB=0.187503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1114L|1415|LOC_Os06g08560|protein_coding|CODING|LOC_Os06g08560.1|29|1) FN2417.SNP.6:4270214 chr06:004270214 0 W/4270214-4270214 FN2417 SNP G -> T AC=1;AN=200;BQB=0.916116;DP=3640;DP4=1906,1418,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91659e-09;MQSB=0.903163;RPB=0.103154;SGB=32.0901;VDB=0.123095;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L348|445|LOC_Os06g08580|protein_coding|CODING|LOC_Os06g08580.1|1|1),UTR_5_PRIME(MODIFIER||2076||388|LOC_Os06g08570|protein_coding|CODING|LOC_Os06g08570.1|1|1) FN-63.SNP.6:4275191 chr06:004275191 0 W/4275191-4275191 FN-63 Single Base Substitution T-G INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1057-S.SNP.6:4296845 chr06:004296845 0 W/4296845-4296845 FN1057-S Single Base Substitution G-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-348.SNP.6:4301177 chr06:004301177 0 W/4301177-4301177 FN-348 Single Base Substitution A-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN2780-S.SNP.6:4305915 chr06:004305915 0 W/4305915-4305915 FN2780-S SNP G -> T AC=1;AN=198;BQB=0.969241;DP=4012;DP4=1708,2040,9,17;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=2.75123e-07;MQSB=0.15422;RPB=0.663296;SGB=-39.0698;VDB=0.959407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.6:4322810 chr06:004322810 0 W/4322810-4322810 FN1170-S Single Base Substitution G-T STOP_GAINED HET LOC_Os06g08670 glutathione peroxidase, putative, expressed SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3382-S.SNP.6:4326127 chr06:004326127 0 W/4326127-4326127 FN3382-S SNP T -> C AC=1;AN=184;BQB=0.380606;DP=2966;DP4=1478,1386,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.78054e-05;MQSB=0.999917;RPB=0.0525258;SGB=18.2315;VDB=0.248649;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.6:4329662 chr06:004329662 0 W/4329662-4329662 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1761-S.SNP.6:4337561 chr06:004337561 0 W/4337561-4337561 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.962406;DP=4144;DP4=1698,2390,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0;MQB=6.37524e-05;MQSB=0.518933;RPB=0.702516;SGB=-14.9998;VDB=0.0651414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.6:4343114 chr06:004343114 0 W/4343114-4343114 FN1559-S Single Base Substitution G-A INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2163-S.SNP.6:4345060 chr06:004345060 0 W/4345060-4345060 FN2163-S SNP A -> G AC=2;AN=168;BQB=0.680176;DP=3467;DP4=1453,1916,18,22;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0;MQB=9.88878e-10;MQSB=0.00995148;RPB=0.498345;SGB=38.5303;VDB=0.553018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.6:4353714 chr06:004353714 0 W/4353714-4353714 FN3851-S SNP A -> G AC=1;AN=158;BQB=0.949135;DP=2008;DP4=1044,849,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0;MQB=0.010522;MQSB=0.0336092;RPB=0.753633;SGB=38.3284;VDB=0.681429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.6:4366992 chr06:004366992 0 W/4366992-4366992 FN3964-S SNP G -> C AC=2;AN=168;BQB=0.99053;DP=2578;DP4=1170,1272,13,18;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=8.22393e-14;MQSB=0.000897327;RPB=0.987225;SGB=-9.7719;VDB=0.0396706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D316H|617|LOC_Os06g08730|protein_coding|CODING|LOC_Os06g08730.1|9|1) FN1409-S.SNP.6:4370370 chr06:004370370 0 W/4370370-4370370 FN1409-S Single Base Substitution T-A STOP_LOST HET LOC_Os06g08730 expressed protein SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN813-S.SNP.6:4372625 chr06:004372625 0 W/4372625-4372625 FN813-S Single Base Substitution G-A INTRON HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN547-S.SNP.6:4390164 chr06:004390164 0 W/4390164-4390164 FN547-S Single Base Substitution T-A INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN1623-S.SNP.6:4392482 chr06:004392482 0 W/4392482-4392482 FN1623-S Single Base Substitution G-A INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2676-S.SNP.6:4396128 chr06:004396128 0 W/4396128-4396128 FN2676-S SNP T -> A AC=2;AN=200;BQB=0.988654;DP=4916;DP4=2626,2009,29,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.73394e-28;MQSB=0.995879;RPB=0.328865;SGB=166.451;VDB=0.439508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F539I|814|LOC_Os06g08790|protein_coding|CODING|LOC_Os06g08790.1|8|1) FN-104.SNP.6:4400486 chr06:004400486 0 W/4400486-4400486 FN-104 Single Base Substitution C-T INTRON HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3723-S.SNP.6:4401149 chr06:004401149 0 W/4401149-4401149 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.85095;DP=2669;DP4=975,1575,7,9;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0;MQB=5.78381e-10;MQSB=0.939718;RPB=0.328195;SGB=46.7622;VDB=0.0899844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.6:4401150 chr06:004401150 0 W/4401150-4401150 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.984952;DP=2671;DP4=956,1568,9,8;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0;MQB=1.04099e-09;MQSB=0.896741;RPB=0.685006;SGB=71.8647;VDB=0.235988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3546-S.SNP.6:4414471 chr06:004414471 0 W/4414471-4414471 FN3546-S SNP A -> T AC=1;AN=188;BQB=0.394679;DP=2439;DP4=1105,1043,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00161252;MQSB=0.963323;RPB=0.623152;SGB=18.4463;VDB=0.58245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.6:4414832 chr06:004414832 0 W/4414832-4414832 FN3881-S SNP T -> A AC=1;AN=158;BQB=0.992851;DP=2811;DP4=1431,1269,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0;MQB=0.000129362;MQSB=0.270432;RPB=0.149244;SGB=73.2838;VDB=0.917542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.6:4417217 chr06:004417217 0 W/4417217-4417217 FN1344-S Single Base Substitution C-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN417-S.SNP.6:4420625 chr06:004420625 0 W/4420625-4420625 FN417-S Single Base Substitution T-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1652-S.SNP.6:4421190 chr06:004421190 0 W/4421190-4421190 FN1652-S Single Base Substitution G-A INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN1650-S.SNP.6:4437310 chr06:004437310 0 W/4437310-4437310 FN1650-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os06g08850 cyclic nucleotide-gated ion channel 14, putative, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2429.SNP.6:4457664 chr06:004457664 0 W/4457664-4457664 FN2429 SNP C -> T AC=1;AN=200;BQB=0.800439;DP=4000;DP4=2117,1613,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9496e-11;MQSB=0.967069;RPB=0.786096;SGB=39.9056;VDB=0.678627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.6:4472695 chr06:004472695 0 W/4472695-4472695 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.98119;DP=4579;DP4=2110,2201,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14296e-13;MQSB=0.931392;RPB=0.356456;SGB=-9.34484;VDB=0.15925;EFF=UTR_3_PRIME(MODIFIER||5||670|LOC_Os06g08890|protein_coding|CODING|LOC_Os06g08890.1|5|1) FN2440.SNP.6:4473539 chr06:004473539 0 W/4473539-4473539 FN2440 SNP C -> T AC=1;AN=200;BQB=0.9943;DP=4716;DP4=2437,1995,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67543e-07;MQSB=0.95412;RPB=0.98698;SGB=54.2646;VDB=0.108842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D430N|670|LOC_Os06g08890|protein_coding|CODING|LOC_Os06g08890.1|4|1) FN1200-S.SNP.6:4474661 chr06:004474661 0 W/4474661-4474661 FN1200-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g08890 glutamate receptor 3.4 precursor, putative, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-218.SNP.6:4474731 chr06:004474731 0 W/4474731-4474731 FN-218 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2417.SNP.6:4478449 chr06:004478449 0 W/4478449-4478449 FN2417 SNP A -> T AC=1;AN=200;BQB=0.926399;DP=4880;DP4=2342,2316,8,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.04322e-07;MQSB=0.610708;RPB=0.961521;SGB=68.0801;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.6:4478450 chr06:004478450 0 W/4478450-4478450 FN2417 SNP G -> T AC=1;AN=200;BQB=0.796955;DP=4866;DP4=2311,2189,9,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=3.397e-08;MQSB=0.952851;RPB=0.915971;SGB=-35.7104;VDB=0.448738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.6:4482691 chr06:004482691 0 W/4482691-4482691 FN3808-S SNP T -> A AC=1;AN=190;BQB=0.525077;DP=3931;DP4=2121,1688,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00457899;MQB=0.010508;MQSB=0.585574;RPB=0.214186;SGB=44.0907;VDB=0.581913;EFF=INTRON(MODIFIER||||702|LOC_Os06g08900|protein_coding|CODING|LOC_Os06g08900.1|3|1) FN3829-S.SNP.6:4482941 chr06:004482941 0 W/4482941-4482941 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.987783;DP=4212;DP4=2844,1230,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0512821;MQB=0.920538;MQSB=0;RPB=0.292039;SGB=53.6492;VDB=0.811295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S373N|702|LOC_Os06g08900|protein_coding|CODING|LOC_Os06g08900.1|3|1) FN354-S.SNP.6:4483886 chr06:004483886 0 W/4483886-4483886 FN354-S Single Base Substitution A-G INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3364-S.SNP.6:4483918 chr06:004483918 0 W/4483918-4483918 FN3364-S SNP T -> C AC=1;AN=184;BQB=0.660578;DP=7088;DP4=3834,3079,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00112867;MQB=1.85844e-06;MQSB=3.0428e-14;RPB=0.991303;SGB=18.2315;VDB=0.169243;EFF=INTRON(MODIFIER||||702|LOC_Os06g08900|protein_coding|CODING|LOC_Os06g08900.1|2|1) FN3440-S.SNP.6:4484209 chr06:004484209 0 W/4484209-4484209 FN3440-S SNP A -> G AC=1;AN=184;BQB=0.964849;DP=6490;DP4=3053,3252,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00154083;MQB=0.00380765;MQSB=2.40464e-05;RPB=0.978192;SGB=67.4439;VDB=0.646183;EFF=INTRON(MODIFIER||||702|LOC_Os06g08900|protein_coding|CODING|LOC_Os06g08900.1|2|1) FN1096-S.SNP.6:4492420 chr06:004492420 0 W/4492420-4492420 FN1096-S Single Base Substitution T-C INTRON HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2486.SNP.6:4494078 chr06:004494078 0 W/4494078-4494078 FN2486 SNP C -> T AC=1;AN=200;BQB=0.745189;DP=5093;DP4=2503,2122,18,24;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.51507e-07;MQSB=9.06479e-13;RPB=0.999434;SGB=-45.1863;VDB=0.332647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.6:4494662 chr06:004494662 0 W/4494662-4494662 FN3990-S SNP G -> A AC=2;AN=168;BQB=0.659827;DP=2562;DP4=1199,1203,18,21;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.49384e-17;MQSB=0.239839;RPB=0.981944;SGB=123.949;VDB=0.503932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.6:4494664 chr06:004494664 0 W/4494664-4494664 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.51881;DP=2526;DP4=1181,1181,21,20;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=1.45543e-17;MQSB=0.203646;RPB=0.701629;SGB=39.9611;VDB=0.586145;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.6:4503283 chr06:004503283 0 W/4503283-4503283 FN432-S Single Base Substitution G-C INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN4038-S.SNP.6:4519301 chr06:004519301 0 W/4519301-4519301 FN4038-S SNP A -> G AC=2;AN=168;BQB=0.574897;DP=2500;DP4=1150,1146,19,29;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0;MQB=1.67619e-22;MQSB=0.952542;RPB=0.935769;SGB=173.441;VDB=0.590056;EFF=INTRON(MODIFIER||||420|LOC_Os06g08960|protein_coding|CODING|LOC_Os06g08960.1|3|1) FN2460.SNP.6:4519645 chr06:004519645 0 W/4519645-4519645 FN2460 SNP G -> A AC=2;AN=200;BQB=0.964032;DP=4627;DP4=2284,2026,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.54844e-21;MQSB=0.227421;RPB=0.82675;SGB=134.004;VDB=0.518808;EFF=INTRON(MODIFIER||||420|LOC_Os06g08960|protein_coding|CODING|LOC_Os06g08960.1|2|1) FN_827-1.SNP.6:4521221 chr06:004521221 0 W/4521221-4521221 FN_827-1 Single Base Substitution T-G Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1568-S.SNP.6:4532809 chr06:004532809 0 W/4532809-4532809 FN1568-S Single Base Substitution A-G INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN978-S.SNP.6:4535826 chr06:004535826 0 W/4535826-4535826 FN978-S Single Base Substitution G-C INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2450.SNP.6:4542015 chr06:004542015 0 W/4542015-4542015 FN2450 SNP G -> C AC=1;AN=200;BQB=0.849694;DP=5221;DP4=2166,2646,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.99712e-14;MQSB=0.971361;RPB=0.9994;SGB=22.3313;VDB=0.407348;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.6:4546367 chr06:004546367 0 W/4546367-4546367 FN-250 Single Base Substitution A-C INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN2226-S.SNP.6:4563298 chr06:004563298 0 W/4563298-4563298 FN2226-S SNP A -> T AC=1;AN=190;BQB=0.845524;DP=4790;DP4=2501,1970,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55715e-14;MQSB=0.586329;RPB=0.632424;SGB=51.7524;VDB=0.93265;EFF=INTRON(MODIFIER||||1353|LOC_Os06g09060|protein_coding|CODING|LOC_Os06g09060.1|3|1) FN1441-S.SNP.6:4575444 chr06:004575444 0 W/4575444-4575444 FN1441-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN_N1-116-1.SNP.6:4580429 chr06:004580429 0 W/4580429-4580429 FN_N1-116-1 Single Base Substitution T-G HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN416-S.SNP.6:4585575 chr06:004585575 0 W/4585575-4585575 FN416-S Single Base Substitution T-C INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2587-S.SNP.6:4586033 chr06:004586033 0 W/4586033-4586033 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.4396;DP=3804;DP4=1799,1778,30,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.4585e-30;MQSB=0.857771;RPB=0.997504;SGB=237.949;VDB=0.527032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.6:4586036 chr06:004586036 0 W/4586036-4586036 FN2587-S SNP C -> T AC=2;AN=198;BQB=0.888025;DP=3810;DP4=1758,1780,31,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.87583e-32;MQSB=0.875491;RPB=0.993799;SGB=177.4;VDB=0.301135;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.6:4587335 chr06:004587335 0 W/4587335-4587335 FN1280-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3846-S.SNP.6:4595272 chr06:004595272 0 W/4595272-4595272 FN3846-S SNP A -> G AC=2;AN=190;BQB=0.999614;DP=3021;DP4=1308,1608,9,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.42498e-13;MQSB=0.930123;RPB=0.251472;SGB=108.296;VDB=0.168974;EFF=INTRON(MODIFIER||||682|LOC_Os06g09130|protein_coding|CODING|LOC_Os06g09130.1|3|1) FN4123-S.SNP.6:4612761 chr06:004612761 0 W/4612761-4612761 FN4123-S SNP G -> T AC=2;AN=182;BQB=0.627494;DP=3000;DP4=1524,1316,14,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.55089e-11;MQSB=0.963923;RPB=0.981068;SGB=120.796;VDB=0.667591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V70L|352|LOC_Os06g09170|protein_coding|CODING|LOC_Os06g09170.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V70L|352|LOC_Os06g09170|protein_coding|CODING|LOC_Os06g09170.2|2|1) FN3979-S.SNP.6:4621794 chr06:004621794 0 W/4621794-4621794 FN3979-S SNP C -> T AC=1;AN=168;BQB=0.439378;DP=1512;DP4=887,538,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00013043;MQSB=0.99716;RPB=0.253865;SGB=52.1728;VDB=0.0501753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.6:4623862 chr06:004623862 0 W/4623862-4623862 FN3807-S SNP A -> T AC=1;AN=190;BQB=0.413686;DP=2710;DP4=1273,1311,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000762932;MQSB=0.998495;RPB=0.549921;SGB=35.4339;VDB=0.567736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.6:4650024 chr06:004650024 0 W/4650024-4650024 FN1140-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g09250 expressed protein SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3445-S.SNP.6:4650330 chr06:004650330 0 W/4650330-4650330 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.905169;DP=3392;DP4=1491,1809,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.17007e-08;MQSB=0.99321;RPB=0.812623;SGB=48.7425;VDB=0.746961;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.6:4655930 chr06:004655930 0 W/4655930-4655930 FN4072-S SNP G -> A AC=1;AN=182;BQB=0.871382;DP=2460;DP4=1308,1105,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.36395e-07;MQSB=0.979106;RPB=0.583265;SGB=25.0952;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.6:4667067 chr06:004667067 0 W/4667067-4667067 FN2298 SNP T -> A AC=1;AN=192;BQB=0.754807;DP=4935;DP4=2269,2393,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.219e-14;MQSB=0.896053;RPB=1;SGB=99.4183;VDB=0.402273;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.6:4673354 chr06:004673354 0 W/4673354-4673354 FN-165 Single Base Substitution A-T INTRON HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3368-S.SNP.6:4673354 chr06:004673354 0 W/4673354-4673354 FN3368-S SNP A -> T AC=2;AN=184;BQB=0.978756;DP=3478;DP4=1535,1702,23,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.86979e-17;MQSB=0.998648;RPB=0.46678;SGB=73.7109;VDB=0.0301286;EFF=INTRON(MODIFIER||||146|LOC_Os06g09300|protein_coding|CODING|LOC_Os06g09300.1|1|1) W472-5-1.SNP.6:4673354 chr06:004673354 0 W/4673354-4673354 W472-5-1 Single Base Substitution A-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2754-S.SNP.6:4675446 chr06:004675446 0 W/4675446-4675446 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.999904;DP=5156;DP4=2471,2427,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25836e-11;MQSB=0.959003;RPB=0.995365;SGB=29.4849;VDB=0.304812;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.6:4681255 chr06:004681255 0 W/4681255-4681255 FN951-S Single Base Substitution A-G INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN951-S.SNP.6:4681259 chr06:004681259 0 W/4681259-4681259 FN951-S Single Base Substitution A-G INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2317.SNP.6:4684129 chr06:004684129 0 W/4684129-4684129 FN2317 SNP A -> C AC=2;AN=192;BQB=0.511181;DP=4936;DP4=2439,2249,16,7;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.58913e-10;MQSB=0.814162;RPB=0.753457;SGB=71.8591;VDB=0.690334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.6:4684384 chr06:004684384 0 W/4684384-4684384 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.957435;DP=2658;DP4=1422,1148,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17735e-05;MQSB=0.956642;RPB=0.276201;SGB=30.6558;VDB=0.018391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.6:4694835 chr06:004694835 0 W/4694835-4694835 FN1286-S Single Base Substitution A-G INTRON HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2398.SNP.6:4727278 chr06:004727278 0 W/4727278-4727278 FN2398 SNP A -> C AC=1;AN=200;BQB=0.879861;DP=4889;DP4=2071,2452,6,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22982e-13;MQSB=0.802757;RPB=0.256551;SGB=-8.87404;VDB=0.440321;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.6:4728958 chr06:004728958 0 W/4728958-4728958 FN-93 Single Base Substitution G-A INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3707-S.SNP.6:4730612 chr06:004730612 0 W/4730612-4730612 FN3707-S SNP A -> T AC=1;AN=190;BQB=0.958189;DP=2501;DP4=1210,1216,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18692e-05;MQSB=0.999687;RPB=0.463647;SGB=18.3316;VDB=0.414968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.6:4741712 chr06:004741712 0 W/4741712-4741712 FN2780-S SNP C -> A AC=1;AN=198;BQB=0.986187;DP=4272;DP4=1876,2188,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.99621e-08;MQSB=0.973313;RPB=0.544366;SGB=21.559;VDB=0.00429357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.6:4741713 chr06:004741713 0 W/4741713-4741713 FN2780-S SNP G -> T AC=1;AN=198;BQB=0.65887;DP=4265;DP4=1874,2193,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.36386e-07;MQSB=0.972591;RPB=0.663267;SGB=36.5539;VDB=0.00362581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.6:4745359 chr06:004745359 0 W/4745359-4745359 FN1452-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3772-S.SNP.6:4752267 chr06:004752267 0 W/4752267-4752267 FN3772-S SNP C -> T AC=2;AN=190;BQB=0.870348;DP=2816;DP4=1385,1333,11,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.18686e-10;MQSB=0.999614;RPB=0.820848;SGB=50.3161;VDB=0.0251638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.6:4753942 chr06:004753942 0 W/4753942-4753942 FN3676-S SNP T -> C AC=1;AN=190;BQB=0.997985;DP=3224;DP4=1379,1726,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20218e-11;MQSB=0.959432;RPB=0.301712;SGB=94.6341;VDB=0.221237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.6:4757629 chr06:004757629 0 W/4757629-4757629 FN2580-S SNP C -> A AC=1;AN=198;BQB=0.965233;DP=3936;DP4=2136,1631,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.08349e-07;MQSB=0.565794;RPB=0.758168;SGB=29.3637;VDB=0.0565272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.6:4760817 chr06:004760817 0 W/4760817-4760817 FN3848-S SNP G -> A AC=2;AN=158;BQB=0.78934;DP=1591;DP4=639,849,7,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.83574e-10;MQSB=0.829911;RPB=0.749893;SGB=73.2838;VDB=0.0713685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.6:4762998 chr06:004762998 0 W/4762998-4762998 FN-268 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g09420 B3 DNA binding domain containing protein, expressed SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3382-S.SNP.6:4763333 chr06:004763333 0 W/4763333-4763333 FN3382-S SNP T -> C AC=1;AN=184;BQB=0.979887;DP=3294;DP4=1531,1578,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.69957e-12;MQSB=0.972706;RPB=0.372678;SGB=63.9222;VDB=0.535172;EFF=INTRON(MODIFIER||||237|LOC_Os06g09420|protein_coding|CODING|LOC_Os06g09420.1|5|1) FN2202-S.SNP.6:4765127 chr06:004765127 0 W/4765127-4765127 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.703349;DP=4858;DP4=2370,2232,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13471e-10;MQSB=0.64498;RPB=0.985938;SGB=38.983;VDB=0.0177042;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.6:4767770 chr06:004767770 0 W/4767770-4767770 FN1561-S Single Base Substitution T-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-223.SNP.6:4773081 chr06:004773081 0 W/4773081-4773081 FN-223 Single Base Substitution G-A INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN1749-S.SNP.6:4773429 chr06:004773429 0 W/4773429-4773429 FN1749-S SNP C -> G AC=2;AN=188;BQB=0.422826;DP=1370;DP4=831,467,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.92923e-11;MQSB=0.983471;RPB=0.929115;SGB=42.5227;VDB=0.0328518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.6:4773861 chr06:004773861 0 W/4773861-4773861 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.911598;DP=3014;DP4=1482,1447,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39248e-11;MQSB=0.984619;RPB=0.663323;SGB=14.4113;VDB=0.49295;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.6:4774133 chr06:004774133 0 W/4774133-4774133 FN-168 Single Base Substitution G-A INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN3390-S.SNP.6:4776287 chr06:004776287 0 W/4776287-4776287 FN3390-S SNP A -> G AC=1;AN=184;BQB=0.998267;DP=3015;DP4=1435,1396,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.73929e-07;MQSB=0.978283;RPB=0.846852;SGB=25.1826;VDB=0.845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.6:4776556 chr06:004776556 0 W/4776556-4776556 FN3834-S SNP T -> C AC=1;AN=190;BQB=0.981226;DP=2587;DP4=1264,1238,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35816e-06;MQSB=0.958744;RPB=0.418015;SGB=44.5415;VDB=0.000253712;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.6:4781945 chr06:004781945 0 W/4781945-4781945 FN1625-S Single Base Substitution G-A INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN3064-S.SNP.6:4799515 chr06:004799515 0 W/4799515-4799515 FN3064-S SNP A -> T AC=1;AN=184;BQB=0.997461;DP=2922;DP4=1455,1348,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.15501e-10;MQSB=0.951112;RPB=0.481222;SGB=25.7969;VDB=0.274182;EFF=INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.1|7|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.2|7|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.3|7|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.4|6|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.5|8|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.6|8|1),INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.7|7|1),INTRON(MODIFIER||||803|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.8|7|1) FN2485.SNP.6:4804024 chr06:004804024 0 W/4804024-4804024 FN2485 SNP G -> T AC=1;AN=200;BQB=0.268687;DP=4711;DP4=2200,2165,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84936e-08;MQSB=0.998404;RPB=0.9101;SGB=-13.1102;VDB=0.596146;EFF=INTRON(MODIFIER||||808|LOC_Os06g09450|protein_coding|CODING|LOC_Os06g09450.3|1|1) FN558-S.SNP.6:4814899 chr06:004814899 0 W/4814899-4814899 FN558-S Single Base Substitution C-T INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4224-S.SNP.6:4826766 chr06:004826766 0 W/4826766-4826766 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.489164;DP=2997;DP4=1342,1580,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.022022;MQB=0.510275;MQSB=0;RPB=0.993369;SGB=56.7575;VDB=0.35717;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.6:4834329 chr06:004834329 0 W/4834329-4834329 FN819-S Single Base Substitution G-A INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN_772-3-1.SNP.6:4836429 chr06:004836429 0 W/4836429-4836429 FN_772-3-1 Single Base Substitution T-C HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1521-S.SNP.6:4838299 chr06:004838299 0 W/4838299-4838299 FN1521-S Single Base Substitution T-A INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2479.SNP.6:4861483 chr06:004861483 0 W/4861483-4861483 FN2479 SNP G -> A AC=1;AN=200;BQB=0.806215;DP=4916;DP4=2312,2230,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.66317e-10;MQSB=0.992895;RPB=0.946633;SGB=-12.5051;VDB=0.577991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.6:4872497 chr06:004872497 0 W/4872497-4872497 FN3773-S SNP T -> G AC=2;AN=190;BQB=0.555333;DP=2870;DP4=1466,1291,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.26097e-13;MQSB=0.973033;RPB=0.946284;SGB=-10.4526;VDB=0.321036;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E297D|676|LOC_Os06g09570|protein_coding|CODING|LOC_Os06g09570.1|2|1) FN2407.SNP.6:4885459 chr06:004885459 0 W/4885459-4885459 FN2407 SNP T -> C AC=1;AN=200;BQB=0.913132;DP=4680;DP4=1855,2631,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000213675;MQB=2.1653e-07;MQSB=0.830608;RPB=0.96539;SGB=45.0543;VDB=0.507556;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.6:4885471 chr06:004885471 0 W/4885471-4885471 FN4304-S SNP G -> A AC=2;AN=170;BQB=0.994284;DP=2452;DP4=996,1369,14,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.54446e-14;MQSB=0.872728;RPB=0.420614;SGB=101.184;VDB=0.555114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.6:4890513 chr06:004890513 0 W/4890513-4890513 FN1060-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g09610 peroxiredoxin, putative, expressed SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1060-S.SNP.6:4890530 chr06:004890530 0 W/4890530-4890530 FN1060-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2326.SNP.6:4891163 chr06:004891163 0 W/4891163-4891163 FN2326 SNP T -> C AC=1;AN=192;BQB=0.451077;DP=4686;DP4=2105,2183,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.94082e-06;MQSB=0.513659;RPB=0.99666;SGB=-15.8974;VDB=0.9241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.6:4909959 chr06:004909959 0 W/4909959-4909959 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.998578;DP=3559;DP4=1726,1716,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00871031;MQB=0.000444838;MQSB=0.125487;RPB=0.679072;SGB=32.2261;VDB=0.68905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E802K|1815|LOC_Os06g09650|protein_coding|CODING|LOC_Os06g09650.1|2|1) FN4234-S.SNP.6:4912842 chr06:004912842 0 W/4912842-4912842 FN4234-S SNP G -> T AC=1;AN=170;BQB=0.894858;DP=1956;DP4=934,971,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.000215311;MQSB=0.000159477;RPB=0.805973;SGB=47.8722;VDB=0.0941262;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.6:4917868 chr06:004917868 0 W/4917868-4917868 FN-379 Single Base Substitution A-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN3770-S.SNP.6:4918417 chr06:004918417 0 W/4918417-4918417 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.845422;DP=2903;DP4=1509,1286,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.1068e-08;MQSB=0.922124;RPB=0.989248;SGB=67.3108;VDB=0.5843;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.6:4931223 chr06:004931223 0 W/4931223-4931223 FN-169 Single Base Substitution C-T INTRON HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3302-S.SNP.6:4950008 chr06:004950008 0 W/4950008-4950008 FN3302-S SNP G -> T AC=1;AN=184;BQB=0.669136;DP=2661;DP4=1320,1279,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.16723;MQB=0.428608;MQSB=0.00860328;RPB=0.506199;SGB=35.1773;VDB=0.371445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G46V|216|LOC_Os06g09688|protein_coding|CODING|LOC_Os06g09688.1|2|1) FN762-S.SNP.6:4968432 chr06:004968432 0 W/4968432-4968432 FN762-S Single Base Substitution C-A INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2625-S.SNP.6:4971045 chr06:004971045 0 W/4971045-4971045 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.825832;DP=5031;DP4=2335,2405,10,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.71535e-16;MQSB=0.800102;RPB=0.977949;SGB=60.747;VDB=0.453526;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.6:4985635 chr06:004985635 0 W/4985635-4985635 FN689-S Single Base Substitution G-A INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2438.SNP.6:4985829 chr06:004985829 0 W/4985829-4985829 FN2438 SNP G -> A AC=1;AN=200;BQB=0.995467;DP=4518;DP4=2299,2048,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221337;MQB=2.59093e-06;MQSB=0.80246;RPB=0.804752;SGB=54.2646;VDB=0.474283;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.6:4986931 chr06:004986931 0 W/4986931-4986931 FN3287-S SNP A -> C AC=1;AN=184;BQB=0.998356;DP=2549;DP4=1227,1221,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19207e-08;MQSB=0.990893;RPB=0.205399;SGB=62.3078;VDB=0.545637;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.6:4992319 chr06:004992319 0 W/4992319-4992319 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3286-S.SNP.6:5012289 chr06:005012289 0 W/5012289-5012289 FN3286-S SNP A -> T AC=1;AN=184;BQB=0.943353;DP=2817;DP4=1350,1371,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11268e-06;MQSB=0.886546;RPB=0.694923;SGB=25.1826;VDB=0.884681;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.6:5022197 chr06:005022197 0 W/5022197-5022197 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.750239;DP=3270;DP4=1506,1674,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41625e-07;MQSB=0.986281;RPB=0.735217;SGB=13.4442;VDB=0.864626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.6:5026353 chr06:005026353 0 W/5026353-5026353 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3639-S.SNP.6:5029825 chr06:005029825 0 W/5029825-5029825 FN3639-S SNP A -> G AC=1;AN=190;BQB=0.813616;DP=2587;DP4=1242,1279,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81444e-06;MQSB=0.959095;RPB=0.520474;SGB=53.6492;VDB=0.198993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S1323P|1442|LOC_Os06g09880|protein_coding|CODING|LOC_Os06g09880.1|4|1) FN1523-S.SNP.6:5035783 chr06:005035783 0 W/5035783-5035783 FN1523-S Single Base Substitution G-A INTERGENIC HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1456-S.SNP.6:5036271 chr06:005036271 0 W/5036271-5036271 FN1456-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3639-S.SNP.6:5036662 chr06:005036662 0 W/5036662-5036662 FN3639-S SNP G -> A AC=1;AN=190;BQB=0.990443;DP=2895;DP4=1427,1377,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.90212e-10;MQSB=0.973278;RPB=0.982563;SGB=71.8647;VDB=0.510804;EFF=UTR_3_PRIME(MODIFIER||41||465|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.3|5|1),UTR_3_PRIME(MODIFIER||933||386|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.6|4|1),UTR_3_PRIME(MODIFIER||933||386|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.5|3|1),INTRON(MODIFIER||||531|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.1|5|1),INTRON(MODIFIER||||531|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.2|4|1),INTRON(MODIFIER||||531|LOC_Os06g09890|protein_coding|CODING|LOC_Os06g09890.4|5|1) FN2259-S.SNP.6:5041797 chr06:005041797 0 W/5041797-5041797 FN2259-S SNP G -> T AC=2;AN=190;BQB=0.846996;DP=5396;DP4=2571,2366,20,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15323e-19;MQSB=0.917609;RPB=0.869236;SGB=82.3989;VDB=0.512698;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.6:5041920 chr06:005041920 0 W/5041920-5041920 FN733-S Single Base Substitution G-T INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN-252.SNP.6:5056263 chr06:005056263 0 W/5056263-5056263 FN-252 Single Base Substitution A-T INTRON HOMO SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN760-S.SNP.6:5056931 chr06:005056931 0 W/5056931-5056931 FN760-S Single Base Substitution A-T INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN-64.SNP.6:5059846 chr06:005059846 0 W/5059846-5059846 FN-64 Single Base Substitution G-A INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN910-S.SNP.6:5069510 chr06:005069510 0 W/5069510-5069510 FN910-S Single Base Substitution A-G INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3412-S.SNP.6:5088558 chr06:005088558 0 W/5088558-5088558 FN3412-S SNP G -> T AC=2;AN=184;BQB=0.838693;DP=3234;DP4=1603,1499,15,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.35291e-18;MQSB=0.917982;RPB=0.476053;SGB=-5.84361;VDB=0.757943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.6:5088845 chr06:005088845 0 W/5088845-5088845 FN1413-S Single Base Substitution T-C INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1038-S.SNP.6:5091064 chr06:005091064 0 W/5091064-5091064 FN1038-S Single Base Substitution C-A INTRON HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN_949-1.SNP.6:5091847 chr06:005091847 0 W/5091847-5091847 FN_949-1 Single Base Substitution T-C Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN3576-S.SNP.6:5108167 chr06:005108167 0 W/5108167-5108167 FN3576-S SNP G -> A AC=1;AN=188;BQB=0.828852;DP=2776;DP4=1297,1408,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20769e-11;MQSB=0.959062;RPB=0.28883;SGB=85.3253;VDB=0.210622;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.6:5111272 chr06:005111272 0 W/5111272-5111272 FN1036-S Single Base Substitution G-A INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN2118-S.SNP.6:5111272 chr06:005111272 0 W/5111272-5111272 FN2118-S SNP G -> A AC=2;AN=168;BQB=0.519292;DP=3743;DP4=2034,1635,30,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.26596e-30;MQSB=0.585016;RPB=0.984895;SGB=3.58342;VDB=0.179984;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.6:5111272 chr06:005111272 0 W/5111272-5111272 FN811-S Single Base Substitution G-A INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2198-S.SNP.6:5113827 chr06:005113827 0 W/5113827-5113827 FN2198-S SNP T -> A AC=1;AN=190;BQB=0.0957901;DP=4618;DP4=2079,2174,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05173e-09;MQSB=0.998451;RPB=0.983239;SGB=-37.2167;VDB=0.841787;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.6:5122633 chr06:005122633 0 W/5122633-5122633 FN908-S Single Base Substitution T-A INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN4134-S.SNP.6:5132312 chr06:005132312 0 W/5132312-5132312 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.961463;DP=3341;DP4=1622,1653,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.22519e-09;MQSB=0.942315;RPB=0.877065;SGB=57.644;VDB=0.730398;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.6:5141046 chr06:005141046 0 W/5141046-5141046 FN_N2-29a-1 Single Base Substitution C-T HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2657-S.SNP.6:5145788 chr06:005145788 0 W/5145788-5145788 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.778993;DP=4966;DP4=2508,2171,13,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.92817e-06;MQSB=0.235691;RPB=0.326163;SGB=81.8956;VDB=0.212125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.6:5146983 chr06:005146983 0 W/5146983-5146983 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.956116;DP=4831;DP4=2508,2045,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26737e-10;MQSB=0.663779;RPB=0.770521;SGB=37.3004;VDB=0.645557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.6:5149603 chr06:005149603 0 W/5149603-5149603 FN2233-S SNP T -> C AC=2;AN=190;BQB=0.83525;DP=5117;DP4=2413,2244,15,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.000195427;MQB=2.63992e-13;MQSB=0.109458;RPB=0.219623;SGB=96.5165;VDB=0.129745;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.6:5166088 chr06:005166088 0 W/5166088-5166088 FN-155 Single Base Substitution A-G INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. W385-6-8-4.SNP.6:5167072 chr06:005167072 0 W/5167072-5167072 W385-6-8-4 Single Base Substitution A-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN4141-S.SNP.6:5171564 chr06:005171564 0 W/5171564-5171564 FN4141-S SNP A -> G AC=2;AN=170;BQB=0.999434;DP=2603;DP4=1299,1222,20,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.63641e-17;MQSB=0.9593;RPB=0.722143;SGB=127.84;VDB=0.0572092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.6:5173426 chr06:005173426 0 W/5173426-5173426 FN4071-S SNP A -> T AC=1;AN=182;BQB=0.471214;DP=2356;DP4=1189,1120,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000102045;MQSB=0.996549;RPB=0.388281;SGB=48.6223;VDB=0.259328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.6:5173487 chr06:005173487 0 W/5173487-5173487 FN1333-S Single Base Substitution C-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2701-S.SNP.6:5175295 chr06:005175295 0 W/5175295-5175295 FN2701-S SNP C -> G AC=1;AN=200;BQB=0.974059;DP=4857;DP4=2436,2172,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.59641e-08;MQSB=0.957532;RPB=0.992591;SGB=40.2696;VDB=0.121425;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.6:5178896 chr06:005178896 0 W/5178896-5178896 FN579-S Single Base Substitution G-C INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1249-S.SNP.6:5180411 chr06:005180411 0 W/5180411-5180411 FN1249-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2553-S.SNP.6:5191282 chr06:005191282 0 W/5191282-5191282 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.857215;DP=3945;DP4=1949,1754,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.26801e-06;MQSB=0.956564;RPB=0.687388;SGB=18.9639;VDB=0.0702664;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.6:5197792 chr06:005197792 0 W/5197792-5197792 FN4129-S SNP C -> T AC=2;AN=182;BQB=0.998737;DP=2818;DP4=1504,1226,14,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.94133e-15;MQSB=0.96944;RPB=0.162488;SGB=81.2689;VDB=0.68317;EFF=INTRON(MODIFIER||||426|LOC_Os06g10160|protein_coding|CODING|LOC_Os06g10160.1|3|1) FN1293-S.SNP.6:5206565 chr06:005206565 0 W/5206565-5206565 FN1293-S Single Base Substitution A-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1255-S.SNP.6:5215382 chr06:005215382 0 W/5215382-5215382 FN1255-S Single Base Substitution T-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2377.SNP.6:5220731 chr06:005220731 0 W/5220731-5220731 FN2377 SNP G -> A AC=2;AN=192;BQB=0.948695;DP=5361;DP4=2682,2334,48,43;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=0;MQSB=0.986376;RPB=0.995189;SGB=354.184;VDB=0.669747;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.6:5221447 chr06:005221447 0 W/5221447-5221447 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2089-S.SNP.6:5223549 chr06:005223549 0 W/5223549-5223549 FN2089-S SNP T -> C AC=2;AN=168;BQB=0.52103;DP=3898;DP4=1863,1982,11,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.20153e-15;MQSB=0.98184;RPB=0.493489;SGB=-8.91027;VDB=0.0135683;EFF=UTR_3_PRIME(MODIFIER||431||147|LOC_Os06g10200|protein_coding|CODING|LOC_Os06g10200.4|5|1),INTRON(MODIFIER||||147|LOC_Os06g10200|protein_coding|CODING|LOC_Os06g10200.1|5|1),INTRON(MODIFIER||||222|LOC_Os06g10200|protein_coding|CODING|LOC_Os06g10200.2|6|1),INTRON(MODIFIER||||147|LOC_Os06g10200|protein_coding|CODING|LOC_Os06g10200.3|5|1) FN3506-S.SNP.6:5229545 chr06:005229545 0 W/5229545-5229545 FN3506-S SNP T -> A AC=2;AN=188;BQB=0.790078;DP=2659;DP4=1281,1268,4,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.85447e-12;MQSB=0.928374;RPB=0.932075;SGB=108.042;VDB=0.106773;EFF=INTRON(MODIFIER||||429|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.1|3|1),INTRON(MODIFIER||||428|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.2|3|1),INTRON(MODIFIER||||382|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.3|3|1) FN3632-S.SNP.6:5230275 chr06:005230275 0 W/5230275-5230275 FN3632-S SNP A -> T AC=2;AN=190;BQB=0.896967;DP=2984;DP4=1439,1369,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4255e-24;MQSB=0.967115;RPB=0.946314;SGB=92.6144;VDB=0.153838;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E305D|429|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E305D|428|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E305D|382|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.3|6|1) FN3632-S.SNP.6:5230276 chr06:005230276 0 W/5230276-5230276 FN3632-S SNP A -> T AC=2;AN=190;BQB=0.524405;DP=2989;DP4=1495,1375,18,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.41638e-26;MQSB=0.936676;RPB=0.931068;SGB=132.055;VDB=0.107373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N306Y|429|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N306Y|428|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N306Y|382|LOC_Os06g10210|protein_coding|CODING|LOC_Os06g10210.3|6|1) FN319-S.SNP.6:5257785 chr06:005257785 0 W/5257785-5257785 FN319-S Single Base Substitution A-G INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN771-S.SNP.6:5263725 chr06:005263725 0 W/5263725-5263725 FN771-S Single Base Substitution C-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN503-S.SNP.6:5278420 chr06:005278420 0 W/5278420-5278420 FN503-S Single Base Substitution A-G INTRON HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2594-S.SNP.6:5278427 chr06:005278427 0 W/5278427-5278427 FN2594-S SNP A -> T AC=1;AN=198;BQB=0.932216;DP=4367;DP4=2069,2086,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.53151e-10;MQSB=0.862471;RPB=0.949619;SGB=54.5295;VDB=0.487151;EFF=INTRON(MODIFIER||||436|LOC_Os06g10280|protein_coding|CODING|LOC_Os06g10280.1|13|1) FN946-S.SNP.6:5278448 chr06:005278448 0 W/5278448-5278448 FN946-S Single Base Substitution A-G INTRON HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN3595-S.SNP.6:5278603 chr06:005278603 0 W/5278603-5278603 FN3595-S SNP T -> C AC=2;AN=190;BQB=0.997592;DP=2797;DP4=1487,1203,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2092e-12;MQSB=0.783376;RPB=0.895221;SGB=94.6341;VDB=0.623515;EFF=INTRON(MODIFIER||||436|LOC_Os06g10280|protein_coding|CODING|LOC_Os06g10280.1|13|1) FN2708-S.SNP.6:5281039 chr06:005281039 0 W/5281039-5281039 FN2708-S SNP A -> T AC=1;AN=200;BQB=0.978854;DP=4572;DP4=2413,1971,14,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49569e-08;MQSB=0.991408;RPB=0.842665;SGB=9.48993;VDB=0.433204;EFF=INTRON(MODIFIER||||436|LOC_Os06g10280|protein_coding|CODING|LOC_Os06g10280.1|9|1) FN1414-S.SNP.6:5286483 chr06:005286483 0 W/5286483-5286483 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN738-S.SNP.6:5286483 chr06:005286483 0 W/5286483-5286483 FN738-S Single Base Substitution C-T INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2424.SNP.6:5295364 chr06:005295364 0 W/5295364-5295364 FN2424 SNP C -> T AC=1;AN=200;BQB=0.927703;DP=3874;DP4=2054,1649,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.122e-08;MQSB=0.817847;RPB=0.750177;SGB=32.0901;VDB=0.5892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R115C|518|LOC_Os06g10300|protein_coding|CODING|LOC_Os06g10300.1|1|1) FN1198-S.SNP.6:5302506 chr06:005302506 0 W/5302506-5302506 FN1198-S Single Base Substitution T-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1198-S.SNP.6:5302507 chr06:005302507 0 W/5302507-5302507 FN1198-S Single Base Substitution T-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN3710-S.SNP.6:5308305 chr06:005308305 0 W/5308305-5308305 FN3710-S SNP C -> G AC=1;AN=190;BQB=0.780478;DP=2294;DP4=1118,1103,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000324416;MQSB=0.992924;RPB=0.808049;SGB=25.439;VDB=0.431287;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.6:5314768 chr06:005314768 0 W/5314768-5314768 FN598-S Single Base Substitution C-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN_546-3-1.SNP.6:5315069 chr06:005315069 0 W/5315069-5315069 FN_546-3-1 Single Base Substitution T-G HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2372.SNP.6:5316846 chr06:005316846 0 W/5316846-5316846 FN2372 SNP G -> T AC=1;AN=192;BQB=0.80819;DP=4602;DP4=2294,1967,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0380269;MQB=0.791512;MQSB=0;RPB=0.94572;SGB=108.547;VDB=0.287499;EFF=UTR_3_PRIME(MODIFIER||288||271|LOC_Os06g10350|protein_coding|CODING|LOC_Os06g10350.1|3|1) FN3500-S.SNP.6:5319115 chr06:005319115 0 W/5319115-5319115 FN3500-S SNP G -> A AC=1;AN=188;BQB=0.910634;DP=3554;DP4=1410,2062,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29974e-11;MQSB=0.766513;RPB=0.142379;SGB=76.2387;VDB=0.591982;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.6:5320001 chr06:005320001 0 W/5320001-5320001 FN891-S Single Base Substitution C-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN891-S.SNP.6:5320002 chr06:005320002 0 W/5320002-5320002 FN891-S Single Base Substitution A-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2692-S.SNP.6:5324009 chr06:005324009 0 W/5324009-5324009 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.9925;DP=4603;DP4=2242,2065,8,14;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0623506;MQB=0.964462;MQSB=9.59129e-15;RPB=0.990638;SGB=69.1109;VDB=0.402188;EFF=INTRON(MODIFIER||||864|LOC_Os06g10360|protein_coding|CODING|LOC_Os06g10360.1|2|1) FN2572-S.SNP.6:5324569 chr06:005324569 0 W/5324569-5324569 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.000125641;DP=4515;DP4=2256,1954,24,45;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.145736;MQB=2.32778e-07;MQSB=2.8026e-45;RPB=0.424629;SGB=-661.961;VDB=0.079537;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H359|864|LOC_Os06g10360|protein_coding|CODING|LOC_Os06g10360.1|3|1) FN521-S.SNP.6:5334656 chr06:005334656 0 W/5334656-5334656 FN521-S Single Base Substitution G-A SPLICE_SITE_DONOR HOMO LOC_Os06g10380 transposon protein, putative, CACTA, En/Spm sub-class SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN521-S.SNP.6:5334657 chr06:005334657 0 W/5334657-5334657 FN521-S Single Base Substitution T-A SPLICE_SITE_DONOR HOMO LOC_Os06g10380 transposon protein, putative, CACTA, En/Spm sub-class SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN1045-S.SNP.6:5343416 chr06:005343416 0 W/5343416-5343416 FN1045-S Single Base Substitution C-T INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2292.SNP.6:5346612 chr06:005346612 0 W/5346612-5346612 FN2292 SNP C -> T AC=1;AN=192;BQB=0.985479;DP=4924;DP4=2504,2189,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.46506e-12;MQSB=0.96039;RPB=0.999795;SGB=15.1765;VDB=0.939134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D504N|745|LOC_Os06g10410|protein_coding|CODING|LOC_Os06g10410.1|3|1) FN953-S.SNP.6:5351298 chr06:005351298 0 W/5351298-5351298 FN953-S Single Base Substitution A-G INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2331.SNP.6:5361613 chr06:005361613 0 W/5361613-5361613 FN2331 SNP T -> A AC=1;AN=192;BQB=0.506836;DP=4496;DP4=1894,2363,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.40751e-09;MQSB=0.863497;RPB=0.180045;SGB=28.9139;VDB=0.738593;EFF=INTRON(MODIFIER||||865|LOC_Os06g10430|protein_coding|CODING|LOC_Os06g10430.1|4|1),INTRON(MODIFIER||||858|LOC_Os06g10430|protein_coding|CODING|LOC_Os06g10430.2|4|1),INTRON(MODIFIER||||854|LOC_Os06g10430|protein_coding|CODING|LOC_Os06g10430.3|4|1) FN-215.SNP.6:5374216 chr06:005374216 0 W/5374216-5374216 FN-215 Single Base Substitution T-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN_955-1.SNP.6:5379354 chr06:005379354 0 W/5379354-5379354 FN_955-1 Single Base Substitution A-G Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN962-S.SNP.6:5379460 chr06:005379460 0 W/5379460-5379460 FN962-S Single Base Substitution T-G INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1401-S.SNP.6:5380373 chr06:005380373 0 W/5380373-5380373 FN1401-S Single Base Substitution A-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3504-S.SNP.6:5385871 chr06:005385871 0 W/5385871-5385871 FN3504-S SNP G -> C AC=1;AN=188;BQB=0.95605;DP=2791;DP4=1520,1144,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.69811e-06;MQSB=0.988275;RPB=0.936466;SGB=21.8113;VDB=0.778467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.6:5390319 chr06:005390319 0 W/5390319-5390319 FN2401 SNP G -> T AC=1;AN=200;BQB=0.56184;DP=4469;DP4=1961,2114,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.04893e-15;MQSB=0.873581;RPB=0.999698;SGB=-5.84819;VDB=0.942791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.6:5392882 chr06:005392882 0 W/5392882-5392882 FN2096-S SNP A -> G AC=1;AN=168;BQB=0.00648857;DP=3648;DP4=1492,2127,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.7446e-07;MQSB=0.952233;RPB=0.825942;SGB=-61.7914;VDB=0.750798;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.6:5405356 chr06:005405356 0 W/5405356-5405356 FN1538-S Single Base Substitution T-C INTRON Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2461.SNP.6:5406394 chr06:005406394 0 W/5406394-5406394 FN2461 SNP A -> T AC=2;AN=200;BQB=0.46875;DP=4525;DP4=2251,2018,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.02323e-22;MQSB=0.970219;RPB=0.337312;SGB=3.83453;VDB=0.785951;EFF=UTR_3_PRIME(MODIFIER||32||353|LOC_Os06g10480|protein_coding|CODING|LOC_Os06g10480.1|22|1) FN1538-S.SNP.6:5407426 chr06:005407426 0 W/5407426-5407426 FN1538-S Single Base Substitution T-C INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2756-S.SNP.6:5417713 chr06:005417713 0 W/5417713-5417713 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.995069;DP=5160;DP4=2002,2873,7,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75099e-15;MQSB=0.961878;RPB=0.899144;SGB=83.5316;VDB=0.764112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.6:5420727 chr06:005420727 0 W/5420727-5420727 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.27849;DP=2841;DP4=1450,1284,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=3.13868e-05;MQSB=0.268964;RPB=0.99971;SGB=32.441;VDB=0.796736;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.6:5421478 chr06:005421478 0 W/5421478-5421478 FN-167 Single Base Substitution T-C INTRON HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2306.SNP.6:5422603 chr06:005422603 0 W/5422603-5422603 FN2306 SNP T -> C AC=1;AN=192;BQB=0.569457;DP=5124;DP4=2593,2329,3,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00019516;MQB=0.00391247;MQSB=0.998519;RPB=0.495231;SGB=11.2679;VDB=0.23129;EFF=INTRON(MODIFIER||||666|LOC_Os06g10520|protein_coding|CODING|LOC_Os06g10520.1|3|1) FN3308-S.SNP.6:5427514 chr06:005427514 0 W/5427514-5427514 FN3308-S SNP G -> A AC=2;AN=184;BQB=0.36672;DP=2827;DP4=1390,1264,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.1458e-11;MQSB=0.983395;RPB=0.986108;SGB=61.1019;VDB=0.900513;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN-132 Single Base Substitution G-T INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1198-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN1198-S Single Base Substitution G-T INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1262-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN1262-S Single Base Substitution G-T INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1660-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN1660-S Single Base Substitution G-T INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1732-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN1732-S SNP G -> T AC=1;AN=188;BQB=0.991196;DP=2534;DP4=721,1761,6,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.59448e-09;MQSB=0.788118;RPB=0.999773;SGB=94.4119;VDB=0.741225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN2123-S SNP G -> T AC=2;AN=168;BQB=0.485241;DP=2721;DP4=931,1706,15,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.17805e-15;MQSB=0.545248;RPB=0.713799;SGB=-144.307;VDB=0.498946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN2740-S SNP G -> T AC=2;AN=200;BQB=0.849087;DP=4810;DP4=2202,2277,18,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.23178e-19;MQSB=0.716056;RPB=0.874847;SGB=155.578;VDB=0.0918131;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.6:5434705 chr06:005434705 0 W/5434705-5434705 FN3823-S SNP G -> T AC=1;AN=190;BQB=0.459928;DP=3288;DP4=1830,1329,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25614e-06;MQSB=0.337098;RPB=0.995676;SGB=67.3108;VDB=0.0842421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.6:5438128 chr06:005438128 0 W/5438128-5438128 FN2301 SNP T -> A AC=1;AN=192;BQB=0.987647;DP=5088;DP4=2346,2509,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000393082;MQB=8.67669e-07;MQSB=0.0279928;RPB=0.930662;SGB=32.6514;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.6:5438749 chr06:005438749 0 W/5438749-5438749 FN2465 SNP A -> G AC=1;AN=200;BQB=0.999206;DP=4847;DP4=2364,2205,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206313;MQB=4.01216e-08;MQSB=0.255093;RPB=0.171375;SGB=40.2696;VDB=0.437171;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N794|812|LOC_Os06g10550|protein_coding|CODING|LOC_Os06g10550.1|3|1) FN1721-S.SNP.6:5439785 chr06:005439785 0 W/5439785-5439785 FN1721-S SNP A -> G AC=2;AN=188;BQB=0.816089;DP=4159;DP4=1972,2123,24,21;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00384708;MQB=3.42529e-06;MQSB=0.00141533;RPB=0.558586;SGB=-48.7822;VDB=0.173083;EFF=INTRON(MODIFIER||||812|LOC_Os06g10550|protein_coding|CODING|LOC_Os06g10550.1|2|1) FN1536-S.SNP.6:5446741 chr06:005446741 0 W/5446741-5446741 FN1536-S Single Base Substitution T-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3631-S.SNP.6:5457328 chr06:005457328 0 W/5457328-5457328 FN3631-S SNP A -> T AC=2;AN=190;BQB=0.800812;DP=2822;DP4=1479,1131,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.22981e-11;MQSB=0.95246;RPB=0.404177;SGB=13.4344;VDB=0.321207;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.6:5459841 chr06:005459841 0 W/5459841-5459841 FN579-S Single Base Substitution C-G INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2549-S.SNP.6:5460172 chr06:005460172 0 W/5460172-5460172 FN2549-S SNP G -> T AC=1;AN=198;BQB=0.871947;DP=4005;DP4=2001,1843,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.52926e-06;MQSB=0.843632;RPB=0.99412;SGB=22.1736;VDB=0.855506;EFF=INTERGENIC(MODIFIER||||||||||1) FN-374.SNP.6:5460951 chr06:005460951 0 W/5460951-5460951 FN-374 Single Base Substitution G-A INTERGENIC HOMO SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3285-S.SNP.6:5465718 chr06:005465718 0 W/5465718-5465718 FN3285-S SNP A -> T AC=1;AN=184;BQB=0.972977;DP=2495;DP4=1118,1310,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.3468e-10;MQSB=0.82072;RPB=0.0850218;SGB=62.3078;VDB=0.424233;EFF=INTRON(MODIFIER||||735|LOC_Os06g10580|protein_coding|CODING|LOC_Os06g10580.1|7|1),INTRON(MODIFIER||||735|LOC_Os06g10580|protein_coding|CODING|LOC_Os06g10580.2|7|1) FN1446-S.SNP.6:5469111 chr06:005469111 0 W/5469111-5469111 FN1446-S Single Base Substitution C-T INTRON HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN-186.SNP.6:5476146 chr06:005476146 0 W/5476146-5476146 FN-186 Single Base Substitution G-A INTERGENIC HOMO SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3731-S.SNP.6:5482156 chr06:005482156 0 W/5482156-5482156 FN3731-S SNP C -> T AC=1;AN=190;BQB=0.959666;DP=2140;DP4=811,1245,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92345e-07;MQSB=0.990461;RPB=0.834387;SGB=44.5415;VDB=0.643457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.6:5482160 chr06:005482160 0 W/5482160-5482160 FN3731-S SNP T -> A AC=1;AN=190;BQB=0.958492;DP=2130;DP4=799,1227,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13625e-06;MQSB=0.999913;RPB=0.812238;SGB=39.9877;VDB=0.684512;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.6:5482268 chr06:005482268 0 W/5482268-5482268 FN507-S Single Base Substitution G-A INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN1478-S.SNP.6:5489616 chr06:005489616 0 W/5489616-5489616 FN1478-S Single Base Substitution C-G INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3846-S.SNP.6:5495275 chr06:005495275 0 W/5495275-5495275 FN3846-S SNP A -> G AC=2;AN=190;BQB=0.9409;DP=3125;DP4=1721,1277,20,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.27946e-16;MQSB=0.84237;RPB=0.904209;SGB=85.8548;VDB=0.786255;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.6:5495499 chr06:005495499 0 W/5495499-5495499 FN4113-S SNP C -> T AC=1;AN=182;BQB=0.981239;DP=3005;DP4=1293,1627,17,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.82352e-13;MQSB=0.932443;RPB=0.964774;SGB=93.7308;VDB=0.553219;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.6:5495712 chr06:005495712 0 W/5495712-5495712 FN490-S Single Base Substitution G-A INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN-169.SNP.6:5496827 chr06:005496827 0 W/5496827-5496827 FN-169 Single Base Substitution C-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-202.SNP.6:5496827 chr06:005496827 0 W/5496827-5496827 FN-202 Single Base Substitution C-A INTERGENIC HOMO SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3679-S.SNP.6:5496827 chr06:005496827 0 W/5496827-5496827 FN3679-S SNP C -> A AC=2;AN=190;BQB=0.252639;DP=3260;DP4=1521,1508,19,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.30917e-15;MQSB=0.294181;RPB=0.916595;SGB=124.947;VDB=0.968673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.6:5497196 chr06:005497196 0 W/5497196-5497196 FN3927-S SNP T -> A AC=2;AN=158;BQB=0.987688;DP=2200;DP4=938,1144,15,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000454545;MQB=2.33332e-19;MQSB=0.986185;RPB=0.919636;SGB=108.201;VDB=0.66863;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.6:5501385 chr06:005501385 0 W/5501385-5501385 FN319-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g10600 homeobox and START domains containing protein, putative, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2767-S.SNP.6:5508146 chr06:005508146 0 W/5508146-5508146 FN2767-S SNP T -> G AC=1;AN=198;BQB=0.35266;DP=4244;DP4=2146,1900,23,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.90551e-17;MQSB=0.368039;RPB=0.190346;SGB=38.0616;VDB=0.577185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.6:5516716 chr06:005516716 0 W/5516716-5516716 FN2423 SNP T -> C AC=1;AN=200;BQB=0.467933;DP=4475;DP4=2239,1977,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07277e-09;MQSB=0.608678;RPB=0.923846;SGB=58.2954;VDB=0.124573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.6:5518211 chr06:005518211 0 W/5518211-5518211 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.97573;DP=2369;DP4=1240,1047,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.8224e-05;MQSB=0.958905;RPB=0.78117;SGB=20.5959;VDB=0.774083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.6:5524165 chr06:005524165 0 W/5524165-5524165 FN1484-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g10620 transcription elongation factor SPT5 homolog 1, putative, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN-256.SNP.6:5533448 chr06:005533448 0 W/5533448-5533448 FN-256 Single Base Substitution T-C INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN666-S.SNP.6:5533460 chr06:005533460 0 W/5533460-5533460 FN666-S Single Base Substitution C-A INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3287-S.SNP.6:5544759 chr06:005544759 0 W/5544759-5544759 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.810447;DP=2789;DP4=1460,1225,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.05433e-07;MQSB=0.912336;RPB=0.747545;SGB=-16.2794;VDB=0.466569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.6:5555706 chr06:005555706 0 W/5555706-5555706 FN3651-S SNP C -> G AC=2;AN=190;BQB=0.98432;DP=2628;DP4=1555,968,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.33263e-11;MQSB=0.685885;RPB=0.978713;SGB=85.5263;VDB=0.790722;EFF=INTRON(MODIFIER||||226|LOC_Os06g10650|protein_coding|CODING|LOC_Os06g10650.1|2|1) FN782-S.SNP.6:5558767 chr06:005558767 0 W/5558767-5558767 FN782-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN1523-S.SNP.6:5559458 chr06:005559458 0 W/5559458-5559458 FN1523-S Single Base Substitution G-C INTERGENIC HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN2531-S.SNP.6:5562925 chr06:005562925 0 W/5562925-5562925 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.449435;DP=4183;DP4=1923,2032,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.28384e-05;MQSB=0.909766;RPB=0.99984;SGB=-15.6211;VDB=0.725469;EFF=UTR_3_PRIME(MODIFIER||95||409|LOC_Os06g10660|protein_coding|CODING|LOC_Os06g10660.1|5|1) FN1271-S.SNP.6:5566393 chr06:005566393 0 W/5566393-5566393 FN1271-S Single Base Substitution G-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2684-S.SNP.6:5567289 chr06:005567289 0 W/5567289-5567289 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.511568;DP=2171;DP4=321,1714,1,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23336e-06;MQSB=0.0261769;RPB=0.979421;SGB=29.4541;VDB=0.0222392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.6:5584285 chr06:005584285 0 W/5584285-5584285 FN1082-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g10690 PHD-finger domain containing protein, putative, expressed SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN-102.SNP.6:5586651 chr06:005586651 0 W/5586651-5586651 FN-102 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g10700 expressed protein SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN464-S.SNP.6:5591521 chr06:005591521 0 W/5591521-5591521 FN464-S Single Base Substitution C-T INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3639-S.SNP.6:5592641 chr06:005592641 0 W/5592641-5592641 FN3639-S SNP T -> C AC=1;AN=190;BQB=0.996131;DP=2227;DP4=1162,949,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.8945e-09;MQSB=0.899186;RPB=0.87338;SGB=67.3108;VDB=0.89105;EFF=INTRON(MODIFIER||||296|LOC_Os06g10710|protein_coding|CODING|LOC_Os06g10710.1|1|1) FN2387.SNP.6:5598312 chr06:005598312 0 W/5598312-5598312 FN2387 SNP G -> A AC=1;AN=192;BQB=0.109978;DP=4687;DP4=2610,1782,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.85745e-06;MQSB=0.943845;RPB=0.839755;SGB=18.6565;VDB=0.848275;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.6:5599740 chr06:005599740 0 W/5599740-5599740 FN3799-S SNP G -> A AC=2;AN=190;BQB=0.0640332;DP=2674;DP4=1287,1295,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00299177;MQB=1.26306e-09;MQSB=0.742991;RPB=0.292604;SGB=21.2038;VDB=0.578644;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.6:5601422 chr06:005601422 0 W/5601422-5601422 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.963288;DP=2879;DP4=1124,1736,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.14736e-08;MQSB=0.96459;RPB=0.952166;SGB=48.979;VDB=0.70085;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.6:5614859 chr06:005614859 0 W/5614859-5614859 FN883-S Single Base Substitution A-T INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3781-S.SNP.6:5620538 chr06:005620538 0 W/5620538-5620538 FN3781-S SNP A -> T AC=1;AN=190;BQB=0.997518;DP=2590;DP4=1315,1216,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.72721e-05;MQSB=0.980268;RPB=0.477537;SGB=26.3271;VDB=0.0378314;EFF=INTRON(MODIFIER||||209|LOC_Os06g10760|protein_coding|CODING|LOC_Os06g10760.1|1|1) FN1346-S.SNP.6:5628264 chr06:005628264 0 W/5628264-5628264 FN1346-S Single Base Substitution C-T INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3966-S.SNP.6:5629345 chr06:005629345 0 W/5629345-5629345 FN3966-S SNP T -> A AC=2;AN=168;BQB=0.893052;DP=2876;DP4=1356,1414,14,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.99684e-15;MQSB=0.999019;RPB=0.999493;SGB=86.2102;VDB=0.0436609;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.6:5639357 chr06:005639357 0 W/5639357-5639357 FN2222-S SNP G -> A AC=2;AN=190;BQB=0.0803291;DP=4864;DP4=2329,2167,29,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.09431e-25;MQSB=0.80499;RPB=0.555166;SGB=60.0507;VDB=0.131264;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G125D|368|LOC_Os06g10810|protein_coding|CODING|LOC_Os06g10810.1|2|1) FN747-S.SNP.6:5643951 chr06:005643951 0 W/5643951-5643951 FN747-S Single Base Substitution G-A INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2625-S.SNP.6:5650938 chr06:005650938 0 W/5650938-5650938 FN2625-S SNP G -> C AC=1;AN=200;BQB=0.509129;DP=4727;DP4=2111,2346,10,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0266554;MQB=0.104154;MQSB=7.98861e-07;RPB=0.287584;SGB=86.5007;VDB=0.891037;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.6:5654750 chr06:005654750 0 W/5654750-5654750 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.254906;DP=3207;DP4=1643,1450,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31068e-06;MQSB=0.777168;RPB=0.0821095;SGB=76.4186;VDB=0.168724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.6:5655679 chr06:005655679 0 W/5655679-5655679 FN1036-S Single Base Substitution A-C INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN-150.SNP.6:5656539 chr06:005656539 0 W/5656539-5656539 FN-150 Single Base Substitution A-G INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN411-S.SNP.6:5661656 chr06:005661656 0 W/5661656-5661656 FN411-S Single Base Substitution G-A INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1240-S.SNP.6:5663149 chr06:005663149 0 W/5663149-5663149 FN1240-S Single Base Substitution T-C INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3766-S.SNP.6:5666767 chr06:005666767 0 W/5666767-5666767 FN3766-S SNP T -> G AC=2;AN=190;BQB=0.733121;DP=1387;DP4=394,777,7,7;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00144196;MQB=0.000145656;MQSB=3.94315e-14;RPB=0.998616;SGB=2.55724;VDB=0.194617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Cat|N83H|285|LOC_Os06g10870|protein_coding|CODING|LOC_Os06g10870.1|1|1) FN-299.SNP.6:5672130 chr06:005672130 0 W/5672130-5672130 FN-299 Single Base Substitution T-A INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1602-S.SNP.6:5681640 chr06:005681640 0 W/5681640-5681640 FN1602-S Single Base Substitution A-T UTR_3_PRIME Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3746-S.SNP.6:5682422 chr06:005682422 0 W/5682422-5682422 FN3746-S SNP T -> A AC=1;AN=190;BQB=0.98295;DP=3427;DP4=1685,1587,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.20464e-09;MQSB=0.99932;RPB=0.690741;SGB=46.7622;VDB=0.469308;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.6:5687717 chr06:005687717 0 W/5687717-5687717 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN1358-S.SNP.6:5702720 chr06:005702720 0 W/5702720-5702720 FN1358-S Single Base Substitution T-C INTRON HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN-119.SNP.6:5707328 chr06:005707328 0 W/5707328-5707328 FN-119 Single Base Substitution A-G INTRON HOMO SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1461-S.SNP.6:5715669 chr06:005715669 0 W/5715669-5715669 FN1461-S Single Base Substitution T-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN584-S.SNP.6:5715850 chr06:005715850 0 W/5715850-5715850 FN584-S Single Base Substitution A-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1358-S.SNP.6:5716152 chr06:005716152 0 W/5716152-5716152 FN1358-S Single Base Substitution A-G INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN3890-S.SNP.6:5721392 chr06:005721392 0 W/5721392-5721392 FN3890-S SNP T -> C AC=1;AN=158;BQB=0.968157;DP=2364;DP4=1103,1111,15,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08869e-12;MQSB=0.991984;RPB=0.992614;SGB=84.6152;VDB=0.962505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.6:5723151 chr06:005723151 0 W/5723151-5723151 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.863521;DP=4666;DP4=2631,1773,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.48663e-05;MQSB=0.993498;RPB=0.410405;SGB=35.8441;VDB=0.149896;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K65|724|LOC_Os06g10960|protein_coding|CODING|LOC_Os06g10960.1|3|1) FN2475.SNP.6:5723675 chr06:005723675 0 W/5723675-5723675 FN2475 SNP G -> A AC=1;AN=200;BQB=0.589587;DP=4957;DP4=2627,2019,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20386e-05;MQSB=0.989941;RPB=0.0677417;SGB=33.0593;VDB=0.065806;EFF=INTRON(MODIFIER||||724|LOC_Os06g10960|protein_coding|CODING|LOC_Os06g10960.1|3|1) FN1622-S.SNP.6:5727061 chr06:005727061 0 W/5727061-5727061 FN1622-S Single Base Substitution G-A INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN517-S.SNP.6:5728337 chr06:005728337 0 W/5728337-5728337 FN517-S Single Base Substitution G-A INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3293-S.SNP.6:5731750 chr06:005731750 0 W/5731750-5731750 FN3293-S SNP A -> T AC=1;AN=184;BQB=0.928798;DP=2744;DP4=1271,1377,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.10072e-11;MQSB=0.915233;RPB=0.999996;SGB=71.3514;VDB=0.0724762;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.6:5731751 chr06:005731751 0 W/5731751-5731751 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.984646;DP=2733;DP4=1257,1356,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.71941e-11;MQSB=0.768986;RPB=0.99883;SGB=66.8296;VDB=0.0814763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.6:5731752 chr06:005731752 0 W/5731752-5731752 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.961283;DP=2728;DP4=1250,1346,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31316e-12;MQSB=0.902216;RPB=0.987577;SGB=56.8786;VDB=0.0233372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.6:5733028 chr06:005733028 0 W/5733028-5733028 FN2161-S SNP G -> T AC=1;AN=168;BQB=0.866071;DP=1696;DP4=853,800,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000825643;MQSB=0.982694;RPB=0.927144;SGB=21.0249;VDB=0.779918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G272C|565|LOC_Os06g10970|protein_coding|CODING|LOC_Os06g10970.1|2|1) FN2258-S.SNP.6:5743149 chr06:005743149 0 W/5743149-5743149 FN2258-S SNP G -> A AC=1;AN=190;BQB=0.244786;DP=4163;DP4=1743,2116,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02404e-07;MQSB=0.861004;RPB=0.309004;SGB=43.2083;VDB=0.645276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.6:5748349 chr06:005748349 0 W/5748349-5748349 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.833187;DP=3198;DP4=1294,1736,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69929e-10;MQSB=0.988615;RPB=0.00646751;SGB=30.8405;VDB=0.0167502;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.6:5751778 chr06:005751778 0 W/5751778-5751778 FN908-S Single Base Substitution G-A INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2462.SNP.6:5752925 chr06:005752925 0 W/5752925-5752925 FN2462 SNP A -> G AC=1;AN=200;BQB=0.918965;DP=4759;DP4=2347,2248,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210128;MQB=1.09511e-05;MQSB=0.0045;RPB=0.0417953;SGB=45.0543;VDB=0.126387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.6:5768043 chr06:005768043 0 W/5768043-5768043 FN1304-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1340-S.SNP.6:5770035 chr06:005770035 0 W/5770035-5770035 FN1340-S Single Base Substitution T-C INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3435-S.SNP.6:5774459 chr06:005774459 0 W/5774459-5774459 FN3435-S SNP T -> C AC=1;AN=184;BQB=0.999237;DP=2504;DP4=1319,1131,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.53253e-08;MQSB=0.983339;RPB=0.630589;SGB=48.7425;VDB=0.383964;EFF=INTRON(MODIFIER||||232|LOC_Os06g11020|protein_coding|CODING|LOC_Os06g11020.1|4|1) FN3368-S.SNP.6:5781018 chr06:005781018 0 W/5781018-5781018 FN3368-S SNP T -> C AC=1;AN=184;BQB=0.995486;DP=2498;DP4=1330,1083,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20961e-06;MQSB=0.880286;RPB=0.920014;SGB=39.699;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.6:5789572 chr06:005789572 0 W/5789572-5789572 FN1548-S SNP T -> C AC=1;AN=188;BQB=0.731829;DP=4188;DP4=2234,1917,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.05889e-05;MQSB=0.787304;RPB=0.999139;SGB=8.62479;VDB=0.914506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.6:5797914 chr06:005797914 0 W/5797914-5797914 FN2676-S SNP C -> T AC=2;AN=200;BQB=0.996454;DP=5304;DP4=2794,2240,30,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.44387e-31;MQSB=0.973454;RPB=0.640659;SGB=138.902;VDB=0.814137;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.6:5799752 chr06:005799752 0 W/5799752-5799752 FN3366-S SNP A -> T AC=1;AN=184;BQB=0.463712;DP=3640;DP4=1942,1518,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.35168e-06;MQSB=0.952099;RPB=0.922087;SGB=8.32411;VDB=0.320221;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.6:5806232 chr06:005806232 0 W/5806232-5806232 FN-285 Single Base Substitution G-C INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1407-S.SNP.6:5814876 chr06:005814876 0 W/5814876-5814876 FN1407-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1228-S.SNP.6:5820501 chr06:005820501 0 W/5820501-5820501 FN1228-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN876-S.SNP.6:5821752 chr06:005821752 0 W/5821752-5821752 FN876-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g11110 transposon protein, putative, unclassified, expressed SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3670-S.SNP.6:5823038 chr06:005823038 0 W/5823038-5823038 FN3670-S SNP G -> A AC=1;AN=190;BQB=0.826874;DP=2473;DP4=1411,968,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.20717e-05;MQSB=0.703112;RPB=0.874613;SGB=44.5415;VDB=0.176923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1074C|1517|LOC_Os06g11110|protein_coding|CODING|LOC_Os06g11110.1|7|1) FN_788-1-1.SNP.6:5825939 chr06:005825939 0 W/5825939-5825939 FN_788-1-1 Single Base Substitution G-A Homo LOC_Os06g11110 transposon protein, putative, unclassified, expressed SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN811-S.SNP.6:5827590 chr06:005827590 0 W/5827590-5827590 FN811-S Single Base Substitution A-G INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4311-S.SNP.6:5827843 chr06:005827843 0 W/5827843-5827843 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.938766;DP=2367;DP4=1273,1048,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0152091;MQB=0.00712385;MQSB=0.104387;RPB=0.84201;SGB=38.987;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.6:5828084 chr06:005828084 0 W/5828084-5828084 FN765-S Single Base Substitution A-T INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1212-S.SNP.6:5830808 chr06:005830808 0 W/5830808-5830808 FN1212-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1346-S.SNP.6:5831383 chr06:005831383 0 W/5831383-5831383 FN1346-S Single Base Substitution T-C INTRON HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN4300-S.SNP.6:5831919 chr06:005831919 0 W/5831919-5831919 FN4300-S SNP T -> A AC=1;AN=170;BQB=0.978276;DP=2174;DP4=1161,932,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.60409e-07;MQSB=0.999467;RPB=0.999304;SGB=24.5502;VDB=0.91494;EFF=INTRON(MODIFIER||||259|LOC_Os06g11120|protein_coding|CODING|LOC_Os06g11120.1|2|1) FN2789-S.SNP.6:5854375 chr06:005854375 0 W/5854375-5854375 FN2789-S SNP C -> T AC=1;AN=198;BQB=0.982325;DP=4028;DP4=1945,1788,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000744787;MQB=1.04501e-06;MQSB=0.925225;RPB=0.566609;SGB=40.149;VDB=0.488252;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R21|118|LOC_Os06g11160|protein_coding|CODING|LOC_Os06g11160.1|1|1) FN2211-S.SNP.6:5866506 chr06:005866506 0 W/5866506-5866506 FN2211-S SNP C -> T AC=2;AN=190;BQB=0.825043;DP=4879;DP4=2340,2210,29,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.88278e-22;MQSB=0.947891;RPB=0.891172;SGB=-47.4775;VDB=0.893392;EFF=INTRON(MODIFIER||||683|LOC_Os06g11180|protein_coding|CODING|LOC_Os06g11180.1|6|1) FN3455-S.SNP.6:5866547 chr06:005866547 0 W/5866547-5866547 FN3455-S SNP T -> C AC=2;AN=184;BQB=0.818336;DP=2224;DP4=1033,1116,8,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.79999e-08;MQSB=0.99986;RPB=0.998732;SGB=66.8296;VDB=0.318781;EFF=INTRON(MODIFIER||||683|LOC_Os06g11180|protein_coding|CODING|LOC_Os06g11180.1|6|1) FN3542-S.SNP.6:5868075 chr06:005868075 0 W/5868075-5868075 FN3542-S SNP G -> A AC=2;AN=188;BQB=0.400761;DP=2620;DP4=1315,1233,4,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.79433e-06;MQSB=0.860134;RPB=0.457635;SGB=32.441;VDB=0.295418;EFF=INTRON(MODIFIER||||683|LOC_Os06g11180|protein_coding|CODING|LOC_Os06g11180.1|2|1) FN1410-S.SNP.6:5868777 chr06:005868777 0 W/5868777-5868777 FN1410-S Single Base Substitution C-A INTRON HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN444-S.SNP.6:5876713 chr06:005876713 0 W/5876713-5876713 FN444-S Single Base Substitution C-T INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1660-S.SNP.6:5888046 chr06:005888046 0 W/5888046-5888046 FN1660-S Single Base Substitution C-T INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN_955-1.SNP.6:5888267 chr06:005888267 0 W/5888267-5888267 FN_955-1 Single Base Substitution T-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN621-S.SNP.6:5888268 chr06:005888268 0 W/5888268-5888268 FN621-S Single Base Substitution A-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN748-S.SNP.6:5892469 chr06:005892469 0 W/5892469-5892469 FN748-S Single Base Substitution A-T INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN684-S.SNP.6:5893640 chr06:005893640 0 W/5893640-5893640 FN684-S Single Base Substitution T-C INTRON HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN4024-S.SNP.6:5894682 chr06:005894682 0 W/5894682-5894682 FN4024-S SNP G -> C AC=2;AN=168;BQB=0.686119;DP=2741;DP4=1193,1430,7,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.15586e-10;MQSB=0.956712;RPB=0.786781;SGB=58.7637;VDB=0.614437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.6:5907892 chr06:005907892 0 W/5907892-5907892 FN2703-S SNP G -> A AC=1;AN=200;BQB=0.997667;DP=5164;DP4=2491,2411,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.50199e-15;MQSB=0.945829;RPB=0.847827;SGB=47.7211;VDB=0.0735238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.6:5909972 chr06:005909972 0 W/5909972-5909972 FN2648-S SNP T -> C AC=1;AN=200;BQB=0.983377;DP=5280;DP4=2477,2611,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000189394;MQB=8.09484e-17;MQSB=0.599417;RPB=0.367802;SGB=127.947;VDB=0.612568;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN-195 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1050-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN1050-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1602-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN1602-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2082-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN2082-S SNP C -> T AC=2;AN=168;BQB=0.784449;DP=2561;DP4=1030,1463,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.76579e-18;MQSB=0.999664;RPB=0.667891;SGB=-90.0367;VDB=0.332214;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D239N|378|LOC_Os06g11280|protein_coding|CODING|LOC_Os06g11280.1|2|1) FN3572-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.827015;DP=3094;DP4=1646,1366,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64202e-13;MQSB=0.957941;RPB=0.969459;SGB=117.128;VDB=0.0265055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D239N|378|LOC_Os06g11280|protein_coding|CODING|LOC_Os06g11280.1|2|1) FN3802-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN3802-S SNP C -> T AC=2;AN=190;BQB=0.998718;DP=2942;DP4=1557,1265,21,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.80061e-18;MQSB=0.998593;RPB=0.911976;SGB=144.727;VDB=0.285676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D239N|378|LOC_Os06g11280|protein_coding|CODING|LOC_Os06g11280.1|2|1) FN4051-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN4051-S SNP C -> T AC=2;AN=168;BQB=0.933523;DP=2780;DP4=1405,1239,18,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.74073e-23;MQSB=0.801076;RPB=0.627523;SGB=78.0935;VDB=0.747585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D239N|378|LOC_Os06g11280|protein_coding|CODING|LOC_Os06g11280.1|2|1) FN435-S.SNP.6:5913473 chr06:005913473 0 W/5913473-5913473 FN435-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1739-S.SNP.6:5918407 chr06:005918407 0 W/5918407-5918407 FN1739-S SNP G -> C AC=1;AN=188;BQB=0.390177;DP=2721;DP4=1111,1583,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000292325;MQSB=0.54379;RPB=0.643429;SGB=-0.634963;VDB=0.912908;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acG|T352|380|LOC_Os06g11290|protein_coding|CODING|LOC_Os06g11290.1|2|1) FN434-S.SNP.6:5933652 chr06:005933652 0 W/5933652-5933652 FN434-S Single Base Substitution G-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN-235.SNP.6:5947138 chr06:005947138 0 W/5947138-5947138 FN-235 Single Base Substitution G-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN4166-S.SNP.6:5952027 chr06:005952027 0 W/5952027-5952027 FN4166-S SNP C -> T AC=1;AN=170;BQB=0.941512;DP=2362;DP4=1102,1190,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000219062;MQSB=0.99151;RPB=0.999966;SGB=30.1021;VDB=0.801559;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.6:5955735 chr06:005955735 0 W/5955735-5955735 FN815-S Single Base Substitution G-A INTRON HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3978-S.SNP.6:5955873 chr06:005955873 0 W/5955873-5955873 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.999364;DP=2710;DP4=1082,1531,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.92083e-09;MQSB=0.978207;RPB=0.981184;SGB=65.4653;VDB=0.0671793;EFF=INTRON(MODIFIER||||199|LOC_Os06g11330|protein_coding|CODING|LOC_Os06g11330.1|4|1) FN3807-S.SNP.6:5956663 chr06:005956663 0 W/5956663-5956663 FN3807-S SNP T -> C AC=1;AN=190;BQB=0.164968;DP=2746;DP4=1528,1089,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000739011;MQSB=0.935581;RPB=0.906491;SGB=-0.550503;VDB=0.567407;EFF=INTRON(MODIFIER||||199|LOC_Os06g11330|protein_coding|CODING|LOC_Os06g11330.1|4|1) FN1015-S.SNP.6:5957860 chr06:005957860 0 W/5957860-5957860 FN1015-S Single Base Substitution G-T INTRON HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN628-S.SNP.6:5970837 chr06:005970837 0 W/5970837-5970837 FN628-S Single Base Substitution C-A INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3629-S.SNP.6:5975135 chr06:005975135 0 W/5975135-5975135 FN3629-S SNP C -> A AC=1;AN=190;BQB=0.388529;DP=2115;DP4=734,1289,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000472813;MQB=0.000133571;MQSB=0.0254249;RPB=0.504322;SGB=35.4339;VDB=0.360411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.6:5998268 chr06:005998268 0 W/5998268-5998268 FN3790-S SNP A -> G AC=1;AN=190;BQB=0.889024;DP=2678;DP4=1251,1273,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.1355e-06;MQSB=0.0194659;RPB=0.777794;SGB=39.9877;VDB=0.389245;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.6:5999667 chr06:005999667 0 W/5999667-5999667 FN-349 Single Base Substitution A-G INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2648-S.SNP.6:6002346 chr06:006002346 0 W/6002346-6002346 FN2648-S SNP T -> C AC=1;AN=200;BQB=0.998441;DP=4383;DP4=2093,2111,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.2267e-16;MQSB=0.908228;RPB=0.25161;SGB=50.3263;VDB=0.684699;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.6:6005245 chr06:006005245 0 W/6005245-6005245 FN979-S Single Base Substitution T-C INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3896-S.SNP.6:6007815 chr06:006007815 0 W/6007815-6007815 FN3896-S SNP C -> T AC=1;AN=158;BQB=0.968846;DP=2527;DP4=1264,1146,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.03211e-05;MQSB=0.978594;RPB=0.462424;SGB=29.5899;VDB=0.840462;EFF=SPLICE_SITE_REGION(LOW||||223|LOC_Os06g11400|protein_coding|CODING|LOC_Os06g11400.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K200|223|LOC_Os06g11400|protein_coding|CODING|LOC_Os06g11400.1|4|1) FN457-S.SNP.6:6009936 chr06:006009936 0 W/6009936-6009936 FN457-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g11400 expressed protein SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN4258-S.SNP.6:6011303 chr06:006011303 0 W/6011303-6011303 FN4258-S SNP T -> A AC=1;AN=170;BQB=0.792785;DP=2681;DP4=1145,1430,2,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.32763e-05;MQSB=0.999154;RPB=0.626432;SGB=43.4296;VDB=0.931386;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.6:6013802 chr06:006013802 0 W/6013802-6013802 W453-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN1276-S.SNP.6:6031996 chr06:006031996 0 W/6031996-6031996 FN1276-S Single Base Substitution G-T INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2281.SNP.6:6036332 chr06:006036332 0 W/6036332-6036332 FN2281 SNP T -> C AC=1;AN=192;BQB=0.985013;DP=4630;DP4=2323,1755,24,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.32296e-18;MQSB=0.0476442;RPB=0.729133;SGB=-43.1695;VDB=0.204881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.6:6043637 chr06:006043637 0 W/6043637-6043637 FN1332-S Single Base Substitution A-G INTRON HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2595-S.SNP.6:6065469 chr06:006065469 0 W/6065469-6065469 FN2595-S SNP C -> T AC=1;AN=198;BQB=0.384942;DP=3499;DP4=1578,1708,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.86332e-07;MQSB=0.222997;RPB=0.356906;SGB=1.3738;VDB=0.221325;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.6:6065765 chr06:006065765 0 W/6065765-6065765 FN662-S Single Base Substitution C-T INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN3365-S.SNP.6:6065967 chr06:006065967 0 W/6065967-6065967 FN3365-S SNP C -> T AC=2;AN=184;BQB=0.842947;DP=2683;DP4=1602,998,17,10;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0204994;MQB=2.84691e-05;MQSB=0.185938;RPB=0.386761;SGB=116.569;VDB=0.282536;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.6:6075060 chr06:006075060 0 W/6075060-6075060 FN_812-4-1 Single Base Substitution T-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1535-S.SNP.6:6083415 chr06:006083415 0 W/6083415-6083415 FN1535-S Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN3436-S.SNP.6:6088883 chr06:006088883 0 W/6088883-6088883 FN3436-S SNP A -> T AC=2;AN=184;BQB=0.931657;DP=2425;DP4=1151,1159,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.57828e-17;MQSB=0.999124;RPB=0.989135;SGB=130.135;VDB=0.722387;EFF=UTR_3_PRIME(MODIFIER||325||674|LOC_Os06g11500|protein_coding|CODING|LOC_Os06g11500.1|20|1) FN4143-S.SNP.6:6092620 chr06:006092620 0 W/6092620-6092620 FN4143-S SNP T -> G AC=2;AN=168;BQB=0.670415;DP=2520;DP4=1288,1098,11,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.96169e-12;MQSB=0.974952;RPB=0.63508;SGB=76.1898;VDB=0.586723;EFF=INTRON(MODIFIER||||674|LOC_Os06g11500|protein_coding|CODING|LOC_Os06g11500.1|10|1) FN2489.SNP.6:6094409 chr06:006094409 0 W/6094409-6094409 FN2489 SNP G -> A AC=1;AN=200;BQB=0.291183;DP=5012;DP4=2368,2365,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.71086e-10;MQSB=0.876491;RPB=0.471916;SGB=24.2746;VDB=0.878587;EFF=SPLICE_SITE_REGION(LOW||||674|LOC_Os06g11500|protein_coding|CODING|LOC_Os06g11500.1|7|1),INTRON(MODIFIER||||674|LOC_Os06g11500|protein_coding|CODING|LOC_Os06g11500.1|7|1) FN790-S.SNP.6:6097557 chr06:006097557 0 W/6097557-6097557 FN790-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN4084-S.SNP.6:6106065 chr06:006106065 0 W/6106065-6106065 FN4084-S SNP T -> G AC=1;AN=182;BQB=0.835029;DP=2561;DP4=1289,1227,8,1;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.84972e-05;MQSB=0.903199;RPB=0.891962;SGB=21.5845;VDB=0.664517;EFF=INTRON(MODIFIER||||715|LOC_Os06g11520|protein_coding|CODING|LOC_Os06g11520.1|7|1) FN435-S.SNP.6:6113169 chr06:006113169 0 W/6113169-6113169 FN435-S Single Base Substitution C-T INTERGENIC HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN2213-S.SNP.6:6118474 chr06:006118474 0 W/6118474-6118474 FN2213-S SNP A -> T AC=1;AN=190;BQB=0.595365;DP=4477;DP4=2260,1900,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.92733e-08;MQSB=0.946159;RPB=0.476828;SGB=53.6492;VDB=0.954136;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V490|708|LOC_Os06g11540|protein_coding|CODING|LOC_Os06g11540.1|5|1) FN4279-S.SNP.6:6123472 chr06:006123472 0 W/6123472-6123472 FN4279-S SNP C -> T AC=1;AN=170;BQB=0.855389;DP=2423;DP4=1179,1188,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00619067;MQB=0.0169898;MQSB=0.0187144;RPB=0.49914;SGB=38.3207;VDB=0.277177;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.6:6129893 chr06:006129893 0 W/6129893-6129893 FN2645-S SNP C -> T AC=2;AN=200;BQB=0.808549;DP=4447;DP4=2046,2093,23,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000224871;MQB=2.43592e-31;MQSB=0.677826;RPB=0.790061;SGB=266.102;VDB=0.326701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.6:6131257 chr06:006131257 0 W/6131257-6131257 FN1434-S Single Base Substitution T-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-16.SNP.6:6131898 chr06:006131898 0 W/6131898-6131898 FN-16 Single Base Substitution C-T INTERGENIC Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN725-S.SNP.6:6136143 chr06:006136143 0 W/6136143-6136143 FN725-S Single Base Substitution C-T INTRON HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2226-S.SNP.6:6137788 chr06:006137788 0 W/6137788-6137788 FN2226-S SNP C -> G AC=1;AN=190;BQB=0.0103582;DP=5717;DP4=2470,2958,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.262026;MQB=0.682042;MQSB=0;RPB=0.966335;SGB=-12.1142;VDB=0.212781;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.6:6140984 chr06:006140984 0 W/6140984-6140984 FN755-S Single Base Substitution G-A INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4181-S.SNP.6:6153554 chr06:006153554 0 W/6153554-6153554 FN4181-S SNP C -> T AC=1;AN=170;BQB=0.805016;DP=1969;DP4=928,984,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.11562e-08;MQSB=0.402815;RPB=0.959823;SGB=52.3148;VDB=0.948641;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.6:6156651 chr06:006156651 0 W/6156651-6156651 FN597-S Single Base Substitution A-T INTRON HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN597-S.SNP.6:6156652 chr06:006156652 0 W/6156652-6156652 FN597-S Single Base Substitution G-T INTRON HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-361.SNP.6:6168588 chr06:006168588 0 W/6168588-6168588 FN-361 Single Base Substitution T-A INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN862-S.SNP.6:6168588 chr06:006168588 0 W/6168588-6168588 FN862-S Single Base Substitution T-A INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN373-S.SNP.6:6169586 chr06:006169586 0 W/6169586-6169586 FN373-S Single Base Substitution A-G INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN911-S.SNP.6:6170456 chr06:006170456 0 W/6170456-6170456 FN911-S Single Base Substitution G-A INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN911-S.SNP.6:6170457 chr06:006170457 0 W/6170457-6170457 FN911-S Single Base Substitution C-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN1739-S.SNP.6:6172782 chr06:006172782 0 W/6172782-6172782 FN1739-S SNP T -> A AC=1;AN=188;BQB=0.0954467;DP=3873;DP4=1889,1958,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.67481e-08;MQSB=0.864956;RPB=0.190564;SGB=-37.8212;VDB=0.156801;EFF=INTRON(MODIFIER||||396|LOC_Os06g11640|protein_coding|CODING|LOC_Os06g11640.1|1|1) FN1067-S.SNP.6:6176885 chr06:006176885 0 W/6176885-6176885 FN1067-S Single Base Substitution C-A INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1552-S.SNP.6:6176983 chr06:006176983 0 W/6176983-6176983 FN1552-S SNP G -> A AC=2;AN=188;BQB=0.0749242;DP=3875;DP4=1781,2024,26,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.26403e-22;MQSB=0.982015;RPB=0.907931;SGB=2.92897;VDB=0.856309;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN-225 Single Base Substitution C-G INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-329.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN-329 Single Base Substitution C-G INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-76.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN-76 Single Base Substitution C-G INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-82.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN-82 Single Base Substitution C-G INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1423-S.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN1423-S Single Base Substitution C-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4108-S.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN4108-S SNP C -> G AC=2;AN=182;BQB=0.303819;DP=3210;DP4=1812,1288,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.13583e-12;MQSB=0.97206;RPB=0.672094;SGB=53.2744;VDB=0.823189;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN473-S Single Base Substitution C-G INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN735-S.SNP.6:6181979 chr06:006181979 0 W/6181979-6181979 FN735-S Single Base Substitution C-G INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN-126.SNP.6:6190756 chr06:006190756 0 W/6190756-6190756 FN-126 Single Base Substitution A-C INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3901-S.SNP.6:6211777 chr06:006211777 0 W/6211777-6211777 FN3901-S SNP T -> C AC=2;AN=158;BQB=0.593797;DP=2606;DP4=1261,1131,12,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.94006e-18;MQSB=0.638208;RPB=0.706982;SGB=59.3604;VDB=0.633133;EFF=INTRON(MODIFIER||||343|LOC_Os06g11730|protein_coding|CODING|LOC_Os06g11730.1|2|1) FN2278-S.SNP.6:6212550 chr06:006212550 0 W/6212550-6212550 FN2278-S SNP G -> A AC=1;AN=190;BQB=0.639465;DP=4866;DP4=2376,2081,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.03061e-08;MQSB=0.141772;RPB=0.911931;SGB=-11.5603;VDB=0.557653;EFF=INTRON(MODIFIER||||343|LOC_Os06g11730|protein_coding|CODING|LOC_Os06g11730.1|2|1) FN3519-S.SNP.6:6219203 chr06:006219203 0 W/6219203-6219203 FN3519-S SNP C -> T AC=2;AN=188;BQB=0.957612;DP=2416;DP4=1115,1243,7,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.46188e-09;MQSB=0.832636;RPB=0.528501;SGB=58.0655;VDB=0.321842;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.6:6223914 chr06:006223914 0 W/6223914-6223914 FN_N1-116-1 Single Base Substitution G-A Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN3545-S.SNP.6:6234292 chr06:006234292 0 W/6234292-6234292 FN3545-S SNP G -> A AC=1;AN=188;BQB=0.974806;DP=2553;DP4=1241,1229,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000391696;MQB=1.23395e-06;MQSB=0.963362;RPB=0.755304;SGB=25.3545;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.6:6235110 chr06:006235110 0 W/6235110-6235110 FN735-S Single Base Substitution A-C INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN1190-S.SNP.6:6248225 chr06:006248225 0 W/6248225-6248225 FN1190-S Single Base Substitution C-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2696-S.SNP.6:6250718 chr06:006250718 0 W/6250718-6250718 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.711439;DP=3954;DP4=2178,1556,8,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000252908;MQB=3.60516e-08;MQSB=1.06676e-09;RPB=0.96674;SGB=68.0801;VDB=0.345082;EFF=START_GAINED(LOW||||317|LOC_Os06g11800|protein_coding|CODING|LOC_Os06g11800.1|1|1),UTR_5_PRIME(MODIFIER||94||317|LOC_Os06g11800|protein_coding|CODING|LOC_Os06g11800.1|1|1) FN874-S.SNP.6:6255635 chr06:006255635 0 W/6255635-6255635 FN874-S Single Base Substitution C-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN874-S.SNP.6:6255636 chr06:006255636 0 W/6255636-6255636 FN874-S Single Base Substitution G-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN1570-S.SNP.6:6256093 chr06:006256093 0 W/6256093-6256093 FN1570-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3421-S.SNP.6:6264957 chr06:006264957 0 W/6264957-6264957 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.96719;DP=2782;DP4=1043,1642,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.24086e-07;MQSB=0.939904;RPB=0.423907;SGB=44.2207;VDB=0.820411;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.6:6284035 chr06:006284035 0 W/6284035-6284035 FN951-S Single Base Substitution T-C INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3064-S.SNP.6:6286294 chr06:006286294 0 W/6286294-6286294 FN3064-S SNP T -> C AC=1;AN=184;BQB=0.521051;DP=3058;DP4=1211,1673,1,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37935e-05;MQSB=0.998309;RPB=0.858612;SGB=15.7097;VDB=0.622197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.6:6286774 chr06:006286774 0 W/6286774-6286774 FN1667-S SNP G -> A AC=2;AN=188;BQB=0.202182;DP=3065;DP4=1003,1998,13,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.11956e-20;MQSB=0.868702;RPB=0.541338;SGB=-47.4121;VDB=0.223024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.6:6297141 chr06:006297141 0 W/6297141-6297141 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.782937;DP=3759;DP4=1637,1873,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.84876e-11;MQSB=0.400948;RPB=0.789074;SGB=77.2904;VDB=0.101616;EFF=INTRON(MODIFIER||||170|LOC_Os06g11850|protein_coding|CODING|LOC_Os06g11850.1|3|1) FN2665-S.SNP.6:6297149 chr06:006297149 0 W/6297149-6297149 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.329143;DP=3663;DP4=1532,1797,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89691e-12;MQSB=0.308299;RPB=0.921081;SGB=15.9106;VDB=0.387072;EFF=INTRON(MODIFIER||||170|LOC_Os06g11850|protein_coding|CODING|LOC_Os06g11850.1|3|1) FN1520-S.SNP.6:6301301 chr06:006301301 0 W/6301301-6301301 FN1520-S Single Base Substitution A-G INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3296-S.SNP.6:6312486 chr06:006312486 0 W/6312486-6312486 FN3296-S SNP A -> G AC=1;AN=184;BQB=0.742969;DP=2531;DP4=1213,1181,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000539301;MQSB=0.918863;RPB=0.992815;SGB=8.14452;VDB=0.858815;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.6:6316873 chr06:006316873 0 W/6316873-6316873 FN464-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g11880 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN4066-S.SNP.6:6318724 chr06:006318724 0 W/6318724-6318724 FN4066-S SNP C -> T AC=2;AN=168;BQB=0.927786;DP=2734;DP4=1311,1324,11,18;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0120702;MQB=0.000214801;MQSB=0.911928;RPB=0.0539744;SGB=89.641;VDB=0.0714993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S764L|1063|LOC_Os06g11880|protein_coding|CODING|LOC_Os06g11880.1|2|1) FN976-S.SNP.6:6320742 chr06:006320742 0 W/6320742-6320742 FN976-S Single Base Substitution G-T INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1535-S.SNP.6:6322916 chr06:006322916 0 W/6322916-6322916 FN1535-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os06g11890 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1280-S.SNP.6:6327598 chr06:006327598 0 W/6327598-6327598 FN1280-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-306.SNP.6:6329845 chr06:006329845 0 W/6329845-6329845 FN-306 Single Base Substitution T-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN3838-S.SNP.6:6332191 chr06:006332191 0 W/6332191-6332191 FN3838-S SNP G -> C AC=1;AN=190;BQB=0.96232;DP=2773;DP4=1604,1080,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000883372;MQSB=0.841721;RPB=0.943607;SGB=26.3271;VDB=0.9428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.6:6332625 chr06:006332625 0 W/6332625-6332625 FN3387-S SNP C -> A AC=1;AN=184;BQB=0.939571;DP=3056;DP4=1522,1457,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.70585e-09;MQSB=0.990289;RPB=0.465665;SGB=66.8296;VDB=0.0187983;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.6:6334802 chr06:006334802 0 W/6334802-6334802 FN-291 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1383-S.SNP.6:6335844 chr06:006335844 0 W/6335844-6335844 FN1383-S Single Base Substitution C-T INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3752-S.SNP.6:6336469 chr06:006336469 0 W/6336469-6336469 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.983977;DP=3030;DP4=1368,1557,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.96491e-06;MQSB=1.38238e-05;RPB=0.889334;SGB=18.552;VDB=0.341291;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.6:6340250 chr06:006340250 0 W/6340250-6340250 FN986-S Single Base Substitution C-T INTERGENIC HOMO SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1508-S.SNP.6:6341012 chr06:006341012 0 W/6341012-6341012 FN1508-S Single Base Substitution C-T INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1190-S.SNP.6:6350872 chr06:006350872 0 W/6350872-6350872 FN1190-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g11920 endonuclease/exonuclease/phosphatase family domain containing protein, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1380-S.SNP.6:6352285 chr06:006352285 0 W/6352285-6352285 FN1380-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g11920 endonuclease/exonuclease/phosphatase family domain containing protein, expressed SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN-411.SNP.6:6360577 chr06:006360577 0 W/6360577-6360577 FN-411 Single Base Substitution G-T INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2097-S.SNP.6:6367296 chr06:006367296 0 W/6367296-6367296 FN2097-S SNP G -> A AC=1;AN=168;BQB=0.0342038;DP=2322;DP4=1065,1197,20,6;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0641688;MQB=0.000125496;MQSB=1.68621e-08;RPB=0.75307;SGB=-164.05;VDB=0.195178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.6:6382052 chr06:006382052 0 W/6382052-6382052 FN2696-S SNP A -> T AC=1;AN=200;BQB=0.080557;DP=4904;DP4=2139,2332,5,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.91702e-12;MQSB=0.970167;RPB=0.95185;SGB=-102.464;VDB=0.755531;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.6:6385425 chr06:006385425 0 W/6385425-6385425 FN993-S Single Base Substitution T-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN-135.SNP.6:6393855 chr06:006393855 0 W/6393855-6393855 FN-135 Single Base Substitution G-T INTERGENIC HOMO SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN-259.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN-259 Single Base Substitution G-A INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN1118-S.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1124-S.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN1124-S Single Base Substitution G-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2494.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN2494 SNP G -> A AC=1;AN=200;BQB=0.421099;DP=5136;DP4=2401,2418,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000194704;MQB=3.90786e-13;MQSB=0.412943;RPB=0.422762;SGB=47.7211;VDB=0.59664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.860913;DP=4829;DP4=2254,2312,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.63171e-18;MQSB=0.474135;RPB=0.943508;SGB=65.9573;VDB=0.39759;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.6:6394367 chr06:006394367 0 W/6394367-6394367 FN318-S Single Base Substitution G-A INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1551-S.SNP.6:6398250 chr06:006398250 0 W/6398250-6398250 FN1551-S Single Base Substitution A-G INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN3675-S.SNP.6:6407886 chr06:006407886 0 W/6407886-6407886 FN3675-S SNP C -> T AC=2;AN=190;BQB=0.978668;DP=2770;DP4=1415,1228,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.93771e-16;MQSB=0.788556;RPB=0.962095;SGB=121.957;VDB=0.318319;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.6:6416118 chr06:006416118 0 W/6416118-6416118 FN-220 Single Base Substitution A-T INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN-220.SNP.6:6416126 chr06:006416126 0 W/6416126-6416126 FN-220 Single Base Substitution T-G INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN624-S.SNP.6:6420981 chr06:006420981 0 W/6420981-6420981 FN624-S Single Base Substitution C-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN3917-S.SNP.6:6421750 chr06:006421750 0 W/6421750-6421750 FN3917-S SNP G -> T AC=1;AN=158;BQB=0.925986;DP=2247;DP4=1054,1114,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.28879e-06;MQSB=0.768631;RPB=0.999885;SGB=33.9591;VDB=0.695961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.6:6426650 chr06:006426650 0 W/6426650-6426650 FN-105 Single Base Substitution A-C INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN1375-S.SNP.6:6430180 chr06:006430180 0 W/6430180-6430180 FN1375-S Single Base Substitution G-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2734-S.SNP.6:6441187 chr06:006441187 0 W/6441187-6441187 FN2734-S SNP T -> C AC=1;AN=200;BQB=0.999985;DP=4632;DP4=2396,1963,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.2634e-12;MQSB=0.523151;RPB=0.52079;SGB=91.1059;VDB=0.573484;EFF=INTRON(MODIFIER||||711|LOC_Os06g12030|protein_coding|CODING|LOC_Os06g12030.1|6|1),INTRON(MODIFIER||||711|LOC_Os06g12030|protein_coding|CODING|LOC_Os06g12030.2|6|1) FN-222.SNP.6:6442007 chr06:006442007 0 W/6442007-6442007 FN-222 Single Base Substitution A-T INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3791-S.SNP.6:6451638 chr06:006451638 0 W/6451638-6451638 FN3791-S SNP G -> A AC=1;AN=190;BQB=0.725775;DP=2444;DP4=1282,1087,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62829e-07;MQSB=0.918831;RPB=0.754211;SGB=36.1006;VDB=0.632065;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.6:6451998 chr06:006451998 0 W/6451998-6451998 FN704-S Single Base Substitution G-A INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN465-S.SNP.6:6458084 chr06:006458084 0 W/6458084-6458084 FN465-S Single Base Substitution G-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN943-S.SNP.6:6459697 chr06:006459697 0 W/6459697-6459697 FN943-S Single Base Substitution T-G INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN549-S.SNP.6:6460489 chr06:006460489 0 W/6460489-6460489 FN549-S Single Base Substitution G-C INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN1215-S.SNP.6:6472265 chr06:006472265 0 W/6472265-6472265 FN1215-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN-53.SNP.6:6478931 chr06:006478931 0 W/6478931-6478931 FN-53 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g12090 miro, putative, expressed SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN2661-S.SNP.6:6479071 chr06:006479071 0 W/6479071-6479071 FN2661-S SNP A -> T AC=1;AN=200;BQB=0.995996;DP=5256;DP4=2734,2274,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.65516e-12;MQSB=0.90115;RPB=0.484632;SGB=54.6902;VDB=0.215518;EFF=UTR_3_PRIME(MODIFIER||112||194|LOC_Os06g12090|protein_coding|CODING|LOC_Os06g12090.1|3|1) FN2661-S.SNP.6:6479072 chr06:006479072 0 W/6479072-6479072 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.375788;DP=5249;DP4=2737,2198,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78073e-11;MQSB=0.980065;RPB=0.596949;SGB=72.6852;VDB=0.305515;EFF=UTR_3_PRIME(MODIFIER||113||194|LOC_Os06g12090|protein_coding|CODING|LOC_Os06g12090.1|3|1) FN1086-S.SNP.6:6494224 chr06:006494224 0 W/6494224-6494224 FN1086-S Single Base Substitution A-G INTRON HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN513-S.SNP.6:6495093 chr06:006495093 0 W/6495093-6495093 FN513-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3809-S.SNP.6:6501281 chr06:006501281 0 W/6501281-6501281 FN3809-S SNP T -> C AC=2;AN=190;BQB=0.916704;DP=2746;DP4=1368,1300,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.3178e-14;MQSB=0.999627;RPB=0.796056;SGB=126.511;VDB=0.0137596;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.6:6501735 chr06:006501735 0 W/6501735-6501735 FN4140-S SNP G -> A AC=2;AN=170;BQB=0.957721;DP=2542;DP4=1303,1118,12,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.4448e-16;MQSB=0.974556;RPB=0.646046;SGB=86.5178;VDB=0.597254;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.6:6506347 chr06:006506347 0 W/6506347-6506347 FN-92 Single Base Substitution C-T INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN1067-S.SNP.6:6516659 chr06:006516659 0 W/6516659-6516659 FN1067-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1423-S.SNP.6:6523523 chr06:006523523 0 W/6523523-6523523 FN1423-S Single Base Substitution T-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2689-S.SNP.6:6530597 chr06:006530597 0 W/6530597-6530597 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.981868;DP=4678;DP4=2359,2071,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.79228e-06;MQSB=0.704548;RPB=0.742212;SGB=45.0543;VDB=0.533108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.6:6532982 chr06:006532982 0 W/6532982-6532982 FN2597-S SNP G -> A AC=2;AN=198;BQB=0.765999;DP=4577;DP4=2313,1939,28,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.20192e-30;MQSB=0.899294;RPB=0.979199;SGB=194.739;VDB=0.489958;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.6:6540073 chr06:006540073 0 W/6540073-6540073 W416-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3412-S.SNP.6:6541902 chr06:006541902 0 W/6541902-6541902 FN3412-S SNP T -> C AC=2;AN=184;BQB=0.974981;DP=2649;DP4=1260,1281,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.45916e-10;MQSB=0.987965;RPB=0.995085;SGB=84.9167;VDB=0.1643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3836-S.SNP.6:6544756 chr06:006544756 0 W/6544756-6544756 FN3836-S SNP T -> A AC=1;AN=190;BQB=0.499243;DP=2732;DP4=1340,1288,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08536e-06;MQSB=0.627611;RPB=0.999477;SGB=71.8647;VDB=0.00464494;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.6:6547491 chr06:006547491 0 W/6547491-6547491 FN475-S Single Base Substitution G-A INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2140-S.SNP.6:6548286 chr06:006548286 0 W/6548286-6548286 FN2140-S SNP T -> C AC=1;AN=168;BQB=0.0973068;DP=3988;DP4=1808,2106,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.747e-10;MQSB=0.995172;RPB=0.999488;SGB=8.48315;VDB=0.0597136;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.6:6551849 chr06:006551849 0 W/6551849-6551849 FN-394 Single Base Substitution G-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3871-S.SNP.6:6555233 chr06:006555233 0 W/6555233-6555233 FN3871-S SNP T -> A AC=1;AN=158;BQB=0.992012;DP=2432;DP4=1075,1275,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.27506e-07;MQSB=0.796958;RPB=0.277375;SGB=37.4429;VDB=0.529692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.6:6556215 chr06:006556215 0 W/6556215-6556215 FN1732-S SNP T -> A AC=1;AN=188;BQB=0.661587;DP=3858;DP4=1281,2538,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75091e-10;MQSB=0.717295;RPB=0.13817;SGB=-39.6481;VDB=0.358695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.6:6556301 chr06:006556301 0 W/6556301-6556301 FN2353 SNP T -> A AC=1;AN=192;BQB=0.0205694;DP=5561;DP4=2784,2146,4,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000179824;MQB=1.00379e-08;MQSB=0.779079;RPB=0.164915;SGB=-135.307;VDB=0.941387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.6:6561574 chr06:006561574 0 W/6561574-6561574 FN2142-S SNP C -> G AC=1;AN=168;BQB=0.138573;DP=4046;DP4=1762,2248,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.49579e-10;MQSB=0.85718;RPB=0.630091;SGB=-41.7816;VDB=0.276857;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V32L|193|LOC_Os06g12220|protein_coding|CODING|LOC_Os06g12220.1|3|1) FN1274-S.SNP.6:6566273 chr06:006566273 0 W/6566273-6566273 FN1274-S Single Base Substitution C-T INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN-72.SNP.6:6574174 chr06:006574174 0 W/6574174-6574174 FN-72 Single Base Substitution T-G INTERGENIC HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2398.SNP.6:6575138 chr06:006575138 0 W/6575138-6575138 FN2398 SNP A -> C AC=1;AN=200;BQB=0.713102;DP=4768;DP4=2186,2257,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.2753e-08;MQSB=0.940948;RPB=0.808915;SGB=47.4799;VDB=0.0925862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.6:6580211 chr06:006580211 0 W/6580211-6580211 FN1451-S Single Base Substitution G-T INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3330-S.SNP.6:6602279 chr06:006602279 0 W/6602279-6602279 FN3330-S SNP G -> A AC=2;AN=184;BQB=0.425704;DP=3269;DP4=1768,1397,11,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.41803e-16;MQSB=0.558333;RPB=0.0471405;SGB=81.5311;VDB=0.83263;EFF=UTR_5_PRIME(MODIFIER||233||704|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.1|1|1),UTR_5_PRIME(MODIFIER||233||704|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.2|1|1),UTR_5_PRIME(MODIFIER||233||577|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.3|1|1) FN3330-S.SNP.6:6602280 chr06:006602280 0 W/6602280-6602280 FN3330-S SNP C -> A AC=2;AN=184;BQB=0.192378;DP=3278;DP4=1784,1394,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.21926e-15;MQSB=0.725844;RPB=0.152829;SGB=98.4821;VDB=0.953138;EFF=UTR_5_PRIME(MODIFIER||234||704|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.1|1|1),UTR_5_PRIME(MODIFIER||234||704|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.2|1|1),UTR_5_PRIME(MODIFIER||234||577|LOC_Os06g12260|protein_coding|CODING|LOC_Os06g12260.3|1|1) FN480-S.SNP.6:6608276 chr06:006608276 0 W/6608276-6608276 FN480-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g12280 glycosyl transferase 8 domain containing protein, putative, expressed SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1648-S.SNP.6:6612949 chr06:006612949 0 W/6612949-6612949 FN1648-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g12290 glutathione S-transferase GSTU6, putative, expressed SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN4032-S.SNP.6:6615919 chr06:006615919 0 W/6615919-6615919 FN4032-S SNP T -> C AC=2;AN=168;BQB=0.818873;DP=2631;DP4=1122,1345,21,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.7635e-18;MQSB=0.911847;RPB=0.860402;SGB=105.089;VDB=0.556767;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.6:6626332 chr06:006626332 0 W/6626332-6626332 FN1728-S SNP C -> T AC=1;AN=188;BQB=0.0459467;DP=3098;DP4=1440,1629,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00651073;MQSB=0.968696;RPB=0.139455;SGB=-51.7056;VDB=0.401987;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.6:6627875 chr06:006627875 0 W/6627875-6627875 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.901105;DP=2946;DP4=1335,1523,7,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14813e-11;MQSB=0.977629;RPB=0.997696;SGB=60.2037;VDB=0.938229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.6:6628751 chr06:006628751 0 W/6628751-6628751 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.958727;DP=4858;DP4=2329,2297,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9931e-07;MQSB=0.947345;RPB=0.974425;SGB=16.4591;VDB=0.804268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.6:6632098 chr06:006632098 0 W/6632098-6632098 FN2322 SNP A -> C AC=2;AN=192;BQB=0.98818;DP=4999;DP4=2536,2160,18,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78074e-21;MQSB=0.971313;RPB=0.518251;SGB=114.631;VDB=0.247011;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.6:6635393 chr06:006635393 0 W/6635393-6635393 FN-384 Single Base Substitution C-T INTERGENIC HOMO SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN941-S.SNP.6:6635393 chr06:006635393 0 W/6635393-6635393 FN941-S Single Base Substitution C-T INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2771-S.SNP.6:6647001 chr06:006647001 0 W/6647001-6647001 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.4167;DP=4221;DP4=1975,1887,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00639659;MQB=2.91331e-09;MQSB=0.989136;RPB=0.683842;SGB=37.1297;VDB=0.714389;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.6:6658481 chr06:006658481 0 W/6658481-6658481 FN2477 SNP G -> A AC=1;AN=200;BQB=0.992106;DP=5099;DP4=2605,2165,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45636e-13;MQSB=0.768333;RPB=0.654878;SGB=100.316;VDB=0.640387;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.6:6660754 chr06:006660754 0 W/6660754-6660754 FN323-S Single Base Substitution C-G INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3756-S.SNP.6:6660754 chr06:006660754 0 W/6660754-6660754 FN3756-S SNP C -> G AC=2;AN=190;BQB=0.879031;DP=2455;DP4=1237,1108,13,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.0704e-16;MQSB=0.995604;RPB=0.990136;SGB=144.727;VDB=0.201564;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.6:6662304 chr06:006662304 0 W/6662304-6662304 FN885-S Single Base Substitution C-T INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN1748-S.SNP.6:6669648 chr06:006669648 0 W/6669648-6669648 FN1748-S SNP G -> A AC=1;AN=188;BQB=0.44634;DP=3946;DP4=1992,1916,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.00321e-08;MQSB=0.999696;RPB=0.996832;SGB=-86.4405;VDB=0.140852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.6:6682143 chr06:006682143 0 W/6682143-6682143 FN2684-S SNP G -> T AC=1;AN=200;BQB=0.218834;DP=5134;DP4=2515,2194,15,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27578e-18;MQSB=0.982327;RPB=0.984111;SGB=78.9831;VDB=0.600064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.6:6692348 chr06:006692348 0 W/6692348-6692348 FN2577-S SNP G -> C AC=1;AN=198;BQB=0.647391;DP=3839;DP4=1877,1705,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.51976e-07;MQSB=0.970616;RPB=0.13989;SGB=18.9639;VDB=0.60582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P277R|507|LOC_Os06g12350|protein_coding|CODING|LOC_Os06g12350.1|3|1) FN2529-S.SNP.6:6695513 chr06:006695513 0 W/6695513-6695513 FN2529-S SNP C -> A AC=1;AN=198;BQB=0.94313;DP=4202;DP4=2166,1727,12,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.56256e-08;MQSB=0.80113;RPB=0.989141;SGB=-54.2061;VDB=0.0602723;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.6:6696161 chr06:006696161 0 W/6696161-6696161 FN-245 Single Base Substitution A-T INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3868-S.SNP.6:6697421 chr06:006697421 0 W/6697421-6697421 FN3868-S SNP T -> C AC=2;AN=158;BQB=0.999527;DP=2209;DP4=1089,1011,8,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.37305e-08;MQSB=0.878728;RPB=0.229185;SGB=40.8124;VDB=0.204288;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A252|921|LOC_Os06g12360|protein_coding|CODING|LOC_Os06g12360.1|1|1) FN3579-S.SNP.6:6702465 chr06:006702465 0 W/6702465-6702465 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.953448;DP=2921;DP4=1448,1335,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.00845683;MQSB=0.993692;RPB=0.992553;SGB=28.8977;VDB=0.852963;EFF=INTRON(MODIFIER||||681|LOC_Os06g12370|protein_coding|CODING|LOC_Os06g12370.1|1|1) FN1737-S.SNP.6:6708126 chr06:006708126 0 W/6708126-6708126 FN1737-S SNP A -> T AC=1;AN=188;BQB=0.949692;DP=3746;DP4=1732,1977,7,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.32346e-11;MQSB=0.758152;RPB=0.999267;SGB=-39.1914;VDB=0.408479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.6:6712706 chr06:006712706 0 W/6712706-6712706 FN1703-S SNP C -> A AC=2;AN=188;BQB=0.179519;DP=2038;DP4=822,1133,5,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.28568e-05;MQSB=0.939571;RPB=0.944876;SGB=-56.0757;VDB=0.760113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R77S|247|LOC_Os06g12380|protein_coding|CODING|LOC_Os06g12380.1|1|1) FN3916-S.SNP.6:6734297 chr06:006734297 0 W/6734297-6734297 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.742384;DP=2087;DP4=836,1180,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08829e-06;MQSB=0.99997;RPB=0.924;SGB=19.0798;VDB=0.973237;EFF=UTR_3_PRIME(MODIFIER||414||792|LOC_Os06g12400|protein_coding|CODING|LOC_Os06g12400.1|9|1) FN2211-S.SNP.6:6734561 chr06:006734561 0 W/6734561-6734561 FN2211-S SNP A -> G AC=1;AN=190;BQB=0.998954;DP=3758;DP4=2044,1509,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81763e-10;MQSB=0.644303;RPB=0.931222;SGB=50.3161;VDB=0.105478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.6:6738459 chr06:006738459 0 W/6738459-6738459 FN3508-S SNP G -> A AC=1;AN=188;BQB=0.96723;DP=4334;DP4=1711,2521,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.56097e-08;MQSB=0.0128095;RPB=0.998917;SGB=46.6141;VDB=0.0960125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.6:6746430 chr06:006746430 0 W/6746430-6746430 FN2249-S SNP G -> A AC=2;AN=190;BQB=0.341583;DP=5050;DP4=2212,2453,20,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00019802;MQB=4.34091e-23;MQSB=0.489425;RPB=0.596422;SGB=-46.5853;VDB=0.514004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.6:6756353 chr06:006756353 0 W/6756353-6756353 FN2447 SNP T -> C AC=1;AN=200;BQB=0.9535;DP=4888;DP4=2524,2083,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.29785e-07;MQSB=0.998038;RPB=0.984927;SGB=36.6644;VDB=0.0950632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.6:6775339 chr06:006775339 0 W/6775339-6775339 FN3506-S SNP G -> A AC=1;AN=188;BQB=0.785402;DP=3020;DP4=1369,1562,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000404212;MQSB=0.00315214;RPB=0.682145;SGB=28.8977;VDB=0.688637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-22.SNP.6:6784935 chr06:006784935 0 W/6784935-6784935 FN-22 Single Base Substitution G-T INTERGENIC Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1520-S.SNP.6:6784935 chr06:006784935 0 W/6784935-6784935 FN1520-S Single Base Substitution G-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2223-S.SNP.6:6784935 chr06:006784935 0 W/6784935-6784935 FN2223-S SNP G -> T AC=2;AN=190;BQB=0.861741;DP=4968;DP4=2205,2399,14,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.7633e-22;MQSB=0.938036;RPB=0.399424;SGB=41.4042;VDB=0.250849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.6:6784935 chr06:006784935 0 W/6784935-6784935 FN3358-S SNP G -> T AC=2;AN=184;BQB=0.994438;DP=2881;DP4=1286,1460,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.41173e-15;MQSB=0.994532;RPB=0.94611;SGB=81.5311;VDB=0.847522;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.6:6791216 chr06:006791216 0 W/6791216-6791216 FN-132 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g12510 pentatricopeptide, putative, expressed SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN-327.SNP.6:6801481 chr06:006801481 0 W/6801481-6801481 FN-327 Single Base Substitution A-C INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN-245.SNP.6:6803472 chr06:006803472 0 W/6803472-6803472 FN-245 Single Base Substitution A-G INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN846-S.SNP.6:6812272 chr06:006812272 0 W/6812272-6812272 FN846-S Single Base Substitution G-A INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2422.SNP.6:6813903 chr06:006813903 0 W/6813903-6813903 FN2422 SNP C -> T AC=1;AN=200;BQB=0.0246241;DP=4633;DP4=2228,2094,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000647529;MQB=2.82937e-10;MQSB=0.0488388;RPB=0.0338023;SGB=45.1159;VDB=0.606786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:6824316 chr06:006824316 0 W/6824316-6824316 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.968135;DP=5040;DP4=2072,2660,22,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29639e-21;MQSB=0.963591;RPB=0.624665;SGB=115.978;VDB=0.460013;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1011I|1078|LOC_Os06g12590|protein_coding|CODING|LOC_Os06g12590.1|12|1) FN2657-S.SNP.6:6824319 chr06:006824319 0 W/6824319-6824319 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.841567;DP=5059;DP4=2082,2723,21,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60712e-21;MQSB=0.91243;RPB=0.323356;SGB=119.583;VDB=0.490998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1010I|1078|LOC_Os06g12590|protein_coding|CODING|LOC_Os06g12590.1|12|1) W721-2-1.SNP.6:6829450 chr06:006829450 0 W/6829450-6829450 W721-2-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g12590 protein kinase, putative, expressed SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN1036-S.SNP.6:6831492 chr06:006831492 0 W/6831492-6831492 FN1036-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g12590 protein kinase, putative, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN2335.SNP.6:6833709 chr06:006833709 0 W/6833709-6833709 FN2335 SNP T -> G AC=2;AN=192;BQB=0.998986;DP=4702;DP4=1993,2268,20,43;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.81163e-30;MQSB=0.497222;RPB=0.999791;SGB=146.874;VDB=0.485017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.6:6834121 chr06:006834121 0 W/6834121-6834121 FN2667-S SNP C -> T AC=2;AN=200;BQB=0.708082;DP=5303;DP4=2443,2557,22,17;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=2.47625e-19;MQSB=0.809026;RPB=0.398479;SGB=130.399;VDB=0.156284;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.6:6835766 chr06:006835766 0 W/6835766-6835766 FN759-S Single Base Substitution A-T INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2157-S.SNP.6:6851803 chr06:006851803 0 W/6851803-6851803 FN2157-S SNP C -> G AC=1;AN=168;BQB=0.271457;DP=3319;DP4=1555,1729,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.4745e-09;MQSB=0.986274;RPB=0.966253;SGB=5.62151;VDB=0.490796;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.6:6851913 chr06:006851913 0 W/6851913-6851913 FN-232 Single Base Substitution A-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-273.SNP.6:6873852 chr06:006873852 0 W/6873852-6873852 FN-273 Single Base Substitution C-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3775-S.SNP.6:6882286 chr06:006882286 0 W/6882286-6882286 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.999859;DP=2720;DP4=1428,1202,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13797e-15;MQSB=0.997178;RPB=0.156794;SGB=108.296;VDB=0.454065;EFF=INTERGENIC(MODIFIER||||||||||1) FN_841-7-2.SNP.6:6896038 chr06:006896038 0 W/6896038-6896038 FN_841-7-2 Single Base Substitution A-T Homo SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2442.SNP.6:6896498 chr06:006896498 0 W/6896498-6896498 FN2442 SNP C -> G AC=1;AN=200;BQB=0.618568;DP=5060;DP4=2347,2315,10,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.0338e-11;MQSB=0.256414;RPB=0.980188;SGB=76.3213;VDB=0.176715;EFF=INTRON(MODIFIER||||678|LOC_Os06g12640|protein_coding|CODING|LOC_Os06g12640.1|1|1) FN2532-S.SNP.6:6896498 chr06:006896498 0 W/6896498-6896498 FN2532-S SNP C -> G AC=2;AN=198;BQB=0.802557;DP=4761;DP4=2365,2027,33,21;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.3504e-27;MQSB=0.136933;RPB=0.100871;SGB=8.18366;VDB=0.0448261;EFF=INTRON(MODIFIER||||678|LOC_Os06g12640|protein_coding|CODING|LOC_Os06g12640.1|1|1) FN3776-S.SNP.6:6896791 chr06:006896791 0 W/6896791-6896791 FN3776-S SNP G -> A AC=2;AN=190;BQB=0.820226;DP=2793;DP4=1241,1418,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33323e-13;MQSB=0.80907;RPB=0.810718;SGB=44.0907;VDB=0.568843;EFF=INTRON(MODIFIER||||678|LOC_Os06g12640|protein_coding|CODING|LOC_Os06g12640.1|1|1) FN740-S.SNP.6:6899056 chr06:006899056 0 W/6899056-6899056 FN740-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g12640 transposon protein, putative, unclassified, expressed SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3309-S.SNP.6:6900333 chr06:006900333 0 W/6900333-6900333 FN3309-S SNP T -> A AC=1;AN=184;BQB=0.995873;DP=3061;DP4=1562,1342,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.9233e-08;MQSB=0.947557;RPB=0.452922;SGB=39.2697;VDB=0.423561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F611Y|678|LOC_Os06g12640|protein_coding|CODING|LOC_Os06g12640.1|8|1) FN470-S.SNP.6:6900492 chr06:006900492 0 W/6900492-6900492 FN470-S Single Base Substitution A-T INTRON HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2790-S.SNP.6:6908640 chr06:006908640 0 W/6908640-6908640 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.984593;DP=4075;DP4=1868,1885,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.028e-08;MQSB=0.937944;RPB=0.939189;SGB=24.1541;VDB=0.259502;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.6:6910923 chr06:006910923 0 W/6910923-6910923 FN561-S Single Base Substitution T-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN1667-S.SNP.6:6913132 chr06:006913132 0 W/6913132-6913132 FN1667-S SNP G -> A AC=2;AN=188;BQB=0.532854;DP=2121;DP4=489,1569,13,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.23479e-17;MQSB=0.529592;RPB=0.972127;SGB=22.5404;VDB=0.586366;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.6:6918182 chr06:006918182 0 W/6918182-6918182 FN1460-S Single Base Substitution G-A INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2653-S.SNP.6:6918524 chr06:006918524 0 W/6918524-6918524 FN2653-S SNP G -> T AC=1;AN=200;BQB=0.462584;DP=4652;DP4=1998,2290,13,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00795357;MQB=2.6415e-10;MQSB=0.0839974;RPB=0.994336;SGB=100.316;VDB=0.715206;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.6:6933482 chr06:006933482 0 W/6933482-6933482 FN806-S Single Base Substitution T-A INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3697-S.SNP.6:6935866 chr06:006935866 0 W/6935866-6935866 FN3697-S SNP T -> G AC=2;AN=190;BQB=0.719558;DP=2930;DP4=1168,1599,18,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.63582e-17;MQSB=0.992307;RPB=0.991118;SGB=-6.57546;VDB=0.276843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.6:6937834 chr06:006937834 0 W/6937834-6937834 FN2703-S SNP G -> T AC=2;AN=200;BQB=0.998456;DP=5070;DP4=2653,2069,31,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.21326e-32;MQSB=0.996555;RPB=0.910497;SGB=233.866;VDB=0.632838;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.6:6940674 chr06:006940674 0 W/6940674-6940674 FN881-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2575-S.SNP.6:6945200 chr06:006945200 0 W/6945200-6945200 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.967064;DP=4218;DP4=1992,2006,22,15;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0165955;MQB=0.00329585;MQSB=0.00508738;RPB=0.54079;SGB=81.2467;VDB=0.0732564;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E729K|783|LOC_Os06g12720|protein_coding|CODING|LOC_Os06g12720.1|7|1) FN3815-S.SNP.6:6947743 chr06:006947743 0 W/6947743-6947743 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.984497;DP=2839;DP4=1426,1324,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10161e-08;MQSB=0.996024;RPB=0.433024;SGB=58.2031;VDB=0.23502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P26T|783|LOC_Os06g12720|protein_coding|CODING|LOC_Os06g12720.1|1|1) FN3815-S.SNP.6:6954226 chr06:006954226 0 W/6954226-6954226 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.881994;DP=1932;DP4=1017,753,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.40563e-05;MQSB=0.965567;RPB=0.997988;SGB=26.3271;VDB=0.848578;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A263E|371|LOC_Os06g12740|protein_coding|CODING|LOC_Os06g12740.1|7|1) FN-124.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN-124 Single Base Substitution C-T INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN-220.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN-220 Single Base Substitution C-T INTERGENIC HOMO SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN-345.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN-345 Single Base Substitution C-T INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN1093-S Single Base Substitution C-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2279-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.0870681;DP=4796;DP4=2477,2004,33,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.90089e-32;MQSB=0.906638;RPB=0.93039;SGB=11.1486;VDB=0.52716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN2486 SNP C -> T AC=2;AN=200;BQB=0.231899;DP=4493;DP4=2342,1889,33,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.30498e-34;MQSB=0.996019;RPB=0.522299;SGB=279.918;VDB=0.944685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN3345-S SNP C -> T AC=2;AN=184;BQB=0.837921;DP=2952;DP4=1354,1510,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.38505e-13;MQSB=0.456737;RPB=0.210124;SGB=107.526;VDB=0.506391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.92716;DP=2468;DP4=1333,1028,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12464e-16;MQSB=0.577205;RPB=0.274344;SGB=126.511;VDB=0.575016;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.998902;DP=2882;DP4=1436,1366,9,25;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.49231e-19;MQSB=0.496664;RPB=0.72329;SGB=147.861;VDB=0.178648;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN509-S Single Base Substitution C-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN627-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN627-S Single Base Substitution C-T INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN836-S.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN836-S Single Base Substitution C-T INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN_812-4-1.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 FN_812-4-1 Single Base Substitution C-T HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.6:6959951 chr06:006959951 0 W/6959951-6959951 W453-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN466-S.SNP.6:6963506 chr06:006963506 0 W/6963506-6963506 FN466-S Single Base Substitution T-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN2295.SNP.6:6963894 chr06:006963894 0 W/6963894-6963894 FN2295 SNP A -> G AC=1;AN=192;BQB=0.705809;DP=4619;DP4=2272,2050,15,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.57573e-13;MQSB=0.819052;RPB=0.968062;SGB=94.8539;VDB=0.291905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F23L|72|LOC_Os06g12760|protein_coding|CODING|LOC_Os06g12760.1|1|1) FN956-S.SNP.6:6964454 chr06:006964454 0 W/6964454-6964454 FN956-S Single Base Substitution C-A INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-118.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN-118 Single Base Substitution G-A INTERGENIC HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-91.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN-91 Single Base Substitution G-A INTERGENIC HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN1219-S.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN1219-S Single Base Substitution G-A INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1516-S.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN1516-S Single Base Substitution G-A INTERGENIC Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3552-S.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN3552-S SNP G -> A AC=2;AN=188;BQB=0.963558;DP=2828;DP4=1625,1117,23,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.2209e-19;MQSB=0.71177;RPB=0.725961;SGB=162.561;VDB=0.764978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN3981-S SNP G -> A AC=2;AN=168;BQB=0.771095;DP=2609;DP4=1505,1000,10,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.01752e-08;MQSB=0.986864;RPB=0.991105;SGB=27.0464;VDB=0.844756;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.6:6968587 chr06:006968587 0 W/6968587-6968587 FN4141-S SNP G -> A AC=2;AN=170;BQB=0.589351;DP=2544;DP4=1472,973,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.59719e-10;MQSB=0.787916;RPB=0.28373;SGB=87.856;VDB=0.522924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.6:6973100 chr06:006973100 0 W/6973100-6973100 FN2771-S SNP T -> A AC=1;AN=198;BQB=0.773163;DP=4664;DP4=2182,2276,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.80578e-13;MQSB=0.956733;RPB=0.197447;SGB=44.9151;VDB=0.157244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.6:6978784 chr06:006978784 0 W/6978784-6978784 FN3698-S SNP A -> T AC=1;AN=190;BQB=0.581545;DP=3133;DP4=1609,1451,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31825e-07;MQSB=0.988834;RPB=0.950455;SGB=62.7569;VDB=0.559804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.6:6987677 chr06:006987677 0 W/6987677-6987677 FN-247 Single Base Substitution A-G INTERGENIC HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN984-S.SNP.6:6988726 chr06:006988726 0 W/6988726-6988726 FN984-S Single Base Substitution A-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN715-S.SNP.6:6995170 chr06:006995170 0 W/6995170-6995170 FN715-S Single Base Substitution G-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN3443-S.SNP.6:6999484 chr06:006999484 0 W/6999484-6999484 FN3443-S SNP G -> A AC=1;AN=184;BQB=0.262691;DP=2648;DP4=1427,1108,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000377644;MQB=0.00256259;MQSB=0.000913637;RPB=0.522712;SGB=28.3187;VDB=0.112983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.6:7001240 chr06:007001240 0 W/7001240-7001240 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.990621;DP=3952;DP4=1872,1985,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.81664e-11;MQSB=0.79839;RPB=0.989822;SGB=56.8786;VDB=0.497758;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T195|462|LOC_Os06g12810|protein_coding|CODING|LOC_Os06g12810.1|2|1) FN1480-S.SNP.6:7007712 chr06:007007712 0 W/7007712-7007712 FN1480-S Single Base Substitution G-A INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN3466-S.SNP.6:7009154 chr06:007009154 0 W/7009154-7009154 FN3466-S SNP C -> G AC=1;AN=184;BQB=0.997435;DP=2810;DP4=1071,1602,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.67501e-09;MQSB=0.983868;RPB=0.19217;SGB=57.786;VDB=0.142558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.6:7009155 chr06:007009155 0 W/7009155-7009155 FN3466-S SNP C -> T AC=1;AN=184;BQB=0.915493;DP=2830;DP4=1090,1597,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68956e-09;MQSB=0.998382;RPB=0.232886;SGB=57.786;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.6:7012660 chr06:007012660 0 W/7012660-7012660 FN2245-S SNP C -> A AC=1;AN=190;BQB=0.620946;DP=5288;DP4=2620,2211,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01634e-05;MQSB=0.99694;RPB=0.988211;SGB=-17.0991;VDB=0.445609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.6:7017450 chr06:007017450 0 W/7017450-7017450 FN1380-S Single Base Substitution A-G INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN4002-S.SNP.6:7019727 chr06:007019727 0 W/7019727-7019727 FN4002-S SNP A -> G AC=1;AN=168;BQB=0.900757;DP=2636;DP4=1234,1258,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93881e-09;MQSB=0.934781;RPB=0.942331;SGB=48.4712;VDB=0.747647;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.6:7024619 chr06:007024619 0 W/7024619-7024619 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3630-S.SNP.6:7027638 chr06:007027638 0 W/7027638-7027638 FN3630-S SNP T -> A AC=1;AN=190;BQB=0.881279;DP=2589;DP4=1417,958,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000772499;MQB=0.232645;MQSB=0.907968;RPB=0.961374;SGB=26.3271;VDB=0.0219768;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.6:7029790 chr06:007029790 0 W/7029790-7029790 FN-219 Single Base Substitution A-G INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN2448.SNP.6:7040310 chr06:007040310 0 W/7040310-7040310 FN2448 SNP G -> A AC=2;AN=200;BQB=0.948897;DP=5140;DP4=2264,2524,17,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.97884e-23;MQSB=0.992156;RPB=0.33261;SGB=89.4038;VDB=0.329649;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.6:7043590 chr06:007043590 0 W/7043590-7043590 FN904-S Single Base Substitution C-T INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN-248.SNP.6:7043733 chr06:007043733 0 W/7043733-7043733 FN-248 Single Base Substitution C-A UTR_3_PRIME HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN1133-S.SNP.6:7044364 chr06:007044364 0 W/7044364-7044364 FN1133-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1133-S.SNP.6:7044365 chr06:007044365 0 W/7044365-7044365 FN1133-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g12870 leaf senescence related protein, putative, expressed SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1440-S.SNP.6:7044408 chr06:007044408 0 W/7044408-7044408 FN1440-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g12870 leaf senescence related protein, putative, expressed SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN554-S.SNP.6:7046354 chr06:007046354 0 W/7046354-7046354 FN554-S Single Base Substitution C-T INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN509-S.SNP.6:7046653 chr06:007046653 0 W/7046653-7046653 FN509-S Single Base Substitution G-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN1645-S.SNP.6:7046805 chr06:007046805 0 W/7046805-7046805 FN1645-S Single Base Substitution T-A INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1645-S.SNP.6:7046806 chr06:007046806 0 W/7046806-7046806 FN1645-S Single Base Substitution T-A INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1665-S.SNP.6:7050124 chr06:007050124 0 W/7050124-7050124 FN1665-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1299-S.SNP.6:7058476 chr06:007058476 0 W/7058476-7058476 FN1299-S Single Base Substitution T-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN973-S.SNP.6:7058595 chr06:007058595 0 W/7058595-7058595 FN973-S Single Base Substitution C-T INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN909-S.SNP.6:7064608 chr06:007064608 0 W/7064608-7064608 FN909-S Single Base Substitution C-T INTRON HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2682-S.SNP.6:7076495 chr06:007076495 0 W/7076495-7076495 FN2682-S SNP A -> G AC=1;AN=200;BQB=0.998608;DP=4745;DP4=2255,2242,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.38783e-05;MQSB=0.742984;RPB=0.987499;SGB=31.2392;VDB=0.782768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.6:7088558 chr06:007088558 0 W/7088558-7088558 FN2212-S SNP G -> A AC=1;AN=190;BQB=0.918541;DP=4121;DP4=2089,1726,24,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.901e-18;MQSB=0.420636;RPB=0.752026;SGB=114.286;VDB=0.106059;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.6:7091040 chr06:007091040 0 W/7091040-7091040 FN4093-S SNP T -> A AC=1;AN=182;BQB=0.909603;DP=3093;DP4=1331,1685,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.17344e-07;MQSB=0.999979;RPB=0.94886;SGB=44.1115;VDB=0.171769;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.6:7092155 chr06:007092155 0 W/7092155-7092155 FN1642-S Single Base Substitution A-T INTERGENIC Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. W577-3-1.SNP.6:7098783 chr06:007098783 0 W/7098783-7098783 W577-3-1 Single Base Substitution C-T INTRON HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3554-S.SNP.6:7098928 chr06:007098928 0 W/7098928-7098928 FN3554-S SNP T -> C AC=2;AN=188;BQB=0.980087;DP=3203;DP4=1484,1605,12,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.94753e-17;MQSB=0.940061;RPB=0.981504;SGB=130.758;VDB=0.773894;EFF=INTRON(MODIFIER||||531|LOC_Os06g12970|protein_coding|CODING|LOC_Os06g12970.1|2|1) FN3859-S.SNP.6:7113138 chr06:007113138 0 W/7113138-7113138 FN3859-S SNP C -> A AC=1;AN=158;BQB=0.624398;DP=1911;DP4=1083,718,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.41731e-06;MQSB=0.261119;RPB=0.592591;SGB=38.3284;VDB=0.755657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.6:7126310 chr06:007126310 0 W/7126310-7126310 FN4110-S SNP G -> A AC=1;AN=182;BQB=0.95117;DP=3224;DP4=1597,1528,13,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.05833e-15;MQSB=0.948915;RPB=0.646396;SGB=102.753;VDB=0.49135;EFF=INTRON(MODIFIER||||209|LOC_Os06g13010|protein_coding|CODING|LOC_Os06g13010.1|2|1) FN541-S.SNP.6:7137888 chr06:007137888 0 W/7137888-7137888 FN541-S Single Base Substitution A-T INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN541-S.SNP.6:7137889 chr06:007137889 0 W/7137889-7137889 FN541-S Single Base Substitution C-T INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2408.SNP.6:7138837 chr06:007138837 0 W/7138837-7138837 FN2408 SNP C -> T AC=2;AN=200;BQB=0.984129;DP=5156;DP4=2479,2314,19,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000193949;MQB=7.82044e-29;MQSB=0.830573;RPB=0.720982;SGB=166.451;VDB=0.504243;EFF=INTRON(MODIFIER||||1303|LOC_Os06g13030|protein_coding|CODING|LOC_Os06g13030.1|1|1),INTRON(MODIFIER||||1043|LOC_Os06g13030|protein_coding|CODING|LOC_Os06g13030.2|1|1) FN3360-S.SNP.6:7140123 chr06:007140123 0 W/7140123-7140123 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.144175;DP=3396;DP4=1333,1795,6,24;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.52405e-11;MQSB=0.438483;RPB=0.231412;SGB=-145.996;VDB=0.825045;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.6:7142948 chr06:007142948 0 W/7142948-7142948 FN792-S Single Base Substitution A-T INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN4041-S.SNP.6:7143962 chr06:007143962 0 W/7143962-7143962 FN4041-S SNP A -> T AC=1;AN=168;BQB=0.877665;DP=2734;DP4=1342,1178,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.04025e-07;MQSB=0.982848;RPB=0.226646;SGB=12.4615;VDB=0.513951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.6:7159447 chr06:007159447 0 W/7159447-7159447 FN2203-S SNP G -> A AC=2;AN=190;BQB=0.741356;DP=5121;DP4=2291,2340,37,41;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.04429e-37;MQSB=0.991964;RPB=0.866998;SGB=213.476;VDB=0.797949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.6:7161305 chr06:007161305 0 W/7161305-7161305 FN1760-S SNP C -> A AC=1;AN=188;BQB=0.776534;DP=4245;DP4=1976,2218,15,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.60971e-17;MQSB=0.899435;RPB=0.0985938;SGB=-5.76375;VDB=0.0811397;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C290F|435|LOC_Os06g13060|protein_coding|CODING|LOC_Os06g13060.1|9|1) FN1227-S.SNP.6:7163284 chr06:007163284 0 W/7163284-7163284 FN1227-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-156.SNP.6:7163809 chr06:007163809 0 W/7163809-7163809 FN-156 Single Base Substitution C-T INTRON HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3825-S.SNP.6:7170746 chr06:007170746 0 W/7170746-7170746 FN3825-S SNP A -> G AC=1;AN=190;BQB=0.719115;DP=2476;DP4=1165,1234,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03537e-06;MQSB=0.999998;RPB=0.79618;SGB=25.439;VDB=0.968615;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M262T|277|LOC_Os06g13070|protein_coding|CODING|LOC_Os06g13070.1|4|1) FN728-S.SNP.6:7175638 chr06:007175638 0 W/7175638-7175638 FN728-S Single Base Substitution G-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2152-S.SNP.6:7179348 chr06:007179348 0 W/7179348-7179348 FN2152-S SNP C -> A AC=2;AN=168;BQB=0.0830802;DP=4056;DP4=2231,1765,29,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.64543e-13;MQSB=0.962425;RPB=0.905615;SGB=-369.422;VDB=0.20443;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.6:7179726 chr06:007179726 0 W/7179726-7179726 FN1042-S Single Base Substitution C-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2581-S.SNP.6:7190005 chr06:007190005 0 W/7190005-7190005 FN2581-S SNP T -> C AC=2;AN=198;BQB=0.748881;DP=4340;DP4=1882,2176,12,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.46773e-17;MQSB=0.943261;RPB=0.846624;SGB=31.6811;VDB=0.356457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D81G|168|LOC_Os06g13100|protein_coding|CODING|LOC_Os06g13100.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D81G|215|LOC_Os06g13100|protein_coding|CODING|LOC_Os06g13100.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D81G|207|LOC_Os06g13100|protein_coding|CODING|LOC_Os06g13100.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D81G|168|LOC_Os06g13100|protein_coding|CODING|LOC_Os06g13100.4|3|1) FN1451-S.SNP.6:7195537 chr06:007195537 0 W/7195537-7195537 FN1451-S Single Base Substitution G-A INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN960-S.SNP.6:7197234 chr06:007197234 0 W/7197234-7197234 FN960-S Single Base Substitution G-A INTRON HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN-131.SNP.6:7210285 chr06:007210285 0 W/7210285-7210285 FN-131 Single Base Substitution C-A INTRON HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2137-S.SNP.6:7213385 chr06:007213385 0 W/7213385-7213385 FN2137-S SNP T -> A AC=1;AN=168;BQB=0.138636;DP=4380;DP4=2160,2187,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.61468e-07;MQSB=0.967401;RPB=0.926316;SGB=-63.3606;VDB=0.249298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.6:7214681 chr06:007214681 0 W/7214681-7214681 FN3851-S SNP A -> G AC=2;AN=158;BQB=0.920955;DP=2050;DP4=945,989,12,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.09604e-08;MQSB=0.979369;RPB=0.22921;SGB=68.9144;VDB=0.633854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.6:7231358 chr06:007231358 0 W/7231358-7231358 FN1724-S SNP G -> A AC=1;AN=188;BQB=0.0102191;DP=2908;DP4=952,1927,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2937e-05;MQSB=0.747294;RPB=0.710441;SGB=-121.349;VDB=0.31891;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.6:7232502 chr06:007232502 0 W/7232502-7232502 FN4129-S SNP A -> T AC=2;AN=182;BQB=0.954933;DP=3647;DP4=2182,1301,34,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.36955e-25;MQSB=0.986575;RPB=0.996118;SGB=95.959;VDB=0.821888;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D256E|521|LOC_Os06g13200|protein_coding|CODING|LOC_Os06g13200.1|3|1) FN2677-S.SNP.6:7241299 chr06:007241299 0 W/7241299-7241299 FN2677-S SNP C -> G AC=1;AN=200;BQB=0.686067;DP=4911;DP4=2311,2393,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.95655e-14;MQSB=0.731005;RPB=0.98913;SGB=15.9106;VDB=0.286154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.6:7251190 chr06:007251190 0 W/7251190-7251190 FN1630-S Single Base Substitution G-A INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3695-S.SNP.6:7253638 chr06:007253638 0 W/7253638-7253638 FN3695-S SNP T -> G AC=2;AN=190;BQB=0.977538;DP=2236;DP4=766,1384,5,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.00242161;MQSB=0.778129;RPB=0.847373;SGB=44.5415;VDB=0.758178;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.6:7262426 chr06:007262426 0 W/7262426-7262426 FN944-S Single Base Substitution C-T INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN625-S.SNP.6:7263754 chr06:007263754 0 W/7263754-7263754 FN625-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN871-S.SNP.6:7264760 chr06:007264760 0 W/7264760-7264760 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3427-S.SNP.6:7267686 chr06:007267686 0 W/7267686-7267686 FN3427-S SNP C -> T AC=1;AN=184;BQB=0.508336;DP=3409;DP4=1939,1369,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.08737e-09;MQSB=0.52679;RPB=0.999244;SGB=30.8405;VDB=0.653102;EFF=UTR_3_PRIME(MODIFIER||408||168|LOC_Os06g13230|protein_coding|CODING|LOC_Os06g13230.1|1|1) FN1492-S.SNP.6:7270723 chr06:007270723 0 W/7270723-7270723 FN1492-S Single Base Substitution A-G INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN930-S.SNP.6:7274161 chr06:007274161 0 W/7274161-7274161 FN930-S Single Base Substitution A-T INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1062-S.SNP.6:7277619 chr06:007277619 0 W/7277619-7277619 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3958-S.SNP.6:7281398 chr06:007281398 0 W/7281398-7281398 FN3958-S SNP C -> G AC=1;AN=168;BQB=0.391055;DP=2664;DP4=1242,1305,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.24993e-09;MQSB=0.214238;RPB=0.430113;SGB=78.7577;VDB=0.703347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N190K|515|LOC_Os06g13240|protein_coding|CODING|LOC_Os06g13240.1|4|1) FN2706-S.SNP.6:7285138 chr06:007285138 0 W/7285138-7285138 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.00377304;DP=4250;DP4=2100,1828,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.85303e-06;MQSB=0.596378;RPB=0.999899;SGB=72.6852;VDB=0.768316;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.6:7285367 chr06:007285367 0 W/7285367-7285367 FN458-S Single Base Substitution T-G INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN2197-S.SNP.6:7286966 chr06:007286966 0 W/7286966-7286966 FN2197-S SNP G -> A AC=1;AN=190;BQB=0.942778;DP=4697;DP4=2252,2187,1,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000212902;MQB=2.93674e-05;MQSB=0.916715;RPB=0.75243;SGB=30.8803;VDB=0.259674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.6:7288732 chr06:007288732 0 W/7288732-7288732 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.982919;DP=2293;DP4=1079,1113,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.61348e-08;MQSB=0.721817;RPB=0.989871;SGB=39.2697;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.6:7314488 chr06:007314488 0 W/7314488-7314488 FN2488 SNP T -> C AC=2;AN=200;BQB=0.996275;DP=4316;DP4=2332,1627,22,15;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=5.272e-14;MQSB=0.0138299;RPB=0.355062;SGB=81.5883;VDB=0.599246;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.6:7315505 chr06:007315505 0 W/7315505-7315505 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.852029;DP=5038;DP4=2391,2442,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54488e-08;MQSB=0.99557;RPB=0.152838;SGB=43.8747;VDB=0.0690071;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:7316597 chr06:007316597 0 W/7316597-7316597 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.682736;DP=4371;DP4=1720,2365,11,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19072e-23;MQSB=0.999988;RPB=0.865379;SGB=119.583;VDB=0.157006;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:7316598 chr06:007316598 0 W/7316598-7316598 FN2657-S SNP T -> G AC=1;AN=200;BQB=0.369114;DP=4371;DP4=1686,2427,12,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49637e-23;MQSB=0.995775;RPB=0.883816;SGB=119.583;VDB=0.133743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:7316599 chr06:007316599 0 W/7316599-7316599 FN2657-S SNP A -> T AC=1;AN=200;BQB=0.963365;DP=4372;DP4=1688,2428,11,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78251e-22;MQSB=0.975717;RPB=0.614711;SGB=78.9831;VDB=0.211396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.6:7317054 chr06:007317054 0 W/7317054-7317054 FN1644-S Single Base Substitution A-G INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN4084-S.SNP.6:7319835 chr06:007319835 0 W/7319835-7319835 FN4084-S SNP G -> A AC=1;AN=182;BQB=0.826889;DP=2874;DP4=1109,1672,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.79133e-09;MQSB=0.963275;RPB=0.459633;SGB=71.1765;VDB=0.642875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T115I|447|LOC_Os06g13310|protein_coding|CODING|LOC_Os06g13310.1|4|1) FN992-S.SNP.6:7321341 chr06:007321341 0 W/7321341-7321341 FN992-S Single Base Substitution A-G INTRON HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN2680-S.SNP.6:7323616 chr06:007323616 0 W/7323616-7323616 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.972106;DP=5049;DP4=2374,2402,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00803e-12;MQSB=0.997741;RPB=0.55471;SGB=58.2954;VDB=0.0877399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1134-S.SNP.6:7327694 chr06:007327694 0 W/7327694-7327694 FN1134-S Single Base Substitution C-A INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN2282.SNP.6:7335275 chr06:007335275 0 W/7335275-7335275 FN2282 SNP G -> A AC=1;AN=192;BQB=0.81653;DP=4764;DP4=2362,1990,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.52014e-16;MQSB=0.99736;RPB=0.999993;SGB=103.938;VDB=0.279978;EFF=INTRON(MODIFIER||||237|LOC_Os06g13330|protein_coding|CODING|LOC_Os06g13330.1|5|1) FN1251-S.SNP.6:7337531 chr06:007337531 0 W/7337531-7337531 FN1251-S Single Base Substitution G-T INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-281.SNP.6:7341541 chr06:007341541 0 W/7341541-7341541 FN-281 Single Base Substitution A-G INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3451-S.SNP.6:7343831 chr06:007343831 0 W/7343831-7343831 FN3451-S SNP A -> G AC=1;AN=184;BQB=0.956365;DP=2538;DP4=1251,1231,4,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000226792;MQSB=0.958073;RPB=0.84917;SGB=21.6146;VDB=0.448427;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F145|375|LOC_Os06g13350|protein_coding|CODING|LOC_Os06g13350.1|2|1) FN2577-S.SNP.6:7359034 chr06:007359034 0 W/7359034-7359034 FN2577-S SNP G -> T AC=1;AN=198;BQB=7.47137e-08;DP=3283;DP4=771,1695,43,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.50387e-16;MQSB=6.82323e-37;RPB=1.22772e-10;SGB=-574.981;VDB=3.70162e-08;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.6:7361456 chr06:007361456 0 W/7361456-7361456 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.659533;DP=2591;DP4=1279,1232,13,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.98573e-22;MQSB=0.925365;RPB=0.813274;SGB=85.386;VDB=0.808644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2158-S.SNP.6:7365604 chr06:007365604 0 W/7365604-7365604 FN2158-S SNP G -> C AC=2;AN=168;BQB=0.351069;DP=3071;DP4=1786,1234,25,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00390752;MQB=2.89157e-20;MQSB=0.798933;RPB=0.630524;SGB=117.088;VDB=0.274918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q426H|484|LOC_Os06g13370|protein_coding|CODING|LOC_Os06g13370.1|5|1) W42-1-3S-1.SNP.6:7366681 chr06:007366681 0 W/7366681-7366681 W42-1-3S-1 Single Base Substitution G-T INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3791-S.SNP.6:7368837 chr06:007368837 0 W/7368837-7368837 FN3791-S SNP T -> A AC=1;AN=190;BQB=0.301842;DP=2515;DP4=779,1636,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.25715e-08;MQSB=0.897007;RPB=0.869801;SGB=15.9981;VDB=0.969321;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.6:7368838 chr06:007368838 0 W/7368838-7368838 FN3791-S SNP G -> A AC=1;AN=190;BQB=0.911078;DP=2514;DP4=787,1632,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65321e-07;MQSB=0.853971;RPB=0.971331;SGB=28.9929;VDB=0.969608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.6:7370931 chr06:007370931 0 W/7370931-7370931 FN1687-S SNP A -> G AC=2;AN=188;BQB=0.00254093;DP=3387;DP4=2126,1193,39,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.55354e-24;MQSB=0.960084;RPB=0.451156;SGB=76.7609;VDB=0.542325;EFF=UTR_5_PRIME(MODIFIER||163||352|LOC_Os06g13390|protein_coding|CODING|LOC_Os06g13390.1|1|1) FN407-S.SNP.6:7373061 chr06:007373061 0 W/7373061-7373061 FN407-S Single Base Substitution G-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2210-S.SNP.6:7379729 chr06:007379729 0 W/7379729-7379729 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.993184;DP=3655;DP4=1788,1569,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000547196;MQB=1.44302e-09;MQSB=0.461368;RPB=0.997053;SGB=80.9724;VDB=0.242124;EFF=INTRON(MODIFIER||||291|LOC_Os06g13420|protein_coding|CODING|LOC_Os06g13420.1|2|1) FN1093-S.SNP.6:7380539 chr06:007380539 0 W/7380539-7380539 FN1093-S Single Base Substitution G-A INTRON HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN373-S.SNP.6:7386459 chr06:007386459 0 W/7386459-7386459 FN373-S Single Base Substitution C-T INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN811-S.SNP.6:7400720 chr06:007400720 0 W/7400720-7400720 FN811-S Single Base Substitution C-T INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN811-S.SNP.6:7400721 chr06:007400721 0 W/7400721-7400721 FN811-S Single Base Substitution C-T INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN-335.SNP.6:7410395 chr06:007410395 0 W/7410395-7410395 FN-335 Single Base Substitution G-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN628-S.SNP.6:7410395 chr06:007410395 0 W/7410395-7410395 FN628-S Single Base Substitution G-A INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2573-S.SNP.6:7411453 chr06:007411453 0 W/7411453-7411453 FN2573-S SNP C -> T AC=2;AN=198;BQB=0.923841;DP=4178;DP4=2177,1662,10,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.31182e-09;MQSB=0.95122;RPB=0.889493;SGB=50.9344;VDB=0.80613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.6:7417929 chr06:007417929 0 W/7417929-7417929 FN1269-S Single Base Substitution G-A INTRON HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN-377.SNP.6:7420651 chr06:007420651 0 W/7420651-7420651 FN-377 Single Base Substitution C-A INTRON HOMO SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN806-S.SNP.6:7427128 chr06:007427128 0 W/7427128-7427128 FN806-S Single Base Substitution G-C INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN580-S.SNP.6:7427888 chr06:007427888 0 W/7427888-7427888 FN580-S Single Base Substitution T-G INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2417.SNP.6:7427999 chr06:007427999 0 W/7427999-7427999 FN2417 SNP G -> A AC=1;AN=200;BQB=0.965981;DP=5077;DP4=2565,2170,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.84895e-07;MQSB=0.594152;RPB=0.800568;SGB=49.6594;VDB=0.250675;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.6:7431443 chr06:007431443 0 W/7431443-7431443 FN3777-S SNP C -> T AC=1;AN=190;BQB=0.921508;DP=2262;DP4=1233,956,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.7519e-05;MQSB=0.222965;RPB=0.794452;SGB=39.9877;VDB=0.882989;EFF=INTRON(MODIFIER||||286|LOC_Os06g13490|protein_coding|CODING|LOC_Os06g13490.1|2|1) FN3864-S.SNP.6:7433529 chr06:007433529 0 W/7433529-7433529 FN3864-S SNP C -> T AC=1;AN=158;BQB=0.937251;DP=2455;DP4=1259,1093,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.16198e-09;MQSB=0.963021;RPB=0.306749;SGB=37.4429;VDB=0.406196;EFF=INTRON(MODIFIER||||286|LOC_Os06g13490|protein_coding|CODING|LOC_Os06g13490.1|1|1) FN1473-S.SNP.6:7443142 chr06:007443142 0 W/7443142-7443142 FN1473-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g13500 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2577-S.SNP.6:7448196 chr06:007448196 0 W/7448196-7448196 FN2577-S SNP G -> A AC=1;AN=198;BQB=0.800781;DP=4175;DP4=2081,1898,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06834e-08;MQSB=0.996663;RPB=0.705554;SGB=54.144;VDB=0.0469937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.6:7456794 chr06:007456794 0 W/7456794-7456794 FN2740-S SNP T -> A AC=1;AN=200;BQB=0.980226;DP=4408;DP4=2144,2094,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82445e-10;MQSB=0.970276;RPB=0.0558119;SGB=26.8797;VDB=0.260032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.6:7459790 chr06:007459790 0 W/7459790-7459790 FN3460-S SNP G -> A AC=1;AN=184;BQB=0.949181;DP=2991;DP4=1373,1550,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.39178e-05;MQSB=0.946522;RPB=0.575547;SGB=18.1394;VDB=0.912185;EFF=INTRON(MODIFIER||||267|LOC_Os06g13520|protein_coding|CODING|LOC_Os06g13520.1|1|1) FN2260-S.SNP.6:7461329 chr06:007461329 0 W/7461329-7461329 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.00631283;DP=5025;DP4=2565,2099,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22304e-12;MQSB=0.666267;RPB=0.912187;SGB=89.4087;VDB=0.912078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G138D|267|LOC_Os06g13520|protein_coding|CODING|LOC_Os06g13520.1|3|1),SPLICE_SITE_REGION(LOW||||267|LOC_Os06g13520|protein_coding|CODING|LOC_Os06g13520.1|3|1) FN3401-S.SNP.6:7463739 chr06:007463739 0 W/7463739-7463739 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.946151;DP=2588;DP4=1195,1337,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33104e-07;MQSB=0.926371;RPB=0.532987;SGB=44.2207;VDB=0.00697496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3110-S.SNP.6:7464069 chr06:007464069 0 W/7464069-7464069 FN3110-S SNP A -> G AC=1;AN=184;BQB=0.993528;DP=2820;DP4=1246,1434,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.02037e-12;MQSB=0.996533;RPB=0.950734;SGB=85.0529;VDB=0.509713;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.6:7464069 chr06:007464069 0 W/7464069-7464069 FN565-S Single Base Substitution A-G INTERGENIC HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN820-S.SNP.6:7464069 chr06:007464069 0 W/7464069-7464069 FN820-S Single Base Substitution A-G INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN1459-S.SNP.6:7476166 chr06:007476166 0 W/7476166-7476166 FN1459-S Single Base Substitution G-T INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. W470-2-1.SNP.6:7483762 chr06:007483762 0 W/7483762-7483762 W470-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3531-S.SNP.6:7488062 chr06:007488062 0 W/7488062-7488062 FN3531-S SNP C -> A AC=1;AN=188;BQB=0.99702;DP=3293;DP4=2044,1112,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.45014e-08;MQSB=0.605441;RPB=0.186594;SGB=76.2387;VDB=0.80483;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.6:7497802 chr06:007497802 0 W/7497802-7497802 FN-217 Single Base Substitution T-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-217.SNP.6:7497804 chr06:007497804 0 W/7497804-7497804 FN-217 Single Base Substitution G-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2114-S.SNP.6:7508325 chr06:007508325 0 W/7508325-7508325 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.920842;DP=3716;DP4=1859,1834,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02593e-06;MQSB=0.0064983;RPB=0.995772;SGB=34.748;VDB=0.963707;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.6:7514170 chr06:007514170 0 W/7514170-7514170 FN859-S Single Base Substitution C-T INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN853-S.SNP.6:7518704 chr06:007518704 0 W/7518704-7518704 FN853-S Single Base Substitution T-A INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN853-S.SNP.6:7518705 chr06:007518705 0 W/7518705-7518705 FN853-S Single Base Substitution G-A INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN853-S.SNP.6:7518706 chr06:007518706 0 W/7518706-7518706 FN853-S Single Base Substitution C-A INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN2344.SNP.6:7519485 chr06:007519485 0 W/7519485-7519485 FN2344 SNP A -> C AC=1;AN=192;BQB=0.996957;DP=5403;DP4=2536,2541,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.12315e-15;MQSB=0.999858;RPB=0.801459;SGB=59.6861;VDB=0.3119;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.6:7522093 chr06:007522093 0 W/7522093-7522093 FN601-S Single Base Substitution C-A INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1117-S.SNP.6:7523157 chr06:007523157 0 W/7523157-7523157 FN1117-S Single Base Substitution T-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3294-S.SNP.6:7523370 chr06:007523370 0 W/7523370-7523370 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.952934;DP=2987;DP4=1311,1579,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.34487e-06;MQSB=0.892051;RPB=0.18626;SGB=35.1773;VDB=0.412749;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.6:7524373 chr06:007524373 0 W/7524373-7524373 FN1536-S Single Base Substitution G-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-94.SNP.6:7525642 chr06:007525642 0 W/7525642-7525642 FN-94 Single Base Substitution G-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. W598-2-1.SNP.6:7544761 chr06:007544761 0 W/7544761-7544761 W598-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g13620 expressed protein SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1086-S.SNP.6:7549286 chr06:007549286 0 W/7549286-7549286 FN1086-S Single Base Substitution A-G INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4229-S.SNP.6:7549693 chr06:007549693 0 W/7549693-7549693 FN4229-S SNP C -> T AC=2;AN=170;BQB=0.228631;DP=2306;DP4=1153,1061,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.47463e-08;MQSB=0.636499;RPB=0.690729;SGB=62.4192;VDB=0.84893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.6:7550184 chr06:007550184 0 W/7550184-7550184 FN3354-S SNP A -> T AC=1;AN=184;BQB=0.982926;DP=2581;DP4=1130,1379,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.18446e-09;MQSB=0.844188;RPB=0.591916;SGB=25.7969;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.6:7553016 chr06:007553016 0 W/7553016-7553016 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.94969;DP=4869;DP4=2599,2019,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.64625e-08;MQSB=0.809393;RPB=0.942683;SGB=47.4799;VDB=0.623554;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.6:7554247 chr06:007554247 0 W/7554247-7554247 FN2609-S SNP T -> A AC=2;AN=198;BQB=0.996649;DP=4191;DP4=1959,1981,40,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.35384e-35;MQSB=0.982042;RPB=0.804464;SGB=179.347;VDB=0.252287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.6:7557626 chr06:007557626 0 W/7557626-7557626 FN-184 Single Base Substitution C-T INTRON HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2639-S.SNP.6:7559526 chr06:007559526 0 W/7559526-7559526 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.901413;DP=4976;DP4=2401,2340,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.96361e-17;MQSB=0.980648;RPB=0.909329;SGB=63.3521;VDB=0.66335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.6:7563351 chr06:007563351 0 W/7563351-7563351 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.987278;DP=5232;DP4=2363,2513,27,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000191132;MQB=2.62284e-31;MQSB=0.972373;RPB=0.261572;SGB=123.261;VDB=0.408051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1583-S.SNP.6:7566720 chr06:007566720 0 W/7566720-7566720 FN1583-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN726-S.SNP.6:7574397 chr06:007574397 0 W/7574397-7574397 FN726-S Single Base Substitution G-T INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. W279-4-1.SNP.6:7582243 chr06:007582243 0 W/7582243-7582243 W279-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN-131.SNP.6:7585744 chr06:007585744 0 W/7585744-7585744 FN-131 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3905-S.SNP.6:7587834 chr06:007587834 0 W/7587834-7587834 FN3905-S SNP A -> G AC=1;AN=158;BQB=0.425349;DP=2851;DP4=1422,1316,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.05103e-07;MQSB=0.967565;RPB=0.391901;SGB=55.806;VDB=0.788754;EFF=INTRON(MODIFIER||||425|LOC_Os06g13670|protein_coding|CODING|LOC_Os06g13670.1|9|1) FN3886-S.SNP.6:7596998 chr06:007596998 0 W/7596998-7596998 FN3886-S SNP T -> C AC=1;AN=158;BQB=0.479712;DP=2630;DP4=1258,1275,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.66318e-07;MQSB=0.267972;RPB=0.934568;SGB=19.0798;VDB=0.993788;EFF=INTRON(MODIFIER||||100|LOC_Os06g13700|protein_coding|CODING|LOC_Os06g13700.1|1|1) FN1062-S.SNP.6:7600379 chr06:007600379 0 W/7600379-7600379 FN1062-S Single Base Substitution G-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3323-S.SNP.6:7600775 chr06:007600775 0 W/7600775-7600775 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.915092;DP=3454;DP4=1466,1857,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.40976e-07;MQSB=0.755875;RPB=0.469964;SGB=39.699;VDB=0.167265;EFF=INTERGENIC(MODIFIER||||||||||1) FN3985-S.SNP.6:7602698 chr06:007602698 0 W/7602698-7602698 FN3985-S SNP C -> T AC=1;AN=168;BQB=0.921774;DP=1950;DP4=1066,786,10,1;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=4.64312e-05;MQSB=0.00489591;RPB=0.918716;SGB=43.3113;VDB=0.876459;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T45|398|LOC_Os06g13720|protein_coding|CODING|LOC_Os06g13720.1|1|1) FN3312-S.SNP.6:7605253 chr06:007605253 0 W/7605253-7605253 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.178757;DP=2290;DP4=484,1486,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000873362;MQB=2.20934e-06;MQSB=0.134333;RPB=0.863995;SGB=-86.6977;VDB=0.957894;EFF=INTRON(MODIFIER||||398|LOC_Os06g13720|protein_coding|CODING|LOC_Os06g13720.1|7|1) FN2771-S.SNP.6:7616684 chr06:007616684 0 W/7616684-7616684 FN2771-S SNP A -> G AC=1;AN=198;BQB=0.182521;DP=4174;DP4=1994,1986,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239578;MQB=1.26069e-08;MQSB=0.991118;RPB=0.746684;SGB=-59.8257;VDB=0.54635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K28E|838|LOC_Os06g13740|protein_coding|CODING|LOC_Os06g13740.1|1|1) FN2692-S.SNP.6:7618108 chr06:007618108 0 W/7618108-7618108 FN2692-S SNP A -> T AC=1;AN=200;BQB=0.753445;DP=5412;DP4=2783,2401,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78654e-18;MQSB=0.122876;RPB=0.990102;SGB=127.947;VDB=0.495604;EFF=INTRON(MODIFIER||||838|LOC_Os06g13740|protein_coding|CODING|LOC_Os06g13740.1|2|1) FN3437-S.SNP.6:7618800 chr06:007618800 0 W/7618800-7618800 FN3437-S SNP A -> C AC=1;AN=184;BQB=0.968353;DP=2666;DP4=1220,1364,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00187547;MQB=0.00431814;MQSB=0.989101;RPB=0.842819;SGB=30.6558;VDB=0.177545;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R606|838|LOC_Os06g13740|protein_coding|CODING|LOC_Os06g13740.1|3|1) FN3858-S.SNP.6:7650055 chr06:007650055 0 W/7650055-7650055 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.974789;DP=2402;DP4=1276,1049,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.51282e-05;MQSB=0.999769;RPB=0.861691;SGB=33.9591;VDB=0.583058;EFF=INTRON(MODIFIER||||567|LOC_Os06g13810|protein_coding|CODING|LOC_Os06g13810.1|12|1),INTRON(MODIFIER||||438|LOC_Os06g13810|protein_coding|CODING|LOC_Os06g13810.3|10|1) FN570-S.SNP.6:7655654 chr06:007655654 0 W/7655654-7655654 FN570-S Single Base Substitution T-A INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3391-S.SNP.6:7659578 chr06:007659578 0 W/7659578-7659578 FN3391-S SNP C -> T AC=1;AN=184;BQB=0.984297;DP=3739;DP4=1552,2070,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77634e-06;MQSB=0.957746;RPB=0.895136;SGB=28.7043;VDB=0.600818;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.6:7660355 chr06:007660355 0 W/7660355-7660355 FN-165 Single Base Substitution C-T INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN2207-S.SNP.6:7675528 chr06:007675528 0 W/7675528-7675528 FN2207-S SNP A -> G AC=1;AN=190;BQB=0.653933;DP=5012;DP4=2153,2392,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199521;MQB=0.000592195;MQSB=0.148826;RPB=1;SGB=-17.653;VDB=0.701275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.6:7675555 chr06:007675555 0 W/7675555-7675555 FN1269-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1057-S.SNP.6:7677472 chr06:007677472 0 W/7677472-7677472 FN1057-S Single Base Substitution T-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2201-S.SNP.6:7681290 chr06:007681290 0 W/7681290-7681290 FN2201-S SNP T -> C AC=1;AN=190;BQB=0.935722;DP=4837;DP4=2691,1829,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.204259;MQB=0.919419;MQSB=2.88844e-07;RPB=0.94163;SGB=85.5263;VDB=0.454177;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.6:7683770 chr06:007683770 0 W/7683770-7683770 FN_809-6-1 Single Base Substitution T-A Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2621-S.SNP.6:7685876 chr06:007685876 0 W/7685876-7685876 FN2621-S SNP A -> G AC=1;AN=200;BQB=0.910431;DP=4977;DP4=2346,2389,15,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.45466e-21;MQSB=0.227813;RPB=0.520072;SGB=115.978;VDB=0.167698;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.6:7691876 chr06:007691876 0 W/7691876-7691876 FN-332 Single Base Substitution C-T INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. W279-4-1.SNP.6:7692233 chr06:007692233 0 W/7692233-7692233 W279-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. W279-4-1.SNP.6:7692234 chr06:007692234 0 W/7692234-7692234 W279-4-1 Single Base Substitution T-A INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN584-S.SNP.6:7692555 chr06:007692555 0 W/7692555-7692555 FN584-S Single Base Substitution T-C INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2213-S.SNP.6:7692814 chr06:007692814 0 W/7692814-7692814 FN2213-S SNP A -> T AC=2;AN=190;BQB=0.77874;DP=4515;DP4=2015,2119,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000221484;MQB=1.09658e-22;MQSB=0.181327;RPB=0.511495;SGB=139.163;VDB=0.405683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.6:7708403 chr06:007708403 0 W/7708403-7708403 FN1339-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2459.SNP.6:7710720 chr06:007710720 0 W/7710720-7710720 FN2459 SNP T -> C AC=2;AN=200;BQB=0.228455;DP=4285;DP4=2349,1576,25,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.571e-24;MQSB=0.561615;RPB=0.476442;SGB=1.41385;VDB=0.0582506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.6:7711184 chr06:007711184 0 W/7711184-7711184 FN3598-S SNP A -> T AC=1;AN=188;BQB=0.999937;DP=2617;DP4=1363,1055,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21785e-07;MQSB=0.704325;RPB=0.998826;SGB=50.1574;VDB=0.246622;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.6:7712929 chr06:007712929 0 W/7712929-7712929 FN513-S Single Base Substitution C-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3563-S.SNP.6:7724725 chr06:007724725 0 W/7724725-7724725 FN3563-S SNP C -> T AC=1;AN=188;BQB=0.985938;DP=2846;DP4=1383,1354,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57988e-13;MQSB=0.862963;RPB=0.915217;SGB=98.9552;VDB=0.336049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.6:7730052 chr06:007730052 0 W/7730052-7730052 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.559209;DP=4631;DP4=2051,2251,21,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.10055e-19;MQSB=0.448965;RPB=0.421645;SGB=76.0565;VDB=0.575504;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.6:7730869 chr06:007730869 0 W/7730869-7730869 FN2211-S SNP T -> C AC=1;AN=190;BQB=0.659084;DP=4937;DP4=2073,2594,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51287e-14;MQSB=0.898165;RPB=0.751515;SGB=82.301;VDB=0.262373;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.6:7746973 chr06:007746973 0 W/7746973-7746973 FN4116-S SNP A -> T AC=1;AN=182;BQB=0.619684;DP=3217;DP4=1426,1685,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.71712e-07;MQSB=0.99322;RPB=0.98067;SGB=42.6494;VDB=0.407466;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.6:7750222 chr06:007750222 0 W/7750222-7750222 FN4116-S SNP G -> T AC=1;AN=182;BQB=0.808429;DP=3019;DP4=1463,1472,13,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.44122e-16;MQSB=0.990874;RPB=0.629474;SGB=107.263;VDB=0.838181;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.6:7754765 chr06:007754765 0 W/7754765-7754765 FN3893-S SNP G -> A AC=1;AN=158;BQB=0.812041;DP=2086;DP4=879,1118,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.42174e-05;MQSB=0.957;RPB=0.985567;SGB=27.3346;VDB=0.243641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.6:7756868 chr06:007756868 0 W/7756868-7756868 FN1410-S Single Base Substitution C-T INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1513-S.SNP.6:7757460 chr06:007757460 0 W/7757460-7757460 FN1513-S Single Base Substitution T-G INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN4101-S.SNP.6:7757943 chr06:007757943 0 W/7757943-7757943 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.961679;DP=2788;DP4=1352,1358,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0003e-08;MQSB=0.999323;RPB=0.524352;SGB=62.1548;VDB=0.065281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R633H|693|LOC_Os06g13920|protein_coding|CODING|LOC_Os06g13920.1|5|1) FN-200.SNP.6:7760386 chr06:007760386 0 W/7760386-7760386 FN-200 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g13920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN715-S.SNP.6:7769273 chr06:007769273 0 W/7769273-7769273 FN715-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g13950 pentatricopeptide, putative, expressed SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN2483.SNP.6:7770711 chr06:007770711 0 W/7770711-7770711 FN2483 SNP C -> A AC=1;AN=200;BQB=0.768865;DP=3328;DP4=1479,1660,9,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000300481;MQB=2.20883e-06;MQSB=2.73388e-14;RPB=0.852395;SGB=63.4749;VDB=0.508575;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.6:7778456 chr06:007778456 0 W/7778456-7778456 FN577-S Single Base Substitution A-G INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1140-S.SNP.6:7779092 chr06:007779092 0 W/7779092-7779092 FN1140-S Single Base Substitution A-G INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN476-S.SNP.6:7780412 chr06:007780412 0 W/7780412-7780412 FN476-S Single Base Substitution T-A SPLICE_SITE_DONOR HET LOC_Os06g13970 retrotransposon protein, putative, unclassified, expressed SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3793-S.SNP.6:7780802 chr06:007780802 0 W/7780802-7780802 FN3793-S SNP G -> A AC=2;AN=190;BQB=0.846503;DP=2863;DP4=1440,1276,20,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.34576e-15;MQSB=0.847295;RPB=0.646171;SGB=74.7373;VDB=0.3046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R134Q|229|LOC_Os06g13970|protein_coding|CODING|LOC_Os06g13970.1|2|1),INTRON(MODIFIER||||371|LOC_Os06g13960|protein_coding|CODING|LOC_Os06g13960.1|2|1) FN2729-S.SNP.6:7782657 chr06:007782657 0 W/7782657-7782657 FN2729-S SNP T -> A AC=2;AN=200;BQB=0.845867;DP=4397;DP4=1844,2092,29,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.84734e-19;MQSB=0.997537;RPB=0.992212;SGB=-253.561;VDB=0.935418;EFF=INTRON(MODIFIER||||371|LOC_Os06g13960|protein_coding|CODING|LOC_Os06g13960.1|2|1) FN1112-S.SNP.6:7783651 chr06:007783651 0 W/7783651-7783651 FN1112-S Single Base Substitution G-A INTRON HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1276-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN1276-S Single Base Substitution G-C INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1366-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN1366-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1445-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN1445-S Single Base Substitution G-C INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2457.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN2457 SNP G -> C AC=1;AN=200;BQB=0.809531;DP=4669;DP4=2141,2230,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11264e-12;MQSB=0.650578;RPB=0.884273;SGB=69.1109;VDB=0.857845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN2592-S SNP G -> C AC=2;AN=198;BQB=0.487122;DP=4396;DP4=1993,2141,21,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.13156e-22;MQSB=0.949369;RPB=0.986203;SGB=115.647;VDB=0.705494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN2739-S SNP G -> C AC=2;AN=200;BQB=0.358158;DP=4948;DP4=2242,2394,26,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.89333e-22;MQSB=0.911336;RPB=0.98108;SGB=137.609;VDB=0.288526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN3477-S SNP G -> C AC=1;AN=184;BQB=0.941675;DP=2720;DP4=1327,1314,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46188e-08;MQSB=0.999053;RPB=0.659127;SGB=53.2642;VDB=0.610232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN3779-S SNP G -> C AC=2;AN=190;BQB=0.988372;DP=2661;DP4=1274,1291,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.9545e-15;MQSB=0.947253;RPB=0.901925;SGB=112.85;VDB=0.964235;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN4224-S SNP G -> C AC=1;AN=170;BQB=0.946649;DP=2439;DP4=1198,1190,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.94638e-07;MQSB=0.962282;RPB=0.741052;SGB=43.4296;VDB=0.148379;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN682-S Single Base Substitution G-C INTERGENIC HOMO SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN733-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN733-S Single Base Substitution G-C INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN852-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN852-S Single Base Substitution G-C INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN864-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN864-S Single Base Substitution G-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN944-S.SNP.6:7797539 chr06:007797539 0 W/7797539-7797539 FN944-S Single Base Substitution G-C INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2106-S.SNP.6:7804984 chr06:007804984 0 W/7804984-7804984 FN2106-S SNP C -> A AC=1;AN=168;BQB=0.259605;DP=4517;DP4=2131,2330,14,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.14924e-10;MQSB=0.999829;RPB=0.857275;SGB=-140.764;VDB=0.425957;EFF=INTRON(MODIFIER||||858|LOC_Os06g14030|protein_coding|CODING|LOC_Os06g14030.1|1|1) FN3305-S.SNP.6:7805119 chr06:007805119 0 W/7805119-7805119 FN3305-S SNP G -> T AC=2;AN=184;BQB=0.522978;DP=3188;DP4=1847,1238,18,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.88531e-12;MQSB=0.9684;RPB=0.540864;SGB=81.5311;VDB=0.337556;EFF=INTRON(MODIFIER||||858|LOC_Os06g14030|protein_coding|CODING|LOC_Os06g14030.1|1|1) FN3466-S.SNP.6:7811268 chr06:007811268 0 W/7811268-7811268 FN3466-S SNP T -> A AC=1;AN=184;BQB=0.869973;DP=3063;DP4=1430,1536,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.26156e-11;MQSB=0.915265;RPB=0.989155;SGB=33.3622;VDB=0.300554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.6:7811269 chr06:007811269 0 W/7811269-7811269 FN3466-S SNP T -> A AC=1;AN=184;BQB=0.387035;DP=3066;DP4=1430,1514,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93461e-11;MQSB=0.954608;RPB=0.966421;SGB=-13.6704;VDB=0.37493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.6:7813173 chr06:007813173 0 W/7813173-7813173 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.146608;DP=4933;DP4=2055,2698,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55246e-06;MQSB=0.927414;RPB=0.970401;SGB=-16.1361;VDB=0.918279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.6:7813591 chr06:007813591 0 W/7813591-7813591 FN-122 Single Base Substitution T-A INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-122.SNP.6:7813593 chr06:007813593 0 W/7813593-7813593 FN-122 Single Base Substitution T-A INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2657-S.SNP.6:7815983 chr06:007815983 0 W/7815983-7815983 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.947251;DP=4866;DP4=2134,2503,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16e-08;MQSB=0.998973;RPB=0.307543;SGB=7.88476;VDB=0.223209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.6:7818219 chr06:007818219 0 W/7818219-7818219 FN3707-S SNP T -> A AC=1;AN=190;BQB=0.938799;DP=2970;DP4=1546,1309,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23647e-07;MQSB=0.937412;RPB=0.743177;SGB=44.5415;VDB=0.223991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.6:7822655 chr06:007822655 0 W/7822655-7822655 FN2531-S SNP A -> G AC=1;AN=198;BQB=0.925797;DP=4728;DP4=2316,2116,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.37483e-10;MQSB=0.94103;RPB=0.193332;SGB=-11.4553;VDB=0.292565;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.6:7829293 chr06:007829293 0 W/7829293-7829293 FN680-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3821-S.SNP.6:7838899 chr06:007838899 0 W/7838899-7838899 FN3821-S SNP A -> T AC=1;AN=190;BQB=0.759795;DP=2500;DP4=1064,1362,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.58904e-06;MQSB=0.924504;RPB=0.0396986;SGB=35.4339;VDB=0.0159125;EFF=INTRON(MODIFIER||||621|LOC_Os06g14050|protein_coding|CODING|LOC_Os06g14050.1|4|1) FN-62.SNP.6:7839519 chr06:007839519 0 W/7839519-7839519 FN-62 Single Base Substitution A-G INTRON HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1680-S.SNP.6:7852831 chr06:007852831 0 W/7852831-7852831 FN1680-S SNP C -> T AC=1;AN=188;BQB=0.715184;DP=3776;DP4=1838,1885,19,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.75331e-20;MQSB=0.843264;RPB=0.880551;SGB=-2.50398;VDB=0.423816;EFF=INTRON(MODIFIER||||608|LOC_Os06g14080|protein_coding|CODING|LOC_Os06g14080.1|2|1) FN1680-S.SNP.6:7852832 chr06:007852832 0 W/7852832-7852832 FN1680-S SNP A -> T AC=1;AN=188;BQB=0.00271815;DP=3799;DP4=1845,1893,23,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36195e-17;MQSB=0.829771;RPB=0.33175;SGB=-246.934;VDB=0.140333;EFF=INTRON(MODIFIER||||608|LOC_Os06g14080|protein_coding|CODING|LOC_Os06g14080.1|2|1) FN2671-S.SNP.6:7855567 chr06:007855567 0 W/7855567-7855567 FN2671-S SNP G -> A AC=1;AN=200;BQB=0.828823;DP=4716;DP4=2268,2162,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212044;MQB=3.85405e-08;MQSB=0.0654555;RPB=0.932713;SGB=63.4749;VDB=0.381728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R76Q|167|LOC_Os06g14090|protein_coding|CODING|LOC_Os06g14090.1|1|1) FN3687-S.SNP.6:7855982 chr06:007855982 0 W/7855982-7855982 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.99423;DP=2226;DP4=1327,816,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34825e-06;MQSB=0.483015;RPB=0.996822;SGB=10.8904;VDB=0.286863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.6:7858552 chr06:007858552 0 W/7858552-7858552 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.0297724;DP=3771;DP4=1954,1778,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.83261e-06;MQSB=0.964522;RPB=0.804733;SGB=-77.5087;VDB=0.187308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.6:7862343 chr06:007862343 0 W/7862343-7862343 FN2372 SNP C -> T AC=2;AN=192;BQB=0.300468;DP=1018;DP4=90,819,2,9;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0108055;MQB=0.511421;MQSB=1.05306e-13;RPB=0.49929;SGB=13.5279;VDB=0.399878;EFF=INTRON(MODIFIER||||1131|LOC_Os06g14100|protein_coding|CODING|LOC_Os06g14100.1|7|1) FN416-S.SNP.6:7865703 chr06:007865703 0 W/7865703-7865703 FN416-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14100 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN585-S.SNP.6:7887937 chr06:007887937 0 W/7887937-7887937 FN585-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g14140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1072-S.SNP.6:7888459 chr06:007888459 0 W/7888459-7888459 FN1072-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2358.SNP.6:7888926 chr06:007888926 0 W/7888926-7888926 FN2358 SNP C -> T AC=1;AN=192;BQB=0.999961;DP=4688;DP4=2195,2155,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000213311;MQB=2.72473e-06;MQSB=0.631824;RPB=0.755267;SGB=25.5227;VDB=0.99708;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T271|1986|LOC_Os06g14140|protein_coding|CODING|LOC_Os06g14140.1|1|1) FN1470-S.SNP.6:7890957 chr06:007890957 0 W/7890957-7890957 FN1470-S Single Base Substitution G-A INTERGENIC Homo SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN549-S.SNP.6:7890957 chr06:007890957 0 W/7890957-7890957 FN549-S Single Base Substitution G-A INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN3508-S.SNP.6:7891788 chr06:007891788 0 W/7891788-7891788 FN3508-S SNP C -> T AC=1;AN=188;BQB=0.438045;DP=2516;DP4=1513,951,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0616057;MQB=0.327032;MQSB=9.19732e-17;RPB=0.639813;SGB=25.3545;VDB=0.991842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.6:7891970 chr06:007891970 0 W/7891970-7891970 FN2537-S SNP A -> G AC=1;AN=198;BQB=0.999501;DP=3385;DP4=1803,1392,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0407681;MQB=0.17211;MQSB=0.134785;RPB=0.517301;SGB=29.3443;VDB=0.250435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.6:7897050 chr06:007897050 0 W/7897050-7897050 FN3500-S SNP G -> T AC=1;AN=188;BQB=0.998769;DP=4089;DP4=1967,2055,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.110785;MQB=0.609506;MQSB=5.1641e-39;RPB=0.44098;SGB=58.0655;VDB=0.649456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1412H|1601|LOC_Os06g14160|protein_coding|CODING|LOC_Os06g14160.1|4|1) FN3994-S.SNP.6:7902220 chr06:007902220 0 W/7902220-7902220 FN3994-S SNP G -> A AC=1;AN=168;BQB=0.662411;DP=2526;DP4=1263,1166,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.83489e-08;MQSB=0.974669;RPB=0.752912;SGB=45.0404;VDB=0.248415;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.6:7905511 chr06:007905511 0 W/7905511-7905511 FN-13 Single Base Substitution T-C INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN2412.SNP.6:7907989 chr06:007907989 0 W/7907989-7907989 FN2412 SNP T -> G AC=1;AN=200;BQB=0.313009;DP=4783;DP4=2063,2399,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.28927e-14;MQSB=0.720595;RPB=0.245985;SGB=69.1109;VDB=0.211774;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.6:7910883 chr06:007910883 0 W/7910883-7910883 FN_812-4-1 Single Base Substitution C-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN3626-S.SNP.6:7916492 chr06:007916492 0 W/7916492-7916492 FN3626-S SNP T -> A AC=2;AN=190;BQB=0.76515;DP=2182;DP4=1232,756,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.17856e-15;MQSB=0.596733;RPB=0.991869;SGB=18.096;VDB=0.466939;EFF=UTR_3_PRIME(MODIFIER||77||274|LOC_Os06g14180|protein_coding|CODING|LOC_Os06g14180.1|1|1) FN2701-S.SNP.6:7919247 chr06:007919247 0 W/7919247-7919247 FN2701-S SNP T -> A AC=1;AN=200;BQB=0.797908;DP=5013;DP4=2700,2092,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24634e-10;MQSB=0.908269;RPB=0.714988;SGB=54.6902;VDB=0.442373;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.6:7928028 chr06:007928028 0 W/7928028-7928028 FN-154 Single Base Substitution C-T INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3530-S.SNP.6:7931432 chr06:007931432 0 W/7931432-7931432 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.900478;DP=3031;DP4=1397,1539,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.95141e-06;MQSB=0.817614;RPB=0.450028;SGB=71.6954;VDB=0.858675;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.6:7936068 chr06:007936068 0 W/7936068-7936068 FN3430-S SNP G -> A AC=2;AN=184;BQB=0.74441;DP=2622;DP4=1315,1223,4,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23816e-05;MQSB=0.943194;RPB=0.869434;SGB=48.7425;VDB=0.748037;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.6:7940205 chr06:007940205 0 W/7940205-7940205 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.956083;DP=2886;DP4=1426,1370,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05364e-05;MQSB=0.999888;RPB=0.971;SGB=35.4339;VDB=0.922502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.6:7949681 chr06:007949681 0 W/7949681-7949681 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.963789;DP=4771;DP4=2406,2131,7,5;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.360511;MQB=0.269271;MQSB=1.84228e-08;RPB=0.153875;SGB=49.6594;VDB=0.0260491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R473H|1600|LOC_Os06g14250|protein_coding|CODING|LOC_Os06g14250.1|1|1) W481-5-1.SNP.6:7952012 chr06:007952012 0 W/7952012-7952012 W481-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3807-S.SNP.6:7952670 chr06:007952670 0 W/7952670-7952670 FN3807-S SNP C -> A AC=1;AN=190;BQB=0.995016;DP=3300;DP4=1611,1547,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69767e-09;MQSB=0.996565;RPB=0.973154;SGB=46.7622;VDB=0.921553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.6:7956690 chr06:007956690 0 W/7956690-7956690 FN3817-S SNP A -> T AC=1;AN=190;BQB=0.792863;DP=2909;DP4=1261,1533,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.45771e-05;MQSB=0.991662;RPB=0.0643208;SGB=28.9929;VDB=0.0179636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.6:7957747 chr06:007957747 0 W/7957747-7957747 FN1565-S Single Base Substitution G-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN524-S.SNP.6:7960298 chr06:007960298 0 W/7960298-7960298 FN524-S Single Base Substitution A-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN426-S.SNP.6:7963519 chr06:007963519 0 W/7963519-7963519 FN426-S Single Base Substitution C-G INTERGENIC HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3375-S.SNP.6:7982698 chr06:007982698 0 W/7982698-7982698 FN3375-S SNP C -> T AC=2;AN=184;BQB=1;DP=3075;DP4=1318,1653,16,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16557e-21;MQSB=0.994593;RPB=0.828841;SGB=78.7544;VDB=0.660731;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S205|591|LOC_Os06g14310|protein_coding|CODING|LOC_Os06g14310.1|1|1) FN3515-S.SNP.6:7988410 chr06:007988410 0 W/7988410-7988410 FN3515-S SNP C -> A AC=1;AN=188;BQB=0.887259;DP=2815;DP4=1603,1140,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.77456e-09;MQSB=0.531401;RPB=0.908546;SGB=46.6141;VDB=0.760113;EFF=INTRON(MODIFIER||||225|LOC_Os06g14324|protein_coding|CODING|LOC_Os06g14324.1|2|1) FN3629-S.SNP.6:7991278 chr06:007991278 0 W/7991278-7991278 FN3629-S SNP A -> C AC=2;AN=190;BQB=0.867453;DP=3275;DP4=1611,1380,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26241e-13;MQSB=0.982734;RPB=0.99282;SGB=126.511;VDB=0.127262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.6:7995358 chr06:007995358 0 W/7995358-7995358 FN3992-S SNP C -> T AC=1;AN=168;BQB=0.823439;DP=3192;DP4=1680,1368,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.32969e-06;MQSB=0.954152;RPB=0.356569;SGB=52.1728;VDB=0.529202;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.6:8001029 chr06:008001029 0 W/8001029-8001029 FN815-S Single Base Substitution T-C INTRON HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN2338.SNP.6:8007620 chr06:008007620 0 W/8007620-8007620 FN2338 SNP A -> T AC=1;AN=192;BQB=0.961846;DP=5295;DP4=2606,2404,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.32263e-13;MQSB=0.835582;RPB=0.941477;SGB=-100.803;VDB=0.796177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.6:8007915 chr06:008007915 0 W/8007915-8007915 FN-208 Single Base Substitution G-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2219-S.SNP.6:8010069 chr06:008010069 0 W/8010069-8010069 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.999062;DP=3714;DP4=1546,1793,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29566e-08;MQSB=0.0040392;RPB=0.234927;SGB=67.3108;VDB=0.0663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.6:8010782 chr06:008010782 0 W/8010782-8010782 FN2628-S SNP G -> C AC=1;AN=200;BQB=0.832768;DP=5215;DP4=2448,2474,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74885e-19;MQSB=0.90631;RPB=0.795156;SGB=108.768;VDB=0.927891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.6:8013584 chr06:008013584 0 W/8013584-8013584 FN1716-S SNP C -> A AC=2;AN=188;BQB=0.352919;DP=3666;DP4=1685,1913,18,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.73224e-19;MQSB=0.912793;RPB=0.928485;SGB=-384.75;VDB=0.730258;EFF=INTRON(MODIFIER||||242|LOC_Os06g14370|protein_coding|CODING|LOC_Os06g14370.1|2|1),INTRON(MODIFIER||||215|LOC_Os06g14370|protein_coding|CODING|LOC_Os06g14370.2|3|1),INTRON(MODIFIER||||172|LOC_Os06g14370|protein_coding|CODING|LOC_Os06g14370.3|2|1),INTRON(MODIFIER||||158|LOC_Os06g14370|protein_coding|CODING|LOC_Os06g14370.4|3|1) FN3512-S.SNP.6:8015309 chr06:008015309 0 W/8015309-8015309 FN3512-S SNP C -> T AC=2;AN=188;BQB=0.929683;DP=3162;DP4=1403,1668,13,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.27224e-20;MQSB=0.967621;RPB=0.77275;SGB=153.475;VDB=0.957916;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.6:8015794 chr06:008015794 0 W/8015794-8015794 FN421-S Single Base Substitution G-A INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2791-S.SNP.6:8016006 chr06:008016006 0 W/8016006-8016006 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.815226;DP=3764;DP4=1867,1692,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.48924e-11;MQSB=0.131308;RPB=0.663022;SGB=-38.26;VDB=0.562554;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.6:8021096 chr06:008021096 0 W/8021096-8021096 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN4094-S.SNP.6:8035680 chr06:008035680 0 W/8035680-8035680 FN4094-S SNP A -> T AC=1;AN=182;BQB=0.965377;DP=2577;DP4=1187,1333,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.03671e-06;MQSB=0.871787;RPB=0.517351;SGB=35.0899;VDB=0.166412;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.6:8038313 chr06:008038313 0 W/8038313-8038313 FN911-S Single Base Substitution T-A INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN4094-S.SNP.6:8067014 chr06:008067014 0 W/8067014-8067014 FN4094-S SNP T -> C AC=1;AN=182;BQB=0.999572;DP=2872;DP4=1519,1283,7,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.36848e-10;MQSB=0.247243;RPB=0.998348;SGB=56.6929;VDB=0.444117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.6:8074142 chr06:008074142 0 W/8074142-8074142 FN1499-S Single Base Substitution T-C INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2178-S.SNP.6:8080208 chr06:008080208 0 W/8080208-8080208 FN2178-S SNP G -> T AC=1;AN=168;BQB=0.481953;DP=2716;DP4=1716,950,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0231959;MQB=0.109864;MQSB=0.929669;RPB=0.659573;SGB=-17.0958;VDB=0.366444;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.6:8084454 chr06:008084454 0 W/8084454-8084454 FN-210 Single Base Substitution A-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3390-S.SNP.6:8086312 chr06:008086312 0 W/8086312-8086312 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.984107;DP=2064;DP4=1258,740,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.4177e-06;MQSB=0.996448;RPB=0.797167;SGB=21.6609;VDB=0.495905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.6:8090184 chr06:008090184 0 W/8090184-8090184 FN2411 SNP G -> T AC=1;AN=200;BQB=0.731506;DP=4652;DP4=2197,2161,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.82764e-07;MQSB=0.977402;RPB=0.216226;SGB=26.8797;VDB=0.511745;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.6:8091323 chr06:008091323 0 W/8091323-8091323 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN3899-S.SNP.6:8091913 chr06:008091913 0 W/8091913-8091913 FN3899-S SNP G -> T AC=1;AN=158;BQB=0.988476;DP=2389;DP4=1178,1111,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04873e-06;MQSB=0.979982;RPB=0.797667;SGB=30.704;VDB=0.864226;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.6:8092543 chr06:008092543 0 W/8092543-8092543 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.973354;DP=2294;DP4=1105,1126,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.51687e-09;MQSB=0.999937;RPB=0.999628;SGB=65.6427;VDB=0.57367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.6:8092898 chr06:008092898 0 W/8092898-8092898 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.048328;DP=5000;DP4=2451,2368,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.83793e-07;MQSB=0.0849569;RPB=0.183797;SGB=51.0851;VDB=0.283388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.6:8095880 chr06:008095880 0 W/8095880-8095880 FN3422-S SNP T -> A AC=1;AN=184;BQB=0.864342;DP=2858;DP4=1338,1431,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.39274e-10;MQSB=0.923901;RPB=0.869416;SGB=23.2751;VDB=0.958754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.6:8100871 chr06:008100871 0 W/8100871-8100871 FN2562-S SNP A -> T AC=1;AN=198;BQB=0.49457;DP=4355;DP4=2007,2093,13,20;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.01883e-15;MQSB=0.0287238;RPB=0.988409;SGB=70.8662;VDB=0.0967478;EFF=INTRON(MODIFIER||||951|LOC_Os06g14440|protein_coding|CODING|LOC_Os06g14440.1|4|1),INTRON(MODIFIER||||946|LOC_Os06g14440|protein_coding|CODING|LOC_Os06g14440.3|3|1),INTRON(MODIFIER||||946|LOC_Os06g14440|protein_coding|CODING|LOC_Os06g14440.4|3|1) FN4093-S.SNP.6:8113518 chr06:008113518 0 W/8113518-8113518 FN4093-S SNP T -> C AC=1;AN=182;BQB=0.98708;DP=2948;DP4=1175,1701,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08861e-08;MQSB=0.999279;RPB=0.948838;SGB=62.1548;VDB=0.731126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.6:8123707 chr06:008123707 0 W/8123707-8123707 FN3667-S SNP C -> G AC=1;AN=190;BQB=0.798695;DP=2688;DP4=1297,1283,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10297e-05;MQSB=0.107691;RPB=0.985809;SGB=21.8853;VDB=0.588772;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.6:8128123 chr06:008128123 0 W/8128123-8128123 FN4163-S SNP T -> C AC=2;AN=170;BQB=0.979007;DP=2564;DP4=1185,1301,12,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.79881e-15;MQSB=0.95807;RPB=0.971944;SGB=105.627;VDB=0.547012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L153P|398|LOC_Os06g14460|protein_coding|CODING|LOC_Os06g14460.1|3|1) FN2440.SNP.6:8136425 chr06:008136425 0 W/8136425-8136425 FN2440 SNP G -> A AC=1;AN=200;BQB=0.981041;DP=4127;DP4=1885,2002,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.18881e-06;MQSB=0.976772;RPB=0.521184;SGB=54.2646;VDB=0.6928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.6:8139991 chr06:008139991 0 W/8139991-8139991 FN1420-S Single Base Substitution G-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2306.SNP.6:8142384 chr06:008142384 0 W/8142384-8142384 FN2306 SNP A -> G AC=1;AN=192;BQB=0.486223;DP=4926;DP4=2352,2161,7,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000320875;MQSB=0.989251;RPB=0.52703;SGB=10.9636;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.6:8147442 chr06:008147442 0 W/8147442-8147442 FN1532-S Single Base Substitution A-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2083-S.SNP.6:8147442 chr06:008147442 0 W/8147442-8147442 FN2083-S SNP A -> T AC=1;AN=168;BQB=0.049353;DP=4097;DP4=1849,2143,12,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000244081;MQB=1.90141e-07;MQSB=0.872198;RPB=0.451074;SGB=-216.752;VDB=0.0742803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.6:8148031 chr06:008148031 0 W/8148031-8148031 FN2540-S SNP T -> C AC=1;AN=198;BQB=0.933256;DP=3927;DP4=1924,1737,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07776e-11;MQSB=0.694057;RPB=0.0858112;SGB=39.7248;VDB=0.0029644;EFF=INTRON(MODIFIER||||140|LOC_Os06g14500|protein_coding|CODING|LOC_Os06g14500.1|2|1) FN1325-S.SNP.6:8156166 chr06:008156166 0 W/8156166-8156166 FN1325-S Single Base Substitution A-T INTRON HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1262-S.SNP.6:8161206 chr06:008161206 0 W/8161206-8161206 FN1262-S Single Base Substitution T-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN765-S.SNP.6:8173736 chr06:008173736 0 W/8173736-8173736 FN765-S Single Base Substitution G-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN765-S.SNP.6:8173737 chr06:008173737 0 W/8173737-8173737 FN765-S Single Base Substitution T-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN450-S.SNP.6:8174468 chr06:008174468 0 W/8174468-8174468 FN450-S Single Base Substitution C-G INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN759-S.SNP.6:8181415 chr06:008181415 0 W/8181415-8181415 FN759-S Single Base Substitution T-C INTRON HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN3552-S.SNP.6:8181927 chr06:008181927 0 W/8181927-8181927 FN3552-S SNP C -> T AC=2;AN=188;BQB=0.963268;DP=3006;DP4=1593,1331,13,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.15459e-15;MQSB=0.997589;RPB=0.99558;SGB=121.672;VDB=0.929294;EFF=INTRON(MODIFIER||||497|LOC_Os06g14540|protein_coding|CODING|LOC_Os06g14540.1|4|1) FN2138-S.SNP.6:8181951 chr06:008181951 0 W/8181951-8181951 FN2138-S SNP C -> A AC=1;AN=168;BQB=0.857653;DP=4210;DP4=1835,2322,17,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.39968e-19;MQSB=0.999862;RPB=0.977885;SGB=-93.1751;VDB=0.320703;EFF=INTRON(MODIFIER||||497|LOC_Os06g14540|protein_coding|CODING|LOC_Os06g14540.1|4|1) FN1292-S.SNP.6:8182240 chr06:008182240 0 W/8182240-8182240 FN1292-S Single Base Substitution C-A INTRON HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN4135-S.SNP.6:8182898 chr06:008182898 0 W/8182898-8182898 FN4135-S SNP G -> A AC=2;AN=182;BQB=0.985559;DP=3147;DP4=1454,1582,23,25;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.59861e-27;MQSB=0.908028;RPB=0.496416;SGB=211.013;VDB=0.923496;EFF=INTRON(MODIFIER||||497|LOC_Os06g14540|protein_coding|CODING|LOC_Os06g14540.1|4|1) FN2547-S.SNP.6:8186166 chr06:008186166 0 W/8186166-8186166 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.644116;DP=4224;DP4=1710,2310,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.80011e-07;MQSB=0.629604;RPB=0.44027;SGB=24.1541;VDB=0.928093;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.6:8192801 chr06:008192801 0 W/8192801-8192801 FN1639-S Single Base Substitution A-C INTERGENIC Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN911-S.SNP.6:8209580 chr06:008209580 0 W/8209580-8209580 FN911-S Single Base Substitution A-G INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN736-S.SNP.6:8209978 chr06:008209978 0 W/8209978-8209978 FN736-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN-286.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN-286 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-409.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN-409 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1534-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN1534-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2665-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.983924;DP=5337;DP4=2457,2609,17,13;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.284429;MQB=0.301951;MQSB=4.2505e-11;RPB=0.973405;SGB=132.552;VDB=0.60156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A466V|2001|LOC_Os06g14590|protein_coding|CODING|LOC_Os06g14590.1|1|1) FN3431-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN3431-S SNP C -> T AC=2;AN=184;BQB=0.820561;DP=4666;DP4=2327,2224,10,15;HOB=0.0215028;ICB=0.494625;MQ=22;MQ0F=0.330476;MQB=0.0148184;MQSB=0;RPB=0.992808;SGB=78.0093;VDB=0.163288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A466V|2001|LOC_Os06g14590|protein_coding|CODING|LOC_Os06g14590.1|1|1) FN3594-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.618577;DP=4593;DP4=2224,2290,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.348792;MQB=0.619872;MQSB=0;RPB=0.813588;SGB=71.6954;VDB=0.93025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A466V|2001|LOC_Os06g14590|protein_coding|CODING|LOC_Os06g14590.1|1|1) FN4038-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN4038-S SNP C -> T AC=1;AN=168;BQB=0.995603;DP=3737;DP4=1897,1725,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=22;MQ0F=0.323254;MQB=0.201197;MQSB=0;RPB=0.668794;SGB=86.2102;VDB=0.755853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A466V|2001|LOC_Os06g14590|protein_coding|CODING|LOC_Os06g14590.1|1|1) FN731-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN731-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN924-S.SNP.6:8212931 chr06:008212931 0 W/8212931-8212931 FN924-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g14590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2113-S.SNP.6:8233379 chr06:008233379 0 W/8233379-8233379 FN2113-S SNP T -> G AC=1;AN=168;BQB=0.00584418;DP=2986;DP4=1399,1558,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.2428;MQB=0.286951;MQSB=0;RPB=0.840266;SGB=-37.7974;VDB=0.337695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1534-S.SNP.6:8235032 chr06:008235032 0 W/8235032-8235032 FN1534-S Single Base Substitution C-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-155.SNP.6:8241095 chr06:008241095 0 W/8241095-8241095 FN-155 Single Base Substitution C-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1332-S.SNP.6:8245093 chr06:008245093 0 W/8245093-8245093 FN1332-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14650 zinc finger, C3HC4 type domain containing protein, expressed SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3778-S.SNP.6:8256427 chr06:008256427 0 W/8256427-8256427 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.428987;DP=2851;DP4=1330,1400,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0298141;MQB=1.17504e-06;MQSB=0.0377386;RPB=0.757539;SGB=67.3108;VDB=0.166738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A26V|873|LOC_Os06g14680|protein_coding|CODING|LOC_Os06g14680.1|1|1) FN1258-S.SNP.6:8256701 chr06:008256701 0 W/8256701-8256701 FN1258-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN-283.SNP.6:8256876 chr06:008256876 0 W/8256876-8256876 FN-283 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g14680 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1746-S.SNP.6:8257809 chr06:008257809 0 W/8257809-8257809 FN1746-S SNP A -> G AC=2;AN=188;BQB=0.908337;DP=3147;DP4=1533,1557,19,22;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.0181125;MQB=6.70774e-09;MQSB=0.0545822;RPB=0.994723;SGB=-46.9554;VDB=0.759232;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E257|873|LOC_Os06g14680|protein_coding|CODING|LOC_Os06g14680.1|2|1) FN3416-S.SNP.6:8264326 chr06:008264326 0 W/8264326-8264326 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.977273;DP=2836;DP4=1411,1349,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30854e-05;MQSB=0.99979;RPB=0.977551;SGB=30.6558;VDB=0.528538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.6:8284243 chr06:008284243 0 W/8284243-8284243 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.932327;DP=3947;DP4=1992,1859,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75779e-09;MQSB=0.963145;RPB=0.668031;SGB=53.3568;VDB=0.667522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.6:8293810 chr06:008293810 0 W/8293810-8293810 FN1268-S Single Base Substitution C-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2455.SNP.6:8293828 chr06:008293828 0 W/8293828-8293828 FN2455 SNP C -> T AC=1;AN=200;BQB=0.759372;DP=4806;DP4=2259,2230,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54686e-05;MQSB=0.951834;RPB=0.114947;SGB=4.67442;VDB=0.634553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.6:8308084 chr06:008308084 0 W/8308084-8308084 FN2579-S SNP G -> T AC=1;AN=198;BQB=0.998141;DP=3935;DP4=1823,1920,14,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.19037e-21;MQSB=0.994561;RPB=0.958225;SGB=68.2711;VDB=0.660721;EFF=INTRON(MODIFIER||||1376|LOC_Os06g14740|protein_coding|CODING|LOC_Os06g14740.1|19|1) FN2579-S.SNP.6:8308085 chr06:008308085 0 W/8308085-8308085 FN2579-S SNP A -> T AC=1;AN=198;BQB=0.512572;DP=3914;DP4=1745,1906,14,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.96133e-19;MQSB=0.99998;RPB=0.732496;SGB=101.266;VDB=0.507515;EFF=INTRON(MODIFIER||||1376|LOC_Os06g14740|protein_coding|CODING|LOC_Os06g14740.1|19|1) FN2377.SNP.6:8319619 chr06:008319619 0 W/8319619-8319619 FN2377 SNP T -> C AC=1;AN=192;BQB=0.829738;DP=5295;DP4=2430,2480,19,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42283e-17;MQSB=0.999386;RPB=0.985649;SGB=125.324;VDB=0.669691;EFF=INTRON(MODIFIER||||1565|LOC_Os06g14750|protein_coding|CODING|LOC_Os06g14750.1|10|1) FN3707-S.SNP.6:8332457 chr06:008332457 0 W/8332457-8332457 FN3707-S SNP A -> G AC=1;AN=190;BQB=0.996745;DP=3074;DP4=1457,1541,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.62526e-10;MQSB=0.984956;RPB=0.911474;SGB=50.3161;VDB=0.934191;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.6:8333735 chr06:008333735 0 W/8333735-8333735 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.975933;DP=2382;DP4=1106,1196,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.40535e-06;MQSB=0.993991;RPB=0.680201;SGB=21.8853;VDB=0.876592;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.6:8337778 chr06:008337778 0 W/8337778-8337778 FN406-S Single Base Substitution T-G INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN406-S.SNP.6:8338827 chr06:008338827 0 W/8338827-8338827 FN406-S Single Base Substitution A-T INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN736-S.SNP.6:8339729 chr06:008339729 0 W/8339729-8339729 FN736-S Single Base Substitution G-A INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN519-S.SNP.6:8342751 chr06:008342751 0 W/8342751-8342751 FN519-S Single Base Substitution T-G INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN2115-S.SNP.6:8345437 chr06:008345437 0 W/8345437-8345437 FN2115-S SNP A -> G AC=1;AN=168;BQB=0.379512;DP=2749;DP4=1089,1623,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.31137e-09;MQSB=0.641869;RPB=0.85405;SGB=-103.201;VDB=0.4234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.6:8349902 chr06:008349902 0 W/8349902-8349902 FN1176-S Single Base Substitution T-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1176-S.SNP.6:8349904 chr06:008349904 0 W/8349904-8349904 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3821-S.SNP.6:8350260 chr06:008350260 0 W/8350260-8350260 FN3821-S SNP A -> T AC=1;AN=190;BQB=0.967009;DP=2444;DP4=999,1368,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65228e-07;MQSB=0.996684;RPB=0.696459;SGB=44.5415;VDB=0.54425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.6:8351093 chr06:008351093 0 W/8351093-8351093 FN2667-S SNP A -> T AC=2;AN=200;BQB=0.965458;DP=5121;DP4=2782,2173,31,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.56714e-27;MQSB=0.954691;RPB=0.785626;SGB=206.235;VDB=0.77082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.6:8354613 chr06:008354613 0 W/8354613-8354613 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.619191;DP=4671;DP4=2073,2402,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32651e-08;MQSB=0.904854;RPB=0.86997;SGB=43.8747;VDB=0.328431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.6:8358187 chr06:008358187 0 W/8358187-8358187 FN2333 SNP A -> T AC=1;AN=192;BQB=0.894419;DP=5161;DP4=2498,2410,18,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000193761;MQB=4.03262e-16;MQSB=0.947614;RPB=0.60304;SGB=96.8096;VDB=0.523457;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.6:8362232 chr06:008362232 0 W/8362232-8362232 FN-365 Single Base Substitution T-C INTERGENIC HOMO SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN1376-S.SNP.6:8365562 chr06:008365562 0 W/8365562-8365562 FN1376-S Single Base Substitution C-G INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN914-S.SNP.6:8366028 chr06:008366028 0 W/8366028-8366028 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3468-S.SNP.6:8368771 chr06:008368771 0 W/8368771-8368771 FN3468-S SNP C -> A AC=1;AN=184;BQB=0.988343;DP=1779;DP4=772,919,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0039348;MQB=0.0369858;MQSB=0.00353798;RPB=0.708832;SGB=30.6558;VDB=0.0907041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.6:8374942 chr06:008374942 0 W/8374942-8374942 FN1035-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3473-S.SNP.6:8375941 chr06:008375941 0 W/8375941-8375941 FN3473-S SNP T -> C AC=2;AN=184;BQB=0.416219;DP=3668;DP4=2182,1234,23,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.8299e-15;MQSB=0.97282;RPB=0.307266;SGB=66.1455;VDB=0.603537;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L278|294|LOC_Os06g14780|protein_coding|CODING|LOC_Os06g14780.1|1|1),INTRON(MODIFIER||||282|LOC_Os06g14780|protein_coding|CODING|LOC_Os06g14780.2|1|1) FN3384-S.SNP.6:8378402 chr06:008378402 0 W/8378402-8378402 FN3384-S SNP A -> C AC=2;AN=184;BQB=0.935427;DP=2135;DP4=810,1122,4,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.91311e-07;MQSB=0.41115;RPB=0.349618;SGB=23.2751;VDB=0.777657;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.6:8379397 chr06:008379397 0 W/8379397-8379397 FN477-S Single Base Substitution T-A INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1025-S.SNP.6:8379793 chr06:008379793 0 W/8379793-8379793 FN1025-S Single Base Substitution A-G INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1089-S.SNP.6:8401859 chr06:008401859 0 W/8401859-8401859 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2246-S.SNP.6:8405974 chr06:008405974 0 W/8405974-8405974 FN2246-S SNP A -> T AC=2;AN=190;BQB=0.995628;DP=4137;DP4=2055,1630,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.26701e-16;MQSB=0.999858;RPB=0.988461;SGB=74.7373;VDB=0.321923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.6:8408988 chr06:008408988 0 W/8408988-8408988 FN1197-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g14810 3-ketoacyl-CoA synthase, putative, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1197-S.SNP.6:8409155 chr06:008409155 0 W/8409155-8409155 FN1197-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14810 3-ketoacyl-CoA synthase, putative, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3476-S.SNP.6:8418341 chr06:008418341 0 W/8418341-8418341 FN3476-S SNP G -> A AC=2;AN=184;BQB=0.891257;DP=2424;DP4=1158,1190,9,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08091e-11;MQSB=0.948855;RPB=0.564819;SGB=84.9167;VDB=0.576481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.6:8423069 chr06:008423069 0 W/8423069-8423069 FN2196-S SNP T -> A AC=2;AN=190;BQB=0.197109;DP=4671;DP4=2454,1940,34,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.40923e-26;MQSB=0.955588;RPB=0.0238114;SGB=67.8201;VDB=0.304503;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.6:8425065 chr06:008425065 0 W/8425065-8425065 FN-65 Single Base Substitution T-G INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3390-S.SNP.6:8427591 chr06:008427591 0 W/8427591-8427591 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.920168;DP=2300;DP4=941,1269,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.00111573;MQSB=0.324505;RPB=0.872794;SGB=39.699;VDB=0.539642;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.6:8429245 chr06:008429245 0 W/8429245-8429245 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.928536;DP=2544;DP4=1350,1091,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.11982e-07;MQSB=0.999999;RPB=0.993934;SGB=49.0954;VDB=0.383964;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.6:8430281 chr06:008430281 0 W/8430281-8430281 FN1745-S SNP T -> A AC=2;AN=188;BQB=0.815658;DP=1659;DP4=142,1493,1,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.56131e-07;MQSB=0.363187;RPB=0.66632;SGB=35.9843;VDB=0.469714;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.6:8431487 chr06:008431487 0 W/8431487-8431487 FN2324 SNP C -> G AC=1;AN=192;BQB=0.122817;DP=4256;DP4=1817,2185,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.000869785;MQSB=0.00166561;RPB=0.750147;SGB=28.9139;VDB=0.829451;EFF=INTRON(MODIFIER||||237|LOC_Os06g14830|protein_coding|CODING|LOC_Os06g14830.1|1|1) FN2352.SNP.6:8431632 chr06:008431632 0 W/8431632-8431632 FN2352 SNP T -> A AC=1;AN=192;BQB=0.99323;DP=4596;DP4=2271,2042,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000435161;MQB=6.34199e-09;MQSB=0.0679718;RPB=0.366135;SGB=75.4235;VDB=0.116873;EFF=INTRON(MODIFIER||||237|LOC_Os06g14830|protein_coding|CODING|LOC_Os06g14830.1|1|1) FN2352.SNP.6:8431633 chr06:008431633 0 W/8431633-8431633 FN2352 SNP G -> A AC=1;AN=192;BQB=0.791409;DP=4582;DP4=2273,2017,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000436491;MQB=6.00368e-10;MQSB=0.118287;RPB=0.202759;SGB=18.3052;VDB=0.226981;EFF=INTRON(MODIFIER||||237|LOC_Os06g14830|protein_coding|CODING|LOC_Os06g14830.1|1|1) FN2455.SNP.6:8432127 chr06:008432127 0 W/8432127-8432127 FN2455 SNP C -> T AC=1;AN=200;BQB=0.390123;DP=4307;DP4=2122,1966,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73464e-13;MQSB=0.979583;RPB=0.67353;SGB=83.5316;VDB=0.808458;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.6:8432744 chr06:008432744 0 W/8432744-8432744 FN4103-S SNP C -> T AC=2;AN=182;BQB=0.823476;DP=2836;DP4=1398,1356,9,5;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00141044;MQB=0.000215964;MQSB=7.74398e-05;RPB=0.8019;SGB=20.6332;VDB=0.0940224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1726-S.SNP.6:8447650 chr06:008447650 0 W/8447650-8447650 FN1726-S SNP C -> A AC=1;AN=188;BQB=0.998676;DP=2362;DP4=714,1557,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00042337;MQB=1.01617e-05;MQSB=0.0607336;RPB=0.991173;SGB=26.0762;VDB=0.707417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.6:8448560 chr06:008448560 0 W/8448560-8448560 FN1619-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4202-S.SNP.6:8452770 chr06:008452770 0 W/8452770-8452770 FN4202-S SNP C -> G AC=2;AN=170;BQB=0.853022;DP=1596;DP4=769,703,17,15;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=9.5396e-14;MQSB=3.8288e-06;RPB=0.901564;SGB=111.388;VDB=0.274127;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.6:8457550 chr06:008457550 0 W/8457550-8457550 FN-236 Single Base Substitution T-C INTRON HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN4249-S.SNP.6:8461024 chr06:008461024 0 W/8461024-8461024 FN4249-S SNP A -> T AC=2;AN=170;BQB=0.996283;DP=2118;DP4=875,1145,10,19;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.000472144;MQB=4.74936e-15;MQSB=0.0233965;RPB=0.487609;SGB=-10.3498;VDB=0.871844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.6:8462937 chr06:008462937 0 W/8462937-8462937 FN2184-S SNP G -> A AC=1;AN=190;BQB=0.971994;DP=4810;DP4=2201,2274,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.0002079;MQB=1.29927e-14;MQSB=0.167991;RPB=0.774498;SGB=78.7471;VDB=0.705613;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.6:8464333 chr06:008464333 0 W/8464333-8464333 FN351-S Single Base Substitution C-T INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2322.SNP.6:8466900 chr06:008466900 0 W/8466900-8466900 FN2322 SNP T -> A AC=2;AN=192;BQB=0.88834;DP=4992;DP4=2324,2360,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.39397e-25;MQSB=0.956176;RPB=0.772559;SGB=105.844;VDB=0.0501219;EFF=INTERGENIC(MODIFIER||||||||||1) FN-330.SNP.6:8470777 chr06:008470777 0 W/8470777-8470777 FN-330 Single Base Substitution A-G INTRON HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN3064-S.SNP.6:8471915 chr06:008471915 0 W/8471915-8471915 FN3064-S SNP T -> A AC=2;AN=184;BQB=0.881558;DP=2646;DP4=1109,1391,9,13;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0;MQB=3.91319e-10;MQSB=0.950619;RPB=0.302584;SGB=67.4439;VDB=0.668852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2257-S.SNP.6:8472299 chr06:008472299 0 W/8472299-8472299 FN2257-S SNP C -> T AC=2;AN=190;BQB=0.990431;DP=2129;DP4=566,1314,11,18;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00140911;MQB=3.08202e-06;MQSB=5.60519e-45;RPB=0.700307;SGB=59.414;VDB=0.228951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.6:8472569 chr06:008472569 0 W/8472569-8472569 FN2348 SNP T -> C AC=1;AN=192;BQB=0.0210929;DP=3550;DP4=1383,1418,7,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00028169;MQB=0.000392474;MQSB=1.49846e-13;RPB=0.897019;SGB=-210.168;VDB=0.0664102;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.6:8475776 chr06:008475776 0 W/8475776-8475776 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.893172;DP=4768;DP4=2411,2054,21,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.79737e-14;MQSB=0.732941;RPB=0.569408;SGB=65.9573;VDB=0.287232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.6:8479319 chr06:008479319 0 W/8479319-8479319 FN3450-S SNP T -> C AC=1;AN=184;BQB=0.889288;DP=3163;DP4=1623,1418,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.4962e-12;MQSB=0.975166;RPB=0.356691;SGB=43.4494;VDB=0.461741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.6:8479831 chr06:008479831 0 W/8479831-8479831 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.984981;DP=2239;DP4=1075,1081,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000893256;MQB=0.000152654;MQSB=0.9344;RPB=0.281437;SGB=26.3271;VDB=0.11383;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.6:8480715 chr06:008480715 0 W/8480715-8480715 FN739-S Single Base Substitution A-T INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1124-S.SNP.6:8491972 chr06:008491972 0 W/8491972-8491972 FN1124-S Single Base Substitution T-A INTRON HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN509-S.SNP.6:8495210 chr06:008495210 0 W/8495210-8495210 FN509-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g14980 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2666-S.SNP.6:8495887 chr06:008495887 0 W/8495887-8495887 FN2666-S SNP G -> T AC=1;AN=200;BQB=0.888252;DP=5497;DP4=2634,2579,7,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00654903;MQB=2.84893e-06;MQSB=8.0798e-05;RPB=0.922998;SGB=54.2646;VDB=0.240536;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.6:8500237 chr06:008500237 0 W/8500237-8500237 FN523-S Single Base Substitution C-A INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.6:8500237 chr06:008500237 0 W/8500237-8500237 FN532-S Single Base Substitution C-A INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3324-S.SNP.6:8501113 chr06:008501113 0 W/8501113-8501113 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.884892;DP=2825;DP4=1378,1378,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0251327;MQB=0.0597862;MQSB=0.0213704;RPB=0.883018;SGB=14.6182;VDB=0.377633;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.6:8511332 chr06:008511332 0 W/8511332-8511332 FN1356-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g15020 3-ketoacyl-CoA synthase, putative, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3421-S.SNP.6:8516138 chr06:008516138 0 W/8516138-8516138 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.998119;DP=2520;DP4=1367,1076,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.15379e-07;MQSB=0.997937;RPB=0.388305;SGB=53.2642;VDB=0.574591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.6:8519236 chr06:008519236 0 W/8519236-8519236 FN2670-S SNP C -> G AC=1;AN=200;BQB=0.617029;DP=4871;DP4=2274,2320,11,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00385744;MQSB=0.898558;RPB=0.00121974;SGB=47.4799;VDB=0.0446866;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.6:8526061 chr06:008526061 0 W/8526061-8526061 FN4312-S SNP G -> C AC=1;AN=170;BQB=0.999072;DP=2183;DP4=1005,1099,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=7.86523e-05;MQSB=0.232499;RPB=0.595727;SGB=38.987;VDB=0.799415;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.6:8526061 chr06:008526061 0 W/8526061-8526061 FN524-S Single Base Substitution G-C INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN828-S.SNP.6:8526061 chr06:008526061 0 W/8526061-8526061 FN828-S Single Base Substitution G-C INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN1411-S.SNP.6:8528860 chr06:008528860 0 W/8528860-8528860 FN1411-S Single Base Substitution G-C INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2358.SNP.6:8534203 chr06:008534203 0 W/8534203-8534203 FN2358 SNP C -> T AC=1;AN=192;BQB=0.474802;DP=3372;DP4=1584,1468,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.000104865;MQSB=4.40519e-07;RPB=0.738045;SGB=44.6462;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.6:8535685 chr06:008535685 0 W/8535685-8535685 FN2678-S SNP T -> G AC=2;AN=200;BQB=0.859549;DP=4484;DP4=2060,2202,18,18;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0;MQB=1.00918e-08;MQSB=0.000141826;RPB=0.955928;SGB=160.183;VDB=0.900009;EFF=INTRON(MODIFIER||||322|LOC_Os06g15060|protein_coding|CODING|LOC_Os06g15060.1|3|1) FN2151-S.SNP.6:8552483 chr06:008552483 0 W/8552483-8552483 FN2151-S SNP G -> A AC=1;AN=168;BQB=0.127461;DP=3124;DP4=2159,916,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000960307;MQB=0.00260305;MQSB=0.104662;RPB=0.333524;SGB=1.32906;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.6:8559051 chr06:008559051 0 W/8559051-8559051 FN469-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g15100 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2609-S.SNP.6:8561668 chr06:008561668 0 W/8561668-8561668 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.909471;DP=3683;DP4=1738,1626,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.00515884;MQB=0.0473445;MQSB=1.31552e-32;RPB=0.385266;SGB=65.3149;VDB=0.622865;EFF=INTRON(MODIFIER||||1086|LOC_Os06g15100|protein_coding|CODING|LOC_Os06g15100.1|4|1) FN-190.SNP.6:8562372 chr06:008562372 0 W/8562372-8562372 FN-190 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g15100 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN4141-S.SNP.6:8563189 chr06:008563189 0 W/8563189-8563189 FN4141-S SNP G -> A AC=2;AN=170;BQB=0.5817;DP=2521;DP4=1198,1228,27,10;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00158667;MQB=9.09559e-10;MQSB=0.794989;RPB=0.802302;SGB=158.938;VDB=0.364982;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.6:8564446 chr06:008564446 0 W/8564446-8564446 FN-175 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os06g15110 retrotransposon protein, putative, unclassified, expressed SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3547-S.SNP.6:8565772 chr06:008565772 0 W/8565772-8565772 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.996357;DP=3164;DP4=1302,1778,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03651e-06;MQSB=0.971521;RPB=0.653259;SGB=53.5223;VDB=0.330822;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R102H|557|LOC_Os06g15110|protein_coding|CODING|LOC_Os06g15110.1|2|1) FN244-S.SNP.6:8570145 chr06:008570145 0 W/8570145-8570145 FN244-S Single Base Substitution C-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN962-S.SNP.6:8575917 chr06:008575917 0 W/8575917-8575917 FN962-S Single Base Substitution T-G INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3474-S.SNP.6:8577757 chr06:008577757 0 W/8577757-8577757 FN3474-S SNP A -> T AC=1;AN=184;BQB=0.990755;DP=3102;DP4=1787,1168,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0367505;MQB=0.0541268;MQSB=0.000120909;RPB=0.67986;SGB=33.3622;VDB=0.527851;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.6:8577919 chr06:008577919 0 W/8577919-8577919 FN598-S Single Base Substitution A-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN883-S.SNP.6:8584180 chr06:008584180 0 W/8584180-8584180 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1335-S.SNP.6:8585541 chr06:008585541 0 W/8585541-8585541 FN1335-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g15150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN-283.SNP.6:8587358 chr06:008587358 0 W/8587358-8587358 FN-283 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g15150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN4231-S.SNP.6:8588972 chr06:008588972 0 W/8588972-8588972 FN4231-S SNP C -> T AC=1;AN=170;BQB=0.982456;DP=2396;DP4=1026,1312,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.00542571;MQB=0.0045828;MQSB=0.224341;RPB=0.973004;SGB=38.987;VDB=0.568714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A211T|1407|LOC_Os06g15150|protein_coding|CODING|LOC_Os06g15150.1|3|1) FN2297.SNP.6:8590994 chr06:008590994 0 W/8590994-8590994 FN2297 SNP A -> G AC=1;AN=192;BQB=0.999681;DP=4487;DP4=2023,2130,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0407845;MQB=0.326309;MQSB=0;RPB=0.648827;SGB=-9.12519;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.6:8592373 chr06:008592373 0 W/8592373-8592373 FN2619-S SNP G -> C AC=1;AN=198;BQB=0.357242;DP=3185;DP4=1761,1173,21,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000313972;MQB=6.2679e-11;MQSB=0.00610213;RPB=0.511029;SGB=101.266;VDB=0.911406;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.6:8593654 chr06:008593654 0 W/8593654-8593654 FN1247-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN2196-S.SNP.6:8593654 chr06:008593654 0 W/8593654-8593654 FN2196-S SNP G -> A AC=2;AN=190;BQB=0.932766;DP=4735;DP4=2110,2200,36,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.42194e-39;MQSB=0.979321;RPB=0.853115;SGB=192.1;VDB=0.292767;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.6:8593654 chr06:008593654 0 W/8593654-8593654 FN3828-S SNP G -> A AC=2;AN=190;BQB=0.994485;DP=1985;DP4=552,1350,3,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.28123e-10;MQSB=0.601275;RPB=0.48021;SGB=46.7622;VDB=0.223321;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.6:8593654 chr06:008593654 0 W/8593654-8593654 FN997-S Single Base Substitution G-A INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3824-S.SNP.6:8607318 chr06:008607318 0 W/8607318-8607318 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.999109;DP=2385;DP4=1112,1199,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0503145;MQB=0.953455;MQSB=0.000124441;RPB=0.548502;SGB=43.2083;VDB=0.941142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P376S|759|LOC_Os06g15190|protein_coding|CODING|LOC_Os06g15190.1|1|1) FN3848-S.SNP.6:8609315 chr06:008609315 0 W/8609315-8609315 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.793108;DP=2329;DP4=1280,953,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.126664;MQB=0.891313;MQSB=0;RPB=0.568477;SGB=28.5576;VDB=0.650456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN2108-S SNP T -> G AC=1;AN=168;BQB=0.858395;DP=3947;DP4=1790,2107,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.102356;MQB=0.991983;MQSB=0.323061;RPB=0.950525;SGB=61.0778;VDB=0.095618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN2767-S SNP T -> G AC=1;AN=198;BQB=0.477441;DP=4535;DP4=2229,2096,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0246968;MQB=0.0733501;MQSB=3.93999e-07;RPB=0.696649;SGB=86.3098;VDB=0.354443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN3287-S SNP T -> G AC=2;AN=184;BQB=0.483294;DP=3246;DP4=1898,1208,20,20;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.0378928;MQB=0.11855;MQSB=9.73292e-11;RPB=0.999533;SGB=130.836;VDB=0.750702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN3472-S SNP T -> G AC=1;AN=184;BQB=0.978283;DP=3095;DP4=1732,1250,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0432956;MQB=0.158923;MQSB=1.54311e-06;RPB=0.930126;SGB=71.3514;VDB=0.372961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN3854-S SNP T -> G AC=1;AN=158;BQB=0.988569;DP=2526;DP4=1426,988,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.043943;MQB=0.101253;MQSB=6.05435e-05;RPB=0.0812492;SGB=90.7616;VDB=0.272946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4099-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN4099-S SNP T -> G AC=2;AN=182;BQB=0.99527;DP=3165;DP4=1672,1395,19,14;HOB=0.0217365;ICB=0.494567;MQ=41;MQ0F=0.0350711;MQB=0.000456281;MQSB=9.80019e-11;RPB=0.273205;SGB=143.35;VDB=0.353698;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN4147-S SNP T -> G AC=2;AN=170;BQB=0.695824;DP=2552;DP4=1386,1070,14,11;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0434953;MQB=0.18616;MQSB=3.1401e-06;RPB=0.842897;SGB=105.627;VDB=0.631316;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN522-S Single Base Substitution T-G INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN729-S.SNP.6:8615563 chr06:008615563 0 W/8615563-8615563 FN729-S Single Base Substitution T-G INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1272-S.SNP.6:8616303 chr06:008616303 0 W/8616303-8616303 FN1272-S Single Base Substitution G-C INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN441-S.SNP.6:8619271 chr06:008619271 0 W/8619271-8619271 FN441-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3772-S.SNP.6:8619863 chr06:008619863 0 W/8619863-8619863 FN3772-S SNP T -> C AC=2;AN=190;BQB=0.610936;DP=2325;DP4=1315,949,8,4;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00602151;MQB=0.00122766;MQSB=0.0717211;RPB=0.764728;SGB=49.0954;VDB=0.235908;EFF=INTRON(MODIFIER||||124|LOC_Os06g15210|protein_coding|CODING|LOC_Os06g15210.1|1|1) FN2091-S.SNP.6:8620211 chr06:008620211 0 W/8620211-8620211 FN2091-S SNP T -> A AC=1;AN=168;BQB=0.226339;DP=4806;DP4=2229,2532,14,16;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00104037;MQB=2.60106e-07;MQSB=0;RPB=0.800903;SGB=58.647;VDB=0.475893;EFF=INTRON(MODIFIER||||124|LOC_Os06g15210|protein_coding|CODING|LOC_Os06g15210.1|1|1) FN549-S.SNP.6:8621747 chr06:008621747 0 W/8621747-8621747 FN549-S Single Base Substitution T-C INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2265-S.SNP.6:8621751 chr06:008621751 0 W/8621751-8621751 FN2265-S SNP A -> T AC=1;AN=190;BQB=0.934705;DP=4840;DP4=2441,2156,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.54828e-06;MQSB=0.935193;RPB=0.93684;SGB=53.6492;VDB=0.272882;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.6:8622029 chr06:008622029 0 W/8622029-8622029 FN491-S Single Base Substitution G-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN3751-S.SNP.6:8625856 chr06:008625856 0 W/8625856-8625856 FN3751-S SNP C -> T AC=2;AN=190;BQB=0.998898;DP=2809;DP4=1277,1377,12,10;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0145959;MQB=0.975612;MQSB=1.97592e-06;RPB=0.794129;SGB=94.6341;VDB=0.890234;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.6:8626544 chr06:008626544 0 W/8626544-8626544 FN807-S Single Base Substitution C-T INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN443-S.SNP.6:8629947 chr06:008629947 0 W/8629947-8629947 FN443-S Single Base Substitution C-G INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN1156-XA21.SNP.6:8631280 chr06:008631280 0 W/8631280-8631280 FN1156-XA21 Single Base Substitution G-A INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.6:8631282 chr06:008631282 0 W/8631282-8631282 FN1156-XA21 Single Base Substitution G-A INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1104-S.SNP.6:8631361 chr06:008631361 0 W/8631361-8631361 FN1104-S Single Base Substitution G-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2791-S.SNP.6:8643911 chr06:008643911 0 W/8643911-8643911 FN2791-S SNP G -> T AC=1;AN=198;BQB=0.714053;DP=4601;DP4=2065,2276,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2929e-05;MQSB=0.999926;RPB=0.997934;SGB=6.15916;VDB=0.834954;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.6:8644248 chr06:008644248 0 W/8644248-8644248 FN456-S Single Base Substitution A-T INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN4024-S.SNP.6:8644602 chr06:008644602 0 W/8644602-8644602 FN4024-S SNP G -> A AC=1;AN=168;BQB=0.950532;DP=2425;DP4=1201,1132,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=0.00609512;MQSB=0.769581;RPB=0.934463;SGB=38.8805;VDB=0.868818;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.6:8644756 chr06:008644756 0 W/8644756-8644756 FN584-S Single Base Substitution C-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1170-S.SNP.6:8671427 chr06:008671427 0 W/8671427-8671427 FN1170-S Single Base Substitution T-C INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3418-S.SNP.6:8676895 chr06:008676895 0 W/8676895-8676895 FN3418-S SNP T -> A AC=1;AN=184;BQB=0.323502;DP=4123;DP4=1953,1957,11,1;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0147951;MQB=0.981153;MQSB=2.88236e-12;RPB=0.874708;SGB=32.2261;VDB=0.919643;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.6:8679776 chr06:008679776 0 W/8679776-8679776 FN2458 SNP A -> C AC=1;AN=200;BQB=0.0823698;DP=3209;DP4=656,1684,15,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00218136;MQB=2.90431e-05;MQSB=0.004197;RPB=0.574525;SGB=-421.05;VDB=0.126494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.6:8700071 chr06:008700071 0 W/8700071-8700071 FN3450-S SNP A -> T AC=1;AN=184;BQB=0.992997;DP=2619;DP4=1492,1070,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0431462;MQB=0.296509;MQSB=2.5868e-08;RPB=0.815791;SGB=48.7425;VDB=0.98845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.6:8700362 chr06:008700362 0 W/8700362-8700362 FN2122-S SNP G -> T AC=1;AN=168;BQB=0.583406;DP=4350;DP4=2379,1928,20,12;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.129885;MQB=0.221444;MQSB=9.65881e-34;RPB=0.848774;SGB=63.5086;VDB=0.312789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.6:8704330 chr06:008704330 0 W/8704330-8704330 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.18351;DP=2982;DP4=1005,1941,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.68537e-05;MQSB=0.916181;RPB=0.965568;SGB=-17.0958;VDB=0.201504;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.6:8704932 chr06:008704932 0 W/8704932-8704932 FN919-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2430.SNP.6:8705412 chr06:008705412 0 W/8705412-8705412 FN2430 SNP C -> T AC=2;AN=200;BQB=0.202495;DP=3322;DP4=1679,1309,23,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.0478e-14;MQSB=0.714765;RPB=0.594397;SGB=38.383;VDB=0.479753;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A172|448|LOC_Os06g15330|protein_coding|CODING|LOC_Os06g15330.1|1|1) FN-350.SNP.6:8706715 chr06:008706715 0 W/8706715-8706715 FN-350 Single Base Substitution G-C UTR_3_PRIME HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1563-S.SNP.6:8712959 chr06:008712959 0 W/8712959-8712959 FN1563-S Single Base Substitution G-A INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3793-S.SNP.6:8720136 chr06:008720136 0 W/8720136-8720136 FN3793-S SNP T -> A AC=2;AN=190;BQB=0.67381;DP=2363;DP4=1065,1166,9,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.84415e-05;MQSB=0.122541;RPB=0.280075;SGB=21.1058;VDB=0.268132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.6:8720136 chr06:008720136 0 W/8720136-8720136 FN3968-S SNP T -> A AC=1;AN=168;BQB=0.958729;DP=2249;DP4=977,1106,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000232712;MQSB=0.0482406;RPB=0.715539;SGB=21.0249;VDB=0.492004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.6:8724237 chr06:008724237 0 W/8724237-8724237 FN2482 SNP A -> G AC=1;AN=200;BQB=0.99828;DP=4853;DP4=2038,2481,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99092e-06;MQSB=0.996471;RPB=0.991963;SGB=24.2746;VDB=0.656764;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E197G|413|LOC_Os06g15360|protein_coding|CODING|LOC_Os06g15360.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E197G|367|LOC_Os06g15360|protein_coding|CODING|LOC_Os06g15360.4|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E196G|412|LOC_Os06g15360|protein_coding|CODING|LOC_Os06g15360.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E152G|368|LOC_Os06g15360|protein_coding|CODING|LOC_Os06g15360.3|6|1) FN2139-S.SNP.6:8727930 chr06:008727930 0 W/8727930-8727930 FN2139-S SNP C -> T AC=1;AN=168;BQB=0.919796;DP=3610;DP4=1886,1676,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.000419921;MQSB=0.993551;RPB=0.941754;SGB=5.62151;VDB=0.697992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.6:8730282 chr06:008730282 0 W/8730282-8730282 FN2165-S SNP A -> T AC=1;AN=168;BQB=0.000144026;DP=3386;DP4=1623,1714,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.32414e-09;MQSB=0.99226;RPB=0.849518;SGB=-71.2065;VDB=0.992922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.6:8733118 chr06:008733118 0 W/8733118-8733118 FN2545-S SNP C -> T AC=1;AN=198;BQB=0.887513;DP=4263;DP4=2056,1883,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13522e-07;MQSB=0.810056;RPB=0.970563;SGB=32.9588;VDB=0.877688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.6:8735457 chr06:008735457 0 W/8735457-8735457 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.343571;DP=4766;DP4=2275,2247,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020982;MQB=5.2861e-09;MQSB=0.641999;RPB=0.652732;SGB=58.8698;VDB=0.694132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.6:8735655 chr06:008735655 0 W/8735655-8735655 FN2735-S SNP G -> T AC=2;AN=200;BQB=0.850499;DP=5030;DP4=2336,2438,17,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.79026e-21;MQSB=0.750086;RPB=0.872022;SGB=89.4038;VDB=0.54896;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.6:8735655 chr06:008735655 0 W/8735655-8735655 FN4041-S SNP G -> T AC=2;AN=168;BQB=0.885015;DP=2868;DP4=1227,1459,14,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.36977e-14;MQSB=0.922207;RPB=0.671052;SGB=61.0778;VDB=0.156274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.6:8748807 chr06:008748807 0 W/8748807-8748807 FN1309-S Single Base Substitution C-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3434-S.SNP.6:8750805 chr06:008750805 0 W/8750805-8750805 FN3434-S SNP A -> G AC=1;AN=184;BQB=0.971361;DP=2987;DP4=1540,1274,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45883e-09;MQSB=0.972093;RPB=0.999953;SGB=71.3514;VDB=0.917946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.6:8762780 chr06:008762780 0 W/8762780-8762780 FN4235-S SNP A -> T AC=1;AN=170;BQB=0.96594;DP=2281;DP4=1253,933,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.45981e-06;MQSB=0.985763;RPB=0.563589;SGB=27.9928;VDB=0.923652;EFF=INTRON(MODIFIER||||591|LOC_Os06g15420|protein_coding|CODING|LOC_Os06g15420.1|4|1) FN2129-S.SNP.6:8763018 chr06:008763018 0 W/8763018-8763018 FN2129-S SNP C -> A AC=1;AN=168;BQB=0.581086;DP=4192;DP4=1940,2191,25,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44536e-23;MQSB=0.999272;RPB=0.99935;SGB=48.546;VDB=0.183947;EFF=INTRON(MODIFIER||||591|LOC_Os06g15420|protein_coding|CODING|LOC_Os06g15420.1|4|1) FN3838-S.SNP.6:8763746 chr06:008763746 0 W/8763746-8763746 FN3838-S SNP A -> G AC=1;AN=190;BQB=0.989615;DP=2745;DP4=1388,1201,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19393e-06;MQSB=0.99929;RPB=0.0112107;SGB=44.5415;VDB=0.00595712;EFF=INTRON(MODIFIER||||591|LOC_Os06g15420|protein_coding|CODING|LOC_Os06g15420.1|3|1) W475-4-2.SNP.6:8765906 chr06:008765906 0 W/8765906-8765906 W475-4-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN2797-S.SNP.6:8772049 chr06:008772049 0 W/8772049-8772049 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.619491;DP=4031;DP4=1867,1919,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07558e-08;MQSB=0.930218;RPB=0.987547;SGB=18.9639;VDB=0.175842;EFF=INTRON(MODIFIER||||119|LOC_Os06g15440|protein_coding|CODING|LOC_Os06g15440.1|1|1) FN1162-S.SNP.6:8776654 chr06:008776654 0 W/8776654-8776654 FN1162-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN2102-S.SNP.6:8778360 chr06:008778360 0 W/8778360-8778360 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.940132;DP=3368;DP4=1565,1758,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.027019;MQB=5.8461e-05;MQSB=1.41539e-30;RPB=0.514148;SGB=-41.2125;VDB=0.127862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P385S|1005|LOC_Os06g15460|protein_coding|CODING|LOC_Os06g15460.1|3|1) FN2102-S.SNP.6:8778361 chr06:008778361 0 W/8778361-8778361 FN2102-S SNP G -> T AC=1;AN=168;BQB=0.135201;DP=3352;DP4=1558,1744,10,18;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0265513;MQB=6.06899e-07;MQSB=1.80956e-30;RPB=0.442619;SGB=-173.189;VDB=0.13658;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V384|1005|LOC_Os06g15460|protein_coding|CODING|LOC_Os06g15460.1|3|1) FN-305.SNP.6:8782152 chr06:008782152 0 W/8782152-8782152 FN-305 Single Base Substitution G-A INTRON HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1460-S.SNP.6:8783323 chr06:008783323 0 W/8783323-8783323 FN1460-S Single Base Substitution T-A INTRON HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3452-S.SNP.6:8786279 chr06:008786279 0 W/8786279-8786279 FN3452-S SNP G -> T AC=1;AN=184;BQB=0.961387;DP=2911;DP4=1358,1486,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.86696e-07;MQSB=0.957954;RPB=0.569089;SGB=39.699;VDB=0.0971011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A338D|385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A338D|385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.2|9|1),SPLICE_SITE_REGION(LOW||||385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.1|10|1),SPLICE_SITE_REGION(LOW||||385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.2|9|1) FN2150-S.SNP.6:8787552 chr06:008787552 0 W/8787552-8787552 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.484993;DP=2961;DP4=1420,1491,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.33309e-09;MQSB=0.449609;RPB=0.808534;SGB=29.4772;VDB=0.892877;EFF=INTRON(MODIFIER||||385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.1|5|1),INTRON(MODIFIER||||385|LOC_Os06g15480|protein_coding|CODING|LOC_Os06g15480.2|4|1) FN3795-S.SNP.6:8788729 chr06:008788729 0 W/8788729-8788729 FN3795-S SNP C -> G AC=2;AN=190;BQB=0.475852;DP=3178;DP4=1232,1762,12,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.45083e-12;MQSB=0.316469;RPB=0.363614;SGB=135.619;VDB=0.440255;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.6:8791176 chr06:008791176 0 W/8791176-8791176 FN1153-S Single Base Substitution A-G INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1435-S.SNP.6:8791176 chr06:008791176 0 W/8791176-8791176 FN1435-S Single Base Substitution A-G INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN-187.SNP.6:8800591 chr06:008800591 0 W/8800591-8800591 FN-187 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1084-S.SNP.6:8800591 chr06:008800591 0 W/8800591-8800591 FN1084-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN468-S.SNP.6:8800591 chr06:008800591 0 W/8800591-8800591 FN468-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3821-S.SNP.6:8803940 chr06:008803940 0 W/8803940-8803940 FN3821-S SNP C -> G AC=1;AN=190;BQB=0.982553;DP=5804;DP4=2717,2892,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.164886;MQB=0.108607;MQSB=9.49071e-15;RPB=0.207202;SGB=46.7622;VDB=0.545083;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L192|311|LOC_Os06g15520|protein_coding|CODING|LOC_Os06g15520.1|1|1) FN2657-S.SNP.6:8814749 chr06:008814749 0 W/8814749-8814749 FN2657-S SNP T -> C AC=1;AN=200;BQB=0.982551;DP=5311;DP4=2443,2634,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.87514e-18;MQSB=0.358895;RPB=0.430167;SGB=73.7728;VDB=0.484945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.6:8814958 chr06:008814958 0 W/8814958-8814958 FN2326 SNP T -> A AC=1;AN=192;BQB=0.984847;DP=4993;DP4=2571,2111,24,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.09791e-20;MQSB=0.995741;RPB=0.980339;SGB=121.76;VDB=0.148633;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.6:8819379 chr06:008819379 0 W/8819379-8819379 FN1176-S Single Base Substitution C-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN964-S.SNP.6:8819642 chr06:008819642 0 W/8819642-8819642 FN964-S Single Base Substitution G-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-228.SNP.6:8819816 chr06:008819816 0 W/8819816-8819816 FN-228 Single Base Substitution A-G INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN846-S.SNP.6:8823064 chr06:008823064 0 W/8823064-8823064 FN846-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g15550 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2650-S.SNP.6:8835209 chr06:008835209 0 W/8835209-8835209 FN2650-S SNP A -> T AC=1;AN=200;BQB=0.872373;DP=4781;DP4=2356,2211,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15756e-10;MQSB=0.92519;RPB=0.907966;SGB=54.6902;VDB=0.27561;EFF=INTRON(MODIFIER||||76|LOC_Os06g15590|protein_coding|CODING|LOC_Os06g15590.1|2|1) FN2302.SNP.6:8837859 chr06:008837859 0 W/8837859-8837859 FN2302 SNP C -> T AC=1;AN=192;BQB=0.028857;DP=4733;DP4=2133,2251,14,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.32916e-21;MQSB=0.887626;RPB=0.565345;SGB=32.3844;VDB=0.231502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G17S|150|LOC_Os06g15600|protein_coding|CODING|LOC_Os06g15600.1|1|1) FN2302.SNP.6:8837860 chr06:008837860 0 W/8837860-8837860 FN2302 SNP G -> T AC=1;AN=192;BQB=0.173243;DP=4730;DP4=2107,2197,13,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.52043e-19;MQSB=0.922695;RPB=0.988196;SGB=72.5078;VDB=0.0855547;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G16|150|LOC_Os06g15600|protein_coding|CODING|LOC_Os06g15600.1|1|1) FN2302.SNP.6:8837861 chr06:008837861 0 W/8837861-8837861 FN2302 SNP C -> T AC=1;AN=192;BQB=0.10724;DP=4704;DP4=2124,2235,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.51917e-17;MQSB=0.952379;RPB=0.69723;SGB=69.9435;VDB=0.0417896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G16D|150|LOC_Os06g15600|protein_coding|CODING|LOC_Os06g15600.1|1|1) FN1368-S.SNP.6:8846320 chr06:008846320 0 W/8846320-8846320 FN1368-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4202-S.SNP.6:8848204 chr06:008848204 0 W/8848204-8848204 FN4202-S SNP G -> T AC=1;AN=170;BQB=0.944868;DP=2727;DP4=1260,1321,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000366703;MQB=4.39494e-09;MQSB=0.873895;RPB=0.49274;SGB=24.7692;VDB=0.971303;EFF=UTR_3_PRIME(MODIFIER||169||110|LOC_Os06g15620|protein_coding|CODING|LOC_Os06g15620.1|2|1) FN3455-S.SNP.6:8854211 chr06:008854211 0 W/8854211-8854211 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.999811;DP=4071;DP4=1982,2009,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00073692;MQB=5.32543e-08;MQSB=0.136846;RPB=0.260721;SGB=80.3949;VDB=0.0552745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E67K|519|LOC_Os06g15630|protein_coding|CODING|LOC_Os06g15630.1|1|1) FN2537-S.SNP.6:8857031 chr06:008857031 0 W/8857031-8857031 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.367656;DP=5363;DP4=2640,2242,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0518367;MQB=0.144957;MQSB=0.000814086;RPB=0.975343;SGB=34.5346;VDB=0.806018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1547-S.SNP.6:8858858 chr06:008858858 0 W/8858858-8858858 FN1547-S Single Base Substitution A-C INTRON HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2587-S.SNP.6:8862238 chr06:008862238 0 W/8862238-8862238 FN2587-S SNP C -> A AC=1;AN=198;BQB=0.808387;DP=4134;DP4=1966,1963,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0774069;MQB=0.968091;MQSB=4.74642e-33;RPB=0.615788;SGB=4.56404;VDB=0.04846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D1008E|1368|LOC_Os06g15640|protein_coding|CODING|LOC_Os06g15640.1|4|1) FN2551-S.SNP.6:8864767 chr06:008864767 0 W/8864767-8864767 FN2551-S SNP C -> A AC=1;AN=198;BQB=0.966349;DP=4531;DP4=2516,1743,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0450232;MQB=0.212087;MQSB=2.21033e-08;RPB=0.585073;SGB=-8.4797;VDB=0.281022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.6:8864791 chr06:008864791 0 W/8864791-8864791 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.895769;DP=5157;DP4=2551,2206,14,19;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0228815;MQB=0.191146;MQSB=1.46333e-05;RPB=0.835146;SGB=-43.0163;VDB=0.276285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.6:8865776 chr06:008865776 0 W/8865776-8865776 FN2480 SNP G -> A AC=1;AN=200;BQB=0.765975;DP=4998;DP4=2617,2031,13,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00840336;MQB=0.0983275;MQSB=0.000841113;RPB=0.986975;SGB=65.5058;VDB=0.660221;EFF=INTRON(MODIFIER||||146|LOC_Os06g15650|protein_coding|CODING|LOC_Os06g15650.1|1|1) FN3435-S.SNP.6:8871815 chr06:008871815 0 W/8871815-8871815 FN3435-S SNP T -> A AC=1;AN=184;BQB=0.984792;DP=2961;DP4=1445,1359,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000337724;MQB=6.11673e-06;MQSB=0.999051;RPB=0.201316;SGB=13.188;VDB=0.00745626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.6:8875050 chr06:008875050 0 W/8875050-8875050 FN1262-S Single Base Substitution C-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3446-S.SNP.6:8877947 chr06:008877947 0 W/8877947-8877947 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.923163;DP=3584;DP4=1573,1904,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.18533e-09;MQSB=0.151407;RPB=0.825071;SGB=57.786;VDB=0.114099;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.6:8890965 chr06:008890965 0 W/8890965-8890965 FN-316 Single Base Substitution C-A UTR_5_PRIME HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN4181-S.SNP.6:8892840 chr06:008892840 0 W/8892840-8892840 FN4181-S SNP C -> T AC=1;AN=170;BQB=0.780815;DP=2430;DP4=1128,1234,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.6036e-07;MQSB=0.99985;RPB=0.998865;SGB=34.878;VDB=0.361517;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S295F|1919|LOC_Os06g15700|protein_coding|CODING|LOC_Os06g15700.1|2|1) FN1689-S.SNP.6:8901917 chr06:008901917 0 W/8901917-8901917 FN1689-S SNP A -> T AC=2;AN=188;BQB=0.28715;DP=4116;DP4=1652,2410,11,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.79802e-13;MQSB=0.983003;RPB=0.498523;SGB=27.1443;VDB=0.833544;EFF=INTRON(MODIFIER||||1919|LOC_Os06g15700|protein_coding|CODING|LOC_Os06g15700.1|12|1) FN1732-S.SNP.6:8902810 chr06:008902810 0 W/8902810-8902810 FN1732-S SNP A -> G AC=1;AN=188;BQB=0.222243;DP=3693;DP4=1837,1812,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.00675e-12;MQSB=0.96522;RPB=0.295337;SGB=-41.0182;VDB=0.351741;EFF=UTR_3_PRIME(MODIFIER||140||1919|LOC_Os06g15700|protein_coding|CODING|LOC_Os06g15700.1|13|1) FN1045-S.SNP.6:8906378 chr06:008906378 0 W/8906378-8906378 FN1045-S Single Base Substitution C-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN571-S.SNP.6:8907911 chr06:008907911 0 W/8907911-8907911 FN571-S Single Base Substitution T-C INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN451-S.SNP.6:8920554 chr06:008920554 0 W/8920554-8920554 FN451-S Single Base Substitution A-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1722-S.SNP.6:8923229 chr06:008923229 0 W/8923229-8923229 FN1722-S SNP T -> A AC=2;AN=188;BQB=0.931863;DP=3827;DP4=1568,2196,24,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.1326e-25;MQSB=0.791664;RPB=0.946131;SGB=107.462;VDB=0.18142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.6:8937053 chr06:008937053 0 W/8937053-8937053 FN1484-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g15750 NB-ARC domain containing protein, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN3418-S.SNP.6:8945965 chr06:008945965 0 W/8945965-8945965 FN3418-S SNP C -> A AC=1;AN=184;BQB=0.974359;DP=2858;DP4=1542,1246,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02003e-10;MQSB=0.998485;RPB=0.548124;SGB=46.3132;VDB=0.712842;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.6:8949199 chr06:008949199 0 W/8949199-8949199 FN1373-S Single Base Substitution C-T INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3446-S.SNP.6:8955786 chr06:008955786 0 W/8955786-8955786 FN3446-S SNP C -> G AC=1;AN=184;BQB=0.948501;DP=3853;DP4=2063,1693,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16989e-06;MQSB=0.608125;RPB=0.67681;SGB=48.7425;VDB=0.868582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P7R|538|LOC_Os06g15760|protein_coding|CODING|LOC_Os06g15760.1|1|1) FN3856-S.SNP.6:8962767 chr06:008962767 0 W/8962767-8962767 FN3856-S SNP G -> A AC=1;AN=158;BQB=0.989816;DP=2385;DP4=1020,1299,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.44101e-06;MQSB=0.972133;RPB=0.99155;SGB=42.6978;VDB=0.974004;EFF=INTRON(MODIFIER||||388|LOC_Os06g15779|protein_coding|CODING|LOC_Os06g15779.1|1|1) FN1337-S.SNP.6:8963493 chr06:008963493 0 W/8963493-8963493 FN1337-S Single Base Substitution C-T INTRON HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1337-S.SNP.6:8963494 chr06:008963494 0 W/8963494-8963494 FN1337-S Single Base Substitution C-T INTRON HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1536-S.SNP.6:8973000 chr06:008973000 0 W/8973000-8973000 FN1536-S Single Base Substitution T-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3443-S.SNP.6:8975041 chr06:008975041 0 W/8975041-8975041 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.437925;DP=2545;DP4=1128,1275,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93187e-06;MQSB=0.934313;RPB=0.663636;SGB=3.75875;VDB=0.929715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N10D|151|LOC_Os06g15810|protein_coding|CODING|LOC_Os06g15810.1|3|1) FN1002-S.SNP.6:8984675 chr06:008984675 0 W/8984675-8984675 FN1002-S Single Base Substitution G-C INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2200-S.SNP.6:8985542 chr06:008985542 0 W/8985542-8985542 FN2200-S SNP G -> T AC=1;AN=190;BQB=0.646158;DP=5374;DP4=2345,2585,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52955e-12;MQSB=0.552492;RPB=0.4231;SGB=21.2038;VDB=0.790443;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.6:8986507 chr06:008986507 0 W/8986507-8986507 FN446-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g15830 expressed protein SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2095-S.SNP.6:9009791 chr06:009009791 0 W/9009791-9009791 FN2095-S SNP T -> C AC=2;AN=168;BQB=0.386685;DP=3761;DP4=1579,2123,12,26;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0146238;MQB=3.27499e-14;MQSB=0.954817;RPB=0.384394;SGB=-6.75618;VDB=0.624091;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y1255C|1357|LOC_Os06g15870|protein_coding|CODING|LOC_Os06g15870.1|7|1) FN819-S.SNP.6:9012188 chr06:009012188 0 W/9012188-9012188 FN819-S Single Base Substitution A-C INTRON HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2403.SNP.6:9013326 chr06:009013326 0 W/9013326-9013326 FN2403 SNP C -> A AC=1;AN=200;BQB=0.94929;DP=4173;DP4=1943,1981,9,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00814762;MQB=0.0491658;MQSB=0.283908;RPB=0.972492;SGB=21.6694;VDB=0.419688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E395D|1357|LOC_Os06g15870|protein_coding|CODING|LOC_Os06g15870.1|2|1) FN_N1-213-1.SNP.6:9022299 chr06:009022299 0 W/9022299-9022299 FN_N1-213-1 Single Base Substitution G-A HET LOC_Os06g15900 conserved hypothetical protein SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1585-S.SNP.6:9026096 chr06:009026096 0 W/9026096-9026096 FN1585-S Single Base Substitution T-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-171.SNP.6:9026370 chr06:009026370 0 W/9026370-9026370 FN-171 Single Base Substitution T-C INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2754-S.SNP.6:9031784 chr06:009031784 0 W/9031784-9031784 FN2754-S SNP A -> T AC=1;AN=200;BQB=0.206636;DP=4495;DP4=2328,1741,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96024e-09;MQSB=0.817976;RPB=0.998218;SGB=-63.8899;VDB=0.0959142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.6:9038607 chr06:009038607 0 W/9038607-9038607 FN1452-S Single Base Substitution C-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3463-S.SNP.6:9040098 chr06:009040098 0 W/9040098-9040098 FN3463-S SNP T -> A AC=2;AN=184;BQB=0.571115;DP=2955;DP4=1401,1462,3,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000338409;MQB=2.87285e-06;MQSB=0.920402;RPB=0.687442;SGB=42.7914;VDB=0.0826159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.6:9043929 chr06:009043929 0 W/9043929-9043929 FN1038-S Single Base Substitution C-T INTERGENIC HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1038-S.SNP.6:9043930 chr06:009043930 0 W/9043930-9043930 FN1038-S Single Base Substitution C-T INTERGENIC HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1192-S.SNP.6:9044018 chr06:009044018 0 W/9044018-9044018 FN1192-S Single Base Substitution A-G INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1325-S.SNP.6:9045894 chr06:009045894 0 W/9045894-9045894 FN1325-S Single Base Substitution C-T INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1453-S.SNP.6:9047360 chr06:009047360 0 W/9047360-9047360 FN1453-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1280-S.SNP.6:9047596 chr06:009047596 0 W/9047596-9047596 FN1280-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1256-S.SNP.6:9047740 chr06:009047740 0 W/9047740-9047740 FN1256-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN_815-4-1.SNP.6:9051670 chr06:009051670 0 W/9051670-9051670 FN_815-4-1 Single Base Substitution C-G Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN2470.SNP.6:9078607 chr06:009078607 0 W/9078607-9078607 FN2470 SNP C -> T AC=1;AN=200;BQB=0.996368;DP=4131;DP4=2083,1807,6,7;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.0384895;MQB=0.999979;MQSB=0;RPB=0.853388;SGB=54.2646;VDB=0.769225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C489Y|1388|LOC_Os06g15970|protein_coding|CODING|LOC_Os06g15970.1|1|1) FN666-S.SNP.6:9081923 chr06:009081923 0 W/9081923-9081923 FN666-S Single Base Substitution C-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2293.SNP.6:9097354 chr06:009097354 0 W/9097354-9097354 FN2293 SNP G -> A AC=1;AN=192;BQB=0.919606;DP=5525;DP4=2839,2194,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39284e-07;MQSB=0.998706;RPB=0.814656;SGB=58.3392;VDB=0.37956;EFF=UTR_3_PRIME(MODIFIER||614||111|LOC_Os06g15995|protein_coding|CODING|LOC_Os06g15995.1|1|1) FN-342.SNP.6:9103552 chr06:009103552 0 W/9103552-9103552 FN-342 Single Base Substitution T-C INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3360-S.SNP.6:9104547 chr06:009104547 0 W/9104547-9104547 FN3360-S SNP A -> G AC=2;AN=184;BQB=0.982327;DP=3399;DP4=1820,1417,27,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08687e-18;MQSB=0.000439653;RPB=0.984681;SGB=141.402;VDB=0.953182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.6:9106689 chr06:009106689 0 W/9106689-9106689 FN1176-S Single Base Substitution T-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3357-S.SNP.6:9115203 chr06:009115203 0 W/9115203-9115203 FN3357-S SNP T -> G AC=2;AN=184;BQB=0.995362;DP=3598;DP4=1400,1935,15,31;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.24146e-24;MQSB=0.992;RPB=0.850757;SGB=202.483;VDB=0.696221;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggC|G75|197|LOC_Os06g16020|protein_coding|CODING|LOC_Os06g16020.1|1|1) FN2480.SNP.6:9119692 chr06:009119692 0 W/9119692-9119692 FN2480 SNP A -> G AC=1;AN=200;BQB=0.595026;DP=4970;DP4=2348,2301,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.03651e-06;MQSB=0.98568;RPB=0.989321;SGB=40.2696;VDB=0.132759;EFF=INTRON(MODIFIER||||480|LOC_Os06g16030|protein_coding|CODING|LOC_Os06g16030.1|3|1) FN2177-S.SNP.6:9122107 chr06:009122107 0 W/9122107-9122107 FN2177-S SNP C -> T AC=1;AN=168;BQB=0.0278366;DP=3363;DP4=1338,1937,5,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46047e-07;MQSB=0.767344;RPB=0.932752;SGB=-95.493;VDB=0.181514;EFF=INTRON(MODIFIER||||480|LOC_Os06g16030|protein_coding|CODING|LOC_Os06g16030.1|4|1) FN3564-S.SNP.6:9126228 chr06:009126228 0 W/9126228-9126228 FN3564-S SNP A -> T AC=1;AN=188;BQB=0.859146;DP=2790;DP4=1160,1497,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65166e-08;MQSB=0.966961;RPB=0.873905;SGB=28.6195;VDB=0.613292;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.6:9138526 chr06:009138526 0 W/9138526-9138526 FN_N1-150-1 Single Base Substitution G-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3958-S.SNP.6:9141568 chr06:009141568 0 W/9141568-9141568 FN3958-S SNP G -> T AC=1;AN=168;BQB=0.998544;DP=2414;DP4=1168,1144,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.37682e-08;MQSB=0.989205;RPB=0.996882;SGB=41.6096;VDB=0.515242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.6:9145582 chr06:009145582 0 W/9145582-9145582 FN1302-S Single Base Substitution T-C INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3935-S.SNP.6:9149757 chr06:009149757 0 W/9149757-9149757 FN3935-S SNP G -> T AC=1;AN=158;BQB=0.886678;DP=2711;DP4=1288,1295,14,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.29829e-14;MQSB=0.75186;RPB=0.12369;SGB=67.7679;VDB=0.179827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F195L|1094|LOC_Os06g16070|protein_coding|CODING|LOC_Os06g16070.1|1|1) FN3935-S.SNP.6:9149758 chr06:009149758 0 W/9149758-9149758 FN3935-S SNP A -> T AC=1;AN=158;BQB=0.903872;DP=2702;DP4=1279,1286,15,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.28434e-14;MQSB=0.714791;RPB=0.332759;SGB=67.7679;VDB=0.344988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F195Y|1094|LOC_Os06g16070|protein_coding|CODING|LOC_Os06g16070.1|1|1) FN1422-S.SNP.6:9151103 chr06:009151103 0 W/9151103-9151103 FN1422-S Single Base Substitution G-C INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1585-S.SNP.6:9153884 chr06:009153884 0 W/9153884-9153884 FN1585-S Single Base Substitution T-G INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3728-S.SNP.6:9159305 chr06:009159305 0 W/9159305-9159305 FN3728-S SNP C -> G AC=2;AN=190;BQB=0.999284;DP=2868;DP4=1104,1603,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.71487e-13;MQSB=0.674542;RPB=0.276597;SGB=44.0907;VDB=0.256062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.6:9161513 chr06:009161513 0 W/9161513-9161513 FN2351 SNP G -> A AC=1;AN=192;BQB=0.952192;DP=4727;DP4=2112,2363,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13467e-07;MQSB=0.999961;RPB=0.996652;SGB=-14.7687;VDB=0.324463;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L570|812|LOC_Os06g16090|protein_coding|CODING|LOC_Os06g16090.1|3|1) FN3545-S.SNP.6:9165556 chr06:009165556 0 W/9165556-9165556 FN3545-S SNP A -> T AC=1;AN=188;BQB=0.97968;DP=2665;DP4=1323,1259,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.5372e-08;MQSB=0.0330464;RPB=0.517987;SGB=48.979;VDB=0.0587867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.6:9165557 chr06:009165557 0 W/9165557-9165557 FN3545-S SNP C -> T AC=1;AN=188;BQB=0.995843;DP=2662;DP4=1320,1148,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.72625e-09;MQSB=0.11168;RPB=0.162976;SGB=-14.9998;VDB=0.0264012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.6:9165732 chr06:009165732 0 W/9165732-9165732 FN2165-S SNP G -> T AC=1;AN=168;BQB=0.843439;DP=4130;DP4=1924,2158,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.03605e-11;MQSB=0.999972;RPB=0.901981;SGB=14.2064;VDB=0.335582;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.6:9171772 chr06:009171772 0 W/9171772-9171772 FN-399 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g16100 retrotransposon, putative, centromere-specific, expressed SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.6:9171772 chr06:009171772 0 W/9171772-9171772 FN399-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g16100 retrotransposon, putative, centromere-specific, expressed SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1730-S.SNP.6:9172724 chr06:009172724 0 W/9172724-9172724 FN1730-S SNP T -> C AC=2;AN=188;BQB=0.752205;DP=2009;DP4=1210,756,12,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.37066e-11;MQSB=0.79064;RPB=0.576182;SGB=43.8792;VDB=0.936007;EFF=INTRON(MODIFIER||||910|LOC_Os06g16100|protein_coding|CODING|LOC_Os06g16100.1|1|1) FN3542-S.SNP.6:9172724 chr06:009172724 0 W/9172724-9172724 FN3542-S SNP T -> C AC=2;AN=188;BQB=0.999839;DP=3701;DP4=1892,1663,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.10804e-21;MQSB=0.694381;RPB=0.966693;SGB=171.648;VDB=0.458106;EFF=INTRON(MODIFIER||||910|LOC_Os06g16100|protein_coding|CODING|LOC_Os06g16100.1|1|1) FN3811-S.SNP.6:9172724 chr06:009172724 0 W/9172724-9172724 FN3811-S SNP T -> C AC=2;AN=190;BQB=0.964022;DP=3446;DP4=1815,1489,27,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.57128e-28;MQSB=0.919519;RPB=0.751392;SGB=164.04;VDB=0.848749;EFF=INTRON(MODIFIER||||910|LOC_Os06g16100|protein_coding|CODING|LOC_Os06g16100.1|1|1) FN539-S.SNP.6:9172724 chr06:009172724 0 W/9172724-9172724 FN539-S Single Base Substitution T-C INTRON HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2553-S.SNP.6:9174497 chr06:009174497 0 W/9174497-9174497 FN2553-S SNP A -> G AC=2;AN=198;BQB=0.366395;DP=4370;DP4=1962,2091,22,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.55273e-26;MQSB=0.925934;RPB=0.954899;SGB=109.793;VDB=0.0536987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.6:9177924 chr06:009177924 0 W/9177924-9177924 FN2246-S SNP C -> G AC=2;AN=190;BQB=0.0140633;DP=3593;DP4=1720,1541,17,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.07685e-12;MQSB=0.00387452;RPB=0.93434;SGB=121.957;VDB=0.142736;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G67|303|LOC_Os06g16120|protein_coding|CODING|LOC_Os06g16120.1|1|1) FN2146-S.SNP.6:9180037 chr06:009180037 0 W/9180037-9180037 FN2146-S SNP C -> T AC=1;AN=168;BQB=0.581954;DP=3581;DP4=1819,1727,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.64578e-06;MQSB=0.993517;RPB=0.695982;SGB=-17.5266;VDB=0.195012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.6:9185774 chr06:009185774 0 W/9185774-9185774 FN1349-S Single Base Substitution A-G INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN700-S.SNP.6:9190386 chr06:009190386 0 W/9190386-9190386 FN700-S Single Base Substitution C-T INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1344-S.SNP.6:9190776 chr06:009190776 0 W/9190776-9190776 FN1344-S Single Base Substitution C-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2318.SNP.6:9192320 chr06:009192320 0 W/9192320-9192320 FN2318 SNP C -> T AC=1;AN=192;BQB=0.630346;DP=4567;DP4=1985,2199,5,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.24421e-11;MQSB=0.161897;RPB=0.999992;SGB=57.6018;VDB=0.78366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.6:9199565 chr06:009199565 0 W/9199565-9199565 FN2209-S SNP A -> G AC=1;AN=190;BQB=0.998924;DP=3906;DP4=2139,1367,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31267e-06;MQSB=0.0380141;RPB=0.0515419;SGB=32.5467;VDB=0.00535479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.6:9199740 chr06:009199740 0 W/9199740-9199740 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.751359;DP=4009;DP4=2021,1642,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22895e-08;MQSB=0.272784;RPB=0.480717;SGB=-13.2407;VDB=0.634427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.6:9206062 chr06:009206062 0 W/9206062-9206062 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.845054;DP=2507;DP4=1218,1133,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000108944;MQSB=0.914592;RPB=0.567401;SGB=30.8803;VDB=0.316575;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W116R|822|LOC_Os06g16160|protein_coding|CODING|LOC_Os06g16160.1|1|1) FN3562-S.SNP.6:9214333 chr06:009214333 0 W/9214333-9214333 FN3562-S SNP T -> C AC=1;AN=188;BQB=0.952156;DP=2552;DP4=1365,1101,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63251e-08;MQSB=0.698045;RPB=0.998735;SGB=35.9843;VDB=0.704797;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.6:9215675 chr06:009215675 0 W/9215675-9215675 FN533-S Single Base Substitution T-G INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN3795-S.SNP.6:9218962 chr06:009218962 0 W/9218962-9218962 FN3795-S SNP T -> C AC=2;AN=190;BQB=0.985426;DP=2724;DP4=1263,1309,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.98626e-14;MQSB=0.790687;RPB=0.949879;SGB=56.8601;VDB=0.0266662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.6:9220330 chr06:009220330 0 W/9220330-9220330 FN1740-S SNP G -> T AC=1;AN=188;BQB=0.0104625;DP=3836;DP4=2096,1692,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26742e-05;MQSB=0.799201;RPB=0.522564;SGB=-128.262;VDB=0.222167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.6:9221431 chr06:009221431 0 W/9221431-9221431 FN2485 SNP A -> G AC=1;AN=200;BQB=0.751276;DP=4520;DP4=1640,2498,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53802e-13;MQSB=0.230814;RPB=0.893674;SGB=-8.26887;VDB=0.0744537;EFF=UTR_5_PRIME(MODIFIER||85||438|LOC_Os06g16200|protein_coding|CODING|LOC_Os06g16200.1|1|1) FN861-S.SNP.6:9221615 chr06:009221615 0 W/9221615-9221615 FN861-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g16200 proteins of unknown function domain containing protein, expressed SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN4112-S.SNP.6:9228324 chr06:009228324 0 W/9228324-9228324 FN4112-S SNP G -> A AC=1;AN=182;BQB=0.996878;DP=2448;DP4=1144,1218,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.16191e-07;MQSB=0.814218;RPB=0.779812;SGB=53.1331;VDB=0.486863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.6:9229417 chr06:009229417 0 W/9229417-9229417 FN1241-S Single Base Substitution T-C INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3964-S.SNP.6:9246517 chr06:009246517 0 W/9246517-9246517 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.98225;DP=2617;DP4=1040,1443,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.892e-07;MQSB=0.617414;RPB=0.820946;SGB=17.3231;VDB=0.657708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.6:9250614 chr06:009250614 0 W/9250614-9250614 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.98048;DP=4159;DP4=1732,2206,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000240442;MQB=2.08375e-08;MQSB=0.988428;RPB=0.911922;SGB=63.3342;VDB=0.542796;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.6:9253267 chr06:009253267 0 W/9253267-9253267 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.98853;DP=3051;DP4=1159,1829,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.14518e-10;MQSB=0.950362;RPB=0.901276;SGB=-13.3699;VDB=0.78834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.6:9264118 chr06:009264118 0 W/9264118-9264118 FN2668-S SNP T -> G AC=1;AN=200;BQB=0.988107;DP=4582;DP4=2272,2006,30,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.70885e-25;MQSB=0.999115;RPB=0.876387;SGB=-104.34;VDB=0.560002;EFF=INTRON(MODIFIER||||71|LOC_Os06g16270|protein_coding|CODING|LOC_Os06g16270.1|1|1) FN3596-S.SNP.6:9264319 chr06:009264319 0 W/9264319-9264319 FN3596-S SNP G -> A AC=1;AN=188;BQB=0.989778;DP=2869;DP4=1417,1405,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0369e-06;MQSB=0.920899;RPB=0.999743;SGB=39.8925;VDB=0.607432;EFF=INTRON(MODIFIER||||71|LOC_Os06g16270|protein_coding|CODING|LOC_Os06g16270.1|2|1) FN_772-3-1.SNP.6:9266423 chr06:009266423 0 W/9266423-9266423 FN_772-3-1 Single Base Substitution C-G HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN788-S.SNP.6:9266511 chr06:009266511 0 W/9266511-9266511 FN788-S Single Base Substitution A-G INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN876-S.SNP.6:9270494 chr06:009270494 0 W/9270494-9270494 FN876-S Single Base Substitution T-C INTRON HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3528-S.SNP.6:9271842 chr06:009271842 0 W/9271842-9271842 FN3528-S SNP C -> G AC=2;AN=188;BQB=0.573862;DP=3026;DP4=1508,1420,19,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.63998e-15;MQSB=0.980875;RPB=0.988588;SGB=103.307;VDB=0.269591;EFF=SPLICE_SITE_REGION(LOW||||1072|LOC_Os06g16280|protein_coding|CODING|LOC_Os06g16280.1|18|1),INTRON(MODIFIER||||1072|LOC_Os06g16280|protein_coding|CODING|LOC_Os06g16280.1|18|1) FN1492-S.SNP.6:9272466 chr06:009272466 0 W/9272466-9272466 FN1492-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2244-S.SNP.6:9273761 chr06:009273761 0 W/9273761-9273761 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.400718;DP=5045;DP4=2523,2206,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.92286e-07;MQSB=0.18649;RPB=0.977392;SGB=28.9929;VDB=0.427987;EFF=INTRON(MODIFIER||||1072|LOC_Os06g16280|protein_coding|CODING|LOC_Os06g16280.1|11|1) FN2424.SNP.6:9283275 chr06:009283275 0 W/9283275-9283275 FN2424 SNP C -> T AC=2;AN=200;BQB=0.978943;DP=4109;DP4=2010,1816,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.02228e-19;MQSB=0.0174081;RPB=0.934378;SGB=187.814;VDB=0.981634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T5M|150|LOC_Os06g16290|protein_coding|CODING|LOC_Os06g16290.1|1|1) FN3674-S.SNP.6:9284137 chr06:009284137 0 W/9284137-9284137 FN3674-S SNP C -> G AC=1;AN=190;BQB=0.833195;DP=3143;DP4=1405,1595,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18567e-08;MQSB=0.997683;RPB=0.301912;SGB=39.6545;VDB=0.888366;EFF=INTRON(MODIFIER||||150|LOC_Os06g16290|protein_coding|CODING|LOC_Os06g16290.1|3|1) FN3823-S.SNP.6:9297069 chr06:009297069 0 W/9297069-9297069 FN3823-S SNP C -> T AC=1;AN=190;BQB=0.878999;DP=3431;DP4=1678,1647,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.03993;MQB=0.182226;MQSB=0.0147778;RPB=0.960486;SGB=49.0954;VDB=0.295418;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A867|1028|LOC_Os06g16310|protein_coding|CODING|LOC_Os06g16310.1|2|1) FN2419.SNP.6:9297445 chr06:009297445 0 W/9297445-9297445 FN2419 SNP G -> A AC=1;AN=200;BQB=0.726388;DP=3770;DP4=1797,1708,9,6;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0755968;MQB=0.925085;MQSB=0.000406548;RPB=0.962461;SGB=24.2746;VDB=0.0111346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E993K|1028|LOC_Os06g16310|protein_coding|CODING|LOC_Os06g16310.1|2|1) FN1577-S.SNP.6:9308339 chr06:009308339 0 W/9308339-9308339 FN1577-S Single Base Substitution C-T INTERGENIC Homo SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4300-S.SNP.6:9312033 chr06:009312033 0 W/9312033-9312033 FN4300-S SNP G -> A AC=2;AN=170;BQB=0.877656;DP=2411;DP4=1078,1253,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.34733e-15;MQSB=0.999834;RPB=0.858231;SGB=114.512;VDB=0.918637;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.6:9314987 chr06:009314987 0 W/9314987-9314987 W247-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3677-S.SNP.6:9343246 chr06:009343246 0 W/9343246-9343246 FN3677-S SNP G -> T AC=1;AN=190;BQB=0.779826;DP=2816;DP4=1416,1271,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.66467e-06;MQSB=0.807074;RPB=0.326477;SGB=36.1006;VDB=0.913403;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.6:9352081 chr06:009352081 0 W/9352081-9352081 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2434.SNP.6:9353168 chr06:009353168 0 W/9353168-9353168 FN2434 SNP C -> T AC=1;AN=200;BQB=0.0882053;DP=3857;DP4=1578,1845,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000376007;MQSB=0.267147;RPB=0.622665;SGB=11.2488;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.6:9356898 chr06:009356898 0 W/9356898-9356898 FN4221-S SNP A -> T AC=1;AN=170;BQB=0.974155;DP=2796;DP4=1388,1335,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.84221e-07;MQSB=0.979402;RPB=0.348404;SGB=38.987;VDB=0.108725;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q301L|896|LOC_Os06g16390|protein_coding|CODING|LOC_Os06g16390.1|8|1) FN4183-S.SNP.6:9359916 chr06:009359916 0 W/9359916-9359916 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.999537;DP=2573;DP4=1119,1395,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.71276e-07;MQSB=0.924359;RPB=0.824804;SGB=38.987;VDB=0.693683;EFF=INTRON(MODIFIER||||896|LOC_Os06g16390|protein_coding|CODING|LOC_Os06g16390.1|12|1) FN448-S.SNP.6:9363287 chr06:009363287 0 W/9363287-9363287 FN448-S Single Base Substitution A-G INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2661-S.SNP.6:9365551 chr06:009365551 0 W/9365551-9365551 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.96346;DP=4825;DP4=2293,2306,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62341e-06;MQSB=0.973823;RPB=0.999139;SGB=29.4541;VDB=0.797506;EFF=INTRON(MODIFIER||||437|LOC_Os06g16400|protein_coding|CODING|LOC_Os06g16400.1|2|1),INTRON(MODIFIER||||437|LOC_Os06g16400|protein_coding|CODING|LOC_Os06g16400.2|2|1) FN1443-S.SNP.6:9367033 chr06:009367033 0 W/9367033-9367033 FN1443-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2162-S.SNP.6:9383863 chr06:009383863 0 W/9383863-9383863 FN2162-S SNP G -> C AC=2;AN=168;BQB=0.502;DP=3699;DP4=1996,1634,35,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.79589e-22;MQSB=0.996641;RPB=0.999652;SGB=52.8385;VDB=0.716739;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.6:9384702 chr06:009384702 0 W/9384702-9384702 FN989-S Single Base Substitution T-C INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN4271-S.SNP.6:9387965 chr06:009387965 0 W/9387965-9387965 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.51164;DP=1641;DP4=379,997,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0780012;MQB=0.962432;MQSB=0.109772;RPB=0.609715;SGB=10.1134;VDB=0.108725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.6:9394422 chr06:009394422 0 W/9394422-9394422 FN3859-S SNP A -> G AC=2;AN=158;BQB=0.949539;DP=2563;DP4=1318,1166,14,12;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=1.04708e-09;MQSB=0.678381;RPB=0.754936;SGB=108.239;VDB=0.0686956;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.6:9394529 chr06:009394529 0 W/9394529-9394529 FN1268-S Single Base Substitution C-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1151-S.SNP.6:9396251 chr06:009396251 0 W/9396251-9396251 FN1151-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2267-S.SNP.6:9397178 chr06:009397178 0 W/9397178-9397178 FN2267-S SNP T -> G AC=1;AN=190;BQB=0.999999;DP=4805;DP4=2398,2060,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.68113e-08;MQSB=0.653379;RPB=0.99104;SGB=49.0954;VDB=0.526052;EFF=INTRON(MODIFIER||||448|LOC_Os06g16420|protein_coding|CODING|LOC_Os06g16420.1|1|1),INTRON(MODIFIER||||402|LOC_Os06g16420|protein_coding|CODING|LOC_Os06g16420.2|1|1),INTRON(MODIFIER||||274|LOC_Os06g16420|protein_coding|CODING|LOC_Os06g16420.3|1|1) FN671-S.SNP.6:9401471 chr06:009401471 0 W/9401471-9401471 FN671-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g16430 FHA domain containing protein, putative, expressed SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1045-S.SNP.6:9406954 chr06:009406954 0 W/9406954-9406954 FN1045-S Single Base Substitution A-C INTRON HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2697-S.SNP.6:9407962 chr06:009407962 0 W/9407962-9407962 FN2697-S SNP G -> A AC=1;AN=200;BQB=0.386478;DP=4906;DP4=2320,2313,20,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.27565e-25;MQSB=0.990867;RPB=0.951181;SGB=94.6142;VDB=0.992067;EFF=INTRON(MODIFIER||||764|LOC_Os06g16430|protein_coding|CODING|LOC_Os06g16430.1|11|1) FN3484-S.SNP.6:9413580 chr06:009413580 0 W/9413580-9413580 FN3484-S SNP G -> T AC=1;AN=184;BQB=0.786252;DP=2088;DP4=1100,911,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.19778e-09;MQSB=0.796938;RPB=0.558561;SGB=57.786;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.6:9413862 chr06:009413862 0 W/9413862-9413862 FN1675-S SNP G -> A AC=1;AN=188;BQB=0.292823;DP=2904;DP4=1911,967,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.16773e-06;MQSB=0.90883;RPB=0.759138;SGB=-14.4565;VDB=0.171568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.6:9413863 chr06:009413863 0 W/9413863-9413863 FN1675-S SNP C -> T AC=1;AN=188;BQB=0.701202;DP=2898;DP4=1910,962,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30306e-07;MQSB=0.896534;RPB=0.717904;SGB=23.5329;VDB=0.110236;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.6:9414310 chr06:009414310 0 W/9414310-9414310 FN3864-S SNP T -> A AC=1;AN=158;BQB=0.749839;DP=2169;DP4=1009,1073,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.2689e-06;MQSB=0.957098;RPB=0.753604;SGB=68.9144;VDB=0.0432272;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.6:9414937 chr06:009414937 0 W/9414937-9414937 FN1405-S Single Base Substitution G-C INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN463-S.SNP.6:9417074 chr06:009417074 0 W/9417074-9417074 FN463-S Single Base Substitution C-T INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1339-S.SNP.6:9431991 chr06:009431991 0 W/9431991-9431991 FN1339-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN846-S.SNP.6:9438393 chr06:009438393 0 W/9438393-9438393 FN846-S Single Base Substitution T-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2734-S.SNP.6:9441417 chr06:009441417 0 W/9441417-9441417 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.798936;DP=5160;DP4=2393,2401,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.38871e-15;MQSB=0.98755;RPB=0.163536;SGB=-9.47921;VDB=0.183833;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.6:9444349 chr06:009444349 0 W/9444349-9444349 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.920103;DP=2697;DP4=1297,1302,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.17126e-05;MQSB=0.957028;RPB=0.22157;SGB=17.5943;VDB=0.923913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.6:9445914 chr06:009445914 0 W/9445914-9445914 FN1443-S Single Base Substitution C-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1443-S.SNP.6:9445915 chr06:009445915 0 W/9445915-9445915 FN1443-S Single Base Substitution C-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1435-S.SNP.6:9448335 chr06:009448335 0 W/9448335-9448335 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN3693-S.SNP.6:9448445 chr06:009448445 0 W/9448445-9448445 FN3693-S SNP G -> C AC=1;AN=190;BQB=0.789778;DP=2647;DP4=1072,1492,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000377786;MQB=1.13616e-05;MQSB=0.860158;RPB=0.981371;SGB=15.9981;VDB=0.14083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.6:9448738 chr06:009448738 0 W/9448738-9448738 FN2424 SNP T -> A AC=2;AN=200;BQB=0.968712;DP=4327;DP4=2040,1945,19,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.5839e-23;MQSB=0.797069;RPB=0.396551;SGB=177.266;VDB=0.712217;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.6:9451021 chr06:009451021 0 W/9451021-9451021 FN950-S Single Base Substitution G-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN4179-S.SNP.6:9451517 chr06:009451517 0 W/9451517-9451517 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.95003;DP=2637;DP4=1251,1198,18,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.07248e-17;MQSB=0.988969;RPB=0.915304;SGB=110.616;VDB=0.949696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.6:9462629 chr06:009462629 0 W/9462629-9462629 FN1470-S Single Base Substitution G-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN761-S.SNP.6:9493123 chr06:009493123 0 W/9493123-9493123 FN761-S Single Base Substitution T-A INTRON HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1527-S.SNP.6:9502462 chr06:009502462 0 W/9502462-9502462 FN1527-S Single Base Substitution G-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3711-S.SNP.6:9502797 chr06:009502797 0 W/9502797-9502797 FN3711-S SNP C -> T AC=2;AN=190;BQB=0.925421;DP=2114;DP4=759,1255,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.79762e-08;MQSB=0.100204;RPB=0.839867;SGB=71.8647;VDB=0.744433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.6:9506227 chr06:009506227 0 W/9506227-9506227 FN3508-S SNP T -> C AC=1;AN=188;BQB=0.966083;DP=2714;DP4=1365,1232,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.12165e-07;MQSB=0.962382;RPB=0.830474;SGB=35.9843;VDB=0.701818;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.6:9506227 chr06:009506227 0 W/9506227-9506227 W607-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2780-S.SNP.6:9510510 chr06:009510510 0 W/9510510-9510510 FN2780-S SNP G -> T AC=1;AN=198;BQB=0.998399;DP=3929;DP4=2026,1583,18,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000254518;MQB=3.3835e-12;MQSB=0.837284;RPB=0.637331;SGB=95.5;VDB=0.841481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.6:9522558 chr06:009522558 0 W/9522558-9522558 FN3552-S SNP A -> T AC=1;AN=188;BQB=0.839017;DP=3541;DP4=1656,1764,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=14;MQ0F=0.420785;MQB=0.194042;MQSB=0.00515315;RPB=0.552131;SGB=60.7873;VDB=0.86191;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K75*|1014|LOC_Os06g16580|protein_coding|CODING|LOC_Os06g16580.1|1|1);LOF=(LOC_Os06g16580|LOC_Os06g16580|1|1.00);NMD=(LOC_Os06g16580|LOC_Os06g16580|1|1.00) FN2666-S.SNP.6:9526565 chr06:009526565 0 W/9526565-9526565 FN2666-S SNP G -> T AC=1;AN=200;BQB=0.953914;DP=3014;DP4=1959,741,15,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38355e-09;MQSB=0.00544608;RPB=0.991766;SGB=11.0951;VDB=0.633565;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.6:9526961 chr06:009526961 0 W/9526961-9526961 FN771-S Single Base Substitution C-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1193-S.SNP.6:9532881 chr06:009532881 0 W/9532881-9532881 FN1193-S Single Base Substitution A-G INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1690-S.SNP.6:9536934 chr06:009536934 0 W/9536934-9536934 FN1690-S SNP C -> T AC=1;AN=188;BQB=0.0321335;DP=3618;DP4=1794,1781,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17986e-05;MQSB=0.991265;RPB=0.995966;SGB=-203.962;VDB=0.415733;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.6:9538157 chr06:009538157 0 W/9538157-9538157 FN486-S Single Base Substitution C-A INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2484.SNP.6:9556268 chr06:009556268 0 W/9556268-9556268 FN2484 SNP G -> T AC=1;AN=200;BQB=0.677022;DP=3332;DP4=1647,1381,7,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00090036;MQB=1.81018e-05;MQSB=0.377895;RPB=0.727513;SGB=43.8747;VDB=0.00360479;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.6:9565965 chr06:009565965 0 W/9565965-9565965 FN985-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1355-S.SNP.6:9566764 chr06:009566764 0 W/9566764-9566764 FN1355-S Single Base Substitution A-C INTRON HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN510-S.SNP.6:9569391 chr06:009569391 0 W/9569391-9569391 FN510-S Single Base Substitution T-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3657-S.SNP.6:9570582 chr06:009570582 0 W/9570582-9570582 FN3657-S SNP A -> T AC=1;AN=190;BQB=0.93614;DP=2629;DP4=1453,986,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.80355e-06;MQSB=0.00995285;RPB=0.519665;SGB=21.1058;VDB=0.881642;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.6:9574330 chr06:009574330 0 W/9574330-9574330 FN3956-S SNP C -> T AC=1;AN=168;BQB=0.0302792;DP=2572;DP4=1087,1397,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00192939;MQSB=0.997106;RPB=0.978268;SGB=34.748;VDB=0.871867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.6:9577875 chr06:009577875 0 W/9577875-9577875 FN2492 SNP C -> T AC=1;AN=200;BQB=0.747134;DP=4301;DP4=2042,2070,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.18505e-08;MQSB=0.993053;RPB=0.778283;SGB=40.2696;VDB=0.212824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.6:9580578 chr06:009580578 0 W/9580578-9580578 FN2495 SNP C -> G AC=1;AN=200;BQB=0.999489;DP=4130;DP4=2106,1761,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20693e-09;MQSB=0.972441;RPB=0.992423;SGB=72.6852;VDB=0.540352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-330.SNP.6:9585376 chr06:009585376 0 W/9585376-9585376 FN-330 Single Base Substitution G-A INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN2580-S.SNP.6:9593225 chr06:009593225 0 W/9593225-9593225 FN2580-S SNP C -> G AC=1;AN=198;BQB=0.943778;DP=5200;DP4=1973,2772,17,32;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0298077;MQB=0.172946;MQSB=4.53238e-19;RPB=0.0777587;SGB=58.7981;VDB=0.261942;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.6:9595113 chr06:009595113 0 W/9595113-9595113 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2495.SNP.6:9595357 chr06:009595357 0 W/9595357-9595357 FN2495 SNP T -> C AC=2;AN=200;BQB=0.22639;DP=4717;DP4=2233,2166,10,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000211999;MQB=9.68485e-09;MQSB=0.00530887;RPB=0.920339;SGB=54.6902;VDB=0.873965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.6:9597385 chr06:009597385 0 W/9597385-9597385 FN2436 SNP A -> T AC=1;AN=200;BQB=0.765165;DP=4721;DP4=2369,1958,6,11;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0313493;MQB=0.63341;MQSB=0.945597;RPB=0.57153;SGB=7.88476;VDB=0.881541;EFF=INTRON(MODIFIER||||763|LOC_Os06g16670|protein_coding|CODING|LOC_Os06g16670.1|3|1) FN949-S.SNP.6:9597583 chr06:009597583 0 W/9597583-9597583 FN949-S Single Base Substitution C-T INTRON HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2620-S.SNP.6:9622952 chr06:009622952 0 W/9622952-9622952 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.854611;DP=3997;DP4=1709,2067,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00125094;MQB=8.29379e-06;MQSB=0.00437803;RPB=0.893449;SGB=127.666;VDB=0.900935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.6:9623076 chr06:009623076 0 W/9623076-9623076 FN1170-S Single Base Substitution C-A INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-145.SNP.6:9623544 chr06:009623544 0 W/9623544-9623544 FN-145 Single Base Substitution C-T INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3990-S.SNP.6:9633437 chr06:009633437 0 W/9633437-9633437 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.997255;DP=2432;DP4=1150,1129,9,22;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0365954;MQB=0.00452463;MQSB=2.17184e-14;RPB=0.872317;SGB=96.5026;VDB=0.513325;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.6:9634062 chr06:009634062 0 W/9634062-9634062 FN880-S Single Base Substitution C-T INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1262-S.SNP.6:9637563 chr06:009637563 0 W/9637563-9637563 FN1262-S Single Base Substitution A-G INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN4117-S.SNP.6:9638056 chr06:009638056 0 W/9638056-9638056 FN4117-S SNP A -> G AC=2;AN=182;BQB=0.862827;DP=1717;DP4=1360,294,12,0;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.00582411;MQB=5.54335e-06;MQSB=0.948055;RPB=0.305261;SGB=15.6115;VDB=0.353483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V205A|246|LOC_Os06g16710|protein_coding|CODING|LOC_Os06g16710.1|3|1) FN2138-S.SNP.6:9642642 chr06:009642642 0 W/9642642-9642642 FN2138-S SNP C -> T AC=1;AN=168;BQB=0.681564;DP=3720;DP4=1996,1659,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.0016129;MQB=3.20174e-13;MQSB=0.962144;RPB=0.995269;SGB=-11.4952;VDB=0.574289;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.6:9644612 chr06:009644612 0 W/9644612-9644612 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3339-S.SNP.6:9646170 chr06:009646170 0 W/9646170-9646170 FN3339-S SNP C -> G AC=1;AN=184;BQB=0.985644;DP=2680;DP4=1342,1275,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00261194;MQB=3.64015e-05;MQSB=0.517963;RPB=0.47007;SGB=30.6558;VDB=0.459606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E426D|627|LOC_Os06g16720|protein_coding|CODING|LOC_Os06g16720.1|4|1) FN-120.SNP.6:9646634 chr06:009646634 0 W/9646634-9646634 FN-120 Single Base Substitution T-C INTRON HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1532-S.SNP.6:9650749 chr06:009650749 0 W/9650749-9650749 FN1532-S Single Base Substitution G-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2458.SNP.6:9650749 chr06:009650749 0 W/9650749-9650749 FN2458 SNP G -> A AC=2;AN=200;BQB=0.341694;DP=4707;DP4=1970,2326,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.4393e-18;MQSB=0.699583;RPB=0.0488518;SGB=183.209;VDB=0.462297;EFF=INTRON(MODIFIER||||254|LOC_Os06g16730|protein_coding|CODING|LOC_Os06g16730.1|2|1) FN3983-S.SNP.6:9656552 chr06:009656552 0 W/9656552-9656552 FN3983-S SNP T -> C AC=1;AN=168;BQB=0.425305;DP=2342;DP4=1171,1088,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.83065e-08;MQSB=0.999189;RPB=0.990494;SGB=29.4772;VDB=0.766257;EFF=INTRON(MODIFIER||||261|LOC_Os06g16740|protein_coding|CODING|LOC_Os06g16740.1|3|1) FN2377.SNP.6:9661296 chr06:009661296 0 W/9661296-9661296 FN2377 SNP C -> T AC=1;AN=192;BQB=0.79998;DP=4746;DP4=2394,2069,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.20714e-14;MQSB=0.93921;RPB=0.964116;SGB=22.9983;VDB=0.724442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.6:9667472 chr06:009667472 0 W/9667472-9667472 FN-332 Single Base Substitution T-C INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3347-S.SNP.6:9670685 chr06:009670685 0 W/9670685-9670685 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.997676;DP=3462;DP4=1873,1474,20,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.17007e-17;MQSB=0.995079;RPB=0.92679;SGB=125.613;VDB=0.157926;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.6:9673162 chr06:009673162 0 W/9673162-9673162 FN2547-S SNP A -> G AC=1;AN=198;BQB=0.531274;DP=4040;DP4=1822,1973,9,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00026561;MQSB=0.934079;RPB=0.961552;SGB=11.1786;VDB=0.705725;EFF=INTRON(MODIFIER||||84|LOC_Os06g16750|protein_coding|CODING|LOC_Os06g16750.1|1|1) FN1409-S.SNP.6:9673495 chr06:009673495 0 W/9673495-9673495 FN1409-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g16750 expressed protein SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-279.SNP.6:9675605 chr06:009675605 0 W/9675605-9675605 FN-279 Single Base Substitution T-C INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2232-S.SNP.6:9681069 chr06:009681069 0 W/9681069-9681069 FN2232-S SNP A -> G AC=1;AN=190;BQB=0.27158;DP=4943;DP4=2208,2357,8,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.46563e-11;MQSB=0.611817;RPB=0.596916;SGB=-9.89872;VDB=0.488627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.6:9683594 chr06:009683594 0 W/9683594-9683594 FN2106-S SNP T -> A AC=1;AN=168;BQB=0.151049;DP=3900;DP4=2033,1824,21,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=9.91186e-09;MQSB=0.772277;RPB=0.683035;SGB=-105.77;VDB=0.649775;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.6:9688186 chr06:009688186 0 W/9688186-9688186 FN559-S Single Base Substitution G-A INTERGENIC HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1618-S.SNP.6:9689571 chr06:009689571 0 W/9689571-9689571 FN1618-S Single Base Substitution C-T INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2116-S.SNP.6:9689729 chr06:009689729 0 W/9689729-9689729 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.746796;DP=4204;DP4=2138,2016,19,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18411e-17;MQSB=0.996032;RPB=0.852663;SGB=-136.6;VDB=0.585284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.6:9690153 chr06:009690153 0 W/9690153-9690153 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.167933;DP=5148;DP4=2397,2488,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93383e-15;MQSB=0.822787;RPB=0.834267;SGB=104.921;VDB=0.142449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.6:9690764 chr06:009690764 0 W/9690764-9690764 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.10868;DP=3455;DP4=1607,1765,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92925e-07;MQSB=0.997056;RPB=0.952829;SGB=-14.5109;VDB=0.366085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.6:9691894 chr06:009691894 0 W/9691894-9691894 FN2584-S SNP T -> A AC=1;AN=198;BQB=0.916435;DP=4218;DP4=2054,1984,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.0535e-14;MQSB=0.867428;RPB=0.897379;SGB=97.671;VDB=0.232047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.6:9692444 chr06:009692444 0 W/9692444-9692444 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.989762;DP=4345;DP4=2063,1841,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38657e-11;MQSB=0.163451;RPB=0.859858;SGB=39.7248;VDB=0.502671;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.6:9693748 chr06:009693748 0 W/9693748-9693748 FN795-S Single Base Substitution G-T INTERGENIC HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN795-S.SNP.6:9693749 chr06:009693749 0 W/9693749-9693749 FN795-S Single Base Substitution A-T INTERGENIC HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN-96.SNP.6:9694307 chr06:009694307 0 W/9694307-9694307 FN-96 Single Base Substitution C-T INTERGENIC HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN-231.SNP.6:9697005 chr06:009697005 0 W/9697005-9697005 FN-231 Single Base Substitution G-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2267-S.SNP.6:9697967 chr06:009697967 0 W/9697967-9697967 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.79346;DP=4991;DP4=1904,2674,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.24665e-09;MQSB=0.983165;RPB=0.621929;SGB=10.3266;VDB=0.340765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.6:9699199 chr06:009699199 0 W/9699199-9699199 FN2735-S SNP C -> A AC=1;AN=200;BQB=0.942635;DP=5106;DP4=2352,2443,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17752e-08;MQSB=0.905746;RPB=0.404076;SGB=36.6644;VDB=0.498311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.6:9703054 chr06:009703054 0 W/9703054-9703054 FN2086-S SNP A -> T AC=2;AN=168;BQB=0.9511;DP=3751;DP4=1734,1927,22,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.96771e-18;MQSB=0.864041;RPB=0.537186;SGB=-399.139;VDB=0.0322977;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.6:9703908 chr06:009703908 0 W/9703908-9703908 FN4183-S SNP G -> C AC=1;AN=170;BQB=0.207667;DP=2470;DP4=1128,1256,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07263e-07;MQSB=0.796224;RPB=0.999968;SGB=78.9707;VDB=0.996508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.6:9704322 chr06:009704322 0 W/9704322-9704322 FN3600-S SNP C -> T AC=1;AN=190;BQB=0.549597;DP=2365;DP4=1005,1284,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.82693e-07;MQSB=0.997399;RPB=0.998075;SGB=39.6545;VDB=0.696731;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.6:9706472 chr06:009706472 0 W/9706472-9706472 FN691-S Single Base Substitution G-A INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN1028-S.SNP.6:9709265 chr06:009709265 0 W/9709265-9709265 FN1028-S Single Base Substitution C-T INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2598-S.SNP.6:9709265 chr06:009709265 0 W/9709265-9709265 FN2598-S SNP C -> T AC=2;AN=198;BQB=0.509213;DP=4059;DP4=2021,1787,19,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.07469e-22;MQSB=0.996661;RPB=0.818546;SGB=130.027;VDB=0.0194694;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.6:9709265 chr06:009709265 0 W/9709265-9709265 FN891-S Single Base Substitution C-T INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN-92.SNP.6:9715275 chr06:009715275 0 W/9715275-9715275 FN-92 Single Base Substitution T-G UTR_3_PRIME HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2767-S.SNP.6:9721124 chr06:009721124 0 W/9721124-9721124 FN2767-S SNP C -> T AC=1;AN=198;BQB=0.931103;DP=3433;DP4=1726,1530,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.42664e-12;MQSB=0.977167;RPB=0.983119;SGB=39.7248;VDB=0.444514;EFF=INTRON(MODIFIER||||964|LOC_Os06g16790|protein_coding|CODING|LOC_Os06g16790.1|2|1) FN881-S.SNP.6:9726316 chr06:009726316 0 W/9726316-9726316 FN881-S Single Base Substitution T-C INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2302.SNP.6:9730038 chr06:009730038 0 W/9730038-9730038 FN2302 SNP C -> T AC=1;AN=192;BQB=0.656861;DP=4384;DP4=2032,1953,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95277e-07;MQSB=0.992829;RPB=0.804537;SGB=49.2105;VDB=0.845817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.6:9734595 chr06:009734595 0 W/9734595-9734595 FN3378-S SNP C -> G AC=2;AN=184;BQB=0.215712;DP=2631;DP4=1406,1125,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27825e-07;MQSB=0.999855;RPB=0.500493;SGB=49.835;VDB=0.536368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.6:9736108 chr06:009736108 0 W/9736108-9736108 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.920726;DP=2771;DP4=1258,1436,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.0908e-05;MQSB=0.791855;RPB=0.143151;SGB=26.3271;VDB=0.487912;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.6:9736110 chr06:009736110 0 W/9736110-9736110 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.730335;DP=2756;DP4=1248,1423,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29584e-05;MQSB=0.719071;RPB=0.0495044;SGB=25.439;VDB=0.201801;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.6:9739661 chr06:009739661 0 W/9739661-9739661 FN-90 Single Base Substitution A-G INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-216.SNP.6:9749258 chr06:009749258 0 W/9749258-9749258 FN-216 Single Base Substitution G-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN622-S.SNP.6:9757575 chr06:009757575 0 W/9757575-9757575 FN622-S Single Base Substitution G-T INTRON HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN622-S.SNP.6:9757576 chr06:009757576 0 W/9757576-9757576 FN622-S Single Base Substitution A-T INTRON HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN622-S.SNP.6:9757577 chr06:009757577 0 W/9757577-9757577 FN622-S Single Base Substitution C-T INTRON HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2190-S.SNP.6:9758854 chr06:009758854 0 W/9758854-9758854 FN2190-S SNP T -> A AC=1;AN=190;BQB=0.10422;DP=4511;DP4=2227,1892,21,13;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0115274;MQB=0.0522002;MQSB=0;RPB=0.693339;SGB=-43.4624;VDB=0.82654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T355S|620|LOC_Os06g16850|protein_coding|CODING|LOC_Os06g16850.1|1|1) FN3464-S.SNP.6:9771489 chr06:009771489 0 W/9771489-9771489 FN3464-S SNP G -> A AC=2;AN=184;BQB=0.990058;DP=2763;DP4=1293,1334,9,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.68618e-14;MQSB=0.994146;RPB=0.517129;SGB=85.0529;VDB=0.897505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.6:9771571 chr06:009771571 0 W/9771571-9771571 FN1072-S Single Base Substitution A-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3591-S.SNP.6:9771662 chr06:009771662 0 W/9771662-9771662 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.970244;DP=2828;DP4=1533,1204,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.59602e-07;MQSB=0.644423;RPB=0.930195;SGB=53.5223;VDB=0.704797;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.6:9772501 chr06:009772501 0 W/9772501-9772501 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN424-S.SNP.6:9772502 chr06:009772502 0 W/9772502-9772502 FN424-S Single Base Substitution G-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1490-S.SNP.6:9775567 chr06:009775567 0 W/9775567-9775567 FN1490-S Single Base Substitution A-T INTERGENIC Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN1462-S.SNP.6:9778746 chr06:009778746 0 W/9778746-9778746 FN1462-S Single Base Substitution C-T INTRON HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN992-S.SNP.6:9789466 chr06:009789466 0 W/9789466-9789466 FN992-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g16890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN1586-S.SNP.6:9790648 chr06:009790648 0 W/9790648-9790648 FN1586-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g16890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2540-S.SNP.6:9792388 chr06:009792388 0 W/9792388-9792388 FN2540-S SNP T -> A AC=1;AN=198;BQB=0.751266;DP=8161;DP4=3409,4404,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.066781;MQB=0.0459162;MQSB=0.0828225;RPB=0.974626;SGB=60.4858;VDB=0.451928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F979Y|1783|LOC_Os06g16890|protein_coding|CODING|LOC_Os06g16890.1|3|1) FN3875-S.SNP.6:9811369 chr06:009811369 0 W/9811369-9811369 FN3875-S SNP G -> A AC=1;AN=158;BQB=0.968188;DP=2454;DP4=1169,1176,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000910798;MQSB=5.69181e-15;RPB=0.143675;SGB=33.9591;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.6:9815939 chr06:009815939 0 W/9815939-9815939 FN620-S Single Base Substitution G-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3446-S.SNP.6:9823921 chr06:009823921 0 W/9823921-9823921 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.669497;DP=3098;DP4=1511,1526,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000154387;MQSB=0.955305;RPB=0.692491;SGB=25.1826;VDB=0.193383;EFF=INTRON(MODIFIER||||111|LOC_Os06g16950|protein_coding|CODING|LOC_Os06g16950.1|2|1) FN454-S.SNP.6:9831102 chr06:009831102 0 W/9831102-9831102 FN454-S Single Base Substitution G-C INTERGENIC HOMO SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN-97.SNP.6:9838983 chr06:009838983 0 W/9838983-9838983 FN-97 Single Base Substitution T-A INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1285-S.SNP.6:9842724 chr06:009842724 0 W/9842724-9842724 FN1285-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN3369-S.SNP.6:9849477 chr06:009849477 0 W/9849477-9849477 FN3369-S SNP G -> A AC=1;AN=184;BQB=0.139756;DP=2446;DP4=1229,1144,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.45678e-07;MQSB=0.965002;RPB=0.328304;SGB=28.3187;VDB=0.0464497;EFF=INTRON(MODIFIER||||1163|LOC_Os06g16980|protein_coding|CODING|LOC_Os06g16980.1|8|1),INTRON(MODIFIER||||1163|LOC_Os06g16980|protein_coding|CODING|LOC_Os06g16980.2|8|1) FN1279-S.SNP.6:9854746 chr06:009854746 0 W/9854746-9854746 FN1279-S Single Base Substitution A-G INTRON HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2243-S.SNP.6:9862661 chr06:009862661 0 W/9862661-9862661 FN2243-S SNP C -> T AC=1;AN=190;BQB=0.63834;DP=4640;DP4=2239,2100,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000215517;MQB=1.33474e-05;MQSB=0.551162;RPB=0.556488;SGB=36.1006;VDB=0.931665;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A174|350|LOC_Os06g17000|protein_coding|CODING|LOC_Os06g17000.1|3|1) FN-325.SNP.6:9873073 chr06:009873073 0 W/9873073-9873073 FN-325 Single Base Substitution G-A INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2626-S.SNP.6:9873073 chr06:009873073 0 W/9873073-9873073 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.995823;DP=4878;DP4=1889,2589,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000151117;MQSB=0.992965;RPB=0.437392;SGB=-3.35138;VDB=0.152536;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.6:9873073 chr06:009873073 0 W/9873073-9873073 FN424-S Single Base Substitution G-A INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN569-S.SNP.6:9873073 chr06:009873073 0 W/9873073-9873073 FN569-S Single Base Substitution G-A INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN2379.SNP.6:9874595 chr06:009874595 0 W/9874595-9874595 FN2379 SNP C -> T AC=1;AN=192;BQB=0.0848641;DP=4428;DP4=2051,2094,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0801716;MQB=0.103756;MQSB=0;RPB=0.999917;SGB=103.938;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.6:9880558 chr06:009880558 0 W/9880558-9880558 FN2243-S SNP C -> A AC=1;AN=190;BQB=0.7025;DP=4344;DP4=2132,1830,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0103591;MQB=0.327696;MQSB=0.572151;RPB=0.765107;SGB=32.5467;VDB=0.955667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A1900S|2091|LOC_Os06g17040|protein_coding|CODING|LOC_Os06g17040.1|2|1) FN2619-S.SNP.6:9885137 chr06:009885137 0 W/9885137-9885137 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.796443;DP=4922;DP4=2559,2014,44,50;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0540431;MQB=1.42164e-24;MQSB=1.1194e-11;RPB=0.231022;SGB=51.6407;VDB=0.4475;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A397|2091|LOC_Os06g17040|protein_coding|CODING|LOC_Os06g17040.1|1|1) FN988-S.SNP.6:9888221 chr06:009888221 0 W/9888221-9888221 FN988-S Single Base Substitution C-T INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN696-S.SNP.6:9888541 chr06:009888541 0 W/9888541-9888541 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3455-S.SNP.6:9889761 chr06:009889761 0 W/9889761-9889761 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.84165;DP=3029;DP4=1539,1411,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000330142;MQB=4.24615e-05;MQSB=0.52062;RPB=0.993448;SGB=32.2261;VDB=0.233838;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.6:9896600 chr06:009896600 0 W/9896600-9896600 FN3433-S SNP T -> A AC=2;AN=184;BQB=0.976405;DP=2249;DP4=1292,823,18,5;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000444642;MQB=1.75558e-12;MQSB=0.48056;RPB=0.85771;SGB=98.4821;VDB=0.833733;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.6:9896600 chr06:009896600 0 W/9896600-9896600 FN884-S Single Base Substitution T-A INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN-265.SNP.6:9899381 chr06:009899381 0 W/9899381-9899381 FN-265 Single Base Substitution T-A INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN579-S.SNP.6:9904842 chr06:009904842 0 W/9904842-9904842 FN579-S Single Base Substitution G-A INTRON HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2536-S.SNP.6:9905546 chr06:009905546 0 W/9905546-9905546 FN2536-S SNP A -> G AC=1;AN=198;BQB=0.93757;DP=4504;DP4=2205,2068,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.65009e-10;MQSB=0.988751;RPB=0.999881;SGB=29.3443;VDB=0.709092;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H15|136|LOC_Os06g17080|protein_coding|CODING|LOC_Os06g17080.1|1|1) FN767-S.SNP.6:9905935 chr06:009905935 0 W/9905935-9905935 FN767-S Single Base Substitution G-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN-305.SNP.6:9907388 chr06:009907388 0 W/9907388-9907388 FN-305 Single Base Substitution C-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3968-S.SNP.6:9907388 chr06:009907388 0 W/9907388-9907388 FN3968-S SNP C -> T AC=1;AN=168;BQB=0.997717;DP=2681;DP4=1283,1311,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.15907e-08;MQSB=0.843804;RPB=0.996785;SGB=38.1788;VDB=0.375798;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.6:9910664 chr06:009910664 0 W/9910664-9910664 FN1650-S Single Base Substitution T-A INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3769-S.SNP.6:9915404 chr06:009915404 0 W/9915404-9915404 FN3769-S SNP C -> T AC=1;AN=188;BQB=0.953333;DP=2584;DP4=1384,1131,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000217521;MQSB=0.889089;RPB=0.222025;SGB=30.8803;VDB=0.316575;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C290Y|1021|LOC_Os06g17100|protein_coding|CODING|LOC_Os06g17100.1|1|1) FN2269-S.SNP.6:9919032 chr06:009919032 0 W/9919032-9919032 FN2269-S SNP C -> T AC=1;AN=190;BQB=0.965215;DP=5433;DP4=2587,2499,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28714e-09;MQSB=0.959417;RPB=0.253135;SGB=43.2083;VDB=0.37356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.6:9929682 chr06:009929682 0 W/9929682-9929682 FN3438-S SNP G -> T AC=1;AN=184;BQB=0.917655;DP=2991;DP4=1504,1334,16,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0271e-16;MQSB=0.674604;RPB=0.669383;SGB=116.569;VDB=0.742486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.6:9929984 chr06:009929984 0 W/9929984-9929984 FN3325-S SNP A -> G AC=1;AN=184;BQB=0.991513;DP=2973;DP4=1627,1239,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30802e-06;MQSB=0.991757;RPB=0.565614;SGB=44.2207;VDB=0.920734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.6:9932238 chr06:009932238 0 W/9932238-9932238 FN1688-S SNP G -> T AC=1;AN=188;BQB=1.81597e-07;DP=3625;DP4=1726,1838,8,31;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.81594e-08;MQSB=0.955134;RPB=0.500939;SGB=-699.111;VDB=0.229236;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.6:9936867 chr06:009936867 0 W/9936867-9936867 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.958799;DP=2574;DP4=1285,1207,2,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.25885e-05;MQSB=0.990841;RPB=0.360139;SGB=26.0691;VDB=0.399755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.6:9936920 chr06:009936920 0 W/9936920-9936920 FN2725-S SNP G -> T AC=1;AN=200;BQB=0.737161;DP=4096;DP4=1881,1963,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41453e-05;MQSB=0.89242;RPB=0.962397;SGB=31.2392;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3561-S.SNP.6:9937273 chr06:009937273 0 W/9937273-9937273 FN3561-S SNP G -> A AC=1;AN=188;BQB=0.990631;DP=3288;DP4=1386,1820,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.45785e-13;MQSB=0.9337;RPB=0.985231;SGB=108.042;VDB=0.381245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.6:9940878 chr06:009940878 0 W/9940878-9940878 FN3825-S SNP T -> C AC=2;AN=190;BQB=0.668345;DP=2760;DP4=1642,859,20,12;HOB=0.020831;ICB=0.494793;MQ=13;MQ0F=0.594565;MQB=0.743167;MQSB=0;RPB=0.311359;SGB=-6.02158;VDB=0.98308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.6:9948995 chr06:009948995 0 W/9948995-9948995 FN1284-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g17160 transposon protein, putative, unclassified, expressed SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2418.SNP.6:9955479 chr06:009955479 0 W/9955479-9955479 FN2418 SNP A -> T AC=1;AN=200;BQB=0.870978;DP=3144;DP4=485,2507,2,6;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0750636;MQB=0.11311;MQSB=6.42545e-15;RPB=0.816904;SGB=18.639;VDB=0.0686942;EFF=INTRON(MODIFIER||||149|LOC_Os06g17170|protein_coding|CODING|LOC_Os06g17170.1|1|1) FN2173-S.SNP.6:9976871 chr06:009976871 0 W/9976871-9976871 FN2173-S SNP C -> T AC=1;AN=168;BQB=0.183635;DP=3357;DP4=1646,1661,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.21442e-10;MQSB=0.920129;RPB=0.577637;SGB=-11.0644;VDB=0.42121;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L157|159|LOC_Os06g17220|protein_coding|CODING|LOC_Os06g17220.1|2|1) FN1471-S.SNP.6:9976936 chr06:009976936 0 W/9976936-9976936 FN1471-S SNP C -> T AC=1;AN=188;BQB=0.994459;DP=3355;DP4=1354,1961,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.07216e-14;MQSB=0.975052;RPB=0.50067;SGB=-9.56681;VDB=0.040348;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.6:9977294 chr06:009977294 0 W/9977294-9977294 FN854-S Single Base Substitution A-T INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN-167.SNP.6:9989499 chr06:009989499 0 W/9989499-9989499 FN-167 Single Base Substitution A-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-167.SNP.6:9989500 chr06:009989500 0 W/9989500-9989500 FN-167 Single Base Substitution A-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN4023-S.SNP.6:9991487 chr06:009991487 0 W/9991487-9991487 FN4023-S SNP G -> A AC=1;AN=168;BQB=0.248635;DP=2317;DP4=892,1330,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000147654;MQSB=0.70806;RPB=0.700579;SGB=14.8923;VDB=0.0231389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.6:9993231 chr06:009993231 0 W/9993231-9993231 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.971235;DP=2375;DP4=1234,1063,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82198e-10;MQSB=0.927652;RPB=0.995341;SGB=76.4186;VDB=0.615427;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I25|490|LOC_Os06g17250|protein_coding|CODING|LOC_Os06g17250.1|1|1) FN3748-S.SNP.6:10002197 chr06:010002197 0 W/10002197-10002197 FN3748-S SNP G -> T AC=1;AN=190;BQB=0.90261;DP=3697;DP4=2137,1379,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.51757e-06;MQSB=0.891724;RPB=0.247826;SGB=28.9929;VDB=0.675773;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.6:10003125 chr06:010003125 0 W/10003125-10003125 FN1520-S Single Base Substitution T-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1048-S.SNP.6:10003129 chr06:010003129 0 W/10003129-10003129 FN1048-S Single Base Substitution A-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. W279-4-1.SNP.6:10013825 chr06:010013825 0 W/10013825-10013825 W279-4-1 Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3310-S.SNP.6:10015642 chr06:010015642 0 W/10015642-10015642 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.469358;DP=2761;DP4=1314,1347,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.63837e-09;MQSB=0.928375;RPB=0.0855331;SGB=63.9222;VDB=0.30485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E244K|700|LOC_Os06g17290|protein_coding|CODING|LOC_Os06g17290.1|2|1) FN-342.SNP.6:10022789 chr06:010022789 0 W/10022789-10022789 FN-342 Single Base Substitution G-A INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3711-S.SNP.6:10024428 chr06:010024428 0 W/10024428-10024428 FN3711-S SNP G -> T AC=1;AN=190;BQB=0.978697;DP=3167;DP4=1543,1481,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.40631e-10;MQSB=0.992465;RPB=0.697675;SGB=76.4186;VDB=0.700604;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.6:10029465 chr06:010029465 0 W/10029465-10029465 FN1670-S SNP A -> G AC=1;AN=188;BQB=0.147917;DP=2653;DP4=1292,1325,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00127212;MQSB=0.833218;RPB=0.599677;SGB=18.4463;VDB=0.606925;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.6:10034418 chr06:010034418 0 W/10034418-10034418 FN-361 Single Base Substitution C-T INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3815-S.SNP.6:10066118 chr06:010066118 0 W/10066118-10066118 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.796188;DP=2455;DP4=1176,1188,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.31729e-06;MQSB=0.999952;RPB=0.938052;SGB=13.4442;VDB=0.437445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P432Q|499|LOC_Os06g17370|protein_coding|CODING|LOC_Os06g17370.1|3|1) FN1285-S.SNP.6:10067600 chr06:010067600 0 W/10067600-10067600 FN1285-S Single Base Substitution G-A STOP_GAINED HET LOC_Os06g17370 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN-350.SNP.6:10072266 chr06:010072266 0 W/10072266-10072266 FN-350 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g17380 retrotransposon protein, putative, unclassified, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1212-S.SNP.6:10077526 chr06:010077526 0 W/10077526-10077526 FN1212-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN-87.SNP.6:10079213 chr06:010079213 0 W/10079213-10079213 FN-87 Single Base Substitution A-T INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN470-S.SNP.6:10087059 chr06:010087059 0 W/10087059-10087059 FN470-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN_N1-169-1.SNP.6:10102133 chr06:010102133 0 W/10102133-10102133 FN_N1-169-1 Single Base Substitution G-T HET LOC_Os06g17410 dof zinc finger domain containing protein, putative, expressed SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2279-S.SNP.6:10103741 chr06:010103741 0 W/10103741-10103741 FN2279-S SNP T -> C AC=1;AN=190;BQB=0.307885;DP=5088;DP4=2753,2033,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10613e-17;MQSB=0.914079;RPB=0.77131;SGB=131.065;VDB=0.454463;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.6:10109689 chr06:010109689 0 W/10109689-10109689 FN584-S Single Base Substitution C-G INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1413-S.SNP.6:10109716 chr06:010109716 0 W/10109716-10109716 FN1413-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1413-S.SNP.6:10109717 chr06:010109717 0 W/10109717-10109717 FN1413-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN4120-S.SNP.6:10112667 chr06:010112667 0 W/10112667-10112667 FN4120-S SNP C -> T AC=2;AN=182;BQB=0.655701;DP=2954;DP4=1254,1622,10,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.35884e-15;MQSB=0.983641;RPB=0.775923;SGB=98.8232;VDB=0.745072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.6:10114216 chr06:010114216 0 W/10114216-10114216 FN2123-S SNP A -> G AC=1;AN=168;BQB=0.0425732;DP=3551;DP4=1999,1502,16,19;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=4.66649e-05;MQSB=1.16713e-05;RPB=0.848812;SGB=-165.748;VDB=0.109828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.6:10115508 chr06:010115508 0 W/10115508-10115508 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.979968;DP=4447;DP4=2337,1855,19,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.67082e-13;MQSB=0.989778;RPB=0.991702;SGB=49.1985;VDB=0.93482;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.6:10116772 chr06:010116772 0 W/10116772-10116772 FN-114 Single Base Substitution C-A INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. 705-3.SNP.6:10116809 chr06:010116809 0 W/10116809-10116809 705-3 Single Base Substitution A-G INTERGENIC HET SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. 705-7.SNP.6:10116809 chr06:010116809 0 W/10116809-10116809 705-7 Single Base Substitution A-G INTERGENIC Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN-363.SNP.6:10119011 chr06:010119011 0 W/10119011-10119011 FN-363 Single Base Substitution C-T INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. W42-1-3S-1.SNP.6:10121500 chr06:010121500 0 W/10121500-10121500 W42-1-3S-1 Single Base Substitution T-G INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1301-S.SNP.6:10133888 chr06:010133888 0 W/10133888-10133888 FN1301-S Single Base Substitution A-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3857-S.SNP.6:10138024 chr06:010138024 0 W/10138024-10138024 FN3857-S SNP C -> A AC=1;AN=158;BQB=0.842501;DP=2192;DP4=980,1141,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.20693e-07;MQSB=0.998878;RPB=0.987044;SGB=23.9652;VDB=0.392568;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I63|250|LOC_Os06g17480|protein_coding|CODING|LOC_Os06g17480.1|1|1) FN3857-S.SNP.6:10138025 chr06:010138025 0 W/10138025-10138025 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.99318;DP=2203;DP4=977,1145,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.09774e-06;MQSB=0.998075;RPB=0.960421;SGB=33.9591;VDB=0.729265;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q64*|250|LOC_Os06g17480|protein_coding|CODING|LOC_Os06g17480.1|1|1) FN2614-S.SNP.6:10142799 chr06:010142799 0 W/10142799-10142799 FN2614-S SNP A -> G AC=1;AN=198;BQB=0.121031;DP=4023;DP4=1843,2028,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.46111e-11;MQSB=0.910138;RPB=0.171266;SGB=58.1246;VDB=0.0554542;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN-146 Single Base Substitution C-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-268.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN-268 Single Base Substitution C-T INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-296.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN-296 Single Base Substitution C-T INTERGENIC HOMO SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-335.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-349.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN-349 Single Base Substitution C-T INTERGENIC HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2269-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN2269-S SNP C -> T AC=2;AN=190;BQB=0.99684;DP=5039;DP4=2323,2276,39,25;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0;MQB=2.6208e-20;MQSB=0.916096;RPB=0.985105;SGB=-56.8461;VDB=0.799823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN2366 SNP C -> T AC=2;AN=192;BQB=0.742393;DP=4976;DP4=2338,2242,31,19;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0;MQB=1.17334e-14;MQSB=0.0215901;RPB=0.618678;SGB=-50.14;VDB=0.431386;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN2415 SNP C -> T AC=2;AN=200;BQB=0.823271;DP=4578;DP4=2236,2012,21,11;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0;MQB=5.74235e-11;MQSB=0.340494;RPB=0.663308;SGB=105.163;VDB=0.689145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN3945-S SNP C -> T AC=1;AN=168;BQB=0.830267;DP=2608;DP4=1204,1255,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0;MQB=0.000150448;MQSB=0.364588;RPB=0.921189;SGB=17.3231;VDB=0.947111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN4132-S SNP C -> T AC=2;AN=182;BQB=0.920801;DP=2869;DP4=1397,1308,14,14;HOB=0.0217365;ICB=0.494567;MQ=36;MQ0F=0;MQB=4.91445e-11;MQSB=3.04808e-06;RPB=0.897439;SGB=55.7853;VDB=0.58312;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN597-S Single Base Substitution C-T INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN738-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN738-S Single Base Substitution C-T INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN754-S.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN754-S Single Base Substitution C-T INTERGENIC HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN_830-6-1.SNP.6:10146362 chr06:010146362 0 W/10146362-10146362 FN_830-6-1 Single Base Substitution C-T Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2594-S.SNP.6:10151755 chr06:010151755 0 W/10151755-10151755 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.327246;DP=4265;DP4=2051,2014,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000130373;MQSB=0.994599;RPB=0.931535;SGB=26.7492;VDB=0.45851;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V15|165|LOC_Os06g17500|protein_coding|CODING|LOC_Os06g17500.1|1|1) FN543-S.SNP.6:10178722 chr06:010178722 0 W/10178722-10178722 FN543-S Single Base Substitution G-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2469.SNP.6:10182052 chr06:010182052 0 W/10182052-10182052 FN2469 SNP G -> A AC=1;AN=200;BQB=0.641371;DP=3831;DP4=2004,1272,8,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.00566e-06;MQSB=0.590623;RPB=0.999977;SGB=-36.1052;VDB=0.573586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.6:10191356 chr06:010191356 0 W/10191356-10191356 FN1243-S Single Base Substitution G-A INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1243-S.SNP.6:10191357 chr06:010191357 0 W/10191357-10191357 FN1243-S Single Base Substitution A-T INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2789-S.SNP.6:10197534 chr06:010197534 0 W/10197534-10197534 FN2789-S SNP G -> T AC=1;AN=198;BQB=0.47254;DP=3939;DP4=1849,1804,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.00496227;MQSB=0.979419;RPB=0.5148;SGB=-1.81641;VDB=0.342371;EFF=INTERGENIC(MODIFIER||||||||||1) FN-330.SNP.6:10202955 chr06:010202955 0 W/10202955-10202955 FN-330 Single Base Substitution G-C INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1559-S.SNP.6:10202955 chr06:010202955 0 W/10202955-10202955 FN1559-S Single Base Substitution G-C INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1689-S.SNP.6:10202955 chr06:010202955 0 W/10202955-10202955 FN1689-S SNP G -> C AC=2;AN=188;BQB=0.979482;DP=2722;DP4=1381,1303,15,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.95386e-10;MQSB=0.0207844;RPB=0.433253;SGB=82.0471;VDB=0.755682;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.6:10202955 chr06:010202955 0 W/10202955-10202955 FN581-S Single Base Substitution G-C INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2412.SNP.6:10212257 chr06:010212257 0 W/10212257-10212257 FN2412 SNP T -> C AC=1;AN=200;BQB=0.993378;DP=4776;DP4=2280,2223,7,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.00867998;MQSB=0.35127;RPB=0.503521;SGB=68.0801;VDB=0.533394;EFF=INTRON(MODIFIER||||220|LOC_Os06g17590|protein_coding|CODING|LOC_Os06g17590.1|2|1) FN2274-S.SNP.6:10213883 chr06:010213883 0 W/10213883-10213883 FN2274-S SNP G -> T AC=2;AN=190;BQB=0.735875;DP=4065;DP4=2175,1654,30,20;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0;MQB=1.04028e-19;MQSB=4.57161e-06;RPB=0.605281;SGB=167.594;VDB=0.406638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L155I|202|LOC_Os06g17600|protein_coding|CODING|LOC_Os06g17600.1|1|1) FN2274-S.SNP.6:10213884 chr06:010213884 0 W/10213884-10213884 FN2274-S SNP G -> C AC=2;AN=190;BQB=0.99217;DP=4069;DP4=2165,1643,30,21;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0;MQB=3.84176e-19;MQSB=3.48732e-05;RPB=0.339197;SGB=171.148;VDB=0.348016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttG|F154L|202|LOC_Os06g17600|protein_coding|CODING|LOC_Os06g17600.1|1|1) FN-88.SNP.6:10279264 chr06:010279264 0 W/10279264-10279264 FN-88 Single Base Substitution T-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN1477-S.SNP.6:10285990 chr06:010285990 0 W/10285990-10285990 FN1477-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN4041-S.SNP.6:10286263 chr06:010286263 0 W/10286263-10286263 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.670207;DP=3039;DP4=1516,1427,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.000301748;MQSB=0.266247;RPB=0.719688;SGB=30.0193;VDB=0.825542;EFF=INTRON(MODIFIER||||237|LOC_Os06g17720|protein_coding|CODING|LOC_Os06g17720.1|2|1) FN-248.SNP.6:10345789 chr06:010345789 0 W/10345789-10345789 FN-248 Single Base Substitution G-A INTRON HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN1456-S.SNP.6:10346489 chr06:010346489 0 W/10346489-10346489 FN1456-S Single Base Substitution T-A INTRON HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1093-S.SNP.6:10357290 chr06:010357290 0 W/10357290-10357290 FN1093-S Single Base Substitution A-G INTRON HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1618-S.SNP.6:10359719 chr06:010359719 0 W/10359719-10359719 FN1618-S Single Base Substitution G-T INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3475-S.SNP.6:10361777 chr06:010361777 0 W/10361777-10361777 FN3475-S SNP C -> T AC=1;AN=184;BQB=0.955913;DP=3030;DP4=1363,1528,15,15;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0;MQB=4.7885e-12;MQSB=0.000655214;RPB=0.948225;SGB=61.1019;VDB=0.856305;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.6:10367951 chr06:010367951 0 W/10367951-10367951 FN1427-S Single Base Substitution G-T INTRON HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1427-S.SNP.6:10367952 chr06:010367952 0 W/10367952-10367952 FN1427-S Single Base Substitution A-G INTRON HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1427-S.SNP.6:10368176 chr06:010368176 0 W/10368176-10368176 FN1427-S Single Base Substitution T-C INTRON HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN880-S.SNP.6:10369897 chr06:010369897 0 W/10369897-10369897 FN880-S Single Base Substitution C-G INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN-218.SNP.6:10374103 chr06:010374103 0 W/10374103-10374103 FN-218 Single Base Substitution C-T INTRON HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3539-S.SNP.6:10376898 chr06:010376898 0 W/10376898-10376898 FN3539-S SNP T -> C AC=1;AN=188;BQB=0.843986;DP=2509;DP4=1209,1205,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.59152e-05;MQSB=0.98964;RPB=0.863657;SGB=28.8977;VDB=0.154969;EFF=INTRON(MODIFIER||||974|LOC_Os06g17880|protein_coding|CODING|LOC_Os06g17880.1|1|1) FN2120-S.SNP.6:10382602 chr06:010382602 0 W/10382602-10382602 FN2120-S SNP A -> G AC=1;AN=168;BQB=0.969004;DP=3154;DP4=1353,1751,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.000432399;MQSB=0.000506567;RPB=0.887576;SGB=-12.7876;VDB=0.877767;EFF=INTRON(MODIFIER||||91|LOC_Os06g17890|protein_coding|CODING|LOC_Os06g17890.1|1|1) FN1031-S.SNP.6:10384740 chr06:010384740 0 W/10384740-10384740 FN1031-S Single Base Substitution C-G INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3572-S.SNP.6:10385361 chr06:010385361 0 W/10385361-10385361 FN3572-S SNP G -> C AC=2;AN=188;BQB=0.922001;DP=2926;DP4=1556,1295,11,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.94373e-14;MQSB=0.997312;RPB=0.944398;SGB=94.4119;VDB=0.138033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.6:10390760 chr06:010390760 0 W/10390760-10390760 FN3692-S SNP T -> C AC=2;AN=190;BQB=0.999928;DP=2539;DP4=1039,1396,12,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.47991e-16;MQSB=0.977567;RPB=0.97136;SGB=89.4087;VDB=0.529817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.6:10396610 chr06:010396610 0 W/10396610-10396610 FN2204-S SNP A -> G AC=2;AN=190;BQB=0.992215;DP=2921;DP4=325,2341,2,18;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0;MQB=1.25198e-07;MQSB=5.79081e-07;RPB=0.975097;SGB=85.5263;VDB=0.561811;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.6:10397248 chr06:010397248 0 W/10397248-10397248 FN4201-S SNP G -> A AC=1;AN=170;BQB=0.655776;DP=2033;DP4=1071,914,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.000394396;MQSB=0.243554;RPB=0.86306;SGB=38.3207;VDB=0.584371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G51D|421|LOC_Os06g17910|protein_coding|CODING|LOC_Os06g17910.1|1|1) FN2572-S.SNP.6:10398457 chr06:010398457 0 W/10398457-10398457 FN2572-S SNP A -> T AC=2;AN=198;BQB=0.259716;DP=3797;DP4=1889,1708,40,19;HOB=0.019998;ICB=0.495001;MQ=30;MQ0F=0;MQB=0.00313944;MQSB=0.0238225;RPB=8.44856e-05;SGB=225.851;VDB=1.3816e-07;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D157V|421|LOC_Os06g17910|protein_coding|CODING|LOC_Os06g17910.1|3|1) FN2572-S.SNP.6:10398457 chr06:010398457 0 W/10398457-10398457 FN2572-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g17910 NBS-LRR disease resistance protein, putative, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3499-S.SNP.6:10425054 chr06:010425054 0 W/10425054-10425054 FN3499-S SNP G -> T AC=1;AN=188;BQB=0.878931;DP=2695;DP4=1312,1339,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.000294883;MQSB=0.0490763;RPB=0.490983;SGB=25.3545;VDB=0.701235;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E219*|993|LOC_Os06g17930|protein_coding|CODING|LOC_Os06g17930.1|3|1) FN1583-S.SNP.6:10430583 chr06:010430583 0 W/10430583-10430583 FN1583-S Single Base Substitution T-C INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN584-S.SNP.6:10434498 chr06:010434498 0 W/10434498-10434498 FN584-S Single Base Substitution G-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN-353.SNP.6:10435256 chr06:010435256 0 W/10435256-10435256 FN-353 Single Base Substitution C-T INTERGENIC HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. W423-5-1.SNP.6:10443736 chr06:010443736 0 W/10443736-10443736 W423-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2488.SNP.6:10447007 chr06:010447007 0 W/10447007-10447007 FN2488 SNP G -> C AC=1;AN=200;BQB=0.983092;DP=5020;DP4=2230,2489,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8572e-08;MQSB=0.996774;RPB=0.04576;SGB=32.0901;VDB=0.0425722;EFF=INTRON(MODIFIER||||473|LOC_Os06g17970|protein_coding|CODING|LOC_Os06g17970.1|2|1) FN3481-S.SNP.6:10451223 chr06:010451223 0 W/10451223-10451223 FN3481-S SNP T -> A AC=2;AN=184;BQB=0.885041;DP=2408;DP4=1188,1098,15,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.2229e-17;MQSB=0.948531;RPB=0.846629;SGB=99.14;VDB=0.457546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.6:10451712 chr06:010451712 0 W/10451712-10451712 FN2119-S SNP C -> T AC=1;AN=168;BQB=0.0220928;DP=4467;DP4=2148,2262,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.02132e-09;MQSB=0.999612;RPB=0.867613;SGB=-77.4832;VDB=0.391673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.6:10451712 chr06:010451712 0 W/10451712-10451712 FN3521-S SNP C -> T AC=2;AN=188;BQB=0.925819;DP=2821;DP4=1323,1438,4,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.70952e-05;MQSB=0.999578;RPB=0.704849;SGB=35.3493;VDB=0.757595;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.6:10451712 chr06:010451712 0 W/10451712-10451712 FN4113-S SNP C -> T AC=1;AN=182;BQB=0.828753;DP=2910;DP4=1321,1499,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.10095e-10;MQSB=0.995898;RPB=0.561177;SGB=30.6767;VDB=0.205703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.6:10453536 chr06:010453536 0 W/10453536-10453536 FN2711-S SNP G -> C AC=1;AN=200;BQB=0.364476;DP=4948;DP4=2138,2400,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.99364e-08;MQSB=0.904433;RPB=0.992672;SGB=32.0901;VDB=0.098785;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.6:10454085 chr06:010454085 0 W/10454085-10454085 FN-269 Single Base Substitution A-G INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3387-S.SNP.6:10454091 chr06:010454091 0 W/10454091-10454091 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.703601;DP=2366;DP4=1102,1167,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58658e-05;MQSB=0.912419;RPB=0.809726;SGB=10.6662;VDB=0.910125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.6:10458035 chr06:010458035 0 W/10458035-10458035 FN3723-S SNP A -> G AC=1;AN=190;BQB=0.91243;DP=2838;DP4=1444,1266,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.11081e-11;MQSB=0.938106;RPB=0.978008;SGB=71.8647;VDB=0.639126;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.6:10472670 chr06:010472670 0 W/10472670-10472670 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN_552-1-1.SNP.6:10481619 chr06:010481619 0 W/10481619-10481619 FN_552-1-1 Single Base Substitution G-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN-40.SNP.6:10484939 chr06:010484939 0 W/10484939-10484939 FN-40 Single Base Substitution T-A INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN2656-S.SNP.6:10487633 chr06:010487633 0 W/10487633-10487633 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.800267;DP=5039;DP4=2086,2722,19,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.12054e-23;MQSB=0.998859;RPB=0.987275;SGB=137.609;VDB=0.995268;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.6:10535234 chr06:010535234 0 W/10535234-10535234 FN462-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g18090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN622-S.SNP.6:10541188 chr06:010541188 0 W/10541188-10541188 FN622-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3795-S.SNP.6:10550258 chr06:010550258 0 W/10550258-10550258 FN3795-S SNP C -> A AC=1;AN=190;BQB=0.902985;DP=3829;DP4=1638,2082,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=0.00614406;MQSB=1.07424e-08;RPB=0.622537;SGB=62.7569;VDB=0.43549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L121I|173|LOC_Os06g18120|protein_coding|CODING|LOC_Os06g18120.1|1|1) FN2141-S.SNP.6:10552241 chr06:010552241 0 W/10552241-10552241 FN2141-S SNP T -> C AC=1;AN=168;BQB=0.799109;DP=3700;DP4=1768,1893,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.81645e-11;MQSB=0.937858;RPB=0.993393;SGB=41.6313;VDB=0.620534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aga/Gga|R68G|214|LOC_Os06g18130|protein_coding|CODING|LOC_Os06g18130.1|1|1) FN2292.SNP.6:10565146 chr06:010565146 0 W/10565146-10565146 FN2292 SNP C -> T AC=1;AN=192;BQB=0.477319;DP=4746;DP4=2277,2085,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37729e-11;MQSB=0.266586;RPB=0.858069;SGB=41.7357;VDB=0.846183;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.6:10565587 chr06:010565587 0 W/10565587-10565587 FN571-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2446.SNP.6:10566289 chr06:010566289 0 W/10566289-10566289 FN2446 SNP C -> G AC=1;AN=200;BQB=0.947798;DP=4345;DP4=2269,1827,9,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.49583e-06;MQSB=0.0359602;RPB=0.984615;SGB=24.2746;VDB=0.590679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.6:10568393 chr06:010568393 0 W/10568393-10568393 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.996789;DP=3686;DP4=1735,1585,14,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00108519;MQB=2.85142e-14;MQSB=0.938866;RPB=0.884539;SGB=101.266;VDB=0.393848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.6:10587606 chr06:010587606 0 W/10587606-10587606 FN1264-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN673-S.SNP.6:10588247 chr06:010588247 0 W/10588247-10588247 FN673-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN451-S.SNP.6:10591957 chr06:010591957 0 W/10591957-10591957 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN945-S.SNP.6:10592453 chr06:010592453 0 W/10592453-10592453 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN3785-S.SNP.6:10593658 chr06:010593658 0 W/10593658-10593658 FN3785-S SNP C -> T AC=1;AN=190;BQB=0.854;DP=1530;DP4=330,1020,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0156863;MQB=0.00401941;MQSB=0.00871953;RPB=0.682728;SGB=14.7784;VDB=0.103091;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.6:10598087 chr06:010598087 0 W/10598087-10598087 FN3928-S SNP C -> T AC=1;AN=158;BQB=0.565813;DP=2552;DP4=1033,1428,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.72293e-07;MQSB=0.936624;RPB=0.105012;SGB=21.4493;VDB=0.35206;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.6:10598656 chr06:010598656 0 W/10598656-10598656 FN4117-S SNP G -> T AC=1;AN=182;BQB=0.998498;DP=2735;DP4=1481,1153,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.41941e-11;MQSB=0.9811;RPB=0.999279;SGB=49.6712;VDB=0.313294;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.6:10601533 chr06:010601533 0 W/10601533-10601533 FN3627-S SNP G -> C AC=1;AN=190;BQB=0.993804;DP=2684;DP4=1115,1475,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.00743e-06;MQSB=0.989665;RPB=0.172973;SGB=49.0954;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.6:10602566 chr06:010602566 0 W/10602566-10602566 FN3495-S SNP C -> T AC=2;AN=188;BQB=0.640102;DP=2528;DP4=1053,1382,6,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.46601e-13;MQSB=0.989987;RPB=0.775856;SGB=67.8739;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.6:10602735 chr06:010602735 0 W/10602735-10602735 FN1234-S Single Base Substitution G-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1402-S.SNP.6:10603725 chr06:010603725 0 W/10603725-10603725 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2572-S.SNP.6:10604829 chr06:010604829 0 W/10604829-10604829 FN2572-S SNP C -> T AC=2;AN=198;BQB=0.606459;DP=4195;DP4=2065,1855,38,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.95271e-36;MQSB=0.78956;RPB=0.969025;SGB=305.883;VDB=0.542092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.6:10604829 chr06:010604829 0 W/10604829-10604829 FN2572-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN858-S.SNP.6:10605661 chr06:010605661 0 W/10605661-10605661 FN858-S Single Base Substitution A-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2677-S.SNP.6:10608249 chr06:010608249 0 W/10608249-10608249 FN2677-S SNP T -> C AC=1;AN=200;BQB=0.889993;DP=4834;DP4=2231,2354,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80588e-13;MQSB=0.274478;RPB=0.929756;SGB=47.7211;VDB=0.876809;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.6:10610156 chr06:010610156 0 W/10610156-10610156 FN1075-S Single Base Substitution T-A INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3529-S.SNP.6:10612153 chr06:010612153 0 W/10612153-10612153 FN3529-S SNP C -> A AC=1;AN=188;BQB=0.957325;DP=2922;DP4=1347,1485,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00376454;MQB=0.0122433;MQSB=0.864084;RPB=0.292488;SGB=30.8063;VDB=0.263557;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.6:10613504 chr06:010613504 0 W/10613504-10613504 W416-6-1 Single Base Substitution C-A STOP_GAINED HET LOC_Os06g18720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2086-S.SNP.6:10613782 chr06:010613782 0 W/10613782-10613782 FN2086-S SNP C -> T AC=1;AN=168;BQB=0.266393;DP=2797;DP4=1312,1422,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.60283e-10;MQSB=0.994243;RPB=0.907945;SGB=-41.7816;VDB=0.97962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R232Q|345|LOC_Os06g18720|protein_coding|CODING|LOC_Os06g18720.1|2|1) FN2281.SNP.6:10618318 chr06:010618318 0 W/10618318-10618318 FN2281 SNP C -> T AC=1;AN=192;BQB=0.719363;DP=6968;DP4=3363,3081,23,20;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.0984501;MQB=0.327656;MQSB=4.4345e-25;RPB=0.889861;SGB=-94.6495;VDB=0.707383;EFF=INTRON(MODIFIER||||470|LOC_Os06g18730|protein_coding|CODING|LOC_Os06g18730.1|1|1) FN2192-S.SNP.6:10619881 chr06:010619881 0 W/10619881-10619881 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.568602;DP=6233;DP4=2944,2537,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0436387;MQB=0.361663;MQSB=0;RPB=0.206119;SGB=8.77275;VDB=0.954768;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R373|470|LOC_Os06g18730|protein_coding|CODING|LOC_Os06g18730.1|2|1) W470-2-1.SNP.6:10620041 chr06:010620041 0 W/10620041-10620041 W470-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g18730 retrotransposon protein, putative, unclassified SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1338-S.SNP.6:10620240 chr06:010620240 0 W/10620240-10620240 FN1338-S Single Base Substitution C-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2185-S.SNP.6:10621342 chr06:010621342 0 W/10621342-10621342 FN2185-S SNP A -> T AC=1;AN=190;BQB=0.701156;DP=6889;DP4=3477,2679,17,34;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.05937;MQB=0.479928;MQSB=0.00201579;RPB=0.953428;SGB=60.0507;VDB=0.586639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.6:10625428 chr06:010625428 0 W/10625428-10625428 FN1089-S Single Base Substitution C-T INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN438-S.SNP.6:10628973 chr06:010628973 0 W/10628973-10628973 FN438-S Single Base Substitution T-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN_N1-169-1.SNP.6:10629011 chr06:010629011 0 W/10629011-10629011 FN_N1-169-1 Single Base Substitution C-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2192-S.SNP.6:10631448 chr06:010631448 0 W/10631448-10631448 FN2192-S SNP G -> A AC=2;AN=190;BQB=0.900971;DP=4498;DP4=2333,1766,25,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.21528e-21;MQSB=0.900396;RPB=0.962274;SGB=82.3989;VDB=0.0942881;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.6:10631806 chr06:010631806 0 W/10631806-10631806 FN4183-S SNP T -> C AC=1;AN=170;BQB=0.83892;DP=2764;DP4=1331,1350,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.27214e-08;MQSB=0.722042;RPB=0.752839;SGB=74.528;VDB=0.474316;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.6:10633075 chr06:010633075 0 W/10633075-10633075 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN515-S.SNP.6:10639713 chr06:010639713 0 W/10639713-10639713 FN515-S Single Base Substitution T-A INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN3448-S.SNP.6:10641339 chr06:010641339 0 W/10641339-10641339 FN3448-S SNP G -> A AC=2;AN=184;BQB=0.857432;DP=3293;DP4=1531,1682,8,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.04439e-14;MQSB=0.989014;RPB=0.981584;SGB=103.004;VDB=0.92618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T308M|312|LOC_Os06g18770|protein_coding|CODING|LOC_Os06g18770.1|1|1) FN_815-4-1.SNP.6:10644199 chr06:010644199 0 W/10644199-10644199 FN_815-4-1 Single Base Substitution A-T Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN479-S.SNP.6:10648856 chr06:010648856 0 W/10648856-10648856 FN479-S Single Base Substitution C-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2721-S.SNP.6:10648889 chr06:010648889 0 W/10648889-10648889 FN2721-S SNP C -> G AC=2;AN=200;BQB=0.990453;DP=5335;DP4=2072,2849,14,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34561e-19;MQSB=0.844462;RPB=0.691687;SGB=39.9882;VDB=0.508721;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.6:10649153 chr06:010649153 0 W/10649153-10649153 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN1190-S.SNP.6:10650284 chr06:010650284 0 W/10650284-10650284 FN1190-S Single Base Substitution G-A INTRON HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN-409.SNP.6:10661390 chr06:010661390 0 W/10661390-10661390 FN-409 Single Base Substitution A-T INTERGENIC HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN2709-S.SNP.6:10664073 chr06:010664073 0 W/10664073-10664073 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.939174;DP=6510;DP4=4116,2053,11,8;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.119355;MQB=0.325504;MQSB=0;RPB=0.530131;SGB=81.8956;VDB=0.186136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.6:10670143 chr06:010670143 0 W/10670143-10670143 FN2209-S SNP C -> T AC=2;AN=190;BQB=0.99832;DP=5271;DP4=2302,2471,16,21;HOB=0.020831;ICB=0.494793;MQ=17;MQ0F=0.165244;MQB=0.287952;MQSB=0.110229;RPB=0.982051;SGB=38.2964;VDB=0.669219;EFF=INTRON(MODIFIER||||1742|LOC_Os06g18800|protein_coding|CODING|LOC_Os06g18800.1|3|1) FN3562-S.SNP.6:10672833 chr06:010672833 0 W/10672833-10672833 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.732948;DP=5955;DP4=3255,2521,18,8;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.330143;MQB=0.00429156;MQSB=1.65635e-14;RPB=0.923171;SGB=112.585;VDB=0.672366;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.6:10673947 chr06:010673947 0 W/10673947-10673947 FN825-S Single Base Substitution C-T INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3958-S.SNP.6:10677446 chr06:010677446 0 W/10677446-10677446 FN3958-S SNP C -> T AC=1;AN=168;BQB=0.992315;DP=1903;DP4=1153,678,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.82961e-06;MQSB=0.0877255;RPB=0.87718;SGB=34.4498;VDB=0.401367;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.6:10677447 chr06:010677447 0 W/10677447-10677447 FN3958-S SNP G -> T AC=1;AN=168;BQB=0.439463;DP=1912;DP4=1162,674,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.75602e-05;MQSB=0.0832097;RPB=0.7245;SGB=34.4498;VDB=0.245164;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.6:10680127 chr06:010680127 0 W/10680127-10680127 FN1392-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g18810 expressed protein SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN-356.SNP.6:10685970 chr06:010685970 0 W/10685970-10685970 FN-356 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g18820 serine threonine kinase, putative, expressed SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3535-S.SNP.6:10687965 chr06:010687965 0 W/10687965-10687965 FN3535-S SNP T -> C AC=2;AN=188;BQB=0.995262;DP=2600;DP4=1429,1104,10,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28684e-10;MQSB=0.999582;RPB=0.488064;SGB=46.6141;VDB=0.142012;EFF=UTR_3_PRIME(MODIFIER||1358||192|LOC_Os06g18820|protein_coding|CODING|LOC_Os06g18820.2|2|1),INTRON(MODIFIER||||290|LOC_Os06g18820|protein_coding|CODING|LOC_Os06g18820.1|1|1) FN3523-S.SNP.6:10689362 chr06:010689362 0 W/10689362-10689362 FN3523-S SNP T -> G AC=1;AN=188;BQB=0.80919;DP=2761;DP4=1350,1325,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35699e-07;MQSB=0.998689;RPB=0.030287;SGB=35.9843;VDB=0.106715;EFF=SPLICE_SITE_REGION(LOW||||290|LOC_Os06g18820|protein_coding|CODING|LOC_Os06g18820.1|2|1),INTRON(MODIFIER||||290|LOC_Os06g18820|protein_coding|CODING|LOC_Os06g18820.1|2|1) FN-349.SNP.6:10690790 chr06:010690790 0 W/10690790-10690790 FN-349 Single Base Substitution C-A UTR_3_PRIME HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN2638-S.SNP.6:10692089 chr06:010692089 0 W/10692089-10692089 FN2638-S SNP A -> G AC=2;AN=200;BQB=0.997324;DP=5229;DP4=2547,2481,20,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.23432e-28;MQSB=0.817196;RPB=0.9327;SGB=166.451;VDB=0.8085;EFF=INTRON(MODIFIER||||589|LOC_Os06g18830|protein_coding|CODING|LOC_Os06g18830.1|2|1) FN2782-S.SNP.6:10698379 chr06:010698379 0 W/10698379-10698379 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.320494;DP=4356;DP4=2027,1985,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.9788e-05;MQSB=0.918967;RPB=0.994128;SGB=1.37381;VDB=0.427717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.6:10714019 chr06:010714019 0 W/10714019-10714019 FN1565-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN-88.SNP.6:10714253 chr06:010714253 0 W/10714253-10714253 FN-88 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g18850 cadmium tolerance factor, putative, expressed SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN-258.SNP.6:10722305 chr06:010722305 0 W/10722305-10722305 FN-258 Single Base Substitution A-G INTERGENIC HOMO SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1451-S.SNP.6:10730117 chr06:010730117 0 W/10730117-10730117 FN1451-S Single Base Substitution C-A INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN541-S.SNP.6:10749441 chr06:010749441 0 W/10749441-10749441 FN541-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g18920 expressed protein SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN550-S.SNP.6:10750930 chr06:010750930 0 W/10750930-10750930 FN550-S Single Base Substitution C-G INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN3730-S.SNP.6:10757773 chr06:010757773 0 W/10757773-10757773 FN3730-S SNP C -> T AC=1;AN=190;BQB=0.810758;DP=2891;DP4=1263,1495,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.36665e-13;MQSB=0.840413;RPB=0.821408;SGB=71.6393;VDB=0.0329827;EFF=INTRON(MODIFIER||||953|LOC_Os06g18930|protein_coding|CODING|LOC_Os06g18930.1|1|1) FN2390.SNP.6:10761517 chr06:010761517 0 W/10761517-10761517 FN2390 SNP G -> A AC=1;AN=200;BQB=0.74599;DP=4401;DP4=2183,1977,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.47942e-11;MQSB=0.871316;RPB=0.997227;SGB=81.8956;VDB=0.38717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.6:10763079 chr06:010763079 0 W/10763079-10763079 FN2626-S SNP C -> T AC=1;AN=200;BQB=0.994156;DP=4895;DP4=2411,2183,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00035421;MQSB=0.537529;RPB=0.890073;SGB=18.639;VDB=0.702288;EFF=INTERGENIC(MODIFIER||||||||||1) FN1001-S.SNP.6:10772157 chr06:010772157 0 W/10772157-10772157 FN1001-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g18950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1097-S.SNP.6:10772157 chr06:010772157 0 W/10772157-10772157 FN1097-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g18950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN628-S.SNP.6:10772157 chr06:010772157 0 W/10772157-10772157 FN628-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g18950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN552-S.SNP.6:10774758 chr06:010774758 0 W/10774758-10774758 FN552-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g18950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2177-S.SNP.6:10775255 chr06:010775255 0 W/10775255-10775255 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.269044;DP=3895;DP4=2001,1847,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00487805;MQB=6.01673e-13;MQSB=0.414105;RPB=0.450615;SGB=-77.4832;VDB=0.267224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.6:10779016 chr06:010779016 0 W/10779016-10779016 FN2625-S SNP A -> G AC=2;AN=200;BQB=0.398151;DP=4457;DP4=2473,1555,30,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.77516e-22;MQSB=0.978972;RPB=0.997411;SGB=187.814;VDB=0.550801;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.6:10781352 chr06:010781352 0 W/10781352-10781352 FN985-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g18960 embryogenesis transmembrane protein, putative, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3790-S.SNP.6:10787475 chr06:010787475 0 W/10787475-10787475 FN3790-S SNP T -> A AC=1;AN=190;BQB=0.932338;DP=2407;DP4=1073,1239,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.23942e-07;MQSB=0.000298753;RPB=0.826408;SGB=36.1006;VDB=0.436745;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.6:10791241 chr06:010791241 0 W/10791241-10791241 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.992801;DP=1750;DP4=904,793,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000345309;MQSB=0.926959;RPB=0.389997;SGB=30.1021;VDB=0.0285058;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.6:10794688 chr06:010794688 0 W/10794688-10794688 FN695-S Single Base Substitution C-T INTRON HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2495.SNP.6:10795367 chr06:010795367 0 W/10795367-10795367 FN2495 SNP T -> C AC=1;AN=200;BQB=0.711048;DP=4543;DP4=2191,2060,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000269122;MQSB=0.824953;RPB=0.960575;SGB=31.2392;VDB=0.814588;EFF=INTRON(MODIFIER||||664|LOC_Os06g18970|protein_coding|CODING|LOC_Os06g18970.1|5|1) FN1692-S.SNP.6:10796976 chr06:010796976 0 W/10796976-10796976 FN1692-S SNP C -> G AC=1;AN=188;BQB=0.0144451;DP=3534;DP4=1802,1695,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.24344e-05;MQSB=0.959737;RPB=0.510871;SGB=-83.9838;VDB=0.361609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E66Q|664|LOC_Os06g18970|protein_coding|CODING|LOC_Os06g18970.1|2|1) FN2593-S.SNP.6:10806146 chr06:010806146 0 W/10806146-10806146 FN2593-S SNP T -> A AC=1;AN=198;BQB=0.974281;DP=3460;DP4=1958,1162,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.34816e-13;MQSB=0.0163226;RPB=0.385436;SGB=25.3006;VDB=0.690526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.6:10810645 chr06:010810645 0 W/10810645-10810645 FN2594-S SNP A -> G AC=1;AN=198;BQB=0.567771;DP=4180;DP4=1997,1766,11,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239234;MQB=6.84687e-16;MQSB=0.872727;RPB=0.781819;SGB=-112.274;VDB=0.802583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.6:10820222 chr06:010820222 0 W/10820222-10820222 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.719909;DP=4375;DP4=2057,2115,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67171e-10;MQSB=0.751886;RPB=0.981357;SGB=68.0801;VDB=0.626131;EFF=INTERGENIC(MODIFIER||||||||||1) 705-1.SNP.6:10820617 chr06:010820617 0 W/10820617-10820617 705-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. FN1272-S.SNP.6:10822071 chr06:010822071 0 W/10822071-10822071 FN1272-S Single Base Substitution G-A INTRON HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN-272.SNP.6:10824270 chr06:010824270 0 W/10824270-10824270 FN-272 Single Base Substitution A-T INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN566-S.SNP.6:10830504 chr06:010830504 0 W/10830504-10830504 FN566-S Single Base Substitution T-A INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2673-S.SNP.6:10831119 chr06:010831119 0 W/10831119-10831119 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.922778;DP=4255;DP4=2008,1862,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000470035;MQB=2.3615e-09;MQSB=0.902164;RPB=0.973011;SGB=51.0851;VDB=0.368413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.6:10851188 chr06:010851188 0 W/10851188-10851188 FN2128-S SNP C -> T AC=1;AN=168;BQB=0.17781;DP=3702;DP4=1934,1722,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.78562e-10;MQSB=0.990889;RPB=0.658949;SGB=-69.6373;VDB=0.414899;EFF=INTRON(MODIFIER||||971|LOC_Os06g19080|protein_coding|CODING|LOC_Os06g19080.1|1|1) FN347-S.SNP.6:10852504 chr06:010852504 0 W/10852504-10852504 FN347-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3713-S.SNP.6:10857259 chr06:010857259 0 W/10857259-10857259 FN3713-S SNP A -> G AC=1;AN=190;BQB=0.926635;DP=3013;DP4=1522,1322,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00265516;MQB=3.27808e-11;MQSB=0.113637;RPB=0.911614;SGB=99.1879;VDB=0.863474;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.6:10859252 chr06:010859252 0 W/10859252-10859252 FN-159 Single Base Substitution G-A INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2235-S.SNP.6:10863310 chr06:010863310 0 W/10863310-10863310 FN2235-S SNP T -> C AC=1;AN=190;BQB=0.436144;DP=4528;DP4=2354,1803,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.11116e-08;MQSB=0.893008;RPB=0.699739;SGB=36.4291;VDB=0.745241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.6:10865750 chr06:010865750 0 W/10865750-10865750 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.252974;DP=5020;DP4=2262,2436,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.59919e-16;MQSB=0.96571;RPB=0.926818;SGB=-82.011;VDB=0.948689;EFF=INTRON(MODIFIER||||117|LOC_Os06g19095|protein_coding|CODING|LOC_Os06g19095.1|1|1) FN854-S.SNP.6:10865819 chr06:010865819 0 W/10865819-10865819 FN854-S Single Base Substitution T-A INTRON HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2165-S.SNP.6:10867379 chr06:010867379 0 W/10867379-10867379 FN2165-S SNP C -> A AC=1;AN=168;BQB=0.458389;DP=3112;DP4=1369,1690,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.40607e-07;MQSB=0.869625;RPB=0.130024;SGB=27.0464;VDB=0.24284;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S67|117|LOC_Os06g19095|protein_coding|CODING|LOC_Os06g19095.1|1|1) FN2677-S.SNP.6:10875450 chr06:010875450 0 W/10875450-10875450 FN2677-S SNP G -> T AC=1;AN=200;BQB=0.770844;DP=5341;DP4=2582,2519,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.02943e-10;MQSB=0.88894;RPB=0.959513;SGB=58.2954;VDB=0.768776;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.6:10875920 chr06:010875920 0 W/10875920-10875920 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.126821;DP=5204;DP4=2515,2398,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.2174e-11;MQSB=0.826538;RPB=0.550043;SGB=72.6852;VDB=0.278652;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.6:10888275 chr06:010888275 0 W/10888275-10888275 FN-113 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g19130 cadmium tolerance factor, putative, expressed SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN1635-S.SNP.6:10891740 chr06:010891740 0 W/10891740-10891740 FN1635-S SNP C -> T AC=1;AN=188;BQB=9.32359e-11;DP=2789;DP4=1994,725,29,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000358551;MQB=0.0776879;MQSB=0.254508;RPB=0.0173574;SGB=-575.458;VDB=0.186489;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.6:10891808 chr06:010891808 0 W/10891808-10891808 FN480-S Single Base Substitution A-T INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN854-S.SNP.6:10891931 chr06:010891931 0 W/10891931-10891931 FN854-S Single Base Substitution G-C INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN1061-S.SNP.6:10897789 chr06:010897789 0 W/10897789-10897789 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1039-S.SNP.6:10903194 chr06:010903194 0 W/10903194-10903194 FN1039-S Single Base Substitution C-T INTRON HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN3484-S.SNP.6:10904279 chr06:010904279 0 W/10904279-10904279 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.984894;DP=2717;DP4=1489,1097,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.29831e-06;MQSB=0.913052;RPB=0.987943;SGB=21.6609;VDB=0.998611;EFF=INTRON(MODIFIER||||894|LOC_Os06g19160|protein_coding|CODING|LOC_Os06g19160.1|3|1) FN2398.SNP.6:10907339 chr06:010907339 0 W/10907339-10907339 FN2398 SNP A -> G AC=1;AN=200;BQB=0.160607;DP=4716;DP4=2524,1954,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.5258e-06;MQSB=0.969824;RPB=0.557563;SGB=35.8441;VDB=0.633718;EFF=INTRON(MODIFIER||||894|LOC_Os06g19160|protein_coding|CODING|LOC_Os06g19160.1|2|1) FN1458-S.SNP.6:10914047 chr06:010914047 0 W/10914047-10914047 FN1458-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2169-S.SNP.6:10916658 chr06:010916658 0 W/10916658-10916658 FN2169-S SNP A -> T AC=2;AN=168;BQB=0.99998;DP=2563;DP4=1713,803,20,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.61161e-13;MQSB=0.992338;RPB=0.991994;SGB=-151.471;VDB=0.255592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.6:10916855 chr06:010916855 0 W/10916855-10916855 FN2180-S SNP G -> A AC=1;AN=190;BQB=0.905108;DP=4789;DP4=2192,2292,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61284e-11;MQSB=0.58549;RPB=0.817897;SGB=53.8699;VDB=0.705559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.6:10921592 chr06:010921592 0 W/10921592-10921592 FN2302 SNP C -> G AC=1;AN=192;BQB=0.872105;DP=4819;DP4=2321,2208,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17368e-11;MQSB=0.953178;RPB=0.970882;SGB=113.111;VDB=0.687804;EFF=INTERGENIC(MODIFIER||||||||||1) FN-47.SNP.6:10925516 chr06:010925516 0 W/10925516-10925516 FN-47 Single Base Substitution G-A INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN2445.SNP.6:10929481 chr06:010929481 0 W/10929481-10929481 FN2445 SNP C -> A AC=1;AN=200;BQB=0.937768;DP=4622;DP4=2259,2115,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.85596e-12;MQSB=0.999945;RPB=0.713784;SGB=11.0951;VDB=0.250734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.6:10942126 chr06:010942126 0 W/10942126-10942126 FN3390-S SNP C -> A AC=1;AN=184;BQB=0.972967;DP=2897;DP4=1514,1302,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.071108;MQB=0.692733;MQSB=0.000385416;RPB=0.942992;SGB=25.1826;VDB=0.127533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D183Y|915|LOC_Os06g19230|protein_coding|CODING|LOC_Os06g19230.1|1|1) FN2289.SNP.6:10942308 chr06:010942308 0 W/10942308-10942308 FN2289 SNP T -> C AC=1;AN=192;BQB=0.931986;DP=4857;DP4=2294,2224,8,19;HOB=5.42535e-05;ICB=0.000109072;MQ=22;MQ0F=0.181388;MQB=0.659255;MQSB=0;RPB=0.986722;SGB=-8.56084;VDB=0.938369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D122G|915|LOC_Os06g19230|protein_coding|CODING|LOC_Os06g19230.1|1|1) FN919-S.SNP.6:10946066 chr06:010946066 0 W/10946066-10946066 FN919-S Single Base Substitution A-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN4110-S.SNP.6:10947539 chr06:010947539 0 W/10947539-10947539 FN4110-S SNP T -> G AC=2;AN=182;BQB=0.750477;DP=3159;DP4=1543,1500,15,29;HOB=0.0217365;ICB=0.494567;MQ=23;MQ0F=0.216841;MQB=0.226727;MQSB=0;RPB=0.999832;SGB=95.959;VDB=0.438955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aGg|M287R|1524|LOC_Os06g19240|protein_coding|CODING|LOC_Os06g19240.1|1|1) FN3382-S.SNP.6:10956685 chr06:010956685 0 W/10956685-10956685 FN3382-S SNP A -> T AC=1;AN=184;BQB=0.672843;DP=3528;DP4=1697,1651,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.73452e-09;MQSB=0.996527;RPB=0.76808;SGB=9.8459;VDB=0.615287;EFF=INTRON(MODIFIER||||223|LOC_Os06g19250|protein_coding|CODING|LOC_Os06g19250.1|2|1) FN-120.SNP.6:10966584 chr06:010966584 0 W/10966584-10966584 FN-120 Single Base Substitution G-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN477-S.SNP.6:10972061 chr06:010972061 0 W/10972061-10972061 FN477-S Single Base Substitution T-A INTRON HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1731-S.SNP.6:10973086 chr06:010973086 0 W/10973086-10973086 FN1731-S SNP T -> C AC=1;AN=188;BQB=0.903294;DP=1811;DP4=876,883,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00060747;MQSB=0.954838;RPB=0.992576;SGB=8.27326;VDB=0.0738748;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H1176|1255|LOC_Os06g19279|protein_coding|CODING|LOC_Os06g19279.1|2|1) FN2618-S.SNP.6:10983374 chr06:010983374 0 W/10983374-10983374 FN2618-S SNP A -> G AC=1;AN=198;BQB=0.461229;DP=4251;DP4=1964,2057,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00399906;MQB=0.00070759;MQSB=0.153172;RPB=0.424614;SGB=47.3393;VDB=0.819915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.6:10984956 chr06:010984956 0 W/10984956-10984956 FN2398 SNP T -> C AC=1;AN=200;BQB=0.64888;DP=4463;DP4=2704,1453,8,8;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0499664;MQB=0.938967;MQSB=9.01864e-18;RPB=0.938655;SGB=26.8797;VDB=0.571004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.6:10986750 chr06:010986750 0 W/10986750-10986750 FN2329 SNP A -> G AC=2;AN=192;BQB=0.760451;DP=4713;DP4=2278,1972,21,13;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.267558;MQB=0.172648;MQSB=0;RPB=0.976368;SGB=33.9487;VDB=0.693543;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.6:10990860 chr06:010990860 0 W/10990860-10990860 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.594243;DP=3488;DP4=1819,1560,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0639335;MQB=0.708924;MQSB=4.18051e-18;RPB=0.988931;SGB=62.3078;VDB=0.692017;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F307|527|LOC_Os06g19330|protein_coding|CODING|LOC_Os06g19330.1|2|1) FN2213-S.SNP.6:10993962 chr06:010993962 0 W/10993962-10993962 FN2213-S SNP C -> T AC=1;AN=190;BQB=0.999781;DP=2872;DP4=1104,1512,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.198816;MQB=0.591485;MQSB=0.000272065;RPB=0.916232;SGB=112.85;VDB=0.358336;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.6:11005384 chr06:011005384 0 W/11005384-11005384 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN738-S.SNP.6:11005410 chr06:011005410 0 W/11005410-11005410 FN738-S Single Base Substitution C-G INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2450.SNP.6:11008621 chr06:011008621 0 W/11008621-11008621 FN2450 SNP T -> A AC=2;AN=200;BQB=0.641654;DP=4661;DP4=2296,1999,21,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.314e-19;MQSB=0.953922;RPB=0.846577;SGB=119.583;VDB=0.522112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y785N|1293|LOC_Os06g19350|protein_coding|CODING|LOC_Os06g19350.1|4|1) FN428-S.SNP.6:11008668 chr06:011008668 0 W/11008668-11008668 FN428-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1499-S.SNP.6:11009341 chr06:011009341 0 W/11009341-11009341 FN1499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g19350 retrotransposon, putative, centromere-specific, expressed SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2719-S.SNP.6:11010698 chr06:011010698 0 W/11010698-11010698 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.00752299;DP=4479;DP4=2093,1910,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09143e-07;MQSB=0.720958;RPB=0.344131;SGB=-196.891;VDB=0.892585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gCa|V1169A|1293|LOC_Os06g19350|protein_coding|CODING|LOC_Os06g19350.1|6|1) FN1015-S.SNP.6:11024271 chr06:011024271 0 W/11024271-11024271 FN1015-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g19370 cadmium tolerance factor, putative, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1015-S.SNP.6:11024272 chr06:011024272 0 W/11024272-11024272 FN1015-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g19370 cadmium tolerance factor, putative, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1030-S.SNP.6:11031001 chr06:011031001 0 W/11031001-11031001 FN1030-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2412.SNP.6:11031128 chr06:011031128 0 W/11031128-11031128 FN2412 SNP A -> T AC=2;AN=200;BQB=0.966491;DP=4858;DP4=2389,2155,28,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.48536e-21;MQSB=0.982705;RPB=0.99736;SGB=48.014;VDB=0.631563;EFF=UTR_3_PRIME(MODIFIER||1099||151|LOC_Os06g19380|protein_coding|CODING|LOC_Os06g19380.1|3|1) FN2531-S.SNP.6:11035476 chr06:011035476 0 W/11035476-11035476 FN2531-S SNP A -> G AC=1;AN=198;BQB=0.979638;DP=4336;DP4=1841,2199,4,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.70205e-10;MQSB=0.985152;RPB=0.847409;SGB=54.5295;VDB=0.873595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.6:11037100 chr06:011037100 0 W/11037100-11037100 FN2280-S SNP C -> T AC=1;AN=190;BQB=0.977568;DP=4671;DP4=2574,1749,22,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30061e-13;MQSB=0.0453132;RPB=0.847745;SGB=-7.68321;VDB=0.866876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.6:11038907 chr06:011038907 0 W/11038907-11038907 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.978667;DP=2961;DP4=1304,1567,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.68228e-09;MQSB=0.917452;RPB=0.905986;SGB=66.8296;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.6:11042753 chr06:011042753 0 W/11042753-11042753 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.961431;DP=4924;DP4=2410,2258,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.73942e-12;MQSB=0.9017;RPB=0.945812;SGB=104.921;VDB=0.221688;EFF=INTRON(MODIFIER||||648|LOC_Os06g19390|protein_coding|CODING|LOC_Os06g19390.1|1|1) FN2689-S.SNP.6:11043341 chr06:011043341 0 W/11043341-11043341 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.288899;DP=4853;DP4=2567,2042,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93361e-07;MQSB=0.954993;RPB=0.915559;SGB=13.8539;VDB=0.131446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.6:11046324 chr06:011046324 0 W/11046324-11046324 FN2224-S SNP C -> T AC=2;AN=190;BQB=0.869657;DP=4498;DP4=2002,1862,35,27;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.76066e-25;MQSB=0.0606363;RPB=0.414911;SGB=58.0565;VDB=0.176071;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.6:11046324 chr06:011046324 0 W/11046324-11046324 FN2471 SNP C -> T AC=2;AN=200;BQB=0.898824;DP=4412;DP4=2022,1807,26,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2543e-23;MQSB=0.000617151;RPB=0.929342;SGB=-48.3449;VDB=0.039344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.6:11046324 chr06:011046324 0 W/11046324-11046324 FN3457-S SNP C -> T AC=2;AN=184;BQB=0.778598;DP=2892;DP4=1379,1366,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.76056e-09;MQSB=0.981488;RPB=0.976611;SGB=67.4439;VDB=0.00790687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.6:11046324 chr06:011046324 0 W/11046324-11046324 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.920179;DP=2952;DP4=1367,1441,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43972e-06;MQSB=0.398582;RPB=0.121877;SGB=32.5467;VDB=0.0475124;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.6:11052200 chr06:011052200 0 W/11052200-11052200 FN587-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN-122.SNP.6:11052261 chr06:011052261 0 W/11052261-11052261 FN-122 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g19400 GRAM and C2 domains containing protein, putative, expressed SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN590-S.SNP.6:11059913 chr06:011059913 0 W/11059913-11059913 FN590-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g19410 retrotransposon protein, putative, unclassified, expressed SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1006-S.SNP.6:11062897 chr06:011062897 0 W/11062897-11062897 FN1006-S Single Base Substitution A-T INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN230-S.SNP.6:11062962 chr06:011062962 0 W/11062962-11062962 FN230-S Single Base Substitution T-A INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2661-S.SNP.6:11065532 chr06:011065532 0 W/11065532-11065532 FN2661-S SNP T -> C AC=1;AN=200;BQB=0.981343;DP=4564;DP4=2348,1934,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.23548e-08;MQSB=0.999771;RPB=0.968597;SGB=26.8797;VDB=0.134516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.6:11065887 chr06:011065887 0 W/11065887-11065887 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.910746;DP=3858;DP4=2117,1516,23,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68921e-13;MQSB=0.534385;RPB=0.564315;SGB=68.5625;VDB=0.813656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.6:11067735 chr06:011067735 0 W/11067735-11067735 FN3563-S SNP C -> T AC=2;AN=188;BQB=0.290318;DP=2870;DP4=1280,1481,24,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.14277e-18;MQSB=0.903718;RPB=0.200833;SGB=162.37;VDB=0.441903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.6:11069218 chr06:011069218 0 W/11069218-11069218 FN1086-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g19430 expressed protein SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4208-S.SNP.6:11071952 chr06:011071952 0 W/11071952-11071952 FN4208-S SNP T -> C AC=1;AN=170;BQB=0.970914;DP=2756;DP4=1375,1304,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.20635e-10;MQSB=0.627948;RPB=0.558401;SGB=65.6427;VDB=0.489158;EFF=INTRON(MODIFIER||||407|LOC_Os06g19444|protein_coding|CODING|LOC_Os06g19444.2|3|1),INTRON(MODIFIER||||408|LOC_Os06g19444|protein_coding|CODING|LOC_Os06g19444.1|3|1) FN1176-S.SNP.6:11078223 chr06:011078223 0 W/11078223-11078223 FN1176-S Single Base Substitution C-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN756-S.SNP.6:11079846 chr06:011079846 0 W/11079846-11079846 FN756-S Single Base Substitution A-C INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN3398-S.SNP.6:11079933 chr06:011079933 0 W/11079933-11079933 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.562314;DP=2915;DP4=1484,1345,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.20252e-06;MQSB=0.992872;RPB=0.998542;SGB=2.23696;VDB=0.408117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.6:11081380 chr06:011081380 0 W/11081380-11081380 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1409-S.SNP.6:11084304 chr06:011084304 0 W/11084304-11084304 FN1409-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1548-S.SNP.6:11084304 chr06:011084304 0 W/11084304-11084304 FN1548-S SNP G -> A AC=1;AN=188;BQB=0.112638;DP=2653;DP4=1092,1521,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000404557;MQSB=0.967774;RPB=0.73165;SGB=-34.6243;VDB=0.5863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.6:11084304 chr06:011084304 0 W/11084304-11084304 FN2474 SNP G -> A AC=2;AN=200;BQB=0.891227;DP=4518;DP4=1980,2183,20,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.93257e-22;MQSB=0.994816;RPB=0.596518;SGB=44.8037;VDB=0.617679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.6:11095888 chr06:011095888 0 W/11095888-11095888 FN2442 SNP T -> G AC=1;AN=200;BQB=0.891112;DP=4998;DP4=2222,2420,3,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.04551e-05;MQSB=0.0765439;RPB=0.574012;SGB=36.6644;VDB=0.118793;EFF=INTRON(MODIFIER||||201|LOC_Os06g19480|protein_coding|CODING|LOC_Os06g19480.1|3|1) FN1028-S.SNP.6:11099089 chr06:011099089 0 W/11099089-11099089 FN1028-S Single Base Substitution C-G INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-353.SNP.6:11100379 chr06:011100379 0 W/11100379-11100379 FN-353 Single Base Substitution A-T INTERGENIC HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN_N1-119-1.SNP.6:11102745 chr06:011102745 0 W/11102745-11102745 FN_N1-119-1 Single Base Substitution A-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN598-S.SNP.6:11103255 chr06:011103255 0 W/11103255-11103255 FN598-S Single Base Substitution C-T INTRON HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2162-S.SNP.6:11103263 chr06:011103263 0 W/11103263-11103263 FN2162-S SNP G -> T AC=1;AN=168;BQB=0.61677;DP=2578;DP4=1213,1273,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.90382e-09;MQSB=0.99658;RPB=0.288488;SGB=12.7756;VDB=0.754652;EFF=INTRON(MODIFIER||||328|LOC_Os06g19500|protein_coding|CODING|LOC_Os06g19500.1|4|1) FN3679-S.SNP.6:11107823 chr06:011107823 0 W/11107823-11107823 FN3679-S SNP T -> C AC=1;AN=190;BQB=0.948923;DP=2812;DP4=1308,1378,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44437e-10;MQSB=0.91656;RPB=0.97904;SGB=76.4186;VDB=0.816459;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.6:11120048 chr06:011120048 0 W/11120048-11120048 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN728-S.SNP.6:11120049 chr06:011120049 0 W/11120049-11120049 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN3448-S.SNP.6:11125225 chr06:011125225 0 W/11125225-11125225 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.997259;DP=3121;DP4=1492,1550,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.85459e-09;MQSB=0.95589;RPB=0.192075;SGB=66.8296;VDB=0.624414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.6:11135114 chr06:011135114 0 W/11135114-11135114 FN-336 Single Base Substitution A-C INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN-74.SNP.6:11136604 chr06:011136604 0 W/11136604-11136604 FN-74 Single Base Substitution T-G INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3437-S.SNP.6:11142859 chr06:011142859 0 W/11142859-11142859 FN3437-S SNP A -> G AC=1;AN=184;BQB=0.984816;DP=2742;DP4=1426,1230,1,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52154e-05;MQSB=0.999634;RPB=0.896103;SGB=30.6558;VDB=0.308129;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.6:11144550 chr06:011144550 0 W/11144550-11144550 FN4077-S SNP G -> T AC=1;AN=182;BQB=0.883617;DP=2154;DP4=662,1394,3,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.74574e-07;MQSB=0.0198082;RPB=0.890044;SGB=48.6223;VDB=0.0787609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W213C|327|LOC_Os06g19570|protein_coding|CODING|LOC_Os06g19570.1|3|1) W706-3-1.SNP.6:11145573 chr06:011145573 0 W/11145573-11145573 W706-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2500.SNP.6:11151693 chr06:011151693 0 W/11151693-11151693 FN2500 SNP G -> A AC=1;AN=200;BQB=0.378609;DP=4904;DP4=2337,2296,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00203915;MQB=3.59691e-06;MQSB=0.087367;RPB=0.793864;SGB=1.46408;VDB=0.0358497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.6:11162251 chr06:011162251 0 W/11162251-11162251 FN3485-S SNP G -> A AC=1;AN=184;BQB=0.914793;DP=2659;DP4=1136,1467,3,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5331e-07;MQSB=0.998921;RPB=0.967449;SGB=62.3078;VDB=0.572958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.6:11164027 chr06:011164027 0 W/11164027-11164027 FN3364-S SNP C -> T AC=2;AN=184;BQB=0.999193;DP=2428;DP4=1067,1262,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.87539e-10;MQSB=0.943673;RPB=0.785839;SGB=62.3078;VDB=0.327568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.6:11168773 chr06:011168773 0 W/11168773-11168773 FN1431-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN745-S.SNP.6:11176571 chr06:011176571 0 W/11176571-11176571 FN745-S Single Base Substitution C-G INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2656-S.SNP.6:11184329 chr06:011184329 0 W/11184329-11184329 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.117671;DP=4619;DP4=2091,2197,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40185e-15;MQSB=0.631166;RPB=0.961232;SGB=83.5316;VDB=0.666544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.6:11187834 chr06:011187834 0 W/11187834-11187834 FN2446 SNP C -> T AC=1;AN=200;BQB=0.956831;DP=4700;DP4=2377,2005,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52227e-17;MQSB=0.828733;RPB=0.996994;SGB=30.3571;VDB=0.984694;EFF=INTRON(MODIFIER||||228|LOC_Os06g19620|protein_coding|CODING|LOC_Os06g19620.1|2|1),INTRON(MODIFIER||||162|LOC_Os06g19620|protein_coding|CODING|LOC_Os06g19620.2|2|1) FN1027-S.SNP.6:11189841 chr06:011189841 0 W/11189841-11189841 FN1027-S Single Base Substitution C-G INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. W23-2-1.SNP.6:11191559 chr06:011191559 0 W/11191559-11191559 W23-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN3058-S.SNP.6:11195517 chr06:011195517 0 W/11195517-11195517 FN3058-S SNP C -> T AC=2;AN=184;BQB=0.888782;DP=2755;DP4=1316,1277,24,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.95359e-20;MQSB=0.670496;RPB=0.761587;SGB=41.8035;VDB=0.220649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.6:11197781 chr06:011197781 0 W/11197781-11197781 FN2663-S SNP T -> A AC=1;AN=200;BQB=0.96736;DP=4296;DP4=1722,2184,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232775;MQB=2.07065e-12;MQSB=0.422381;RPB=0.969737;SGB=15.9106;VDB=0.422935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.6:11197782 chr06:011197782 0 W/11197782-11197782 FN2663-S SNP A -> T AC=1;AN=200;BQB=0.986602;DP=4305;DP4=1754,2214,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232288;MQB=3.64347e-12;MQSB=0.508656;RPB=0.896986;SGB=42.5108;VDB=0.581891;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.6:11201064 chr06:011201064 0 W/11201064-11201064 FN4112-S SNP G -> T AC=1;AN=182;BQB=0.418352;DP=2946;DP4=1313,1553,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0822e-07;MQSB=0.990913;RPB=0.547672;SGB=84.7091;VDB=0.895614;EFF=INTRON(MODIFIER||||477|LOC_Os06g19630|protein_coding|CODING|LOC_Os06g19630.1|7|1),INTRON(MODIFIER||||589|LOC_Os06g19630|protein_coding|CODING|LOC_Os06g19630.2|8|1) FN809-S.SNP.6:11204210 chr06:011204210 0 W/11204210-11204210 FN809-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN964-S.SNP.6:11215866 chr06:011215866 0 W/11215866-11215866 FN964-S Single Base Substitution C-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN485-S.SNP.6:11226185 chr06:011226185 0 W/11226185-11226185 FN485-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g19660 WD domain, G-beta repeat domain containing protein, expressed SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1233-S.SNP.6:11228675 chr06:011228675 0 W/11228675-11228675 FN1233-S Single Base Substitution T-C INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1631-S.SNP.6:11230724 chr06:011230724 0 W/11230724-11230724 FN1631-S Single Base Substitution T-C INTRON Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2440.SNP.6:11232197 chr06:011232197 0 W/11232197-11232197 FN2440 SNP G -> T AC=1;AN=200;BQB=0.753612;DP=3902;DP4=1815,1899,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56405e-08;MQSB=0.110158;RPB=0.56539;SGB=43.8747;VDB=0.48571;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S115|480|LOC_Os06g19670|protein_coding|CODING|LOC_Os06g19670.1|2|1) FN-288.SNP.6:11236786 chr06:011236786 0 W/11236786-11236786 FN-288 Single Base Substitution A-T INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN3439-S.SNP.6:11241736 chr06:011241736 0 W/11241736-11241736 FN3439-S SNP C -> T AC=2;AN=184;BQB=0.509523;DP=2956;DP4=1510,1294,20,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.78875e-14;MQSB=0.81014;RPB=0.737143;SGB=58.5801;VDB=0.242364;EFF=INTRON(MODIFIER||||500|LOC_Os06g19680|protein_coding|CODING|LOC_Os06g19680.1|2|1),INTRON(MODIFIER||||498|LOC_Os06g19680|protein_coding|CODING|LOC_Os06g19680.2|2|1) FN1252-S.SNP.6:11249126 chr06:011249126 0 W/11249126-11249126 FN1252-S Single Base Substitution T-C INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1461-S.SNP.6:11249377 chr06:011249377 0 W/11249377-11249377 FN1461-S Single Base Substitution C-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-305.SNP.6:11256057 chr06:011256057 0 W/11256057-11256057 FN-305 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g19710 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1340-S.SNP.6:11260293 chr06:011260293 0 W/11260293-11260293 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN2452.SNP.6:11273106 chr06:011273106 0 W/11273106-11273106 FN2452 SNP T -> G AC=2;AN=200;BQB=0.639044;DP=4792;DP4=2224,2181,24,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.61855e-21;MQSB=0.96097;RPB=0.885292;SGB=197.025;VDB=0.956268;EFF=INTRON(MODIFIER||||1801|LOC_Os06g19730|protein_coding|CODING|LOC_Os06g19730.1|21|1) FN3794-S.SNP.6:11277418 chr06:011277418 0 W/11277418-11277418 FN3794-S SNP A -> C AC=1;AN=190;BQB=0.969492;DP=2457;DP4=1168,1226,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12291e-07;MQSB=0.998947;RPB=0.81755;SGB=44.5415;VDB=0.677213;EFF=INTRON(MODIFIER||||1801|LOC_Os06g19730|protein_coding|CODING|LOC_Os06g19730.1|27|1) FN2141-S.SNP.6:11278754 chr06:011278754 0 W/11278754-11278754 FN2141-S SNP A -> T AC=1;AN=168;BQB=0.622068;DP=4273;DP4=2245,1965,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.94329e-06;MQSB=0.994645;RPB=0.934628;SGB=-103.201;VDB=0.479418;EFF=INTRON(MODIFIER||||1801|LOC_Os06g19730|protein_coding|CODING|LOC_Os06g19730.1|29|1) FN2698-S.SNP.6:11280955 chr06:011280955 0 W/11280955-11280955 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.881275;DP=5105;DP4=2517,2290,19,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000195886;MQB=2.03793e-24;MQSB=0.723572;RPB=0.592135;SGB=43.1985;VDB=0.964847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G1719S|1801|LOC_Os06g19730|protein_coding|CODING|LOC_Os06g19730.1|33|1) FN-110.SNP.6:11282523 chr06:011282523 0 W/11282523-11282523 FN-110 Single Base Substitution T-C INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3581-S.SNP.6:11291188 chr06:011291188 0 W/11291188-11291188 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.971546;DP=3160;DP4=1544,1496,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.55152e-08;MQSB=0.99874;RPB=0.376449;SGB=49.0954;VDB=0.235908;EFF=INTRON(MODIFIER||||500|LOC_Os06g19740|protein_coding|CODING|LOC_Os06g19740.1|2|1) FN1266-S.SNP.6:11296652 chr06:011296652 0 W/11296652-11296652 FN1266-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3503-S.SNP.6:11298089 chr06:011298089 0 W/11298089-11298089 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.928827;DP=3530;DP4=1923,1529,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000566572;MQB=0.023301;MQSB=0.917017;RPB=0.971182;SGB=30.8063;VDB=0.585032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.6:11300970 chr06:011300970 0 W/11300970-11300970 FN1038-S Single Base Substitution G-A INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1038-S.SNP.6:11300971 chr06:011300971 0 W/11300971-11300971 FN1038-S Single Base Substitution T-A INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1038-S.SNP.6:11301954 chr06:011301954 0 W/11301954-11301954 FN1038-S Single Base Substitution A-G INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN3376-S.SNP.6:11319208 chr06:011319208 0 W/11319208-11319208 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.999408;DP=2602;DP4=1670,765,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00038432;MQB=3.53458e-05;MQSB=0.00549066;RPB=0.926204;SGB=48.7425;VDB=0.758664;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.6:11320121 chr06:011320121 0 W/11320121-11320121 FN-278 Single Base Substitution C-T INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN597-S.SNP.6:11322172 chr06:011322172 0 W/11322172-11322172 FN597-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g19820 fringe-related protein, putative, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN509-S.SNP.6:11323855 chr06:011323855 0 W/11323855-11323855 FN509-S Single Base Substitution T-A INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN-187.SNP.6:11324359 chr06:011324359 0 W/11324359-11324359 FN-187 Single Base Substitution G-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3345-S.SNP.6:11326738 chr06:011326738 0 W/11326738-11326738 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.982073;DP=3141;DP4=1335,1721,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.09577e-11;MQSB=0.840893;RPB=0.894967;SGB=60.4004;VDB=0.752673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E113K|459|LOC_Os06g19830|protein_coding|CODING|LOC_Os06g19830.1|3|1) FN2219-S.SNP.6:11327662 chr06:011327662 0 W/11327662-11327662 FN2219-S SNP G -> T AC=1;AN=190;BQB=0.7868;DP=5098;DP4=2351,2535,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00274618;MQB=1.49281e-06;MQSB=0.21117;RPB=0.999278;SGB=44.5415;VDB=0.439026;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E421*|459|LOC_Os06g19830|protein_coding|CODING|LOC_Os06g19830.1|3|1) FN3757-S.SNP.6:11343152 chr06:011343152 0 W/11343152-11343152 FN3757-S SNP A -> T AC=1;AN=190;BQB=0.7852;DP=2342;DP4=891,1347,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7827e-08;MQSB=0.331742;RPB=0.900905;SGB=53.6492;VDB=0.178826;EFF=INTRON(MODIFIER||||1224|LOC_Os06g19854|protein_coding|CODING|LOC_Os06g19854.1|3|1) FN3757-S.SNP.6:11343153 chr06:011343153 0 W/11343153-11343153 FN3757-S SNP A -> T AC=1;AN=190;BQB=0.439322;DP=2338;DP4=883,1309,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.56497e-11;MQSB=0.341784;RPB=0.922393;SGB=50.3161;VDB=0.354135;EFF=INTRON(MODIFIER||||1224|LOC_Os06g19854|protein_coding|CODING|LOC_Os06g19854.1|3|1) FN850-S.SNP.6:11345236 chr06:011345236 0 W/11345236-11345236 FN850-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g19854 retrotransposon protein, putative, unclassified, expressed SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN678-S.SNP.6:11346435 chr06:011346435 0 W/11346435-11346435 FN678-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g19854 retrotransposon protein, putative, unclassified, expressed SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN-407.SNP.6:11350818 chr06:011350818 0 W/11350818-11350818 FN-407 Single Base Substitution C-T INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1065-S.SNP.6:11350818 chr06:011350818 0 W/11350818-11350818 FN1065-S Single Base Substitution C-T INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2499.SNP.6:11350818 chr06:011350818 0 W/11350818-11350818 FN2499 SNP C -> T AC=2;AN=200;BQB=0.724426;DP=4156;DP4=2194,1719,18,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.08169e-20;MQSB=0.995209;RPB=0.943386;SGB=71.1676;VDB=0.475361;EFF=INTERGENIC(MODIFIER||||||||||1) FN407-S.SNP.6:11350818 chr06:011350818 0 W/11350818-11350818 FN407-S Single Base Substitution C-T INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN3416-S.SNP.6:11354830 chr06:011354830 0 W/11354830-11354830 FN3416-S SNP C -> A AC=1;AN=184;BQB=0.254474;DP=2927;DP4=1470,1393,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000341647;MQB=0.00196944;MQSB=0.740039;RPB=0.860181;SGB=18.1394;VDB=0.841906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.6:11360176 chr06:011360176 0 W/11360176-11360176 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.802039;DP=4370;DP4=2182,2014,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42644e-08;MQSB=0.983395;RPB=0.54374;SGB=63.3342;VDB=0.621909;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.6:11367176 chr06:011367176 0 W/11367176-11367176 FN1697-S SNP G -> C AC=1;AN=186;BQB=0.321615;DP=946;DP4=766,123,13,1;HOB=5.78101e-05;ICB=0.000116242;MQ=26;MQ0F=0.105708;MQB=0.753214;MQSB=5.76637e-20;RPB=0.940895;SGB=0.85892;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.6:11367176 chr06:011367176 0 W/11367176-11367176 FN2274-S SNP G -> C AC=2;AN=190;BQB=0.362675;DP=2018;DP4=1091,719,23,11;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.024777;MQB=0.0255581;MQSB=3.73691e-09;RPB=0.840793;SGB=101.369;VDB=0.586785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.6:11367176 chr06:011367176 0 W/11367176-11367176 FN2707-S SNP G -> C AC=1;AN=200;BQB=0.0568662;DP=3796;DP4=1656,1849,4,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0144889;MQB=0.00524537;MQSB=3.88121e-14;RPB=0.549055;SGB=13.8539;VDB=0.0881721;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.6:11367176 chr06:011367176 0 W/11367176-11367176 FN3416-S SNP G -> C AC=2;AN=184;BQB=0.999686;DP=1818;DP4=627,1120,4,10;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.00770077;MQB=0.00217222;MQSB=3.23244e-06;RPB=0.420631;SGB=57.786;VDB=0.433274;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.6:11367176 chr06:011367176 0 W/11367176-11367176 FN4125-S SNP G -> C AC=1;AN=182;BQB=0.960465;DP=1561;DP4=508,1001,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.016656;MQB=0.0840717;MQSB=2.54813e-07;RPB=0.969904;SGB=30.5793;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.6:11370439 chr06:011370439 0 W/11370439-11370439 FN2650-S SNP C -> A AC=1;AN=200;BQB=0.99067;DP=4629;DP4=2183,2164,7,6;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.180601;MQB=0.401411;MQSB=2.07841e-41;RPB=0.626102;SGB=54.2646;VDB=0.574591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G434C|1055|LOC_Os06g19890|protein_coding|CODING|LOC_Os06g19890.1|2|1) FN3280-S.SNP.6:11370762 chr06:011370762 0 W/11370762-11370762 FN3280-S SNP G -> A AC=2;AN=184;BQB=0.955444;DP=3200;DP4=1521,1563,14,14;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0.108438;MQB=0.82627;MQSB=1.71928e-06;RPB=0.943548;SGB=121.091;VDB=0.514298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P326L|1055|LOC_Os06g19890|protein_coding|CODING|LOC_Os06g19890.1|2|1) FN420-S.SNP.6:11374338 chr06:011374338 0 W/11374338-11374338 FN420-S Single Base Substitution A-T INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN3490-S.SNP.6:11374790 chr06:011374790 0 W/11374790-11374790 FN3490-S SNP T -> A AC=1;AN=184;BQB=0.496702;DP=2294;DP4=1200,1001,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000108888;MQSB=0.886429;RPB=0.940532;SGB=48.7425;VDB=0.0301687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.6:11378516 chr06:011378516 0 W/11378516-11378516 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.996054;DP=2959;DP4=1403,1448,5,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.15647e-11;MQSB=0.634134;RPB=0.99743;SGB=84.9167;VDB=0.374309;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.6:11383072 chr06:011383072 0 W/11383072-11383072 FN433-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g19900 retrotransposon protein, putative, unclassified, expressed SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN1458-S.SNP.6:11383675 chr06:011383675 0 W/11383675-11383675 FN1458-S Single Base Substitution T-A INTRON HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1186-S.SNP.6:11383798 chr06:011383798 0 W/11383798-11383798 FN1186-S Single Base Substitution G-A STOP_GAINED HET LOC_Os06g19900 retrotransposon protein, putative, unclassified, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN3987-S.SNP.6:11385674 chr06:011385674 0 W/11385674-11385674 FN3987-S SNP G -> C AC=1;AN=168;BQB=0.951914;DP=3133;DP4=1743,1293,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.58647e-18;MQSB=0.995542;RPB=0.814003;SGB=131.927;VDB=0.322354;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N531K|1289|LOC_Os06g19900|protein_coding|CODING|LOC_Os06g19900.1|6|1) FN2750-S.SNP.6:11387212 chr06:011387212 0 W/11387212-11387212 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.325663;DP=4743;DP4=2268,2260,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.9782e-13;MQSB=0.962793;RPB=0.465791;SGB=76.3213;VDB=0.45384;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q214*|1289|LOC_Os06g19900|protein_coding|CODING|LOC_Os06g19900.1|2|1);LOF=(LOC_Os06g19900|LOC_Os06g19900|1|1.00);NMD=(LOC_Os06g19900|LOC_Os06g19900|1|1.00) FN3371-S.SNP.6:11392980 chr06:011392980 0 W/11392980-11392980 FN3371-S SNP C -> A AC=1;AN=184;BQB=0.963063;DP=3646;DP4=1672,1902,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19668e-05;MQSB=0.999707;RPB=0.10863;SGB=39.699;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.6:11398885 chr06:011398885 0 W/11398885-11398885 FN718-S Single Base Substitution T-C INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2104-S.SNP.6:11404224 chr06:011404224 0 W/11404224-11404224 FN2104-S SNP A -> G AC=1;AN=168;BQB=0.00985065;DP=3340;DP4=1616,1660,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000299401;MQB=0.00989559;MQSB=0.00290402;RPB=0.972723;SGB=-55.5147;VDB=0.265732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.6:11408356 chr06:011408356 0 W/11408356-11408356 FN1764-S SNP G -> C AC=1;AN=188;BQB=0.237386;DP=3258;DP4=1868,1323,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000613874;MQB=0.00220345;MQSB=0.00344239;RPB=0.852884;SGB=2.45162;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.6:11413363 chr06:011413363 0 W/11413363-11413363 FN624-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g19930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN3443-S.SNP.6:11413671 chr06:011413671 0 W/11413671-11413671 FN3443-S SNP T -> A AC=1;AN=184;BQB=0.85755;DP=3270;DP4=1556,1546,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0259939;MQB=0.352983;MQSB=0.0389622;RPB=0.341406;SGB=57.786;VDB=0.251287;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G934|1472|LOC_Os06g19930|protein_coding|CODING|LOC_Os06g19930.1|1|1) FN3482-S.SNP.6:11418104 chr06:011418104 0 W/11418104-11418104 FN3482-S SNP G -> T AC=2;AN=184;BQB=0.816922;DP=2910;DP4=1239,1548,16,15;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0333333;MQB=0.672648;MQSB=7.76543e-11;RPB=0.974104;SGB=134.656;VDB=0.431014;EFF=INTRON(MODIFIER||||399|LOC_Os06g19940|protein_coding|CODING|LOC_Os06g19940.1|3|1) FN1355-S.SNP.6:11427970 chr06:011427970 0 W/11427970-11427970 FN1355-S Single Base Substitution T-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2558-S.SNP.6:11430786 chr06:011430786 0 W/11430786-11430786 FN2558-S SNP G -> C AC=1;AN=198;BQB=0.997946;DP=4272;DP4=2261,1756,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00601e-06;MQSB=0.885644;RPB=0.783446;SGB=32.9588;VDB=0.907447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.6:11440144 chr06:011440144 0 W/11440144-11440144 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.400167;DP=2994;DP4=1576,1322,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.7585e-07;MQSB=0.994813;RPB=0.798589;SGB=15.7097;VDB=0.961343;EFF=INTRON(MODIFIER||||696|LOC_Os06g19960|protein_coding|CODING|LOC_Os06g19960.1|1|1) FN3355-S.SNP.6:11440145 chr06:011440145 0 W/11440145-11440145 FN3355-S SNP A -> G AC=1;AN=184;BQB=0.677049;DP=3002;DP4=1582,1336,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58663e-07;MQSB=0.98489;RPB=0.962501;SGB=13.188;VDB=0.950175;EFF=INTRON(MODIFIER||||696|LOC_Os06g19960|protein_coding|CODING|LOC_Os06g19960.1|1|1) FN818-S.SNP.6:11442028 chr06:011442028 0 W/11442028-11442028 FN818-S Single Base Substitution G-A INTRON HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN621-S.SNP.6:11450109 chr06:011450109 0 W/11450109-11450109 FN621-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2457.SNP.6:11454825 chr06:011454825 0 W/11454825-11454825 FN2457 SNP A -> G AC=1;AN=200;BQB=0.74754;DP=4668;DP4=2092,2217,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.33294e-15;MQSB=0.999997;RPB=0.175422;SGB=58.1418;VDB=0.269474;EFF=INTRON(MODIFIER||||639|LOC_Os06g19980|protein_coding|CODING|LOC_Os06g19980.1|1|1) FN3528-S.SNP.6:11460097 chr06:011460097 0 W/11460097-11460097 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.755441;DP=2516;DP4=1231,1193,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.25866e-06;MQSB=0.967345;RPB=0.622888;SGB=35.9843;VDB=0.539469;EFF=INTRON(MODIFIER||||639|LOC_Os06g19980|protein_coding|CODING|LOC_Os06g19980.1|9|1) FN1619-S.SNP.6:11469000 chr06:011469000 0 W/11469000-11469000 FN1619-S Single Base Substitution C-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2293.SNP.6:11471268 chr06:011471268 0 W/11471268-11471268 FN2293 SNP C -> T AC=1;AN=192;BQB=0.980601;DP=5078;DP4=2820,1973,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.55716e-06;MQSB=0.974478;RPB=0.958319;SGB=32.6514;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.6:11477729 chr06:011477729 0 W/11477729-11477729 FN1108-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g20020 ZOS6-03 - C2H2 zinc finger protein, expressed SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN-362.SNP.6:11478896 chr06:011478896 0 W/11478896-11478896 FN-362 Single Base Substitution G-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1624-S.SNP.6:11481745 chr06:011481745 0 W/11481745-11481745 FN1624-S Single Base Substitution C-T INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2187-S.SNP.6:11486254 chr06:011486254 0 W/11486254-11486254 FN2187-S SNP A -> G AC=2;AN=190;BQB=0.887278;DP=5183;DP4=2554,2239,25,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.89269e-24;MQSB=0.999769;RPB=0.946205;SGB=102.83;VDB=0.71101;EFF=UTR_3_PRIME(MODIFIER||1675||348|LOC_Os06g20030|protein_coding|CODING|LOC_Os06g20030.1|4|1) FN-184.SNP.6:11497492 chr06:011497492 0 W/11497492-11497492 FN-184 Single Base Substitution A-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN448-S.SNP.6:11497493 chr06:011497493 0 W/11497493-11497493 FN448-S Single Base Substitution T-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2412.SNP.6:11497607 chr06:011497607 0 W/11497607-11497607 FN2412 SNP T -> C AC=2;AN=200;BQB=0.921653;DP=4847;DP4=2545,2034,28,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.31152e-25;MQSB=0.723539;RPB=0.9146;SGB=206.235;VDB=0.549301;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.6:11507766 chr06:011507766 0 W/11507766-11507766 FN924-S Single Base Substitution G-A INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN774-S.SNP.6:11510344 chr06:011510344 0 W/11510344-11510344 FN774-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1707-S.SNP.6:11510531 chr06:011510531 0 W/11510531-11510531 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.347526;DP=1452;DP4=718,668,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000145616;MQSB=0.30569;RPB=0.700083;SGB=26.2637;VDB=0.76204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A168T|248|LOC_Os06g20070|protein_coding|CODING|LOC_Os06g20070.1|2|1) FN3566-S.SNP.6:11511637 chr06:011511637 0 W/11511637-11511637 FN3566-S SNP G -> A AC=2;AN=188;BQB=0.889415;DP=1377;DP4=2,1329,0,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.29487e-13;MQSB=0.945226;RPB=0.827099;SGB=90.1727;VDB=0.33003;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.6:11512513 chr06:011512513 0 W/11512513-11512513 W385-6-8-4 Single Base Substitution G-C INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3865-S.SNP.6:11514941 chr06:011514941 0 W/11514941-11514941 FN3865-S SNP A -> T AC=2;AN=158;BQB=0.975829;DP=2291;DP4=1077,1098,16,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.68969e-15;MQSB=0.837949;RPB=0.868819;SGB=94.7235;VDB=0.124093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.6:11525042 chr06:011525042 0 W/11525042-11525042 FN3386-S SNP C -> T AC=2;AN=184;BQB=0.788769;DP=2786;DP4=1294,1396,6,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.54994e-11;MQSB=0.988809;RPB=0.980804;SGB=28.3187;VDB=0.766477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T1420I|1475|LOC_Os06g20090|protein_coding|CODING|LOC_Os06g20090.1|12|1) FN1585-S.SNP.6:11532965 chr06:011532965 0 W/11532965-11532965 FN1585-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g20110 expressed protein SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3851-S.SNP.6:11553499 chr06:011553499 0 W/11553499-11553499 FN3851-S SNP A -> T AC=1;AN=158;BQB=0.479943;DP=2647;DP4=1367,1194,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.5546e-09;MQSB=0.998757;RPB=0.970063;SGB=82.0227;VDB=0.942291;EFF=INTRON(MODIFIER||||486|LOC_Os06g20140|protein_coding|CODING|LOC_Os06g20140.1|1|1) FN3343-S.SNP.6:11553591 chr06:011553591 0 W/11553591-11553591 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.992106;DP=2845;DP4=1525,1225,4,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.37013e-10;MQSB=0.89479;RPB=0.968288;SGB=75.8731;VDB=0.873966;EFF=INTRON(MODIFIER||||486|LOC_Os06g20140|protein_coding|CODING|LOC_Os06g20140.1|1|1) FN2333.SNP.6:11554860 chr06:011554860 0 W/11554860-11554860 FN2333 SNP C -> T AC=1;AN=192;BQB=0.296931;DP=4629;DP4=2201,2066,18,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.9635e-13;MQSB=0.644026;RPB=0.85495;SGB=-39.2487;VDB=0.971098;EFF=INTRON(MODIFIER||||486|LOC_Os06g20140|protein_coding|CODING|LOC_Os06g20140.1|1|1) FN2434.SNP.6:11557668 chr06:011557668 0 W/11557668-11557668 FN2434 SNP G -> A AC=1;AN=200;BQB=0.992884;DP=4640;DP4=2054,2303,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12127e-05;MQSB=0.991226;RPB=0.926792;SGB=16.4591;VDB=0.717018;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.6:11565940 chr06:011565940 0 W/11565940-11565940 FN705-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g20160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN705-S.SNP.6:11565941 chr06:011565941 0 W/11565941-11565941 FN705-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g20160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN4150-S.SNP.6:11566260 chr06:011566260 0 W/11566260-11566260 FN4150-S SNP C -> A AC=1;AN=170;BQB=0.901714;DP=2587;DP4=1165,1336,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0614612;MQB=0.0100942;MQSB=6.86372e-05;RPB=0.993228;SGB=61.2001;VDB=0.223769;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R841|1024|LOC_Os06g20160|protein_coding|CODING|LOC_Os06g20160.1|3|1) FN4150-S.SNP.6:11566262 chr06:011566262 0 W/11566262-11566262 FN4150-S SNP T -> A AC=1;AN=170;BQB=0.988178;DP=2600;DP4=1151,1316,13,4;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0588462;MQB=0.0176651;MQSB=2.12123e-05;RPB=0.992297;SGB=27.2119;VDB=0.483597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L842H|1024|LOC_Os06g20160|protein_coding|CODING|LOC_Os06g20160.1|3|1) FN530-S.SNP.6:11569199 chr06:011569199 0 W/11569199-11569199 FN530-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN477-S.SNP.6:11571504 chr06:011571504 0 W/11571504-11571504 FN477-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g20170 retrotransposon protein, putative, unclassified, expressed SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3825-S.SNP.6:11577715 chr06:011577715 0 W/11577715-11577715 FN3825-S SNP T -> G AC=2;AN=190;BQB=0.921588;DP=2844;DP4=1384,1322,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.0265e-12;MQSB=0.963102;RPB=0.369909;SGB=64.5316;VDB=0.354386;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.6:11580668 chr06:011580668 0 W/11580668-11580668 FN1916 Single Base Substitution C-T HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN4153-S.SNP.6:11585359 chr06:011585359 0 W/11585359-11585359 FN4153-S SNP G -> A AC=1;AN=170;BQB=0.998399;DP=2474;DP4=1309,1090,12,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.26368e-10;MQSB=0.993276;RPB=0.978776;SGB=74.528;VDB=0.932919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.6:11591121 chr06:011591121 0 W/11591121-11591121 FN2471 SNP T -> C AC=1;AN=200;BQB=0.710907;DP=2744;DP4=580,1917,2,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20452e-08;MQSB=0.0022683;RPB=0.758446;SGB=51.0851;VDB=0.922119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3581-S.SNP.6:11592335 chr06:011592335 0 W/11592335-11592335 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.88371;DP=3427;DP4=1687,1588,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00817041;MQB=0.127963;MQSB=0.0138979;RPB=0.144758;SGB=44.5415;VDB=0.830722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.6:11597491 chr06:011597491 0 W/11597491-11597491 FN3810-S SNP A -> G AC=2;AN=190;BQB=0.949149;DP=2990;DP4=1384,1486,13,11;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0993311;MQB=0.234415;MQSB=0.902914;RPB=0.811142;SGB=75.1932;VDB=0.968669;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R928|1732|LOC_Os06g20210|protein_coding|CODING|LOC_Os06g20210.1|3|1) FN897-S.SNP.6:11598457 chr06:011598457 0 W/11598457-11598457 FN897-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g20210 transposon protein, putative, unclassified, expressed SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2685-S.SNP.6:11600107 chr06:011600107 0 W/11600107-11600107 FN2685-S SNP A -> T AC=2;AN=200;BQB=0.784732;DP=5090;DP4=2678,2138,23,19;HOB=0.0198;ICB=0.495051;MQ=21;MQ0F=0.174263;MQB=0.98736;MQSB=0;RPB=0.425312;SGB=48.014;VDB=0.46705;EFF=INTRON(MODIFIER||||1732|LOC_Os06g20210|protein_coding|CODING|LOC_Os06g20210.1|9|1) FN922-S.SNP.6:11600305 chr06:011600305 0 W/11600305-11600305 FN922-S Single Base Substitution G-A INTRON HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3777-S.SNP.6:11604823 chr06:011604823 0 W/11604823-11604823 FN3777-S SNP C -> T AC=1;AN=188;BQB=0.98994;DP=2712;DP4=1314,1314,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77064e-08;MQSB=0.991181;RPB=0.543304;SGB=36.1006;VDB=0.832238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.6:11604858 chr06:011604858 0 W/11604858-11604858 FN2473 SNP A -> G AC=1;AN=200;BQB=0.87643;DP=4979;DP4=2548,2139,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.5298e-06;MQSB=0.980828;RPB=0.865961;SGB=35.8441;VDB=0.333347;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.6:11607181 chr06:011607181 0 W/11607181-11607181 FN689-S Single Base Substitution C-T INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN455-S.SNP.6:11608234 chr06:011608234 0 W/11608234-11608234 FN455-S Single Base Substitution T-G INTERGENIC HOMO SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1543-S.SNP.6:11623313 chr06:011623313 0 W/11623313-11623313 FN1543-S Single Base Substitution C-A INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN3950-S.SNP.6:11625936 chr06:011625936 0 W/11625936-11625936 FN3950-S SNP C -> A AC=1;AN=168;BQB=0.978613;DP=2616;DP4=1389,1119,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.69531e-07;MQSB=0.988605;RPB=0.959112;SGB=12.4615;VDB=0.990866;EFF=INTRON(MODIFIER||||113|LOC_Os06g20260|protein_coding|CODING|LOC_Os06g20260.1|1|1) FN555-S.SNP.6:11626704 chr06:011626704 0 W/11626704-11626704 FN555-S Single Base Substitution C-T INTRON HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN824-S.SNP.6:11627639 chr06:011627639 0 W/11627639-11627639 FN824-S Single Base Substitution A-T INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2114-S.SNP.6:11632183 chr06:011632183 0 W/11632183-11632183 FN2114-S SNP C -> A AC=2;AN=168;BQB=0.78701;DP=3360;DP4=1685,1573,18,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.77198e-16;MQSB=0.999447;RPB=0.806277;SGB=-49.7502;VDB=0.608051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.6:11643008 chr06:011643008 0 W/11643008-11643008 FN2583-S SNP C -> A AC=1;AN=200;BQB=0.973075;DP=4638;DP4=2316,2013,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.53664e-13;MQSB=0.978095;RPB=0.959004;SGB=76.3213;VDB=0.447308;EFF=INTRON(MODIFIER||||584|LOC_Os06g20280|protein_coding|CODING|LOC_Os06g20280.1|1|1) FN978-S.SNP.6:11646889 chr06:011646889 0 W/11646889-11646889 FN978-S Single Base Substitution C-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2664-S.SNP.6:11648174 chr06:011648174 0 W/11648174-11648174 FN2664-S SNP T -> A AC=1;AN=200;BQB=0.993864;DP=4570;DP4=2007,2222,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218818;MQB=2.12194e-19;MQSB=0.947368;RPB=0.996721;SGB=-5.24302;VDB=0.991694;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.6:11648892 chr06:011648892 0 W/11648892-11648892 FN984-S Single Base Substitution C-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3064-S.SNP.6:11649966 chr06:011649966 0 W/11649966-11649966 FN3064-S SNP T -> C AC=2;AN=184;BQB=0.26092;DP=1386;DP4=498,802,6,13;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.8666e-06;MQSB=0.00592078;RPB=0.851101;SGB=33.3622;VDB=0.24464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2257-S.SNP.6:11659515 chr06:011659515 0 W/11659515-11659515 FN2257-S SNP C -> A AC=2;AN=190;BQB=0.713861;DP=4741;DP4=2131,2027,18,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000210926;MQB=1.43887e-19;MQSB=1.21762e-06;RPB=0.760846;SGB=-96.4723;VDB=0.876991;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.6:11671292 chr06:011671292 0 W/11671292-11671292 FN4122-S SNP C -> A AC=2;AN=182;BQB=0.886232;DP=2723;DP4=1387,1242,17,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.49311e-16;MQSB=0.994961;RPB=0.18259;SGB=95.3123;VDB=0.316615;EFF=INTRON(MODIFIER||||595|LOC_Os06g20310|protein_coding|CODING|LOC_Os06g20310.1|2|1),INTRON(MODIFIER||||595|LOC_Os06g20310|protein_coding|CODING|LOC_Os06g20310.2|2|1),INTRON(MODIFIER||||589|LOC_Os06g20310|protein_coding|CODING|LOC_Os06g20310.3|2|1),INTRON(MODIFIER||||534|LOC_Os06g20310|protein_coding|CODING|LOC_Os06g20310.4|2|1) FN2630-S.SNP.6:11674405 chr06:011674405 0 W/11674405-11674405 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.967249;DP=4529;DP4=2228,2039,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02685e-11;MQSB=0.999952;RPB=0.996026;SGB=42.5108;VDB=0.0884969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.6:11686874 chr06:011686874 0 W/11686874-11686874 FN3415-S SNP T -> C AC=2;AN=184;BQB=0.504819;DP=2184;DP4=1119,974,9,6;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.95599e-05;MQSB=0.786818;RPB=0.580589;SGB=62.3078;VDB=0.826048;EFF=INTRON(MODIFIER||||281|LOC_Os06g20340|protein_coding|CODING|LOC_Os06g20340.1|1|1) FN3772-S.SNP.6:11688302 chr06:011688302 0 W/11688302-11688302 FN3772-S SNP T -> A AC=1;AN=190;BQB=0.902026;DP=2488;DP4=1238,1177,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00127455;MQSB=0.214365;RPB=0.441349;SGB=26.3271;VDB=0.11383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.6:11698567 chr06:011698567 0 W/11698567-11698567 FN1279-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g20370 microtubule associated protein, putative, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3613-S.SNP.6:11704478 chr06:011704478 0 W/11704478-11704478 FN3613-S SNP T -> A AC=2;AN=190;BQB=0.962353;DP=2558;DP4=1231,1225,19,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.31861e-22;MQSB=0.910296;RPB=0.906901;SGB=180.22;VDB=0.635041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y230F|259|LOC_Os06g20380|protein_coding|CODING|LOC_Os06g20380.1|2|1) FN2141-S.SNP.6:11716828 chr06:011716828 0 W/11716828-11716828 FN2141-S SNP G -> C AC=1;AN=168;BQB=0.328506;DP=3557;DP4=1927,1587,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.43744e-13;MQSB=0.991882;RPB=0.942277;SGB=-72.7757;VDB=0.396472;EFF=UTR_3_PRIME(MODIFIER||115||488|LOC_Os06g20390|protein_coding|CODING|LOC_Os06g20390.1|7|1) FN1202-S.SNP.6:11727587 chr06:011727587 0 W/11727587-11727587 FN1202-S Single Base Substitution C-T INTRON HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-92.SNP.6:11728248 chr06:011728248 0 W/11728248-11728248 FN-92 Single Base Substitution T-A INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-92.SNP.6:11728249 chr06:011728249 0 W/11728249-11728249 FN-92 Single Base Substitution T-A INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2634-S.SNP.6:11730669 chr06:011730669 0 W/11730669-11730669 FN2634-S SNP A -> T AC=1;AN=200;BQB=0.946635;DP=4940;DP4=2443,2265,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07862e-19;MQSB=0.881461;RPB=0.99065;SGB=71.1676;VDB=0.312449;EFF=INTRON(MODIFIER||||662|LOC_Os06g20410|protein_coding|CODING|LOC_Os06g20410.1|2|1) FN4113-S.SNP.6:11749195 chr06:011749195 0 W/11749195-11749195 FN4113-S SNP T -> C AC=1;AN=182;BQB=0.894503;DP=3270;DP4=1734,1410,12,10;HOB=6.03792e-05;ICB=0.000121422;MQ=16;MQ0F=0.409174;MQB=0.0773724;MQSB=0;RPB=0.895095;SGB=67.2255;VDB=0.969461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V42A|534|LOC_Os06g20460|protein_coding|CODING|LOC_Os06g20460.1|1|1) FN2300.SNP.6:11761882 chr06:011761882 0 W/11761882-11761882 FN2300 SNP T -> C AC=2;AN=192;BQB=0.372141;DP=4477;DP4=2112,1895,23,15;HOB=0.0206163;ICB=0.494846;MQ=25;MQ0F=0.181148;MQB=0.697578;MQSB=0;RPB=0.820003;SGB=-2.35301;VDB=0.880621;EFF=INTRON(MODIFIER||||212|LOC_Os06g20480|protein_coding|CODING|LOC_Os06g20480.1|2|1) FN2611-S.SNP.6:11762509 chr06:011762509 0 W/11762509-11762509 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.951883;DP=4352;DP4=1933,2025,14,11;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.107307;MQB=0.877279;MQSB=0;RPB=0.699167;SGB=20.7261;VDB=0.913185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.6:11774160 chr06:011774160 0 W/11774160-11774160 FN2178-S SNP A -> G AC=1;AN=168;BQB=0.845026;DP=3445;DP4=1528,1859,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.191582;MQB=0.0347439;MQSB=0.63512;RPB=0.574276;SGB=-11.4952;VDB=0.817823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.6:11778274 chr06:011778274 0 W/11778274-11778274 FN3423-S SNP G -> A AC=2;AN=184;BQB=0.979064;DP=2486;DP4=1150,1224,12,11;HOB=0.0215028;ICB=0.494625;MQ=18;MQ0F=0.438858;MQB=0.349835;MQSB=0;RPB=0.537005;SGB=43.4494;VDB=0.345461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.6:11778277 chr06:011778277 0 W/11778277-11778277 FN3423-S SNP C -> A AC=2;AN=184;BQB=0.309703;DP=2498;DP4=1166,1225,14,12;HOB=0.0215028;ICB=0.494625;MQ=17;MQ0F=0.443555;MQB=0.316104;MQSB=0;RPB=0.215702;SGB=-71.0506;VDB=0.748054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.6:11794165 chr06:011794165 0 W/11794165-11794165 FN3521-S SNP T -> A AC=2;AN=188;BQB=0.995769;DP=3087;DP4=1406,1551,11,17;HOB=0.0210502;ICB=0.494738;MQ=28;MQ0F=0.127632;MQB=0.658844;MQSB=0.0277115;RPB=0.992632;SGB=89.1337;VDB=0.369893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.6:11800982 chr06:011800982 0 W/11800982-11800982 FN2541-S SNP A -> G AC=1;AN=198;BQB=0.31343;DP=5694;DP4=2046,3421,7,16;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0342466;MQB=0.45498;MQSB=0;RPB=0.912761;SGB=17.325;VDB=0.498029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.6:11805355 chr06:011805355 0 W/11805355-11805355 FN3920-S SNP C -> T AC=2;AN=158;BQB=0.976631;DP=3066;DP4=1383,1498,22,18;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.85434e-14;MQSB=9.72166e-06;RPB=0.999954;SGB=169.412;VDB=0.778439;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.6:11811723 chr06:011811723 0 W/11811723-11811723 FN267-S Single Base Substitution T-A INTERGENIC HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3627-S.SNP.6:11819195 chr06:011819195 0 W/11819195-11819195 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.450498;DP=2011;DP4=1123,788,14,9;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0402785;MQB=0.479019;MQSB=0.000879586;RPB=0.946951;SGB=99.1879;VDB=0.239427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.6:11819196 chr06:011819196 0 W/11819196-11819196 FN3627-S SNP C -> A AC=2;AN=190;BQB=0.832282;DP=2006;DP4=1129,765,13,8;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0363908;MQB=0.697047;MQSB=0.000147101;RPB=0.852535;SGB=90.0802;VDB=0.234864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.6:11821588 chr06:011821588 0 W/11821588-11821588 FN3404-S SNP C -> T AC=1;AN=184;BQB=0.997829;DP=3662;DP4=2254,1138,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.231841;MQB=0.396873;MQSB=0.000647271;RPB=0.896945;SGB=39.699;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.6:11823894 chr06:011823894 0 W/11823894-11823894 FN2083-S SNP C -> T AC=1;AN=168;BQB=2.12294e-09;DP=3202;DP4=1168,1879,48,37;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000312305;MQB=9.80909e-45;MQSB=0.215301;RPB=1.86875e-28;SGB=-1494.56;VDB=3.24026e-24;EFF=INTERGENIC(MODIFIER||||||||||1) FN1722-S.SNP.6:11825294 chr06:011825294 0 W/11825294-11825294 FN1722-S SNP G -> A AC=2;AN=186;BQB=0.98264;DP=797;DP4=307,450,1,8;HOB=0.0212741;ICB=0.494682;MQ=47;MQ0F=0.00250941;MQB=0.009104;MQSB=0.920464;RPB=0.995235;SGB=21.8113;VDB=0.254481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.6:11825716 chr06:011825716 0 W/11825716-11825716 FN1050-S Single Base Substitution T-C INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1050-S.SNP.6:11825722 chr06:011825722 0 W/11825722-11825722 FN1050-S Single Base Substitution T-G INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN3466-S.SNP.6:11834307 chr06:011834307 0 W/11834307-11834307 FN3466-S SNP C -> T AC=1;AN=184;BQB=0.675784;DP=2930;DP4=1580,1287,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.40718e-08;MQSB=0.915437;RPB=0.992589;SGB=46.3132;VDB=0.965004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.6:11837088 chr06:011837088 0 W/11837088-11837088 FN3490-S SNP G -> C AC=1;AN=184;BQB=0.996039;DP=2441;DP4=1218,1142,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82573e-05;MQSB=0.819157;RPB=0.699414;SGB=30.6558;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.6:11837983 chr06:011837983 0 W/11837983-11837983 FN-403 Single Base Substitution A-G INTRON HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN-199.SNP.6:11838112 chr06:011838112 0 W/11838112-11838112 FN-199 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g20560 transposon protein, putative, CACTA, En/Spm sub-class SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2475.SNP.6:11839082 chr06:011839082 0 W/11839082-11839082 FN2475 SNP T -> C AC=2;AN=200;BQB=0.83825;DP=3469;DP4=1398,1766,13,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.22196e-09;MQSB=0.955141;RPB=0.11451;SGB=37.3004;VDB=0.432065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.6:11841618 chr06:011841618 0 W/11841618-11841618 FN3506-S SNP G -> C AC=1;AN=188;BQB=0.816277;DP=3112;DP4=1553,1494,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.42417e-06;MQSB=0.908939;RPB=0.989113;SGB=28.8977;VDB=0.480376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R192G|526|LOC_Os06g20570|protein_coding|CODING|LOC_Os06g20570.1|6|1) FN494-S.SNP.6:11844796 chr06:011844796 0 W/11844796-11844796 FN494-S Single Base Substitution G-C INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1420-S.SNP.6:11847071 chr06:011847071 0 W/11847071-11847071 FN1420-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1414-S.SNP.6:11850019 chr06:011850019 0 W/11850019-11850019 FN1414-S Single Base Substitution T-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3568-S.SNP.6:11855830 chr06:011855830 0 W/11855830-11855830 FN3568-S SNP C -> A AC=1;AN=188;BQB=0.986979;DP=3408;DP4=1691,1648,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00176056;MQB=1.63977e-12;MQSB=0.760472;RPB=0.971342;SGB=94.4119;VDB=0.970417;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A15S|1524|LOC_Os06g20590|protein_coding|CODING|LOC_Os06g20590.1|1|1) FN3110-S.SNP.6:11857208 chr06:011857208 0 W/11857208-11857208 FN3110-S SNP G -> T AC=1;AN=182;BQB=0.280144;DP=3002;DP4=1531,1391,12,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.46082e-07;MQSB=0.124503;RPB=0.874887;SGB=56.8786;VDB=0.701678;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P40H|287|LOC_Os06g20600|protein_coding|CODING|LOC_Os06g20600.1|1|1) FN458-S.SNP.6:11862499 chr06:011862499 0 W/11862499-11862499 FN458-S Single Base Substitution A-G INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN302-S.SNP.6:11866674 chr06:011866674 0 W/11866674-11866674 FN302-S Single Base Substitution T-C INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN4302-S.SNP.6:11871875 chr06:011871875 0 W/11871875-11871875 FN4302-S SNP G -> A AC=2;AN=170;BQB=0.98318;DP=941;DP4=593,252,7,3;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=0.00019303;MQSB=0.122756;RPB=0.344462;SGB=38.987;VDB=0.600763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.6:11873137 chr06:011873137 0 W/11873137-11873137 FN2478 SNP C -> T AC=1;AN=200;BQB=0.981047;DP=4127;DP4=2231,1728,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.5977e-12;MQSB=0.982016;RPB=0.566357;SGB=37.3004;VDB=0.0235728;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.6:11873596 chr06:011873596 0 W/11873596-11873596 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.878724;DP=2740;DP4=1423,1240,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.47045e-08;MQSB=0.9943;RPB=0.725858;SGB=42.7914;VDB=0.721586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.6:11875452 chr06:011875452 0 W/11875452-11875452 FN3762-S SNP C -> T AC=1;AN=190;BQB=0.692065;DP=2531;DP4=1000,1422,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00790202;MQB=0.709628;MQSB=0.684961;RPB=0.666916;SGB=39.6545;VDB=0.955247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.6:11876427 chr06:011876427 0 W/11876427-11876427 FN1279-S Single Base Substitution C-G INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1557-S.SNP.6:11880098 chr06:011880098 0 W/11880098-11880098 FN1557-S Single Base Substitution A-G INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1506-S.SNP.6:11882240 chr06:011882240 0 W/11882240-11882240 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN732-S.SNP.6:11886027 chr06:011886027 0 W/11886027-11886027 FN732-S Single Base Substitution G-A INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN4150-S.SNP.6:11887287 chr06:011887287 0 W/11887287-11887287 FN4150-S SNP C -> G AC=1;AN=170;BQB=0.754337;DP=2619;DP4=1256,1286,10,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04695e-14;MQSB=0.962801;RPB=0.836047;SGB=69.3045;VDB=0.418237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.6:11887818 chr06:011887818 0 W/11887818-11887818 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.739412;DP=3118;DP4=1218,1862,6,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.51775e-11;MQSB=0.996067;RPB=0.714547;SGB=-11.0644;VDB=0.578044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.6:11892155 chr06:011892155 0 W/11892155-11892155 FN3629-S SNP T -> G AC=1;AN=190;BQB=0.948054;DP=2927;DP4=1445,1309,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21201e-10;MQSB=0.915665;RPB=0.719173;SGB=57.4238;VDB=0.420124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.6:11892550 chr06:011892550 0 W/11892550-11892550 FN2606-S SNP G -> T AC=1;AN=198;BQB=0.674234;DP=3770;DP4=1875,1720,1,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000200552;MQSB=0.938463;RPB=0.272077;SGB=18.5788;VDB=0.279378;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.6:11894333 chr06:011894333 0 W/11894333-11894333 FN-234 Single Base Substitution T-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2240-S.SNP.6:11894982 chr06:011894982 0 W/11894982-11894982 FN2240-S SNP C -> T AC=1;AN=190;BQB=0.829794;DP=3386;DP4=1465,1697,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00443001;MQB=0.0031129;MQSB=3.71951e-07;RPB=0.860404;SGB=62.7569;VDB=0.621909;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.6:11900520 chr06:011900520 0 W/11900520-11900520 FN2691-S SNP A -> G AC=1;AN=200;BQB=0.880756;DP=5279;DP4=2648,2383,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16531e-15;MQSB=0.679235;RPB=0.990429;SGB=55.5366;VDB=0.630269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I707V|823|LOC_Os06g20650|protein_coding|CODING|LOC_Os06g20650.1|7|1) FN912-S.SNP.6:11928419 chr06:011928419 0 W/11928419-11928419 FN912-S Single Base Substitution G-T INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2240-S.SNP.6:11929943 chr06:011929943 0 W/11929943-11929943 FN2240-S SNP A -> T AC=1;AN=190;BQB=7.69656e-05;DP=4101;DP4=1647,1715,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.55854e-08;MQSB=0.970131;RPB=0.704381;SGB=-250.498;VDB=0.799341;EFF=START_LOST(HIGH|MISSENSE|aTg/aAg|M1K|870|LOC_Os06g20710|protein_coding|CODING|LOC_Os06g20710.1|1|1);LOF=(LOC_Os06g20710|LOC_Os06g20710|1|1.00) FN907-S.SNP.6:11937124 chr06:011937124 0 W/11937124-11937124 FN907-S Single Base Substitution T-C INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-303.SNP.6:11938275 chr06:011938275 0 W/11938275-11938275 FN-303 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g20720 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN1695-S.SNP.6:11938735 chr06:011938735 0 W/11938735-11938735 FN1695-S SNP G -> A AC=2;AN=188;BQB=0.0760089;DP=3290;DP4=1651,1595,16,13;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000303951;MQB=5.80584e-10;MQSB=0.0941438;RPB=0.993032;SGB=25.601;VDB=0.973159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D240N|367|LOC_Os06g20720|protein_coding|CODING|LOC_Os06g20720.1|4|1) FN2765-S.SNP.6:11941646 chr06:011941646 0 W/11941646-11941646 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.79697;DP=3458;DP4=1599,1507,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.00549451;MQB=0.0853571;MQSB=3.43192e-11;RPB=0.981414;SGB=58.1246;VDB=0.594882;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D88|599|LOC_Os06g20730|protein_coding|CODING|LOC_Os06g20730.1|1|1) FN1466-S.SNP.6:11942741 chr06:011942741 0 W/11942741-11942741 FN1466-S Single Base Substitution G-A INTRON HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2537-S.SNP.6:11963254 chr06:011963254 0 W/11963254-11963254 FN2537-S SNP G -> C AC=1;AN=198;BQB=0.570256;DP=3972;DP4=1822,1822,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000251762;MQB=0.0141147;MQSB=0.605825;RPB=0.909096;SGB=25.7687;VDB=0.173848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.6:11968567 chr06:011968567 0 W/11968567-11968567 FN3499-S SNP G -> A AC=1;AN=188;BQB=0.454638;DP=2916;DP4=1400,1423,9,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00193291;MQSB=0.970968;RPB=0.958205;SGB=25.3545;VDB=0.285391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.6:11976900 chr06:011976900 0 W/11976900-11976900 FN2735-S SNP T -> C AC=1;AN=200;BQB=0.59829;DP=4669;DP4=2266,2215,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.86233e-15;MQSB=0.995836;RPB=0.990812;SGB=95.7111;VDB=0.369477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.6:11976901 chr06:011976901 0 W/11976901-11976901 FN2735-S SNP A -> T AC=1;AN=200;BQB=0.888208;DP=4653;DP4=2255,2207,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14164e-15;MQSB=0.991062;RPB=0.947685;SGB=72.7161;VDB=0.28667;EFF=INTERGENIC(MODIFIER||||||||||1) FN2735-S.SNP.6:11976902 chr06:011976902 0 W/11976902-11976902 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.780234;DP=4657;DP4=2244,2163,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.28913e-14;MQSB=0.99362;RPB=0.708685;SGB=45.1159;VDB=0.188709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.6:11980950 chr06:011980950 0 W/11980950-11980950 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.474987;DP=4802;DP4=2173,2223,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.39884e-12;MQSB=0.999567;RPB=0.203206;SGB=33.8752;VDB=0.0978725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.6:11982206 chr06:011982206 0 W/11982206-11982206 FN1179-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN2352.SNP.6:11994435 chr06:011994435 0 W/11994435-11994435 FN2352 SNP T -> C AC=1;AN=192;BQB=0.548786;DP=5392;DP4=2396,2626,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.27244e-14;MQSB=0.571351;RPB=0.718168;SGB=26.127;VDB=0.322541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:11994474 chr06:011994474 0 W/11994474-11994474 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.741175;DP=5083;DP4=2545,2288,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73491e-07;MQSB=0.891976;RPB=0.998889;SGB=19.0642;VDB=0.209572;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.6:11995896 chr06:011995896 0 W/11995896-11995896 FN4272-S SNP A -> T AC=2;AN=170;BQB=0.955014;DP=2544;DP4=1282,1168,19,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.63859e-23;MQSB=0.973241;RPB=0.972888;SGB=124.387;VDB=0.46176;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.6:11997641 chr06:011997641 0 W/11997641-11997641 FN-56 Single Base Substitution A-G INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN2195-S.SNP.6:12010283 chr06:012010283 0 W/12010283-12010283 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.763943;DP=5301;DP4=2568,2172,7,20;HOB=5.54017e-05;ICB=0.000111386;MQ=10;MQ0F=0.459536;MQB=0.00800372;MQSB=0;RPB=0.535191;SGB=22.7576;VDB=0.633779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M474T|1110|LOC_Os06g20810|protein_coding|CODING|LOC_Os06g20810.1|1|1) FN3426-S.SNP.6:12012122 chr06:012012122 0 W/12012122-12012122 FN3426-S SNP C -> A AC=1;AN=184;BQB=1;DP=2672;DP4=991,1592,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.209207;MQB=0.148485;MQSB=1.17874e-23;RPB=0.526872;SGB=48.7425;VDB=0.59634;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.6:12013664 chr06:012013664 0 W/12013664-12013664 FN3762-S SNP G -> C AC=1;AN=190;BQB=0.984784;DP=2618;DP4=1276,1241,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.10296e-08;MQSB=0.987901;RPB=0.895366;SGB=39.6545;VDB=0.78588;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.6:12013937 chr06:012013937 0 W/12013937-12013937 FN3746-S SNP A -> T AC=1;AN=190;BQB=0.877215;DP=2429;DP4=974,1204,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14851e-07;MQSB=0.552409;RPB=0.422772;SGB=23.6597;VDB=0.663763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.6:12015253 chr06:012015253 0 W/12015253-12015253 FN2266-S SNP A -> G AC=1;AN=190;BQB=0.235837;DP=4497;DP4=1994,2234,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67882e-06;MQSB=0.666832;RPB=0.811748;SGB=39.9877;VDB=0.405936;EFF=INTRON(MODIFIER||||78|LOC_Os06g20820|protein_coding|CODING|LOC_Os06g20820.1|1|1) FN2740-S.SNP.6:12030120 chr06:012030120 0 W/12030120-12030120 FN2740-S SNP C -> A AC=1;AN=200;BQB=0.878099;DP=4962;DP4=2078,2587,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53376e-07;MQSB=0.990563;RPB=0.606439;SGB=1.46408;VDB=0.741287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.6:12032929 chr06:012032929 0 W/12032929-12032929 FN2183-S SNP A -> T AC=1;AN=190;BQB=0.902939;DP=4536;DP4=2731,1557,23,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.90721e-17;MQSB=0.000148114;RPB=0.879577;SGB=107.178;VDB=0.441928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.6:12034262 chr06:012034262 0 W/12034262-12034262 FN2392 SNP T -> C AC=1;AN=200;BQB=0.781327;DP=4437;DP4=2035,1707,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36775e-11;MQSB=0.961898;RPB=0.552046;SGB=-38.4742;VDB=0.135319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.6:12034262 chr06:012034262 0 W/12034262-12034262 FN3448-S SNP T -> C AC=2;AN=184;BQB=0.969065;DP=2685;DP4=1333,1224,6,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.2586e-10;MQSB=0.950114;RPB=0.602341;SGB=75.8731;VDB=0.49643;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.6:12034450 chr06:012034450 0 W/12034450-12034450 FN1301-S Single Base Substitution T-C INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN962-S.SNP.6:12036566 chr06:012036566 0 W/12036566-12036566 FN962-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g20840 retrotransposon protein, putative, unclassified, expressed SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2765-S.SNP.6:12039239 chr06:012039239 0 W/12039239-12039239 FN2765-S SNP T -> A AC=1;AN=198;BQB=0.999469;DP=4334;DP4=2092,2003,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.36021e-08;MQSB=0.99996;RPB=0.996429;SGB=24.1541;VDB=0.744353;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.6:12050951 chr06:012050951 0 W/12050951-12050951 FN670-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g20860 paramyosin, putative, expressed SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2608-S.SNP.6:12061260 chr06:012061260 0 W/12061260-12061260 FN2608-S SNP T -> C AC=2;AN=198;BQB=0.882707;DP=4435;DP4=2123,2117,14,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000225479;MQB=5.37625e-16;MQSB=0.632884;RPB=0.249745;SGB=113.881;VDB=0.279331;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.6:12079817 chr06:012079817 0 W/12079817-12079817 FN1197-S Single Base Substitution C-T INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3951-S.SNP.6:12087306 chr06:012087306 0 W/12087306-12087306 FN3951-S SNP T -> C AC=1;AN=168;BQB=0.868171;DP=1577;DP4=946,572,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87062e-05;MQSB=0.929309;RPB=0.987622;SGB=24.4556;VDB=0.362972;EFF=INTRON(MODIFIER||||338|LOC_Os06g20920|protein_coding|CODING|LOC_Os06g20920.2|1|1),INTRON(MODIFIER||||369|LOC_Os06g20920|protein_coding|CODING|LOC_Os06g20920.1|1|1) FN2627-S.SNP.6:12087963 chr06:012087963 0 W/12087963-12087963 FN2627-S SNP G -> T AC=1;AN=200;BQB=0.339753;DP=4302;DP4=1748,2292,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023245;MQB=0.00033201;MQSB=0.98955;RPB=0.959279;SGB=-1.74624;VDB=0.406086;EFF=INTRON(MODIFIER||||338|LOC_Os06g20920|protein_coding|CODING|LOC_Os06g20920.2|1|1),INTRON(MODIFIER||||369|LOC_Os06g20920|protein_coding|CODING|LOC_Os06g20920.1|1|1) FN468-S.SNP.6:12101187 chr06:012101187 0 W/12101187-12101187 FN468-S Single Base Substitution A-C INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN571-S.SNP.6:12110400 chr06:012110400 0 W/12110400-12110400 FN571-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN904-S.SNP.6:12115387 chr06:012115387 0 W/12115387-12115387 FN904-S Single Base Substitution G-A INTERGENIC HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN3951-S.SNP.6:12116328 chr06:012116328 0 W/12116328-12116328 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.834368;DP=2615;DP4=1064,1394,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.77035e-07;MQSB=0.78839;RPB=0.426371;SGB=-17.5266;VDB=0.0817429;EFF=INTRON(MODIFIER||||359|LOC_Os06g20960|protein_coding|CODING|LOC_Os06g20960.1|3|1) FN3951-S.SNP.6:12116335 chr06:012116335 0 W/12116335-12116335 FN3951-S SNP A -> T AC=1;AN=168;BQB=0.838673;DP=2626;DP4=1118,1325,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02564e-06;MQSB=0.769523;RPB=0.483034;SGB=14.8923;VDB=0.0327914;EFF=INTRON(MODIFIER||||359|LOC_Os06g20960|protein_coding|CODING|LOC_Os06g20960.1|3|1) FN1338-S.SNP.6:12121321 chr06:012121321 0 W/12121321-12121321 FN1338-S Single Base Substitution C-T INTRON HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3396-S.SNP.6:12124052 chr06:012124052 0 W/12124052-12124052 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.942381;DP=3150;DP4=1674,1368,37,4;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0622222;MQB=5.2055e-17;MQSB=7.02862e-10;RPB=2.98094e-07;SGB=-867.002;VDB=0.0049012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.6:12124055 chr06:012124055 0 W/12124055-12124055 FN3396-S SNP G -> A AC=1;AN=184;BQB=0.995549;DP=3155;DP4=1704,1356,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0652932;MQB=0.0002091;MQSB=1.8357e-10;RPB=0.909102;SGB=62.3078;VDB=0.829097;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.6:12141902 chr06:012141902 0 W/12141902-12141902 FN484-S Single Base Substitution A-T INTRON HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN4161-S.SNP.6:12155048 chr06:012155048 0 W/12155048-12155048 FN4161-S SNP G -> T AC=2;AN=170;BQB=0.986471;DP=3102;DP4=1669,1319,22,14;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.0122502;MQB=7.4761e-07;MQSB=3.04555e-10;RPB=0.84596;SGB=114.059;VDB=0.622149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G158C|643|LOC_Os06g21040|protein_coding|CODING|LOC_Os06g21040.1|2|1) FN431-S.SNP.6:12189195 chr06:012189195 0 W/12189195-12189195 FN431-S Single Base Substitution C-T INTRON HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN1737-S.SNP.6:12189493 chr06:012189493 0 W/12189493-12189493 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.0382022;DP=4017;DP4=2124,1858,5,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.02358e-10;MQSB=0.18243;RPB=0.706313;SGB=-121.349;VDB=0.697089;EFF=UTR_3_PRIME(MODIFIER||2164||136|LOC_Os06g21099|protein_coding|CODING|LOC_Os06g21099.1|6|1) FN1252-S.SNP.6:12192611 chr06:012192611 0 W/12192611-12192611 FN1252-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN-410.SNP.6:12192899 chr06:012192899 0 W/12192899-12192899 FN-410 Single Base Substitution A-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN1379-S.SNP.6:12194303 chr06:012194303 0 W/12194303-12194303 FN1379-S Single Base Substitution G-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1330-S.SNP.6:12200822 chr06:012200822 0 W/12200822-12200822 FN1330-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN4108-S.SNP.6:12202522 chr06:012202522 0 W/12202522-12202522 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.951302;DP=2591;DP4=1210,1311,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.03267e-07;MQSB=0.970934;RPB=0.66883;SGB=44.1115;VDB=0.0647014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.6:12214809 chr06:012214809 0 W/12214809-12214809 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.720624;DP=2664;DP4=1221,1329,14,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.02115e-10;MQSB=0.824835;RPB=0.947598;SGB=71.1374;VDB=0.839361;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.6:12218288 chr06:012218288 0 W/12218288-12218288 FN4123-S SNP C -> G AC=2;AN=182;BQB=0.97295;DP=3110;DP4=1509,1525,10,30;HOB=0.0217365;ICB=0.494567;MQ=44;MQ0F=0.0163987;MQB=1.47525e-07;MQSB=0.16631;RPB=0.929111;SGB=174.926;VDB=0.525548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A676P|1112|LOC_Os06g21150|protein_coding|CODING|LOC_Os06g21150.1|4|1) FN2478.SNP.6:12226975 chr06:012226975 0 W/12226975-12226975 FN2478 SNP G -> C AC=1;AN=200;BQB=0.414849;DP=2613;DP4=668,1623,4,14;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.166475;MQB=0.387149;MQSB=0;RPB=0.673946;SGB=54.6902;VDB=0.0713684;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.6:12229043 chr06:012229043 0 W/12229043-12229043 FN-346 Single Base Substitution G-A INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3845-S.SNP.6:12229829 chr06:012229829 0 W/12229829-12229829 FN3845-S SNP C -> A AC=2;AN=190;BQB=0.83875;DP=3215;DP4=1339,1757,12,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.0098e-18;MQSB=0.988572;RPB=0.86727;SGB=96.5165;VDB=0.892276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.6:12229894 chr06:012229894 0 W/12229894-12229894 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.974276;DP=4777;DP4=2213,2256,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.82105e-14;MQSB=0.999888;RPB=0.999747;SGB=69.1109;VDB=0.91609;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.6:12230462 chr06:012230462 0 W/12230462-12230462 FN2463 SNP T -> G AC=1;AN=200;BQB=0.910401;DP=4170;DP4=2016,1881,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.866e-10;MQSB=0.95705;RPB=0.432481;SGB=47.4799;VDB=0.110651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.6:12239388 chr06:012239388 0 W/12239388-12239388 FN1748-S SNP C -> T AC=1;AN=188;BQB=0.991636;DP=1329;DP4=622,657,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.00225734;MQB=0.826726;MQSB=0.000873919;RPB=0.845106;SGB=26.2637;VDB=0.585123;EFF=INTRON(MODIFIER||||1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|1|1) FN1423-S.SNP.6:12239577 chr06:012239577 0 W/12239577-12239577 FN1423-S Single Base Substitution T-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.6:12239577 chr06:012239577 0 W/12239577-12239577 FN1433-S Single Base Substitution T-A INTRON HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2164-S.SNP.6:12239577 chr06:012239577 0 W/12239577-12239577 FN2164-S SNP T -> A AC=2;AN=168;BQB=0.423661;DP=1695;DP4=938,681,8,9;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0230088;MQB=0.0102545;MQSB=1.15551e-09;RPB=0.614724;SGB=27.0464;VDB=0.078761;EFF=INTRON(MODIFIER||||1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|1|1) FN395-S.SNP.6:12239577 chr06:012239577 0 W/12239577-12239577 FN395-S Single Base Substitution T-A INTRON HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1423-S.SNP.6:12239578 chr06:012239578 0 W/12239578-12239578 FN1423-S Single Base Substitution C-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.6:12239578 chr06:012239578 0 W/12239578-12239578 FN1433-S Single Base Substitution C-A INTRON HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2164-S.SNP.6:12239578 chr06:012239578 0 W/12239578-12239578 FN2164-S SNP C -> A AC=2;AN=168;BQB=0.0982293;DP=1704;DP4=949,698,7,11;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0217136;MQB=0.0230919;MQSB=1.88198e-10;RPB=0.674476;SGB=7.05233;VDB=0.0181379;EFF=INTRON(MODIFIER||||1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|1|1) FN395-S.SNP.6:12239578 chr06:012239578 0 W/12239578-12239578 FN395-S Single Base Substitution C-A INTRON HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2438.SNP.6:12242615 chr06:012242615 0 W/12242615-12242615 FN2438 SNP G -> A AC=2;AN=200;BQB=0.95267;DP=4486;DP4=1953,2211,35,38;HOB=0.0198;ICB=0.495051;MQ=27;MQ0F=0.125056;MQB=2.45441e-05;MQSB=1.17473e-39;RPB=0.585677;SGB=-572.678;VDB=0.467187;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1266T|1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|5|1) FN2597-S.SNP.6:12242615 chr06:012242615 0 W/12242615-12242615 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.821565;DP=4526;DP4=1869,2401,23,41;HOB=5.10152e-05;ICB=0.000102546;MQ=27;MQ0F=0.133451;MQB=5.576e-17;MQSB=2.99343e-24;RPB=0.00031274;SGB=-1563.44;VDB=3.10716e-11;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1266T|1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|5|1) FN909-S.SNP.6:12242615 chr06:012242615 0 W/12242615-12242615 FN909-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g21180 retrotransposon protein, putative, unclassified, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN3421-S.SNP.6:12243697 chr06:012243697 0 W/12243697-12243697 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.53729;DP=3825;DP4=1765,1976,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.065098;MQB=0.869968;MQSB=0.909307;RPB=0.981795;SGB=75.8731;VDB=0.847843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G1601D|1638|LOC_Os06g21180|protein_coding|CODING|LOC_Os06g21180.1|6|1) FN2359.SNP.6:12247027 chr06:012247027 0 W/12247027-12247027 FN2359 SNP G -> A AC=1;AN=192;BQB=0.813742;DP=4993;DP4=2382,2364,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0226317;MQB=0.0473461;MQSB=0.00265896;RPB=0.85555;SGB=21.2209;VDB=0.989537;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P149|954|LOC_Os06g21190|protein_coding|CODING|LOC_Os06g21190.1|1|1) FN2359.SNP.6:12247028 chr06:012247028 0 W/12247028-12247028 FN2359 SNP G -> A AC=1;AN=192;BQB=0.416305;DP=4975;DP4=2309,2320,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0233166;MQB=0.160987;MQSB=0.0029125;RPB=0.880019;SGB=-15.8974;VDB=0.989537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P149L|954|LOC_Os06g21190|protein_coding|CODING|LOC_Os06g21190.1|1|1) FN2333.SNP.6:12251124 chr06:012251124 0 W/12251124-12251124 FN2333 SNP G -> A AC=1;AN=192;BQB=0.396283;DP=5257;DP4=2541,2426,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000190223;MQB=0.000744513;MQSB=0.586451;RPB=0.660115;SGB=18.6565;VDB=0.0821776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.6:12252997 chr06:012252997 0 W/12252997-12252997 FN3467-S SNP A -> G AC=1;AN=184;BQB=0.986825;DP=2893;DP4=1453,1365,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.20993e-11;MQSB=0.880077;RPB=0.668458;SGB=71.3514;VDB=0.711838;EFF=INTRON(MODIFIER||||143|LOC_Os06g21210|protein_coding|CODING|LOC_Os06g21210.1|1|1) FN2157-S.SNP.6:12259604 chr06:012259604 0 W/12259604-12259604 FN2157-S SNP C -> G AC=1;AN=168;BQB=9.91576e-06;DP=4119;DP4=2005,2032,23,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.54865e-11;MQSB=0.993229;RPB=0.385153;SGB=-505.137;VDB=0.518297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.6:12259608 chr06:012259608 0 W/12259608-12259608 FN2157-S SNP C -> T AC=1;AN=168;BQB=0.00133592;DP=4151;DP4=2037,2045,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.38508e-11;MQSB=0.971574;RPB=0.984411;SGB=-44.0584;VDB=0.34485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.6:12262006 chr06:012262006 0 W/12262006-12262006 FN3656-S SNP C -> A AC=1;AN=190;BQB=0.999992;DP=3034;DP4=1499,1420,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10676e-05;MQSB=0.955868;RPB=0.999595;SGB=25.439;VDB=0.0398324;EFF=INTRON(MODIFIER||||128|LOC_Os06g21220|protein_coding|CODING|LOC_Os06g21220.1|1|1) FN1227-S.SNP.6:12263672 chr06:012263672 0 W/12263672-12263672 FN1227-S Single Base Substitution C-A INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1509-S.SNP.6:12268819 chr06:012268819 0 W/12268819-12268819 FN1509-S Single Base Substitution T-C INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2229-S.SNP.6:12269191 chr06:012269191 0 W/12269191-12269191 FN2229-S SNP A -> C AC=1;AN=190;BQB=0.917778;DP=4586;DP4=2140,2068,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35415e-10;MQSB=0.983794;RPB=0.989796;SGB=-12.6681;VDB=0.904348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.6:12276370 chr06:012276370 0 W/12276370-12276370 FN2410 SNP G -> A AC=1;AN=200;BQB=0.912273;DP=4390;DP4=2199,1916,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00022779;MQB=1.46519e-08;MQSB=0.855808;RPB=0.266925;SGB=36.6644;VDB=0.796205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.6:12277808 chr06:012277808 0 W/12277808-12277808 FN2582-S SNP G -> C AC=1;AN=198;BQB=0.748895;DP=4282;DP4=2056,2049,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.71047e-08;MQSB=0.99648;RPB=0.680295;SGB=2.96892;VDB=0.444984;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.6:12279497 chr06:012279497 0 W/12279497-12279497 FN1536-S Single Base Substitution A-G INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN574-S.SNP.6:12281159 chr06:012281159 0 W/12281159-12281159 FN574-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g21240 glycine rich protein family protein, putative, expressed SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN1379-S.SNP.6:12281400 chr06:012281400 0 W/12281400-12281400 FN1379-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN956-S.SNP.6:12282169 chr06:012282169 0 W/12282169-12282169 FN956-S Single Base Substitution A-C INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2338.SNP.6:12289677 chr06:012289677 0 W/12289677-12289677 FN2338 SNP A -> G AC=2;AN=192;BQB=0.956401;DP=4317;DP4=2329,1541,21,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.16397e-24;MQSB=0.710194;RPB=0.969921;SGB=181.577;VDB=0.39683;EFF=INTERGENIC(MODIFIER||||||||||1) FN260-S.SNP.6:12306322 chr06:012306322 0 W/12306322-12306322 FN260-S Single Base Substitution A-C INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN-390.SNP.6:12315635 chr06:012315635 0 W/12315635-12315635 FN-390 Single Base Substitution A-G INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-153.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN-153 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-203.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN-203 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-292.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN-292 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-388.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN-388 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN-55.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN-55 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN1123-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN1123-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1239-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN1239-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1463-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN1463-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1553-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN1553-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2280-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN2280-S SNP G -> T AC=2;AN=190;BQB=0.127261;DP=3973;DP4=1797,1840,28,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.50988e-21;MQSB=0.621053;RPB=0.832189;SGB=105.384;VDB=0.403127;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M155I|585|LOC_Os06g21330|protein_coding|CODING|LOC_Os06g21330.1|1|1) FN2349.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN2349 SNP G -> T AC=2;AN=192;BQB=0.310616;DP=4949;DP4=2290,2366,15,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.15537e-18;MQSB=0.990067;RPB=0.87841;SGB=121.76;VDB=0.091138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M155I|585|LOC_Os06g21330|protein_coding|CODING|LOC_Os06g21330.1|1|1) FN3488-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN3488-S SNP G -> T AC=2;AN=184;BQB=0.989769;DP=3499;DP4=1413,1976,13,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.33487e-18;MQSB=0.99777;RPB=0.782675;SGB=68.6673;VDB=0.510962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M155I|585|LOC_Os06g21330|protein_coding|CODING|LOC_Os06g21330.1|1|1) FN355-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN355-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3892-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN3892-S SNP G -> T AC=2;AN=158;BQB=0.554507;DP=2780;DP4=1237,1434,15,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.11692e-13;MQSB=0.918593;RPB=0.999355;SGB=87.9846;VDB=0.924988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M155I|585|LOC_Os06g21330|protein_coding|CODING|LOC_Os06g21330.1|1|1) FN4036-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN4036-S SNP G -> T AC=2;AN=168;BQB=0.214612;DP=2836;DP4=1224,1460,15,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.96069e-09;MQSB=0.875218;RPB=0.958982;SGB=86.2102;VDB=0.271767;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M155I|585|LOC_Os06g21330|protein_coding|CODING|LOC_Os06g21330.1|1|1) FN479-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN479-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN519-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN519-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN698-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN698-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN710-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN710-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN792-S.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN792-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN_N1-202-3.SNP.6:12318935 chr06:012318935 0 W/12318935-12318935 FN_N1-202-3 Single Base Substitution G-T Homo LOC_Os06g21330 ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2392.SNP.6:12324702 chr06:012324702 0 W/12324702-12324702 FN2392 SNP T -> C AC=1;AN=200;BQB=0.783038;DP=4719;DP4=2501,2046,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77037e-11;MQSB=0.943004;RPB=0.694099;SGB=86.5007;VDB=0.360248;EFF=INTRON(MODIFIER||||270|LOC_Os06g21340|protein_coding|CODING|LOC_Os06g21340.1|2|1),INTRON(MODIFIER||||254|LOC_Os06g21340|protein_coding|CODING|LOC_Os06g21340.2|2|1),INTRON(MODIFIER||||112|LOC_Os06g21340|protein_coding|CODING|LOC_Os06g21340.3|1|1) FN4145-S.SNP.6:12329859 chr06:012329859 0 W/12329859-12329859 FN4145-S SNP C -> T AC=2;AN=170;BQB=0.974595;DP=2386;DP4=1140,1140,16,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.54208e-14;MQSB=0.85094;RPB=0.357829;SGB=72.7472;VDB=0.627779;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.6:12332498 chr06:012332498 0 W/12332498-12332498 FN_N1-150-1 Single Base Substitution A-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2191-S.SNP.6:12335538 chr06:012335538 0 W/12335538-12335538 FN2191-S SNP T -> C AC=1;AN=190;BQB=0.724985;DP=5236;DP4=2388,2556,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07136e-10;MQSB=0.840314;RPB=0.352611;SGB=50.3161;VDB=0.760911;EFF=INTRON(MODIFIER||||528|LOC_Os06g21360|protein_coding|CODING|LOC_Os06g21360.1|6|1) FN3342-S.SNP.6:12340025 chr06:012340025 0 W/12340025-12340025 FN3342-S SNP C -> A AC=1;AN=184;BQB=0.900832;DP=3063;DP4=1519,1385,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.5287e-09;MQSB=0.526657;RPB=0.583466;SGB=25.7969;VDB=0.992169;EFF=INTRON(MODIFIER||||192|LOC_Os06g21369|protein_coding|CODING|LOC_Os06g21369.1|1|1) FN2587-S.SNP.6:12344163 chr06:012344163 0 W/12344163-12344163 FN2587-S SNP A -> G AC=2;AN=198;BQB=0.973578;DP=4111;DP4=1889,1972,20,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.49228e-24;MQSB=0.998631;RPB=0.590549;SGB=191.998;VDB=0.0942793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.6:12344492 chr06:012344492 0 W/12344492-12344492 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.999998;DP=4350;DP4=1405,2587,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.9259e-06;MQSB=0.175532;RPB=0.274461;SGB=4.11112;VDB=0.608216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.6:12351610 chr06:012351610 0 W/12351610-12351610 FN2491 SNP C -> T AC=1;AN=200;BQB=0.937808;DP=4881;DP4=2587,2022,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.72418e-07;MQSB=0.984371;RPB=0.701888;SGB=33.0593;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.6:12358815 chr06:012358815 0 W/12358815-12358815 FN584-S Single Base Substitution T-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2447.SNP.6:12362990 chr06:012362990 0 W/12362990-12362990 FN2447 SNP G -> A AC=2;AN=200;BQB=0.999492;DP=4682;DP4=2153,2245,26,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.87578e-33;MQSB=0.705684;RPB=0.862536;SGB=202.502;VDB=0.957123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.6:12365908 chr06:012365908 0 W/12365908-12365908 FN1037-S Single Base Substitution T-G INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2619-S.SNP.6:12368989 chr06:012368989 0 W/12368989-12368989 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.490297;DP=4865;DP4=2470,2055,17,26;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0170606;MQB=0.0175618;MQSB=0;RPB=0.813301;SGB=144.408;VDB=0.868736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.6:12369862 chr06:012369862 0 W/12369862-12369862 FN2118-S SNP C -> T AC=1;AN=168;BQB=0.556066;DP=2702;DP4=659,1987,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00555144;MQB=0.00748448;MQSB=0.805916;RPB=0.663849;SGB=7.05233;VDB=0.607884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.6:12369945 chr06:012369945 0 W/12369945-12369945 FN2721-S SNP C -> T AC=2;AN=200;BQB=0.932822;DP=4519;DP4=2268,2007,12,10;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00287674;MQB=9.85058e-06;MQSB=2.30043e-39;RPB=0.403594;SGB=69.1109;VDB=0.786108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.6:12370057 chr06:012370057 0 W/12370057-12370057 FN1287-S Single Base Substitution C-G INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2619-S.SNP.6:12370988 chr06:012370988 0 W/12370988-12370988 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.822891;DP=4619;DP4=2611,1776,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.221477;MQB=0.725474;MQSB=3.74311e-06;RPB=0.234777;SGB=-7.28946;VDB=0.200103;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.6:12370988 chr06:012370988 0 W/12370988-12370988 FN427-S Single Base Substitution G-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1321-S.SNP.6:12384644 chr06:012384644 0 W/12384644-12384644 FN1321-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g21430 retrotransposon protein, putative, unclassified SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1732-S.SNP.6:12389967 chr06:012389967 0 W/12389967-12389967 FN1732-S SNP C -> G AC=1;AN=188;BQB=0.606518;DP=3745;DP4=1656,2041,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.218158;MQB=0.3034;MQSB=0;RPB=0.817979;SGB=19.4279;VDB=0.477805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.6:12390434 chr06:012390434 0 W/12390434-12390434 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.4834;DP=2413;DP4=1178,1117,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.51883e-07;MQSB=0.0633211;RPB=0.992588;SGB=27.0464;VDB=0.747005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3539-S.SNP.6:12392951 chr06:012392951 0 W/12392951-12392951 FN3539-S SNP C -> T AC=1;AN=188;BQB=0.996522;DP=3890;DP4=2126,1694,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.20252e-09;MQSB=0.580717;RPB=0.876181;SGB=46.6141;VDB=0.192221;EFF=INTRON(MODIFIER||||1174|LOC_Os06g21440|protein_coding|CODING|LOC_Os06g21440.1|1|1) FN3933-S.SNP.6:12397323 chr06:012397323 0 W/12397323-12397323 FN3933-S SNP A -> T AC=1;AN=158;BQB=0.844145;DP=2369;DP4=1062,1182,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.00428e-06;MQSB=0.789367;RPB=0.0790587;SGB=42.6978;VDB=0.238643;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.6:12398707 chr06:012398707 0 W/12398707-12398707 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2579-S.SNP.6:12399739 chr06:012399739 0 W/12399739-12399739 FN2579-S SNP C -> A AC=1;AN=198;BQB=0.56159;DP=4279;DP4=2010,1934,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.67018e-17;MQSB=0.861431;RPB=0.851826;SGB=90.4807;VDB=0.782189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.6:12403552 chr06:012403552 0 W/12403552-12403552 FN2625-S SNP C -> G AC=2;AN=200;BQB=0.400084;DP=4699;DP4=2432,1787,36,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.8237e-31;MQSB=0.343371;RPB=0.998612;SGB=133.692;VDB=0.156496;EFF=UTR_5_PRIME(MODIFIER||702||748|LOC_Os06g21470|protein_coding|CODING|LOC_Os06g21470.1|1|1) FN824-S.SNP.6:12410621 chr06:012410621 0 W/12410621-12410621 FN824-S Single Base Substitution T-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN824-S.SNP.6:12410622 chr06:012410622 0 W/12410622-12410622 FN824-S Single Base Substitution T-G INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2311.SNP.6:12420892 chr06:012420892 0 W/12420892-12420892 FN2311 SNP C -> T AC=1;AN=192;BQB=0.590244;DP=5073;DP4=2112,2589,24,9;HOB=5.42535e-05;ICB=0.000109072;MQ=22;MQ0F=0.43012;MQB=0.0150246;MQSB=0;RPB=0.115727;SGB=-42.7339;VDB=0.225238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.6:12428579 chr06:012428579 0 W/12428579-12428579 FN1048-S Single Base Substitution C-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN_955-1.SNP.6:12434563 chr06:012434563 0 W/12434563-12434563 FN_955-1 Single Base Substitution C-T Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN1703-S.SNP.6:12440578 chr06:012440578 0 W/12440578-12440578 FN1703-S SNP A -> T AC=2;AN=188;BQB=0.74689;DP=3478;DP4=1876,1574,12,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48437e-08;MQSB=0.99331;RPB=0.157631;SGB=53.7007;VDB=0.461507;EFF=INTRON(MODIFIER||||504|LOC_Os06g21570|protein_coding|CODING|LOC_Os06g21570.1|4|1) FN1738-S.SNP.6:12443632 chr06:012443632 0 W/12443632-12443632 FN1738-S SNP C -> T AC=1;AN=188;BQB=0.81051;DP=4136;DP4=1861,2218,17,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36191e-15;MQSB=0.937458;RPB=0.99246;SGB=27.1443;VDB=0.0213614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.6:12445987 chr06:012445987 0 W/12445987-12445987 FN2451 SNP C -> T AC=1;AN=200;BQB=0.974593;DP=4565;DP4=2283,2006,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.70347e-21;MQSB=0.757786;RPB=0.32735;SGB=71.1676;VDB=0.90627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.6:12445988 chr06:012445988 0 W/12445988-12445988 FN2451 SNP T -> C AC=1;AN=200;BQB=0.750378;DP=4579;DP4=2296,1973,21,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.29079e-20;MQSB=0.704087;RPB=0.442836;SGB=137.158;VDB=0.888146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.6:12449908 chr06:012449908 0 W/12449908-12449908 FN1061-S Single Base Substitution T-C INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1528-S.SNP.6:12456513 chr06:012456513 0 W/12456513-12456513 FN1528-S Single Base Substitution C-T INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1528-S.SNP.6:12456519 chr06:012456519 0 W/12456519-12456519 FN1528-S Single Base Substitution A-G INTERGENIC Homo SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1175-S.SNP.6:12469864 chr06:012469864 0 W/12469864-12469864 FN1175-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g21610 transposon protein, putative, unclassified, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1394-S.SNP.6:12472657 chr06:012472657 0 W/12472657-12472657 FN1394-S Single Base Substitution C-T INTRON HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN4135-S.SNP.6:12476812 chr06:012476812 0 W/12476812-12476812 FN4135-S SNP A -> T AC=2;AN=182;BQB=0.890054;DP=2806;DP4=1312,1387,19,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.22657e-18;MQSB=0.372209;RPB=0.994752;SGB=112.867;VDB=0.680972;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.6:12477654 chr06:012477654 0 W/12477654-12477654 FN487-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN545-S.SNP.6:12478673 chr06:012478673 0 W/12478673-12478673 FN545-S Single Base Substitution G-A INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1152-S.SNP.6:12485697 chr06:012485697 0 W/12485697-12485697 FN1152-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g21640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN772-S.SNP.6:12485869 chr06:012485869 0 W/12485869-12485869 FN772-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN669-S.SNP.6:12487683 chr06:012487683 0 W/12487683-12487683 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3862-S.SNP.6:12489137 chr06:012489137 0 W/12489137-12489137 FN3862-S SNP C -> T AC=1;AN=158;BQB=0.995498;DP=2277;DP4=952,1252,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00307422;MQB=0.0131151;MQSB=0.183587;RPB=0.863731;SGB=47.0672;VDB=0.761804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.6:12492557 chr06:012492557 0 W/12492557-12492557 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.962158;DP=2612;DP4=1427,1052,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.20126e-08;MQSB=0.98183;RPB=0.494569;SGB=0.716704;VDB=0.464601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.6:12508060 chr06:012508060 0 W/12508060-12508060 FN4075-S SNP A -> T AC=1;AN=182;BQB=0.74455;DP=4878;DP4=2902,1841,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=22;MQ0F=0.377409;MQB=0.581323;MQSB=0;RPB=0.833282;SGB=15.6115;VDB=0.743718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.6:12509175 chr06:012509175 0 W/12509175-12509175 FN2447 SNP G -> A AC=1;AN=200;BQB=0.616071;DP=4333;DP4=1907,2123,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67565e-07;MQSB=0.438343;RPB=0.986521;SGB=49.6594;VDB=0.0203414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.6:12513296 chr06:012513296 0 W/12513296-12513296 FN2779-S SNP A -> C AC=2;AN=198;BQB=0.199332;DP=4419;DP4=1906,2232,27,24;HOB=0.019998;ICB=0.495001;MQ=43;MQ0F=0.0418647;MQB=1.31777e-08;MQSB=1.00052e-06;RPB=0.948768;SGB=117.578;VDB=0.6768;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Cgt|S355R|367|LOC_Os06g21670|protein_coding|CODING|LOC_Os06g21670.1|4|1) FN3956-S.SNP.6:12517288 chr06:012517288 0 W/12517288-12517288 FN3956-S SNP A -> T AC=1;AN=168;BQB=0.187934;DP=2343;DP4=1112,989,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000216337;MQSB=0.954056;RPB=0.100521;SGB=-17.9574;VDB=0.187282;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.6:12517319 chr06:012517319 0 W/12517319-12517319 W598-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-241.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN-241 Single Base Substitution A-T INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1152-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN1152-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1419-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN1419-S Single Base Substitution A-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1477-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN1477-S Single Base Substitution A-T INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2175-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN2175-S SNP A -> T AC=1;AN=168;BQB=0.0122323;DP=7940;DP4=5007,2828,31,21;HOB=7.08617e-05;ICB=0.000142567;MQ=17;MQ0F=0.546096;MQB=0.000665948;MQSB=0;RPB=0.133785;SGB=-677.823;VDB=0.296762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN2226-S SNP A -> T AC=1;AN=190;BQB=0.99674;DP=5034;DP4=2344,2219,21,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0560191;MQB=5.24732e-07;MQSB=0.00282699;RPB=0.525622;SGB=-7.12933;VDB=0.824201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN2536-S SNP A -> T AC=1;AN=198;BQB=0.492311;DP=4381;DP4=2094,2034,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0595754;MQB=0.000145275;MQSB=0.0015178;RPB=0.99474;SGB=-17.4065;VDB=0.486768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN2703-S SNP A -> T AC=2;AN=200;BQB=0.88232;DP=5236;DP4=2511,2428,26,31;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0487013;MQB=2.73495e-20;MQSB=0.00042147;RPB=0.341712;SGB=195.292;VDB=0.895659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN3388-S SNP A -> T AC=1;AN=184;BQB=0.947795;DP=3519;DP4=1827,1557,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0897982;MQB=1.94858e-05;MQSB=0.936568;RPB=0.768713;SGB=53.3568;VDB=0.829921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN3444-S SNP A -> T AC=1;AN=184;BQB=0.993839;DP=3397;DP4=1748,1506,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0921401;MQB=0.00206452;MQSB=0.931214;RPB=0.261538;SGB=32.2261;VDB=0.261515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN3976-S SNP A -> T AC=2;AN=168;BQB=0.983832;DP=2997;DP4=1436,1424,12,10;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0947614;MQB=5.34159e-06;MQSB=0.965838;RPB=0.562303;SGB=39.2004;VDB=0.651385;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.6:12524160 chr06:012524160 0 W/12524160-12524160 FN440-S Single Base Substitution A-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN3509-S.SNP.6:12532163 chr06:012532163 0 W/12532163-12532163 FN3509-S SNP T -> A AC=1;AN=188;BQB=0.993199;DP=3664;DP4=1893,1568,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000545852;MQB=1.12372e-07;MQSB=0.0258047;RPB=0.949804;SGB=7.0815;VDB=0.158618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.6:12534863 chr06:012534863 0 W/12534863-12534863 FN3510-S SNP A -> G AC=1;AN=188;BQB=0.888254;DP=5753;DP4=1675,3788,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=18;MQ0F=0.503911;MQB=0.00194106;MQSB=0;RPB=0.300665;SGB=11.7114;VDB=0.847724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.6:12536482 chr06:012536482 0 W/12536482-12536482 FN2559-S SNP G -> A AC=2;AN=198;BQB=0.351312;DP=4439;DP4=1828,2354,6,7;HOB=0.019998;ICB=0.495001;MQ=40;MQ0F=0.104979;MQB=0.292657;MQSB=0;RPB=0.875745;SGB=54.144;VDB=0.833674;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.6:12549564 chr06:012549564 0 W/12549564-12549564 FN505-S Single Base Substitution G-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2686-S.SNP.6:12555710 chr06:012555710 0 W/12555710-12555710 FN2686-S SNP T -> C AC=1;AN=200;BQB=0.765881;DP=4588;DP4=2156,2149,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15343e-08;MQSB=0.99899;RPB=0.990746;SGB=36.6644;VDB=0.25876;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D77|111|LOC_Os06g21720|protein_coding|CODING|LOC_Os06g21720.1|1|1) FN-149.SNP.6:12556918 chr06:012556918 0 W/12556918-12556918 FN-149 Single Base Substitution T-C INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2598-S.SNP.6:12559462 chr06:012559462 0 W/12559462-12559462 FN2598-S SNP G -> T AC=2;AN=198;BQB=0.995739;DP=4172;DP4=1936,2029,19,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.69413e-21;MQSB=0.934046;RPB=0.811422;SGB=-1.93338;VDB=0.0859433;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V305F|673|LOC_Os06g21730|protein_coding|CODING|LOC_Os06g21730.1|4|1) FN4258-S.SNP.6:12559549 chr06:012559549 0 W/12559549-12559549 FN4258-S SNP T -> G AC=1;AN=170;BQB=0.959959;DP=2572;DP4=1423,1043,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.33558e-07;MQSB=0.987896;RPB=0.623907;SGB=38.987;VDB=0.306317;EFF=SPLICE_SITE_REGION(LOW||||673|LOC_Os06g21730|protein_coding|CODING|LOC_Os06g21730.1|4|1),INTRON(MODIFIER||||673|LOC_Os06g21730|protein_coding|CODING|LOC_Os06g21730.1|4|1) FN4133-S.SNP.6:12560052 chr06:012560052 0 W/12560052-12560052 FN4133-S SNP G -> A AC=2;AN=182;BQB=0.697338;DP=3199;DP4=1393,1722,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.63218e-13;MQSB=0.995091;RPB=0.964188;SGB=74.2472;VDB=0.552319;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||673|LOC_Os06g21730|protein_coding|CODING|LOC_Os06g21730.1|6|1),INTRON(MODIFIER||||673|LOC_Os06g21730|protein_coding|CODING|LOC_Os06g21730.1|5|1);LOF=(LOC_Os06g21730|LOC_Os06g21730|1|1.00) FN3787-S.SNP.6:12562482 chr06:012562482 0 W/12562482-12562482 FN3787-S SNP C -> T AC=2;AN=188;BQB=0.982182;DP=3027;DP4=1474,1420,20,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.60825e-17;MQSB=0.862718;RPB=0.823015;SGB=126.511;VDB=0.183067;EFF=INTRON(MODIFIER||||1326|LOC_Os06g21740|protein_coding|CODING|LOC_Os06g21740.1|7|1) FN229-S.SNP.6:12562609 chr06:012562609 0 W/12562609-12562609 FN229-S Single Base Substitution C-T INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN990-S.SNP.6:12565820 chr06:012565820 0 W/12565820-12565820 FN990-S Single Base Substitution G-A INTRON HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-365.SNP.6:12574668 chr06:012574668 0 W/12574668-12574668 FN-365 Single Base Substitution C-T INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN3528-S.SNP.6:12574917 chr06:012574917 0 W/12574917-12574917 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.987879;DP=4249;DP4=2592,1561,16,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.94192e-12;MQSB=0.103278;RPB=0.996067;SGB=103.498;VDB=0.245128;EFF=INTERGENIC(MODIFIER||||||||||1) FN906-S.SNP.6:12581173 chr06:012581173 0 W/12581173-12581173 FN906-S Single Base Substitution C-A INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN566-S.SNP.6:12584088 chr06:012584088 0 W/12584088-12584088 FN566-S Single Base Substitution C-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN436-S.SNP.6:12584931 chr06:012584931 0 W/12584931-12584931 FN436-S Single Base Substitution A-G INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN436-S.SNP.6:12584936 chr06:012584936 0 W/12584936-12584936 FN436-S Single Base Substitution T-A INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3698-S.SNP.6:12589799 chr06:012589799 0 W/12589799-12589799 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.717969;DP=2779;DP4=1304,1394,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000394649;MQSB=0.0244456;RPB=0.922768;SGB=25.439;VDB=0.380974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A1137V|1149|LOC_Os06g21780|protein_coding|CODING|LOC_Os06g21780.1|5|1) FN885-S.SNP.6:12591436 chr06:012591436 0 W/12591436-12591436 FN885-S Single Base Substitution C-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. W463-2-1.SNP.6:12595622 chr06:012595622 0 W/12595622-12595622 W463-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3839-S.SNP.6:12597292 chr06:012597292 0 W/12597292-12597292 FN3839-S SNP G -> A AC=1;AN=188;BQB=0.990276;DP=2484;DP4=1156,1241,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00201288;MQB=1.0868e-07;MQSB=0.446065;RPB=0.894754;SGB=49.0954;VDB=0.94034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.6:12597296 chr06:012597296 0 W/12597296-12597296 FN3839-S SNP T -> C AC=1;AN=188;BQB=0.981785;DP=2487;DP4=1178,1248,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00201045;MQB=1.21814e-07;MQSB=0.341841;RPB=0.962168;SGB=21.1058;VDB=0.860871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.6:12597298 chr06:012597298 0 W/12597298-12597298 FN3839-S SNP G -> A AC=1;AN=188;BQB=0.749156;DP=2465;DP4=1171,1208,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00162272;MQB=1.04644e-07;MQSB=0.353924;RPB=0.991592;SGB=49.0954;VDB=0.937491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.6:12603543 chr06:012603543 0 W/12603543-12603543 FN2771-S SNP C -> T AC=2;AN=198;BQB=0.662859;DP=4210;DP4=2057,1771,39,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.50662e-27;MQSB=0.369034;RPB=0.0364889;SGB=10.5641;VDB=0.989538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.6:12604418 chr06:012604418 0 W/12604418-12604418 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.957006;DP=2282;DP4=1041,1146,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.63435e-06;MQSB=0.814898;RPB=0.999517;SGB=51.4366;VDB=0.938216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.6:12605210 chr06:012605210 0 W/12605210-12605210 FN2462 SNP C -> A AC=1;AN=200;BQB=0.9975;DP=3941;DP4=2068,1678,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20845e-07;MQSB=0.997084;RPB=0.870781;SGB=33.0593;VDB=0.83435;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I13|349|LOC_Os06g21820|protein_coding|CODING|LOC_Os06g21820.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I46|382|LOC_Os06g21820|protein_coding|CODING|LOC_Os06g21820.1|2|1) FN1062-S.SNP.6:12606826 chr06:012606826 0 W/12606826-12606826 FN1062-S Single Base Substitution G-C INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3387-S.SNP.6:12608987 chr06:012608987 0 W/12608987-12608987 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.878212;DP=3360;DP4=1542,1735,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27058e-08;MQSB=0.998709;RPB=0.990571;SGB=53.2642;VDB=0.0940961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T62M|171|LOC_Os06g21830|protein_coding|CODING|LOC_Os06g21830.1|1|1) FN2739-S.SNP.6:12611143 chr06:012611143 0 W/12611143-12611143 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.976061;DP=4554;DP4=2392,1924,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24353e-14;MQSB=0.994726;RPB=0.618357;SGB=20.7261;VDB=0.757783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.6:12614874 chr06:012614874 0 W/12614874-12614874 FN1150-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1689-S.SNP.6:12614931 chr06:012614931 0 W/12614931-12614931 FN1689-S SNP G -> C AC=2;AN=188;BQB=0.520648;DP=1286;DP4=626,602,6,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.00113973;MQSB=0.966864;RPB=0.911934;SGB=10.8165;VDB=0.929401;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.6:12616423 chr06:012616423 0 W/12616423-12616423 FN2240-S SNP G -> A AC=1;AN=190;BQB=0.459476;DP=3888;DP4=2028,1611,6,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000145318;MQSB=0.498704;RPB=0.61577;SGB=26.3271;VDB=0.93587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.6:12619528 chr06:012619528 0 W/12619528-12619528 FN2411 SNP C -> T AC=2;AN=200;BQB=0.99255;DP=4201;DP4=2160,1761,25,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000238039;MQB=2.84316e-18;MQSB=3.56037e-17;RPB=0.242075;SGB=152.03;VDB=0.280499;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.6:12619528 chr06:012619528 0 W/12619528-12619528 FN564-S Single Base Substitution C-T INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN3115-S.SNP.6:12627501 chr06:012627501 0 W/12627501-12627501 FN3115-S SNP A -> G AC=1;AN=184;BQB=0.980197;DP=2702;DP4=1156,1407,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=18;MQ0F=0.363064;MQB=0.0884973;MQSB=0.00051481;RPB=0.960277;SGB=98.4821;VDB=0.488816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N287S|725|LOC_Os06g21860|protein_coding|CODING|LOC_Os06g21860.1|2|1) FN3527-S.SNP.6:12632936 chr06:012632936 0 W/12632936-12632936 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.672881;DP=2600;DP4=1305,1242,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.72182e-06;MQSB=0.742469;RPB=0.311594;SGB=48.979;VDB=0.0734582;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.6:12637331 chr06:012637331 0 W/12637331-12637331 FN4183-S SNP C -> T AC=1;AN=170;BQB=0.956898;DP=2226;DP4=1162,1001,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.35316e-07;MQSB=0.986467;RPB=0.0663419;SGB=31.4354;VDB=0.470998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.6:12641398 chr06:012641398 0 W/12641398-12641398 FN3530-S SNP G -> C AC=1;AN=188;BQB=0.945496;DP=2647;DP4=1316,1240,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000377786;MQB=5.21079e-10;MQSB=0.999047;RPB=0.923118;SGB=57.244;VDB=0.706119;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.6:12642981 chr06:012642981 0 W/12642981-12642981 FN-213 Single Base Substitution G-A INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3579-S.SNP.6:12646177 chr06:012646177 0 W/12646177-12646177 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.951187;DP=3056;DP4=1537,1435,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.87477e-09;MQSB=0.991568;RPB=0.963171;SGB=71.6954;VDB=0.171568;EFF=INTRON(MODIFIER||||117|LOC_Os06g21880|protein_coding|CODING|LOC_Os06g21880.1|1|1) FN828-S.SNP.6:12648210 chr06:012648210 0 W/12648210-12648210 FN828-S Single Base Substitution G-A INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN825-S.SNP.6:12648228 chr06:012648228 0 W/12648228-12648228 FN825-S Single Base Substitution C-T INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN4099-S.SNP.6:12651207 chr06:012651207 0 W/12651207-12651207 FN4099-S SNP G -> T AC=2;AN=182;BQB=0.96163;DP=2598;DP4=1255,1261,16,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.38245e-20;MQSB=0.9985;RPB=0.969556;SGB=143.35;VDB=0.153788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.6:12657567 chr06:012657567 0 W/12657567-12657567 FN3332-S SNP C -> A AC=2;AN=184;BQB=0.979257;DP=4073;DP4=2239,1685,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.02441e-12;MQSB=0.663899;RPB=0.847754;SGB=78.0093;VDB=0.781214;EFF=INTRON(MODIFIER||||642|LOC_Os06g21900|protein_coding|CODING|LOC_Os06g21900.1|4|1) FN4129-S.SNP.6:12669740 chr06:012669740 0 W/12669740-12669740 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.972135;DP=2809;DP4=1576,1163,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.2186e-07;MQSB=0.961457;RPB=0.884966;SGB=53.1331;VDB=0.753212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.6:12670973 chr06:012670973 0 W/12670973-12670973 FN2364 SNP G -> C AC=1;AN=192;BQB=0.846343;DP=4280;DP4=1935,2134,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000233645;MQB=7.26909e-06;MQSB=0.68729;RPB=0.709426;SGB=21.9585;VDB=0.548442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.6:12671178 chr06:012671178 0 W/12671178-12671178 FN-399 Single Base Substitution C-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN-172.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN-172 Single Base Substitution C-T INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1222-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN1222-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1264-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN1320-S Single Base Substitution C-T INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1514-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN1514-S Single Base Substitution C-T INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2125-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN2125-S SNP C -> T AC=2;AN=168;BQB=0.355987;DP=2501;DP4=927,1506,8,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.45885e-10;MQSB=0.671503;RPB=0.865246;SGB=-144.333;VDB=0.222645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN3375-S SNP C -> T AC=2;AN=184;BQB=0.938621;DP=3439;DP4=1713,1589,16,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.45407e-17;MQSB=0.979103;RPB=0.351539;SGB=106.184;VDB=0.0934852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN3853-S SNP C -> T AC=1;AN=158;BQB=0.912264;DP=2641;DP4=1248,1276,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.07088e-11;MQSB=0.99132;RPB=0.50141;SGB=26.1881;VDB=0.42167;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN4009-S SNP C -> T AC=1;AN=168;BQB=0.989433;DP=2650;DP4=1260,1267,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.46656e-06;MQSB=0.934441;RPB=0.948897;SGB=27.8864;VDB=0.332122;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN508-S Single Base Substitution C-T INTERGENIC HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN618-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN618-S Single Base Substitution C-T INTERGENIC HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN887-S.SNP.6:12672722 chr06:012672722 0 W/12672722-12672722 FN887-S Single Base Substitution C-T INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2150-S.SNP.6:12675771 chr06:012675771 0 W/12675771-12675771 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.00308441;DP=3720;DP4=1868,1806,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.62469e-07;MQSB=0.967499;RPB=0.621922;SGB=-354.451;VDB=0.625011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.6:12677145 chr06:012677145 0 W/12677145-12677145 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.687865;DP=5142;DP4=2719,2164,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.1972e-12;MQSB=0.485143;RPB=0.846319;SGB=65.5058;VDB=0.923938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.6:12680150 chr06:012680150 0 W/12680150-12680150 FN3837-S SNP C -> G AC=1;AN=190;BQB=0.976059;DP=3118;DP4=1150,1855,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15816e-06;MQSB=0.268643;RPB=0.579004;SGB=39.9877;VDB=0.551647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.6:12681131 chr06:012681131 0 W/12681131-12681131 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.934308;DP=3571;DP4=1917,1561,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75704e-08;MQSB=0.742761;RPB=0.99154;SGB=49.835;VDB=0.680995;EFF=UTR_5_PRIME(MODIFIER||33||211|LOC_Os06g21920|protein_coding|CODING|LOC_Os06g21920.1|1|1) FN4185-S.SNP.6:12681324 chr06:012681324 0 W/12681324-12681324 FN4185-S SNP C -> A AC=2;AN=170;BQB=0.996424;DP=2708;DP4=1583,1041,22,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.25053e-17;MQSB=0.996406;RPB=0.90435;SGB=100.288;VDB=0.813453;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S54Y|211|LOC_Os06g21920|protein_coding|CODING|LOC_Os06g21920.1|1|1) FN-295.SNP.6:12683419 chr06:012683419 0 W/12683419-12683419 FN-295 Single Base Substitution T-G INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-59.SNP.6:12683481 chr06:012683481 0 W/12683481-12683481 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2653-S.SNP.6:12689291 chr06:012689291 0 W/12689291-12689291 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.997417;DP=5067;DP4=2337,2474,15,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.37913e-16;MQSB=0.982352;RPB=0.982017;SGB=65.9573;VDB=0.318878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.6:12700003 chr06:012700003 0 W/12700003-12700003 FN-392 Single Base Substitution T-C INTERGENIC HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN3452-S.SNP.6:12701063 chr06:012701063 0 W/12701063-12701063 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.970397;DP=3500;DP4=1572,1859,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91484e-09;MQSB=0.999639;RPB=0.775796;SGB=53.3568;VDB=0.259706;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S208|245|LOC_Os06g21960|protein_coding|CODING|LOC_Os06g21960.1|2|1) FN1109-S.SNP.6:12702198 chr06:012702198 0 W/12702198-12702198 FN1109-S Single Base Substitution C-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN_N1-169-1.SNP.6:12703208 chr06:012703208 0 W/12703208-12703208 FN_N1-169-1 Single Base Substitution T-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN-197.SNP.6:12706045 chr06:012706045 0 W/12706045-12706045 FN-197 Single Base Substitution G-T INTERGENIC HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN1108-S.SNP.6:12709952 chr06:012709952 0 W/12709952-12709952 FN1108-S Single Base Substitution A-T INTRON HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1050-S.SNP.6:12718864 chr06:012718864 0 W/12718864-12718864 FN1050-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g21990 retrotransposon protein, putative, unclassified, expressed SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2295.SNP.6:12720702 chr06:012720702 0 W/12720702-12720702 FN2295 SNP C -> T AC=2;AN=192;BQB=0.132767;DP=4834;DP4=2249,2332,26,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.46693e-33;MQSB=0.851271;RPB=0.222653;SGB=185.918;VDB=0.0627021;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y696|855|LOC_Os06g21990|protein_coding|CODING|LOC_Os06g21990.1|4|1) FN687-S.SNP.6:12720998 chr06:012720998 0 W/12720998-12720998 FN687-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g21990 retrotransposon protein, putative, unclassified, expressed SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2310.SNP.6:12723313 chr06:012723313 0 W/12723313-12723313 FN2310 SNP G -> A AC=1;AN=192;BQB=0.453737;DP=4357;DP4=1986,1954,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.47561e-11;MQSB=0.17008;RPB=0.840987;SGB=-7.9965;VDB=0.580753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.6:12751238 chr06:012751238 0 W/12751238-12751238 FN2697-S SNP T -> A AC=2;AN=200;BQB=0.442267;DP=4549;DP4=2225,2036,34,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.03603e-34;MQSB=0.946227;RPB=0.368643;SGB=202.502;VDB=0.0348299;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.6:12768566 chr06:012768566 0 W/12768566-12768566 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1371-S.SNP.6:12773057 chr06:012773057 0 W/12773057-12773057 FN1371-S Single Base Substitution T-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN1371-S.SNP.6:12773058 chr06:012773058 0 W/12773058-12773058 FN1371-S Single Base Substitution C-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2282.SNP.6:12776358 chr06:012776358 0 W/12776358-12776358 FN2282 SNP G -> T AC=1;AN=192;BQB=0.977771;DP=4618;DP4=2034,2296,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03525e-16;MQSB=0.768746;RPB=0.995673;SGB=30.82;VDB=0.987519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.6:12782574 chr06:012782574 0 W/12782574-12782574 FN3668-S SNP A -> G AC=1;AN=190;BQB=0.605255;DP=2718;DP4=1354,1138,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000367918;MQB=2.67845e-08;MQSB=0.440272;RPB=0.745057;SGB=36.1006;VDB=0.531485;EFF=UTR_5_PRIME(MODIFIER||74||229|LOC_Os06g22050|protein_coding|CODING|LOC_Os06g22050.1|1|1) FN3481-S.SNP.6:12794902 chr06:012794902 0 W/12794902-12794902 FN3481-S SNP G -> A AC=2;AN=184;BQB=0.292592;DP=2868;DP4=1281,1480,16,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.16003e-15;MQSB=0.870863;RPB=0.323716;SGB=120.271;VDB=0.0696151;EFF=INTRON(MODIFIER||||622|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.1|1|1),INTRON(MODIFIER||||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.2|1|1),INTRON(MODIFIER||||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.3|1|1) FN2788-S.SNP.6:12795361 chr06:012795361 0 W/12795361-12795361 FN2788-S SNP G -> C AC=1;AN=198;BQB=0.966551;DP=4128;DP4=2196,1684,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.78081e-07;MQSB=0.923964;RPB=0.970115;SGB=29.3637;VDB=0.884455;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtC|V52|622|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.1|2|1),UTR_5_PRIME(MODIFIER||1107||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.4|1|1),UTR_5_PRIME(MODIFIER||1107||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.5|1|1),UTR_5_PRIME(MODIFIER||1107||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.2|2|1),UTR_5_PRIME(MODIFIER||1107||445|LOC_Os06g22060|protein_coding|CODING|LOC_Os06g22060.3|2|1) FN934-S.SNP.6:12797715 chr06:012797715 0 W/12797715-12797715 FN934-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os06g22060 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2765-S.SNP.6:12805544 chr06:012805544 0 W/12805544-12805544 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.682972;DP=4191;DP4=1912,1956,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.72256e-16;MQSB=0.406658;RPB=0.930709;SGB=123.071;VDB=0.178322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.6:12812135 chr06:012812135 0 W/12812135-12812135 FN3923-S SNP C -> T AC=1;AN=158;BQB=0.984341;DP=2411;DP4=1256,1108,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.63731e-06;MQSB=0.872748;RPB=0.996137;SGB=33.9591;VDB=0.58687;EFF=UTR_3_PRIME(MODIFIER||584||172|LOC_Os06g22080|protein_coding|CODING|LOC_Os06g22080.3|8|1),UTR_3_PRIME(MODIFIER||21||370|LOC_Os06g22080|protein_coding|CODING|LOC_Os06g22080.1|8|1) FN1402-S.SNP.6:12812975 chr06:012812975 0 W/12812975-12812975 FN1402-S Single Base Substitution A-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN824-S.SNP.6:12825127 chr06:012825127 0 W/12825127-12825127 FN824-S Single Base Substitution A-C INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3613-S.SNP.6:12828976 chr06:012828976 0 W/12828976-12828976 FN3613-S SNP G -> A AC=1;AN=190;BQB=0.895384;DP=2740;DP4=1222,1408,7,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.97821e-12;MQSB=0.999636;RPB=0.998946;SGB=44.0907;VDB=0.920036;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.6:12830281 chr06:012830281 0 W/12830281-12830281 FN2094-S SNP T -> A AC=1;AN=168;BQB=0.456047;DP=3223;DP4=1560,1629,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.6354e-11;MQSB=0.976643;RPB=0.801788;SGB=-12.3568;VDB=0.262856;EFF=INTERGENIC(MODIFIER||||||||||1) FN322-S.SNP.6:12832029 chr06:012832029 0 W/12832029-12832029 FN322-S Single Base Substitution G-A INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN-336.SNP.6:12833824 chr06:012833824 0 W/12833824-12833824 FN-336 Single Base Substitution A-C INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN859-S.SNP.6:12835368 chr06:012835368 0 W/12835368-12835368 FN859-S Single Base Substitution C-T INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN633-S.SNP.6:12836975 chr06:012836975 0 W/12836975-12836975 FN633-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g22110 retrotransposon protein, putative, unclassified, expressed SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3827-S.SNP.6:12841899 chr06:012841899 0 W/12841899-12841899 FN3827-S SNP C -> A AC=1;AN=190;BQB=0.918431;DP=2579;DP4=1185,1304,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.43889e-06;MQSB=0.910705;RPB=0.923619;SGB=21.8853;VDB=0.620767;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A102S|105|LOC_Os06g22130|protein_coding|CODING|LOC_Os06g22130.1|2|1) FN738-S.SNP.6:12853604 chr06:012853604 0 W/12853604-12853604 FN738-S Single Base Substitution A-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN1345-S.SNP.6:12858137 chr06:012858137 0 W/12858137-12858137 FN1345-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2118-S.SNP.6:12860247 chr06:012860247 0 W/12860247-12860247 FN2118-S SNP T -> A AC=1;AN=168;BQB=0.906792;DP=2110;DP4=828,1179,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.64182e-08;MQSB=0.988616;RPB=0.936356;SGB=24.6155;VDB=0.866463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N115I|165|LOC_Os06g22150|protein_coding|CODING|LOC_Os06g22150.1|1|1) W721-2-1.SNP.6:12862310 chr06:012862310 0 W/12862310-12862310 W721-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. W721-2-1.SNP.6:12862312 chr06:012862312 0 W/12862312-12862312 W721-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. W721-2-1.SNP.6:12862316 chr06:012862316 0 W/12862316-12862316 W721-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN947-S.SNP.6:12863567 chr06:012863567 0 W/12863567-12863567 FN947-S Single Base Substitution G-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1410-S.SNP.6:12865294 chr06:012865294 0 W/12865294-12865294 FN1410-S Single Base Substitution G-A INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN3809-S.SNP.6:12865575 chr06:012865575 0 W/12865575-12865575 FN3809-S SNP C -> T AC=2;AN=190;BQB=0.991929;DP=2606;DP4=1258,1216,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.70753e-14;MQSB=0.983103;RPB=0.0138296;SGB=108.296;VDB=0.207266;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.6:12871063 chr06:012871063 0 W/12871063-12871063 FN518-S Single Base Substitution G-A INTRON HOMO SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2691-S.SNP.6:12872771 chr06:012872771 0 W/12872771-12872771 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.819934;DP=4822;DP4=2330,2296,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.99675e-06;MQSB=0.896789;RPB=0.96078;SGB=45.0543;VDB=0.231252;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.6:12872860 chr06:012872860 0 W/12872860-12872860 FN4208-S SNP T -> C AC=1;AN=170;BQB=0.891001;DP=2289;DP4=1035,1169,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.25214e-07;MQSB=0.868135;RPB=0.998796;SGB=31.4354;VDB=0.480387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.6:12875867 chr06:012875867 0 W/12875867-12875867 FN2625-S SNP A -> G AC=2;AN=200;BQB=0.556918;DP=4633;DP4=2120,2239,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000431686;MQB=5.33472e-28;MQSB=0.778647;RPB=0.95588;SGB=65.6709;VDB=0.0823676;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.6:12883464 chr06:012883464 0 W/12883464-12883464 FN416-S Single Base Substitution C-T INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN-73.SNP.6:12887652 chr06:012887652 0 W/12887652-12887652 FN-73 Single Base Substitution G-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2149-S.SNP.6:12887652 chr06:012887652 0 W/12887652-12887652 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.240267;DP=1860;DP4=1327,476,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000537634;MQB=0.000676701;MQSB=0.181466;RPB=0.437161;SGB=-17.5266;VDB=0.571213;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.6:12887652 chr06:012887652 0 W/12887652-12887652 FN2195-S SNP G -> A AC=2;AN=190;BQB=0.895673;DP=3588;DP4=1832,1429,12,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000278707;MQB=7.14504e-10;MQSB=0.00163866;RPB=0.996358;SGB=68.0854;VDB=0.743489;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.6:12887652 chr06:012887652 0 W/12887652-12887652 FN_552-1-1 Single Base Substitution G-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1325-S.SNP.6:12887705 chr06:012887705 0 W/12887705-12887705 FN1325-S Single Base Substitution C-A INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2588-S.SNP.6:12888957 chr06:012888957 0 W/12888957-12888957 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.671357;DP=4138;DP4=1915,1952,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.0821e-13;MQSB=0.847036;RPB=0.812443;SGB=52.7004;VDB=0.805154;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.6:12896874 chr06:012896874 0 W/12896874-12896874 FN2577-S SNP C -> T AC=2;AN=198;BQB=0.664867;DP=4213;DP4=1970,2004,12,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.00315e-13;MQSB=0.744848;RPB=0.0686152;SGB=65.3149;VDB=0.0413023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V565I|1430|LOC_Os06g22230|protein_coding|CODING|LOC_Os06g22230.1|5|1) W481-5-1.SNP.6:12904691 chr06:012904691 0 W/12904691-12904691 W481-5-1 Single Base Substitution G-A INTRON HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN416-S.SNP.6:12905511 chr06:012905511 0 W/12905511-12905511 FN416-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3892-S.SNP.6:12905785 chr06:012905785 0 W/12905785-12905785 FN3892-S SNP A -> T AC=1;AN=158;BQB=0.768167;DP=2500;DP4=1264,1164,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.0004;MQB=2.55476e-05;MQSB=0.376353;RPB=0.26356;SGB=17.2267;VDB=0.182239;EFF=INTRON(MODIFIER||||1131|LOC_Os06g22240|protein_coding|CODING|LOC_Os06g22240.1|3|1) FN3892-S.SNP.6:12905786 chr06:012905786 0 W/12905786-12905786 FN3892-S SNP G -> T AC=1;AN=158;BQB=0.72452;DP=2500;DP4=1251,1171,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.64645e-05;MQSB=0.370683;RPB=0.199189;SGB=25.2211;VDB=0.17561;EFF=INTRON(MODIFIER||||1131|LOC_Os06g22240|protein_coding|CODING|LOC_Os06g22240.1|3|1) FN3833-S.SNP.6:12906799 chr06:012906799 0 W/12906799-12906799 FN3833-S SNP A -> C AC=1;AN=190;BQB=0.985268;DP=2944;DP4=1395,1434,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.04187e-08;MQSB=0.993719;RPB=0.900004;SGB=46.7622;VDB=0.168442;EFF=INTRON(MODIFIER||||1131|LOC_Os06g22240|protein_coding|CODING|LOC_Os06g22240.1|5|1) FN734-S.SNP.6:12907875 chr06:012907875 0 W/12907875-12907875 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3417-S.SNP.6:12909769 chr06:012909769 0 W/12909769-12909769 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.842646;DP=3762;DP4=1680,1963,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19401e-12;MQSB=0.998859;RPB=0.825826;SGB=84.9167;VDB=0.080746;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.6:12913214 chr06:012913214 0 W/12913214-12913214 FN3932-S SNP G -> A AC=2;AN=158;BQB=0.969237;DP=2197;DP4=1070,1036,11,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.58665e-14;MQSB=0.99944;RPB=0.97935;SGB=95.131;VDB=0.990958;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.6:12921422 chr06:012921422 0 W/12921422-12921422 FN728-S Single Base Substitution A-G INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN-333.SNP.6:12936826 chr06:012936826 0 W/12936826-12936826 FN-333 Single Base Substitution G-A INTERGENIC HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1213-S.SNP.6:12937020 chr06:012937020 0 W/12937020-12937020 FN1213-S Single Base Substitution A-C INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1071-S.SNP.6:12938829 chr06:012938829 0 W/12938829-12938829 FN1071-S Single Base Substitution C-T INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN2556-S.SNP.6:12940620 chr06:012940620 0 W/12940620-12940620 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.430094;DP=4163;DP4=2233,1705,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04358e-12;MQSB=0.909096;RPB=0.701865;SGB=18.9201;VDB=0.834718;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.6:12945098 chr06:012945098 0 W/12945098-12945098 W252-6-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2542-S.SNP.6:12955659 chr06:012955659 0 W/12955659-12955659 FN2542-S SNP G -> T AC=1;AN=198;BQB=0.353826;DP=3138;DP4=1388,1617,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000334377;MQSB=0.267425;RPB=0.318973;SGB=40.3588;VDB=0.356497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.6:12959088 chr06:012959088 0 W/12959088-12959088 FN4128-S SNP G -> A AC=2;AN=182;BQB=0.958214;DP=2992;DP4=1674,1234,8,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.70698e-12;MQSB=0.00822695;RPB=0.887041;SGB=75.6874;VDB=0.00800274;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G486|888|LOC_Os06g22320|protein_coding|CODING|LOC_Os06g22320.1|4|1) FN4128-S.SNP.6:12959089 chr06:012959089 0 W/12959089-12959089 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.999016;DP=3002;DP4=1674,1236,9,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.74259e-13;MQSB=0.00526315;RPB=0.839687;SGB=80.1982;VDB=0.0107459;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G486D|888|LOC_Os06g22320|protein_coding|CODING|LOC_Os06g22320.1|4|1) FN4128-S.SNP.6:12959090 chr06:012959090 0 W/12959090-12959090 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.886602;DP=3005;DP4=1678,1237,10,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.16029e-13;MQSB=0.00520255;RPB=0.985434;SGB=60.2037;VDB=0.0149404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G486S|888|LOC_Os06g22320|protein_coding|CODING|LOC_Os06g22320.1|4|1) FN457-S.SNP.6:12961534 chr06:012961534 0 W/12961534-12961534 FN457-S Single Base Substitution G-T INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN2485.SNP.6:12961714 chr06:012961714 0 W/12961714-12961714 FN2485 SNP C -> T AC=1;AN=200;BQB=0.999404;DP=4992;DP4=2469,2277,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41798e-15;MQSB=0.531712;RPB=0.921764;SGB=94.3471;VDB=0.0663603;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.6:12964630 chr06:012964630 0 W/12964630-12964630 FN2448 SNP G -> A AC=2;AN=200;BQB=0.163308;DP=4720;DP4=2067,2389,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.81274e-17;MQSB=0.945411;RPB=0.908325;SGB=30.3571;VDB=0.107384;EFF=INTRON(MODIFIER||||521|LOC_Os06g22330|protein_coding|CODING|LOC_Os06g22330.1|1|1) FN2596-S.SNP.6:12967864 chr06:012967864 0 W/12967864-12967864 FN2596-S SNP A -> T AC=1;AN=198;BQB=0.14685;DP=3934;DP4=1706,1632,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.55601e-08;MQSB=0.979404;RPB=0.840544;SGB=-81.0108;VDB=0.880155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V405D|514|LOC_Os06g22340|protein_coding|CODING|LOC_Os06g22340.1|1|1) FN3987-S.SNP.6:12970890 chr06:012970890 0 W/12970890-12970890 FN3987-S SNP T -> C AC=2;AN=168;BQB=0.690699;DP=2660;DP4=1382,1149,23,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4665e-21;MQSB=0.942687;RPB=0.692067;SGB=180.666;VDB=0.097727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.6:12971048 chr06:012971048 0 W/12971048-12971048 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.000362351;DP=4145;DP4=1580,2424,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29242e-05;MQSB=0.404259;RPB=0.930891;SGB=-164.05;VDB=0.558121;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.6:12972943 chr06:012972943 0 W/12972943-12972943 FN464-S Single Base Substitution G-A INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN4279-S.SNP.6:12974871 chr06:012974871 0 W/12974871-12974871 FN4279-S SNP A -> C AC=2;AN=170;BQB=0.909129;DP=2438;DP4=1210,1125,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.70167e-14;MQSB=0.987939;RPB=0.980624;SGB=83.0751;VDB=0.843416;EFF=INTRON(MODIFIER||||311|LOC_Os06g22350|protein_coding|CODING|LOC_Os06g22350.1|6|1) FN2667-S.SNP.6:12977409 chr06:012977409 0 W/12977409-12977409 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.921606;DP=5218;DP4=2553,2375,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.20889e-15;MQSB=0.880204;RPB=0.820351;SGB=72.7161;VDB=0.0226624;EFF=INTRON(MODIFIER||||311|LOC_Os06g22350|protein_coding|CODING|LOC_Os06g22350.1|1|1) FN673-S.SNP.6:12981940 chr06:012981940 0 W/12981940-12981940 FN673-S Single Base Substitution C-T INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN3597-S.SNP.6:12982008 chr06:012982008 0 W/12982008-12982008 FN3597-S SNP A -> C AC=1;AN=188;BQB=0.871204;DP=3387;DP4=993,2103,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.60151e-06;MQSB=0.933037;RPB=0.530617;SGB=18.4463;VDB=0.110458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.6:12988236 chr06:012988236 0 W/12988236-12988236 FN1278-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g22370 expressed protein SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2130-S.SNP.6:12991107 chr06:012991107 0 W/12991107-12991107 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.0730989;DP=3317;DP4=1642,1643,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000202117;MQSB=0.865149;RPB=0.207105;SGB=-108.641;VDB=0.520816;EFF=UTR_3_PRIME(MODIFIER||2259||225|LOC_Os06g22380|protein_coding|CODING|LOC_Os06g22380.1|11|1) FN2160-S.SNP.6:12994253 chr06:012994253 0 W/12994253-12994253 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.751184;DP=3624;DP4=1865,1700,17,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.52999e-18;MQSB=0.998918;RPB=0.967649;SGB=-8.47945;VDB=0.787546;EFF=INTRON(MODIFIER||||225|LOC_Os06g22380|protein_coding|CODING|LOC_Os06g22380.1|3|1) FN3316-S.SNP.6:12997666 chr06:012997666 0 W/12997666-12997666 FN3316-S SNP A -> G AC=1;AN=184;BQB=0.951983;DP=2884;DP4=1350,1438,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.64693e-07;MQSB=0.923347;RPB=0.695663;SGB=39.699;VDB=0.494821;EFF=INTRON(MODIFIER||||225|LOC_Os06g22380|protein_coding|CODING|LOC_Os06g22380.1|3|1) FN915-S.SNP.6:13004498 chr06:013004498 0 W/13004498-13004498 FN915-S Single Base Substitution G-A INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2765-S.SNP.6:13005025 chr06:013005025 0 W/13005025-13005025 FN2765-S SNP T -> C AC=1;AN=198;BQB=0.848815;DP=3475;DP4=1352,1873,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00057554;MQB=0.00029885;MQSB=1.6561e-15;RPB=0.946866;SGB=25.7687;VDB=0.482741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.6:13007430 chr06:013007430 0 W/13007430-13007430 FN2165-S SNP A -> T AC=1;AN=168;BQB=0.0152725;DP=4231;DP4=2286,1911,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10913e-06;MQSB=0.958009;RPB=0.843473;SGB=-15.8033;VDB=0.282031;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.6:13009089 chr06:013009089 0 W/13009089-13009089 FN-157 Single Base Substitution C-T INTERGENIC HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.6:13009090 chr06:013009090 0 W/13009090-13009090 FN-157 Single Base Substitution G-T INTERGENIC HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.6:13009101 chr06:013009101 0 W/13009101-13009101 FN-157 Single Base Substitution G-T INTERGENIC HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2385.SNP.6:13011278 chr06:013011278 0 W/13011278-13011278 FN2385 SNP A -> G AC=1;AN=192;BQB=0.975594;DP=5064;DP4=2299,2524,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197472;MQB=1.58179e-08;MQSB=0.885319;RPB=0.430829;SGB=50.4731;VDB=0.151918;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.6:13014862 chr06:013014862 0 W/13014862-13014862 FN708-S Single Base Substitution A-G INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1032-S.SNP.6:13015350 chr06:013015350 0 W/13015350-13015350 FN1032-S Single Base Substitution G-A INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2438.SNP.6:13015442 chr06:013015442 0 W/13015442-13015442 FN2438 SNP T -> G AC=1;AN=200;BQB=0.533168;DP=4946;DP4=2400,2220,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.59607e-20;MQSB=0.960881;RPB=0.588617;SGB=68.5625;VDB=0.189455;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.6:13016460 chr06:013016460 0 W/13016460-13016460 FN708-S Single Base Substitution A-G INTERGENIC HOMO SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2283.SNP.6:13019239 chr06:013019239 0 W/13019239-13019239 FN2283 SNP G -> C AC=2;AN=192;BQB=0.94815;DP=5012;DP4=2387,2319,40,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.15364e-35;MQSB=0.913624;RPB=0.521878;SGB=225.126;VDB=0.0995087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.6:13021532 chr06:013021532 0 W/13021532-13021532 FN1288-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g22400 expressed protein SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN512-S.SNP.6:13025327 chr06:013025327 0 W/13025327-13025327 FN512-S Single Base Substitution C-T INTERGENIC HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2707-S.SNP.6:13036320 chr06:013036320 0 W/13036320-13036320 FN2707-S SNP T -> A AC=1;AN=200;BQB=0.97186;DP=4648;DP4=2334,2094,11,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0165663;MQB=0.000466866;MQSB=0.726769;RPB=0.949332;SGB=47.4799;VDB=0.0216742;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M377K|1109|LOC_Os06g22430|protein_coding|CODING|LOC_Os06g22430.1|3|1) FN3627-S.SNP.6:13039272 chr06:013039272 0 W/13039272-13039272 FN3627-S SNP G -> T AC=1;AN=190;BQB=0.999908;DP=1761;DP4=1088,562,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12408e-05;MQSB=0.999897;RPB=0.942949;SGB=39.9877;VDB=0.18288;EFF=INTRON(MODIFIER||||1109|LOC_Os06g22430|protein_coding|CODING|LOC_Os06g22430.1|3|1) FN453-S.SNP.6:13040665 chr06:013040665 0 W/13040665-13040665 FN453-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g22430 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-83.SNP.6:13041910 chr06:013041910 0 W/13041910-13041910 FN-83 Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1053-S.SNP.6:13042439 chr06:013042439 0 W/13042439-13042439 FN1053-S Single Base Substitution A-T INTRON HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1614-S.SNP.6:13061083 chr06:013061083 0 W/13061083-13061083 FN1614-S Single Base Substitution A-G INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2667-S.SNP.6:13062251 chr06:013062251 0 W/13062251-13062251 FN2667-S SNP C -> T AC=1;AN=200;BQB=0.777066;DP=4694;DP4=2549,1892,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36436e-16;MQSB=0.873631;RPB=0.486635;SGB=114.132;VDB=0.270952;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.6:13063112 chr06:013063112 0 W/13063112-13063112 FN1162-S Single Base Substitution T-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1162-S.SNP.6:13063113 chr06:013063113 0 W/13063113-13063113 FN1162-S Single Base Substitution G-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN4088-S.SNP.6:13064621 chr06:013064621 0 W/13064621-13064621 FN4088-S SNP C -> T AC=1;AN=182;BQB=0.940153;DP=2992;DP4=1546,1374,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.53808e-09;MQSB=0.696907;RPB=0.624198;SGB=66.6657;VDB=0.728077;EFF=INTRON(MODIFIER||||653|LOC_Os06g22480|protein_coding|CODING|LOC_Os06g22480.1|1|1) FN3914-S.SNP.6:13066965 chr06:013066965 0 W/13066965-13066965 FN3914-S SNP T -> A AC=1;AN=158;BQB=0.997055;DP=2259;DP4=1036,1098,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.8599e-07;MQSB=0.99592;RPB=0.489955;SGB=23.9652;VDB=0.240286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L615M|653|LOC_Os06g22480|protein_coding|CODING|LOC_Os06g22480.1|8|1) FN438-S.SNP.6:13082508 chr06:013082508 0 W/13082508-13082508 FN438-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2767-S.SNP.6:13082932 chr06:013082932 0 W/13082932-13082932 FN2767-S SNP A -> T AC=1;AN=198;BQB=0.635724;DP=4401;DP4=2115,2085,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43541e-14;MQSB=0.929487;RPB=0.830761;SGB=109.285;VDB=0.104393;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.6:13083044 chr06:013083044 0 W/13083044-13083044 FN1619-S Single Base Substitution A-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1738-S.SNP.6:13084188 chr06:013084188 0 W/13084188-13084188 FN1738-S SNP G -> A AC=1;AN=188;BQB=0.599254;DP=3239;DP4=1582,1602,19,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10093e-14;MQSB=0.59997;RPB=0.995584;SGB=-197.91;VDB=0.989791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1551L|1831|LOC_Os06g22520|protein_coding|CODING|LOC_Os06g22520.1|8|1) FN4135-S.SNP.6:13087379 chr06:013087379 0 W/13087379-13087379 FN4135-S SNP C -> A AC=1;AN=182;BQB=0.885797;DP=3006;DP4=1522,1413,12,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.42075e-09;MQSB=0.985346;RPB=0.604049;SGB=75.6874;VDB=0.209288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q684H|1831|LOC_Os06g22520|protein_coding|CODING|LOC_Os06g22520.1|5|1) FN3809-S.SNP.6:13093928 chr06:013093928 0 W/13093928-13093928 FN3809-S SNP C -> T AC=1;AN=190;BQB=0.919665;DP=2566;DP4=1213,1280,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.92659e-05;MQSB=0.966032;RPB=0.152285;SGB=26.3271;VDB=0.337266;EFF=INTERGENIC(MODIFIER||||||||||1) FN981-S.SNP.6:13104872 chr06:013104872 0 W/13104872-13104872 FN981-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN541-S.SNP.6:13109544 chr06:013109544 0 W/13109544-13109544 FN541-S Single Base Substitution T-C INTRON HOMO SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN479-S.SNP.6:13113354 chr06:013113354 0 W/13113354-13113354 FN479-S Single Base Substitution G-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN772-S.SNP.6:13119136 chr06:013119136 0 W/13119136-13119136 FN772-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g22560 formyl transferase, putative, expressed SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2345.SNP.6:13120571 chr06:013120571 0 W/13120571-13120571 FN2345 SNP C -> T AC=1;AN=192;BQB=0.0123262;DP=5051;DP4=2402,2364,18,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.48232e-18;MQSB=0.93684;RPB=0.484658;SGB=125.324;VDB=0.175298;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.6:13121216 chr06:013121216 0 W/13121216-13121216 FN620-S Single Base Substitution T-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN_830-6-1.SNP.6:13126571 chr06:013126571 0 W/13126571-13126571 FN_830-6-1 Single Base Substitution C-G Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN-407.SNP.6:13134429 chr06:013134429 0 W/13134429-13134429 FN-407 Single Base Substitution G-A INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1065-S.SNP.6:13134429 chr06:013134429 0 W/13134429-13134429 FN1065-S Single Base Substitution G-A INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2499.SNP.6:13134429 chr06:013134429 0 W/13134429-13134429 FN2499 SNP G -> A AC=2;AN=200;BQB=0.833928;DP=4548;DP4=2056,2199,16,17;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00967458;MQB=0.000147649;MQSB=0.73284;RPB=0.781271;SGB=33.5675;VDB=0.407795;EFF=INTERGENIC(MODIFIER||||||||||1) FN407-S.SNP.6:13134429 chr06:013134429 0 W/13134429-13134429 FN407-S Single Base Substitution G-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1025-S.SNP.6:13136044 chr06:013136044 0 W/13136044-13136044 FN1025-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g22580 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3353-S.SNP.6:13136836 chr06:013136836 0 W/13136836-13136836 FN3353-S SNP C -> T AC=2;AN=184;BQB=0.971785;DP=3439;DP4=1690,1604,17,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000290782;MQB=4.20867e-22;MQSB=0.724099;RPB=0.999107;SGB=88.8416;VDB=0.473431;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.6:13137316 chr06:013137316 0 W/13137316-13137316 FN445-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-166.SNP.6:13138894 chr06:013138894 0 W/13138894-13138894 FN-166 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g22590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN524-S.SNP.6:13141259 chr06:013141259 0 W/13141259-13141259 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2247-S.SNP.6:13150890 chr06:013150890 0 W/13150890-13150890 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.987077;DP=4076;DP4=1761,1896,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70607e-10;MQSB=0.0690962;RPB=0.867579;SGB=18.096;VDB=0.881079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.6:13155201 chr06:013155201 0 W/13155201-13155201 FN2441 SNP G -> A AC=1;AN=200;BQB=0.974436;DP=3012;DP4=1319,1388,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38677e-15;MQSB=0.655729;RPB=0.941674;SGB=94.3471;VDB=0.206858;EFF=INTERGENIC(MODIFIER||||||||||1) FN995-S.SNP.6:13157022 chr06:013157022 0 W/13157022-13157022 FN995-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN995-S.SNP.6:13157023 chr06:013157023 0 W/13157023-13157023 FN995-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g22630 retrotransposon protein, putative, Ty1-copia subclass SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN2407.SNP.6:13158505 chr06:013158505 0 W/13158505-13158505 FN2407 SNP A -> G AC=1;AN=200;BQB=0.536815;DP=4812;DP4=2269,2255,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.90978e-14;MQSB=0.854894;RPB=0.840003;SGB=83.5316;VDB=0.588829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.6:13176802 chr06:013176802 0 W/13176802-13176802 FN1278-S Single Base Substitution C-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN-53.SNP.6:13181040 chr06:013181040 0 W/13181040-13181040 FN-53 Single Base Substitution C-G INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN448-S.SNP.6:13187539 chr06:013187539 0 W/13187539-13187539 FN448-S Single Base Substitution A-G INTRON HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3595-S.SNP.6:13187920 chr06:013187920 0 W/13187920-13187920 FN3595-S SNP A -> T AC=1;AN=190;BQB=0.988932;DP=3253;DP4=1481,1667,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.2794e-07;MQSB=0.995493;RPB=0.999908;SGB=25.439;VDB=0.713138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S89T|518|LOC_Os06g22670|protein_coding|CODING|LOC_Os06g22670.1|2|1) FN3595-S.SNP.6:13187921 chr06:013187921 0 W/13187921-13187921 FN3595-S SNP A -> T AC=1;AN=190;BQB=0.842823;DP=3272;DP4=1472,1677,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27574e-07;MQSB=0.990717;RPB=0.996283;SGB=1.00336;VDB=0.365827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N88K|518|LOC_Os06g22670|protein_coding|CODING|LOC_Os06g22670.1|2|1) FN3426-S.SNP.6:13196751 chr06:013196751 0 W/13196751-13196751 FN3426-S SNP C -> A AC=1;AN=184;BQB=0.91321;DP=2743;DP4=1311,1364,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.51449e-05;MQSB=0.924445;RPB=0.89757;SGB=35.1773;VDB=0.375148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L109F|131|LOC_Os06g22690|protein_coding|CODING|LOC_Os06g22690.1|4|1) FN3600-S.SNP.6:13197621 chr06:013197621 0 W/13197621-13197621 FN3600-S SNP G -> A AC=2;AN=190;BQB=0.817439;DP=3036;DP4=1558,1320,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.3031e-13;MQSB=0.942685;RPB=0.896021;SGB=103.742;VDB=0.89541;EFF=INTRON(MODIFIER||||131|LOC_Os06g22690|protein_coding|CODING|LOC_Os06g22690.1|2|1) FN485-S.SNP.6:13197621 chr06:013197621 0 W/13197621-13197621 FN485-S Single Base Substitution G-A INTRON HOMO SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN623-S.SNP.6:13197621 chr06:013197621 0 W/13197621-13197621 FN623-S Single Base Substitution G-A INTRON HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2331.SNP.6:13207281 chr06:013207281 0 W/13207281-13207281 FN2331 SNP C -> A AC=1;AN=192;BQB=0.937627;DP=4660;DP4=2303,2066,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0684549;MQB=0.760406;MQSB=3.78499e-31;RPB=0.839318;SGB=-11.9469;VDB=0.0677759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P195Q|1344|LOC_Os06g22710|protein_coding|CODING|LOC_Os06g22710.1|1|1) FN1099-S.SNP.6:13219431 chr06:013219431 0 W/13219431-13219431 FN1099-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g22730 retrotransposon protein, putative, unclassified, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN813-S.SNP.6:13220265 chr06:013220265 0 W/13220265-13220265 FN813-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g22730 retrotransposon protein, putative, unclassified, expressed SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN690-S.SNP.6:13221963 chr06:013221963 0 W/13221963-13221963 FN690-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g22730 retrotransposon protein, putative, unclassified, expressed SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3472-S.SNP.6:13224588 chr06:013224588 0 W/13224588-13224588 FN3472-S SNP G -> A AC=1;AN=184;BQB=0.975711;DP=4207;DP4=1962,1880,192,28;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.432137;MQB=0.056809;MQSB=0;RPB=0.734725;SGB=-2754.48;VDB=0.158811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.6:13226044 chr06:013226044 0 W/13226044-13226044 FN3476-S SNP A -> G AC=2;AN=182;BQB=0.96663;DP=3608;DP4=1508,1618,17,24;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0.00748337;MQB=2.31906e-07;MQSB=0.00679966;RPB=0.526833;SGB=-229.773;VDB=0.13663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.6:13234457 chr06:013234457 0 W/13234457-13234457 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.656007;DP=4873;DP4=2241,2362,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.04375e-16;MQSB=0.734797;RPB=0.385812;SGB=92.9626;VDB=0.65951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.6:13234703 chr06:013234703 0 W/13234703-13234703 FN2488 SNP C -> G AC=2;AN=200;BQB=0.939329;DP=4233;DP4=2060,1931,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.79381e-21;MQSB=0.977202;RPB=0.282116;SGB=126.794;VDB=0.401547;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.6:13245130 chr06:013245130 0 W/13245130-13245130 FN-166 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g22760 OsMADS71 - MADS-box family gene with M-alpha type-box, expressed SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3677-S.SNP.6:13245580 chr06:013245580 0 W/13245580-13245580 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.98921;DP=2766;DP4=1213,1451,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15876e-08;MQSB=0.999812;RPB=0.580705;SGB=36.1006;VDB=0.424341;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S224L|238|LOC_Os06g22760|protein_coding|CODING|LOC_Os06g22760.1|1|1) FN1389-S.SNP.6:13246105 chr06:013246105 0 W/13246105-13246105 FN1389-S Single Base Substitution A-G INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1288-S.SNP.6:13246842 chr06:013246842 0 W/13246842-13246842 FN1288-S Single Base Substitution A-G INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN2689-S.SNP.6:13256328 chr06:013256328 0 W/13256328-13256328 FN2689-S SNP A -> G AC=1;AN=200;BQB=0.656624;DP=4988;DP4=2269,2403,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.95579e-14;MQSB=0.991138;RPB=0.963368;SGB=69.1109;VDB=0.307502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3758-S.SNP.6:13256873 chr06:013256873 0 W/13256873-13256873 FN3758-S SNP G -> A AC=1;AN=190;BQB=0.998843;DP=2393;DP4=1196,1125,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10092e-09;MQSB=0.965958;RPB=0.638948;SGB=39.6545;VDB=0.481346;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.6:13261018 chr06:013261018 0 W/13261018-13261018 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.993685;DP=3572;DP4=1659,1771,14,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60098e-14;MQSB=0.993716;RPB=0.383372;SGB=85.0529;VDB=0.384692;EFF=INTRON(MODIFIER||||1209|LOC_Os06g22770|protein_coding|CODING|LOC_Os06g22770.1|5|1) FN3872-S.SNP.6:13263422 chr06:013263422 0 W/13263422-13263422 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.985475;DP=2561;DP4=1267,1192,3,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.45933e-11;MQSB=0.950903;RPB=0.80433;SGB=47.5512;VDB=0.77197;EFF=INTRON(MODIFIER||||185|LOC_Os06g22780|protein_coding|CODING|LOC_Os06g22780.1|1|1) FN1505-S.SNP.6:13265201 chr06:013265201 0 W/13265201-13265201 FN1505-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3355-S.SNP.6:13266138 chr06:013266138 0 W/13266138-13266138 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.992091;DP=2809;DP4=1426,1274,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.24092e-07;MQSB=0.966687;RPB=0.998771;SGB=28.7043;VDB=0.437445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L103F|579|LOC_Os06g22790|protein_coding|CODING|LOC_Os06g22790.1|2|1) FN2337.SNP.6:13267041 chr06:013267041 0 W/13267041-13267041 FN2337 SNP C -> A AC=1;AN=192;BQB=0.852998;DP=4506;DP4=2085,1985,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.36966e-12;MQSB=0.798732;RPB=0.250912;SGB=22.9983;VDB=0.190491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.6:13275162 chr06:013275162 0 W/13275162-13275162 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.463317;DP=4915;DP4=2769,1970,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.98772e-10;MQSB=0.912257;RPB=0.149635;SGB=47.4799;VDB=0.0849445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.6:13277261 chr06:013277261 0 W/13277261-13277261 FN2237-S SNP T -> C AC=1;AN=190;BQB=0.432496;DP=4997;DP4=2154,2413,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000608804;MQSB=0.747213;RPB=0.487395;SGB=-5.21201;VDB=0.590673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.6:13287525 chr06:013287525 0 W/13287525-13287525 FN3287-S SNP C -> G AC=1;AN=184;BQB=0.947521;DP=3104;DP4=1659,1342,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.98477e-08;MQSB=0.797721;RPB=0.437804;SGB=32.2261;VDB=0.0275085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.6:13288416 chr06:013288416 0 W/13288416-13288416 FN1028-S Single Base Substitution A-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2753-S.SNP.6:13295840 chr06:013295840 0 W/13295840-13295840 FN2753-S SNP T -> A AC=2;AN=200;BQB=0.676736;DP=5169;DP4=2393,2537,29,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.87569e-37;MQSB=0.997714;RPB=0.809283;SGB=279.918;VDB=0.00119018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.6:13307719 chr06:013307719 0 W/13307719-13307719 FN-370 Single Base Substitution T-C INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN486-S.SNP.6:13308438 chr06:013308438 0 W/13308438-13308438 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN486-S.SNP.6:13308439 chr06:013308439 0 W/13308439-13308439 FN486-S Single Base Substitution G-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN499-S.SNP.6:13315232 chr06:013315232 0 W/13315232-13315232 FN499-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-175.SNP.6:13315437 chr06:013315437 0 W/13315437-13315437 FN-175 Single Base Substitution C-A INTRON HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN824-S.SNP.6:13335360 chr06:013335360 0 W/13335360-13335360 FN824-S Single Base Substitution G-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN-361.SNP.6:13338408 chr06:013338408 0 W/13338408-13338408 FN-361 Single Base Substitution C-T INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN_826-4-1.SNP.6:13338408 chr06:013338408 0 W/13338408-13338408 FN_826-4-1 Single Base Substitution C-T Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN1030-S.SNP.6:13370862 chr06:013370862 0 W/13370862-13370862 FN1030-S Single Base Substitution T-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN-109.SNP.6:13394392 chr06:013394392 0 W/13394392-13394392 FN-109 Single Base Substitution T-C INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN2797-S.SNP.6:13397345 chr06:013397345 0 W/13397345-13397345 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.994588;DP=3629;DP4=1392,2047,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000551116;MQB=6.51142e-07;MQSB=0.0119004;RPB=0.14475;SGB=43.7442;VDB=0.505717;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.6:13405425 chr06:013405425 0 W/13405425-13405425 FN-95 Single Base Substitution G-A INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-81.SNP.6:13406267 chr06:013406267 0 W/13406267-13406267 FN-81 Single Base Substitution A-T INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN2279-S.SNP.6:13416046 chr06:013416046 0 W/13416046-13416046 FN2279-S SNP G -> C AC=1;AN=190;BQB=0.755756;DP=3939;DP4=1718,1815,18,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41755e-21;MQSB=0.933888;RPB=0.498576;SGB=172.05;VDB=0.361001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G397R|1012|LOC_Os06g22980|protein_coding|CODING|LOC_Os06g22980.1|1|1) FN1488-S.SNP.6:13420714 chr06:013420714 0 W/13420714-13420714 FN1488-S Single Base Substitution C-T INTRON HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1565-S.SNP.6:13421983 chr06:013421983 0 W/13421983-13421983 FN1565-S Single Base Substitution C-T INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN-98.SNP.6:13425171 chr06:013425171 0 W/13425171-13425171 FN-98 Single Base Substitution C-T INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN465-S.SNP.6:13426923 chr06:013426923 0 W/13426923-13426923 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1639-S.SNP.6:13432528 chr06:013432528 0 W/13432528-13432528 FN1639-S Single Base Substitution A-G INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN-61.SNP.6:13443804 chr06:013443804 0 W/13443804-13443804 FN-61 Single Base Substitution T-C INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3364-S.SNP.6:13451574 chr06:013451574 0 W/13451574-13451574 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.722307;DP=3404;DP4=1684,1572,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.9148e-07;MQSB=0.922681;RPB=0.809038;SGB=5.28054;VDB=0.448638;EFF=INTRON(MODIFIER||||1153|LOC_Os06g23070|protein_coding|CODING|LOC_Os06g23070.1|4|1) FN747-S.SNP.6:13451574 chr06:013451574 0 W/13451574-13451574 FN747-S Single Base Substitution C-T INTRON HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN919-S.SNP.6:13451574 chr06:013451574 0 W/13451574-13451574 FN919-S Single Base Substitution C-T INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2553-S.SNP.6:13453245 chr06:013453245 0 W/13453245-13453245 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.92938;DP=3875;DP4=1856,1831,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.86876e-08;MQSB=0.968777;RPB=0.585925;SGB=36.5539;VDB=0.506326;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1104K|1153|LOC_Os06g23070|protein_coding|CODING|LOC_Os06g23070.1|6|1) FN1241-S.SNP.6:13461593 chr06:013461593 0 W/13461593-13461593 FN1241-S Single Base Substitution C-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1241-S.SNP.6:13461598 chr06:013461598 0 W/13461598-13461598 FN1241-S Single Base Substitution G-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN4221-S.SNP.6:13468531 chr06:013468531 0 W/13468531-13468531 FN4221-S SNP A -> G AC=1;AN=170;BQB=0.837531;DP=2565;DP4=1173,1102,5,20;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=8.03191e-08;MQSB=3.40551e-09;RPB=0.953152;SGB=-70.9939;VDB=0.91404;EFF=INTRON(MODIFIER||||363|LOC_Os06g23090|protein_coding|CODING|LOC_Os06g23090.1|3|1) FN3917-S.SNP.6:13470711 chr06:013470711 0 W/13470711-13470711 FN3917-S SNP A -> C AC=1;AN=158;BQB=0.973584;DP=2118;DP4=997,1054,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000111815;MQSB=0.742177;RPB=0.690628;SGB=20.5959;VDB=0.170099;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.6:13477882 chr06:013477882 0 W/13477882-13477882 FN4051-S SNP T -> C AC=1;AN=168;BQB=0.99993;DP=2205;DP4=1201,916,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000453515;MQB=9.73235e-11;MQSB=0.922605;RPB=0.968536;SGB=58.7637;VDB=0.179355;EFF=INTRON(MODIFIER||||698|LOC_Os06g23114|protein_coding|CODING|LOC_Os06g23114.1|1|1) FN322-S.SNP.6:13483887 chr06:013483887 0 W/13483887-13483887 FN322-S Single Base Substitution T-A INTRON HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN-143.SNP.6:13492022 chr06:013492022 0 W/13492022-13492022 FN-143 Single Base Substitution T-A INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3398-S.SNP.6:13493145 chr06:013493145 0 W/13493145-13493145 FN3398-S SNP A -> G AC=1;AN=184;BQB=0.930223;DP=2700;DP4=1340,1274,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38241e-05;MQSB=0.953902;RPB=0.45093;SGB=10.6662;VDB=0.637028;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.6:13494857 chr06:013494857 0 W/13494857-13494857 FN-344 Single Base Substitution C-T INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN4073-S.SNP.6:13495928 chr06:013495928 0 W/13495928-13495928 FN4073-S SNP G -> T AC=2;AN=180;BQB=0.798854;DP=2620;DP4=1123,1415,10,12;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=9.55367e-11;MQSB=0.9717;RPB=0.97965;SGB=93.7308;VDB=0.417452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.6:13498842 chr06:013498842 0 W/13498842-13498842 FN1414-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1346-S.SNP.6:13500136 chr06:013500136 0 W/13500136-13500136 FN1346-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g23140 copper methylamine oxidase precursor, putative, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN4073-S.SNP.6:13502051 chr06:013502051 0 W/13502051-13502051 FN4073-S SNP A -> C AC=2;AN=182;BQB=0.986595;DP=2731;DP4=1072,1535,7,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.15083e-11;MQSB=0.326653;RPB=0.630088;SGB=80.1982;VDB=0.719255;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.6:13503652 chr06:013503652 0 W/13503652-13503652 FN3757-S SNP C -> G AC=1;AN=190;BQB=0.542616;DP=2714;DP4=1420,1176,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07659e-08;MQSB=0.977754;RPB=0.648218;SGB=21.1058;VDB=0.817546;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.6:13508599 chr06:013508599 0 W/13508599-13508599 FN4073-S SNP C -> G AC=2;AN=182;BQB=0.997932;DP=2154;DP4=1688,398,13,1;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.46917e-08;MQSB=1.02296e-05;RPB=0.668994;SGB=57.644;VDB=0.794434;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.6:13509665 chr06:013509665 0 W/13509665-13509665 FN-154 Single Base Substitution T-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN534-S.SNP.6:13509665 chr06:013509665 0 W/13509665-13509665 FN534-S Single Base Substitution T-G INTERGENIC HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN-70.SNP.6:13525600 chr06:013525600 0 W/13525600-13525600 FN-70 Single Base Substitution C-T INTRON HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN796-S.SNP.6:13525600 chr06:013525600 0 W/13525600-13525600 FN796-S Single Base Substitution C-T INTRON HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN3679-S.SNP.6:13528212 chr06:013528212 0 W/13528212-13528212 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.930042;DP=2967;DP4=1539,1328,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95922e-12;MQSB=0.985521;RPB=0.88436;SGB=71.6393;VDB=0.822953;EFF=INTRON(MODIFIER||||893|LOC_Os06g23170|protein_coding|CODING|LOC_Os06g23170.1|3|1) FN3727-S.SNP.6:13531885 chr06:013531885 0 W/13531885-13531885 FN3727-S SNP T -> C AC=1;AN=190;BQB=0.999922;DP=2937;DP4=1338,1453,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50631e-07;MQSB=0.986156;RPB=0.940661;SGB=15.9981;VDB=0.0649479;EFF=INTRON(MODIFIER||||893|LOC_Os06g23170|protein_coding|CODING|LOC_Os06g23170.1|9|1) FN_827-1.SNP.6:13535318 chr06:013535318 0 W/13535318-13535318 FN_827-1 Single Base Substitution G-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN426-S.SNP.6:13536118 chr06:013536118 0 W/13536118-13536118 FN426-S Single Base Substitution A-T INTERGENIC HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN451-S.SNP.6:13542075 chr06:013542075 0 W/13542075-13542075 FN451-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g23190 receptor-like protein kinase 5 precursor, putative, expressed SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN451-S.SNP.6:13542076 chr06:013542076 0 W/13542076-13542076 FN451-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g23190 receptor-like protein kinase 5 precursor, putative, expressed SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2263-S.SNP.6:13547225 chr06:013547225 0 W/13547225-13547225 FN2263-S SNP G -> A AC=1;AN=190;BQB=0.620251;DP=3952;DP4=1830,1806,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43112e-17;MQSB=0.510056;RPB=0.301866;SGB=30.527;VDB=0.772966;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.6:13547676 chr06:013547676 0 W/13547676-13547676 FN931-S Single Base Substitution C-T INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3944-S.SNP.6:13560490 chr06:013560490 0 W/13560490-13560490 FN3944-S SNP G -> A AC=2;AN=168;BQB=0.896713;DP=3152;DP4=1397,1655,8,7;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0504442;MQB=0.995131;MQSB=1.68702e-18;RPB=0.998563;SGB=61.0344;VDB=0.19958;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L1289|1509|LOC_Os06g23230|protein_coding|CODING|LOC_Os06g23230.1|10|1) FN2608-S.SNP.6:13568548 chr06:013568548 0 W/13568548-13568548 FN2608-S SNP G -> A AC=2;AN=198;BQB=0.858776;DP=4326;DP4=2084,2056,7,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.55694e-10;MQSB=0.994265;RPB=0.57944;SGB=29.3443;VDB=0.634608;EFF=INTRON(MODIFIER||||234|LOC_Os06g23240|protein_coding|CODING|LOC_Os06g23240.1|2|1) FN3827-S.SNP.6:13569157 chr06:013569157 0 W/13569157-13569157 FN3827-S SNP C -> G AC=1;AN=190;BQB=0.999172;DP=2874;DP4=1349,1419,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.60521e-09;MQSB=0.997777;RPB=0.0178913;SGB=46.7622;VDB=0.021209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q68E|234|LOC_Os06g23240|protein_coding|CODING|LOC_Os06g23240.1|3|1) FN2436.SNP.6:13570764 chr06:013570764 0 W/13570764-13570764 FN2436 SNP C -> T AC=1;AN=200;BQB=0.92086;DP=4246;DP4=1662,2272,8,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235516;MQB=7.31154e-12;MQSB=0.970852;RPB=0.620467;SGB=-8.26887;VDB=0.417118;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.6:13571314 chr06:013571314 0 W/13571314-13571314 FN548-S Single Base Substitution T-C INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN548-S.SNP.6:13571317 chr06:013571317 0 W/13571317-13571317 FN548-S Single Base Substitution A-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN_935-1.SNP.6:13571533 chr06:013571533 0 W/13571533-13571533 FN_935-1 Single Base Substitution A-G HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN1443-S.SNP.6:13573246 chr06:013573246 0 W/13573246-13573246 FN1443-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g23250 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1702-S.SNP.6:13575565 chr06:013575565 0 W/13575565-13575565 FN1702-S SNP G -> A AC=1;AN=188;BQB=0.114035;DP=3988;DP4=2242,1709,17,7;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.0947844;MQB=0.999751;MQSB=0.122519;RPB=0.179251;SGB=-39.1914;VDB=0.788069;EFF=INTRON(MODIFIER||||1135|LOC_Os06g23260|protein_coding|CODING|LOC_Os06g23260.1|8|1) FN3727-S.SNP.6:13578431 chr06:013578431 0 W/13578431-13578431 FN3727-S SNP A -> G AC=1;AN=190;BQB=0.998021;DP=3144;DP4=1534,1499,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00159033;MQB=1.86608e-07;MQSB=0.850698;RPB=0.891812;SGB=62.7569;VDB=0.108003;EFF=INTRON(MODIFIER||||1135|LOC_Os06g23260|protein_coding|CODING|LOC_Os06g23260.1|6|1) FN3945-S.SNP.6:13579431 chr06:013579431 0 W/13579431-13579431 FN3945-S SNP G -> A AC=1;AN=168;BQB=0.855668;DP=2566;DP4=1176,1260,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0155885;MQB=0.0317601;MQSB=0.990722;RPB=0.974427;SGB=45.0404;VDB=0.0892511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S495F|1135|LOC_Os06g23260|protein_coding|CODING|LOC_Os06g23260.1|5|1) FN400-S.SNP.6:13582910 chr06:013582910 0 W/13582910-13582910 FN400-S Single Base Substitution A-G INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1380-S.SNP.6:13587004 chr06:013587004 0 W/13587004-13587004 FN1380-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2401.SNP.6:13595830 chr06:013595830 0 W/13595830-13595830 FN2401 SNP T -> G AC=1;AN=200;BQB=0.519354;DP=3523;DP4=1513,1672,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000283849;MQB=4.95471e-11;MQSB=0.0855457;RPB=0.662754;SGB=58.2954;VDB=0.261067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.6:13596907 chr06:013596907 0 W/13596907-13596907 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.934138;DP=4047;DP4=1942,1939,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43194e-11;MQSB=0.912618;RPB=0.889305;SGB=61.7198;VDB=0.801298;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.6:13602806 chr06:013602806 0 W/13602806-13602806 FN418-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g23290 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_N1-151-1.SNP.6:13606853 chr06:013606853 0 W/13606853-13606853 FN_N1-151-1 Single Base Substitution T-C INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN2681-S.SNP.6:13610901 chr06:013610901 0 W/13610901-13610901 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.138735;DP=4267;DP4=2379,1689,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19265e-14;MQSB=0.966344;RPB=0.764859;SGB=94.3471;VDB=0.909774;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.6:13617497 chr06:013617497 0 W/13617497-13617497 FN1280-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1444-S.SNP.6:13627872 chr06:013627872 0 W/13627872-13627872 FN1444-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g23340 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1022-S.SNP.6:13641156 chr06:013641156 0 W/13641156-13641156 FN1022-S Single Base Substitution A-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN801-S.SNP.6:13652245 chr06:013652245 0 W/13652245-13652245 FN801-S Single Base Substitution A-T INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1617-S.SNP.6:13653659 chr06:013653659 0 W/13653659-13653659 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3912-S.SNP.6:13659469 chr06:013659469 0 W/13659469-13659469 FN3912-S SNP T -> A AC=1;AN=158;BQB=0.999616;DP=2243;DP4=1150,993,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.5272e-07;MQSB=0.964197;RPB=0.99999;SGB=51.4366;VDB=0.808177;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.6:13660834 chr06:013660834 0 W/13660834-13660834 FN_788-1-1 Single Base Substitution A-G HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2441.SNP.6:13662313 chr06:013662313 0 W/13662313-13662313 FN2441 SNP G -> T AC=1;AN=200;BQB=0.0739742;DP=3880;DP4=2004,1635,19,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50136e-18;MQSB=0.999719;RPB=0.740545;SGB=119.583;VDB=0.346101;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.6:13665621 chr06:013665621 0 W/13665621-13665621 FN764-S Single Base Substitution C-T INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN963-S.SNP.6:13685791 chr06:013685791 0 W/13685791-13685791 FN963-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN963-S.SNP.6:13685792 chr06:013685792 0 W/13685792-13685792 FN963-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g23440 eukaryotic translation initiation factor 1A, putative, expressed SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2566-S.SNP.6:13701372 chr06:013701372 0 W/13701372-13701372 FN2566-S SNP G -> A AC=1;AN=198;BQB=0.990418;DP=3768;DP4=1876,1672,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000275053;MQSB=0.780625;RPB=0.793657;SGB=18.5788;VDB=0.158094;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A101T|124|LOC_Os06g23480|protein_coding|CODING|LOC_Os06g23480.1|1|1) FN1423-S.SNP.6:13718718 chr06:013718718 0 W/13718718-13718718 FN1423-S Single Base Substitution T-C INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2117-S.SNP.6:13719329 chr06:013719329 0 W/13719329-13719329 FN2117-S SNP C -> A AC=1;AN=168;BQB=0.998738;DP=3470;DP4=1635,1795,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.28587e-07;MQSB=0.857888;RPB=0.643822;SGB=4.1907;VDB=0.915056;EFF=INTRON(MODIFIER||||398|LOC_Os06g23504|protein_coding|CODING|LOC_Os06g23504.2|6|1) FN2158-S.SNP.6:13733513 chr06:013733513 0 W/13733513-13733513 FN2158-S SNP C -> T AC=1;AN=168;BQB=0.000924416;DP=3996;DP4=2017,1940,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.24276e-08;MQSB=0.98956;RPB=0.0244843;SGB=-177.758;VDB=0.79947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.6:13735101 chr06:013735101 0 W/13735101-13735101 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.629163;DP=4552;DP4=1981,2383,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79712e-13;MQSB=0.996129;RPB=0.82353;SGB=91.1059;VDB=0.735687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.6:13737072 chr06:013737072 0 W/13737072-13737072 FN-257 Single Base Substitution C-G INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN751-S.SNP.6:13740531 chr06:013740531 0 W/13740531-13740531 FN751-S Single Base Substitution A-G INTERGENIC HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN1237-S.SNP.6:13754236 chr06:013754236 0 W/13754236-13754236 FN1237-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1764-S.SNP.6:13759496 chr06:013759496 0 W/13759496-13759496 FN1764-S SNP T -> A AC=1;AN=188;BQB=0.232522;DP=3443;DP4=1649,1744,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.88406e-08;MQSB=0.894955;RPB=0.781795;SGB=-36.9078;VDB=0.138258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.6:13773083 chr06:013773083 0 W/13773083-13773083 FN3598-S SNP G -> A AC=1;AN=188;BQB=0.426854;DP=3543;DP4=1547,1898,8,23;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00225797;MQB=1.72363e-16;MQSB=0.0582797;RPB=0.181756;SGB=-6.85034;VDB=0.00818839;EFF=INTRON(MODIFIER||||649|LOC_Os06g23610|protein_coding|CODING|LOC_Os06g23610.1|2|1) FN302-S.SNP.6:13778068 chr06:013778068 0 W/13778068-13778068 FN302-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g23630 transposon protein, putative, CACTA, En/Spm sub-class SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN539-S.SNP.6:13780594 chr06:013780594 0 W/13780594-13780594 FN539-S Single Base Substitution G-A INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN-42.SNP.6:13782336 chr06:013782336 0 W/13782336-13782336 FN-42 Single Base Substitution G-A INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3422-S.SNP.6:13784173 chr06:013784173 0 W/13784173-13784173 FN3422-S SNP C -> A AC=2;AN=184;BQB=0.813945;DP=2832;DP4=1357,1349,22,16;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0045904;MQB=9.18794e-06;MQSB=0.2899;RPB=0.936765;SGB=123.793;VDB=0.252966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.6:13787971 chr06:013787971 0 W/13787971-13787971 FN2326 SNP G -> C AC=1;AN=192;BQB=0.641672;DP=5089;DP4=2262,2412,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.13784e-08;MQSB=0.916592;RPB=0.97761;SGB=4.22611;VDB=0.104067;EFF=INTRON(MODIFIER||||124|LOC_Os06g23640|protein_coding|CODING|LOC_Os06g23640.1|2|1) FN1645-S.SNP.6:13793081 chr06:013793081 0 W/13793081-13793081 FN1645-S Single Base Substitution T-G INTERGENIC Homo SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN2486.SNP.6:13795930 chr06:013795930 0 W/13795930-13795930 FN2486 SNP G -> T AC=1;AN=200;BQB=0.798965;DP=4424;DP4=2017,2149,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9575e-06;MQSB=0.69942;RPB=0.0245054;SGB=49.6594;VDB=0.0827962;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.6:13800821 chr06:013800821 0 W/13800821-13800821 FN3394-S SNP A -> C AC=1;AN=184;BQB=0.856345;DP=2867;DP4=1281,1356,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.08601e-11;MQSB=0.748427;RPB=0.393274;SGB=-13.1487;VDB=0.415009;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.6:13803332 chr06:013803332 0 W/13803332-13803332 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3670-S.SNP.6:13803560 chr06:013803560 0 W/13803560-13803560 FN3670-S SNP T -> C AC=1;AN=190;BQB=0.988289;DP=1864;DP4=705,1038,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000536481;MQB=1.09962e-05;MQSB=5.05026e-05;RPB=0.968858;SGB=25.439;VDB=0.0421135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.6:13804382 chr06:013804382 0 W/13804382-13804382 FN2788-S SNP C -> G AC=1;AN=198;BQB=0.602423;DP=3827;DP4=1794,1801,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.97629e-16;MQSB=0.945892;RPB=0.375573;SGB=52.7004;VDB=0.71803;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V122|373|LOC_Os06g23650|protein_coding|CODING|LOC_Os06g23650.1|1|1) FN3457-S.SNP.6:13808006 chr06:013808006 0 W/13808006-13808006 FN3457-S SNP A -> T AC=1;AN=184;BQB=0.979008;DP=2765;DP4=1282,1384,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.04088e-07;MQSB=0.984025;RPB=0.245123;SGB=32.2261;VDB=0.0530937;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.6:13808253 chr06:013808253 0 W/13808253-13808253 FN3857-S SNP A -> T AC=1;AN=158;BQB=0.954319;DP=2474;DP4=1041,1271,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.13483e-08;MQSB=0.968698;RPB=0.645193;SGB=47.0672;VDB=0.899975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.6:13808254 chr06:013808254 0 W/13808254-13808254 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.809561;DP=2487;DP4=1067,1318,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.60792e-08;MQSB=0.994922;RPB=0.274193;SGB=44.1818;VDB=0.856455;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.6:13809580 chr06:013809580 0 W/13809580-13809580 FN526-S Single Base Substitution A-T INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3939-S.SNP.6:13809830 chr06:013809830 0 W/13809830-13809830 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.985189;DP=2350;DP4=902,1378,2,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.43098e-07;MQSB=0.868421;RPB=0.993897;SGB=47.0672;VDB=0.0158646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.6:13822768 chr06:013822768 0 W/13822768-13822768 FN-126 Single Base Substitution T-A INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1278-S.SNP.6:13827410 chr06:013827410 0 W/13827410-13827410 FN1278-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1262-S.SNP.6:13833746 chr06:013833746 0 W/13833746-13833746 FN1262-S Single Base Substitution A-C INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN4188-S.SNP.6:13843546 chr06:013843546 0 W/13843546-13843546 FN4188-S SNP T -> A AC=1;AN=170;BQB=0.614478;DP=2797;DP4=1392,1253,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.8192e-09;MQSB=0.999755;RPB=0.460744;SGB=32.0972;VDB=0.817288;EFF=INTRON(MODIFIER||||441|LOC_Os06g23684|protein_coding|CODING|LOC_Os06g23684.1|6|1) FN429-S.SNP.6:13847285 chr06:013847285 0 W/13847285-13847285 FN429-S Single Base Substitution T-C INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2645-S.SNP.6:13847960 chr06:013847960 0 W/13847960-13847960 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.674948;DP=5086;DP4=2508,2340,15,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00845458;MQB=0.00164499;MQSB=0.987661;RPB=0.943408;SGB=137.158;VDB=0.475242;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.6:13854869 chr06:013854869 0 W/13854869-13854869 FN2380 SNP C -> A AC=2;AN=192;BQB=0.808212;DP=4728;DP4=2216,2180,21,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000211506;MQB=3.76481e-20;MQSB=0.999989;RPB=0.158745;SGB=111.067;VDB=0.0667387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.6:13855008 chr06:013855008 0 W/13855008-13855008 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.963302;DP=2934;DP4=1496,1325,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58812e-12;MQSB=0.963424;RPB=0.96565;SGB=43.4494;VDB=0.138303;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T149|189|LOC_Os06g23710|protein_coding|CODING|LOC_Os06g23710.1|4|1) FN3541-S.SNP.6:13856540 chr06:013856540 0 W/13856540-13856540 FN3541-S SNP T -> G AC=2;AN=188;BQB=0.482589;DP=2669;DP4=1216,1389,10,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.73858e-10;MQSB=0.992526;RPB=0.940548;SGB=71.4172;VDB=0.90518;EFF=INTRON(MODIFIER||||189|LOC_Os06g23710|protein_coding|CODING|LOC_Os06g23710.1|3|1) FN448-S.SNP.6:13856540 chr06:013856540 0 W/13856540-13856540 FN448-S Single Base Substitution T-G INTRON HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2540-S.SNP.6:13857441 chr06:013857441 0 W/13857441-13857441 FN2540-S SNP T -> C AC=1;AN=198;BQB=0.600398;DP=4195;DP4=2287,1710,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.27024e-12;MQSB=0.116991;RPB=0.991636;SGB=58.1246;VDB=0.800677;EFF=INTRON(MODIFIER||||189|LOC_Os06g23710|protein_coding|CODING|LOC_Os06g23710.1|3|1) FN2540-S.SNP.6:13857442 chr06:013857442 0 W/13857442-13857442 FN2540-S SNP T -> A AC=1;AN=198;BQB=0.995219;DP=4170;DP4=2281,1703,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.3479e-10;MQSB=0.076123;RPB=0.977673;SGB=58.1246;VDB=0.902681;EFF=INTRON(MODIFIER||||189|LOC_Os06g23710|protein_coding|CODING|LOC_Os06g23710.1|3|1) FN4325-S.SNP.6:13863408 chr06:013863408 0 W/13863408-13863408 FN4325-S SNP C -> T AC=1;AN=170;BQB=0.996836;DP=2628;DP4=1254,1291,5,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00342466;MQB=2.34297e-09;MQSB=0.596192;RPB=0.675625;SGB=70.0854;VDB=0.287478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A136T|163|LOC_Os06g23720|protein_coding|CODING|LOC_Os06g23720.1|3|1) FN3416-S.SNP.6:13864652 chr06:013864652 0 W/13864652-13864652 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.992237;DP=2990;DP4=1453,1445,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.676e-09;MQSB=0.997894;RPB=0.92173;SGB=46.3132;VDB=0.325278;EFF=INTRON(MODIFIER||||163|LOC_Os06g23720|protein_coding|CODING|LOC_Os06g23720.1|1|1) FN2589-S.SNP.6:13864731 chr06:013864731 0 W/13864731-13864731 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.733872;DP=4202;DP4=2049,1952,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05108e-07;MQSB=0.752125;RPB=0.996663;SGB=40.149;VDB=0.412929;EFF=INTRON(MODIFIER||||163|LOC_Os06g23720|protein_coding|CODING|LOC_Os06g23720.1|1|1) FN244-S.SNP.6:13868968 chr06:013868968 0 W/13868968-13868968 FN244-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g23730 retrotransposon, putative, centromere-specific SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2330.SNP.6:13869928 chr06:013869928 0 W/13869928-13869928 FN2330 SNP C -> G AC=2;AN=192;BQB=0.69197;DP=4649;DP4=2277,2164,19,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.09335e-17;MQSB=0.950061;RPB=0.928318;SGB=-5.7391;VDB=0.444903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.6:13872478 chr06:013872478 0 W/13872478-13872478 FN3740-S SNP T -> G AC=2;AN=190;BQB=0.976675;DP=2797;DP4=1316,1368,16,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.61044e-15;MQSB=0.989086;RPB=0.983623;SGB=103.742;VDB=0.610267;EFF=INTRON(MODIFIER||||170|LOC_Os06g23740|protein_coding|CODING|LOC_Os06g23740.1|2|1) FN725-S.SNP.6:13873511 chr06:013873511 0 W/13873511-13873511 FN725-S Single Base Substitution G-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN779-S.SNP.6:13874389 chr06:013874389 0 W/13874389-13874389 FN779-S Single Base Substitution G-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2440.SNP.6:13885815 chr06:013885815 0 W/13885815-13885815 FN2440 SNP G -> A AC=1;AN=200;BQB=0.999911;DP=3541;DP4=1508,1771,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25614e-06;MQSB=0.642919;RPB=0.851248;SGB=45.0543;VDB=0.608538;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G183|317|LOC_Os06g23770|protein_coding|CODING|LOC_Os06g23770.1|4|1) FN2218-S.SNP.6:13886017 chr06:013886017 0 W/13886017-13886017 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.206505;DP=2897;DP4=1467,1137,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.26895e-05;MQSB=0.813002;RPB=0.830211;SGB=62.7569;VDB=0.713512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G116V|317|LOC_Os06g23770|protein_coding|CODING|LOC_Os06g23770.1|4|1) FN2640-S.SNP.6:13889185 chr06:013889185 0 W/13889185-13889185 FN2640-S SNP C -> A AC=1;AN=200;BQB=0.996314;DP=3967;DP4=1886,1780,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33875e-08;MQSB=0.113445;RPB=0.860197;SGB=91.1059;VDB=0.0973028;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P59|114|LOC_Os06g23775|protein_coding|CODING|LOC_Os06g23775.1|1|1) FN2249-S.SNP.6:13890972 chr06:013890972 0 W/13890972-13890972 FN2249-S SNP C -> T AC=1;AN=190;BQB=0.69532;DP=4643;DP4=2487,1846,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53934e-09;MQSB=0.991354;RPB=0.736293;SGB=8.77275;VDB=0.94439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.6:13895693 chr06:013895693 0 W/13895693-13895693 FN1658-S SNP C -> T AC=1;AN=188;BQB=0.857318;DP=2215;DP4=1010,1166,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22732e-05;MQSB=0.990216;RPB=0.888789;SGB=25.3545;VDB=0.0700156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A191V|298|LOC_Os06g23780|protein_coding|CODING|LOC_Os06g23780.1|6|1) FN3722-S.SNP.6:13906678 chr06:013906678 0 W/13906678-13906678 FN3722-S SNP G -> A AC=1;AN=188;BQB=0.885519;DP=2936;DP4=1319,1518,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93296e-07;MQSB=0.859345;RPB=0.307342;SGB=62.7569;VDB=0.111591;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q148*|236|LOC_Os06g23800|protein_coding|CODING|LOC_Os06g23800.2|4|1);LOF=(LOC_Os06g23800|LOC_Os06g23800|1|1.00);NMD=(LOC_Os06g23800|LOC_Os06g23800|1|1.00) FN3663-S.SNP.6:13912810 chr06:013912810 0 W/13912810-13912810 FN3663-S SNP C -> T AC=1;AN=188;BQB=0.985733;DP=2344;DP4=1321,943,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000252934;MQSB=0.999809;RPB=0.489802;SGB=30.8803;VDB=0.405689;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.6:13912873 chr06:013912873 0 W/13912873-13912873 FN-285 Single Base Substitution C-T INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2495.SNP.6:13921768 chr06:013921768 0 W/13921768-13921768 FN2495 SNP G -> T AC=2;AN=200;BQB=0.326301;DP=5112;DP4=2215,2666,13,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.16448e-20;MQSB=0.453174;RPB=0.761792;SGB=78.9831;VDB=0.577654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.6:13924645 chr06:013924645 0 W/13924645-13924645 FN2356 SNP G -> T AC=1;AN=192;BQB=0.774598;DP=5508;DP4=2157,3046,11,4;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.242556;MQB=0.0698762;MQSB=0;RPB=0.177404;SGB=43.3444;VDB=0.740498;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R352M|611|LOC_Os06g23820|protein_coding|CODING|LOC_Os06g23820.1|1|1) FN2673-S.SNP.6:13924830 chr06:013924830 0 W/13924830-13924830 FN2673-S SNP T -> C AC=2;AN=200;BQB=0.302825;DP=4627;DP4=1876,2190,39,40;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.0019451;MQB=1.55203e-33;MQSB=0.472928;RPB=0.403791;SGB=-44.2243;VDB=0.118102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S414P|611|LOC_Os06g23820|protein_coding|CODING|LOC_Os06g23820.1|1|1) FN2249-S.SNP.6:13926023 chr06:013926023 0 W/13926023-13926023 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.135235;DP=3250;DP4=1538,1470,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00923077;MQB=0.00343171;MQSB=0.559563;RPB=0.937443;SGB=80.9724;VDB=0.424525;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E150K|415|LOC_Os06g23830|protein_coding|CODING|LOC_Os06g23830.1|1|1) FN966-S.SNP.6:13933648 chr06:013933648 0 W/13933648-13933648 FN966-S Single Base Substitution T-A INTERGENIC HET SNo: 870, Mutant_ID: FN966-S, Generation: M2, Mutations: 8, Genes: 2, Seed availability: Yes. FN1690-S.SNP.6:13937349 chr06:013937349 0 W/13937349-13937349 FN1690-S SNP T -> G AC=1;AN=188;BQB=0.0129203;DP=3720;DP4=1801,1891,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.32807e-07;MQSB=0.999767;RPB=0.750756;SGB=28.6195;VDB=0.569677;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.6:13948526 chr06:013948526 0 W/13948526-13948526 FN405-S Single Base Substitution A-T INTRON HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1272-S.SNP.6:13952718 chr06:013952718 0 W/13952718-13952718 FN1272-S Single Base Substitution C-T INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN833-S.SNP.6:13953763 chr06:013953763 0 W/13953763-13953763 FN833-S Single Base Substitution C-A INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN2600-S.SNP.6:13955945 chr06:013955945 0 W/13955945-13955945 FN2600-S SNP C -> A AC=1;AN=198;BQB=0.956678;DP=4533;DP4=2279,1972,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19561e-15;MQSB=0.871751;RPB=0.995009;SGB=55.2955;VDB=0.588473;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.6:13957721 chr06:013957721 0 W/13957721-13957721 FN2426 SNP G -> T AC=1;AN=200;BQB=0.827418;DP=3940;DP4=1908,1779,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000253807;MQB=4.1828e-07;MQSB=0.262485;RPB=0.967732;SGB=33.0593;VDB=0.853679;EFF=INTRON(MODIFIER||||99|LOC_Os06g23880|protein_coding|CODING|LOC_Os06g23880.1|2|1) FN1029-S.SNP.6:13963828 chr06:013963828 0 W/13963828-13963828 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1442-S.SNP.6:13971698 chr06:013971698 0 W/13971698-13971698 FN1442-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g23910 expressed protein SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1700-S.SNP.6:13974272 chr06:013974272 0 W/13974272-13974272 FN1700-S SNP T -> C AC=1;AN=188;BQB=0.972081;DP=2149;DP4=1027,1086,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.60586e-05;MQSB=0.99322;RPB=0.195891;SGB=21.8113;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.6:13976482 chr06:013976482 0 W/13976482-13976482 FN1255-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1255-S.SNP.6:13976483 chr06:013976483 0 W/13976483-13976483 FN1255-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g23920 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN4161-S.SNP.6:13986404 chr06:013986404 0 W/13986404-13986404 FN4161-S SNP T -> C AC=2;AN=170;BQB=0.959169;DP=2648;DP4=1218,1315,14,19;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=8.42009e-12;MQSB=0.011134;RPB=0.850437;SGB=103.731;VDB=0.275807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.6:13986799 chr06:013986799 0 W/13986799-13986799 FN1076-S Single Base Substitution C-T INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3666-S.SNP.6:13987287 chr06:013987287 0 W/13987287-13987287 FN3666-S SNP C -> T AC=1;AN=188;BQB=0.651324;DP=2474;DP4=1159,1199,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.05065e-05;MQSB=0.977705;RPB=0.0153078;SGB=21.8853;VDB=0.0371434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.6:13991390 chr06:013991390 0 W/13991390-13991390 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1681-S.SNP.6:13992667 chr06:013992667 0 W/13992667-13992667 FN1681-S SNP C -> A AC=1;AN=188;BQB=0.0270521;DP=3376;DP4=1757,1580,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.31299e-05;MQSB=0.988794;RPB=0.798742;SGB=-91.3539;VDB=0.748433;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.6:13994776 chr06:013994776 0 W/13994776-13994776 FN772-S Single Base Substitution A-G INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1585-S.SNP.6:14000760 chr06:014000760 0 W/14000760-14000760 FN1585-S Single Base Substitution G-C INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-124.SNP.6:14002408 chr06:014002408 0 W/14002408-14002408 FN-124 Single Base Substitution C-T INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2619-S.SNP.6:14006184 chr06:014006184 0 W/14006184-14006184 FN2619-S SNP C -> A AC=2;AN=198;BQB=0.278369;DP=3981;DP4=1925,1775,30,42;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.51775e-41;MQSB=0.875969;RPB=0.708785;SGB=197.915;VDB=0.106119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.6:14006185 chr06:014006185 0 W/14006185-14006185 FN2619-S SNP C -> A AC=2;AN=198;BQB=0.875192;DP=3982;DP4=1911,1753,31,39;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.17354e-40;MQSB=0.868402;RPB=0.380422;SGB=191.725;VDB=0.0832471;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.6:14007436 chr06:014007436 0 W/14007436-14007436 FN-336 Single Base Substitution G-A INTRON HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN-336.SNP.6:14007437 chr06:014007437 0 W/14007437-14007437 FN-336 Single Base Substitution T-G INTRON HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2562-S.SNP.6:14013392 chr06:014013392 0 W/14013392-14013392 FN2562-S SNP T -> A AC=1;AN=198;BQB=0.273481;DP=4382;DP4=2023,2018,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.76569e-16;MQSB=0.986287;RPB=0.263363;SGB=79.6954;VDB=0.757783;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.6:14017837 chr06:014017837 0 W/14017837-14017837 FN244-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN459-S.SNP.6:14020096 chr06:014020096 0 W/14020096-14020096 FN459-S Single Base Substitution C-A INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1086-S.SNP.6:14022592 chr06:014022592 0 W/14022592-14022592 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. W426-1-1.SNP.6:14023679 chr06:014023679 0 W/14023679-14023679 W426-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1559-S.SNP.6:14026068 chr06:014026068 0 W/14026068-14026068 FN1559-S Single Base Substitution C-A INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1384-S.SNP.6:14026251 chr06:014026251 0 W/14026251-14026251 FN1384-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1465-S.SNP.6:14029510 chr06:014029510 0 W/14029510-14029510 FN1465-S Single Base Substitution C-T INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN961-S.SNP.6:14033230 chr06:014033230 0 W/14033230-14033230 FN961-S Single Base Substitution A-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2316.SNP.6:14035538 chr06:014035538 0 W/14035538-14035538 FN2316 SNP T -> C AC=2;AN=192;BQB=0.962756;DP=4841;DP4=2389,2123,27,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000413138;MQB=1.19028e-29;MQSB=0.998581;RPB=0.679067;SGB=-54.9321;VDB=0.549321;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.6:14035804 chr06:014035804 0 W/14035804-14035804 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.987073;DP=2395;DP4=1286,1011,5,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000282665;MQSB=0.0650101;RPB=0.572025;SGB=25.2211;VDB=0.42503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.6:14036988 chr06:014036988 0 W/14036988-14036988 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.450003;DP=3242;DP4=1827,1199,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000308452;MQB=0.000257352;MQSB=1.27391e-09;RPB=0.616557;SGB=5.5382;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.6:14042607 chr06:014042607 0 W/14042607-14042607 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.899274;DP=4910;DP4=2524,2172,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.06971e-10;MQSB=0.903089;RPB=0.834198;SGB=51.0851;VDB=0.94202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.6:14048013 chr06:014048013 0 W/14048013-14048013 FN2452 SNP A -> T AC=2;AN=200;BQB=0.307316;DP=2636;DP4=880,1601,7,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.17796e-06;MQSB=0.443268;RPB=0.969054;SGB=37.3004;VDB=0.628046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.6:14049512 chr06:014049512 0 W/14049512-14049512 FN2300 SNP G -> A AC=2;AN=192;BQB=0.930381;DP=4777;DP4=2216,2329,23,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.31723e-24;MQSB=0.981313;RPB=0.0572173;SGB=52.7209;VDB=0.421949;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1677V|1794|LOC_Os06g24050|protein_coding|CODING|LOC_Os06g24050.1|13|1) FN937-S.SNP.6:14052923 chr06:014052923 0 W/14052923-14052923 FN937-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g24050 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2579-S.SNP.6:14053862 chr06:014053862 0 W/14053862-14053862 FN2579-S SNP G -> T AC=1;AN=198;BQB=0.823738;DP=3012;DP4=1374,1406,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0136122;MQB=0.00194837;MQSB=1.31136e-38;RPB=0.999594;SGB=40.3588;VDB=0.627244;EFF=INTRON(MODIFIER||||1794|LOC_Os06g24050|protein_coding|CODING|LOC_Os06g24050.1|7|1) FN4167-S.SNP.6:14068785 chr06:014068785 0 W/14068785-14068785 FN4167-S SNP T -> C AC=2;AN=170;BQB=0.41509;DP=1492;DP4=466,975,6,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.21904e-06;MQSB=0.984266;RPB=0.441674;SGB=31.4354;VDB=0.403399;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.6:14071278 chr06:014071278 0 W/14071278-14071278 FN4224-S SNP A -> G AC=1;AN=170;BQB=0.690981;DP=2300;DP4=1072,1161,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000182172;MQSB=0.893228;RPB=0.835166;SGB=24.5502;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.6:14071561 chr06:014071561 0 W/14071561-14071561 FN542-S Single Base Substitution C-T INTERGENIC HOMO SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2657-S.SNP.6:14072701 chr06:014072701 0 W/14072701-14072701 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.325939;DP=4242;DP4=1430,2537,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39877e-16;MQSB=0.640235;RPB=0.990407;SGB=94.3471;VDB=0.698502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.6:14073557 chr06:014073557 0 W/14073557-14073557 FN3839-S SNP A -> C AC=1;AN=190;BQB=0.999636;DP=2420;DP4=1192,1134,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61603e-08;MQSB=0.996665;RPB=0.984515;SGB=36.1006;VDB=0.302226;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.6:14075131 chr06:014075131 0 W/14075131-14075131 FN4020-S SNP A -> G AC=1;AN=168;BQB=0.999999;DP=2602;DP4=1091,1314,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.84892e-09;MQSB=0.954568;RPB=0.246805;SGB=38.1788;VDB=0.0348515;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.6:14076674 chr06:014076674 0 W/14076674-14076674 FN4224-S SNP C -> A AC=1;AN=170;BQB=0.949818;DP=2105;DP4=981,1075,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.23284e-06;MQSB=0.889451;RPB=0.958613;SGB=43.4296;VDB=0.831731;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.6:14083526 chr06:014083526 0 W/14083526-14083526 FN4107-S SNP A -> C AC=2;AN=182;BQB=0.993653;DP=3022;DP4=1399,1538,10,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.86821e-14;MQSB=0.958527;RPB=0.686006;SGB=67.2255;VDB=0.792587;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.6:14083559 chr06:014083559 0 W/14083559-14083559 FN4083-S SNP A -> C AC=2;AN=182;BQB=0.998092;DP=2920;DP4=1377,1431,17,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.01682e-21;MQSB=0.944178;RPB=0.619482;SGB=80.8939;VDB=0.337011;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.6:14084911 chr06:014084911 0 W/14084911-14084911 FN_N1-213-1 Single Base Substitution C-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2403.SNP.6:14088922 chr06:014088922 0 W/14088922-14088922 FN2403 SNP T -> A AC=1;AN=200;BQB=0.00952924;DP=2866;DP4=1404,843,6,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000348918;MQB=1.07353e-07;MQSB=0.010611;RPB=9.48941e-05;SGB=-241.696;VDB=5.59891e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.6:14088923 chr06:014088923 0 W/14088923-14088923 FN2403 SNP C -> A AC=1;AN=200;BQB=0.934286;DP=2869;DP4=1467,1041,6,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000348553;MQB=0.00276768;MQSB=0.00769531;RPB=0.0943684;SGB=11.2488;VDB=0.395899;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.6:14096177 chr06:014096177 0 W/14096177-14096177 FN502-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g24090 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN622-S.SNP.6:14098520 chr06:014098520 0 W/14098520-14098520 FN622-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN804-S.SNP.6:14105068 chr06:014105068 0 W/14105068-14105068 FN804-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1409-S.SNP.6:14107534 chr06:014107534 0 W/14107534-14107534 FN1409-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2288.SNP.6:14111122 chr06:014111122 0 W/14111122-14111122 FN2288 SNP G -> A AC=1;AN=192;BQB=0.643091;DP=4804;DP4=2361,2201,14,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.50645e-11;MQSB=0.867371;RPB=0.776439;SGB=54.0374;VDB=0.286472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T369I|1344|LOC_Os06g24110|protein_coding|CODING|LOC_Os06g24110.1|1|1) FN679-S.SNP.6:14113466 chr06:014113466 0 W/14113466-14113466 FN679-S Single Base Substitution G-C INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN_935-1.SNP.6:14114049 chr06:014114049 0 W/14114049-14114049 FN_935-1 Single Base Substitution A-G HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. CW-631-3-1.SNP.6:14114426 chr06:014114426 0 W/14114426-14114426 CW-631-3-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2325.SNP.6:14125336 chr06:014125336 0 W/14125336-14125336 FN2325 SNP G -> T AC=2;AN=192;BQB=0.886198;DP=5081;DP4=2641,2163,19,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.32277e-23;MQSB=0.988257;RPB=0.999557;SGB=44.8992;VDB=0.0982524;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.6:14126192 chr06:014126192 0 W/14126192-14126192 FN489-S Single Base Substitution C-T INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN3302-S.SNP.6:14132222 chr06:014132222 0 W/14132222-14132222 FN3302-S SNP A -> C AC=1;AN=184;BQB=0.790426;DP=2915;DP4=1468,1323,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.1528e-08;MQSB=0.903004;RPB=0.99997;SGB=25.7969;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.6:14135807 chr06:014135807 0 W/14135807-14135807 FN472-S Single Base Substitution C-T INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-392.SNP.6:14137806 chr06:014137806 0 W/14137806-14137806 FN-392 Single Base Substitution C-T INTERGENIC HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2107-S.SNP.6:14140997 chr06:014140997 0 W/14140997-14140997 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.242059;DP=2682;DP4=1261,1372,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00782998;MQB=0.00557539;MQSB=9.20636e-05;RPB=0.899429;SGB=-16.665;VDB=0.117132;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L502|985|LOC_Os06g24160|protein_coding|CODING|LOC_Os06g24160.1|6|1) FN1493-S.SNP.6:14145947 chr06:014145947 0 W/14145947-14145947 FN1493-S Single Base Substitution C-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3959-S.SNP.6:14148435 chr06:014148435 0 W/14148435-14148435 FN3959-S SNP G -> T AC=1;AN=168;BQB=0.995134;DP=2597;DP4=1233,1262,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.012707;MQB=0.0048442;MQSB=0.206116;RPB=0.923164;SGB=12.4615;VDB=0.622324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F385L|901|LOC_Os06g24170|protein_coding|CODING|LOC_Os06g24170.1|2|1) FN3831-S.SNP.6:14157853 chr06:014157853 0 W/14157853-14157853 FN3831-S SNP T -> G AC=1;AN=190;BQB=0.906806;DP=2952;DP4=1149,1675,2,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27205e-08;MQSB=0.995659;RPB=0.91944;SGB=50.3161;VDB=0.755273;EFF=INTERGENIC(MODIFIER||||||||||1) FN-251.SNP.6:14159467 chr06:014159467 0 W/14159467-14159467 FN-251 Single Base Substitution G-A INTERGENIC HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN-251.SNP.6:14159468 chr06:014159468 0 W/14159468-14159468 FN-251 Single Base Substitution G-A INTERGENIC HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN1080-S.SNP.6:14163617 chr06:014163617 0 W/14163617-14163617 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2221-S.SNP.6:14169577 chr06:014169577 0 W/14169577-14169577 FN2221-S SNP T -> C AC=1;AN=190;BQB=0.302575;DP=4871;DP4=2425,2088,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.63591e-16;MQSB=0.999909;RPB=0.859548;SGB=32.0809;VDB=0.889091;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.6:14172121 chr06:014172121 0 W/14172121-14172121 FN581-S Single Base Substitution C-T INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN537-S.SNP.6:14186548 chr06:014186548 0 W/14186548-14186548 FN537-S Single Base Substitution A-T INTERGENIC HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN537-S.SNP.6:14186549 chr06:014186549 0 W/14186549-14186549 FN537-S Single Base Substitution C-T INTERGENIC HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN-62.SNP.6:14188601 chr06:014188601 0 W/14188601-14188601 FN-62 Single Base Substitution A-G INTERGENIC HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2351.SNP.6:14189243 chr06:014189243 0 W/14189243-14189243 FN2351 SNP G -> T AC=1;AN=192;BQB=0.976682;DP=4236;DP4=2254,1749,1,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.81421e-06;MQSB=0.85685;RPB=0.872155;SGB=21.9585;VDB=0.955963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.6:14191274 chr06:014191274 0 W/14191274-14191274 FN3708-S SNP T -> C AC=1;AN=190;BQB=0.655348;DP=2946;DP4=1346,1511,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.74522e-05;MQSB=0.959701;RPB=0.949327;SGB=44.5415;VDB=0.376838;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.6:14193635 chr06:014193635 0 W/14193635-14193635 FN949-S Single Base Substitution A-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN594-S.SNP.6:14205306 chr06:014205306 0 W/14205306-14205306 FN594-S Single Base Substitution A-T INTRON HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN480-S.SNP.6:14205447 chr06:014205447 0 W/14205447-14205447 FN480-S Single Base Substitution G-C INTRON HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN-406.SNP.6:14208292 chr06:014208292 0 W/14208292-14208292 FN-406 Single Base Substitution A-T INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1749-S.SNP.6:14208582 chr06:014208582 0 W/14208582-14208582 FN1749-S SNP C -> A AC=2;AN=188;BQB=0.228527;DP=1213;DP4=346,784,4,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.5653e-05;MQSB=0.0542529;RPB=0.862789;SGB=20.9896;VDB=0.217163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.6:14209807 chr06:014209807 0 W/14209807-14209807 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.757366;DP=3333;DP4=1772,1521,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.00090009;MQB=1.70715e-05;MQSB=0.643617;RPB=0.0958329;SGB=-72.7757;VDB=0.187516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.6:14218927 chr06:014218927 0 W/14218927-14218927 FN2774-S SNP C -> A AC=1;AN=198;BQB=0.660639;DP=4257;DP4=2128,1916,12,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.55703e-10;MQSB=0.997857;RPB=0.188299;SGB=29.3443;VDB=0.399825;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W499L|1019|LOC_Os06g24310|protein_coding|CODING|LOC_Os06g24310.1|5|1) FN3395-S.SNP.6:14236991 chr06:014236991 0 W/14236991-14236991 FN3395-S SNP T -> G AC=1;AN=184;BQB=0.688497;DP=3806;DP4=1736,1915,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.02511e-10;MQSB=0.986903;RPB=0.163141;SGB=38.4058;VDB=0.101881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.6:14237915 chr06:014237915 0 W/14237915-14237915 FN1614-S Single Base Substitution G-A INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN_N1-130-1.SNP.6:14241754 chr06:014241754 0 W/14241754-14241754 FN_N1-130-1 Single Base Substitution C-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3371-S.SNP.6:14246427 chr06:014246427 0 W/14246427-14246427 FN3371-S SNP G -> A AC=1;AN=184;BQB=0.977061;DP=3078;DP4=1688,1293,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.00129955;MQB=0.181392;MQSB=5.57276e-23;RPB=0.792693;SGB=35.884;VDB=0.247819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1289C|1756|LOC_Os06g24350|protein_coding|CODING|LOC_Os06g24350.1|5|1) W276-2-1.SNP.6:14254357 chr06:014254357 0 W/14254357-14254357 W276-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1579-S.SNP.6:14255120 chr06:014255120 0 W/14255120-14255120 FN1579-S Single Base Substitution C-A INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1579-S.SNP.6:14255123 chr06:014255123 0 W/14255123-14255123 FN1579-S Single Base Substitution G-C INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN3570-S.SNP.6:14262516 chr06:014262516 0 W/14262516-14262516 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.98014;DP=2650;DP4=1303,1234,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.70032e-09;MQSB=0.999661;RPB=0.874638;SGB=39.6545;VDB=0.321842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.6:14263034 chr06:014263034 0 W/14263034-14263034 FN3288-S SNP G -> C AC=2;AN=184;BQB=0.993011;DP=2404;DP4=928,1387,9,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.13638e-11;MQSB=0.985269;RPB=0.9952;SGB=80.3949;VDB=0.697768;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.6:14264389 chr06:014264389 0 W/14264389-14264389 FN3343-S SNP G -> T AC=1;AN=184;BQB=0.937179;DP=3029;DP4=1710,1251,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.72494e-09;MQSB=0.919902;RPB=0.993612;SGB=57.786;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.6:14268783 chr06:014268783 0 W/14268783-14268783 FN889-S Single Base Substitution G-A INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN1324-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN1324-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2233-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.795176;DP=4796;DP4=2281,2273,0,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70925e-05;MQSB=0.987964;RPB=0.455812;SGB=39.9877;VDB=0.780718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN3464-S SNP C -> T AC=2;AN=184;BQB=0.720441;DP=2942;DP4=1498,1374,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.19429e-09;MQSB=0.999894;RPB=0.999385;SGB=84.9167;VDB=0.573432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.997958;DP=2536;DP4=1310,1145,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.74203e-10;MQSB=0.999102;RPB=0.995339;SGB=68.9144;VDB=0.26996;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN4188-S SNP C -> T AC=2;AN=170;BQB=0.692325;DP=2510;DP4=1260,1152,14,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.94821e-15;MQSB=0.87816;RPB=0.826448;SGB=96.8457;VDB=0.243009;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN457-S Single Base Substitution C-T INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN494-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN494-S Single Base Substitution C-T INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN732-S.SNP.6:14270898 chr06:014270898 0 W/14270898-14270898 FN732-S Single Base Substitution C-T INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN934-S.SNP.6:14273911 chr06:014273911 0 W/14273911-14273911 FN934-S Single Base Substitution G-C INTRON HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2439.SNP.6:14274553 chr06:014274553 0 W/14274553-14274553 FN2439 SNP C -> T AC=1;AN=200;BQB=0.563382;DP=4130;DP4=2044,1888,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28198e-05;MQSB=0.832213;RPB=0.993954;SGB=8.64371;VDB=0.915915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T390I|564|LOC_Os06g24380|protein_coding|CODING|LOC_Os06g24380.1|2|1) FN511-S.SNP.6:14277960 chr06:014277960 0 W/14277960-14277960 FN511-S Single Base Substitution T-A INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN2461.SNP.6:14280865 chr06:014280865 0 W/14280865-14280865 FN2461 SNP T -> C AC=1;AN=200;BQB=0.259035;DP=5012;DP4=2226,2454,20,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16574e-13;MQSB=0.969976;RPB=0.341797;SGB=25.5416;VDB=0.282204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.6:14280966 chr06:014280966 0 W/14280966-14280966 FN2659-S SNP T -> A AC=1;AN=200;BQB=0.919316;DP=5036;DP4=2363,2465,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91548e-13;MQSB=0.809105;RPB=0.562854;SGB=100.316;VDB=0.239427;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.6:14280967 chr06:014280967 0 W/14280967-14280967 FN980-S Single Base Substitution A-T INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. 703-4.SNP.6:14297240 chr06:014297240 0 W/14297240-14297240 703-4 Single Base Substitution G-A INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN1728-S.SNP.6:14297447 chr06:014297447 0 W/14297447-14297447 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.308842;DP=3011;DP4=1186,1778,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000332116;MQB=3.40445e-07;MQSB=0.223764;RPB=0.9735;SGB=-35.5377;VDB=0.101526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.6:14297448 chr06:014297448 0 W/14297448-14297448 FN1728-S SNP T -> A AC=1;AN=188;BQB=0.0224805;DP=3013;DP4=1179,1780,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00066379;MQB=0.000888346;MQSB=0.263746;RPB=0.990488;SGB=-107.522;VDB=0.903782;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.6:14298253 chr06:014298253 0 W/14298253-14298253 FN4064-S SNP T -> A AC=2;AN=168;BQB=0.277633;DP=2784;DP4=1131,1309,14,184;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00466954;MQB=0;MQSB=2.44651e-09;RPB=1.34323e-17;SGB=-1884.57;VDB=1.89614e-20;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.6:14298254 chr06:014298254 0 W/14298254-14298254 FN4064-S SNP T -> A AC=2;AN=168;BQB=0.567613;DP=2784;DP4=1140,1515,9,8;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00466954;MQB=3.13147e-07;MQSB=1.19956e-08;RPB=0.987372;SGB=48.4712;VDB=0.35339;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.6:14301737 chr06:014301737 0 W/14301737-14301737 FN2209-S SNP A -> G AC=2;AN=190;BQB=0.546451;DP=5302;DP4=2613,2170,29,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.1341e-21;MQSB=0.41214;RPB=0.984659;SGB=50.7274;VDB=0.376392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.6:14303570 chr06:014303570 0 W/14303570-14303570 FN2091-S SNP G -> A AC=2;AN=168;BQB=0.124254;DP=2922;DP4=865,1960,11,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.47546e-16;MQSB=0.996534;RPB=0.99295;SGB=-102.59;VDB=0.684608;EFF=INTRON(MODIFIER||||1134|LOC_Os06g24420|protein_coding|CODING|LOC_Os06g24420.1|1|1) FN2629-S.SNP.6:14303931 chr06:014303931 0 W/14303931-14303931 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.678451;DP=4734;DP4=2185,2250,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.75967e-17;MQSB=0.771088;RPB=0.910441;SGB=137.158;VDB=0.923584;EFF=INTRON(MODIFIER||||1134|LOC_Os06g24420|protein_coding|CODING|LOC_Os06g24420.1|1|1) FN2596-S.SNP.6:14306536 chr06:014306536 0 W/14306536-14306536 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.748393;DP=4249;DP4=2081,1932,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.61508e-13;MQSB=0.971612;RPB=0.600581;SGB=72.5051;VDB=0.766232;EFF=INTRON(MODIFIER||||1134|LOC_Os06g24420|protein_coding|CODING|LOC_Os06g24420.1|4|1) FN566-S.SNP.6:14309308 chr06:014309308 0 W/14309308-14309308 FN566-S Single Base Substitution G-T INTRON HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3472-S.SNP.6:14310268 chr06:014310268 0 W/14310268-14310268 FN3472-S SNP G -> A AC=2;AN=184;BQB=0.649422;DP=3008;DP4=1468,1439,22,29;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.0106383;MQB=3.40669e-11;MQSB=0.636072;RPB=0.761346;SGB=189.587;VDB=0.956052;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A980T|1134|LOC_Os06g24420|protein_coding|CODING|LOC_Os06g24420.1|9|1) FN2489.SNP.6:14311430 chr06:014311430 0 W/14311430-14311430 FN2489 SNP A -> T AC=1;AN=200;BQB=0.989745;DP=4985;DP4=2120,2619,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.43809e-12;MQSB=0.71783;RPB=0.999689;SGB=81.8956;VDB=0.604811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.6:14331446 chr06:014331446 0 W/14331446-14331446 FN3715-S SNP A -> G AC=1;AN=190;BQB=0.963002;DP=2759;DP4=1428,1216,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.29881e-10;MQSB=0.954298;RPB=0.889062;SGB=80.9724;VDB=0.760877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.6:14332298 chr06:014332298 0 W/14332298-14332298 FN3920-S SNP T -> C AC=2;AN=158;BQB=0.999822;DP=2481;DP4=1176,930,14,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.98842e-15;MQSB=0.946747;RPB=0.987815;SGB=-9.888;VDB=0.865363;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.6:14333153 chr06:014333153 0 W/14333153-14333153 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.0261669;DP=3216;DP4=1941,1230,14,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06292e-07;MQSB=0.984066;RPB=0.995114;SGB=-61.9025;VDB=0.860534;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.6:14339922 chr06:014339922 0 W/14339922-14339922 FN430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN883-S.SNP.6:14340270 chr06:014340270 0 W/14340270-14340270 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3855-S.SNP.6:14341612 chr06:014341612 0 W/14341612-14341612 FN3855-S SNP G -> A AC=2;AN=158;BQB=0.777146;DP=2184;DP4=922,1176,11,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.19454e-13;MQSB=0.464837;RPB=0.783504;SGB=121.348;VDB=0.692285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.6:14342265 chr06:014342265 0 W/14342265-14342265 FN3810-S SNP T -> C AC=2;AN=190;BQB=0.999764;DP=2213;DP4=1067,1086,8,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.45867e-09;MQSB=0.573897;RPB=0.517057;SGB=62.7569;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.6:14343583 chr06:014343583 0 W/14343583-14343583 FN1415-S Single Base Substitution G-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3779-S.SNP.6:14350707 chr06:014350707 0 W/14350707-14350707 FN3779-S SNP A -> C AC=2;AN=190;BQB=0.66678;DP=2906;DP4=1218,1532,10,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.05078e-17;MQSB=0.977625;RPB=0.948654;SGB=149.281;VDB=0.772408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.6:14356375 chr06:014356375 0 W/14356375-14356375 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.999877;DP=3327;DP4=1455,1799,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.96659e-10;MQSB=0.923009;RPB=0.908062;SGB=46.3132;VDB=0.863016;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.6:14356532 chr06:014356532 0 W/14356532-14356532 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.833687;DP=2287;DP4=1038,1165,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000158403;MQSB=0.974914;RPB=0.933745;SGB=25.439;VDB=0.895256;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.6:14358245 chr06:014358245 0 W/14358245-14358245 FN4187-S SNP C -> T AC=1;AN=170;BQB=0.954997;DP=2264;DP4=1471,722,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.61757e-05;MQSB=0.670537;RPB=0.767123;SGB=17.6652;VDB=0.438363;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.6:14358672 chr06:014358672 0 W/14358672-14358672 FN770-S Single Base Substitution T-C INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2721-S.SNP.6:14368981 chr06:014368981 0 W/14368981-14368981 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.738173;DP=4731;DP4=2213,2269,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.61174e-07;MQSB=0.981367;RPB=0.710418;SGB=40.4492;VDB=0.549935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E204K|215|LOC_Os06g24510|protein_coding|CODING|LOC_Os06g24510.1|6|1) FN465-S.SNP.6:14370946 chr06:014370946 0 W/14370946-14370946 FN465-S Single Base Substitution T-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2477.SNP.6:14372356 chr06:014372356 0 W/14372356-14372356 FN2477 SNP C -> T AC=1;AN=200;BQB=0.0037486;DP=4578;DP4=2177,2058,14,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79711e-08;MQSB=0.905226;RPB=0.587668;SGB=-13.7154;VDB=0.395955;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.6:14374321 chr06:014374321 0 W/14374321-14374321 FN-111 Single Base Substitution A-G INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN-111.SNP.6:14374322 chr06:014374322 0 W/14374322-14374322 FN-111 Single Base Substitution T-A INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN2606-S.SNP.6:14384055 chr06:014384055 0 W/14384055-14384055 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.447224;DP=4452;DP4=2018,2129,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.100404;MQB=0.940861;MQSB=1.35954e-37;RPB=0.932915;SGB=14.9842;VDB=0.697793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.6:14389093 chr06:014389093 0 W/14389093-14389093 FN3943-S SNP C -> T AC=1;AN=168;BQB=0.904292;DP=2484;DP4=1158,1205,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57433e-06;MQSB=0.681683;RPB=0.610302;SGB=56.6036;VDB=0.158752;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E294|845|LOC_Os06g24540|protein_coding|CODING|LOC_Os06g24540.1|1|1) FN2192-S.SNP.6:14390498 chr06:014390498 0 W/14390498-14390498 FN2192-S SNP A -> G AC=1;AN=190;BQB=0.776746;DP=4756;DP4=2552,1827,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99524e-09;MQSB=0.89876;RPB=0.990011;SGB=43.2083;VDB=0.947572;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.6:14393118 chr06:014393118 0 W/14393118-14393118 FN-410 Single Base Substitution C-A INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-247.SNP.6:14397566 chr06:014397566 0 W/14397566-14397566 FN-247 Single Base Substitution G-A INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3494-S.SNP.6:14399996 chr06:014399996 0 W/14399996-14399996 FN3494-S SNP G -> A AC=2;AN=184;BQB=0.778935;DP=3907;DP4=1860,1897,27,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.44814e-27;MQSB=0.794694;RPB=0.560405;SGB=109.016;VDB=0.0771547;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.6:14403192 chr06:014403192 0 W/14403192-14403192 FN-309 Single Base Substitution T-C INTRON HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-225.SNP.6:14404371 chr06:014404371 0 W/14404371-14404371 FN-225 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g24570 retrotransposon protein, putative, unclassified, expressed SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1300-S.SNP.6:14404852 chr06:014404852 0 W/14404852-14404852 FN1300-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN425-S.SNP.6:14412109 chr06:014412109 0 W/14412109-14412109 FN425-S Single Base Substitution G-C INTERGENIC HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN-101.SNP.6:14414826 chr06:014414826 0 W/14414826-14414826 FN-101 Single Base Substitution A-G INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN879-S.SNP.6:14417760 chr06:014417760 0 W/14417760-14417760 FN879-S Single Base Substitution C-T INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN879-S.SNP.6:14417765 chr06:014417765 0 W/14417765-14417765 FN879-S Single Base Substitution A-T INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN1335-S.SNP.6:14418476 chr06:014418476 0 W/14418476-14418476 FN1335-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1268-S.SNP.6:14423532 chr06:014423532 0 W/14423532-14423532 FN1268-S Single Base Substitution C-G INTRON HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1636-S.SNP.6:14432041 chr06:014432041 0 W/14432041-14432041 FN1636-S Single Base Substitution G-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1140-S.SNP.6:14432195 chr06:014432195 0 W/14432195-14432195 FN1140-S Single Base Substitution C-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN543-S.SNP.6:14434436 chr06:014434436 0 W/14434436-14434436 FN543-S Single Base Substitution G-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2706-S.SNP.6:14436625 chr06:014436625 0 W/14436625-14436625 FN2706-S SNP G -> A AC=2;AN=200;BQB=0.0314259;DP=4513;DP4=2208,2046,11,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.33888e-18;MQSB=0.950485;RPB=0.881156;SGB=76.378;VDB=0.0340535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.6:14437342 chr06:014437342 0 W/14437342-14437342 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.0267387;DP=3355;DP4=2022,1305,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00327869;MQB=0.146268;MQSB=0.683128;RPB=0.575834;SGB=3.99491;VDB=0.749699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.6:14437403 chr06:014437403 0 W/14437403-14437403 FN1233-S Single Base Substitution A-G INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3538-S.SNP.6:14439835 chr06:014439835 0 W/14439835-14439835 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.999811;DP=2984;DP4=1430,1478,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.90825e-07;MQSB=0.563083;RPB=0.527411;SGB=35.9843;VDB=0.523489;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.6:14439925 chr06:014439925 0 W/14439925-14439925 FN4109-S SNP T -> A AC=1;AN=182;BQB=0.930903;DP=3142;DP4=1383,1644,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.93661e-08;MQSB=0.874249;RPB=0.969537;SGB=35.6277;VDB=0.779569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.6:14446309 chr06:014446309 0 W/14446309-14446309 FN2711-S SNP T -> A AC=1;AN=200;BQB=0.976537;DP=4927;DP4=2243,2454,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.38768e-10;MQSB=0.545159;RPB=0.889177;SGB=68.0801;VDB=0.20292;EFF=INTRON(MODIFIER||||71|LOC_Os06g24610|protein_coding|CODING|LOC_Os06g24610.1|1|1) FN1213-S.SNP.6:14450813 chr06:014450813 0 W/14450813-14450813 FN1213-S Single Base Substitution C-G INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2600-S.SNP.6:14451054 chr06:014451054 0 W/14451054-14451054 FN2600-S SNP C -> A AC=1;AN=198;BQB=0.65503;DP=4041;DP4=1990,1806,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17637e-07;MQSB=0.560666;RPB=0.7579;SGB=67.9293;VDB=0.618384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.6:14451392 chr06:014451392 0 W/14451392-14451392 FN4074-S SNP C -> G AC=1;AN=182;BQB=0.999987;DP=2337;DP4=1111,1109,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=7.22408e-07;MQSB=2.44966e-09;RPB=0.517871;SGB=46.1603;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.6:14457669 chr06:014457669 0 W/14457669-14457669 FN2316 SNP G -> A AC=2;AN=192;BQB=0.5654;DP=4728;DP4=2669,1804,30,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.99193e-24;MQSB=0.939289;RPB=0.0179531;SGB=168.097;VDB=0.30996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.6:14457829 chr06:014457829 0 W/14457829-14457829 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.983739;DP=2453;DP4=1249,844,4,17;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.54329e-10;MQSB=0.621869;RPB=0.766657;SGB=-38.1432;VDB=0.132992;EFF=SPLICE_SITE_REGION(LOW||||234|LOC_Os06g24620|protein_coding|CODING|LOC_Os06g24620.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R5|234|LOC_Os06g24620|protein_coding|CODING|LOC_Os06g24620.1|1|1) FN1000-S.SNP.6:14458587 chr06:014458587 0 W/14458587-14458587 FN1000-S Single Base Substitution T-G INTRON HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1106-S.SNP.6:14459991 chr06:014459991 0 W/14459991-14459991 FN1106-S Single Base Substitution C-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN573-S.SNP.6:14463608 chr06:014463608 0 W/14463608-14463608 FN573-S Single Base Substitution A-T INTRON HOMO SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2665-S.SNP.6:14466302 chr06:014466302 0 W/14466302-14466302 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.481629;DP=4503;DP4=2212,2023,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00133245;MQB=2.25606e-09;MQSB=0.129583;RPB=0.940789;SGB=68.0801;VDB=0.0155327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.6:14476602 chr06:014476602 0 W/14476602-14476602 FN1015-S Single Base Substitution A-G INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN2083-S.SNP.6:14478097 chr06:014478097 0 W/14478097-14478097 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.0615181;DP=3928;DP4=1491,1996,280,122;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0453157;MQB=0;MQSB=7.66164e-20;RPB=0.232381;SGB=-2503.81;VDB=3.21336e-07;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.6:14489959 chr06:014489959 0 W/14489959-14489959 FN2331 SNP G -> A AC=1;AN=192;BQB=0.430673;DP=4731;DP4=2126,2272,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000211372;MQB=8.50948e-11;MQSB=0.945601;RPB=0.982799;SGB=-9.68954;VDB=0.325209;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V117|682|LOC_Os06g24670|protein_coding|CODING|LOC_Os06g24670.1|1|1) FN4142-S.SNP.6:14491126 chr06:014491126 0 W/14491126-14491126 FN4142-S SNP C -> T AC=1;AN=170;BQB=0.933108;DP=2455;DP4=1175,1221,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.99002e-08;MQSB=0.971245;RPB=0.948598;SGB=31.4354;VDB=0.0386011;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.6:14491635 chr06:014491635 0 W/14491635-14491635 FN1485-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2550-S.SNP.6:14493219 chr06:014493219 0 W/14493219-14493219 FN2550-S SNP G -> A AC=1;AN=198;BQB=0.50425;DP=4129;DP4=1971,1981,1,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00023638;MQSB=0.952021;RPB=0.678277;SGB=21.981;VDB=0.697961;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V177|633|LOC_Os06g24680|protein_coding|CODING|LOC_Os06g24680.1|1|1) FN-93.SNP.6:14493728 chr06:014493728 0 W/14493728-14493728 FN-93 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g24680 retrotransposon protein, putative, unclassified, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3434-S.SNP.6:14496321 chr06:014496321 0 W/14496321-14496321 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.98337;DP=2706;DP4=1244,1398,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000369549;MQB=3.60107e-09;MQSB=0.997118;RPB=0.957729;SGB=25.7969;VDB=0.511745;EFF=INTRON(MODIFIER||||116|LOC_Os06g24690|protein_coding|CODING|LOC_Os06g24690.1|2|1) FN4204-S.SNP.6:14510830 chr06:014510830 0 W/14510830-14510830 FN4204-S SNP C -> A AC=1;AN=170;BQB=0.899627;DP=2708;DP4=1306,1331,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.09611e-05;MQSB=0.981994;RPB=0.896829;SGB=30.1021;VDB=0.70846;EFF=INTRON(MODIFIER||||685|LOC_Os06g24704|protein_coding|CODING|LOC_Os06g24704.1|1|1) FN1358-S.SNP.6:14513067 chr06:014513067 0 W/14513067-14513067 FN1358-S Single Base Substitution A-C INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN3694-S.SNP.6:14513685 chr06:014513685 0 W/14513685-14513685 FN3694-S SNP G -> A AC=2;AN=190;BQB=0.40469;DP=3015;DP4=1342,1497,13,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.21081e-08;MQSB=0.791685;RPB=0.874129;SGB=57.4238;VDB=0.56222;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.6:14519803 chr06:014519803 0 W/14519803-14519803 FN815-S Single Base Substitution C-T INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3591-S.SNP.6:14523121 chr06:014523121 0 W/14523121-14523121 FN3591-S SNP G -> T AC=1;AN=188;BQB=0.999913;DP=2984;DP4=1261,1640,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17922e-08;MQSB=0.864209;RPB=0.418228;SGB=53.5223;VDB=0.658761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.6:14527776 chr06:014527776 0 W/14527776-14527776 FN2392 SNP T -> A AC=1;AN=200;BQB=0.224446;DP=4540;DP4=2146,2040,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.58249e-12;MQSB=0.711809;RPB=0.143708;SGB=81.8956;VDB=0.428304;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S102R|486|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S102R|463|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S102R|426|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.3|2|1) FN782-S.SNP.6:14529732 chr06:014529732 0 W/14529732-14529732 FN782-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN3384-S.SNP.6:14530523 chr06:014530523 0 W/14530523-14530523 FN3384-S SNP G -> A AC=1;AN=184;BQB=0.923668;DP=3279;DP4=1620,1575,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68768e-10;MQSB=0.865479;RPB=0.610885;SGB=53.3568;VDB=0.74261;EFF=UTR_3_PRIME(MODIFIER||605||463|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.2|5|1),UTR_3_PRIME(MODIFIER||54||426|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.3|6|1),INTRON(MODIFIER||||486|LOC_Os06g24730|protein_coding|CODING|LOC_Os06g24730.1|5|1) FN2468.SNP.6:14541278 chr06:014541278 0 W/14541278-14541278 FN2468 SNP A -> G AC=2;AN=200;BQB=0.965113;DP=4869;DP4=2555,1922,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.28209e-17;MQSB=0.484578;RPB=0.965468;SGB=65.9573;VDB=0.878466;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.6:14541532 chr06:014541532 0 W/14541532-14541532 FN580-S Single Base Substitution T-A INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1570-S.SNP.6:14541663 chr06:014541663 0 W/14541663-14541663 FN1570-S Single Base Substitution T-C INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN1389-S.SNP.6:14543329 chr06:014543329 0 W/14543329-14543329 FN1389-S Single Base Substitution G-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2538-S.SNP.6:14543995 chr06:014543995 0 W/14543995-14543995 FN2538-S SNP A -> T AC=1;AN=198;BQB=0.877243;DP=4231;DP4=1885,2154,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13581e-06;MQSB=0.78236;RPB=0.705082;SGB=32.9588;VDB=0.840151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.6:14544536 chr06:014544536 0 W/14544536-14544536 FN2591-S SNP C -> T AC=1;AN=198;BQB=0.92999;DP=3525;DP4=1805,1573,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000283688;MQB=1.08874e-05;MQSB=0.653249;RPB=0.804014;SGB=49.5489;VDB=0.211747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.6:14548126 chr06:014548126 0 W/14548126-14548126 FN1734-S SNP T -> C AC=1;AN=188;BQB=0.860325;DP=3586;DP4=1997,1549,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.32355e-14;MQSB=0.956311;RPB=0.631395;SGB=82.0471;VDB=0.164667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.6:14550897 chr06:014550897 0 W/14550897-14550897 FN1661-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2205-S.SNP.6:14554315 chr06:014554315 0 W/14554315-14554315 FN2205-S SNP A -> T AC=2;AN=190;BQB=0.727301;DP=4849;DP4=2124,2332,27,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000412456;MQB=5.87955e-21;MQSB=0.607355;RPB=0.970008;SGB=222.143;VDB=0.935691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cTt|H57L|274|LOC_Os06g24780|protein_coding|CODING|LOC_Os06g24780.1|1|1) FN2125-S.SNP.6:14557880 chr06:014557880 0 W/14557880-14557880 FN2125-S SNP G -> A AC=1;AN=168;BQB=0.11781;DP=3144;DP4=1246,1845,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0117684;MQB=0.981374;MQSB=0.0041112;RPB=0.961859;SGB=-15.8033;VDB=0.399825;EFF=INTRON(MODIFIER||||645|LOC_Os06g24790|protein_coding|CODING|LOC_Os06g24790.1|5|1) FN2622-S.SNP.6:14560063 chr06:014560063 0 W/14560063-14560063 FN2622-S SNP G -> A AC=2;AN=200;BQB=0.991039;DP=5304;DP4=2547,2411,40,19;HOB=0.0198;ICB=0.495051;MQ=25;MQ0F=0.175716;MQB=0.00241535;MQSB=0;RPB=0.617934;SGB=202.502;VDB=0.145535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V126M|232|LOC_Os06g24800|protein_coding|CODING|LOC_Os06g24800.1|1|1) FN436-S.SNP.6:14560063 chr06:014560063 0 W/14560063-14560063 FN436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g24800 retrotransposon protein, putative, unclassified, expressed SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2151-S.SNP.6:14577673 chr06:014577673 0 W/14577673-14577673 FN2151-S SNP C -> T AC=1;AN=168;BQB=2.59403e-05;DP=4314;DP4=2212,2043,17,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83789e-11;MQSB=0.999184;RPB=0.196752;SGB=-227.89;VDB=0.831234;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.6:14580905 chr06:014580905 0 W/14580905-14580905 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.994445;DP=1630;DP4=1221,351,9,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.81668e-05;MQSB=0.00156681;RPB=0.760341;SGB=38.987;VDB=0.221848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.6:14582280 chr06:014582280 0 W/14582280-14582280 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.849489;DP=4901;DP4=2734,1905,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.57739e-14;MQSB=0.962322;RPB=0.787059;SGB=23.9365;VDB=0.576477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.6:14582375 chr06:014582375 0 W/14582375-14582375 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.433293;DP=4818;DP4=2455,1978,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32692e-08;MQSB=0.936519;RPB=0.590276;SGB=58.2954;VDB=0.853056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3561-S.SNP.6:14585171 chr06:014585171 0 W/14585171-14585171 FN3561-S SNP A -> T AC=1;AN=188;BQB=0.942548;DP=2972;DP4=1593,1281,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.37614e-11;MQSB=0.771561;RPB=0.935474;SGB=41.3359;VDB=0.723687;EFF=INTRON(MODIFIER||||378|LOC_Os06g24870|protein_coding|CODING|LOC_Os06g24870.3|1|1),INTRON(MODIFIER||||378|LOC_Os06g24870|protein_coding|CODING|LOC_Os06g24870.2|1|1),INTRON(MODIFIER||||378|LOC_Os06g24870|protein_coding|CODING|LOC_Os06g24870.1|1|1) FN1375-S.SNP.6:14589792 chr06:014589792 0 W/14589792-14589792 FN1375-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN584-S.SNP.6:14597789 chr06:014597789 0 W/14597789-14597789 FN584-S Single Base Substitution T-G INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN-361.SNP.6:14600200 chr06:014600200 0 W/14600200-14600200 FN-361 Single Base Substitution A-T INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN4258-S.SNP.6:14611002 chr06:014611002 0 W/14611002-14611002 FN4258-S SNP C -> T AC=2;AN=170;BQB=0.998794;DP=2661;DP4=1456,1108,14,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20655e-13;MQSB=0.925658;RPB=0.741665;SGB=72.7472;VDB=0.741414;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.6:14615995 chr06:014615995 0 W/14615995-14615995 W278-3-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-142.SNP.6:14616789 chr06:014616789 0 W/14616789-14616789 FN-142 Single Base Substitution C-G UTR_5_PRIME HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3057-S.SNP.6:14616789 chr06:014616789 0 W/14616789-14616789 FN3057-S SNP C -> G AC=2;AN=184;BQB=0.961675;DP=2829;DP4=1621,1111,12,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.86128e-08;MQSB=0.157919;RPB=0.538105;SGB=67.4439;VDB=0.490153;EFF=UTR_5_PRIME(MODIFIER||110||125|LOC_Os06g24930|protein_coding|CODING|LOC_Os06g24930.1|1|1) FN846-S.SNP.6:14616789 chr06:014616789 0 W/14616789-14616789 FN846-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3050-S.SNP.6:14618369 chr06:014618369 0 W/14618369-14618369 FN3050-S SNP G -> A AC=1;AN=184;BQB=0.992906;DP=3079;DP4=1366,1626,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000974342;MQB=6.89057e-05;MQSB=0.874963;RPB=0.910566;SGB=44.2207;VDB=0.961034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.6:14621956 chr06:014621956 0 W/14621956-14621956 FN3826-S SNP G -> A AC=1;AN=190;BQB=0.967542;DP=2520;DP4=1179,1245,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=8.37826e-05;MQSB=0.00331639;RPB=0.524031;SGB=36.1006;VDB=0.643899;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A63|319|LOC_Os06g24950|protein_coding|CODING|LOC_Os06g24950.1|2|1) FN3862-S.SNP.6:14623967 chr06:014623967 0 W/14623967-14623967 FN3862-S SNP G -> C AC=1;AN=158;BQB=0.859145;DP=2249;DP4=1045,1125,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.12322e-06;MQSB=0.666093;RPB=0.188445;SGB=0.716704;VDB=0.529691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A399G|771|LOC_Os06g24960|protein_coding|CODING|LOC_Os06g24960.1|2|1) FN459-S.SNP.6:14626674 chr06:014626674 0 W/14626674-14626674 FN459-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g24970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN-286.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN-286 Single Base Substitution G-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-375.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN-375 Single Base Substitution G-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-394.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN-394 Single Base Substitution G-A INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-87.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN-87 Single Base Substitution G-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1153-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN1153-S Single Base Substitution G-A INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1215-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN1215-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1416-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN1416-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1640-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN1640-S Single Base Substitution G-A INTERGENIC Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2785-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN2785-S SNP G -> A AC=2;AN=198;BQB=0.146387;DP=4190;DP4=1970,1956,24,34;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.0169451;MQB=4.3512e-24;MQSB=0.775728;RPB=0.678705;SGB=198.334;VDB=0.603264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN3323-S SNP G -> A AC=1;AN=184;BQB=0.991228;DP=3735;DP4=1866,1775,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0291834;MQB=5.02852e-05;MQSB=2.23846e-05;RPB=0.128341;SGB=28.7043;VDB=0.54425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.98267;DP=3644;DP4=1810,1723,14,20;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0326564;MQB=2.07803e-12;MQSB=0.000350995;RPB=0.956184;SGB=109.705;VDB=0.474221;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN358-S Single Base Substitution G-A INTERGENIC HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN493-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN493-S Single Base Substitution G-A INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN666-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN666-S Single Base Substitution G-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN731-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN731-S Single Base Substitution G-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN848-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN861-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN861-S Single Base Substitution G-A INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN968-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN968-S Single Base Substitution G-A INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN976-S.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 FN976-S Single Base Substitution G-A INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. W313-1-1-1-1.SNP.6:14631535 chr06:014631535 0 W/14631535-14631535 W313-1-1-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN4072-S.SNP.6:14631905 chr06:014631905 0 W/14631905-14631905 FN4072-S SNP C -> T AC=2;AN=182;BQB=0.983585;DP=3015;DP4=1425,1516,13,8;HOB=0.0217365;ICB=0.494567;MQ=44;MQ0F=0.00995025;MQB=0.026435;MQSB=0.000420692;RPB=0.674972;SGB=63.7146;VDB=0.879078;EFF=INTERGENIC(MODIFIER||||||||||1) FN783-S.SNP.6:14632118 chr06:014632118 0 W/14632118-14632118 FN783-S Single Base Substitution G-A INTERGENIC HOMO SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2150-S.SNP.6:14632798 chr06:014632798 0 W/14632798-14632798 FN2150-S SNP G -> A AC=1;AN=168;BQB=0.0900866;DP=3280;DP4=1577,1662,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00335366;MQB=9.18051e-05;MQSB=0.0009139;RPB=0.983575;SGB=-66.4989;VDB=0.265537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.6:14635121 chr06:014635121 0 W/14635121-14635121 FN1270-S Single Base Substitution C-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN_830-6-1.SNP.6:14635249 chr06:014635249 0 W/14635249-14635249 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2496.SNP.6:14642080 chr06:014642080 0 W/14642080-14642080 FN2496 SNP G -> A AC=2;AN=200;BQB=0.844975;DP=4254;DP4=2130,1888,14,15;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0867419;MQB=0.000108454;MQSB=7.55433e-36;RPB=0.971245;SGB=94.3471;VDB=0.997229;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R20C|96|LOC_Os06g24990|protein_coding|CODING|LOC_Os06g24990.1|2|1) FN1509-S.SNP.6:14651113 chr06:014651113 0 W/14651113-14651113 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2161-S.SNP.6:14652885 chr06:014652885 0 W/14652885-14652885 FN2161-S SNP G -> A AC=2;AN=168;BQB=0.607279;DP=3378;DP4=1401,1884,12,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.21874e-14;MQSB=0.904689;RPB=0.708753;SGB=-46.9043;VDB=0.88886;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.6:14654524 chr06:014654524 0 W/14654524-14654524 FN712-S Single Base Substitution C-T INTRON HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3869-S.SNP.6:14656308 chr06:014656308 0 W/14656308-14656308 FN3869-S SNP A -> T AC=1;AN=158;BQB=0.807289;DP=2769;DP4=1215,1480,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.54057e-07;MQSB=0.991424;RPB=0.482621;SGB=55.806;VDB=0.768163;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.6:14658488 chr06:014658488 0 W/14658488-14658488 FN4234-S SNP C -> G AC=1;AN=170;BQB=0.976598;DP=2710;DP4=1313,1332,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.83479e-09;MQSB=0.942878;RPB=0.991471;SGB=19.8839;VDB=0.59783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E634Q|741|LOC_Os06g25050|protein_coding|CODING|LOC_Os06g25050.1|5|1) FN671-S.SNP.6:14667437 chr06:014667437 0 W/14667437-14667437 FN671-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1385-S.SNP.6:14670056 chr06:014670056 0 W/14670056-14670056 FN1385-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN936-S.SNP.6:14671230 chr06:014671230 0 W/14671230-14671230 FN936-S Single Base Substitution C-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN_777-2-1.SNP.6:14676504 chr06:014676504 0 W/14676504-14676504 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN_831-4-1.SNP.6:14704472 chr06:014704472 0 W/14704472-14704472 FN_831-4-1 Single Base Substitution G-A Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN-28.SNP.6:14704933 chr06:014704933 0 W/14704933-14704933 FN-28 Single Base Substitution C-T UTR_5_PRIME Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN3701-S.SNP.6:14705240 chr06:014705240 0 W/14705240-14705240 FN3701-S SNP G -> A AC=1;AN=190;BQB=0.980908;DP=2108;DP4=1027,846,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000373084;MQSB=0.270685;RPB=0.647405;SGB=30.8803;VDB=0.440716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V86I|147|LOC_Os06g25130|protein_coding|CODING|LOC_Os06g25130.1|1|1) FN2629-S.SNP.6:14707954 chr06:014707954 0 W/14707954-14707954 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.953742;DP=4453;DP4=1957,2227,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11405e-18;MQSB=0.965692;RPB=0.932762;SGB=60.747;VDB=0.677952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.6:14712545 chr06:014712545 0 W/14712545-14712545 FN3375-S SNP A -> T AC=2;AN=184;BQB=0.996938;DP=3018;DP4=1538,1381,19,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.29571e-20;MQSB=0.969671;RPB=0.323594;SGB=37.2381;VDB=0.802405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.6:14712573 chr06:014712573 0 W/14712573-14712573 FN1029-S Single Base Substitution C-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN545-S.SNP.6:14712786 chr06:014712786 0 W/14712786-14712786 FN545-S Single Base Substitution T-A INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3911-S.SNP.6:14718480 chr06:014718480 0 W/14718480-14718480 FN3911-S SNP T -> C AC=2;AN=158;BQB=0.978905;DP=2213;DP4=1080,1033,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.27314e-13;MQSB=0.770072;RPB=0.727105;SGB=90.7616;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.6:14721161 chr06:014721161 0 W/14721161-14721161 FN1643-S Single Base Substitution G-A STOP_GAINED Homo LOC_Os06g25160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1287-S.SNP.6:14728388 chr06:014728388 0 W/14728388-14728388 FN1287-S Single Base Substitution A-G INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2788-S.SNP.6:14728618 chr06:014728618 0 W/14728618-14728618 FN2788-S SNP G -> C AC=1;AN=198;BQB=0.654757;DP=4073;DP4=2085,1817,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.56088e-18;MQSB=0.944383;RPB=0.9564;SGB=63.0809;VDB=0.948029;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M763I|901|LOC_Os06g25170|protein_coding|CODING|LOC_Os06g25170.1|6|1) FN2659-S.SNP.6:14729607 chr06:014729607 0 W/14729607-14729607 FN2659-S SNP G -> T AC=1;AN=200;BQB=0.996372;DP=4938;DP4=2402,2195,12,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=7.76834e-06;MQSB=3.07034e-05;RPB=0.866973;SGB=32.0901;VDB=0.673997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.6:14740251 chr06:014740251 0 W/14740251-14740251 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.855942;DP=2711;DP4=1550,1065,15,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03115e-16;MQSB=0.999742;RPB=0.989709;SGB=112.047;VDB=0.692762;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P42S|499|LOC_Os06g25200|protein_coding|CODING|LOC_Os06g25200.1|1|1) FN3301-S.SNP.6:14746660 chr06:014746660 0 W/14746660-14746660 FN3301-S SNP A -> C AC=2;AN=184;BQB=0.985709;DP=3291;DP4=1455,1716,7,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.68786e-09;MQSB=0.903653;RPB=0.912863;SGB=39.2697;VDB=0.706175;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.6:14749019 chr06:014749019 0 W/14749019-14749019 FN-81 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25210 retrotransposon, putative, centromere-specific, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN406-S.SNP.6:14749577 chr06:014749577 0 W/14749577-14749577 FN406-S Single Base Substitution G-A INTRON HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN1696-S.SNP.6:14750062 chr06:014750062 0 W/14750062-14750062 FN1696-S SNP G -> A AC=1;AN=188;BQB=0.24734;DP=2887;DP4=1543,1305,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000692761;MQB=1.52021e-08;MQSB=0.985635;RPB=0.882009;SGB=-14.4565;VDB=0.855961;EFF=INTRON(MODIFIER||||900|LOC_Os06g25210|protein_coding|CODING|LOC_Os06g25210.1|7|1) FN3909-S.SNP.6:14750147 chr06:014750147 0 W/14750147-14750147 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.995678;DP=2476;DP4=1143,1217,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00121163;MQB=1.60395e-07;MQSB=0.959822;RPB=0.776039;SGB=37.4429;VDB=0.935722;EFF=INTRON(MODIFIER||||900|LOC_Os06g25210|protein_coding|CODING|LOC_Os06g25210.1|7|1) W453-3-1.SNP.6:14751799 chr06:014751799 0 W/14751799-14751799 W453-3-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g25210 retrotransposon, putative, centromere-specific, expressed SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2395.SNP.6:14753310 chr06:014753310 0 W/14753310-14753310 FN2395 SNP A -> G AC=1;AN=200;BQB=0.343111;DP=4522;DP4=1947,2186,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43908e-12;MQSB=0.695345;RPB=0.757886;SGB=69.1109;VDB=0.272946;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y296H|900|LOC_Os06g25210|protein_coding|CODING|LOC_Os06g25210.1|3|1) FN2121-S.SNP.6:14756362 chr06:014756362 0 W/14756362-14756362 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.54707;DP=3504;DP4=1570,1895,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.00406123;MQSB=0.234996;RPB=0.0919501;SGB=36.7696;VDB=0.0825849;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.6:14757476 chr06:014757476 0 W/14757476-14757476 FN944-S Single Base Substitution T-C INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1715-S.SNP.6:14761706 chr06:014761706 0 W/14761706-14761706 FN1715-S SNP A -> T AC=2;AN=188;BQB=0.723953;DP=2964;DP4=2199,707,36,4;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=0.000218382;MQSB=5.47107e-07;RPB=0.558711;SGB=-46.4986;VDB=0.00454863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.6:14763860 chr06:014763860 0 W/14763860-14763860 FN1536-S Single Base Substitution T-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. W279-4-1.SNP.6:14765884 chr06:014765884 0 W/14765884-14765884 W279-4-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3440-S.SNP.6:14790062 chr06:014790062 0 W/14790062-14790062 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.768707;DP=2044;DP4=819,1100,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=9.01574e-05;MQSB=4.9728e-06;RPB=0.28664;SGB=18.2315;VDB=0.927008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.6:14790591 chr06:014790591 0 W/14790591-14790591 FN2797-S SNP A -> G AC=1;AN=198;BQB=0.999967;DP=4442;DP4=2186,1950,19,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.21943e-17;MQSB=0.999882;RPB=0.899874;SGB=146.046;VDB=0.427872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.6:14798820 chr06:014798820 0 W/14798820-14798820 FN3820-S SNP A -> G AC=1;AN=190;BQB=0.751168;DP=3022;DP4=1491,1303,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.63886e-07;MQSB=0.953753;RPB=0.967579;SGB=32.5467;VDB=0.985771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V72A|711|LOC_Os06g25280|protein_coding|CODING|LOC_Os06g25280.1|1|1) FN2545-S.SNP.6:14799480 chr06:014799480 0 W/14799480-14799480 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.877325;DP=4152;DP4=1898,1971,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.9352e-08;MQSB=0.992168;RPB=0.529698;SGB=29.3443;VDB=0.840896;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.6:14806429 chr06:014806429 0 W/14806429-14806429 FN527-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. W426-1-1.SNP.6:14806803 chr06:014806803 0 W/14806803-14806803 W426-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN-59.SNP.6:14808884 chr06:014808884 0 W/14808884-14808884 FN-59 Single Base Substitution T-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2216-S.SNP.6:14825111 chr06:014825111 0 W/14825111-14825111 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.556321;DP=5004;DP4=2408,2318,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11105e-06;MQSB=0.182575;RPB=0.350199;SGB=46.7622;VDB=0.868888;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.6:14825406 chr06:014825406 0 W/14825406-14825406 FN722-S Single Base Substitution C-A INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2529-S.SNP.6:14825525 chr06:014825525 0 W/14825525-14825525 FN2529-S SNP C -> A AC=2;AN=198;BQB=0.998526;DP=4187;DP4=2033,1970,17,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00358252;MQB=1.32571e-15;MQSB=6.27074e-06;RPB=0.997945;SGB=76.0565;VDB=0.100471;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.6:14829148 chr06:014829148 0 W/14829148-14829148 FN1717-S SNP G -> A AC=2;AN=188;BQB=0.65068;DP=3443;DP4=1624,1745,23,33;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=3.03031e-20;MQSB=0.967058;RPB=0.867222;SGB=80.7984;VDB=0.994999;EFF=INTRON(MODIFIER||||1219|LOC_Os06g25320|protein_coding|CODING|LOC_Os06g25320.1|7|1) FN679-S.SNP.6:14829700 chr06:014829700 0 W/14829700-14829700 FN679-S Single Base Substitution T-C INTRON HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN865-S.SNP.6:14829901 chr06:014829901 0 W/14829901-14829901 FN865-S Single Base Substitution A-T INTRON HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1314-S.SNP.6:14838148 chr06:014838148 0 W/14838148-14838148 FN1314-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN601-S.SNP.6:14838387 chr06:014838387 0 W/14838387-14838387 FN601-S Single Base Substitution G-A INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN762-S.SNP.6:14839098 chr06:014839098 0 W/14839098-14839098 FN762-S Single Base Substitution T-C INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2267-S.SNP.6:14842727 chr06:014842727 0 W/14842727-14842727 FN2267-S SNP T -> A AC=1;AN=190;BQB=0.537808;DP=5035;DP4=2388,2284,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000595829;MQB=1.81689e-06;MQSB=0.92641;RPB=0.694379;SGB=-14.8836;VDB=0.521675;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K47*|73|LOC_Os06g25340|protein_coding|CODING|LOC_Os06g25340.1|2|1) FN947-S.SNP.6:14848830 chr06:014848830 0 W/14848830-14848830 FN947-S Single Base Substitution G-T INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1455-S.SNP.6:14853795 chr06:014853795 0 W/14853795-14853795 FN1455-S Single Base Substitution A-G INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN-215.SNP.6:14853821 chr06:014853821 0 W/14853821-14853821 FN-215 Single Base Substitution G-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. W706-3-1.SNP.6:14855469 chr06:014855469 0 W/14855469-14855469 W706-3-1 Single Base Substitution G-C INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN429-S.SNP.6:14857884 chr06:014857884 0 W/14857884-14857884 FN429-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1285-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN1285-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1351-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN1351-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1509-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN1509-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1576-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN1576-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os06g25370 retrotransposon protein, putative, unclassified SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2267-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN2267-S SNP C -> T AC=2;AN=190;BQB=0.998933;DP=4538;DP4=1973,2003,22,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.96667e-15;MQSB=0.0101723;RPB=0.808755;SGB=39.8503;VDB=0.610526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN2667-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN2667-S SNP C -> T AC=2;AN=200;BQB=0.994834;DP=4722;DP4=2034,2317,22,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.54705e-20;MQSB=0.404759;RPB=0.866079;SGB=183.209;VDB=0.304539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN3039-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.59236;DP=3748;DP4=1433,2086,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.51925e-09;MQSB=0.476769;RPB=0.846216;SGB=14.4113;VDB=0.872734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN3716-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.971124;DP=3183;DP4=1209,1750,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99734e-09;MQSB=0.354724;RPB=0.248073;SGB=46.7622;VDB=0.299629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN3796-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN3796-S SNP C -> T AC=2;AN=190;BQB=0.999965;DP=3569;DP4=1299,2056,7,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.85285e-12;MQSB=0.431527;RPB=0.733744;SGB=117.403;VDB=0.0838159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN3913-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN3913-S SNP C -> T AC=2;AN=158;BQB=0.743695;DP=2911;DP4=1075,1613,15,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.39821e-22;MQSB=0.376386;RPB=0.911122;SGB=92.5327;VDB=0.366424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P564S|607|LOC_Os06g25370|protein_coding|CODING|LOC_Os06g25370.1|3|1) FN917-S.SNP.6:14860784 chr06:014860784 0 W/14860784-14860784 FN917-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN-328.SNP.6:14861659 chr06:014861659 0 W/14861659-14861659 FN-328 Single Base Substitution A-G INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN798-S.SNP.6:14868030 chr06:014868030 0 W/14868030-14868030 FN798-S Single Base Substitution T-A INTERGENIC HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-75.SNP.6:14868735 chr06:014868735 0 W/14868735-14868735 FN-75 Single Base Substitution G-A INTERGENIC HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN4072-S.SNP.6:14872942 chr06:014872942 0 W/14872942-14872942 FN4072-S SNP G -> A AC=2;AN=182;BQB=0.882876;DP=2732;DP4=1335,1254,14,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.90734e-11;MQSB=0.845783;RPB=0.356014;SGB=40.7201;VDB=0.398936;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.6:14874960 chr06:014874960 0 W/14874960-14874960 FN517-S Single Base Substitution G-A INTERGENIC HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3533-S.SNP.6:14875099 chr06:014875099 0 W/14875099-14875099 FN3533-S SNP C -> T AC=1;AN=188;BQB=0.996511;DP=3344;DP4=1397,1892,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65452e-05;MQSB=0.731047;RPB=0.392113;SGB=35.3493;VDB=0.248249;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.6:14879282 chr06:014879282 0 W/14879282-14879282 FN-339 Single Base Substitution C-G INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1231-S.SNP.6:14883702 chr06:014883702 0 W/14883702-14883702 FN1231-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN2200-S.SNP.6:14890371 chr06:014890371 0 W/14890371-14890371 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.00371735;DP=4446;DP4=2062,2019,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000367456;MQSB=0.252437;RPB=0.41741;SGB=-16.5452;VDB=0.926208;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.6:14890602 chr06:014890602 0 W/14890602-14890602 FN1718-S SNP A -> T AC=1;AN=188;BQB=0.285125;DP=3639;DP4=2054,1555,16,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.62349e-07;MQSB=0.99903;RPB=0.383487;SGB=-37.3645;VDB=0.622148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.6:14891183 chr06:014891183 0 W/14891183-14891183 FN1703-S SNP C -> T AC=2;AN=188;BQB=0.963666;DP=3615;DP4=1736,1825,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.66769e-09;MQSB=0.892072;RPB=0.0319816;SGB=80.782;VDB=0.130609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.6:14892632 chr06:014892632 0 W/14892632-14892632 FN1363-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN_N1-116-1.SNP.6:14895775 chr06:014895775 0 W/14895775-14895775 FN_N1-116-1 Single Base Substitution A-G Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN3901-S.SNP.6:14900268 chr06:014900268 0 W/14900268-14900268 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.999974;DP=2587;DP4=1343,1148,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.19836e-07;MQSB=0.695106;RPB=0.742175;SGB=55.806;VDB=0.353483;EFF=INTRON(MODIFIER||||76|LOC_Os06g25500|protein_coding|CODING|LOC_Os06g25500.1|5|1) FN1441-S.SNP.6:14910874 chr06:014910874 0 W/14910874-14910874 FN1441-S Single Base Substitution C-A INTRON HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2424.SNP.6:14913720 chr06:014913720 0 W/14913720-14913720 FN2424 SNP G -> T AC=1;AN=200;BQB=0.500239;DP=4300;DP4=2225,1803,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72936e-11;MQSB=0.964435;RPB=0.995824;SGB=86.5007;VDB=0.427788;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.6:14925277 chr06:014925277 0 W/14925277-14925277 FN_N1-150-1 Single Base Substitution C-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1435-S.SNP.6:14926255 chr06:014926255 0 W/14926255-14926255 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1048-S.SNP.6:14927524 chr06:014927524 0 W/14927524-14927524 FN1048-S Single Base Substitution T-A INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN244-S.SNP.6:14929312 chr06:014929312 0 W/14929312-14929312 FN244-S Single Base Substitution G-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN952-S.SNP.6:14930447 chr06:014930447 0 W/14930447-14930447 FN952-S Single Base Substitution C-T INTRON HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3855-S.SNP.6:14935493 chr06:014935493 0 W/14935493-14935493 FN3855-S SNP C -> T AC=2;AN=158;BQB=0.857755;DP=2604;DP4=1303,1187,13,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.90438e-17;MQSB=0.990859;RPB=0.631239;SGB=125.717;VDB=0.461595;EFF=INTRON(MODIFIER||||419|LOC_Os06g25540|protein_coding|CODING|LOC_Os06g25540.1|1|1) FN3852-S.SNP.6:14941767 chr06:014941767 0 W/14941767-14941767 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.745198;DP=2667;DP4=1209,1350,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00061537;MQSB=0.999161;RPB=0.200375;SGB=20.5959;VDB=0.0363572;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.6:14946703 chr06:014946703 0 W/14946703-14946703 FN702-S Single Base Substitution C-T INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN-275.SNP.6:14951068 chr06:014951068 0 W/14951068-14951068 FN-275 Single Base Substitution A-G INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3523-S.SNP.6:14953137 chr06:014953137 0 W/14953137-14953137 FN3523-S SNP T -> C AC=1;AN=188;BQB=0.932705;DP=2839;DP4=1425,1339,16,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20706e-12;MQSB=0.779079;RPB=0.818565;SGB=60.7873;VDB=0.11249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.6:14954267 chr06:014954267 0 W/14954267-14954267 FN2581-S SNP G -> C AC=2;AN=198;BQB=0.999976;DP=4109;DP4=2024,1739,13,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.36522e-15;MQSB=0.99417;RPB=0.79516;SGB=60.4858;VDB=0.757055;EFF=INTERGENIC(MODIFIER||||||||||1) FN-69.SNP.6:14958271 chr06:014958271 0 W/14958271-14958271 FN-69 Single Base Substitution T-C INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN939-S.SNP.6:14970087 chr06:014970087 0 W/14970087-14970087 FN939-S Single Base Substitution C-T INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN3426-S.SNP.6:14971396 chr06:014971396 0 W/14971396-14971396 FN3426-S SNP T -> A AC=1;AN=184;BQB=0.953164;DP=2867;DP4=1353,1423,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46235e-07;MQSB=0.912264;RPB=0.87081;SGB=44.2207;VDB=0.91834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.6:14974585 chr06:014974585 0 W/14974585-14974585 FN2470 SNP T -> C AC=1;AN=200;BQB=0.682784;DP=3257;DP4=1461,1491,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76736e-07;MQSB=0.619405;RPB=0.255985;SGB=49.6594;VDB=0.0516518;EFF=UTR_5_PRIME(MODIFIER||199||104|LOC_Os06g25605|protein_coding|CODING|LOC_Os06g25605.1|1|1) FN1299-S.SNP.6:14978652 chr06:014978652 0 W/14978652-14978652 FN1299-S Single Base Substitution C-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1299-S.SNP.6:14978653 chr06:014978653 0 W/14978653-14978653 FN1299-S Single Base Substitution G-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2191-S.SNP.6:14982660 chr06:014982660 0 W/14982660-14982660 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.0302034;DP=4735;DP4=2144,2299,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.62123e-10;MQSB=0.775179;RPB=0.0464904;SGB=-39.8934;VDB=0.575892;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q111*|143|LOC_Os06g25620|protein_coding|CODING|LOC_Os06g25620.1|2|1) FN-377.SNP.6:14987037 chr06:014987037 0 W/14987037-14987037 FN-377 Single Base Substitution C-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN2279-S.SNP.6:14988154 chr06:014988154 0 W/14988154-14988154 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.955645;DP=4712;DP4=2222,2114,17,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.7953e-16;MQSB=0.978313;RPB=0.974383;SGB=85.8548;VDB=0.697401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G122D|131|LOC_Os06g25640|protein_coding|CODING|LOC_Os06g25640.1|1|1) FN1751-S.SNP.6:14993330 chr06:014993330 0 W/14993330-14993330 FN1751-S SNP G -> T AC=1;AN=188;BQB=0.0126322;DP=2824;DP4=1318,1462,5,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.86174e-08;MQSB=0.990035;RPB=0.135513;SGB=10.1681;VDB=0.482385;EFF=INTRON(MODIFIER||||571|LOC_Os06g25660|protein_coding|CODING|LOC_Os06g25660.1|4|1) FN471-S.SNP.6:14993930 chr06:014993930 0 W/14993930-14993930 FN471-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN793-S.SNP.6:15004165 chr06:015004165 0 W/15004165-15004165 FN793-S Single Base Substitution G-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3540-S.SNP.6:15005547 chr06:015005547 0 W/15005547-15005547 FN3540-S SNP C -> T AC=2;AN=188;BQB=0.859497;DP=3463;DP4=1761,1411,30,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.96165e-21;MQSB=0.00658877;RPB=0.36864;SGB=156.456;VDB=0.798544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.6:15006413 chr06:015006413 0 W/15006413-15006413 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.953892;DP=2934;DP4=1404,1411,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.85926e-07;MQSB=0.990359;RPB=0.992288;SGB=53.6492;VDB=0.176584;EFF=INTRON(MODIFIER||||327|LOC_Os06g25680|protein_coding|CODING|LOC_Os06g25680.1|5|1) FN-259.SNP.6:15019820 chr06:015019820 0 W/15019820-15019820 FN-259 Single Base Substitution G-A INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN-259.SNP.6:15019821 chr06:015019821 0 W/15019821-15019821 FN-259 Single Base Substitution T-A INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2275-S.SNP.6:15020809 chr06:015020809 0 W/15020809-15020809 FN2275-S SNP G -> A AC=2;AN=190;BQB=0.390253;DP=4611;DP4=2127,2050,39,45;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48898e-35;MQSB=0.993205;RPB=1;SGB=371.428;VDB=0.914256;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P73S|267|LOC_Os06g25720|protein_coding|CODING|LOC_Os06g25720.1|1|1) FN3637-S.SNP.6:15022314 chr06:015022314 0 W/15022314-15022314 FN3637-S SNP T -> C AC=2;AN=190;BQB=0.455105;DP=2719;DP4=1331,1261,17,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.80105e-07;MQSB=0.99765;RPB=0.540837;SGB=71.6393;VDB=0.524123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.6:15023416 chr06:015023416 0 W/15023416-15023416 FN3557-S SNP T -> C AC=1;AN=188;BQB=0.979214;DP=3006;DP4=1368,1526,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0123087;MQB=0.000269895;MQSB=0.000480269;RPB=0.383645;SGB=108.042;VDB=0.114986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.6:15023837 chr06:015023837 0 W/15023837-15023837 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.98804;DP=3139;DP4=1702,1374,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0178401;MQB=0.115723;MQSB=0.00022855;RPB=0.990323;SGB=93.9603;VDB=0.640955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.6:15026145 chr06:015026145 0 W/15026145-15026145 FN3828-S SNP C -> G AC=1;AN=190;BQB=0.42348;DP=2843;DP4=1435,1303,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0193458;MQB=0.106603;MQSB=0.00139403;RPB=0.699192;SGB=44.5415;VDB=0.777744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.6:15027769 chr06:015027769 0 W/15027769-15027769 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.852207;DP=4247;DP4=2210,1793,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.22604e-06;MQSB=0.351153;RPB=0.847037;SGB=25.7687;VDB=0.191017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A371V|1375|LOC_Os06g25730|protein_coding|CODING|LOC_Os06g25730.1|3|1) FN3105-S.SNP.6:15027955 chr06:015027955 0 W/15027955-15027955 FN3105-S SNP A -> G AC=1;AN=184;BQB=0.624929;DP=2876;DP4=1286,1484,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000738899;MQSB=0.401937;RPB=0.959515;SGB=39.2697;VDB=0.611175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E409G|1375|LOC_Os06g25730|protein_coding|CODING|LOC_Os06g25730.1|4|1) FN1473-S.SNP.6:15028041 chr06:015028041 0 W/15028041-15028041 FN1473-S Single Base Substitution G-A INTRON HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2324.SNP.6:15031930 chr06:015031930 0 W/15031930-15031930 FN2324 SNP C -> A AC=2;AN=192;BQB=0.843332;DP=4642;DP4=2141,2247,18,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.94201e-20;MQSB=0.886609;RPB=0.921722;SGB=90.4583;VDB=0.76274;EFF=SPLICE_SITE_REGION(LOW||||1375|LOC_Os06g25730|protein_coding|CODING|LOC_Os06g25730.1|8|1),INTRON(MODIFIER||||1375|LOC_Os06g25730|protein_coding|CODING|LOC_Os06g25730.1|8|1) FN4229-S.SNP.6:15035396 chr06:015035396 0 W/15035396-15035396 FN4229-S SNP A -> T AC=1;AN=170;BQB=0.99786;DP=1999;DP4=859,1064,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.432e-08;MQSB=0.970879;RPB=0.957293;SGB=34.878;VDB=0.439007;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.6:15037587 chr06:015037587 0 W/15037587-15037587 FN1302-S Single Base Substitution C-T INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN-142.SNP.6:15038282 chr06:015038282 0 W/15038282-15038282 FN-142 Single Base Substitution C-T INTERGENIC HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN1686-S.SNP.6:15041005 chr06:015041005 0 W/15041005-15041005 FN1686-S SNP C -> A AC=2;AN=188;BQB=0.995725;DP=3361;DP4=1458,1827,21,29;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00178518;MQB=5.4204e-11;MQSB=0.328213;RPB=0.768066;SGB=58.0102;VDB=0.569859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.6:15044528 chr06:015044528 0 W/15044528-15044528 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.808932;DP=5253;DP4=2642,2328,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.32811e-12;MQSB=0.795973;RPB=0.994928;SGB=39.9056;VDB=0.853922;EFF=INTERGENIC(MODIFIER||||||||||1) FN4152-S.SNP.6:15045627 chr06:015045627 0 W/15045627-15045627 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.95101;DP=2580;DP4=1158,1340,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.93752e-11;MQSB=0.300454;RPB=0.813032;SGB=62.4192;VDB=0.400559;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S103|1496|LOC_Os06g25760|protein_coding|CODING|LOC_Os06g25760.1|1|1) FN4075-S.SNP.6:15047445 chr06:015047445 0 W/15047445-15047445 FN4075-S SNP G -> A AC=1;AN=182;BQB=0.795993;DP=2932;DP4=1308,1547,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.23259e-07;MQSB=0.937572;RPB=0.312402;SGB=32.1169;VDB=0.263711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G330R|1496|LOC_Os06g25760|protein_coding|CODING|LOC_Os06g25760.1|4|1) FN543-S.SNP.6:15054009 chr06:015054009 0 W/15054009-15054009 FN543-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g25770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3687-S.SNP.6:15056285 chr06:015056285 0 W/15056285-15056285 FN3687-S SNP T -> A AC=2;AN=190;BQB=0.994769;DP=2844;DP4=1426,1301,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.32098e-09;MQSB=0.909981;RPB=0.368709;SGB=46.7622;VDB=0.643161;EFF=INTRON(MODIFIER||||918|LOC_Os06g25770|protein_coding|CODING|LOC_Os06g25770.1|1|1) FN3475-S.SNP.6:15066005 chr06:015066005 0 W/15066005-15066005 FN3475-S SNP C -> T AC=1;AN=184;BQB=0.347376;DP=3379;DP4=1427,1839,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.016573;MQB=6.96454e-06;MQSB=3.77325e-05;RPB=0.254348;SGB=23.2751;VDB=0.209748;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN-261 Single Base Substitution A-G INTRON HOMO SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN1048-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN1048-S Single Base Substitution A-G INTRON HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1204-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN1204-S Single Base Substitution A-G INTRON HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1297-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN1297-S Single Base Substitution A-G INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1566-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN1566-S Single Base Substitution A-G INTRON Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2449.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN2449 SNP A -> G AC=1;AN=200;BQB=0.750917;DP=4343;DP4=2106,1967,10,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00161179;MQB=7.00851e-06;MQSB=0.00558524;RPB=0.650152;SGB=72.6852;VDB=0.428746;EFF=INTRON(MODIFIER||||88|LOC_Os06g25790|protein_coding|CODING|LOC_Os06g25790.1|1|1) FN3358-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN3358-S SNP A -> G AC=2;AN=184;BQB=0.997493;DP=2739;DP4=1371,1212,10,15;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.00255568;MQB=0.00465414;MQSB=0.861248;RPB=0.985043;SGB=78.0093;VDB=0.759138;EFF=INTRON(MODIFIER||||88|LOC_Os06g25790|protein_coding|CODING|LOC_Os06g25790.1|1|1) FN369-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN369-S Single Base Substitution A-G INTRON HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN469-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN469-S Single Base Substitution A-G INTRON HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN477-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN477-S Single Base Substitution A-G INTRON HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN780-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN780-S Single Base Substitution A-G INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN853-S Single Base Substitution A-G INTRON HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 FN908-S Single Base Substitution A-G INTRON HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. W385-6-8-4.SNP.6:15066808 chr06:015066808 0 W/15066808-15066808 W385-6-8-4 Single Base Substitution A-G INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1222-S.SNP.6:15071260 chr06:015071260 0 W/15071260-15071260 FN1222-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1222-S.SNP.6:15071261 chr06:015071261 0 W/15071261-15071261 FN1222-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN929-S.SNP.6:15071679 chr06:015071679 0 W/15071679-15071679 FN929-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN446-S.SNP.6:15072886 chr06:015072886 0 W/15072886-15072886 FN446-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2731-S.SNP.6:15081276 chr06:015081276 0 W/15081276-15081276 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.999247;DP=4694;DP4=2462,1982,13,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00511291;MQB=0.0299036;MQSB=0.00769814;RPB=0.737839;SGB=17.5158;VDB=0.62346;EFF=INTRON(MODIFIER||||1538|LOC_Os06g25810|protein_coding|CODING|LOC_Os06g25810.1|1|1) FN666-S.SNP.6:15087664 chr06:015087664 0 W/15087664-15087664 FN666-S Single Base Substitution A-C INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3324-S.SNP.6:15090102 chr06:015090102 0 W/15090102-15090102 FN3324-S SNP G -> C AC=2;AN=184;BQB=0.999934;DP=3358;DP4=1796,1407,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000297796;MQB=2.88962e-12;MQSB=0.94286;RPB=0.88378;SGB=15.9331;VDB=0.0372541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Gcg|P66A|279|LOC_Os06g25830|protein_coding|CODING|LOC_Os06g25830.1|1|1) FN3979-S.SNP.6:15091270 chr06:015091270 0 W/15091270-15091270 FN3979-S SNP A -> G AC=1;AN=168;BQB=0.945639;DP=2731;DP4=1366,1226,16,8;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0252655;MQB=0.926375;MQSB=0.999984;RPB=0.987037;SGB=72.4869;VDB=0.774862;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.6:15093261 chr06:015093261 0 W/15093261-15093261 FN856-S Single Base Substitution C-T INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2426.SNP.6:15093295 chr06:015093295 0 W/15093295-15093295 FN2426 SNP G -> A AC=1;AN=200;BQB=0.821703;DP=4466;DP4=2237,1981,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07714e-10;MQSB=0.533283;RPB=0.997899;SGB=68.0801;VDB=0.58783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.6:15097722 chr06:015097722 0 W/15097722-15097722 FN-221 Single Base Substitution G-A INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN-396.SNP.6:15098598 chr06:015098598 0 W/15098598-15098598 FN-396 Single Base Substitution A-C INTERGENIC HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN-83.SNP.6:15106760 chr06:015106760 0 W/15106760-15106760 FN-83 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g25850 retrotransposon protein, putative, unclassified, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN2562-S.SNP.6:15109188 chr06:015109188 0 W/15109188-15109188 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.953213;DP=3915;DP4=1929,1721,16,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.74071e-15;MQSB=0.177852;RPB=0.183362;SGB=141.451;VDB=0.206353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.6:15109351 chr06:015109351 0 W/15109351-15109351 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.714767;DP=4540;DP4=2026,2215,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=8.23135e-05;MQSB=1.54585e-11;RPB=0.113931;SGB=11.8805;VDB=0.199137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.6:15110570 chr06:015110570 0 W/15110570-15110570 FN2289 SNP G -> A AC=1;AN=192;BQB=0.781357;DP=4837;DP4=2246,2282,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.49324e-17;MQSB=0.932447;RPB=0.964493;SGB=30.82;VDB=0.939522;EFF=INTRON(MODIFIER||||325|LOC_Os06g25860|protein_coding|CODING|LOC_Os06g25860.1|2|1) FN430-S.SNP.6:15111754 chr06:015111754 0 W/15111754-15111754 FN430-S Single Base Substitution G-A INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN_N2-29a-1.SNP.6:15114043 chr06:015114043 0 W/15114043-15114043 FN_N2-29a-1 Single Base Substitution G-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN1618-S.SNP.6:15114125 chr06:015114125 0 W/15114125-15114125 FN1618-S Single Base Substitution A-G INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2545-S.SNP.6:15114655 chr06:015114655 0 W/15114655-15114655 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.0717695;DP=4204;DP4=1928,2027,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00475737;MQB=2.85737e-09;MQSB=0.696767;RPB=0.827864;SGB=31.9395;VDB=0.170987;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.6:15121095 chr06:015121095 0 W/15121095-15121095 FN751-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g25880 retrotransposon protein, putative, unclassified, expressed SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN988-S.SNP.6:15122953 chr06:015122953 0 W/15122953-15122953 FN988-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN533-S.SNP.6:15124154 chr06:015124154 0 W/15124154-15124154 FN533-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g25880 retrotransposon protein, putative, unclassified, expressed SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. W426-1-1.SNP.6:15125109 chr06:015125109 0 W/15125109-15125109 W426-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN2464.SNP.6:15128005 chr06:015128005 0 W/15128005-15128005 FN2464 SNP C -> T AC=1;AN=200;BQB=0.549313;DP=4002;DP4=1928,1726,7,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0187406;MQB=0.000388684;MQSB=7.85535e-09;RPB=0.901371;SGB=1.46408;VDB=0.386524;EFF=INTERGENIC(MODIFIER||||||||||1) FN4144-S.SNP.6:15128792 chr06:015128792 0 W/15128792-15128792 FN4144-S SNP G -> A AC=1;AN=170;BQB=0.848005;DP=1741;DP4=946,607,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.00193974;MQSB=5.15217e-08;RPB=0.992332;SGB=47.8722;VDB=0.328773;EFF=INTERGENIC(MODIFIER||||||||||1) FN894-S.SNP.6:15128866 chr06:015128866 0 W/15128866-15128866 FN894-S Single Base Substitution C-A INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1641-S.SNP.6:15131106 chr06:015131106 0 W/15131106-15131106 FN1641-S Single Base Substitution G-T INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2461.SNP.6:15134547 chr06:015134547 0 W/15134547-15134547 FN2461 SNP T -> C AC=2;AN=200;BQB=0.0260349;DP=4527;DP4=2006,2058,20,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.28297e-13;MQSB=0.950428;RPB=0.370412;SGB=76.378;VDB=0.0764507;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.6:15137609 chr06:015137609 0 W/15137609-15137609 FN3840-S SNP C -> T AC=2;AN=190;BQB=0.542066;DP=3101;DP4=1514,1417,20,17;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0503064;MQB=0.409744;MQSB=1.55002e-12;RPB=0.537438;SGB=121.394;VDB=0.147977;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.6:15143487 chr06:015143487 0 W/15143487-15143487 FN4064-S SNP G -> C AC=1;AN=168;BQB=0.853502;DP=3294;DP4=1666,1529,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.033394;MQB=0.88981;MQSB=0;RPB=0.51143;SGB=47.7421;VDB=0.242177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V1538L|1567|LOC_Os06g25890|protein_coding|CODING|LOC_Os06g25890.1|3|1) FN3285-S.SNP.6:15143508 chr06:015143508 0 W/15143508-15143508 FN3285-S SNP G -> T AC=2;AN=184;BQB=0.902462;DP=3836;DP4=1911,1765,19,25;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0411887;MQB=9.01448e-12;MQSB=0;RPB=0.904703;SGB=-146.175;VDB=0.45022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A1545S|1567|LOC_Os06g25890|protein_coding|CODING|LOC_Os06g25890.1|3|1) FN3285-S.SNP.6:15143509 chr06:015143509 0 W/15143509-15143509 FN3285-S SNP C -> T AC=2;AN=184;BQB=0.98574;DP=3834;DP4=1940,1758,17,19;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.041471;MQB=2.00267e-09;MQSB=0;RPB=0.865671;SGB=157.265;VDB=0.324235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1545V|1567|LOC_Os06g25890|protein_coding|CODING|LOC_Os06g25890.1|3|1) FN2734-S.SNP.6:15148376 chr06:015148376 0 W/15148376-15148376 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.00817741;DP=4833;DP4=2432,2178,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.19739e-12;MQSB=0.994779;RPB=0.406658;SGB=34.6953;VDB=0.436514;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I620T|727|LOC_Os06g25900|protein_coding|CODING|LOC_Os06g25900.1|5|1) FN2486.SNP.6:15149842 chr06:015149842 0 W/15149842-15149842 FN2486 SNP A -> G AC=1;AN=200;BQB=0.908583;DP=4886;DP4=2124,2464,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.30337e-08;MQSB=0.998795;RPB=0.848524;SGB=40.2696;VDB=0.242693;EFF=INTRON(MODIFIER||||727|LOC_Os06g25900|protein_coding|CODING|LOC_Os06g25900.1|3|1) FN3369-S.SNP.6:15150951 chr06:015150951 0 W/15150951-15150951 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.986003;DP=3056;DP4=1503,1409,10,19;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=9.00477e-12;MQSB=0.995438;RPB=0.183912;SGB=92.0965;VDB=0.751975;EFF=SPLICE_SITE_DONOR(HIGH||||727|LOC_Os06g25900|protein_coding|CODING|LOC_Os06g25900.1|2|1),INTRON(MODIFIER||||727|LOC_Os06g25900|protein_coding|CODING|LOC_Os06g25900.1|2|1);LOF=(LOC_Os06g25900|LOC_Os06g25900|1|1.00) FN1660-S.SNP.6:15154401 chr06:015154401 0 W/15154401-15154401 FN1660-S Single Base Substitution T-C INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1443-S.SNP.6:15157477 chr06:015157477 0 W/15157477-15157477 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN507-S.SNP.6:15158840 chr06:015158840 0 W/15158840-15158840 FN507-S Single Base Substitution C-A INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN3426-S.SNP.6:15160345 chr06:015160345 0 W/15160345-15160345 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.749846;DP=2996;DP4=1575,1360,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=19;MQ0F=0.188919;MQB=0.391206;MQSB=5.15849e-24;RPB=0.814643;SGB=32.2261;VDB=0.248536;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1010*|1382|LOC_Os06g25910|protein_coding|CODING|LOC_Os06g25910.1|1|1) FN_788-1-1.SNP.6:15164822 chr06:015164822 0 W/15164822-15164822 FN_788-1-1 Single Base Substitution A-C HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2704-S.SNP.6:15165863 chr06:015165863 0 W/15165863-15165863 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.989091;DP=4902;DP4=2258,2426,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000228192;MQSB=0.996877;RPB=0.969928;SGB=6.03876;VDB=0.70846;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.6:15166475 chr06:015166475 0 W/15166475-15166475 FN859-S Single Base Substitution A-C INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN726-S.SNP.6:15166723 chr06:015166723 0 W/15166723-15166723 FN726-S Single Base Substitution T-G INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1339-S.SNP.6:15171345 chr06:015171345 0 W/15171345-15171345 FN1339-S Single Base Substitution G-A INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3516-S.SNP.6:15172118 chr06:015172118 0 W/15172118-15172118 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.751565;DP=3165;DP4=1588,1494,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000582305;MQSB=0.480631;RPB=0.606852;SGB=35.3493;VDB=0.224157;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.6:15181615 chr06:015181615 0 W/15181615-15181615 FN-103 Single Base Substitution T-C INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN1548-S.SNP.6:15181722 chr06:015181722 0 W/15181722-15181722 FN1548-S SNP A -> G AC=1;AN=188;BQB=0.998095;DP=2132;DP4=949,1139,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00204118;MQSB=0.986066;RPB=0.505046;SGB=5.73019;VDB=0.380458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.6:15187006 chr06:015187006 0 W/15187006-15187006 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.409172;DP=3944;DP4=2009,1716,17,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.13867e-23;MQSB=0.997557;RPB=0.999831;SGB=169.022;VDB=0.115161;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.6:15193752 chr06:015193752 0 W/15193752-15193752 FN774-S Single Base Substitution T-G INTRON HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2467.SNP.6:15195091 chr06:015195091 0 W/15195091-15195091 FN2467 SNP A -> T AC=1;AN=200;BQB=0.601839;DP=4639;DP4=2298,2003,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.41371e-11;MQSB=0.997928;RPB=0.99571;SGB=58.2954;VDB=0.553344;EFF=INTRON(MODIFIER||||327|LOC_Os06g25950|protein_coding|CODING|LOC_Os06g25950.1|1|1) FN2260-S.SNP.6:15196141 chr06:015196141 0 W/15196141-15196141 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.579332;DP=5378;DP4=2369,2579,20,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.9192e-18;MQSB=0.538319;RPB=0.397594;SGB=-2.14444;VDB=0.606675;EFF=INTRON(MODIFIER||||327|LOC_Os06g25950|protein_coding|CODING|LOC_Os06g25950.1|1|1) FN-122.SNP.6:15198267 chr06:015198267 0 W/15198267-15198267 FN-122 Single Base Substitution A-C INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2628-S.SNP.6:15198562 chr06:015198562 0 W/15198562-15198562 FN2628-S SNP G -> A AC=1;AN=200;BQB=0.901778;DP=4768;DP4=2165,2277,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20537e-11;MQSB=0.724331;RPB=0.281189;SGB=95.7111;VDB=0.332573;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.6:15199099 chr06:015199099 0 W/15199099-15199099 FN1200-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g25960 hypothetical protein SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN574-S.SNP.6:15203547 chr06:015203547 0 W/15203547-15203547 FN574-S Single Base Substitution T-G INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2428.SNP.6:15203911 chr06:015203911 0 W/15203911-15203911 FN2428 SNP A -> G AC=1;AN=200;BQB=0.80789;DP=4695;DP4=2168,2249,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212993;MQB=1.61054e-09;MQSB=0.470884;RPB=0.980628;SGB=51.0851;VDB=0.280002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.6:15204492 chr06:015204492 0 W/15204492-15204492 FN1443-S Single Base Substitution T-C INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN-283.SNP.6:15204840 chr06:015204840 0 W/15204840-15204840 FN-283 Single Base Substitution A-C INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2650-S.SNP.6:15215936 chr06:015215936 0 W/15215936-15215936 FN2650-S SNP G -> C AC=1;AN=200;BQB=0.93247;DP=4545;DP4=2290,2011,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.305e-11;MQSB=0.927322;RPB=0.915918;SGB=-12.5051;VDB=0.729449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.6:15216255 chr06:015216255 0 W/15216255-15216255 FN1106-S Single Base Substitution C-G INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2640-S.SNP.6:15218204 chr06:015218204 0 W/15218204-15218204 FN2640-S SNP T -> A AC=1;AN=200;BQB=0.778673;DP=4363;DP4=2165,2029,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.69425e-10;MQSB=0.0168346;RPB=0.633315;SGB=29.4849;VDB=0.348925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.6:15218354 chr06:015218354 0 W/15218354-15218354 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.921941;DP=3783;DP4=1959,1623,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.91954e-07;MQSB=0.813275;RPB=0.603925;SGB=29.3637;VDB=0.606998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.6:15220357 chr06:015220357 0 W/15220357-15220357 FN3956-S SNP T -> C AC=1;AN=168;BQB=0.930266;DP=2765;DP4=1111,1552,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48349e-06;MQSB=0.946127;RPB=0.992639;SGB=31.3172;VDB=0.0436431;EFF=INTRON(MODIFIER||||465|LOC_Os06g25990|protein_coding|CODING|LOC_Os06g25990.1|2|1) FN2582-S.SNP.6:15222675 chr06:015222675 0 W/15222675-15222675 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.990975;DP=4092;DP4=1792,2001,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000941528;MQSB=0.921715;RPB=0.863767;SGB=14.9842;VDB=0.907611;EFF=INTRON(MODIFIER||||465|LOC_Os06g25990|protein_coding|CODING|LOC_Os06g25990.1|1|1) FN2292.SNP.6:15245702 chr06:015245702 0 W/15245702-15245702 FN2292 SNP C -> G AC=1;AN=192;BQB=0.295039;DP=4848;DP4=2132,2365,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206271;MQB=1.0357e-09;MQSB=0.618002;RPB=0.964101;SGB=10.4835;VDB=0.79112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.6:15257373 chr06:015257373 0 W/15257373-15257373 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.937853;DP=2464;DP4=1092,1290,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000405844;MQB=6.99232e-13;MQSB=0.971495;RPB=0.96795;SGB=89.8686;VDB=0.798526;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G98|1056|LOC_Os06g26070|protein_coding|CODING|LOC_Os06g26070.1|1|1) FN3626-S.SNP.6:15257654 chr06:015257654 0 W/15257654-15257654 FN3626-S SNP A -> G AC=2;AN=190;BQB=0.609894;DP=2870;DP4=1473,1284,15,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.6497e-13;MQSB=0.441038;RPB=0.542434;SGB=89.4087;VDB=0.369566;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q192R|1056|LOC_Os06g26070|protein_coding|CODING|LOC_Os06g26070.1|1|1) W577-3-1.SNP.6:15259011 chr06:015259011 0 W/15259011-15259011 W577-3-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g26070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2491.SNP.6:15260964 chr06:015260964 0 W/15260964-15260964 FN2491 SNP G -> C AC=1;AN=200;BQB=0.565152;DP=4666;DP4=2246,2169,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15203e-11;MQSB=0.97421;RPB=0.992315;SGB=42.5108;VDB=0.353191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.6:15264743 chr06:015264743 0 W/15264743-15264743 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.989198;DP=4812;DP4=2299,2127,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40496e-10;MQSB=0.351235;RPB=0.811825;SGB=71.8647;VDB=0.251713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.6:15266175 chr06:015266175 0 W/15266175-15266175 FN1600-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g26080 expressed protein SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN4080-S.SNP.6:15271625 chr06:015271625 0 W/15271625-15271625 FN4080-S SNP T -> A AC=2;AN=182;BQB=0.852393;DP=3677;DP4=1871,1671,10,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.07729e-10;MQSB=0.982016;RPB=0.916683;SGB=60.2037;VDB=0.766704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N742Y|923|LOC_Os06g26100|protein_coding|CODING|LOC_Os06g26100.1|9|1) FN418-S.SNP.6:15273057 chr06:015273057 0 W/15273057-15273057 FN418-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g26100 retrotransposon protein, putative, unclassified, expressed SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1097-S.SNP.6:15273652 chr06:015273652 0 W/15273652-15273652 FN1097-S Single Base Substitution G-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2488.SNP.6:15276078 chr06:015276078 0 W/15276078-15276078 FN2488 SNP C -> G AC=2;AN=200;BQB=0.252749;DP=4117;DP4=1779,2038,13,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12556e-11;MQSB=0.796255;RPB=0.926767;SGB=50.3263;VDB=0.976132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D293H|417|LOC_Os06g26110|protein_coding|CODING|LOC_Os06g26110.1|3|1) FN1504-S.SNP.6:15276801 chr06:015276801 0 W/15276801-15276801 FN1504-S Single Base Substitution A-G INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2488.SNP.6:15278476 chr06:015278476 0 W/15278476-15278476 FN2488 SNP G -> A AC=2;AN=200;BQB=0.940965;DP=4235;DP4=1967,1796,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.5293e-23;MQSB=0.999176;RPB=0.251719;SGB=-44.7915;VDB=0.738138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.6:15286086 chr06:015286086 0 W/15286086-15286086 FN2458 SNP G -> T AC=2;AN=200;BQB=0.948079;DP=5117;DP4=2609,2192,29,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00136799;MQB=3.01194e-26;MQSB=0.416728;RPB=0.932625;SGB=155.635;VDB=0.274022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.6:15286089 chr06:015286089 0 W/15286089-15286089 FN2458 SNP G -> A AC=2;AN=200;BQB=0.973061;DP=5139;DP4=2614,2198,27,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00136213;MQB=8.92984e-26;MQSB=0.273316;RPB=0.984355;SGB=192.42;VDB=0.326568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.6:15288932 chr06:015288932 0 W/15288932-15288932 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.977338;DP=2783;DP4=1367,1326,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.59791e-07;MQSB=0.981106;RPB=0.9094;SGB=32.2261;VDB=0.0607873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.6:15290963 chr06:015290963 0 W/15290963-15290963 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.994997;DP=4912;DP4=2259,2381,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02428e-13;MQSB=0.992919;RPB=0.529329;SGB=65.9573;VDB=0.917233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P302S|577|LOC_Os06g26130|protein_coding|CODING|LOC_Os06g26130.1|3|1) FN952-S.SNP.6:15291312 chr06:015291312 0 W/15291312-15291312 FN952-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1195-S.SNP.6:15291845 chr06:015291845 0 W/15291845-15291845 FN1195-S Single Base Substitution C-A INTRON HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN509-S.SNP.6:15295148 chr06:015295148 0 W/15295148-15295148 FN509-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g26140 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2556-S.SNP.6:15295217 chr06:015295217 0 W/15295217-15295217 FN2556-S SNP C -> G AC=1;AN=198;BQB=0.234501;DP=4111;DP4=1898,1991,18,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.69637e-17;MQSB=0.812962;RPB=0.979345;SGB=-85.1135;VDB=0.315674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q114E|210|LOC_Os06g26140|protein_coding|CODING|LOC_Os06g26140.1|3|1) FN2765-S.SNP.6:15301990 chr06:015301990 0 W/15301990-15301990 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.235528;DP=3921;DP4=1767,1825,8,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000255037;MQB=1.03059e-11;MQSB=0.312179;RPB=0.978278;SGB=20.5152;VDB=0.125199;EFF=INTRON(MODIFIER||||1612|LOC_Os06g26150|protein_coding|CODING|LOC_Os06g26150.1|1|1) FN4036-S.SNP.6:15302800 chr06:015302800 0 W/15302800-15302800 FN4036-S SNP A -> T AC=1;AN=168;BQB=0.883961;DP=2719;DP4=1397,1197,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08609e-12;MQSB=0.835571;RPB=0.955331;SGB=58.7637;VDB=0.389733;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.6:15302885 chr06:015302885 0 W/15302885-15302885 FN1325-S Single Base Substitution C-T INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3449-S.SNP.6:15310439 chr06:015310439 0 W/15310439-15310439 FN3449-S SNP T -> A AC=1;AN=184;BQB=0.654607;DP=2743;DP4=1507,1160,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00224589;MQSB=0.906079;RPB=0.969268;SGB=30.6558;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.6:15324241 chr06:015324241 0 W/15324241-15324241 FN3676-S SNP G -> A AC=2;AN=190;BQB=0.6251;DP=2644;DP4=1241,1270,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.71333e-15;MQSB=0.99917;RPB=0.911246;SGB=92.9626;VDB=0.970987;EFF=INTRON(MODIFIER||||231|LOC_Os06g26190|protein_coding|CODING|LOC_Os06g26190.1|3|1) FN981-S.SNP.6:15326677 chr06:015326677 0 W/15326677-15326677 FN981-S Single Base Substitution T-A INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1482-S.SNP.6:15330641 chr06:015330641 0 W/15330641-15330641 FN1482-S Single Base Substitution A-G INTRON Homo SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN2677-S.SNP.6:15332638 chr06:015332638 0 W/15332638-15332638 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.790979;DP=4892;DP4=2408,2235,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204415;MQB=1.11188e-11;MQSB=0.628822;RPB=0.437296;SGB=58.2954;VDB=0.613444;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.6:15333830 chr06:015333830 0 W/15333830-15333830 FN2639-S SNP C -> A AC=1;AN=200;BQB=0.99555;DP=4731;DP4=2415,2025,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58491e-17;MQSB=0.978176;RPB=0.984912;SGB=55.5366;VDB=0.0671729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.6:15339830 chr06:015339830 0 W/15339830-15339830 FN3396-S SNP C -> T AC=1;AN=184;BQB=0.998883;DP=2226;DP4=1024,1157,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13133e-07;MQSB=0.998774;RPB=0.872524;SGB=44.2207;VDB=0.00745627;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q191*|903|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.1|4|1),STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q191*|903|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.2|4|1),STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q64*|776|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.3|2|1);LOF=(LOC_Os06g26234|LOC_Os06g26234|3|1.00);NMD=(LOC_Os06g26234|LOC_Os06g26234|3|1.00) FN_N1-220-1.SNP.6:15342888 chr06:015342888 0 W/15342888-15342888 FN_N1-220-1 Single Base Substitution G-A HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN399-S.SNP.6:15352989 chr06:015352989 0 W/15352989-15352989 FN399-S Single Base Substitution G-A INTRON HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1657-S.SNP.6:15358021 chr06:015358021 0 W/15358021-15358021 FN1657-S Single Base Substitution C-A INTRON HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3920-S.SNP.6:15361854 chr06:015361854 0 W/15361854-15361854 FN3920-S SNP C -> T AC=2;AN=158;BQB=0.995062;DP=2301;DP4=920,1272,8,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.10997e-13;MQSB=0.798291;RPB=0.0869781;SGB=77.8763;VDB=0.575106;EFF=INTRON(MODIFIER||||903|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.1|17|1),INTRON(MODIFIER||||903|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.2|17|1),INTRON(MODIFIER||||776|LOC_Os06g26234|protein_coding|CODING|LOC_Os06g26234.3|15|1) FN3373-S.SNP.6:15365552 chr06:015365552 0 W/15365552-15365552 FN3373-S SNP G -> C AC=1;AN=184;BQB=0.985338;DP=3226;DP4=1398,1648,13,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.74067e-16;MQSB=0.868605;RPB=0.648361;SGB=23.542;VDB=0.912078;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.6:15366161 chr06:015366161 0 W/15366161-15366161 FN890-S Single Base Substitution C-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2631-S.SNP.6:15370066 chr06:015370066 0 W/15370066-15370066 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.985485;DP=5176;DP4=2719,2185,22,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2803e-21;MQSB=0.972289;RPB=0.999996;SGB=160.183;VDB=0.733821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.6:15371710 chr06:015371710 0 W/15371710-15371710 FN2136-S SNP A -> T AC=1;AN=168;BQB=0.135448;DP=3009;DP4=1273,1686,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.60569e-13;MQSB=0.971439;RPB=0.578569;SGB=-77.4832;VDB=0.0635981;EFF=INTERGENIC(MODIFIER||||||||||1) FN4201-S.SNP.6:15377888 chr06:015377888 0 W/15377888-15377888 FN4201-S SNP A -> C AC=2;AN=170;BQB=0.495711;DP=2516;DP4=990,1426,13,22;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=4.53767e-14;MQSB=0.0029564;RPB=0.97789;SGB=110.616;VDB=0.960419;EFF=INTRON(MODIFIER||||671|LOC_Os06g26260|protein_coding|CODING|LOC_Os06g26260.1|5|1) FN3698-S.SNP.6:15384414 chr06:015384414 0 W/15384414-15384414 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.882938;DP=2702;DP4=865,1725,1,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59003e-08;MQSB=0.87453;RPB=0.488154;SGB=58.2031;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.6:15391269 chr06:015391269 0 W/15391269-15391269 FN776-S Single Base Substitution A-C INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN2360.SNP.6:15393210 chr06:015393210 0 W/15393210-15393210 FN2360 SNP C -> G AC=1;AN=192;BQB=0.00151791;DP=4831;DP4=2225,2363,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00786587;MQB=4.79183e-07;MQSB=0.2019;RPB=0.624918;SGB=54.0374;VDB=0.451571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.6:15394973 chr06:015394973 0 W/15394973-15394973 FN2304 SNP T -> C AC=1;AN=192;BQB=0.892912;DP=4808;DP4=2322,2213,21,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.30503e-21;MQSB=0.800602;RPB=0.995067;SGB=167.883;VDB=0.206632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.6:15403490 chr06:015403490 0 W/15403490-15403490 FN1263-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2091-S.SNP.6:15404010 chr06:015404010 0 W/15404010-15404010 FN2091-S SNP T -> G AC=2;AN=168;BQB=0.534692;DP=1579;DP4=537,968,8,19;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0234326;MQB=0.82348;MQSB=9.23302e-05;RPB=0.0371679;SGB=5.33385;VDB=0.109535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.6:15407408 chr06:015407408 0 W/15407408-15407408 FN2385 SNP T -> A AC=1;AN=192;BQB=0.0864528;DP=5103;DP4=2525,2256,17,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000195963;MQB=1.22412e-19;MQSB=0.688096;RPB=0.59467;SGB=118.196;VDB=0.3097;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.6:15409294 chr06:015409294 0 W/15409294-15409294 FN597-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g26320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2194-S.SNP.6:15414636 chr06:015414636 0 W/15414636-15414636 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.5934;DP=4825;DP4=2049,2320,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207254;MQB=1.39697e-12;MQSB=0.744115;RPB=0.949755;SGB=67.0756;VDB=0.400626;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.6:15414759 chr06:015414759 0 W/15414759-15414759 FN-226 Single Base Substitution A-C INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1302-S.SNP.6:15416478 chr06:015416478 0 W/15416478-15416478 FN1302-S Single Base Substitution A-T INTRON HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1163-S.SNP.6:15453432 chr06:015453432 0 W/15453432-15453432 FN1163-S Single Base Substitution T-A INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2650-S.SNP.6:15460207 chr06:015460207 0 W/15460207-15460207 FN2650-S SNP C -> G AC=1;AN=200;BQB=0.4172;DP=10681;DP4=5191,3827,23,12;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.222732;MQB=0.79301;MQSB=0;RPB=0.154904;SGB=-82.0227;VDB=0.759507;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.6:15489797 chr06:015489797 0 W/15489797-15489797 FN3789-S SNP G -> A AC=1;AN=190;BQB=0.203157;DP=3344;DP4=1766,1256,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0651914;MQB=0.467602;MQSB=4.50694e-22;RPB=0.0884797;SGB=22.7576;VDB=0.0984458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.6:15489823 chr06:015489823 0 W/15489823-15489823 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.675905;DP=3060;DP4=1555,1234,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.022549;MQB=0.00398713;MQSB=0.0015074;RPB=0.685885;SGB=21.1058;VDB=0.33436;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.6:15499105 chr06:015499105 0 W/15499105-15499105 FN983-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g27370 expressed protein SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2564-S.SNP.6:15500072 chr06:015500072 0 W/15500072-15500072 FN2564-S SNP C -> T AC=1;AN=198;BQB=0.929807;DP=4284;DP4=2374,1722,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.02969e-08;MQSB=0.823412;RPB=0.996698;SGB=21.559;VDB=0.826571;EFF=INTRON(MODIFIER||||461|LOC_Os06g27370|protein_coding|CODING|LOC_Os06g27370.1|1|1) FN2224-S.SNP.6:15503733 chr06:015503733 0 W/15503733-15503733 FN2224-S SNP T -> C AC=1;AN=190;BQB=0.589658;DP=4926;DP4=2290,2261,19,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.54168e-16;MQSB=0.566082;RPB=0.784974;SGB=167.496;VDB=0.425463;EFF=INTRON(MODIFIER||||103|LOC_Os06g27380|protein_coding|CODING|LOC_Os06g27380.1|2|1) FN2292.SNP.6:15505899 chr06:015505899 0 W/15505899-15505899 FN2292 SNP A -> T AC=1;AN=192;BQB=0.699896;DP=4532;DP4=2014,1890,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000882613;MQB=3.77095e-09;MQSB=0.00088273;RPB=0.163776;SGB=18.3052;VDB=0.103568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.6:15509953 chr06:015509953 0 W/15509953-15509953 FN2789-S SNP C -> T AC=1;AN=198;BQB=0.959344;DP=4074;DP4=2271,1617,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000245459;MQB=2.27541e-08;MQSB=0.430894;RPB=0.947144;SGB=24.1541;VDB=0.341481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.6:15509955 chr06:015509955 0 W/15509955-15509955 FN2789-S SNP T -> A AC=1;AN=198;BQB=0.407007;DP=4080;DP4=2237,1655,13,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000245098;MQB=5.08609e-09;MQSB=0.384885;RPB=0.914948;SGB=6.15916;VDB=0.254189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.6:15511029 chr06:015511029 0 W/15511029-15511029 FN2387 SNP C -> T AC=2;AN=192;BQB=0.0684767;DP=5253;DP4=2471,2267,106,39;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00209404;MQB=0;MQSB=0.00907233;RPB=0.00865016;SGB=-2046.45;VDB=8.87965e-12;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.6:15511240 chr06:015511240 0 W/15511240-15511240 FN-237 Single Base Substitution C-T INTERGENIC HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-346.SNP.6:15511240 chr06:015511240 0 W/15511240-15511240 FN-346 Single Base Substitution C-T INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3543-S.SNP.6:15515035 chr06:015515035 0 W/15515035-15515035 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.97785;DP=2996;DP4=1546,1395,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.58552e-06;MQSB=0.799973;RPB=0.255704;SGB=35.3493;VDB=0.0506917;EFF=INTRON(MODIFIER||||218|LOC_Os06g27410|protein_coding|CODING|LOC_Os06g27410.1|1|1) FN2789-S.SNP.6:15517565 chr06:015517565 0 W/15517565-15517565 FN2789-S SNP T -> A AC=1;AN=198;BQB=0.968146;DP=4402;DP4=2217,1941,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.58966e-09;MQSB=0.959172;RPB=0.332865;SGB=72.5245;VDB=0.747005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.6:15517878 chr06:015517878 0 W/15517878-15517878 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.136906;DP=4071;DP4=1751,2053,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00024564;MQB=2.56277e-12;MQSB=0.996607;RPB=0.152826;SGB=61.7198;VDB=0.00843668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.6:15519055 chr06:015519055 0 W/15519055-15519055 FN3751-S SNP G -> A AC=1;AN=190;BQB=0.903546;DP=2487;DP4=1165,1223,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.7632e-08;MQSB=0.0199912;RPB=0.123755;SGB=53.8699;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.6:15519100 chr06:015519100 0 W/15519100-15519100 FN1300-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1577-S.SNP.6:15519406 chr06:015519406 0 W/15519406-15519406 FN1577-S Single Base Substitution C-G INTERGENIC Homo SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN524-S.SNP.6:15522066 chr06:015522066 0 W/15522066-15522066 FN524-S Single Base Substitution G-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1677-S.SNP.6:15524044 chr06:015524044 0 W/15524044-15524044 FN1677-S SNP G -> A AC=2;AN=188;BQB=0.409391;DP=3648;DP4=1884,1720,14,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.76276e-14;MQSB=0.987449;RPB=0.829112;SGB=30.2309;VDB=0.911043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.6:15525853 chr06:015525853 0 W/15525853-15525853 FN3457-S SNP C -> T AC=2;AN=184;BQB=0.985653;DP=2682;DP4=1299,1307,13,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.10328e-15;MQSB=0.962118;RPB=0.995782;SGB=112.047;VDB=0.404232;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.6:15531156 chr06:015531156 0 W/15531156-15531156 FN706-S Single Base Substitution G-A INTRON HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-406.SNP.6:15533106 chr06:015533106 0 W/15533106-15533106 FN-406 Single Base Substitution A-G INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN_814-7-1.SNP.6:15534405 chr06:015534405 0 W/15534405-15534405 FN_814-7-1 Single Base Substitution G-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1030-S.SNP.6:15537405 chr06:015537405 0 W/15537405-15537405 FN1030-S Single Base Substitution G-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN3701-S.SNP.6:15538940 chr06:015538940 0 W/15538940-15538940 FN3701-S SNP G -> A AC=2;AN=190;BQB=0.979227;DP=2874;DP4=1461,1239,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.99291e-14;MQSB=0.85488;RPB=0.454707;SGB=103.742;VDB=0.27062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.6:15539760 chr06:015539760 0 W/15539760-15539760 FN1040-S Single Base Substitution A-G INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2163-S.SNP.6:15544636 chr06:015544636 0 W/15544636-15544636 FN2163-S SNP C -> T AC=2;AN=168;BQB=0.593394;DP=2808;DP4=1272,1489,12,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.45556e-14;MQSB=0.999923;RPB=0.499295;SGB=-83.76;VDB=0.610934;EFF=INTRON(MODIFIER||||374|LOC_Os06g27450|protein_coding|CODING|LOC_Os06g27450.1|2|1) FN_789-3-1.SNP.6:15546946 chr06:015546946 0 W/15546946-15546946 FN_789-3-1 Single Base Substitution C-T INTRON HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN4302-S.SNP.6:15551129 chr06:015551129 0 W/15551129-15551129 FN4302-S SNP A -> T AC=2;AN=170;BQB=0.768411;DP=2469;DP4=1257,1144,14,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00567031;MQB=3.94376e-08;MQSB=0.66076;RPB=0.99855;SGB=92.2986;VDB=0.910782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.6:15553460 chr06:015553460 0 W/15553460-15553460 FN1563-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os06g27470 retrotransposon, putative, centromere-specific SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3332-S.SNP.6:15553460 chr06:015553460 0 W/15553460-15553460 FN3332-S SNP G -> A AC=2;AN=182;BQB=0.991414;DP=3778;DP4=1878,1748,18,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.97054e-19;MQSB=0.993854;RPB=0.850337;SGB=161.787;VDB=0.59617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S68F|164|LOC_Os06g27470|protein_coding|CODING|LOC_Os06g27470.1|1|1) FN3627-S.SNP.6:15553460 chr06:015553460 0 W/15553460-15553460 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.898681;DP=3214;DP4=1713,1357,20,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.85527e-15;MQSB=0.899956;RPB=0.461084;SGB=131.065;VDB=0.547156;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S68F|164|LOC_Os06g27470|protein_coding|CODING|LOC_Os06g27470.1|1|1) FN420-S.SNP.6:15553460 chr06:015553460 0 W/15553460-15553460 FN420-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g27470 retrotransposon, putative, centromere-specific SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN3412-S.SNP.6:15557253 chr06:015557253 0 W/15557253-15557253 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.984088;DP=2833;DP4=1469,1292,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.69997e-07;MQSB=0.97119;RPB=0.970213;SGB=44.2207;VDB=0.947221;EFF=INTRON(MODIFIER||||1652|LOC_Os06g27480|protein_coding|CODING|LOC_Os06g27480.1|1|1) FN449-S.SNP.6:15557336 chr06:015557336 0 W/15557336-15557336 FN449-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN-163.SNP.6:15559218 chr06:015559218 0 W/15559218-15559218 FN-163 Single Base Substitution G-A INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2112-S.SNP.6:15566100 chr06:015566100 0 W/15566100-15566100 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.0162755;DP=3212;DP4=1537,1594,15,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.9482e-12;MQSB=0.691274;RPB=0.903453;SGB=-64.9298;VDB=0.75252;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S105|710|LOC_Os06g27490|protein_coding|CODING|LOC_Os06g27490.1|2|1) FN482-S.SNP.6:15567300 chr06:015567300 0 W/15567300-15567300 FN482-S Single Base Substitution T-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN2725-S.SNP.6:15568844 chr06:015568844 0 W/15568844-15568844 FN2725-S SNP A -> T AC=1;AN=200;BQB=0.826858;DP=4133;DP4=2108,1764,10,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=8.89982e-14;MQSB=0.851876;RPB=0.997025;SGB=91.1059;VDB=0.715164;EFF=INTRON(MODIFIER||||305|LOC_Os06g27500|protein_coding|CODING|LOC_Os06g27500.1|1|1) FN2725-S.SNP.6:15568845 chr06:015568845 0 W/15568845-15568845 FN2725-S SNP T -> A AC=1;AN=200;BQB=0.882909;DP=4148;DP4=2117,1768,11,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.77678e-14;MQSB=0.889114;RPB=0.999963;SGB=69.1109;VDB=0.71803;EFF=INTRON(MODIFIER||||305|LOC_Os06g27500|protein_coding|CODING|LOC_Os06g27500.1|1|1) FN404-S.SNP.6:15572578 chr06:015572578 0 W/15572578-15572578 FN404-S Single Base Substitution A-G INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1473-S.SNP.6:15572995 chr06:015572995 0 W/15572995-15572995 FN1473-S Single Base Substitution C-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN1086-S.SNP.6:15574010 chr06:015574010 0 W/15574010-15574010 FN1086-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g27510 hypothetical protein SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-60.SNP.6:15585617 chr06:015585617 0 W/15585617-15585617 FN-60 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN3396-S.SNP.6:15586739 chr06:015586739 0 W/15586739-15586739 FN3396-S SNP A -> G AC=1;AN=184;BQB=0.941441;DP=3662;DP4=1893,1601,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00873839;MQB=0.000219417;MQSB=8.15462e-23;RPB=0.991514;SGB=25.7969;VDB=0.296488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.6:15591776 chr06:015591776 0 W/15591776-15591776 FN3877-S SNP C -> T AC=1;AN=158;BQB=0.670468;DP=2440;DP4=1222,1119,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.26263e-09;MQSB=0.896194;RPB=0.67678;SGB=57.6596;VDB=0.754145;EFF=INTRON(MODIFIER||||1069|LOC_Os06g27540|protein_coding|CODING|LOC_Os06g27540.1|3|1) FN3714-S.SNP.6:15595452 chr06:015595452 0 W/15595452-15595452 FN3714-S SNP T -> A AC=2;AN=190;BQB=0.969526;DP=2702;DP4=1042,1516,16,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.67591e-21;MQSB=0.991378;RPB=0.42088;SGB=184.765;VDB=0.826342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.6:15597136 chr06:015597136 0 W/15597136-15597136 FN3697-S SNP C -> A AC=1;AN=190;BQB=0.572677;DP=2928;DP4=1568,1265,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00034153;MQB=7.9723e-05;MQSB=0.993842;RPB=0.993477;SGB=39.6545;VDB=0.622511;EFF=INTRON(MODIFIER||||91|LOC_Os06g27550|protein_coding|CODING|LOC_Os06g27550.1|1|1) FN4312-S.SNP.6:15597433 chr06:015597433 0 W/15597433-15597433 FN4312-S SNP G -> T AC=1;AN=170;BQB=0.999925;DP=2314;DP4=993,1242,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.24471e-07;MQSB=0.99487;RPB=0.960559;SGB=52.3148;VDB=0.178826;EFF=INTRON(MODIFIER||||91|LOC_Os06g27550|protein_coding|CODING|LOC_Os06g27550.1|1|1) FN2558-S.SNP.6:15597848 chr06:015597848 0 W/15597848-15597848 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.778816;DP=3730;DP4=1818,1743,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06472e-06;MQSB=0.996978;RPB=0.995522;SGB=49.5489;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.6:15598901 chr06:015598901 0 W/15598901-15598901 FN4047-S SNP G -> A AC=2;AN=168;BQB=0.739136;DP=1626;DP4=651,829,8,7;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=0.000126306;MQSB=0.000303222;RPB=0.995889;SGB=61.0344;VDB=0.590678;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.6:15600760 chr06:015600760 0 W/15600760-15600760 FN-213 Single Base Substitution G-A INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN1700-S.SNP.6:15601023 chr06:015601023 0 W/15601023-15601023 FN1700-S SNP G -> A AC=1;AN=188;BQB=0.555201;DP=3455;DP4=1664,1765,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.12362e-07;MQSB=0.970424;RPB=0.470202;SGB=31.1628;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.6:15602128 chr06:015602128 0 W/15602128-15602128 FN808-S Single Base Substitution C-T STOP_GAINED HET LOC_Os06g27560 glycosyltransferase protein, putative, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3792-S.SNP.6:15610684 chr06:015610684 0 W/15610684-15610684 FN3792-S SNP C -> G AC=1;AN=190;BQB=0.966586;DP=3051;DP4=1557,1394,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.41628e-10;MQSB=0.996016;RPB=0.520514;SGB=62.7569;VDB=0.0909147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q328E|441|LOC_Os06g27580|protein_coding|CODING|LOC_Os06g27580.1|4|1) FN3490-S.SNP.6:15619361 chr06:015619361 0 W/15619361-15619361 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.969227;DP=3510;DP4=1786,1598,20,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.36835e-20;MQSB=0.982409;RPB=0.971692;SGB=120.271;VDB=0.0682582;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R213*|441|LOC_Os06g27600|protein_coding|CODING|LOC_Os06g27600.1|3|1) FN-73.SNP.6:15621721 chr06:015621721 0 W/15621721-15621721 FN-73 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g27610 expressed protein SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2321.SNP.6:15625323 chr06:015625323 0 W/15625323-15625323 FN2321 SNP C -> T AC=2;AN=192;BQB=0.310131;DP=4681;DP4=1900,2458,18,34;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=3.03866e-17;MQSB=0.48608;RPB=0.521281;SGB=175.225;VDB=0.984417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1449-S.SNP.6:15625615 chr06:015625615 0 W/15625615-15625615 FN1449-S Single Base Substitution C-A INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN500-S.SNP.6:15626254 chr06:015626254 0 W/15626254-15626254 FN500-S Single Base Substitution G-T INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2212-S.SNP.6:15636782 chr06:015636782 0 W/15636782-15636782 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.697308;DP=4024;DP4=1818,2009,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79644e-08;MQSB=0.000146868;RPB=0.944319;SGB=71.8647;VDB=0.764012;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.6:15636984 chr06:015636984 0 W/15636984-15636984 FN-124 Single Base Substitution T-A INTERGENIC HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN1114-S.SNP.6:15637748 chr06:015637748 0 W/15637748-15637748 FN1114-S Single Base Substitution A-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN434-S.SNP.6:15637813 chr06:015637813 0 W/15637813-15637813 FN434-S Single Base Substitution G-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN4203-S.SNP.6:15639039 chr06:015639039 0 W/15639039-15639039 FN4203-S SNP T -> C AC=2;AN=170;BQB=0.929829;DP=2506;DP4=962,1352,21,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.2583e-16;MQSB=0.961658;RPB=0.268899;SGB=61.409;VDB=0.805493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.6:15642248 chr06:015642248 0 W/15642248-15642248 FN2351 SNP A -> G AC=1;AN=192;BQB=0.735629;DP=4812;DP4=2269,1981,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207814;MQB=2.76831e-11;MQSB=0.965178;RPB=0.607002;SGB=-8.56084;VDB=0.943198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.6:15642525 chr06:015642525 0 W/15642525-15642525 FN1443-S Single Base Substitution T-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN677-S.SNP.6:15642653 chr06:015642653 0 W/15642653-15642653 FN677-S Single Base Substitution C-G INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN1325-S.SNP.6:15642813 chr06:015642813 0 W/15642813-15642813 FN1325-S Single Base Substitution C-T INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN-83.SNP.6:15644509 chr06:015644509 0 W/15644509-15644509 FN-83 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3570-S.SNP.6:15645443 chr06:015645443 0 W/15645443-15645443 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.765917;DP=2822;DP4=1300,1419,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.06935e-08;MQSB=0.962646;RPB=0.223707;SGB=53.8699;VDB=0.693103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3581-S.SNP.6:15658386 chr06:015658386 0 W/15658386-15658386 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.408162;DP=2863;DP4=1464,1272,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.12477e-07;MQSB=0.884016;RPB=0.423895;SGB=46.7622;VDB=0.156207;EFF=UTR_3_PRIME(MODIFIER||2051||178|LOC_Os06g27650|protein_coding|CODING|LOC_Os06g27650.1|6|1) FN-227.SNP.6:15669323 chr06:015669323 0 W/15669323-15669323 FN-227 Single Base Substitution G-A INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2080-S.SNP.6:15671998 chr06:015671998 0 W/15671998-15671998 FN2080-S SNP T -> C AC=1;AN=168;BQB=0.0940519;DP=4056;DP4=2006,2018,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000246548;MQB=5.45956e-08;MQSB=0.333431;RPB=0.996318;SGB=-61.7914;VDB=0.86245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.6:15673933 chr06:015673933 0 W/15673933-15673933 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.896503;DP=5347;DP4=2720,2314,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60244e-16;MQSB=0.977454;RPB=0.999922;SGB=87.1368;VDB=0.0274922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.6:15681782 chr06:015681782 0 W/15681782-15681782 FN3692-S SNP A -> C AC=1;AN=190;BQB=0.974769;DP=2928;DP4=1407,1350,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.81162e-09;MQSB=0.800868;RPB=0.736494;SGB=76.4186;VDB=0.512848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M356L|412|LOC_Os06g27690|protein_coding|CODING|LOC_Os06g27690.1|4|1) FN2353.SNP.6:15685287 chr06:015685287 0 W/15685287-15685287 FN2353 SNP C -> T AC=1;AN=192;BQB=0.995281;DP=4879;DP4=2529,2098,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.39947e-10;MQSB=0.964033;RPB=0.308292;SGB=81.1609;VDB=0.186135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R472Q|716|LOC_Os06g27700|protein_coding|CODING|LOC_Os06g27700.1|5|1) FN2785-S.SNP.6:15688165 chr06:015688165 0 W/15688165-15688165 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.961115;DP=4040;DP4=2019,1813,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.93044e-09;MQSB=0.999753;RPB=0.0319495;SGB=21.559;VDB=0.0324455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.6:15696573 chr06:015696573 0 W/15696573-15696573 FN3964-S SNP A -> G AC=1;AN=168;BQB=0.955553;DP=2509;DP4=1070,1293,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35328e-11;MQSB=0.924677;RPB=0.963157;SGB=62.1945;VDB=0.498987;EFF=INTRON(MODIFIER||||637|LOC_Os06g27720|protein_coding|CODING|LOC_Os06g27720.1|6|1) FN3765-S.SNP.6:15697597 chr06:015697597 0 W/15697597-15697597 FN3765-S SNP C -> G AC=2;AN=190;BQB=0.782263;DP=3260;DP4=1000,2036,8,25;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.00490798;MQB=0.00375869;MQSB=0;RPB=0.948185;SGB=144.727;VDB=0.0199611;EFF=INTRON(MODIFIER||||637|LOC_Os06g27720|protein_coding|CODING|LOC_Os06g27720.1|6|1) FN1205-S.SNP.6:15700473 chr06:015700473 0 W/15700473-15700473 FN1205-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g27720 retrotransposon protein, putative, unclassified, expressed SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3893-S.SNP.6:15711510 chr06:015711510 0 W/15711510-15711510 FN3893-S SNP T -> G AC=1;AN=158;BQB=0.697598;DP=2470;DP4=1042,1251,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00728745;MQB=0.547911;MQSB=0.0785763;RPB=0.454042;SGB=42.6978;VDB=0.182174;EFF=INTRON(MODIFIER||||681|LOC_Os06g27740|protein_coding|CODING|LOC_Os06g27740.1|2|1) FN2684-S.SNP.6:15717094 chr06:015717094 0 W/15717094-15717094 FN2684-S SNP C -> T AC=2;AN=200;BQB=0.997193;DP=4540;DP4=2044,2258,18,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.78822e-17;MQSB=0.702865;RPB=0.812425;SGB=71.1676;VDB=0.180949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.6:15721762 chr06:015721762 0 W/15721762-15721762 FN2350 SNP A -> G AC=1;AN=192;BQB=0.847037;DP=5287;DP4=2767,2187,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49031e-10;MQSB=0.954624;RPB=0.330409;SGB=-39.2487;VDB=0.709718;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.6:15727156 chr06:015727156 0 W/15727156-15727156 FN566-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g27770 isoflavone reductase homolog IRL, putative, expressed SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN566-S.SNP.6:15727157 chr06:015727157 0 W/15727157-15727157 FN566-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1270-S.SNP.6:15728444 chr06:015728444 0 W/15728444-15728444 FN1270-S Single Base Substitution C-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2243-S.SNP.6:15728610 chr06:015728610 0 W/15728610-15728610 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.0739968;DP=5062;DP4=2399,2342,8,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.00131e-13;MQSB=0.909539;RPB=0.996108;SGB=-39.4473;VDB=0.269991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2253-S.SNP.6:15730198 chr06:015730198 0 W/15730198-15730198 FN2253-S SNP C -> T AC=1;AN=190;BQB=0.926188;DP=3733;DP4=1461,2006,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000267881;MQB=0.000149557;MQSB=0.993057;RPB=0.0829735;SGB=21.8853;VDB=0.507605;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.6:15730370 chr06:015730370 0 W/15730370-15730370 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.986776;DP=2935;DP4=1435,1420,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.68422e-08;MQSB=0.82005;RPB=0.798009;SGB=39.1386;VDB=0.454779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1576-S.SNP.6:15734909 chr06:015734909 0 W/15734909-15734909 FN1576-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g27790 pentatricopeptide, putative, expressed SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2279-S.SNP.6:15736816 chr06:015736816 0 W/15736816-15736816 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.126513;DP=4736;DP4=2300,2182,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19795e-08;MQSB=0.999747;RPB=0.940299;SGB=64.5316;VDB=0.504513;EFF=INTRON(MODIFIER||||382|LOC_Os06g27790|protein_coding|CODING|LOC_Os06g27790.1|2|1) FN2560-S.SNP.6:15739662 chr06:015739662 0 W/15739662-15739662 FN2560-S SNP T -> G AC=1;AN=198;BQB=0.665731;DP=4303;DP4=2244,1887,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.35823e-07;MQSB=0.979649;RPB=0.927747;SGB=29.3637;VDB=0.0368021;EFF=INTRON(MODIFIER||||743|LOC_Os06g27800|protein_coding|CODING|LOC_Os06g27800.1|1|1),INTRON(MODIFIER||||744|LOC_Os06g27800|protein_coding|CODING|LOC_Os06g27800.2|1|1) FN2083-S.SNP.6:15741785 chr06:015741785 0 W/15741785-15741785 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.963023;DP=4178;DP4=2141,1986,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.14425e-17;MQSB=0.935863;RPB=0.004172;SGB=-44.6276;VDB=0.0832784;EFF=INTRON(MODIFIER||||743|LOC_Os06g27800|protein_coding|CODING|LOC_Os06g27800.1|3|1),INTRON(MODIFIER||||744|LOC_Os06g27800|protein_coding|CODING|LOC_Os06g27800.2|3|1) FN1048-S.SNP.6:15745350 chr06:015745350 0 W/15745350-15745350 FN1048-S Single Base Substitution A-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN817-S.SNP.6:15747639 chr06:015747639 0 W/15747639-15747639 FN817-S Single Base Substitution C-A INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN817-S.SNP.6:15747640 chr06:015747640 0 W/15747640-15747640 FN817-S Single Base Substitution T-A INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN2691-S.SNP.6:15752740 chr06:015752740 0 W/15752740-15752740 FN2691-S SNP G -> A AC=2;AN=200;BQB=0.998324;DP=4888;DP4=2198,2390,19,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.48733e-27;MQSB=0.969826;RPB=0.8728;SGB=144.819;VDB=0.655559;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.6:15753272 chr06:015753272 0 W/15753272-15753272 FN3935-S SNP G -> A AC=1;AN=158;BQB=0.956754;DP=2542;DP4=1159,1281,7,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.04375e-11;MQSB=0.999325;RPB=0.512044;SGB=38.0354;VDB=0.198228;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y25|159|LOC_Os06g27810|protein_coding|CODING|LOC_Os06g27810.1|2|1) FN2790-S.SNP.6:15753470 chr06:015753470 0 W/15753470-15753470 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.367347;DP=4202;DP4=1889,2095,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05908e-06;MQSB=0.9992;RPB=0.693079;SGB=32.9588;VDB=0.955982;EFF=INTRON(MODIFIER||||159|LOC_Os06g27810|protein_coding|CODING|LOC_Os06g27810.1|1|1) FN1554-37-38.SNP.6:15754665 chr06:015754665 0 W/15754665-15754665 FN1554-37-38 SNP G -> A AC=1;AN=190;BQB=0.889935;DP=5112;DP4=2427,2324,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58349e-09;MQSB=0.884196;RPB=0.942574;SGB=7.21887;VDB=0.841382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.6:15775256 chr06:015775256 0 W/15775256-15775256 FN2426 SNP A -> G AC=1;AN=200;BQB=0.952651;DP=4300;DP4=2087,1940,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27182e-12;MQSB=0.971934;RPB=0.799806;SGB=86.5007;VDB=0.835315;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F141|1310|LOC_Os06g27840|protein_coding|CODING|LOC_Os06g27840.1|3|1) FN2630-S.SNP.6:15776194 chr06:015776194 0 W/15776194-15776194 FN2630-S SNP C -> A AC=1;AN=200;BQB=0.977676;DP=4678;DP4=2241,2198,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07086e-14;MQSB=0.966273;RPB=0.734536;SGB=69.1109;VDB=0.331554;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1310|LOC_Os06g27840|protein_coding|CODING|LOC_Os06g27840.1|2|1),INTRON(MODIFIER||||1310|LOC_Os06g27840|protein_coding|CODING|LOC_Os06g27840.1|1|1);LOF=(LOC_Os06g27840|LOC_Os06g27840|1|1.00) FN-80.SNP.6:15776594 chr06:015776594 0 W/15776594-15776594 FN-80 Single Base Substitution T-C INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN2105-S.SNP.6:15793135 chr06:015793135 0 W/15793135-15793135 FN2105-S SNP C -> A AC=1;AN=168;BQB=2.03561e-06;DP=3925;DP4=1965,1857,32,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.45757e-07;MQSB=0.989768;RPB=0.594498;SGB=-627.842;VDB=0.329649;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.6:15793288 chr06:015793288 0 W/15793288-15793288 FN1358-S Single Base Substitution C-T INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1375-S.SNP.6:15797899 chr06:015797899 0 W/15797899-15797899 FN1375-S Single Base Substitution G-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3375-S.SNP.6:15801515 chr06:015801515 0 W/15801515-15801515 FN3375-S SNP G -> T AC=1;AN=184;BQB=0.999979;DP=2823;DP4=1477,1211,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85462e-08;MQSB=0.937401;RPB=0.567588;SGB=42.7914;VDB=0.214596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D1046Y|1859|LOC_Os06g27880|protein_coding|CODING|LOC_Os06g27880.1|1|1) FN-327.SNP.6:15804916 chr06:015804916 0 W/15804916-15804916 FN-327 Single Base Substitution T-C INTRON HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN-327.SNP.6:15804918 chr06:015804918 0 W/15804918-15804918 FN-327 Single Base Substitution A-T INTRON HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN2124-S.SNP.6:15807072 chr06:015807072 0 W/15807072-15807072 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.0238627;DP=3333;DP4=1424,1870,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00720072;MQB=0.000121923;MQSB=0.845608;RPB=0.854211;SGB=-80.0779;VDB=0.625519;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.6:15810741 chr06:015810741 0 W/15810741-15810741 FN-44 Single Base Substitution C-A INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN2606-S.SNP.6:15823100 chr06:015823100 0 W/15823100-15823100 FN2606-S SNP A -> T AC=1;AN=198;BQB=0.155994;DP=4262;DP4=1945,2073,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.5304e-05;MQSB=0.608185;RPB=0.893246;SGB=8.58354;VDB=0.443437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.6:15823295 chr06:015823295 0 W/15823295-15823295 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.752233;DP=2242;DP4=626,1396,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18387e-11;MQSB=0.000462874;RPB=0.982328;SGB=85.3253;VDB=0.218338;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.6:15824964 chr06:015824964 0 W/15824964-15824964 FN2494 SNP G -> A AC=2;AN=200;BQB=0.0855584;DP=4736;DP4=2043,2419,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31702e-21;MQSB=0.523089;RPB=0.711961;SGB=94.6142;VDB=0.0142078;EFF=INTERGENIC(MODIFIER||||||||||1) FN3974-S.SNP.6:15825434 chr06:015825434 0 W/15825434-15825434 FN3974-S SNP G -> A AC=2;AN=168;BQB=0.624566;DP=2435;DP4=1233,970,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.07361e-12;MQSB=0.280823;RPB=0.9026;SGB=18.4989;VDB=0.598955;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.6:15835133 chr06:015835133 0 W/15835133-15835133 FN1565-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g27900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2751-S.SNP.6:15836009 chr06:015836009 0 W/15836009-15836009 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.885743;DP=4715;DP4=2472,2016,6,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0101803;MQB=0.000570054;MQSB=0.0424017;RPB=0.555972;SGB=49.6594;VDB=0.376268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P747L|1017|LOC_Os06g27900|protein_coding|CODING|LOC_Os06g27900.1|3|1) FN3710-S.SNP.6:15839476 chr06:015839476 0 W/15839476-15839476 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.781777;DP=3156;DP4=1562,1477,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.12381e-07;MQSB=0.919473;RPB=0.783666;SGB=32.5467;VDB=0.598947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.6:15843345 chr06:015843345 0 W/15843345-15843345 FN3375-S SNP G -> T AC=2;AN=184;BQB=0.102917;DP=2309;DP4=1139,998,12,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.64078e-07;MQSB=0.618345;RPB=0.855126;SGB=43.4494;VDB=0.293258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.6:15844887 chr06:015844887 0 W/15844887-15844887 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.895852;DP=3038;DP4=1390,1514,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.2191e-05;MQSB=1.0826e-06;RPB=0.597394;SGB=35.7479;VDB=0.151085;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.6:15848881 chr06:015848881 0 W/15848881-15848881 FN-269 Single Base Substitution T-A INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. W475-4-2.SNP.6:15858673 chr06:015858673 0 W/15858673-15858673 W475-4-2 Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN-210.SNP.6:15859735 chr06:015859735 0 W/15859735-15859735 FN-210 Single Base Substitution A-G INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3714-S.SNP.6:15860641 chr06:015860641 0 W/15860641-15860641 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.613854;DP=2757;DP4=1315,1328,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.20326e-13;MQSB=0.952426;RPB=0.839052;SGB=82.301;VDB=0.494632;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.6:15861195 chr06:015861195 0 W/15861195-15861195 FN491-S Single Base Substitution C-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN763-S.SNP.6:15875306 chr06:015875306 0 W/15875306-15875306 FN763-S Single Base Substitution G-T INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3298-S.SNP.6:15879775 chr06:015879775 0 W/15879775-15879775 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.989122;DP=2943;DP4=1240,1569,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.59586e-06;MQSB=0.743699;RPB=0.582056;SGB=39.699;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.6:15880103 chr06:015880103 0 W/15880103-15880103 FN1230-S Single Base Substitution G-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN3341-S.SNP.6:15883059 chr06:015883059 0 W/15883059-15883059 FN3341-S SNP G -> A AC=1;AN=184;BQB=0.904349;DP=3597;DP4=1679,1811,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13997e-08;MQSB=0.00290659;RPB=0.99988;SGB=57.786;VDB=0.507997;EFF=INTRON(MODIFIER||||496|LOC_Os06g27990|protein_coding|CODING|LOC_Os06g27990.1|1|1) FN777-S.SNP.6:15883557 chr06:015883557 0 W/15883557-15883557 FN777-S Single Base Substitution G-T INTRON HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2483.SNP.6:15888829 chr06:015888829 0 W/15888829-15888829 FN2483 SNP G -> C AC=1;AN=200;BQB=0.997141;DP=4618;DP4=2285,2113,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.2782e-09;MQSB=0.156092;RPB=0.658374;SGB=54.6902;VDB=0.694359;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.6:15891035 chr06:015891035 0 W/15891035-15891035 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.368481;DP=3247;DP4=1352,1788,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.59596e-05;MQSB=0.935895;RPB=0.975277;SGB=25.0952;VDB=0.996208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.6:15897461 chr06:015897461 0 W/15897461-15897461 FN3460-S SNP G -> T AC=2;AN=184;BQB=0.965363;DP=2472;DP4=1141,1230,13,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.42086e-11;MQSB=0.977796;RPB=0.842094;SGB=33.3622;VDB=0.994066;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.6:15903671 chr06:015903671 0 W/15903671-15903671 FN3820-S SNP G -> A AC=1;AN=190;BQB=0.736;DP=2817;DP4=1229,1513,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0326589;MQB=0.966086;MQSB=0.028807;RPB=0.726422;SGB=49.0954;VDB=0.885039;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A43T|568|LOC_Os06g28020|protein_coding|CODING|LOC_Os06g28020.1|1|1) FN3830-S.SNP.6:15903697 chr06:015903697 0 W/15903697-15903697 FN3830-S SNP T -> C AC=2;AN=190;BQB=0.995846;DP=2792;DP4=1178,1512,16,21;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.0648281;MQB=0.999054;MQSB=0.000118878;RPB=0.545242;SGB=162.942;VDB=0.151949;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y51|568|LOC_Os06g28020|protein_coding|CODING|LOC_Os06g28020.1|1|1) FN2653-S.SNP.6:15905220 chr06:015905220 0 W/15905220-15905220 FN2653-S SNP A -> T AC=1;AN=200;BQB=0.526158;DP=4463;DP4=2185,2046,10,10;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.22048;MQB=0.999472;MQSB=0;RPB=0.946977;SGB=61.9006;VDB=0.772379;EFF=INTRON(MODIFIER||||568|LOC_Os06g28020|protein_coding|CODING|LOC_Os06g28020.1|1|1) FN3538-S.SNP.6:15905416 chr06:015905416 0 W/15905416-15905416 FN3538-S SNP G -> T AC=1;AN=188;BQB=0.942471;DP=4421;DP4=1544,2759,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.247682;MQB=0.317771;MQSB=0;RPB=0.1989;SGB=32.441;VDB=0.870724;EFF=INTRON(MODIFIER||||568|LOC_Os06g28020|protein_coding|CODING|LOC_Os06g28020.1|1|1) FN3718-S.SNP.6:15910909 chr06:015910909 0 W/15910909-15910909 FN3718-S SNP T -> A AC=2;AN=190;BQB=0.92877;DP=2645;DP4=1296,1205,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.67013e-12;MQSB=0.999435;RPB=0.670036;SGB=103.742;VDB=0.642395;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H18Q|119|LOC_Os06g28040|protein_coding|CODING|LOC_Os06g28040.1|1|1) FN2218-S.SNP.6:15912545 chr06:015912545 0 W/15912545-15912545 FN2218-S SNP C -> T AC=2;AN=190;BQB=0.998845;DP=5026;DP4=2193,2465,29,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198965;MQB=2.99201e-30;MQSB=0.964694;RPB=0.0013999;SGB=9.48697;VDB=0.0892597;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.6:15913369 chr06:015913369 0 W/15913369-15913369 FN-192 Single Base Substitution A-G INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2498.SNP.6:15914095 chr06:015914095 0 W/15914095-15914095 FN2498 SNP G -> T AC=1;AN=200;BQB=0.989055;DP=4529;DP4=2269,1986,14,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33623e-14;MQSB=0.000480408;RPB=0.592129;SGB=-4.03268;VDB=0.922131;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.6:15916176 chr06:015916176 0 W/15916176-15916176 W464-2-1 Single Base Substitution G-A INTRON HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2323.SNP.6:15917015 chr06:015917015 0 W/15917015-15917015 FN2323 SNP C -> T AC=1;AN=192;BQB=0.086228;DP=4655;DP4=2225,2084,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000214823;MQB=2.29582e-13;MQSB=0.696514;RPB=0.994958;SGB=-6.8678;VDB=0.975769;EFF=UTR_3_PRIME(MODIFIER||331||158|LOC_Os06g28050|protein_coding|CODING|LOC_Os06g28050.4|4|1),INTRON(MODIFIER||||200|LOC_Os06g28050|protein_coding|CODING|LOC_Os06g28050.1|4|1),INTRON(MODIFIER||||200|LOC_Os06g28050|protein_coding|CODING|LOC_Os06g28050.3|3|1) FN1399-S.SNP.6:15933359 chr06:015933359 0 W/15933359-15933359 FN1399-S Single Base Substitution T-C INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2380.SNP.6:15935575 chr06:015935575 0 W/15935575-15935575 FN2380 SNP A -> T AC=1;AN=192;BQB=0.572781;DP=4878;DP4=2432,2211,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.56991e-10;MQSB=0.943845;RPB=0.0399407;SGB=54.0374;VDB=0.0476679;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.6:15936853 chr06:015936853 0 W/15936853-15936853 FN625-S Single Base Substitution T-A INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2715-S.SNP.6:15955360 chr06:015955360 0 W/15955360-15955360 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.591674;DP=4909;DP4=2151,2398,5,4;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0189448;MQB=0.201807;MQSB=0.00093181;RPB=0.957488;SGB=22.2439;VDB=0.464746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R513C|1054|LOC_Os06g28090|protein_coding|CODING|LOC_Os06g28090.1|2|1) FN1023-S.SNP.6:15955793 chr06:015955793 0 W/15955793-15955793 FN1023-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g28090 retrotransposon protein, putative, unclassified, expressed SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1119-S.SNP.6:15956799 chr06:015956799 0 W/15956799-15956799 FN1119-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3630-S.SNP.6:15976767 chr06:015976767 0 W/15976767-15976767 FN3630-S SNP G -> T AC=1;AN=190;BQB=0.966891;DP=2756;DP4=1459,1195,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00798258;MQB=0.0678279;MQSB=0.0209667;RPB=0.849526;SGB=-3.65821;VDB=0.456924;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.6:15982574 chr06:015982574 0 W/15982574-15982574 FN3853-S SNP G -> A AC=1;AN=156;BQB=0.913798;DP=2366;DP4=1200,1045,6,6;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.82987e-05;MQSB=0.94798;RPB=0.504563;SGB=47.0672;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.6:15984313 chr06:015984313 0 W/15984313-15984313 FN768-S Single Base Substitution T-A INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN1700-S.SNP.6:15987257 chr06:015987257 0 W/15987257-15987257 FN1700-S SNP G -> A AC=1;AN=188;BQB=0.0387188;DP=6425;DP4=3131,3239,21,18;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0382879;MQB=0.779238;MQSB=0.00323789;RPB=0.143781;SGB=-89.5799;VDB=0.744004;EFF=INTERGENIC(MODIFIER||||||||||1) FN-245.SNP.6:16000489 chr06:016000489 0 W/16000489-16000489 FN-245 Single Base Substitution C-T INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1546-S.SNP.6:16000489 chr06:016000489 0 W/16000489-16000489 FN1546-S Single Base Substitution C-T INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN3372-S.SNP.6:16000489 chr06:016000489 0 W/16000489-16000489 FN3372-S SNP C -> T AC=2;AN=184;BQB=0.779438;DP=2781;DP4=1656,968,11,9;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.34464e-05;MQSB=0.658003;RPB=0.989359;SGB=60.4004;VDB=0.919254;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.6:16000489 chr06:016000489 0 W/16000489-16000489 FN831-S Single Base Substitution C-T INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN4305-S.SNP.6:16000505 chr06:016000505 0 W/16000505-16000505 FN4305-S SNP C -> A AC=1;AN=170;BQB=0.972641;DP=2030;DP4=1320,626,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.2422e-08;MQSB=4.42746e-05;RPB=0.354082;SGB=56.7575;VDB=0.359944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.6:16002473 chr06:016002473 0 W/16002473-16002473 FN2711-S SNP C -> T AC=2;AN=200;BQB=0.894307;DP=4528;DP4=2262,1999,21,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20463e-22;MQSB=0.998392;RPB=0.905075;SGB=160.183;VDB=0.609769;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.6:16003297 chr06:016003297 0 W/16003297-16003297 FN2082-S SNP T -> A AC=1;AN=168;BQB=0.0119251;DP=3258;DP4=1504,1714,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.64953e-06;MQSB=0.963644;RPB=0.984078;SGB=4.1907;VDB=0.967713;EFF=INTRON(MODIFIER||||549|LOC_Os06g28170|protein_coding|CODING|LOC_Os06g28170.1|5|1) FN1315-S.SNP.6:16005065 chr06:016005065 0 W/16005065-16005065 FN1315-S Single Base Substitution G-T STOP_GAINED HET LOC_Os06g28170 expressed protein SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN687-S.SNP.6:16005243 chr06:016005243 0 W/16005243-16005243 FN687-S Single Base Substitution T-C INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1749-S.SNP.6:16008067 chr06:016008067 0 W/16008067-16008067 FN1749-S SNP G -> T AC=2;AN=188;BQB=0.922554;DP=4236;DP4=2179,1994,31,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000708215;MQB=3.91372e-25;MQSB=0.923735;RPB=0.165043;SGB=-51.9791;VDB=0.794887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.6:16009539 chr06:016009539 0 W/16009539-16009539 FN2239-S SNP G -> A AC=1;AN=190;BQB=9.11969e-10;DP=3081;DP4=880,1531,24,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00097371;MQB=7.23199e-08;MQSB=0.0427002;RPB=8.41831e-05;SGB=-554.251;VDB=0.742858;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.6:16011590 chr06:016011590 0 W/16011590-16011590 W464-2-1 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2301.SNP.6:16012020 chr06:016012020 0 W/16012020-16012020 FN2301 SNP T -> C AC=1;AN=192;BQB=0.788299;DP=4312;DP4=2003,1963,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.60668e-09;MQSB=0.403288;RPB=0.994913;SGB=46.9087;VDB=0.940417;EFF=INTRON(MODIFIER||||625|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.1|1|1),INTRON(MODIFIER||||598|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.2|1|1),INTRON(MODIFIER||||557|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.3|1|1),INTRON(MODIFIER||||534|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.4|1|1),INTRON(MODIFIER||||495|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.5|1|1) FN4036-S.SNP.6:16017119 chr06:016017119 0 W/16017119-16017119 FN4036-S SNP T -> A AC=1;AN=168;BQB=0.320661;DP=2810;DP4=1228,1429,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.39528e-07;MQSB=0.845107;RPB=0.9778;SGB=51.902;VDB=0.727371;EFF=INTRON(MODIFIER||||625|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.1|1|1),INTRON(MODIFIER||||598|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.2|1|1),INTRON(MODIFIER||||557|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.3|1|1),INTRON(MODIFIER||||534|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.4|1|1),INTRON(MODIFIER||||495|LOC_Os06g28194|protein_coding|CODING|LOC_Os06g28194.5|1|1) FN1409-S.SNP.6:16026663 chr06:016026663 0 W/16026663-16026663 FN1409-S Single Base Substitution C-T INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1373-S.SNP.6:16027038 chr06:016027038 0 W/16027038-16027038 FN1373-S Single Base Substitution G-A INTRON HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2296.SNP.6:16037536 chr06:016037536 0 W/16037536-16037536 FN2296 SNP C -> T AC=1;AN=192;BQB=0.806674;DP=4589;DP4=1923,2366,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00217912;MQB=0.000127597;MQSB=0.984388;RPB=0.101915;SGB=18.3052;VDB=0.437074;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.6:16038474 chr06:016038474 0 W/16038474-16038474 FN1227-S Single Base Substitution C-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN_770-6-1.SNP.6:16041291 chr06:016041291 0 W/16041291-16041291 FN_770-6-1 Single Base Substitution C-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN-122.SNP.6:16052319 chr06:016052319 0 W/16052319-16052319 FN-122 Single Base Substitution C-G INTERGENIC HOMO SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-255.SNP.6:16060524 chr06:016060524 0 W/16060524-16060524 FN-255 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g28260 expressed protein SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN4150-S.SNP.6:16065622 chr06:016065622 0 W/16065622-16065622 FN4150-S SNP A -> T AC=1;AN=170;BQB=0.99887;DP=2527;DP4=1151,1271,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.05114e-11;MQSB=0.993129;RPB=0.99297;SGB=55.5339;VDB=0.822348;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.6:16077139 chr06:016077139 0 W/16077139-16077139 FN1156-XA21 Single Base Substitution T-A STOP_GAINED HET LOC_Os06g28310 retrotransposon protein, putative, unclassified, expressed SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1513-S.SNP.6:16081697 chr06:016081697 0 W/16081697-16081697 FN1513-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g28310 retrotransposon protein, putative, unclassified, expressed SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2441.SNP.6:16087209 chr06:016087209 0 W/16087209-16087209 FN2441 SNP G -> A AC=1;AN=200;BQB=0.489994;DP=4843;DP4=2215,2335,18,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97335e-22;MQSB=0.895978;RPB=0.378634;SGB=160.183;VDB=0.241916;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.6:16089461 chr06:016089461 0 W/16089461-16089461 FN-178 Single Base Substitution A-G INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3827-S.SNP.6:16097646 chr06:016097646 0 W/16097646-16097646 FN3827-S SNP C -> G AC=1;AN=190;BQB=0.991631;DP=4268;DP4=1596,2549,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0775539;MQB=0.867842;MQSB=0.000112555;RPB=0.178475;SGB=50.3161;VDB=0.849493;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A962|1454|LOC_Os06g28330|protein_coding|CODING|LOC_Os06g28330.1|1|1) FN-56.SNP.6:16104569 chr06:016104569 0 W/16104569-16104569 FN-56 Single Base Substitution A-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN564-S.SNP.6:16106005 chr06:016106005 0 W/16106005-16106005 FN564-S Single Base Substitution G-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN1746-S.SNP.6:16110534 chr06:016110534 0 W/16110534-16110534 FN1746-S SNP A -> G AC=1;AN=188;BQB=0.134965;DP=3246;DP4=1615,1577,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12853e-08;MQSB=0.988315;RPB=0.939072;SGB=-38.278;VDB=0.867997;EFF=INTRON(MODIFIER||||933|LOC_Os06g28340|protein_coding|CODING|LOC_Os06g28340.1|11|1) FN4234-S.SNP.6:16121662 chr06:016121662 0 W/16121662-16121662 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.922417;DP=2468;DP4=1052,1322,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.08669e-05;MQSB=0.351359;RPB=0.455429;SGB=34.5445;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.6:16123314 chr06:016123314 0 W/16123314-16123314 FN3807-S SNP T -> A AC=1;AN=190;BQB=0.989816;DP=3177;DP4=1290,1762,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87388e-10;MQSB=0.999957;RPB=0.867768;SGB=53.8699;VDB=0.829467;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.6:16123780 chr06:016123780 0 W/16123780-16123780 FN1478-S Single Base Substitution G-A INTERGENIC Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3997-S.SNP.6:16124596 chr06:016124596 0 W/16124596-16124596 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.806208;DP=2707;DP4=1251,1316,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.11482e-10;MQSB=0.963225;RPB=0.714108;SGB=45.0404;VDB=0.428107;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.6:16125212 chr06:016125212 0 W/16125212-16125212 FN4300-S SNP T -> C AC=1;AN=170;BQB=0.954688;DP=2435;DP4=1225,1131,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.55873e-05;MQSB=0.930824;RPB=0.998307;SGB=38.987;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.6:16128890 chr06:016128890 0 W/16128890-16128890 FN1725-S SNP A -> G AC=1;AN=188;BQB=0.406244;DP=2402;DP4=1222,1150,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0041632;MQB=0.0973803;MQSB=0.00234515;RPB=0.983566;SGB=15.903;VDB=0.173134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H752R|874|LOC_Os06g28350|protein_coding|CODING|LOC_Os06g28350.1|5|1) FN2412.SNP.6:16129979 chr06:016129979 0 W/16129979-16129979 FN2412 SNP C -> A AC=1;AN=200;BQB=0.710823;DP=4192;DP4=2309,1585,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.69229e-08;MQSB=0.0208569;RPB=0.724756;SGB=43.8747;VDB=0.183307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.6:16130851 chr06:016130851 0 W/16130851-16130851 FN3550-S SNP G -> T AC=1;AN=188;BQB=0.805018;DP=2627;DP4=1212,1270,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.61991e-08;MQSB=0.947145;RPB=0.973768;SGB=20.9896;VDB=0.744912;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.6:16134455 chr06:016134455 0 W/16134455-16134455 FN542-S Single Base Substitution T-A INTRON HOMO SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2655-S.SNP.6:16136338 chr06:016136338 0 W/16136338-16136338 FN2655-S SNP T -> A AC=1;AN=200;BQB=0.94942;DP=4758;DP4=2296,2291,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11626e-08;MQSB=0.979517;RPB=0.865946;SGB=72.6852;VDB=0.550688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.6:16137509 chr06:016137509 0 W/16137509-16137509 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.99412;DP=4452;DP4=2275,1889,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.82984e-05;MQSB=0.977129;RPB=0.376078;SGB=18.9639;VDB=0.557653;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.6:16137509 chr06:016137509 0 W/16137509-16137509 FN302-S Single Base Substitution G-A INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-325.SNP.6:16137526 chr06:016137526 0 W/16137526-16137526 FN-325 Single Base Substitution T-G INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN885-S.SNP.6:16146687 chr06:016146687 0 W/16146687-16146687 FN885-S Single Base Substitution C-A INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN885-S.SNP.6:16146688 chr06:016146688 0 W/16146688-16146688 FN885-S Single Base Substitution T-A INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN4160-S.SNP.6:16153900 chr06:016153900 0 W/16153900-16153900 FN4160-S SNP G -> A AC=1;AN=170;BQB=0.519814;DP=2519;DP4=1252,1196,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.6922e-05;MQSB=0.347984;RPB=0.946359;SGB=52.3148;VDB=0.1621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S746N|1349|LOC_Os06g28390|protein_coding|CODING|LOC_Os06g28390.1|4|1) FN1255-S.SNP.6:16155059 chr06:016155059 0 W/16155059-16155059 FN1255-S Single Base Substitution G-T INTRON HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3983-S.SNP.6:16159375 chr06:016159375 0 W/16159375-16159375 FN3983-S SNP G -> A AC=1;AN=168;BQB=0.995964;DP=3158;DP4=1530,1520,11,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.40872e-07;MQSB=0.639276;RPB=0.701479;SGB=38.1788;VDB=0.233501;EFF=INTERGENIC(MODIFIER||||||||||1) FN-7.SNP.6:16160629 chr06:016160629 0 W/16160629-16160629 FN-7 Single Base Substitution C-A INTRON Homo SNo: 7, Mutant_ID: FN-7, Generation: M2, Mutations: 27, Genes: 11, Seed availability: Yes. FN3805-S.SNP.6:16168174 chr06:016168174 0 W/16168174-16168174 FN3805-S SNP G -> A AC=1;AN=190;BQB=0.648458;DP=2563;DP4=1180,1247,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000263399;MQSB=0.0805793;RPB=0.979647;SGB=49.0954;VDB=0.931032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.6:16172062 chr06:016172062 0 W/16172062-16172062 FN3425-S SNP C -> T AC=2;AN=184;BQB=0.904859;DP=3667;DP4=1938,1580,18,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12184e-21;MQSB=0.86523;RPB=0.924146;SGB=116.749;VDB=0.131939;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.6:16172062 chr06:016172062 0 W/16172062-16172062 FN978-S Single Base Substitution C-T INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3425-S.SNP.6:16172063 chr06:016172063 0 W/16172063-16172063 FN3425-S SNP C -> T AC=2;AN=184;BQB=0.713657;DP=3680;DP4=1959,1582,19,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.56005e-23;MQSB=0.826787;RPB=0.952251;SGB=175.352;VDB=0.218828;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.6:16172063 chr06:016172063 0 W/16172063-16172063 FN978-S Single Base Substitution C-T INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-166.SNP.6:16172610 chr06:016172610 0 W/16172610-16172610 FN-166 Single Base Substitution T-G INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2702-S.SNP.6:16174146 chr06:016174146 0 W/16174146-16174146 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.942187;DP=4903;DP4=2101,2518,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.35129e-06;MQSB=0.978907;RPB=0.988503;SGB=35.8441;VDB=0.692532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.6:16178073 chr06:016178073 0 W/16178073-16178073 FN3879-S SNP A -> C AC=2;AN=158;BQB=0.892359;DP=2465;DP4=1216,1130,19,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.18416e-15;MQSB=0.985146;RPB=0.321203;SGB=103.87;VDB=0.142044;EFF=INTRON(MODIFIER||||232|LOC_Os06g28430|protein_coding|CODING|LOC_Os06g28430.1|1|1) FN3507-S.SNP.6:16180561 chr06:016180561 0 W/16180561-16180561 FN3507-S SNP C -> T AC=2;AN=188;BQB=0.81238;DP=2912;DP4=1661,1162,23,10;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=8.56612e-14;MQSB=1.30799e-07;RPB=0.874452;SGB=144.388;VDB=0.0420454;EFF=INTRON(MODIFIER||||737|LOC_Os06g28450|protein_coding|CODING|LOC_Os06g28450.1|1|1) FN2631-S.SNP.6:16184382 chr06:016184382 0 W/16184382-16184382 FN2631-S SNP C -> A AC=1;AN=200;BQB=0.932318;DP=4995;DP4=2577,2184,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002002;MQB=8.13005e-16;MQSB=0.979518;RPB=0.750828;SGB=118.737;VDB=0.403322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.6:16188849 chr06:016188849 0 W/16188849-16188849 FN3377-S SNP G -> A AC=1;AN=184;BQB=0.974;DP=3071;DP4=1862,1096,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.98704e-05;MQSB=0.189391;RPB=0.258646;SGB=35.1773;VDB=0.48031;EFF=INTRON(MODIFIER||||579|LOC_Os06g28460|protein_coding|CODING|LOC_Os06g28460.1|2|1) FN2692-S.SNP.6:16190517 chr06:016190517 0 W/16190517-16190517 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.980511;DP=5202;DP4=2408,2507,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82057e-07;MQSB=0.331291;RPB=0.968925;SGB=-14.9257;VDB=0.895933;EFF=INTRON(MODIFIER||||579|LOC_Os06g28460|protein_coding|CODING|LOC_Os06g28460.1|3|1) FN2442.SNP.6:16192861 chr06:016192861 0 W/16192861-16192861 FN2442 SNP T -> C AC=2;AN=200;BQB=0.296397;DP=4550;DP4=2406,1889,18,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.64613e-25;MQSB=0.873323;RPB=0.141056;SGB=148.425;VDB=0.767723;EFF=INTRON(MODIFIER||||579|LOC_Os06g28460|protein_coding|CODING|LOC_Os06g28460.1|4|1) FN-137.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN-137 Single Base Substitution A-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-76.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN-76 Single Base Substitution A-T INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1196-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN1196-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1493-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN1493-S Single Base Substitution A-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1643-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN1643-S Single Base Substitution A-T INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1658-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN1658-S SNP A -> T AC=1;AN=188;BQB=0.801137;DP=3176;DP4=1703,1426,14,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.00139551;MQSB=0.807722;RPB=0.931098;SGB=11.7114;VDB=0.681863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.720185;DP=3227;DP4=1748,1426,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=6.83295e-06;MQSB=0.332317;RPB=0.859137;SGB=24.6155;VDB=0.912922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN3449-S SNP A -> T AC=1;AN=184;BQB=0.994992;DP=2367;DP4=1053,1254,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.00381524;MQSB=0.401474;RPB=0.940387;SGB=-34.7957;VDB=0.125976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN3557-S SNP A -> T AC=2;AN=188;BQB=0.888119;DP=2455;DP4=1088,1290,12,18;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=3.42529e-05;MQSB=0.998805;RPB=0.15823;SGB=61.6823;VDB=0.00104763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN3723-S SNP A -> T AC=2;AN=190;BQB=0.982012;DP=2548;DP4=1195,1281,12,13;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=5.031e-05;MQSB=0.998217;RPB=0.769673;SGB=108.296;VDB=0.292704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN3834-S SNP A -> T AC=2;AN=190;BQB=0.91372;DP=2566;DP4=1158,1321,10,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=0.000555091;MQSB=0.392639;RPB=0.854148;SGB=68.0854;VDB=0.601496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN3864-S SNP A -> T AC=1;AN=158;BQB=0.847273;DP=2160;DP4=990,1107,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0;MQB=0.00236347;MQSB=0.725198;RPB=0.879992;SGB=38.3284;VDB=0.0797975;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN692-S Single Base Substitution A-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN804-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN804-S Single Base Substitution A-T INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN921-S.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 FN921-S Single Base Substitution A-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. W591-4-1.SNP.6:16196322 chr06:016196322 0 W/16196322-16196322 W591-4-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN395-S.SNP.6:16203508 chr06:016203508 0 W/16203508-16203508 FN395-S Single Base Substitution C-T INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3637-S.SNP.6:16205704 chr06:016205704 0 W/16205704-16205704 FN3637-S SNP C -> T AC=1;AN=190;BQB=0.998977;DP=2341;DP4=1168,1086,1,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.34148e-05;MQSB=0.761503;RPB=0.719922;SGB=35.4339;VDB=0.0387577;EFF=INTRON(MODIFIER||||115|LOC_Os06g28500|protein_coding|CODING|LOC_Os06g28500.1|1|1) FN3460-S.SNP.6:16205899 chr06:016205899 0 W/16205899-16205899 FN3460-S SNP G -> A AC=1;AN=184;BQB=0.649541;DP=3464;DP4=1873,1491,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00227041;MQSB=0.845806;RPB=0.988463;SGB=30.6558;VDB=0.310231;EFF=INTRON(MODIFIER||||115|LOC_Os06g28500|protein_coding|CODING|LOC_Os06g28500.1|1|1) FN-67.SNP.6:16208063 chr06:016208063 0 W/16208063-16208063 FN-67 Single Base Substitution C-T INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN4178-S.SNP.6:16214887 chr06:016214887 0 W/16214887-16214887 FN4178-S SNP C -> T AC=1;AN=170;BQB=0.773026;DP=2324;DP4=1008,1116,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000430293;MQB=4.30456e-06;MQSB=0.969072;RPB=0.726625;SGB=21.1076;VDB=0.138791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.6:16221308 chr06:016221308 0 W/16221308-16221308 FN2550-S SNP C -> T AC=1;AN=198;BQB=0.423505;DP=4146;DP4=2014,1913,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.06413e-08;MQSB=0.990442;RPB=0.930254;SGB=6.15916;VDB=0.996716;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.6:16222566 chr06:016222566 0 W/16222566-16222566 FN4183-S SNP C -> A AC=1;AN=170;BQB=0.159727;DP=1541;DP4=781,654,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.0012938;MQSB=0.947145;RPB=0.457647;SGB=-2.88077;VDB=0.713674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.6:16224169 chr06:016224169 0 W/16224169-16224169 FN2173-S SNP G -> C AC=1;AN=168;BQB=0.451685;DP=2033;DP4=505,1468,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00196754;MQB=4.29945e-06;MQSB=0.00019657;RPB=0.575417;SGB=-35.5206;VDB=0.045269;EFF=UTR_5_PRIME(MODIFIER||298||92|LOC_Os06g28524|protein_coding|CODING|LOC_Os06g28524.1|1|1) FN2149-S.SNP.6:16233002 chr06:016233002 0 W/16233002-16233002 FN2149-S SNP C -> T AC=1;AN=168;BQB=0.49767;DP=3149;DP4=1460,1645,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00730391;MQB=5.29493e-08;MQSB=0.971575;RPB=0.953992;SGB=8.48315;VDB=0.387786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.6:16239120 chr06:016239120 0 W/16239120-16239120 FN3538-S SNP T -> C AC=1;AN=188;BQB=4.633e-05;DP=2522;DP4=1102,1270,3,19;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=6.38485e-09;MQSB=0.102805;RPB=0.276466;SGB=14.798;VDB=0.126624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.6:16241804 chr06:016241804 0 W/16241804-16241804 FN2638-S SNP C -> G AC=1;AN=200;BQB=0.97608;DP=5184;DP4=2754,2184,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000192901;MQB=1.24258e-14;MQSB=0.487041;RPB=0.948794;SGB=79.9264;VDB=0.096554;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.6:16245491 chr06:016245491 0 W/16245491-16245491 FN2408 SNP G -> A AC=1;AN=200;BQB=0.833983;DP=4835;DP4=2273,2258,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01511e-09;MQSB=0.999918;RPB=0.98772;SGB=-14.3206;VDB=0.715921;EFF=INTRON(MODIFIER||||215|LOC_Os06g28550|protein_coding|CODING|LOC_Os06g28550.1|3|1) FN491-S.SNP.6:16251081 chr06:016251081 0 W/16251081-16251081 FN491-S Single Base Substitution C-T INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN1006-S.SNP.6:16253122 chr06:016253122 0 W/16253122-16253122 FN1006-S Single Base Substitution A-C INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2329.SNP.6:16255759 chr06:016255759 0 W/16255759-16255759 FN2329 SNP A -> T AC=1;AN=192;BQB=0.986807;DP=5007;DP4=2088,2545,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.6708e-11;MQSB=0.918407;RPB=0.391883;SGB=36.607;VDB=0.914737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.6:16270505 chr06:016270505 0 W/16270505-16270505 FN2290 SNP C -> T AC=1;AN=192;BQB=0.848643;DP=4749;DP4=2402,2108,16,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.27001e-10;MQSB=0.97197;RPB=0.893068;SGB=-37.0704;VDB=0.597679;EFF=INTRON(MODIFIER||||761|LOC_Os06g28590|protein_coding|CODING|LOC_Os06g28590.2|1|1),INTRON(MODIFIER||||761|LOC_Os06g28590|protein_coding|CODING|LOC_Os06g28590.1|1|1),INTRON(MODIFIER||||761|LOC_Os06g28590|protein_coding|CODING|LOC_Os06g28590.3|1|1) FN3425-S.SNP.6:16275331 chr06:016275331 0 W/16275331-16275331 FN3425-S SNP T -> C AC=1;AN=184;BQB=0.558444;DP=2912;DP4=1628,1200,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.79226e-07;MQSB=0.839918;RPB=0.813565;SGB=66.8296;VDB=0.831558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.6:16289118 chr06:016289118 0 W/16289118-16289118 FN1414-S Single Base Substitution A-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3514-S.SNP.6:16289604 chr06:016289604 0 W/16289604-16289604 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.948271;DP=2868;DP4=1294,1504,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.62684e-10;MQSB=0.99207;RPB=0.315304;SGB=62.6088;VDB=0.264168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.6:16304035 chr06:016304035 0 W/16304035-16304035 FN2302 SNP T -> C AC=1;AN=192;BQB=0.0736672;DP=5185;DP4=2365,2460,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.56501e-18;MQSB=0.991008;RPB=0.879552;SGB=93.2452;VDB=0.186729;EFF=INTRON(MODIFIER||||84|LOC_Os06g28630|protein_coding|CODING|LOC_Os06g28630.1|1|1) FN1478-S.SNP.6:16306382 chr06:016306382 0 W/16306382-16306382 FN1478-S Single Base Substitution G-T INTERGENIC Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN432-S.SNP.6:16322523 chr06:016322523 0 W/16322523-16322523 FN432-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g28660 retrotransposon protein, putative, unclassified, expressed SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-284.SNP.6:16322937 chr06:016322937 0 W/16322937-16322937 FN-284 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g28660 retrotransposon protein, putative, unclassified, expressed SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3538-S.SNP.6:16329316 chr06:016329316 0 W/16329316-16329316 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.972765;DP=2959;DP4=1554,1286,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.39628e-05;MQSB=0.992817;RPB=0.377527;SGB=35.3493;VDB=0.105288;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.6:16334201 chr06:016334201 0 W/16334201-16334201 FN1056-S Single Base Substitution G-C INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3631-S.SNP.6:16337015 chr06:016337015 0 W/16337015-16337015 FN3631-S SNP G -> A AC=2;AN=190;BQB=0.928678;DP=3110;DP4=1411,1534,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.44731e-12;MQSB=0.989124;RPB=0.769641;SGB=31.3213;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.6:16352557 chr06:016352557 0 W/16352557-16352557 FN4182-S SNP G -> A AC=2;AN=170;BQB=0.98823;DP=2670;DP4=1327,1262,20,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.26866e-17;MQSB=0.847497;RPB=0.798322;SGB=103.731;VDB=0.345237;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C57Y|212|LOC_Os06g28720|protein_coding|CODING|LOC_Os06g28720.1|1|1) FN-71.SNP.6:16355098 chr06:016355098 0 W/16355098-16355098 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1366-S.SNP.6:16359953 chr06:016359953 0 W/16359953-16359953 FN1366-S Single Base Substitution C-T INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2253-S.SNP.6:16368698 chr06:016368698 0 W/16368698-16368698 FN2253-S SNP A -> G AC=1;AN=190;BQB=0.957638;DP=5326;DP4=2402,2532,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.40403e-05;MQSB=0.920388;RPB=0.987987;SGB=8.33661;VDB=0.249799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.6:16374435 chr06:016374435 0 W/16374435-16374435 FN2562-S SNP T -> C AC=1;AN=198;BQB=0.822739;DP=4240;DP4=2037,2041,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00636792;MQB=2.25683e-10;MQSB=0.018014;RPB=0.541999;SGB=95.5;VDB=0.210153;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I425V|852|LOC_Os06g28750|protein_coding|CODING|LOC_Os06g28750.1|6|1) FN2483.SNP.6:16379152 chr06:016379152 0 W/16379152-16379152 FN2483 SNP A -> T AC=1;AN=200;BQB=0.696955;DP=4877;DP4=2236,2362,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43024e-11;MQSB=0.764061;RPB=0.952149;SGB=69.1109;VDB=0.587359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.6:16379508 chr06:016379508 0 W/16379508-16379508 FN2282 SNP A -> G AC=1;AN=192;BQB=0.845498;DP=4773;DP4=1934,2317,21,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.13822e-16;MQSB=0.997674;RPB=0.220481;SGB=-5.17475;VDB=0.722029;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.6:16381346 chr06:016381346 0 W/16381346-16381346 FN-294 Single Base Substitution A-G INTRON HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3751-S.SNP.6:16386347 chr06:016386347 0 W/16386347-16386347 FN3751-S SNP G -> C AC=2;AN=190;BQB=0.966275;DP=3931;DP4=1665,2072,17,21;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.19394e-11;MQSB=1.24118e-07;RPB=0.403588;SGB=167.496;VDB=0.379019;EFF=INTRON(MODIFIER||||193|LOC_Os06g28770|protein_coding|CODING|LOC_Os06g28770.1|4|1) FN3725-S.SNP.6:16386396 chr06:016386396 0 W/16386396-16386396 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.999744;DP=3288;DP4=1361,1795,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000706586;MQSB=0.000287842;RPB=0.729096;SGB=53.6492;VDB=0.978569;EFF=INTRON(MODIFIER||||193|LOC_Os06g28770|protein_coding|CODING|LOC_Os06g28770.1|4|1) FN-243.SNP.6:16386469 chr06:016386469 0 W/16386469-16386469 FN-243 Single Base Substitution C-A UTR_3_PRIME HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN891-S.SNP.6:16386596 chr06:016386596 0 W/16386596-16386596 FN891-S Single Base Substitution G-T INTRON HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2233-S.SNP.6:16393294 chr06:016393294 0 W/16393294-16393294 FN2233-S SNP T -> C AC=1;AN=190;BQB=0.941861;DP=4650;DP4=1952,2438,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0915e-07;MQSB=0.00185568;RPB=0.505986;SGB=36.1006;VDB=0.0180119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.6:16395830 chr06:016395830 0 W/16395830-16395830 FN1214-S Single Base Substitution A-T INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1214-S.SNP.6:16395831 chr06:016395831 0 W/16395831-16395831 FN1214-S Single Base Substitution C-T INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN3822-S.SNP.6:16395871 chr06:016395871 0 W/16395871-16395871 FN3822-S SNP A -> G AC=1;AN=190;BQB=0.919279;DP=2831;DP4=1293,1432,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.90805e-08;MQSB=0.786562;RPB=0.56927;SGB=67.3108;VDB=0.0273861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.6:16397727 chr06:016397727 0 W/16397727-16397727 FN3398-S SNP T -> G AC=1;AN=184;BQB=0.158942;DP=3136;DP4=1382,1390,18,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49651e-08;MQSB=0.809853;RPB=0.982371;SGB=-111.214;VDB=0.989516;EFF=INTRON(MODIFIER||||317|LOC_Os06g28800|protein_coding|CODING|LOC_Os06g28800.1|3|1) FN3398-S.SNP.6:16397728 chr06:016397728 0 W/16397728-16397728 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.718873;DP=3133;DP4=1615,1446,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55328e-07;MQSB=0.719425;RPB=0.970534;SGB=35.7479;VDB=0.939603;EFF=INTRON(MODIFIER||||317|LOC_Os06g28800|protein_coding|CODING|LOC_Os06g28800.1|3|1) FN1638-S.SNP.6:16398731 chr06:016398731 0 W/16398731-16398731 FN1638-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1638-S.SNP.6:16398732 chr06:016398732 0 W/16398732-16398732 FN1638-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1379-S.SNP.6:16401373 chr06:016401373 0 W/16401373-16401373 FN1379-S Single Base Substitution T-C INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN526-S.SNP.6:16409190 chr06:016409190 0 W/16409190-16409190 FN526-S Single Base Substitution A-G INTRON HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2686-S.SNP.6:16414547 chr06:016414547 0 W/16414547-16414547 FN2686-S SNP A -> T AC=1;AN=200;BQB=0.0359301;DP=5033;DP4=2392,2427,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.16276e-07;MQSB=0.999877;RPB=0.961287;SGB=-16.7412;VDB=0.143863;EFF=INTRON(MODIFIER||||293|LOC_Os06g28820|protein_coding|CODING|LOC_Os06g28820.1|11|1) FN2648-S.SNP.6:16421327 chr06:016421327 0 W/16421327-16421327 FN2648-S SNP C -> A AC=1;AN=200;BQB=0.819166;DP=4819;DP4=2554,2033,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19458e-14;MQSB=0.976018;RPB=0.998617;SGB=72.7161;VDB=0.213937;EFF=INTRON(MODIFIER||||293|LOC_Os06g28820|protein_coding|CODING|LOC_Os06g28820.1|6|1) FN2207-S.SNP.6:16428163 chr06:016428163 0 W/16428163-16428163 FN2207-S SNP C -> T AC=2;AN=190;BQB=0.460445;DP=4121;DP4=2356,1342,20,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.10786e-14;MQSB=0.867614;RPB=0.962372;SGB=78.7471;VDB=0.31011;EFF=INTRON(MODIFIER||||293|LOC_Os06g28820|protein_coding|CODING|LOC_Os06g28820.1|1|1) FN881-S.SNP.6:16428866 chr06:016428866 0 W/16428866-16428866 FN881-S Single Base Substitution T-C INTRON HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2179-S.SNP.6:16429187 chr06:016429187 0 W/16429187-16429187 FN2179-S SNP T -> C AC=1;AN=168;BQB=0.0148851;DP=3836;DP4=1913,1879,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.21854e-09;MQSB=0.950501;RPB=0.880858;SGB=-42.3508;VDB=0.984124;EFF=INTRON(MODIFIER||||293|LOC_Os06g28820|protein_coding|CODING|LOC_Os06g28820.1|1|1) FN1655-S.SNP.6:16435643 chr06:016435643 0 W/16435643-16435643 FN1655-S Single Base Substitution C-T INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1557-S.SNP.6:16437343 chr06:016437343 0 W/16437343-16437343 FN1557-S Single Base Substitution C-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-64.SNP.6:16449836 chr06:016449836 0 W/16449836-16449836 FN-64 Single Base Substitution A-T INTRON HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN879-S.SNP.6:16451873 chr06:016451873 0 W/16451873-16451873 FN879-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g28860 retrotransposon protein, putative, unclassified, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3733-S.SNP.6:16451928 chr06:016451928 0 W/16451928-16451928 FN3733-S SNP C -> T AC=1;AN=190;BQB=0.944745;DP=2553;DP4=1184,1295,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000391696;MQB=1.18458e-09;MQSB=0.928251;RPB=0.907369;SGB=62.7569;VDB=0.53426;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L326|359|LOC_Os06g28860|protein_coding|CODING|LOC_Os06g28860.1|4|1) FN3757-S.SNP.6:16454191 chr06:016454191 0 W/16454191-16454191 FN3757-S SNP T -> A AC=1;AN=190;BQB=0.990419;DP=2939;DP4=1484,1392,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.435e-07;MQSB=0.978489;RPB=0.918736;SGB=39.9877;VDB=0.921479;EFF=INTERGENIC(MODIFIER||||||||||1) FN-33.SNP.6:16456434 chr06:016456434 0 W/16456434-16456434 FN-33 Single Base Substitution A-T INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN598-S.SNP.6:16463973 chr06:016463973 0 W/16463973-16463973 FN598-S Single Base Substitution G-A INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN1412-S.SNP.6:16466193 chr06:016466193 0 W/16466193-16466193 FN1412-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1635-S.SNP.6:16472103 chr06:016472103 0 W/16472103-16472103 FN1635-S SNP C -> T AC=1;AN=188;BQB=0.0139199;DP=3858;DP4=2163,1670,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00554452;MQSB=0.99893;RPB=0.368637;SGB=-34.1676;VDB=0.46743;EFF=INTRON(MODIFIER||||201|LOC_Os06g28880|protein_coding|CODING|LOC_Os06g28880.1|4|1),INTRON(MODIFIER||||188|LOC_Os06g28880|protein_coding|CODING|LOC_Os06g28880.2|8|1),INTRON(MODIFIER||||113|LOC_Os06g28880|protein_coding|CODING|LOC_Os06g28880.3|5|1) FN-63.SNP.6:16478547 chr06:016478547 0 W/16478547-16478547 FN-63 Single Base Substitution C-T INTRON HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1097-S.SNP.6:16480255 chr06:016480255 0 W/16480255-16480255 FN1097-S Single Base Substitution G-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2128-S.SNP.6:16481475 chr06:016481475 0 W/16481475-16481475 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.435169;DP=2107;DP4=1235,833,14,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.49053e-05;MQSB=0.989685;RPB=0.782568;SGB=24.6155;VDB=0.991355;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E94|233|LOC_Os06g28890|protein_coding|CODING|LOC_Os06g28890.1|1|1),UTR_5_PRIME(MODIFIER||2494||188|LOC_Os06g28880|protein_coding|CODING|LOC_Os06g28880.2|1|1),UTR_5_PRIME(MODIFIER||3565||113|LOC_Os06g28880|protein_coding|CODING|LOC_Os06g28880.3|1|1) FN3875-S.SNP.6:16488812 chr06:016488812 0 W/16488812-16488812 FN3875-S SNP G -> A AC=1;AN=158;BQB=0.927144;DP=2836;DP4=1439,1314,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00528914;MQB=8.65864e-09;MQSB=0.296785;RPB=0.997317;SGB=73.2838;VDB=0.971084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.6:16502878 chr06:016502878 0 W/16502878-16502878 FN3903-S SNP G -> A AC=2;AN=158;BQB=0.850902;DP=2371;DP4=1067,1227,11,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.40082e-19;MQSB=0.995151;RPB=0.178736;SGB=134.456;VDB=0.299465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A69T|126|LOC_Os06g28940|protein_coding|CODING|LOC_Os06g28940.1|2|1) FN2754-S.SNP.6:16512091 chr06:016512091 0 W/16512091-16512091 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.854053;DP=5208;DP4=2397,2588,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.20603e-11;MQSB=0.722274;RPB=0.932544;SGB=81.8956;VDB=0.0101674;EFF=INTRON(MODIFIER||||166|LOC_Os06g28970|protein_coding|CODING|LOC_Os06g28970.1|2|1) FN3380-S.SNP.6:16518926 chr06:016518926 0 W/16518926-16518926 FN3380-S SNP C -> A AC=1;AN=184;BQB=0.81849;DP=2754;DP4=1415,1277,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000363108;MQB=2.4403e-08;MQSB=0.997885;RPB=0.741532;SGB=18.2315;VDB=0.882372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.6:16519645 chr06:016519645 0 W/16519645-16519645 FN3380-S SNP A -> T AC=1;AN=184;BQB=0.974721;DP=3226;DP4=1601,1499,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.43006e-05;MQSB=0.999976;RPB=0.888425;SGB=21.6609;VDB=0.280204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.6:16519646 chr06:016519646 0 W/16519646-16519646 FN3380-S SNP G -> T AC=1;AN=184;BQB=0.954349;DP=3215;DP4=1616,1513,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.6905e-05;MQSB=0.99824;RPB=0.853272;SGB=26.1347;VDB=0.571008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.6:16526694 chr06:016526694 0 W/16526694-16526694 FN3324-S SNP G -> A AC=2;AN=184;BQB=0.871452;DP=3813;DP4=1828,1868,14,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000524521;MQB=1.96591e-12;MQSB=0.980087;RPB=0.783622;SGB=89.4385;VDB=0.668637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.6:16528883 chr06:016528883 0 W/16528883-16528883 FN1748-S SNP A -> G AC=1;AN=188;BQB=0.975726;DP=4050;DP4=2029,1987,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.000246914;MQB=6.05915e-06;MQSB=0.00741247;RPB=0.450283;SGB=-12.2833;VDB=0.267191;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K156E|373|LOC_Os06g29000|protein_coding|CODING|LOC_Os06g29000.1|2|1) FN2289.SNP.6:16531426 chr06:016531426 0 W/16531426-16531426 FN2289 SNP G -> C AC=1;AN=192;BQB=0.916365;DP=5018;DP4=2489,2198,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.62171e-13;MQSB=0.990633;RPB=0.864467;SGB=93.2452;VDB=0.774384;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.6:16539010 chr06:016539010 0 W/16539010-16539010 FN1175-S Single Base Substitution G-A INTRON HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2304.SNP.6:16545264 chr06:016545264 0 W/16545264-16545264 FN2304 SNP C -> T AC=1;AN=192;BQB=0.744092;DP=4901;DP4=2257,2362,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.90195e-09;MQSB=0.640776;RPB=0.702488;SGB=34.0426;VDB=0.453649;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D167|850|LOC_Os06g29030|protein_coding|CODING|LOC_Os06g29030.1|1|1) FN2180-S.SNP.6:16547640 chr06:016547640 0 W/16547640-16547640 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.873025;DP=4796;DP4=2266,2305,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.95592e-07;MQSB=0.971201;RPB=0.431908;SGB=49.0954;VDB=0.564756;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D704|850|LOC_Os06g29030|protein_coding|CODING|LOC_Os06g29030.1|5|1) FN1633-S.SNP.6:16563951 chr06:016563951 0 W/16563951-16563951 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2663-S.SNP.6:16565115 chr06:016565115 0 W/16565115-16565115 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.598603;DP=4694;DP4=2201,2182,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13787e-10;MQSB=0.990473;RPB=0.882812;SGB=77.2904;VDB=0.796835;EFF=INTRON(MODIFIER||||518|LOC_Os06g29060|protein_coding|CODING|LOC_Os06g29060.1|3|1) FN1750-S.SNP.6:16571603 chr06:016571603 0 W/16571603-16571603 FN1750-S SNP G -> A AC=2;AN=188;BQB=0.943598;DP=2819;DP4=1404,1370,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.55411e-17;MQSB=0.95897;RPB=0.34754;SGB=64.2256;VDB=0.945242;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.6:16571764 chr06:016571764 0 W/16571764-16571764 FN4258-S SNP G -> A AC=2;AN=170;BQB=0.999381;DP=2697;DP4=1300,1275,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.54558e-13;MQSB=0.703101;RPB=0.999659;SGB=41.8678;VDB=0.991856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.6:16577796 chr06:016577796 0 W/16577796-16577796 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.94691;DP=2729;DP4=1350,1270,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92002e-07;MQSB=0.945949;RPB=0.999895;SGB=62.3078;VDB=0.784707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.6:16586458 chr06:016586458 0 W/16586458-16586458 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.409976;DP=4981;DP4=2350,2312,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22861e-13;MQSB=0.388755;RPB=0.899036;SGB=76.3213;VDB=0.23019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.6:16595162 chr06:016595162 0 W/16595162-16595162 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.963652;DP=3168;DP4=1405,1605,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.81288e-11;MQSB=0.912332;RPB=0.924135;SGB=90.0802;VDB=0.562593;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN-108.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN-108 Single Base Substitution T-A INTRON HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-94.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN-94 Single Base Substitution T-A INTRON HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1039-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN1039-S Single Base Substitution T-A INTRON HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1131-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN1131-S Single Base Substitution T-A INTRON HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1460-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN1460-S Single Base Substitution T-A INTRON HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1512-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN1512-S Single Base Substitution T-A INTRON Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1590-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN1590-S Single Base Substitution T-A INTRON Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN2169-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN2169-S SNP T -> A AC=2;AN=168;BQB=0.314065;DP=3526;DP4=1732,1745,8,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.39086e-09;MQSB=0.970421;RPB=0.851325;SGB=36.7696;VDB=0.37404;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN2437.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN2437 SNP T -> A AC=1;AN=200;BQB=0.92053;DP=5023;DP4=2671,2156,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199084;MQB=3.88693e-11;MQSB=0.998053;RPB=0.982839;SGB=61.9006;VDB=0.277213;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN267-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN267-S Single Base Substitution T-A INTRON HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3282-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN3282-S SNP T -> A AC=2;AN=184;BQB=0.159967;DP=3073;DP4=1800,1185,20,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.29786e-14;MQSB=0.832014;RPB=0.933938;SGB=71.1891;VDB=0.415784;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN3727-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN3727-S SNP T -> A AC=1;AN=190;BQB=0.986109;DP=3222;DP4=1723,1419,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.52785e-08;MQSB=0.86426;RPB=0.99976;SGB=21.1058;VDB=0.59783;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN3773-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN3773-S SNP T -> A AC=1;AN=190;BQB=0.965755;DP=2920;DP4=1638,1203,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07812e-08;MQSB=0.99122;RPB=0.979525;SGB=71.8647;VDB=0.888167;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN4302-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN4302-S SNP T -> A AC=2;AN=170;BQB=0.643938;DP=2473;DP4=1530,885,6,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.99076e-07;MQSB=0.904225;RPB=0.99981;SGB=56.7575;VDB=0.851906;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|2|1) FN444-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN444-S Single Base Substitution T-A INTRON HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN504-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN504-S Single Base Substitution T-A INTRON HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN625-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN625-S Single Base Substitution T-A INTRON HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN772-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN772-S Single Base Substitution T-A INTRON HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN952-S.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN952-S Single Base Substitution T-A INTRON HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN_N1-151-7.SNP.6:16595957 chr06:016595957 0 W/16595957-16595957 FN_N1-151-7 Single Base Substitution T-A Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1389-S.SNP.6:16596929 chr06:016596929 0 W/16596929-16596929 FN1389-S Single Base Substitution T-G INTRON Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3905-S.SNP.6:16598584 chr06:016598584 0 W/16598584-16598584 FN3905-S SNP A -> T AC=1;AN=158;BQB=0.562077;DP=2532;DP4=1111,1246,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.81761e-05;MQSB=0.330694;RPB=0.584126;SGB=27.3346;VDB=0.658291;EFF=INTRON(MODIFIER||||540|LOC_Os06g29110|protein_coding|CODING|LOC_Os06g29110.1|13|1) FN1670-S.SNP.6:16600237 chr06:016600237 0 W/16600237-16600237 FN1670-S SNP G -> T AC=1;AN=188;BQB=0.101932;DP=3309;DP4=1800,1476,16,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.5949e-09;MQSB=0.726671;RPB=0.967097;SGB=-67.7293;VDB=0.799492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.6:16601602 chr06:016601602 0 W/16601602-16601602 FN1049-S Single Base Substitution A-G INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3844-S.SNP.6:16613981 chr06:016613981 0 W/16613981-16613981 FN3844-S SNP A -> G AC=1;AN=190;BQB=0.691409;DP=2545;DP4=1190,1232,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1669e-08;MQSB=0.999784;RPB=0.775973;SGB=4.11112;VDB=0.788874;EFF=INTRON(MODIFIER||||693|LOC_Os06g29120|protein_coding|CODING|LOC_Os06g29120.1|2|1),INTRON(MODIFIER||||693|LOC_Os06g29120|protein_coding|CODING|LOC_Os06g29120.2|2|1) FN3819-S.SNP.6:16617719 chr06:016617719 0 W/16617719-16617719 FN3819-S SNP T -> C AC=1;AN=190;BQB=0.992443;DP=2448;DP4=1262,1114,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15969e-08;MQSB=0.999839;RPB=0.854289;SGB=53.6492;VDB=0.431098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.6:16633843 chr06:016633843 0 W/16633843-16633843 FN2435 SNP T -> C AC=2;AN=200;BQB=0.954577;DP=4253;DP4=1969,1882,29,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.10143e-31;MQSB=0.998521;RPB=0.999725;SGB=123.271;VDB=0.595439;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D249|1103|LOC_Os06g29150|protein_coding|CODING|LOC_Os06g29150.1|2|1) FN2085-S.SNP.6:16638126 chr06:016638126 0 W/16638126-16638126 FN2085-S SNP C -> A AC=2;AN=168;BQB=0.857677;DP=2388;DP4=1073,1247,21,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.3286e-16;MQSB=0.836274;RPB=0.743516;SGB=-8.04863;VDB=0.313998;EFF=INTRON(MODIFIER||||408|LOC_Os06g29160|protein_coding|CODING|LOC_Os06g29160.1|2|1) FN-375.SNP.6:16641227 chr06:016641227 0 W/16641227-16641227 FN-375 Single Base Substitution G-C INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3457-S.SNP.6:16653825 chr06:016653825 0 W/16653825-16653825 FN3457-S SNP G -> A AC=2;AN=184;BQB=0.977133;DP=2512;DP4=1220,1045,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.21595e-11;MQSB=0.540168;RPB=0.531998;SGB=67.4439;VDB=0.993886;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.6:16658555 chr06:016658555 0 W/16658555-16658555 FN-149 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g29190 expressed protein SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1483-S.SNP.6:16660961 chr06:016660961 0 W/16660961-16660961 FN1483-S Single Base Substitution T-C INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1037-S.SNP.6:16661643 chr06:016661643 0 W/16661643-16661643 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN449-S.SNP.6:16663852 chr06:016663852 0 W/16663852-16663852 FN449-S Single Base Substitution C-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3855-S.SNP.6:16671814 chr06:016671814 0 W/16671814-16671814 FN3855-S SNP T -> C AC=1;AN=158;BQB=0.665299;DP=2946;DP4=1475,1351,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0431093;MQB=0.937378;MQSB=2.40098e-05;RPB=0.409844;SGB=21.4493;VDB=0.597163;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L917|1828|LOC_Os06g29210|protein_coding|CODING|LOC_Os06g29210.1|2|1) FN3415-S.SNP.6:16676872 chr06:016676872 0 W/16676872-16676872 FN3415-S SNP C -> T AC=2;AN=184;BQB=0.997744;DP=2751;DP4=1280,1411,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.30967e-10;MQSB=0.999012;RPB=0.999815;SGB=66.8296;VDB=0.992071;EFF=UTR_5_PRIME(MODIFIER||154||378|LOC_Os06g29220|protein_coding|CODING|LOC_Os06g29220.1|1|1) FN1301-S.SNP.6:16678869 chr06:016678869 0 W/16678869-16678869 FN1301-S Single Base Substitution C-T INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4234-S.SNP.6:16685113 chr06:016685113 0 W/16685113-16685113 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.995549;DP=2652;DP4=1383,1180,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3314e-08;MQSB=0.998954;RPB=0.99407;SGB=41.7633;VDB=0.128791;EFF=INTERGENIC(MODIFIER||||||||||1) FN1742-S.SNP.6:16686291 chr06:016686291 0 W/16686291-16686291 FN1742-S SNP C -> T AC=1;AN=188;BQB=0.363235;DP=2841;DP4=1399,1410,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.58935e-08;MQSB=0.801145;RPB=0.952494;SGB=14.798;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.6:16686816 chr06:016686816 0 W/16686816-16686816 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.625669;DP=3148;DP4=1530,1544,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.77364e-07;MQSB=0.999029;RPB=0.997932;SGB=66.8296;VDB=0.988449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.6:16696899 chr06:016696899 0 W/16696899-16696899 FN3782-S SNP C -> A AC=1;AN=190;BQB=0.944412;DP=2659;DP4=1254,1317,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.15812e-06;MQSB=0.977338;RPB=0.968547;SGB=21.8853;VDB=0.0745613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.6:16698171 chr06:016698171 0 W/16698171-16698171 FN1665-S Single Base Substitution T-C INTRON HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2314.SNP.6:16700478 chr06:016700478 0 W/16700478-16700478 FN2314 SNP G -> A AC=1;AN=192;BQB=0.866066;DP=5108;DP4=2071,2547,9,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.32141e-13;MQSB=0.802038;RPB=0.999993;SGB=22.9983;VDB=0.970897;EFF=INTRON(MODIFIER||||70|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.2|1|1),INTRON(MODIFIER||||57|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.4|1|1),INTRON(MODIFIER||||73|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.1|1|1),INTRON(MODIFIER||||117|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.3|1|1) FN3788-S.SNP.6:16703543 chr06:016703543 0 W/16703543-16703543 FN3788-S SNP C -> T AC=1;AN=190;BQB=0.928091;DP=2969;DP4=1490,1346,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73825e-05;MQSB=0.82511;RPB=0.517011;SGB=30.8803;VDB=0.0633369;EFF=INTRON(MODIFIER||||117|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.3|1|1) FN490-S.SNP.6:16704622 chr06:016704622 0 W/16704622-16704622 FN490-S Single Base Substitution A-G INTRON HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN3990-S.SNP.6:16708280 chr06:016708280 0 W/16708280-16708280 FN3990-S SNP A -> T AC=2;AN=168;BQB=0.925476;DP=2569;DP4=1308,1132,15,14;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00116777;MQB=4.14469e-13;MQSB=0.341963;RPB=0.805719;SGB=123.066;VDB=0.569314;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D775E|1266|LOC_Os06g29270|protein_coding|CODING|LOC_Os06g29270.1|6|1),INTRON(MODIFIER||||117|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.3|1|1) FN2735-S.SNP.6:16715294 chr06:016715294 0 W/16715294-16715294 FN2735-S SNP G -> A AC=1;AN=200;BQB=0.857476;DP=4656;DP4=2158,2266,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70963e-10;MQSB=0.347581;RPB=0.56072;SGB=81.8956;VDB=0.299995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A113T|117|LOC_Os06g29260|protein_coding|CODING|LOC_Os06g29260.3|3|1),INTRON(MODIFIER||||494|LOC_Os06g29280|protein_coding|CODING|LOC_Os06g29280.1|3|1) FN3481-S.SNP.6:16715773 chr06:016715773 0 W/16715773-16715773 FN3481-S SNP C -> A AC=2;AN=184;BQB=0.294814;DP=2816;DP4=1352,1362,17,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00213068;MQB=1.44159e-15;MQSB=0.758074;RPB=0.994221;SGB=109.705;VDB=0.812938;EFF=INTRON(MODIFIER||||494|LOC_Os06g29280|protein_coding|CODING|LOC_Os06g29280.1|2|1) FN1739-S.SNP.6:16716694 chr06:016716694 0 W/16716694-16716694 FN1739-S SNP G -> A AC=2;AN=188;BQB=0.334121;DP=3595;DP4=1111,2430,16,17;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0764951;MQB=0.507295;MQSB=1.74568e-27;RPB=0.831999;SGB=69.3122;VDB=0.79762;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q262*|494|LOC_Os06g29280|protein_coding|CODING|LOC_Os06g29280.1|1|1);LOF=(LOC_Os06g29280|LOC_Os06g29280|1|1.00);NMD=(LOC_Os06g29280|LOC_Os06g29280|1|1.00) FN319-S.SNP.6:16716694 chr06:016716694 0 W/16716694-16716694 FN319-S Single Base Substitution G-A STOP_GAINED HET LOC_Os06g29280 retrotransposon protein, putative, unclassified SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3597-S.SNP.6:16716694 chr06:016716694 0 W/16716694-16716694 FN3597-S SNP G -> A AC=2;AN=188;BQB=0.982126;DP=3230;DP4=1401,1739,18,18;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0396285;MQB=1.26368e-07;MQSB=6.93921e-24;RPB=0.969085;SGB=158.018;VDB=0.866102;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q262*|494|LOC_Os06g29280|protein_coding|CODING|LOC_Os06g29280.1|1|1);LOF=(LOC_Os06g29280|LOC_Os06g29280|1|1.00);NMD=(LOC_Os06g29280|LOC_Os06g29280|1|1.00) FN724-S.SNP.6:16720264 chr06:016720264 0 W/16720264-16720264 FN724-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g29300 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2606-S.SNP.6:16720994 chr06:016720994 0 W/16720994-16720994 FN2606-S SNP G -> C AC=1;AN=198;BQB=0.998547;DP=4319;DP4=2016,2033,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000733682;MQSB=0.381069;RPB=0.748189;SGB=31.1689;VDB=0.72859;EFF=INTRON(MODIFIER||||1466|LOC_Os06g29300|protein_coding|CODING|LOC_Os06g29300.1|7|1) FN3987-S.SNP.6:16723225 chr06:016723225 0 W/16723225-16723225 FN3987-S SNP C -> T AC=1;AN=168;BQB=0.946726;DP=2592;DP4=1215,1250,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00115741;MQB=3.75612e-06;MQSB=0.917561;RPB=0.860293;SGB=78.7577;VDB=0.583012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V1248I|1466|LOC_Os06g29300|protein_coding|CODING|LOC_Os06g29300.1|5|1) FN1175-S.SNP.6:16743810 chr06:016743810 0 W/16743810-16743810 FN1175-S Single Base Substitution A-T INTRON HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN399-S.SNP.6:16745719 chr06:016745719 0 W/16745719-16745719 FN399-S Single Base Substitution C-A INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN407-S.SNP.6:16746941 chr06:016746941 0 W/16746941-16746941 FN407-S Single Base Substitution C-T STOP_GAINED HET LOC_Os06g29320 retrotransposon protein, putative, unclassified, expressed SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2661-S.SNP.6:16753820 chr06:016753820 0 W/16753820-16753820 FN2661-S SNP A -> G AC=2;AN=200;BQB=0.996425;DP=4632;DP4=2560,1842,20,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.97861e-19;MQSB=0.861089;RPB=0.849278;SGB=160.183;VDB=0.965981;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.6:16769530 chr06:016769530 0 W/16769530-16769530 FN1644-S Single Base Substitution A-G INTRON Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN4152-S.SNP.6:16783965 chr06:016783965 0 W/16783965-16783965 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.984004;DP=2344;DP4=1048,1239,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.521e-05;MQSB=0.999707;RPB=0.781591;SGB=30.1021;VDB=0.369149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R1409K|1529|LOC_Os06g29350|protein_coding|CODING|LOC_Os06g29350.1|35|1) FN3941-S.SNP.6:16786645 chr06:016786645 0 W/16786645-16786645 FN3941-S SNP T -> G AC=1;AN=168;BQB=0.9988;DP=2519;DP4=992,1336,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.83454e-08;MQSB=0.741781;RPB=0.991488;SGB=22.1847;VDB=0.56545;EFF=INTRON(MODIFIER||||185|LOC_Os06g29360|protein_coding|CODING|LOC_Os06g29360.1|2|1) FN3413-S.SNP.6:16800978 chr06:016800978 0 W/16800978-16800978 FN3413-S SNP A -> T AC=2;AN=184;BQB=0.791932;DP=3054;DP4=1523,1288,19,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.20689e-19;MQSB=0.797298;RPB=0.191092;SGB=-2.71288;VDB=0.17016;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.6:16801586 chr06:016801586 0 W/16801586-16801586 FN-269 Single Base Substitution C-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. W598-2-1.SNP.6:16806983 chr06:016806983 0 W/16806983-16806983 W598-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-231.SNP.6:16808642 chr06:016808642 0 W/16808642-16808642 FN-231 Single Base Substitution G-C INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1009-S.SNP.6:16816900 chr06:016816900 0 W/16816900-16816900 FN1009-S Single Base Substitution A-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN4046-S.SNP.6:16818322 chr06:016818322 0 W/16818322-16818322 FN4046-S SNP G -> A AC=1;AN=168;BQB=0.439697;DP=2436;DP4=1316,1021,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00123153;MQB=0.00146451;MQSB=6.7004e-23;RPB=0.873539;SGB=5.62151;VDB=0.229853;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.6:16822381 chr06:016822381 0 W/16822381-16822381 FN1366-S Single Base Substitution C-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3511-S.SNP.6:16826450 chr06:016826450 0 W/16826450-16826450 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.977688;DP=2829;DP4=1356,1396,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74473e-08;MQSB=0.999518;RPB=0.936588;SGB=32.441;VDB=0.249604;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S862|984|LOC_Os06g29400|protein_coding|CODING|LOC_Os06g29400.1|16|1) FN2765-S.SNP.6:16836877 chr06:016836877 0 W/16836877-16836877 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.603475;DP=4585;DP4=2229,2139,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.88655e-10;MQSB=0.986184;RPB=0.914087;SGB=67.9293;VDB=0.990292;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.6:16845024 chr06:016845024 0 W/16845024-16845024 FN2582-S SNP A -> G AC=1;AN=198;BQB=0.154103;DP=3568;DP4=1681,1516,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000840807;MQB=0.00269513;MQSB=0.487526;RPB=0.912057;SGB=4.56404;VDB=0.582305;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.6:16851126 chr06:016851126 0 W/16851126-16851126 FN845-S Single Base Substitution C-A INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3892-S.SNP.6:16851510 chr06:016851510 0 W/16851510-16851510 FN3892-S SNP A -> T AC=1;AN=158;BQB=0.937028;DP=2214;DP4=1089,995,1,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.96091e-06;MQSB=0.997801;RPB=0.40859;SGB=33.9591;VDB=0.712841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.6:16864895 chr06:016864895 0 W/16864895-16864895 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.578808;DP=2825;DP4=1231,1517,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=8.22519e-05;MQSB=0.235666;RPB=0.999511;SGB=46.3132;VDB=0.325278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.6:16872151 chr06:016872151 0 W/16872151-16872151 FN2334 SNP G -> A AC=1;AN=192;BQB=0.284087;DP=5116;DP4=2280,2528,19,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.32151e-15;MQSB=0.644576;RPB=0.705914;SGB=-41.4269;VDB=0.344439;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.6:16876245 chr06:016876245 0 W/16876245-16876245 FN_949-1 Single Base Substitution T-G Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN589-S.SNP.6:16879651 chr06:016879651 0 W/16879651-16879651 FN589-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN589-S.SNP.6:16879652 chr06:016879652 0 W/16879652-16879652 FN589-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3355-S.SNP.6:16882444 chr06:016882444 0 W/16882444-16882444 FN3355-S SNP A -> G AC=1;AN=184;BQB=0.76899;DP=2823;DP4=1344,1352,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.93032e-08;MQSB=0.977976;RPB=0.483846;SGB=5.28054;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.6:16884905 chr06:016884905 0 W/16884905-16884905 FN-183 Single Base Substitution T-A INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN1302-S.SNP.6:16886542 chr06:016886542 0 W/16886542-16886542 FN1302-S Single Base Substitution A-G INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3505-S.SNP.6:16894255 chr06:016894255 0 W/16894255-16894255 FN3505-S SNP T -> A AC=1;AN=188;BQB=0.817273;DP=3380;DP4=1975,1272,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.09707e-08;MQSB=0.117279;RPB=0.672457;SGB=33.7061;VDB=0.640795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.6:16900607 chr06:016900607 0 W/16900607-16900607 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.509221;DP=3995;DP4=1815,1941,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.23031e-12;MQSB=0.684812;RPB=0.848506;SGB=95.5;VDB=0.163246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.6:16905057 chr06:016905057 0 W/16905057-16905057 FN1163-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3772-S.SNP.6:16905849 chr06:016905849 0 W/16905849-16905849 FN3772-S SNP T -> A AC=1;AN=188;BQB=0.978418;DP=2946;DP4=1469,1365,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=7.14161e-05;MQSB=4.05005e-06;RPB=0.880223;SGB=44.5415;VDB=0.523536;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.6:16906828 chr06:016906828 0 W/16906828-16906828 FN1431-S Single Base Substitution G-A INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-149.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN-149 Single Base Substitution T-A INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN-286.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN-286 Single Base Substitution T-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-375.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN-375 Single Base Substitution T-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-394.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN-394 Single Base Substitution T-A INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-87.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN-87 Single Base Substitution T-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1153-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN1153-S Single Base Substitution T-A INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1215-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN1215-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1416-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN1416-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN2785-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN2785-S SNP T -> A AC=2;AN=198;BQB=0.890431;DP=4700;DP4=1980,2448,27,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.81391e-28;MQSB=0.896438;RPB=0.981405;SGB=122.769;VDB=0.990985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN3323-S SNP T -> A AC=1;AN=184;BQB=0.583573;DP=2888;DP4=1283,1490,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.15124e-07;MQSB=0.940953;RPB=0.997796;SGB=39.2697;VDB=0.989605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN3468-S SNP T -> A AC=2;AN=184;BQB=0.302511;DP=2751;DP4=1229,1393,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.68279e-14;MQSB=0.961236;RPB=0.895804;SGB=99.14;VDB=0.241239;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN358-S Single Base Substitution T-A INTERGENIC HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN493-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN493-S Single Base Substitution T-A INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN666-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN666-S Single Base Substitution T-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN731-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN731-S Single Base Substitution T-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN848-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN848-S Single Base Substitution T-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN861-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN861-S Single Base Substitution T-A INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN968-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN968-S Single Base Substitution T-A INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN976-S.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 FN976-S Single Base Substitution T-A INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. W313-1-1-1-1.SNP.6:16917794 chr06:016917794 0 W/16917794-16917794 W313-1-1-1-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2185-S.SNP.6:16923403 chr06:016923403 0 W/16923403-16923403 FN2185-S SNP C -> T AC=2;AN=190;BQB=0.975101;DP=4788;DP4=2118,2277,24,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43846e-20;MQSB=0.999095;RPB=0.991993;SGB=135.609;VDB=0.77809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.6:16931063 chr06:016931063 0 W/16931063-16931063 FN3506-S SNP G -> A AC=1;AN=188;BQB=0.954979;DP=2542;DP4=1248,1238,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0468135;MQB=0.325451;MQSB=0.042021;RPB=0.770773;SGB=58.0655;VDB=0.454779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V168I|669|LOC_Os06g29550|protein_coding|CODING|LOC_Os06g29550.1|1|1) FN2698-S.SNP.6:16933699 chr06:016933699 0 W/16933699-16933699 FN2698-S SNP A -> T AC=1;AN=200;BQB=0.928642;DP=4478;DP4=2153,2116,26,28;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00200983;MQB=3.10735e-15;MQSB=0.840077;RPB=0.262263;SGB=8.67589;VDB=0.736408;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S134C|407|LOC_Os06g29560|protein_coding|CODING|LOC_Os06g29560.1|2|1) FN1665-S.SNP.6:16934678 chr06:016934678 0 W/16934678-16934678 FN1665-S Single Base Substitution G-T INTRON HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3713-S.SNP.6:16937570 chr06:016937570 0 W/16937570-16937570 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.989093;DP=2745;DP4=1338,1330,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.24983e-08;MQSB=0.98495;RPB=0.891503;SGB=58.2031;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.6:16939242 chr06:016939242 0 W/16939242-16939242 FN_812-4-1 Single Base Substitution C-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN459-S.SNP.6:16940258 chr06:016940258 0 W/16940258-16940258 FN459-S Single Base Substitution G-A INTRON HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN266-S.SNP.6:16943437 chr06:016943437 0 W/16943437-16943437 FN266-S Single Base Substitution T-C INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2320.SNP.6:16960515 chr06:016960515 0 W/16960515-16960515 FN2320 SNP G -> A AC=2;AN=192;BQB=0.999999;DP=4873;DP4=2243,2345,12,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.55582e-15;MQSB=0.987379;RPB=0.536953;SGB=26.127;VDB=0.77317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.6:16965851 chr06:016965851 0 W/16965851-16965851 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN-14.SNP.6:16966737 chr06:016966737 0 W/16966737-16966737 FN-14 Single Base Substitution G-A INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2420.SNP.6:16977379 chr06:016977379 0 W/16977379-16977379 FN2420 SNP C -> T AC=2;AN=200;BQB=0.785754;DP=4900;DP4=2474,2188,24,20;HOB=0.0198;ICB=0.495051;MQ=25;MQ0F=0.296735;MQB=0.884068;MQSB=0.00618251;RPB=0.684253;SGB=51.2243;VDB=0.043335;EFF=INTRON(MODIFIER||||1351|LOC_Os06g29600|protein_coding|CODING|LOC_Os06g29600.1|2|1) FN2596-S.SNP.6:16996204 chr06:016996204 0 W/16996204-16996204 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.979504;DP=3956;DP4=1935,1797,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.17129e-07;MQSB=0.15121;RPB=0.931102;SGB=6.15916;VDB=0.821693;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.6:17003061 chr06:017003061 0 W/17003061-17003061 FN762-S Single Base Substitution G-T INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1250-S.SNP.6:17003881 chr06:017003881 0 W/17003881-17003881 FN1250-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN4124-S.SNP.6:17007404 chr06:017007404 0 W/17007404-17007404 FN4124-S SNP T -> C AC=1;AN=182;BQB=0.130337;DP=4788;DP4=2379,2291,9,10;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.00438596;MQB=0.999998;MQSB=0.0745285;RPB=0.0553107;SGB=9.68217;VDB=0.0673076;EFF=INTRON(MODIFIER||||138|LOC_Os06g29650|protein_coding|CODING|LOC_Os06g29650.2|1|1),INTRON(MODIFIER||||138|LOC_Os06g29650|protein_coding|CODING|LOC_Os06g29650.1|1|1) FN4279-S.SNP.6:17011138 chr06:017011138 0 W/17011138-17011138 FN4279-S SNP C -> A AC=2;AN=170;BQB=0.835929;DP=2802;DP4=1331,1402,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.20612e-12;MQSB=0.838202;RPB=0.739267;SGB=72.7472;VDB=0.499812;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.6:17016216 chr06:017016216 0 W/17016216-17016216 FN-305 Single Base Substitution A-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3932-S.SNP.6:17026505 chr06:017026505 0 W/17026505-17026505 FN3932-S SNP C -> T AC=1;AN=158;BQB=0.973935;DP=2465;DP4=1185,1199,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000131287;MQSB=0.938376;RPB=0.215284;SGB=20.5959;VDB=0.00946171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.6:17027946 chr06:017027946 0 W/17027946-17027946 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.62956;DP=3055;DP4=1407,1525,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.52302e-11;MQSB=0.8103;RPB=0.996174;SGB=71.8647;VDB=0.367657;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.6:17028311 chr06:017028311 0 W/17028311-17028311 FN_552-1-1 Single Base Substitution T-C HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN828-S.SNP.6:17031500 chr06:017031500 0 W/17031500-17031500 FN828-S Single Base Substitution C-T INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3548-S.SNP.6:17031962 chr06:017031962 0 W/17031962-17031962 FN3548-S SNP C -> T AC=1;AN=188;BQB=0.865064;DP=4385;DP4=2171,2152,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.49107e-09;MQSB=0.899016;RPB=0.517562;SGB=76.2387;VDB=0.1125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.6:17037970 chr06:017037970 0 W/17037970-17037970 FN3523-S SNP G -> A AC=2;AN=188;BQB=0.807329;DP=3289;DP4=1725,1454,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.08802e-17;MQSB=0.581037;RPB=0.308981;SGB=103.307;VDB=0.0826735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.6:17039820 chr06:017039820 0 W/17039820-17039820 FN1366-S Single Base Substitution G-T INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1366-S.SNP.6:17039821 chr06:017039821 0 W/17039821-17039821 FN1366-S Single Base Substitution A-G INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2715-S.SNP.6:17047476 chr06:017047476 0 W/17047476-17047476 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.864707;DP=4919;DP4=2350,2291,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28626e-14;MQSB=0.719367;RPB=0.15999;SGB=20.7261;VDB=0.384976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.6:17048346 chr06:017048346 0 W/17048346-17048346 FN2581-S SNP G -> A AC=1;AN=198;BQB=0.978558;DP=4329;DP4=1977,2118,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.83258e-06;MQSB=0.98014;RPB=0.701391;SGB=29.3637;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.6:17049863 chr06:017049863 0 W/17049863-17049863 FN2469 SNP G -> A AC=2;AN=200;BQB=0.955464;DP=4822;DP4=2545,2019,25,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.5865e-23;MQSB=0.32038;RPB=0.997622;SGB=48.014;VDB=0.259451;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.6:17051996 chr06:017051996 0 W/17051996-17051996 FN2575-S SNP C -> T AC=2;AN=198;BQB=0.0890168;DP=3971;DP4=1993,1739,43,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.24201e-41;MQSB=0.996521;RPB=0.841183;SGB=245.689;VDB=0.0546907;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.6:17057473 chr06:017057473 0 W/17057473-17057473 FN723-S Single Base Substitution C-G INTRON HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1240-S.SNP.6:17058914 chr06:017058914 0 W/17058914-17058914 FN1240-S Single Base Substitution A-G INTRON HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4154-S.SNP.6:17062370 chr06:017062370 0 W/17062370-17062370 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.946052;DP=2515;DP4=1172,1258,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.26176e-05;MQSB=0.973685;RPB=0.360488;SGB=17.6652;VDB=0.766656;EFF=INTRON(MODIFIER||||539|LOC_Os06g29710|protein_coding|CODING|LOC_Os06g29710.1|3|1) FN990-S.SNP.6:17063418 chr06:017063418 0 W/17063418-17063418 FN990-S Single Base Substitution A-G INTRON HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2614-S.SNP.6:17069743 chr06:017069743 0 W/17069743-17069743 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.791636;DP=3837;DP4=1941,1621,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.23097e-07;MQSB=0.186758;RPB=0.267975;SGB=24.1541;VDB=0.888409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.6:17078245 chr06:017078245 0 W/17078245-17078245 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.935878;DP=2919;DP4=1446,1362,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.25185e-09;MQSB=0.893591;RPB=0.946883;SGB=65.4653;VDB=0.581648;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C162Y|451|LOC_Os06g29740|protein_coding|CODING|LOC_Os06g29740.1|1|1) FN3663-S.SNP.6:17078529 chr06:017078529 0 W/17078529-17078529 FN3663-S SNP G -> A AC=1;AN=190;BQB=0.736262;DP=2994;DP4=1422,1489,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.34538e-06;MQSB=0.95423;RPB=0.947035;SGB=32.5467;VDB=0.896381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D257N|451|LOC_Os06g29740|protein_coding|CODING|LOC_Os06g29740.1|1|1) FN778-S.SNP.6:17083918 chr06:017083918 0 W/17083918-17083918 FN778-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1493-S.SNP.6:17094049 chr06:017094049 0 W/17094049-17094049 FN1493-S Single Base Substitution A-G INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2108-S.SNP.6:17101193 chr06:017101193 0 W/17101193-17101193 FN2108-S SNP G -> T AC=1;AN=168;BQB=0.480895;DP=3745;DP4=2100,1595,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87869e-05;MQSB=0.978197;RPB=0.867431;SGB=17.3231;VDB=0.81207;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.6:17115600 chr06:017115600 0 W/17115600-17115600 FN786-S Single Base Substitution T-C INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3819-S.SNP.6:17124079 chr06:017124079 0 W/17124079-17124079 FN3819-S SNP C -> G AC=1;AN=190;BQB=0.962418;DP=2508;DP4=1216,1222,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000302842;MQSB=0.88518;RPB=0.769964;SGB=30.8803;VDB=0.995963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.6:17129451 chr06:017129451 0 W/17129451-17129451 FN1114-S Single Base Substitution A-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1176-S.SNP.6:17139571 chr06:017139571 0 W/17139571-17139571 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3339-S.SNP.6:17144914 chr06:017144914 0 W/17144914-17144914 FN3339-S SNP A -> G AC=1;AN=184;BQB=0.864284;DP=3043;DP4=1699,1231,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93622e-05;MQSB=1.53865e-10;RPB=0.911052;SGB=48.7425;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.6:17145654 chr06:017145654 0 W/17145654-17145654 FN3325-S SNP C -> T AC=1;AN=184;BQB=0.996251;DP=3237;DP4=1682,1437,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25359e-07;MQSB=0.850425;RPB=0.926594;SGB=35.7479;VDB=0.257832;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.6:17151530 chr06:017151530 0 W/17151530-17151530 FN-102 Single Base Substitution C-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1639-S.SNP.6:17153314 chr06:017153314 0 W/17153314-17153314 FN1639-S Single Base Substitution G-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3388-S.SNP.6:17170171 chr06:017170171 0 W/17170171-17170171 FN3388-S SNP T -> A AC=1;AN=184;BQB=0.994739;DP=3913;DP4=1492,2107,17,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21503e-11;MQSB=0.6546;RPB=0.624958;SGB=78.0093;VDB=0.156162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.6:17180025 chr06:017180025 0 W/17180025-17180025 FN3800-S SNP T -> A AC=2;AN=190;BQB=0.709353;DP=2559;DP4=1208,1214,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.48507e-15;MQSB=0.711021;RPB=0.949609;SGB=103.624;VDB=0.0560752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.6:17182333 chr06:017182333 0 W/17182333-17182333 FN3994-S SNP A -> G AC=2;AN=168;BQB=0.927767;DP=3047;DP4=1555,1312,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.65145e-12;MQSB=0.970582;RPB=0.768021;SGB=34.3388;VDB=0.847724;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.6:17183083 chr06:017183083 0 W/17183083-17183083 FN628-S Single Base Substitution A-C INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-172.SNP.6:17184497 chr06:017184497 0 W/17184497-17184497 FN-172 Single Base Substitution T-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1278-S.SNP.6:17185842 chr06:017185842 0 W/17185842-17185842 FN1278-S Single Base Substitution C-G INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1458-S.SNP.6:17186426 chr06:017186426 0 W/17186426-17186426 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2436.SNP.6:17186426 chr06:017186426 0 W/17186426-17186426 FN2436 SNP G -> A AC=2;AN=200;BQB=0.890084;DP=4548;DP4=2212,2090,30,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.1085e-29;MQSB=0.980658;RPB=0.69031;SGB=243.077;VDB=0.479755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.6:17186426 chr06:017186426 0 W/17186426-17186426 FN3869-S SNP G -> A AC=2;AN=158;BQB=0.744939;DP=2971;DP4=1372,1471,19,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.32929e-21;MQSB=0.980065;RPB=0.994914;SGB=73.5771;VDB=0.151816;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.6:17186426 chr06:017186426 0 W/17186426-17186426 FN389-S Single Base Substitution G-A INTERGENIC HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1039-S.SNP.6:17189636 chr06:017189636 0 W/17189636-17189636 FN1039-S Single Base Substitution T-A INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN545-S.SNP.6:17192246 chr06:017192246 0 W/17192246-17192246 FN545-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g29830 expressed protein SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN2765-S.SNP.6:17192406 chr06:017192406 0 W/17192406-17192406 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.665511;DP=3753;DP4=1547,1986,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.35693e-13;MQSB=0.911086;RPB=0.860238;SGB=72.5051;VDB=0.167325;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V279|335|LOC_Os06g29830|protein_coding|CODING|LOC_Os06g29830.1|2|1) FN-247.SNP.6:17193382 chr06:017193382 0 W/17193382-17193382 FN-247 Single Base Substitution G-A INTERGENIC HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1307-S.SNP.6:17195466 chr06:017195466 0 W/17195466-17195466 FN1307-S Single Base Substitution C-T INTRON HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN804-S.SNP.6:17198706 chr06:017198706 0 W/17198706-17198706 FN804-S Single Base Substitution A-C INTRON HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2447.SNP.6:17198894 chr06:017198894 0 W/17198894-17198894 FN2447 SNP C -> A AC=1;AN=200;BQB=0.99222;DP=3926;DP4=1384,2237,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52879e-08;MQSB=0.218892;RPB=0.874401;SGB=29.4849;VDB=0.962512;EFF=INTRON(MODIFIER||||490|LOC_Os06g29844|protein_coding|CODING|LOC_Os06g29844.1|5|1) FN-213.SNP.6:17200694 chr06:017200694 0 W/17200694-17200694 FN-213 Single Base Substitution A-G INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN-88.SNP.6:17200694 chr06:017200694 0 W/17200694-17200694 FN-88 Single Base Substitution A-G INTERGENIC HOMO SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN3800-S.SNP.6:17200694 chr06:017200694 0 W/17200694-17200694 FN3800-S SNP A -> G AC=2;AN=190;BQB=0.460483;DP=2710;DP4=1374,1196,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.20746e-11;MQSB=0.996837;RPB=0.330928;SGB=19.6499;VDB=0.86409;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.6:17200694 chr06:017200694 0 W/17200694-17200694 FN_546-3-1 Single Base Substitution A-G HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. W23-2-1.SNP.6:17200694 chr06:017200694 0 W/17200694-17200694 W23-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN3955-S.SNP.6:17209081 chr06:017209081 0 W/17209081-17209081 FN3955-S SNP T -> A AC=1;AN=168;BQB=0.883313;DP=2775;DP4=1045,1559,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.08651e-08;MQSB=0.034012;RPB=0.851265;SGB=51.902;VDB=0.766256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.6:17215702 chr06:017215702 0 W/17215702-17215702 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.975824;DP=2757;DP4=1346,1331,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.17474e-08;MQSB=0.905774;RPB=0.923413;SGB=39.6545;VDB=0.874637;EFF=INTRON(MODIFIER||||232|LOC_Os06g29890|protein_coding|CODING|LOC_Os06g29890.1|3|1) FN1483-S.SNP.6:17217859 chr06:017217859 0 W/17217859-17217859 FN1483-S Single Base Substitution A-G INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1633-S.SNP.6:17219009 chr06:017219009 0 W/17219009-17219009 FN1633-S Single Base Substitution C-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1633-S.SNP.6:17219010 chr06:017219010 0 W/17219010-17219010 FN1633-S Single Base Substitution T-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1633-S.SNP.6:17219011 chr06:017219011 0 W/17219011-17219011 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN972-S.SNP.6:17221148 chr06:017221148 0 W/17221148-17221148 FN972-S Single Base Substitution G-A INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2628-S.SNP.6:17222179 chr06:017222179 0 W/17222179-17222179 FN2628-S SNP A -> T AC=1;AN=200;BQB=0.992362;DP=5021;DP4=2264,2552,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199164;MQB=1.09047e-16;MQSB=0.947698;RPB=0.990393;SGB=60.747;VDB=0.311044;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.6:17232525 chr06:017232525 0 W/17232525-17232525 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3561-S.SNP.6:17232684 chr06:017232684 0 W/17232684-17232684 FN3561-S SNP G -> T AC=1;AN=188;BQB=0.986504;DP=2978;DP4=1313,1581,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75463e-15;MQSB=0.987792;RPB=0.182199;SGB=112.585;VDB=0.7321;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R221I|652|LOC_Os06g29920|protein_coding|CODING|LOC_Os06g29920.1|2|1) FN2696-S.SNP.6:17232918 chr06:017232918 0 W/17232918-17232918 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.948402;DP=4619;DP4=2220,2160,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70983e-15;MQSB=0.84831;RPB=0.975434;SGB=76.3213;VDB=0.86439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A299D|652|LOC_Os06g29920|protein_coding|CODING|LOC_Os06g29920.1|2|1) FN2628-S.SNP.6:17240615 chr06:017240615 0 W/17240615-17240615 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.816171;DP=4688;DP4=2172,2258,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.62669e-11;MQSB=0.905225;RPB=0.991753;SGB=81.8956;VDB=0.352621;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.6:17240956 chr06:017240956 0 W/17240956-17240956 FN2701-S SNP C -> T AC=2;AN=200;BQB=0.907429;DP=4744;DP4=2311,2125,6,8;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.04767e-05;MQSB=0.57487;RPB=0.956851;SGB=40.2696;VDB=0.914864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E92K|123|LOC_Os06g29940|protein_coding|CODING|LOC_Os06g29940.1|1|1) FN2464.SNP.6:17244743 chr06:017244743 0 W/17244743-17244743 FN2464 SNP G -> A AC=1;AN=200;BQB=0.829386;DP=4486;DP4=2254,1993,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.70566e-11;MQSB=0.900243;RPB=0.851197;SGB=72.6852;VDB=0.418533;EFF=INTRON(MODIFIER||||495|LOC_Os06g29950|protein_coding|CODING|LOC_Os06g29950.1|4|1) FN2254-S.SNP.6:17245861 chr06:017245861 0 W/17245861-17245861 FN2254-S SNP T -> G AC=1;AN=190;BQB=0.743756;DP=4538;DP4=1914,2229,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.59199e-08;MQSB=0.916106;RPB=0.82543;SGB=60.9777;VDB=0.889871;EFF=INTRON(MODIFIER||||495|LOC_Os06g29950|protein_coding|CODING|LOC_Os06g29950.1|6|1) FN2444.SNP.6:17247789 chr06:017247789 0 W/17247789-17247789 FN2444 SNP T -> C AC=1;AN=200;BQB=0.880519;DP=5137;DP4=2542,2246,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.58048e-10;MQSB=0.886765;RPB=0.815173;SGB=43.8747;VDB=0.40099;EFF=UTR_3_PRIME(MODIFIER||16||495|LOC_Os06g29950|protein_coding|CODING|LOC_Os06g29950.1|10|1) FN743-S.SNP.6:17252100 chr06:017252100 0 W/17252100-17252100 FN743-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2749-S.SNP.6:17253975 chr06:017253975 0 W/17253975-17253975 FN2749-S SNP C -> G AC=1;AN=200;BQB=0.772791;DP=3615;DP4=1928,1401,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000302825;MQSB=0.760009;RPB=0.166385;SGB=11.2488;VDB=0.0766355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.6:17258164 chr06:017258164 0 W/17258164-17258164 FN3438-S SNP C -> A AC=1;AN=184;BQB=0.959156;DP=2498;DP4=1098,1322,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.42427e-05;MQSB=0.628059;RPB=0.542678;SGB=35.1773;VDB=0.429958;EFF=INTRON(MODIFIER||||479|LOC_Os06g29994|protein_coding|CODING|LOC_Os06g29994.1|1|1) FN2629-S.SNP.6:17263254 chr06:017263254 0 W/17263254-17263254 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.876075;DP=4935;DP4=2063,2588,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62727e-13;MQSB=0.943897;RPB=0.403697;SGB=87.1368;VDB=0.262741;EFF=INTRON(MODIFIER||||479|LOC_Os06g29994|protein_coding|CODING|LOC_Os06g29994.1|1|1) FN2485.SNP.6:17263294 chr06:017263294 0 W/17263294-17263294 FN2485 SNP T -> A AC=1;AN=200;BQB=0.927764;DP=4525;DP4=1732,2459,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11187e-12;MQSB=0.565591;RPB=0.710789;SGB=76.3213;VDB=0.174583;EFF=INTRON(MODIFIER||||479|LOC_Os06g29994|protein_coding|CODING|LOC_Os06g29994.1|1|1) FN776-S.SNP.6:17266931 chr06:017266931 0 W/17266931-17266931 FN776-S Single Base Substitution A-G INTRON HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1576-S.SNP.6:17270234 chr06:017270234 0 W/17270234-17270234 FN1576-S Single Base Substitution T-C INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN881-S.SNP.6:17270444 chr06:017270444 0 W/17270444-17270444 FN881-S Single Base Substitution A-T INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1735-S.SNP.6:17279524 chr06:017279524 0 W/17279524-17279524 FN1735-S SNP A -> C AC=1;AN=188;BQB=0.967953;DP=2850;DP4=1246,1556,13,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.49901e-17;MQSB=0.890941;RPB=0.286089;SGB=99.7635;VDB=0.543272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E428A|542|LOC_Os06g30020|protein_coding|CODING|LOC_Os06g30020.1|9|1) FN1622-S.SNP.6:17280587 chr06:017280587 0 W/17280587-17280587 FN1622-S Single Base Substitution T-A INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2684-S.SNP.6:17282586 chr06:017282586 0 W/17282586-17282586 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.993387;DP=4941;DP4=2392,2285,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.36091e-10;MQSB=0.999995;RPB=0.885309;SGB=51.0851;VDB=0.144494;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-1.SNP.6:17285875 chr06:017285875 0 W/17285875-17285875 FN_398-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g30030 DUF617 domain containing protein, expressed SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN3540-S.SNP.6:17296289 chr06:017296289 0 W/17296289-17296289 FN3540-S SNP T -> A AC=2;AN=188;BQB=0.999788;DP=2459;DP4=1294,1073,17,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.97669e-15;MQSB=0.990516;RPB=0.351973;SGB=121.672;VDB=0.531883;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.6:17296728 chr06:017296728 0 W/17296728-17296728 FN474-S Single Base Substitution A-G INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2497.SNP.6:17302325 chr06:017302325 0 W/17302325-17302325 FN2497 SNP G -> A AC=1;AN=200;BQB=0.0126568;DP=4081;DP4=2222,1619,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96665e-07;MQSB=0.761029;RPB=0.991436;SGB=51.0851;VDB=0.93597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E416K|730|LOC_Os06g30040|protein_coding|CODING|LOC_Os06g30040.1|5|1) FN2251-S.SNP.6:17303660 chr06:017303660 0 W/17303660-17303660 FN2251-S SNP T -> A AC=1;AN=190;BQB=0.925305;DP=4632;DP4=2327,1991,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07501e-07;MQSB=0.66242;RPB=0.92501;SGB=32.5467;VDB=0.304789;EFF=INTRON(MODIFIER||||730|LOC_Os06g30040|protein_coding|CODING|LOC_Os06g30040.1|7|1) FN1519-S.SNP.6:17306818 chr06:017306818 0 W/17306818-17306818 FN1519-S Single Base Substitution A-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN522-S.SNP.6:17308617 chr06:017308617 0 W/17308617-17308617 FN522-S Single Base Substitution G-A INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3567-S.SNP.6:17312971 chr06:017312971 0 W/17312971-17312971 FN3567-S SNP T -> G AC=1;AN=188;BQB=0.849843;DP=2519;DP4=1264,1193,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87019e-10;MQSB=0.963731;RPB=0.517339;SGB=67.1521;VDB=0.435229;EFF=INTRON(MODIFIER||||690|LOC_Os06g30060|protein_coding|CODING|LOC_Os06g30060.1|1|1),INTRON(MODIFIER||||667|LOC_Os06g30060|protein_coding|CODING|LOC_Os06g30060.2|1|1) FN3292-S.SNP.6:17323276 chr06:017323276 0 W/17323276-17323276 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.923401;DP=2940;DP4=1369,1438,1,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17938e-06;MQSB=0.973964;RPB=0.497579;SGB=39.699;VDB=0.260934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.6:17328008 chr06:017328008 0 W/17328008-17328008 FN1320-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g30070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN4109-S.SNP.6:17332598 chr06:017332598 0 W/17332598-17332598 FN4109-S SNP A -> T AC=1;AN=182;BQB=0.999249;DP=3013;DP4=1481,1430,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.82653e-09;MQSB=0.997033;RPB=0.953058;SGB=42.6494;VDB=0.905115;EFF=INTRON(MODIFIER||||911|LOC_Os06g30080|protein_coding|CODING|LOC_Os06g30080.1|5|1) FN744-S.SNP.6:17332604 chr06:017332604 0 W/17332604-17332604 FN744-S Single Base Substitution G-A INTRON HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4109-S.SNP.6:17332610 chr06:017332610 0 W/17332610-17332610 FN4109-S SNP G -> T AC=1;AN=182;BQB=0.975395;DP=2927;DP4=1472,1375,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.20703e-10;MQSB=1;RPB=0.827225;SGB=62.1548;VDB=0.940861;EFF=INTRON(MODIFIER||||911|LOC_Os06g30080|protein_coding|CODING|LOC_Os06g30080.1|5|1) FN3626-S.SNP.6:17335295 chr06:017335295 0 W/17335295-17335295 FN3626-S SNP A -> C AC=2;AN=190;BQB=0.883106;DP=3038;DP4=1207,1542,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.50861e-16;MQSB=0.549156;RPB=0.895876;SGB=54.3062;VDB=0.224276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.6:17335323 chr06:017335323 0 W/17335323-17335323 FN2160-S SNP C -> T AC=2;AN=168;BQB=0.202633;DP=2235;DP4=1352,817,10,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.8293e-07;MQSB=0.665318;RPB=0.967152;SGB=-15.8033;VDB=0.754643;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.6:17338424 chr06:017338424 0 W/17338424-17338424 FN1461-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2105-S.SNP.6:17348645 chr06:017348645 0 W/17348645-17348645 FN2105-S SNP G -> T AC=2;AN=168;BQB=0.830778;DP=3613;DP4=1490,2055,22,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.29119e-21;MQSB=0.925313;RPB=0.95217;SGB=-4.6021;VDB=0.0748402;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.6:17358781 chr06:017358781 0 W/17358781-17358781 FN758-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g30110 retrotransposon protein, putative, unclassified, expressed SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN3445-S.SNP.6:17359155 chr06:017359155 0 W/17359155-17359155 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.997312;DP=3219;DP4=1627,1525,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69091e-05;MQSB=0.965066;RPB=0.985625;SGB=39.699;VDB=0.324775;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V621|1179|LOC_Os06g30110|protein_coding|CODING|LOC_Os06g30110.1|4|1) FN1759-S.SNP.6:17363233 chr06:017363233 0 W/17363233-17363233 FN1759-S SNP G -> T AC=1;AN=188;BQB=0.199319;DP=3578;DP4=1751,1798,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.86461e-07;MQSB=0.91728;RPB=0.904425;SGB=-81.5271;VDB=0.205703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1016-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN1016-S Single Base Substitution G-A INTERGENIC HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1535-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN1535-S Single Base Substitution G-A INTERGENIC Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1735-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN1735-S SNP G -> A AC=2;AN=188;BQB=0.992264;DP=2703;DP4=1591,1059,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.41458e-20;MQSB=0.871997;RPB=0.883253;SGB=36.4041;VDB=0.533576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.77053;DP=4974;DP4=2589,2037,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.32334e-10;MQSB=0.614588;RPB=0.953028;SGB=26.2136;VDB=0.284079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN2689-S SNP G -> A AC=2;AN=200;BQB=0.998821;DP=5131;DP4=2542,2309,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.78748e-28;MQSB=0.977626;RPB=0.998454;SGB=52.8295;VDB=0.085166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN3515-S SNP G -> A AC=2;AN=188;BQB=0.897866;DP=3241;DP4=1556,1599,9,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.6589e-19;MQSB=0.897309;RPB=0.715922;SGB=66.7689;VDB=0.425171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN3794-S SNP G -> A AC=1;AN=190;BQB=0.922893;DP=3272;DP4=1577,1591,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55665e-10;MQSB=0.986788;RPB=0.500003;SGB=53.8699;VDB=0.581528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.468713;DP=2725;DP4=1351,1288,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.45027e-07;MQSB=0.99986;RPB=0.920484;SGB=47.5512;VDB=0.5602;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN4110-S SNP G -> A AC=2;AN=182;BQB=0.996374;DP=3332;DP4=1690,1540,23,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.79559e-26;MQSB=0.995692;RPB=0.762178;SGB=137.443;VDB=0.790024;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. W360-2S-2.SNP.6:17364138 chr06:017364138 0 W/17364138-17364138 W360-2S-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN-200.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN-200 Single Base Substitution G-A INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-206.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN-206 Single Base Substitution G-A INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-278.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN-278 Single Base Substitution G-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-309.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN-309 Single Base Substitution G-A INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-350.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN-350 Single Base Substitution G-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1058-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN1058-S Single Base Substitution G-A INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1121-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2469.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN2469 SNP G -> A AC=2;AN=200;BQB=0.422317;DP=4586;DP4=2083,2169,26,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000218055;MQB=3.86607e-21;MQSB=0.591264;RPB=0.184543;SGB=155.635;VDB=0.427981;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN2724-S SNP G -> A AC=2;AN=200;BQB=0.440377;DP=4898;DP4=2322,2299,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.92574e-17;MQSB=0.809045;RPB=0.604643;SGB=73.7728;VDB=0.688089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN3478-S SNP G -> A AC=1;AN=184;BQB=0.907682;DP=3004;DP4=1487,1437,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96723e-08;MQSB=0.833829;RPB=0.0750822;SGB=71.3514;VDB=0.292285;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN4134-S SNP G -> A AC=2;AN=182;BQB=0.992903;DP=3031;DP4=1544,1408,16,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000329924;MQB=4.36734e-17;MQSB=0.255943;RPB=0.375731;SGB=129.818;VDB=0.103988;EFF=INTERGENIC(MODIFIER||||||||||1) FN4154-S.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 FN4154-S SNP G -> A AC=1;AN=170;BQB=0.955697;DP=2402;DP4=1169,1178,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.15212e-06;MQSB=0.976741;RPB=0.963455;SGB=24.5502;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.6:17364850 chr06:017364850 0 W/17364850-17364850 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN950-S.SNP.6:17367756 chr06:017367756 0 W/17367756-17367756 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2583-S.SNP.6:17376354 chr06:017376354 0 W/17376354-17376354 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.769127;DP=5115;DP4=2415,2456,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66145e-10;MQSB=0.973102;RPB=0.968902;SGB=9.48993;VDB=0.506425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.6:17385584 chr06:017385584 0 W/17385584-17385584 FN1080-S Single Base Substitution T-A INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN551-S.SNP.6:17389966 chr06:017389966 0 W/17389966-17389966 FN551-S Single Base Substitution G-T INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN1763-S.SNP.6:17397551 chr06:017397551 0 W/17397551-17397551 FN1763-S SNP G -> T AC=2;AN=188;BQB=0.960729;DP=1919;DP4=1076,767,12,7;HOB=0.0210502;ICB=0.494738;MQ=31;MQ0F=0.116727;MQB=0.960612;MQSB=0;RPB=0.853064;SGB=57.244;VDB=0.409481;EFF=INTRON(MODIFIER||||270|LOC_Os06g30150|protein_coding|CODING|LOC_Os06g30150.1|1|1) FN3820-S.SNP.6:17398229 chr06:017398229 0 W/17398229-17398229 FN3820-S SNP T -> A AC=1;AN=190;BQB=0.974381;DP=3021;DP4=1393,1514,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000662032;MQB=4.8397e-07;MQSB=0.990642;RPB=0.770905;SGB=62.7569;VDB=0.0582993;EFF=INTRON(MODIFIER||||270|LOC_Os06g30150|protein_coding|CODING|LOC_Os06g30150.1|1|1) FN3439-S.SNP.6:17401785 chr06:017401785 0 W/17401785-17401785 FN3439-S SNP G -> A AC=1;AN=184;BQB=0.960618;DP=2973;DP4=1455,1446,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.18986e-08;MQSB=0.92648;RPB=0.579842;SGB=35.7479;VDB=0.230819;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.6:17405002 chr06:017405002 0 W/17405002-17405002 FN3465-S SNP C -> A AC=1;AN=184;BQB=0.969278;DP=3355;DP4=1790,1483,15,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.81792e-15;MQSB=0.743646;RPB=0.284528;SGB=112.047;VDB=0.900066;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.6:17407477 chr06:017407477 0 W/17407477-17407477 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.668195;DP=2591;DP4=1230,1286,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000211039;MQSB=0.975183;RPB=0.954224;SGB=5.62295;VDB=0.630851;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.6:17412296 chr06:017412296 0 W/17412296-17412296 705-6 Single Base Substitution A-G INTRON Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1486-S.SNP.6:17416268 chr06:017416268 0 W/17416268-17416268 FN1486-S Single Base Substitution G-A INTRON Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN654-S.SNP.6:17418564 chr06:017418564 0 W/17418564-17418564 FN654-S Single Base Substitution T-C INTRON HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1270-S.SNP.6:17419281 chr06:017419281 0 W/17419281-17419281 FN1270-S Single Base Substitution G-A INTRON HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3903-S.SNP.6:17422371 chr06:017422371 0 W/17422371-17422371 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.99532;DP=2822;DP4=1432,1276,15,14;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0163005;MQB=0.0188644;MQSB=0.707229;RPB=0.362172;SGB=87.9846;VDB=0.0815847;EFF=INTRON(MODIFIER||||524|LOC_Os06g30179|protein_coding|CODING|LOC_Os06g30179.1|2|1) FN2572-S.SNP.6:17423049 chr06:017423049 0 W/17423049-17423049 FN2572-S SNP T -> C AC=2;AN=198;BQB=0.0263092;DP=3920;DP4=1761,1763,35,20;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00382653;MQB=1.7258e-25;MQSB=0.0318154;RPB=0.900983;SGB=209.476;VDB=0.791169;EFF=INTRON(MODIFIER||||524|LOC_Os06g30179|protein_coding|CODING|LOC_Os06g30179.1|2|1) FN2572-S.SNP.6:17423049 chr06:017423049 0 W/17423049-17423049 FN2572-S Single Base Substitution T-C INTRON HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN744-S.SNP.6:17424742 chr06:017424742 0 W/17424742-17424742 FN744-S Single Base Substitution C-A INTRON HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2562-S.SNP.6:17426312 chr06:017426312 0 W/17426312-17426312 FN2562-S SNP C -> G AC=1;AN=198;BQB=0.936752;DP=4014;DP4=1785,1956,25,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.45246e-18;MQSB=0.125233;RPB=0.932098;SGB=83.8419;VDB=0.547828;EFF=INTRON(MODIFIER||||524|LOC_Os06g30179|protein_coding|CODING|LOC_Os06g30179.1|2|1) FN819-S.SNP.6:17434405 chr06:017434405 0 W/17434405-17434405 FN819-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g30210 expressed protein SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2434.SNP.6:17436543 chr06:017436543 0 W/17436543-17436543 FN2434 SNP T -> A AC=1;AN=200;BQB=0.796638;DP=5153;DP4=2426,2548,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39922e-09;MQSB=0.989574;RPB=0.997589;SGB=24.2746;VDB=0.754234;EFF=INTRON(MODIFIER||||430|LOC_Os06g30210|protein_coding|CODING|LOC_Os06g30210.1|2|1) FN1410-S.SNP.6:17440556 chr06:017440556 0 W/17440556-17440556 FN1410-S Single Base Substitution G-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN3393-S.SNP.6:17441917 chr06:017441917 0 W/17441917-17441917 FN3393-S SNP C -> A AC=1;AN=184;BQB=0.909323;DP=2935;DP4=1555,1279,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000340716;MQB=1.07695e-06;MQSB=0.972119;RPB=0.981093;SGB=48.7425;VDB=0.720427;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.6:17447440 chr06:017447440 0 W/17447440-17447440 FN1212-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1061-S.SNP.6:17448486 chr06:017448486 0 W/17448486-17448486 FN1061-S Single Base Substitution G-T INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. W577-3-1.SNP.6:17453940 chr06:017453940 0 W/17453940-17453940 W577-3-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3794-S.SNP.6:17459352 chr06:017459352 0 W/17459352-17459352 FN3794-S SNP A -> G AC=1;AN=190;BQB=0.620522;DP=2489;DP4=1180,1228,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000781785;MQSB=0.659007;RPB=0.998603;SGB=35.4339;VDB=0.956416;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.6:17464669 chr06:017464669 0 W/17464669-17464669 FN579-S Single Base Substitution G-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN962-S.SNP.6:17470260 chr06:017470260 0 W/17470260-17470260 FN962-S Single Base Substitution G-T INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3326-S.SNP.6:17487534 chr06:017487534 0 W/17487534-17487534 FN3326-S SNP G -> A AC=1;AN=184;BQB=0.910912;DP=2851;DP4=1552,1163,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27052e-12;MQSB=0.832832;RPB=0.328174;SGB=11.3677;VDB=0.583777;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.6:17487888 chr06:017487888 0 W/17487888-17487888 FN1376-S Single Base Substitution G-T INTRON HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2656-S.SNP.6:17500502 chr06:017500502 0 W/17500502-17500502 FN2656-S SNP A -> T AC=1;AN=200;BQB=0.99998;DP=5095;DP4=2386,2469,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196271;MQB=1.43482e-19;MQSB=0.976765;RPB=0.899093;SGB=101.557;VDB=0.682147;EFF=INTRON(MODIFIER||||1425|LOC_Os06g30310|protein_coding|CODING|LOC_Os06g30310.1|32|1) FN516-S.SNP.6:17519860 chr06:017519860 0 W/17519860-17519860 FN516-S Single Base Substitution G-A INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN_807-3-1.SNP.6:17521093 chr06:017521093 0 W/17521093-17521093 FN_807-3-1 Single Base Substitution G-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN566-S.SNP.6:17528805 chr06:017528805 0 W/17528805-17528805 FN566-S Single Base Substitution A-G INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1734-S.SNP.6:17540443 chr06:017540443 0 W/17540443-17540443 FN1734-S SNP A -> T AC=1;AN=188;BQB=0.0438149;DP=2642;DP4=1636,973,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000709155;MQSB=0.624794;RPB=0.330368;SGB=-104.065;VDB=0.976309;EFF=INTRON(MODIFIER||||176|LOC_Os06g30370|protein_coding|CODING|LOC_Os06g30370.1|3|1) FN2536-S.SNP.6:17541483 chr06:017541483 0 W/17541483-17541483 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.963185;DP=4285;DP4=2123,1943,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.2e-07;MQSB=0.937994;RPB=0.999785;SGB=40.3588;VDB=0.439806;EFF=INTRON(MODIFIER||||176|LOC_Os06g30370|protein_coding|CODING|LOC_Os06g30370.1|3|1) FN4117-S.SNP.6:17541483 chr06:017541483 0 W/17541483-17541483 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.767443;DP=2853;DP4=1444,1322,14,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.21424e-14;MQSB=0.924522;RPB=0.741441;SGB=116.285;VDB=0.420716;EFF=INTRON(MODIFIER||||176|LOC_Os06g30370|protein_coding|CODING|LOC_Os06g30370.1|3|1) FN664-S.SNP.6:17541483 chr06:017541483 0 W/17541483-17541483 FN664-S Single Base Substitution C-T INTRON HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN2190-S.SNP.6:17544636 chr06:017544636 0 W/17544636-17544636 FN2190-S SNP A -> T AC=1;AN=190;BQB=0.865772;DP=4975;DP4=2402,2273,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55915e-15;MQSB=0.960713;RPB=0.85644;SGB=25.8654;VDB=0.684293;EFF=INTERGENIC(MODIFIER||||||||||1) FN3533-S.SNP.6:17548656 chr06:017548656 0 W/17548656-17548656 FN3533-S SNP G -> T AC=1;AN=188;BQB=0.9767;DP=2646;DP4=1347,1243,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38459e-05;MQSB=0.99941;RPB=0.940267;SGB=18.2682;VDB=0.385012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.6:17549460 chr06:017549460 0 W/17549460-17549460 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.884619;DP=2003;DP4=992,951,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.65687e-07;MQSB=0.969841;RPB=0.999895;SGB=43.3113;VDB=0.399878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.6:17552267 chr06:017552267 0 W/17552267-17552267 FN1606-S Single Base Substitution G-T INTRON Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3985-S.SNP.6:17554414 chr06:017554414 0 W/17554414-17554414 FN3985-S SNP C -> T AC=1;AN=168;BQB=0.775787;DP=2639;DP4=1252,1280,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83101e-12;MQSB=0.944032;RPB=0.501258;SGB=92.0501;VDB=0.724156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.6:17555455 chr06:017555455 0 W/17555455-17555455 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.920803;DP=2952;DP4=1327,1458,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.24881e-08;MQSB=0.639973;RPB=0.747286;SGB=23.2751;VDB=0.933186;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.6:17559798 chr06:017559798 0 W/17559798-17559798 FN1633-S Single Base Substitution A-G INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3693-S.SNP.6:17567451 chr06:017567451 0 W/17567451-17567451 FN3693-S SNP A -> T AC=2;AN=190;BQB=0.975483;DP=3042;DP4=1390,1515,6,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.49878e-11;MQSB=0.981132;RPB=0.948572;SGB=90.0802;VDB=0.747629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.6:17570819 chr06:017570819 0 W/17570819-17570819 FN2172-S SNP C -> A AC=1;AN=168;BQB=0.248949;DP=4194;DP4=2068,2032,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05333e-11;MQSB=0.957135;RPB=0.48612;SGB=14.2064;VDB=0.441418;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.6:17573669 chr06:017573669 0 W/17573669-17573669 FN4155-S SNP A -> G AC=1;AN=170;BQB=0.530365;DP=2556;DP4=1195,1295,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.54747e-06;MQSB=0.991105;RPB=0.981152;SGB=34.878;VDB=0.604715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.6:17574482 chr06:017574482 0 W/17574482-17574482 FN3457-S SNP C -> G AC=2;AN=184;BQB=0.785163;DP=2808;DP4=1371,1348,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.36782e-07;MQSB=0.999929;RPB=0.945627;SGB=62.3078;VDB=0.0454163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.6:17578178 chr06:017578178 0 W/17578178-17578178 FN3710-S SNP G -> C AC=1;AN=190;BQB=0.978094;DP=2455;DP4=1153,1182,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0013924;MQSB=0.497746;RPB=0.62382;SGB=26.3271;VDB=0.259914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L250V|642|LOC_Os06g30420|protein_coding|CODING|LOC_Os06g30420.1|1|1) FN1106-S.SNP.6:17579168 chr06:017579168 0 W/17579168-17579168 FN1106-S Single Base Substitution C-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3437-S.SNP.6:17579194 chr06:017579194 0 W/17579194-17579194 FN3437-S SNP A -> T AC=1;AN=184;BQB=0.804544;DP=2753;DP4=1441,1168,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000100478;MQSB=0.537923;RPB=0.372138;SGB=8.14452;VDB=0.249799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.6:17582160 chr06:017582160 0 W/17582160-17582160 FN2291 SNP T -> C AC=1;AN=192;BQB=0.987441;DP=5064;DP4=2456,2268,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.07931e-23;MQSB=0.999374;RPB=0.487635;SGB=-44.9121;VDB=0.468037;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.6:17591133 chr06:017591133 0 W/17591133-17591133 FN1113-S Single Base Substitution G-A INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2611-S.SNP.6:17593397 chr06:017593397 0 W/17593397-17593397 FN2611-S SNP T -> A AC=1;AN=200;BQB=0.228845;DP=3815;DP4=2326,1052,21,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.0733e-14;MQSB=0.454706;RPB=0.992825;SGB=94.3471;VDB=0.104327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L6H|125|LOC_Os06g30450|protein_coding|CODING|LOC_Os06g30450.1|1|1) FN3752-S.SNP.6:17598674 chr06:017598674 0 W/17598674-17598674 FN3752-S SNP G -> A AC=2;AN=190;BQB=0.902735;DP=2243;DP4=1206,965,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.70573e-11;MQSB=0.978498;RPB=0.242954;SGB=80.9724;VDB=0.0393777;EFF=INTRON(MODIFIER||||488|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.1|19|1),INTRON(MODIFIER||||484|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.2|19|1),INTRON(MODIFIER||||448|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.3|17|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.4|17|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.5|18|1) FN3363-S.SNP.6:17600201 chr06:017600201 0 W/17600201-17600201 FN3363-S SNP G -> T AC=1;AN=184;BQB=0.978167;DP=2497;DP4=1210,1211,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55511e-08;MQSB=0.999486;RPB=0.760724;SGB=35.7479;VDB=0.929366;EFF=INTRON(MODIFIER||||488|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.1|13|1),INTRON(MODIFIER||||484|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.2|13|1),INTRON(MODIFIER||||448|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.3|11|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.4|11|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.5|12|1) FN3471-S.SNP.6:17603546 chr06:017603546 0 W/17603546-17603546 FN3471-S SNP T -> C AC=2;AN=184;BQB=0.996184;DP=2637;DP4=1307,1224,19,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.00529e-17;MQSB=0.984042;RPB=0.936422;SGB=106.184;VDB=0.483043;EFF=INTRON(MODIFIER||||488|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.1|8|1),INTRON(MODIFIER||||484|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.2|8|1),INTRON(MODIFIER||||448|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.3|6|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.4|6|1),INTRON(MODIFIER||||441|LOC_Os06g30460|protein_coding|CODING|LOC_Os06g30460.5|7|1) FN921-S.SNP.6:17606301 chr06:017606301 0 W/17606301-17606301 FN921-S Single Base Substitution A-T INTRON HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN973-S.SNP.6:17618128 chr06:017618128 0 W/17618128-17618128 FN973-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g30480 expressed protein SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2470.SNP.6:17620675 chr06:017620675 0 W/17620675-17620675 FN2470 SNP T -> A AC=1;AN=200;BQB=0.832074;DP=3789;DP4=2134,1274,7,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.0594e-09;MQSB=0.278812;RPB=0.927315;SGB=12.7003;VDB=0.431453;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.6:17621071 chr06:017621071 0 W/17621071-17621071 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2118-S.SNP.6:17634657 chr06:017634657 0 W/17634657-17634657 FN2118-S SNP C -> T AC=1;AN=168;BQB=0.200995;DP=4180;DP4=2007,2098,20,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52303e-13;MQSB=0.962048;RPB=0.155641;SGB=-361.293;VDB=0.477922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.6:17639993 chr06:017639993 0 W/17639993-17639993 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.975766;DP=1985;DP4=1329,591,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000155892;MQSB=0.942715;RPB=0.999037;SGB=26.3271;VDB=0.856886;EFF=INTRON(MODIFIER||||1473|LOC_Os06g30510|protein_coding|CODING|LOC_Os06g30510.1|1|1) FN3650-S.SNP.6:17647371 chr06:017647371 0 W/17647371-17647371 FN3650-S SNP C -> T AC=2;AN=190;BQB=0.989449;DP=2520;DP4=1246,1144,24,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.53461e-20;MQSB=0.915723;RPB=0.99749;SGB=162.065;VDB=0.609287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.6:17648121 chr06:017648121 0 W/17648121-17648121 FN-147 Single Base Substitution C-A INTERGENIC HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2639-S.SNP.6:17649523 chr06:017649523 0 W/17649523-17649523 FN2639-S SNP T -> C AC=1;AN=200;BQB=0.922924;DP=5037;DP4=2716,2093,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74388e-10;MQSB=0.935732;RPB=0.21571;SGB=47.4799;VDB=0.840515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN-172 Single Base Substitution T-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1222-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1222-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1264-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1264-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1320-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1355-S Single Base Substitution T-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1506-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1506-S Single Base Substitution T-A INTERGENIC Homo SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1514-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN1514-S Single Base Substitution T-A INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2125-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN2125-S SNP T -> A AC=2;AN=168;BQB=0.708566;DP=3191;DP4=1915,1235,20,7;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.019743;MQB=0.000111609;MQSB=0.0157104;RPB=0.887746;SGB=51.3545;VDB=0.866521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN3375-S SNP T -> A AC=2;AN=184;BQB=0.877054;DP=3151;DP4=1543,1440,19,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00190416;MQB=7.71276e-16;MQSB=0.990977;RPB=0.876634;SGB=134.656;VDB=0.201841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN3853-S SNP T -> A AC=1;AN=158;BQB=0.680475;DP=2636;DP4=1400,1121,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00227618;MQB=1.772e-05;MQSB=0.715174;RPB=0.770666;SGB=33.9591;VDB=0.364077;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN4009-S SNP T -> A AC=1;AN=168;BQB=0.996927;DP=2770;DP4=1471,1199,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00216606;MQB=1.32097e-05;MQSB=0.254236;RPB=0.318722;SGB=31.3172;VDB=0.0662383;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN4181-S SNP T -> A AC=1;AN=170;BQB=0.972352;DP=2821;DP4=1504,1243,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00212691;MQB=4.15142e-06;MQSB=0.0383011;RPB=0.965482;SGB=24.5502;VDB=0.860346;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN508-S Single Base Substitution T-A INTERGENIC HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN887-S.SNP.6:17652576 chr06:017652576 0 W/17652576-17652576 FN887-S Single Base Substitution T-A INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2707-S.SNP.6:17655491 chr06:017655491 0 W/17655491-17655491 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.873895;DP=4931;DP4=2177,2497,5,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00973433;MQB=5.56502e-06;MQSB=1.211e-08;RPB=0.900218;SGB=29.4541;VDB=0.0512641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R775Q|1225|LOC_Os06g30520|protein_coding|CODING|LOC_Os06g30520.1|7|1) FN2292.SNP.6:17655537 chr06:017655537 0 W/17655537-17655537 FN2292 SNP G -> A AC=1;AN=192;BQB=0.80275;DP=4810;DP4=2115,2374,6,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0022869;MQB=8.58546e-14;MQSB=0.683356;RPB=0.877466;SGB=103.983;VDB=0.892823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P760S|1225|LOC_Os06g30520|protein_coding|CODING|LOC_Os06g30520.1|7|1) FN1478-S.SNP.6:17656121 chr06:017656121 0 W/17656121-17656121 FN1478-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os06g30520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2220-S.SNP.6:17656727 chr06:017656727 0 W/17656727-17656727 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.699713;DP=4215;DP4=1710,2152,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.14066e-09;MQSB=0.668316;RPB=0.993451;SGB=62.7569;VDB=0.867662;EFF=INTRON(MODIFIER||||1225|LOC_Os06g30520|protein_coding|CODING|LOC_Os06g30520.1|5|1) FN-237.SNP.6:17659908 chr06:017659908 0 W/17659908-17659908 FN-237 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g30520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2655-S.SNP.6:17662952 chr06:017662952 0 W/17662952-17662952 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.251275;DP=5380;DP4=2774,2278,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000185874;MQB=1.07667e-17;MQSB=0.912427;RPB=0.999984;SGB=-5.84819;VDB=0.175799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.6:17666078 chr06:017666078 0 W/17666078-17666078 FN1585-S Single Base Substitution G-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3286-S.SNP.6:17680227 chr06:017680227 0 W/17680227-17680227 FN3286-S SNP C -> A AC=2;AN=184;BQB=0.92789;DP=2045;DP4=1058,908,10,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.00806e-05;MQSB=0.38749;RPB=0.512042;SGB=18.2315;VDB=0.286399;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.6:17681507 chr06:017681507 0 W/17681507-17681507 FN-121 Single Base Substitution A-T STOP_GAINED HET LOC_Os06g30560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN997-S.SNP.6:17685116 chr06:017685116 0 W/17685116-17685116 FN997-S Single Base Substitution C-G INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN1262-S.SNP.6:17689497 chr06:017689497 0 W/17689497-17689497 FN1262-S Single Base Substitution G-T STOP_GAINED HET LOC_Os06g30570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1618-S.SNP.6:17695048 chr06:017695048 0 W/17695048-17695048 FN1618-S Single Base Substitution T-C INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1188-S.SNP.6:17697527 chr06:017697527 0 W/17697527-17697527 FN1188-S Single Base Substitution G-C INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3798-S.SNP.6:17716610 chr06:017716610 0 W/17716610-17716610 FN3798-S SNP C -> A AC=2;AN=190;BQB=0.908744;DP=2283;DP4=957,1136,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31142e-09;MQSB=0.94219;RPB=0.276435;SGB=-35.8783;VDB=0.0210056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.6:17721311 chr06:017721311 0 W/17721311-17721311 FN1708-S SNP G -> C AC=1;AN=188;BQB=0.0954696;DP=3603;DP4=1807,1735,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56529e-06;MQSB=0.932536;RPB=0.955739;SGB=-61.9025;VDB=0.646714;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.6:17722353 chr06:017722353 0 W/17722353-17722353 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.985346;DP=2357;DP4=605,1702,3,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.17237e-08;MQSB=0.955927;RPB=0.988843;SGB=-15.3725;VDB=0.267893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.6:17726903 chr06:017726903 0 W/17726903-17726903 FN2668-S SNP C -> G AC=1;AN=200;BQB=0.307507;DP=4531;DP4=2048,2138,15,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9442e-18;MQSB=0.981707;RPB=0.869067;SGB=137.158;VDB=0.0641791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.6:17727839 chr06:017727839 0 W/17727839-17727839 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.946529;DP=2796;DP4=1350,1374,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.6969e-10;MQSB=0.943586;RPB=0.265139;SGB=80.3949;VDB=0.588021;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.6:17728879 chr06:017728879 0 W/17728879-17728879 FN-344 Single Base Substitution C-T INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-344.SNP.6:17728891 chr06:017728891 0 W/17728891-17728891 FN-344 Single Base Substitution A-T INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN1085-S.SNP.6:17731344 chr06:017731344 0 W/17731344-17731344 FN1085-S Single Base Substitution A-G INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3716-S.SNP.6:17736807 chr06:017736807 0 W/17736807-17736807 FN3716-S SNP C -> G AC=1;AN=190;BQB=0.959908;DP=2137;DP4=861,1151,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000328478;MQSB=0.351553;RPB=0.477116;SGB=18.3316;VDB=0.716595;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.6:17740080 chr06:017740080 0 W/17740080-17740080 FN-223 Single Base Substitution G-C INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2684-S.SNP.6:17740082 chr06:017740082 0 W/17740082-17740082 FN2684-S SNP C -> A AC=1;AN=200;BQB=0.78302;DP=5253;DP4=2678,2232,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.03727e-13;MQSB=0.967581;RPB=0.857917;SGB=47.7211;VDB=0.791467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.6:17740217 chr06:017740217 0 W/17740217-17740217 FN2705-S SNP A -> G AC=1;AN=200;BQB=0.809271;DP=4801;DP4=2115,2476,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.91273e-07;MQSB=0.879924;RPB=0.339803;SGB=-0.141083;VDB=0.82583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.6:17740750 chr06:017740750 0 W/17740750-17740750 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.937713;DP=5019;DP4=2323,2387,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.48281e-12;MQSB=0.997551;RPB=0.944793;SGB=54.6902;VDB=0.470043;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.6:17754192 chr06:017754192 0 W/17754192-17754192 FN-103 Single Base Substitution T-C INTERGENIC HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2353.SNP.6:17754192 chr06:017754192 0 W/17754192-17754192 FN2353 SNP T -> C AC=1;AN=192;BQB=0.0779098;DP=4515;DP4=2102,2033,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.28979e-06;MQSB=0.534084;RPB=0.63744;SGB=41.7357;VDB=0.90617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.6:17757845 chr06:017757845 0 W/17757845-17757845 FN-368 Single Base Substitution G-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3486-S.SNP.6:17765128 chr06:017765128 0 W/17765128-17765128 FN3486-S SNP A -> T AC=1;AN=184;BQB=0.565896;DP=2639;DP4=1198,1309,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.16576e-05;MQSB=0.858721;RPB=0.976175;SGB=62.3078;VDB=0.443024;EFF=INTRON(MODIFIER||||898|LOC_Os06g30670|protein_coding|CODING|LOC_Os06g30670.1|5|1) FN4140-S.SNP.6:17772297 chr06:017772297 0 W/17772297-17772297 FN4140-S SNP G -> A AC=2;AN=170;BQB=0.99344;DP=2429;DP4=1044,1286,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.90941e-13;MQSB=0.956692;RPB=0.358049;SGB=96.7413;VDB=0.336986;EFF=INTRON(MODIFIER||||319|LOC_Os06g30680|protein_coding|CODING|LOC_Os06g30680.1|1|1) FN1731-S.SNP.6:17773444 chr06:017773444 0 W/17773444-17773444 FN1731-S SNP A -> C AC=1;AN=188;BQB=0.0744566;DP=3116;DP4=2056,1014,20,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.26541e-09;MQSB=0.87534;RPB=0.858562;SGB=-69.186;VDB=0.584184;EFF=INTRON(MODIFIER||||319|LOC_Os06g30680|protein_coding|CODING|LOC_Os06g30680.1|1|1) FN751-S.SNP.6:17773913 chr06:017773913 0 W/17773913-17773913 FN751-S Single Base Substitution T-C INTRON HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2172-S.SNP.6:17775427 chr06:017775427 0 W/17775427-17775427 FN2172-S SNP C -> A AC=1;AN=168;BQB=0.000384098;DP=3909;DP4=2235,1616,22,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.61844e-07;MQSB=0.869432;RPB=0.732886;SGB=-191.465;VDB=0.243902;EFF=INTRON(MODIFIER||||319|LOC_Os06g30680|protein_coding|CODING|LOC_Os06g30680.1|5|1) FN2650-S.SNP.6:17776290 chr06:017776290 0 W/17776290-17776290 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.954142;DP=4761;DP4=2256,2244,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00042008;MQB=1.48586e-12;MQSB=0.328227;RPB=0.958286;SGB=-92.8849;VDB=0.166043;EFF=INTRON(MODIFIER||||319|LOC_Os06g30680|protein_coding|CODING|LOC_Os06g30680.1|6|1) FN3772-S.SNP.6:17778336 chr06:017778336 0 W/17778336-17778336 FN3772-S SNP G -> A AC=1;AN=190;BQB=0.990762;DP=2619;DP4=1301,1249,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00022937;MQSB=0.965177;RPB=0.847822;SGB=21.7749;VDB=0.605618;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.6:17778807 chr06:017778807 0 W/17778807-17778807 FN-174 Single Base Substitution A-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2097-S.SNP.6:17779610 chr06:017779610 0 W/17779610-17779610 FN2097-S SNP C -> G AC=2;AN=168;BQB=0.916255;DP=1212;DP4=644,513,6,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.54162e-11;MQSB=0.857305;RPB=0.99174;SGB=74.3269;VDB=0.834857;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.6:17782892 chr06:017782892 0 W/17782892-17782892 FN3921-S SNP A -> T AC=1;AN=158;BQB=0.914245;DP=2109;DP4=961,921,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00109773;MQSB=0.960021;RPB=0.387579;SGB=33.9591;VDB=0.598254;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.6:17785150 chr06:017785150 0 W/17785150-17785150 FN-178 Single Base Substitution A-T INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2619-S.SNP.6:17787494 chr06:017787494 0 W/17787494-17787494 FN2619-S SNP C -> A AC=1;AN=198;BQB=0.983396;DP=3978;DP4=1852,1922,20,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.5734e-16;MQSB=0.744142;RPB=0.738444;SGB=90.4807;VDB=0.726737;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.6:17796610 chr06:017796610 0 W/17796610-17796610 FN-129 Single Base Substitution T-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN4201-S.SNP.6:17800848 chr06:017800848 0 W/17800848-17800848 FN4201-S SNP G -> A AC=2;AN=170;BQB=0.994979;DP=2489;DP4=1309,1093,16,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.56043e-18;MQSB=0.999444;RPB=0.492166;SGB=123.397;VDB=0.106239;EFF=INTRON(MODIFIER||||1662|LOC_Os06g30700|protein_coding|CODING|LOC_Os06g30700.1|12|1) FN2183-S.SNP.6:17809084 chr06:017809084 0 W/17809084-17809084 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.99982;DP=5066;DP4=2489,2282,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0746151;MQB=0.751529;MQSB=2.05007e-05;RPB=0.91798;SGB=43.2083;VDB=0.771201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A643T|1662|LOC_Os06g30700|protein_coding|CODING|LOC_Os06g30700.1|4|1) FN2268-S.SNP.6:17817503 chr06:017817503 0 W/17817503-17817503 FN2268-S SNP G -> T AC=1;AN=190;BQB=0.0708527;DP=4336;DP4=2067,1979,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14189e-13;MQSB=0.278854;RPB=0.89357;SGB=24.3115;VDB=0.847846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G86C|143|LOC_Os06g30720|protein_coding|CODING|LOC_Os06g30720.1|2|1) FN2749-S.SNP.6:17819640 chr06:017819640 0 W/17819640-17819640 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.248953;DP=4554;DP4=2039,2215,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03735e-09;MQSB=0.877233;RPB=0.50902;SGB=86.5007;VDB=0.826289;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.6:17820567 chr06:017820567 0 W/17820567-17820567 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.518846;DP=2210;DP4=962,1176,1,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.000803006;MQSB=4.48757e-11;RPB=0.999522;SGB=27.9928;VDB=0.943678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.6:17829007 chr06:017829007 0 W/17829007-17829007 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.999931;DP=2965;DP4=1421,1220,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000154186;MQSB=0.00144356;RPB=0.933138;SGB=8.33661;VDB=0.460862;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.6:17830729 chr06:017830729 0 W/17830729-17830729 FN740-S Single Base Substitution C-T INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN1276-S.SNP.6:17842721 chr06:017842721 0 W/17842721-17842721 FN1276-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g30760 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1276-S.SNP.6:17842722 chr06:017842722 0 W/17842722-17842722 FN1276-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3862-S.SNP.6:17852453 chr06:017852453 0 W/17852453-17852453 FN3862-S SNP G -> A AC=1;AN=158;BQB=0.158525;DP=2461;DP4=1217,1116,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000523324;MQSB=0.924444;RPB=0.961861;SGB=55.806;VDB=0.440098;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.6:17856206 chr06:017856206 0 W/17856206-17856206 FN4312-S SNP C -> T AC=1;AN=170;BQB=0.967928;DP=2453;DP4=1271,1112,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00163066;MQB=0.0523949;MQSB=0.093163;RPB=0.340252;SGB=25.6601;VDB=0.196869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.6:17856260 chr06:017856260 0 W/17856260-17856260 FN1716-S SNP T -> C AC=1;AN=188;BQB=0.911053;DP=3328;DP4=1879,1410,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0261418;MQB=0.00198942;MQSB=1.24019e-09;RPB=0.427784;SGB=46.6141;VDB=0.561202;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.6:17856261 chr06:017856261 0 W/17856261-17856261 FN1716-S SNP C -> T AC=1;AN=188;BQB=0.0936414;DP=3339;DP4=1880,1416,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0269542;MQB=0.0539338;MQSB=2.94203e-09;RPB=0.341939;SGB=-37.8212;VDB=0.730627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.6:17857435 chr06:017857435 0 W/17857435-17857435 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.967812;DP=2492;DP4=1166,1236,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000401284;MQB=1.30313e-08;MQSB=0.797668;RPB=0.461176;SGB=64.5449;VDB=0.194707;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.6:17859006 chr06:017859006 0 W/17859006-17859006 FN942-S Single Base Substitution G-A INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN3510-S.SNP.6:17863015 chr06:017863015 0 W/17863015-17863015 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.956458;DP=4260;DP4=2028,2115,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.308e-11;MQSB=0.762408;RPB=0.634082;SGB=67.8739;VDB=0.163591;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R385|475|LOC_Os06g30790|protein_coding|CODING|LOC_Os06g30790.1|2|1) FN3696-S.SNP.6:17866371 chr06:017866371 0 W/17866371-17866371 FN3696-S SNP A -> G AC=1;AN=190;BQB=0.906838;DP=2292;DP4=1029,1142,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48048e-09;MQSB=0.908305;RPB=0.99975;SGB=7.21887;VDB=0.602498;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y143|146|LOC_Os06g30800|protein_coding|CODING|LOC_Os06g30800.1|4|1) FN3701-S.SNP.6:17868246 chr06:017868246 0 W/17868246-17868246 FN3701-S SNP G -> A AC=1;AN=190;BQB=0.974732;DP=2342;DP4=1354,893,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25878e-09;MQSB=0.930655;RPB=0.999992;SGB=71.8647;VDB=0.28543;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.6:17869150 chr06:017869150 0 W/17869150-17869150 FN923-S Single Base Substitution A-G INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2386.SNP.6:17869553 chr06:017869553 0 W/17869553-17869553 FN2386 SNP G -> T AC=1;AN=192;BQB=0.721128;DP=4771;DP4=2020,2327,5,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0002096;MQB=1.07725e-10;MQSB=0.998154;RPB=0.859949;SGB=54.0374;VDB=0.514989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P108H|210|LOC_Os06g30810|protein_coding|CODING|LOC_Os06g30810.1|1|1) FN1534-S.SNP.6:17870050 chr06:017870050 0 W/17870050-17870050 FN1534-S Single Base Substitution C-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-213.SNP.6:17871217 chr06:017871217 0 W/17871217-17871217 FN-213 Single Base Substitution C-G UTR_3_PRIME HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2438.SNP.6:17878662 chr06:017878662 0 W/17878662-17878662 FN2438 SNP C -> T AC=1;AN=200;BQB=0.715191;DP=4588;DP4=2098,2152,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.78374e-11;MQSB=0.706706;RPB=0.996788;SGB=81.8956;VDB=0.814724;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.6:17878996 chr06:017878996 0 W/17878996-17878996 FN755-S Single Base Substitution C-T INTERGENIC HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN723-S.SNP.6:17883718 chr06:017883718 0 W/17883718-17883718 FN723-S Single Base Substitution C-T INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2430.SNP.6:17891730 chr06:017891730 0 W/17891730-17891730 FN2430 SNP G -> T AC=2;AN=200;BQB=0.780229;DP=4303;DP4=2004,1967,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000232396;MQB=1.5572e-21;MQSB=0.949327;RPB=0.990202;SGB=-47.1605;VDB=0.505135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.6:17895739 chr06:017895739 0 W/17895739-17895739 FN3774-S SNP C -> A AC=2;AN=190;BQB=0.997563;DP=3050;DP4=1434,1525,18,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00163934;MQB=9.35654e-15;MQSB=0.658335;RPB=0.734883;SGB=149.281;VDB=0.515807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H167N|1224|LOC_Os06g30840|protein_coding|CODING|LOC_Os06g30840.1|1|1) FN934-S.SNP.6:17899238 chr06:017899238 0 W/17899238-17899238 FN934-S Single Base Substitution G-T INTERGENIC HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2203-S.SNP.6:17899995 chr06:017899995 0 W/17899995-17899995 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.999998;DP=4258;DP4=1915,2075,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.35645e-05;MQSB=0.451392;RPB=0.316498;SGB=35.4339;VDB=0.0571085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.6:17902185 chr06:017902185 0 W/17902185-17902185 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.291673;DP=2568;DP4=1153,1242,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.24231e-06;MQSB=0.0907735;RPB=0.031558;SGB=-107.416;VDB=0.606048;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.6:17908161 chr06:017908161 0 W/17908161-17908161 FN1426-S Single Base Substitution T-C INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1410-S.SNP.6:17911557 chr06:017911557 0 W/17911557-17911557 FN1410-S Single Base Substitution T-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2282.SNP.6:17912033 chr06:017912033 0 W/17912033-17912033 FN2282 SNP C -> T AC=1;AN=192;BQB=0.612218;DP=4702;DP4=2332,2092,23,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.99815e-22;MQSB=0.516142;RPB=0.00773006;SGB=-43.1695;VDB=0.129709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.6:17912034 chr06:017912034 0 W/17912034-17912034 FN2282 SNP G -> T AC=1;AN=192;BQB=0.456338;DP=4705;DP4=2307,2072,18,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.14103e-19;MQSB=0.371905;RPB=0.0483688;SGB=62.2505;VDB=0.134995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.6:17912042 chr06:017912042 0 W/17912042-17912042 FN2282 SNP C -> T AC=1;AN=192;BQB=0.764993;DP=4730;DP4=2293,2116,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.70536e-16;MQSB=0.703806;RPB=0.242005;SGB=59.6861;VDB=0.113206;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.6:17914572 chr06:017914572 0 W/17914572-17914572 FN-174 Single Base Substitution A-C INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3820-S.SNP.6:17924167 chr06:017924167 0 W/17924167-17924167 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.977678;DP=2411;DP4=1014,1277,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29147e-06;MQSB=0.994406;RPB=0.986568;SGB=21.8853;VDB=0.386322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.6:17924174 chr06:017924174 0 W/17924174-17924174 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.950482;DP=2452;DP4=1044,1326,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49575e-07;MQSB=0.98192;RPB=0.843654;SGB=28.9929;VDB=0.775348;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.6:17925804 chr06:017925804 0 W/17925804-17925804 FN627-S Single Base Substitution T-A INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2411.SNP.6:17925805 chr06:017925805 0 W/17925805-17925805 FN2411 SNP A -> T AC=2;AN=200;BQB=0.70041;DP=4697;DP4=2167,2007,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.69813e-27;MQSB=0.589138;RPB=0.857416;SGB=65.6709;VDB=0.294942;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.6:17925805 chr06:017925805 0 W/17925805-17925805 FN3487-S SNP A -> T AC=1;AN=184;BQB=0.897051;DP=2791;DP4=1380,1259,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06466e-07;MQSB=0.962823;RPB=1;SGB=42.7914;VDB=0.0811703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.6:17926940 chr06:017926940 0 W/17926940-17926940 FN2272-S SNP C -> T AC=1;AN=190;BQB=0.76705;DP=3570;DP4=1591,1611,16,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000280112;MQB=3.64403e-13;MQSB=0.395641;RPB=0.651662;SGB=96.5165;VDB=0.811239;EFF=INTRON(MODIFIER||||144|LOC_Os06g30870|protein_coding|CODING|LOC_Os06g30870.1|1|1) FN-97.SNP.6:17931218 chr06:017931218 0 W/17931218-17931218 FN-97 Single Base Substitution T-C INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-257.SNP.6:17931790 chr06:017931790 0 W/17931790-17931790 FN-257 Single Base Substitution C-T INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN1075-S.SNP.6:17934547 chr06:017934547 0 W/17934547-17934547 FN1075-S Single Base Substitution T-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1045-S.SNP.6:17938521 chr06:017938521 0 W/17938521-17938521 FN1045-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN628-S.SNP.6:17941033 chr06:017941033 0 W/17941033-17941033 FN628-S Single Base Substitution T-A INTRON HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3797-S.SNP.6:17948567 chr06:017948567 0 W/17948567-17948567 FN3797-S SNP A -> T AC=1;AN=190;BQB=0.867787;DP=2824;DP4=1254,1442,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47953e-07;MQSB=0.875383;RPB=0.571289;SGB=43.2083;VDB=0.0936811;EFF=INTRON(MODIFIER||||1111|LOC_Os06g30901|protein_coding|CODING|LOC_Os06g30901.1|29|1) FN-210.SNP.6:17956477 chr06:017956477 0 W/17956477-17956477 FN-210 Single Base Substitution C-T INTRON HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3837-S.SNP.6:17962954 chr06:017962954 0 W/17962954-17962954 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.982338;DP=2551;DP4=1235,1239,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.30704e-09;MQSB=0.997151;RPB=0.995564;SGB=36.1006;VDB=0.56105;EFF=INTRON(MODIFIER||||1111|LOC_Os06g30901|protein_coding|CODING|LOC_Os06g30901.1|12|1) FN3837-S.SNP.6:17962955 chr06:017962955 0 W/17962955-17962955 FN3837-S SNP A -> T AC=1;AN=190;BQB=0.960573;DP=2570;DP4=1239,1263,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.4268e-08;MQSB=0.995431;RPB=0.920431;SGB=49.0954;VDB=0.323915;EFF=INTRON(MODIFIER||||1111|LOC_Os06g30901|protein_coding|CODING|LOC_Os06g30901.1|12|1) FN3578-S.SNP.6:17965107 chr06:017965107 0 W/17965107-17965107 FN3578-S SNP A -> T AC=2;AN=188;BQB=0.531908;DP=2638;DP4=1273,1263,15,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.50015e-16;MQSB=0.889185;RPB=0.946413;SGB=71.8555;VDB=0.987029;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A340|1111|LOC_Os06g30901|protein_coding|CODING|LOC_Os06g30901.1|8|1) FN3577-S.SNP.6:17971417 chr06:017971417 0 W/17971417-17971417 FN3577-S SNP G -> T AC=2;AN=188;BQB=0.993951;DP=2933;DP4=1344,1494,10,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.15431e-18;MQSB=0.999459;RPB=0.931823;SGB=27.1443;VDB=0.456082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.6:17973048 chr06:017973048 0 W/17973048-17973048 FN1561-S Single Base Substitution G-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2304.SNP.6:17990148 chr06:017990148 0 W/17990148-17990148 FN2304 SNP T -> C AC=1;AN=192;BQB=0.973147;DP=4589;DP4=2082,2248,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.95393e-16;MQSB=0.641738;RPB=0.937212;SGB=59.6861;VDB=0.445223;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.6:17991583 chr06:017991583 0 W/17991583-17991583 FN2190-S SNP C -> A AC=1;AN=190;BQB=0.938708;DP=4870;DP4=2244,2309,21,14;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0;MQB=0.00051604;MQSB=0.616214;RPB=0.896024;SGB=114.286;VDB=0.205441;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.6:17992188 chr06:017992188 0 W/17992188-17992188 FN_N2-29a-1 Single Base Substitution C-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN798-S.SNP.6:17995273 chr06:017995273 0 W/17995273-17995273 FN798-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3531-S.SNP.6:18011958 chr06:018011958 0 W/18011958-18011958 FN3531-S SNP T -> A AC=1;AN=188;BQB=0.592829;DP=2640;DP4=1207,1327,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.00074083;MQSB=0.415111;RPB=0.99417;SGB=18.4463;VDB=0.56783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.6:18014600 chr06:018014600 0 W/18014600-18014600 FN-143 Single Base Substitution C-T INTERGENIC HOMO SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN950-S.SNP.6:18070645 chr06:018070645 0 W/18070645-18070645 FN950-S Single Base Substitution T-C INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1513-S.SNP.6:18079454 chr06:018079454 0 W/18079454-18079454 FN1513-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g31090 GAMYB-binding protein, putative, expressed SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN2467.SNP.6:18080061 chr06:018080061 0 W/18080061-18080061 FN2467 SNP C -> T AC=1;AN=200;BQB=0.980894;DP=4818;DP4=2191,2338,13,14;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=8.89677e-08;MQSB=0.0208774;RPB=0.974626;SGB=87.1368;VDB=0.563678;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.6:18086008 chr06:018086008 0 W/18086008-18086008 FN3442-S SNP C -> T AC=2;AN=184;BQB=0.235917;DP=3405;DP4=1985,1259,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.80944e-11;MQSB=0.898542;RPB=0.711857;SGB=58.5801;VDB=0.88519;EFF=INTRON(MODIFIER||||536|LOC_Os06g31100|protein_coding|CODING|LOC_Os06g31100.1|1|1) FN999-S.SNP.6:18087423 chr06:018087423 0 W/18087423-18087423 FN999-S Single Base Substitution G-A INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN1326-S.SNP.6:18089270 chr06:018089270 0 W/18089270-18089270 FN1326-S Single Base Substitution T-C INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN513-S.SNP.6:18089296 chr06:018089296 0 W/18089296-18089296 FN513-S Single Base Substitution T-A INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN513-S.SNP.6:18089297 chr06:018089297 0 W/18089297-18089297 FN513-S Single Base Substitution A-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN4112-S.SNP.6:18090301 chr06:018090301 0 W/18090301-18090301 FN4112-S SNP C -> A AC=1;AN=182;BQB=0.852474;DP=1433;DP4=760,614,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0;MQB=0.0130106;MQSB=0.502616;RPB=0.817799;SGB=28.6061;VDB=0.885234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S30R|295|LOC_Os06g31120|protein_coding|CODING|LOC_Os06g31120.1|2|1) FN969-S.SNP.6:18091776 chr06:018091776 0 W/18091776-18091776 FN969-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN837-S.SNP.6:18092437 chr06:018092437 0 W/18092437-18092437 FN837-S Single Base Substitution G-T INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN501-S.SNP.6:18092851 chr06:018092851 0 W/18092851-18092851 FN501-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g31140 retrotransposon protein, putative, unclassified, expressed SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN961-S.SNP.6:18096316 chr06:018096316 0 W/18096316-18096316 FN961-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os06g31150 retrotransposon protein, putative, unclassified, expressed SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3343-S.SNP.6:18097227 chr06:018097227 0 W/18097227-18097227 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.998971;DP=3419;DP4=1525,1807,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=4.47493e-07;MQSB=0.266683;RPB=0.99998;SGB=46.3132;VDB=0.485546;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I168|492|LOC_Os06g31150|protein_coding|CODING|LOC_Os06g31150.1|2|1) FN3650-S.SNP.6:18098369 chr06:018098369 0 W/18098369-18098369 FN3650-S SNP C -> G AC=2;AN=190;BQB=0.997106;DP=2373;DP4=1155,1113,11,21;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.46471e-11;MQSB=0.00620251;RPB=0.93534;SGB=103.624;VDB=0.333514;EFF=INTERGENIC(MODIFIER||||||||||1) FN761-S.SNP.6:18100390 chr06:018100390 0 W/18100390-18100390 FN761-S Single Base Substitution T-C INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1314-S.SNP.6:18105878 chr06:018105878 0 W/18105878-18105878 FN1314-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g31160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN3601-S.SNP.6:18105878 chr06:018105878 0 W/18105878-18105878 FN3601-S SNP C -> T AC=2;AN=190;BQB=0.195853;DP=2749;DP4=1403,1256,18,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000363769;MQB=1.98414e-09;MQSB=0.632861;RPB=0.886367;SGB=61.9679;VDB=0.458999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S986L|1187|LOC_Os06g31160|protein_coding|CODING|LOC_Os06g31160.1|6|1) FN2257-S.SNP.6:18107602 chr06:018107602 0 W/18107602-18107602 FN2257-S SNP G -> A AC=1;AN=190;BQB=0.913537;DP=1547;DP4=749,577,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0129282;MQB=0.679781;MQSB=0.0010782;RPB=0.977952;SGB=14.7784;VDB=0.17561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R202C|365|LOC_Os06g31170|protein_coding|CODING|LOC_Os06g31170.1|4|1) FN1486-S.SNP.6:18110050 chr06:018110050 0 W/18110050-18110050 FN1486-S Single Base Substitution C-G INTRON HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN889-S.SNP.6:18113562 chr06:018113562 0 W/18113562-18113562 FN889-S Single Base Substitution T-C INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. W577-3-1.SNP.6:18115134 chr06:018115134 0 W/18115134-18115134 W577-3-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3766-S.SNP.6:18115258 chr06:018115258 0 W/18115258-18115258 FN3766-S SNP C -> A AC=2;AN=190;BQB=0.913981;DP=957;DP4=88,820,2,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00104493;MQB=0.00548548;MQSB=0.000505702;RPB=0.737817;SGB=30.8803;VDB=0.168387;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.6:18116730 chr06:018116730 0 W/18116730-18116730 FN4068-S SNP A -> G AC=2;AN=182;BQB=0.971007;DP=2936;DP4=1578,1275,16,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.94358e-19;MQSB=0.99621;RPB=0.955451;SGB=125.307;VDB=0.236351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S687P|697|LOC_Os06g31190|protein_coding|CODING|LOC_Os06g31190.1|3|1) FN4068-S.SNP.6:18116735 chr06:018116735 0 W/18116735-18116735 FN4068-S SNP C -> T AC=2;AN=182;BQB=0.952476;DP=2950;DP4=1593,1280,16,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.85745e-19;MQSB=0.983892;RPB=0.995122;SGB=125.307;VDB=0.299448;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R685K|697|LOC_Os06g31190|protein_coding|CODING|LOC_Os06g31190.1|3|1) FN3934-S.SNP.6:18131802 chr06:018131802 0 W/18131802-18131802 FN3934-S SNP T -> C AC=1;AN=158;BQB=0.998668;DP=2173;DP4=967,1130,14,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.07802e-10;MQSB=0.638968;RPB=0.994942;SGB=82.0227;VDB=0.475192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S129P|645|LOC_Os06g31200|protein_coding|CODING|LOC_Os06g31200.1|1|1) FN-184.SNP.6:18139671 chr06:018139671 0 W/18139671-18139671 FN-184 Single Base Substitution G-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3592-S.SNP.6:18145846 chr06:018145846 0 W/18145846-18145846 FN3592-S SNP C -> A AC=1;AN=188;BQB=0.953228;DP=1820;DP4=1519,245,11,1;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.0158216;MQSB=0.0514763;RPB=0.87639;SGB=48.979;VDB=0.770067;EFF=UTR_3_PRIME(MODIFIER||51||801|LOC_Os06g31210|protein_coding|CODING|LOC_Os06g31210.1|17|1) FN1380-S.SNP.6:18154209 chr06:018154209 0 W/18154209-18154209 FN1380-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g31210 methionyl-tRNA synthetase, putative, expressed SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN_789-2-1.SNP.6:18197714 chr06:018197714 0 W/18197714-18197714 FN_789-2-1 Single Base Substitution T-C Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-3-1.SNP.6:18197714 chr06:018197714 0 W/18197714-18197714 FN_789-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1662-S.SNP.6:18205781 chr06:018205781 0 W/18205781-18205781 FN1662-S Single Base Substitution G-A INTERGENIC Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2340.SNP.6:18205781 chr06:018205781 0 W/18205781-18205781 FN2340 SNP G -> A AC=2;AN=192;BQB=0.412301;DP=1920;DP4=944,859,12,8;HOB=0.0206163;ICB=0.494846;MQ=32;MQ0F=0;MQB=0.0721083;MQSB=0.731492;RPB=0.147499;SGB=85.7252;VDB=5.05301e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.6:18214126 chr06:018214126 0 W/18214126-18214126 FN1689-S SNP G -> A AC=2;AN=188;BQB=0.673871;DP=3462;DP4=1559,1827,10,5;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0;MQB=0.249717;MQSB=0.00151925;RPB=0.576839;SGB=43.0708;VDB=0.53426;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.6:18214619 chr06:018214619 0 W/18214619-18214619 FN1734-S SNP T -> A AC=1;AN=188;BQB=0.976222;DP=4133;DP4=2203,1901,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0;MQB=0.00228732;MQSB=0.00409589;RPB=0.713673;SGB=28.6195;VDB=0.454079;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.6:18280030 chr06:018280030 0 W/18280030-18280030 FN230-S Single Base Substitution T-C INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2204-S.SNP.6:18280784 chr06:018280784 0 W/18280784-18280784 FN2204-S SNP A -> G AC=2;AN=190;BQB=0.0448919;DP=5119;DP4=2601,2152,27,35;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.00293026;MQB=7.20545e-17;MQSB=0.00229325;RPB=0.291951;SGB=276.789;VDB=0.0522162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.6:18832445 chr06:018832445 0 W/18832445-18832445 FN2671-S SNP G -> C AC=1;AN=200;BQB=0.874153;DP=4451;DP4=1963,2273,5,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.08339e-05;MQSB=0.875602;RPB=0.292201;SGB=36.6644;VDB=0.873066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.6:18839549 chr06:018839549 0 W/18839549-18839549 FN1543-S Single Base Substitution T-G INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN229-S.SNP.6:18911119 chr06:018911119 0 W/18911119-18911119 FN229-S Single Base Substitution A-G INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN439-S.SNP.6:19200316 chr06:019200316 0 W/19200316-19200316 FN439-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-281.SNP.6:19267263 chr06:019267263 0 W/19267263-19267263 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3933-S.SNP.6:19290324 chr06:019290324 0 W/19290324-19290324 FN3933-S SNP G -> A AC=2;AN=158;BQB=0.999967;DP=2346;DP4=1092,1144,22,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.74461e-15;MQSB=0.857842;RPB=0.815185;SGB=87.9846;VDB=0.401006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.6:19291115 chr06:019291115 0 W/19291115-19291115 FN3039-S SNP G -> T AC=2;AN=184;BQB=0.999593;DP=2217;DP4=761,1309,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08731e-14;MQSB=0.937601;RPB=0.455029;SGB=81.5311;VDB=0.492229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.6:19306617 chr06:019306617 0 W/19306617-19306617 FN2664-S SNP C -> T AC=2;AN=200;BQB=0.97938;DP=4707;DP4=2391,1931,32,30;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0;MQB=2.89884e-28;MQSB=5.85012e-05;RPB=0.300339;SGB=213.318;VDB=0.638405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.6:19312814 chr06:019312814 0 W/19312814-19312814 FN2530-S SNP A -> G AC=1;AN=198;BQB=0.990747;DP=4162;DP4=2096,1802,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=9.48862e-05;MQSB=0.208372;RPB=0.384547;SGB=37.1297;VDB=0.733112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.6:19331149 chr06:019331149 0 W/19331149-19331149 FN3673-S SNP G -> T AC=2;AN=190;BQB=0.859958;DP=2804;DP4=1336,1360,8,21;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0;MQB=1.06059e-12;MQSB=0.381175;RPB=0.323041;SGB=92.9626;VDB=0.470194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.6:19332141 chr06:019332141 0 W/19332141-19332141 FN3841-S SNP G -> A AC=1;AN=190;BQB=0.781032;DP=2627;DP4=1313,1194,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28603e-06;MQSB=0.89051;RPB=0.920592;SGB=25.439;VDB=0.726254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.6:19339850 chr06:019339850 0 W/19339850-19339850 FN1481-S Single Base Substitution T-C INTRON HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2195-S.SNP.6:19350919 chr06:019350919 0 W/19350919-19350919 FN2195-S SNP C -> A AC=2;AN=190;BQB=0.938048;DP=5054;DP4=2168,2509,13,15;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.00237436;MQB=1.52698e-07;MQSB=0.826039;RPB=0.375083;SGB=56.8601;VDB=0.0857047;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.6:19378138 chr06:019378138 0 W/19378138-19378138 FN-132 Single Base Substitution T-G INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2325.SNP.6:19382350 chr06:019382350 0 W/19382350-19382350 FN2325 SNP G -> T AC=1;AN=192;BQB=0.665537;DP=4719;DP4=2301,2158,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=3.81398e-08;MQSB=0.946051;RPB=0.645344;SGB=10.4835;VDB=0.577363;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T498|1459|LOC_Os06g33290|protein_coding|CODING|LOC_Os06g33290.1|3|1) FN1196-S.SNP.6:19384176 chr06:019384176 0 W/19384176-19384176 FN1196-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g33290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1615-S.SNP.6:19387649 chr06:019387649 0 W/19387649-19387649 FN1615-S Single Base Substitution G-A STOP_GAINED Homo LOC_Os06g33300 retrotransposon protein, putative, unclassified, expressed SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN761-S.SNP.6:19391559 chr06:019391559 0 W/19391559-19391559 FN761-S Single Base Substitution C-T INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN491-S.SNP.6:19395541 chr06:019395541 0 W/19395541-19395541 FN491-S Single Base Substitution C-G INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN-300.SNP.6:19419740 chr06:019419740 0 W/19419740-19419740 FN-300 Single Base Substitution C-T INTRON HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN3549-S.SNP.6:19446004 chr06:019446004 0 W/19446004-19446004 FN3549-S SNP T -> A AC=2;AN=188;BQB=0.921346;DP=3379;DP4=1603,1573,9,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.99594e-12;MQSB=0.870815;RPB=0.941916;SGB=64.3306;VDB=0.0986334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R94W|197|LOC_Os06g33390|protein_coding|CODING|LOC_Os06g33390.1|1|1) FN3549-S.SNP.6:19446005 chr06:019446005 0 W/19446005-19446005 FN3549-S SNP C -> A AC=2;AN=188;BQB=0.598116;DP=3395;DP4=1650,1640,9,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.86176e-11;MQSB=0.841294;RPB=0.99503;SGB=80.782;VDB=0.251245;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R93S|197|LOC_Os06g33390|protein_coding|CODING|LOC_Os06g33390.1|1|1) FN2492.SNP.6:19446481 chr06:019446481 0 W/19446481-19446481 FN2492 SNP C -> T AC=1;AN=200;BQB=0.790527;DP=4091;DP4=1894,1790,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76947e-09;MQSB=0.138967;RPB=0.0802695;SGB=34.6953;VDB=0.355011;EFF=UTR_5_PRIME(MODIFIER||198||197|LOC_Os06g33390|protein_coding|CODING|LOC_Os06g33390.1|1|1) FN-104.SNP.6:19457526 chr06:019457526 0 W/19457526-19457526 FN-104 Single Base Substitution A-C INTRON HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1453-S.SNP.6:19457744 chr06:019457744 0 W/19457744-19457744 FN1453-S Single Base Substitution C-T INTRON HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN714-S.SNP.6:19460993 chr06:019460993 0 W/19460993-19460993 FN714-S Single Base Substitution G-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2130-S.SNP.6:19462221 chr06:019462221 0 W/19462221-19462221 FN2130-S SNP T -> A AC=1;AN=168;BQB=0.410134;DP=4073;DP4=2276,1760,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2721e-06;MQSB=0.926354;RPB=0.527331;SGB=2.75988;VDB=0.188422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.6:19463369 chr06:019463369 0 W/19463369-19463369 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.981408;DP=2912;DP4=1488,1354,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.57487e-08;MQSB=0.972742;RPB=0.997928;SGB=53.2642;VDB=0.990002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.6:19476836 chr06:019476836 0 W/19476836-19476836 FN1202-S Single Base Substitution T-C INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1351-S.SNP.6:19476895 chr06:019476895 0 W/19476895-19476895 FN1351-S Single Base Substitution A-T INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2556-S.SNP.6:19479069 chr06:019479069 0 W/19479069-19479069 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.918932;DP=3755;DP4=1693,1871,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000266312;MQB=1.78637e-13;MQSB=0.999993;RPB=0.935423;SGB=79.6954;VDB=0.116044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.6:19500464 chr06:019500464 0 W/19500464-19500464 FN2628-S SNP A -> G AC=1;AN=200;BQB=0.851539;DP=3573;DP4=1023,1776,13,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.56419e-11;MQSB=9.41154e-05;RPB=0.868565;SGB=-104.859;VDB=0.196726;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A20|259|LOC_Os06g33470|protein_coding|CODING|LOC_Os06g33470.1|1|1) FN785-S.SNP.6:19513835 chr06:019513835 0 W/19513835-19513835 FN785-S Single Base Substitution C-T INTRON HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2781-S.SNP.6:19518495 chr06:019518495 0 W/19518495-19518495 FN2781-S SNP G -> A AC=2;AN=198;BQB=0.861915;DP=3919;DP4=1868,1828,18,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.25383e-19;MQSB=0.960785;RPB=0.523389;SGB=136.856;VDB=0.18368;EFF=INTRON(MODIFIER||||923|LOC_Os06g33520|protein_coding|CODING|LOC_Os06g33520.1|9|1) FN2082-S.SNP.6:19518741 chr06:019518741 0 W/19518741-19518741 FN2082-S SNP A -> T AC=1;AN=168;BQB=0.917403;DP=3969;DP4=2096,1828,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.6674e-16;MQSB=0.972999;RPB=0.649759;SGB=61.0778;VDB=0.590044;EFF=INTRON(MODIFIER||||923|LOC_Os06g33520|protein_coding|CODING|LOC_Os06g33520.1|9|1) FN1551-S.SNP.6:19521731 chr06:019521731 0 W/19521731-19521731 FN1551-S Single Base Substitution A-G INTRON HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2098-S.SNP.6:19525082 chr06:019525082 0 W/19525082-19525082 FN2098-S SNP C -> T AC=2;AN=168;BQB=0.207962;DP=3436;DP4=2223,1126,31,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.54613e-22;MQSB=0.554658;RPB=0.961026;SGB=-229.993;VDB=0.0220662;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.6:19532307 chr06:019532307 0 W/19532307-19532307 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.540397;DP=2335;DP4=1231,1022,2,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.8796e-05;MQSB=0.782638;RPB=0.936717;SGB=29.5899;VDB=0.566336;EFF=INTRON(MODIFIER||||352|LOC_Os06g33549|protein_coding|CODING|LOC_Os06g33549.1|6|1) FN3578-S.SNP.6:19548193 chr06:019548193 0 W/19548193-19548193 FN3578-S SNP T -> C AC=2;AN=188;BQB=0.973126;DP=2664;DP4=1314,1266,20,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.71125e-25;MQSB=0.987648;RPB=0.210325;SGB=128.879;VDB=0.795453;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L251P|694|LOC_Os06g33570|protein_coding|CODING|LOC_Os06g33570.1|4|1) FN1675-S.SNP.6:19552656 chr06:019552656 0 W/19552656-19552656 FN1675-S SNP C -> T AC=1;AN=188;BQB=0.374954;DP=3440;DP4=1937,1465,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.11003e-06;MQSB=0.762787;RPB=0.979054;SGB=-63.3592;VDB=0.240097;EFF=UTR_3_PRIME(MODIFIER||11||694|LOC_Os06g33570|protein_coding|CODING|LOC_Os06g33570.1|8|1) FN660-S.SNP.6:19554878 chr06:019554878 0 W/19554878-19554878 FN660-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN824-S.SNP.6:19575026 chr06:019575026 0 W/19575026-19575026 FN824-S Single Base Substitution G-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. W607-2-1.SNP.6:19578826 chr06:019578826 0 W/19578826-19578826 W607-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2492.SNP.6:19579612 chr06:019579612 0 W/19579612-19579612 FN2492 SNP A -> G AC=1;AN=200;BQB=0.248072;DP=4916;DP4=2199,2470,12,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00264443;MQB=7.01125e-06;MQSB=0.389799;RPB=0.995299;SGB=65.5058;VDB=0.669196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.6:19581695 chr06:019581695 0 W/19581695-19581695 FN-199 Single Base Substitution G-C INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4132-S.SNP.6:19582256 chr06:019582256 0 W/19582256-19582256 FN4132-S SNP G -> A AC=1;AN=182;BQB=0.82404;DP=2825;DP4=1365,1379,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.07659e-09;MQSB=0.915624;RPB=0.988041;SGB=57.644;VDB=0.978295;EFF=INTRON(MODIFIER||||150|LOC_Os06g33640|protein_coding|CODING|LOC_Os06g33640.2|2|1) FN2676-S.SNP.6:19582598 chr06:019582598 0 W/19582598-19582598 FN2676-S SNP A -> G AC=2;AN=200;BQB=0.580785;DP=4739;DP4=2284,2249,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.52241e-25;MQSB=0.777766;RPB=0.026768;SGB=148.425;VDB=0.665999;EFF=INTRON(MODIFIER||||150|LOC_Os06g33640|protein_coding|CODING|LOC_Os06g33640.2|2|1) FN-164.SNP.6:19583128 chr06:019583128 0 W/19583128-19583128 FN-164 Single Base Substitution A-T INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN3465-S.SNP.6:19588574 chr06:019588574 0 W/19588574-19588574 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.889114;DP=2589;DP4=1271,1257,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25208e-08;MQSB=0.644879;RPB=0.309365;SGB=71.3514;VDB=0.702177;EFF=INTRON(MODIFIER||||147|LOC_Os06g33650|protein_coding|CODING|LOC_Os06g33650.1|1|1) FN561-S.SNP.6:19590654 chr06:019590654 0 W/19590654-19590654 FN561-S Single Base Substitution C-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. W470-2-1.SNP.6:19595597 chr06:019595597 0 W/19595597-19595597 W470-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN4133-S.SNP.6:19604700 chr06:019604700 0 W/19604700-19604700 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.644467;DP=2787;DP4=1370,1341,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.7979e-07;MQSB=0.999833;RPB=0.615288;SGB=10.5899;VDB=0.242987;EFF=INTRON(MODIFIER||||206|LOC_Os06g33690|protein_coding|CODING|LOC_Os06g33690.1|2|1) FN2689-S.SNP.6:19605660 chr06:019605660 0 W/19605660-19605660 FN2689-S SNP C -> A AC=1;AN=200;BQB=0.934591;DP=4838;DP4=2298,2297,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82674e-13;MQSB=0.973831;RPB=0.965183;SGB=17.5158;VDB=0.710835;EFF=INTRON(MODIFIER||||206|LOC_Os06g33690|protein_coding|CODING|LOC_Os06g33690.1|1|1) FN523-S.SNP.6:19621608 chr06:019621608 0 W/19621608-19621608 FN523-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.6:19621608 chr06:019621608 0 W/19621608-19621608 FN532-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3446-S.SNP.6:19623368 chr06:019623368 0 W/19623368-19623368 FN3446-S SNP A -> C AC=2;AN=184;BQB=0.838067;DP=2577;DP4=1119,1354,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.97272e-13;MQSB=0.99039;RPB=0.147556;SGB=81.5311;VDB=0.670914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.6:19628509 chr06:019628509 0 W/19628509-19628509 FN1516-S Single Base Substitution A-G INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN-289.SNP.6:19632787 chr06:019632787 0 W/19632787-19632787 FN-289 Single Base Substitution C-T INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3970-S.SNP.6:19642768 chr06:019642768 0 W/19642768-19642768 FN3970-S SNP A -> G AC=1;AN=168;BQB=0.859057;DP=1882;DP4=336,1389,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.149309;MQB=0.799824;MQSB=0.573387;RPB=0.89339;SGB=2.75988;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.6:19651057 chr06:019651057 0 W/19651057-19651057 FN2734-S SNP C -> T AC=2;AN=200;BQB=0.999598;DP=5091;DP4=2688,2072,48,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.0070713;MQB=7.26799e-32;MQSB=0.756454;RPB=0.754769;SGB=260.813;VDB=0.60171;EFF=INTRON(MODIFIER||||173|LOC_Os06g33780|protein_coding|CODING|LOC_Os06g33780.1|1|1) FN3819-S.SNP.6:19654302 chr06:019654302 0 W/19654302-19654302 FN3819-S SNP C -> G AC=1;AN=190;BQB=0.955702;DP=2703;DP4=1329,1290,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.65153e-09;MQSB=0.999731;RPB=0.105837;SGB=58.2031;VDB=0.408117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T11S|85|LOC_Os06g33790|protein_coding|CODING|LOC_Os06g33790.1|1|1) FN-171.SNP.6:19660724 chr06:019660724 0 W/19660724-19660724 FN-171 Single Base Substitution A-G INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3310-S.SNP.6:19665781 chr06:019665781 0 W/19665781-19665781 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.768517;DP=2621;DP4=1299,1219,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.80711e-09;MQSB=0.933753;RPB=0.600779;SGB=46.3132;VDB=0.112371;EFF=INTRON(MODIFIER||||420|LOC_Os06g33810|protein_coding|CODING|LOC_Os06g33810.1|2|1) FN2383.SNP.6:19670078 chr06:019670078 0 W/19670078-19670078 FN2383 SNP C -> A AC=1;AN=192;BQB=0.654804;DP=5018;DP4=2474,2283,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.14743e-08;MQSB=0.773132;RPB=0.729953;SGB=4.22611;VDB=0.948335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.6:19672475 chr06:019672475 0 W/19672475-19672475 FN2345 SNP T -> G AC=1;AN=192;BQB=0.810755;DP=4807;DP4=2489,2021,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.7832e-15;MQSB=0.791368;RPB=0.737452;SGB=26.127;VDB=0.730302;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.6:19675269 chr06:019675269 0 W/19675269-19675269 FN4069-S SNP G -> A AC=1;AN=182;BQB=0.799313;DP=2942;DP4=1393,1461,21,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.44294e-20;MQSB=0.864456;RPB=0.917381;SGB=123.399;VDB=0.612385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.6:19686118 chr06:019686118 0 W/19686118-19686118 FN1203-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-382.SNP.6:19687318 chr06:019687318 0 W/19687318-19687318 FN-382 Single Base Substitution C-T INTRON HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN1340-S.SNP.6:19691116 chr06:019691116 0 W/19691116-19691116 FN1340-S Single Base Substitution C-A INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1008-S.SNP.6:19692188 chr06:019692188 0 W/19692188-19692188 FN1008-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g33860 retrotransposon protein, putative, unclassified, expressed SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1477-S.SNP.6:19695267 chr06:019695267 0 W/19695267-19695267 FN1477-S Single Base Substitution C-G INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN3401-S.SNP.6:19710507 chr06:019710507 0 W/19710507-19710507 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.986874;DP=2747;DP4=1278,1412,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06474e-06;MQSB=0.999898;RPB=0.0452063;SGB=39.699;VDB=0.032944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.6:19715107 chr06:019715107 0 W/19715107-19715107 FN3906-S SNP G -> A AC=2;AN=158;BQB=0.99412;DP=2933;DP4=1549,1291,11,7;HOB=0.024996;ICB=0.493752;MQ=21;MQ0F=0.367883;MQB=0.588963;MQSB=0.383849;RPB=0.528722;SGB=73.2838;VDB=0.977864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A871T|2016|LOC_Os06g33890|protein_coding|CODING|LOC_Os06g33890.1|1|1) FN2279-S.SNP.6:19717550 chr06:019717550 0 W/19717550-19717550 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.116711;DP=5380;DP4=2684,2322,16,20;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0258364;MQB=0.0074293;MQSB=1.71355e-13;RPB=0.191714;SGB=-44.3547;VDB=0.798667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S1670F|2016|LOC_Os06g33890|protein_coding|CODING|LOC_Os06g33890.1|2|1) FN1505-S.SNP.6:19718481 chr06:019718481 0 W/19718481-19718481 FN1505-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3797-S.SNP.6:19726993 chr06:019726993 0 W/19726993-19726993 FN3797-S SNP G -> A AC=1;AN=190;BQB=0.981675;DP=2265;DP4=1023,1146,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.41624e-06;MQSB=0.999252;RPB=0.939371;SGB=44.5415;VDB=0.656818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.6:19730914 chr06:019730914 0 W/19730914-19730914 FN2464 SNP G -> A AC=1;AN=200;BQB=0.907731;DP=3976;DP4=1772,1860,4,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.14415e-05;MQSB=3.06851e-05;RPB=0.977828;SGB=49.6594;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.6:19732455 chr06:019732455 0 W/19732455-19732455 FN1325-S Single Base Substitution G-A INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2708-S.SNP.6:19732995 chr06:019732995 0 W/19732995-19732995 FN2708-S SNP T -> A AC=1;AN=200;BQB=0.689913;DP=5037;DP4=2521,2224,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60903e-15;MQSB=0.991496;RPB=0.711761;SGB=83.5316;VDB=0.318692;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.6:19735737 chr06:019735737 0 W/19735737-19735737 FN-240 Single Base Substitution G-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN-240.SNP.6:19735738 chr06:019735738 0 W/19735738-19735738 FN-240 Single Base Substitution A-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2740-S.SNP.6:19739126 chr06:019739126 0 W/19739126-19739126 FN2740-S SNP T -> G AC=1;AN=200;BQB=0.836729;DP=4938;DP4=2536,2178,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09214e-09;MQSB=0.896952;RPB=0.972092;SGB=29.4849;VDB=0.264024;EFF=INTRON(MODIFIER||||291|LOC_Os06g33930|protein_coding|CODING|LOC_Os06g33930.1|4|1) FN3347-S.SNP.6:19743051 chr06:019743051 0 W/19743051-19743051 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.244185;DP=3455;DP4=1402,1877,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000289436;MQB=4.50827e-07;MQSB=0.808347;RPB=0.91595;SGB=35.884;VDB=0.399314;EFF=INTERGENIC(MODIFIER||||||||||1) FN-251.SNP.6:19744190 chr06:019744190 0 W/19744190-19744190 FN-251 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN-251.SNP.6:19744191 chr06:019744191 0 W/19744191-19744191 FN-251 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN3366-S.SNP.6:19749740 chr06:019749740 0 W/19749740-19749740 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.997286;DP=3097;DP4=1576,1370,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.71329e-09;MQSB=0.776476;RPB=0.141954;SGB=42.7914;VDB=0.0327745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.6:19750704 chr06:019750704 0 W/19750704-19750704 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.792372;DP=2399;DP4=1215,989,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.86148e-08;MQSB=0.502383;RPB=0.966414;SGB=49.835;VDB=0.700088;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.6:19754419 chr06:019754419 0 W/19754419-19754419 FN747-S Single Base Substitution A-G INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN405-S.SNP.6:19758215 chr06:019758215 0 W/19758215-19758215 FN405-S Single Base Substitution G-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1761-S.SNP.6:19758230 chr06:019758230 0 W/19758230-19758230 FN1761-S SNP A -> G AC=1;AN=186;BQB=0.616185;DP=2885;DP4=1551,1310,8,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=7.47641e-06;MQSB=0.998136;RPB=0.434493;SGB=20.9896;VDB=0.180626;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.6:19770597 chr06:019770597 0 W/19770597-19770597 FN4208-S SNP G -> A AC=1;AN=170;BQB=0.697822;DP=2542;DP4=1307,1177,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0129819;MQB=0.00437944;MQSB=0.0306191;RPB=0.950829;SGB=34.5445;VDB=0.561963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.6:19778286 chr06:019778286 0 W/19778286-19778286 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.773254;DP=2126;DP4=759,1268,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0921919;MQB=0.686273;MQSB=0.0383348;RPB=0.861206;SGB=33.9591;VDB=0.676898;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.6:19780099 chr06:019780099 0 W/19780099-19780099 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.417802;DP=2922;DP4=1510,1322,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000494371;MQSB=0.996905;RPB=0.162276;SGB=21.6609;VDB=0.407048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.6:19781793 chr06:019781793 0 W/19781793-19781793 FN3294-S SNP G -> C AC=2;AN=184;BQB=0.967572;DP=3114;DP4=1521,1450,20,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.93525e-22;MQSB=0.840212;RPB=0.999746;SGB=83.798;VDB=0.463588;EFF=UTR_3_PRIME(MODIFIER||367||144|LOC_Os06g33970|protein_coding|CODING|LOC_Os06g33970.1|1|1) FN3857-S.SNP.6:19796805 chr06:019796805 0 W/19796805-19796805 FN3857-S SNP G -> C AC=1;AN=158;BQB=0.951137;DP=2318;DP4=1076,1168,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.13404e-06;MQSB=0.933714;RPB=0.286806;SGB=38.3284;VDB=0.567012;EFF=STOP_LOST(HIGH|MISSENSE|tGa/tCa|*101S|100|LOC_Os06g33990|protein_coding|CODING|LOC_Os06g33990.1|3|1) FN1281-S.SNP.6:19799323 chr06:019799323 0 W/19799323-19799323 FN1281-S Single Base Substitution T-C INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2222-S.SNP.6:19809475 chr06:019809475 0 W/19809475-19809475 FN2222-S SNP G -> A AC=1;AN=190;BQB=0.344081;DP=4903;DP4=2035,2496,4,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203957;MQB=1.19697e-09;MQSB=0.150558;RPB=0.868201;SGB=-39.4473;VDB=0.830066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.6:19810077 chr06:019810077 0 W/19810077-19810077 FN1122-S Single Base Substitution G-A INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN3697-S.SNP.6:19814192 chr06:019814192 0 W/19814192-19814192 FN3697-S SNP T -> A AC=1;AN=190;BQB=0.569415;DP=3390;DP4=1557,1531,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20463e-05;MQSB=0.99808;RPB=0.677628;SGB=28.7675;VDB=0.340796;EFF=INTRON(MODIFIER||||459|LOC_Os06g34020|protein_coding|CODING|LOC_Os06g34020.1|1|1) FN543-S.SNP.6:19822057 chr06:019822057 0 W/19822057-19822057 FN543-S Single Base Substitution A-C INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1688-S.SNP.6:19830610 chr06:019830610 0 W/19830610-19830610 FN1688-S SNP T -> A AC=2;AN=188;BQB=0.68029;DP=4172;DP4=2220,1902,25,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.68738e-19;MQSB=0.994097;RPB=0.329705;SGB=94.7451;VDB=0.285727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.6:19832868 chr06:019832868 0 W/19832868-19832868 FN3512-S SNP A -> T AC=2;AN=188;BQB=0.675943;DP=3025;DP4=1579,1301,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.76234e-15;MQSB=0.997051;RPB=0.690867;SGB=135.302;VDB=0.0147396;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.6:19836609 chr06:019836609 0 W/19836609-19836609 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN744-S.SNP.6:19836611 chr06:019836611 0 W/19836611-19836611 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN-113.SNP.6:19846646 chr06:019846646 0 W/19846646-19846646 FN-113 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g34090 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-262.SNP.6:19846646 chr06:019846646 0 W/19846646-19846646 FN-262 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g34090 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3782-S.SNP.6:19850157 chr06:019850157 0 W/19850157-19850157 FN3782-S SNP T -> A AC=1;AN=190;BQB=0.99829;DP=2270;DP4=1095,1034,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000440529;MQB=4.71469e-06;MQSB=0.642076;RPB=0.218488;SGB=25.439;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.6:19852834 chr06:019852834 0 W/19852834-19852834 FN1675-S SNP G -> A AC=1;AN=188;BQB=0.512407;DP=4275;DP4=2226,2018,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.19889e-11;MQSB=0.989234;RPB=0.112723;SGB=-9.56681;VDB=0.367377;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.6:19855806 chr06:019855806 0 W/19855806-19855806 FN4153-S SNP T -> C AC=1;AN=170;BQB=0.351158;DP=2333;DP4=1195,1104,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0681526;MQB=0.895179;MQSB=1.71022e-21;RPB=0.952048;SGB=24.5502;VDB=0.372756;EFF=INTRON(MODIFIER||||56|LOC_Os06g34100|protein_coding|CODING|LOC_Os06g34100.1|1|1) FN3311-S.SNP.6:19860051 chr06:019860051 0 W/19860051-19860051 FN3311-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1211-S.SNP.6:19864657 chr06:019864657 0 W/19864657-19864657 FN1211-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2219-S.SNP.6:19865710 chr06:019865710 0 W/19865710-19865710 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.862159;DP=4706;DP4=2301,2127,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.58258e-09;MQSB=0.947567;RPB=0.0687373;SGB=53.8699;VDB=0.125295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.6:19871696 chr06:019871696 0 W/19871696-19871696 FN3480-S SNP A -> G AC=1;AN=184;BQB=0.682086;DP=2649;DP4=1325,1229,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.83203e-07;MQSB=0.983132;RPB=0.753989;SGB=71.3514;VDB=0.99186;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.6:19875163 chr06:019875163 0 W/19875163-19875163 W591-4-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN3555-S.SNP.6:19877534 chr06:019877534 0 W/19877534-19877534 FN3555-S SNP G -> A AC=2;AN=188;BQB=0.501499;DP=2786;DP4=1711,980,21,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.20816e-16;MQSB=0.626098;RPB=0.979704;SGB=176.191;VDB=0.800473;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.6:19878671 chr06:019878671 0 W/19878671-19878671 FN4140-S SNP G -> A AC=2;AN=170;BQB=0.896805;DP=1717;DP4=1039,601,14,5;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.0163075;MQB=1.58401e-05;MQSB=1.51914e-11;RPB=0.95639;SGB=78.9707;VDB=0.643793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.6:19879906 chr06:019879906 0 W/19879906-19879906 FN2322 SNP T -> C AC=2;AN=192;BQB=0.297353;DP=4760;DP4=2055,2385,27,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.53339e-25;MQSB=0.394939;RPB=0.47119;SGB=57.4139;VDB=0.212885;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.6:19882063 chr06:019882063 0 W/19882063-19882063 FN2578-S SNP C -> A AC=1;AN=198;BQB=0.729974;DP=4128;DP4=1880,1983,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.24128e-06;MQSB=0.999655;RPB=0.769579;SGB=13.7737;VDB=0.302143;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.6:19892174 chr06:019892174 0 W/19892174-19892174 FN1270-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g34140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3712-S.SNP.6:19893950 chr06:019893950 0 W/19893950-19893950 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.686673;DP=2888;DP4=1476,1313,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000549858;MQSB=0.997519;RPB=0.993817;SGB=35.4339;VDB=0.818272;EFF=INTRON(MODIFIER||||687|LOC_Os06g34150|protein_coding|CODING|LOC_Os06g34150.1|4|1) FN3842-S.SNP.6:19896233 chr06:019896233 0 W/19896233-19896233 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.647062;DP=2642;DP4=1073,1442,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85355e-09;MQSB=0.567638;RPB=0.69789;SGB=62.7569;VDB=0.16909;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.6:19898757 chr06:019898757 0 W/19898757-19898757 FN2496 SNP A -> T AC=1;AN=200;BQB=0.811412;DP=4648;DP4=1905,2196,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.99883e-07;MQSB=0.064697;RPB=0.426243;SGB=-34.5259;VDB=0.779077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.6:19904829 chr06:019904829 0 W/19904829-19904829 FN3846-S SNP G -> A AC=2;AN=190;BQB=0.814662;DP=2755;DP4=1238,1400,22,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.15283e-17;MQSB=0.966657;RPB=0.959022;SGB=158.388;VDB=0.0726456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.6:19905567 chr06:019905567 0 W/19905567-19905567 FN2151-S SNP C -> A AC=1;AN=168;BQB=0.0254196;DP=3762;DP4=1656,2070,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.66348e-12;MQSB=0.999204;RPB=0.830777;SGB=-66.4989;VDB=0.600955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.6:19905570 chr06:019905570 0 W/19905570-19905570 FN2151-S SNP C -> T AC=1;AN=168;BQB=0.0210797;DP=3823;DP4=1691,2102,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.57459e-10;MQSB=0.999976;RPB=0.875327;SGB=8.48315;VDB=0.80953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.6:19909458 chr06:019909458 0 W/19909458-19909458 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.961005;DP=4550;DP4=2184,2120,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16332e-11;MQSB=0.807663;RPB=0.436091;SGB=37.1297;VDB=0.296277;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.6:19910565 chr06:019910565 0 W/19910565-19910565 FN1349-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN3656-S.SNP.6:19915688 chr06:019915688 0 W/19915688-19915688 FN3656-S SNP G -> A AC=1;AN=190;BQB=0.914646;DP=2808;DP4=1113,1555,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.63227e-09;MQSB=0.834915;RPB=0.954044;SGB=46.7622;VDB=0.983654;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.6:19918405 chr06:019918405 0 W/19918405-19918405 FN3858-S SNP T -> C AC=1;AN=158;BQB=0.891604;DP=2804;DP4=1629,1070,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.5666e-08;MQSB=0.874039;RPB=0.530473;SGB=47.0672;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.6:19919348 chr06:019919348 0 W/19919348-19919348 FN-83 Single Base Substitution C-T INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3937-S.SNP.6:19919977 chr06:019919977 0 W/19919977-19919977 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.353371;DP=2678;DP4=1298,1251,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000938642;MQSB=0.974757;RPB=0.998392;SGB=47.0672;VDB=0.686666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.6:19922563 chr06:019922563 0 W/19922563-19922563 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.188522;DP=3875;DP4=1899,1768,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.92586e-10;MQSB=0.851601;RPB=0.133304;SGB=54.5295;VDB=0.681698;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q76*|244|LOC_Os06g34200|protein_coding|CODING|LOC_Os06g34200.1|2|1) FN2788-S.SNP.6:19932311 chr06:019932311 0 W/19932311-19932311 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.977951;DP=3934;DP4=1807,1917,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.8522e-13;MQSB=0.999111;RPB=0.417876;SGB=20.5152;VDB=0.305906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.6:19933170 chr06:019933170 0 W/19933170-19933170 FN-174 Single Base Substitution C-G INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN_N1-130-1.SNP.6:19934133 chr06:019934133 0 W/19934133-19934133 FN_N1-130-1 Single Base Substitution T-C Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN526-S.SNP.6:19937215 chr06:019937215 0 W/19937215-19937215 FN526-S Single Base Substitution T-G INTRON HOMO SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN4153-S.SNP.6:19945342 chr06:019945342 0 W/19945342-19945342 FN4153-S SNP G -> T AC=1;AN=170;BQB=0.636769;DP=2504;DP4=1043,1390,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.68138e-07;MQSB=0.99849;RPB=0.942707;SGB=56.7575;VDB=0.220083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.6:19946846 chr06:019946846 0 W/19946846-19946846 FN1334-S Single Base Substitution G-T INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-53.SNP.6:19949404 chr06:019949404 0 W/19949404-19949404 FN-53 Single Base Substitution G-A INTRON HOMO SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1264-S.SNP.6:19953420 chr06:019953420 0 W/19953420-19953420 FN1264-S Single Base Substitution T-A INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3332-S.SNP.6:19962245 chr06:019962245 0 W/19962245-19962245 FN3332-S SNP G -> A AC=1;AN=184;BQB=0.382541;DP=2953;DP4=1370,1393,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09281e-06;MQSB=0.683533;RPB=0.395907;SGB=25.7969;VDB=0.757288;EFF=INTRON(MODIFIER||||1139|LOC_Os06g34320|protein_coding|CODING|LOC_Os06g34320.1|4|1) FN3556-S.SNP.6:19963564 chr06:019963564 0 W/19963564-19963564 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.757995;DP=3096;DP4=1536,1492,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.91129e-13;MQSB=0.518406;RPB=0.688463;SGB=98.9552;VDB=0.146979;EFF=INTRON(MODIFIER||||1139|LOC_Os06g34320|protein_coding|CODING|LOC_Os06g34320.1|3|1) FN3902-S.SNP.6:19965552 chr06:019965552 0 W/19965552-19965552 FN3902-S SNP G -> A AC=2;AN=158;BQB=0.970091;DP=2868;DP4=1374,1357,22,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.7183e-19;MQSB=0.696379;RPB=0.993323;SGB=138.826;VDB=0.021938;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V271|1139|LOC_Os06g34320|protein_coding|CODING|LOC_Os06g34320.1|2|1) FN3430-S.SNP.6:19972296 chr06:019972296 0 W/19972296-19972296 FN3430-S SNP C -> G AC=1;AN=184;BQB=0.748719;DP=2773;DP4=1297,1376,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.04288e-07;MQSB=0.995888;RPB=0.954307;SGB=-0.806606;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.6:19974944 chr06:019974944 0 W/19974944-19974944 FN4068-S SNP G -> A AC=1;AN=182;BQB=0.997569;DP=2495;DP4=1121,1293,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.71318e-08;MQSB=0.996265;RPB=0.999621;SGB=57.644;VDB=0.142558;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.6:19976643 chr06:019976643 0 W/19976643-19976643 FN654-S Single Base Substitution T-A INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN898-S.SNP.6:19982219 chr06:019982219 0 W/19982219-19982219 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1023-S.SNP.6:19985231 chr06:019985231 0 W/19985231-19985231 FN1023-S Single Base Substitution G-A INTERGENIC HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN463-S.SNP.6:19987057 chr06:019987057 0 W/19987057-19987057 FN463-S Single Base Substitution C-T INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2205-S.SNP.6:19993475 chr06:019993475 0 W/19993475-19993475 FN2205-S SNP T -> C AC=2;AN=190;BQB=0.889401;DP=3462;DP4=1677,1381,11,16;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00028885;MQB=2.9227e-08;MQSB=0.000290668;RPB=0.120292;SGB=54.3062;VDB=0.411635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.6:19994092 chr06:019994092 0 W/19994092-19994092 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.320381;DP=2643;DP4=1357,1150,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.22924e-05;MQSB=0.997158;RPB=0.938154;SGB=18.4463;VDB=0.406435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.6:19996769 chr06:019996769 0 W/19996769-19996769 FN3292-S SNP G -> T AC=1;AN=184;BQB=0.865632;DP=2806;DP4=1267,1434,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.28433e-11;MQSB=0.922715;RPB=0.928955;SGB=93.9603;VDB=0.578053;EFF=INTERGENIC(MODIFIER||||||||||1) FN-20.SNP.6:20001693 chr06:020001693 0 W/20001693-20001693 FN-20 Single Base Substitution T-A INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN2663-S.SNP.6:20008881 chr06:020008881 0 W/20008881-20008881 FN2663-S SNP C -> A AC=1;AN=200;BQB=0.932425;DP=5769;DP4=2849,2619,13,5;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.203675;MQB=0.822143;MQSB=0;RPB=0.549558;SGB=54.6902;VDB=0.796329;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C232F|409|LOC_Os06g34380|protein_coding|CODING|LOC_Os06g34380.1|1|1) FN503-S.SNP.6:20009880 chr06:020009880 0 W/20009880-20009880 FN503-S Single Base Substitution C-T INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN3698-S.SNP.6:20013936 chr06:020013936 0 W/20013936-20013936 FN3698-S SNP T -> A AC=1;AN=190;BQB=0.80893;DP=3379;DP4=1914,1322,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000142406;MQSB=0.871162;RPB=0.832713;SGB=25.439;VDB=0.272308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.6:20014917 chr06:020014917 0 W/20014917-20014917 FN2237-S SNP G -> A AC=1;AN=190;BQB=0.993418;DP=4799;DP4=2527,2018,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.34075e-08;MQSB=0.999863;RPB=0.984017;SGB=53.6492;VDB=0.0889066;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.6:20023441 chr06:020023441 0 W/20023441-20023441 FN772-S Single Base Substitution C-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN772-S.SNP.6:20023445 chr06:020023445 0 W/20023445-20023445 FN772-S Single Base Substitution G-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2338.SNP.6:20036183 chr06:020036183 0 W/20036183-20036183 FN2338 SNP T -> A AC=2;AN=192;BQB=0.656118;DP=4555;DP4=1860,2388,19,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.07374e-22;MQSB=0.968823;RPB=0.707724;SGB=87.8939;VDB=0.808682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I815F|1018|LOC_Os06g34440|protein_coding|CODING|LOC_Os06g34440.1|4|1) FN2575-S.SNP.6:20044181 chr06:020044181 0 W/20044181-20044181 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.996965;DP=4590;DP4=2096,2198,17,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28403e-21;MQSB=0.953409;RPB=0.933091;SGB=164.427;VDB=0.163449;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.6:20045526 chr06:020045526 0 W/20045526-20045526 FN239-S Single Base Substitution G-C INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3476-S.SNP.6:20046499 chr06:020046499 0 W/20046499-20046499 FN3476-S SNP T -> C AC=1;AN=184;BQB=0.844007;DP=2967;DP4=1690,1154,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.34705e-10;MQSB=0.987228;RPB=0.682237;SGB=33.3622;VDB=0.58927;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.6:20047106 chr06:020047106 0 W/20047106-20047106 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.662093;DP=2691;DP4=1412,1101,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.64434e-10;MQSB=0.999217;RPB=0.0693141;SGB=33.2965;VDB=0.0646657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.6:20053701 chr06:020053701 0 W/20053701-20053701 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.84888;DP=2167;DP4=1048,1047,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.46335e-11;MQSB=0.999438;RPB=0.842329;SGB=70.0854;VDB=0.370685;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.6:20053702 chr06:020053702 0 W/20053702-20053702 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.970634;DP=2164;DP4=1050,1047,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.37323e-11;MQSB=0.999994;RPB=0.377781;SGB=48.6486;VDB=0.0942306;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.6:20053703 chr06:020053703 0 W/20053703-20053703 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.907114;DP=2158;DP4=1044,1023,6,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.33491e-11;MQSB=0.998163;RPB=0.905576;SGB=55.5339;VDB=0.316384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.6:20063285 chr06:020063285 0 W/20063285-20063285 FN3501-S SNP C -> A AC=1;AN=188;BQB=0.988031;DP=2919;DP4=1393,1468,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.04116e-07;MQSB=0.973342;RPB=0.854674;SGB=32.441;VDB=0.967893;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.6:20065711 chr06:020065711 0 W/20065711-20065711 FN956-S Single Base Substitution T-G INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3514-S.SNP.6:20065797 chr06:020065797 0 W/20065797-20065797 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.910794;DP=2632;DP4=1159,1375,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57354e-05;MQSB=0.996842;RPB=0.845102;SGB=18.2682;VDB=0.0625989;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.6:20067146 chr06:020067146 0 W/20067146-20067146 FN2334 SNP G -> A AC=1;AN=192;BQB=0.659711;DP=4912;DP4=2427,2269,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.19143e-10;MQSB=0.852932;RPB=0.998401;SGB=57.6018;VDB=0.808656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.6:20084297 chr06:020084297 0 W/20084297-20084297 FN2130-S SNP C -> G AC=1;AN=168;BQB=0.00277746;DP=3229;DP4=1620,1572,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00371632;MQB=0.000869602;MQSB=0.599282;RPB=0.518624;SGB=-145.773;VDB=0.459449;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G82|929|LOC_Os06g34510|protein_coding|CODING|LOC_Os06g34510.1|3|1) FN1086-S.SNP.6:20086297 chr06:020086297 0 W/20086297-20086297 FN1086-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g34520 CAF1 family ribonuclease containing protein, putative, expressed SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2725-S.SNP.6:20088079 chr06:020088079 0 W/20088079-20088079 FN2725-S SNP C -> A AC=1;AN=200;BQB=0.995832;DP=4983;DP4=2508,2208,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.96164e-10;MQSB=0.990231;RPB=0.090673;SGB=34.6953;VDB=0.0576455;EFF=UTR_3_PRIME(MODIFIER||491||190|LOC_Os06g34530|protein_coding|CODING|LOC_Os06g34530.1|2|1) FN2377.SNP.6:20095804 chr06:020095804 0 W/20095804-20095804 FN2377 SNP C -> T AC=1;AN=192;BQB=0.586702;DP=4927;DP4=2382,2229,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.26811e-06;MQSB=0.954624;RPB=0.747039;SGB=44.6462;VDB=0.299352;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.6:20102273 chr06:020102273 0 W/20102273-20102273 FN4117-S SNP C -> T AC=2;AN=180;BQB=0.972163;DP=2813;DP4=1432,1288,20,13;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=4.27344e-18;MQSB=0.878889;RPB=0.313661;SGB=143.35;VDB=0.871272;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.6:20104567 chr06:020104567 0 W/20104567-20104567 FN576-S Single Base Substitution C-T INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. W276-2-1.SNP.6:20119368 chr06:020119368 0 W/20119368-20119368 W276-2-1 Single Base Substitution A-C INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3373-S.SNP.6:20120902 chr06:020120902 0 W/20120902-20120902 FN3373-S SNP T -> G AC=1;AN=184;BQB=0.944197;DP=2830;DP4=1224,1443,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.27096e-07;MQSB=0.0281464;RPB=0.900964;SGB=48.7425;VDB=0.0200128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.6:20121665 chr06:020121665 0 W/20121665-20121665 FN2648-S SNP A -> T AC=1;AN=200;BQB=0.999894;DP=4580;DP4=2120,2227,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87441e-13;MQSB=0.996356;RPB=0.999203;SGB=72.7161;VDB=0.924332;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F170I|215|LOC_Os06g34600|protein_coding|CODING|LOC_Os06g34600.1|2|1) FN1255-S.SNP.6:20121910 chr06:020121910 0 W/20121910-20121910 FN1255-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g34600 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2387.SNP.6:20124417 chr06:020124417 0 W/20124417-20124417 FN2387 SNP G -> A AC=1;AN=192;BQB=0.612455;DP=4890;DP4=2578,1987,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03417e-10;MQSB=0.990011;RPB=0.94455;SGB=10.4835;VDB=0.765338;EFF=INTRON(MODIFIER||||215|LOC_Os06g34600|protein_coding|CODING|LOC_Os06g34600.1|1|1) FN3371-S.SNP.6:20125094 chr06:020125094 0 W/20125094-20125094 FN3371-S SNP A -> G AC=1;AN=184;BQB=0.99989;DP=3112;DP4=1386,1559,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36377e-12;MQSB=0.963355;RPB=0.223898;SGB=-11.0615;VDB=0.24773;EFF=INTRON(MODIFIER||||215|LOC_Os06g34600|protein_coding|CODING|LOC_Os06g34600.1|1|1) FN-278.SNP.6:20136991 chr06:020136991 0 W/20136991-20136991 FN-278 Single Base Substitution G-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. W276-2-1.SNP.6:20144913 chr06:020144913 0 W/20144913-20144913 W276-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-164.SNP.6:20146627 chr06:020146627 0 W/20146627-20146627 FN-164 Single Base Substitution G-T INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN726-S.SNP.6:20151757 chr06:020151757 0 W/20151757-20151757 FN726-S Single Base Substitution G-A INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3485-S.SNP.6:20155724 chr06:020155724 0 W/20155724-20155724 FN3485-S SNP A -> G AC=1;AN=184;BQB=0.949476;DP=2422;DP4=1119,1185,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.36743e-08;MQSB=0.988465;RPB=0.784326;SGB=48.7425;VDB=0.881069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.6:20156686 chr06:020156686 0 W/20156686-20156686 FN2260-S SNP G -> T AC=2;AN=186;BQB=0.91755;DP=1199;DP4=674,312,9,2;HOB=0.0212741;ICB=0.494682;MQ=47;MQ0F=0;MQB=0.000212411;MQSB=0.000340459;RPB=0.975624;SGB=44.5415;VDB=0.386007;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.6:20158095 chr06:020158095 0 W/20158095-20158095 FN1009-S Single Base Substitution T-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3773-S.SNP.6:20161826 chr06:020161826 0 W/20161826-20161826 FN3773-S SNP T -> C AC=1;AN=190;BQB=0.999549;DP=2724;DP4=1435,1164,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.82333e-07;MQSB=0.997385;RPB=0.999713;SGB=36.1006;VDB=0.739426;EFF=INTRON(MODIFIER||||558|LOC_Os06g34690|protein_coding|CODING|LOC_Os06g34690.1|6|1) FN2376.SNP.6:20179934 chr06:020179934 0 W/20179934-20179934 FN2376 SNP G -> A AC=2;AN=192;BQB=0.161822;DP=4486;DP4=1837,2184,10,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000445831;MQB=7.16091e-12;MQSB=0.41572;RPB=0.992134;SGB=-7.43215;VDB=0.947238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.6:20183198 chr06:020183198 0 W/20183198-20183198 FN2630-S SNP T -> C AC=1;AN=200;BQB=0.903283;DP=4938;DP4=2608,2125,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.7642e-15;MQSB=0.988195;RPB=0.156051;SGB=104.921;VDB=0.11595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.6:20183597 chr06:020183597 0 W/20183597-20183597 FN2670-S SNP A -> T AC=1;AN=200;BQB=0.562325;DP=4287;DP4=1971,2108,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73627e-16;MQSB=0.660332;RPB=0.653024;SGB=27.1468;VDB=0.715161;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.6:20184463 chr06:020184463 0 W/20184463-20184463 FN488-S Single Base Substitution T-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN488-S.SNP.6:20184464 chr06:020184464 0 W/20184464-20184464 FN488-S Single Base Substitution T-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1480-S.SNP.6:20188135 chr06:020188135 0 W/20188135-20188135 FN1480-S Single Base Substitution A-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1184-S.SNP.6:20189927 chr06:020189927 0 W/20189927-20189927 FN1184-S Single Base Substitution G-C INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN-212.SNP.6:20193104 chr06:020193104 0 W/20193104-20193104 FN-212 Single Base Substitution A-T INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN710-S.SNP.6:20200554 chr06:020200554 0 W/20200554-20200554 FN710-S Single Base Substitution T-C INTERGENIC HOMO SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN2781-S.SNP.6:20203526 chr06:020203526 0 W/20203526-20203526 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.791086;DP=5252;DP4=3009,2014,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0487433;MQB=0.635556;MQSB=3.01419e-42;RPB=0.970113;SGB=63.0809;VDB=0.713554;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1792|1952|LOC_Os06g34760|protein_coding|CODING|LOC_Os06g34760.1|5|1) FN1409-S.SNP.6:20206618 chr06:020206618 0 W/20206618-20206618 FN1409-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-281.SNP.6:20206778 chr06:020206778 0 W/20206778-20206778 FN-281 Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1723-S.SNP.6:20206778 chr06:020206778 0 W/20206778-20206778 FN1723-S SNP C -> T AC=2;AN=188;BQB=0.973211;DP=1562;DP4=837,680,8,8;HOB=0.0210502;ICB=0.494738;MQ=25;MQ0F=0.00512164;MQB=0.672533;MQSB=2.60314e-36;RPB=0.710952;SGB=46.6141;VDB=0.683641;EFF=SPLICE_SITE_REGION(LOW||||1952|LOC_Os06g34760|protein_coding|CODING|LOC_Os06g34760.1|2|1),INTRON(MODIFIER||||1952|LOC_Os06g34760|protein_coding|CODING|LOC_Os06g34760.1|2|1) FN-112.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN-112 Single Base Substitution G-A INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN-315.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN-315 Single Base Substitution G-A INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-387.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN-387 Single Base Substitution G-A INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-66.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN-66 Single Base Substitution G-A INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1024-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN1024-S Single Base Substitution G-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1089-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN1089-S Single Base Substitution G-A INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1339-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN1339-S Single Base Substitution G-A INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2120-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN2120-S SNP G -> A AC=2;AN=168;BQB=0.454858;DP=3255;DP4=2057,1078,38,12;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00798771;MQB=1.30521e-11;MQSB=0.000830467;RPB=0.959758;SGB=-273.711;VDB=0.595819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN2658-S SNP G -> A AC=2;AN=200;BQB=0.497983;DP=4846;DP4=2394,2058,24,18;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000412712;MQB=4.26223e-19;MQSB=0.961472;RPB=0.722795;SGB=141.214;VDB=0.5508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.954735;DP=2813;DP4=1491,1200,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00213295;MQB=0.00536246;MQSB=0.00287014;RPB=0.959417;SGB=26.1347;VDB=0.891098;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN347-S Single Base Substitution G-A INTERGENIC HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3599-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN3599-S SNP G -> A AC=1;AN=188;BQB=0.772093;DP=2867;DP4=1614,1125,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00104639;MQB=5.93382e-09;MQSB=0.0108354;RPB=0.0701629;SGB=112.585;VDB=0.154904;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.994002;DP=2567;DP4=1450,972,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00038956;MQB=7.89267e-05;MQSB=0.00182186;RPB=0.821225;SGB=42.6978;VDB=0.991985;EFF=INTERGENIC(MODIFIER||||||||||1) FN696-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN696-S Single Base Substitution G-A INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN949-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN949-S Single Base Substitution G-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.6:20211010 chr06:020211010 0 W/20211010-20211010 FN_935-1 Single Base Substitution G-A HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN-346.SNP.6:20215430 chr06:020215430 0 W/20215430-20215430 FN-346 Single Base Substitution C-G INTRON HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN1619-S.SNP.6:20218978 chr06:020218978 0 W/20218978-20218978 FN1619-S Single Base Substitution A-C INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2658-S.SNP.6:20222556 chr06:020222556 0 W/20222556-20222556 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.497423;DP=4363;DP4=2158,1977,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42612e-12;MQSB=0.100226;RPB=0.991444;SGB=95.7111;VDB=0.652422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.6:20222800 chr06:020222800 0 W/20222800-20222800 FN2411 SNP C -> T AC=1;AN=200;BQB=0.145101;DP=4519;DP4=1976,2226,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53537e-07;MQSB=0.91734;RPB=0.67384;SGB=29.4849;VDB=0.4996;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.6:20228488 chr06:020228488 0 W/20228488-20228488 W502-3-4 Single Base Substitution C-T INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1000-S.SNP.6:20229434 chr06:020229434 0 W/20229434-20229434 FN1000-S Single Base Substitution C-T INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2329.SNP.6:20230138 chr06:020230138 0 W/20230138-20230138 FN2329 SNP A -> T AC=1;AN=192;BQB=0.394799;DP=4796;DP4=2298,2248,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.6782e-09;MQSB=0.783878;RPB=0.814452;SGB=-14.2043;VDB=0.976775;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.6:20243509 chr06:020243509 0 W/20243509-20243509 FN957-S Single Base Substitution C-T INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2162-S.SNP.6:20245428 chr06:020245428 0 W/20245428-20245428 FN2162-S SNP T -> C AC=2;AN=168;BQB=0.125368;DP=4044;DP4=1750,2235,20,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.76076e-19;MQSB=0.911539;RPB=0.37513;SGB=-3.30965;VDB=0.217342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.6:20248567 chr06:020248567 0 W/20248567-20248567 FN3386-S SNP G -> A AC=1;AN=184;BQB=0.67794;DP=2890;DP4=1321,1434,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50143e-06;MQSB=0.889284;RPB=0.421851;SGB=66.8296;VDB=0.0601212;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.6:20251092 chr06:020251092 0 W/20251092-20251092 FN3297-S SNP C -> T AC=2;AN=184;BQB=0.992044;DP=2914;DP4=1589,1221,13,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000343171;MQB=8.92657e-15;MQSB=0.733209;RPB=0.99695;SGB=107.526;VDB=0.158252;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.6:20251235 chr06:020251235 0 W/20251235-20251235 FN1158-S Single Base Substitution G-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN4143-S.SNP.6:20257432 chr06:020257432 0 W/20257432-20257432 FN4143-S SNP G -> T AC=1;AN=170;BQB=0.967974;DP=2193;DP4=1114,1004,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.47148e-10;MQSB=0.410837;RPB=0.961561;SGB=45.206;VDB=0.760113;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S65|147|LOC_Os06g34840|protein_coding|CODING|LOC_Os06g34840.1|1|1) FN-88.SNP.6:20260646 chr06:020260646 0 W/20260646-20260646 FN-88 Single Base Substitution A-C INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN551-S.SNP.6:20270511 chr06:020270511 0 W/20270511-20270511 FN551-S Single Base Substitution A-C INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN-169.SNP.6:20282442 chr06:020282442 0 W/20282442-20282442 FN-169 Single Base Substitution C-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3970-S.SNP.6:20284009 chr06:020284009 0 W/20284009-20284009 FN3970-S SNP C -> T AC=1;AN=168;BQB=0.953912;DP=2444;DP4=1230,1109,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51794e-08;MQSB=0.999106;RPB=0.852902;SGB=48.4712;VDB=0.94363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.6:20290371 chr06:020290371 0 W/20290371-20290371 FN2578-S SNP A -> G AC=1;AN=196;BQB=0.362251;DP=3881;DP4=1780,1837,9,9;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.46651e-10;MQSB=0.979773;RPB=0.996461;SGB=54.5295;VDB=0.463639;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.6:20292233 chr06:020292233 0 W/20292233-20292233 FN4258-S SNP G -> T AC=1;AN=170;BQB=0.713986;DP=2408;DP4=1124,1231,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.60286e-06;MQSB=0.987423;RPB=0.454697;SGB=43.4296;VDB=0.884455;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.6:20296464 chr06:020296464 0 W/20296464-20296464 FN855-S Single Base Substitution C-T INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN4312-S.SNP.6:20297410 chr06:020297410 0 W/20297410-20297410 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.992122;DP=2742;DP4=1279,1382,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.10133e-08;MQSB=0.909559;RPB=0.493506;SGB=38.3207;VDB=0.0631045;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.6:20299628 chr06:020299628 0 W/20299628-20299628 FN_772-3-1 Single Base Substitution T-G HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN875-S.SNP.6:20303048 chr06:020303048 0 W/20303048-20303048 FN875-S Single Base Substitution C-T INTRON HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1533-S.SNP.6:20303444 chr06:020303444 0 W/20303444-20303444 FN1533-S Single Base Substitution A-C SYNONYMOUS_CODING Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1570-S.SNP.6:20311286 chr06:020311286 0 W/20311286-20311286 FN1570-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3766-S.SNP.6:20315040 chr06:020315040 0 W/20315040-20315040 FN3766-S SNP G -> C AC=1;AN=190;BQB=0.18158;DP=3023;DP4=1475,1428,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.97203e-05;MQSB=0.960061;RPB=0.226345;SGB=2.55724;VDB=0.875655;EFF=INTRON(MODIFIER||||211|LOC_Os06g34930|protein_coding|CODING|LOC_Os06g34930.1|1|1) FN1197-S.SNP.6:20320164 chr06:020320164 0 W/20320164-20320164 FN1197-S Single Base Substitution T-C INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3855-S.SNP.6:20321631 chr06:020321631 0 W/20321631-20321631 FN3855-S SNP G -> A AC=1;AN=158;BQB=0.865117;DP=3631;DP4=855,2568,9,23;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.00137703;MQB=0.999939;MQSB=0.0738332;RPB=0.701136;SGB=98.093;VDB=0.654862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.6:20328195 chr06:020328195 0 W/20328195-20328195 FN2408 SNP G -> A AC=1;AN=200;BQB=0.95084;DP=4953;DP4=2114,2153,10,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00161518;MQB=1.42739e-06;MQSB=4.29377e-06;RPB=0.99964;SGB=-13.7154;VDB=0.850895;EFF=INTRON(MODIFIER||||420|LOC_Os06g34960|protein_coding|CODING|LOC_Os06g34960.1|6|1) FN2484.SNP.6:20331330 chr06:020331330 0 W/20331330-20331330 FN2484 SNP A -> C AC=1;AN=200;BQB=0.563089;DP=4386;DP4=2220,1895,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.59996e-10;MQSB=0.986036;RPB=0.9257;SGB=68.0801;VDB=0.438798;EFF=INTRON(MODIFIER||||420|LOC_Os06g34960|protein_coding|CODING|LOC_Os06g34960.1|3|1) FN2573-S.SNP.6:20342837 chr06:020342837 0 W/20342837-20342837 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.744885;DP=4139;DP4=2041,1807,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.53014e-07;MQSB=0.772233;RPB=0.683101;SGB=29.3637;VDB=0.39833;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.6:20343615 chr06:020343615 0 W/20343615-20343615 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3661-S.SNP.6:20346785 chr06:020346785 0 W/20346785-20346785 FN3661-S SNP G -> C AC=1;AN=190;BQB=0.966039;DP=2577;DP4=1212,1258,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0816e-07;MQSB=0.603691;RPB=0.944615;SGB=15.9981;VDB=0.44694;EFF=INTRON(MODIFIER||||217|LOC_Os06g34980|protein_coding|CODING|LOC_Os06g34980.1|2|1) FN2651-S.SNP.6:20362120 chr06:020362120 0 W/20362120-20362120 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.546277;DP=4607;DP4=2203,2154,13,17;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000217061;MQB=1.56428e-07;MQSB=0.634742;RPB=0.453442;SGB=132.552;VDB=0.0105593;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T41|241|LOC_Os06g35010|protein_coding|CODING|LOC_Os06g35010.1|1|1) FN550-S.SNP.6:20362835 chr06:020362835 0 W/20362835-20362835 FN550-S Single Base Substitution C-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN4134-S.SNP.6:20376301 chr06:020376301 0 W/20376301-20376301 FN4134-S SNP G -> T AC=2;AN=182;BQB=0.130307;DP=2157;DP4=791,1212,20,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.13432e-16;MQSB=0.541182;RPB=0.956886;SGB=-42.7091;VDB=0.62965;EFF=INTRON(MODIFIER||||286|LOC_Os06g35030|protein_coding|CODING|LOC_Os06g35030.1|3|1),INTRON(MODIFIER||||362|LOC_Os06g35030|protein_coding|CODING|LOC_Os06g35030.3|3|1) FN3425-S.SNP.6:20388376 chr06:020388376 0 W/20388376-20388376 FN3425-S SNP T -> C AC=1;AN=184;BQB=0.931891;DP=3020;DP4=1542,1369,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00728477;MQB=0.0916918;MQSB=0.954439;RPB=0.877263;SGB=39.699;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.6:20394439 chr06:020394439 0 W/20394439-20394439 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.735985;DP=5207;DP4=2355,2595,20,9;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0833493;MQB=0.839634;MQSB=0.0029968;RPB=0.0507839;SGB=94.3471;VDB=0.46923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H1614R|1694|LOC_Os06g35040|protein_coding|CODING|LOC_Os06g35040.1|3|1) FN439-S.SNP.6:20396927 chr06:020396927 0 W/20396927-20396927 FN439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN3775-S.SNP.6:20398595 chr06:020398595 0 W/20398595-20398595 FN3775-S SNP G -> T AC=1;AN=190;BQB=0.95646;DP=2739;DP4=1315,1349,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38168e-08;MQSB=0.153688;RPB=0.967651;SGB=58.2031;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.6:20406028 chr06:020406028 0 W/20406028-20406028 FN601-S Single Base Substitution T-A INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1184-S.SNP.6:20408606 chr06:020408606 0 W/20408606-20408606 FN1184-S Single Base Substitution C-T INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN978-S.SNP.6:20411993 chr06:020411993 0 W/20411993-20411993 FN978-S Single Base Substitution T-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1655-S.SNP.6:20424863 chr06:020424863 0 W/20424863-20424863 FN1655-S Single Base Substitution C-A INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN687-S.SNP.6:20428124 chr06:020428124 0 W/20428124-20428124 FN687-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g35100 expressed protein SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3786-S.SNP.6:20431286 chr06:020431286 0 W/20431286-20431286 FN3786-S SNP G -> A AC=1;AN=190;BQB=0.999546;DP=2808;DP4=1176,1519,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.80369e-09;MQSB=0.684043;RPB=0.903088;SGB=39.6545;VDB=0.268133;EFF=INTRON(MODIFIER||||427|LOC_Os06g35110|protein_coding|CODING|LOC_Os06g35110.1|1|1) FN3786-S.SNP.6:20431287 chr06:020431287 0 W/20431287-20431287 FN3786-S SNP G -> A AC=1;AN=190;BQB=0.384435;DP=2793;DP4=1176,1526,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.35257e-09;MQSB=0.633811;RPB=0.793991;SGB=43.2083;VDB=0.151081;EFF=INTRON(MODIFIER||||427|LOC_Os06g35110|protein_coding|CODING|LOC_Os06g35110.1|1|1) FN4176-S.SNP.6:20432795 chr06:020432795 0 W/20432795-20432795 FN4176-S SNP G -> A AC=1;AN=170;BQB=0.972078;DP=2674;DP4=1319,1286,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.9587e-08;MQSB=0.887995;RPB=0.714351;SGB=31.4354;VDB=0.804268;EFF=INTRON(MODIFIER||||584|LOC_Os06g35120|protein_coding|CODING|LOC_Os06g35120.1|1|1) FN2797-S.SNP.6:20438305 chr06:020438305 0 W/20438305-20438305 FN2797-S SNP A -> G AC=1;AN=198;BQB=0.994602;DP=4265;DP4=2005,1950,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0389e-09;MQSB=0.754434;RPB=0.889179;SGB=63.3342;VDB=0.185215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.6:20441743 chr06:020441743 0 W/20441743-20441743 FN2086-S SNP T -> C AC=2;AN=168;BQB=0.942867;DP=3782;DP4=2092,1626,30,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.06054e-29;MQSB=0.537839;RPB=0.976202;SGB=54.2693;VDB=0.664762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.6:20442739 chr06:020442739 0 W/20442739-20442739 FN1647-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g35130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1279-S.SNP.6:20443300 chr06:020443300 0 W/20443300-20443300 FN1279-S Single Base Substitution G-A STOP_GAINED HET LOC_Os06g35130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2629-S.SNP.6:20444498 chr06:020444498 0 W/20444498-20444498 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.237205;DP=4572;DP4=2154,2094,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.71193e-12;MQSB=0.960704;RPB=0.976323;SGB=19.1209;VDB=0.611622;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.6:20444498 chr06:020444498 0 W/20444498-20444498 FN4120-S SNP T -> C AC=1;AN=182;BQB=0.97648;DP=2688;DP4=1178,1342,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.35256e-09;MQSB=0.999717;RPB=0.235046;SGB=46.1603;VDB=0.351783;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.6:20445665 chr06:020445665 0 W/20445665-20445665 FN-133 Single Base Substitution A-T INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN2462.SNP.6:20446344 chr06:020446344 0 W/20446344-20446344 FN2462 SNP T -> C AC=1;AN=200;BQB=0.993096;DP=4587;DP4=2148,2195,14,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=7.31623e-06;MQSB=0.179766;RPB=0.926827;SGB=69.1109;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.6:20446664 chr06:020446664 0 W/20446664-20446664 FN670-S Single Base Substitution T-C INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1708-S.SNP.6:20446734 chr06:020446734 0 W/20446734-20446734 FN1708-S SNP C -> A AC=1;AN=188;BQB=0.204504;DP=2439;DP4=720,1666,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10573e-06;MQSB=0.929252;RPB=0.867418;SGB=10.1681;VDB=0.442848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.6:20447878 chr06:020447878 0 W/20447878-20447878 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.59058;DP=4128;DP4=1854,1964,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.76811e-06;MQSB=0.786329;RPB=0.994458;SGB=13.7737;VDB=0.558524;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.6:20449133 chr06:020449133 0 W/20449133-20449133 FN930-S Single Base Substitution G-T INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1060-S.SNP.6:20452463 chr06:020452463 0 W/20452463-20452463 FN1060-S Single Base Substitution C-G INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1420-S.SNP.6:20452563 chr06:020452563 0 W/20452563-20452563 FN1420-S Single Base Substitution A-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN-187.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN-187 Single Base Substitution G-A INTERGENIC HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-274.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN1084-S.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN1084-S Single Base Substitution G-A INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2582-S.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN2582-S SNP G -> A AC=2;AN=198;BQB=0.464463;DP=4452;DP4=2080,2145,16,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.58599e-16;MQSB=0.945844;RPB=0.976504;SGB=113.881;VDB=0.678147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.847928;DP=2903;DP4=1221,1577,3,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03948e-11;MQSB=0.993726;RPB=0.822283;SGB=31.3213;VDB=0.518556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.6:20454048 chr06:020454048 0 W/20454048-20454048 FN3893-S SNP G -> A AC=2;AN=158;BQB=0.949164;DP=2312;DP4=1009,1189,12,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.67845e-18;MQSB=0.991519;RPB=0.922635;SGB=138.826;VDB=0.464564;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.6:20455286 chr06:020455286 0 W/20455286-20455286 FN1582-S Single Base Substitution G-T STOP_GAINED HET LOC_Os06g35140 MYB family transcription factor, putative, expressed SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN518-S.SNP.6:20458378 chr06:020458378 0 W/20458378-20458378 FN518-S Single Base Substitution A-C INTERGENIC HOMO SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN933-S.SNP.6:20459619 chr06:020459619 0 W/20459619-20459619 FN933-S Single Base Substitution C-T INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN4188-S.SNP.6:20464777 chr06:020464777 0 W/20464777-20464777 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.851542;DP=2792;DP4=1153,1513,13,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.84144e-13;MQSB=0.949958;RPB=0.708685;SGB=101.184;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.6:20471084 chr06:020471084 0 W/20471084-20471084 FN1538-S Single Base Substitution T-C INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN-28.SNP.6:20471221 chr06:020471221 0 W/20471221-20471221 FN-28 Single Base Substitution T-A INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN1414-S.SNP.6:20471221 chr06:020471221 0 W/20471221-20471221 FN1414-S Single Base Substitution T-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN738-S.SNP.6:20471221 chr06:020471221 0 W/20471221-20471221 FN738-S Single Base Substitution T-A INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN1250-S.SNP.6:20478660 chr06:020478660 0 W/20478660-20478660 FN1250-S Single Base Substitution A-G INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1234-S.SNP.6:20480431 chr06:020480431 0 W/20480431-20480431 FN1234-S Single Base Substitution A-C INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1722-S.SNP.6:20484510 chr06:020484510 0 W/20484510-20484510 FN1722-S SNP G -> T AC=1;AN=188;BQB=0.75989;DP=2499;DP4=913,1547,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16754e-08;MQSB=0.954536;RPB=0.808927;SGB=36.2493;VDB=0.21378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1722-S.SNP.6:20484512 chr06:020484512 0 W/20484512-20484512 FN1722-S SNP C -> G AC=1;AN=188;BQB=0.194685;DP=2465;DP4=902,1520,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.13867e-08;MQSB=0.934747;RPB=0.251161;SGB=-38.7347;VDB=0.0695224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.6:20497313 chr06:020497313 0 W/20497313-20497313 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.99794;DP=2395;DP4=1042,1294,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03433e-10;MQSB=0.997977;RPB=0.853149;SGB=53.7007;VDB=0.614059;EFF=UTR_5_PRIME(MODIFIER||489||107|LOC_Os06g35165|protein_coding|CODING|LOC_Os06g35165.1|1|1) FN-52.SNP.6:20507029 chr06:020507029 0 W/20507029-20507029 FN-52 Single Base Substitution C-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN1573-S.SNP.6:20507492 chr06:020507492 0 W/20507492-20507492 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2220-S.SNP.6:20507710 chr06:020507710 0 W/20507710-20507710 FN2220-S SNP C -> A AC=1;AN=190;BQB=0.957432;DP=4800;DP4=2223,2288,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27407e-17;MQSB=0.625261;RPB=0.613004;SGB=89.4087;VDB=0.635261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.6:20514146 chr06:020514146 0 W/20514146-20514146 FN3468-S SNP C -> A AC=1;AN=184;BQB=0.969321;DP=2866;DP4=1338,1380,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=5.6557e-09;MQSB=0.302363;RPB=0.966809;SGB=98.4821;VDB=0.539431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A430E|786|LOC_Os06g35180|protein_coding|CODING|LOC_Os06g35180.1|4|1) FN1243-S.SNP.6:20519318 chr06:020519318 0 W/20519318-20519318 FN1243-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1436-S.SNP.6:20522992 chr06:020522992 0 W/20522992-20522992 FN1436-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN451-S.SNP.6:20524378 chr06:020524378 0 W/20524378-20524378 FN451-S Single Base Substitution C-A STOP_GAINED HET LOC_Os06g35200 receptor-like kinase, putative, expressed SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-111.SNP.6:20525623 chr06:020525623 0 W/20525623-20525623 FN-111 Single Base Substitution T-A INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1638-S.SNP.6:20533964 chr06:020533964 0 W/20533964-20533964 FN1638-S Single Base Substitution A-G INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN4314-S.SNP.6:20542814 chr06:020542814 0 W/20542814-20542814 FN4314-S SNP C -> T AC=1;AN=170;BQB=0.999548;DP=2508;DP4=1088,1361,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0;MQB=0.00070722;MQSB=0.65124;RPB=0.982389;SGB=70.0854;VDB=0.910077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.6:20543258 chr06:020543258 0 W/20543258-20543258 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1268-S.SNP.6:20544422 chr06:020544422 0 W/20544422-20544422 FN1268-S Single Base Substitution T-C INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1576-S.SNP.6:20545670 chr06:020545670 0 W/20545670-20545670 FN1576-S Single Base Substitution G-A INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1367-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN1367-S Single Base Substitution G-A INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1537-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN1537-S Single Base Substitution G-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2472.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN2472 SNP G -> A AC=2;AN=200;BQB=0.924329;DP=4206;DP4=2134,1762,25,23;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.00475511;MQB=0.259367;MQSB=1.40876e-26;RPB=0.70939;SGB=162.845;VDB=0.196501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN2538-S SNP G -> A AC=2;AN=198;BQB=0.838654;DP=3808;DP4=1875,1673,19,17;HOB=0.019998;ICB=0.495001;MQ=35;MQ0F=0.00315126;MQB=0.404998;MQSB=1.7013e-16;RPB=0.299068;SGB=38.0616;VDB=0.230632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN3442-S SNP G -> A AC=2;AN=184;BQB=0.595389;DP=2345;DP4=1448,825,12,5;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.00426439;MQB=0.689636;MQSB=8.43724e-26;RPB=0.289103;SGB=71.3514;VDB=0.0383152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN3541-S SNP G -> A AC=2;AN=188;BQB=0.992645;DP=2402;DP4=1487,855,12,5;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0062448;MQB=0.658256;MQSB=4.06823e-23;RPB=0.462194;SGB=71.6954;VDB=0.157167;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN516-S Single Base Substitution G-A INTERGENIC HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN859-S.SNP.6:20546556 chr06:020546556 0 W/20546556-20546556 FN859-S Single Base Substitution G-A INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3829-S.SNP.6:20550054 chr06:020550054 0 W/20550054-20550054 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.929252;DP=2466;DP4=1192,1217,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.014193;MQB=0.000888917;MQSB=0.899911;RPB=0.324816;SGB=71.8647;VDB=0.0194374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V726I|1373|LOC_Os06g35220|protein_coding|CODING|LOC_Os06g35220.1|5|1) FN3565-S.SNP.6:20555727 chr06:020555727 0 W/20555727-20555727 FN3565-S SNP A -> T AC=2;AN=188;BQB=0.998286;DP=2802;DP4=1385,1297,14,17;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00249822;MQB=0.00034278;MQSB=2.83109e-05;RPB=0.999954;SGB=99.7635;VDB=0.958892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.6:20564015 chr06:020564015 0 W/20564015-20564015 FN1686-S SNP G -> A AC=2;AN=188;BQB=0.773956;DP=2481;DP4=1157,1278,18,11;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00120919;MQB=0.00727295;MQSB=0.000342977;RPB=0.5088;SGB=25.601;VDB=0.0884924;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A113V|743|LOC_Os06g35270|protein_coding|CODING|LOC_Os06g35270.1|2|1) FN-94.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN-94 Single Base Substitution G-A INTERGENIC HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1039-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN1039-S Single Base Substitution G-A INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1131-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN1131-S Single Base Substitution G-A INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1330-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN1330-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1460-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN1460-S Single Base Substitution G-A INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1512-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN1512-S Single Base Substitution G-A INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2169-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN2169-S SNP G -> A AC=2;AN=168;BQB=0.0183896;DP=3347;DP4=1415,1882,13,21;HOB=0.0235261;ICB=0.494119;MQ=35;MQ0F=0.00298775;MQB=0.0436159;MQSB=7.01409e-08;RPB=0.951351;SGB=-162.179;VDB=0.113167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN2216-S SNP G -> A AC=2;AN=190;BQB=0.644739;DP=3753;DP4=1800,1625,17,17;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.0039968;MQB=0.0146805;MQSB=0.000917442;RPB=0.407291;SGB=-43.4624;VDB=0.00146937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN2437 SNP G -> A AC=1;AN=200;BQB=0.815512;DP=3400;DP4=1665,1492,12,9;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.00411765;MQB=0.0758467;MQSB=0.00277036;RPB=0.937753;SGB=39.9056;VDB=6.88514e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN267-S Single Base Substitution G-A INTERGENIC HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3727-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN3727-S SNP G -> A AC=1;AN=190;BQB=0.280839;DP=2193;DP4=998,1113,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.00273598;MQB=0.823647;MQSB=0.573097;RPB=0.407184;SGB=21.8853;VDB=0.27856;EFF=INTERGENIC(MODIFIER||||||||||1) FN444-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN444-S Single Base Substitution G-A INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN504-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN504-S Single Base Substitution G-A INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN625-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN625-S Single Base Substitution G-A INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN772-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN772-S Single Base Substitution G-A INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN952-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN952-S Single Base Substitution G-A INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN974-S.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN974-S Single Base Substitution G-A INTERGENIC HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN_N1-151-7.SNP.6:20565593 chr06:020565593 0 W/20565593-20565593 FN_N1-151-7 Single Base Substitution G-A Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1093-S.SNP.6:20569481 chr06:020569481 0 W/20569481-20569481 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN497-S.SNP.6:20574792 chr06:020574792 0 W/20574792-20574792 FN497-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g35280 retrotransposon protein, putative, Ty1-copia subclass SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1505-S.SNP.6:20593752 chr06:020593752 0 W/20593752-20593752 FN1505-S Single Base Substitution G-T INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2090-S.SNP.6:20607861 chr06:020607861 0 W/20607861-20607861 FN2090-S SNP G -> A AC=1;AN=168;BQB=0.0299666;DP=5341;DP4=2724,2549,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00112339;MQB=4.57498e-05;MQSB=7.41684e-08;RPB=0.821046;SGB=-205.613;VDB=0.541514;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.6:20615428 chr06:020615428 0 W/20615428-20615428 FN948-S Single Base Substitution G-C INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2468.SNP.6:20621980 chr06:020621980 0 W/20621980-20621980 FN2468 SNP G -> T AC=1;AN=200;BQB=0.538029;DP=6500;DP4=3318,2838,11,14;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.314;MQB=0.895027;MQSB=1.81773e-06;RPB=0.775714;SGB=-8.87404;VDB=0.547873;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S239Y|412|LOC_Os06g35370|protein_coding|CODING|LOC_Os06g35370.1|2|1) FN2083-S.SNP.6:20624215 chr06:020624215 0 W/20624215-20624215 FN2083-S SNP G -> T AC=1;AN=168;BQB=0.541887;DP=3034;DP4=1486,1510,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000988794;MQB=1.1381e-05;MQSB=0.979457;RPB=0.709033;SGB=-11.0644;VDB=0.0583747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.6:20625197 chr06:020625197 0 W/20625197-20625197 FN2239-S SNP C -> T AC=2;AN=190;BQB=0.804146;DP=4375;DP4=2078,2016,11,26;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0016;MQB=2.27062e-09;MQSB=0.559634;RPB=0.930144;SGB=79.845;VDB=0.998244;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C103|696|LOC_Os06g35380|protein_coding|CODING|LOC_Os06g35380.1|1|1) 705-1.SNP.6:20626839 chr06:020626839 0 W/20626839-20626839 705-1 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.6:20626839 chr06:020626839 0 W/20626839-20626839 705-2 Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-3.SNP.6:20626839 chr06:020626839 0 W/20626839-20626839 705-3 Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. FN1134-S.SNP.6:20627408 chr06:020627408 0 W/20627408-20627408 FN1134-S Single Base Substitution G-T INTERGENIC HET SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN921-S.SNP.6:20631746 chr06:020631746 0 W/20631746-20631746 FN921-S Single Base Substitution G-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN2226-S.SNP.6:20639543 chr06:020639543 0 W/20639543-20639543 FN2226-S SNP G -> A AC=2;AN=190;BQB=0.846695;DP=4902;DP4=2171,2335,17,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000203998;MQB=2.52323e-19;MQSB=0.190327;RPB=0.994289;SGB=-0.482811;VDB=0.992;EFF=UTR_5_PRIME(MODIFIER||439||603|LOC_Os06g35410|protein_coding|CODING|LOC_Os06g35410.1|1|1) FN936-S.SNP.6:20639543 chr06:020639543 0 W/20639543-20639543 FN936-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3855-S.SNP.6:20641237 chr06:020641237 0 W/20641237-20641237 FN3855-S SNP T -> C AC=1;AN=158;BQB=0.407943;DP=2460;DP4=1244,1136,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.0629724;MQSB=0.996895;RPB=0.588948;SGB=16.7104;VDB=0.162805;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.6:20645080 chr06:020645080 0 W/20645080-20645080 FN_815-4-1 Single Base Substitution T-G HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3934-S.SNP.6:20666886 chr06:020666886 0 W/20666886-20666886 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.98947;DP=2602;DP4=1248,1264,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.86972e-07;MQSB=0.990817;RPB=0.827584;SGB=51.4366;VDB=0.500601;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y113|417|LOC_Os06g35470|protein_coding|CODING|LOC_Os06g35470.1|1|1) FN4071-S.SNP.6:20671857 chr06:020671857 0 W/20671857-20671857 FN4071-S SNP A -> G AC=1;AN=182;BQB=0.89803;DP=2567;DP4=1274,1200,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.34517e-08;MQSB=0.999902;RPB=0.725302;SGB=42.6494;VDB=0.181412;EFF=INTRON(MODIFIER||||417|LOC_Os06g35470|protein_coding|CODING|LOC_Os06g35470.1|8|1) FN-126.SNP.6:20673434 chr06:020673434 0 W/20673434-20673434 FN-126 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1279-S.SNP.6:20674187 chr06:020674187 0 W/20674187-20674187 FN1279-S Single Base Substitution T-C INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3360-S.SNP.6:20678374 chr06:020678374 0 W/20678374-20678374 FN3360-S SNP G -> T AC=1;AN=184;BQB=0.491641;DP=2860;DP4=1413,1331,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000345893;MQSB=0.991814;RPB=0.163828;SGB=28.7043;VDB=0.0825415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.6:20681932 chr06:020681932 0 W/20681932-20681932 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.739524;DP=5137;DP4=2342,2634,8,12;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.0100993;MQSB=0.046964;RPB=0.957949;SGB=61.9006;VDB=0.567935;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.6:20688497 chr06:020688497 0 W/20688497-20688497 FN4074-S SNP G -> A AC=2;AN=182;BQB=0.951832;DP=3065;DP4=1586,1391,12,7;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=1.11692e-07;MQSB=6.26752e-06;RPB=0.921529;SGB=80.1982;VDB=0.534877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.6:20688989 chr06:020688989 0 W/20688989-20688989 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.991312;DP=2550;DP4=1187,1234,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=4.5472e-08;MQSB=0.267154;RPB=0.877672;SGB=90.0802;VDB=0.890731;EFF=INTRON(MODIFIER||||326|LOC_Os06g35490|protein_coding|CODING|LOC_Os06g35490.1|5|1) FN3701-S.SNP.6:20689212 chr06:020689212 0 W/20689212-20689212 FN3701-S SNP A -> G AC=1;AN=190;BQB=0.988342;DP=2950;DP4=1532,1253,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.80583e-07;MQSB=0.3432;RPB=0.735312;SGB=32.5467;VDB=0.400793;EFF=INTRON(MODIFIER||||326|LOC_Os06g35490|protein_coding|CODING|LOC_Os06g35490.1|5|1) FN2353.SNP.6:20690471 chr06:020690471 0 W/20690471-20690471 FN2353 SNP T -> G AC=1;AN=192;BQB=0.783307;DP=5030;DP4=2397,2295,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=2.3135e-06;MQSB=0.752875;RPB=0.976769;SGB=-38.3774;VDB=0.378637;EFF=SPLICE_SITE_REGION(LOW||||326|LOC_Os06g35490|protein_coding|CODING|LOC_Os06g35490.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|Agg/Cgg|R325|326|LOC_Os06g35490|protein_coding|CODING|LOC_Os06g35490.1|4|1) FN409-S.SNP.6:20692121 chr06:020692121 0 W/20692121-20692121 FN409-S Single Base Substitution G-C INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN_827-1.SNP.6:20711478 chr06:020711478 0 W/20711478-20711478 FN_827-1 Single Base Substitution A-G Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2080-S.SNP.6:20714236 chr06:020714236 0 W/20714236-20714236 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.750884;DP=1952;DP4=918,952,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.110369;MQSB=0.445376;RPB=0.948814;SGB=-4.39415;VDB=0.935066;EFF=UTR_5_PRIME(MODIFIER||845||128|LOC_Os06g35524|protein_coding|CODING|LOC_Os06g35524.1|1|1) FN3883-S.SNP.6:20718241 chr06:020718241 0 W/20718241-20718241 FN3883-S SNP G -> A AC=2;AN=158;BQB=0.87027;DP=2865;DP4=1487,1243,12,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.25847e-12;MQSB=0.80148;RPB=0.565177;SGB=116.978;VDB=0.276672;EFF=INTRON(MODIFIER||||403|LOC_Os06g35530|protein_coding|CODING|LOC_Os06g35530.1|1|1) FN_N1-169-1.SNP.6:20728362 chr06:020728362 0 W/20728362-20728362 FN_N1-169-1 Single Base Substitution G-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN-150.SNP.6:20732496 chr06:020732496 0 W/20732496-20732496 FN-150 Single Base Substitution A-G INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3481-S.SNP.6:20744651 chr06:020744651 0 W/20744651-20744651 FN3481-S SNP G -> A AC=1;AN=184;BQB=0.986106;DP=3663;DP4=1750,1824,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.01441e-05;MQSB=0.000279306;RPB=0.989694;SGB=53.2642;VDB=0.95043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R16W|1935|LOC_Os06g35550|protein_coding|CODING|LOC_Os06g35550.1|1|1) FN3993-S.SNP.6:20769125 chr06:020769125 0 W/20769125-20769125 FN3993-S SNP G -> T AC=1;AN=168;BQB=0.955334;DP=3916;DP4=2063,1730,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.57264e-09;MQSB=0.946856;RPB=0.915764;SGB=45.0404;VDB=0.536094;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T183N|531|LOC_Os06g35590|protein_coding|CODING|LOC_Os06g35590.1|1|1) FN467-S.SNP.6:20780961 chr06:020780961 0 W/20780961-20780961 FN467-S Single Base Substitution T-C INTERGENIC HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1204-S.SNP.6:20784401 chr06:020784401 0 W/20784401-20784401 FN1204-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN4312-S.SNP.6:20790334 chr06:020790334 0 W/20790334-20790334 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.923742;DP=2234;DP4=1095,1076,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000223883;MQSB=0.99999;RPB=0.0422765;SGB=30.1021;VDB=0.146847;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.6:20791057 chr06:020791057 0 W/20791057-20791057 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.842726;DP=3119;DP4=1165,1825,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.28629e-13;MQSB=0.937838;RPB=0.910337;SGB=74.9605;VDB=0.145389;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.6:20801787 chr06:020801787 0 W/20801787-20801787 FN-226 Single Base Substitution G-A INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2639-S.SNP.6:20801922 chr06:020801922 0 W/20801922-20801922 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.984474;DP=4756;DP4=2285,2209,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16012e-18;MQSB=0.9269;RPB=0.855376;SGB=68.5625;VDB=0.693425;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.6:20812780 chr06:020812780 0 W/20812780-20812780 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.983315;DP=2554;DP4=1241,1244,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.43182e-06;MQSB=0.688665;RPB=0.735239;SGB=43.3113;VDB=0.641962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A443V|528|LOC_Os06g35660|protein_coding|CODING|LOC_Os06g35660.1|1|1) FN2591-S.SNP.6:20827336 chr06:020827336 0 W/20827336-20827336 FN2591-S SNP C -> T AC=1;AN=198;BQB=0.780145;DP=4216;DP4=1874,2108,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.24708e-08;MQSB=0.965268;RPB=0.560751;SGB=40.149;VDB=0.390914;EFF=INTERGENIC(MODIFIER||||||||||1) W481-5-1.SNP.6:20829416 chr06:020829416 0 W/20829416-20829416 W481-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3697-S.SNP.6:20831323 chr06:020831323 0 W/20831323-20831323 FN3697-S SNP C -> T AC=1;AN=190;BQB=0.497325;DP=3103;DP4=1413,1436,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.73457e-07;MQSB=0.797244;RPB=0.371284;SGB=18.552;VDB=0.984612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.6:20832650 chr06:020832650 0 W/20832650-20832650 FN3831-S SNP T -> A AC=1;AN=190;BQB=0.857253;DP=2611;DP4=1207,1256,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21651e-07;MQSB=0.37794;RPB=0.235314;SGB=50.3161;VDB=0.434266;EFF=UTR_3_PRIME(MODIFIER||197||528|LOC_Os06g35700|protein_coding|CODING|LOC_Os06g35700.1|1|1) FN1337-S.SNP.6:20856018 chr06:020856018 0 W/20856018-20856018 FN1337-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN566-S.SNP.6:20856139 chr06:020856139 0 W/20856139-20856139 FN566-S Single Base Substitution T-C INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN968-S.SNP.6:20857134 chr06:020857134 0 W/20857134-20857134 FN968-S Single Base Substitution C-T INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN1413-S.SNP.6:20861967 chr06:020861967 0 W/20861967-20861967 FN1413-S Single Base Substitution T-G INTRON HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1623-S.SNP.6:20865004 chr06:020865004 0 W/20865004-20865004 FN1623-S Single Base Substitution A-T INTRON Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1384-S.SNP.6:20866383 chr06:020866383 0 W/20866383-20866383 FN1384-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3432-S.SNP.6:20876600 chr06:020876600 0 W/20876600-20876600 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.754043;DP=2380;DP4=1286,951,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93286e-07;MQSB=0.896921;RPB=0.804174;SGB=53.2642;VDB=0.233447;EFF=INTERGENIC(MODIFIER||||||||||1) FN-18.SNP.6:20882616 chr06:020882616 0 W/20882616-20882616 FN-18 Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os06g35780 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 18, Mutant_ID: FN-18, Generation: M2, Mutations: 69, Genes: 14, Seed availability: Yes. FN2372.SNP.6:20884319 chr06:020884319 0 W/20884319-20884319 FN2372 SNP A -> T AC=1;AN=192;BQB=0.960618;DP=4690;DP4=2204,2125,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.53206e-06;MQSB=0.937538;RPB=0.943807;SGB=-0.466926;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.6:20899722 chr06:020899722 0 W/20899722-20899722 FN1353-S Single Base Substitution G-T INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1353-S.SNP.6:20899723 chr06:020899723 0 W/20899723-20899723 FN1353-S Single Base Substitution T-A INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1698-S.SNP.6:20900352 chr06:020900352 0 W/20900352-20900352 FN1698-S SNP A -> C AC=2;AN=188;BQB=0.00751391;DP=3690;DP4=1712,1934,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.51555e-07;MQSB=0.999993;RPB=0.99988;SGB=-72.0994;VDB=0.972525;EFF=INTRON(MODIFIER||||217|LOC_Os06g35814|protein_coding|CODING|LOC_Os06g35814.1|1|1) FN1630-S.SNP.6:20921471 chr06:020921471 0 W/20921471-20921471 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3759-S.SNP.6:20924596 chr06:020924596 0 W/20924596-20924596 FN3759-S SNP G -> A AC=1;AN=190;BQB=0.989492;DP=3232;DP4=1197,1942,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22042e-09;MQSB=0.979703;RPB=0.561035;SGB=39.6545;VDB=0.502074;EFF=INTRON(MODIFIER||||312|LOC_Os06g35860|protein_coding|CODING|LOC_Os06g35860.1|1|1) FN3090-S.SNP.6:20926347 chr06:020926347 0 W/20926347-20926347 FN3090-S SNP G -> A AC=1;AN=184;BQB=0.869277;DP=3311;DP4=1671,1531,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.38325e-11;MQSB=0.986449;RPB=0.529544;SGB=71.3514;VDB=0.516404;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T99|312|LOC_Os06g35860|protein_coding|CODING|LOC_Os06g35860.1|3|1) FN1635-S.SNP.6:20928945 chr06:020928945 0 W/20928945-20928945 FN1635-S SNP C -> T AC=1;AN=188;BQB=0.0258379;DP=3481;DP4=1382,2044,4,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.63518e-05;MQSB=0.858487;RPB=0.927837;SGB=-58.9891;VDB=0.945585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.6:20930110 chr06:020930110 0 W/20930110-20930110 FN3924-S SNP G -> C AC=1;AN=158;BQB=0.817165;DP=3132;DP4=1433,1593,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.42608e-10;MQSB=0.983762;RPB=0.985428;SGB=73.2838;VDB=0.974344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Cga|G291R|640|LOC_Os06g35870|protein_coding|CODING|LOC_Os06g35870.1|1|1) FN1202-S.SNP.6:20932198 chr06:020932198 0 W/20932198-20932198 FN1202-S Single Base Substitution A-G INTRON HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2107-S.SNP.6:20936717 chr06:020936717 0 W/20936717-20936717 FN2107-S SNP G -> A AC=1;AN=168;BQB=0.00617799;DP=3588;DP4=1779,1774,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.27425e-06;MQSB=0.996004;RPB=0.975091;SGB=-38.3665;VDB=0.375539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.6:20945408 chr06:020945408 0 W/20945408-20945408 FN1106-S Single Base Substitution G-A INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3457-S.SNP.6:20945939 chr06:020945939 0 W/20945939-20945939 FN3457-S SNP G -> T AC=1;AN=184;BQB=0.823545;DP=2584;DP4=1290,1219,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55078e-07;MQSB=0.984849;RPB=0.95396;SGB=42.7914;VDB=0.921664;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.6:20951378 chr06:020951378 0 W/20951378-20951378 FN3563-S SNP A -> G AC=2;AN=188;BQB=0.996073;DP=2940;DP4=1607,1209,21,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.97017e-21;MQSB=0.948408;RPB=0.623254;SGB=117.48;VDB=0.137931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I155T|395|LOC_Os06g35910|protein_coding|CODING|LOC_Os06g35910.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I155T|549|LOC_Os06g35910|protein_coding|CODING|LOC_Os06g35910.1|2|1) FN3422-S.SNP.6:20961418 chr06:020961418 0 W/20961418-20961418 FN3422-S SNP C -> A AC=2;AN=184;BQB=0.996672;DP=3751;DP4=1796,1848,11,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.93354e-14;MQSB=0.93894;RPB=0.673174;SGB=107.526;VDB=0.431767;EFF=INTRON(MODIFIER||||273|LOC_Os06g35930|protein_coding|CODING|LOC_Os06g35930.1|2|1) FN1411-S.SNP.6:20962429 chr06:020962429 0 W/20962429-20962429 FN1411-S Single Base Substitution T-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2651-S.SNP.6:20962950 chr06:020962950 0 W/20962950-20962950 FN2651-S SNP G -> T AC=1;AN=200;BQB=0.122889;DP=4262;DP4=1927,1974,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.19781e-10;MQSB=0.385811;RPB=0.510543;SGB=54.6902;VDB=0.64913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.6:20965721 chr06:020965721 0 W/20965721-20965721 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1339-S.SNP.6:20975051 chr06:020975051 0 W/20975051-20975051 FN1339-S Single Base Substitution T-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.6:20975051 chr06:020975051 0 W/20975051-20975051 FN2311 SNP T -> C AC=1;AN=192;BQB=0.429569;DP=4203;DP4=1807,1405,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.38044e-11;MQSB=0.117595;RPB=0.996413;SGB=21.4339;VDB=0.441165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.6:20980666 chr06:020980666 0 W/20980666-20980666 FN3965-S SNP T -> C AC=1;AN=168;BQB=0.986597;DP=2287;DP4=1127,966,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08545e-09;MQSB=0.692841;RPB=0.681016;SGB=69.8961;VDB=0.88273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.6:20983567 chr06:020983567 0 W/20983567-20983567 FN1655-S Single Base Substitution T-G INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN4240-S.SNP.6:21007805 chr06:021007805 0 W/21007805-21007805 FN4240-S SNP G -> A AC=2;AN=170;BQB=0.941872;DP=2169;DP4=1233,847,15,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.64542e-11;MQSB=0.999829;RPB=0.949367;SGB=83.4133;VDB=0.808166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T68I|186|LOC_Os06g35970|protein_coding|CODING|LOC_Os06g35970.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T68I|154|LOC_Os06g35970|protein_coding|CODING|LOC_Os06g35970.2|2|1) FN1745-S.SNP.6:21014105 chr06:021014105 0 W/21014105-21014105 FN1745-S SNP C -> T AC=2;AN=188;BQB=0.920428;DP=3545;DP4=1580,1906,25,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.803e-20;MQSB=0.899872;RPB=0.99941;SGB=42.5773;VDB=0.296962;EFF=INTERGENIC(MODIFIER||||||||||1) FN866-S.SNP.6:21027900 chr06:021027900 0 W/21027900-21027900 FN866-S Single Base Substitution T-C INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN1043-S.SNP.6:21031895 chr06:021031895 0 W/21031895-21031895 FN1043-S Single Base Substitution C-T INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN952-S.SNP.6:21038668 chr06:021038668 0 W/21038668-21038668 FN952-S Single Base Substitution T-C INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1128-S.SNP.6:21043479 chr06:021043479 0 W/21043479-21043479 FN1128-S Single Base Substitution G-A INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN-176.SNP.6:21043591 chr06:021043591 0 W/21043591-21043591 FN-176 Single Base Substitution C-A INTERGENIC HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN1916.SNP.6:21047314 chr06:021047314 0 W/21047314-21047314 FN1916 Single Base Substitution G-C HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1373-S.SNP.6:21062220 chr06:021062220 0 W/21062220-21062220 FN1373-S Single Base Substitution G-A INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN4069-S.SNP.6:21084282 chr06:021084282 0 W/21084282-21084282 FN4069-S SNP C -> A AC=1;AN=182;BQB=0.984109;DP=2811;DP4=1443,1295,26,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.31939e-24;MQSB=0.992866;RPB=0.91054;SGB=137.443;VDB=0.0601863;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.6:21087505 chr06:021087505 0 W/21087505-21087505 FN881-S Single Base Substitution G-A INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1276-S.SNP.6:21091914 chr06:021091914 0 W/21091914-21091914 FN1276-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3674-S.SNP.6:21094192 chr06:021094192 0 W/21094192-21094192 FN3674-S SNP G -> A AC=2;AN=190;BQB=0.770053;DP=2995;DP4=1482,1409,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10874e-10;MQSB=0.949697;RPB=0.45383;SGB=94.6341;VDB=0.471712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.6:21096039 chr06:021096039 0 W/21096039-21096039 FN2397 SNP C -> T AC=1;AN=200;BQB=0.527533;DP=4570;DP4=2177,2148,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000437637;MQB=8.92602e-06;MQSB=0.0531915;RPB=0.538455;SGB=35.8441;VDB=0.237542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.6:21103792 chr06:021103792 0 W/21103792-21103792 FN1232-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g36080 kinesin motor domain containing protein, expressed SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3447-S.SNP.6:21109724 chr06:021109724 0 W/21109724-21109724 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.93283;DP=2341;DP4=1193,1098,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.73107e-05;MQSB=0.995269;RPB=0.995004;SGB=35.1773;VDB=0.140966;EFF=INTRON(MODIFIER||||1147|LOC_Os06g36080|protein_coding|CODING|LOC_Os06g36080.1|15|1) W278-3-1.SNP.6:21110877 chr06:021110877 0 W/21110877-21110877 W278-3-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g36080 kinesin motor domain containing protein, expressed SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN465-S.SNP.6:21110976 chr06:021110976 0 W/21110976-21110976 FN465-S Single Base Substitution C-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1162-S.SNP.6:21121132 chr06:021121132 0 W/21121132-21121132 FN1162-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN808-S.SNP.6:21124640 chr06:021124640 0 W/21124640-21124640 FN808-S Single Base Substitution A-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN-136.SNP.6:21125929 chr06:021125929 0 W/21125929-21125929 FN-136 Single Base Substitution G-A INTERGENIC HOMO SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN4065-S.SNP.6:21138031 chr06:021138031 0 W/21138031-21138031 FN4065-S SNP C -> A AC=1;AN=168;BQB=0.699105;DP=2988;DP4=1269,1611,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00106694;MQSB=0.986305;RPB=0.212103;SGB=34.4498;VDB=0.280204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D174E|1111|LOC_Os06g36110|protein_coding|CODING|LOC_Os06g36110.1|1|1) FN3859-S.SNP.6:21138658 chr06:021138658 0 W/21138658-21138658 FN3859-S SNP C -> T AC=1;AN=158;BQB=0.996655;DP=2821;DP4=1470,1248,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=4.36311e-05;MQSB=0.022572;RPB=0.588686;SGB=55.806;VDB=0.529691;EFF=INTRON(MODIFIER||||1111|LOC_Os06g36110|protein_coding|CODING|LOC_Os06g36110.1|1|1) FN-308.SNP.6:21141552 chr06:021141552 0 W/21141552-21141552 FN-308 Single Base Substitution G-A INTRON HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN-308.SNP.6:21141557 chr06:021141557 0 W/21141557-21141557 FN-308 Single Base Substitution T-A INTRON HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN-407.SNP.6:21150611 chr06:021150611 0 W/21150611-21150611 FN-407 Single Base Substitution C-T INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1118-S.SNP.6:21151493 chr06:021151493 0 W/21151493-21151493 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1385-S.SNP.6:21154834 chr06:021154834 0 W/21154834-21154834 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1385-S.SNP.6:21154835 chr06:021154835 0 W/21154835-21154835 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1280-S.SNP.6:21157378 chr06:021157378 0 W/21157378-21157378 FN1280-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2686-S.SNP.6:21160498 chr06:021160498 0 W/21160498-21160498 FN2686-S SNP G -> A AC=2;AN=200;BQB=0.985391;DP=5630;DP4=2521,2812,13,14;HOB=0.0198;ICB=0.495051;MQ=30;MQ0F=0.129307;MQB=0.0575628;MQSB=0;RPB=0.958664;SGB=87.1368;VDB=0.956775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.6:21161744 chr06:021161744 0 W/21161744-21161744 FN3600-S SNP G -> A AC=1;AN=190;BQB=0.659034;DP=2848;DP4=1370,1361,15,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.82057e-09;MQSB=0.563303;RPB=0.937146;SGB=64.5316;VDB=0.0659802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.6:21167504 chr06:021167504 0 W/21167504-21167504 FN3595-S SNP C -> T AC=1;AN=190;BQB=0.997043;DP=3158;DP4=1632,1409,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45671e-06;MQSB=0.998787;RPB=0.988485;SGB=44.5415;VDB=0.717752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.6:21171252 chr06:021171252 0 W/21171252-21171252 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.123664;DP=3862;DP4=1899,1636,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.46531e-10;MQSB=0.0445593;RPB=0.686663;SGB=28.7675;VDB=0.486796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A81S|544|LOC_Os06g36170|protein_coding|CODING|LOC_Os06g36170.1|1|1) FN-117.SNP.6:21172617 chr06:021172617 0 W/21172617-21172617 FN-117 Single Base Substitution A-C INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN2538-S.SNP.6:21178176 chr06:021178176 0 W/21178176-21178176 FN2538-S SNP T -> C AC=1;AN=198;BQB=0.321499;DP=4321;DP4=2218,1819,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.00181942;MQSB=0.31392;RPB=0.91045;SGB=16.3688;VDB=0.792905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.6:21190070 chr06:021190070 0 W/21190070-21190070 FN2184-S SNP A -> G AC=2;AN=190;BQB=0.828871;DP=5635;DP4=3049,2253,18,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000177462;MQB=5.90429e-20;MQSB=0.965265;RPB=0.190373;SGB=162.942;VDB=0.0903025;EFF=INTRON(MODIFIER||||487|LOC_Os06g36180|protein_coding|CODING|LOC_Os06g36180.1|2|1) FN980-S.SNP.6:21193489 chr06:021193489 0 W/21193489-21193489 FN980-S Single Base Substitution T-C INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. W596-1-1.SNP.6:21209272 chr06:021209272 0 W/21209272-21209272 W596-1-1 Single Base Substitution T-A INTRON HOMO SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN3536-S.SNP.6:21210050 chr06:021210050 0 W/21210050-21210050 FN3536-S SNP T -> C AC=1;AN=188;BQB=0.807943;DP=2646;DP4=1259,1268,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.41756e-07;MQSB=0.970295;RPB=0.998196;SGB=35.9843;VDB=0.638537;EFF=INTRON(MODIFIER||||474|LOC_Os06g36210|protein_coding|CODING|LOC_Os06g36210.1|1|1) FN3727-S.SNP.6:21210312 chr06:021210312 0 W/21210312-21210312 FN3727-S SNP T -> C AC=1;AN=190;BQB=0.955201;DP=2366;DP4=1139,1138,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38327e-05;MQSB=0.923925;RPB=0.468179;SGB=30.8803;VDB=0.31234;EFF=INTRON(MODIFIER||||474|LOC_Os06g36210|protein_coding|CODING|LOC_Os06g36210.1|1|1) FN1175-S.SNP.6:21216214 chr06:021216214 0 W/21216214-21216214 FN1175-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g36220 OsFBX198 - F-box domain containing protein, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-97.SNP.6:21218441 chr06:021218441 0 W/21218441-21218441 FN-97 Single Base Substitution G-A INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1192-S.SNP.6:21230561 chr06:021230561 0 W/21230561-21230561 FN1192-S Single Base Substitution G-A INTRON HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3296-S.SNP.6:21230561 chr06:021230561 0 W/21230561-21230561 FN3296-S SNP G -> A AC=2;AN=184;BQB=0.927746;DP=2979;DP4=1469,1417,9,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.44833e-11;MQSB=0.960555;RPB=0.97917;SGB=71.3514;VDB=0.188406;EFF=INTRON(MODIFIER||||125|LOC_Os06g36260|protein_coding|CODING|LOC_Os06g36260.1|1|1) FN3945-S.SNP.6:21230561 chr06:021230561 0 W/21230561-21230561 FN3945-S SNP G -> A AC=2;AN=168;BQB=0.961539;DP=2202;DP4=1181,929,10,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.81268e-12;MQSB=0.579612;RPB=0.921242;SGB=65.6253;VDB=0.640954;EFF=INTRON(MODIFIER||||125|LOC_Os06g36260|protein_coding|CODING|LOC_Os06g36260.1|1|1) FN754-S.SNP.6:21230561 chr06:021230561 0 W/21230561-21230561 FN754-S Single Base Substitution G-A INTRON HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2350.SNP.6:21231560 chr06:021231560 0 W/21231560-21231560 FN2350 SNP T -> C AC=1;AN=192;BQB=0.987633;DP=4747;DP4=2345,2142,14,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.66834e-11;MQSB=0.996221;RPB=0.998282;SGB=85.7252;VDB=0.701029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.6:21235873 chr06:021235873 0 W/21235873-21235873 FN1382-S Single Base Substitution C-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-123.SNP.6:21236882 chr06:021236882 0 W/21236882-21236882 FN-123 Single Base Substitution T-C INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN2545-S.SNP.6:21239751 chr06:021239751 0 W/21239751-21239751 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.752819;DP=4252;DP4=1871,2131,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0002e-06;MQSB=0.990481;RPB=0.925471;SGB=2.96892;VDB=0.972305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.6:21245083 chr06:021245083 0 W/21245083-21245083 FN2692-S SNP T -> G AC=1;AN=200;BQB=0.99826;DP=4650;DP4=2164,2249,11,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.5601e-08;MQSB=0.00128082;RPB=0.930132;SGB=61.9006;VDB=0.578307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.6:21250340 chr06:021250340 0 W/21250340-21250340 FN1195-S Single Base Substitution C-T INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3729-S.SNP.6:21266575 chr06:021266575 0 W/21266575-21266575 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.0302603;DP=2970;DP4=1644,1155,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000673401;MQB=1.11186e-05;MQSB=0.818949;RPB=0.72291;SGB=90.0802;VDB=0.648302;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.6:21267118 chr06:021267118 0 W/21267118-21267118 FN509-S Single Base Substitution A-G INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2273-S.SNP.6:21267318 chr06:021267318 0 W/21267318-21267318 FN2273-S SNP A -> C AC=1;AN=190;BQB=0.968196;DP=4708;DP4=2166,2213,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93076e-13;MQSB=0.81594;RPB=0.977009;SGB=75.1932;VDB=0.7084;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.6:21274818 chr06:021274818 0 W/21274818-21274818 FN1448-S Single Base Substitution T-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2428.SNP.6:21277398 chr06:021277398 0 W/21277398-21277398 FN2428 SNP C -> T AC=1;AN=200;BQB=0.812805;DP=4176;DP4=2079,1758,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.42201e-10;MQSB=0.957703;RPB=0.996698;SGB=12.7003;VDB=0.30385;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.6:21282764 chr06:021282764 0 W/21282764-21282764 FN-93 Single Base Substitution C-T INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1282-S.SNP.6:21283294 chr06:021283294 0 W/21283294-21283294 FN1282-S Single Base Substitution G-T INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN981-S.SNP.6:21284823 chr06:021284823 0 W/21284823-21284823 FN981-S Single Base Substitution G-A INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2541-S.SNP.6:21287872 chr06:021287872 0 W/21287872-21287872 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.99783;DP=3048;DP4=820,2029,3,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.06955e-08;MQSB=0.984432;RPB=0.7679;SGB=67.9293;VDB=0.675537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.6:21292380 chr06:021292380 0 W/21292380-21292380 FN2500 SNP A -> G AC=1;AN=200;BQB=0.999967;DP=4920;DP4=2491,2176,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09418e-07;MQSB=0.844419;RPB=0.610944;SGB=13.8539;VDB=0.432711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.6:21292705 chr06:021292705 0 W/21292705-21292705 FN2223-S SNP A -> T AC=2;AN=190;BQB=0.984369;DP=4711;DP4=2301,2036,40,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68345e-37;MQSB=0.805013;RPB=0.657386;SGB=138.584;VDB=0.00687747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.6:21292706 chr06:021292706 0 W/21292706-21292706 FN2223-S SNP C -> T AC=2;AN=190;BQB=0.998468;DP=4720;DP4=2347,2031,43,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.42472e-36;MQSB=0.762053;RPB=0.867976;SGB=78.6972;VDB=0.0692583;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.6:21295954 chr06:021295954 0 W/21295954-21295954 FN1715-S SNP T -> C AC=2;AN=188;BQB=0.909557;DP=4030;DP4=1854,2113,26,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.68608e-29;MQSB=0.908812;RPB=0.547618;SGB=112.548;VDB=0.112775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.6:21296281 chr06:021296281 0 W/21296281-21296281 FN3444-S SNP T -> C AC=1;AN=184;BQB=0.733327;DP=2239;DP4=1112,966,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000446628;MQB=1.93074e-05;MQSB=0.889067;RPB=0.813645;SGB=25.1826;VDB=0.633777;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.6:21299889 chr06:021299889 0 W/21299889-21299889 FN3849-S SNP G -> C AC=1;AN=158;BQB=0.89428;DP=1626;DP4=715,627,12,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.69505e-07;MQSB=0.749047;RPB=0.531882;SGB=40.8124;VDB=0.0631809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.6:21300878 chr06:021300878 0 W/21300878-21300878 FN3516-S SNP A -> C AC=2;AN=188;BQB=0.997286;DP=2804;DP4=1498,1234,13,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.32249e-11;MQSB=0.74511;RPB=0.999751;SGB=85.3253;VDB=0.0739848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.6:21300989 chr06:021300989 0 W/21300989-21300989 FN2324 SNP T -> C AC=2;AN=192;BQB=0.715068;DP=4876;DP4=2213,2304,21,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.61078e-17;MQSB=0.0171104;RPB=0.999967;SGB=125.324;VDB=0.540352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.6:21307241 chr06:021307241 0 W/21307241-21307241 FN2318 SNP G -> A AC=2;AN=192;BQB=0.996623;DP=4310;DP4=1911,2025,25,19;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=4.33988e-19;MQSB=2.4959e-05;RPB=0.280995;SGB=146.71;VDB=0.892948;EFF=INTERGENIC(MODIFIER||||||||||1) FN707-S.SNP.6:21307241 chr06:021307241 0 W/21307241-21307241 FN707-S Single Base Substitution G-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN969-S.SNP.6:21307241 chr06:021307241 0 W/21307241-21307241 FN969-S Single Base Substitution G-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN890-S.SNP.6:21312102 chr06:021312102 0 W/21312102-21312102 FN890-S Single Base Substitution C-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN-396.SNP.6:21313243 chr06:021313243 0 W/21313243-21313243 FN-396 Single Base Substitution T-C INTERGENIC HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN677-S.SNP.6:21315787 chr06:021315787 0 W/21315787-21315787 FN677-S Single Base Substitution G-C INTERGENIC HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3600-S.SNP.6:21318866 chr06:021318866 0 W/21318866-21318866 FN3600-S SNP G -> T AC=1;AN=190;BQB=0.377035;DP=3013;DP4=1517,1390,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50368e-06;MQSB=0.998345;RPB=0.708342;SGB=23.6597;VDB=0.524758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.6:21320050 chr06:021320050 0 W/21320050-21320050 FN3709-S SNP C -> G AC=2;AN=190;BQB=0.7457;DP=2737;DP4=1222,1415,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.61349e-11;MQSB=0.953552;RPB=0.986269;SGB=64.5316;VDB=0.429354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.6:21324893 chr06:021324893 0 W/21324893-21324893 FN3600-S SNP C -> T AC=1;AN=190;BQB=0.928937;DP=2845;DP4=1464,1236,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.51284e-10;MQSB=0.981186;RPB=0.23153;SGB=62.7569;VDB=0.0225399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.6:21328934 chr06:021328934 0 W/21328934-21328934 FN3572-S SNP C -> A AC=1;AN=188;BQB=0.863682;DP=2593;DP4=1269,1204,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.52735e-10;MQSB=0.81946;RPB=0.263532;SGB=89.8686;VDB=0.261151;EFF=INTRON(MODIFIER||||238|LOC_Os06g36340|protein_coding|CODING|LOC_Os06g36340.1|2|1) FN1623-S.SNP.6:21338836 chr06:021338836 0 W/21338836-21338836 FN1623-S Single Base Substitution C-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2282.SNP.6:21340840 chr06:021340840 0 W/21340840-21340840 FN2282 SNP A -> G AC=2;AN=192;BQB=0.777956;DP=4968;DP4=2234,2439,37,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.29724e-38;MQSB=0.747744;RPB=0.967286;SGB=164.824;VDB=0.0826843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.6:21343301 chr06:021343301 0 W/21343301-21343301 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.858145;DP=4751;DP4=2254,2239,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26351e-07;MQSB=0.963932;RPB=0.998579;SGB=25.849;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.6:21349099 chr06:021349099 0 W/21349099-21349099 W7-1-1 Single Base Substitution A-G INTRON HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3382-S.SNP.6:21350551 chr06:021350551 0 W/21350551-21350551 FN3382-S SNP T -> C AC=1;AN=184;BQB=0.953041;DP=3103;DP4=1369,1410,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.12011e-07;MQSB=0.0138201;RPB=0.755332;SGB=44.2207;VDB=0.0743271;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.6:21350552 chr06:021350552 0 W/21350552-21350552 FN3382-S SNP T -> C AC=1;AN=184;BQB=0.993151;DP=3092;DP4=1450,1399,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.4441e-07;MQSB=0.0167092;RPB=0.232517;SGB=0.715177;VDB=0.173624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.6:21358184 chr06:021358184 0 W/21358184-21358184 FN1339-S Single Base Substitution C-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3364-S.SNP.6:21359061 chr06:021359061 0 W/21359061-21359061 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.954537;DP=3402;DP4=1452,1711,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.64929e-06;MQSB=0.930649;RPB=0.887169;SGB=35.7479;VDB=0.991953;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.6:21359061 chr06:021359061 0 W/21359061-21359061 FN919-S Single Base Substitution G-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2103-S.SNP.6:21361463 chr06:021361463 0 W/21361463-21361463 FN2103-S SNP A -> G AC=1;AN=168;BQB=0.0467839;DP=3863;DP4=2074,1741,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.12555e-07;MQSB=0.995301;RPB=0.602432;SGB=-64.9298;VDB=0.858112;EFF=INTERGENIC(MODIFIER||||||||||1) FN-20.SNP.6:21365431 chr06:021365431 0 W/21365431-21365431 FN-20 Single Base Substitution C-T INTERGENIC Homo SNo: 20, Mutant_ID: FN-20, Generation: M2, Mutations: 31, Genes: 11, Seed availability: Yes. FN2471.SNP.6:21369629 chr06:021369629 0 W/21369629-21369629 FN2471 SNP A -> T AC=2;AN=200;BQB=0.624677;DP=5548;DP4=2944,2299,35,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.94516e-21;MQSB=0.0357984;RPB=0.994398;SGB=224.133;VDB=0.098702;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.6:21380316 chr06:021380316 0 W/21380316-21380316 FN4202-S SNP T -> C AC=1;AN=170;BQB=0.942444;DP=2295;DP4=970,1261,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=4.16285e-09;MQSB=0.831502;RPB=0.60849;SGB=70.0854;VDB=0.355629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.6:21381218 chr06:021381218 0 W/21381218-21381218 FN1748-S SNP T -> G AC=1;AN=188;BQB=0.0841105;DP=2078;DP4=1765,287,16,2;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00017167;MQSB=1.00281e-08;RPB=0.922591;SGB=8.62479;VDB=0.642473;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.6:21396610 chr06:021396610 0 W/21396610-21396610 FN752-S Single Base Substitution T-G INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN673-S.SNP.6:21420894 chr06:021420894 0 W/21420894-21420894 FN673-S Single Base Substitution A-T INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN2462.SNP.6:21426890 chr06:021426890 0 W/21426890-21426890 FN2462 SNP A -> G AC=1;AN=200;BQB=0.183582;DP=4818;DP4=2048,2514,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.85519e-12;MQSB=0.848406;RPB=0.96698;SGB=100.316;VDB=0.553667;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.6:21428998 chr06:021428998 0 W/21428998-21428998 FN3518-S SNP C -> G AC=1;AN=188;BQB=0.859276;DP=2490;DP4=1299,1135,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.97248e-05;MQSB=0.669249;RPB=0.994234;SGB=25.3545;VDB=0.000779696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.6:21431761 chr06:021431761 0 W/21431761-21431761 FN2587-S SNP C -> T AC=1;AN=198;BQB=0.772595;DP=4239;DP4=2197,1858,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01609e-06;MQSB=0.999947;RPB=0.944068;SGB=49.5489;VDB=0.40601;EFF=INTRON(MODIFIER||||216|LOC_Os06g36490|protein_coding|CODING|LOC_Os06g36490.1|3|1) FN2564-S.SNP.6:21437540 chr06:021437540 0 W/21437540-21437540 FN2564-S SNP T -> A AC=1;AN=198;BQB=0.851962;DP=5055;DP4=2554,2206,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0727992;MQB=0.740763;MQSB=9.81944e-36;RPB=0.885627;SGB=29.3637;VDB=0.363216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M953L|1251|LOC_Os06g36500|protein_coding|CODING|LOC_Os06g36500.1|9|1) FN819-S.SNP.6:21454916 chr06:021454916 0 W/21454916-21454916 FN819-S Single Base Substitution T-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN1348-S.SNP.6:21455073 chr06:021455073 0 W/21455073-21455073 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2619-S.SNP.6:21458149 chr06:021458149 0 W/21458149-21458149 FN2619-S SNP T -> C AC=2;AN=198;BQB=0.745772;DP=3834;DP4=1884,1728,23,24;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000260824;MQB=1.2729e-19;MQSB=0.29422;RPB=0.629968;SGB=55.6079;VDB=0.0646765;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.6:21480165 chr06:021480165 0 W/21480165-21480165 FN566-S Single Base Substitution A-T INTRON HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN4176-S.SNP.6:21486739 chr06:021486739 0 W/21486739-21486739 FN4176-S SNP T -> C AC=1;AN=170;BQB=0.989101;DP=2035;DP4=1062,915,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=0.000436641;MQSB=0.909006;RPB=0.975643;SGB=25.6601;VDB=0.576666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.6:21488561 chr06:021488561 0 W/21488561-21488561 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.746413;DP=2709;DP4=1351,1244,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.62763e-09;MQSB=0.166448;RPB=0.951618;SGB=108.042;VDB=0.151781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.6:21488599 chr06:021488599 0 W/21488599-21488599 FN2220-S SNP C -> G AC=1;AN=190;BQB=0.963423;DP=4698;DP4=2477,1958,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.66551e-10;MQSB=0.383394;RPB=0.907871;SGB=92.9626;VDB=0.431542;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.6:21489093 chr06:021489093 0 W/21489093-21489093 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1028-S.SNP.6:21489530 chr06:021489530 0 W/21489530-21489530 FN1028-S Single Base Substitution A-G INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. 704-1-1.SNP.6:21497878 chr06:021497878 0 W/21497878-21497878 704-1-1 Single Base Substitution A-T INTRON Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN4180-S.SNP.6:21504118 chr06:021504118 0 W/21504118-21504118 FN4180-S SNP T -> C AC=1;AN=170;BQB=0.713939;DP=2489;DP4=1359,1058,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0148654;MQB=0.146613;MQSB=0.699031;RPB=0.922948;SGB=47.8722;VDB=0.684275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.6:21506624 chr06:021506624 0 W/21506624-21506624 FN2465 SNP T -> C AC=2;AN=200;BQB=0.230187;DP=4689;DP4=2054,2293,32,34;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00042653;MQB=3.39048e-08;MQSB=4.79043e-10;RPB=0.977614;SGB=292.742;VDB=0.907159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.6:21510611 chr06:021510611 0 W/21510611-21510611 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.343229;DP=2482;DP4=155,2188,0,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=0.000202842;MQSB=0.000118739;RPB=0.970009;SGB=45.0543;VDB=0.872319;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.6:21528490 chr06:021528490 0 W/21528490-21528490 FN923-S Single Base Substitution C-A INTRON HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN883-S.SNP.6:21538960 chr06:021538960 0 W/21538960-21538960 FN883-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g36650 ABC transporter family protein, putative, expressed SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2470.SNP.6:21547746 chr06:021547746 0 W/21547746-21547746 FN2470 SNP G -> A AC=1;AN=200;BQB=0.0677099;DP=3940;DP4=1820,1801,15,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000230835;MQSB=0.262497;RPB=0.999977;SGB=95.7111;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.6:21553373 chr06:021553373 0 W/21553373-21553373 FN3966-S SNP T -> A AC=2;AN=168;BQB=0.752064;DP=2671;DP4=1336,1229,19,16;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.00205e-12;MQSB=0.794652;RPB=0.988853;SGB=70.8011;VDB=0.874498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.6:21553626 chr06:021553626 0 W/21553626-21553626 FN2704-S SNP T -> A AC=2;AN=200;BQB=0.00694766;DP=5259;DP4=2676,2286,40,45;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=2.17373e-16;MQSB=0.390653;RPB=0.000236531;SGB=191.859;VDB=0.37117;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.6:21555945 chr06:021555945 0 W/21555945-21555945 FN733-S Single Base Substitution T-A INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN873-S.SNP.6:21557849 chr06:021557849 0 W/21557849-21557849 FN873-S Single Base Substitution G-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2378.SNP.6:21560935 chr06:021560935 0 W/21560935-21560935 FN2378 SNP A -> G AC=1;AN=192;BQB=0.785802;DP=4873;DP4=2567,2110,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=4.48328e-06;MQSB=4.11402e-06;RPB=0.546683;SGB=90.2896;VDB=0.0999774;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.6:21561589 chr06:021561589 0 W/21561589-21561589 FN-329 Single Base Substitution A-G INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3780-S.SNP.6:21568261 chr06:021568261 0 W/21568261-21568261 FN3780-S SNP A -> C AC=2;AN=190;BQB=0.921624;DP=1934;DP4=1172,695,7,2;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.000263111;MQSB=0.185347;RPB=0.774836;SGB=21.8853;VDB=0.600144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.6:21571017 chr06:021571017 0 W/21571017-21571017 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.861407;DP=4111;DP4=1969,1903,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.99277e-15;MQSB=0.992154;RPB=0.653205;SGB=86.8856;VDB=0.215185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.6:21571749 chr06:021571749 0 W/21571749-21571749 FN-154 Single Base Substitution C-T INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN4304-S.SNP.6:21573334 chr06:021573334 0 W/21573334-21573334 FN4304-S SNP A -> T AC=1;AN=170;BQB=0.99456;DP=2145;DP4=1106,996,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000319101;MQSB=0.411876;RPB=0.994496;SGB=25.6601;VDB=0.188964;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.6:21577017 chr06:021577017 0 W/21577017-21577017 FN-362 Single Base Substitution C-T INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN-207.SNP.6:21577666 chr06:021577666 0 W/21577666-21577666 FN-207 Single Base Substitution G-A INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3806-S.SNP.6:21582156 chr06:021582156 0 W/21582156-21582156 FN3806-S SNP G -> A AC=2;AN=190;BQB=0.338231;DP=2647;DP4=1325,1237,13,12;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0;MQB=1.55805e-09;MQSB=0.149036;RPB=0.928077;SGB=78.7471;VDB=0.817988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.6:21585244 chr06:021585244 0 W/21585244-21585244 FN3864-S SNP C -> T AC=1;AN=158;BQB=0.954522;DP=2461;DP4=1152,1131,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000229634;MQSB=0.857653;RPB=0.964822;SGB=40.8124;VDB=0.257186;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.6:21588246 chr06:021588246 0 W/21588246-21588246 FN-125 Single Base Substitution G-T INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-75.SNP.6:21588246 chr06:021588246 0 W/21588246-21588246 FN-75 Single Base Substitution G-T INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2617-S.SNP.6:21588246 chr06:021588246 0 W/21588246-21588246 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.999193;DP=4327;DP4=2080,1965,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.77522e-12;MQSB=0.902696;RPB=0.991352;SGB=58.1246;VDB=0.0847087;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.6:21594659 chr06:021594659 0 W/21594659-21594659 FN794-S Single Base Substitution G-T INTERGENIC HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1315-S.SNP.6:21598690 chr06:021598690 0 W/21598690-21598690 FN1315-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g36700 T-complex protein, putative, expressed SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1315-S.SNP.6:21598691 chr06:021598691 0 W/21598691-21598691 FN1315-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2434.SNP.6:21601236 chr06:021601236 0 W/21601236-21601236 FN2434 SNP A -> T AC=1;AN=200;BQB=0.264479;DP=4494;DP4=2122,2093,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000665928;MQSB=0.960313;RPB=0.171223;SGB=22.2439;VDB=0.386322;EFF=INTRON(MODIFIER||||535|LOC_Os06g36700|protein_coding|CODING|LOC_Os06g36700.1|2|1) FN-222.SNP.6:21605303 chr06:021605303 0 W/21605303-21605303 FN-222 Single Base Substitution T-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3712-S.SNP.6:21605852 chr06:021605852 0 W/21605852-21605852 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.34894;DP=2636;DP4=1006,1492,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00261678;MQSB=0.846075;RPB=0.999471;SGB=8.33661;VDB=0.942216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.6:21607224 chr06:021607224 0 W/21607224-21607224 FN3306-S SNP G -> C AC=1;AN=184;BQB=0.812064;DP=2672;DP4=1346,1252,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70277e-07;MQSB=0.975241;RPB=0.962687;SGB=23.2751;VDB=0.412108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.6:21622193 chr06:021622193 0 W/21622193-21622193 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.831852;DP=2734;DP4=1353,1276,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73293e-10;MQSB=0.856212;RPB=0.969739;SGB=46.7622;VDB=0.287158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.6:21627839 chr06:021627839 0 W/21627839-21627839 FN3814-S SNP A -> G AC=1;AN=190;BQB=0.952319;DP=3321;DP4=1442,1782,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23656e-05;MQSB=0.995749;RPB=0.996695;SGB=30.8803;VDB=0.158094;EFF=INTRON(MODIFIER||||1819|LOC_Os06g36730|protein_coding|CODING|LOC_Os06g36730.1|2|1) FN3832-S.SNP.6:21628597 chr06:021628597 0 W/21628597-21628597 FN3832-S SNP G -> A AC=2;AN=190;BQB=0.994472;DP=3217;DP4=1583,1518,16,15;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=5.11605e-11;MQSB=1.44927e-05;RPB=0.932811;SGB=135.619;VDB=0.596953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R328W|1819|LOC_Os06g36730|protein_coding|CODING|LOC_Os06g36730.1|1|1) FN3381-S.SNP.6:21633729 chr06:021633729 0 W/21633729-21633729 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.996796;DP=3745;DP4=1411,2232,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.336716;MQB=0.324521;MQSB=0;RPB=0.753792;SGB=42.7914;VDB=0.941701;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.6:21637399 chr06:021637399 0 W/21637399-21637399 FN541-S Single Base Substitution A-T INTERGENIC HOMO SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3903-S.SNP.6:21648748 chr06:021648748 0 W/21648748-21648748 FN3903-S SNP G -> T AC=1;AN=158;BQB=0.85313;DP=2516;DP4=1243,1179,13,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.13783e-12;MQSB=0.973991;RPB=0.228862;SGB=82.0227;VDB=0.0569933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.6:21655474 chr06:021655474 0 W/21655474-21655474 FN1057-S Single Base Substitution G-T INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2659-S.SNP.6:21658664 chr06:021658664 0 W/21658664-21658664 FN2659-S SNP T -> A AC=1;AN=200;BQB=0.876661;DP=4826;DP4=2466,2150,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.60444e-12;MQSB=0.980938;RPB=0.249747;SGB=-37.6845;VDB=0.747353;EFF=SPLICE_SITE_REGION(LOW||||522|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.1|6|1),SPLICE_SITE_REGION(LOW||||521|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.2|6|1),SPLICE_SITE_REGION(LOW||||433|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.3|5|1),INTRON(MODIFIER||||522|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.1|6|1),INTRON(MODIFIER||||521|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.2|6|1),INTRON(MODIFIER||||433|LOC_Os06g36770|protein_coding|CODING|LOC_Os06g36770.3|5|1) FN4072-S.SNP.6:21663279 chr06:021663279 0 W/21663279-21663279 FN4072-S SNP G -> T AC=2;AN=182;BQB=0.717577;DP=2822;DP4=1335,1415,11,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.91677e-16;MQSB=0.921412;RPB=0.471856;SGB=111.774;VDB=0.369648;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.6:21663280 chr06:021663280 0 W/21663280-21663280 FN4072-S SNP A -> G AC=2;AN=182;BQB=0.996338;DP=2819;DP4=1313,1417,13,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.08799e-18;MQSB=0.884688;RPB=0.711885;SGB=91.8015;VDB=0.37718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.6:21667813 chr06:021667813 0 W/21667813-21667813 FN2448 SNP C -> A AC=1;AN=200;BQB=0.106574;DP=4695;DP4=2653,1655,5,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00103277;MQSB=0.982701;RPB=0.978353;SGB=26.6347;VDB=0.846879;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.6:21676529 chr06:021676529 0 W/21676529-21676529 FN3928-S SNP A -> G AC=1;AN=158;BQB=0.823885;DP=2301;DP4=1165,1054,13,3;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0;MQB=3.02696e-05;MQSB=0.145692;RPB=0.936128;SGB=44.1818;VDB=0.771915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.6:21683045 chr06:021683045 0 W/21683045-21683045 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.311015;DP=4176;DP4=2266,1826,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.01816e-07;MQSB=0.974449;RPB=0.549183;SGB=-168.619;VDB=0.306609;EFF=INTRON(MODIFIER||||477|LOC_Os06g36800|protein_coding|CODING|LOC_Os06g36800.1|12|1) FN2308.SNP.6:21683045 chr06:021683045 0 W/21683045-21683045 FN2308 SNP A -> T AC=2;AN=192;BQB=0.444801;DP=4803;DP4=2348,2129,24,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000208203;MQB=1.58793e-15;MQSB=0.790323;RPB=0.927352;SGB=-43.6052;VDB=0.145338;EFF=INTRON(MODIFIER||||477|LOC_Os06g36800|protein_coding|CODING|LOC_Os06g36800.1|12|1) FN3912-S.SNP.6:21689408 chr06:021689408 0 W/21689408-21689408 FN3912-S SNP G -> T AC=1;AN=158;BQB=0.925646;DP=2085;DP4=882,1111,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.00138e-07;MQSB=0.960018;RPB=0.564581;SGB=30.704;VDB=0.43896;EFF=INTERGENIC(MODIFIER||||||||||1) FN1275-S.SNP.6:21693620 chr06:021693620 0 W/21693620-21693620 FN1275-S Single Base Substitution C-T INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN4175-S.SNP.6:21694985 chr06:021694985 0 W/21694985-21694985 FN4175-S SNP A -> G AC=2;AN=170;BQB=0.82813;DP=2366;DP4=1100,1148,13,5;HOB=0.0232526;ICB=0.494188;MQ=26;MQ0F=0.247675;MQB=0.0405964;MQSB=0;RPB=0.272161;SGB=74.528;VDB=0.170987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.6:21700344 chr06:021700344 0 W/21700344-21700344 FN1679-S SNP T -> C AC=2;AN=188;BQB=0.982181;DP=3480;DP4=1439,1987,17,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.92921e-23;MQSB=0.964273;RPB=0.0726408;SGB=0.755789;VDB=0.0443461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.6:21703876 chr06:021703876 0 W/21703876-21703876 FN2288 SNP T -> C AC=1;AN=192;BQB=0.80023;DP=4915;DP4=2274,2353,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=2.15237e-12;MQSB=0.16265;RPB=0.767866;SGB=12.0478;VDB=0.288261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.6:21704466 chr06:021704466 0 W/21704466-21704466 FN1239-S Single Base Substitution A-T INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2755-S.SNP.6:21705788 chr06:021705788 0 W/21705788-21705788 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.885367;DP=5019;DP4=2285,2420,10,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.56587e-07;MQSB=0.572071;RPB=0.994337;SGB=72.7161;VDB=0.208004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.6:21707894 chr06:021707894 0 W/21707894-21707894 FN1716-S SNP T -> C AC=1;AN=188;BQB=0.130197;DP=2755;DP4=1482,1219,16,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64952e-08;MQSB=0.962623;RPB=0.998927;SGB=-69.186;VDB=0.333462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.6:21708525 chr06:021708525 0 W/21708525-21708525 FN3577-S SNP C -> T AC=2;AN=188;BQB=0.972902;DP=2393;DP4=1296,1016,18,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.42043e-16;MQSB=0.995692;RPB=0.977126;SGB=121.672;VDB=0.342151;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.6:21709826 chr06:021709826 0 W/21709826-21709826 FN-141 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN2537-S.SNP.6:21711130 chr06:021711130 0 W/21711130-21711130 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.12607;DP=3736;DP4=1696,1848,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.27932e-07;MQSB=7.9513e-08;RPB=0.817517;SGB=68.91;VDB=0.919076;EFF=INTRON(MODIFIER||||273|LOC_Os06g36850|protein_coding|CODING|LOC_Os06g36850.1|2|1) 707-4.SNP.6:21714604 chr06:021714604 0 W/21714604-21714604 707-4 Single Base Substitution T-G INTERGENIC Homo SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. FN-75.SNP.6:21733337 chr06:021733337 0 W/21733337-21733337 FN-75 Single Base Substitution A-G INTRON HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN4231-S.SNP.6:21738315 chr06:021738315 0 W/21738315-21738315 FN4231-S SNP C -> T AC=1;AN=170;BQB=0.46379;DP=2397;DP4=1150,1186,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.50782e-05;MQSB=0.999113;RPB=0.91851;SGB=34.878;VDB=0.498311;EFF=INTRON(MODIFIER||||473|LOC_Os06g36890|protein_coding|CODING|LOC_Os06g36890.1|2|1) FN777-S.SNP.6:21741884 chr06:021741884 0 W/21741884-21741884 FN777-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN925-S.SNP.6:21742393 chr06:021742393 0 W/21742393-21742393 FN925-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g36900 retrotransposon protein, putative, unclassified SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN-141.SNP.6:21753753 chr06:021753753 0 W/21753753-21753753 FN-141 Single Base Substitution G-T INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-141.SNP.6:21753754 chr06:021753754 0 W/21753754-21753754 FN-141 Single Base Substitution T-A INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3902-S.SNP.6:21756477 chr06:021756477 0 W/21756477-21756477 FN3902-S SNP T -> C AC=2;AN=158;BQB=0.995469;DP=2330;DP4=1054,1171,7,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.8692e-13;MQSB=0.780267;RPB=0.854316;SGB=108.239;VDB=0.419079;EFF=INTRON(MODIFIER||||549|LOC_Os06g36920|protein_coding|CODING|LOC_Os06g36920.1|3|1) FN-202.SNP.6:21770702 chr06:021770702 0 W/21770702-21770702 FN-202 Single Base Substitution G-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2320.SNP.6:21774723 chr06:021774723 0 W/21774723-21774723 FN2320 SNP C -> A AC=2;AN=192;BQB=0.96642;DP=4998;DP4=2573,2088,25,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.02776e-23;MQSB=0.368776;RPB=0.707727;SGB=-96.0852;VDB=0.425353;EFF=INTRON(MODIFIER||||674|LOC_Os06g36960|protein_coding|CODING|LOC_Os06g36960.1|6|1) FN_N1-116-1.SNP.6:21777483 chr06:021777483 0 W/21777483-21777483 FN_N1-116-1 Single Base Substitution T-A Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1660-S.SNP.6:21778151 chr06:021778151 0 W/21778151-21778151 FN1660-S Single Base Substitution A-G INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3341-S.SNP.6:21781642 chr06:021781642 0 W/21781642-21781642 FN3341-S SNP C -> A AC=1;AN=184;BQB=0.933918;DP=5133;DP4=2418,2587,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0181181;MQB=0.00030453;MQSB=0.866581;RPB=0.938778;SGB=39.2697;VDB=0.95731;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L674|961|LOC_Os06g36970|protein_coding|CODING|LOC_Os06g36970.1|5|1) FN901-S.SNP.6:21793424 chr06:021793424 0 W/21793424-21793424 FN901-S Single Base Substitution A-C INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. 704-3.SNP.6:21798032 chr06:021798032 0 W/21798032-21798032 704-3 Single Base Substitution C-T INTERGENIC Homo SNo: 1457, Mutant_ID: 704-3, Generation: M2, Mutations: 21, Genes: 8, Seed availability: Yes. FN3840-S.SNP.6:21805108 chr06:021805108 0 W/21805108-21805108 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.947961;DP=2839;DP4=1396,1325,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.09746e-10;MQSB=0.883284;RPB=0.640904;SGB=62.7569;VDB=0.243516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.6:21806860 chr06:021806860 0 W/21806860-21806860 FN3064-S SNP T -> A AC=2;AN=184;BQB=0.674248;DP=2550;DP4=1283,1176,6,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.96934e-05;MQSB=0.978885;RPB=0.677705;SGB=39.699;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.6:21807973 chr06:021807973 0 W/21807973-21807973 FN2691-S SNP A -> G AC=1;AN=200;BQB=0.123518;DP=5214;DP4=2270,2727,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.62753e-13;MQSB=0.99584;RPB=0.00284623;SGB=104.921;VDB=0.0154971;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.6:21809538 chr06:021809538 0 W/21809538-21809538 FN943-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN4137-S.SNP.6:21818069 chr06:021818069 0 W/21818069-21818069 FN4137-S SNP T -> C AC=2;AN=170;BQB=0.970036;DP=2792;DP4=1561,1055,14,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.9251e-14;MQSB=0.957922;RPB=0.929639;SGB=105.627;VDB=0.72947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.6:21820800 chr06:021820800 0 W/21820800-21820800 FN3790-S SNP C -> G AC=1;AN=190;BQB=0.962491;DP=2447;DP4=990,1368,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.57604e-08;MQSB=0.934133;RPB=0.959629;SGB=21.1058;VDB=0.979791;EFF=SPLICE_SITE_REGION(LOW||||285|LOC_Os06g37000|protein_coding|CODING|LOC_Os06g37000.1|4|1),SPLICE_SITE_REGION(LOW||||285|LOC_Os06g37000|protein_coding|CODING|LOC_Os06g37000.2|5|1),INTRON(MODIFIER||||285|LOC_Os06g37000|protein_coding|CODING|LOC_Os06g37000.1|4|1),INTRON(MODIFIER||||285|LOC_Os06g37000|protein_coding|CODING|LOC_Os06g37000.2|5|1) FN2618-S.SNP.6:21831826 chr06:021831826 0 W/21831826-21831826 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.896428;DP=4065;DP4=1886,1939,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82706e-10;MQSB=0.99868;RPB=0.513849;SGB=37.1297;VDB=0.747235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.6:21833778 chr06:021833778 0 W/21833778-21833778 FN1557-S Single Base Substitution C-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN421-S.SNP.6:21833838 chr06:021833838 0 W/21833838-21833838 FN421-S Single Base Substitution C-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN423-S.SNP.6:21838824 chr06:021838824 0 W/21838824-21838824 FN423-S Single Base Substitution G-T INTERGENIC HET SNo: 422, Mutant_ID: FN423-S, Generation: M2, Mutations: 5, Genes: 1, Seed availability: Yes. FN2541-S.SNP.6:21839117 chr06:021839117 0 W/21839117-21839117 FN2541-S SNP C -> A AC=1;AN=198;BQB=0.923352;DP=4327;DP4=2063,2013,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.18153e-07;MQSB=0.988302;RPB=0.644278;SGB=63.3342;VDB=0.447743;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.6:21845906 chr06:021845906 0 W/21845906-21845906 W278-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1075-S.SNP.6:21846001 chr06:021846001 0 W/21846001-21846001 FN1075-S Single Base Substitution G-T INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1286-S.SNP.6:21850480 chr06:021850480 0 W/21850480-21850480 FN1286-S Single Base Substitution C-T INTRON HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN4230-S.SNP.6:21850521 chr06:021850521 0 W/21850521-21850521 FN4230-S SNP G -> A AC=2;AN=170;BQB=0.997316;DP=2549;DP4=1266,1159,15,5;HOB=0.0232526;ICB=0.494188;MQ=26;MQ0F=0.0557081;MQB=0.965473;MQSB=0;RPB=0.474176;SGB=83.4133;VDB=0.45048;EFF=INTRON(MODIFIER||||1515|LOC_Os06g37030|protein_coding|CODING|LOC_Os06g37030.1|1|1) FN3058-S.SNP.6:21857520 chr06:021857520 0 W/21857520-21857520 FN3058-S SNP G -> T AC=1;AN=184;BQB=0.417659;DP=3072;DP4=1534,1396,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00878906;MQB=0.000295641;MQSB=2.13521e-05;RPB=0.999667;SGB=56.8786;VDB=0.695523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.6:21858413 chr06:021858413 0 W/21858413-21858413 FN1707-S SNP T -> A AC=1;AN=188;BQB=0.31073;DP=2942;DP4=1662,1255,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.318831;MQB=0.141007;MQSB=0;RPB=0.822168;SGB=3.99491;VDB=0.810286;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.6:21863538 chr06:021863538 0 W/21863538-21863538 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.995147;DP=4214;DP4=2658,1471,14,9;HOB=6.03792e-05;ICB=0.000121422;MQ=32;MQ0F=0.112957;MQB=0.283948;MQSB=0;RPB=0.571279;SGB=70.7363;VDB=0.405254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R183W|2027|LOC_Os06g37040|protein_coding|CODING|LOC_Os06g37040.1|1|1) FN3536-S.SNP.6:21872569 chr06:021872569 0 W/21872569-21872569 FN3536-S SNP G -> C AC=1;AN=188;BQB=0.928608;DP=6112;DP4=3450,2557,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=14;MQ0F=0.506708;MQB=0.0102925;MQSB=0;RPB=0.996892;SGB=85.3253;VDB=0.302763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L152V|1047|LOC_Os06g37050|protein_coding|CODING|LOC_Os06g37050.1|1|1) FN482-S.SNP.6:21873242 chr06:021873242 0 W/21873242-21873242 FN482-S Single Base Substitution C-T INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN1695-S.SNP.6:21876903 chr06:021876903 0 W/21876903-21876903 FN1695-S SNP T -> A AC=2;AN=188;BQB=0.0342022;DP=2344;DP4=946,1342,9,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.96011e-10;MQSB=0.650353;RPB=0.989783;SGB=-9.56681;VDB=0.670551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.6:21879217 chr06:021879217 0 W/21879217-21879217 FN2190-S SNP T -> A AC=1;AN=190;BQB=0.97526;DP=4764;DP4=2455,1893,24,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9073e-19;MQSB=0.973875;RPB=0.842259;SGB=114.286;VDB=0.323291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.6:21888456 chr06:021888456 0 W/21888456-21888456 FN2314 SNP T -> C AC=1;AN=192;BQB=0.995243;DP=5508;DP4=2395,2774,2,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000181554;MQB=6.8629e-08;MQSB=0.789305;RPB=0.986814;SGB=21.2209;VDB=0.1448;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.6:21893671 chr06:021893671 0 W/21893671-21893671 FN1423-S Single Base Substitution A-G INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.6:21893671 chr06:021893671 0 W/21893671-21893671 FN1433-S Single Base Substitution A-G INTRON HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2261-S.SNP.6:21903887 chr06:021903887 0 W/21903887-21903887 FN2261-S SNP C -> A AC=2;AN=190;BQB=0.594946;DP=4772;DP4=2094,2319,49,56;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.90454e-44;MQSB=0.00543443;RPB=0.0896539;SGB=352.973;VDB=0.252876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.6:21922484 chr06:021922484 0 W/21922484-21922484 FN3817-S SNP C -> A AC=1;AN=190;BQB=0.970375;DP=2917;DP4=1730,1115,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0322249;MQB=0.0660327;MQSB=9.84781e-05;RPB=0.981189;SGB=53.6492;VDB=0.427717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q333K|467|LOC_Os06g37120|protein_coding|CODING|LOC_Os06g37120.1|1|1) FN2583-S.SNP.6:21924057 chr06:021924057 0 W/21924057-21924057 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.914178;DP=4864;DP4=2442,2155,16,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.04232e-11;MQSB=0.0078289;RPB=0.697214;SGB=68.5625;VDB=0.381669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.6:21929151 chr06:021929151 0 W/21929151-21929151 FN3477-S SNP G -> A AC=2;AN=184;BQB=0.999131;DP=3030;DP4=1610,1294,23,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.6957e-22;MQSB=0.987961;RPB=0.652181;SGB=141.402;VDB=0.306877;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.6:21931516 chr06:021931516 0 W/21931516-21931516 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.871471;DP=4501;DP4=2006,2206,17,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.59528e-20;MQSB=0.609294;RPB=0.451659;SGB=123.188;VDB=0.916783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.6:21933399 chr06:021933399 0 W/21933399-21933399 FN1339-S Single Base Substitution T-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3799-S.SNP.6:21934141 chr06:021934141 0 W/21934141-21934141 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.971878;DP=3025;DP4=1496,1420,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40711e-06;MQSB=0.736818;RPB=0.946135;SGB=25.439;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.6:21934585 chr06:021934585 0 W/21934585-21934585 FN3693-S SNP C -> T AC=2;AN=190;BQB=0.869819;DP=3082;DP4=1194,1649,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.23553e-12;MQSB=0.383524;RPB=0.996723;SGB=25.8654;VDB=0.959045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.6:21938071 chr06:021938071 0 W/21938071-21938071 FN1373-S Single Base Substitution G-A INTRON HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. W466-5-1.SNP.6:21940000 chr06:021940000 0 W/21940000-21940000 W466-5-1 Single Base Substitution T-C INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3773-S.SNP.6:21946478 chr06:021946478 0 W/21946478-21946478 FN3773-S SNP G -> T AC=1;AN=190;BQB=0.708727;DP=3229;DP4=1599,1427,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=1.11652e-08;MQSB=3.29469e-05;RPB=0.925809;SGB=57.4238;VDB=0.68931;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.6:21946652 chr06:021946652 0 W/21946652-21946652 FN-349 Single Base Substitution A-G INTERGENIC HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1263-S.SNP.6:21983343 chr06:021983343 0 W/21983343-21983343 FN1263-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g37224 cytochrome P450, putative, expressed SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2551-S.SNP.6:21992600 chr06:021992600 0 W/21992600-21992600 FN2551-S SNP A -> C AC=1;AN=198;BQB=0.187354;DP=3243;DP4=1560,1535,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.000616713;MQB=7.06505e-05;MQSB=0.102074;RPB=0.950224;SGB=81.7147;VDB=0.891163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.6:22007714 chr06:022007714 0 W/22007714-22007714 FN3830-S SNP C -> A AC=1;AN=190;BQB=0.575;DP=3075;DP4=1657,1278,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.92036e-05;MQSB=0.000887516;RPB=0.94072;SGB=80.9724;VDB=0.576734;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.6:22013021 chr06:022013021 0 W/22013021-22013021 FN4140-S SNP C -> A AC=2;AN=170;BQB=0.898044;DP=2608;DP4=1474,1056,13,15;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=9.50451e-10;MQSB=0.508955;RPB=0.986722;SGB=118.955;VDB=0.216234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A821E|1397|LOC_Os06g37290|protein_coding|CODING|LOC_Os06g37290.1|1|1) FN468-S.SNP.6:22020342 chr06:022020342 0 W/22020342-22020342 FN468-S Single Base Substitution A-T INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1206-S.SNP.6:22034754 chr06:022034754 0 W/22034754-22034754 FN1206-S Single Base Substitution C-T INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN3382-S.SNP.6:22036801 chr06:022036801 0 W/22036801-22036801 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.953391;DP=3194;DP4=1448,1651,1,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83769e-07;MQSB=0.506392;RPB=0.789212;SGB=44.2207;VDB=0.805328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.6:22036802 chr06:022036802 0 W/22036802-22036802 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.97481;DP=3192;DP4=1450,1649,2,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.57391e-08;MQSB=0.279881;RPB=0.518179;SGB=48.7425;VDB=0.803336;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.6:22037916 chr06:022037916 0 W/22037916-22037916 FN559-S Single Base Substitution G-A INTERGENIC HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2272-S.SNP.6:22041606 chr06:022041606 0 W/22041606-22041606 FN2272-S SNP C -> T AC=1;AN=188;BQB=0.472392;DP=4509;DP4=1947,1923,12,17;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=9.69811e-10;MQSB=0.00831053;RPB=0.841302;SGB=-74.7804;VDB=0.825308;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.6:22044214 chr06:022044214 0 W/22044214-22044214 FN725-S Single Base Substitution T-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN468-S.SNP.6:22049595 chr06:022049595 0 W/22049595-22049595 FN468-S Single Base Substitution G-A INTRON HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2739-S.SNP.6:22050073 chr06:022050073 0 W/22050073-22050073 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.981565;DP=4592;DP4=2134,2152,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34648e-15;MQSB=0.845364;RPB=0.759416;SGB=79.9264;VDB=0.789457;EFF=INTRON(MODIFIER||||504|LOC_Os06g37330|protein_coding|CODING|LOC_Os06g37330.1|7|1) FN_772-3-1.SNP.6:22051509 chr06:022051509 0 W/22051509-22051509 FN_772-3-1 Single Base Substitution A-G Homo SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN3453-S.SNP.6:22054125 chr06:022054125 0 W/22054125-22054125 FN3453-S SNP G -> A AC=1;AN=184;BQB=0.999618;DP=2613;DP4=1407,1118,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0;MQB=0.116047;MQSB=0.933612;RPB=0.988826;SGB=48.7425;VDB=0.920644;EFF=INTRON(MODIFIER||||504|LOC_Os06g37330|protein_coding|CODING|LOC_Os06g37330.1|1|1) FN1058-S.SNP.6:22059152 chr06:022059152 0 W/22059152-22059152 FN1058-S Single Base Substitution T-C INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2139-S.SNP.6:22063425 chr06:022063425 0 W/22063425-22063425 FN2139-S SNP T -> A AC=1;AN=168;BQB=0.270067;DP=3786;DP4=1733,2007,7,23;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=1.27124e-06;MQSB=0.00159441;RPB=0.947427;SGB=-10.2027;VDB=0.262485;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.6:22063462 chr06:022063462 0 W/22063462-22063462 FN1577-S Single Base Substitution C-T INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2500.SNP.6:22068383 chr06:022068383 0 W/22068383-22068383 FN2500 SNP A -> G AC=1;AN=200;BQB=0.99431;DP=4672;DP4=2167,2215,10,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.05614e-08;MQSB=0.721895;RPB=0.854137;SGB=15.9106;VDB=0.257325;EFF=INTRON(MODIFIER||||1147|LOC_Os06g37340|protein_coding|CODING|LOC_Os06g37340.1|6|1) FN475-S.SNP.6:22068715 chr06:022068715 0 W/22068715-22068715 FN475-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g37340 retrotransposon protein, putative, unclassified, expressed SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1290-S.SNP.6:22074458 chr06:022074458 0 W/22074458-22074458 FN1290-S Single Base Substitution C-T INTRON HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN2622-S.SNP.6:22082001 chr06:022082001 0 W/22082001-22082001 FN2622-S SNP G -> A AC=2;AN=200;BQB=0.0866146;DP=4431;DP4=2014,2080,28,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.08812e-29;MQSB=0.848762;RPB=0.689031;SGB=195.292;VDB=0.888032;EFF=INTRON(MODIFIER||||538|LOC_Os06g37364|protein_coding|CODING|LOC_Os06g37364.1|1|1),INTRON(MODIFIER||||505|LOC_Os06g37364|protein_coding|CODING|LOC_Os06g37364.2|1|1) FN-188.SNP.6:22084575 chr06:022084575 0 W/22084575-22084575 FN-188 Single Base Substitution A-G INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN934-S.SNP.6:22087969 chr06:022087969 0 W/22087969-22087969 FN934-S Single Base Substitution C-T INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3419-S.SNP.6:22098071 chr06:022098071 0 W/22098071-22098071 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.46192;DP=2736;DP4=1279,1363,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0;MQB=0.0195955;MQSB=0.25954;RPB=0.520319;SGB=44.2207;VDB=0.192965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.6:22101271 chr06:022101271 0 W/22101271-22101271 FN3520-S SNP T -> C AC=2;AN=188;BQB=0.980371;DP=2312;DP4=913,1186,11,11;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0;MQB=2.47489e-05;MQSB=0.0493295;RPB=0.186858;SGB=41.3359;VDB=0.368947;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.6:22101503 chr06:022101503 0 W/22101503-22101503 FN-113 Single Base Substitution A-T INTERGENIC HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN244-S.SNP.6:22103500 chr06:022103500 0 W/22103500-22103500 FN244-S Single Base Substitution G-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2377.SNP.6:22103637 chr06:022103637 0 W/22103637-22103637 FN2377 SNP G -> A AC=1;AN=192;BQB=0.13738;DP=4582;DP4=2425,1880,22,18;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0;MQB=4.71584e-15;MQSB=0.0753538;RPB=0.798725;SGB=132.453;VDB=0.070465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S2331F|2350|LOC_Os06g37400|protein_coding|CODING|LOC_Os06g37400.1|9|1) FN-291.SNP.6:22104280 chr06:022104280 0 W/22104280-22104280 FN-291 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g37400 retrotransposon protein, putative, unclassified, expressed SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2138-S.SNP.6:22106664 chr06:022106664 0 W/22106664-22106664 FN2138-S SNP C -> A AC=1;AN=168;BQB=0.816833;DP=3622;DP4=1567,2016,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.16869e-15;MQSB=0.931473;RPB=0.987118;SGB=79.3486;VDB=0.195178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G1635V|2350|LOC_Os06g37400|protein_coding|CODING|LOC_Os06g37400.1|5|1) FN1309-S.SNP.6:22108473 chr06:022108473 0 W/22108473-22108473 FN1309-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g37400 retrotransposon protein, putative, unclassified, expressed SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4113-S.SNP.6:22115708 chr06:022115708 0 W/22115708-22115708 FN4113-S SNP C -> T AC=1;AN=182;BQB=0.853856;DP=2971;DP4=1576,1270,10,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.19548e-14;MQSB=0.610094;RPB=0.30549;SGB=111.774;VDB=0.253615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.6:22124585 chr06:022124585 0 W/22124585-22124585 FN2129-S SNP C -> T AC=2;AN=168;BQB=0.443105;DP=4091;DP4=1872,2140,40,27;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.82784e-17;MQSB=0.00305021;RPB=0.968147;SGB=-137.112;VDB=0.206767;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||352|LOC_Os06g37420|protein_coding|CODING|LOC_Os06g37420.1|10|1),SPLICE_SITE_ACCEPTOR(HIGH||||277|LOC_Os06g37420|protein_coding|CODING|LOC_Os06g37420.2|10|1),INTRON(MODIFIER||||352|LOC_Os06g37420|protein_coding|CODING|LOC_Os06g37420.1|9|1),INTRON(MODIFIER||||277|LOC_Os06g37420|protein_coding|CODING|LOC_Os06g37420.2|9|1);LOF=(LOC_Os06g37420|LOC_Os06g37420|2|1.00) FN503-S.SNP.6:22125447 chr06:022125447 0 W/22125447-22125447 FN503-S Single Base Substitution A-G INTRON HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN813-S.SNP.6:22129511 chr06:022129511 0 W/22129511-22129511 FN813-S Single Base Substitution G-A INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN2483.SNP.6:22130406 chr06:022130406 0 W/22130406-22130406 FN2483 SNP G -> A AC=1;AN=200;BQB=0.94152;DP=3811;DP4=1592,1776,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57625e-06;MQSB=0.0337492;RPB=0.98313;SGB=36.6644;VDB=0.356154;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W7*|404|LOC_Os06g37430|protein_coding|CODING|LOC_Os06g37430.2|1|1),START_LOST(HIGH|MISSENSE|atG/atA|M1I|436|LOC_Os06g37430|protein_coding|CODING|LOC_Os06g37430.1|1|1);LOF=(LOC_Os06g37430|LOC_Os06g37430|2|1.00);NMD=(LOC_Os06g37430|LOC_Os06g37430|2|0.50) FN2577-S.SNP.6:22131596 chr06:022131596 0 W/22131596-22131596 FN2577-S SNP T -> C AC=2;AN=198;BQB=0.996077;DP=4356;DP4=2063,1969,13,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.80315e-13;MQSB=0.953351;RPB=0.65028;SGB=113.881;VDB=0.359087;EFF=INTRON(MODIFIER||||436|LOC_Os06g37430|protein_coding|CODING|LOC_Os06g37430.1|2|1),INTRON(MODIFIER||||404|LOC_Os06g37430|protein_coding|CODING|LOC_Os06g37430.2|3|1) FN355-S.SNP.6:22133013 chr06:022133013 0 W/22133013-22133013 FN355-S Single Base Substitution T-G INTRON HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN-204.SNP.6:22142236 chr06:022142236 0 W/22142236-22142236 FN-204 Single Base Substitution T-A INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-325.SNP.6:22150178 chr06:022150178 0 W/22150178-22150178 FN-325 Single Base Substitution G-A INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN726-S.SNP.6:22157050 chr06:022157050 0 W/22157050-22157050 FN726-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN726-S.SNP.6:22157051 chr06:022157051 0 W/22157051-22157051 FN726-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2652-S.SNP.6:22165436 chr06:022165436 0 W/22165436-22165436 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.996517;DP=4224;DP4=2023,1977,6,14;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0;MQB=0.300561;MQSB=6.56797e-12;RPB=0.597571;SGB=86.5007;VDB=0.993924;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D577|603|LOC_Os06g37460|protein_coding|CODING|LOC_Os06g37460.1|3|1) FN924-S.SNP.6:22169286 chr06:022169286 0 W/22169286-22169286 FN924-S Single Base Substitution A-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3489-S.SNP.6:22169773 chr06:022169773 0 W/22169773-22169773 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.893795;DP=3662;DP4=2004,1567,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.00034668;MQSB=2.15478e-06;RPB=0.961025;SGB=74.4875;VDB=0.711627;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G367R|402|LOC_Os06g37480|protein_coding|CODING|LOC_Os06g37480.1|2|1) FN4172-S.SNP.6:22170521 chr06:022170521 0 W/22170521-22170521 FN4172-S SNP C -> G AC=1;AN=170;BQB=0.93156;DP=2680;DP4=1427,1203,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.01747e-07;MQSB=0.588868;RPB=0.891957;SGB=52.3148;VDB=0.522346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E167D|402|LOC_Os06g37480|protein_coding|CODING|LOC_Os06g37480.1|1|1) FN_846-8-1.SNP.6:22176543 chr06:022176543 0 W/22176543-22176543 FN_846-8-1 Single Base Substitution A-T HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2740-S.SNP.6:22177702 chr06:022177702 0 W/22177702-22177702 FN2740-S SNP G -> A AC=2;AN=200;BQB=0.981979;DP=4713;DP4=2078,2407,30,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=3.71382e-16;MQSB=0.148259;RPB=0.999966;SGB=112.85;VDB=0.968265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.6:22180151 chr06:022180151 0 W/22180151-22180151 FN2739-S SNP A -> C AC=1;AN=200;BQB=0.664471;DP=4483;DP4=2384,1891,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.20403e-09;MQSB=0.748224;RPB=0.996333;SGB=14.3054;VDB=0.641426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.6:22189191 chr06:022189191 0 W/22189191-22189191 FN3039-S SNP G -> C AC=2;AN=184;BQB=0.924895;DP=3131;DP4=1475,1509,18,8;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.000319387;MQB=4.55443e-10;MQSB=4.52201e-16;RPB=0.529969;SGB=81.5311;VDB=0.220471;EFF=INTERGENIC(MODIFIER||||||||||1) FN-145.SNP.6:22192443 chr06:022192443 0 W/22192443-22192443 FN-145 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-145.SNP.6:22192445 chr06:022192445 0 W/22192445-22192445 FN-145 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g37500 cytokinin dehydrogenase precursor, putative, expressed SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN2562-S.SNP.6:22200893 chr06:022200893 0 W/22200893-22200893 FN2562-S SNP T -> C AC=1;AN=198;BQB=0.385901;DP=4031;DP4=1794,1998,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.46215e-13;MQSB=0.922182;RPB=0.46453;SGB=44.9151;VDB=0.538412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.6:22201000 chr06:022201000 0 W/22201000-22201000 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.991518;DP=4237;DP4=1890,1993,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.33628e-09;MQSB=0.994326;RPB=0.609771;SGB=67.9293;VDB=0.521675;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.6:22215955 chr06:022215955 0 W/22215955-22215955 FN679-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g37530 expressed protein SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3416-S.SNP.6:22217563 chr06:022217563 0 W/22217563-22217563 FN3416-S SNP T -> G AC=1;AN=184;BQB=0.315871;DP=3096;DP4=1546,1431,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29779e-05;MQSB=0.765879;RPB=0.474002;SGB=20.7533;VDB=0.936957;EFF=INTRON(MODIFIER||||291|LOC_Os06g37530|protein_coding|CODING|LOC_Os06g37530.1|1|1) FN4050-S.SNP.6:22220947 chr06:022220947 0 W/22220947-22220947 FN4050-S SNP G -> A AC=2;AN=168;BQB=0.647766;DP=2575;DP4=1112,1312,28,24;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.99984e-19;MQSB=0.541094;RPB=0.782122;SGB=128.352;VDB=0.562945;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.6:22221542 chr06:022221542 0 W/22221542-22221542 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.321965;DP=2398;DP4=1151,1174,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=6.54189e-07;MQSB=0.620781;RPB=0.909085;SGB=19.8839;VDB=0.011779;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.6:22221543 chr06:022221543 0 W/22221543-22221543 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.454385;DP=2386;DP4=1141,1161,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.00004e-06;MQSB=0.7885;RPB=0.978195;SGB=43.4296;VDB=0.0167595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.6:22222229 chr06:022222229 0 W/22222229-22222229 FN3857-S SNP T -> C AC=1;AN=158;BQB=0.991487;DP=2562;DP4=1526,803,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.05963e-07;MQSB=0.774164;RPB=0.847749;SGB=19.0798;VDB=0.568866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.6:22224264 chr06:022224264 0 W/22224264-22224264 FN3933-S SNP T -> C AC=2;AN=158;BQB=0.976625;DP=2343;DP4=1284,912,23,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.9375e-16;MQSB=0.92797;RPB=0.995516;SGB=91.3541;VDB=0.0339086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.6:22226898 chr06:022226898 0 W/22226898-22226898 FN2191-S SNP A -> G AC=1;AN=190;BQB=0.557258;DP=4356;DP4=2143,1747,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.59692e-09;MQSB=0.84484;RPB=0.651366;SGB=2.55724;VDB=0.167284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.6:22230188 chr06:022230188 0 W/22230188-22230188 FN1274-S Single Base Substitution A-G INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN2765-S.SNP.6:22233198 chr06:022233198 0 W/22233198-22233198 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.999587;DP=4157;DP4=1852,2130,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.44548e-09;MQSB=0.984296;RPB=0.658825;SGB=9.3494;VDB=0.139073;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.6:22246654 chr06:022246654 0 W/22246654-22246654 FN445-S Single Base Substitution G-A SPLICE_SITE_DONOR HET LOC_Os06g37560 beta-galactosidase precursor, putative, expressed SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1279-S.SNP.6:22248460 chr06:022248460 0 W/22248460-22248460 FN1279-S Single Base Substitution C-T INTRON HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1470-S.SNP.6:22259300 chr06:022259300 0 W/22259300-22259300 FN1470-S Single Base Substitution T-G UTR_5_PRIME HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2492.SNP.6:22264997 chr06:022264997 0 W/22264997-22264997 FN2492 SNP C -> G AC=2;AN=200;BQB=0.651456;DP=4710;DP4=2230,2222,26,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2459e-22;MQSB=0.97016;RPB=0.629968;SGB=187.814;VDB=0.827288;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.6:22268365 chr06:022268365 0 W/22268365-22268365 FN815-S Single Base Substitution G-A INTRON HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN-184.SNP.6:22276362 chr06:022276362 0 W/22276362-22276362 FN-184 Single Base Substitution T-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-240.SNP.6:22276363 chr06:022276363 0 W/22276363-22276363 FN-240 Single Base Substitution A-T INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2351.SNP.6:22279547 chr06:022279547 0 W/22279547-22279547 FN2351 SNP A -> G AC=1;AN=192;BQB=0.163814;DP=4978;DP4=2596,2074,17,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.5102e-13;MQSB=0.937364;RPB=0.517281;SGB=-39.6843;VDB=0.727115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.6:22281600 chr06:022281600 0 W/22281600-22281600 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.350743;DP=5338;DP4=2664,2423,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.62393e-14;MQSB=0.760166;RPB=0.416209;SGB=15.9106;VDB=0.82429;EFF=INTRON(MODIFIER||||844|LOC_Os06g37630|protein_coding|CODING|LOC_Os06g37630.1|7|1) FN3393-S.SNP.6:22282467 chr06:022282467 0 W/22282467-22282467 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.136958;DP=3282;DP4=1637,1485,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0;MQB=0.084098;MQSB=0.0417906;RPB=0.49862;SGB=28.3187;VDB=0.130391;EFF=INTRON(MODIFIER||||844|LOC_Os06g37630|protein_coding|CODING|LOC_Os06g37630.1|5|1) FN2795-S.SNP.6:22288501 chr06:022288501 0 W/22288501-22288501 FN2795-S SNP G -> T AC=2;AN=198;BQB=0.228329;DP=4083;DP4=1806,2050,16,17;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0;MQB=1.32556e-14;MQSB=0.931267;RPB=0.996734;SGB=108.456;VDB=0.965856;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.6:22289129 chr06:022289129 0 W/22289129-22289129 FN2160-S SNP G -> A AC=2;AN=168;BQB=0.0400951;DP=4426;DP4=2091,2284,20,20;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=4.98232e-06;MQSB=0.698095;RPB=0.868406;SGB=-94.7442;VDB=0.938843;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.6:22296456 chr06:022296456 0 W/22296456-22296456 FN1252-S Single Base Substitution C-T INTRON HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2237-S.SNP.6:22302757 chr06:022302757 0 W/22302757-22302757 FN2237-S SNP G -> T AC=1;AN=190;BQB=0.919966;DP=5164;DP4=2525,2367,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193648;MQB=2.27199e-05;MQSB=0.984647;RPB=0.864728;SGB=18.3316;VDB=0.755557;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.6:22307570 chr06:022307570 0 W/22307570-22307570 FN-305 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g37660 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN2663-S.SNP.6:22308469 chr06:022308469 0 W/22308469-22308469 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.877542;DP=4915;DP4=2302,2381,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51326e-15;MQSB=0.999722;RPB=0.999758;SGB=114.132;VDB=0.230114;EFF=INTRON(MODIFIER||||306|LOC_Os06g37660|protein_coding|CODING|LOC_Os06g37660.1|1|1) FN2312.SNP.6:22323258 chr06:022323258 0 W/22323258-22323258 FN2312 SNP T -> C AC=1;AN=192;BQB=0.990767;DP=4885;DP4=2073,2420,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.00122825;MQB=0.840679;MQSB=9.04451e-06;RPB=0.98632;SGB=-39.6843;VDB=0.00273515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.6:22335558 chr06:022335558 0 W/22335558-22335558 FN-299 Single Base Substitution T-G INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN3472-S.SNP.6:22350302 chr06:022350302 0 W/22350302-22350302 FN3472-S SNP C -> T AC=2;AN=184;BQB=0.864672;DP=2882;DP4=1537,1191,14,26;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0;MQB=1.15411e-12;MQSB=0.994374;RPB=0.930613;SGB=175.352;VDB=0.960266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.6:22359023 chr06:022359023 0 W/22359023-22359023 FN3385-S SNP G -> A AC=2;AN=184;BQB=0.999769;DP=3232;DP4=1619,1510,14,12;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0163985;MQB=0.000123492;MQSB=2.96416e-34;RPB=0.924764;SGB=51.0148;VDB=0.676706;EFF=INTRON(MODIFIER||||687|LOC_Os06g37760|protein_coding|CODING|LOC_Os06g37760.1|2|1) FN1285-S.SNP.6:22372655 chr06:022372655 0 W/22372655-22372655 FN1285-S Single Base Substitution C-T INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2729-S.SNP.6:22386679 chr06:022386679 0 W/22386679-22386679 FN2729-S SNP T -> C AC=1;AN=200;BQB=0.998628;DP=5036;DP4=2440,2424,14,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=3.48124e-14;MQSB=6.71165e-05;RPB=0.125913;SGB=90.7419;VDB=0.487705;EFF=INTRON(MODIFIER||||790|LOC_Os06g37820|protein_coding|CODING|LOC_Os06g37820.1|1|1) FN3757-S.SNP.6:22397795 chr06:022397795 0 W/22397795-22397795 FN3757-S SNP G -> A AC=1;AN=190;BQB=0.582939;DP=2757;DP4=1261,1400,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00034987;MQSB=0.154364;RPB=0.901148;SGB=36.1006;VDB=0.832957;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L292|414|LOC_Os06g37840|protein_coding|CODING|LOC_Os06g37840.1|1|1) FN3050-S.SNP.6:22397939 chr06:022397939 0 W/22397939-22397939 FN3050-S SNP A -> T AC=2;AN=184;BQB=0.91236;DP=3463;DP4=1849,1462,18,17;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=3.42146e-21;MQSB=0.824445;RPB=0.811597;SGB=113.227;VDB=0.260019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L244M|414|LOC_Os06g37840|protein_coding|CODING|LOC_Os06g37840.1|1|1) FN3050-S.SNP.6:22397942 chr06:022397942 0 W/22397942-22397942 FN3050-S SNP C -> T AC=2;AN=184;BQB=0.636676;DP=3480;DP4=1860,1517,18,16;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.35429e-20;MQSB=0.937119;RPB=0.754224;SGB=71.1891;VDB=0.476901;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E243K|414|LOC_Os06g37840|protein_coding|CODING|LOC_Os06g37840.1|1|1) FN4231-S.SNP.6:22399536 chr06:022399536 0 W/22399536-22399536 FN4231-S SNP T -> G AC=1;AN=170;BQB=0.980295;DP=2283;DP4=1040,1179,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.20492e-08;MQSB=0.993183;RPB=0.631995;SGB=47.8722;VDB=0.181895;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.6:22399914 chr06:022399914 0 W/22399914-22399914 FN3628-S SNP G -> A AC=2;AN=190;BQB=0.987113;DP=3244;DP4=1393,1544,12,10;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0;MQB=7.08576e-05;MQSB=2.41012e-11;RPB=0.803673;SGB=68.0854;VDB=0.371066;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.6:22410498 chr06:022410498 0 W/22410498-22410498 FN-311 Single Base Substitution T-C INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2412.SNP.6:22412206 chr06:022412206 0 W/22412206-22412206 FN2412 SNP A -> T AC=1;AN=200;BQB=0.894857;DP=4571;DP4=2200,2012,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.15257e-08;MQSB=1.70972e-06;RPB=0.145354;SGB=37.3004;VDB=0.460964;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.6:22413038 chr06:022413038 0 W/22413038-22413038 FN494-S Single Base Substitution T-G INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1557-S.SNP.6:22417130 chr06:022417130 0 W/22417130-22417130 FN1557-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN548-S.SNP.6:22417130 chr06:022417130 0 W/22417130-22417130 FN548-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN756-S.SNP.6:22417130 chr06:022417130 0 W/22417130-22417130 FN756-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN1076-S.SNP.6:22418075 chr06:022418075 0 W/22418075-22418075 FN1076-S Single Base Substitution G-T INTRON HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN1478-S.SNP.6:22422828 chr06:022422828 0 W/22422828-22422828 FN1478-S Single Base Substitution C-T INTERGENIC Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1647-S.SNP.6:22423171 chr06:022423171 0 W/22423171-22423171 FN1647-S Single Base Substitution C-T INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN3323-S.SNP.6:22426624 chr06:022426624 0 W/22426624-22426624 FN3323-S SNP G -> C AC=1;AN=184;BQB=0.611288;DP=1750;DP4=939,742,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.0021503;MQSB=0.202441;RPB=0.946813;SGB=28.7043;VDB=0.413878;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.6:22427494 chr06:022427494 0 W/22427494-22427494 FN695-S Single Base Substitution A-G INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN944-S.SNP.6:22429462 chr06:022429462 0 W/22429462-22429462 FN944-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g37880 expressed protein SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN4344-S.SNP.6:22432299 chr06:022432299 0 W/22432299-22432299 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.610592;DP=2162;DP4=947,1064,3,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.70154e-07;MQSB=0.999785;RPB=0.238554;SGB=74.528;VDB=0.42197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.6:22435748 chr06:022435748 0 W/22435748-22435748 FN2487 SNP C -> G AC=1;AN=200;BQB=0.889402;DP=4656;DP4=2632,1717,14,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00343643;MQB=0.000147203;MQSB=0.183323;RPB=0.64813;SGB=39.9056;VDB=0.244909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D826H|1007|LOC_Os06g37890|protein_coding|CODING|LOC_Os06g37890.1|7|1) FN585-S.SNP.6:22435824 chr06:022435824 0 W/22435824-22435824 FN585-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1031-S.SNP.6:22467073 chr06:022467073 0 W/22467073-22467073 FN1031-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g37990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2141-S.SNP.6:22482817 chr06:022482817 0 W/22482817-22482817 FN2141-S SNP G -> T AC=1;AN=168;BQB=0.0393863;DP=1692;DP4=783,806,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00945626;MQB=0.05416;MQSB=0.000448127;RPB=0.656757;SGB=24.6155;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.6:22486304 chr06:022486304 0 W/22486304-22486304 FN3761-S SNP A -> T AC=2;AN=190;BQB=0.810808;DP=2519;DP4=915,1450,5,12;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00516078;MQB=0.00146526;MQSB=0;RPB=0.674412;SGB=50.3161;VDB=0.959812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.6:22493760 chr06:022493760 0 W/22493760-22493760 FN3464-S SNP A -> T AC=1;AN=184;BQB=0.920698;DP=2768;DP4=1169,1520,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.00165941;MQSB=0.608407;RPB=0.818593;SGB=18.1394;VDB=0.0752373;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.6:22494240 chr06:022494240 0 W/22494240-22494240 FN912-S Single Base Substitution A-C INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN491-S.SNP.6:22497548 chr06:022497548 0 W/22497548-22497548 FN491-S Single Base Substitution T-A INTRON HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN-132.SNP.6:22498571 chr06:022498571 0 W/22498571-22498571 FN-132 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2182-S.SNP.6:22500068 chr06:022500068 0 W/22500068-22500068 FN2182-S SNP C -> A AC=1;AN=190;BQB=0.99965;DP=4737;DP4=2351,2090,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00105552;MQB=3.00616e-06;MQSB=0.231657;RPB=0.20348;SGB=96.5165;VDB=0.0811703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.6:22502342 chr06:022502342 0 W/22502342-22502342 FN2172-S SNP C -> A AC=1;AN=168;BQB=0.963637;DP=2862;DP4=1023,1811,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.22724e-06;MQSB=0.0156418;RPB=0.968111;SGB=48.4712;VDB=0.793773;EFF=UTR_3_PRIME(MODIFIER||11||65|LOC_Os06g38056|protein_coding|CODING|LOC_Os06g38056.1|2|1) FN1375-S.SNP.6:22522070 chr06:022522070 0 W/22522070-22522070 FN1375-S Single Base Substitution G-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN780-S.SNP.6:22523595 chr06:022523595 0 W/22523595-22523595 FN780-S Single Base Substitution T-A INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN920-S.SNP.6:22532586 chr06:022532586 0 W/22532586-22532586 FN920-S Single Base Substitution G-A INTRON HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN4108-S.SNP.6:22535137 chr06:022535137 0 W/22535137-22535137 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.975546;DP=3010;DP4=1388,1558,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.2763e-06;MQSB=0.613601;RPB=0.355728;SGB=32.1169;VDB=0.769043;EFF=INTRON(MODIFIER||||528|LOC_Os06g38090|protein_coding|CODING|LOC_Os06g38090.1|1|1) FN2612-S.SNP.6:22546253 chr06:022546253 0 W/22546253-22546253 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.990728;DP=1724;DP4=878,731,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0;MQB=0.666396;MQSB=0.0116496;RPB=0.178611;SGB=32.9588;VDB=0.000571573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.6:22657434 chr06:022657434 0 W/22657434-22657434 FN-407 Single Base Substitution G-A INTRON HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.6:22657434 chr06:022657434 0 W/22657434-22657434 FN407-S Single Base Substitution G-A INTRON HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN3938-S.SNP.6:22657551 chr06:022657551 0 W/22657551-22657551 FN3938-S SNP C -> A AC=2;AN=158;BQB=0.364403;DP=2780;DP4=1551,1100,16,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.90386e-07;MQSB=0.849681;RPB=0.438491;SGB=95.131;VDB=0.100418;EFF=INTRON(MODIFIER||||590|LOC_Os06g38294|protein_coding|CODING|LOC_Os06g38294.1|3|1) FN2562-S.SNP.6:22661402 chr06:022661402 0 W/22661402-22661402 FN2562-S SNP T -> A AC=2;AN=198;BQB=0.376637;DP=3583;DP4=2083,1264,26,23;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=5.17058e-13;MQSB=0.0018592;RPB=0.999626;SGB=112.388;VDB=0.555048;EFF=INTRON(MODIFIER||||590|LOC_Os06g38294|protein_coding|CODING|LOC_Os06g38294.1|3|1) FN4175-S.SNP.6:22665844 chr06:022665844 0 W/22665844-22665844 FN4175-S SNP G -> A AC=2;AN=170;BQB=0.977974;DP=2101;DP4=958,1071,9,10;HOB=0.0232526;ICB=0.494188;MQ=34;MQ0F=0;MQB=0.00058986;MQSB=0.0297502;RPB=0.481703;SGB=78.9707;VDB=0.0499312;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.6:22675157 chr06:022675157 0 W/22675157-22675157 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.225424;DP=3217;DP4=1660,1507,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.00155424;MQB=0.000979516;MQSB=5.43864e-15;RPB=0.999383;SGB=-41.2125;VDB=0.425958;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-285.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN-285 Single Base Substitution C-T INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1131-S.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN1131-S Single Base Substitution C-T INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN488-S.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN488-S Single Base Substitution C-T INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN833-S.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN833-S Single Base Substitution C-T INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN962-S.SNP.6:22677815 chr06:022677815 0 W/22677815-22677815 FN962-S Single Base Substitution C-T INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1538-S.SNP.6:22681695 chr06:022681695 0 W/22681695-22681695 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3696-S.SNP.6:22681695 chr06:022681695 0 W/22681695-22681695 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.944234;DP=2634;DP4=1088,1453,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.000379651;MQB=0.00128632;MQSB=0.000553717;RPB=0.999019;SGB=39.9877;VDB=0.448353;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.6:22681695 chr06:022681695 0 W/22681695-22681695 FN4163-S SNP G -> A AC=2;AN=170;BQB=0.771525;DP=2156;DP4=857,1232,3,11;HOB=0.0232526;ICB=0.494188;MQ=41;MQ0F=0;MQB=0.00146826;MQSB=0.055474;RPB=0.447911;SGB=38.3207;VDB=0.0506985;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.6:22683825 chr06:022683825 0 W/22683825-22683825 FN804-S Single Base Substitution G-T INTERGENIC HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. W475-4-2.SNP.6:22687389 chr06:022687389 0 W/22687389-22687389 W475-4-2 Single Base Substitution T-C INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. W443-5-1-3.SNP.6:22689602 chr06:022689602 0 W/22689602-22689602 W443-5-1-3 Single Base Substitution G-T INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN1316-S.SNP.6:22816759 chr06:022816759 0 W/22816759-22816759 FN1316-S Single Base Substitution C-T INTERGENIC HET SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1704-S.SNP.6:22818941 chr06:022818941 0 W/22818941-22818941 FN1704-S SNP G -> A AC=1;AN=188;BQB=0.359511;DP=2738;DP4=781,1926,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.000592954;MQSB=0.721691;RPB=0.086944;SGB=35.3493;VDB=0.380722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.6:22841109 chr06:022841109 0 W/22841109-22841109 FN1720-S SNP G -> A AC=1;AN=188;BQB=0.000204932;DP=3005;DP4=1296,1640,21,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000600636;MQSB=0.0532184;RPB=0.635046;SGB=-188.997;VDB=0.724657;EFF=INTRON(MODIFIER||||84|LOC_Os06g38564|protein_coding|CODING|LOC_Os06g38564.1|2|1) FN2707-S.SNP.6:22849119 chr06:022849119 0 W/22849119-22849119 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.00773398;DP=4838;DP4=2475,2186,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84333e-07;MQSB=0.978787;RPB=0.338688;SGB=-11.8999;VDB=0.837236;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.6:22855392 chr06:022855392 0 W/22855392-22855392 FN799-S Single Base Substitution T-A INTERGENIC HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN3382-S.SNP.6:22864345 chr06:022864345 0 W/22864345-22864345 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.739;DP=2957;DP4=1414,1456,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.08877e-14;MQSB=0.871624;RPB=0.282511;SGB=45.9712;VDB=0.319349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I383N|1104|LOC_Os06g38590|protein_coding|CODING|LOC_Os06g38590.1|1|1) FN921-S.SNP.6:22866172 chr06:022866172 0 W/22866172-22866172 FN921-S Single Base Substitution C-A INTRON HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-233.SNP.6:22871045 chr06:022871045 0 W/22871045-22871045 FN-233 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g38600 expressed protein SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1684-S.SNP.6:22872651 chr06:022872651 0 W/22872651-22872651 FN1684-S SNP C -> T AC=1;AN=188;BQB=0.23786;DP=4046;DP4=2027,1990,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.00702e-05;MQSB=0.999443;RPB=0.810145;SGB=-35.9944;VDB=0.316144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.6:22874490 chr06:022874490 0 W/22874490-22874490 FN1020-S Single Base Substitution C-T INTERGENIC HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN3481-S.SNP.6:22932596 chr06:022932596 0 W/22932596-22932596 FN3481-S SNP A -> T AC=1;AN=184;BQB=0.682253;DP=2905;DP4=1580,1235,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.99719e-11;MQSB=0.992685;RPB=0.972516;SGB=70.9657;VDB=0.878839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.6:22940258 chr06:022940258 0 W/22940258-22940258 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.908719;DP=2783;DP4=1334,1354,13,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61402e-15;MQSB=0.766506;RPB=0.736343;SGB=125.613;VDB=0.86142;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y423|605|LOC_Os06g38640|protein_coding|CODING|LOC_Os06g38640.1|1|1) FN3432-S.SNP.6:22957634 chr06:022957634 0 W/22957634-22957634 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.932427;DP=2816;DP4=1366,1339,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.90208e-13;MQSB=0.981026;RPB=0.839124;SGB=89.4385;VDB=0.335112;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.6:22966454 chr06:022966454 0 W/22966454-22966454 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.357766;DP=1721;DP4=861,822,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000492801;MQSB=0.97873;RPB=0.321168;SGB=-34.6243;VDB=0.0749155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.6:22968830 chr06:022968830 0 W/22968830-22968830 FN1687-S SNP T -> A AC=2;AN=188;BQB=0.956691;DP=3110;DP4=1771,1276,17,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.6032e-20;MQSB=0.814543;RPB=0.992688;SGB=42.5773;VDB=0.708514;EFF=UTR_3_PRIME(MODIFIER||810||157|LOC_Os06g38680|protein_coding|CODING|LOC_Os06g38680.1|1|1) FN886-S.SNP.6:22973955 chr06:022973955 0 W/22973955-22973955 FN886-S Single Base Substitution A-G INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1434-S.SNP.6:22992559 chr06:022992559 0 W/22992559-22992559 FN1434-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g38730 receptor-like protein kinase precursor, putative, expressed SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2198-S.SNP.6:23001155 chr06:023001155 0 W/23001155-23001155 FN2198-S SNP T -> C AC=1;AN=190;BQB=0.222906;DP=5197;DP4=2705,1963,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12672e-07;MQSB=0.981306;RPB=0.87256;SGB=38.983;VDB=0.320106;EFF=INTRON(MODIFIER||||148|LOC_Os06g38750|protein_coding|CODING|LOC_Os06g38750.1|1|1) FN491-S.SNP.6:23002125 chr06:023002125 0 W/23002125-23002125 FN491-S Single Base Substitution T-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN999-S.SNP.6:23005869 chr06:023005869 0 W/23005869-23005869 FN999-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g38760 retrotransposon protein, putative, unclassified, expressed SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3478-S.SNP.6:23008838 chr06:023008838 0 W/23008838-23008838 FN3478-S SNP G -> A AC=1;AN=184;BQB=0.90804;DP=2605;DP4=1258,1228,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92538e-09;MQSB=0.994337;RPB=0.905433;SGB=57.786;VDB=0.652204;EFF=INTRON(MODIFIER||||1204|LOC_Os06g38760|protein_coding|CODING|LOC_Os06g38760.1|2|1) FN_772-3-1.SNP.6:23009863 chr06:023009863 0 W/23009863-23009863 FN_772-3-1 Single Base Substitution C-G HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN-186.SNP.6:23011748 chr06:023011748 0 W/23011748-23011748 FN-186 Single Base Substitution G-A INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1639-S.SNP.6:23014506 chr06:023014506 0 W/23014506-23014506 FN1639-S Single Base Substitution A-C INTRON HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN2129-S.SNP.6:23022546 chr06:023022546 0 W/23022546-23022546 FN2129-S SNP T -> A AC=2;AN=168;BQB=0.993227;DP=2092;DP4=1078,910,22,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.80698e-20;MQSB=0.993961;RPB=0.993195;SGB=117.313;VDB=0.416761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.6:23024629 chr06:023024629 0 W/23024629-23024629 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.726849;DP=2843;DP4=1552,1175,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44977e-10;MQSB=0.946557;RPB=0.238355;SGB=36.4291;VDB=0.464054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G93S|307|LOC_Os06g38790|protein_coding|CODING|LOC_Os06g38790.1|4|1) FN3756-S.SNP.6:23024631 chr06:023024631 0 W/23024631-23024631 FN3756-S SNP G -> T AC=1;AN=190;BQB=0.992565;DP=2832;DP4=1556,1158,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.32924e-12;MQSB=0.939418;RPB=0.233945;SGB=76.4186;VDB=0.710475;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P92Q|307|LOC_Os06g38790|protein_coding|CODING|LOC_Os06g38790.1|4|1) FN1634-S.SNP.6:23037107 chr06:023037107 0 W/23037107-23037107 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2500.SNP.6:23038869 chr06:023038869 0 W/23038869-23038869 FN2500 SNP C -> T AC=1;AN=200;BQB=0.380874;DP=4890;DP4=2545,2094,13,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=5.67466e-10;MQSB=6.87767e-13;RPB=0.22341;SGB=39.9056;VDB=0.0738193;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.6:23042672 chr06:023042672 0 W/23042672-23042672 FN1563-S Single Base Substitution G-A INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1224-S.SNP.6:23043613 chr06:023043613 0 W/23043613-23043613 FN1224-S Single Base Substitution C-T INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1224-S.SNP.6:23043614 chr06:023043614 0 W/23043614-23043614 FN1224-S Single Base Substitution G-T INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN539-S.SNP.6:23060615 chr06:023060615 0 W/23060615-23060615 FN539-S Single Base Substitution C-A INTERGENIC HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN3815-S.SNP.6:23060694 chr06:023060694 0 W/23060694-23060694 FN3815-S SNP A -> G AC=1;AN=190;BQB=0.982798;DP=3479;DP4=1584,1774,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.103765;MQB=0.971791;MQSB=2.8828e-37;RPB=0.939435;SGB=44.5415;VDB=0.791805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.6:23065334 chr06:023065334 0 W/23065334-23065334 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.990262;DP=3190;DP4=1847,1210,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.92163e-11;MQSB=0.302759;RPB=0.989713;SGB=85.3253;VDB=0.208384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.6:23065677 chr06:023065677 0 W/23065677-23065677 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.0356235;DP=4723;DP4=1853,2445,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021173;MQB=0.000163935;MQSB=0.986443;RPB=0.979265;SGB=39.6545;VDB=0.269766;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.6:23067089 chr06:023067089 0 W/23067089-23067089 FN-194 Single Base Substitution T-C INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. W500-4-7-1.SNP.6:23067885 chr06:023067885 0 W/23067885-23067885 W500-4-7-1 Single Base Substitution C-T INTRON HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2161-S.SNP.6:23074349 chr06:023074349 0 W/23074349-23074349 FN2161-S SNP G -> T AC=2;AN=168;BQB=0.558733;DP=2051;DP4=739,1226,10,19;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000975134;MQB=6.74575e-06;MQSB=4.9378e-05;RPB=0.926052;SGB=-10.6335;VDB=0.460249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A825D|864|LOC_Os06g38890|protein_coding|CODING|LOC_Os06g38890.1|8|1) FN3469-S.SNP.6:23076981 chr06:023076981 0 W/23076981-23076981 FN3469-S SNP G -> A AC=2;AN=184;BQB=0.919774;DP=3230;DP4=1651,1469,16,14;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.0544892;MQB=0.825473;MQSB=1.75192e-07;RPB=0.984475;SGB=130.135;VDB=0.848389;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A299V|864|LOC_Os06g38890|protein_coding|CODING|LOC_Os06g38890.1|3|1) FN1625-S.SNP.6:23077422 chr06:023077422 0 W/23077422-23077422 FN1625-S Single Base Substitution G-A INTRON Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.6:23077422 chr06:023077422 0 W/23077422-23077422 FN1626-S SNP G -> A AC=2;AN=188;BQB=0.930863;DP=2254;DP4=1055,1136,17,18;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.03402e-06;MQSB=0.699703;RPB=0.99981;SGB=148.135;VDB=0.383142;EFF=INTRON(MODIFIER||||864|LOC_Os06g38890|protein_coding|CODING|LOC_Os06g38890.1|2|1) FN3401-S.SNP.6:23079958 chr06:023079958 0 W/23079958-23079958 FN3401-S SNP A -> T AC=1;AN=184;BQB=0.794262;DP=4083;DP4=1496,1925,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00244918;MQB=0.0286739;MQSB=0.335807;RPB=0.66185;SGB=-12.1051;VDB=0.373188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.6:23081267 chr06:023081267 0 W/23081267-23081267 FN3997-S SNP A -> T AC=2;AN=168;BQB=0.995508;DP=2440;DP4=1130,1185,14,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.46577e-14;MQSB=0.593917;RPB=0.239128;SGB=51.3545;VDB=0.295584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.6:23089254 chr06:023089254 0 W/23089254-23089254 FN2354 SNP G -> T AC=1;AN=192;BQB=0.334895;DP=7174;DP4=3703,3139,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.161834;MQB=0.385669;MQSB=0;RPB=0.135239;SGB=125.324;VDB=0.178653;EFF=INTRON(MODIFIER||||754|LOC_Os06g38920|protein_coding|CODING|LOC_Os06g38920.1|1|1) FN2354.SNP.6:23089255 chr06:023089255 0 W/23089255-23089255 FN2354 SNP A -> G AC=1;AN=192;BQB=0.988169;DP=7178;DP4=3616,3080,18,23;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.161744;MQB=0.508816;MQSB=0;RPB=0.30251;SGB=44.8992;VDB=0.378272;EFF=INTRON(MODIFIER||||754|LOC_Os06g38920|protein_coding|CODING|LOC_Os06g38920.1|1|1) FN1433-S.SNP.6:23094866 chr06:023094866 0 W/23094866-23094866 FN1433-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN3332-S.SNP.6:23095691 chr06:023095691 0 W/23095691-23095691 FN3332-S SNP A -> G AC=1;AN=184;BQB=0.655438;DP=2881;DP4=1414,1342,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13731e-07;MQSB=0.995497;RPB=0.771483;SGB=42.7914;VDB=0.528562;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K558|1137|LOC_Os06g38930|protein_coding|CODING|LOC_Os06g38930.1|1|1) FN588-S.SNP.6:23098329 chr06:023098329 0 W/23098329-23098329 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN-386.SNP.6:23105222 chr06:023105222 0 W/23105222-23105222 FN-386 Single Base Substitution T-A INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3592-S.SNP.6:23106082 chr06:023106082 0 W/23106082-23106082 FN3592-S SNP C -> T AC=1;AN=188;BQB=0.978047;DP=3063;DP4=1372,1474,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000326477;MQB=4.17657e-10;MQSB=0.596729;RPB=0.955123;SGB=36.2493;VDB=0.407746;EFF=INTRON(MODIFIER||||949|LOC_Os06g38950|protein_coding|CODING|LOC_Os06g38950.1|17|1) FN-316.SNP.6:23107233 chr06:023107233 0 W/23107233-23107233 FN-316 Single Base Substitution T-C INTRON HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-316.SNP.6:23107237 chr06:023107237 0 W/23107237-23107237 FN-316 Single Base Substitution G-A INTRON HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-139.SNP.6:23119935 chr06:023119935 0 W/23119935-23119935 FN-139 Single Base Substitution C-T INTRON HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2545-S.SNP.6:23128326 chr06:023128326 0 W/23128326-23128326 FN2545-S SNP A -> C AC=1;AN=198;BQB=0.925269;DP=4522;DP4=2295,2002,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35074e-09;MQSB=0.983085;RPB=0.953449;SGB=72.5245;VDB=0.862681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.6:23137542 chr06:023137542 0 W/23137542-23137542 FN2784-S SNP T -> A AC=1;AN=198;BQB=0.895195;DP=4686;DP4=2282,2206,19,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.18021e-17;MQSB=0.909663;RPB=0.958206;SGB=127.666;VDB=0.358627;EFF=INTRON(MODIFIER||||670|LOC_Os06g38980|protein_coding|CODING|LOC_Os06g38980.1|6|1) FN1274-S.SNP.6:23142911 chr06:023142911 0 W/23142911-23142911 FN1274-S Single Base Substitution C-T INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN425-S.SNP.6:23143062 chr06:023143062 0 W/23143062-23143062 FN425-S Single Base Substitution A-G INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN3500-S.SNP.6:23144007 chr06:023144007 0 W/23144007-23144007 FN3500-S SNP C -> A AC=1;AN=188;BQB=0.99684;DP=3253;DP4=1757,1383,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.96262e-08;MQSB=0.934012;RPB=0.991996;SGB=58.0655;VDB=0.0455053;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.6:23157363 chr06:023157363 0 W/23157363-23157363 FN3693-S SNP A -> G AC=1;AN=190;BQB=0.899238;DP=2614;DP4=1170,1311,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92932e-06;MQSB=0.916473;RPB=0.993312;SGB=36.1006;VDB=0.855572;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.6:23163144 chr06:023163144 0 W/23163144-23163144 FN695-S Single Base Substitution G-C INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2279-S.SNP.6:23166144 chr06:023166144 0 W/23166144-23166144 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.464314;DP=4248;DP4=1909,1999,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000235405;MQB=2.09956e-16;MQSB=0.914692;RPB=0.995795;SGB=107.178;VDB=0.849232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R1278C|1422|LOC_Os06g39020|protein_coding|CODING|LOC_Os06g39020.1|3|1) FN2279-S.SNP.6:23166160 chr06:023166160 0 W/23166160-23166160 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.777767;DP=4127;DP4=1847,1927,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000242307;MQB=3.06013e-18;MQSB=0.845495;RPB=0.677327;SGB=131.065;VDB=0.553624;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1272|1422|LOC_Os06g39020|protein_coding|CODING|LOC_Os06g39020.1|3|1) FN1197-S.SNP.6:23167862 chr06:023167862 0 W/23167862-23167862 FN1197-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g39020 retrotransposon protein, putative, unclassified, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. CW-631-3-1.SNP.6:23186122 chr06:023186122 0 W/23186122-23186122 CW-631-3-1 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN530-S.SNP.6:23187259 chr06:023187259 0 W/23187259-23187259 FN530-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN530-S.SNP.6:23187260 chr06:023187260 0 W/23187260-23187260 FN530-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN543-S.SNP.6:23188725 chr06:023188725 0 W/23188725-23188725 FN543-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g39060 glucan endo-1,3-beta-glucosidase precursor, putative, expressed SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN4071-S.SNP.6:23189394 chr06:023189394 0 W/23189394-23189394 FN4071-S SNP T -> C AC=2;AN=182;BQB=0.94837;DP=2539;DP4=1182,1289,12,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.31382e-12;MQSB=0.923611;RPB=0.903684;SGB=80.1982;VDB=0.840527;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.6:23190926 chr06:023190926 0 W/23190926-23190926 FN2656-S SNP C -> A AC=1;AN=200;BQB=0.994579;DP=5071;DP4=2706,2031,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25069e-19;MQSB=0.801626;RPB=0.640812;SGB=108.768;VDB=0.115147;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.6:23200293 chr06:023200293 0 W/23200293-23200293 FN-133 Single Base Substitution C-A INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN622-S.SNP.6:23204434 chr06:023204434 0 W/23204434-23204434 FN622-S Single Base Substitution C-A INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN1464-S.SNP.6:23206315 chr06:023206315 0 W/23206315-23206315 FN1464-S Single Base Substitution C-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-17.SNP.6:23207286 chr06:023207286 0 W/23207286-23207286 FN-17 Single Base Substitution T-C INTRON Homo SNo: 17, Mutant_ID: FN-17, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN4011-S.SNP.6:23218765 chr06:023218765 0 W/23218765-23218765 FN4011-S SNP G -> A AC=2;AN=168;BQB=0.521451;DP=2574;DP4=1056,1394,16,15;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.33985e-09;MQSB=8.85848e-07;RPB=0.923571;SGB=131.927;VDB=0.120483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.6:23222505 chr06:023222505 0 W/23222505-23222505 FN2286 SNP C -> T AC=1;AN=192;BQB=0.989998;DP=5032;DP4=2270,2464,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.64132e-11;MQSB=0.517958;RPB=0.817284;SGB=-9.68954;VDB=0.653606;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.6:23222769 chr06:023222769 0 W/23222769-23222769 FN3896-S SNP T -> C AC=1;AN=158;BQB=0.941186;DP=2166;DP4=872,1214,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.46449e-05;MQSB=0.980953;RPB=0.983582;SGB=33.9591;VDB=0.897184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.6:23225288 chr06:023225288 0 W/23225288-23225288 FN2488 SNP T -> C AC=2;AN=200;BQB=0.761716;DP=4278;DP4=1967,2052,20,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01737e-25;MQSB=0.619845;RPB=0.986168;SGB=155.635;VDB=0.208641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.6:23230983 chr06:023230983 0 W/23230983-23230983 FN3817-S SNP C -> G AC=2;AN=190;BQB=0.993063;DP=2435;DP4=1039,1258,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.24138e-11;MQSB=0.847258;RPB=0.782568;SGB=85.5263;VDB=0.301677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.6:23289365 chr06:023289365 0 W/23289365-23289365 FN1265-S Single Base Substitution G-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2129-S.SNP.6:23292428 chr06:023292428 0 W/23292428-23292428 FN2129-S SNP A -> G AC=2;AN=168;BQB=0.979425;DP=3562;DP4=2041,1430,53,21;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=3.36734e-17;MQSB=0.273238;RPB=0.474398;SGB=192.775;VDB=0.847139;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.6:23301005 chr06:023301005 0 W/23301005-23301005 FN1133-S Single Base Substitution G-T INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2380.SNP.6:23302440 chr06:023302440 0 W/23302440-23302440 FN2380 SNP C -> T AC=1;AN=192;BQB=0.80533;DP=4699;DP4=1893,2462,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.91992e-05;MQSB=0.980377;RPB=0.914413;SGB=-33.5852;VDB=0.609329;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.6:23303022 chr06:023303022 0 W/23303022-23303022 FN1420-S Single Base Substitution G-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2218-S.SNP.6:23307621 chr06:023307621 0 W/23307621-23307621 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.80719;DP=4984;DP4=2319,2265,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.50987e-05;MQSB=0.140022;RPB=0.554056;SGB=39.6545;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.6:23317818 chr06:023317818 0 W/23317818-23317818 FN2358 SNP T -> G AC=2;AN=192;BQB=0.133549;DP=4903;DP4=2186,2451,18,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.45068e-24;MQSB=0.731871;RPB=0.74584;SGB=143.146;VDB=0.0860832;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.6:23321201 chr06:023321201 0 W/23321201-23321201 FN1718-S SNP C -> G AC=1;AN=188;BQB=0.591939;DP=2226;DP4=1034,1153,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.194352;MQSB=0.000531359;RPB=0.401517;SGB=8.27326;VDB=0.149896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.6:23321809 chr06:023321809 0 W/23321809-23321809 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.419872;DP=4015;DP4=1948,1837,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.65322e-10;MQSB=0.92967;RPB=0.997026;SGB=83.2905;VDB=0.5688;EFF=INTRON(MODIFIER||||588|LOC_Os06g39300|protein_coding|CODING|LOC_Os06g39300.1|1|1) FN-222.SNP.6:23337243 chr06:023337243 0 W/23337243-23337243 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3464-S.SNP.6:23340508 chr06:023340508 0 W/23340508-23340508 FN3464-S SNP G -> T AC=2;AN=184;BQB=0.942903;DP=2737;DP4=1055,1587,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.03342e-14;MQSB=0.986276;RPB=0.919653;SGB=93.9603;VDB=0.0621949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.6:23354319 chr06:023354319 0 W/23354319-23354319 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.0771012;DP=4132;DP4=2051,2036,18,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000242014;MQB=1.74707e-11;MQSB=0.999863;RPB=0.992639;SGB=-76.4696;VDB=0.865005;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.6:23360705 chr06:023360705 0 W/23360705-23360705 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN890-S.SNP.6:23360724 chr06:023360724 0 W/23360724-23360724 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2361.SNP.6:23362436 chr06:023362436 0 W/23362436-23362436 FN2361 SNP A -> T AC=2;AN=192;BQB=0.0369387;DP=4979;DP4=2149,2427,24,35;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=4.79293e-21;MQSB=0.0203445;RPB=0.302145;SGB=9.4983;VDB=0.285073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.6:23364101 chr06:023364101 0 W/23364101-23364101 FN2478 SNP G -> A AC=1;AN=200;BQB=0.214628;DP=4773;DP4=2112,2360,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.96528e-10;MQSB=0.776392;RPB=0.996587;SGB=69.1109;VDB=0.617644;EFF=INTERGENIC(MODIFIER||||||||||1) FN-294.SNP.6:23376334 chr06:023376334 0 W/23376334-23376334 FN-294 Single Base Substitution T-A INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN696-S.SNP.6:23397452 chr06:023397452 0 W/23397452-23397452 FN696-S Single Base Substitution C-T INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-182.SNP.6:23401210 chr06:023401210 0 W/23401210-23401210 FN-182 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g39410 expressed protein SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-182.SNP.6:23401211 chr06:023401211 0 W/23401211-23401211 FN-182 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g39410 expressed protein SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3982-S.SNP.6:23437248 chr06:023437248 0 W/23437248-23437248 FN3982-S SNP G -> C AC=1;AN=168;BQB=0.989259;DP=2661;DP4=1012,1458,2,7;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0;MQB=0.0215907;MQSB=0.000228261;RPB=0.843392;SGB=21.0249;VDB=0.449235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.6:23439393 chr06:023439393 0 W/23439393-23439393 FN1413-S Single Base Substitution A-G INTRON HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3935-S.SNP.6:23441143 chr06:023441143 0 W/23441143-23441143 FN3935-S SNP A -> T AC=1;AN=158;BQB=0.99965;DP=1628;DP4=899,647,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0;MQB=0.0503688;MQSB=0.0756845;RPB=0.889571;SGB=60.1755;VDB=0.00218995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3542-S.SNP.6:23447455 chr06:023447455 0 W/23447455-23447455 FN3542-S SNP T -> C AC=2;AN=188;BQB=0.604938;DP=2701;DP4=1226,1296,12,8;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0;MQB=5.77341e-05;MQSB=0.896955;RPB=0.41957;SGB=36.2493;VDB=0.21378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N188S|695|LOC_Os06g39480|protein_coding|CODING|LOC_Os06g39480.1|3|1) FN1446-S.SNP.6:23454462 chr06:023454462 0 W/23454462-23454462 FN1446-S Single Base Substitution C-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN-333.SNP.6:23457275 chr06:023457275 0 W/23457275-23457275 FN-333 Single Base Substitution C-T INTERGENIC HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN944-S.SNP.6:23457760 chr06:023457760 0 W/23457760-23457760 FN944-S Single Base Substitution C-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN-139.SNP.6:23471549 chr06:023471549 0 W/23471549-23471549 FN-139 Single Base Substitution A-C UTR_3_PRIME HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3665-S.SNP.6:23493382 chr06:023493382 0 W/23493382-23493382 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.995972;DP=2615;DP4=1271,1227,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=9.11012e-07;MQSB=0.505472;RPB=0.919548;SGB=126.511;VDB=0.564552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.6:23494403 chr06:023494403 0 W/23494403-23494403 FN-147 Single Base Substitution A-G INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN1282-S.SNP.6:23495551 chr06:023495551 0 W/23495551-23495551 FN1282-S Single Base Substitution G-A INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1424-S.SNP.6:23503381 chr06:023503381 0 W/23503381-23503381 FN1424-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1402-S.SNP.6:23511530 chr06:023511530 0 W/23511530-23511530 FN1402-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1316-S.SNP.6:23515566 chr06:023515566 0 W/23515566-23515566 FN1316-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1316-S.SNP.6:23515567 chr06:023515567 0 W/23515567-23515567 FN1316-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN-309.SNP.6:23516365 chr06:023516365 0 W/23516365-23516365 FN-309 Single Base Substitution A-C INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-176.SNP.6:23562468 chr06:023562468 0 W/23562468-23562468 FN-176 Single Base Substitution T-A INTRON HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN1543-S.SNP.6:23594063 chr06:023594063 0 W/23594063-23594063 FN1543-S Single Base Substitution C-T INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN2244-S.SNP.6:23610985 chr06:023610985 0 W/23610985-23610985 FN2244-S SNP G -> T AC=2;AN=190;BQB=0.0897181;DP=5150;DP4=2617,2255,18,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.61446e-12;MQSB=0.900024;RPB=0.616169;SGB=22.7576;VDB=0.475553;EFF=UTR_3_PRIME(MODIFIER||260||519|LOC_Os06g39750|protein_coding|CODING|LOC_Os06g39750.3|2|1),UTR_3_PRIME(MODIFIER||260||519|LOC_Os06g39750|protein_coding|CODING|LOC_Os06g39750.1|2|1),UTR_3_PRIME(MODIFIER||260||519|LOC_Os06g39750|protein_coding|CODING|LOC_Os06g39750.2|2|1) FN3417-S.SNP.6:23618203 chr06:023618203 0 W/23618203-23618203 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.968896;DP=2508;DP4=1268,1160,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51677e-07;MQSB=0.870242;RPB=0.875575;SGB=32.2261;VDB=0.892694;EFF=INTRON(MODIFIER||||345|LOC_Os06g39760|protein_coding|CODING|LOC_Os06g39760.1|1|1) FN-158.SNP.6:23619981 chr06:023619981 0 W/23619981-23619981 FN-158 Single Base Substitution G-A INTRON HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1243-S.SNP.6:23627902 chr06:023627902 0 W/23627902-23627902 FN1243-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2683-S.SNP.6:23629529 chr06:023629529 0 W/23629529-23629529 FN2683-S SNP A -> T AC=1;AN=200;BQB=0.957334;DP=4556;DP4=2329,2037,5,9;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0;MQB=0.297577;MQSB=0.19363;RPB=0.047265;SGB=21.6694;VDB=0.286369;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.6:23633356 chr06:023633356 0 W/23633356-23633356 FN549-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g39780 cytochrome P450, putative, expressed SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2434.SNP.6:23640339 chr06:023640339 0 W/23640339-23640339 FN2434 SNP T -> C AC=1;AN=200;BQB=0.913734;DP=4709;DP4=2340,2139,10,1;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.68448e-05;MQSB=0.000438126;RPB=0.290158;SGB=29.4541;VDB=0.5837;EFF=INTRON(MODIFIER||||994|LOC_Os06g39790|protein_coding|CODING|LOC_Os06g39790.1|7|1) FN4017-S.SNP.6:23640427 chr06:023640427 0 W/23640427-23640427 FN4017-S SNP A -> G AC=2;AN=168;BQB=0.989473;DP=2522;DP4=1196,1215,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28184e-15;MQSB=0.959669;RPB=0.954199;SGB=53.7853;VDB=0.740667;EFF=INTRON(MODIFIER||||994|LOC_Os06g39790|protein_coding|CODING|LOC_Os06g39790.1|7|1) FN2195-S.SNP.6:23655495 chr06:023655495 0 W/23655495-23655495 FN2195-S SNP T -> C AC=1;AN=190;BQB=0.640584;DP=4701;DP4=2042,2415,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000212721;MQB=1.4409e-05;MQSB=4.87298e-05;RPB=0.0304197;SGB=46.7622;VDB=0.548672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.6:23658054 chr06:023658054 0 W/23658054-23658054 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.870213;DP=4149;DP4=1960,1963,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=7.84136e-08;MQSB=0.015088;RPB=0.290079;SGB=34.5346;VDB=0.579247;EFF=INTRON(MODIFIER||||1128|LOC_Os06g39820|protein_coding|CODING|LOC_Os06g39820.1|2|1) FN1633-S.SNP.6:23659070 chr06:023659070 0 W/23659070-23659070 FN1633-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g39820 retrotransposon protein, putative, unclassified, expressed SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN708-S.SNP.6:23676060 chr06:023676060 0 W/23676060-23676060 FN708-S Single Base Substitution T-C INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2662-S.SNP.6:23681481 chr06:023681481 0 W/23681481-23681481 FN2662-S SNP T -> C AC=1;AN=200;BQB=0.89618;DP=4717;DP4=1993,2445,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13235e-06;MQSB=0.983976;RPB=0.997229;SGB=-55.5209;VDB=0.674722;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.6:23682410 chr06:023682410 0 W/23682410-23682410 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.658011;DP=2364;DP4=1132,1176,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.34477e-08;MQSB=0.991346;RPB=0.947928;SGB=53.1331;VDB=0.876614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.6:23683360 chr06:023683360 0 W/23683360-23683360 FN2085-S SNP G -> A AC=2;AN=168;BQB=0.98976;DP=4064;DP4=1931,2046,33,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00123031;MQB=2.81809e-35;MQSB=0.999245;RPB=0.990877;SGB=74.3007;VDB=0.221742;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.6:23688525 chr06:023688525 0 W/23688525-23688525 FN4063-S SNP A -> T AC=2;AN=168;BQB=0.834502;DP=2566;DP4=1254,1178,12,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.03029e-12;MQSB=0.978899;RPB=0.0224918;SGB=36.7696;VDB=0.144567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.6:23692887 chr06:023692887 0 W/23692887-23692887 FN3712-S SNP A -> C AC=1;AN=190;BQB=0.973259;DP=2989;DP4=1381,1449,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00033456;MQB=3.02343e-13;MQSB=0.622579;RPB=0.656766;SGB=112.85;VDB=0.853364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.6:23698637 chr06:023698637 0 W/23698637-23698637 FN3482-S SNP G -> A AC=1;AN=184;BQB=0.966175;DP=2908;DP4=1422,1399,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15022e-12;MQSB=0.977473;RPB=0.79718;SGB=56.8786;VDB=0.826909;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.6:23698638 chr06:023698638 0 W/23698638-23698638 FN3482-S SNP G -> A AC=1;AN=184;BQB=0.90725;DP=2906;DP4=1438,1406,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10503e-12;MQSB=0.994135;RPB=0.428708;SGB=56.8786;VDB=0.75435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.6:23709709 chr06:023709709 0 W/23709709-23709709 FN1465-S Single Base Substitution C-T INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1622-S.SNP.6:23713889 chr06:023713889 0 W/23713889-23713889 FN1622-S Single Base Substitution G-A INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2081-S.SNP.6:23719238 chr06:023719238 0 W/23719238-23719238 FN2081-S SNP T -> A AC=2;AN=168;BQB=0.632514;DP=3710;DP4=1758,1882,20,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.9439e-17;MQSB=0.980432;RPB=0.63143;SGB=-7.187;VDB=0.228258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.6:23719239 chr06:023719239 0 W/23719239-23719239 FN2081-S SNP G -> A AC=2;AN=168;BQB=0.944903;DP=3688;DP4=1753,1864,17,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.31011e-19;MQSB=0.992462;RPB=0.38515;SGB=31.3762;VDB=0.333619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.6:23723340 chr06:023723340 0 W/23723340-23723340 FN1419-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2209-S.SNP.6:23724194 chr06:023724194 0 W/23724194-23724194 FN2209-S SNP T -> A AC=2;AN=190;BQB=0.624394;DP=5143;DP4=2430,2374,29,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.46558e-30;MQSB=0.922514;RPB=0.985752;SGB=120.707;VDB=0.264157;EFF=UTR_3_PRIME(MODIFIER||166||402|LOC_Os06g39900|protein_coding|CODING|LOC_Os06g39900.1|3|1),INTRON(MODIFIER||||300|LOC_Os06g39900|protein_coding|CODING|LOC_Os06g39900.2|3|1),INTRON(MODIFIER||||300|LOC_Os06g39900|protein_coding|CODING|LOC_Os06g39900.3|3|1) FN2385.SNP.6:23731229 chr06:023731229 0 W/23731229-23731229 FN2385 SNP G -> C AC=1;AN=192;BQB=0.341788;DP=4693;DP4=2497,1957,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.98545e-05;MQSB=0.993591;RPB=0.998401;SGB=-14.7687;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.6:23731232 chr06:023731232 0 W/23731232-23731232 FN1707-S SNP G -> T AC=1;AN=188;BQB=0.0457847;DP=2448;DP4=850,1567,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.001216;MQSB=0.772631;RPB=0.977243;SGB=25.3545;VDB=0.643502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.6:23731550 chr06:023731550 0 W/23731550-23731550 FN2719-S SNP C -> A AC=1;AN=200;BQB=0.984486;DP=4712;DP4=2163,2249,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03322e-07;MQSB=0.998865;RPB=0.783279;SGB=29.4541;VDB=0.861992;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.6:23737187 chr06:023737187 0 W/23737187-23737187 FN4142-S SNP C -> A AC=2;AN=170;BQB=0.36328;DP=2835;DP4=1260,1456,28,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.09862e-22;MQSB=0.84423;RPB=0.990708;SGB=110.616;VDB=0.227597;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D73E|149|LOC_Os06g39912|protein_coding|CODING|LOC_Os06g39912.1|1|1),INTRON(MODIFIER||||112|LOC_Os06g39912|protein_coding|CODING|LOC_Os06g39912.2|1|1) FN4142-S.SNP.6:23737194 chr06:023737194 0 W/23737194-23737194 FN4142-S SNP G -> A AC=2;AN=170;BQB=0.95099;DP=2778;DP4=1243,1412,26,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.77535e-20;MQSB=0.839879;RPB=0.59443;SGB=136.725;VDB=0.227768;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E76K|149|LOC_Os06g39912|protein_coding|CODING|LOC_Os06g39912.1|1|1),INTRON(MODIFIER||||112|LOC_Os06g39912|protein_coding|CODING|LOC_Os06g39912.2|1|1) FN2739-S.SNP.6:23738007 chr06:023738007 0 W/23738007-23738007 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.909206;DP=4739;DP4=2348,2085,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.53341e-13;MQSB=0.66562;RPB=0.464867;SGB=65.5058;VDB=0.878458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.6:23739862 chr06:023739862 0 W/23739862-23739862 FN3435-S SNP C -> T AC=1;AN=184;BQB=0.973176;DP=3029;DP4=1531,1383,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07197e-06;MQSB=0.94823;RPB=0.956887;SGB=35.1773;VDB=0.561963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.6:23739867 chr06:023739867 0 W/23739867-23739867 FN3435-S SNP T -> A AC=1;AN=184;BQB=0.56597;DP=3012;DP4=1488,1380,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.75916e-06;MQSB=0.990814;RPB=0.943764;SGB=15.7097;VDB=0.86052;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.6:23741158 chr06:023741158 0 W/23741158-23741158 FN-307 Single Base Substitution C-T INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1470-S.SNP.6:23747039 chr06:023747039 0 W/23747039-23747039 FN1470-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g39920 retrotransposon protein, putative, unclassified, expressed SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2278-S.SNP.6:23748188 chr06:023748188 0 W/23748188-23748188 FN2278-S SNP G -> A AC=1;AN=190;BQB=0.0418012;DP=7370;DP4=3962,2960,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.239077;MQB=0.286249;MQSB=0;RPB=0.724315;SGB=85.8548;VDB=0.8111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.6:23749819 chr06:023749819 0 W/23749819-23749819 FN1042-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g39930 retrotransposon protein, putative, unclassified, expressed SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2436.SNP.6:23754529 chr06:023754529 0 W/23754529-23754529 FN2436 SNP A -> G AC=2;AN=200;BQB=0.532085;DP=3674;DP4=1353,1787,25,19;HOB=0.0198;ICB=0.495051;MQ=21;MQ0F=0.237616;MQB=0.159427;MQSB=0.28387;RPB=0.847021;SGB=-94.5761;VDB=0.536392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N1999D|2011|LOC_Os06g39930|protein_coding|CODING|LOC_Os06g39930.1|3|1) FN1443-S.SNP.6:23767627 chr06:023767627 0 W/23767627-23767627 FN1443-S Single Base Substitution C-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN343-S.SNP.6:23771815 chr06:023771815 0 W/23771815-23771815 FN343-S Single Base Substitution T-C INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN4142-S.SNP.6:23783998 chr06:023783998 0 W/23783998-23783998 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.911326;DP=2580;DP4=1396,1069,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.02279e-07;MQSB=0.336782;RPB=0.995622;SGB=22.3266;VDB=0.754234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.6:23784885 chr06:023784885 0 W/23784885-23784885 FN1170-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2545-S.SNP.6:23784885 chr06:023784885 0 W/23784885-23784885 FN2545-S SNP T -> A AC=1;AN=198;BQB=0.985819;DP=4347;DP4=2027,2093,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19158e-06;MQSB=0.96859;RPB=0.0781227;SGB=2.96892;VDB=0.0714772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.6:23784885 chr06:023784885 0 W/23784885-23784885 FN3983-S SNP T -> A AC=2;AN=168;BQB=0.94453;DP=2646;DP4=1322,1229,8,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.42881e-09;MQSB=0.730028;RPB=0.987779;SGB=-39.5049;VDB=0.0488887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.6:23790454 chr06:023790454 0 W/23790454-23790454 FN3553-S SNP C -> A AC=2;AN=188;BQB=0.350082;DP=3475;DP4=1721,1677,15,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.51785e-13;MQSB=0.749901;RPB=0.898925;SGB=139.845;VDB=0.992799;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A354E|596|LOC_Os06g39990|protein_coding|CODING|LOC_Os06g39990.1|2|1) FN544-S.SNP.6:23794563 chr06:023794563 0 W/23794563-23794563 FN544-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g40000 retrotransposon protein, putative, unclassified, expressed SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN997-S.SNP.6:23794917 chr06:023794917 0 W/23794917-23794917 FN997-S Single Base Substitution G-A INTRON HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN4133-S.SNP.6:23795282 chr06:023795282 0 W/23795282-23795282 FN4133-S SNP G -> A AC=1;AN=182;BQB=0.823576;DP=2997;DP4=1143,1762,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.23215e-05;MQSB=0.490644;RPB=0.997963;SGB=28.6061;VDB=0.293805;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.6:23796328 chr06:023796328 0 W/23796328-23796328 FN4147-S SNP T -> G AC=1;AN=170;BQB=0.738181;DP=2149;DP4=1045,1030,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=28;MQ0F=0.208934;MQB=0.258111;MQSB=5.45252e-08;RPB=0.699659;SGB=34.878;VDB=0.739426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.6:23798706 chr06:023798706 0 W/23798706-23798706 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.771854;DP=4447;DP4=2196,1933,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51578e-09;MQSB=0.301724;RPB=0.697696;SGB=50.3161;VDB=0.480398;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.6:23800533 chr06:023800533 0 W/23800533-23800533 FN897-S Single Base Substitution C-A INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN486-S.SNP.6:23800688 chr06:023800688 0 W/23800688-23800688 FN486-S Single Base Substitution T-A INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3758-S.SNP.6:23801288 chr06:023801288 0 W/23801288-23801288 FN3758-S SNP T -> G AC=1;AN=190;BQB=0.903342;DP=3374;DP4=1605,1581,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00474215;MQB=0.00195191;MQSB=0.252845;RPB=0.98715;SGB=18.552;VDB=0.65348;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.6:23802982 chr06:023802982 0 W/23802982-23802982 FN4081-S SNP G -> A AC=1;AN=182;BQB=0.722636;DP=2915;DP4=1499,1335,11,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.07262e-10;MQSB=0.971435;RPB=0.155052;SGB=71.1765;VDB=0.694485;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.6:23803414 chr06:023803414 0 W/23803414-23803414 FN-231 Single Base Substitution C-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN3867-S.SNP.6:23808056 chr06:023808056 0 W/23808056-23808056 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.955173;DP=2453;DP4=1213,1147,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.28957e-06;MQSB=0.901511;RPB=0.852263;SGB=23.9652;VDB=0.790812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R74S|478|LOC_Os06g40020|protein_coding|CODING|LOC_Os06g40020.1|2|1) FN3867-S.SNP.6:23808057 chr06:023808057 0 W/23808057-23808057 FN3867-S SNP G -> T AC=1;AN=158;BQB=0.985091;DP=2461;DP4=1214,1184,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.6378e-06;MQSB=0.92744;RPB=0.854512;SGB=29.5899;VDB=0.681298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V75F|478|LOC_Os06g40020|protein_coding|CODING|LOC_Os06g40020.1|2|1) FN-197.SNP.6:23811637 chr06:023811637 0 W/23811637-23811637 FN-197 Single Base Substitution C-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN4032-S.SNP.6:23814179 chr06:023814179 0 W/23814179-23814179 FN4032-S SNP A -> T AC=2;AN=168;BQB=0.52361;DP=2477;DP4=1212,1140,21,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.9466e-20;MQSB=0.923558;RPB=0.966827;SGB=157.753;VDB=0.88001;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L288*|813|LOC_Os06g40030|protein_coding|CODING|LOC_Os06g40030.1|1|1) FN824-S.SNP.6:23820026 chr06:023820026 0 W/23820026-23820026 FN824-S Single Base Substitution A-C INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1334-S.SNP.6:23825629 chr06:023825629 0 W/23825629-23825629 FN1334-S Single Base Substitution G-C INTRON HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2274-S.SNP.6:23825898 chr06:023825898 0 W/23825898-23825898 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.539296;DP=4842;DP4=2066,2415,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.43363e-12;MQSB=0.194103;RPB=0.312745;SGB=51.7524;VDB=0.659577;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L132|423|LOC_Os06g40050|protein_coding|CODING|LOC_Os06g40050.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L132|423|LOC_Os06g40050|protein_coding|CODING|LOC_Os06g40050.2|1|1) FN2640-S.SNP.6:23826380 chr06:023826380 0 W/23826380-23826380 FN2640-S SNP C -> G AC=2;AN=200;BQB=0.515829;DP=5108;DP4=2558,2252,30,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.66025e-35;MQSB=0.896088;RPB=0.572413;SGB=275.313;VDB=0.621482;EFF=UTR_5_PRIME(MODIFIER||89||423|LOC_Os06g40050|protein_coding|CODING|LOC_Os06g40050.2|1|1),INTRON(MODIFIER||||423|LOC_Os06g40050|protein_coding|CODING|LOC_Os06g40050.1|1|1) FN2612-S.SNP.6:23833439 chr06:023833439 0 W/23833439-23833439 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.886329;DP=3742;DP4=1967,1530,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.30824e-07;MQSB=0.999663;RPB=0.310868;SGB=50.9344;VDB=0.636869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.6:23833534 chr06:023833534 0 W/23833534-23833534 FN1085-S Single Base Substitution G-A INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3517-S.SNP.6:23833971 chr06:023833971 0 W/23833971-23833971 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.977044;DP=2923;DP4=1488,1378,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10825e-09;MQSB=0.951644;RPB=0.605628;SGB=62.6088;VDB=0.142842;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.6:23833971 chr06:023833971 0 W/23833971-23833971 FN_N1-220-1 Single Base Substitution C-T Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN2218-S.SNP.6:23834322 chr06:023834322 0 W/23834322-23834322 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.876156;DP=4403;DP4=1982,2043,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000227118;MQB=4.59697e-13;MQSB=0.00229462;RPB=0.880678;SGB=-7.68321;VDB=0.277949;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.6:23838147 chr06:023838147 0 W/23838147-23838147 FN795-S Single Base Substitution A-T INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1282-S.SNP.6:23858296 chr06:023858296 0 W/23858296-23858296 FN1282-S Single Base Substitution A-G INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1228-S.SNP.6:23862373 chr06:023862373 0 W/23862373-23862373 FN1228-S Single Base Substitution T-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2086-S.SNP.6:23863550 chr06:023863550 0 W/23863550-23863550 FN2086-S SNP C -> G AC=2;AN=168;BQB=0.906051;DP=3576;DP4=1353,2121,22,42;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.86971e-32;MQSB=0.953071;RPB=0.328233;SGB=90.6509;VDB=0.154783;EFF=UTR_3_PRIME(MODIFIER||263||204|LOC_Os06g40090|protein_coding|CODING|LOC_Os06g40090.1|1|1) FN1423-S.SNP.6:23865116 chr06:023865116 0 W/23865116-23865116 FN1423-S Single Base Substitution G-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3899-S.SNP.6:23866353 chr06:023866353 0 W/23866353-23866353 FN3899-S SNP C -> T AC=1;AN=158;BQB=0.75816;DP=2649;DP4=1032,1535,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.50982e-05;MQSB=0.973504;RPB=0.306815;SGB=47.0672;VDB=0.493819;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.6:23881947 chr06:023881947 0 W/23881947-23881947 FN1062-S Single Base Substitution C-G INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1154-S.SNP.6:23884393 chr06:023884393 0 W/23884393-23884393 FN1154-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2430.SNP.6:23885158 chr06:023885158 0 W/23885158-23885158 FN2430 SNP G -> A AC=1;AN=200;BQB=0.935318;DP=4443;DP4=2190,1830,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57267e-05;MQSB=0.49814;RPB=0.93776;SGB=16.4591;VDB=0.172273;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.6:23888461 chr06:023888461 0 W/23888461-23888461 FN-220 Single Base Substitution A-T INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN1265-S.SNP.6:23895900 chr06:023895900 0 W/23895900-23895900 FN1265-S Single Base Substitution G-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3667-S.SNP.6:23910889 chr06:023910889 0 W/23910889-23910889 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.992102;DP=2928;DP4=1514,1300,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0292e-07;MQSB=0.818323;RPB=0.525223;SGB=44.5415;VDB=0.861992;EFF=INTRON(MODIFIER||||832|LOC_Os06g40170|protein_coding|CODING|LOC_Os06g40170.1|2|1) FN3311-S.SNP.6:23934985 chr06:023934985 0 W/23934985-23934985 FN3311-S Single Base Substitution C-A INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3859-S.SNP.6:23942246 chr06:023942246 0 W/23942246-23942246 FN3859-S SNP T -> A AC=1;AN=158;BQB=0.46483;DP=2803;DP4=1319,1370,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1959e-05;MQSB=0.985412;RPB=0.380041;SGB=14.3409;VDB=0.796736;EFF=UTR_3_PRIME(MODIFIER||2188||515|LOC_Os06g40200|protein_coding|CODING|LOC_Os06g40200.2|4|1),UTR_3_PRIME(MODIFIER||2188||515|LOC_Os06g40200|protein_coding|CODING|LOC_Os06g40200.1|5|1) FN1552-S.SNP.6:23942487 chr06:023942487 0 W/23942487-23942487 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.549927;DP=3340;DP4=1486,1821,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.34281e-09;MQSB=0.976485;RPB=0.962502;SGB=8.62479;VDB=0.654423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.6:23946875 chr06:023946875 0 W/23946875-23946875 FN3670-S SNP G -> C AC=1;AN=190;BQB=0.792212;DP=3051;DP4=1280,1589,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63867e-05;MQSB=0.894928;RPB=0.65038;SGB=10.8904;VDB=0.0941614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.6:23947295 chr06:023947295 0 W/23947295-23947295 FN3945-S SNP T -> C AC=1;AN=168;BQB=0.926823;DP=2607;DP4=1263,1138,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8538e-08;MQSB=0.835518;RPB=0.745759;SGB=22.1847;VDB=0.645277;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.6:23948148 chr06:023948148 0 W/23948148-23948148 FN785-S Single Base Substitution T-A INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1642-S.SNP.6:23951540 chr06:023951540 0 W/23951540-23951540 FN1642-S Single Base Substitution G-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-153.SNP.6:23952843 chr06:023952843 0 W/23952843-23952843 FN-153 Single Base Substitution G-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1050-S.SNP.6:23953686 chr06:023953686 0 W/23953686-23953686 FN1050-S Single Base Substitution C-T INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1515-S.SNP.6:23958563 chr06:023958563 0 W/23958563-23958563 FN1515-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1515-S.SNP.6:23958564 chr06:023958564 0 W/23958564-23958564 FN1515-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g40220 OsFBX199 - F-box domain containing protein, expressed SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2686-S.SNP.6:24004931 chr06:024004931 0 W/24004931-24004931 FN2686-S SNP G -> A AC=2;AN=200;BQB=0.999978;DP=5001;DP4=2542,2185,15,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.63381e-16;MQSB=0.894793;RPB=0.989487;SGB=114.132;VDB=0.203028;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.6:24006581 chr06:024006581 0 W/24006581-24006581 FN950-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g40330 MYB family transcription factor, putative, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2471.SNP.6:24027077 chr06:024027077 0 W/24027077-24027077 FN2471 SNP G -> A AC=1;AN=200;BQB=0.259186;DP=4887;DP4=2466,2070,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.1443e-15;MQSB=0.545771;RPB=0.238433;SGB=28.752;VDB=0.965158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.6:24030586 chr06:024030586 0 W/24030586-24030586 FN2178-S SNP G -> T AC=1;AN=168;BQB=0.0998296;DP=4103;DP4=1886,2172,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19606e-07;MQSB=0.968052;RPB=0.94316;SGB=-90.3546;VDB=0.0854341;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.6:24031540 chr06:024031540 0 W/24031540-24031540 FN1036-S Single Base Substitution A-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN3442-S.SNP.6:24039658 chr06:024039658 0 W/24039658-24039658 FN3442-S SNP G -> A AC=2;AN=184;BQB=0.975869;DP=2550;DP4=1170,1314,6,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.01661e-11;MQSB=0.872587;RPB=0.125073;SGB=75.8731;VDB=0.240374;EFF=INTRON(MODIFIER||||453|LOC_Os06g40370|protein_coding|CODING|LOC_Os06g40370.1|13|1) FN1748-S.SNP.6:24040775 chr06:024040775 0 W/24040775-24040775 FN1748-S SNP C -> T AC=1;AN=188;BQB=0.731804;DP=3713;DP4=1983,1681,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10348e-16;MQSB=0.998789;RPB=0.410206;SGB=-6.30704;VDB=0.0726365;EFF=INTRON(MODIFIER||||453|LOC_Os06g40370|protein_coding|CODING|LOC_Os06g40370.1|10|1) FN3799-S.SNP.6:24042494 chr06:024042494 0 W/24042494-24042494 FN3799-S SNP T -> A AC=1;AN=190;BQB=0.851112;DP=2397;DP4=1166,1132,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44861e-09;MQSB=0.962543;RPB=0.907126;SGB=58.2031;VDB=0.867348;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T175|453|LOC_Os06g40370|protein_coding|CODING|LOC_Os06g40370.1|6|1) FN-311.SNP.6:24048060 chr06:024048060 0 W/24048060-24048060 FN-311 Single Base Substitution T-A INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN320-S.SNP.6:24049628 chr06:024049628 0 W/24049628-24049628 FN320-S Single Base Substitution T-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN1197-S.SNP.6:24057006 chr06:024057006 0 W/24057006-24057006 FN1197-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3556-S.SNP.6:24057132 chr06:024057132 0 W/24057132-24057132 FN3556-S SNP C -> T AC=2;AN=188;BQB=0.862612;DP=2565;DP4=1124,1348,28,22;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0116959;MQB=1.46009e-13;MQSB=0.0193777;RPB=0.780974;SGB=186.58;VDB=0.641223;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T205|258|LOC_Os06g40400|protein_coding|CODING|LOC_Os06g40400.1|2|1) FN3778-S.SNP.6:24066549 chr06:024066549 0 W/24066549-24066549 FN3778-S SNP G -> A AC=1;AN=190;BQB=0.998474;DP=2917;DP4=1255,1337,11,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.00166e-06;MQSB=0.967366;RPB=0.62124;SGB=18.552;VDB=0.926609;EFF=INTRON(MODIFIER||||986|LOC_Os06g40410|protein_coding|CODING|LOC_Os06g40410.1|2|1) FN2152-S.SNP.6:24069430 chr06:024069430 0 W/24069430-24069430 FN2152-S SNP A -> C AC=2;AN=168;BQB=0.640234;DP=2704;DP4=1390,1280,11,16;HOB=0.0235261;ICB=0.494119;MQ=15;MQ0F=0.542899;MQB=0.989747;MQSB=0;RPB=0.801792;SGB=19.9297;VDB=0.527894;EFF=UTR_3_PRIME(MODIFIER||239||163|LOC_Os06g40415|protein_coding|CODING|LOC_Os06g40415.1|6|1) FN2500.SNP.6:24074455 chr06:024074455 0 W/24074455-24074455 FN2500 SNP A -> G AC=1;AN=200;BQB=0.722552;DP=5141;DP4=2267,2549,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0502e-11;MQSB=0.924079;RPB=0.0555616;SGB=52.9314;VDB=0.336456;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.6:24077427 chr06:024077427 0 W/24077427-24077427 FN1099-S Single Base Substitution C-T INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3815-S.SNP.6:24077646 chr06:024077646 0 W/24077646-24077646 FN3815-S SNP C -> T AC=1;AN=190;BQB=0.969172;DP=2312;DP4=1023,1180,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63196e-07;MQSB=0.974753;RPB=0.658754;SGB=39.6545;VDB=0.940551;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.6:24085217 chr06:024085217 0 W/24085217-24085217 FN412-S Single Base Substitution A-T INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN4141-S.SNP.6:24085720 chr06:024085720 0 W/24085720-24085720 FN4141-S SNP C -> A AC=2;AN=170;BQB=0.963999;DP=2833;DP4=1285,1455,13,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.15398e-19;MQSB=0.957885;RPB=0.915049;SGB=96.8457;VDB=0.176878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.6:24096112 chr06:024096112 0 W/24096112-24096112 FN1461-S Single Base Substitution G-T START_GAINED HET LOC_Os06g40450 targeting protein for Xklp2, putative, expressed SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-153.SNP.6:24101391 chr06:024101391 0 W/24101391-24101391 FN-153 Single Base Substitution C-G INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN661-S.SNP.6:24105093 chr06:024105093 0 W/24105093-24105093 FN661-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN3475-S.SNP.6:24116518 chr06:024116518 0 W/24116518-24116518 FN3475-S SNP G -> A AC=1;AN=184;BQB=0.978428;DP=3742;DP4=2069,1587,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.00962052;MQB=0.280731;MQSB=3.60039e-13;RPB=0.305007;SGB=74.4875;VDB=0.336805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1335V|2027|LOC_Os06g40480|protein_coding|CODING|LOC_Os06g40480.1|2|1) FN3598-S.SNP.6:24119663 chr06:024119663 0 W/24119663-24119663 FN3598-S SNP G -> A AC=2;AN=188;BQB=0.999798;DP=4411;DP4=2270,2051,19,25;HOB=0.0210502;ICB=0.494738;MQ=23;MQ0F=0.0412605;MQB=0.951033;MQSB=1.83548e-05;RPB=0.601467;SGB=145.826;VDB=0.437479;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q311*|2027|LOC_Os06g40480|protein_coding|CODING|LOC_Os06g40480.1|1|1);LOF=(LOC_Os06g40480|LOC_Os06g40480|1|1.00);NMD=(LOC_Os06g40480|LOC_Os06g40480|1|1.00) FN2232-S.SNP.6:24126220 chr06:024126220 0 W/24126220-24126220 FN2232-S SNP A -> G AC=1;AN=190;BQB=0.246896;DP=4970;DP4=2020,2556,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201207;MQB=3.7612e-07;MQSB=0.911731;RPB=0.981394;SGB=36.1006;VDB=0.807393;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.6:24126824 chr06:024126824 0 W/24126824-24126824 FN1396-S Single Base Substitution A-G INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2794-S.SNP.6:24136675 chr06:024136675 0 W/24136675-24136675 FN2794-S SNP T -> A AC=2;AN=198;BQB=0.824501;DP=4332;DP4=2293,1801,31,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.34319e-30;MQSB=0.909724;RPB=0.538876;SGB=66.7737;VDB=0.471385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.6:24141671 chr06:024141671 0 W/24141671-24141671 FN2418 SNP G -> A AC=1;AN=200;BQB=0.839242;DP=4440;DP4=2127,2125,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48522e-11;MQSB=0.849429;RPB=0.993652;SGB=77.2904;VDB=0.576629;EFF=INTRON(MODIFIER||||307|LOC_Os06g40500|protein_coding|CODING|LOC_Os06g40500.1|1|1) FN_809-6-1.SNP.6:24142303 chr06:024142303 0 W/24142303-24142303 FN_809-6-1 Single Base Substitution A-G Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN-264.SNP.6:24160692 chr06:024160692 0 W/24160692-24160692 FN-264 Single Base Substitution G-A INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN1156-XA21.SNP.6:24162688 chr06:024162688 0 W/24162688-24162688 FN1156-XA21 Single Base Substitution A-T INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN921-S.SNP.6:24162690 chr06:024162690 0 W/24162690-24162690 FN921-S Single Base Substitution G-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-189.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN-189 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-327.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN-327 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN-34.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN-34 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN1403-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN1403-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1610-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN1610-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2124-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN2124-S SNP C -> T AC=2;AN=168;BQB=0.33636;DP=2591;DP4=1541,980,20,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.44823e-21;MQSB=0.999681;RPB=0.668138;SGB=82.9551;VDB=0.487732;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN2187-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN2187-S SNP C -> T AC=2;AN=190;BQB=0.984731;DP=4167;DP4=2030,1865,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.3613e-18;MQSB=0.455131;RPB=0.876546;SGB=140.173;VDB=0.301845;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN2360.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN2360 SNP C -> T AC=2;AN=192;BQB=0.994575;DP=4823;DP4=2323,2265,11,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.5825e-13;MQSB=0.939541;RPB=0.904153;SGB=82.5522;VDB=0.387982;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN337-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN337-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3517-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN3517-S SNP C -> T AC=2;AN=188;BQB=0.970292;DP=2838;DP4=1268,1509,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.88348e-13;MQSB=0.977475;RPB=0.998426;SGB=78.5038;VDB=0.224762;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN3717-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN3717-S SNP C -> T AC=2;AN=190;BQB=0.12488;DP=2751;DP4=1366,1300,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.8196e-05;MQSB=0.999036;RPB=0.764651;SGB=53.8699;VDB=0.488579;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN3937-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN3937-S SNP C -> T AC=2;AN=158;BQB=0.655522;DP=2454;DP4=1228,1155,5,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.42902e-09;MQSB=0.990978;RPB=0.554046;SGB=55.806;VDB=0.441075;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T565|688|LOC_Os06g40550|protein_coding|CODING|LOC_Os06g40550.1|6|1) FN819-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN819-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN994-S.SNP.6:24180715 chr06:024180715 0 W/24180715-24180715 FN994-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN959-S.SNP.6:24183411 chr06:024183411 0 W/24183411-24183411 FN959-S Single Base Substitution T-A INTRON HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2322.SNP.6:24186822 chr06:024186822 0 W/24186822-24186822 FN2322 SNP T -> C AC=1;AN=192;BQB=0.949143;DP=3995;DP4=2254,1424,13,2;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.56054e-07;MQSB=0.0383645;RPB=0.36833;SGB=43.3444;VDB=0.795712;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.6:24190990 chr06:024190990 0 W/24190990-24190990 FN1209-S Single Base Substitution G-A INTRON HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1434-S.SNP.6:24193175 chr06:024193175 0 W/24193175-24193175 FN1434-S Single Base Substitution T-C INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN906-S.SNP.6:24196326 chr06:024196326 0 W/24196326-24196326 FN906-S Single Base Substitution G-A INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN1257-S.SNP.6:24206958 chr06:024206958 0 W/24206958-24206958 FN1257-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3939-S.SNP.6:24208846 chr06:024208846 0 W/24208846-24208846 FN3939-S SNP A -> T AC=1;AN=158;BQB=0.883756;DP=2432;DP4=1171,1168,3,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.67682e-07;MQSB=0.984411;RPB=0.994872;SGB=37.4429;VDB=0.923033;EFF=INTRON(MODIFIER||||997|LOC_Os06g40600|protein_coding|CODING|LOC_Os06g40600.1|4|1) FN2556-S.SNP.6:24211262 chr06:024211262 0 W/24211262-24211262 FN2556-S SNP T -> A AC=1;AN=198;BQB=0.958811;DP=4642;DP4=2411,1990,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35771e-13;MQSB=0.999673;RPB=0.62375;SGB=100.095;VDB=0.864594;EFF=INTRON(MODIFIER||||997|LOC_Os06g40600|protein_coding|CODING|LOC_Os06g40600.1|1|1) FN2676-S.SNP.6:24212849 chr06:024212849 0 W/24212849-24212849 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.78542;DP=4321;DP4=2255,1792,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16473e-16;MQSB=0.945014;RPB=0.759709;SGB=123.342;VDB=0.816159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.6:24213373 chr06:024213373 0 W/24213373-24213373 FN1658-S SNP A -> G AC=1;AN=188;BQB=0.0268417;DP=3179;DP4=2096,1048,15,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000526149;MQSB=0.996523;RPB=0.847474;SGB=-126.603;VDB=0.0115197;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.6:24215994 chr06:024215994 0 W/24215994-24215994 FN551-S Single Base Substitution T-C INTRON HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2646-S.SNP.6:24225913 chr06:024225913 0 W/24225913-24225913 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.817939;DP=5318;DP4=2372,2644,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.21011e-14;MQSB=0.82056;RPB=0.662301;SGB=83.5316;VDB=0.576679;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S184|231|LOC_Os06g40630|protein_coding|CODING|LOC_Os06g40630.1|3|1) FN1202-S.SNP.6:24233784 chr06:024233784 0 W/24233784-24233784 FN1202-S Single Base Substitution G-A INTRON HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2160-S.SNP.6:24235892 chr06:024235892 0 W/24235892-24235892 FN2160-S SNP T -> A AC=2;AN=168;BQB=0.404134;DP=4077;DP4=2249,1716,24,29;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.9953e-13;MQSB=0.0761309;RPB=0.169778;SGB=-287.418;VDB=0.00546773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.6:24252468 chr06:024252468 0 W/24252468-24252468 FN2302 SNP C -> A AC=1;AN=192;BQB=0.431231;DP=4821;DP4=1916,2606,15,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49625e-18;MQSB=0.581892;RPB=0.970544;SGB=149.626;VDB=0.73732;EFF=INTERGENIC(MODIFIER||||||||||1) FN797-S.SNP.6:24256953 chr06:024256953 0 W/24256953-24256953 FN797-S Single Base Substitution C-T INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. W466-5-1.SNP.6:24262942 chr06:024262942 0 W/24262942-24262942 W466-5-1 Single Base Substitution C-A INTRON HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-150.SNP.6:24263582 chr06:024263582 0 W/24263582-24263582 FN-150 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g40700 OsSub50 - Putative Subtilisin homologue, expressed SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3661-S.SNP.6:24264855 chr06:024264855 0 W/24264855-24264855 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.945006;DP=3055;DP4=1370,1570,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000327332;MQB=1.42994e-09;MQSB=0.999471;RPB=0.905732;SGB=53.8699;VDB=0.8107;EFF=UTR_5_PRIME(MODIFIER||92||321|LOC_Os06g40704|protein_coding|CODING|LOC_Os06g40704.3|1|1),INTRON(MODIFIER||||321|LOC_Os06g40704|protein_coding|CODING|LOC_Os06g40704.2|1|1),INTRON(MODIFIER||||321|LOC_Os06g40704|protein_coding|CODING|LOC_Os06g40704.1|1|1) FN630-S.SNP.6:24269457 chr06:024269457 0 W/24269457-24269457 FN630-S Single Base Substitution T-C INTRON HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2788-S.SNP.6:24277222 chr06:024277222 0 W/24277222-24277222 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.537693;DP=4204;DP4=2093,1769,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000475737;MQB=1.52646e-11;MQSB=0.572296;RPB=0.489486;SGB=-38.6649;VDB=0.42452;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.6:24277738 chr06:024277738 0 W/24277738-24277738 FN3880-S SNP T -> C AC=1;AN=158;BQB=0.897065;DP=2517;DP4=1185,1199,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.9656e-09;MQSB=0.94952;RPB=0.9642;SGB=55.806;VDB=0.0541429;EFF=UTR_3_PRIME(MODIFIER||129||502|LOC_Os06g40730|protein_coding|CODING|LOC_Os06g40730.1|14|1) FN1576-S.SNP.6:24279612 chr06:024279612 0 W/24279612-24279612 FN1576-S Single Base Substitution G-A INTRON HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN886-S.SNP.6:24280416 chr06:024280416 0 W/24280416-24280416 FN886-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1561-S.SNP.6:24284966 chr06:024284966 0 W/24284966-24284966 FN1561-S Single Base Substitution C-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3767-S.SNP.6:24295845 chr06:024295845 0 W/24295845-24295845 FN3767-S SNP A -> C AC=1;AN=190;BQB=0.907041;DP=2485;DP4=1120,1199,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.25222e-10;MQSB=0.810877;RPB=0.876616;SGB=71.8647;VDB=0.534774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3959-S.SNP.6:24297880 chr06:024297880 0 W/24297880-24297880 FN3959-S SNP T -> A AC=2;AN=168;BQB=0.991771;DP=3116;DP4=1141,1766,9,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.39385e-13;MQSB=0.984048;RPB=0.468416;SGB=96.481;VDB=0.686705;EFF=INTRON(MODIFIER||||191|LOC_Os06g40770|protein_coding|CODING|LOC_Os06g40770.1|3|1) FN1065-S.SNP.6:24298495 chr06:024298495 0 W/24298495-24298495 FN1065-S Single Base Substitution A-G INTRON HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN-283.SNP.6:24313365 chr06:024313365 0 W/24313365-24313365 FN-283 Single Base Substitution T-C INTRON HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1229-S.SNP.6:24316002 chr06:024316002 0 W/24316002-24316002 FN1229-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g40780 MONOCULM 1, putative, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1643-S.SNP.6:24321462 chr06:024321462 0 W/24321462-24321462 FN1643-S Single Base Substitution T-C INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN3499-S.SNP.6:24324859 chr06:024324859 0 W/24324859-24324859 FN3499-S SNP T -> C AC=1;AN=188;BQB=0.16413;DP=2881;DP4=1491,1263,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.00752947;MQSB=0.805098;RPB=0.630971;SGB=-3.72151;VDB=0.627244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.6:24326378 chr06:024326378 0 W/24326378-24326378 FN2788-S SNP T -> C AC=2;AN=198;BQB=0.818533;DP=4732;DP4=2302,2210,18,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000211327;MQB=2.20067e-26;MQSB=0.860706;RPB=0.285133;SGB=201.188;VDB=0.773684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.6:24330371 chr06:024330371 0 W/24330371-24330371 FN1405-S Single Base Substitution C-T INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2188-S.SNP.6:24350047 chr06:024350047 0 W/24350047-24350047 FN2188-S SNP A -> T AC=1;AN=190;BQB=0.716916;DP=4940;DP4=2233,2501,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.5236e-18;MQSB=0.671778;RPB=0.992349;SGB=92.9626;VDB=0.558826;EFF=INTRON(MODIFIER||||519|LOC_Os06g40818|protein_coding|CODING|LOC_Os06g40818.1|1|1) FN1243-S.SNP.6:24352439 chr06:024352439 0 W/24352439-24352439 FN1243-S Single Base Substitution T-C INTRON HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3979-S.SNP.6:24354182 chr06:024354182 0 W/24354182-24354182 FN3979-S SNP C -> T AC=1;AN=168;BQB=0.999988;DP=2579;DP4=1202,1253,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42703e-10;MQSB=0.814417;RPB=0.997496;SGB=87.6193;VDB=0.033881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.6:24354419 chr06:024354419 0 W/24354419-24354419 FN1566-S Single Base Substitution T-A INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3756-S.SNP.6:24355280 chr06:024355280 0 W/24355280-24355280 FN3756-S SNP G -> C AC=1;AN=190;BQB=0.983276;DP=3129;DP4=1548,1443,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37686e-07;MQSB=0.957355;RPB=0.741344;SGB=28.9929;VDB=0.0720987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.6:24356733 chr06:024356733 0 W/24356733-24356733 FN1068-S Single Base Substitution G-T INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2437.SNP.6:24358041 chr06:024358041 0 W/24358041-24358041 FN2437 SNP G -> A AC=2;AN=200;BQB=0.531333;DP=1992;DP4=1423,274,17,3;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.0165663;MQB=0.737812;MQSB=2.60442e-13;RPB=0.861106;SGB=37.3004;VDB=0.504965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.6:24372117 chr06:024372117 0 W/24372117-24372117 FN2150-S SNP A -> G AC=2;AN=168;BQB=0.0670596;DP=2571;DP4=1134,1382,15,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.39252e-14;MQSB=0.761357;RPB=0.243692;SGB=-7.61782;VDB=0.550718;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D244|615|LOC_Os06g40860|protein_coding|CODING|LOC_Os06g40860.1|1|1) FN-197.SNP.6:24373603 chr06:024373603 0 W/24373603-24373603 FN-197 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g40870 expressed protein SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-115.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN-115 Single Base Substitution G-A INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-200.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN-200 Single Base Substitution G-A INTERGENIC HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-309.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN-309 Single Base Substitution G-A INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-342.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN-342 Single Base Substitution G-A INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-60.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN-60 Single Base Substitution G-A INTERGENIC HOMO SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1121-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2469.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN2469 SNP G -> A AC=2;AN=200;BQB=0.2782;DP=5238;DP4=2372,2524,24,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000190913;MQB=6.33081e-36;MQSB=0.746787;RPB=0.996133;SGB=266.102;VDB=0.78311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN3288-S SNP G -> A AC=1;AN=184;BQB=0.725673;DP=3139;DP4=1412,1596,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000637146;MQB=0.000172243;MQSB=0.830068;RPB=0.967333;SGB=25.1826;VDB=0.876045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.230962;DP=3026;DP4=1310,1593,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.99079e-08;MQSB=0.959811;RPB=0.997824;SGB=67.4439;VDB=0.880738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN3749-S SNP G -> A AC=1;AN=190;BQB=0.324068;DP=3150;DP4=1408,1583,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.49364e-11;MQSB=0.865601;RPB=0.99944;SGB=51.7524;VDB=0.652557;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN3827-S SNP G -> A AC=2;AN=190;BQB=0.171268;DP=2888;DP4=1312,1432,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.20752e-09;MQSB=0.999846;RPB=0.481142;SGB=108.296;VDB=0.344192;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN3883-S SNP G -> A AC=2;AN=158;BQB=0.986175;DP=2675;DP4=1211,1342,14,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.04544e-13;MQSB=0.997969;RPB=0.686318;SGB=103.87;VDB=0.0937973;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN4134-S SNP G -> A AC=2;AN=182;BQB=0.772325;DP=2949;DP4=1397,1446,14,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.0695e-15;MQSB=0.992275;RPB=0.373878;SGB=138.839;VDB=0.704008;EFF=INTERGENIC(MODIFIER||||||||||1) FN4154-S.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 FN4154-S SNP G -> A AC=2;AN=170;BQB=0.898654;DP=2552;DP4=1145,1296,9,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.57613e-13;MQSB=0.959765;RPB=0.742674;SGB=123.397;VDB=0.238596;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.6:24377401 chr06:024377401 0 W/24377401-24377401 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN547-S.SNP.6:24386335 chr06:024386335 0 W/24386335-24386335 FN547-S Single Base Substitution G-C INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3376-S.SNP.6:24387851 chr06:024387851 0 W/24387851-24387851 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.999832;DP=3088;DP4=1477,1544,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.39005e-12;MQSB=0.974923;RPB=0.999695;SGB=89.4385;VDB=0.680279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T95I|144|LOC_Os06g40900|protein_coding|CODING|LOC_Os06g40900.1|3|1) FN758-S.SNP.6:24395329 chr06:024395329 0 W/24395329-24395329 FN758-S Single Base Substitution G-T INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. W423-5-1.SNP.6:24396629 chr06:024396629 0 W/24396629-24396629 W423-5-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g40930 hypothetical protein SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN1348-S.SNP.6:24402928 chr06:024402928 0 W/24402928-24402928 FN1348-S Single Base Substitution G-A INTRON HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN961-S.SNP.6:24407498 chr06:024407498 0 W/24407498-24407498 FN961-S Single Base Substitution G-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1261-S.SNP.6:24414300 chr06:024414300 0 W/24414300-24414300 FN1261-S Single Base Substitution T-G INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN_829-2-5.SNP.6:24417101 chr06:024417101 0 W/24417101-24417101 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN_831-4-1.SNP.6:24440850 chr06:024440850 0 W/24440850-24440850 FN_831-4-1 Single Base Substitution T-A HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2330.SNP.6:24441923 chr06:024441923 0 W/24441923-24441923 FN2330 SNP T -> A AC=2;AN=192;BQB=0.301347;DP=4730;DP4=2002,2027,26,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.21698e-28;MQSB=0.455483;RPB=0.828785;SGB=113.537;VDB=0.63811;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.6:24469633 chr06:024469633 0 W/24469633-24469633 FN984-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g40980 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2397.SNP.6:24470481 chr06:024470481 0 W/24470481-24470481 FN2397 SNP A -> C AC=2;AN=200;BQB=0.162881;DP=4612;DP4=2180,2110,28,20;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0140937;MQB=0.0527229;MQSB=4.54594e-08;RPB=0.833222;SGB=162.845;VDB=0.409058;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L546|1157|LOC_Os06g40980|protein_coding|CODING|LOC_Os06g40980.1|1|1) FN4040-S.SNP.6:24473194 chr06:024473194 0 W/24473194-24473194 FN4040-S SNP G -> T AC=1;AN=168;BQB=0.572223;DP=3501;DP4=1702,1642,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00514139;MQB=3.69908e-06;MQSB=0.0962999;RPB=0.990751;SGB=19.7539;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.6:24473196 chr06:024473196 0 W/24473196-24473196 FN4040-S SNP A -> C AC=1;AN=168;BQB=0.99375;DP=3521;DP4=1674,1634,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00511218;MQB=2.91821e-07;MQSB=0.108023;RPB=0.392681;SGB=19.7539;VDB=0.0784785;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.6:24473705 chr06:024473705 0 W/24473705-24473705 FN3292-S SNP T -> C AC=2;AN=184;BQB=0.527931;DP=3745;DP4=1220,2240,14,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.05818e-18;MQSB=0.820791;RPB=0.344123;SGB=-46.751;VDB=0.832503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.6:24478100 chr06:024478100 0 W/24478100-24478100 FN3354-S SNP A -> G AC=1;AN=184;BQB=0.848292;DP=2953;DP4=1244,1592,4,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58472e-10;MQSB=0.941883;RPB=0.526408;SGB=84.9167;VDB=0.338372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.6:24479789 chr06:024479789 0 W/24479789-24479789 FN3632-S SNP G -> A AC=2;AN=190;BQB=0.927935;DP=2872;DP4=1407,1344,22,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.14718e-20;MQSB=0.981717;RPB=0.685819;SGB=176.604;VDB=0.910885;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.6:24496115 chr06:024496115 0 W/24496115-24496115 FN620-S Single Base Substitution T-A INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN810-S.SNP.6:24506904 chr06:024506904 0 W/24506904-24506904 FN810-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g41030 DUF1680 domain containing protein, putative, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3910-S.SNP.6:24507371 chr06:024507371 0 W/24507371-24507371 FN3910-S SNP G -> C AC=2;AN=158;BQB=0.311847;DP=2400;DP4=1024,1248,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.87617e-10;MQSB=0.999803;RPB=0.0502084;SGB=42.7743;VDB=0.0110356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N59K|902|LOC_Os06g41030|protein_coding|CODING|LOC_Os06g41030.1|1|1) FN499-S.SNP.6:24522433 chr06:024522433 0 W/24522433-24522433 FN499-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN782-S.SNP.6:24526512 chr06:024526512 0 W/24526512-24526512 FN782-S Single Base Substitution G-C INTRON HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN587-S.SNP.6:24528630 chr06:024528630 0 W/24528630-24528630 FN587-S Single Base Substitution G-C INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2234-S.SNP.6:24530134 chr06:024530134 0 W/24530134-24530134 FN2234-S SNP A -> G AC=2;AN=190;BQB=0.152792;DP=4739;DP4=2103,2258,18,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.93185e-13;MQSB=0.80724;RPB=0.951569;SGB=94.6341;VDB=0.655526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.6:24530146 chr06:024530146 0 W/24530146-24530146 FN2234-S SNP A -> G AC=2;AN=190;BQB=0.32091;DP=4682;DP4=2125,2168,14,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.63301e-13;MQSB=0.912144;RPB=0.794544;SGB=36.4291;VDB=0.243412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.6:24537203 chr06:024537203 0 W/24537203-24537203 FN2149-S SNP A -> G AC=1;AN=158;BQB=0.104566;DP=449;DP4=195,231,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.0491052;MQSB=0.00139007;RPB=0.940467;SGB=10.4803;VDB=0.113645;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.6:24541450 chr06:024541450 0 W/24541450-24541450 FN-184 Single Base Substitution C-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3965-S.SNP.6:24549609 chr06:024549609 0 W/24549609-24549609 FN3965-S SNP C -> A AC=1;AN=168;BQB=0.935735;DP=3032;DP4=1531,1382,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=17;MQ0F=0.133245;MQB=0.512486;MQSB=2.18308e-15;RPB=0.964689;SGB=123.066;VDB=0.420466;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.6:24555126 chr06:024555126 0 W/24555126-24555126 FN4300-S SNP G -> A AC=2;AN=170;BQB=0.978366;DP=2625;DP4=1184,1361,11,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.172e-13;MQSB=0.952337;RPB=0.464335;SGB=83.4133;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.6:24573238 chr06:024573238 0 W/24573238-24573238 FN3994-S SNP C -> T AC=2;AN=168;BQB=0.933958;DP=2408;DP4=1107,1198,19,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.66688e-17;MQSB=0.874905;RPB=0.593256;SGB=110.226;VDB=0.15421;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.6:24573417 chr06:024573417 0 W/24573417-24573417 FN4255-S SNP G -> A AC=1;AN=170;BQB=0.997099;DP=2374;DP4=1248,1044,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.47498e-08;MQSB=0.998881;RPB=0.997804;SGB=22.3266;VDB=0.794355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.6:24574755 chr06:024574755 0 W/24574755-24574755 FN1552-S SNP C -> T AC=1;AN=188;BQB=0.96195;DP=1695;DP4=824,823,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.98679e-06;MQSB=0.580037;RPB=0.284951;SGB=35.3493;VDB=0.439579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A151V|623|LOC_Os06g41110|protein_coding|CODING|LOC_Os06g41110.1|1|1) FN708-S.SNP.6:24582769 chr06:024582769 0 W/24582769-24582769 FN708-S Single Base Substitution A-T INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2676-S.SNP.6:24592642 chr06:024592642 0 W/24592642-24592642 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.929914;DP=4704;DP4=2491,1969,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.47087e-06;MQSB=0.695076;RPB=0.54439;SGB=40.4492;VDB=0.61407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.6:24593113 chr06:024593113 0 W/24593113-24593113 FN2663-S SNP C -> G AC=1;AN=200;BQB=0.697671;DP=4724;DP4=2365,2029,15,12;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0368332;MQB=0.756848;MQSB=0.979504;RPB=0.999942;SGB=23.9365;VDB=0.0855497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.6:24594888 chr06:024594888 0 W/24594888-24594888 FN3712-S SNP G -> T AC=1;AN=190;BQB=0.939653;DP=2912;DP4=1536,1292,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33918e-05;MQSB=0.913554;RPB=0.132024;SGB=30.8803;VDB=0.648709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.6:24595452 chr06:024595452 0 W/24595452-24595452 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.428078;DP=5213;DP4=2309,2590,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.38436e-16;MQSB=0.220133;RPB=0.656756;SGB=-7.05853;VDB=0.756395;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.6:24597852 chr06:024597852 0 W/24597852-24597852 FN1033-S Single Base Substitution C-T INTERGENIC HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3479-S.SNP.6:24602452 chr06:024602452 0 W/24602452-24602452 FN3479-S SNP A -> G AC=1;AN=184;BQB=0.992631;DP=2698;DP4=1180,1382,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.32426e-09;MQSB=0.831378;RPB=0.988598;SGB=66.8296;VDB=0.868888;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.6:24606904 chr06:024606904 0 W/24606904-24606904 FN-407 Single Base Substitution T-A INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1065-S.SNP.6:24606904 chr06:024606904 0 W/24606904-24606904 FN1065-S Single Base Substitution T-A INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1151-S.SNP.6:24606904 chr06:024606904 0 W/24606904-24606904 FN1151-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2428.SNP.6:24606904 chr06:024606904 0 W/24606904-24606904 FN2428 SNP T -> A AC=1;AN=200;BQB=0.627042;DP=4176;DP4=2049,1578,18,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25821e-09;MQSB=0.987039;RPB=0.640498;SGB=45.1159;VDB=0.00198439;EFF=INTERGENIC(MODIFIER||||||||||1) FN407-S.SNP.6:24606904 chr06:024606904 0 W/24606904-24606904 FN407-S Single Base Substitution T-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2499.SNP.6:24611537 chr06:024611537 0 W/24611537-24611537 FN2499 SNP G -> A AC=2;AN=200;BQB=0.982874;DP=4782;DP4=2261,2271,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.35393e-18;MQSB=0.970497;RPB=0.565279;SGB=78.9831;VDB=0.419718;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.6:24615311 chr06:024615311 0 W/24615311-24615311 FN978-S Single Base Substitution T-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1197-S.SNP.6:24622352 chr06:024622352 0 W/24622352-24622352 FN1197-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1023-S.SNP.6:24628735 chr06:024628735 0 W/24628735-24628735 FN1023-S Single Base Substitution A-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2704-S.SNP.6:24628735 chr06:024628735 0 W/24628735-24628735 FN2704-S SNP A -> T AC=1;AN=200;BQB=0.421195;DP=4538;DP4=2190,2123,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02119e-12;MQSB=0.18648;RPB=0.999153;SGB=-10.0844;VDB=0.3694;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.6:24628773 chr06:024628773 0 W/24628773-24628773 FN-157 Single Base Substitution T-A INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2417.SNP.6:24635838 chr06:024635838 0 W/24635838-24635838 FN2417 SNP T -> G AC=1;AN=200;BQB=0.958483;DP=3557;DP4=1506,1572,10,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000281136;MQB=4.5954e-08;MQSB=0.000195659;RPB=0.929497;SGB=29.4849;VDB=0.375242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K91Q|131|LOC_Os06g41170|protein_coding|CODING|LOC_Os06g41170.1|1|1) FN1693-S.SNP.6:24636507 chr06:024636507 0 W/24636507-24636507 FN1693-S SNP A -> T AC=2;AN=188;BQB=0.182744;DP=2741;DP4=1789,915,17,7;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00255381;MQB=0.000433919;MQSB=6.55809e-05;RPB=0.963509;SGB=74.9605;VDB=0.338527;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.6:24639879 chr06:024639879 0 W/24639879-24639879 FN631-S Single Base Substitution T-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN631-S.SNP.6:24639880 chr06:024639880 0 W/24639880-24639880 FN631-S Single Base Substitution G-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3892-S.SNP.6:24653687 chr06:024653687 0 W/24653687-24653687 FN3892-S SNP C -> T AC=1;AN=158;BQB=0.99965;DP=2440;DP4=1094,1242,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.20552e-07;MQSB=0.189103;RPB=0.771779;SGB=55.806;VDB=0.706175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P89S|790|LOC_Os06g41200|protein_coding|CODING|LOC_Os06g41200.1|1|1) FN3455-S.SNP.6:24653813 chr06:024653813 0 W/24653813-24653813 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.999881;DP=3222;DP4=1637,1486,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19389e-07;MQSB=0.665758;RPB=0.619879;SGB=62.3078;VDB=0.719175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D131N|790|LOC_Os06g41200|protein_coding|CODING|LOC_Os06g41200.1|1|1) FN3398-S.SNP.6:24654489 chr06:024654489 0 W/24654489-24654489 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.967114;DP=3181;DP4=1606,1520,2,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.18437e-10;MQSB=0.96784;RPB=0.744707;SGB=66.8296;VDB=0.86937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S356F|790|LOC_Os06g41200|protein_coding|CODING|LOC_Os06g41200.1|1|1) FN_N1-119-1.SNP.6:24657482 chr06:024657482 0 W/24657482-24657482 FN_N1-119-1 Single Base Substitution T-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2453.SNP.6:24658067 chr06:024658067 0 W/24658067-24658067 FN2453 SNP T -> A AC=1;AN=200;BQB=0.900519;DP=4652;DP4=2297,2144,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.93366e-08;MQSB=0.955201;RPB=0.557404;SGB=33.0593;VDB=0.790974;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.6:24670146 chr06:024670146 0 W/24670146-24670146 FN-70 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g41210 hypothetical protein SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2149-S.SNP.6:24676054 chr06:024676054 0 W/24676054-24676054 FN2149-S SNP A -> T AC=1;AN=168;BQB=0.968204;DP=3997;DP4=2026,1944,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.37636e-08;MQSB=0.991009;RPB=0.812212;SGB=29.4772;VDB=0.568203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.6:24681512 chr06:024681512 0 W/24681512-24681512 FN2785-S SNP G -> T AC=1;AN=198;BQB=0.0277325;DP=3898;DP4=1943,1696,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.55738e-07;MQSB=0.980933;RPB=0.999553;SGB=26.7492;VDB=0.780046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.6:24686047 chr06:024686047 0 W/24686047-24686047 FN3918-S SNP A -> T AC=1;AN=158;BQB=0.747548;DP=2448;DP4=1200,1161,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000816993;MQB=1.14029e-06;MQSB=0.807183;RPB=0.788983;SGB=30.704;VDB=0.18368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N100Y|999|LOC_Os06g41250|protein_coding|CODING|LOC_Os06g41250.1|2|1) FN739-S.SNP.6:24690139 chr06:024690139 0 W/24690139-24690139 FN739-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2650-S.SNP.6:24698590 chr06:024698590 0 W/24698590-24698590 FN2650-S SNP A -> T AC=2;AN=200;BQB=0.839142;DP=4835;DP4=2372,2254,13,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.54508e-14;MQSB=0.926778;RPB=0.313788;SGB=83.5316;VDB=0.124622;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.6:24712163 chr06:024712163 0 W/24712163-24712163 FN-400 Single Base Substitution C-T INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2091-S.SNP.6:24713079 chr06:024713079 0 W/24713079-24713079 FN2091-S SNP C -> T AC=1;AN=168;BQB=0.0138875;DP=2638;DP4=1849,740,20,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.8027e-08;MQSB=0.729489;RPB=0.250062;SGB=-164.05;VDB=0.266315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.6:24721282 chr06:024721282 0 W/24721282-24721282 FN2666-S SNP T -> A AC=2;AN=200;BQB=0.575413;DP=4965;DP4=2273,2353,30,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00020141;MQB=5.75294e-38;MQSB=0.868173;RPB=0.90595;SGB=14.7276;VDB=0.106019;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.6:24735013 chr06:024735013 0 W/24735013-24735013 FN-185 Single Base Substitution T-A INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN3851-S.SNP.6:24741348 chr06:024741348 0 W/24741348-24741348 FN3851-S SNP A -> C AC=2;AN=158;BQB=0.870618;DP=2324;DP4=1061,1113,24,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.74601e-21;MQSB=0.99466;RPB=0.999968;SGB=114.94;VDB=0.455772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q119P|142|LOC_Os06g41330|protein_coding|CODING|LOC_Os06g41330.1|2|1) FN3920-S.SNP.6:24741363 chr06:024741363 0 W/24741363-24741363 FN3920-S SNP G -> C AC=1;AN=158;BQB=0.873972;DP=2379;DP4=1112,1152,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.35634e-06;MQSB=0.970646;RPB=1;SGB=30.704;VDB=0.929681;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G124A|142|LOC_Os06g41330|protein_coding|CODING|LOC_Os06g41330.1|2|1) FN1577-S.SNP.6:24743920 chr06:024743920 0 W/24743920-24743920 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1409-S.SNP.6:24744246 chr06:024744246 0 W/24744246-24744246 FN1409-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN795-S.SNP.6:24744316 chr06:024744316 0 W/24744316-24744316 FN795-S Single Base Substitution T-A INTERGENIC HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2320.SNP.6:24746616 chr06:024746616 0 W/24746616-24746616 FN2320 SNP T -> A AC=1;AN=192;BQB=0.0460811;DP=5010;DP4=2154,2518,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.50682e-08;MQSB=0.990868;RPB=0.152331;SGB=-88.6243;VDB=0.249284;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.6:24747460 chr06:024747460 0 W/24747460-24747460 FN982-S Single Base Substitution C-A INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2160-S.SNP.6:24747880 chr06:024747880 0 W/24747880-24747880 FN2160-S SNP C -> A AC=2;AN=168;BQB=0.0232677;DP=3925;DP4=2033,1786,25,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.58703e-25;MQSB=0.945556;RPB=0.977448;SGB=-56.5804;VDB=0.977773;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.6:24748850 chr06:024748850 0 W/24748850-24748850 FN891-S Single Base Substitution A-T INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3923-S.SNP.6:24760196 chr06:024760196 0 W/24760196-24760196 FN3923-S SNP G -> C AC=2;AN=158;BQB=0.997214;DP=2883;DP4=1183,1608,17,14;HOB=0.024996;ICB=0.493752;MQ=24;MQ0F=0.279223;MQB=0.99879;MQSB=0;RPB=0.445142;SGB=59.3604;VDB=0.738005;EFF=INTRON(MODIFIER||||2055|LOC_Os06g41340|protein_coding|CODING|LOC_Os06g41340.1|3|1) FN3923-S.SNP.6:24760199 chr06:024760199 0 W/24760199-24760199 FN3923-S SNP C -> A AC=2;AN=158;BQB=0.957999;DP=2881;DP4=1180,1585,17,12;HOB=0.024996;ICB=0.493752;MQ=24;MQ0F=0.288094;MQB=0.961811;MQSB=0;RPB=0.274152;SGB=121.348;VDB=0.733493;EFF=INTRON(MODIFIER||||2055|LOC_Os06g41340|protein_coding|CODING|LOC_Os06g41340.1|3|1) FN-30.SNP.6:24772807 chr06:024772807 0 W/24772807-24772807 FN-30 Single Base Substitution G-A INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN851-S.SNP.6:24778590 chr06:024778590 0 W/24778590-24778590 FN851-S Single Base Substitution G-T INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3484-S.SNP.6:24783400 chr06:024783400 0 W/24783400-24783400 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.973867;DP=2239;DP4=1115,1051,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32629e-07;MQSB=0.965081;RPB=0.508863;SGB=53.2642;VDB=0.269079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.6:24786780 chr06:024786780 0 W/24786780-24786780 FN1545-S Single Base Substitution T-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN_776-5-1.SNP.6:24787208 chr06:024787208 0 W/24787208-24787208 FN_776-5-1 Single Base Substitution A-G HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3708-S.SNP.6:24791993 chr06:024791993 0 W/24791993-24791993 FN3708-S SNP G -> A AC=2;AN=190;BQB=0.423305;DP=2790;DP4=1323,1331,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.92131e-12;MQSB=0.993458;RPB=0.783218;SGB=19.6499;VDB=0.236319;EFF=INTRON(MODIFIER||||399|LOC_Os06g41360|protein_coding|CODING|LOC_Os06g41360.1|3|1),INTRON(MODIFIER||||399|LOC_Os06g41360|protein_coding|CODING|LOC_Os06g41360.2|3|1),INTRON(MODIFIER||||387|LOC_Os06g41360|protein_coding|CODING|LOC_Os06g41360.3|3|1),INTRON(MODIFIER||||387|LOC_Os06g41360|protein_coding|CODING|LOC_Os06g41360.4|3|1),INTRON(MODIFIER||||234|LOC_Os06g41360|protein_coding|CODING|LOC_Os06g41360.5|1|1) FN3434-S.SNP.6:24794704 chr06:024794704 0 W/24794704-24794704 FN3434-S SNP T -> C AC=1;AN=184;BQB=0.786694;DP=2734;DP4=1314,1343,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19408e-05;MQSB=0.675508;RPB=0.908327;SGB=48.7425;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.6:24795746 chr06:024795746 0 W/24795746-24795746 FN1257-S Single Base Substitution G-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1257-S.SNP.6:24795747 chr06:024795747 0 W/24795747-24795747 FN1257-S Single Base Substitution C-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2124-S.SNP.6:24796043 chr06:024796043 0 W/24796043-24796043 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.0568311;DP=4078;DP4=1937,2113,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.50083e-06;MQSB=0.954419;RPB=0.363318;SGB=-63.3606;VDB=0.355601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.6:24796122 chr06:024796122 0 W/24796122-24796122 FN1284-S Single Base Substitution G-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN4249-S.SNP.6:24798030 chr06:024798030 0 W/24798030-24798030 FN4249-S SNP G -> A AC=2;AN=170;BQB=0.936091;DP=2409;DP4=1165,1184,4,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.00124533;MQB=1.36367e-10;MQSB=0.687514;RPB=0.999547;SGB=70.0854;VDB=0.938932;EFF=INTRON(MODIFIER||||314|LOC_Os06g41370|protein_coding|CODING|LOC_Os06g41370.1|2|1) FN750-S.SNP.6:24798351 chr06:024798351 0 W/24798351-24798351 FN750-S Single Base Substitution T-C INTRON HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN632-S.SNP.6:24800748 chr06:024800748 0 W/24800748-24800748 FN632-S Single Base Substitution G-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN-216.SNP.6:24801129 chr06:024801129 0 W/24801129-24801129 FN-216 Single Base Substitution C-T INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-212.SNP.6:24802591 chr06:024802591 0 W/24802591-24802591 FN-212 Single Base Substitution T-G INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-212.SNP.6:24802592 chr06:024802592 0 W/24802592-24802592 FN-212 Single Base Substitution G-T INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-123.SNP.6:24803274 chr06:024803274 0 W/24803274-24803274 FN-123 Single Base Substitution A-G INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN580-S.SNP.6:24809055 chr06:024809055 0 W/24809055-24809055 FN580-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN979-S.SNP.6:24810925 chr06:024810925 0 W/24810925-24810925 FN979-S Single Base Substitution A-G INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3525-S.SNP.6:24821631 chr06:024821631 0 W/24821631-24821631 FN3525-S SNP T -> C AC=1;AN=188;BQB=0.960851;DP=2851;DP4=1469,1300,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38412e-05;MQSB=0.993639;RPB=0.0731932;SGB=30.8063;VDB=0.0313397;EFF=INTRON(MODIFIER||||83|LOC_Os06g41410|protein_coding|CODING|LOC_Os06g41410.1|1|1) FN1426-S.SNP.6:24821774 chr06:024821774 0 W/24821774-24821774 FN1426-S Single Base Substitution C-A INTRON HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2739-S.SNP.6:24827457 chr06:024827457 0 W/24827457-24827457 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.272743;DP=4399;DP4=2301,1859,13,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0111389;MQB=0.980643;MQSB=0.525712;RPB=0.938494;SGB=100.316;VDB=0.772863;EFF=INTRON(MODIFIER||||83|LOC_Os06g41410|protein_coding|CODING|LOC_Os06g41410.1|3|1) FN-330.SNP.6:24828058 chr06:024828058 0 W/24828058-24828058 FN-330 Single Base Substitution G-T INTRON HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN3651-S.SNP.6:24828575 chr06:024828575 0 W/24828575-24828575 FN3651-S SNP T -> A AC=1;AN=190;BQB=0.999998;DP=2797;DP4=1458,1138,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0110833;MQB=0.0030465;MQSB=0.607471;RPB=0.65073;SGB=32.5467;VDB=0.858265;EFF=INTRON(MODIFIER||||83|LOC_Os06g41410|protein_coding|CODING|LOC_Os06g41410.1|3|1) FN3666-S.SNP.6:24831430 chr06:024831430 0 W/24831430-24831430 FN3666-S SNP A -> T AC=1;AN=190;BQB=0.994764;DP=2482;DP4=969,1419,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13383e-09;MQSB=0.367514;RPB=0.729622;SGB=43.2083;VDB=0.981793;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.6:24837954 chr06:024837954 0 W/24837954-24837954 FN1129-S Single Base Substitution T-G INTRON HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1069-S.SNP.6:24849246 chr06:024849246 0 W/24849246-24849246 FN1069-S Single Base Substitution C-T INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN-361.SNP.6:24855245 chr06:024855245 0 W/24855245-24855245 FN-361 Single Base Substitution A-G INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3722-S.SNP.6:24862064 chr06:024862064 0 W/24862064-24862064 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.543379;DP=2696;DP4=1335,1258,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00778932;MQB=4.74554e-10;MQSB=0.477388;RPB=0.712879;SGB=21.2038;VDB=0.821849;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.6:24863246 chr06:024863246 0 W/24863246-24863246 FN-127 Single Base Substitution G-A INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2421.SNP.6:24868963 chr06:024868963 0 W/24868963-24868963 FN2421 SNP T -> C AC=1;AN=200;BQB=0.99935;DP=4441;DP4=2129,1985,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.90246e-12;MQSB=0.919307;RPB=0.247702;SGB=45.1159;VDB=0.0374632;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A666|1171|LOC_Os06g41480|protein_coding|CODING|LOC_Os06g41480.1|1|1) FN391-S.SNP.6:24869242 chr06:024869242 0 W/24869242-24869242 FN391-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2426.SNP.6:24875707 chr06:024875707 0 W/24875707-24875707 FN2426 SNP G -> A AC=1;AN=200;BQB=0.137968;DP=4610;DP4=2308,2084,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.22848e-14;MQSB=0.996158;RPB=0.671468;SGB=58.1418;VDB=0.988878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.6:24891009 chr06:024891009 0 W/24891009-24891009 FN3851-S SNP T -> A AC=2;AN=158;BQB=0.81003;DP=2325;DP4=1077,1112,15,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.4295e-16;MQSB=0.901534;RPB=0.519639;SGB=81.2457;VDB=0.786527;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G798|831|LOC_Os06g41510|protein_coding|CODING|LOC_Os06g41510.1|1|1) FN3851-S.SNP.6:24891018 chr06:024891018 0 W/24891018-24891018 FN3851-S SNP G -> A AC=2;AN=158;BQB=0.99962;DP=2306;DP4=1110,1110,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.18407e-15;MQSB=0.998993;RPB=0.814;SGB=99.5005;VDB=0.736818;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E801|831|LOC_Os06g41510|protein_coding|CODING|LOC_Os06g41510.1|1|1) FN3851-S.SNP.6:24891019 chr06:024891019 0 W/24891019-24891019 FN3851-S SNP G -> T AC=2;AN=158;BQB=0.850338;DP=2302;DP4=1105,1103,13,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.54802e-14;MQSB=0.956325;RPB=0.922508;SGB=86.3921;VDB=0.61524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V802F|831|LOC_Os06g41510|protein_coding|CODING|LOC_Os06g41510.1|1|1) FN3474-S.SNP.6:24891485 chr06:024891485 0 W/24891485-24891485 FN3474-S SNP G -> T AC=1;AN=184;BQB=0.958621;DP=2594;DP4=1235,1286,4,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.83299e-10;MQSB=0.944071;RPB=0.932125;SGB=53.3568;VDB=0.140266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.6:24892699 chr06:024892699 0 W/24892699-24892699 FN3472-S SNP C -> T AC=1;AN=184;BQB=0.485611;DP=3277;DP4=1514,1680,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000449975;MQSB=0.917415;RPB=0.137962;SGB=44.2207;VDB=0.475586;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.6:24894585 chr06:024894585 0 W/24894585-24894585 FN526-S Single Base Substitution T-G INTRON HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN742-S.SNP.6:24898795 chr06:024898795 0 W/24898795-24898795 FN742-S Single Base Substitution A-G INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1064-S.SNP.6:24901335 chr06:024901335 0 W/24901335-24901335 FN1064-S Single Base Substitution T-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN-303.SNP.6:24903354 chr06:024903354 0 W/24903354-24903354 FN-303 Single Base Substitution G-A INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN756-S.SNP.6:24904702 chr06:024904702 0 W/24904702-24904702 FN756-S Single Base Substitution G-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN3353-S.SNP.6:24905810 chr06:024905810 0 W/24905810-24905810 FN3353-S SNP A -> T AC=1;AN=184;BQB=0.789826;DP=3027;DP4=1449,1392,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000231559;MQSB=0.991777;RPB=0.561674;SGB=25.1826;VDB=0.181735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1478-S.SNP.6:24911544 chr06:024911544 0 W/24911544-24911544 FN1478-S Single Base Substitution C-T INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN-78.SNP.6:24925927 chr06:024925927 0 W/24925927-24925927 FN-78 Single Base Substitution G-A INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN-169.SNP.6:24927257 chr06:024927257 0 W/24927257-24927257 FN-169 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g41620 retrotransposon protein, putative, unclassified, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3484-S.SNP.6:24930486 chr06:024930486 0 W/24930486-24930486 FN3484-S SNP T -> G AC=1;AN=184;BQB=0.988511;DP=2576;DP4=1226,1211,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.78921e-05;MQSB=0.933656;RPB=0.751386;SGB=21.6609;VDB=0.278559;EFF=INTRON(MODIFIER||||1317|LOC_Os06g41640|protein_coding|CODING|LOC_Os06g41640.1|3|1) FN744-S.SNP.6:24936985 chr06:024936985 0 W/24936985-24936985 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN498-S.SNP.6:24946903 chr06:024946903 0 W/24946903-24946903 FN498-S Single Base Substitution A-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN3568-S.SNP.6:24949430 chr06:024949430 0 W/24949430-24949430 FN3568-S SNP T -> A AC=2;AN=188;BQB=0.92925;DP=2657;DP4=1237,1293,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79319e-16;MQSB=0.925898;RPB=0.541407;SGB=103.307;VDB=0.468094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.6:24953148 chr06:024953148 0 W/24953148-24953148 FN2308 SNP C -> A AC=1;AN=192;BQB=0.870619;DP=5172;DP4=2101,2777,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.21142e-11;MQSB=0.968566;RPB=0.925259;SGB=15.1765;VDB=0.867997;EFF=INTERGENIC(MODIFIER||||||||||1) FN-338.SNP.6:24954328 chr06:024954328 0 W/24954328-24954328 FN-338 Single Base Substitution C-A UTR_3_PRIME HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN1247-S.SNP.6:24959104 chr06:024959104 0 W/24959104-24959104 FN1247-S Single Base Substitution G-T INTRON HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN4132-S.SNP.6:24959563 chr06:024959563 0 W/24959563-24959563 FN4132-S SNP A -> G AC=2;AN=182;BQB=0.996085;DP=2916;DP4=1485,1328,19,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.24441e-20;MQSB=0.960985;RPB=0.798968;SGB=70.8504;VDB=0.498631;EFF=UTR_5_PRIME(MODIFIER||1103||579|LOC_Os06g41670|protein_coding|CODING|LOC_Os06g41670.1|1|1) FN932-S.SNP.6:24960846 chr06:024960846 0 W/24960846-24960846 FN932-S Single Base Substitution T-C INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN3343-S.SNP.6:24963528 chr06:024963528 0 W/24963528-24963528 FN3343-S SNP C -> T AC=2;AN=184;BQB=0.890228;DP=3796;DP4=1753,1874,20,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.21248e-25;MQSB=0.979388;RPB=0.32047;SGB=197.961;VDB=0.354547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G112D|162|LOC_Os06g41680|protein_coding|CODING|LOC_Os06g41680.1|2|1) FN4011-S.SNP.6:24968562 chr06:024968562 0 W/24968562-24968562 FN4011-S SNP C -> T AC=2;AN=168;BQB=0.823204;DP=2994;DP4=1370,1472,24,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.89816e-28;MQSB=0.316463;RPB=0.36213;SGB=49.9768;VDB=0.516545;EFF=SPLICE_SITE_REGION(LOW||||2590|LOC_Os06g41690|protein_coding|CODING|LOC_Os06g41690.1|9|1),INTRON(MODIFIER||||2590|LOC_Os06g41690|protein_coding|CODING|LOC_Os06g41690.1|9|1) FN1665-S.SNP.6:24977175 chr06:024977175 0 W/24977175-24977175 FN1665-S Single Base Substitution T-A INTRON Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN736-S.SNP.6:25003654 chr06:025003654 0 W/25003654-25003654 FN736-S Single Base Substitution G-T INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN3700-S.SNP.6:25006768 chr06:025006768 0 W/25006768-25006768 FN3700-S SNP G -> A AC=1;AN=190;BQB=0.999967;DP=2386;DP4=1171,1117,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.75279e-08;MQSB=0.999681;RPB=0.982119;SGB=58.2031;VDB=0.939964;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.6:25038085 chr06:025038085 0 W/25038085-25038085 FN-368 Single Base Substitution C-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN1548-S.SNP.6:25053167 chr06:025053167 0 W/25053167-25053167 FN1548-S SNP T -> A AC=1;AN=188;BQB=0.959036;DP=3985;DP4=1675,2280,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.29759e-09;MQSB=0.907342;RPB=0.989428;SGB=23.5329;VDB=0.505717;EFF=INTRON(MODIFIER||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.1|4|1),INTRON(MODIFIER||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.2|4|1) FN1548-S.SNP.6:25053168 chr06:025053168 0 W/25053168-25053168 FN1548-S SNP T -> A AC=1;AN=188;BQB=0.172094;DP=3987;DP4=1674,2276,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.92126e-07;MQSB=0.92497;RPB=0.92157;SGB=-86.4405;VDB=0.797809;EFF=SPLICE_SITE_REGION(LOW||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.1|4|1),SPLICE_SITE_REGION(LOW||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.2|4|1),INTRON(MODIFIER||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.1|4|1),INTRON(MODIFIER||||666|LOC_Os06g41780|protein_coding|CODING|LOC_Os06g41780.2|4|1) FN2203-S.SNP.6:25065282 chr06:025065282 0 W/25065282-25065282 FN2203-S SNP G -> A AC=1;AN=190;BQB=0.979052;DP=3260;DP4=1766,1143,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000613497;MQB=4.72838e-07;MQSB=6.63431e-20;RPB=0.980137;SGB=76.4186;VDB=0.992567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.6:25069517 chr06:025069517 0 W/25069517-25069517 FN3310-S SNP A -> G AC=1;AN=184;BQB=0.97731;DP=3108;DP4=1640,1357,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.24523e-14;MQSB=0.9984;RPB=0.58001;SGB=15.9331;VDB=0.606786;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I97T|144|LOC_Os06g41800|protein_coding|CODING|LOC_Os06g41800.1|4|1) FN2411.SNP.6:25072192 chr06:025072192 0 W/25072192-25072192 FN2411 SNP A -> G AC=1;AN=200;BQB=0.954526;DP=2391;DP4=269,1928,2,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38611e-07;MQSB=0.944497;RPB=0.958249;SGB=45.0543;VDB=0.994529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.6:25072876 chr06:025072876 0 W/25072876-25072876 FN1380-S Single Base Substitution T-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2791-S.SNP.6:25075024 chr06:025075024 0 W/25075024-25075024 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.823197;DP=4593;DP4=2103,2266,10,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.42286e-16;MQSB=0.882537;RPB=0.552125;SGB=83.2905;VDB=0.149234;EFF=INTRON(MODIFIER||||321|LOC_Os06g41810|protein_coding|CODING|LOC_Os06g41810.1|3|1) FN2381.SNP.6:25084358 chr06:025084358 0 W/25084358-25084358 FN2381 SNP A -> G AC=1;AN=192;BQB=0.996789;DP=4820;DP4=2003,2562,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000414938;MQB=2.7838e-17;MQSB=0.886978;RPB=0.751424;SGB=100.374;VDB=0.634047;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.6:25085612 chr06:025085612 0 W/25085612-25085612 FN1151-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g41830 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-298.SNP.6:25090465 chr06:025090465 0 W/25090465-25090465 FN-298 Single Base Substitution G-A INTERGENIC HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3490-S.SNP.6:25091440 chr06:025091440 0 W/25091440-25091440 FN3490-S SNP A -> T AC=2;AN=184;BQB=0.896432;DP=2630;DP4=1224,1270,15,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.48373e-19;MQSB=0.935874;RPB=0.630273;SGB=81.2762;VDB=0.495509;EFF=INTERGENIC(MODIFIER||||||||||1) FN_841-7-2.SNP.6:25091835 chr06:025091835 0 W/25091835-25091835 FN_841-7-2 Single Base Substitution G-A HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2583-S.SNP.6:25094689 chr06:025094689 0 W/25094689-25094689 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.643587;DP=4868;DP4=2364,2275,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42687e-12;MQSB=0.755584;RPB=0.999359;SGB=58.2954;VDB=0.555883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.6:25097622 chr06:025097622 0 W/25097622-25097622 FN3396-S SNP C -> T AC=1;AN=184;BQB=0.947179;DP=2743;DP4=1255,1372,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30422e-07;MQSB=0.85942;RPB=0.869802;SGB=44.2207;VDB=0.763155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.6:25103038 chr06:025103038 0 W/25103038-25103038 FN1483-S Single Base Substitution T-G INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN-173.SNP.6:25103688 chr06:025103688 0 W/25103688-25103688 FN-173 Single Base Substitution G-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN1249-S.SNP.6:25116921 chr06:025116921 0 W/25116921-25116921 FN1249-S Single Base Substitution G-A INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN1249-S.SNP.6:25116923 chr06:025116923 0 W/25116923-25116923 FN1249-S Single Base Substitution C-T INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN3416-S.SNP.6:25119825 chr06:025119825 0 W/25119825-25119825 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.957673;DP=2898;DP4=1378,1443,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37799e-05;MQSB=0.999824;RPB=0.995484;SGB=30.6558;VDB=0.163924;EFF=INTRON(MODIFIER||||1001|LOC_Os06g41880|protein_coding|CODING|LOC_Os06g41880.1|1|1) FN_552-1-1.SNP.6:25121669 chr06:025121669 0 W/25121669-25121669 FN_552-1-1 Single Base Substitution A-G Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN405-S.SNP.6:25123683 chr06:025123683 0 W/25123683-25123683 FN405-S Single Base Substitution C-T INTRON HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN2589-S.SNP.6:25126397 chr06:025126397 0 W/25126397-25126397 FN2589-S SNP T -> C AC=1;AN=198;BQB=0.200046;DP=4391;DP4=2147,2023,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.52939e-10;MQSB=0.944039;RPB=0.425498;SGB=63.3342;VDB=0.0833458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.6:25133355 chr06:025133355 0 W/25133355-25133355 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.213303;DP=2005;DP4=1044,875,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0738155;MQB=0.526083;MQSB=0;RPB=0.675288;SGB=20.5959;VDB=0.441507;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.6:25138573 chr06:025138573 0 W/25138573-25138573 FN3896-S SNP G -> T AC=1;AN=158;BQB=0.871171;DP=2441;DP4=1206,1160,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.00163867;MQB=0.000410217;MQSB=0.121932;RPB=0.762933;SGB=23.8187;VDB=0.318781;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E1215*|1562|LOC_Os06g41900|protein_coding|CODING|LOC_Os06g41900.1|7|1);LOF=(LOC_Os06g41900|LOC_Os06g41900|1|1.00);NMD=(LOC_Os06g41900|LOC_Os06g41900|1|1.00) FN1048-S.SNP.6:25148430 chr06:025148430 0 W/25148430-25148430 FN1048-S Single Base Substitution T-A INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3657-S.SNP.6:25155001 chr06:025155001 0 W/25155001-25155001 FN3657-S SNP A -> G AC=1;AN=190;BQB=0.997405;DP=3311;DP4=1480,1723,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.73782e-09;MQSB=0.996153;RPB=0.421544;SGB=58.2031;VDB=0.869984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.6:25164386 chr06:025164386 0 W/25164386-25164386 FN2446 SNP T -> A AC=1;AN=200;BQB=0.98574;DP=4907;DP4=2275,2380,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.40968e-06;MQSB=0.967743;RPB=0.766377;SGB=35.8441;VDB=0.802375;EFF=UTR_3_PRIME(MODIFIER||642||255|LOC_Os06g41930|protein_coding|CODING|LOC_Os06g41930.1|5|1),UTR_3_PRIME(MODIFIER||642||255|LOC_Os06g41930|protein_coding|CODING|LOC_Os06g41930.2|4|1),UTR_3_PRIME(MODIFIER||642||253|LOC_Os06g41930|protein_coding|CODING|LOC_Os06g41930.3|5|1),UTR_3_PRIME(MODIFIER||642||253|LOC_Os06g41930|protein_coding|CODING|LOC_Os06g41930.4|4|1),UTR_3_PRIME(MODIFIER||642||251|LOC_Os06g41930|protein_coding|CODING|LOC_Os06g41930.5|4|1) FN3463-S.SNP.6:25168845 chr06:025168845 0 W/25168845-25168845 FN3463-S SNP A -> T AC=2;AN=184;BQB=0.936768;DP=2877;DP4=1210,1546,10,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.67213e-11;MQSB=0.998278;RPB=0.827989;SGB=89.4385;VDB=0.851084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.6:25170058 chr06:025170058 0 W/25170058-25170058 FN2572-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2220-S.SNP.6:25172377 chr06:025172377 0 W/25172377-25172377 FN2220-S SNP C -> A AC=1;AN=190;BQB=0.966012;DP=2305;DP4=592,1515,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000676483;MQSB=0.961501;RPB=0.953235;SGB=26.3271;VDB=0.0568693;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S95|141|LOC_Os06g41940|protein_coding|CODING|LOC_Os06g41940.1|1|1) FN662-S.SNP.6:25173438 chr06:025173438 0 W/25173438-25173438 FN662-S Single Base Substitution C-A INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN997-S.SNP.6:25193537 chr06:025193537 0 W/25193537-25193537 FN997-S Single Base Substitution G-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN622-S.SNP.6:25194448 chr06:025194448 0 W/25194448-25194448 FN622-S Single Base Substitution T-C INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN730-S.SNP.6:25201002 chr06:025201002 0 W/25201002-25201002 FN730-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g41990 M16 domain containing zinc peptidase, putative, expressed SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN1315-S.SNP.6:25204418 chr06:025204418 0 W/25204418-25204418 FN1315-S Single Base Substitution C-T INTRON HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN3715-S.SNP.6:25210040 chr06:025210040 0 W/25210040-25210040 FN3715-S SNP C -> A AC=1;AN=190;BQB=0.778878;DP=2501;DP4=1145,1242,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32068e-11;MQSB=0.983364;RPB=0.194358;SGB=76.4186;VDB=0.735046;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G123|1246|LOC_Os06g41990|protein_coding|CODING|LOC_Os06g41990.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G123|1246|LOC_Os06g41990|protein_coding|CODING|LOC_Os06g41990.2|2|1) FN3715-S.SNP.6:25210041 chr06:025210041 0 W/25210041-25210041 FN3715-S SNP C -> T AC=1;AN=190;BQB=0.615044;DP=2507;DP4=1142,1248,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23303e-11;MQSB=0.919532;RPB=0.337318;SGB=53.8699;VDB=0.609945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G123E|1246|LOC_Os06g41990|protein_coding|CODING|LOC_Os06g41990.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G123E|1246|LOC_Os06g41990|protein_coding|CODING|LOC_Os06g41990.2|2|1) FN2197-S.SNP.6:25211170 chr06:025211170 0 W/25211170-25211170 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.137906;DP=4981;DP4=2398,2338,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.3224e-08;MQSB=0.449615;RPB=0.889284;SGB=10.3266;VDB=0.72998;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.6:25211246 chr06:025211246 0 W/25211246-25211246 FN664-S Single Base Substitution T-A INTERGENIC HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN664-S.SNP.6:25211249 chr06:025211249 0 W/25211249-25211249 FN664-S Single Base Substitution T-A INTERGENIC HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN2730-S.SNP.6:25213505 chr06:025213505 0 W/25213505-25213505 FN2730-S SNP C -> T AC=1;AN=200;BQB=0.993652;DP=5318;DP4=2688,2322,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15372e-07;MQSB=0.388558;RPB=0.959612;SGB=29.4541;VDB=0.421703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.6:25216196 chr06:025216196 0 W/25216196-25216196 FN2080-S SNP T -> C AC=1;AN=168;BQB=0.400666;DP=1725;DP4=927,745,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.85256e-05;MQSB=0.980823;RPB=0.991032;SGB=1.32907;VDB=0.980738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.6:25220246 chr06:025220246 0 W/25220246-25220246 FN2218-S SNP T -> C AC=1;AN=190;BQB=0.896625;DP=4817;DP4=2243,2172,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82812e-10;MQSB=0.993595;RPB=0.730932;SGB=36.4291;VDB=0.348672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.6:25228647 chr06:025228647 0 W/25228647-25228647 FN3899-S SNP T -> C AC=1;AN=158;BQB=0.974772;DP=2312;DP4=1044,1177,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.48543e-07;MQSB=0.98269;RPB=0.426899;SGB=27.3346;VDB=0.155926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.6:25228940 chr06:025228940 0 W/25228940-25228940 FN3993-S SNP C -> A AC=1;AN=168;BQB=0.992577;DP=2515;DP4=1172,1271,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22526e-09;MQSB=0.998822;RPB=0.823455;SGB=61.0344;VDB=0.623724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.6:25231120 chr06:025231120 0 W/25231120-25231120 FN3990-S SNP C -> G AC=2;AN=168;BQB=0.991202;DP=2284;DP4=1304,837,22,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.35438e-15;MQSB=0.960641;RPB=0.75933;SGB=106.795;VDB=0.725337;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.6:25231596 chr06:025231596 0 W/25231596-25231596 FN1475-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g42020 CSLA9 - cellulose synthase-like family A, expressed SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2599-S.SNP.6:25235374 chr06:025235374 0 W/25235374-25235374 FN2599-S SNP T -> G AC=2;AN=198;BQB=0.870328;DP=4318;DP4=2160,1869,25,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.84992e-25;MQSB=0.808691;RPB=0.999809;SGB=49.2274;VDB=0.815069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L504R|527|LOC_Os06g42020|protein_coding|CODING|LOC_Os06g42020.1|9|1),UTR_3_PRIME(MODIFIER||2965||843|LOC_Os06g42030|protein_coding|CODING|LOC_Os06g42030.1|9|1) FN500-S.SNP.6:25243708 chr06:025243708 0 W/25243708-25243708 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN454-S.SNP.6:25249901 chr06:025249901 0 W/25249901-25249901 FN454-S Single Base Substitution G-A INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN672-S.SNP.6:25250331 chr06:025250331 0 W/25250331-25250331 FN672-S Single Base Substitution T-A INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN672-S.SNP.6:25250332 chr06:025250332 0 W/25250332-25250332 FN672-S Single Base Substitution T-C INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1173-S.SNP.6:25255345 chr06:025255345 0 W/25255345-25255345 FN1173-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1173-S.SNP.6:25255346 chr06:025255346 0 W/25255346-25255346 FN1173-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1515-S.SNP.6:25261896 chr06:025261896 0 W/25261896-25261896 FN1515-S Single Base Substitution C-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN3893-S.SNP.6:25262300 chr06:025262300 0 W/25262300-25262300 FN3893-S SNP A -> G AC=1;AN=158;BQB=0.949949;DP=2273;DP4=1213,980,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.0001293;MQSB=0.566834;RPB=0.605421;SGB=33.9591;VDB=0.563889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.6:25263014 chr06:025263014 0 W/25263014-25263014 FN-325 Single Base Substitution C-T INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2138-S.SNP.6:25263784 chr06:025263784 0 W/25263784-25263784 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.73478;DP=3825;DP4=1807,1933,17,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.6201e-17;MQSB=0.986768;RPB=0.906294;SGB=-7.187;VDB=0.307838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.6:25266108 chr06:025266108 0 W/25266108-25266108 FN1402-S Single Base Substitution G-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN680-S.SNP.6:25269853 chr06:025269853 0 W/25269853-25269853 FN680-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2300.SNP.6:25270530 chr06:025270530 0 W/25270530-25270530 FN2300 SNP A -> C AC=1;AN=192;BQB=0.325766;DP=4796;DP4=1948,2164,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.96343e-10;MQSB=0.0442778;RPB=0.982259;SGB=85.7252;VDB=0.0179282;EFF=UTR_5_PRIME(MODIFIER||245||146|LOC_Os06g42060|protein_coding|CODING|LOC_Os06g42060.1|1|1),UTR_5_PRIME(MODIFIER||245||116|LOC_Os06g42060|protein_coding|CODING|LOC_Os06g42060.2|1|1) FN2560-S.SNP.6:25270704 chr06:025270704 0 W/25270704-25270704 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.170894;DP=4349;DP4=2294,1869,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00046241;MQSB=0.614613;RPB=0.996557;SGB=29.3637;VDB=0.819359;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.6:25272593 chr06:025272593 0 W/25272593-25272593 W23-2-1 Single Base Substitution A-T INTRON HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2359.SNP.6:25280635 chr06:025280635 0 W/25280635-25280635 FN2359 SNP T -> C AC=1;AN=192;BQB=0.301624;DP=8283;DP4=4567,3225,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.100326;MQB=0.0571807;MQSB=3.91011e-27;RPB=0.909056;SGB=54.0374;VDB=0.940258;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N767S|819|LOC_Os06g42090|protein_coding|CODING|LOC_Os06g42090.1|5|1) FN1399-S.SNP.6:25285806 chr06:025285806 0 W/25285806-25285806 FN1399-S Single Base Substitution A-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN512-S.SNP.6:25288518 chr06:025288518 0 W/25288518-25288518 FN512-S Single Base Substitution A-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN-89.SNP.6:25290867 chr06:025290867 0 W/25290867-25290867 FN-89 Single Base Substitution T-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2295.SNP.6:25291979 chr06:025291979 0 W/25291979-25291979 FN2295 SNP G -> A AC=1;AN=192;BQB=0.900579;DP=4612;DP4=1936,2425,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=5.2804e-08;MQSB=0.481481;RPB=0.92386;SGB=5.79046;VDB=0.910016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A137T|161|LOC_Os06g42110|protein_coding|CODING|LOC_Os06g42110.1|1|1) FN2260-S.SNP.6:25294049 chr06:025294049 0 W/25294049-25294049 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.934474;DP=4980;DP4=2505,2137,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49978e-07;MQSB=0.873859;RPB=0.927225;SGB=5.66499;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.6:25302095 chr06:025302095 0 W/25302095-25302095 FN1082-S Single Base Substitution C-G INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN1532-S.SNP.6:25308547 chr06:025308547 0 W/25308547-25308547 FN1532-S Single Base Substitution A-C INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN4311-S.SNP.6:25311359 chr06:025311359 0 W/25311359-25311359 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.993274;DP=2461;DP4=1135,1264,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.42113e-05;MQSB=0.292724;RPB=0.567162;SGB=30.1021;VDB=0.77747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T3I|319|LOC_Os06g42160|protein_coding|CODING|LOC_Os06g42160.1|1|1) FN2349.SNP.6:25314809 chr06:025314809 0 W/25314809-25314809 FN2349 SNP G -> A AC=1;AN=192;BQB=0.853723;DP=4964;DP4=2204,2299,21,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23083e-16;MQSB=0.989122;RPB=0.865403;SGB=27.6913;VDB=0.137854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.6:25314837 chr06:025314837 0 W/25314837-25314837 FN3713-S SNP C -> A AC=1;AN=190;BQB=0.992534;DP=2822;DP4=1358,1370,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23152e-06;MQSB=0.672683;RPB=0.993107;SGB=39.9877;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.6:25316947 chr06:025316947 0 W/25316947-25316947 FN3994-S SNP T -> C AC=2;AN=168;BQB=0.929852;DP=2369;DP4=1303,902,12,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.15499e-19;MQSB=0.912713;RPB=0.868079;SGB=93.0718;VDB=0.933218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.6:25316950 chr06:025316950 0 W/25316950-25316950 FN3994-S SNP G -> A AC=2;AN=168;BQB=0.853176;DP=2360;DP4=1350,915,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.86334e-20;MQSB=0.89428;RPB=0.497674;SGB=96.5026;VDB=0.949669;EFF=INTERGENIC(MODIFIER||||||||||1) FN925-S.SNP.6:25318233 chr06:025318233 0 W/25318233-25318233 FN925-S Single Base Substitution C-A INTERGENIC HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN406-S.SNP.6:25322197 chr06:025322197 0 W/25322197-25322197 FN406-S Single Base Substitution C-G INTERGENIC HOMO SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN2140-S.SNP.6:25323014 chr06:025323014 0 W/25323014-25323014 FN2140-S SNP G -> T AC=1;AN=168;BQB=0.764955;DP=2858;DP4=1012,1801,13,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.61736e-16;MQSB=0.706383;RPB=0.992605;SGB=61.0778;VDB=0.703194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K71N|104|LOC_Os06g42180|protein_coding|CODING|LOC_Os06g42180.1|2|1),SPLICE_SITE_REGION(LOW||||104|LOC_Os06g42180|protein_coding|CODING|LOC_Os06g42180.1|2|1) FN2597-S.SNP.6:25323260 chr06:025323260 0 W/25323260-25323260 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.867788;DP=4142;DP4=1888,2091,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.51797e-08;MQSB=0.910464;RPB=0.928918;SGB=16.3688;VDB=0.202123;EFF=INTRON(MODIFIER||||104|LOC_Os06g42180|protein_coding|CODING|LOC_Os06g42180.1|2|1) FN910-S.SNP.6:25325367 chr06:025325367 0 W/25325367-25325367 FN910-S Single Base Substitution G-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN-127.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN-127 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-99.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN-99 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1152-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN1152-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1419-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN1419-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1681-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN1681-S SNP C -> A AC=2;AN=188;BQB=0.135863;DP=1484;DP4=629,774,6,17;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.0303234;MQB=0.00150605;MQSB=2.18241e-05;RPB=0.119482;SGB=-43.8509;VDB=0.833413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1048C|1054|LOC_Os06g42200|protein_coding|CODING|LOC_Os06g42200.1|2|1) FN3388-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN3388-S SNP C -> A AC=2;AN=184;BQB=0.949033;DP=4432;DP4=2400,1734,123,41;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0.0591155;MQB=0;MQSB=0.982343;RPB=5.53047e-06;SGB=-1663.83;VDB=0.0214626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1048C|1054|LOC_Os06g42200|protein_coding|CODING|LOC_Os06g42200.1|2|1) FN3846-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN3846-S SNP C -> A AC=2;AN=190;BQB=0.794801;DP=3474;DP4=1759,1438,109,37;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0710996;MQB=0;MQSB=0.156394;RPB=8.81898e-07;SGB=-2131.17;VDB=0.00241322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1048C|1054|LOC_Os06g42200|protein_coding|CODING|LOC_Os06g42200.1|2|1) FN3976-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN3976-S SNP C -> A AC=1;AN=168;BQB=0.918971;DP=3189;DP4=1624,1346,82,17;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0614613;MQB=3.8816e-43;MQSB=0.163381;RPB=2.27808e-06;SGB=-1571.42;VDB=0.0507725;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1048C|1054|LOC_Os06g42200|protein_coding|CODING|LOC_Os06g42200.1|2|1) FN4117-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN4117-S SNP C -> A AC=2;AN=182;BQB=0.926069;DP=3736;DP4=1959,1497,153,29;HOB=0.0217365;ICB=0.494567;MQ=32;MQ0F=0.0902034;MQB=0;MQSB=4.4268e-07;RPB=1.02258e-08;SGB=-2044.16;VDB=0.0112611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1048C|1054|LOC_Os06g42200|protein_coding|CODING|LOC_Os06g42200.1|2|1) FN440-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN440-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN936-S.SNP.6:25334967 chr06:025334967 0 W/25334967-25334967 FN936-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN521-S.SNP.6:25337731 chr06:025337731 0 W/25337731-25337731 FN521-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN1392-S.SNP.6:25338047 chr06:025338047 0 W/25338047-25338047 FN1392-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3533-S.SNP.6:25344995 chr06:025344995 0 W/25344995-25344995 FN3533-S SNP A -> T AC=1;AN=188;BQB=0.745846;DP=2928;DP4=1201,1569,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35146e-07;MQSB=0.850727;RPB=0.446889;SGB=0.908326;VDB=0.484574;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.6:25347189 chr06:025347189 0 W/25347189-25347189 FN-349 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN4044-S.SNP.6:25348553 chr06:025348553 0 W/25348553-25348553 FN4044-S SNP G -> C AC=1;AN=168;BQB=0.80578;DP=2705;DP4=1344,1225,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000385942;MQSB=0.326226;RPB=0.335161;SGB=38.8805;VDB=0.491369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P28R|443|LOC_Os06g42220|protein_coding|CODING|LOC_Os06g42220.1|1|1) FN3630-S.SNP.6:25349222 chr06:025349222 0 W/25349222-25349222 FN3630-S SNP A -> T AC=1;AN=190;BQB=0.997184;DP=2767;DP4=1318,1232,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000127102;MQSB=0.99296;RPB=0.858905;SGB=32.5467;VDB=0.0848711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.6:25369103 chr06:025369103 0 W/25369103-25369103 FN2574-S SNP C -> T AC=1;AN=198;BQB=0.364868;DP=3665;DP4=1833,1615,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.34175e-07;MQSB=0.00236953;RPB=0.190109;SGB=21.559;VDB=0.654031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.6:25369197 chr06:025369197 0 W/25369197-25369197 FN1173-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1707-S.SNP.6:25369291 chr06:025369291 0 W/25369291-25369291 FN1707-S SNP C -> A AC=1;AN=188;BQB=0.994005;DP=2196;DP4=1095,1046,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.86769e-05;MQSB=0.188365;RPB=0.439809;SGB=32.441;VDB=0.244287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.6:25370356 chr06:025370356 0 W/25370356-25370356 FN2184-S SNP G -> A AC=1;AN=190;BQB=0.00960783;DP=3535;DP4=1562,1535,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00736565;MQSB=0.050714;RPB=0.520613;SGB=10.8904;VDB=0.794525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.6:25372163 chr06:025372163 0 W/25372163-25372163 FN2755-S SNP A -> T AC=1;AN=200;BQB=0.564547;DP=5904;DP4=3256,2435,14,8;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0956978;MQB=0.866707;MQSB=0;RPB=0.639663;SGB=15.9106;VDB=0.767696;EFF=INTRON(MODIFIER||||961|LOC_Os06g42250|protein_coding|CODING|LOC_Os06g42250.1|1|1) FN-81.SNP.6:25376669 chr06:025376669 0 W/25376669-25376669 FN-81 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1048-S.SNP.6:25390116 chr06:025390116 0 W/25390116-25390116 FN1048-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g42280 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN832-S.SNP.6:25390942 chr06:025390942 0 W/25390942-25390942 FN832-S Single Base Substitution A-G INTRON HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN3679-S.SNP.6:25391518 chr06:025391518 0 W/25391518-25391518 FN3679-S SNP C -> A AC=1;AN=190;BQB=0.800434;DP=2308;DP4=863,1328,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.66983e-05;MQSB=0.400622;RPB=0.812503;SGB=28.9929;VDB=0.861107;EFF=INTRON(MODIFIER||||1214|LOC_Os06g42280|protein_coding|CODING|LOC_Os06g42280.1|4|1) FN1357-S.SNP.6:25401729 chr06:025401729 0 W/25401729-25401729 FN1357-S Single Base Substitution C-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1357-S.SNP.6:25401730 chr06:025401730 0 W/25401730-25401730 FN1357-S Single Base Substitution A-G INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1094-S.SNP.6:25402002 chr06:025402002 0 W/25402002-25402002 FN1094-S Single Base Substitution G-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN911-S.SNP.6:25405906 chr06:025405906 0 W/25405906-25405906 FN911-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g42300 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3661-S.SNP.6:25410167 chr06:025410167 0 W/25410167-25410167 FN3661-S SNP A -> G AC=1;AN=190;BQB=0.999985;DP=2624;DP4=1243,1283,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26071e-07;MQSB=0.957181;RPB=0.596621;SGB=1.00337;VDB=0.281535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.6:25423806 chr06:025423806 0 W/25423806-25423806 FN3525-S SNP C -> T AC=1;AN=188;BQB=0.421389;DP=3023;DP4=1448,1497,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00155613;MQSB=0.836231;RPB=0.987043;SGB=39.8925;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.6:25426378 chr06:025426378 0 W/25426378-25426378 FN3771-S SNP T -> G AC=1;AN=190;BQB=0.962318;DP=2193;DP4=945,1166,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49357e-08;MQSB=0.995071;RPB=0.948201;SGB=36.1006;VDB=0.836523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.6:25431684 chr06:025431684 0 W/25431684-25431684 FN2558-S SNP C -> A AC=2;AN=198;BQB=0.090111;DP=4411;DP4=2096,2042,25,28;HOB=0.019998;ICB=0.495001;MQ=41;MQ0F=0.01927;MQB=0.078635;MQSB=2.95896e-12;RPB=0.981349;SGB=122.769;VDB=0.999812;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.6:25433218 chr06:025433218 0 W/25433218-25433218 FN494-S Single Base Substitution G-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN4143-S.SNP.6:25433531 chr06:025433531 0 W/25433531-25433531 FN4143-S SNP T -> C AC=1;AN=170;BQB=0.243819;DP=3582;DP4=1584,1848,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0452261;MQB=0.994294;MQSB=0.651176;RPB=0.994064;SGB=4.33246;VDB=0.969785;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.6:25435764 chr06:025435764 0 W/25435764-25435764 FN3657-S SNP A -> G AC=1;AN=190;BQB=0.793523;DP=2228;DP4=1218,909,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000448833;MQB=2.19681e-05;MQSB=0.336692;RPB=0.513151;SGB=49.0954;VDB=0.0206746;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.6:25435764 chr06:025435764 0 W/25435764-25435764 FN706-S Single Base Substitution A-G INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN788-S.SNP.6:25436219 chr06:025436219 0 W/25436219-25436219 FN788-S Single Base Substitution C-T INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN_789-2-1.SNP.6:25447842 chr06:025447842 0 W/25447842-25447842 FN_789-2-1 Single Base Substitution A-C Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-3-1.SNP.6:25447842 chr06:025447842 0 W/25447842-25447842 FN_789-3-1 Single Base Substitution A-C INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2265-S.SNP.6:25451093 chr06:025451093 0 W/25451093-25451093 FN2265-S SNP G -> C AC=1;AN=190;BQB=0.563184;DP=2753;DP4=1881,690,17,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00217944;MQB=1.65198e-09;MQSB=2.77598e-09;RPB=0.750136;SGB=94.6341;VDB=0.534313;EFF=INTRON(MODIFIER||||696|LOC_Os06g42350|protein_coding|CODING|LOC_Os06g42350.1|2|1) FN1379-S.SNP.6:25455641 chr06:025455641 0 W/25455641-25455641 FN1379-S Single Base Substitution G-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN918-S.SNP.6:25458855 chr06:025458855 0 W/25458855-25458855 FN918-S Single Base Substitution G-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2324.SNP.6:25463080 chr06:025463080 0 W/25463080-25463080 FN2324 SNP T -> A AC=1;AN=192;BQB=0.928201;DP=4834;DP4=2318,2281,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000206868;MQB=7.44027e-10;MQSB=0.0067887;RPB=0.135034;SGB=18.3052;VDB=0.457579;EFF=INTRON(MODIFIER||||1914|LOC_Os06g42370|protein_coding|CODING|LOC_Os06g42370.1|6|1) FN1319-S.SNP.6:25469519 chr06:025469519 0 W/25469519-25469519 FN1319-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2739-S.SNP.6:25471092 chr06:025471092 0 W/25471092-25471092 FN2739-S SNP T -> C AC=1;AN=200;BQB=0.42466;DP=4981;DP4=2502,2275,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.41139e-11;MQSB=0.98487;RPB=0.909345;SGB=58.2954;VDB=0.78927;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.6:25472902 chr06:025472902 0 W/25472902-25472902 FN919-S Single Base Substitution G-A INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2785-S.SNP.6:25473828 chr06:025473828 0 W/25473828-25473828 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.430142;DP=4046;DP4=1909,1881,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0938e-10;MQSB=0.991782;RPB=0.738027;SGB=10.9445;VDB=0.720337;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I422|1113|LOC_Os06g42380|protein_coding|CODING|LOC_Os06g42380.1|4|1) FN2602-S.SNP.6:25474066 chr06:025474066 0 W/25474066-25474066 FN2602-S SNP C -> A AC=1;AN=198;BQB=0.980634;DP=3951;DP4=1754,2021,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.87297e-11;MQSB=0.86353;RPB=0.154556;SGB=86.3098;VDB=0.40956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L502M|1113|LOC_Os06g42380|protein_coding|CODING|LOC_Os06g42380.1|4|1) FN2240-S.SNP.6:25475795 chr06:025475795 0 W/25475795-25475795 FN2240-S SNP G -> A AC=1;AN=190;BQB=0.786485;DP=4690;DP4=2175,2235,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.90426e-06;MQSB=0.895408;RPB=0.996536;SGB=21.8853;VDB=0.466689;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T1019|1113|LOC_Os06g42380|protein_coding|CODING|LOC_Os06g42380.1|5|1) FN3453-S.SNP.6:25480592 chr06:025480592 0 W/25480592-25480592 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.992588;DP=3989;DP4=1950,1896,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.264227;MQB=0.140479;MQSB=0;RPB=0.922199;SGB=75.8731;VDB=0.766256;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.6:25486077 chr06:025486077 0 W/25486077-25486077 FN1050-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g42400 transposon protein, putative, unclassified, expressed SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2721-S.SNP.6:25489960 chr06:025489960 0 W/25489960-25489960 FN2721-S SNP T -> C AC=2;AN=200;BQB=0.313621;DP=5055;DP4=2590,2274,14,15;HOB=0.0198;ICB=0.495051;MQ=15;MQ0F=0.422552;MQB=0.0204843;MQSB=0;RPB=0.912799;SGB=94.3471;VDB=0.0907132;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V231|758|LOC_Os06g42410|protein_coding|CODING|LOC_Os06g42410.1|2|1) FN4064-S.SNP.6:25501439 chr06:025501439 0 W/25501439-25501439 FN4064-S SNP G -> T AC=2;AN=168;BQB=0.831866;DP=2408;DP4=1133,1181,7,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20473e-05;MQSB=0.809827;RPB=0.763308;SGB=47.7421;VDB=0.0492037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D150Y|179|LOC_Os06g42430|protein_coding|CODING|LOC_Os06g42430.1|3|1) FN1356-S.SNP.6:25502553 chr06:025502553 0 W/25502553-25502553 FN1356-S Single Base Substitution C-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN908-S.SNP.6:25510673 chr06:025510673 0 W/25510673-25510673 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1483-S.SNP.6:25513267 chr06:025513267 0 W/25513267-25513267 FN1483-S Single Base Substitution G-A INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1483-S.SNP.6:25513268 chr06:025513268 0 W/25513268-25513268 FN1483-S Single Base Substitution C-A INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN3857-S.SNP.6:25514594 chr06:025514594 0 W/25514594-25514594 FN3857-S SNP G -> A AC=1;AN=158;BQB=0.981648;DP=2614;DP4=1268,1236,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.2924e-10;MQSB=0.996738;RPB=0.0596857;SGB=6.19449;VDB=0.22938;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.6:25516656 chr06:025516656 0 W/25516656-25516656 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1026-S.SNP.6:25520915 chr06:025520915 0 W/25520915-25520915 FN1026-S Single Base Substitution G-C INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2302.SNP.6:25525109 chr06:025525109 0 W/25525109-25525109 FN2302 SNP G -> A AC=1;AN=192;BQB=0.335885;DP=4645;DP4=2028,2262,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.07158e-12;MQSB=0.474488;RPB=0.99563;SGB=64.7304;VDB=0.0219849;EFF=START_GAINED(LOW||||139|LOC_Os06g42470|protein_coding|CODING|LOC_Os06g42470.1|1|1),UTR_5_PRIME(MODIFIER||82||139|LOC_Os06g42470|protein_coding|CODING|LOC_Os06g42470.1|1|1) FN2252-S.SNP.6:25530706 chr06:025530706 0 W/25530706-25530706 FN2252-S SNP A -> G AC=1;AN=190;BQB=0.990159;DP=4858;DP4=2070,2536,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24421e-09;MQSB=0.944309;RPB=0.728892;SGB=62.7569;VDB=0.583238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.6:25531392 chr06:025531392 0 W/25531392-25531392 FN2557-S SNP T -> A AC=1;AN=198;BQB=0.238566;DP=3892;DP4=1610,2034,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000256937;MQB=3.93436e-08;MQSB=0.651818;RPB=0.772946;SGB=-13.8358;VDB=0.120459;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.6:25534039 chr06:025534039 0 W/25534039-25534039 FN1708-S SNP T -> G AC=1;AN=188;BQB=0.684559;DP=3113;DP4=1793,1278,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.50976e-08;MQSB=0.979198;RPB=0.891233;SGB=43.0708;VDB=0.838624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.6:25538880 chr06:025538880 0 W/25538880-25538880 FN1644-S Single Base Substitution T-A INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3853-S.SNP.6:25541193 chr06:025541193 0 W/25541193-25541193 FN3853-S SNP C -> T AC=1;AN=158;BQB=0.999575;DP=2733;DP4=1155,1459,6,17;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.6204e-12;MQSB=0.93909;RPB=0.0211354;SGB=95.131;VDB=0.104079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.6:25562739 chr06:025562739 0 W/25562739-25562739 FN3056-S SNP C -> T AC=1;AN=184;BQB=0.867104;DP=1322;DP4=672,594,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00422206;MQSB=0.000651277;RPB=0.158733;SGB=26.1347;VDB=0.0201525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.6:25562800 chr06:025562800 0 W/25562800-25562800 FN1196-S Single Base Substitution T-C INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN931-S.SNP.6:25566024 chr06:025566024 0 W/25566024-25566024 FN931-S Single Base Substitution G-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN4173-S.SNP.6:25569069 chr06:025569069 0 W/25569069-25569069 FN4173-S SNP C -> A AC=1;AN=170;BQB=0.67917;DP=1740;DP4=1232,392,14,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.77157e-06;MQSB=0.870609;RPB=0.891846;SGB=22.3266;VDB=0.704505;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.6:25569311 chr06:025569311 0 W/25569311-25569311 FN742-S Single Base Substitution T-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN863-S.SNP.6:25571408 chr06:025571408 0 W/25571408-25571408 FN863-S Single Base Substitution G-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2191-S.SNP.6:25573534 chr06:025573534 0 W/25573534-25573534 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.999683;DP=4535;DP4=1969,2221,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61147e-09;MQSB=0.989331;RPB=0.0766089;SGB=31.3213;VDB=0.528533;EFF=INTRON(MODIFIER||||998|LOC_Os06g42520|protein_coding|CODING|LOC_Os06g42520.1|1|1) FN-78.SNP.6:25573907 chr06:025573907 0 W/25573907-25573907 FN-78 Single Base Substitution G-A INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3447-S.SNP.6:25573932 chr06:025573932 0 W/25573932-25573932 FN3447-S SNP T -> A AC=2;AN=184;BQB=0.0412467;DP=1160;DP4=484,476,7,5;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=0.0093484;MQSB=0.0141051;RPB=0.911932;SGB=-0.806606;VDB=0.361025;EFF=INTRON(MODIFIER||||998|LOC_Os06g42520|protein_coding|CODING|LOC_Os06g42520.1|1|1) FN3283-S.SNP.6:25579581 chr06:025579581 0 W/25579581-25579581 FN3283-S SNP A -> T AC=1;AN=184;BQB=0.998684;DP=2830;DP4=1423,1294,13,3;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.365724;MQB=0.025254;MQSB=0;RPB=0.674769;SGB=46.3132;VDB=0.150845;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.6:25579582 chr06:025579582 0 W/25579582-25579582 FN3283-S SNP A -> T AC=1;AN=184;BQB=0.990508;DP=2833;DP4=1433,1258,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.354042;MQB=0.0183237;MQSB=0;RPB=0.46915;SGB=46.3132;VDB=0.251293;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.6:25583917 chr06:025583917 0 W/25583917-25583917 FN_949-1 Single Base Substitution A-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1441-S.SNP.6:25589539 chr06:025589539 0 W/25589539-25589539 FN1441-S Single Base Substitution C-T INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN718-S.SNP.6:25596569 chr06:025596569 0 W/25596569-25596569 FN718-S Single Base Substitution T-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN_815-4-1.SNP.6:25598792 chr06:025598792 0 W/25598792-25598792 FN_815-4-1 Single Base Substitution T-A Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN-101.SNP.6:25598911 chr06:025598911 0 W/25598911-25598911 FN-101 Single Base Substitution G-A INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1382-S.SNP.6:25598911 chr06:025598911 0 W/25598911-25598911 FN1382-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. W607-2-1.SNP.6:25598911 chr06:025598911 0 W/25598911-25598911 W607-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN457-S.SNP.6:25599407 chr06:025599407 0 W/25599407-25599407 FN457-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN1028-S.SNP.6:25600445 chr06:025600445 0 W/25600445-25600445 FN1028-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g42570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN4231-S.SNP.6:25605081 chr06:025605081 0 W/25605081-25605081 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.983583;DP=2050;DP4=882,1128,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000487805;MQB=8.64977e-08;MQSB=0.867725;RPB=0.964845;SGB=56.7575;VDB=0.433274;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.6:25613392 chr06:025613392 0 W/25613392-25613392 FN-392 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g42590 retrotransposon protein, putative, unclassified, expressed SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2378.SNP.6:25614011 chr06:025614011 0 W/25614011-25614011 FN2378 SNP G -> C AC=1;AN=192;BQB=0.995362;DP=4682;DP4=1686,2407,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00961128;MQB=0.000141435;MQSB=6.58011e-07;RPB=0.999021;SGB=44.3;VDB=0.437369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q922H|1604|LOC_Os06g42590|protein_coding|CODING|LOC_Os06g42590.1|4|1) FN2459.SNP.6:25618424 chr06:025618424 0 W/25618424-25618424 FN2459 SNP G -> A AC=1;AN=200;BQB=0.760653;DP=3489;DP4=1572,1634,9,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00544569;MQB=2.64e-07;MQSB=0.0181787;RPB=0.483832;SGB=63.4749;VDB=0.334496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A435V|887|LOC_Os06g42600|protein_coding|CODING|LOC_Os06g42600.1|3|1),SPLICE_SITE_REGION(LOW||||887|LOC_Os06g42600|protein_coding|CODING|LOC_Os06g42600.1|3|1) FN2794-S.SNP.6:25618470 chr06:025618470 0 W/25618470-25618470 FN2794-S SNP G -> A AC=2;AN=198;BQB=0.999897;DP=3832;DP4=1627,1912,34,24;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.0125261;MQB=3.76682e-14;MQSB=3.35863e-05;RPB=0.0263566;SGB=188.178;VDB=0.621056;EFF=INTRON(MODIFIER||||887|LOC_Os06g42600|protein_coding|CODING|LOC_Os06g42600.1|2|1) FN1481-S.SNP.6:25622927 chr06:025622927 0 W/25622927-25622927 FN1481-S Single Base Substitution A-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2667-S.SNP.6:25627351 chr06:025627351 0 W/25627351-25627351 FN2667-S SNP A -> G AC=1;AN=200;BQB=0.852132;DP=4630;DP4=2187,2226,11,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08863e-19;MQSB=0.902602;RPB=0.465085;SGB=39.9882;VDB=0.528868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.6:25638913 chr06:025638913 0 W/25638913-25638913 FN2484 SNP C -> A AC=1;AN=200;BQB=0.503579;DP=4642;DP4=1617,2794,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.63771e-11;MQSB=0.857581;RPB=0.964113;SGB=72.7161;VDB=0.87172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.6:25638949 chr06:025638949 0 W/25638949-25638949 FN2187-S SNP C -> T AC=1;AN=190;BQB=0.997707;DP=5393;DP4=2048,2949,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.90062e-11;MQSB=0.497;RPB=0.687199;SGB=-11.5603;VDB=0.90499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.6:25648097 chr06:025648097 0 W/25648097-25648097 FN2557-S SNP G -> A AC=1;AN=198;BQB=0.653954;DP=4086;DP4=2076,1777,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.06349e-09;MQSB=0.919994;RPB=0.665593;SGB=-15.026;VDB=0.0574696;EFF=INTRON(MODIFIER||||354|LOC_Os06g42650|protein_coding|CODING|LOC_Os06g42650.1|5|1) FN763-S.SNP.6:25650984 chr06:025650984 0 W/25650984-25650984 FN763-S Single Base Substitution G-A INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3790-S.SNP.6:25653899 chr06:025653899 0 W/25653899-25653899 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.779356;DP=2800;DP4=1621,1030,15,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.81922e-11;MQSB=0.844253;RPB=0.875299;SGB=13.4344;VDB=0.633343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.6:25654994 chr06:025654994 0 W/25654994-25654994 FN1115-S Single Base Substitution G-C INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3356-S.SNP.6:25663129 chr06:025663129 0 W/25663129-25663129 FN3356-S SNP T -> C AC=2;AN=184;BQB=0.855371;DP=2714;DP4=1374,1241,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.06547e-13;MQSB=0.888086;RPB=0.708945;SGB=45.9712;VDB=0.823957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.6:25664329 chr06:025664329 0 W/25664329-25664329 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.792876;DP=2742;DP4=2387,197,19,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.98436e-12;MQSB=0.868616;RPB=0.933044;SGB=12.7003;VDB=0.313711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.6:25675807 chr06:025675807 0 W/25675807-25675807 FN2551-S SNP G -> C AC=1;AN=198;BQB=0.622097;DP=3953;DP4=1992,1697,18,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00558e-14;MQSB=0.923639;RPB=0.914265;SGB=83.2905;VDB=0.77359;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.6:25683013 chr06:025683013 0 W/25683013-25683013 FN1339-S Single Base Substitution G-A INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN514-S.SNP.6:25683839 chr06:025683839 0 W/25683839-25683839 FN514-S Single Base Substitution A-T INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2662-S.SNP.6:25686973 chr06:025686973 0 W/25686973-25686973 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.956554;DP=5139;DP4=2462,2440,8,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00019459;MQB=1.80147e-06;MQSB=0.06615;RPB=0.502078;SGB=49.6594;VDB=0.268133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V597M|878|LOC_Os06g42710|protein_coding|CODING|LOC_Os06g42710.1|4|1) FN2212-S.SNP.6:25687546 chr06:025687546 0 W/25687546-25687546 FN2212-S SNP G -> A AC=1;AN=190;BQB=0.0864657;DP=4602;DP4=1889,2444,15,18;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.5524e-11;MQSB=1.51548e-06;RPB=0.895687;SGB=107.178;VDB=0.936759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A732T|878|LOC_Os06g42710|protein_coding|CODING|LOC_Os06g42710.1|5|1) FN911-S.SNP.6:25699489 chr06:025699489 0 W/25699489-25699489 FN911-S Single Base Substitution C-A INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN722-S.SNP.6:25701969 chr06:025701969 0 W/25701969-25701969 FN722-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN722-S.SNP.6:25701977 chr06:025701977 0 W/25701977-25701977 FN722-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g42730 OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN-126.SNP.6:25703354 chr06:025703354 0 W/25703354-25703354 FN-126 Single Base Substitution T-C INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN-126.SNP.6:25703355 chr06:025703355 0 W/25703355-25703355 FN-126 Single Base Substitution T-C INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN-153.SNP.6:25706236 chr06:025706236 0 W/25706236-25706236 FN-153 Single Base Substitution A-T INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1759-S.SNP.6:25706396 chr06:025706396 0 W/25706396-25706396 FN1759-S SNP A -> T AC=2;AN=188;BQB=0.965945;DP=3707;DP4=1925,1725,21,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.11113e-18;MQSB=0.988337;RPB=0.231813;SGB=74.3988;VDB=0.208525;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.6:25707239 chr06:025707239 0 W/25707239-25707239 FN903-S Single Base Substitution G-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN2257-S.SNP.6:25707925 chr06:025707925 0 W/25707925-25707925 FN2257-S SNP C -> A AC=1;AN=190;BQB=0.888517;DP=4941;DP4=2069,2564,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000404776;MQB=1.62445e-12;MQSB=0.861652;RPB=0.892672;SGB=49.1985;VDB=0.781535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.6:25712691 chr06:025712691 0 W/25712691-25712691 FN3514-S SNP C -> T AC=2;AN=188;BQB=0.277179;DP=2761;DP4=1283,1395,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.67048e-07;MQSB=0.980262;RPB=0.539918;SGB=60.7873;VDB=0.251772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D552N|822|LOC_Os06g42770|protein_coding|CODING|LOC_Os06g42770.1|2|1) FN626-S.SNP.6:25713390 chr06:025713390 0 W/25713390-25713390 FN626-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g42770 type II intron maturase protein, putative, expressed SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN597-S.SNP.6:25714618 chr06:025714618 0 W/25714618-25714618 FN597-S Single Base Substitution C-A START_GAINED HET LOC_Os06g42770 type II intron maturase protein, putative, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN851-S.SNP.6:25723779 chr06:025723779 0 W/25723779-25723779 FN851-S Single Base Substitution C-T INTERGENIC HOMO SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2477.SNP.6:25724058 chr06:025724058 0 W/25724058-25724058 FN2477 SNP G -> A AC=2;AN=200;BQB=0.969883;DP=4897;DP4=2304,2349,22,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.88916e-29;MQSB=0.843717;RPB=0.999992;SGB=233.866;VDB=0.622577;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.6:25724966 chr06:025724966 0 W/25724966-25724966 FN-258 Single Base Substitution G-A INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN821-S.SNP.6:25725083 chr06:025725083 0 W/25725083-25725083 FN821-S Single Base Substitution C-G INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN3718-S.SNP.6:25725674 chr06:025725674 0 W/25725674-25725674 FN3718-S SNP G -> A AC=2;AN=190;BQB=0.988983;DP=3049;DP4=1519,1291,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.80629e-16;MQSB=0.984179;RPB=0.940638;SGB=19.6499;VDB=0.600206;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.6:25741428 chr06:025741428 0 W/25741428-25741428 FN4114-S SNP C -> T AC=2;AN=182;BQB=0.998713;DP=2702;DP4=1331,1252,17,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.31787e-13;MQSB=0.645658;RPB=0.71893;SGB=125.307;VDB=0.451288;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R8|451|LOC_Os06g42810|protein_coding|CODING|LOC_Os06g42810.1|1|1) FN1156-XA21.SNP.6:25741927 chr06:025741927 0 W/25741927-25741927 FN1156-XA21 Single Base Substitution T-C UTR_3_PRIME HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2191-S.SNP.6:25744001 chr06:025744001 0 W/25744001-25744001 FN2191-S SNP A -> T AC=1;AN=190;BQB=0.892856;DP=5017;DP4=2777,1817,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199322;MQB=3.69681e-13;MQSB=0.844489;RPB=0.806207;SGB=75.1932;VDB=0.705968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.6:25744566 chr06:025744566 0 W/25744566-25744566 FN1136-19-S Single Base Substitution A-G INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3867-S.SNP.6:25752239 chr06:025752239 0 W/25752239-25752239 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.865017;DP=2550;DP4=926,1540,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.20569e-06;MQSB=0.264301;RPB=0.999519;SGB=38.3284;VDB=0.282458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.6:25757164 chr06:025757164 0 W/25757164-25757164 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.716151;DP=2905;DP4=1351,1494,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.21192e-06;MQSB=0.957414;RPB=0.999151;SGB=-2.32838;VDB=0.896471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C38Y|413|LOC_Os06g42860|protein_coding|CODING|LOC_Os06g42860.1|1|1) FN1000-S.SNP.6:25758494 chr06:025758494 0 W/25758494-25758494 FN1000-S Single Base Substitution C-A INTERGENIC HOMO SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3778-S.SNP.6:25760445 chr06:025760445 0 W/25760445-25760445 FN3778-S SNP C -> A AC=1;AN=190;BQB=0.981901;DP=3081;DP4=1660,1282,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.1387e-12;MQSB=0.768623;RPB=0.97455;SGB=85.5263;VDB=0.594667;EFF=INTERGENIC(MODIFIER||||||||||1) FN625-S.SNP.6:25760982 chr06:025760982 0 W/25760982-25760982 FN625-S Single Base Substitution G-T INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2771-S.SNP.6:25764991 chr06:025764991 0 W/25764991-25764991 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.744148;DP=4168;DP4=1954,1964,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00143954;MQB=5.36168e-05;MQSB=0.916078;RPB=0.968698;SGB=24.1541;VDB=0.653244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-299.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN-299 Single Base Substitution G-A INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-387.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN-387 Single Base Substitution G-A INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-66.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN-66 Single Base Substitution G-A INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1024-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN1024-S Single Base Substitution G-A INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1089-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN1089-S Single Base Substitution G-A INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1300-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN1300-S Single Base Substitution G-A INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2339.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN2339 SNP G -> A AC=2;AN=192;BQB=0.20705;DP=5236;DP4=2606,2368,12,29;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0444996;MQB=0.175487;MQSB=0.000366998;RPB=0.999616;SGB=90.4583;VDB=0.276152;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN2456 SNP G -> A AC=2;AN=200;BQB=0.45143;DP=5100;DP4=2583,2292,10,19;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.0460784;MQB=0.0691475;MQSB=2.02315e-05;RPB=0.963431;SGB=127.947;VDB=0.422045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.973686;DP=2950;DP4=1544,1268,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0386441;MQB=0.0467218;MQSB=1.86164e-23;RPB=0.870256;SGB=82.0227;VDB=0.0495765;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN4176-S SNP G -> A AC=2;AN=170;BQB=0.237497;DP=2844;DP4=1492,1234,13,14;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0376231;MQB=0.350416;MQSB=5.88066e-23;RPB=0.540079;SGB=83.0751;VDB=0.612208;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN474-S Single Base Substitution G-A INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN768-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN768-S Single Base Substitution G-A INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN874-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN874-S Single Base Substitution G-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN949-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN949-S Single Base Substitution G-A INTERGENIC HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN975-S.SNP.6:25778143 chr06:025778143 0 W/25778143-25778143 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN815-S.SNP.6:25780536 chr06:025780536 0 W/25780536-25780536 FN815-S Single Base Substitution C-G INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN-252.SNP.6:25792907 chr06:025792907 0 W/25792907-25792907 FN-252 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g42920 hypothetical protein SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2663-S.SNP.6:25801440 chr06:025801440 0 W/25801440-25801440 FN2663-S SNP G -> A AC=1;AN=200;BQB=0.363028;DP=7517;DP4=3705,3261,8,27;HOB=5e-05;ICB=0.0001005;MQ=12;MQ0F=0.462552;MQB=2.67142e-07;MQSB=9.66802e-28;RPB=0.385437;SGB=115.978;VDB=0.148844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R349Q|510|LOC_Os06g42940|protein_coding|CODING|LOC_Os06g42940.1|1|1) W481-5-1.SNP.6:25806241 chr06:025806241 0 W/25806241-25806241 W481-5-1 Single Base Substitution C-A INTRON HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. N1-169-7.SNP.6:25816286 chr06:025816286 0 W/25816286-25816286 N1-169-7 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. FN897-S.SNP.6:25822391 chr06:025822391 0 W/25822391-25822391 FN897-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g42980 retrotransposon protein, putative, unclassified, expressed SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2219-S.SNP.6:25823030 chr06:025823030 0 W/25823030-25823030 FN2219-S SNP C -> T AC=1;AN=190;BQB=0.435692;DP=4547;DP4=1827,2493,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0961073;MQB=0.966392;MQSB=0;RPB=0.785909;SGB=44.5415;VDB=0.682947;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D510N|2004|LOC_Os06g42980|protein_coding|CODING|LOC_Os06g42980.1|2|1) FN2085-S.SNP.6:25850936 chr06:025850936 0 W/25850936-25850936 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.916643;DP=3834;DP4=1724,2054,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.94067e-13;MQSB=0.500148;RPB=0.622454;SGB=-44.6276;VDB=0.228077;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.6:25851485 chr06:025851485 0 W/25851485-25851485 FN4160-S SNP C -> A AC=1;AN=170;BQB=0.985212;DP=2717;DP4=947,1667,9,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.69677e-06;MQSB=0.978531;RPB=0.962079;SGB=43.4296;VDB=0.112797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.6:25853615 chr06:025853615 0 W/25853615-25853615 FN2444 SNP C -> T AC=2;AN=200;BQB=0.552026;DP=5187;DP4=2296,2534,31,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.54876e-36;MQSB=0.961127;RPB=0.968921;SGB=84.9329;VDB=0.102006;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.6:25857104 chr06:025857104 0 W/25857104-25857104 FN2103-S SNP C -> A AC=1;AN=168;BQB=0.997519;DP=3843;DP4=1644,2140,10,24;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.35171e-18;MQSB=0.917327;RPB=0.949116;SGB=-8.47945;VDB=0.752658;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.6:25861458 chr06:025861458 0 W/25861458-25861458 FN-147 Single Base Substitution T-C INTRON HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2658-S.SNP.6:25864775 chr06:025864775 0 W/25864775-25864775 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.96739;DP=4999;DP4=2443,2303,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.098e-18;MQSB=0.999999;RPB=0.515717;SGB=123.342;VDB=0.865831;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.6:25868329 chr06:025868329 0 W/25868329-25868329 FN3505-S SNP G -> A AC=1;AN=188;BQB=0.830128;DP=3614;DP4=1787,1732,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.01928e-11;MQSB=0.652719;RPB=0.893388;SGB=76.2387;VDB=0.273819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R6Q|398|LOC_Os06g43030|protein_coding|CODING|LOC_Os06g43030.1|1|1) FN1473-S.SNP.6:25869104 chr06:025869104 0 W/25869104-25869104 FN1473-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN1039-S.SNP.6:25869239 chr06:025869239 0 W/25869239-25869239 FN1039-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2097-S.SNP.6:25872870 chr06:025872870 0 W/25872870-25872870 FN2097-S SNP C -> T AC=1;AN=168;BQB=0.966262;DP=3999;DP4=2018,1955,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.8143e-08;MQSB=0.958447;RPB=0.640523;SGB=24.6155;VDB=0.777354;EFF=INTRON(MODIFIER||||382|LOC_Os06g43044|protein_coding|CODING|LOC_Os06g43044.1|1|1) FN3312-S.SNP.6:25878399 chr06:025878399 0 W/25878399-25878399 FN3312-S SNP T -> A AC=1;AN=184;BQB=0.943348;DP=3247;DP4=1279,1828,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.00035e-12;MQSB=0.998547;RPB=0.91944;SGB=33.3622;VDB=0.129251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.6:25879909 chr06:025879909 0 W/25879909-25879909 FN3825-S SNP G -> A AC=1;AN=190;BQB=0.995737;DP=2761;DP4=1398,1245,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.29049e-09;MQSB=0.804021;RPB=0.999483;SGB=67.3108;VDB=0.485546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.6:25904990 chr06:025904990 0 W/25904990-25904990 FN1566-S Single Base Substitution G-A INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3597-S.SNP.6:25910145 chr06:025910145 0 W/25910145-25910145 FN3597-S SNP C -> A AC=2;AN=188;BQB=0.842283;DP=4405;DP4=2053,2255,21,26;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000681044;MQB=3.029e-21;MQSB=0.81986;RPB=0.677064;SGB=207.994;VDB=0.819607;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.6:25913303 chr06:025913303 0 W/25913303-25913303 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.479907;DP=4823;DP4=2417,2145,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.23748e-13;MQSB=0.964992;RPB=0.963756;SGB=86.5007;VDB=0.337235;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.6:25913937 chr06:025913937 0 W/25913937-25913937 FN739-S Single Base Substitution G-T INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN_770-6-1.SNP.6:25917208 chr06:025917208 0 W/25917208-25917208 FN_770-6-1 Single Base Substitution G-A HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN3677-S.SNP.6:25923385 chr06:025923385 0 W/25923385-25923385 FN3677-S SNP A -> G AC=1;AN=190;BQB=0.290056;DP=3022;DP4=1507,1428,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.79748e-07;MQSB=0.895256;RPB=0.801271;SGB=46.7622;VDB=0.119443;EFF=INTRON(MODIFIER||||1890|LOC_Os06g43120|protein_coding|CODING|LOC_Os06g43120.1|1|1),INTRON(MODIFIER||||1754|LOC_Os06g43120|protein_coding|CODING|LOC_Os06g43120.2|1|1) FN2083-S.SNP.6:25923955 chr06:025923955 0 W/25923955-25923955 FN2083-S SNP C -> G AC=1;AN=168;BQB=0.705079;DP=4186;DP4=1799,2270,63,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.771155;RPB=0.253348;SGB=-1295.9;VDB=0.0715049;EFF=INTRON(MODIFIER||||1890|LOC_Os06g43120|protein_coding|CODING|LOC_Os06g43120.1|1|1),INTRON(MODIFIER||||1754|LOC_Os06g43120|protein_coding|CODING|LOC_Os06g43120.2|1|1) FN708-S.SNP.6:25933901 chr06:025933901 0 W/25933901-25933901 FN708-S Single Base Substitution T-A INTRON HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4073-S.SNP.6:25936719 chr06:025936719 0 W/25936719-25936719 FN4073-S SNP C -> A AC=1;AN=182;BQB=0.960329;DP=2867;DP4=1521,1260,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.90331e-05;MQSB=0.9742;RPB=0.505446;SGB=35.0899;VDB=0.2098;EFF=INTRON(MODIFIER||||1339|LOC_Os06g43150|protein_coding|CODING|LOC_Os06g43150.1|1|1) FN584-S.SNP.6:25949694 chr06:025949694 0 W/25949694-25949694 FN584-S Single Base Substitution A-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2123-S.SNP.6:25954392 chr06:025954392 0 W/25954392-25954392 FN2123-S SNP C -> T AC=1;AN=168;BQB=0.439987;DP=3982;DP4=1944,1976,20,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.48684e-17;MQSB=0.994389;RPB=0.819877;SGB=-96.3134;VDB=0.803762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.6:25954822 chr06:025954822 0 W/25954822-25954822 FN2123-S SNP G -> T AC=1;AN=168;BQB=0.194798;DP=3626;DP4=1833,1738,18,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.71442e-12;MQSB=0.954614;RPB=0.692965;SGB=-121.185;VDB=0.290062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.6:25958241 chr06:025958241 0 W/25958241-25958241 FN1763-S SNP A -> G AC=1;AN=188;BQB=0.138064;DP=3951;DP4=2006,1905,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.60796e-08;MQSB=0.972888;RPB=0.987275;SGB=-91.3539;VDB=0.506378;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.6:25967924 chr06:025967924 0 W/25967924-25967924 FN911-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN911-S.SNP.6:25967925 chr06:025967925 0 W/25967925-25967925 FN911-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3298-S.SNP.6:25969337 chr06:025969337 0 W/25969337-25969337 FN3298-S SNP A -> G AC=1;AN=184;BQB=0.994688;DP=2764;DP4=1444,1216,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36991e-07;MQSB=0.895095;RPB=0.693283;SGB=53.2642;VDB=0.909255;EFF=INTRON(MODIFIER||||1088|LOC_Os06g43210|protein_coding|CODING|LOC_Os06g43210.1|7|1) FN1438-S.SNP.6:25987942 chr06:025987942 0 W/25987942-25987942 FN1438-S Single Base Substitution A-T INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1438-S.SNP.6:25987943 chr06:025987943 0 W/25987943-25987943 FN1438-S Single Base Substitution T-C INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4114-S.SNP.6:25993966 chr06:025993966 0 W/25993966-25993966 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.867787;DP=2751;DP4=1618,994,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.63324e-07;MQSB=0.186234;RPB=0.747977;SGB=15.6115;VDB=0.804268;EFF=INTRON(MODIFIER||||94|LOC_Os06g43260|protein_coding|CODING|LOC_Os06g43260.1|2|1) FN1537-S.SNP.6:25994070 chr06:025994070 0 W/25994070-25994070 FN1537-S Single Base Substitution A-G INTRON HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN-103.SNP.6:25995679 chr06:025995679 0 W/25995679-25995679 FN-103 Single Base Substitution T-C INTRON HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN354-S.SNP.6:25997931 chr06:025997931 0 W/25997931-25997931 FN354-S Single Base Substitution G-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN1652-S.SNP.6:25999647 chr06:025999647 0 W/25999647-25999647 FN1652-S Single Base Substitution T-G INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN4069-S.SNP.6:26002695 chr06:026002695 0 W/26002695-26002695 FN4069-S SNP A -> T AC=1;AN=182;BQB=0.606525;DP=2889;DP4=1184,1557,14,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.5429e-11;MQSB=0.290496;RPB=0.925539;SGB=50.7635;VDB=0.52746;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.6:26011967 chr06:026011967 0 W/26011967-26011967 FN725-S Single Base Substitution A-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN3803-S.SNP.6:26014064 chr06:026014064 0 W/26014064-26014064 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.679833;DP=2605;DP4=1410,1095,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0111324;MQB=2.77601e-06;MQSB=0.87662;RPB=0.81911;SGB=60.9777;VDB=0.262812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G455R|1236|LOC_Os06g43290|protein_coding|CODING|LOC_Os06g43290.1|1|1) FN2324.SNP.6:26020815 chr06:026020815 0 W/26020815-26020815 FN2324 SNP T -> A AC=1;AN=192;BQB=0.430656;DP=5112;DP4=2401,2431,9,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.27845e-17;MQSB=0.994846;RPB=0.0181253;SGB=122.24;VDB=0.29283;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.6:26029429 chr06:026029429 0 W/26029429-26029429 FN3294-S SNP C -> T AC=2;AN=184;BQB=0.482851;DP=2125;DP4=753,1293,8,15;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=2.09547e-09;MQSB=0.00549874;RPB=0.72468;SGB=98.4821;VDB=0.427782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.6:26030455 chr06:026030455 0 W/26030455-26030455 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.988589;DP=2675;DP4=1071,1354,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66243e-07;MQSB=0.822139;RPB=0.849357;SGB=35.7479;VDB=0.962315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.6:26036344 chr06:026036344 0 W/26036344-26036344 FN3784-S SNP C -> A AC=2;AN=190;BQB=0.982042;DP=2296;DP4=1144,998,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4643e-10;MQSB=0.777157;RPB=0.888212;SGB=80.9724;VDB=0.734212;EFF=INTRON(MODIFIER||||526|LOC_Os06g43320|protein_coding|CODING|LOC_Os06g43320.1|1|1) FN959-S.SNP.6:26041573 chr06:026041573 0 W/26041573-26041573 FN959-S Single Base Substitution C-T INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN3452-S.SNP.6:26049988 chr06:026049988 0 W/26049988-26049988 FN3452-S SNP G -> A AC=2;AN=184;BQB=0.645812;DP=3209;DP4=1496,1587,7,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000311624;MQB=5.36236e-08;MQSB=0.475292;RPB=0.690718;SGB=89.4385;VDB=0.394621;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L407|701|LOC_Os06g43330|protein_coding|CODING|LOC_Os06g43330.1|5|1) FN3867-S.SNP.6:26050810 chr06:026050810 0 W/26050810-26050810 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.997216;DP=2609;DP4=1380,1158,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000766577;MQB=1.09893e-07;MQSB=0.998795;RPB=0.343062;SGB=47.0672;VDB=0.345999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A606T|701|LOC_Os06g43330|protein_coding|CODING|LOC_Os06g43330.1|7|1) FN1540-S.SNP.6:26052870 chr06:026052870 0 W/26052870-26052870 FN1540-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g43340 retrotransposon protein, putative, unclassified, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN360-S.SNP.6:26059377 chr06:026059377 0 W/26059377-26059377 FN360-S Single Base Substitution G-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1547-S.SNP.6:26059527 chr06:026059527 0 W/26059527-26059527 FN1547-S Single Base Substitution A-C INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN888-S.SNP.6:26060753 chr06:026060753 0 W/26060753-26060753 FN888-S Single Base Substitution T-C INTERGENIC HOMO SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1521-S.SNP.6:26062501 chr06:026062501 0 W/26062501-26062501 FN1521-S Single Base Substitution G-A INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN4235-S.SNP.6:26064169 chr06:026064169 0 W/26064169-26064169 FN4235-S SNP A -> T AC=2;AN=170;BQB=0.360986;DP=1905;DP4=992,806,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.99554e-11;MQSB=0.970874;RPB=0.830989;SGB=44.3104;VDB=0.997973;EFF=INTRON(MODIFIER||||518|LOC_Os06g43350|protein_coding|CODING|LOC_Os06g43350.1|1|1) FN1025-S.SNP.6:26068604 chr06:026068604 0 W/26068604-26068604 FN1025-S Single Base Substitution T-C INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN_822-5-1.SNP.6:26074350 chr06:026074350 0 W/26074350-26074350 FN_822-5-1 Single Base Substitution A-G HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3840-S.SNP.6:26074492 chr06:026074492 0 W/26074492-26074492 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.960421;DP=2556;DP4=1134,1312,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70792e-05;MQSB=0.742947;RPB=0.932759;SGB=39.9877;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.6:26078952 chr06:026078952 0 W/26078952-26078952 FN424-S Single Base Substitution G-T INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN_777-2-1.SNP.6:26096472 chr06:026096472 0 W/26096472-26096472 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2437.SNP.6:26103815 chr06:026103815 0 W/26103815-26103815 FN2437 SNP C -> A AC=1;AN=200;BQB=0.766505;DP=4305;DP4=2207,1828,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15423e-07;MQSB=0.935389;RPB=0.685306;SGB=45.0543;VDB=0.823545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.6:26108834 chr06:026108834 0 W/26108834-26108834 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.703629;DP=3427;DP4=1585,1795,15,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.27546e-14;MQSB=0.879921;RPB=0.995754;SGB=-80.6216;VDB=0.144556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G151E|219|LOC_Os06g43440|protein_coding|CODING|LOC_Os06g43440.1|2|1) FN3514-S.SNP.6:26109660 chr06:026109660 0 W/26109660-26109660 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.909284;DP=3355;DP4=1585,1662,14,15;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0703428;MQB=0.386352;MQSB=1.45827e-19;RPB=0.968354;SGB=126.215;VDB=0.222886;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.6:26119595 chr06:026119595 0 W/26119595-26119595 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.901216;DP=2559;DP4=1233,1260,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=32;MQ0F=0.0296991;MQB=0.99879;MQSB=0.976064;RPB=0.484625;SGB=47.8722;VDB=0.762846;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I535|1954|LOC_Os06g43460|protein_coding|CODING|LOC_Os06g43460.1|1|1) FN3927-S.SNP.6:26135465 chr06:026135465 0 W/26135465-26135465 FN3927-S SNP T -> A AC=2;AN=158;BQB=0.967388;DP=2651;DP4=1250,1287,24,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.49506e-21;MQSB=0.888726;RPB=0.758415;SGB=165.042;VDB=0.124763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.6:26140621 chr06:026140621 0 W/26140621-26140621 FN3362-S SNP A -> T AC=1;AN=184;BQB=0.875692;DP=3056;DP4=1600,1357,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98626e-11;MQSB=0.926867;RPB=0.700422;SGB=75.8731;VDB=0.304387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.6:26140696 chr06:026140696 0 W/26140696-26140696 FN3853-S SNP A -> G AC=1;AN=158;BQB=0.997966;DP=2403;DP4=1241,1043,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.58997e-05;MQSB=0.808182;RPB=0.192768;SGB=20.5959;VDB=0.2421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.6:26140723 chr06:026140723 0 W/26140723-26140723 FN1283-S Single Base Substitution G-A INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2583-S.SNP.6:26150573 chr06:026150573 0 W/26150573-26150573 FN2583-S SNP C -> A AC=1;AN=200;BQB=0.612282;DP=4960;DP4=2307,2353,8,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.54168e-08;MQSB=0.0557328;RPB=0.999223;SGB=54.2646;VDB=0.142512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.6:26150574 chr06:026150574 0 W/26150574-26150574 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.370643;DP=4942;DP4=2197,2395,8,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.07619e-09;MQSB=0.0760275;RPB=0.887342;SGB=40.2696;VDB=0.164817;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.6:26151149 chr06:026151149 0 W/26151149-26151149 FN1619-S Single Base Substitution C-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-336.SNP.6:26165132 chr06:026165132 0 W/26165132-26165132 FN-336 Single Base Substitution T-C INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN838-S.SNP.6:26170414 chr06:026170414 0 W/26170414-26170414 FN838-S Single Base Substitution A-G INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2113-S.SNP.6:26173799 chr06:026173799 0 W/26173799-26173799 FN2113-S SNP A -> T AC=2;AN=168;BQB=0.677175;DP=2458;DP4=1136,1262,15,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.91105e-11;MQSB=0.97702;RPB=0.671644;SGB=44.0621;VDB=0.80114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.6:26176229 chr06:026176229 0 W/26176229-26176229 FN2529-S SNP C -> A AC=1;AN=198;BQB=0.0550871;DP=4918;DP4=2830,1836,14,17;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.051037;MQB=0.933695;MQSB=0;RPB=0.982892;SGB=-41.0942;VDB=0.0446141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.6:26208658 chr06:026208658 0 W/26208658-26208658 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.988964;DP=5348;DP4=2389,2460,10,4;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.19166;MQB=0.262372;MQSB=9.52883e-44;RPB=0.595907;SGB=58.8698;VDB=0.712113;EFF=INTRON(MODIFIER||||230|LOC_Os06g43580|protein_coding|CODING|LOC_Os06g43580.1|1|1) FN486-S.SNP.6:26209172 chr06:026209172 0 W/26209172-26209172 FN486-S Single Base Substitution G-T SPLICE_SITE_ACCEPTOR HET LOC_Os06g43580 expressed protein SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN-197.SNP.6:26212512 chr06:026212512 0 W/26212512-26212512 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-134.SNP.6:26220431 chr06:026220431 0 W/26220431-26220431 FN-134 Single Base Substitution T-C INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN4148-S.SNP.6:26226859 chr06:026226859 0 W/26226859-26226859 FN4148-S SNP C -> T AC=1;AN=170;BQB=0.999457;DP=1748;DP4=609,1038,4,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.87463e-08;MQSB=0.299341;RPB=0.985749;SGB=41.7633;VDB=0.564511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.6:26227408 chr06:026227408 0 W/26227408-26227408 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.930685;DP=2537;DP4=1622,651,15,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.93187e-09;MQSB=0.453122;RPB=0.807625;SGB=71.6954;VDB=0.254923;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P70|255|LOC_Os06g43600|protein_coding|CODING|LOC_Os06g43600.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P70|255|LOC_Os06g43600|protein_coding|CODING|LOC_Os06g43600.2|1|1) FN1545-S.SNP.6:26228824 chr06:026228824 0 W/26228824-26228824 FN1545-S Single Base Substitution T-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1202-S.SNP.6:26234669 chr06:026234669 0 W/26234669-26234669 FN1202-S Single Base Substitution A-G INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN630-S.SNP.6:26234964 chr06:026234964 0 W/26234964-26234964 FN630-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN-104.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN-104 Single Base Substitution A-G INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-78.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN-78 Single Base Substitution A-G INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1501-S.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN1501-S Single Base Substitution A-G INTERGENIC Homo SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2165-S.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN2165-S SNP A -> G AC=1;AN=168;BQB=0.000149137;DP=3926;DP4=2309,1558,19,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.97556e-08;MQSB=0.855735;RPB=0.992392;SGB=-323.447;VDB=0.832263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2459.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN2459 SNP A -> G AC=1;AN=200;BQB=0.967915;DP=4436;DP4=2466,1665,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58703e-15;MQSB=0.999972;RPB=0.890303;SGB=27.1468;VDB=0.665115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN3372-S SNP A -> G AC=2;AN=184;BQB=0.344761;DP=3245;DP4=1575,1483,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.03018e-13;MQSB=0.976212;RPB=0.965473;SGB=-10.0179;VDB=0.315829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN3549-S SNP A -> G AC=1;AN=188;BQB=0.226895;DP=3337;DP4=1561,1647,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000406502;MQSB=0.6368;RPB=0.608633;SGB=-2.17824;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.6:26238325 chr06:026238325 0 W/26238325-26238325 FN872-S Single Base Substitution A-G INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN471-S.SNP.6:26240228 chr06:026240228 0 W/26240228-26240228 FN471-S Single Base Substitution G-A INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3946-S.SNP.6:26250339 chr06:026250339 0 W/26250339-26250339 FN3946-S SNP C -> G AC=1;AN=168;BQB=0.960716;DP=1336;DP4=597,631,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74626e-05;MQSB=0.216002;RPB=0.314961;SGB=31.3172;VDB=0.200231;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.6:26253237 chr06:026253237 0 W/26253237-26253237 FN821-S Single Base Substitution T-A INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN1129-S.SNP.6:26262132 chr06:026262132 0 W/26262132-26262132 FN1129-S Single Base Substitution C-A INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1324-S.SNP.6:26269567 chr06:026269567 0 W/26269567-26269567 FN1324-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN4235-S.SNP.6:26279275 chr06:026279275 0 W/26279275-26279275 FN4235-S SNP A -> G AC=2;AN=170;BQB=0.998364;DP=2424;DP4=1086,1236,8,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.76489e-09;MQSB=0.423871;RPB=0.936029;SGB=65.6427;VDB=0.923849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.6:26285946 chr06:026285946 0 W/26285946-26285946 FN2608-S SNP G -> C AC=1;AN=198;BQB=0.932553;DP=4190;DP4=2054,1956,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.45505e-08;MQSB=0.91706;RPB=0.688606;SGB=32.9588;VDB=0.642502;EFF=INTRON(MODIFIER||||2225|LOC_Os06g43670|protein_coding|CODING|LOC_Os06g43670.1|5|1) FN734-S.SNP.6:26295834 chr06:026295834 0 W/26295834-26295834 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3472-S.SNP.6:26297662 chr06:026297662 0 W/26297662-26297662 FN3472-S SNP T -> C AC=1;AN=184;BQB=0.874776;DP=2771;DP4=1263,1387,15,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87112e-14;MQSB=0.95795;RPB=0.990029;SGB=58.5801;VDB=0.718439;EFF=INTRON(MODIFIER||||649|LOC_Os06g43680|protein_coding|CODING|LOC_Os06g43680.1|1|1) FN1703-S.SNP.6:26320541 chr06:026320541 0 W/26320541-26320541 FN1703-S SNP G -> A AC=2;AN=188;BQB=0.0213468;DP=2720;DP4=1385,1299,16,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.99561e-09;MQSB=0.980911;RPB=0.371787;SGB=19.4279;VDB=0.800564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.6:26320985 chr06:026320985 0 W/26320985-26320985 FN3518-S SNP C -> T AC=1;AN=188;BQB=0.941494;DP=3280;DP4=1557,1649,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.79697e-13;MQSB=0.983019;RPB=0.997993;SGB=103.498;VDB=0.838208;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.6:26326080 chr06:026326080 0 W/26326080-26326080 FN1565-S Single Base Substitution A-G INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN713-S.SNP.6:26338811 chr06:026338811 0 W/26338811-26338811 FN713-S Single Base Substitution A-G INTRON HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2482.SNP.6:26339403 chr06:026339403 0 W/26339403-26339403 FN2482 SNP T -> A AC=1;AN=200;BQB=0.469052;DP=4621;DP4=2352,2097,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.94237e-09;MQSB=0.735014;RPB=0.876458;SGB=58.8698;VDB=0.220083;EFF=INTRON(MODIFIER||||1157|LOC_Os06g43760|protein_coding|CODING|LOC_Os06g43760.1|10|1) FN3679-S.SNP.6:26354404 chr06:026354404 0 W/26354404-26354404 FN3679-S SNP G -> A AC=2;AN=190;BQB=0.175264;DP=2898;DP4=1401,1321,25,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.03017e-17;MQSB=0.982043;RPB=0.987624;SGB=-0.482811;VDB=0.753945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.6:26357036 chr06:026357036 0 W/26357036-26357036 FN1287-S Single Base Substitution T-A INTRON HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2734-S.SNP.6:26364361 chr06:026364361 0 W/26364361-26364361 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.398963;DP=4834;DP4=2103,2488,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48648e-07;MQSB=0.918209;RPB=0.958395;SGB=4.67442;VDB=0.530462;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G1056|1824|LOC_Os06g43790|protein_coding|CODING|LOC_Os06g43790.1|16|1) FN3322-S.SNP.6:26367639 chr06:026367639 0 W/26367639-26367639 FN3322-S SNP A -> G AC=1;AN=184;BQB=0.920173;DP=3184;DP4=1309,1665,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33715e-05;MQSB=0.8435;RPB=0.860616;SGB=18.1394;VDB=0.22253;EFF=INTRON(MODIFIER||||1824|LOC_Os06g43790|protein_coding|CODING|LOC_Os06g43790.1|10|1) FN-400.SNP.6:26379269 chr06:026379269 0 W/26379269-26379269 FN-400 Single Base Substitution T-A INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2638-S.SNP.6:26381132 chr06:026381132 0 W/26381132-26381132 FN2638-S SNP C -> G AC=1;AN=200;BQB=0.975032;DP=3797;DP4=2317,1154,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62707e-09;MQSB=5.91177e-07;RPB=0.603854;SGB=47.4799;VDB=0.95802;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.6:26383494 chr06:026383494 0 W/26383494-26383494 CW-631-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1763-S.SNP.6:26384770 chr06:026384770 0 W/26384770-26384770 FN1763-S SNP C -> T AC=1;AN=188;BQB=0.000154782;DP=3054;DP4=1390,1614,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06217e-07;MQSB=0.977226;RPB=0.999697;SGB=-72.0994;VDB=0.6961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.6:26391046 chr06:026391046 0 W/26391046-26391046 FN1448-S Single Base Substitution C-T INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN447-S.SNP.6:26397441 chr06:026397441 0 W/26397441-26397441 FN447-S Single Base Substitution T-A INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2348.SNP.6:26402368 chr06:026402368 0 W/26402368-26402368 FN2348 SNP G -> T AC=1;AN=192;BQB=0.498721;DP=4994;DP4=2538,2150,11,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.50555e-15;MQSB=0.922664;RPB=0.287207;SGB=-151.976;VDB=0.202261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D837Y|1112|LOC_Os06g43840|protein_coding|CODING|LOC_Os06g43840.1|4|1) FN1330-S.SNP.6:26405399 chr06:026405399 0 W/26405399-26405399 FN1330-S Single Base Substitution G-A INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2247-S.SNP.6:26410406 chr06:026410406 0 W/26410406-26410406 FN2247-S SNP A -> T AC=1;AN=190;BQB=0.974189;DP=5173;DP4=2476,2354,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193311;MQB=1.51734e-09;MQSB=0.938952;RPB=0.364966;SGB=31.3213;VDB=0.966698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E184V|225|LOC_Os06g43850|protein_coding|CODING|LOC_Os06g43850.1|5|1) FN2247-S.SNP.6:26410407 chr06:026410407 0 W/26410407-26410407 FN2247-S SNP A -> T AC=1;AN=190;BQB=0.901987;DP=5168;DP4=2497,2340,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193498;MQB=1.05879e-10;MQSB=0.906637;RPB=0.056999;SGB=-12.6681;VDB=0.594667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E184D|225|LOC_Os06g43850|protein_coding|CODING|LOC_Os06g43850.1|5|1) 701-3.SNP.6:26417138 chr06:026417138 0 W/26417138-26417138 701-3 Single Base Substitution C-T INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN1471-S.SNP.6:26421991 chr06:026421991 0 W/26421991-26421991 FN1471-S SNP C -> T AC=2;AN=188;BQB=0.712682;DP=2939;DP4=1484,1398,23,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.4069e-21;MQSB=0.964832;RPB=0.377467;SGB=-1.96068;VDB=0.362924;EFF=UTR_3_PRIME(MODIFIER||2||268|LOC_Os06g43870|protein_coding|CODING|LOC_Os06g43870.2|5|1) FN3804-S.SNP.6:26422288 chr06:026422288 0 W/26422288-26422288 FN3804-S SNP A -> T AC=1;AN=190;BQB=0.926845;DP=3236;DP4=1551,1441,21,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88368e-17;MQSB=0.985802;RPB=0.606545;SGB=-148.77;VDB=0.0036761;EFF=INTRON(MODIFIER||||268|LOC_Os06g43870|protein_coding|CODING|LOC_Os06g43870.2|4|1) FN2469.SNP.6:26429900 chr06:026429900 0 W/26429900-26429900 FN2469 SNP T -> A AC=2;AN=200;BQB=0.729232;DP=4636;DP4=2148,2290,19,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.05142e-26;MQSB=0.999553;RPB=0.895151;SGB=2.62419;VDB=0.0439401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.6:26439283 chr06:026439283 0 W/26439283-26439283 FN3288-S SNP C -> T AC=1;AN=184;BQB=0.829261;DP=3170;DP4=1357,1717,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.51057e-06;MQSB=0.997824;RPB=0.9855;SGB=48.7425;VDB=0.295418;EFF=UTR_5_PRIME(MODIFIER||186||404|LOC_Os06g43880|protein_coding|CODING|LOC_Os06g43880.1|1|1) FN2554-S.SNP.6:26446239 chr06:026446239 0 W/26446239-26446239 FN2554-S SNP A -> T AC=1;AN=198;BQB=0.59089;DP=4093;DP4=1910,1999,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.2793e-05;MQSB=0.843616;RPB=0.418712;SGB=13.7737;VDB=0.54266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.6:26446900 chr06:026446900 0 W/26446900-26446900 FN1509-S Single Base Substitution T-A INTERGENIC Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2482.SNP.6:26447215 chr06:026447215 0 W/26447215-26447215 FN2482 SNP T -> A AC=1;AN=200;BQB=0.993302;DP=4594;DP4=2103,2173,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27675e-11;MQSB=0.813332;RPB=0.550999;SGB=54.6902;VDB=0.237046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.6:26449387 chr06:026449387 0 W/26449387-26449387 FN3377-S SNP T -> C AC=1;AN=184;BQB=0.841276;DP=2739;DP4=1339,1326,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000811606;MQSB=0.993008;RPB=0.936816;SGB=26.1347;VDB=0.42503;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.6:26466940 chr06:026466940 0 W/26466940-26466940 FN768-S Single Base Substitution G-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2701-S.SNP.6:26467561 chr06:026467561 0 W/26467561-26467561 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.310724;DP=5104;DP4=2621,2265,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.04515e-11;MQSB=0.921547;RPB=0.443357;SGB=72.6852;VDB=0.0184179;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.6:26469474 chr06:026469474 0 W/26469474-26469474 FN903-S Single Base Substitution G-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN706-S.SNP.6:26480459 chr06:026480459 0 W/26480459-26480459 FN706-S Single Base Substitution G-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2656-S.SNP.6:26487539 chr06:026487539 0 W/26487539-26487539 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.923823;DP=4970;DP4=2379,2364,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.62816e-18;MQSB=0.960234;RPB=0.812004;SGB=87.1368;VDB=0.0382075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.6:26487542 chr06:026487542 0 W/26487542-26487542 FN2656-S SNP A -> T AC=1;AN=200;BQB=0.86376;DP=4953;DP4=2327,2362,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21439e-18;MQSB=0.939055;RPB=0.674795;SGB=58.1418;VDB=0.0656723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.6:26492006 chr06:026492006 0 W/26492006-26492006 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.907333;DP=4971;DP4=2373,2305,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201167;MQB=2.75717e-08;MQSB=0.998119;RPB=0.771154;SGB=43.2083;VDB=0.474291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S105F|303|LOC_Os06g43980|protein_coding|CODING|LOC_Os06g43980.1|2|1) FN2146-S.SNP.6:26499374 chr06:026499374 0 W/26499374-26499374 FN2146-S SNP C -> G AC=1;AN=168;BQB=0.312162;DP=1986;DP4=644,1299,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4237e-07;MQSB=0.581419;RPB=0.397711;SGB=45.0404;VDB=0.90666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.6:26500535 chr06:026500535 0 W/26500535-26500535 FN2592-S SNP C -> A AC=1;AN=198;BQB=0.724234;DP=4021;DP4=2020,1771,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.83426e-10;MQSB=0.949893;RPB=0.972139;SGB=81.7147;VDB=0.149919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.6:26501757 chr06:026501757 0 W/26501757-26501757 FN1660-S Single Base Substitution A-G INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1065-S.SNP.6:26502095 chr06:026502095 0 W/26502095-26502095 FN1065-S Single Base Substitution C-T INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2529-S.SNP.6:26514448 chr06:026514448 0 W/26514448-26514448 FN2529-S SNP G -> C AC=1;AN=198;BQB=0.999453;DP=4146;DP4=2069,1916,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.21068e-07;MQSB=0.896785;RPB=0.419664;SGB=49.5489;VDB=0.694975;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.6:26518434 chr06:026518434 0 W/26518434-26518434 FN-370 Single Base Substitution A-G INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3903-S.SNP.6:26519640 chr06:026519640 0 W/26519640-26519640 FN3903-S SNP C -> G AC=2;AN=158;BQB=0.946798;DP=2229;DP4=1076,1027,16,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.41777e-20;MQSB=0.805204;RPB=0.45449;SGB=71.2076;VDB=0.177115;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.6:26519640 chr06:026519640 0 W/26519640-26519640 FN779-S Single Base Substitution C-G INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN266-S.SNP.6:26522345 chr06:026522345 0 W/26522345-26522345 FN266-S Single Base Substitution T-C INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1448-S.SNP.6:26524001 chr06:026524001 0 W/26524001-26524001 FN1448-S Single Base Substitution C-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2123-S.SNP.6:26534412 chr06:026534412 0 W/26534412-26534412 FN2123-S SNP T -> A AC=1;AN=168;BQB=0.911936;DP=4256;DP4=2246,1950,22,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.18326e-19;MQSB=0.99977;RPB=0.988549;SGB=-6.75618;VDB=0.781359;EFF=INTRON(MODIFIER||||666|LOC_Os06g44030|protein_coding|CODING|LOC_Os06g44030.1|12|1),INTRON(MODIFIER||||654|LOC_Os06g44030|protein_coding|CODING|LOC_Os06g44030.2|12|1) FN4180-S.SNP.6:26554735 chr06:026554735 0 W/26554735-26554735 FN4180-S SNP C -> T AC=1;AN=170;BQB=0.98824;DP=2467;DP4=1198,1158,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.2117e-05;MQSB=0.832774;RPB=0.993078;SGB=21.1076;VDB=0.868432;EFF=UTR_5_PRIME(MODIFIER||394||58|LOC_Os06g44034|protein_coding|CODING|LOC_Os06g44034.1|1|1) FN2579-S.SNP.6:26566901 chr06:026566901 0 W/26566901-26566901 FN2579-S SNP G -> C AC=2;AN=198;BQB=0.902154;DP=4375;DP4=2097,2003,24,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000228571;MQB=9.60395e-25;MQSB=0.940114;RPB=0.625394;SGB=169.573;VDB=0.761206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.6:26568781 chr06:026568781 0 W/26568781-26568781 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.995257;DP=2641;DP4=1249,1209,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.94726e-13;MQSB=0.623576;RPB=0.975198;SGB=38.983;VDB=0.750081;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.6:26569036 chr06:026569036 0 W/26569036-26569036 FN2166-S SNP A -> G AC=2;AN=168;BQB=0.0181964;DP=3988;DP4=1955,1961,34,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.01065e-20;MQSB=0.795075;RPB=0.998918;SGB=-0.293931;VDB=0.269784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.6:26578081 chr06:026578081 0 W/26578081-26578081 FN2321 SNP T -> A AC=1;AN=192;BQB=0.958759;DP=5515;DP4=2646,2584,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.07421e-11;MQSB=0.674156;RPB=0.998974;SGB=61.1661;VDB=0.472095;EFF=INTRON(MODIFIER||||512|LOC_Os06g44060|protein_coding|CODING|LOC_Os06g44060.1|3|1),INTRON(MODIFIER||||512|LOC_Os06g44060|protein_coding|CODING|LOC_Os06g44060.2|3|1) FN1470-S.SNP.6:26579328 chr06:026579328 0 W/26579328-26579328 FN1470-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.6:26579329 chr06:026579329 0 W/26579329-26579329 FN1470-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g44060 phospholipase D. Active site motif family protein, expressed SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2129-S.SNP.6:26581751 chr06:026581751 0 W/26581751-26581751 FN2129-S SNP C -> G AC=1;AN=168;BQB=0.00604546;DP=1998;DP4=902,1006,17,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000754296;MQSB=0.75476;RPB=0.728374;SGB=-100.631;VDB=0.0636074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S17C|420|LOC_Os06g44070|protein_coding|CODING|LOC_Os06g44070.1|1|1) FN1003-S.SNP.6:26582824 chr06:026582824 0 W/26582824-26582824 FN1003-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g44070 retrotransposon protein, putative, unclassified, expressed SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1496-S.SNP.6:26582877 chr06:026582877 0 W/26582877-26582877 FN1496-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2753-S.SNP.6:26588652 chr06:026588652 0 W/26588652-26588652 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.984605;DP=4613;DP4=2144,2309,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42324e-13;MQSB=0.89771;RPB=0.799236;SGB=-8.87404;VDB=0.82367;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.6:26600582 chr06:026600582 0 W/26600582-26600582 FN1075-S Single Base Substitution T-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3456-S.SNP.6:26614641 chr06:026614641 0 W/26614641-26614641 FN3456-S SNP G -> C AC=1;AN=184;BQB=0.944795;DP=2700;DP4=1456,1167,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2957e-05;MQSB=0.991923;RPB=0.835084;SGB=30.6558;VDB=0.316575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.6:26621253 chr06:026621253 0 W/26621253-26621253 FN3364-S SNP G -> A AC=1;AN=184;BQB=0.504864;DP=2157;DP4=888,1104,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.0164873;MQSB=2.01988e-22;RPB=0.817921;SGB=21.6609;VDB=0.938745;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.6:26626983 chr06:026626983 0 W/26626983-26626983 FN4100-S SNP G -> A AC=1;AN=182;BQB=0.0715284;DP=2566;DP4=1272,1194,16,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.12762e-09;MQSB=0.965663;RPB=0.226675;SGB=74.2472;VDB=0.631784;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.6:26629722 chr06:026629722 0 W/26629722-26629722 FN584-S Single Base Substitution C-A INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN4258-S.SNP.6:26640686 chr06:026640686 0 W/26640686-26640686 FN4258-S SNP G -> A AC=2;AN=170;BQB=0.709982;DP=1931;DP4=758,1090,5,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.08213e-11;MQSB=0.0679562;RPB=0.988409;SGB=78.9707;VDB=0.383486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.6:26641583 chr06:026641583 0 W/26641583-26641583 FN2471 SNP C -> T AC=2;AN=200;BQB=0.891651;DP=4849;DP4=2235,2237,37,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000206228;MQB=2.10432e-39;MQSB=0.863802;RPB=0.266352;SGB=-55.0571;VDB=0.021941;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.6:26658106 chr06:026658106 0 W/26658106-26658106 FN939-S Single Base Substitution T-A INTRON HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2152-S.SNP.6:26660957 chr06:026660957 0 W/26660957-26660957 FN2152-S SNP A -> G AC=1;AN=168;BQB=0.176402;DP=3689;DP4=1769,1882,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03543e-10;MQSB=0.995422;RPB=0.412904;SGB=-41.2125;VDB=0.543918;EFF=UTR_3_PRIME(MODIFIER||641||489|LOC_Os06g44200|protein_coding|CODING|LOC_Os06g44200.1|3|1),UTR_3_PRIME(MODIFIER||641||482|LOC_Os06g44200|protein_coding|CODING|LOC_Os06g44200.2|3|1),UTR_3_PRIME(MODIFIER||641||460|LOC_Os06g44200|protein_coding|CODING|LOC_Os06g44200.3|2|1) FN1057-S.SNP.6:26664853 chr06:026664853 0 W/26664853-26664853 FN1057-S Single Base Substitution G-T INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN898-S.SNP.6:26679273 chr06:026679273 0 W/26679273-26679273 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN701-S.SNP.6:26682959 chr06:026682959 0 W/26682959-26682959 FN701-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g44230 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN4002-S.SNP.6:26695888 chr06:026695888 0 W/26695888-26695888 FN4002-S SNP C -> T AC=1;AN=168;BQB=0.868351;DP=1700;DP4=729,872,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00252531;MQSB=0.154307;RPB=0.950103;SGB=21.0249;VDB=0.228571;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G144|389|LOC_Os06g44250|protein_coding|CODING|LOC_Os06g44250.1|2|1) FN3443-S.SNP.6:26696384 chr06:026696384 0 W/26696384-26696384 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.0627074;DP=2301;DP4=998,703,18,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44556e-13;MQSB=0.977985;RPB=0.634155;SGB=-269.338;VDB=0.785116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V17A|389|LOC_Os06g44250|protein_coding|CODING|LOC_Os06g44250.1|1|1) FN511-S.SNP.6:26697173 chr06:026697173 0 W/26697173-26697173 FN511-S Single Base Substitution T-C INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3886-S.SNP.6:26700200 chr06:026700200 0 W/26700200-26700200 FN3886-S SNP T -> A AC=1;AN=158;BQB=0.993435;DP=2858;DP4=1440,1285,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.61732e-08;MQSB=0.604815;RPB=0.759826;SGB=30.704;VDB=0.419124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.6:26701518 chr06:026701518 0 W/26701518-26701518 FN2489 SNP A -> T AC=1;AN=200;BQB=0.988422;DP=5408;DP4=2663,2465,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.72089e-12;MQSB=0.907848;RPB=0.477033;SGB=83.5316;VDB=0.799008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.6:26703381 chr06:026703381 0 W/26703381-26703381 FN2489 SNP C -> A AC=1;AN=200;BQB=0.948844;DP=2694;DP4=1024,1271,2,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000371195;MQB=0.00778069;MQSB=1.15499e-12;RPB=0.997354;SGB=8.64371;VDB=0.953638;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.6:26704689 chr06:026704689 0 W/26704689-26704689 FN472-S Single Base Substitution G-T INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2656-S.SNP.6:26707474 chr06:026707474 0 W/26707474-26707474 FN2656-S SNP A -> T AC=1;AN=200;BQB=0.846536;DP=5249;DP4=2349,2549,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.55955e-19;MQSB=0.996115;RPB=0.945802;SGB=63.3521;VDB=0.889989;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.6:26708271 chr06:026708271 0 W/26708271-26708271 FN3927-S SNP C -> A AC=2;AN=158;BQB=0.717563;DP=2452;DP4=1361,969,25,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.37429e-16;MQSB=0.61045;RPB=0.312322;SGB=71.2076;VDB=0.433367;EFF=INTRON(MODIFIER||||328|LOC_Os06g44270|protein_coding|CODING|LOC_Os06g44270.1|1|1) FN-119.SNP.6:26713816 chr06:026713816 0 W/26713816-26713816 FN-119 Single Base Substitution A-G UTR_3_PRIME HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-119.SNP.6:26713817 chr06:026713817 0 W/26713817-26713817 FN-119 Single Base Substitution G-A UTR_3_PRIME HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3980-S.SNP.6:26716125 chr06:026716125 0 W/26716125-26716125 FN3980-S SNP G -> A AC=1;AN=168;BQB=0.565978;DP=2768;DP4=1216,1402,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00043268;MQSB=0.919567;RPB=0.993013;SGB=-18.3882;VDB=0.142881;EFF=INTRON(MODIFIER||||518|LOC_Os06g44280|protein_coding|CODING|LOC_Os06g44280.1|2|1) FN987-S.SNP.6:26720054 chr06:026720054 0 W/26720054-26720054 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN987-S.SNP.6:26720055 chr06:026720055 0 W/26720055-26720055 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN987-S.SNP.6:26720056 chr06:026720056 0 W/26720056-26720056 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN804-S.SNP.6:26723607 chr06:026723607 0 W/26723607-26723607 FN804-S Single Base Substitution C-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1176-S.SNP.6:26725481 chr06:026725481 0 W/26725481-26725481 FN1176-S Single Base Substitution T-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2304.SNP.6:26728015 chr06:026728015 0 W/26728015-26728015 FN2304 SNP T -> A AC=2;AN=192;BQB=0.637368;DP=4642;DP4=2127,2004,37,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.4863e-35;MQSB=0.960601;RPB=0.826463;SGB=76.1861;VDB=0.51735;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.6:26728019 chr06:026728019 0 W/26728019-26728019 FN2304 SNP G -> A AC=2;AN=192;BQB=0.987578;DP=4601;DP4=2236,2045,39,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.65075e-37;MQSB=0.939886;RPB=0.692409;SGB=-55.8034;VDB=0.759709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.6:26728227 chr06:026728227 0 W/26728227-26728227 FN2564-S SNP G -> T AC=1;AN=198;BQB=0.826684;DP=4270;DP4=2134,1969,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38683e-06;MQSB=0.710535;RPB=0.677117;SGB=11.1786;VDB=0.610755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L17F|799|LOC_Os06g44290|protein_coding|CODING|LOC_Os06g44290.1|1|1) FN815-S.SNP.6:26728589 chr06:026728589 0 W/26728589-26728589 FN815-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g44290 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3679-S.SNP.6:26733005 chr06:026733005 0 W/26733005-26733005 FN3679-S SNP A -> T AC=1;AN=190;BQB=0.737765;DP=2508;DP4=1202,1175,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000398724;MQB=2.38592e-09;MQSB=0.726237;RPB=0.765832;SGB=10.3266;VDB=0.971657;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.6:26741007 chr06:026741007 0 W/26741007-26741007 FN731-S Single Base Substitution C-T INTRON HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN3395-S.SNP.6:26741160 chr06:026741160 0 W/26741160-26741160 FN3395-S SNP T -> A AC=1;AN=184;BQB=0.999965;DP=2722;DP4=1221,1335,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74426e-05;MQSB=0.991399;RPB=0.81754;SGB=28.7043;VDB=0.867225;EFF=INTRON(MODIFIER||||627|LOC_Os06g44300|protein_coding|CODING|LOC_Os06g44300.1|4|1) FN3576-S.SNP.6:26741161 chr06:026741161 0 W/26741161-26741161 FN3576-S SNP A -> T AC=2;AN=188;BQB=0.98432;DP=2576;DP4=1224,1195,15,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000388199;MQB=1.02177e-08;MQSB=0.731877;RPB=0.464114;SGB=38.7926;VDB=0.033535;EFF=INTRON(MODIFIER||||627|LOC_Os06g44300|protein_coding|CODING|LOC_Os06g44300.1|4|1) FN1346-S.SNP.6:26741817 chr06:026741817 0 W/26741817-26741817 FN1346-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1346-S.SNP.6:26741818 chr06:026741818 0 W/26741818-26741818 FN1346-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g44300 WAX2, putative, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1346-S.SNP.6:26741819 chr06:026741819 0 W/26741819-26741819 FN1346-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g44300 WAX2, putative, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2684-S.SNP.6:26748250 chr06:026748250 0 W/26748250-26748250 FN2684-S SNP G -> A AC=2;AN=200;BQB=0.969867;DP=5106;DP4=2272,2584,19,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.06838e-20;MQSB=0.836473;RPB=0.875395;SGB=108.768;VDB=0.48646;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.6:26752986 chr06:026752986 0 W/26752986-26752986 FN896-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g44310 tetraspanin family protein, putative, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN3839-S.SNP.6:26753021 chr06:026753021 0 W/26753021-26753021 FN3839-S SNP G -> C AC=1;AN=190;BQB=0.915612;DP=3136;DP4=1284,1753,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.86718e-08;MQSB=0.981226;RPB=0.524319;SGB=49.0954;VDB=0.329992;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R137|269|LOC_Os06g44310|protein_coding|CODING|LOC_Os06g44310.1|1|1) FN-204.SNP.6:26753273 chr06:026753273 0 W/26753273-26753273 FN-204 Single Base Substitution A-G INTRON HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN_N1-202-3.SNP.6:26765226 chr06:026765226 0 W/26765226-26765226 FN_N1-202-3 Single Base Substitution C-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2781-S.SNP.6:26767404 chr06:026767404 0 W/26767404-26767404 FN2781-S SNP T -> A AC=2;AN=198;BQB=0.807187;DP=4167;DP4=1976,1966,19,22;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00263979;MQB=9.31262e-13;MQSB=0.0282611;RPB=0.897368;SGB=137.217;VDB=0.215307;EFF=INTRON(MODIFIER||||69|LOC_Os06g44330|protein_coding|CODING|LOC_Os06g44330.1|1|1) FN1264-S.SNP.6:26770456 chr06:026770456 0 W/26770456-26770456 FN1264-S Single Base Substitution A-G INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN883-S.SNP.6:26780417 chr06:026780417 0 W/26780417-26780417 FN883-S Single Base Substitution G-T INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3331-S.SNP.6:26784460 chr06:026784460 0 W/26784460-26784460 FN3331-S SNP C -> G AC=1;AN=184;BQB=0.914745;DP=3050;DP4=1697,1258,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67573e-08;MQSB=0.997197;RPB=0.410941;SGB=42.7914;VDB=0.786796;EFF=SPLICE_SITE_REGION(LOW||||69|LOC_Os06g44374|protein_coding|CODING|LOC_Os06g44374.1|2|1),INTRON(MODIFIER||||69|LOC_Os06g44374|protein_coding|CODING|LOC_Os06g44374.1|2|1) FN-411.SNP.6:26788379 chr06:026788379 0 W/26788379-26788379 FN-411 Single Base Substitution A-T INTRON HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2659-S.SNP.6:26788694 chr06:026788694 0 W/26788694-26788694 FN2659-S SNP A -> G AC=1;AN=200;BQB=0.490926;DP=4537;DP4=2225,2065,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94335e-12;MQSB=0.973976;RPB=0.872231;SGB=91.1059;VDB=0.300551;EFF=INTRON(MODIFIER||||1069|LOC_Os06g44380|protein_coding|CODING|LOC_Os06g44380.1|7|1) FN1163-S.SNP.6:26789212 chr06:026789212 0 W/26789212-26789212 FN1163-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g44380 ubiquitin carboxyl-terminal hydrolase family protein, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3776-S.SNP.6:26792533 chr06:026792533 0 W/26792533-26792533 FN3776-S SNP G -> A AC=2;AN=190;BQB=0.973919;DP=2889;DP4=1361,1425,15,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.03129e-12;MQSB=0.951849;RPB=0.683504;SGB=85.5263;VDB=0.0376945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.6:26794037 chr06:026794037 0 W/26794037-26794037 FN3692-S SNP C -> G AC=1;AN=190;BQB=0.963249;DP=2820;DP4=1155,1336,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80961e-06;MQSB=0.953573;RPB=0.844712;SGB=18.552;VDB=0.622288;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.6:26794037 chr06:026794037 0 W/26794037-26794037 FN446-S Single Base Substitution C-G INTERGENIC HOMO SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN4112-S.SNP.6:26794371 chr06:026794371 0 W/26794371-26794371 FN4112-S SNP T -> A AC=2;AN=182;BQB=0.804379;DP=2988;DP4=1290,1553,19,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.35529e-18;MQSB=0.942119;RPB=0.995586;SGB=126.91;VDB=0.853965;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.6:26799181 chr06:026799181 0 W/26799181-26799181 FN892-S Single Base Substitution G-A INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1470-S.SNP.6:26799993 chr06:026799993 0 W/26799993-26799993 FN1470-S Single Base Substitution C-G INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2454.SNP.6:26803595 chr06:026803595 0 W/26803595-26803595 FN2454 SNP G -> A AC=1;AN=200;BQB=0.372563;DP=4661;DP4=2082,2283,2,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0541e-06;MQSB=0.882127;RPB=0.986989;SGB=49.6594;VDB=0.146167;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.6:26808461 chr06:026808461 0 W/26808461-26808461 FN-287 Single Base Substitution C-T STOP_GAINED HET LOC_Os06g44410 histidine kinase, putative, expressed SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN1272-S.SNP.6:26810934 chr06:026810934 0 W/26810934-26810934 FN1272-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g44410 histidine kinase, putative, expressed SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN731-S.SNP.6:26817035 chr06:026817035 0 W/26817035-26817035 FN731-S Single Base Substitution T-C INTERGENIC HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN470-S.SNP.6:26817594 chr06:026817594 0 W/26817594-26817594 FN470-S Single Base Substitution T-C INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2333.SNP.6:26818053 chr06:026818053 0 W/26818053-26818053 FN2333 SNP T -> A AC=1;AN=192;BQB=0.893124;DP=4911;DP4=2006,2675,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.93937e-06;MQSB=0.996798;RPB=0.866672;SGB=35.5177;VDB=0.0140643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.6:26820408 chr06:026820408 0 W/26820408-26820408 FN3417-S SNP T -> A AC=1;AN=184;BQB=0.778783;DP=2726;DP4=1204,1417,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.22521e-05;MQSB=0.90182;RPB=0.454867;SGB=48.7425;VDB=0.983005;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.6:26825887 chr06:026825887 0 W/26825887-26825887 FN728-S Single Base Substitution T-C INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN3522-S.SNP.6:26832941 chr06:026832941 0 W/26832941-26832941 FN3522-S SNP T -> A AC=1;AN=188;BQB=0.919388;DP=2447;DP4=1270,1095,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.86932e-06;MQSB=0.872708;RPB=0.715915;SGB=35.3493;VDB=0.180184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.6:26834277 chr06:026834277 0 W/26834277-26834277 FN1701-S SNP A -> C AC=1;AN=188;BQB=0.807469;DP=3153;DP4=1630,1488,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.14718e-09;MQSB=0.909101;RPB=0.993303;SGB=5.5382;VDB=0.601875;EFF=INTRON(MODIFIER||||392|LOC_Os06g44430|protein_coding|CODING|LOC_Os06g44430.1|2|1) FN2195-S.SNP.6:26837916 chr06:026837916 0 W/26837916-26837916 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.464799;DP=3825;DP4=1754,1848,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00353253;MQSB=0.970374;RPB=0.331759;SGB=25.439;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.6:26838388 chr06:026838388 0 W/26838388-26838388 FN-143 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g44440 retrotransposon protein, putative, unclassified SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN901-S.SNP.6:26842213 chr06:026842213 0 W/26842213-26842213 FN901-S Single Base Substitution C-T INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2684-S.SNP.6:26844928 chr06:026844928 0 W/26844928-26844928 FN2684-S SNP T -> A AC=2;AN=200;BQB=0.449794;DP=2981;DP4=1592,994,16,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=5.22276e-09;MQSB=8.4091e-25;RPB=0.908034;SGB=30.3571;VDB=0.0607959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.6:26845659 chr06:026845659 0 W/26845659-26845659 FN1071-S Single Base Substitution G-A INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN-370.SNP.6:26845994 chr06:026845994 0 W/26845994-26845994 FN-370 Single Base Substitution G-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN455-S.SNP.6:26847322 chr06:026847322 0 W/26847322-26847322 FN455-S Single Base Substitution C-T INTERGENIC HOMO SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1701-S.SNP.6:26854310 chr06:026854310 0 W/26854310-26854310 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.21132;DP=3858;DP4=1834,1982,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.73315e-07;MQSB=0.925124;RPB=0.525836;SGB=-86.4405;VDB=0.279301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.6:26854365 chr06:026854365 0 W/26854365-26854365 FN3522-S SNP T -> G AC=2;AN=188;BQB=0.957825;DP=2902;DP4=1590,1220,15,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.47338e-13;MQSB=0.992471;RPB=0.937547;SGB=94.4119;VDB=0.807885;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.6:26858058 chr06:026858058 0 W/26858058-26858058 FN-71 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g44460 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3412-S.SNP.6:26858869 chr06:026858869 0 W/26858869-26858869 FN3412-S SNP A -> G AC=1;AN=184;BQB=0.671946;DP=3376;DP4=1718,1491,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1878e-05;MQSB=0.998195;RPB=0.985587;SGB=2.23696;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.6:26874575 chr06:026874575 0 W/26874575-26874575 FN1633-S Single Base Substitution C-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2459.SNP.6:26875108 chr06:026875108 0 W/26875108-26875108 FN2459 SNP A -> T AC=1;AN=200;BQB=0.617012;DP=5008;DP4=1983,2593,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.62499e-12;MQSB=0.56574;RPB=0.960061;SGB=72.7161;VDB=0.864873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.6:26875237 chr06:026875237 0 W/26875237-26875237 FN1485-S Single Base Substitution A-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN3439-S.SNP.6:26882178 chr06:026882178 0 W/26882178-26882178 FN3439-S SNP G -> A AC=1;AN=184;BQB=0.963908;DP=1802;DP4=1021,728,2,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000381264;MQSB=0.903148;RPB=0.895745;SGB=21.6146;VDB=0.0476592;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.6:26882587 chr06:026882587 0 W/26882587-26882587 FN450-S Single Base Substitution C-T INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN-174.SNP.6:26886974 chr06:026886974 0 W/26886974-26886974 FN-174 Single Base Substitution C-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3667-S.SNP.6:26890220 chr06:026890220 0 W/26890220-26890220 FN3667-S SNP C -> G AC=1;AN=190;BQB=0.822348;DP=3148;DP4=1214,1827,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000344385;MQSB=2.95774e-05;RPB=0.586774;SGB=71.8647;VDB=0.590067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.6:26894130 chr06:026894130 0 W/26894130-26894130 FN1237-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2458.SNP.6:26894985 chr06:026894985 0 W/26894985-26894985 FN2458 SNP C -> T AC=1;AN=200;BQB=0.271958;DP=5334;DP4=2412,2497,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39517e-09;MQSB=0.251178;RPB=0.856471;SGB=-36.1052;VDB=0.556518;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.6:26908908 chr06:026908908 0 W/26908908-26908908 FN857-S Single Base Substitution A-T INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN687-S.SNP.6:26910038 chr06:026910038 0 W/26910038-26910038 FN687-S Single Base Substitution T-C INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1423-S.SNP.6:26916819 chr06:026916819 0 W/26916819-26916819 FN1423-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os06g44570 retrotransposon protein, putative, unclassified, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3523-S.SNP.6:26920085 chr06:026920085 0 W/26920085-26920085 FN3523-S SNP T -> C AC=1;AN=188;BQB=0.851438;DP=4277;DP4=2796,1335,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.70097e-08;MQSB=0.000843689;RPB=0.160579;SGB=23.5329;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.6:26922513 chr06:026922513 0 W/26922513-26922513 FN1739-S SNP T -> C AC=1;AN=188;BQB=0.194125;DP=2446;DP4=1329,1070,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.187244;MQB=0.0533082;MQSB=0.00367581;RPB=0.99255;SGB=-79.0704;VDB=0.0892738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I1513V|1857|LOC_Os06g44590|protein_coding|CODING|LOC_Os06g44590.1|3|1) FN569-S.SNP.6:26923233 chr06:026923233 0 W/26923233-26923233 FN569-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g44590 retrotransposon protein, putative, unclassified, expressed SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN964-S.SNP.6:26924576 chr06:026924576 0 W/26924576-26924576 FN964-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g44590 retrotransposon protein, putative, unclassified, expressed SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3788-S.SNP.6:26927231 chr06:026927231 0 W/26927231-26927231 FN3788-S SNP G -> T AC=2;AN=190;BQB=0.895415;DP=2574;DP4=1298,1163,8,7;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0003885;MQB=6.50409e-05;MQSB=0.330041;RPB=0.972782;SGB=43.2083;VDB=0.737392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A5E|1857|LOC_Os06g44590|protein_coding|CODING|LOC_Os06g44590.1|1|1) FN3434-S.SNP.6:26928171 chr06:026928171 0 W/26928171-26928171 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.970202;DP=2088;DP4=652,1358,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.233716;MQB=0.380825;MQSB=0;RPB=0.126052;SGB=48.7425;VDB=0.611913;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G98D|108|LOC_Os06g44600|protein_coding|CODING|LOC_Os06g44600.1|1|1) FN1725-S.SNP.6:26931165 chr06:026931165 0 W/26931165-26931165 FN1725-S SNP T -> C AC=2;AN=188;BQB=0.177389;DP=4060;DP4=2068,1929,28,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.10418e-20;MQSB=0.907089;RPB=0.236729;SGB=-109.974;VDB=0.983078;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.6:26931469 chr06:026931469 0 W/26931469-26931469 FN1136-19-S Single Base Substitution G-C INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN4179-S.SNP.6:26933440 chr06:026933440 0 W/26933440-26933440 FN4179-S SNP A -> C AC=1;AN=170;BQB=0.925224;DP=2264;DP4=1206,990,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.59298e-06;MQSB=0.999869;RPB=0.959949;SGB=34.5445;VDB=0.660946;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.6:26942994 chr06:026942994 0 W/26942994-26942994 FN_N1-220-1 Single Base Substitution C-G Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3426-S.SNP.6:26945341 chr06:026945341 0 W/26945341-26945341 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.81985;DP=2658;DP4=1192,1397,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11682e-08;MQSB=0.999556;RPB=0.82575;SGB=49.835;VDB=0.514804;EFF=UTR_3_PRIME(MODIFIER||1544||445|LOC_Os06g44620|protein_coding|CODING|LOC_Os06g44620.2|3|1),INTRON(MODIFIER||||559|LOC_Os06g44620|protein_coding|CODING|LOC_Os06g44620.1|3|1) FN3982-S.SNP.6:26947802 chr06:026947802 0 W/26947802-26947802 FN3982-S SNP C -> T AC=1;AN=168;BQB=0.388359;DP=2976;DP4=1390,1438,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.42216e-09;MQSB=0.999544;RPB=0.579645;SGB=9.91396;VDB=0.638587;EFF=INTRON(MODIFIER||||559|LOC_Os06g44620|protein_coding|CODING|LOC_Os06g44620.1|2|1),INTRON(MODIFIER||||445|LOC_Os06g44620|protein_coding|CODING|LOC_Os06g44620.2|2|1) FN2446.SNP.6:26952101 chr06:026952101 0 W/26952101-26952101 FN2446 SNP G -> C AC=1;AN=200;BQB=0.418367;DP=4591;DP4=2299,2030,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.03694e-08;MQSB=0.964499;RPB=0.456695;SGB=33.0593;VDB=0.275958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.6:26952880 chr06:026952880 0 W/26952880-26952880 FN2467 SNP C -> T AC=1;AN=200;BQB=0.878521;DP=4070;DP4=2051,1767,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.22047e-11;MQSB=0.678733;RPB=0.789469;SGB=81.8956;VDB=0.633565;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L85|281|LOC_Os06g44630|protein_coding|CODING|LOC_Os06g44630.1|1|1) FN-226.SNP.6:26955599 chr06:026955599 0 W/26955599-26955599 FN-226 Single Base Substitution G-A INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2407.SNP.6:26957564 chr06:026957564 0 W/26957564-26957564 FN2407 SNP T -> C AC=1;AN=200;BQB=0.946263;DP=4450;DP4=1854,2006,5,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.84885e-10;MQSB=0.962525;RPB=0.974497;SGB=-36.8949;VDB=0.240576;EFF=UTR_3_PRIME(MODIFIER||171||289|LOC_Os06g44660|protein_coding|CODING|LOC_Os06g44660.1|1|1) FN4051-S.SNP.6:26958229 chr06:026958229 0 W/26958229-26958229 FN4051-S SNP C -> A AC=1;AN=168;BQB=0.964998;DP=2361;DP4=814,1419,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91297e-07;MQSB=0.904309;RPB=0.927783;SGB=56.6036;VDB=0.657675;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V126L|289|LOC_Os06g44660|protein_coding|CODING|LOC_Os06g44660.1|1|1) FN901-S.SNP.6:26959456 chr06:026959456 0 W/26959456-26959456 FN901-S Single Base Substitution G-T INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3532-S.SNP.6:26960327 chr06:026960327 0 W/26960327-26960327 FN3532-S SNP G -> C AC=1;AN=188;BQB=0.789295;DP=2767;DP4=1129,1531,8,29;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000361402;MQB=1.97027e-15;MQSB=0.987935;RPB=0.752736;SGB=37.9474;VDB=0.89737;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.6:26960457 chr06:026960457 0 W/26960457-26960457 FN-214 Single Base Substitution T-A INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2205-S.SNP.6:26961169 chr06:026961169 0 W/26961169-26961169 FN2205-S SNP C -> T AC=2;AN=190;BQB=0.526999;DP=2978;DP4=1500,1182,21,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000335796;MQB=5.85325e-13;MQSB=0.995052;RPB=0.215369;SGB=149.281;VDB=0.048255;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R67Q|143|LOC_Os06g44670|protein_coding|CODING|LOC_Os06g44670.1|1|1) FN3407-S.SNP.6:26961272 chr06:026961272 0 W/26961272-26961272 FN3407-S SNP T -> C AC=1;AN=184;BQB=0.260376;DP=2946;DP4=1391,1320,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.0807e-07;MQSB=0.958578;RPB=0.45451;SGB=-97.3012;VDB=0.990865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S33G|143|LOC_Os06g44670|protein_coding|CODING|LOC_Os06g44670.1|1|1) FN438-S.SNP.6:26964117 chr06:026964117 0 W/26964117-26964117 FN438-S Single Base Substitution T-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN438-S.SNP.6:26964118 chr06:026964118 0 W/26964118-26964118 FN438-S Single Base Substitution G-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN-140.SNP.6:26968906 chr06:026968906 0 W/26968906-26968906 FN-140 Single Base Substitution G-T INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1239-S.SNP.6:26970460 chr06:026970460 0 W/26970460-26970460 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3657-S.SNP.6:26975701 chr06:026975701 0 W/26975701-26975701 FN3657-S SNP C -> A AC=1;AN=190;BQB=0.996766;DP=3041;DP4=1440,1471,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.13406e-15;MQSB=0.990614;RPB=0.979738;SGB=-9.34484;VDB=0.938587;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.6:26983225 chr06:026983225 0 W/26983225-26983225 705-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN3658-S.SNP.6:26984571 chr06:026984571 0 W/26984571-26984571 FN3658-S SNP G -> T AC=2;AN=190;BQB=0.765034;DP=2533;DP4=1135,1204,11,4;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.0307935;MQB=0.918859;MQSB=1.80609e-09;RPB=0.789523;SGB=43.2083;VDB=0.983631;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.6:26985313 chr06:026985313 0 W/26985313-26985313 FN1330-S Single Base Substitution T-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2780-S.SNP.6:26987960 chr06:026987960 0 W/26987960-26987960 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.908175;DP=4400;DP4=2091,2098,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0859091;MQB=0.357165;MQSB=0;RPB=0.250685;SGB=22.1104;VDB=0.435625;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.6:26991005 chr06:026991005 0 W/26991005-26991005 FN2267-S SNP T -> G AC=1;AN=190;BQB=0.999532;DP=4604;DP4=2239,1903,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0538662;MQB=0.966377;MQSB=0.275598;RPB=0.945013;SGB=-9.89872;VDB=0.550452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W308G|436|LOC_Os06g44710|protein_coding|CODING|LOC_Os06g44710.1|3|1) FN-61.SNP.6:26992244 chr06:026992244 0 W/26992244-26992244 FN-61 Single Base Substitution C-T INTRON HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3481-S.SNP.6:26997288 chr06:026997288 0 W/26997288-26997288 FN3481-S SNP C -> T AC=1;AN=184;BQB=0.820912;DP=2789;DP4=1246,1452,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00322696;MQB=5.70099e-09;MQSB=0.0442976;RPB=0.92081;SGB=98.4821;VDB=0.804029;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.6:27003778 chr06:027003778 0 W/27003778-27003778 FN4049-S SNP T -> A AC=1;AN=168;BQB=0.974699;DP=3034;DP4=1236,1663,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000988794;MQB=3.71046e-11;MQSB=0.808033;RPB=0.445397;SGB=11.3448;VDB=0.080726;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R679|809|LOC_Os06g44740|protein_coding|CODING|LOC_Os06g44740.1|7|1) FN2447.SNP.6:27006766 chr06:027006766 0 W/27006766-27006766 FN2447 SNP G -> A AC=1;AN=200;BQB=0.827208;DP=4414;DP4=2050,2137,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.77009e-08;MQSB=0.999875;RPB=0.784133;SGB=49.6594;VDB=0.766987;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.6:27006873 chr06:027006873 0 W/27006873-27006873 FN416-S Single Base Substitution C-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3577-S.SNP.6:27020559 chr06:027020559 0 W/27020559-27020559 FN3577-S SNP G -> T AC=2;AN=188;BQB=0.999998;DP=2472;DP4=1025,1354,10,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.16341e-16;MQSB=0.936503;RPB=0.933769;SGB=56.5957;VDB=0.278704;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.6:27024792 chr06:027024792 0 W/27024792-27024792 W278-3-1 Single Base Substitution A-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3771-S.SNP.6:27029266 chr06:027029266 0 W/27029266-27029266 FN3771-S SNP C -> T AC=1;AN=190;BQB=0.995208;DP=2817;DP4=1300,1386,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00177494;MQB=0.00848403;MQSB=0.7691;RPB=0.875415;SGB=57.4238;VDB=0.426413;EFF=UTR_3_PRIME(MODIFIER||301||263|LOC_Os06g44750|protein_coding|CODING|LOC_Os06g44750.1|8|1) FN1261-S.SNP.6:27043005 chr06:027043005 0 W/27043005-27043005 FN1261-S Single Base Substitution A-C INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2544-S.SNP.6:27046256 chr06:027046256 0 W/27046256-27046256 FN2544-S SNP C -> T AC=1;AN=198;BQB=0.224103;DP=3689;DP4=1835,1668,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.28412e-09;MQSB=0.727199;RPB=0.946409;SGB=58.7391;VDB=0.666721;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.6:27046256 chr06:027046256 0 W/27046256-27046256 FN926-S Single Base Substitution C-T INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN4180-S.SNP.6:27046483 chr06:027046483 0 W/27046483-27046483 FN4180-S SNP G -> A AC=1;AN=170;BQB=0.985291;DP=2248;DP4=1033,1152,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000103692;MQSB=0.273794;RPB=0.493359;SGB=21.1076;VDB=0.567736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.6:27065569 chr06:027065569 0 W/27065569-27065569 FN2500 SNP A -> G AC=2;AN=200;BQB=0.635519;DP=4067;DP4=1845,2012,25,18;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0990902;MQB=0.0248965;MQSB=0.012804;RPB=0.992665;SGB=97.2193;VDB=0.660234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Cat|Y358H|754|LOC_Os06g44800|protein_coding|CODING|LOC_Os06g44800.1|3|1) FN2233-S.SNP.6:27071622 chr06:027071622 0 W/27071622-27071622 FN2233-S SNP T -> A AC=1;AN=190;BQB=0.664313;DP=5231;DP4=2593,2368,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7728e-07;MQSB=0.989084;RPB=0.927341;SGB=39.9877;VDB=0.481016;EFF=INTRON(MODIFIER||||481|LOC_Os06g44810|protein_coding|CODING|LOC_Os06g44810.1|4|1) FN2233-S.SNP.6:27071623 chr06:027071623 0 W/27071623-27071623 FN2233-S SNP G -> A AC=1;AN=190;BQB=0.0277886;DP=5202;DP4=2559,2366,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50428e-06;MQSB=0.999564;RPB=0.992282;SGB=18.552;VDB=0.595846;EFF=INTRON(MODIFIER||||481|LOC_Os06g44810|protein_coding|CODING|LOC_Os06g44810.1|4|1) FN2233-S.SNP.6:27071625 chr06:027071625 0 W/27071625-27071625 FN2233-S SNP T -> A AC=1;AN=190;BQB=0.0183615;DP=5178;DP4=2555,2353,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02183e-06;MQSB=0.99885;RPB=0.977132;SGB=28.9929;VDB=0.575864;EFF=INTRON(MODIFIER||||481|LOC_Os06g44810|protein_coding|CODING|LOC_Os06g44810.1|4|1) FN4111-S.SNP.6:27074693 chr06:027074693 0 W/27074693-27074693 FN4111-S SNP G -> T AC=1;AN=182;BQB=0.828371;DP=3325;DP4=1776,1461,13,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.96397e-19;MQSB=0.98943;RPB=0.368484;SGB=134.329;VDB=0.188231;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.6:27076574 chr06:027076574 0 W/27076574-27076574 FN930-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g44820 PPR repeat domain containing protein, putative, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN930-S.SNP.6:27076601 chr06:027076601 0 W/27076601-27076601 FN930-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g44820 PPR repeat domain containing protein, putative, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2426.SNP.6:27078473 chr06:027078473 0 W/27078473-27078473 FN2426 SNP C -> T AC=1;AN=200;BQB=0.81509;DP=5218;DP4=2667,2143,28,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91234e-24;MQSB=0.9649;RPB=0.0840926;SGB=94.6142;VDB=0.905397;EFF=INTERGENIC(MODIFIER||||||||||1) FN2306.SNP.6:27083046 chr06:027083046 0 W/27083046-27083046 FN2306 SNP G -> A AC=1;AN=192;BQB=0.15961;DP=3134;DP4=1466,1273,6,3;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00127632;MQB=0.00726913;MQSB=0.000429282;RPB=0.539889;SGB=21.9585;VDB=0.76965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.6:27083294 chr06:027083294 0 W/27083294-27083294 FN1195-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1565-S.SNP.6:27083846 chr06:027083846 0 W/27083846-27083846 FN1565-S Single Base Substitution A-T INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2206-S.SNP.6:27084522 chr06:027084522 0 W/27084522-27084522 FN2206-S SNP G -> A AC=1;AN=190;BQB=0.699236;DP=5311;DP4=2400,2508,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000188288;MQB=2.64961e-11;MQSB=0.713337;RPB=0.981833;SGB=-11.5603;VDB=0.191274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.6:27091270 chr06:027091270 0 W/27091270-27091270 FN3767-S SNP C -> T AC=1;AN=190;BQB=0.931031;DP=2560;DP4=1267,1219,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99273e-07;MQSB=0.918486;RPB=0.969129;SGB=28.9929;VDB=0.17485;EFF=INTRON(MODIFIER||||404|LOC_Os06g44840|protein_coding|CODING|LOC_Os06g44840.1|8|1),INTRON(MODIFIER||||370|LOC_Os06g44840|protein_coding|CODING|LOC_Os06g44840.2|7|1) FN3455-S.SNP.6:27092626 chr06:027092626 0 W/27092626-27092626 FN3455-S SNP T -> C AC=1;AN=184;BQB=0.889532;DP=2544;DP4=1197,1243,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.64887e-10;MQSB=0.832668;RPB=0.50049;SGB=66.8296;VDB=0.332651;EFF=UTR_3_PRIME(MODIFIER||129||404|LOC_Os06g44840|protein_coding|CODING|LOC_Os06g44840.1|13|1),UTR_3_PRIME(MODIFIER||129||370|LOC_Os06g44840|protein_coding|CODING|LOC_Os06g44840.2|12|1) FN3568-S.SNP.6:27096844 chr06:027096844 0 W/27096844-27096844 FN3568-S SNP C -> T AC=2;AN=188;BQB=0.999074;DP=2975;DP4=1568,1294,29,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.58647e-24;MQSB=0.683104;RPB=0.908105;SGB=189.821;VDB=0.802129;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.6:27098496 chr06:027098496 0 W/27098496-27098496 FN1551-S Single Base Substitution G-T INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN3837-S.SNP.6:27102897 chr06:027102897 0 W/27102897-27102897 FN3837-S SNP A -> G AC=1;AN=190;BQB=0.93649;DP=2380;DP4=1284,1006,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.974e-06;MQSB=0.531896;RPB=0.728345;SGB=21.8853;VDB=0.237542;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.6:27104610 chr06:027104610 0 W/27104610-27104610 FN4135-S SNP G -> T AC=2;AN=182;BQB=0.913777;DP=3188;DP4=1441,1654,18,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.49657e-19;MQSB=0.951395;RPB=0.620466;SGB=143.35;VDB=0.452095;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.6:27106216 chr06:027106216 0 W/27106216-27106216 FN860-S Single Base Substitution C-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN860-S.SNP.6:27106217 chr06:027106217 0 W/27106217-27106217 FN860-S Single Base Substitution T-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN594-S.SNP.6:27114629 chr06:027114629 0 W/27114629-27114629 FN594-S Single Base Substitution C-T INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN896-S.SNP.6:27116801 chr06:027116801 0 W/27116801-27116801 FN896-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g44860 OsSPL10 - SBP-box gene family member, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. W596-1-1.SNP.6:27132597 chr06:027132597 0 W/27132597-27132597 W596-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN3064-S.SNP.6:27134937 chr06:027134937 0 W/27134937-27134937 FN3064-S SNP C -> T AC=2;AN=184;BQB=0.763724;DP=2732;DP4=1470,1156,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.82902e-13;MQSB=0.999283;RPB=0.898636;SGB=70.9657;VDB=0.665494;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.6:27141149 chr06:027141149 0 W/27141149-27141149 FN859-S Single Base Substitution C-T INTRON HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN2698-S.SNP.6:27144072 chr06:027144072 0 W/27144072-27144072 FN2698-S SNP A -> T AC=1;AN=200;BQB=0.0714464;DP=5143;DP4=2477,2431,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.4102e-09;MQSB=0.996013;RPB=0.237152;SGB=34.6953;VDB=0.923222;EFF=INTRON(MODIFIER||||1016|LOC_Os06g44890|protein_coding|CODING|LOC_Os06g44890.1|1|1) FN3482-S.SNP.6:27147204 chr06:027147204 0 W/27147204-27147204 FN3482-S SNP G -> A AC=1;AN=184;BQB=0.931626;DP=3158;DP4=1290,1757,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.70558e-13;MQSB=0.743022;RPB=0.82906;SGB=89.4385;VDB=0.790202;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.6:27163701 chr06:027163701 0 W/27163701-27163701 FN1057-S Single Base Substitution C-T INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1751-S.SNP.6:27167835 chr06:027167835 0 W/27167835-27167835 FN1751-S SNP T -> C AC=1;AN=188;BQB=0.172732;DP=3385;DP4=1653,1701,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.9235e-08;MQSB=0.987477;RPB=0.512322;SGB=-66.2726;VDB=0.689881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.6:27170104 chr06:027170104 0 W/27170104-27170104 FN1753-S SNP C -> A AC=1;AN=188;BQB=0.698531;DP=3336;DP4=1635,1663,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.1242e-12;MQSB=0.85687;RPB=0.612471;SGB=38.7926;VDB=0.165838;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.6:27172694 chr06:027172694 0 W/27172694-27172694 FN-179 Single Base Substitution T-C INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3851-S.SNP.6:27179888 chr06:027179888 0 W/27179888-27179888 FN3851-S SNP G -> A AC=2;AN=156;BQB=0.932281;DP=2200;DP4=1118,972,12,8;HOB=0.0253123;ICB=0.493673;MQ=49;MQ0F=0;MQB=2.61671e-10;MQSB=0.136286;RPB=0.437559;SGB=82.0227;VDB=0.736172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E154K|184|LOC_Os06g44940|protein_coding|CODING|LOC_Os06g44940.1|1|1) FN3526-S.SNP.6:27180963 chr06:027180963 0 W/27180963-27180963 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.69897;DP=3330;DP4=1475,1784,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.47276e-07;MQSB=0.192848;RPB=0.97889;SGB=71.6954;VDB=0.793201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.6:27181758 chr06:027181758 0 W/27181758-27181758 FN-285 Single Base Substitution G-A INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-182.SNP.6:27183136 chr06:027183136 0 W/27183136-27183136 FN-182 Single Base Substitution C-T INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2574-S.SNP.6:27184586 chr06:027184586 0 W/27184586-27184586 FN2574-S SNP C -> T AC=1;AN=198;BQB=0.993797;DP=3863;DP4=1890,1745,3,3;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.137458;MQB=0.697929;MQSB=1.69383e-07;RPB=0.944057;SGB=21.981;VDB=0.871216;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D74|2027|LOC_Os06g44950|protein_coding|CODING|LOC_Os06g44950.1|1|1) FN2229-S.SNP.6:27188926 chr06:027188926 0 W/27188926-27188926 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.980053;DP=4080;DP4=1885,1862,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.0642157;MQB=0.923336;MQSB=1.73208e-14;RPB=0.520856;SGB=46.7622;VDB=0.00970842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R1497H|2027|LOC_Os06g44950|protein_coding|CODING|LOC_Os06g44950.1|2|1) FN3997-S.SNP.6:27189136 chr06:027189136 0 W/27189136-27189136 FN3997-S SNP C -> T AC=2;AN=168;BQB=0.952193;DP=2598;DP4=1245,1232,12,12;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.103926;MQB=0.470952;MQSB=0.193552;RPB=0.80941;SGB=44.0621;VDB=0.912262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1567L|2027|LOC_Os06g44950|protein_coding|CODING|LOC_Os06g44950.1|2|1) FN2489.SNP.6:27199442 chr06:027199442 0 W/27199442-27199442 FN2489 SNP C -> A AC=1;AN=200;BQB=0.0279116;DP=5013;DP4=2443,2222,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.80031e-16;MQSB=0.902582;RPB=0.986786;SGB=36.7778;VDB=0.771011;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.6:27200871 chr06:027200871 0 W/27200871-27200871 FN4037-S SNP G -> A AC=1;AN=168;BQB=0.969048;DP=2666;DP4=1576,964,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.7918e-07;MQSB=0.904427;RPB=0.948644;SGB=56.6036;VDB=0.15051;EFF=UTR_5_PRIME(MODIFIER||12||630|LOC_Os06g44970|protein_coding|CODING|LOC_Os06g44970.1|1|1) FN1009-S.SNP.6:27206777 chr06:027206777 0 W/27206777-27206777 FN1009-S Single Base Substitution G-T INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3537-S.SNP.6:27209505 chr06:027209505 0 W/27209505-27209505 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.309871;DP=2688;DP4=1349,1230,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.11265e-06;MQSB=0.925102;RPB=0.087164;SGB=39.5276;VDB=0.552277;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.6:27210353 chr06:027210353 0 W/27210353-27210353 FN3897-S SNP C -> A AC=1;AN=156;BQB=0.944389;DP=2837;DP4=1436,1234,17,8;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.11115e-14;MQSB=0.939578;RPB=0.108369;SGB=74.5068;VDB=0.175909;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.6:27210355 chr06:027210355 0 W/27210355-27210355 FN3897-S SNP G -> T AC=1;AN=156;BQB=0.979385;DP=2872;DP4=1455,1259,15,9;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=3.78666e-14;MQSB=0.895195;RPB=0.177775;SGB=71.1374;VDB=0.0921757;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.6:27210733 chr06:027210733 0 W/27210733-27210733 FN2401 SNP T -> C AC=1;AN=200;BQB=0.71119;DP=4138;DP4=1910,1979,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.38227e-15;MQSB=0.317731;RPB=0.606268;SGB=87.1368;VDB=0.273478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.6:27215250 chr06:027215250 0 W/27215250-27215250 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.844416;DP=4163;DP4=2101,1883,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00696613;MQB=6.06208e-09;MQSB=0.238974;RPB=0.987314;SGB=90.9049;VDB=0.274839;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G188R|373|LOC_Os06g44990|protein_coding|CODING|LOC_Os06g44990.1|2|1) FN-176.SNP.6:27232057 chr06:027232057 0 W/27232057-27232057 FN-176 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g45020 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN-272.SNP.6:27233715 chr06:027233715 0 W/27233715-27233715 FN-272 Single Base Substitution A-G INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3105-S.SNP.6:27240716 chr06:027240716 0 W/27240716-27240716 FN3105-S SNP A -> G AC=2;AN=184;BQB=0.758852;DP=3281;DP4=1373,1665,8,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.26387e-14;MQSB=0.464313;RPB=0.999541;SGB=48.493;VDB=0.534944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.6:27245186 chr06:027245186 0 W/27245186-27245186 FN3596-S SNP C -> A AC=2;AN=188;BQB=0.662998;DP=3047;DP4=1533,1452,10,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.02913e-11;MQSB=0.51344;RPB=0.699699;SGB=112.585;VDB=0.563269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D202Y|912|LOC_Os06g45030|protein_coding|CODING|LOC_Os06g45030.1|4|1) FN_841-7-2.SNP.6:27245973 chr06:027245973 0 W/27245973-27245973 FN_841-7-2 Single Base Substitution T-A HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN1310-S.SNP.6:27249377 chr06:027249377 0 W/27249377-27249377 FN1310-S Single Base Substitution C-T INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN-370.SNP.6:27250975 chr06:027250975 0 W/27250975-27250975 FN-370 Single Base Substitution G-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.6:27250976 chr06:027250976 0 W/27250976-27250976 FN-370 Single Base Substitution T-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2351.SNP.6:27254828 chr06:027254828 0 W/27254828-27254828 FN2351 SNP G -> T AC=2;AN=192;BQB=0.931301;DP=5039;DP4=2503,2276,19,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.56038e-30;MQSB=0.856575;RPB=0.393041;SGB=110.973;VDB=0.365814;EFF=INTRON(MODIFIER||||274|LOC_Os06g45040|protein_coding|CODING|LOC_Os06g45040.1|1|1) FN1759-S.SNP.6:27259341 chr06:027259341 0 W/27259341-27259341 FN1759-S SNP G -> A AC=2;AN=188;BQB=0.930537;DP=3650;DP4=1853,1747,17,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.8286e-19;MQSB=0.969801;RPB=0.654717;SGB=69.3122;VDB=0.0919437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R238K|531|LOC_Os06g45050|protein_coding|CODING|LOC_Os06g45050.1|9|1) FN1759-S.SNP.6:27259342 chr06:027259342 0 W/27259342-27259342 FN1759-S SNP G -> A AC=2;AN=188;BQB=0.176597;DP=3657;DP4=1845,1761,21,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.49212e-15;MQSB=0.96569;RPB=0.463115;SGB=-130.661;VDB=0.327622;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R238|531|LOC_Os06g45050|protein_coding|CODING|LOC_Os06g45050.1|9|1) FN-227.SNP.6:27263314 chr06:027263314 0 W/27263314-27263314 FN-227 Single Base Substitution A-G INTRON HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2491.SNP.6:27270839 chr06:027270839 0 W/27270839-27270839 FN2491 SNP C -> T AC=1;AN=200;BQB=0.440308;DP=4879;DP4=2143,2337,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.59649e-06;MQSB=0.999706;RPB=0.181873;SGB=-0.141083;VDB=0.974716;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.6:27279489 chr06:027279489 0 W/27279489-27279489 FN3324-S SNP T -> C AC=1;AN=184;BQB=0.984337;DP=2698;DP4=1337,1265,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51312e-06;MQSB=0.422258;RPB=0.962928;SGB=48.7425;VDB=0.897589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.6:27289729 chr06:027289729 0 W/27289729-27289729 FN2650-S SNP T -> C AC=1;AN=200;BQB=0.588894;DP=5257;DP4=2660,2430,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92015e-12;MQSB=0.954892;RPB=0.822765;SGB=58.2954;VDB=0.697207;EFF=INTRON(MODIFIER||||620|LOC_Os06g45120|protein_coding|CODING|LOC_Os06g45120.1|11|1),INTRON(MODIFIER||||565|LOC_Os06g45120|protein_coding|CODING|LOC_Os06g45120.2|11|1) FN1202-S.SNP.6:27291162 chr06:027291162 0 W/27291162-27291162 FN1202-S Single Base Substitution G-C SPLICE_SITE_REGION HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1273-S.SNP.6:27291380 chr06:027291380 0 W/27291380-27291380 FN1273-S Single Base Substitution A-T INTRON HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN518-S.SNP.6:27298892 chr06:027298892 0 W/27298892-27298892 FN518-S Single Base Substitution T-A INTERGENIC HOMO SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2268-S.SNP.6:27300988 chr06:027300988 0 W/27300988-27300988 FN2268-S SNP A -> C AC=2;AN=190;BQB=0.662831;DP=5136;DP4=2303,2403,27,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1082e-20;MQSB=0.935706;RPB=0.937263;SGB=149.825;VDB=0.824807;EFF=UTR_3_PRIME(MODIFIER||91||230|LOC_Os06g45140|protein_coding|CODING|LOC_Os06g45140.2|4|1),INTRON(MODIFIER||||295|LOC_Os06g45140|protein_coding|CODING|LOC_Os06g45140.1|4|1),INTRON(MODIFIER||||220|LOC_Os06g45140|protein_coding|CODING|LOC_Os06g45140.3|4|1) FN482-S.SNP.6:27304442 chr06:027304442 0 W/27304442-27304442 FN482-S Single Base Substitution G-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN482-S.SNP.6:27304443 chr06:027304443 0 W/27304443-27304443 FN482-S Single Base Substitution T-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN2670-S.SNP.6:27312656 chr06:027312656 0 W/27312656-27312656 FN2670-S SNP G -> C AC=1;AN=200;BQB=0.959675;DP=5057;DP4=2518,2286,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52777e-13;MQSB=0.961131;RPB=0.98792;SGB=72.7161;VDB=0.734474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tCc|C847S|1258|LOC_Os06g45170|protein_coding|CODING|LOC_Os06g45170.1|4|1) FN795-S.SNP.6:27313528 chr06:027313528 0 W/27313528-27313528 FN795-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g45170 retrotransposon protein, putative, unclassified, expressed SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2255-S.SNP.6:27315131 chr06:027315131 0 W/27315131-27315131 FN2255-S SNP C -> T AC=1;AN=190;BQB=0.979617;DP=4977;DP4=2296,2468,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.36185e-12;MQSB=0.520158;RPB=0.632328;SGB=76.4186;VDB=0.173269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.6:27315132 chr06:027315132 0 W/27315132-27315132 FN2255-S SNP T -> C AC=1;AN=190;BQB=0.317189;DP=4990;DP4=2272,2454,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.75504e-12;MQSB=0.503933;RPB=0.669312;SGB=36.4291;VDB=0.0821525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.6:27331790 chr06:027331790 0 W/27331790-27331790 FN1301-S Single Base Substitution C-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN721-S.SNP.6:27351194 chr06:027351194 0 W/27351194-27351194 FN721-S Single Base Substitution C-A INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3711-S.SNP.6:27356120 chr06:027356120 0 W/27356120-27356120 FN3711-S SNP G -> T AC=1;AN=190;BQB=0.936833;DP=2157;DP4=899,1057,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.0407974;MQB=0.834668;MQSB=2.61072e-17;RPB=0.99343;SGB=21.8853;VDB=0.628185;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R1940|2027|LOC_Os06g45270|protein_coding|CODING|LOC_Os06g45270.1|2|1) FN3729-S.SNP.6:27357754 chr06:027357754 0 W/27357754-27357754 FN3729-S SNP G -> A AC=2;AN=190;BQB=0.867515;DP=2649;DP4=1183,1382,9,17;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0200076;MQB=0.423252;MQSB=0.00327351;RPB=0.993735;SGB=112.85;VDB=0.113056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1396C|2027|LOC_Os06g45270|protein_coding|CODING|LOC_Os06g45270.1|2|1) FN1520-S.SNP.6:27358364 chr06:027358364 0 W/27358364-27358364 FN1520-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3448-S.SNP.6:27358460 chr06:027358460 0 W/27358460-27358460 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.857296;DP=4152;DP4=1972,2103,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0753854;MQB=0.172751;MQSB=0;RPB=0.66543;SGB=39.2697;VDB=0.803469;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1160|2027|LOC_Os06g45270|protein_coding|CODING|LOC_Os06g45270.1|2|1) FN2597-S.SNP.6:27361518 chr06:027361518 0 W/27361518-27361518 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.612522;DP=3713;DP4=1681,1760,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.267439;MQB=0.914741;MQSB=0.000368854;RPB=0.632779;SGB=21.559;VDB=0.0481695;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S165L|2027|LOC_Os06g45270|protein_coding|CODING|LOC_Os06g45270.1|1|1) FN1009-S.SNP.6:27363484 chr06:027363484 0 W/27363484-27363484 FN1009-S Single Base Substitution T-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN_N1-119-1.SNP.6:27366112 chr06:027366112 0 W/27366112-27366112 FN_N1-119-1 Single Base Substitution A-G HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2240-S.SNP.6:27369056 chr06:027369056 0 W/27369056-27369056 FN2240-S SNP C -> T AC=1;AN=190;BQB=0.996825;DP=4499;DP4=1881,2287,16,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.12763e-14;MQSB=0.807067;RPB=0.84348;SGB=44.0907;VDB=0.21694;EFF=UTR_5_PRIME(MODIFIER||197||469|LOC_Os06g45280|protein_coding|CODING|LOC_Os06g45280.1|1|1) FN2240-S.SNP.6:27369057 chr06:027369057 0 W/27369057-27369057 FN2240-S SNP G -> T AC=1;AN=190;BQB=0.957307;DP=4515;DP4=1845,2255,15,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9228e-12;MQSB=0.830632;RPB=0.779043;SGB=68.0854;VDB=0.159131;EFF=UTR_5_PRIME(MODIFIER||198||469|LOC_Os06g45280|protein_coding|CODING|LOC_Os06g45280.1|1|1) FN3862-S.SNP.6:27379918 chr06:027379918 0 W/27379918-27379918 FN3862-S SNP G -> A AC=1;AN=158;BQB=0.794572;DP=2238;DP4=1168,1003,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.58443e-05;MQSB=0.638285;RPB=0.974207;SGB=42.6978;VDB=0.641962;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.6:27380575 chr06:027380575 0 W/27380575-27380575 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.998318;DP=3030;DP4=1214,1658,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.99086e-07;MQSB=0.972834;RPB=0.528255;SGB=15.7097;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.6:27383114 chr06:027383114 0 W/27383114-27383114 FN1652-S Single Base Substitution G-T INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2390.SNP.6:27387166 chr06:027387166 0 W/27387166-27387166 FN2390 SNP T -> C AC=2;AN=200;BQB=0.964108;DP=5322;DP4=2411,2688,19,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.64511e-25;MQSB=0.990038;RPB=0.999937;SGB=192.42;VDB=0.812577;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.6:27387345 chr06:027387345 0 W/27387345-27387345 FN1755-S SNP A -> C AC=2;AN=188;BQB=0.816048;DP=3476;DP4=1948,1476,25,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.69383e-26;MQSB=0.955829;RPB=0.956519;SGB=138.74;VDB=0.305533;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.6:27388654 chr06:027388654 0 W/27388654-27388654 FN784-S Single Base Substitution T-A INTRON HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3486-S.SNP.6:27397280 chr06:027397280 0 W/27397280-27397280 FN3486-S SNP A -> T AC=1;AN=184;BQB=0.829377;DP=2517;DP4=1243,1168,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59582e-06;MQSB=0.989299;RPB=0.137712;SGB=44.2207;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.6:27400655 chr06:027400655 0 W/27400655-27400655 FN1434-S Single Base Substitution A-T INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN_812-4-1.SNP.6:27404381 chr06:027404381 0 W/27404381-27404381 FN_812-4-1 Single Base Substitution A-G HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1625-S.SNP.6:27404425 chr06:027404425 0 W/27404425-27404425 FN1625-S Single Base Substitution A-C INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.6:27404425 chr06:027404425 0 W/27404425-27404425 FN1626-S SNP A -> C AC=1;AN=188;BQB=0.0262954;DP=4385;DP4=1887,2429,19,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.76105e-08;MQSB=0.99836;RPB=0.920392;SGB=-294.356;VDB=0.287954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3330-S.SNP.6:27418695 chr06:027418695 0 W/27418695-27418695 FN3330-S SNP T -> G AC=1;AN=184;BQB=0.665059;DP=2897;DP4=1463,1304,2,10;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=5.08939e-06;MQSB=0.000323169;RPB=0.716014;SGB=48.7425;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.6:27427199 chr06:027427199 0 W/27427199-27427199 W426-1-1 Single Base Substitution A-T INTRON HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN2403.SNP.6:27430596 chr06:027430596 0 W/27430596-27430596 FN2403 SNP T -> A AC=1;AN=200;BQB=0.916587;DP=4415;DP4=1993,1989,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000226501;MQB=5.5029e-07;MQSB=0.750535;RPB=0.935043;SGB=-12.5051;VDB=0.544441;EFF=INTRON(MODIFIER||||401|LOC_Os06g45370|protein_coding|CODING|LOC_Os06g45370.1|1|1) FN3637-S.SNP.6:27436629 chr06:027436629 0 W/27436629-27436629 FN3637-S SNP C -> T AC=1;AN=190;BQB=0.974538;DP=2388;DP4=842,1386,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000249771;MQSB=0.463183;RPB=0.843498;SGB=30.8803;VDB=0.49286;EFF=INTRON(MODIFIER||||637|LOC_Os06g45380|protein_coding|CODING|LOC_Os06g45380.1|2|1),INTRON(MODIFIER||||500|LOC_Os06g45380|protein_coding|CODING|LOC_Os06g45380.2|1|1) FN3391-S.SNP.6:27446821 chr06:027446821 0 W/27446821-27446821 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.905489;DP=2965;DP4=1283,1464,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.10526e-06;MQSB=0.713993;RPB=0.251304;SGB=21.6609;VDB=0.340487;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.6:27449888 chr06:027449888 0 W/27449888-27449888 FN323-S Single Base Substitution C-A INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1080-S.SNP.6:27451654 chr06:027451654 0 W/27451654-27451654 FN1080-S Single Base Substitution C-A INTERGENIC HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1080-S.SNP.6:27451655 chr06:027451655 0 W/27451655-27451655 FN1080-S Single Base Substitution C-A INTERGENIC HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN568-S.SNP.6:27452834 chr06:027452834 0 W/27452834-27452834 FN568-S Single Base Substitution C-T INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1237-S.SNP.6:27456796 chr06:027456796 0 W/27456796-27456796 FN1237-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2279-S.SNP.6:27465124 chr06:027465124 0 W/27465124-27465124 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.91077;DP=5237;DP4=2389,2478,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72858e-07;MQSB=0.910011;RPB=0.946554;SGB=62.7569;VDB=0.797064;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.6:27465987 chr06:027465987 0 W/27465987-27465987 FN3850-S SNP A -> T AC=1;AN=158;BQB=0.935744;DP=2293;DP4=1052,1157,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.19953e-05;MQSB=0.93057;RPB=0.207729;SGB=13.8578;VDB=0.166446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.6:27490856 chr06:027490856 0 W/27490856-27490856 FN1060-S Single Base Substitution A-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2397.SNP.6:27494796 chr06:027494796 0 W/27494796-27494796 FN2397 SNP A -> T AC=2;AN=200;BQB=0.642907;DP=4941;DP4=2337,2273,19,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07493e-17;MQSB=0.981608;RPB=0.86252;SGB=41.5933;VDB=0.508401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.6:27500219 chr06:027500219 0 W/27500219-27500219 FN3522-S SNP G -> C AC=1;AN=188;BQB=0.998943;DP=3095;DP4=1476,1569,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.78615e-06;MQSB=0.997257;RPB=0.896218;SGB=35.3493;VDB=0.349492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.6:27501653 chr06:027501653 0 W/27501653-27501653 FN3943-S SNP T -> C AC=1;AN=168;BQB=0.819603;DP=2610;DP4=1347,1002,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.59549e-11;MQSB=0.88873;RPB=0.975048;SGB=12.7756;VDB=0.975644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.6:27508004 chr06:027508004 0 W/27508004-27508004 FN2282 SNP T -> A AC=1;AN=192;BQB=0.962296;DP=5288;DP4=2739,2326,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.05976e-22;MQSB=0.893208;RPB=0.373717;SGB=82.7652;VDB=0.0496526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.6:27508006 chr06:027508006 0 W/27508006-27508006 FN2282 SNP T -> A AC=1;AN=192;BQB=0.881115;DP=5261;DP4=2681,2276,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.2243e-22;MQSB=0.981413;RPB=0.503444;SGB=40.2061;VDB=0.0526505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.6:27509436 chr06:027509436 0 W/27509436-27509436 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.97835;DP=2635;DP4=1221,1339,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.25574e-07;MQSB=0.958468;RPB=0.0756581;SGB=39.9877;VDB=0.0823973;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.6:27513899 chr06:027513899 0 W/27513899-27513899 FN4089-S SNP C -> T AC=2;AN=182;BQB=0.938383;DP=3260;DP4=1683,1459,14,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.60383e-17;MQSB=0.865613;RPB=0.994232;SGB=129.818;VDB=0.639787;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.6:27525095 chr06:027525095 0 W/27525095-27525095 FN-61 Single Base Substitution C-T INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN4032-S.SNP.6:27525789 chr06:027525789 0 W/27525789-27525789 FN4032-S SNP A -> C AC=1;AN=168;BQB=0.764228;DP=2706;DP4=1313,1279,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.0748e-08;MQSB=0.999842;RPB=0.819002;SGB=78.7577;VDB=0.110343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.6:27526169 chr06:027526169 0 W/27526169-27526169 FN3354-S SNP A -> G AC=1;AN=184;BQB=0.791775;DP=3290;DP4=1671,1383,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.27324e-07;MQSB=0.759764;RPB=0.987214;SGB=44.2207;VDB=0.626886;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.6:27533243 chr06:027533243 0 W/27533243-27533243 FN1284-S Single Base Substitution A-C INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3301-S.SNP.6:27535646 chr06:027535646 0 W/27535646-27535646 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.97913;DP=6476;DP4=3001,3337,18,13;HOB=5.90737e-05;ICB=0.00011879;MQ=17;MQ0F=0.419086;MQB=0.0029026;MQSB=1.32255e-41;RPB=0.807155;SGB=63.6237;VDB=0.812979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E214K|2013|LOC_Os06g45520|protein_coding|CODING|LOC_Os06g45520.1|1|1) FN3528-S.SNP.6:27535646 chr06:027535646 0 W/27535646-27535646 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.967421;DP=6399;DP4=2879,3412,21,21;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.419284;MQB=7.98105e-05;MQSB=0;RPB=0.917908;SGB=185.278;VDB=0.696927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E214K|2013|LOC_Os06g45520|protein_coding|CODING|LOC_Os06g45520.1|1|1) FN4098-S.SNP.6:27535646 chr06:027535646 0 W/27535646-27535646 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.528655;DP=6615;DP4=3207,3320,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=13;MQ0F=0.530159;MQB=0.114849;MQSB=0.996791;RPB=0.829738;SGB=62.1548;VDB=0.554145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E214K|2013|LOC_Os06g45520|protein_coding|CODING|LOC_Os06g45520.1|1|1) FN4164-S.SNP.6:27535646 chr06:027535646 0 W/27535646-27535646 FN4164-S SNP G -> A AC=1;AN=170;BQB=0.816539;DP=5185;DP4=2482,2605,14,12;HOB=6.92042e-05;ICB=0.000139222;MQ=14;MQ0F=0.503568;MQB=7.92887e-05;MQSB=0.00653844;RPB=0.0154555;SGB=110.069;VDB=0.609785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E214K|2013|LOC_Os06g45520|protein_coding|CODING|LOC_Os06g45520.1|1|1) FN2627-S.SNP.6:27538509 chr06:027538509 0 W/27538509-27538509 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.887094;DP=4687;DP4=2289,2132,9,4;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0552592;MQB=0.50947;MQSB=0;RPB=0.858949;SGB=36.6644;VDB=0.266244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G1149D|2013|LOC_Os06g45520|protein_coding|CODING|LOC_Os06g45520.1|2|1) FN3938-S.SNP.6:27544066 chr06:027544066 0 W/27544066-27544066 FN3938-S SNP C -> T AC=2;AN=158;BQB=0.938946;DP=2879;DP4=1272,1485,18,12;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.0145884;MQB=6.00264e-09;MQSB=2.98829e-06;RPB=0.0693036;SGB=91.3541;VDB=0.69864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G82R|803|LOC_Os06g45530|protein_coding|CODING|LOC_Os06g45530.1|1|1) FN1492-S.SNP.6:27545017 chr06:027545017 0 W/27545017-27545017 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1702-S.SNP.6:27545017 chr06:027545017 0 W/27545017-27545017 FN1702-S SNP C -> T AC=1;AN=188;BQB=0.0268093;DP=3287;DP4=1141,2106,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0608458;MQB=0.266976;MQSB=1.74918e-07;RPB=0.369096;SGB=-61.9025;VDB=0.732089;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.6:27545017 chr06:027545017 0 W/27545017-27545017 FN4189-S SNP C -> T AC=2;AN=170;BQB=0.796135;DP=2979;DP4=1237,1652,8,13;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0151057;MQB=8.67424e-06;MQSB=7.8019e-10;RPB=0.607529;SGB=87.856;VDB=0.797659;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.6:27552763 chr06:027552763 0 W/27552763-27552763 W360-2S-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2622-S.SNP.6:27558184 chr06:027558184 0 W/27558184-27558184 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.927524;DP=4587;DP4=2223,2175,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15508e-14;MQSB=0.993519;RPB=0.491873;SGB=91.1059;VDB=0.259153;EFF=INTRON(MODIFIER||||261|LOC_Os06g45540|protein_coding|CODING|LOC_Os06g45540.1|1|1) FN2622-S.SNP.6:27558185 chr06:027558185 0 W/27558185-27558185 FN2622-S SNP C -> T AC=1;AN=200;BQB=0.94401;DP=4589;DP4=2255,2100,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.14565e-15;MQSB=0.966295;RPB=0.324601;SGB=95.7111;VDB=0.24087;EFF=INTRON(MODIFIER||||261|LOC_Os06g45540|protein_coding|CODING|LOC_Os06g45540.1|1|1) FN2622-S.SNP.6:27558186 chr06:027558186 0 W/27558186-27558186 FN2622-S SNP A -> T AC=1;AN=200;BQB=0.629995;DP=4587;DP4=2228,2182,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28778e-15;MQSB=0.982388;RPB=0.231317;SGB=69.1109;VDB=0.280929;EFF=INTRON(MODIFIER||||261|LOC_Os06g45540|protein_coding|CODING|LOC_Os06g45540.1|1|1) FN2196-S.SNP.6:27560137 chr06:027560137 0 W/27560137-27560137 FN2196-S SNP T -> C AC=2;AN=190;BQB=0.240505;DP=4920;DP4=2526,2058,32,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.746e-34;MQSB=0.829073;RPB=0.903636;SGB=272.235;VDB=0.244035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y84H|261|LOC_Os06g45540|protein_coding|CODING|LOC_Os06g45540.1|3|1) FN3824-S.SNP.6:27566801 chr06:027566801 0 W/27566801-27566801 FN3824-S SNP G -> T AC=1;AN=190;BQB=0.859705;DP=2876;DP4=1384,1362,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.42474e-09;MQSB=0.977861;RPB=0.818079;SGB=50.3161;VDB=0.0767181;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.6:27570998 chr06:027570998 0 W/27570998-27570998 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.997071;DP=2587;DP4=1402,1094,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.02676e-12;MQSB=0.999946;RPB=0.25166;SGB=87.856;VDB=0.475054;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.6:27574525 chr06:027574525 0 W/27574525-27574525 FN952-S Single Base Substitution T-A INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-278.SNP.6:27584608 chr06:027584608 0 W/27584608-27584608 FN-278 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g45560 retrotransposon protein, putative, unclassified, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3763-S.SNP.6:27584850 chr06:027584850 0 W/27584850-27584850 FN3763-S SNP G -> A AC=1;AN=190;BQB=0.775372;DP=3073;DP4=1310,1682,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.00395e-10;MQSB=0.990277;RPB=0.718968;SGB=80.9724;VDB=0.497758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D306N|1745|LOC_Os06g45560|protein_coding|CODING|LOC_Os06g45560.1|1|1) FN1529-S.SNP.6:27585612 chr06:027585612 0 W/27585612-27585612 FN1529-S Single Base Substitution G-A SPLICE_SITE_REGION Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN534-S.SNP.6:27586620 chr06:027586620 0 W/27586620-27586620 FN534-S Single Base Substitution T-C INTRON HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3940-S.SNP.6:27588818 chr06:027588818 0 W/27588818-27588818 FN3940-S SNP G -> A AC=2;AN=158;BQB=0.96502;DP=2928;DP4=1470,1351,21,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.78595e-17;MQSB=0.995474;RPB=0.66453;SGB=104.832;VDB=0.939693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1379Q|1745|LOC_Os06g45560|protein_coding|CODING|LOC_Os06g45560.1|7|1) FN-315.SNP.6:27589237 chr06:027589237 0 W/27589237-27589237 FN-315 Single Base Substitution G-A INTRON HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2253-S.SNP.6:27592610 chr06:027592610 0 W/27592610-27592610 FN2253-S SNP G -> C AC=1;AN=190;BQB=0.602877;DP=5217;DP4=2324,2479,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000191681;MQB=4.71004e-05;MQSB=0.765236;RPB=0.630068;SGB=13.4442;VDB=0.0165932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.6:27594905 chr06:027594905 0 W/27594905-27594905 FN3545-S SNP G -> A AC=2;AN=188;BQB=0.54763;DP=3330;DP4=1303,1948,12,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.0669e-13;MQSB=0.996626;RPB=0.955416;SGB=139.845;VDB=0.8685;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V78|213|LOC_Os06g45570|protein_coding|CODING|LOC_Os06g45570.1|1|1) FN1549-S.SNP.6:27599958 chr06:027599958 0 W/27599958-27599958 FN1549-S Single Base Substitution C-T INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN-13.SNP.6:27600249 chr06:027600249 0 W/27600249-27600249 FN-13 Single Base Substitution T-C INTERGENIC HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.6:27600249 chr06:027600249 0 W/27600249-27600249 FN-13 Single Base Substitution T-C INTERGENIC Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1553-S.SNP.6:27601389 chr06:027601389 0 W/27601389-27601389 FN1553-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2146-S.SNP.6:27602013 chr06:027602013 0 W/27602013-27602013 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.61839;DP=3983;DP4=1810,2129,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.02989e-12;MQSB=0.990383;RPB=0.0842557;SGB=-110.908;VDB=0.0824404;EFF=INTRON(MODIFIER||||415|LOC_Os06g45590|protein_coding|CODING|LOC_Os06g45590.1|11|1) FN2794-S.SNP.6:27603628 chr06:027603628 0 W/27603628-27603628 FN2794-S SNP T -> A AC=2;AN=198;BQB=0.83664;DP=4147;DP4=2003,1629,29,34;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.18764e-27;MQSB=0.757854;RPB=0.95333;SGB=97.9197;VDB=0.562807;EFF=INTRON(MODIFIER||||415|LOC_Os06g45590|protein_coding|CODING|LOC_Os06g45590.1|5|1) FN-134.SNP.6:27607057 chr06:027607057 0 W/27607057-27607057 FN-134 Single Base Substitution A-C INTERGENIC HOMO SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2142-S.SNP.6:27607057 chr06:027607057 0 W/27607057-27607057 FN2142-S SNP A -> C AC=2;AN=168;BQB=0.119514;DP=3815;DP4=1582,2146,18,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.12798e-22;MQSB=0.997246;RPB=0.87314;SGB=-3.74047;VDB=0.966207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.6:27607436 chr06:027607436 0 W/27607436-27607436 FN1420-S Single Base Substitution T-C INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2553-S.SNP.6:27625799 chr06:027625799 0 W/27625799-27625799 FN2553-S SNP C -> A AC=1;AN=198;BQB=0.468488;DP=4223;DP4=2137,1827,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.56309e-05;MQSB=0.947401;RPB=0.732701;SGB=49.5489;VDB=0.977732;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L991M|1061|LOC_Os06g45630|protein_coding|CODING|LOC_Os06g45630.1|1|1) FN2442.SNP.6:27627678 chr06:027627678 0 W/27627678-27627678 FN2442 SNP C -> A AC=1;AN=200;BQB=0.991059;DP=4655;DP4=2216,2125,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.15747e-09;MQSB=0.960524;RPB=0.998056;SGB=40.2696;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.6:27631474 chr06:027631474 0 W/27631474-27631474 FN2373 SNP A -> C AC=2;AN=192;BQB=0.21465;DP=5292;DP4=2576,2196,28,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78375e-30;MQSB=0.956526;RPB=0.52941;SGB=118.666;VDB=0.911183;EFF=INTRON(MODIFIER||||250|LOC_Os06g45640|protein_coding|CODING|LOC_Os06g45640.1|1|1) FN1382-S.SNP.6:27643516 chr06:027643516 0 W/27643516-27643516 FN1382-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-212.SNP.6:27649734 chr06:027649734 0 W/27649734-27649734 FN-212 Single Base Substitution T-C INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3909-S.SNP.6:27650393 chr06:027650393 0 W/27650393-27650393 FN3909-S SNP T -> C AC=2;AN=158;BQB=0.886823;DP=2403;DP4=1165,1154,17,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.37985e-15;MQSB=0.999911;RPB=0.747476;SGB=116.978;VDB=0.522234;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.6:27655259 chr06:027655259 0 W/27655259-27655259 FN927-S Single Base Substitution G-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2742-S.SNP.6:27666466 chr06:027666466 0 W/27666466-27666466 FN2742-S SNP G -> T AC=2;AN=200;BQB=0.176314;DP=4934;DP4=2475,2238,22,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000202675;MQB=3.07606e-21;MQSB=0.974528;RPB=0.717802;SGB=160.183;VDB=0.35925;EFF=START_GAINED(LOW||||1291|LOC_Os06g45690|protein_coding|CODING|LOC_Os06g45690.1|1|1),UTR_5_PRIME(MODIFIER||166||1291|LOC_Os06g45690|protein_coding|CODING|LOC_Os06g45690.1|1|1) FN1313-S.SNP.6:27667190 chr06:027667190 0 W/27667190-27667190 FN1313-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os06g45690 symbiosis-related disease resistance protein, putative, expressed SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1278-S.SNP.6:27669943 chr06:027669943 0 W/27669943-27669943 FN1278-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN4122-S.SNP.6:27670172 chr06:027670172 0 W/27670172-27670172 FN4122-S SNP G -> T AC=2;AN=182;BQB=0.772132;DP=2857;DP4=1374,1404,18,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000350018;MQB=2.0577e-18;MQSB=0.999683;RPB=0.888169;SGB=152.372;VDB=0.743828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V1181L|1291|LOC_Os06g45690|protein_coding|CODING|LOC_Os06g45690.1|1|1) W470-2-1.SNP.6:27682383 chr06:027682383 0 W/27682383-27682383 W470-2-1 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2692-S.SNP.6:27686117 chr06:027686117 0 W/27686117-27686117 FN2692-S SNP C -> T AC=1;AN=200;BQB=0.0813869;DP=5379;DP4=2572,2527,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65809e-10;MQSB=0.973068;RPB=0.990467;SGB=-11.8999;VDB=0.354443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.6:27690956 chr06:027690956 0 W/27690956-27690956 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.998957;DP=3126;DP4=1555,1431,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.65959e-10;MQSB=0.884445;RPB=0.3151;SGB=67.3108;VDB=0.824631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G159R|885|LOC_Os06g45750|protein_coding|CODING|LOC_Os06g45750.1|1|1) FN2602-S.SNP.6:27692986 chr06:027692986 0 W/27692986-27692986 FN2602-S SNP A -> T AC=1;AN=198;BQB=0.353395;DP=4116;DP4=2041,1829,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.89606e-09;MQSB=0.974953;RPB=0.629204;SGB=6.15916;VDB=0.194707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T802S|885|LOC_Os06g45750|protein_coding|CODING|LOC_Os06g45750.1|2|1) FN2477.SNP.6:27697596 chr06:027697596 0 W/27697596-27697596 FN2477 SNP G -> A AC=2;AN=200;BQB=0.625971;DP=4838;DP4=2220,2385,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.24912e-26;MQSB=0.526645;RPB=0.960666;SGB=215.445;VDB=0.979512;EFF=INTRON(MODIFIER||||482|LOC_Os06g45760|protein_coding|CODING|LOC_Os06g45760.1|1|1) FN758-S.SNP.6:27702610 chr06:027702610 0 W/27702610-27702610 FN758-S Single Base Substitution C-A INTRON HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2476.SNP.6:27707126 chr06:027707126 0 W/27707126-27707126 FN2476 SNP G -> T AC=1;AN=200;BQB=0.199048;DP=4326;DP4=2017,2044,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06143e-08;MQSB=0.893433;RPB=0.674165;SGB=-35.7104;VDB=0.92936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.6:27707127 chr06:027707127 0 W/27707127-27707127 FN2476 SNP A -> T AC=1;AN=200;BQB=0.70096;DP=4334;DP4=2009,2001,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.96167e-08;MQSB=0.861229;RPB=0.75367;SGB=40.2696;VDB=0.804154;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.6:27712182 chr06:027712182 0 W/27712182-27712182 FN-66 Single Base Substitution T-G INTRON HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2373.SNP.6:27730769 chr06:027730769 0 W/27730769-27730769 FN2373 SNP T -> A AC=2;AN=192;BQB=0.273135;DP=5572;DP4=2609,2544,40,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.7025e-35;MQSB=0.97277;RPB=0.953334;SGB=-205.536;VDB=0.505908;EFF=INTRON(MODIFIER||||825|LOC_Os06g45830|protein_coding|CODING|LOC_Os06g45830.1|7|1) FN2729-S.SNP.6:27733178 chr06:027733178 0 W/27733178-27733178 FN2729-S SNP A -> T AC=1;AN=200;BQB=0.409654;DP=5185;DP4=2623,2343,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.40919e-10;MQSB=0.991871;RPB=0.927157;SGB=29.4849;VDB=0.0857641;EFF=INTRON(MODIFIER||||825|LOC_Os06g45830|protein_coding|CODING|LOC_Os06g45830.1|1|1) FN-169.SNP.6:27735479 chr06:027735479 0 W/27735479-27735479 FN-169 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g45840 MYB transcription factor, putative, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3681-S.SNP.6:27739214 chr06:027739214 0 W/27739214-27739214 FN3681-S SNP C -> G AC=1;AN=190;BQB=0.956568;DP=2766;DP4=1263,1412,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.39019e-11;MQSB=0.991088;RPB=0.497667;SGB=71.8647;VDB=0.57833;EFF=INTRON(MODIFIER||||343|LOC_Os06g45840|protein_coding|CODING|LOC_Os06g45840.1|1|1),INTRON(MODIFIER||||341|LOC_Os06g45840|protein_coding|CODING|LOC_Os06g45840.2|1|1) FN3479-S.SNP.6:27744153 chr06:027744153 0 W/27744153-27744153 FN3479-S SNP A -> T AC=2;AN=184;BQB=0.589085;DP=2507;DP4=1089,1321,11,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31131e-07;MQSB=0.997003;RPB=0.47987;SGB=49.835;VDB=0.459648;EFF=INTRON(MODIFIER||||227|LOC_Os06g45850|protein_coding|CODING|LOC_Os06g45850.2|1|1),INTRON(MODIFIER||||283|LOC_Os06g45850|protein_coding|CODING|LOC_Os06g45850.1|1|1),INTRON(MODIFIER||||175|LOC_Os06g45850|protein_coding|CODING|LOC_Os06g45850.3|1|1),INTRON(MODIFIER||||227|LOC_Os06g45850|protein_coding|CODING|LOC_Os06g45850.4|1|1),INTRON(MODIFIER||||227|LOC_Os06g45850|protein_coding|CODING|LOC_Os06g45850.5|1|1) FN3885-S.SNP.6:27762771 chr06:027762771 0 W/27762771-27762771 FN3885-S SNP G -> T AC=1;AN=158;BQB=0.895826;DP=2532;DP4=1293,1114,15,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33488e-12;MQSB=0.889546;RPB=0.248745;SGB=38.0354;VDB=0.0342791;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.6:27763989 chr06:027763989 0 W/27763989-27763989 FN4132-S SNP G -> C AC=1;AN=182;BQB=0.999858;DP=3398;DP4=1503,1823,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.13868e-08;MQSB=0.947432;RPB=0.998924;SGB=53.1331;VDB=0.861364;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.6:27766278 chr06:027766278 0 W/27766278-27766278 FN-120 Single Base Substitution A-G INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN835-S.SNP.6:27766479 chr06:027766479 0 W/27766479-27766479 FN835-S Single Base Substitution A-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN3940-S.SNP.6:27774902 chr06:027774902 0 W/27774902-27774902 FN3940-S SNP T -> G AC=2;AN=158;BQB=0.647945;DP=2740;DP4=1227,1375,10,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.38554e-15;MQSB=0.946375;RPB=0.97431;SGB=94.7235;VDB=0.585949;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgT/tgG|C1202W|1587|LOC_Os06g45880|protein_coding|CODING|LOC_Os06g45880.1|1|1) FN2246-S.SNP.6:27791989 chr06:027791989 0 W/27791989-27791989 FN2246-S SNP G -> A AC=2;AN=190;BQB=0.977517;DP=4301;DP4=1829,2216,10,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.73179e-19;MQSB=0.461238;RPB=0.727425;SGB=107.178;VDB=0.385224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.6:27795046 chr06:027795046 0 W/27795046-27795046 FN2230-S SNP T -> C AC=2;AN=190;BQB=0.304911;DP=4763;DP4=2034,2356,23,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.93912e-33;MQSB=0.582661;RPB=0.999609;SGB=192.471;VDB=0.143058;EFF=INTRON(MODIFIER||||564|LOC_Os06g45910|protein_coding|CODING|LOC_Os06g45910.1|8|1) FN2326.SNP.6:27796427 chr06:027796427 0 W/27796427-27796427 FN2326 SNP G -> T AC=1;AN=192;BQB=0.596215;DP=5032;DP4=2322,2272,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.75462e-09;MQSB=0.283651;RPB=0.310715;SGB=54.0374;VDB=0.288302;EFF=INTRON(MODIFIER||||564|LOC_Os06g45910|protein_coding|CODING|LOC_Os06g45910.1|12|1) FN2326.SNP.6:27796428 chr06:027796428 0 W/27796428-27796428 FN2326 SNP C -> T AC=1;AN=192;BQB=0.929724;DP=5023;DP4=2378,2280,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.82984e-08;MQSB=0.382955;RPB=0.329248;SGB=-38.813;VDB=0.246241;EFF=INTRON(MODIFIER||||564|LOC_Os06g45910|protein_coding|CODING|LOC_Os06g45910.1|12|1) FN2126-S.SNP.6:27800307 chr06:027800307 0 W/27800307-27800307 FN2126-S SNP C -> T AC=1;AN=168;BQB=0.498942;DP=4114;DP4=2086,1979,13,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29893e-13;MQSB=0.998725;RPB=0.890614;SGB=-44.6276;VDB=0.165438;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.6:27802818 chr06:027802818 0 W/27802818-27802818 FN943-S Single Base Substitution C-G INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN574-S.SNP.6:27804593 chr06:027804593 0 W/27804593-27804593 FN574-S Single Base Substitution G-A INTERGENIC HOMO SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN999-S.SNP.6:27808661 chr06:027808661 0 W/27808661-27808661 FN999-S Single Base Substitution A-G INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2300.SNP.6:27812700 chr06:027812700 0 W/27812700-27812700 FN2300 SNP C -> T AC=1;AN=192;BQB=0.98069;DP=4556;DP4=2263,2026,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000219491;MQB=3.8135e-08;MQSB=0.598346;RPB=0.974118;SGB=36.2157;VDB=0.802645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.6:27824822 chr06:027824822 0 W/27824822-27824822 FN1512-S Single Base Substitution A-G INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3592-S.SNP.6:27829185 chr06:027829185 0 W/27829185-27829185 FN3592-S SNP G -> T AC=1;AN=188;BQB=0.999976;DP=2605;DP4=1117,1412,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.45785e-09;MQSB=0.883249;RPB=0.996264;SGB=67.1521;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.6:27836106 chr06:027836106 0 W/27836106-27836106 FN418-S Single Base Substitution G-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2105-S.SNP.6:27837305 chr06:027837305 0 W/27837305-27837305 FN2105-S SNP A -> T AC=1;AN=168;BQB=0.591527;DP=4367;DP4=2450,1877,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.21067e-06;MQSB=0.962558;RPB=0.486567;SGB=-37.7974;VDB=0.535649;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.6:27846704 chr06:027846704 0 W/27846704-27846704 FN740-S Single Base Substitution G-A INTRON HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2438.SNP.6:27850710 chr06:027850710 0 W/27850710-27850710 FN2438 SNP G -> A AC=1;AN=200;BQB=0.945703;DP=4806;DP4=2518,1801,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.63519e-07;MQSB=0.433546;RPB=0.781136;SGB=39.9056;VDB=0.948027;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.6:27857180 chr06:027857180 0 W/27857180-27857180 FN1330-S Single Base Substitution T-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1606-S.SNP.6:27865070 chr06:027865070 0 W/27865070-27865070 FN1606-S Single Base Substitution C-G INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1606-S.SNP.6:27865071 chr06:027865071 0 W/27865071-27865071 FN1606-S Single Base Substitution C-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2589-S.SNP.6:27881313 chr06:027881313 0 W/27881313-27881313 FN2589-S SNP A -> G AC=1;AN=198;BQB=0.474279;DP=4603;DP4=2349,1970,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33483e-09;MQSB=0.999574;RPB=0.299324;SGB=63.3342;VDB=0.0885925;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.6:27882475 chr06:027882475 0 W/27882475-27882475 FN545-S Single Base Substitution G-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN936-S.SNP.6:27886826 chr06:027886826 0 W/27886826-27886826 FN936-S Single Base Substitution G-C INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2285.SNP.6:27893113 chr06:027893113 0 W/27893113-27893113 FN2285 SNP A -> G AC=1;AN=192;BQB=0.99137;DP=4961;DP4=2666,1886,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.85275e-15;MQSB=0.848719;RPB=0.99985;SGB=-68.8078;VDB=0.0696405;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.6:27894913 chr06:027894913 0 W/27894913-27894913 FN-70 Single Base Substitution A-G INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN3398-S.SNP.6:27896213 chr06:027896213 0 W/27896213-27896213 FN3398-S SNP G -> A AC=2;AN=184;BQB=0.54899;DP=3066;DP4=1063,1889,8,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47404e-12;MQSB=0.858395;RPB=0.410423;SGB=56.0583;VDB=0.161891;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.6:27897492 chr06:027897492 0 W/27897492-27897492 FN-89 Single Base Substitution G-C INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2155-S.SNP.6:27898740 chr06:027898740 0 W/27898740-27898740 FN2155-S SNP A -> T AC=1;AN=168;BQB=0.217246;DP=3358;DP4=1745,1573,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.87978e-08;MQSB=0.974843;RPB=0.640116;SGB=-38.3665;VDB=0.789269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.6:27899093 chr06:027899093 0 W/27899093-27899093 FN2676-S SNP T -> C AC=2;AN=200;BQB=0.999881;DP=5026;DP4=2408,2395,30,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.19763e-28;MQSB=0.847324;RPB=0.779373;SGB=170.056;VDB=0.661142;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.6:27901705 chr06:027901705 0 W/27901705-27901705 FN794-S Single Base Substitution T-C INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN794-S.SNP.6:27901706 chr06:027901706 0 W/27901706-27901706 FN794-S Single Base Substitution C-T INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN2595-S.SNP.6:27907485 chr06:027907485 0 W/27907485-27907485 FN2595-S SNP A -> C AC=2;AN=198;BQB=0.996506;DP=4103;DP4=1815,2026,24,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.94988e-25;MQSB=0.812015;RPB=0.980114;SGB=205.783;VDB=0.895386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3561-S.SNP.6:27907587 chr06:027907587 0 W/27907587-27907587 FN3561-S SNP T -> C AC=1;AN=188;BQB=0.868616;DP=2814;DP4=1551,1171,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8158e-09;MQSB=0.810508;RPB=0.985399;SGB=62.6088;VDB=0.471439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.6:27912934 chr06:027912934 0 W/27912934-27912934 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.94575;DP=4087;DP4=1836,1923,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00293614;MQB=3.72844e-07;MQSB=0.413956;RPB=0.70966;SGB=6.15916;VDB=0.48374;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.6:27913900 chr06:027913900 0 W/27913900-27913900 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.986067;DP=3055;DP4=1692,1292,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.65546e-07;MQSB=0.962305;RPB=0.967919;SGB=53.5223;VDB=0.085717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.6:27914865 chr06:027914865 0 W/27914865-27914865 FN3881-S SNP G -> T AC=2;AN=158;BQB=0.945308;DP=3055;DP4=1317,1625,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000327332;MQB=6.61666e-12;MQSB=0.999474;RPB=0.982216;SGB=103.87;VDB=0.522844;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.6:27915645 chr06:027915645 0 W/27915645-27915645 FN267-S Single Base Substitution T-A INTRON HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3916-S.SNP.6:27916476 chr06:027916476 0 W/27916476-27916476 FN3916-S SNP T -> C AC=1;AN=158;BQB=0.850916;DP=2536;DP4=1189,1210,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22321e-08;MQSB=0.602921;RPB=0.975076;SGB=55.806;VDB=0.35717;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.6:27918406 chr06:027918406 0 W/27918406-27918406 FN476-S Single Base Substitution C-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1405-S.SNP.6:27918525 chr06:027918525 0 W/27918525-27918525 FN1405-S Single Base Substitution C-T INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2164-S.SNP.6:27919289 chr06:027919289 0 W/27919289-27919289 FN2164-S SNP A -> C AC=1;AN=168;BQB=0.0768536;DP=3984;DP4=1917,2009,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.01097e-08;MQSB=0.996858;RPB=0.977518;SGB=-44.0584;VDB=0.444265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.6:27922060 chr06:027922060 0 W/27922060-27922060 FN1623-S Single Base Substitution C-G INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2223-S.SNP.6:27926827 chr06:027926827 0 W/27926827-27926827 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.959234;DP=4265;DP4=1980,1918,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000234467;MQB=0.00195591;MQSB=0.0825533;RPB=0.45829;SGB=32.5467;VDB=0.355991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.6:27929379 chr06:027929379 0 W/27929379-27929379 FN2791-S SNP A -> T AC=1;AN=198;BQB=0.478182;DP=4055;DP4=2039,1885,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.38405e-08;MQSB=0.553096;RPB=0.952364;SGB=63.3342;VDB=0.705329;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.6:27929428 chr06:027929428 0 W/27929428-27929428 FN1067-S Single Base Substitution T-A INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1537-S.SNP.6:27933880 chr06:027933880 0 W/27933880-27933880 FN1537-S Single Base Substitution C-T INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1688-S.SNP.6:27935055 chr06:027935055 0 W/27935055-27935055 FN1688-S SNP A -> T AC=1;AN=188;BQB=0.371983;DP=3582;DP4=1951,1596,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.79548e-07;MQSB=0.864242;RPB=0.155509;SGB=-60.4458;VDB=0.240122;EFF=INTRON(MODIFIER||||46|LOC_Os06g46070|protein_coding|CODING|LOC_Os06g46070.1|2|1) FN3516-S.SNP.6:27936476 chr06:027936476 0 W/27936476-27936476 FN3516-S SNP A -> C AC=1;AN=188;BQB=0.811022;DP=3283;DP4=1468,1739,4,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25379e-08;MQSB=0.856896;RPB=0.93296;SGB=50.1574;VDB=0.577545;EFF=INTERGENIC(MODIFIER||||||||||1) FN4185-S.SNP.6:27936692 chr06:027936692 0 W/27936692-27936692 FN4185-S SNP T -> C AC=1;AN=170;BQB=0.99697;DP=2307;DP4=1069,1156,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.96014e-10;MQSB=0.965217;RPB=0.960422;SGB=61.2001;VDB=0.657642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.6:27940488 chr06:027940488 0 W/27940488-27940488 FN1688-S SNP G -> C AC=1;AN=188;BQB=0.00211501;DP=3671;DP4=1800,1827,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69266e-08;MQSB=0.999803;RPB=0.979399;SGB=-98.724;VDB=0.64029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.6:27952779 chr06:027952779 0 W/27952779-27952779 FN3435-S SNP A -> T AC=1;AN=184;BQB=0.986943;DP=2937;DP4=1578,1268,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02697e-11;MQSB=0.979788;RPB=0.58395;SGB=53.3568;VDB=0.281016;EFF=INTERGENIC(MODIFIER||||||||||1) FN3425-S.SNP.6:27955752 chr06:027955752 0 W/27955752-27955752 FN3425-S SNP C -> T AC=2;AN=184;BQB=0.785677;DP=2365;DP4=1256,1024,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.61037e-11;MQSB=0.971413;RPB=0.618096;SGB=93.9603;VDB=0.202948;EFF=INTRON(MODIFIER||||174|LOC_Os06g46120|protein_coding|CODING|LOC_Os06g46120.1|1|1) FN978-S.SNP.6:27955752 chr06:027955752 0 W/27955752-27955752 FN978-S Single Base Substitution C-T INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-172.SNP.6:27956423 chr06:027956423 0 W/27956423-27956423 FN-172 Single Base Substitution T-C INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN3375-S.SNP.6:27956423 chr06:027956423 0 W/27956423-27956423 FN3375-S SNP T -> C AC=2;AN=184;BQB=0.962766;DP=2977;DP4=1558,1221,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.0736e-15;MQSB=0.96126;RPB=0.842813;SGB=88.5747;VDB=0.165311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.6:27961286 chr06:027961286 0 W/27961286-27961286 FN1625-S Single Base Substitution A-T INTRON HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.6:27961286 chr06:027961286 0 W/27961286-27961286 FN1626-S SNP A -> T AC=1;AN=188;BQB=0.0922429;DP=3750;DP4=1859,1845,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.15358e-08;MQSB=0.998453;RPB=0.566507;SGB=-103.637;VDB=0.502285;EFF=INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN1684-S.SNP.6:27963151 chr06:027963151 0 W/27963151-27963151 FN1684-S SNP A -> C AC=2;AN=188;BQB=0.823004;DP=3368;DP4=1325,2015,8,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62141e-11;MQSB=0.929329;RPB=0.673668;SGB=50.1574;VDB=0.982556;EFF=UTR_3_PRIME(MODIFIER||413||114|LOC_Os06g46140|protein_coding|CODING|LOC_Os06g46140.1|1|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN1684-S.SNP.6:27963152 chr06:027963152 0 W/27963152-27963152 FN1684-S SNP G -> T AC=2;AN=188;BQB=0.659831;DP=3345;DP4=1310,2007,8,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.80339e-11;MQSB=0.949255;RPB=0.718019;SGB=33.7061;VDB=0.987448;EFF=UTR_3_PRIME(MODIFIER||412||114|LOC_Os06g46140|protein_coding|CODING|LOC_Os06g46140.1|1|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN1685-S.SNP.6:27964030 chr06:027964030 0 W/27964030-27964030 FN1685-S SNP A -> C AC=1;AN=188;BQB=0.93113;DP=3323;DP4=1854,1416,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.95791e-14;MQSB=0.89177;RPB=0.998456;SGB=67.8739;VDB=0.667834;EFF=UTR_5_PRIME(MODIFIER||122||114|LOC_Os06g46140|protein_coding|CODING|LOC_Os06g46140.1|1|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN2378.SNP.6:27967040 chr06:027967040 0 W/27967040-27967040 FN2378 SNP G -> A AC=2;AN=192;BQB=0.491129;DP=5065;DP4=2466,2228,28,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.07675e-35;MQSB=0.809092;RPB=0.686349;SGB=71.4931;VDB=0.862325;EFF=INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN2378.SNP.6:27967041 chr06:027967041 0 W/27967041-27967041 FN2378 SNP C -> A AC=2;AN=192;BQB=0.978475;DP=5076;DP4=2451,2239,30,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.10246e-34;MQSB=0.857477;RPB=0.2896;SGB=71.4931;VDB=0.642605;EFF=INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|2|1),INTRON(MODIFIER||||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|2|1) FN1566-S.SNP.6:27967439 chr06:027967439 0 W/27967439-27967439 FN1566-S Single Base Substitution G-T INTRON Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2125-S.SNP.6:27969556 chr06:027969556 0 W/27969556-27969556 FN2125-S SNP G -> A AC=1;AN=168;BQB=0.0046691;DP=2592;DP4=1605,932,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000406984;MQSB=0.981186;RPB=0.937912;SGB=-58.653;VDB=0.59474;EFF=UTR_3_PRIME(MODIFIER||175||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.1|3|1),UTR_3_PRIME(MODIFIER||175||124|LOC_Os06g46149|protein_coding|CODING|LOC_Os06g46149.2|3|1) FN2249-S.SNP.6:27971793 chr06:027971793 0 W/27971793-27971793 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.816275;DP=3582;DP4=1627,1736,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000279174;MQB=6.85598e-05;MQSB=0.367289;RPB=0.987028;SGB=49.0954;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.6:27984069 chr06:027984069 0 W/27984069-27984069 FN4117-S SNP C -> T AC=1;AN=182;BQB=0.963499;DP=3380;DP4=1752,1544,14,7;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0;MQB=7.84684e-09;MQSB=0.220892;RPB=0.411672;SGB=89.2199;VDB=0.319556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.6:27988669 chr06:027988669 0 W/27988669-27988669 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.594196;DP=1898;DP4=953,901,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.61089e-06;MQSB=0.696193;RPB=0.476966;SGB=38.8805;VDB=0.723365;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R765|1730|LOC_Os06g46180|protein_coding|CODING|LOC_Os06g46180.1|2|1) FN2489.SNP.6:27990601 chr06:027990601 0 W/27990601-27990601 FN2489 SNP C -> A AC=1;AN=200;BQB=0.999551;DP=4694;DP4=2311,2054,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000639114;MQB=3.7148e-12;MQSB=0.367073;RPB=0.992235;SGB=47.7211;VDB=0.364756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W239C|1730|LOC_Os06g46180|protein_coding|CODING|LOC_Os06g46180.1|1|1) FN419-S.SNP.6:27990602 chr06:027990602 0 W/27990602-27990602 FN419-S Single Base Substitution C-T STOP_GAINED HET LOC_Os06g46180 retrotransposon protein, putative, unclassified, expressed SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN4110-S.SNP.6:27992166 chr06:027992166 0 W/27992166-27992166 FN4110-S SNP A -> C AC=2;AN=180;BQB=0.93831;DP=1163;DP4=1101,12,12,0;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=1.51102e-06;MQSB=0.00363208;RPB=0.975857;SGB=48.6223;VDB=0.431004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.6:27992989 chr06:027992989 0 W/27992989-27992989 FN2580-S SNP G -> A AC=1;AN=198;BQB=0.797507;DP=3536;DP4=1519,1823,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.30107e-11;MQSB=0.0446652;RPB=0.732785;SGB=68.91;VDB=0.777846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.6:27996091 chr06:027996091 0 W/27996091-27996091 FN2428 SNP C -> A AC=1;AN=200;BQB=0.881147;DP=3667;DP4=1121,2308,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54496e-10;MQSB=0.323708;RPB=0.300435;SGB=51.0851;VDB=0.0468413;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.6:27996313 chr06:027996313 0 W/27996313-27996313 FN_777-2-1 Single Base Substitution C-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3664-S.SNP.6:27996549 chr06:027996549 0 W/27996549-27996549 FN3664-S SNP C -> T AC=2;AN=190;BQB=0.99975;DP=2103;DP4=876,1094,7,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.54979e-11;MQSB=0.999873;RPB=0.52482;SGB=94.6341;VDB=0.18861;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.6:27999366 chr06:027999366 0 W/27999366-27999366 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.806532;DP=4443;DP4=2029,2149,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8882e-09;MQSB=0.600143;RPB=0.999969;SGB=51.0851;VDB=0.669445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.6:28004338 chr06:028004338 0 W/28004338-28004338 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.593462;DP=3879;DP4=1880,1803,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73342e-05;MQSB=0.970171;RPB=0.975516;SGB=32.9588;VDB=0.889551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.6:28012538 chr06:028012538 0 W/28012538-28012538 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.907881;DP=2338;DP4=2084,175,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.90958e-07;MQSB=1.05584e-14;RPB=0.343923;SGB=48.979;VDB=0.200231;EFF=INTRON(MODIFIER||||1114|LOC_Os06g46240|protein_coding|CODING|LOC_Os06g46240.1|8|1) FN4087-S.SNP.6:28012538 chr06:028012538 0 W/28012538-28012538 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.929033;DP=1740;DP4=1603,77,6,1;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00104454;MQSB=0.000387674;RPB=0.747386;SGB=26.0691;VDB=0.502303;EFF=INTRON(MODIFIER||||1114|LOC_Os06g46240|protein_coding|CODING|LOC_Os06g46240.1|8|1) FN2461.SNP.6:28019728 chr06:028019728 0 W/28019728-28019728 FN2461 SNP G -> A AC=1;AN=200;BQB=0.9718;DP=4033;DP4=1993,1825,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.15546e-09;MQSB=0.900989;RPB=0.982457;SGB=72.6852;VDB=0.525196;EFF=UTR_5_PRIME(MODIFIER||50||412|LOC_Os06g46250|protein_coding|CODING|LOC_Os06g46250.1|1|1) FN947-S.SNP.6:28029673 chr06:028029673 0 W/28029673-28029673 FN947-S Single Base Substitution A-G INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN317-S.SNP.6:28032019 chr06:028032019 0 W/28032019-28032019 FN317-S Single Base Substitution T-C INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN-100.SNP.6:28032272 chr06:028032272 0 W/28032272-28032272 FN-100 Single Base Substitution T-C INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN513-S.SNP.6:28033817 chr06:028033817 0 W/28033817-28033817 FN513-S Single Base Substitution T-A INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1689-S.SNP.6:28034932 chr06:028034932 0 W/28034932-28034932 FN1689-S SNP G -> A AC=2;AN=188;BQB=0.0114561;DP=3471;DP4=2052,1373,17,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.25336e-10;MQSB=0.985502;RPB=0.994246;SGB=-142.089;VDB=0.630065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.6:28044242 chr06:028044242 0 W/28044242-28044242 FN2464 SNP A -> G AC=1;AN=200;BQB=0.950972;DP=5122;DP4=2386,2554,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000195236;MQB=8.65837e-07;MQSB=0.985601;RPB=0.98237;SGB=40.4492;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.6:28049251 chr06:028049251 0 W/28049251-28049251 FN778-S Single Base Substitution A-G INTRON HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN-54.SNP.6:28052507 chr06:028052507 0 W/28052507-28052507 FN-54 Single Base Substitution G-A INTRON HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN4132-S.SNP.6:28052652 chr06:028052652 0 W/28052652-28052652 FN4132-S SNP A -> G AC=1;AN=182;BQB=0.620423;DP=2675;DP4=1199,1268,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.95484e-10;MQSB=0.963825;RPB=0.972223;SGB=71.1765;VDB=0.106212;EFF=INTRON(MODIFIER||||885|LOC_Os06g46284|protein_coding|CODING|LOC_Os06g46284.1|1|1),INTRON(MODIFIER||||885|LOC_Os06g46284|protein_coding|CODING|LOC_Os06g46284.2|1|1) FN2259-S.SNP.6:28052833 chr06:028052833 0 W/28052833-28052833 FN2259-S SNP G -> A AC=1;AN=190;BQB=0.961614;DP=5019;DP4=2392,2281,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.45625e-09;MQSB=0.496949;RPB=0.61271;SGB=39.6545;VDB=0.0142616;EFF=INTRON(MODIFIER||||885|LOC_Os06g46284|protein_coding|CODING|LOC_Os06g46284.1|1|1),INTRON(MODIFIER||||885|LOC_Os06g46284|protein_coding|CODING|LOC_Os06g46284.2|1|1) FN1399-S.SNP.6:28057217 chr06:028057217 0 W/28057217-28057217 FN1399-S Single Base Substitution A-G INTRON HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1420-S.SNP.6:28058903 chr06:028058903 0 W/28058903-28058903 FN1420-S Single Base Substitution C-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1548-S.SNP.6:28059040 chr06:028059040 0 W/28059040-28059040 FN1548-S SNP G -> A AC=1;AN=188;BQB=0.254673;DP=3256;DP4=1546,1672,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000227612;MQSB=0.946335;RPB=0.2633;SGB=-35.5377;VDB=0.875051;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.6:28063149 chr06:028063149 0 W/28063149-28063149 FN-399 Single Base Substitution G-A INTRON HOMO SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.6:28063149 chr06:028063149 0 W/28063149-28063149 FN399-S Single Base Substitution G-A INTRON HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3910-S.SNP.6:28063756 chr06:028063756 0 W/28063756-28063756 FN3910-S SNP G -> T AC=1;AN=158;BQB=0.973494;DP=2430;DP4=1315,1022,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.46316e-08;MQSB=0.998609;RPB=0.810177;SGB=34.0735;VDB=0.999231;EFF=INTRON(MODIFIER||||550|LOC_Os06g46310|protein_coding|CODING|LOC_Os06g46310.1|2|1),INTRON(MODIFIER||||550|LOC_Os06g46310|protein_coding|CODING|LOC_Os06g46310.2|2|1),INTRON(MODIFIER||||492|LOC_Os06g46310|protein_coding|CODING|LOC_Os06g46310.3|2|1) FN3446-S.SNP.6:28066670 chr06:028066670 0 W/28066670-28066670 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.788317;DP=2409;DP4=1289,1017,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.71535e-07;MQSB=0.992831;RPB=0.980765;SGB=39.2697;VDB=0.62814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-295.SNP.6:28069058 chr06:028069058 0 W/28069058-28069058 FN-295 Single Base Substitution A-C INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3906-S.SNP.6:28081188 chr06:028081188 0 W/28081188-28081188 FN3906-S SNP T -> G AC=1;AN=158;BQB=0.943334;DP=2233;DP4=972,1147,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.61399e-08;MQSB=0.933915;RPB=0.319914;SGB=47.0672;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.6:28092340 chr06:028092340 0 W/28092340-28092340 FN1685-S SNP A -> G AC=1;AN=188;BQB=0.465348;DP=3817;DP4=1696,2084,7,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.57514e-11;MQSB=0.968099;RPB=0.939025;SGB=17.8846;VDB=0.37857;EFF=SPLICE_SITE_REGION(LOW||||382|LOC_Os06g46330|protein_coding|CODING|LOC_Os06g46330.1|2|1),INTRON(MODIFIER||||382|LOC_Os06g46330|protein_coding|CODING|LOC_Os06g46330.1|2|1) FN2533-S.SNP.6:28099048 chr06:028099048 0 W/28099048-28099048 FN2533-S SNP T -> A AC=1;AN=198;BQB=0.334428;DP=4218;DP4=2030,2028,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.46105e-05;MQSB=0.893651;RPB=0.725818;SGB=44.9538;VDB=0.227606;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.6:28099901 chr06:028099901 0 W/28099901-28099901 FN4153-S SNP A -> G AC=1;AN=170;BQB=0.800355;DP=2638;DP4=1176,1394,1,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.12001e-07;MQSB=0.959888;RPB=0.847332;SGB=56.7575;VDB=0.260041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.6:28107316 chr06:028107316 0 W/28107316-28107316 FN1065-S Single Base Substitution C-T INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1392-S.SNP.6:28112971 chr06:028112971 0 W/28112971-28112971 FN1392-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN418-S.SNP.6:28125924 chr06:028125924 0 W/28125924-28125924 FN418-S Single Base Substitution A-G INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3362-S.SNP.6:28126064 chr06:028126064 0 W/28126064-28126064 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.982737;DP=3201;DP4=1410,1700,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05528e-13;MQSB=0.850893;RPB=0.789319;SGB=89.4385;VDB=0.4137;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.6:28126468 chr06:028126468 0 W/28126468-28126468 FN430-S Single Base Substitution T-A INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN-123.SNP.6:28126874 chr06:028126874 0 W/28126874-28126874 FN-123 Single Base Substitution C-T INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN972-S.SNP.6:28129050 chr06:028129050 0 W/28129050-28129050 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-201.SNP.6:28131027 chr06:028131027 0 W/28131027-28131027 FN-201 Single Base Substitution G-T INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2153-S.SNP.6:28131355 chr06:028131355 0 W/28131355-28131355 FN2153-S SNP C -> G AC=1;AN=168;BQB=0.577875;DP=3993;DP4=2110,1838,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20192e-10;MQSB=0.994445;RPB=0.553302;SGB=34.3388;VDB=0.505585;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.6:28138597 chr06:028138597 0 W/28138597-28138597 FN933-S Single Base Substitution T-G INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2258-S.SNP.6:28143594 chr06:028143594 0 W/28143594-28143594 FN2258-S SNP A -> G AC=2;AN=190;BQB=0.80462;DP=4605;DP4=1849,2412,13,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47896e-17;MQSB=0.348992;RPB=0.605636;SGB=153.834;VDB=0.499715;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.6:28171712 chr06:028171712 0 W/28171712-28171712 FN445-S Single Base Substitution T-G INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2435.SNP.6:28179118 chr06:028179118 0 W/28179118-28179118 FN2435 SNP A -> G AC=1;AN=200;BQB=0.993391;DP=4973;DP4=2271,2328,10,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.81368e-19;MQSB=0.998037;RPB=0.833564;SGB=27.1468;VDB=0.5601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.6:28179119 chr06:028179119 0 W/28179119-28179119 FN2435 SNP T -> C AC=1;AN=200;BQB=0.81967;DP=4981;DP4=2270,2366,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.55688e-17;MQSB=0.997698;RPB=0.932151;SGB=114.132;VDB=0.537442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.6:28193084 chr06:028193084 0 W/28193084-28193084 FN3594-S SNP A -> G AC=1;AN=188;BQB=0.572863;DP=2875;DP4=1250,1540,4,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.4336e-09;MQSB=0.96381;RPB=0.715818;SGB=57.244;VDB=0.101528;EFF=INTRON(MODIFIER||||430|LOC_Os06g46450|protein_coding|CODING|LOC_Os06g46450.1|8|1),INTRON(MODIFIER||||427|LOC_Os06g46450|protein_coding|CODING|LOC_Os06g46450.2|8|1) FN793-S.SNP.6:28197154 chr06:028197154 0 W/28197154-28197154 FN793-S Single Base Substitution T-C INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN890-S.SNP.6:28198265 chr06:028198265 0 W/28198265-28198265 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN3557-S.SNP.6:28201353 chr06:028201353 0 W/28201353-28201353 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.975129;DP=2912;DP4=1499,1360,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.60345e-08;MQSB=0.837239;RPB=0.527272;SGB=53.5223;VDB=0.904961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.6:28203501 chr06:028203501 0 W/28203501-28203501 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.973555;DP=4695;DP4=2319,2064,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.18713e-10;MQSB=0.999521;RPB=0.967357;SGB=32.0901;VDB=0.646472;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.6:28206399 chr06:028206399 0 W/28206399-28206399 FN935-S Single Base Substitution G-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN3921-S.SNP.6:28226271 chr06:028226271 0 W/28226271-28226271 FN3921-S SNP T -> A AC=2;AN=158;BQB=0.998121;DP=2519;DP4=1139,1288,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.43467e-14;MQSB=0.967337;RPB=0.945823;SGB=38.0354;VDB=0.438364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.6:28227012 chr06:028227012 0 W/28227012-28227012 FN3930-S SNP T -> C AC=1;AN=158;BQB=0.978608;DP=2515;DP4=1152,1265,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.6011e-08;MQSB=0.967209;RPB=0.322794;SGB=47.0672;VDB=0.159685;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q406R|533|LOC_Os06g46480|protein_coding|CODING|LOC_Os06g46480.1|8|1) FN1576-S.SNP.6:28229409 chr06:028229409 0 W/28229409-28229409 FN1576-S Single Base Substitution T-G INTRON Homo SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3437-S.SNP.6:28239544 chr06:028239544 0 W/28239544-28239544 FN3437-S SNP A -> T AC=1;AN=184;BQB=0.987588;DP=2877;DP4=1301,1452,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.05283e-06;MQSB=0.943279;RPB=0.0595976;SGB=21.6609;VDB=0.0267105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.6:28239545 chr06:028239545 0 W/28239545-28239545 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.978686;DP=2886;DP4=1335,1469,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.94093e-06;MQSB=0.956016;RPB=0.121857;SGB=30.6558;VDB=0.0339506;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.6:28239879 chr06:028239879 0 W/28239879-28239879 FN549-S Single Base Substitution A-G INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN4109-S.SNP.6:28240275 chr06:028240275 0 W/28240275-28240275 FN4109-S SNP C -> A AC=1;AN=182;BQB=0.922265;DP=2933;DP4=1388,1452,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.11304e-07;MQSB=0.982506;RPB=0.911083;SGB=39.6007;VDB=0.729128;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.6:28242007 chr06:028242007 0 W/28242007-28242007 FN3921-S SNP A -> G AC=2;AN=158;BQB=0.932555;DP=2489;DP4=1301,1057,10,9;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000401768;MQB=1.36681e-08;MQSB=0.670381;RPB=0.998022;SGB=77.6532;VDB=0.863507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.6:28247875 chr06:028247875 0 W/28247875-28247875 FN1219-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1625-S.SNP.6:28248330 chr06:028248330 0 W/28248330-28248330 FN1625-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g46520 retrotransposon protein, putative, unclassified, expressed SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN3301-S.SNP.6:28248974 chr06:028248974 0 W/28248974-28248974 FN3301-S SNP G -> T AC=2;AN=184;BQB=0.993002;DP=3041;DP4=1504,1431,14,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18937e-16;MQSB=0.873415;RPB=0.985011;SGB=92.0965;VDB=0.349918;EFF=INTRON(MODIFIER||||499|LOC_Os06g46520|protein_coding|CODING|LOC_Os06g46520.1|2|1) FN2489.SNP.6:28249149 chr06:028249149 0 W/28249149-28249149 FN2489 SNP G -> T AC=1;AN=200;BQB=0.979318;DP=4300;DP4=2036,2039,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.54481e-10;MQSB=0.789121;RPB=0.972866;SGB=68.0801;VDB=0.706638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L85I|499|LOC_Os06g46520|protein_coding|CODING|LOC_Os06g46520.1|2|1) FN3324-S.SNP.6:28260392 chr06:028260392 0 W/28260392-28260392 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.966165;DP=2895;DP4=1695,1101,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11543e-09;MQSB=0.997783;RPB=0.872658;SGB=39.2697;VDB=0.285527;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.6:28261903 chr06:028261903 0 W/28261903-28261903 FN1458-S Single Base Substitution G-T INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3832-S.SNP.6:28262940 chr06:028262940 0 W/28262940-28262940 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.87318;DP=4108;DP4=1745,2204,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.46286e-06;MQSB=0.913116;RPB=0.366292;SGB=49.0954;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.6:28272821 chr06:028272821 0 W/28272821-28272821 FN3607-S SNP C -> T AC=1;AN=190;BQB=0.512319;DP=2660;DP4=1571,953,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000137014;MQSB=0.697975;RPB=0.713941;SGB=28.9929;VDB=0.567998;EFF=UTR_5_PRIME(MODIFIER||168||447|LOC_Os06g46560|protein_coding|CODING|LOC_Os06g46560.1|1|1) FN-9.SNP.6:28291266 chr06:028291266 0 W/28291266-28291266 FN-9 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os06g46600 DnaK family protein, putative, expressed SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN1336-S.SNP.6:28294518 chr06:028294518 0 W/28294518-28294518 FN1336-S Single Base Substitution A-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2395.SNP.6:28294766 chr06:028294766 0 W/28294766-28294766 FN2395 SNP G -> A AC=1;AN=200;BQB=0.584626;DP=4584;DP4=2202,2167,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26828e-13;MQSB=0.447406;RPB=0.95093;SGB=95.7111;VDB=0.0024018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.6:28300325 chr06:028300325 0 W/28300325-28300325 FN-186 Single Base Substitution C-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-97.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN-97 Single Base Substitution G-A INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1745-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN1745-S SNP G -> A AC=2;AN=188;BQB=0.618144;DP=3226;DP4=1279,1883,17,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000619963;MQB=3.73664e-22;MQSB=0.00862312;RPB=0.83072;SGB=167.105;VDB=0.692194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN2739-S SNP G -> A AC=2;AN=200;BQB=0.975159;DP=4626;DP4=2163,2227,16,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000216169;MQB=8.33787e-14;MQSB=0.823318;RPB=0.962296;SGB=105.163;VDB=0.641615;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.950789;DP=3028;DP4=1422,1451,19,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000330251;MQB=5.54608e-15;MQSB=0.51261;RPB=0.611902;SGB=107.178;VDB=0.648941;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN446-S Single Base Substitution G-A INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN733-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN733-S Single Base Substitution G-A INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN944-S.SNP.6:28304037 chr06:028304037 0 W/28304037-28304037 FN944-S Single Base Substitution G-A INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN4109-S.SNP.6:28308259 chr06:028308259 0 W/28308259-28308259 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.974343;DP=2685;DP4=1293,1336,2,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.97541e-05;MQSB=0.934835;RPB=0.92727;SGB=26.0691;VDB=0.450616;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.6:28319315 chr06:028319315 0 W/28319315-28319315 FN_814-7-1 Single Base Substitution A-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3508-S.SNP.6:28320209 chr06:028320209 0 W/28320209-28320209 FN3508-S SNP C -> A AC=2;AN=188;BQB=0.52801;DP=3202;DP4=1686,1435,14,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.85656e-11;MQSB=0.708624;RPB=0.704476;SGB=16.3413;VDB=0.47552;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.6:28321050 chr06:028321050 0 W/28321050-28321050 FN-214 Single Base Substitution C-A INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3733-S.SNP.6:28323302 chr06:028323302 0 W/28323302-28323302 FN3733-S SNP A -> T AC=1;AN=190;BQB=0.964378;DP=3133;DP4=1594,1265,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00159591;MQB=6.96368e-11;MQSB=0.536464;RPB=0.816696;SGB=-9.89872;VDB=0.405048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.6:28329335 chr06:028329335 0 W/28329335-28329335 FN3681-S SNP A -> G AC=1;AN=190;BQB=0.908741;DP=3144;DP4=1256,1699,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46137e-13;MQSB=0.658708;RPB=0.881722;SGB=-11.0065;VDB=0.174824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.6:28330043 chr06:028330043 0 W/28330043-28330043 FN2198-S SNP G -> A AC=1;AN=190;BQB=0.0932467;DP=4651;DP4=2368,1991,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2243e-12;MQSB=0.0728932;RPB=0.885606;SGB=19.6499;VDB=0.85364;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.6:28330871 chr06:028330871 0 W/28330871-28330871 FN-356 Single Base Substitution A-G INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3761-S.SNP.6:28332188 chr06:028332188 0 W/28332188-28332188 FN3761-S SNP C -> G AC=1;AN=190;BQB=0.977886;DP=2291;DP4=1102,1118,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.6171e-06;MQSB=0.951375;RPB=0.0433561;SGB=35.4339;VDB=0.011201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.6:28336196 chr06:028336196 0 W/28336196-28336196 FN-356 Single Base Substitution G-C INTRON HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3325-S.SNP.6:28338310 chr06:028338310 0 W/28338310-28338310 FN3325-S SNP A -> C AC=2;AN=184;BQB=0.881622;DP=2628;DP4=1182,1355,12,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.26648e-17;MQSB=0.99714;RPB=0.705517;SGB=106.184;VDB=0.903978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.6:28338913 chr06:028338913 0 W/28338913-28338913 FN3398-S SNP A -> G AC=2;AN=184;BQB=0.870871;DP=2527;DP4=1176,1254,11,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.2352e-09;MQSB=0.086288;RPB=0.997283;SGB=80.3949;VDB=0.868023;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.6:28341322 chr06:028341322 0 W/28341322-28341322 FN1685-S SNP G -> A AC=1;AN=188;BQB=0.561619;DP=3493;DP4=1712,1735,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.92716e-10;MQSB=0.987103;RPB=0.999969;SGB=19.4279;VDB=0.95549;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.6:28346821 chr06:028346821 0 W/28346821-28346821 FN4043-S SNP C -> T AC=2;AN=168;BQB=0.684419;DP=2749;DP4=1265,1377,20,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.47892e-22;MQSB=0.949768;RPB=0.984849;SGB=189.528;VDB=0.511077;EFF=INTRON(MODIFIER||||644|LOC_Os06g46670|protein_coding|CODING|LOC_Os06g46670.3|1|1),INTRON(MODIFIER||||845|LOC_Os06g46670|protein_coding|CODING|LOC_Os06g46670.2|1|1) FN-315.SNP.6:28349617 chr06:028349617 0 W/28349617-28349617 FN-315 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g46670 glutamate receptor, putative, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN794-S.SNP.6:28349756 chr06:028349756 0 W/28349756-28349756 FN794-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os06g46670 glutamate receptor, putative, expressed SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1529-S.SNP.6:28358756 chr06:028358756 0 W/28358756-28358756 FN1529-S Single Base Substitution A-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1176-S.SNP.6:28359723 chr06:028359723 0 W/28359723-28359723 FN1176-S Single Base Substitution C-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1064-S.SNP.6:28364582 chr06:028364582 0 W/28364582-28364582 FN1064-S Single Base Substitution G-A INTRON HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2665-S.SNP.6:28383275 chr06:028383275 0 W/28383275-28383275 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.97987;DP=4924;DP4=2320,2337,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.81533e-16;MQSB=0.85767;RPB=0.261239;SGB=55.5366;VDB=0.150043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.6:28386898 chr06:028386898 0 W/28386898-28386898 FN3930-S SNP A -> C AC=1;AN=158;BQB=0.71834;DP=2606;DP4=1220,1255,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.0155e-08;MQSB=0.95286;RPB=0.766944;SGB=57.6596;VDB=0.128712;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.6:28393161 chr06:028393161 0 W/28393161-28393161 FN467-S Single Base Substitution A-T INTRON HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2366.SNP.6:28398682 chr06:028398682 0 W/28398682-28398682 FN2366 SNP T -> A AC=1;AN=192;BQB=0.324164;DP=5230;DP4=2493,2358,17,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.02997e-14;MQSB=0.990291;RPB=0.337133;SGB=44.3;VDB=0.0770116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.6:28399553 chr06:028399553 0 W/28399553-28399553 FN1358-S Single Base Substitution A-G INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN3420-S.SNP.6:28417363 chr06:028417363 0 W/28417363-28417363 FN3420-S SNP G -> A AC=1;AN=184;BQB=0.848319;DP=3251;DP4=1963,1200,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0199938;MQB=0.262158;MQSB=4.38167e-13;RPB=0.88085;SGB=35.7479;VDB=0.592507;EFF=INTRON(MODIFIER||||337|LOC_Os06g46799|protein_coding|CODING|LOC_Os06g46799.1|3|1) FN-315.SNP.6:28430656 chr06:028430656 0 W/28430656-28430656 FN-315 Single Base Substitution A-G INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1634-S.SNP.6:28435598 chr06:028435598 0 W/28435598-28435598 FN1634-S Single Base Substitution T-C INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1053-S.SNP.6:28436391 chr06:028436391 0 W/28436391-28436391 FN1053-S Single Base Substitution G-C INTERGENIC HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN3412-S.SNP.6:28436827 chr06:028436827 0 W/28436827-28436827 FN3412-S SNP A -> T AC=1;AN=184;BQB=0.754139;DP=2655;DP4=1211,1347,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42289e-06;MQSB=0.984076;RPB=0.0974903;SGB=39.699;VDB=0.270872;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.6:28442271 chr06:028442271 0 W/28442271-28442271 FN4166-S SNP C -> T AC=1;AN=170;BQB=0.982724;DP=2170;DP4=1030,1091,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.054041;MQSB=2.16386e-11;RPB=0.342361;SGB=17.6652;VDB=0.190234;EFF=INTRON(MODIFIER||||271|LOC_Os06g46860|protein_coding|CODING|LOC_Os06g46860.1|2|1) FN1150-S.SNP.6:28458571 chr06:028458571 0 W/28458571-28458571 FN1150-S Single Base Substitution A-C INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN4136-S.SNP.6:28479505 chr06:028479505 0 W/28479505-28479505 FN4136-S SNP A -> G AC=2;AN=170;BQB=0.900648;DP=2679;DP4=1346,1258,11,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.74453e-15;MQSB=0.969792;RPB=0.906252;SGB=76.1898;VDB=0.296449;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R305G|501|LOC_Os06g46940|protein_coding|CODING|LOC_Os06g46940.2|9|1),SPLICE_SITE_REGION(LOW||||226|LOC_Os06g46940|protein_coding|CODING|LOC_Os06g46940.1|10|1),INTRON(MODIFIER||||226|LOC_Os06g46940|protein_coding|CODING|LOC_Os06g46940.1|10|1) FN2682-S.SNP.6:28483092 chr06:028483092 0 W/28483092-28483092 FN2682-S SNP G -> A AC=1;AN=200;BQB=0.860264;DP=4969;DP4=1997,2680,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60653e-06;MQSB=0.739019;RPB=0.0903257;SGB=29.4541;VDB=0.171769;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.6:28486128 chr06:028486128 0 W/28486128-28486128 FN318-S Single Base Substitution C-G INTERGENIC HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. W472-5-1.SNP.6:28489974 chr06:028489974 0 W/28489974-28489974 W472-5-1 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN320-S.SNP.6:28490727 chr06:028490727 0 W/28490727-28490727 FN320-S Single Base Substitution T-C INTERGENIC HOMO SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN-350.SNP.6:28492082 chr06:028492082 0 W/28492082-28492082 FN-350 Single Base Substitution C-T INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1072-S.SNP.6:28501299 chr06:028501299 0 W/28501299-28501299 FN1072-S Single Base Substitution G-T INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1116-S.SNP.6:28503138 chr06:028503138 0 W/28503138-28503138 FN1116-S Single Base Substitution C-A INTERGENIC HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN4145-S.SNP.6:28515411 chr06:028515411 0 W/28515411-28515411 FN4145-S SNP T -> G AC=2;AN=170;BQB=0.997772;DP=2261;DP4=1203,959,9,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.14117e-07;MQSB=0.648597;RPB=0.304339;SGB=56.7575;VDB=0.580506;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.6:28516308 chr06:028516308 0 W/28516308-28516308 FN671-S Single Base Substitution G-C INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3880-S.SNP.6:28518559 chr06:028518559 0 W/28518559-28518559 FN3880-S SNP T -> A AC=1;AN=158;BQB=0.898153;DP=2881;DP4=1268,1418,6,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.98379e-11;MQSB=0.97328;RPB=0.973971;SGB=82.0227;VDB=0.616221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.6:28526518 chr06:028526518 0 W/28526518-28526518 FN1427-S Single Base Substitution C-T INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN725-S.SNP.6:28530643 chr06:028530643 0 W/28530643-28530643 FN725-S Single Base Substitution T-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN725-S.SNP.6:28530645 chr06:028530645 0 W/28530645-28530645 FN725-S Single Base Substitution T-C INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN1506-S.SNP.6:28532765 chr06:028532765 0 W/28532765-28532765 FN1506-S Single Base Substitution G-A INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3308-S.SNP.6:28534599 chr06:028534599 0 W/28534599-28534599 FN3308-S SNP A -> T AC=1;AN=184;BQB=0.889215;DP=3557;DP4=1548,1871,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.95896e-14;MQSB=0.633134;RPB=0.916586;SGB=18.9766;VDB=0.0454884;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.6:28543139 chr06:028543139 0 W/28543139-28543139 FN-178 Single Base Substitution C-T INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1006-S.SNP.6:28544255 chr06:028544255 0 W/28544255-28544255 FN1006-S Single Base Substitution C-T INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN-197.SNP.6:28547663 chr06:028547663 0 W/28547663-28547663 FN-197 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g47100 OsFBX203 - F-box domain containing protein, expressed SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN3057-S.SNP.6:28550827 chr06:028550827 0 W/28550827-28550827 FN3057-S SNP A -> G AC=1;AN=184;BQB=0.974737;DP=3121;DP4=1363,1641,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.48989e-06;MQSB=0.916001;RPB=0.105646;SGB=35.1773;VDB=0.064148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.6:28560366 chr06:028560366 0 W/28560366-28560366 FN1281-S Single Base Substitution G-A INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2385.SNP.6:28561850 chr06:028561850 0 W/28561850-28561850 FN2385 SNP G -> A AC=2;AN=192;BQB=0.961341;DP=5178;DP4=2522,2292,38,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.42599e-38;MQSB=0.420579;RPB=0.786748;SGB=88.7009;VDB=0.412641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R226Q|540|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R93Q|468|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R226Q|336|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.3|7|1),SPLICE_SITE_REGION(LOW||||540|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.1|7|1),SPLICE_SITE_REGION(LOW||||468|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.2|6|1),SPLICE_SITE_REGION(LOW||||336|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.3|7|1) FN3570-S.SNP.6:28561850 chr06:028561850 0 W/28561850-28561850 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.915837;DP=3039;DP4=1547,1365,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.67772e-05;MQSB=0.896278;RPB=0.487697;SGB=28.9929;VDB=0.0981849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R226Q|540|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R93Q|468|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R226Q|336|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.3|7|1),SPLICE_SITE_REGION(LOW||||540|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.1|7|1),SPLICE_SITE_REGION(LOW||||468|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.2|6|1),SPLICE_SITE_REGION(LOW||||336|LOC_Os06g47130|protein_coding|CODING|LOC_Os06g47130.3|7|1) FN3659-S.SNP.6:28564988 chr06:028564988 0 W/28564988-28564988 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.550682;DP=2662;DP4=1347,1206,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000212831;MQSB=0.991211;RPB=0.877939;SGB=18.3316;VDB=0.919551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.6:28564994 chr06:028564994 0 W/28564994-28564994 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.970297;DP=4315;DP4=2073,2001,10,23;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.12882e-13;MQSB=0.992028;RPB=0.21132;SGB=108.456;VDB=0.49928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.6:28565191 chr06:028565191 0 W/28565191-28565191 FN1506-S Single Base Substitution C-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. 703-5.SNP.6:28566340 chr06:028566340 0 W/28566340-28566340 703-5 Single Base Substitution G-A INTERGENIC Homo SNo: 1454, Mutant_ID: 703-5, Generation: M2, Mutations: 14, Genes: 15, Seed availability: No. FN1301-S.SNP.6:28573325 chr06:028573325 0 W/28573325-28573325 FN1301-S Single Base Substitution C-A INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-261.SNP.6:28591158 chr06:028591158 0 W/28591158-28591158 FN-261 Single Base Substitution A-T INTERGENIC HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN-146.SNP.6:28591269 chr06:028591269 0 W/28591269-28591269 FN-146 Single Base Substitution C-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1265-S.SNP.6:28593499 chr06:028593499 0 W/28593499-28593499 FN1265-S Single Base Substitution G-C INTRON HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3373-S.SNP.6:28603165 chr06:028603165 0 W/28603165-28603165 FN3373-S SNP G -> T AC=1;AN=184;BQB=0.0476145;DP=3253;DP4=1545,1393,7,110;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0138334;MQB=0;MQSB=1.67553e-07;RPB=1.55293e-10;SGB=-1526.73;VDB=1.16161e-12;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D316Y|891|LOC_Os06g47170|protein_coding|CODING|LOC_Os06g47170.1|3|1) FN3373-S.SNP.6:28603166 chr06:028603166 0 W/28603166-28603166 FN3373-S SNP A -> C AC=1;AN=184;BQB=0.164222;DP=3257;DP4=1503,1385,5,116;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0141234;MQB=0;MQSB=4.91572e-08;RPB=2.9556e-11;SGB=-1505.46;VDB=1.61389e-11;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D316A|891|LOC_Os06g47170|protein_coding|CODING|LOC_Os06g47170.1|3|1) FN1026-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN1026-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1320-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN1320-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN1355-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1506-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN1506-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2125-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN2125-S SNP C -> G AC=1;AN=168;BQB=0.986244;DP=3356;DP4=1683,1626,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.109952;MQB=0.729918;MQSB=0.00622181;RPB=0.999608;SGB=-14.0801;VDB=0.122383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S801W|891|LOC_Os06g47170|protein_coding|CODING|LOC_Os06g47170.1|5|1) FN224-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN224-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN4009-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN4009-S SNP C -> G AC=1;AN=168;BQB=0.95309;DP=3163;DP4=1466,1599,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0859943;MQB=0.904084;MQSB=0.852044;RPB=0.453053;SGB=69.0561;VDB=0.773249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S801W|891|LOC_Os06g47170|protein_coding|CODING|LOC_Os06g47170.1|5|1) FN508-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN508-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN672-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN672-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN748-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN748-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN887-S.SNP.6:28604747 chr06:028604747 0 W/28604747-28604747 FN887-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN3943-S.SNP.6:28604821 chr06:028604821 0 W/28604821-28604821 FN3943-S SNP G -> A AC=1;AN=168;BQB=0.172118;DP=3556;DP4=1735,1721,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0556805;MQB=0.384392;MQSB=0.862447;RPB=0.871216;SGB=43.3113;VDB=0.0947588;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E826K|891|LOC_Os06g47170|protein_coding|CODING|LOC_Os06g47170.1|5|1) FN2721-S.SNP.6:28608510 chr06:028608510 0 W/28608510-28608510 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.48179;DP=4818;DP4=2420,2166,13,4;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.00726443;MQB=0.544542;MQSB=0.0793103;RPB=0.726553;SGB=7.88476;VDB=0.69939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M822I|1298|LOC_Os06g47180|protein_coding|CODING|LOC_Os06g47180.1|2|1) FN1247-S.SNP.6:28615911 chr06:028615911 0 W/28615911-28615911 FN1247-S Single Base Substitution C-T INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN3720-S.SNP.6:28615911 chr06:028615911 0 W/28615911-28615911 FN3720-S SNP C -> T AC=2;AN=190;BQB=0.333642;DP=2613;DP4=1124,1335,12,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48415e-16;MQSB=0.83325;RPB=0.618304;SGB=96.5165;VDB=0.884038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.6:28615912 chr06:028615912 0 W/28615912-28615912 FN1247-S Single Base Substitution A-C INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN3720-S.SNP.6:28615912 chr06:028615912 0 W/28615912-28615912 FN3720-S SNP A -> C AC=2;AN=190;BQB=0.193938;DP=2608;DP4=1104,1244,13,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33422e-14;MQSB=0.988263;RPB=0.7927;SGB=33.6348;VDB=0.872523;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.6:28617790 chr06:028617790 0 W/28617790-28617790 FN4178-S SNP C -> T AC=1;AN=170;BQB=0.568799;DP=2517;DP4=1105,1345,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52135e-06;MQSB=0.99496;RPB=0.608751;SGB=47.8722;VDB=0.859771;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L74|150|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L74|146|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L74|125|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.3|1|1) FN2125-S.SNP.6:28618916 chr06:028618916 0 W/28618916-28618916 FN2125-S SNP C -> A AC=1;AN=168;BQB=0.0184505;DP=4127;DP4=2095,1989,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03557e-07;MQSB=0.968476;RPB=0.678285;SGB=-100.631;VDB=0.901292;EFF=UTR_3_PRIME(MODIFIER||970||125|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.3|1|1),INTRON(MODIFIER||||150|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.1|1|1),INTRON(MODIFIER||||146|LOC_Os06g47200|protein_coding|CODING|LOC_Os06g47200.2|1|1) FN2125-S.SNP.6:28623725 chr06:028623725 0 W/28623725-28623725 FN2125-S SNP G -> T AC=1;AN=168;BQB=0.66499;DP=4234;DP4=2048,2142,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.69047e-16;MQSB=0.928415;RPB=0.937013;SGB=-9.7719;VDB=0.658716;EFF=INTRON(MODIFIER||||707|LOC_Os06g47210|protein_coding|CODING|LOC_Os06g47210.1|8|1) FN3050-S.SNP.6:28634308 chr06:028634308 0 W/28634308-28634308 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.918108;DP=3204;DP4=1667,1423,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.02755e-08;MQSB=0.993636;RPB=0.882596;SGB=53.2642;VDB=0.758614;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.6:28634829 chr06:028634829 0 W/28634829-28634829 FN1702-S SNP C -> T AC=1;AN=188;BQB=0.95437;DP=3527;DP4=2145,1340,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.91227e-09;MQSB=0.832683;RPB=0.923247;SGB=7.0815;VDB=0.203378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.6:28634932 chr06:028634932 0 W/28634932-28634932 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.783617;DP=4987;DP4=2191,2286,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.08558e-14;MQSB=0.122414;RPB=0.4902;SGB=-6.45336;VDB=0.648497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.6:28636521 chr06:028636521 0 W/28636521-28636521 FN4305-S SNP A -> T AC=2;AN=170;BQB=0.967734;DP=2521;DP4=1302,1075,15,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.64661e-14;MQSB=0.977781;RPB=0.937241;SGB=105.627;VDB=0.708974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.6:28637031 chr06:028637031 0 W/28637031-28637031 FN1039-S Single Base Substitution G-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN_814-7-1.SNP.6:28640245 chr06:028640245 0 W/28640245-28640245 FN_814-7-1 Single Base Substitution A-C HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN-372.SNP.6:28640897 chr06:028640897 0 W/28640897-28640897 FN-372 Single Base Substitution T-A INTRON HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-375.SNP.6:28652403 chr06:028652403 0 W/28652403-28652403 FN-375 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g47260 ras-related protein, putative, expressed SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN571-S.SNP.6:28652403 chr06:028652403 0 W/28652403-28652403 FN571-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g47260 ras-related protein, putative, expressed SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN-219.SNP.6:28657265 chr06:028657265 0 W/28657265-28657265 FN-219 Single Base Substitution T-G INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1396-S.SNP.6:28679223 chr06:028679223 0 W/28679223-28679223 FN1396-S Single Base Substitution T-A INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN3653-S.SNP.6:28682985 chr06:028682985 0 W/28682985-28682985 FN3653-S SNP T -> G AC=1;AN=190;BQB=0.988542;DP=3101;DP4=1375,1614,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.87883e-07;MQSB=0.991923;RPB=0.701468;SGB=25.439;VDB=0.211686;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Cgc|S519R|560|LOC_Os06g47320|protein_coding|CODING|LOC_Os06g47320.1|13|1) FN4133-S.SNP.6:28683788 chr06:028683788 0 W/28683788-28683788 FN4133-S SNP T -> A AC=1;AN=182;BQB=0.9274;DP=2660;DP4=1273,1305,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.02934e-06;MQSB=0.996944;RPB=0.971961;SGB=35.0899;VDB=0.814374;EFF=INTRON(MODIFIER||||560|LOC_Os06g47320|protein_coding|CODING|LOC_Os06g47320.1|10|1) W279-4-1.SNP.6:28693497 chr06:028693497 0 W/28693497-28693497 W279-4-1 Single Base Substitution A-G INTRON HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3629-S.SNP.6:28723834 chr06:028723834 0 W/28723834-28723834 FN3629-S SNP G -> C AC=1;AN=190;BQB=0.743676;DP=2503;DP4=1370,913,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10733e-10;MQSB=0.0226695;RPB=0.805061;SGB=71.8647;VDB=0.667261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Gta|L175V|253|LOC_Os06g47400|protein_coding|CODING|LOC_Os06g47400.1|1|1) FN2531-S.SNP.6:28725432 chr06:028725432 0 W/28725432-28725432 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.947627;DP=4058;DP4=1955,1915,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.88455e-13;MQSB=0.947644;RPB=0.146588;SGB=65.3149;VDB=0.846756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R88C|150|LOC_Os06g47410|protein_coding|CODING|LOC_Os06g47410.1|2|1) FN2583-S.SNP.6:28726491 chr06:028726491 0 W/28726491-28726491 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.987303;DP=4885;DP4=2055,2613,7,12;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00675537;MQB=0.993968;MQSB=0.963148;RPB=0.818365;SGB=81.8956;VDB=0.344898;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V13|150|LOC_Os06g47410|protein_coding|CODING|LOC_Os06g47410.1|1|1) FN2454.SNP.6:28735590 chr06:028735590 0 W/28735590-28735590 FN2454 SNP C -> T AC=1;AN=200;BQB=0.948287;DP=5087;DP4=1932,2866,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.11852e-11;MQSB=0.989145;RPB=0.545246;SGB=72.6852;VDB=0.279326;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.6:28741159 chr06:028741159 0 W/28741159-28741159 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.954343;DP=2730;DP4=1282,1347,21,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.30772e-20;MQSB=0.981692;RPB=1;SGB=71.1796;VDB=0.796136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3469-S.SNP.6:28761919 chr06:028761919 0 W/28761919-28761919 FN3469-S SNP C -> T AC=2;AN=184;BQB=0.875924;DP=2703;DP4=1202,1345,10,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.55372e-17;MQSB=0.770497;RPB=0.501946;SGB=95.6183;VDB=0.761421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.6:28767432 chr06:028767432 0 W/28767432-28767432 FN1764-S SNP C -> T AC=1;AN=188;BQB=0.854821;DP=2901;DP4=1440,1416,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58998e-09;MQSB=0.946756;RPB=0.955918;SGB=-15.5431;VDB=0.308824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.6:28767883 chr06:028767883 0 W/28767883-28767883 FN1754-S SNP C -> T AC=1;AN=188;BQB=0.0409814;DP=3093;DP4=1602,1453,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0061429;MQB=0.476029;MQSB=0.992485;RPB=0.697157;SGB=-58.9891;VDB=0.235391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.6:28769077 chr06:028769077 0 W/28769077-28769077 FN3540-S SNP T -> C AC=1;AN=188;BQB=0.997498;DP=2952;DP4=1523,1241,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.71239e-13;MQSB=0.0530899;RPB=0.995648;SGB=67.8739;VDB=0.0771646;EFF=UTR_5_PRIME(MODIFIER||300||184|LOC_Os06g47520|protein_coding|CODING|LOC_Os06g47520.1|1|1) FN-150.SNP.6:28773170 chr06:028773170 0 W/28773170-28773170 FN-150 Single Base Substitution C-A INTRON HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3478-S.SNP.6:28780606 chr06:028780606 0 W/28780606-28780606 FN3478-S SNP A -> T AC=1;AN=184;BQB=0.276791;DP=1874;DP4=1188,573,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.77523e-05;MQSB=0.400666;RPB=0.521449;SGB=42.7914;VDB=0.607298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.6:28787460 chr06:028787460 0 W/28787460-28787460 FN2782-S SNP G -> A AC=2;AN=198;BQB=0.862048;DP=4418;DP4=1621,2476,26,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.38161e-35;MQSB=0.994623;RPB=0.775287;SGB=260.924;VDB=0.163646;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.6:28790648 chr06:028790648 0 W/28790648-28790648 FN1504-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2541-S.SNP.6:28797975 chr06:028797975 0 W/28797975-28797975 FN2541-S SNP A -> G AC=1;AN=198;BQB=0.399286;DP=4415;DP4=2296,1886,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.3895e-14;MQSB=0.821275;RPB=0.944289;SGB=47.5102;VDB=0.454307;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.6:28803322 chr06:028803322 0 W/28803322-28803322 FN4011-S SNP A -> G AC=2;AN=168;BQB=0.866364;DP=2525;DP4=1161,1212,20,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.8501e-15;MQSB=0.990219;RPB=0.773788;SGB=63.5086;VDB=0.439207;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q524|991|LOC_Os06g47570|protein_coding|CODING|LOC_Os06g47570.1|1|1) FN2241-S.SNP.6:28804386 chr06:028804386 0 W/28804386-28804386 FN2241-S SNP C -> G AC=1;AN=190;BQB=0.53476;DP=4911;DP4=2507,2137,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.44987e-07;MQSB=0.991276;RPB=0.872872;SGB=28.7675;VDB=0.413837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A879G|991|LOC_Os06g47570|protein_coding|CODING|LOC_Os06g47570.1|1|1) 705-2.SNP.6:28806578 chr06:028806578 0 W/28806578-28806578 705-2 Single Base Substitution G-T INTERGENIC Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-7.SNP.6:28806578 chr06:028806578 0 W/28806578-28806578 705-7 Single Base Substitution G-T INTERGENIC Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN3442-S.SNP.6:28816751 chr06:028816751 0 W/28816751-28816751 FN3442-S SNP G -> T AC=1;AN=184;BQB=0.818966;DP=2371;DP4=1194,1112,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.91665e-07;MQSB=0.969266;RPB=0.871624;SGB=53.2642;VDB=0.60913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.6:28822442 chr06:028822442 0 W/28822442-28822442 FN4305-S SNP G -> A AC=2;AN=170;BQB=0.930957;DP=2369;DP4=1146,1152,9,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.74174e-16;MQSB=0.685122;RPB=0.605885;SGB=110.069;VDB=0.270952;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.6:28822443 chr06:028822443 0 W/28822443-28822443 FN4305-S SNP T -> A AC=2;AN=170;BQB=0.94882;DP=2354;DP4=1041,1142,9,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.60498e-16;MQSB=0.687031;RPB=0.714325;SGB=79.6325;VDB=0.290235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-79.SNP.6:28822643 chr06:028822643 0 W/28822643-28822643 FN-79 Single Base Substitution T-G INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1192-S.SNP.6:28830093 chr06:028830093 0 W/28830093-28830093 FN1192-S Single Base Substitution C-T INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN2083-S.SNP.6:28837890 chr06:028837890 0 W/28837890-28837890 FN2083-S SNP A -> C AC=1;AN=168;BQB=0.813509;DP=3343;DP4=1718,1566,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.1292e-11;MQSB=0.979776;RPB=0.9943;SGB=-42.3508;VDB=0.0374722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.6:28839041 chr06:028839041 0 W/28839041-28839041 FN1656-S Single Base Substitution G-A INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN3651-S.SNP.6:28840240 chr06:028840240 0 W/28840240-28840240 FN3651-S SNP T -> A AC=1;AN=190;BQB=0.867978;DP=2683;DP4=1279,1180,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000372717;MQB=4.48258e-08;MQSB=0.914905;RPB=0.999568;SGB=32.5467;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.6:28840241 chr06:028840241 0 W/28840241-28840241 FN3651-S SNP T -> A AC=1;AN=190;BQB=0.946969;DP=2689;DP4=1256,1207,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000371885;MQB=1.49518e-07;MQSB=0.876273;RPB=0.885725;SGB=-15.4375;VDB=0.807031;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.6:28840436 chr06:028840436 0 W/28840436-28840436 FN439-S Single Base Substitution G-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. 705-2.SNP.6:28853820 chr06:028853820 0 W/28853820-28853820 705-2 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os06g47650 phytosulfokine receptor precursor, putative, expressed SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-7.SNP.6:28853820 chr06:028853820 0 W/28853820-28853820 705-7 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os06g47650 phytosulfokine receptor precursor, putative, expressed SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN2139-S.SNP.6:28854759 chr06:028854759 0 W/28854759-28854759 FN2139-S SNP A -> C AC=2;AN=168;BQB=0.937395;DP=3852;DP4=1996,1781,29,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.56719e-29;MQSB=0.934682;RPB=0.935121;SGB=-59.4263;VDB=0.198847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aCt|N420T|1066|LOC_Os06g47650|protein_coding|CODING|LOC_Os06g47650.1|1|1) FN2482.SNP.6:28861123 chr06:028861123 0 W/28861123-28861123 FN2482 SNP G -> A AC=1;AN=200;BQB=0.0399217;DP=4304;DP4=2172,1942,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50239e-06;MQSB=0.821475;RPB=0.333372;SGB=16.4591;VDB=0.705512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.6:28871108 chr06:028871108 0 W/28871108-28871108 FN3806-S SNP A -> T AC=1;AN=190;BQB=0.289535;DP=3417;DP4=1330,1897,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.39377e-07;MQSB=0.774961;RPB=0.294824;SGB=33.8752;VDB=0.233185;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.6:28878719 chr06:028878719 0 W/28878719-28878719 FN1142-S Single Base Substitution C-A INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2739-S.SNP.6:28889392 chr06:028889392 0 W/28889392-28889392 FN2739-S SNP T -> C AC=1;AN=200;BQB=0.965835;DP=4768;DP4=2087,2274,14,7;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00125839;MQB=0.089444;MQSB=0.14589;RPB=1;SGB=-11.2947;VDB=0.440259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D920G|1063|LOC_Os06g47740|protein_coding|CODING|LOC_Os06g47740.1|1|1) FN3670-S.SNP.6:28894787 chr06:028894787 0 W/28894787-28894787 FN3670-S SNP G -> C AC=1;AN=190;BQB=0.972424;DP=2597;DP4=1358,1138,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68235e-07;MQSB=0.945855;RPB=0.944568;SGB=28.9929;VDB=0.724486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.6:28897301 chr06:028897301 0 W/28897301-28897301 FN1295-S Single Base Substitution C-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1295-S.SNP.6:28897303 chr06:028897303 0 W/28897303-28897303 FN1295-S Single Base Substitution C-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1024-S.SNP.6:28903701 chr06:028903701 0 W/28903701-28903701 FN1024-S Single Base Substitution G-A INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3733-S.SNP.6:28916963 chr06:028916963 0 W/28916963-28916963 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.881269;DP=2236;DP4=1154,971,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.46682e-07;MQSB=0.0295729;RPB=0.629346;SGB=62.7569;VDB=0.219508;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.6:28917145 chr06:028917145 0 W/28917145-28917145 FN1484-S Single Base Substitution G-A INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1057-S.SNP.6:28918591 chr06:028918591 0 W/28918591-28918591 FN1057-S Single Base Substitution A-G INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1345-S.SNP.6:28922639 chr06:028922639 0 W/28922639-28922639 FN1345-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2435.SNP.6:28928521 chr06:028928521 0 W/28928521-28928521 FN2435 SNP G -> T AC=1;AN=200;BQB=0.637891;DP=4979;DP4=2433,2192,21,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09731e-16;MQSB=0.740652;RPB=0.0389217;SGB=-42.8173;VDB=0.655405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D236E|520|LOC_Os06g47800|protein_coding|CODING|LOC_Os06g47800.1|2|1) FN-62.SNP.6:28930751 chr06:028930751 0 W/28930751-28930751 FN-62 Single Base Substitution A-G INTERGENIC HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2232-S.SNP.6:28931565 chr06:028931565 0 W/28931565-28931565 FN2232-S SNP A -> G AC=1;AN=190;BQB=0.781134;DP=5381;DP4=2774,2294,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.81704e-05;MQSB=2.89191e-08;RPB=0.702907;SGB=75.1932;VDB=0.996891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.6:28932683 chr06:028932683 0 W/28932683-28932683 FN3849-S SNP G -> C AC=1;AN=158;BQB=0.995566;DP=2380;DP4=1131,1134,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.47036e-09;MQSB=0.997497;RPB=0.996621;SGB=64.5449;VDB=0.776679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.6:28933990 chr06:028933990 0 W/28933990-28933990 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.930494;DP=4999;DP4=2470,2240,18,16;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0412082;MQB=0.74315;MQSB=0;RPB=0.805516;SGB=112.373;VDB=0.437684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3302-S.SNP.6:28933990 chr06:028933990 0 W/28933990-28933990 FN3302-S SNP G -> A AC=2;AN=184;BQB=0.977173;DP=3157;DP4=1641,1400,12,12;HOB=0.0215028;ICB=0.494625;MQ=32;MQ0F=0.0164713;MQB=0.703721;MQSB=0;RPB=0.5456;SGB=103.004;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.6:28933990 chr06:028933990 0 W/28933990-28933990 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.999739;DP=2930;DP4=1486,1365,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0201365;MQB=0.351066;MQSB=0;RPB=0.950143;SGB=46.3132;VDB=0.196584;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.6:28933990 chr06:028933990 0 W/28933990-28933990 FN863-S Single Base Substitution G-A INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN_N1-151-7.SNP.6:28939790 chr06:028939790 0 W/28939790-28939790 FN_N1-151-7 Single Base Substitution A-G HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2207-S.SNP.6:28951156 chr06:028951156 0 W/28951156-28951156 FN2207-S SNP A -> G AC=2;AN=190;BQB=0.577266;DP=4423;DP4=2178,1633,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.39333e-11;MQSB=0.0727895;RPB=0.667156;SGB=-8.79096;VDB=0.123194;EFF=INTRON(MODIFIER||||98|LOC_Os06g47834|protein_coding|CODING|LOC_Os06g47834.1|1|1) FN2676-S.SNP.6:28954152 chr06:028954152 0 W/28954152-28954152 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.539343;DP=4985;DP4=2108,2631,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46033e-13;MQSB=0.999827;RPB=0.801128;SGB=65.5058;VDB=0.928667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.6:28961096 chr06:028961096 0 W/28961096-28961096 FN1335-S Single Base Substitution A-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1047-S.SNP.6:28962474 chr06:028962474 0 W/28962474-28962474 FN1047-S Single Base Substitution A-G INTERGENIC HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2177-S.SNP.6:28962962 chr06:028962962 0 W/28962962-28962962 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.0308864;DP=2726;DP4=1356,1303,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000841802;MQSB=0.827457;RPB=0.964091;SGB=4.1907;VDB=0.763618;EFF=INTRON(MODIFIER||||317|LOC_Os06g47860|protein_coding|CODING|LOC_Os06g47860.1|1|1),INTRON(MODIFIER||||316|LOC_Os06g47860|protein_coding|CODING|LOC_Os06g47860.2|1|1) FN2177-S.SNP.6:28962967 chr06:028962967 0 W/28962967-28962967 FN2177-S SNP C -> T AC=1;AN=168;BQB=0.0324604;DP=2748;DP4=1368,1300,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00204008;MQSB=0.764373;RPB=0.997336;SGB=-37.7974;VDB=0.910233;EFF=INTRON(MODIFIER||||317|LOC_Os06g47860|protein_coding|CODING|LOC_Os06g47860.1|1|1),INTRON(MODIFIER||||316|LOC_Os06g47860|protein_coding|CODING|LOC_Os06g47860.2|1|1) FN870-S.SNP.6:28965220 chr06:028965220 0 W/28965220-28965220 FN870-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g47860 expressed protein SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3810-S.SNP.6:28971360 chr06:028971360 0 W/28971360-28971360 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.995794;DP=2835;DP4=1314,1430,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1898e-09;MQSB=0.955524;RPB=0.937655;SGB=43.2083;VDB=0.520002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T184M|630|LOC_Os06g47890|protein_coding|CODING|LOC_Os06g47890.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T184M|630|LOC_Os06g47890|protein_coding|CODING|LOC_Os06g47890.2|2|1) FN2602-S.SNP.6:28972389 chr06:028972389 0 W/28972389-28972389 FN2602-S SNP G -> C AC=2;AN=198;BQB=0.782921;DP=4049;DP4=1844,1997,20,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.17219e-19;MQSB=0.997291;RPB=0.975087;SGB=65.676;VDB=0.214841;EFF=INTRON(MODIFIER||||630|LOC_Os06g47890|protein_coding|CODING|LOC_Os06g47890.1|1|1),INTRON(MODIFIER||||630|LOC_Os06g47890|protein_coding|CODING|LOC_Os06g47890.2|1|1) FN-219.SNP.6:28974706 chr06:028974706 0 W/28974706-28974706 FN-219 Single Base Substitution A-G INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN-121.SNP.6:28975124 chr06:028975124 0 W/28975124-28975124 FN-121 Single Base Substitution T-C INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1156-XA21.SNP.6:28976397 chr06:028976397 0 W/28976397-28976397 FN1156-XA21 Single Base Substitution A-G INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN886-S.SNP.6:28976808 chr06:028976808 0 W/28976808-28976808 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN-51.SNP.6:28984734 chr06:028984734 0 W/28984734-28984734 FN-51 Single Base Substitution G-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.6:28984734 chr06:028984734 0 W/28984734-28984734 FN-51 Single Base Substitution G-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1718-S.SNP.6:28991696 chr06:028991696 0 W/28991696-28991696 FN1718-S SNP G -> A AC=2;AN=188;BQB=0.779224;DP=3544;DP4=1405,2094,14,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=7.73285e-09;MQSB=0.148446;RPB=0.739386;SGB=25.601;VDB=0.637355;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.6:28996787 chr06:028996787 0 W/28996787-28996787 FN4071-S SNP C -> T AC=2;AN=182;BQB=0.981856;DP=3697;DP4=1605,2005,14,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.1186e-18;MQSB=0.99722;RPB=0.480458;SGB=143.35;VDB=0.987692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D191N|484|LOC_Os06g47950|protein_coding|CODING|LOC_Os06g47950.1|1|1) FN2625-S.SNP.6:28998560 chr06:028998560 0 W/28998560-28998560 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.97591;DP=4605;DP4=2339,2011,22,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05213e-18;MQSB=0.942869;RPB=0.809357;SGB=112.373;VDB=0.942691;EFF=INTERGENIC(MODIFIER||||||||||1) FN-177.SNP.6:29003482 chr06:029003482 0 W/29003482-29003482 FN-177 Single Base Substitution A-G UTR_5_PRIME HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN2383.SNP.6:29004765 chr06:029004765 0 W/29004765-29004765 FN2383 SNP G -> A AC=2;AN=192;BQB=0.9936;DP=5028;DP4=2391,2394,11,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.07203e-16;MQSB=0.977263;RPB=0.588456;SGB=67.3792;VDB=0.153942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.6:29005896 chr06:029005896 0 W/29005896-29005896 FN2383 SNP A -> G AC=2;AN=192;BQB=0.828814;DP=5044;DP4=2259,2482,18,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.69154e-22;MQSB=0.00933584;RPB=0.310597;SGB=195.27;VDB=0.236264;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.6:29011424 chr06:029011424 0 W/29011424-29011424 FN427-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3913-S.SNP.6:29011517 chr06:029011517 0 W/29011517-29011517 FN3913-S SNP A -> T AC=1;AN=158;BQB=0.561659;DP=2430;DP4=922,1320,11,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.017e-06;MQSB=0.991733;RPB=0.838612;SGB=21.4493;VDB=0.640822;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctA|L23|174|LOC_Os06g47980|protein_coding|CODING|LOC_Os06g47980.1|1|1) FN3661-S.SNP.6:29023885 chr06:029023885 0 W/29023885-29023885 FN3661-S SNP G -> A AC=1;AN=190;BQB=0.980419;DP=3237;DP4=1641,1432,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.44672e-11;MQSB=0.933263;RPB=0.305705;SGB=33.8752;VDB=0.683616;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.6:29025112 chr06:029025112 0 W/29025112-29025112 FN4304-S SNP G -> A AC=1;AN=170;BQB=0.997043;DP=2781;DP4=1405,1234,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.24987e-08;MQSB=0.964898;RPB=0.110325;SGB=38.3207;VDB=0.187874;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.6:29025126 chr06:029025126 0 W/29025126-29025126 FN3479-S SNP C -> A AC=2;AN=184;BQB=0.961998;DP=3607;DP4=1930,1541,20,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.9962e-14;MQSB=0.814395;RPB=0.977141;SGB=130.135;VDB=0.531261;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.6:29036691 chr06:029036691 0 W/29036691-29036691 FN-259 Single Base Substitution A-G INTRON HOMO SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN3714-S.SNP.6:29040600 chr06:029040600 0 W/29040600-29040600 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.742633;DP=2706;DP4=1195,1403,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.51356e-08;MQSB=0.000749037;RPB=0.748014;SGB=21.1058;VDB=0.16116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.6:29045150 chr06:029045150 0 W/29045150-29045150 FN3750-S SNP A -> G AC=1;AN=190;BQB=0.985581;DP=3021;DP4=1364,1496,16,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27563e-10;MQSB=0.305885;RPB=0.58392;SGB=57.4238;VDB=0.946497;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.6:29049402 chr06:029049402 0 W/29049402-29049402 FN928-S Single Base Substitution T-C INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3433-S.SNP.6:29057990 chr06:029057990 0 W/29057990-29057990 FN3433-S SNP C -> T AC=2;AN=184;BQB=0.16586;DP=2426;DP4=1243,1125,11,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.3387e-07;MQSB=0.992513;RPB=0.915865;SGB=80.3949;VDB=0.169416;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.6:29062421 chr06:029062421 0 W/29062421-29062421 FN467-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2597-S.SNP.6:29064918 chr06:029064918 0 W/29064918-29064918 FN2597-S SNP T -> A AC=1;AN=198;BQB=0.99904;DP=4134;DP4=1935,2023,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.16877e-10;MQSB=0.889455;RPB=0.544416;SGB=77.1196;VDB=0.489292;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.6:29066343 chr06:029066343 0 W/29066343-29066343 FN2724-S SNP T -> A AC=1;AN=200;BQB=0.902902;DP=5117;DP4=2352,2514,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.90122e-16;MQSB=0.992857;RPB=0.997831;SGB=94.3471;VDB=0.699906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.6:29073340 chr06:029073340 0 W/29073340-29073340 FN2390 SNP A -> C AC=2;AN=200;BQB=0.95359;DP=4801;DP4=2355,2092,24,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.93141e-15;MQSB=0.101417;RPB=0.945656;SGB=144.819;VDB=0.211745;EFF=INTRON(MODIFIER||||346|LOC_Os06g48060|protein_coding|CODING|LOC_Os06g48060.1|2|1) FN477-S.SNP.6:29080753 chr06:029080753 0 W/29080753-29080753 FN477-S Single Base Substitution A-T INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1186-S.SNP.6:29081155 chr06:029081155 0 W/29081155-29081155 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN3302-S.SNP.6:29084861 chr06:029084861 0 W/29084861-29084861 FN3302-S SNP T -> A AC=1;AN=184;BQB=0.992652;DP=3334;DP4=1645,1572,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00119976;MQB=5.07989e-06;MQSB=0.699849;RPB=0.998807;SGB=32.2261;VDB=0.283895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.6:29084919 chr06:029084919 0 W/29084919-29084919 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.287815;DP=5054;DP4=2565,2200,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0015829;MQB=3.64942e-14;MQSB=0.927478;RPB=0.87509;SGB=83.5316;VDB=0.331705;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.6:29088630 chr06:029088630 0 W/29088630-29088630 FN448-S Single Base Substitution T-A INTRON HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2471.SNP.6:29090862 chr06:029090862 0 W/29090862-29090862 FN2471 SNP C -> T AC=2;AN=200;BQB=0.609812;DP=2981;DP4=1255,1484,11,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=8.69119e-16;MQSB=0.991386;RPB=0.340998;SGB=146.368;VDB=0.654749;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.6:29091126 chr06:029091126 0 W/29091126-29091126 FN1423-S Single Base Substitution G-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4304-S.SNP.6:29094047 chr06:029094047 0 W/29094047-29094047 FN4304-S SNP G -> A AC=1;AN=170;BQB=0.724047;DP=3471;DP4=1666,1691,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0383175;MQB=0.297171;MQSB=3.36312e-18;RPB=0.555098;SGB=43.4296;VDB=0.201873;EFF=INTRON(MODIFIER||||364|LOC_Os06g48080|protein_coding|CODING|LOC_Os06g48080.1|1|1) W470-2-1.SNP.6:29094575 chr06:029094575 0 W/29094575-29094575 W470-2-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g48080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN4123-S.SNP.6:29094621 chr06:029094621 0 W/29094621-29094621 FN4123-S SNP A -> G AC=1;AN=182;BQB=0.955869;DP=3149;DP4=811,2271,4,16;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.00603366;MQB=0.0054989;MQSB=1.33728e-11;RPB=0.999227;SGB=84.7091;VDB=0.481389;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E317G|364|LOC_Os06g48080|protein_coding|CODING|LOC_Os06g48080.1|2|1) FN3460-S.SNP.6:29109989 chr06:029109989 0 W/29109989-29109989 FN3460-S SNP G -> A AC=2;AN=184;BQB=0.938383;DP=2821;DP4=1132,1560,10,12;HOB=0.0215028;ICB=0.494625;MQ=19;MQ0F=0.349876;MQB=0.131462;MQSB=0;RPB=0.40183;SGB=93.9603;VDB=0.0380618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.6:29112019 chr06:029112019 0 W/29112019-29112019 FN3678-S SNP G -> T AC=1;AN=190;BQB=0.999991;DP=2735;DP4=1338,1305,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.134918;MQB=0.861828;MQSB=1.19573e-30;RPB=0.741558;SGB=80.9724;VDB=0.925057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L1200I|1504|LOC_Os06g48110|protein_coding|CODING|LOC_Os06g48110.1|1|1) FN3797-S.SNP.6:29117040 chr06:029117040 0 W/29117040-29117040 FN3797-S SNP T -> C AC=1;AN=188;BQB=0.910937;DP=2481;DP4=1304,1009,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00120919;MQB=3.20979e-05;MQSB=0.00231104;RPB=0.486442;SGB=13.4442;VDB=0.768076;EFF=INTRON(MODIFIER||||348|LOC_Os06g48120|protein_coding|CODING|LOC_Os06g48120.1|1|1) FN3509-S.SNP.6:29123003 chr06:029123003 0 W/29123003-29123003 FN3509-S SNP T -> A AC=1;AN=188;BQB=0.824118;DP=3182;DP4=1360,1641,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.40294e-09;MQSB=0.554672;RPB=0.4838;SGB=62.6088;VDB=0.112958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q357H|837|LOC_Os06g48140|protein_coding|CODING|LOC_Os06g48140.1|2|1) FN3707-S.SNP.6:29123428 chr06:029123428 0 W/29123428-29123428 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.999255;DP=2801;DP4=1374,1275,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00642628;MQB=1.26572e-08;MQSB=0.913229;RPB=0.654675;SGB=46.7622;VDB=0.0409749;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L216|837|LOC_Os06g48140|protein_coding|CODING|LOC_Os06g48140.1|2|1) FN-192.SNP.6:29131616 chr06:029131616 0 W/29131616-29131616 FN-192 Single Base Substitution G-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN467-S.SNP.6:29131662 chr06:029131662 0 W/29131662-29131662 FN467-S Single Base Substitution C-T INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN1452-S.SNP.6:29131839 chr06:029131839 0 W/29131839-29131839 FN1452-S Single Base Substitution G-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1737-S.SNP.6:29131839 chr06:029131839 0 W/29131839-29131839 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.955895;DP=3163;DP4=1399,1700,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.20268e-15;MQSB=0.999066;RPB=0.978915;SGB=54.0524;VDB=0.0916769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.6:29131839 chr06:029131839 0 W/29131839-29131839 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.991731;DP=2463;DP4=1221,1168,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05535e-10;MQSB=0.999864;RPB=0.859046;SGB=57.244;VDB=0.988259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.6:29134383 chr06:029134383 0 W/29134383-29134383 FN1089-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN3286-S.SNP.6:29135124 chr06:029135124 0 W/29135124-29135124 FN3286-S SNP G -> T AC=1;AN=184;BQB=0.999986;DP=3105;DP4=1486,1464,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30046e-12;MQSB=0.977248;RPB=0.201607;SGB=60.4004;VDB=0.542123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.6:29141468 chr06:029141468 0 W/29141468-29141468 FN2458 SNP G -> A AC=1;AN=200;BQB=0.737777;DP=4885;DP4=2467,2171,16,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.51586e-10;MQSB=0.892829;RPB=0.434267;SGB=58.1418;VDB=0.874789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.6:29144214 chr06:029144214 0 W/29144214-29144214 FN1667-S SNP T -> A AC=1;AN=188;BQB=0.000277166;DP=3832;DP4=1613,2101,12,30;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.78026e-07;MQSB=0.980049;RPB=0.531388;SGB=-792.019;VDB=0.105936;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.6:29144215 chr06:029144215 0 W/29144215-29144215 FN1667-S SNP C -> A AC=1;AN=188;BQB=0.00258539;DP=3858;DP4=1626,2109,13,27;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97926e-07;MQSB=0.959375;RPB=0.205993;SGB=-580.954;VDB=0.30195;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.6:29157216 chr06:029157216 0 W/29157216-29157216 FN527-S Single Base Substitution G-A INTRON HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-26.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN-26 Single Base Substitution C-T INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN1212-S.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN1212-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3512-S.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN3512-S SNP C -> T AC=2;AN=188;BQB=0.958117;DP=2608;DP4=1121,1405,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.78496e-16;MQSB=0.802422;RPB=0.958154;SGB=117.128;VDB=0.845418;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN437-S Single Base Substitution C-T INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN_789-2-1.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN_789-2-1 Single Base Substitution C-T HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-3-1.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 FN_789-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. W246-5-1.SNP.6:29159055 chr06:029159055 0 W/29159055-29159055 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2254-S.SNP.6:29169784 chr06:029169784 0 W/29169784-29169784 FN2254-S SNP A -> G AC=1;AN=190;BQB=0.0791128;DP=5256;DP4=2332,2596,5,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000380518;MQB=4.008e-10;MQSB=0.401957;RPB=0.407187;SGB=46.6446;VDB=0.866433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.6:29176171 chr06:029176171 0 W/29176171-29176171 FN1064-S Single Base Substitution G-A INTRON HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1064-S.SNP.6:29176172 chr06:029176172 0 W/29176172-29176172 FN1064-S Single Base Substitution G-A INTRON HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2472.SNP.6:29178210 chr06:029178210 0 W/29178210-29178210 FN2472 SNP T -> C AC=1;AN=200;BQB=0.933738;DP=5077;DP4=2460,2423,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.08709e-16;MQSB=0.980719;RPB=0.772292;SGB=87.1368;VDB=0.439001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.6:29182658 chr06:029182658 0 W/29182658-29182658 FN2338 SNP A -> G AC=1;AN=192;BQB=0.968289;DP=5058;DP4=2434,2253,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.72021e-16;MQSB=0.83564;RPB=0.9999;SGB=82.5522;VDB=0.907266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.6:29185188 chr06:029185188 0 W/29185188-29185188 FN2109-S SNP C -> T AC=2;AN=168;BQB=0.706971;DP=2018;DP4=920,1033,9,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.95018e-08;MQSB=0.934375;RPB=0.191559;SGB=31.908;VDB=0.0282391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V312I|504|LOC_Os06g48250|protein_coding|CODING|LOC_Os06g48250.1|1|1) W416-6-1.SNP.6:29185730 chr06:029185730 0 W/29185730-29185730 W416-6-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g48250 ATPase, putative, expressed SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2202-S.SNP.6:29190856 chr06:029190856 0 W/29190856-29190856 FN2202-S SNP G -> T AC=1;AN=190;BQB=0.765119;DP=3952;DP4=2161,1582,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.35729e-05;MQSB=0.967939;RPB=0.860697;SGB=30.8803;VDB=0.146847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C85F|145|LOC_Os06g48270|protein_coding|CODING|LOC_Os06g48270.1|2|1) FN3771-S.SNP.6:29191968 chr06:029191968 0 W/29191968-29191968 FN3771-S SNP T -> G AC=1;AN=190;BQB=0.69767;DP=2798;DP4=1385,1223,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000135961;MQSB=0.958066;RPB=0.983495;SGB=32.5467;VDB=0.881738;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.6:29192034 chr06:029192034 0 W/29192034-29192034 FN758-S Single Base Substitution C-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN1113-S.SNP.6:29192966 chr06:029192966 0 W/29192966-29192966 FN1113-S Single Base Substitution A-G INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2598-S.SNP.6:29193529 chr06:029193529 0 W/29193529-29193529 FN2598-S SNP G -> C AC=1;AN=198;BQB=0.242444;DP=3857;DP4=1759,1892,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.73855e-11;MQSB=0.845947;RPB=0.791814;SGB=50.9344;VDB=0.696591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-29.SNP.6:29200626 chr06:029200626 0 W/29200626-29200626 FN-29 Single Base Substitution A-C INTERGENIC Homo SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN421-S.SNP.6:29213894 chr06:029213894 0 W/29213894-29213894 FN421-S Single Base Substitution C-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1011-S.SNP.6:29214001 chr06:029214001 0 W/29214001-29214001 FN1011-S Single Base Substitution T-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1152-S.SNP.6:29215261 chr06:029215261 0 W/29215261-29215261 FN1152-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2123-S.SNP.6:29217891 chr06:029217891 0 W/29217891-29217891 FN2123-S SNP C -> A AC=1;AN=168;BQB=0.519701;DP=2550;DP4=1029,1460,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.58123e-09;MQSB=0.835187;RPB=0.804044;SGB=74.3269;VDB=0.60582;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G323|328|LOC_Os06g48320|protein_coding|CODING|LOC_Os06g48320.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G323|329|LOC_Os06g48320|protein_coding|CODING|LOC_Os06g48320.1|2|1) FN1136-19-S.SNP.6:29223883 chr06:029223883 0 W/29223883-29223883 FN1136-19-S Single Base Substitution C-T INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3297-S.SNP.6:29224750 chr06:029224750 0 W/29224750-29224750 FN3297-S SNP A -> G AC=2;AN=184;BQB=0.797766;DP=3055;DP4=1609,1259,20,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000327332;MQB=2.2661e-13;MQSB=0.965378;RPB=0.573998;SGB=106.184;VDB=0.423672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.6:29225553 chr06:029225553 0 W/29225553-29225553 FN1721-S SNP C -> T AC=1;AN=188;BQB=0.0855374;DP=3801;DP4=1755,2020,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.6864e-05;MQSB=0.96506;RPB=0.935326;SGB=-16.0863;VDB=0.413893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.6:29227561 chr06:029227561 0 W/29227561-29227561 FN3637-S SNP C -> A AC=1;AN=190;BQB=0.572831;DP=2459;DP4=1097,1270,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.44312e-05;MQSB=0.969177;RPB=0.995944;SGB=49.0954;VDB=0.981685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.6:29240744 chr06:029240744 0 W/29240744-29240744 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.0543282;DP=5467;DP4=2568,2433,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69578e-11;MQSB=0.965647;RPB=0.959142;SGB=22.3313;VDB=0.588829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.6:29307429 chr06:029307429 0 W/29307429-29307429 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.497851;DP=4759;DP4=2267,2265,11,3;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0533726;MQB=0.961608;MQSB=7.57746e-13;RPB=0.14314;SGB=21.6694;VDB=0.0168688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D1038E|1535|LOC_Os06g48440|protein_coding|CODING|LOC_Os06g48440.1|2|1) FN1153-S.SNP.6:29328992 chr06:029328992 0 W/29328992-29328992 FN1153-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g48480 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3801-S.SNP.6:29345455 chr06:029345455 0 W/29345455-29345455 FN3801-S SNP A -> G AC=1;AN=190;BQB=0.986737;DP=2863;DP4=1398,1386,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.08316e-08;MQSB=0.992042;RPB=0.950247;SGB=49.0954;VDB=0.564756;EFF=INTERGENIC(MODIFIER||||||||||1) FN853-S.SNP.6:29346328 chr06:029346328 0 W/29346328-29346328 FN853-S Single Base Substitution C-T INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN2423.SNP.6:29347595 chr06:029347595 0 W/29347595-29347595 FN2423 SNP C -> T AC=1;AN=200;BQB=0.631084;DP=4615;DP4=1889,2440,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08497e-13;MQSB=0.994455;RPB=0.969757;SGB=42.5108;VDB=0.522035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.6:29349724 chr06:029349724 0 W/29349724-29349724 FN2130-S SNP T -> A AC=1;AN=168;BQB=0.0100694;DP=4094;DP4=2047,2001,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20602e-11;MQSB=0.981106;RPB=0.977125;SGB=-130.056;VDB=0.740849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|L155Q|410|LOC_Os06g48510|protein_coding|CODING|LOC_Os06g48510.1|4|1) FN2432.SNP.6:29351473 chr06:029351473 0 W/29351473-29351473 FN2432 SNP T -> A AC=1;AN=200;BQB=0.894889;DP=4922;DP4=2452,2263,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6266e-10;MQSB=0.99399;RPB=0.928886;SGB=68.0801;VDB=0.360223;EFF=INTRON(MODIFIER||||410|LOC_Os06g48510|protein_coding|CODING|LOC_Os06g48510.1|9|1) FN3850-S.SNP.6:29351475 chr06:029351475 0 W/29351475-29351475 FN3850-S SNP A -> T AC=1;AN=158;BQB=0.966236;DP=2207;DP4=1133,986,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.60696e-09;MQSB=0.93519;RPB=0.955818;SGB=55.806;VDB=0.167284;EFF=INTRON(MODIFIER||||410|LOC_Os06g48510|protein_coding|CODING|LOC_Os06g48510.1|9|1) FN-257.SNP.6:29353189 chr06:029353189 0 W/29353189-29353189 FN-257 Single Base Substitution T-G INTRON HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3479-S.SNP.6:29354866 chr06:029354866 0 W/29354866-29354866 FN3479-S SNP A -> T AC=2;AN=184;BQB=0.822306;DP=2895;DP4=1537,1246,15,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.80098e-17;MQSB=0.926732;RPB=0.913337;SGB=56.0583;VDB=0.586159;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L243*|744|LOC_Os06g48520|protein_coding|CODING|LOC_Os06g48520.1|3|1);LOF=(LOC_Os06g48520|LOC_Os06g48520|1|1.00);NMD=(LOC_Os06g48520|LOC_Os06g48520|1|1.00) FN3479-S.SNP.6:29354867 chr06:029354867 0 W/29354867-29354867 FN3479-S SNP A -> T AC=2;AN=184;BQB=0.968503;DP=2887;DP4=1509,1261,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.09566e-16;MQSB=0.863629;RPB=0.764813;SGB=85.0529;VDB=0.737046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L243I|744|LOC_Os06g48520|protein_coding|CODING|LOC_Os06g48520.1|3|1) FN3479-S.SNP.6:29354868 chr06:029354868 0 W/29354868-29354868 FN3479-S SNP G -> T AC=2;AN=184;BQB=0.970767;DP=2893;DP4=1543,1251,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19025e-17;MQSB=0.901722;RPB=0.969691;SGB=85.0529;VDB=0.485571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S242R|744|LOC_Os06g48520|protein_coding|CODING|LOC_Os06g48520.1|3|1) FN2664-S.SNP.6:29357890 chr06:029357890 0 W/29357890-29357890 FN2664-S SNP G -> C AC=1;AN=200;BQB=0.438266;DP=5126;DP4=2214,2577,13,31;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.96164e-26;MQSB=0.958538;RPB=0.986591;SGB=99.8245;VDB=0.159835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A710G|723|LOC_Os06g48530|protein_coding|CODING|LOC_Os06g48530.1|12|1) FN347-S.SNP.6:29360819 chr06:029360819 0 W/29360819-29360819 FN347-S Single Base Substitution T-A INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1535-S.SNP.6:29360930 chr06:029360930 0 W/29360930-29360930 FN1535-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os06g48530 ZOS6-09 - C2H2 zinc finger protein, expressed SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN-226.SNP.6:29367041 chr06:029367041 0 W/29367041-29367041 FN-226 Single Base Substitution T-A INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3774-S.SNP.6:29373434 chr06:029373434 0 W/29373434-29373434 FN3774-S SNP A -> T AC=1;AN=190;BQB=0.870765;DP=2326;DP4=1226,1015,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20419e-09;MQSB=0.996405;RPB=0.793017;SGB=67.3108;VDB=0.787351;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.6:29380150 chr06:029380150 0 W/29380150-29380150 FN-278 Single Base Substitution G-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2670-S.SNP.6:29380851 chr06:029380851 0 W/29380851-29380851 FN2670-S SNP C -> A AC=1;AN=200;BQB=0.611057;DP=4958;DP4=2328,2195,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.02901e-18;MQSB=0.861447;RPB=0.898265;SGB=33.5675;VDB=0.824629;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.6:29388123 chr06:029388123 0 W/29388123-29388123 FN_798-4-2 Single Base Substitution T-A Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN2555-S.SNP.6:29397168 chr06:029397168 0 W/29397168-29397168 FN2555-S SNP A -> G AC=1;AN=198;BQB=0.908189;DP=4325;DP4=2174,1954,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.30081e-06;MQSB=0.727039;RPB=0.464095;SGB=40.3588;VDB=0.805428;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.6:29400240 chr06:029400240 0 W/29400240-29400240 FN4070-S SNP C -> T AC=2;AN=182;BQB=0.996293;DP=2668;DP4=1416,1143,19,25;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.24837e-27;MQSB=0.943074;RPB=0.999032;SGB=187.503;VDB=0.490562;EFF=INTRON(MODIFIER||||369|LOC_Os06g48590|protein_coding|CODING|LOC_Os06g48590.1|2|1),INTRON(MODIFIER||||369|LOC_Os06g48590|protein_coding|CODING|LOC_Os06g48590.2|2|1) FN1492-S.SNP.6:29407138 chr06:029407138 0 W/29407138-29407138 FN1492-S Single Base Substitution A-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1320-S.SNP.6:29420836 chr06:029420836 0 W/29420836-29420836 FN1320-S Single Base Substitution C-G INTRON HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.6:29424944 chr06:029424944 0 W/29424944-29424944 FN1355-S Single Base Substitution G-A INTRON HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4051-S.SNP.6:29432490 chr06:029432490 0 W/29432490-29432490 FN4051-S SNP C -> T AC=1;AN=168;BQB=0.884036;DP=3093;DP4=1419,1557,4,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85518e-11;MQSB=0.982523;RPB=0.796753;SGB=69.8961;VDB=0.155244;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.6:29432491 chr06:029432491 0 W/29432491-29432491 FN4051-S SNP G -> T AC=1;AN=168;BQB=0.999615;DP=3098;DP4=1412,1552,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.17636e-12;MQSB=0.998464;RPB=0.914629;SGB=74.3269;VDB=0.176961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.6:29433147 chr06:029433147 0 W/29433147-29433147 FN1330-S Single Base Substitution C-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN-232.SNP.6:29433644 chr06:029433644 0 W/29433644-29433644 FN-232 Single Base Substitution A-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN527-S.SNP.6:29438362 chr06:029438362 0 W/29438362-29438362 FN527-S Single Base Substitution G-A INTRON HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1281-S.SNP.6:29439212 chr06:029439212 0 W/29439212-29439212 FN1281-S Single Base Substitution T-G INTRON HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2625-S.SNP.6:29443573 chr06:029443573 0 W/29443573-29443573 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.991012;DP=5227;DP4=2485,2516,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.46816e-15;MQSB=0.981005;RPB=0.827925;SGB=79.9264;VDB=0.320531;EFF=UTR_3_PRIME(MODIFIER||476||476|LOC_Os06g48660|protein_coding|CODING|LOC_Os06g48660.1|1|1),INTRON(MODIFIER||||94|LOC_Os06g48665|protein_coding|CODING|LOC_Os06g48665.1|1|1) FN2599-S.SNP.6:29445402 chr06:029445402 0 W/29445402-29445402 FN2599-S SNP T -> C AC=1;AN=198;BQB=0.961304;DP=4318;DP4=2166,1915,20,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.7665e-19;MQSB=0.952651;RPB=0.779868;SGB=65.676;VDB=0.965906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.6:29446010 chr06:029446010 0 W/29446010-29446010 FN-296 Single Base Substitution C-T INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN2372.SNP.6:29451965 chr06:029451965 0 W/29451965-29451965 FN2372 SNP A -> G AC=1;AN=192;BQB=0.539752;DP=4999;DP4=2733,1994,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.27529e-08;MQSB=0.990023;RPB=0.916286;SGB=46.9087;VDB=0.861521;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.6:29454463 chr06:029454463 0 W/29454463-29454463 FN-329 Single Base Substitution G-A INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-129.SNP.6:29455429 chr06:029455429 0 W/29455429-29455429 FN-129 Single Base Substitution C-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3852-S.SNP.6:29458648 chr06:029458648 0 W/29458648-29458648 FN3852-S SNP T -> G AC=1;AN=158;BQB=0.909829;DP=2499;DP4=1146,1235,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.45776e-09;MQSB=0.994594;RPB=0.986228;SGB=23.8187;VDB=0.639777;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.6:29462084 chr06:029462084 0 W/29462084-29462084 FN630-S Single Base Substitution G-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2278-S.SNP.6:29462988 chr06:029462988 0 W/29462988-29462988 FN2278-S SNP T -> C AC=2;AN=190;BQB=0.667406;DP=4893;DP4=2307,2150,23,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14513e-25;MQSB=0.34902;RPB=0.784111;SGB=171.148;VDB=0.0657532;EFF=INTRON(MODIFIER||||372|LOC_Os06g48700|protein_coding|CODING|LOC_Os06g48700.1|10|1) FN909-S.SNP.6:29468396 chr06:029468396 0 W/29468396-29468396 FN909-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g48710 transposon protein, putative, unclassified SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2563-S.SNP.6:29470885 chr06:029470885 0 W/29470885-29470885 FN2563-S SNP T -> A AC=1;AN=198;BQB=0.995277;DP=3773;DP4=1628,1705,1,6;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0045057;MQB=0.435771;MQSB=1.28986e-20;RPB=0.676219;SGB=14.9842;VDB=0.170074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.6:29471470 chr06:029471470 0 W/29471470-29471470 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.00894439;DP=3583;DP4=2366,1149,21,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000279096;MQB=3.45213e-09;MQSB=0.770033;RPB=0.730328;SGB=-216.752;VDB=0.244955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.6:29473021 chr06:029473021 0 W/29473021-29473021 FN3610-S SNP T -> G AC=1;AN=190;BQB=0.854906;DP=2798;DP4=1317,1351,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.39082e-09;MQSB=0.809951;RPB=0.71073;SGB=46.7622;VDB=0.0405784;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.6:29474693 chr06:029474693 0 W/29474693-29474693 FN-86 Single Base Substitution G-A INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN2753-S.SNP.6:29479680 chr06:029479680 0 W/29479680-29479680 FN2753-S SNP T -> C AC=1;AN=200;BQB=0.996879;DP=4933;DP4=2303,2352,19,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.24798e-19;MQSB=0.967629;RPB=0.83532;SGB=38.383;VDB=0.854775;EFF=INTRON(MODIFIER||||156|LOC_Os06g48720|protein_coding|CODING|LOC_Os06g48720.1|2|1) FN1438-S.SNP.6:29486932 chr06:029486932 0 W/29486932-29486932 FN1438-S Single Base Substitution G-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3364-S.SNP.6:29486981 chr06:029486981 0 W/29486981-29486981 FN3364-S SNP T -> A AC=1;AN=184;BQB=0.430234;DP=2360;DP4=978,1301,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.64868e-05;MQSB=0.986455;RPB=0.712096;SGB=21.6609;VDB=0.836981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.6:29494900 chr06:029494900 0 W/29494900-29494900 FN3555-S SNP C -> G AC=1;AN=188;BQB=0.865123;DP=2413;DP4=1206,1141,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.34088e-11;MQSB=0.881262;RPB=0.60404;SGB=67.8739;VDB=0.496307;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.6:29495539 chr06:029495539 0 W/29495539-29495539 FN763-S Single Base Substitution G-T INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2620-S.SNP.6:29496280 chr06:029496280 0 W/29496280-29496280 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.703082;DP=4745;DP4=2424,2022,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.50505e-13;MQSB=0.993913;RPB=0.46833;SGB=44.9151;VDB=0.183553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.6:29497155 chr06:029497155 0 W/29497155-29497155 FN3525-S SNP T -> A AC=1;AN=188;BQB=0.801136;DP=3152;DP4=1688,1358,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26162e-06;MQSB=0.712504;RPB=0.500701;SGB=25.3545;VDB=0.0905794;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.6:29497155 chr06:029497155 0 W/29497155-29497155 FN_N1-213-1 Single Base Substitution T-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1150-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN1150-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1335-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN1335-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1647-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN1647-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1692-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN1692-S SNP G -> A AC=2;AN=188;BQB=0.428174;DP=3423;DP4=1672,1705,12,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91484e-13;MQSB=0.992341;RPB=0.953162;SGB=22.5144;VDB=0.665509;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN2220-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN2220-S SNP G -> A AC=2;AN=190;BQB=0.549765;DP=4902;DP4=2133,2347,28,40;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.52845e-35;MQSB=0.985754;RPB=0.958054;SGB=231.564;VDB=0.629105;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN2589-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.953272;DP=4374;DP4=1984,2120,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19277e-09;MQSB=0.888613;RPB=0.96315;SGB=7.75428;VDB=0.871724;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN3105-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN3105-S SNP G -> A AC=2;AN=184;BQB=0.884306;DP=3142;DP4=1398,1622,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.48648e-14;MQSB=0.993842;RPB=0.817214;SGB=130.135;VDB=0.375298;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN4135-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN4135-S SNP G -> A AC=1;AN=182;BQB=0.914573;DP=3343;DP4=1523,1710,15,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.74427e-15;MQSB=0.927866;RPB=0.395426;SGB=111.774;VDB=0.0326598;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN4240-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN4240-S SNP G -> A AC=1;AN=170;BQB=0.998334;DP=2745;DP4=1183,1463,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07312e-09;MQSB=0.853362;RPB=0.802965;SGB=70.0854;VDB=0.470013;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T94|414|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T49|369|LOC_Os06g48750|protein_coding|CODING|LOC_Os06g48750.3|3|1) FN821-S.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN821-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN_829-2-5.SNP.6:29505563 chr06:029505563 0 W/29505563-29505563 FN_829-2-5 Single Base Substitution G-A HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN-296.SNP.6:29506023 chr06:029506023 0 W/29506023-29506023 FN-296 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN3417-S.SNP.6:29512619 chr06:029512619 0 W/29512619-29512619 FN3417-S SNP A -> T AC=1;AN=184;BQB=0.756752;DP=2157;DP4=993,1060,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25564e-05;MQSB=0.945146;RPB=0.766324;SGB=25.1826;VDB=0.73483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F202Y|616|LOC_Os06g48760|protein_coding|CODING|LOC_Os06g48760.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F202Y|526|LOC_Os06g48760|protein_coding|CODING|LOC_Os06g48760.2|6|1) FN689-S.SNP.6:29516187 chr06:029516187 0 W/29516187-29516187 FN689-S Single Base Substitution T-C INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN4046-S.SNP.6:29516861 chr06:029516861 0 W/29516861-29516861 FN4046-S SNP C -> G AC=2;AN=168;BQB=0.743185;DP=2985;DP4=1524,1338,21,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.77399e-18;MQSB=0.853158;RPB=0.684867;SGB=31.3762;VDB=0.272737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G829R|918|LOC_Os06g48770|protein_coding|CODING|LOC_Os06g48770.2|19|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Cgg|G859R|948|LOC_Os06g48770|protein_coding|CODING|LOC_Os06g48770.1|19|1) FN4093-S.SNP.6:29521653 chr06:029521653 0 W/29521653-29521653 FN4093-S SNP A -> C AC=2;AN=182;BQB=0.93466;DP=2819;DP4=1436,1305,17,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.83648e-15;MQSB=0.978775;RPB=0.556523;SGB=81.2689;VDB=0.962297;EFF=INTRON(MODIFIER||||948|LOC_Os06g48770|protein_coding|CODING|LOC_Os06g48770.1|7|1),INTRON(MODIFIER||||918|LOC_Os06g48770|protein_coding|CODING|LOC_Os06g48770.2|7|1) FN1461-S.SNP.6:29524062 chr06:029524062 0 W/29524062-29524062 FN1461-S Single Base Substitution C-T INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2352.SNP.6:29524171 chr06:029524171 0 W/29524171-29524171 FN2352 SNP T -> G AC=1;AN=192;BQB=0.976475;DP=4794;DP4=2559,1833,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.70645e-09;MQSB=0.946866;RPB=0.920831;SGB=50.4731;VDB=0.144951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.6:29530613 chr06:029530613 0 W/29530613-29530613 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.480724;DP=2243;DP4=1420,782,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.99002e-05;MQSB=0.96926;RPB=0.250491;SGB=-17.0958;VDB=0.873613;EFF=INTRON(MODIFIER||||643|LOC_Os06g48790|protein_coding|CODING|LOC_Os06g48790.1|1|1) FN2351.SNP.6:29532248 chr06:029532248 0 W/29532248-29532248 FN2351 SNP T -> C AC=2;AN=192;BQB=0.565953;DP=4947;DP4=2608,1983,29,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000202143;MQB=1.36001e-23;MQSB=0.856491;RPB=0.966809;SGB=150.275;VDB=0.0479773;EFF=INTRON(MODIFIER||||643|LOC_Os06g48790|protein_coding|CODING|LOC_Os06g48790.1|3|1) FN2252-S.SNP.6:29537278 chr06:029537278 0 W/29537278-29537278 FN2252-S SNP G -> A AC=1;AN=190;BQB=0.845423;DP=5057;DP4=2319,2344,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.99038e-06;MQSB=0.929623;RPB=0.964154;SGB=46.7622;VDB=0.979807;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.6:29545933 chr06:029545933 0 W/29545933-29545933 FN2630-S SNP T -> A AC=1;AN=200;BQB=0.974175;DP=5100;DP4=2169,2736,10,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00031e-17;MQSB=0.999669;RPB=0.640727;SGB=58.1418;VDB=0.717445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.6:29546671 chr06:029546671 0 W/29546671-29546671 FN2596-S SNP C -> G AC=1;AN=198;BQB=0.832154;DP=3764;DP4=1872,1715,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15742e-07;MQSB=0.791587;RPB=0.205693;SGB=24.1541;VDB=0.330159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.6:29553313 chr06:029553313 0 W/29553313-29553313 FN2627-S SNP C -> T AC=2;AN=200;BQB=0.106902;DP=4519;DP4=1686,2174,25,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31485e-20;MQSB=0.948854;RPB=0.999833;SGB=-294.372;VDB=0.130987;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.6:29569184 chr06:029569184 0 W/29569184-29569184 FN3363-S SNP A -> T AC=2;AN=184;BQB=0.983161;DP=2193;DP4=1518,606,21,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.55454e-15;MQSB=0.232196;RPB=0.31399;SGB=88.5747;VDB=0.159356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.6:29569577 chr06:029569577 0 W/29569577-29569577 FN1085-S Single Base Substitution G-A INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2630-S.SNP.6:29570307 chr06:029570307 0 W/29570307-29570307 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.842354;DP=4786;DP4=2330,2151,10,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.6725e-07;MQSB=0.286593;RPB=0.658075;SGB=61.9006;VDB=0.518611;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.6:29574444 chr06:029574444 0 W/29574444-29574444 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN-364.SNP.6:29578249 chr06:029578249 0 W/29578249-29578249 FN-364 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3388-S.SNP.6:29588364 chr06:029588364 0 W/29588364-29588364 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.408282;DP=2860;DP4=1424,1290,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13512e-09;MQSB=0.971168;RPB=0.480099;SGB=67.4439;VDB=0.0254005;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.6:29594936 chr06:029594936 0 W/29594936-29594936 FN791-S Single Base Substitution C-T INTRON HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3629-S.SNP.6:29595301 chr06:029595301 0 W/29595301-29595301 FN3629-S SNP G -> T AC=1;AN=190;BQB=0.804255;DP=2951;DP4=1546,1305,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.322e-05;MQSB=0.992841;RPB=0.486525;SGB=28.9929;VDB=0.0981849;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E332*|410|LOC_Os06g48870|protein_coding|CODING|LOC_Os06g48870.1|5|1) FN1180-S.SNP.6:29605416 chr06:029605416 0 W/29605416-29605416 FN1180-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os06g48900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN2086-S.SNP.6:29615157 chr06:029615157 0 W/29615157-29615157 FN2086-S SNP G -> A AC=1;AN=168;BQB=0.36912;DP=3528;DP4=1575,1891,16,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.54661e-14;MQSB=0.650806;RPB=0.669963;SGB=-83.76;VDB=0.742944;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.6:29616735 chr06:029616735 0 W/29616735-29616735 FN4153-S SNP T -> A AC=1;AN=170;BQB=0.444932;DP=2566;DP4=1177,1318,5,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.96207e-12;MQSB=0.992115;RPB=0.877723;SGB=34.5398;VDB=0.914494;EFF=INTRON(MODIFIER||||450|LOC_Os06g48920|protein_coding|CODING|LOC_Os06g48920.1|1|1) FN4153-S.SNP.6:29616736 chr06:029616736 0 W/29616736-29616736 FN4153-S SNP G -> C AC=1;AN=170;BQB=0.829108;DP=2565;DP4=1176,1320,5,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0546e-12;MQSB=0.993532;RPB=0.954714;SGB=78.9707;VDB=0.956197;EFF=INTRON(MODIFIER||||450|LOC_Os06g48920|protein_coding|CODING|LOC_Os06g48920.1|1|1) FN581-S.SNP.6:29622658 chr06:029622658 0 W/29622658-29622658 FN581-S Single Base Substitution T-A INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN373-S.SNP.6:29627273 chr06:029627273 0 W/29627273-29627273 FN373-S Single Base Substitution A-T INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2625-S.SNP.6:29641777 chr06:029641777 0 W/29641777-29641777 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.994832;DP=5520;DP4=2590,2591,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000181159;MQB=2.46657e-20;MQSB=0.980903;RPB=0.83577;SGB=105.163;VDB=0.38922;EFF=INTERGENIC(MODIFIER||||||||||1) FN803-S.SNP.6:29644025 chr06:029644025 0 W/29644025-29644025 FN803-S Single Base Substitution G-A INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1268-S.SNP.6:29646252 chr06:029646252 0 W/29646252-29646252 FN1268-S Single Base Substitution C-A INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2361.SNP.6:29647031 chr06:029647031 0 W/29647031-29647031 FN2361 SNP A -> T AC=1;AN=192;BQB=0.0570485;DP=4912;DP4=2224,2472,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.89493e-10;MQSB=0.885304;RPB=0.951539;SGB=82.5522;VDB=0.762563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.6:29649664 chr06:029649664 0 W/29649664-29649664 FN-154 Single Base Substitution A-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. W502-3-4.SNP.6:29650711 chr06:029650711 0 W/29650711-29650711 W502-3-4 Single Base Substitution G-T INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1727-S.SNP.6:29658673 chr06:029658673 0 W/29658673-29658673 FN1727-S SNP C -> T AC=1;AN=188;BQB=0.998616;DP=4090;DP4=2202,1857,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.38437e-09;MQSB=0.970862;RPB=0.949279;SGB=-36.9078;VDB=0.264735;EFF=INTRON(MODIFIER||||1138|LOC_Os06g48950|protein_coding|CODING|LOC_Os06g48950.1|2|1) FN-139.SNP.6:29659268 chr06:029659268 0 W/29659268-29659268 FN-139 Single Base Substitution G-T INTRON HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1416-S.SNP.6:29663981 chr06:029663981 0 W/29663981-29663981 FN1416-S Single Base Substitution T-C INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN_N1-119-1.SNP.6:29670174 chr06:029670174 0 W/29670174-29670174 FN_N1-119-1 Single Base Substitution G-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. W7-1-1.SNP.6:29674518 chr06:029674518 0 W/29674518-29674518 W7-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1112-S.SNP.6:29674921 chr06:029674921 0 W/29674921-29674921 FN1112-S Single Base Substitution A-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN-30.SNP.6:29675802 chr06:029675802 0 W/29675802-29675802 FN-30 Single Base Substitution C-T INTRON Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2218-S.SNP.6:29683841 chr06:029683841 0 W/29683841-29683841 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.725204;DP=4710;DP4=2176,2023,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000212314;MQB=2.82143e-09;MQSB=0.994463;RPB=0.615758;SGB=-34.9861;VDB=0.042745;EFF=INTRON(MODIFIER||||977|LOC_Os06g48990|protein_coding|CODING|LOC_Os06g48990.1|1|1),INTRON(MODIFIER||||977|LOC_Os06g48990|protein_coding|CODING|LOC_Os06g48990.2|1|1) FN770-S.SNP.6:29685794 chr06:029685794 0 W/29685794-29685794 FN770-S Single Base Substitution C-T INTRON HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN4253-S.SNP.6:29697913 chr06:029697913 0 W/29697913-29697913 FN4253-S SNP G -> C AC=2;AN=170;BQB=0.85093;DP=2258;DP4=1032,1161,9,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.05113e-12;MQSB=0.985996;RPB=0.783513;SGB=92.2986;VDB=0.867997;EFF=INTRON(MODIFIER||||811|LOC_Os06g49000|protein_coding|CODING|LOC_Os06g49000.1|2|1),INTRON(MODIFIER||||645|LOC_Os06g49000|protein_coding|CODING|LOC_Os06g49000.2|2|1) FN3937-S.SNP.6:29705458 chr06:029705458 0 W/29705458-29705458 FN3937-S SNP G -> C AC=1;AN=158;BQB=0.946397;DP=2273;DP4=1048,1142,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.61654e-06;MQSB=0.92269;RPB=0.701716;SGB=20.5959;VDB=0.0232864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.3|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.4|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.5|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S327C|475|LOC_Os06g49010|protein_coding|CODING|LOC_Os06g49010.6|6|1) FN1634-S.SNP.6:29709042 chr06:029709042 0 W/29709042-29709042 FN1634-S Single Base Substitution C-T INTERGENIC Homo SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2309.SNP.6:29712177 chr06:029712177 0 W/29712177-29712177 FN2309 SNP T -> C AC=1;AN=192;BQB=0.07332;DP=4823;DP4=2275,2029,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28722e-09;MQSB=0.934043;RPB=0.843576;SGB=26.3496;VDB=0.831558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T97A|308|LOC_Os06g49020|protein_coding|CODING|LOC_Os06g49020.1|1|1) FN-236.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN-236 Single Base Substitution G-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1227-S.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN1227-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1277-S.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN1277-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1286-S.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN1286-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2297.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN2297 SNP G -> A AC=2;AN=192;BQB=0.754218;DP=4752;DP4=1769,2630,15,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.70666e-25;MQSB=0.952111;RPB=0.79355;SGB=93.0226;VDB=0.633691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN3848-S SNP G -> A AC=2;AN=158;BQB=0.798079;DP=1840;DP4=785,946,11,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.00497e-09;MQSB=0.844422;RPB=0.251442;SGB=99.5005;VDB=0.315989;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.6:29717888 chr06:029717888 0 W/29717888-29717888 FN678-S Single Base Substitution G-A INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN1685-S.SNP.6:29719473 chr06:029719473 0 W/29719473-29719473 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.602598;DP=3781;DP4=1828,1923,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25495e-10;MQSB=0.908138;RPB=0.624783;SGB=76.2387;VDB=0.0632176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.6:29734202 chr06:029734202 0 W/29734202-29734202 FN2188-S SNP T -> A AC=1;AN=190;BQB=0.58079;DP=4278;DP4=1972,1910,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.77994e-16;MQSB=0.988414;RPB=0.980283;SGB=67.0756;VDB=0.00211214;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L53H|538|LOC_Os06g49060|protein_coding|CODING|LOC_Os06g49060.1|2|1) FN988-S.SNP.6:29734598 chr06:029734598 0 W/29734598-29734598 FN988-S Single Base Substitution A-T INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_814-7-1.SNP.6:29741821 chr06:029741821 0 W/29741821-29741821 FN_814-7-1 Single Base Substitution G-A HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN4063-S.SNP.6:29752834 chr06:029752834 0 W/29752834-29752834 FN4063-S SNP G -> T AC=1;AN=168;BQB=0.972515;DP=2547;DP4=1298,1140,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.70327e-05;MQSB=0.98593;RPB=0.433631;SGB=34.4498;VDB=0.298589;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.6:29754114 chr06:029754114 0 W/29754114-29754114 FN862-S Single Base Substitution A-G INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2627-S.SNP.6:29754470 chr06:029754470 0 W/29754470-29754470 FN2627-S SNP C -> G AC=2;AN=200;BQB=0.568676;DP=3098;DP4=1077,1823,17,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.84021e-18;MQSB=0.867798;RPB=0.330909;SGB=146.368;VDB=0.000864929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.6:29759457 chr06:029759457 0 W/29759457-29759457 FN3627-S SNP C -> G AC=1;AN=190;BQB=0.437255;DP=2885;DP4=1409,1359,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46247e-08;MQSB=0.98275;RPB=0.352783;SGB=31.3213;VDB=0.455116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K247N|426|LOC_Os06g49110|protein_coding|CODING|LOC_Os06g49110.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K247N|365|LOC_Os06g49110|protein_coding|CODING|LOC_Os06g49110.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K247N|426|LOC_Os06g49110|protein_coding|CODING|LOC_Os06g49110.3|7|1) FN-408.SNP.6:29767541 chr06:029767541 0 W/29767541-29767541 FN-408 Single Base Substitution A-G INTERGENIC HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.6:29767541 chr06:029767541 0 W/29767541-29767541 FN408-S Single Base Substitution A-G INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2115-S.SNP.6:29769119 chr06:029769119 0 W/29769119-29769119 FN2115-S SNP G -> A AC=2;AN=168;BQB=0.336313;DP=4065;DP4=1777,2215,23,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19918e-26;MQSB=0.951925;RPB=0.66647;SGB=-116.713;VDB=0.553102;EFF=INTRON(MODIFIER||||1428|LOC_Os06g49130|protein_coding|CODING|LOC_Os06g49130.1|14|1) FN-408.SNP.6:29771109 chr06:029771109 0 W/29771109-29771109 FN-408 Single Base Substitution A-G INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.6:29771109 chr06:029771109 0 W/29771109-29771109 FN408-S Single Base Substitution A-G INTRON HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-408.SNP.6:29771111 chr06:029771111 0 W/29771111-29771111 FN-408 Single Base Substitution A-T INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.6:29771111 chr06:029771111 0 W/29771111-29771111 FN408-S Single Base Substitution A-T INTRON HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1392-S.SNP.6:29771975 chr06:029771975 0 W/29771975-29771975 FN1392-S Single Base Substitution T-C INTRON HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2309.SNP.6:29785457 chr06:029785457 0 W/29785457-29785457 FN2309 SNP C -> A AC=1;AN=192;BQB=0.548459;DP=4857;DP4=2190,2431,4,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205888;MQB=2.26667e-08;MQSB=0.531292;RPB=0.64251;SGB=50.4731;VDB=0.109184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.6:29788440 chr06:029788440 0 W/29788440-29788440 FN3846-S SNP C -> A AC=1;AN=190;BQB=0.952039;DP=2833;DP4=1469,1259,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.91278e-07;MQSB=0.961142;RPB=0.950402;SGB=53.6492;VDB=0.758614;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R338S|343|LOC_Os06g49150|protein_coding|CODING|LOC_Os06g49150.1|5|1) FN631-S.SNP.6:29791652 chr06:029791652 0 W/29791652-29791652 FN631-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2614-S.SNP.6:29791779 chr06:029791779 0 W/29791779-29791779 FN2614-S SNP T -> C AC=1;AN=198;BQB=0.947664;DP=3617;DP4=1643,1428,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.56318e-11;MQSB=0.946072;RPB=0.217079;SGB=42.3199;VDB=0.108403;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E536G|740|LOC_Os06g49170|protein_coding|CODING|LOC_Os06g49170.1|3|1) FN3779-S.SNP.6:29800774 chr06:029800774 0 W/29800774-29800774 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.0786728;DP=2809;DP4=1450,1189,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61638e-05;MQSB=0.977302;RPB=0.673233;SGB=8.77275;VDB=0.729744;EFF=INTRON(MODIFIER||||289|LOC_Os06g49180|protein_coding|CODING|LOC_Os06g49180.1|2|1) FN2339.SNP.6:29801763 chr06:029801763 0 W/29801763-29801763 FN2339 SNP A -> G AC=2;AN=192;BQB=0.712344;DP=5192;DP4=2525,2306,19,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.39208e-23;MQSB=0.967848;RPB=0.933295;SGB=116.102;VDB=0.758619;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.6:29803213 chr06:029803213 0 W/29803213-29803213 FN695-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os06g49185 expressed protein SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN_827-1.SNP.6:29805337 chr06:029805337 0 W/29805337-29805337 FN_827-1 Single Base Substitution G-T Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN_827-1.SNP.6:29805341 chr06:029805341 0 W/29805341-29805341 FN_827-1 Single Base Substitution C-T Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN-274.SNP.6:29806092 chr06:029806092 0 W/29806092-29806092 FN-274 Single Base Substitution G-A INTERGENIC HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4030-S.SNP.6:29807271 chr06:029807271 0 W/29807271-29807271 FN4030-S SNP T -> A AC=2;AN=168;BQB=0.931502;DP=2935;DP4=1637,1211,15,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.18441e-16;MQSB=0.998524;RPB=0.226848;SGB=106.795;VDB=0.247512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.6:29818073 chr06:029818073 0 W/29818073-29818073 FN2627-S SNP A -> C AC=2;AN=200;BQB=0.982566;DP=4832;DP4=2240,2329,16,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83331e-21;MQSB=0.805785;RPB=0.9982;SGB=89.4038;VDB=0.371419;EFF=INTRON(MODIFIER||||1371|LOC_Os06g49210|protein_coding|CODING|LOC_Os06g49210.1|9|1) FN_N1-213-1.SNP.6:29818343 chr06:029818343 0 W/29818343-29818343 FN_N1-213-1 Single Base Substitution A-T HET LOC_Os06g49210 retrotransposon protein, putative, unclassified, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1517-S.SNP.6:29830042 chr06:029830042 0 W/29830042-29830042 FN1517-S Single Base Substitution C-T INTRON HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN4072-S.SNP.6:29833609 chr06:029833609 0 W/29833609-29833609 FN4072-S SNP A -> G AC=1;AN=182;BQB=0.95205;DP=3155;DP4=1638,1282,16,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.16698e-10;MQSB=0.955236;RPB=0.93898;SGB=-13.3123;VDB=0.937467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.6:29838501 chr06:029838501 0 W/29838501-29838501 FN2470 SNP G -> A AC=2;AN=200;BQB=0.489013;DP=5063;DP4=2546,2252,22,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000197511;MQB=2.74678e-24;MQSB=0.993856;RPB=0.971945;SGB=183.209;VDB=0.50198;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||490|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.4|2|1),INTRON(MODIFIER||||490|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.4|1|1),INTRON(MODIFIER||||502|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.2|1|1),INTRON(MODIFIER||||547|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.1|1|1),INTRON(MODIFIER||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.3|1|1),INTRON(MODIFIER||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.5|1|1);LOF=(LOC_Os06g49250|LOC_Os06g49250|5|0.20) FN3481-S.SNP.6:29838946 chr06:029838946 0 W/29838946-29838946 FN3481-S SNP A -> G AC=1;AN=184;BQB=0.998383;DP=3043;DP4=1759,1180,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.40662e-12;MQSB=0.987524;RPB=0.391421;SGB=63.9222;VDB=0.72961;EFF=SPLICE_SITE_REGION(LOW||||547|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.1|2|1),SPLICE_SITE_REGION(LOW||||502|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.2|2|1),SPLICE_SITE_REGION(LOW||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.3|2|1),SPLICE_SITE_REGION(LOW||||490|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.4|2|1),SPLICE_SITE_REGION(LOW||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.5|2|1),INTRON(MODIFIER||||547|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.1|2|1),INTRON(MODIFIER||||502|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.2|2|1),INTRON(MODIFIER||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.3|2|1),INTRON(MODIFIER||||490|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.4|2|1),INTRON(MODIFIER||||421|LOC_Os06g49250|protein_coding|CODING|LOC_Os06g49250.5|2|1) FN830-S.SNP.6:29840689 chr06:029840689 0 W/29840689-29840689 FN830-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os06g49250 peptide transporter PTR2, putative, expressed SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN4221-S.SNP.6:29843929 chr06:029843929 0 W/29843929-29843929 FN4221-S SNP G -> A AC=2;AN=170;BQB=0.76037;DP=2568;DP4=1177,1311,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.96786e-12;MQSB=0.995889;RPB=0.768845;SGB=101.184;VDB=0.61478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.6:29844580 chr06:029844580 0 W/29844580-29844580 FN-238 Single Base Substitution G-A INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN992-S.SNP.6:29845308 chr06:029845308 0 W/29845308-29845308 FN992-S Single Base Substitution G-A INTERGENIC HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN992-S.SNP.6:29845309 chr06:029845309 0 W/29845309-29845309 FN992-S Single Base Substitution G-C INTERGENIC HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN3515-S.SNP.6:29845937 chr06:029845937 0 W/29845937-29845937 FN3515-S SNP G -> A AC=1;AN=188;BQB=0.936375;DP=2922;DP4=1303,1447,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00136893;MQB=0.00215748;MQSB=3.39359e-05;RPB=0.982958;SGB=30.8063;VDB=0.791433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.6:29848564 chr06:029848564 0 W/29848564-29848564 FN2122-S SNP G -> A AC=2;AN=168;BQB=0.732608;DP=2672;DP4=1366,1241,13,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.76921e-13;MQSB=0.968952;RPB=0.851405;SGB=-82.1908;VDB=0.278956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.6:29851165 chr06:029851165 0 W/29851165-29851165 FN3449-S SNP A -> T AC=2;AN=184;BQB=0.956661;DP=2687;DP4=1312,1270,20,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.66586e-20;MQSB=0.926142;RPB=0.978255;SGB=109.705;VDB=0.913048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S577T|762|LOC_Os06g49260|protein_coding|CODING|LOC_Os06g49260.1|4|1) FN260-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN282-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN282-S Single Base Substitution C-T INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3311-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN3311-S Single Base Substitution C-T INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3528-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN3528-S SNP C -> T AC=2;AN=188;BQB=0.619769;DP=3842;DP4=2007,1685,29,23;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0223842;MQB=0.0404969;MQSB=0.184326;RPB=0.159678;SGB=230.711;VDB=0.631496;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN4164-S SNP C -> T AC=2;AN=170;BQB=0.946008;DP=1710;DP4=821,809,10,8;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0374269;MQB=0.160858;MQSB=0.806038;RPB=0.296034;SGB=74.528;VDB=0.649793;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN511-S Single Base Substitution C-T INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN530-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN530-S Single Base Substitution C-T INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN752-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN752-S Single Base Substitution C-T INTERGENIC HOMO SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN829-S.SNP.6:29862591 chr06:029862591 0 W/29862591-29862591 FN829-S Single Base Substitution C-T INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN1175-S.SNP.6:29863262 chr06:029863262 0 W/29863262-29863262 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1284-S.SNP.6:29868086 chr06:029868086 0 W/29868086-29868086 FN1284-S Single Base Substitution C-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2649-S.SNP.6:29874744 chr06:029874744 0 W/29874744-29874744 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.82028;DP=5151;DP4=2217,2578,12,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22081e-18;MQSB=0.551885;RPB=0.977902;SGB=112.373;VDB=0.893133;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.6:29877413 chr06:029877413 0 W/29877413-29877413 FN499-S Single Base Substitution A-C INTRON HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2419.SNP.6:29880385 chr06:029880385 0 W/29880385-29880385 FN2419 SNP G -> T AC=1;AN=200;BQB=0.528222;DP=4738;DP4=2133,2289,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021106;MQB=1.77936e-07;MQSB=0.466685;RPB=0.942191;SGB=6.27959;VDB=0.492772;EFF=SPLICE_SITE_DONOR(HIGH||||483|LOC_Os06g49310|protein_coding|CODING|LOC_Os06g49310.1|7|1),SPLICE_SITE_DONOR(HIGH||||396|LOC_Os06g49310|protein_coding|CODING|LOC_Os06g49310.2|7|1),INTRON(MODIFIER||||483|LOC_Os06g49310|protein_coding|CODING|LOC_Os06g49310.1|7|1),INTRON(MODIFIER||||396|LOC_Os06g49310|protein_coding|CODING|LOC_Os06g49310.2|7|1);LOF=(LOC_Os06g49310|LOC_Os06g49310|2|1.00) FN-293.SNP.6:29880447 chr06:029880447 0 W/29880447-29880447 FN-293 Single Base Substitution A-T INTRON HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1334-S.SNP.6:29881940 chr06:029881940 0 W/29881940-29881940 FN1334-S Single Base Substitution T-G INTRON HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1448-S.SNP.6:29885685 chr06:029885685 0 W/29885685-29885685 FN1448-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN775-S.SNP.6:29889862 chr06:029889862 0 W/29889862-29889862 FN775-S Single Base Substitution T-C INTERGENIC HOMO SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN950-S.SNP.6:29890806 chr06:029890806 0 W/29890806-29890806 FN950-S Single Base Substitution C-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2631-S.SNP.6:29891942 chr06:029891942 0 W/29891942-29891942 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.742144;DP=4360;DP4=2119,1925,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000229358;MQB=8.96723e-08;MQSB=0.939501;RPB=0.69732;SGB=54.6902;VDB=0.566796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T291M|472|LOC_Os06g49340|protein_coding|CODING|LOC_Os06g49340.1|1|1) FN2500.SNP.6:29893504 chr06:029893504 0 W/29893504-29893504 FN2500 SNP T -> A AC=1;AN=200;BQB=0.795633;DP=4431;DP4=2083,2028,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53325e-14;MQSB=0.483575;RPB=0.894059;SGB=20.7261;VDB=0.10459;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.6:29893767 chr06:029893767 0 W/29893767-29893767 FN435-S Single Base Substitution G-T INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN3662-S.SNP.6:29911723 chr06:029911723 0 W/29911723-29911723 FN3662-S SNP G -> T AC=1;AN=190;BQB=0.996405;DP=3076;DP4=1521,1468,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.144018;MQB=0.994953;MQSB=4.79323e-08;RPB=0.485536;SGB=25.439;VDB=0.131182;EFF=INTRON(MODIFIER||||247|LOC_Os06g49370|protein_coding|CODING|LOC_Os06g49370.1|2|1) FN1097-S.SNP.6:29913239 chr06:029913239 0 W/29913239-29913239 FN1097-S Single Base Substitution C-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2094-S.SNP.6:29916007 chr06:029916007 0 W/29916007-29916007 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.77369;DP=2767;DP4=1623,1119,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0552945;MQB=0.870167;MQSB=0;RPB=0.524091;SGB=22.1847;VDB=0.134913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.6:29916881 chr06:029916881 0 W/29916881-29916881 FN2494 SNP C -> A AC=2;AN=200;BQB=0.998483;DP=5291;DP4=2740,2256,23,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000189;MQB=6.0861e-30;MQSB=0.853272;RPB=0.898752;SGB=59.2502;VDB=0.880847;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.6:29931495 chr06:029931495 0 W/29931495-29931495 FN-301 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1263-S.SNP.6:29942687 chr06:029942687 0 W/29942687-29942687 FN1263-S Single Base Substitution C-A INTRON HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN850-S.SNP.6:29946079 chr06:029946079 0 W/29946079-29946079 FN850-S Single Base Substitution G-A INTRON HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN947-S.SNP.6:29958464 chr06:029958464 0 W/29958464-29958464 FN947-S Single Base Substitution T-C INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN2441.SNP.6:29960994 chr06:029960994 0 W/29960994-29960994 FN2441 SNP A -> G AC=2;AN=200;BQB=0.99943;DP=4216;DP4=1886,1959,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.92035e-23;MQSB=0.995249;RPB=0.549584;SGB=102.43;VDB=0.271832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.6:29973101 chr06:029973101 0 W/29973101-29973101 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.984704;DP=4490;DP4=2155,2101,4,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.93183e-11;MQSB=0.625084;RPB=0.638186;SGB=34.5346;VDB=0.774605;EFF=UTR_3_PRIME(MODIFIER||128||208|LOC_Os06g49470|protein_coding|CODING|LOC_Os06g49470.1|7|1) FN2422.SNP.6:29979040 chr06:029979040 0 W/29979040-29979040 FN2422 SNP A -> T AC=2;AN=200;BQB=0.448158;DP=5089;DP4=2619,2160,23,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.19718e-29;MQSB=0.745451;RPB=0.903515;SGB=184.476;VDB=0.216238;EFF=UTR_3_PRIME(MODIFIER||741||413|LOC_Os06g49500|protein_coding|CODING|LOC_Os06g49500.3|7|1),UTR_3_PRIME(MODIFIER||741||413|LOC_Os06g49500|protein_coding|CODING|LOC_Os06g49500.1|7|1),UTR_3_PRIME(MODIFIER||741||413|LOC_Os06g49500|protein_coding|CODING|LOC_Os06g49500.2|6|1) FN2655-S.SNP.6:29983229 chr06:029983229 0 W/29983229-29983229 FN2655-S SNP A -> G AC=1;AN=200;BQB=0.945747;DP=4339;DP4=2154,1876,12,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.73043e-11;MQSB=6.06727e-13;RPB=0.453353;SGB=76.3213;VDB=0.977348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.6:29990143 chr06:029990143 0 W/29990143-29990143 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.955706;DP=4426;DP4=2247,1953,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.1033e-08;MQSB=0.995948;RPB=0.900515;SGB=58.7391;VDB=0.561073;EFF=UTR_3_PRIME(MODIFIER||174||469|LOC_Os06g49510|protein_coding|CODING|LOC_Os06g49510.1|6|1),UTR_3_PRIME(MODIFIER||174||350|LOC_Os06g49510|protein_coding|CODING|LOC_Os06g49510.2|3|1) FN627-S.SNP.6:29996856 chr06:029996856 0 W/29996856-29996856 FN627-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g49530 OsFBX206 - F-box domain containing protein, expressed SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2587-S.SNP.6:30008931 chr06:030008931 0 W/30008931-30008931 FN2587-S SNP C -> A AC=2;AN=198;BQB=0.841694;DP=4275;DP4=2017,1979,34,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.88683e-34;MQSB=0.872816;RPB=0.739604;SGB=191.144;VDB=0.0115064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q552H|741|LOC_Os06g49550|protein_coding|CODING|LOC_Os06g49550.1|1|1) FN2213-S.SNP.6:30018688 chr06:030018688 0 W/30018688-30018688 FN2213-S SNP C -> T AC=1;AN=190;BQB=0.0323318;DP=3064;DP4=1700,1064,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.291123;MQB=0.666469;MQSB=0;RPB=0.871642;SGB=76.4186;VDB=0.998407;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.6:30022972 chr06:030022972 0 W/30022972-30022972 FN421-S Single Base Substitution G-A INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2587-S.SNP.6:30025252 chr06:030025252 0 W/30025252-30025252 FN2587-S SNP C -> A AC=2;AN=198;BQB=0.999993;DP=4165;DP4=1995,1867,27,19;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00552221;MQB=2.79311e-18;MQSB=0.484659;RPB=0.7791;SGB=104.603;VDB=0.502329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.6:30025268 chr06:030025268 0 W/30025268-30025268 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.991992;DP=4242;DP4=1987,1771,30,22;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00589345;MQB=3.76588e-17;MQSB=0.449687;RPB=0.749645;SGB=-49.5966;VDB=0.989272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.6:30027087 chr06:030027087 0 W/30027087-30027087 FN2109-S SNP G -> T AC=2;AN=168;BQB=0.130035;DP=3135;DP4=1664,1407,22,18;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0133971;MQB=1.39792e-13;MQSB=5.06329e-34;RPB=0.685652;SGB=-139.169;VDB=0.438482;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.6:30027088 chr06:030027088 0 W/30027088-30027088 FN2109-S SNP G -> A AC=2;AN=168;BQB=0.00385795;DP=3140;DP4=1674,1399,19,22;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0124204;MQB=5.05774e-12;MQSB=1.72545e-34;RPB=0.305139;SGB=-187.163;VDB=0.545485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.6:30031776 chr06:030031776 0 W/30031776-30031776 FN2697-S SNP A -> G AC=2;AN=200;BQB=0.196648;DP=5184;DP4=2526,2354,27,44;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.561e-37;MQSB=0.755756;RPB=0.959636;SGB=-132.237;VDB=0.699841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.6:30044535 chr06:030044535 0 W/30044535-30044535 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.767663;DP=1654;DP4=720,797,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.73886e-05;MQSB=0.0363949;RPB=0.331948;SGB=35.4339;VDB=0.810426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.6:30044679 chr06:030044679 0 W/30044679-30044679 FN3753-S SNP G -> A AC=2;AN=190;BQB=0.257809;DP=1991;DP4=1103,753,14,5;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00050226;MQB=3.70562e-05;MQSB=0.153635;RPB=0.997652;SGB=57.4238;VDB=0.1931;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.6:30062107 chr06:030062107 0 W/30062107-30062107 FN2496 SNP C -> T AC=1;AN=200;BQB=0.967539;DP=5208;DP4=2569,2265,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000192012;MQB=8.58088e-13;MQSB=0.9994;RPB=0.241682;SGB=15.9106;VDB=0.759916;EFF=INTRON(MODIFIER||||492|LOC_Os06g49670|protein_coding|CODING|LOC_Os06g49670.1|3|1),INTRON(MODIFIER||||492|LOC_Os06g49670|protein_coding|CODING|LOC_Os06g49670.2|3|1) FN1750-S.SNP.6:30068602 chr06:030068602 0 W/30068602-30068602 FN1750-S SNP A -> T AC=1;AN=188;BQB=0.921488;DP=3814;DP4=1996,1796,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.64268e-05;MQSB=0.999056;RPB=0.719639;SGB=18.4463;VDB=0.579086;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.6:30070429 chr06:030070429 0 W/30070429-30070429 FN1446-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN360-S.SNP.6:30080483 chr06:030080483 0 W/30080483-30080483 FN360-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g49720 retrotransposon protein, putative, unclassified, expressed SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN536-S.SNP.6:30083379 chr06:030083379 0 W/30083379-30083379 FN536-S Single Base Substitution C-T INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN527-S.SNP.6:30084286 chr06:030084286 0 W/30084286-30084286 FN527-S Single Base Substitution T-C INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3966-S.SNP.6:30084963 chr06:030084963 0 W/30084963-30084963 FN3966-S SNP G -> A AC=2;AN=168;BQB=0.977111;DP=1802;DP4=843,881,8,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.60967e-08;MQSB=0.70904;RPB=0.66801;SGB=45.0404;VDB=0.52348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G46S|95|LOC_Os06g49730|protein_coding|CODING|LOC_Os06g49730.1|1|1) FN-283.SNP.6:30085261 chr06:030085261 0 W/30085261-30085261 FN-283 Single Base Substitution G-A INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2451.SNP.6:30087370 chr06:030087370 0 W/30087370-30087370 FN2451 SNP T -> C AC=2;AN=200;BQB=0.998727;DP=3782;DP4=1488,1736,23,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.40974e-16;MQSB=0.964321;RPB=0.619482;SGB=-44.3966;VDB=0.214914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V49A|340|LOC_Os06g49740|protein_coding|CODING|LOC_Os06g49740.1|1|1),UTR_5_PRIME(MODIFIER||165||268|LOC_Os06g49740|protein_coding|CODING|LOC_Os06g49740.2|1|1) FN3750-S.SNP.6:30087544 chr06:030087544 0 W/30087544-30087544 FN3750-S SNP A -> G AC=1;AN=190;BQB=0.919873;DP=2800;DP4=1328,1344,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06676e-13;MQSB=0.999576;RPB=0.970446;SGB=68.0854;VDB=0.368948;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N4D|268|LOC_Os06g49740|protein_coding|CODING|LOC_Os06g49740.2|1|1),INTRON(MODIFIER||||340|LOC_Os06g49740|protein_coding|CODING|LOC_Os06g49740.1|1|1) FN3286-S.SNP.6:30093188 chr06:030093188 0 W/30093188-30093188 FN3286-S SNP T -> C AC=1;AN=184;BQB=0.962332;DP=3917;DP4=2062,1648,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.94392e-11;MQSB=0.817043;RPB=0.651857;SGB=60.4004;VDB=0.0644696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aga/Gga|R98G|437|LOC_Os06g49750|protein_coding|CODING|LOC_Os06g49750.1|1|1) FN2224-S.SNP.6:30093543 chr06:030093543 0 W/30093543-30093543 FN2224-S SNP G -> C AC=1;AN=190;BQB=0.384035;DP=4053;DP4=2288,1498,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.16155e-08;MQSB=3.44024e-10;RPB=0.0720186;SGB=43.2083;VDB=0.193624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.6:30097281 chr06:030097281 0 W/30097281-30097281 FN2219-S SNP G -> T AC=1;AN=190;BQB=0.991742;DP=4612;DP4=2359,1862,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46079e-12;MQSB=0.989034;RPB=0.993813;SGB=75.1932;VDB=0.451972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.6:30098571 chr06:030098571 0 W/30098571-30098571 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.310992;DP=2856;DP4=1303,1429,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.6565e-07;MQSB=0.876385;RPB=0.571578;SGB=26.2136;VDB=0.10895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.6:30100159 chr06:030100159 0 W/30100159-30100159 FN2706-S SNP A -> T AC=1;AN=200;BQB=0.776091;DP=5296;DP4=2312,2695,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49795e-14;MQSB=0.0736473;RPB=0.919133;SGB=58.1418;VDB=0.291937;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.6:30100273 chr06:030100273 0 W/30100273-30100273 W500-4-7-1 Single Base Substitution G-A INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2086-S.SNP.6:30101760 chr06:030101760 0 W/30101760-30101760 FN2086-S SNP C -> A AC=1;AN=168;BQB=0.304948;DP=3931;DP4=2064,1809,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.61082e-05;MQSB=0.948583;RPB=0.73009;SGB=-37.2282;VDB=0.472408;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.6:30102058 chr06:030102058 0 W/30102058-30102058 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.984936;DP=5038;DP4=2448,2382,13,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.29114e-09;MQSB=0.999927;RPB=0.93124;SGB=29.4849;VDB=0.945205;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.6:30106703 chr06:030106703 0 W/30106703-30106703 FN833-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g49760 invertase/pectin methylesterase inhibitor family protein, putative, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN780-S.SNP.6:30125245 chr06:030125245 0 W/30125245-30125245 FN780-S Single Base Substitution T-G INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1585-S.SNP.6:30125972 chr06:030125972 0 W/30125972-30125972 FN1585-S Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1011-S.SNP.6:30143421 chr06:030143421 0 W/30143421-30143421 FN1011-S Single Base Substitution T-C INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN-312.SNP.6:30145038 chr06:030145038 0 W/30145038-30145038 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN3666-S.SNP.6:30150631 chr06:030150631 0 W/30150631-30150631 FN3666-S SNP T -> A AC=1;AN=190;BQB=0.960472;DP=2166;DP4=539,1546,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57387e-06;MQSB=7.71597e-11;RPB=0.542383;SGB=49.0954;VDB=0.334886;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.6:30158126 chr06:030158126 0 W/30158126-30158126 FN957-S Single Base Substitution T-C INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN871-S.SNP.6:30171705 chr06:030171705 0 W/30171705-30171705 FN871-S Single Base Substitution T-A INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2713-S.SNP.6:30176241 chr06:030176241 0 W/30176241-30176241 FN2713-S SNP C -> A AC=1;AN=200;BQB=0.999965;DP=1362;DP4=35,1218,0,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77126e-08;MQSB=0.993871;RPB=0.998536;SGB=19.0642;VDB=0.0107114;EFF=INTRON(MODIFIER||||224|LOC_Os06g49840|protein_coding|CODING|LOC_Os06g49840.1|5|1),INTRON(MODIFIER||||224|LOC_Os06g49840|protein_coding|CODING|LOC_Os06g49840.2|6|1) FN1380-S.SNP.6:30179291 chr06:030179291 0 W/30179291-30179291 FN1380-S Single Base Substitution T-C INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3607-S.SNP.6:30179384 chr06:030179384 0 W/30179384-30179384 FN3607-S SNP T -> A AC=1;AN=190;BQB=0.673127;DP=2501;DP4=1327,1049,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07683e-06;MQSB=0.954507;RPB=0.858114;SGB=23.6597;VDB=0.952493;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.6:30180619 chr06:030180619 0 W/30180619-30180619 FN-236 Single Base Substitution C-G INTRON HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1745-S.SNP.6:30182936 chr06:030182936 0 W/30182936-30182936 FN1745-S SNP T -> C AC=2;AN=188;BQB=0.058147;DP=3234;DP4=995,2183,12,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.57611e-16;MQSB=0.676859;RPB=0.923873;SGB=-285.559;VDB=0.774809;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.6:30184351 chr06:030184351 0 W/30184351-30184351 FN706-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g49860 methyltransferase, putative, expressed SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2150-S.SNP.6:30184602 chr06:030184602 0 W/30184602-30184602 FN2150-S SNP C -> G AC=1;AN=168;BQB=0.447975;DP=1698;DP4=801,831,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000840216;MQSB=0.930269;RPB=0.950778;SGB=25.5891;VDB=0.377633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C443W|933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|1|1) FN4108-S.SNP.6:30185542 chr06:030185542 0 W/30185542-30185542 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.874324;DP=2624;DP4=1327,1225,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.60111e-08;MQSB=0.981622;RPB=0.958327;SGB=15.6115;VDB=0.696154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A727V|933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|2|1) FN2682-S.SNP.6:30186036 chr06:030186036 0 W/30186036-30186036 FN2682-S SNP A -> C AC=1;AN=200;BQB=0.771347;DP=4513;DP4=2519,1815,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000182583;MQSB=0.830066;RPB=0.756917;SGB=25.849;VDB=0.09636;EFF=INTRON(MODIFIER||||933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|2|1) FN4108-S.SNP.6:30186048 chr06:030186048 0 W/30186048-30186048 FN4108-S SNP C -> G AC=1;AN=182;BQB=0.620818;DP=2747;DP4=1672,967,13,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.7402e-13;MQSB=0.984227;RPB=0.259881;SGB=89.2199;VDB=0.449992;EFF=INTRON(MODIFIER||||933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|2|1) FN4108-S.SNP.6:30186049 chr06:030186049 0 W/30186049-30186049 FN4108-S SNP C -> A AC=1;AN=182;BQB=0.956319;DP=2743;DP4=1654,965,14,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.83476e-14;MQSB=0.962716;RPB=0.108958;SGB=67.2255;VDB=0.518682;EFF=SPLICE_SITE_REGION(LOW||||933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|2|1),INTRON(MODIFIER||||933|LOC_Os06g49860|protein_coding|CODING|LOC_Os06g49860.1|2|1) FN2696-S.SNP.6:30198051 chr06:030198051 0 W/30198051-30198051 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.864917;DP=5143;DP4=2431,2527,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00718e-14;MQSB=0.413199;RPB=0.768986;SGB=19.1209;VDB=0.0410372;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.6:30210525 chr06:030210525 0 W/30210525-30210525 FN750-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os06g49900 retrotransposon protein, putative, unclassified, expressed SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN-252.SNP.6:30212479 chr06:030212479 0 W/30212479-30212479 FN-252 Single Base Substitution A-T INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-252.SNP.6:30212481 chr06:030212481 0 W/30212481-30212481 FN-252 Single Base Substitution T-C INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-161.SNP.6:30214619 chr06:030214619 0 W/30214619-30214619 FN-161 Single Base Substitution A-G INTRON HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2673-S.SNP.6:30235925 chr06:030235925 0 W/30235925-30235925 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.097436;DP=5135;DP4=2486,2435,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07883e-07;MQSB=0.792903;RPB=0.739056;SGB=-13.1102;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F66S|248|LOC_Os06g49940|protein_coding|CODING|LOC_Os06g49940.1|1|1) FN-217.SNP.6:30239465 chr06:030239465 0 W/30239465-30239465 FN-217 Single Base Substitution T-C INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1255-S.SNP.6:30245568 chr06:030245568 0 W/30245568-30245568 FN1255-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g49950 retrotransposon protein, putative, unclassified, expressed SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN930-S.SNP.6:30253004 chr06:030253004 0 W/30253004-30253004 FN930-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g49960 retrotransposon protein, putative, unclassified, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN-78.SNP.6:30266550 chr06:030266550 0 W/30266550-30266550 FN-78 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os06g49970 alpha-amylase precursor, putative, expressed SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN625-S.SNP.6:30270125 chr06:030270125 0 W/30270125-30270125 FN625-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1757-S.SNP.6:30275166 chr06:030275166 0 W/30275166-30275166 FN1757-S SNP A -> T AC=1;AN=188;BQB=0.208915;DP=3540;DP4=1828,1670,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.80383e-09;MQSB=0.889918;RPB=0.786397;SGB=36.2493;VDB=0.40232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N395K|426|LOC_Os06g49990|protein_coding|CODING|LOC_Os06g49990.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N395K|426|LOC_Os06g49990|protein_coding|CODING|LOC_Os06g49990.2|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N395K|426|LOC_Os06g49990|protein_coding|CODING|LOC_Os06g49990.3|13|1) W598-2-1.SNP.6:30293628 chr06:030293628 0 W/30293628-30293628 W598-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1334-S.SNP.6:30294196 chr06:030294196 0 W/30294196-30294196 FN1334-S Single Base Substitution T-C INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2449.SNP.6:30300044 chr06:030300044 0 W/30300044-30300044 FN2449 SNP A -> G AC=1;AN=200;BQB=0.217777;DP=5116;DP4=2435,2356,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.29352e-10;MQSB=0.889374;RPB=0.360191;SGB=100.316;VDB=0.740332;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.6:30304546 chr06:030304546 0 W/30304546-30304546 FN4279-S SNP G -> C AC=2;AN=170;BQB=0.984087;DP=2432;DP4=1072,1243,10,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.95525e-17;MQSB=0.906337;RPB=0.804854;SGB=127.84;VDB=0.322748;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G232A|623|LOC_Os06g50030|protein_coding|CODING|LOC_Os06g50030.1|2|1) FN4271-S.SNP.6:30304613 chr06:030304613 0 W/30304613-30304613 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.904219;DP=2299;DP4=984,1248,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02297e-06;MQSB=0.999994;RPB=0.754806;SGB=47.8722;VDB=0.176605;EFF=SPLICE_SITE_DONOR(HIGH||||623|LOC_Os06g50030|protein_coding|CODING|LOC_Os06g50030.1|2|1),INTRON(MODIFIER||||623|LOC_Os06g50030|protein_coding|CODING|LOC_Os06g50030.1|2|1);LOF=(LOC_Os06g50030|LOC_Os06g50030|1|1.00) FN580-S.SNP.6:30306920 chr06:030306920 0 W/30306920-30306920 FN580-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN389-S.SNP.6:30319125 chr06:030319125 0 W/30319125-30319125 FN389-S Single Base Substitution T-G INTERGENIC HOMO SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3913-S.SNP.6:30324369 chr06:030324369 0 W/30324369-30324369 FN3913-S SNP T -> C AC=1;AN=158;BQB=0.822164;DP=2424;DP4=1099,1252,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.14228e-08;MQSB=0.99221;RPB=0.986691;SGB=44.1818;VDB=0.90666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.6:30344903 chr06:030344903 0 W/30344903-30344903 FN3911-S SNP T -> C AC=1;AN=158;BQB=0.623835;DP=2243;DP4=1098,1092,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.50704e-07;MQSB=0.992664;RPB=0.908231;SGB=42.6978;VDB=0.932962;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.6:30344912 chr06:030344912 0 W/30344912-30344912 FN3911-S SNP T -> A AC=1;AN=158;BQB=0.914999;DP=2243;DP4=1094,1093,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.60471e-06;MQSB=0.982914;RPB=0.686675;SGB=42.6978;VDB=0.884455;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.6:30345118 chr06:030345118 0 W/30345118-30345118 FN550-S Single Base Substitution A-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN4311-S.SNP.6:30345320 chr06:030345320 0 W/30345320-30345320 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.127151;DP=2374;DP4=1197,1107,12,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.46159e-07;MQSB=0.864105;RPB=0.206534;SGB=78.9707;VDB=0.902127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.6:30350473 chr06:030350473 0 W/30350473-30350473 FN2485 SNP G -> A AC=1;AN=200;BQB=0.536059;DP=4876;DP4=2394,2210,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205086;MQB=1.57353e-10;MQSB=0.965454;RPB=0.762361;SGB=86.5007;VDB=0.898955;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.6:30352198 chr06:030352198 0 W/30352198-30352198 FN552-S Single Base Substitution C-T INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN1150-S.SNP.6:30369432 chr06:030369432 0 W/30369432-30369432 FN1150-S Single Base Substitution G-T INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1512-S.SNP.6:30380626 chr06:030380626 0 W/30380626-30380626 FN1512-S Single Base Substitution T-A INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN_N1-119-1.SNP.6:30382975 chr06:030382975 0 W/30382975-30382975 FN_N1-119-1 Single Base Substitution G-A HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2140-S.SNP.6:30385016 chr06:030385016 0 W/30385016-30385016 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.189762;DP=3924;DP4=1887,1979,11,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.16158e-16;MQSB=0.923945;RPB=0.0147053;SGB=-116.046;VDB=0.305701;EFF=SPLICE_SITE_REGION(LOW||||344|LOC_Os06g50180|protein_coding|CODING|LOC_Os06g50180.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V188|344|LOC_Os06g50180|protein_coding|CODING|LOC_Os06g50180.1|6|1) FN2790-S.SNP.6:30388203 chr06:030388203 0 W/30388203-30388203 FN2790-S SNP C -> T AC=2;AN=198;BQB=0.993967;DP=3717;DP4=1689,1814,16,20;HOB=0.019998;ICB=0.495001;MQ=30;MQ0F=0.255582;MQB=0.996745;MQSB=0;RPB=0.455552;SGB=159.832;VDB=0.521394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T96M|1975|LOC_Os06g50190|protein_coding|CODING|LOC_Os06g50190.1|1|1) FN3316-S.SNP.6:30395779 chr06:030395779 0 W/30395779-30395779 FN3316-S SNP C -> A AC=1;AN=184;BQB=0.118899;DP=3185;DP4=1443,1466,4,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.4734e-07;MQSB=0.844499;RPB=0.907532;SGB=-131.252;VDB=0.659235;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.6:30403502 chr06:030403502 0 W/30403502-30403502 FN903-S Single Base Substitution C-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN2288.SNP.6:30403581 chr06:030403581 0 W/30403581-30403581 FN2288 SNP A -> T AC=1;AN=192;BQB=0.181352;DP=4827;DP4=2247,2224,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207168;MQB=3.97275e-10;MQSB=0.989475;RPB=0.955882;SGB=36.607;VDB=0.670682;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.6:30406319 chr06:030406319 0 W/30406319-30406319 FN4104-S SNP T -> A AC=1;AN=182;BQB=0.982035;DP=2753;DP4=1284,1352,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.38874e-05;MQSB=0.878387;RPB=0.341658;SGB=21.5845;VDB=0.490054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.6:30408335 chr06:030408335 0 W/30408335-30408335 FN1762-S SNP T -> A AC=1;AN=188;BQB=0.0515911;DP=3764;DP4=1290,2424,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0005722;MQSB=0.888295;RPB=0.443598;SGB=-81.5271;VDB=0.303136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.6:30412553 chr06:030412553 0 W/30412553-30412553 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.0586694;DP=4440;DP4=2071,2307,24,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.62458e-13;MQSB=0.9775;RPB=0.996049;SGB=-266.874;VDB=0.435061;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A330|597|LOC_Os06g50220|protein_coding|CODING|LOC_Os06g50220.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A327|594|LOC_Os06g50220|protein_coding|CODING|LOC_Os06g50220.2|8|1) FN4325-S.SNP.6:30414172 chr06:030414172 0 W/30414172-30414172 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.904812;DP=2609;DP4=1199,1338,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.5542e-07;MQSB=0.95782;RPB=0.454761;SGB=43.4296;VDB=0.233701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A545T|597|LOC_Os06g50220|protein_coding|CODING|LOC_Os06g50220.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A542T|594|LOC_Os06g50220|protein_coding|CODING|LOC_Os06g50220.2|12|1) FN3993-S.SNP.6:30421123 chr06:030421123 0 W/30421123-30421123 FN3993-S SNP A -> T AC=1;AN=168;BQB=0.94481;DP=2565;DP4=1458,880,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.18868e-05;MQSB=0.975871;RPB=0.982661;SGB=47.7421;VDB=0.821467;EFF=INTRON(MODIFIER||||318|LOC_Os06g50240|protein_coding|CODING|LOC_Os06g50240.1|2|1) FN2441.SNP.6:30421312 chr06:030421312 0 W/30421312-30421312 FN2441 SNP G -> A AC=1;AN=200;BQB=0.97511;DP=4434;DP4=2208,1966,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14861e-12;MQSB=0.987737;RPB=0.217284;SGB=39.9056;VDB=0.267191;EFF=INTRON(MODIFIER||||318|LOC_Os06g50240|protein_coding|CODING|LOC_Os06g50240.1|2|1) FN4137-S.SNP.6:30424666 chr06:030424666 0 W/30424666-30424666 FN4137-S SNP G -> A AC=1;AN=170;BQB=0.653932;DP=2853;DP4=1509,1260,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=23;MQ0F=0.202594;MQB=0.541187;MQSB=2.75635e-12;RPB=0.557121;SGB=-16.1043;VDB=0.885889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.6:30431013 chr06:030431013 0 W/30431013-30431013 FN2332 SNP C -> T AC=1;AN=192;BQB=0.0642935;DP=6977;DP4=4248,2346,25,8;HOB=5.42535e-05;ICB=0.000109072;MQ=27;MQ0F=0.157804;MQB=0.0325112;MQSB=0;RPB=0.914681;SGB=-5.17475;VDB=0.631578;EFF=INTRON(MODIFIER||||1969|LOC_Os06g50270|protein_coding|CODING|LOC_Os06g50270.1|2|1) FN2378.SNP.6:30435344 chr06:030435344 0 W/30435344-30435344 FN2378 SNP G -> C AC=1;AN=192;BQB=0.929833;DP=4723;DP4=2167,2336,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03588e-10;MQSB=0.935955;RPB=0.834309;SGB=72.0322;VDB=0.454874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T475S|636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|4|1) FN786-S.SNP.6:30435943 chr06:030435943 0 W/30435943-30435943 FN786-S Single Base Substitution C-T INTRON HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN-131.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN-131 Single Base Substitution G-A INTRON HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-182.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN-182 Single Base Substitution G-A INTRON HOMO SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-205.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN-205 Single Base Substitution G-A INTRON HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-72.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN-72 Single Base Substitution G-A INTRON HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1035-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN1035-S Single Base Substitution G-A INTRON HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1272-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN1272-S Single Base Substitution G-A INTRON HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1462-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN1462-S Single Base Substitution G-A INTRON Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1645-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN1645-S Single Base Substitution G-A INTRON Homo SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1718-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN1718-S SNP G -> A AC=2;AN=188;BQB=0.976055;DP=2415;DP4=856,1499,6,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3498e-13;MQSB=0.999366;RPB=0.982324;SGB=48.9658;VDB=0.451052;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN2167-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN2167-S SNP G -> A AC=2;AN=168;BQB=0.999728;DP=2788;DP4=1098,1617,15,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.55134e-18;MQSB=0.997752;RPB=0.360858;SGB=63.5086;VDB=0.580536;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN2207-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.996958;DP=4670;DP4=2238,2050,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.90256e-17;MQSB=0.970661;RPB=0.88471;SGB=100.07;VDB=0.804152;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN3527-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN3527-S SNP G -> A AC=2;AN=188;BQB=0.926283;DP=2974;DP4=1578,1318,7,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.29882e-10;MQSB=0.900156;RPB=0.787578;SGB=57.244;VDB=0.820671;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN3607-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN3607-S SNP G -> A AC=2;AN=190;BQB=0.998827;DP=2767;DP4=1315,1322,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.21231e-15;MQSB=0.99734;RPB=0.0644115;SGB=82.301;VDB=0.401123;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN3889-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN3889-S SNP G -> A AC=2;AN=158;BQB=0.999942;DP=2593;DP4=1285,1174,20,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.53838e-13;MQSB=0.949914;RPB=0.970696;SGB=54.6215;VDB=0.449691;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN4074-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN4074-S SNP G -> A AC=2;AN=182;BQB=0.779446;DP=3103;DP4=1563,1437,15,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.10687e-16;MQSB=0.876564;RPB=0.2627;SGB=98.8232;VDB=0.524292;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN4344-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.704161;DP=2509;DP4=1243,1191,11,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.98217e-08;MQSB=0.956361;RPB=0.439104;SGB=74.528;VDB=0.795822;EFF=INTRON(MODIFIER||||636|LOC_Os06g50280|protein_coding|CODING|LOC_Os06g50280.1|2|1) FN441-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN441-S Single Base Substitution G-A INTRON HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN512-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN512-S Single Base Substitution G-A INTRON HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN669-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN669-S Single Base Substitution G-A INTRON HOMO SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN791-S.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 FN791-S Single Base Substitution G-A INTRON HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. W470-2-1.SNP.6:30436203 chr06:030436203 0 W/30436203-30436203 W470-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2483.SNP.6:30438926 chr06:030438926 0 W/30438926-30438926 FN2483 SNP G -> A AC=1;AN=200;BQB=0.646285;DP=5192;DP4=2419,2486,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48449e-11;MQSB=0.486632;RPB=0.989537;SGB=42.5108;VDB=0.611746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.6:30444801 chr06:030444801 0 W/30444801-30444801 FN2478 SNP C -> T AC=1;AN=200;BQB=0.651593;DP=3845;DP4=1835,1751,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.55353e-08;MQSB=0.96204;RPB=0.927861;SGB=40.2696;VDB=0.185218;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A777|812|LOC_Os06g50300|protein_coding|CODING|LOC_Os06g50300.1|15|1) FN2556-S.SNP.6:30472256 chr06:030472256 0 W/30472256-30472256 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.481057;DP=3505;DP4=1577,1670,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.1204e-08;MQSB=0.623014;RPB=0.888592;SGB=77.1196;VDB=0.190271;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G735E|994|LOC_Os06g50340|protein_coding|CODING|LOC_Os06g50340.1|1|1) FN3892-S.SNP.6:30476849 chr06:030476849 0 W/30476849-30476849 FN3892-S SNP G -> C AC=2;AN=158;BQB=0.661684;DP=2488;DP4=1147,1203,7,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.97842e-07;MQSB=0.436782;RPB=0.988813;SGB=23.8187;VDB=0.38248;EFF=INTERGENIC(MODIFIER||||||||||1) FN761-S.SNP.6:30492198 chr06:030492198 0 W/30492198-30492198 FN761-S Single Base Substitution T-C INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3793-S.SNP.6:30495921 chr06:030495921 0 W/30495921-30495921 FN3793-S SNP A -> C AC=2;AN=190;BQB=0.916158;DP=2322;DP4=941,1281,8,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.57225e-15;MQSB=0.685507;RPB=0.505885;SGB=108.296;VDB=0.00138835;EFF=UTR_3_PRIME(MODIFIER||152||232|LOC_Os06g50370|protein_coding|CODING|LOC_Os06g50370.1|5|1) FN941-S.SNP.6:30497465 chr06:030497465 0 W/30497465-30497465 FN941-S Single Base Substitution T-A INTRON HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3480-S.SNP.6:30510439 chr06:030510439 0 W/30510439-30510439 FN3480-S SNP G -> C AC=2;AN=184;BQB=0.804733;DP=3324;DP4=1432,1755,17,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31761e-24;MQSB=0.730233;RPB=0.754159;SGB=175.352;VDB=0.268371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G296A|551|LOC_Os06g50390|protein_coding|CODING|LOC_Os06g50390.1|2|1) FN2739-S.SNP.6:30515041 chr06:030515041 0 W/30515041-30515041 FN2739-S SNP G -> T AC=1;AN=200;BQB=0.950584;DP=4952;DP4=2281,2412,10,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0218094;MQB=1.40477e-06;MQSB=0.653419;RPB=0.997124;SGB=109.527;VDB=0.116681;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.6:30516435 chr06:030516435 0 W/30516435-30516435 FN1263-S Single Base Substitution T-A INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2472.SNP.6:30517507 chr06:030517507 0 W/30517507-30517507 FN2472 SNP C -> T AC=1;AN=200;BQB=0.999493;DP=5166;DP4=2318,2526,22,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51342e-18;MQSB=0.684917;RPB=0.158632;SGB=123.188;VDB=0.166552;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.6:30530507 chr06:030530507 0 W/30530507-30530507 FN1327-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN4090-S.SNP.6:30538151 chr06:030538151 0 W/30538151-30538151 FN4090-S SNP T -> A AC=2;AN=182;BQB=0.982879;DP=2799;DP4=1279,1429,9,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.73222e-13;MQSB=0.977841;RPB=0.363423;SGB=102.753;VDB=0.524245;EFF=INTRON(MODIFIER||||116|LOC_Os06g50440|protein_coding|CODING|LOC_Os06g50440.1|1|1) FN868-S.SNP.6:30546295 chr06:030546295 0 W/30546295-30546295 FN868-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3353-S.SNP.6:30557225 chr06:030557225 0 W/30557225-30557225 FN3353-S SNP A -> G AC=1;AN=184;BQB=0.967876;DP=2919;DP4=1168,1450,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.38315e-05;MQSB=0.487129;RPB=0.954986;SGB=-2.32838;VDB=0.041198;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.6:30582379 chr06:030582379 0 W/30582379-30582379 FN-274 Single Base Substitution T-G INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN2345.SNP.6:30584566 chr06:030584566 0 W/30584566-30584566 FN2345 SNP A -> T AC=1;AN=192;BQB=0.997885;DP=5143;DP4=2580,2293,15,28;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000388878;MQB=4.31487e-24;MQSB=0.679019;RPB=0.929774;SGB=48.0279;VDB=0.75695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.6:30588023 chr06:030588023 0 W/30588023-30588023 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.0584292;DP=3747;DP4=1997,1707,10,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23595e-07;MQSB=0.945427;RPB=0.748294;SGB=-171.17;VDB=0.980227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.6:30624971 chr06:030624971 0 W/30624971-30624971 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.801427;DP=5022;DP4=2622,2122,17,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00677021;MQB=2.13377e-10;MQSB=0.623397;RPB=0.869591;SGB=83.5316;VDB=0.634211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.6:30633961 chr06:030633961 0 W/30633961-30633961 FN2322 SNP C -> T AC=1;AN=192;BQB=0.443362;DP=5862;DP4=2293,2819,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0571477;MQB=0.0293745;MQSB=0;RPB=0.435159;SGB=15.1765;VDB=0.293352;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G53|148|LOC_Os06g50610|protein_coding|CODING|LOC_Os06g50610.1|1|1) FN_552-1-1.SNP.6:30633961 chr06:030633961 0 W/30633961-30633961 FN_552-1-1 Single Base Substitution C-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3951-S.SNP.6:30635189 chr06:030635189 0 W/30635189-30635189 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.999977;DP=3084;DP4=1434,1531,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.059987;MQB=0.657845;MQSB=0.000473626;RPB=0.78068;SGB=61.0344;VDB=0.219508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:30713687 chr06:030713687 0 W/30713687-30713687 FN2657-S SNP G -> T AC=1;AN=200;BQB=0.125778;DP=6239;DP4=2270,3679,24,41;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0734092;MQB=1.93907e-11;MQSB=5.28735e-39;RPB=0.0234939;SGB=224.133;VDB=0.46481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:30713688 chr06:030713688 0 W/30713688-30713688 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.742572;DP=6204;DP4=2280,3532,23,44;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.072695;MQB=2.39811e-10;MQSB=1.01692e-41;RPB=0.0150849;SGB=159.743;VDB=0.549597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.6:30713689 chr06:030713689 0 W/30713689-30713689 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.297502;DP=6204;DP4=2272,3571,23,42;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0725338;MQB=8.1704e-12;MQSB=5.6004e-40;RPB=0.0356862;SGB=224.133;VDB=0.490303;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.6:30719088 chr06:030719088 0 W/30719088-30719088 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.993493;DP=4631;DP4=1866,2645,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=23;MQ0F=0.23537;MQB=0.885557;MQSB=0;RPB=0.325478;SGB=82.0471;VDB=0.0620495;EFF=INTRON(MODIFIER||||249|LOC_Os06g50770|protein_coding|CODING|LOC_Os06g50770.1|1|1) FN811-S.SNP.6:30719088 chr06:030719088 0 W/30719088-30719088 FN811-S Single Base Substitution G-A INTRON HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2678-S.SNP.6:30720070 chr06:030720070 0 W/30720070-30720070 FN2678-S SNP C -> T AC=2;AN=200;BQB=0.997049;DP=4487;DP4=2111,2097,16,25;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.021618;MQB=0.971582;MQSB=0.000204202;RPB=0.517339;SGB=137.609;VDB=0.942373;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.6:30744284 chr06:030744284 0 W/30744284-30744284 FN514-S Single Base Substitution A-G INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3665-S.SNP.6:30751176 chr06:030751176 0 W/30751176-30751176 FN3665-S SNP T -> A AC=1;AN=190;BQB=0.458034;DP=1904;DP4=1257,527,16,4;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.105567;MQB=0.00559751;MQSB=0.00332326;RPB=0.636914;SGB=36.4291;VDB=0.229976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.6:30763282 chr06:030763282 0 W/30763282-30763282 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.685515;DP=4007;DP4=1763,2061,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.24293e-17;MQSB=0.952393;RPB=0.542446;SGB=63.0809;VDB=0.653755;EFF=INTRON(MODIFIER||||488|LOC_Os06g50840|protein_coding|CODING|LOC_Os06g50840.1|1|1) FN2592-S.SNP.6:30766202 chr06:030766202 0 W/30766202-30766202 FN2592-S SNP C -> T AC=1;AN=198;BQB=0.614118;DP=4454;DP4=1898,2320,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.39042e-11;MQSB=0.849565;RPB=0.576599;SGB=20.5152;VDB=0.787256;EFF=INTRON(MODIFIER||||488|LOC_Os06g50840|protein_coding|CODING|LOC_Os06g50840.1|4|1) FN4180-S.SNP.6:30766721 chr06:030766721 0 W/30766721-30766721 FN4180-S SNP G -> A AC=1;AN=170;BQB=0.850736;DP=2552;DP4=1194,1306,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.41772e-05;MQSB=0.939866;RPB=0.451965;SGB=24.5502;VDB=0.549935;EFF=INTRON(MODIFIER||||488|LOC_Os06g50840|protein_coding|CODING|LOC_Os06g50840.1|6|1) FN1190-S.SNP.6:30770403 chr06:030770403 0 W/30770403-30770403 FN1190-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g50850 expressed protein SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN4304-S.SNP.6:30770403 chr06:030770403 0 W/30770403-30770403 FN4304-S SNP G -> A AC=1;AN=170;BQB=0.896686;DP=2748;DP4=1153,1505,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.39796e-07;MQSB=0.960865;RPB=0.447;SGB=61.2001;VDB=0.801753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D414N|430|LOC_Os06g50850|protein_coding|CODING|LOC_Os06g50850.1|4|1) FN-390.SNP.6:30786588 chr06:030786588 0 W/30786588-30786588 FN-390 Single Base Substitution A-C INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN494-S.SNP.6:30786817 chr06:030786817 0 W/30786817-30786817 FN494-S Single Base Substitution A-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN969-S.SNP.6:30792012 chr06:030792012 0 W/30792012-30792012 FN969-S Single Base Substitution C-A INTERGENIC HOMO SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN1330-S.SNP.6:30792285 chr06:030792285 0 W/30792285-30792285 FN1330-S Single Base Substitution A-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN566-S.SNP.6:30812054 chr06:030812054 0 W/30812054-30812054 FN566-S Single Base Substitution C-T INTRON HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1392-S.SNP.6:30814290 chr06:030814290 0 W/30814290-30814290 FN1392-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os06g50910 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2279-S.SNP.6:30822879 chr06:030822879 0 W/30822879-30822879 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.997953;DP=5068;DP4=2411,2307,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34181e-08;MQSB=0.88719;RPB=0.431623;SGB=38.983;VDB=0.575295;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A510|564|LOC_Os06g50920|protein_coding|CODING|LOC_Os06g50920.1|15|1) FN882-S.SNP.6:30824873 chr06:030824873 0 W/30824873-30824873 FN882-S Single Base Substitution C-T INTRON HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2691-S.SNP.6:30828837 chr06:030828837 0 W/30828837-30828837 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.763516;DP=4695;DP4=2318,2041,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.92775e-11;MQSB=0.867513;RPB=0.967802;SGB=34.6953;VDB=0.797067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G284W|381|LOC_Os06g50940|protein_coding|CODING|LOC_Os06g50940.1|4|1) FN260-S.SNP.6:30835477 chr06:030835477 0 W/30835477-30835477 FN260-S Single Base Substitution G-A INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN1297-S.SNP.6:30837448 chr06:030837448 0 W/30837448-30837448 FN1297-S Single Base Substitution T-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2678-S.SNP.6:30840121 chr06:030840121 0 W/30840121-30840121 FN2678-S SNP T -> A AC=1;AN=200;BQB=0.934658;DP=5058;DP4=2622,2241,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08249e-16;MQSB=0.925005;RPB=0.724033;SGB=25.5416;VDB=0.342787;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.6:30841376 chr06:030841376 0 W/30841376-30841376 FN4093-S SNP G -> T AC=1;AN=180;BQB=0.985936;DP=2821;DP4=1378,1368,4,3;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=4.55964e-05;MQSB=0.807836;RPB=0.975222;SGB=26.0691;VDB=0.794208;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.6:30851061 chr06:030851061 0 W/30851061-30851061 FN956-S Single Base Substitution A-T INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN503-S.SNP.6:30851725 chr06:030851725 0 W/30851725-30851725 FN503-S Single Base Substitution G-A INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN3366-S.SNP.6:30860614 chr06:030860614 0 W/30860614-30860614 FN3366-S SNP T -> G AC=1;AN=184;BQB=0.573931;DP=3096;DP4=1496,1493,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.49909e-07;MQSB=0.98816;RPB=0.985333;SGB=23.2751;VDB=0.220923;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.6:30871602 chr06:030871602 0 W/30871602-30871602 FN584-S Single Base Substitution G-A INTRON HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. W138-2-1.SNP.6:30871799 chr06:030871799 0 W/30871799-30871799 W138-2-1 Single Base Substitution C-T INTRON HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1555-S.SNP.6:30874087 chr06:030874087 0 W/30874087-30874087 FN1555-S Single Base Substitution A-T INTRON HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1109-S.SNP.6:30880555 chr06:030880555 0 W/30880555-30880555 FN1109-S Single Base Substitution A-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3811-S.SNP.6:30882500 chr06:030882500 0 W/30882500-30882500 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.921675;DP=2962;DP4=1347,1535,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00033761;MQB=0.13294;MQSB=0.00790443;RPB=0.988169;SGB=43.2083;VDB=0.228077;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.6:30887872 chr06:030887872 0 W/30887872-30887872 FN695-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g51050 CHIT7 - Chitinase family protein precursor, expressed SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3799-S.SNP.6:30888309 chr06:030888309 0 W/30888309-30888309 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.986839;DP=3004;DP4=1326,1568,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07995e-07;MQSB=0.861163;RPB=0.927377;SGB=53.6492;VDB=0.771836;EFF=UTR_3_PRIME(MODIFIER||55||320|LOC_Os06g51050|protein_coding|CODING|LOC_Os06g51050.1|1|1) FN-144.SNP.6:30889907 chr06:030889907 0 W/30889907-30889907 FN-144 Single Base Substitution T-A INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN779-S.SNP.6:30894061 chr06:030894061 0 W/30894061-30894061 FN779-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os06g51070 no apical meristem protein, putative, expressed SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1075-S.SNP.6:30894083 chr06:030894083 0 W/30894083-30894083 FN1075-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1492-S.SNP.6:30901863 chr06:030901863 0 W/30901863-30901863 FN1492-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os06g51084 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN-310.SNP.6:30905138 chr06:030905138 0 W/30905138-30905138 FN-310 Single Base Substitution C-T INTRON HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1392-S.SNP.6:30907354 chr06:030907354 0 W/30907354-30907354 FN1392-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN4039-S.SNP.6:30908786 chr06:030908786 0 W/30908786-30908786 FN4039-S SNP G -> T AC=1;AN=168;BQB=0.962005;DP=2481;DP4=1299,1076,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.77035e-06;MQSB=0.986145;RPB=0.956735;SGB=43.3113;VDB=0.931386;EFF=INTRON(MODIFIER||||479|LOC_Os06g51100|protein_coding|CODING|LOC_Os06g51100.1|7|1),INTRON(MODIFIER||||479|LOC_Os06g51100|protein_coding|CODING|LOC_Os06g51100.2|7|1) FN3513-S.SNP.6:30927971 chr06:030927971 0 W/30927971-30927971 FN3513-S SNP T -> A AC=2;AN=188;BQB=0.963412;DP=2425;DP4=1312,1034,2,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.000176828;MQSB=0.999508;RPB=0.578162;SGB=30.8063;VDB=0.666245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.6:30931982 chr06:030931982 0 W/30931982-30931982 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.723054;DP=2493;DP4=1330,1086,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67293e-07;MQSB=0.922131;RPB=0.759544;SGB=62.3078;VDB=0.961224;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.6:30936074 chr06:030936074 0 W/30936074-30936074 FN867-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os06g51140 ZOS6-11 - C2H2 zinc finger protein, expressed SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN1273-S.SNP.6:30937224 chr06:030937224 0 W/30937224-30937224 FN1273-S Single Base Substitution T-C INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN3749-S.SNP.6:30937937 chr06:030937937 0 W/30937937-30937937 FN3749-S SNP C -> A AC=1;AN=190;BQB=0.916188;DP=2479;DP4=1091,1302,1,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000807856;MQSB=0.999754;RPB=0.705398;SGB=26.3271;VDB=0.51669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.6:30941899 chr06:030941899 0 W/30941899-30941899 FN3419-S SNP C -> T AC=2;AN=184;BQB=0.976185;DP=2308;DP4=993,1236,11,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.00417e-16;MQSB=0.998301;RPB=0.987921;SGB=107.526;VDB=0.379177;EFF=INTERGENIC(MODIFIER||||||||||1) FN697-S.SNP.6:30942451 chr06:030942451 0 W/30942451-30942451 FN697-S Single Base Substitution G-T INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN2440.SNP.6:30943596 chr06:030943596 0 W/30943596-30943596 FN2440 SNP T -> A AC=1;AN=200;BQB=0.321896;DP=4842;DP4=2052,2506,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13808e-11;MQSB=0.993955;RPB=0.934184;SGB=34.6953;VDB=0.0908513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.6:30943597 chr06:030943597 0 W/30943597-30943597 FN2242-S SNP A -> T AC=1;AN=190;BQB=0.924018;DP=4830;DP4=2056,2495,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57443e-09;MQSB=0.9911;RPB=0.319977;SGB=-13.7759;VDB=0.194183;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.6:30943597 chr06:030943597 0 W/30943597-30943597 FN2434 SNP A -> T AC=1;AN=200;BQB=0.159874;DP=4835;DP4=2054,2536,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86472e-05;MQSB=0.985346;RPB=0.872785;SGB=-15.5309;VDB=0.754356;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.6:30960943 chr06:030960943 0 W/30960943-30960943 FN337-S Single Base Substitution C-A INTRON HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN793-S.SNP.6:30963440 chr06:030963440 0 W/30963440-30963440 FN793-S Single Base Substitution A-T INTRON HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1230-S.SNP.6:30965611 chr06:030965611 0 W/30965611-30965611 FN1230-S Single Base Substitution T-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN726-S.SNP.6:30965611 chr06:030965611 0 W/30965611-30965611 FN726-S Single Base Substitution T-A INTERGENIC HOMO SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN4094-S.SNP.6:30967258 chr06:030967258 0 W/30967258-30967258 FN4094-S SNP T -> A AC=2;AN=182;BQB=0.903151;DP=2325;DP4=635,1625,4,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.99533e-13;MQSB=0.902465;RPB=0.998484;SGB=63.7146;VDB=0.0156023;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.6:30968885 chr06:030968885 0 W/30968885-30968885 FN-164 Single Base Substitution T-C INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1075-S.SNP.6:30969048 chr06:030969048 0 W/30969048-30969048 FN1075-S Single Base Substitution C-T INTRON HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN781-S.SNP.6:30972547 chr06:030972547 0 W/30972547-30972547 FN781-S Single Base Substitution T-C INTRON HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN-184.SNP.6:30983670 chr06:030983670 0 W/30983670-30983670 FN-184 Single Base Substitution C-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3445-S.SNP.6:30985252 chr06:030985252 0 W/30985252-30985252 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.98991;DP=3384;DP4=1604,1657,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000591017;MQB=1.51869e-06;MQSB=0.266841;RPB=0.967091;SGB=23.2751;VDB=0.248028;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.6:30991272 chr06:030991272 0 W/30991272-30991272 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN848-S.SNP.6:30991273 chr06:030991273 0 W/30991273-30991273 FN848-S Single Base Substitution T-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN704-S.SNP.6:30996592 chr06:030996592 0 W/30996592-30996592 FN704-S Single Base Substitution A-G INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN428-S.SNP.6:30997112 chr06:030997112 0 W/30997112-30997112 FN428-S Single Base Substitution A-G INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2617-S.SNP.6:31005202 chr06:031005202 0 W/31005202-31005202 FN2617-S SNP C -> G AC=1;AN=198;BQB=0.892299;DP=3941;DP4=2165,1525,19,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.51887e-13;MQSB=0.584121;RPB=0.636461;SGB=132.261;VDB=0.0793438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.6:31006966 chr06:031006966 0 W/31006966-31006966 FN2591-S SNP T -> C AC=1;AN=198;BQB=0.991415;DP=3774;DP4=1854,1690,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.19566e-06;MQSB=0.997677;RPB=0.870148;SGB=25.7687;VDB=0.761058;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.6:31021301 chr06:031021301 0 W/31021301-31021301 FN460-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os06g51250 EF hand family protein, putative, expressed SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2195-S.SNP.6:31022072 chr06:031022072 0 W/31022072-31022072 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.999792;DP=5023;DP4=2618,2134,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16224e-14;MQSB=0.935782;RPB=0.480189;SGB=112.85;VDB=0.485821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.6:31023554 chr06:031023554 0 W/31023554-31023554 FN-223 Single Base Substitution G-A INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3756-S.SNP.6:31024915 chr06:031024915 0 W/31024915-31024915 FN3756-S SNP T -> C AC=1;AN=190;BQB=0.409727;DP=2243;DP4=1066,1107,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.80028e-06;MQSB=0.997152;RPB=0.712915;SGB=49.0954;VDB=0.155627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.6:31028705 chr06:031028705 0 W/31028705-31028705 FN2432 SNP G -> A AC=2;AN=200;BQB=0.872671;DP=4368;DP4=2128,1856,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.40631e-19;MQSB=0.405028;RPB=0.637177;SGB=39.9882;VDB=0.13181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S3F|451|LOC_Os06g51260|protein_coding|CODING|LOC_Os06g51260.1|1|1) FN700-S.SNP.6:31032755 chr06:031032755 0 W/31032755-31032755 FN700-S Single Base Substitution A-T INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1012-S.SNP.6:31037671 chr06:031037671 0 W/31037671-31037671 FN1012-S Single Base Substitution A-G INTRON HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3440-S.SNP.6:31041864 chr06:031041864 0 W/31041864-31041864 FN3440-S SNP T -> A AC=2;AN=184;BQB=0.7044;DP=2457;DP4=1084,1235,20,28;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.3007e-25;MQSB=0.759157;RPB=0.966499;SGB=149.058;VDB=0.927262;EFF=INTRON(MODIFIER||||1845|LOC_Os06g51270|protein_coding|CODING|LOC_Os06g51270.1|20|1) FN4139-S.SNP.6:31047075 chr06:031047075 0 W/31047075-31047075 FN4139-S SNP T -> A AC=1;AN=170;BQB=0.941956;DP=2449;DP4=1258,1096,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.33513e-06;MQSB=0.970285;RPB=0.539391;SGB=34.5445;VDB=0.144271;EFF=SPLICE_SITE_REGION(LOW||||1845|LOC_Os06g51270|protein_coding|CODING|LOC_Os06g51270.1|6|1),INTRON(MODIFIER||||1845|LOC_Os06g51270|protein_coding|CODING|LOC_Os06g51270.1|6|1) FN762-S.SNP.6:31055682 chr06:031055682 0 W/31055682-31055682 FN762-S Single Base Substitution G-T INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1753-S.SNP.6:31059023 chr06:031059023 0 W/31059023-31059023 FN1753-S SNP A -> T AC=1;AN=188;BQB=0.000173225;DP=3426;DP4=1405,1971,19,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000142366;MQSB=0.723949;RPB=0.702628;SGB=-197.506;VDB=0.831797;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.6:31059027 chr06:031059027 0 W/31059027-31059027 FN1753-S SNP G -> A AC=1;AN=188;BQB=0.0028925;DP=3408;DP4=1422,1948,19,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.60477e-05;MQSB=0.803669;RPB=0.95592;SGB=-139.973;VDB=0.930945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.6:31060911 chr06:031060911 0 W/31060911-31060911 FN2440 SNP C -> T AC=1;AN=200;BQB=0.274465;DP=5648;DP4=2745,2570,8,9;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0148725;MQB=0.197352;MQSB=0.000103275;RPB=0.57696;SGB=-35.3156;VDB=0.391324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.6:31065061 chr06:031065061 0 W/31065061-31065061 FN2244-S SNP A -> T AC=1;AN=190;BQB=0.222775;DP=4862;DP4=2340,2225,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.33793e-09;MQSB=0.710638;RPB=0.947703;SGB=14.9883;VDB=0.435049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.6:31066709 chr06:031066709 0 W/31066709-31066709 FN3545-S SNP C -> T AC=2;AN=188;BQB=0.136427;DP=2472;DP4=1141,1255,6,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.33522e-06;MQSB=0.979476;RPB=0.523241;SGB=85.3253;VDB=0.701568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.6:31068887 chr06:031068887 0 W/31068887-31068887 FN3432-S SNP C -> A AC=1;AN=184;BQB=0.960809;DP=2563;DP4=1261,1191,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31002e-11;MQSB=0.932303;RPB=0.753915;SGB=56.8786;VDB=0.140754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.6:31076053 chr06:031076053 0 W/31076053-31076053 FN3710-S SNP G -> C AC=1;AN=190;BQB=0.964415;DP=2749;DP4=1261,1396,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.40454e-07;MQSB=0.714613;RPB=0.858374;SGB=49.0954;VDB=0.868582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E853D|1038|LOC_Os06g51310|protein_coding|CODING|LOC_Os06g51310.1|18|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E853D|1038|LOC_Os06g51310|protein_coding|CODING|LOC_Os06g51310.2|18|1) FN-292.SNP.6:31088614 chr06:031088614 0 W/31088614-31088614 FN-292 Single Base Substitution A-G INTRON HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1657-S.SNP.6:31094991 chr06:031094991 0 W/31094991-31094991 FN1657-S Single Base Substitution A-G INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1213-S.SNP.6:31099898 chr06:031099898 0 W/31099898-31099898 FN1213-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1213-S.SNP.6:31099900 chr06:031099900 0 W/31099900-31099900 FN1213-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2428.SNP.6:31104147 chr06:031104147 0 W/31104147-31104147 FN2428 SNP G -> A AC=1;AN=200;BQB=0.826238;DP=3583;DP4=1720,1707,5,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000279096;MQB=2.92851e-05;MQSB=3.48382e-10;RPB=0.995697;SGB=40.4492;VDB=0.00815823;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.6:31104333 chr06:031104333 0 W/31104333-31104333 FN-218 Single Base Substitution G-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3681-S.SNP.6:31105480 chr06:031105480 0 W/31105480-31105480 FN3681-S SNP G -> A AC=1;AN=190;BQB=0.861845;DP=2236;DP4=1257,846,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00123637;MQSB=0.874573;RPB=0.941925;SGB=21.8853;VDB=0.407048;EFF=UTR_5_PRIME(MODIFIER||892||274|LOC_Os06g51360|protein_coding|CODING|LOC_Os06g51360.2|1|1),UTR_5_PRIME(MODIFIER||55||340|LOC_Os06g51360|protein_coding|CODING|LOC_Os06g51360.1|1|1) FN3958-S.SNP.6:31105504 chr06:031105504 0 W/31105504-31105504 FN3958-S SNP A -> G AC=2;AN=168;BQB=0.707067;DP=2218;DP4=1246,771,17,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.86133e-11;MQSB=0.997376;RPB=0.94921;SGB=-72.7757;VDB=0.431673;EFF=UTR_5_PRIME(MODIFIER||868||274|LOC_Os06g51360|protein_coding|CODING|LOC_Os06g51360.2|1|1),UTR_5_PRIME(MODIFIER||31||340|LOC_Os06g51360|protein_coding|CODING|LOC_Os06g51360.1|1|1) FN2112-S.SNP.6:31113752 chr06:031113752 0 W/31113752-31113752 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.409711;DP=2075;DP4=1064,930,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.9982e-05;MQSB=0.982314;RPB=0.754811;SGB=1.32907;VDB=0.781526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.6:31117763 chr06:031117763 0 W/31117763-31117763 FN1688-S SNP G -> C AC=1;AN=188;BQB=0.517239;DP=2972;DP4=1405,1532,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000336474;MQB=2.82639e-05;MQSB=0.910454;RPB=0.537388;SGB=0.908326;VDB=0.296244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.6:31121274 chr06:031121274 0 W/31121274-31121274 FN2617-S SNP A -> T AC=1;AN=198;BQB=0.770954;DP=4023;DP4=1921,1907,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.54515e-11;MQSB=0.975531;RPB=0.986892;SGB=77.1196;VDB=0.601682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q354L|405|LOC_Os06g51380|protein_coding|CODING|LOC_Os06g51380.1|8|1),SPLICE_SITE_REGION(LOW||||405|LOC_Os06g51380|protein_coding|CODING|LOC_Os06g51380.1|8|1) FN2790-S.SNP.6:31124355 chr06:031124355 0 W/31124355-31124355 FN2790-S SNP G -> A AC=2;AN=198;BQB=0.305287;DP=3524;DP4=1795,1484,31,22;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00170261;MQB=2.34254e-20;MQSB=0.710602;RPB=0.16179;SGB=232.368;VDB=0.929877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.6:31131620 chr06:031131620 0 W/31131620-31131620 FN3767-S SNP C -> G AC=2;AN=190;BQB=0.935142;DP=2808;DP4=1340,1343,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.43896e-15;MQSB=0.994612;RPB=0.84365;SGB=54.3062;VDB=0.44341;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.6:31136424 chr06:031136424 0 W/31136424-31136424 FN2437 SNP T -> G AC=1;AN=200;BQB=0.999846;DP=4978;DP4=2389,2229,15,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.7854e-19;MQSB=0.988896;RPB=0.894002;SGB=36.7778;VDB=0.119415;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.6:31136541 chr06:031136541 0 W/31136541-31136541 FN3900-S SNP T -> A AC=1;AN=158;BQB=0.909447;DP=2534;DP4=1222,1217,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.70768e-09;MQSB=0.99142;RPB=0.257826;SGB=2.08615;VDB=0.200248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.6:31136604 chr06:031136604 0 W/31136604-31136604 FN2667-S SNP A -> G AC=2;AN=200;BQB=0.93485;DP=4664;DP4=2291,2126,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000214408;MQB=4.53271e-25;MQSB=0.969155;RPB=0.424231;SGB=102.43;VDB=0.720044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.6:31146721 chr06:031146721 0 W/31146721-31146721 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.696886;DP=2203;DP4=1139,796,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=6.04372e-05;MQSB=0.787754;RPB=0.998607;SGB=49.0954;VDB=0.345999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.6:31147120 chr06:031147120 0 W/31147120-31147120 FN3956-S SNP T -> A AC=2;AN=168;BQB=0.928151;DP=1700;DP4=966,518,8,8;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.0104e-06;MQSB=0.798118;RPB=0.973945;SGB=24.6155;VDB=0.930128;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.6:31153956 chr06:031153956 0 W/31153956-31153956 FN-342 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os06g51430 signal peptide peptidase-like 2B, putative, expressed SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3332-S.SNP.6:31169462 chr06:031169462 0 W/31169462-31169462 FN3332-S SNP A -> T AC=1;AN=184;BQB=0.907701;DP=3126;DP4=1433,1485,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23292e-14;MQSB=0.915339;RPB=0.574653;SGB=-10.0179;VDB=0.221962;EFF=UTR_5_PRIME(MODIFIER||105||799|LOC_Os06g51450|protein_coding|CODING|LOC_Os06g51450.1|1|1) FN2735-S.SNP.6:31190382 chr06:031190382 0 W/31190382-31190382 FN2735-S SNP T -> G AC=2;AN=200;BQB=0.817439;DP=4862;DP4=2506,2154,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.30549e-27;MQSB=0.763988;RPB=0.828625;SGB=52.8295;VDB=0.86745;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.6:31191438 chr06:031191438 0 W/31191438-31191438 FN1056-S Single Base Substitution G-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN698-S.SNP.6:31197012 chr06:031197012 0 W/31197012-31197012 FN698-S Single Base Substitution T-C INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN-108.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN-108 Single Base Substitution G-A INTERGENIC HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-305.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN-305 Single Base Substitution G-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1039-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN1039-S Single Base Substitution G-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1512-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN1512-S Single Base Substitution G-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1606-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN1606-S Single Base Substitution G-A INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2387.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN2387 SNP G -> A AC=2;AN=192;BQB=0.421413;DP=4828;DP4=2171,2332,31,29;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.0041425;MQB=1.75223e-12;MQSB=0.0297677;RPB=0.454661;SGB=74.6218;VDB=0.650128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN2437 SNP G -> A AC=1;AN=200;BQB=0.0159834;DP=4791;DP4=2203,2304,9,17;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00313087;MQB=3.2173e-05;MQSB=0.466322;RPB=0.150489;SGB=-8.26887;VDB=0.635343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN3282-S SNP G -> A AC=1;AN=184;BQB=0.965844;DP=3430;DP4=1649,1671,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00349854;MQB=0.00566608;MQSB=0.0521689;RPB=0.746443;SGB=48.7425;VDB=0.577979;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN488-S Single Base Substitution G-A INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN625-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN625-S Single Base Substitution G-A INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN772-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN772-S Single Base Substitution G-A INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN974-S.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN974-S Single Base Substitution G-A INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN_N1-151-7.SNP.6:31199284 chr06:031199284 0 W/31199284-31199284 FN_N1-151-7 Single Base Substitution G-A Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN3384-S.SNP.6:31200796 chr06:031200796 0 W/31200796-31200796 FN3384-S SNP A -> C AC=1;AN=184;BQB=0.976637;DP=2900;DP4=1397,1303,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.87903e-07;MQSB=0.896159;RPB=0.989406;SGB=32.2261;VDB=0.419124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.6:31205919 chr06:031205919 0 W/31205919-31205919 FN3933-S SNP A -> G AC=2;AN=158;BQB=0.994474;DP=2500;DP4=1251,1113,15,22;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.03858e-19;MQSB=0.989741;RPB=0.107239;SGB=73.5771;VDB=0.12304;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D105|451|LOC_Os06g51500|protein_coding|CODING|LOC_Os06g51500.1|1|1) FN2441.SNP.6:31207358 chr06:031207358 0 W/31207358-31207358 FN2441 SNP A -> G AC=2;AN=200;BQB=0.957673;DP=4757;DP4=2279,2121,30,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.23984e-36;MQSB=0.751279;RPB=0.462324;SGB=289.128;VDB=0.0147574;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.6:31208227 chr06:031208227 0 W/31208227-31208227 FN4325-S SNP C -> T AC=1;AN=170;BQB=0.358971;DP=1888;DP4=917,931,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000529661;MQB=0.00116783;MQSB=0.967115;RPB=0.790723;SGB=38.987;VDB=0.0461493;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.6:31210070 chr06:031210070 0 W/31210070-31210070 FN1438-S Single Base Substitution T-A INTRON HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3838-S.SNP.6:31222648 chr06:031222648 0 W/31222648-31222648 FN3838-S SNP C -> T AC=2;AN=190;BQB=0.977106;DP=2584;DP4=1246,1257,5,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.60527e-07;MQSB=0.99257;RPB=0.963836;SGB=44.5415;VDB=0.329216;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.6:31223968 chr06:031223968 0 W/31223968-31223968 FN282-S Single Base Substitution C-T INTRON HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. W313-1-1-1-1.SNP.6:31226990 chr06:031226990 0 W/31226990-31226990 W313-1-1-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-187.SNP.6:31233957 chr06:031233957 0 W/31233957-31233957 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-187.SNP.6:31233959 chr06:031233959 0 W/31233959-31233959 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN744-S.SNP.6:31234251 chr06:031234251 0 W/31234251-31234251 FN744-S Single Base Substitution G-A INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2752-S.SNP.6:31238421 chr06:031238421 0 W/31238421-31238421 FN2752-S SNP C -> T AC=2;AN=200;BQB=0.8668;DP=4812;DP4=2276,2315,7,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22062e-15;MQSB=0.998916;RPB=0.430664;SGB=76.3213;VDB=0.919712;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.6:31240342 chr06:031240342 0 W/31240342-31240342 FN-287 Single Base Substitution C-A INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2397.SNP.6:31241890 chr06:031241890 0 W/31241890-31241890 FN2397 SNP G -> A AC=1;AN=200;BQB=0.998865;DP=4336;DP4=2073,1922,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.84867e-06;MQSB=0.996331;RPB=0.424146;SGB=19.0642;VDB=0.983583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.6:31243482 chr06:031243482 0 W/31243482-31243482 FN2358 SNP C -> T AC=2;AN=192;BQB=0.0140381;DP=4697;DP4=2150,1996,19,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.59606e-16;MQSB=0.362895;RPB=0.983614;SGB=100.374;VDB=0.0777682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R42Q|299|LOC_Os06g51570|protein_coding|CODING|LOC_Os06g51570.1|1|1) FN2483.SNP.6:31247434 chr06:031247434 0 W/31247434-31247434 FN2483 SNP C -> T AC=1;AN=200;BQB=0.96005;DP=4529;DP4=2147,2217,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.83662e-07;MQSB=0.000820121;RPB=0.832948;SGB=49.6594;VDB=0.268132 FN3400-S.SNP.7:4659 chr07:000004659 0 W/4659-4659 FN3400-S SNP G -> T AC=1;AN=184;BQB=0.553205;DP=3093;DP4=1426,1506,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000323311;MQB=1.48066e-05;MQSB=0.992996;RPB=0.240681;SGB=32.2261;VDB=0.358505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.7:7924 chr07:000007924 0 W/7924-7924 FN2290 SNP A -> T AC=1;AN=192;BQB=0.368555;DP=5091;DP4=2463,2220,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.78262e-16;MQSB=0.99308;RPB=0.987423;SGB=67.3792;VDB=0.984788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.7:9812 chr07:000009812 0 W/9812-9812 FN2380 SNP C -> T AC=1;AN=192;BQB=0.898415;DP=4704;DP4=2121,2289,3,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.49016e-07;MQSB=0.664809;RPB=0.826393;SGB=44.6462;VDB=0.531513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.7:13422 chr07:000013422 0 W/13422-13422 FN2677-S SNP C -> T AC=2;AN=200;BQB=0.777939;DP=4807;DP4=2315,2281,14,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.8487e-22;MQSB=0.984453;RPB=0.892843;SGB=169.394;VDB=0.573523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.7:13550 chr07:000013550 0 W/13550-13550 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.589797;DP=3754;DP4=2128,1582,25,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.56549e-10;MQSB=0.830958;RPB=0.469834;SGB=-77.4832;VDB=0.290538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2258-S.SNP.7:13568 chr07:000013568 0 W/13568-13568 FN2258-S SNP G -> T AC=1;AN=190;BQB=0.0445278;DP=5152;DP4=2533,2161,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000388199;MQB=1.15692e-10;MQSB=0.981059;RPB=0.999806;SGB=-93.6523;VDB=0.160663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.7:16491 chr07:000016491 0 W/16491-16491 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.81399;DP=3407;DP4=1842,1480,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37024e-08;MQSB=0.997705;RPB=0.955913;SGB=35.7479;VDB=0.914306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.7:23497 chr07:000023497 0 W/23497-23497 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.999829;DP=3037;DP4=1357,1535,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33572e-10;MQSB=0.98279;RPB=0.966108;SGB=67.3108;VDB=0.509035;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.7:25562 chr07:000025562 0 W/25562-25562 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.898599;DP=2407;DP4=1134,1208,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0718737;MQB=0.891693;MQSB=2.21869e-27;RPB=0.484066;SGB=14.9986;VDB=0.423076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.7:25724 chr07:000025724 0 W/25724-25724 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.708951;DP=2263;DP4=1017,1177,5,15;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0220946;MQB=0.990171;MQSB=0;RPB=0.997655;SGB=82.0227;VDB=0.615033;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.7:30655 chr07:000030655 0 W/30655-30655 FN581-S Single Base Substitution C-T INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3900-S.SNP.7:44315 chr07:000044315 0 W/44315-44315 FN3900-S SNP C -> T AC=1;AN=158;BQB=0.450993;DP=2742;DP4=1214,1457,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.17232e-05;MQSB=0.875249;RPB=0.957376;SGB=11.9715;VDB=0.78834;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L543|572|LOC_Os07g01070|protein_coding|CODING|LOC_Os07g01070.1|1|1) FN1575-S.SNP.7:44915 chr07:000044915 0 W/44915-44915 FN1575-S Single Base Substitution C-T INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN2232-S.SNP.7:53507 chr07:000053507 0 W/53507-53507 FN2232-S SNP T -> G AC=2;AN=190;BQB=0.871134;DP=4385;DP4=2561,1391,28,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.61575e-24;MQSB=0.81487;RPB=0.614826;SGB=203.927;VDB=0.258573;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.7:59862 chr07:000059862 0 W/59862-59862 FN1219-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g01110 laccase precursor protein, putative, expressed SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2658-S.SNP.7:66470 chr07:000066470 0 W/66470-66470 FN2658-S SNP T -> A AC=1;AN=200;BQB=0.474181;DP=4883;DP4=2569,2101,17,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00286709;MQB=0.130619;MQSB=0.0673066;RPB=0.616843;SGB=23.9365;VDB=0.495969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.7:67111 chr07:000067111 0 W/67111-67111 FN3727-S SNP T -> G AC=2;AN=190;BQB=0.580341;DP=2816;DP4=1447,1249,11,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.1188e-08;MQSB=0.999866;RPB=0.486016;SGB=78.7471;VDB=0.372172;EFF=UTR_3_PRIME(MODIFIER||202||83|LOC_Os07g01114|protein_coding|CODING|LOC_Os07g01114.1|2|1) W247-2-1.SNP.7:67670 chr07:000067670 0 W/67670-67670 W247-2-1 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN697-S.SNP.7:72742 chr07:000072742 0 W/72742-72742 FN697-S Single Base Substitution A-T INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN2212-S.SNP.7:72879 chr07:000072879 0 W/72879-72879 FN2212-S SNP C -> A AC=1;AN=190;BQB=0.880249;DP=3999;DP4=1695,2091,5,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26196e-13;MQSB=0.383983;RPB=0.769539;SGB=78.7471;VDB=0.889688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.7:79458 chr07:000079458 0 W/79458-79458 FN3652-S SNP A -> T AC=1;AN=190;BQB=0.972724;DP=2291;DP4=1368,832,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000436491;MQB=7.53239e-05;MQSB=4.53397e-05;RPB=0.692337;SGB=39.9877;VDB=0.22965;EFF=SPLICE_SITE_REGION(LOW||||1501|LOC_Os07g01130|protein_coding|CODING|LOC_Os07g01130.1|5|1),INTRON(MODIFIER||||1501|LOC_Os07g01130|protein_coding|CODING|LOC_Os07g01130.1|5|1) FN4173-S.SNP.7:85577 chr07:000085577 0 W/85577-85577 FN4173-S SNP A -> G AC=1;AN=170;BQB=0.998356;DP=2250;DP4=1118,1044,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.13145e-05;MQSB=0.972103;RPB=0.338335;SGB=24.5502;VDB=0.439806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V23A|395|LOC_Os07g01140|protein_coding|CODING|LOC_Os07g01140.1|1|1) FN2207-S.SNP.7:86591 chr07:000086591 0 W/86591-86591 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.976399;DP=4676;DP4=2500,1917,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44009e-09;MQSB=0.809906;RPB=0.432389;SGB=21.1058;VDB=0.00639659;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.7:86594 chr07:000086594 0 W/86594-86594 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.96891;DP=4683;DP4=2463,1865,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28159e-08;MQSB=0.938772;RPB=0.749682;SGB=36.1006;VDB=0.0295715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.7:93174 chr07:000093174 0 W/93174-93174 FN2354 SNP G -> C AC=1;AN=192;BQB=0.944907;DP=4986;DP4=2269,2423,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200562;MQB=1.54091e-16;MQSB=0.942256;RPB=0.417098;SGB=-43.6052;VDB=0.977995;EFF=INTERGENIC(MODIFIER||||||||||1) FN569-S.SNP.7:94740 chr07:000094740 0 W/94740-94740 FN569-S Single Base Substitution C-G INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN552-S.SNP.7:98242 chr07:000098242 0 W/98242-98242 FN552-S Single Base Substitution G-A INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN337-S.SNP.7:99096 chr07:000099096 0 W/99096-99096 FN337-S Single Base Substitution A-G INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN4172-S.SNP.7:100564 chr07:000100564 0 W/100564-100564 FN4172-S SNP C -> T AC=1;AN=170;BQB=0.916974;DP=1987;DP4=1186,716,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.56993e-06;MQSB=0.74595;RPB=0.199094;SGB=38.987;VDB=0.646725;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.7:114251 chr07:000114251 0 W/114251-114251 W42-1-3S-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g01190 expressed protein SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-223.SNP.7:119652 chr07:000119652 0 W/119652-119652 FN-223 Single Base Substitution C-T INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3380-S.SNP.7:121880 chr07:000121880 0 W/121880-121880 FN3380-S SNP T -> C AC=1;AN=184;BQB=0.959255;DP=2734;DP4=1374,1298,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.92418e-06;MQSB=0.999247;RPB=0.945213;SGB=25.1826;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.7:131642 chr07:000131642 0 W/131642-131642 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.949781;DP=2753;DP4=1207,1429,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11363e-06;MQSB=0.996757;RPB=0.999915;SGB=13.188;VDB=0.902818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.7:141403 chr07:000141403 0 W/141403-141403 FN1339-S Single Base Substitution G-A INTRON HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN-402.SNP.7:141792 chr07:000141792 0 W/141792-141792 FN-402 Single Base Substitution T-C INTRON HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3714-S.SNP.7:148209 chr07:000148209 0 W/148209-148209 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.840121;DP=2939;DP4=1474,1348,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000340252;MQB=4.877e-20;MQSB=0.98343;RPB=0.343894;SGB=140.173;VDB=0.26014;EFF=INTRON(MODIFIER||||286|LOC_Os07g01250|protein_coding|CODING|LOC_Os07g01250.1|7|1) FN764-S.SNP.7:153340 chr07:000153340 0 W/153340-153340 FN764-S Single Base Substitution G-A INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1269-S.SNP.7:154068 chr07:000154068 0 W/154068-154068 FN1269-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2492.SNP.7:154846 chr07:000154846 0 W/154846-154846 FN2492 SNP G -> T AC=1;AN=200;BQB=0.907422;DP=4849;DP4=1720,2808,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57583e-12;MQSB=0.988072;RPB=0.956548;SGB=72.7161;VDB=0.803673;EFF=UTR_3_PRIME(MODIFIER||273||438|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.1|8|1),UTR_3_PRIME(MODIFIER||273||422|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.2|7|1) FN2492.SNP.7:154847 chr07:000154847 0 W/154847-154847 FN2492 SNP C -> T AC=1;AN=200;BQB=0.77269;DP=4855;DP4=1722,2720,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27815e-11;MQSB=0.991036;RPB=0.786927;SGB=39.9056;VDB=0.846027;EFF=UTR_3_PRIME(MODIFIER||272||438|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.1|8|1),UTR_3_PRIME(MODIFIER||272||422|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.2|7|1) FN3597-S.SNP.7:157349 chr07:000157349 0 W/157349-157349 FN3597-S SNP G -> A AC=2;AN=188;BQB=0.576516;DP=2164;DP4=998,1092,8,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.33198e-08;MQSB=0.974651;RPB=0.989946;SGB=36.2493;VDB=0.260787;EFF=INTRON(MODIFIER||||438|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.1|4|1),INTRON(MODIFIER||||422|LOC_Os07g01260|protein_coding|CODING|LOC_Os07g01260.2|4|1) FN2480.SNP.7:159078 chr07:000159078 0 W/159078-159078 FN2480 SNP A -> G AC=1;AN=200;BQB=0.684285;DP=7159;DP4=4782,1945,21,10;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0117335;MQB=0.879054;MQSB=0;RPB=0.863918;SGB=30.3571;VDB=0.414854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.7:161006 chr07:000161006 0 W/161006-161006 FN1158-S Single Base Substitution A-T INTRON HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3630-S.SNP.7:161684 chr07:000161684 0 W/161684-161684 FN3630-S SNP C -> G AC=1;AN=190;BQB=0.928216;DP=2986;DP4=1496,1347,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00602813;MQB=0.49583;MQSB=3.24043e-29;RPB=0.75112;SGB=21.8853;VDB=0.716164;EFF=INTRON(MODIFIER||||1468|LOC_Os07g01270|protein_coding|CODING|LOC_Os07g01270.1|2|1) FN_N1-151-7.SNP.7:162511 chr07:000162511 0 W/162511-162511 FN_N1-151-7 Single Base Substitution T-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2742-S.SNP.7:162697 chr07:000162697 0 W/162697-162697 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.842218;DP=4711;DP4=2158,2339,10,7;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0791764;MQB=0.153898;MQSB=0.00662169;RPB=0.315313;SGB=51.0851;VDB=0.0577482;EFF=INTRON(MODIFIER||||1468|LOC_Os07g01270|protein_coding|CODING|LOC_Os07g01270.1|4|1) FN2742-S.SNP.7:162698 chr07:000162698 0 W/162698-162698 FN2742-S SNP A -> T AC=1;AN=200;BQB=0.775758;DP=4711;DP4=2209,2327,9,7;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0798132;MQB=0.114064;MQSB=0.0128962;RPB=0.281146;SGB=68.0801;VDB=0.142522;EFF=INTRON(MODIFIER||||1468|LOC_Os07g01270|protein_coding|CODING|LOC_Os07g01270.1|4|1) FN2742-S.SNP.7:162700 chr07:000162700 0 W/162700-162700 FN2742-S SNP G -> T AC=1;AN=200;BQB=0.880132;DP=4711;DP4=2144,2332,12,7;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0791764;MQB=0.292531;MQSB=0.0163677;RPB=0.324749;SGB=58.2954;VDB=0.271615;EFF=INTRON(MODIFIER||||1468|LOC_Os07g01270|protein_coding|CODING|LOC_Os07g01270.1|4|1) FN1416-S.SNP.7:171031 chr07:000171031 0 W/171031-171031 FN1416-S Single Base Substitution T-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN769-S.SNP.7:173274 chr07:000173274 0 W/173274-173274 FN769-S Single Base Substitution T-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN-115.SNP.7:177475 chr07:000177475 0 W/177475-177475 FN-115 Single Base Substitution C-T INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN469-S.SNP.7:178026 chr07:000178026 0 W/178026-178026 FN469-S Single Base Substitution G-A INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN1623-S.SNP.7:183229 chr07:000183229 0 W/183229-183229 FN1623-S Single Base Substitution A-C UTR_5_PRIME Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1623-S.SNP.7:183231 chr07:000183231 0 W/183231-183231 FN1623-S Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3354-S.SNP.7:183418 chr07:000183418 0 W/183418-183418 FN3354-S SNP G -> A AC=2;AN=184;BQB=0.46497;DP=2987;DP4=1169,1705,8,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.38295e-14;MQSB=0.772762;RPB=0.958228;SGB=106.184;VDB=0.965748;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.7:183642 chr07:000183642 0 W/183642-183642 FN_777-2-1 Single Base Substitution C-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2309.SNP.7:187808 chr07:000187808 0 W/187808-187808 FN2309 SNP T -> C AC=2;AN=192;BQB=0.999405;DP=4984;DP4=2476,2143,16,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.07778e-17;MQSB=0.552591;RPB=0.455193;SGB=100.374;VDB=0.0696342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.7:189798 chr07:000189798 0 W/189798-189798 FN2556-S SNP A -> T AC=1;AN=198;BQB=0.999999;DP=2921;DP4=1020,1698,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.72745e-13;MQSB=0.867591;RPB=0.528317;SGB=-10.2651;VDB=0.765051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.7:209735 chr07:000209735 0 W/209735-209735 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.716924;DP=4517;DP4=2201,1969,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00110693;MQB=7.52856e-09;MQSB=0.0196947;RPB=0.758315;SGB=41.5369;VDB=0.988852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.7:209962 chr07:000209962 0 W/209962-209962 FN2765-S SNP G -> T AC=1;AN=192;BQB=0.340162;DP=3821;DP4=1695,1925,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0102068;MQB=0.773347;MQSB=0.435657;RPB=0.740259;SGB=26.7492;VDB=0.629558;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.7:217180 chr07:000217180 0 W/217180-217180 FN-153 Single Base Substitution C-T INTRON HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2429.SNP.7:224440 chr07:000224440 0 W/224440-224440 FN2429 SNP G -> A AC=1;AN=200;BQB=0.967842;DP=6102;DP4=2749,2738,207,28;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.378564;MQB=3.70711e-40;MQSB=0;RPB=0.883955;SGB=-4402.14;VDB=5.59966e-25;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.7:224524 chr07:000224524 0 W/224524-224524 FN2627-S SNP C -> T AC=1;AN=200;BQB=0.887998;DP=5923;DP4=2552,3023,7,7;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.219315;MQB=0.847032;MQSB=1.71947e-32;RPB=0.406688;SGB=58.8698;VDB=0.0275695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.7:227942 chr07:000227942 0 W/227942-227942 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.203544;DP=3444;DP4=1685,1546,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00319396;MQB=3.91035e-08;MQSB=0.590473;RPB=0.965188;SGB=53.8699;VDB=0.96683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.7:229861 chr07:000229861 0 W/229861-229861 FN-76 Single Base Substitution T-C INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN3494-S.SNP.7:231339 chr07:000231339 0 W/231339-231339 FN3494-S SNP G -> T AC=1;AN=184;BQB=0.9666;DP=2677;DP4=1267,1341,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0328726;MQB=0.0687472;MQSB=0.0208508;RPB=0.674223;SGB=30.6558;VDB=0.086868;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A233D|399|LOC_Os07g01360|protein_coding|CODING|LOC_Os07g01360.1|2|1) FN1050-S.SNP.7:234003 chr07:000234003 0 W/234003-234003 FN1050-S Single Base Substitution A-C INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1075-S.SNP.7:235830 chr07:000235830 0 W/235830-235830 FN1075-S Single Base Substitution A-G INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2668-S.SNP.7:237306 chr07:000237306 0 W/237306-237306 FN2668-S SNP T -> C AC=1;AN=200;BQB=0.989934;DP=5002;DP4=2387,2430,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16005e-13;MQSB=0.994165;RPB=0.995771;SGB=72.7161;VDB=0.425266;EFF=UTR_3_PRIME(MODIFIER||202||343|LOC_Os07g01370|protein_coding|CODING|LOC_Os07g01370.1|2|1) FN1546-S.SNP.7:238290 chr07:000238290 0 W/238290-238290 FN1546-S Single Base Substitution G-A INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN780-S.SNP.7:243316 chr07:000243316 0 W/243316-243316 FN780-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g01390 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN2589-S.SNP.7:243583 chr07:000243583 0 W/243583-243583 FN2589-S SNP G -> A AC=2;AN=198;BQB=0.409146;DP=3833;DP4=1849,1812,14,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00443517;MQB=1.66984e-12;MQSB=0.325998;RPB=0.77982;SGB=113.881;VDB=0.943196;EFF=INTRON(MODIFIER||||1430|LOC_Os07g01390|protein_coding|CODING|LOC_Os07g01390.1|2|1) FN3845-S.SNP.7:245140 chr07:000245140 0 W/245140-245140 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.972706;DP=2616;DP4=1234,1302,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00688073;MQB=0.0842569;MQSB=0.00775535;RPB=0.138908;SGB=30.8803;VDB=0.169891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P753L|1430|LOC_Os07g01390|protein_coding|CODING|LOC_Os07g01390.1|4|1) FN4141-S.SNP.7:248190 chr07:000248190 0 W/248190-248190 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.999937;DP=2492;DP4=1269,1156,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0128411;MQB=0.591408;MQSB=2.07036e-07;RPB=0.542693;SGB=61.2001;VDB=0.1461;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1287|1430|LOC_Os07g01390|protein_coding|CODING|LOC_Os07g01390.1|8|1) FN473-S.SNP.7:249295 chr07:000249295 0 W/249295-249295 FN473-S Single Base Substitution T-C INTERGENIC HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3380-S.SNP.7:256228 chr07:000256228 0 W/256228-256228 FN3380-S SNP T -> A AC=1;AN=184;BQB=0.504168;DP=3196;DP4=1838,1220,23,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.16391e-16;MQSB=0.960643;RPB=0.95255;SGB=-44.8382;VDB=0.956529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.7:270904 chr07:000270904 0 W/270904-270904 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN3391-S.SNP.7:286695 chr07:000286695 0 W/286695-286695 FN3391-S SNP T -> A AC=2;AN=184;BQB=0.707038;DP=3221;DP4=1228,1800,13,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.19891e-19;MQSB=0.799316;RPB=0.940409;SGB=-4.27824;VDB=0.386972;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.7:289250 chr07:000289250 0 W/289250-289250 FN968-S Single Base Substitution T-C INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN_N1-151-7.SNP.7:294696 chr07:000294696 0 W/294696-294696 FN_N1-151-7 Single Base Substitution T-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN4156-S.SNP.7:298641 chr07:000298641 0 W/298641-298641 FN4156-S SNP A -> G AC=1;AN=170;BQB=0.998222;DP=2440;DP4=1335,1023,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.4556e-08;MQSB=0.999102;RPB=0.372358;SGB=24.7692;VDB=0.910016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.7:299283 chr07:000299283 0 W/299283-299283 FN2407 SNP C -> A AC=1;AN=200;BQB=0.815687;DP=4409;DP4=2119,2034,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0497e-06;MQSB=0.986251;RPB=0.2008;SGB=21.6694;VDB=0.795841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.7:301445 chr07:000301445 0 W/301445-301445 FN2249-S SNP T -> A AC=1;AN=190;BQB=0.66363;DP=5034;DP4=2486,2224,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000595948;MQB=5.87153e-06;MQSB=0.975343;RPB=0.329974;SGB=1.00337;VDB=0.432226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-78.SNP.7:301560 chr07:000301560 0 W/301560-301560 FN-78 Single Base Substitution A-T INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2119-S.SNP.7:304468 chr07:000304468 0 W/304468-304468 FN2119-S SNP A -> T AC=2;AN=168;BQB=0.888959;DP=3063;DP4=1245,1751,8,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.04042e-20;MQSB=0.555847;RPB=0.332912;SGB=80.5243;VDB=0.373714;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.7:312636 chr07:000312636 0 W/312636-312636 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.0768109;DP=2921;DP4=1402,1468,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00205383;MQSB=0.987779;RPB=0.915934;SGB=1.32906;VDB=0.958422;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.7:313913 chr07:000313913 0 W/313913-313913 FN4234-S SNP C -> G AC=1;AN=170;BQB=0.394335;DP=2364;DP4=1213,1077,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00126904;MQB=0.000399853;MQSB=2.84749e-08;RPB=0.867114;SGB=41.7633;VDB=0.103636;EFF=INTRON(MODIFIER||||1626|LOC_Os07g01500|protein_coding|CODING|LOC_Os07g01500.1|1|1) FN2673-S.SNP.7:316921 chr07:000316921 0 W/316921-316921 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.523289;DP=4633;DP4=2109,2230,13,9;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0323764;MQB=0.532304;MQSB=7.14612e-22;RPB=0.703128;SGB=15.9106;VDB=0.415263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T818M|1626|LOC_Os07g01500|protein_coding|CODING|LOC_Os07g01500.1|5|1) FN2797-S.SNP.7:320168 chr07:000320168 0 W/320168-320168 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.884794;DP=3295;DP4=1555,1557,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00212443;MQB=0.0070487;MQSB=0.0472173;RPB=0.924003;SGB=95.5;VDB=0.254617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S951L|984|LOC_Os07g01510|protein_coding|CODING|LOC_Os07g01510.1|3|1) FN3732-S.SNP.7:348171 chr07:000348171 0 W/348171-348171 FN3732-S SNP T -> C AC=2;AN=190;BQB=0.997446;DP=2725;DP4=1246,1262,9,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.31771e-11;MQSB=0.917883;RPB=0.987717;SGB=44.0907;VDB=0.801177;EFF=INTRON(MODIFIER||||761|LOC_Os07g01550|protein_coding|CODING|LOC_Os07g01550.1|4|1) FN2347.SNP.7:354321 chr07:000354321 0 W/354321-354321 FN2347 SNP G -> A AC=2;AN=192;BQB=0.997408;DP=4757;DP4=2124,2358,23,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.0472e-22;MQSB=0.999826;RPB=0.99943;SGB=150.275;VDB=0.996735;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.7:365891 chr07:000365891 0 W/365891-365891 W466-5-1 Single Base Substitution G-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN461-S.SNP.7:367837 chr07:000367837 0 W/367837-367837 FN461-S Single Base Substitution A-C INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN2119-S.SNP.7:369519 chr07:000369519 0 W/369519-369519 FN2119-S SNP C -> T AC=2;AN=168;BQB=0.992917;DP=3481;DP4=1619,1795,13,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.90618e-18;MQSB=0.955155;RPB=0.735941;SGB=-6.75618;VDB=0.095379;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.7:371115 chr07:000371115 0 W/371115-371115 FN4128-S SNP C -> T AC=1;AN=182;BQB=0.988713;DP=3040;DP4=1491,1448,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.57719e-07;MQSB=0.939284;RPB=0.921277;SGB=25.0952;VDB=0.181735;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.7:373512 chr07:000373512 0 W/373512-373512 FN2428 SNP G -> T AC=1;AN=200;BQB=0.981249;DP=4065;DP4=1735,2084,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67001e-09;MQSB=0.99857;RPB=0.0775949;SGB=29.4849;VDB=0.0251639;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.7:376764 chr07:000376764 0 W/376764-376764 FN854-S Single Base Substitution C-T INTRON HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3667-S.SNP.7:381070 chr07:000381070 0 W/381070-381070 FN3667-S SNP A -> C AC=2;AN=190;BQB=0.988475;DP=2783;DP4=1284,1358,5,11;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0104204;MQB=5.25572e-05;MQSB=0.818265;RPB=0.0681034;SGB=46.7622;VDB=0.103143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.7:382305 chr07:000382305 0 W/382305-382305 FN3308-S SNP A -> G AC=1;AN=184;BQB=0.967078;DP=3192;DP4=1191,1737,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.0267e-11;MQSB=0.302368;RPB=0.834075;SGB=38.4058;VDB=0.658528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.7:382306 chr07:000382306 0 W/382306-382306 FN3308-S SNP G -> T AC=1;AN=184;BQB=0.893812;DP=3175;DP4=1349,1757,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5218e-11;MQSB=0.244466;RPB=0.381386;SGB=75.8731;VDB=0.303136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.7:386793 chr07:000386793 0 W/386793-386793 FN3532-S SNP A -> C AC=1;AN=188;BQB=0.930185;DP=4832;DP4=1978,2643,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0620861;MQB=0.112556;MQSB=0;RPB=0.950222;SGB=74.9605;VDB=0.99933;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.7:386795 chr07:000386795 0 W/386795-386795 FN3532-S SNP T -> A AC=1;AN=188;BQB=0.984346;DP=4804;DP4=1949,2655,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0691091;MQB=0.0447919;MQSB=0;RPB=0.925192;SGB=38.7926;VDB=0.999803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.7:399350 chr07:000399350 0 W/399350-399350 FN3297-S SNP G -> T AC=1;AN=184;BQB=0.955816;DP=3449;DP4=1787,1500,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91334e-07;MQSB=0.76852;RPB=0.500991;SGB=66.8296;VDB=0.500904;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.7:400937 chr07:000400937 0 W/400937-400937 FN620-S Single Base Substitution C-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2467.SNP.7:410103 chr07:000410103 0 W/410103-410103 FN2467 SNP G -> A AC=1;AN=200;BQB=0.987718;DP=4262;DP4=1885,2058,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.38377e-18;MQSB=0.983279;RPB=0.965807;SGB=97.9523;VDB=0.460946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.7:416011 chr07:000416011 0 W/416011-416011 FN1176-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2683-S.SNP.7:416868 chr07:000416868 0 W/416868-416868 FN2683-S SNP A -> T AC=1;AN=200;BQB=0.999117;DP=5154;DP4=2398,2528,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48763e-15;MQSB=0.880937;RPB=0.913128;SGB=97.9523;VDB=0.175799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.7:430241 chr07:000430241 0 W/430241-430241 FN3470-S SNP C -> T AC=1;AN=184;BQB=0.973467;DP=2669;DP4=1458,1145,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22411e-08;MQSB=0.983146;RPB=0.364403;SGB=53.2642;VDB=0.164222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P235L|551|LOC_Os07g01720|protein_coding|CODING|LOC_Os07g01720.1|2|1) FN2488.SNP.7:433011 chr07:000433011 0 W/433011-433011 FN2488 SNP G -> T AC=1;AN=200;BQB=0.971192;DP=4932;DP4=2631,2037,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000202757;MQB=4.41779e-06;MQSB=0.824453;RPB=0.565293;SGB=22.2439;VDB=0.364077;EFF=INTRON(MODIFIER||||475|LOC_Os07g01730|protein_coding|CODING|LOC_Os07g01730.1|5|1) FN1030-S.SNP.7:437583 chr07:000437583 0 W/437583-437583 FN1030-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2723-S.SNP.7:454764 chr07:000454764 0 W/454764-454764 FN2723-S SNP G -> A AC=2;AN=200;BQB=0.952232;DP=5240;DP4=2404,2538,12,10;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000572519;MQB=8.12902e-08;MQSB=0.855109;RPB=0.94381;SGB=95.7111;VDB=0.652939;EFF=INTRON(MODIFIER||||549|LOC_Os07g01770|protein_coding|CODING|LOC_Os07g01770.1|5|1) FN-68.SNP.7:456654 chr07:000456654 0 W/456654-456654 FN-68 Single Base Substitution G-A INTRON HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1006-S.SNP.7:456654 chr07:000456654 0 W/456654-456654 FN1006-S Single Base Substitution G-A INTRON HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3297-S.SNP.7:456654 chr07:000456654 0 W/456654-456654 FN3297-S SNP G -> A AC=2;AN=184;BQB=0.742101;DP=3161;DP4=1564,1439,14,14;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=6.47477e-10;MQSB=0.834759;RPB=0.986901;SGB=56.0583;VDB=0.960627;EFF=INTRON(MODIFIER||||549|LOC_Os07g01770|protein_coding|CODING|LOC_Os07g01770.1|4|1) FN3919-S.SNP.7:456654 chr07:000456654 0 W/456654-456654 FN3919-S SNP G -> A AC=2;AN=158;BQB=0.99671;DP=2600;DP4=1271,1189,20,16;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=2.48358e-11;MQSB=0.717223;RPB=0.581433;SGB=151.934;VDB=0.278694;EFF=INTRON(MODIFIER||||549|LOC_Os07g01770|protein_coding|CODING|LOC_Os07g01770.1|4|1) FN487-S.SNP.7:456654 chr07:000456654 0 W/456654-456654 FN487-S Single Base Substitution G-A INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. W443-5-1-3.SNP.7:456654 chr07:000456654 0 W/456654-456654 W443-5-1-3 Single Base Substitution G-A INTRON HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3664-S.SNP.7:462462 chr07:000462462 0 W/462462-462462 FN3664-S SNP T -> A AC=1;AN=190;BQB=0.433491;DP=3062;DP4=1602,1269,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000295961;MQSB=0.944248;RPB=0.989718;SGB=2.55724;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.7:466524 chr07:000466524 0 W/466524-466524 FN2544-S SNP C -> T AC=2;AN=198;BQB=0.999788;DP=4554;DP4=1834,2446,19,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.33868e-20;MQSB=0.962318;RPB=0.825515;SGB=83.8419;VDB=0.729541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.7:466524 chr07:000466524 0 W/466524-466524 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.894609;DP=2999;DP4=1178,1657,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92043e-09;MQSB=0.997432;RPB=0.958356;SGB=58.2031;VDB=0.500099;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.7:466524 chr07:000466524 0 W/466524-466524 FN489-S Single Base Substitution C-T INTERGENIC HOMO SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN926-S.SNP.7:466524 chr07:000466524 0 W/466524-466524 FN926-S Single Base Substitution C-T INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-131.SNP.7:470834 chr07:000470834 0 W/470834-470834 FN-131 Single Base Substitution C-T INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN1465-S.SNP.7:482629 chr07:000482629 0 W/482629-482629 FN1465-S Single Base Substitution T-C INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2652-S.SNP.7:485240 chr07:000485240 0 W/485240-485240 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.999621;DP=4876;DP4=2409,2194,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4069e-16;MQSB=0.999266;RPB=0.882148;SGB=63.3521;VDB=0.849155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.7:487132 chr07:000487132 0 W/487132-487132 FN1400-S Single Base Substitution C-A INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN3308-S.SNP.7:491621 chr07:000491621 0 W/491621-491621 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.991347;DP=2832;DP4=1464,1264,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.69415e-08;MQSB=0.97384;RPB=0.99979;SGB=32.2261;VDB=0.416493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S3L|115|LOC_Os07g01830|protein_coding|CODING|LOC_Os07g01830.1|1|1) FN1287-S.SNP.7:492811 chr07:000492811 0 W/492811-492811 FN1287-S Single Base Substitution C-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2715-S.SNP.7:502927 chr07:000502927 0 W/502927-502927 FN2715-S SNP A -> T AC=1;AN=200;BQB=0.668012;DP=4869;DP4=2334,2279,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.78273e-12;MQSB=0.991445;RPB=0.364504;SGB=47.7211;VDB=0.44824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.7:506126 chr07:000506126 0 W/506126-506126 FN1586-S Single Base Substitution C-G INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1499-S.SNP.7:524749 chr07:000524749 0 W/524749-524749 FN1499-S Single Base Substitution A-C INTRON HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4084-S.SNP.7:536391 chr07:000536391 0 W/536391-536391 FN4084-S SNP A -> T AC=2;AN=182;BQB=0.974734;DP=2910;DP4=1499,1306,8,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.85049e-10;MQSB=0.955908;RPB=0.995028;SGB=62.1548;VDB=0.646165;EFF=UTR_3_PRIME(MODIFIER||719||125|LOC_Os07g01890|protein_coding|CODING|LOC_Os07g01890.1|4|1),UTR_3_PRIME(MODIFIER||719||125|LOC_Os07g01890|protein_coding|CODING|LOC_Os07g01890.2|3|1) FN4084-S.SNP.7:536392 chr07:000536392 0 W/536392-536392 FN4084-S SNP C -> A AC=2;AN=182;BQB=0.733105;DP=2918;DP4=1371,1345,9,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.62394e-10;MQSB=0.966295;RPB=0.742432;SGB=25.655;VDB=0.776679;EFF=UTR_3_PRIME(MODIFIER||718||125|LOC_Os07g01890|protein_coding|CODING|LOC_Os07g01890.1|4|1),UTR_3_PRIME(MODIFIER||718||125|LOC_Os07g01890|protein_coding|CODING|LOC_Os07g01890.2|3|1) FN3536-S.SNP.7:538473 chr07:000538473 0 W/538473-538473 FN3536-S SNP C -> T AC=1;AN=188;BQB=0.550789;DP=1718;DP4=847,796,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29063e-05;MQSB=0.630096;RPB=0.603768;SGB=32.441;VDB=0.646266;EFF=INTRON(MODIFIER||||127|LOC_Os07g01900|protein_coding|CODING|LOC_Os07g01900.1|1|1) FN4084-S.SNP.7:538583 chr07:000538583 0 W/538583-538583 FN4084-S SNP G -> T AC=2;AN=182;BQB=0.999629;DP=2181;DP4=1334,757,12,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.20816e-10;MQSB=0.796224;RPB=0.6287;SGB=80.1982;VDB=0.798877;EFF=INTRON(MODIFIER||||127|LOC_Os07g01900|protein_coding|CODING|LOC_Os07g01900.1|1|1) FN733-S.SNP.7:548407 chr07:000548407 0 W/548407-548407 FN733-S Single Base Substitution A-T INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN524-S.SNP.7:555226 chr07:000555226 0 W/555226-555226 FN524-S Single Base Substitution T-C INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN3709-S.SNP.7:566388 chr07:000566388 0 W/566388-566388 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.971236;DP=2731;DP4=1181,1448,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000209068;MQSB=0.968212;RPB=0.430288;SGB=18.3316;VDB=0.603537;EFF=INTERGENIC(MODIFIER||||||||||1) FN515-S.SNP.7:567552 chr07:000567552 0 W/567552-567552 FN515-S Single Base Substitution T-C INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN3364-S.SNP.7:578085 chr07:000578085 0 W/578085-578085 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.584095;DP=2528;DP4=1272,1161,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.66157e-05;MQSB=0.996461;RPB=0.862366;SGB=21.6609;VDB=0.914396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L364F|984|LOC_Os07g01940|protein_coding|CODING|LOC_Os07g01940.1|8|1) FN2223-S.SNP.7:594764 chr07:000594764 0 W/594764-594764 FN2223-S SNP A -> T AC=1;AN=190;BQB=0.897717;DP=5002;DP4=2407,2256,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.34544e-07;MQSB=0.570379;RPB=0.990741;SGB=18.552;VDB=0.47314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.7:596157 chr07:000596157 0 W/596157-596157 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.634953;DP=2767;DP4=1568,1119,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.53922e-06;MQSB=0.954728;RPB=0.951197;SGB=18.4463;VDB=0.621197;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.7:598997 chr07:000598997 0 W/598997-598997 FN1039-S Single Base Substitution G-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1494-S.SNP.7:602609 chr07:000602609 0 W/602609-602609 FN1494-S Single Base Substitution T-G INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2388.SNP.7:602767 chr07:000602767 0 W/602767-602767 FN2388 SNP G -> A AC=1;AN=200;BQB=0.802756;DP=4277;DP4=1528,2507,4,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.67678e-07;MQSB=0.00401885;RPB=0.859173;SGB=47.4799;VDB=0.65825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.7:606045 chr07:000606045 0 W/606045-606045 FN1023-S Single Base Substitution C-T INTRON HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3828-S.SNP.7:612841 chr07:000612841 0 W/612841-612841 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.965807;DP=3205;DP4=1551,1546,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.94605e-05;MQSB=0.265078;RPB=0.994227;SGB=30.8803;VDB=0.0140615;EFF=INTRON(MODIFIER||||404|LOC_Os07g02030|protein_coding|CODING|LOC_Os07g02030.1|1|1) FN1532-S.SNP.7:613067 chr07:000613067 0 W/613067-613067 FN1532-S Single Base Substitution C-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2433.SNP.7:614100 chr07:000614100 0 W/614100-614100 FN2433 SNP A -> T AC=1;AN=200;BQB=0.974689;DP=4516;DP4=2404,1865,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.77451e-17;MQSB=0.997189;RPB=0.22695;SGB=60.747;VDB=0.815581;EFF=INTRON(MODIFIER||||404|LOC_Os07g02030|protein_coding|CODING|LOC_Os07g02030.1|1|1) W596-1-1.SNP.7:623610 chr07:000623610 0 W/623610-623610 W596-1-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g02040 expressed protein SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN2575-S.SNP.7:630469 chr07:000630469 0 W/630469-630469 FN2575-S SNP C -> A AC=1;AN=198;BQB=0.978953;DP=3956;DP4=1981,1687,23,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.99739e-25;MQSB=0.98977;RPB=0.999977;SGB=178.212;VDB=0.84739;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.7:642045 chr07:000642045 0 W/642045-642045 FN-261 Single Base Substitution G-A INTERGENIC HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN2374.SNP.7:643427 chr07:000643427 0 W/643427-643427 FN2374 SNP C -> A AC=1;AN=192;BQB=0.0168088;DP=5057;DP4=2486,2275,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.16045e-07;MQSB=0.922553;RPB=0.400101;SGB=21.2209;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.7:645671 chr07:000645671 0 W/645671-645671 FN3444-S SNP A -> G AC=1;AN=184;BQB=0.947202;DP=2863;DP4=921,1819,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000110939;MQSB=2.58566e-05;RPB=0.972029;SGB=39.699;VDB=0.928815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.7:646099 chr07:000646099 0 W/646099-646099 FN3294-S SNP A -> G AC=1;AN=184;BQB=0.769636;DP=2815;DP4=1677,978,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0507993;MQB=0.012384;MQSB=0.169653;RPB=0.268182;SGB=48.7425;VDB=0.187282;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.7:646886 chr07:000646886 0 W/646886-646886 FN4182-S SNP T -> A AC=1;AN=170;BQB=0.962668;DP=2575;DP4=1040,1413,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000303634;MQSB=0.973354;RPB=0.978024;SGB=30.1021;VDB=0.605835;EFF=INTRON(MODIFIER||||102|LOC_Os07g02070|protein_coding|CODING|LOC_Os07g02070.1|1|1) W385-6-8-4.SNP.7:648851 chr07:000648851 0 W/648851-648851 W385-6-8-4 Single Base Substitution G-A INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2432.SNP.7:664386 chr07:000664386 0 W/664386-664386 FN2432 SNP T -> A AC=1;AN=200;BQB=0.726206;DP=4133;DP4=1476,2279,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.38595e-10;MQSB=0.0694812;RPB=0.600507;SGB=61.9006;VDB=0.663901;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.7:671175 chr07:000671175 0 W/671175-671175 FN4229-S SNP T -> C AC=1;AN=170;BQB=0.98482;DP=2597;DP4=1177,1298,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.94952e-09;MQSB=0.753578;RPB=0.689764;SGB=56.7575;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.7:671347 chr07:000671347 0 W/671347-671347 FN1250-S Single Base Substitution A-C INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN3431-S.SNP.7:674695 chr07:000674695 0 W/674695-674695 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.602583;DP=3423;DP4=1267,1992,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.00817e-09;MQSB=0.917628;RPB=0.252765;SGB=-14.714;VDB=0.38211;EFF=UTR_3_PRIME(MODIFIER||92||476|LOC_Os07g02120|protein_coding|CODING|LOC_Os07g02120.1|1|1) FN886-S.SNP.7:693725 chr07:000693725 0 W/693725-693725 FN886-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g02180 3-5 exonuclease domain-containing protein, putative, expressed SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2497.SNP.7:696552 chr07:000696552 0 W/696552-696552 FN2497 SNP T -> G AC=1;AN=200;BQB=0.900525;DP=5167;DP4=2275,2426,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000193536;MQB=2.28801e-07;MQSB=0.991067;RPB=0.304164;SGB=45.0543;VDB=0.807529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.7:699493 chr07:000699493 0 W/699493-699493 FN3949-S SNP C -> A AC=1;AN=168;BQB=0.300012;DP=1980;DP4=713,1171,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00672131;MQSB=0.799403;RPB=0.814965;SGB=21.0249;VDB=0.885341;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.7:701701 chr07:000701701 0 W/701701-701701 FN411-S Single Base Substitution G-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN411-S.SNP.7:701702 chr07:000701702 0 W/701702-701702 FN411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN411-S.SNP.7:701722 chr07:000701722 0 W/701722-701722 FN411-S Single Base Substitution A-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2530-S.SNP.7:707138 chr07:000707138 0 W/707138-707138 FN2530-S SNP A -> G AC=2;AN=198;BQB=0.228046;DP=3873;DP4=1722,1795,25,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.38967e-29;MQSB=0.897742;RPB=0.773607;SGB=224.163;VDB=0.979398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I43V|2021|LOC_Os07g02230|protein_coding|CODING|LOC_Os07g02230.1|1|1) FN2754-S.SNP.7:708724 chr07:000708724 0 W/708724-708724 FN2754-S SNP T -> G AC=1;AN=200;BQB=0.585871;DP=4449;DP4=2117,1974,3,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.05522e-05;MQSB=0.769457;RPB=0.623973;SGB=25.849;VDB=0.342083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L147R|2021|LOC_Os07g02230|protein_coding|CODING|LOC_Os07g02230.1|3|1) FN521-S.SNP.7:718708 chr07:000718708 0 W/718708-718708 FN521-S Single Base Substitution A-T INTRON HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN-221.SNP.7:720920 chr07:000720920 0 W/720920-720920 FN-221 Single Base Substitution T-G INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN-210.SNP.7:725512 chr07:000725512 0 W/725512-725512 FN-210 Single Base Substitution A-T INTRON HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3786-S.SNP.7:728376 chr07:000728376 0 W/728376-728376 FN3786-S SNP G -> A AC=2;AN=190;BQB=0.887872;DP=2645;DP4=1257,1290,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31311e-12;MQSB=0.999013;RPB=0.578919;SGB=94.6341;VDB=0.92198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.7:737847 chr07:000737847 0 W/737847-737847 FN1234-S Single Base Substitution A-G INTRON HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1667-S.SNP.7:739180 chr07:000739180 0 W/739180-739180 FN1667-S SNP T -> A AC=1;AN=188;BQB=0.872627;DP=4543;DP4=2126,2358,15,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.26127e-13;MQSB=0.95804;RPB=0.784529;SGB=-86.6665;VDB=0.0192737;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.7:754380 chr07:000754380 0 W/754380-754380 W278-3-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g02300 tetratricopeptide repeat domain containing protein, expressed SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2320.SNP.7:754605 chr07:000754605 0 W/754605-754605 FN2320 SNP T -> G AC=1;AN=192;BQB=0.146362;DP=4706;DP4=2366,2053,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.19339e-12;MQSB=0.966475;RPB=0.744231;SGB=78.9878;VDB=0.865035;EFF=INTRON(MODIFIER||||1011|LOC_Os07g02300|protein_coding|CODING|LOC_Os07g02300.1|21|1),INTRON(MODIFIER||||908|LOC_Os07g02300|protein_coding|CODING|LOC_Os07g02300.2|22|1) FN1525-S.SNP.7:755823 chr07:000755823 0 W/755823-755823 FN1525-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g02300 tetratricopeptide repeat domain containing protein, expressed SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1525-S.SNP.7:755824 chr07:000755824 0 W/755824-755824 FN1525-S Single Base Substitution C-A STOP_GAINED HET LOC_Os07g02300 tetratricopeptide repeat domain containing protein, expressed SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2381.SNP.7:774888 chr07:000774888 0 W/774888-774888 FN2381 SNP G -> T AC=2;AN=192;BQB=0.316691;DP=5036;DP4=2427,2345,30,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.88144e-24;MQSB=0.459495;RPB=0.800335;SGB=218.091;VDB=0.38037;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.7:778740 chr07:000778740 0 W/778740-778740 FN-169 Single Base Substitution A-T INTERGENIC HOMO SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3864-S.SNP.7:784769 chr07:000784769 0 W/784769-784769 FN3864-S SNP T -> A AC=2;AN=158;BQB=0.507523;DP=1824;DP4=727,1001,13,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.87429e-14;MQSB=0.666495;RPB=0.990968;SGB=95.131;VDB=0.874124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.7:784770 chr07:000784770 0 W/784770-784770 FN3864-S SNP A -> T AC=2;AN=158;BQB=0.976613;DP=1814;DP4=684,999,14,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.50879e-13;MQSB=0.608728;RPB=0.939574;SGB=67.7679;VDB=0.735316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.7:786271 chr07:000786271 0 W/786271-786271 FN1506-S Single Base Substitution A-T INTERGENIC Homo SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1686-S.SNP.7:794170 chr07:000794170 0 W/794170-794170 FN1686-S SNP C -> A AC=1;AN=188;BQB=0.509475;DP=3602;DP4=1695,1876,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.66158e-06;MQSB=0.987784;RPB=0.455318;SGB=35.9843;VDB=0.74314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1435-S.SNP.7:795231 chr07:000795231 0 W/795231-795231 FN1435-S Single Base Substitution G-A INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN4143-S.SNP.7:795243 chr07:000795243 0 W/795243-795243 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.978652;DP=2529;DP4=1172,1286,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84339e-08;MQSB=0.922823;RPB=0.301408;SGB=52.3148;VDB=0.381043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.7:795463 chr07:000795463 0 W/795463-795463 FN3401-S SNP A -> C AC=1;AN=184;BQB=0.672949;DP=2623;DP4=1277,1261,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.77395e-06;MQSB=0.975986;RPB=0.616332;SGB=42.7914;VDB=0.600856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.7:798984 chr07:000798984 0 W/798984-798984 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.969179;DP=2544;DP4=1204,1270,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000393082;MQB=2.33017e-11;MQSB=0.990302;RPB=0.99932;SGB=71.3514;VDB=0.375242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3470-S.SNP.7:798985 chr07:000798985 0 W/798985-798985 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.606412;DP=2533;DP4=1199,1254,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000394789;MQB=9.38691e-11;MQSB=0.987345;RPB=0.934113;SGB=75.8731;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.7:800106 chr07:000800106 0 W/800106-800106 FN2292 SNP C -> T AC=1;AN=192;BQB=0.78821;DP=5062;DP4=2460,2316,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.62465e-11;MQSB=0.543982;RPB=0.00175117;SGB=24.5626;VDB=0.683163;EFF=INTRON(MODIFIER||||333|LOC_Os07g02350|protein_coding|CODING|LOC_Os07g02350.1|9|1) FN2255-S.SNP.7:828702 chr07:000828702 0 W/828702-828702 FN2255-S SNP C -> A AC=2;AN=190;BQB=0.274588;DP=4357;DP4=2174,1835,12,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.78239e-12;MQSB=0.605965;RPB=0.993954;SGB=60.9777;VDB=0.74324;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.7:831442 chr07:000831442 0 W/831442-831442 FN1262-S Single Base Substitution G-T INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2785-S.SNP.7:834391 chr07:000834391 0 W/834391-834391 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.0195515;DP=4122;DP4=1977,1875,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70647e-06;MQSB=0.957485;RPB=0.954845;SGB=-13.8358;VDB=0.730039;EFF=UTR_3_PRIME(MODIFIER||388||243|LOC_Os07g02430|protein_coding|CODING|LOC_Os07g02430.1|1|1) 701-3.SNP.7:835686 chr07:000835686 0 W/835686-835686 701-3 Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN-153.SNP.7:836258 chr07:000836258 0 W/836258-836258 FN-153 Single Base Substitution C-T INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-388.SNP.7:836258 chr07:000836258 0 W/836258-836258 FN-388 Single Base Substitution C-T INTERGENIC HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN320-S.SNP.7:842601 chr07:000842601 0 W/842601-842601 FN320-S Single Base Substitution C-A INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN579-S.SNP.7:843760 chr07:000843760 0 W/843760-843760 FN579-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g02450 receptor-like protein kinase 2 precursor, putative, expressed SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2122-S.SNP.7:844457 chr07:000844457 0 W/844457-844457 FN2122-S SNP G -> C AC=1;AN=168;BQB=0.993729;DP=2806;DP4=1125,1612,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.70726e-07;MQSB=0.99091;RPB=0.903635;SGB=1.32907;VDB=0.20996;EFF=INTRON(MODIFIER||||613|LOC_Os07g02450|protein_coding|CODING|LOC_Os07g02450.1|3|1) FN3941-S.SNP.7:846656 chr07:000846656 0 W/846656-846656 FN3941-S SNP C -> A AC=1;AN=168;BQB=0.996392;DP=2885;DP4=1513,1271,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30938e-08;MQSB=0.989265;RPB=0.832931;SGB=34.748;VDB=0.417606;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.7:847522 chr07:000847522 0 W/847522-847522 FN833-S Single Base Substitution A-G INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1525-S.SNP.7:861909 chr07:000861909 0 W/861909-861909 FN1525-S Single Base Substitution T-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3804-S.SNP.7:868558 chr07:000868558 0 W/868558-868558 FN3804-S SNP C -> A AC=1;AN=190;BQB=0.95562;DP=3176;DP4=1927,1185,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00566751;MQB=0.0606867;MQSB=1.81996e-06;RPB=0.99344;SGB=39.9877;VDB=0.57381;EFF=SPLICE_SITE_DONOR(HIGH||||1799|LOC_Os07g02490|protein_coding|CODING|LOC_Os07g02490.1|3|1),INTRON(MODIFIER||||1799|LOC_Os07g02490|protein_coding|CODING|LOC_Os07g02490.1|3|1);LOF=(LOC_Os07g02490|LOC_Os07g02490|1|1.00) FN-314.SNP.7:869581 chr07:000869581 0 W/869581-869581 FN-314 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g02490 retrotransposon protein, putative, unclassified, expressed SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-293.SNP.7:870122 chr07:000870122 0 W/870122-870122 FN-293 Single Base Substitution C-T INTRON HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN4011-S.SNP.7:870773 chr07:000870773 0 W/870773-870773 FN4011-S SNP T -> A AC=1;AN=168;BQB=0.975918;DP=2398;DP4=1159,1088,17,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.45234e-12;MQSB=0.987358;RPB=0.42139;SGB=34.3388;VDB=0.6496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E214V|1799|LOC_Os07g02490|protein_coding|CODING|LOC_Os07g02490.1|2|1) FN4011-S.SNP.7:870774 chr07:000870774 0 W/870774-870774 FN4011-S SNP C -> A AC=1;AN=168;BQB=0.999563;DP=2409;DP4=1201,1127,15,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.91938e-12;MQSB=0.987604;RPB=0.935997;SGB=78.7577;VDB=0.702791;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E214*|1799|LOC_Os07g02490|protein_coding|CODING|LOC_Os07g02490.1|2|1);LOF=(LOC_Os07g02490|LOC_Os07g02490|1|1.00);NMD=(LOC_Os07g02490|LOC_Os07g02490|1|1.00) FN4114-S.SNP.7:871754 chr07:000871754 0 W/871754-871754 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.999996;DP=2666;DP4=1179,1388,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000375094;MQB=1.45819e-07;MQSB=0.939674;RPB=0.880887;SGB=57.644;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.7:892722 chr07:000892722 0 W/892722-892722 FN3528-S SNP G -> T AC=1;AN=188;BQB=0.973924;DP=3260;DP4=1288,1690,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.50818e-12;MQSB=0.892249;RPB=0.350913;SGB=-11.74;VDB=0.781586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.7:892723 chr07:000892723 0 W/892723-892723 FN3528-S SNP A -> T AC=1;AN=188;BQB=0.999713;DP=3246;DP4=1320,1754,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.10913e-12;MQSB=0.949671;RPB=0.229604;SGB=57.244;VDB=0.66569;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.7:893362 chr07:000893362 0 W/893362-893362 FN454-S Single Base Substitution A-G INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3387-S.SNP.7:898606 chr07:000898606 0 W/898606-898606 FN3387-S SNP T -> C AC=1;AN=184;BQB=0.980675;DP=1638;DP4=1381,160,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.98767e-05;MQSB=0.187669;RPB=0.973719;SGB=35.1773;VDB=0.0974914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.7:909078 chr07:000909078 0 W/909078-909078 FN1030-S Single Base Substitution T-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2207-S.SNP.7:911784 chr07:000911784 0 W/911784-911784 FN2207-S SNP A -> T AC=1;AN=190;BQB=0.428988;DP=5334;DP4=2521,2557,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76066e-09;MQSB=0.961903;RPB=0.202194;SGB=53.8699;VDB=0.126405;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.7:914496 chr07:000914496 0 W/914496-914496 FN4203-S SNP A -> G AC=1;AN=170;BQB=0.488045;DP=2054;DP4=896,1060,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000180692;MQSB=0.00791252;RPB=0.532773;SGB=27.9928;VDB=0.434289;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.7:915777 chr07:000915777 0 W/915777-915777 FN691-S Single Base Substitution C-T INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3355-S.SNP.7:918120 chr07:000918120 0 W/918120-918120 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.920864;DP=2933;DP4=1459,1337,23,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30328e-16;MQSB=0.381366;RPB=0.902206;SGB=148.222;VDB=0.45444;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.7:922426 chr07:000922426 0 W/922426-922426 FN743-S Single Base Substitution C-T INTERGENIC HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2129-S.SNP.7:925081 chr07:000925081 0 W/925081-925081 FN2129-S SNP T -> C AC=2;AN=168;BQB=0.471541;DP=4288;DP4=2036,2157,29,51;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.90037e-38;MQSB=0.896319;RPB=0.144282;SGB=-56.1375;VDB=0.958005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.7:925375 chr07:000925375 0 W/925375-925375 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.862249;DP=2678;DP4=1252,1355,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.49324e-08;MQSB=0.946591;RPB=0.939639;SGB=20.9896;VDB=0.44694;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S488|510|LOC_Os07g02570|protein_coding|CODING|LOC_Os07g02570.1|1|1) FN2721-S.SNP.7:938135 chr07:000938135 0 W/938135-938135 FN2721-S SNP G -> C AC=1;AN=200;BQB=0.689073;DP=4676;DP4=2159,2298,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00106929;MQB=2.89096e-10;MQSB=0.380213;RPB=0.944279;SGB=7.88476;VDB=0.615593;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.7:938167 chr07:000938167 0 W/938167-938167 FN2473 SNP A -> T AC=1;AN=200;BQB=0.501701;DP=4256;DP4=2032,1792,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00117481;MQB=1.34717e-07;MQSB=0.290995;RPB=0.997608;SGB=4.67442;VDB=0.9468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.7:943188 chr07:000943188 0 W/943188-943188 FN1263-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN593-S.SNP.7:943505 chr07:000943505 0 W/943505-943505 FN593-S Single Base Substitution C-A INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN230-S.SNP.7:943725 chr07:000943725 0 W/943725-943725 FN230-S Single Base Substitution A-T INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN-22.SNP.7:962449 chr07:000962449 0 W/962449-962449 FN-22 Single Base Substitution A-T INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3427-S.SNP.7:974586 chr07:000974586 0 W/974586-974586 FN3427-S SNP A -> T AC=1;AN=184;BQB=0.98381;DP=3179;DP4=1684,1417,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.46477e-06;MQSB=0.904579;RPB=0.419812;SGB=35.1773;VDB=0.851014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.7:974785 chr07:000974785 0 W/974785-974785 FN1188-S Single Base Substitution G-A INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2344.SNP.7:975658 chr07:000975658 0 W/975658-975658 FN2344 SNP A -> G AC=1;AN=192;BQB=0.70207;DP=4793;DP4=2195,2324,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.53208e-18;MQSB=0.944458;RPB=0.537452;SGB=67.3792;VDB=0.0123148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.7:985734 chr07:000985734 0 W/985734-985734 FN2211-S SNP A -> G AC=1;AN=190;BQB=0.629203;DP=5037;DP4=2432,2375,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198531;MQB=5.80351e-08;MQSB=0.276566;RPB=0.64802;SGB=43.2083;VDB=0.218802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.7:1002625 chr07:001002625 0 W/1002625-1002625 FN3393-S SNP C -> A AC=1;AN=184;BQB=0.862349;DP=2788;DP4=1400,1311,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0344333;MQB=0.802513;MQSB=3.57713e-18;RPB=0.997582;SGB=66.8296;VDB=0.0899844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.7:1016284 chr07:001016284 0 W/1016284-1016284 FN3286-S SNP T -> C AC=1;AN=184;BQB=0.76925;DP=2844;DP4=1488,1246,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0648e-10;MQSB=0.97592;RPB=0.524419;SGB=33.3622;VDB=0.393952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K679E|753|LOC_Os07g02780|protein_coding|CODING|LOC_Os07g02780.1|10|1) FN2539-S.SNP.7:1031791 chr07:001031791 0 W/1031791-1031791 FN2539-S SNP A -> C AC=2;AN=198;BQB=0.981911;DP=4328;DP4=2024,2097,19,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.39002e-19;MQSB=0.999637;RPB=0.244008;SGB=122.837;VDB=0.129159;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.7:1041321 chr07:001041321 0 W/1041321-1041321 FN-241 Single Base Substitution G-A INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN409-S.SNP.7:1049830 chr07:001049830 0 W/1049830-1049830 FN409-S Single Base Substitution C-T INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1254-S.SNP.7:1050014 chr07:001050014 0 W/1050014-1050014 FN1254-S Single Base Substitution A-G INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN2756-S.SNP.7:1051848 chr07:001051848 0 W/1051848-1051848 FN2756-S SNP T -> C AC=1;AN=200;BQB=0.823385;DP=5149;DP4=2488,2406,14,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=7.3937e-13;MQSB=7.3345e-06;RPB=0.609709;SGB=50.3263;VDB=0.956501;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.7:1054532 chr07:001054532 0 W/1054532-1054532 FN3531-S SNP C -> T AC=2;AN=188;BQB=0.423371;DP=2748;DP4=1471,1182,8,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.94574e-10;MQSB=0.985385;RPB=0.821346;SGB=38.7926;VDB=0.675311;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.7:1058860 chr07:001058860 0 W/1058860-1058860 FN763-S Single Base Substitution G-C INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-312.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN-312 Single Base Substitution A-G INTERGENIC HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1048-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN1048-S Single Base Substitution A-G INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1204-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN1204-S Single Base Substitution A-G INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1297-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN1297-S Single Base Substitution A-G INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1566-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN1566-S Single Base Substitution A-G INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2223-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN2223-S SNP A -> G AC=1;AN=190;BQB=0.212603;DP=4393;DP4=1796,1883,19,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66399e-11;MQSB=0.916449;RPB=0.348107;SGB=-230.759;VDB=0.444185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN2449 SNP A -> G AC=2;AN=200;BQB=0.656785;DP=4447;DP4=1814,2025,15,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.09237e-19;MQSB=0.955557;RPB=0.700034;SGB=-46.3708;VDB=0.703419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN3358-S SNP A -> G AC=2;AN=184;BQB=0.861031;DP=2957;DP4=1201,1533,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.35305e-18;MQSB=0.762319;RPB=0.159301;SGB=29.6292;VDB=0.168421;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN3613-S SNP A -> G AC=1;AN=190;BQB=0.924861;DP=2841;DP4=1225,1401,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87364e-14;MQSB=0.986892;RPB=0.392907;SGB=44.0907;VDB=0.587417;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN369-S Single Base Substitution A-G INTERGENIC HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3806-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN3806-S SNP A -> G AC=2;AN=190;BQB=0.640389;DP=2699;DP4=1084,1454,6,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.38266e-10;MQSB=0.987412;RPB=0.541281;SGB=71.6393;VDB=0.563794;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN3955-S SNP A -> G AC=2;AN=168;BQB=0.986743;DP=2631;DP4=1104,1336,11,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.01159e-14;MQSB=0.997154;RPB=0.955916;SGB=123.066;VDB=0.739031;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN469-S Single Base Substitution A-G INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN477-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN477-S Single Base Substitution A-G INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN780-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN780-S Single Base Substitution A-G INTERGENIC HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN853-S Single Base Substitution A-G INTERGENIC HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 FN908-S Single Base Substitution A-G INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. W385-6-8-4.SNP.7:1065828 chr07:001065828 0 W/1065828-1065828 W385-6-8-4 Single Base Substitution A-G INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN987-S.SNP.7:1079060 chr07:001079060 0 W/1079060-1079060 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN3665-S.SNP.7:1097515 chr07:001097515 0 W/1097515-1097515 FN3665-S SNP C -> A AC=2;AN=190;BQB=0.88947;DP=3096;DP4=1487,1454,32,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.67161e-32;MQSB=0.993888;RPB=0.93946;SGB=266.691;VDB=0.952132;EFF=INTRON(MODIFIER||||557|LOC_Os07g02950|protein_coding|CODING|LOC_Os07g02950.1|8|1) W463-2-1.SNP.7:1097667 chr07:001097667 0 W/1097667-1097667 W463-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2446.SNP.7:1099029 chr07:001099029 0 W/1099029-1099029 FN2446 SNP T -> C AC=1;AN=200;BQB=0.754765;DP=4959;DP4=2282,2314,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.60655e-10;MQSB=0.889772;RPB=0.536734;SGB=29.4849;VDB=0.588507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D242G|557|LOC_Os07g02950|protein_coding|CODING|LOC_Os07g02950.1|6|1) FN3056-S.SNP.7:1100569 chr07:001100569 0 W/1100569-1100569 FN3056-S SNP C -> T AC=2;AN=184;BQB=0.979624;DP=2688;DP4=1335,1241,19,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06203e-20;MQSB=0.999867;RPB=0.926135;SGB=31.1509;VDB=0.290551;EFF=INTRON(MODIFIER||||557|LOC_Os07g02950|protein_coding|CODING|LOC_Os07g02950.1|3|1) FN569-S.SNP.7:1107296 chr07:001107296 0 W/1107296-1107296 FN569-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g02970 expressed protein SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN2324.SNP.7:1110936 chr07:001110936 0 W/1110936-1110936 FN2324 SNP C -> A AC=2;AN=192;BQB=0.881519;DP=4508;DP4=2328,1873,29,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.94909e-29;MQSB=0.965376;RPB=0.981306;SGB=68.3644;VDB=0.375127;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S146|507|LOC_Os07g02980|protein_coding|CODING|LOC_Os07g02980.1|1|1) FN3720-S.SNP.7:1115545 chr07:001115545 0 W/1115545-1115545 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.929764;DP=2847;DP4=1415,1325,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000363043;MQSB=0.652835;RPB=0.97764;SGB=25.439;VDB=0.083721;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P403|510|LOC_Os07g02990|protein_coding|CODING|LOC_Os07g02990.1|1|1) FN836-S.SNP.7:1123505 chr07:001123505 0 W/1123505-1123505 FN836-S Single Base Substitution A-G INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W22-2-1.SNP.7:1124243 chr07:001124243 0 W/1124243-1124243 W22-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3783-S.SNP.7:1128781 chr07:001128781 0 W/1128781-1128781 FN3783-S SNP G -> A AC=1;AN=190;BQB=0.972242;DP=3795;DP4=1949,1589,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.159824;MQSB=0.175334;RPB=0.376258;SGB=53.6492;VDB=0.172156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.7:1129371 chr07:001129371 0 W/1129371-1129371 FN1517-S Single Base Substitution A-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1476-S.SNP.7:1137712 chr07:001137712 0 W/1137712-1137712 FN1476-S Single Base Substitution T-C INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1677-S.SNP.7:1139147 chr07:001139147 0 W/1139147-1139147 FN1677-S SNP G -> A AC=1;AN=188;BQB=0.129852;DP=2508;DP4=1053,1423,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.860644;MQSB=0.234515;RPB=0.956631;SGB=-54.619;VDB=0.621001;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.7:1145399 chr07:001145399 0 W/1145399-1145399 FN654-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3926-S.SNP.7:1145843 chr07:001145843 0 W/1145843-1145843 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.848409;DP=2713;DP4=1453,1133,9,17;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0;MQB=3.20042e-11;MQSB=2.14501e-14;RPB=0.647808;SGB=77.8763;VDB=0.533053;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.7:1147953 chr07:001147953 0 W/1147953-1147953 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN3056-S.SNP.7:1149784 chr07:001149784 0 W/1149784-1149784 FN3056-S SNP T -> C AC=2;AN=184;BQB=0.980693;DP=3108;DP4=1750,1272,15,10;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=9.80466e-12;MQSB=0.99345;RPB=0.982401;SGB=107.526;VDB=0.413912;EFF=UTR_5_PRIME(MODIFIER||682||922|LOC_Os07g03040|protein_coding|CODING|LOC_Os07g03040.2|1|1),UTR_5_PRIME(MODIFIER||682||414|LOC_Os07g03040|protein_coding|CODING|LOC_Os07g03040.3|1|1),INTRON(MODIFIER||||922|LOC_Os07g03040|protein_coding|CODING|LOC_Os07g03040.1|1|1) FN591-S.SNP.7:1157130 chr07:001157130 0 W/1157130-1157130 FN591-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os07g03050 expressed protein SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN1554-S.SNP.7:1158170 chr07:001158170 0 W/1158170-1158170 FN1554-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3452-S.SNP.7:1160925 chr07:001160925 0 W/1160925-1160925 FN3452-S SNP G -> A AC=2;AN=184;BQB=0.324775;DP=2842;DP4=1559,1219,13,9;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.55402e-08;MQSB=0.000239143;RPB=0.886555;SGB=67.4439;VDB=0.535427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M35I|513|LOC_Os07g03060|protein_coding|CODING|LOC_Os07g03060.1|2|1) FN-258.SNP.7:1170429 chr07:001170429 0 W/1170429-1170429 FN-258 Single Base Substitution C-T INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1382-S.SNP.7:1174762 chr07:001174762 0 W/1174762-1174762 FN1382-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2379.SNP.7:1181838 chr07:001181838 0 W/1181838-1181838 FN2379 SNP G -> T AC=1;AN=192;BQB=0.986372;DP=4860;DP4=2399,2252,24,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.14956e-26;MQSB=0.881228;RPB=0.705495;SGB=98.1513;VDB=0.285866;EFF=UTR_3_PRIME(MODIFIER||386||386|LOC_Os07g03100|protein_coding|CODING|LOC_Os07g03100.1|1|1),INTRON(MODIFIER||||368|LOC_Os07g03100|protein_coding|CODING|LOC_Os07g03100.3|1|1),INTRON(MODIFIER||||370|LOC_Os07g03100|protein_coding|CODING|LOC_Os07g03100.2|1|1) FN2638-S.SNP.7:1189835 chr07:001189835 0 W/1189835-1189835 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.795812;DP=4980;DP4=2646,2168,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24389e-12;MQSB=0.930479;RPB=0.348464;SGB=81.8956;VDB=0.0964923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.7:1207407 chr07:001207407 0 W/1207407-1207407 FN2494 SNP C -> A AC=1;AN=200;BQB=0.860277;DP=4825;DP4=2350,2162,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16544e-15;MQSB=0.992898;RPB=0.524653;SGB=47.7211;VDB=0.238872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.7:1207409 chr07:001207409 0 W/1207409-1207409 FN2494 SNP T -> A AC=1;AN=200;BQB=0.844643;DP=4820;DP4=2366,2177,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.73096e-15;MQSB=0.978098;RPB=0.378946;SGB=100.316;VDB=0.378637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.7:1210697 chr07:001210697 0 W/1210697-1210697 FN2628-S SNP A -> G AC=1;AN=200;BQB=0.536135;DP=5062;DP4=2409,2402,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.16731e-11;MQSB=0.764936;RPB=0.938749;SGB=65.5058;VDB=0.522923;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.7:1216803 chr07:001216803 0 W/1216803-1216803 FN984-S Single Base Substitution A-T INTRON HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN4112-S.SNP.7:1225708 chr07:001225708 0 W/1225708-1225708 FN4112-S SNP G -> A AC=2;AN=182;BQB=0.999298;DP=3300;DP4=1803,1380,13,15;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00212121;MQB=8.33811e-11;MQSB=0.0922967;RPB=0.535533;SGB=88.2906;VDB=0.320175;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.7:1233290 chr07:001233290 0 W/1233290-1233290 FN-181 Single Base Substitution T-C INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN4139-S.SNP.7:1248260 chr07:001248260 0 W/1248260-1248260 FN4139-S SNP T -> A AC=1;AN=170;BQB=0.469351;DP=2466;DP4=1201,1180,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.92525e-07;MQSB=0.840336;RPB=0.973887;SGB=74.528;VDB=0.626321;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.7:1250355 chr07:001250355 0 W/1250355-1250355 FN3925-S SNP C -> T AC=1;AN=158;BQB=0.994203;DP=2541;DP4=1263,1147,16,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.80309e-14;MQSB=0.168964;RPB=0.975739;SGB=54.6215;VDB=0.151585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.7:1250835 chr07:001250835 0 W/1250835-1250835 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.734392;DP=5113;DP4=2277,2563,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.70691e-11;MQSB=0.999998;RPB=0.954163;SGB=51.0851;VDB=0.0319526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.7:1252541 chr07:001252541 0 W/1252541-1252541 FN2453 SNP A -> G AC=1;AN=200;BQB=0.937844;DP=5058;DP4=2534,2133,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18864e-08;MQSB=0.946606;RPB=0.99985;SGB=24.2746;VDB=0.91555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1216-S.SNP.7:1256703 chr07:001256703 0 W/1256703-1256703 FN1216-S Single Base Substitution G-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN3877-S.SNP.7:1272749 chr07:001272749 0 W/1272749-1272749 FN3877-S SNP T -> A AC=1;AN=158;BQB=0.999231;DP=2262;DP4=1060,1117,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0123784;MQB=4.50389e-06;MQSB=0.62943;RPB=0.921934;SGB=86.3921;VDB=0.996008;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.7:1278230 chr07:001278230 0 W/1278230-1278230 W42-1-3S-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g03230 eukaryotic translation initiation factor 3 subunit C, putative, expressed SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN989-S.SNP.7:1286350 chr07:001286350 0 W/1286350-1286350 FN989-S Single Base Substitution A-G INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3653-S.SNP.7:1291202 chr07:001291202 0 W/1291202-1291202 FN3653-S SNP T -> C AC=1;AN=190;BQB=0.990593;DP=2842;DP4=1421,1320,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.91919e-09;MQSB=0.892735;RPB=0.974088;SGB=26.2136;VDB=0.257102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.7:1303607 chr07:001303607 0 W/1303607-1303607 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.999999;DP=3916;DP4=1809,1719,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.09261e-09;MQSB=0.960189;RPB=0.89883;SGB=14.4113;VDB=0.563185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M230K|314|LOC_Os07g03250|protein_coding|CODING|LOC_Os07g03250.1|6|1) FN3848-S.SNP.7:1305523 chr07:001305523 0 W/1305523-1305523 FN3848-S SNP T -> C AC=2;AN=158;BQB=0.999817;DP=2449;DP4=1243,1023,18,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.65966e-18;MQSB=0.963927;RPB=0.98971;SGB=26.7362;VDB=0.924902;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q622|686|LOC_Os07g03260|protein_coding|CODING|LOC_Os07g03260.1|5|1) FN500-S.SNP.7:1306469 chr07:001306469 0 W/1306469-1306469 FN500-S Single Base Substitution G-A INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-387.SNP.7:1306980 chr07:001306980 0 W/1306980-1306980 FN-387 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g03260 CSLC10 - cellulose synthase-like family C, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2662-S.SNP.7:1310014 chr07:001310014 0 W/1310014-1310014 FN2662-S SNP C -> A AC=1;AN=200;BQB=0.917411;DP=4674;DP4=2318,2124,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.1534e-08;MQSB=0.992431;RPB=0.96246;SGB=3.06925;VDB=0.2043;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.7:1315289 chr07:001315289 0 W/1315289-1315289 FN2305 SNP A -> T AC=1;AN=192;BQB=0.999864;DP=5026;DP4=2387,2409,15,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.3082e-17;MQSB=0.996553;RPB=0.690902;SGB=64.8148;VDB=0.0249445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y134N|237|LOC_Os07g03270|protein_coding|CODING|LOC_Os07g03270.1|4|1) FN-215.SNP.7:1317113 chr07:001317113 0 W/1317113-1317113 FN-215 Single Base Substitution G-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN2423.SNP.7:1417608 chr07:001417608 0 W/1417608-1417608 FN2423 SNP T -> A AC=2;AN=200;BQB=0.98546;DP=4341;DP4=2085,1880,18,23;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0363971;MQB=0.999893;MQSB=4.64852e-14;RPB=0.263359;SGB=137.609;VDB=0.538862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.7:1427692 chr07:001427692 0 W/1427692-1427692 FN1614-S Single Base Substitution T-A INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3725-S.SNP.7:1429269 chr07:001429269 0 W/1429269-1429269 FN3725-S SNP G -> C AC=1;AN=190;BQB=0.957066;DP=2222;DP4=894,1207,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.273627;MQB=0.190498;MQSB=9.4562e-09;RPB=0.574373;SGB=36.1006;VDB=0.456033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.7:1430010 chr07:001430010 0 W/1430010-1430010 FN2449 SNP G -> A AC=1;AN=200;BQB=0.908893;DP=3570;DP4=1926,1405,6,5;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0291317;MQB=0.342581;MQSB=0.00591847;RPB=0.638854;SGB=45.0543;VDB=0.623847;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.7:1430024 chr07:001430024 0 W/1430024-1430024 FN3789-S SNP G -> A AC=1;AN=190;BQB=0.76213;DP=2659;DP4=1351,1231,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0188041;MQB=0.08683;MQSB=0.000392485;RPB=0.802362;SGB=39.9877;VDB=0.94951;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.7:1430817 chr07:001430817 0 W/1430817-1430817 FN3311-S SNP C -> A AC=1;AN=184;BQB=0.568167;DP=3445;DP4=1332,1935,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0626996;MQB=0.971354;MQSB=0.00450891;RPB=0.667908;SGB=89.4385;VDB=0.971785;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN-298 Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1701-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN1701-S SNP G -> C AC=2;AN=188;BQB=0.00316905;DP=3429;DP4=2374,1017,23,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.19145e-11;MQSB=7.17686e-05;RPB=0.909428;SGB=-41.9316;VDB=0.717988;EFF=UTR_3_PRIME(MODIFIER||92||169|LOC_Os07g03590|protein_coding|CODING|LOC_Os07g03590.1|1|1) FN2611-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN2611-S SNP G -> C AC=1;AN=200;BQB=0.955763;DP=5327;DP4=2605,2405,29,35;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.42729e-33;MQSB=0.00271544;RPB=0.644757;SGB=220.528;VDB=0.805366;EFF=UTR_3_PRIME(MODIFIER||92||169|LOC_Os07g03590|protein_coding|CODING|LOC_Os07g03590.1|1|1) FN3838-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN3838-S SNP G -> C AC=2;AN=190;BQB=0.860035;DP=2923;DP4=1285,1512,9,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.55306e-14;MQSB=0.000266998;RPB=0.809154;SGB=96.5165;VDB=0.353508;EFF=UTR_3_PRIME(MODIFIER||92||169|LOC_Os07g03590|protein_coding|CODING|LOC_Os07g03590.1|1|1) FN3859-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN3859-S SNP G -> C AC=2;AN=158;BQB=0.980008;DP=2528;DP4=1158,1256,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.682e-11;MQSB=0.000134959;RPB=0.433789;SGB=90.7616;VDB=0.0630586;EFF=UTR_3_PRIME(MODIFIER||92||169|LOC_Os07g03590|protein_coding|CODING|LOC_Os07g03590.1|1|1) FN4221-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN4221-S SNP G -> C AC=1;AN=170;BQB=0.873026;DP=2167;DP4=883,1230,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000118863;MQSB=0.0011125;RPB=0.227312;SGB=17.6652;VDB=0.49048;EFF=UTR_3_PRIME(MODIFIER||92||169|LOC_Os07g03590|protein_coding|CODING|LOC_Os07g03590.1|1|1) FN484-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN484-S Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN767-S.SNP.7:1437986 chr07:001437986 0 W/1437986-1437986 FN767-S Single Base Substitution G-C UTR_3_PRIME HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN3853-S.SNP.7:1439544 chr07:001439544 0 W/1439544-1439544 FN3853-S SNP C -> G AC=1;AN=158;BQB=0.822645;DP=2276;DP4=1070,1112,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.1411e-07;MQSB=0.830279;RPB=0.910528;SGB=42.6978;VDB=0.231253;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.7:1445595 chr07:001445595 0 W/1445595-1445595 FN695-S Single Base Substitution A-G INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2140-S.SNP.7:1447994 chr07:001447994 0 W/1447994-1447994 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.88059;DP=3451;DP4=1257,2157,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.51383e-08;MQSB=0.98512;RPB=0.831536;SGB=4.1907;VDB=0.146644;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.7:1450944 chr07:001450944 0 W/1450944-1450944 FN1122-S Single Base Substitution C-T INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2673-S.SNP.7:1458235 chr07:001458235 0 W/1458235-1458235 FN2673-S SNP C -> T AC=2;AN=200;BQB=0.892994;DP=4882;DP4=2492,2107,30,39;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.80553e-26;MQSB=0.928234;RPB=0.980634;SGB=228.367;VDB=0.551694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.7:1458484 chr07:001458484 0 W/1458484-1458484 FN2307 SNP G -> A AC=1;AN=192;BQB=0.835746;DP=4949;DP4=2487,2039,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0258638;MQB=0.0738882;MQSB=2.64573e-06;RPB=0.691757;SGB=72.0322;VDB=0.507603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.7:1462646 chr07:001462646 0 W/1462646-1462646 FN3432-S SNP G -> C AC=1;AN=184;BQB=0.944002;DP=3826;DP4=1700,2013,11,17;HOB=5.90737e-05;ICB=0.00011879;MQ=12;MQ0F=0.523785;MQB=0.395955;MQSB=0.372605;RPB=0.613487;SGB=23.542;VDB=0.890298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M439I|1781|LOC_Os07g03630|protein_coding|CODING|LOC_Os07g03630.1|2|1) FN3057-S.SNP.7:1463606 chr07:001463606 0 W/1463606-1463606 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.731348;DP=3249;DP4=1503,1634,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=17;MQ0F=0.348107;MQB=0.954752;MQSB=7.31404e-07;RPB=0.9703;SGB=49.835;VDB=0.640627;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S759|1781|LOC_Os07g03630|protein_coding|CODING|LOC_Os07g03630.1|2|1) FN988-S.SNP.7:1482243 chr07:001482243 0 W/1482243-1482243 FN988-S Single Base Substitution T-G INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN560-S.SNP.7:1516284 chr07:001516284 0 W/1516284-1516284 FN560-S Single Base Substitution T-G INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3485-S.SNP.7:1527708 chr07:001527708 0 W/1527708-1527708 FN3485-S SNP G -> T AC=2;AN=184;BQB=0.403403;DP=3421;DP4=1726,1599,10,22;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.000876937;MQB=1.144e-12;MQSB=0.386704;RPB=0.996453;SGB=139.178;VDB=0.904513;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.7:1527709 chr07:001527709 0 W/1527709-1527709 FN3485-S SNP T -> A AC=2;AN=184;BQB=0.986937;DP=3429;DP4=1482,1576,11,23;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.000874891;MQB=5.93811e-12;MQSB=0.146298;RPB=0.861565;SGB=71.1891;VDB=0.842107;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.7:1528106 chr07:001528106 0 W/1528106-1528106 FN778-S Single Base Substitution A-G INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3678-S.SNP.7:1529999 chr07:001529999 0 W/1529999-1529999 FN3678-S SNP G -> T AC=1;AN=190;BQB=0.932616;DP=2641;DP4=1348,1205,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30487e-05;MQSB=0.927499;RPB=0.561356;SGB=30.8803;VDB=0.657519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V32L|365|LOC_Os07g03740|protein_coding|CODING|LOC_Os07g03740.1|1|1) FN1761-S.SNP.7:1533594 chr07:001533594 0 W/1533594-1533594 FN1761-S SNP C -> T AC=1;AN=188;BQB=0.0404849;DP=2915;DP4=1827,1057,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.60004e-05;MQSB=0.858685;RPB=0.769777;SGB=-15.5431;VDB=0.898922;EFF=INTRON(MODIFIER||||365|LOC_Os07g03740|protein_coding|CODING|LOC_Os07g03740.1|4|1) FN1136-S.SNP.7:1538238 chr07:001538238 0 W/1538238-1538238 FN1136-S Single Base Substitution G-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1635-S.SNP.7:1542844 chr07:001542844 0 W/1542844-1542844 FN1635-S SNP A -> C AC=1;AN=188;BQB=0.0988375;DP=3450;DP4=1474,1941,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.80335e-09;MQSB=0.988593;RPB=0.56606;SGB=-12.2833;VDB=0.68083;EFF=INTRON(MODIFIER||||368|LOC_Os07g03760|protein_coding|CODING|LOC_Os07g03760.1|3|1) FN2177-S.SNP.7:1543994 chr07:001543994 0 W/1543994-1543994 FN2177-S SNP G -> A AC=1;AN=168;BQB=0.000809247;DP=3019;DP4=2054,871,22,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00131478;MQSB=0.187089;RPB=0.004376;SGB=-262.894;VDB=0.13821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.7:1546949 chr07:001546949 0 W/1546949-1546949 FN1531-S Single Base Substitution T-C INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2285.SNP.7:1546949 chr07:001546949 0 W/1546949-1546949 FN2285 SNP T -> C AC=2;AN=192;BQB=0.174644;DP=5036;DP4=2535,2259,25,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.80507e-25;MQSB=0.596993;RPB=0.80612;SGB=153.839;VDB=0.406118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.7:1546949 chr07:001546949 0 W/1546949-1546949 FN3399-S SNP T -> C AC=2;AN=184;BQB=0.98446;DP=2814;DP4=1459,1251,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.70083e-15;MQSB=0.985295;RPB=0.99299;SGB=112.047;VDB=0.924865;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.7:1552529 chr07:001552529 0 W/1552529-1552529 FN-301 Single Base Substitution C-T INTERGENIC HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2598-S.SNP.7:1553988 chr07:001553988 0 W/1553988-1553988 FN2598-S SNP A -> G AC=2;AN=198;BQB=0.409198;DP=4190;DP4=1989,1982,19,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.53021e-23;MQSB=0.993381;RPB=0.981485;SGB=122.837;VDB=0.354358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3822-S.SNP.7:1558076 chr07:001558076 0 W/1558076-1558076 FN3822-S SNP C -> A AC=1;AN=190;BQB=0.854599;DP=2473;DP4=1252,1127,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000404367;MQB=8.75125e-07;MQSB=0.993163;RPB=0.748842;SGB=39.6545;VDB=0.746499;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.7:1558613 chr07:001558613 0 W/1558613-1558613 FN928-S Single Base Substitution G-A INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. W598-2-1.SNP.7:1558613 chr07:001558613 0 W/1558613-1558613 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2421.SNP.7:1562877 chr07:001562877 0 W/1562877-1562877 FN2421 SNP G -> A AC=1;AN=200;BQB=0.953103;DP=5130;DP4=2578,2268,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.71341e-08;MQSB=0.720639;RPB=0.886896;SGB=33.0593;VDB=0.0076747;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.7:1563266 chr07:001563266 0 W/1563266-1563266 FN3536-S SNP C -> A AC=1;AN=188;BQB=0.622338;DP=2471;DP4=1216,1199,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38134e-05;MQSB=0.974781;RPB=0.905324;SGB=25.3545;VDB=0.675225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:1565413 chr07:001565413 0 W/1565413-1565413 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.359856;DP=4681;DP4=2415,1825,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.64948e-14;MQSB=0.987091;RPB=0.357321;SGB=55.2955;VDB=0.416352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.7:1588298 chr07:001588298 0 W/1588298-1588298 FN-151 Single Base Substitution A-C INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2449.SNP.7:1589324 chr07:001589324 0 W/1589324-1589324 FN2449 SNP C -> T AC=1;AN=200;BQB=0.986992;DP=4604;DP4=2369,2036,9,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.15685e-05;MQSB=0.0734188;RPB=0.719001;SGB=81.8956;VDB=0.562221;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.7:1595385 chr07:001595385 0 W/1595385-1595385 FN518-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN3592-S.SNP.7:1596455 chr07:001596455 0 W/1596455-1596455 FN3592-S SNP A -> G AC=2;AN=188;BQB=0.857391;DP=3413;DP4=2009,1265,25,17;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=5.82869e-16;MQSB=0.976603;RPB=0.999758;SGB=138.74;VDB=0.599818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V387A|698|LOC_Os07g03820|protein_coding|CODING|LOC_Os07g03820.1|1|1) FN4247-S.SNP.7:1596492 chr07:001596492 0 W/1596492-1596492 FN4247-S SNP T -> A AC=1;AN=170;BQB=0.991149;DP=2816;DP4=1533,1216,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=1.02311e-06;MQSB=0.0108547;RPB=0.335149;SGB=52.3148;VDB=0.960145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S375C|698|LOC_Os07g03820|protein_coding|CODING|LOC_Os07g03820.1|1|1) FN3492-S.SNP.7:1599854 chr07:001599854 0 W/1599854-1599854 FN3492-S SNP A -> T AC=1;AN=184;BQB=0.726105;DP=2812;DP4=1316,1396,15,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000355619;MQB=4.27015e-12;MQSB=0.990513;RPB=0.804865;SGB=12.8895;VDB=0.905241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.7:1599876 chr07:001599876 0 W/1599876-1599876 FN2670-S SNP T -> C AC=1;AN=200;BQB=0.87448;DP=5123;DP4=2474,2373,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0111e-14;MQSB=0.928095;RPB=0.156386;SGB=52.9314;VDB=0.161206;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G670|671|LOC_Os07g03830|protein_coding|CODING|LOC_Os07g03830.1|1|1) FN3715-S.SNP.7:1602539 chr07:001602539 0 W/1602539-1602539 FN3715-S SNP C -> T AC=1;AN=190;BQB=0.704997;DP=3176;DP4=1488,1565,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06746e-05;MQSB=0.970417;RPB=0.854622;SGB=10.8904;VDB=0.154586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.7:1606203 chr07:001606203 0 W/1606203-1606203 FN3503-S SNP C -> T AC=1;AN=188;BQB=0.890766;DP=2991;DP4=1616,1263,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.88363e-09;MQSB=0.588803;RPB=0.877448;SGB=62.6088;VDB=0.517146;EFF=UTR_5_PRIME(MODIFIER||92||147|LOC_Os07g03849|protein_coding|CODING|LOC_Os07g03849.1|1|1) FN756-S.SNP.7:1627707 chr07:001627707 0 W/1627707-1627707 FN756-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g03890 lectin-like receptor kinase 7, putative, expressed SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2639-S.SNP.7:1632572 chr07:001632572 0 W/1632572-1632572 FN2639-S SNP A -> T AC=2;AN=200;BQB=0.985338;DP=4925;DP4=2328,2305,47,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.57364e-40;MQSB=0.332919;RPB=0.749021;SGB=165.809;VDB=0.05407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S228T|676|LOC_Os07g03900|protein_coding|CODING|LOC_Os07g03900.1|1|1) FN1411-S.SNP.7:1638521 chr07:001638521 0 W/1638521-1638521 FN1411-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN_812-4-1.SNP.7:1693401 chr07:001693401 0 W/1693401-1693401 FN_812-4-1 Single Base Substitution G-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN_812-4-1.SNP.7:1693402 chr07:001693402 0 W/1693402-1693402 FN_812-4-1 Single Base Substitution C-A HET LOC_Os07g04010 lectin-like receptor kinase, putative, expressed SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN910-S.SNP.7:1694018 chr07:001694018 0 W/1694018-1694018 FN910-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g04010 lectin-like receptor kinase, putative, expressed SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN669-S.SNP.7:1701214 chr07:001701214 0 W/1701214-1701214 FN669-S Single Base Substitution A-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3280-S.SNP.7:1786001 chr07:001786001 0 W/1786001-1786001 FN3280-S SNP C -> G AC=1;AN=184;BQB=0.98885;DP=2960;DP4=1519,1340,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22669e-09;MQSB=0.967429;RPB=0.816021;SGB=42.7914;VDB=0.48571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.7:1803539 chr07:001803539 0 W/1803539-1803539 FN2203-S SNP G -> A AC=1;AN=190;BQB=0.996152;DP=5043;DP4=2321,2430,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.33266e-07;MQSB=2.46599e-19;RPB=0.9876;SGB=28.7675;VDB=0.845711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.7:1807615 chr07:001807615 0 W/1807615-1807615 FN2263-S SNP T -> C AC=1;AN=190;BQB=0.335206;DP=5196;DP4=2360,2527,16,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000192456;MQB=2.33766e-09;MQSB=0.996192;RPB=0.337745;SGB=80.9724;VDB=0.485585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.7:1810291 chr07:001810291 0 W/1810291-1810291 FN3930-S SNP T -> C AC=1;AN=158;BQB=0.995696;DP=2520;DP4=1100,1308,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.9383e-09;MQSB=0.999675;RPB=0.558855;SGB=28.5576;VDB=0.0321253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.7:1810383 chr07:001810383 0 W/1810383-1810383 FN1623-S Single Base Substitution G-T INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3540-S.SNP.7:1812890 chr07:001812890 0 W/1812890-1812890 FN3540-S SNP T -> C AC=1;AN=188;BQB=0.925606;DP=2522;DP4=1269,1156,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.49146e-05;MQSB=0.995336;RPB=0.999956;SGB=30.8063;VDB=0.0132287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K975R|1023|LOC_Os07g04190|protein_coding|CODING|LOC_Os07g04190.1|2|1) FN-411.SNP.7:1822603 chr07:001822603 0 W/1822603-1822603 FN-411 Single Base Substitution T-C INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1079-S.SNP.7:1832126 chr07:001832126 0 W/1832126-1832126 FN1079-S Single Base Substitution G-A INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3576-S.SNP.7:1834608 chr07:001834608 0 W/1834608-1834608 FN3576-S SNP T -> C AC=2;AN=188;BQB=0.948459;DP=2567;DP4=1187,1227,5,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.51621e-09;MQSB=0.965399;RPB=0.971095;SGB=67.1521;VDB=0.928906;EFF=INTRON(MODIFIER||||285|LOC_Os07g04200|protein_coding|CODING|LOC_Os07g04200.1|4|1) FN1549-S.SNP.7:1835275 chr07:001835275 0 W/1835275-1835275 FN1549-S Single Base Substitution G-C INTRON HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3354-S.SNP.7:1839600 chr07:001839600 0 W/1839600-1839600 FN3354-S SNP T -> A AC=1;AN=184;BQB=0.93336;DP=2729;DP4=1376,1263,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.37091e-07;MQSB=0.74021;RPB=0.974683;SGB=44.2207;VDB=0.553773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.7:1845655 chr07:001845655 0 W/1845655-1845655 FN2740-S SNP A -> C AC=1;AN=200;BQB=0.747251;DP=4965;DP4=2379,2417,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.52154e-07;MQSB=0.953477;RPB=0.788981;SGB=49.6594;VDB=0.18819;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtC|V610|992|LOC_Os07g04210|protein_coding|CODING|LOC_Os07g04210.1|11|1) FN1583-S.SNP.7:1848320 chr07:001848320 0 W/1848320-1848320 FN1583-S Single Base Substitution C-T INTRON Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-257.SNP.7:1860528 chr07:001860528 0 W/1860528-1860528 FN-257 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g04230 mTERF domain containing protein, expressed SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2247-S.SNP.7:1862102 chr07:001862102 0 W/1862102-1862102 FN2247-S SNP C -> A AC=1;AN=190;BQB=0.307985;DP=5210;DP4=2388,2477,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94093e-09;MQSB=0.956537;RPB=0.549327;SGB=62.7569;VDB=0.222343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R513L|630|LOC_Os07g04240|protein_coding|CODING|LOC_Os07g04240.1|12|1) W706-3-1.SNP.7:1874048 chr07:001874048 0 W/1874048-1874048 W706-3-1 Single Base Substitution G-T INTRON HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN-174.SNP.7:1877606 chr07:001877606 0 W/1877606-1877606 FN-174 Single Base Substitution C-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1514-S.SNP.7:1885820 chr07:001885820 0 W/1885820-1885820 FN1514-S Single Base Substitution T-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4087-S.SNP.7:1891137 chr07:001891137 0 W/1891137-1891137 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.94031;DP=3036;DP4=1532,1442,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.94823e-07;MQSB=0.991705;RPB=0.999986;SGB=44.1115;VDB=0.48517;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y46|77|LOC_Os07g04270|protein_coding|CODING|LOC_Os07g04270.1|2|1) FN1546-S.SNP.7:1896977 chr07:001896977 0 W/1896977-1896977 FN1546-S Single Base Substitution G-C INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN-129.SNP.7:1906629 chr07:001906629 0 W/1906629-1906629 FN-129 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g04320 expressed protein SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2677-S.SNP.7:1907928 chr07:001907928 0 W/1907928-1907928 FN2677-S SNP C -> T AC=2;AN=200;BQB=0.999391;DP=5062;DP4=2335,2405,22,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.28583e-28;MQSB=0.904735;RPB=0.796671;SGB=107.64;VDB=0.863773;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.7:1914112 chr07:001914112 0 W/1914112-1914112 FN1094-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN242-S.SNP.7:1914112 chr07:001914112 0 W/1914112-1914112 FN242-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN723-S.SNP.7:1937764 chr07:001937764 0 W/1937764-1937764 FN723-S Single Base Substitution T-G INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1505-S.SNP.7:1939682 chr07:001939682 0 W/1939682-1939682 FN1505-S Single Base Substitution G-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN-108.SNP.7:1970075 chr07:001970075 0 W/1970075-1970075 FN-108 Single Base Substitution T-C INTRON HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-104.SNP.7:1972483 chr07:001972483 0 W/1972483-1972483 FN-104 Single Base Substitution G-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-104.SNP.7:1972484 chr07:001972484 0 W/1972484-1972484 FN-104 Single Base Substitution A-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3890-S.SNP.7:1973176 chr07:001973176 0 W/1973176-1973176 FN3890-S SNP G -> A AC=2;AN=158;BQB=0.967517;DP=2771;DP4=1135,1458,26,31;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.30334e-31;MQSB=0.996112;RPB=0.924703;SGB=172.629;VDB=0.630004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.7:1978566 chr07:001978566 0 W/1978566-1978566 FN1703-S SNP A -> G AC=1;AN=188;BQB=0.0744815;DP=4027;DP4=1864,2123,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.80803e-08;MQSB=0.999974;RPB=0.982625;SGB=-124.805;VDB=0.514384;EFF=INTRON(MODIFIER||||227|LOC_Os07g04480|protein_coding|CODING|LOC_Os07g04480.1|1|1) FN2330.SNP.7:1980547 chr07:001980547 0 W/1980547-1980547 FN2330 SNP A -> G AC=1;AN=192;BQB=0.704177;DP=4558;DP4=1966,2142,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0318122;MQB=0.0522802;MQSB=1.14087e-06;RPB=0.70518;SGB=16.0922;VDB=0.520686;EFF=UTR_5_PRIME(MODIFIER||1140||227|LOC_Os07g04480|protein_coding|CODING|LOC_Os07g04480.1|1|1) FN2572-S.SNP.7:1981646 chr07:001981646 0 W/1981646-1981646 FN2572-S SNP C -> G AC=1;AN=198;BQB=0.304033;DP=4582;DP4=2363,1942,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.109559;MQB=0.908519;MQSB=1.1346e-37;RPB=0.237165;SGB=90.9049;VDB=0.515563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.7:1982288 chr07:001982288 0 W/1982288-1982288 FN3530-S SNP G -> A AC=2;AN=188;BQB=0.429652;DP=4280;DP4=1991,2147,1,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000233645;MQB=1.90266e-08;MQSB=0.633917;RPB=0.747185;SGB=67.8739;VDB=0.757291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.7:1997271 chr07:001997271 0 W/1997271-1997271 FN2379 SNP G -> T AC=1;AN=192;BQB=0.910584;DP=4815;DP4=2042,2481,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207684;MQB=3.4861e-20;MQSB=0.999878;RPB=0.977696;SGB=67.3792;VDB=0.935984;EFF=INTRON(MODIFIER||||1739|LOC_Os07g04530|protein_coding|CODING|LOC_Os07g04530.1|1|1) FN2379.SNP.7:1997272 chr07:001997272 0 W/1997272-1997272 FN2379 SNP A -> T AC=1;AN=192;BQB=0.657707;DP=4822;DP4=1968,2443,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.65113e-20;MQSB=0.981811;RPB=0.805337;SGB=67.3792;VDB=0.874869;EFF=INTRON(MODIFIER||||1739|LOC_Os07g04530|protein_coding|CODING|LOC_Os07g04530.1|1|1) FN534-S.SNP.7:2009424 chr07:002009424 0 W/2009424-2009424 FN534-S Single Base Substitution G-A INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN534-S.SNP.7:2009425 chr07:002009425 0 W/2009425-2009425 FN534-S Single Base Substitution G-A INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN534-S.SNP.7:2009430 chr07:002009430 0 W/2009430-2009430 FN534-S Single Base Substitution G-A INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3951-S.SNP.7:2015875 chr07:002015875 0 W/2015875-2015875 FN3951-S SNP A -> T AC=1;AN=168;BQB=0.609;DP=2241;DP4=1050,1041,2,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12774e-05;MQSB=0.869159;RPB=0.673414;SGB=30.0193;VDB=0.353506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.7:2022207 chr07:002022207 0 W/2022207-2022207 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.994189;DP=4230;DP4=2112,1948,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.55763e-08;MQSB=0.643765;RPB=0.987534;SGB=36.5539;VDB=0.960145;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.7:2022858 chr07:002022858 0 W/2022858-2022858 FN941-S Single Base Substitution A-G INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1478-S.SNP.7:2024457 chr07:002024457 0 W/2024457-2024457 FN1478-S Single Base Substitution G-T INTRON HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN4176-S.SNP.7:2029381 chr07:002029381 0 W/2029381-2029381 FN4176-S SNP G -> T AC=1;AN=170;BQB=0.750071;DP=2538;DP4=1309,1167,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.09598e-06;MQSB=0.946407;RPB=0.109821;SGB=34.878;VDB=0.236092;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.7:2030721 chr07:002030721 0 W/2030721-2030721 FN3920-S SNP A -> G AC=1;AN=158;BQB=0.955887;DP=2421;DP4=1026,1260,6,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.26009e-09;MQSB=0.947793;RPB=0.956447;SGB=50.9207;VDB=0.120562;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.7:2036152 chr07:002036152 0 W/2036152-2036152 FN3854-S SNP C -> T AC=2;AN=158;BQB=0.994425;DP=2522;DP4=1096,1197,10,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000396511;MQB=3.6344e-07;MQSB=0.604878;RPB=0.81771;SGB=64.5449;VDB=0.965004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D187N|388|LOC_Os07g04580|protein_coding|CODING|LOC_Os07g04580.1|1|1) FN2755-S.SNP.7:2042434 chr07:002042434 0 W/2042434-2042434 FN2755-S SNP G -> T AC=2;AN=200;BQB=0.468211;DP=4769;DP4=2362,2093,28,18;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000629063;MQB=4.09365e-20;MQSB=0.000789461;RPB=0.85861;SGB=105.035;VDB=0.510518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.7:2044935 chr07:002044935 0 W/2044935-2044935 FN1375-S Single Base Substitution T-C INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN851-S.SNP.7:2045343 chr07:002045343 0 W/2045343-2045343 FN851-S Single Base Substitution T-A INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN819-S.SNP.7:2047802 chr07:002047802 0 W/2047802-2047802 FN819-S Single Base Substitution T-A INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN_543-2-6.SNP.7:2049958 chr07:002049958 0 W/2049958-2049958 FN_543-2-6 Single Base Substitution G-C Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1642-S.SNP.7:2050255 chr07:002050255 0 W/2050255-2050255 FN1642-S Single Base Substitution C-A INTERGENIC Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3398-S.SNP.7:2053681 chr07:002053681 0 W/2053681-2053681 FN3398-S SNP A -> G AC=1;AN=184;BQB=0.511847;DP=2328;DP4=901,1277,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.17002e-09;MQSB=0.985814;RPB=0.799077;SGB=5.28054;VDB=0.86985;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.7:2054911 chr07:002054911 0 W/2054911-2054911 FN760-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g04630 expressed protein SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1488-S.SNP.7:2058107 chr07:002058107 0 W/2058107-2058107 FN1488-S Single Base Substitution G-T INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1297-S.SNP.7:2059855 chr07:002059855 0 W/2059855-2059855 FN1297-S Single Base Substitution C-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1722-S.SNP.7:2069121 chr07:002069121 0 W/2069121-2069121 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.436153;DP=2796;DP4=932,1817,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28114e-07;MQSB=0.381009;RPB=0.851997;SGB=-38.278;VDB=0.106846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.7:2074509 chr07:002074509 0 W/2074509-2074509 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.902897;DP=4749;DP4=2237,2273,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.074e-08;MQSB=0.999992;RPB=0.115951;SGB=19.0642;VDB=0.388723;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.7:2076867 chr07:002076867 0 W/2076867-2076867 FN4147-S SNP T -> A AC=1;AN=170;BQB=0.777335;DP=2608;DP4=1186,1344,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.80809e-07;MQSB=0.887527;RPB=0.893219;SGB=61.2001;VDB=0.663763;EFF=INTERGENIC(MODIFIER||||||||||1) FN468-S.SNP.7:2078344 chr07:002078344 0 W/2078344-2078344 FN468-S Single Base Substitution G-A INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2403.SNP.7:2078346 chr07:002078346 0 W/2078346-2078346 FN2403 SNP G -> T AC=1;AN=200;BQB=0.994504;DP=4865;DP4=2285,2334,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67488e-09;MQSB=0.995984;RPB=0.998785;SGB=47.4799;VDB=0.946589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.7:2078884 chr07:002078884 0 W/2078884-2078884 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.869056;DP=5058;DP4=2481,2342,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32988e-17;MQSB=0.966787;RPB=0.876119;SGB=87.1368;VDB=0.0649024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.7:2091783 chr07:002091783 0 W/2091783-2091783 FN1154-S Single Base Substitution A-G INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. W252-6-1.SNP.7:2096578 chr07:002096578 0 W/2096578-2096578 W252-6-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN-330.SNP.7:2096924 chr07:002096924 0 W/2096924-2096924 FN-330 Single Base Substitution G-A INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1136-19-S.SNP.7:2102163 chr07:002102163 0 W/2102163-2102163 FN1136-19-S Single Base Substitution C-G INTRON Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1728-S.SNP.7:2103556 chr07:002103556 0 W/2103556-2103556 FN1728-S SNP C -> G AC=1;AN=188;BQB=0.338495;DP=1420;DP4=1032,356,7,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000319724;MQSB=0.839239;RPB=0.0533746;SGB=30.8063;VDB=0.325119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K26N|695|LOC_Os07g04730|protein_coding|CODING|LOC_Os07g04730.1|1|1) FN471-S.SNP.7:2104503 chr07:002104503 0 W/2104503-2104503 FN471-S Single Base Substitution A-T INTERGENIC HOMO SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2345.SNP.7:2128487 chr07:002128487 0 W/2128487-2128487 FN2345 SNP C -> T AC=2;AN=192;BQB=0.979051;DP=4928;DP4=2432,2144,37,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.58805e-30;MQSB=0.856375;RPB=0.850535;SGB=74.6218;VDB=0.0591791;EFF=UTR_3_PRIME(MODIFIER||63||447|LOC_Os07g04810|protein_coding|CODING|LOC_Os07g04810.1|2|1),UTR_3_PRIME(MODIFIER||63||395|LOC_Os07g04810|protein_coding|CODING|LOC_Os07g04810.2|1|1) 703-4.SNP.7:2128961 chr07:002128961 0 W/2128961-2128961 703-4 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN-278.SNP.7:2164815 chr07:002164815 0 W/2164815-2164815 FN-278 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3470-S.SNP.7:2175257 chr07:002175257 0 W/2175257-2175257 FN3470-S SNP T -> C AC=1;AN=184;BQB=0.880552;DP=2772;DP4=1502,1128,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79003e-11;MQSB=0.999092;RPB=0.747042;SGB=67.4439;VDB=0.99424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.7:2181474 chr07:002181474 0 W/2181474-2181474 FN2249-S SNP C -> A AC=1;AN=190;BQB=0.939035;DP=4889;DP4=2198,2056,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204541;MQB=8.00765e-13;MQSB=0.692976;RPB=0.96352;SGB=-70.442;VDB=0.227379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2084-S.SNP.7:2183347 chr07:002183347 0 W/2183347-2183347 FN2084-S SNP G -> T AC=1;AN=168;BQB=0.0158824;DP=3748;DP4=1994,1705,12,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02006e-13;MQSB=0.983132;RPB=0.981917;SGB=-79.0524;VDB=0.505867;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.7:2185218 chr07:002185218 0 W/2185218-2185218 FN750-S Single Base Substitution G-C INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN-408.SNP.7:2185581 chr07:002185581 0 W/2185581-2185581 FN-408 Single Base Substitution G-A INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN-387.SNP.7:2195085 chr07:002195085 0 W/2195085-2195085 FN-387 Single Base Substitution G-A INTRON HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN4221-S.SNP.7:2201273 chr07:002201273 0 W/2201273-2201273 FN4221-S SNP T -> A AC=1;AN=170;BQB=0.938624;DP=2694;DP4=1060,1479,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.90346e-07;MQSB=0.0112439;RPB=0.753531;SGB=47.8722;VDB=0.194617;EFF=UTR_3_PRIME(MODIFIER||121||377|LOC_Os07g05000|protein_coding|CODING|LOC_Os07g05000.1|10|1) FN2676-S.SNP.7:2203479 chr07:002203479 0 W/2203479-2203479 FN2676-S SNP G -> T AC=1;AN=200;BQB=0.928124;DP=4773;DP4=2240,2182,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57245e-08;MQSB=0.947957;RPB=0.990033;SGB=54.2646;VDB=0.399768;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.7:2205640 chr07:002205640 0 W/2205640-2205640 FN937-S Single Base Substitution G-A INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN4164-S.SNP.7:2206362 chr07:002206362 0 W/2206362-2206362 FN4164-S SNP C -> T AC=1;AN=170;BQB=0.944224;DP=1951;DP4=1167,719,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.5089e-07;MQSB=0.825999;RPB=0.993011;SGB=38.987;VDB=0.195766;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.7:2206363 chr07:002206363 0 W/2206363-2206363 FN4164-S SNP C -> T AC=1;AN=170;BQB=0.748439;DP=1948;DP4=1175,716,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.79014e-06;MQSB=0.877043;RPB=0.938775;SGB=31.4354;VDB=0.36355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.7:2224822 chr07:002224822 0 W/2224822-2224822 FN3431-S SNP G -> T AC=1;AN=184;BQB=0.870866;DP=2683;DP4=1216,1372,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.67115e-07;MQSB=0.920184;RPB=0.628432;SGB=10.6662;VDB=0.987082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P32H|239|LOC_Os07g05040|protein_coding|CODING|LOC_Os07g05040.1|1|1) FN2334.SNP.7:2228075 chr07:002228075 0 W/2228075-2228075 FN2334 SNP T -> G AC=1;AN=192;BQB=0.67545;DP=4925;DP4=2491,2145,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.78457e-06;MQSB=0.965792;RPB=0.638578;SGB=36.2157;VDB=0.360442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Cat|N153H|602|LOC_Os07g05050|protein_coding|CODING|LOC_Os07g05050.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Cat|N153H|585|LOC_Os07g05050|protein_coding|CODING|LOC_Os07g05050.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Cat|N153H|330|LOC_Os07g05050|protein_coding|CODING|LOC_Os07g05050.3|2|1) FN750-S.SNP.7:2233944 chr07:002233944 0 W/2233944-2233944 FN750-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g05060 expressed protein SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2209-S.SNP.7:2246904 chr07:002246904 0 W/2246904-2246904 FN2209-S SNP A -> G AC=1;AN=190;BQB=0.860719;DP=5217;DP4=2336,2558,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.5469e-08;MQSB=0.752228;RPB=0.0979927;SGB=15.9981;VDB=0.0210124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.7:2246936 chr07:002246936 0 W/2246936-2246936 FN2302 SNP G -> C AC=1;AN=192;BQB=0.251119;DP=4975;DP4=2184,2460,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.29298e-11;MQSB=0.959053;RPB=0.978391;SGB=-95.9313;VDB=0.777329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.7:2250178 chr07:002250178 0 W/2250178-2250178 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.877432;DP=4031;DP4=1823,1936,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.52328e-08;MQSB=0.924534;RPB=0.439677;SGB=54.144;VDB=0.0237481;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.7:2254270 chr07:002254270 0 W/2254270-2254270 FN825-S Single Base Substitution C-A INTRON HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3679-S.SNP.7:2256048 chr07:002256048 0 W/2256048-2256048 FN3679-S SNP A -> C AC=1;AN=190;BQB=0.644612;DP=2805;DP4=1205,1466,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.86937e-13;MQSB=0.913668;RPB=0.512549;SGB=82.301;VDB=0.643612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.7:2256247 chr07:002256247 0 W/2256247-2256247 FN2646-S SNP A -> T AC=1;AN=200;BQB=0.948097;DP=4522;DP4=2133,2220,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.0133e-15;MQSB=0.794343;RPB=0.403065;SGB=100.316;VDB=0.5011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.7:2256248 chr07:002256248 0 W/2256248-2256248 FN2646-S SNP T -> A AC=1;AN=200;BQB=0.505091;DP=4538;DP4=2161,2209,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79167e-16;MQSB=0.804383;RPB=0.381256;SGB=50.3263;VDB=0.499892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.7:2256249 chr07:002256249 0 W/2256249-2256249 FN2646-S SNP A -> T AC=1;AN=200;BQB=0.999982;DP=4550;DP4=2160,2220,6,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.1571e-15;MQSB=0.796212;RPB=0.501323;SGB=72.7161;VDB=0.638466;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.7:2259251 chr07:002259251 0 W/2259251-2259251 FN1525-S Single Base Substitution T-C INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3505-S.SNP.7:2260419 chr07:002260419 0 W/2260419-2260419 FN3505-S SNP C -> T AC=2;AN=188;BQB=0.990769;DP=2799;DP4=1421,1310,5,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.51833e-11;MQSB=0.966076;RPB=0.998847;SGB=85.3253;VDB=0.575871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E380K|500|LOC_Os07g05120|protein_coding|CODING|LOC_Os07g05120.1|1|1) FN1064-S.SNP.7:2271148 chr07:002271148 0 W/2271148-2271148 FN1064-S Single Base Substitution T-A INTRON HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2497.SNP.7:2275703 chr07:002275703 0 W/2275703-2275703 FN2497 SNP G -> T AC=1;AN=200;BQB=0.937965;DP=4791;DP4=2394,2094,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32419e-08;MQSB=1;RPB=0.747265;SGB=63.4749;VDB=0.320698;EFF=INTRON(MODIFIER||||100|LOC_Os07g05145|protein_coding|CODING|LOC_Os07g05145.1|1|1) FN3424-S.SNP.7:2285617 chr07:002285617 0 W/2285617-2285617 FN3424-S SNP C -> T AC=1;AN=184;BQB=0.93469;DP=2546;DP4=1279,1187,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=3.69629e-05;MQSB=0.513242;RPB=0.994439;SGB=21.6609;VDB=0.662733;EFF=INTERGENIC(MODIFIER||||||||||1) FN-79.SNP.7:2285666 chr07:002285666 0 W/2285666-2285666 FN-79 Single Base Substitution C-T INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1573-S.SNP.7:2292129 chr07:002292129 0 W/2292129-2292129 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN4300-S.SNP.7:2292441 chr07:002292441 0 W/2292441-2292441 FN4300-S SNP A -> T AC=2;AN=170;BQB=0.489749;DP=2711;DP4=1149,1487,11,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.58967e-11;MQSB=0.950219;RPB=0.660105;SGB=36.9825;VDB=0.0844765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.7:2294935 chr07:002294935 0 W/2294935-2294935 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.949582;DP=2956;DP4=1206,1564,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08929e-08;MQSB=0.0340912;RPB=0.532199;SGB=2.23696;VDB=0.901844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.7:2294936 chr07:002294936 0 W/2294936-2294936 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.669348;DP=2945;DP4=1214,1577,2,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35006e-07;MQSB=0.0340835;RPB=0.668653;SGB=2.23696;VDB=0.550319;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.7:2295472 chr07:002295472 0 W/2295472-2295472 FN484-S Single Base Substitution A-G INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN989-S.SNP.7:2298766 chr07:002298766 0 W/2298766-2298766 FN989-S Single Base Substitution G-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1430-S.SNP.7:2307147 chr07:002307147 0 W/2307147-2307147 FN1430-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN838-S.SNP.7:2307595 chr07:002307595 0 W/2307595-2307595 FN838-S Single Base Substitution T-C INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3445-S.SNP.7:2314880 chr07:002314880 0 W/2314880-2314880 FN3445-S SNP T -> G AC=1;AN=184;BQB=0.997675;DP=2506;DP4=1292,1137,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9593e-07;MQSB=0.88776;RPB=0.699988;SGB=0.715177;VDB=0.742215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E766A|1065|LOC_Os07g05190|protein_coding|CODING|LOC_Os07g05190.1|3|1) FN-163.SNP.7:2315007 chr07:002315007 0 W/2315007-2315007 FN-163 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g05190 leucine-rich repeat family protein, putative, expressed SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-163.SNP.7:2315008 chr07:002315008 0 W/2315008-2315008 FN-163 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2682-S.SNP.7:2315390 chr07:002315390 0 W/2315390-2315390 FN2682-S SNP T -> A AC=1;AN=200;BQB=0.629508;DP=5108;DP4=2401,2447,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.66853e-06;MQSB=0.999546;RPB=0.609154;SGB=-0.141083;VDB=0.275958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N596I|1065|LOC_Os07g05190|protein_coding|CODING|LOC_Os07g05190.1|3|1) FN3541-S.SNP.7:2319483 chr07:002319483 0 W/2319483-2319483 FN3541-S SNP T -> C AC=1;AN=188;BQB=0.995696;DP=2564;DP4=1306,1162,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.43895e-07;MQSB=0.99734;RPB=0.872909;SGB=28.8977;VDB=0.539478;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.7:2325677 chr07:002325677 0 W/2325677-2325677 FN_831-4-1 Single Base Substitution C-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2554-S.SNP.7:2327212 chr07:002327212 0 W/2327212-2327212 FN2554-S SNP C -> T AC=2;AN=198;BQB=0.861604;DP=4118;DP4=2012,1731,24,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.20807e-20;MQSB=0.970628;RPB=0.540951;SGB=1.04222;VDB=0.0230503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.7:2340022 chr07:002340022 0 W/2340022-2340022 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.710825;DP=2477;DP4=958,1404,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000403714;MQB=1.62159e-12;MQSB=0.871049;RPB=0.713147;SGB=99.1879;VDB=0.980775;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.7:2345676 chr07:002345676 0 W/2345676-2345676 FN4064-S SNP C -> T AC=1;AN=168;BQB=0.792255;DP=2455;DP4=1208,1168,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.84245e-09;MQSB=0.998202;RPB=0.945955;SGB=22.1847;VDB=0.227355;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.7:2345678 chr07:002345678 0 W/2345678-2345678 FN4064-S SNP G -> A AC=1;AN=168;BQB=0.972935;DP=2433;DP4=1192,1147,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.46619e-09;MQSB=0.977898;RPB=0.985558;SGB=52.1728;VDB=0.214563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.7:2349647 chr07:002349647 0 W/2349647-2349647 FN1372-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2411.SNP.7:2350042 chr07:002350042 0 W/2350042-2350042 FN2411 SNP T -> C AC=2;AN=200;BQB=0.319561;DP=3274;DP4=1349,1627,16,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.18956e-20;MQSB=0.945808;RPB=0.994231;SGB=150.973;VDB=0.427894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.7:2354578 chr07:002354578 0 W/2354578-2354578 FN1716-S SNP G -> A AC=2;AN=188;BQB=0.692741;DP=2963;DP4=1787,1124,18,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.82841e-12;MQSB=0.97387;RPB=0.366463;SGB=51.5091;VDB=0.00371946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.7:2355995 chr07:002355995 0 W/2355995-2355995 FN2092-S SNP C -> G AC=2;AN=168;BQB=0.328672;DP=1797;DP4=897,847,17,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00890373;MQB=1.40895e-12;MQSB=0.277466;RPB=0.98231;SGB=21.3605;VDB=0.508428;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.7:2356905 chr07:002356905 0 W/2356905-2356905 FN1568-S Single Base Substitution T-C INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2359.SNP.7:2357141 chr07:002357141 0 W/2357141-2357141 FN2359 SNP G -> T AC=1;AN=192;BQB=0.856833;DP=4869;DP4=2348,2243,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00513452;MQB=2.07061e-10;MQSB=0.00226204;RPB=0.835626;SGB=-10.8182;VDB=0.875973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.7:2357143 chr07:002357143 0 W/2357143-2357143 FN2359 SNP C -> T AC=1;AN=192;BQB=0.850585;DP=4870;DP4=2337,2189,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00533881;MQB=1.75276e-10;MQSB=0.0020017;RPB=0.622014;SGB=-10.2539;VDB=0.692431;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.7:2358535 chr07:002358535 0 W/2358535-2358535 FN722-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g05220 hypothetical protein SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2403.SNP.7:2360028 chr07:002360028 0 W/2360028-2360028 FN2403 SNP G -> A AC=1;AN=200;BQB=0.860177;DP=3851;DP4=1813,1654,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11445e-05;MQSB=0.236001;RPB=0.797238;SGB=45.0543;VDB=0.379887;EFF=INTRON(MODIFIER||||213|LOC_Os07g05230|protein_coding|CODING|LOC_Os07g05230.1|2|1) FN1736-S.SNP.7:2361023 chr07:002361023 0 W/2361023-2361023 FN1736-S SNP C -> T AC=2;AN=188;BQB=0.584528;DP=1237;DP4=894,304,6,4;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.00481514;MQSB=0.168164;RPB=0.994052;SGB=25.3545;VDB=0.947685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.7:2372309 chr07:002372309 0 W/2372309-2372309 FN-120 Single Base Substitution G-A INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2788-S.SNP.7:2372748 chr07:002372748 0 W/2372748-2372748 FN2788-S SNP T -> C AC=1;AN=198;BQB=0.67027;DP=4261;DP4=1910,2104,18,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.53313e-19;MQSB=0.999998;RPB=0.972305;SGB=76.0565;VDB=0.445174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.7:2375067 chr07:002375067 0 W/2375067-2375067 FN1334-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3827-S.SNP.7:2375733 chr07:002375733 0 W/2375733-2375733 FN3827-S SNP A -> G AC=2;AN=190;BQB=0.904179;DP=2410;DP4=1133,1157,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.64737e-13;MQSB=0.972798;RPB=0.225317;SGB=103.742;VDB=0.278478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:2377677 chr07:002377677 0 W/2377677-2377677 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.890441;DP=3667;DP4=1686,1790,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000272702;MQB=8.02852e-08;MQSB=0.350074;RPB=0.588352;SGB=43.2083;VDB=0.323267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G82C|117|LOC_Os07g05270|protein_coding|CODING|LOC_Os07g05270.1|1|1) FN318-S.SNP.7:2378126 chr07:002378126 0 W/2378126-2378126 FN318-S Single Base Substitution A-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN318-S.SNP.7:2378127 chr07:002378127 0 W/2378127-2378127 FN318-S Single Base Substitution A-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3764-S.SNP.7:2393392 chr07:002393392 0 W/2393392-2393392 FN3764-S SNP G -> A AC=2;AN=190;BQB=0.975852;DP=2824;DP4=1241,1446,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.0892e-13;MQSB=0.997494;RPB=0.913315;SGB=60.9777;VDB=0.133679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.7:2395979 chr07:002395979 0 W/2395979-2395979 FN1300-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2456.SNP.7:2395979 chr07:002395979 0 W/2395979-2395979 FN2456 SNP G -> A AC=2;AN=200;BQB=0.308176;DP=4861;DP4=2285,2118,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.70176e-14;MQSB=0.939435;RPB=0.777174;SGB=22.3313;VDB=0.069765;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.7:2396868 chr07:002396868 0 W/2396868-2396868 FN1556-S Single Base Substitution A-G INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN4088-S.SNP.7:2400806 chr07:002400806 0 W/2400806-2400806 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.985724;DP=2995;DP4=1445,1435,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.00011e-08;MQSB=0.901903;RPB=0.577553;SGB=15.6115;VDB=0.319087;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.7:2406960 chr07:002406960 0 W/2406960-2406960 FN790-S Single Base Substitution T-G INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3434-S.SNP.7:2413055 chr07:002413055 0 W/2413055-2413055 FN3434-S SNP T -> A AC=1;AN=184;BQB=0.893115;DP=2579;DP4=1241,1242,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.44692e-05;MQSB=0.9745;RPB=0.459118;SGB=21.6609;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.7:2414296 chr07:002414296 0 W/2414296-2414296 FN2381 SNP G -> C AC=1;AN=192;BQB=0.907302;DP=4826;DP4=2483,2074,19,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.60644e-24;MQSB=0.979857;RPB=0.0610438;SGB=90.4583;VDB=0.130252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.7:2425728 chr07:002425728 0 W/2425728-2425728 FN3913-S SNP G -> T AC=1;AN=158;BQB=0.998555;DP=1976;DP4=1009,854,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.19409e-08;MQSB=0.926231;RPB=0.987334;SGB=21.4493;VDB=0.740498;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.7:2431066 chr07:002431066 0 W/2431066-2431066 FN1118-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g05330 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1508-S.SNP.7:2435242 chr07:002435242 0 W/2435242-2435242 FN1508-S Single Base Substitution A-T INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN779-S.SNP.7:2437440 chr07:002437440 0 W/2437440-2437440 FN779-S Single Base Substitution T-A INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1409-S.SNP.7:2442184 chr07:002442184 0 W/2442184-2442184 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN4202-S.SNP.7:2448776 chr07:002448776 0 W/2448776-2448776 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.974841;DP=2705;DP4=1413,1192,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.49496e-08;MQSB=0.997897;RPB=0.981634;SGB=61.2001;VDB=0.56451;EFF=INTRON(MODIFIER||||163|LOC_Os07g05350|protein_coding|CODING|LOC_Os07g05350.1|1|1) FN3326-S.SNP.7:2449083 chr07:002449083 0 W/2449083-2449083 FN3326-S SNP G -> A AC=2;AN=184;BQB=0.122568;DP=3222;DP4=1420,1610,23,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.51628e-10;MQSB=0.93784;RPB=0.799405;SGB=134.656;VDB=0.936987;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.7:2452854 chr07:002452854 0 W/2452854-2452854 FN420-S Single Base Substitution A-C INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN1467-S.SNP.7:2454744 chr07:002454744 0 W/2454744-2454744 FN1467-S Single Base Substitution A-G INTRON HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2434.SNP.7:2454846 chr07:002454846 0 W/2454846-2454846 FN2434 SNP A -> C AC=1;AN=200;BQB=0.00484214;DP=4505;DP4=1991,2254,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.10642;MQSB=0.685858;RPB=0.750362;SGB=35.8441;VDB=0.671615;EFF=SPLICE_SITE_REGION(LOW||||137|LOC_Os07g05360|protein_coding|CODING|LOC_Os07g05360.1|2|1),SPLICE_SITE_REGION(LOW||||83|LOC_Os07g05360|protein_coding|CODING|LOC_Os07g05360.2|2|1),INTRON(MODIFIER||||137|LOC_Os07g05360|protein_coding|CODING|LOC_Os07g05360.1|2|1),INTRON(MODIFIER||||83|LOC_Os07g05360|protein_coding|CODING|LOC_Os07g05360.2|2|1) FN-204.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN-204 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-281.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN-281 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1000-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN1000-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1114-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN1114-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1340-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN1340-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN2149-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN2149-S SNP T -> G AC=2;AN=168;BQB=0.131187;DP=3789;DP4=1683,2051,18,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.69156e-18;MQSB=0.956351;RPB=0.997359;SGB=-190.732;VDB=0.40608;EFF=UTR_3_PRIME(MODIFIER||64||849|LOC_Os07g05370|protein_coding|CODING|LOC_Os07g05370.1|3|1) FN2373.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN2373 SNP T -> G AC=2;AN=192;BQB=0.563856;DP=4838;DP4=2275,2232,28,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000206697;MQB=6.05306e-24;MQSB=0.420685;RPB=0.157706;SGB=93.0226;VDB=0.4695;EFF=UTR_3_PRIME(MODIFIER||64||849|LOC_Os07g05370|protein_coding|CODING|LOC_Os07g05370.1|3|1) FN2666-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN2666-S SNP T -> G AC=2;AN=200;BQB=0.437704;DP=4900;DP4=2368,2271,40,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.0772e-33;MQSB=0.704866;RPB=0.999976;SGB=78.5122;VDB=0.976592;EFF=UTR_3_PRIME(MODIFIER||64||849|LOC_Os07g05370|protein_coding|CODING|LOC_Os07g05370.1|3|1) FN410-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN410-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN439-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN449-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN449-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN523-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN523-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN623-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN623-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN709-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN709-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN773-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN773-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN860-S.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN860-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN_N1-130-1.SNP.7:2458484 chr07:002458484 0 W/2458484-2458484 FN_N1-130-1 Single Base Substitution T-G Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1475-S.SNP.7:2466085 chr07:002466085 0 W/2466085-2466085 FN1475-S Single Base Substitution A-C INTRON HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN4101-S.SNP.7:2474401 chr07:002474401 0 W/2474401-2474401 FN4101-S SNP A -> T AC=1;AN=182;BQB=0.971619;DP=2825;DP4=1141,1585,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.67205e-07;MQSB=0.949269;RPB=0.740105;SGB=42.6494;VDB=0.715946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.7:2495737 chr07:002495737 0 W/2495737-2495737 FN2789-S SNP G -> T AC=1;AN=198;BQB=0.991306;DP=3756;DP4=1807,1791,8,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.47373e-13;MQSB=0.140456;RPB=0.892124;SGB=52.7004;VDB=0.584135;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.7:2523944 chr07:002523944 0 W/2523944-2523944 FN4050-S SNP G -> A AC=2;AN=168;BQB=0.890364;DP=2691;DP4=1286,1199,12,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.2101e-17;MQSB=0.628154;RPB=0.386742;SGB=140.789;VDB=0.0827616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.7:2524882 chr07:002524882 0 W/2524882-2524882 FN2755-S SNP G -> C AC=2;AN=200;BQB=0.579524;DP=5102;DP4=2397,2380,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00352803;MQB=5.07778e-27;MQSB=0.324654;RPB=0.979073;SGB=155.635;VDB=0.0099813;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.7:2525489 chr07:002525489 0 W/2525489-2525489 FN3924-S SNP A -> T AC=1;AN=158;BQB=0.469007;DP=2237;DP4=1074,1060,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000194815;MQSB=0.491975;RPB=0.162068;SGB=30.704;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.7:2528278 chr07:002528278 0 W/2528278-2528278 FN3548-S SNP T -> C AC=2;AN=188;BQB=0.968763;DP=2673;DP4=1185,1393,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.58435e-14;MQSB=0.937901;RPB=0.998356;SGB=85.5904;VDB=0.322475;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.7:2530624 chr07:002530624 0 W/2530624-2530624 FN-408 Single Base Substitution G-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN1438-S.SNP.7:2547471 chr07:002547471 0 W/2547471-2547471 FN1438-S Single Base Substitution G-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1438-S.SNP.7:2547472 chr07:002547472 0 W/2547472-2547472 FN1438-S Single Base Substitution C-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1523-S.SNP.7:2548357 chr07:002548357 0 W/2548357-2548357 FN1523-S Single Base Substitution T-A INTERGENIC Homo SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN3393-S.SNP.7:2549453 chr07:002549453 0 W/2549453-2549453 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.928231;DP=3060;DP4=1529,1445,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91376e-10;MQSB=0.973507;RPB=0.629495;SGB=60.4004;VDB=0.528524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.7:2552500 chr07:002552500 0 W/2552500-2552500 FN2260-S SNP C -> G AC=1;AN=190;BQB=0.998793;DP=5163;DP4=2546,2055,23,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193686;MQB=7.07614e-22;MQSB=0.937572;RPB=0.722688;SGB=84.9528;VDB=0.0212273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.7:2559206 chr07:002559206 0 W/2559206-2559206 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.441922;DP=4679;DP4=2506,1947,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24473e-08;MQSB=0.955048;RPB=0.40991;SGB=43.8747;VDB=0.729547;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.7:2573155 chr07:002573155 0 W/2573155-2573155 FN-290 Single Base Substitution G-A INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN497-S.SNP.7:2575327 chr07:002575327 0 W/2575327-2575327 FN497-S Single Base Substitution G-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN869-S.SNP.7:2579488 chr07:002579488 0 W/2579488-2579488 FN869-S Single Base Substitution C-T INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN1018-S.SNP.7:2582620 chr07:002582620 0 W/2582620-2582620 FN1018-S Single Base Substitution T-G INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN4187-S.SNP.7:2583662 chr07:002583662 0 W/2583662-2583662 FN4187-S SNP A -> G AC=1;AN=170;BQB=0.865831;DP=2636;DP4=1322,1184,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.60628e-08;MQSB=0.961229;RPB=0.493964;SGB=52.3148;VDB=0.121089;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F1588L|1774|LOC_Os07g05540|protein_coding|CODING|LOC_Os07g05540.1|8|1) FN-252.SNP.7:2586170 chr07:002586170 0 W/2586170-2586170 FN-252 Single Base Substitution C-T INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2375.SNP.7:2588539 chr07:002588539 0 W/2588539-2588539 FN2375 SNP G -> T AC=1;AN=192;BQB=0.91732;DP=4793;DP4=2324,2220,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.58326e-05;MQSB=0.999444;RPB=0.848221;SGB=49.2105;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aAa|T843K|1774|LOC_Os07g05540|protein_coding|CODING|LOC_Os07g05540.1|4|1) FN4180-S.SNP.7:2593107 chr07:002593107 0 W/2593107-2593107 FN4180-S SNP C -> T AC=1;AN=170;BQB=0.955233;DP=1767;DP4=920,765,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00041797;MQSB=0.981019;RPB=0.948742;SGB=30.1021;VDB=0.464345;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.7:2593198 chr07:002593198 0 W/2593198-2593198 FN-83 Single Base Substitution C-T INTERGENIC HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1446-S.SNP.7:2596545 chr07:002596545 0 W/2596545-2596545 FN1446-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g05550 expressed protein SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2342.SNP.7:2599525 chr07:002599525 0 W/2599525-2599525 FN2342 SNP C -> A AC=2;AN=192;BQB=0.999364;DP=4549;DP4=2294,1982,17,10;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.53668e-15;MQSB=0.991533;RPB=0.755958;SGB=86.1165;VDB=0.690541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W439L|592|LOC_Os07g05560|protein_coding|CODING|LOC_Os07g05560.1|1|1) FN621-S.SNP.7:2599614 chr07:002599614 0 W/2599614-2599614 FN621-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g05560 expressed protein SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN4100-S.SNP.7:2605420 chr07:002605420 0 W/2605420-2605420 FN4100-S SNP G -> C AC=1;AN=182;BQB=0.497703;DP=3100;DP4=1333,1656,20,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.95313e-15;MQSB=0.799355;RPB=0.262264;SGB=63.3178;VDB=0.645857;EFF=INTRON(MODIFIER||||731|LOC_Os07g05570|protein_coding|CODING|LOC_Os07g05570.1|1|1),INTRON(MODIFIER||||692|LOC_Os07g05570|protein_coding|CODING|LOC_Os07g05570.2|1|1) FN1034-S.SNP.7:2609968 chr07:002609968 0 W/2609968-2609968 FN1034-S Single Base Substitution C-T INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN4258-S.SNP.7:2610565 chr07:002610565 0 W/2610565-2610565 FN4258-S SNP T -> A AC=1;AN=170;BQB=0.969655;DP=2527;DP4=1180,1236,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.111688;MQSB=0.094621;RPB=0.95722;SGB=21.1076;VDB=0.857718;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.7:2618135 chr07:002618135 0 W/2618135-2618135 FN_N2-29a-1 Single Base Substitution G-T HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN_N2-29a-1.SNP.7:2618148 chr07:002618148 0 W/2618148-2618148 FN_N2-29a-1 Single Base Substitution G-T HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN891-S.SNP.7:2625305 chr07:002625305 0 W/2625305-2625305 FN891-S Single Base Substitution A-G INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3698-S.SNP.7:2627054 chr07:002627054 0 W/2627054-2627054 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.982132;DP=2606;DP4=1188,1348,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65684e-10;MQSB=0.870901;RPB=0.289611;SGB=76.4186;VDB=0.354859;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.7:2628562 chr07:002628562 0 W/2628562-2628562 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.99676;DP=3427;DP4=1743,1613,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.017508;MQB=0.902157;MQSB=8.29817e-09;RPB=0.0714668;SGB=65.6427;VDB=0.0262629;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L70|1446|LOC_Os07g05600|protein_coding|CODING|LOC_Os07g05600.1|1|1) FN939-S.SNP.7:2630111 chr07:002630111 0 W/2630111-2630111 FN939-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g05600 retrotransposon protein, putative, unclassified, expressed SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2194-S.SNP.7:2636878 chr07:002636878 0 W/2636878-2636878 FN2194-S SNP T -> C AC=1;AN=190;BQB=0.99782;DP=4786;DP4=2206,2206,17,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.14333e-17;MQSB=0.353262;RPB=0.443801;SGB=121.394;VDB=0.989693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T416A|897|LOC_Os07g05610|protein_coding|CODING|LOC_Os07g05610.4|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T416A|943|LOC_Os07g05610|protein_coding|CODING|LOC_Os07g05610.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T416A|943|LOC_Os07g05610|protein_coding|CODING|LOC_Os07g05610.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T416A|942|LOC_Os07g05610|protein_coding|CODING|LOC_Os07g05610.3|5|1) FN1363-S.SNP.7:2650189 chr07:002650189 0 W/2650189-2650189 FN1363-S Single Base Substitution T-A INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2698-S.SNP.7:2654205 chr07:002654205 0 W/2654205-2654205 FN2698-S SNP T -> C AC=1;AN=200;BQB=0.995747;DP=4610;DP4=2012,2357,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08738e-14;MQSB=0.961117;RPB=0.401978;SGB=72.7161;VDB=0.800101;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.7:2655005 chr07:002655005 0 W/2655005-2655005 FN4156-S SNP A -> G AC=1;AN=170;BQB=0.66185;DP=2151;DP4=1064,1044,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.20747e-08;MQSB=0.969703;RPB=0.952199;SGB=17.4413;VDB=0.863259;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.7:2656638 chr07:002656638 0 W/2656638-2656638 FN780-S Single Base Substitution C-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3713-S.SNP.7:2663505 chr07:002663505 0 W/2663505-2663505 FN3713-S SNP T -> A AC=1;AN=190;BQB=0.851096;DP=2810;DP4=1049,1583,2,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.63857e-07;MQSB=0.54635;RPB=0.687339;SGB=7.21887;VDB=0.920053;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.7:2676330 chr07:002676330 0 W/2676330-2676330 FN861-S Single Base Substitution C-T INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN728-S.SNP.7:2690504 chr07:002690504 0 W/2690504-2690504 FN728-S Single Base Substitution T-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. W721-2-1.SNP.7:2694551 chr07:002694551 0 W/2694551-2694551 W721-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3730-S.SNP.7:2696791 chr07:002696791 0 W/2696791-2696791 FN3730-S SNP T -> C AC=1;AN=190;BQB=0.989722;DP=2719;DP4=1315,1280,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.37492e-19;MQSB=0.947866;RPB=0.689472;SGB=140.173;VDB=0.234941;EFF=INTRON(MODIFIER||||105|LOC_Os07g05660|protein_coding|CODING|LOC_Os07g05660.1|1|1) FN3343-S.SNP.7:2697399 chr07:002697399 0 W/2697399-2697399 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.890188;DP=2953;DP4=1356,1467,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.39841e-08;MQSB=0.942667;RPB=0.544324;SGB=66.8296;VDB=0.980569;EFF=INTRON(MODIFIER||||105|LOC_Os07g05660|protein_coding|CODING|LOC_Os07g05660.1|2|1) FN4202-S.SNP.7:2703318 chr07:002703318 0 W/2703318-2703318 FN4202-S SNP A -> T AC=1;AN=170;BQB=0.995332;DP=2022;DP4=1023,940,12,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.37419e-14;MQSB=0.513203;RPB=0.447467;SGB=96.7413;VDB=0.263132;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.7:2716436 chr07:002716436 0 W/2716436-2716436 FN-362 Single Base Substitution G-T INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3999-S.SNP.7:2716592 chr07:002716592 0 W/2716592-2716592 FN3999-S SNP A -> G AC=2;AN=168;BQB=0.973238;DP=2563;DP4=1166,1285,6,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.66872e-09;MQSB=0.995738;RPB=0.819214;SGB=65.4653;VDB=0.768478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.7:2718496 chr07:002718496 0 W/2718496-2718496 FN-169 Single Base Substitution A-G INTRON HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3323-S.SNP.7:2731201 chr07:002731201 0 W/2731201-2731201 FN3323-S SNP G -> C AC=1;AN=184;BQB=0.449013;DP=3440;DP4=1886,1447,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.30308e-06;MQSB=0.998326;RPB=0.919527;SGB=-2.32838;VDB=0.97096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.7:2733849 chr07:002733849 0 W/2733849-2733849 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.027885;DP=3111;DP4=1772,1305,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00111494;MQSB=0.998217;RPB=0.573166;SGB=-16.2342;VDB=0.230144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.7:2738218 chr07:002738218 0 W/2738218-2738218 FN2587-S SNP C -> T AC=1;AN=198;BQB=0.808401;DP=4669;DP4=2045,2414,13,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.98943e-17;MQSB=0.566796;RPB=0.963354;SGB=112.051;VDB=0.739727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.7:2738610 chr07:002738610 0 W/2738610-2738610 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.875251;DP=2958;DP4=1260,1617,3,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2538e-10;MQSB=0.962208;RPB=0.8638;SGB=66.8296;VDB=0.110651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.7:2750163 chr07:002750163 0 W/2750163-2750163 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1430-S.SNP.7:2750554 chr07:002750554 0 W/2750554-2750554 FN1430-S Single Base Substitution T-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3803-S.SNP.7:2755078 chr07:002755078 0 W/2755078-2755078 FN3803-S SNP T -> A AC=1;AN=190;BQB=0.879078;DP=2330;DP4=1064,1145,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.7057e-10;MQSB=0.862195;RPB=0.918171;SGB=64.5316;VDB=0.925901;EFF=INTRON(MODIFIER||||445|LOC_Os07g05720|protein_coding|CODING|LOC_Os07g05720.1|1|1) FN1070-S.SNP.7:2758816 chr07:002758816 0 W/2758816-2758816 FN1070-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g05740 receptor-like protein kinase 2 precursor, putative, expressed SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3615-S.SNP.7:2762289 chr07:002762289 0 W/2762289-2762289 FN3615-S SNP A -> G AC=2;AN=190;BQB=0.915208;DP=2745;DP4=1355,1255,13,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.41767e-15;MQSB=0.379979;RPB=0.304241;SGB=96.5165;VDB=0.911991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.7:2764258 chr07:002764258 0 W/2764258-2764258 FN2530-S SNP G -> C AC=1;AN=198;BQB=0.978802;DP=4040;DP4=1850,1966,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000247525;MQB=0.000167696;MQSB=0.292974;RPB=0.891493;SGB=22.1736;VDB=0.0862178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:2765420 chr07:002765420 0 W/2765420-2765420 FN2554-S SNP G -> C AC=1;AN=198;BQB=0.444545;DP=4275;DP4=2029,1998,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.09334e-10;MQSB=0.261535;RPB=0.515752;SGB=9.3494;VDB=0.614059;EFF=UTR_5_PRIME(MODIFIER||2057||222|LOC_Os07g05750|protein_coding|CODING|LOC_Os07g05750.1|1|1) FN1175-S.SNP.7:2767723 chr07:002767723 0 W/2767723-2767723 FN1175-S Single Base Substitution C-T STOP_GAINED HET LOC_Os07g05750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-334.SNP.7:2768423 chr07:002768423 0 W/2768423-2768423 FN-334 Single Base Substitution C-A UTR_3_PRIME HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1695-S.SNP.7:2771398 chr07:002771398 0 W/2771398-2771398 FN1695-S SNP G -> A AC=2;AN=188;BQB=0.0185697;DP=3739;DP4=1738,1921,24,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.63463e-17;MQSB=0.89194;RPB=0.695352;SGB=-147.858;VDB=0.890182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.7:2786099 chr07:002786099 0 W/2786099-2786099 FN1251-S Single Base Substitution T-C INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN2621-S.SNP.7:2789161 chr07:002789161 0 W/2789161-2789161 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.950716;DP=7105;DP4=3703,3047,10,15;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.258128;MQB=0.477763;MQSB=1.49523e-06;RPB=0.308971;SGB=20.7261;VDB=0.0282284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.7:2790267 chr07:002790267 0 W/2790267-2790267 FN2320 SNP G -> A AC=1;AN=192;BQB=0.0122163;DP=5408;DP4=1278,3738,5,16;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.245007;MQB=0.659165;MQSB=0;RPB=0.938544;SGB=-114.183;VDB=0.9274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.7:2813422 chr07:002813422 0 W/2813422-2813422 FN2474 SNP T -> A AC=1;AN=200;BQB=0.826786;DP=4944;DP4=2509,2196,7,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00121359;MQB=0.000470571;MQSB=0.000821763;RPB=0.334477;SGB=43.8747;VDB=0.0961008;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V157|907|LOC_Os07g05850|protein_coding|CODING|LOC_Os07g05850.1|1|1) FN2096-S.SNP.7:2817353 chr07:002817353 0 W/2817353-2817353 FN2096-S SNP A -> T AC=2;AN=168;BQB=0.744677;DP=4067;DP4=1959,2019,22,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000245881;MQB=2.2546e-19;MQSB=0.728539;RPB=0.781751;SGB=-101.021;VDB=0.313311;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.7:2822451 chr07:002822451 0 W/2822451-2822451 FN_770-6-1 Single Base Substitution C-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1435-S.SNP.7:2823943 chr07:002823943 0 W/2823943-2823943 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN450-S.SNP.7:2826055 chr07:002826055 0 W/2826055-2826055 FN450-S Single Base Substitution A-G INTRON HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN2602-S.SNP.7:2833344 chr07:002833344 0 W/2833344-2833344 FN2602-S SNP T -> C AC=1;AN=198;BQB=0.997806;DP=4374;DP4=1819,2121,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.38579e-09;MQSB=0.791372;RPB=0.974633;SGB=29.3443;VDB=0.152864;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.7:2838010 chr07:002838010 0 W/2838010-2838010 FN-219 Single Base Substitution A-T INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN975-S.SNP.7:2840710 chr07:002840710 0 W/2840710-2840710 FN975-S Single Base Substitution C-G INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN3887-S.SNP.7:2842064 chr07:002842064 0 W/2842064-2842064 FN3887-S SNP T -> A AC=1;AN=158;BQB=0.987099;DP=2349;DP4=1098,1158,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.96698e-12;MQSB=0.959141;RPB=0.519641;SGB=77.6532;VDB=0.291672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.7:2847389 chr07:002847389 0 W/2847389-2847389 FN1003-S Single Base Substitution T-C INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN2267-S.SNP.7:2851654 chr07:002851654 0 W/2851654-2851654 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.948697;DP=3498;DP4=1868,1387,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.106632;MQB=0.751902;MQSB=4.27088e-41;RPB=0.631477;SGB=62.7569;VDB=0.499047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:2860053 chr07:002860053 0 W/2860053-2860053 FN2554-S SNP G -> A AC=2;AN=198;BQB=0.999091;DP=3319;DP4=1890,1178,23,13;HOB=0.019998;ICB=0.495001;MQ=32;MQ0F=0.119313;MQB=0.915597;MQSB=2.33298e-08;RPB=0.879839;SGB=78.6516;VDB=0.864931;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.7:2868294 chr07:002868294 0 W/2868294-2868294 FN2596-S SNP T -> C AC=1;AN=198;BQB=0.991962;DP=4036;DP4=2274,1557,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20443e-08;MQSB=0.999184;RPB=0.796399;SGB=18.9639;VDB=0.514339;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.7:2869208 chr07:002869208 0 W/2869208-2869208 FN-257 Single Base Substitution A-G INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN1339-S.SNP.7:2874500 chr07:002874500 0 W/2874500-2874500 FN1339-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.7:2874500 chr07:002874500 0 W/2874500-2874500 FN2311 SNP C -> T AC=2;AN=192;BQB=0.937807;DP=5116;DP4=2354,2117,32,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.39511e-31;MQSB=0.980886;RPB=0.695587;SGB=11.1913;VDB=0.916481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.7:2876601 chr07:002876601 0 W/2876601-2876601 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.996384;DP=4870;DP4=2675,1930,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36512e-07;MQSB=0.993902;RPB=0.826097;SGB=4.67442;VDB=0.97943;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.7:2881376 chr07:002881376 0 W/2881376-2881376 FN753-S Single Base Substitution T-C INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN4184-S.SNP.7:2892580 chr07:002892580 0 W/2892580-2892580 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.973159;DP=2131;DP4=834,1228,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.69835e-10;MQSB=0.999094;RPB=0.813343;SGB=70.0854;VDB=0.540351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P23L|1460|LOC_Os07g05960|protein_coding|CODING|LOC_Os07g05960.1|1|1) FN4184-S.SNP.7:2892581 chr07:002892581 0 W/2892581-2892581 FN4184-S SNP G -> T AC=1;AN=170;BQB=0.961488;DP=2122;DP4=824,1228,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.53519e-10;MQSB=0.999789;RPB=0.860726;SGB=70.0854;VDB=0.514804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P23T|1460|LOC_Os07g05960|protein_coding|CODING|LOC_Os07g05960.1|1|1) FN3561-S.SNP.7:2894475 chr07:002894475 0 W/2894475-2894475 FN3561-S SNP C -> T AC=2;AN=188;BQB=0.765926;DP=3347;DP4=1721,1482,24,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.20741e-20;MQSB=0.948212;RPB=0.990612;SGB=135.196;VDB=0.2548;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.7:2895261 chr07:002895261 0 W/2895261-2895261 FN523-S Single Base Substitution C-T INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.7:2895261 chr07:002895261 0 W/2895261-2895261 FN532-S Single Base Substitution C-T INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN1333-S.SNP.7:2898270 chr07:002898270 0 W/2898270-2898270 FN1333-S Single Base Substitution T-A INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2494.SNP.7:2906092 chr07:002906092 0 W/2906092-2906092 FN2494 SNP T -> A AC=1;AN=200;BQB=0.231039;DP=5118;DP4=2561,2270,13,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0265729;MQB=0.0107336;MQSB=0.0712882;RPB=0.628014;SGB=-9.47921;VDB=0.180097;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.7:2906909 chr07:002906909 0 W/2906909-2906909 FN4089-S SNP T -> A AC=1;AN=182;BQB=0.800018;DP=3348;DP4=1670,1547,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=39;MQ0F=0.0878136;MQB=0.248846;MQSB=0.805575;RPB=0.589269;SGB=66.6657;VDB=0.147164;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.7:2907200 chr07:002907200 0 W/2907200-2907200 FN4078-S SNP T -> C AC=1;AN=182;BQB=0.473055;DP=2928;DP4=1332,1486,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.00068306;MQB=0.174688;MQSB=0.0179774;RPB=0.696201;SGB=6.66046;VDB=0.772576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.7:2907825 chr07:002907825 0 W/2907825-2907825 FN2648-S SNP A -> G AC=2;AN=200;BQB=0.182602;DP=4616;DP4=2266,2104,20,25;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000433276;MQB=1.95949e-23;MQSB=0.168443;RPB=0.446557;SGB=201.63;VDB=0.218937;EFF=INTRON(MODIFIER||||99|LOC_Os07g06010|protein_coding|CODING|LOC_Os07g06010.1|1|1) FN4201-S.SNP.7:2907825 chr07:002907825 0 W/2907825-2907825 FN4201-S SNP A -> G AC=2;AN=170;BQB=0.93108;DP=2388;DP4=1187,1097,9,21;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00041876;MQB=5.92325e-13;MQSB=0.0966935;RPB=0.781879;SGB=127.84;VDB=0.879674;EFF=INTRON(MODIFIER||||99|LOC_Os07g06010|protein_coding|CODING|LOC_Os07g06010.1|1|1) FN2364.SNP.7:2909742 chr07:002909742 0 W/2909742-2909742 FN2364 SNP G -> A AC=1;AN=192;BQB=2.06953e-06;DP=5944;DP4=2605,2786,37,8;HOB=5.42535e-05;ICB=0.000109072;MQ=14;MQ0F=0.409489;MQB=0.771803;MQSB=0;RPB=0.0507855;SGB=-543.553;VDB=0.110544;EFF=INTERGENIC(MODIFIER||||||||||1) FN660-S.SNP.7:2913446 chr07:002913446 0 W/2913446-2913446 FN660-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1209-S.SNP.7:2915642 chr07:002915642 0 W/2915642-2915642 FN1209-S Single Base Substitution G-A INTRON HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3115-S.SNP.7:2916360 chr07:002916360 0 W/2916360-2916360 FN3115-S SNP A -> G AC=2;AN=184;BQB=0.889879;DP=3637;DP4=1329,2110,17,30;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0984328;MQB=0.941529;MQSB=3.9577e-08;RPB=0.975894;SGB=52.456;VDB=0.144338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L105P|1760|LOC_Os07g06020|protein_coding|CODING|LOC_Os07g06020.1|2|1) FN3950-S.SNP.7:2916570 chr07:002916570 0 W/2916570-2916570 FN3950-S SNP C -> G AC=2;AN=168;BQB=0.259301;DP=3229;DP4=1834,1214,16,20;HOB=0.0235261;ICB=0.494119;MQ=19;MQ0F=0.402292;MQB=0.579511;MQSB=0.874112;RPB=0.66405;SGB=-7.61782;VDB=0.932027;EFF=INTRON(MODIFIER||||1760|LOC_Os07g06020|protein_coding|CODING|LOC_Os07g06020.1|1|1) FN2182-S.SNP.7:2934278 chr07:002934278 0 W/2934278-2934278 FN2182-S SNP A -> T AC=2;AN=190;BQB=0.943007;DP=5471;DP4=2762,2466,40,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.30356e-37;MQSB=0.93476;RPB=0.476208;SGB=238.672;VDB=0.808848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.7:2944810 chr07:002944810 0 W/2944810-2944810 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.688536;DP=2526;DP4=1356,1134,16,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.94431e-11;MQSB=0.926266;RPB=0.418967;SGB=71.4172;VDB=0.307092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.7:2952487 chr07:002952487 0 W/2952487-2952487 FN4174-S SNP T -> G AC=1;AN=170;BQB=0.995909;DP=2319;DP4=1032,1223,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.81206e-10;MQSB=0.9928;RPB=0.819454;SGB=70.0854;VDB=0.0708308;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.7:2953033 chr07:002953033 0 W/2953033-2953033 FN889-S Single Base Substitution C-T INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN996-S.SNP.7:2958685 chr07:002958685 0 W/2958685-2958685 FN996-S Single Base Substitution G-A INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1286-S.SNP.7:2967536 chr07:002967536 0 W/2967536-2967536 FN1286-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN632-S.SNP.7:2976471 chr07:002976471 0 W/2976471-2976471 FN632-S Single Base Substitution G-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN3310-S.SNP.7:2980084 chr07:002980084 0 W/2980084-2980084 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.719832;DP=2620;DP4=1373,1160,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.11805e-07;MQSB=0.966414;RPB=0.576503;SGB=39.2697;VDB=0.701041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.7:3035356 chr07:003035356 0 W/3035356-3035356 FN1438-S Single Base Substitution C-T INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3827-S.SNP.7:3038410 chr07:003038410 0 W/3038410-3038410 FN3827-S SNP G -> C AC=2;AN=190;BQB=0.724202;DP=1364;DP4=586,695,10,11;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.142962;MQB=0.349259;MQSB=0.285235;RPB=0.594499;SGB=71.5074;VDB=0.122696;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.7:3105361 chr07:003105361 0 W/3105361-3105361 FN-334 Single Base Substitution G-A UTR_3_PRIME HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN974-S.SNP.7:3109954 chr07:003109954 0 W/3109954-3109954 FN974-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN2307.SNP.7:3110638 chr07:003110638 0 W/3110638-3110638 FN2307 SNP G -> A AC=1;AN=192;BQB=0.804808;DP=4858;DP4=2345,2230,20,22;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.75057e-15;MQSB=1.35986e-06;RPB=0.999923;SGB=93.0226;VDB=0.0180383;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S152|200|LOC_Os07g06400|protein_coding|CODING|LOC_Os07g06400.1|2|1) FN868-S.SNP.7:3112623 chr07:003112623 0 W/3112623-3112623 FN868-S Single Base Substitution A-G INTRON HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3438-S.SNP.7:3122191 chr07:003122191 0 W/3122191-3122191 FN3438-S SNP T -> A AC=1;AN=184;BQB=0.528859;DP=2506;DP4=1262,1159,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.97378e-09;MQSB=0.998504;RPB=0.763877;SGB=66.8296;VDB=0.437013;EFF=INTRON(MODIFIER||||324|LOC_Os07g06440|protein_coding|CODING|LOC_Os07g06440.1|11|1) FN4099-S.SNP.7:3137685 chr07:003137685 0 W/3137685-3137685 FN4099-S SNP A -> T AC=2;AN=182;BQB=0.985455;DP=1254;DP4=1025,179,13,1;HOB=0.0217365;ICB=0.494567;MQ=40;MQ0F=0.0167464;MQB=2.88685e-05;MQSB=4.26067e-05;RPB=0.912046;SGB=57.644;VDB=0.273871;EFF=INTERGENIC(MODIFIER||||||||||1) FN4099-S.SNP.7:3137687 chr07:003137687 0 W/3137687-3137687 FN4099-S SNP G -> T AC=2;AN=180;BQB=0.921267;DP=1257;DP4=1019,192,13,1;HOB=0.0219753;ICB=0.494507;MQ=40;MQ0F=0.017502;MQB=2.81325e-05;MQSB=9.58424e-05;RPB=0.893689;SGB=57.644;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.7:3142393 chr07:003142393 0 W/3142393-3142393 FN2756-S SNP G -> T AC=2;AN=200;BQB=0.99035;DP=4336;DP4=2106,2000,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.33705e-24;MQSB=0.965727;RPB=0.0208408;SGB=52.8295;VDB=0.0874878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.7:3142522 chr07:003142522 0 W/3142522-3142522 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.777989;DP=4521;DP4=2404,1914,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09853e-13;MQSB=0.83354;RPB=0.999935;SGB=76.3213;VDB=0.99533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.7:3145563 chr07:003145563 0 W/3145563-3145563 FN1103-S Single Base Substitution G-C INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2551-S.SNP.7:3145575 chr07:003145575 0 W/3145575-3145575 FN2551-S SNP T -> C AC=1;AN=198;BQB=0.991136;DP=4405;DP4=2219,1952,16,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22191e-13;MQSB=0.676329;RPB=0.983749;SGB=104.69;VDB=0.77309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.7:3150426 chr07:003150426 0 W/3150426-3150426 FN2312 SNP G -> T AC=2;AN=192;BQB=0.933462;DP=5157;DP4=2515,2333,35,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.31375e-31;MQSB=0.997347;RPB=0.0339262;SGB=149.438;VDB=0.909335;EFF=UTR_3_PRIME(MODIFIER||983||359|LOC_Os07g06490|protein_coding|CODING|LOC_Os07g06490.1|2|1) FN3834-S.SNP.7:3156175 chr07:003156175 0 W/3156175-3156175 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.99542;DP=2972;DP4=1647,1240,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.00222007;MQSB=0.663018;RPB=0.0918518;SGB=39.9877;VDB=0.0293045;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H45|496|LOC_Os07g06500|protein_coding|CODING|LOC_Os07g06500.1|3|1) FN949-S.SNP.7:3165467 chr07:003165467 0 W/3165467-3165467 FN949-S Single Base Substitution G-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2440.SNP.7:3187676 chr07:003187676 0 W/3187676-3187676 FN2440 SNP C -> T AC=2;AN=198;BQB=0.0544378;DP=4192;DP4=2078,1778,26,23;HOB=0.019998;ICB=0.495001;MQ=31;MQ0F=0;MQB=1.31114e-21;MQSB=0.430441;RPB=0.836187;SGB=166.451;VDB=0.0367164;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.7:3187676 chr07:003187676 0 W/3187676-3187676 FN980-S Single Base Substitution C-T INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3090-S.SNP.7:3212320 chr07:003212320 0 W/3212320-3212320 FN3090-S SNP G -> A AC=1;AN=184;BQB=0.700029;DP=2856;DP4=1491,1272,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.57691e-07;MQSB=0.984724;RPB=0.650176;SGB=28.7043;VDB=0.304945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R548H|885|LOC_Os07g06610|protein_coding|CODING|LOC_Os07g06610.1|10|1),SPLICE_SITE_REGION(LOW||||885|LOC_Os07g06610|protein_coding|CODING|LOC_Os07g06610.1|10|1) FN452-S.SNP.7:3213730 chr07:003213730 0 W/3213730-3213730 FN452-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN1406-S.SNP.7:3226839 chr07:003226839 0 W/3226839-3226839 FN1406-S Single Base Substitution A-T INTRON HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN1140-S.SNP.7:3228386 chr07:003228386 0 W/3228386-3228386 FN1140-S Single Base Substitution A-T INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1140-S.SNP.7:3228387 chr07:003228387 0 W/3228387-3228387 FN1140-S Single Base Substitution A-T INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2666-S.SNP.7:3231286 chr07:003231286 0 W/3231286-3231286 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.525273;DP=6909;DP4=3082,3309,20,19;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.324215;MQB=0.31865;MQSB=2.75515e-12;RPB=0.826255;SGB=173.999;VDB=0.549099;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A165|1845|LOC_Os07g06630|protein_coding|CODING|LOC_Os07g06630.1|1|1) FN3710-S.SNP.7:3243281 chr07:003243281 0 W/3243281-3243281 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.895894;DP=2966;DP4=1428,1412,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.87641e-07;MQSB=0.970366;RPB=0.804163;SGB=25.439;VDB=0.84021;EFF=UTR_3_PRIME(MODIFIER||586||199|LOC_Os07g06644|protein_coding|CODING|LOC_Os07g06644.3|1|1),UTR_3_PRIME(MODIFIER||586||199|LOC_Os07g06644|protein_coding|CODING|LOC_Os07g06644.2|1|1),INTRON(MODIFIER||||199|LOC_Os07g06644|protein_coding|CODING|LOC_Os07g06644.1|1|1) FN1062-S.SNP.7:3245957 chr07:003245957 0 W/3245957-3245957 FN1062-S Single Base Substitution G-T INTRON HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN507-S.SNP.7:3245957 chr07:003245957 0 W/3245957-3245957 FN507-S Single Base Substitution G-T INTRON HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN3800-S.SNP.7:3247346 chr07:003247346 0 W/3247346-3247346 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.780997;DP=2892;DP4=1156,1618,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94269e-10;MQSB=0.930775;RPB=0.844177;SGB=71.8647;VDB=0.0261219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.7:3248153 chr07:003248153 0 W/3248153-3248153 FN3720-S SNP G -> T AC=1;AN=190;BQB=0.697366;DP=2805;DP4=1233,1462,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.03216e-05;MQSB=0.0103819;RPB=0.993373;SGB=26.2136;VDB=0.625273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.7:3265457 chr07:003265457 0 W/3265457-3265457 FN1355-S Single Base Substitution T-A INTRON HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4039-S.SNP.7:3273413 chr07:003273413 0 W/3273413-3273413 FN4039-S SNP T -> C AC=1;AN=168;BQB=0.821833;DP=2825;DP4=1420,1262,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=3.95708e-11;MQSB=0.477957;RPB=0.380182;SGB=18.4989;VDB=0.679585;EFF=INTRON(MODIFIER||||547|LOC_Os07g06710|protein_coding|CODING|LOC_Os07g06710.1|4|1) FN-202.SNP.7:3281463 chr07:003281463 0 W/3281463-3281463 FN-202 Single Base Substitution G-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2485.SNP.7:3287861 chr07:003287861 0 W/3287861-3287861 FN2485 SNP G -> A AC=1;AN=200;BQB=0.999828;DP=3828;DP4=2235,1381,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.23838e-12;MQSB=0.917098;RPB=0.639609;SGB=69.1109;VDB=0.304549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.7:3294345 chr07:003294345 0 W/3294345-3294345 FN-74 Single Base Substitution C-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3580-S.SNP.7:3302886 chr07:003302886 0 W/3302886-3302886 FN3580-S SNP G -> A AC=1;AN=188;BQB=0.830472;DP=2816;DP4=1293,1332,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.11755e-07;MQSB=0.746179;RPB=0.951931;SGB=67.1521;VDB=0.253463;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.7:3318746 chr07:003318746 0 W/3318746-3318746 FN988-S Single Base Substitution T-G INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-216.SNP.7:3319844 chr07:003319844 0 W/3319844-3319844 FN-216 Single Base Substitution C-T INTRON HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN779-S.SNP.7:3320743 chr07:003320743 0 W/3320743-3320743 FN779-S Single Base Substitution G-A INTRON HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1048-S.SNP.7:3326238 chr07:003326238 0 W/3326238-3326238 FN1048-S Single Base Substitution C-G INTRON HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN702-S.SNP.7:3330390 chr07:003330390 0 W/3330390-3330390 FN702-S Single Base Substitution C-T INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2113-S.SNP.7:3331593 chr07:003331593 0 W/3331593-3331593 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.0523944;DP=3531;DP4=1500,1913,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30899e-06;MQSB=0.496734;RPB=0.532527;SGB=-328.596;VDB=0.308546;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.7:3348859 chr07:003348859 0 W/3348859-3348859 FN3505-S SNP T -> C AC=2;AN=188;BQB=0.99334;DP=2677;DP4=1364,1236,9,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.95712e-10;MQSB=0.992346;RPB=0.797931;SGB=71.6954;VDB=0.0986882;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.7:3349987 chr07:003349987 0 W/3349987-3349987 FN2492 SNP G -> A AC=1;AN=200;BQB=0.853777;DP=4389;DP4=2032,2061,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38699e-10;MQSB=0.967458;RPB=0.999325;SGB=26.8797;VDB=0.159485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.7:3349993 chr07:003349993 0 W/3349993-3349993 FN2492 SNP G -> T AC=1;AN=200;BQB=0.999888;DP=4396;DP4=2008,2077,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.04406e-12;MQSB=0.911165;RPB=0.46635;SGB=54.6902;VDB=0.187368;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.7:3353902 chr07:003353902 0 W/3353902-3353902 FN959-S Single Base Substitution A-G INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN948-S.SNP.7:3355253 chr07:003355253 0 W/3355253-3355253 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN-306.SNP.7:3356945 chr07:003356945 0 W/3356945-3356945 FN-306 Single Base Substitution A-T INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN3863-S.SNP.7:3359898 chr07:003359898 0 W/3359898-3359898 FN3863-S SNP A -> C AC=1;AN=158;BQB=0.878331;DP=2395;DP4=1117,1192,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=5.68328e-06;MQSB=0.999578;RPB=0.269941;SGB=42.6978;VDB=0.230033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.7:3362328 chr07:003362328 0 W/3362328-3362328 FN2631-S SNP G -> C AC=2;AN=200;BQB=0.934614;DP=5365;DP4=2467,2547,39,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.7379e-40;MQSB=0.915044;RPB=0.430781;SGB=307.549;VDB=0.977944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.7:3363180 chr07:003363180 0 W/3363180-3363180 FN3924-S SNP G -> T AC=1;AN=158;BQB=0.997994;DP=2595;DP4=1325,1144,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.67923e-08;MQSB=0.880907;RPB=0.992601;SGB=60.1755;VDB=0.911024;EFF=UTR_3_PRIME(MODIFIER||4467||251|LOC_Os07g06890|protein_coding|CODING|LOC_Os07g06890.1|17|1) FN2666-S.SNP.7:3366552 chr07:003366552 0 W/3366552-3366552 FN2666-S SNP A -> T AC=2;AN=200;BQB=0.0854617;DP=4449;DP4=2147,2079,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21623e-23;MQSB=0.895419;RPB=0.796998;SGB=94.6142;VDB=0.131541;EFF=INTRON(MODIFIER||||251|LOC_Os07g06890|protein_coding|CODING|LOC_Os07g06890.1|11|1) FN3690-S.SNP.7:3367823 chr07:003367823 0 W/3367823-3367823 FN3690-S SNP A -> T AC=2;AN=190;BQB=0.961905;DP=2837;DP4=1480,1229,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.69344e-13;MQSB=0.868761;RPB=0.919272;SGB=19.6499;VDB=0.661587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L247Q|251|LOC_Os07g06890|protein_coding|CODING|LOC_Os07g06890.1|7|1) FN1538-S.SNP.7:3369605 chr07:003369605 0 W/3369605-3369605 FN1538-S Single Base Substitution T-G NON_SYNONYMOUS_CODING Homo LOC_Os07g06890 FAD-linked oxidoreductase protein, putative, expressed SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN4107-S.SNP.7:3374062 chr07:003374062 0 W/3374062-3374062 FN4107-S SNP C -> T AC=2;AN=182;BQB=0.877963;DP=2979;DP4=1546,1360,10,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.14571e-10;MQSB=0.99;RPB=0.745548;SGB=66.6657;VDB=0.631268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D156N|515|LOC_Os07g06900|protein_coding|CODING|LOC_Os07g06900.1|2|1) FN3639-S.SNP.7:3377017 chr07:003377017 0 W/3377017-3377017 FN3639-S SNP C -> T AC=1;AN=190;BQB=0.850447;DP=3121;DP4=1609,1419,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.65471e-08;MQSB=0.737499;RPB=0.60204;SGB=28.7675;VDB=0.226216;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.7:3383770 chr07:003383770 0 W/3383770-3383770 FN887-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g06920 retrotransposon protein, putative, Ty1-copia subclass SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN1537-S.SNP.7:3396541 chr07:003396541 0 W/3396541-3396541 FN1537-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g06940 valyl-tRNA synthetase, putative, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1287-S.SNP.7:3407109 chr07:003407109 0 W/3407109-3407109 FN1287-S Single Base Substitution C-G INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3628-S.SNP.7:3407124 chr07:003407124 0 W/3407124-3407124 FN3628-S SNP A -> T AC=1;AN=190;BQB=0.465701;DP=2724;DP4=1273,1327,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00128142;MQSB=0.967385;RPB=0.989323;SGB=39.9877;VDB=0.570414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.7:3415292 chr07:003415292 0 W/3415292-3415292 FN-336 Single Base Substitution G-T INTRON HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN3721-S.SNP.7:3424827 chr07:003424827 0 W/3424827-3424827 FN3721-S SNP A -> T AC=1;AN=190;BQB=0.719056;DP=2651;DP4=1182,1310,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53978e-07;MQSB=0.883957;RPB=0.70246;SGB=18.552;VDB=0.982866;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.7:3435585 chr07:003435585 0 W/3435585-3435585 FN865-S Single Base Substitution G-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2480.SNP.7:3439611 chr07:003439611 0 W/3439611-3439611 FN2480 SNP G -> A AC=2;AN=200;BQB=0.985047;DP=4024;DP4=1660,2041,18,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31914e-17;MQSB=0.996572;RPB=0.969937;SGB=35.1726;VDB=0.817068;EFF=INTRON(MODIFIER||||623|LOC_Os07g06980|protein_coding|CODING|LOC_Os07g06980.1|12|1),INTRON(MODIFIER||||536|LOC_Os07g06980|protein_coding|CODING|LOC_Os07g06980.2|12|1) FN957-S.SNP.7:3442882 chr07:003442882 0 W/3442882-3442882 FN957-S Single Base Substitution G-A INTRON HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2452.SNP.7:3445866 chr07:003445866 0 W/3445866-3445866 FN2452 SNP G -> A AC=2;AN=200;BQB=0.998776;DP=4995;DP4=2195,2461,21,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.35261e-25;MQSB=0.898082;RPB=0.795531;SGB=52.8295;VDB=0.696268;EFF=UTR_3_PRIME(MODIFIER||588||100|LOC_Os07g06990|protein_coding|CODING|LOC_Os07g06990.2|1|1),INTRON(MODIFIER||||141|LOC_Os07g06990|protein_coding|CODING|LOC_Os07g06990.1|1|1) FN2465.SNP.7:3461265 chr07:003461265 0 W/3461265-3461265 FN2465 SNP G -> T AC=1;AN=200;BQB=0.999665;DP=4942;DP4=2271,2455,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.48275e-08;MQSB=0.963158;RPB=0.0289539;SGB=49.6594;VDB=0.790974;EFF=INTRON(MODIFIER||||202|LOC_Os07g07020|protein_coding|CODING|LOC_Os07g07020.1|3|1),INTRON(MODIFIER||||252|LOC_Os07g07020|protein_coding|CODING|LOC_Os07g07020.2|3|1) FN-192.SNP.7:3463646 chr07:003463646 0 W/3463646-3463646 FN-192 Single Base Substitution T-C INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2788-S.SNP.7:3464667 chr07:003464667 0 W/3464667-3464667 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.999923;DP=4010;DP4=1853,1864,12,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.78351e-11;MQSB=0.207996;RPB=0.388805;SGB=26.8957;VDB=0.886126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.7:3486924 chr07:003486924 0 W/3486924-3486924 FN2468 SNP T -> C AC=1;AN=200;BQB=0.942307;DP=3547;DP4=1282,1303,17,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20633e-08;MQSB=0.789218;RPB=0.372462;SGB=-117.09;VDB=0.045029;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S785G|1037|LOC_Os07g07070|protein_coding|CODING|LOC_Os07g07070.1|1|1) FN3383-S.SNP.7:3488335 chr07:003488335 0 W/3488335-3488335 FN3383-S SNP C -> A AC=2;AN=184;BQB=0.999987;DP=3356;DP4=1750,1441,22,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.19951e-18;MQSB=0.820546;RPB=0.845024;SGB=157.265;VDB=0.214535;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T314|1037|LOC_Os07g07070|protein_coding|CODING|LOC_Os07g07070.1|1|1) FN3792-S.SNP.7:3494647 chr07:003494647 0 W/3494647-3494647 FN3792-S SNP A -> T AC=2;AN=190;BQB=0.85161;DP=2573;DP4=1134,1283,7,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.353e-08;MQSB=0.999757;RPB=0.96123;SGB=53.6492;VDB=0.624468;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L633M|1073|LOC_Os07g07080|protein_coding|CODING|LOC_Os07g07080.1|10|1) FN3837-S.SNP.7:3512330 chr07:003512330 0 W/3512330-3512330 FN3837-S SNP C -> T AC=2;AN=190;BQB=0.995431;DP=2770;DP4=1332,1341,12,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.07241e-09;MQSB=0.671256;RPB=0.439639;SGB=71.8647;VDB=0.306219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.7:3519047 chr07:003519047 0 W/3519047-3519047 FN3387-S SNP C -> A AC=1;AN=184;BQB=0.997352;DP=3296;DP4=1694,1538,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0100121;MQB=3.0597e-07;MQSB=0.439607;RPB=0.999995;SGB=66.8296;VDB=0.675537;EFF=INTRON(MODIFIER||||94|LOC_Os07g07130|protein_coding|CODING|LOC_Os07g07130.1|2|1) FN2093-S.SNP.7:3522279 chr07:003522279 0 W/3522279-3522279 FN2093-S SNP G -> A AC=1;AN=168;BQB=0.016583;DP=2528;DP4=1076,1390,21,13;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0189873;MQB=0.0112957;MQSB=0.00161574;RPB=0.935132;SGB=-162.179;VDB=0.815995;EFF=INTRON(MODIFIER||||94|LOC_Os07g07130|protein_coding|CODING|LOC_Os07g07130.1|2|1) FN1448-S.SNP.7:3523889 chr07:003523889 0 W/3523889-3523889 FN1448-S Single Base Substitution G-A INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN4010-S.SNP.7:3529313 chr07:003529313 0 W/3529313-3529313 FN4010-S SNP A -> T AC=2;AN=168;BQB=0.848781;DP=2729;DP4=1358,1258,12,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.59352e-14;MQSB=0.997154;RPB=0.00379888;SGB=82.7794;VDB=0.236156;EFF=INTRON(MODIFIER||||172|LOC_Os07g07140|protein_coding|CODING|LOC_Os07g07140.1|2|1) FN4032-S.SNP.7:3532492 chr07:003532492 0 W/3532492-3532492 FN4032-S SNP C -> T AC=2;AN=168;BQB=0.873971;DP=2985;DP4=1244,1578,21,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.34231e-22;MQSB=0.940285;RPB=0.893839;SGB=211.682;VDB=0.720772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.7:3543856 chr07:003543856 0 W/3543856-3543856 FN2412 SNP C -> A AC=2;AN=200;BQB=0.176619;DP=4674;DP4=2325,2065,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.62283e-21;MQSB=0.996372;RPB=0.999847;SGB=46.4088;VDB=0.745099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.7:3545504 chr07:003545504 0 W/3545504-3545504 FN3779-S SNP A -> T AC=1;AN=190;BQB=0.9609;DP=2409;DP4=1226,1128,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.25307e-06;MQSB=0.786876;RPB=0.581887;SGB=21.8853;VDB=0.54263;EFF=INTRON(MODIFIER||||135|LOC_Os07g07160|protein_coding|CODING|LOC_Os07g07160.1|1|1) FN-374.SNP.7:3546968 chr07:003546968 0 W/3546968-3546968 FN-374 Single Base Substitution A-T INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2470.SNP.7:3549738 chr07:003549738 0 W/3549738-3549738 FN2470 SNP C -> T AC=1;AN=200;BQB=0.77059;DP=4845;DP4=2152,2303,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.82918e-16;MQSB=0.822005;RPB=0.979541;SGB=55.5366;VDB=0.902729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.7:3549824 chr07:003549824 0 W/3549824-3549824 FN1323-S Single Base Substitution C-T INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1643-S.SNP.7:3566915 chr07:003566915 0 W/3566915-3566915 FN1643-S Single Base Substitution A-T INTRON HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN917-S.SNP.7:3568292 chr07:003568292 0 W/3568292-3568292 FN917-S Single Base Substitution A-T INTRON HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN-332.SNP.7:3572726 chr07:003572726 0 W/3572726-3572726 FN-332 Single Base Substitution G-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3787-S.SNP.7:3581474 chr07:003581474 0 W/3581474-3581474 FN3787-S SNP C -> G AC=1;AN=190;BQB=0.973472;DP=2584;DP4=1340,1159,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20151e-06;MQSB=0.778837;RPB=0.768326;SGB=32.5467;VDB=0.744802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.7:3581881 chr07:003581881 0 W/3581881-3581881 FN3448-S SNP G -> T AC=1;AN=184;BQB=0.965689;DP=2676;DP4=1382,1200,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.90435e-07;MQSB=0.375902;RPB=0.991106;SGB=48.7425;VDB=0.0907782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.7:3592566 chr07:003592566 0 W/3592566-3592566 FN2655-S SNP C -> G AC=1;AN=200;BQB=0.974076;DP=4941;DP4=2488,2197,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.70454e-14;MQSB=0.861201;RPB=0.97505;SGB=15.9106;VDB=0.514769;EFF=INTRON(MODIFIER||||152|LOC_Os07g07240|protein_coding|CODING|LOC_Os07g07240.1|2|1),INTRON(MODIFIER||||152|LOC_Os07g07240|protein_coding|CODING|LOC_Os07g07240.2|2|1) FN2667-S.SNP.7:3592723 chr07:003592723 0 W/3592723-3592723 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.97842;DP=4931;DP4=2296,2403,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.64575e-10;MQSB=0.990998;RPB=0.990616;SGB=29.4849;VDB=0.0686815;EFF=INTRON(MODIFIER||||152|LOC_Os07g07240|protein_coding|CODING|LOC_Os07g07240.1|2|1),INTRON(MODIFIER||||152|LOC_Os07g07240|protein_coding|CODING|LOC_Os07g07240.2|2|1) FN2639-S.SNP.7:3594297 chr07:003594297 0 W/3594297-3594297 FN2639-S SNP G -> T AC=2;AN=200;BQB=0.815593;DP=4801;DP4=1912,2616,28,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.55341e-36;MQSB=0.357309;RPB=0.425392;SGB=220.528;VDB=0.80048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.7:3602334 chr07:003602334 0 W/3602334-3602334 FN2106-S SNP A -> G AC=2;AN=168;BQB=0.510231;DP=4167;DP4=2076,2016,34,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44169e-29;MQSB=0.960161;RPB=0.985388;SGB=-121.42;VDB=0.961202;EFF=INTRON(MODIFIER||||735|LOC_Os07g07260|protein_coding|CODING|LOC_Os07g07260.1|2|1),INTRON(MODIFIER||||628|LOC_Os07g07260|protein_coding|CODING|LOC_Os07g07260.2|2|1) FN505-S.SNP.7:3602334 chr07:003602334 0 W/3602334-3602334 FN505-S Single Base Substitution A-G INTRON HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN3388-S.SNP.7:3608143 chr07:003608143 0 W/3608143-3608143 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.984219;DP=3134;DP4=1424,1597,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.56659e-08;MQSB=0.99639;RPB=0.674846;SGB=48.7425;VDB=0.703185;EFF=INTRON(MODIFIER||||735|LOC_Os07g07260|protein_coding|CODING|LOC_Os07g07260.1|8|1),INTRON(MODIFIER||||628|LOC_Os07g07260|protein_coding|CODING|LOC_Os07g07260.2|8|1) FN2331.SNP.7:3614196 chr07:003614196 0 W/3614196-3614196 FN2331 SNP C -> T AC=2;AN=192;BQB=0.994421;DP=4467;DP4=2275,1733,31,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000447728;MQB=8.43431e-29;MQSB=0.248744;RPB=0.981823;SGB=185.918;VDB=0.627967;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V37|424|LOC_Os07g07270|protein_coding|CODING|LOC_Os07g07270.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V37|371|LOC_Os07g07270|protein_coding|CODING|LOC_Os07g07270.2|1|1) FN2491.SNP.7:3617178 chr07:003617178 0 W/3617178-3617178 FN2491 SNP C -> G AC=2;AN=200;BQB=0.767676;DP=4753;DP4=2385,2099,20,18;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.71749e-11;MQSB=0.991224;RPB=0.628126;SGB=126.794;VDB=0.720557;EFF=INTRON(MODIFIER||||115|LOC_Os07g07280|protein_coding|CODING|LOC_Os07g07280.1|2|1) FN692-S.SNP.7:3623912 chr07:003623912 0 W/3623912-3623912 FN692-S Single Base Substitution C-A INTRON HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-170.SNP.7:3626375 chr07:003626375 0 W/3626375-3626375 FN-170 Single Base Substitution A-G INTRON HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3828-S.SNP.7:3631966 chr07:003631966 0 W/3631966-3631966 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.997847;DP=3127;DP4=1560,1450,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98676e-12;MQSB=0.900256;RPB=0.992705;SGB=108.296;VDB=0.795056;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.7:3637930 chr07:003637930 0 W/3637930-3637930 FN445-S Single Base Substitution G-T INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN4203-S.SNP.7:3638529 chr07:003638529 0 W/3638529-3638529 FN4203-S SNP G -> A AC=2;AN=170;BQB=0.95509;DP=634;DP4=506,28,9,0;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=0.00039302;MQSB=8.50722e-08;RPB=0.9152;SGB=32.5515;VDB=0.462804;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.7:3641913 chr07:003641913 0 W/3641913-3641913 FN555-S Single Base Substitution G-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN75-S-43.SNP.7:3645069 chr07:003645069 0 W/3645069-3645069 FN75-S-43 SNP T -> A AC=1;AN=190;BQB=0.183127;DP=4897;DP4=2179,2369,18,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.96124e-18;MQSB=0.642919;RPB=0.949817;SGB=33.6348;VDB=0.703391;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.7:3651175 chr07:003651175 0 W/3651175-3651175 FN836-S Single Base Substitution G-A INTRON HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2438.SNP.7:3663345 chr07:003663345 0 W/3663345-3663345 FN2438 SNP C -> T AC=1;AN=200;BQB=0.939188;DP=4064;DP4=1960,1845,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000246063;MQB=3.7077e-07;MQSB=0.701382;RPB=0.936471;SGB=29.4541;VDB=0.0954367;EFF=UTR_3_PRIME(MODIFIER||228||235|LOC_Os07g07320|protein_coding|CODING|LOC_Os07g07320.1|1|1) FN-208.SNP.7:3664370 chr07:003664370 0 W/3664370-3664370 FN-208 Single Base Substitution T-C INTERGENIC HOMO SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3805-S.SNP.7:3667985 chr07:003667985 0 W/3667985-3667985 FN3805-S SNP A -> G AC=1;AN=190;BQB=0.92812;DP=2835;DP4=1532,1171,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14001e-06;MQSB=0.880018;RPB=0.990809;SGB=39.9877;VDB=0.324775;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.7:3668453 chr07:003668453 0 W/3668453-3668453 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3880-S.SNP.7:3671859 chr07:003671859 0 W/3671859-3671859 FN3880-S SNP G -> T AC=1;AN=158;BQB=0.751675;DP=2054;DP4=999,931,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.71447e-06;MQSB=0.855214;RPB=0.666864;SGB=38.3284;VDB=0.167265;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q450H|479|LOC_Os07g07340|protein_coding|CODING|LOC_Os07g07340.1|2|1) FN2582-S.SNP.7:3674497 chr07:003674497 0 W/3674497-3674497 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.914949;DP=4500;DP4=2155,2178,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.71219e-06;MQSB=0.932836;RPB=0.582216;SGB=22.1736;VDB=0.382586;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.7:3686008 chr07:003686008 0 W/3686008-3686008 FN3826-S SNP C -> A AC=1;AN=190;BQB=0.879597;DP=3164;DP4=1483,1539,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.22736e-05;MQSB=0.000865228;RPB=0.783905;SGB=44.5415;VDB=0.753144;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.7:3690298 chr07:003690298 0 W/3690298-3690298 FN989-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN4113-S.SNP.7:3691327 chr07:003691327 0 W/3691327-3691327 FN4113-S SNP C -> G AC=1;AN=182;BQB=0.989369;DP=2979;DP4=1318,1568,19,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.30429e-22;MQSB=0.832458;RPB=0.875291;SGB=35.3668;VDB=0.975234;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V118|382|LOC_Os07g07390|protein_coding|CODING|LOC_Os07g07390.1|2|1) FN1307-S.SNP.7:3697820 chr07:003697820 0 W/3697820-3697820 FN1307-S Single Base Substitution G-A INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN750-S.SNP.7:3704488 chr07:003704488 0 W/3704488-3704488 FN750-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g07420 gibberellin 20 oxidase 1-B, putative, expressed SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2559-S.SNP.7:3706119 chr07:003706119 0 W/3706119-3706119 FN2559-S SNP T -> A AC=2;AN=198;BQB=0.989985;DP=4261;DP4=2055,1993,16,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.13791e-17;MQSB=0.966099;RPB=0.810471;SGB=86.8856;VDB=0.758155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.7:3711826 chr07:003711826 0 W/3711826-3711826 FN2494 SNP C -> T AC=1;AN=200;BQB=0.383361;DP=4528;DP4=2138,2164,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25093e-12;MQSB=0.939955;RPB=0.0076767;SGB=12.7003;VDB=0.115187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.7:3722437 chr07:003722437 0 W/3722437-3722437 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.815805;DP=3603;DP4=1704,1594,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000277546;MQB=5.99479e-06;MQSB=0.827023;RPB=0.941064;SGB=54.144;VDB=0.997806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A38T|370|LOC_Os07g07470|protein_coding|CODING|LOC_Os07g07470.1|1|1) FN464-S.SNP.7:3724126 chr07:003724126 0 W/3724126-3724126 FN464-S Single Base Substitution A-G INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN2451.SNP.7:3736671 chr07:003736671 0 W/3736671-3736671 FN2451 SNP C -> T AC=1;AN=200;BQB=0.823801;DP=4495;DP4=2209,2001,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222469;MQB=2.37091e-16;MQSB=0.618454;RPB=0.96525;SGB=137.158;VDB=0.846338;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.7:3740678 chr07:003740678 0 W/3740678-3740678 FN978-S Single Base Substitution C-T INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. W577-3-1.SNP.7:3742117 chr07:003742117 0 W/3742117-3742117 W577-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2243-S.SNP.7:3744454 chr07:003744454 0 W/3744454-3744454 FN2243-S SNP C -> T AC=1;AN=190;BQB=0.743625;DP=4407;DP4=2131,2033,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07781e-06;MQSB=0.896955;RPB=0.680208;SGB=44.5415;VDB=0.439026;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.7:3745279 chr07:003745279 0 W/3745279-3745279 FN514-S Single Base Substitution G-T INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2166-S.SNP.7:3753480 chr07:003753480 0 W/3753480-3753480 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.997752;DP=4024;DP4=2217,1760,11,19;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.32207e-09;MQSB=1.191e-05;RPB=0.968951;SGB=24.2221;VDB=0.989117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.7:3755728 chr07:003755728 0 W/3755728-3755728 FN2295 SNP C -> T AC=1;AN=192;BQB=0.957035;DP=5096;DP4=2415,2363,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.24337e-12;MQSB=0.909432;RPB=0.998246;SGB=81.1609;VDB=0.230246;EFF=UTR_3_PRIME(MODIFIER||674||183|LOC_Os07g07530|protein_coding|CODING|LOC_Os07g07530.1|1|1) FN672-S.SNP.7:3756915 chr07:003756915 0 W/3756915-3756915 FN672-S Single Base Substitution A-T INTRON HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1140-S.SNP.7:3760530 chr07:003760530 0 W/3760530-3760530 FN1140-S Single Base Substitution A-G INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-132.SNP.7:3765836 chr07:003765836 0 W/3765836-3765836 FN-132 Single Base Substitution C-T INTRON HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. N1-169-3.SNP.7:3766792 chr07:003766792 0 W/3766792-3766792 N1-169-3 Single Base Substitution A-G INTERGENIC Homo SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. FN775-S.SNP.7:3771543 chr07:003771543 0 W/3771543-3771543 FN775-S Single Base Substitution C-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3356-S.SNP.7:3784443 chr07:003784443 0 W/3784443-3784443 FN3356-S SNP T -> C AC=2;AN=184;BQB=0.876947;DP=2911;DP4=1102,1680,14,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.01619e-17;MQSB=0.923081;RPB=0.628567;SGB=34.1945;VDB=0.494902;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.7:3788853 chr07:003788853 0 W/3788853-3788853 FN527-S Single Base Substitution C-T INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2395.SNP.7:3793216 chr07:003793216 0 W/3793216-3793216 FN2395 SNP A -> T AC=2;AN=200;BQB=0.448549;DP=4476;DP4=1923,2236,25,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.85303e-28;MQSB=0.99993;RPB=0.12798;SGB=188.082;VDB=0.960883;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.7:3797610 chr07:003797610 0 W/3797610-3797610 FN945-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g07580 ROOT HAIRLESS 1, putative, expressed SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2330.SNP.7:3800755 chr07:003800755 0 W/3800755-3800755 FN2330 SNP T -> G AC=2;AN=192;BQB=0.645135;DP=5054;DP4=2383,2185,37,28;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=7.16075e-26;MQSB=0.015491;RPB=0.904828;SGB=221.562;VDB=0.753685;EFF=UTR_3_PRIME(MODIFIER||1140||367|LOC_Os07g07580|protein_coding|CODING|LOC_Os07g07580.2|10|1),UTR_3_PRIME(MODIFIER||378||394|LOC_Os07g07580|protein_coding|CODING|LOC_Os07g07580.1|11|1),UTR_3_PRIME(MODIFIER||378||395|LOC_Os07g07580|protein_coding|CODING|LOC_Os07g07580.3|11|1) FN1423-S.SNP.7:3805511 chr07:003805511 0 W/3805511-3805511 FN1423-S Single Base Substitution C-T INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3302-S.SNP.7:3814594 chr07:003814594 0 W/3814594-3814594 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.963167;DP=2738;DP4=1394,1242,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.62052e-07;MQSB=0.988165;RPB=0.792849;SGB=44.2207;VDB=0.0214034;EFF=INTRON(MODIFIER||||120|LOC_Os07g07610|protein_coding|CODING|LOC_Os07g07610.1|5|1) FN3902-S.SNP.7:3819081 chr07:003819081 0 W/3819081-3819081 FN3902-S SNP G -> T AC=1;AN=158;BQB=0.327446;DP=2248;DP4=1069,1103,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.40068e-06;MQSB=0.998311;RPB=0.839544;SGB=40.8124;VDB=0.488567;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G546|872|LOC_Os07g07620|protein_coding|CODING|LOC_Os07g07620.1|1|1) FN-328.SNP.7:3836228 chr07:003836228 0 W/3836228-3836228 FN-328 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g07654 BT1 family protein, putative, expressed SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2116-S.SNP.7:3841737 chr07:003841737 0 W/3841737-3841737 FN2116-S SNP T -> A AC=1;AN=168;BQB=0.990132;DP=4115;DP4=2172,1894,20,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=3.65958e-08;MQSB=0.0107864;RPB=0.917302;SGB=61.0778;VDB=0.357325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.7:3852334 chr07:003852334 0 W/3852334-3852334 FN1686-S SNP T -> G AC=1;AN=188;BQB=0.980009;DP=4049;DP4=1982,2023,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23768e-14;MQSB=0.999041;RPB=0.680199;SGB=22.5144;VDB=0.376181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.7:3856976 chr07:003856976 0 W/3856976-3856976 FN1610-S Single Base Substitution T-C INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN756-S.SNP.7:3948099 chr07:003948099 0 W/3948099-3948099 FN756-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN1351-S.SNP.7:3950225 chr07:003950225 0 W/3950225-3950225 FN1351-S Single Base Substitution A-G INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN2537-S.SNP.7:3951846 chr07:003951846 0 W/3951846-3951846 FN2537-S SNP A -> C AC=2;AN=198;BQB=0.814801;DP=4390;DP4=1784,2214,15,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.7186e-21;MQSB=0.367054;RPB=0.967571;SGB=46.0372;VDB=0.513359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.7:3954807 chr07:003954807 0 W/3954807-3954807 FN2370 SNP C -> G AC=1;AN=192;BQB=0.995267;DP=4523;DP4=1910,2312,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.00604e-07;MQSB=0.0623734;RPB=0.912799;SGB=39.78;VDB=0.867348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E30Q|441|LOC_Os07g07880|protein_coding|CODING|LOC_Os07g07880.1|1|1) FN1745-S.SNP.7:3961427 chr07:003961427 0 W/3961427-3961427 FN1745-S SNP A -> T AC=1;AN=188;BQB=0.999814;DP=3428;DP4=1685,1695,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0;MQB=0.16977;MQSB=0.000143901;RPB=0.294078;SGB=18.4463;VDB=0.0187886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.7:3967745 chr07:003967745 0 W/3967745-3967745 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.926917;DP=3312;DP4=1553,1683,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=8.4132e-05;MQSB=0.838394;RPB=0.904799;SGB=35.3493;VDB=0.799646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.7:3977917 chr07:003977917 0 W/3977917-3977917 FN-222 Single Base Substitution G-T INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3464-S.SNP.7:3980232 chr07:003980232 0 W/3980232-3980232 FN3464-S SNP C -> G AC=1;AN=184;BQB=0.721755;DP=2474;DP4=1995,429,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38744e-06;MQSB=0.333797;RPB=0.738335;SGB=10.6662;VDB=0.118721;EFF=START_GAINED(LOW||||170|LOC_Os07g07930|protein_coding|CODING|LOC_Os07g07930.1|1|1),UTR_5_PRIME(MODIFIER||73||170|LOC_Os07g07930|protein_coding|CODING|LOC_Os07g07930.1|1|1) FN3364-S.SNP.7:3987355 chr07:003987355 0 W/3987355-3987355 FN3364-S SNP T -> A AC=2;AN=184;BQB=0.850459;DP=3468;DP4=1739,1622,23,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.14603e-20;MQSB=0.888142;RPB=0.94023;SGB=113.227;VDB=0.618976;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.7:3988063 chr07:003988063 0 W/3988063-3988063 FN1650-S Single Base Substitution A-T INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN887-S.SNP.7:3998447 chr07:003998447 0 W/3998447-3998447 FN887-S Single Base Substitution A-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2599-S.SNP.7:3999900 chr07:003999900 0 W/3999900-3999900 FN2599-S SNP C -> T AC=2;AN=198;BQB=0.11417;DP=4307;DP4=2155,1814,32,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.66952e-30;MQSB=0.768717;RPB=0.937392;SGB=-50.4064;VDB=0.792799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.7:4003677 chr07:004003677 0 W/4003677-4003677 FN1372-S Single Base Substitution G-A INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1499-S.SNP.7:4004008 chr07:004004008 0 W/4004008-4004008 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN_846-8-1.SNP.7:4005988 chr07:004005988 0 W/4005988-4005988 FN_846-8-1 Single Base Substitution C-T Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2081-S.SNP.7:4011358 chr07:004011358 0 W/4011358-4011358 FN2081-S SNP C -> A AC=1;AN=168;BQB=0.00374758;DP=2656;DP4=1056,1566,3,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.42943e-05;MQSB=0.93513;RPB=0.898257;SGB=-82.6471;VDB=0.522833;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.7:4013879 chr07:004013879 0 W/4013879-4013879 FN881-S Single Base Substitution C-T INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-336.SNP.7:4018019 chr07:004018019 0 W/4018019-4018019 FN-336 Single Base Substitution A-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN-336.SNP.7:4018020 chr07:004018020 0 W/4018020-4018020 FN-336 Single Base Substitution A-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2422.SNP.7:4022630 chr07:004022630 0 W/4022630-4022630 FN2422 SNP C -> T AC=1;AN=200;BQB=0.687233;DP=4192;DP4=2315,1556,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023855;MQB=1.62799e-11;MQSB=0.988555;RPB=0.826395;SGB=-8.87404;VDB=0.687395;EFF=INTRON(MODIFIER||||782|LOC_Os07g07974|protein_coding|CODING|LOC_Os07g07974.1|1|1) FN1064-S.SNP.7:4036735 chr07:004036735 0 W/4036735-4036735 FN1064-S Single Base Substitution T-C INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN666-S.SNP.7:4047211 chr07:004047211 0 W/4047211-4047211 FN666-S Single Base Substitution C-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN1523-S.SNP.7:4047412 chr07:004047412 0 W/4047412-4047412 FN1523-S Single Base Substitution G-A INTERGENIC Homo SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1198-S.SNP.7:4054391 chr07:004054391 0 W/4054391-4054391 FN1198-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN702-S.SNP.7:4063314 chr07:004063314 0 W/4063314-4063314 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3292-S.SNP.7:4064086 chr07:004064086 0 W/4064086-4064086 FN3292-S SNP A -> C AC=1;AN=184;BQB=0.974183;DP=3746;DP4=2024,1598,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43108e-13;MQSB=0.981749;RPB=0.961433;SGB=-10.5397;VDB=0.64029;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.7:4068963 chr07:004068963 0 W/4068963-4068963 FN4103-S SNP G -> A AC=2;AN=182;BQB=0.823797;DP=2748;DP4=1391,1285,9,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.07567e-08;MQSB=0.999904;RPB=0.961205;SGB=66.6657;VDB=0.915758;EFF=INTRON(MODIFIER||||280|LOC_Os07g08030|protein_coding|CODING|LOC_Os07g08030.1|1|1) FN3362-S.SNP.7:4070408 chr07:004070408 0 W/4070408-4070408 FN3362-S SNP C -> A AC=2;AN=184;BQB=0.926886;DP=2293;DP4=941,1224,7,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.52662e-15;MQSB=0.992789;RPB=0.997162;SGB=78.0093;VDB=0.476075;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.7:4070881 chr07:004070881 0 W/4070881-4070881 FN596-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g08040 expressed protein SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN-363.SNP.7:4071314 chr07:004071314 0 W/4071314-4071314 FN-363 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g08040 expressed protein SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1236-S.SNP.7:4084882 chr07:004084882 0 W/4084882-4084882 FN1236-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2372.SNP.7:4090348 chr07:004090348 0 W/4090348-4090348 FN2372 SNP A -> G AC=1;AN=192;BQB=0.706992;DP=5197;DP4=2336,2622,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.0868e-11;MQSB=0.999846;RPB=0.996264;SGB=61.1661;VDB=0.470238;EFF=INTRON(MODIFIER||||244|LOC_Os07g08070|protein_coding|CODING|LOC_Os07g08070.1|2|1) FN4221-S.SNP.7:4097169 chr07:004097169 0 W/4097169-4097169 FN4221-S SNP A -> G AC=1;AN=170;BQB=0.995391;DP=2479;DP4=1167,1249,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.14231e-08;MQSB=0.991246;RPB=0.653011;SGB=41.7633;VDB=0.684414;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.7:4099749 chr07:004099749 0 W/4099749-4099749 W502-3-4 Single Base Substitution C-T INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN4109-S.SNP.7:4103219 chr07:004103219 0 W/4103219-4103219 FN4109-S SNP C -> A AC=1;AN=182;BQB=0.906942;DP=3186;DP4=1434,1664,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.06626e-08;MQSB=0.553304;RPB=0.972953;SGB=71.1765;VDB=0.572828;EFF=INTRON(MODIFIER||||428|LOC_Os07g08090|protein_coding|CODING|LOC_Os07g08090.1|3|1) FN2320.SNP.7:4117770 chr07:004117770 0 W/4117770-4117770 FN2320 SNP G -> A AC=1;AN=192;BQB=0.708287;DP=5114;DP4=2273,2416,10,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.36794e-17;MQSB=0.43463;RPB=0.813567;SGB=59.6861;VDB=0.630979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.7:4126444 chr07:004126444 0 W/4126444-4126444 FN3505-S SNP G -> A AC=2;AN=188;BQB=0.999904;DP=2891;DP4=1467,1347,22,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.75288e-20;MQSB=0.778686;RPB=0.708464;SGB=139.845;VDB=0.237046;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.7:4129111 chr07:004129111 0 W/4129111-4129111 FN-370 Single Base Substitution C-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-85.SNP.7:4130870 chr07:004130870 0 W/4130870-4130870 FN-85 Single Base Substitution C-G INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-167.SNP.7:4130929 chr07:004130929 0 W/4130929-4130929 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1123-S.SNP.7:4131410 chr07:004131410 0 W/4131410-4131410 FN1123-S Single Base Substitution G-A INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN3475-S.SNP.7:4132201 chr07:004132201 0 W/4132201-4132201 FN3475-S SNP G -> A AC=1;AN=184;BQB=0.889951;DP=2404;DP4=1511,688,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000415973;MQB=0.000212187;MQSB=6.37007e-17;RPB=0.838281;SGB=48.7425;VDB=0.87837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1515-S.SNP.7:4133317 chr07:004133317 0 W/4133317-4133317 FN1515-S Single Base Substitution T-C INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN3940-S.SNP.7:4140592 chr07:004140592 0 W/4140592-4140592 FN3940-S SNP A -> G AC=2;AN=158;BQB=0.442079;DP=2322;DP4=1123,1115,9,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.19504e-07;MQSB=0.996185;RPB=0.98341;SGB=73.2838;VDB=0.880512;EFF=INTRON(MODIFIER||||372|LOC_Os07g08140|protein_coding|CODING|LOC_Os07g08140.1|1|1) FN3756-S.SNP.7:4143646 chr07:004143646 0 W/4143646-4143646 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.898544;DP=3397;DP4=1516,1741,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.86737e-06;MQSB=0.581993;RPB=0.562666;SGB=58.2031;VDB=0.478388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R30C|200|LOC_Os07g08150|protein_coding|CODING|LOC_Os07g08150.1|1|1) FN1410-S.SNP.7:4161965 chr07:004161965 0 W/4161965-4161965 FN1410-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4030-S.SNP.7:4164579 chr07:004164579 0 W/4164579-4164579 FN4030-S SNP T -> C AC=1;AN=168;BQB=0.904273;DP=2676;DP4=1153,1373,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.67255e-09;MQSB=0.946531;RPB=0.998397;SGB=58.7637;VDB=0.940103;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.7:4169436 chr07:004169436 0 W/4169436-4169436 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN1652-S.SNP.7:4169474 chr07:004169474 0 W/4169474-4169474 FN1652-S Single Base Substitution A-G INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN-289.SNP.7:4171634 chr07:004171634 0 W/4171634-4171634 FN-289 Single Base Substitution T-G INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN1577-S.SNP.7:4172822 chr07:004172822 0 W/4172822-4172822 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1577-S.SNP.7:4172823 chr07:004172823 0 W/4172823-4172823 FN1577-S Single Base Substitution T-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1577-S.SNP.7:4172824 chr07:004172824 0 W/4172824-4172824 FN1577-S Single Base Substitution A-C INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3769-S.SNP.7:4174818 chr07:004174818 0 W/4174818-4174818 FN3769-S SNP T -> C AC=1;AN=190;BQB=0.85241;DP=2300;DP4=1111,1101,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37053e-09;MQSB=0.998539;RPB=0.181212;SGB=26.2136;VDB=0.208725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.7:4188285 chr07:004188285 0 W/4188285-4188285 FN2584-S SNP A -> G AC=1;AN=198;BQB=0.259907;DP=4419;DP4=1946,2200,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.92272e-15;MQSB=0.994199;RPB=0.689888;SGB=79.6954;VDB=0.886587;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.7:4188872 chr07:004188872 0 W/4188872-4188872 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.996973;DP=2670;DP4=1246,1359,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.04356e-05;MQSB=0.996595;RPB=0.591727;SGB=35.3493;VDB=0.314028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.7:4200893 chr07:004200893 0 W/4200893-4200893 FN2715-S SNP T -> A AC=1;AN=200;BQB=0.89232;DP=4620;DP4=2298,2152,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.09352e-13;MQSB=0.940984;RPB=0.71934;SGB=19.1209;VDB=0.89369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y209N|299|LOC_Os07g08240|protein_coding|CODING|LOC_Os07g08240.1|6|1) FN2660-S.SNP.7:4210481 chr07:004210481 0 W/4210481-4210481 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.614945;DP=4821;DP4=2437,2103,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.81465e-06;MQSB=0.999385;RPB=0.796052;SGB=19.0642;VDB=0.988796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.7:4211655 chr07:004211655 0 W/4211655-4211655 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.995968;DP=4439;DP4=2121,2059,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.37972e-15;MQSB=0.890996;RPB=0.738554;SGB=-9.66994;VDB=0.517672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.7:4212733 chr07:004212733 0 W/4212733-4212733 FN3863-S SNP G -> A AC=1;AN=158;BQB=0.591735;DP=2863;DP4=1346,1431,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.49813e-07;MQSB=0.989291;RPB=0.911807;SGB=50.9207;VDB=0.148397;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q34|151|LOC_Os07g08260|protein_coding|CODING|LOC_Os07g08260.1|2|1) FN1764-S.SNP.7:4216204 chr07:004216204 0 W/4216204-4216204 FN1764-S SNP G -> A AC=2;AN=188;BQB=0.420939;DP=3245;DP4=1954,1231,20,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.66085e-11;MQSB=0.994431;RPB=0.183345;SGB=-184.54;VDB=0.78741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.7:4217096 chr07:004217096 0 W/4217096-4217096 FN1022-S Single Base Substitution A-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2378.SNP.7:4226226 chr07:004226226 0 W/4226226-4226226 FN2378 SNP A -> G AC=2;AN=192;BQB=0.969261;DP=5463;DP4=2468,2658,34,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.19895e-41;MQSB=0.993952;RPB=0.701094;SGB=172.517;VDB=0.207084;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.7:4230291 chr07:004230291 0 W/4230291-4230291 FN1257-S Single Base Substitution T-C INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3840-S.SNP.7:4236839 chr07:004236839 0 W/4236839-4236839 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.277824;DP=3212;DP4=1488,1629,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12229e-07;MQSB=0.999143;RPB=0.0167989;SGB=44.5415;VDB=0.0819331;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.7:4239555 chr07:004239555 0 W/4239555-4239555 FN1687-S SNP C -> T AC=1;AN=188;BQB=0.00231799;DP=3334;DP4=1606,1688,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.53699e-15;MQSB=0.99997;RPB=0.734325;SGB=-9.02352;VDB=0.872834;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.7:4242280 chr07:004242280 0 W/4242280-4242280 FN1257-S Single Base Substitution C-T INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN794-S.SNP.7:4254650 chr07:004254650 0 W/4254650-4254650 FN794-S Single Base Substitution G-A INTRON HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN3453-S.SNP.7:4257990 chr07:004257990 0 W/4257990-4257990 FN3453-S SNP A -> G AC=1;AN=184;BQB=0.998073;DP=2813;DP4=1409,1319,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05789e-06;MQSB=0.954294;RPB=0.992263;SGB=39.699;VDB=0.431287;EFF=INTRON(MODIFIER||||650|LOC_Os07g08320|protein_coding|CODING|LOC_Os07g08320.1|1|1) W464-2-1.SNP.7:4271042 chr07:004271042 0 W/4271042-4271042 W464-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g08340 pyruvate kinase, putative, expressed SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-342.SNP.7:4273251 chr07:004273251 0 W/4273251-4273251 FN-342 Single Base Substitution A-G INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN920-S.SNP.7:4273956 chr07:004273956 0 W/4273956-4273956 FN920-S Single Base Substitution A-G INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN920-S.SNP.7:4273958 chr07:004273958 0 W/4273958-4273958 FN920-S Single Base Substitution C-G INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN-149.SNP.7:4280835 chr07:004280835 0 W/4280835-4280835 FN-149 Single Base Substitution A-G INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1275-S.SNP.7:4280891 chr07:004280891 0 W/4280891-4280891 FN1275-S Single Base Substitution T-C INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2698-S.SNP.7:4283218 chr07:004283218 0 W/4283218-4283218 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.385264;DP=4876;DP4=1763,2808,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205086;MQB=7.11728e-09;MQSB=0.942846;RPB=0.762539;SGB=34.6953;VDB=0.721956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.7:4283338 chr07:004283338 0 W/4283338-4283338 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.939712;DP=5124;DP4=2550,2276,8,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.84352e-16;MQSB=0.883374;RPB=0.908376;SGB=58.1418;VDB=0.578045;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.7:4291157 chr07:004291157 0 W/4291157-4291157 FN808-S Single Base Substitution T-C INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN590-S.SNP.7:4294052 chr07:004294052 0 W/4294052-4294052 FN590-S Single Base Substitution A-G INTERGENIC HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1219-S.SNP.7:4308109 chr07:004308109 0 W/4308109-4308109 FN1219-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN-170.SNP.7:4321447 chr07:004321447 0 W/4321447-4321447 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. W426-1-1.SNP.7:4324345 chr07:004324345 0 W/4324345-4324345 W426-1-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g08420 bZIP transcription factor domain containing protein, expressed SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN2194-S.SNP.7:4329192 chr07:004329192 0 W/4329192-4329192 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.536057;DP=4817;DP4=2386,2097,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.05477e-19;MQSB=0.412099;RPB=0.624293;SGB=110.732;VDB=0.0471192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.7:4329907 chr07:004329907 0 W/4329907-4329907 FN1302-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN500-S.SNP.7:4332511 chr07:004332511 0 W/4332511-4332511 FN500-S Single Base Substitution T-C INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1442-S.SNP.7:4345132 chr07:004345132 0 W/4345132-4345132 FN1442-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3373-S.SNP.7:4347026 chr07:004347026 0 W/4347026-4347026 FN3373-S SNP T -> A AC=1;AN=184;BQB=0.941255;DP=2602;DP4=1356,1157,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00013e-06;MQSB=0.97209;RPB=0.90836;SGB=39.699;VDB=0.356497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.7:4347148 chr07:004347148 0 W/4347148-4347148 FN3825-S SNP C -> T AC=2;AN=190;BQB=0.995931;DP=2487;DP4=1240,1110,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.56229e-14;MQSB=0.999861;RPB=0.0641776;SGB=108.296;VDB=0.127452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.7:4354598 chr07:004354598 0 W/4354598-4354598 FN1323-S Single Base Substitution T-C INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN411-S.SNP.7:4358116 chr07:004358116 0 W/4358116-4358116 FN411-S Single Base Substitution G-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2291.SNP.7:4360272 chr07:004360272 0 W/4360272-4360272 FN2291 SNP G -> T AC=1;AN=192;BQB=0.620825;DP=4911;DP4=2383,2204,21,36;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.07927e-32;MQSB=0.820577;RPB=0.995971;SGB=131.488;VDB=0.985369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2291.SNP.7:4360273 chr07:004360273 0 W/4360273-4360273 FN2291 SNP C -> G AC=1;AN=192;BQB=0.997932;DP=4912;DP4=2402,2210,24,36;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.06938e-34;MQSB=0.918931;RPB=0.895712;SGB=139.181;VDB=0.943867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.7:4366236 chr07:004366236 0 W/4366236-4366236 FN1536-S Single Base Substitution A-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN931-S.SNP.7:4370126 chr07:004370126 0 W/4370126-4370126 FN931-S Single Base Substitution T-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2312.SNP.7:4387452 chr07:004387452 0 W/4387452-4387452 FN2312 SNP G -> T AC=1;AN=192;BQB=0.0388198;DP=5004;DP4=2428,2311,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00019984;MQB=1.25492e-07;MQSB=0.985311;RPB=0.802329;SGB=-0.466926;VDB=0.987171;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.7:4388109 chr07:004388109 0 W/4388109-4388109 W42-1-3S-1 Single Base Substitution A-T INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3600-S.SNP.7:4390529 chr07:004390529 0 W/4390529-4390529 FN3600-S SNP T -> C AC=2;AN=190;BQB=0.948425;DP=2948;DP4=1489,1309,18,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.28091e-11;MQSB=0.947169;RPB=0.466215;SGB=71.6393;VDB=0.912743;EFF=INTRON(MODIFIER||||377|LOC_Os07g08500|protein_coding|CODING|LOC_Os07g08500.1|4|1) FN-9.SNP.7:4393694 chr07:004393694 0 W/4393694-4393694 FN-9 Single Base Substitution T-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN-359.SNP.7:4394131 chr07:004394131 0 W/4394131-4394131 FN-359 Single Base Substitution G-A INTERGENIC HOMO SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1445-S.SNP.7:4395036 chr07:004395036 0 W/4395036-4395036 FN1445-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN939-S.SNP.7:4395036 chr07:004395036 0 W/4395036-4395036 FN939-S Single Base Substitution T-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN442-S.SNP.7:4408318 chr07:004408318 0 W/4408318-4408318 FN442-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g08540 auxin response factor 20, putative, expressed SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN3569-S.SNP.7:4411655 chr07:004411655 0 W/4411655-4411655 FN3569-S SNP A -> T AC=1;AN=188;BQB=0.850187;DP=4039;DP4=1722,2114,16,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38628e-16;MQSB=0.802654;RPB=0.409209;SGB=110.393;VDB=0.228975;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T37|147|LOC_Os07g08550|protein_coding|CODING|LOC_Os07g08550.1|1|1) 701-7.SNP.7:4412013 chr07:004412013 0 W/4412013-4412013 701-7 Single Base Substitution G-A INTERGENIC Homo SNo: 1441, Mutant_ID: 701-7, Generation: M2, Mutations: 28, Genes: 9, Seed availability: Yes. FN2408.SNP.7:4418951 chr07:004418951 0 W/4418951-4418951 FN2408 SNP G -> T AC=1;AN=200;BQB=0.566646;DP=3781;DP4=1958,1544,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53687e-07;MQSB=0.551713;RPB=0.400993;SGB=26.8797;VDB=0.874116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.7:4419406 chr07:004419406 0 W/4419406-4419406 FN3325-S SNP A -> T AC=2;AN=184;BQB=0.928609;DP=3487;DP4=1939,1329,21,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11657e-18;MQSB=0.61575;RPB=0.905144;SGB=28.1074;VDB=0.0634708;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.7:4421633 chr07:004421633 0 W/4421633-4421633 FN919-S Single Base Substitution T-C INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2102-S.SNP.7:4424618 chr07:004424618 0 W/4424618-4424618 FN2102-S SNP G -> T AC=1;AN=168;BQB=0.0158208;DP=3985;DP4=2071,1884,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.78812e-05;MQSB=0.967701;RPB=0.128714;SGB=-105.072;VDB=0.222921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.7:4436384 chr07:004436384 0 W/4436384-4436384 FN3613-S SNP G -> T AC=1;AN=190;BQB=0.902249;DP=2792;DP4=1106,1582,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00967049;MQB=0.000126814;MQSB=5.29621e-05;RPB=0.2673;SGB=50.3161;VDB=0.642875;EFF=INTRON(MODIFIER||||445|LOC_Os07g08610|protein_coding|CODING|LOC_Os07g08610.1|1|1) FN320-S.SNP.7:4436880 chr07:004436880 0 W/4436880-4436880 FN320-S Single Base Substitution G-A INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2386.SNP.7:4443183 chr07:004443183 0 W/4443183-4443183 FN2386 SNP C -> T AC=1;AN=192;BQB=0.112068;DP=4788;DP4=2361,2132,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.16963e-10;MQSB=0.155914;RPB=0.429622;SGB=-37.0704;VDB=0.720698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C314Y|329|LOC_Os07g08620|protein_coding|CODING|LOC_Os07g08620.1|2|1) FN2387.SNP.7:4445179 chr07:004445179 0 W/4445179-4445179 FN2387 SNP A -> T AC=1;AN=192;BQB=0.576879;DP=4457;DP4=2069,2031,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.73722e-16;MQSB=0.535295;RPB=0.931034;SGB=96.8096;VDB=0.323628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.7:4446007 chr07:004446007 0 W/4446007-4446007 FN2224-S SNP G -> A AC=1;AN=190;BQB=0.621845;DP=4892;DP4=2195,2470,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2045e-13;MQSB=0.991632;RPB=0.815119;SGB=121.957;VDB=0.736724;EFF=INTRON(MODIFIER||||929|LOC_Os07g08630|protein_coding|CODING|LOC_Os07g08630.1|1|1) FN2307.SNP.7:4451938 chr07:004451938 0 W/4451938-4451938 FN2307 SNP A -> T AC=1;AN=192;BQB=0.689695;DP=4745;DP4=2418,1895,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00105374;MQB=0.00321441;MQSB=0.00864811;RPB=0.815661;SGB=59.6861;VDB=0.655061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.7:4467216 chr07:004467216 0 W/4467216-4467216 FN3545-S SNP T -> A AC=1;AN=188;BQB=0.966052;DP=3296;DP4=1510,1640,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.20948e-11;MQSB=0.855215;RPB=0.973022;SGB=8.62479;VDB=0.886471;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.7:4470366 chr07:004470366 0 W/4470366-4470366 FN-114 Single Base Substitution C-A INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN783-S.SNP.7:4475176 chr07:004475176 0 W/4475176-4475176 FN783-S Single Base Substitution C-T INTERGENIC HOMO SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2611-S.SNP.7:4481162 chr07:004481162 0 W/4481162-4481162 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.937231;DP=4882;DP4=2248,2345,19,27;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99225e-26;MQSB=0.98398;RPB=0.998177;SGB=54.4347;VDB=0.894921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.7:4493160 chr07:004493160 0 W/4493160-4493160 FN1025-S Single Base Substitution C-T INTRON HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1451-S.SNP.7:4508412 chr07:004508412 0 W/4508412-4508412 FN1451-S Single Base Substitution T-G INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-87.SNP.7:4512643 chr07:004512643 0 W/4512643-4512643 FN-87 Single Base Substitution G-A INTRON HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3420-S.SNP.7:4513630 chr07:004513630 0 W/4513630-4513630 FN3420-S SNP G -> C AC=1;AN=184;BQB=0.993404;DP=2607;DP4=975,1548,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.04317e-08;MQSB=0.992461;RPB=0.3095;SGB=15.7097;VDB=0.423076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R18G|175|LOC_Os07g08770|protein_coding|CODING|LOC_Os07g08770.1|1|1) FN589-S.SNP.7:4528240 chr07:004528240 0 W/4528240-4528240 FN589-S Single Base Substitution G-A INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3714-S.SNP.7:4543598 chr07:004543598 0 W/4543598-4543598 FN3714-S SNP T -> A AC=1;AN=190;BQB=0.991302;DP=3243;DP4=1429,1634,14,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.37298e-20;MQSB=0.999297;RPB=0.636759;SGB=158.388;VDB=0.0262201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.7:4545089 chr07:004545089 0 W/4545089-4545089 FN3853-S SNP G -> T AC=2;AN=158;BQB=0.987394;DP=1652;DP4=619,894,7,6;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000605327;MQB=2.07439e-05;MQSB=0.0423576;RPB=0.812998;SGB=34.0735;VDB=0.655596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R48L|602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|1|1),UTR_5_PRIME(MODIFIER||1347||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|1|1) FN3880-S.SNP.7:4546356 chr07:004546356 0 W/4546356-4546356 FN3880-S SNP A -> C AC=1;AN=158;BQB=0.985448;DP=2084;DP4=988,1019,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.79841e-07;MQSB=0.995397;RPB=0.697327;SGB=42.6978;VDB=0.983316;EFF=SPLICE_SITE_REGION(LOW||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|3|1),SPLICE_SITE_REGION(LOW||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|3|1),INTRON(MODIFIER||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|3|1),INTRON(MODIFIER||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|3|1) FN3626-S.SNP.7:4546561 chr07:004546561 0 W/4546561-4546561 FN3626-S SNP A -> T AC=1;AN=190;BQB=0.996045;DP=2810;DP4=1309,1348,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.31209e-10;MQSB=0.934101;RPB=0.917594;SGB=71.8647;VDB=0.329828;EFF=SPLICE_SITE_REGION(LOW||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|4|1),SPLICE_SITE_REGION(LOW||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|4|1),INTRON(MODIFIER||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|4|1),INTRON(MODIFIER||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|4|1) FN4020-S.SNP.7:4546827 chr07:004546827 0 W/4546827-4546827 FN4020-S SNP T -> C AC=1;AN=168;BQB=0.965849;DP=2284;DP4=1045,1118,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66343e-08;MQSB=0.969007;RPB=0.61056;SGB=27.0464;VDB=0.288163;EFF=INTRON(MODIFIER||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|4|1),INTRON(MODIFIER||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|4|1) FN4150-S.SNP.7:4550551 chr07:004550551 0 W/4550551-4550551 FN4150-S SNP T -> C AC=2;AN=170;BQB=0.975122;DP=2252;DP4=1073,1015,21,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.72831e-23;MQSB=0.961374;RPB=0.998602;SGB=162.476;VDB=0.742025;EFF=INTRON(MODIFIER||||602|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.1|10|1),INTRON(MODIFIER||||470|LOC_Os07g08810|protein_coding|CODING|LOC_Os07g08810.2|10|1) FN3760-S.SNP.7:4554318 chr07:004554318 0 W/4554318-4554318 FN3760-S SNP C -> A AC=1;AN=190;BQB=0.981832;DP=2879;DP4=1455,1288,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000347343;MQB=0.000416809;MQSB=0.765769;RPB=0.952738;SGB=28.9929;VDB=0.838691;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.7:4556916 chr07:004556916 0 W/4556916-4556916 FN406-S Single Base Substitution C-T INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN-328.SNP.7:4567773 chr07:004567773 0 W/4567773-4567773 FN-328 Single Base Substitution C-T INTERGENIC HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1012-S.SNP.7:4578260 chr07:004578260 0 W/4578260-4578260 FN1012-S Single Base Substitution T-C INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3353-S.SNP.7:4578365 chr07:004578365 0 W/4578365-4578365 FN3353-S SNP A -> T AC=1;AN=184;BQB=0.961116;DP=2866;DP4=1448,1296,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000175466;MQSB=0.752776;RPB=0.485855;SGB=35.1773;VDB=0.375148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.7:4580368 chr07:004580368 0 W/4580368-4580368 FN2424 SNP C -> A AC=1;AN=200;BQB=0.993839;DP=5355;DP4=3009,2028,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60843e-15;MQSB=0.997111;RPB=0.953248;SGB=114.132;VDB=0.980924;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.7:4581810 chr07:004581810 0 W/4581810-4581810 FN4305-S SNP C -> A AC=1;AN=170;BQB=0.941463;DP=2321;DP4=1166,1093,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.35187e-09;MQSB=0.872298;RPB=0.0771535;SGB=74.528;VDB=0.455117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.7:4583721 chr07:004583721 0 W/4583721-4583721 FN1441-S Single Base Substitution T-C INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN-9.SNP.7:4587606 chr07:004587606 0 W/4587606-4587606 FN-9 Single Base Substitution T-A INTRON Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN-9.SNP.7:4587607 chr07:004587607 0 W/4587607-4587607 FN-9 Single Base Substitution G-T INTRON Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN-252.SNP.7:4589330 chr07:004589330 0 W/4589330-4589330 FN-252 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN709-S.SNP.7:4590156 chr07:004590156 0 W/4590156-4590156 FN709-S Single Base Substitution C-A INTRON HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN2293.SNP.7:4591789 chr07:004591789 0 W/4591789-4591789 FN2293 SNP C -> T AC=1;AN=192;BQB=0.214255;DP=5048;DP4=2328,2419,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.22568e-09;MQSB=0.963847;RPB=0.999238;SGB=-14.2043;VDB=0.227424;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.7:4608946 chr07:004608946 0 W/4608946-4608946 FN755-S Single Base Substitution C-T INTRON HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4025-S.SNP.7:4622042 chr07:004622042 0 W/4622042-4622042 FN4025-S SNP G -> C AC=1;AN=168;BQB=0.948494;DP=2624;DP4=1265,1271,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=8.93849e-05;MQSB=0.500313;RPB=0.323622;SGB=24.4556;VDB=0.823921;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D734H|906|LOC_Os07g08890|protein_coding|CODING|LOC_Os07g08890.1|2|1) FN-218.SNP.7:4628688 chr07:004628688 0 W/4628688-4628688 FN-218 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN512-S.SNP.7:4629321 chr07:004629321 0 W/4629321-4629321 FN512-S Single Base Substitution T-C INTRON HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1438-S.SNP.7:4630759 chr07:004630759 0 W/4630759-4630759 FN1438-S Single Base Substitution C-T STOP_GAINED HET LOC_Os07g08900 retrotransposon protein, putative, unclassified, expressed SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2664-S.SNP.7:4631998 chr07:004631998 0 W/4631998-4631998 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.994482;DP=4064;DP4=1913,1931,9,19;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.68714e-10;MQSB=0.422497;RPB=0.883279;SGB=90.7419;VDB=0.294321;EFF=INTRON(MODIFIER||||844|LOC_Os07g08910|protein_coding|CODING|LOC_Os07g08910.1|4|1) FN3789-S.SNP.7:4633953 chr07:004633953 0 W/4633953-4633953 FN3789-S SNP C -> T AC=1;AN=190;BQB=0.923352;DP=3614;DP4=1728,1790,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00110681;MQB=7.90602e-07;MQSB=0.380965;RPB=0.995493;SGB=50.3161;VDB=0.69939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G186D|844|LOC_Os07g08910|protein_coding|CODING|LOC_Os07g08910.1|2|1) FN985-S.SNP.7:4634002 chr07:004634002 0 W/4634002-4634002 FN985-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4095-S.SNP.7:4638217 chr07:004638217 0 W/4638217-4638217 FN4095-S SNP G -> A AC=2;AN=182;BQB=0.914576;DP=3136;DP4=1175,1826,3,14;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=7.01627e-07;MQSB=0.136578;RPB=0.602315;SGB=71.1765;VDB=0.0713759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.7:4642834 chr07:004642834 0 W/4642834-4642834 FN3568-S SNP G -> A AC=1;AN=188;BQB=0.994514;DP=2999;DP4=1521,1366,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.32468e-10;MQSB=0.80555;RPB=0.688312;SGB=43.0708;VDB=0.608216;EFF=INTRON(MODIFIER||||289|LOC_Os07g08930|protein_coding|CODING|LOC_Os07g08930.1|1|1) FN3568-S.SNP.7:4642835 chr07:004642835 0 W/4642835-4642835 FN3568-S SNP G -> A AC=1;AN=188;BQB=0.910355;DP=2996;DP4=1530,1377,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.01197e-10;MQSB=0.694121;RPB=0.930501;SGB=62.6088;VDB=0.55509;EFF=INTRON(MODIFIER||||289|LOC_Os07g08930|protein_coding|CODING|LOC_Os07g08930.1|1|1) FN2344.SNP.7:4649205 chr07:004649205 0 W/4649205-4649205 FN2344 SNP G -> T AC=1;AN=192;BQB=0.965047;DP=5032;DP4=2332,2406,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=2.46725e-13;MQSB=0.708391;RPB=0.985587;SGB=24.5626;VDB=0.320795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.7:4661721 chr07:004661721 0 W/4661721-4661721 FN2108-S SNP T -> G AC=1;AN=168;BQB=0.00161771;DP=4312;DP4=2032,2224,12,29;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.84433e-10;MQSB=0.969333;RPB=0.298593;SGB=-505.137;VDB=0.734619;EFF=INTRON(MODIFIER||||308|LOC_Os07g08960|protein_coding|CODING|LOC_Os07g08960.1|2|1) FN4144-S.SNP.7:4663698 chr07:004663698 0 W/4663698-4663698 FN4144-S SNP G -> A AC=1;AN=170;BQB=0.975876;DP=2479;DP4=1189,1239,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.13264e-06;MQSB=0.980037;RPB=0.534988;SGB=43.4296;VDB=0.443771;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G676|699|LOC_Os07g08970|protein_coding|CODING|LOC_Os07g08970.1|9|1) FN1508-S.SNP.7:4666351 chr07:004666351 0 W/4666351-4666351 FN1508-S Single Base Substitution T-G INTRON HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1410-S.SNP.7:4671096 chr07:004671096 0 W/4671096-4671096 FN1410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN-283.SNP.7:4683870 chr07:004683870 0 W/4683870-4683870 FN-283 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g09000 WD domain, G-beta repeat domain containing protein, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3911-S.SNP.7:4686278 chr07:004686278 0 W/4686278-4686278 FN3911-S SNP G -> T AC=1;AN=158;BQB=7.39552e-09;DP=2535;DP4=1175,1280,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000628738;MQSB=0.868568;RPB=0.975566;SGB=40.8124;VDB=0.404687;EFF=INTRON(MODIFIER||||387|LOC_Os07g09000|protein_coding|CODING|LOC_Os07g09000.1|8|1) FN4134-S.SNP.7:4686501 chr07:004686501 0 W/4686501-4686501 FN4134-S SNP C -> T AC=2;AN=182;BQB=0.865699;DP=2855;DP4=1291,1477,19,17;HOB=0.0217365;ICB=0.494567;MQ=38;MQ0F=0;MQB=5.34106e-13;MQSB=0.293721;RPB=0.974199;SGB=156.883;VDB=0.434785;EFF=INTRON(MODIFIER||||387|LOC_Os07g09000|protein_coding|CODING|LOC_Os07g09000.1|8|1) FN994-S.SNP.7:4691403 chr07:004691403 0 W/4691403-4691403 FN994-S Single Base Substitution G-A INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN776-S.SNP.7:4695097 chr07:004695097 0 W/4695097-4695097 FN776-S Single Base Substitution G-C INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN-193.SNP.7:4713479 chr07:004713479 0 W/4713479-4713479 FN-193 Single Base Substitution C-T INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1522-S.SNP.7:4714209 chr07:004714209 0 W/4714209-4714209 FN1522-S Single Base Substitution C-T INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN2531-S.SNP.7:4716089 chr07:004716089 0 W/4716089-4716089 FN2531-S SNP C -> G AC=2;AN=198;BQB=0.219357;DP=4049;DP4=1755,2032,18,30;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=2.2792e-28;MQSB=0.547437;RPB=0.971885;SGB=109.793;VDB=0.248575;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.7:4718229 chr07:004718229 0 W/4718229-4718229 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN2492.SNP.7:4719405 chr07:004719405 0 W/4719405-4719405 FN2492 SNP T -> C AC=1;AN=200;BQB=0.573397;DP=5146;DP4=2755,2143,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92907e-09;MQSB=0.323724;RPB=0.758682;SGB=43.8747;VDB=0.636348;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.7:4720422 chr07:004720422 0 W/4720422-4720422 FN-207 Single Base Substitution G-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2291.SNP.7:4721292 chr07:004721292 0 W/4721292-4721292 FN2291 SNP G -> C AC=1;AN=192;BQB=0.99839;DP=4881;DP4=2096,2472,15,26;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0;MQB=0.0122651;MQSB=0.467755;RPB=0.30585;SGB=90.4583;VDB=0.0910842;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.7:4731309 chr07:004731309 0 W/4731309-4731309 FN1129-S Single Base Substitution C-A INTRON HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN-181.SNP.7:4750969 chr07:004750969 0 W/4750969-4750969 FN-181 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3789-S.SNP.7:4753262 chr07:004753262 0 W/4753262-4753262 FN3789-S SNP T -> A AC=1;AN=190;BQB=0.894356;DP=3417;DP4=2176,1016,19,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=3.54169e-07;MQSB=0.451893;RPB=0.95987;SGB=49.1985;VDB=0.843448;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.7:4756704 chr07:004756704 0 W/4756704-4756704 FN1519-S Single Base Substitution T-C INTRON Homo SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2648-S.SNP.7:4758388 chr07:004758388 0 W/4758388-4758388 FN2648-S SNP C -> T AC=2;AN=200;BQB=0.967423;DP=5223;DP4=2576,2314,24,29;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.31042e-18;MQSB=0.0101847;RPB=0.315583;SGB=180.871;VDB=0.201338;EFF=UTR_3_PRIME(MODIFIER||135||194|LOC_Os07g09110|protein_coding|CODING|LOC_Os07g09110.1|1|1) FN1652-S.SNP.7:4761142 chr07:004761142 0 W/4761142-4761142 FN1652-S Single Base Substitution C-T INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN-225.SNP.7:4761748 chr07:004761748 0 W/4761748-4761748 FN-225 Single Base Substitution G-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1634-S.SNP.7:4771348 chr07:004771348 0 W/4771348-4771348 FN1634-S Single Base Substitution G-T INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1644-S.SNP.7:4777753 chr07:004777753 0 W/4777753-4777753 FN1644-S Single Base Substitution A-T INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-330.SNP.7:4778059 chr07:004778059 0 W/4778059-4778059 FN-330 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g09160 expressed protein SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1131-S.SNP.7:4786552 chr07:004786552 0 W/4786552-4786552 FN1131-S Single Base Substitution C-T INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN3693-S.SNP.7:4792440 chr07:004792440 0 W/4792440-4792440 FN3693-S SNP A -> T AC=1;AN=190;BQB=0.832599;DP=2346;DP4=445,1694,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.137255;MQB=0.160764;MQSB=1.94373e-34;RPB=0.180535;SGB=62.7569;VDB=0.908694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.7:4810883 chr07:004810883 0 W/4810883-4810883 FN2161-S SNP G -> A AC=2;AN=168;BQB=0.000895927;DP=2834;DP4=1902,864,40,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.46518e-14;MQSB=0.723691;RPB=0.827073;SGB=-250.865;VDB=0.265054;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.7:4814146 chr07:004814146 0 W/4814146-4814146 FN740-S Single Base Substitution G-T INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2625-S.SNP.7:4820703 chr07:004820703 0 W/4820703-4820703 FN2625-S SNP T -> C AC=2;AN=200;BQB=0.91249;DP=4800;DP4=2137,2458,24,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.9757e-32;MQSB=0.915213;RPB=0.935176;SGB=184.476;VDB=0.0039913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:4836415 chr07:004836415 0 W/4836415-4836415 FN2554-S SNP G -> A AC=2;AN=198;BQB=0.856576;DP=3583;DP4=1750,1641,11,11;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0159085;MQB=5.35372e-05;MQSB=5.34842e-12;RPB=0.92334;SGB=68.91;VDB=0.663751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.7:4836439 chr07:004836439 0 W/4836439-4836439 FN1685-S SNP G -> T AC=1;AN=188;BQB=0.702444;DP=1359;DP4=623,693,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0367918;MQB=0.839807;MQSB=4.08175e-10;RPB=0.986159;SGB=21.8113;VDB=0.991118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.7:4838978 chr07:004838978 0 W/4838978-4838978 FN-387 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g09230 retrotransposon protein, putative, unclassified, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2083-S.SNP.7:4839530 chr07:004839530 0 W/4839530-4839530 FN2083-S SNP A -> T AC=2;AN=168;BQB=0.922873;DP=1484;DP4=709,724,8,5;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.00336927;MQB=0.0377412;MQSB=4.47377e-25;RPB=0.310112;SGB=34.748;VDB=0.0159583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E970V|1080|LOC_Os07g09230|protein_coding|CODING|LOC_Os07g09230.1|1|1) FN2083-S.SNP.7:4839531 chr07:004839531 0 W/4839531-4839531 FN2083-S SNP G -> T AC=2;AN=168;BQB=0.699704;DP=1470;DP4=697,729,10,4;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.00340136;MQB=0.0120813;MQSB=1.917e-28;RPB=0.469126;SGB=19.7539;VDB=0.0111115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E970D|1080|LOC_Os07g09230|protein_coding|CODING|LOC_Os07g09230.1|1|1) FN1725-S.SNP.7:4842602 chr07:004842602 0 W/4842602-4842602 FN1725-S SNP A -> G AC=1;AN=188;BQB=0.798668;DP=1013;DP4=572,408,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000987167;MQB=0.0584697;MQSB=0.425304;RPB=0.988642;SGB=30.8063;VDB=0.594311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V986A|1674|LOC_Os07g09240|protein_coding|CODING|LOC_Os07g09240.1|2|1) FN2307.SNP.7:4843089 chr07:004843089 0 W/4843089-4843089 FN2307 SNP T -> C AC=2;AN=192;BQB=0.389385;DP=5301;DP4=2248,2466,31,36;HOB=0.0206163;ICB=0.494846;MQ=22;MQ0F=0.241464;MQB=0.376967;MQSB=0;RPB=0.999257;SGB=-129.105;VDB=0.193349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T824A|1674|LOC_Os07g09240|protein_coding|CODING|LOC_Os07g09240.1|2|1) FN4100-S.SNP.7:4843563 chr07:004843563 0 W/4843563-4843563 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.929542;DP=4717;DP4=2663,1923,13,12;HOB=6.03792e-05;ICB=0.000121422;MQ=20;MQ0F=0.314819;MQB=0.00725364;MQSB=1.16632e-15;RPB=0.145093;SGB=107.263;VDB=0.638257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A666T|1674|LOC_Os07g09240|protein_coding|CODING|LOC_Os07g09240.1|2|1) FN3852-S.SNP.7:4845349 chr07:004845349 0 W/4845349-4845349 FN3852-S SNP C -> A AC=1;AN=158;BQB=0.925215;DP=2539;DP4=1107,1352,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.254825;MQB=0.215334;MQSB=0;RPB=0.069789;SGB=82.0227;VDB=0.737188;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R94|1674|LOC_Os07g09240|protein_coding|CODING|LOC_Os07g09240.1|1|1) FN1575-S.SNP.7:4846649 chr07:004846649 0 W/4846649-4846649 FN1575-S Single Base Substitution C-T INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN2364.SNP.7:4849103 chr07:004849103 0 W/4849103-4849103 FN2364 SNP G -> A AC=1;AN=192;BQB=0.962088;DP=4829;DP4=2230,2371,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14335e-07;MQSB=0.55963;RPB=0.836844;SGB=32.6514;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.7:4866430 chr07:004866430 0 W/4866430-4866430 FN1410-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4109-S.SNP.7:4872957 chr07:004872957 0 W/4872957-4872957 FN4109-S SNP A -> T AC=1;AN=182;BQB=0.978881;DP=2867;DP4=1495,1280,12,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.87088e-10;MQSB=0.424024;RPB=0.0204264;SGB=84.7091;VDB=0.00561138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2206-S.SNP.7:4873694 chr07:004873694 0 W/4873694-4873694 FN2206-S SNP C -> T AC=1;AN=190;BQB=0.992047;DP=5170;DP4=1848,3053,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193424;MQB=1.73169e-08;MQSB=0.728114;RPB=0.871989;SGB=2.55724;VDB=0.329868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3946-S.SNP.7:4874330 chr07:004874330 0 W/4874330-4874330 FN3946-S SNP G -> A AC=2;AN=168;BQB=0.667303;DP=1182;DP4=1081,52,13,1;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19063e-08;MQSB=0.583157;RPB=0.843979;SGB=56.6036;VDB=0.128556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.7:4875765 chr07:004875765 0 W/4875765-4875765 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.998233;DP=2781;DP4=1390,1285,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.8049e-10;MQSB=0.993723;RPB=0.981876;SGB=71.8647;VDB=0.470013;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.7:4875768 chr07:004875768 0 W/4875768-4875768 FN654-S Single Base Substitution T-G INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3945-S.SNP.7:4882604 chr07:004882604 0 W/4882604-4882604 FN3945-S SNP T -> G AC=2;AN=168;BQB=0.955758;DP=2272;DP4=1104,1075,23,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.04764e-19;MQSB=0.998975;RPB=0.996086;SGB=28.5146;VDB=0.591358;EFF=UTR_5_PRIME(MODIFIER||541||138|LOC_Os07g09310|protein_coding|CODING|LOC_Os07g09310.1|1|1),UTR_5_PRIME(MODIFIER||541||88|LOC_Os07g09310|protein_coding|CODING|LOC_Os07g09310.2|1|1) FN2211-S.SNP.7:4882831 chr07:004882831 0 W/4882831-4882831 FN2211-S SNP G -> A AC=2;AN=190;BQB=0.791022;DP=4772;DP4=2206,2225,24,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.05918e-22;MQSB=0.988249;RPB=0.857056;SGB=53.8352;VDB=0.88055;EFF=UTR_3_PRIME(MODIFIER||281||865|LOC_Os07g09320|protein_coding|CODING|LOC_Os07g09320.1|7|1) FN1380-S.SNP.7:4890777 chr07:004890777 0 W/4890777-4890777 FN1380-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN2639-S.SNP.7:4896570 chr07:004896570 0 W/4896570-4896570 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.879617;DP=4385;DP4=2170,2067,18,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.97388e-14;MQSB=0.0928118;RPB=0.415958;SGB=79.9264;VDB=0.738736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.7:4900664 chr07:004900664 0 W/4900664-4900664 FN1379-S Single Base Substitution A-T INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN_949-1.SNP.7:4905822 chr07:004905822 0 W/4905822-4905822 FN_949-1 Single Base Substitution G-C Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1627-S.SNP.7:4905863 chr07:004905863 0 W/4905863-4905863 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3518-S.SNP.7:4911038 chr07:004911038 0 W/4911038-4911038 FN3518-S SNP T -> G AC=1;AN=188;BQB=0.993821;DP=2893;DP4=1488,1313,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.73062e-13;MQSB=0.839011;RPB=0.142859;SGB=94.4119;VDB=0.0399563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.7:4911039 chr07:004911039 0 W/4911039-4911039 FN3518-S SNP G -> T AC=1;AN=188;BQB=0.99272;DP=2883;DP4=1489,1314,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56655e-13;MQSB=0.866466;RPB=0.188173;SGB=89.8686;VDB=0.0226389;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.7:4917037 chr07:004917037 0 W/4917037-4917037 FN1327-S Single Base Substitution T-A INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN631-S.SNP.7:4920843 chr07:004920843 0 W/4920843-4920843 FN631-S Single Base Substitution G-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. W443-5-1-3.SNP.7:4924668 chr07:004924668 0 W/4924668-4924668 W443-5-1-3 Single Base Substitution T-A INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3629-S.SNP.7:4931905 chr07:004931905 0 W/4931905-4931905 FN3629-S SNP G -> T AC=1;AN=190;BQB=0.775429;DP=2945;DP4=1268,1555,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00848896;MQB=6.10997e-05;MQSB=0.253493;RPB=0.275013;SGB=39.6545;VDB=0.564973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.7:4933199 chr07:004933199 0 W/4933199-4933199 FN2374 SNP G -> T AC=1;AN=192;BQB=0.507726;DP=5119;DP4=2403,2474,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000195351;MQB=7.05609e-07;MQSB=0.937089;RPB=0.860184;SGB=23.7852;VDB=0.429854;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.7:4949286 chr07:004949286 0 W/4949286-4949286 FN986-S Single Base Substitution C-T INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3432-S.SNP.7:4957727 chr07:004957727 0 W/4957727-4957727 FN3432-S SNP A -> T AC=2;AN=184;BQB=0.703456;DP=2427;DP4=1193,1121,12,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.14392e-15;MQSB=0.63559;RPB=0.46014;SGB=99.14;VDB=0.736686;EFF=INTRON(MODIFIER||||1162|LOC_Os07g09400|protein_coding|CODING|LOC_Os07g09400.1|17|1) FN1602-S.SNP.7:4959596 chr07:004959596 0 W/4959596-4959596 FN1602-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1602-S.SNP.7:4959597 chr07:004959597 0 W/4959597-4959597 FN1602-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g09400 RNA ligase isoform 1, putative, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1602-S.SNP.7:4959598 chr07:004959598 0 W/4959598-4959598 FN1602-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g09400 RNA ligase isoform 1, putative, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN4081-S.SNP.7:4962731 chr07:004962731 0 W/4962731-4962731 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.34898;DP=3308;DP4=1704,1534,11,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.79506e-07;MQSB=0.999653;RPB=0.555155;SGB=66.6657;VDB=0.908907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1096V|1162|LOC_Os07g09400|protein_coding|CODING|LOC_Os07g09400.1|27|1) FN2715-S.SNP.7:4967600 chr07:004967600 0 W/4967600-4967600 FN2715-S SNP G -> T AC=1;AN=200;BQB=0.298207;DP=4669;DP4=2180,2256,9,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0141358;MQB=2.92829e-08;MQSB=7.97126e-05;RPB=0.976009;SGB=26.8797;VDB=0.3204;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.7:4969099 chr07:004969099 0 W/4969099-4969099 FN-407 Single Base Substitution T-A INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN1058-S.SNP.7:4969099 chr07:004969099 0 W/4969099-4969099 FN1058-S Single Base Substitution T-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN908-S.SNP.7:4969099 chr07:004969099 0 W/4969099-4969099 FN908-S Single Base Substitution T-A INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1136-19-S.SNP.7:4986564 chr07:004986564 0 W/4986564-4986564 FN1136-19-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2742-S.SNP.7:4997465 chr07:004997465 0 W/4997465-4997465 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.126838;DP=4788;DP4=2213,2223,42,63;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0;MQSB=0.769328;RPB=3.84666e-31;SGB=-2926.77;VDB=7.34819e-30;EFF=INTRON(MODIFIER||||55|LOC_Os07g09460|protein_coding|CODING|LOC_Os07g09460.2|4|1),INTRON(MODIFIER||||98|LOC_Os07g09460|protein_coding|CODING|LOC_Os07g09460.1|3|1) FN3569-S.SNP.7:4998650 chr07:004998650 0 W/4998650-4998650 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.955129;DP=2512;DP4=1216,1133,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.53425e-08;MQSB=0.267655;RPB=0.471694;SGB=23.5329;VDB=0.0973279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.7:5004942 chr07:005004942 0 W/5004942-5004942 FN3632-S SNP C -> A AC=2;AN=190;BQB=0.42406;DP=2788;DP4=1668,999,20,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31655e-15;MQSB=0.962587;RPB=0.228076;SGB=144.727;VDB=0.225881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D342E|533|LOC_Os07g09480|protein_coding|CODING|LOC_Os07g09480.1|1|1) FN618-S.SNP.7:5005795 chr07:005005795 0 W/5005795-5005795 FN618-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3955-S.SNP.7:5007175 chr07:005007175 0 W/5007175-5007175 FN3955-S SNP G -> C AC=1;AN=168;BQB=0.999892;DP=2693;DP4=1264,1297,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.25768e-10;MQSB=0.98947;RPB=0.552596;SGB=78.7577;VDB=0.299437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:5009087 chr07:005009087 0 W/5009087-5009087 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.746642;DP=4538;DP4=2202,2031,16,20;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.43955e-13;MQSB=0.0962277;RPB=0.910569;SGB=78.6516;VDB=0.708014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.7:5011256 chr07:005011256 0 W/5011256-5011256 FN2216-S SNP A -> G AC=2;AN=190;BQB=0.962302;DP=4462;DP4=2267,1742,36,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.57771e-24;MQSB=0.796735;RPB=0.979489;SGB=226.696;VDB=0.814867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.7:5021828 chr07:005021828 0 W/5021828-5021828 FN1256-S Single Base Substitution G-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1318-S.SNP.7:5029457 chr07:005029457 0 W/5029457-5029457 FN1318-S Single Base Substitution C-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1043-S.SNP.7:5059871 chr07:005059871 0 W/5059871-5059871 FN1043-S Single Base Substitution C-T INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN-257.SNP.7:5060176 chr07:005060176 0 W/5060176-5060176 FN-257 Single Base Substitution A-T INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN734-S.SNP.7:5061179 chr07:005061179 0 W/5061179-5061179 FN734-S Single Base Substitution C-T INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN-233.SNP.7:5063267 chr07:005063267 0 W/5063267-5063267 FN-233 Single Base Substitution C-G INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3064-S.SNP.7:5069628 chr07:005069628 0 W/5069628-5069628 FN3064-S SNP C -> T AC=2;AN=184;BQB=0.532444;DP=2927;DP4=1535,1273,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.32694e-12;MQSB=0.995092;RPB=0.471204;SGB=107.526;VDB=0.858322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.7:5070103 chr07:005070103 0 W/5070103-5070103 FN1673-S SNP G -> A AC=1;AN=188;BQB=0.0283402;DP=3986;DP4=1876,2063,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.96056e-11;MQSB=0.993164;RPB=0.99156;SGB=-72.0994;VDB=0.898169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.7:5070662 chr07:005070662 0 W/5070662-5070662 FN1475-S Single Base Substitution A-G INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2290.SNP.7:5076939 chr07:005076939 0 W/5076939-5076939 FN2290 SNP C -> T AC=1;AN=192;BQB=0.529152;DP=4321;DP4=1638,2250,10,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000231428;MQB=2.80375e-13;MQSB=0.000362826;RPB=0.971352;SGB=33.9487;VDB=0.713549;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E179|774|LOC_Os07g09580|protein_coding|CODING|LOC_Os07g09580.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E179|477|LOC_Os07g09580|protein_coding|CODING|LOC_Os07g09580.2|2|1) FN1197-S.SNP.7:5078901 chr07:005078901 0 W/5078901-5078901 FN1197-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3474-S.SNP.7:5092958 chr07:005092958 0 W/5092958-5092958 FN3474-S SNP A -> G AC=1;AN=184;BQB=0.874146;DP=2570;DP4=1204,1211,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1211e-08;MQSB=0.788448;RPB=0.482486;SGB=0.715177;VDB=0.218775;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.7:5095591 chr07:005095591 0 W/5095591-5095591 FN1309-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3360-S.SNP.7:5095634 chr07:005095634 0 W/5095634-5095634 FN3360-S SNP C -> T AC=2;AN=184;BQB=0.998046;DP=2494;DP4=1314,1077,17,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.10414e-15;MQSB=0.0664425;RPB=0.851496;SGB=130.135;VDB=0.109244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.7:5103475 chr07:005103475 0 W/5103475-5103475 FN-129 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g09610 CAMK_KIN1/SNF1/Nim1_like_AMPKh.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2755-S.SNP.7:5110292 chr07:005110292 0 W/5110292-5110292 FN2755-S SNP A -> G AC=1;AN=200;BQB=0.229452;DP=4293;DP4=1929,2174,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42097e-10;MQSB=0.825743;RPB=0.287283;SGB=76.3213;VDB=0.241805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.7:5110685 chr07:005110685 0 W/5110685-5110685 FN2436 SNP C -> A AC=2;AN=200;BQB=0.999738;DP=3613;DP4=2188,1229,33,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90647e-25;MQSB=0.799149;RPB=0.994663;SGB=210.84;VDB=0.444992;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.7:5116478 chr07:005116478 0 W/5116478-5116478 FN944-S Single Base Substitution A-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2553-S.SNP.7:5123310 chr07:005123310 0 W/5123310-5123310 FN2553-S SNP C -> T AC=2;AN=198;BQB=0.476994;DP=4416;DP4=1908,2228,27,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.62353e-22;MQSB=0.970093;RPB=0.320044;SGB=89.0321;VDB=0.486912;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.7:5131252 chr07:005131252 0 W/5131252-5131252 FN2190-S SNP G -> T AC=1;AN=190;BQB=0.926251;DP=4957;DP4=2241,2401,19,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.29008e-23;MQSB=0.862351;RPB=0.098076;SGB=167.496;VDB=0.0743582;EFF=INTRON(MODIFIER||||655|LOC_Os07g09670|protein_coding|CODING|LOC_Os07g09670.1|1|1) FN2698-S.SNP.7:5133398 chr07:005133398 0 W/5133398-5133398 FN2698-S SNP T -> C AC=1;AN=200;BQB=0.72383;DP=4845;DP4=2468,2102,26,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.60858e-10;MQSB=0.919034;RPB=0.987686;SGB=123.188;VDB=0.85605;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.7:5140231 chr07:005140231 0 W/5140231-5140231 FN988-S Single Base Substitution T-A INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3885-S.SNP.7:5140290 chr07:005140290 0 W/5140290-5140290 FN3885-S SNP T -> A AC=2;AN=158;BQB=0.936797;DP=2579;DP4=1224,1200,12,22;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.84738e-21;MQSB=0.980972;RPB=0.997923;SGB=143.195;VDB=0.165274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.7:5140291 chr07:005140291 0 W/5140291-5140291 FN3885-S SNP T -> A AC=2;AN=158;BQB=0.983194;DP=2576;DP4=1240,1211,11,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.80431e-21;MQSB=0.991635;RPB=0.998462;SGB=143.195;VDB=0.194532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.7:5144593 chr07:005144593 0 W/5144593-5144593 FN2620-S SNP A -> G AC=1;AN=198;BQB=0.746117;DP=4366;DP4=1913,2150,14,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20496e-16;MQSB=0.500177;RPB=0.51732;SGB=104.861;VDB=0.144416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.7:5144794 chr07:005144794 0 W/5144794-5144794 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.941849;DP=2699;DP4=1460,966,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.00197289;MQSB=4.43023e-05;RPB=0.6855;SGB=28.9929;VDB=0.977856;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.7:5150530 chr07:005150530 0 W/5150530-5150530 FN2475 SNP C -> T AC=2;AN=200;BQB=0.989283;DP=4741;DP4=2047,2252,17,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.72362e-21;MQSB=0.733912;RPB=0.212241;SGB=-0.401659;VDB=0.507604;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.7:5160802 chr07:005160802 0 W/5160802-5160802 FN512-S Single Base Substitution G-C INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3832-S.SNP.7:5167908 chr07:005167908 0 W/5167908-5167908 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.805921;DP=2802;DP4=1575,1146,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.85865e-06;MQSB=0.21497;RPB=0.672449;SGB=58.2031;VDB=0.503061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.7:5175005 chr07:005175005 0 W/5175005-5175005 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.859403;DP=3115;DP4=1682,1340,11,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.29003e-08;MQSB=0.992761;RPB=0.547779;SGB=53.2642;VDB=0.91653;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.7:5186089 chr07:005186089 0 W/5186089-5186089 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3389-S.SNP.7:5205367 chr07:005205367 0 W/5205367-5205367 FN3389-S SNP T -> A AC=2;AN=184;BQB=0.566936;DP=2690;DP4=1221,1351,20,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.19171e-20;MQSB=0.948997;RPB=0.996921;SGB=128.058;VDB=0.607333;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q414L|1219|LOC_Os07g09770|protein_coding|CODING|LOC_Os07g09770.1|2|1) FN512-S.SNP.7:5206663 chr07:005206663 0 W/5206663-5206663 FN512-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g09770 retrotransposon protein, putative, unclassified, expressed SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN4231-S.SNP.7:5208327 chr07:005208327 0 W/5208327-5208327 FN4231-S SNP A -> T AC=1;AN=170;BQB=0.616196;DP=2356;DP4=1030,1232,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.19082e-06;MQSB=0.99725;RPB=0.893188;SGB=34.878;VDB=0.590277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K17N|92|LOC_Os07g09780|protein_coding|CODING|LOC_Os07g09780.1|1|1) FN1011-S.SNP.7:5217456 chr07:005217456 0 W/5217456-5217456 FN1011-S Single Base Substitution A-C INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1080-S.SNP.7:5223040 chr07:005223040 0 W/5223040-5223040 FN1080-S Single Base Substitution C-A INTRON HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1058-S.SNP.7:5230408 chr07:005230408 0 W/5230408-5230408 FN1058-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g09830 no apical meristem protein, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2684-S.SNP.7:5237288 chr07:005237288 0 W/5237288-5237288 FN2684-S SNP T -> C AC=1;AN=200;BQB=0.557282;DP=4648;DP4=2243,2261,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17239e-15;MQSB=0.691747;RPB=0.603136;SGB=101.557;VDB=0.865076;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T657|693|LOC_Os07g09850|protein_coding|CODING|LOC_Os07g09850.1|4|1) FN3481-S.SNP.7:5238846 chr07:005238846 0 W/5238846-5238846 FN3481-S SNP G -> C AC=1;AN=184;BQB=0.989758;DP=3152;DP4=1532,1471,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.3417e-11;MQSB=0.681645;RPB=0.471805;SGB=80.3949;VDB=0.405741;EFF=INTRON(MODIFIER||||693|LOC_Os07g09850|protein_coding|CODING|LOC_Os07g09850.1|2|1) FN3909-S.SNP.7:5246761 chr07:005246761 0 W/5246761-5246761 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.733925;DP=2576;DP4=1083,1399,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00310559;MQB=0.325864;MQSB=0.431527;RPB=0.60627;SGB=44.1818;VDB=0.407768;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.7:5253902 chr07:005253902 0 W/5253902-5253902 FN3310-S SNP T -> C AC=1;AN=184;BQB=0.829978;DP=3095;DP4=1567,1391,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.56215e-09;MQSB=0.836682;RPB=0.158269;SGB=56.8786;VDB=0.350238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N78S|381|LOC_Os07g09880|protein_coding|CODING|LOC_Os07g09880.1|1|1) FN1537-S.SNP.7:5259964 chr07:005259964 0 W/5259964-5259964 FN1537-S Single Base Substitution T-C INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN426-S.SNP.7:5271887 chr07:005271887 0 W/5271887-5271887 FN426-S Single Base Substitution G-A INTERGENIC HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN1439-S.SNP.7:5275081 chr07:005275081 0 W/5275081-5275081 FN1439-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN845-S.SNP.7:5275609 chr07:005275609 0 W/5275609-5275609 FN845-S Single Base Substitution T-G INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-234.SNP.7:5282975 chr07:005282975 0 W/5282975-5282975 FN-234 Single Base Substitution A-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3832-S.SNP.7:5291115 chr07:005291115 0 W/5291115-5291115 FN3832-S SNP T -> A AC=1;AN=190;BQB=0.65774;DP=2722;DP4=1456,1059,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=2.63299e-06;MQSB=0.997886;RPB=0.566429;SGB=2.55724;VDB=0.308651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.7:5291268 chr07:005291268 0 W/5291268-5291268 FN2572-S Single Base Substitution G-A INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1734-S.SNP.7:5293606 chr07:005293606 0 W/5293606-5293606 FN1734-S SNP A -> G AC=2;AN=188;BQB=0.751808;DP=1861;DP4=935,858,10,13;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=4.75356e-05;MQSB=0.0722833;RPB=0.0477212;SGB=-11.1967;VDB=0.16129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F94S|321|LOC_Os07g09940|protein_coding|CODING|LOC_Os07g09940.1|1|1) FN1665-S.SNP.7:5293781 chr07:005293781 0 W/5293781-5293781 FN1665-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os07g09940 NBS-LRR resistance protein, putative, expressed SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3653-S.SNP.7:5298233 chr07:005298233 0 W/5298233-5298233 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.971771;DP=3603;DP4=1750,1753,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.0147951;MQSB=3.5543e-08;RPB=0.568089;SGB=26.3271;VDB=0.505181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.7:5306409 chr07:005306409 0 W/5306409-5306409 FN1220-S Single Base Substitution C-T INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN4073-S.SNP.7:5315351 chr07:005315351 0 W/5315351-5315351 FN4073-S SNP C -> A AC=1;AN=182;BQB=0.446086;DP=2901;DP4=1397,1338,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.58061e-05;MQSB=0.933962;RPB=0.873045;SGB=-2.40467;VDB=0.772939;EFF=INTRON(MODIFIER||||207|LOC_Os07g09970|protein_coding|CODING|LOC_Os07g09970.1|1|1) FN885-S.SNP.7:5440798 chr07:005440798 0 W/5440798-5440798 FN885-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g10130 squalene synthetase, putative, expressed SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN2701-S.SNP.7:5466940 chr07:005466940 0 W/5466940-5466940 FN2701-S SNP C -> T AC=2;AN=200;BQB=0.0747773;DP=4180;DP4=1958,1872,16,14;HOB=0.0198;ICB=0.495051;MQ=27;MQ0F=0;MQB=0.345828;MQSB=0.393256;RPB=0.00335561;SGB=-5.84819;VDB=0.0933449;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.7:5474115 chr07:005474115 0 W/5474115-5474115 FN-206 Single Base Substitution G-A INTRON HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2500.SNP.7:5477897 chr07:005477897 0 W/5477897-5477897 FN2500 SNP C -> G AC=1;AN=200;BQB=0.352221;DP=4175;DP4=1805,2140,3,9;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0;MQB=0.00236055;MQSB=0.394405;RPB=0.900825;SGB=49.6594;VDB=0.473679;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.7:5485502 chr07:005485502 0 W/5485502-5485502 FN-335 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g10200 expressed protein SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1268-S.SNP.7:5486645 chr07:005486645 0 W/5486645-5486645 FN1268-S Single Base Substitution G-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3517-S.SNP.7:5489355 chr07:005489355 0 W/5489355-5489355 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.994111;DP=2992;DP4=1640,1261,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.74346e-07;MQSB=0.994231;RPB=0.42711;SGB=48.979;VDB=0.316685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN-163 Single Base Substitution C-T INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-218.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN-218 Single Base Substitution C-T INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-272.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN-272 Single Base Substitution C-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1746-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN1746-S SNP C -> T AC=2;AN=188;BQB=0.962199;DP=2536;DP4=1671,808,18,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.64881e-12;MQSB=0.986003;RPB=0.81666;SGB=-9.56681;VDB=0.521862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN3830-S SNP C -> T AC=2;AN=190;BQB=0.996192;DP=2929;DP4=1318,1480,15,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.72104e-16;MQSB=0.994245;RPB=0.651764;SGB=149.281;VDB=0.760875;EFF=INTERGENIC(MODIFIER||||||||||1) FN4121-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN4121-S SNP C -> T AC=2;AN=182;BQB=0.996003;DP=3056;DP4=1468,1494,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.78502e-14;MQSB=0.980951;RPB=0.445673;SGB=102.753;VDB=0.181026;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN598-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN598-S Single Base Substitution C-T INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN895-S.SNP.7:5490354 chr07:005490354 0 W/5490354-5490354 FN895-S Single Base Substitution C-T INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1568-S.SNP.7:5491073 chr07:005491073 0 W/5491073-5491073 FN1568-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g10220 anthocyanidin 3-O-glucosyltransferase, putative, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2742-S.SNP.7:5495329 chr07:005495329 0 W/5495329-5495329 FN2742-S SNP C -> A AC=1;AN=200;BQB=0.891607;DP=4248;DP4=2102,1918,12,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.33527e-07;MQSB=0.716429;RPB=0.665708;SGB=61.9006;VDB=0.639751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.7:5504914 chr07:005504914 0 W/5504914-5504914 FN1638-S Single Base Substitution G-A INTRON Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN4074-S.SNP.7:5509325 chr07:005509325 0 W/5509325-5509325 FN4074-S SNP A -> G AC=1;AN=182;BQB=0.971975;DP=3122;DP4=1441,1580,10,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.05702e-14;MQSB=0.991058;RPB=0.995171;SGB=40.7201;VDB=0.907106;EFF=INTRON(MODIFIER||||183|LOC_Os07g10256|protein_coding|CODING|LOC_Os07g10256.1|1|1) FN1346-S.SNP.7:5509583 chr07:005509583 0 W/5509583-5509583 FN1346-S Single Base Substitution C-G INTRON HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. 707-7.SNP.7:5511245 chr07:005511245 0 W/5511245-5511245 707-7 Single Base Substitution G-A INTERGENIC Homo SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN2401.SNP.7:5514669 chr07:005514669 0 W/5514669-5514669 FN2401 SNP T -> C AC=2;AN=200;BQB=0.558071;DP=4622;DP4=2056,2131,28,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.97479e-28;MQSB=0.80917;RPB=0.999353;SGB=72.0916;VDB=0.669726;EFF=INTRON(MODIFIER||||110|LOC_Os07g10270|protein_coding|CODING|LOC_Os07g10270.1|1|1) FN-85.SNP.7:5514883 chr07:005514883 0 W/5514883-5514883 FN-85 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g10270 hypothetical protein SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN459-S.SNP.7:5521748 chr07:005521748 0 W/5521748-5521748 FN459-S Single Base Substitution C-G UTR_5_PRIME HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN631-S.SNP.7:5522283 chr07:005522283 0 W/5522283-5522283 FN631-S Single Base Substitution C-T INTRON HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2337.SNP.7:5530132 chr07:005530132 0 W/5530132-5530132 FN2337 SNP T -> C AC=1;AN=192;BQB=0.34597;DP=4990;DP4=2509,2197,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.73214e-11;MQSB=0.960292;RPB=0.963124;SGB=41.7357;VDB=0.857845;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.7:5532845 chr07:005532845 0 W/5532845-5532845 FN-277 Single Base Substitution T-C INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN576-S.SNP.7:5539266 chr07:005539266 0 W/5539266-5539266 FN576-S Single Base Substitution A-C INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN229-S.SNP.7:5543595 chr07:005543595 0 W/5543595-5543595 FN229-S Single Base Substitution A-G INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2141-S.SNP.7:5545863 chr07:005545863 0 W/5545863-5545863 FN2141-S SNP A -> G AC=2;AN=168;BQB=0.194925;DP=4019;DP4=1872,2074,28,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.92502e-19;MQSB=0.999997;RPB=0.133443;SGB=-229.993;VDB=0.96883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.7:5553100 chr07:005553100 0 W/5553100-5553100 FN3918-S SNP G -> A AC=1;AN=158;BQB=0.989464;DP=2519;DP4=1400,1016,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.03727e-09;MQSB=0.956401;RPB=0.799535;SGB=55.806;VDB=0.214264;EFF=INTRON(MODIFIER||||883|LOC_Os07g10350|protein_coding|CODING|LOC_Os07g10350.1|4|1) FN2657-S.SNP.7:5554353 chr07:005554353 0 W/5554353-5554353 FN2657-S SNP T -> C AC=1;AN=200;BQB=0.791502;DP=4872;DP4=2293,2397,11,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02619e-18;MQSB=0.892109;RPB=0.997643;SGB=81.5883;VDB=0.868064;EFF=INTRON(MODIFIER||||883|LOC_Os07g10350|protein_coding|CODING|LOC_Os07g10350.1|8|1) FN2217-S.SNP.7:5557176 chr07:005557176 0 W/5557176-5557176 FN2217-S SNP T -> C AC=1;AN=190;BQB=0.801226;DP=4687;DP4=2249,2215,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000420044;MQSB=0.628183;RPB=0.862239;SGB=30.8803;VDB=0.208567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.7:5566719 chr07:005566719 0 W/5566719-5566719 FN2620-S SNP T -> A AC=2;AN=198;BQB=0.697819;DP=3428;DP4=1373,1693,27,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.38245e-27;MQSB=0.417716;RPB=0.680057;SGB=236.962;VDB=0.75257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V15E|154|LOC_Os07g10380|protein_coding|CODING|LOC_Os07g10380.1|1|1) FN755-S.SNP.7:5567874 chr07:005567874 0 W/5567874-5567874 FN755-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-295.SNP.7:5569715 chr07:005569715 0 W/5569715-5569715 FN-295 Single Base Substitution A-G INTRON HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN462-S.SNP.7:5572464 chr07:005572464 0 W/5572464-5572464 FN462-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g10390 cleavage and polyadenylation specificity factor, putative, expressed SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN666-S.SNP.7:5578623 chr07:005578623 0 W/5578623-5578623 FN666-S Single Base Substitution A-G INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2445.SNP.7:5587852 chr07:005587852 0 W/5587852-5587852 FN2445 SNP A -> G AC=1;AN=200;BQB=0.283489;DP=4696;DP4=2057,2315,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212947;MQB=8.03972e-07;MQSB=0.822532;RPB=0.816291;SGB=40.2696;VDB=0.131699;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.7:5588487 chr07:005588487 0 W/5588487-5588487 FN1050-S Single Base Substitution C-T INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1050-S.SNP.7:5588490 chr07:005588490 0 W/5588490-5588490 FN1050-S Single Base Substitution C-A INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1050-S.SNP.7:5588491 chr07:005588491 0 W/5588491-5588491 FN1050-S Single Base Substitution C-T INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN4063-S.SNP.7:5588797 chr07:005588797 0 W/5588797-5588797 FN4063-S SNP T -> C AC=1;AN=168;BQB=0.991995;DP=1949;DP4=757,891,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.00546775;MQSB=0.00338069;RPB=0.940711;SGB=21.0249;VDB=0.617041;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.7:5589332 chr07:005589332 0 W/5589332-5589332 FN-85 Single Base Substitution G-C INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2158-S.SNP.7:5591083 chr07:005591083 0 W/5591083-5591083 FN2158-S SNP T -> C AC=1;AN=168;BQB=0.13929;DP=3099;DP4=1664,1393,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08595e-06;MQSB=0.902075;RPB=0.768789;SGB=-16.665;VDB=0.131318;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.7:5592825 chr07:005592825 0 W/5592825-5592825 FN859-S Single Base Substitution G-A INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1399-S.SNP.7:5596912 chr07:005596912 0 W/5596912-5596912 FN1399-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-163.SNP.7:5598667 chr07:005598667 0 W/5598667-5598667 FN-163 Single Base Substitution A-C UTR_5_PRIME HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN1748-S.SNP.7:5604026 chr07:005604026 0 W/5604026-5604026 FN1748-S SNP T -> C AC=2;AN=188;BQB=0.942095;DP=4012;DP4=1901,2048,21,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.25419e-15;MQSB=0.999992;RPB=0.169253;SGB=-44.6718;VDB=0.0628368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.7:5605185 chr07:005605185 0 W/5605185-5605185 FN2471 SNP T -> C AC=1;AN=200;BQB=0.9571;DP=4805;DP4=2297,2264,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06613e-19;MQSB=0.962647;RPB=0.750044;SGB=137.158;VDB=0.891196;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.7:5613274 chr07:005613274 0 W/5613274-5613274 FN756-S Single Base Substitution C-T INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2547-S.SNP.7:5613518 chr07:005613518 0 W/5613518-5613518 FN2547-S SNP T -> A AC=1;AN=198;BQB=0.84286;DP=4035;DP4=2046,1805,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.76466e-07;MQSB=0.998329;RPB=0.667272;SGB=36.5539;VDB=0.35295;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.7:5627678 chr07:005627678 0 W/5627678-5627678 FN2262-S SNP C -> T AC=1;AN=190;BQB=0.804782;DP=4855;DP4=2318,2195,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.11356e-05;MQSB=0.71541;RPB=0.858641;SGB=31.3213;VDB=0.80973;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.7:5635559 chr07:005635559 0 W/5635559-5635559 FN-234 Single Base Substitution C-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3294-S.SNP.7:5637561 chr07:005637561 0 W/5637561-5637561 FN3294-S SNP T -> C AC=1;AN=184;BQB=0.979752;DP=3290;DP4=1459,1707,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49647e-08;MQSB=0.96702;RPB=0.511975;SGB=35.7479;VDB=0.71365;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.7:5637664 chr07:005637664 0 W/5637664-5637664 FN-164 Single Base Substitution C-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN3859-S.SNP.7:5641495 chr07:005641495 0 W/5641495-5641495 FN3859-S SNP T -> C AC=2;AN=158;BQB=0.816475;DP=2322;DP4=1101,1125,8,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.65153e-08;MQSB=0.919508;RPB=0.933223;SGB=68.9144;VDB=0.451694;EFF=INTRON(MODIFIER||||53|LOC_Os07g10480|protein_coding|CODING|LOC_Os07g10480.1|2|1) FN3905-S.SNP.7:5646876 chr07:005646876 0 W/5646876-5646876 FN3905-S SNP G -> A AC=2;AN=158;BQB=0.852552;DP=2512;DP4=1116,1287,9,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.40392e-09;MQSB=0.854195;RPB=0.618268;SGB=54.2901;VDB=0.967459;EFF=INTRON(MODIFIER||||578|LOC_Os07g10490|protein_coding|CODING|LOC_Os07g10490.1|3|1) FN1651-S.SNP.7:5651941 chr07:005651941 0 W/5651941-5651941 FN1651-S Single Base Substitution C-T INTERGENIC Homo SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2211-S.SNP.7:5674973 chr07:005674973 0 W/5674973-5674973 FN2211-S SNP T -> G AC=1;AN=190;BQB=0.812187;DP=4142;DP4=1893,1786,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.3031e-10;MQSB=0.702894;RPB=0.946287;SGB=16.5421;VDB=0.100192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.7:5676196 chr07:005676196 0 W/5676196-5676196 FN1736-S SNP G -> A AC=1;AN=188;BQB=0.135018;DP=3828;DP4=1884,1903,16,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.02825e-13;MQSB=0.995327;RPB=0.690306;SGB=-77.9263;VDB=0.428789;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.7:5677114 chr07:005677114 0 W/5677114-5677114 FN596-S Single Base Substitution C-T INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1460-S.SNP.7:5678098 chr07:005678098 0 W/5678098-5678098 FN1460-S Single Base Substitution C-T INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3827-S.SNP.7:5680993 chr07:005680993 0 W/5680993-5680993 FN3827-S SNP A -> G AC=1;AN=190;BQB=0.974518;DP=3063;DP4=1637,1303,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.89013e-11;MQSB=0.760762;RPB=0.641448;SGB=41.5369;VDB=0.859103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.7:5684305 chr07:005684305 0 W/5684305-5684305 FN2628-S SNP T -> C AC=2;AN=200;BQB=0.726753;DP=5092;DP4=2288,2509,24,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.66023e-36;MQSB=0.915779;RPB=0.980417;SGB=14.1224;VDB=0.943263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I281T|408|LOC_Os07g10530|protein_coding|CODING|LOC_Os07g10530.1|6|1) FN-349.SNP.7:5686849 chr07:005686849 0 W/5686849-5686849 FN-349 Single Base Substitution C-T INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN3674-S.SNP.7:5686849 chr07:005686849 0 W/5686849-5686849 FN3674-S SNP C -> T AC=2;AN=190;BQB=0.469615;DP=3122;DP4=1528,1418,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.44292e-13;MQSB=0.836617;RPB=0.91926;SGB=21.2038;VDB=0.741928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.7:5689086 chr07:005689086 0 W/5689086-5689086 FN1572-S Single Base Substitution T-G INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1237-S.SNP.7:5689392 chr07:005689392 0 W/5689392-5689392 FN1237-S Single Base Substitution A-G INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1237-S.SNP.7:5689395 chr07:005689395 0 W/5689395-5689395 FN1237-S Single Base Substitution A-T INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1327-S.SNP.7:5700379 chr07:005700379 0 W/5700379-5700379 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2240-S.SNP.7:5710030 chr07:005710030 0 W/5710030-5710030 FN2240-S SNP A -> T AC=1;AN=190;BQB=0.966525;DP=4843;DP4=2158,2358,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.84178e-07;MQSB=0.930494;RPB=0.94642;SGB=39.6545;VDB=0.349811;EFF=INTRON(MODIFIER||||1066|LOC_Os07g10550|protein_coding|CODING|LOC_Os07g10550.1|3|1) FN2240-S.SNP.7:5710031 chr07:005710031 0 W/5710031-5710031 FN2240-S SNP A -> T AC=1;AN=190;BQB=0.999876;DP=4853;DP4=2106,2376,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.1162e-09;MQSB=0.805296;RPB=0.887557;SGB=21.1058;VDB=0.273871;EFF=INTRON(MODIFIER||||1066|LOC_Os07g10550|protein_coding|CODING|LOC_Os07g10550.1|3|1) FN840-S.SNP.7:5710169 chr07:005710169 0 W/5710169-5710169 FN840-S Single Base Substitution A-T INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN840-S.SNP.7:5710170 chr07:005710170 0 W/5710170-5710170 FN840-S Single Base Substitution G-A INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN628-S.SNP.7:5716352 chr07:005716352 0 W/5716352-5716352 FN628-S Single Base Substitution C-T INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN722-S.SNP.7:5718351 chr07:005718351 0 W/5718351-5718351 FN722-S Single Base Substitution C-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2180-S.SNP.7:5719195 chr07:005719195 0 W/5719195-5719195 FN2180-S SNP G -> A AC=1;AN=190;BQB=0.00273705;DP=3892;DP4=1635,1890,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00334018;MQB=1.74637e-06;MQSB=0.187217;RPB=0.236478;SGB=-12.1142;VDB=0.17126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.7:5732855 chr07:005732855 0 W/5732855-5732855 FN2316 SNP G -> T AC=2;AN=192;BQB=0.819924;DP=5319;DP4=2534,2387,35,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.39042e-27;MQSB=0.996014;RPB=0.809967;SGB=-56.2391;VDB=0.824702;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.7:5737207 chr07:005737207 0 W/5737207-5737207 FN4129-S SNP T -> C AC=2;AN=182;BQB=0.996163;DP=2787;DP4=1368,1349,5,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.25968e-10;MQSB=0.918153;RPB=0.988313;SGB=71.1765;VDB=0.0498624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S91P|156|LOC_Os07g10570|protein_coding|CODING|LOC_Os07g10570.1|1|1) FN2180-S.SNP.7:5739402 chr07:005739402 0 W/5739402-5739402 FN2180-S SNP A -> G AC=1;AN=190;BQB=0.993759;DP=4812;DP4=2169,2311,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60344e-12;MQSB=0.928561;RPB=0.979787;SGB=68.0854;VDB=0.78529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.7:5740516 chr07:005740516 0 W/5740516-5740516 FN3411-S SNP T -> G AC=2;AN=184;BQB=0.418105;DP=1945;DP4=1373,212,14,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.88852e-07;MQSB=0.0807553;RPB=0.969463;SGB=-36.2304;VDB=0.981763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.7:5740579 chr07:005740579 0 W/5740579-5740579 FN1369-S Single Base Substitution C-T INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN761-S.SNP.7:5745879 chr07:005745879 0 W/5745879-5745879 FN761-S Single Base Substitution T-A INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3381-S.SNP.7:5757402 chr07:005757402 0 W/5757402-5757402 FN3381-S SNP A -> T AC=1;AN=184;BQB=0.968361;DP=2262;DP4=1235,940,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.80522e-06;MQSB=0.92301;RPB=0.328211;SGB=28.7043;VDB=0.563266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.7:5761528 chr07:005761528 0 W/5761528-5761528 FN2457 SNP A -> G AC=2;AN=200;BQB=0.914229;DP=5418;DP4=3066,1998,30,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.75289e-31;MQSB=0.906243;RPB=0.386895;SGB=180.871;VDB=0.63869;EFF=INTERGENIC(MODIFIER||||||||||1) FN803-S.SNP.7:5763231 chr07:005763231 0 W/5763231-5763231 FN803-S Single Base Substitution A-C INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN_770-6-1.SNP.7:5775516 chr07:005775516 0 W/5775516-5775516 FN_770-6-1 Single Base Substitution G-A HET LOC_Os07g10630 expressed protein SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2491.SNP.7:5775687 chr07:005775687 0 W/5775687-5775687 FN2491 SNP C -> T AC=2;AN=200;BQB=0.909426;DP=4167;DP4=1952,1935,11,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56306e-11;MQSB=0.837798;RPB=0.345532;SGB=91.1059;VDB=0.822685;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G526E|900|LOC_Os07g10630|protein_coding|CODING|LOC_Os07g10630.1|1|1) FN-200.SNP.7:5786796 chr07:005786796 0 W/5786796-5786796 FN-200 Single Base Substitution C-A INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN2659-S.SNP.7:5789409 chr07:005789409 0 W/5789409-5789409 FN2659-S SNP T -> C AC=1;AN=200;BQB=0.159272;DP=4479;DP4=1917,2420,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.07606e-08;MQSB=0.541612;RPB=0.941154;SGB=54.6902;VDB=0.0242974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.7:5791486 chr07:005791486 0 W/5791486-5791486 FN2566-S SNP G -> A AC=1;AN=198;BQB=0.940247;DP=4241;DP4=2005,1981,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.11032e-06;MQSB=0.996362;RPB=0.995421;SGB=16.3688;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.7:5798469 chr07:005798469 0 W/5798469-5798469 FN2358 SNP A -> G AC=1;AN=192;BQB=0.941036;DP=4831;DP4=2368,1985,21,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.47177e-13;MQSB=0.343361;RPB=0.99997;SGB=-117.852;VDB=0.532015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.7:5808453 chr07:005808453 0 W/5808453-5808453 FN1624-S Single Base Substitution A-G INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN_769-4-1.SNP.7:5812994 chr07:005812994 0 W/5812994-5812994 FN_769-4-1 Single Base Substitution C-A HET LOC_Os07g10700 polygalacturonase, putative, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN859-S.SNP.7:5819392 chr07:005819392 0 W/5819392-5819392 FN859-S Single Base Substitution G-A INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1421-S.SNP.7:5849558 chr07:005849558 0 W/5849558-5849558 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN4271-S.SNP.7:5860634 chr07:005860634 0 W/5860634-5860634 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.82778;DP=2579;DP4=1299,1183,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.12037e-05;MQSB=0.979528;RPB=0.942097;SGB=31.4354;VDB=0.836021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.7:5873087 chr07:005873087 0 W/5873087-5873087 FN1623-S Single Base Substitution A-T INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2774-S.SNP.7:5876210 chr07:005876210 0 W/5876210-5876210 FN2774-S SNP C -> A AC=1;AN=198;BQB=0.998808;DP=4400;DP4=2112,2013,11,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.40304e-09;MQSB=0.925626;RPB=0.81914;SGB=40.149;VDB=0.0447996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.7:5877239 chr07:005877239 0 W/5877239-5877239 FN2595-S SNP C -> T AC=1;AN=198;BQB=0.235663;DP=3407;DP4=1444,1555,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.24229e-05;MQSB=0.86057;RPB=0.998859;SGB=18.9639;VDB=0.337089;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H89|368|LOC_Os07g10810|protein_coding|CODING|LOC_Os07g10810.1|1|1) FN1277-S.SNP.7:5877771 chr07:005877771 0 W/5877771-5877771 FN1277-S Single Base Substitution T-C INTRON HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2607-S.SNP.7:5879670 chr07:005879670 0 W/5879670-5879670 FN2607-S SNP G -> A AC=2;AN=198;BQB=0.992399;DP=4059;DP4=2003,1881,11,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.20804e-13;MQSB=0.999253;RPB=0.998203;SGB=65.3149;VDB=0.350385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R326Q|368|LOC_Os07g10810|protein_coding|CODING|LOC_Os07g10810.1|5|1) FN3901-S.SNP.7:5891166 chr07:005891166 0 W/5891166-5891166 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.834643;DP=1982;DP4=814,1048,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.32684e-06;MQSB=0.626757;RPB=0.390777;SGB=38.3284;VDB=0.610755;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A669|763|LOC_Os07g10840|protein_coding|CODING|LOC_Os07g10840.1|8|1) FN500-S.SNP.7:5893720 chr07:005893720 0 W/5893720-5893720 FN500-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g10840 uncharacterized glycosyltransferase, putative, expressed SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1179-S.SNP.7:5894409 chr07:005894409 0 W/5894409-5894409 FN1179-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3738-S.SNP.7:5895850 chr07:005895850 0 W/5895850-5895850 FN3738-S SNP G -> T AC=2;AN=190;BQB=0.515669;DP=2510;DP4=1483,921,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.89617e-09;MQSB=0.324274;RPB=0.852156;SGB=71.6393;VDB=0.695743;EFF=INTERGENIC(MODIFIER||||||||||1) FN1734-S.SNP.7:5897496 chr07:005897496 0 W/5897496-5897496 FN1734-S SNP T -> A AC=2;AN=188;BQB=0.538695;DP=3698;DP4=1965,1693,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.56797e-17;MQSB=0.921502;RPB=0.940515;SGB=85.5904;VDB=0.351365;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.7:5897685 chr07:005897685 0 W/5897685-5897685 FN-212 Single Base Substitution T-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3434-S.SNP.7:5904086 chr07:005904086 0 W/5904086-5904086 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.936284;DP=3060;DP4=1100,1839,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.2863e-08;MQSB=0.162626;RPB=0.9963;SGB=56.8786;VDB=0.924143;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.7:5905056 chr07:005905056 0 W/5905056-5905056 FN1065-S Single Base Substitution A-C INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1065-S.SNP.7:5905057 chr07:005905057 0 W/5905057-5905057 FN1065-S Single Base Substitution C-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1209-S.SNP.7:5906560 chr07:005906560 0 W/5906560-5906560 FN1209-S Single Base Substitution A-T INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1301-S.SNP.7:5907655 chr07:005907655 0 W/5907655-5907655 FN1301-S Single Base Substitution G-A INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4075-S.SNP.7:5907831 chr07:005907831 0 W/5907831-5907831 FN4075-S SNP C -> T AC=1;AN=182;BQB=0.967712;DP=2914;DP4=1427,1437,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.54952e-07;MQSB=0.879549;RPB=0.343136;SGB=44.1115;VDB=0.373797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.7:5910604 chr07:005910604 0 W/5910604-5910604 FN3769-S SNP A -> T AC=2;AN=190;BQB=0.660125;DP=2336;DP4=1167,1077,10,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.71666e-10;MQSB=0.997151;RPB=0.602252;SGB=28.7675;VDB=0.093894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.7:5910605 chr07:005910605 0 W/5910605-5910605 FN3769-S SNP A -> T AC=2;AN=190;BQB=0.947345;DP=2322;DP4=1144,1054,10,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.98486e-10;MQSB=0.99691;RPB=0.47208;SGB=50.3161;VDB=0.0889505;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.7:5920690 chr07:005920690 0 W/5920690-5920690 FN_543-2-6 Single Base Substitution C-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN-27.SNP.7:5927618 chr07:005927618 0 W/5927618-5927618 FN-27 Single Base Substitution T-G INTERGENIC Homo SNo: 27, Mutant_ID: FN-27, Generation: M2, Mutations: 30, Genes: 57, Seed availability: Yes. FN2677-S.SNP.7:5927626 chr07:005927626 0 W/5927626-5927626 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.897103;DP=3657;DP4=1991,1311,13,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.67193e-05;MQSB=0.00286219;RPB=0.99775;SGB=51.0851;VDB=0.613291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.7:5934798 chr07:005934798 0 W/5934798-5934798 FN-212 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g10860 expressed protein SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2731-S.SNP.7:5942182 chr07:005942182 0 W/5942182-5942182 FN2731-S SNP A -> G AC=1;AN=200;BQB=0.0310139;DP=5223;DP4=2440,2588,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.79253e-12;MQSB=0.991749;RPB=0.991863;SGB=12.7003;VDB=0.950582;EFF=INTRON(MODIFIER||||158|LOC_Os07g10870|protein_coding|CODING|LOC_Os07g10870.1|1|1) FN3676-S.SNP.7:5942608 chr07:005942608 0 W/5942608-5942608 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.259704;DP=2784;DP4=1388,1296,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.62607e-06;MQSB=0.430053;RPB=0.773351;SGB=-17.0991;VDB=0.83435;EFF=INTRON(MODIFIER||||158|LOC_Os07g10870|protein_coding|CODING|LOC_Os07g10870.1|1|1) FN1046-S.SNP.7:5951050 chr07:005951050 0 W/5951050-5951050 FN1046-S Single Base Substitution C-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN978-S.SNP.7:5951715 chr07:005951715 0 W/5951715-5951715 FN978-S Single Base Substitution C-T INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3426-S.SNP.7:5959740 chr07:005959740 0 W/5959740-5959740 FN3426-S SNP C -> G AC=1;AN=184;BQB=0.999188;DP=3687;DP4=1774,1835,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28456e-08;MQSB=0.353755;RPB=0.7354;SGB=42.7914;VDB=0.689492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.7:5963369 chr07:005963369 0 W/5963369-5963369 FN3838-S SNP T -> C AC=1;AN=190;BQB=0.97743;DP=2415;DP4=1058,1299,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12645e-05;MQSB=0.365869;RPB=0.718754;SGB=30.8803;VDB=0.461975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T3A|499|LOC_Os07g10900|protein_coding|CODING|LOC_Os07g10900.1|1|1) FN919-S.SNP.7:5965408 chr07:005965408 0 W/5965408-5965408 FN919-S Single Base Substitution A-C INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3580-S.SNP.7:5969246 chr07:005969246 0 W/5969246-5969246 FN3580-S SNP A -> T AC=1;AN=188;BQB=0.265674;DP=2800;DP4=1245,1481,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000222879;MQSB=0.993911;RPB=0.567689;SGB=53.5223;VDB=0.10358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.7:5969563 chr07:005969563 0 W/5969563-5969563 FN3339-S SNP T -> C AC=1;AN=184;BQB=0.919204;DP=2809;DP4=1282,1399,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07433e-07;MQSB=0.99026;RPB=0.962322;SGB=28.7043;VDB=0.695687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-315.SNP.7:5973416 chr07:005973416 0 W/5973416-5973416 FN-315 Single Base Substitution T-G INTRON HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN983-S.SNP.7:5975317 chr07:005975317 0 W/5975317-5975317 FN983-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g10910 ATEXO70F1, putative, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2705-S.SNP.7:5977639 chr07:005977639 0 W/5977639-5977639 FN2705-S SNP C -> A AC=1;AN=200;BQB=0.412491;DP=4620;DP4=2288,2119,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75745e-10;MQSB=0.984566;RPB=0.981825;SGB=77.2904;VDB=0.532093;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V154|320|LOC_Os07g10920|protein_coding|CODING|LOC_Os07g10920.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V154|320|LOC_Os07g10920|protein_coding|CODING|LOC_Os07g10920.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V154|320|LOC_Os07g10920|protein_coding|CODING|LOC_Os07g10920.4|1|1),SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V154|320|LOC_Os07g10920|protein_coding|CODING|LOC_Os07g10920.1|1|1) FN2631-S.SNP.7:5980918 chr07:005980918 0 W/5980918-5980918 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.979017;DP=5017;DP4=2470,2285,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.49339e-12;MQSB=0.999528;RPB=0.857376;SGB=37.3004;VDB=0.0904733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.7:5981161 chr07:005981161 0 W/5981161-5981161 FN3551-S SNP G -> A AC=1;AN=188;BQB=0.882837;DP=2704;DP4=1473,1185,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.53993e-05;MQSB=0.785126;RPB=0.634741;SGB=26.2637;VDB=0.7368;EFF=INTERGENIC(MODIFIER||||||||||1) FN-72.SNP.7:5987168 chr07:005987168 0 W/5987168-5987168 FN-72 Single Base Substitution C-T INTERGENIC HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2202-S.SNP.7:5988897 chr07:005988897 0 W/5988897-5988897 FN2202-S SNP T -> C AC=1;AN=190;BQB=0.193526;DP=3836;DP4=982,2630,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000521376;MQB=2.24194e-05;MQSB=0.770806;RPB=0.0855711;SGB=25.439;VDB=0.0891754;EFF=INTRON(MODIFIER||||709|LOC_Os07g10940|protein_coding|CODING|LOC_Os07g10940.1|1|1) FN742-S.SNP.7:5988991 chr07:005988991 0 W/5988991-5988991 FN742-S Single Base Substitution C-T INTRON HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1536-S.SNP.7:5990810 chr07:005990810 0 W/5990810-5990810 FN1536-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g10940 exo70 exocyst complex subunit family protein, expressed SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN1236-S.SNP.7:5991352 chr07:005991352 0 W/5991352-5991352 FN1236-S Single Base Substitution C-T INTRON HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2626-S.SNP.7:5992485 chr07:005992485 0 W/5992485-5992485 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.997605;DP=4731;DP4=2367,1938,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76827e-05;MQSB=0.726066;RPB=0.736432;SGB=25.849;VDB=0.397567;EFF=INTRON(MODIFIER||||709|LOC_Os07g10940|protein_coding|CODING|LOC_Os07g10940.1|4|1) FN974-S.SNP.7:5997160 chr07:005997160 0 W/5997160-5997160 FN974-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g10940 exo70 exocyst complex subunit family protein, expressed SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN4148-S.SNP.7:6004073 chr07:006004073 0 W/6004073-6004073 FN4148-S SNP G -> A AC=1;AN=170;BQB=0.912845;DP=2584;DP4=1363,1153,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.48168e-05;MQSB=0.999788;RPB=0.468631;SGB=38.987;VDB=0.324775;EFF=INTRON(MODIFIER||||478|LOC_Os07g10950|protein_coding|CODING|LOC_Os07g10950.1|1|1) FN3566-S.SNP.7:6005862 chr07:006005862 0 W/6005862-6005862 FN3566-S SNP T -> C AC=2;AN=188;BQB=0.910139;DP=2584;DP4=1156,1290,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.25757e-18;MQSB=0.98738;RPB=0.126144;SGB=103.307;VDB=0.0953835;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.7:6006704 chr07:006006704 0 W/6006704-6006704 FN_552-1-1 Single Base Substitution T-C Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN888-S.SNP.7:6012444 chr07:006012444 0 W/6012444-6012444 FN888-S Single Base Substitution G-A INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3373-S.SNP.7:6022004 chr07:006022004 0 W/6022004-6022004 FN3373-S SNP G -> A AC=1;AN=184;BQB=0.932835;DP=2836;DP4=1547,1214,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000253734;MQSB=0.999615;RPB=0.683031;SGB=32.2261;VDB=0.592422;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.7:6022873 chr07:006022873 0 W/6022873-6022873 FN_807-3-1 Single Base Substitution A-T Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2758-S.SNP.7:6023317 chr07:006023317 0 W/6023317-6023317 FN2758-S SNP G -> C AC=1;AN=200;BQB=0.994679;DP=4941;DP4=2036,2551,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.3363e-11;MQSB=0.971496;RPB=0.967726;SGB=77.2904;VDB=0.0502076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.7:6024437 chr07:006024437 0 W/6024437-6024437 FN3662-S SNP T -> C AC=1;AN=190;BQB=0.860264;DP=2500;DP4=1558,852,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18601e-06;MQSB=0.798381;RPB=0.621448;SGB=35.4339;VDB=0.191968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.7:6025689 chr07:006025689 0 W/6025689-6025689 FN1379-S Single Base Substitution A-G INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN_827-1.SNP.7:6032059 chr07:006032059 0 W/6032059-6032059 FN_827-1 Single Base Substitution G-A HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN3357-S.SNP.7:6042191 chr07:006042191 0 W/6042191-6042191 FN3357-S SNP T -> C AC=1;AN=184;BQB=0.965036;DP=2875;DP4=1431,1335,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06223e-06;MQSB=0.964162;RPB=0.977767;SGB=39.699;VDB=0.633776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S744P|1274|LOC_Os07g11000|protein_coding|CODING|LOC_Os07g11000.1|10|1) FN1463-S.SNP.7:6048921 chr07:006048921 0 W/6048921-6048921 FN1463-S Single Base Substitution A-T INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN588-S.SNP.7:6049359 chr07:006049359 0 W/6049359-6049359 FN588-S Single Base Substitution A-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN588-S.SNP.7:6049360 chr07:006049360 0 W/6049360-6049360 FN588-S Single Base Substitution G-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN566-S.SNP.7:6049735 chr07:006049735 0 W/6049735-6049735 FN566-S Single Base Substitution C-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-183.SNP.7:6051024 chr07:006051024 0 W/6051024-6051024 FN-183 Single Base Substitution A-G INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN2649-S.SNP.7:6061405 chr07:006061405 0 W/6061405-6061405 FN2649-S SNP A -> T AC=1;AN=200;BQB=0.876901;DP=4730;DP4=2557,1999,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2134e-14;MQSB=0.986264;RPB=0.938274;SGB=100.316;VDB=0.663623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.7:6065753 chr07:006065753 0 W/6065753-6065753 FN2320 SNP C -> T AC=1;AN=192;BQB=0.979395;DP=5295;DP4=2393,2432,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.42744e-10;MQSB=0.988581;RPB=0.998123;SGB=71.8591;VDB=0.4648;EFF=INTRON(MODIFIER||||473|LOC_Os07g11020|protein_coding|CODING|LOC_Os07g11020.1|2|1) FN2687-S.SNP.7:6069413 chr07:006069413 0 W/6069413-6069413 FN2687-S SNP A -> G AC=1;AN=200;BQB=0.999956;DP=5172;DP4=2807,2121,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.04758e-14;MQSB=0.956313;RPB=0.75557;SGB=72.7161;VDB=0.0297247;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.7:6072051 chr07:006072051 0 W/6072051-6072051 FN1635-S SNP T -> A AC=1;AN=188;BQB=0.93026;DP=2693;DP4=1659,1019,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.0932046;MQB=0.656285;MQSB=0;RPB=0.621287;SGB=21.8113;VDB=0.0326276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.7:6077022 chr07:006077022 0 W/6077022-6077022 FN2781-S SNP T -> C AC=2;AN=198;BQB=0.427208;DP=2023;DP4=1527,263,23,2;HOB=0.019998;ICB=0.495001;MQ=37;MQ0F=0.0148295;MQB=0.0821913;MQSB=0.700898;RPB=0.996962;SGB=50.1053;VDB=0.641508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D70G|1159|LOC_Os07g11030|protein_coding|CODING|LOC_Os07g11030.1|1|1) FN992-S.SNP.7:6082833 chr07:006082833 0 W/6082833-6082833 FN992-S Single Base Substitution G-A INTERGENIC HOMO SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN2289.SNP.7:6085398 chr07:006085398 0 W/6085398-6085398 FN2289 SNP A -> G AC=2;AN=192;BQB=0.986785;DP=4380;DP4=1812,2345,19,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.19776e-18;MQSB=0.962668;RPB=0.136964;SGB=114.631;VDB=0.0799764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.7:6085826 chr07:006085826 0 W/6085826-6085826 FN1451-S Single Base Substitution A-T INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2678-S.SNP.7:6087038 chr07:006087038 0 W/6087038-6087038 FN2678-S SNP A -> C AC=1;AN=200;BQB=0.985495;DP=4963;DP4=2518,2228,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14872e-10;MQSB=0.905765;RPB=0.901288;SGB=47.4799;VDB=0.649897;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.7:6088138 chr07:006088138 0 W/6088138-6088138 FN898-S Single Base Substitution C-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3840-S.SNP.7:6104315 chr07:006104315 0 W/6104315-6104315 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.115081;DP=2568;DP4=1145,1090,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.13712e-05;MQSB=0.974157;RPB=0.0200576;SGB=-76.5294;VDB=0.0852973;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.7:6111758 chr07:006111758 0 W/6111758-6111758 FN3666-S SNP C -> T AC=1;AN=190;BQB=0.944176;DP=2670;DP4=1337,1230,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01499e-10;MQSB=0.996454;RPB=0.333956;SGB=67.3108;VDB=0.197212;EFF=INTRON(MODIFIER||||356|LOC_Os07g11060|protein_coding|CODING|LOC_Os07g11060.1|4|1),INTRON(MODIFIER||||285|LOC_Os07g11060|protein_coding|CODING|LOC_Os07g11060.2|3|1) FN3949-S.SNP.7:6119838 chr07:006119838 0 W/6119838-6119838 FN3949-S SNP T -> C AC=1;AN=168;BQB=0.955521;DP=2729;DP4=1159,1460,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.55041e-11;MQSB=0.929079;RPB=0.198918;SGB=36.7696;VDB=0.45121;EFF=SPLICE_SITE_REGION(LOW||||737|LOC_Os07g11070|protein_coding|CODING|LOC_Os07g11070.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G342|737|LOC_Os07g11070|protein_coding|CODING|LOC_Os07g11070.1|2|1) FN1674-S.SNP.7:6120400 chr07:006120400 0 W/6120400-6120400 FN1674-S SNP A -> G AC=2;AN=188;BQB=0.0386277;DP=3268;DP4=1204,2026,16,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.3739e-10;MQSB=0.986843;RPB=0.385618;SGB=-41.4749;VDB=0.891329;EFF=INTRON(MODIFIER||||737|LOC_Os07g11070|protein_coding|CODING|LOC_Os07g11070.1|1|1) FN873-S.SNP.7:6121432 chr07:006121432 0 W/6121432-6121432 FN873-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g11070 DUF630/DUF632 domains containing protein, putative, expressed SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-151.SNP.7:6122227 chr07:006122227 0 W/6122227-6122227 FN-151 Single Base Substitution C-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2434.SNP.7:6125147 chr07:006125147 0 W/6125147-6125147 FN2434 SNP G -> A AC=1;AN=200;BQB=0.886281;DP=4646;DP4=2072,2348,2,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000215239;MQB=0.000656701;MQSB=0.0382647;RPB=0.480681;SGB=8.64371;VDB=0.0400055;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A118|630|LOC_Os07g11080|protein_coding|CODING|LOC_Os07g11080.1|1|1) FN550-S.SNP.7:6126914 chr07:006126914 0 W/6126914-6126914 FN550-S Single Base Substitution C-T INTRON HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN501-S.SNP.7:6129785 chr07:006129785 0 W/6129785-6129785 FN501-S Single Base Substitution G-T INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2608-S.SNP.7:6132430 chr07:006132430 0 W/6132430-6132430 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.561125;DP=4264;DP4=2074,1999,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234522;MQB=4.81648e-10;MQSB=0.379325;RPB=0.578106;SGB=77.1196;VDB=0.472891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:6136359 chr07:006136359 0 W/6136359-6136359 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.117384;DP=4224;DP4=2126,1823,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.42096e-08;MQSB=1;RPB=0.290172;SGB=26.7492;VDB=0.543287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P360S|392|LOC_Os07g11110|protein_coding|CODING|LOC_Os07g11110.1|6|1) FN2577-S.SNP.7:6136360 chr07:006136360 0 W/6136360-6136360 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.908574;DP=4250;DP4=2103,1860,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.86599e-09;MQSB=0.999931;RPB=0.314181;SGB=58.7391;VDB=0.605471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P360L|392|LOC_Os07g11110|protein_coding|CODING|LOC_Os07g11110.1|6|1) FN4052-S.SNP.7:6141103 chr07:006141103 0 W/6141103-6141103 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.473676;DP=2913;DP4=1284,1429,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.28006e-05;MQSB=0.00016427;RPB=0.994566;SGB=82.7794;VDB=0.650809;EFF=UTR_5_PRIME(MODIFIER||268||182|LOC_Os07g11120|protein_coding|CODING|LOC_Os07g11120.1|1|1) FN967-S.SNP.7:6143085 chr07:006143085 0 W/6143085-6143085 FN967-S Single Base Substitution A-G INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN3959-S.SNP.7:6144357 chr07:006144357 0 W/6144357-6144357 FN3959-S SNP C -> T AC=2;AN=168;BQB=0.903071;DP=2386;DP4=1092,1208,7,10;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=2.04758e-06;MQSB=0.00385976;RPB=0.829481;SGB=48.4712;VDB=0.822234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.7:6144705 chr07:006144705 0 W/6144705-6144705 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1535-S.SNP.7:6155330 chr07:006155330 0 W/6155330-6155330 FN1535-S Single Base Substitution G-T INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN775-S.SNP.7:6168171 chr07:006168171 0 W/6168171-6168171 FN775-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g11190 retrotransposon protein, putative, unclassified, expressed SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN_841-7-2.SNP.7:6173169 chr07:006173169 0 W/6173169-6173169 FN_841-7-2 Single Base Substitution G-C Homo SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN-388.SNP.7:6177767 chr07:006177767 0 W/6177767-6177767 FN-388 Single Base Substitution C-T INTRON HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN801-S.SNP.7:6178248 chr07:006178248 0 W/6178248-6178248 FN801-S Single Base Substitution C-G INTRON HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1471-S.SNP.7:6178664 chr07:006178664 0 W/6178664-6178664 FN1471-S SNP A -> G AC=1;AN=188;BQB=0.0202079;DP=3379;DP4=1749,1585,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.119036;MQSB=0.982538;RPB=0.812685;SGB=-37.8212;VDB=0.98566;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R337|710|LOC_Os07g11220|protein_coding|CODING|LOC_Os07g11220.1|3|1) FN477-S.SNP.7:6179473 chr07:006179473 0 W/6179473-6179473 FN477-S Single Base Substitution G-A STOP_GAINED HET LOC_Os07g11220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1725-S.SNP.7:6181206 chr07:006181206 0 W/6181206-6181206 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.339446;DP=3676;DP4=1646,1968,20,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.1061e-17;MQSB=0.931737;RPB=0.743325;SGB=-4.67716;VDB=0.755936;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D515|659|LOC_Os07g11230|protein_coding|CODING|LOC_Os07g11230.1|7|1) FN3795-S.SNP.7:6183238 chr07:006183238 0 W/6183238-6183238 FN3795-S SNP C -> G AC=1;AN=190;BQB=0.976942;DP=2926;DP4=1474,1327,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98147e-10;MQSB=0.992149;RPB=0.666753;SGB=85.5263;VDB=0.785766;EFF=INTRON(MODIFIER||||659|LOC_Os07g11230|protein_coding|CODING|LOC_Os07g11230.1|1|1) FN2657-S.SNP.7:6183888 chr07:006183888 0 W/6183888-6183888 FN2657-S SNP G -> T AC=1;AN=200;BQB=0.470282;DP=5063;DP4=2398,2244,10,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.75736e-11;MQSB=0.618187;RPB=0.319525;SGB=114.132;VDB=0.100853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.7:6185955 chr07:006185955 0 W/6185955-6185955 FN2285 SNP T -> C AC=2;AN=192;BQB=0.93225;DP=5344;DP4=2364,2556,16,31;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.20667e-19;MQSB=0.110381;RPB=0.780295;SGB=105.844;VDB=0.793788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.7:6188866 chr07:006188866 0 W/6188866-6188866 FN2283 SNP T -> C AC=1;AN=192;BQB=0.650852;DP=5060;DP4=2226,2313,18,20;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000197628;MQB=8.47042e-13;MQSB=0.0103188;RPB=0.850998;SGB=82.7652;VDB=0.353685;EFF=INTRON(MODIFIER||||1741|LOC_Os07g11240|protein_coding|CODING|LOC_Os07g11240.1|2|1) FN-164.SNP.7:6192930 chr07:006192930 0 W/6192930-6192930 FN-164 Single Base Substitution G-C INTRON HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2340.SNP.7:6195006 chr07:006195006 0 W/6195006-6195006 FN2340 SNP G -> C AC=2;AN=192;BQB=0.790621;DP=5169;DP4=2614,2290,17,17;HOB=0.0206163;ICB=0.494846;MQ=41;MQ0F=0.00270845;MQB=1.52564e-06;MQSB=0.215187;RPB=0.889523;SGB=72.5078;VDB=0.917947;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.7:6197881 chr07:006197881 0 W/6197881-6197881 FN1456-S Single Base Substitution G-C INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1401-S.SNP.7:6200765 chr07:006200765 0 W/6200765-6200765 FN1401-S Single Base Substitution A-G INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN521-S.SNP.7:6201360 chr07:006201360 0 W/6201360-6201360 FN521-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2596-S.SNP.7:6214344 chr07:006214344 0 W/6214344-6214344 FN2596-S SNP T -> A AC=1;AN=198;BQB=0.0597378;DP=4098;DP4=1776,1943,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00292826;MQB=1.14244e-09;MQSB=8.3398e-11;RPB=0.547051;SGB=-72.4696;VDB=0.7224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T141S|893|LOC_Os07g11270|protein_coding|CODING|LOC_Os07g11270.1|2|1) FN3285-S.SNP.7:6214434 chr07:006214434 0 W/6214434-6214434 FN3285-S SNP T -> C AC=1;AN=184;BQB=0.828098;DP=2825;DP4=1368,1278,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000353982;MQB=3.27977e-07;MQSB=0.223168;RPB=0.99809;SGB=3.75875;VDB=0.328431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N111D|893|LOC_Os07g11270|protein_coding|CODING|LOC_Os07g11270.1|2|1) FN820-S.SNP.7:6217774 chr07:006217774 0 W/6217774-6217774 FN820-S Single Base Substitution A-G INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN2378.SNP.7:6228215 chr07:006228215 0 W/6228215-6228215 FN2378 SNP A -> T AC=1;AN=192;BQB=0.961175;DP=5073;DP4=2442,2379,15,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.21783e-19;MQSB=0.840929;RPB=0.855159;SGB=72.5078;VDB=0.203166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y478N|677|LOC_Os07g11280|protein_coding|CODING|LOC_Os07g11280.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y478N|677|LOC_Os07g11280|protein_coding|CODING|LOC_Os07g11280.2|4|1) FN2621-S.SNP.7:6231732 chr07:006231732 0 W/6231732-6231732 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.911886;DP=4238;DP4=2265,1751,20,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.28239e-08;MQSB=0.081173;RPB=0.822619;SGB=94.3471;VDB=0.613185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.7:6246836 chr07:006246836 0 W/6246836-6246836 FN2377 SNP C -> T AC=1;AN=192;BQB=0.116559;DP=4198;DP4=2219,1750,26,4;HOB=5.42535e-05;ICB=0.000109072;MQ=25;MQ0F=0.0964745;MQB=0.83994;MQSB=0;RPB=0.974551;SGB=131.369;VDB=0.132352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V433I|606|LOC_Os07g11340|protein_coding|CODING|LOC_Os07g11340.1|2|1) FN880-S.SNP.7:6255951 chr07:006255951 0 W/6255951-6255951 FN880-S Single Base Substitution G-A INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN323-S.SNP.7:6340779 chr07:006340779 0 W/6340779-6340779 FN323-S Single Base Substitution T-A INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1651-S.SNP.7:6357021 chr07:006357021 0 W/6357021-6357021 FN1651-S Single Base Substitution C-T INTERGENIC Homo SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN-210.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN-210 Single Base Substitution C-G INTERGENIC HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN-335.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN-335 Single Base Substitution C-G INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1720-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN1720-S SNP C -> G AC=2;AN=188;BQB=0.234357;DP=3980;DP4=1700,2198,28,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.72651e-23;MQSB=0.999991;RPB=0.833508;SGB=-218.136;VDB=0.309764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN2081-S SNP C -> G AC=2;AN=168;BQB=0.281979;DP=4198;DP4=1927,2186,17,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.92686e-18;MQSB=0.999941;RPB=0.835069;SGB=-283.582;VDB=0.33657;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN2269-S SNP C -> G AC=1;AN=190;BQB=0.922406;DP=5172;DP4=2213,2604,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193349;MQB=4.60565e-18;MQSB=0.691732;RPB=0.515851;SGB=27.4193;VDB=0.47459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN2376 SNP C -> G AC=2;AN=192;BQB=0.876577;DP=5241;DP4=2269,2665,14,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.17003e-18;MQSB=0.837456;RPB=0.903514;SGB=-4.61041;VDB=0.603991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN3459-S SNP C -> G AC=1;AN=184;BQB=0.971654;DP=2504;DP4=1177,1256,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.85231e-07;MQSB=0.821867;RPB=0.519496;SGB=44.2207;VDB=0.976333;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN3637-S SNP C -> G AC=1;AN=190;BQB=0.993073;DP=3017;DP4=1396,1520,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15719e-09;MQSB=0.964593;RPB=0.670128;SGB=50.3161;VDB=0.569678;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN431-S Single Base Substitution C-G INTERGENIC HOMO SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN597-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN597-S Single Base Substitution C-G INTERGENIC HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN628-S.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 FN628-S Single Base Substitution C-G INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. W252-6-1.SNP.7:6368225 chr07:006368225 0 W/6368225-6368225 W252-6-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3710-S.SNP.7:6384986 chr07:006384986 0 W/6384986-6384986 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.918107;DP=1599;DP4=922,614,4,2;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00125078;MQB=0.172155;MQSB=8.67609e-18;RPB=0.922585;SGB=21.7749;VDB=0.749879;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.7:6400806 chr07:006400806 0 W/6400806-6400806 FN781-S Single Base Substitution T-A INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2218-S.SNP.7:6407089 chr07:006407089 0 W/6407089-6407089 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.509123;DP=4042;DP4=1691,2002,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.021524;MQB=0.00146566;MQSB=0.361666;RPB=0.554792;SGB=60.9777;VDB=0.421084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P1547Q|1978|LOC_Os07g11610|protein_coding|CODING|LOC_Os07g11610.1|2|1) FN-265.SNP.7:6407791 chr07:006407791 0 W/6407791-6407791 FN-265 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g11610 transposon protein, putative, unclassified, expressed SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2719-S.SNP.7:6408002 chr07:006408002 0 W/6408002-6408002 FN2719-S SNP G -> A AC=1;AN=200;BQB=0.999942;DP=5944;DP4=3725,1877,7,10;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0676312;MQB=0.512447;MQSB=6.34619e-09;RPB=0.992654;SGB=72.6852;VDB=0.7845;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1243S|1978|LOC_Os07g11610|protein_coding|CODING|LOC_Os07g11610.1|2|1) FN2689-S.SNP.7:6408202 chr07:006408202 0 W/6408202-6408202 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.124172;DP=7669;DP4=3972,3056,7,8;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0503325;MQB=0.0825876;MQSB=0;RPB=0.740078;SGB=63.4749;VDB=0.235359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1176Q|1978|LOC_Os07g11610|protein_coding|CODING|LOC_Os07g11610.1|2|1) FN-85.SNP.7:6419491 chr07:006419491 0 W/6419491-6419491 FN-85 Single Base Substitution G-A INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN574-S.SNP.7:6419495 chr07:006419495 0 W/6419495-6419495 FN574-S Single Base Substitution T-C INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN574-S.SNP.7:6419496 chr07:006419496 0 W/6419496-6419496 FN574-S Single Base Substitution A-T INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN3064-S.SNP.7:6421223 chr07:006421223 0 W/6421223-6421223 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.921946;DP=2899;DP4=1352,1414,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.0565e-06;MQSB=0.147711;RPB=0.978013;SGB=10.6662;VDB=0.994986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.7:6421809 chr07:006421809 0 W/6421809-6421809 FN2419 SNP C -> A AC=1;AN=200;BQB=0.282804;DP=4671;DP4=2129,2275,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000214087;MQB=5.23134e-12;MQSB=0.930108;RPB=0.906035;SGB=23.9365;VDB=0.521591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.7:6422041 chr07:006422041 0 W/6422041-6422041 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.0196492;DP=2892;DP4=1838,613,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29375e-06;MQSB=0.00170249;RPB=0.26431;SGB=-33.6477;VDB=0.726065;EFF=INTERGENIC(MODIFIER||||||||||1) FN-91.SNP.7:6422349 chr07:006422349 0 W/6422349-6422349 FN-91 Single Base Substitution G-A INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN754-S.SNP.7:6431853 chr07:006431853 0 W/6431853-6431853 FN754-S Single Base Substitution C-G INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3463-S.SNP.7:6440970 chr07:006440970 0 W/6440970-6440970 FN3463-S SNP C -> T AC=1;AN=184;BQB=0.697736;DP=2752;DP4=1661,966,18,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000726744;MQB=4.47324e-11;MQSB=0.0010923;RPB=0.943951;SGB=-9.49613;VDB=0.347917;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.7:6443277 chr07:006443277 0 W/6443277-6443277 FN431-S Single Base Substitution C-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN431-S.SNP.7:6443278 chr07:006443278 0 W/6443278-6443278 FN431-S Single Base Substitution C-T INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN431-S.SNP.7:6443279 chr07:006443279 0 W/6443279-6443279 FN431-S Single Base Substitution T-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN2213-S.SNP.7:6445582 chr07:006445582 0 W/6445582-6445582 FN2213-S SNP A -> T AC=2;AN=190;BQB=0.636375;DP=4955;DP4=2400,2279,19,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.06901e-19;MQSB=0.623006;RPB=0.979832;SGB=128.501;VDB=0.203026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.7:6446308 chr07:006446308 0 W/6446308-6446308 FN3945-S SNP A -> T AC=2;AN=168;BQB=0.270936;DP=2604;DP4=1259,1219,17,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.85032e-10;MQSB=0.889462;RPB=0.99302;SGB=69.0561;VDB=0.42426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.7:6449242 chr07:006449242 0 W/6449242-6449242 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.895823;DP=3114;DP4=1188,1804,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.97133e-08;MQSB=0.896501;RPB=0.80473;SGB=48.7425;VDB=0.343518;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.7:6449693 chr07:006449693 0 W/6449693-6449693 FN854-S Single Base Substitution G-T INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN1315-S.SNP.7:6454902 chr07:006454902 0 W/6454902-6454902 FN1315-S Single Base Substitution G-T INTRON HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN3550-S.SNP.7:6455556 chr07:006455556 0 W/6455556-6455556 FN3550-S SNP G -> T AC=1;AN=188;BQB=0.799202;DP=2686;DP4=1365,1240,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.19457e-08;MQSB=0.413567;RPB=0.857486;SGB=62.6088;VDB=0.963951;EFF=INTRON(MODIFIER||||953|LOC_Os07g11670|protein_coding|CODING|LOC_Os07g11670.1|4|1) FN624-S.SNP.7:6457203 chr07:006457203 0 W/6457203-6457203 FN624-S Single Base Substitution A-G INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN624-S.SNP.7:6457208 chr07:006457208 0 W/6457208-6457208 FN624-S Single Base Substitution A-C INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN1494-S.SNP.7:6460236 chr07:006460236 0 W/6460236-6460236 FN1494-S Single Base Substitution T-C INTRON HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN948-S.SNP.7:6460535 chr07:006460535 0 W/6460535-6460535 FN948-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g11680 retrotransposon protein, putative, unclassified, expressed SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN-387.SNP.7:6461197 chr07:006461197 0 W/6461197-6461197 FN-387 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g11680 retrotransposon protein, putative, unclassified, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN_770-6-1.SNP.7:6462536 chr07:006462536 0 W/6462536-6462536 FN_770-6-1 Single Base Substitution C-T HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN3914-S.SNP.7:6464176 chr07:006464176 0 W/6464176-6464176 FN3914-S SNP C -> T AC=2;AN=158;BQB=0.999755;DP=2233;DP4=1285,840,14,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.96286e-16;MQSB=0.60497;RPB=0.644559;SGB=81.2457;VDB=0.199214;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G653E|1991|LOC_Os07g11680|protein_coding|CODING|LOC_Os07g11680.1|3|1) FN3564-S.SNP.7:6469438 chr07:006469438 0 W/6469438-6469438 FN3564-S SNP C -> A AC=1;AN=188;BQB=0.527035;DP=2853;DP4=1341,1433,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4932e-07;MQSB=0.966089;RPB=0.377437;SGB=71.6954;VDB=0.756532;EFF=INTERGENIC(MODIFIER||||||||||1) FN-98.SNP.7:6471877 chr07:006471877 0 W/6471877-6471877 FN-98 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g11700 retrotransposon protein, putative, unclassified, expressed SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2464.SNP.7:6476154 chr07:006476154 0 W/6476154-6476154 FN2464 SNP C -> T AC=1;AN=200;BQB=0.96024;DP=4295;DP4=1940,1964,6,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00908033;MQB=0.0169844;MQSB=0.86594;RPB=0.399726;SGB=21.6694;VDB=0.359018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.7:6476918 chr07:006476918 0 W/6476918-6476918 FN2575-S SNP G -> A AC=2;AN=198;BQB=0.0473626;DP=3892;DP4=1943,1605,37,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.34108e-37;MQSB=0.999529;RPB=0.999381;SGB=262.704;VDB=0.139596;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.7:6476919 chr07:006476919 0 W/6476919-6476919 FN2575-S SNP G -> A AC=2;AN=198;BQB=0.0270339;DP=3878;DP4=1932,1616,38,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.2395e-34;MQSB=0.998902;RPB=0.761756;SGB=160.787;VDB=0.0525655;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.7:6478467 chr07:006478467 0 W/6478467-6478467 FN854-S Single Base Substitution C-A INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3909-S.SNP.7:6479877 chr07:006479877 0 W/6479877-6479877 FN3909-S SNP T -> G AC=1;AN=158;BQB=0.993158;DP=2484;DP4=1143,1240,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.35664e-07;MQSB=0.999628;RPB=0.933061;SGB=51.4366;VDB=0.436745;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.7:6481069 chr07:006481069 0 W/6481069-6481069 FN428-S Single Base Substitution A-T INTERGENIC HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2324.SNP.7:6485930 chr07:006485930 0 W/6485930-6485930 FN2324 SNP C -> T AC=1;AN=192;BQB=0.786936;DP=4412;DP4=2175,1917,13,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.36984e-08;MQSB=0.67086;RPB=0.246574;SGB=50.4731;VDB=0.596295;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.7:6486497 chr07:006486497 0 W/6486497-6486497 FN-114 Single Base Substitution G-C INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN670-S.SNP.7:6499378 chr07:006499378 0 W/6499378-6499378 FN670-S Single Base Substitution C-T INTRON HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2305.SNP.7:6504253 chr07:006504253 0 W/6504253-6504253 FN2305 SNP T -> C AC=1;AN=192;BQB=0.939712;DP=5199;DP4=2450,2466,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61327e-17;MQSB=0.592887;RPB=0.492506;SGB=100.374;VDB=0.635872;EFF=INTRON(MODIFIER||||306|LOC_Os07g11770|protein_coding|CODING|LOC_Os07g11770.1|2|1) FN548-S.SNP.7:6509764 chr07:006509764 0 W/6509764-6509764 FN548-S Single Base Substitution C-A INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN2496.SNP.7:6510029 chr07:006510029 0 W/6510029-6510029 FN2496 SNP A -> G AC=1;AN=200;BQB=0.7868;DP=4367;DP4=1937,1985,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74255e-12;MQSB=0.982761;RPB=0.971439;SGB=39.9056;VDB=0.346401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1644-S.SNP.7:6512815 chr07:006512815 0 W/6512815-6512815 FN1644-S Single Base Substitution C-T INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN502-S.SNP.7:6514062 chr07:006514062 0 W/6514062-6514062 FN502-S Single Base Substitution G-A INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. W470-2-1.SNP.7:6514997 chr07:006514997 0 W/6514997-6514997 W470-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2290.SNP.7:6515462 chr07:006515462 0 W/6515462-6515462 FN2290 SNP C -> T AC=1;AN=192;BQB=0.813478;DP=5008;DP4=2311,2448,20,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.24795e-19;MQSB=0.546673;RPB=0.709753;SGB=158.755;VDB=0.124274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:6516504 chr07:006516504 0 W/6516504-6516504 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.61987;DP=4732;DP4=2074,2113,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26853e-15;MQSB=0.819301;RPB=0.0786312;SGB=-42.0277;VDB=0.348149;EFF=INTRON(MODIFIER||||540|LOC_Os07g11790|protein_coding|CODING|LOC_Os07g11790.1|6|1) FN488-S.SNP.7:6521274 chr07:006521274 0 W/6521274-6521274 FN488-S Single Base Substitution T-A INTRON HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2365.SNP.7:6526218 chr07:006526218 0 W/6526218-6526218 FN2365 SNP T -> A AC=1;AN=192;BQB=0.571051;DP=4675;DP4=2280,2052,15,21;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00470588;MQB=3.38636e-07;MQSB=0.574491;RPB=0.997788;SGB=77.6365;VDB=0.805678;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.7:6530822 chr07:006530822 0 W/6530822-6530822 FN-83 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g11800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN-83.SNP.7:6530824 chr07:006530824 0 W/6530824-6530824 FN-83 Single Base Substitution G-T STOP_GAINED HOMO LOC_Os07g11800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN938-S.SNP.7:6532588 chr07:006532588 0 W/6532588-6532588 FN938-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g11800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2562-S.SNP.7:6535035 chr07:006535035 0 W/6535035-6535035 FN2562-S SNP A -> G AC=1;AN=198;BQB=0.869545;DP=5108;DP4=1881,2938,11,23;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.170908;MQB=0.999658;MQSB=0;RPB=0.610106;SGB=-119.489;VDB=0.303111;EFF=INTRON(MODIFIER||||272|LOC_Os07g11810|protein_coding|CODING|LOC_Os07g11810.1|1|1) FN4074-S.SNP.7:6538732 chr07:006538732 0 W/6538732-6538732 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.960776;DP=2529;DP4=1366,1096,11,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.32047e-09;MQSB=0.999916;RPB=0.114836;SGB=46.1603;VDB=0.0120387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.7:6540267 chr07:006540267 0 W/6540267-6540267 FN1529-S Single Base Substitution A-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. 705-3.SNP.7:6542279 chr07:006542279 0 W/6542279-6542279 705-3 Single Base Substitution C-G INTERGENIC Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. FN355-S.SNP.7:6543280 chr07:006543280 0 W/6543280-6543280 FN355-S Single Base Substitution T-C INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3363-S.SNP.7:6543338 chr07:006543338 0 W/6543338-6543338 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.831971;DP=3508;DP4=1860,1561,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000285063;MQB=1.93672e-07;MQSB=0.969973;RPB=0.901231;SGB=66.8296;VDB=0.861521;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.7:6543619 chr07:006543619 0 W/6543619-6543619 FN1217-S Single Base Substitution C-G INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN-217.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN-217 Single Base Substitution A-G INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-394.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN-394 Single Base Substitution A-G INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-87.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN-87 Single Base Substitution A-G INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1116-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN1116-S Single Base Substitution A-G INTERGENIC HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1483-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN1483-S Single Base Substitution A-G INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2119-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN2119-S SNP A -> G AC=2;AN=168;BQB=0.676752;DP=3588;DP4=2104,1435,18,18;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=2.21521e-15;MQSB=0.409927;RPB=0.053049;SGB=73.2319;VDB=0.459939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN2321 SNP A -> G AC=2;AN=192;BQB=0.840534;DP=4919;DP4=2328,2293,22,28;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=1.1604e-11;MQSB=0.0751223;RPB=0.842827;SGB=168.097;VDB=0.517766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN2464 SNP A -> G AC=2;AN=200;BQB=0.733932;DP=4676;DP4=2246,2152,24,11;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.43069e-07;MQSB=0.0923996;RPB=0.996389;SGB=115.978;VDB=0.0147516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN3521-S SNP A -> G AC=2;AN=188;BQB=0.930191;DP=3201;DP4=1336,1750,13,14;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.13098e-07;MQSB=0.0260311;RPB=0.801308;SGB=22.5144;VDB=0.251332;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN666-S Single Base Substitution A-G INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN976-S.SNP.7:6543809 chr07:006543809 0 W/6543809-6543809 FN976-S Single Base Substitution A-G INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN-403.SNP.7:6547030 chr07:006547030 0 W/6547030-6547030 FN-403 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g11830 transposon protein, putative, CACTA, En/Spm sub-class SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN1723-S.SNP.7:6547104 chr07:006547104 0 W/6547104-6547104 FN1723-S SNP T -> C AC=1;AN=188;BQB=0.496174;DP=2451;DP4=1133,1286,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8754e-05;MQSB=0.542825;RPB=0.760475;SGB=3.99491;VDB=0.940862;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H336|558|LOC_Os07g11830|protein_coding|CODING|LOC_Os07g11830.1|3|1) FN3950-S.SNP.7:6548807 chr07:006548807 0 W/6548807-6548807 FN3950-S SNP G -> A AC=1;AN=168;BQB=0.508473;DP=1515;DP4=583,870,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000181402;MQSB=0.680128;RPB=0.6197;SGB=24.4556;VDB=0.227032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.7:6549515 chr07:006549515 0 W/6549515-6549515 FN3455-S SNP C -> T AC=2;AN=184;BQB=0.887433;DP=3245;DP4=1302,1813,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.86095e-19;MQSB=0.982704;RPB=0.944961;SGB=95.6183;VDB=0.774385;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.7:6557258 chr07:006557258 0 W/6557258-6557258 FN_772-3-1 Single Base Substitution C-T HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1073-S.SNP.7:6560653 chr07:006560653 0 W/6560653-6560653 FN1073-S Single Base Substitution G-A INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2609-S.SNP.7:6560748 chr07:006560748 0 W/6560748-6560748 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.945113;DP=2776;DP4=1362,913,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000507371;MQSB=6.093e-06;RPB=0.72864;SGB=40.3588;VDB=0.342083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.7:6561696 chr07:006561696 0 W/6561696-6561696 FN2484 SNP C -> T AC=1;AN=200;BQB=0.541419;DP=4795;DP4=2164,2402,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.26438e-16;MQSB=0.725492;RPB=0.353989;SGB=68.5625;VDB=0.0565055;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1392|1416|LOC_Os07g11860|protein_coding|CODING|LOC_Os07g11860.1|7|1) FN-201.SNP.7:6562430 chr07:006562430 0 W/6562430-6562430 FN-201 Single Base Substitution A-G INTRON HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2218-S.SNP.7:6564155 chr07:006564155 0 W/6564155-6564155 FN2218-S SNP T -> A AC=1;AN=190;BQB=0.984579;DP=5244;DP4=2235,2683,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00724638;MQB=1.50965e-08;MQSB=6.73368e-05;RPB=0.923715;SGB=59.414;VDB=0.984561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K765M|1416|LOC_Os07g11860|protein_coding|CODING|LOC_Os07g11860.1|5|1) FN2305.SNP.7:6565499 chr07:006565499 0 W/6565499-6565499 FN2305 SNP C -> T AC=1;AN=192;BQB=0.986985;DP=4860;DP4=2536,2081,15,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00617284;MQB=1.2878e-08;MQSB=5.38685e-14;RPB=0.715238;SGB=12.0478;VDB=0.443098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R345Q|1416|LOC_Os07g11860|protein_coding|CODING|LOC_Os07g11860.1|4|1) FN810-S.SNP.7:6566411 chr07:006566411 0 W/6566411-6566411 FN810-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g11860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-157.SNP.7:6568296 chr07:006568296 0 W/6568296-6568296 FN-157 Single Base Substitution A-T INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN1707-S.SNP.7:6568810 chr07:006568810 0 W/6568810-6568810 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.86625;DP=2115;DP4=1185,881,14,19;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0652482;MQB=0.963989;MQSB=2.50483e-27;RPB=0.97624;SGB=56.5267;VDB=0.656328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:6579764 chr07:006579764 0 W/6579764-6579764 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.980509;DP=4689;DP4=2324,2174,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10707e-12;MQSB=0.963977;RPB=0.814766;SGB=91.1059;VDB=0.0876187;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.7:6591014 chr07:006591014 0 W/6591014-6591014 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.313745;DP=2388;DP4=1096,1089,3,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.00068e-05;MQSB=0.985255;RPB=0.972739;SGB=3.4556;VDB=0.456713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.7:6605344 chr07:006605344 0 W/6605344-6605344 FN1325-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3932-S.SNP.7:6606518 chr07:006606518 0 W/6606518-6606518 FN3932-S SNP T -> A AC=1;AN=158;BQB=0.628043;DP=2325;DP4=1235,1019,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.86145e-06;MQSB=0.951445;RPB=0.809196;SGB=11.9715;VDB=0.289677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.7:6606875 chr07:006606875 0 W/6606875-6606875 FN3809-S SNP T -> C AC=1;AN=190;BQB=0.947496;DP=2575;DP4=1356,1137,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.66363e-06;MQSB=0.857774;RPB=0.775664;SGB=35.4339;VDB=0.799646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.7:6610188 chr07:006610188 0 W/6610188-6610188 FN-350 Single Base Substitution G-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN3957-S.SNP.7:6621453 chr07:006621453 0 W/6621453-6621453 FN3957-S SNP G -> A AC=2;AN=168;BQB=0.999565;DP=2424;DP4=1238,1087,19,7;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.00495049;MQB=4.815e-07;MQSB=0.463974;RPB=0.323759;SGB=109.773;VDB=0.558122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.7:6631643 chr07:006631643 0 W/6631643-6631643 FN3386-S SNP G -> A AC=1;AN=184;BQB=0.884614;DP=2735;DP4=1271,1310,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5902e-07;MQSB=0.843992;RPB=0.14266;SGB=44.2207;VDB=0.225193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.7:6631652 chr07:006631652 0 W/6631652-6631652 FN3386-S SNP G -> A AC=1;AN=184;BQB=0.995605;DP=2732;DP4=1252,1341,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03207e-08;MQSB=0.951357;RPB=0.118832;SGB=53.2642;VDB=0.285423;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.7:6632485 chr07:006632485 0 W/6632485-6632485 FN4142-S SNP T -> A AC=1;AN=170;BQB=0.976519;DP=2471;DP4=1085,1287,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31231e-06;MQSB=0.505536;RPB=0.579261;SGB=31.4354;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.7:6633630 chr07:006633630 0 W/6633630-6633630 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.333196;DP=2880;DP4=1431,1225,6,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.0829e-08;MQSB=0.454726;RPB=0.592271;SGB=-84.3392;VDB=0.925057;EFF=INTRON(MODIFIER||||515|LOC_Os07g11970|protein_coding|CODING|LOC_Os07g11970.1|1|1) FN1304-S.SNP.7:6647608 chr07:006647608 0 W/6647608-6647608 FN1304-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g11990 conserved hypothetical protein SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1241-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN1241-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1384-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN1384-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN4088-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN4088-S SNP T -> G AC=2;AN=182;BQB=0.931755;DP=1263;DP4=235,989,2,8;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=0.00180459;MQSB=0.104088;RPB=0.859338;SGB=39.6007;VDB=0.117011;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN449-S Single Base Substitution T-G INTERGENIC HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN521-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN521-S Single Base Substitution T-G INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN588-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN588-S Single Base Substitution T-G INTERGENIC HOMO SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN773-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN773-S Single Base Substitution T-G INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN860-S.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 FN860-S Single Base Substitution T-G INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. W481-5-1.SNP.7:6656326 chr07:006656326 0 W/6656326-6656326 W481-5-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-73.SNP.7:6657275 chr07:006657275 0 W/6657275-6657275 FN-73 Single Base Substitution A-C INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN-65.SNP.7:6660670 chr07:006660670 0 W/6660670-6660670 FN-65 Single Base Substitution T-A INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN2152-S.SNP.7:6663831 chr07:006663831 0 W/6663831-6663831 FN2152-S SNP C -> T AC=1;AN=168;BQB=0.466503;DP=4132;DP4=2148,1954,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00896619;MQSB=0.136771;RPB=0.747157;SGB=27.8864;VDB=0.640463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.7:6676403 chr07:006676403 0 W/6676403-6676403 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.987492;DP=5109;DP4=2388,2484,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.12129e-14;MQSB=0.9833;RPB=0.382286;SGB=104.921;VDB=0.524245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.7:6680282 chr07:006680282 0 W/6680282-6680282 FN3881-S SNP T -> A AC=2;AN=158;BQB=0.985464;DP=2518;DP4=1240,1174,9,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.68439e-14;MQSB=0.932634;RPB=0.789492;SGB=38.0354;VDB=0.643049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.7:6680283 chr07:006680283 0 W/6680283-6680283 FN3881-S SNP G -> A AC=2;AN=158;BQB=0.789329;DP=2493;DP4=1234,1158,8,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.56607e-14;MQSB=0.96914;RPB=0.836284;SGB=64.3985;VDB=0.548781;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.7:6686748 chr07:006686748 0 W/6686748-6686748 FN3886-S SNP G -> T AC=2;AN=158;BQB=0.765642;DP=1824;DP4=1000,696,13,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.36906e-12;MQSB=0.994635;RPB=0.553675;SGB=57.6596;VDB=0.119785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:6690897 chr07:006690897 0 W/6690897-6690897 FN2554-S SNP T -> C AC=1;AN=198;BQB=0.662155;DP=4254;DP4=2285,1798,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10925e-06;MQSB=0.841402;RPB=0.966454;SGB=25.7687;VDB=0.961991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.7:6694687 chr07:006694687 0 W/6694687-6694687 FN2240-S SNP A -> G AC=1;AN=190;BQB=0.396014;DP=5123;DP4=2279,2502,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.19261e-09;MQSB=0.978022;RPB=0.3767;SGB=46.7622;VDB=0.126824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.7:6696147 chr07:006696147 0 W/6696147-6696147 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.951208;DP=5227;DP4=2584,2371,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.10079e-14;MQSB=0.747008;RPB=0.779255;SGB=95.7111;VDB=0.0168827;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.7:6698480 chr07:006698480 0 W/6698480-6698480 FN-216 Single Base Substitution C-T INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2790-S.SNP.7:6709455 chr07:006709455 0 W/6709455-6709455 FN2790-S SNP A -> G AC=1;AN=198;BQB=0.936808;DP=4499;DP4=2218,2051,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.51045e-08;MQSB=0.89455;RPB=0.855571;SGB=40.149;VDB=0.557167;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R151|988|LOC_Os07g12020|protein_coding|CODING|LOC_Os07g12020.1|1|1) FN2703-S.SNP.7:6709834 chr07:006709834 0 W/6709834-6709834 FN2703-S SNP C -> T AC=1;AN=200;BQB=0.84618;DP=5064;DP4=2617,2219,18,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.36319e-12;MQSB=0.326399;RPB=0.988494;SGB=28.752;VDB=0.981953;EFF=INTRON(MODIFIER||||988|LOC_Os07g12020|protein_coding|CODING|LOC_Os07g12020.1|1|1) FN3552-S.SNP.7:6711645 chr07:006711645 0 W/6711645-6711645 FN3552-S SNP G -> C AC=1;AN=188;BQB=0.953779;DP=2657;DP4=1202,1352,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.44447e-09;MQSB=0.938946;RPB=0.232796;SGB=71.6954;VDB=0.156684;EFF=INTRON(MODIFIER||||988|LOC_Os07g12020|protein_coding|CODING|LOC_Os07g12020.1|4|1) FN2491.SNP.7:6712081 chr07:006712081 0 W/6712081-6712081 FN2491 SNP G -> A AC=1;AN=200;BQB=0.296594;DP=4163;DP4=1692,2257,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.89851e-06;MQSB=0.999106;RPB=0.898979;SGB=33.0593;VDB=0.728304;EFF=INTRON(MODIFIER||||988|LOC_Os07g12020|protein_coding|CODING|LOC_Os07g12020.1|4|1) FN2281.SNP.7:6715468 chr07:006715468 0 W/6715468-6715468 FN2281 SNP G -> A AC=1;AN=192;BQB=0.834494;DP=4485;DP4=2022,2094,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.90911e-16;MQSB=0.382243;RPB=0.882371;SGB=135.933;VDB=0.197541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.7:6716356 chr07:006716356 0 W/6716356-6716356 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.842653;DP=3879;DP4=1650,2040,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.83715e-07;MQSB=0.574364;RPB=0.786269;SGB=50.1053;VDB=0.395814;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.7:6716371 chr07:006716371 0 W/6716371-6716371 FN722-S Single Base Substitution C-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN3711-S.SNP.7:6719239 chr07:006719239 0 W/6719239-6719239 FN3711-S SNP T -> G AC=1;AN=190;BQB=0.908123;DP=3065;DP4=1540,1311,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0223e-07;MQSB=0.981506;RPB=0.993967;SGB=28.7675;VDB=0.839432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.7:6727098 chr07:006727098 0 W/6727098-6727098 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.597449;DP=2591;DP4=1163,1366,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63021e-09;MQSB=0.999957;RPB=0.954246;SGB=103.498;VDB=0.359455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.7:6727658 chr07:006727658 0 W/6727658-6727658 FN1436-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1436-S.SNP.7:6727660 chr07:006727660 0 W/6727660-6727660 FN1436-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1436-S.SNP.7:6727664 chr07:006727664 0 W/6727664-6727664 FN1436-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1606-S.SNP.7:6730941 chr07:006730941 0 W/6730941-6730941 FN1606-S Single Base Substitution A-G INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN894-S.SNP.7:6731379 chr07:006731379 0 W/6731379-6731379 FN894-S Single Base Substitution G-T INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN894-S.SNP.7:6731380 chr07:006731380 0 W/6731380-6731380 FN894-S Single Base Substitution G-T INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2138-S.SNP.7:6732298 chr07:006732298 0 W/6732298-6732298 FN2138-S SNP A -> C AC=1;AN=168;BQB=0.593421;DP=3714;DP4=1653,2007,18,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.43261e-15;MQSB=0.918442;RPB=0.495948;SGB=-169.317;VDB=0.761965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.7:6733541 chr07:006733541 0 W/6733541-6733541 FN1368-S Single Base Substitution C-T INTRON HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3526-S.SNP.7:6741513 chr07:006741513 0 W/6741513-6741513 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.520147;DP=2920;DP4=1243,1586,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.12025e-09;MQSB=0.998207;RPB=0.888889;SGB=58.0655;VDB=0.351645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R390H|742|LOC_Os07g12070|protein_coding|CODING|LOC_Os07g12070.1|3|1) FN-250.SNP.7:6765155 chr07:006765155 0 W/6765155-6765155 FN-250 Single Base Substitution A-T INTRON HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN3380-S.SNP.7:6765957 chr07:006765957 0 W/6765957-6765957 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.966531;DP=2845;DP4=1577,1177,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.42499e-06;MQSB=0.987034;RPB=0.862017;SGB=44.2207;VDB=0.0856353;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G229|439|LOC_Os07g12110|protein_coding|CODING|LOC_Os07g12110.1|3|1) FN3987-S.SNP.7:6766159 chr07:006766159 0 W/6766159-6766159 FN3987-S SNP A -> T AC=1;AN=168;BQB=0.806666;DP=2365;DP4=1416,839,10,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.85132e-07;MQSB=0.983147;RPB=0.993822;SGB=12.4615;VDB=0.0551731;EFF=SPLICE_SITE_DONOR(HIGH||||439|LOC_Os07g12110|protein_coding|CODING|LOC_Os07g12110.1|2|1),INTRON(MODIFIER||||439|LOC_Os07g12110|protein_coding|CODING|LOC_Os07g12110.1|2|1);LOF=(LOC_Os07g12110|LOC_Os07g12110|1|1.00) FN2329.SNP.7:6769230 chr07:006769230 0 W/6769230-6769230 FN2329 SNP G -> A AC=1;AN=192;BQB=0.422632;DP=4622;DP4=2081,2291,6,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.80741e-10;MQSB=0.67195;RPB=0.971481;SGB=12.0478;VDB=0.382591;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.7:6771097 chr07:006771097 0 W/6771097-6771097 FN427-S Single Base Substitution T-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN_786-4-1.SNP.7:6773490 chr07:006773490 0 W/6773490-6773490 FN_786-4-1 Single Base Substitution G-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3764-S.SNP.7:6773884 chr07:006773884 0 W/6773884-6773884 FN3764-S SNP G -> C AC=1;AN=190;BQB=0.987655;DP=2556;DP4=1399,1080,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06614e-07;MQSB=0.984335;RPB=0.92622;SGB=44.5415;VDB=0.816179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.7:6773885 chr07:006773885 0 W/6773885-6773885 FN3764-S SNP A -> G AC=1;AN=190;BQB=0.898315;DP=2564;DP4=1420,1074,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68033e-08;MQSB=0.98063;RPB=0.999831;SGB=32.5467;VDB=0.877688;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.7:6783730 chr07:006783730 0 W/6783730-6783730 FN409-S Single Base Substitution T-C INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1466-S.SNP.7:6785412 chr07:006785412 0 W/6785412-6785412 FN1466-S Single Base Substitution A-T INTERGENIC Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2297.SNP.7:6789229 chr07:006789229 0 W/6789229-6789229 FN2297 SNP A -> G AC=1;AN=192;BQB=0.999934;DP=4831;DP4=2173,2409,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.51462e-09;MQSB=0.867023;RPB=0.64118;SGB=26.3496;VDB=0.442372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.7:6795312 chr07:006795312 0 W/6795312-6795312 FN1617-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g12140 PPR repeat domain containing protein, putative, expressed SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN810-S.SNP.7:6796747 chr07:006796747 0 W/6796747-6796747 FN810-S Single Base Substitution T-C INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1497-S.SNP.7:6799760 chr07:006799760 0 W/6799760-6799760 FN1497-S Single Base Substitution T-C UTR_3_PRIME Homo SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1121-S.SNP.7:6804648 chr07:006804648 0 W/6804648-6804648 FN1121-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g12160 KHG/KDPG aldolase, putative, expressed SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1256-S.SNP.7:6807739 chr07:006807739 0 W/6807739-6807739 FN1256-S Single Base Substitution T-C INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2561-S.SNP.7:6814919 chr07:006814919 0 W/6814919-6814919 FN2561-S SNP A -> G AC=1;AN=198;BQB=0.291091;DP=4396;DP4=2091,2092,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00022748;MQB=1.65106e-06;MQSB=0.000188119;RPB=0.963775;SGB=-1.81641;VDB=0.50116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.7:6818872 chr07:006818872 0 W/6818872-6818872 FN1647-S Single Base Substitution G-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1509-S.SNP.7:6820605 chr07:006820605 0 W/6820605-6820605 FN1509-S Single Base Substitution T-A INTERGENIC Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3415-S.SNP.7:6828173 chr07:006828173 0 W/6828173-6828173 FN3415-S SNP T -> C AC=1;AN=184;BQB=0.989012;DP=3005;DP4=1568,1363,9,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.27921e-07;MQSB=0.69588;RPB=0.209267;SGB=13.188;VDB=0.265497;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.7:6831651 chr07:006831651 0 W/6831651-6831651 FN2545-S SNP C -> T AC=2;AN=198;BQB=0.368549;DP=4174;DP4=1908,2003,19,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.49789e-16;MQSB=0.036775;RPB=0.997999;SGB=136.856;VDB=0.0381029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.7:6834248 chr07:006834248 0 W/6834248-6834248 FN1269-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g12210 expressed protein SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1269-S.SNP.7:6834249 chr07:006834249 0 W/6834249-6834249 FN1269-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1451-S.SNP.7:6837125 chr07:006837125 0 W/6837125-6837125 FN1451-S Single Base Substitution G-C INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-206.SNP.7:6838000 chr07:006838000 0 W/6838000-6838000 FN-206 Single Base Substitution G-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2173-S.SNP.7:6838516 chr07:006838516 0 W/6838516-6838516 FN2173-S SNP G -> A AC=2;AN=168;BQB=9.29178e-06;DP=3945;DP4=2124,1732,36,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.81471e-17;MQSB=0.57071;RPB=0.072632;SGB=-805.084;VDB=0.682999;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.7:6851593 chr07:006851593 0 W/6851593-6851593 FN_949-1 Single Base Substitution A-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN709-S.SNP.7:6855077 chr07:006855077 0 W/6855077-6855077 FN709-S Single Base Substitution A-T INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN2785-S.SNP.7:6865699 chr07:006865699 0 W/6865699-6865699 FN2785-S SNP G -> C AC=1;AN=198;BQB=0.53811;DP=4515;DP4=2240,2037,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.2388e-07;MQSB=0.966199;RPB=0.906241;SGB=40.149;VDB=0.633742;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M56I|161|LOC_Os07g12250|protein_coding|CODING|LOC_Os07g12250.1|4|1) FN1550-S.SNP.7:6866923 chr07:006866923 0 W/6866923-6866923 FN1550-S Single Base Substitution C-A INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN3477-S.SNP.7:6868785 chr07:006868785 0 W/6868785-6868785 FN3477-S SNP G -> A AC=1;AN=184;BQB=0.7225;DP=2507;DP4=1336,1123,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.32117e-08;MQSB=0.970096;RPB=0.132136;SGB=57.786;VDB=0.639315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.7:6875113 chr07:006875113 0 W/6875113-6875113 FN3429-S SNP A -> G AC=1;AN=184;BQB=0.98795;DP=2696;DP4=1205,1315,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0586e-05;MQSB=0.000846606;RPB=0.953272;SGB=21.6609;VDB=0.488105;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.7:6876335 chr07:006876335 0 W/6876335-6876335 FN-366 Single Base Substitution T-C INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-13.SNP.7:6889642 chr07:006889642 0 W/6889642-6889642 FN-13 Single Base Substitution G-A INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1026-S.SNP.7:6890374 chr07:006890374 0 W/6890374-6890374 FN1026-S Single Base Substitution A-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1657-S.SNP.7:6890549 chr07:006890549 0 W/6890549-6890549 FN1657-S Single Base Substitution T-A INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2689-S.SNP.7:6893162 chr07:006893162 0 W/6893162-6893162 FN2689-S SNP G -> C AC=1;AN=200;BQB=0.0976291;DP=4767;DP4=2023,2450,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.99197e-07;MQSB=0.911834;RPB=0.814355;SGB=-36.8949;VDB=0.106614;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN-277 Single Base Substitution C-T INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-303.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN-303 Single Base Substitution C-T INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-344.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN-344 Single Base Substitution C-T INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-53.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN-53 Single Base Substitution C-T INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1067-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN1067-S Single Base Substitution C-T INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1399-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN1399-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1652-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN1652-S Single Base Substitution C-T INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2473.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN2473 SNP C -> T AC=2;AN=200;BQB=0.30677;DP=3527;DP4=1384,1916,8,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000283527;MQB=1.16109e-09;MQSB=0.341086;RPB=0.67698;SGB=68.0801;VDB=0.167305;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.803584;DP=2387;DP4=1100,1192,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.86221e-05;MQSB=0.921428;RPB=0.65668;SGB=39.699;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.909062;DP=2370;DP4=1073,1227,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6876e-07;MQSB=0.638618;RPB=0.0937054;SGB=67.1521;VDB=0.293362;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN3627-S SNP C -> T AC=2;AN=190;BQB=0.0609717;DP=1845;DP4=672,1088,7,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.85681e-06;MQSB=0.619063;RPB=0.960552;SGB=99.1879;VDB=0.255238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN3923-S SNP C -> T AC=2;AN=158;BQB=0.919863;DP=1721;DP4=738,904,8,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.92869e-07;MQSB=0.948137;RPB=0.999901;SGB=60.1755;VDB=0.540901;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN721-S Single Base Substitution C-T INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN796-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN796-S Single Base Substitution C-T INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN943-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN943-S Single Base Substitution C-T INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN960-S.SNP.7:6894587 chr07:006894587 0 W/6894587-6894587 FN960-S Single Base Substitution C-T INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN2281.SNP.7:6895448 chr07:006895448 0 W/6895448-6895448 FN2281 SNP C -> A AC=1;AN=192;BQB=0.878118;DP=4000;DP4=2182,1530,17,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.18452e-13;MQSB=0.928281;RPB=0.959662;SGB=46.8644;VDB=0.732958;EFF=INTRON(MODIFIER||||220|LOC_Os07g12270|protein_coding|CODING|LOC_Os07g12270.1|1|1) FN3909-S.SNP.7:6896816 chr07:006896816 0 W/6896816-6896816 FN3909-S SNP T -> A AC=1;AN=158;BQB=0.965763;DP=1795;DP4=950,753,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.000557103;MQB=0.00826927;MQSB=0.795321;RPB=0.0797352;SGB=17.2267;VDB=0.0262495;EFF=INTRON(MODIFIER||||220|LOC_Os07g12270|protein_coding|CODING|LOC_Os07g12270.1|3|1) FN3976-S.SNP.7:6898338 chr07:006898338 0 W/6898338-6898338 FN3976-S SNP T -> C AC=2;AN=168;BQB=0.94008;DP=2549;DP4=1353,998,15,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.93753e-13;MQSB=0.986784;RPB=0.976814;SGB=100.912;VDB=0.99688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.7:6903550 chr07:006903550 0 W/6903550-6903550 FN3309-S SNP C -> T AC=1;AN=184;BQB=0.991923;DP=3259;DP4=1516,1658,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=2.17025e-05;MQSB=0.0475278;RPB=0.38044;SGB=66.8296;VDB=0.147164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.7:6903870 chr07:006903870 0 W/6903870-6903870 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.999844;DP=2838;DP4=1547,1146,20,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.60893e-14;MQSB=0.757655;RPB=0.754955;SGB=108.296;VDB=0.361948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.7:6904992 chr07:006904992 0 W/6904992-6904992 FN2407 SNP A -> C AC=2;AN=200;BQB=0.757786;DP=4845;DP4=2005,2361,24,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.16553e-30;MQSB=0.917775;RPB=0.953586;SGB=177.266;VDB=0.0886602;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.7:6908734 chr07:006908734 0 W/6908734-6908734 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.98475;DP=2547;DP4=1137,1355,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.07991e-08;MQSB=0.621995;RPB=0.813739;SGB=0.908326;VDB=0.47314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.7:6910651 chr07:006910651 0 W/6910651-6910651 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.46969;DP=4734;DP4=2321,2069,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89217e-12;MQSB=0.87493;RPB=0.840272;SGB=-8.26887;VDB=0.20133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.7:6911741 chr07:006911741 0 W/6911741-6911741 FN3631-S SNP A -> C AC=1;AN=190;BQB=0.957738;DP=2837;DP4=1454,1188,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.68829e-08;MQSB=0.826624;RPB=0.533602;SGB=21.1058;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.7:6923831 chr07:006923831 0 W/6923831-6923831 FN3454-S SNP A -> G AC=1;AN=184;BQB=0.935663;DP=2843;DP4=1400,1363,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.129089;MQB=0.725218;MQSB=0.990436;RPB=0.950181;SGB=56.8786;VDB=0.909934;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.7:6924803 chr07:006924803 0 W/6924803-6924803 FN501-S Single Base Substitution A-T INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1748-S.SNP.7:6926373 chr07:006926373 0 W/6926373-6926373 FN1748-S SNP T -> C AC=1;AN=188;BQB=0.612766;DP=4195;DP4=2134,2027,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.35881e-09;MQSB=0.997127;RPB=0.731992;SGB=36.2493;VDB=0.629222;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.7:6932418 chr07:006932418 0 W/6932418-6932418 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2180-S.SNP.7:6933079 chr07:006933079 0 W/6933079-6933079 FN2180-S SNP G -> T AC=1;AN=190;BQB=0.851422;DP=5078;DP4=2538,2184,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.92039e-15;MQSB=0.518449;RPB=0.333568;SGB=21.2038;VDB=0.0703045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.7:6938573 chr07:006938573 0 W/6938573-6938573 FN1407-S Single Base Substitution T-G INTRON HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN821-S.SNP.7:6943716 chr07:006943716 0 W/6943716-6943716 FN821-S Single Base Substitution A-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN1515-S.SNP.7:6949382 chr07:006949382 0 W/6949382-6949382 FN1515-S Single Base Substitution A-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2327.SNP.7:6949692 chr07:006949692 0 W/6949692-6949692 FN2327 SNP C -> T AC=1;AN=192;BQB=0.777337;DP=4853;DP4=2057,2533,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.60294e-07;MQSB=0.879479;RPB=0.43836;SGB=18.6565;VDB=0.0557495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.7:6950256 chr07:006950256 0 W/6950256-6950256 FN1085-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN4203-S.SNP.7:6950892 chr07:006950892 0 W/6950892-6950892 FN4203-S SNP G -> A AC=2;AN=170;BQB=0.999983;DP=2761;DP4=1181,1505,13,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.96477e-13;MQSB=0.996772;RPB=0.713865;SGB=105.627;VDB=0.517218;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A288|533|LOC_Os07g12320|protein_coding|CODING|LOC_Os07g12320.1|1|1) FN2333.SNP.7:6951679 chr07:006951679 0 W/6951679-6951679 FN2333 SNP A -> T AC=1;AN=192;BQB=0.444193;DP=4699;DP4=2323,2081,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.27556e-10;MQSB=0.917058;RPB=0.62035;SGB=-14.7687;VDB=0.614059;EFF=UTR_3_PRIME(MODIFIER||49||533|LOC_Os07g12320|protein_coding|CODING|LOC_Os07g12320.1|1|1) FN-386.SNP.7:6958744 chr07:006958744 0 W/6958744-6958744 FN-386 Single Base Substitution C-T INTRON HOMO SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3862-S.SNP.7:6959375 chr07:006959375 0 W/6959375-6959375 FN3862-S SNP C -> T AC=1;AN=156;BQB=0.156873;DP=2273;DP4=1144,1040,11,4;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=2.04704e-08;MQSB=0.996376;RPB=0.870164;SGB=2.08615;VDB=0.871209;EFF=UTR_3_PRIME(MODIFIER||1528||751|LOC_Os07g12330|protein_coding|CODING|LOC_Os07g12330.1|5|1),UTR_3_PRIME(MODIFIER||65||528|LOC_Os07g12330|protein_coding|CODING|LOC_Os07g12330.2|3|1) FN-142.SNP.7:6960099 chr07:006960099 0 W/6960099-6960099 FN-142 Single Base Substitution A-G INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN552-S.SNP.7:6960847 chr07:006960847 0 W/6960847-6960847 FN552-S Single Base Substitution G-T INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN1505-S.SNP.7:6965784 chr07:006965784 0 W/6965784-6965784 FN1505-S Single Base Substitution C-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2080-S.SNP.7:6966125 chr07:006966125 0 W/6966125-6966125 FN2080-S SNP C -> A AC=1;AN=168;BQB=0.230166;DP=4227;DP4=2249,1924,21,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55361e-14;MQSB=0.968198;RPB=0.486686;SGB=-323.438;VDB=0.92753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.7:6966646 chr07:006966646 0 W/6966646-6966646 FN2432 SNP G -> C AC=1;AN=200;BQB=0.999942;DP=4854;DP4=1966,2554,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.48048e-13;MQSB=0.985565;RPB=0.823177;SGB=25.5416;VDB=0.44231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.7:6973273 chr07:006973273 0 W/6973273-6973273 FN1006-S Single Base Substitution A-T INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN898-S.SNP.7:6982782 chr07:006982782 0 W/6982782-6982782 FN898-S Single Base Substitution T-C INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2372.SNP.7:6984113 chr07:006984113 0 W/6984113-6984113 FN2372 SNP C -> T AC=1;AN=192;BQB=0.315759;DP=5145;DP4=2368,2350,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.06613e-11;MQSB=0.96718;RPB=0.531199;SGB=18.3052;VDB=0.144048;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.7:7007479 chr07:007007479 0 W/7007479-7007479 FN4119-S SNP G -> T AC=1;AN=182;BQB=0.770346;DP=2294;DP4=1082,1156,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.2418e-06;MQSB=0.994438;RPB=0.75348;SGB=44.1115;VDB=0.921324;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.7:7007480 chr07:007007480 0 W/7007480-7007480 FN4119-S SNP A -> T AC=1;AN=182;BQB=0.792197;DP=2296;DP4=1082,1140,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.35075e-06;MQSB=0.99987;RPB=0.786342;SGB=44.1115;VDB=0.916508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.7:7012012 chr07:007012012 0 W/7012012-7012012 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.933302;DP=5192;DP4=2211,2681,11,20;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.13829;MQB=0.980228;MQSB=0;RPB=0.619597;SGB=-76.4433;VDB=0.680413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.7:7013062 chr07:007013062 0 W/7013062-7013062 FN3332-S SNP A -> C AC=1;AN=184;BQB=0.906766;DP=3521;DP4=1700,1544,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0105084;MQB=1.93753e-05;MQSB=0.399426;RPB=0.994203;SGB=28.3187;VDB=0.854591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.7:7016763 chr07:007016763 0 W/7016763-7016763 FN2640-S SNP A -> T AC=1;AN=200;BQB=0.845131;DP=4757;DP4=2270,2297,10,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0157662;MQB=0.00129604;MQSB=0.001394;RPB=0.42915;SGB=47.7211;VDB=0.396622;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L789*|1467|LOC_Os07g12360|protein_coding|CODING|LOC_Os07g12360.1|2|1) FN1109-S.SNP.7:7019045 chr07:007019045 0 W/7019045-7019045 FN1109-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN932-S.SNP.7:7020621 chr07:007020621 0 W/7020621-7020621 FN932-S Single Base Substitution C-T INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2750-S.SNP.7:7020892 chr07:007020892 0 W/7020892-7020892 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.985774;DP=4667;DP4=2263,2140,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41964e-13;MQSB=0.275463;RPB=0.789187;SGB=50.3263;VDB=0.771147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.7:7023146 chr07:007023146 0 W/7023146-7023146 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.520852;DP=3590;DP4=1762,1514,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00362117;MQB=0.000121963;MQSB=0.00208911;RPB=0.852394;SGB=25.7687;VDB=0.597417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1310-S.SNP.7:7036282 chr07:007036282 0 W/7036282-7036282 FN1310-S Single Base Substitution C-A INTRON HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN4143-S.SNP.7:7042647 chr07:007042647 0 W/7042647-7042647 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.98682;DP=2189;DP4=984,1150,5,2;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.000784771;MQSB=0.288153;RPB=0.739889;SGB=25.6601;VDB=0.313883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.7:7053374 chr07:007053374 0 W/7053374-7053374 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.49169;DP=2791;DP4=1147,1488,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.73957e-06;MQSB=0.98438;RPB=0.907964;SGB=23.6597;VDB=0.655006;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.7:7054866 chr07:007054866 0 W/7054866-7054866 FN1029-S Single Base Substitution T-A INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1423-S.SNP.7:7054926 chr07:007054926 0 W/7054926-7054926 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-386.SNP.7:7056838 chr07:007056838 0 W/7056838-7056838 FN-386 Single Base Substitution C-T INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1097-S.SNP.7:7068634 chr07:007068634 0 W/7068634-7068634 FN1097-S Single Base Substitution C-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2209-S.SNP.7:7074701 chr07:007074701 0 W/7074701-7074701 FN2209-S SNP C -> G AC=1;AN=190;BQB=0.12255;DP=4848;DP4=2287,2231,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98677e-06;MQSB=0.917867;RPB=0.49903;SGB=-57.4269;VDB=0.614826;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.7:7075499 chr07:007075499 0 W/7075499-7075499 FN-277 Single Base Substitution A-T INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN2218-S.SNP.7:7075868 chr07:007075868 0 W/7075868-7075868 FN2218-S SNP T -> A AC=1;AN=190;BQB=0.572673;DP=4704;DP4=2155,2377,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.68843e-10;MQSB=0.598753;RPB=0.953116;SGB=62.7569;VDB=0.172728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:7075881 chr07:007075881 0 W/7075881-7075881 FN2218-S SNP T -> A AC=1;AN=190;BQB=0.662381;DP=4728;DP4=2028,2389,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.85007e-12;MQSB=0.774031;RPB=0.999954;SGB=36.4291;VDB=0.706941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.7:7078639 chr07:007078639 0 W/7078639-7078639 FN3796-S SNP C -> T AC=1;AN=190;BQB=0.96929;DP=2722;DP4=1336,1300,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.58446e-08;MQSB=0.229565;RPB=0.417632;SGB=32.5467;VDB=0.515316;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S191L|1531|LOC_Os07g12410|protein_coding|CODING|LOC_Os07g12410.1|1|1) FN3796-S.SNP.7:7078647 chr07:007078647 0 W/7078647-7078647 FN3796-S SNP A -> T AC=1;AN=190;BQB=0.99926;DP=2710;DP4=1337,1307,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.43563e-08;MQSB=0.770217;RPB=0.321764;SGB=49.0954;VDB=0.162154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T194S|1531|LOC_Os07g12410|protein_coding|CODING|LOC_Os07g12410.1|1|1) FN3796-S.SNP.7:7078648 chr07:007078648 0 W/7078648-7078648 FN3796-S SNP C -> T AC=1;AN=190;BQB=0.999974;DP=2700;DP4=1312,1290,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17403e-08;MQSB=0.781235;RPB=0.325691;SGB=36.1006;VDB=0.0903004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T194I|1531|LOC_Os07g12410|protein_coding|CODING|LOC_Os07g12410.1|1|1) FN2583-S.SNP.7:7079888 chr07:007079888 0 W/7079888-7079888 FN2583-S SNP G -> C AC=1;AN=200;BQB=0.00763915;DP=5862;DP4=3033,2418,95,46;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.045377;MQB=1.4013e-45;MQSB=3.99166e-24;RPB=5.97621e-32;SGB=-2801.02;VDB=3.605e-18;EFF=INTRON(MODIFIER||||1531|LOC_Os07g12410|protein_coding|CODING|LOC_Os07g12410.1|2|1) FN1154-S.SNP.7:7081866 chr07:007081866 0 W/7081866-7081866 FN1154-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g12410 retrotransposon protein, putative, unclassified, expressed SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN3438-S.SNP.7:7089085 chr07:007089085 0 W/7089085-7089085 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.943168;DP=2447;DP4=1287,1058,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60586e-05;MQSB=0.528352;RPB=0.890795;SGB=-2.32838;VDB=0.177966;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.7:7090267 chr07:007090267 0 W/7090267-7090267 FN984-S Single Base Substitution C-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN874-S.SNP.7:7101964 chr07:007101964 0 W/7101964-7101964 FN874-S Single Base Substitution C-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN-137.SNP.7:7102858 chr07:007102858 0 W/7102858-7102858 FN-137 Single Base Substitution A-T INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2410.SNP.7:7106783 chr07:007106783 0 W/7106783-7106783 FN2410 SNP T -> C AC=2;AN=200;BQB=0.744372;DP=4169;DP4=1524,2257,18,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.3222e-23;MQSB=0.922217;RPB=0.437752;SGB=59.2502;VDB=0.162422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.7:7120952 chr07:007120952 0 W/7120952-7120952 FN2390 SNP T -> A AC=2;AN=200;BQB=0.990987;DP=3957;DP4=1725,1934,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.87669e-22;MQSB=0.856071;RPB=0.104635;SGB=86.7987;VDB=0.0674373;EFF=INTRON(MODIFIER||||286|LOC_Os07g12490|protein_coding|CODING|LOC_Os07g12490.1|1|1) FN838-S.SNP.7:7126827 chr07:007126827 0 W/7126827-7126827 FN838-S Single Base Substitution G-T INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN576-S.SNP.7:7126831 chr07:007126831 0 W/7126831-7126831 FN576-S Single Base Substitution G-A INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3446-S.SNP.7:7145852 chr07:007145852 0 W/7145852-7145852 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.924585;DP=2899;DP4=1418,1386,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48071e-09;MQSB=0.982907;RPB=0.746326;SGB=62.3078;VDB=0.737392;EFF=INTRON(MODIFIER||||835|LOC_Os07g12520|protein_coding|CODING|LOC_Os07g12520.1|1|1) FN2554-S.SNP.7:7151559 chr07:007151559 0 W/7151559-7151559 FN2554-S SNP T -> C AC=1;AN=198;BQB=0.72868;DP=4077;DP4=2042,1848,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.87139e-12;MQSB=0.876382;RPB=0.805569;SGB=58.1246;VDB=0.406363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.7:7158462 chr07:007158462 0 W/7158462-7158462 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.626829;DP=3645;DP4=1567,1697,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000104932;MQSB=0.0324913;RPB=0.589101;SGB=15.9981;VDB=0.242177;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.7:7162950 chr07:007162950 0 W/7162950-7162950 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.744583;DP=5471;DP4=2356,2903,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.36442e-07;MQSB=0.962692;RPB=0.899793;SGB=29.4541;VDB=0.940425;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.7:7172121 chr07:007172121 0 W/7172121-7172121 FN978-S Single Base Substitution T-C INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1586-S.SNP.7:7174848 chr07:007174848 0 W/7174848-7174848 FN1586-S Single Base Substitution T-C INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1285-S.SNP.7:7175061 chr07:007175061 0 W/7175061-7175061 FN1285-S Single Base Substitution G-T INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN449-S.SNP.7:7179562 chr07:007179562 0 W/7179562-7179562 FN449-S Single Base Substitution T-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN2265-S.SNP.7:7189420 chr07:007189420 0 W/7189420-7189420 FN2265-S SNP A -> T AC=1;AN=190;BQB=0.947291;DP=4525;DP4=1691,2471,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56132e-13;MQSB=0.0158759;RPB=0.800967;SGB=103.624;VDB=0.397107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.7:7192072 chr07:007192072 0 W/7192072-7192072 FN2281 SNP G -> A AC=1;AN=192;BQB=0.595855;DP=4832;DP4=2475,1962,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.54938e-18;MQSB=0.560589;RPB=0.362097;SGB=67.3792;VDB=0.662665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.7:7198081 chr07:007198081 0 W/7198081-7198081 FN3478-S SNP G -> T AC=1;AN=184;BQB=0.221393;DP=2981;DP4=1601,1290,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.33727e-08;MQSB=0.976929;RPB=0.971871;SGB=33.3622;VDB=0.395807;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.7:7209870 chr07:007209870 0 W/7209870-7209870 FN-178 Single Base Substitution G-T INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3666-S.SNP.7:7211985 chr07:007211985 0 W/7211985-7211985 FN3666-S SNP A -> G AC=1;AN=190;BQB=0.992969;DP=2901;DP4=1537,1251,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.82233e-15;MQSB=0.924384;RPB=0.992831;SGB=99.1879;VDB=0.7277;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.7:7213071 chr07:007213071 0 W/7213071-7213071 FN508-S Single Base Substitution G-T INTERGENIC HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN4101-S.SNP.7:7213718 chr07:007213718 0 W/7213718-7213718 FN4101-S SNP T -> A AC=2;AN=182;BQB=0.969402;DP=2983;DP4=1477,1427,7,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.81877e-09;MQSB=0.977462;RPB=0.913093;SGB=57.644;VDB=0.677448;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.7:7218999 chr07:007218999 0 W/7218999-7218999 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2596-S.SNP.7:7219007 chr07:007219007 0 W/7219007-7219007 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.910779;DP=4192;DP4=2081,1800,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.24311e-11;MQSB=0.959597;RPB=0.716723;SGB=18.9201;VDB=0.923168;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.7:7219100 chr07:007219100 0 W/7219100-7219100 FN-153 Single Base Substitution T-C INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2117-S.SNP.7:7221947 chr07:007221947 0 W/7221947-7221947 FN2117-S SNP G -> C AC=1;AN=168;BQB=0.596869;DP=2976;DP4=1529,1393,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00194056;MQSB=0.127379;RPB=0.983128;SGB=10.0307;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.7:7223584 chr07:007223584 0 W/7223584-7223584 FN1689-S SNP T -> C AC=2;AN=188;BQB=0.335316;DP=3952;DP4=2094,1799,25,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.45671e-23;MQSB=0.989311;RPB=0.898499;SGB=-49.6956;VDB=0.897945;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.7:7246061 chr07:007246061 0 W/7246061-7246061 FN-286 Single Base Substitution G-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-286.SNP.7:7246062 chr07:007246062 0 W/7246062-7246062 FN-286 Single Base Substitution C-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2351.SNP.7:7254892 chr07:007254892 0 W/7254892-7254892 FN2351 SNP C -> T AC=2;AN=192;BQB=0.260641;DP=4920;DP4=2454,2180,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.33592e-28;MQSB=0.649932;RPB=0.120319;SGB=157.404;VDB=0.212082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.7:7254893 chr07:007254893 0 W/7254893-7254893 FN2351 SNP C -> T AC=2;AN=192;BQB=0.347802;DP=4943;DP4=2438,2192,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.89823e-29;MQSB=0.537113;RPB=0.087495;SGB=157.404;VDB=0.207715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.7:7270827 chr07:007270827 0 W/7270827-7270827 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1545-S.SNP.7:7270828 chr07:007270828 0 W/7270828-7270828 FN1545-S Single Base Substitution G-C INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN_814-7-1.SNP.7:7273187 chr07:007273187 0 W/7273187-7273187 FN_814-7-1 Single Base Substitution C-A Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2207-S.SNP.7:7276029 chr07:007276029 0 W/7276029-7276029 FN2207-S SNP C -> T AC=1;AN=190;BQB=0.914152;DP=4400;DP4=2211,1934,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000227273;MQB=0.000593177;MQSB=0.0119274;RPB=0.974701;SGB=30.8803;VDB=0.49048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.7:7277729 chr07:007277729 0 W/7277729-7277729 FN2356 SNP T -> C AC=1;AN=192;BQB=0.734006;DP=5157;DP4=2541,2230,8,18;HOB=5.42535e-05;ICB=0.000109072;MQ=27;MQ0F=0.266046;MQB=0.152655;MQSB=0;RPB=0.770101;SGB=-9.12519;VDB=0.926699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.7:7286190 chr07:007286190 0 W/7286190-7286190 FN2179-S SNP G -> A AC=1;AN=168;BQB=0.128806;DP=2769;DP4=850,1891,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02996e-05;MQSB=0.545108;RPB=0.998076;SGB=-1.53256;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.7:7289157 chr07:007289157 0 W/7289157-7289157 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.736087;DP=2468;DP4=1247,1101,19,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.27528e-12;MQSB=0.479837;RPB=0.992283;SGB=18.5195;VDB=0.869506;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.7:7296201 chr07:007296201 0 W/7296201-7296201 FN996-S Single Base Substitution T-C INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN-410.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN-410 Single Base Substitution C-T INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-42.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN-42 Single Base Substitution C-T INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1388-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN1388-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1565-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN1565-S Single Base Substitution C-T INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2596-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.515501;DP=4130;DP4=1922,2010,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.44635e-08;MQSB=0.998904;RPB=0.287084;SGB=47.3393;VDB=0.908907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN3578-S SNP C -> T AC=1;AN=188;BQB=0.995867;DP=3008;DP4=1270,1681,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.62252e-09;MQSB=0.996029;RPB=0.358926;SGB=26.0762;VDB=0.776679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN3600-S SNP C -> T AC=2;AN=190;BQB=0.676337;DP=2776;DP4=1262,1407,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.99647e-14;MQSB=0.967514;RPB=0.940543;SGB=100.07;VDB=0.473952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN3772-S SNP C -> T AC=2;AN=190;BQB=0.950082;DP=2792;DP4=1191,1505,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.96762e-12;MQSB=0.999524;RPB=0.949912;SGB=38.983;VDB=0.663035;EFF=INTERGENIC(MODIFIER||||||||||1) FN410-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN410-S Single Base Substitution C-T INTERGENIC HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN439-S Single Base Substitution C-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN623-S.SNP.7:7296632 chr07:007296632 0 W/7296632-7296632 FN623-S Single Base Substitution C-T INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN-159.SNP.7:7300003 chr07:007300003 0 W/7300003-7300003 FN-159 Single Base Substitution A-T INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2619-S.SNP.7:7304384 chr07:007304384 0 W/7304384-7304384 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.107723;DP=2908;DP4=1276,1119,45,32;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00103164;MQB=3.80879e-35;MQSB=0.740819;RPB=6.14823e-12;SGB=-793.56;VDB=8.86662e-14;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.7:7306078 chr07:007306078 0 W/7306078-7306078 FN3826-S SNP C -> G AC=1;AN=190;BQB=0.859929;DP=2914;DP4=1401,1420,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16318e-11;MQSB=0.418249;RPB=0.90598;SGB=57.4238;VDB=0.250734;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.7:7313655 chr07:007313655 0 W/7313655-7313655 FN-182 Single Base Substitution C-A UTR_5_PRIME HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN848-S.SNP.7:7323837 chr07:007323837 0 W/7323837-7323837 FN848-S Single Base Substitution T-G INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4050-S.SNP.7:7335233 chr07:007335233 0 W/7335233-7335233 FN4050-S SNP G -> A AC=2;AN=168;BQB=0.792499;DP=2626;DP4=1345,1139,15,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.67886e-17;MQSB=0.940892;RPB=0.818732;SGB=103.364;VDB=0.954305;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.7:7340213 chr07:007340213 0 W/7340213-7340213 FN-180 Single Base Substitution C-T INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN881-S.SNP.7:7350280 chr07:007350280 0 W/7350280-7350280 FN881-S Single Base Substitution A-G INTRON HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1061-S.SNP.7:7352871 chr07:007352871 0 W/7352871-7352871 FN1061-S Single Base Substitution C-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2638-S.SNP.7:7354778 chr07:007354778 0 W/7354778-7354778 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.904244;DP=4829;DP4=2304,2239,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.75338e-07;MQSB=0.924741;RPB=0.960094;SGB=40.4492;VDB=0.052315;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.7:7359318 chr07:007359318 0 W/7359318-7359318 FN944-S Single Base Substitution T-A INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3518-S.SNP.7:7359700 chr07:007359700 0 W/7359700-7359700 FN3518-S SNP T -> C AC=1;AN=188;BQB=0.993522;DP=2919;DP4=1466,1388,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.66868e-08;MQSB=0.497944;RPB=0.795736;SGB=35.9843;VDB=0.235208;EFF=INTRON(MODIFIER||||1072|LOC_Os07g12840|protein_coding|CODING|LOC_Os07g12840.1|2|1) FN1314-S.SNP.7:7359871 chr07:007359871 0 W/7359871-7359871 FN1314-S Single Base Substitution C-T INTRON HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-203.SNP.7:7359925 chr07:007359925 0 W/7359925-7359925 FN-203 Single Base Substitution T-G INTRON HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN506-S.SNP.7:7377199 chr07:007377199 0 W/7377199-7377199 FN506-S Single Base Substitution A-G INTRON HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2181-S.SNP.7:7377206 chr07:007377206 0 W/7377206-7377206 FN2181-S SNP C -> T AC=1;AN=190;BQB=0.71497;DP=4027;DP4=1822,1949,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.0365036;MQB=0.686161;MQSB=0;RPB=0.937535;SGB=62.7569;VDB=0.97943;EFF=INTRON(MODIFIER||||1558|LOC_Os07g12860|protein_coding|CODING|LOC_Os07g12860.1|8|1) FN1282-S.SNP.7:7379412 chr07:007379412 0 W/7379412-7379412 FN1282-S Single Base Substitution C-G INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN-272.SNP.7:7380734 chr07:007380734 0 W/7380734-7380734 FN-272 Single Base Substitution T-C INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2174-S.SNP.7:7383628 chr07:007383628 0 W/7383628-7383628 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.0195389;DP=3457;DP4=1297,2128,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.93917e-05;MQSB=0.997788;RPB=0.998447;SGB=-14.9417;VDB=0.476625;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.7:7385955 chr07:007385955 0 W/7385955-7385955 FN868-S Single Base Substitution G-T INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3844-S.SNP.7:7392101 chr07:007392101 0 W/7392101-7392101 FN3844-S SNP G -> A AC=2;AN=190;BQB=0.92674;DP=2950;DP4=1427,1444,5,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.86349e-08;MQSB=0.0809663;RPB=0.120084;SGB=36.1006;VDB=0.0577125;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q214*|390|LOC_Os07g12880|protein_coding|CODING|LOC_Os07g12880.1|2|1) FN985-S.SNP.7:7399680 chr07:007399680 0 W/7399680-7399680 FN985-S Single Base Substitution T-A INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2105-S.SNP.7:7400517 chr07:007400517 0 W/7400517-7400517 FN2105-S SNP G -> C AC=1;AN=168;BQB=0.215704;DP=3447;DP4=1735,1672,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53838e-07;MQSB=0.954743;RPB=0.437518;SGB=-40.0741;VDB=0.770257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.7:7402342 chr07:007402342 0 W/7402342-7402342 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.827108;DP=3842;DP4=1751,2034,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.32294e-18;MQSB=0.986713;RPB=0.873852;SGB=56.5957;VDB=0.962998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.7:7405791 chr07:007405791 0 W/7405791-7405791 FN2401 SNP C -> G AC=1;AN=200;BQB=0.581497;DP=4372;DP4=2323,1870,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000228728;MQB=2.54988e-13;MQSB=0.313626;RPB=0.997516;SGB=95.7111;VDB=0.980476;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G990A|1004|LOC_Os07g12900|protein_coding|CODING|LOC_Os07g12900.1|7|1) FN4231-S.SNP.7:7410709 chr07:007410709 0 W/7410709-7410709 FN4231-S SNP T -> C AC=1;AN=170;BQB=0.980554;DP=2324;DP4=1243,1036,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.30814e-06;MQSB=0.841189;RPB=0.780651;SGB=21.1076;VDB=0.144271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.7:7426338 chr07:007426338 0 W/7426338-7426338 FN2458 SNP G -> A AC=1;AN=200;BQB=0.208856;DP=4026;DP4=1921,1918,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.73386e-07;MQSB=0.603317;RPB=0.999781;SGB=40.2696;VDB=0.703613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M61I|89|LOC_Os07g12940|protein_coding|CODING|LOC_Os07g12940.1|2|1) FN3698-S.SNP.7:7428531 chr07:007428531 0 W/7428531-7428531 FN3698-S SNP A -> T AC=1;AN=190;BQB=0.890246;DP=2955;DP4=1366,1464,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00169205;MQB=4.78997e-09;MQSB=0.84172;RPB=0.899287;SGB=62.7569;VDB=0.424233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.7:7430685 chr07:007430685 0 W/7430685-7430685 FN3871-S SNP G -> T AC=2;AN=158;BQB=0.948013;DP=2304;DP4=1154,1045,11,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.82589e-11;MQSB=0.999181;RPB=0.820791;SGB=90.7616;VDB=0.911683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G374C|994|LOC_Os07g12950|protein_coding|CODING|LOC_Os07g12950.1|4|1) FN594-S.SNP.7:7433393 chr07:007433393 0 W/7433393-7433393 FN594-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g12950 transposon protein, putative, unclassified, expressed SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2146-S.SNP.7:7439979 chr07:007439979 0 W/7439979-7439979 FN2146-S SNP G -> C AC=1;AN=168;BQB=0.354172;DP=3875;DP4=1854,1976,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05679e-09;MQSB=0.985761;RPB=0.668727;SGB=-41.7816;VDB=0.55775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.7:7440457 chr07:007440457 0 W/7440457-7440457 FN2266-S SNP A -> C AC=1;AN=190;BQB=0.671284;DP=5354;DP4=2469,2586,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0113934;MQB=0.00080367;MQSB=0.819271;RPB=0.629168;SGB=49.0954;VDB=0.200231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.7:7442818 chr07:007442818 0 W/7442818-7442818 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.961403;DP=2962;DP4=1413,1466,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00135044;MQB=0.00776885;MQSB=0.0242362;RPB=0.648441;SGB=28.8977;VDB=0.637461;EFF=INTRON(MODIFIER||||660|LOC_Os07g12970|protein_coding|CODING|LOC_Os07g12970.1|3|1) FN1708-S.SNP.7:7444214 chr07:007444214 0 W/7444214-7444214 FN1708-S SNP C -> T AC=2;AN=188;BQB=0.987357;DP=3016;DP4=1349,1614,9,20;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00828912;MQB=4.56945e-08;MQSB=0.98936;RPB=0.387459;SGB=59.139;VDB=0.410081;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H517|660|LOC_Os07g12970|protein_coding|CODING|LOC_Os07g12970.1|7|1) FN1739-S.SNP.7:7447494 chr07:007447494 0 W/7447494-7447494 FN1739-S SNP C -> G AC=1;AN=188;BQB=0.771999;DP=3661;DP4=1717,1891,12,15;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0570882;MQB=0.140664;MQSB=1.10919e-23;RPB=0.878159;SGB=22.5144;VDB=0.569904;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R701T|1518|LOC_Os07g12980|protein_coding|CODING|LOC_Os07g12980.1|3|1) FN1028-S.SNP.7:7451764 chr07:007451764 0 W/7451764-7451764 FN1028-S Single Base Substitution T-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2424.SNP.7:7455833 chr07:007455833 0 W/7455833-7455833 FN2424 SNP G -> A AC=1;AN=200;BQB=0.000865546;DP=3520;DP4=1538,1713,10,4;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.155398;MQB=0.579763;MQSB=3.35486e-12;RPB=0.438631;SGB=40.2696;VDB=0.168526;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.7:7462760 chr07:007462760 0 W/7462760-7462760 FN239-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3786-S.SNP.7:7464412 chr07:007464412 0 W/7464412-7464412 FN3786-S SNP A -> G AC=1;AN=190;BQB=0.732312;DP=2540;DP4=1413,1056,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000393701;MQB=9.31284e-05;MQSB=0.715633;RPB=0.676501;SGB=44.5415;VDB=0.59927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K318E|814|LOC_Os07g13010|protein_coding|CODING|LOC_Os07g13010.1|6|1) FN2221-S.SNP.7:7468840 chr07:007468840 0 W/7468840-7468840 FN2221-S SNP C -> T AC=2;AN=190;BQB=0.948174;DP=4995;DP4=2381,2084,40,23;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.001001;MQB=2.70161e-25;MQSB=0.00019646;RPB=0.923973;SGB=78.6972;VDB=0.651092;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.7:7469308 chr07:007469308 0 W/7469308-7469308 FN1011-S Single Base Substitution T-C INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN378-S.SNP.7:7476504 chr07:007476504 0 W/7476504-7476504 FN378-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13040 expressed protein SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN3430-S.SNP.7:7477503 chr07:007477503 0 W/7477503-7477503 FN3430-S SNP A -> T AC=2;AN=182;BQB=0.998318;DP=2499;DP4=813,1534,10,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.19011e-14;MQSB=0.941282;RPB=0.926735;SGB=22.0202;VDB=0.126643;EFF=INTRON(MODIFIER||||171|LOC_Os07g13040|protein_coding|CODING|LOC_Os07g13040.1|1|1) FN1286-S.SNP.7:7480146 chr07:007480146 0 W/7480146-7480146 FN1286-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1036-S.SNP.7:7482753 chr07:007482753 0 W/7482753-7482753 FN1036-S Single Base Substitution A-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1319-S.SNP.7:7486370 chr07:007486370 0 W/7486370-7486370 FN1319-S Single Base Substitution C-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN-286.SNP.7:7489049 chr07:007489049 0 W/7489049-7489049 FN-286 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g13060 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN449-S.SNP.7:7490280 chr07:007490280 0 W/7490280-7490280 FN449-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13060 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3531-S.SNP.7:7496246 chr07:007496246 0 W/7496246-7496246 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.458766;DP=3048;DP4=1522,1457,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.77591e-05;MQSB=0.998491;RPB=0.0308557;SGB=15.903;VDB=0.221633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A80T|591|LOC_Os07g13080|protein_coding|CODING|LOC_Os07g13080.1|1|1) FN405-S.SNP.7:7498752 chr07:007498752 0 W/7498752-7498752 FN405-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1200-S.SNP.7:7502150 chr07:007502150 0 W/7502150-7502150 FN1200-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g13100 DNA binding protein, putative, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3855-S.SNP.7:7511055 chr07:007511055 0 W/7511055-7511055 FN3855-S SNP C -> A AC=1;AN=158;BQB=0.915864;DP=2051;DP4=1041,893,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.40259e-07;MQSB=0.998381;RPB=0.153676;SGB=34.0735;VDB=0.252301;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S819Y|1628|LOC_Os07g13120|protein_coding|CODING|LOC_Os07g13120.1|2|1) FN439-S.SNP.7:7515798 chr07:007515798 0 W/7515798-7515798 FN439-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g13130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1035-S.SNP.7:7534815 chr07:007534815 0 W/7534815-7534815 FN1035-S Single Base Substitution T-C INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. W360-2S-2.SNP.7:7535799 chr07:007535799 0 W/7535799-7535799 W360-2S-2 Single Base Substitution T-C INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1449-S.SNP.7:7537021 chr07:007537021 0 W/7537021-7537021 FN1449-S Single Base Substitution A-G INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN-13.SNP.7:7537271 chr07:007537271 0 W/7537271-7537271 FN-13 Single Base Substitution A-G INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1318-S.SNP.7:7549491 chr07:007549491 0 W/7549491-7549491 FN1318-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2469.SNP.7:7552264 chr07:007552264 0 W/7552264-7552264 FN2469 SNP G -> T AC=1;AN=200;BQB=0.978519;DP=5222;DP4=2692,2257,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30227e-08;MQSB=0.896294;RPB=0.102825;SGB=54.2646;VDB=0.073411;EFF=INTRON(MODIFIER||||153|LOC_Os07g13180|protein_coding|CODING|LOC_Os07g13180.1|2|1) FN3770-S.SNP.7:7556896 chr07:007556896 0 W/7556896-7556896 FN3770-S SNP C -> T AC=2;AN=190;BQB=0.747916;DP=2910;DP4=1363,1442,13,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.07587e-15;MQSB=0.922289;RPB=0.367557;SGB=131.065;VDB=0.342635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.7:7558384 chr07:007558384 0 W/7558384-7558384 FN2671-S SNP T -> C AC=1;AN=200;BQB=0.617262;DP=4296;DP4=1983,1874,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70328e-10;MQSB=0.64592;RPB=0.766951;SGB=26.8797;VDB=0.686055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.7:7559716 chr07:007559716 0 W/7559716-7559716 FN3422-S SNP C -> T AC=1;AN=182;BQB=0.985135;DP=2833;DP4=1336,1405,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.84066e-08;MQSB=0.996861;RPB=0.99999;SGB=32.2261;VDB=0.244287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.7:7563477 chr07:007563477 0 W/7563477-7563477 FN2213-S SNP C -> A AC=1;AN=190;BQB=0.859181;DP=4754;DP4=2248,2184,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000420698;MQB=1.37933e-10;MQSB=0.998884;RPB=0.589431;SGB=80.9724;VDB=0.479824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.7:7564195 chr07:007564195 0 W/7564195-7564195 FN2385 SNP A -> G AC=2;AN=192;BQB=0.972978;DP=5001;DP4=2292,2220,32,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.22347e-30;MQSB=0.190936;RPB=0.828065;SGB=8.93395;VDB=0.921925;EFF=INTERGENIC(MODIFIER||||||||||1) FN596-S.SNP.7:7566255 chr07:007566255 0 W/7566255-7566255 FN596-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g13190 retrotransposon protein, putative, unclassified, expressed SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2465.SNP.7:7572215 chr07:007572215 0 W/7572215-7572215 FN2465 SNP G -> A AC=1;AN=200;BQB=0.422661;DP=4199;DP4=2155,1810,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.44449e-09;MQSB=0.304935;RPB=0.819332;SGB=26.8797;VDB=0.512648;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.7:7575046 chr07:007575046 0 W/7575046-7575046 FN3849-S SNP C -> T AC=2;AN=158;BQB=0.984878;DP=2371;DP4=1116,1157,8,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.68803e-09;MQSB=0.977531;RPB=0.942274;SGB=50.9207;VDB=0.525685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.7:7575511 chr07:007575511 0 W/7575511-7575511 FN3331-S SNP G -> A AC=1;AN=184;BQB=0.920198;DP=3187;DP4=1584,1507,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.98919e-06;MQSB=0.966339;RPB=0.526724;SGB=35.1773;VDB=0.369599;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P96L|121|LOC_Os07g13220|protein_coding|CODING|LOC_Os07g13220.1|1|1) FN2296.SNP.7:7577293 chr07:007577293 0 W/7577293-7577293 FN2296 SNP G -> A AC=2;AN=192;BQB=0.610244;DP=5148;DP4=2154,2671,28,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.07149e-33;MQSB=0.985858;RPB=0.949565;SGB=71.4931;VDB=0.00387236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.7:7594349 chr07:007594349 0 W/7594349-7594349 FN2407 SNP G -> A AC=2;AN=200;BQB=0.769954;DP=4439;DP4=2136,2043,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.85112e-25;MQSB=0.959294;RPB=0.799947;SGB=137.609;VDB=0.11073;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.7:7596380 chr07:007596380 0 W/7596380-7596380 FN671-S Single Base Substitution A-C INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN671-S.SNP.7:7596381 chr07:007596381 0 W/7596381-7596381 FN671-S Single Base Substitution C-A INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2136-S.SNP.7:7596647 chr07:007596647 0 W/7596647-7596647 FN2136-S SNP A -> G AC=1;AN=168;BQB=0.329893;DP=3602;DP4=1685,1868,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.0835e-14;MQSB=0.813146;RPB=0.494056;SGB=-116.046;VDB=0.106044;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.7:7601327 chr07:007601327 0 W/7601327-7601327 FN962-S Single Base Substitution G-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN-171.SNP.7:7602798 chr07:007602798 0 W/7602798-7602798 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN4158-S.SNP.7:7603139 chr07:007603139 0 W/7603139-7603139 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.78567;DP=2540;DP4=1348,1139,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23755e-08;MQSB=0.999938;RPB=0.467966;SGB=34.878;VDB=0.801847;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.7:7605918 chr07:007605918 0 W/7605918-7605918 FN-13 Single Base Substitution A-G INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-156.SNP.7:7614273 chr07:007614273 0 W/7614273-7614273 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-192.SNP.7:7615284 chr07:007615284 0 W/7615284-7615284 FN-192 Single Base Substitution C-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2768-S.SNP.7:7621672 chr07:007621672 0 W/7621672-7621672 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.660524;DP=3887;DP4=1912,1804,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000257268;MQB=1.0966e-06;MQSB=0.943219;RPB=0.952226;SGB=40.3588;VDB=0.0735697;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G6R|225|LOC_Os07g13270|protein_coding|CODING|LOC_Os07g13270.1|1|1) FN3347-S.SNP.7:7633180 chr07:007633180 0 W/7633180-7633180 FN3347-S SNP C -> A AC=1;AN=184;BQB=0.988479;DP=2512;DP4=1157,1238,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33561e-09;MQSB=0.957728;RPB=0.454807;SGB=42.7914;VDB=0.621909;EFF=INTRON(MODIFIER||||277|LOC_Os07g13280|protein_coding|CODING|LOC_Os07g13280.1|2|1),INTRON(MODIFIER||||201|LOC_Os07g13280|protein_coding|CODING|LOC_Os07g13280.2|2|1) W450-6-1.SNP.7:7636052 chr07:007636052 0 W/7636052-7636052 W450-6-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2337.SNP.7:7637842 chr07:007637842 0 W/7637842-7637842 FN2337 SNP G -> T AC=1;AN=192;BQB=0.779891;DP=4862;DP4=2473,2160,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.14234e-15;MQSB=0.952652;RPB=0.992074;SGB=78.9878;VDB=0.633361;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.7:7639948 chr07:007639948 0 W/7639948-7639948 FN_807-3-1 Single Base Substitution C-G Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2754-S.SNP.7:7643151 chr07:007643151 0 W/7643151-7643151 FN2754-S SNP A -> T AC=1;AN=200;BQB=0.705965;DP=5123;DP4=2614,2300,18,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01538e-13;MQSB=0.250885;RPB=0.9585;SGB=104.921;VDB=0.52706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.7:7644064 chr07:007644064 0 W/7644064-7644064 FN1506-S Single Base Substitution C-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3775-S.SNP.7:7645494 chr07:007645494 0 W/7645494-7645494 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.994077;DP=2906;DP4=1583,1178,13,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.98446e-10;MQSB=0.999934;RPB=0.803612;SGB=85.5263;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.7:7653099 chr07:007653099 0 W/7653099-7653099 FN511-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1344-S.SNP.7:7654026 chr07:007654026 0 W/7654026-7654026 FN1344-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2628-S.SNP.7:7658135 chr07:007658135 0 W/7658135-7658135 FN2628-S SNP A -> G AC=2;AN=200;BQB=0.72599;DP=5031;DP4=2284,2464,22,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.20042e-32;MQSB=0.40654;RPB=0.930634;SGB=247.682;VDB=0.949768;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.7:7659656 chr07:007659656 0 W/7659656-7659656 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1496-S.SNP.7:7663724 chr07:007663724 0 W/7663724-7663724 FN1496-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os07g13350 retrotransposon protein, putative, unclassified, expressed SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1496-S.SNP.7:7663725 chr07:007663725 0 W/7663725-7663725 FN1496-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os07g13350 retrotransposon protein, putative, unclassified, expressed SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN4208-S.SNP.7:7663914 chr07:007663914 0 W/7663914-7663914 FN4208-S SNP C -> A AC=2;AN=170;BQB=0.999556;DP=2399;DP4=1133,1198,11,6;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00041684;MQB=6.10007e-10;MQSB=0.602251;RPB=0.821508;SGB=27.2119;VDB=0.86747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W90L|776|LOC_Os07g13350|protein_coding|CODING|LOC_Os07g13350.1|2|1) FN576-S.SNP.7:7665599 chr07:007665599 0 W/7665599-7665599 FN576-S Single Base Substitution T-C INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN-83.SNP.7:7668133 chr07:007668133 0 W/7668133-7668133 FN-83 Single Base Substitution A-T INTERGENIC HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3827-S.SNP.7:7674643 chr07:007674643 0 W/7674643-7674643 FN3827-S SNP G -> A AC=1;AN=190;BQB=0.788499;DP=2299;DP4=1204,993,1,13;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0217486;MQB=0.415456;MQSB=4.46083e-36;RPB=0.964795;SGB=39.6545;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.7:7681239 chr07:007681239 0 W/7681239-7681239 FN484-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g13390 transposon protein, putative, unclassified, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2639-S.SNP.7:7682422 chr07:007682422 0 W/7682422-7682422 FN2639-S SNP G -> T AC=1;AN=200;BQB=0.731993;DP=4722;DP4=2253,2224,15,13;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.174714;MQB=0.935094;MQSB=1.24804e-05;RPB=0.438187;SGB=90.7419;VDB=0.832485;EFF=INTRON(MODIFIER||||1467|LOC_Os07g13390|protein_coding|CODING|LOC_Os07g13390.1|12|1) FN317-S.SNP.7:7686451 chr07:007686451 0 W/7686451-7686451 FN317-S Single Base Substitution T-G INTERGENIC HET SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN1150-S.SNP.7:7690239 chr07:007690239 0 W/7690239-7690239 FN1150-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g13400 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN534-S.SNP.7:7704975 chr07:007704975 0 W/7704975-7704975 FN534-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1284-S.SNP.7:7708818 chr07:007708818 0 W/7708818-7708818 FN1284-S Single Base Substitution C-G INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN1368-S.SNP.7:7709894 chr07:007709894 0 W/7709894-7709894 FN1368-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1154-S.SNP.7:7725685 chr07:007725685 0 W/7725685-7725685 FN1154-S Single Base Substitution T-C INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1057-S.SNP.7:7728565 chr07:007728565 0 W/7728565-7728565 FN1057-S Single Base Substitution G-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-114.SNP.7:7729474 chr07:007729474 0 W/7729474-7729474 FN-114 Single Base Substitution G-T INTRON HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN3537-S.SNP.7:7730403 chr07:007730403 0 W/7730403-7730403 FN3537-S SNP A -> G AC=1;AN=188;BQB=0.938536;DP=2717;DP4=1386,1196,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.00027e-05;MQSB=0.716676;RPB=0.699;SGB=26.2637;VDB=0.0135752;EFF=INTRON(MODIFIER||||220|LOC_Os07g13490|protein_coding|CODING|LOC_Os07g13490.1|2|1) FN917-S.SNP.7:7746761 chr07:007746761 0 W/7746761-7746761 FN917-S Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3732-S.SNP.7:7756001 chr07:007756001 0 W/7756001-7756001 FN3732-S SNP T -> A AC=1;AN=190;BQB=0.724422;DP=3224;DP4=1428,1643,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.99433e-08;MQSB=0.953644;RPB=0.996817;SGB=21.1058;VDB=0.951383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T570S|720|LOC_Os07g13540|protein_coding|CODING|LOC_Os07g13540.1|1|1) FN1647-S.SNP.7:7762598 chr07:007762598 0 W/7762598-7762598 FN1647-S Single Base Substitution A-T INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN4221-S.SNP.7:7762954 chr07:007762954 0 W/7762954-7762954 FN4221-S SNP C -> T AC=1;AN=170;BQB=0.974803;DP=2654;DP4=1379,1215,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.45188e-07;MQSB=0.943728;RPB=0.93413;SGB=47.8722;VDB=0.540782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.7:7779782 chr07:007779782 0 W/7779782-7779782 FN1463-S Single Base Substitution T-G INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2241-S.SNP.7:7784587 chr07:007784587 0 W/7784587-7784587 FN2241-S SNP G -> T AC=1;AN=190;BQB=0.751731;DP=5164;DP4=2339,2415,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12076e-07;MQSB=0.478324;RPB=0.660201;SGB=28.9929;VDB=0.720456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.7:7786508 chr07:007786508 0 W/7786508-7786508 FN2348 SNP G -> T AC=2;AN=192;BQB=0.1999;DP=4546;DP4=1874,2388,19,31;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=3.75686e-14;MQSB=0.00972146;RPB=0.840509;SGB=168.097;VDB=0.0277113;EFF=INTERGENIC(MODIFIER||||||||||1) FN1741-S.SNP.7:7800164 chr07:007800164 0 W/7800164-7800164 FN1741-S SNP G -> A AC=1;AN=188;BQB=0.905114;DP=1904;DP4=778,1099,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00095407;MQSB=0.99748;RPB=0.917014;SGB=14.7255;VDB=0.548241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.7:7800486 chr07:007800486 0 W/7800486-7800486 FN3714-S SNP C -> G AC=1;AN=190;BQB=0.339263;DP=2356;DP4=1149,1113,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000110665;MQSB=0.996802;RPB=0.779302;SGB=49.0954;VDB=0.345999;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.7:7804923 chr07:007804923 0 W/7804923-7804923 FN-178 Single Base Substitution C-T INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1233-S.SNP.7:7805202 chr07:007805202 0 W/7805202-7805202 FN1233-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3448-S.SNP.7:7820723 chr07:007820723 0 W/7820723-7820723 FN3448-S SNP G -> C AC=2;AN=184;BQB=0.947015;DP=4825;DP4=2382,2309,21,16;HOB=0.0215028;ICB=0.494625;MQ=37;MQ0F=0.0109845;MQB=0.0535154;MQSB=3.61633e-11;RPB=0.642673;SGB=161.787;VDB=0.706976;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN-42.SNP.7:7823510 chr07:007823510 0 W/7823510-7823510 FN-42 Single Base Substitution G-A INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1272-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN1272-S Single Base Substitution G-A INTRON HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1645-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN1645-S Single Base Substitution G-A INTRON HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN2207-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.500126;DP=4245;DP4=2060,1876,8,9;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0186101;MQB=0.372314;MQSB=0.836597;RPB=0.581998;SGB=71.8647;VDB=0.976775;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN2295.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN2295 SNP G -> A AC=2;AN=192;BQB=0.686017;DP=5090;DP4=2414,2345,31,22;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.0165029;MQB=0.00149954;MQSB=0.271834;RPB=0.980714;SGB=236.349;VDB=0.264296;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN2553-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN2553-S SNP G -> A AC=2;AN=198;BQB=0.995405;DP=4051;DP4=2005,1858,9,13;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0229573;MQB=0.0475454;MQSB=0.206253;RPB=0.117523;SGB=68.91;VDB=0.156762;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN3419-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN3419-S SNP G -> A AC=2;AN=184;BQB=0.946439;DP=4140;DP4=1840,2199,18,26;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.047343;MQB=0.00717986;MQSB=0.564867;RPB=0.979651;SGB=193.44;VDB=0.590488;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN4074-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.917418;DP=3396;DP4=1642,1687,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0426973;MQB=0.0184914;MQSB=2.57454e-06;RPB=0.998406;SGB=84.7091;VDB=0.327068;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN441-S.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 FN441-S Single Base Substitution G-A INTRON HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. W470-2-1.SNP.7:7828659 chr07:007828659 0 W/7828659-7828659 W470-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2378.SNP.7:7828771 chr07:007828771 0 W/7828771-7828771 FN2378 SNP C -> T AC=1;AN=192;BQB=0.734483;DP=4950;DP4=2236,2316,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0381818;MQB=0.882552;MQSB=5.62317e-10;RPB=0.880591;SGB=-6.8678;VDB=0.293155;EFF=INTRON(MODIFIER||||474|LOC_Os07g13634|protein_coding|CODING|LOC_Os07g13634.1|1|1) FN431-S.SNP.7:7833006 chr07:007833006 0 W/7833006-7833006 FN431-S Single Base Substitution T-C INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN2542-S.SNP.7:7834267 chr07:007834267 0 W/7834267-7834267 FN2542-S SNP T -> G,A AC=1,1;AN=198;BQB=0.419025;DP=4254;DP4=2160,1847,15,23;HOB=0.000204061;ICB=0.00041645;MQ=49;MQ0F=0;MQB=3.00795e-19;MQSB=0.748986;RPB=0.918288;SGB=-86.5184;VDB=0.31834;EFF=INTERGENIC(MODIFIER||||||||||1),INTERGENIC(MODIFIER||||||||||2) FN-344.SNP.7:7834990 chr07:007834990 0 W/7834990-7834990 FN-344 Single Base Substitution T-G INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN4230-S.SNP.7:7835277 chr07:007835277 0 W/7835277-7835277 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.854388;DP=2862;DP4=1319,1471,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.83515e-07;MQSB=0.00843511;RPB=0.166297;SGB=61.2001;VDB=0.23683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.7:7837106 chr07:007837106 0 W/7837106-7837106 FN1135-S Single Base Substitution C-T INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN-154.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN-154 Single Base Substitution C-T INTERGENIC HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN1069-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN1069-S Single Base Substitution C-T INTERGENIC HOMO SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1269-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN1269-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2083-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN2083-S SNP C -> T AC=2;AN=168;BQB=0.866248;DP=2995;DP4=1188,1755,17,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.6558e-18;MQSB=0.954377;RPB=0.929925;SGB=78.0935;VDB=0.673584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.810232;DP=4530;DP4=1931,2350,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1454e-17;MQSB=0.248717;RPB=0.956821;SGB=100.07;VDB=0.735892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN2417 SNP C -> T AC=2;AN=200;BQB=0.961048;DP=4624;DP4=2029,2379,16,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.80103e-19;MQSB=0.627908;RPB=0.995994;SGB=108.768;VDB=0.495861;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.911135;DP=4191;DP4=1930,2110,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.92532e-13;MQSB=0.849281;RPB=0.777121;SGB=12.5396;VDB=0.07183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN3433-S SNP C -> T AC=1;AN=184;BQB=0.901383;DP=2867;DP4=1577,1219,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.15145e-05;MQSB=0.996247;RPB=0.206668;SGB=26.1347;VDB=0.705301;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN4020-S SNP C -> T AC=2;AN=168;BQB=0.502035;DP=2578;DP4=1321,1146,15,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.22881e-14;MQSB=0.71552;RPB=0.971744;SGB=131.927;VDB=0.813413;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.7:7844806 chr07:007844806 0 W/7844806-7844806 FN884-S Single Base Substitution C-T INTERGENIC HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN846-S.SNP.7:7845546 chr07:007845546 0 W/7845546-7845546 FN846-S Single Base Substitution C-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN4177-S.SNP.7:7848212 chr07:007848212 0 W/7848212-7848212 FN4177-S SNP A -> T AC=1;AN=170;BQB=0.796748;DP=2187;DP4=1011,1126,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01398e-05;MQSB=0.952858;RPB=0.931845;SGB=34.5445;VDB=0.560035;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN-104 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-390.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN-390 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-78.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN-78 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1501-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN1501-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2459.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN2459 SNP G -> A AC=2;AN=200;BQB=0.870178;DP=4525;DP4=2084,2113,20,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27457e-20;MQSB=0.721733;RPB=0.867465;SGB=119.583;VDB=0.709249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V950I|1095|LOC_Os07g13680|protein_coding|CODING|LOC_Os07g13680.1|7|1) FN2578-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN2578-S SNP G -> A AC=2;AN=198;BQB=0.507317;DP=4090;DP4=1859,1953,12,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.87225e-13;MQSB=0.811973;RPB=0.971862;SGB=57.8907;VDB=0.929761;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V950I|1095|LOC_Os07g13680|protein_coding|CODING|LOC_Os07g13680.1|7|1) FN3372-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN3372-S SNP G -> A AC=1;AN=184;BQB=0.997938;DP=3229;DP4=1684,1447,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.5628e-08;MQSB=0.467716;RPB=0.357456;SGB=23.2751;VDB=0.127291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V950I|1095|LOC_Os07g13680|protein_coding|CODING|LOC_Os07g13680.1|7|1) FN4046-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN4046-S SNP G -> A AC=1;AN=168;BQB=0.821135;DP=2780;DP4=1442,1247,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.44716e-07;MQSB=0.696516;RPB=0.284585;SGB=19.7539;VDB=0.511945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V950I|1095|LOC_Os07g13680|protein_coding|CODING|LOC_Os07g13680.1|7|1) FN416-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN416-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN831-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN831-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN933-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN933-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN956-S.SNP.7:7853027 chr07:007853027 0 W/7853027-7853027 FN956-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3831-S.SNP.7:7859767 chr07:007859767 0 W/7859767-7859767 FN3831-S SNP T -> C AC=2;AN=190;BQB=0.0402463;DP=3108;DP4=1930,1075,20,12;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.164093;MQB=0.325791;MQSB=0;RPB=0.277175;SGB=103.624;VDB=0.207221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.7:7861992 chr07:007861992 0 W/7861992-7861992 FN1302-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2771-S.SNP.7:7871800 chr07:007871800 0 W/7871800-7871800 FN2771-S SNP T -> A AC=1;AN=198;BQB=0.816275;DP=3891;DP4=1765,1820,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10459e-06;MQSB=0.99113;RPB=0.798862;SGB=21.559;VDB=0.830975;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T261|1041|LOC_Os07g13710|protein_coding|CODING|LOC_Os07g13710.1|2|1) FN1379-S.SNP.7:7872830 chr07:007872830 0 W/7872830-7872830 FN1379-S Single Base Substitution C-A INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2404.SNP.7:7888845 chr07:007888845 0 W/7888845-7888845 FN2404 SNP T -> A AC=1;AN=200;BQB=0.793278;DP=4787;DP4=2210,2262,22,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000626697;MQB=6.62237e-20;MQSB=0.991437;RPB=0.466836;SGB=178.604;VDB=0.593213;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.7:7892430 chr07:007892430 0 W/7892430-7892430 FN-409 Single Base Substitution G-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1048-S.SNP.7:7898368 chr07:007898368 0 W/7898368-7898368 FN1048-S Single Base Substitution C-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN959-S.SNP.7:7898453 chr07:007898453 0 W/7898453-7898453 FN959-S Single Base Substitution A-C INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2708-S.SNP.7:7899148 chr07:007899148 0 W/7899148-7899148 FN2708-S SNP C -> T AC=2;AN=200;BQB=0.999924;DP=5150;DP4=2504,2366,20,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000582524;MQB=4.6123e-21;MQSB=0.909855;RPB=0.886949;SGB=54.4347;VDB=0.528244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.7:7904224 chr07:007904224 0 W/7904224-7904224 FN3956-S SNP C -> A AC=2;AN=168;BQB=0.981772;DP=2252;DP4=1005,1089,10,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.37033e-13;MQSB=0.56068;RPB=0.587341;SGB=114.204;VDB=0.206576;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A147|198|LOC_Os07g13780|protein_coding|CODING|LOC_Os07g13780.1|1|1) FN3536-S.SNP.7:7905853 chr07:007905853 0 W/7905853-7905853 FN3536-S SNP A -> G AC=1;AN=188;BQB=0.966698;DP=2566;DP4=1284,1162,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52092e-08;MQSB=0.991958;RPB=0.926944;SGB=53.5223;VDB=0.843506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F23S|121|LOC_Os07g13790|protein_coding|CODING|LOC_Os07g13790.1|1|1) FN319-S.SNP.7:7909280 chr07:007909280 0 W/7909280-7909280 FN319-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g13800 cytokinin-N-glucosyltransferase, putative, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. W464-2-1.SNP.7:7922121 chr07:007922121 0 W/7922121-7922121 W464-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN980-S.SNP.7:7934434 chr07:007934434 0 W/7934434-7934434 FN980-S Single Base Substitution C-T INTRON HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2729-S.SNP.7:7937477 chr07:007937477 0 W/7937477-7937477 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.150856;DP=4882;DP4=2538,2004,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.14926e-11;MQSB=0.994351;RPB=0.860135;SGB=-58.3105;VDB=0.119845;EFF=INTRON(MODIFIER||||910|LOC_Os07g13860|protein_coding|CODING|LOC_Os07g13860.1|1|1) FN2729-S.SNP.7:7937478 chr07:007937478 0 W/7937478-7937478 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.341873;DP=4878;DP4=2547,2059,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38743e-09;MQSB=0.956497;RPB=0.950095;SGB=40.2696;VDB=0.0362067;EFF=INTRON(MODIFIER||||910|LOC_Os07g13860|protein_coding|CODING|LOC_Os07g13860.1|1|1) FN2729-S.SNP.7:7938125 chr07:007938125 0 W/7938125-7938125 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.428457;DP=4682;DP4=2308,2204,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12267e-16;MQSB=0.958936;RPB=0.0445309;SGB=50.3263;VDB=0.166522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.7:7938126 chr07:007938126 0 W/7938126-7938126 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.661296;DP=4687;DP4=2276,2223,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89062e-15;MQSB=0.871373;RPB=0.307238;SGB=104.921;VDB=0.363428;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.7:7940234 chr07:007940234 0 W/7940234-7940234 FN-134 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g13870 OsFBX229 - F-box domain containing protein, expressed SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN-134.SNP.7:7940235 chr07:007940235 0 W/7940235-7940235 FN-134 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g13870 OsFBX229 - F-box domain containing protein, expressed SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN510-S.SNP.7:7958696 chr07:007958696 0 W/7958696-7958696 FN510-S Single Base Substitution T-C INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-240.SNP.7:7965991 chr07:007965991 0 W/7965991-7965991 FN-240 Single Base Substitution T-C INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN951-S.SNP.7:7975603 chr07:007975603 0 W/7975603-7975603 FN951-S Single Base Substitution T-C INTRON HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN696-S.SNP.7:7980723 chr07:007980723 0 W/7980723-7980723 FN696-S Single Base Substitution A-T INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-102.SNP.7:7995097 chr07:007995097 0 W/7995097-7995097 FN-102 Single Base Substitution T-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. W502-3-4.SNP.7:7999062 chr07:007999062 0 W/7999062-7999062 W502-3-4 Single Base Substitution G-A INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN672-S.SNP.7:8002786 chr07:008002786 0 W/8002786-8002786 FN672-S Single Base Substitution T-C INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN985-S.SNP.7:8003880 chr07:008003880 0 W/8003880-8003880 FN985-S Single Base Substitution G-A INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2469.SNP.7:8009601 chr07:008009601 0 W/8009601-8009601 FN2469 SNP T -> C AC=1;AN=200;BQB=0.174014;DP=4724;DP4=2248,1900,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000211685;MQB=5.61897e-10;MQSB=0.993326;RPB=0.693418;SGB=47.4799;VDB=0.656585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N86S|176|LOC_Os07g14030|protein_coding|CODING|LOC_Os07g14030.1|1|1) FN1650-S.SNP.7:8020454 chr07:008020454 0 W/8020454-8020454 FN1650-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os07g14060 retrotransposon protein, putative, unclassified, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1761-S.SNP.7:8020454 chr07:008020454 0 W/8020454-8020454 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.418812;DP=1705;DP4=723,949,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00821114;MQB=0.000261605;MQSB=0.000197297;RPB=0.642258;SGB=-17.1729;VDB=0.470998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S523L|748|LOC_Os07g14060|protein_coding|CODING|LOC_Os07g14060.1|4|1) FN2685-S.SNP.7:8021846 chr07:008021846 0 W/8021846-8021846 FN2685-S SNP C -> G AC=1;AN=200;BQB=0.804542;DP=4724;DP4=2227,2182,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.11345e-09;MQSB=0.864577;RPB=0.832662;SGB=32.0901;VDB=0.123095;EFF=INTRON(MODIFIER||||748|LOC_Os07g14060|protein_coding|CODING|LOC_Os07g14060.1|1|1) FN2268-S.SNP.7:8021996 chr07:008021996 0 W/8021996-8021996 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.238368;DP=4178;DP4=1907,1889,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03901e-09;MQSB=0.999615;RPB=0.648037;SGB=14.9883;VDB=0.86467;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G185R|748|LOC_Os07g14060|protein_coding|CODING|LOC_Os07g14060.1|1|1) FN1712-S.SNP.7:8022812 chr07:008022812 0 W/8022812-8022812 FN1712-S SNP A -> G AC=1;AN=188;BQB=0.127169;DP=2096;DP4=1234,824,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.0367e-07;MQSB=0.942358;RPB=0.387946;SGB=-12.2833;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.7:8023156 chr07:008023156 0 W/8023156-8023156 FN1750-S SNP C -> A AC=2;AN=188;BQB=0.748992;DP=2623;DP4=1490,1088,17,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.42657e-16;MQSB=0.976067;RPB=0.0770536;SGB=22.5144;VDB=0.824874;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.7:8024597 chr07:008024597 0 W/8024597-8024597 FN748-S Single Base Substitution A-T INTRON HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1583-S.SNP.7:8025460 chr07:008025460 0 W/8025460-8025460 FN1583-S Single Base Substitution C-A STOP_GAINED HET LOC_Os07g14070 SCP-like extracellular protein, expressed SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1037-S.SNP.7:8030499 chr07:008030499 0 W/8030499-8030499 FN1037-S Single Base Substitution T-C INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. W443-5-1-3.SNP.7:8031221 chr07:008031221 0 W/8031221-8031221 W443-5-1-3 Single Base Substitution G-A INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN1096-S.SNP.7:8031521 chr07:008031521 0 W/8031521-8031521 FN1096-S Single Base Substitution C-T INTERGENIC HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2426.SNP.7:8039264 chr07:008039264 0 W/8039264-8039264 FN2426 SNP T -> A AC=1;AN=200;BQB=0.940848;DP=5020;DP4=2375,2422,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50419e-08;MQSB=0.990484;RPB=0.939496;SGB=63.4749;VDB=0.444911;EFF=INTRON(MODIFIER||||403|LOC_Os07g14090|protein_coding|CODING|LOC_Os07g14090.1|2|1) FN4150-S.SNP.7:8046310 chr07:008046310 0 W/8046310-8046310 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.98447;DP=2245;DP4=1027,1144,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.6977e-11;MQSB=0.40572;RPB=0.987854;SGB=52.0913;VDB=0.116657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.7:8046312 chr07:008046312 0 W/8046312-8046312 FN4150-S SNP G -> T AC=1;AN=170;BQB=0.947409;DP=2257;DP4=1054,1146,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.7363e-11;MQSB=0.354398;RPB=0.654739;SGB=74.528;VDB=0.126405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.7:8047306 chr07:008047306 0 W/8047306-8047306 FN2408 SNP C -> T AC=1;AN=200;BQB=0.835897;DP=4455;DP4=1903,2246,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.33988e-12;MQSB=0.990369;RPB=0.932969;SGB=39.9056;VDB=0.776195;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.7:8047538 chr07:008047538 0 W/8047538-8047538 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3365-S.SNP.7:8050968 chr07:008050968 0 W/8050968-8050968 FN3365-S SNP T -> C AC=1;AN=184;BQB=0.427983;DP=2926;DP4=1477,1373,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.40377e-06;MQSB=0.959016;RPB=0.926204;SGB=32.2261;VDB=0.731645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.7:8056615 chr07:008056615 0 W/8056615-8056615 FN1357-S Single Base Substitution T-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2138-S.SNP.7:8060894 chr07:008060894 0 W/8060894-8060894 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.875948;DP=1887;DP4=587,1239,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.46093e-10;MQSB=0.981095;RPB=0.555383;SGB=29.4772;VDB=0.617477;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.7:8067949 chr07:008067949 0 W/8067949-8067949 FN1221-S Single Base Substitution A-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2740-S.SNP.7:8070534 chr07:008070534 0 W/8070534-8070534 FN2740-S SNP G -> A AC=1;AN=200;BQB=0.792793;DP=4823;DP4=2404,2217,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25736e-12;MQSB=0.989857;RPB=0.964734;SGB=81.8956;VDB=0.673257;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.7:8070857 chr07:008070857 0 W/8070857-8070857 FN2201-S SNP G -> A AC=1;AN=190;BQB=0.621896;DP=4561;DP4=2192,2132,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021925;MQB=2.0539e-07;MQSB=0.996209;RPB=0.863873;SGB=39.6545;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.7:8074851 chr07:008074851 0 W/8074851-8074851 FN2426 SNP C -> T AC=1;AN=200;BQB=0.727412;DP=4176;DP4=2219,1639,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000239464;MQB=2.87076e-09;MQSB=0.000154356;RPB=0.995012;SGB=26.8797;VDB=0.260032;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.7:8075024 chr07:008075024 0 W/8075024-8075024 FN2177-S SNP A -> T AC=1;AN=168;BQB=0.000116935;DP=2633;DP4=1491,1071,17,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.80437e-05;MQSB=0.993671;RPB=0.959191;SGB=-154.912;VDB=0.480074;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.7:8079243 chr07:008079243 0 W/8079243-8079243 FN1007-S Single Base Substitution T-A STOP_GAINED HET LOC_Os07g14160 polygalacturonase, putative, expressed SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2560-S.SNP.7:8083958 chr07:008083958 0 W/8083958-8083958 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.836246;DP=4102;DP4=2243,1506,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.54295e-07;MQSB=0.0268713;RPB=0.669191;SGB=54.144;VDB=0.332906;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.7:8089703 chr07:008089703 0 W/8089703-8089703 FN4104-S SNP C -> T AC=1;AN=182;BQB=0.952363;DP=3111;DP4=1582,1462,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00225008;MQB=0.00299161;MQSB=0.000262264;RPB=0.485892;SGB=35.0899;VDB=0.198714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.7:8091973 chr07:008091973 0 W/8091973-8091973 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.992802;DP=2856;DP4=1450,1285,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00665266;MQB=2.82653e-09;MQSB=0.167006;RPB=0.874973;SGB=94.6341;VDB=0.00907131;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.7:8096111 chr07:008096111 0 W/8096111-8096111 FN4161-S SNP G -> A AC=1;AN=170;BQB=0.980096;DP=2535;DP4=1306,1166,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00788955;MQB=0.00131871;MQSB=0.731779;RPB=0.999969;SGB=47.8722;VDB=0.969087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.7:8097871 chr07:008097871 0 W/8097871-8097871 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN-262.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN-262 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g14210 retrotransposon protein, putative, unclassified SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-341.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN-341 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g14210 retrotransposon protein, putative, unclassified SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1668-S.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN1668-S SNP C -> T AC=2;AN=188;BQB=0.948676;DP=2614;DP4=1410,1141,25,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.30567e-17;MQSB=0.736094;RPB=0.779175;SGB=42.5773;VDB=0.45693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P343L|728|LOC_Os07g14210|protein_coding|CODING|LOC_Os07g14210.1|1|1) FN2607-S.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN2607-S SNP C -> T AC=2;AN=198;BQB=0.830412;DP=4081;DP4=2020,1780,9,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00122519;MQB=3.76864e-11;MQSB=0.504018;RPB=0.0371895;SGB=90.9049;VDB=0.242016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P343L|728|LOC_Os07g14210|protein_coding|CODING|LOC_Os07g14210.1|1|1) FN3455-S.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN3455-S SNP C -> T AC=2;AN=184;BQB=0.969424;DP=2891;DP4=1520,1276,16,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.303e-13;MQSB=0.751515;RPB=0.48032;SGB=92.0965;VDB=0.785144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P343L|728|LOC_Os07g14210|protein_coding|CODING|LOC_Os07g14210.1|1|1) FN702-S.SNP.7:8099578 chr07:008099578 0 W/8099578-8099578 FN702-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g14210 retrotransposon protein, putative, unclassified SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1464-S.SNP.7:8100366 chr07:008100366 0 W/8100366-8100366 FN1464-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g14210 retrotransposon protein, putative, unclassified SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2300.SNP.7:8100571 chr07:008100571 0 W/8100571-8100571 FN2300 SNP G -> A AC=1;AN=192;BQB=0.745405;DP=4901;DP4=2398,2147,11,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00040808;MQB=2.11801e-08;MQSB=0.264023;RPB=0.558065;SGB=21.2209;VDB=0.319185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G570E|728|LOC_Os07g14210|protein_coding|CODING|LOC_Os07g14210.1|3|1) FN1492-S.SNP.7:8108881 chr07:008108881 0 W/8108881-8108881 FN1492-S Single Base Substitution T-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1118-S.SNP.7:8109862 chr07:008109862 0 W/8109862-8109862 FN1118-S Single Base Substitution C-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN835-S.SNP.7:8112368 chr07:008112368 0 W/8112368-8112368 FN835-S Single Base Substitution G-C INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN4073-S.SNP.7:8113369 chr07:008113369 0 W/8113369-8113369 FN4073-S SNP C -> T AC=1;AN=182;BQB=0.917581;DP=2415;DP4=1382,925,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000414079;MQB=7.84473e-07;MQSB=0.720411;RPB=0.011231;SGB=44.1115;VDB=0.168722;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.7:8113450 chr07:008113450 0 W/8113450-8113450 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.597816;DP=1432;DP4=892,467,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000613006;MQSB=0.993439;RPB=0.391653;SGB=39.8925;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.7:8117095 chr07:008117095 0 W/8117095-8117095 FN1075-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3446-S.SNP.7:8117537 chr07:008117537 0 W/8117537-8117537 FN3446-S SNP G -> T AC=1;AN=184;BQB=0.667628;DP=3825;DP4=1734,1997,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.90347e-08;MQSB=0.2131;RPB=0.963672;SGB=49.835;VDB=0.765862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V198L|1339|LOC_Os07g14250|protein_coding|CODING|LOC_Os07g14250.1|1|1) FN1522-S.SNP.7:8121674 chr07:008121674 0 W/8121674-8121674 FN1522-S Single Base Substitution G-C INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN-349.SNP.7:8134420 chr07:008134420 0 W/8134420-8134420 FN-349 Single Base Substitution C-T INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1058-S.SNP.7:8135698 chr07:008135698 0 W/8135698-8135698 FN1058-S Single Base Substitution C-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2660-S.SNP.7:8139444 chr07:008139444 0 W/8139444-8139444 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.615146;DP=5091;DP4=2456,2376,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.53083e-06;MQSB=0.661974;RPB=0.892256;SGB=3.06925;VDB=0.443029;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G270|440|LOC_Os07g14270|protein_coding|CODING|LOC_Os07g14270.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G270|429|LOC_Os07g14270|protein_coding|CODING|LOC_Os07g14270.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G270|424|LOC_Os07g14270|protein_coding|CODING|LOC_Os07g14270.3|7|1) FN2708-S.SNP.7:8142501 chr07:008142501 0 W/8142501-8142501 FN2708-S SNP G -> T AC=1;AN=200;BQB=0.947523;DP=4546;DP4=2217,2085,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.09296e-12;MQSB=0.988253;RPB=0.221262;SGB=61.9006;VDB=0.155969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.7:8149815 chr07:008149815 0 W/8149815-8149815 FN2350 SNP A -> T AC=1;AN=192;BQB=0.998106;DP=4571;DP4=2071,2140,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.80625e-09;MQSB=0.999999;RPB=0.841335;SGB=46.9087;VDB=0.840515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L145H|543|LOC_Os07g14290|protein_coding|CODING|LOC_Os07g14290.1|2|1) FN1234-S.SNP.7:8154077 chr07:008154077 0 W/8154077-8154077 FN1234-S Single Base Substitution G-T INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN-228.SNP.7:8154681 chr07:008154681 0 W/8154681-8154681 FN-228 Single Base Substitution C-A INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN-82.SNP.7:8163874 chr07:008163874 0 W/8163874-8163874 FN-82 Single Base Substitution T-A INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN-82.SNP.7:8163875 chr07:008163875 0 W/8163875-8163875 FN-82 Single Base Substitution C-A INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2125-S.SNP.7:8169146 chr07:008169146 0 W/8169146-8169146 FN2125-S SNP T -> C AC=2;AN=168;BQB=0.981901;DP=3502;DP4=1838,1586,17,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.988e-16;MQSB=0.723441;RPB=0.635529;SGB=31.3762;VDB=0.0542905;EFF=INTERGENIC(MODIFIER||||||||||1) FN-138.SNP.7:8169153 chr07:008169153 0 W/8169153-8169153 FN-138 Single Base Substitution T-C INTERGENIC HOMO SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. W7-1-1.SNP.7:8172686 chr07:008172686 0 W/8172686-8172686 W7-1-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1916.SNP.7:8178475 chr07:008178475 0 W/8178475-8178475 FN1916 Single Base Substitution G-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN3561-S.SNP.7:8182843 chr07:008182843 0 W/8182843-8182843 FN3561-S SNP A -> T AC=2;AN=188;BQB=0.736814;DP=2877;DP4=1668,1085,24,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.33272e-20;MQSB=0.975883;RPB=0.996992;SGB=128.11;VDB=0.114657;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.7:8184155 chr07:008184155 0 W/8184155-8184155 FN-273 Single Base Substitution C-T INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3716-S.SNP.7:8196449 chr07:008196449 0 W/8196449-8196449 FN3716-S SNP A -> T AC=1;AN=190;BQB=0.759669;DP=3010;DP4=1772,1110,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.09379e-08;MQSB=0.995404;RPB=0.815062;SGB=1.00337;VDB=0.795392;EFF=INTRON(MODIFIER||||357|LOC_Os07g14350|protein_coding|CODING|LOC_Os07g14350.1|3|1),INTRON(MODIFIER||||346|LOC_Os07g14350|protein_coding|CODING|LOC_Os07g14350.2|3|1) FN4130-S.SNP.7:8197355 chr07:008197355 0 W/8197355-8197355 FN4130-S SNP G -> T AC=2;AN=182;BQB=0.902325;DP=2982;DP4=1517,1345,10,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.2775e-13;MQSB=0.890286;RPB=0.643618;SGB=93.7308;VDB=0.845517;EFF=INTRON(MODIFIER||||357|LOC_Os07g14350|protein_coding|CODING|LOC_Os07g14350.1|4|1),INTRON(MODIFIER||||346|LOC_Os07g14350|protein_coding|CODING|LOC_Os07g14350.2|4|1) FN-240.SNP.7:8200613 chr07:008200613 0 W/8200613-8200613 FN-240 Single Base Substitution C-T INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1217-S.SNP.7:8201247 chr07:008201247 0 W/8201247-8201247 FN1217-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3753-S.SNP.7:8209721 chr07:008209721 0 W/8209721-8209721 FN3753-S SNP C -> G AC=1;AN=190;BQB=0.996716;DP=3912;DP4=1856,1899,15,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.44683e-11;MQSB=4.46142e-10;RPB=0.99629;SGB=140.173;VDB=0.684839;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.7:8210151 chr07:008210151 0 W/8210151-8210151 FN520-S Single Base Substitution C-A INTERGENIC HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3807-S.SNP.7:8211815 chr07:008211815 0 W/8211815-8211815 FN3807-S SNP A -> T AC=1;AN=190;BQB=0.848256;DP=3338;DP4=1676,1565,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89704e-07;MQSB=0.962668;RPB=0.973866;SGB=18.552;VDB=0.649234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T370S|785|LOC_Os07g14390|protein_coding|CODING|LOC_Os07g14390.1|3|1) FN2339.SNP.7:8222825 chr07:008222825 0 W/8222825-8222825 FN2339 SNP C -> T AC=1;AN=192;BQB=0.752539;DP=4840;DP4=2273,2335,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.0826446;MQB=0.468031;MQSB=0;RPB=0.468492;SGB=-11.3826;VDB=0.01754;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.7:8226557 chr07:008226557 0 W/8226557-8226557 FN775-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN1318-S.SNP.7:8231841 chr07:008231841 0 W/8231841-8231841 FN1318-S Single Base Substitution A-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2682-S.SNP.7:8233552 chr07:008233552 0 W/8233552-8233552 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.982118;DP=3206;DP4=1890,1095,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11359e-06;MQSB=0.496433;RPB=0.957003;SGB=13.8539;VDB=0.754408;EFF=INTERGENIC(MODIFIER||||||||||1) FN_776-5-1.SNP.7:8238671 chr07:008238671 0 W/8238671-8238671 FN_776-5-1 Single Base Substitution C-T HET LOC_Os07g14430 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN3628-S.SNP.7:8242696 chr07:008242696 0 W/8242696-8242696 FN3628-S SNP A -> T AC=2;AN=190;BQB=0.955137;DP=2858;DP4=1307,1418,12,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000349895;MQB=6.29906e-10;MQSB=0.210689;RPB=0.0675796;SGB=85.5263;VDB=0.0711928;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.7:8244781 chr07:008244781 0 W/8244781-8244781 FN3911-S SNP T -> C AC=1;AN=158;BQB=0.970108;DP=2433;DP4=1261,1099,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0378134;MQB=0.32728;MQSB=0.000246273;RPB=0.480055;SGB=55.806;VDB=0.296559;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.7:8253284 chr07:008253284 0 W/8253284-8253284 FN3447-S SNP T -> C AC=1;AN=184;BQB=0.272705;DP=1928;DP4=1061,767,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00207469;MQB=0.159074;MQSB=1.47856e-07;RPB=0.89224;SGB=30.6558;VDB=0.325119;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.7:8255422 chr07:008255422 0 W/8255422-8255422 FN908-S Single Base Substitution T-C INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN863-S.SNP.7:8255683 chr07:008255683 0 W/8255683-8255683 FN863-S Single Base Substitution C-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN863-S.SNP.7:8255684 chr07:008255684 0 W/8255684-8255684 FN863-S Single Base Substitution G-T INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN474-S.SNP.7:8268647 chr07:008268647 0 W/8268647-8268647 FN474-S Single Base Substitution G-A INTRON HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN-203.SNP.7:8294795 chr07:008294795 0 W/8294795-8294795 FN-203 Single Base Substitution G-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN2421.SNP.7:8294843 chr07:008294843 0 W/8294843-8294843 FN2421 SNP G -> A AC=1;AN=200;BQB=0.921178;DP=4108;DP4=1751,2089,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46806e-06;MQSB=0.989399;RPB=0.723889;SGB=11.2488;VDB=0.343674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2328.SNP.7:8297674 chr07:008297674 0 W/8297674-8297674 FN2328 SNP C -> T AC=1;AN=192;BQB=0.947129;DP=4823;DP4=2443,2063,18,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.96943e-21;MQSB=0.0326915;RPB=0.845074;SGB=118.196;VDB=0.559255;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.7:8299166 chr07:008299166 0 W/8299166-8299166 FN1152-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN-171.SNP.7:8304360 chr07:008304360 0 W/8304360-8304360 FN-171 Single Base Substitution C-A INTRON HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2080-S.SNP.7:8306434 chr07:008306434 0 W/8306434-8306434 FN2080-S SNP C -> G AC=1;AN=168;BQB=0.223334;DP=2924;DP4=1683,1207,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74714e-07;MQSB=0.963538;RPB=0.745642;SGB=-40.0741;VDB=0.605821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q610E|889|LOC_Os07g14560|protein_coding|CODING|LOC_Os07g14560.1|3|1) FN3316-S.SNP.7:8307285 chr07:008307285 0 W/8307285-8307285 FN3316-S SNP C -> A AC=1;AN=184;BQB=0.964062;DP=3082;DP4=1597,1397,2,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.31779e-05;MQSB=0.846742;RPB=1;SGB=26.1347;VDB=0.86488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P862H|889|LOC_Os07g14560|protein_coding|CODING|LOC_Os07g14560.1|4|1) FN2098-S.SNP.7:8318051 chr07:008318051 0 W/8318051-8318051 FN2098-S SNP G -> T AC=1;AN=168;BQB=0.292339;DP=4592;DP4=2293,2241,15,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.31176e-13;MQSB=0.993842;RPB=0.889301;SGB=-209.742;VDB=0.319074;EFF=INTRON(MODIFIER||||382|LOC_Os07g14580|protein_coding|CODING|LOC_Os07g14580.1|3|1) FN2098-S.SNP.7:8318065 chr07:008318065 0 W/8318065-8318065 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.615614;DP=4623;DP4=2205,2370,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.37279e-16;MQSB=0.996877;RPB=0.520757;SGB=-86.8983;VDB=0.0332459;EFF=INTRON(MODIFIER||||382|LOC_Os07g14580|protein_coding|CODING|LOC_Os07g14580.1|3|1) FN3413-S.SNP.7:8319229 chr07:008319229 0 W/8319229-8319229 FN3413-S SNP A -> G AC=1;AN=184;BQB=0.909913;DP=2391;DP4=1338,996,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01307e-07;MQSB=0.994641;RPB=0.53401;SGB=44.2207;VDB=0.417004;EFF=INTRON(MODIFIER||||382|LOC_Os07g14580|protein_coding|CODING|LOC_Os07g14580.1|4|1) FN713-S.SNP.7:8326870 chr07:008326870 0 W/8326870-8326870 FN713-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g14600 hydrolase, putative, expressed SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3853-S.SNP.7:8329575 chr07:008329575 0 W/8329575-8329575 FN3853-S SNP G -> A AC=2;AN=158;BQB=0.997768;DP=2057;DP4=990,967,8,10;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00145843;MQB=4.1445e-08;MQSB=2.62119e-13;RPB=0.997349;SGB=73.2838;VDB=0.693103;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.7:8329575 chr07:008329575 0 W/8329575-8329575 FN887-S Single Base Substitution G-A INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN_777-2-1.SNP.7:8332200 chr07:008332200 0 W/8332200-8332200 FN_777-2-1 Single Base Substitution G-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2711-S.SNP.7:8333269 chr07:008333269 0 W/8333269-8333269 FN2711-S SNP G -> C AC=1;AN=200;BQB=0.631178;DP=4473;DP4=2047,2209,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95578e-10;MQSB=0.973025;RPB=0.991098;SGB=47.4799;VDB=0.138479;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.7:8333281 chr07:008333281 0 W/8333281-8333281 FN3992-S SNP G -> A AC=2;AN=168;BQB=0.799212;DP=2732;DP4=1276,1312,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.90923e-11;MQSB=0.893284;RPB=0.352416;SGB=46.4929;VDB=0.568447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.7:8338341 chr07:008338341 0 W/8338341-8338341 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.948318;DP=2423;DP4=1011,1321,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.89306e-05;MQSB=0.791355;RPB=0.996357;SGB=18.1394;VDB=0.237012;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.7:8339803 chr07:008339803 0 W/8339803-8339803 FN752-S Single Base Substitution C-T INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1268-S.SNP.7:8347720 chr07:008347720 0 W/8347720-8347720 FN1268-S Single Base Substitution C-A STOP_LOST HET LOC_Os07g14630 glucosyltransferase-11, putative, expressed SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1472-S.SNP.7:8364551 chr07:008364551 0 W/8364551-8364551 FN1472-S Single Base Substitution C-G INTRON HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN4108-S.SNP.7:8369214 chr07:008369214 0 W/8369214-8369214 FN4108-S SNP T -> A AC=2;AN=182;BQB=0.870982;DP=2878;DP4=1479,1315,10,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.45419e-12;MQSB=0.839671;RPB=0.836966;SGB=80.1982;VDB=0.809093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.7:8370025 chr07:008370025 0 W/8370025-8370025 FN3650-S SNP T -> C AC=2;AN=190;BQB=0.722496;DP=2665;DP4=1271,1290,26,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.50938e-24;MQSB=0.752267;RPB=0.99999;SGB=176.604;VDB=0.426789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.7:8370326 chr07:008370326 0 W/8370326-8370326 FN1096-S Single Base Substitution G-T INTERGENIC HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3521-S.SNP.7:8372625 chr07:008372625 0 W/8372625-8372625 FN3521-S SNP T -> C AC=2;AN=188;BQB=0.997997;DP=2490;DP4=1106,1269,6,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.03883e-12;MQSB=0.884774;RPB=0.977399;SGB=85.3253;VDB=0.421693;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.7:8372990 chr07:008372990 0 W/8372990-8372990 FN890-S Single Base Substitution A-G INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN3852-S.SNP.7:8379516 chr07:008379516 0 W/8379516-8379516 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.861455;DP=2542;DP4=1222,1270,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000158837;MQSB=0.98099;RPB=0.699157;SGB=20.5959;VDB=0.0617301;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.7:8384447 chr07:008384447 0 W/8384447-8384447 FN_807-3-1 Single Base Substitution C-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1287-S.SNP.7:8385420 chr07:008385420 0 W/8385420-8385420 FN1287-S Single Base Substitution C-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3504-S.SNP.7:8387901 chr07:008387901 0 W/8387901-8387901 FN3504-S SNP G -> T AC=1;AN=188;BQB=0.698079;DP=2700;DP4=1340,1298,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.32047e-05;MQSB=0.999402;RPB=0.998733;SGB=25.3545;VDB=0.656326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.7:8391781 chr07:008391781 0 W/8391781-8391781 FN2462 SNP A -> G AC=1;AN=200;BQB=0.469037;DP=4586;DP4=1896,2323,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.94301e-07;MQSB=0.964834;RPB=0.971893;SGB=33.0593;VDB=0.0748766;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D13G|354|LOC_Os07g14710|protein_coding|CODING|LOC_Os07g14710.1|1|1) FN861-S.SNP.7:8393073 chr07:008393073 0 W/8393073-8393073 FN861-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g14710 transposon protein, putative, Mariner sub-class, expressed SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN3455-S.SNP.7:8395184 chr07:008395184 0 W/8395184-8395184 FN3455-S SNP G -> T AC=1;AN=184;BQB=0.989911;DP=2419;DP4=1086,1218,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.8878e-10;MQSB=0.905771;RPB=0.604374;SGB=53.3568;VDB=0.88158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.7:8397041 chr07:008397041 0 W/8397041-8397041 FN2496 SNP T -> C AC=1;AN=200;BQB=0.982862;DP=5016;DP4=2437,2286,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09688e-08;MQSB=0.984466;RPB=0.898399;SGB=43.8747;VDB=0.816058;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN-215 Single Base Substitution C-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1326-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN1326-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1508-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN1508-S Single Base Substitution C-T INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2474.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN2474 SNP C -> T AC=1;AN=200;BQB=0.367094;DP=3510;DP4=1789,1406,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24897e-10;MQSB=0.614825;RPB=0.0866915;SGB=42.5108;VDB=0.486238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.754093;DP=3295;DP4=1652,1420,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.97085e-08;MQSB=0.83618;RPB=0.49604;SGB=31.9395;VDB=0.722593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.997071;DP=2193;DP4=1050,1064,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79685e-09;MQSB=0.911538;RPB=0.722131;SGB=39.2697;VDB=0.456741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN3840-S SNP C -> T AC=2;AN=190;BQB=0.894502;DP=2054;DP4=907,1059,12,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.6805e-16;MQSB=0.926618;RPB=0.471425;SGB=121.957;VDB=0.938092;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.970732;DP=2048;DP4=948,1004,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18308e-12;MQSB=0.960625;RPB=0.91113;SGB=92.0501;VDB=0.410894;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN434-S Single Base Substitution C-T INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN724-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN724-S Single Base Substitution C-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN775-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN775-S Single Base Substitution C-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN873-S.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. W706-3-1.SNP.7:8404042 chr07:008404042 0 W/8404042-8404042 W706-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN1261-S.SNP.7:8406867 chr07:008406867 0 W/8406867-8406867 FN1261-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3793-S.SNP.7:8419827 chr07:008419827 0 W/8419827-8419827 FN3793-S SNP G -> C AC=1;AN=190;BQB=0.673735;DP=2979;DP4=1329,1524,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.51571e-07;MQSB=0.973108;RPB=0.996716;SGB=67.3108;VDB=0.365321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.7:8420291 chr07:008420291 0 W/8420291-8420291 FN1348-S Single Base Substitution G-A INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-263.SNP.7:8420659 chr07:008420659 0 W/8420659-8420659 FN-263 Single Base Substitution A-C INTERGENIC HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN2629-S.SNP.7:8425135 chr07:008425135 0 W/8425135-8425135 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.666036;DP=4544;DP4=2136,2193,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34402e-09;MQSB=0.908149;RPB=0.93236;SGB=68.0801;VDB=0.971303;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.7:8425294 chr07:008425294 0 W/8425294-8425294 FN4125-S SNP G -> A AC=2;AN=182;BQB=0.948058;DP=2896;DP4=1420,1400,13,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.02539e-12;MQSB=0.86844;RPB=0.763261;SGB=84.7091;VDB=0.665601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.7:8425295 chr07:008425295 0 W/8425295-8425295 FN4125-S SNP G -> A AC=2;AN=182;BQB=0.998936;DP=2878;DP4=1408,1396,13,5;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.18694e-10;MQSB=0.864681;RPB=0.309549;SGB=75.6874;VDB=0.404547;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.7:8427929 chr07:008427929 0 W/8427929-8427929 FN892-S Single Base Substitution C-T INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2538-S.SNP.7:8429131 chr07:008429131 0 W/8429131-8429131 FN2538-S SNP G -> T AC=1;AN=198;BQB=0.975261;DP=4299;DP4=1802,2164,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232612;MQB=2.06587e-07;MQSB=0.908945;RPB=0.904472;SGB=43.7442;VDB=0.961623;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.7:8429435 chr07:008429435 0 W/8429435-8429435 FN-174 Single Base Substitution C-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3883-S.SNP.7:8430193 chr07:008430193 0 W/8430193-8430193 FN3883-S SNP A -> G AC=1;AN=158;BQB=0.727755;DP=1855;DP4=781,943,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=4.6261e-05;MQSB=0.986637;RPB=0.50631;SGB=37.4429;VDB=0.053332;EFF=INTRON(MODIFIER||||254|LOC_Os07g14760|protein_coding|CODING|LOC_Os07g14760.1|1|1) FN-407.SNP.7:8431412 chr07:008431412 0 W/8431412-8431412 FN-407 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g14760 expressed protein SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.7:8431412 chr07:008431412 0 W/8431412-8431412 FN407-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g14760 expressed protein SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2707-S.SNP.7:8432360 chr07:008432360 0 W/8432360-8432360 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.0620402;DP=4601;DP4=2142,2210,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14735e-07;MQSB=0.934765;RPB=0.819066;SGB=36.6644;VDB=0.489152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN-172 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1264-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN1264-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN1320-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN1355-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1415-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN1415-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1514-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN1514-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2125-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN2125-S SNP G -> T AC=2;AN=168;BQB=0.588747;DP=2656;DP4=1302,1253,10,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.71509e-17;MQSB=0.487003;RPB=0.760888;SGB=-8.04863;VDB=0.190948;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R21|67|LOC_Os07g14770|protein_coding|CODING|LOC_Os07g14770.1|1|1) FN3375-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN3375-S SNP G -> T AC=2;AN=184;BQB=0.889567;DP=3038;DP4=1670,1254,14,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.14269e-16;MQSB=0.48193;RPB=0.0361784;SGB=63.6237;VDB=0.568525;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R21|67|LOC_Os07g14770|protein_coding|CODING|LOC_Os07g14770.1|1|1) FN3853-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN3853-S SNP G -> T AC=2;AN=158;BQB=0.949784;DP=2665;DP4=1370,1175,16,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.56583e-10;MQSB=0.245335;RPB=0.236531;SGB=99.5005;VDB=0.0772069;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R21|67|LOC_Os07g14770|protein_coding|CODING|LOC_Os07g14770.1|1|1) FN4009-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN4009-S SNP G -> T AC=2;AN=168;BQB=0.92446;DP=2720;DP4=1364,1230,16,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.66677e-13;MQSB=0.184601;RPB=0.487537;SGB=123.066;VDB=0.70633;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R21|67|LOC_Os07g14770|protein_coding|CODING|LOC_Os07g14770.1|1|1) FN4181-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN4181-S SNP G -> T AC=1;AN=170;BQB=0.887225;DP=2698;DP4=1355,1255,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.66661e-08;MQSB=0.205736;RPB=0.957993;SGB=52.3148;VDB=0.0587143;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R21|67|LOC_Os07g14770|protein_coding|CODING|LOC_Os07g14770.1|1|1) FN508-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN508-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN748-S.SNP.7:8437178 chr07:008437178 0 W/8437178-8437178 FN748-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1045-S.SNP.7:8437630 chr07:008437630 0 W/8437630-8437630 FN1045-S Single Base Substitution T-C INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1483-S.SNP.7:8437630 chr07:008437630 0 W/8437630-8437630 FN1483-S Single Base Substitution T-C INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN4241-S.SNP.7:8437630 chr07:008437630 0 W/8437630-8437630 FN4241-S SNP T -> C AC=2;AN=170;BQB=0.80094;DP=2459;DP4=1191,1180,18,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.94642e-20;MQSB=0.970695;RPB=0.318847;SGB=114.059;VDB=0.925833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.7:8438329 chr07:008438329 0 W/8438329-8438329 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.976148;DP=2448;DP4=1267,1104,5,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.26522e-07;MQSB=0.653568;RPB=0.949269;SGB=57.786;VDB=0.410041;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.7:8444227 chr07:008444227 0 W/8444227-8444227 FN3899-S SNP G -> T AC=1;AN=158;BQB=0.999382;DP=2822;DP4=1178,1537,12,5;HOB=8.01154e-05;ICB=0.000161245;MQ=23;MQ0F=0.267541;MQB=0.049908;MQSB=0;RPB=0.268535;SGB=68.9144;VDB=0.70978;EFF=INTRON(MODIFIER||||566|LOC_Os07g14790|protein_coding|CODING|LOC_Os07g14790.1|2|1) FN3918-S.SNP.7:8446954 chr07:008446954 0 W/8446954-8446954 FN3918-S SNP A -> T AC=1;AN=158;BQB=0.9182;DP=2660;DP4=1291,1245,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00037594;MQB=1.06134e-06;MQSB=0.846514;RPB=0.304871;SGB=55.806;VDB=0.154006;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.7:8448530 chr07:008448530 0 W/8448530-8448530 FN1448-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g14800 retrotransposon protein, putative, unclassified, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1216-S.SNP.7:8449315 chr07:008449315 0 W/8449315-8449315 FN1216-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g14800 retrotransposon protein, putative, unclassified, expressed SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN3462-S.SNP.7:8449562 chr07:008449562 0 W/8449562-8449562 FN3462-S SNP C -> T AC=1;AN=184;BQB=0.458795;DP=4635;DP4=2226,2303,14,15;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.031931;MQB=0.000114471;MQSB=8.43701e-07;RPB=0.24998;SGB=-276.583;VDB=0.295535;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1075|1705|LOC_Os07g14800|protein_coding|CODING|LOC_Os07g14800.1|4|1) FN2276-S.SNP.7:8466360 chr07:008466360 0 W/8466360-8466360 FN2276-S SNP C -> T AC=1;AN=190;BQB=0.884462;DP=4784;DP4=2176,2319,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00281e-15;MQSB=0.849545;RPB=0.999903;SGB=21.2038;VDB=0.643612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.7:8472906 chr07:008472906 0 W/8472906-8472906 FN2440 SNP T -> G AC=2;AN=200;BQB=0.325949;DP=4672;DP4=2273,2001,28,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.98783e-34;MQSB=0.891964;RPB=0.506333;SGB=256.892;VDB=0.761144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.7:8472918 chr07:008472918 0 W/8472918-8472918 FN3750-S SNP A -> G AC=1;AN=190;BQB=0.578395;DP=2880;DP4=1411,1364,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.12884e-18;MQSB=0.932211;RPB=0.341533;SGB=126.511;VDB=0.564234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.7:8473107 chr07:008473107 0 W/8473107-8473107 FN3568-S SNP A -> G AC=1;AN=188;BQB=0.957285;DP=2749;DP4=1200,1468,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.9793e-06;MQSB=0.796993;RPB=0.921587;SGB=35.3493;VDB=0.270411;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.7:8475091 chr07:008475091 0 W/8475091-8475091 FN673-S Single Base Substitution A-G INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1751-S.SNP.7:8476329 chr07:008476329 0 W/8476329-8476329 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.00225157;DP=2620;DP4=1073,1500,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.20783e-06;MQSB=0.902177;RPB=0.649604;SGB=-187.338;VDB=0.457078;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.7:8476685 chr07:008476685 0 W/8476685-8476685 FN-309 Single Base Substitution C-A INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1251-S.SNP.7:8486201 chr07:008486201 0 W/8486201-8486201 FN1251-S Single Base Substitution G-A INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-184.SNP.7:8486855 chr07:008486855 0 W/8486855-8486855 FN-184 Single Base Substitution A-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN601-S.SNP.7:8495693 chr07:008495693 0 W/8495693-8495693 FN601-S Single Base Substitution T-C INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2542-S.SNP.7:8498340 chr07:008498340 0 W/8498340-8498340 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.99616;DP=4360;DP4=2222,1941,8,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02745e-13;MQSB=0.965851;RPB=0.717832;SGB=72.5051;VDB=0.718247;EFF=INTRON(MODIFIER||||1092|LOC_Os07g14850|protein_coding|CODING|LOC_Os07g14850.1|5|1) FN1369-S.SNP.7:8503965 chr07:008503965 0 W/8503965-8503965 FN1369-S Single Base Substitution T-A INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN1684-S.SNP.7:8507019 chr07:008507019 0 W/8507019-8507019 FN1684-S SNP C -> T AC=2;AN=188;BQB=0.900469;DP=3160;DP4=1636,1463,18,18;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.00949367;MQB=0.0554638;MQSB=0;RPB=0.190652;SGB=-125.748;VDB=0.293802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.7:8508081 chr07:008508081 0 W/8508081-8508081 FN3454-S SNP G -> T AC=1;AN=184;BQB=0.991436;DP=2936;DP4=1423,1439,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000681199;MQB=1.84149e-06;MQSB=0.230161;RPB=0.976598;SGB=39.2697;VDB=0.844934;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.7:8508082 chr07:008508082 0 W/8508082-8508082 FN3454-S SNP C -> T AC=1;AN=184;BQB=0.85184;DP=2921;DP4=1413,1429,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000684697;MQB=4.73602e-08;MQSB=0.151356;RPB=0.590523;SGB=23.2751;VDB=0.733484;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.7:8509731 chr07:008509731 0 W/8509731-8509731 FN-105 Single Base Substitution C-T INTRON HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN3999-S.SNP.7:8510452 chr07:008510452 0 W/8510452-8510452 FN3999-S SNP C -> T AC=1;AN=168;BQB=0.820714;DP=2676;DP4=1134,1435,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.74085e-06;MQSB=0.0770679;RPB=0.887043;SGB=-1.53256;VDB=0.376267;EFF=INTRON(MODIFIER||||272|LOC_Os07g14870|protein_coding|CODING|LOC_Os07g14870.1|4|1) FN4030-S.SNP.7:8512362 chr07:008512362 0 W/8512362-8512362 FN4030-S SNP T -> G AC=1;AN=168;BQB=0.947621;DP=2330;DP4=986,1218,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.16084e-09;MQSB=0.87457;RPB=0.974928;SGB=12.7756;VDB=0.255519;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.7:8528527 chr07:008528527 0 W/8528527-8528527 FN4275-S SNP C -> T AC=2;AN=170;BQB=0.835938;DP=2494;DP4=1272,1150,7,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.63808e-10;MQSB=0.999995;RPB=0.992435;SGB=83.4133;VDB=0.592253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.7:8531863 chr07:008531863 0 W/8531863-8531863 FN2282 SNP G -> A AC=2;AN=192;BQB=0.949228;DP=5278;DP4=2606,2227,41,43;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.60519e-45;MQSB=0.758553;RPB=0.843274;SGB=279.179;VDB=0.68928;EFF=UTR_3_PRIME(MODIFIER||88||124|LOC_Os07g14910|protein_coding|CODING|LOC_Os07g14910.1|2|1) FN3581-S.SNP.7:8534667 chr07:008534667 0 W/8534667-8534667 FN3581-S SNP G -> T AC=1;AN=190;BQB=0.763653;DP=2660;DP4=1250,1279,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.46607e-10;MQSB=0.991908;RPB=0.99997;SGB=64.5316;VDB=0.896383;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.7:8538215 chr07:008538215 0 W/8538215-8538215 FN446-S Single Base Substitution G-A INTRON HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2084-S.SNP.7:8540071 chr07:008540071 0 W/8540071-8540071 FN2084-S SNP A -> G AC=1;AN=168;BQB=0.62271;DP=2710;DP4=1737,934,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.78853e-10;MQSB=0.958694;RPB=0.559107;SGB=-103.201;VDB=0.170967;EFF=INTRON(MODIFIER||||83|LOC_Os07g14920|protein_coding|CODING|LOC_Os07g14920.1|1|1) FN678-S.SNP.7:8543616 chr07:008543616 0 W/8543616-8543616 FN678-S Single Base Substitution G-A INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3715-S.SNP.7:8546411 chr07:008546411 0 W/8546411-8546411 FN3715-S SNP C -> T AC=2;AN=190;BQB=0.628966;DP=2661;DP4=1294,1268,15,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71554e-14;MQSB=0.997593;RPB=0.680827;SGB=61.9679;VDB=0.125816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.7:8550464 chr07:008550464 0 W/8550464-8550464 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.608123;DP=2790;DP4=1440,1250,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.132616;MQB=0.784698;MQSB=0.0221402;RPB=0.211966;SGB=28.3187;VDB=0.539555;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.7:8555136 chr07:008555136 0 W/8555136-8555136 FN872-S Single Base Substitution T-C INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN724-S.SNP.7:8558628 chr07:008558628 0 W/8558628-8558628 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN-156.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN-156 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-8.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN-8 Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1122-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN1122-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1202-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN1202-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1317-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN1317-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1461-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN1461-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1624-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN1624-S Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2540-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN2540-S SNP A -> G AC=1;AN=198;BQB=0.819367;DP=3538;DP4=1711,1600,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.43823e-09;MQSB=0.896585;RPB=0.946834;SGB=26.7492;VDB=0.706638;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V279|865|LOC_Os07g14940|protein_coding|CODING|LOC_Os07g14940.1|4|1) FN3387-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN3387-S SNP A -> G AC=1;AN=184;BQB=0.919076;DP=2726;DP4=1252,1369,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.81945e-07;MQSB=0.970156;RPB=0.94157;SGB=25.1826;VDB=0.5;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V279|865|LOC_Os07g14940|protein_coding|CODING|LOC_Os07g14940.1|4|1) FN3705-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN3705-S SNP A -> G AC=2;AN=190;BQB=0.753532;DP=2616;DP4=1241,1242,15,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52581e-17;MQSB=0.855531;RPB=0.828451;SGB=121.957;VDB=0.832702;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V279|865|LOC_Os07g14940|protein_coding|CODING|LOC_Os07g14940.1|4|1) FN3994-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN3994-S SNP A -> G AC=2;AN=168;BQB=0.980799;DP=2461;DP4=1104,1220,18,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000406339;MQB=1.79732e-16;MQSB=0.999501;RPB=0.120958;SGB=89.641;VDB=0.66805;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V279|865|LOC_Os07g14940|protein_coding|CODING|LOC_Os07g14940.1|4|1) FN910-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN910-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 FN957-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. W500-4-7-1.SNP.7:8563563 chr07:008563563 0 W/8563563-8563563 W500-4-7-1 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN512-S.SNP.7:8568985 chr07:008568985 0 W/8568985-8568985 FN512-S Single Base Substitution G-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1470-S.SNP.7:8569088 chr07:008569088 0 W/8569088-8569088 FN1470-S Single Base Substitution T-C INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2373.SNP.7:8569402 chr07:008569402 0 W/8569402-8569402 FN2373 SNP T -> A AC=1;AN=192;BQB=0.21336;DP=5067;DP4=2446,2407,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.42976e-17;MQSB=0.132783;RPB=0.857217;SGB=140.497;VDB=0.669849;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.7:8576953 chr07:008576953 0 W/8576953-8576953 FN832-S Single Base Substitution A-T INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN911-S.SNP.7:8579963 chr07:008579963 0 W/8579963-8579963 FN911-S Single Base Substitution G-A INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN1679-S.SNP.7:8585143 chr07:008585143 0 W/8585143-8585143 FN1679-S SNP A -> C AC=2;AN=188;BQB=0.197465;DP=3859;DP4=2368,1429,31,21;HOB=0.0210502;ICB=0.494738;MQ=26;MQ0F=0.24566;MQB=0.897498;MQSB=3.88599e-32;RPB=0.95683;SGB=-165.055;VDB=0.438597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.7:8586804 chr07:008586804 0 W/8586804-8586804 FN1439-S Single Base Substitution G-C INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2381.SNP.7:8587210 chr07:008587210 0 W/8587210-8587210 FN2381 SNP T -> G AC=1;AN=192;BQB=0.944572;DP=3033;DP4=944,1845,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0454995;MQB=0.743403;MQSB=1.56551e-36;RPB=0.884051;SGB=40.0819;VDB=0.783268;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.7:8588492 chr07:008588492 0 W/8588492-8588492 FN897-S Single Base Substitution C-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2447.SNP.7:8590780 chr07:008590780 0 W/8590780-8590780 FN2447 SNP C -> T AC=1;AN=200;BQB=0.95546;DP=4517;DP4=2357,1853,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80859e-14;MQSB=0.909752;RPB=0.991804;SGB=50.3263;VDB=0.74714;EFF=INTRON(MODIFIER||||373|LOC_Os07g14970|protein_coding|CODING|LOC_Os07g14970.1|1|1) FN4103-S.SNP.7:8591240 chr07:008591240 0 W/8591240-8591240 FN4103-S SNP C -> T AC=1;AN=182;BQB=0.281596;DP=2939;DP4=1359,1514,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.43373e-05;MQSB=0.957268;RPB=0.138308;SGB=62.1548;VDB=0.323267;EFF=INTRON(MODIFIER||||373|LOC_Os07g14970|protein_coding|CODING|LOC_Os07g14970.1|3|1) FN3517-S.SNP.7:8592986 chr07:008592986 0 W/8592986-8592986 FN3517-S SNP T -> A AC=1;AN=188;BQB=0.988619;DP=2760;DP4=1381,1216,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.68445e-09;MQSB=0.796857;RPB=0.990004;SGB=31.1628;VDB=0.713529;EFF=STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R338*|386|LOC_Os07g14980|protein_coding|CODING|LOC_Os07g14980.1|1|1) FN3517-S.SNP.7:8592987 chr07:008592987 0 W/8592987-8592987 FN3517-S SNP A -> T AC=1;AN=188;BQB=0.681544;DP=2767;DP4=1372,1289,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31349e-09;MQSB=0.681411;RPB=0.999102;SGB=62.6088;VDB=0.661145;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A337|386|LOC_Os07g14980|protein_coding|CODING|LOC_Os07g14980.1|1|1) FN3310-S.SNP.7:8595415 chr07:008595415 0 W/8595415-8595415 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.464652;DP=3596;DP4=1766,1691,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75565e-08;MQSB=0.99996;RPB=0.229195;SGB=30.8405;VDB=0.607884;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A765V|1070|LOC_Os07g14990|protein_coding|CODING|LOC_Os07g14990.1|6|1) FN2224-S.SNP.7:8598078 chr07:008598078 0 W/8598078-8598078 FN2224-S SNP G -> C AC=1;AN=190;BQB=0.960357;DP=4447;DP4=2112,2075,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37721e-08;MQSB=0.999703;RPB=0.71234;SGB=71.8647;VDB=0.391324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T107S|1070|LOC_Os07g14990|protein_coding|CODING|LOC_Os07g14990.1|1|1) FN3849-S.SNP.7:8615878 chr07:008615878 0 W/8615878-8615878 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.928793;DP=2715;DP4=1405,1211,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.38208e-08;MQSB=0.933493;RPB=0.95993;SGB=30.704;VDB=0.532754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R113H|1029|LOC_Os07g15030|protein_coding|CODING|LOC_Os07g15030.1|1|1) FN814-S.SNP.7:8616193 chr07:008616193 0 W/8616193-8616193 FN814-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g15030 retrotransposon protein, putative, unclassified, expressed SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-112.SNP.7:8617388 chr07:008617388 0 W/8617388-8617388 FN-112 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN4150-S.SNP.7:8617841 chr07:008617841 0 W/8617841-8617841 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.825449;DP=2837;DP4=1436,1320,14,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.04895e-14;MQSB=0.999503;RPB=0.731138;SGB=92.2986;VDB=0.288543;EFF=INTRON(MODIFIER||||1029|LOC_Os07g15030|protein_coding|CODING|LOC_Os07g15030.1|3|1) FN3762-S.SNP.7:8618279 chr07:008618279 0 W/8618279-8618279 FN3762-S SNP C -> T AC=1;AN=190;BQB=0.40493;DP=3723;DP4=1819,1770,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000268601;MQB=1.21544e-05;MQSB=0.962082;RPB=0.992044;SGB=39.6545;VDB=0.817546;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P713|1029|LOC_Os07g15030|protein_coding|CODING|LOC_Os07g15030.1|4|1) FN943-S.SNP.7:8619785 chr07:008619785 0 W/8619785-8619785 FN943-S Single Base Substitution G-T INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1020-S.SNP.7:8633632 chr07:008633632 0 W/8633632-8633632 FN1020-S Single Base Substitution G-A STOP_GAINED HET LOC_Os07g15070 retrotransposon, putative, centromere-specific SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN769-S.SNP.7:8638678 chr07:008638678 0 W/8638678-8638678 FN769-S Single Base Substitution A-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2689-S.SNP.7:8639722 chr07:008639722 0 W/8639722-8639722 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.991671;DP=4963;DP4=2665,2002,6,9;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0546041;MQB=0.851287;MQSB=0;RPB=0.710381;SGB=43.8747;VDB=0.0360486;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1044|1385|LOC_Os07g15080|protein_coding|CODING|LOC_Os07g15080.1|3|1) FN_N1-202-3.SNP.7:8649244 chr07:008649244 0 W/8649244-8649244 FN_N1-202-3 Single Base Substitution C-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN-370.SNP.7:8652860 chr07:008652860 0 W/8652860-8652860 FN-370 Single Base Substitution G-T INTERGENIC HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2218-S.SNP.7:8653587 chr07:008653587 0 W/8653587-8653587 FN2218-S SNP C -> G AC=1;AN=190;BQB=0.704901;DP=4905;DP4=2258,2380,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.35104e-10;MQSB=0.920413;RPB=0.971073;SGB=67.3108;VDB=0.471111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.7:8655291 chr07:008655291 0 W/8655291-8655291 FN2563-S SNP A -> T AC=1;AN=198;BQB=0.104475;DP=4694;DP4=2669,1813,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.31277e-06;MQSB=0.905582;RPB=0.769765;SGB=11.1786;VDB=0.769036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.7:8655813 chr07:008655813 0 W/8655813-8655813 FN3841-S SNP C -> A AC=1;AN=190;BQB=0.886164;DP=2867;DP4=1323,1432,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.18669e-11;MQSB=0.996963;RPB=0.996363;SGB=33.8752;VDB=0.353815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.7:8658695 chr07:008658695 0 W/8658695-8658695 FN1106-S Single Base Substitution T-C INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN515-S.SNP.7:8659896 chr07:008659896 0 W/8659896-8659896 FN515-S Single Base Substitution T-A INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1382-S.SNP.7:8659926 chr07:008659926 0 W/8659926-8659926 FN1382-S Single Base Substitution T-C INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2719-S.SNP.7:8660769 chr07:008660769 0 W/8660769-8660769 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.642935;DP=4962;DP4=2408,2351,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.30033e-07;MQSB=0.94732;RPB=0.812359;SGB=40.4492;VDB=0.268014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.7:8672634 chr07:008672634 0 W/8672634-8672634 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.88499;DP=2285;DP4=1131,1109,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000437637;MQB=0.04516;MQSB=0.072052;RPB=0.774378;SGB=48.979;VDB=0.205941;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.7:8675827 chr07:008675827 0 W/8675827-8675827 FN846-S Single Base Substitution A-G INTRON HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2104-S.SNP.7:8679769 chr07:008679769 0 W/8679769-8679769 FN2104-S SNP T -> A AC=2;AN=168;BQB=0.32256;DP=4240;DP4=1984,2200,20,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.02433e-21;MQSB=0.999242;RPB=0.594655;SGB=-104.159;VDB=0.34786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.7:8680711 chr07:008680711 0 W/8680711-8680711 FN2354 SNP C -> A AC=1;AN=192;BQB=0.372179;DP=5051;DP4=2220,2472,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000593942;MQB=6.09358e-06;MQSB=1.7662e-09;RPB=0.584248;SGB=-107.312;VDB=0.0795939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.7:8680791 chr07:008680791 0 W/8680791-8680791 FN1075-S Single Base Substitution T-C INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2591-S.SNP.7:8688061 chr07:008688061 0 W/8688061-8688061 FN2591-S SNP G -> C AC=2;AN=198;BQB=0.998059;DP=3703;DP4=1630,1806,9,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.9235e-14;MQSB=0.971385;RPB=0.818481;SGB=95.5;VDB=0.068439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.7:8692159 chr07:008692159 0 W/8692159-8692159 FN2691-S SNP C -> A AC=2;AN=200;BQB=0.779674;DP=4270;DP4=2043,1967,17,29;HOB=0.0198;ICB=0.495051;MQ=18;MQ0F=0.176112;MQB=0.151539;MQSB=0;RPB=0.408849;SGB=54.4347;VDB=0.0706837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M264I|898|LOC_Os07g15140|protein_coding|CODING|LOC_Os07g15140.1|1|1) FN3673-S.SNP.7:8706159 chr07:008706159 0 W/8706159-8706159 FN3673-S SNP G -> A AC=1;AN=190;BQB=0.947765;DP=2613;DP4=1126,1393,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000765404;MQB=0.000263178;MQSB=0.498961;RPB=0.904289;SGB=8.33661;VDB=0.0491808;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-81.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN-81 Single Base Substitution A-G INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1034-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN1034-S Single Base Substitution A-G INTERGENIC HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN1290-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN1290-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1431-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN1431-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1513-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN1513-S Single Base Substitution A-G INTERGENIC Homo SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1579-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN1579-S Single Base Substitution A-G INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2179-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN2179-S SNP A -> G AC=2;AN=168;BQB=0.0134802;DP=3630;DP4=1993,1578,22,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.95748e-13;MQSB=0.96234;RPB=0.995359;SGB=-4.6021;VDB=0.816243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN2244-S SNP A -> G AC=2;AN=190;BQB=0.790336;DP=5020;DP4=2653,1964,24,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.01552e-22;MQSB=0.972164;RPB=0.948385;SGB=90.0605;VDB=0.86704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2628-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN2628-S SNP A -> G AC=2;AN=200;BQB=0.92554;DP=5019;DP4=2658,2089,31,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47954e-30;MQSB=0.958154;RPB=0.970073;SGB=233.866;VDB=0.749178;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN319-S Single Base Substitution A-G INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3386-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN3386-S SNP A -> G AC=1;AN=184;BQB=0.485686;DP=3140;DP4=1614,1391,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63026e-08;MQSB=0.931799;RPB=0.600522;SGB=3.75875;VDB=0.96562;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN466-S Single Base Substitution A-G INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN833-S.SNP.7:8716231 chr07:008716231 0 W/8716231-8716231 FN833-S Single Base Substitution A-G INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1443-S.SNP.7:8718991 chr07:008718991 0 W/8718991-8718991 FN1443-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1499-S.SNP.7:8719071 chr07:008719071 0 W/8719071-8719071 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4070-S.SNP.7:8723006 chr07:008723006 0 W/8723006-8723006 FN4070-S SNP C -> G AC=1;AN=182;BQB=0.950393;DP=3212;DP4=1581,1540,12,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.39859e-14;MQSB=0.992892;RPB=0.459284;SGB=93.7308;VDB=0.35215;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.7:8723007 chr07:008723007 0 W/8723007-8723007 FN4070-S SNP A -> G AC=1;AN=182;BQB=0.930958;DP=3220;DP4=1605,1538,12,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.52263e-16;MQSB=0.99939;RPB=0.369332;SGB=74.2472;VDB=0.259808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.7:8723465 chr07:008723465 0 W/8723465-8723465 FN2697-S SNP T -> A AC=2;AN=200;BQB=0.982322;DP=4973;DP4=2199,2556,33,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.33231e-27;MQSB=0.855867;RPB=0.994798;SGB=155.635;VDB=0.70114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.7:8724830 chr07:008724830 0 W/8724830-8724830 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.348389;DP=4946;DP4=2351,2319,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.65834e-15;MQSB=0.973859;RPB=0.98517;SGB=-10.0844;VDB=0.485234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.7:8727107 chr07:008727107 0 W/8727107-8727107 FN1027-S Single Base Substitution C-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN-363.SNP.7:8735938 chr07:008735938 0 W/8735938-8735938 FN-363 Single Base Substitution C-T INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2408.SNP.7:8739772 chr07:008739772 0 W/8739772-8739772 FN2408 SNP T -> C AC=1;AN=200;BQB=0.995574;DP=4947;DP4=1963,2734,2,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27557e-05;MQSB=0.750094;RPB=0.944972;SGB=16.4591;VDB=0.248536;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.7:8741618 chr07:008741618 0 W/8741618-8741618 FN4081-S SNP C -> G AC=1;AN=182;BQB=0.899769;DP=2450;DP4=1299,1040,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.04499e-07;MQSB=0.947262;RPB=0.720871;SGB=62.1548;VDB=0.930356;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.7:8750685 chr07:008750685 0 W/8750685-8750685 FN953-S Single Base Substitution G-C INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3729-S.SNP.7:8752087 chr07:008752087 0 W/8752087-8752087 FN3729-S SNP A -> G AC=1;AN=190;BQB=0.938186;DP=2258;DP4=1292,889,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29705e-07;MQSB=0.990717;RPB=0.919024;SGB=44.5415;VDB=0.189687;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D202|202|LOC_Os07g15180|protein_coding|CODING|LOC_Os07g15180.1|3|1) FN2378.SNP.7:8752538 chr07:008752538 0 W/8752538-8752538 FN2378 SNP G -> A AC=1;AN=192;BQB=0.412595;DP=4869;DP4=2244,2274,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205381;MQB=6.27629e-17;MQSB=0.998915;RPB=0.906173;SGB=67.3792;VDB=0.608506;EFF=INTRON(MODIFIER||||202|LOC_Os07g15180|protein_coding|CODING|LOC_Os07g15180.1|1|1) FN3823-S.SNP.7:8758577 chr07:008758577 0 W/8758577-8758577 FN3823-S SNP A -> G AC=1;AN=190;BQB=0.791808;DP=3377;DP4=1680,1557,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14919e-05;MQSB=0.914223;RPB=0.938344;SGB=10.8904;VDB=0.625605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.7:8760384 chr07:008760384 0 W/8760384-8760384 FN3768-S SNP C -> A AC=1;AN=190;BQB=0.989641;DP=3064;DP4=1519,1453,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.96829e-12;MQSB=0.98824;RPB=0.593318;SGB=33.8752;VDB=0.400765;EFF=INTRON(MODIFIER||||62|LOC_Os07g15200|protein_coding|CODING|LOC_Os07g15200.1|1|1) FN3369-S.SNP.7:8762155 chr07:008762155 0 W/8762155-8762155 FN3369-S SNP G -> C AC=1;AN=184;BQB=0.806112;DP=3703;DP4=2038,1477,13,17;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.49459e-13;MQSB=0.603246;RPB=0.499577;SGB=61.1019;VDB=0.060959;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.7:8762247 chr07:008762247 0 W/8762247-8762247 FN3369-S SNP G -> C AC=1;AN=184;BQB=0.968117;DP=2805;DP4=2275,313,16,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=8.7804e-10;MQSB=0.991614;RPB=0.986422;SGB=93.9603;VDB=0.951235;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.7:8767750 chr07:008767750 0 W/8767750-8767750 FN354-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g15210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN1568-S.SNP.7:8768911 chr07:008768911 0 W/8768911-8768911 FN1568-S Single Base Substitution A-T INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN_N1-130-1.SNP.7:8769935 chr07:008769935 0 W/8769935-8769935 FN_N1-130-1 Single Base Substitution C-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1142-S.SNP.7:8770592 chr07:008770592 0 W/8770592-8770592 FN1142-S Single Base Substitution A-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN520-S.SNP.7:8771040 chr07:008771040 0 W/8771040-8771040 FN520-S Single Base Substitution C-T INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN322-S.SNP.7:8773729 chr07:008773729 0 W/8773729-8773729 FN322-S Single Base Substitution T-C INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN1754-S.SNP.7:8775431 chr07:008775431 0 W/8775431-8775431 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.902565;DP=3256;DP4=1698,1517,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22845e-10;MQSB=0.990204;RPB=0.998053;SGB=11.7114;VDB=0.996323;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.7:8778585 chr07:008778585 0 W/8778585-8778585 FN-225 Single Base Substitution T-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3450-S.SNP.7:8798840 chr07:008798840 0 W/8798840-8798840 FN3450-S SNP G -> T AC=1;AN=184;BQB=0.994246;DP=2924;DP4=1343,1511,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0355677;MQB=0.180141;MQSB=0.0537516;RPB=0.743657;SGB=26.1347;VDB=0.383129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L460F|1129|LOC_Os07g15260|protein_coding|CODING|LOC_Os07g15260.1|3|1) FN1106-S.SNP.7:8801286 chr07:008801286 0 W/8801286-8801286 FN1106-S Single Base Substitution G-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3524-S.SNP.7:8810635 chr07:008810635 0 W/8810635-8810635 FN3524-S SNP C -> T AC=1;AN=188;BQB=0.99992;DP=2445;DP4=1110,1235,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4034e-08;MQSB=0.975548;RPB=0.508758;SGB=35.9843;VDB=0.730968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P736S|858|LOC_Os07g15270|protein_coding|CODING|LOC_Os07g15270.1|2|1) FN1028-S.SNP.7:8811045 chr07:008811045 0 W/8811045-8811045 FN1028-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g15270 RNA-binding region RNP-1, putative, expressed SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3564-S.SNP.7:8817664 chr07:008817664 0 W/8817664-8817664 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.890805;DP=3455;DP4=1893,1467,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02284e-10;MQSB=0.439546;RPB=0.843747;SGB=89.8686;VDB=0.917344;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.7:8821755 chr07:008821755 0 W/8821755-8821755 FN460-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g15290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1349-S.SNP.7:8822829 chr07:008822829 0 W/8822829-8822829 FN1349-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN2650-S.SNP.7:8822964 chr07:008822964 0 W/8822964-8822964 FN2650-S SNP C -> G AC=1;AN=200;BQB=0.845893;DP=4243;DP4=1992,2002,5,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00141409;MQB=0.000392755;MQSB=0.00378425;RPB=0.98634;SGB=49.6594;VDB=0.522028;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.7:8827876 chr07:008827876 0 W/8827876-8827876 FN1348-S Single Base Substitution A-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1012-S.SNP.7:8829323 chr07:008829323 0 W/8829323-8829323 FN1012-S Single Base Substitution G-A INTRON HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN863-S.SNP.7:8834459 chr07:008834459 0 W/8834459-8834459 FN863-S Single Base Substitution T-C INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1720-S.SNP.7:8834884 chr07:008834884 0 W/8834884-8834884 FN1720-S SNP C -> T AC=2;AN=188;BQB=0.915842;DP=1698;DP4=745,909,8,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.74442e-06;MQSB=0.843464;RPB=0.963117;SGB=20.9896;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.7:8839721 chr07:008839721 0 W/8839721-8839721 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.82127;DP=4185;DP4=2114,1847,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238949;MQB=2.68593e-10;MQSB=0.919238;RPB=0.410922;SGB=12.5396;VDB=0.735154;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.7:8840138 chr07:008840138 0 W/8840138-8840138 FN2771-S SNP G -> A AC=2;AN=198;BQB=0.279187;DP=3990;DP4=1784,1916,19,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.10571e-23;MQSB=0.999988;RPB=0.761696;SGB=140.812;VDB=0.895994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.7:8840919 chr07:008840919 0 W/8840919-8840919 FN2247-S SNP G -> A AC=1;AN=190;BQB=0.809812;DP=2292;DP4=1731,392,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000244517;MQSB=0.0212861;RPB=0.324063;SGB=13.4442;VDB=0.399878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.7:8867456 chr07:008867456 0 W/8867456-8867456 FN1366-S Single Base Substitution T-A INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1411-S.SNP.7:8868613 chr07:008868613 0 W/8868613-8868613 FN1411-S Single Base Substitution C-T INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3548-S.SNP.7:8870715 chr07:008870715 0 W/8870715-8870715 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.935269;DP=2874;DP4=1452,1337,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.85649e-07;MQSB=0.87953;RPB=0.984173;SGB=44.4357;VDB=0.589945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.7:8871049 chr07:008871049 0 W/8871049-8871049 FN3794-S SNP T -> C AC=2;AN=190;BQB=0.661388;DP=2781;DP4=1305,1390,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.75712e-10;MQSB=0.96032;RPB=0.549876;SGB=90.0802;VDB=0.850726;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.7:8871409 chr07:008871409 0 W/8871409-8871409 FN439-S Single Base Substitution A-G INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-274.SNP.7:8885360 chr07:008885360 0 W/8885360-8885360 FN-274 Single Base Substitution C-T INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-18.SNP.7:8889394 chr07:008889394 0 W/8889394-8889394 FN-18 Single Base Substitution A-C INTERGENIC Homo SNo: 18, Mutant_ID: FN-18, Generation: M2, Mutations: 69, Genes: 14, Seed availability: Yes. FN2082-S.SNP.7:8893194 chr07:008893194 0 W/8893194-8893194 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.833939;DP=4072;DP4=1742,2280,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=9.47394e-08;MQSB=0.0624893;RPB=0.900407;SGB=15.6372;VDB=0.136433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.7:8902460 chr07:008902460 0 W/8902460-8902460 FN2572-S SNP C -> G AC=2;AN=198;BQB=0.796585;DP=3730;DP4=1818,1652,41,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.0703e-39;MQSB=0.81544;RPB=0.927327;SGB=260.07;VDB=0.650767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.7:8902460 chr07:008902460 0 W/8902460-8902460 FN2572-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2689-S.SNP.7:8904252 chr07:008904252 0 W/8904252-8904252 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.965581;DP=4762;DP4=2300,2117,10,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00146997;MQB=6.1852e-07;MQSB=0.358601;RPB=0.779329;SGB=47.4799;VDB=0.472913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.7:8904713 chr07:008904713 0 W/8904713-8904713 FN2335 SNP C -> T AC=1;AN=192;BQB=0.981011;DP=5191;DP4=2503,2321,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000192641;MQB=6.79653e-08;MQSB=0.218726;RPB=0.889499;SGB=16.7409;VDB=0.624434;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.7:8914091 chr07:008914091 0 W/8914091-8914091 FN910-S Single Base Substitution A-C INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3846-S.SNP.7:8914132 chr07:008914132 0 W/8914132-8914132 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.984534;DP=3460;DP4=1619,1722,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17245e-09;MQSB=0.996769;RPB=0.0513457;SGB=71.8647;VDB=0.606363;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.7:8914668 chr07:008914668 0 W/8914668-8914668 FN-189 Single Base Substitution G-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3525-S.SNP.7:8918134 chr07:008918134 0 W/8918134-8918134 FN3525-S SNP C -> T AC=1;AN=188;BQB=0.976131;DP=2854;DP4=1521,1267,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000700771;MQB=0.000320573;MQSB=0.263696;RPB=0.763432;SGB=28.8977;VDB=0.836722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A211T|768|LOC_Os07g15420|protein_coding|CODING|LOC_Os07g15420.1|1|1) FN-382.SNP.7:8922449 chr07:008922449 0 W/8922449-8922449 FN-382 Single Base Substitution G-A INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN2599-S.SNP.7:8924080 chr07:008924080 0 W/8924080-8924080 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.817643;DP=4162;DP4=1819,2093,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.52813e-07;MQSB=0.980409;RPB=0.984902;SGB=32.9588;VDB=0.316685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:8924239 chr07:008924239 0 W/8924239-8924239 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.959378;DP=4722;DP4=2465,1953,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41108e-11;MQSB=0.894163;RPB=0.985357;SGB=86.5007;VDB=0.99732;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.7:8926503 chr07:008926503 0 W/8926503-8926503 FN3355-S SNP A -> G AC=1;AN=184;BQB=0.997731;DP=2580;DP4=1192,1211,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00020858;MQSB=0.875489;RPB=0.418376;SGB=30.6558;VDB=0.535655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D115G|328|LOC_Os07g15430|protein_coding|CODING|LOC_Os07g15430.1|1|1) FN3748-S.SNP.7:8941722 chr07:008941722 0 W/8941722-8941722 FN3748-S SNP C -> A AC=2;AN=190;BQB=0.910002;DP=2914;DP4=1437,1358,18,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.80869e-19;MQSB=0.996877;RPB=0.491616;SGB=33.6348;VDB=0.701059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L278F|1314|LOC_Os07g15440|protein_coding|CODING|LOC_Os07g15440.1|5|1) FN1696-S.SNP.7:8946346 chr07:008946346 0 W/8946346-8946346 FN1696-S SNP T -> G AC=2;AN=188;BQB=0.981592;DP=3250;DP4=1477,1726,6,17;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00307692;MQB=0.0021285;MQSB=0.000810545;RPB=0.89386;SGB=98.9552;VDB=0.844693;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.7:8947084 chr07:008947084 0 W/8947084-8947084 FN4183-S SNP C -> G AC=1;AN=170;BQB=0.850476;DP=2363;DP4=1230,1058,12,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05937e-08;MQSB=0.932084;RPB=0.771288;SGB=17.4413;VDB=0.234327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1016-S.SNP.7:8949727 chr07:008949727 0 W/8949727-8949727 FN1016-S Single Base Substitution G-A INTERGENIC HOMO SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1697-S.SNP.7:8970228 chr07:008970228 0 W/8970228-8970228 FN1697-S SNP A -> G AC=1;AN=188;BQB=0.0937438;DP=2054;DP4=672,1334,6,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.0879e-07;MQSB=0.753115;RPB=0.755833;SGB=31.1628;VDB=0.404547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N457S|518|LOC_Os07g15460|protein_coding|CODING|LOC_Os07g15460.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N416S|477|LOC_Os07g15460|protein_coding|CODING|LOC_Os07g15460.2|13|1) FN3437-S.SNP.7:8973012 chr07:008973012 0 W/8973012-8973012 FN3437-S SNP G -> A AC=2;AN=184;BQB=0.837327;DP=3048;DP4=1110,1832,6,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.92317e-14;MQSB=0.805903;RPB=0.381909;SGB=134.656;VDB=0.174784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.7:8984277 chr07:008984277 0 W/8984277-8984277 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.279783;DP=4134;DP4=2020,1824,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.41511e-10;MQSB=0.140816;RPB=0.382841;SGB=50.1053;VDB=0.871069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.7:8985118 chr07:008985118 0 W/8985118-8985118 FN2464 SNP A -> G AC=2;AN=200;BQB=0.998993;DP=4222;DP4=1924,1950,11,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.89578e-12;MQSB=0.982185;RPB=0.957188;SGB=100.316;VDB=0.627351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.7:8991658 chr07:008991658 0 W/8991658-8991658 FN2551-S SNP A -> G AC=1;AN=198;BQB=0.0893567;DP=4300;DP4=1938,2164,10,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50248e-12;MQSB=0.993342;RPB=0.824947;SGB=26.8957;VDB=0.787963;EFF=INTRON(MODIFIER||||246|LOC_Os07g15490|protein_coding|CODING|LOC_Os07g15490.1|1|1) FN476-S.SNP.7:8991903 chr07:008991903 0 W/8991903-8991903 FN476-S Single Base Substitution T-A INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1459-S.SNP.7:8993736 chr07:008993736 0 W/8993736-8993736 FN1459-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN-30.SNP.7:8994596 chr07:008994596 0 W/8994596-8994596 FN-30 Single Base Substitution T-C INTRON Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3454-S.SNP.7:8994596 chr07:008994596 0 W/8994596-8994596 FN3454-S SNP T -> C AC=1;AN=184;BQB=0.958569;DP=2443;DP4=1040,1330,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00018103;MQSB=0.94948;RPB=0.0929566;SGB=30.6558;VDB=0.185412;EFF=INTRON(MODIFIER||||442|LOC_Os07g15500|protein_coding|CODING|LOC_Os07g15500.1|7|1) FN3776-S.SNP.7:8994596 chr07:008994596 0 W/8994596-8994596 FN3776-S SNP T -> C AC=1;AN=190;BQB=0.936555;DP=2531;DP4=1121,1310,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32779e-05;MQSB=0.99768;RPB=0.341001;SGB=30.8803;VDB=0.114068;EFF=INTRON(MODIFIER||||442|LOC_Os07g15500|protein_coding|CODING|LOC_Os07g15500.1|7|1) FN723-S.SNP.7:8994596 chr07:008994596 0 W/8994596-8994596 FN723-S Single Base Substitution T-C INTRON HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN3613-S.SNP.7:8998042 chr07:008998042 0 W/8998042-8998042 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.961911;DP=2564;DP4=1113,1328,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.61101e-11;MQSB=0.996023;RPB=0.711142;SGB=80.9724;VDB=0.427044;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.7:8999361 chr07:008999361 0 W/8999361-8999361 FN1627-S Single Base Substitution C-T INTRON HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. W607-2-1.SNP.7:9015562 chr07:009015562 0 W/9015562-9015562 W607-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. W607-2-1.SNP.7:9015621 chr07:009015621 0 W/9015621-9015621 W607-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN451-S.SNP.7:9016243 chr07:009016243 0 W/9016243-9016243 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3712-S.SNP.7:9034937 chr07:009034937 0 W/9034937-9034937 FN3712-S SNP T -> C AC=1;AN=190;BQB=0.992953;DP=2668;DP4=1356,1202,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=6.68621e-05;MQSB=0.407127;RPB=0.814151;SGB=36.1006;VDB=0.818196;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.7:9037462 chr07:009037462 0 W/9037462-9037462 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.992916;DP=2843;DP4=1358,1388,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.61344e-10;MQSB=0.989254;RPB=0.924198;SGB=50.3161;VDB=0.111833;EFF=INTRON(MODIFIER||||564|LOC_Os07g15600|protein_coding|CODING|LOC_Os07g15600.1|1|1) FN2542-S.SNP.7:9050216 chr07:009050216 0 W/9050216-9050216 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.995354;DP=4551;DP4=2128,2182,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.55895e-17;MQSB=0.95651;RPB=0.880242;SGB=57.8907;VDB=0.2537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.7:9052230 chr07:009052230 0 W/9052230-9052230 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.910034;DP=4197;DP4=1758,2182,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000592872;MQSB=0.795112;RPB=0.33373;SGB=-5.00654;VDB=0.246704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.7:9065726 chr07:009065726 0 W/9065726-9065726 FN2458 SNP C -> T AC=1;AN=200;BQB=0.59229;DP=4254;DP4=1971,2012,9,8;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0307945;MQB=0.630761;MQSB=2.87286e-29;RPB=0.122642;SGB=51.0851;VDB=0.026489;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W163*|1048|LOC_Os07g15630|protein_coding|CODING|LOC_Os07g15630.1|1|1);LOF=(LOC_Os07g15630|LOC_Os07g15630|1|1.00);NMD=(LOC_Os07g15630|LOC_Os07g15630|1|1.00) FN3677-S.SNP.7:9067522 chr07:009067522 0 W/9067522-9067522 FN3677-S SNP G -> T AC=1;AN=190;BQB=0.784127;DP=2257;DP4=1372,798,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0159504;MQB=0.0529083;MQSB=4.07891e-29;RPB=0.630628;SGB=39.9877;VDB=0.619026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.7:9068458 chr07:009068458 0 W/9068458-9068458 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.917091;DP=4973;DP4=2339,2430,4,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.96393e-13;MQSB=0.841207;RPB=0.559053;SGB=95.7111;VDB=0.776172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1712-S.SNP.7:9069206 chr07:009069206 0 W/9069206-9069206 FN1712-S SNP A -> T AC=1;AN=188;BQB=0.476935;DP=4104;DP4=2123,1940,17,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02861e-10;MQSB=0.974764;RPB=0.947295;SGB=19.4279;VDB=0.00153851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.7:9076192 chr07:009076192 0 W/9076192-9076192 FN2423 SNP G -> T AC=1;AN=200;BQB=0.748204;DP=4483;DP4=2209,2007,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87402e-08;MQSB=0.989234;RPB=0.479778;SGB=-14.3206;VDB=0.505421;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V498|750|LOC_Os07g15640|protein_coding|CODING|LOC_Os07g15640.1|2|1) FN1175-S.SNP.7:9080541 chr07:009080541 0 W/9080541-9080541 FN1175-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2599-S.SNP.7:9084883 chr07:009084883 0 W/9084883-9084883 FN2599-S SNP T -> C AC=2;AN=198;BQB=0.972427;DP=4081;DP4=1870,1915,19,23;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000735114;MQB=5.51288e-12;MQSB=0.660709;RPB=0.528274;SGB=140.812;VDB=0.387291;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.7:9087153 chr07:009087153 0 W/9087153-9087153 FN_777-2-1 Single Base Substitution A-G HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN918-S.SNP.7:9087528 chr07:009087528 0 W/9087528-9087528 FN918-S Single Base Substitution G-A INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN723-S.SNP.7:9091392 chr07:009091392 0 W/9091392-9091392 FN723-S Single Base Substitution T-C INTRON HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN3725-S.SNP.7:9092249 chr07:009092249 0 W/9092249-9092249 FN3725-S SNP G -> T AC=1;AN=190;BQB=0.950311;DP=2942;DP4=1281,1544,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.63433e-07;MQSB=0.971683;RPB=0.138176;SGB=49.0954;VDB=0.0632579;EFF=INTRON(MODIFIER||||292|LOC_Os07g15660|protein_coding|CODING|LOC_Os07g15660.1|3|1) FN-134.SNP.7:9093934 chr07:009093934 0 W/9093934-9093934 FN-134 Single Base Substitution A-T INTRON HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN757-S.SNP.7:9101666 chr07:009101666 0 W/9101666-9101666 FN757-S Single Base Substitution A-G INTRON HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2184-S.SNP.7:9103025 chr07:009103025 0 W/9103025-9103025 FN2184-S SNP G -> T AC=2;AN=190;BQB=0.993376;DP=5692;DP4=2604,2250,21,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=4.28673e-10;MQSB=0.00204884;RPB=0.217113;SGB=158.388;VDB=0.627156;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.7:9115803 chr07:009115803 0 W/9115803-9115803 FN4052-S SNP A -> G AC=1;AN=168;BQB=0.981656;DP=3002;DP4=1130,1688,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.97731e-16;MQSB=0.59966;RPB=0.680771;SGB=79.3486;VDB=0.858378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.7:9121285 chr07:009121285 0 W/9121285-9121285 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.828006;DP=4125;DP4=1969,1894,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000242424;MQB=1.49408e-07;MQSB=0.422363;RPB=0.936633;SGB=23.6597;VDB=0.71837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.7:9121314 chr07:009121314 0 W/9121314-9121314 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN901-S.SNP.7:9124012 chr07:009124012 0 W/9124012-9124012 FN901-S Single Base Substitution C-T INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2263-S.SNP.7:9136644 chr07:009136644 0 W/9136644-9136644 FN2263-S SNP G -> A AC=1;AN=190;BQB=0.00341575;DP=5563;DP4=2654,2235,269,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0163581;MQB=0;MQSB=7.29279e-09;RPB=5.35955e-40;SGB=-3980.81;VDB=2.54459e-27;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.7:9140633 chr07:009140633 0 W/9140633-9140633 FN-181 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g15740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-133.SNP.7:9142160 chr07:009142160 0 W/9142160-9142160 FN-133 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g15740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN2246-S.SNP.7:9144583 chr07:009144583 0 W/9144583-9144583 FN2246-S SNP T -> A AC=2;AN=190;BQB=0.61765;DP=5005;DP4=2303,2237,23,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.0001998;MQB=5.02685e-20;MQSB=0.269481;RPB=0.529655;SGB=-49.7081;VDB=0.555859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q599H|723|LOC_Os07g15760|protein_coding|CODING|LOC_Os07g15760.1|7|1) FN1065-S.SNP.7:9144649 chr07:009144649 0 W/9144649-9144649 FN1065-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2428.SNP.7:9144649 chr07:009144649 0 W/9144649-9144649 FN2428 SNP A -> T AC=2;AN=200;BQB=0.992611;DP=4350;DP4=2039,2032,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.25173e-17;MQSB=0.866417;RPB=0.982001;SGB=137.158;VDB=0.0993827;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V577|723|LOC_Os07g15760|protein_coding|CODING|LOC_Os07g15760.1|7|1) FN2538-S.SNP.7:9149402 chr07:009149402 0 W/9149402-9149402 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.856128;DP=4069;DP4=2008,1816,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00183348;MQSB=0.999983;RPB=0.578934;SGB=40.3588;VDB=0.245704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.7:9154157 chr07:009154157 0 W/9154157-9154157 FN2682-S SNP A -> T AC=1;AN=200;BQB=0.973796;DP=4745;DP4=1918,2530,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05389e-09;MQSB=0.862194;RPB=0.26468;SGB=51.0851;VDB=0.252995;EFF=INTRON(MODIFIER||||287|LOC_Os07g15770|protein_coding|CODING|LOC_Os07g15770.1|2|1) FN886-S.SNP.7:9154182 chr07:009154182 0 W/9154182-9154182 FN886-S Single Base Substitution G-A INTRON HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN-113.SNP.7:9162061 chr07:009162061 0 W/9162061-9162061 FN-113 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN1373-S.SNP.7:9162061 chr07:009162061 0 W/9162061-9162061 FN1373-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-68.SNP.7:9164338 chr07:009164338 0 W/9164338-9164338 FN-68 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1104-S.SNP.7:9168550 chr07:009168550 0 W/9168550-9168550 FN1104-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g15790 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN718-S.SNP.7:9177270 chr07:009177270 0 W/9177270-9177270 FN718-S Single Base Substitution A-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1097-S.SNP.7:9180978 chr07:009180978 0 W/9180978-9180978 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2446.SNP.7:9188146 chr07:009188146 0 W/9188146-9188146 FN2446 SNP A -> G AC=1;AN=200;BQB=0.766965;DP=4244;DP4=2092,1902,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235627;MQB=2.24474e-08;MQSB=0.941682;RPB=0.769778;SGB=54.2646;VDB=0.700822;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.7:9189037 chr07:009189037 0 W/9189037-9189037 FN908-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g15820 expressed protein SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN941-S.SNP.7:9189255 chr07:009189255 0 W/9189255-9189255 FN941-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN941-S.SNP.7:9189257 chr07:009189257 0 W/9189257-9189257 FN941-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g15820 expressed protein SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN941-S.SNP.7:9189259 chr07:009189259 0 W/9189259-9189259 FN941-S Single Base Substitution C-A START_LOST HOMO LOC_Os07g15820 expressed protein SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2423.SNP.7:9189538 chr07:009189538 0 W/9189538-9189538 FN2423 SNP A -> G AC=1;AN=200;BQB=0.556454;DP=4395;DP4=2022,2041,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08133e-09;MQSB=0.988175;RPB=0.747073;SGB=61.9006;VDB=0.915462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.7:9194280 chr07:009194280 0 W/9194280-9194280 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.95636;DP=2922;DP4=1297,1477,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1268e-07;MQSB=0.98922;RPB=0.964911;SGB=21.1058;VDB=0.984356;EFF=INTRON(MODIFIER||||286|LOC_Os07g15830|protein_coding|CODING|LOC_Os07g15830.1|2|1) FN2535-S.SNP.7:9195249 chr07:009195249 0 W/9195249-9195249 FN2535-S SNP C -> A AC=1;AN=198;BQB=0.947996;DP=4393;DP4=2009,2186,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00159344;MQB=0.000176749;MQSB=0.774141;RPB=0.560414;SGB=58.7391;VDB=0.630944;EFF=INTRON(MODIFIER||||286|LOC_Os07g15830|protein_coding|CODING|LOC_Os07g15830.1|1|1) FN2689-S.SNP.7:9195737 chr07:009195737 0 W/9195737-9195737 FN2689-S SNP C -> A AC=1;AN=200;BQB=0.816507;DP=4896;DP4=2396,2220,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0806e-15;MQSB=0.998194;RPB=0.776968;SGB=-6.45336;VDB=0.803072;EFF=INTRON(MODIFIER||||286|LOC_Os07g15830|protein_coding|CODING|LOC_Os07g15830.1|1|1) FN849-S.SNP.7:9197305 chr07:009197305 0 W/9197305-9197305 FN849-S Single Base Substitution A-C INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-23.SNP.7:9197336 chr07:009197336 0 W/9197336-9197336 FN-23 Single Base Substitution A-T INTERGENIC Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-69.SNP.7:9197336 chr07:009197336 0 W/9197336-9197336 FN-69 Single Base Substitution A-T INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN3950-S.SNP.7:9197336 chr07:009197336 0 W/9197336-9197336 FN3950-S SNP A -> T AC=1;AN=168;BQB=0.999845;DP=2447;DP4=1220,1134,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.39323e-08;MQSB=1;RPB=0.739414;SGB=61.0344;VDB=0.39454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.7:9199806 chr07:009199806 0 W/9199806-9199806 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.928869;DP=2468;DP4=1221,1172,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10813e-05;MQSB=0.994394;RPB=0.994042;SGB=30.8803;VDB=0.50238;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.7:9201009 chr07:009201009 0 W/9201009-9201009 FN769-S Single Base Substitution T-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1304-S.SNP.7:9202531 chr07:009202531 0 W/9202531-9202531 FN1304-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g15840 retrotransposon, putative, centromere-specific, expressed SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN727-S.SNP.7:9205525 chr07:009205525 0 W/9205525-9205525 FN727-S Single Base Substitution C-T INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN1285-S.SNP.7:9206890 chr07:009206890 0 W/9206890-9206890 FN1285-S Single Base Substitution A-G INTRON HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN3837-S.SNP.7:9208790 chr07:009208790 0 W/9208790-9208790 FN3837-S SNP A -> G AC=2;AN=190;BQB=0.872395;DP=2900;DP4=1299,1497,14,11;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.40601e-07;MQSB=0.751169;RPB=0.772103;SGB=108.296;VDB=0.661586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D164G|797|LOC_Os07g15850|protein_coding|CODING|LOC_Os07g15850.1|4|1) FN497-S.SNP.7:9211739 chr07:009211739 0 W/9211739-9211739 FN497-S Single Base Substitution G-A INTRON HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2599-S.SNP.7:9214351 chr07:009214351 0 W/9214351-9214351 FN2599-S SNP G -> T AC=1;AN=198;BQB=0.728164;DP=3945;DP4=1699,1981,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.43394e-09;MQSB=0.992683;RPB=0.839308;SGB=6.15916;VDB=0.36192;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.7:9223392 chr07:009223392 0 W/9223392-9223392 FN2681-S SNP A -> G AC=2;AN=200;BQB=0.735949;DP=4756;DP4=2326,2212,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.00496e-23;MQSB=0.977251;RPB=0.359823;SGB=94.6142;VDB=0.328742;EFF=INTRON(MODIFIER||||289|LOC_Os07g15880|protein_coding|CODING|LOC_Os07g15880.1|2|1) FN2638-S.SNP.7:9223552 chr07:009223552 0 W/9223552-9223552 FN2638-S SNP A -> T AC=2;AN=200;BQB=0.746853;DP=4783;DP4=2426,2163,19,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15661e-22;MQSB=0.977187;RPB=0.965136;SGB=134.004;VDB=0.576827;EFF=INTRON(MODIFIER||||289|LOC_Os07g15880|protein_coding|CODING|LOC_Os07g15880.1|2|1) FN3917-S.SNP.7:9231280 chr07:009231280 0 W/9231280-9231280 FN3917-S SNP G -> A AC=1;AN=158;BQB=0.762633;DP=2761;DP4=1303,1376,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00977907;MQB=0.00016895;MQSB=0.976906;RPB=0.86799;SGB=14.3409;VDB=0.66732;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V771|1095|LOC_Os07g15890|protein_coding|CODING|LOC_Os07g15890.1|5|1) FN3401-S.SNP.7:9234496 chr07:009234496 0 W/9234496-9234496 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.88867;DP=3120;DP4=1477,1532,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.64359e-07;MQSB=0.983588;RPB=0.935631;SGB=44.2207;VDB=0.667077;EFF=INTRON(MODIFIER||||1095|LOC_Os07g15890|protein_coding|CODING|LOC_Os07g15890.1|1|1) FN4163-S.SNP.7:9239315 chr07:009239315 0 W/9239315-9239315 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.985818;DP=2268;DP4=1271,933,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.79199e-08;MQSB=0.97312;RPB=0.0555857;SGB=61.2001;VDB=0.211126;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.7:9240332 chr07:009240332 0 W/9240332-9240332 FN1371-S Single Base Substitution C-T INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2597-S.SNP.7:9241995 chr07:009241995 0 W/9241995-9241995 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.175357;DP=3545;DP4=1557,1781,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000311041;MQSB=0.85462;RPB=0.999716;SGB=31.1689;VDB=0.50952;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.7:9247049 chr07:009247049 0 W/9247049-9247049 FN1029-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g15910 expressed protein SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1477-S.SNP.7:9254972 chr07:009254972 0 W/9254972-9254972 FN1477-S Single Base Substitution A-G INTRON HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN4031-S.SNP.7:9256957 chr07:009256957 0 W/9256957-9256957 FN4031-S SNP T -> A AC=2;AN=168;BQB=0.634752;DP=2729;DP4=1172,1376,18,19;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.24627e-11;MQSB=0.391467;RPB=0.946027;SGB=158.512;VDB=0.297721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.7:9262232 chr07:009262232 0 W/9262232-9262232 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.678544;DP=3932;DP4=1834,1894,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.07637e-12;MQSB=0.989257;RPB=0.777229;SGB=17.325;VDB=0.0306906;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A82V|327|LOC_Os07g15940|protein_coding|CODING|LOC_Os07g15940.1|1|1) FN-334.SNP.7:9267216 chr07:009267216 0 W/9267216-9267216 FN-334 Single Base Substitution A-T INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1102-S.SNP.7:9268735 chr07:009268735 0 W/9268735-9268735 FN1102-S Single Base Substitution C-G INTERGENIC HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2246-S.SNP.7:9270528 chr07:009270528 0 W/9270528-9270528 FN2246-S SNP C -> A AC=2;AN=190;BQB=0.146642;DP=3848;DP4=2208,1342,19,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49203e-16;MQSB=0.516593;RPB=0.945885;SGB=131.065;VDB=0.0366396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.7:9273667 chr07:009273667 0 W/9273667-9273667 FN2207-S SNP T -> A AC=1;AN=190;BQB=0.654125;DP=4809;DP4=2238,2175,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.42258e-06;MQSB=0.0315627;RPB=0.944405;SGB=8.77275;VDB=0.673997;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.7:9276831 chr07:009276831 0 W/9276831-9276831 FN4177-S SNP T -> A AC=1;AN=170;BQB=0.731371;DP=2443;DP4=1156,1202,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.36594e-09;MQSB=0.985652;RPB=0.680572;SGB=38.3207;VDB=0.224506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.7:9284158 chr07:009284158 0 W/9284158-9284158 FN3637-S SNP C -> G AC=1;AN=190;BQB=0.918064;DP=3113;DP4=1261,1764,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.214263;MQB=0.929874;MQSB=0;RPB=0.957727;SGB=32.5467;VDB=0.415179;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.7:9287618 chr07:009287618 0 W/9287618-9287618 FN4179-S SNP T -> A AC=1;AN=170;BQB=0.911787;DP=2293;DP4=1007,1185,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.06074e-08;MQSB=0.971042;RPB=0.986204;SGB=56.7575;VDB=0.33346;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN-81 Single Base Substitution C-T INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1336-S.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN1336-S Single Base Substitution C-T INTRON HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2374.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN2374 SNP C -> T AC=2;AN=192;BQB=0.946777;DP=5301;DP4=2525,2386,22,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.121e-24;MQSB=0.952236;RPB=0.750678;SGB=100.716;VDB=0.186918;EFF=INTRON(MODIFIER||||330|LOC_Os07g15970|protein_coding|CODING|LOC_Os07g15970.1|8|1) FN2451.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN2451 SNP C -> T AC=2;AN=200;BQB=0.99021;DP=5001;DP4=2437,2192,36,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.3181e-32;MQSB=0.990877;RPB=0.868687;SGB=-122.473;VDB=0.161442;EFF=INTRON(MODIFIER||||330|LOC_Os07g15970|protein_coding|CODING|LOC_Os07g15970.1|8|1) FN3505-S.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN3505-S SNP C -> T AC=2;AN=188;BQB=0.991578;DP=2804;DP4=1339,1391,9,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07411e-08;MQSB=0.972479;RPB=0.858937;SGB=53.5223;VDB=0.383233;EFF=INTRON(MODIFIER||||330|LOC_Os07g15970|protein_coding|CODING|LOC_Os07g15970.1|8|1) FN3713-S.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN3713-S SNP C -> T AC=2;AN=190;BQB=0.482235;DP=3176;DP4=1480,1562,15,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.49515e-17;MQSB=0.84009;RPB=0.820474;SGB=114.286;VDB=0.705055;EFF=INTRON(MODIFIER||||330|LOC_Os07g15970|protein_coding|CODING|LOC_Os07g15970.1|8|1) FN466-S.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN466-S Single Base Substitution C-T INTRON HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN914-S.SNP.7:9300138 chr07:009300138 0 W/9300138-9300138 FN914-S Single Base Substitution C-T INTRON HOMO SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3610-S.SNP.7:9302815 chr07:009302815 0 W/9302815-9302815 FN3610-S SNP G -> A AC=2;AN=190;BQB=0.999837;DP=2646;DP4=1266,1276,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.94258e-15;MQSB=0.478361;RPB=0.948099;SGB=108.296;VDB=0.951801;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.7:9303112 chr07:009303112 0 W/9303112-9303112 FN2471 SNP A -> T AC=1;AN=200;BQB=0.900981;DP=4650;DP4=2409,1851,20,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02521e-14;MQSB=0.877854;RPB=0.992559;SGB=65.9573;VDB=0.650961;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.7:9303724 chr07:009303724 0 W/9303724-9303724 FN478-S Single Base Substitution G-A INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2556-S.SNP.7:9313383 chr07:009313383 0 W/9313383-9313383 FN2556-S SNP A -> T AC=2;AN=198;BQB=0.729336;DP=4184;DP4=2160,1760,26,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.49977e-29;MQSB=0.986978;RPB=0.421365;SGB=112.388;VDB=0.0608876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.7:9314642 chr07:009314642 0 W/9314642-9314642 FN2103-S SNP G -> C AC=1;AN=168;BQB=0.299734;DP=3637;DP4=1953,1651,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.39246e-09;MQSB=0.959599;RPB=0.572786;SGB=-14.0801;VDB=0.855328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.7:9316660 chr07:009316660 0 W/9316660-9316660 FN1196-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN792-S.SNP.7:9320562 chr07:009320562 0 W/9320562-9320562 FN792-S Single Base Substitution T-A INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2282.SNP.7:9323548 chr07:009323548 0 W/9323548-9323548 FN2282 SNP G -> A AC=1;AN=192;BQB=0.986593;DP=4811;DP4=2305,2118,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207857;MQB=1.38838e-10;MQSB=0.822666;RPB=0.0569857;SGB=-9.68954;VDB=0.424096;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T919|1630|LOC_Os07g16000|protein_coding|CODING|LOC_Os07g16000.1|5|1) FN319-S.SNP.7:9325050 chr07:009325050 0 W/9325050-9325050 FN319-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2589-S.SNP.7:9330879 chr07:009330879 0 W/9330879-9330879 FN2589-S SNP T -> G AC=1;AN=198;BQB=0.855185;DP=4224;DP4=2138,1855,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00213068;MQB=9.56764e-05;MQSB=0.515264;RPB=0.958366;SGB=47.3393;VDB=0.242712;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.7:9334975 chr07:009334975 0 W/9334975-9334975 FN1697-S SNP T -> C AC=1;AN=188;BQB=0.221144;DP=3302;DP4=1468,1806,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.61533e-06;MQSB=0.705193;RPB=0.995928;SGB=0.908326;VDB=0.39866;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.7:9336963 chr07:009336963 0 W/9336963-9336963 FN4229-S SNP G -> A AC=2;AN=170;BQB=0.66186;DP=2168;DP4=1022,1067,18,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.75116e-15;MQSB=0.910751;RPB=0.843836;SGB=56.5237;VDB=0.577228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN-262 Single Base Substitution C-T INTERGENIC HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-288.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN-288 Single Base Substitution C-T INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-82.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN-82 Single Base Substitution C-T INTERGENIC HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1140-S.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN1140-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1280-S.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN1280-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN437-S.SNP.7:9342439 chr07:009342439 0 W/9342439-9342439 FN437-S Single Base Substitution C-T INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN1468-S.SNP.7:9343932 chr07:009343932 0 W/9343932-9343932 FN1468-S Single Base Substitution C-T INTERGENIC Homo SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1184-S.SNP.7:9345401 chr07:009345401 0 W/9345401-9345401 FN1184-S Single Base Substitution A-G INTRON HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN-137.SNP.7:9360913 chr07:009360913 0 W/9360913-9360913 FN-137 Single Base Substitution G-A INTRON HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3345-S.SNP.7:9369962 chr07:009369962 0 W/9369962-9369962 FN3345-S SNP T -> A AC=1;AN=184;BQB=0.510997;DP=3853;DP4=2133,1537,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.625e-07;MQSB=0.998536;RPB=0.610679;SGB=46.3132;VDB=0.724306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I79N|599|LOC_Os07g16070|protein_coding|CODING|LOC_Os07g16070.1|3|1) FN783-S.SNP.7:9371602 chr07:009371602 0 W/9371602-9371602 FN783-S Single Base Substitution C-T INTRON HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN-148.SNP.7:9371922 chr07:009371922 0 W/9371922-9371922 FN-148 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g16070 retrotransposon protein, putative, unclassified, expressed SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN1713-S.SNP.7:9373592 chr07:009373592 0 W/9373592-9373592 FN1713-S SNP A -> C AC=2;AN=188;BQB=0.942968;DP=2684;DP4=1341,1283,20,16;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000372578;MQB=1.31131e-05;MQSB=0.281183;RPB=0.997325;SGB=36.4041;VDB=0.293595;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.7:9381750 chr07:009381750 0 W/9381750-9381750 FN942-S Single Base Substitution A-G INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN4240-S.SNP.7:9383392 chr07:009383392 0 W/9383392-9383392 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.709931;DP=2603;DP4=1229,1270,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.85874e-06;MQSB=0.979132;RPB=0.861305;SGB=7.67082;VDB=0.224157;EFF=INTRON(MODIFIER||||144|LOC_Os07g16100|protein_coding|CODING|LOC_Os07g16100.1|1|1) FN1545-S.SNP.7:9383842 chr07:009383842 0 W/9383842-9383842 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1545-S.SNP.7:9384462 chr07:009384462 0 W/9384462-9384462 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN552-S.SNP.7:9385948 chr07:009385948 0 W/9385948-9385948 FN552-S Single Base Substitution G-A INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN780-S.SNP.7:9387377 chr07:009387377 0 W/9387377-9387377 FN780-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g16120 retrotransposon protein, putative, unclassified, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN4009-S.SNP.7:9391079 chr07:009391079 0 W/9391079-9391079 FN4009-S SNP T -> A AC=1;AN=168;BQB=0.998821;DP=2850;DP4=1398,1259,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53428e-09;MQSB=0.971738;RPB=0.35443;SGB=31.908;VDB=0.127231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N544Y|1578|LOC_Os07g16120|protein_coding|CODING|LOC_Os07g16120.1|3|1) FN3829-S.SNP.7:9391883 chr07:009391883 0 W/9391883-9391883 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.957355;DP=2854;DP4=1325,1362,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66805e-11;MQSB=0.99886;RPB=0.68838;SGB=53.8699;VDB=0.09064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G355S|1578|LOC_Os07g16120|protein_coding|CODING|LOC_Os07g16120.1|2|1) FN3445-S.SNP.7:9398777 chr07:009398777 0 W/9398777-9398777 FN3445-S SNP A -> G AC=2;AN=184;BQB=0.916712;DP=3343;DP4=1424,1753,10,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.87825e-09;MQSB=0.987811;RPB=0.966652;SGB=-15.2358;VDB=0.900864;EFF=INTERGENIC(MODIFIER||||||||||1) FN935-S.SNP.7:9405576 chr07:009405576 0 W/9405576-9405576 FN935-S Single Base Substitution G-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. W42-1-3S-1.SNP.7:9410592 chr07:009410592 0 W/9410592-9410592 W42-1-3S-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN672-S.SNP.7:9413272 chr07:009413272 0 W/9413272-9413272 FN672-S Single Base Substitution C-T INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN672-S.SNP.7:9413274 chr07:009413274 0 W/9413274-9413274 FN672-S Single Base Substitution G-C INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2630-S.SNP.7:9417471 chr07:009417471 0 W/9417471-9417471 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.974014;DP=5006;DP4=2279,2411,17,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01295e-22;MQSB=0.998281;RPB=0.299065;SGB=-44.3966;VDB=0.0624066;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.7:9424123 chr07:009424123 0 W/9424123-9424123 FN3491-S SNP C -> T AC=1;AN=188;BQB=0.808895;DP=2651;DP4=1426,1164,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.78829e-10;MQSB=0.998051;RPB=0.864799;SGB=53.7007;VDB=0.107453;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.7:9426261 chr07:009426261 0 W/9426261-9426261 FN1015-S Single Base Substitution C-T INTRON HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3779-S.SNP.7:9430145 chr07:009430145 0 W/9430145-9430145 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.999582;DP=2662;DP4=1075,1425,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.96498e-08;MQSB=0.00773234;RPB=0.57248;SGB=36.1006;VDB=0.139304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.7:9431632 chr07:009431632 0 W/9431632-9431632 FN2426 SNP T -> C AC=1;AN=200;BQB=0.72797;DP=3810;DP4=2093,1440,20,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86232e-17;MQSB=0.913665;RPB=0.383908;SGB=76.378;VDB=0.968446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.7:9440465 chr07:009440465 0 W/9440465-9440465 FN3966-S SNP G -> T AC=1;AN=168;BQB=0.468133;DP=2624;DP4=1197,1331,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74352e-07;MQSB=0.422151;RPB=0.606193;SGB=51.902;VDB=0.790712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.7:9440791 chr07:009440791 0 W/9440791-9440791 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.826071;DP=5240;DP4=2754,2231,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.87165e-10;MQSB=0.842758;RPB=0.959417;SGB=72.6852;VDB=0.466821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.7:9444354 chr07:009444354 0 W/9444354-9444354 FN1619-S Single Base Substitution C-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2493.SNP.7:9445342 chr07:009445342 0 W/9445342-9445342 FN2493 SNP G -> T AC=2;AN=200;BQB=0.0889727;DP=5409;DP4=2702,2359,27,15;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=5.05536e-12;MQSB=0.495286;RPB=0.800284;SGB=48.014;VDB=0.878644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.7:9453152 chr07:009453152 0 W/9453152-9453152 FN3524-S SNP T -> C AC=1;AN=188;BQB=0.999722;DP=2716;DP4=1367,1275,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39551e-08;MQSB=0.427946;RPB=0.99527;SGB=53.5223;VDB=0.866378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.7:9460137 chr07:009460137 0 W/9460137-9460137 FN3445-S SNP A -> G AC=1;AN=184;BQB=0.611565;DP=2634;DP4=1305,1265,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.45797e-05;MQSB=0.953573;RPB=0.899754;SGB=21.6609;VDB=0.618905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.7:9463601 chr07:009463601 0 W/9463601-9463601 FN3551-S SNP T -> G AC=1;AN=188;BQB=0.996921;DP=4047;DP4=2020,1826,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44796e-10;MQSB=0.766557;RPB=0.94691;SGB=60.7873;VDB=0.485729;EFF=INTRON(MODIFIER||||363|LOC_Os07g16224|protein_coding|CODING|LOC_Os07g16224.1|5|1) FN2749-S.SNP.7:9465809 chr07:009465809 0 W/9465809-9465809 FN2749-S SNP A -> G AC=1;AN=200;BQB=0.985529;DP=4823;DP4=2450,2203,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39844e-09;MQSB=0.999801;RPB=0.991506;SGB=58.8698;VDB=0.118456;EFF=INTRON(MODIFIER||||363|LOC_Os07g16224|protein_coding|CODING|LOC_Os07g16224.1|5|1) FN2749-S.SNP.7:9465810 chr07:009465810 0 W/9465810-9465810 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.9181;DP=4795;DP4=2399,2173,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35607e-09;MQSB=0.999798;RPB=0.968021;SGB=47.4799;VDB=0.038453;EFF=INTRON(MODIFIER||||363|LOC_Os07g16224|protein_coding|CODING|LOC_Os07g16224.1|5|1) FN4174-S.SNP.7:9466991 chr07:009466991 0 W/9466991-9466991 FN4174-S SNP A -> T AC=1;AN=168;BQB=0.9558;DP=2336;DP4=1205,1026,1,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.9788e-07;MQSB=0.998874;RPB=0.554761;SGB=12.556;VDB=0.0688527;EFF=INTRON(MODIFIER||||363|LOC_Os07g16224|protein_coding|CODING|LOC_Os07g16224.1|3|1) FN755-S.SNP.7:9474646 chr07:009474646 0 W/9474646-9474646 FN755-S Single Base Substitution C-T INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2218-S.SNP.7:9481352 chr07:009481352 0 W/9481352-9481352 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.887474;DP=4680;DP4=2135,2222,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0314103;MQB=0.955964;MQSB=0.27346;RPB=0.261564;SGB=19.6499;VDB=0.745401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.7:9487130 chr07:009487130 0 W/9487130-9487130 FN1553-S Single Base Substitution T-G INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN1000-S.SNP.7:9492681 chr07:009492681 0 W/9492681-9492681 FN1000-S Single Base Substitution C-T INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-350.SNP.7:9493257 chr07:009493257 0 W/9493257-9493257 FN-350 Single Base Substitution T-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2291.SNP.7:9493787 chr07:009493787 0 W/9493787-9493787 FN2291 SNP A -> T AC=1;AN=192;BQB=0.799463;DP=4748;DP4=2424,2036,24,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000210615;MQB=2.00556e-22;MQSB=0.999902;RPB=0.540352;SGB=172.448;VDB=0.0232298;EFF=INTRON(MODIFIER||||71|LOC_Os07g16270|protein_coding|CODING|LOC_Os07g16270.1|1|1) FN4201-S.SNP.7:9493790 chr07:009493790 0 W/9493790-9493790 FN4201-S SNP C -> A AC=1;AN=168;BQB=0.55838;DP=2258;DP4=1161,1027,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00044287;MQB=2.16342e-07;MQSB=0.971032;RPB=0.995993;SGB=61.2001;VDB=0.628248;EFF=INTRON(MODIFIER||||71|LOC_Os07g16270|protein_coding|CODING|LOC_Os07g16270.1|1|1) FN2781-S.SNP.7:9497139 chr07:009497139 0 W/9497139-9497139 FN2781-S SNP C -> A AC=1;AN=198;BQB=0.969251;DP=4165;DP4=1937,2003,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.94003e-09;MQSB=0.960321;RPB=0.798221;SGB=67.9293;VDB=0.839413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.7:9501420 chr07:009501420 0 W/9501420-9501420 FN3705-S SNP G -> A AC=2;AN=190;BQB=0.94366;DP=2302;DP4=1001,1126,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.88648e-14;MQSB=0.72216;RPB=0.710412;SGB=89.4087;VDB=0.12878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.7:9507318 chr07:009507318 0 W/9507318-9507318 FN-287 Single Base Substitution C-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN479-S.SNP.7:9512881 chr07:009512881 0 W/9512881-9512881 FN479-S Single Base Substitution T-C INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN536-S.SNP.7:9520781 chr07:009520781 0 W/9520781-9520781 FN536-S Single Base Substitution T-A INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.7:9520781 chr07:009520781 0 W/9520781-9520781 FN727-S Single Base Substitution T-A INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN2260-S.SNP.7:9521498 chr07:009521498 0 W/9521498-9521498 FN2260-S SNP C -> A AC=2;AN=190;BQB=0.633465;DP=5538;DP4=2640,2519,42,45;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.09179e-43;MQSB=0.911958;RPB=0.403734;SGB=240.96;VDB=0.537954;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.7:9531822 chr07:009531822 0 W/9531822-9531822 FN1446-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2438.SNP.7:9533505 chr07:009533505 0 W/9533505-9533505 FN2438 SNP C -> A AC=1;AN=200;BQB=0.995774;DP=3903;DP4=1745,1916,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44671e-17;MQSB=0.890579;RPB=0.970318;SGB=132.552;VDB=0.601245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.7:9533507 chr07:009533507 0 W/9533507-9533507 FN2438 SNP C -> T AC=1;AN=200;BQB=0.999229;DP=3955;DP4=1762,1975,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24951e-17;MQSB=0.871895;RPB=0.995595;SGB=132.552;VDB=0.646492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.7:9533549 chr07:009533549 0 W/9533549-9533549 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.428951;DP=2674;DP4=1381,1180,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000423086;MQSB=0.0370039;RPB=0.854365;SGB=43.2083;VDB=0.54469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.7:9541200 chr07:009541200 0 W/9541200-9541200 FN2648-S SNP G -> T AC=1;AN=200;BQB=0.940079;DP=5168;DP4=2310,2557,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87844e-12;MQSB=0.883362;RPB=0.0600782;SGB=65.5058;VDB=0.12176;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.7:9542651 chr07:009542651 0 W/9542651-9542651 FN3858-S SNP A -> G AC=1;AN=158;BQB=0.969831;DP=2262;DP4=991,1116,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.181e-12;MQSB=0.990182;RPB=0.975226;SGB=38.0354;VDB=0.232648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.7:9543968 chr07:009543968 0 W/9543968-9543968 FN1221-S Single Base Substitution A-C INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3794-S.SNP.7:9547011 chr07:009547011 0 W/9547011-9547011 FN3794-S SNP A -> T AC=2;AN=190;BQB=0.487021;DP=3291;DP4=1404,1675,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000911577;MQB=7.14625e-11;MQSB=0.852489;RPB=0.976119;SGB=-7.68321;VDB=0.730568;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.7:9548849 chr07:009548849 0 W/9548849-9548849 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1532-S.SNP.7:9552362 chr07:009552362 0 W/9552362-9552362 FN1532-S Single Base Substitution C-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3795-S.SNP.7:9553575 chr07:009553575 0 W/9553575-9553575 FN3795-S SNP T -> G AC=1;AN=190;BQB=0.990699;DP=2819;DP4=1606,1075,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.14709e-07;MQSB=0.381448;RPB=0.994749;SGB=62.7569;VDB=0.663763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.7:9555140 chr07:009555140 0 W/9555140-9555140 FN3385-S SNP T -> A AC=1;AN=184;BQB=0.888474;DP=3390;DP4=1507,1719,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0831858;MQB=0.992487;MQSB=0;RPB=0.91607;SGB=32.2261;VDB=0.531414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.7:9556906 chr07:009556906 0 W/9556906-9556906 FN1490-S Single Base Substitution A-G INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2589-S.SNP.7:9557866 chr07:009557866 0 W/9557866-9557866 FN2589-S SNP C -> G AC=1;AN=198;BQB=0.232128;DP=5226;DP4=1855,3015,13,36;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0593188;MQB=1.97673e-08;MQSB=4.97699e-17;RPB=1.93636e-05;SGB=-1227.36;VDB=0.0234453;EFF=INTRON(MODIFIER||||434|LOC_Os07g16360|protein_coding|CODING|LOC_Os07g16360.1|1|1) FN1473-S.SNP.7:9560290 chr07:009560290 0 W/9560290-9560290 FN1473-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN3681-S.SNP.7:9564165 chr07:009564165 0 W/9564165-9564165 FN3681-S SNP T -> A AC=1;AN=190;BQB=0.903673;DP=2709;DP4=1245,1400,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43051e-07;MQSB=0.0819552;RPB=0.040047;SGB=58.2031;VDB=0.464601;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.7:9579090 chr07:009579090 0 W/9579090-9579090 FN487-S Single Base Substitution G-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2200-S.SNP.7:9580340 chr07:009580340 0 W/9580340-9580340 FN2200-S SNP G -> A AC=1;AN=190;BQB=2.57972e-17;DP=5125;DP4=2518,1704,14,57;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00448781;MQB=5.75523e-07;MQSB=2.48748e-05;RPB=0.566844;SGB=-1034.15;VDB=3.31923e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.7:9592002 chr07:009592002 0 W/9592002-9592002 FN1521-S Single Base Substitution G-T INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN662-S.SNP.7:9592391 chr07:009592391 0 W/9592391-9592391 FN662-S Single Base Substitution C-G INTRON HOMO SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN938-S.SNP.7:9592662 chr07:009592662 0 W/9592662-9592662 FN938-S Single Base Substitution G-A INTRON HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1048-S.SNP.7:9598076 chr07:009598076 0 W/9598076-9598076 FN1048-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3398-S.SNP.7:9599696 chr07:009599696 0 W/9599696-9599696 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.388458;DP=3079;DP4=1540,1459,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0224099;MQB=0.00419711;MQSB=6.89469e-12;RPB=0.461584;SGB=44.2207;VDB=0.0325049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1314K|1866|LOC_Os07g16400|protein_coding|CODING|LOC_Os07g16400.1|8|1) FN3539-S.SNP.7:9603777 chr07:009603777 0 W/9603777-9603777 FN3539-S SNP A -> T AC=1;AN=188;BQB=0.0508245;DP=2913;DP4=1387,1287,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0391349;MQB=0.483132;MQSB=0.981212;RPB=0.00953819;SGB=-17.7162;VDB=0.135767;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.7:9605013 chr07:009605013 0 W/9605013-9605013 FN1315-S Single Base Substitution C-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN4117-S.SNP.7:9612538 chr07:009612538 0 W/9612538-9612538 FN4117-S SNP A -> T AC=2;AN=182;BQB=0.999957;DP=3022;DP4=1490,1451,14,16;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.00860357;MQB=1.50864e-12;MQSB=0.103663;RPB=0.615168;SGB=95.3123;VDB=0.0254174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.7:9619951 chr07:009619951 0 W/9619951-9619951 FN1613-S Single Base Substitution T-C INTRON HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN-175.SNP.7:9624352 chr07:009624352 0 W/9624352-9624352 FN-175 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g16430 retrotransposon protein, putative, unclassified, expressed SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1721-S.SNP.7:9625297 chr07:009625297 0 W/9625297-9625297 FN1721-S SNP T -> A AC=2;AN=188;BQB=0.435945;DP=1457;DP4=670,748,7,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3287e-08;MQSB=0.77496;RPB=0.259335;SGB=32.8736;VDB=0.511338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S406C|629|LOC_Os07g16430|protein_coding|CODING|LOC_Os07g16430.1|4|1) FN2296.SNP.7:9633036 chr07:009633036 0 W/9633036-9633036 FN2296 SNP C -> T AC=2;AN=192;BQB=0.243623;DP=4960;DP4=2505,2126,27,26;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00362903;MQB=4.48006e-20;MQSB=0.0247097;RPB=0.970076;SGB=63.6713;VDB=0.892975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.7:9633369 chr07:009633369 0 W/9633369-9633369 FN3947-S SNP G -> A AC=1;AN=168;BQB=0.988157;DP=2541;DP4=1413,1011,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00314837;MQB=7.74673e-07;MQSB=0.855077;RPB=0.997235;SGB=27.0464;VDB=0.725376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T171M|193|LOC_Os07g16450|protein_coding|CODING|LOC_Os07g16450.1|2|1) FN2547-S.SNP.7:9635403 chr07:009635403 0 W/9635403-9635403 FN2547-S SNP C -> A AC=1;AN=186;BQB=0.807642;DP=3390;DP4=1701,1449,4,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.000201813;MQSB=0.605816;RPB=0.961464;SGB=35.7638;VDB=0.296895;EFF=INTRON(MODIFIER||||193|LOC_Os07g16450|protein_coding|CODING|LOC_Os07g16450.1|1|1) FN2582-S.SNP.7:9637318 chr07:009637318 0 W/9637318-9637318 FN2582-S SNP T -> C AC=1;AN=196;BQB=0.922106;DP=3610;DP4=1549,1886,5,3;HOB=5.20616e-05;ICB=0.000104654;MQ=32;MQ0F=0.13518;MQB=0.927637;MQSB=0;RPB=0.943419;SGB=31.1689;VDB=0.188618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.7:9640857 chr07:009640857 0 W/9640857-9640857 FN2450 SNP G -> A AC=2;AN=200;BQB=0.917007;DP=2844;DP4=1572,1045,10,9;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.99099e-07;MQSB=2.73577e-05;RPB=0.825674;SGB=81.8956;VDB=0.381035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.7:9642688 chr07:009642688 0 W/9642688-9642688 FN1120-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g16460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1492-S.SNP.7:9643610 chr07:009643610 0 W/9643610-9643610 FN1492-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2535-S.SNP.7:9645562 chr07:009645562 0 W/9645562-9645562 FN2535-S SNP T -> A AC=1;AN=198;BQB=0.915799;DP=3518;DP4=1647,1515,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00511654;MQB=1.82913e-09;MQSB=0.998343;RPB=0.62946;SGB=-14.4309;VDB=0.22877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D177V|1309|LOC_Os07g16460|protein_coding|CODING|LOC_Os07g16460.1|1|1) FN2535-S.SNP.7:9645563 chr07:009645563 0 W/9645563-9645563 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.987307;DP=3527;DP4=1677,1670,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00510349;MQB=9.64078e-08;MQSB=0.967172;RPB=0.667381;SGB=36.5539;VDB=0.274793;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D177N|1309|LOC_Os07g16460|protein_coding|CODING|LOC_Os07g16460.1|1|1) FN1532-S.SNP.7:9649965 chr07:009649965 0 W/9649965-9649965 FN1532-S Single Base Substitution C-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1293-S.SNP.7:9652891 chr07:009652891 0 W/9652891-9652891 FN1293-S Single Base Substitution A-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1635-S.SNP.7:9654982 chr07:009654982 0 W/9654982-9654982 FN1635-S SNP A -> T AC=1;AN=188;BQB=0.0908211;DP=3985;DP4=1908,2038,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00326223;MQB=0.0244614;MQSB=0.931897;RPB=0.55074;SGB=-67.7293;VDB=0.227337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.7:9655212 chr07:009655212 0 W/9655212-9655212 FN2259-S SNP A -> C AC=1;AN=190;BQB=0.945273;DP=5186;DP4=2484,2361,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000385654;MQB=1.40048e-12;MQSB=0.890859;RPB=0.96685;SGB=44.0907;VDB=0.32489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.7:9656252 chr07:009656252 0 W/9656252-9656252 FN3363-S SNP T -> C AC=1;AN=184;BQB=0.734014;DP=3182;DP4=1483,1587,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00597109;MQB=6.76421e-05;MQSB=2.19836e-17;RPB=0.408293;SGB=35.884;VDB=0.609669;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.7:9656753 chr07:009656753 0 W/9656753-9656753 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.97177;DP=3913;DP4=2026,1807,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0937899;MQB=0.786704;MQSB=0.331549;RPB=0.899296;SGB=34.878;VDB=0.312311;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P51|1882|LOC_Os07g16480|protein_coding|CODING|LOC_Os07g16480.1|1|1) FN1477-S.SNP.7:9663993 chr07:009663993 0 W/9663993-9663993 FN1477-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g16490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2554-S.SNP.7:9664534 chr07:009664534 0 W/9664534-9664534 FN2554-S SNP C -> A AC=1;AN=188;BQB=0.999877;DP=3691;DP4=1530,1999,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00216743;MQB=3.08304e-10;MQSB=0.912748;RPB=0.60782;SGB=39.7248;VDB=0.128416;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P406|776|LOC_Os07g16490|protein_coding|CODING|LOC_Os07g16490.1|3|1) FN1163-S.SNP.7:9666345 chr07:009666345 0 W/9666345-9666345 FN1163-S Single Base Substitution A-C INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN893-S.SNP.7:9668637 chr07:009668637 0 W/9668637-9668637 FN893-S Single Base Substitution C-T INTERGENIC HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1094-S.SNP.7:9669552 chr07:009669552 0 W/9669552-9669552 FN1094-S Single Base Substitution C-T INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2600-S.SNP.7:9672407 chr07:009672407 0 W/9672407-9672407 FN2600-S SNP C -> T AC=1;AN=186;BQB=0.938198;DP=3355;DP4=1519,1634,11,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.80445e-10;MQSB=0.906808;RPB=0.994905;SGB=9.3494;VDB=0.595453;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.7:9676721 chr07:009676721 0 W/9676721-9676721 FN4050-S SNP T -> C AC=2;AN=168;BQB=0.462954;DP=3266;DP4=1554,1573,26,18;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=2.87827e-10;MQSB=0.453662;RPB=0.759943;SGB=189.528;VDB=0.661907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K394E|591|LOC_Os07g16510|protein_coding|CODING|LOC_Os07g16510.1|3|1) FN1436-S.SNP.7:9677332 chr07:009677332 0 W/9677332-9677332 FN1436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g16510 retrotransposon, putative, centromere-specific, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2216-S.SNP.7:9677332 chr07:009677332 0 W/9677332-9677332 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.674141;DP=4671;DP4=2235,2070,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.75737e-15;MQSB=0.675318;RPB=0.397121;SGB=21.2038;VDB=0.110573;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P190L|591|LOC_Os07g16510|protein_coding|CODING|LOC_Os07g16510.1|3|1) FN347-S.SNP.7:9682502 chr07:009682502 0 W/9682502-9682502 FN347-S Single Base Substitution G-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN807-S.SNP.7:9682906 chr07:009682906 0 W/9682906-9682906 FN807-S Single Base Substitution G-T INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2620-S.SNP.7:9683885 chr07:009683885 0 W/9683885-9683885 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.93831;DP=5787;DP4=2797,2676,24,27;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.136167;MQB=0.00349068;MQSB=0.0014411;RPB=0.287439;SGB=117.578;VDB=0.988368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W869C|1116|LOC_Os07g16520|protein_coding|CODING|LOC_Os07g16520.1|3|1) FN4181-S.SNP.7:9684137 chr07:009684137 0 W/9684137-9684137 FN4181-S SNP G -> A AC=1;AN=170;BQB=0.534426;DP=2617;DP4=1230,1299,8,19;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0328621;MQB=5.46027e-08;MQSB=0.00458633;RPB=0.152977;SGB=-231.292;VDB=0.828927;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T785|1116|LOC_Os07g16520|protein_coding|CODING|LOC_Os07g16520.1|3|1) FN1240-S.SNP.7:9684188 chr07:009684188 0 W/9684188-9684188 FN1240-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2360.SNP.7:9694194 chr07:009694194 0 W/9694194-9694194 FN2360 SNP C -> T AC=1;AN=192;BQB=0.0762048;DP=4816;DP4=2226,2095,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.76013e-15;MQSB=0.953841;RPB=0.753553;SGB=-110.545;VDB=0.696644;EFF=INTRON(MODIFIER||||645|LOC_Os07g16530|protein_coding|CODING|LOC_Os07g16530.1|4|1) FN2629-S.SNP.7:9704315 chr07:009704315 0 W/9704315-9704315 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.569059;DP=6205;DP4=3251,2614,16,14;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.035133;MQB=0.0377541;MQSB=0;RPB=0.711341;SGB=28.752;VDB=0.0400391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.7:9706624 chr07:009706624 0 W/9706624-9706624 FN2407 SNP C -> T AC=1;AN=200;BQB=0.991042;DP=4759;DP4=2272,2267,9,15;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000210128;MQB=6.73287e-07;MQSB=4.78202e-06;RPB=0.977394;SGB=76.3213;VDB=0.0190095;EFF=INTRON(MODIFIER||||84|LOC_Os07g16550|protein_coding|CODING|LOC_Os07g16550.1|1|1) FN3824-S.SNP.7:9710645 chr07:009710645 0 W/9710645-9710645 FN3824-S SNP T -> C AC=1;AN=190;BQB=0.97772;DP=3087;DP4=1377,1531,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00388727;MQB=9.72426e-07;MQSB=0.448665;RPB=0.945024;SGB=58.2031;VDB=0.150509;EFF=INTRON(MODIFIER||||1722|LOC_Os07g16560|protein_coding|CODING|LOC_Os07g16560.1|3|1) FN_N1-119-1.SNP.7:9710951 chr07:009710951 0 W/9710951-9710951 FN_N1-119-1 Single Base Substitution T-C HET LOC_Os07g16560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3964-S.SNP.7:9714029 chr07:009714029 0 W/9714029-9714029 FN3964-S SNP G -> T AC=2;AN=168;BQB=0.875396;DP=2675;DP4=1168,1402,9,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.0011215;MQB=1.57273e-13;MQSB=0.808747;RPB=0.919161;SGB=127.497;VDB=0.666923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L397I|1722|LOC_Os07g16560|protein_coding|CODING|LOC_Os07g16560.1|3|1) FN443-S.SNP.7:9720622 chr07:009720622 0 W/9720622-9720622 FN443-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g16570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3434-S.SNP.7:9721491 chr07:009721491 0 W/9721491-9721491 FN3434-S SNP C -> A AC=1;AN=184;BQB=0.935861;DP=2657;DP4=1272,1321,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00451637;MQB=1.25861e-05;MQSB=0.248853;RPB=0.456154;SGB=32.2261;VDB=0.457614;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V88|286|LOC_Os07g16580|protein_coding|CODING|LOC_Os07g16580.1|3|1) FN3434-S.SNP.7:9721492 chr07:009721492 0 W/9721492-9721492 FN3434-S SNP A -> G AC=1;AN=184;BQB=0.999845;DP=2660;DP4=1273,1269,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00451128;MQB=1.5669e-05;MQSB=0.0939431;RPB=0.630391;SGB=44.2207;VDB=0.528324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V88A|286|LOC_Os07g16580|protein_coding|CODING|LOC_Os07g16580.1|3|1) FN2691-S.SNP.7:9725195 chr07:009725195 0 W/9725195-9725195 FN2691-S SNP G -> A AC=2;AN=200;BQB=0.99597;DP=4941;DP4=2454,2086,35,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.60222e-28;MQSB=0.921279;RPB=0.892753;SGB=115.456;VDB=0.363672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.7:9728825 chr07:009728825 0 W/9728825-9728825 FN1531-S Single Base Substitution T-C INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1366-S.SNP.7:9730111 chr07:009730111 0 W/9730111-9730111 FN1366-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g16590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2200-S.SNP.7:9730275 chr07:009730275 0 W/9730275-9730275 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.980912;DP=5094;DP4=2291,2525,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00235571;MQB=9.71893e-06;MQSB=0.0552091;RPB=0.207463;SGB=28.7675;VDB=0.462835;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1656|1717|LOC_Os07g16590|protein_coding|CODING|LOC_Os07g16590.1|3|1) FN1062-S.SNP.7:9731159 chr07:009731159 0 W/9731159-9731159 FN1062-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g16590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1339-S.SNP.7:9731790 chr07:009731790 0 W/9731790-9731790 FN1339-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2376.SNP.7:9742697 chr07:009742697 0 W/9742697-9742697 FN2376 SNP G -> A AC=1;AN=192;BQB=0.762926;DP=4947;DP4=2511,2038,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.51713e-06;MQSB=0.997445;RPB=0.997074;SGB=18.6565;VDB=0.810519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.7:9743586 chr07:009743586 0 W/9743586-9743586 FN3834-S SNP G -> C AC=2;AN=190;BQB=0.895358;DP=2728;DP4=1355,1282,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000733138;MQB=2.49545e-09;MQSB=0.566258;RPB=0.970703;SGB=85.5263;VDB=0.969249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S376C|401|LOC_Os07g16610|protein_coding|CODING|LOC_Os07g16610.1|3|1) FN2550-S.SNP.7:9745912 chr07:009745912 0 W/9745912-9745912 FN2550-S SNP A -> G AC=1;AN=192;BQB=0.985423;DP=4130;DP4=2028,1946,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00968523;MQB=0.00390358;MQSB=1.7844e-25;RPB=0.637462;SGB=21.559;VDB=0.411966;EFF=INTRON(MODIFIER||||401|LOC_Os07g16610|protein_coding|CODING|LOC_Os07g16610.1|1|1) FN-372.SNP.7:9746344 chr07:009746344 0 W/9746344-9746344 FN-372 Single Base Substitution A-G INTRON HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3810-S.SNP.7:9746791 chr07:009746791 0 W/9746791-9746791 FN3810-S SNP A -> T AC=1;AN=190;BQB=0.0354164;DP=2266;DP4=1102,1109,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.080759;MQB=0.792217;MQSB=0.998724;RPB=0.59765;SGB=25.439;VDB=0.851509;EFF=INTRON(MODIFIER||||401|LOC_Os07g16610|protein_coding|CODING|LOC_Os07g16610.1|1|1) FN2297.SNP.7:9750317 chr07:009750317 0 W/9750317-9750317 FN2297 SNP C -> T AC=1;AN=192;BQB=0.798972;DP=4891;DP4=2318,2296,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.5642e-13;MQSB=0.280409;RPB=0.537056;SGB=46.8644;VDB=0.517203;EFF=INTERGENIC(MODIFIER||||||||||1) FN-372.SNP.7:9755340 chr07:009755340 0 W/9755340-9755340 FN-372 Single Base Substitution G-T INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3342-S.SNP.7:9755543 chr07:009755543 0 W/9755543-9755543 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.995525;DP=3103;DP4=1688,1268,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.45071e-10;MQSB=0.998644;RPB=0.777919;SGB=75.8731;VDB=0.72439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.7:9761399 chr07:009761399 0 W/9761399-9761399 FN1339-S Single Base Substitution T-C INTRON HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2387.SNP.7:9765420 chr07:009765420 0 W/9765420-9765420 FN2387 SNP C -> T AC=1;AN=192;BQB=0.118309;DP=4701;DP4=2254,2209,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0567964;MQB=0.778299;MQSB=7.15572e-32;RPB=0.234272;SGB=-13.0756;VDB=0.343125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1368W|1488|LOC_Os07g16630|protein_coding|CODING|LOC_Os07g16630.1|5|1) FN2702-S.SNP.7:9765645 chr07:009765645 0 W/9765645-9765645 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.998615;DP=4720;DP4=2266,2238,14,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00741525;MQB=4.68787e-06;MQSB=0.123734;RPB=0.841638;SGB=54.6902;VDB=0.686789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1443I|1488|LOC_Os07g16630|protein_coding|CODING|LOC_Os07g16630.1|5|1) FN2196-S.SNP.7:9766931 chr07:009766931 0 W/9766931-9766931 FN2196-S SNP C -> T AC=2;AN=190;BQB=0.961453;DP=3523;DP4=1558,1635,31,31;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.020721;MQB=4.83908e-16;MQSB=0.31866;RPB=0.195612;SGB=235.702;VDB=0.873195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.7:9773420 chr07:009773420 0 W/9773420-9773420 FN2264-S SNP G -> A AC=2;AN=190;BQB=0.978888;DP=4562;DP4=2118,2070,13,17;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00438404;MQB=4.26357e-07;MQSB=0.774128;RPB=0.997476;SGB=61.9679;VDB=0.993353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S1382F|1390|LOC_Os07g16650|protein_coding|CODING|LOC_Os07g16650.1|5|1) FN1463-S.SNP.7:9775462 chr07:009775462 0 W/9775462-9775462 FN1463-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g16650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3494-S.SNP.7:9777578 chr07:009777578 0 W/9777578-9777578 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.770344;DP=3041;DP4=1446,1521,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0092075;MQB=0.152025;MQSB=0.330202;RPB=0.611935;SGB=32.2261;VDB=0.622197;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N194|1390|LOC_Os07g16650|protein_coding|CODING|LOC_Os07g16650.1|3|1) FN555-S.SNP.7:9778612 chr07:009778612 0 W/9778612-9778612 FN555-S Single Base Substitution A-G INTRON HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN490-S.SNP.7:9786289 chr07:009786289 0 W/9786289-9786289 FN490-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN1197-S.SNP.7:9792819 chr07:009792819 0 W/9792819-9792819 FN1197-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g16690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN4107-S.SNP.7:9796150 chr07:009796150 0 W/9796150-9796150 FN4107-S SNP C -> A AC=1;AN=182;BQB=0.940106;DP=3309;DP4=1519,1722,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0296162;MQB=0.00198902;MQSB=6.24361e-05;RPB=0.947247;SGB=35.0899;VDB=0.395707;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.7:9797660 chr07:009797660 0 W/9797660-9797660 FN988-S Single Base Substitution T-G INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN895-S.SNP.7:9798988 chr07:009798988 0 W/9798988-9798988 FN895-S Single Base Substitution T-A INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3381-S.SNP.7:9799198 chr07:009799198 0 W/9799198-9799198 FN3381-S SNP C -> T AC=2;AN=184;BQB=0.908773;DP=2995;DP4=1500,1372,15,18;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0033389;MQB=0.112498;MQSB=0.922748;RPB=0.973961;SGB=143.7;VDB=0.612576;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.7:9801555 chr07:009801555 0 W/9801555-9801555 FN3838-S SNP C -> T AC=1;AN=190;BQB=0.97064;DP=3268;DP4=2073,987,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00428397;MQB=3.97022e-05;MQSB=0.999934;RPB=0.996633;SGB=26.2136;VDB=0.57367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.7:9804610 chr07:009804610 0 W/9804610-9804610 FN2254-S SNP C -> T AC=1;AN=190;BQB=0.127679;DP=3279;DP4=1108,1938,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0128088;MQB=3.31884e-05;MQSB=0.244078;RPB=0.523383;SGB=26.2136;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.7:9804660 chr07:009804660 0 W/9804660-9804660 FN1069-S Single Base Substitution G-A INTERGENIC HOMO SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3598-S.SNP.7:9805270 chr07:009805270 0 W/9805270-9805270 FN3598-S SNP C -> T AC=1;AN=188;BQB=0.456194;DP=3839;DP4=1524,2136,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.28998e-09;MQSB=0.0617389;RPB=0.660255;SGB=117.128;VDB=0.552284;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.7:9806669 chr07:009806669 0 W/9806669-9806669 FN1579-S Single Base Substitution G-A INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN4241-S.SNP.7:9809668 chr07:009809668 0 W/9809668-9809668 FN4241-S SNP C -> T AC=1;AN=170;BQB=0.925596;DP=2905;DP4=1351,1477,13,12;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.102238;MQB=0.999709;MQSB=2.80945e-18;RPB=0.57455;SGB=105.627;VDB=0.563319;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.7:9815020 chr07:009815020 0 W/9815020-9815020 FN1003-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1348-S.SNP.7:9820112 chr07:009820112 0 W/9820112-9820112 FN1348-S Single Base Substitution G-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1173-S.SNP.7:9820269 chr07:009820269 0 W/9820269-9820269 FN1173-S Single Base Substitution T-G INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2446.SNP.7:9820976 chr07:009820976 0 W/9820976-9820976 FN2446 SNP T -> A AC=1;AN=200;BQB=0.99836;DP=4434;DP4=2003,2092,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.79963e-14;MQSB=0.892066;RPB=0.470422;SGB=22.3313;VDB=0.752201;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L81*|203|LOC_Os07g16740|protein_coding|CODING|LOC_Os07g16740.1|1|1) FN2572-S.SNP.7:9825007 chr07:009825007 0 W/9825007-9825007 FN2572-S SNP C -> T AC=2;AN=186;BQB=0.894732;DP=3919;DP4=1743,1900,42,40;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=0;MQSB=0.739813;RPB=0.830146;SGB=137.696;VDB=0.774418;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1335Q|1491|LOC_Os07g16750|protein_coding|CODING|LOC_Os07g16750.1|3|1) FN2572-S.SNP.7:9825007 chr07:009825007 0 W/9825007-9825007 FN2572-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g16750 retrotransposon protein, putative, unclassified, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN224-S.SNP.7:9825642 chr07:009825642 0 W/9825642-9825642 FN224-S Single Base Substitution G-A INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN3798-S.SNP.7:9832452 chr07:009832452 0 W/9832452-9832452 FN3798-S SNP A -> T AC=2;AN=190;BQB=0.936272;DP=2913;DP4=1458,1360,20,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.484e-16;MQSB=0.998664;RPB=0.502462;SGB=100.07;VDB=0.202526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.7:9832506 chr07:009832506 0 W/9832506-9832506 FN1673-S SNP A -> T AC=1;AN=188;BQB=0.52471;DP=3207;DP4=1982,1193,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.20409e-09;MQSB=0.260761;RPB=0.677331;SGB=41.3359;VDB=0.967676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.7:9834261 chr07:009834261 0 W/9834261-9834261 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.767207;DP=2484;DP4=1109,1278,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=8.7318e-05;MQSB=0.0157088;RPB=0.805371;SGB=23.9652;VDB=0.556779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.7:9835008 chr07:009835008 0 W/9835008-9835008 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN2667-S.SNP.7:9835937 chr07:009835937 0 W/9835937-9835937 FN2667-S SNP C -> T AC=1;AN=200;BQB=0.958555;DP=5058;DP4=2328,2505,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62788e-07;MQSB=0.996976;RPB=0.790421;SGB=29.4541;VDB=0.00335293;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.7:9848662 chr07:009848662 0 W/9848662-9848662 FN833-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g16780 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN2195-S.SNP.7:9851759 chr07:009851759 0 W/9851759-9851759 FN2195-S SNP C -> G AC=1;AN=190;BQB=0.963447;DP=5570;DP4=2475,2723,11,20;HOB=5.54017e-05;ICB=0.000111386;MQ=12;MQ0F=0.501795;MQB=0.698447;MQSB=6.5759e-39;RPB=0.900489;SGB=-42.1241;VDB=0.0904989;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.7:9853030 chr07:009853030 0 W/9853030-9853030 FN-240 Single Base Substitution C-G INTRON HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN848-S.SNP.7:9855101 chr07:009855101 0 W/9855101-9855101 FN848-S Single Base Substitution C-T INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN848-S.SNP.7:9855108 chr07:009855108 0 W/9855108-9855108 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3947-S.SNP.7:9855254 chr07:009855254 0 W/9855254-9855254 FN3947-S SNP A -> G AC=1;AN=168;BQB=0.925524;DP=2593;DP4=1225,1193,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.58074e-09;MQSB=0.992384;RPB=0.449884;SGB=31.908;VDB=0.0929706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.7:9862856 chr07:009862856 0 W/9862856-9862856 FN-219 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN4206-S.SNP.7:9863225 chr07:009863225 0 W/9863225-9863225 FN4206-S SNP G -> A AC=1;AN=170;BQB=0.910065;DP=2574;DP4=1312,1183,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0034965;MQB=0.00731629;MQSB=0.216619;RPB=0.959147;SGB=47.8722;VDB=0.504569;EFF=INTRON(MODIFIER||||2143|LOC_Os07g16810|protein_coding|CODING|LOC_Os07g16810.1|1|1) FN1688-S.SNP.7:9864602 chr07:009864602 0 W/9864602-9864602 FN1688-S SNP C -> T AC=1;AN=188;BQB=0.456447;DP=3420;DP4=1798,1568,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.06244e-08;MQSB=0.997813;RPB=0.627561;SGB=-91.3539;VDB=0.669869;EFF=INTRON(MODIFIER||||2143|LOC_Os07g16810|protein_coding|CODING|LOC_Os07g16810.1|2|1) FN2540-S.SNP.7:9866506 chr07:009866506 0 W/9866506-9866506 FN2540-S SNP A -> T AC=1;AN=198;BQB=0.680661;DP=4010;DP4=1798,2017,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.25212;MQB=0.844282;MQSB=0;RPB=0.664359;SGB=49.5489;VDB=0.611913;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N234Y|2143|LOC_Os07g16810|protein_coding|CODING|LOC_Os07g16810.1|3|1) FN1630-S.SNP.7:9882076 chr07:009882076 0 W/9882076-9882076 FN1630-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2408.SNP.7:9886105 chr07:009886105 0 W/9886105-9886105 FN2408 SNP T -> C AC=1;AN=200;BQB=0.705424;DP=4864;DP4=2097,2405,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00205592;MQB=4.18564e-07;MQSB=0.659235;RPB=0.753821;SGB=54.6902;VDB=0.104505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.7:9888677 chr07:009888677 0 W/9888677-9888677 FN1067-S Single Base Substitution A-T INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. 704-4-3.SNP.7:9889321 chr07:009889321 0 W/9889321-9889321 704-4-3 Single Base Substitution A-T INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. FN-81.SNP.7:9889332 chr07:009889332 0 W/9889332-9889332 FN-81 Single Base Substitution C-T INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1237-S.SNP.7:9891682 chr07:009891682 0 W/9891682-9891682 FN1237-S Single Base Substitution C-T INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3752-S.SNP.7:9893784 chr07:009893784 0 W/9893784-9893784 FN3752-S SNP G -> C AC=1;AN=190;BQB=0.997919;DP=2649;DP4=1102,1387,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000377501;MQB=0.000254506;MQSB=0.668319;RPB=0.460837;SGB=39.9877;VDB=0.152536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.7:9896984 chr07:009896984 0 W/9896984-9896984 FN2261-S SNP G -> A AC=2;AN=190;BQB=0.983185;DP=3236;DP4=1290,1585,27,43;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.013597;MQB=4.80074e-12;MQSB=4.82287e-07;RPB=0.994518;SGB=307.674;VDB=0.564723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.7:9900503 chr07:009900503 0 W/9900503-9900503 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.972675;DP=2508;DP4=1076,1305,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.102472;MQB=0.867298;MQSB=0.262716;RPB=0.88013;SGB=47.0672;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.7:9903361 chr07:009903361 0 W/9903361-9903361 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.974083;DP=5830;DP4=3235,2412,22,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00634648;MQB=4.08771e-17;MQSB=0.118145;RPB=0.69017;SGB=161.787;VDB=0.868062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P117L|1853|LOC_Os07g16850|protein_coding|CODING|LOC_Os07g16850.1|2|1) FN977-S.SNP.7:9903469 chr07:009903469 0 W/9903469-9903469 FN977-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g16850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN467-S.SNP.7:9903693 chr07:009903693 0 W/9903693-9903693 FN467-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g16850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3556-S.SNP.7:9912692 chr07:009912692 0 W/9912692-9912692 FN3556-S SNP A -> G AC=1;AN=188;BQB=0.995131;DP=5936;DP4=3044,2592,16,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0215633;MQB=0.11559;MQSB=0.210676;RPB=0.938346;SGB=41.3359;VDB=0.728358;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A882|1130|LOC_Os07g16860|protein_coding|CODING|LOC_Os07g16860.1|5|1) FN3577-S.SNP.7:9913519 chr07:009913519 0 W/9913519-9913519 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.755373;DP=6082;DP4=2624,3370,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.20892e-07;MQSB=0.481412;RPB=0.984748;SGB=23.5329;VDB=0.194938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V607I|1130|LOC_Os07g16860|protein_coding|CODING|LOC_Os07g16860.1|5|1) FN1442-S.SNP.7:9914621 chr07:009914621 0 W/9914621-9914621 FN1442-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2378.SNP.7:9918570 chr07:009918570 0 W/9918570-9918570 FN2378 SNP G -> A AC=1;AN=192;BQB=0.608157;DP=9096;DP4=4183,4445,21,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000879507;MQB=2.27589e-13;MQSB=0.351826;RPB=0.882853;SGB=149.626;VDB=0.322409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.7:9925952 chr07:009925952 0 W/9925952-9925952 FN2432 SNP C -> T AC=1;AN=200;BQB=0.228848;DP=9443;DP4=4343,4602,9,18;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.08115e-08;MQSB=0.0034229;RPB=0.41105;SGB=23.9365;VDB=0.870492;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L248|401|LOC_Os07g16880|protein_coding|CODING|LOC_Os07g16880.1|1|1) FN3721-S.SNP.7:9931286 chr07:009931286 0 W/9931286-9931286 FN3721-S SNP C -> T AC=1;AN=190;BQB=0.291667;DP=5542;DP4=2445,2828,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0346445;MQB=0.999725;MQSB=3.04952e-13;RPB=0.994895;SGB=18.552;VDB=0.961363;EFF=INTERGENIC(MODIFIER||||||||||1) FN803-S.SNP.7:9932816 chr07:009932816 0 W/9932816-9932816 FN803-S Single Base Substitution G-C INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN446-S.SNP.7:9933149 chr07:009933149 0 W/9933149-9933149 FN446-S Single Base Substitution T-C INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1419-S.SNP.7:9939535 chr07:009939535 0 W/9939535-9939535 FN1419-S Single Base Substitution G-A INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2218-S.SNP.7:9944147 chr07:009944147 0 W/9944147-9944147 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.999899;DP=4517;DP4=1932,2287,16,14;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0117335;MQB=0.565445;MQSB=2.4719e-06;RPB=0.322578;SGB=131.065;VDB=0.437669;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C1552|1592|LOC_Os07g16910|protein_coding|CODING|LOC_Os07g16910.1|6|1) FN2218-S.SNP.7:9944834 chr07:009944834 0 W/9944834-9944834 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.790636;DP=6332;DP4=3355,2608,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.210834;MQB=0.0156462;MQSB=0;RPB=0.60807;SGB=-11.0065;VDB=0.572369;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T1323|1592|LOC_Os07g16910|protein_coding|CODING|LOC_Os07g16910.1|6|1) FN-162.SNP.7:9945279 chr07:009945279 0 W/9945279-9945279 FN-162 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. CW-631-3-1.SNP.7:9947197 chr07:009947197 0 W/9947197-9947197 CW-631-3-1 Single Base Substitution G-C INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN322-S.SNP.7:9947407 chr07:009947407 0 W/9947407-9947407 FN322-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN-95.SNP.7:9947749 chr07:009947749 0 W/9947749-9947749 FN-95 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN630-S.SNP.7:9948873 chr07:009948873 0 W/9948873-9948873 FN630-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN4001-S.SNP.7:9956931 chr07:009956931 0 W/9956931-9956931 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.889991;DP=2812;DP4=1482,1213,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0736131;MQB=0.387166;MQSB=1.45077e-16;RPB=0.443533;SGB=27.8864;VDB=0.889829;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.7:9959053 chr07:009959053 0 W/9959053-9959053 FN809-S Single Base Substitution A-G INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2680-S.SNP.7:9963624 chr07:009963624 0 W/9963624-9963624 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.950213;DP=4826;DP4=2403,2224,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70783e-16;MQSB=0.963258;RPB=0.762759;SGB=83.5316;VDB=0.690995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M114V|764|LOC_Os07g16930|protein_coding|CODING|LOC_Os07g16930.1|1|1) FN4258-S.SNP.7:9966898 chr07:009966898 0 W/9966898-9966898 FN4258-S SNP A -> G AC=1;AN=170;BQB=0.690459;DP=2446;DP4=1095,1269,2,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.99009e-05;MQSB=0.976526;RPB=0.987631;SGB=12.556;VDB=0.0574444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.7:9970617 chr07:009970617 0 W/9970617-9970617 FN1339-S Single Base Substitution C-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN704-S.SNP.7:9981805 chr07:009981805 0 W/9981805-9981805 FN704-S Single Base Substitution T-C INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2178-S.SNP.7:9985943 chr07:009985943 0 W/9985943-9985943 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.72596;DP=4193;DP4=2085,2072,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.88221e-07;MQSB=0.993444;RPB=0.994323;SGB=1.32907;VDB=0.694132;EFF=INTRON(MODIFIER||||446|LOC_Os07g16970|protein_coding|CODING|LOC_Os07g16970.1|6|1),INTRON(MODIFIER||||351|LOC_Os07g16970|protein_coding|CODING|LOC_Os07g16970.2|6|1) FN2325.SNP.7:9987364 chr07:009987364 0 W/9987364-9987364 FN2325 SNP C -> T AC=1;AN=192;BQB=0.13291;DP=5039;DP4=2403,2355,20,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.5757e-10;MQSB=0.663855;RPB=0.953723;SGB=54.5574;VDB=0.4335;EFF=INTRON(MODIFIER||||446|LOC_Os07g16970|protein_coding|CODING|LOC_Os07g16970.1|3|1),INTRON(MODIFIER||||351|LOC_Os07g16970|protein_coding|CODING|LOC_Os07g16970.2|3|1) FN860-S.SNP.7:9990945 chr07:009990945 0 W/9990945-9990945 FN860-S Single Base Substitution C-T INTRON HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN626-S.SNP.7:9993019 chr07:009993019 0 W/9993019-9993019 FN626-S Single Base Substitution T-A INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3426-S.SNP.7:9996681 chr07:009996681 0 W/9996681-9996681 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.932081;DP=3198;DP4=1600,1521,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.130707;MQB=0.177545;MQSB=4.07092e-12;RPB=0.923352;SGB=32.2261;VDB=0.787081;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1077|1444|LOC_Os07g16990|protein_coding|CODING|LOC_Os07g16990.1|1|1) FN_398-1.SNP.7:10004483 chr07:010004483 0 W/10004483-10004483 FN_398-1 Single Base Substitution C-T INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN2537-S.SNP.7:10008092 chr07:010008092 0 W/10008092-10008092 FN2537-S SNP A -> T AC=1;AN=198;BQB=0.997576;DP=4610;DP4=2241,2186,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00021692;MQB=9.92835e-11;MQSB=0.999995;RPB=0.803816;SGB=65.3149;VDB=0.271768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.7:10009156 chr07:010009156 0 W/10009156-10009156 FN1206-S Single Base Substitution T-C INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN3771-S.SNP.7:10032916 chr07:010032916 0 W/10032916-10032916 FN3771-S SNP G -> T AC=1;AN=190;BQB=0.97199;DP=2667;DP4=1210,1332,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.66293e-06;MQSB=0.994913;RPB=0.954976;SGB=13.4442;VDB=0.600818;EFF=INTRON(MODIFIER||||265|LOC_Os07g17040|protein_coding|CODING|LOC_Os07g17040.1|4|1) FN1494-S.SNP.7:10033835 chr07:010033835 0 W/10033835-10033835 FN1494-S Single Base Substitution A-G INTRON HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4148-S.SNP.7:10033835 chr07:010033835 0 W/10033835-10033835 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.967994;DP=1895;DP4=993,856,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.54465e-06;MQSB=0.983988;RPB=0.357026;SGB=43.4296;VDB=0.345322;EFF=INTRON(MODIFIER||||265|LOC_Os07g17040|protein_coding|CODING|LOC_Os07g17040.1|2|1) FN896-S.SNP.7:10033835 chr07:010033835 0 W/10033835-10033835 FN896-S Single Base Substitution A-G INTRON HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN950-S.SNP.7:10033835 chr07:010033835 0 W/10033835-10033835 FN950-S Single Base Substitution A-G INTRON HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1753-S.SNP.7:10036089 chr07:010036089 0 W/10036089-10036089 FN1753-S SNP G -> A AC=2;AN=188;BQB=0.756258;DP=4216;DP4=1751,2387,27,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.17993e-30;MQSB=0.989256;RPB=0.783474;SGB=-117.257;VDB=0.859794;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.7:10039712 chr07:010039712 0 W/10039712-10039712 FN505-S Single Base Substitution A-T INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2224-S.SNP.7:10040650 chr07:010040650 0 W/10040650-10040650 FN2224-S SNP C -> T AC=2;AN=190;BQB=0.058339;DP=1750;DP4=1383,110,8,2;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.38991e-05;MQSB=4.63434e-15;RPB=0.994513;SGB=10.8904;VDB=0.117011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.7:10040675 chr07:010040675 0 W/10040675-10040675 FN2224-S SNP G -> C AC=1;AN=190;BQB=0.625055;DP=1975;DP4=1559,265,6,1;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000586655;MQSB=1.04472e-23;RPB=0.149278;SGB=26.3271;VDB=0.402545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.7:10046437 chr07:010046437 0 W/10046437-10046437 FN1421-S Single Base Substitution A-G INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1156-S.SNP.7:10047415 chr07:010047415 0 W/10047415-10047415 FN1156-S Single Base Substitution T-C INTRON HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3823-S.SNP.7:10049432 chr07:010049432 0 W/10049432-10049432 FN3823-S SNP T -> C AC=1;AN=190;BQB=0.94218;DP=2834;DP4=1431,1321,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.81828e-10;MQSB=0.981122;RPB=0.816394;SGB=62.7569;VDB=0.995417;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G577|849|LOC_Os07g17090|protein_coding|CODING|LOC_Os07g17090.1|2|1) FN1717-S.SNP.7:10053712 chr07:010053712 0 W/10053712-10053712 FN1717-S SNP C -> A AC=1;AN=188;BQB=0.0396667;DP=2475;DP4=1092,1343,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03404e-05;MQSB=0.735476;RPB=0.718542;SGB=39.5276;VDB=0.126489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3985-S.SNP.7:10053905 chr07:010053905 0 W/10053905-10053905 FN3985-S SNP G -> A AC=1;AN=168;BQB=0.698766;DP=2498;DP4=1309,1100,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00080064;MQB=3.35091e-07;MQSB=0.979225;RPB=0.901903;SGB=45.0404;VDB=0.103143;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.7:10055292 chr07:010055292 0 W/10055292-10055292 FN400-S Single Base Substitution G-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1348-S.SNP.7:10063273 chr07:010063273 0 W/10063273-10063273 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-15.SNP.7:10065284 chr07:010065284 0 W/10065284-10065284 FN-15 Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os07g17130 FYVE zinc finger domain containing protein, expressed SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN2265-S.SNP.7:10068695 chr07:010068695 0 W/10068695-10068695 FN2265-S SNP C -> G AC=1;AN=190;BQB=0.629704;DP=4433;DP4=2199,2032,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56021e-11;MQSB=0.961916;RPB=0.829583;SGB=78.7471;VDB=0.42027;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.7:10076610 chr07:010076610 0 W/10076610-10076610 FN3451-S SNP C -> A AC=2;AN=184;BQB=0.94229;DP=3257;DP4=1725,1419,13,13;HOB=0.0215028;ICB=0.494625;MQ=27;MQ0F=0.0641695;MQB=0.603486;MQSB=9.96805e-13;RPB=0.991184;SGB=112.047;VDB=0.487422;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G937W|1056|LOC_Os07g17150|protein_coding|CODING|LOC_Os07g17150.1|4|1) FN2557-S.SNP.7:10081946 chr07:010081946 0 W/10081946-10081946 FN2557-S SNP T -> C AC=1;AN=198;BQB=0.999879;DP=3980;DP4=1822,1947,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.01192e-10;MQSB=0.892675;RPB=0.997725;SGB=15.7299;VDB=0.908728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.7:10088171 chr07:010088171 0 W/10088171-10088171 FN1566-S Single Base Substitution C-T INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3374-S.SNP.7:10089016 chr07:010089016 0 W/10089016-10089016 FN3374-S SNP C -> T AC=1;AN=184;BQB=0.846859;DP=2629;DP4=1353,1177,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33352e-07;MQSB=0.99729;RPB=0.853372;SGB=53.2642;VDB=0.505181;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.7:10092053 chr07:010092053 0 W/10092053-10092053 FN764-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g17160 expressed protein SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2588-S.SNP.7:10094352 chr07:010094352 0 W/10094352-10094352 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.788548;DP=4209;DP4=2157,1830,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.05984e-06;MQSB=0.880338;RPB=0.25687;SGB=35.7638;VDB=0.228571;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.7:10096262 chr07:010096262 0 W/10096262-10096262 FN-56 Single Base Substitution T-C INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-396.SNP.7:10097883 chr07:010097883 0 W/10097883-10097883 FN-396 Single Base Substitution G-T INTRON HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN3528-S.SNP.7:10104806 chr07:010104806 0 W/10104806-10104806 FN3528-S SNP G -> C AC=2;AN=188;BQB=0.888873;DP=2860;DP4=1399,1384,9,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.00028e-14;MQSB=0.914002;RPB=0.999764;SGB=112.585;VDB=0.583743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.7:10108562 chr07:010108562 0 W/10108562-10108562 FN2325 SNP T -> C AC=1;AN=192;BQB=0.973945;DP=4803;DP4=2387,2118,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.69838e-08;MQSB=0.000330435;RPB=0.796044;SGB=76.5965;VDB=0.962074;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.7:10114786 chr07:010114786 0 W/10114786-10114786 FN684-S Single Base Substitution G-A INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN684-S.SNP.7:10114787 chr07:010114787 0 W/10114787-10114787 FN684-S Single Base Substitution G-C INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1316-S.SNP.7:10116851 chr07:010116851 0 W/10116851-10116851 FN1316-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2656-S.SNP.7:10118511 chr07:010118511 0 W/10118511-10118511 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.0195313;DP=4834;DP4=2203,2296,15,15;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00868846;MQB=0.834765;MQSB=9.08093e-12;RPB=0.918463;SGB=97.9523;VDB=0.959394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.7:10127043 chr07:010127043 0 W/10127043-10127043 FN1153-S Single Base Substitution T-A INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1351-S.SNP.7:10135523 chr07:010135523 0 W/10135523-10135523 FN1351-S Single Base Substitution C-G INTRON HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3387-S.SNP.7:10145095 chr07:010145095 0 W/10145095-10145095 FN3387-S SNP G -> T AC=1;AN=184;BQB=0.879382;DP=3238;DP4=1518,1637,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05099e-08;MQSB=0.933055;RPB=0.747327;SGB=62.3078;VDB=0.599011;EFF=UTR_5_PRIME(MODIFIER||719||494|LOC_Os07g17220|protein_coding|CODING|LOC_Os07g17220.2|1|1),UTR_5_PRIME(MODIFIER||719||497|LOC_Os07g17220|protein_coding|CODING|LOC_Os07g17220.1|1|1) FN1504-S.SNP.7:10151327 chr07:010151327 0 W/10151327-10151327 FN1504-S Single Base Substitution C-T INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1176-S.SNP.7:10161588 chr07:010161588 0 W/10161588-10161588 FN1176-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3787-S.SNP.7:10165201 chr07:010165201 0 W/10165201-10165201 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.247592;DP=3073;DP4=1678,1309,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.228116;MQB=0.265136;MQSB=1.54524e-31;RPB=0.0463977;SGB=46.7622;VDB=0.265944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G993R|1610|LOC_Os07g17240|protein_coding|CODING|LOC_Os07g17240.1|3|1) FN3331-S.SNP.7:10170509 chr07:010170509 0 W/10170509-10170509 FN3331-S SNP C -> T AC=1;AN=184;BQB=0.939308;DP=3186;DP4=1582,1481,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40431e-09;MQSB=0.958426;RPB=0.798242;SGB=62.3078;VDB=0.0319099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.7:10185576 chr07:010185576 0 W/10185576-10185576 FN2252-S SNP A -> G AC=1;AN=190;BQB=0.944892;DP=4193;DP4=2114,1575,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.75508e-06;MQSB=0.999289;RPB=0.561207;SGB=50.3161;VDB=0.92212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q644R|1460|LOC_Os07g17260|protein_coding|CODING|LOC_Os07g17260.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q644R|1460|LOC_Os07g17260|protein_coding|CODING|LOC_Os07g17260.2|9|1) FN760-S.SNP.7:10207958 chr07:010207958 0 W/10207958-10207958 FN760-S Single Base Substitution A-C INTRON HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1697-S.SNP.7:10211462 chr07:010211462 0 W/10211462-10211462 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.331128;DP=2587;DP4=1428,1126,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0139157;MQB=0.00341278;MQSB=3.04246e-06;RPB=0.791079;SGB=7.0815;VDB=0.337857;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.7:10213030 chr07:010213030 0 W/10213030-10213030 FN4150-S SNP C -> T AC=1;AN=170;BQB=0.99984;DP=2729;DP4=1241,1322,46,73;HOB=6.92042e-05;ICB=0.000139222;MQ=26;MQ0F=0.178087;MQB=3.46074e-39;MQSB=0.68356;RPB=8.96314e-20;SGB=-1291.6;VDB=2.43216e-16;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L206|616|LOC_Os07g17290|protein_coding|CODING|LOC_Os07g17290.1|1|1) FN684-S.SNP.7:10214767 chr07:010214767 0 W/10214767-10214767 FN684-S Single Base Substitution T-A INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN970-S.SNP.7:10221699 chr07:010221699 0 W/10221699-10221699 FN970-S Single Base Substitution A-C INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1272-S.SNP.7:10222575 chr07:010222575 0 W/10222575-10222575 FN1272-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN896-S.SNP.7:10227161 chr07:010227161 0 W/10227161-10227161 FN896-S Single Base Substitution T-A INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. W450-6-1.SNP.7:10233112 chr07:010233112 0 W/10233112-10233112 W450-6-1 Single Base Substitution A-T INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3440-S.SNP.7:10238688 chr07:010238688 0 W/10238688-10238688 FN3440-S SNP T -> C AC=1;AN=184;BQB=0.991882;DP=3552;DP4=1474,1919,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.551239;MQB=0.00313974;MQSB=0.000121339;RPB=0.00442872;SGB=60.4004;VDB=0.0102698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H529R|1045|LOC_Os07g17340|protein_coding|CODING|LOC_Os07g17340.1|3|1) FN2768-S.SNP.7:10241632 chr07:010241632 0 W/10241632-10241632 FN2768-S SNP C -> T AC=1;AN=198;BQB=0.0523878;DP=2289;DP4=948,851,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00218436;MQB=0.00823662;MQSB=5.68001e-06;RPB=0.950353;SGB=29.3637;VDB=0.393696;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.7:10255522 chr07:010255522 0 W/10255522-10255522 FN669-S Single Base Substitution A-G INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2194-S.SNP.7:10266690 chr07:010266690 0 W/10266690-10266690 FN2194-S SNP T -> A AC=1;AN=190;BQB=0.23832;DP=4931;DP4=2068,2590,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04201e-12;MQSB=0.994279;RPB=0.514137;SGB=90.0802;VDB=0.0522519;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.7:10267122 chr07:010267122 0 W/10267122-10267122 FN564-S Single Base Substitution C-T INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2562-S.SNP.7:10267466 chr07:010267466 0 W/10267466-10267466 FN2562-S SNP T -> A AC=1;AN=198;BQB=0.93024;DP=4182;DP4=1939,2033,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.0011956;MQB=3.49155e-13;MQSB=0.865643;RPB=0.531735;SGB=83.2905;VDB=0.174303;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.7:10269688 chr07:010269688 0 W/10269688-10269688 FN_812-4-1 Single Base Substitution G-C Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1665-S.SNP.7:10278506 chr07:010278506 0 W/10278506-10278506 FN1665-S Single Base Substitution T-A INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1423-S.SNP.7:10281568 chr07:010281568 0 W/10281568-10281568 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1613-S.SNP.7:10284989 chr07:010284989 0 W/10284989-10284989 FN1613-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g17420 expressed protein SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN4208-S.SNP.7:10285228 chr07:010285228 0 W/10285228-10285228 FN4208-S SNP C -> T AC=2;AN=170;BQB=0.962232;DP=2257;DP4=1027,1158,16,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.90767e-12;MQSB=0.910315;RPB=0.316204;SGB=96.7413;VDB=0.240625;EFF=INTRON(MODIFIER||||454|LOC_Os07g17420|protein_coding|CODING|LOC_Os07g17420.1|3|1) FN1108-S.SNP.7:10292781 chr07:010292781 0 W/10292781-10292781 FN1108-S Single Base Substitution A-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2428.SNP.7:10304066 chr07:010304066 0 W/10304066-10304066 FN2428 SNP G -> C AC=1;AN=200;BQB=0.612831;DP=4540;DP4=2143,2114,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220264;MQB=1.92061e-08;MQSB=0.996542;RPB=0.759177;SGB=36.6644;VDB=0.372324;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.7:10305221 chr07:010305221 0 W/10305221-10305221 FN598-S Single Base Substitution C-T INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2448.SNP.7:10309947 chr07:010309947 0 W/10309947-10309947 FN2448 SNP T -> C AC=1;AN=200;BQB=0.993124;DP=3943;DP4=1543,1832,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43937e-05;MQSB=0.621589;RPB=0.820863;SGB=40.4492;VDB=0.170536;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.7:10310218 chr07:010310218 0 W/10310218-10310218 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.434663;DP=2090;DP4=1219,771,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.00269837;MQSB=0.0126609;RPB=0.967331;SGB=24.5502;VDB=0.748814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.7:10311128 chr07:010311128 0 W/10311128-10311128 FN1382-S Single Base Substitution G-A INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2666-S.SNP.7:10312621 chr07:010312621 0 W/10312621-10312621 FN2666-S SNP T -> A AC=2;AN=200;BQB=0.641904;DP=4924;DP4=2231,2498,26,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.509e-31;MQSB=0.777001;RPB=0.84338;SGB=220.051;VDB=0.148303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.7:10312622 chr07:010312622 0 W/10312622-10312622 FN2666-S SNP G -> A AC=2;AN=200;BQB=0.583357;DP=4940;DP4=2199,2505,29,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.36269e-33;MQSB=0.908149;RPB=0.881974;SGB=8.07072;VDB=0.0456215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.7:10314366 chr07:010314366 0 W/10314366-10314366 FN3729-S SNP C -> T AC=2;AN=190;BQB=0.998341;DP=2849;DP4=1439,1256,30,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.98227e-27;MQSB=0.999976;RPB=0.610949;SGB=216.609;VDB=0.262214;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.7:10322632 chr07:010322632 0 W/10322632-10322632 FN-143 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g17480 retrotransposon protein, putative, unclassified SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-81.SNP.7:10322747 chr07:010322747 0 W/10322747-10322747 FN-81 Single Base Substitution A-C INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN724-S.SNP.7:10337581 chr07:010337581 0 W/10337581-10337581 FN724-S Single Base Substitution A-G INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN618-S.SNP.7:10338336 chr07:010338336 0 W/10338336-10338336 FN618-S Single Base Substitution G-A INTERGENIC HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1717-S.SNP.7:10338729 chr07:010338729 0 W/10338729-10338729 FN1717-S SNP G -> A AC=1;AN=188;BQB=0.721285;DP=3235;DP4=1675,1528,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.949e-06;MQSB=0.881229;RPB=0.249738;SGB=3.99491;VDB=0.61005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.7:10344642 chr07:010344642 0 W/10344642-10344642 FN3864-S SNP C -> T AC=2;AN=158;BQB=0.796202;DP=2137;DP4=1108,929,15,12;HOB=0.024996;ICB=0.493752;MQ=24;MQ0F=0.108095;MQB=0.678131;MQSB=0.970984;RPB=0.913959;SGB=112.609;VDB=0.0585553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R837C|1098|LOC_Os07g17500|protein_coding|CODING|LOC_Os07g17500.1|1|1) FN-44.SNP.7:10356416 chr07:010356416 0 W/10356416-10356416 FN-44 Single Base Substitution A-G INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN444-S.SNP.7:10361470 chr07:010361470 0 W/10361470-10361470 FN444-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g17530 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN2614-S.SNP.7:10365152 chr07:010365152 0 W/10365152-10365152 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.939401;DP=4086;DP4=2058,1806,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.47182e-06;MQSB=0.28331;RPB=0.268352;SGB=11.1786;VDB=0.356498;EFF=INTRON(MODIFIER||||955|LOC_Os07g17530|protein_coding|CODING|LOC_Os07g17530.1|6|1) FN857-S.SNP.7:10367987 chr07:010367987 0 W/10367987-10367987 FN857-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g17540 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN799-S.SNP.7:10370136 chr07:010370136 0 W/10370136-10370136 FN799-S Single Base Substitution T-C INTERGENIC HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN2534-S.SNP.7:10371517 chr07:010371517 0 W/10371517-10371517 FN2534-S SNP G -> C AC=1;AN=198;BQB=0.563726;DP=4222;DP4=2360,1656,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16956e-11;MQSB=0.848216;RPB=0.345776;SGB=52.7004;VDB=0.973483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.7:10375358 chr07:010375358 0 W/10375358-10375358 FN2205-S SNP C -> T AC=1;AN=190;BQB=0.93491;DP=4760;DP4=2519,1929,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.02976e-13;MQSB=0.515485;RPB=0.993158;SGB=59.414;VDB=0.611021;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.7:10379874 chr07:010379874 0 W/10379874-10379874 FN864-S Single Base Substitution C-A INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN260-S.SNP.7:10385995 chr07:010385995 0 W/10385995-10385995 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3305-S.SNP.7:10391017 chr07:010391017 0 W/10391017-10391017 FN3305-S SNP C -> T AC=2;AN=184;BQB=0.489574;DP=3662;DP4=1520,1937,6,19;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00245767;MQB=3.89902e-09;MQSB=0.982165;RPB=0.184112;SGB=48.493;VDB=0.0610749;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.7:10391017 chr07:010391017 0 W/10391017-10391017 FN773-S Single Base Substitution C-T INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN860-S.SNP.7:10391017 chr07:010391017 0 W/10391017-10391017 FN860-S Single Base Substitution C-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2780-S.SNP.7:10397010 chr07:010397010 0 W/10397010-10397010 FN2780-S SNP G -> T AC=1;AN=198;BQB=0.695953;DP=3645;DP4=1865,1564,18,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000823045;MQB=1.7852e-09;MQSB=0.203132;RPB=0.573303;SGB=50.1053;VDB=0.360726;EFF=INTRON(MODIFIER||||1672|LOC_Os07g17610|protein_coding|CODING|LOC_Os07g17610.1|1|1) FN2618-S.SNP.7:10397571 chr07:010397571 0 W/10397571-10397571 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.682178;DP=3889;DP4=1925,1758,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0233993;MQB=0.986194;MQSB=0.268482;RPB=0.960143;SGB=100.095;VDB=0.409737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V76I|1672|LOC_Os07g17610|protein_coding|CODING|LOC_Os07g17610.1|2|1) FN2274-S.SNP.7:10402257 chr07:010402257 0 W/10402257-10402257 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.670545;DP=4161;DP4=2381,1500,16,12;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.0990147;MQB=0.963839;MQSB=0;RPB=0.961065;SGB=-40.7857;VDB=0.311247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R1498H|1672|LOC_Os07g17610|protein_coding|CODING|LOC_Os07g17610.1|5|1) FN2354.SNP.7:10403039 chr07:010403039 0 W/10403039-10403039 FN2354 SNP A -> T AC=1;AN=192;BQB=0.0296168;DP=4217;DP4=1899,1927,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00474271;MQB=0.000178158;MQSB=0.998455;RPB=0.124554;SGB=-83.753;VDB=0.433353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.7:10404468 chr07:010404468 0 W/10404468-10404468 FN2650-S SNP T -> G AC=1;AN=200;BQB=0.482205;DP=4084;DP4=1715,1958,17,23;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.167728;MQB=0.00261432;MQSB=0;RPB=0.9161;SGB=-579.599;VDB=0.63919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.7:10404960 chr07:010404960 0 W/10404960-10404960 FN1048-S Single Base Substitution G-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN4183-S.SNP.7:10407445 chr07:010407445 0 W/10407445-10407445 FN4183-S SNP C -> T AC=1;AN=170;BQB=0.962068;DP=2552;DP4=1156,1330,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.230016;MQB=0.248935;MQSB=3.85112e-20;RPB=0.380123;SGB=56.7575;VDB=0.515892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1094K|1745|LOC_Os07g17620|protein_coding|CODING|LOC_Os07g17620.1|3|1) FN2274-S.SNP.7:10413177 chr07:010413177 0 W/10413177-10413177 FN2274-S SNP G -> T AC=1;AN=190;BQB=0.718346;DP=2589;DP4=1338,1072,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0173812;MQB=0.996096;MQSB=0.0445009;RPB=0.906771;SGB=67.3108;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.7:10414448 chr07:010414448 0 W/10414448-10414448 FN-226 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1124-S.SNP.7:10416068 chr07:010416068 0 W/10416068-10416068 FN1124-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2471.SNP.7:10418568 chr07:010418568 0 W/10418568-10418568 FN2471 SNP A -> T AC=1;AN=200;BQB=0.673688;DP=4663;DP4=2264,2088,12,21;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.07229e-11;MQSB=0.918689;RPB=0.701242;SGB=108.768;VDB=0.685005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q1126H|1134|LOC_Os07g17630|protein_coding|CODING|LOC_Os07g17630.1|5|1) FN-66.SNP.7:10427829 chr07:010427829 0 W/10427829-10427829 FN-66 Single Base Substitution C-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN975-S.SNP.7:10432056 chr07:010432056 0 W/10432056-10432056 FN975-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g17670 retrotransposon protein, putative, unclassified, expressed SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2216-S.SNP.7:10439028 chr07:010439028 0 W/10439028-10439028 FN2216-S SNP C -> A AC=1;AN=190;BQB=0.271952;DP=4750;DP4=2357,2136,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000421053;MQB=1.69393e-11;MQSB=0.658424;RPB=0.852853;SGB=75.1932;VDB=0.605739;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.7:10440402 chr07:010440402 0 W/10440402-10440402 FN3479-S SNP T -> C AC=2;AN=184;BQB=0.591642;DP=2519;DP4=1056,1376,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000396983;MQB=3.43625e-12;MQSB=0.76479;RPB=0.958929;SGB=112.047;VDB=0.538638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.7:10442791 chr07:010442791 0 W/10442791-10442791 FN2103-S SNP T -> G AC=1;AN=168;BQB=0.837139;DP=3602;DP4=1733,1834,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.23642e-13;MQSB=0.854494;RPB=0.999065;SGB=18.4989;VDB=0.705001;EFF=UTR_3_PRIME(MODIFIER||39||60|LOC_Os07g17689|protein_coding|CODING|LOC_Os07g17689.1|1|1) FN1072-S.SNP.7:10445389 chr07:010445389 0 W/10445389-10445389 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN-85.SNP.7:10449932 chr07:010449932 0 W/10449932-10449932 FN-85 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g17700 retrotransposon protein, putative, unclassified SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1633-S.SNP.7:10454325 chr07:010454325 0 W/10454325-10454325 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2451.SNP.7:10458333 chr07:010458333 0 W/10458333-10458333 FN2451 SNP C -> A AC=1;AN=200;BQB=0.994586;DP=4539;DP4=2176,2046,12,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00837189;MQB=1.30765e-07;MQSB=0.19114;RPB=0.893609;SGB=47.4799;VDB=0.195331;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V199L|235|LOC_Os07g17710|protein_coding|CODING|LOC_Os07g17710.1|3|1) FN1389-S.SNP.7:10458626 chr07:010458626 0 W/10458626-10458626 FN1389-S Single Base Substitution G-T INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3758-S.SNP.7:10460797 chr07:010460797 0 W/10460797-10460797 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.998405;DP=3005;DP4=1498,1428,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15896e-06;MQSB=0.964364;RPB=0.865702;SGB=18.552;VDB=0.341291;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W84*|235|LOC_Os07g17710|protein_coding|CODING|LOC_Os07g17710.1|1|1);LOF=(LOC_Os07g17710|LOC_Os07g17710|1|1.00);NMD=(LOC_Os07g17710|LOC_Os07g17710|1|1.00) FN2500.SNP.7:10461287 chr07:010461287 0 W/10461287-10461287 FN2500 SNP C -> A AC=1;AN=200;BQB=0.914589;DP=4501;DP4=2171,2041,6,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00266607;MQB=0.00419353;MQSB=0.000104931;RPB=0.0268861;SGB=29.4541;VDB=0.177966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.7:10462746 chr07:010462746 0 W/10462746-10462746 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.910018;DP=4229;DP4=1921,2046,13,20;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.8341e-07;MQSB=0.988032;RPB=0.853912;SGB=108.456;VDB=0.561156;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D453|735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|8|1) FN3354-S.SNP.7:10463296 chr07:010463296 0 W/10463296-10463296 FN3354-S SNP G -> T AC=1;AN=184;BQB=0.96788;DP=5005;DP4=2644,2247,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0385614;MQB=0.000485715;MQSB=0.0114557;RPB=0.735171;SGB=70.9657;VDB=0.615641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F282L|735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|7|1) FN3354-S.SNP.7:10463299 chr07:010463299 0 W/10463299-10463299 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.994268;DP=5027;DP4=2651,2258,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0381938;MQB=0.000192086;MQSB=0.0250003;RPB=0.549825;SGB=84.9167;VDB=0.448016;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E281|735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|7|1) FN3514-S.SNP.7:10464319 chr07:010464319 0 W/10464319-10464319 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.764583;DP=3817;DP4=1829,1851,18,25;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=3.27671e-20;MQSB=0.964612;RPB=0.983173;SGB=142.283;VDB=0.0660012;EFF=SPLICE_SITE_REGION(LOW||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|4|1),INTRON(MODIFIER||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|4|1) FN3767-S.SNP.7:10464673 chr07:010464673 0 W/10464673-10464673 FN3767-S SNP G -> A AC=1;AN=190;BQB=0.931537;DP=2116;DP4=878,1122,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00330813;MQB=0.000114777;MQSB=5.72954e-05;RPB=0.650757;SGB=62.7569;VDB=0.138048;EFF=INTRON(MODIFIER||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|4|1) FN2540-S.SNP.7:10464944 chr07:010464944 0 W/10464944-10464944 FN2540-S SNP G -> A AC=1;AN=198;BQB=0.116904;DP=3186;DP4=1389,1384,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.000313873;MQB=1.17965e-05;MQSB=0.338594;RPB=0.996555;SGB=40.149;VDB=0.100839;EFF=INTRON(MODIFIER||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|4|1) FN4050-S.SNP.7:10465665 chr07:010465665 0 W/10465665-10465665 FN4050-S SNP C -> A AC=2;AN=168;BQB=0.982766;DP=2395;DP4=1367,892,20,14;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.045929;MQB=0.999893;MQSB=6.7914e-08;RPB=0.355828;SGB=145.22;VDB=0.749671;EFF=INTRON(MODIFIER||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|4|1) FN3452-S.SNP.7:10466756 chr07:010466756 0 W/10466756-10466756 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.938568;DP=2897;DP4=1240,1547,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000288257;MQSB=0.197794;RPB=0.992535;SGB=35.1773;VDB=0.439579;EFF=INTRON(MODIFIER||||735|LOC_Os07g17720|protein_coding|CODING|LOC_Os07g17720.1|2|1) FN900-S.SNP.7:10467810 chr07:010467810 0 W/10467810-10467810 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN1721-S.SNP.7:10470037 chr07:010470037 0 W/10470037-10470037 FN1721-S SNP C -> T AC=2;AN=188;BQB=0.155093;DP=2829;DP4=966,1814,12,24;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=3.73316e-06;MQSB=0.000956294;RPB=0.996584;SGB=-44.6718;VDB=0.233931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.7:10472637 chr07:010472637 0 W/10472637-10472637 FN1646-S Single Base Substitution A-G INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2440.SNP.7:10473080 chr07:010473080 0 W/10473080-10473080 FN2440 SNP T -> G AC=1;AN=200;BQB=0.922758;DP=4848;DP4=2274,2367,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72857e-06;MQSB=0.88866;RPB=0.989165;SGB=33.0593;VDB=0.092441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.7:10473927 chr07:010473927 0 W/10473927-10473927 FN2462 SNP T -> A AC=1;AN=200;BQB=0.930376;DP=4802;DP4=1949,2518,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07103e-06;MQSB=0.966006;RPB=0.620771;SGB=29.4541;VDB=0.555357;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.7:10475206 chr07:010475206 0 W/10475206-10475206 FN-181 Single Base Substitution C-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1255-S.SNP.7:10475650 chr07:010475650 0 W/10475650-10475650 FN1255-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1385-S.SNP.7:10479225 chr07:010479225 0 W/10479225-10479225 FN1385-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2666-S.SNP.7:10480702 chr07:010480702 0 W/10480702-10480702 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.792888;DP=4996;DP4=2288,2438,10,21;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0020016;MQB=5.93849e-13;MQSB=0.000312908;RPB=0.616171;SGB=101.557;VDB=0.181323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN1563-S Single Base Substitution G-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2115-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN2115-S SNP G -> A AC=2;AN=168;BQB=0.946307;DP=2580;DP4=881,1639,12,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000387597;MQB=1.97434e-17;MQSB=0.452433;RPB=0.993989;SGB=68.3702;VDB=0.484945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN2229-S SNP G -> A AC=2;AN=188;BQB=0.991841;DP=4911;DP4=2477,2050,30,37;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.06987e-32;MQSB=0.352253;RPB=0.921594;SGB=228.01;VDB=0.30728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.989224;DP=5055;DP4=2539,2254,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91506e-12;MQSB=0.512612;RPB=0.664101;SGB=91.1059;VDB=0.648302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.896749;DP=2971;DP4=1687,1177,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.66348e-16;MQSB=0.00848808;RPB=0.854122;SGB=140.173;VDB=0.0250845;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN3923-S SNP G -> A AC=1;AN=158;BQB=0.898091;DP=2561;DP4=1447,1025,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.53549e-06;MQSB=0.0297472;RPB=0.944802;SGB=42.6978;VDB=0.227606;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN420-S Single Base Substitution G-A INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN680-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN680-S Single Base Substitution G-A INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN796-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN796-S Single Base Substitution G-A INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN943-S.SNP.7:10483236 chr07:010483236 0 W/10483236-10483236 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1221-S.SNP.7:10487871 chr07:010487871 0 W/10487871-10487871 FN1221-S Single Base Substitution C-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1037-S.SNP.7:10488459 chr07:010488459 0 W/10488459-10488459 FN1037-S Single Base Substitution G-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN3630-S.SNP.7:10488924 chr07:010488924 0 W/10488924-10488924 FN3630-S SNP G -> A AC=2;AN=190;BQB=0.750613;DP=2748;DP4=1323,1304,6,16;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00545852;MQB=1.8089e-10;MQSB=0.00361847;RPB=0.767179;SGB=94.6341;VDB=0.657589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.7:10489927 chr07:010489927 0 W/10489927-10489927 FN3345-S SNP G -> A AC=1;AN=184;BQB=0.999845;DP=2986;DP4=1388,1489,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16334e-09;MQSB=0.463019;RPB=0.911701;SGB=49.835;VDB=0.876701;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.7:10490348 chr07:010490348 0 W/10490348-10490348 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2223-S.SNP.7:10493077 chr07:010493077 0 W/10493077-10493077 FN2223-S SNP G -> A AC=1;AN=188;BQB=0.900065;DP=4574;DP4=2173,2062,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.59911e-08;MQSB=0.853357;RPB=0.955337;SGB=28.7675;VDB=0.402928;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.7:10495664 chr07:010495664 0 W/10495664-10495664 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.779693;DP=2520;DP4=1134,1239,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000300251;MQSB=0.766992;RPB=0.89724;SGB=30.8803;VDB=0.267469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.7:10498272 chr07:010498272 0 W/10498272-10498272 FN2325 SNP T -> C AC=1;AN=192;BQB=0.660482;DP=4524;DP4=2135,1894,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.80258e-10;MQSB=0.856035;RPB=0.675819;SGB=-65.9365;VDB=0.831805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.7:10498273 chr07:010498273 0 W/10498273-10498273 FN2325 SNP A -> C AC=1;AN=192;BQB=0.963134;DP=4539;DP4=2174,1943,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7762e-11;MQSB=0.821974;RPB=0.9739;SGB=12.0478;VDB=0.893344;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.7:10499034 chr07:010499034 0 W/10499034-10499034 FN490-S Single Base Substitution G-C INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN2229-S.SNP.7:10504379 chr07:010504379 0 W/10504379-10504379 FN2229-S SNP C -> G AC=1;AN=188;BQB=0.972489;DP=5318;DP4=2325,2601,15,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.00916e-19;MQSB=0.992443;RPB=0.633934;SGB=121.394;VDB=0.0149774;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.7:10508737 chr07:010508737 0 W/10508737-10508737 W500-4-7-1 Single Base Substitution G-A INTRON HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN4279-S.SNP.7:10511171 chr07:010511171 0 W/10511171-10511171 FN4279-S SNP A -> G AC=1;AN=170;BQB=0.856987;DP=2226;DP4=844,1308,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.48075e-09;MQSB=0.293448;RPB=0.8164;SGB=45.206;VDB=0.496386;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.7:10522409 chr07:010522409 0 W/10522409-10522409 FN1476-S Single Base Substitution C-T INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3758-S.SNP.7:10524318 chr07:010524318 0 W/10524318-10524318 FN3758-S SNP C -> T AC=2;AN=190;BQB=0.99804;DP=2641;DP4=1299,1236,14,7;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00151458;MQB=2.38415e-09;MQSB=0.89459;RPB=0.191253;SGB=64.5316;VDB=0.229694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A367T|632|LOC_Os07g17790|protein_coding|CODING|LOC_Os07g17790.1|2|1) FN3504-S.SNP.7:10524798 chr07:010524798 0 W/10524798-10524798 FN3504-S SNP C -> A AC=1;AN=188;BQB=0.983041;DP=2737;DP4=1434,1252,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.69082e-08;MQSB=0.937685;RPB=0.564695;SGB=48.979;VDB=0.320291;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D207Y|632|LOC_Os07g17790|protein_coding|CODING|LOC_Os07g17790.1|2|1) FN3504-S.SNP.7:10524799 chr07:010524799 0 W/10524799-10524799 FN3504-S SNP A -> C AC=1;AN=188;BQB=0.845794;DP=2725;DP4=1424,1250,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31482e-08;MQSB=0.95233;RPB=0.661468;SGB=35.9843;VDB=0.254138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaG|N206K|632|LOC_Os07g17790|protein_coding|CODING|LOC_Os07g17790.1|2|1) FN3387-S.SNP.7:10524864 chr07:010524864 0 W/10524864-10524864 FN3387-S SNP C -> A AC=1;AN=184;BQB=0.864841;DP=2795;DP4=1317,1371,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11169e-07;MQSB=0.881095;RPB=0.945306;SGB=20.7533;VDB=0.900985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G185C|632|LOC_Os07g17790|protein_coding|CODING|LOC_Os07g17790.1|2|1) FN489-S.SNP.7:10529968 chr07:010529968 0 W/10529968-10529968 FN489-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g17800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1467-S.SNP.7:10540604 chr07:010540604 0 W/10540604-10540604 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN360-S.SNP.7:10541425 chr07:010541425 0 W/10541425-10541425 FN360-S Single Base Substitution A-G INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2657-S.SNP.7:10541787 chr07:010541787 0 W/10541787-10541787 FN2657-S SNP T -> C AC=1;AN=200;BQB=0.478834;DP=4824;DP4=2032,2344,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29767e-12;MQSB=0.99855;RPB=0.719802;SGB=39.9056;VDB=0.00846038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.7:10543743 chr07:010543743 0 W/10543743-10543743 FN2797-S SNP C -> T AC=1;AN=198;BQB=0.440973;DP=4265;DP4=1938,2100,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.41903e-08;MQSB=0.995783;RPB=0.986658;SGB=-13.8358;VDB=0.94431;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.7:10551904 chr07:010551904 0 W/10551904-10551904 FN996-S Single Base Substitution T-C INTRON HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN2537-S.SNP.7:10552363 chr07:010552363 0 W/10552363-10552363 FN2537-S SNP T -> A AC=2;AN=198;BQB=0.995108;DP=4365;DP4=1985,2181,11,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.84075e-16;MQSB=0.797361;RPB=0.869062;SGB=70.8662;VDB=0.67556;EFF=INTRON(MODIFIER||||564|LOC_Os07g17840|protein_coding|CODING|LOC_Os07g17840.1|2|1) FN2352.SNP.7:10552456 chr07:010552456 0 W/10552456-10552456 FN2352 SNP A -> T AC=2;AN=192;BQB=0.959467;DP=4718;DP4=2123,2110,13,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.3496e-21;MQSB=0.981393;RPB=0.79563;SGB=-0.659969;VDB=0.400156;EFF=INTRON(MODIFIER||||564|LOC_Os07g17840|protein_coding|CODING|LOC_Os07g17840.1|2|1) FN2381.SNP.7:10555321 chr07:010555321 0 W/10555321-10555321 FN2381 SNP T -> A AC=1;AN=192;BQB=0.990171;DP=5283;DP4=2553,2424,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.93461e-11;MQSB=0.980606;RPB=0.660574;SGB=34.0426;VDB=0.278583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.7:10556441 chr07:010556441 0 W/10556441-10556441 FN2271-S SNP C -> T AC=1;AN=188;BQB=0.0752352;DP=2568;DP4=975,1352,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.79078e-08;MQSB=1.94894e-05;RPB=0.333855;SGB=82.301;VDB=0.026777;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.7:10556685 chr07:010556685 0 W/10556685-10556685 FN3431-S SNP T -> A AC=1;AN=184;BQB=0.883037;DP=2935;DP4=1346,1416,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05872e-05;MQSB=0.940494;RPB=0.981465;SGB=35.7479;VDB=0.67854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.7:10557557 chr07:010557557 0 W/10557557-10557557 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.83058;DP=4160;DP4=1990,1880,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00011361;MQSB=0.965712;RPB=0.850945;SGB=32.9588;VDB=0.221633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2110-S.SNP.7:10560103 chr07:010560103 0 W/10560103-10560103 FN2110-S SNP G -> A AC=1;AN=168;BQB=0.527171;DP=3831;DP4=1443,2336,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.63047e-06;MQSB=0.999597;RPB=0.989631;SGB=1.32907;VDB=0.37956;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.7:10563308 chr07:010563308 0 W/10563308-10563308 FN524-S Single Base Substitution C-T INTERGENIC HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN524-S.SNP.7:10563309 chr07:010563309 0 W/10563309-10563309 FN524-S Single Base Substitution C-T INTERGENIC HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2397.SNP.7:10563671 chr07:010563671 0 W/10563671-10563671 FN2397 SNP G -> A AC=1;AN=200;BQB=0.999681;DP=3521;DP4=1585,1621,8,5;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00056802;MQB=0.00112025;MQSB=5.91239e-23;RPB=0.986639;SGB=36.6644;VDB=0.524632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.7:10569786 chr07:010569786 0 W/10569786-10569786 FN1415-S Single Base Substitution T-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN818-S.SNP.7:10569926 chr07:010569926 0 W/10569926-10569926 FN818-S Single Base Substitution G-A INTERGENIC HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN2667-S.SNP.7:10570155 chr07:010570155 0 W/10570155-10570155 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.0530655;DP=4652;DP4=1937,2136,21,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36053e-06;MQSB=0.884509;RPB=0.981564;SGB=-235.26;VDB=0.0801514;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G6|400|LOC_Os07g17860|protein_coding|CODING|LOC_Os07g17860.1|1|1) FN_798-4-2.SNP.7:10571808 chr07:010571808 0 W/10571808-10571808 FN_798-4-2 Single Base Substitution G-A Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN512-S.SNP.7:10572017 chr07:010572017 0 W/10572017-10572017 FN512-S Single Base Substitution C-A INTRON HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3480-S.SNP.7:10572269 chr07:010572269 0 W/10572269-10572269 FN3480-S SNP A -> T AC=1;AN=184;BQB=0.990794;DP=3709;DP4=1886,1637,7,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12555e-12;MQSB=0.989617;RPB=0.826363;SGB=45.9712;VDB=0.806359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N117I|400|LOC_Os07g17860|protein_coding|CODING|LOC_Os07g17860.1|3|1),SPLICE_SITE_REGION(LOW||||400|LOC_Os07g17860|protein_coding|CODING|LOC_Os07g17860.1|3|1) FN1617-S.SNP.7:10574466 chr07:010574466 0 W/10574466-10574466 FN1617-S Single Base Substitution C-T INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN914-S.SNP.7:10575173 chr07:010575173 0 W/10575173-10575173 FN914-S Single Base Substitution A-G INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2620-S.SNP.7:10576426 chr07:010576426 0 W/10576426-10576426 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.50601;DP=3843;DP4=1737,1881,13,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.0234e-14;MQSB=0.749282;RPB=0.607405;SGB=141.451;VDB=0.478677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.7:10577472 chr07:010577472 0 W/10577472-10577472 FN3415-S SNP G -> A AC=1;AN=184;BQB=0.99821;DP=2393;DP4=1249,1025,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.00620695;MQSB=0.520289;RPB=0.929659;SGB=48.7425;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.7:10578109 chr07:010578109 0 W/10578109-10578109 FN4101-S SNP C -> G AC=2;AN=182;BQB=0.984249;DP=2795;DP4=1362,1373,9,7;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00143113;MQB=4.14943e-09;MQSB=0.924019;RPB=0.310811;SGB=66.6657;VDB=0.552258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.7:10578403 chr07:010578403 0 W/10578403-10578403 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.946659;DP=2495;DP4=1193,1224,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00160321;MQB=1.35429e-05;MQSB=0.728784;RPB=0.724072;SGB=33.9591;VDB=0.391945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:10578576 chr07:010578576 0 W/10578576-10578576 FN2554-S SNP C -> A AC=1;AN=198;BQB=0.969162;DP=3953;DP4=1825,1920,3,28;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00607134;MQB=1.02473e-14;MQSB=0.000196473;RPB=0.982861;SGB=-361.405;VDB=0.000553941;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.7:10579040 chr07:010579040 0 W/10579040-10579040 FN961-S Single Base Substitution C-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN_776-5-1.SNP.7:10593847 chr07:010593847 0 W/10593847-10593847 FN_776-5-1 Single Base Substitution A-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN1085-S.SNP.7:10594479 chr07:010594479 0 W/10594479-10594479 FN1085-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g17910 retrotransposon protein, putative, unclassified, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2617-S.SNP.7:10597908 chr07:010597908 0 W/10597908-10597908 FN2617-S SNP C -> A AC=2;AN=198;BQB=0.731768;DP=3956;DP4=1881,1885,22,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.58861e-19;MQSB=0.917921;RPB=0.849008;SGB=136.856;VDB=0.606945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E355D|1259|LOC_Os07g17910|protein_coding|CODING|LOC_Os07g17910.1|2|1) FN2617-S.SNP.7:10597909 chr07:010597909 0 W/10597909-10597909 FN2617-S SNP T -> C AC=2;AN=198;BQB=0.295511;DP=3967;DP4=1861,1793,23,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.9915e-20;MQSB=0.986703;RPB=0.765715;SGB=-1.93338;VDB=0.481754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E355G|1259|LOC_Os07g17910|protein_coding|CODING|LOC_Os07g17910.1|2|1) FN2356.SNP.7:10601364 chr07:010601364 0 W/10601364-10601364 FN2356 SNP C -> T AC=1;AN=192;BQB=0.162031;DP=4773;DP4=2244,2250,20,16;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0123612;MQB=0.404514;MQSB=0.604482;RPB=0.992297;SGB=-3.48171;VDB=0.567766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.7:10602380 chr07:010602380 0 W/10602380-10602380 FN2556-S SNP G -> A AC=2;AN=198;BQB=0.0553224;DP=3520;DP4=1459,1829,18,26;HOB=0.019998;ICB=0.495001;MQ=39;MQ0F=0.01875;MQB=0.916115;MQSB=0.912071;RPB=0.991102;SGB=148.003;VDB=0.122705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.7:10604725 chr07:010604725 0 W/10604725-10604725 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.614016;DP=5555;DP4=2427,2897,32,14;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0239424;MQB=1.45877e-06;MQSB=1.31656e-22;RPB=0.0418077;SGB=-47.1674;VDB=0.940951;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G143*|263|LOC_Os07g17920|protein_coding|CODING|LOC_Os07g17920.1|1|1) FN2660-S.SNP.7:10608441 chr07:010608441 0 W/10608441-10608441 FN2660-S SNP G -> C AC=1;AN=200;BQB=0.568847;DP=3868;DP4=1870,1774,7,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00336091;MQB=0.000447677;MQSB=0.00380921;RPB=0.999835;SGB=29.4541;VDB=0.635956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G155A|188|LOC_Os07g17930|protein_coding|CODING|LOC_Os07g17930.1|1|1) FN-35.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN-35 Single Base Substitution C-T INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1315-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN1315-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1430-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN1430-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1619-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN1619-S Single Base Substitution C-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2121-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN2121-S SNP C -> T AC=2;AN=168;BQB=0.589063;DP=3067;DP4=1840,1182,23,7;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0860776;MQB=0.220041;MQSB=1.03943e-16;RPB=0.500636;SGB=-44.6276;VDB=0.886099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN2445 SNP C -> T AC=2;AN=200;BQB=0.99305;DP=4763;DP4=2639,1749,19,12;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0466093;MQB=0.0639661;MQSB=7.68661e-07;RPB=0.982083;SGB=101.557;VDB=0.622725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.554054;DP=3243;DP4=1549,1550,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0385446;MQB=0.269343;MQSB=1.74692e-05;RPB=0.430818;SGB=3.75875;VDB=0.779786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN3697-S SNP C -> T AC=1;AN=190;BQB=0.958993;DP=2861;DP4=1664,1056,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0401957;MQB=0.265947;MQSB=0.2206;RPB=0.9912;SGB=32.5467;VDB=0.992592;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN4049-S SNP C -> T AC=2;AN=168;BQB=0.306684;DP=2889;DP4=1532,1208,13,15;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.0422291;MQB=0.0826659;MQSB=2.03042e-05;RPB=0.961212;SGB=53.7853;VDB=0.437529;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.342247;DP=2499;DP4=1118,1289,5,12;HOB=0.0217365;ICB=0.494567;MQ=42;MQ0F=0.0432173;MQB=0.689945;MQSB=1.48692e-10;RPB=0.523222;SGB=28.1658;VDB=0.251073;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN437-S Single Base Substitution C-T INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN550-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN550-S Single Base Substitution C-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN885-S.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN885-S Single Base Substitution C-T INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN_789-3-1.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 FN_789-3-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. W246-5-1.SNP.7:10608673 chr07:010608673 0 W/10608673-10608673 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2173-S.SNP.7:10609978 chr07:010609978 0 W/10609978-10609978 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.339973;DP=3006;DP4=1604,1352,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=22;MQ0F=0.236194;MQB=0.423447;MQSB=0;RPB=0.32632;SGB=-14.0801;VDB=0.046444;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.7:10610113 chr07:010610113 0 W/10610113-10610113 FN733-S Single Base Substitution T-A INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN2542-S.SNP.7:10610761 chr07:010610761 0 W/10610761-10610761 FN2542-S SNP C -> G AC=1;AN=198;BQB=0.355115;DP=4237;DP4=2010,1999,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.87997e-07;MQSB=0.367898;RPB=0.290427;SGB=61.7198;VDB=0.39033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.7:10613538 chr07:010613538 0 W/10613538-10613538 FN1154-S Single Base Substitution G-C INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN891-S.SNP.7:10616253 chr07:010616253 0 W/10616253-10616253 FN891-S Single Base Substitution T-C INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2137-S.SNP.7:10624066 chr07:010624066 0 W/10624066-10624066 FN2137-S SNP G -> A AC=2;AN=168;BQB=0.590279;DP=2081;DP4=1534,456,18,7;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0245074;MQB=0.00553358;MQSB=0.000371906;RPB=0.571537;SGB=17.068;VDB=0.466135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.7:10628031 chr07:010628031 0 W/10628031-10628031 FN3557-S SNP C -> T AC=1;AN=188;BQB=0.98514;DP=2885;DP4=1441,1381,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00693241;MQB=0.0647516;MQSB=5.62058e-15;RPB=0.1004;SGB=62.6088;VDB=0.471439;EFF=INTRON(MODIFIER||||953|LOC_Os07g17960|protein_coding|CODING|LOC_Os07g17960.1|1|1) FN2300.SNP.7:10629091 chr07:010629091 0 W/10629091-10629091 FN2300 SNP G -> A AC=1;AN=192;BQB=0.621241;DP=3709;DP4=2126,1342,11,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000269614;MQB=5.86538e-07;MQSB=1.13738e-06;RPB=0.922689;SGB=43.3444;VDB=0.470489;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.7:10631782 chr07:010631782 0 W/10631782-10631782 FN367-S Single Base Substitution C-T INTERGENIC HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3866-S.SNP.7:10635928 chr07:010635928 0 W/10635928-10635928 FN3866-S SNP C -> A AC=1;AN=158;BQB=0.357767;DP=2215;DP4=1043,1076,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.98008e-05;MQSB=0.999792;RPB=0.986762;SGB=14.3409;VDB=0.991645;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.7:10635929 chr07:010635929 0 W/10635929-10635929 FN-165 Single Base Substitution C-A INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3510-S.SNP.7:10638756 chr07:010638756 0 W/10638756-10638756 FN3510-S SNP T -> A AC=2;AN=188;BQB=0.851676;DP=2510;DP4=1122,1285,12,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.71896e-14;MQSB=0.000522814;RPB=0.998604;SGB=92.677;VDB=0.661579;EFF=INTRON(MODIFIER||||558|LOC_Os07g17970|protein_coding|CODING|LOC_Os07g17970.1|1|1),INTRON(MODIFIER||||483|LOC_Os07g17970|protein_coding|CODING|LOC_Os07g17970.2|1|1) W247-2-1.SNP.7:10646502 chr07:010646502 0 W/10646502-10646502 W247-2-1 Single Base Substitution G-A INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN-175.SNP.7:10647379 chr07:010647379 0 W/10647379-10647379 FN-175 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g17980 retrotransposon, putative, centromere-specific, expressed SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2457.SNP.7:10653862 chr07:010653862 0 W/10653862-10653862 FN2457 SNP C -> T AC=1;AN=200;BQB=0.986514;DP=4431;DP4=2278,1923,13,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.99822e-10;MQSB=0.901681;RPB=0.999876;SGB=68.0801;VDB=0.163364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R205H|648|LOC_Os07g18000|protein_coding|CODING|LOC_Os07g18000.1|3|1) FN3786-S.SNP.7:10663979 chr07:010663979 0 W/10663979-10663979 FN3786-S SNP G -> C AC=2;AN=190;BQB=0.976826;DP=2828;DP4=1297,1441,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.46119e-11;MQSB=0.999841;RPB=0.20683;SGB=90.0802;VDB=0.65343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.7:10664355 chr07:010664355 0 W/10664355-10664355 FN2630-S SNP A -> C AC=1;AN=200;BQB=0.775269;DP=4712;DP4=2246,2153,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212224;MQB=1.51993e-09;MQSB=0.667399;RPB=0.994716;SGB=14.3054;VDB=0.0818841;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.7:10664984 chr07:010664984 0 W/10664984-10664984 FN474-S Single Base Substitution C-T INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN354-S.SNP.7:10665790 chr07:010665790 0 W/10665790-10665790 FN354-S Single Base Substitution G-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3478-S.SNP.7:10666097 chr07:010666097 0 W/10666097-10666097 FN3478-S SNP C -> T AC=1;AN=184;BQB=0.863717;DP=2494;DP4=1314,1034,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0164395;MQB=0.994037;MQSB=9.09022e-42;RPB=0.374213;SGB=44.2207;VDB=0.253803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.7:10670537 chr07:010670537 0 W/10670537-10670537 FN3363-S SNP T -> G AC=1;AN=184;BQB=0.960079;DP=3000;DP4=1281,1592,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69863e-11;MQSB=0.556214;RPB=0.936412;SGB=80.3949;VDB=0.316956;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.7:10671036 chr07:010671036 0 W/10671036-10671036 FN437-S Single Base Substitution A-G INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN3727-S.SNP.7:10671039 chr07:010671039 0 W/10671039-10671039 FN3727-S SNP A -> G AC=2;AN=190;BQB=0.999091;DP=2415;DP4=1018,1292,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.11588e-09;MQSB=0.998349;RPB=0.0742966;SGB=-13.222;VDB=0.266315;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.7:10672518 chr07:010672518 0 W/10672518-10672518 FN-316 Single Base Substitution C-T INTRON HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-152.SNP.7:10673799 chr07:010673799 0 W/10673799-10673799 FN-152 Single Base Substitution C-T INTRON HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN-117.SNP.7:10674140 chr07:010674140 0 W/10674140-10674140 FN-117 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g18030 retrotransposon protein, putative, unclassified, expressed SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN-53.SNP.7:10682045 chr07:010682045 0 W/10682045-10682045 FN-53 Single Base Substitution A-T INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN1652-S.SNP.7:10682045 chr07:010682045 0 W/10682045-10682045 FN1652-S Single Base Substitution A-T INTRON HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN2110-S.SNP.7:10682045 chr07:010682045 0 W/10682045-10682045 FN2110-S SNP A -> T AC=2;AN=168;BQB=0.0882055;DP=4119;DP4=1888,2138,40,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.95897e-28;MQSB=0.951457;RPB=0.427641;SGB=-588.369;VDB=0.803793;EFF=INTRON(MODIFIER||||486|LOC_Os07g18050|protein_coding|CODING|LOC_Os07g18050.1|2|1) FN3569-S.SNP.7:10682045 chr07:010682045 0 W/10682045-10682045 FN3569-S SNP A -> T AC=1;AN=188;BQB=0.931627;DP=2878;DP4=1378,1412,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.63978e-12;MQSB=0.985866;RPB=0.92257;SGB=57.244;VDB=0.548896;EFF=INTRON(MODIFIER||||486|LOC_Os07g18050|protein_coding|CODING|LOC_Os07g18050.1|2|1) FN2620-S.SNP.7:10682927 chr07:010682927 0 W/10682927-10682927 FN2620-S SNP G -> A AC=2;AN=198;BQB=0.998649;DP=3317;DP4=1555,1565,27,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.27595e-31;MQSB=0.431082;RPB=0.999975;SGB=188.178;VDB=0.999336;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P31L|486|LOC_Os07g18050|protein_coding|CODING|LOC_Os07g18050.1|1|1) FN2537-S.SNP.7:10694165 chr07:010694165 0 W/10694165-10694165 FN2537-S SNP C -> A AC=2;AN=198;BQB=0.0855088;DP=3980;DP4=1836,1860,11,13;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=5.62437e-09;MQSB=0.0261951;RPB=0.956482;SGB=47.5102;VDB=0.982326;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.7:10696302 chr07:010696302 0 W/10696302-10696302 FN4247-S SNP G -> A AC=1;AN=170;BQB=0.985025;DP=2553;DP4=1137,1367,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=20;MQ0F=0.351351;MQB=0.270046;MQSB=3.5309e-09;RPB=0.97105;SGB=34.878;VDB=0.139941;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L151|1101|LOC_Os07g18080|protein_coding|CODING|LOC_Os07g18080.1|1|1) FN2558-S.SNP.7:10705333 chr07:010705333 0 W/10705333-10705333 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.998849;DP=4091;DP4=1941,1883,20,27;HOB=0.019998;ICB=0.495001;MQ=33;MQ0F=0.0892202;MQB=0.0200738;MQSB=0.00274826;RPB=0.815513;SGB=210.378;VDB=0.701359;EFF=INTRON(MODIFIER||||1081|LOC_Os07g18090|protein_coding|CODING|LOC_Os07g18090.1|8|1) FN_809-6-1.SNP.7:10706873 chr07:010706873 0 W/10706873-10706873 FN_809-6-1 Single Base Substitution C-T HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN3699-S.SNP.7:10713917 chr07:010713917 0 W/10713917-10713917 FN3699-S SNP G -> C AC=2;AN=190;BQB=0.992814;DP=2856;DP4=1068,1620,16,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.96514e-20;MQSB=0.913901;RPB=0.339964;SGB=117.84;VDB=0.170948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.7:10714287 chr07:010714287 0 W/10714287-10714287 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.398007;DP=3798;DP4=1419,2044,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14303e-06;MQSB=0.381386;RPB=0.978225;SGB=57.4238;VDB=0.897614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.7:10723837 chr07:010723837 0 W/10723837-10723837 FN3057-S SNP G -> A AC=2;AN=184;BQB=0.942818;DP=2644;DP4=1417,1081,9,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11539e-11;MQSB=0.99414;RPB=0.952453;SGB=63.9222;VDB=0.418504;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.7:10725920 chr07:010725920 0 W/10725920-10725920 FN2445 SNP A -> T AC=1;AN=200;BQB=0.813358;DP=3974;DP4=2085,1555,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000251636;MQB=1.68197e-10;MQSB=0.111192;RPB=0.797731;SGB=91.1059;VDB=0.30216;EFF=INTRON(MODIFIER||||1365|LOC_Os07g18120|protein_coding|CODING|LOC_Os07g18120.1|1|1) FN-248.SNP.7:10727347 chr07:010727347 0 W/10727347-10727347 FN-248 Single Base Substitution G-A INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3534-S.SNP.7:10727347 chr07:010727347 0 W/10727347-10727347 FN3534-S SNP G -> A AC=2;AN=188;BQB=0.841459;DP=2649;DP4=970,1514,10,16;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=3.0537e-13;MQSB=0.000839812;RPB=0.188101;SGB=82.0471;VDB=0.17899;EFF=INTRON(MODIFIER||||1365|LOC_Os07g18120|protein_coding|CODING|LOC_Os07g18120.1|1|1) FN3803-S.SNP.7:10727347 chr07:010727347 0 W/10727347-10727347 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.867112;DP=2132;DP4=747,1213,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=3.07102e-07;MQSB=0.000217199;RPB=0.822845;SGB=71.8647;VDB=0.545922;EFF=INTRON(MODIFIER||||1365|LOC_Os07g18120|protein_coding|CODING|LOC_Os07g18120.1|1|1) FN2153-S.SNP.7:10727567 chr07:010727567 0 W/10727567-10727567 FN2153-S SNP T -> G AC=2;AN=168;BQB=0.364028;DP=3926;DP4=2272,1588,15,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.15147e-19;MQSB=0.95919;RPB=0.381457;SGB=103.364;VDB=0.503269;EFF=INTRON(MODIFIER||||1365|LOC_Os07g18120|protein_coding|CODING|LOC_Os07g18120.1|1|1) FN463-S.SNP.7:10740291 chr07:010740291 0 W/10740291-10740291 FN463-S Single Base Substitution A-T INTRON HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN3400-S.SNP.7:10740621 chr07:010740621 0 W/10740621-10740621 FN3400-S SNP T -> A AC=1;AN=184;BQB=0.707352;DP=3204;DP4=1406,1613,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66281e-10;MQSB=0.99633;RPB=0.762038;SGB=30.8405;VDB=0.623607;EFF=INTRON(MODIFIER||||284|LOC_Os07g18130|protein_coding|CODING|LOC_Os07g18130.1|1|1) FN2348.SNP.7:10741989 chr07:010741989 0 W/10741989-10741989 FN2348 SNP C -> T AC=2;AN=192;BQB=0.7703;DP=4847;DP4=2364,2135,21,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.80177e-24;MQSB=0.925568;RPB=0.793386;SGB=1.03308;VDB=0.939427;EFF=INTRON(MODIFIER||||284|LOC_Os07g18130|protein_coding|CODING|LOC_Os07g18130.1|2|1) FN803-S.SNP.7:10746202 chr07:010746202 0 W/10746202-10746202 FN803-S Single Base Substitution C-G INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN_N1-150-1.SNP.7:10757742 chr07:010757742 0 W/10757742-10757742 FN_N1-150-1 Single Base Substitution G-T HET LOC_Os07g18154 aldehyde oxidase 4, putative, expressed SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2190-S.SNP.7:10768624 chr07:010768624 0 W/10768624-10768624 FN2190-S SNP T -> A AC=1;AN=190;BQB=0.798931;DP=5125;DP4=2513,2177,26,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20978e-24;MQSB=0.979165;RPB=0.703623;SGB=139.163;VDB=0.0534016;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.7:10769305 chr07:010769305 0 W/10769305-10769305 FN3064-S SNP C -> T AC=1;AN=184;BQB=0.973264;DP=2989;DP4=1328,1552,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.59763e-08;MQSB=0.998617;RPB=0.964822;SGB=48.7425;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN560-S.SNP.7:10770073 chr07:010770073 0 W/10770073-10770073 FN560-S Single Base Substitution T-C INTRON HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN771-S.SNP.7:10779501 chr07:010779501 0 W/10779501-10779501 FN771-S Single Base Substitution G-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2345.SNP.7:10782250 chr07:010782250 0 W/10782250-10782250 FN2345 SNP G -> T AC=1;AN=192;BQB=0.363686;DP=3499;DP4=1984,1311,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12791e-16;MQSB=0.932775;RPB=0.609012;SGB=93.2452;VDB=0.535487;EFF=INTRON(MODIFIER||||1412|LOC_Os07g18190|protein_coding|CODING|LOC_Os07g18190.1|2|1) FN1162-S.SNP.7:10783516 chr07:010783516 0 W/10783516-10783516 FN1162-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g18190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN-190.SNP.7:10784983 chr07:010784983 0 W/10784983-10784983 FN-190 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2591-S.SNP.7:10785356 chr07:010785356 0 W/10785356-10785356 FN2591-S SNP G -> A AC=1;AN=188;BQB=0.99097;DP=3974;DP4=1765,2030,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.845e-08;MQSB=0.98852;RPB=0.99604;SGB=54.144;VDB=0.974607;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V778I|1412|LOC_Os07g18190|protein_coding|CODING|LOC_Os07g18190.1|5|1) FN3717-S.SNP.7:10786955 chr07:010786955 0 W/10786955-10786955 FN3717-S SNP G -> A AC=2;AN=190;BQB=0.999267;DP=3021;DP4=1459,1435,9,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.10935e-08;MQSB=0.998631;RPB=0.701499;SGB=39.6545;VDB=0.386171;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1116|1412|LOC_Os07g18190|protein_coding|CODING|LOC_Os07g18190.1|8|1) FN1638-S.SNP.7:10787587 chr07:010787587 0 W/10787587-10787587 FN1638-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g18190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1516-S.SNP.7:10791173 chr07:010791173 0 W/10791173-10791173 FN1516-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN3468-S.SNP.7:10795170 chr07:010795170 0 W/10795170-10795170 FN3468-S SNP A -> T AC=2;AN=184;BQB=0.993422;DP=2639;DP4=1302,1203,13,18;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0125047;MQB=0.000244802;MQSB=3.14427e-09;RPB=0.999751;SGB=99.14;VDB=0.914103;EFF=INTERGENIC(MODIFIER||||||||||1) FN-119.SNP.7:10801274 chr07:010801274 0 W/10801274-10801274 FN-119 Single Base Substitution T-C INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2288.SNP.7:10807400 chr07:010807400 0 W/10807400-10807400 FN2288 SNP G -> C AC=2;AN=192;BQB=0.934501;DP=4626;DP4=2213,2172,20,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.58539e-21;MQSB=0.480731;RPB=0.0558511;SGB=128.889;VDB=0.475998;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.7:10808021 chr07:010808021 0 W/10808021-10808021 FN939-S Single Base Substitution G-A INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. W500-4-7-1.SNP.7:10809029 chr07:010809029 0 W/10809029-10809029 W500-4-7-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN1475-S.SNP.7:10830532 chr07:010830532 0 W/10830532-10830532 FN1475-S Single Base Substitution C-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1176-S.SNP.7:10831413 chr07:010831413 0 W/10831413-10831413 FN1176-S Single Base Substitution C-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1065-S.SNP.7:10832288 chr07:010832288 0 W/10832288-10832288 FN1065-S Single Base Substitution C-T INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3750-S.SNP.7:10833372 chr07:010833372 0 W/10833372-10833372 FN3750-S SNP G -> A AC=1;AN=190;BQB=0.953131;DP=2356;DP4=1114,1119,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0233447;MQB=0.963468;MQSB=0.0093801;RPB=0.557285;SGB=80.9724;VDB=0.153313;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.7:10833693 chr07:010833693 0 W/10833693-10833693 FN4208-S SNP G -> A AC=1;AN=170;BQB=0.999996;DP=2682;DP4=1443,1131,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00111857;MQB=6.24741e-06;MQSB=0.857378;RPB=0.951115;SGB=14.9986;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:10833775 chr07:010833775 0 W/10833775-10833775 FN2619-S SNP C -> G AC=2;AN=186;BQB=0.77587;DP=3444;DP4=1629,1587,33,41;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0.00116144;MQB=8.86596e-31;MQSB=0.830729;RPB=0.99751;SGB=245.689;VDB=0.820114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.7:10842949 chr07:010842949 0 W/10842949-10842949 FN2080-S SNP C -> G AC=1;AN=168;BQB=0.543635;DP=3664;DP4=1683,1939,20,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.80231e-17;MQSB=0.923635;RPB=0.778989;SGB=-83.76;VDB=0.525478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R709S|883|LOC_Os07g18300|protein_coding|CODING|LOC_Os07g18300.1|9|1) FN2689-S.SNP.7:10849164 chr07:010849164 0 W/10849164-10849164 FN2689-S SNP A -> T AC=1;AN=200;BQB=0.853239;DP=4998;DP4=2380,2409,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.96924e-09;MQSB=0.872093;RPB=0.986416;SGB=-13.7154;VDB=0.959812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.7:10850607 chr07:010850607 0 W/10850607-10850607 FN1113-S Single Base Substitution G-C INTERGENIC HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2697-S.SNP.7:10856467 chr07:010856467 0 W/10856467-10856467 FN2697-S SNP T -> C AC=1;AN=200;BQB=0.999945;DP=4871;DP4=2262,2384,11,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58301e-17;MQSB=0.85524;RPB=0.521229;SGB=105.163;VDB=0.238927;EFF=INTRON(MODIFIER||||83|LOC_Os07g18320|protein_coding|CODING|LOC_Os07g18320.1|2|1) FN3913-S.SNP.7:10865679 chr07:010865679 0 W/10865679-10865679 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.806534;DP=2458;DP4=1001,1354,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.04469e-10;MQSB=0.928348;RPB=0.99034;SGB=73.2838;VDB=0.506425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.7:10868575 chr07:010868575 0 W/10868575-10868575 FN2260-S SNP A -> G AC=1;AN=190;BQB=0.602507;DP=5312;DP4=2476,2255,23,19;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0534639;MQB=0.618912;MQSB=0;RPB=0.525786;SGB=-93.58;VDB=0.196306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V253A|917|LOC_Os07g18340|protein_coding|CODING|LOC_Os07g18340.1|2|1) FN1471-S.SNP.7:10870634 chr07:010870634 0 W/10870634-10870634 FN1471-S SNP T -> A AC=1;AN=188;BQB=0.932859;DP=2632;DP4=1382,1217,15,5;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0790274;MQB=0.32853;MQSB=0.000954891;RPB=0.519406;SGB=60.7873;VDB=0.529761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.7:10877132 chr07:010877132 0 W/10877132-10877132 FN2423 SNP G -> A AC=2;AN=200;BQB=0.999796;DP=4911;DP4=2395,2235,28,22;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0122175;MQB=2.72752e-14;MQSB=5.97497e-08;RPB=0.989781;SGB=115.456;VDB=0.410792;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.7:10881142 chr07:010881142 0 W/10881142-10881142 FN3798-S SNP T -> C AC=2;AN=190;BQB=0.9774;DP=2635;DP4=1158,1285,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000379507;MQB=8.63332e-13;MQSB=0.245334;RPB=0.908762;SGB=46.6446;VDB=0.449174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C743R|1340|LOC_Os07g18360|protein_coding|CODING|LOC_Os07g18360.1|5|1) FN1071-S.SNP.7:10884896 chr07:010884896 0 W/10884896-10884896 FN1071-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g18370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1346-S.SNP.7:10886937 chr07:010886937 0 W/10886937-10886937 FN1346-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2433.SNP.7:10894548 chr07:010894548 0 W/10894548-10894548 FN2433 SNP G -> T AC=1;AN=200;BQB=0.228781;DP=4225;DP4=2610,1347,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23155e-07;MQSB=0.00231714;RPB=0.53282;SGB=49.6594;VDB=0.395593;EFF=INTRON(MODIFIER||||368|LOC_Os07g18390|protein_coding|CODING|LOC_Os07g18390.1|1|1) FN1346-S.SNP.7:10896277 chr07:010896277 0 W/10896277-10896277 FN1346-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1346-S.SNP.7:10896279 chr07:010896279 0 W/10896279-10896279 FN1346-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1346-S.SNP.7:10896280 chr07:010896280 0 W/10896280-10896280 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2273-S.SNP.7:10896600 chr07:010896600 0 W/10896600-10896600 FN2273-S SNP C -> T AC=1;AN=190;BQB=0.823491;DP=4910;DP4=2230,2384,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000407332;MQB=5.94813e-08;MQSB=0.953968;RPB=0.89031;SGB=53.6492;VDB=0.815149;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.7:10900669 chr07:010900669 0 W/10900669-10900669 FN-189 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g18410 retrotransposon protein, putative, unclassified, expressed SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN995-S.SNP.7:10902128 chr07:010902128 0 W/10902128-10902128 FN995-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g18420 retrotransposon protein, putative, unclassified, expressed SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN552-S.SNP.7:10906465 chr07:010906465 0 W/10906465-10906465 FN552-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g18430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN3470-S.SNP.7:10906639 chr07:010906639 0 W/10906639-10906639 FN3470-S SNP C -> T AC=1;AN=184;BQB=0.987735;DP=2978;DP4=1404,1482,14,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.06835e-14;MQSB=0.32603;RPB=0.75536;SGB=81.5311;VDB=0.841286;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L83|311|LOC_Os07g18430|protein_coding|CODING|LOC_Os07g18430.1|1|1) FN869-S.SNP.7:10907450 chr07:010907450 0 W/10907450-10907450 FN869-S Single Base Substitution G-A INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN3776-S.SNP.7:10907635 chr07:010907635 0 W/10907635-10907635 FN3776-S SNP G -> A AC=1;AN=190;BQB=0.986689;DP=2955;DP4=1557,1262,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.83556e-10;MQSB=0.67244;RPB=0.898824;SGB=46.7622;VDB=0.435229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.7:10907825 chr07:010907825 0 W/10907825-10907825 FN1409-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g18440 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN3851-S.SNP.7:10917409 chr07:010917409 0 W/10917409-10917409 FN3851-S SNP T -> C AC=2;AN=158;BQB=0.999997;DP=2656;DP4=1233,1310,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.33242e-15;MQSB=0.987348;RPB=0.990679;SGB=108.239;VDB=0.403065;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.7:10918288 chr07:010918288 0 W/10918288-10918288 FN996-S Single Base Substitution A-G INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN2242-S.SNP.7:10918743 chr07:010918743 0 W/10918743-10918743 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.0174935;DP=4609;DP4=2153,2183,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.7325e-09;MQSB=0.987404;RPB=0.275332;SGB=-10.4526;VDB=0.411228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.7:10923291 chr07:010923291 0 W/10923291-10923291 FN-172 Single Base Substitution T-G INTRON HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN_812-4-1.SNP.7:10925483 chr07:010925483 0 W/10925483-10925483 FN_812-4-1 Single Base Substitution A-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2591-S.SNP.7:10926661 chr07:010926661 0 W/10926661-10926661 FN2591-S SNP G -> A AC=1;AN=194;BQB=0.685864;DP=4160;DP4=1785,2206,5,7;HOB=5.31406e-05;ICB=0.000106829;MQ=48;MQ0F=0;MQB=1.08565e-05;MQSB=0.747248;RPB=0.212371;SGB=16.3688;VDB=0.277085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.7:10936025 chr07:010936025 0 W/10936025-10936025 FN3292-S SNP A -> T AC=1;AN=184;BQB=0.328038;DP=3061;DP4=1427,1465,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33457e-05;MQSB=0.967795;RPB=0.988056;SGB=39.2697;VDB=0.808233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.7:10938553 chr07:010938553 0 W/10938553-10938553 FN2673-S SNP T -> A AC=2;AN=200;BQB=0.68955;DP=3346;DP4=1692,1321,21,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.25772e-15;MQSB=0.983911;RPB=0.665383;SGB=-4.63785;VDB=0.919979;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.7:10940120 chr07:010940120 0 W/10940120-10940120 FN1662-S Single Base Substitution T-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN552-S.SNP.7:10953197 chr07:010953197 0 W/10953197-10953197 FN552-S Single Base Substitution A-T INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN4065-S.SNP.7:10955510 chr07:010955510 0 W/10955510-10955510 FN4065-S SNP C -> T AC=1;AN=168;BQB=0.999418;DP=3645;DP4=1534,1997,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.9822e-09;MQSB=0.403751;RPB=0.920827;SGB=65.4653;VDB=0.155665;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G111S|471|LOC_Os07g18510|protein_coding|CODING|LOC_Os07g18510.1|1|1) FN1214-S.SNP.7:10961442 chr07:010961442 0 W/10961442-10961442 FN1214-S Single Base Substitution C-T INTRON HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2169-S.SNP.7:10961947 chr07:010961947 0 W/10961947-10961947 FN2169-S SNP G -> A AC=1;AN=168;BQB=0.172629;DP=3368;DP4=1778,1557,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.228919;MQB=0.915133;MQSB=0.374083;RPB=0.343067;SGB=1.32907;VDB=0.508984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T79M|781|LOC_Os07g18520|protein_coding|CODING|LOC_Os07g18520.1|1|1) FN3912-S.SNP.7:10963406 chr07:010963406 0 W/10963406-10963406 FN3912-S SNP T -> C AC=2;AN=158;BQB=0.72382;DP=1487;DP4=973,463,9,6;HOB=0.024996;ICB=0.493752;MQ=34;MQ0F=0.0753194;MQB=0.999087;MQSB=0.639289;RPB=0.6472;SGB=40.8124;VDB=0.364549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.7:10964592 chr07:010964592 0 W/10964592-10964592 FN-306 Single Base Substitution G-A INTERGENIC HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-154.SNP.7:10965631 chr07:010965631 0 W/10965631-10965631 FN-154 Single Base Substitution G-A INTRON HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN4312-S.SNP.7:10965804 chr07:010965804 0 W/10965804-10965804 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.586821;DP=2490;DP4=1115,1311,1,7;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0429719;MQB=0.999637;MQSB=0.00519105;RPB=0.963589;SGB=30.1021;VDB=0.471462;EFF=SPLICE_SITE_REGION(LOW||||762|LOC_Os07g18530|protein_coding|CODING|LOC_Os07g18530.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L564|762|LOC_Os07g18530|protein_coding|CODING|LOC_Os07g18530.1|4|1) FN2253-S.SNP.7:10975437 chr07:010975437 0 W/10975437-10975437 FN2253-S SNP C -> T AC=1;AN=190;BQB=0.0254138;DP=5013;DP4=2167,2512,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.00883091;MQSB=0.440883;RPB=0.740241;SGB=-17.653;VDB=0.662696;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L57|72|LOC_Os07g18550|protein_coding|CODING|LOC_Os07g18550.1|2|1) FN3301-S.SNP.7:10982186 chr07:010982186 0 W/10982186-10982186 FN3301-S SNP T -> A AC=1;AN=184;BQB=0.993382;DP=2854;DP4=1456,1273,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.70667e-11;MQSB=0.908219;RPB=0.986499;SGB=8.32411;VDB=0.928632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.7:10983089 chr07:010983089 0 W/10983089-10983089 FN3804-S SNP A -> G AC=1;AN=190;BQB=0.491028;DP=2770;DP4=1107,1523,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1914e-07;MQSB=0.781333;RPB=0.999699;SGB=57.4238;VDB=0.497758;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.7:10998226 chr07:010998226 0 W/10998226-10998226 FN446-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g18610 OsFBLD7 - F-box, LRR and FBD domain containing protein, expressed SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2498.SNP.7:10998431 chr07:010998431 0 W/10998431-10998431 FN2498 SNP A -> T AC=1;AN=200;BQB=0.532674;DP=3852;DP4=1739,1566,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.30295e-10;MQSB=0.613702;RPB=0.815708;SGB=61.9006;VDB=0.517372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K130M|488|LOC_Os07g18610|protein_coding|CODING|LOC_Os07g18610.1|1|1) FN4111-S.SNP.7:11000119 chr07:011000119 0 W/11000119-11000119 FN4111-S SNP C -> A AC=1;AN=182;BQB=0.747165;DP=3476;DP4=1949,1414,2,25;HOB=6.03792e-05;ICB=0.000121422;MQ=24;MQ0F=0.273303;MQB=0.000108555;MQSB=0;RPB=0.448583;SGB=116.285;VDB=0.952881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.7:11026779 chr07:011026779 0 W/11026779-11026779 FN3536-S SNP A -> T AC=1;AN=188;BQB=0.914394;DP=2445;DP4=1134,1256,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.32264e-05;MQSB=0.957922;RPB=0.891822;SGB=8.27326;VDB=0.571577;EFF=INTRON(MODIFIER||||143|LOC_Os07g18660|protein_coding|CODING|LOC_Os07g18660.1|4|1) FN3547-S.SNP.7:11032501 chr07:011032501 0 W/11032501-11032501 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.970547;DP=2644;DP4=1324,1242,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.00958e-05;MQSB=0.956879;RPB=0.810319;SGB=25.3545;VDB=0.654733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.7:11038583 chr07:011038583 0 W/11038583-11038583 FN2234-S SNP G -> T AC=1;AN=190;BQB=0.946153;DP=4983;DP4=2486,2244,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=9.35864e-06;MQSB=0.955196;RPB=0.98274;SGB=23.6597;VDB=0.228799;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T68|197|LOC_Os07g18680|protein_coding|CODING|LOC_Os07g18680.1|2|1) FN1423-S.SNP.7:11040415 chr07:011040415 0 W/11040415-11040415 FN1423-S Single Base Substitution C-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4235-S.SNP.7:11046826 chr07:011046826 0 W/11046826-11046826 FN4235-S SNP G -> T AC=2;AN=170;BQB=0.973974;DP=2498;DP4=1154,1269,7,17;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.021217;MQB=1.33438e-09;MQSB=0.00372128;RPB=0.739054;SGB=101.184;VDB=0.659401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D48E|1245|LOC_Os07g18690|protein_coding|CODING|LOC_Os07g18690.1|2|1) FN1423-S.SNP.7:11048634 chr07:011048634 0 W/11048634-11048634 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.7:11048634 chr07:011048634 0 W/11048634-11048634 FN1433-S Single Base Substitution C-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1423-S.SNP.7:11048637 chr07:011048637 0 W/11048637-11048637 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.7:11048637 chr07:011048637 0 W/11048637-11048637 FN1433-S Single Base Substitution G-A INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1423-S.SNP.7:11048638 chr07:011048638 0 W/11048638-11048638 FN1423-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.7:11048638 chr07:011048638 0 W/11048638-11048638 FN1433-S Single Base Substitution G-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN-277.SNP.7:11070203 chr07:011070203 0 W/11070203-11070203 FN-277 Single Base Substitution C-T INTRON HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3848-S.SNP.7:11077848 chr07:011077848 0 W/11077848-11077848 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.987581;DP=3213;DP4=1690,1424,13,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.12258e-07;MQSB=0.605696;RPB=0.655883;SGB=64.5449;VDB=0.754445;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.7:11081193 chr07:011081193 0 W/11081193-11081193 FN-379 Single Base Substitution C-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN404-S.SNP.7:11084430 chr07:011084430 0 W/11084430-11084430 FN404-S Single Base Substitution C-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3500-S.SNP.7:11084908 chr07:011084908 0 W/11084908-11084908 FN3500-S SNP A -> C AC=2;AN=188;BQB=0.9796;DP=2837;DP4=1219,1305,15,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.92e-14;MQSB=0.835862;RPB=0.145152;SGB=-118.378;VDB=0.848395;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.7:11084936 chr07:011084936 0 W/11084936-11084936 FN3804-S SNP G -> A AC=1;AN=188;BQB=0.998927;DP=2331;DP4=1196,1041,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.20204e-10;MQSB=0.99287;RPB=0.949694;SGB=76.4186;VDB=0.0279841;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.7:11085123 chr07:011085123 0 W/11085123-11085123 FN2114-S SNP G -> T AC=1;AN=168;BQB=0.90284;DP=2531;DP4=1264,1218,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.00122114;MQSB=0.664468;RPB=0.418179;SGB=-2.96336;VDB=0.292426;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.7:11086266 chr07:011086266 0 W/11086266-11086266 FN846-S Single Base Substitution C-T INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3555-S.SNP.7:11092250 chr07:011092250 0 W/11092250-11092250 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.983297;DP=2811;DP4=1331,1418,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.36004e-07;MQSB=0.995805;RPB=0.367555;SGB=35.9843;VDB=0.126368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.7:11092788 chr07:011092788 0 W/11092788-11092788 FN2335 SNP T -> G AC=1;AN=192;BQB=0.966276;DP=5304;DP4=2213,2803,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.08292e-18;MQSB=0.883429;RPB=0.847566;SGB=100.374;VDB=0.160974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.7:11096126 chr07:011096126 0 W/11096126-11096126 FN1711-S SNP C -> T AC=2;AN=188;BQB=0.815354;DP=3003;DP4=1206,1758,12,17;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.030636;MQB=1.0292e-06;MQSB=1.35439e-13;RPB=0.206546;SGB=-7.93693;VDB=0.140859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P706L|752|LOC_Os07g18760|protein_coding|CODING|LOC_Os07g18760.1|2|1) FN1505-S.SNP.7:11104999 chr07:011104999 0 W/11104999-11104999 FN1505-S Single Base Substitution A-C INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2487.SNP.7:11105879 chr07:011105879 0 W/11105879-11105879 FN2487 SNP C -> T AC=2;AN=200;BQB=0.642603;DP=3681;DP4=1642,1644,14,12;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0296115;MQB=3.9498e-05;MQSB=0.953663;RPB=0.89579;SGB=114.132;VDB=0.490627;EFF=INTERGENIC(MODIFIER||||||||||1) FN-60.SNP.7:11113080 chr07:011113080 0 W/11113080-11113080 FN-60 Single Base Substitution T-G INTRON HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN703-S.SNP.7:11113504 chr07:011113504 0 W/11113504-11113504 FN703-S Single Base Substitution A-C INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2463.SNP.7:11117986 chr07:011117986 0 W/11117986-11117986 FN2463 SNP T -> C AC=1;AN=200;BQB=0.954047;DP=4705;DP4=2223,2100,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01416e-06;MQSB=0.961234;RPB=0.752368;SGB=49.6594;VDB=0.986487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.7:11119572 chr07:011119572 0 W/11119572-11119572 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.999807;DP=3580;DP4=2113,1286,20,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00251397;MQB=0.000504014;MQSB=0.0199697;RPB=0.0626554;SGB=85.0529;VDB=0.238169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.7:11121914 chr07:011121914 0 W/11121914-11121914 FN1204-S Single Base Substitution T-A INTRON HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN908-S.SNP.7:11126670 chr07:011126670 0 W/11126670-11126670 FN908-S Single Base Substitution A-G INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1717-S.SNP.7:11130433 chr07:011130433 0 W/11130433-11130433 FN1717-S SNP G -> A AC=1;AN=188;BQB=0.982396;DP=3890;DP4=2022,1837,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.98113e-10;MQSB=0.870752;RPB=0.397298;SGB=36.2493;VDB=0.160478;EFF=INTRON(MODIFIER||||235|LOC_Os07g18800|protein_coding|CODING|LOC_Os07g18800.1|1|1) FN3662-S.SNP.7:11136434 chr07:011136434 0 W/11136434-11136434 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.796802;DP=3005;DP4=1491,1430,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.65569e-08;MQSB=0.998978;RPB=0.00178545;SGB=58.2031;VDB=0.00936448;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.7:11138938 chr07:011138938 0 W/11138938-11138938 FN1024-S Single Base Substitution A-G INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1056-S.SNP.7:11143768 chr07:011143768 0 W/11143768-11143768 FN1056-S Single Base Substitution G-A INTERGENIC HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN1236-S.SNP.7:11143768 chr07:011143768 0 W/11143768-11143768 FN1236-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1552-S.SNP.7:11143768 chr07:011143768 0 W/11143768-11143768 FN1552-S SNP G -> A AC=1;AN=188;BQB=0.219266;DP=3678;DP4=1856,1786,18,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.16853e-11;MQSB=0.945665;RPB=0.990472;SGB=-157.8;VDB=0.346594;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.7:11143768 chr07:011143768 0 W/11143768-11143768 FN445-S Single Base Substitution G-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-119.SNP.7:11145735 chr07:011145735 0 W/11145735-11145735 FN-119 Single Base Substitution G-A INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1686-S.SNP.7:11155021 chr07:011155021 0 W/11155021-11155021 FN1686-S SNP C -> G AC=2;AN=188;BQB=0.26906;DP=3302;DP4=1587,1679,11,15;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0523925;MQB=6.91857e-05;MQSB=2.74097e-10;RPB=0.773637;SGB=-70.6427;VDB=0.387982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P618R|1029|LOC_Os07g18840|protein_coding|CODING|LOC_Os07g18840.1|9|1) FN948-S.SNP.7:11160311 chr07:011160311 0 W/11160311-11160311 FN948-S Single Base Substitution A-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3697-S.SNP.7:11162149 chr07:011162149 0 W/11162149-11162149 FN3697-S SNP A -> T AC=1;AN=190;BQB=0.985601;DP=3045;DP4=1505,1412,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000328407;MQB=2.37048e-08;MQSB=0.662303;RPB=0.312332;SGB=39.6545;VDB=0.21862;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.7:11168588 chr07:011168588 0 W/11168588-11168588 FN4138-S SNP C -> T AC=1;AN=170;BQB=0.914329;DP=2548;DP4=1205,1270,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0;MQB=0.0015232;MQSB=0.956393;RPB=0.0988536;SGB=34.5445;VDB=0.407048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.7:11170206 chr07:011170206 0 W/11170206-11170206 FN3578-S SNP G -> C AC=1;AN=188;BQB=0.967251;DP=2622;DP4=1596,938,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=3.66549e-08;MQSB=0.197357;RPB=0.99616;SGB=53.5223;VDB=0.801047;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.7:11171097 chr07:011171097 0 W/11171097-11171097 FN_789-2-1 Single Base Substitution C-T Homo LOC_Os07g18874 white-brown complex homolog protein 11, putative, expressed SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1056-S.SNP.7:11172830 chr07:011172830 0 W/11172830-11172830 FN1056-S Single Base Substitution C-A INTRON HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN2532-S.SNP.7:11174262 chr07:011174262 0 W/11174262-11174262 FN2532-S SNP G -> T AC=1;AN=198;BQB=0.200214;DP=3751;DP4=1901,1620,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.90593e-07;MQSB=0.512989;RPB=0.170816;SGB=-15.6211;VDB=0.20996;EFF=INTRON(MODIFIER||||729|LOC_Os07g18874|protein_coding|CODING|LOC_Os07g18874.1|1|1) FN2437.SNP.7:11186340 chr07:011186340 0 W/11186340-11186340 FN2437 SNP T -> C AC=1;AN=200;BQB=0.924261;DP=4994;DP4=2492,2290,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.02454e-08;MQSB=0.972126;RPB=0.187945;SGB=49.6594;VDB=0.349734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.7:11189966 chr07:011189966 0 W/11189966-11189966 FN1288-S Single Base Substitution T-G INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN-272.SNP.7:11195557 chr07:011195557 0 W/11195557-11195557 FN-272 Single Base Substitution C-A STOP_GAINED HET LOC_Os07g18890 retrotransposon protein, putative, unclassified, expressed SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1497-S.SNP.7:11198254 chr07:011198254 0 W/11198254-11198254 FN1497-S Single Base Substitution G-A INTERGENIC Homo SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1515-S.SNP.7:11198268 chr07:011198268 0 W/11198268-11198268 FN1515-S Single Base Substitution G-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1696-S.SNP.7:11202462 chr07:011202462 0 W/11202462-11202462 FN1696-S SNP C -> T AC=1;AN=188;BQB=0.530961;DP=2945;DP4=1446,1471,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000167381;MQSB=0.925375;RPB=0.720834;SGB=-34.1676;VDB=0.744065;EFF=INTRON(MODIFIER||||335|LOC_Os07g18900|protein_coding|CODING|LOC_Os07g18900.1|3|1) FN-403.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN-403 Single Base Substitution G-A INTRON HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN1074-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN1074-S Single Base Substitution G-A INTRON HET SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN1420-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN1420-S Single Base Substitution G-A INTRON HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1759-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN1759-S SNP G -> A AC=2;AN=188;BQB=0.99784;DP=3127;DP4=1784,1273,21,19;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.81924e-12;MQSB=0.698828;RPB=0.991789;SGB=-91.0366;VDB=0.388201;EFF=INTRON(MODIFIER||||335|LOC_Os07g18900|protein_coding|CODING|LOC_Os07g18900.1|5|1) FN2239-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.375499;DP=4934;DP4=2498,2092,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000202675;MQB=6.87984e-07;MQSB=0.0315358;RPB=0.258504;SGB=7.21887;VDB=0.338591;EFF=INTRON(MODIFIER||||335|LOC_Os07g18900|protein_coding|CODING|LOC_Os07g18900.1|5|1) FN472-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN472-S Single Base Substitution G-A INTRON HOMO SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN865-S.SNP.7:11202939 chr07:011202939 0 W/11202939-11202939 FN865-S Single Base Substitution G-A INTRON HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1704-S.SNP.7:11203831 chr07:011203831 0 W/11203831-11203831 FN1704-S SNP T -> C AC=1;AN=188;BQB=0.0476779;DP=3789;DP4=1949,1799,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.61767e-06;MQSB=0.979275;RPB=0.346572;SGB=-58.9891;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.7:11204872 chr07:011204872 0 W/11204872-11204872 FN2383 SNP G -> A AC=1;AN=192;BQB=0.101741;DP=4593;DP4=2198,2012,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000217723;MQB=1.09741e-10;MQSB=0.218329;RPB=0.721392;SGB=18.3052;VDB=0.612977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P41L|166|LOC_Os07g18910|protein_coding|CODING|LOC_Os07g18910.1|1|1) FN1737-S.SNP.7:11208368 chr07:011208368 0 W/11208368-11208368 FN1737-S SNP G -> A AC=2;AN=188;BQB=0.771924;DP=2254;DP4=952,1260,9,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.92657e-13;MQSB=0.722825;RPB=0.620413;SGB=22.5144;VDB=0.409462;EFF=INTRON(MODIFIER||||775|LOC_Os07g18920|protein_coding|CODING|LOC_Os07g18920.1|1|1) FN-141.SNP.7:11210055 chr07:011210055 0 W/11210055-11210055 FN-141 Single Base Substitution C-T INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN4230-S.SNP.7:11222429 chr07:011222429 0 W/11222429-11222429 FN4230-S SNP T -> G AC=1;AN=170;BQB=0.821509;DP=2555;DP4=1191,1312,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00469667;MQB=0.00013629;MQSB=0.436635;RPB=0.938325;SGB=34.5445;VDB=0.782803;EFF=UTR_3_PRIME(MODIFIER||386||80|LOC_Os07g18944|protein_coding|CODING|LOC_Os07g18944.1|2|1) FN-186.SNP.7:11235605 chr07:011235605 0 W/11235605-11235605 FN-186 Single Base Substitution G-A INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2730-S.SNP.7:11238581 chr07:011238581 0 W/11238581-11238581 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.889527;DP=4288;DP4=1816,2130,9,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000440273;MQSB=0.00947085;RPB=0.793744;SGB=16.4591;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.7:11239727 chr07:011239727 0 W/11239727-11239727 W598-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1615-S.SNP.7:11249142 chr07:011249142 0 W/11249142-11249142 FN1615-S Single Base Substitution G-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1614-S.SNP.7:11251124 chr07:011251124 0 W/11251124-11251124 FN1614-S Single Base Substitution C-A INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-169.SNP.7:11252901 chr07:011252901 0 W/11252901-11252901 FN-169 Single Base Substitution G-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1108-S.SNP.7:11253352 chr07:011253352 0 W/11253352-11253352 FN1108-S Single Base Substitution G-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1596-S.SNP.7:11259086 chr07:011259086 0 W/11259086-11259086 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN-231.SNP.7:11260739 chr07:011260739 0 W/11260739-11260739 FN-231 Single Base Substitution C-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN986-S.SNP.7:11261915 chr07:011261915 0 W/11261915-11261915 FN986-S Single Base Substitution G-A INTRON HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN4148-S.SNP.7:11265612 chr07:011265612 0 W/11265612-11265612 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.918775;DP=2416;DP4=1406,955,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.76383e-07;MQSB=0.981878;RPB=0.477403;SGB=31.4354;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.7:11270009 chr07:011270009 0 W/11270009-11270009 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.836873;DP=2845;DP4=1360,1369,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.89598e-07;MQSB=0.946821;RPB=0.61914;SGB=18.2315;VDB=0.156529;EFF=INTRON(MODIFIER||||292|LOC_Os07g19030|protein_coding|CODING|LOC_Os07g19030.1|1|1) FN2247-S.SNP.7:11279068 chr07:011279068 0 W/11279068-11279068 FN2247-S SNP A -> G AC=1;AN=190;BQB=0.888491;DP=4752;DP4=2311,2004,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.4311e-09;MQSB=0.933036;RPB=0.357758;SGB=31.3213;VDB=0.185927;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.7:11279535 chr07:011279535 0 W/11279535-11279535 FN2296 SNP C -> T AC=2;AN=192;BQB=0.612351;DP=5194;DP4=2345,2591,23,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.04818e-27;MQSB=0.937564;RPB=0.379704;SGB=110.973;VDB=0.442037;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.7:11280632 chr07:011280632 0 W/11280632-11280632 W577-3-1 Single Base Substitution G-A UTR_3_PRIME HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2687-S.SNP.7:11293103 chr07:011293103 0 W/11293103-11293103 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.893734;DP=4692;DP4=2355,2117,8,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.06435e-05;MQSB=0.403116;RPB=0.488514;SGB=21.6694;VDB=0.998079;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.7:11296287 chr07:011296287 0 W/11296287-11296287 FN-111 Single Base Substitution G-A INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN-111.SNP.7:11296288 chr07:011296288 0 W/11296288-11296288 FN-111 Single Base Substitution C-T INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1230-S.SNP.7:11297459 chr07:011297459 0 W/11297459-11297459 FN1230-S Single Base Substitution G-A INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1475-S.SNP.7:11297541 chr07:011297541 0 W/11297541-11297541 FN1475-S Single Base Substitution T-C INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3330-S.SNP.7:11297922 chr07:011297922 0 W/11297922-11297922 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.935586;DP=3647;DP4=1891,1654,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.00411297;MQB=0.00266302;MQSB=0.187922;RPB=0.998152;SGB=48.7425;VDB=0.338575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.7:11300157 chr07:011300157 0 W/11300157-11300157 FN3650-S SNP G -> T AC=2;AN=190;BQB=0.860122;DP=3141;DP4=1510,1414,27,23;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0063674;MQB=7.28635e-13;MQSB=8.02239e-27;RPB=0.388032;SGB=157.557;VDB=0.291765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.7:11305134 chr07:011305134 0 W/11305134-11305134 FN2593-S SNP C -> A AC=1;AN=186;BQB=0.932771;DP=4306;DP4=2170,1884,18,17;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.000232234;MQB=7.26853e-13;MQSB=2.29549e-05;RPB=0.703738;SGB=36.4664;VDB=0.415004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.7:11306933 chr07:011306933 0 W/11306933-11306933 FN1184-S Single Base Substitution G-A INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN519-S.SNP.7:11312094 chr07:011312094 0 W/11312094-11312094 FN519-S Single Base Substitution G-A INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN360-S.SNP.7:11315069 chr07:011315069 0 W/11315069-11315069 FN360-S Single Base Substitution G-A INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1665-S.SNP.7:11317925 chr07:011317925 0 W/11317925-11317925 FN1665-S Single Base Substitution A-G INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2708-S.SNP.7:11327689 chr07:011327689 0 W/11327689-11327689 FN2708-S SNP T -> A AC=1;AN=200;BQB=0.997898;DP=5021;DP4=2519,2291,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.0909e-13;MQSB=0.996064;RPB=0.737942;SGB=69.1109;VDB=0.370007;EFF=INTRON(MODIFIER||||220|LOC_Os07g19130|protein_coding|CODING|LOC_Os07g19130.1|1|1) FN2282.SNP.7:11335888 chr07:011335888 0 W/11335888-11335888 FN2282 SNP G -> A AC=1;AN=192;BQB=0.985115;DP=4737;DP4=2266,2216,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000211104;MQB=4.98108e-13;MQSB=0.710492;RPB=0.913252;SGB=82.5522;VDB=0.135891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.7:11342904 chr07:011342904 0 W/11342904-11342904 FN2541-S SNP C -> T AC=1;AN=198;BQB=0.998253;DP=3213;DP4=1331,1599,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.000311236;MQB=0.00340071;MQSB=1.27026e-05;RPB=0.854287;SGB=61.7198;VDB=0.0426678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.7:11345905 chr07:011345905 0 W/11345905-11345905 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.959136;DP=4931;DP4=2333,2310,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202799;MQB=7.70734e-09;MQSB=0.852421;RPB=0.966212;SGB=53.8699;VDB=0.700605;EFF=INTRON(MODIFIER||||142|LOC_Os07g19170|protein_coding|CODING|LOC_Os07g19170.1|2|1) FN242-S.SNP.7:11347787 chr07:011347787 0 W/11347787-11347787 FN242-S Single Base Substitution G-T INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN1424-S.SNP.7:11352522 chr07:011352522 0 W/11352522-11352522 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3964-S.SNP.7:11360508 chr07:011360508 0 W/11360508-11360508 FN3964-S SNP G -> A AC=2;AN=168;BQB=0.997541;DP=2364;DP4=1091,1147,20,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.45653e-22;MQSB=0.990171;RPB=0.530214;SGB=170.872;VDB=0.958956;EFF=INTRON(MODIFIER||||163|LOC_Os07g19190|protein_coding|CODING|LOC_Os07g19190.1|1|1) FN4312-S.SNP.7:11368122 chr07:011368122 0 W/11368122-11368122 FN4312-S SNP G -> T AC=1;AN=170;BQB=0.968031;DP=2359;DP4=1184,1122,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00932599;MQB=2.68032e-07;MQSB=0.98065;RPB=0.456815;SGB=41.7633;VDB=0.00474531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R134M|1220|LOC_Os07g19200|protein_coding|CODING|LOC_Os07g19200.1|1|1) FN962-S.SNP.7:11370323 chr07:011370323 0 W/11370323-11370323 FN962-S Single Base Substitution A-C INTRON HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3799-S.SNP.7:11374772 chr07:011374772 0 W/11374772-11374772 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.945721;DP=2586;DP4=1349,1165,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000253076;MQSB=0.641888;RPB=0.259223;SGB=30.8803;VDB=0.320835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H1120Y|1220|LOC_Os07g19200|protein_coding|CODING|LOC_Os07g19200.1|6|1) FN2301.SNP.7:11385097 chr07:011385097 0 W/11385097-11385097 FN2301 SNP C -> T AC=1;AN=192;BQB=0.860156;DP=5009;DP4=2565,2176,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.73381e-13;MQSB=0.884608;RPB=0.85782;SGB=13.6122;VDB=0.143518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.7:11387086 chr07:011387086 0 W/11387086-11387086 FN3674-S SNP T -> C AC=2;AN=190;BQB=0.987719;DP=2690;DP4=1643,933,16,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.49618e-12;MQSB=0.71603;RPB=0.454962;SGB=90.0802;VDB=0.787978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.7:11389320 chr07:011389320 0 W/11389320-11389320 FN2664-S SNP G -> C AC=1;AN=200;BQB=0.866002;DP=4579;DP4=1967,2409,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45794e-05;MQSB=0.345232;RPB=0.285955;SGB=40.4492;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2595-S.SNP.7:11390747 chr07:011390747 0 W/11390747-11390747 FN2595-S SNP A -> G AC=1;AN=198;BQB=0.319864;DP=4086;DP4=1897,1843,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00391581;MQB=5.10552e-10;MQSB=7.37745e-05;RPB=0.931682;SGB=-39.0698;VDB=0.191871;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.7:11406390 chr07:011406390 0 W/11406390-11406390 FN-379 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1326-S.SNP.7:11408024 chr07:011408024 0 W/11408024-11408024 FN1326-S Single Base Substitution C-T INTRON HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1020-S.SNP.7:11408494 chr07:011408494 0 W/11408494-11408494 FN1020-S Single Base Substitution T-C INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN-218.SNP.7:11410226 chr07:011410226 0 W/11410226-11410226 FN-218 Single Base Substitution G-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3857-S.SNP.7:11413747 chr07:011413747 0 W/11413747-11413747 FN3857-S SNP C -> A AC=1;AN=158;BQB=0.859439;DP=2436;DP4=1147,1206,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.80927e-08;MQSB=0.209795;RPB=0.975333;SGB=51.4366;VDB=0.436745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.7:11415717 chr07:011415717 0 W/11415717-11415717 FN2326 SNP C -> T AC=1;AN=192;BQB=0.700573;DP=5004;DP4=2187,2538,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00219824;MQB=7.09392e-09;MQSB=0.612918;RPB=0.473796;SGB=-35.7635;VDB=0.676684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.7:11419413 chr07:011419413 0 W/11419413-11419413 FN2246-S SNP C -> G AC=2;AN=190;BQB=0.908757;DP=4501;DP4=2261,1863,25,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.72079e-22;MQSB=0.207661;RPB=0.973343;SGB=181.158;VDB=0.460159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T363R|403|LOC_Os07g19290|protein_coding|CODING|LOC_Os07g19290.1|3|1) FN1152-S.SNP.7:11423760 chr07:011423760 0 W/11423760-11423760 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN-285.SNP.7:11431290 chr07:011431290 0 W/11431290-11431290 FN-285 Single Base Substitution G-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN497-S.SNP.7:11432670 chr07:011432670 0 W/11432670-11432670 FN497-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g19320 stripe rust resistance protein Yr10, putative, expressed SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2467.SNP.7:11438174 chr07:011438174 0 W/11438174-11438174 FN2467 SNP A -> C AC=1;AN=200;BQB=0.841523;DP=4198;DP4=1757,1953,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09155e-12;MQSB=0.796493;RPB=0.525476;SGB=-66.6795;VDB=0.725151;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A96|221|LOC_Os07g19330|protein_coding|CODING|LOC_Os07g19330.1|1|1) FN1484-S.SNP.7:11442366 chr07:011442366 0 W/11442366-11442366 FN1484-S Single Base Substitution T-C INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN3732-S.SNP.7:11443209 chr07:011443209 0 W/11443209-11443209 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.806004;DP=3046;DP4=1503,1402,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.02723e-11;MQSB=0.833604;RPB=0.398052;SGB=41.5369;VDB=0.38225;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.7:11444021 chr07:011444021 0 W/11444021-11444021 FN1446-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN3740-S.SNP.7:11449406 chr07:011449406 0 W/11449406-11449406 FN3740-S SNP T -> G AC=2;AN=190;BQB=0.660971;DP=2873;DP4=1337,1367,15,12;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=5.11358e-13;MQSB=0.999352;RPB=0.90831;SGB=54.3062;VDB=0.984595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.7:11456731 chr07:011456731 0 W/11456731-11456731 FN3520-S SNP T -> A AC=1;AN=188;BQB=0.920166;DP=2843;DP4=1481,1253,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.50883e-16;MQSB=0.981008;RPB=0.982855;SGB=135.302;VDB=0.840317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.7:11457781 chr07:011457781 0 W/11457781-11457781 FN3768-S SNP G -> A AC=2;AN=190;BQB=0.992147;DP=2731;DP4=1124,1456,15,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000366166;MQB=2.94135e-12;MQSB=0.564102;RPB=0.8098;SGB=110.732;VDB=0.929507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.7:11459569 chr07:011459569 0 W/11459569-11459569 FN2417 SNP C -> T AC=1;AN=200;BQB=0.456904;DP=4121;DP4=1700,1990,11,6;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0997331;MQB=0.0940278;MQSB=2.95796e-23;RPB=0.149463;SGB=51.0851;VDB=0.260755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.7:11467950 chr07:011467950 0 W/11467950-11467950 FN2731-S SNP G -> C AC=1;AN=200;BQB=0.587887;DP=5080;DP4=2308,2465,18,15;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.051378;MQB=0.319854;MQSB=0;RPB=0.371061;SGB=33.5675;VDB=0.791114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.7:11470728 chr07:011470728 0 W/11470728-11470728 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3607-S.SNP.7:11481459 chr07:011481459 0 W/11481459-11481459 FN3607-S SNP C -> T AC=2;AN=190;BQB=0.985572;DP=2541;DP4=1268,1175,12,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.51923e-13;MQSB=0.998435;RPB=0.932959;SGB=60.9777;VDB=0.777048;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N621|703|LOC_Os07g19400|protein_coding|CODING|LOC_Os07g19400.1|1|1) FN3607-S.SNP.7:11481464 chr07:011481464 0 W/11481464-11481464 FN3607-S SNP A -> T AC=2;AN=190;BQB=0.999865;DP=2534;DP4=1205,1175,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.63537e-12;MQSB=0.98413;RPB=0.916316;SGB=76.4186;VDB=0.381841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y623F|703|LOC_Os07g19400|protein_coding|CODING|LOC_Os07g19400.1|1|1) FN1717-S.SNP.7:11481599 chr07:011481599 0 W/11481599-11481599 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.0241277;DP=3572;DP4=1682,1842,17,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.83045e-08;MQSB=0.969444;RPB=0.106361;SGB=-103.637;VDB=0.310543;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S668L|703|LOC_Os07g19400|protein_coding|CODING|LOC_Os07g19400.1|1|1) FN3849-S.SNP.7:11486890 chr07:011486890 0 W/11486890-11486890 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.719427;DP=2984;DP4=1514,1397,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.30938e-07;MQSB=0.99947;RPB=0.96472;SGB=68.9144;VDB=0.855049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V12I|117|LOC_Os07g19410|protein_coding|CODING|LOC_Os07g19410.1|1|1) FN2373.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN2373 SNP G -> A AC=2;AN=192;BQB=0.179077;DP=5153;DP4=2601,2250,17,22;HOB=0.0206163;ICB=0.494846;MQ=23;MQ0F=0.219096;MQB=0.430233;MQSB=0;RPB=0.518636;SGB=128.889;VDB=0.31778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G221R|420|LOC_Os07g19420|protein_coding|CODING|LOC_Os07g19420.1|2|1) FN2666-S.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN2666-S SNP G -> A AC=2;AN=200;BQB=0.864922;DP=5004;DP4=2474,2233,23,28;HOB=0.0198;ICB=0.495051;MQ=24;MQ0F=0.209432;MQB=0.0456235;MQSB=0;RPB=0.830745;SGB=173.661;VDB=0.422261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G221R|420|LOC_Os07g19420|protein_coding|CODING|LOC_Os07g19420.1|2|1) FN2788-S.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.284997;DP=3775;DP4=1960,1609,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.245828;MQB=0.37822;MQSB=0;RPB=0.806342;SGB=61.7198;VDB=0.836469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G221R|420|LOC_Os07g19420|protein_coding|CODING|LOC_Os07g19420.1|2|1) FN3921-S.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN3921-S SNP G -> A AC=2;AN=158;BQB=0.966312;DP=2654;DP4=1428,1141,7,14;HOB=0.024996;ICB=0.493752;MQ=19;MQ0F=0.294273;MQB=0.869827;MQSB=1.64117e-25;RPB=0.922758;SGB=86.3921;VDB=0.0247001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G221R|420|LOC_Os07g19420|protein_coding|CODING|LOC_Os07g19420.1|2|1) FN499-S.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN499-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g19420 retrotransposon protein, putative, unclassified, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN898-S.SNP.7:11489776 chr07:011489776 0 W/11489776-11489776 FN898-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g19420 retrotransposon protein, putative, unclassified, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2645-S.SNP.7:11512040 chr07:011512040 0 W/11512040-11512040 FN2645-S SNP T -> C AC=1;AN=200;BQB=0.689627;DP=4881;DP4=2497,2175,10,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31045e-16;MQSB=0.822827;RPB=0.461708;SGB=25.5416;VDB=0.948435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.7:11512044 chr07:011512044 0 W/11512044-11512044 FN3713-S SNP C -> T AC=1;AN=190;BQB=0.93688;DP=3016;DP4=1446,1418,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.32485e-09;MQSB=0.57575;RPB=0.176938;SGB=58.2031;VDB=0.0586337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.7:11513048 chr07:011513048 0 W/11513048-11513048 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.824443;DP=4164;DP4=2106,1791,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.80558e-06;MQSB=0.746794;RPB=0.897957;SGB=37.1297;VDB=0.537182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.7:11520561 chr07:011520561 0 W/11520561-11520561 FN3854-S SNP T -> C AC=1;AN=158;BQB=0.884008;DP=2418;DP4=1046,1233,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.45587e-06;MQSB=0.578625;RPB=0.950457;SGB=16.7104;VDB=0.731915;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.7:11523529 chr07:011523529 0 W/11523529-11523529 FN4249-S SNP A -> T AC=1;AN=170;BQB=0.979866;DP=2640;DP4=1169,1378,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.30022e-07;MQSB=0.120491;RPB=0.631612;SGB=56.7575;VDB=0.0583446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.7:11524319 chr07:011524319 0 W/11524319-11524319 FN3417-S SNP G -> A AC=1;AN=184;BQB=0.933971;DP=2237;DP4=1100,1058,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.8212e-05;MQSB=0.999664;RPB=0.660889;SGB=-3.85014;VDB=0.0677205;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.7:11530242 chr07:011530242 0 W/11530242-11530242 FN4304-S SNP C -> T AC=2;AN=170;BQB=0.998136;DP=2515;DP4=1347,1084,16,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.22817e-14;MQSB=0.970426;RPB=0.995568;SGB=105.627;VDB=0.557322;EFF=INTRON(MODIFIER||||403|LOC_Os07g19494|protein_coding|CODING|LOC_Os07g19494.1|4|1) FN1332-S.SNP.7:11532391 chr07:011532391 0 W/11532391-11532391 FN1332-S Single Base Substitution T-C INTRON HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1614-S.SNP.7:11536855 chr07:011536855 0 W/11536855-11536855 FN1614-S Single Base Substitution G-C INTRON HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1329-S.SNP.7:11542260 chr07:011542260 0 W/11542260-11542260 FN1329-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3714-S.SNP.7:11542306 chr07:011542306 0 W/11542306-11542306 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.98682;DP=2943;DP4=1321,1509,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00010196;MQSB=0.772544;RPB=0.116331;SGB=53.6492;VDB=0.520059;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.7:11543019 chr07:011543019 0 W/11543019-11543019 FN1335-S Single Base Substitution C-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1718-S.SNP.7:11553443 chr07:011553443 0 W/11553443-11553443 FN1718-S SNP C -> G AC=1;AN=188;BQB=0.213014;DP=3166;DP4=1370,1759,8,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.03425e-09;MQSB=0.986057;RPB=0.816108;SGB=-9.02352;VDB=0.767359;EFF=INTRON(MODIFIER||||863|LOC_Os07g19530|protein_coding|CODING|LOC_Os07g19530.1|17|1) FN4279-S.SNP.7:11555084 chr07:011555084 0 W/11555084-11555084 FN4279-S SNP C -> T AC=1;AN=170;BQB=0.992304;DP=2573;DP4=1203,1302,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.44422e-08;MQSB=0.876749;RPB=0.736802;SGB=34.878;VDB=0.35295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A655T|863|LOC_Os07g19530|protein_coding|CODING|LOC_Os07g19530.1|17|1),SPLICE_SITE_REGION(LOW||||863|LOC_Os07g19530|protein_coding|CODING|LOC_Os07g19530.1|17|1) FN2670-S.SNP.7:11557878 chr07:011557878 0 W/11557878-11557878 FN2670-S SNP A -> T AC=1;AN=200;BQB=0.999244;DP=4476;DP4=2098,2225,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01227e-12;MQSB=0.9789;RPB=0.197932;SGB=58.2954;VDB=0.198874;EFF=INTRON(MODIFIER||||863|LOC_Os07g19530|protein_coding|CODING|LOC_Os07g19530.1|12|1) FN4090-S.SNP.7:11558537 chr07:011558537 0 W/11558537-11558537 FN4090-S SNP C -> G AC=1;AN=182;BQB=0.656223;DP=3145;DP4=1521,1558,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.51033e-06;MQSB=0.999991;RPB=0.521757;SGB=21.5845;VDB=0.239056;EFF=INTRON(MODIFIER||||863|LOC_Os07g19530|protein_coding|CODING|LOC_Os07g19530.1|11|1) FN573-S.SNP.7:11564987 chr07:011564987 0 W/11564987-11564987 FN573-S Single Base Substitution A-G INTRON HOMO SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1156-S.SNP.7:11571327 chr07:011571327 0 W/11571327-11571327 FN1156-S Single Base Substitution A-T INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3912-S.SNP.7:11579744 chr07:011579744 0 W/11579744-11579744 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.968279;DP=2811;DP4=1398,1313,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.43748e-07;MQSB=0.998092;RPB=0.934634;SGB=11.9715;VDB=0.986785;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.7:11580852 chr07:011580852 0 W/11580852-11580852 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN799-S.SNP.7:11585870 chr07:011585870 0 W/11585870-11585870 FN799-S Single Base Substitution C-A INTERGENIC HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN-252.SNP.7:11591106 chr07:011591106 0 W/11591106-11591106 FN-252 Single Base Substitution A-G INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-180.SNP.7:11594291 chr07:011594291 0 W/11594291-11594291 FN-180 Single Base Substitution T-C INTRON HOMO SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN670-S.SNP.7:11595168 chr07:011595168 0 W/11595168-11595168 FN670-S Single Base Substitution G-T INTRON HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1158-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN1158-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g19570 expressed protein SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2279-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN2279-S SNP T -> A AC=1;AN=190;BQB=0.00368256;DP=2982;DP4=756,1522,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.85491e-07;MQSB=0.0018924;RPB=0.882078;SGB=-246.288;VDB=0.0590035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T10S|119|LOC_Os07g19570|protein_coding|CODING|LOC_Os07g19570.1|1|1) FN2719-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN2719-S SNP T -> A AC=2;AN=200;BQB=0.0387977;DP=4105;DP4=1380,1960,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22848e-13;MQSB=0.78417;RPB=0.994942;SGB=-131.202;VDB=0.958472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T10S|119|LOC_Os07g19570|protein_coding|CODING|LOC_Os07g19570.1|1|1) FN3555-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN3555-S SNP T -> A AC=2;AN=188;BQB=0.973987;DP=4010;DP4=1918,1851,31,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.24335e-26;MQSB=0.999842;RPB=0.980511;SGB=117.635;VDB=0.228301;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T10S|119|LOC_Os07g19570|protein_coding|CODING|LOC_Os07g19570.1|1|1) FN3665-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN3665-S SNP T -> A AC=2;AN=190;BQB=0.999992;DP=1998;DP4=797,1035,25,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.85688e-25;MQSB=0.527882;RPB=0.798161;SGB=143.437;VDB=0.758489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T10S|119|LOC_Os07g19570|protein_coding|CODING|LOC_Os07g19570.1|1|1) FN4063-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN4063-S SNP T -> A AC=2;AN=168;BQB=0.859462;DP=2245;DP4=878,1218,7,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.08022e-11;MQSB=0.989162;RPB=0.993874;SGB=36.7696;VDB=0.317907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T10S|119|LOC_Os07g19570|protein_coding|CODING|LOC_Os07g19570.1|1|1) FN509-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN509-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g19570 expressed protein SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN836-S.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN836-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g19570 expressed protein SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN_812-4-1.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 FN_812-4-1 Single Base Substitution T-A Homo LOC_Os07g19570 expressed protein SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.7:11598160 chr07:011598160 0 W/11598160-11598160 W453-3-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g19570 expressed protein SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN-171.SNP.7:11598344 chr07:011598344 0 W/11598344-11598344 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2767-S.SNP.7:11611151 chr07:011611151 0 W/11611151-11611151 FN2767-S SNP T -> A AC=1;AN=190;BQB=0.41973;DP=3352;DP4=1270,1830,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000298329;MQB=1.15923e-07;MQSB=0.984635;RPB=0.594104;SGB=81.7147;VDB=0.715453;EFF=INTRON(MODIFIER||||678|LOC_Os07g19594|protein_coding|CODING|LOC_Os07g19594.1|4|1) FN-263.SNP.7:11611787 chr07:011611787 0 W/11611787-11611787 FN-263 Single Base Substitution G-T INTRON HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN2216-S.SNP.7:11611795 chr07:011611795 0 W/11611795-11611795 FN2216-S SNP T -> C AC=1;AN=190;BQB=0.464576;DP=5201;DP4=2552,2381,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0144203;MQB=0.652142;MQSB=0.544679;RPB=0.965972;SGB=90.0802;VDB=0.25766;EFF=INTRON(MODIFIER||||678|LOC_Os07g19594|protein_coding|CODING|LOC_Os07g19594.1|4|1) FN2677-S.SNP.7:11615288 chr07:011615288 0 W/11615288-11615288 FN2677-S SNP C -> A AC=1;AN=200;BQB=0.973218;DP=4375;DP4=2028,2024,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50585e-07;MQSB=0.000219602;RPB=0.543387;SGB=47.4799;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.7:11615799 chr07:011615799 0 W/11615799-11615799 FN3919-S SNP C -> T AC=1;AN=158;BQB=0.879466;DP=2380;DP4=1049,1239,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.12706e-10;MQSB=0.959282;RPB=0.366731;SGB=64.5449;VDB=0.0777857;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V34|101|LOC_Os07g20100|protein_coding|CODING|LOC_Os07g20100.1|1|1) FN769-S.SNP.7:11617090 chr07:011617090 0 W/11617090-11617090 FN769-S Single Base Substitution C-T INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2487.SNP.7:11628812 chr07:011628812 0 W/11628812-11628812 FN2487 SNP A -> G AC=1;AN=200;BQB=0.7884;DP=4207;DP4=2006,2013,19,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=9.22621e-17;MQSB=0.190634;RPB=0.266577;SGB=118.737;VDB=0.561843;EFF=UTR_3_PRIME(MODIFIER||652||106|LOC_Os07g20135|protein_coding|CODING|LOC_Os07g20135.1|1|1) FN778-S.SNP.7:11640255 chr07:011640255 0 W/11640255-11640255 FN778-S Single Base Substitution G-A INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3297-S.SNP.7:11644126 chr07:011644126 0 W/11644126-11644126 FN3297-S SNP T -> C AC=2;AN=184;BQB=0.82259;DP=2781;DP4=1276,1333,8,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=9.35939e-10;MQSB=0.925163;RPB=0.989259;SGB=60.4004;VDB=0.700488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F82S|125|LOC_Os07g20164|protein_coding|CODING|LOC_Os07g20164.1|1|1) FN1565-S.SNP.7:11644610 chr07:011644610 0 W/11644610-11644610 FN1565-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g20170 actin-depolymerizing factor, putative, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. W481-5-1.SNP.7:11646141 chr07:011646141 0 W/11646141-11646141 W481-5-1 Single Base Substitution C-G INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-128.SNP.7:11650779 chr07:011650779 0 W/11650779-11650779 FN-128 Single Base Substitution T-C INTERGENIC HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN2646-S.SNP.7:11657218 chr07:011657218 0 W/11657218-11657218 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.98751;DP=5103;DP4=2574,2306,16,17;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00313541;MQB=4.11447e-09;MQSB=0.00805178;RPB=0.607666;SGB=146.368;VDB=0.913579;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.7:11658994 chr07:011658994 0 W/11658994-11658994 FN391-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os07g20200 retrotransposon protein, putative, unclassified, expressed SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2627-S.SNP.7:11659119 chr07:011659119 0 W/11659119-11659119 FN2627-S SNP T -> G AC=1;AN=200;BQB=0.868757;DP=4556;DP4=2087,1992,18,11;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00438982;MQB=0.000542569;MQSB=0.982431;RPB=0.999458;SGB=-40.0535;VDB=0.506552;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A551|1068|LOC_Os07g20200|protein_coding|CODING|LOC_Os07g20200.1|2|1) FN2550-S.SNP.7:11659942 chr07:011659942 0 W/11659942-11659942 FN2550-S SNP A -> G AC=1;AN=186;BQB=0.975564;DP=3629;DP4=1614,1628,4,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000551116;MQB=6.58514e-06;MQSB=0.569275;RPB=0.897834;SGB=8.58354;VDB=0.0169122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S826G|1068|LOC_Os07g20200|protein_coding|CODING|LOC_Os07g20200.1|2|1) FN921-S.SNP.7:11662844 chr07:011662844 0 W/11662844-11662844 FN921-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g20210 retrotransposon protein, putative, unclassified, expressed SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN921-S.SNP.7:11662845 chr07:011662845 0 W/11662845-11662845 FN921-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g20210 retrotransposon protein, putative, unclassified, expressed SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN916-S.SNP.7:11675297 chr07:011675297 0 W/11675297-11675297 FN916-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN896-S.SNP.7:11677682 chr07:011677682 0 W/11677682-11677682 FN896-S Single Base Substitution T-C INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2638-S.SNP.7:11681221 chr07:011681221 0 W/11681221-11681221 FN2638-S SNP T -> C AC=2;AN=200;BQB=0.582196;DP=4614;DP4=2229,2159,20,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=7.79973e-15;MQSB=6.02412e-06;RPB=0.447336;SGB=164.789;VDB=0.114578;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.7:11690179 chr07:011690179 0 W/11690179-11690179 FN3717-S SNP A -> G AC=1;AN=190;BQB=0.966744;DP=2903;DP4=1304,1486,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000124046;MQSB=0.952322;RPB=0.553781;SGB=14.7784;VDB=0.0895546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M1006T|1021|LOC_Os07g20280|protein_coding|CODING|LOC_Os07g20280.1|10|1) FN1042-S.SNP.7:11692327 chr07:011692327 0 W/11692327-11692327 FN1042-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g20280 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1709-S.SNP.7:11692435 chr07:011692435 0 W/11692435-11692435 FN1709-S SNP C -> T AC=2;AN=188;BQB=0.915201;DP=3284;DP4=1500,1721,26,22;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.9372e-16;MQSB=0.608516;RPB=0.251119;SGB=-50.1523;VDB=0.376301;EFF=INTRON(MODIFIER||||1021|LOC_Os07g20280|protein_coding|CODING|LOC_Os07g20280.1|7|1) FN3465-S.SNP.7:11694573 chr07:011694573 0 W/11694573-11694573 FN3465-S SNP T -> G AC=2;AN=184;BQB=0.976062;DP=3161;DP4=1456,1452,34,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.1169e-31;MQSB=0.866951;RPB=0.857145;SGB=153.737;VDB=0.552566;EFF=INTRON(MODIFIER||||1021|LOC_Os07g20280|protein_coding|CODING|LOC_Os07g20280.1|4|1) FN2354.SNP.7:11695767 chr07:011695767 0 W/11695767-11695767 FN2354 SNP C -> A AC=1;AN=192;BQB=0.936048;DP=5065;DP4=2438,2347,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000394867;MQB=1.4214e-06;MQSB=0.907516;RPB=0.327479;SGB=32.6514;VDB=0.0516518;EFF=INTRON(MODIFIER||||1021|LOC_Os07g20280|protein_coding|CODING|LOC_Os07g20280.1|2|1) FN660-S.SNP.7:11698735 chr07:011698735 0 W/11698735-11698735 FN660-S Single Base Substitution C-T INTERGENIC HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN2283.SNP.7:11702965 chr07:011702965 0 W/11702965-11702965 FN2283 SNP T -> C AC=1;AN=192;BQB=0.989491;DP=4372;DP4=1896,2209,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=5.47705e-15;MQSB=5.14394e-07;RPB=0.967985;SGB=62.2505;VDB=0.139661;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.7:11702965 chr07:011702965 0 W/11702965-11702965 FN804-S Single Base Substitution T-C INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2283.SNP.7:11702966 chr07:011702966 0 W/11702966-11702966 FN2283 SNP A -> C AC=1;AN=192;BQB=0.244218;DP=4373;DP4=1910,2154,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.000228676;MQB=4.35395e-15;MQSB=1.65373e-07;RPB=0.931854;SGB=30.82;VDB=0.228686;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.7:11702966 chr07:011702966 0 W/11702966-11702966 FN804-S Single Base Substitution A-C INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN577-S.SNP.7:11707017 chr07:011707017 0 W/11707017-11707017 FN577-S Single Base Substitution C-T INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1119-S.SNP.7:11707813 chr07:011707813 0 W/11707813-11707813 FN1119-S Single Base Substitution C-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-42.SNP.7:11710457 chr07:011710457 0 W/11710457-11710457 FN-42 Single Base Substitution A-G INTERGENIC Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN774-S.SNP.7:11711656 chr07:011711656 0 W/11711656-11711656 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3553-S.SNP.7:11726007 chr07:011726007 0 W/11726007-11726007 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.705752;DP=3428;DP4=1571,1739,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0560093;MQB=0.608105;MQSB=1.40214e-41;RPB=0.700741;SGB=23.5329;VDB=0.887954;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.7:11730358 chr07:011730358 0 W/11730358-11730358 FN4189-S SNP C -> T AC=1;AN=170;BQB=0.949063;DP=3652;DP4=1945,1636,9,2;HOB=6.92042e-05;ICB=0.000139222;MQ=30;MQ0F=0.148138;MQB=0.642303;MQSB=7.32592e-17;RPB=0.532936;SGB=43.4296;VDB=0.274778;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A882V|1470|LOC_Os07g20330|protein_coding|CODING|LOC_Os07g20330.1|1|1) FN2680-S.SNP.7:11730540 chr07:011730540 0 W/11730540-11730540 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.905421;DP=5305;DP4=2405,2274,15,11;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.126296;MQB=0.22372;MQSB=0;RPB=0.962623;SGB=52.9314;VDB=0.743871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A943T|1470|LOC_Os07g20330|protein_coding|CODING|LOC_Os07g20330.1|1|1) FN1401-S.SNP.7:11732228 chr07:011732228 0 W/11732228-11732228 FN1401-S Single Base Substitution T-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1018-S.SNP.7:11732325 chr07:011732325 0 W/11732325-11732325 FN1018-S Single Base Substitution A-T INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2752-S.SNP.7:11741318 chr07:011741318 0 W/11741318-11741318 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.240924;DP=4119;DP4=1978,1869,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05474e-05;MQSB=0.0543669;RPB=0.970205;SGB=40.4492;VDB=0.0469926;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.7:11741319 chr07:011741319 0 W/11741319-11741319 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.0814095;DP=4135;DP4=1987,1875,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.27094e-06;MQSB=0.0508171;RPB=0.919442;SGB=49.6594;VDB=0.095834;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.7:11746506 chr07:011746506 0 W/11746506-11746506 FN729-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g20360 retrotransposon protein, putative, unclassified, expressed SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2267-S.SNP.7:11750274 chr07:011750274 0 W/11750274-11750274 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.50218;DP=4675;DP4=2313,1981,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=8.24946e-07;MQSB=0.0253634;RPB=0.660503;SGB=-13.222;VDB=0.215399;EFF=INTRON(MODIFIER||||496|LOC_Os07g20360|protein_coding|CODING|LOC_Os07g20360.1|1|1) FN4146-S.SNP.7:11759395 chr07:011759395 0 W/11759395-11759395 FN4146-S SNP A -> T AC=2;AN=170;BQB=0.685233;DP=2747;DP4=1161,1441,19,19;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.00473244;MQB=3.49622e-14;MQSB=0.000807509;RPB=0.562124;SGB=163.381;VDB=0.954674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.7:11762115 chr07:011762115 0 W/11762115-11762115 FN2706-S SNP C -> A AC=1;AN=200;BQB=0.168047;DP=5201;DP4=2629,2264,8,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17286e-13;MQSB=0.982009;RPB=0.996209;SGB=60.747;VDB=0.0892717;EFF=INTRON(MODIFIER||||577|LOC_Os07g20370|protein_coding|CODING|LOC_Os07g20370.1|1|1) FN2645-S.SNP.7:11764736 chr07:011764736 0 W/11764736-11764736 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.998002;DP=4984;DP4=2388,2383,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.01852e-14;MQSB=0.986929;RPB=0.24375;SGB=141.763;VDB=0.0618743;EFF=INTRON(MODIFIER||||577|LOC_Os07g20370|protein_coding|CODING|LOC_Os07g20370.1|4|1) FN3852-S.SNP.7:11772592 chr07:011772592 0 W/11772592-11772592 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.915413;DP=2379;DP4=1044,1246,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000420345;MQB=3.65789e-05;MQSB=0.889253;RPB=0.925426;SGB=23.9652;VDB=0.224432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.7:11774289 chr07:011774289 0 W/11774289-11774289 FN1355-S Single Base Substitution G-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3983-S.SNP.7:11775753 chr07:011775753 0 W/11775753-11775753 FN3983-S SNP G -> A AC=2;AN=168;BQB=0.916064;DP=2731;DP4=1319,1324,12,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.40133e-14;MQSB=0.997809;RPB=0.943348;SGB=92.0501;VDB=0.381179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.7:11775755 chr07:011775755 0 W/11775755-11775755 FN3983-S SNP T -> A AC=2;AN=168;BQB=0.900586;DP=2722;DP4=1315,1317,11,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.69424e-14;MQSB=0.994833;RPB=0.98757;SGB=87.6193;VDB=0.484253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.7:11776520 chr07:011776520 0 W/11776520-11776520 FN2385 SNP G -> A AC=1;AN=192;BQB=0.96989;DP=9480;DP4=4497,4403,14,19;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0102321;MQB=0.476146;MQSB=0.00523922;RPB=1;SGB=-42.7339;VDB=0.370565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.7:11778558 chr07:011778558 0 W/11778558-11778558 FN1184-S Single Base Substitution A-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN893-S.SNP.7:11789226 chr07:011789226 0 W/11789226-11789226 FN893-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2251-S.SNP.7:11790276 chr07:011790276 0 W/11790276-11790276 FN2251-S SNP C -> T AC=1;AN=190;BQB=0.506974;DP=5235;DP4=2167,2591,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31088e-06;MQSB=0.857977;RPB=0.178089;SGB=25.439;VDB=0.324775;EFF=INTRON(MODIFIER||||673|LOC_Os07g20420|protein_coding|CODING|LOC_Os07g20420.1|1|1) FN3637-S.SNP.7:11799600 chr07:011799600 0 W/11799600-11799600 FN3637-S SNP T -> C AC=1;AN=190;BQB=0.526763;DP=2885;DP4=912,1864,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.76019e-06;MQSB=0.779249;RPB=0.272869;SGB=32.5467;VDB=0.827556;EFF=INTRON(MODIFIER||||1287|LOC_Os07g20430|protein_coding|CODING|LOC_Os07g20430.1|2|1) FN3353-S.SNP.7:11802579 chr07:011802579 0 W/11802579-11802579 FN3353-S SNP C -> A AC=1;AN=184;BQB=0.98079;DP=3655;DP4=1095,2415,12,21;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0478796;MQB=0.4773;MQSB=1.64101e-36;RPB=0.183298;SGB=31.1509;VDB=0.244317;EFF=INTRON(MODIFIER||||1287|LOC_Os07g20430|protein_coding|CODING|LOC_Os07g20430.1|1|1) FN3887-S.SNP.7:11803125 chr07:011803125 0 W/11803125-11803125 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.981471;DP=2369;DP4=1450,806,11,10;HOB=8.01154e-05;ICB=0.000161245;MQ=31;MQ0F=0.160827;MQB=0.996776;MQSB=0;RPB=0.994037;SGB=61.029;VDB=0.153135;EFF=UTR_5_PRIME(MODIFIER||3638||1287|LOC_Os07g20430|protein_coding|CODING|LOC_Os07g20430.1|1|1) W466-5-1.SNP.7:11805275 chr07:011805275 0 W/11805275-11805275 W466-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN4074-S.SNP.7:11805534 chr07:011805534 0 W/11805534-11805534 FN4074-S SNP C -> T AC=1;AN=182;BQB=0.956514;DP=3070;DP4=1601,1379,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.50321e-07;MQSB=0.896221;RPB=0.998085;SGB=44.1115;VDB=0.348282;EFF=INTRON(MODIFIER||||374|LOC_Os07g20440|protein_coding|CODING|LOC_Os07g20440.1|3|1) FN3296-S.SNP.7:11810261 chr07:011810261 0 W/11810261-11810261 FN3296-S SNP C -> A AC=1;AN=184;BQB=0.948582;DP=2381;DP4=1179,1130,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00419992;MQB=0.00291429;MQSB=2.2544e-07;RPB=0.460014;SGB=14.6182;VDB=0.136063;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E251*|317|LOC_Os07g20450|protein_coding|CODING|LOC_Os07g20450.1|2|1) FN2646-S.SNP.7:11811435 chr07:011811435 0 W/11811435-11811435 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.903762;DP=3917;DP4=1982,1638,14,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=5.93607e-08;MQSB=0.982234;RPB=0.764196;SGB=47.7211;VDB=0.0913991;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R60H|317|LOC_Os07g20450|protein_coding|CODING|LOC_Os07g20450.1|1|1) FN3368-S.SNP.7:11820001 chr07:011820001 0 W/11820001-11820001 FN3368-S SNP T -> G AC=1;AN=184;BQB=0.651561;DP=2313;DP4=1611,604,13,1;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.277994;MQB=0.0721206;MQSB=0;RPB=0.998523;SGB=57.786;VDB=0.303442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaC|K215N|1477|LOC_Os07g20460|protein_coding|CODING|LOC_Os07g20460.1|1|1) FN267-S.SNP.7:11828358 chr07:011828358 0 W/11828358-11828358 FN267-S Single Base Substitution T-A INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN1520-S.SNP.7:11829810 chr07:011829810 0 W/11829810-11829810 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3751-S.SNP.7:11831024 chr07:011831024 0 W/11831024-11831024 FN3751-S SNP C -> T AC=2;AN=190;BQB=0.885714;DP=2735;DP4=1232,1354,12,11;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0113346;MQB=2.11534e-06;MQSB=0.194898;RPB=0.852494;SGB=71.6393;VDB=0.830836;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K505|533|LOC_Os07g20490|protein_coding|CODING|LOC_Os07g20490.1|5|1) FN440-S.SNP.7:11832100 chr07:011832100 0 W/11832100-11832100 FN440-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g20490 retrotransposon protein, putative, unclassified, expressed SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN-101.SNP.7:11838503 chr07:011838503 0 W/11838503-11838503 FN-101 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g20500 retrotransposon protein, putative, unclassified, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1638-S.SNP.7:11838885 chr07:011838885 0 W/11838885-11838885 FN1638-S Single Base Substitution T-A INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1097-S.SNP.7:11852684 chr07:011852684 0 W/11852684-11852684 FN1097-S Single Base Substitution C-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3345-S.SNP.7:11853183 chr07:011853183 0 W/11853183-11853183 FN3345-S SNP G -> T AC=1;AN=184;BQB=0.99681;DP=3257;DP4=1491,1537,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=8.29799e-05;MQSB=0.980985;RPB=0.0153349;SGB=0.715177;VDB=0.167798;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.7:11860821 chr07:011860821 0 W/11860821-11860821 FN1545-S Single Base Substitution C-A INTRON Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN794-S.SNP.7:11878482 chr07:011878482 0 W/11878482-11878482 FN794-S Single Base Substitution G-A INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN4150-S.SNP.7:11884262 chr07:011884262 0 W/11884262-11884262 FN4150-S SNP C -> A AC=1;AN=170;BQB=0.700133;DP=2115;DP4=1203,832,14,12;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=7.92665e-14;MQSB=0.753195;RPB=0.726765;SGB=110.069;VDB=0.396472;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.7:11889117 chr07:011889117 0 W/11889117-11889117 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.996852;DP=2576;DP4=1236,1258,7,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.93129e-14;MQSB=0.995924;RPB=0.632469;SGB=102.753;VDB=0.0574967;EFF=INTRON(MODIFIER||||512|LOC_Os07g20580|protein_coding|CODING|LOC_Os07g20580.1|8|1) FN999-S.SNP.7:11892231 chr07:011892231 0 W/11892231-11892231 FN999-S Single Base Substitution T-C INTRON HOMO SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN999-S.SNP.7:11892232 chr07:011892232 0 W/11892232-11892232 FN999-S Single Base Substitution T-G INTRON HOMO SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2494.SNP.7:11893903 chr07:011893903 0 W/11893903-11893903 FN2494 SNP G -> T AC=1;AN=200;BQB=0.0899406;DP=4523;DP4=2415,1869,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.68331e-06;MQSB=0.448747;RPB=0.541818;SGB=54.2646;VDB=0.0278765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P124H|512|LOC_Os07g20580|protein_coding|CODING|LOC_Os07g20580.1|1|1) FN3440-S.SNP.7:11895233 chr07:011895233 0 W/11895233-11895233 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.928548;DP=2622;DP4=940,1593,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.30978e-05;MQSB=6.34636e-05;RPB=0.999951;SGB=46.3132;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.7:11897950 chr07:011897950 0 W/11897950-11897950 FN1140-S Single Base Substitution G-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. W502-3-4.SNP.7:11898116 chr07:011898116 0 W/11898116-11898116 W502-3-4 Single Base Substitution A-G INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1701-S.SNP.7:11898290 chr07:011898290 0 W/11898290-11898290 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.391574;DP=2984;DP4=1296,1648,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=4.91407e-05;MQSB=0.00590505;RPB=0.553199;SGB=2.45162;VDB=0.717994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1395-S.SNP.7:11900274 chr07:011900274 0 W/11900274-11900274 FN1395-S Single Base Substitution C-A INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN3656-S.SNP.7:11901729 chr07:011901729 0 W/11901729-11901729 FN3656-S SNP A -> G AC=1;AN=190;BQB=0.910306;DP=2915;DP4=1361,1442,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.25429e-08;MQSB=0.867526;RPB=0.686885;SGB=49.0954;VDB=0.993805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-171.SNP.7:11908520 chr07:011908520 0 W/11908520-11908520 FN-171 Single Base Substitution T-C INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1321-S.SNP.7:11916347 chr07:011916347 0 W/11916347-11916347 FN1321-S Single Base Substitution C-T INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2494.SNP.7:11920084 chr07:011920084 0 W/11920084-11920084 FN2494 SNP T -> G AC=1;AN=200;BQB=0.945826;DP=4493;DP4=2239,1981,9,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00333853;MQB=0.000522417;MQSB=0.106738;RPB=0.39261;SGB=40.2696;VDB=0.681875;EFF=INTRON(MODIFIER||||1093|LOC_Os07g20620|protein_coding|CODING|LOC_Os07g20620.1|4|1) FN1514-S.SNP.7:11926411 chr07:011926411 0 W/11926411-11926411 FN1514-S Single Base Substitution C-T INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3455-S.SNP.7:11927906 chr07:011927906 0 W/11927906-11927906 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.971712;DP=2898;DP4=1525,1313,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00310559;MQB=0.0022958;MQSB=0.151166;RPB=0.186707;SGB=30.6558;VDB=0.0719087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.7:11930655 chr07:011930655 0 W/11930655-11930655 FN1640-S Single Base Substitution T-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1707-S.SNP.7:11936205 chr07:011936205 0 W/11936205-11936205 FN1707-S SNP C -> T AC=2;AN=188;BQB=0.817065;DP=3434;DP4=1515,1859,18,13;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=5.73492e-10;MQSB=0.104126;RPB=0.922671;SGB=28.6876;VDB=0.0547174;EFF=INTRON(MODIFIER||||693|LOC_Os07g20660|protein_coding|CODING|LOC_Os07g20660.1|4|1) FN3437-S.SNP.7:11936205 chr07:011936205 0 W/11936205-11936205 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.944551;DP=2872;DP4=1371,1395,12,15;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=6.13057e-13;MQSB=0.943744;RPB=0.619757;SGB=85.0529;VDB=0.376181;EFF=INTRON(MODIFIER||||693|LOC_Os07g20660|protein_coding|CODING|LOC_Os07g20660.1|4|1) FN4137-S.SNP.7:11936205 chr07:011936205 0 W/11936205-11936205 FN4137-S SNP C -> T AC=1;AN=170;BQB=0.993811;DP=2430;DP4=1210,1144,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=8.8955e-05;MQSB=0.994208;RPB=0.717119;SGB=38.987;VDB=0.5;EFF=INTRON(MODIFIER||||693|LOC_Os07g20660|protein_coding|CODING|LOC_Os07g20660.1|4|1) FN1337-S.SNP.7:11936937 chr07:011936937 0 W/11936937-11936937 FN1337-S Single Base Substitution G-A INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2116-S.SNP.7:11936945 chr07:011936945 0 W/11936945-11936945 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.699192;DP=3630;DP4=1881,1695,11,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.94617e-11;MQSB=0.951188;RPB=0.958881;SGB=-42.92;VDB=0.0606516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.7:11942961 chr07:011942961 0 W/11942961-11942961 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.982402;DP=4823;DP4=2286,2120,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28582e-12;MQSB=0.469824;RPB=0.991406;SGB=-10.4526;VDB=0.238872;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S609|1878|LOC_Os07g20670|protein_coding|CODING|LOC_Os07g20670.1|6|1) FN2082-S.SNP.7:11946329 chr07:011946329 0 W/11946329-11946329 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.913632;DP=2549;DP4=878,1606,7,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.76721e-12;MQSB=0.965703;RPB=0.522042;SGB=48.9237;VDB=0.674539;EFF=INTRON(MODIFIER||||1878|LOC_Os07g20670|protein_coding|CODING|LOC_Os07g20670.1|2|1) FN-183.SNP.7:11953069 chr07:011953069 0 W/11953069-11953069 FN-183 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN3477-S.SNP.7:11954332 chr07:011954332 0 W/11954332-11954332 FN3477-S SNP C -> T AC=1;AN=184;BQB=0.998632;DP=3197;DP4=1641,1457,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000625586;MQB=2.31669e-08;MQSB=0.544828;RPB=0.642438;SGB=57.786;VDB=0.163592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.7:11955564 chr07:011955564 0 W/11955564-11955564 FN2606-S SNP T -> C AC=1;AN=198;BQB=0.665829;DP=4591;DP4=2421,1946,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0566325;MQB=0.0139771;MQSB=7.50608e-11;RPB=0.248732;SGB=40.3588;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.7:11955643 chr07:011955643 0 W/11955643-11955643 FN2305 SNP T -> A AC=1;AN=192;BQB=0.998682;DP=6218;DP4=3213,2517,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0361853;MQB=0.459362;MQSB=9.82144e-24;RPB=0.950063;SGB=54.0374;VDB=0.803842;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.7:11956924 chr07:011956924 0 W/11956924-11956924 FN988-S Single Base Substitution G-C INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-61.SNP.7:11957713 chr07:011957713 0 W/11957713-11957713 FN-61 Single Base Substitution C-T INTRON HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3976-S.SNP.7:11960730 chr07:011960730 0 W/11960730-11960730 FN3976-S SNP T -> A AC=1;AN=168;BQB=0.992434;DP=1904;DP4=628,1183,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=8.8833e-06;MQSB=0.944176;RPB=0.176962;SGB=47.7421;VDB=0.856747;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.7:11963868 chr07:011963868 0 W/11963868-11963868 FN801-S Single Base Substitution G-T INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1529-S.SNP.7:12097844 chr07:012097844 0 W/12097844-12097844 FN1529-S Single Base Substitution G-A INTRON HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1678-S.SNP.7:12102637 chr07:012102637 0 W/12102637-12102637 FN1678-S SNP C -> G AC=1;AN=188;BQB=0.99679;DP=3621;DP4=1672,1905,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.16458e-08;MQSB=0.757437;RPB=0.999702;SGB=26.0762;VDB=0.564771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.7:12107636 chr07:012107636 0 W/12107636-12107636 FN-44 Single Base Substitution G-A INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN2222-S.SNP.7:12107636 chr07:012107636 0 W/12107636-12107636 FN2222-S SNP G -> A AC=1;AN=190;BQB=0.258578;DP=4917;DP4=2314,2243,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.17957e-09;MQSB=0.0248708;RPB=0.929593;SGB=22.7576;VDB=0.542326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3809-S.SNP.7:12107636 chr07:012107636 0 W/12107636-12107636 FN3809-S SNP G -> A AC=2;AN=190;BQB=0.917475;DP=2587;DP4=1253,1232,9,10;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=2.93906e-10;MQSB=0.602609;RPB=0.412061;SGB=80.9724;VDB=0.0587664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.7:12108402 chr07:012108402 0 W/12108402-12108402 FN2781-S SNP C -> A AC=1;AN=186;BQB=0.099197;DP=3265;DP4=1442,1437,7,5;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=0.00013205;MQSB=0.223413;RPB=0.345031;SGB=-0.221308;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.7:12109618 chr07:012109618 0 W/12109618-12109618 FN3846-S SNP C -> T AC=1;AN=190;BQB=0.911643;DP=3342;DP4=1730,1516,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65403e-10;MQSB=0.938982;RPB=0.265867;SGB=76.4186;VDB=0.0279841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L69F|128|LOC_Os07g20930|protein_coding|CODING|LOC_Os07g20930.1|1|1) FN1197-S.SNP.7:12110676 chr07:012110676 0 W/12110676-12110676 FN1197-S Single Base Substitution A-G INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3787-S.SNP.7:12111831 chr07:012111831 0 W/12111831-12111831 FN3787-S SNP T -> G AC=2;AN=190;BQB=0.872254;DP=2363;DP4=1159,1101,12,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.40886e-09;MQSB=0.71125;RPB=0.272155;SGB=99.1879;VDB=0.456649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V94G|475|LOC_Os07g20940|protein_coding|CODING|LOC_Os07g20940.1|1|1) FN_N1-151-7.SNP.7:12236459 chr07:012236459 0 W/12236459-12236459 FN_N1-151-7 Single Base Substitution G-T HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN-174.SNP.7:12275594 chr07:012275594 0 W/12275594-12275594 FN-174 Single Base Substitution T-C INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. W416-6-1.SNP.7:12280376 chr07:012280376 0 W/12280376-12280376 W416-6-1 Single Base Substitution G-C INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN4163-S.SNP.7:12282490 chr07:012282490 0 W/12282490-12282490 FN4163-S SNP T -> C AC=1;AN=170;BQB=0.985212;DP=2518;DP4=1123,1280,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.46576e-06;MQSB=0.975175;RPB=0.483281;SGB=52.3148;VDB=0.505182;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.7:12282728 chr07:012282728 0 W/12282728-12282728 FN-188 Single Base Substitution G-A INTERGENIC HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3849-S.SNP.7:12284648 chr07:012284648 0 W/12284648-12284648 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.924453;DP=2074;DP4=946,1028,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.59712e-05;MQSB=0.995709;RPB=0.986047;SGB=47.0672;VDB=0.313095;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R292|307|LOC_Os07g21960|protein_coding|CODING|LOC_Os07g21960.1|2|1) FN2419.SNP.7:12285784 chr07:012285784 0 W/12285784-12285784 FN2419 SNP C -> T AC=1;AN=200;BQB=0.877529;DP=4477;DP4=2292,1904,18,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=4.64462e-10;MQSB=0.031563;RPB=0.942361;SGB=87.1368;VDB=0.223441;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.7:12287765 chr07:012287765 0 W/12287765-12287765 FN3651-S SNP C -> T AC=2;AN=190;BQB=0.983904;DP=2704;DP4=1094,1501,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.80048e-16;MQSB=0.996034;RPB=0.860224;SGB=85.8548;VDB=0.229326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.7:12289135 chr07:012289135 0 W/12289135-12289135 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.882361;DP=4210;DP4=1960,1995,12,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.12004e-07;MQSB=0.619659;RPB=0.911926;SGB=7.75428;VDB=0.438218;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.7:12298513 chr07:012298513 0 W/12298513-12298513 FN786-S Single Base Substitution G-A INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2673-S.SNP.7:12300123 chr07:012300123 0 W/12300123-12300123 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.178981;DP=4981;DP4=1994,2711,13,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0104397;MQB=6.6646e-07;MQSB=2.36854e-07;RPB=0.876556;SGB=86.5007;VDB=0.551368;EFF=INTRON(MODIFIER||||494|LOC_Os07g21990|protein_coding|CODING|LOC_Os07g21990.1|2|1) FN2782-S.SNP.7:12309407 chr07:012309407 0 W/12309407-12309407 FN2782-S SNP C -> T AC=1;AN=186;BQB=0.849526;DP=3474;DP4=1685,1586,8,5;HOB=5.78101e-05;ICB=0.000116242;MQ=41;MQ0F=0.000287853;MQB=0.000296948;MQSB=0.00238163;RPB=0.953877;SGB=54.144;VDB=0.30725;EFF=INTRON(MODIFIER||||1406|LOC_Os07g22000|protein_coding|CODING|LOC_Os07g22000.1|1|1) FN3968-S.SNP.7:12310432 chr07:012310432 0 W/12310432-12310432 FN3968-S SNP G -> A AC=2;AN=168;BQB=0.991983;DP=2612;DP4=1456,1052,17,20;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000382848;MQB=1.62973e-16;MQSB=0.0846091;RPB=0.864652;SGB=-90.0367;VDB=0.651743;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P161S|1406|LOC_Os07g22000|protein_coding|CODING|LOC_Os07g22000.1|1|1) FN2698-S.SNP.7:12315401 chr07:012315401 0 W/12315401-12315401 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.81222;DP=4949;DP4=2293,2376,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59027e-07;MQSB=0.957669;RPB=0.292725;SGB=24.2746;VDB=0.151081;EFF=INTRON(MODIFIER||||647|LOC_Os07g22024|protein_coding|CODING|LOC_Os07g22024.1|4|1) FN-356.SNP.7:12316714 chr07:012316714 0 W/12316714-12316714 FN-356 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g22024 zinc finger family protein, putative, expressed SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3431-S.SNP.7:12322155 chr07:012322155 0 W/12322155-12322155 FN3431-S SNP G -> A AC=1;AN=184;BQB=0.999436;DP=3296;DP4=1562,1642,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33577e-09;MQSB=0.997043;RPB=0.956216;SGB=39.2697;VDB=0.574694;EFF=INTRON(MODIFIER||||647|LOC_Os07g22024|protein_coding|CODING|LOC_Os07g22024.1|1|1) FN1512-S.SNP.7:12326589 chr07:012326589 0 W/12326589-12326589 FN1512-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os07g22050 retrotransposon, putative, centromere-specific SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2530-S.SNP.7:12331403 chr07:012331403 0 W/12331403-12331403 FN2530-S SNP G -> A AC=1;AN=196;BQB=0.954456;DP=3611;DP4=1675,1796,4,6;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0.000276932;MQB=3.00017e-06;MQSB=0.983424;RPB=0.0637972;SGB=40.3588;VDB=0.0500419;EFF=INTRON(MODIFIER||||1120|LOC_Os07g22060|protein_coding|CODING|LOC_Os07g22060.1|1|1) FN2334.SNP.7:12335337 chr07:012335337 0 W/12335337-12335337 FN2334 SNP C -> T AC=1;AN=192;BQB=0.729338;DP=4648;DP4=2142,2227,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=2.27586e-05;MQSB=0.0308186;RPB=0.991799;SGB=43.3444;VDB=0.990376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.7:12342091 chr07:012342091 0 W/12342091-12342091 FN2697-S SNP G -> A AC=1;AN=200;BQB=0.421386;DP=4431;DP4=1960,2212,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30522e-06;MQSB=0.912799;RPB=0.516735;SGB=21.6694;VDB=0.335261;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.7:12351327 chr07:012351327 0 W/12351327-12351327 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.843329;DP=4602;DP4=2342,1947,25,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51205e-15;MQSB=0.957767;RPB=0.930494;SGB=-4.35995;VDB=0.74972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.7:12351474 chr07:012351474 0 W/12351474-12351474 FN3906-S SNP A -> G AC=2;AN=158;BQB=0.819598;DP=1680;DP4=583,1045,2,10;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.00357143;MQB=0.000718394;MQSB=1.07683e-13;RPB=0.866359;SGB=14.3409;VDB=0.843405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K33E|366|LOC_Os07g22100|protein_coding|CODING|LOC_Os07g22100.1|1|1) FN503-S.SNP.7:12351639 chr07:012351639 0 W/12351639-12351639 FN503-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g22100 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN-197.SNP.7:12362843 chr07:012362843 0 W/12362843-12362843 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-291.SNP.7:12364861 chr07:012364861 0 W/12364861-12364861 FN-291 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g22120 expressed protein SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2771-S.SNP.7:12369042 chr07:012369042 0 W/12369042-12369042 FN2771-S SNP G -> A AC=2;AN=198;BQB=0.434966;DP=3884;DP4=1765,1905,23,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.11733e-26;MQSB=0.195483;RPB=0.577016;SGB=107.198;VDB=0.177056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.7:12371990 chr07:012371990 0 W/12371990-12371990 FN1416-S Single Base Substitution C-A INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-371.SNP.7:12372613 chr07:012372613 0 W/12372613-12372613 FN-371 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g22140 retrotransposon, putative, centromere-specific, expressed SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1731-S.SNP.7:12383563 chr07:012383563 0 W/12383563-12383563 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.988613;DP=3266;DP4=1618,1584,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000306185;MQB=2.80729e-06;MQSB=0.95655;RPB=0.902863;SGB=41.3359;VDB=0.301121;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.7:12383978 chr07:012383978 0 W/12383978-12383978 FN2083-S SNP A -> T AC=1;AN=168;BQB=0.311137;DP=3588;DP4=1854,1685,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00083612;MQB=6.15058e-10;MQSB=0.382931;RPB=0.997601;SGB=-10.2027;VDB=0.845492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y318N|431|LOC_Os07g22180|protein_coding|CODING|LOC_Os07g22180.1|2|1) FN2263-S.SNP.7:12400244 chr07:012400244 0 W/12400244-12400244 FN2263-S SNP G -> A AC=1;AN=190;BQB=0.70954;DP=5233;DP4=2582,2317,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.50721e-12;MQSB=0.0245892;RPB=0.998647;SGB=117.403;VDB=0.500427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.7:12400244 chr07:012400244 0 W/12400244-12400244 FN2390 SNP G -> A AC=2;AN=200;BQB=0.904865;DP=4645;DP4=2257,2135,22,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.68321e-19;MQSB=0.000139918;RPB=0.794471;SGB=141.214;VDB=0.34769;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.7:12400244 chr07:012400244 0 W/12400244-12400244 FN2637-S SNP G -> A AC=2;AN=200;BQB=0.972234;DP=4990;DP4=2457,2271,23,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.21641e-16;MQSB=0.00361256;RPB=0.283556;SGB=155.578;VDB=0.271683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.7:12400829 chr07:012400829 0 W/12400829-12400829 FN1643-S Single Base Substitution G-A INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN3699-S.SNP.7:12402955 chr07:012402955 0 W/12402955-12402955 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.997657;DP=2831;DP4=1477,1225,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000311979;MQSB=0.319008;RPB=0.91359;SGB=49.0954;VDB=0.500538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN1014-S Single Base Substitution C-T INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1561-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN1561-S Single Base Substitution C-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1624-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN1624-S Single Base Substitution C-T INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2126-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN2126-S SNP C -> T AC=2;AN=168;BQB=0.439266;DP=3400;DP4=1872,1463,26,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.35628e-24;MQSB=0.988362;RPB=0.574541;SGB=52.8385;VDB=0.6024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN2272-S SNP C -> T AC=2;AN=190;BQB=0.00710493;DP=4999;DP4=2358,2253,25,48;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.71608e-34;MQSB=0.929094;RPB=0.903019;SGB=249.333;VDB=0.425741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN3057-S SNP C -> T AC=2;AN=184;BQB=0.820407;DP=3119;DP4=1357,1643,12,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.75155e-15;MQSB=0.989955;RPB=0.965764;SGB=95.6183;VDB=0.134995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.986906;DP=2970;DP4=1338,1538,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.40098e-08;MQSB=0.989324;RPB=0.887918;SGB=48.7425;VDB=0.705512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.2097;DP=2796;DP4=1229,1488,20,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.60961e-15;MQSB=0.929888;RPB=0.755843;SGB=167.105;VDB=0.0265079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN3785-S SNP C -> T AC=2;AN=190;BQB=0.800398;DP=2940;DP4=1303,1520,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.53267e-14;MQSB=0.97475;RPB=0.988466;SGB=126.511;VDB=0.8024;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.7:12403177 chr07:012403177 0 W/12403177-12403177 FN846-S Single Base Substitution C-T INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN890-S.SNP.7:12403222 chr07:012403222 0 W/12403222-12403222 FN890-S Single Base Substitution T-C INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN829-S.SNP.7:12405525 chr07:012405525 0 W/12405525-12405525 FN829-S Single Base Substitution A-T INTERGENIC HOMO SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN_N1-26-1.SNP.7:12409386 chr07:012409386 0 W/12409386-12409386 FN_N1-26-1 Single Base Substitution C-T HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN3858-S.SNP.7:12409631 chr07:012409631 0 W/12409631-12409631 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.993789;DP=2622;DP4=1134,1406,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0198322;MQB=0.00152985;MQSB=0;RPB=0.959805;SGB=60.1755;VDB=0.172728;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.7:12421380 chr07:012421380 0 W/12421380-12421380 W470-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-162.SNP.7:12422921 chr07:012422921 0 W/12422921-12422921 FN-162 Single Base Substitution C-T INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1006-S.SNP.7:12430411 chr07:012430411 0 W/12430411-12430411 FN1006-S Single Base Substitution G-T INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1006-S.SNP.7:12430412 chr07:012430412 0 W/12430412-12430412 FN1006-S Single Base Substitution C-T INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3565-S.SNP.7:12431838 chr07:012431838 0 W/12431838-12431838 FN3565-S SNP A -> C AC=1;AN=188;BQB=0.426522;DP=2810;DP4=1206,1509,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.99255e-09;MQSB=0.856038;RPB=0.942437;SGB=8.62479;VDB=0.00636721;EFF=INTRON(MODIFIER||||555|LOC_Os07g22220|protein_coding|CODING|LOC_Os07g22220.1|9|1) FN-183.SNP.7:12454205 chr07:012454205 0 W/12454205-12454205 FN-183 Single Base Substitution T-C INTRON HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN886-S.SNP.7:12456921 chr07:012456921 0 W/12456921-12456921 FN886-S Single Base Substitution A-T INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN886-S.SNP.7:12456922 chr07:012456922 0 W/12456922-12456922 FN886-S Single Base Substitution A-T INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1310-S.SNP.7:12459896 chr07:012459896 0 W/12459896-12459896 FN1310-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN415-S.SNP.7:12460461 chr07:012460461 0 W/12460461-12460461 FN415-S Single Base Substitution T-C INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1551-S.SNP.7:12461055 chr07:012461055 0 W/12461055-12461055 FN1551-S Single Base Substitution G-A INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1264-S.SNP.7:12464078 chr07:012464078 0 W/12464078-12464078 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN-44.SNP.7:12466190 chr07:012466190 0 W/12466190-12466190 FN-44 Single Base Substitution T-G INTERGENIC HET SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN973-S.SNP.7:12470709 chr07:012470709 0 W/12470709-12470709 FN973-S Single Base Substitution T-C INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN1200-S.SNP.7:12472711 chr07:012472711 0 W/12472711-12472711 FN1200-S Single Base Substitution G-A INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2255-S.SNP.7:12473897 chr07:012473897 0 W/12473897-12473897 FN2255-S SNP C -> T AC=1;AN=190;BQB=0.985721;DP=5199;DP4=2603,2312,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9647e-08;MQSB=0.884593;RPB=0.779198;SGB=43.2083;VDB=0.674156;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.7:12473905 chr07:012473905 0 W/12473905-12473905 FN2255-S SNP A -> G AC=1;AN=190;BQB=0.970737;DP=5155;DP4=2506,2295,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.2108e-09;MQSB=0.913657;RPB=0.754497;SGB=26.2136;VDB=0.350103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.7:12474509 chr07:012474509 0 W/12474509-12474509 FN3628-S SNP G -> T AC=1;AN=190;BQB=0.597757;DP=3146;DP4=1517,1494,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0206612;MQB=0.274733;MQSB=0.0947828;RPB=0.53198;SGB=71.8647;VDB=0.808874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.7:12475818 chr07:012475818 0 W/12475818-12475818 FN2461 SNP T -> A AC=2;AN=200;BQB=0.202779;DP=4955;DP4=2274,2277,22,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00322906;MQB=5.96293e-13;MQSB=0.550215;RPB=0.986931;SGB=197.025;VDB=0.543816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3836-S.SNP.7:12476635 chr07:012476635 0 W/12476635-12476635 FN3836-S SNP T -> C AC=1;AN=190;BQB=0.976545;DP=2415;DP4=988,1347,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.010766;MQB=0.060343;MQSB=0.0665393;RPB=0.9793;SGB=39.9877;VDB=0.453493;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.7:12478934 chr07:012478934 0 W/12478934-12478934 FN3357-S SNP T -> A AC=1;AN=184;BQB=0.91956;DP=3360;DP4=1702,1554,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0047619;MQB=0.0014042;MQSB=0.826885;RPB=0.631655;SGB=42.7914;VDB=0.615537;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.7:12482280 chr07:012482280 0 W/12482280-12482280 FN666-S Single Base Substitution G-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN1709-S.SNP.7:12487321 chr07:012487321 0 W/12487321-12487321 FN1709-S SNP A -> G AC=1;AN=188;BQB=0.224094;DP=2631;DP4=1408,1187,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.0419963;MQSB=0.932095;RPB=0.434519;SGB=-36.4511;VDB=0.398319;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.7:12492885 chr07:012492885 0 W/12492885-12492885 W577-3-1 Single Base Substitution A-G INTERGENIC HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3924-S.SNP.7:12494036 chr07:012494036 0 W/12494036-12494036 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.990382;DP=2938;DP4=1427,1380,13,3;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0255276;MQB=0.309293;MQSB=0.00158475;RPB=0.674341;SGB=64.5449;VDB=0.00123916;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.7:12497096 chr07:012497096 0 W/12497096-12497096 FN1379-S Single Base Substitution T-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-381.SNP.7:12499663 chr07:012499663 0 W/12499663-12499663 FN-381 Single Base Substitution C-T INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN1102-S.SNP.7:12499663 chr07:012499663 0 W/12499663-12499663 FN1102-S Single Base Substitution C-T INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2306.SNP.7:12499663 chr07:012499663 0 W/12499663-12499663 FN2306 SNP C -> T AC=2;AN=192;BQB=0.0420324;DP=5365;DP4=2874,2099,10,20;HOB=0.0206163;ICB=0.494846;MQ=29;MQ0F=0.109226;MQB=0.00137651;MQSB=5.23956e-05;RPB=0.9969;SGB=-248.782;VDB=0.469714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.7:12499663 chr07:012499663 0 W/12499663-12499663 FN3949-S SNP C -> T AC=2;AN=168;BQB=0.977099;DP=2973;DP4=1372,1461,14,28;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.0756811;MQB=0.250811;MQSB=3.28364e-06;RPB=0.130252;SGB=-283.582;VDB=0.0414751;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.7:12510790 chr07:012510790 0 W/12510790-12510790 FN-203 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g22310 retrotransposon protein, putative, unclassified, expressed SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN908-S.SNP.7:12513270 chr07:012513270 0 W/12513270-12513270 FN908-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g22320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN662-S.SNP.7:12516722 chr07:012516722 0 W/12516722-12516722 FN662-S Single Base Substitution C-T INTERGENIC HET SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN2781-S.SNP.7:12516782 chr07:012516782 0 W/12516782-12516782 FN2781-S SNP G -> A AC=1;AN=186;BQB=0.310131;DP=3283;DP4=1360,1740,10,14;HOB=5.78101e-05;ICB=0.000116242;MQ=43;MQ0F=0;MQB=0.000350817;MQSB=0.000664597;RPB=0.868171;SGB=47.5102;VDB=0.448241;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.7:12517277 chr07:012517277 0 W/12517277-12517277 FN860-S Single Base Substitution G-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2572-S.SNP.7:12520786 chr07:012520786 0 W/12520786-12520786 FN2572-S SNP C -> A AC=1;AN=186;BQB=0.862298;DP=3948;DP4=1809,1936,14,17;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.4371e-16;MQSB=0.74242;RPB=0.910218;SGB=65.676;VDB=0.21912;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.7:12522673 chr07:012522673 0 W/12522673-12522673 FN_N1-202-3 Single Base Substitution T-A HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN1096-S.SNP.7:12526261 chr07:012526261 0 W/12526261-12526261 FN1096-S Single Base Substitution C-A INTERGENIC HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN977-S.SNP.7:12528460 chr07:012528460 0 W/12528460-12528460 FN977-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1666-S.SNP.7:12537579 chr07:012537579 0 W/12537579-12537579 FN1666-S SNP A -> G AC=1;AN=188;BQB=0.152796;DP=3697;DP4=1910,1748,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.63547e-08;MQSB=0.995378;RPB=0.200225;SGB=-166.713;VDB=0.736135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.7:12540678 chr07:012540678 0 W/12540678-12540678 FN3896-S SNP G -> A AC=1;AN=158;BQB=0.255159;DP=2706;DP4=1056,1544,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.8125e-05;MQSB=0.759709;RPB=0.704179;SGB=14.3409;VDB=0.0325455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.7:12541907 chr07:012541907 0 W/12541907-12541907 FN1028-S Single Base Substitution T-G INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1739-S.SNP.7:12542329 chr07:012542329 0 W/12542329-12542329 FN1739-S SNP T -> A AC=1;AN=188;BQB=0.504534;DP=4292;DP4=2305,1931,19,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.51346e-20;MQSB=0.992571;RPB=0.947656;SGB=-128.204;VDB=0.748796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.7:12543774 chr07:012543774 0 W/12543774-12543774 FN3656-S SNP G -> T AC=1;AN=190;BQB=0.213177;DP=3095;DP4=1447,1535,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000180712;MQSB=0.236007;RPB=0.978711;SGB=43.2083;VDB=0.51429;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.7:12544540 chr07:012544540 0 W/12544540-12544540 FN959-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1026-S.SNP.7:12546638 chr07:012546638 0 W/12546638-12546638 FN1026-S Single Base Substitution G-A INTRON HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN4001-S.SNP.7:12557150 chr07:012557150 0 W/12557150-12557150 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.999301;DP=2485;DP4=965,1403,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00965795;MQB=0.910459;MQSB=0.529813;RPB=0.254174;SGB=27.8864;VDB=0.423272;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.7:12557332 chr07:012557332 0 W/12557332-12557332 FN521-S Single Base Substitution G-A INTERGENIC HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3492-S.SNP.7:12558990 chr07:012558990 0 W/12558990-12558990 FN3492-S SNP C -> A AC=1;AN=184;BQB=0.992316;DP=2567;DP4=1221,1287,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.30945e-06;MQSB=0.407975;RPB=0.404643;SGB=25.1826;VDB=0.817121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q340K|831|LOC_Os07g22380|protein_coding|CODING|LOC_Os07g22380.1|2|1) FN433-S.SNP.7:12564859 chr07:012564859 0 W/12564859-12564859 FN433-S Single Base Substitution G-A INTERGENIC HOMO SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN2724-S.SNP.7:12567583 chr07:012567583 0 W/12567583-12567583 FN2724-S SNP T -> C AC=1;AN=200;BQB=0.0292522;DP=5329;DP4=2548,2607,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53087e-08;MQSB=0.898221;RPB=0.742075;SGB=29.4849;VDB=0.823797;EFF=INTRON(MODIFIER||||152|LOC_Os07g22390|protein_coding|CODING|LOC_Os07g22390.1|4|1),INTRON(MODIFIER||||152|LOC_Os07g22390|protein_coding|CODING|LOC_Os07g22390.2|4|1) FN1103-S.SNP.7:12575890 chr07:012575890 0 W/12575890-12575890 FN1103-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g22400 POLA3 - Putative DNA polymerase alpha complex subunit, expressed SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3452-S.SNP.7:12601303 chr07:012601303 0 W/12601303-12601303 FN3452-S SNP C -> T AC=2;AN=184;BQB=0.882205;DP=3118;DP4=1322,1680,6,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.20476e-06;MQSB=0.999634;RPB=0.0589647;SGB=53.2642;VDB=0.0766623;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T675|1394|LOC_Os07g22420|protein_coding|CODING|LOC_Os07g22420.1|4|1) FN700-S.SNP.7:12605912 chr07:012605912 0 W/12605912-12605912 FN700-S Single Base Substitution G-T INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN4150-S.SNP.7:12609031 chr07:012609031 0 W/12609031-12609031 FN4150-S SNP G -> C AC=1;AN=170;BQB=0.708029;DP=2173;DP4=1031,1063,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.016567;MQB=0.000146342;MQSB=0.012294;RPB=0.9927;SGB=70.0854;VDB=0.4509;EFF=INTRON(MODIFIER||||1700|LOC_Os07g22430|protein_coding|CODING|LOC_Os07g22430.1|3|1) FN1011-S.SNP.7:12609176 chr07:012609176 0 W/12609176-12609176 FN1011-S Single Base Substitution A-T INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1475-S.SNP.7:12614806 chr07:012614806 0 W/12614806-12614806 FN1475-S Single Base Substitution G-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN_N1-150-1.SNP.7:12617836 chr07:012617836 0 W/12617836-12617836 FN_N1-150-1 Single Base Substitution G-C HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2656-S.SNP.7:12618896 chr07:012618896 0 W/12618896-12618896 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.433356;DP=4639;DP4=2164,2211,16,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40341e-21;MQSB=0.929364;RPB=0.999523;SGB=150.973;VDB=0.512856;EFF=INTERGENIC(MODIFIER||||||||||1) FN1730-S.SNP.7:12629751 chr07:012629751 0 W/12629751-12629751 FN1730-S SNP T -> C AC=1;AN=188;BQB=0.000167494;DP=3064;DP4=2061,964,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0130305;MQSB=0.656313;RPB=0.83617;SGB=-54.619;VDB=0.00508535;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.7:12632332 chr07:012632332 0 W/12632332-12632332 FN-286 Single Base Substitution G-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3431-S.SNP.7:12632332 chr07:012632332 0 W/12632332-12632332 FN3431-S SNP G -> A AC=1;AN=184;BQB=0.926364;DP=2831;DP4=1433,1315,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=0.00210878;MQSB=8.4826e-05;RPB=0.720369;SGB=35.1773;VDB=0.527088;EFF=INTERGENIC(MODIFIER||||||||||1) FN998-S.SNP.7:12633164 chr07:012633164 0 W/12633164-12633164 FN998-S Single Base Substitution T-A INTRON HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3661-S.SNP.7:12639716 chr07:012639716 0 W/12639716-12639716 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.996675;DP=3001;DP4=1321,1482,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74924e-08;MQSB=0.999988;RPB=0.840451;SGB=62.7569;VDB=0.750458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.7:12647151 chr07:012647151 0 W/12647151-12647151 FN3665-S SNP G -> T AC=2;AN=190;BQB=0.776453;DP=3017;DP4=1295,1553,27,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.63258e-33;MQSB=0.98393;RPB=0.446144;SGB=284.905;VDB=0.797721;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.7:12649102 chr07:012649102 0 W/12649102-12649102 FN-249 Single Base Substitution G-T INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN804-S.SNP.7:12649161 chr07:012649161 0 W/12649161-12649161 FN804-S Single Base Substitution A-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3993-S.SNP.7:12655227 chr07:012655227 0 W/12655227-12655227 FN3993-S SNP T -> A AC=1;AN=168;BQB=0.999169;DP=2454;DP4=1216,1063,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.24588e-11;MQSB=0.896611;RPB=0.685922;SGB=9.91396;VDB=0.387944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K105N|127|LOC_Os07g22494|protein_coding|CODING|LOC_Os07g22494.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K105N|127|LOC_Os07g22494|protein_coding|CODING|LOC_Os07g22494.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K105N|126|LOC_Os07g22494|protein_coding|CODING|LOC_Os07g22494.3|3|1),UTR_3_PRIME(MODIFIER||506||93|LOC_Os07g22494|protein_coding|CODING|LOC_Os07g22494.4|4|1) FN3549-S.SNP.7:12658499 chr07:012658499 0 W/12658499-12658499 FN3549-S SNP C -> T AC=1;AN=188;BQB=0.984156;DP=2381;DP4=1431,886,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19881e-07;MQSB=0.995053;RPB=0.964964;SGB=44.4357;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.7:12658502 chr07:012658502 0 W/12658502-12658502 FN3549-S SNP G -> T AC=1;AN=188;BQB=0.76774;DP=2376;DP4=1422,905,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26587e-07;MQSB=0.998596;RPB=0.99917;SGB=44.4357;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.7:12668145 chr07:012668145 0 W/12668145-12668145 FN2295 SNP T -> C AC=2;AN=192;BQB=0.869362;DP=4954;DP4=2437,2160,25,24;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=1.318e-19;MQSB=0.0646016;RPB=0.700429;SGB=164.532;VDB=0.499881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E304G|360|LOC_Os07g22520|protein_coding|CODING|LOC_Os07g22520.1|3|1) FN2295.SNP.7:12668146 chr07:012668146 0 W/12668146-12668146 FN2295 SNP C -> G AC=2;AN=192;BQB=0.821724;DP=4955;DP4=2420,2214,27,25;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=2.3287e-16;MQSB=0.181969;RPB=0.244905;SGB=-51.0113;VDB=0.488544;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E304Q|360|LOC_Os07g22520|protein_coding|CODING|LOC_Os07g22520.1|3|1) FN2107-S.SNP.7:12674934 chr07:012674934 0 W/12674934-12674934 FN2107-S SNP T -> A AC=2;AN=168;BQB=0.922163;DP=2924;DP4=1356,1530,9,10;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0;MQB=4.59073e-11;MQSB=2.09667e-05;RPB=0.849673;SGB=55.3328;VDB=0.0269147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.7:12676864 chr07:012676864 0 W/12676864-12676864 FN3615-S SNP A -> T AC=1;AN=190;BQB=0.649316;DP=2844;DP4=1440,1194,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000374855;MQSB=0.999942;RPB=0.821713;SGB=13.4442;VDB=0.944581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F408I|422|LOC_Os07g22534|protein_coding|CODING|LOC_Os07g22534.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F409I|423|LOC_Os07g22534|protein_coding|CODING|LOC_Os07g22534.1|8|1),UTR_3_PRIME(MODIFIER||200||373|LOC_Os07g22534|protein_coding|CODING|LOC_Os07g22534.3|7|1) FN4167-S.SNP.7:12684932 chr07:012684932 0 W/12684932-12684932 FN4167-S SNP C -> T AC=2;AN=170;BQB=0.999438;DP=2547;DP4=1166,1267,11,6;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.21338e-08;MQSB=0.0222494;RPB=0.93776;SGB=48.6486;VDB=0.604818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.7:12685468 chr07:012685468 0 W/12685468-12685468 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN-235.SNP.7:12687366 chr07:012687366 0 W/12687366-12687366 FN-235 Single Base Substitution G-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2243-S.SNP.7:12688020 chr07:012688020 0 W/12688020-12688020 FN2243-S SNP C -> G AC=1;AN=190;BQB=0.999767;DP=4906;DP4=2497,2136,18,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=8.49366e-12;MQSB=0.715437;RPB=0.553711;SGB=117.403;VDB=0.348605;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Gta|L132V|1562|LOC_Os07g22550|protein_coding|CODING|LOC_Os07g22550.1|1|1) FN3669-S.SNP.7:12692102 chr07:012692102 0 W/12692102-12692102 FN3669-S SNP A -> G AC=2;AN=190;BQB=0.609019;DP=2792;DP4=1369,1304,7,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.000127502;MQSB=0.750268;RPB=0.764638;SGB=32.5467;VDB=0.798635;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R1102|1562|LOC_Os07g22550|protein_coding|CODING|LOC_Os07g22550.1|9|1) FN1346-S.SNP.7:12692413 chr07:012692413 0 W/12692413-12692413 FN1346-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g22550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3934-S.SNP.7:12692966 chr07:012692966 0 W/12692966-12692966 FN3934-S SNP G -> T AC=1;AN=158;BQB=0.993224;DP=2441;DP4=1247,1095,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.26701e-10;MQSB=0.880797;RPB=0.973958;SGB=64.5449;VDB=0.466606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L1380F|1562|LOC_Os07g22550|protein_coding|CODING|LOC_Os07g22550.1|10|1) FN-198.SNP.7:12704136 chr07:012704136 0 W/12704136-12704136 FN-198 Single Base Substitution C-T INTERGENIC HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN3879-S.SNP.7:12712283 chr07:012712283 0 W/12712283-12712283 FN3879-S SNP C -> A AC=2;AN=158;BQB=0.494;DP=2505;DP4=1133,1238,24,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.29884e-22;MQSB=0.787969;RPB=0.967105;SGB=132.285;VDB=0.968868;EFF=INTRON(MODIFIER||||441|LOC_Os07g22590|protein_coding|CODING|LOC_Os07g22590.1|4|1) FN2609-S.SNP.7:12713586 chr07:012713586 0 W/12713586-12713586 FN2609-S SNP A -> G AC=1;AN=198;BQB=0.616345;DP=3995;DP4=2102,1644,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.64135e-10;MQSB=0.422001;RPB=0.093757;SGB=17.325;VDB=0.0539527;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.7:12716282 chr07:012716282 0 W/12716282-12716282 FN1300-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2583-S.SNP.7:12727227 chr07:012727227 0 W/12727227-12727227 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.657144;DP=4928;DP4=1919,2746,12,14;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.247971;MQB=0.597859;MQSB=0;RPB=0.949122;SGB=83.5316;VDB=0.747092;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R781C|1406|LOC_Os07g22610|protein_coding|CODING|LOC_Os07g22610.1|5|1) FN3411-S.SNP.7:12733007 chr07:012733007 0 W/12733007-12733007 FN3411-S SNP G -> A AC=2;AN=184;BQB=0.934784;DP=2912;DP4=1201,1630,8,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.88316e-12;MQSB=0.980847;RPB=0.624851;SGB=70.9657;VDB=0.345461;EFF=INTRON(MODIFIER||||634|LOC_Os07g22620|protein_coding|CODING|LOC_Os07g22620.1|4|1) FN4165-S.SNP.7:12733520 chr07:012733520 0 W/12733520-12733520 FN4165-S SNP C -> A AC=2;AN=170;BQB=0.760094;DP=2378;DP4=1183,1125,8,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.46357e-09;MQSB=0.243769;RPB=0.960251;SGB=83.4133;VDB=0.80475;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E261*|634|LOC_Os07g22620|protein_coding|CODING|LOC_Os07g22620.1|4|1);LOF=(LOC_Os07g22620|LOC_Os07g22620|1|1.00);NMD=(LOC_Os07g22620|LOC_Os07g22620|1|1.00) FN3345-S.SNP.7:12735980 chr07:012735980 0 W/12735980-12735980 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.995035;DP=3549;DP4=1644,1787,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34337e-06;MQSB=0.999632;RPB=0.518314;SGB=25.1826;VDB=0.517259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A71T|634|LOC_Os07g22620|protein_coding|CODING|LOC_Os07g22620.1|2|1) FN917-S.SNP.7:12739422 chr07:012739422 0 W/12739422-12739422 FN917-S Single Base Substitution C-T INTERGENIC HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN439-S.SNP.7:12745081 chr07:012745081 0 W/12745081-12745081 FN439-S Single Base Substitution A-G INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN2485.SNP.7:12747002 chr07:012747002 0 W/12747002-12747002 FN2485 SNP T -> C AC=1;AN=200;BQB=0.303028;DP=4730;DP4=2241,2296,7,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=1.28767e-10;MQSB=0.998211;RPB=0.945958;SGB=91.1059;VDB=0.264162;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.7:12760280 chr07:012760280 0 W/12760280-12760280 FN437-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN2321.SNP.7:12768459 chr07:012768459 0 W/12768459-12768459 FN2321 SNP A -> T AC=1;AN=192;BQB=0.114598;DP=4740;DP4=2178,2311,11,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.1977e-14;MQSB=0.998606;RPB=0.990991;SGB=-7.9965;VDB=0.0944221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.7:12768460 chr07:012768460 0 W/12768460-12768460 FN2321 SNP A -> T AC=1;AN=192;BQB=0.979263;DP=4734;DP4=2135,2303,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.31993e-15;MQSB=0.999077;RPB=0.824551;SGB=75.4235;VDB=0.24773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.7:12777908 chr07:012777908 0 W/12777908-12777908 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.617537;DP=5027;DP4=2413,2355,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08533e-05;MQSB=0.959778;RPB=0.980199;SGB=25.849;VDB=0.580586;EFF=UTR_3_PRIME(MODIFIER||181||190|LOC_Os07g22680|protein_coding|CODING|LOC_Os07g22680.1|1|1) FN2199-S.SNP.7:12779323 chr07:012779323 0 W/12779323-12779323 FN2199-S SNP T -> C AC=1;AN=190;BQB=0.787379;DP=5175;DP4=2220,2664,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193237;MQB=2.10209e-15;MQSB=0.818498;RPB=0.939076;SGB=85.8548;VDB=0.230455;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.7:12779400 chr07:012779400 0 W/12779400-12779400 FN4038-S SNP T -> A AC=2;AN=168;BQB=0.645989;DP=2781;DP4=1317,1325,19,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.25727e-18;MQSB=0.947932;RPB=0.554539;SGB=120.518;VDB=0.704397;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.7:12780794 chr07:012780794 0 W/12780794-12780794 FN1689-S SNP A -> G AC=2;AN=188;BQB=0.451634;DP=2346;DP4=901,1398,5,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.95985e-05;MQSB=0.977028;RPB=0.930874;SGB=26.0762;VDB=0.802159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.7:12789799 chr07:012789799 0 W/12789799-12789799 FN3463-S SNP C -> A AC=1;AN=184;BQB=0.94225;DP=2818;DP4=1484,1272,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.96978e-05;MQSB=0.897558;RPB=0.963442;SGB=10.6662;VDB=0.713137;EFF=INTRON(MODIFIER||||475|LOC_Os07g22700|protein_coding|CODING|LOC_Os07g22700.1|1|1),INTRON(MODIFIER||||475|LOC_Os07g22700|protein_coding|CODING|LOC_Os07g22700.2|1|1) FN2182-S.SNP.7:12790824 chr07:012790824 0 W/12790824-12790824 FN2182-S SNP C -> A AC=2;AN=190;BQB=0.827055;DP=4953;DP4=2555,2005,35,25;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.36216e-24;MQSB=0.532719;RPB=0.432705;SGB=9.48697;VDB=0.432782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.7:12791736 chr07:012791736 0 W/12791736-12791736 FN1630-S Single Base Substitution C-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN-299.SNP.7:12794095 chr07:012794095 0 W/12794095-12794095 FN-299 Single Base Substitution C-T INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN790-S.SNP.7:12794463 chr07:012794463 0 W/12794463-12794463 FN790-S Single Base Substitution A-T INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN3382-S.SNP.7:12803509 chr07:012803509 0 W/12803509-12803509 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.695989;DP=3848;DP4=1326,2330,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.99428e-11;MQSB=0.986978;RPB=0.98656;SGB=63.9222;VDB=0.154594;EFF=UTR_5_PRIME(MODIFIER||2310||351|LOC_Os07g22710|protein_coding|CODING|LOC_Os07g22710.3|1|1),UTR_5_PRIME(MODIFIER||2310||238|LOC_Os07g22710|protein_coding|CODING|LOC_Os07g22710.4|1|1),UTR_5_PRIME(MODIFIER||113||512|LOC_Os07g22710|protein_coding|CODING|LOC_Os07g22710.1|1|1),UTR_5_PRIME(MODIFIER||113||424|LOC_Os07g22710|protein_coding|CODING|LOC_Os07g22710.2|1|1) FN-87.SNP.7:12817505 chr07:012817505 0 W/12817505-12817505 FN-87 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g22720 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3758-S.SNP.7:12817642 chr07:012817642 0 W/12817642-12817642 FN3758-S SNP G -> A AC=2;AN=190;BQB=0.991688;DP=2576;DP4=1311,1142,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86048e-14;MQSB=0.917254;RPB=0.657325;SGB=103.742;VDB=0.48618;EFF=INTRON(MODIFIER||||547|LOC_Os07g22720|protein_coding|CODING|LOC_Os07g22720.1|3|1),INTRON(MODIFIER||||541|LOC_Os07g22720|protein_coding|CODING|LOC_Os07g22720.2|3|1) FN3877-S.SNP.7:12830061 chr07:012830061 0 W/12830061-12830061 FN3877-S SNP C -> A AC=1;AN=158;BQB=0.880173;DP=2079;DP4=1078,932,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.98385e-08;MQSB=0.987101;RPB=0.866515;SGB=19.0798;VDB=0.402361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.7:12831509 chr07:012831509 0 W/12831509-12831509 FN2220-S SNP G -> A AC=1;AN=190;BQB=0.811752;DP=4939;DP4=2661,1904,21,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.1989e-19;MQSB=0.974103;RPB=0.898565;SGB=74.7373;VDB=0.598251;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.7:12834746 chr07:012834746 0 W/12834746-12834746 FN-81 Single Base Substitution C-A INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN2534-S.SNP.7:12835817 chr07:012835817 0 W/12835817-12835817 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.940265;DP=4138;DP4=1958,1979,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.09157e-05;MQSB=0.993801;RPB=0.30242;SGB=44.9538;VDB=0.649418;EFF=INTRON(MODIFIER||||499|LOC_Os07g22740|protein_coding|CODING|LOC_Os07g22740.1|1|1) FN1309-S.SNP.7:12855067 chr07:012855067 0 W/12855067-12855067 FN1309-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1517-S.SNP.7:12856830 chr07:012856830 0 W/12856830-12856830 FN1517-S Single Base Substitution T-A INTERGENIC Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN4142-S.SNP.7:12864548 chr07:012864548 0 W/12864548-12864548 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.627275;DP=2305;DP4=1117,1129,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.17283e-05;MQSB=0.228971;RPB=0.231973;SGB=10.1134;VDB=0.737658;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V43M|439|LOC_Os07g22800|protein_coding|CODING|LOC_Os07g22800.1|1|1) FN2559-S.SNP.7:12870893 chr07:012870893 0 W/12870893-12870893 FN2559-S SNP A -> T AC=1;AN=198;BQB=0.662106;DP=4002;DP4=2004,1776,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00208833;MQSB=0.401672;RPB=0.659296;SGB=26.5745;VDB=0.513814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.7:12873435 chr07:012873435 0 W/12873435-12873435 FN2107-S SNP G -> A AC=2;AN=168;BQB=0.400598;DP=3476;DP4=1834,1587,19,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.13041e-13;MQSB=0.663946;RPB=0.454392;SGB=-169.317;VDB=0.00920619;EFF=INTRON(MODIFIER||||190|LOC_Os07g22820|protein_coding|CODING|LOC_Os07g22820.1|3|1) FN2653-S.SNP.7:12878602 chr07:012878602 0 W/12878602-12878602 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.71617;DP=4971;DP4=2438,2218,11,11;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.047073;MQB=0.606752;MQSB=0;RPB=0.884439;SGB=15.9106;VDB=0.849484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.7:12885531 chr07:012885531 0 W/12885531-12885531 FN2614-S SNP C -> T AC=2;AN=198;BQB=0.386415;DP=3778;DP4=1781,1695,19,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.43619e-21;MQSB=0.898261;RPB=0.895275;SGB=99.4126;VDB=0.498024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G169S|429|LOC_Os07g22850|protein_coding|CODING|LOC_Os07g22850.1|2|1) FN3480-S.SNP.7:12887049 chr07:012887049 0 W/12887049-12887049 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.95906;DP=2298;DP4=926,1306,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00391645;MQB=0.813294;MQSB=1.12127e-05;RPB=0.727857;SGB=30.6558;VDB=0.702288;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.7:12890521 chr07:012890521 0 W/12890521-12890521 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.588581;DP=3531;DP4=1821,1615,18,13;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.0589068;MQB=0.499318;MQSB=0.996547;RPB=0.426114;SGB=99.14;VDB=0.465582;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V120|954|LOC_Os07g22860|protein_coding|CODING|LOC_Os07g22860.1|2|1) FN-71.SNP.7:12891480 chr07:012891480 0 W/12891480-12891480 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1482-S.SNP.7:12901075 chr07:012901075 0 W/12901075-12901075 FN1482-S Single Base Substitution C-T INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN671-S.SNP.7:12911641 chr07:012911641 0 W/12911641-12911641 FN671-S Single Base Substitution C-G INTRON HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN671-S.SNP.7:12911645 chr07:012911645 0 W/12911645-12911645 FN671-S Single Base Substitution A-G INTRON HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN926-S.SNP.7:12914489 chr07:012914489 0 W/12914489-12914489 FN926-S Single Base Substitution G-A INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-56.SNP.7:12918380 chr07:012918380 0 W/12918380-12918380 FN-56 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN434-S.SNP.7:12932562 chr07:012932562 0 W/12932562-12932562 FN434-S Single Base Substitution C-T INTRON HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN2670-S.SNP.7:12935761 chr07:012935761 0 W/12935761-12935761 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.984484;DP=4696;DP4=2469,1944,21,23;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000425894;MQB=3.36512e-16;MQSB=9.53209e-06;RPB=0.415985;SGB=99.8245;VDB=0.750841;EFF=INTRON(MODIFIER||||2268|LOC_Os07g22960|protein_coding|CODING|LOC_Os07g22960.1|15|1) FN472-S.SNP.7:12939021 chr07:012939021 0 W/12939021-12939021 FN472-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g22960 retrotransposon protein, putative, unclassified, expressed SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3354-S.SNP.7:12945309 chr07:012945309 0 W/12945309-12945309 FN3354-S SNP A -> G AC=1;AN=184;BQB=0.961377;DP=3107;DP4=1552,1469,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29709e-08;MQSB=0.999072;RPB=0.304978;SGB=62.3078;VDB=0.0107898;EFF=INTRON(MODIFIER||||2268|LOC_Os07g22960|protein_coding|CODING|LOC_Os07g22960.1|6|1) FN1008-S.SNP.7:12946911 chr07:012946911 0 W/12946911-12946911 FN1008-S Single Base Substitution T-G INTRON HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2239-S.SNP.7:12950649 chr07:012950649 0 W/12950649-12950649 FN2239-S SNP T -> A AC=1;AN=190;BQB=0.917364;DP=4822;DP4=2432,1988,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207383;MQB=9.83611e-12;MQSB=0.900388;RPB=0.857792;SGB=49.1985;VDB=0.127905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.7:12950651 chr07:012950651 0 W/12950651-12950651 FN3875-S SNP C -> T AC=1;AN=158;BQB=0.966828;DP=2407;DP4=1309,997,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.38487e-10;MQSB=0.945582;RPB=0.996632;SGB=60.1755;VDB=0.877136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.7:12950652 chr07:012950652 0 W/12950652-12950652 FN3875-S SNP A -> T AC=1;AN=158;BQB=0.97067;DP=2412;DP4=1323,1006,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.62312e-11;MQSB=0.985701;RPB=0.984366;SGB=68.9144;VDB=0.821711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:12952213 chr07:012952213 0 W/12952213-12952213 FN2577-S SNP A -> T AC=1;AN=186;BQB=0.999431;DP=3926;DP4=1916,1720,7,9;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.09737e-09;MQSB=0.533247;RPB=0.665331;SGB=-14.4309;VDB=0.951107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:12952214 chr07:012952214 0 W/12952214-12952214 FN2577-S SNP C -> T AC=1;AN=186;BQB=0.576946;DP=3921;DP4=1912,1784,9,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.32523e-08;MQSB=0.5499;RPB=0.96359;SGB=40.149;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.7:12957884 chr07:012957884 0 W/12957884-12957884 FN2483 SNP G -> A AC=1;AN=200;BQB=0.944335;DP=4399;DP4=2250,1936,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3979e-09;MQSB=0.990095;RPB=0.959608;SGB=63.4749;VDB=0.448688;EFF=INTRON(MODIFIER||||671|LOC_Os07g22970|protein_coding|CODING|LOC_Os07g22970.1|6|1) FN2166-S.SNP.7:12960621 chr07:012960621 0 W/12960621-12960621 FN2166-S SNP C -> A AC=1;AN=168;BQB=0.00558701;DP=3737;DP4=1875,1813,13,17;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0048167;MQB=1.73989e-08;MQSB=1.12191e-12;RPB=0.821374;SGB=-147.902;VDB=0.327159;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.7:12962864 chr07:012962864 0 W/12962864-12962864 FN-189 Single Base Substitution C-T INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2149-S.SNP.7:12964581 chr07:012964581 0 W/12964581-12964581 FN2149-S SNP C -> A AC=1;AN=168;BQB=0.192734;DP=4408;DP4=2221,2150,21,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07762e-07;MQSB=0.784896;RPB=0.615035;SGB=-130.056;VDB=0.412642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.7:12965102 chr07:012965102 0 W/12965102-12965102 FN1402-S Single Base Substitution A-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. 702-7.SNP.7:12965712 chr07:012965712 0 W/12965712-12965712 702-7 Single Base Substitution T-G INTERGENIC Homo SNo: 1448, Mutant_ID: 702-7, Generation: M2, Mutations: 31, Genes: 27, Seed availability: Yes. FN-60.SNP.7:12975660 chr07:012975660 0 W/12975660-12975660 FN-60 Single Base Substitution G-C INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN2374.SNP.7:12978961 chr07:012978961 0 W/12978961-12978961 FN2374 SNP C -> T AC=1;AN=192;BQB=0.855476;DP=4726;DP4=2283,2184,12,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.62501e-09;MQSB=0.694414;RPB=0.983738;SGB=43.3444;VDB=0.38995;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.7:12984225 chr07:012984225 0 W/12984225-12984225 FN-70 Single Base Substitution C-T INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1686-S.SNP.7:12986790 chr07:012986790 0 W/12986790-12986790 FN1686-S SNP G -> C AC=1;AN=188;BQB=0.272127;DP=3900;DP4=2182,1665,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.97498e-10;MQSB=0.976969;RPB=0.976474;SGB=-10.6534;VDB=0.49323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.7:12990191 chr07:012990191 0 W/12990191-12990191 FN2375 SNP T -> A AC=2;AN=192;BQB=0.817947;DP=4825;DP4=2309,2147,20,18;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.000207254;MQB=6.83789e-11;MQSB=0.372412;RPB=0.325858;SGB=125.324;VDB=0.680929;EFF=UTR_3_PRIME(MODIFIER||1012||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.1|7|1),UTR_3_PRIME(MODIFIER||1012||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.2|6|1) FN4095-S.SNP.7:12990480 chr07:012990480 0 W/12990480-12990480 FN4095-S SNP G -> A AC=2;AN=182;BQB=0.584364;DP=3029;DP4=1370,1574,8,13;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.000660284;MQB=3.10809e-07;MQSB=0.0381495;RPB=0.607317;SGB=63.7146;VDB=0.799822;EFF=UTR_3_PRIME(MODIFIER||723||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.1|7|1),UTR_3_PRIME(MODIFIER||723||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.2|6|1) FN4165-S.SNP.7:12991131 chr07:012991131 0 W/12991131-12991131 FN4165-S SNP T -> A AC=2;AN=170;BQB=0.999563;DP=2406;DP4=1201,1132,9,14;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=1.89572e-07;MQSB=0.210955;RPB=0.78574;SGB=96.7413;VDB=0.337924;EFF=UTR_3_PRIME(MODIFIER||72||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.1|7|1),UTR_3_PRIME(MODIFIER||72||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.2|6|1) FN3502-S.SNP.7:12991614 chr07:012991614 0 W/12991614-12991614 FN3502-S SNP G -> A AC=1;AN=188;BQB=0.923956;DP=2863;DP4=1196,1590,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.3154e-05;MQSB=0.999757;RPB=0.643679;SGB=39.8925;VDB=0.251186;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T86|222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T86|222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.2|6|1),SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T85|221|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.3|7|1) FN2489.SNP.7:12995119 chr07:012995119 0 W/12995119-12995119 FN2489 SNP C -> T AC=2;AN=200;BQB=0.935243;DP=3945;DP4=1936,1622,16,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.09611e-12;MQSB=0.333533;RPB=0.995118;SGB=97.9523;VDB=0.673431;EFF=UTR_5_PRIME(MODIFIER||3032||222|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.1|1|1),UTR_5_PRIME(MODIFIER||3032||221|LOC_Os07g23030|protein_coding|CODING|LOC_Os07g23030.3|1|1) FN3825-S.SNP.7:12999684 chr07:012999684 0 W/12999684-12999684 FN3825-S SNP T -> C AC=1;AN=190;BQB=0.923675;DP=2773;DP4=1201,1463,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0342243;MQSB=0.951196;RPB=0.484678;SGB=26.3271;VDB=0.301201;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.7:13002205 chr07:013002205 0 W/13002205-13002205 FN4123-S SNP G -> A AC=1;AN=182;BQB=0.819332;DP=2994;DP4=1248,1676,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=0.00310191;MQSB=0.530219;RPB=0.823114;SGB=48.6223;VDB=0.745883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.7:13003727 chr07:013003727 0 W/13003727-13003727 FN-102 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g23040 retrotransposon protein, putative, unclassified, expressed SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN692-S.SNP.7:13005329 chr07:013005329 0 W/13005329-13005329 FN692-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN764-S.SNP.7:13013367 chr07:013013367 0 W/13013367-13013367 FN764-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g23070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN3681-S.SNP.7:13014997 chr07:013014997 0 W/13014997-13014997 FN3681-S SNP A -> T AC=1;AN=190;BQB=0.994755;DP=3171;DP4=1472,1535,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00126143;MQB=6.20585e-06;MQSB=0.70362;RPB=0.921607;SGB=35.4339;VDB=0.97104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T721S|1155|LOC_Os07g23070|protein_coding|CODING|LOC_Os07g23070.1|3|1) FN3681-S.SNP.7:13014998 chr07:013014998 0 W/13014998-13014998 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.777799;DP=3157;DP4=1487,1557,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00126703;MQB=2.35149e-05;MQSB=0.790919;RPB=0.672667;SGB=25.439;VDB=0.975524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T721I|1155|LOC_Os07g23070|protein_coding|CODING|LOC_Os07g23070.1|3|1) FN3753-S.SNP.7:13017486 chr07:013017486 0 W/13017486-13017486 FN3753-S SNP G -> A AC=1;AN=190;BQB=0.953108;DP=2905;DP4=1357,1404,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=6.14141e-05;MQSB=3.88751e-05;RPB=0.633883;SGB=26.3271;VDB=0.55395;EFF=INTRON(MODIFIER||||1155|LOC_Os07g23070|protein_coding|CODING|LOC_Os07g23070.1|6|1) FN3803-S.SNP.7:13018360 chr07:013018360 0 W/13018360-13018360 FN3803-S SNP C -> T AC=1;AN=190;BQB=0.938298;DP=3205;DP4=1469,1634,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.25702e-11;MQSB=0.960238;RPB=0.755607;SGB=57.4238;VDB=0.409481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.7:13021238 chr07:013021238 0 W/13021238-13021238 FN1745-S SNP T -> G AC=1;AN=188;BQB=0.835146;DP=2268;DP4=1148,1095,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000211001;MQSB=0.826774;RPB=0.994341;SGB=18.2682;VDB=0.251998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L209R|467|LOC_Os07g23090|protein_coding|CODING|LOC_Os07g23090.1|1|1) FN3909-S.SNP.7:13022192 chr07:013022192 0 W/13022192-13022192 FN3909-S SNP T -> C AC=1;AN=158;BQB=0.792698;DP=2838;DP4=1258,1427,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.68468e-10;MQSB=0.942514;RPB=0.801586;SGB=64.5449;VDB=0.0459823;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.7:13022897 chr07:013022897 0 W/13022897-13022897 FN4241-S SNP A -> G AC=1;AN=170;BQB=0.976108;DP=2690;DP4=1227,1372,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=2.42488e-06;MQSB=6.33285e-14;RPB=0.787383;SGB=43.4296;VDB=0.635956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.7:13023364 chr07:013023364 0 W/13023364-13023364 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.273462;DP=5291;DP4=2525,2370,19,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40023e-15;MQSB=0.975043;RPB=0.276554;SGB=-176.339;VDB=0.911442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.7:13025375 chr07:013025375 0 W/13025375-13025375 FN3693-S SNP A -> T AC=1;AN=190;BQB=0.997816;DP=3239;DP4=1762,1203,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34304e-11;MQSB=0.999342;RPB=0.259512;SGB=85.5263;VDB=0.697238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.7:13029351 chr07:013029351 0 W/13029351-13029351 FN1610-S Single Base Substitution A-G INTRON HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN448-S.SNP.7:13034255 chr07:013034255 0 W/13034255-13034255 FN448-S Single Base Substitution C-T INTRON HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-222.SNP.7:13036449 chr07:013036449 0 W/13036449-13036449 FN-222 Single Base Substitution T-A INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1420-S.SNP.7:13043056 chr07:013043056 0 W/13043056-13043056 FN1420-S Single Base Substitution C-A INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN-327.SNP.7:13044831 chr07:013044831 0 W/13044831-13044831 FN-327 Single Base Substitution G-A INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN337-S.SNP.7:13044831 chr07:013044831 0 W/13044831-13044831 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN1093-S.SNP.7:13051099 chr07:013051099 0 W/13051099-13051099 FN1093-S Single Base Substitution G-A INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN707-S.SNP.7:13054458 chr07:013054458 0 W/13054458-13054458 FN707-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g23150 transferase family protein, putative, expressed SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2435.SNP.7:13061881 chr07:013061881 0 W/13061881-13061881 FN2435 SNP C -> T AC=1;AN=200;BQB=0.61647;DP=4262;DP4=2096,1894,7,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00697638;MQSB=0.0946522;RPB=0.0107919;SGB=49.6594;VDB=0.390412;EFF=INTRON(MODIFIER||||314|LOC_Os07g23169|protein_coding|CODING|LOC_Os07g23169.1|6|1) FN1203-S.SNP.7:13064361 chr07:013064361 0 W/13064361-13064361 FN1203-S Single Base Substitution G-A INTRON HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1203-S.SNP.7:13064362 chr07:013064362 0 W/13064362-13064362 FN1203-S Single Base Substitution G-A INTRON HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1203-S.SNP.7:13064365 chr07:013064365 0 W/13064365-13064365 FN1203-S Single Base Substitution T-G INTRON HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN2561-S.SNP.7:13072290 chr07:013072290 0 W/13072290-13072290 FN2561-S SNP G -> T AC=1;AN=198;BQB=0.699095;DP=3866;DP4=1988,1679,5,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00490562;MQSB=0.00158311;RPB=0.861877;SGB=5.98864;VDB=0.85857;EFF=INTERGENIC(MODIFIER||||||||||1) FN-139.SNP.7:13084502 chr07:013084502 0 W/13084502-13084502 FN-139 Single Base Substitution C-T UTR_3_PRIME HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1392-S.SNP.7:13092163 chr07:013092163 0 W/13092163-13092163 FN1392-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN739-S.SNP.7:13111591 chr07:013111591 0 W/13111591-13111591 FN739-S Single Base Substitution A-G INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3519-S.SNP.7:13114635 chr07:013114635 0 W/13114635-13114635 FN3519-S SNP C -> T AC=1;AN=188;BQB=0.74542;DP=3322;DP4=1838,1409,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.85736e-08;MQSB=0.74973;RPB=0.623024;SGB=48.979;VDB=0.954067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.7:13116172 chr07:013116172 0 W/13116172-13116172 FN3823-S SNP C -> T AC=1;AN=190;BQB=0.510221;DP=2652;DP4=826,1735,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33016e-07;MQSB=0.709573;RPB=0.357041;SGB=80.9724;VDB=0.181863;EFF=INTRON(MODIFIER||||893|LOC_Os07g23270|protein_coding|CODING|LOC_Os07g23270.1|7|1) FN4272-S.SNP.7:13118716 chr07:013118716 0 W/13118716-13118716 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.96754;DP=2139;DP4=1042,1039,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.59819e-09;MQSB=0.998263;RPB=0.474712;SGB=61.2001;VDB=0.751216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D306N|893|LOC_Os07g23270|protein_coding|CODING|LOC_Os07g23270.1|2|1) FN2662-S.SNP.7:13119246 chr07:013119246 0 W/13119246-13119246 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.59705;DP=4481;DP4=2206,2008,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.40746e-11;MQSB=0.999983;RPB=0.846603;SGB=39.9056;VDB=0.966774;EFF=INTRON(MODIFIER||||893|LOC_Os07g23270|protein_coding|CODING|LOC_Os07g23270.1|1|1) FN1392-S.SNP.7:13123592 chr07:013123592 0 W/13123592-13123592 FN1392-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g23290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3330-S.SNP.7:13128710 chr07:013128710 0 W/13128710-13128710 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.919453;DP=3040;DP4=1163,1759,3,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.79699e-10;MQSB=0.9704;RPB=0.891305;SGB=62.3078;VDB=0.738171;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.7:13133062 chr07:013133062 0 W/13133062-13133062 FN947-S Single Base Substitution G-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3509-S.SNP.7:13136981 chr07:013136981 0 W/13136981-13136981 FN3509-S SNP C -> T AC=2;AN=188;BQB=0.84714;DP=4033;DP4=1914,2025,18,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00223159;MQB=3.00859e-17;MQSB=0.9639;RPB=0.978559;SGB=153.475;VDB=0.537403;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1296|1785|LOC_Os07g23300|protein_coding|CODING|LOC_Os07g23300.1|4|1) FN2350.SNP.7:13137874 chr07:013137874 0 W/13137874-13137874 FN2350 SNP A -> T AC=2;AN=192;BQB=0.271428;DP=4872;DP4=2278,1930,41,30;HOB=0.0206163;ICB=0.494846;MQ=44;MQ0F=0.00472085;MQB=0.000783597;MQSB=0.0594167;RPB=0.956049;SGB=31.9327;VDB=0.440684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E1594V|1785|LOC_Os07g23300|protein_coding|CODING|LOC_Os07g23300.1|4|1) FN185-2_3_4.SNP.7:13138855 chr07:013138855 0 W/13138855-13138855 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.977116;DP=1191;DP4=470,673,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.00618211;MQSB=0.381154;RPB=0.690117;SGB=14.7255;VDB=0.377633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.7:13140680 chr07:013140680 0 W/13140680-13140680 FN2177-S SNP C -> A AC=1;AN=168;BQB=0.971784;DP=1468;DP4=697,710,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0020436;MQB=0.0325319;MQSB=0.963844;RPB=0.715536;SGB=24.4556;VDB=0.251186;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A526S|1038|LOC_Os07g23310|protein_coding|CODING|LOC_Os07g23310.1|2|1) FN4271-S.SNP.7:13140862 chr07:013140862 0 W/13140862-13140862 FN4271-S SNP G -> T AC=1;AN=170;BQB=0.999948;DP=2156;DP4=969,1118,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.50618e-09;MQSB=0.852707;RPB=0.79237;SGB=48.6486;VDB=0.539555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A465D|1038|LOC_Os07g23310|protein_coding|CODING|LOC_Os07g23310.1|2|1) FN1421-S.SNP.7:13144518 chr07:013144518 0 W/13144518-13144518 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1754-S.SNP.7:13145644 chr07:013145644 0 W/13145644-13145644 FN1754-S SNP G -> C AC=1;AN=188;BQB=0.946431;DP=3412;DP4=1729,1645,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.4383e-08;MQSB=0.818468;RPB=0.209322;SGB=39.5276;VDB=0.533628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.7:13169005 chr07:013169005 0 W/13169005-13169005 FN2354 SNP G -> T AC=1;AN=192;BQB=0.11757;DP=5038;DP4=2340,2307,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.64642e-10;MQSB=0.865592;RPB=0.449111;SGB=15.1765;VDB=0.699758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.7:13172636 chr07:013172636 0 W/13172636-13172636 FN1153-S Single Base Substitution A-T INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN894-S.SNP.7:13175056 chr07:013175056 0 W/13175056-13175056 FN894-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g23370 retrotransposon protein, putative, unclassified, expressed SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN894-S.SNP.7:13175058 chr07:013175058 0 W/13175058-13175058 FN894-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g23370 retrotransposon protein, putative, unclassified, expressed SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1512-S.SNP.7:13176159 chr07:013176159 0 W/13176159-13176159 FN1512-S Single Base Substitution C-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2485.SNP.7:13180431 chr07:013180431 0 W/13180431-13180431 FN2485 SNP T -> C AC=1;AN=200;BQB=0.717298;DP=4729;DP4=2371,2113,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.774e-11;MQSB=0.917533;RPB=0.98771;SGB=61.9006;VDB=0.856348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.7:13188547 chr07:013188547 0 W/13188547-13188547 FN3916-S SNP G -> A AC=2;AN=156;BQB=0.964634;DP=2245;DP4=1130,1036,14,13;HOB=0.0253123;ICB=0.493673;MQ=49;MQ0F=0;MQB=1.68582e-16;MQSB=0.846333;RPB=0.839612;SGB=112.609;VDB=0.785441;EFF=INTRON(MODIFIER||||939|LOC_Os07g23400|protein_coding|CODING|LOC_Os07g23400.1|2|1) FN411-S.SNP.7:13192312 chr07:013192312 0 W/13192312-13192312 FN411-S Single Base Substitution T-C INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN411-S.SNP.7:13192345 chr07:013192345 0 W/13192345-13192345 FN411-S Single Base Substitution A-G INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3664-S.SNP.7:13196716 chr07:013196716 0 W/13196716-13196716 FN3664-S SNP C -> A AC=2;AN=190;BQB=0.986366;DP=2436;DP4=1200,1141,12,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.13737e-10;MQSB=0.901213;RPB=0.367365;SGB=76.4186;VDB=0.582925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.7:13198919 chr07:013198919 0 W/13198919-13198919 FN1690-S SNP G -> A AC=1;AN=188;BQB=1.74927e-09;DP=3232;DP4=1598,1572,18,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0116816;MQSB=0.99997;RPB=0.385643;SGB=-376.854;VDB=0.988274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.7:13202193 chr07:013202193 0 W/13202193-13202193 FN3840-S SNP C -> A AC=1;AN=190;BQB=0.98699;DP=3326;DP4=1624,1603,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11937e-10;MQSB=0.988585;RPB=0.992108;SGB=76.4186;VDB=0.96683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q100H|390|LOC_Os07g23410|protein_coding|CODING|LOC_Os07g23410.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q100H|390|LOC_Os07g23410|protein_coding|CODING|LOC_Os07g23410.1|1|1) W385-6-8-4.SNP.7:13203552 chr07:013203552 0 W/13203552-13203552 W385-6-8-4 Single Base Substitution C-T INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2435.SNP.7:13207746 chr07:013207746 0 W/13207746-13207746 FN2435 SNP C -> T AC=1;AN=200;BQB=0.966956;DP=4392;DP4=1840,2225,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27167e-08;MQSB=0.815527;RPB=0.275261;SGB=63.4749;VDB=0.650595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.7:13208005 chr07:013208005 0 W/13208005-13208005 FN1472-S Single Base Substitution A-T INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN-289.SNP.7:13208220 chr07:013208220 0 W/13208220-13208220 FN-289 Single Base Substitution T-A INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3369-S.SNP.7:13214038 chr07:013214038 0 W/13214038-13214038 FN3369-S SNP G -> C AC=1;AN=184;BQB=0.985878;DP=3381;DP4=1355,1944,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14961e-06;MQSB=0.891356;RPB=0.586353;SGB=48.7425;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.7:13214470 chr07:013214470 0 W/13214470-13214470 FN3701-S SNP A -> T AC=1;AN=190;BQB=0.212617;DP=2391;DP4=1289,972,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52994e-05;MQSB=0.973661;RPB=0.963322;SGB=43.2083;VDB=0.556976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.7:13217630 chr07:013217630 0 W/13217630-13217630 FN2794-S SNP A -> G AC=1;AN=198;BQB=0.957477;DP=4185;DP4=1985,2057,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.3193e-06;MQSB=0.911784;RPB=0.990103;SGB=49.5489;VDB=0.235908;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.7:13219120 chr07:013219120 0 W/13219120-13219120 FN1718-S SNP G -> T AC=1;AN=188;BQB=0.00375762;DP=3411;DP4=1318,2048,8,21;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00117268;MQB=4.43387e-05;MQSB=0.931487;RPB=0.580688;SGB=-108.551;VDB=0.341585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.7:13238085 chr07:013238085 0 W/13238085-13238085 FN3377-S SNP T -> A AC=1;AN=184;BQB=0.669568;DP=3272;DP4=1666,1501,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.57058e-06;MQSB=0.853501;RPB=0.583165;SGB=28.7043;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.7:13238086 chr07:013238086 0 W/13238086-13238086 FN3806-S SNP A -> T AC=1;AN=190;BQB=0.67222;DP=2871;DP4=1578,1177,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000348311;MQB=5.58995e-08;MQSB=0.881894;RPB=0.987726;SGB=5.66499;VDB=0.603622;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.7:13241783 chr07:013241783 0 W/13241783-13241783 FN282-S Single Base Substitution G-A INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2487.SNP.7:13250191 chr07:013250191 0 W/13250191-13250191 FN2487 SNP C -> G AC=1;AN=200;BQB=0.936712;DP=4396;DP4=2050,2047,9,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00545951;MQB=0.0089227;MQSB=0.999821;RPB=0.647329;SGB=86.5007;VDB=0.958726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A577P|963|LOC_Os07g23460|protein_coding|CODING|LOC_Os07g23460.1|4|1) FN404-S.SNP.7:13259781 chr07:013259781 0 W/13259781-13259781 FN404-S Single Base Substitution A-G INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN1527-S.SNP.7:13265470 chr07:013265470 0 W/13265470-13265470 FN1527-S Single Base Substitution G-C INTRON HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1563-S.SNP.7:13271855 chr07:013271855 0 W/13271855-13271855 FN1563-S Single Base Substitution C-T INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3948-S.SNP.7:13280263 chr07:013280263 0 W/13280263-13280263 FN3948-S SNP A -> T AC=2;AN=168;BQB=0.883378;DP=2616;DP4=1190,1276,21,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.10346e-23;MQSB=0.0606628;RPB=0.889689;SGB=193.077;VDB=0.887595;EFF=INTRON(MODIFIER||||897|LOC_Os07g23494|protein_coding|CODING|LOC_Os07g23494.1|5|1) FN1488-S.SNP.7:13285150 chr07:013285150 0 W/13285150-13285150 FN1488-S Single Base Substitution G-A INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2681-S.SNP.7:13285150 chr07:013285150 0 W/13285150-13285150 FN2681-S SNP G -> A AC=2;AN=200;BQB=0.953451;DP=4846;DP4=2036,2509,20,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.1066e-34;MQSB=0.44017;RPB=0.734486;SGB=191.687;VDB=0.299689;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.7:13285150 chr07:013285150 0 W/13285150-13285150 FN989-S Single Base Substitution G-A INTERGENIC HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3293-S.SNP.7:13288900 chr07:013288900 0 W/13288900-13288900 FN3293-S SNP T -> C AC=2;AN=184;BQB=0.886302;DP=2888;DP4=1392,1355,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.15065e-17;MQSB=0.999771;RPB=0.837696;SGB=95.6183;VDB=0.811239;EFF=UTR_3_PRIME(MODIFIER||279||294|LOC_Os07g23520|protein_coding|CODING|LOC_Os07g23520.1|7|1),INTRON(MODIFIER||||269|LOC_Os07g23520|protein_coding|CODING|LOC_Os07g23520.2|7|1) FN3854-S.SNP.7:13294207 chr07:013294207 0 W/13294207-13294207 FN3854-S SNP G -> C AC=1;AN=156;BQB=0.86891;DP=2783;DP4=1334,1344,8,5;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=2.66836e-08;MQSB=0.72137;RPB=0.806836;SGB=34.0735;VDB=0.288355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.7:13297476 chr07:013297476 0 W/13297476-13297476 FN3815-S SNP C -> T AC=1;AN=190;BQB=0.640898;DP=2607;DP4=1304,1215,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.56665e-10;MQSB=0.966934;RPB=0.019944;SGB=43.2083;VDB=0.324125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P506S|2266|LOC_Os07g23540|protein_coding|CODING|LOC_Os07g23540.1|5|1) FN3815-S.SNP.7:13297480 chr07:013297480 0 W/13297480-13297480 FN3815-S SNP C -> G AC=1;AN=190;BQB=0.16721;DP=2629;DP4=1333,1199,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.06063e-10;MQSB=0.997675;RPB=0.0152777;SGB=28.7675;VDB=0.544331;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S507C|2266|LOC_Os07g23540|protein_coding|CODING|LOC_Os07g23540.1|5|1) FN2378.SNP.7:13297798 chr07:013297798 0 W/13297798-13297798 FN2378 SNP G -> C AC=1;AN=192;BQB=0.798334;DP=4907;DP4=2457,2138,16,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.13503e-19;MQSB=0.997699;RPB=0.455705;SGB=35.5131;VDB=0.732669;EFF=INTRON(MODIFIER||||2266|LOC_Os07g23540|protein_coding|CODING|LOC_Os07g23540.1|5|1) FN581-S.SNP.7:13299789 chr07:013299789 0 W/13299789-13299789 FN581-S Single Base Substitution G-A INTRON HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2458.SNP.7:13302405 chr07:013302405 0 W/13302405-13302405 FN2458 SNP C -> T AC=1;AN=200;BQB=0.840081;DP=4523;DP4=2118,2079,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12693e-05;MQSB=0.631979;RPB=0.925021;SGB=40.2696;VDB=0.885519;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A1645|2266|LOC_Os07g23540|protein_coding|CODING|LOC_Os07g23540.1|13|1) FN1337-S.SNP.7:13302681 chr07:013302681 0 W/13302681-13302681 FN1337-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN883-S.SNP.7:13304769 chr07:013304769 0 W/13304769-13304769 FN883-S Single Base Substitution C-T INTRON HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN-291.SNP.7:13308060 chr07:013308060 0 W/13308060-13308060 FN-291 Single Base Substitution T-C INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN3815-S.SNP.7:13314738 chr07:013314738 0 W/13314738-13314738 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.987347;DP=2601;DP4=1274,1249,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.51456e-05;MQSB=0.977519;RPB=0.674128;SGB=26.3271;VDB=0.900235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G53S|248|LOC_Os07g23550|protein_coding|CODING|LOC_Os07g23550.1|2|1),INTRON(MODIFIER||||81|LOC_Os07g23550|protein_coding|CODING|LOC_Os07g23550.2|2|1) FN1151-S.SNP.7:13325155 chr07:013325155 0 W/13325155-13325155 FN1151-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1001-S.SNP.7:13330025 chr07:013330025 0 W/13330025-13330025 FN1001-S Single Base Substitution C-T INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN459-S.SNP.7:13330390 chr07:013330390 0 W/13330390-13330390 FN459-S Single Base Substitution G-A INTRON HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN1277-S.SNP.7:13331404 chr07:013331404 0 W/13331404-13331404 FN1277-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1277-S.SNP.7:13331405 chr07:013331405 0 W/13331405-13331405 FN1277-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN424-S.SNP.7:13341086 chr07:013341086 0 W/13341086-13341086 FN424-S Single Base Substitution G-C INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1109-S.SNP.7:13349159 chr07:013349159 0 W/13349159-13349159 FN1109-S Single Base Substitution A-G INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2496.SNP.7:13351845 chr07:013351845 0 W/13351845-13351845 FN2496 SNP C -> G AC=1;AN=200;BQB=0.999349;DP=3065;DP4=1660,1188,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58858e-06;MQSB=0.121561;RPB=0.517801;SGB=33.0593;VDB=0.409933;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.7:13354246 chr07:013354246 0 W/13354246-13354246 FN-127 Single Base Substitution G-A UTR_3_PRIME HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-381.SNP.7:13354395 chr07:013354395 0 W/13354395-13354395 FN-381 Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN4272-S.SNP.7:13360927 chr07:013360927 0 W/13360927-13360927 FN4272-S SNP C -> T AC=2;AN=170;BQB=0.767885;DP=2594;DP4=1089,1396,20,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.45124e-23;MQSB=0.840073;RPB=0.950432;SGB=85.8355;VDB=0.767373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.7:13367718 chr07:013367718 0 W/13367718-13367718 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.597184;DP=3636;DP4=1889,1697,14,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29732e-15;MQSB=0.917975;RPB=0.936702;SGB=-46.9043;VDB=0.912942;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.7:13372117 chr07:013372117 0 W/13372117-13372117 FN-285 Single Base Substitution T-C INTRON HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN761-S.SNP.7:13377394 chr07:013377394 0 W/13377394-13377394 FN761-S Single Base Substitution G-A INTRON HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN533-S.SNP.7:13381445 chr07:013381445 0 W/13381445-13381445 FN533-S Single Base Substitution G-C INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN906-S.SNP.7:13387952 chr07:013387952 0 W/13387952-13387952 FN906-S Single Base Substitution T-C INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2408.SNP.7:13388589 chr07:013388589 0 W/13388589-13388589 FN2408 SNP A -> T AC=1;AN=200;BQB=0.769586;DP=4729;DP4=2108,2345,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.28797e-10;MQSB=0.878239;RPB=0.921256;SGB=-14.3206;VDB=0.463906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.7:13388814 chr07:013388814 0 W/13388814-13388814 FN2271-S SNP C -> G AC=1;AN=190;BQB=0.322238;DP=4650;DP4=2229,2158,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.17575e-14;MQSB=0.994116;RPB=0.640395;SGB=85.8548;VDB=0.362479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.7:13389734 chr07:013389734 0 W/13389734-13389734 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.77019;DP=4857;DP4=2042,2501,15,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.86937e-20;MQSB=0.0837863;RPB=0.112925;SGB=77.2911;VDB=0.880076;EFF=INTRON(MODIFIER||||276|LOC_Os07g23730|protein_coding|CODING|LOC_Os07g23730.1|1|1) FN1394-S.SNP.7:13394288 chr07:013394288 0 W/13394288-13394288 FN1394-S Single Base Substitution A-T INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3930-S.SNP.7:13394519 chr07:013394519 0 W/13394519-13394519 FN3930-S SNP A -> G AC=1;AN=156;BQB=0.907596;DP=2034;DP4=800,1110,2,8;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.38314e-06;MQSB=0.257493;RPB=0.984903;SGB=38.3284;VDB=0.845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1198-S.SNP.7:13397116 chr07:013397116 0 W/13397116-13397116 FN1198-S Single Base Substitution T-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN2584-S.SNP.7:13397157 chr07:013397157 0 W/13397157-13397157 FN2584-S SNP C -> A AC=1;AN=198;BQB=0.994372;DP=4290;DP4=1914,2103,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.45972e-17;MQSB=0.590481;RPB=0.884924;SGB=73.4614;VDB=0.972587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.7:13397229 chr07:013397229 0 W/13397229-13397229 FN2361 SNP C -> G AC=1;AN=192;BQB=0.138454;DP=5208;DP4=2395,2406,19,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000192012;MQB=4.6369e-11;MQSB=0.00216507;RPB=0.996149;SGB=-9.12519;VDB=0.798162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.7:13405394 chr07:013405394 0 W/13405394-13405394 FN2491 SNP G -> A AC=2;AN=200;BQB=0.973831;DP=4779;DP4=2089,2415,18,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.03445e-21;MQSB=0.994397;RPB=0.320599;SGB=141.763;VDB=0.0113995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A242T|580|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A215T|553|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A164T|502|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.3|5|1) FN2491.SNP.7:13405395 chr07:013405395 0 W/13405395-13405395 FN2491 SNP C -> T AC=2;AN=200;BQB=0.999093;DP=4758;DP4=2097,2392,20,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.95778e-22;MQSB=0.991589;RPB=0.265948;SGB=119.583;VDB=0.0160341;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A242V|580|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A215V|553|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A164V|502|LOC_Os07g23740|protein_coding|CODING|LOC_Os07g23740.3|5|1) FN702-S.SNP.7:13415831 chr07:013415831 0 W/13415831-13415831 FN702-S Single Base Substitution C-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2703-S.SNP.7:13420849 chr07:013420849 0 W/13420849-13420849 FN2703-S SNP C -> A AC=1;AN=200;BQB=0.0262839;DP=4414;DP4=1985,1953,4,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00589035;MQB=0.0494846;MQSB=0.00150105;RPB=0.989058;SGB=18.639;VDB=0.793142;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.7:13432293 chr07:013432293 0 W/13432293-13432293 FN-194 Single Base Substitution C-T INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3502-S.SNP.7:13435086 chr07:013435086 0 W/13435086-13435086 FN3502-S SNP G -> T AC=1;AN=188;BQB=0.94805;DP=2576;DP4=1197,1301,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.79046e-07;MQSB=0.96453;RPB=0.886939;SGB=25.3545;VDB=0.713137;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.7:13435154 chr07:013435154 0 W/13435154-13435154 FN979-S Single Base Substitution T-C INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN1203-S.SNP.7:13441996 chr07:013441996 0 W/13441996-13441996 FN1203-S Single Base Substitution A-C INTRON HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1240-S.SNP.7:13458405 chr07:013458405 0 W/13458405-13458405 FN1240-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2213-S.SNP.7:13459656 chr07:013459656 0 W/13459656-13459656 FN2213-S SNP C -> T AC=1;AN=190;BQB=0.912808;DP=4015;DP4=1743,1860,5,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000498132;MQB=4.5519e-10;MQSB=0.00338931;RPB=0.995592;SGB=68.0854;VDB=0.121455;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L60|838|LOC_Os07g23830|protein_coding|CODING|LOC_Os07g23830.1|2|1) FN-126.SNP.7:13463032 chr07:013463032 0 W/13463032-13463032 FN-126 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g23840 retrotransposon protein, putative, unclassified, expressed SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1170-S.SNP.7:13475354 chr07:013475354 0 W/13475354-13475354 FN1170-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1046-S.SNP.7:13475601 chr07:013475601 0 W/13475601-13475601 FN1046-S Single Base Substitution A-G INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1400-S.SNP.7:13483217 chr07:013483217 0 W/13483217-13483217 FN1400-S Single Base Substitution C-T INTRON HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2172-S.SNP.7:13484420 chr07:013484420 0 W/13484420-13484420 FN2172-S SNP T -> A AC=2;AN=168;BQB=0.212955;DP=3506;DP4=1482,1941,21,31;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0011409;MQB=0.73167;MQSB=0.210813;RPB=0.378993;SGB=-0.724748;VDB=0.869969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.7:13486126 chr07:013486126 0 W/13486126-13486126 FN3391-S SNP A -> G AC=1;AN=184;BQB=0.764721;DP=3160;DP4=1752,1315,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.94079e-05;MQSB=0.868189;RPB=0.997334;SGB=13.188;VDB=0.82146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.7:13489243 chr07:013489243 0 W/13489243-13489243 FN1229-S Single Base Substitution T-C INTRON HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1353-S.SNP.7:13489887 chr07:013489887 0 W/13489887-13489887 FN1353-S Single Base Substitution A-G INTRON HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-73.SNP.7:13491290 chr07:013491290 0 W/13491290-13491290 FN-73 Single Base Substitution G-A INTRON HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1272-S.SNP.7:13497752 chr07:013497752 0 W/13497752-13497752 FN1272-S Single Base Substitution C-T INTRON HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1718-S.SNP.7:13497752 chr07:013497752 0 W/13497752-13497752 FN1718-S SNP C -> T AC=1;AN=188;BQB=0.0823562;DP=4196;DP4=2063,2057,18,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.9618e-13;MQSB=0.983895;RPB=0.348265;SGB=-252.818;VDB=0.630728;EFF=INTRON(MODIFIER||||1057|LOC_Os07g23880|protein_coding|CODING|LOC_Os07g23880.1|20|1) FN3419-S.SNP.7:13497752 chr07:013497752 0 W/13497752-13497752 FN3419-S SNP C -> T AC=2;AN=184;BQB=0.755447;DP=2762;DP4=1300,1370,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.97488e-18;MQSB=0.98129;RPB=0.78724;SGB=130.135;VDB=0.587305;EFF=INTRON(MODIFIER||||1057|LOC_Os07g23880|protein_coding|CODING|LOC_Os07g23880.1|20|1) FN441-S.SNP.7:13497752 chr07:013497752 0 W/13497752-13497752 FN441-S Single Base Substitution C-T INTRON HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2333.SNP.7:13507882 chr07:013507882 0 W/13507882-13507882 FN2333 SNP G -> A AC=1;AN=192;BQB=0.0880466;DP=5022;DP4=2262,2363,9,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.16935e-14;MQSB=0.989675;RPB=0.941895;SGB=-112.981;VDB=0.828849;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.7:13522317 chr07:013522317 0 W/13522317-13522317 FN2157-S SNP T -> A AC=1;AN=168;BQB=0.913905;DP=3899;DP4=2051,1802,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0146191;MQB=1.61335e-06;MQSB=0.0497742;RPB=0.377189;SGB=-11.926;VDB=0.562478;EFF=INTRON(MODIFIER||||781|LOC_Os07g23920|protein_coding|CODING|LOC_Os07g23920.1|5|1) FN3829-S.SNP.7:13539912 chr07:013539912 0 W/13539912-13539912 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.891217;DP=2644;DP4=1248,1336,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26808e-05;MQSB=0.969582;RPB=0.752059;SGB=25.439;VDB=0.877807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E204K|980|LOC_Os07g23944|protein_coding|CODING|LOC_Os07g23944.1|5|1) FN2671-S.SNP.7:13540924 chr07:013540924 0 W/13540924-13540924 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.182098;DP=4977;DP4=2434,2349,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77453e-07;MQSB=0.999159;RPB=0.996661;SGB=6.27959;VDB=0.0477568;EFF=INTRON(MODIFIER||||980|LOC_Os07g23944|protein_coding|CODING|LOC_Os07g23944.1|6|1) FN860-S.SNP.7:13541399 chr07:013541399 0 W/13541399-13541399 FN860-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g23944 glycosyl hydrolase, family 31, putative, expressed SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN4241-S.SNP.7:13542282 chr07:013542282 0 W/13542282-13542282 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.985072;DP=2508;DP4=1185,1260,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.75084e-07;MQSB=0.906685;RPB=0.921005;SGB=43.4296;VDB=0.0583733;EFF=INTRON(MODIFIER||||980|LOC_Os07g23944|protein_coding|CODING|LOC_Os07g23944.1|10|1) FN3324-S.SNP.7:13547977 chr07:013547977 0 W/13547977-13547977 FN3324-S SNP A -> T AC=1;AN=184;BQB=0.99481;DP=2586;DP4=1292,1212,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32122e-08;MQSB=0.990989;RPB=0.981786;SGB=3.75875;VDB=0.938866;EFF=INTRON(MODIFIER||||980|LOC_Os07g23944|protein_coding|CODING|LOC_Os07g23944.1|20|1) FN4083-S.SNP.7:13554147 chr07:013554147 0 W/13554147-13554147 FN4083-S SNP A -> T AC=1;AN=182;BQB=0.965055;DP=2975;DP4=1570,1312,14,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.19387e-14;MQSB=0.904795;RPB=0.882578;SGB=77.758;VDB=0.802079;EFF=INTERGENIC(MODIFIER||||||||||1) FN-252.SNP.7:13555668 chr07:013555668 0 W/13555668-13555668 FN-252 Single Base Substitution T-C INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN3846-S.SNP.7:13562933 chr07:013562933 0 W/13562933-13562933 FN3846-S SNP A -> G AC=1;AN=190;BQB=0.810136;DP=2475;DP4=938,1464,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08603e-09;MQSB=0.938453;RPB=0.99501;SGB=23.6597;VDB=0.161376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.7:13563189 chr07:013563189 0 W/13563189-13563189 FN2284 SNP C -> T AC=1;AN=192;BQB=0.999998;DP=4703;DP4=2290,2118,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.64748e-09;MQSB=0.807224;RPB=0.778428;SGB=46.9087;VDB=0.543287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.7:13564181 chr07:013564181 0 W/13564181-13564181 FN2304 SNP C -> T AC=1;AN=192;BQB=0.595124;DP=4409;DP4=1582,2425,14,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.7527e-15;MQSB=4.05027e-07;RPB=0.969115;SGB=-117.852;VDB=0.801027;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.7:13578438 chr07:013578438 0 W/13578438-13578438 FN513-S Single Base Substitution G-A INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2441.SNP.7:13578981 chr07:013578981 0 W/13578981-13578981 FN2441 SNP T -> C AC=2;AN=200;BQB=0.0384657;DP=2597;DP4=927,1014,16,24;HOB=0.0198;ICB=0.495051;MQ=33;MQ0F=0.0731613;MQB=0.971378;MQSB=0;RPB=0.104866;SGB=27.3216;VDB=0.706222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.7:13610676 chr07:013610676 0 W/13610676-13610676 FN3909-S SNP C -> T AC=1;AN=158;BQB=0.973343;DP=2291;DP4=1119,1059,13,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000872981;MQB=8.49928e-06;MQSB=0.595903;RPB=0.997378;SGB=77.6532;VDB=0.444117;EFF=INTERGENIC(MODIFIER||||||||||1) FN866-S.SNP.7:13617758 chr07:013617758 0 W/13617758-13617758 FN866-S Single Base Substitution A-G INTERGENIC HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN2448.SNP.7:13621939 chr07:013621939 0 W/13621939-13621939 FN2448 SNP A -> T AC=1;AN=200;BQB=0.648615;DP=4664;DP4=2332,2118,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.87089e-10;MQSB=0.995581;RPB=0.945067;SGB=58.2954;VDB=0.0937748;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.7:13623073 chr07:013623073 0 W/13623073-13623073 FN899-S Single Base Substitution C-G INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN589-S.SNP.7:13625539 chr07:013625539 0 W/13625539-13625539 FN589-S Single Base Substitution A-T INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1003-S.SNP.7:13626063 chr07:013626063 0 W/13626063-13626063 FN1003-S Single Base Substitution G-A INTERGENIC HOMO SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1115-S.SNP.7:13626533 chr07:013626533 0 W/13626533-13626533 FN1115-S Single Base Substitution C-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3806-S.SNP.7:13629242 chr07:013629242 0 W/13629242-13629242 FN3806-S SNP C -> T AC=2;AN=190;BQB=0.688887;DP=2798;DP4=1255,1431,18,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.81724e-18;MQSB=0.845839;RPB=0.924738;SGB=126.511;VDB=0.480478;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.7:13629607 chr07:013629607 0 W/13629607-13629607 FN4075-S SNP C -> T AC=1;AN=182;BQB=0.999244;DP=2686;DP4=1299,1320,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.26677e-09;MQSB=0.986105;RPB=0.7723;SGB=66.6657;VDB=0.38248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.7:13632673 chr07:013632673 0 W/13632673-13632673 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.710531;DP=3336;DP4=1831,1457,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00179856;MQB=1.32349e-10;MQSB=0.662895;RPB=0.577407;SGB=78.5038;VDB=0.661586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.7:13633802 chr07:013633802 0 W/13633802-13633802 FN2540-S SNP C -> A AC=1;AN=198;BQB=0.35868;DP=4151;DP4=1956,2034,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00144543;MQB=4.32508e-07;MQSB=0.744358;RPB=0.975416;SGB=50.9344;VDB=0.656995;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.7:13642393 chr07:013642393 0 W/13642393-13642393 FN-203 Single Base Substitution C-T INTRON HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN1060-S.SNP.7:13647820 chr07:013647820 0 W/13647820-13647820 FN1060-S Single Base Substitution T-C INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2533-S.SNP.7:13653932 chr07:013653932 0 W/13653932-13653932 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.889778;DP=4242;DP4=1971,2046,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17163e-06;MQSB=0.895616;RPB=0.942192;SGB=16.3688;VDB=0.733862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.7:13658890 chr07:013658890 0 W/13658890-13658890 FN-345 Single Base Substitution A-G INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3355-S.SNP.7:13659395 chr07:013659395 0 W/13659395-13659395 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.951883;DP=3658;DP4=1649,1888,17,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.93344e-11;MQSB=0.589186;RPB=0.427177;SGB=130.135;VDB=0.0627534;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.7:13661361 chr07:013661361 0 W/13661361-13661361 FN864-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g24100 retrotransposon protein, putative, unclassified, expressed SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN1407-S.SNP.7:13662741 chr07:013662741 0 W/13662741-13662741 FN1407-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g24100 retrotransposon protein, putative, unclassified, expressed SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1443-S.SNP.7:13669211 chr07:013669211 0 W/13669211-13669211 FN1443-S Single Base Substitution C-T INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN2204-S.SNP.7:13671785 chr07:013671785 0 W/13671785-13671785 FN2204-S SNP G -> C AC=1;AN=190;BQB=0.867851;DP=4994;DP4=2088,2543,13,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.97833e-22;MQSB=0.72853;RPB=0.9986;SGB=132.055;VDB=0.183049;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.7:13672517 chr07:013672517 0 W/13672517-13672517 FN3559-S SNP G -> A AC=1;AN=188;BQB=0.958983;DP=4027;DP4=1987,1953,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.53707e-12;MQSB=0.137014;RPB=0.891041;SGB=67.8739;VDB=0.787738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.7:13680226 chr07:013680226 0 W/13680226-13680226 FN1097-S Single Base Substitution A-C INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2577-S.SNP.7:13680781 chr07:013680781 0 W/13680781-13680781 FN2577-S SNP C -> T AC=1;AN=186;BQB=0.975792;DP=3207;DP4=1700,1350,4,2;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.000286149;MQSB=0.866893;RPB=0.0755069;SGB=21.981;VDB=0.210772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.7:13681933 chr07:013681933 0 W/13681933-13681933 FN2791-S SNP C -> T AC=2;AN=186;BQB=0.0567507;DP=3308;DP4=1709,1332,25,29;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=5.23973e-25;MQSB=0.991857;RPB=0.335983;SGB=205.383;VDB=0.0388988;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.7:13683476 chr07:013683476 0 W/13683476-13683476 W385-6-8-4 Single Base Substitution C-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN2080-S.SNP.7:13683830 chr07:013683830 0 W/13683830-13683830 FN2080-S SNP C -> T AC=1;AN=168;BQB=0.00410371;DP=3020;DP4=1705,1262,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0523179;MQB=0.639489;MQSB=3.46396e-31;RPB=0.451447;SGB=-164.05;VDB=0.35534;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.7:13684359 chr07:013684359 0 W/13684359-13684359 FN3421-S SNP C -> A AC=1;AN=184;BQB=0.820314;DP=3916;DP4=2287,1430,22,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.99077e-09;MQSB=0.0347035;RPB=0.99851;SGB=48.493;VDB=0.391218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.7:13685678 chr07:013685678 0 W/13685678-13685678 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.00333526;DP=2857;DP4=1513,1142,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00280014;MQB=0.397725;MQSB=0.000353651;RPB=0.887779;SGB=25.7687;VDB=0.839156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.7:13687595 chr07:013687595 0 W/13687595-13687595 FN1488-S Single Base Substitution G-A INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN903-S.SNP.7:13692108 chr07:013692108 0 W/13692108-13692108 FN903-S Single Base Substitution T-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN4152-S.SNP.7:13693304 chr07:013693304 0 W/13693304-13693304 FN4152-S SNP C -> A AC=1;AN=170;BQB=0.976683;DP=2670;DP4=1416,1147,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.76467e-09;MQSB=0.980482;RPB=0.593316;SGB=65.6427;VDB=0.601875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.7:13694612 chr07:013694612 0 W/13694612-13694612 FN-407 Single Base Substitution C-A INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN224-S.SNP.7:13699195 chr07:013699195 0 W/13699195-13699195 FN224-S Single Base Substitution A-T INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1216-S.SNP.7:13701236 chr07:013701236 0 W/13701236-13701236 FN1216-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1484-S.SNP.7:13702283 chr07:013702283 0 W/13702283-13702283 FN1484-S Single Base Substitution C-T INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2392.SNP.7:13704070 chr07:013704070 0 W/13704070-13704070 FN2392 SNP G -> A AC=1;AN=200;BQB=0.996015;DP=4000;DP4=1760,1960,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16044e-07;MQSB=0.174972;RPB=0.952187;SGB=49.6594;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.7:13710095 chr07:013710095 0 W/13710095-13710095 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.988393;DP=4408;DP4=2127,2035,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67196e-11;MQSB=0.950035;RPB=0.493289;SGB=15.9106;VDB=0.387073;EFF=INTERGENIC(MODIFIER||||||||||1) FN696-S.SNP.7:13711245 chr07:013711245 0 W/13711245-13711245 FN696-S Single Base Substitution C-G INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2529-S.SNP.7:13712305 chr07:013712305 0 W/13712305-13712305 FN2529-S SNP A -> C AC=1;AN=198;BQB=0.969183;DP=4000;DP4=2083,1730,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.08944e-09;MQSB=0.799841;RPB=0.242433;SGB=58.7391;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.7:13720228 chr07:013720228 0 W/13720228-13720228 FN3637-S SNP G -> C AC=1;AN=190;BQB=0.847643;DP=2637;DP4=1377,1060,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94689e-05;MQSB=0.577457;RPB=0.56963;SGB=-3.65821;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.7:13721682 chr07:013721682 0 W/13721682-13721682 FN3795-S SNP T -> C AC=1;AN=190;BQB=0.592319;DP=2592;DP4=1264,1242,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00462963;MQB=0.00116629;MQSB=1.01566e-17;RPB=0.0663646;SGB=21.1058;VDB=0.282173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.7:13724565 chr07:013724565 0 W/13724565-13724565 FN3714-S SNP A -> T AC=1;AN=190;BQB=0.605223;DP=3039;DP4=1337,1541,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00921356;MQB=0.680776;MQSB=0.212496;RPB=0.0529757;SGB=13.4344;VDB=0.270237;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.7:13736544 chr07:013736544 0 W/13736544-13736544 FN942-S Single Base Substitution G-T INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN462-S.SNP.7:13742987 chr07:013742987 0 W/13742987-13742987 FN462-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g24190 CESA3 - cellulose synthase, expressed SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2551-S.SNP.7:13762351 chr07:013762351 0 W/13762351-13762351 FN2551-S SNP T -> C AC=1;AN=198;BQB=0.693338;DP=4144;DP4=1666,2283,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.8925e-13;MQSB=0.997089;RPB=0.631233;SGB=95.5;VDB=0.298684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.7:13764602 chr07:013764602 0 W/13764602-13764602 FN2235-S SNP T -> A AC=1;AN=190;BQB=0.323855;DP=4430;DP4=2419,1634,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5468e-09;MQSB=0.999466;RPB=0.789427;SGB=11.8805;VDB=0.969249;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.7:13766065 chr07:013766065 0 W/13766065-13766065 FN-365 Single Base Substitution T-G INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN-151.SNP.7:13770505 chr07:013770505 0 W/13770505-13770505 FN-151 Single Base Substitution T-A INTRON HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1080-S.SNP.7:13776145 chr07:013776145 0 W/13776145-13776145 FN1080-S Single Base Substitution T-A INTERGENIC HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN669-S.SNP.7:13778195 chr07:013778195 0 W/13778195-13778195 FN669-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g24230 integral membrane transporter family protein, putative, expressed SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3520-S.SNP.7:13783748 chr07:013783748 0 W/13783748-13783748 FN3520-S SNP C -> T AC=1;AN=188;BQB=0.957459;DP=3317;DP4=1402,1829,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87044e-10;MQSB=0.439495;RPB=0.749008;SGB=33.7061;VDB=0.733157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.7:13785784 chr07:013785784 0 W/13785784-13785784 FN3764-S SNP T -> G AC=1;AN=190;BQB=0.951344;DP=3015;DP4=1595,1301,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000159608;MQSB=0.999324;RPB=0.985519;SGB=30.8803;VDB=0.957126;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aCt|N71T|529|LOC_Os07g24240|protein_coding|CODING|LOC_Os07g24240.1|1|1) FN3764-S.SNP.7:13785785 chr07:013785785 0 W/13785785-13785785 FN3764-S SNP T -> A AC=1;AN=190;BQB=0.91493;DP=3013;DP4=1601,1264,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.16193e-05;MQSB=0.981238;RPB=0.949;SGB=26.3271;VDB=0.913443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N71Y|529|LOC_Os07g24240|protein_coding|CODING|LOC_Os07g24240.1|1|1) FN2083-S.SNP.7:13794517 chr07:013794517 0 W/13794517-13794517 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.879736;DP=2767;DP4=1112,1607,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00361402;MQB=0.000312942;MQSB=5.10217e-08;RPB=0.834131;SGB=-41.2125;VDB=0.0536644;EFF=INTRON(MODIFIER||||258|LOC_Os07g24260|protein_coding|CODING|LOC_Os07g24260.1|1|1) FN-164.SNP.7:13809645 chr07:013809645 0 W/13809645-13809645 FN-164 Single Base Substitution C-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN3896-S.SNP.7:13826061 chr07:013826061 0 W/13826061-13826061 FN3896-S SNP T -> G AC=1;AN=158;BQB=0.952208;DP=2324;DP4=1093,1133,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.66457e-09;MQSB=0.294607;RPB=0.629886;SGB=37.4429;VDB=0.859771;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccG|P344|1915|LOC_Os07g24310|protein_coding|CODING|LOC_Os07g24310.1|2|1) FN3896-S.SNP.7:13826062 chr07:013826062 0 W/13826062-13826062 FN3896-S SNP C -> A AC=1;AN=158;BQB=0.583518;DP=2321;DP4=1115,1131,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.13376e-08;MQSB=0.358507;RPB=0.812312;SGB=51.4366;VDB=0.863887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q345K|1915|LOC_Os07g24310|protein_coding|CODING|LOC_Os07g24310.1|2|1) FN2583-S.SNP.7:13828211 chr07:013828211 0 W/13828211-13828211 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.995088;DP=4827;DP4=2209,2252,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44686e-07;MQSB=0.994957;RPB=0.712871;SGB=21.6694;VDB=0.389015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G1023V|1915|LOC_Os07g24310|protein_coding|CODING|LOC_Os07g24310.1|3|1) FN3308-S.SNP.7:13832977 chr07:013832977 0 W/13832977-13832977 FN3308-S SNP G -> A AC=2;AN=184;BQB=0.990868;DP=3440;DP4=1775,1550,31,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23602e-23;MQSB=0.964617;RPB=0.973789;SGB=202.483;VDB=0.431006;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A416|698|LOC_Os07g24320|protein_coding|CODING|LOC_Os07g24320.1|4|1) FN865-S.SNP.7:13835807 chr07:013835807 0 W/13835807-13835807 FN865-S Single Base Substitution C-T INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. 703-4.SNP.7:13839168 chr07:013839168 0 W/13839168-13839168 703-4 Single Base Substitution C-T INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2683-S.SNP.7:13840115 chr07:013840115 0 W/13840115-13840115 FN2683-S SNP G -> A AC=2;AN=200;BQB=0.232769;DP=5197;DP4=2640,2250,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.09226e-26;MQSB=0.938459;RPB=0.877584;SGB=137.609;VDB=0.526877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.7:13840605 chr07:013840605 0 W/13840605-13840605 FN1661-S Single Base Substitution A-G INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN-67.SNP.7:13843077 chr07:013843077 0 W/13843077-13843077 FN-67 Single Base Substitution G-A INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN-67.SNP.7:13843078 chr07:013843078 0 W/13843078-13843078 FN-67 Single Base Substitution C-A INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN-67.SNP.7:13843080 chr07:013843080 0 W/13843080-13843080 FN-67 Single Base Substitution C-T INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN1638-S.SNP.7:13843551 chr07:013843551 0 W/13843551-13843551 FN1638-S Single Base Substitution G-A INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1402-S.SNP.7:13850780 chr07:013850780 0 W/13850780-13850780 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3771-S.SNP.7:13854683 chr07:013854683 0 W/13854683-13854683 FN3771-S SNP C -> A AC=1;AN=190;BQB=0.972341;DP=2360;DP4=1156,1090,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.51506e-08;MQSB=0.895369;RPB=0.87821;SGB=39.6545;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.7:13860928 chr07:013860928 0 W/13860928-13860928 FN2545-S SNP C -> T AC=1;AN=188;BQB=0.66914;DP=3901;DP4=1730,1982,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99161e-05;MQSB=0.949533;RPB=0.57922;SGB=25.7687;VDB=0.637029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.7:13863333 chr07:013863333 0 W/13863333-13863333 FN2259-S SNP G -> T AC=1;AN=190;BQB=0.664343;DP=4854;DP4=2135,2396,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206016;MQB=2.86016e-10;MQSB=0.297796;RPB=0.707199;SGB=71.8647;VDB=0.830467;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.7:13867791 chr07:013867791 0 W/13867791-13867791 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN856-S.SNP.7:13875329 chr07:013875329 0 W/13875329-13875329 FN856-S Single Base Substitution T-G INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2680-S.SNP.7:13876223 chr07:013876223 0 W/13876223-13876223 FN2680-S SNP C -> G AC=1;AN=200;BQB=0.884901;DP=4751;DP4=2455,2034,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.70713e-13;MQSB=0.874717;RPB=0.749228;SGB=69.1109;VDB=0.422935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.7:13883151 chr07:013883151 0 W/13883151-13883151 FN2175-S SNP C -> G AC=1;AN=168;BQB=0.317177;DP=3118;DP4=952,2128,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000320718;MQB=1.50766e-11;MQSB=0.972068;RPB=0.999723;SGB=39.2004;VDB=0.0224788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.7:13883208 chr07:013883208 0 W/13883208-13883208 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3787-S.SNP.7:13883582 chr07:013883582 0 W/13883582-13883582 FN3787-S SNP C -> T AC=2;AN=190;BQB=0.685423;DP=3735;DP4=1788,1795,26,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.72663e-29;MQSB=0.824142;RPB=0.335343;SGB=244.912;VDB=0.690109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.7:13888177 chr07:013888177 0 W/13888177-13888177 FN2768-S SNP C -> A AC=1;AN=190;BQB=0.998739;DP=3941;DP4=1916,1820,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16168e-11;MQSB=0.987095;RPB=0.0141209;SGB=61.7198;VDB=0.00602299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.7:13890751 chr07:013890751 0 W/13890751-13890751 FN2597-S SNP C -> T AC=1;AN=186;BQB=0.588017;DP=3948;DP4=1814,1910,4,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.46284e-06;MQSB=0.872787;RPB=0.99943;SGB=40.3588;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.7:13894133 chr07:013894133 0 W/13894133-13894133 FN-81 Single Base Substitution C-T INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN3404-S.SNP.7:13897092 chr07:013897092 0 W/13897092-13897092 FN3404-S SNP T -> G AC=1;AN=184;BQB=0.961789;DP=2846;DP4=1378,1372,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.75624e-06;MQSB=0.994932;RPB=0.270995;SGB=35.1773;VDB=0.147629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.7:13898192 chr07:013898192 0 W/13898192-13898192 FN1521-S Single Base Substitution G-T INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2474.SNP.7:13898611 chr07:013898611 0 W/13898611-13898611 FN2474 SNP G -> C AC=1;AN=200;BQB=0.467789;DP=4442;DP4=2478,1646,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.28552e-10;MQSB=0.602776;RPB=0.568354;SGB=61.9006;VDB=0.325946;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.7:13899915 chr07:013899915 0 W/13899915-13899915 W591-4-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g24410 retrotransposon protein, putative, unclassified SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN873-S.SNP.7:13900523 chr07:013900523 0 W/13900523-13900523 FN873-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g24410 retrotransposon protein, putative, unclassified SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN4258-S.SNP.7:13901624 chr07:013901624 0 W/13901624-13901624 FN4258-S SNP G -> A AC=1;AN=170;BQB=0.741412;DP=2448;DP4=929,1444,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.65561e-06;MQSB=0.443259;RPB=0.140886;SGB=1.44716;VDB=0.33346;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.7:13903842 chr07:013903842 0 W/13903842-13903842 FN-344 Single Base Substitution T-C INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2192-S.SNP.7:13906287 chr07:013906287 0 W/13906287-13906287 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.0700951;DP=2098;DP4=799,1052,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00953289;MQB=0.336996;MQSB=0.702444;RPB=0.553221;SGB=30.8803;VDB=0.387294;EFF=INTRON(MODIFIER||||201|LOC_Os07g24420|protein_coding|CODING|LOC_Os07g24420.1|2|1) FN3815-S.SNP.7:13907248 chr07:013907248 0 W/13907248-13907248 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.770824;DP=3518;DP4=1847,1564,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000284252;MQB=0.00202916;MQSB=0.862562;RPB=0.826984;SGB=21.8853;VDB=0.920352;EFF=SPLICE_SITE_REGION(LOW||||201|LOC_Os07g24420|protein_coding|CODING|LOC_Os07g24420.1|1|1),INTRON(MODIFIER||||201|LOC_Os07g24420|protein_coding|CODING|LOC_Os07g24420.1|1|1) FN1358-S.SNP.7:13931308 chr07:013931308 0 W/13931308-13931308 FN1358-S Single Base Substitution T-C INTRON HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN3064-S.SNP.7:13935676 chr07:013935676 0 W/13935676-13935676 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.995909;DP=3895;DP4=1851,1935,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.0875481;MQB=0.612073;MQSB=0.260506;RPB=0.944396;SGB=39.2697;VDB=0.400447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.7:13947360 chr07:013947360 0 W/13947360-13947360 FN2320 SNP T -> G AC=1;AN=192;BQB=0.923166;DP=5107;DP4=2065,2446,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0307421;MQB=0.585033;MQSB=1.9436e-09;RPB=0.728257;SGB=-67.3721;VDB=0.938057;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.7:13957602 chr07:013957602 0 W/13957602-13957602 FN1421-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g24520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2572-S.SNP.7:13968602 chr07:013968602 0 W/13968602-13968602 FN2572-S SNP C -> T AC=2;AN=186;BQB=0.884438;DP=3607;DP4=1723,1618,40,27;HOB=0.0212741;ICB=0.494682;MQ=30;MQ0F=0.0806765;MQB=0.999835;MQSB=0.0159121;RPB=0.948604;SGB=258.609;VDB=0.0601131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.7:13968602 chr07:013968602 0 W/13968602-13968602 FN2572-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1153-S.SNP.7:13991280 chr07:013991280 0 W/13991280-13991280 FN1153-S Single Base Substitution T-C INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN507-S.SNP.7:14001740 chr07:014001740 0 W/14001740-14001740 FN507-S Single Base Substitution A-G INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN1065-S.SNP.7:14002345 chr07:014002345 0 W/14002345-14002345 FN1065-S Single Base Substitution G-A INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN596-S.SNP.7:14004292 chr07:014004292 0 W/14004292-14004292 FN596-S Single Base Substitution G-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN3979-S.SNP.7:14004299 chr07:014004299 0 W/14004299-14004299 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.458882;DP=1914;DP4=718,1111,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0015674;MQB=7.58732e-05;MQSB=0.0869923;RPB=0.797284;SGB=47.7421;VDB=0.331213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.7:14004300 chr07:014004300 0 W/14004300-14004300 FN3979-S SNP C -> A AC=1;AN=168;BQB=0.978398;DP=1918;DP4=718,1107,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00156413;MQB=3.81767e-05;MQSB=0.172262;RPB=0.725367;SGB=52.1728;VDB=0.502892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.7:14005388 chr07:014005388 0 W/14005388-14005388 FN2620-S SNP A -> T AC=1;AN=198;BQB=0.285242;DP=3907;DP4=2264,1408,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00742257;MQB=5.42846e-09;MQSB=0.962092;RPB=0.73768;SGB=60.4858;VDB=0.0390559;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.7:14005594 chr07:014005594 0 W/14005594-14005594 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1586-S.SNP.7:14007907 chr07:014007907 0 W/14007907-14007907 FN1586-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g24620 retrotransposon protein, putative, unclassified, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN-60.SNP.7:14012910 chr07:014012910 0 W/14012910-14012910 FN-60 Single Base Substitution A-G INTRON HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1678-S.SNP.7:14013103 chr07:014013103 0 W/14013103-14013103 FN1678-S SNP G -> C AC=1;AN=188;BQB=0.700703;DP=2950;DP4=1284,1634,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00440678;MQB=0.0371744;MQSB=0.00844054;RPB=0.965022;SGB=21.8113;VDB=0.978983;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R54P|142|LOC_Os07g24630|protein_coding|CODING|LOC_Os07g24630.1|2|1) FN-386.SNP.7:14013198 chr07:014013198 0 W/14013198-14013198 FN-386 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g24630 retrotransposon, putative, centromere-specific SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN4001-S.SNP.7:14024109 chr07:014024109 0 W/14024109-14024109 FN4001-S SNP C -> T AC=1;AN=168;BQB=0.839565;DP=2497;DP4=1289,1095,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000334662;MQSB=0.983045;RPB=0.613009;SGB=38.8805;VDB=0.0898753;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.7:14025333 chr07:014025333 0 W/14025333-14025333 FN927-S Single Base Substitution T-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN-120.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN-120 Single Base Substitution C-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-167.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN-167 Single Base Substitution C-T INTERGENIC HOMO SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1623-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN1623-S Single Base Substitution C-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1697-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN1697-S SNP C -> T AC=2;AN=188;BQB=0.39627;DP=3337;DP4=1772,1501,26,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.15952e-16;MQSB=0.999336;RPB=0.67359;SGB=-140.488;VDB=0.940709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.731002;DP=3647;DP4=1880,1722,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52673e-08;MQSB=0.968063;RPB=0.996901;SGB=7.05233;VDB=0.765159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.0636646;DP=5102;DP4=2531,2287,11,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06181e-08;MQSB=0.969891;RPB=0.908863;SGB=54.2646;VDB=0.502892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.923703;DP=2837;DP4=1255,1494,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19615e-10;MQSB=0.99767;RPB=0.935874;SGB=53.3568;VDB=0.745488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN3566-S SNP C -> T AC=2;AN=188;BQB=0.914904;DP=2767;DP4=1283,1394,14,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.14108e-15;MQSB=0.931662;RPB=0.514453;SGB=108.042;VDB=0.15983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN3906-S SNP C -> T AC=2;AN=158;BQB=0.998584;DP=2498;DP4=1117,1278,10,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.06345e-09;MQSB=0.999858;RPB=0.997274;SGB=40.8124;VDB=0.404688;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN456-S Single Base Substitution C-T INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN591-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN591-S Single Base Substitution C-T INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN837-S Single Base Substitution C-T INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN947-S.SNP.7:14026266 chr07:014026266 0 W/14026266-14026266 FN947-S Single Base Substitution C-T INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN4203-S.SNP.7:14027673 chr07:014027673 0 W/14027673-14027673 FN4203-S SNP T -> A AC=1;AN=170;BQB=0.00652803;DP=2606;DP4=1094,1404,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000121451;MQSB=0.989255;RPB=0.77647;SGB=41.7633;VDB=0.998977;EFF=INTRON(MODIFIER||||750|LOC_Os07g24660|protein_coding|CODING|LOC_Os07g24660.1|1|1) FN1427-S.SNP.7:14029344 chr07:014029344 0 W/14029344-14029344 FN1427-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g24660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN3354-S.SNP.7:14030101 chr07:014030101 0 W/14030101-14030101 FN3354-S SNP C -> G AC=1;AN=184;BQB=0.971969;DP=3195;DP4=1869,1213,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00344288;MQB=0.000588218;MQSB=0.274487;RPB=0.913748;SGB=35.1773;VDB=0.2421;EFF=INTERGENIC(MODIFIER||||||||||1) FN992-S.SNP.7:14032278 chr07:014032278 0 W/14032278-14032278 FN992-S Single Base Substitution G-A INTERGENIC HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN242-S.SNP.7:14036000 chr07:014036000 0 W/14036000-14036000 FN242-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g24670 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2147-S.SNP.7:14037660 chr07:014037660 0 W/14037660-14037660 FN2147-S SNP C -> A AC=1;AN=168;BQB=0.0160579;DP=3367;DP4=2277,1055,23,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.001188;MQB=0.984231;MQSB=0.175737;RPB=0.123352;SGB=-133.625;VDB=0.22256;EFF=INTRON(MODIFIER||||166|LOC_Os07g24670|protein_coding|CODING|LOC_Os07g24670.1|1|1) FN812-S.SNP.7:14039363 chr07:014039363 0 W/14039363-14039363 FN812-S Single Base Substitution C-T INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN485-S.SNP.7:14042776 chr07:014042776 0 W/14042776-14042776 FN485-S Single Base Substitution G-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1379-S.SNP.7:14044458 chr07:014044458 0 W/14044458-14044458 FN1379-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g24690 retrotransposon protein, putative, unclassified, expressed SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2355.SNP.7:14049193 chr07:014049193 0 W/14049193-14049193 FN2355 SNP G -> A AC=1;AN=192;BQB=0.139498;DP=4875;DP4=1876,2652,10,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64327e-14;MQSB=0.844161;RPB=0.604915;SGB=-179.663;VDB=0.920898;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.7:14056065 chr07:014056065 0 W/14056065-14056065 FN3557-S SNP G -> A AC=1;AN=188;BQB=0.998884;DP=3484;DP4=1403,2007,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.100172;MQB=0.341186;MQSB=3.31388e-22;RPB=0.43879;SGB=108.042;VDB=0.711946;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D975N|1310|LOC_Os07g24700|protein_coding|CODING|LOC_Os07g24700.1|3|1) FN4040-S.SNP.7:14056065 chr07:014056065 0 W/14056065-14056065 FN4040-S SNP G -> A AC=1;AN=168;BQB=0.993217;DP=3220;DP4=1298,1811,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.113975;MQB=0.158627;MQSB=5.38843e-19;RPB=0.214401;SGB=14.8923;VDB=0.554125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D975N|1310|LOC_Os07g24700|protein_coding|CODING|LOC_Os07g24700.1|3|1) FN471-S.SNP.7:14056065 chr07:014056065 0 W/14056065-14056065 FN471-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g24700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2301.SNP.7:14062266 chr07:014062266 0 W/14062266-14062266 FN2301 SNP C -> A AC=1;AN=192;BQB=0.942129;DP=5853;DP4=3164,2393,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=27;MQ0F=0.187425;MQB=0.184655;MQSB=8.2068e-15;RPB=0.946779;SGB=50.4731;VDB=0.561782;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T248N|460|LOC_Os07g24720|protein_coding|CODING|LOC_Os07g24720.1|2|1) FN574-S.SNP.7:14065339 chr07:014065339 0 W/14065339-14065339 FN574-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g24730 retrotransposon protein, putative, unclassified, expressed SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2450.SNP.7:14072398 chr07:014072398 0 W/14072398-14072398 FN2450 SNP G -> T AC=1;AN=200;BQB=0.00882345;DP=4286;DP4=2065,1980,9,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.54639e-08;MQSB=0.00303857;RPB=0.325897;SGB=72.6852;VDB=0.0883062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.7:14072518 chr07:014072518 0 W/14072518-14072518 FN1376-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g24750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN917-S.SNP.7:14085548 chr07:014085548 0 W/14085548-14085548 FN917-S Single Base Substitution A-G INTRON HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1389-S.SNP.7:14088285 chr07:014088285 0 W/14088285-14088285 FN1389-S Single Base Substitution T-C INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1389-S.SNP.7:14088451 chr07:014088451 0 W/14088451-14088451 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1717-S.SNP.7:14092835 chr07:014092835 0 W/14092835-14092835 FN1717-S SNP T -> C AC=1;AN=188;BQB=0.269182;DP=2261;DP4=973,1247,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17037e-09;MQSB=0.916751;RPB=0.98145;SGB=-60.4458;VDB=0.929497;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A174|523|LOC_Os07g24790|protein_coding|CODING|LOC_Os07g24790.1|2|1) FN4152-S.SNP.7:14097131 chr07:014097131 0 W/14097131-14097131 FN4152-S SNP C -> A AC=1;AN=170;BQB=0.970295;DP=2756;DP4=1358,1290,13,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.90354e-12;MQSB=0.782743;RPB=0.360922;SGB=72.7472;VDB=0.392992;EFF=INTRON(MODIFIER||||600|LOC_Os07g24800|protein_coding|CODING|LOC_Os07g24800.1|1|1) FN_846-8-1.SNP.7:14098255 chr07:014098255 0 W/14098255-14098255 FN_846-8-1 Single Base Substitution G-A HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. W385-6-8-4.SNP.7:14098338 chr07:014098338 0 W/14098338-14098338 W385-6-8-4 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g24800 retrotransposon protein, putative, unclassified, expressed SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3950-S.SNP.7:14099566 chr07:014099566 0 W/14099566-14099566 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.881321;DP=2698;DP4=1399,1221,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30887e-11;MQSB=0.884566;RPB=0.34158;SGB=34.3388;VDB=0.472095;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A568|600|LOC_Os07g24800|protein_coding|CODING|LOC_Os07g24800.1|7|1) FN511-S.SNP.7:14111104 chr07:014111104 0 W/14111104-14111104 FN511-S Single Base Substitution C-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1241-S.SNP.7:14112237 chr07:014112237 0 W/14112237-14112237 FN1241-S Single Base Substitution C-T INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2429.SNP.7:14114317 chr07:014114317 0 W/14114317-14114317 FN2429 SNP A -> G AC=1;AN=200;BQB=0.661183;DP=4833;DP4=2328,2151,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76405e-15;MQSB=0.998806;RPB=0.163502;SGB=55.5366;VDB=0.0396997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.7:14116398 chr07:014116398 0 W/14116398-14116398 FN1401-S Single Base Substitution T-C INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3632-S.SNP.7:14116871 chr07:014116871 0 W/14116871-14116871 FN3632-S SNP T -> A AC=1;AN=190;BQB=0.961848;DP=2800;DP4=1436,1275,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11427e-09;MQSB=0.859572;RPB=0.992325;SGB=58.2031;VDB=0.62439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.7:14121592 chr07:014121592 0 W/14121592-14121592 FN2298 SNP G -> A AC=1;AN=192;BQB=0.450952;DP=3377;DP4=1020,2115,3,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17128e-07;MQSB=0.000546134;RPB=0.539506;SGB=67.4678;VDB=0.67309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.7:14122189 chr07:014122189 0 W/14122189-14122189 FN1535-S Single Base Substitution C-T INTERGENIC Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1392-S.SNP.7:14123900 chr07:014123900 0 W/14123900-14123900 FN1392-S Single Base Substitution G-A INTRON HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN537-S.SNP.7:14130135 chr07:014130135 0 W/14130135-14130135 FN537-S Single Base Substitution T-A INTRON HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN537-S.SNP.7:14130139 chr07:014130139 0 W/14130139-14130139 FN537-S Single Base Substitution T-A INTRON HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN2617-S.SNP.7:14130306 chr07:014130306 0 W/14130306-14130306 FN2617-S SNP G -> A AC=1;AN=186;BQB=0.519586;DP=3653;DP4=2035,1440,12,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000273748;MQB=1.77599e-11;MQSB=0.859324;RPB=0.75605;SGB=58.1246;VDB=0.904602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M38I|659|LOC_Os07g24850|protein_coding|CODING|LOC_Os07g24850.1|2|1) FN-74.SNP.7:14130775 chr07:014130775 0 W/14130775-14130775 FN-74 Single Base Substitution C-A INTRON HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3523-S.SNP.7:14133398 chr07:014133398 0 W/14133398-14133398 FN3523-S SNP G -> A AC=2;AN=188;BQB=0.952113;DP=2643;DP4=1278,1285,8,7;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00113507;MQB=3.83446e-07;MQSB=0.388756;RPB=0.973161;SGB=43.0708;VDB=0.46574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.7:14135240 chr07:014135240 0 W/14135240-14135240 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.0403339;DP=6050;DP4=3076,2687,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.279174;MQB=0.0968876;MQSB=0.0661389;RPB=0.838771;SGB=21.559;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.7:14136333 chr07:014136333 0 W/14136333-14136333 FN2201-S SNP C -> A AC=1;AN=190;BQB=0.979682;DP=4841;DP4=2395,2076,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00227226;MQB=4.25511e-06;MQSB=0.670546;RPB=0.753293;SGB=44.5415;VDB=0.0408454;EFF=INTERGENIC(MODIFIER||||||||||1) FN925-S.SNP.7:14137054 chr07:014137054 0 W/14137054-14137054 FN925-S Single Base Substitution A-G INTERGENIC HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN882-S.SNP.7:14139954 chr07:014139954 0 W/14139954-14139954 FN882-S Single Base Substitution A-G INTERGENIC HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2105-S.SNP.7:14146596 chr07:014146596 0 W/14146596-14146596 FN2105-S SNP A -> G AC=1;AN=168;BQB=0.205792;DP=3464;DP4=1083,2353,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.112875;MQB=0.926252;MQSB=1.56341e-26;RPB=0.857284;SGB=5.62151;VDB=0.830468;EFF=INTERGENIC(MODIFIER||||||||||1) FN-98.SNP.7:14148098 chr07:014148098 0 W/14148098-14148098 FN-98 Single Base Substitution A-C INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN3924-S.SNP.7:14154806 chr07:014154806 0 W/14154806-14154806 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.773428;DP=2427;DP4=1435,891,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00247219;MQB=0.000351917;MQSB=0.000316145;RPB=0.559425;SGB=14.3409;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.7:14160448 chr07:014160448 0 W/14160448-14160448 FN-240 Single Base Substitution C-G INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN554-S.SNP.7:14163576 chr07:014163576 0 W/14163576-14163576 FN554-S Single Base Substitution C-T INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1712-S.SNP.7:14166307 chr07:014166307 0 W/14166307-14166307 FN1712-S SNP T -> C AC=1;AN=188;BQB=0.00522984;DP=3174;DP4=1155,1990,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000103975;MQSB=0.819087;RPB=0.892343;SGB=-13.9132;VDB=0.120203;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.7:14168948 chr07:014168948 0 W/14168948-14168948 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.962882;DP=2247;DP4=1110,1073,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.44743e-10;MQSB=0.697461;RPB=0.0233675;SGB=65.6427;VDB=0.182473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.7:14169554 chr07:014169554 0 W/14169554-14169554 FN3293-S SNP T -> A AC=1;AN=184;BQB=0.923175;DP=2479;DP4=918,1302,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.67736e-06;MQSB=0.910746;RPB=0.372879;SGB=2.23696;VDB=0.0580568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.7:14172978 chr07:014172978 0 W/14172978-14172978 FN1749-S SNP G -> A AC=1;AN=188;BQB=0.983582;DP=3317;DP4=1615,1666,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.911e-07;MQSB=5.39887e-19;RPB=0.416478;SGB=57.244;VDB=0.442848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.7:14176856 chr07:014176856 0 W/14176856-14176856 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.399344;DP=3539;DP4=1472,1982,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000653126;MQSB=0.9606;RPB=0.95546;SGB=28.8977;VDB=0.0404952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.7:14177037 chr07:014177037 0 W/14177037-14177037 FN2251-S SNP G -> A AC=1;AN=190;BQB=0.207107;DP=4358;DP4=2151,1858,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000458926;MQB=0.0486247;MQSB=0.265645;RPB=0.193879;SGB=13.4442;VDB=0.0641965;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.7:14179411 chr07:014179411 0 W/14179411-14179411 FN435-S Single Base Substitution G-A INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1355-S.SNP.7:14182528 chr07:014182528 0 W/14182528-14182528 FN1355-S Single Base Substitution C-A INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1136-19-S.SNP.7:14192400 chr07:014192400 0 W/14192400-14192400 FN1136-19-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN972-S.SNP.7:14194093 chr07:014194093 0 W/14194093-14194093 FN972-S Single Base Substitution C-A INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2639-S.SNP.7:14194798 chr07:014194798 0 W/14194798-14194798 FN2639-S SNP C -> G AC=1;AN=200;BQB=0.840459;DP=4595;DP4=2136,2088,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000217628;MQB=6.76853e-08;MQSB=0.978374;RPB=0.997922;SGB=29.4849;VDB=0.517203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.7:14206830 chr07:014206830 0 W/14206830-14206830 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.890163;DP=4573;DP4=2116,2244,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00043735;MQB=4.49026e-09;MQSB=0.636548;RPB=0.16419;SGB=51.0851;VDB=0.746364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.7:14207923 chr07:014207923 0 W/14207923-14207923 FN3697-S SNP T -> C AC=1;AN=190;BQB=0.780043;DP=2930;DP4=1387,1408,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00204778;MQB=1.84349e-07;MQSB=0.439089;RPB=0.299923;SGB=53.8699;VDB=0.0323839;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.7:14208179 chr07:014208179 0 W/14208179-14208179 FN_N1-169-1 Single Base Substitution G-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN3476-S.SNP.7:14211433 chr07:014211433 0 W/14211433-14211433 FN3476-S SNP C -> A AC=2;AN=184;BQB=0.997567;DP=3035;DP4=1798,1027,26,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.82493e-18;MQSB=0.939181;RPB=0.842085;SGB=83.798;VDB=0.641398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:14214787 chr07:014214787 0 W/14214787-14214787 FN2619-S SNP A -> T AC=1;AN=186;BQB=0.256561;DP=3320;DP4=1229,1695,20,16;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.05725e-15;MQSB=0.450247;RPB=0.267541;SGB=119.242;VDB=0.518048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.7:14215147 chr07:014215147 0 W/14215147-14215147 FN2332 SNP G -> A AC=1;AN=192;BQB=0.88114;DP=4388;DP4=2112,1742,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.24959e-10;MQSB=0.984703;RPB=0.743846;SGB=41.7357;VDB=0.0210921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.7:14217606 chr07:014217606 0 W/14217606-14217606 FN3650-S SNP C -> T AC=2;AN=190;BQB=0.605749;DP=2752;DP4=1428,1192,29,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.6756e-18;MQSB=0.0646246;RPB=0.0775753;SGB=129.282;VDB=0.625942;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.7:14220357 chr07:014220357 0 W/14220357-14220357 FN874-S Single Base Substitution G-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2209-S.SNP.7:14220447 chr07:014220447 0 W/14220447-14220447 FN2209-S SNP T -> C AC=1;AN=190;BQB=0.931609;DP=5560;DP4=2506,2839,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000359712;MQB=5.42746e-06;MQSB=0.957767;RPB=0.871334;SGB=39.9877;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.7:14221243 chr07:014221243 0 W/14221243-14221243 FN499-S Single Base Substitution G-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-275.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN-275 Single Base Substitution C-T INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-291.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN-291 Single Base Substitution C-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1142-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN1142-S Single Base Substitution C-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1751-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN1751-S SNP C -> T AC=2;AN=188;BQB=0.234416;DP=3467;DP4=1993,1419,24,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.15872e-17;MQSB=0.01929;RPB=0.991361;SGB=-46.0419;VDB=0.879756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN3610-S SNP C -> T AC=2;AN=190;BQB=0.995657;DP=2851;DP4=1397,1282,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.20742e-13;MQSB=0.202311;RPB=0.943016;SGB=108.296;VDB=0.92225;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN480-S Single Base Substitution C-T INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN739-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN739-S Single Base Substitution C-T INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.7:14221291 chr07:014221291 0 W/14221291-14221291 FN988-S Single Base Substitution C-T INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-65.SNP.7:14221315 chr07:014221315 0 W/14221315-14221315 FN-65 Single Base Substitution A-T INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3322-S.SNP.7:14222634 chr07:014222634 0 W/14222634-14222634 FN3322-S SNP C -> A AC=2;AN=184;BQB=0.987675;DP=3354;DP4=1781,1467,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.52278e-09;MQSB=0.999537;RPB=0.946164;SGB=60.4004;VDB=0.540888;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.7:14246193 chr07:014246193 0 W/14246193-14246193 FN3385-S SNP C -> T AC=1;AN=184;BQB=0.975471;DP=2689;DP4=1561,952,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.14576e-06;MQSB=0.00103762;RPB=0.377483;SGB=-17.8447;VDB=0.0185018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.7:14247028 chr07:014247028 0 W/14247028-14247028 FN2499 SNP C -> T AC=2;AN=200;BQB=0.9969;DP=2996;DP4=1217,1515,6,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.01937e-09;MQSB=0.362728;RPB=0.691183;SGB=61.9006;VDB=0.298431;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.7:14251511 chr07:014251511 0 W/14251511-14251511 FN884-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN2356.SNP.7:14251586 chr07:014251586 0 W/14251586-14251586 FN2356 SNP A -> T AC=1;AN=192;BQB=0.57377;DP=4751;DP4=2119,2316,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.77785e-13;MQSB=0.999973;RPB=0.823557;SGB=-9.12519;VDB=0.396084;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T299|961|LOC_Os07g25010|protein_coding|CODING|LOC_Os07g25010.1|2|1) FN2602-S.SNP.7:14253601 chr07:014253601 0 W/14253601-14253601 FN2602-S SNP G -> T AC=1;AN=188;BQB=0.999171;DP=4177;DP4=2235,1656,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000239406;MQB=7.95512e-08;MQSB=0.992694;RPB=0.106015;SGB=58.7391;VDB=0.069473;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.7:14255132 chr07:014255132 0 W/14255132-14255132 W23-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2378.SNP.7:14257916 chr07:014257916 0 W/14257916-14257916 FN2378 SNP A -> G AC=1;AN=192;BQB=0.67552;DP=5164;DP4=2477,2344,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.26359e-15;MQSB=0.973155;RPB=0.981406;SGB=67.3792;VDB=0.0773665;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.7:14258216 chr07:014258216 0 W/14258216-14258216 FN-268 Single Base Substitution G-A INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN429-S.SNP.7:14259863 chr07:014259863 0 W/14259863-14259863 FN429-S Single Base Substitution C-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2203-S.SNP.7:14261541 chr07:014261541 0 W/14261541-14261541 FN2203-S SNP C -> A AC=1;AN=190;BQB=0.996808;DP=5066;DP4=2389,2308,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.100671;MQB=0.986525;MQSB=0;RPB=0.142025;SGB=67.3108;VDB=0.237081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3765-S.SNP.7:14263419 chr07:014263419 0 W/14263419-14263419 FN3765-S SNP G -> A AC=2;AN=190;BQB=0.647693;DP=1816;DP4=142,1587,1,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.33045e-07;MQSB=0.258638;RPB=0.873799;SGB=71.8647;VDB=0.319005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.7:14264919 chr07:014264919 0 W/14264919-14264919 FN2484 SNP T -> A AC=1;AN=200;BQB=0.334699;DP=5097;DP4=2282,2460,8,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=5.87706e-07;MQSB=0.453461;RPB=0.0150563;SGB=9.48993;VDB=0.220791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.7:14269828 chr07:014269828 0 W/14269828-14269828 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.313406;DP=2750;DP4=1349,1297,15,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000727273;MQB=1.66779e-09;MQSB=0.637637;RPB=0.858019;SGB=10.3266;VDB=0.541893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V286M|327|LOC_Os07g25030|protein_coding|CODING|LOC_Os07g25030.1|3|1) FN759-S.SNP.7:14270688 chr07:014270688 0 W/14270688-14270688 FN759-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1065-S.SNP.7:14272145 chr07:014272145 0 W/14272145-14272145 FN1065-S Single Base Substitution T-C INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1647-S.SNP.7:14274484 chr07:014274484 0 W/14274484-14274484 FN1647-S Single Base Substitution C-T INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN3451-S.SNP.7:14276504 chr07:014276504 0 W/14276504-14276504 FN3451-S SNP G -> T AC=2;AN=184;BQB=0.983479;DP=3002;DP4=1291,1569,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.24263e-14;MQSB=0.989109;RPB=0.975168;SGB=103.004;VDB=0.150287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.7:14276574 chr07:014276574 0 W/14276574-14276574 FN2411 SNP C -> T AC=1;AN=200;BQB=0.699179;DP=3883;DP4=1481,1895,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38515e-10;MQSB=0.977523;RPB=0.937826;SGB=104.921;VDB=0.881079;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.7:14280949 chr07:014280949 0 W/14280949-14280949 FN-134 Single Base Substitution C-T INTRON HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN1521-S.SNP.7:14281446 chr07:014281446 0 W/14281446-14281446 FN1521-S Single Base Substitution C-A INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3396-S.SNP.7:14286025 chr07:014286025 0 W/14286025-14286025 FN3396-S SNP G -> T AC=1;AN=184;BQB=0.978203;DP=2761;DP4=1364,1286,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40835e-13;MQSB=0.898413;RPB=0.558354;SGB=103.004;VDB=0.00661159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2152-S.SNP.7:14289804 chr07:014289804 0 W/14289804-14289804 FN2152-S SNP G -> A AC=1;AN=168;BQB=0.969617;DP=3591;DP4=1635,1907,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.16327e-08;MQSB=0.969796;RPB=0.917894;SGB=29.4772;VDB=0.136708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.7:14292636 chr07:014292636 0 W/14292636-14292636 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.609963;DP=4956;DP4=2353,2309,8,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000201776;MQB=4.35705e-06;MQSB=0.374736;RPB=0.13728;SGB=68.0801;VDB=0.865484;EFF=INTRON(MODIFIER||||95|LOC_Os07g25050|protein_coding|CODING|LOC_Os07g25050.1|1|1) FN3551-S.SNP.7:14297591 chr07:014297591 0 W/14297591-14297591 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.968414;DP=2684;DP4=1513,1107,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000745156;MQB=8.9401e-06;MQSB=0.985366;RPB=0.519473;SGB=28.8977;VDB=0.323435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.7:14301185 chr07:014301185 0 W/14301185-14301185 FN2085-S SNP C -> A AC=1;AN=168;BQB=0.291207;DP=4162;DP4=2038,2077,10,24;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000480538;MQB=5.96715e-13;MQSB=2.16666e-07;RPB=0.386714;SGB=-46.9043;VDB=0.685706;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.7:14308740 chr07:014308740 0 W/14308740-14308740 W138-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2478.SNP.7:14313151 chr07:014313151 0 W/14313151-14313151 FN2478 SNP C -> T AC=1;AN=200;BQB=0.665408;DP=4238;DP4=2168,1742,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000471921;MQB=1.3693e-12;MQSB=0.541787;RPB=0.988935;SGB=19.1209;VDB=0.125171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1759-S.SNP.7:14314103 chr07:014314103 0 W/14314103-14314103 FN1759-S SNP G -> C AC=1;AN=188;BQB=0.996822;DP=3364;DP4=1946,1374,16,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93925e-13;MQSB=0.359193;RPB=0.768646;SGB=20.9711;VDB=0.553758;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.7:14314566 chr07:014314566 0 W/14314566-14314566 FN-309 Single Base Substitution T-C INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2295.SNP.7:14316196 chr07:014316196 0 W/14316196-14316196 FN2295 SNP C -> T AC=2;AN=192;BQB=0.259568;DP=4550;DP4=1851,2256,30,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.21893e-23;MQSB=0.999733;RPB=0.661521;SGB=182.354;VDB=0.208584;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.7:14316455 chr07:014316455 0 W/14316455-14316455 FN930-S Single Base Substitution A-G INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1128-S.SNP.7:14321260 chr07:014321260 0 W/14321260-14321260 FN1128-S Single Base Substitution G-A INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN2378.SNP.7:14322511 chr07:014322511 0 W/14322511-14322511 FN2378 SNP T -> A AC=1;AN=192;BQB=0.834383;DP=5659;DP4=2341,2922,22,11;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0178477;MQB=6.58354e-08;MQSB=1.54442e-14;RPB=0.586473;SGB=69.9435;VDB=0.632924;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T222|831|LOC_Os07g25080|protein_coding|CODING|LOC_Os07g25080.1|1|1) FN-292.SNP.7:14324281 chr07:014324281 0 W/14324281-14324281 FN-292 Single Base Substitution G-A INTRON HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1222-S.SNP.7:14332266 chr07:014332266 0 W/14332266-14332266 FN1222-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2556-S.SNP.7:14332901 chr07:014332901 0 W/14332901-14332901 FN2556-S SNP T -> C AC=2;AN=186;BQB=0.0630811;DP=3445;DP4=1780,1429,30,20;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0.000580552;MQB=2.86819e-20;MQSB=0.202638;RPB=0.691492;SGB=218.588;VDB=0.754278;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.7:14335964 chr07:014335964 0 W/14335964-14335964 FN672-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g25100 transposon protein, putative, CACTA, En/Spm sub-class SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2577-S.SNP.7:14337013 chr07:014337013 0 W/14337013-14337013 FN2577-S SNP G -> A AC=1;AN=188;BQB=0.990661;DP=3984;DP4=1977,1810,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00125502;MQB=2.66691e-09;MQSB=0.71655;RPB=0.970262;SGB=58.1246;VDB=0.677878;EFF=INTRON(MODIFIER||||667|LOC_Os07g25100|protein_coding|CODING|LOC_Os07g25100.1|3|1) FN-106.SNP.7:14337240 chr07:014337240 0 W/14337240-14337240 FN-106 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25100 transposon protein, putative, CACTA, En/Spm sub-class SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2674-S.SNP.7:14337240 chr07:014337240 0 W/14337240-14337240 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.890432;DP=4723;DP4=2314,2144,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5243e-12;MQSB=0.982989;RPB=0.693421;SGB=95.7111;VDB=0.957161;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A337V|667|LOC_Os07g25100|protein_coding|CODING|LOC_Os07g25100.1|3|1) FN1634-S.SNP.7:14340894 chr07:014340894 0 W/14340894-14340894 FN1634-S Single Base Substitution T-C INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN889-S.SNP.7:14341554 chr07:014341554 0 W/14341554-14341554 FN889-S Single Base Substitution A-T INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN889-S.SNP.7:14341555 chr07:014341555 0 W/14341555-14341555 FN889-S Single Base Substitution C-T INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN1679-S.SNP.7:14347612 chr07:014347612 0 W/14347612-14347612 FN1679-S SNP G -> C AC=2;AN=188;BQB=0.190894;DP=2825;DP4=1184,1585,8,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28878e-17;MQSB=0.63099;RPB=0.459551;SGB=-4.13386;VDB=0.380318;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.7:14348653 chr07:014348653 0 W/14348653-14348653 FN319-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g25120 transposon protein, putative, unclassified, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2221-S.SNP.7:14349810 chr07:014349810 0 W/14349810-14349810 FN2221-S SNP T -> C AC=2;AN=190;BQB=0.744569;DP=4816;DP4=1971,2467,22,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.79051e-30;MQSB=0.912217;RPB=0.852858;SGB=136.03;VDB=0.603601;EFF=INTRON(MODIFIER||||181|LOC_Os07g25120|protein_coding|CODING|LOC_Os07g25120.1|3|1) FN789-S.SNP.7:14356296 chr07:014356296 0 W/14356296-14356296 FN789-S Single Base Substitution C-T INTRON HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN-136.SNP.7:14356576 chr07:014356576 0 W/14356576-14356576 FN-136 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1099-S.SNP.7:14357609 chr07:014357609 0 W/14357609-14357609 FN1099-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2314.SNP.7:14357763 chr07:014357763 0 W/14357763-14357763 FN2314 SNP G -> A AC=1;AN=192;BQB=0.749427;DP=4970;DP4=2478,2196,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000201207;MQB=1.68791e-06;MQSB=0.987729;RPB=0.850615;SGB=32.6514;VDB=0.0684329;EFF=INTRON(MODIFIER||||1127|LOC_Os07g25130|protein_coding|CODING|LOC_Os07g25130.1|5|1) FN-175.SNP.7:14359989 chr07:014359989 0 W/14359989-14359989 FN-175 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1573-S.SNP.7:14360545 chr07:014360545 0 W/14360545-14360545 FN1573-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1573-S.SNP.7:14360547 chr07:014360547 0 W/14360547-14360547 FN1573-S Single Base Substitution C-A STOP_GAINED HET LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1073-S.SNP.7:14360571 chr07:014360571 0 W/14360571-14360571 FN1073-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3665-S.SNP.7:14363749 chr07:014363749 0 W/14363749-14363749 FN3665-S SNP C -> A AC=1;AN=190;BQB=0.842639;DP=2605;DP4=963,1525,5,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85053e-10;MQSB=0.623261;RPB=0.925097;SGB=90.0802;VDB=0.964429;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.7:14377532 chr07:014377532 0 W/14377532-14377532 FN808-S Single Base Substitution C-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3485-S.SNP.7:14378596 chr07:014378596 0 W/14378596-14378596 FN3485-S SNP C -> T AC=1;AN=184;BQB=0.557194;DP=2741;DP4=1442,1206,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.59633e-07;MQSB=0.951252;RPB=0.684957;SGB=66.8296;VDB=0.146644;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P408|412|LOC_Os07g25160|protein_coding|CODING|LOC_Os07g25160.1|4|1) FN1606-S.SNP.7:14381654 chr07:014381654 0 W/14381654-14381654 FN1606-S Single Base Substitution G-A INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3533-S.SNP.7:14381878 chr07:014381878 0 W/14381878-14381878 FN3533-S SNP G -> A AC=2;AN=188;BQB=0.59832;DP=3290;DP4=1593,1592,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.67667e-18;MQSB=0.978374;RPB=0.821965;SGB=171.648;VDB=0.246313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.7:14388284 chr07:014388284 0 W/14388284-14388284 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.558947;DP=3020;DP4=1516,1376,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0201987;MQB=0.973704;MQSB=0.999175;RPB=0.997983;SGB=37.4429;VDB=0.896603;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.7:14389256 chr07:014389256 0 W/14389256-14389256 FN-162 Single Base Substitution G-C INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN_N1-202-3.SNP.7:14391688 chr07:014391688 0 W/14391688-14391688 FN_N1-202-3 Single Base Substitution T-C HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN476-S.SNP.7:14393382 chr07:014393382 0 W/14393382-14393382 FN476-S Single Base Substitution C-T INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2467.SNP.7:14397053 chr07:014397053 0 W/14397053-14397053 FN2467 SNP A -> T AC=1;AN=200;BQB=0.92145;DP=3398;DP4=1992,1071,10,4;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0150088;MQB=0.0338192;MQSB=0.0204805;RPB=0.253701;SGB=58.8698;VDB=0.0275695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.7:14402631 chr07:014402631 0 W/14402631-14402631 FN1533-S Single Base Substitution G-A INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN4108-S.SNP.7:14406271 chr07:014406271 0 W/14406271-14406271 FN4108-S SNP T -> A AC=2;AN=182;BQB=0.993059;DP=3281;DP4=1607,1554,17,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.82323e-18;MQSB=0.967061;RPB=0.918145;SGB=143.35;VDB=0.678636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q520L|1251|LOC_Os07g25210|protein_coding|CODING|LOC_Os07g25210.1|11|1) FN-90.SNP.7:14407751 chr07:014407751 0 W/14407751-14407751 FN-90 Single Base Substitution C-T INTRON HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN4138-S.SNP.7:14419282 chr07:014419282 0 W/14419282-14419282 FN4138-S SNP A -> T AC=1;AN=170;BQB=0.999319;DP=2672;DP4=1164,1417,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.6981e-08;MQSB=0.561339;RPB=0.942058;SGB=14.9986;VDB=0.855219;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.7:14419542 chr07:014419542 0 W/14419542-14419542 FN4150-S SNP G -> T AC=1;AN=170;BQB=0.997669;DP=2457;DP4=1058,1307,11,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.69241e-11;MQSB=0.986704;RPB=0.557926;SGB=58.9766;VDB=0.413797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.7:14426843 chr07:014426843 0 W/14426843-14426843 FN2456 SNP G -> A AC=1;AN=200;BQB=0.626875;DP=4170;DP4=2011,1890,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86496e-07;MQSB=0.677101;RPB=0.990477;SGB=21.6694;VDB=0.549339;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P18S|339|LOC_Os07g25240|protein_coding|CODING|LOC_Os07g25240.1|1|1) FN1531-S.SNP.7:14428935 chr07:014428935 0 W/14428935-14428935 FN1531-S Single Base Substitution A-G INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1069-S.SNP.7:14435583 chr07:014435583 0 W/14435583-14435583 FN1069-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3841-S.SNP.7:14437554 chr07:014437554 0 W/14437554-14437554 FN3841-S SNP G -> C AC=1;AN=190;BQB=0.934344;DP=2781;DP4=1359,1324,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.36005e-09;MQSB=0.999074;RPB=0.64531;SGB=58.2031;VDB=0.695866;EFF=SPLICE_SITE_REGION(LOW||||777|LOC_Os07g25270|protein_coding|CODING|LOC_Os07g25270.1|3|1),INTRON(MODIFIER||||777|LOC_Os07g25270|protein_coding|CODING|LOC_Os07g25270.1|3|1) FN3401-S.SNP.7:14438104 chr07:014438104 0 W/14438104-14438104 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.998553;DP=3519;DP4=1733,1658,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58334e-08;MQSB=0.957403;RPB=0.268459;SGB=42.7914;VDB=0.0631809;EFF=INTRON(MODIFIER||||777|LOC_Os07g25270|protein_coding|CODING|LOC_Os07g25270.1|4|1) FN3900-S.SNP.7:14442437 chr07:014442437 0 W/14442437-14442437 FN3900-S SNP C -> A AC=1;AN=158;BQB=0.965618;DP=2524;DP4=1174,1270,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.67484e-07;MQSB=0.976494;RPB=0.994815;SGB=23.9652;VDB=0.560195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.7:14443266 chr07:014443266 0 W/14443266-14443266 FN3857-S SNP C -> A AC=1;AN=158;BQB=0.833896;DP=2158;DP4=1152,918,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.49258e-06;MQSB=0.986494;RPB=0.480458;SGB=51.4366;VDB=0.126964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S120Y|981|LOC_Os07g25290|protein_coding|CODING|LOC_Os07g25290.1|1|1) FN1736-S.SNP.7:14443278 chr07:014443278 0 W/14443278-14443278 FN1736-S SNP A -> C AC=1;AN=188;BQB=0.947673;DP=2321;DP4=1129,1148,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.36626e-08;MQSB=0.998342;RPB=0.998263;SGB=39.5276;VDB=0.412929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q124P|981|LOC_Os07g25290|protein_coding|CODING|LOC_Os07g25290.1|1|1) FN4130-S.SNP.7:14457573 chr07:014457573 0 W/14457573-14457573 FN4130-S SNP T -> A AC=2;AN=182;BQB=0.480122;DP=2620;DP4=1040,1509,4,10;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000381679;MQB=5.42986e-05;MQSB=0.222814;RPB=0.954469;SGB=57.644;VDB=0.704468;EFF=INTRON(MODIFIER||||351|LOC_Os07g25310|protein_coding|CODING|LOC_Os07g25310.1|2|1) FN1505-S.SNP.7:14457635 chr07:014457635 0 W/14457635-14457635 FN1505-S Single Base Substitution T-C INTRON HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN813-S.SNP.7:14458091 chr07:014458091 0 W/14458091-14458091 FN813-S Single Base Substitution C-T INTRON HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1195-S.SNP.7:14458177 chr07:014458177 0 W/14458177-14458177 FN1195-S Single Base Substitution A-G INTRON HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3366-S.SNP.7:14458593 chr07:014458593 0 W/14458593-14458593 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.997602;DP=2355;DP4=1017,1149,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.73537e-06;MQSB=0.355538;RPB=0.320944;SGB=46.3132;VDB=0.954669;EFF=INTRON(MODIFIER||||351|LOC_Os07g25310|protein_coding|CODING|LOC_Os07g25310.1|1|1) FN900-S.SNP.7:14467536 chr07:014467536 0 W/14467536-14467536 FN900-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g25330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN4229-S.SNP.7:14468076 chr07:014468076 0 W/14468076-14468076 FN4229-S SNP T -> C AC=2;AN=170;BQB=0.64271;DP=2654;DP4=1255,1308,15,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.27575e-13;MQSB=0.991165;RPB=0.94583;SGB=86.5178;VDB=0.995519;EFF=SPLICE_SITE_REGION(LOW||||973|LOC_Os07g25330|protein_coding|CODING|LOC_Os07g25330.1|6|1),INTRON(MODIFIER||||973|LOC_Os07g25330|protein_coding|CODING|LOC_Os07g25330.1|6|1) FN3848-S.SNP.7:14471917 chr07:014471917 0 W/14471917-14471917 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.765518;DP=2671;DP4=1318,1272,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000748783;MQB=2.57702e-08;MQSB=0.860225;RPB=0.623027;SGB=51.4366;VDB=0.362593;EFF=UTR_5_PRIME(MODIFIER||1184||973|LOC_Os07g25330|protein_coding|CODING|LOC_Os07g25330.1|2|1) FN3848-S.SNP.7:14471945 chr07:014471945 0 W/14471945-14471945 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.229704;DP=2717;DP4=1373,1276,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.53398e-09;MQSB=0.886105;RPB=0.993567;SGB=37.4429;VDB=0.871028;EFF=START_GAINED(LOW||||973|LOC_Os07g25330|protein_coding|CODING|LOC_Os07g25330.1|2|1),UTR_5_PRIME(MODIFIER||1212||973|LOC_Os07g25330|protein_coding|CODING|LOC_Os07g25330.1|2|1) FN836-S.SNP.7:14472131 chr07:014472131 0 W/14472131-14472131 FN836-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN774-S.SNP.7:14473048 chr07:014473048 0 W/14473048-14473048 FN774-S Single Base Substitution G-A INTERGENIC HOMO SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. 702-7.SNP.7:14480587 chr07:014480587 0 W/14480587-14480587 702-7 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1448, Mutant_ID: 702-7, Generation: M2, Mutations: 31, Genes: 27, Seed availability: Yes. FN3319-S.SNP.7:14480625 chr07:014480625 0 W/14480625-14480625 FN3319-S SNP G -> A AC=1;AN=184;BQB=0.986405;DP=3022;DP4=1333,1549,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.33277e-07;MQSB=0.946172;RPB=0.884963;SGB=13.188;VDB=0.704051;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.7:14492259 chr07:014492259 0 W/14492259-14492259 FN4107-S SNP A -> T AC=1;AN=182;BQB=0.778289;DP=3227;DP4=1409,1587,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.02719e-07;MQSB=0.995414;RPB=0.544644;SGB=25.0952;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.7:14494831 chr07:014494831 0 W/14494831-14494831 FN229-S Single Base Substitution T-C INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN470-S.SNP.7:14500002 chr07:014500002 0 W/14500002-14500002 FN470-S Single Base Substitution C-T INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1280-S.SNP.7:14509175 chr07:014509175 0 W/14509175-14509175 FN1280-S Single Base Substitution T-C INTRON HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-380.SNP.7:14513428 chr07:014513428 0 W/14513428-14513428 FN-380 Single Base Substitution T-C INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN620-S.SNP.7:14515699 chr07:014515699 0 W/14515699-14515699 FN620-S Single Base Substitution A-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2211-S.SNP.7:14516030 chr07:014516030 0 W/14516030-14516030 FN2211-S SNP T -> C AC=1;AN=190;BQB=0.89435;DP=4923;DP4=2157,2368,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.9939e-11;MQSB=0.934914;RPB=0.699735;SGB=60.9777;VDB=0.106656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.7:14516503 chr07:014516503 0 W/14516503-14516503 FN2338 SNP G -> A AC=1;AN=192;BQB=0.0335702;DP=4965;DP4=2036,2698,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.00019464;MQSB=0.994609;RPB=0.374945;SGB=49.2105;VDB=0.673417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.7:14518689 chr07:014518689 0 W/14518689-14518689 FN1307-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN439-S.SNP.7:14519260 chr07:014519260 0 W/14519260-14519260 FN439-S Single Base Substitution G-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN506-S.SNP.7:14527330 chr07:014527330 0 W/14527330-14527330 FN506-S Single Base Substitution G-T INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN3435-S.SNP.7:14532996 chr07:014532996 0 W/14532996-14532996 FN3435-S SNP C -> T AC=2;AN=184;BQB=0.77273;DP=3031;DP4=1518,1410,18,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.0232e-14;MQSB=0.798355;RPB=0.973869;SGB=95.6183;VDB=0.211636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.7:14554066 chr07:014554066 0 W/14554066-14554066 FN3480-S SNP C -> A AC=1;AN=184;BQB=0.598122;DP=2661;DP4=1170,1334,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.803e-10;MQSB=1.42918e-05;RPB=0.975019;SGB=-66.616;VDB=0.583416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:14573845 chr07:014573845 0 W/14573845-14573845 FN2218-S SNP A -> G AC=1;AN=190;BQB=0.374424;DP=4703;DP4=2062,2052,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53753e-16;MQSB=0.980169;RPB=0.698108;SGB=61.9679;VDB=0.0414691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.7:14578735 chr07:014578735 0 W/14578735-14578735 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.673107;DP=3283;DP4=1803,1413,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0005883;MQSB=0.729681;RPB=0.496278;SGB=35.1773;VDB=0.342281;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G416|656|LOC_Os07g25460|protein_coding|CODING|LOC_Os07g25460.1|2|1) FN3820-S.SNP.7:14593964 chr07:014593964 0 W/14593964-14593964 FN3820-S SNP C -> G AC=1;AN=190;BQB=0.996234;DP=2710;DP4=1415,1213,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.3574e-10;MQSB=0.956286;RPB=0.693296;SGB=62.7569;VDB=0.0776398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.7:14593965 chr07:014593965 0 W/14593965-14593965 FN3820-S SNP G -> C AC=1;AN=190;BQB=0.99047;DP=2702;DP4=1404,1219,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51817e-09;MQSB=0.984558;RPB=0.879401;SGB=46.7622;VDB=0.14926;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.7:14603079 chr07:014603079 0 W/14603079-14603079 FN1718-S SNP C -> T AC=1;AN=188;BQB=0.0897882;DP=3605;DP4=2335,1219,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.41623e-06;MQSB=0.996918;RPB=0.925601;SGB=-61.9025;VDB=0.262812;EFF=INTRON(MODIFIER||||245|LOC_Os07g25490|protein_coding|CODING|LOC_Os07g25490.1|1|1) FN2247-S.SNP.7:14603483 chr07:014603483 0 W/14603483-14603483 FN2247-S SNP A -> T AC=1;AN=190;BQB=0.647837;DP=5536;DP4=2403,2785,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.66123e-08;MQSB=0.838375;RPB=0.339381;SGB=39.6545;VDB=0.248928;EFF=INTRON(MODIFIER||||245|LOC_Os07g25490|protein_coding|CODING|LOC_Os07g25490.1|1|1) FN1025-S.SNP.7:14609487 chr07:014609487 0 W/14609487-14609487 FN1025-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1494-S.SNP.7:14611698 chr07:014611698 0 W/14611698-14611698 FN1494-S Single Base Substitution A-T INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1494-S.SNP.7:14611699 chr07:014611699 0 W/14611699-14611699 FN1494-S Single Base Substitution G-T INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1035-S.SNP.7:14615522 chr07:014615522 0 W/14615522-14615522 FN1035-S Single Base Substitution G-C INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2218-S.SNP.7:14615977 chr07:014615977 0 W/14615977-14615977 FN2218-S SNP A -> C AC=1;AN=190;BQB=0.653112;DP=4692;DP4=2041,2149,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000426257;MQB=3.62986e-11;MQSB=0.69877;RPB=0.960729;SGB=-12.6681;VDB=0.409559;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.7:14622976 chr07:014622976 0 W/14622976-14622976 FN-336 Single Base Substitution T-G INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2141-S.SNP.7:14626561 chr07:014626561 0 W/14626561-14626561 FN2141-S SNP G -> T AC=2;AN=168;BQB=0.695076;DP=2558;DP4=2151,359,24,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.77442e-13;MQSB=0.815551;RPB=0.787988;SGB=-11.0644;VDB=0.531883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.7:14630180 chr07:014630180 0 W/14630180-14630180 FN2286 SNP C -> T AC=1;AN=192;BQB=0.0541549;DP=4587;DP4=2297,2090,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.72768e-09;MQSB=0.976257;RPB=0.960577;SGB=50.4731;VDB=0.118061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.7:14635362 chr07:014635362 0 W/14635362-14635362 FN2321 SNP T -> C AC=1;AN=192;BQB=0.919815;DP=4974;DP4=2412,2242,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.59318e-14;MQSB=0.997489;RPB=0.988422;SGB=113.111;VDB=0.809552;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.7:14637299 chr07:014637299 0 W/14637299-14637299 FN512-S Single Base Substitution G-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1415-S.SNP.7:14638624 chr07:014638624 0 W/14638624-14638624 FN1415-S Single Base Substitution T-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1692-S.SNP.7:14638762 chr07:014638762 0 W/14638762-14638762 FN1692-S SNP G -> A AC=1;AN=188;BQB=0.494109;DP=3750;DP4=1821,1892,17,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8351e-09;MQSB=0.960962;RPB=0.987486;SGB=-10.1101;VDB=0.772133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.7:14645129 chr07:014645129 0 W/14645129-14645129 FN3838-S SNP A -> G AC=2;AN=186;BQB=0.768846;DP=2727;DP4=1375,1270,12,10;HOB=0.0212741;ICB=0.494682;MQ=45;MQ0F=0.000366703;MQB=9.12097e-05;MQSB=0.984967;RPB=0.726554;SGB=68.0854;VDB=0.128086;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D362G|506|LOC_Os07g25550|protein_coding|CODING|LOC_Os07g25550.1|7|1) FN628-S.SNP.7:14654050 chr07:014654050 0 W/14654050-14654050 FN628-S Single Base Substitution T-C INTRON HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN_772-3-1.SNP.7:14655366 chr07:014655366 0 W/14655366-14655366 FN_772-3-1 Single Base Substitution C-T HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN3677-S.SNP.7:14655390 chr07:014655390 0 W/14655390-14655390 FN3677-S SNP T -> A AC=1;AN=190;BQB=0.951606;DP=3008;DP4=1423,1459,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23443e-06;MQSB=0.942934;RPB=0.961079;SGB=35.4339;VDB=0.202829;EFF=INTRON(MODIFIER||||465|LOC_Os07g25560|protein_coding|CODING|LOC_Os07g25560.1|5|1) FN865-S.SNP.7:14659052 chr07:014659052 0 W/14659052-14659052 FN865-S Single Base Substitution G-A INTRON HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1119-S.SNP.7:14662668 chr07:014662668 0 W/14662668-14662668 FN1119-S Single Base Substitution G-A INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN799-S.SNP.7:14673617 chr07:014673617 0 W/14673617-14673617 FN799-S Single Base Substitution A-T INTRON HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN499-S.SNP.7:14677755 chr07:014677755 0 W/14677755-14677755 FN499-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25600 expressed protein SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3310-S.SNP.7:14679127 chr07:014679127 0 W/14679127-14679127 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.992948;DP=2752;DP4=1297,1335,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.2432e-11;MQSB=0.992819;RPB=0.83957;SGB=56.8786;VDB=0.938161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.7:14690442 chr07:014690442 0 W/14690442-14690442 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.975769;DP=5077;DP4=2509,2323,12,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.012015;MQB=0.000423973;MQSB=0.13262;RPB=0.975413;SGB=34.6953;VDB=0.416988;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.7:14690660 chr07:014690660 0 W/14690660-14690660 FN804-S Single Base Substitution C-G INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1104-S.SNP.7:14692465 chr07:014692465 0 W/14692465-14692465 FN1104-S Single Base Substitution C-T INTRON HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2267-S.SNP.7:14692913 chr07:014692913 0 W/14692913-14692913 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.831363;DP=4940;DP4=2356,2261,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0145749;MQB=0.000619922;MQSB=0.24799;RPB=0.828971;SGB=57.4238;VDB=0.222992;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y215|1595|LOC_Os07g25630|protein_coding|CODING|LOC_Os07g25630.1|2|1) FN1355-S.SNP.7:14694096 chr07:014694096 0 W/14694096-14694096 FN1355-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN867-S.SNP.7:14703919 chr07:014703919 0 W/14703919-14703919 FN867-S Single Base Substitution C-A INTRON HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2659-S.SNP.7:14708040 chr07:014708040 0 W/14708040-14708040 FN2659-S SNP C -> T AC=2;AN=200;BQB=0.952549;DP=4802;DP4=2394,2135,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.41726e-26;MQSB=0.999759;RPB=0.773978;SGB=141.214;VDB=0.0412478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G255D|629|LOC_Os07g25650|protein_coding|CODING|LOC_Os07g25650.1|2|1) FN-364.SNP.7:14708065 chr07:014708065 0 W/14708065-14708065 FN-364 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g25650 expressed protein SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3896-S.SNP.7:14731358 chr07:014731358 0 W/14731358-14731358 FN3896-S SNP G -> C AC=1;AN=158;BQB=0.810619;DP=2457;DP4=1121,1272,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.30755e-07;MQSB=0.980292;RPB=0.991196;SGB=21.4493;VDB=0.142842;EFF=UTR_3_PRIME(MODIFIER||105||1219|LOC_Os07g25680|protein_coding|CODING|LOC_Os07g25680.1|9|1) FN1438-S.SNP.7:14735549 chr07:014735549 0 W/14735549-14735549 FN1438-S Single Base Substitution G-A INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN354-S.SNP.7:14742802 chr07:014742802 0 W/14742802-14742802 FN354-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g25700 expressed protein SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN530-S.SNP.7:14742841 chr07:014742841 0 W/14742841-14742841 FN530-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g25700 expressed protein SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3322-S.SNP.7:14746208 chr07:014746208 0 W/14746208-14746208 FN3322-S SNP G -> A AC=1;AN=184;BQB=0.329069;DP=2872;DP4=1593,1185,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81025e-05;MQSB=0.996936;RPB=0.817313;SGB=25.1826;VDB=0.81712;EFF=UTR_3_PRIME(MODIFIER||3130||196|LOC_Os07g25700|protein_coding|CODING|LOC_Os07g25700.1|8|1) FN-126.SNP.7:14753552 chr07:014753552 0 W/14753552-14753552 FN-126 Single Base Substitution G-A INTERGENIC HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1324-S.SNP.7:14755458 chr07:014755458 0 W/14755458-14755458 FN1324-S Single Base Substitution C-T INTRON HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2342.SNP.7:14755625 chr07:014755625 0 W/14755625-14755625 FN2342 SNP G -> C AC=1;AN=192;BQB=0.594292;DP=5111;DP4=2474,2332,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.37453e-17;MQSB=0.995505;RPB=0.72091;SGB=57.1218;VDB=0.803467;EFF=INTRON(MODIFIER||||426|LOC_Os07g25710|protein_coding|CODING|LOC_Os07g25710.1|2|1),INTRON(MODIFIER||||426|LOC_Os07g25710|protein_coding|CODING|LOC_Os07g25710.2|2|1),INTRON(MODIFIER||||426|LOC_Os07g25710|protein_coding|CODING|LOC_Os07g25710.3|2|1),INTRON(MODIFIER||||361|LOC_Os07g25710|protein_coding|CODING|LOC_Os07g25710.4|2|1) FN3362-S.SNP.7:14761216 chr07:014761216 0 W/14761216-14761216 FN3362-S SNP C -> T AC=2;AN=184;BQB=0.957529;DP=3011;DP4=1569,1304,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.98342e-17;MQSB=0.895055;RPB=0.948431;SGB=99.14;VDB=0.0135455;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.7:14768018 chr07:014768018 0 W/14768018-14768018 FN1633-S Single Base Substitution C-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN4187-S.SNP.7:14780537 chr07:014780537 0 W/14780537-14780537 FN4187-S SNP C -> T AC=1;AN=170;BQB=0.736539;DP=2273;DP4=1189,1009,2,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.20574e-05;MQSB=0.983712;RPB=0.78584;SGB=47.8722;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.7:14781917 chr07:014781917 0 W/14781917-14781917 FN-87 Single Base Substitution G-T INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2677-S.SNP.7:14785712 chr07:014785712 0 W/14785712-14785712 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.934455;DP=4892;DP4=2513,2065,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18531e-14;MQSB=0.970829;RPB=0.996024;SGB=79.9264;VDB=0.326775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.7:14787007 chr07:014787007 0 W/14787007-14787007 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.989333;DP=2611;DP4=1088,1370,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00076599;MQB=6.76067e-05;MQSB=0.977614;RPB=0.136104;SGB=44.5415;VDB=0.239887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.7:14787363 chr07:014787363 0 W/14787363-14787363 FN2742-S SNP G -> C AC=1;AN=200;BQB=0.768111;DP=4938;DP4=2489,2170,20,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.52024e-16;MQSB=0.234935;RPB=0.9843;SGB=-2.82234;VDB=0.908578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1293-S.SNP.7:14787929 chr07:014787929 0 W/14787929-14787929 FN1293-S Single Base Substitution C-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN4175-S.SNP.7:14794317 chr07:014794317 0 W/14794317-14794317 FN4175-S SNP C -> G AC=2;AN=170;BQB=0.843731;DP=2576;DP4=1297,1197,10,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.76114e-14;MQSB=0.866806;RPB=0.984159;SGB=96.7413;VDB=0.219968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.7:14800895 chr07:014800895 0 W/14800895-14800895 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.433596;DP=4434;DP4=2323,1815,22,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.15024e-21;MQSB=0.0751866;RPB=0.379398;SGB=-1.93338;VDB=0.230671;EFF=INTRON(MODIFIER||||796|LOC_Os07g25760|protein_coding|CODING|LOC_Os07g25760.1|5|1) FN4129-S.SNP.7:14805768 chr07:014805768 0 W/14805768-14805768 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.999623;DP=3012;DP4=1471,1456,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.44282e-09;MQSB=0.703451;RPB=0.69347;SGB=71.1765;VDB=0.476402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.7:14808919 chr07:014808919 0 W/14808919-14808919 FN2711-S SNP C -> G AC=1;AN=200;BQB=0.302561;DP=4944;DP4=2417,2233,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74432e-07;MQSB=0.464779;RPB=0.988383;SGB=36.6644;VDB=0.515483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A16G|106|LOC_Os07g25770|protein_coding|CODING|LOC_Os07g25770.1|1|1) FN2711-S.SNP.7:14808921 chr07:014808921 0 W/14808921-14808921 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.00260234;DP=4954;DP4=2409,2288,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.26972e-07;MQSB=0.471927;RPB=0.924192;SGB=68.0801;VDB=0.239887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E17K|106|LOC_Os07g25770|protein_coding|CODING|LOC_Os07g25770.1|1|1) FN1531-S.SNP.7:14810792 chr07:014810792 0 W/14810792-14810792 FN1531-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os07g25780 expressed protein SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN-144.SNP.7:14811037 chr07:014811037 0 W/14811037-14811037 FN-144 Single Base Substitution T-C INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2293.SNP.7:14811772 chr07:014811772 0 W/14811772-14811772 FN2293 SNP A -> G AC=2;AN=192;BQB=0.935037;DP=3762;DP4=1323,2219,6,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000265816;MQB=5.02375e-12;MQSB=0.986863;RPB=0.983037;SGB=41.7357;VDB=0.767266;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.7:14811812 chr07:014811812 0 W/14811812-14811812 FN695-S Single Base Substitution A-T INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1012-S.SNP.7:14816199 chr07:014816199 0 W/14816199-14816199 FN1012-S Single Base Substitution T-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN_N1-169-1.SNP.7:14819545 chr07:014819545 0 W/14819545-14819545 FN_N1-169-1 Single Base Substitution C-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN424-S.SNP.7:14823477 chr07:014823477 0 W/14823477-14823477 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1073-S.SNP.7:14830531 chr07:014830531 0 W/14830531-14830531 FN1073-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g25830 expressed protein SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN489-S.SNP.7:14830733 chr07:014830733 0 W/14830733-14830733 FN489-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os07g25830 expressed protein SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN3694-S.SNP.7:14835278 chr07:014835278 0 W/14835278-14835278 FN3694-S SNP A -> G AC=1;AN=190;BQB=0.298369;DP=2720;DP4=1112,1487,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.24618e-05;MQSB=0.999987;RPB=0.982376;SGB=18.552;VDB=0.56783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.7:14838424 chr07:014838424 0 W/14838424-14838424 FN3295-S SNP G -> A AC=2;AN=184;BQB=0.807588;DP=4385;DP4=2289,1993,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.05825e-16;MQSB=0.754701;RPB=0.693846;SGB=102.662;VDB=0.214905;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L593|1013|LOC_Os07g25840|protein_coding|CODING|LOC_Os07g25840.1|3|1) FN-196.SNP.7:14839163 chr07:014839163 0 W/14839163-14839163 FN-196 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3849-S.SNP.7:14853861 chr07:014853861 0 W/14853861-14853861 FN3849-S SNP T -> G AC=1;AN=158;BQB=0.856358;DP=2724;DP4=1297,1304,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.4961e-09;MQSB=0.856109;RPB=0.862374;SGB=4.82504;VDB=0.381344;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.7:14855079 chr07:014855079 0 W/14855079-14855079 FN-301 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g25860 retrotransposon, putative, centromere-specific, expressed SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2149-S.SNP.7:14855544 chr07:014855544 0 W/14855544-14855544 FN2149-S SNP C -> G AC=1;AN=168;BQB=0.0458445;DP=3184;DP4=1581,1570,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.3616e-07;MQSB=0.991822;RPB=0.738046;SGB=-66.4989;VDB=0.34644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A238G|548|LOC_Os07g25860|protein_coding|CODING|LOC_Os07g25860.1|2|1) FN3385-S.SNP.7:14859514 chr07:014859514 0 W/14859514-14859514 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.605274;DP=3129;DP4=1376,1630,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000319591;MQB=5.73489e-05;MQSB=0.725178;RPB=0.860299;SGB=8.14452;VDB=0.993834;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.7:14861265 chr07:014861265 0 W/14861265-14861265 FN3677-S SNP C -> A AC=1;AN=190;BQB=0.95236;DP=2726;DP4=1252,1372,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00592e-06;MQSB=0.922176;RPB=0.184175;SGB=39.9877;VDB=0.262342;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.7:14861586 chr07:014861586 0 W/14861586-14861586 FN2161-S SNP C -> T AC=2;AN=168;BQB=0.305746;DP=3043;DP4=1345,1643,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.53981e-10;MQSB=0.965934;RPB=0.993596;SGB=-12.7876;VDB=0.1406;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.7:14861827 chr07:014861827 0 W/14861827-14861827 FN419-S Single Base Substitution C-T INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2753-S.SNP.7:14862611 chr07:014862611 0 W/14862611-14862611 FN2753-S SNP C -> T AC=2;AN=200;BQB=0.876374;DP=4676;DP4=2373,2020,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.92164e-24;MQSB=0.860235;RPB=0.995417;SGB=92.009;VDB=0.0226552;EFF=INTRON(MODIFIER||||51|LOC_Os07g25880|protein_coding|CODING|LOC_Os07g25880.1|1|1) FN990-S.SNP.7:14864100 chr07:014864100 0 W/14864100-14864100 FN990-S Single Base Substitution A-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN990-S.SNP.7:14864423 chr07:014864423 0 W/14864423-14864423 FN990-S Single Base Substitution T-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2355.SNP.7:14883531 chr07:014883531 0 W/14883531-14883531 FN2355 SNP A -> T AC=1;AN=192;BQB=0.700602;DP=4824;DP4=1988,2490,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2245e-10;MQSB=0.977295;RPB=0.169766;SGB=-11.9469;VDB=0.0097033;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.7:14883648 chr07:014883648 0 W/14883648-14883648 FN-212 Single Base Substitution C-T INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2398.SNP.7:14891350 chr07:014891350 0 W/14891350-14891350 FN2398 SNP T -> A AC=1;AN=200;BQB=0.97178;DP=4634;DP4=2221,2096,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.24422e-08;MQSB=0.950411;RPB=0.988555;SGB=49.6594;VDB=0.43896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L161H|539|LOC_Os07g25950|protein_coding|CODING|LOC_Os07g25950.1|1|1) FN1073-S.SNP.7:14891838 chr07:014891838 0 W/14891838-14891838 FN1073-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g25950 retrotransposon protein, putative, unclassified, expressed SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3323-S.SNP.7:14896781 chr07:014896781 0 W/14896781-14896781 FN3323-S SNP G -> A AC=1;AN=184;BQB=0.940124;DP=3305;DP4=1666,1538,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.08139e-05;MQSB=0.85511;RPB=0.947838;SGB=26.1347;VDB=0.0168868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.7:14897830 chr07:014897830 0 W/14897830-14897830 FN2426 SNP G -> A AC=1;AN=200;BQB=0.0131123;DP=4410;DP4=1973,2204,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.94915e-11;MQSB=0.610087;RPB=0.729149;SGB=-11.2947;VDB=0.565017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.7:14898546 chr07:014898546 0 W/14898546-14898546 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.923106;DP=4206;DP4=2009,1887,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63854e-13;MQSB=0.967059;RPB=0.98548;SGB=-9.07482;VDB=0.348601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.7:14898580 chr07:014898580 0 W/14898580-14898580 FN3378-S SNP T -> C AC=2;AN=184;BQB=0.889458;DP=2800;DP4=1449,1223,18,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.69082e-20;MQSB=0.994355;RPB=0.891169;SGB=102.662;VDB=0.300522;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.7:14901129 chr07:014901129 0 W/14901129-14901129 FN786-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3419-S.SNP.7:14902137 chr07:014902137 0 W/14902137-14902137 FN3419-S SNP T -> A AC=2;AN=184;BQB=0.922806;DP=3026;DP4=1236,1672,17,18;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00528751;MQB=2.20041e-16;MQSB=0.779729;RPB=0.28424;SGB=73.7109;VDB=0.432159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L10I|142|LOC_Os07g25970|protein_coding|CODING|LOC_Os07g25970.1|1|1) FN1257-S.SNP.7:14903945 chr07:014903945 0 W/14903945-14903945 FN1257-S Single Base Substitution G-A INTRON HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1086-S.SNP.7:14910713 chr07:014910713 0 W/14910713-14910713 FN1086-S Single Base Substitution A-C INTRON HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2220-S.SNP.7:14917859 chr07:014917859 0 W/14917859-14917859 FN2220-S SNP A -> G AC=2;AN=190;BQB=0.24865;DP=4847;DP4=2163,2236,37,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000412626;MQB=3.52164e-31;MQSB=0.00272145;RPB=0.965083;SGB=151.354;VDB=0.378402;EFF=INTRON(MODIFIER||||496|LOC_Os07g26000|protein_coding|CODING|LOC_Os07g26000.1|1|1) FN-95.SNP.7:14919590 chr07:014919590 0 W/14919590-14919590 FN-95 Single Base Substitution A-G INTRON HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-356.SNP.7:14927239 chr07:014927239 0 W/14927239-14927239 FN-356 Single Base Substitution T-A INTRON HOMO SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2147-S.SNP.7:14928424 chr07:014928424 0 W/14928424-14928424 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.676592;DP=2398;DP4=1263,1067,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.88572e-06;MQSB=0.798198;RPB=0.836484;SGB=-2.96336;VDB=0.384474;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A37|512|LOC_Os07g26020|protein_coding|CODING|LOC_Os07g26020.1|3|1) FN2327.SNP.7:14930732 chr07:014930732 0 W/14930732-14930732 FN2327 SNP G -> A AC=1;AN=192;BQB=0.851045;DP=4604;DP4=2204,2197,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=7.02823e-08;MQSB=0.645965;RPB=0.625096;SGB=103.983;VDB=0.040727;EFF=INTRON(MODIFIER||||512|LOC_Os07g26020|protein_coding|CODING|LOC_Os07g26020.1|7|1) FN1270-S.SNP.7:14930976 chr07:014930976 0 W/14930976-14930976 FN1270-S Single Base Substitution C-A INTRON HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3505-S.SNP.7:14937738 chr07:014937738 0 W/14937738-14937738 FN3505-S SNP G -> A AC=2;AN=188;BQB=0.408862;DP=4132;DP4=2211,1827,21,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.91015e-15;MQSB=0.946008;RPB=0.363155;SGB=106.85;VDB=0.270108;EFF=INTRON(MODIFIER||||538|LOC_Os07g26040|protein_coding|CODING|LOC_Os07g26040.1|2|1) FN2559-S.SNP.7:14938484 chr07:014938484 0 W/14938484-14938484 FN2559-S SNP G -> A AC=2;AN=198;BQB=0.999503;DP=3795;DP4=1796,1751,5,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.24768e-09;MQSB=0.928654;RPB=0.986456;SGB=67.9293;VDB=0.773282;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S121L|538|LOC_Os07g26040|protein_coding|CODING|LOC_Os07g26040.1|2|1) FN-402.SNP.7:14939612 chr07:014939612 0 W/14939612-14939612 FN-402 Single Base Substitution G-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN-212.SNP.7:14941621 chr07:014941621 0 W/14941621-14941621 FN-212 Single Base Substitution G-A INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3757-S.SNP.7:14946625 chr07:014946625 0 W/14946625-14946625 FN3757-S SNP T -> C AC=1;AN=190;BQB=0.669745;DP=2348;DP4=1089,1146,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000120714;MQSB=0.995017;RPB=0.825763;SGB=15.9981;VDB=0.72942;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.7:14950484 chr07:014950484 0 W/14950484-14950484 FN509-S Single Base Substitution C-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN956-S.SNP.7:14951439 chr07:014951439 0 W/14951439-14951439 FN956-S Single Base Substitution A-G INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1473-S.SNP.7:14954331 chr07:014954331 0 W/14954331-14954331 FN1473-S Single Base Substitution A-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2171-S.SNP.7:14958608 chr07:014958608 0 W/14958608-14958608 FN2171-S SNP C -> T AC=2;AN=168;BQB=0.272016;DP=3844;DP4=1618,2179,11,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44919e-15;MQSB=0.963669;RPB=0.984428;SGB=58.647;VDB=0.195458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:14958757 chr07:014958757 0 W/14958757-14958757 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.99036;DP=4362;DP4=1990,2142,17,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.15414e-21;MQSB=0.84449;RPB=0.122273;SGB=81.2467;VDB=0.254101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.7:14960388 chr07:014960388 0 W/14960388-14960388 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.797434;DP=5351;DP4=2370,2602,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000186881;MQB=3.85159e-09;MQSB=6.33603e-05;RPB=0.298455;SGB=89.4087;VDB=0.939558;EFF=INTRON(MODIFIER||||693|LOC_Os07g26070|protein_coding|CODING|LOC_Os07g26070.1|10|1) FN2308.SNP.7:14966039 chr07:014966039 0 W/14966039-14966039 FN2308 SNP C -> T AC=1;AN=192;BQB=0.999608;DP=4688;DP4=2250,2180,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00746587;MQB=1.52214e-06;MQSB=0.305348;RPB=0.842799;SGB=34.0426;VDB=0.443482;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.7:14967868 chr07:014967868 0 W/14967868-14967868 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.929138;DP=4281;DP4=1940,2074,11,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00116795;MQB=1.94284e-08;MQSB=0.00179255;RPB=0.99686;SGB=109.527;VDB=0.148487;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.7:14971800 chr07:014971800 0 W/14971800-14971800 FN-293 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g26090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN3785-S.SNP.7:14976901 chr07:014976901 0 W/14976901-14976901 FN3785-S SNP C -> T AC=2;AN=190;BQB=0.794319;DP=2866;DP4=1372,1396,10,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.34274e-08;MQSB=0.293678;RPB=0.991608;SGB=75.1932;VDB=0.426881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.7:14978865 chr07:014978865 0 W/14978865-14978865 FN2340 SNP G -> A AC=1;AN=192;BQB=0.952931;DP=4515;DP4=2368,1924,11,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.1895e-08;MQSB=0.997587;RPB=0.114635;SGB=5.79046;VDB=0.0574661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.7:14981593 chr07:014981593 0 W/14981593-14981593 FN2095-S SNP G -> A AC=1;AN=168;BQB=0.853556;DP=3429;DP4=1639,1743,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00029163;MQB=3.23639e-07;MQSB=0.982911;RPB=0.778352;SGB=-15.3725;VDB=0.253938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.7:14982401 chr07:014982401 0 W/14982401-14982401 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.918449;DP=5093;DP4=2431,2442,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00259e-09;MQSB=0.999626;RPB=0.265981;SGB=47.4799;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.7:14992114 chr07:014992114 0 W/14992114-14992114 FN2424 SNP T -> A AC=1;AN=200;BQB=0.993798;DP=4394;DP4=2203,1904,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000227583;MQB=4.66084e-13;MQSB=0.275886;RPB=0.97607;SGB=55.5366;VDB=0.956775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.7:14994510 chr07:014994510 0 W/14994510-14994510 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.998688;DP=5115;DP4=2326,2519,12,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0232649;MQB=0.00553272;MQSB=2.60641e-32;RPB=0.940519;SGB=118.737;VDB=0.864909;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.7:14995053 chr07:014995053 0 W/14995053-14995053 FN2243-S SNP T -> A AC=1;AN=190;BQB=0.812195;DP=4851;DP4=2182,2347,10,18;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.046176;MQB=0.991072;MQSB=2.09942e-25;RPB=0.989143;SGB=56.8601;VDB=0.230981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.7:15022755 chr07:015022755 0 W/15022755-15022755 FN3442-S SNP C -> T AC=1;AN=184;BQB=0.937621;DP=3810;DP4=1985,1728,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00314961;MQB=0.00150012;MQSB=0.0565017;RPB=0.87514;SGB=71.3514;VDB=0.141775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.7:15023687 chr07:015023687 0 W/15023687-15023687 FN2538-S SNP A -> G AC=1;AN=198;BQB=0.928897;DP=3864;DP4=1787,1798,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00517598;MQB=0.00204373;MQSB=1.00357e-09;RPB=0.413771;SGB=29.3637;VDB=0.154969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.7:15025662 chr07:015025662 0 W/15025662-15025662 FN3817-S SNP G -> T AC=1;AN=190;BQB=0.830264;DP=2529;DP4=1095,1263,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00012874;MQSB=0.32057;RPB=0.178903;SGB=28.9929;VDB=0.15118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.7:15028869 chr07:015028869 0 W/15028869-15028869 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.489423;DP=4692;DP4=2273,2103,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92101e-13;MQSB=0.94475;RPB=0.946017;SGB=20.7261;VDB=0.616062;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.7:15031488 chr07:015031488 0 W/15031488-15031488 FN-103 Single Base Substitution T-G INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2782-S.SNP.7:15035128 chr07:015035128 0 W/15035128-15035128 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.989971;DP=4515;DP4=2041,2096,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.95297e-09;MQSB=0.21445;RPB=0.875087;SGB=4.56404;VDB=0.0948852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.7:15041837 chr07:015041837 0 W/15041837-15041837 FN3434-S SNP C -> T AC=1;AN=184;BQB=0.947377;DP=2692;DP4=889,1725,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.2308e-08;MQSB=0.355111;RPB=0.578983;SGB=53.2642;VDB=0.665058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.7:15042155 chr07:015042155 0 W/15042155-15042155 FN2399 SNP C -> T AC=1;AN=200;BQB=0.00785839;DP=2805;DP4=1052,1525,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.87147e-07;MQSB=0.248185;RPB=0.980759;SGB=47.4799;VDB=0.870806;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.7:15042926 chr07:015042926 0 W/15042926-15042926 FN4204-S SNP T -> G AC=2;AN=170;BQB=0.690266;DP=1810;DP4=464,1287,2,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.53748e-11;MQSB=0.972364;RPB=0.559582;SGB=96.7413;VDB=0.0160653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.7:15049283 chr07:015049283 0 W/15049283-15049283 FN2483 SNP C -> T AC=1;AN=200;BQB=0.746722;DP=4485;DP4=2201,2054,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44596e-05;MQSB=0.953676;RPB=0.891941;SGB=11.2488;VDB=0.793292;EFF=INTRON(MODIFIER||||149|LOC_Os07g26170|protein_coding|CODING|LOC_Os07g26170.1|1|1) FN1731-S.SNP.7:15051753 chr07:015051753 0 W/15051753-15051753 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.372689;DP=2440;DP4=1136,1276,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87415e-07;MQSB=0.997838;RPB=0.190128;SGB=-61.9025;VDB=0.959949;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.7:15058209 chr07:015058209 0 W/15058209-15058209 W464-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-146.SNP.7:15058813 chr07:015058813 0 W/15058813-15058813 FN-146 Single Base Substitution C-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2684-S.SNP.7:15064457 chr07:015064457 0 W/15064457-15064457 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.454185;DP=4896;DP4=2307,2296,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.46817e-14;MQSB=0.0696768;RPB=0.546269;SGB=94.3471;VDB=0.809938;EFF=INTERGENIC(MODIFIER||||||||||1) FN-171.SNP.7:15066633 chr07:015066633 0 W/15066633-15066633 FN-171 Single Base Substitution T-G INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN-201.SNP.7:15068174 chr07:015068174 0 W/15068174-15068174 FN-201 Single Base Substitution T-G INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2535-S.SNP.7:15068589 chr07:015068589 0 W/15068589-15068589 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.832368;DP=3931;DP4=1789,1910,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=6.33214e-07;MQSB=0.0797361;RPB=0.630509;SGB=86.3098;VDB=0.716499;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.7:15068769 chr07:015068769 0 W/15068769-15068769 FN-94 Single Base Substitution G-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1675-S.SNP.7:15078794 chr07:015078794 0 W/15078794-15078794 FN1675-S SNP T -> A AC=1;AN=188;BQB=0.0250904;DP=3549;DP4=2181,1333,18,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.86195e-11;MQSB=0.775234;RPB=0.702912;SGB=-40.5615;VDB=0.248669;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.7:15079018 chr07:015079018 0 W/15079018-15079018 FN2441 SNP G -> A AC=1;AN=200;BQB=0.541586;DP=4961;DP4=2366,2391,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00181415;MQB=4.83579e-13;MQSB=0.157396;RPB=0.902599;SGB=95.7111;VDB=0.986529;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.7:15080699 chr07:015080699 0 W/15080699-15080699 FN4075-S SNP A -> C AC=1;AN=182;BQB=0.989977;DP=3283;DP4=1614,1523,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000609199;MQB=8.2464e-09;MQSB=0.983211;RPB=0.675145;SGB=49.6712;VDB=0.629315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.7:15083449 chr07:015083449 0 W/15083449-15083449 FN3934-S SNP C -> A AC=1;AN=158;BQB=0.916039;DP=2446;DP4=1189,1092,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000408831;MQB=0.000600196;MQSB=0.0319709;RPB=0.622699;SGB=47.0672;VDB=0.912373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.7:15089196 chr07:015089196 0 W/15089196-15089196 FN2470 SNP G -> A AC=1;AN=200;BQB=0.515947;DP=4931;DP4=2252,2414,19,6;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0131819;MQB=0.000301093;MQSB=0.013776;RPB=0.865669;SGB=50.3263;VDB=0.533218;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S46L|1316|LOC_Os07g26220|protein_coding|CODING|LOC_Os07g26220.1|1|1) FN3852-S.SNP.7:15091602 chr07:015091602 0 W/15091602-15091602 FN3852-S SNP A -> T AC=1;AN=158;BQB=0.964521;DP=2481;DP4=1200,1190,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0552197;MQB=0.122662;MQSB=0.162886;RPB=0.994936;SGB=33.9591;VDB=0.527088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.7:15091603 chr07:015091603 0 W/15091603-15091603 FN3852-S SNP C -> A AC=1;AN=158;BQB=0.9383;DP=2478;DP4=1214,1190,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0569007;MQB=0.191684;MQSB=0.103664;RPB=0.952933;SGB=23.9652;VDB=0.675225;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.7:15093790 chr07:015093790 0 W/15093790-15093790 FN4179-S SNP C -> T AC=1;AN=170;BQB=0.875924;DP=1960;DP4=697,1136,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00357143;MQB=4.32477e-06;MQSB=2.08403e-05;RPB=0.970013;SGB=48.6486;VDB=0.196638;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.7:15094645 chr07:015094645 0 W/15094645-15094645 W278-3-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-73.SNP.7:15101499 chr07:015101499 0 W/15101499-15101499 FN-73 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g26260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1028-S.SNP.7:15102421 chr07:015102421 0 W/15102421-15102421 FN1028-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN739-S.SNP.7:15102752 chr07:015102752 0 W/15102752-15102752 FN739-S Single Base Substitution G-A INTRON HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3306-S.SNP.7:15105292 chr07:015105292 0 W/15105292-15105292 FN3306-S SNP A -> G AC=1;AN=184;BQB=0.847684;DP=5769;DP4=2755,2857,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00277344;MQB=0.00215936;MQSB=4.81085e-08;RPB=0.937983;SGB=32.2261;VDB=0.235908;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.7:15105445 chr07:015105445 0 W/15105445-15105445 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.645441;DP=9438;DP4=4404,4413,15,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0121848;MQB=0.362454;MQSB=0.115074;RPB=0.877923;SGB=-7.6637;VDB=0.867521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.7:15109261 chr07:015109261 0 W/15109261-15109261 FN3517-S SNP T -> C AC=1;AN=188;BQB=0.853993;DP=5508;DP4=2864,2461,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000544662;MQB=7.28983e-12;MQSB=0.45585;RPB=0.434841;SGB=85.3253;VDB=0.51179;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F207S|313|LOC_Os07g26280|protein_coding|CODING|LOC_Os07g26280.1|4|1) FN2214-S.SNP.7:15110741 chr07:015110741 0 W/15110741-15110741 FN2214-S SNP G -> T AC=1;AN=190;BQB=0.700912;DP=6004;DP4=2670,2519,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.004497;MQB=1.05979e-07;MQSB=0.362622;RPB=0.977383;SGB=112.85;VDB=0.408127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.7:15112563 chr07:015112563 0 W/15112563-15112563 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.964932;DP=5529;DP4=2650,2727,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000180865;MQB=1.38709e-08;MQSB=0.900483;RPB=0.352871;SGB=58.2031;VDB=0.523781;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.7:15113017 chr07:015113017 0 W/15113017-15113017 FN-103 Single Base Substitution A-G INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN545-S.SNP.7:15119441 chr07:015119441 0 W/15119441-15119441 FN545-S Single Base Substitution T-C INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN545-S.SNP.7:15119443 chr07:015119443 0 W/15119443-15119443 FN545-S Single Base Substitution A-C INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1493-S.SNP.7:15120992 chr07:015120992 0 W/15120992-15120992 FN1493-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN542-S.SNP.7:15136664 chr07:015136664 0 W/15136664-15136664 FN542-S Single Base Substitution T-C INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN789-S.SNP.7:15139162 chr07:015139162 0 W/15139162-15139162 FN789-S Single Base Substitution C-T INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN497-S.SNP.7:15142861 chr07:015142861 0 W/15142861-15142861 FN497-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3844-S.SNP.7:15143401 chr07:015143401 0 W/15143401-15143401 FN3844-S SNP A -> T AC=1;AN=190;BQB=0.995712;DP=5133;DP4=3017,1931,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64265e-09;MQSB=0.233818;RPB=0.961604;SGB=50.3161;VDB=0.183038;EFF=INTRON(MODIFIER||||810|LOC_Os07g26350|protein_coding|CODING|LOC_Os07g26350.1|2|1) FN448-S.SNP.7:15144770 chr07:015144770 0 W/15144770-15144770 FN448-S Single Base Substitution G-A STOP_GAINED HET LOC_Os07g26350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3831-S.SNP.7:15146628 chr07:015146628 0 W/15146628-15146628 FN3831-S SNP G -> C AC=1;AN=190;BQB=0.943842;DP=5942;DP4=3072,2711,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39915e-11;MQSB=0.986417;RPB=0.357171;SGB=76.4186;VDB=0.362884;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L583F|810|LOC_Os07g26350|protein_coding|CODING|LOC_Os07g26350.1|8|1) FN712-S.SNP.7:15151600 chr07:015151600 0 W/15151600-15151600 FN712-S Single Base Substitution G-A INTRON HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN-248.SNP.7:15151937 chr07:015151937 0 W/15151937-15151937 FN-248 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g26360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2312.SNP.7:15152568 chr07:015152568 0 W/15152568-15152568 FN2312 SNP C -> T AC=2;AN=192;BQB=0.431502;DP=4559;DP4=1912,2206,19,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.56143e-22;MQSB=0.789956;RPB=0.603334;SGB=139.582;VDB=0.0831961;EFF=INTRON(MODIFIER||||852|LOC_Os07g26360|protein_coding|CODING|LOC_Os07g26360.1|1|1) FN698-S.SNP.7:15155013 chr07:015155013 0 W/15155013-15155013 FN698-S Single Base Substitution C-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1650-S.SNP.7:15155308 chr07:015155308 0 W/15155308-15155308 FN1650-S Single Base Substitution G-A INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2608-S.SNP.7:15155478 chr07:015155478 0 W/15155478-15155478 FN2608-S SNP T -> G AC=1;AN=198;BQB=0.264287;DP=4109;DP4=1850,2028,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00170358;MQB=3.30296e-05;MQSB=0.514078;RPB=0.152737;SGB=40.3588;VDB=0.0390947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.7:15160148 chr07:015160148 0 W/15160148-15160148 FN2184-S SNP C -> G AC=2;AN=190;BQB=0.635768;DP=3735;DP4=1316,2117,16,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000535475;MQB=1.47458e-12;MQSB=2.24344e-11;RPB=0.735388;SGB=-7.68321;VDB=0.550853;EFF=INTRON(MODIFIER||||159|LOC_Os07g26380|protein_coding|CODING|LOC_Os07g26380.1|1|1) FN2268-S.SNP.7:15164580 chr07:015164580 0 W/15164580-15164580 FN2268-S SNP A -> T AC=1;AN=190;BQB=0.058038;DP=9092;DP4=3762,4177,10,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17331e-10;MQSB=0.998563;RPB=0.633086;SGB=-197.657;VDB=0.621509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I1275N|1331|LOC_Os07g26390|protein_coding|CODING|LOC_Os07g26390.1|6|1) FN2347.SNP.7:15165044 chr07:015165044 0 W/15165044-15165044 FN2347 SNP C -> T AC=1;AN=192;BQB=0.820013;DP=9242;DP4=4390,4374,23,20;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000757412;MQB=2.01828e-07;MQSB=0.59683;RPB=0.993537;SGB=143.146;VDB=0.136101;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1120|1331|LOC_Os07g26390|protein_coding|CODING|LOC_Os07g26390.1|6|1) FN3576-S.SNP.7:15165044 chr07:015165044 0 W/15165044-15165044 FN3576-S SNP C -> T AC=1;AN=188;BQB=0.981155;DP=6016;DP4=2767,3123,20,27;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00099734;MQB=1.95144e-06;MQSB=0.0614872;RPB=0.999314;SGB=104.918;VDB=0.476869;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1120|1331|LOC_Os07g26390|protein_coding|CODING|LOC_Os07g26390.1|6|1) FN3437-S.SNP.7:15170724 chr07:015170724 0 W/15170724-15170724 FN3437-S SNP G -> C AC=1;AN=184;BQB=0.503583;DP=3506;DP4=1844,1548,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0245294;MQB=2.02655e-05;MQSB=7.0854e-11;RPB=0.0121466;SGB=-140.209;VDB=0.160902;EFF=INTRON(MODIFIER||||311|LOC_Os07g26400|protein_coding|CODING|LOC_Os07g26400.1|1|1) FN1515-S.SNP.7:15177008 chr07:015177008 0 W/15177008-15177008 FN1515-S Single Base Substitution T-C INTRON HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN4312-S.SNP.7:15178283 chr07:015178283 0 W/15178283-15178283 FN4312-S SNP C -> A AC=1;AN=170;BQB=0.858662;DP=2921;DP4=1400,1414,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.85301e-07;MQSB=0.93485;RPB=0.998751;SGB=43.4296;VDB=0.378362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.7:15181954 chr07:015181954 0 W/15181954-15181954 FN1662-S Single Base Substitution C-T INTERGENIC Homo SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2340.SNP.7:15181954 chr07:015181954 0 W/15181954-15181954 FN2340 SNP C -> T AC=2;AN=192;BQB=0.058499;DP=4899;DP4=2392,2175,26,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.39875e-18;MQSB=0.214078;RPB=0.335202;SGB=-48.833;VDB=0.889531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.7:15181954 chr07:015181954 0 W/15181954-15181954 FN2563-S SNP C -> T AC=2;AN=198;BQB=0.0735933;DP=4388;DP4=2205,1941,13,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.42175e-08;MQSB=0.147421;RPB=0.709791;SGB=12.5396;VDB=0.0739847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.7:15183111 chr07:015183111 0 W/15183111-15183111 FN1064-S Single Base Substitution G-A INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1163-S.SNP.7:15188118 chr07:015188118 0 W/15188118-15188118 FN1163-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN737-S.SNP.7:15191613 chr07:015191613 0 W/15191613-15191613 FN737-S Single Base Substitution C-G INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN1741-S.SNP.7:15199943 chr07:015199943 0 W/15199943-15199943 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.95866;DP=3896;DP4=1834,2002,15,27;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74441e-20;MQSB=0.939276;RPB=0.359374;SGB=-187.026;VDB=0.308235;EFF=INTRON(MODIFIER||||1448|LOC_Os07g26430|protein_coding|CODING|LOC_Os07g26430.1|5|1) FN3981-S.SNP.7:15202789 chr07:015202789 0 W/15202789-15202789 FN3981-S SNP C -> A AC=2;AN=168;BQB=0.993016;DP=2510;DP4=1228,1160,9,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.31353e-15;MQSB=0.877552;RPB=0.851204;SGB=109.773;VDB=0.274958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.7:15202790 chr07:015202790 0 W/15202790-15202790 FN3981-S SNP T -> A AC=2;AN=168;BQB=0.663511;DP=2505;DP4=1220,1164,8,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.76508e-16;MQSB=0.870623;RPB=0.874349;SGB=82.7794;VDB=0.621803;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.7:15204611 chr07:015204611 0 W/15204611-15204611 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.899229;DP=2616;DP4=1118,1423,6,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.57492e-12;MQSB=0.992228;RPB=0.413106;SGB=38.2092;VDB=0.0946812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G819E|877|LOC_Os07g26440|protein_coding|CODING|LOC_Os07g26440.1|10|1),UTR_3_PRIME(MODIFIER||235||814|LOC_Os07g26440|protein_coding|CODING|LOC_Os07g26440.2|11|1) FN1421-S.SNP.7:15219379 chr07:015219379 0 W/15219379-15219379 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2327.SNP.7:15233090 chr07:015233090 0 W/15233090-15233090 FN2327 SNP C -> G AC=1;AN=192;BQB=0.999972;DP=4246;DP4=1869,2098,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000471032;MQB=8.25633e-09;MQSB=0.106236;RPB=0.415048;SGB=10.4835;VDB=0.727852;EFF=UTR_3_PRIME(MODIFIER||200||251|LOC_Os07g26480|protein_coding|CODING|LOC_Os07g26480.1|5|1),UTR_3_PRIME(MODIFIER||200||251|LOC_Os07g26480|protein_coding|CODING|LOC_Os07g26480.2|5|1) FN-399.SNP.7:15235444 chr07:015235444 0 W/15235444-15235444 FN-399 Single Base Substitution T-C INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.7:15235444 chr07:015235444 0 W/15235444-15235444 FN399-S Single Base Substitution T-C INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN1658-S.SNP.7:15237861 chr07:015237861 0 W/15237861-15237861 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.244923;DP=2794;DP4=1273,1455,12,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.64015e-11;MQSB=0.950586;RPB=0.998525;SGB=85.5904;VDB=0.811352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A385V|513|LOC_Os07g26490|protein_coding|CODING|LOC_Os07g26490.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A362V|490|LOC_Os07g26490|protein_coding|CODING|LOC_Os07g26490.2|9|1) FN2498.SNP.7:15238251 chr07:015238251 0 W/15238251-15238251 FN2498 SNP A -> G AC=2;AN=200;BQB=0.798602;DP=4438;DP4=2106,1964,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.71229e-17;MQSB=0.210294;RPB=0.776529;SGB=94.6142;VDB=0.827551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V255A|513|LOC_Os07g26490|protein_coding|CODING|LOC_Os07g26490.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V232A|490|LOC_Os07g26490|protein_coding|CODING|LOC_Os07g26490.2|9|1) FN1449-S.SNP.7:15246610 chr07:015246610 0 W/15246610-15246610 FN1449-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2646-S.SNP.7:15247417 chr07:015247417 0 W/15247417-15247417 FN2646-S SNP G -> T AC=1;AN=200;BQB=0.980068;DP=5053;DP4=2254,2532,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72548e-14;MQSB=0.972684;RPB=0.97675;SGB=69.1109;VDB=0.908497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.7:15251549 chr07:015251549 0 W/15251549-15251549 FN4149-S SNP A -> T AC=1;AN=170;BQB=0.303162;DP=2721;DP4=1373,1274,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.22118e-05;MQSB=0.595376;RPB=0.134362;SGB=24.5502;VDB=0.376037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.7:15263996 chr07:015263996 0 W/15263996-15263996 FN2469 SNP C -> A AC=1;AN=200;BQB=0.768807;DP=4102;DP4=1674,2153,5,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000243784;MQB=7.81248e-11;MQSB=0.233857;RPB=0.758202;SGB=100.316;VDB=0.0805947;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.7:15272676 chr07:015272676 0 W/15272676-15272676 FN541-S Single Base Substitution G-A INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4049-S.SNP.7:15290354 chr07:015290354 0 W/15290354-15290354 FN4049-S SNP A -> T AC=1;AN=168;BQB=0.789434;DP=2465;DP4=1193,1148,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000194977;MQSB=0.994794;RPB=0.712421;SGB=38.8805;VDB=0.340495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1431-S.SNP.7:15294138 chr07:015294138 0 W/15294138-15294138 FN1431-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN3470-S.SNP.7:15295758 chr07:015295758 0 W/15295758-15295758 FN3470-S SNP C -> T AC=1;AN=184;BQB=0.925485;DP=2390;DP4=1049,1259,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.31335e-09;MQSB=0.792213;RPB=0.96864;SGB=53.3568;VDB=0.062996;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D52N|74|LOC_Os07g26550|protein_coding|CODING|LOC_Os07g26550.1|2|1) FN2313.SNP.7:15301851 chr07:015301851 0 W/15301851-15301851 FN2313 SNP T -> A AC=2;AN=192;BQB=0.119729;DP=5255;DP4=2604,2296,22,27;HOB=0.0206163;ICB=0.494846;MQ=35;MQ0F=0.18725;MQB=0.318225;MQSB=4.3664e-10;RPB=0.649815;SGB=-103.263;VDB=0.274613;EFF=INTRON(MODIFIER||||721|LOC_Os07g26560|protein_coding|CODING|LOC_Os07g26560.1|1|1) FN4022-S.SNP.7:15312515 chr07:015312515 0 W/15312515-15312515 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.900138;DP=2447;DP4=1214,1147,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.10132e-09;MQSB=0.978765;RPB=0.99252;SGB=38.1788;VDB=0.696731;EFF=UTR_3_PRIME(MODIFIER||731||144|LOC_Os07g26595|protein_coding|CODING|LOC_Os07g26595.1|1|1) FN4164-S.SNP.7:15312998 chr07:015312998 0 W/15312998-15312998 FN4164-S SNP A -> T AC=1;AN=170;BQB=0.999031;DP=2197;DP4=1019,1097,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.9269e-09;MQSB=0.80261;RPB=0.331044;SGB=56.7575;VDB=0.804154;EFF=UTR_3_PRIME(MODIFIER||248||144|LOC_Os07g26595|protein_coding|CODING|LOC_Os07g26595.1|1|1) FN1403-S.SNP.7:15316028 chr07:015316028 0 W/15316028-15316028 FN1403-S Single Base Substitution C-T INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2421.SNP.7:15322231 chr07:015322231 0 W/15322231-15322231 FN2421 SNP A -> C AC=1;AN=200;BQB=0.506525;DP=4635;DP4=2149,2272,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00021575;MQB=1.23297e-13;MQSB=0.894594;RPB=0.983708;SGB=20.7261;VDB=0.991755;EFF=INTRON(MODIFIER||||108|LOC_Os07g26600|protein_coding|CODING|LOC_Os07g26600.1|2|1) FN915-S.SNP.7:15322413 chr07:015322413 0 W/15322413-15322413 FN915-S Single Base Substitution C-T INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN-365.SNP.7:15325383 chr07:015325383 0 W/15325383-15325383 FN-365 Single Base Substitution G-T INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN-365.SNP.7:15325419 chr07:015325419 0 W/15325419-15325419 FN-365 Single Base Substitution G-A INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN1725-S.SNP.7:15327560 chr07:015327560 0 W/15327560-15327560 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.00951791;DP=4336;DP4=2139,2144,19,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.34986e-10;MQSB=0.966489;RPB=0.943677;SGB=-258.275;VDB=0.304442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.7:15329683 chr07:015329683 0 W/15329683-15329683 FN2655-S SNP A -> G AC=1;AN=200;BQB=0.899294;DP=4185;DP4=2163,1864,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9263e-12;MQSB=0.920356;RPB=0.177701;SGB=58.2954;VDB=0.721417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.7:15336150 chr07:015336150 0 W/15336150-15336150 FN2441 SNP A -> T AC=2;AN=200;BQB=0.785558;DP=4488;DP4=2145,2024,30,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.99331e-25;MQSB=0.781291;RPB=0.762857;SGB=155.635;VDB=0.722735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1285-S.SNP.7:15345061 chr07:015345061 0 W/15345061-15345061 FN1285-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g26610 phosphoglucomutase, putative, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN-59.SNP.7:15351954 chr07:015351954 0 W/15351954-15351954 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2667-S.SNP.7:15372330 chr07:015372330 0 W/15372330-15372330 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.966357;DP=4677;DP4=2320,2106,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.95963e-11;MQSB=0.982017;RPB=0.856871;SGB=29.4849;VDB=0.314006;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.7:15376452 chr07:015376452 0 W/15376452-15376452 W23-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN1262-S.SNP.7:15378907 chr07:015378907 0 W/15378907-15378907 FN1262-S Single Base Substitution C-T INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1262-S.SNP.7:15378911 chr07:015378911 0 W/15378911-15378911 FN1262-S Single Base Substitution T-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN-164.SNP.7:15385210 chr07:015385210 0 W/15385210-15385210 FN-164 Single Base Substitution C-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2782-S.SNP.7:15385328 chr07:015385328 0 W/15385328-15385328 FN2782-S SNP T -> C AC=1;AN=198;BQB=0.634754;DP=3909;DP4=1675,1922,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00025582;MQB=8.10177e-14;MQSB=0.637612;RPB=0.650616;SGB=52.7004;VDB=0.303087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.7:15390130 chr07:015390130 0 W/15390130-15390130 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.98809;DP=4534;DP4=2052,2128,24,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19745e-16;MQSB=0.265118;RPB=0.251399;SGB=101.557;VDB=0.535881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.7:15390164 chr07:015390164 0 W/15390164-15390164 FN2219-S SNP A -> T AC=1;AN=190;BQB=0.194353;DP=3485;DP4=1220,1975,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000286944;MQB=0.000180243;MQSB=0.179273;RPB=0.835915;SGB=-15.9914;VDB=0.804154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.7:15395494 chr07:015395494 0 W/15395494-15395494 FN1233-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN4247-S.SNP.7:15404764 chr07:015404764 0 W/15404764-15404764 FN4247-S SNP G -> A AC=1;AN=170;BQB=0.999779;DP=3079;DP4=1487,1499,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.00516e-08;MQSB=0.91138;RPB=0.87715;SGB=56.7575;VDB=0.200115;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.7:15406621 chr07:015406621 0 W/15406621-15406621 FN-287 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g26690 aquaporin protein, putative, expressed SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN3707-S.SNP.7:15412757 chr07:015412757 0 W/15412757-15412757 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.454382;DP=2457;DP4=1098,1226,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00211777;MQSB=0.911305;RPB=0.637031;SGB=25.439;VDB=0.205475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.7:15414217 chr07:015414217 0 W/15414217-15414217 FN2656-S SNP T -> C AC=1;AN=200;BQB=0.469037;DP=4745;DP4=2335,1995,19,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64157e-13;MQSB=0.980581;RPB=0.471525;SGB=79.9264;VDB=0.22152;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.7:15415274 chr07:015415274 0 W/15415274-15415274 FN1025-S Single Base Substitution G-T INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3297-S.SNP.7:15417988 chr07:015417988 0 W/15417988-15417988 FN3297-S SNP A -> G AC=2;AN=184;BQB=0.996268;DP=2921;DP4=1637,1138,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.49353e-12;MQSB=0.954366;RPB=0.945044;SGB=78.0093;VDB=0.618134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.7:15419183 chr07:015419183 0 W/15419183-15419183 FN2345 SNP T -> G AC=1;AN=192;BQB=0.778451;DP=4471;DP4=1944,2246,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23346e-14;MQSB=0.924176;RPB=0.90863;SGB=-8.56084;VDB=0.342426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.7:15420530 chr07:015420530 0 W/15420530-15420530 FN2381 SNP T -> C AC=1;AN=192;BQB=0.404425;DP=4467;DP4=2136,1836,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.71189e-07;MQSB=0.0448908;RPB=0.912697;SGB=23.7852;VDB=0.782605;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.7:15420549 chr07:015420549 0 W/15420549-15420549 FN1186-S Single Base Substitution G-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN478-S.SNP.7:15421798 chr07:015421798 0 W/15421798-15421798 FN478-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2441.SNP.7:15428325 chr07:015428325 0 W/15428325-15428325 FN2441 SNP T -> A AC=2;AN=200;BQB=0.381053;DP=4557;DP4=1982,2217,24,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000219443;MQB=6.66599e-28;MQSB=0.232696;RPB=0.815899;SGB=120.666;VDB=0.0338869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.7:15436487 chr07:015436487 0 W/15436487-15436487 FN1231-S Single Base Substitution A-T INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN3773-S.SNP.7:15439718 chr07:015439718 0 W/15439718-15439718 FN3773-S SNP A -> C AC=1;AN=190;BQB=0.297574;DP=2862;DP4=1237,1436,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00386012;MQSB=0.931308;RPB=0.865638;SGB=10.8904;VDB=0.656326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.7:15444095 chr07:015444095 0 W/15444095-15444095 FN-247 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g26730 expressed protein SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2445.SNP.7:15447511 chr07:015447511 0 W/15447511-15447511 FN2445 SNP T -> C AC=1;AN=200;BQB=0.173157;DP=3512;DP4=1416,1406,4,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0128132;MQB=0.19257;MQSB=0;RPB=0.396944;SGB=-33.3414;VDB=0.68905;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.7:15448998 chr07:015448998 0 W/15448998-15448998 FN4032-S SNP C -> A AC=2;AN=166;BQB=0.184877;DP=2516;DP4=1121,1273,15,10;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=2.33955e-12;MQSB=0.99905;RPB=0.220241;SGB=105.343;VDB=0.203558;EFF=INTRON(MODIFIER||||105|LOC_Os07g26740|protein_coding|CODING|LOC_Os07g26740.1|1|1) FN4032-S.SNP.7:15448999 chr07:015448999 0 W/15448999-15448999 FN4032-S SNP T -> C AC=2;AN=166;BQB=0.817958;DP=2514;DP4=1116,1225,18,14;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=2.47275e-17;MQSB=0.996246;RPB=0.458742;SGB=27.0838;VDB=0.329381;EFF=INTRON(MODIFIER||||105|LOC_Os07g26740|protein_coding|CODING|LOC_Os07g26740.1|1|1) FN1582-S.SNP.7:15452983 chr07:015452983 0 W/15452983-15452983 FN1582-S Single Base Substitution G-T INTERGENIC Homo SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN2221-S.SNP.7:15455767 chr07:015455767 0 W/15455767-15455767 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.8999;DP=4830;DP4=1946,2572,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207039;MQB=1.31559e-15;MQSB=0.999237;RPB=0.806046;SGB=107.178;VDB=0.835822;EFF=INTERGENIC(MODIFIER||||||||||1) FN_772-3-1.SNP.7:15467568 chr07:015467568 0 W/15467568-15467568 FN_772-3-1 Single Base Substitution C-T HET LOC_Os07g26780 retrotransposon protein, putative, unclassified, expressed SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1515-S.SNP.7:15467890 chr07:015467890 0 W/15467890-15467890 FN1515-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2301.SNP.7:15472204 chr07:015472204 0 W/15472204-15472204 FN2301 SNP T -> A AC=1;AN=192;BQB=0.877681;DP=5594;DP4=2794,2501,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00375402;MQB=5.8388e-05;MQSB=0.359999;RPB=0.509683;SGB=18.6565;VDB=0.556519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I524F|1662|LOC_Os07g26780|protein_coding|CODING|LOC_Os07g26780.1|1|1) FN1340-S.SNP.7:15473248 chr07:015473248 0 W/15473248-15473248 FN1340-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g26780 retrotransposon protein, putative, unclassified, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1340-S.SNP.7:15473249 chr07:015473249 0 W/15473249-15473249 FN1340-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN_N1-169-1.SNP.7:15473762 chr07:015473762 0 W/15473762-15473762 FN_N1-169-1 Single Base Substitution T-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1340-S.SNP.7:15477806 chr07:015477806 0 W/15477806-15477806 FN1340-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN3387-S.SNP.7:15480822 chr07:015480822 0 W/15480822-15480822 FN3387-S SNP G -> T AC=1;AN=184;BQB=0.999996;DP=2488;DP4=914,1501,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.71237e-08;MQSB=0.770744;RPB=0.602173;SGB=53.2642;VDB=0.355085;EFF=INTERGENIC(MODIFIER||||||||||1) FN4146-S.SNP.7:15482125 chr07:015482125 0 W/15482125-15482125 FN4146-S SNP C -> T AC=1;AN=170;BQB=0.850465;DP=2567;DP4=1425,1045,13,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.84083e-10;MQSB=0.987078;RPB=0.999949;SGB=87.856;VDB=0.852508;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.7:15482443 chr07:015482443 0 W/15482443-15482443 FN907-S Single Base Substitution G-A INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN449-S.SNP.7:15483473 chr07:015483473 0 W/15483473-15483473 FN449-S Single Base Substitution T-C INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3417-S.SNP.7:15484761 chr07:015484761 0 W/15484761-15484761 FN3417-S SNP T -> G AC=1;AN=184;BQB=0.980542;DP=3428;DP4=1552,1694,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37264e-14;MQSB=0.931242;RPB=0.697351;SGB=78.0093;VDB=0.759476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.7:15488506 chr07:015488506 0 W/15488506-15488506 FN2353 SNP T -> C AC=1;AN=192;BQB=0.733035;DP=4820;DP4=2217,2160,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207469;MQB=3.6231e-09;MQSB=0.911248;RPB=0.919083;SGB=-11.3826;VDB=0.68596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L180P|733|LOC_Os07g26800|protein_coding|CODING|LOC_Os07g26800.1|1|1) FN2638-S.SNP.7:15491018 chr07:015491018 0 W/15491018-15491018 FN2638-S SNP C -> A AC=1;AN=200;BQB=0.946986;DP=4892;DP4=2444,2192,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29393e-12;MQSB=0.859902;RPB=0.998857;SGB=15.9106;VDB=0.941136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.7:15508273 chr07:015508273 0 W/15508273-15508273 FN3879-S SNP A -> G AC=2;AN=158;BQB=0.739209;DP=2174;DP4=1033,997,21,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.82878e-24;MQSB=0.995186;RPB=0.96923;SGB=172.836;VDB=0.443663;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.7:15509092 chr07:015509092 0 W/15509092-15509092 FN_N1-202-3 Single Base Substitution C-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN511-S.SNP.7:15515923 chr07:015515923 0 W/15515923-15515923 FN511-S Single Base Substitution C-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1554-37-38.SNP.7:15523230 chr07:015523230 0 W/15523230-15523230 FN1554-37-38 SNP C -> T AC=1;AN=190;BQB=0.850696;DP=4530;DP4=2021,2174,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46683e-10;MQSB=0.942087;RPB=0.753273;SGB=-13.222;VDB=0.562221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.7:15523331 chr07:015523331 0 W/15523331-15523331 FN1690-S SNP C -> T AC=2;AN=188;BQB=0.0110023;DP=2646;DP4=1293,1299,18,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.39207e-08;MQSB=0.650809;RPB=0.91642;SGB=-180.083;VDB=0.341735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.7:15528251 chr07:015528251 0 W/15528251-15528251 FN1120-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN4016-S.SNP.7:15532340 chr07:015532340 0 W/15532340-15532340 FN4016-S SNP C -> T AC=2;AN=168;BQB=0.995339;DP=2937;DP4=1586,1236,18,16;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0330269;MQB=0.73065;MQSB=2.45643e-14;RPB=0.803394;SGB=106.795;VDB=0.125633;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.7:15534597 chr07:015534597 0 W/15534597-15534597 FN819-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g26850 retrotransposon protein, putative, unclassified, expressed SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN1547-S.SNP.7:15535486 chr07:015535486 0 W/15535486-15535486 FN1547-S Single Base Substitution A-G INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN990-S.SNP.7:15538876 chr07:015538876 0 W/15538876-15538876 FN990-S Single Base Substitution T-C INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN4138-S.SNP.7:15542326 chr07:015542326 0 W/15542326-15542326 FN4138-S SNP A -> G AC=1;AN=170;BQB=0.976444;DP=2395;DP4=1041,1273,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.26361e-08;MQSB=0.718682;RPB=0.54745;SGB=19.8839;VDB=0.604518;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.7:15547163 chr07:015547163 0 W/15547163-15547163 FN873-S Single Base Substitution T-C INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1438-S.SNP.7:15553849 chr07:015553849 0 W/15553849-15553849 FN1438-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1151-S.SNP.7:15556323 chr07:015556323 0 W/15556323-15556323 FN1151-S Single Base Substitution A-G INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3781-S.SNP.7:15557053 chr07:015557053 0 W/15557053-15557053 FN3781-S SNP C -> A AC=2;AN=190;BQB=0.801536;DP=2991;DP4=1463,1374,17,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.91202e-14;MQSB=0.998464;RPB=0.976481;SGB=96.5165;VDB=0.294844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.7:15557058 chr07:015557058 0 W/15557058-15557058 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.06775;DP=4980;DP4=2479,1962,23,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.73494e-16;MQSB=0.95259;RPB=0.955357;SGB=-123.006;VDB=0.923618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.7:15573198 chr07:015573198 0 W/15573198-15573198 FN1403-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2782-S.SNP.7:15577405 chr07:015577405 0 W/15577405-15577405 FN2782-S SNP A -> T AC=1;AN=198;BQB=0.574918;DP=4492;DP4=2085,2010,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.60667e-16;MQSB=0.385004;RPB=0.850946;SGB=22.1104;VDB=0.177941;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.7:15587724 chr07:015587724 0 W/15587724-15587724 FN4106-S SNP C -> T AC=1;AN=182;BQB=0.915613;DP=2664;DP4=1003,1503,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.05858e-07;MQSB=0.134401;RPB=0.833963;SGB=39.1386;VDB=0.123939;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.7:15592494 chr07:015592494 0 W/15592494-15592494 FN530-S Single Base Substitution G-A INTERGENIC HOMO SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN870-S.SNP.7:15594742 chr07:015594742 0 W/15594742-15594742 FN870-S Single Base Substitution G-A INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN846-S.SNP.7:15599599 chr07:015599599 0 W/15599599-15599599 FN846-S Single Base Substitution C-G INTRON HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3677-S.SNP.7:15601024 chr07:015601024 0 W/15601024-15601024 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.239281;DP=2809;DP4=1271,1423,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000202339;MQSB=0.974285;RPB=0.218188;SGB=36.1006;VDB=0.585809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.7:15610886 chr07:015610886 0 W/15610886-15610886 FN3460-S SNP G -> C AC=1;AN=184;BQB=0.932278;DP=3065;DP4=1337,1632,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.99258e-09;MQSB=0.996425;RPB=0.0353895;SGB=39.2697;VDB=0.0251516;EFF=INTRON(MODIFIER||||108|LOC_Os07g26950|protein_coding|CODING|LOC_Os07g26950.1|2|1) FN3358-S.SNP.7:15613589 chr07:015613589 0 W/15613589-15613589 FN3358-S SNP C -> T AC=2;AN=184;BQB=0.933291;DP=2812;DP4=1389,1305,12,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.59484e-16;MQSB=0.976201;RPB=0.912138;SGB=-7.40898;VDB=0.542629;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.7:15614080 chr07:015614080 0 W/15614080-15614080 FN-344 Single Base Substitution T-C INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN-316.SNP.7:15632644 chr07:015632644 0 W/15632644-15632644 FN-316 Single Base Substitution G-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN860-S.SNP.7:15634834 chr07:015634834 0 W/15634834-15634834 FN860-S Single Base Substitution G-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN859-S.SNP.7:15640453 chr07:015640453 0 W/15640453-15640453 FN859-S Single Base Substitution G-T INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN773-S.SNP.7:15643570 chr07:015643570 0 W/15643570-15643570 FN773-S Single Base Substitution G-A INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN415-S.SNP.7:15645573 chr07:015645573 0 W/15645573-15645573 FN415-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g27010 retrotransposon protein, putative, unclassified, expressed SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1193-S.SNP.7:15646158 chr07:015646158 0 W/15646158-15646158 FN1193-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1326-S.SNP.7:15654076 chr07:015654076 0 W/15654076-15654076 FN1326-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN773-S.SNP.7:15654410 chr07:015654410 0 W/15654410-15654410 FN773-S Single Base Substitution G-T INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN773-S.SNP.7:15654411 chr07:015654411 0 W/15654411-15654411 FN773-S Single Base Substitution G-T INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN945-S.SNP.7:15656114 chr07:015656114 0 W/15656114-15656114 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2472.SNP.7:15658427 chr07:015658427 0 W/15658427-15658427 FN2472 SNP A -> T AC=1;AN=200;BQB=0.999853;DP=4748;DP4=2039,2459,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.5976e-07;MQSB=0.999539;RPB=0.753439;SGB=25.849;VDB=0.794525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.7:15662125 chr07:015662125 0 W/15662125-15662125 FN3359-S SNP A -> T AC=1;AN=184;BQB=0.99697;DP=2638;DP4=1327,1221,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24709e-06;MQSB=0.994118;RPB=0.84106;SGB=32.2261;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.7:15662842 chr07:015662842 0 W/15662842-15662842 FN3490-S SNP T -> A AC=2;AN=184;BQB=0.810803;DP=2713;DP4=1339,1259,10,14;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=4.79714e-08;MQSB=0.980575;RPB=0.953879;SGB=74.4875;VDB=0.395259;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.7:15679378 chr07:015679378 0 W/15679378-15679378 FN2199-S SNP G -> C AC=1;AN=190;BQB=0.784978;DP=5114;DP4=2157,2492,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.4652e-10;MQSB=0.962124;RPB=0.311417;SGB=14.9883;VDB=0.220821;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.7:15686543 chr07:015686543 0 W/15686543-15686543 FN864-S Single Base Substitution A-T INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3830-S.SNP.7:15693820 chr07:015693820 0 W/15693820-15693820 FN3830-S SNP A -> G AC=1;AN=190;BQB=0.990066;DP=2721;DP4=1251,1368,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000367512;MQB=2.36797e-09;MQSB=0.966119;RPB=0.586939;SGB=71.8647;VDB=0.256213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.7:15694786 chr07:015694786 0 W/15694786-15694786 FN3830-S SNP T -> A AC=1;AN=190;BQB=0.731043;DP=2584;DP4=1297,1202,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0119969;MQB=0.213316;MQSB=0.946949;RPB=0.723003;SGB=39.6545;VDB=0.668518;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y149N|1322|LOC_Os07g27080|protein_coding|CODING|LOC_Os07g27080.1|1|1) FN3442-S.SNP.7:15703170 chr07:015703170 0 W/15703170-15703170 FN3442-S SNP T -> C AC=1;AN=184;BQB=0.997939;DP=2686;DP4=1378,1216,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.65941e-08;MQSB=0.85444;RPB=0.877344;SGB=39.2697;VDB=0.927913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.7:15704616 chr07:015704616 0 W/15704616-15704616 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.855032;DP=1707;DP4=565,1030,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00175747;MQB=0.0168609;MQSB=1.99516e-07;RPB=0.81323;SGB=35.1773;VDB=0.860992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.7:15717268 chr07:015717268 0 W/15717268-15717268 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.613453;DP=2749;DP4=1515,1184,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000496913;MQSB=0.898949;RPB=0.397245;SGB=35.1773;VDB=0.687358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.7:15730642 chr07:015730642 0 W/15730642-15730642 FN3670-S SNP T -> C AC=1;AN=190;BQB=0.533935;DP=3204;DP4=1397,1703,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00031211;MQB=7.68398e-08;MQSB=0.876857;RPB=0.969046;SGB=11.8805;VDB=0.206603;EFF=INTRON(MODIFIER||||165|LOC_Os07g27130|protein_coding|CODING|LOC_Os07g27130.1|1|1) FN1527-S.SNP.7:15731244 chr07:015731244 0 W/15731244-15731244 FN1527-S Single Base Substitution G-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2658-S.SNP.7:15733876 chr07:015733876 0 W/15733876-15733876 FN2658-S SNP C -> T AC=2;AN=200;BQB=0.615538;DP=5296;DP4=2663,2354,23,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000188822;MQB=1.94396e-27;MQSB=0.466815;RPB=0.920084;SGB=197.025;VDB=0.309343;EFF=UTR_3_PRIME(MODIFIER||2910||1009|LOC_Os07g27140|protein_coding|CODING|LOC_Os07g27140.1|22|1) FN443-S.SNP.7:15735367 chr07:015735367 0 W/15735367-15735367 FN443-S Single Base Substitution G-C INTRON HOMO SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN876-S.SNP.7:15740692 chr07:015740692 0 W/15740692-15740692 FN876-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g27140 AT hook motif family protein, expressed SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN558-S.SNP.7:15741631 chr07:015741631 0 W/15741631-15741631 FN558-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN912-S.SNP.7:15743899 chr07:015743899 0 W/15743899-15743899 FN912-S Single Base Substitution A-T INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2584-S.SNP.7:15750924 chr07:015750924 0 W/15750924-15750924 FN2584-S SNP G -> T AC=1;AN=186;BQB=0.270084;DP=3854;DP4=1562,1985,15,13;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=3.89897e-12;MQSB=0.558399;RPB=0.396831;SGB=90.4807;VDB=0.480112;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.7:15751722 chr07:015751722 0 W/15751722-15751722 FN1633-S Single Base Substitution G-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN_N1-151-7.SNP.7:15766708 chr07:015766708 0 W/15766708-15766708 FN_N1-151-7 Single Base Substitution G-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2471.SNP.7:15771144 chr07:015771144 0 W/15771144-15771144 FN2471 SNP C -> T AC=1;AN=200;BQB=0.392557;DP=4327;DP4=2269,1764,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18307e-15;MQSB=0.713506;RPB=0.951132;SGB=108.768;VDB=0.370025;EFF=INTRON(MODIFIER||||918|LOC_Os07g27180|protein_coding|CODING|LOC_Os07g27180.1|20|1) FN-191.SNP.7:15794106 chr07:015794106 0 W/15794106-15794106 FN-191 Single Base Substitution C-G INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1643-S.SNP.7:15796414 chr07:015796414 0 W/15796414-15796414 FN1643-S Single Base Substitution C-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN875-S.SNP.7:15798457 chr07:015798457 0 W/15798457-15798457 FN875-S Single Base Substitution G-T INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN2395.SNP.7:15798670 chr07:015798670 0 W/15798670-15798670 FN2395 SNP C -> T AC=1;AN=200;BQB=0.0193906;DP=3612;DP4=1251,1947,14,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.50731e-06;MQSB=0.168577;RPB=0.378861;SGB=14.3054;VDB=0.0376306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.7:15804851 chr07:015804851 0 W/15804851-15804851 FN1224-S Single Base Substitution G-A INTRON HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN-363.SNP.7:15805008 chr07:015805008 0 W/15805008-15805008 FN-363 Single Base Substitution C-G INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1193-S.SNP.7:15809891 chr07:015809891 0 W/15809891-15809891 FN1193-S Single Base Substitution C-A INTRON HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN4149-S.SNP.7:15813403 chr07:015813403 0 W/15813403-15813403 FN4149-S SNP G -> A AC=2;AN=170;BQB=0.585949;DP=2444;DP4=1164,1203,8,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.54114e-11;MQSB=0.980939;RPB=0.07004;SGB=32.0972;VDB=0.752323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.7:15817855 chr07:015817855 0 W/15817855-15817855 FN2476 SNP G -> A AC=1;AN=200;BQB=0.285632;DP=4861;DP4=2200,2322,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36631e-16;MQSB=0.766165;RPB=0.454162;SGB=58.1418;VDB=0.861286;EFF=INTRON(MODIFIER||||276|LOC_Os07g27220|protein_coding|CODING|LOC_Os07g27220.1|2|1) FN889-S.SNP.7:15821097 chr07:015821097 0 W/15821097-15821097 FN889-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g27230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN889-S.SNP.7:15821098 chr07:015821098 0 W/15821098-15821098 FN889-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. W502-3-4.SNP.7:15821230 chr07:015821230 0 W/15821230-15821230 W502-3-4 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN4175-S.SNP.7:15821976 chr07:015821976 0 W/15821976-15821976 FN4175-S SNP G -> A AC=2;AN=170;BQB=0.955572;DP=2471;DP4=1153,1247,12,13;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=5.53883e-09;MQSB=0.961127;RPB=0.822173;SGB=105.627;VDB=0.903167;EFF=INTRON(MODIFIER||||1315|LOC_Os07g27230|protein_coding|CODING|LOC_Os07g27230.1|8|1) FN475-S.SNP.7:15825732 chr07:015825732 0 W/15825732-15825732 FN475-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g27230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1644-S.SNP.7:15831433 chr07:015831433 0 W/15831433-15831433 FN1644-S Single Base Substitution C-A INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3577-S.SNP.7:15832346 chr07:015832346 0 W/15832346-15832346 FN3577-S SNP G -> C AC=2;AN=188;BQB=0.968987;DP=2306;DP4=1279,925,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.63852e-11;MQSB=0.674218;RPB=0.590106;SGB=89.8686;VDB=0.632184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.7:15832576 chr07:015832576 0 W/15832576-15832576 FN3976-S SNP G -> T AC=1;AN=168;BQB=0.813907;DP=1698;DP4=968,665,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00386297;MQSB=0.76656;RPB=0.916737;SGB=30.0193;VDB=0.253906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.7:15837925 chr07:015837925 0 W/15837925-15837925 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.656694;DP=4708;DP4=2446,2007,10,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.14703e-17;MQSB=0.295732;RPB=0.946358;SGB=118.737;VDB=0.606847;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.7:15855137 chr07:015855137 0 W/15855137-15855137 FN378-S Single Base Substitution C-A INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN465-S.SNP.7:15855954 chr07:015855954 0 W/15855954-15855954 FN465-S Single Base Substitution A-G INTERGENIC HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2360.SNP.7:15859630 chr07:015859630 0 W/15859630-15859630 FN2360 SNP G -> A AC=1;AN=192;BQB=0.119192;DP=5010;DP4=2383,2331,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.22686e-08;MQSB=0.997364;RPB=0.999889;SGB=-11.9469;VDB=0.9274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1534-S.SNP.7:15861472 chr07:015861472 0 W/15861472-15861472 FN1534-S Single Base Substitution A-C INTRON HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1158-S.SNP.7:15864705 chr07:015864705 0 W/15864705-15864705 FN1158-S Single Base Substitution G-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3857-S.SNP.7:15867833 chr07:015867833 0 W/15867833-15867833 FN3857-S SNP A -> G AC=2;AN=158;BQB=0.993742;DP=2604;DP4=1246,1236,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.06728e-12;MQSB=0.915886;RPB=0.593172;SGB=45.1437;VDB=0.612323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.7:15882707 chr07:015882707 0 W/15882707-15882707 FN2213-S SNP T -> C AC=1;AN=190;BQB=0.599894;DP=5298;DP4=2475,2558,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.21624e-16;MQSB=0.822205;RPB=0.998665;SGB=112.85;VDB=0.525061;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.7:15882759 chr07:015882759 0 W/15882759-15882759 FN516-S Single Base Substitution C-A INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN2167-S.SNP.7:15890172 chr07:015890172 0 W/15890172-15890172 FN2167-S SNP C -> A AC=1;AN=168;BQB=0.0610591;DP=2430;DP4=738,1668,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000196651;MQSB=0.709592;RPB=0.977234;SGB=-34.9514;VDB=0.150414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.7:15896501 chr07:015896501 0 W/15896501-15896501 FN1152-S Single Base Substitution C-T INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2300.SNP.7:15900112 chr07:015900112 0 W/15900112-15900112 FN2300 SNP G -> A AC=1;AN=192;BQB=0.690501;DP=3651;DP4=1922,1366,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000351497;MQSB=0.414734;RPB=0.830567;SGB=40.0819;VDB=0.667402;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A647|776|LOC_Os07g27330|protein_coding|CODING|LOC_Os07g27330.1|1|1) FN3518-S.SNP.7:15904437 chr07:015904437 0 W/15904437-15904437 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.940331;DP=2865;DP4=1274,1519,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69394e-08;MQSB=0.991741;RPB=0.850911;SGB=62.6088;VDB=0.494283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.7:15905464 chr07:015905464 0 W/15905464-15905464 FN2310 SNP C -> G AC=1;AN=192;BQB=0.732089;DP=3811;DP4=1687,1870,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000262398;MQB=1.58614e-08;MQSB=1.94043e-08;RPB=0.93;SGB=72.0322;VDB=0.0744328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.7:15905927 chr07:015905927 0 W/15905927-15905927 FN3512-S SNP T -> C AC=1;AN=188;BQB=0.998988;DP=3996;DP4=1071,2786,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.4629e-13;MQSB=0.992278;RPB=0.62327;SGB=98.9552;VDB=0.988596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.7:15908065 chr07:015908065 0 W/15908065-15908065 FN1724-S SNP C -> G AC=2;AN=188;BQB=0.474576;DP=1799;DP4=916,842,4,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.1287e-06;MQSB=0.833703;RPB=0.604021;SGB=39.8925;VDB=0.699731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R394G|637|LOC_Os07g27340|protein_coding|CODING|LOC_Os07g27340.1|1|1) FN2301.SNP.7:15911363 chr07:015911363 0 W/15911363-15911363 FN2301 SNP T -> C AC=1;AN=192;BQB=0.0272642;DP=4848;DP4=2318,2007,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.56861e-07;MQSB=0.513782;RPB=0.525412;SGB=-64.5008;VDB=0.979525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.7:15914161 chr07:015914161 0 W/15914161-15914161 FN1531-S Single Base Substitution G-T INTRON Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN-215.SNP.7:15924348 chr07:015924348 0 W/15924348-15924348 FN-215 Single Base Substitution G-A INTRON HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3310-S.SNP.7:15925622 chr07:015925622 0 W/15925622-15925622 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.999477;DP=2960;DP4=1187,1679,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43945e-11;MQSB=0.98674;RPB=0.268357;SGB=93.9603;VDB=0.435049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G40E|103|LOC_Os07g27359|protein_coding|CODING|LOC_Os07g27359.1|1|1) FN4129-S.SNP.7:15935281 chr07:015935281 0 W/15935281-15935281 FN4129-S SNP C -> T AC=2;AN=182;BQB=0.999981;DP=2801;DP4=1259,1429,15,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.45133e-16;MQSB=0.711628;RPB=0.339718;SGB=88.2906;VDB=0.659057;EFF=INTRON(MODIFIER||||61|LOC_Os07g27380|protein_coding|CODING|LOC_Os07g27380.1|2|1) FN2664-S.SNP.7:15938532 chr07:015938532 0 W/15938532-15938532 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.3217;DP=4977;DP4=2179,2460,13,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00321479;MQB=1.04556e-18;MQSB=0.999932;RPB=0.578001;SGB=146.368;VDB=0.764771;EFF=UTR_3_PRIME(MODIFIER||451||103|LOC_Os07g27390|protein_coding|CODING|LOC_Os07g27390.1|1|1) FN-408.SNP.7:15942843 chr07:015942843 0 W/15942843-15942843 FN-408 Single Base Substitution C-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN551-S.SNP.7:15943965 chr07:015943965 0 W/15943965-15943965 FN551-S Single Base Substitution G-A INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN-361.SNP.7:15944510 chr07:015944510 0 W/15944510-15944510 FN-361 Single Base Substitution T-G INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN1557-S.SNP.7:15948286 chr07:015948286 0 W/15948286-15948286 FN1557-S Single Base Substitution C-T INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3758-S.SNP.7:15948286 chr07:015948286 0 W/15948286-15948286 FN3758-S SNP C -> T AC=2;AN=190;BQB=0.536345;DP=2872;DP4=1132,1591,17,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.24676e-11;MQSB=0.998768;RPB=0.94081;SGB=108.296;VDB=0.325601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.7:15948398 chr07:015948398 0 W/15948398-15948398 FN4160-S SNP A -> G AC=1;AN=170;BQB=0.999977;DP=2544;DP4=1278,1156,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.99243e-09;MQSB=0.70879;RPB=0.933148;SGB=19.8839;VDB=0.676559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.7:15956030 chr07:015956030 0 W/15956030-15956030 FN1514-S Single Base Substitution A-G INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1062-S.SNP.7:15958490 chr07:015958490 0 W/15958490-15958490 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2271-S.SNP.7:15963790 chr07:015963790 0 W/15963790-15963790 FN2271-S SNP C -> T AC=2;AN=190;BQB=0.76554;DP=3942;DP4=1608,1975,19,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000253678;MQB=2.16117e-18;MQSB=0.337975;RPB=0.2766;SGB=128.501;VDB=0.799499;EFF=INTRON(MODIFIER||||109|LOC_Os07g27400|protein_coding|CODING|LOC_Os07g27400.1|1|1) FN2097-S.SNP.7:15968900 chr07:015968900 0 W/15968900-15968900 FN2097-S SNP C -> T AC=1;AN=168;BQB=0.773071;DP=4028;DP4=1929,2054,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.72696e-12;MQSB=0.954624;RPB=0.957239;SGB=39.2004;VDB=0.224584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.7:15969326 chr07:015969326 0 W/15969326-15969326 FN3951-S SNP G -> C AC=1;AN=168;BQB=0.496741;DP=1498;DP4=842,501,5,2;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000735536;MQSB=0.0757028;RPB=0.855395;SGB=25.5891;VDB=0.925297;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.7:15972495 chr07:015972495 0 W/15972495-15972495 FN-305 Single Base Substitution C-A INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3653-S.SNP.7:15975691 chr07:015975691 0 W/15975691-15975691 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.949176;DP=2829;DP4=1316,1440,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58837e-05;MQSB=0.882018;RPB=0.880033;SGB=30.8803;VDB=0.251998;EFF=SPLICE_SITE_REGION(LOW||||1606|LOC_Os07g27420|protein_coding|CODING|LOC_Os07g27420.1|3|1),INTRON(MODIFIER||||1606|LOC_Os07g27420|protein_coding|CODING|LOC_Os07g27420.1|3|1) FN1153-S.SNP.7:15976466 chr07:015976466 0 W/15976466-15976466 FN1153-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g27420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1435-S.SNP.7:15976466 chr07:015976466 0 W/15976466-15976466 FN1435-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g27420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN590-S.SNP.7:15976466 chr07:015976466 0 W/15976466-15976466 FN590-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g27420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN2086-S.SNP.7:15977629 chr07:015977629 0 W/15977629-15977629 FN2086-S SNP G -> A AC=2;AN=168;BQB=0.599681;DP=3403;DP4=1664,1655,27,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.42295e-32;MQSB=0.984891;RPB=0.989003;SGB=127.059;VDB=0.22948;EFF=INTRON(MODIFIER||||1606|LOC_Os07g27420|protein_coding|CODING|LOC_Os07g27420.1|5|1) FN540-S.SNP.7:15980879 chr07:015980879 0 W/15980879-15980879 FN540-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g27420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN3369-S.SNP.7:15982976 chr07:015982976 0 W/15982976-15982976 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.650524;DP=3881;DP4=1717,2020,18,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.72829e-15;MQSB=0.940474;RPB=0.979125;SGB=139.178;VDB=0.958391;EFF=INTRON(MODIFIER||||165|LOC_Os07g27430|protein_coding|CODING|LOC_Os07g27430.1|1|1) FN525-S.SNP.7:15987347 chr07:015987347 0 W/15987347-15987347 FN525-S Single Base Substitution G-A INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2361.SNP.7:15992406 chr07:015992406 0 W/15992406-15992406 FN2361 SNP A -> G AC=1;AN=192;BQB=0.992943;DP=5059;DP4=2156,2590,12,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.8368e-16;MQSB=0.658995;RPB=0.997506;SGB=27.6913;VDB=0.959961;EFF=INTRON(MODIFIER||||166|LOC_Os07g27450|protein_coding|CODING|LOC_Os07g27450.1|1|1) FN1332-S.SNP.7:15996693 chr07:015996693 0 W/15996693-15996693 FN1332-S Single Base Substitution G-C INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2734-S.SNP.7:16004526 chr07:016004526 0 W/16004526-16004526 FN2734-S SNP C -> T AC=1;AN=200;BQB=0.873756;DP=4861;DP4=2258,2360,3,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205719;MQB=5.40101e-08;MQSB=0.923051;RPB=0.520954;SGB=43.8747;VDB=0.815422;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.7:16008329 chr07:016008329 0 W/16008329-16008329 FN1184-S Single Base Substitution T-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1319-S.SNP.7:16009024 chr07:016009024 0 W/16009024-16009024 FN1319-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN577-S.SNP.7:16011360 chr07:016011360 0 W/16011360-16011360 FN577-S Single Base Substitution C-T INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3438-S.SNP.7:16016999 chr07:016016999 0 W/16016999-16016999 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.886357;DP=2680;DP4=1246,1350,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.41889e-07;MQSB=0.951378;RPB=0.948599;SGB=25.1826;VDB=0.748814;EFF=INTRON(MODIFIER||||722|LOC_Os07g27480|protein_coding|CODING|LOC_Os07g27480.1|9|1) FN487-S.SNP.7:16019292 chr07:016019292 0 W/16019292-16019292 FN487-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g27480 ELMO/CED-12 family protein, putative, expressed SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2213-S.SNP.7:16026032 chr07:016026032 0 W/16026032-16026032 FN2213-S SNP T -> A AC=1;AN=190;BQB=0.000513935;DP=5366;DP4=2712,2198,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.56388e-09;MQSB=0.954127;RPB=0.629977;SGB=41.5369;VDB=0.441129;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.7:16030255 chr07:016030255 0 W/16030255-16030255 FN1023-S Single Base Substitution C-G INTRON HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3753-S.SNP.7:16033997 chr07:016033997 0 W/16033997-16033997 FN3753-S SNP C -> A AC=1;AN=190;BQB=0.116313;DP=2786;DP4=1291,1400,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61486e-08;MQSB=0.989198;RPB=0.988798;SGB=36.4291;VDB=0.824688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.7:16035335 chr07:016035335 0 W/16035335-16035335 FN1209-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN405-S.SNP.7:16039384 chr07:016039384 0 W/16039384-16039384 FN405-S Single Base Substitution T-G INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN415-S.SNP.7:16047141 chr07:016047141 0 W/16047141-16047141 FN415-S Single Base Substitution G-A INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1027-S.SNP.7:16052374 chr07:016052374 0 W/16052374-16052374 FN1027-S Single Base Substitution C-T INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3358-S.SNP.7:16062293 chr07:016062293 0 W/16062293-16062293 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.969544;DP=2754;DP4=1334,1294,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.29925e-08;MQSB=0.99215;RPB=0.748953;SGB=20.7533;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.7:16065069 chr07:016065069 0 W/16065069-16065069 FN1315-S Single Base Substitution G-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1688-S.SNP.7:16118449 chr07:016118449 0 W/16118449-16118449 FN1688-S SNP G -> A AC=2;AN=188;BQB=0.997817;DP=3217;DP4=1850,1312,13,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.09393e-13;MQSB=0.925486;RPB=0.844872;SGB=51.5091;VDB=0.229505;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.7:16119051 chr07:016119051 0 W/16119051-16119051 FN4172-S SNP A -> T AC=1;AN=170;BQB=0.9732;DP=2252;DP4=1035,1154,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.43958e-09;MQSB=0.805531;RPB=0.861395;SGB=56.7575;VDB=0.773413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.7:16120396 chr07:016120396 0 W/16120396-16120396 FN-198 Single Base Substitution G-T INTERGENIC HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN411-S.SNP.7:16120946 chr07:016120946 0 W/16120946-16120946 FN411-S Single Base Substitution T-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN852-S.SNP.7:16123567 chr07:016123567 0 W/16123567-16123567 FN852-S Single Base Substitution G-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3938-S.SNP.7:16128465 chr07:016128465 0 W/16128465-16128465 FN3938-S SNP A -> G AC=1;AN=158;BQB=0.793901;DP=2681;DP4=1169,1430,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.78126e-05;MQSB=0.9608;RPB=0.862418;SGB=11.9715;VDB=0.119057;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.7:16129706 chr07:016129706 0 W/16129706-16129706 FN1458-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g27610 expressed protein SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-166.SNP.7:16132610 chr07:016132610 0 W/16132610-16132610 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN378-S.SNP.7:16132711 chr07:016132711 0 W/16132711-16132711 FN378-S Single Base Substitution C-T INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN2765-S.SNP.7:16135349 chr07:016135349 0 W/16135349-16135349 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.978187;DP=3385;DP4=1555,1587,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.65023e-13;MQSB=0.699943;RPB=0.125463;SGB=90.9049;VDB=0.0280854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S39R|181|LOC_Os07g27630|protein_coding|CODING|LOC_Os07g27630.1|1|1) FN-394.SNP.7:16140186 chr07:016140186 0 W/16140186-16140186 FN-394 Single Base Substitution T-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1458-S.SNP.7:16143620 chr07:016143620 0 W/16143620-16143620 FN1458-S Single Base Substitution C-T INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2203-S.SNP.7:16145112 chr07:016145112 0 W/16145112-16145112 FN2203-S SNP G -> A AC=2;AN=190;BQB=0.6747;DP=4483;DP4=1994,2126,23,45;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.00531e-29;MQSB=0.810389;RPB=0.152311;SGB=182.94;VDB=0.113083;EFF=INTERGENIC(MODIFIER||||||||||1) FN960-S.SNP.7:16149679 chr07:016149679 0 W/16149679-16149679 FN960-S Single Base Substitution G-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1036-S.SNP.7:16151091 chr07:016151091 0 W/16151091-16151091 FN1036-S Single Base Substitution G-A INTRON HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1483-S.SNP.7:16158390 chr07:016158390 0 W/16158390-16158390 FN1483-S Single Base Substitution A-G INTRON HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN4161-S.SNP.7:16159189 chr07:016159189 0 W/16159189-16159189 FN4161-S SNP G -> C AC=1;AN=170;BQB=0.969627;DP=2397;DP4=1132,1194,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.08677e-08;MQSB=0.978965;RPB=0.985486;SGB=56.7575;VDB=0.406196;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E496Q|539|LOC_Os07g27690|protein_coding|CODING|LOC_Os07g27690.1|10|1) FN-67.SNP.7:16159695 chr07:016159695 0 W/16159695-16159695 FN-67 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g27700 retrotransposon protein, putative, unclassified, expressed SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2386.SNP.7:16160806 chr07:016160806 0 W/16160806-16160806 FN2386 SNP G -> A AC=1;AN=192;BQB=0.9873;DP=4573;DP4=2341,1939,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.27731e-08;MQSB=0.864247;RPB=0.292033;SGB=62.9035;VDB=0.516194;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P186|574|LOC_Os07g27700|protein_coding|CODING|LOC_Os07g27700.1|3|1) FN-265.SNP.7:16163975 chr07:016163975 0 W/16163975-16163975 FN-265 Single Base Substitution C-G INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2337.SNP.7:16167087 chr07:016167087 0 W/16167087-16167087 FN2337 SNP G -> A AC=2;AN=192;BQB=0.944395;DP=4879;DP4=2502,2111,14,20;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=1.27665e-12;MQSB=0.0113611;RPB=0.92002;SGB=149.626;VDB=0.205263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.7:16170063 chr07:016170063 0 W/16170063-16170063 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.979875;DP=4386;DP4=2063,2080,5,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.46041e-11;MQSB=0.873804;RPB=0.160651;SGB=51.0851;VDB=0.176723;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P229|1005|LOC_Os07g27720|protein_coding|CODING|LOC_Os07g27720.1|2|1) FN465-S.SNP.7:16173579 chr07:016173579 0 W/16173579-16173579 FN465-S Single Base Substitution G-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN764-S.SNP.7:16179008 chr07:016179008 0 W/16179008-16179008 FN764-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g27730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2149-S.SNP.7:16188396 chr07:016188396 0 W/16188396-16188396 FN2149-S SNP C -> A AC=1;AN=168;BQB=0.0472294;DP=2432;DP4=1238,1012,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.000332097;MQSB=0.999969;RPB=0.923674;SGB=-98.0622;VDB=0.175798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.7:16190470 chr07:016190470 0 W/16190470-16190470 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.885771;DP=2976;DP4=1668,1255,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=8.69128e-07;MQSB=0.0221708;RPB=0.714496;SGB=-13.6493;VDB=0.931524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.7:16194484 chr07:016194484 0 W/16194484-16194484 FN1526-S Single Base Substitution A-G INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN4260-S.SNP.7:16203887 chr07:016203887 0 W/16203887-16203887 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.909458;DP=2336;DP4=1071,1199,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04519e-05;MQSB=0.912047;RPB=0.954209;SGB=38.987;VDB=0.828364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E60K|353|LOC_Os07g27760|protein_coding|CODING|LOC_Os07g27760.4|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E60K|843|LOC_Os07g27760|protein_coding|CODING|LOC_Os07g27760.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E60K|368|LOC_Os07g27760|protein_coding|CODING|LOC_Os07g27760.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E60K|353|LOC_Os07g27760|protein_coding|CODING|LOC_Os07g27760.3|2|1) FN1453-S.SNP.7:16206027 chr07:016206027 0 W/16206027-16206027 FN1453-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2310.SNP.7:16207228 chr07:016207228 0 W/16207228-16207228 FN2310 SNP C -> T AC=1;AN=192;BQB=0.589982;DP=5343;DP4=2713,2270,6,14;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.086094;MQB=0.682473;MQSB=0;RPB=0.112816;SGB=61.1661;VDB=0.174911;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L19F|644|LOC_Os07g27770|protein_coding|CODING|LOC_Os07g27770.1|1|1) FN979-S.SNP.7:16207367 chr07:016207367 0 W/16207367-16207367 FN979-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g27770 transposon protein, putative, unclassified, expressed SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2557-S.SNP.7:16212133 chr07:016212133 0 W/16212133-16212133 FN2557-S SNP G -> A AC=1;AN=198;BQB=0.695747;DP=4106;DP4=1831,2056,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00114094;MQSB=0.885711;RPB=0.851167;SGB=35.7638;VDB=0.603916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.7:16221643 chr07:016221643 0 W/16221643-16221643 FN3853-S SNP T -> C AC=1;AN=158;BQB=0.96027;DP=2490;DP4=1118,1209,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.183936;MQB=0.853174;MQSB=0;RPB=0.999712;SGB=37.4429;VDB=0.131699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F500L|720|LOC_Os07g27800|protein_coding|CODING|LOC_Os07g27800.1|2|1) FN2408.SNP.7:16230505 chr07:016230505 0 W/16230505-16230505 FN2408 SNP A -> T AC=1;AN=200;BQB=0.553591;DP=2753;DP4=1259,783,13,2;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000184568;MQSB=0.000751751;RPB=0.555693;SGB=4.67442;VDB=0.664634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I16N|185|LOC_Os07g27810|protein_coding|CODING|LOC_Os07g27810.1|1|1) FN1645-S.SNP.7:16243224 chr07:016243224 0 W/16243224-16243224 FN1645-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1619-S.SNP.7:16253726 chr07:016253726 0 W/16253726-16253726 FN1619-S Single Base Substitution T-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3343-S.SNP.7:16262504 chr07:016262504 0 W/16262504-16262504 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.833098;DP=3039;DP4=1526,1405,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.63212e-06;MQSB=0.99305;RPB=0.147629;SGB=53.2642;VDB=0.514339;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.7:16263373 chr07:016263373 0 W/16263373-16263373 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.29786;DP=4865;DP4=2461,2047,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26794e-10;MQSB=0.646168;RPB=0.767652;SGB=77.2904;VDB=0.92023;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T66|175|LOC_Os07g27860|protein_coding|CODING|LOC_Os07g27860.1|1|1) FN1133-S.SNP.7:16266089 chr07:016266089 0 W/16266089-16266089 FN1133-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1073-S.SNP.7:16266739 chr07:016266739 0 W/16266739-16266739 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN4181-S.SNP.7:16269579 chr07:016269579 0 W/16269579-16269579 FN4181-S SNP A -> G AC=1;AN=170;BQB=0.972839;DP=2468;DP4=1209,1130,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.76594e-09;MQSB=0.995275;RPB=0.981851;SGB=74.528;VDB=0.702467;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.7:16271383 chr07:016271383 0 W/16271383-16271383 FN3713-S SNP G -> A AC=1;AN=190;BQB=0.493927;DP=3339;DP4=1510,1627,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.09002e-08;MQSB=0.83555;RPB=0.597113;SGB=5.66499;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.7:16272047 chr07:016272047 0 W/16272047-16272047 FN4166-S SNP T -> G AC=1;AN=170;BQB=0.867682;DP=2550;DP4=1279,1206,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2513e-08;MQSB=0.99962;RPB=0.220871;SGB=41.7633;VDB=0.00583113;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.7:16280609 chr07:016280609 0 W/16280609-16280609 FN2085-S SNP C -> G AC=1;AN=168;BQB=0.643174;DP=3804;DP4=1737,1965,53,23;HOB=7.08617e-05;ICB=0.000142567;MQ=22;MQ0F=0.254995;MQB=5.11757e-06;MQSB=0.641793;RPB=0.00111531;SGB=-1102.35;VDB=0.194374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P349R|607|LOC_Os07g27900|protein_coding|CODING|LOC_Os07g27900.1|5|1) FN-108.SNP.7:16285944 chr07:016285944 0 W/16285944-16285944 FN-108 Single Base Substitution T-C INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3861-S.SNP.7:16288553 chr07:016288553 0 W/16288553-16288553 FN3861-S SNP C -> T AC=1;AN=158;BQB=0.998331;DP=3029;DP4=1517,1384,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65495e-08;MQSB=0.976641;RPB=0.368282;SGB=60.1755;VDB=0.833309;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.7:16290362 chr07:016290362 0 W/16290362-16290362 FN-207 Single Base Substitution C-T INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN-207.SNP.7:16290363 chr07:016290363 0 W/16290363-16290363 FN-207 Single Base Substitution T-G INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN230-S.SNP.7:16300863 chr07:016300863 0 W/16300863-16300863 FN230-S Single Base Substitution G-A INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN626-S.SNP.7:16310854 chr07:016310854 0 W/16310854-16310854 FN626-S Single Base Substitution C-T INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2257-S.SNP.7:16312606 chr07:016312606 0 W/16312606-16312606 FN2257-S SNP T -> C AC=2;AN=190;BQB=0.437351;DP=4738;DP4=1947,2203,12,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.09109e-15;MQSB=0.87519;RPB=0.483313;SGB=-6.57546;VDB=0.0372397;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.7:16316990 chr07:016316990 0 W/16316990-16316990 FN772-S Single Base Substitution A-G INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN696-S.SNP.7:16319716 chr07:016319716 0 W/16319716-16319716 FN696-S Single Base Substitution A-T INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2797-S.SNP.7:16322662 chr07:016322662 0 W/16322662-16322662 FN2797-S SNP T -> A AC=1;AN=198;BQB=0.0638162;DP=4489;DP4=1968,2105,17,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000222767;MQB=5.74845e-16;MQSB=0.866765;RPB=0.373544;SGB=109.285;VDB=0.307432;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.7:16324074 chr07:016324074 0 W/16324074-16324074 W426-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3855-S.SNP.7:16324490 chr07:016324490 0 W/16324490-16324490 FN3855-S SNP A -> T AC=1;AN=158;BQB=0.713972;DP=2208;DP4=1049,1067,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.11959e-10;MQSB=0.274181;RPB=0.599962;SGB=33.2965;VDB=0.882069;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.7:16325894 chr07:016325894 0 W/16325894-16325894 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.673895;DP=2724;DP4=1312,1232,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.67094e-07;MQSB=0.983561;RPB=0.939255;SGB=-16.5452;VDB=0.940966;EFF=INTRON(MODIFIER||||244|LOC_Os07g27980|protein_coding|CODING|LOC_Os07g27980.1|2|1) FN4155-S.SNP.7:16325920 chr07:016325920 0 W/16325920-16325920 FN4155-S SNP C -> A AC=1;AN=170;BQB=0.992829;DP=2436;DP4=1287,1072,6,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.65984e-11;MQSB=0.999998;RPB=0.812632;SGB=83.4133;VDB=0.387349;EFF=INTRON(MODIFIER||||244|LOC_Os07g27980|protein_coding|CODING|LOC_Os07g27980.1|2|1) FN418-S.SNP.7:16327858 chr07:016327858 0 W/16327858-16327858 FN418-S Single Base Substitution C-T INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2653-S.SNP.7:16329976 chr07:016329976 0 W/16329976-16329976 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.359771;DP=5142;DP4=2343,2546,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3645e-08;MQSB=0.988398;RPB=0.828341;SGB=49.6594;VDB=0.148495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.7:16329977 chr07:016329977 0 W/16329977-16329977 FN2653-S SNP T -> A AC=1;AN=200;BQB=0.769883;DP=5131;DP4=2326,2517,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64525e-07;MQSB=0.949717;RPB=0.826825;SGB=21.6694;VDB=0.154006;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.7:16336404 chr07:016336404 0 W/16336404-16336404 FN-65 Single Base Substitution T-C INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN4314-S.SNP.7:16344697 chr07:016344697 0 W/16344697-16344697 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.72218;DP=1895;DP4=966,786,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000527704;MQB=1.00751e-05;MQSB=0.680055;RPB=0.690522;SGB=12.556;VDB=0.280152;EFF=INTRON(MODIFIER||||368|LOC_Os07g28030|protein_coding|CODING|LOC_Os07g28030.1|1|1) FN4314-S.SNP.7:16344701 chr07:016344701 0 W/16344701-16344701 FN4314-S SNP A -> G AC=1;AN=170;BQB=0.815704;DP=1913;DP4=1013,799,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000522739;MQB=6.14844e-05;MQSB=0.563704;RPB=0.59397;SGB=24.5502;VDB=0.272308;EFF=INTRON(MODIFIER||||368|LOC_Os07g28030|protein_coding|CODING|LOC_Os07g28030.1|1|1) FN4100-S.SNP.7:16350253 chr07:016350253 0 W/16350253-16350253 FN4100-S SNP C -> A AC=1;AN=182;BQB=0.960839;DP=2841;DP4=1217,1552,13,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.72808e-14;MQSB=0.789424;RPB=0.999999;SGB=89.2199;VDB=0.979252;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.7:16350254 chr07:016350254 0 W/16350254-16350254 FN4100-S SNP A -> T AC=1;AN=182;BQB=0.842036;DP=2848;DP4=1219,1512,14,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.72999e-14;MQSB=0.758844;RPB=0.979703;SGB=93.7308;VDB=0.982988;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.7:16353398 chr07:016353398 0 W/16353398-16353398 FN-311 Single Base Substitution A-G INTRON HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3310-S.SNP.7:16355650 chr07:016355650 0 W/16355650-16355650 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.164783;DP=3296;DP4=1530,1670,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00273058;MQB=1.78229e-07;MQSB=0.000806357;RPB=0.817021;SGB=38.4058;VDB=0.733669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A952T|1140|LOC_Os07g28050|protein_coding|CODING|LOC_Os07g28050.1|13|1) FN2378.SNP.7:16359730 chr07:016359730 0 W/16359730-16359730 FN2378 SNP A -> G AC=2;AN=192;BQB=0.173764;DP=4898;DP4=2603,1909,36,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.02628e-35;MQSB=0.956813;RPB=0.971683;SGB=-133.412;VDB=0.767049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F155L|1140|LOC_Os07g28050|protein_coding|CODING|LOC_Os07g28050.1|7|1) FN4202-S.SNP.7:16364611 chr07:016364611 0 W/16364611-16364611 FN4202-S SNP C -> A AC=1;AN=170;BQB=0.950674;DP=2423;DP4=1188,1183,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.42881e-08;MQSB=0.909448;RPB=0.731234;SGB=61.2001;VDB=0.157894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.7:16365985 chr07:016365985 0 W/16365985-16365985 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.805034;DP=1784;DP4=395,1311,1,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.3442e-05;MQSB=0.000137995;RPB=0.799674;SGB=44.5415;VDB=0.0207942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.7:16366919 chr07:016366919 0 W/16366919-16366919 FN2259-S SNP A -> G AC=2;AN=190;BQB=0.427294;DP=4119;DP4=2150,1710,17,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.84939e-19;MQSB=0.995971;RPB=0.122819;SGB=-6.02158;VDB=0.502909;EFF=INTERGENIC(MODIFIER||||||||||1) FN-275.SNP.7:16371935 chr07:016371935 0 W/16371935-16371935 FN-275 Single Base Substitution C-T INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2581-S.SNP.7:16372124 chr07:016372124 0 W/16372124-16372124 FN2581-S SNP A -> T AC=1;AN=198;BQB=0.927723;DP=3618;DP4=1604,1671,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16357e-06;MQSB=0.849601;RPB=0.782662;SGB=25.7687;VDB=0.294276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E53V|233|LOC_Os07g28070|protein_coding|CODING|LOC_Os07g28070.1|1|1) FN3558-S.SNP.7:16374441 chr07:016374441 0 W/16374441-16374441 FN3558-S SNP A -> C AC=2;AN=188;BQB=0.976582;DP=2740;DP4=1366,1280,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.8961e-15;MQSB=0.998981;RPB=0.943912;SGB=108.042;VDB=0.811018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.7:16387866 chr07:016387866 0 W/16387866-16387866 FN2387 SNP G -> A AC=1;AN=192;BQB=0.996756;DP=5088;DP4=2417,2325,19,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.02651e-24;MQSB=0.969605;RPB=0.966084;SGB=-142.209;VDB=0.350739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.7:16390688 chr07:016390688 0 W/16390688-16390688 FN1414-S Single Base Substitution A-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2649-S.SNP.7:16393472 chr07:016393472 0 W/16393472-16393472 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.992217;DP=4648;DP4=1890,2310,4,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.34857e-11;MQSB=0.121377;RPB=0.575153;SGB=54.6902;VDB=0.67978;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.7:16396100 chr07:016396100 0 W/16396100-16396100 FN521-S Single Base Substitution T-A INTERGENIC HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2361.SNP.7:16398597 chr07:016398597 0 W/16398597-16398597 FN2361 SNP C -> T AC=1;AN=192;BQB=0.977003;DP=5145;DP4=2425,2427,19,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.25549e-21;MQSB=0.999812;RPB=0.911756;SGB=38.6418;VDB=0.440267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.7:16400162 chr07:016400162 0 W/16400162-16400162 FN2121-S SNP A -> G AC=1;AN=168;BQB=0.00347493;DP=2733;DP4=1382,1282,7,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.37527e-05;MQSB=0.885947;RPB=0.900682;SGB=-177.768;VDB=0.0735511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S231P|454|LOC_Os07g28120|protein_coding|CODING|LOC_Os07g28120.1|3|1) FN3487-S.SNP.7:16405781 chr07:016405781 0 W/16405781-16405781 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.933517;DP=2543;DP4=1163,1262,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20124e-05;MQSB=0.924817;RPB=0.560073;SGB=39.699;VDB=0.755657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.7:16411541 chr07:016411541 0 W/16411541-16411541 FN3528-S SNP T -> A AC=2;AN=188;BQB=0.907243;DP=3651;DP4=1748,1614,35,34;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.28113e-33;MQSB=0.982275;RPB=0.917575;SGB=224.347;VDB=0.535976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.7:16411758 chr07:016411758 0 W/16411758-16411758 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.68565;DP=4977;DP4=2515,2229,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1196e-14;MQSB=0.915195;RPB=0.395472;SGB=76.3213;VDB=0.451506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.7:16418584 chr07:016418584 0 W/16418584-16418584 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.355989;DP=4018;DP4=1858,1954,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.70937e-09;MQSB=0.943194;RPB=0.991975;SGB=67.9293;VDB=0.429885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.7:16429846 chr07:016429846 0 W/16429846-16429846 FN3940-S SNP G -> T AC=2;AN=158;BQB=0.871488;DP=2236;DP4=1079,1046,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.15416e-15;MQSB=0.948746;RPB=0.624104;SGB=77.8763;VDB=0.193521;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.7:16430300 chr07:016430300 0 W/16430300-16430300 FN-126 Single Base Substitution T-C INTERGENIC HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN4036-S.SNP.7:16432755 chr07:016432755 0 W/16432755-16432755 FN4036-S SNP G -> A AC=1;AN=168;BQB=0.993433;DP=2459;DP4=970,1374,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0776e-09;MQSB=0.990249;RPB=0.640412;SGB=69.8961;VDB=0.913921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.7:16433170 chr07:016433170 0 W/16433170-16433170 FN1550-S Single Base Substitution A-C INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2403.SNP.7:16443048 chr07:016443048 0 W/16443048-16443048 FN2403 SNP A -> G AC=1;AN=200;BQB=0.442016;DP=4078;DP4=1742,1888,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000245218;MQB=2.16463e-12;MQSB=0.998197;RPB=0.99725;SGB=-69.4692;VDB=0.833635;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.7:16443538 chr07:016443538 0 W/16443538-16443538 FN1443-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3632-S.SNP.7:16443538 chr07:016443538 0 W/16443538-16443538 FN3632-S SNP G -> C AC=2;AN=190;BQB=0.659816;DP=2859;DP4=1202,1537,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.40122e-17;MQSB=0.953996;RPB=0.973516;SGB=121.957;VDB=0.560696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.7:16443538 chr07:016443538 0 W/16443538-16443538 FN3817-S SNP G -> C AC=2;AN=190;BQB=0.994265;DP=3288;DP4=1186,2008,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.17374e-12;MQSB=0.817133;RPB=0.260493;SGB=68.0854;VDB=0.0871547;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.7:16443538 chr07:016443538 0 W/16443538-16443538 FN4126-S SNP G -> C AC=2;AN=180;BQB=0.99607;DP=3197;DP4=1254,1873,10,14;HOB=0.0219753;ICB=0.494507;MQ=49;MQ0F=0;MQB=1.08652e-13;MQSB=0.999725;RPB=0.750228;SGB=102.753;VDB=0.617481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.7:16444807 chr07:016444807 0 W/16444807-16444807 FN3865-S SNP G -> T AC=2;AN=158;BQB=0.981809;DP=2392;DP4=1154,1124,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.56326e-15;MQSB=0.997454;RPB=0.692828;SGB=84.6152;VDB=0.664755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.7:16445403 chr07:016445403 0 W/16445403-16445403 FN2663-S SNP C -> T AC=2;AN=200;BQB=0.847927;DP=5240;DP4=2480,2417,29,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.21989e-33;MQSB=0.852101;RPB=0.848335;SGB=72.0916;VDB=0.972886;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.7:16449294 chr07:016449294 0 W/16449294-16449294 FN833-S Single Base Substitution G-T INTRON HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1268-S.SNP.7:16453563 chr07:016453563 0 W/16453563-16453563 FN1268-S Single Base Substitution C-T INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN4183-S.SNP.7:16455513 chr07:016455513 0 W/16455513-16455513 FN4183-S SNP A -> T AC=1;AN=170;BQB=0.955448;DP=2304;DP4=1142,1056,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.94494e-06;MQSB=0.824685;RPB=0.532766;SGB=34.5445;VDB=0.0412858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.7:16458020 chr07:016458020 0 W/16458020-16458020 FN2671-S SNP G -> T AC=1;AN=200;BQB=0.612765;DP=4701;DP4=2183,2195,7,51;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00744522;MQB=1.33363e-36;MQSB=0.458596;RPB=1.15322e-13;SGB=-1741.71;VDB=4.06765e-19;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.7:16458710 chr07:016458710 0 W/16458710-16458710 FN1009-S Single Base Substitution T-A INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3628-S.SNP.7:16462124 chr07:016462124 0 W/16462124-16462124 FN3628-S SNP T -> C AC=1;AN=190;BQB=0.323406;DP=2999;DP4=1615,1135,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0566856;MQB=0.284417;MQSB=5.43114e-10;RPB=0.989264;SGB=-35.4322;VDB=0.876905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:16465124 chr07:016465124 0 W/16465124-16465124 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.973507;DP=4771;DP4=2270,2244,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0012576;MQB=2.5251e-16;MQSB=0.809488;RPB=0.733759;SGB=90.7419;VDB=0.892075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1440L|1633|LOC_Os07g28200|protein_coding|CODING|LOC_Os07g28200.1|7|1) FN-141.SNP.7:16466796 chr07:016466796 0 W/16466796-16466796 FN-141 Single Base Substitution G-A INTRON HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN4081-S.SNP.7:16471381 chr07:016471381 0 W/16471381-16471381 FN4081-S SNP C -> G AC=1;AN=180;BQB=0.932175;DP=3040;DP4=1429,1539,6,16;HOB=6.17284e-05;ICB=0.000124143;MQ=48;MQ0F=0.00230263;MQB=2.19677e-11;MQSB=0.384994;RPB=0.437547;SGB=67.2255;VDB=0.292869;EFF=INTRON(MODIFIER||||1633|LOC_Os07g28200|protein_coding|CODING|LOC_Os07g28200.1|2|1) FN4081-S.SNP.7:16471382 chr07:016471382 0 W/16471382-16471382 FN4081-S SNP C -> A AC=1;AN=180;BQB=0.999872;DP=3050;DP4=1423,1549,5,14;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0.00163934;MQB=7.15122e-11;MQSB=0.306661;RPB=0.609318;SGB=80.1982;VDB=0.470232;EFF=INTRON(MODIFIER||||1633|LOC_Os07g28200|protein_coding|CODING|LOC_Os07g28200.1|2|1) FN1724-S.SNP.7:16483592 chr07:016483592 0 W/16483592-16483592 FN1724-S SNP T -> G AC=1;AN=188;BQB=0.00318773;DP=3446;DP4=2061,1357,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=23;MQ0F=0.322403;MQB=0.755089;MQSB=0;RPB=0.634512;SGB=-81.5271;VDB=0.123095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.7:16487466 chr07:016487466 0 W/16487466-16487466 FN2463 SNP A -> C AC=1;AN=200;BQB=0.618974;DP=4490;DP4=2205,1996,17,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00467706;MQB=3.17322e-10;MQSB=0.0568746;RPB=0.889257;SGB=47.7211;VDB=0.209956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K143Q|663|LOC_Os07g28230|protein_coding|CODING|LOC_Os07g28230.1|2|1) FN4066-S.SNP.7:16495532 chr07:016495532 0 W/16495532-16495532 FN4066-S SNP T -> G AC=1;AN=168;BQB=0.949964;DP=1385;DP4=121,1220,1,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00174138;MQSB=0.69755;RPB=0.342597;SGB=17.5943;VDB=0.329426;EFF=INTRON(MODIFIER||||860|LOC_Os07g28240|protein_coding|CODING|LOC_Os07g28240.1|6|1) FN3918-S.SNP.7:16501624 chr07:016501624 0 W/16501624-16501624 FN3918-S SNP A -> G AC=1;AN=158;BQB=0.962533;DP=2632;DP4=1433,1132,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.6434e-09;MQSB=0.89222;RPB=0.723592;SGB=60.1755;VDB=0.446799;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.7:16502532 chr07:016502532 0 W/16502532-16502532 FN487-S Single Base Substitution A-C INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN3787-S.SNP.7:16510564 chr07:016510564 0 W/16510564-16510564 FN3787-S SNP A -> G AC=1;AN=190;BQB=0.979988;DP=3582;DP4=1812,1658,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17092e-15;MQSB=0.929013;RPB=0.980598;SGB=112.85;VDB=0.508252;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.7:16510750 chr07:016510750 0 W/16510750-16510750 FN654-S Single Base Substitution G-A INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2320.SNP.7:16511254 chr07:016511254 0 W/16511254-16511254 FN2320 SNP T -> C AC=1;AN=192;BQB=0.985657;DP=4791;DP4=2487,1920,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.02755e-08;MQSB=0.779951;RPB=0.640863;SGB=21.2209;VDB=0.897932;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.7:16519537 chr07:016519537 0 W/16519537-16519537 FN-392 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2080-S.SNP.7:16525832 chr07:016525832 0 W/16525832-16525832 FN2080-S SNP T -> C AC=2;AN=168;BQB=0.693781;DP=3360;DP4=1182,2123,19,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.00114e-21;MQSB=0.996842;RPB=0.186748;SGB=-2.87883;VDB=0.327639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.7:16525832 chr07:016525832 0 W/16525832-16525832 FN2729-S SNP T -> C AC=2;AN=200;BQB=0.428439;DP=5264;DP4=2552,2456,25,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81203e-23;MQSB=0.719434;RPB=0.846337;SGB=4.4397;VDB=0.967821;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.7:16528073 chr07:016528073 0 W/16528073-16528073 FN_546-3-1 Single Base Substitution G-T Homo LOC_Os07g28290 hypothetical protein SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1754-S.SNP.7:16535241 chr07:016535241 0 W/16535241-16535241 FN1754-S SNP C -> T AC=1;AN=188;BQB=0.551253;DP=1965;DP4=1013,912,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.25049e-05;MQSB=0.232234;RPB=0.925225;SGB=-17.1729;VDB=0.730534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T96I|132|LOC_Os07g28320|protein_coding|CODING|LOC_Os07g28320.1|1|1) FN-199.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN-199 Single Base Substitution A-T INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-246.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN-246 Single Base Substitution A-T INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-284.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN-284 Single Base Substitution A-T INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN1329-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN1329-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1641-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN1641-S Single Base Substitution A-T INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3371-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN3371-S SNP A -> T AC=2;AN=184;BQB=0.972962;DP=3004;DP4=1507,1416,13,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00565912;MQB=3.06933e-12;MQSB=0.123922;RPB=0.858579;SGB=103.004;VDB=0.367861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN3486-S SNP A -> T AC=1;AN=184;BQB=0.986822;DP=2842;DP4=1480,1284,8,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00281492;MQB=4.8228e-11;MQSB=0.257159;RPB=0.64619;SGB=70.9657;VDB=0.962147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3573-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN3573-S SNP A -> T AC=1;AN=188;BQB=0.908953;DP=2892;DP4=1426,1419,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00449516;MQB=0.000123595;MQSB=0.0176076;RPB=0.983718;SGB=39.8925;VDB=0.57381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.98959;DP=2368;DP4=1192,1112,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00548986;MQB=2.04153e-05;MQSB=0.0160635;RPB=0.906719;SGB=38.3284;VDB=0.0611834;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN3993-S SNP A -> T AC=2;AN=168;BQB=0.951822;DP=2645;DP4=1301,1243,14,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00604915;MQB=8.65762e-13;MQSB=0.0309082;RPB=0.0334792;SGB=79.3486;VDB=0.228289;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN426-S Single Base Substitution A-T INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN915-S.SNP.7:16536956 chr07:016536956 0 W/16536956-16536956 FN915-S Single Base Substitution A-T INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN4046-S.SNP.7:16541140 chr07:016541140 0 W/16541140-16541140 FN4046-S SNP A -> G AC=1;AN=168;BQB=0.858181;DP=2549;DP4=1438,994,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00196155;MQB=7.68586e-05;MQSB=0.824676;RPB=0.97393;SGB=17.3231;VDB=0.0519818;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.7:16545722 chr07:016545722 0 W/16545722-16545722 FN742-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g28340 transposon protein, putative, unclassified, expressed SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN442-S.SNP.7:16548340 chr07:016548340 0 W/16548340-16548340 FN442-S Single Base Substitution G-T INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN-293.SNP.7:16548461 chr07:016548461 0 W/16548461-16548461 FN-293 Single Base Substitution G-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN4177-S.SNP.7:16549376 chr07:016549376 0 W/16549376-16549376 FN4177-S SNP C -> A AC=1;AN=170;BQB=0.952597;DP=2902;DP4=1336,1486,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.99685e-05;MQSB=0.978861;RPB=0.300777;SGB=34.5445;VDB=0.588772;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN-341 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g28350 expressed protein SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2380.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN2380 SNP G -> A AC=1;AN=192;BQB=0.925893;DP=4992;DP4=2484,2281,13,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.41232e-09;MQSB=0.102745;RPB=0.841696;SGB=67.4678;VDB=0.0288461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R52Q|115|LOC_Os07g28350|protein_coding|CODING|LOC_Os07g28350.1|1|1) FN2607-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN2607-S SNP G -> A AC=2;AN=198;BQB=0.521484;DP=3917;DP4=2015,1730,8,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.07701e-08;MQSB=0.759748;RPB=0.760861;SGB=61.7198;VDB=0.317583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R52Q|115|LOC_Os07g28350|protein_coding|CODING|LOC_Os07g28350.1|1|1) FN3095-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.693696;DP=4189;DP4=2076,1982,14,20;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.70503e-14;MQSB=0.477399;RPB=0.629466;SGB=32.6727;VDB=0.548706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R52Q|115|LOC_Os07g28350|protein_coding|CODING|LOC_Os07g28350.1|1|1) FN3901-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN3901-S SNP G -> A AC=2;AN=158;BQB=0.898247;DP=2921;DP4=1395,1419,15,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.95714e-10;MQSB=0.999384;RPB=0.665311;SGB=95.131;VDB=0.197501;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R52Q|115|LOC_Os07g28350|protein_coding|CODING|LOC_Os07g28350.1|1|1) FN4130-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN4130-S SNP G -> A AC=1;AN=182;BQB=0.707253;DP=3296;DP4=1599,1620,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.56922e-08;MQSB=0.999968;RPB=0.911868;SGB=53.182;VDB=0.861718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R52Q|115|LOC_Os07g28350|protein_coding|CODING|LOC_Os07g28350.1|1|1) FN702-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN702-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g28350 expressed protein SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN809-S.SNP.7:16549786 chr07:016549786 0 W/16549786-16549786 FN809-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g28350 expressed protein SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2684-S.SNP.7:16551747 chr07:016551747 0 W/16551747-16551747 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.869488;DP=4470;DP4=2171,2043,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223714;MQB=6.00994e-08;MQSB=0.947151;RPB=0.673191;SGB=21.6694;VDB=0.0370002;EFF=INTRON(MODIFIER||||739|LOC_Os07g28360|protein_coding|CODING|LOC_Os07g28360.1|5|1) FN-274.SNP.7:16554116 chr07:016554116 0 W/16554116-16554116 FN-274 Single Base Substitution C-A INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3391-S.SNP.7:16564266 chr07:016564266 0 W/16564266-16564266 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.498237;DP=3004;DP4=992,1703,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11057e-08;MQSB=0.52631;RPB=0.907562;SGB=6.80232;VDB=0.529987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.7:16575844 chr07:016575844 0 W/16575844-16575844 FN2690-S SNP T -> C AC=1;AN=200;BQB=0.99597;DP=4743;DP4=2203,2202,19,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.81485e-11;MQSB=0.974721;RPB=0.75522;SGB=22.3313;VDB=0.271618;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L677|1794|LOC_Os07g28370|protein_coding|CODING|LOC_Os07g28370.1|3|1) FN1104-S.SNP.7:16576224 chr07:016576224 0 W/16576224-16576224 FN1104-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g28370 retrotransposon protein, putative, unclassified, expressed SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1722-S.SNP.7:16577663 chr07:016577663 0 W/16577663-16577663 FN1722-S SNP A -> C AC=1;AN=188;BQB=0.974963;DP=2858;DP4=1662,1167,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.75864e-10;MQSB=0.978592;RPB=0.999095;SGB=60.7873;VDB=0.47705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1201T|1794|LOC_Os07g28370|protein_coding|CODING|LOC_Os07g28370.1|7|1) FN2147-S.SNP.7:16584438 chr07:016584438 0 W/16584438-16584438 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.386822;DP=3538;DP4=1944,1562,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01508e-08;MQSB=0.996287;RPB=0.999113;SGB=34.748;VDB=0.91697;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.7:16584669 chr07:016584669 0 W/16584669-16584669 FN4090-S SNP C -> T AC=1;AN=178;BQB=0.924289;DP=2839;DP4=1265,1492,9,9;HOB=6.31233e-05;ICB=0.000126956;MQ=49;MQ0F=0;MQB=2.28196e-09;MQSB=0.985829;RPB=0.302716;SGB=53.182;VDB=0.491434;EFF=INTERGENIC(MODIFIER||||||||||1) FN-300.SNP.7:16590362 chr07:016590362 0 W/16590362-16590362 FN-300 Single Base Substitution C-A INTRON HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN1047-S.SNP.7:16590654 chr07:016590654 0 W/16590654-16590654 FN1047-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g28380 retrotransposon protein, putative, unclassified, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN919-S.SNP.7:16599335 chr07:016599335 0 W/16599335-16599335 FN919-S Single Base Substitution A-G INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN4121-S.SNP.7:16601236 chr07:016601236 0 W/16601236-16601236 FN4121-S SNP C -> G AC=1;AN=180;BQB=0.965691;DP=2763;DP4=1410,1273,8,7;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=9.84422e-10;MQSB=0.989103;RPB=0.159733;SGB=62.1548;VDB=0.0728947;EFF=INTRON(MODIFIER||||109|LOC_Os07g28400|protein_coding|CODING|LOC_Os07g28400.1|1|1) FN1624-S.SNP.7:16604359 chr07:016604359 0 W/16604359-16604359 FN1624-S Single Base Substitution C-T INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN517-S.SNP.7:16605400 chr07:016605400 0 W/16605400-16605400 FN517-S Single Base Substitution G-T INTRON HOMO SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3804-S.SNP.7:16610525 chr07:016610525 0 W/16610525-16610525 FN3804-S SNP G -> T AC=1;AN=190;BQB=0.485246;DP=2367;DP4=1072,1212,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.87488e-07;MQSB=0.810144;RPB=0.652382;SGB=32.5467;VDB=0.993317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.7:16615543 chr07:016615543 0 W/16615543-16615543 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.982102;DP=2632;DP4=1265,1285,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.63002e-09;MQSB=0.998378;RPB=0.344017;SGB=57.786;VDB=0.582439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.7:16619100 chr07:016619100 0 W/16619100-16619100 FN1736-S SNP T -> A AC=2;AN=188;BQB=0.988662;DP=4374;DP4=2050,2233,32,24;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=7.34021e-14;MQSB=0.0277962;RPB=0.866324;SGB=-114.344;VDB=6.64126e-06;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.7:16620370 chr07:016620370 0 W/16620370-16620370 FN-227 Single Base Substitution A-T INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN3665-S.SNP.7:16624013 chr07:016624013 0 W/16624013-16624013 FN3665-S SNP G -> T AC=1;AN=190;BQB=0.970831;DP=2518;DP4=1182,1252,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.93666e-11;MQSB=0.994143;RPB=0.996057;SGB=90.0802;VDB=0.254687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q131H|269|LOC_Os07g28430|protein_coding|CODING|LOC_Os07g28430.1|2|1) FN2697-S.SNP.7:16624026 chr07:016624026 0 W/16624026-16624026 FN2697-S SNP C -> A AC=2;AN=200;BQB=0.948582;DP=4921;DP4=2253,2411,20,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90355e-20;MQSB=0.999694;RPB=0.71111;SGB=126.794;VDB=0.919407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Agt|R136S|269|LOC_Os07g28430|protein_coding|CODING|LOC_Os07g28430.1|2|1) FN2419.SNP.7:16635427 chr07:016635427 0 W/16635427-16635427 FN2419 SNP C -> T AC=1;AN=200;BQB=0.990595;DP=5579;DP4=2821,2241,28,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000358487;MQB=3.82236e-24;MQSB=0.919389;RPB=0.138821;SGB=110.245;VDB=0.55679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.7:16635614 chr07:016635614 0 W/16635614-16635614 FN3559-S SNP G -> A AC=1;AN=188;BQB=0.985608;DP=2696;DP4=1248,1358,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.21015e-12;MQSB=0.884156;RPB=0.538852;SGB=80.782;VDB=0.194866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.7:16636548 chr07:016636548 0 W/16636548-16636548 FN1423-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-162.SNP.7:16637049 chr07:016637049 0 W/16637049-16637049 FN-162 Single Base Substitution C-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2082-S.SNP.7:16637703 chr07:016637703 0 W/16637703-16637703 FN2082-S SNP G -> T AC=1;AN=168;BQB=0.138414;DP=3965;DP4=1907,2022,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000252207;MQB=4.06073e-06;MQSB=0.990881;RPB=0.463917;SGB=-108.641;VDB=0.0193982;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.7:16646688 chr07:016646688 0 W/16646688-16646688 FN792-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g28450 retrotransposon protein, putative, unclassified, expressed SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2291.SNP.7:16649794 chr07:016649794 0 W/16649794-16649794 FN2291 SNP C -> T AC=1;AN=192;BQB=0.0926505;DP=4675;DP4=2282,1975,24,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.03941e-18;MQSB=0.57257;RPB=0.606843;SGB=-45.7834;VDB=0.844959;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.7:16650679 chr07:016650679 0 W/16650679-16650679 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.659908;DP=3749;DP4=1868,1713,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.55329e-09;MQSB=0.736475;RPB=0.20632;SGB=40.149;VDB=0.851334;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F26|303|LOC_Os07g28460|protein_coding|CODING|LOC_Os07g28460.1|1|1),START_GAINED(LOW||||183|LOC_Os07g28460|protein_coding|CODING|LOC_Os07g28460.2|1|1),UTR_5_PRIME(MODIFIER||1969||183|LOC_Os07g28460|protein_coding|CODING|LOC_Os07g28460.2|1|1) FN830-S.SNP.7:16656772 chr07:016656772 0 W/16656772-16656772 FN830-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g28460 transposon protein, putative, unclassified, expressed SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN554-S.SNP.7:16673422 chr07:016673422 0 W/16673422-16673422 FN554-S Single Base Substitution G-A INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN765-S.SNP.7:16675960 chr07:016675960 0 W/16675960-16675960 FN765-S Single Base Substitution A-T INTERGENIC HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN4130-S.SNP.7:16676160 chr07:016676160 0 W/16676160-16676160 FN4130-S SNP C -> G AC=1;AN=182;BQB=0.963084;DP=3074;DP4=1358,1644,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.49235e-07;MQSB=0.943943;RPB=0.714036;SGB=18.1224;VDB=0.0396213;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.7:16681631 chr07:016681631 0 W/16681631-16681631 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.574375;DP=3771;DP4=1797,1732,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.60693e-07;MQSB=0.958026;RPB=0.976019;SGB=67.9293;VDB=0.57722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R722K|733|LOC_Os07g28490|protein_coding|CODING|LOC_Os07g28490.1|1|1) FN973-S.SNP.7:16684879 chr07:016684879 0 W/16684879-16684879 FN973-S Single Base Substitution T-A INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN973-S.SNP.7:16684880 chr07:016684880 0 W/16684880-16684880 FN973-S Single Base Substitution C-G INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2533-S.SNP.7:16686661 chr07:016686661 0 W/16686661-16686661 FN2533-S SNP A -> C AC=1;AN=198;BQB=0.861485;DP=4336;DP4=2005,2138,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0369004;MQB=0.0724267;MQSB=0.727947;RPB=0.939318;SGB=40.3588;VDB=0.788314;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aGg|M1125R|1707|LOC_Os07g28510|protein_coding|CODING|LOC_Os07g28510.1|4|1) FN1548-S.SNP.7:16686784 chr07:016686784 0 W/16686784-16686784 FN1548-S SNP T -> C AC=1;AN=188;BQB=0.841348;DP=2607;DP4=1278,1299,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000767165;MQB=0.0458954;MQSB=0.514837;RPB=0.687642;SGB=-13.9132;VDB=0.729745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D1084G|1707|LOC_Os07g28510|protein_coding|CODING|LOC_Os07g28510.1|4|1) FN3613-S.SNP.7:16691728 chr07:016691728 0 W/16691728-16691728 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.999132;DP=2628;DP4=1374,1143,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.312405;MQB=0.0262838;MQSB=0;RPB=0.841794;SGB=85.5263;VDB=0.309311;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.7:16692830 chr07:016692830 0 W/16692830-16692830 FN-196 Single Base Substitution A-G INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1278-S.SNP.7:16695555 chr07:016695555 0 W/16695555-16695555 FN1278-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN4025-S.SNP.7:16697619 chr07:016697619 0 W/16697619-16697619 FN4025-S SNP C -> G AC=1;AN=168;BQB=0.970215;DP=2993;DP4=1271,1633,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.035416;MQB=0.64257;MQSB=9.04895e-06;RPB=0.494205;SGB=30.0193;VDB=0.389581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R1008G|1121|LOC_Os07g28530|protein_coding|CODING|LOC_Os07g28530.1|2|1) FN1069-S.SNP.7:16697957 chr07:016697957 0 W/16697957-16697957 FN1069-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os07g28530 retrotransposon protein, putative, unclassified, expressed SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3721-S.SNP.7:16697957 chr07:016697957 0 W/16697957-16697957 FN3721-S SNP C -> A AC=2;AN=190;BQB=0.861408;DP=2140;DP4=806,1237,4,9;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00280374;MQB=0.0103093;MQSB=0.555216;RPB=0.997565;SGB=53.6492;VDB=0.923358;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y1120*|1121|LOC_Os07g28530|protein_coding|CODING|LOC_Os07g28530.1|2|1) FN1020-S.SNP.7:16698171 chr07:016698171 0 W/16698171-16698171 FN1020-S Single Base Substitution C-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2790-S.SNP.7:16699783 chr07:016699783 0 W/16699783-16699783 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.969385;DP=3817;DP4=1959,1629,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0151952;MQB=0.643108;MQSB=6.27483e-10;RPB=0.975303;SGB=58.1246;VDB=0.91226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E514K|912|LOC_Os07g28540|protein_coding|CODING|LOC_Os07g28540.1|3|1) FN-333.SNP.7:16701116 chr07:016701116 0 W/16701116-16701116 FN-333 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN-198.SNP.7:16703009 chr07:016703009 0 W/16703009-16703009 FN-198 Single Base Substitution G-A INTERGENIC HOMO SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN3548-S.SNP.7:16703009 chr07:016703009 0 W/16703009-16703009 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.894897;DP=2208;DP4=1469,646,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.92046e-06;MQSB=9.93417e-05;RPB=0.742645;SGB=44.4357;VDB=0.656818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.7:16703086 chr07:016703086 0 W/16703086-16703086 FN1089-S Single Base Substitution T-A INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN544-S.SNP.7:16703368 chr07:016703368 0 W/16703368-16703368 FN544-S Single Base Substitution C-T INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2200-S.SNP.7:16705767 chr07:016705767 0 W/16705767-16705767 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.999966;DP=4894;DP4=2279,2167,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50264e-16;MQSB=0.0609402;RPB=0.490294;SGB=64.5217;VDB=0.506223;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.7:16715774 chr07:016715774 0 W/16715774-16715774 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.962303;DP=2640;DP4=1301,1262,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.66724e-07;MQSB=0.92232;RPB=0.947902;SGB=38.987;VDB=0.651537;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C221|871|LOC_Os07g28560|protein_coding|CODING|LOC_Os07g28560.1|2|1) FN3955-S.SNP.7:16719690 chr07:016719690 0 W/16719690-16719690 FN3955-S SNP A -> G AC=1;AN=168;BQB=0.62326;DP=2449;DP4=1188,1157,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.50661e-08;MQSB=0.520012;RPB=0.895333;SGB=27.0464;VDB=0.782144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.7:16719969 chr07:016719969 0 W/16719969-16719969 FN1135-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1135-S.SNP.7:16719970 chr07:016719970 0 W/16719970-16719970 FN1135-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN466-S.SNP.7:16720627 chr07:016720627 0 W/16720627-16720627 FN466-S Single Base Substitution G-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN3296-S.SNP.7:16720983 chr07:016720983 0 W/16720983-16720983 FN3296-S SNP T -> A AC=1;AN=184;BQB=0.898789;DP=2767;DP4=1354,1308,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000361402;MQB=2.3684e-05;MQSB=0.961477;RPB=0.680901;SGB=21.6609;VDB=0.106182;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.7:16721939 chr07:016721939 0 W/16721939-16721939 FN4073-S SNP G -> A AC=1;AN=182;BQB=0.943697;DP=3001;DP4=1463,1410,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.21394e-08;MQSB=0.956533;RPB=0.907196;SGB=18.1224;VDB=0.924997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.7:16727503 chr07:016727503 0 W/16727503-16727503 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.968726;DP=4114;DP4=2269,1440,22,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000486145;MQB=3.78404e-16;MQSB=0.509909;RPB=0.962335;SGB=-125.452;VDB=0.992268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.7:16728006 chr07:016728006 0 W/16728006-16728006 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.000416952;DP=3675;DP4=1526,1838,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.44721e-05;MQSB=0.861737;RPB=0.738408;SGB=36.1006;VDB=0.840737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.7:16729181 chr07:016729181 0 W/16729181-16729181 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.203477;DP=3926;DP4=1752,1882,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.39497e-06;MQSB=0.998893;RPB=0.377885;SGB=44.9538;VDB=0.602366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.7:16732701 chr07:016732701 0 W/16732701-16732701 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.523696;DP=4390;DP4=1949,2118,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.47401e-10;MQSB=0.980519;RPB=0.992216;SGB=72.5245;VDB=0.727379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.7:16737687 chr07:016737687 0 W/16737687-16737687 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.94126;DP=2891;DP4=1638,1006,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38978e-08;MQSB=0.931862;RPB=0.914145;SGB=10.3266;VDB=0.607901;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D3|894|LOC_Os07g28600|protein_coding|CODING|LOC_Os07g28600.1|1|1) FN1731-S.SNP.7:16738630 chr07:016738630 0 W/16738630-16738630 FN1731-S SNP G -> T AC=1;AN=188;BQB=0.640736;DP=2697;DP4=1350,1308,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.011865;MQB=1.28677e-08;MQSB=0.00817696;RPB=0.977739;SGB=36.2493;VDB=0.480148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q289H|894|LOC_Os07g28600|protein_coding|CODING|LOC_Os07g28600.1|2|1) FN2086-S.SNP.7:16741616 chr07:016741616 0 W/16741616-16741616 FN2086-S SNP G -> A AC=2;AN=168;BQB=0.415464;DP=1601;DP4=1065,468,23,2;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.92505e-14;MQSB=0.80102;RPB=0.874013;SGB=75.9177;VDB=0.148236;EFF=INTERGENIC(MODIFIER||||||||||1) FN1285-S.SNP.7:16745836 chr07:016745836 0 W/16745836-16745836 FN1285-S Single Base Substitution T-C INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN369-S.SNP.7:16749123 chr07:016749123 0 W/16749123-16749123 FN369-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g28614 expressed protein SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN2461.SNP.7:16752200 chr07:016752200 0 W/16752200-16752200 FN2461 SNP C -> T AC=1;AN=200;BQB=0.13878;DP=4319;DP4=2016,2018,8,11;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.182681;MQB=0.926773;MQSB=0;RPB=0.331715;SGB=34.6953;VDB=0.162217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A793T|1054|LOC_Os07g28620|protein_coding|CODING|LOC_Os07g28620.1|2|1) FN3924-S.SNP.7:16754996 chr07:016754996 0 W/16754996-16754996 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.967518;DP=1861;DP4=542,1232,2,12;HOB=8.01154e-05;ICB=0.000161245;MQ=27;MQ0F=0.0370768;MQB=0.929554;MQSB=0.122667;RPB=0.958318;SGB=55.806;VDB=0.463618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.7:16763750 chr07:016763750 0 W/16763750-16763750 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.979657;DP=3022;DP4=1814,1154,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.49809e-06;MQSB=0.967615;RPB=0.840172;SGB=35.3493;VDB=0.609557;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.7:16765463 chr07:016765463 0 W/16765463-16765463 FN4187-S SNP C -> T AC=1;AN=170;BQB=0.787322;DP=2343;DP4=1258,1000,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.32838e-05;MQSB=0.776607;RPB=0.594251;SGB=43.4296;VDB=0.623847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.7:16769309 chr07:016769309 0 W/16769309-16769309 FN2386 SNP C -> T AC=2;AN=192;BQB=0.479272;DP=5019;DP4=2522,2166,35,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.86927e-41;MQSB=0.978193;RPB=0.817024;SGB=91.8296;VDB=0.203663;EFF=UTR_3_PRIME(MODIFIER||29||52|LOC_Os07g28644|protein_coding|CODING|LOC_Os07g28644.1|2|1) FN2386.SNP.7:16769310 chr07:016769310 0 W/16769310-16769310 FN2386 SNP A -> T AC=2;AN=192;BQB=0.94707;DP=5028;DP4=2527,2192,36,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78394e-40;MQSB=0.995906;RPB=0.802467;SGB=239.384;VDB=0.185427;EFF=UTR_3_PRIME(MODIFIER||30||52|LOC_Os07g28644|protein_coding|CODING|LOC_Os07g28644.1|2|1) FN1522-S.SNP.7:16769996 chr07:016769996 0 W/16769996-16769996 FN1522-S Single Base Substitution C-T INTERGENIC HET SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1685-S.SNP.7:16770342 chr07:016770342 0 W/16770342-16770342 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.942777;DP=1684;DP4=959,684,12,2;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.00296912;MQB=0.00463992;MQSB=0;RPB=0.310912;SGB=2.45162;VDB=0.541492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.7:16775587 chr07:016775587 0 W/16775587-16775587 FN2430 SNP C -> T AC=2;AN=200;BQB=0.990811;DP=3412;DP4=1981,1119,26,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.02712e-13;MQSB=5.26981e-05;RPB=0.990683;SGB=112.373;VDB=0.026401;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A49|179|LOC_Os07g28660|protein_coding|CODING|LOC_Os07g28660.1|1|1) FN-73.SNP.7:16776387 chr07:016776387 0 W/16776387-16776387 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1602-S.SNP.7:16776463 chr07:016776463 0 W/16776463-16776463 FN1602-S Single Base Substitution A-C INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1220-S.SNP.7:16778792 chr07:016778792 0 W/16778792-16778792 FN1220-S Single Base Substitution G-T INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN791-S.SNP.7:16788362 chr07:016788362 0 W/16788362-16788362 FN791-S Single Base Substitution T-C INTRON HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN901-S.SNP.7:16789412 chr07:016789412 0 W/16789412-16789412 FN901-S Single Base Substitution C-T INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2676-S.SNP.7:16792729 chr07:016792729 0 W/16792729-16792729 FN2676-S SNP C -> A AC=1;AN=200;BQB=0.945423;DP=4562;DP4=2073,2294,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.82277e-10;MQSB=0.965679;RPB=0.125555;SGB=72.6852;VDB=0.0684166;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V386|1204|LOC_Os07g28670|protein_coding|CODING|LOC_Os07g28670.1|6|1) FN2441.SNP.7:16794992 chr07:016794992 0 W/16794992-16794992 FN2441 SNP G -> A AC=2;AN=200;BQB=0.998284;DP=4161;DP4=2125,1777,35,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.36906e-33;MQSB=0.953633;RPB=0.868959;SGB=261.497;VDB=0.239248;EFF=INTRON(MODIFIER||||1204|LOC_Os07g28670|protein_coding|CODING|LOC_Os07g28670.1|1|1) FN3563-S.SNP.7:16800170 chr07:016800170 0 W/16800170-16800170 FN3563-S SNP G -> T AC=2;AN=188;BQB=0.900751;DP=3496;DP4=1494,1845,20,30;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.41748e-28;MQSB=0.743228;RPB=0.118765;SGB=221.624;VDB=0.0649089;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.7:16800170 chr07:016800170 0 W/16800170-16800170 W598-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1481-S.SNP.7:16801055 chr07:016801055 0 W/16801055-16801055 FN1481-S Single Base Substitution C-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2114-S.SNP.7:16802720 chr07:016802720 0 W/16802720-16802720 FN2114-S SNP A -> G AC=1;AN=168;BQB=0.0086534;DP=3885;DP4=1367,2471,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.2848e-05;MQSB=0.725652;RPB=0.998626;SGB=-177.768;VDB=0.263132;EFF=INTRON(MODIFIER||||158|LOC_Os07g28700|protein_coding|CODING|LOC_Os07g28700.1|1|1) FN2386.SNP.7:16808172 chr07:016808172 0 W/16808172-16808172 FN2386 SNP C -> T AC=1;AN=192;BQB=0.515791;DP=5162;DP4=2764,2121,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000193723;MQB=7.85628e-14;MQSB=0.973611;RPB=0.445554;SGB=27.6913;VDB=0.226106;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.7:16812434 chr07:016812434 0 W/16812434-16812434 FN1255-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3460-S.SNP.7:16820386 chr07:016820386 0 W/16820386-16820386 FN3460-S SNP C -> A AC=1;AN=184;BQB=0.989444;DP=2718;DP4=1393,1259,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2065e-05;MQSB=0.496401;RPB=0.992168;SGB=30.6558;VDB=0.349081;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D515Y|567|LOC_Os07g28740|protein_coding|CODING|LOC_Os07g28740.1|4|1) FN1287-S.SNP.7:16830023 chr07:016830023 0 W/16830023-16830023 FN1287-S Single Base Substitution T-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2620-S.SNP.7:16834043 chr07:016834043 0 W/16834043-16834043 FN2620-S SNP T -> A AC=1;AN=198;BQB=0.90484;DP=4283;DP4=1963,2147,16,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.01486e-14;MQSB=0.111876;RPB=0.231192;SGB=104.861;VDB=0.681593;EFF=INTRON(MODIFIER||||783|LOC_Os07g28760|protein_coding|CODING|LOC_Os07g28760.1|1|1) FN1047-S.SNP.7:16835086 chr07:016835086 0 W/16835086-16835086 FN1047-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g28760 transposon protein, putative, unclassified, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2471.SNP.7:16835790 chr07:016835790 0 W/16835790-16835790 FN2471 SNP T -> A AC=1;AN=200;BQB=0.874746;DP=5232;DP4=2635,2301,17,8;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.144687;MQB=0.0775453;MQSB=0;RPB=0.939878;SGB=79.9264;VDB=0.889892;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T350|783|LOC_Os07g28760|protein_coding|CODING|LOC_Os07g28760.1|3|1) FN2471.SNP.7:16835791 chr07:016835791 0 W/16835791-16835791 FN2471 SNP G -> T AC=1;AN=200;BQB=0.893696;DP=5213;DP4=2635,2262,19,8;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.145022;MQB=0.149525;MQSB=0;RPB=0.892486;SGB=55.5366;VDB=0.867521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G351C|783|LOC_Os07g28760|protein_coding|CODING|LOC_Os07g28760.1|3|1) FN-238.SNP.7:16838279 chr07:016838279 0 W/16838279-16838279 FN-238 Single Base Substitution G-T INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2460.SNP.7:16843970 chr07:016843970 0 W/16843970-16843970 FN2460 SNP T -> C AC=2;AN=200;BQB=0.61563;DP=3939;DP4=1435,2099,8,22;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0319878;MQB=0.926786;MQSB=1.73616e-08;RPB=0.769466;SGB=97.9523;VDB=0.631192;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.7:16848389 chr07:016848389 0 W/16848389-16848389 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.999801;DP=2568;DP4=1234,1240,21,9;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0272586;MQB=9.55351e-09;MQSB=0.549662;RPB=0.182251;SGB=-147.654;VDB=0.0836547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G377D|789|LOC_Os07g28780|protein_coding|CODING|LOC_Os07g28780.1|2|1) FN2249-S.SNP.7:16854274 chr07:016854274 0 W/16854274-16854274 FN2249-S SNP G -> T AC=1;AN=190;BQB=0.890486;DP=4307;DP4=1818,2192,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.16707e-05;MQSB=0.897113;RPB=0.568675;SGB=32.5467;VDB=0.343518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.7:16854456 chr07:016854456 0 W/16854456-16854456 FN1067-S Single Base Substitution C-T INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN-238.SNP.7:16856232 chr07:016856232 0 W/16856232-16856232 FN-238 Single Base Substitution C-G INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN554-S.SNP.7:16857990 chr07:016857990 0 W/16857990-16857990 FN554-S Single Base Substitution T-C INTRON HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN874-S.SNP.7:16865512 chr07:016865512 0 W/16865512-16865512 FN874-S Single Base Substitution C-T INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN874-S.SNP.7:16869100 chr07:016869100 0 W/16869100-16869100 FN874-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN4255-S.SNP.7:16876553 chr07:016876553 0 W/16876553-16876553 FN4255-S SNP C -> T AC=1;AN=170;BQB=0.996101;DP=2041;DP4=1070,856,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000148222;MQSB=0.931844;RPB=0.983151;SGB=43.4296;VDB=0.640463;EFF=INTRON(MODIFIER||||131|LOC_Os07g28830|protein_coding|CODING|LOC_Os07g28830.1|1|1) FN2692-S.SNP.7:16880205 chr07:016880205 0 W/16880205-16880205 FN2692-S SNP C -> T AC=2;AN=200;BQB=0.156901;DP=4114;DP4=2300,1567,22,10;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00340301;MQB=4.85241e-11;MQSB=0.209721;RPB=0.961246;SGB=105.163;VDB=0.765572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.7:16880617 chr07:016880617 0 W/16880617-16880617 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.889848;DP=3580;DP4=1476,1676,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0167598;MQB=0.00812591;MQSB=0.0021462;RPB=0.123095;SGB=64.5316;VDB=0.128416;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.7:16887064 chr07:016887064 0 W/16887064-16887064 FN798-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3632-S.SNP.7:16894448 chr07:016894448 0 W/16894448-16894448 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.992009;DP=2650;DP4=1413,1121,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.60857e-12;MQSB=0.984874;RPB=0.691606;SGB=57.4238;VDB=0.234662;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V273|1088|LOC_Os07g28850|protein_coding|CODING|LOC_Os07g28850.1|1|1) FN3632-S.SNP.7:16894466 chr07:016894466 0 W/16894466-16894466 FN3632-S SNP C -> A AC=1;AN=190;BQB=0.395276;DP=2641;DP4=1427,1084,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.87145e-12;MQSB=0.989223;RPB=0.480339;SGB=57.4238;VDB=0.564118;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G279|1088|LOC_Os07g28850|protein_coding|CODING|LOC_Os07g28850.1|1|1) FN4111-S.SNP.7:16904325 chr07:016904325 0 W/16904325-16904325 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.961548;DP=2385;DP4=960,1301,15,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000419287;MQB=5.3417e-18;MQSB=0.0225225;RPB=0.902146;SGB=109.356;VDB=0.301703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.7:16907619 chr07:016907619 0 W/16907619-16907619 FN3396-S SNP T -> G AC=1;AN=184;BQB=0.980304;DP=2845;DP4=1407,1323,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000702988;MQB=3.21942e-06;MQSB=0.972282;RPB=0.649988;SGB=44.2207;VDB=0.617745;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.7:16911274 chr07:016911274 0 W/16911274-16911274 W252-6-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN550-S.SNP.7:16911757 chr07:016911757 0 W/16911757-16911757 FN550-S Single Base Substitution C-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN550-S.SNP.7:16911759 chr07:016911759 0 W/16911759-16911759 FN550-S Single Base Substitution G-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. W674-4-1.SNP.7:16913181 chr07:016913181 0 W/16913181-16913181 W674-4-1 Single Base Substitution C-T INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3955-S.SNP.7:16916733 chr07:016916733 0 W/16916733-16916733 FN3955-S SNP G -> T AC=1;AN=168;BQB=0.996204;DP=2018;DP4=929,1005,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.38575e-05;MQSB=0.996629;RPB=0.760931;SGB=43.3113;VDB=0.30635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.7:16917630 chr07:016917630 0 W/16917630-16917630 FN3354-S SNP T -> C AC=1;AN=184;BQB=0.445245;DP=3619;DP4=1350,1602,13,19;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0801326;MQB=0.740206;MQSB=0;RPB=0.491091;SGB=-299.018;VDB=0.227768;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.7:16920230 chr07:016920230 0 W/16920230-16920230 FN3309-S SNP C -> T AC=1;AN=184;BQB=0.999857;DP=3418;DP4=1592,1721,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00356233;MQSB=0.059594;RPB=0.6892;SGB=53.2642;VDB=0.260621;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.7:16924015 chr07:016924015 0 W/16924015-16924015 FN3851-S SNP A -> C AC=2;AN=158;BQB=0.721899;DP=2456;DP4=1183,1183,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.16361e-13;MQSB=0.884714;RPB=0.99879;SGB=71.1374;VDB=0.242173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.7:16926073 chr07:016926073 0 W/16926073-16926073 FN3651-S SNP A -> T AC=1;AN=190;BQB=0.670556;DP=3415;DP4=1542,1712,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47763e-10;MQSB=0.884137;RPB=0.526912;SGB=67.3108;VDB=0.296488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.7:16932504 chr07:016932504 0 W/16932504-16932504 FN3355-S SNP T -> C AC=1;AN=184;BQB=0.188205;DP=2860;DP4=1492,1106,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51801e-08;MQSB=0.010453;RPB=0.643276;SGB=-12.6269;VDB=0.95643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R44G|150|LOC_Os07g28880|protein_coding|CODING|LOC_Os07g28880.1|1|1) FN2428.SNP.7:16936068 chr07:016936068 0 W/16936068-16936068 FN2428 SNP A -> G AC=2;AN=200;BQB=0.316403;DP=4888;DP4=2337,2291,21,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.28052e-22;MQSB=0.998323;RPB=0.898285;SGB=49.6192;VDB=0.269645;EFF=INTRON(MODIFIER||||436|LOC_Os07g28890|protein_coding|CODING|LOC_Os07g28890.1|2|1) FN2092-S.SNP.7:16941187 chr07:016941187 0 W/16941187-16941187 FN2092-S SNP C -> G AC=1;AN=168;BQB=0.802589;DP=2085;DP4=1222,816,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000234447;MQSB=0.994657;RPB=0.619873;SGB=17.5943;VDB=0.438363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.7:16942565 chr07:016942565 0 W/16942565-16942565 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.874977;DP=4986;DP4=2310,2425,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.28199e-19;MQSB=0.98381;RPB=0.66762;SGB=63.3521;VDB=0.847042;EFF=INTRON(MODIFIER||||1015|LOC_Os07g28900|protein_coding|CODING|LOC_Os07g28900.1|4|1) FN369-S.SNP.7:16946291 chr07:016946291 0 W/16946291-16946291 FN369-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g28900 PPR repeat domain containing protein, putative, expressed SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN1385-S.SNP.7:16947690 chr07:016947690 0 W/16947690-16947690 FN1385-S Single Base Substitution G-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN955-S.SNP.7:16963928 chr07:016963928 0 W/16963928-16963928 FN955-S Single Base Substitution C-T INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN831-S.SNP.7:16974018 chr07:016974018 0 W/16974018-16974018 FN831-S Single Base Substitution C-T INTRON HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN3974-S.SNP.7:16975541 chr07:016975541 0 W/16975541-16975541 FN3974-S SNP A -> T AC=1;AN=168;BQB=0.962139;DP=2783;DP4=1406,1199,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.64149e-07;MQSB=0.971223;RPB=0.921569;SGB=56.6036;VDB=0.79373;EFF=INTRON(MODIFIER||||795|LOC_Os07g28940|protein_coding|CODING|LOC_Os07g28940.1|2|1) FN3695-S.SNP.7:16976355 chr07:016976355 0 W/16976355-16976355 FN3695-S SNP C -> T AC=2;AN=190;BQB=0.999919;DP=2739;DP4=1259,1386,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15453e-11;MQSB=0.994516;RPB=0.489285;SGB=85.5263;VDB=0.331571;EFF=INTRON(MODIFIER||||795|LOC_Os07g28940|protein_coding|CODING|LOC_Os07g28940.1|4|1) FN2484.SNP.7:16979471 chr07:016979471 0 W/16979471-16979471 FN2484 SNP A -> G AC=1;AN=200;BQB=0.440603;DP=4985;DP4=2244,2489,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200602;MQB=1.94103e-14;MQSB=0.939147;RPB=0.483284;SGB=79.9264;VDB=0.670282;EFF=INTRON(MODIFIER||||795|LOC_Os07g28940|protein_coding|CODING|LOC_Os07g28940.1|11|1) FN3865-S.SNP.7:16980296 chr07:016980296 0 W/16980296-16980296 FN3865-S SNP T -> C AC=2;AN=158;BQB=0.954365;DP=2360;DP4=1123,1149,11,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.66141e-13;MQSB=0.909329;RPB=0.980663;SGB=64.3985;VDB=0.229233;EFF=INTRON(MODIFIER||||795|LOC_Os07g28940|protein_coding|CODING|LOC_Os07g28940.1|14|1) FN687-S.SNP.7:16980549 chr07:016980549 0 W/16980549-16980549 FN687-S Single Base Substitution A-G INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN544-S.SNP.7:16982622 chr07:016982622 0 W/16982622-16982622 FN544-S Single Base Substitution A-T INTRON HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN-248.SNP.7:16987927 chr07:016987927 0 W/16987927-16987927 FN-248 Single Base Substitution T-C INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN1506-S.SNP.7:16991746 chr07:016991746 0 W/16991746-16991746 FN1506-S Single Base Substitution C-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2386.SNP.7:17006162 chr07:017006162 0 W/17006162-17006162 FN2386 SNP G -> A AC=1;AN=190;BQB=0.836108;DP=4707;DP4=2389,2075,16,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5829e-11;MQSB=0.980788;RPB=0.353087;SGB=39.1713;VDB=0.762147;EFF=INTRON(MODIFIER||||330|LOC_Os07g28980|protein_coding|CODING|LOC_Os07g28980.1|4|1) FN2375.SNP.7:17011206 chr07:017011206 0 W/17011206-17011206 FN2375 SNP C -> T AC=1;AN=192;BQB=0.608963;DP=4807;DP4=2183,2230,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.69941e-08;MQSB=0.923074;RPB=0.956481;SGB=4.22611;VDB=0.874197;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.7:17012548 chr07:017012548 0 W/17012548-17012548 FN_786-4-1 Single Base Substitution G-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN1389-S.SNP.7:17016057 chr07:017016057 0 W/17016057-17016057 FN1389-S Single Base Substitution C-T INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN-140.SNP.7:17017847 chr07:017017847 0 W/17017847-17017847 FN-140 Single Base Substitution G-A INTRON HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1451-S.SNP.7:17018312 chr07:017018312 0 W/17018312-17018312 FN1451-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3294-S.SNP.7:17022881 chr07:017022881 0 W/17022881-17022881 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.806984;DP=3109;DP4=1516,1298,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.064651;MQB=0.972054;MQSB=1.51415e-16;RPB=0.178663;SGB=28.3187;VDB=0.345961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.7:17023233 chr07:017023233 0 W/17023233-17023233 FN-257 Single Base Substitution T-C INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2150-S.SNP.7:17023946 chr07:017023946 0 W/17023946-17023946 FN2150-S SNP A -> G AC=1;AN=168;BQB=0.0152168;DP=3726;DP4=2084,1597,14,14;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0496511;MQB=0.151984;MQSB=0.314468;RPB=0.632402;SGB=-140.764;VDB=0.887179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.7:17024161 chr07:017024161 0 W/17024161-17024161 FN2395 SNP G -> T AC=1;AN=200;BQB=0.567091;DP=5089;DP4=2429,2339,13,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0159167;MQB=0.0497266;MQSB=5.329e-09;RPB=0.544291;SGB=-10.0844;VDB=0.234279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.7:17024774 chr07:017024774 0 W/17024774-17024774 FN-159 Single Base Substitution C-T INTRON HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2702-S.SNP.7:17025332 chr07:017025332 0 W/17025332-17025332 FN2702-S SNP C -> T AC=2;AN=200;BQB=0.00889707;DP=4134;DP4=2359,1418,7,6;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00169328;MQB=0.00157299;MQSB=0.0206444;RPB=0.105958;SGB=36.6644;VDB=0.0664823;EFF=INTRON(MODIFIER||||231|LOC_Os07g29030|protein_coding|CODING|LOC_Os07g29030.1|1|1) FN-197.SNP.7:17027370 chr07:017027370 0 W/17027370-17027370 FN-197 Single Base Substitution G-T INTERGENIC HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN3424-S.SNP.7:17027609 chr07:017027609 0 W/17027609-17027609 FN3424-S SNP G -> C AC=1;AN=184;BQB=0.995808;DP=2802;DP4=1306,1398,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0278373;MQB=0.0732351;MQSB=3.81149e-22;RPB=0.534001;SGB=93.9603;VDB=0.178552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.7:17029413 chr07:017029413 0 W/17029413-17029413 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.118765;DP=4354;DP4=1983,2122,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.30366e-07;MQSB=0.946757;RPB=0.954965;SGB=-15.6211;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.7:17031294 chr07:017031294 0 W/17031294-17031294 FN395-S Single Base Substitution G-A INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-137.SNP.7:17032419 chr07:017032419 0 W/17032419-17032419 FN-137 Single Base Substitution G-A INTRON HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4260-S.SNP.7:17033039 chr07:017033039 0 W/17033039-17033039 FN4260-S SNP A -> G AC=1;AN=170;BQB=0.818489;DP=2618;DP4=1581,866,16,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.18682e-11;MQSB=0.827394;RPB=0.973343;SGB=58.9766;VDB=0.117624;EFF=INTERGENIC(MODIFIER||||||||||1) FN527-S.SNP.7:17052441 chr07:017052441 0 W/17052441-17052441 FN527-S Single Base Substitution A-G INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2299.SNP.7:17054526 chr07:017054526 0 W/17054526-17054526 FN2299 SNP G -> A AC=2;AN=190;BQB=0.994702;DP=5164;DP4=2584,2358,21,18;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=8.42201e-17;MQSB=0.0058703;RPB=0.69707;SGB=128.889;VDB=0.184633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.7:17055282 chr07:017055282 0 W/17055282-17055282 FN2349 SNP G -> A AC=2;AN=192;BQB=0.579826;DP=5168;DP4=2350,2459,26,24;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00503096;MQB=1.46749e-08;MQSB=0.995579;RPB=0.524371;SGB=4.41917;VDB=0.319097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.7:17055318 chr07:017055318 0 W/17055318-17055318 FN3570-S SNP T -> C AC=1;AN=190;BQB=0.857761;DP=3082;DP4=1546,1332,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0100584;MQB=0.0209596;MQSB=0.0229193;RPB=0.607377;SGB=53.8699;VDB=0.358864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.7:17058267 chr07:017058267 0 W/17058267-17058267 FN3294-S SNP A -> G AC=1;AN=184;BQB=0.999268;DP=2981;DP4=1367,1516,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00503187;MQB=1.52796e-05;MQSB=0.625295;RPB=0.199932;SGB=57.786;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.7:17062032 chr07:017062032 0 W/17062032-17062032 FN4190-S SNP T -> A AC=1;AN=170;BQB=0.997615;DP=2579;DP4=1244,1236,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.10397e-06;MQSB=0.999451;RPB=0.997771;SGB=43.4296;VDB=0.518745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.7:17065022 chr07:017065022 0 W/17065022-17065022 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.86705;DP=2760;DP4=1341,1326,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000724638;MQB=1.51836e-09;MQSB=0.873999;RPB=0.487411;SGB=43.2083;VDB=0.285676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A258T|444|LOC_Os07g29140|protein_coding|CODING|LOC_Os07g29140.1|3|1) FN835-S.SNP.7:17066991 chr07:017066991 0 W/17066991-17066991 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN792-S.SNP.7:17070080 chr07:017070080 0 W/17070080-17070080 FN792-S Single Base Substitution T-A INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN1379-S.SNP.7:17070887 chr07:017070887 0 W/17070887-17070887 FN1379-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g29160 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1394-S.SNP.7:17070887 chr07:017070887 0 W/17070887-17070887 FN1394-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g29160 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2174-S.SNP.7:17070887 chr07:017070887 0 W/17070887-17070887 FN2174-S SNP C -> G AC=2;AN=168;BQB=0.263453;DP=3170;DP4=1615,1509,12,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.60436e-11;MQSB=0.950654;RPB=0.999827;SGB=-11.4952;VDB=0.16139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q118E|355|LOC_Os07g29160|protein_coding|CODING|LOC_Os07g29160.1|2|1) FN3502-S.SNP.7:17070887 chr07:017070887 0 W/17070887-17070887 FN3502-S SNP C -> G AC=1;AN=188;BQB=0.999018;DP=2543;DP4=1293,1196,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55114e-11;MQSB=0.99899;RPB=0.773613;SGB=60.7873;VDB=0.366085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q118E|355|LOC_Os07g29160|protein_coding|CODING|LOC_Os07g29160.1|2|1) FN2160-S.SNP.7:17073331 chr07:017073331 0 W/17073331-17073331 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.883564;DP=3149;DP4=1663,1433,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0854239;MQB=0.233627;MQSB=0;RPB=0.299876;SGB=29.4772;VDB=0.320861;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.7:17073545 chr07:017073545 0 W/17073545-17073545 FN1233-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN985-S.SNP.7:17080193 chr07:017080193 0 W/17080193-17080193 FN985-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g29170 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3665-S.SNP.7:17080268 chr07:017080268 0 W/17080268-17080268 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.928101;DP=2809;DP4=1428,1243,26,13;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.011392;MQB=0.29625;MQSB=0.880567;RPB=0.398954;SGB=172.05;VDB=0.78946;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R631C|829|LOC_Os07g29170|protein_coding|CODING|LOC_Os07g29170.1|5|1) FN_788-1-1.SNP.7:17085675 chr07:017085675 0 W/17085675-17085675 FN_788-1-1 Single Base Substitution C-A Homo LOC_Os07g29180 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1504-S.SNP.7:17087974 chr07:017087974 0 W/17087974-17087974 FN1504-S Single Base Substitution A-T INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2723-S.SNP.7:17093962 chr07:017093962 0 W/17093962-17093962 FN2723-S SNP A -> G AC=1;AN=200;BQB=0.981835;DP=5058;DP4=2673,2084,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25001e-12;MQSB=0.81023;RPB=0.157951;SGB=12.7003;VDB=0.119785;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.7:17113554 chr07:017113554 0 W/17113554-17113554 FN4305-S SNP T -> A AC=2;AN=170;BQB=0.658599;DP=2589;DP4=1225,1211,13,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.79142e-18;MQSB=0.995859;RPB=0.438369;SGB=58.9663;VDB=0.0116563;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.7:17115659 chr07:017115659 0 W/17115659-17115659 W674-4-1 Single Base Substitution A-T INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN707-S.SNP.7:17126534 chr07:017126534 0 W/17126534-17126534 FN707-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2753-S.SNP.7:17135547 chr07:017135547 0 W/17135547-17135547 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.814311;DP=4268;DP4=2312,1461,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26333e-08;MQSB=0.261355;RPB=0.393503;SGB=63.4749;VDB=0.0454163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.7:17142324 chr07:017142324 0 W/17142324-17142324 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.999917;DP=5473;DP4=2692,2350,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.062854;MQB=0.675054;MQSB=0.00755511;RPB=0.896012;SGB=68.0854;VDB=0.358418;EFF=INTRON(MODIFIER||||252|LOC_Os07g29240|protein_coding|CODING|LOC_Os07g29240.1|1|1) FN3591-S.SNP.7:17143532 chr07:017143532 0 W/17143532-17143532 FN3591-S SNP G -> A AC=2;AN=188;BQB=0.97807;DP=3196;DP4=1624,1480,27,12;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000938673;MQB=4.88119e-17;MQSB=1.90175e-08;RPB=0.930129;SGB=171.648;VDB=0.874663;EFF=INTRON(MODIFIER||||252|LOC_Os07g29240|protein_coding|CODING|LOC_Os07g29240.1|1|1) FN2607-S.SNP.7:17143736 chr07:017143736 0 W/17143736-17143736 FN2607-S SNP T -> C AC=1;AN=198;BQB=0.999998;DP=4052;DP4=2037,1796,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00123396;MQB=0.000808171;MQSB=0.0699378;RPB=0.640161;SGB=63.3342;VDB=0.188422;EFF=INTRON(MODIFIER||||252|LOC_Os07g29240|protein_coding|CODING|LOC_Os07g29240.1|1|1) FN445-S.SNP.7:17147624 chr07:017147624 0 W/17147624-17147624 FN445-S Single Base Substitution T-A INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN266-S.SNP.7:17158518 chr07:017158518 0 W/17158518-17158518 FN266-S Single Base Substitution C-T INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2790-S.SNP.7:17180513 chr07:017180513 0 W/17180513-17180513 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.956012;DP=4474;DP4=2201,2026,16,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.2631e-19;MQSB=0.988263;RPB=0.934085;SGB=70.8662;VDB=0.663916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.7:17194896 chr07:017194896 0 W/17194896-17194896 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.884338;DP=2589;DP4=1298,1213,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33507e-06;MQSB=0.990156;RPB=0.476282;SGB=10.6662;VDB=0.0622373;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.7:17207359 chr07:017207359 0 W/17207359-17207359 FN942-S Single Base Substitution T-C INTRON HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN4024-S.SNP.7:17212213 chr07:017212213 0 W/17212213-17212213 FN4024-S SNP A -> T AC=2;AN=168;BQB=0.839301;DP=2637;DP4=1285,1219,12,1;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.48162e-08;MQSB=0.815764;RPB=0.992227;SGB=17.3231;VDB=0.07625;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.7:17213184 chr07:017213184 0 W/17213184-17213184 FN837-S Single Base Substitution C-T INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2109-S.SNP.7:17216186 chr07:017216186 0 W/17216186-17216186 FN2109-S SNP T -> C AC=1;AN=168;BQB=0.40834;DP=2134;DP4=1307,780,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00468604;MQB=0.287392;MQSB=0.121743;RPB=0.917227;SGB=-2.96336;VDB=0.672885;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.7:17216438 chr07:017216438 0 W/17216438-17216438 FN4074-S SNP G -> A AC=1;AN=182;BQB=1;DP=2757;DP4=1261,1400,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.5648e-08;MQSB=0.82447;RPB=0.978476;SGB=62.1548;VDB=0.0322535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.7:17216527 chr07:017216527 0 W/17216527-17216527 FN3381-S SNP C -> G AC=1;AN=184;BQB=0.257575;DP=3151;DP4=1402,1630,17,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00126944;MQB=3.35751e-09;MQSB=0.89132;RPB=0.798551;SGB=78.0093;VDB=0.774423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.7:17217418 chr07:017217418 0 W/17217418-17217418 FN2408 SNP C -> A AC=1;AN=200;BQB=0.415788;DP=4316;DP4=2315,1743,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37949e-12;MQSB=0.846127;RPB=0.769998;SGB=86.5007;VDB=0.11101;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.7:17219101 chr07:017219101 0 W/17219101-17219101 FN-53 Single Base Substitution A-C INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN3728-S.SNP.7:17222023 chr07:017222023 0 W/17222023-17222023 FN3728-S SNP A -> T AC=2;AN=190;BQB=0.462097;DP=3000;DP4=1473,1339,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.56599e-11;MQSB=0.986809;RPB=0.258902;SGB=131.065;VDB=0.0115571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.7:17228502 chr07:017228502 0 W/17228502-17228502 FN1379-S Single Base Substitution T-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2381.SNP.7:17247534 chr07:017247534 0 W/17247534-17247534 FN2381 SNP T -> C AC=1;AN=192;BQB=0.328632;DP=5226;DP4=2411,2462,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.4671e-14;MQSB=0.992857;RPB=0.179451;SGB=86.1165;VDB=0.536041;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.7:17248309 chr07:017248309 0 W/17248309-17248309 FN934-S Single Base Substitution T-G INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1630-S.SNP.7:17248992 chr07:017248992 0 W/17248992-17248992 FN1630-S Single Base Substitution C-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3343-S.SNP.7:17254094 chr07:017254094 0 W/17254094-17254094 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.909214;DP=3811;DP4=1539,1930,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.06247e-11;MQSB=0.956367;RPB=0.634782;SGB=-12.6269;VDB=0.544948;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M65V|413|LOC_Os07g29380|protein_coding|CODING|LOC_Os07g29380.1|1|1) FN2767-S.SNP.7:17255735 chr07:017255735 0 W/17255735-17255735 FN2767-S SNP G -> T AC=1;AN=198;BQB=0.766853;DP=4141;DP4=2105,1802,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.39675e-16;MQSB=0.998721;RPB=0.872116;SGB=60.4858;VDB=0.58637;EFF=INTRON(MODIFIER||||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.1|7|1),INTRON(MODIFIER||||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.2|7|1),INTRON(MODIFIER||||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.3|7|1) FN-283.SNP.7:17258358 chr07:017258358 0 W/17258358-17258358 FN-283 Single Base Substitution G-A INTRON HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN-143.SNP.7:17258533 chr07:017258533 0 W/17258533-17258533 FN-143 Single Base Substitution T-C INTRON HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2095-S.SNP.7:17259953 chr07:017259953 0 W/17259953-17259953 FN2095-S SNP C -> G AC=2;AN=168;BQB=0.998899;DP=1949;DP4=592,1294,9,28;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000513084;MQB=3.04287e-09;MQSB=0.719613;RPB=0.929238;SGB=-4.46574;VDB=0.954811;EFF=UTR_5_PRIME(MODIFIER||293||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.2|1|1),INTRON(MODIFIER||||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.1|1|1),INTRON(MODIFIER||||235|LOC_Os07g29390|protein_coding|CODING|LOC_Os07g29390.3|1|1) FN1619-S.SNP.7:17265759 chr07:017265759 0 W/17265759-17265759 FN1619-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-289.SNP.7:17276695 chr07:017276695 0 W/17276695-17276695 FN-289 Single Base Substitution C-G INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3630-S.SNP.7:17286181 chr07:017286181 0 W/17286181-17286181 FN3630-S SNP T -> A AC=1;AN=190;BQB=0.9298;DP=3259;DP4=1729,1415,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05626e-05;MQSB=0.976806;RPB=0.579439;SGB=35.4339;VDB=0.532922;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-3-1.SNP.7:17292747 chr07:017292747 0 W/17292747-17292747 FN_789-3-1 Single Base Substitution G-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN2375.SNP.7:17293365 chr07:017293365 0 W/17293365-17293365 FN2375 SNP A -> C AC=2;AN=192;BQB=0.920806;DP=5394;DP4=2552,2559,18,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.78709e-25;MQSB=0.871443;RPB=0.91512;SGB=190.705;VDB=0.992768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.7:17293394 chr07:017293394 0 W/17293394-17293394 FN1263-S Single Base Substitution A-G INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1228-S.SNP.7:17293881 chr07:017293881 0 W/17293881-17293881 FN1228-S Single Base Substitution C-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3822-S.SNP.7:17299917 chr07:017299917 0 W/17299917-17299917 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.965053;DP=3166;DP4=1635,1438,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00600126;MQB=0.000185718;MQSB=0.0188458;RPB=0.493284;SGB=35.4339;VDB=0.573495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.7:17301089 chr07:017301089 0 W/17301089-17301089 FN2171-S SNP C -> T AC=2;AN=168;BQB=0.241149;DP=4042;DP4=1865,2110,23,26;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.00865908;MQB=0.0318245;MQSB=0.467385;RPB=0.0804087;SGB=51.4076;VDB=0.678046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.7:17302413 chr07:017302413 0 W/17302413-17302413 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.715863;DP=3794;DP4=1900,1827,25,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.40024e-24;MQSB=0.910288;RPB=0.68327;SGB=56.4669;VDB=0.718231;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C486|799|LOC_Os07g29460|protein_coding|CODING|LOC_Os07g29460.1|3|1) FN1061-S.SNP.7:17311132 chr07:017311132 0 W/17311132-17311132 FN1061-S Single Base Substitution C-A INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3956-S.SNP.7:17311286 chr07:017311286 0 W/17311286-17311286 FN3956-S SNP T -> C AC=2;AN=168;BQB=0.895132;DP=2688;DP4=1315,1197,14,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20989e-13;MQSB=0.877405;RPB=0.687594;SGB=72.4869;VDB=0.314313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.7:17311338 chr07:017311338 0 W/17311338-17311338 FN1221-S Single Base Substitution C-T INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2661-S.SNP.7:17315477 chr07:017315477 0 W/17315477-17315477 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.99802;DP=4701;DP4=2202,2215,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4225e-13;MQSB=0.943082;RPB=0.864871;SGB=69.1109;VDB=0.934258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.7:17326597 chr07:017326597 0 W/17326597-17326597 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.882204;DP=3256;DP4=1584,1544,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.46943e-13;MQSB=0.957933;RPB=0.792109;SGB=63.9222;VDB=0.617003;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.7:17329279 chr07:017329279 0 W/17329279-17329279 FN-95 Single Base Substitution T-C INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN687-S.SNP.7:17329867 chr07:017329867 0 W/17329867-17329867 FN687-S Single Base Substitution C-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3925-S.SNP.7:17337289 chr07:017337289 0 W/17337289-17337289 FN3925-S SNP T -> C AC=1;AN=158;BQB=0.997471;DP=2444;DP4=1329,1011,12,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.88339e-08;MQSB=0.981999;RPB=0.934078;SGB=64.5449;VDB=0.197212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.7:17348236 chr07:017348236 0 W/17348236-17348236 FN1220-S Single Base Substitution T-G INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN3665-S.SNP.7:17352227 chr07:017352227 0 W/17352227-17352227 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.960878;DP=2703;DP4=1238,1348,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62776e-16;MQSB=0.999673;RPB=0.505003;SGB=100.07;VDB=0.387325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G434E|504|LOC_Os07g29550|protein_coding|CODING|LOC_Os07g29550.1|5|1) FN490-S.SNP.7:17358016 chr07:017358016 0 W/17358016-17358016 FN490-S Single Base Substitution G-A INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN1484-S.SNP.7:17358067 chr07:017358067 0 W/17358067-17358067 FN1484-S Single Base Substitution A-G INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN-412.SNP.7:17360787 chr07:017360787 0 W/17360787-17360787 FN-412 Single Base Substitution C-A INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN3484-S.SNP.7:17361087 chr07:017361087 0 W/17361087-17361087 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.986772;DP=3046;DP4=1784,1158,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=7.60971e-05;MQSB=0.168909;RPB=0.753648;SGB=35.1773;VDB=0.90649;EFF=INTERGENIC(MODIFIER||||||||||1) FN1730-S.SNP.7:17364106 chr07:017364106 0 W/17364106-17364106 FN1730-S SNP T -> A AC=1;AN=188;BQB=0.458703;DP=3893;DP4=1980,1871,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.16903e-06;MQSB=0.951237;RPB=0.681021;SGB=-13.3699;VDB=0.245649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.7:17369052 chr07:017369052 0 W/17369052-17369052 FN2403 SNP A -> T AC=1;AN=200;BQB=0.988913;DP=4561;DP4=1960,2013,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.74096e-09;MQSB=0.999921;RPB=0.980737;SGB=21.6694;VDB=0.240377;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R1010|1489|LOC_Os07g29570|protein_coding|CODING|LOC_Os07g29570.1|2|1) FN_N1-150-1.SNP.7:17376622 chr07:017376622 0 W/17376622-17376622 FN_N1-150-1 Single Base Substitution G-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1000-S.SNP.7:17379175 chr07:017379175 0 W/17379175-17379175 FN1000-S Single Base Substitution A-C INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN_815-4-1.SNP.7:17382035 chr07:017382035 0 W/17382035-17382035 FN_815-4-1 Single Base Substitution C-T Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN2301.SNP.7:17384637 chr07:017384637 0 W/17384637-17384637 FN2301 SNP G -> C AC=1;AN=192;BQB=0.618629;DP=5470;DP4=2064,3078,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.204753;MQB=0.782277;MQSB=0;RPB=0.0234571;SGB=4.22611;VDB=0.448688;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.7:17387637 chr07:017387637 0 W/17387637-17387637 FN302-S Single Base Substitution T-C INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN1551-S.SNP.7:17387811 chr07:017387811 0 W/17387811-17387811 FN1551-S Single Base Substitution T-C INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2629-S.SNP.7:17397754 chr07:017397754 0 W/17397754-17397754 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.480321;DP=4998;DP4=2116,2549,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.06317e-16;MQSB=0.997061;RPB=0.992608;SGB=50.3263;VDB=0.163824;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.7:17398352 chr07:017398352 0 W/17398352-17398352 FN3804-S SNP A -> G AC=1;AN=190;BQB=0.998145;DP=2834;DP4=1460,1236,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11678e-10;MQSB=0.999924;RPB=0.641486;SGB=80.9724;VDB=0.141113;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.7:17399975 chr07:017399975 0 W/17399975-17399975 FN1212-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1212-S.SNP.7:17399976 chr07:017399976 0 W/17399976-17399976 FN1212-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1212-S.SNP.7:17399977 chr07:017399977 0 W/17399977-17399977 FN1212-S Single Base Substitution C-T START_GAINED HET LOC_Os07g29600 zinc finger, C3HC4 type, domain containing protein, expressed SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN-164.SNP.7:17403130 chr07:017403130 0 W/17403130-17403130 FN-164 Single Base Substitution C-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN4107-S.SNP.7:17406340 chr07:017406340 0 W/17406340-17406340 FN4107-S SNP T -> A AC=2;AN=182;BQB=0.396753;DP=2658;DP4=1219,1319,9,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.78664e-10;MQSB=0.0027044;RPB=0.96369;SGB=33.1875;VDB=0.940286;EFF=INTRON(MODIFIER||||244|LOC_Os07g29610|protein_coding|CODING|LOC_Os07g29610.1|1|1) FN2606-S.SNP.7:17427690 chr07:017427690 0 W/17427690-17427690 FN2606-S SNP A -> C AC=1;AN=198;BQB=0.380699;DP=4242;DP4=1943,2124,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.82923e-05;MQSB=0.999776;RPB=0.96972;SGB=22.1736;VDB=0.501755;EFF=SPLICE_SITE_REGION(LOW||||171|LOC_Os07g29640|protein_coding|CODING|LOC_Os07g29640.1|2|1),INTRON(MODIFIER||||149|LOC_Os07g29640|protein_coding|CODING|LOC_Os07g29640.2|1|1),INTRON(MODIFIER||||149|LOC_Os07g29640|protein_coding|CODING|LOC_Os07g29640.3|2|1),INTRON(MODIFIER||||171|LOC_Os07g29640|protein_coding|CODING|LOC_Os07g29640.1|2|1) FN3356-S.SNP.7:17436494 chr07:017436494 0 W/17436494-17436494 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.609149;DP=3411;DP4=1626,1634,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.00819e-08;MQSB=0.995759;RPB=0.992871;SGB=75.8731;VDB=0.564683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.7:17437651 chr07:017437651 0 W/17437651-17437651 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.958486;DP=3633;DP4=1693,1865,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.000550509;MQB=0.34173;MQSB=0.271052;RPB=0.993676;SGB=32.441;VDB=0.931032;EFF=INTERGENIC(MODIFIER||||||||||1) FN-41.SNP.7:17438543 chr07:017438543 0 W/17438543-17438543 FN-41 Single Base Substitution A-T INTERGENIC Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN1014-S.SNP.7:17439537 chr07:017439537 0 W/17439537-17439537 FN1014-S Single Base Substitution G-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2269-S.SNP.7:17441776 chr07:017441776 0 W/17441776-17441776 FN2269-S SNP C -> T AC=1;AN=190;BQB=0.986934;DP=5048;DP4=2446,2256,19,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.06032e-17;MQSB=0.983475;RPB=0.999154;SGB=-3.2522;VDB=0.753478;EFF=INTRON(MODIFIER||||245|LOC_Os07g29670|protein_coding|CODING|LOC_Os07g29670.1|1|1) FN-407.SNP.7:17451539 chr07:017451539 0 W/17451539-17451539 FN-407 Single Base Substitution T-A INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.7:17451539 chr07:017451539 0 W/17451539-17451539 FN407-S Single Base Substitution T-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2751-S.SNP.7:17454369 chr07:017454369 0 W/17454369-17454369 FN2751-S SNP A -> T AC=1;AN=200;BQB=0.345817;DP=5097;DP4=2734,2191,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.17977e-07;MQSB=0.99844;RPB=0.164541;SGB=58.8698;VDB=0.498124;EFF=INTRON(MODIFIER||||158|LOC_Os07g29700|protein_coding|CODING|LOC_Os07g29700.1|1|1) FN2364.SNP.7:17456429 chr07:017456429 0 W/17456429-17456429 FN2364 SNP T -> C AC=1;AN=192;BQB=0.9803;DP=4582;DP4=2213,2084,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000196742;MQSB=0.70873;RPB=0.588873;SGB=25.5227;VDB=0.769036;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.7:17456966 chr07:017456966 0 W/17456966-17456966 FN833-S Single Base Substitution G-A INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN_830-6-1.SNP.7:17463389 chr07:017463389 0 W/17463389-17463389 FN_830-6-1 Single Base Substitution A-G Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2575-S.SNP.7:17464010 chr07:017464010 0 W/17464010-17464010 FN2575-S SNP A -> T AC=1;AN=198;BQB=0.998982;DP=3911;DP4=1789,1779,12,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.08114e-16;MQSB=0.999297;RPB=0.0371352;SGB=101.266;VDB=0.0431853;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.7:17469548 chr07:017469548 0 W/17469548-17469548 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2299.SNP.7:17471983 chr07:017471983 0 W/17471983-17471983 FN2299 SNP C -> T AC=2;AN=192;BQB=0.260872;DP=4020;DP4=1724,1837,12,20;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000248756;MQB=6.44063e-12;MQSB=6.40676e-09;RPB=0.954816;SGB=140.497;VDB=0.597082;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q30|152|LOC_Os07g29720|protein_coding|CODING|LOC_Os07g29720.1|1|1) FN2284.SNP.7:17475214 chr07:017475214 0 W/17475214-17475214 FN2284 SNP A -> T AC=1;AN=192;BQB=0.193695;DP=4346;DP4=1999,2047,10,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.38296e-18;MQSB=0.989637;RPB=0.756277;SGB=62.2505;VDB=0.263018;EFF=INTRON(MODIFIER||||826|LOC_Os07g29730|protein_coding|CODING|LOC_Os07g29730.1|1|1) FN2284.SNP.7:17475217 chr07:017475217 0 W/17475217-17475217 FN2284 SNP A -> T AC=1;AN=192;BQB=0.0208758;DP=4306;DP4=1953,1982,9,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.30481e-18;MQSB=0.994502;RPB=0.853169;SGB=93.2452;VDB=0.261415;EFF=INTRON(MODIFIER||||826|LOC_Os07g29730|protein_coding|CODING|LOC_Os07g29730.1|1|1) FN3385-S.SNP.7:17475594 chr07:017475594 0 W/17475594-17475594 FN3385-S SNP C -> A AC=1;AN=184;BQB=0.998117;DP=1764;DP4=850,801,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.28138e-05;MQSB=0.0877787;RPB=0.964774;SGB=18.1394;VDB=0.905336;EFF=INTRON(MODIFIER||||826|LOC_Os07g29730|protein_coding|CODING|LOC_Os07g29730.1|1|1) FN860-S.SNP.7:17475686 chr07:017475686 0 W/17475686-17475686 FN860-S Single Base Substitution C-T INTRON HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN_789-3-1.SNP.7:17476746 chr07:017476746 0 W/17476746-17476746 FN_789-3-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os07g29730 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1655-S.SNP.7:17484021 chr07:017484021 0 W/17484021-17484021 FN1655-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g29740 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN3773-S.SNP.7:17486361 chr07:017486361 0 W/17486361-17486361 FN3773-S SNP T -> G AC=1;AN=190;BQB=0.957536;DP=2317;DP4=1243,938,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000155436;MQSB=0.957204;RPB=0.52019;SGB=25.439;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.7:17490713 chr07:017490713 0 W/17490713-17490713 FN2740-S SNP A -> G AC=1;AN=200;BQB=0.00596372;DP=5017;DP4=2374,2291,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199322;MQB=7.76596e-07;MQSB=0.812738;RPB=0.645663;SGB=-59.7054;VDB=0.875097;EFF=UTR_5_PRIME(MODIFIER||174||301|LOC_Os07g29750|protein_coding|CODING|LOC_Os07g29750.1|1|1) FN588-S.SNP.7:17493273 chr07:017493273 0 W/17493273-17493273 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN588-S.SNP.7:17493274 chr07:017493274 0 W/17493274-17493274 FN588-S Single Base Substitution T-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN588-S.SNP.7:17493275 chr07:017493275 0 W/17493275-17493275 FN588-S Single Base Substitution T-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN400-S.SNP.7:17498329 chr07:017498329 0 W/17498329-17498329 FN400-S Single Base Substitution A-G INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1576-S.SNP.7:17501094 chr07:017501094 0 W/17501094-17501094 FN1576-S Single Base Substitution C-T INTRON HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1423-S.SNP.7:17502061 chr07:017502061 0 W/17502061-17502061 FN1423-S Single Base Substitution C-T INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2134-S.SNP.7:17505606 chr07:017505606 0 W/17505606-17505606 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.55929;DP=4163;DP4=2015,2100,19,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93266e-17;MQSB=0.992028;RPB=0.986474;SGB=-7.187;VDB=0.512798;EFF=INTRON(MODIFIER||||384|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.1|11|1),INTRON(MODIFIER||||380|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.2|12|1),INTRON(MODIFIER||||328|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.3|11|1) 701-3.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 701-3 Single Base Substitution T-C INTRON HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN-114.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN-114 Single Base Substitution T-C INTRON HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1356-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN1356-S Single Base Substitution T-C INTRON HOMO SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1442-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN1442-S Single Base Substitution T-C INTRON HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3997-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN3997-S SNP T -> C AC=2;AN=168;BQB=0.726765;DP=2704;DP4=1289,1280,10,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.91324e-12;MQSB=0.961622;RPB=0.62747;SGB=79.3486;VDB=0.745806;EFF=INTRON(MODIFIER||||384|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.1|11|1),INTRON(MODIFIER||||380|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.2|12|1),INTRON(MODIFIER||||328|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.3|11|1) FN4149-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN4149-S SNP T -> C AC=2;AN=170;BQB=0.997791;DP=2569;DP4=1281,1184,13,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.43241e-14;MQSB=0.98878;RPB=0.998302;SGB=65.8619;VDB=0.272015;EFF=INTRON(MODIFIER||||384|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.1|11|1),INTRON(MODIFIER||||380|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.2|12|1),INTRON(MODIFIER||||328|LOC_Os07g29770|protein_coding|CODING|LOC_Os07g29770.3|11|1) FN467-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN467-S Single Base Substitution T-C INTRON HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN871-S Single Base Substitution T-C INTRON HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_N1-213-1.SNP.7:17505771 chr07:017505771 0 W/17505771-17505771 FN_N1-213-1 Single Base Substitution T-C Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN810-S.SNP.7:17508667 chr07:017508667 0 W/17508667-17508667 FN810-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1536-S.SNP.7:17514189 chr07:017514189 0 W/17514189-17514189 FN1536-S Single Base Substitution C-A UTR_5_PRIME Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2195-S.SNP.7:17515748 chr07:017515748 0 W/17515748-17515748 FN2195-S SNP T -> C AC=1;AN=190;BQB=0.181124;DP=5014;DP4=2334,2490,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75516e-08;MQSB=0.561165;RPB=0.766891;SGB=43.2083;VDB=0.517146;EFF=INTRON(MODIFIER||||169|LOC_Os07g29794|protein_coding|CODING|LOC_Os07g29794.1|4|1) FN3515-S.SNP.7:17536570 chr07:017536570 0 W/17536570-17536570 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.99568;DP=3738;DP4=2194,1443,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.38588e-12;MQSB=0.98961;RPB=0.986681;SGB=80.782;VDB=0.474067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.7:17542504 chr07:017542504 0 W/17542504-17542504 FN2263-S SNP G -> A AC=2;AN=190;BQB=0.282292;DP=4365;DP4=2058,2060,23,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000229095;MQB=1.68506e-22;MQSB=0.604231;RPB=0.200304;SGB=135.609;VDB=0.879671;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.7:17546265 chr07:017546265 0 W/17546265-17546265 FN3579-S SNP T -> C AC=2;AN=188;BQB=0.996632;DP=2847;DP4=1131,1651,10,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.09617e-16;MQSB=0.938848;RPB=0.997416;SGB=112.585;VDB=0.930262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.7:17547318 chr07:017547318 0 W/17547318-17547318 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-217.SNP.7:17548277 chr07:017548277 0 W/17548277-17548277 FN-217 Single Base Substitution G-T INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-217.SNP.7:17548278 chr07:017548278 0 W/17548278-17548278 FN-217 Single Base Substitution A-T INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3976-S.SNP.7:17552793 chr07:017552793 0 W/17552793-17552793 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.868178;DP=2413;DP4=1209,1126,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.28754e-06;MQSB=0.914841;RPB=0.78738;SGB=47.7421;VDB=0.185475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.7:17554920 chr07:017554920 0 W/17554920-17554920 FN3770-S SNP C -> A AC=2;AN=190;BQB=0.975568;DP=2331;DP4=1040,1204,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.70267e-09;MQSB=0.967952;RPB=0.587285;SGB=67.3108;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.7:17565960 chr07:017565960 0 W/17565960-17565960 FN2739-S SNP T -> A AC=1;AN=200;BQB=0.152331;DP=4521;DP4=2573,1734,11,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=6.09971e-08;MQSB=4.65977e-14;RPB=0.844705;SGB=-38.0794;VDB=0.912262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.7:17571023 chr07:017571023 0 W/17571023-17571023 FN2274-S SNP A -> T AC=1;AN=188;BQB=0.574369;DP=5065;DP4=2364,2466,13,23;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.74574e-20;MQSB=0.0134924;RPB=0.512283;SGB=158.388;VDB=0.201804;EFF=INTRON(MODIFIER||||348|LOC_Os07g29860|protein_coding|CODING|LOC_Os07g29860.1|1|1) FN993-S.SNP.7:17578531 chr07:017578531 0 W/17578531-17578531 FN993-S Single Base Substitution T-G INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN3872-S.SNP.7:17592461 chr07:017592461 0 W/17592461-17592461 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.949653;DP=2724;DP4=1315,1302,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00220264;MQB=2.25088e-05;MQSB=0.0680936;RPB=0.900681;SGB=38.3284;VDB=0.923985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.7:17593768 chr07:017593768 0 W/17593768-17593768 FN2269-S SNP G -> C AC=1;AN=190;BQB=0.901566;DP=6734;DP4=3585,2669,21,11;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0807841;MQB=0.845328;MQSB=2.17609e-05;RPB=0.611752;SGB=30.527;VDB=0.0961584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.7:17599737 chr07:017599737 0 W/17599737-17599737 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.96641;DP=4991;DP4=2513,2133,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90203e-06;MQSB=0.301769;RPB=0.485256;SGB=-16.1361;VDB=0.468572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.7:17603801 chr07:017603801 0 W/17603801-17603801 FN2315 SNP T -> A AC=2;AN=192;BQB=0.0937115;DP=4782;DP4=2080,2028,24,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000209118;MQB=2.00697e-26;MQSB=0.921739;RPB=0.126777;SGB=-49.2687;VDB=0.222836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I40N|208|LOC_Os07g29910|protein_coding|CODING|LOC_Os07g29910.1|2|1) FN2315.SNP.7:17603802 chr07:017603802 0 W/17603802-17603802 FN2315 SNP C -> T AC=2;AN=192;BQB=0.139786;DP=4777;DP4=2113,2257,26,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000209336;MQB=1.23491e-27;MQSB=0.817368;RPB=0.588511;SGB=153.839;VDB=0.317413;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I40|208|LOC_Os07g29910|protein_coding|CODING|LOC_Os07g29910.1|2|1) FN2315.SNP.7:17603803 chr07:017603803 0 W/17603803-17603803 FN2315 SNP G -> T AC=2;AN=192;BQB=0.0927767;DP=4798;DP4=2117,2359,24,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00020842;MQB=1.72161e-27;MQSB=0.997619;RPB=0.887768;SGB=153.839;VDB=0.355478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A41S|208|LOC_Os07g29910|protein_coding|CODING|LOC_Os07g29910.1|2|1) FN909-S.SNP.7:17605640 chr07:017605640 0 W/17605640-17605640 FN909-S Single Base Substitution G-A INTERGENIC HOMO SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN-223.SNP.7:17611430 chr07:017611430 0 W/17611430-17611430 FN-223 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g29920 hypothetical protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3713-S.SNP.7:17623080 chr07:017623080 0 W/17623080-17623080 FN3713-S SNP G -> T AC=1;AN=190;BQB=0.774247;DP=2994;DP4=1476,1406,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.14284e-10;MQSB=0.895559;RPB=0.980775;SGB=50.3161;VDB=0.423241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.7:17631719 chr07:017631719 0 W/17631719-17631719 FN2150-S SNP G -> T AC=1;AN=168;BQB=0.0219461;DP=4093;DP4=2092,1937,12,22;HOB=7.08617e-05;ICB=0.000142567;MQ=15;MQ0F=0.563645;MQB=0.235162;MQSB=0;RPB=0.21605;SGB=-239.029;VDB=0.634235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.7:17645228 chr07:017645228 0 W/17645228-17645228 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.804148;DP=2829;DP4=1201,1584,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.95313e-08;MQSB=0.980017;RPB=0.721903;SGB=38.1788;VDB=0.433274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.7:17652528 chr07:017652528 0 W/17652528-17652528 FN1755-S SNP A -> T AC=1;AN=188;BQB=0.52227;DP=3583;DP4=1804,1738,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.34433e-12;MQSB=0.910612;RPB=0.223276;SGB=-39.6481;VDB=0.466567;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.7:17654062 chr07:017654062 0 W/17654062-17654062 FN1638-S Single Base Substitution G-A INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1633-S.SNP.7:17654083 chr07:017654083 0 W/17654083-17654083 FN1633-S Single Base Substitution T-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN414-S.SNP.7:17673566 chr07:017673566 0 W/17673566-17673566 FN414-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN3846-S.SNP.7:17676366 chr07:017676366 0 W/17676366-17676366 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.588553;DP=3007;DP4=1374,1367,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.51311e-05;MQSB=0.79672;RPB=0.966382;SGB=1.00337;VDB=0.777008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3765-S.SNP.7:17677244 chr07:017677244 0 W/17677244-17677244 FN3765-S SNP A -> T AC=2;AN=190;BQB=0.696474;DP=2856;DP4=1340,1357,11,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.77677e-15;MQSB=0.819898;RPB=0.99969;SGB=107.178;VDB=0.0417896;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.7:17677354 chr07:017677354 0 W/17677354-17677354 FN630-S Single Base Substitution G-A INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN-146.SNP.7:17678758 chr07:017678758 0 W/17678758-17678758 FN-146 Single Base Substitution T-C INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1322-S.SNP.7:17680150 chr07:017680150 0 W/17680150-17680150 FN1322-S Single Base Substitution C-G INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN819-S.SNP.7:17683315 chr07:017683315 0 W/17683315-17683315 FN819-S Single Base Substitution A-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2417.SNP.7:17685387 chr07:017685387 0 W/17685387-17685387 FN2417 SNP C -> T AC=2;AN=200;BQB=0.968611;DP=4950;DP4=2420,2294,21,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.31636e-22;MQSB=0.99872;RPB=0.980023;SGB=115.978;VDB=0.924886;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.7:17694340 chr07:017694340 0 W/17694340-17694340 FN2470 SNP G -> A AC=1;AN=200;BQB=0.33381;DP=4785;DP4=2072,2378,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208986;MQB=5.29633e-14;MQSB=0.893947;RPB=0.77348;SGB=22.3313;VDB=0.481419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.7:17696528 chr07:017696528 0 W/17696528-17696528 FN3389-S SNP T -> C AC=1;AN=184;BQB=0.724241;DP=2796;DP4=1172,1494,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.80478e-08;MQSB=0.54198;RPB=0.301192;SGB=62.3078;VDB=0.684414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.7:17696803 chr07:017696803 0 W/17696803-17696803 FN1373-S Single Base Substitution A-G INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2284.SNP.7:17698770 chr07:017698770 0 W/17698770-17698770 FN2284 SNP C -> G AC=1;AN=192;BQB=0.999987;DP=4683;DP4=2572,1743,22,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.92447e-16;MQSB=0.84617;RPB=0.745164;SGB=69.9435;VDB=0.610112;EFF=INTRON(MODIFIER||||401|LOC_Os07g30030|protein_coding|CODING|LOC_Os07g30030.1|2|1) FN1118-S.SNP.7:17699183 chr07:017699183 0 W/17699183-17699183 FN1118-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g30030 retrotransposon protein, putative, unclassified, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN3375-S.SNP.7:17701032 chr07:017701032 0 W/17701032-17701032 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.895105;DP=3343;DP4=1641,1526,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00269219;MQB=0.188602;MQSB=0.000215978;RPB=0.496017;SGB=48.7425;VDB=0.153225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.7:17702485 chr07:017702485 0 W/17702485-17702485 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.565447;DP=3043;DP4=1377,1519,15,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.00811e-17;MQSB=0.989685;RPB=0.528053;SGB=82.3989;VDB=0.88019;EFF=INTRON(MODIFIER||||1272|LOC_Os07g30040|protein_coding|CODING|LOC_Os07g30040.1|8|1) FN-63.SNP.7:17702545 chr07:017702545 0 W/17702545-17702545 FN-63 Single Base Substitution G-A INTRON HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1099-S.SNP.7:17704026 chr07:017704026 0 W/17704026-17704026 FN1099-S Single Base Substitution C-G INTRON HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3858-S.SNP.7:17704890 chr07:017704890 0 W/17704890-17704890 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.981622;DP=2702;DP4=1109,1496,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.44158e-05;MQSB=0.978747;RPB=0.949522;SGB=38.3284;VDB=0.211686;EFF=INTRON(MODIFIER||||1272|LOC_Os07g30040|protein_coding|CODING|LOC_Os07g30040.1|5|1) FN4037-S.SNP.7:17706239 chr07:017706239 0 W/17706239-17706239 FN4037-S SNP G -> A AC=2;AN=168;BQB=0.955646;DP=3218;DP4=1442,1629,19,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.58099e-25;MQSB=0.953739;RPB=0.506015;SGB=123.949;VDB=0.175243;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P612L|1272|LOC_Os07g30040|protein_coding|CODING|LOC_Os07g30040.1|3|1) FN4037-S.SNP.7:17706240 chr07:017706240 0 W/17706240-17706240 FN4037-S SNP G -> A AC=2;AN=168;BQB=0.812342;DP=3201;DP4=1445,1604,19,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.36072e-23;MQSB=0.933356;RPB=0.449663;SGB=167.374;VDB=0.180974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P612S|1272|LOC_Os07g30040|protein_coding|CODING|LOC_Os07g30040.1|3|1) FN2781-S.SNP.7:17710919 chr07:017710919 0 W/17710919-17710919 FN2781-S SNP G -> T AC=1;AN=198;BQB=0.492181;DP=3893;DP4=2003,1641,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000256871;MQB=1.15562e-17;MQSB=0.993895;RPB=0.87226;SGB=30.086;VDB=0.578364;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.7:17714712 chr07:017714712 0 W/17714712-17714712 FN1624-S Single Base Substitution C-G INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN3978-S.SNP.7:17716577 chr07:017716577 0 W/17716577-17716577 FN3978-S SNP A -> T AC=2;AN=168;BQB=0.920529;DP=2828;DP4=1532,1161,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.66835e-15;MQSB=0.978597;RPB=0.874187;SGB=96.481;VDB=0.730251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.7:17716578 chr07:017716578 0 W/17716578-17716578 FN3978-S SNP A -> T AC=2;AN=168;BQB=0.998288;DP=2826;DP4=1508,1176,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.82615e-15;MQSB=0.989731;RPB=0.816935;SGB=96.481;VDB=0.706874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.7:17722109 chr07:017722109 0 W/17722109-17722109 FN2259-S SNP T -> C AC=2;AN=190;BQB=0.513379;DP=3357;DP4=1257,1504,13,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.64928e-09;MQSB=0.000643999;RPB=0.678783;SGB=-37.6628;VDB=0.701428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.7:17722728 chr07:017722728 0 W/17722728-17722728 FN3769-S SNP C -> T AC=1;AN=190;BQB=0.976433;DP=2993;DP4=1274,1608,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.41069e-10;MQSB=0.890167;RPB=0.993937;SGB=71.8647;VDB=0.209676;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.7:17732185 chr07:017732185 0 W/17732185-17732185 FN2479 SNP C -> T AC=1;AN=200;BQB=0.0712541;DP=4553;DP4=1840,2410,22,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000658906;MQB=1.83574e-15;MQSB=0.974303;RPB=0.460665;SGB=81.5883;VDB=0.88409;EFF=INTRON(MODIFIER||||226|LOC_Os07g30060|protein_coding|CODING|LOC_Os07g30060.1|1|1) FN-247.SNP.7:17733716 chr07:017733716 0 W/17733716-17733716 FN-247 Single Base Substitution G-A INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN860-S.SNP.7:17733989 chr07:017733989 0 W/17733989-17733989 FN860-S Single Base Substitution G-C INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN805-S.SNP.7:17738688 chr07:017738688 0 W/17738688-17738688 FN805-S Single Base Substitution C-G INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2684-S.SNP.7:17741476 chr07:017741476 0 W/17741476-17741476 FN2684-S SNP T -> C AC=1;AN=200;BQB=0.527477;DP=4991;DP4=2603,2173,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.87734e-18;MQSB=0.741912;RPB=0.773306;SGB=94.3471;VDB=0.0186256;EFF=INTRON(MODIFIER||||101|LOC_Os07g30090|protein_coding|CODING|LOC_Os07g30090.2|1|1) FN811-S.SNP.7:17743284 chr07:017743284 0 W/17743284-17743284 FN811-S Single Base Substitution T-C INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4311-S.SNP.7:17747198 chr07:017747198 0 W/17747198-17747198 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.770953;DP=2399;DP4=1318,1032,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.81756e-07;MQSB=0.982419;RPB=0.856925;SGB=43.4296;VDB=0.486768;EFF=INTRON(MODIFIER||||448|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.2|11|1),INTRON(MODIFIER||||570|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.1|10|1) FN4143-S.SNP.7:17748081 chr07:017748081 0 W/17748081-17748081 FN4143-S SNP A -> G AC=2;AN=170;BQB=0.993022;DP=2768;DP4=1196,1451,14,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.98186e-18;MQSB=0.991428;RPB=0.891931;SGB=132.282;VDB=0.619955;EFF=INTRON(MODIFIER||||570|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.1|10|1),INTRON(MODIFIER||||448|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.2|10|1) FN4073-S.SNP.7:17752117 chr07:017752117 0 W/17752117-17752117 FN4073-S SNP C -> A AC=1;AN=182;BQB=0.988436;DP=3015;DP4=1328,1613,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.31279e-08;MQSB=0.971725;RPB=0.643029;SGB=53.1331;VDB=0.640685;EFF=INTRON(MODIFIER||||570|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.1|4|1),INTRON(MODIFIER||||448|LOC_Os07g30100|protein_coding|CODING|LOC_Os07g30100.2|4|1) FN1299-S.SNP.7:17757972 chr07:017757972 0 W/17757972-17757972 FN1299-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN4187-S.SNP.7:17762782 chr07:017762782 0 W/17762782-17762782 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.975155;DP=2363;DP4=1240,1056,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.2087e-06;MQSB=0.939215;RPB=0.998852;SGB=34.5445;VDB=0.90234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.7:17765574 chr07:017765574 0 W/17765574-17765574 FN1409-S Single Base Substitution A-G INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN3938-S.SNP.7:17766523 chr07:017766523 0 W/17766523-17766523 FN3938-S SNP A -> T AC=1;AN=158;BQB=0.986055;DP=2468;DP4=1162,1219,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.01675e-05;MQSB=0.944982;RPB=0.892025;SGB=42.6978;VDB=0.720456;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.7:17779697 chr07:017779697 0 W/17779697-17779697 FN483-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN733-S.SNP.7:17797044 chr07:017797044 0 W/17797044-17797044 FN733-S Single Base Substitution C-A INTRON HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN3743-S.SNP.7:17799678 chr07:017799678 0 W/17799678-17799678 FN3743-S SNP A -> T AC=1;AN=190;BQB=0.727606;DP=2468;DP4=959,1417,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.1783e-12;MQSB=0.954269;RPB=0.87287;SGB=71.6393;VDB=0.28667;EFF=INTRON(MODIFIER||||187|LOC_Os07g30150|protein_coding|CODING|LOC_Os07g30150.1|2|1) FN774-S.SNP.7:17807959 chr07:017807959 0 W/17807959-17807959 FN774-S Single Base Substitution A-G INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3698-S.SNP.7:17810178 chr07:017810178 0 W/17810178-17810178 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.964013;DP=2720;DP4=1240,1389,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.68484e-08;MQSB=0.978726;RPB=0.999771;SGB=21.1058;VDB=0.359019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.7:17810868 chr07:017810868 0 W/17810868-17810868 FN1413-S Single Base Substitution A-G INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3596-S.SNP.7:17815049 chr07:017815049 0 W/17815049-17815049 FN3596-S SNP T -> C AC=2;AN=188;BQB=0.995178;DP=2696;DP4=1328,1302,13,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.49211e-12;MQSB=0.88303;RPB=0.718469;SGB=89.8686;VDB=0.524762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.7:17824231 chr07:017824231 0 W/17824231-17824231 FN2195-S SNP T -> A AC=1;AN=190;BQB=0.729253;DP=4930;DP4=2338,2391,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020284;MQB=3.40775e-17;MQSB=0.921179;RPB=0.978148;SGB=-6.02158;VDB=0.523804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.7:17843911 chr07:017843911 0 W/17843911-17843911 FN3558-S SNP C -> T AC=1;AN=188;BQB=0.998214;DP=2700;DP4=1378,1242,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.62963e-09;MQSB=0.980816;RPB=0.9486;SGB=67.1521;VDB=0.878284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P449S|454|LOC_Os07g30200|protein_coding|CODING|LOC_Os07g30200.2|12|1),INTRON(MODIFIER||||555|LOC_Os07g30200|protein_coding|CODING|LOC_Os07g30200.1|11|1) FN1368-S.SNP.7:17845212 chr07:017845212 0 W/17845212-17845212 FN1368-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2533-S.SNP.7:17845212 chr07:017845212 0 W/17845212-17845212 FN2533-S SNP T -> C AC=1;AN=198;BQB=0.313465;DP=4171;DP4=2051,1911,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.74261e-12;MQSB=0.961152;RPB=0.995578;SGB=42.3199;VDB=0.966648;EFF=UTR_3_PRIME(MODIFIER||63||385|LOC_Os07g30210|protein_coding|CODING|LOC_Os07g30210.1|4|1) FN2752-S.SNP.7:17845212 chr07:017845212 0 W/17845212-17845212 FN2752-S SNP T -> C AC=1;AN=200;BQB=0.992044;DP=5096;DP4=2589,2305,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.14539e-14;MQSB=0.999923;RPB=0.999717;SGB=95.7111;VDB=0.159471;EFF=UTR_3_PRIME(MODIFIER||63||385|LOC_Os07g30210|protein_coding|CODING|LOC_Os07g30210.1|4|1) FN1556-S.SNP.7:17853750 chr07:017853750 0 W/17853750-17853750 FN1556-S Single Base Substitution C-T INTRON Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2379.SNP.7:17872614 chr07:017872614 0 W/17872614-17872614 FN2379 SNP A -> G AC=1;AN=192;BQB=0.426118;DP=5368;DP4=2712,2390,20,28;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.56867e-24;MQSB=0.954399;RPB=0.919796;SGB=213.527;VDB=0.500877;EFF=INTRON(MODIFIER||||658|LOC_Os07g30240|protein_coding|CODING|LOC_Os07g30240.1|3|1) FN1023-S.SNP.7:17879245 chr07:017879245 0 W/17879245-17879245 FN1023-S Single Base Substitution A-G INTRON HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3991-S.SNP.7:17881750 chr07:017881750 0 W/17881750-17881750 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.98431;DP=2461;DP4=1260,1112,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.83539e-08;MQSB=0.94323;RPB=0.623227;SGB=47.7421;VDB=0.720427;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A261V|296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|11|1) FN3991-S.SNP.7:17881751 chr07:017881751 0 W/17881751-17881751 FN3991-S SNP C -> A AC=1;AN=168;BQB=0.965748;DP=2460;DP4=1266,1091,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.90561e-08;MQSB=0.940745;RPB=0.61846;SGB=47.7421;VDB=0.732755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A261S|296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|11|1) FN2167-S.SNP.7:17882621 chr07:017882621 0 W/17882621-17882621 FN2167-S SNP T -> C AC=1;AN=168;BQB=0.836522;DP=4298;DP4=2191,2066,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23698e-12;MQSB=0.999764;RPB=0.116946;SGB=-12.3568;VDB=0.245795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y136C|296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|8|1) FN1015-S.SNP.7:17882978 chr07:017882978 0 W/17882978-17882978 FN1015-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g30250 RFT1, putative, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN-217.SNP.7:17883294 chr07:017883294 0 W/17883294-17883294 FN-217 Single Base Substitution A-T INTRON HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1150-S.SNP.7:17884056 chr07:017884056 0 W/17884056-17884056 FN1150-S Single Base Substitution T-A UTR_5_PRIME HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN4044-S.SNP.7:17885440 chr07:017885440 0 W/17885440-17885440 FN4044-S SNP G -> C AC=1;AN=168;BQB=0.995634;DP=2471;DP4=1253,1136,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.60932e-07;MQSB=0.928922;RPB=0.94946;SGB=43.3113;VDB=0.0593139;EFF=INTRON(MODIFIER||||296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|4|1) FN1424-S.SNP.7:17885663 chr07:017885663 0 W/17885663-17885663 FN1424-S Single Base Substitution A-T INTRON HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3928-S.SNP.7:17887716 chr07:017887716 0 W/17887716-17887716 FN3928-S SNP G -> A AC=2;AN=158;BQB=0.966481;DP=2360;DP4=917,1327,15,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.30317e-15;MQSB=0.998924;RPB=0.736666;SGB=121.348;VDB=0.801051;EFF=START_GAINED(LOW||||296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|1|1),UTR_5_PRIME(MODIFIER||3919||296|LOC_Os07g30250|protein_coding|CODING|LOC_Os07g30250.1|1|1) FN3578-S.SNP.7:17891357 chr07:017891357 0 W/17891357-17891357 FN3578-S SNP T -> A AC=2;AN=188;BQB=0.833153;DP=2757;DP4=1566,1051,16,11;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0438883;MQB=0.00554322;MQSB=2.56248e-08;RPB=0.725288;SGB=85.5904;VDB=0.368782;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.7:17903742 chr07:017903742 0 W/17903742-17903742 FN547-S Single Base Substitution G-A INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3312-S.SNP.7:17906514 chr07:017906514 0 W/17906514-17906514 FN3312-S SNP T -> C AC=1;AN=184;BQB=0.994422;DP=2997;DP4=1456,1388,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10284e-06;MQSB=0.868362;RPB=0.437154;SGB=48.7425;VDB=0.911296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.7:17917572 chr07:017917572 0 W/17917572-17917572 FN2281 SNP C -> T AC=2;AN=192;BQB=0.969869;DP=5067;DP4=2554,2099,34,26;HOB=0.0206163;ICB=0.494846;MQ=37;MQ0F=0.0228932;MQB=0.978877;MQSB=0.605219;RPB=0.99595;SGB=10.0626;VDB=0.937812;EFF=INTRON(MODIFIER||||1567|LOC_Os07g30310|protein_coding|CODING|LOC_Os07g30310.1|1|1) FN3794-S.SNP.7:17921495 chr07:017921495 0 W/17921495-17921495 FN3794-S SNP G -> T AC=1;AN=190;BQB=0.998814;DP=3435;DP4=1909,1415,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.106259;MQB=0.99996;MQSB=0.579949;RPB=0.996905;SGB=67.3108;VDB=0.354307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A1005S|1567|LOC_Os07g30310|protein_coding|CODING|LOC_Os07g30310.1|3|1) FN-190.SNP.7:17923713 chr07:017923713 0 W/17923713-17923713 FN-190 Single Base Substitution T-C INTRON HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3928-S.SNP.7:17927029 chr07:017927029 0 W/17927029-17927029 FN3928-S SNP G -> A AC=2;AN=158;BQB=0.934859;DP=2596;DP4=1075,1418,22,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.12216e-23;MQSB=0.289821;RPB=0.442709;SGB=160.673;VDB=0.186352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.7:17927030 chr07:017927030 0 W/17927030-17927030 FN3928-S SNP G -> T AC=2;AN=158;BQB=0.943842;DP=2596;DP4=1079,1404,22,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.23282e-23;MQSB=0.248122;RPB=0.413943;SGB=160.673;VDB=0.139006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.7:17931340 chr07:017931340 0 W/17931340-17931340 FN3896-S SNP G -> A AC=1;AN=158;BQB=0.87752;DP=2575;DP4=1154,1319,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0271845;MQB=0.127191;MQSB=6.22923e-05;RPB=0.394213;SGB=51.4366;VDB=0.454895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.7:17931486 chr07:017931486 0 W/17931486-17931486 FN2184-S SNP C -> T AC=2;AN=190;BQB=0.822942;DP=4958;DP4=2756,1845,24,16;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.14885;MQB=0.381477;MQSB=0.999104;RPB=0.704855;SGB=132.055;VDB=0.90339;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.7:17932657 chr07:017932657 0 W/17932657-17932657 FN3823-S SNP G -> T AC=1;AN=190;BQB=0.849237;DP=3154;DP4=986,2049,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00697527;MQB=0.00281882;MQSB=0.448348;RPB=0.909719;SGB=62.7569;VDB=0.888862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.7:17932991 chr07:017932991 0 W/17932991-17932991 FN1286-S Single Base Substitution G-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2608-S.SNP.7:17934104 chr07:017934104 0 W/17934104-17934104 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.999705;DP=3433;DP4=1706,1578,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.050102;MQB=0.951065;MQSB=2.18916e-05;RPB=0.524836;SGB=26.5745;VDB=0.536793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.7:17943177 chr07:017943177 0 W/17943177-17943177 FN3773-S SNP C -> A AC=1;AN=190;BQB=0.936918;DP=2168;DP4=1037,1035,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0267528;MQB=0.624781;MQSB=0.0120233;RPB=0.658691;SGB=62.7569;VDB=0.348521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.7:17944395 chr07:017944395 0 W/17944395-17944395 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.83749;DP=2574;DP4=1007,1478,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.001554;MQB=2.36462e-07;MQSB=0.0105312;RPB=0.971932;SGB=76.4186;VDB=0.713528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.7:17944487 chr07:017944487 0 W/17944487-17944487 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.967824;DP=1808;DP4=784,927,2,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000553097;MQB=0.0044057;MQSB=0.706683;RPB=0.62914;SGB=25.5891;VDB=0.192892;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.7:17948527 chr07:017948527 0 W/17948527-17948527 FN426-S Single Base Substitution G-A INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN920-S.SNP.7:17952028 chr07:017952028 0 W/17952028-17952028 FN920-S Single Base Substitution A-G INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN_543-2-6.SNP.7:17952563 chr07:017952563 0 W/17952563-17952563 FN_543-2-6 Single Base Substitution A-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN4136-S.SNP.7:17953796 chr07:017953796 0 W/17953796-17953796 FN4136-S SNP C -> T AC=2;AN=170;BQB=0.210838;DP=2811;DP4=1585,1129,9,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.62686e-09;MQSB=0.785462;RPB=0.269436;SGB=105.627;VDB=0.333462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.7:17954085 chr07:017954085 0 W/17954085-17954085 FN3415-S SNP C -> G AC=1;AN=184;BQB=0.987188;DP=2887;DP4=1324,1486,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.31997e-06;MQSB=0.854882;RPB=0.532712;SGB=35.1773;VDB=0.871535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.7:17955361 chr07:017955361 0 W/17955361-17955361 FN2102-S SNP A -> G AC=1;AN=168;BQB=0.36933;DP=4076;DP4=2025,2024,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.06185e-06;MQSB=0.0347617;RPB=0.668534;SGB=-0.101747;VDB=0.949243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.7:17956511 chr07:017956511 0 W/17956511-17956511 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.860821;DP=3786;DP4=2021,1695,11,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.97658e-08;MQSB=0.371121;RPB=0.154425;SGB=53.5223;VDB=0.724296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A21T|108|LOC_Os07g30340|protein_coding|CODING|LOC_Os07g30340.1|1|1) FN1741-S.SNP.7:17957606 chr07:017957606 0 W/17957606-17957606 FN1741-S SNP G -> A AC=1;AN=188;BQB=0.314091;DP=3397;DP4=1493,1858,7,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.56661e-10;MQSB=0.926402;RPB=0.24332;SGB=-69.186;VDB=0.811605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.7:17962161 chr07:017962161 0 W/17962161-17962161 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.986512;DP=3379;DP4=1634,1570,7,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000295946;MQB=0.00012447;MQSB=0.999269;RPB=0.935295;SGB=22.1736;VDB=0.727644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P312L|1051|LOC_Os07g30350|protein_coding|CODING|LOC_Os07g30350.1|2|1) FN2530-S.SNP.7:17963160 chr07:017963160 0 W/17963160-17963160 FN2530-S SNP G -> A AC=2;AN=198;BQB=0.401623;DP=3776;DP4=1853,1721,10,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.40963e-09;MQSB=0.275113;RPB=0.997897;SGB=95.5;VDB=0.847178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A601T|1051|LOC_Os07g30350|protein_coding|CODING|LOC_Os07g30350.1|3|1) FN-202.SNP.7:17963923 chr07:017963923 0 W/17963923-17963923 FN-202 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g30350 retrotransposon protein, putative, unclassified, expressed SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3681-S.SNP.7:17965737 chr07:017965737 0 W/17965737-17965737 FN3681-S SNP A -> T AC=1;AN=190;BQB=0.99496;DP=2526;DP4=1314,1110,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0114806;MQB=0.0586494;MQSB=0.159735;RPB=0.967936;SGB=58.2031;VDB=0.368309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M1713K|1914|LOC_Os07g30360|protein_coding|CODING|LOC_Os07g30360.1|2|1) FN1665-S.SNP.7:17965748 chr07:017965748 0 W/17965748-17965748 FN1665-S Single Base Substitution G-T STOP_GAINED Homo LOC_Os07g30360 retrotransposon protein, putative, unclassified, expressed SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1427-S.SNP.7:17966317 chr07:017966317 0 W/17966317-17966317 FN1427-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g30360 retrotransposon protein, putative, unclassified, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2191-S.SNP.7:17966795 chr07:017966795 0 W/17966795-17966795 FN2191-S SNP C -> T AC=2;AN=190;BQB=0.632418;DP=4603;DP4=2222,2023,17,20;HOB=0.020831;ICB=0.494793;MQ=24;MQ0F=0.298718;MQB=0.0573407;MQSB=1.00572e-11;RPB=0.297792;SGB=162.942;VDB=0.799391;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1360|1914|LOC_Os07g30360|protein_coding|CODING|LOC_Os07g30360.1|2|1) FN3985-S.SNP.7:17994260 chr07:017994260 0 W/17994260-17994260 FN3985-S SNP G -> C AC=1;AN=168;BQB=0.999473;DP=5320;DP4=2286,2868,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.099812;MQB=0.995136;MQSB=1.96182e-44;RPB=0.993899;SGB=89.641;VDB=0.848546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.7:17996175 chr07:017996175 0 W/17996175-17996175 FN2358 SNP T -> C AC=1;AN=192;BQB=0.756517;DP=9751;DP4=4873,4306,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0530202;MQB=0.127191;MQSB=4.16603e-40;RPB=0.900292;SGB=-12.5113;VDB=0.244877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.7:17997641 chr07:017997641 0 W/17997641-17997641 FN1018-S Single Base Substitution G-A INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN3563-S.SNP.7:17999618 chr07:017999618 0 W/17999618-17999618 FN3563-S SNP T -> C AC=1;AN=188;BQB=0.974185;DP=5563;DP4=2377,3035,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.08872e-06;MQSB=0.694252;RPB=0.788938;SGB=94.4119;VDB=0.557653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.7:17999662 chr07:017999662 0 W/17999662-17999662 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.30012;DP=9845;DP4=4168,4753,21,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000101574;MQB=2.36852e-14;MQSB=2.27947e-12;RPB=0.38999;SGB=-363.993;VDB=0.226166;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.7:18008225 chr07:018008225 0 W/18008225-18008225 FN2375 SNP C -> A AC=1;AN=192;BQB=0.022048;DP=9276;DP4=4437,4254,16,4;HOB=5.42535e-05;ICB=0.000109072;MQ=20;MQ0F=0.333226;MQB=0.015044;MQSB=0.781641;RPB=0.851894;SGB=12.0478;VDB=0.837236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.7:18008446 chr07:018008446 0 W/18008446-18008446 FN2316 SNP G -> A AC=1;AN=192;BQB=0.013323;DP=9506;DP4=4340,4523,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0115716;MQB=0.402323;MQSB=0;RPB=0.897015;SGB=-8.56084;VDB=0.831048;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.7:18008446 chr07:018008446 0 W/18008446-18008446 FN863-S Single Base Substitution G-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3356-S.SNP.7:18010524 chr07:018010524 0 W/18010524-18010524 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.917201;DP=4429;DP4=2676,1526,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000451569;MQB=1.90061e-06;MQSB=1.93599e-28;RPB=0.910509;SGB=53.3568;VDB=0.249373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1032-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN1032-S Single Base Substitution G-T INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1170-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN1170-S Single Base Substitution G-T INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2092-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN2092-S SNP G -> T AC=1;AN=168;BQB=0.023225;DP=5543;DP4=3677,1785,41,15;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0173191;MQB=0.999963;MQSB=1.97578e-05;RPB=0.842311;SGB=-724.1;VDB=0.99998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN2233-S SNP G -> T AC=1;AN=190;BQB=0.0018786;DP=8979;DP4=4710,3333,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.00735048;MQB=0.993669;MQSB=1.21961e-12;RPB=0.340512;SGB=-187.19;VDB=0.996708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN3845-S SNP G -> T AC=1;AN=190;BQB=0.975778;DP=5167;DP4=3110,1814,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.00890265;MQB=0.841117;MQSB=0.709861;RPB=0.813501;SGB=69.6295;VDB=0.436859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN3902-S SNP G -> T AC=1;AN=158;BQB=0.776792;DP=4863;DP4=2783,1858,14,12;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.00822537;MQB=0.778764;MQSB=0.991007;RPB=0.727206;SGB=17.1501;VDB=0.562478;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN4093-S SNP G -> T AC=1;AN=182;BQB=0.788404;DP=4956;DP4=2715,2066,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=39;MQ0F=0.00847458;MQB=0.925939;MQSB=0.721089;RPB=0.741577;SGB=-16.3775;VDB=0.80552;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN429-S Single Base Substitution G-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN453-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN453-S Single Base Substitution G-T INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN732-S.SNP.7:18011209 chr07:018011209 0 W/18011209-18011209 FN732-S Single Base Substitution G-T INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN337-S.SNP.7:18013017 chr07:018013017 0 W/18013017-18013017 FN337-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g30430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN967-S.SNP.7:18016107 chr07:018016107 0 W/18016107-18016107 FN967-S Single Base Substitution G-A INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN3282-S.SNP.7:18021190 chr07:018021190 0 W/18021190-18021190 FN3282-S SNP C -> A AC=1;AN=184;BQB=0.832456;DP=6085;DP4=2691,3122,15,17;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00246508;MQB=0.1212;MQSB=1.6602e-15;RPB=0.971123;SGB=139.178;VDB=0.0386054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.7:18028459 chr07:018028459 0 W/18028459-18028459 FN2480 SNP C -> T AC=1;AN=200;BQB=0.878948;DP=8440;DP4=4339,3630,15,9;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.271445;MQB=0.674055;MQSB=1.00576e-21;RPB=0.872776;SGB=76.3213;VDB=0.957512;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P536|1464|LOC_Os07g30460|protein_coding|CODING|LOC_Os07g30460.1|1|1) FN3875-S.SNP.7:18054232 chr07:018054232 0 W/18054232-18054232 FN3875-S SNP T -> A AC=1;AN=158;BQB=0.843994;DP=2405;DP4=1205,1086,13,7;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.123493;MQB=0.712582;MQSB=0.00351783;RPB=0.979314;SGB=33.2965;VDB=0.754144;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.7:18054476 chr07:018054476 0 W/18054476-18054476 FN-121 Single Base Substitution T-C INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN565-S.SNP.7:18060858 chr07:018060858 0 W/18060858-18060858 FN565-S Single Base Substitution G-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN742-S.SNP.7:18072989 chr07:018072989 0 W/18072989-18072989 FN742-S Single Base Substitution G-C INTERGENIC HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2276-S.SNP.7:18078384 chr07:018078384 0 W/18078384-18078384 FN2276-S SNP C -> G AC=2;AN=190;BQB=0.999983;DP=5154;DP4=2499,2113,21,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00194024;MQB=1.9802e-23;MQSB=0.369016;RPB=0.76365;SGB=171.148;VDB=0.952274;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.7:18083606 chr07:018083606 0 W/18083606-18083606 FN_786-4-1 Single Base Substitution A-G HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN2198-S.SNP.7:18084179 chr07:018084179 0 W/18084179-18084179 FN2198-S SNP A -> G AC=2;AN=190;BQB=0.343127;DP=5327;DP4=2271,2714,18,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.44685e-22;MQSB=0.941791;RPB=0.924165;SGB=55.389;VDB=0.673799;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.7:18088502 chr07:018088502 0 W/18088502-18088502 FN499-S Single Base Substitution C-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN499-S.SNP.7:18088504 chr07:018088504 0 W/18088504-18088504 FN499-S Single Base Substitution C-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2687-S.SNP.7:18095552 chr07:018095552 0 W/18095552-18095552 FN2687-S SNP C -> A AC=1;AN=200;BQB=0.0563724;DP=5886;DP4=2703,2855,10,6;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.224601;MQB=0.165571;MQSB=4.96506e-11;RPB=0.246083;SGB=68.0801;VDB=0.0104371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A992S|1928|LOC_Os07g30580|protein_coding|CODING|LOC_Os07g30580.1|3|1) FN2687-S.SNP.7:18095553 chr07:018095553 0 W/18095553-18095553 FN2687-S SNP A -> C AC=1;AN=200;BQB=0.46157;DP=5890;DP4=2607,2935,10,11;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.222071;MQB=0.566906;MQSB=1.02475e-11;RPB=0.739694;SGB=-36.8949;VDB=0.097568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D991E|1928|LOC_Os07g30580|protein_coding|CODING|LOC_Os07g30580.1|3|1) FN2790-S.SNP.7:18104029 chr07:018104029 0 W/18104029-18104029 FN2790-S SNP A -> G AC=1;AN=198;BQB=0.872677;DP=4458;DP4=2131,2102,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.44747e-15;MQSB=0.95248;RPB=0.41398;SGB=60.4858;VDB=0.763077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.7:18107581 chr07:018107581 0 W/18107581-18107581 FN2330 SNP A -> G AC=2;AN=192;BQB=0.819725;DP=5359;DP4=2691,2307,29,43;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.2999e-39;MQSB=0.996911;RPB=0.969935;SGB=169.953;VDB=0.251784;EFF=INTRON(MODIFIER||||475|LOC_Os07g30600|protein_coding|CODING|LOC_Os07g30600.1|2|1) FN2684-S.SNP.7:18117031 chr07:018117031 0 W/18117031-18117031 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.957408;DP=5153;DP4=2406,2369,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35617e-09;MQSB=0.985272;RPB=0.802381;SGB=29.4849;VDB=0.346701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.7:18117584 chr07:018117584 0 W/18117584-18117584 FN2212-S SNP T -> G AC=1;AN=190;BQB=0.938355;DP=4939;DP4=2443,2170,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10697e-13;MQSB=0.998371;RPB=0.150869;SGB=103.742;VDB=0.751972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.7:18124638 chr07:018124638 0 W/18124638-18124638 FN3800-S SNP A -> T AC=1;AN=190;BQB=0.66244;DP=2503;DP4=1107,1304,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43976e-05;MQSB=0.268215;RPB=0.865957;SGB=15.9981;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.7:18125340 chr07:018125340 0 W/18125340-18125340 FN426-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3802-S.SNP.7:18129280 chr07:018129280 0 W/18129280-18129280 FN3802-S SNP C -> A AC=2;AN=190;BQB=0.688547;DP=2850;DP4=1445,1299,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.44662e-17;MQSB=0.991146;RPB=0.971786;SGB=153.834;VDB=0.879282;EFF=INTRON(MODIFIER||||163|LOC_Os07g30630|protein_coding|CODING|LOC_Os07g30630.1|1|1) FN1433-S.SNP.7:18138939 chr07:018138939 0 W/18138939-18138939 FN1433-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1028-S.SNP.7:18146769 chr07:018146769 0 W/18146769-18146769 FN1028-S Single Base Substitution A-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1416-S.SNP.7:18149688 chr07:018149688 0 W/18149688-18149688 FN1416-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g30670 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1258-S.SNP.7:18151365 chr07:018151365 0 W/18151365-18151365 FN1258-S Single Base Substitution G-C INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3632-S.SNP.7:18152219 chr07:018152219 0 W/18152219-18152219 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.998986;DP=2955;DP4=1502,1330,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.47127e-08;MQSB=0.88432;RPB=0.808806;SGB=62.7569;VDB=0.658519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.7:18154375 chr07:018154375 0 W/18154375-18154375 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.717265;DP=2234;DP4=843,1322,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38335e-06;MQSB=0.986047;RPB=0.969732;SGB=53.2642;VDB=0.981349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2162-S.SNP.7:18156006 chr07:018156006 0 W/18156006-18156006 FN2162-S SNP A -> C AC=1;AN=168;BQB=0.026982;DP=4065;DP4=1960,2049,21,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.54293e-13;MQSB=0.967302;RPB=0.989713;SGB=-223.45;VDB=0.985973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.7:18157010 chr07:018157010 0 W/18157010-18157010 FN2441 SNP G -> A AC=1;AN=200;BQB=0.995518;DP=4598;DP4=1818,2422,10,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.81714e-15;MQSB=0.498458;RPB=0.990372;SGB=-72.2589;VDB=0.368585;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.7:18157439 chr07:018157439 0 W/18157439-18157439 FN810-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g30690 indole-3-acetate beta-glucosyltransferase, putative, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-345.SNP.7:18160613 chr07:018160613 0 W/18160613-18160613 FN-345 Single Base Substitution A-T UTR_3_PRIME HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN337-S.SNP.7:18162574 chr07:018162574 0 W/18162574-18162574 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3804-S.SNP.7:18162848 chr07:018162848 0 W/18162848-18162848 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.351907;DP=2286;DP4=991,1199,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00831146;MQB=0.00014853;MQSB=0.0111837;RPB=0.998678;SGB=15.9981;VDB=0.431004;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.7:18165406 chr07:018165406 0 W/18165406-18165406 FN957-S Single Base Substitution C-A INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2739-S.SNP.7:18207560 chr07:018207560 0 W/18207560-18207560 FN2739-S SNP A -> G AC=1;AN=200;BQB=0.979288;DP=5182;DP4=2469,2497,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.50107e-18;MQSB=0.897793;RPB=0.287518;SGB=90.7419;VDB=0.106614;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T590|927|LOC_Os07g30774|protein_coding|CODING|LOC_Os07g30774.1|10|1) FN3698-S.SNP.7:18209006 chr07:018209006 0 W/18209006-18209006 FN3698-S SNP T -> A AC=1;AN=190;BQB=0.961091;DP=2755;DP4=1351,1305,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.93429e-06;MQSB=0.999955;RPB=0.953142;SGB=30.8803;VDB=0.961302;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N327I|927|LOC_Os07g30774|protein_coding|CODING|LOC_Os07g30774.1|9|1) FN3698-S.SNP.7:18209007 chr07:018209007 0 W/18209007-18209007 FN3698-S SNP T -> A AC=1;AN=190;BQB=0.785966;DP=2766;DP4=1387,1275,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.10873e-05;MQSB=0.999542;RPB=0.988487;SGB=21.8853;VDB=0.977718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N327Y|927|LOC_Os07g30774|protein_coding|CODING|LOC_Os07g30774.1|9|1) FN1742-S.SNP.7:18212445 chr07:018212445 0 W/18212445-18212445 FN1742-S SNP T -> A AC=2;AN=188;BQB=0.856534;DP=3210;DP4=1176,1971,12,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.19096e-17;MQSB=0.951725;RPB=0.521796;SGB=-5.76375;VDB=0.507544;EFF=INTRON(MODIFIER||||927|LOC_Os07g30774|protein_coding|CODING|LOC_Os07g30774.1|2|1) FN1394-S.SNP.7:18213917 chr07:018213917 0 W/18213917-18213917 FN1394-S Single Base Substitution C-A INTRON HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2614-S.SNP.7:18218638 chr07:018218638 0 W/18218638-18218638 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.766466;DP=4606;DP4=2308,2029,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.92301e-10;MQSB=0.9555;RPB=0.357434;SGB=54.5295;VDB=0.533516;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.7:18219417 chr07:018219417 0 W/18219417-18219417 FN-341 Single Base Substitution A-G INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2536-S.SNP.7:18219804 chr07:018219804 0 W/18219804-18219804 FN2536-S SNP C -> A AC=1;AN=198;BQB=0.970135;DP=4489;DP4=2129,1986,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000222767;MQB=2.27273e-08;MQSB=0.892244;RPB=0.349258;SGB=18.9639;VDB=0.0848216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.7:18220433 chr07:018220433 0 W/18220433-18220433 FN1565-S Single Base Substitution G-T INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1332-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN1332-S Single Base Substitution G-A INTRON HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1704-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.994712;DP=3924;DP4=1997,1886,22,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.24166e-18;MQSB=0.979342;RPB=0.831256;SGB=-5.76375;VDB=0.381134;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN2317.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN2317 SNP G -> A AC=2;AN=192;BQB=0.861797;DP=4983;DP4=2197,2506,17,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.58192e-22;MQSB=0.767078;RPB=0.999788;SGB=43.3348;VDB=0.680493;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN2674-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN2674-S SNP G -> A AC=2;AN=200;BQB=0.783073;DP=5214;DP4=2286,2638,24,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.92453e-25;MQSB=0.96516;RPB=0.402246;SGB=107.64;VDB=0.126523;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN3493-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN3493-S SNP G -> A AC=2;AN=184;BQB=0.871175;DP=2688;DP4=1152,1461,21,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.15703e-18;MQSB=0.915173;RPB=0.964951;SGB=106.184;VDB=0.714797;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN3712-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.926163;DP=3022;DP4=1434,1520,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.10221e-05;MQSB=0.965898;RPB=0.749026;SGB=28.9929;VDB=0.0102182;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN3775-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.954466;DP=2687;DP4=1178,1436,11,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.18447e-09;MQSB=0.970837;RPB=0.762129;SGB=46.7622;VDB=0.216616;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN3865-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN3865-S SNP G -> A AC=2;AN=158;BQB=0.894778;DP=2576;DP4=1103,1376,13,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.85939e-23;MQSB=0.919423;RPB=0.970099;SGB=75.9465;VDB=0.450722;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN4116-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.867845;DP=3001;DP4=1343,1621,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.88553e-07;MQSB=0.980083;RPB=0.97173;SGB=13.1007;VDB=0.170749;EFF=INTRON(MODIFIER||||302|LOC_Os07g30790|protein_coding|CODING|LOC_Os07g30790.1|2|1) FN514-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN514-S Single Base Substitution G-A INTRON HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN742-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN742-S Single Base Substitution G-A INTRON HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN778-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN778-S Single Base Substitution G-A INTRON HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN899-S.SNP.7:18226425 chr07:018226425 0 W/18226425-18226425 FN899-S Single Base Substitution G-A INTRON HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3938-S.SNP.7:18232678 chr07:018232678 0 W/18232678-18232678 FN3938-S SNP A -> T AC=1;AN=158;BQB=0.966336;DP=2600;DP4=1328,1182,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.43679e-05;MQSB=0.927511;RPB=0.997152;SGB=33.9591;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.7:18234829 chr07:018234829 0 W/18234829-18234829 FN-181 Single Base Substitution C-T INTERGENIC HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3731-S.SNP.7:18248375 chr07:018248375 0 W/18248375-18248375 FN3731-S SNP G -> A AC=2;AN=190;BQB=0.0775558;DP=2682;DP4=1398,1058,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.65964e-13;MQSB=0.645333;RPB=0.00200034;SGB=-6.02158;VDB=0.524107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.7:18250523 chr07:018250523 0 W/18250523-18250523 FN2229-S SNP C -> T AC=1;AN=190;BQB=0.978789;DP=4202;DP4=1218,2436,6,19;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0311756;MQB=0.796442;MQSB=0;RPB=0.654993;SGB=49.1985;VDB=0.191193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.7:18250768 chr07:018250768 0 W/18250768-18250768 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.846619;DP=2390;DP4=1596,629,10,0;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.01841;MQB=0.838017;MQSB=3.15626e-05;RPB=0.936176;SGB=39.699;VDB=0.560195;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.7:18252378 chr07:018252378 0 W/18252378-18252378 FN1121-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3437-S.SNP.7:18254536 chr07:018254536 0 W/18254536-18254536 FN3437-S SNP A -> T AC=2;AN=184;BQB=0.993942;DP=2490;DP4=1101,1325,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.6786e-08;MQSB=0.998264;RPB=0.959043;SGB=62.3078;VDB=0.97025;EFF=INTRON(MODIFIER||||261|LOC_Os07g30840|protein_coding|CODING|LOC_Os07g30840.2|7|1),INTRON(MODIFIER||||262|LOC_Os07g30840|protein_coding|CODING|LOC_Os07g30840.1|7|1),INTRON(MODIFIER||||248|LOC_Os07g30840|protein_coding|CODING|LOC_Os07g30840.4|7|1),INTRON(MODIFIER||||249|LOC_Os07g30840|protein_coding|CODING|LOC_Os07g30840.3|7|1) FN2606-S.SNP.7:18259083 chr07:018259083 0 W/18259083-18259083 FN2606-S SNP T -> C AC=1;AN=198;BQB=0.871282;DP=4160;DP4=2133,1817,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000216395;MQSB=0.724251;RPB=0.981499;SGB=18.5788;VDB=0.521411;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A139|236|LOC_Os07g30850|protein_coding|CODING|LOC_Os07g30850.1|3|1) FN1516-S.SNP.7:18260666 chr07:018260666 0 W/18260666-18260666 FN1516-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g30850 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN4126-S.SNP.7:18265419 chr07:018265419 0 W/18265419-18265419 FN4126-S SNP T -> C AC=2;AN=182;BQB=0.982981;DP=3492;DP4=1593,1738,21,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.13635e-22;MQSB=0.945297;RPB=0.974556;SGB=140.954;VDB=0.329928;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.7:18266611 chr07:018266611 0 W/18266611-18266611 FN771-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g30860 expressed protein SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1022-S.SNP.7:18276752 chr07:018276752 0 W/18276752-18276752 FN1022-S Single Base Substitution T-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN4108-S.SNP.7:18289283 chr07:018289283 0 W/18289283-18289283 FN4108-S SNP C -> A AC=1;AN=182;BQB=0.918106;DP=3094;DP4=1349,1649,1,11;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.00678733;MQB=0.000170499;MQSB=1.59786e-20;RPB=0.536183;SGB=48.6223;VDB=0.205941;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V1015|1062|LOC_Os07g30890|protein_coding|CODING|LOC_Os07g30890.1|2|1) FN927-S.SNP.7:18290247 chr07:018290247 0 W/18290247-18290247 FN927-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g30900 retrotransposon protein, putative, unclassified, expressed SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN3785-S.SNP.7:18311070 chr07:018311070 0 W/18311070-18311070 FN3785-S SNP T -> G AC=1;AN=190;BQB=0.975151;DP=2784;DP4=1374,1331,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.01613e-06;MQSB=0.750403;RPB=0.998514;SGB=35.4339;VDB=0.730881;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A463|657|LOC_Os07g30930|protein_coding|CODING|LOC_Os07g30930.1|1|1) FN-292.SNP.7:18327144 chr07:018327144 0 W/18327144-18327144 FN-292 Single Base Substitution C-T INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN3806-S.SNP.7:18331074 chr07:018331074 0 W/18331074-18331074 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.997819;DP=2634;DP4=1206,1325,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50454e-07;MQSB=0.999848;RPB=0.256049;SGB=44.5415;VDB=0.507556;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.7:18334445 chr07:018334445 0 W/18334445-18334445 FN-120 Single Base Substitution T-C INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2469.SNP.7:18344572 chr07:018344572 0 W/18344572-18344572 FN2469 SNP T -> C AC=1;AN=200;BQB=0.878059;DP=4920;DP4=2127,2512,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8532e-09;MQSB=0.993809;RPB=0.98566;SGB=40.2696;VDB=0.375798;EFF=INTRON(MODIFIER||||1165|LOC_Os07g30980|protein_coding|CODING|LOC_Os07g30980.1|14|1) FN1409-S.SNP.7:18350620 chr07:018350620 0 W/18350620-18350620 FN1409-S Single Base Substitution A-C SPLICE_SITE_DONOR HET LOC_Os07g30980 uvrD/REP helicase family protein, putative, expressed SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-251.SNP.7:18353718 chr07:018353718 0 W/18353718-18353718 FN-251 Single Base Substitution G-A INTERGENIC HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN3921-S.SNP.7:18354825 chr07:018354825 0 W/18354825-18354825 FN3921-S SNP A -> T AC=1;AN=158;BQB=0.873865;DP=2120;DP4=1093,895,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000206595;MQSB=0.999451;RPB=0.954479;SGB=23.9652;VDB=0.874265;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.7:18355494 chr07:018355494 0 W/18355494-18355494 FN511-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g30990 ubiquitin family protein, putative, expressed SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3713-S.SNP.7:18355616 chr07:018355616 0 W/18355616-18355616 FN3713-S SNP C -> A AC=1;AN=190;BQB=0.781389;DP=2797;DP4=1279,1451,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000160019;MQSB=0.99938;RPB=0.678475;SGB=25.439;VDB=0.218005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H80N|86|LOC_Os07g30990|protein_coding|CODING|LOC_Os07g30990.1|2|1) FN1483-S.SNP.7:18356650 chr07:018356650 0 W/18356650-18356650 FN1483-S Single Base Substitution C-A INTERGENIC Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2754-S.SNP.7:18359116 chr07:018359116 0 W/18359116-18359116 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.999238;DP=4612;DP4=2182,2178,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3829e-10;MQSB=0.978497;RPB=0.996605;SGB=26.8797;VDB=0.0991356;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.7:18367356 chr07:018367356 0 W/18367356-18367356 FN579-S Single Base Substitution G-A INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN3790-S.SNP.7:18371356 chr07:018371356 0 W/18371356-18371356 FN3790-S SNP G -> A AC=1;AN=190;BQB=0.803056;DP=2521;DP4=1340,1081,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.56566e-05;MQSB=0.221711;RPB=0.621972;SGB=28.9929;VDB=0.157852;EFF=INTRON(MODIFIER||||242|LOC_Os07g31020|protein_coding|CODING|LOC_Os07g31020.1|1|1) FN-243.SNP.7:18377446 chr07:018377446 0 W/18377446-18377446 FN-243 Single Base Substitution T-C INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN3510-S.SNP.7:18378972 chr07:018378972 0 W/18378972-18378972 FN3510-S SNP A -> G AC=1;AN=188;BQB=0.919113;DP=3205;DP4=1675,1424,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28721e-06;MQSB=0.00133648;RPB=0.958551;SGB=13.3597;VDB=0.155926;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.7:18384012 chr07:018384012 0 W/18384012-18384012 FN4206-S SNP G -> T AC=1;AN=170;BQB=0.474779;DP=2677;DP4=1253,1370,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0466941;MQB=0.820998;MQSB=0.993504;RPB=0.995963;SGB=31.4354;VDB=0.24747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q119H|1081|LOC_Os07g31050|protein_coding|CODING|LOC_Os07g31050.1|1|1) FN3058-S.SNP.7:18397932 chr07:018397932 0 W/18397932-18397932 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.941923;DP=2806;DP4=1514,1204,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25067e-10;MQSB=0.967046;RPB=0.397152;SGB=60.4004;VDB=0.456643;EFF=INTRON(MODIFIER||||758|LOC_Os07g31070|protein_coding|CODING|LOC_Os07g31070.1|4|1) FN1754-S.SNP.7:18408545 chr07:018408545 0 W/18408545-18408545 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.0906289;DP=3673;DP4=2112,1540,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0100735;MQB=0.260876;MQSB=1.12589e-11;RPB=0.691815;SGB=-33.7109;VDB=0.83435;EFF=INTRON(MODIFIER||||223|LOC_Os07g31110|protein_coding|CODING|LOC_Os07g31110.1|2|1) FN2457.SNP.7:18410246 chr07:018410246 0 W/18410246-18410246 FN2457 SNP C -> T AC=1;AN=200;BQB=0.935403;DP=5090;DP4=2269,2553,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96233e-12;MQSB=0.94874;RPB=0.608612;SGB=39.9056;VDB=0.3793;EFF=INTRON(MODIFIER||||223|LOC_Os07g31110|protein_coding|CODING|LOC_Os07g31110.1|3|1) FN2196-S.SNP.7:18411595 chr07:018411595 0 W/18411595-18411595 FN2196-S SNP A -> G AC=2;AN=190;BQB=0.843954;DP=4280;DP4=2225,1736,31,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.10768e-25;MQSB=0.927002;RPB=0.263336;SGB=167.594;VDB=0.0402276;EFF=INTRON(MODIFIER||||223|LOC_Os07g31110|protein_coding|CODING|LOC_Os07g31110.1|4|1) FN-153.SNP.7:18413192 chr07:018413192 0 W/18413192-18413192 FN-153 Single Base Substitution C-T INTRON HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1451-S.SNP.7:18416996 chr07:018416996 0 W/18416996-18416996 FN1451-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-182.SNP.7:18422384 chr07:018422384 0 W/18422384-18422384 FN-182 Single Base Substitution G-C INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN730-S.SNP.7:18423520 chr07:018423520 0 W/18423520-18423520 FN730-S Single Base Substitution G-A INTERGENIC HOMO SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN2629-S.SNP.7:18427437 chr07:018427437 0 W/18427437-18427437 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.716383;DP=4802;DP4=2509,2139,9,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.03207;MQB=0.331135;MQSB=0;RPB=0.100108;SGB=61.9006;VDB=0.181809;EFF=INTERGENIC(MODIFIER||||||||||1) FN-84.SNP.7:18427843 chr07:018427843 0 W/18427843-18427843 FN-84 Single Base Substitution T-A INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN418-S.SNP.7:18431318 chr07:018431318 0 W/18431318-18431318 FN418-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2592-S.SNP.7:18439949 chr07:018439949 0 W/18439949-18439949 FN2592-S SNP G -> A AC=1;AN=198;BQB=0.787398;DP=3518;DP4=1594,1760,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0713474;MQB=0.695854;MQSB=0;RPB=0.997059;SGB=67.9293;VDB=0.779375;EFF=INTRON(MODIFIER||||720|LOC_Os07g31160|protein_coding|CODING|LOC_Os07g31160.1|1|1) FN2684-S.SNP.7:18452965 chr07:018452965 0 W/18452965-18452965 FN2684-S SNP T -> C AC=1;AN=200;BQB=0.710963;DP=4723;DP4=2078,2460,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51236e-14;MQSB=0.997377;RPB=0.260659;SGB=90.7419;VDB=0.841231;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.7:18462335 chr07:018462335 0 W/18462335-18462335 FN-402 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g31190 OsWAK71 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN-402.SNP.7:18462339 chr07:018462339 0 W/18462339-18462339 FN-402 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN426-S.SNP.7:18483811 chr07:018483811 0 W/18483811-18483811 FN426-S Single Base Substitution A-C INTERGENIC HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN2785-S.SNP.7:18486799 chr07:018486799 0 W/18486799-18486799 FN2785-S SNP T -> C AC=1;AN=186;BQB=0.44177;DP=3672;DP4=1740,1604,8,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.7216e-11;MQSB=0.943706;RPB=0.696241;SGB=31.9395;VDB=0.176961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D146G|172|LOC_Os07g31230|protein_coding|CODING|LOC_Os07g31230.1|4|1) FN-171.SNP.7:18489318 chr07:018489318 0 W/18489318-18489318 FN-171 Single Base Substitution G-C INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1062-S.SNP.7:18491250 chr07:018491250 0 W/18491250-18491250 FN1062-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g31240 retrotransposon protein, putative, unclassified, expressed SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2417.SNP.7:18491421 chr07:018491421 0 W/18491421-18491421 FN2417 SNP T -> A AC=1;AN=200;BQB=0.55232;DP=4345;DP4=2367,1463,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.01256e-09;MQSB=0.63185;RPB=0.999143;SGB=6.27959;VDB=0.447742;EFF=INTRON(MODIFIER||||1152|LOC_Os07g31240|protein_coding|CODING|LOC_Os07g31240.1|4|1) FN-114.SNP.7:18493664 chr07:018493664 0 W/18493664-18493664 FN-114 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g31240 retrotransposon protein, putative, unclassified, expressed SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN4149-S.SNP.7:18493664 chr07:018493664 0 W/18493664-18493664 FN4149-S SNP C -> G AC=2;AN=170;BQB=0.990942;DP=2847;DP4=1378,1396,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.8077e-15;MQSB=0.96463;RPB=0.981288;SGB=110.069;VDB=0.558122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ctc|V385L|1152|LOC_Os07g31240|protein_coding|CODING|LOC_Os07g31240.1|2|1) FN748-S.SNP.7:18497305 chr07:018497305 0 W/18497305-18497305 FN748-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g31244 expressed protein SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4023-S.SNP.7:18497735 chr07:018497735 0 W/18497735-18497735 FN4023-S SNP C -> T AC=1;AN=168;BQB=0.858787;DP=2683;DP4=1038,1509,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.68611e-06;MQSB=0.926364;RPB=0.66333;SGB=34.4498;VDB=0.683888;EFF=UTR_5_PRIME(MODIFIER||315||210|LOC_Os07g31244|protein_coding|CODING|LOC_Os07g31244.1|1|1) FN975-S.SNP.7:18504864 chr07:018504864 0 W/18504864-18504864 FN975-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g31260 expressed protein SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN733-S.SNP.7:18509019 chr07:018509019 0 W/18509019-18509019 FN733-S Single Base Substitution T-A INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN1282-S.SNP.7:18511996 chr07:018511996 0 W/18511996-18511996 FN1282-S Single Base Substitution A-T INTRON HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN4108-S.SNP.7:18512732 chr07:018512732 0 W/18512732-18512732 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.99684;DP=2783;DP4=1432,1273,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.37472e-05;MQSB=0.987547;RPB=0.886881;SGB=30.5793;VDB=0.060425;EFF=INTRON(MODIFIER||||309|LOC_Os07g31270|protein_coding|CODING|LOC_Os07g31270.1|6|1) FN230-S.SNP.7:18516309 chr07:018516309 0 W/18516309-18516309 FN230-S Single Base Substitution G-A INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3811-S.SNP.7:18516917 chr07:018516917 0 W/18516917-18516917 FN3811-S SNP T -> G AC=1;AN=190;BQB=0.665435;DP=3214;DP4=1283,1651,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31205e-09;MQSB=0.201386;RPB=0.450676;SGB=33.8752;VDB=0.874766;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.7:18550731 chr07:018550731 0 W/18550731-18550731 FN-235 Single Base Substitution T-G INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3527-S.SNP.7:18551286 chr07:018551286 0 W/18551286-18551286 FN3527-S SNP G -> A AC=1;AN=188;BQB=0.892919;DP=2622;DP4=1269,1305,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26351e-06;MQSB=0.999772;RPB=0.128378;SGB=21.8113;VDB=0.841751;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.7:18552720 chr07:018552720 0 W/18552720-18552720 FN-76 Single Base Substitution G-A INTRON HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2251-S.SNP.7:18573109 chr07:018573109 0 W/18573109-18573109 FN2251-S SNP A -> T AC=1;AN=190;BQB=0.00590438;DP=4385;DP4=2071,1930,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00346741;MQSB=0.988699;RPB=0.722917;SGB=1.00337;VDB=0.507471;EFF=INTRON(MODIFIER||||209|LOC_Os07g31350|protein_coding|CODING|LOC_Os07g31350.1|4|1) FN1485-S.SNP.7:18580886 chr07:018580886 0 W/18580886-18580886 FN1485-S Single Base Substitution A-T INTRON HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN1028-S.SNP.7:18592066 chr07:018592066 0 W/18592066-18592066 FN1028-S Single Base Substitution T-C INTRON HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN406-S.SNP.7:18592889 chr07:018592889 0 W/18592889-18592889 FN406-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN2114-S.SNP.7:18608522 chr07:018608522 0 W/18608522-18608522 FN2114-S SNP C -> T AC=2;AN=168;BQB=0.485205;DP=4092;DP4=1871,2160,19,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.18287e-19;MQSB=0.954459;RPB=0.994865;SGB=-5.46373;VDB=0.796377;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.7:18613429 chr07:018613429 0 W/18613429-18613429 FN3566-S SNP T -> A AC=1;AN=188;BQB=0.871389;DP=2590;DP4=1262,1240,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.85556e-07;MQSB=0.998074;RPB=0.988302;SGB=43.0708;VDB=0.621909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F677Y|811|LOC_Os07g31420|protein_coding|CODING|LOC_Os07g31420.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F612Y|744|LOC_Os07g31420|protein_coding|CODING|LOC_Os07g31420.2|3|1) FN4249-S.SNP.7:18621418 chr07:018621418 0 W/18621418-18621418 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.4046;DP=2321;DP4=1132,1085,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.39624e-05;MQSB=0.95553;RPB=0.636325;SGB=52.3148;VDB=0.91653;EFF=START_GAINED(LOW||||471|LOC_Os07g31440|protein_coding|CODING|LOC_Os07g31440.2|1|1),START_GAINED(LOW||||470|LOC_Os07g31440|protein_coding|CODING|LOC_Os07g31440.3|1|1),UTR_5_PRIME(MODIFIER||325||471|LOC_Os07g31440|protein_coding|CODING|LOC_Os07g31440.2|1|1),UTR_5_PRIME(MODIFIER||325||470|LOC_Os07g31440|protein_coding|CODING|LOC_Os07g31440.3|1|1) FN1758-S.SNP.7:18625087 chr07:018625087 0 W/18625087-18625087 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.267136;DP=3615;DP4=1681,1882,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000276625;MQB=4.61959e-17;MQSB=0.99946;RPB=0.695107;SGB=-42.3883;VDB=0.90252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.7:18628135 chr07:018628135 0 W/18628135-18628135 FN3733-S SNP A -> T AC=1;AN=190;BQB=0.934694;DP=3140;DP4=1646,1393,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15057e-14;MQSB=0.865581;RPB=0.871532;SGB=94.6341;VDB=0.758168;EFF=INTRON(MODIFIER||||2192|LOC_Os07g31450|protein_coding|CODING|LOC_Os07g31450.1|10|1) FN1129-S.SNP.7:18629577 chr07:018629577 0 W/18629577-18629577 FN1129-S Single Base Substitution A-G INTRON HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2589-S.SNP.7:18631993 chr07:018631993 0 W/18631993-18631993 FN2589-S SNP A -> G AC=1;AN=198;BQB=0.445255;DP=4191;DP4=1707,2278,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238607;MQB=3.44696e-08;MQSB=0.395581;RPB=0.526194;SGB=43.7442;VDB=0.43455;EFF=INTRON(MODIFIER||||2192|LOC_Os07g31450|protein_coding|CODING|LOC_Os07g31450.1|6|1) FN1692-S.SNP.7:18632102 chr07:018632102 0 W/18632102-18632102 FN1692-S SNP A -> C AC=1;AN=188;BQB=0.00788447;DP=4095;DP4=2003,2060,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.3605e-05;MQSB=0.984109;RPB=0.832953;SGB=-14.9998;VDB=0.988787;EFF=INTRON(MODIFIER||||2192|LOC_Os07g31450|protein_coding|CODING|LOC_Os07g31450.1|6|1) FN2619-S.SNP.7:18638429 chr07:018638429 0 W/18638429-18638429 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.966361;DP=4271;DP4=2097,1954,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.05789e-17;MQSB=0.977102;RPB=0.924624;SGB=63.0809;VDB=0.666922;EFF=INTRON(MODIFIER||||2192|LOC_Os07g31450|protein_coding|CODING|LOC_Os07g31450.1|1|1) FN2619-S.SNP.7:18665638 chr07:018665638 0 W/18665638-18665638 FN2619-S SNP G -> A AC=2;AN=198;BQB=0.998817;DP=4018;DP4=1802,1990,29,40;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.07266e-38;MQSB=0.930318;RPB=0.932774;SGB=110.468;VDB=0.976509;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.7:18667199 chr07:018667199 0 W/18667199-18667199 FN706-S Single Base Substitution C-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2282.SNP.7:18682455 chr07:018682455 0 W/18682455-18682455 FN2282 SNP C -> G AC=1;AN=192;BQB=0.607671;DP=4351;DP4=2398,1684,24,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00505631;MQB=4.26383e-16;MQSB=0.000548567;RPB=0.233957;SGB=80.2009;VDB=0.264219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.7:18690226 chr07:018690226 0 W/18690226-18690226 FN2426 SNP C -> T AC=1;AN=200;BQB=0.98452;DP=4035;DP4=2192,1538,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40488e-10;MQSB=0.0290328;RPB=0.714612;SGB=54.6902;VDB=0.843591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G694S|1274|LOC_Os07g31500|protein_coding|CODING|LOC_Os07g31500.1|1|1) FN2379.SNP.7:18694613 chr07:018694613 0 W/18694613-18694613 FN2379 SNP C -> T AC=1;AN=192;BQB=0.617893;DP=2010;DP4=1804,14,23,0;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.5293e-14;MQSB=0.553242;RPB=0.448456;SGB=71.8591;VDB=0.751842;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.7:18696799 chr07:018696799 0 W/18696799-18696799 FN541-S Single Base Substitution A-T INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN4260-S.SNP.7:18696825 chr07:018696825 0 W/18696825-18696825 FN4260-S SNP G -> C AC=1;AN=170;BQB=0.934456;DP=2158;DP4=1155,948,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000463392;MQB=3.92078e-06;MQSB=0.976571;RPB=0.993947;SGB=43.4296;VDB=0.933997;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.7:18698321 chr07:018698321 0 W/18698321-18698321 FN-21 Single Base Substitution G-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN-83.SNP.7:18700058 chr07:018700058 0 W/18700058-18700058 FN-83 Single Base Substitution T-C INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN3507-S.SNP.7:18705578 chr07:018705578 0 W/18705578-18705578 FN3507-S SNP T -> C AC=1;AN=188;BQB=0.97395;DP=2711;DP4=1408,1223,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.19567e-08;MQSB=0.749164;RPB=0.958703;SGB=48.979;VDB=0.304789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.7:18712756 chr07:018712756 0 W/18712756-18712756 FN2080-S SNP T -> A AC=2;AN=168;BQB=0.194224;DP=3429;DP4=1829,1533,21,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.15708e-14;MQSB=1;RPB=0.433406;SGB=-232.588;VDB=0.073999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.7:18727299 chr07:018727299 0 W/18727299-18727299 FN3913-S SNP G -> C AC=1;AN=158;BQB=0.10911;DP=2642;DP4=1042,1458,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.35401e-06;MQSB=0.885651;RPB=0.643678;SGB=73.2838;VDB=0.766256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.7:18729214 chr07:018729214 0 W/18729214-18729214 FN3857-S SNP T -> C AC=1;AN=158;BQB=0.937622;DP=2326;DP4=1090,1165,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.83812e-07;MQSB=0.958719;RPB=0.766255;SGB=34.0735;VDB=0.676481;EFF=INTRON(MODIFIER||||413|LOC_Os07g31550|protein_coding|CODING|LOC_Os07g31550.1|2|1) FN1350-S.SNP.7:18735047 chr07:018735047 0 W/18735047-18735047 FN1350-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN1031-S.SNP.7:18735941 chr07:018735941 0 W/18735941-18735941 FN1031-S Single Base Substitution G-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2283.SNP.7:18739681 chr07:018739681 0 W/18739681-18739681 FN2283 SNP T -> C AC=1;AN=192;BQB=0.975145;DP=5214;DP4=2449,2520,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000191791;MQB=1.23611e-16;MQSB=0.999769;RPB=0.826486;SGB=117.676;VDB=0.878185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.7:18740733 chr07:018740733 0 W/18740733-18740733 FN2361 SNP G -> A AC=1;AN=192;BQB=0.759306;DP=4553;DP4=2201,1945,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.50642e-05;MQSB=0.000232208;RPB=0.109879;SGB=23.7852;VDB=0.00732343;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I181|296|LOC_Os07g31560|protein_coding|CODING|LOC_Os07g31560.1|2|1) FN-248.SNP.7:18741373 chr07:018741373 0 W/18741373-18741373 FN-248 Single Base Substitution C-T INTRON HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN-112.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN-112 Single Base Substitution G-T INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1024-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN1024-S Single Base Substitution G-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1089-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN1089-S Single Base Substitution G-T INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1728-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN1728-S SNP G -> T AC=1;AN=188;BQB=2.51053e-10;DP=3487;DP4=1258,2187,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000573559;MQB=6.60163e-06;MQSB=0.294653;RPB=0.398564;SGB=-11.74;VDB=0.587906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN2456 SNP G -> T AC=1;AN=200;BQB=6.5244e-09;DP=5577;DP4=2408,2671,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000358616;MQB=1.42635e-07;MQSB=0.618096;RPB=0.744942;SGB=-35.7104;VDB=0.767352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN2771-S SNP G -> T AC=2;AN=198;BQB=2.11873e-22;DP=4588;DP4=1949,2168,22,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00043592;MQB=3.71943e-24;MQSB=0.802892;RPB=0.338348;SGB=120.174;VDB=0.00170022;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN347-S Single Base Substitution G-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3482-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN3482-S SNP G -> T AC=2;AN=184;BQB=3.9099e-16;DP=3582;DP4=1847,1583,23,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000558347;MQB=1.82688e-21;MQSB=0.977359;RPB=0.463874;SGB=144.923;VDB=0.15322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN3766-S SNP G -> T AC=2;AN=190;BQB=1.56166e-11;DP=3295;DP4=1687,1461,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00060698;MQB=7.47218e-15;MQSB=0.954269;RPB=0.94921;SGB=27.4193;VDB=0.656162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN3897-S SNP G -> T AC=1;AN=158;BQB=4.6749e-10;DP=2860;DP4=1436,1308,8,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000699301;MQB=3.23697e-09;MQSB=0.84392;RPB=0.963591;SGB=57.6596;VDB=0.564263;EFF=INTERGENIC(MODIFIER||||||||||1) FN3946-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN3946-S SNP G -> T AC=2;AN=168;BQB=3.01316e-19;DP=3291;DP4=1595,1522,25,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000607718;MQB=1.37159e-10;MQSB=0.87153;RPB=0.065267;SGB=95.1092;VDB=0.458583;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN4176-S SNP G -> T AC=1;AN=170;BQB=0.000180305;DP=2787;DP4=1440,1258,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000717618;MQB=0.000143983;MQSB=0.998805;RPB=0.829242;SGB=34.5445;VDB=0.782802;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN474-S Single Base Substitution G-T INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN696-S Single Base Substitution G-T INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN768-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN768-S Single Base Substitution G-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN975-S.SNP.7:18745419 chr07:018745419 0 W/18745419-18745419 FN975-S Single Base Substitution G-T INTERGENIC HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1228-S.SNP.7:18746220 chr07:018746220 0 W/18746220-18746220 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2223-S.SNP.7:18752793 chr07:018752793 0 W/18752793-18752793 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.807983;DP=2860;DP4=1282,1212,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00489511;MQB=0.00284353;MQSB=0.039144;RPB=0.924669;SGB=33.8752;VDB=0.247169;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.7:18754503 chr07:018754503 0 W/18754503-18754503 FN672-S Single Base Substitution C-T INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2725-S.SNP.7:18754915 chr07:018754915 0 W/18754915-18754915 FN2725-S SNP G -> A AC=2;AN=200;BQB=0.258317;DP=4799;DP4=2368,2191,19,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.0112523;MQB=1.12617e-19;MQSB=0.505551;RPB=0.989659;SGB=178.604;VDB=0.970008;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.7:18765005 chr07:018765005 0 W/18765005-18765005 FN-172 Single Base Substitution T-C INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN4304-S.SNP.7:18768495 chr07:018768495 0 W/18768495-18768495 FN4304-S SNP T -> C AC=1;AN=170;BQB=0.386872;DP=2406;DP4=1106,1245,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000108359;MQSB=0.960561;RPB=0.285453;SGB=14.9986;VDB=0.698506;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.7:18769197 chr07:018769197 0 W/18769197-18769197 FN879-S Single Base Substitution A-T INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN879-S.SNP.7:18769201 chr07:018769201 0 W/18769201-18769201 FN879-S Single Base Substitution T-G INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3942-S.SNP.7:18771847 chr07:018771847 0 W/18771847-18771847 FN3942-S SNP T -> A AC=1;AN=168;BQB=0.781343;DP=2456;DP4=1366,923,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24482e-06;MQSB=0.890416;RPB=0.851692;SGB=38.1788;VDB=0.972929;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.7:18776473 chr07:018776473 0 W/18776473-18776473 FN-361 Single Base Substitution T-C INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN2650-S.SNP.7:18778482 chr07:018778482 0 W/18778482-18778482 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.981192;DP=4296;DP4=2218,1820,12,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000232775;MQB=2.90749e-10;MQSB=0.333477;RPB=0.415239;SGB=86.5007;VDB=0.452943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.7:18778485 chr07:018778485 0 W/18778485-18778485 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.994112;DP=4305;DP4=2198,1822,13,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.90349e-11;MQSB=0.497574;RPB=0.331051;SGB=61.9006;VDB=0.737188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.7:18779157 chr07:018779157 0 W/18779157-18779157 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.7429;DP=2966;DP4=1329,1401,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.8851e-08;MQSB=0.00145074;RPB=0.923309;SGB=64.5316;VDB=0.489776;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.7:18782918 chr07:018782918 0 W/18782918-18782918 FN879-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g31630 retrotransposon protein, putative, unclassified, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN879-S.SNP.7:18782919 chr07:018782919 0 W/18782919-18782919 FN879-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g31630 retrotransposon protein, putative, unclassified, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN1750-S.SNP.7:18784038 chr07:018784038 0 W/18784038-18784038 FN1750-S SNP A -> G AC=1;AN=188;BQB=0.735106;DP=1612;DP4=819,747,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0198511;MQB=0.915897;MQSB=0.00388287;RPB=0.591541;SGB=5.73019;VDB=0.702288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T1537A|1681|LOC_Os07g31630|protein_coding|CODING|LOC_Os07g31630.1|3|1) FN944-S.SNP.7:18795258 chr07:018795258 0 W/18795258-18795258 FN944-S Single Base Substitution C-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN982-S.SNP.7:18797515 chr07:018797515 0 W/18797515-18797515 FN982-S Single Base Substitution G-A INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2630-S.SNP.7:18804413 chr07:018804413 0 W/18804413-18804413 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.547034;DP=5026;DP4=2386,2356,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54086e-15;MQSB=0.999794;RPB=0.977777;SGB=104.921;VDB=0.756426;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K548|752|LOC_Os07g31650|protein_coding|CODING|LOC_Os07g31650.1|4|1) FN2235-S.SNP.7:18805345 chr07:018805345 0 W/18805345-18805345 FN2235-S SNP T -> C AC=1;AN=190;BQB=0.234834;DP=5065;DP4=2202,2493,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9747e-17;MQSB=0.389384;RPB=0.99555;SGB=25.8654;VDB=0.737455;EFF=INTRON(MODIFIER||||752|LOC_Os07g31650|protein_coding|CODING|LOC_Os07g31650.1|5|1) FN-335.SNP.7:18811758 chr07:018811758 0 W/18811758-18811758 FN-335 Single Base Substitution A-T INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-335.SNP.7:18811760 chr07:018811760 0 W/18811760-18811760 FN-335 Single Base Substitution A-T INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2385.SNP.7:18818640 chr07:018818640 0 W/18818640-18818640 FN2385 SNP C -> T AC=1;AN=192;BQB=0.319192;DP=5018;DP4=2513,2234,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.17759e-11;MQSB=0.765423;RPB=0.25321;SGB=44.3;VDB=0.216563;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.7:18832477 chr07:018832477 0 W/18832477-18832477 FN442-S Single Base Substitution C-T INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1295-S.SNP.7:18838113 chr07:018838113 0 W/18838113-18838113 FN1295-S Single Base Substitution A-T INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2220-S.SNP.7:18838598 chr07:018838598 0 W/18838598-18838598 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.946355;DP=5004;DP4=2314,2348,21,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.91751e-13;MQSB=5.28522e-08;RPB=0.832469;SGB=121.394;VDB=0.626217;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.7:18839014 chr07:018839014 0 W/18839014-18839014 FN4021-S SNP G -> A AC=2;AN=168;BQB=0.248669;DP=2657;DP4=1089,1423,17,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.83812e-14;MQSB=0.87674;RPB=0.829942;SGB=-10.2027;VDB=0.757606;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.7:18839092 chr07:018839092 0 W/18839092-18839092 FN2386 SNP T -> C AC=1;AN=192;BQB=0.121855;DP=4874;DP4=2316,2331,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.42433e-05;MQSB=0.998422;RPB=0.941983;SGB=7.3548;VDB=0.861354;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.7:18842625 chr07:018842625 0 W/18842625-18842625 W450-6-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3658-S.SNP.7:18844695 chr07:018844695 0 W/18844695-18844695 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.99363;DP=2981;DP4=1543,1312,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.56889e-05;MQSB=0.894251;RPB=0.67681;SGB=35.4339;VDB=0.211211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.7:18846251 chr07:018846251 0 W/18846251-18846251 FN1484-S Single Base Substitution T-C INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN4087-S.SNP.7:18847886 chr07:018847886 0 W/18847886-18847886 FN4087-S SNP G -> A AC=1;AN=182;BQB=0.810636;DP=3369;DP4=1707,1593,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.28955e-08;MQSB=0.976506;RPB=0.519372;SGB=62.1548;VDB=0.0252244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3802-S.SNP.7:18848204 chr07:018848204 0 W/18848204-18848204 FN3802-S SNP A -> T AC=1;AN=190;BQB=0.910578;DP=2769;DP4=1174,1452,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.25775e-10;MQSB=0.996763;RPB=0.65396;SGB=50.3161;VDB=0.822756;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.7:18848939 chr07:018848939 0 W/18848939-18848939 FN4104-S SNP C -> G AC=2;AN=182;BQB=0.90753;DP=2919;DP4=1098,1434,11,12;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=7.36887e-10;MQSB=0.2153;RPB=0.0673749;SGB=15.7256;VDB=0.904746;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.7:18853319 chr07:018853319 0 W/18853319-18853319 FN4179-S SNP G -> T AC=1;AN=170;BQB=0.993234;DP=2141;DP4=1050,1025,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.11518e-09;MQSB=0.99243;RPB=0.851329;SGB=34.878;VDB=0.594734;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S173*|454|LOC_Os07g31750|protein_coding|CODING|LOC_Os07g31750.1|4|1) FN4179-S.SNP.7:18853320 chr07:018853320 0 W/18853320-18853320 FN4179-S SNP A -> C AC=1;AN=170;BQB=0.889646;DP=2132;DP4=1009,932,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.90036e-09;MQSB=0.997481;RPB=0.884182;SGB=34.878;VDB=0.57234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Gcg|S173A|454|LOC_Os07g31750|protein_coding|CODING|LOC_Os07g31750.1|4|1) FN4016-S.SNP.7:18853725 chr07:018853725 0 W/18853725-18853725 FN4016-S SNP A -> T AC=1;AN=168;BQB=0.899614;DP=2243;DP4=1016,1044,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53167e-09;MQSB=0.939166;RPB=0.961019;SGB=2.75988;VDB=0.268087;EFF=INTRON(MODIFIER||||454|LOC_Os07g31750|protein_coding|CODING|LOC_Os07g31750.1|3|1) FN782-S.SNP.7:18853972 chr07:018853972 0 W/18853972-18853972 FN782-S Single Base Substitution T-C INTRON HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN_786-4-1.SNP.7:18858259 chr07:018858259 0 W/18858259-18858259 FN_786-4-1 Single Base Substitution C-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN4098-S.SNP.7:18863502 chr07:018863502 0 W/18863502-18863502 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.502244;DP=3259;DP4=1734,1435,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.52206e-10;MQSB=0.596819;RPB=0.714419;SGB=46.1603;VDB=0.86937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.7:18863525 chr07:018863525 0 W/18863525-18863525 FN2204-S SNP C -> A AC=1;AN=190;BQB=0.872047;DP=5147;DP4=2663,2152,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.24105e-06;MQSB=0.62327;RPB=0.437164;SGB=32.5467;VDB=0.657473;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.7:18867666 chr07:018867666 0 W/18867666-18867666 FN3770-S SNP C -> A AC=2;AN=190;BQB=0.559174;DP=1834;DP4=1262,502,6,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15313e-05;MQSB=0.999935;RPB=0.338209;SGB=32.5467;VDB=0.948633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.7:18877845 chr07:018877845 0 W/18877845-18877845 FN3580-S SNP T -> G AC=1;AN=188;BQB=0.471193;DP=2810;DP4=1278,1334,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.15921e-06;MQSB=0.970372;RPB=0.284289;SGB=20.9896;VDB=0.700181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.7:18880290 chr07:018880290 0 W/18880290-18880290 FN1630-S Single Base Substitution G-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1630-S.SNP.7:18880291 chr07:018880291 0 W/18880291-18880291 FN1630-S Single Base Substitution A-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1630-S.SNP.7:18880296 chr07:018880296 0 W/18880296-18880296 FN1630-S Single Base Substitution C-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3366-S.SNP.7:18880596 chr07:018880596 0 W/18880596-18880596 FN3366-S SNP T -> A AC=2;AN=184;BQB=0.711147;DP=2976;DP4=1423,1378,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.84068e-12;MQSB=0.983421;RPB=0.294284;SGB=125.613;VDB=0.335385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.7:18881206 chr07:018881206 0 W/18881206-18881206 FN1220-S Single Base Substitution C-T INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN594-S.SNP.7:18886275 chr07:018886275 0 W/18886275-18886275 FN594-S Single Base Substitution C-T INTERGENIC HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1040-S.SNP.7:18886595 chr07:018886595 0 W/18886595-18886595 FN1040-S Single Base Substitution G-A INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1647-S.SNP.7:18888884 chr07:018888884 0 W/18888884-18888884 FN1647-S Single Base Substitution T-A INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2597-S.SNP.7:18889974 chr07:018889974 0 W/18889974-18889974 FN2597-S SNP A -> G AC=2;AN=198;BQB=0.929539;DP=4157;DP4=1914,2084,11,16;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00408949;MQB=1.20141e-15;MQSB=0.850468;RPB=0.417551;SGB=55.2955;VDB=0.271622;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.7:18889975 chr07:018889975 0 W/18889975-18889975 FN2597-S SNP A -> T AC=2;AN=198;BQB=0.683795;DP=4164;DP4=1924,2069,12,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00432277;MQB=3.90643e-16;MQSB=0.878483;RPB=0.847423;SGB=-6.09922;VDB=0.719091;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.7:18901965 chr07:018901965 0 W/18901965-18901965 FN3774-S SNP C -> A AC=1;AN=190;BQB=0.10649;DP=2670;DP4=1278,1283,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000688085;MQSB=0.991268;RPB=0.96618;SGB=15.9981;VDB=0.382678;EFF=INTRON(MODIFIER||||911|LOC_Os07g31800|protein_coding|CODING|LOC_Os07g31800.1|1|1) FN2731-S.SNP.7:18906114 chr07:018906114 0 W/18906114-18906114 FN2731-S SNP T -> A AC=2;AN=200;BQB=0.730627;DP=5259;DP4=2450,2572,28,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.02056e-32;MQSB=0.954917;RPB=0.0312956;SGB=247.682;VDB=0.529074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.7:18906855 chr07:018906855 0 W/18906855-18906855 FN2706-S SNP A -> T AC=1;AN=200;BQB=0.101222;DP=5244;DP4=2268,2728,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14583e-08;MQSB=0.935561;RPB=0.418459;SGB=-11.8999;VDB=0.493794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.7:18909743 chr07:018909743 0 W/18909743-18909743 FN2660-S SNP C -> A AC=1;AN=200;BQB=0.994563;DP=4369;DP4=2092,2093,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.60249e-05;MQSB=0.930247;RPB=0.279327;SGB=45.0543;VDB=0.435866;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.7:18912067 chr07:018912067 0 W/18912067-18912067 FN-93 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g31830 GTPase activating protein, putative, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3510-S.SNP.7:18916916 chr07:018916916 0 W/18916916-18916916 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.938182;DP=2536;DP4=1235,1247,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.32281e-07;MQSB=0.995735;RPB=0.215105;SGB=32.441;VDB=0.246406;EFF=INTRON(MODIFIER||||638|LOC_Os07g31840|protein_coding|CODING|LOC_Os07g31840.1|4|1) FN3510-S.SNP.7:18916917 chr07:018916917 0 W/18916917-18916917 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.982174;DP=2542;DP4=1223,1238,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.44196e-08;MQSB=0.981339;RPB=0.342831;SGB=48.979;VDB=0.180121;EFF=INTRON(MODIFIER||||638|LOC_Os07g31840|protein_coding|CODING|LOC_Os07g31840.1|4|1) FN3510-S.SNP.7:18916918 chr07:018916918 0 W/18916918-18916918 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.922651;DP=2549;DP4=1238,1251,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.46895e-08;MQSB=0.991953;RPB=0.761511;SGB=20.9896;VDB=0.537562;EFF=INTRON(MODIFIER||||638|LOC_Os07g31840|protein_coding|CODING|LOC_Os07g31840.1|4|1) FN2729-S.SNP.7:18921814 chr07:018921814 0 W/18921814-18921814 FN2729-S SNP G -> T AC=2;AN=200;BQB=0.640495;DP=4922;DP4=2024,2591,24,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.27854e-27;MQSB=0.877548;RPB=0.276814;SGB=67.2761;VDB=0.957638;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.7:18922622 chr07:018922622 0 W/18922622-18922622 FN-210 Single Base Substitution G-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. W472-5-1.SNP.7:18923052 chr07:018923052 0 W/18923052-18923052 W472-5-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN889-S.SNP.7:18925970 chr07:018925970 0 W/18925970-18925970 FN889-S Single Base Substitution T-C INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN943-S.SNP.7:18930255 chr07:018930255 0 W/18930255-18930255 FN943-S Single Base Substitution C-T INTRON HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN1058-S.SNP.7:18932209 chr07:018932209 0 W/18932209-18932209 FN1058-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN4279-S.SNP.7:18936252 chr07:018936252 0 W/18936252-18936252 FN4279-S SNP A -> G AC=1;AN=170;BQB=0.933665;DP=2400;DP4=937,1136,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0845833;MQB=0.998838;MQSB=0;RPB=0.933117;SGB=10.1134;VDB=0.268014;EFF=INTRON(MODIFIER||||51|LOC_Os07g31870|protein_coding|CODING|LOC_Os07g31870.1|1|1) FN466-S.SNP.7:18936526 chr07:018936526 0 W/18936526-18936526 FN466-S Single Base Substitution G-T INTRON HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1020-S.SNP.7:18940986 chr07:018940986 0 W/18940986-18940986 FN1020-S Single Base Substitution C-A INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN862-S.SNP.7:18941136 chr07:018941136 0 W/18941136-18941136 FN862-S Single Base Substitution G-A INTRON HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN3339-S.SNP.7:18953343 chr07:018953343 0 W/18953343-18953343 FN3339-S SNP T -> A AC=1;AN=184;BQB=0.99965;DP=2761;DP4=1212,1452,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2086e-06;MQSB=0.993964;RPB=0.583619;SGB=25.1826;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN-23.SNP.7:18960558 chr07:018960558 0 W/18960558-18960558 FN-23 Single Base Substitution A-T INTRON Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN2255-S.SNP.7:18961334 chr07:018961334 0 W/18961334-18961334 FN2255-S SNP C -> T AC=1;AN=190;BQB=0.764543;DP=4648;DP4=2157,2164,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00193632;MQB=0.271776;MQSB=3.03054e-22;RPB=0.0260741;SGB=-14.3297;VDB=0.270624;EFF=INTRON(MODIFIER||||566|LOC_Os07g31884|protein_coding|CODING|LOC_Os07g31884.1|1|1) FN2687-S.SNP.7:18963511 chr07:018963511 0 W/18963511-18963511 FN2687-S SNP G -> C AC=1;AN=200;BQB=0.840008;DP=5085;DP4=2254,2551,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78357e-06;MQSB=0.976091;RPB=0.919647;SGB=36.6644;VDB=0.850289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.7:18965286 chr07:018965286 0 W/18965286-18965286 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.964109;DP=2162;DP4=718,1325,1,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.43443e-05;MQSB=0.290348;RPB=0.996958;SGB=30.6558;VDB=0.987561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.7:18965796 chr07:018965796 0 W/18965796-18965796 FN1566-S Single Base Substitution A-C INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN946-S.SNP.7:18968460 chr07:018968460 0 W/18968460-18968460 FN946-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g31900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN946-S.SNP.7:18968461 chr07:018968461 0 W/18968461-18968461 FN946-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g31900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2665-S.SNP.7:18978586 chr07:018978586 0 W/18978586-18978586 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.374261;DP=4750;DP4=1702,2669,6,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000842105;MQB=2.02531e-05;MQSB=0.472094;RPB=0.427065;SGB=63.4749;VDB=0.515242;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.7:18978982 chr07:018978982 0 W/18978982-18978982 FN2136-S SNP G -> C AC=1;AN=168;BQB=0.992595;DP=2784;DP4=1391,1359,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.154454;MQB=0.873306;MQSB=0;RPB=0.934333;SGB=34.3388;VDB=0.829069;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN-153 Single Base Substitution A-T INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN-203.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN-203 Single Base Substitution A-T INTERGENIC HOMO SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-292.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN-292 Single Base Substitution A-T INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-388.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN-388 Single Base Substitution A-T INTERGENIC HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN-55.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN-55 Single Base Substitution A-T INTERGENIC HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN1123-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN1123-S Single Base Substitution A-T INTERGENIC HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN1239-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN1239-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1463-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN1463-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1553-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN1553-S Single Base Substitution A-T INTERGENIC Homo SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2153-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN2153-S SNP A -> T AC=1;AN=168;BQB=0.0271583;DP=3951;DP4=1816,2086,17,19;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.07523e-05;MQSB=0.533776;RPB=0.929764;SGB=-128.892;VDB=0.37348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2280-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN2280-S SNP A -> T AC=2;AN=190;BQB=0.839815;DP=5033;DP4=2331,2363,22,13;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.11852e-14;MQSB=0.850334;RPB=0.9985;SGB=114.286;VDB=0.163589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN2349 SNP A -> T AC=2;AN=192;BQB=0.737503;DP=5157;DP4=2328,2517,20,23;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=1.3823e-14;MQSB=0.752572;RPB=0.491552;SGB=48.0279;VDB=0.84476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3488-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN3488-S SNP A -> T AC=2;AN=184;BQB=0.913731;DP=2582;DP4=1086,1403,11,5;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=4.05028e-07;MQSB=0.794204;RPB=0.93258;SGB=66.8296;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN355-S Single Base Substitution A-T INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3738-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN3738-S SNP A -> T AC=1;AN=190;BQB=0.912764;DP=2810;DP4=1216,1481,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.38964e-05;MQSB=0.99761;RPB=0.9324;SGB=53.6492;VDB=0.129975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN3892-S SNP A -> T AC=2;AN=158;BQB=0.997213;DP=2323;DP4=989,1253,8,10;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=5.83013e-09;MQSB=0.9972;RPB=0.834086;SGB=73.2838;VDB=0.64913;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN479-S Single Base Substitution A-T INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN519-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN519-S Single Base Substitution A-T INTERGENIC HOMO SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN698-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN698-S Single Base Substitution A-T INTERGENIC HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN710-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN710-S Single Base Substitution A-T INTERGENIC HOMO SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN792-S.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN792-S Single Base Substitution A-T INTERGENIC HOMO SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN_N1-202-3.SNP.7:18984209 chr07:018984209 0 W/18984209-18984209 FN_N1-202-3 Single Base Substitution A-T Homo SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN-90.SNP.7:18985601 chr07:018985601 0 W/18985601-18985601 FN-90 Single Base Substitution C-G INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1739-S.SNP.7:18986813 chr07:018986813 0 W/18986813-18986813 FN1739-S SNP G -> C AC=2;AN=188;BQB=0.040853;DP=3419;DP4=1803,1549,27,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.97534e-18;MQSB=0.940767;RPB=0.511266;SGB=-207.766;VDB=0.769738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.7:18987193 chr07:018987193 0 W/18987193-18987193 FN3869-S SNP A -> G AC=2;AN=158;BQB=0.381705;DP=2492;DP4=1091,1085,10,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.71591e-13;MQSB=0.89033;RPB=0.121115;SGB=74.5068;VDB=0.103805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.7:18997728 chr07:018997728 0 W/18997728-18997728 FN1099-S Single Base Substitution T-C INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN4234-S.SNP.7:18998620 chr07:018998620 0 W/18998620-18998620 FN4234-S SNP C -> T AC=2;AN=170;BQB=0.918221;DP=2300;DP4=1112,1120,13,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.57555e-11;MQSB=0.843119;RPB=0.989362;SGB=74.528;VDB=0.829467;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.7:19006643 chr07:019006643 0 W/19006643-19006643 FN1492-S Single Base Substitution G-A INTRON HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN-279.SNP.7:19007593 chr07:019007593 0 W/19007593-19007593 FN-279 Single Base Substitution A-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2169-S.SNP.7:19007593 chr07:019007593 0 W/19007593-19007593 FN2169-S SNP A -> T AC=1;AN=168;BQB=0.104078;DP=3698;DP4=1861,1799,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.23768e-06;MQSB=0.913465;RPB=0.694219;SGB=-39.5049;VDB=0.183258;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.7:19009788 chr07:019009788 0 W/19009788-19009788 FN-176 Single Base Substitution T-A INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN-72.SNP.7:19011086 chr07:019011086 0 W/19011086-19011086 FN-72 Single Base Substitution C-T INTERGENIC HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN-314.SNP.7:19016635 chr07:019016635 0 W/19016635-19016635 FN-314 Single Base Substitution C-G INTERGENIC HOMO SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2233-S.SNP.7:19019728 chr07:019019728 0 W/19019728-19019728 FN2233-S SNP T -> A AC=1;AN=190;BQB=0.429171;DP=4338;DP4=2211,1778,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000691563;MQB=7.47372e-05;MQSB=0.0973894;RPB=0.990283;SGB=4.11112;VDB=0.845537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K520M|798|LOC_Os07g31980|protein_coding|CODING|LOC_Os07g31980.1|4|1) FN3503-S.SNP.7:19020674 chr07:019020674 0 W/19020674-19020674 FN3503-S SNP T -> C AC=2;AN=188;BQB=0.923334;DP=2985;DP4=1491,1410,8,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00234506;MQB=9.42645e-10;MQSB=0.73933;RPB=0.935321;SGB=57.244;VDB=0.973874;EFF=INTRON(MODIFIER||||798|LOC_Os07g31980|protein_coding|CODING|LOC_Os07g31980.1|1|1) FN762-S.SNP.7:19021057 chr07:019021057 0 W/19021057-19021057 FN762-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g31980 retrotransposon protein, putative, unclassified, expressed SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1042-S.SNP.7:19022988 chr07:019022988 0 W/19022988-19022988 FN1042-S Single Base Substitution A-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1025-S.SNP.7:19040494 chr07:019040494 0 W/19040494-19040494 FN1025-S Single Base Substitution C-A INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-307.SNP.7:19043941 chr07:019043941 0 W/19043941-19043941 FN-307 Single Base Substitution T-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-164.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN-164 Single Base Substitution T-C INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-231.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN-231 Single Base Substitution T-C INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN-243 Single Base Substitution T-C INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-69.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN-69 Single Base Substitution T-C INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1104-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN1104-S Single Base Substitution T-C INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1414-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN1414-S Single Base Substitution T-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1559-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN1559-S Single Base Substitution T-C INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1726-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN1726-S SNP T -> C AC=2;AN=188;BQB=0.978189;DP=4342;DP4=2299,1969,35,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.30777e-31;MQSB=0.983531;RPB=0.774873;SGB=74.9865;VDB=0.0636397;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN2141-S SNP T -> C AC=1;AN=168;BQB=0.33203;DP=4187;DP4=2080,2071,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.60577e-13;MQSB=0.999437;RPB=0.999542;SGB=-11.0644;VDB=0.822309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN2342 SNP T -> C AC=2;AN=192;BQB=0.976487;DP=5286;DP4=2455,2541,16,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.939e-23;MQSB=0.846136;RPB=0.966866;SGB=121.76;VDB=0.780567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN3484-S SNP T -> C AC=2;AN=184;BQB=0.707243;DP=2769;DP4=1304,1353,16,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.92493e-15;MQSB=0.999867;RPB=0.653804;SGB=61.1019;VDB=0.173695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN3911-S SNP T -> C AC=2;AN=158;BQB=0.938354;DP=2578;DP4=1157,1311,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.66157e-14;MQSB=0.936045;RPB=0.695705;SGB=77.8763;VDB=0.649584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN3965-S SNP T -> C AC=2;AN=168;BQB=0.99958;DP=2899;DP4=1324,1432,16,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.2385e-23;MQSB=0.988092;RPB=0.420944;SGB=137.672;VDB=0.0203214;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN4089-S SNP T -> C AC=1;AN=182;BQB=0.988256;DP=2810;DP4=1288,1445,1,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.71332e-09;MQSB=0.968892;RPB=0.263709;SGB=57.644;VDB=0.474446;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN460-S Single Base Substitution T-C INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN724-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN724-S Single Base Substitution T-C INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN798-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN798-S Single Base Substitution T-C INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN873-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN873-S Single Base Substitution T-C INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN932-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN932-S Single Base Substitution T-C INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN961-S.SNP.7:19044128 chr07:019044128 0 W/19044128-19044128 FN961-S Single Base Substitution T-C INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2739-S.SNP.7:19048018 chr07:019048018 0 W/19048018-19048018 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.782606;DP=4799;DP4=2426,2130,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52312e-16;MQSB=0.997115;RPB=0.999066;SGB=97.9523;VDB=0.854446;EFF=UTR_3_PRIME(MODIFIER||719||474|LOC_Os07g32020|protein_coding|CODING|LOC_Os07g32020.1|1|1) FN3838-S.SNP.7:19050411 chr07:019050411 0 W/19050411-19050411 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.476966;DP=2500;DP4=1285,1109,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000497524;MQSB=0.76149;RPB=0.483675;SGB=28.9929;VDB=0.361713;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.7:19055779 chr07:019055779 0 W/19055779-19055779 FN927-S Single Base Substitution A-C INTRON HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2134-S.SNP.7:19063756 chr07:019063756 0 W/19063756-19063756 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.895892;DP=3112;DP4=1303,1746,17,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91221e-11;MQSB=0.758394;RPB=0.972037;SGB=-44.6276;VDB=0.967482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.7:19065533 chr07:019065533 0 W/19065533-19065533 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.99976;DP=3312;DP4=1763,1505,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.80969e-14;MQSB=0.954855;RPB=0.858169;SGB=-42.845;VDB=0.643316;EFF=INTRON(MODIFIER||||191|LOC_Os07g32070|protein_coding|CODING|LOC_Os07g32070.1|1|1) FN1658-S.SNP.7:19065535 chr07:019065535 0 W/19065535-19065535 FN1658-S SNP C -> A AC=2;AN=188;BQB=0.832769;DP=3278;DP4=1751,1483,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.05905e-14;MQSB=0.939879;RPB=0.692948;SGB=-118.378;VDB=0.703042;EFF=INTRON(MODIFIER||||191|LOC_Os07g32070|protein_coding|CODING|LOC_Os07g32070.1|1|1) FN3667-S.SNP.7:19065969 chr07:019065969 0 W/19065969-19065969 FN3667-S SNP A -> G AC=1;AN=190;BQB=0.940183;DP=2978;DP4=1323,1544,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20163e-05;MQSB=0.989647;RPB=0.86884;SGB=39.9877;VDB=0.913584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.7:19068015 chr07:019068015 0 W/19068015-19068015 FN3652-S SNP G -> T AC=1;AN=190;BQB=0.879944;DP=2114;DP4=1004,1030,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.02708e-08;MQSB=0.997278;RPB=0.244257;SGB=49.0954;VDB=0.211747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.7:19070611 chr07:019070611 0 W/19070611-19070611 FN2592-S SNP C -> T AC=1;AN=198;BQB=0.611396;DP=3957;DP4=2027,1728,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.06917e-10;MQSB=0.383497;RPB=0.547375;SGB=58.1246;VDB=0.843242;EFF=INTRON(MODIFIER||||492|LOC_Os07g32090|protein_coding|CODING|LOC_Os07g32090.1|1|1) FN731-S.SNP.7:19074179 chr07:019074179 0 W/19074179-19074179 FN731-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os07g32100 expressed protein SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN1762-S.SNP.7:19081972 chr07:019081972 0 W/19081972-19081972 FN1762-S SNP A -> G AC=1;AN=188;BQB=0.993396;DP=4139;DP4=2121,1985,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.13323e-07;MQSB=0.961582;RPB=0.942954;SGB=23.5329;VDB=0.574831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.7:19095687 chr07:019095687 0 W/19095687-19095687 FN2410 SNP C -> A AC=2;AN=200;BQB=0.799594;DP=4523;DP4=2015,2126,28,40;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.81952e-36;MQSB=0.53412;RPB=0.995249;SGB=224.763;VDB=0.638884;EFF=INTRON(MODIFIER||||156|LOC_Os07g32150|protein_coding|CODING|LOC_Os07g32150.1|1|1) W138-2-1.SNP.7:19106180 chr07:019106180 0 W/19106180-19106180 W138-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN932-S.SNP.7:19120849 chr07:019120849 0 W/19120849-19120849 FN932-S Single Base Substitution A-T INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN1442-S.SNP.7:19123782 chr07:019123782 0 W/19123782-19123782 FN1442-S Single Base Substitution G-C INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1519-S.SNP.7:19127480 chr07:019127480 0 W/19127480-19127480 FN1519-S Single Base Substitution C-A INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1372-S.SNP.7:19131388 chr07:019131388 0 W/19131388-19131388 FN1372-S Single Base Substitution G-A INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN-192.SNP.7:19132932 chr07:019132932 0 W/19132932-19132932 FN-192 Single Base Substitution A-G INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN935-S.SNP.7:19143226 chr07:019143226 0 W/19143226-19143226 FN935-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g32220 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2691-S.SNP.7:19151175 chr07:019151175 0 W/19151175-19151175 FN2691-S SNP A -> T AC=1;AN=200;BQB=0.964853;DP=4709;DP4=2100,2413,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3012e-08;MQSB=0.999235;RPB=0.881631;SGB=54.2646;VDB=0.965934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.7:19152813 chr07:019152813 0 W/19152813-19152813 FN1154-S Single Base Substitution A-C INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2687-S.SNP.7:19153135 chr07:019153135 0 W/19153135-19153135 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.846732;DP=5005;DP4=2496,2220,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.61836e-09;MQSB=0.983209;RPB=0.695546;SGB=58.8698;VDB=0.49615;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN-164 Single Base Substitution C-T INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-231.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN-231 Single Base Substitution C-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN-243 Single Base Substitution C-T INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-69.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN-69 Single Base Substitution C-T INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1104-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN1104-S Single Base Substitution C-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1414-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1559-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN1559-S Single Base Substitution C-T INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1726-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN1726-S SNP C -> T AC=2;AN=188;BQB=0.898535;DP=2498;DP4=1192,1244,15,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.94039e-17;MQSB=0.699893;RPB=0.532169;SGB=99.7635;VDB=0.156857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN2141-S SNP C -> T AC=1;AN=168;BQB=0.274901;DP=2890;DP4=1425,1404,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.20477e-06;MQSB=0.917999;RPB=0.998682;SGB=-15.8033;VDB=0.839432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN2342 SNP C -> T AC=2;AN=192;BQB=0.501218;DP=4545;DP4=2310,1912,20,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000220022;MQB=5.19169e-17;MQSB=0.879345;RPB=0.772784;SGB=67.3792;VDB=0.456932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN3484-S SNP C -> T AC=2;AN=184;BQB=0.887228;DP=2771;DP4=1521,1171,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.27743e-14;MQSB=0.727957;RPB=0.853412;SGB=103.004;VDB=0.119203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN3911-S SNP C -> T AC=2;AN=158;BQB=0.869869;DP=2228;DP4=1219,930,14,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.74998e-12;MQSB=0.866926;RPB=0.875734;SGB=77.6532;VDB=0.437779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN3965-S SNP C -> T AC=2;AN=168;BQB=0.534041;DP=2382;DP4=1312,930,34,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.86798e-24;MQSB=0.890185;RPB=0.989328;SGB=145.052;VDB=0.190251;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN4089-S SNP C -> T AC=1;AN=182;BQB=0.987012;DP=2813;DP4=1582,1179,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.72527e-07;MQSB=0.914995;RPB=0.570955;SGB=48.6223;VDB=0.110322;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN460-S Single Base Substitution C-T INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN724-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN724-S Single Base Substitution C-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN798-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN798-S Single Base Substitution C-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN873-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN932-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN932-S Single Base Substitution C-T INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN961-S.SNP.7:19156138 chr07:019156138 0 W/19156138-19156138 FN961-S Single Base Substitution C-T INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. W360-2S-2.SNP.7:19156399 chr07:019156399 0 W/19156399-19156399 W360-2S-2 Single Base Substitution A-G INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1067-S.SNP.7:19167801 chr07:019167801 0 W/19167801-19167801 FN1067-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g32250 retrotransposon protein, putative, unclassified, expressed SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2355.SNP.7:19170253 chr07:019170253 0 W/19170253-19170253 FN2355 SNP T -> C AC=1;AN=192;BQB=0.0659261;DP=4998;DP4=2565,2047,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00160064;MQB=1.96335e-05;MQSB=0.00675477;RPB=0.856584;SGB=22.9983;VDB=0.572098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F914S|1988|LOC_Os07g32250|protein_coding|CODING|LOC_Os07g32250.1|3|1) FN1024-S.SNP.7:19173644 chr07:019173644 0 W/19173644-19173644 FN1024-S Single Base Substitution C-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2201-S.SNP.7:19174661 chr07:019174661 0 W/19174661-19174661 FN2201-S SNP G -> T AC=1;AN=190;BQB=0.98048;DP=3211;DP4=1441,1504,1,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00498287;MQB=0.0142609;MQSB=0.888393;RPB=0.260001;SGB=13.4442;VDB=0.534701;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A765|888|LOC_Os07g32260|protein_coding|CODING|LOC_Os07g32260.1|4|1) FN3800-S.SNP.7:19176329 chr07:019176329 0 W/19176329-19176329 FN3800-S SNP G -> T AC=1;AN=190;BQB=0.997604;DP=2809;DP4=1367,1325,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.242791;MQB=0.908144;MQSB=0;RPB=0.893188;SGB=57.4238;VDB=0.900452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A318D|888|LOC_Os07g32260|protein_coding|CODING|LOC_Os07g32260.1|2|1) FN4140-S.SNP.7:19176446 chr07:019176446 0 W/19176446-19176446 FN4140-S SNP G -> A AC=2;AN=170;BQB=0.999958;DP=2267;DP4=1134,1061,14,6;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.000882223;MQB=0.00375142;MQSB=0.356205;RPB=0.948705;SGB=58.9766;VDB=0.361413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A279V|888|LOC_Os07g32260|protein_coding|CODING|LOC_Os07g32260.1|2|1) FN2609-S.SNP.7:19179304 chr07:019179304 0 W/19179304-19179304 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.45203;DP=4185;DP4=1948,1960,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17717e-09;MQSB=0.354301;RPB=0.59926;SGB=90.4807;VDB=0.535325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.7:19201322 chr07:019201322 0 W/19201322-19201322 FN1333-S Single Base Substitution T-G INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3477-S.SNP.7:19203306 chr07:019203306 0 W/19203306-19203306 FN3477-S SNP C -> T AC=1;AN=184;BQB=0.845578;DP=2250;DP4=1175,1009,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.01965e-05;MQSB=0.98566;RPB=0.95864;SGB=35.1773;VDB=0.734099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.7:19214769 chr07:019214769 0 W/19214769-19214769 FN2195-S SNP G -> A AC=1;AN=190;BQB=0.994621;DP=4108;DP4=1645,2120,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.00730282;MQB=0.207211;MQSB=1.61227e-09;RPB=0.659517;SGB=39.9877;VDB=0.286863;EFF=INTRON(MODIFIER||||1890|LOC_Os07g32310|protein_coding|CODING|LOC_Os07g32310.1|2|1) FN3364-S.SNP.7:19215266 chr07:019215266 0 W/19215266-19215266 FN3364-S SNP G -> T AC=1;AN=184;BQB=0.900793;DP=3383;DP4=1545,1765,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0180313;MQB=0.0113144;MQSB=0.0122359;RPB=0.810913;SGB=39.2697;VDB=0.399491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G1166C|1890|LOC_Os07g32310|protein_coding|CODING|LOC_Os07g32310.1|3|1) FN3717-S.SNP.7:19218137 chr07:019218137 0 W/19218137-19218137 FN3717-S SNP G -> A AC=2;AN=190;BQB=0.979447;DP=2363;DP4=1081,1198,10,7;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=0.016342;MQSB=4.58462e-12;RPB=0.821165;SGB=50.3161;VDB=0.202811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.7:19219972 chr07:019219972 0 W/19219972-19219972 FN3400-S SNP T -> G AC=1;AN=184;BQB=0.989517;DP=4290;DP4=1761,2347,17,12;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0034965;MQB=1.78421e-14;MQSB=0.336558;RPB=0.981237;SGB=58.5801;VDB=0.399758;EFF=INTRON(MODIFIER||||1039|LOC_Os07g32320|protein_coding|CODING|LOC_Os07g32320.1|1|1) FN1449-S.SNP.7:19220710 chr07:019220710 0 W/19220710-19220710 FN1449-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN888-S.SNP.7:19224138 chr07:019224138 0 W/19224138-19224138 FN888-S Single Base Substitution T-C INTRON HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN4272-S.SNP.7:19224789 chr07:019224789 0 W/19224789-19224789 FN4272-S SNP T -> C AC=1;AN=170;BQB=0.630643;DP=2745;DP4=1629,994,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000364299;MQB=2.10889e-07;MQSB=0.998241;RPB=0.866572;SGB=17.4413;VDB=0.808177;EFF=SPLICE_SITE_REGION(LOW||||797|LOC_Os07g32340|protein_coding|CODING|LOC_Os07g32340.1|1|1),SPLICE_SITE_REGION(LOW||||797|LOC_Os07g32340|protein_coding|CODING|LOC_Os07g32340.2|1|1),UTR_5_PRIME(MODIFIER||80||797|LOC_Os07g32340|protein_coding|CODING|LOC_Os07g32340.3|2|1),INTRON(MODIFIER||||797|LOC_Os07g32340|protein_coding|CODING|LOC_Os07g32340.1|1|1),INTRON(MODIFIER||||797|LOC_Os07g32340|protein_coding|CODING|LOC_Os07g32340.2|1|1) FN1211-S.SNP.7:19234667 chr07:019234667 0 W/19234667-19234667 FN1211-S Single Base Substitution G-T INTRON HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1211-S.SNP.7:19234669 chr07:019234669 0 W/19234669-19234669 FN1211-S Single Base Substitution A-T INTRON HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3478-S.SNP.7:19266452 chr07:019266452 0 W/19266452-19266452 FN3478-S SNP C -> A AC=1;AN=184;BQB=0.9611;DP=2153;DP4=1076,1024,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75603e-06;MQSB=0.724464;RPB=0.928263;SGB=28.7043;VDB=0.988695;EFF=INTRON(MODIFIER||||530|LOC_Os07g32400|protein_coding|CODING|LOC_Os07g32400.1|1|1),INTRON(MODIFIER||||520|LOC_Os07g32400|protein_coding|CODING|LOC_Os07g32400.2|1|1),INTRON(MODIFIER||||426|LOC_Os07g32400|protein_coding|CODING|LOC_Os07g32400.3|1|1) FN1263-S.SNP.7:19280151 chr07:019280151 0 W/19280151-19280151 FN1263-S Single Base Substitution G-A INTRON HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3599-S.SNP.7:19292417 chr07:019292417 0 W/19292417-19292417 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.64278;DP=3040;DP4=1670,1305,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000140485;MQSB=0.981058;RPB=0.860578;SGB=39.8925;VDB=0.392568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A897T|1317|LOC_Os07g32430|protein_coding|CODING|LOC_Os07g32430.1|16|1) FN798-S.SNP.7:19304568 chr07:019304568 0 W/19304568-19304568 FN798-S Single Base Substitution C-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2153-S.SNP.7:19311589 chr07:019311589 0 W/19311589-19311589 FN2153-S SNP T -> C AC=1;AN=168;BQB=0.103349;DP=3900;DP4=1881,1972,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.71761e-08;MQSB=0.942234;RPB=0.890941;SGB=-39.5049;VDB=0.902618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q156R|348|LOC_Os07g32460|protein_coding|CODING|LOC_Os07g32460.1|5|1) FN_776-5-1.SNP.7:19315707 chr07:019315707 0 W/19315707-19315707 FN_776-5-1 Single Base Substitution C-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2442.SNP.7:19317109 chr07:019317109 0 W/19317109-19317109 FN2442 SNP A -> G AC=1;AN=200;BQB=0.849164;DP=5615;DP4=2687,2552,7,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000178094;MQB=7.07002e-09;MQSB=8.66598e-16;RPB=0.956143;SGB=65.5058;VDB=0.343565;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.7:19321840 chr07:019321840 0 W/19321840-19321840 FN2691-S SNP A -> T AC=2;AN=200;BQB=0.850038;DP=4387;DP4=2208,1992,28,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12892e-28;MQSB=0.967284;RPB=0.155666;SGB=131.087;VDB=0.672627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1645-S.SNP.7:19328875 chr07:019328875 0 W/19328875-19328875 FN1645-S Single Base Substitution G-A INTRON HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1097-S.SNP.7:19335088 chr07:019335088 0 W/19335088-19335088 FN1097-S Single Base Substitution A-T INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2475.SNP.7:19341260 chr07:019341260 0 W/19341260-19341260 FN2475 SNP A -> G AC=1;AN=200;BQB=0.311701;DP=5381;DP4=2426,2713,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25274e-08;MQSB=0.422347;RPB=0.993927;SGB=77.2904;VDB=0.904899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.7:19341461 chr07:019341461 0 W/19341461-19341461 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3842-S.SNP.7:19346095 chr07:019346095 0 W/19346095-19346095 FN3842-S SNP T -> C AC=1;AN=190;BQB=0.977107;DP=2845;DP4=1500,1202,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.5823e-06;MQSB=0.850423;RPB=0.991933;SGB=28.9929;VDB=0.897907;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.7:19346811 chr07:019346811 0 W/19346811-19346811 W416-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN670-S.SNP.7:19349358 chr07:019349358 0 W/19349358-19349358 FN670-S Single Base Substitution A-T INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3510-S.SNP.7:19375826 chr07:019375826 0 W/19375826-19375826 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.883763;DP=2212;DP4=1334,832,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00180832;MQB=2.3198e-06;MQSB=0.92232;RPB=0.473365;SGB=48.979;VDB=0.395594;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.7:19377178 chr07:019377178 0 W/19377178-19377178 FN941-S Single Base Substitution A-T INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1732-S.SNP.7:19377719 chr07:019377719 0 W/19377719-19377719 FN1732-S SNP G -> A AC=1;AN=188;BQB=0.33096;DP=3784;DP4=1861,1882,21,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.16603e-09;MQSB=0.984639;RPB=0.732782;SGB=-73.5561;VDB=0.913178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2271-S.SNP.7:19382144 chr07:019382144 0 W/19382144-19382144 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.818891;DP=5279;DP4=2492,2487,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78528e-12;MQSB=0.955009;RPB=0.517939;SGB=41.5369;VDB=0.0516381;EFF=INTRON(MODIFIER||||859|LOC_Os07g32530|protein_coding|CODING|LOC_Os07g32530.1|5|1) FN1488-S.SNP.7:19384498 chr07:019384498 0 W/19384498-19384498 FN1488-S Single Base Substitution C-T INTRON Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN448-S.SNP.7:19390031 chr07:019390031 0 W/19390031-19390031 FN448-S Single Base Substitution T-A INTERGENIC HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1448-S.SNP.7:19394143 chr07:019394143 0 W/19394143-19394143 FN1448-S Single Base Substitution T-G INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN473-S.SNP.7:19398946 chr07:019398946 0 W/19398946-19398946 FN473-S Single Base Substitution A-G INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3697-S.SNP.7:19399080 chr07:019399080 0 W/19399080-19399080 FN3697-S SNP T -> A AC=1;AN=190;BQB=0.99116;DP=2856;DP4=1282,1454,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78449e-05;MQSB=0.994907;RPB=0.711001;SGB=39.9877;VDB=0.251186;EFF=INTERGENIC(MODIFIER||||||||||1) FN791-S.SNP.7:19404910 chr07:019404910 0 W/19404910-19404910 FN791-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN-225.SNP.7:19414242 chr07:019414242 0 W/19414242-19414242 FN-225 Single Base Substitution G-C INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN620-S.SNP.7:19414380 chr07:019414380 0 W/19414380-19414380 FN620-S Single Base Substitution G-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN945-S.SNP.7:19419525 chr07:019419525 0 W/19419525-19419525 FN945-S Single Base Substitution G-A INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2080-S.SNP.7:19420548 chr07:019420548 0 W/19420548-19420548 FN2080-S SNP C -> T AC=2;AN=168;BQB=0.912056;DP=3180;DP4=1761,1344,30,15;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.0811321;MQB=0.609202;MQSB=2.91411e-31;RPB=0.332118;SGB=-53.1653;VDB=0.00172353;EFF=INTRON(MODIFIER||||1340|LOC_Os07g32580|protein_coding|CODING|LOC_Os07g32580.1|11|1) FN3858-S.SNP.7:19420700 chr07:019420700 0 W/19420700-19420700 FN3858-S SNP T -> A AC=1;AN=158;BQB=0.91439;DP=2565;DP4=1151,1234,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.0424951;MQB=0.896462;MQSB=0.000160313;RPB=0.911024;SGB=30.927;VDB=0.839355;EFF=INTRON(MODIFIER||||1340|LOC_Os07g32580|protein_coding|CODING|LOC_Os07g32580.1|11|1) FN3707-S.SNP.7:19428914 chr07:019428914 0 W/19428914-19428914 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.92742;DP=2803;DP4=1267,1430,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.81574e-09;MQSB=0.891566;RPB=0.874785;SGB=58.2031;VDB=0.481347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S109F|357|LOC_Os07g32590|protein_coding|CODING|LOC_Os07g32590.1|3|1) FN3819-S.SNP.7:19430445 chr07:019430445 0 W/19430445-19430445 FN3819-S SNP A -> T AC=1;AN=190;BQB=0.800162;DP=2154;DP4=1096,879,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.14693e-06;MQSB=0.777842;RPB=0.450682;SGB=18.552;VDB=0.364748;EFF=INTRON(MODIFIER||||357|LOC_Os07g32590|protein_coding|CODING|LOC_Os07g32590.1|7|1) FN2609-S.SNP.7:19433648 chr07:019433648 0 W/19433648-19433648 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.376412;DP=4232;DP4=2103,1861,18,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.24973e-22;MQSB=0.999789;RPB=0.651682;SGB=130.027;VDB=0.165143;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.7:19454404 chr07:019454404 0 W/19454404-19454404 FN_770-6-1 Single Base Substitution C-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. W502-3-4.SNP.7:19460103 chr07:019460103 0 W/19460103-19460103 W502-3-4 Single Base Substitution G-A INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1505-S.SNP.7:19465565 chr07:019465565 0 W/19465565-19465565 FN1505-S Single Base Substitution C-T INTERGENIC Homo SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1505-S.SNP.7:19465566 chr07:019465566 0 W/19465566-19465566 FN1505-S Single Base Substitution C-T INTERGENIC Homo SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1023-S.SNP.7:19467196 chr07:019467196 0 W/19467196-19467196 FN1023-S Single Base Substitution T-A INTRON HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN-156.SNP.7:19468438 chr07:019468438 0 W/19468438-19468438 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN931-S.SNP.7:19474228 chr07:019474228 0 W/19474228-19474228 FN931-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN931-S.SNP.7:19474229 chr07:019474229 0 W/19474229-19474229 FN931-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN-263.SNP.7:19475527 chr07:019475527 0 W/19475527-19475527 FN-263 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN3039-S.SNP.7:19475613 chr07:019475613 0 W/19475613-19475613 FN3039-S SNP A -> G AC=1;AN=184;BQB=0.999843;DP=2969;DP4=1662,1178,12,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33746e-08;MQSB=0.999976;RPB=0.86238;SGB=35.7479;VDB=0.290318;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L425|517|LOC_Os07g32650|protein_coding|CODING|LOC_Os07g32650.1|1|1) FN2288.SNP.7:19485077 chr07:019485077 0 W/19485077-19485077 FN2288 SNP G -> A AC=1;AN=192;BQB=0.647399;DP=4534;DP4=2039,2148,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.1077e-05;MQSB=0.0600994;RPB=0.95972;SGB=32.6514;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.7:19485741 chr07:019485741 0 W/19485741-19485741 FN2195-S SNP T -> A AC=1;AN=190;BQB=0.0708324;DP=5027;DP4=2185,2127,18,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.63129e-10;MQSB=0.00347221;RPB=0.34654;SGB=-8.79096;VDB=0.3723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.7:19492511 chr07:019492511 0 W/19492511-19492511 FN3730-S SNP A -> T AC=1;AN=190;BQB=0.836812;DP=2898;DP4=1384,1209,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.09841e-13;MQSB=0.936661;RPB=0.903383;SGB=24.3115;VDB=0.871729;EFF=INTRON(MODIFIER||||546|LOC_Os07g32660|protein_coding|CODING|LOC_Os07g32660.1|2|1) FN2463.SNP.7:19495222 chr07:019495222 0 W/19495222-19495222 FN2463 SNP T -> A AC=1;AN=200;BQB=0.540829;DP=4679;DP4=2485,1928,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.30908e-13;MQSB=0.693378;RPB=0.863056;SGB=123.342;VDB=0.968201;EFF=INTRON(MODIFIER||||546|LOC_Os07g32660|protein_coding|CODING|LOC_Os07g32660.1|2|1) FN898-S.SNP.7:19497935 chr07:019497935 0 W/19497935-19497935 FN898-S Single Base Substitution A-C INTRON HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN714-S.SNP.7:19501180 chr07:019501180 0 W/19501180-19501180 FN714-S Single Base Substitution C-T INTRON HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3728-S.SNP.7:19509015 chr07:019509015 0 W/19509015-19509015 FN3728-S SNP T -> C AC=1;AN=190;BQB=0.212822;DP=3280;DP4=1554,1615,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000567487;MQSB=0.459141;RPB=0.87417;SGB=44.5415;VDB=0.464423;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.7:19515986 chr07:019515986 0 W/19515986-19515986 FN1029-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g32680 retrotransposon protein, putative, unclassified, expressed SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN_949-1.SNP.7:19516517 chr07:019516517 0 W/19516517-19516517 FN_949-1 Single Base Substitution A-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN_829-2-5.SNP.7:19530605 chr07:019530605 0 W/19530605-19530605 FN_829-2-5 Single Base Substitution G-A HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN-249.SNP.7:19537966 chr07:019537966 0 W/19537966-19537966 FN-249 Single Base Substitution G-A INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1757-S.SNP.7:19549040 chr07:019549040 0 W/19549040-19549040 FN1757-S SNP C -> T AC=1;AN=188;BQB=0.949573;DP=2986;DP4=1718,1233,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.4368e-11;MQSB=0.835307;RPB=0.555772;SGB=13.2547;VDB=0.000781616;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.7:19565607 chr07:019565607 0 W/19565607-19565607 W416-6-1 Single Base Substitution T-C INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2578-S.SNP.7:19573643 chr07:019573643 0 W/19573643-19573643 FN2578-S SNP C -> T AC=1;AN=198;BQB=0.615022;DP=4119;DP4=2112,1841,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=15;MQ0F=0.263171;MQB=0.12644;MQSB=1.99621e-07;RPB=0.968451;SGB=40.3588;VDB=0.895256;EFF=SPLICE_SITE_REGION(LOW||||1445|LOC_Os07g32750|protein_coding|CODING|LOC_Os07g32750.1|4|1),INTRON(MODIFIER||||1445|LOC_Os07g32750|protein_coding|CODING|LOC_Os07g32750.1|4|1) FN-371.SNP.7:19574399 chr07:019574399 0 W/19574399-19574399 FN-371 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g32750 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN2677-S.SNP.7:19577697 chr07:019577697 0 W/19577697-19577697 FN2677-S SNP C -> T AC=1;AN=200;BQB=0.550013;DP=4629;DP4=2304,2063,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.98109e-13;MQSB=0.999265;RPB=0.311959;SGB=42.5108;VDB=0.971164;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.7:19582254 chr07:019582254 0 W/19582254-19582254 FN-394 Single Base Substitution C-T INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3422-S.SNP.7:19589175 chr07:019589175 0 W/19589175-19589175 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.984098;DP=2945;DP4=1654,1216,13,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25214e-07;MQSB=0.917581;RPB=0.891375;SGB=57.786;VDB=0.778595;EFF=INTERGENIC(MODIFIER||||||||||1) FN_826-4-1.SNP.7:19591261 chr07:019591261 0 W/19591261-19591261 FN_826-4-1 Single Base Substitution T-C HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN4110-S.SNP.7:19601173 chr07:019601173 0 W/19601173-19601173 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.999516;DP=2894;DP4=1622,1166,11,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.0791e-11;MQSB=0.975629;RPB=0.639096;SGB=56.6929;VDB=0.242626;EFF=INTRON(MODIFIER||||247|LOC_Os07g32774|protein_coding|CODING|LOC_Os07g32774.2|1|1),INTRON(MODIFIER||||301|LOC_Os07g32774|protein_coding|CODING|LOC_Os07g32774.1|1|1) FN3575-S.SNP.7:19603461 chr07:019603461 0 W/19603461-19603461 FN3575-S SNP G -> A AC=1;AN=188;BQB=0.85911;DP=2733;DP4=1164,1437,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18473e-12;MQSB=0.974573;RPB=0.820381;SGB=85.3253;VDB=0.98506;EFF=INTRON(MODIFIER||||301|LOC_Os07g32774|protein_coding|CODING|LOC_Os07g32774.1|1|1) FN1080-S.SNP.7:19603789 chr07:019603789 0 W/19603789-19603789 FN1080-S Single Base Substitution C-G INTRON HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3438-S.SNP.7:19605444 chr07:019605444 0 W/19605444-19605444 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.955524;DP=2262;DP4=1321,870,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.65452e-06;MQSB=0.191308;RPB=0.998388;SGB=28.7043;VDB=0.957166;EFF=INTRON(MODIFIER||||301|LOC_Os07g32774|protein_coding|CODING|LOC_Os07g32774.1|1|1) FN3376-S.SNP.7:19611413 chr07:019611413 0 W/19611413-19611413 FN3376-S SNP T -> A AC=1;AN=184;BQB=0.847214;DP=3251;DP4=1710,1418,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10018e-06;MQSB=0.999295;RPB=0.0474197;SGB=32.2261;VDB=0.107805;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.7:19611862 chr07:019611862 0 W/19611862-19611862 FN968-S Single Base Substitution G-A INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN972-S.SNP.7:19617788 chr07:019617788 0 W/19617788-19617788 FN972-S Single Base Substitution A-C INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2083-S.SNP.7:19619722 chr07:019619722 0 W/19619722-19619722 FN2083-S SNP C -> G AC=1;AN=168;BQB=0.636473;DP=3935;DP4=2062,1810,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.70937e-13;MQSB=0.886034;RPB=0.84341;SGB=-77.4832;VDB=0.771464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.7:19622384 chr07:019622384 0 W/19622384-19622384 FN1570-S Single Base Substitution G-A INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2779-S.SNP.7:19633562 chr07:019633562 0 W/19633562-19633562 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.815287;DP=4391;DP4=2184,1980,15,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.37589e-18;MQSB=0.289681;RPB=0.950577;SGB=70.8662;VDB=0.20642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.7:19650634 chr07:019650634 0 W/19650634-19650634 FN1302-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3422-S.SNP.7:19651198 chr07:019651198 0 W/19651198-19651198 FN3422-S SNP G -> T AC=2;AN=184;BQB=0.998587;DP=3099;DP4=1310,1699,5,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.15638e-12;MQSB=0.952914;RPB=0.93267;SGB=93.9603;VDB=0.0926143;EFF=INTERGENIC(MODIFIER||||||||||1) FN-6.SNP.7:19653400 chr07:019653400 0 W/19653400-19653400 FN-6 Single Base Substitution A-G INTERGENIC Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN2181-S.SNP.7:19654882 chr07:019654882 0 W/19654882-19654882 FN2181-S SNP C -> A AC=1;AN=190;BQB=0.667634;DP=4347;DP4=2283,1830,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.41102e-09;MQSB=0.725462;RPB=0.72815;SGB=57.4238;VDB=0.26316;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E159D|171|LOC_Os07g32870|protein_coding|CODING|LOC_Os07g32870.1|1|1) FN318-S.SNP.7:19660493 chr07:019660493 0 W/19660493-19660493 FN318-S Single Base Substitution G-A INTRON HOMO SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN1344-S.SNP.7:19681313 chr07:019681313 0 W/19681313-19681313 FN1344-S Single Base Substitution G-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-361.SNP.7:19684105 chr07:019684105 0 W/19684105-19684105 FN-361 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g32920 expressed protein SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN1120-S.SNP.7:19687328 chr07:019687328 0 W/19687328-19687328 FN1120-S Single Base Substitution C-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN3763-S.SNP.7:19690467 chr07:019690467 0 W/19690467-19690467 FN3763-S SNP T -> G AC=1;AN=190;BQB=0.955209;DP=3195;DP4=1668,1290,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.27115e-08;MQSB=0.830071;RPB=0.561267;SGB=26.2136;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.7:19699419 chr07:019699419 0 W/19699419-19699419 FN428-S Single Base Substitution G-A INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3478-S.SNP.7:19699523 chr07:019699523 0 W/19699523-19699523 FN3478-S SNP C -> T AC=1;AN=184;BQB=0.370249;DP=3174;DP4=1515,1492,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.20061e-09;MQSB=0.67169;RPB=0.368052;SGB=56.8786;VDB=0.750287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.7:19699979 chr07:019699979 0 W/19699979-19699979 FN-124 Single Base Substitution C-A INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN3808-S.SNP.7:19702595 chr07:019702595 0 W/19702595-19702595 FN3808-S SNP G -> A AC=1;AN=190;BQB=0.9742;DP=2687;DP4=1253,1297,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000372162;MQB=6.99391e-05;MQSB=0.897843;RPB=0.420818;SGB=26.3271;VDB=0.587934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.7:19708422 chr07:019708422 0 W/19708422-19708422 FN1327-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN801-S.SNP.7:19708422 chr07:019708422 0 W/19708422-19708422 FN801-S Single Base Substitution G-A INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN2080-S.SNP.7:19708927 chr07:019708927 0 W/19708927-19708927 FN2080-S SNP A -> T AC=2;AN=168;BQB=0.490755;DP=2559;DP4=1364,1157,23,9;HOB=0.0235261;ICB=0.494119;MQ=29;MQ0F=0.159047;MQB=0.993061;MQSB=0;RPB=0.542307;SGB=-45.7659;VDB=0.0414872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.7:19711841 chr07:019711841 0 W/19711841-19711841 FN3902-S SNP T -> G AC=1;AN=158;BQB=0.811731;DP=2182;DP4=1019,1074,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0421632;MQB=0.644247;MQSB=0;RPB=0.986487;SGB=42.6978;VDB=0.265497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1680-S.SNP.7:19719253 chr07:019719253 0 W/19719253-19719253 FN1680-S SNP C -> T AC=2;AN=188;BQB=0.272074;DP=1174;DP4=456,660,4,12;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.0238501;MQB=0.443822;MQSB=0.202273;RPB=0.734283;SGB=26.0762;VDB=0.857478;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1430|2027|LOC_Os07g33010|protein_coding|CODING|LOC_Os07g33010.1|2|1) FN2790-S.SNP.7:19719253 chr07:019719253 0 W/19719253-19719253 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.0900734;DP=3559;DP4=1737,1601,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0236021;MQB=0.532856;MQSB=0;RPB=0.053789;SGB=61.7198;VDB=0.425957;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1430|2027|LOC_Os07g33010|protein_coding|CODING|LOC_Os07g33010.1|2|1) FN3506-S.SNP.7:19726404 chr07:019726404 0 W/19726404-19726404 FN3506-S SNP G -> A AC=1;AN=188;BQB=0.991476;DP=2735;DP4=1556,1116,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74263e-07;MQSB=0.999588;RPB=0.119221;SGB=44.4357;VDB=0.165711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.7:19727518 chr07:019727518 0 W/19727518-19727518 FN1122-S Single Base Substitution T-C INTRON HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2194-S.SNP.7:19728541 chr07:019728541 0 W/19728541-19728541 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.831524;DP=4516;DP4=2136,2081,19,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59757e-18;MQSB=0.765051;RPB=0.83759;SGB=-1.59056;VDB=0.0595618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.7:19734237 chr07:019734237 0 W/19734237-19734237 FN3691-S SNP G -> A AC=1;AN=190;BQB=0.0253678;DP=2861;DP4=1155,1469,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.44414e-09;MQSB=0.174687;RPB=0.969493;SGB=-54.5347;VDB=0.599011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.7:19738042 chr07:019738042 0 W/19738042-19738042 FN2554-S SNP G -> A AC=2;AN=198;BQB=0.720333;DP=4206;DP4=2016,2003,15,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.24915e-16;MQSB=0.965629;RPB=0.843165;SGB=60.4858;VDB=0.97779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.7:19742495 chr07:019742495 0 W/19742495-19742495 FN3701-S SNP A -> T AC=1;AN=190;BQB=0.998863;DP=3029;DP4=1461,1399,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89113e-09;MQSB=0.872553;RPB=0.777071;SGB=26.2136;VDB=0.626989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V121E|717|LOC_Os07g33050|protein_coding|CODING|LOC_Os07g33050.1|1|1) FN501-S.SNP.7:19743004 chr07:019743004 0 W/19743004-19743004 FN501-S Single Base Substitution G-A INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN501-S.SNP.7:19743007 chr07:019743007 0 W/19743007-19743007 FN501-S Single Base Substitution G-A INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN784-S.SNP.7:19761902 chr07:019761902 0 W/19761902-19761902 FN784-S Single Base Substitution A-G INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2452.SNP.7:19762409 chr07:019762409 0 W/19762409-19762409 FN2452 SNP G -> A AC=2;AN=200;BQB=0.364539;DP=3889;DP4=1883,1760,23,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.3614e-19;MQSB=0.958399;RPB=0.84253;SGB=119.583;VDB=0.909456;EFF=UTR_5_PRIME(MODIFIER||11||1043|LOC_Os07g33100|protein_coding|CODING|LOC_Os07g33100.1|1|1) FN2729-S.SNP.7:19766393 chr07:019766393 0 W/19766393-19766393 FN2729-S SNP C -> T AC=2;AN=200;BQB=0.821978;DP=5200;DP4=2853,1956,39,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.25943e-31;MQSB=0.946804;RPB=0.534399;SGB=138.902;VDB=0.0706641;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T785|1043|LOC_Os07g33100|protein_coding|CODING|LOC_Os07g33100.1|6|1) FN2572-S.SNP.7:19779761 chr07:019779761 0 W/19779761-19779761 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.328506;DP=3697;DP4=1674,1791,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.72189e-06;MQSB=0.989756;RPB=0.320974;SGB=58.7391;VDB=0.105278;EFF=UTR_5_PRIME(MODIFIER||988||436|LOC_Os07g33120|protein_coding|CODING|LOC_Os07g33120.1|1|1) FN_822-5-1.SNP.7:19780290 chr07:019780290 0 W/19780290-19780290 FN_822-5-1 Single Base Substitution C-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3447-S.SNP.7:19781353 chr07:019781353 0 W/19781353-19781353 FN3447-S SNP A -> G AC=1;AN=184;BQB=0.834729;DP=4473;DP4=2159,2162,16,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81679e-16;MQSB=0.983761;RPB=0.0980856;SGB=81.5311;VDB=0.136549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D202G|436|LOC_Os07g33120|protein_coding|CODING|LOC_Os07g33120.1|1|1) FN3311-S.SNP.7:19788454 chr07:019788454 0 W/19788454-19788454 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.956768;DP=2716;DP4=1372,1241,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.38365e-11;MQSB=0.982641;RPB=0.968447;SGB=38.4058;VDB=0.457311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.7:19792194 chr07:019792194 0 W/19792194-19792194 FN1754-S SNP G -> A AC=2;AN=188;BQB=0.184264;DP=2823;DP4=1412,1351,12,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.64766e-09;MQSB=0.756282;RPB=0.309782;SGB=-77.9263;VDB=0.589731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:19792194 chr07:019792194 0 W/19792194-19792194 FN2619-S SNP G -> A AC=2;AN=198;BQB=0.159165;DP=4169;DP4=1953,1896,42,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.57016e-42;MQSB=0.845191;RPB=0.461615;SGB=263.665;VDB=0.654176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.7:19796882 chr07:019796882 0 W/19796882-19796882 FN2314 SNP T -> A AC=1;AN=192;BQB=0.127786;DP=6101;DP4=3432,2162,10,19;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0772005;MQB=0.0823363;MQSB=0;RPB=0.987715;SGB=-7.43215;VDB=0.782542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L184H|845|LOC_Os07g33150|protein_coding|CODING|LOC_Os07g33150.1|2|1) W247-2-1.SNP.7:19798629 chr07:019798629 0 W/19798629-19798629 W247-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g33150 retrotransposon protein, putative, unclassified, expressed SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1695-S.SNP.7:19800118 chr07:019800118 0 W/19800118-19800118 FN1695-S SNP C -> A AC=2;AN=188;BQB=0.830243;DP=2564;DP4=1341,1173,15,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.40018e-15;MQSB=0.378404;RPB=0.470562;SGB=85.5904;VDB=0.822462;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S241Y|361|LOC_Os07g33160|protein_coding|CODING|LOC_Os07g33160.1|1|1) FN1456-S.SNP.7:19805480 chr07:019805480 0 W/19805480-19805480 FN1456-S Single Base Substitution C-G INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2286.SNP.7:19808850 chr07:019808850 0 W/19808850-19808850 FN2286 SNP C -> T AC=1;AN=192;BQB=0.86801;DP=4810;DP4=2166,2115,15,6;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0197505;MQB=0.977548;MQSB=0.656305;RPB=0.612381;SGB=90.2896;VDB=0.976665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.7:19812798 chr07:019812798 0 W/19812798-19812798 FN2474 SNP C -> T AC=1;AN=198;BQB=0.936049;DP=3939;DP4=1590,2164,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0144707;MQB=0.00132278;MQSB=0.816291;RPB=0.464594;SGB=47.4799;VDB=0.571004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.7:19815076 chr07:019815076 0 W/19815076-19815076 FN1423-S Single Base Substitution G-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1295-S.SNP.7:19821138 chr07:019821138 0 W/19821138-19821138 FN1295-S Single Base Substitution G-T INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1335-S.SNP.7:19821210 chr07:019821210 0 W/19821210-19821210 FN1335-S Single Base Substitution G-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN466-S.SNP.7:19822124 chr07:019822124 0 W/19822124-19822124 FN466-S Single Base Substitution G-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1156-S.SNP.7:19830577 chr07:019830577 0 W/19830577-19830577 FN1156-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g33200 expressed protein SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2662-S.SNP.7:19833098 chr07:019833098 0 W/19833098-19833098 FN2662-S SNP C -> G AC=1;AN=200;BQB=0.866469;DP=4898;DP4=2042,2605,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.13291e-07;MQSB=0.998586;RPB=0.978334;SGB=16.4591;VDB=0.274834;EFF=UTR_3_PRIME(MODIFIER||1037||482|LOC_Os07g33200|protein_coding|CODING|LOC_Os07g33200.1|10|1) FN2706-S.SNP.7:19834313 chr07:019834313 0 W/19834313-19834313 FN2706-S SNP G -> C AC=1;AN=200;BQB=0.443951;DP=4845;DP4=2221,2289,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60328e-10;MQSB=0.959492;RPB=0.94363;SGB=15.9106;VDB=0.615502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.7:19835624 chr07:019835624 0 W/19835624-19835624 FN3661-S SNP A -> T AC=1;AN=190;BQB=0.892202;DP=2004;DP4=755,1081,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=8.44102e-05;MQSB=0.700063;RPB=0.321005;SGB=-5.21201;VDB=0.136639;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.7:19840866 chr07:019840866 0 W/19840866-19840866 FN3659-S SNP T -> G AC=1;AN=190;BQB=0.965038;DP=2776;DP4=1284,1380,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25096e-07;MQSB=0.961222;RPB=0.251069;SGB=28.9929;VDB=0.00898234;EFF=INTRON(MODIFIER||||512|LOC_Os07g33210|protein_coding|CODING|LOC_Os07g33210.1|5|1) FN828-S.SNP.7:19846990 chr07:019846990 0 W/19846990-19846990 FN828-S Single Base Substitution C-T INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN803-S.SNP.7:19856378 chr07:019856378 0 W/19856378-19856378 FN803-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g33224 BNR/Asp-box repeat family protein, putative, expressed SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN555-S.SNP.7:19858018 chr07:019858018 0 W/19858018-19858018 FN555-S Single Base Substitution G-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN4116-S.SNP.7:19872431 chr07:019872431 0 W/19872431-19872431 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.891234;DP=2987;DP4=1375,1521,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0344828;MQB=0.0389191;MQSB=4.73068e-16;RPB=0.988137;SGB=57.644;VDB=0.12752;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.7:19874312 chr07:019874312 0 W/19874312-19874312 FN573-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g33260 transposon protein, putative, unclassified, expressed SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN4204-S.SNP.7:19881478 chr07:019881478 0 W/19881478-19881478 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.630487;DP=1985;DP4=886,1048,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.15265e-05;MQSB=0.991256;RPB=0.793299;SGB=27.9928;VDB=0.655343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.7:19881944 chr07:019881944 0 W/19881944-19881944 FN2338 SNP G -> C AC=2;AN=192;BQB=0.473115;DP=5312;DP4=2406,2506,25,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.26297e-25;MQSB=0.437403;RPB=0.808815;SGB=60.5426;VDB=0.465687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.7:19888397 chr07:019888397 0 W/19888397-19888397 FN2600-S SNP T -> C AC=1;AN=198;BQB=0.483523;DP=4045;DP4=1985,1848,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31183e-09;MQSB=0.97381;RPB=0.955617;SGB=63.3342;VDB=0.113417;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.7:19895670 chr07:019895670 0 W/19895670-19895670 FN4305-S SNP T -> C AC=2;AN=170;BQB=0.767162;DP=2215;DP4=1020,1099,15,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.70206e-12;MQSB=0.971391;RPB=0.635125;SGB=69.3045;VDB=0.989448;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.7:19907160 chr07:019907160 0 W/19907160-19907160 FN537-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN-226.SNP.7:19908262 chr07:019908262 0 W/19908262-19908262 FN-226 Single Base Substitution A-G INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2780-S.SNP.7:19934021 chr07:019934021 0 W/19934021-19934021 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.932838;DP=4180;DP4=1868,2054,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.10803e-09;MQSB=0.986073;RPB=0.488462;SGB=9.3494;VDB=0.436022;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.7:19940594 chr07:019940594 0 W/19940594-19940594 FN465-S Single Base Substitution C-G INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2279-S.SNP.7:19941630 chr07:019941630 0 W/19941630-19941630 FN2279-S SNP A -> G AC=1;AN=190;BQB=0.469215;DP=5304;DP4=2401,2449,19,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000188537;MQB=2.76587e-21;MQSB=0.802669;RPB=0.740294;SGB=124.947;VDB=0.444545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D436G|677|LOC_Os07g33360|protein_coding|CODING|LOC_Os07g33360.1|7|1) FN4158-S.SNP.7:19951968 chr07:019951968 0 W/19951968-19951968 FN4158-S SNP C -> A AC=1;AN=170;BQB=0.989852;DP=2030;DP4=983,961,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.49573e-10;MQSB=0.646075;RPB=0.732906;SGB=70.0854;VDB=0.937711;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.7:19964605 chr07:019964605 0 W/19964605-19964605 FN573-S Single Base Substitution G-A INTERGENIC HOMO SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN837-S.SNP.7:19967134 chr07:019967134 0 W/19967134-19967134 FN837-S Single Base Substitution C-T INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN1409-S.SNP.7:19968182 chr07:019968182 0 W/19968182-19968182 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1409-S.SNP.7:19968188 chr07:019968188 0 W/19968188-19968188 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2387.SNP.7:19970779 chr07:019970779 0 W/19970779-19970779 FN2387 SNP C -> A AC=1;AN=192;BQB=0.160098;DP=4760;DP4=2161,2297,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.59014e-09;MQSB=0.75542;RPB=0.648695;SGB=99.4183;VDB=0.849241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F85L|811|LOC_Os07g33410|protein_coding|CODING|LOC_Os07g33410.1|1|1) FN4147-S.SNP.7:19974256 chr07:019974256 0 W/19974256-19974256 FN4147-S SNP G -> A AC=1;AN=170;BQB=0.952388;DP=2329;DP4=1196,1058,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.4586e-05;MQSB=0.634215;RPB=0.816277;SGB=30.1021;VDB=0.681298;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.7:19975805 chr07:019975805 0 W/19975805-19975805 FN-262 Single Base Substitution C-G UTR_3_PRIME HOMO SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2545-S.SNP.7:19975824 chr07:019975824 0 W/19975824-19975824 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.10117;DP=4209;DP4=2032,1918,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71186e-09;MQSB=0.940399;RPB=0.660709;SGB=61.7198;VDB=0.923811;EFF=UTR_3_PRIME(MODIFIER||376||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.2|7|1),UTR_3_PRIME(MODIFIER||376||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.3|6|1),UTR_3_PRIME(MODIFIER||376||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.4|6|1),UTR_3_PRIME(MODIFIER||376||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.1|6|1) FN3380-S.SNP.7:19980782 chr07:019980782 0 W/19980782-19980782 FN3380-S SNP A -> G AC=1;AN=184;BQB=0.999821;DP=2909;DP4=1227,1426,1,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33556e-05;MQSB=0.529912;RPB=0.61928;SGB=21.6609;VDB=0.635556;EFF=SPLICE_SITE_REGION(LOW||||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.2|2|1),SPLICE_SITE_REGION(LOW||||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.3|2|1),SPLICE_SITE_REGION(LOW||||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.4|2|1),UTR_5_PRIME(MODIFIER||1571||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.3|2|1),UTR_5_PRIME(MODIFIER||1571||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.4|2|1),UTR_5_PRIME(MODIFIER||1571||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.2|2|1),INTRON(MODIFIER||||325|LOC_Os07g33420|protein_coding|CODING|LOC_Os07g33420.1|1|1) FN2322.SNP.7:19991110 chr07:019991110 0 W/19991110-19991110 FN2322 SNP G -> C AC=1;AN=192;BQB=0.9786;DP=4976;DP4=2370,2396,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200965;MQB=1.33036e-13;MQSB=0.811267;RPB=0.915243;SGB=68.2948;VDB=0.413078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K466N|1473|LOC_Os07g33450|protein_coding|CODING|LOC_Os07g33450.1|4|1) FN618-S.SNP.7:20003580 chr07:020003580 0 W/20003580-20003580 FN618-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN762-S.SNP.7:20005912 chr07:020005912 0 W/20005912-20005912 FN762-S Single Base Substitution C-A INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2577-S.SNP.7:20010339 chr07:020010339 0 W/20010339-20010339 FN2577-S SNP A -> T AC=1;AN=198;BQB=0.813851;DP=4462;DP4=2477,1790,21,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02157e-16;MQSB=0.543169;RPB=0.901809;SGB=-40.6893;VDB=0.572934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:20011591 chr07:020011591 0 W/20011591-20011591 FN2577-S SNP T -> G AC=2;AN=198;BQB=0.98067;DP=4337;DP4=2216,1936,13,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.48253e-16;MQSB=0.705261;RPB=0.959612;SGB=57.8907;VDB=0.968692;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.7:20023794 chr07:020023794 0 W/20023794-20023794 FN3375-S SNP T -> A AC=2;AN=184;BQB=0.997622;DP=3454;DP4=1358,1993,17,18;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.0607991;MQB=6.56664e-05;MQSB=4.66731e-19;RPB=0.92901;SGB=113.227;VDB=0.60731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y1189F|1447|LOC_Os07g33500|protein_coding|CODING|LOC_Os07g33500.1|2|1) FN4052-S.SNP.7:20028887 chr07:020028887 0 W/20028887-20028887 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.999989;DP=3050;DP4=1127,1767,17,20;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.100656;MQB=0.951728;MQSB=2.27639e-12;RPB=0.784146;SGB=158.512;VDB=0.463664;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R40Q|408|LOC_Os07g33510|protein_coding|CODING|LOC_Os07g33510.1|1|1) FN577-S.SNP.7:20031428 chr07:020031428 0 W/20031428-20031428 FN577-S Single Base Substitution T-C INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN-173.SNP.7:20032173 chr07:020032173 0 W/20032173-20032173 FN-173 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN3115-S.SNP.7:20039921 chr07:020039921 0 W/20039921-20039921 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.365453;DP=1892;DP4=1076,597,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00158562;MQB=4.25228e-06;MQSB=0.055274;RPB=0.941432;SGB=-17.3229;VDB=0.0993177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.7:20044810 chr07:020044810 0 W/20044810-20044810 FN-154 Single Base Substitution C-A INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN486-S.SNP.7:20056705 chr07:020056705 0 W/20056705-20056705 FN486-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g33570 retrotransposon protein, putative, unclassified, expressed SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN-410.SNP.7:20056713 chr07:020056713 0 W/20056713-20056713 FN-410 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN3439-S.SNP.7:20057184 chr07:020057184 0 W/20057184-20057184 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.785898;DP=3073;DP4=1362,1613,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25517e-06;MQSB=0.995634;RPB=0.91114;SGB=35.7479;VDB=0.616822;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q666|854|LOC_Os07g33570|protein_coding|CODING|LOC_Os07g33570.1|3|1) FN3424-S.SNP.7:20057483 chr07:020057483 0 W/20057483-20057483 FN3424-S SNP C -> G AC=1;AN=184;BQB=0.932724;DP=3241;DP4=1770,1385,3,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.79896e-09;MQSB=0.965747;RPB=0.944468;SGB=49.835;VDB=0.4988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G567R|854|LOC_Os07g33570|protein_coding|CODING|LOC_Os07g33570.1|3|1) FN856-S.SNP.7:20058798 chr07:020058798 0 W/20058798-20058798 FN856-S Single Base Substitution A-T INTRON HOMO SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN3725-S.SNP.7:20060633 chr07:020060633 0 W/20060633-20060633 FN3725-S SNP T -> G AC=1;AN=190;BQB=0.994828;DP=2445;DP4=1293,870,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.9767e-07;MQSB=0.981975;RPB=0.93652;SGB=18.552;VDB=0.90784;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.7:20062360 chr07:020062360 0 W/20062360-20062360 FN3796-S SNP T -> C AC=1;AN=190;BQB=0.993993;DP=2973;DP4=1661,1191,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52958e-10;MQSB=0.826831;RPB=0.944905;SGB=23.6597;VDB=0.579506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.7:20062361 chr07:020062361 0 W/20062361-20062361 FN3796-S SNP C -> T AC=1;AN=190;BQB=0.681283;DP=2969;DP4=1641,1121,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.78958e-09;MQSB=0.926724;RPB=0.868899;SGB=-14.3297;VDB=0.840409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.7:20062362 chr07:020062362 0 W/20062362-20062362 FN3796-S SNP C -> A AC=1;AN=190;BQB=0.124991;DP=2984;DP4=1661,1137,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.94134e-08;MQSB=0.879398;RPB=0.773248;SGB=-14.3297;VDB=0.397502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.7:20064364 chr07:020064364 0 W/20064364-20064364 FN3368-S SNP A -> T AC=1;AN=184;BQB=0.824224;DP=2718;DP4=1304,1319,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00183959;MQB=0.630851;MQSB=0.894881;RPB=0.652571;SGB=15.7097;VDB=0.248536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T282S|475|LOC_Os07g33580|protein_coding|CODING|LOC_Os07g33580.1|2|1) FN1635-S.SNP.7:20073231 chr07:020073231 0 W/20073231-20073231 FN1635-S SNP G -> A AC=1;AN=188;BQB=0.00212129;DP=2544;DP4=653,1818,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.73479e-05;MQSB=0.912739;RPB=0.978441;SGB=-165.511;VDB=0.593899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.7:20079796 chr07:020079796 0 W/20079796-20079796 FN2350 SNP A -> C AC=2;AN=192;BQB=0.800974;DP=4743;DP4=2430,1916,37,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.5191e-28;MQSB=0.725379;RPB=0.75078;SGB=126.359;VDB=0.655565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M74L|436|LOC_Os07g33610|protein_coding|CODING|LOC_Os07g33610.1|3|1),NON_SYNONYMOUS_START(LOW|MISSENSE|Atg/Ctg|M1L|363|LOC_Os07g33610|protein_coding|CODING|LOC_Os07g33610.2|3|1) FN738-S.SNP.7:20101391 chr07:020101391 0 W/20101391-20101391 FN738-S Single Base Substitution C-A INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN4221-S.SNP.7:20102403 chr07:020102403 0 W/20102403-20102403 FN4221-S SNP C -> T AC=1;AN=170;BQB=0.264693;DP=2498;DP4=1399,1011,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000578864;MQSB=0.845949;RPB=0.164736;SGB=7.67082;VDB=0.838183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.7:20104252 chr07:020104252 0 W/20104252-20104252 FN1104-S Single Base Substitution A-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN4066-S.SNP.7:20104745 chr07:020104745 0 W/20104745-20104745 FN4066-S SNP C -> T AC=1;AN=168;BQB=0.550796;DP=2760;DP4=1270,1377,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000103053;MQSB=0.969931;RPB=0.215142;SGB=14.8923;VDB=0.349734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.7:20108563 chr07:020108563 0 W/20108563-20108563 FN3829-S SNP A -> G AC=1;AN=190;BQB=0.39559;DP=2549;DP4=1097,1374,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.14101e-06;MQSB=0.152545;RPB=0.977938;SGB=71.8647;VDB=0.0383153;EFF=UTR_5_PRIME(MODIFIER||406||183|LOC_Os07g33650|protein_coding|CODING|LOC_Os07g33650.1|1|1),INTRON(MODIFIER||||183|LOC_Os07g33650|protein_coding|CODING|LOC_Os07g33650.3|1|1),INTRON(MODIFIER||||183|LOC_Os07g33650|protein_coding|CODING|LOC_Os07g33650.2|1|1) FN946-S.SNP.7:20110385 chr07:020110385 0 W/20110385-20110385 FN946-S Single Base Substitution A-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN920-S.SNP.7:20110813 chr07:020110813 0 W/20110813-20110813 FN920-S Single Base Substitution A-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3777-S.SNP.7:20117245 chr07:020117245 0 W/20117245-20117245 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.484999;DP=2418;DP4=1096,1258,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53283e-07;MQSB=0.956119;RPB=0.935357;SGB=39.6545;VDB=0.33436;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L1024F|1226|LOC_Os07g33670|protein_coding|CODING|LOC_Os07g33670.1|15|1) FN2444.SNP.7:20124998 chr07:020124998 0 W/20124998-20124998 FN2444 SNP A -> C AC=1;AN=200;BQB=0.711946;DP=5104;DP4=2325,2547,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54355e-07;MQSB=0.998268;RPB=0.180585;SGB=63.4749;VDB=0.688647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.7:20126667 chr07:020126667 0 W/20126667-20126667 FN3774-S SNP G -> T AC=1;AN=190;BQB=0.86383;DP=1680;DP4=736,781,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.4247e-05;MQSB=0.575885;RPB=0.0550872;SGB=25.439;VDB=0.00928241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.7:20126676 chr07:020126676 0 W/20126676-20126676 FN3774-S SNP T -> A AC=1;AN=190;BQB=0.17718;DP=1654;DP4=801,768,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29144e-06;MQSB=0.553972;RPB=0.168285;SGB=25.439;VDB=0.251186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.7:20128959 chr07:020128959 0 W/20128959-20128959 FN3657-S SNP T -> A AC=1;AN=190;BQB=0.99436;DP=2804;DP4=1307,1368,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12411e-06;MQSB=0.982472;RPB=0.246705;SGB=28.9929;VDB=0.737713;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.7:20128985 chr07:020128985 0 W/20128985-20128985 FN-89 Single Base Substitution A-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN1720-S.SNP.7:20129219 chr07:020129219 0 W/20129219-20129219 FN1720-S SNP T -> C AC=2;AN=188;BQB=0.203948;DP=3842;DP4=1949,1820,23,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.19847e-17;MQSB=0.999965;RPB=0.271332;SGB=-403.005;VDB=0.119199;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.7:20140549 chr07:020140549 0 W/20140549-20140549 FN1022-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1288-S.SNP.7:20143810 chr07:020143810 0 W/20143810-20143810 FN1288-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1339-S.SNP.7:20150894 chr07:020150894 0 W/20150894-20150894 FN1339-S Single Base Substitution T-C INTRON HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN4142-S.SNP.7:20152943 chr07:020152943 0 W/20152943-20152943 FN4142-S SNP C -> T AC=2;AN=170;BQB=0.957611;DP=2485;DP4=1314,1076,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.22457e-13;MQSB=0.985854;RPB=0.997839;SGB=72.7472;VDB=0.217852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.7:20162728 chr07:020162728 0 W/20162728-20162728 FN3820-S SNP A -> C AC=2;AN=190;BQB=0.748432;DP=3547;DP4=1481,1730,18,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90861e-26;MQSB=0.828935;RPB=0.803721;SGB=0.624943;VDB=0.327358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.7:20162732 chr07:020162732 0 W/20162732-20162732 FN3820-S SNP T -> A AC=2;AN=190;BQB=0.918728;DP=3573;DP4=1646,1741,15,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.11057e-25;MQSB=0.867738;RPB=0.996616;SGB=92.6144;VDB=0.201026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.7:20163930 chr07:020163930 0 W/20163930-20163930 FN1047-S Single Base Substitution G-A INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1026-S.SNP.7:20164188 chr07:020164188 0 W/20164188-20164188 FN1026-S Single Base Substitution G-T INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN3600-S.SNP.7:20165950 chr07:020165950 0 W/20165950-20165950 FN3600-S SNP C -> T AC=2;AN=190;BQB=0.940223;DP=2885;DP4=1575,1212,15,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.77426e-16;MQSB=0.999999;RPB=0.879455;SGB=121.957;VDB=0.580414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1398K|1421|LOC_Os07g33730|protein_coding|CODING|LOC_Os07g33730.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1398K|1421|LOC_Os07g33730|protein_coding|CODING|LOC_Os07g33730.2|1|1) FN3115-S.SNP.7:20171670 chr07:020171670 0 W/20171670-20171670 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.788968;DP=2923;DP4=1482,1343,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81095e-08;MQSB=0.995881;RPB=0.88029;SGB=53.2642;VDB=0.872467;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.7:20174790 chr07:020174790 0 W/20174790-20174790 FN3650-S SNP A -> T AC=1;AN=190;BQB=0.591427;DP=3151;DP4=1440,1579,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82859e-06;MQSB=0.946928;RPB=0.87061;SGB=1.00337;VDB=0.911117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T245S|1036|LOC_Os07g33740|protein_coding|CODING|LOC_Os07g33740.1|1|1) FN1028-S.SNP.7:20177678 chr07:020177678 0 W/20177678-20177678 FN1028-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2215-S.SNP.7:20182302 chr07:020182302 0 W/20182302-20182302 FN2215-S SNP C -> T AC=2;AN=190;BQB=0.944537;DP=5288;DP4=2383,2392,21,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.51147e-27;MQSB=0.0925042;RPB=0.154232;SGB=171.148;VDB=0.890327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.7:20182443 chr07:020182443 0 W/20182443-20182443 FN1403-S Single Base Substitution C-T INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2622-S.SNP.7:20183171 chr07:020183171 0 W/20183171-20183171 FN2622-S SNP A -> G AC=1;AN=200;BQB=0.475041;DP=4436;DP4=2180,1998,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.09674e-19;MQSB=0.99195;RPB=0.983823;SGB=132.552;VDB=0.920897;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.7:20186579 chr07:020186579 0 W/20186579-20186579 FN-154 Single Base Substitution G-A STOP_GAINED HET LOC_Os07g33760 retrotransposon protein, putative, unclassified, expressed SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3796-S.SNP.7:20188905 chr07:020188905 0 W/20188905-20188905 FN3796-S SNP T -> G AC=1;AN=190;BQB=0.917862;DP=2777;DP4=1207,1451,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47183e-07;MQSB=0.979514;RPB=0.69924;SGB=44.5415;VDB=0.852039;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.7:20190143 chr07:020190143 0 W/20190143-20190143 FN934-S Single Base Substitution C-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1038-S.SNP.7:20192435 chr07:020192435 0 W/20192435-20192435 FN1038-S Single Base Substitution T-C INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN2482.SNP.7:20205588 chr07:020205588 0 W/20205588-20205588 FN2482 SNP A -> G AC=1;AN=200;BQB=0.461036;DP=3888;DP4=1754,1411,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32238e-08;MQSB=0.0212463;RPB=0.394884;SGB=-61.1002;VDB=0.414403;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.7:20209211 chr07:020209211 0 W/20209211-20209211 FN3803-S SNP A -> G AC=1;AN=190;BQB=0.704024;DP=3061;DP4=1551,1442,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15568e-12;MQSB=0.999787;RPB=0.79583;SGB=60.9777;VDB=0.84699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.7:20211383 chr07:020211383 0 W/20211383-20211383 FN3715-S SNP A -> T AC=2;AN=190;BQB=0.985545;DP=2791;DP4=1468,1198,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.85508e-16;MQSB=0.999997;RPB=0.874091;SGB=85.8548;VDB=0.706759;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.7:20219423 chr07:020219423 0 W/20219423-20219423 FN-90 Single Base Substitution G-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN2142-S.SNP.7:20219591 chr07:020219591 0 W/20219591-20219591 FN2142-S SNP G -> A AC=1;AN=168;BQB=0.857953;DP=3740;DP4=1770,1925,22,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.91141e-14;MQSB=0.999996;RPB=0.410195;SGB=-44.0584;VDB=0.188249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.7:20221691 chr07:020221691 0 W/20221691-20221691 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.154927;DP=2936;DP4=1516,1326,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.14122e-06;MQSB=0.999945;RPB=0.576077;SGB=33.3622;VDB=0.342534;EFF=UTR_5_PRIME(MODIFIER||59||637|LOC_Os07g33790|protein_coding|CODING|LOC_Os07g33790.1|2|1) FN_798-4-2.SNP.7:20224974 chr07:020224974 0 W/20224974-20224974 FN_798-4-2 Single Base Substitution T-C Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN_798-4-2.SNP.7:20224976 chr07:020224976 0 W/20224976-20224976 FN_798-4-2 Single Base Substitution T-C Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN3917-S.SNP.7:20226659 chr07:020226659 0 W/20226659-20226659 FN3917-S SNP T -> C AC=2;AN=158;BQB=0.852987;DP=2620;DP4=1382,1134,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.02734e-14;MQSB=0.922143;RPB=0.475162;SGB=103.87;VDB=0.906476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.7:20235210 chr07:020235210 0 W/20235210-20235210 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.98951;DP=3178;DP4=1579,1504,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22454e-11;MQSB=0.991256;RPB=0.573405;SGB=60.4004;VDB=0.729006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.7:20235226 chr07:020235226 0 W/20235226-20235226 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.897741;DP=2672;DP4=1227,1334,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32058e-08;MQSB=0.997147;RPB=0.210024;SGB=36.1006;VDB=0.443537;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.7:20235429 chr07:020235429 0 W/20235429-20235429 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.998367;DP=2517;DP4=1207,1210,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.58198e-08;MQSB=0.998612;RPB=0.582208;SGB=61.0344;VDB=0.536159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.7:20239542 chr07:020239542 0 W/20239542-20239542 FN2478 SNP T -> A AC=1;AN=200;BQB=0.547725;DP=4741;DP4=2282,2145,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32814e-11;MQSB=0.590136;RPB=0.966428;SGB=54.6902;VDB=0.308786;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.7:20245987 chr07:020245987 0 W/20245987-20245987 FN2345 SNP A -> G AC=2;AN=192;BQB=0.126048;DP=5106;DP4=2156,2324,26,38;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.15002;MQB=0.774226;MQSB=5.95628e-10;RPB=0.462875;SGB=149.438;VDB=0.781597;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G206|377|LOC_Os07g33840|protein_coding|CODING|LOC_Os07g33840.1|2|1) FN1622-S.SNP.7:20249343 chr07:020249343 0 W/20249343-20249343 FN1622-S Single Base Substitution T-C UTR_5_PRIME Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN3707-S.SNP.7:20253610 chr07:020253610 0 W/20253610-20253610 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.820007;DP=2838;DP4=1408,1293,9,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00022628;MQSB=0.594127;RPB=0.995639;SGB=39.9877;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.7:20253924 chr07:020253924 0 W/20253924-20253924 FN4272-S SNP C -> G AC=2;AN=170;BQB=0.794344;DP=2564;DP4=1160,1308,24,23;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.000780031;MQB=0.000890862;MQSB=0.200036;RPB=0.999818;SGB=170.038;VDB=0.840629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.7:20257212 chr07:020257212 0 W/20257212-20257212 FN3572-S SNP T -> C AC=1;AN=188;BQB=0.854574;DP=3167;DP4=1307,1750,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06761e-10;MQSB=0.507475;RPB=0.87709;SGB=43.8792;VDB=0.873593;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.7:20261285 chr07:020261285 0 W/20261285-20261285 FN453-S Single Base Substitution A-G INTRON HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3948-S.SNP.7:20264247 chr07:020264247 0 W/20264247-20264247 FN3948-S SNP A -> G AC=1;AN=168;BQB=0.223695;DP=2417;DP4=1125,1193,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0910219;MQB=0.99308;MQSB=0.00520012;RPB=0.0997139;SGB=75.9177;VDB=0.831162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.7:20264264 chr07:020264264 0 W/20264264-20264264 FN3792-S SNP G -> A AC=1;AN=190;BQB=0.0138239;DP=2368;DP4=1017,1039,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0886824;MQB=0.184388;MQSB=0.000415209;RPB=0.0126793;SGB=-90.1858;VDB=0.820802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.7:20316497 chr07:020316497 0 W/20316497-20316497 FN2388 SNP T -> C AC=2;AN=200;BQB=0.841749;DP=4747;DP4=2566,1731,38,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.2048e-25;MQSB=0.870848;RPB=0.547227;SGB=224.656;VDB=0.188982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.7:20321499 chr07:020321499 0 W/20321499-20321499 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.712374;DP=4563;DP4=2213,2086,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.99218e-11;MQSB=0.997242;RPB=0.386618;SGB=29.4849;VDB=0.956773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.7:20321540 chr07:020321540 0 W/20321540-20321540 FN3970-S SNP C -> T AC=1;AN=168;BQB=0.705132;DP=2379;DP4=1131,1115,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.35587e-11;MQSB=0.992729;RPB=0.599468;SGB=46.4929;VDB=0.934544;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.7:20333955 chr07:020333955 0 W/20333955-20333955 FN-384 Single Base Substitution C-T INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN-115.SNP.7:20336013 chr07:020336013 0 W/20336013-20336013 FN-115 Single Base Substitution A-G INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3480-S.SNP.7:20343127 chr07:020343127 0 W/20343127-20343127 FN3480-S SNP T -> G AC=1;AN=184;BQB=0.929518;DP=2054;DP4=774,1203,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42212e-08;MQSB=0.956505;RPB=0.0295257;SGB=62.3078;VDB=0.182042;EFF=INTRON(MODIFIER||||485|LOC_Os07g34030|protein_coding|CODING|LOC_Os07g34030.1|4|1),INTRON(MODIFIER||||396|LOC_Os07g34030|protein_coding|CODING|LOC_Os07g34030.2|4|1) FN1712-S.SNP.7:20345274 chr07:020345274 0 W/20345274-20345274 FN1712-S SNP A -> T AC=1;AN=188;BQB=0.617369;DP=3286;DP4=1888,1370,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.217894;MQB=0.983859;MQSB=0;RPB=0.634975;SGB=-35.9944;VDB=0.720673;EFF=INTRON(MODIFIER||||485|LOC_Os07g34030|protein_coding|CODING|LOC_Os07g34030.1|8|1),INTRON(MODIFIER||||396|LOC_Os07g34030|protein_coding|CODING|LOC_Os07g34030.2|8|1) FN_776-5-1.SNP.7:20346319 chr07:020346319 0 W/20346319-20346319 FN_776-5-1 Single Base Substitution T-A HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN-107.SNP.7:20349655 chr07:020349655 0 W/20349655-20349655 FN-107 Single Base Substitution A-T INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-374.SNP.7:20349655 chr07:020349655 0 W/20349655-20349655 FN-374 Single Base Substitution A-T INTERGENIC HOMO SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1633-S.SNP.7:20349655 chr07:020349655 0 W/20349655-20349655 FN1633-S Single Base Substitution A-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3056-S.SNP.7:20349655 chr07:020349655 0 W/20349655-20349655 FN3056-S SNP A -> T AC=2;AN=184;BQB=0.899219;DP=3438;DP4=1510,1770,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.60168e-18;MQSB=0.996854;RPB=0.945738;SGB=92.0965;VDB=0.171942;EFF=INTERGENIC(MODIFIER||||||||||1) FN736-S.SNP.7:20350370 chr07:020350370 0 W/20350370-20350370 FN736-S Single Base Substitution G-T INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN736-S.SNP.7:20350371 chr07:020350371 0 W/20350371-20350371 FN736-S Single Base Substitution G-T INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN3849-S.SNP.7:20350687 chr07:020350687 0 W/20350687-20350687 FN3849-S SNP T -> G AC=1;AN=158;BQB=0.999324;DP=2228;DP4=970,1080,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.036e-05;MQSB=0.880947;RPB=0.985519;SGB=9.60209;VDB=0.772968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.7:20353357 chr07:020353357 0 W/20353357-20353357 FN2782-S SNP A -> G AC=1;AN=198;BQB=0.984891;DP=4308;DP4=1851,2237,10,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.5821e-19;MQSB=0.95925;RPB=0.392356;SGB=136.856;VDB=0.136786;EFF=INTRON(MODIFIER||||179|LOC_Os07g34060|protein_coding|CODING|LOC_Os07g34060.1|2|1) FN-154.SNP.7:20354895 chr07:020354895 0 W/20354895-20354895 FN-154 Single Base Substitution T-C INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN2418.SNP.7:20355126 chr07:020355126 0 W/20355126-20355126 FN2418 SNP A -> G AC=1;AN=200;BQB=0.466739;DP=4868;DP4=2341,2077,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19971e-05;MQSB=0.995833;RPB=0.530294;SGB=-0.141083;VDB=0.487101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.7:20355233 chr07:020355233 0 W/20355233-20355233 FN2546-S SNP T -> A AC=1;AN=198;BQB=0.99999;DP=4043;DP4=2083,1738,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10892e-09;MQSB=0.872327;RPB=0.0990666;SGB=50.9344;VDB=0.592405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.7:20356178 chr07:020356178 0 W/20356178-20356178 FN2310 SNP C -> A AC=1;AN=192;BQB=0.488429;DP=5226;DP4=2448,2419,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08219e-14;MQSB=0.85678;RPB=0.464815;SGB=-7.9965;VDB=0.0599044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.7:20360964 chr07:020360964 0 W/20360964-20360964 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.617711;DP=5305;DP4=2944,2165,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68821e-08;MQSB=0.869281;RPB=0.960558;SGB=63.4749;VDB=0.43361;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.7:20368633 chr07:020368633 0 W/20368633-20368633 FN436-S Single Base Substitution G-T INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2780-S.SNP.7:20369485 chr07:020369485 0 W/20369485-20369485 FN2780-S SNP C -> A AC=1;AN=198;BQB=0.573748;DP=4239;DP4=1827,2051,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.15189e-11;MQSB=0.944363;RPB=0.868033;SGB=-39.0698;VDB=0.140543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.7:20370270 chr07:020370270 0 W/20370270-20370270 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN-28.SNP.7:20371896 chr07:020371896 0 W/20371896-20371896 FN-28 Single Base Substitution T-A INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN1022-S.SNP.7:20374811 chr07:020374811 0 W/20374811-20374811 FN1022-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN544-S.SNP.7:20385175 chr07:020385175 0 W/20385175-20385175 FN544-S Single Base Substitution G-A INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2473.SNP.7:20385423 chr07:020385423 0 W/20385423-20385423 FN2473 SNP T -> C AC=2;AN=200;BQB=0.977887;DP=4584;DP4=2052,2197,11,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.15652e-06;MQSB=4.34357e-17;RPB=0.47863;SGB=76.3213;VDB=0.0308524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.7:20388284 chr07:020388284 0 W/20388284-20388284 FN1490-S Single Base Substitution A-T INTRON Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2537-S.SNP.7:20394152 chr07:020394152 0 W/20394152-20394152 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.989871;DP=4301;DP4=1889,2104,4,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.1946e-10;MQSB=0.434482;RPB=0.964527;SGB=31.9395;VDB=0.191244;EFF=INTRON(MODIFIER||||364|LOC_Os07g34110|protein_coding|CODING|LOC_Os07g34110.1|4|1) FN3756-S.SNP.7:20396589 chr07:020396589 0 W/20396589-20396589 FN3756-S SNP G -> A AC=1;AN=190;BQB=0.410362;DP=2266;DP4=1080,1114,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16082e-05;MQSB=0.999177;RPB=0.543357;SGB=32.5467;VDB=0.114178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.7:20401329 chr07:020401329 0 W/20401329-20401329 FN3375-S SNP C -> T AC=2;AN=184;BQB=0.875025;DP=3623;DP4=1476,1905,14,21;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0;MQB=3.00221e-08;MQSB=7.9899e-11;RPB=0.994303;SGB=34.1945;VDB=0.761873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.7:20411623 chr07:020411623 0 W/20411623-20411623 FN2202-S SNP G -> T AC=1;AN=190;BQB=0.37137;DP=5354;DP4=2542,2555,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.82319e-09;MQSB=0.232179;RPB=0.249578;SGB=23.6597;VDB=0.282437;EFF=INTRON(MODIFIER||||451|LOC_Os07g34130|protein_coding|CODING|LOC_Os07g34130.1|1|1) FN-160.SNP.7:20420896 chr07:020420896 0 W/20420896-20420896 FN-160 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g34140 chalcone synthase, putative, expressed SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1754-S.SNP.7:20426070 chr07:020426070 0 W/20426070-20426070 FN1754-S SNP A -> T AC=1;AN=188;BQB=0.858219;DP=2969;DP4=1426,1519,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000336814;MQB=2.14176e-07;MQSB=0.917126;RPB=0.949754;SGB=2.45162;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.7:20426490 chr07:020426490 0 W/20426490-20426490 FN3482-S SNP C -> G AC=1;AN=184;BQB=0.800757;DP=2062;DP4=1027,968,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.57518e-11;MQSB=0.970151;RPB=0.995082;SGB=63.9222;VDB=0.210109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.7:20440082 chr07:020440082 0 W/20440082-20440082 FN2451 SNP C -> T AC=1;AN=200;BQB=0.968455;DP=3791;DP4=1536,2050,8,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.9898e-15;MQSB=0.998254;RPB=0.937066;SGB=123.342;VDB=0.18059;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.7:20450140 chr07:020450140 0 W/20450140-20450140 FN-353 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2583-S.SNP.7:20452741 chr07:020452741 0 W/20452741-20452741 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.972115;DP=4817;DP4=2167,2400,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207598;MQB=9.65155e-10;MQSB=0.73913;RPB=0.674243;SGB=63.4749;VDB=0.60638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:20453759 chr07:020453759 0 W/20453759-20453759 FN2218-S SNP A -> T AC=2;AN=190;BQB=0.114552;DP=4215;DP4=1717,1951,16,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000237248;MQB=2.03523e-15;MQSB=0.0377104;RPB=0.983874;SGB=-95.0261;VDB=0.840043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.7:20453919 chr07:020453919 0 W/20453919-20453919 FN3808-S SNP T -> A AC=1;AN=190;BQB=0.693552;DP=2778;DP4=1401,1278,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000359971;MQB=6.43082e-05;MQSB=0.966057;RPB=0.981679;SGB=21.8853;VDB=0.620767;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.7:20454977 chr07:020454977 0 W/20454977-20454977 W577-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN-108.SNP.7:20457473 chr07:020457473 0 W/20457473-20457473 FN-108 Single Base Substitution A-G INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN846-S.SNP.7:20473417 chr07:020473417 0 W/20473417-20473417 FN846-S Single Base Substitution G-T INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1631-S.SNP.7:20473670 chr07:020473670 0 W/20473670-20473670 FN1631-S Single Base Substitution A-G INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1025-S.SNP.7:20475624 chr07:020475624 0 W/20475624-20475624 FN1025-S Single Base Substitution G-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3432-S.SNP.7:20475695 chr07:020475695 0 W/20475695-20475695 FN3432-S SNP T -> A AC=1;AN=184;BQB=0.807151;DP=2883;DP4=1334,1398,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26623e-11;MQSB=0.998291;RPB=0.999105;SGB=56.8786;VDB=0.922525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.7:20476255 chr07:020476255 0 W/20476255-20476255 FN2395 SNP T -> C AC=1;AN=200;BQB=0.623342;DP=3895;DP4=1401,2304,5,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000256739;MQB=1.65826e-05;MQSB=0;RPB=0.99828;SGB=45.0543;VDB=0.750607;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.7:20477978 chr07:020477978 0 W/20477978-20477978 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.912146;DP=3549;DP4=1832,1616,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.06443e-10;MQSB=0.958632;RPB=0.968325;SGB=80.9724;VDB=0.423896;EFF=INTRON(MODIFIER||||117|LOC_Os07g34220|protein_coding|CODING|LOC_Os07g34220.1|1|1) FN4204-S.SNP.7:20485254 chr07:020485254 0 W/20485254-20485254 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.997822;DP=2637;DP4=1295,1253,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.24641e-06;MQSB=0.924055;RPB=0.631058;SGB=7.67082;VDB=0.912856;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F76|439|LOC_Os07g34240|protein_coding|CODING|LOC_Os07g34240.1|1|1) FN2290.SNP.7:20488931 chr07:020488931 0 W/20488931-20488931 FN2290 SNP C -> T AC=1;AN=192;BQB=0.130526;DP=4993;DP4=2610,2077,20,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000801122;MQB=1.15963e-12;MQSB=0.987306;RPB=0.999824;SGB=-44.0408;VDB=0.0823028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.7:20499252 chr07:020499252 0 W/20499252-20499252 FN2479 SNP G -> A AC=2;AN=200;BQB=0.368629;DP=3477;DP4=1274,1857,19,28;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.48742e-16;MQSB=0.0389663;RPB=0.738461;SGB=93.1709;VDB=0.524896;EFF=INTRON(MODIFIER||||335|LOC_Os07g34250|protein_coding|CODING|LOC_Os07g34250.1|4|1) FN939-S.SNP.7:20500167 chr07:020500167 0 W/20500167-20500167 FN939-S Single Base Substitution C-T INTRON HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN1233-S.SNP.7:20510796 chr07:020510796 0 W/20510796-20510796 FN1233-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN2689-S.SNP.7:20517202 chr07:020517202 0 W/20517202-20517202 FN2689-S SNP T -> C AC=1;AN=200;BQB=0.773699;DP=4897;DP4=2395,2308,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22489e-11;MQSB=0.976754;RPB=0.796842;SGB=37.3004;VDB=0.671246;EFF=INTRON(MODIFIER||||159|LOC_Os07g34270|protein_coding|CODING|LOC_Os07g34270.1|1|1) FN-218.SNP.7:20522498 chr07:020522498 0 W/20522498-20522498 FN-218 Single Base Substitution C-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3595-S.SNP.7:20525655 chr07:020525655 0 W/20525655-20525655 FN3595-S SNP G -> C AC=2;AN=190;BQB=0.948855;DP=2621;DP4=1225,1312,9,4;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=7.08727e-08;MQSB=0.00140593;RPB=0.645615;SGB=53.6492;VDB=0.00638921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.7:20526831 chr07:020526831 0 W/20526831-20526831 FN1025-S Single Base Substitution T-C INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1239-S.SNP.7:20532060 chr07:020532060 0 W/20532060-20532060 FN1239-S Single Base Substitution C-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN482-S.SNP.7:20607633 chr07:020607633 0 W/20607633-20607633 FN482-S Single Base Substitution T-G INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN987-S.SNP.7:20614880 chr07:020614880 0 W/20614880-20614880 FN987-S Single Base Substitution C-A INTERGENIC HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN969-S.SNP.7:20619581 chr07:020619581 0 W/20619581-20619581 FN969-S Single Base Substitution T-A INTRON HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN469-S.SNP.7:20621160 chr07:020621160 0 W/20621160-20621160 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN-399.SNP.7:20622117 chr07:020622117 0 W/20622117-20622117 FN-399 Single Base Substitution G-C INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.7:20622117 chr07:020622117 0 W/20622117-20622117 FN399-S Single Base Substitution G-C INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN919-S.SNP.7:20629402 chr07:020629402 0 W/20629402-20629402 FN919-S Single Base Substitution T-C INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2542-S.SNP.7:20630996 chr07:020630996 0 W/20630996-20630996 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.439323;DP=5725;DP4=3302,2091,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000174672;MQB=3.35923e-09;MQSB=0.000607593;RPB=0.998922;SGB=39.7248;VDB=0.390479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.7:20631875 chr07:020631875 0 W/20631875-20631875 FN2386 SNP G -> C AC=1;AN=192;BQB=0.420166;DP=8560;DP4=3986,3897,17,18;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.00502336;MQB=0.688136;MQSB=1.4329e-11;RPB=0.982039;SGB=-4.04606;VDB=0.197584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.7:20650197 chr07:020650197 0 W/20650197-20650197 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.991941;DP=2823;DP4=1513,1188,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=6.71185e-05;MQSB=1.80952e-05;RPB=0.837936;SGB=66.8296;VDB=0.946589;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.7:20650492 chr07:020650492 0 W/20650492-20650492 FN525-S Single Base Substitution C-A INTRON HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3057-S.SNP.7:20653013 chr07:020653013 0 W/20653013-20653013 FN3057-S SNP G -> T AC=1;AN=184;BQB=0.749395;DP=3481;DP4=2028,1322,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000579457;MQSB=0.998577;RPB=0.900534;SGB=35.1773;VDB=0.951216;EFF=INTRON(MODIFIER||||372|LOC_Os07g34440|protein_coding|CODING|LOC_Os07g34440.1|1|1) FN1422-S.SNP.7:20691102 chr07:020691102 0 W/20691102-20691102 FN1422-S Single Base Substitution C-T UTR_3_PRIME Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3545-S.SNP.7:20701894 chr07:020701894 0 W/20701894-20701894 FN3545-S SNP C -> T AC=1;AN=188;BQB=0.965899;DP=2589;DP4=1343,1191,19,4;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00695249;MQB=0.000795812;MQSB=0.0564079;RPB=0.473583;SGB=98.9552;VDB=0.439392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.7:20719123 chr07:020719123 0 W/20719123-20719123 FN2705-S SNP T -> G AC=2;AN=200;BQB=0.0730534;DP=3955;DP4=1824,1890,16,9;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0;MQB=1.30668e-06;MQSB=0.935305;RPB=0.7774;SGB=50.3263;VDB=0.787887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.7:20719134 chr07:020719134 0 W/20719134-20719134 FN2705-S SNP T -> G AC=2;AN=200;BQB=0.0920542;DP=3950;DP4=1828,1848,16,12;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0;MQB=1.87472e-05;MQSB=0.856568;RPB=0.987849;SGB=90.7419;VDB=0.949883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.7:20738741 chr07:020738741 0 W/20738741-20738741 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.928559;DP=3565;DP4=1462,1843,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.28942e-08;MQSB=0.932193;RPB=0.994712;SGB=49.5489;VDB=0.350982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.7:20738742 chr07:020738742 0 W/20738742-20738742 FN2774-S SNP G -> C AC=1;AN=198;BQB=0.650667;DP=3557;DP4=1408,1905,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.75874e-08;MQSB=0.975535;RPB=0.993503;SGB=49.5489;VDB=0.347242;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.7:20743983 chr07:020743983 0 W/20743983-20743983 FN-87 Single Base Substitution T-C INTRON HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3347-S.SNP.7:20744695 chr07:020744695 0 W/20744695-20744695 FN3347-S SNP G -> A AC=2;AN=184;BQB=0.999026;DP=2473;DP4=1156,1212,17,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.92967e-22;MQSB=0.941287;RPB=0.399985;SGB=120.271;VDB=0.774983;EFF=INTRON(MODIFIER||||671|LOC_Os07g34598|protein_coding|CODING|LOC_Os07g34598.1|7|1),INTRON(MODIFIER||||583|LOC_Os07g34598|protein_coding|CODING|LOC_Os07g34598.2|7|1) FN3632-S.SNP.7:20748453 chr07:020748453 0 W/20748453-20748453 FN3632-S SNP C -> G AC=1;AN=190;BQB=0.98572;DP=3118;DP4=1435,1566,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51704e-07;MQSB=0.975352;RPB=0.332911;SGB=36.1006;VDB=0.537189;EFF=INTRON(MODIFIER||||671|LOC_Os07g34598|protein_coding|CODING|LOC_Os07g34598.1|3|1),INTRON(MODIFIER||||583|LOC_Os07g34598|protein_coding|CODING|LOC_Os07g34598.2|3|1) FN3419-S.SNP.7:20750580 chr07:020750580 0 W/20750580-20750580 FN3419-S SNP G -> C AC=2;AN=184;BQB=0.545348;DP=2347;DP4=1102,1150,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.48605e-15;MQSB=0.894724;RPB=0.845306;SGB=130.135;VDB=0.880328;EFF=INTRON(MODIFIER||||144|LOC_Os07g34610|protein_coding|CODING|LOC_Os07g34610.1|1|1),INTRON(MODIFIER||||144|LOC_Os07g34610|protein_coding|CODING|LOC_Os07g34610.2|1|1) FN1680-S.SNP.7:20756646 chr07:020756646 0 W/20756646-20756646 FN1680-S SNP C -> A AC=1;AN=188;BQB=0.644014;DP=3895;DP4=2109,1730,18,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=6.07295e-07;MQSB=0.603204;RPB=0.642804;SGB=25.601;VDB=0.543498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.7:20759009 chr07:020759009 0 W/20759009-20759009 FN2452 SNP G -> A AC=2;AN=200;BQB=0.928306;DP=5008;DP4=2336,2369,18,25;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.21565e-14;MQSB=0.999088;RPB=0.975135;SGB=97.2193;VDB=0.516772;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.7:20763869 chr07:020763869 0 W/20763869-20763869 FN-348 Single Base Substitution A-C INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1292-S.SNP.7:20767441 chr07:020767441 0 W/20767441-20767441 FN1292-S Single Base Substitution T-C SPLICE_SITE_DONOR HET LOC_Os07g34640 pyruvate Pi dikinase regulatory protein, putative, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1366-S.SNP.7:20767926 chr07:020767926 0 W/20767926-20767926 FN1366-S Single Base Substitution G-A INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1453-S.SNP.7:20775089 chr07:020775089 0 W/20775089-20775089 FN1453-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2422.SNP.7:20777070 chr07:020777070 0 W/20777070-20777070 FN2422 SNP A -> G AC=2;AN=200;BQB=0.80949;DP=4723;DP4=2305,2090,28,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.55232e-30;MQSB=0.972018;RPB=0.996312;SGB=173.661;VDB=0.324084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.7:20780517 chr07:020780517 0 W/20780517-20780517 FN2422 SNP T -> A AC=2;AN=200;BQB=0.852715;DP=4371;DP4=2041,2032,22,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.02252e-25;MQSB=0.997288;RPB=0.957807;SGB=155.635;VDB=0.736602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.7:20781538 chr07:020781538 0 W/20781538-20781538 FN2366 SNP G -> A AC=1;AN=192;BQB=0.393183;DP=4702;DP4=2244,2147,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.41696e-13;MQSB=0.838965;RPB=0.503291;SGB=18.3052;VDB=0.397076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN-131 Single Base Substitution G-A INTRON HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-182.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN-182 Single Base Substitution G-A INTRON HOMO SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN-205.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN-205 Single Base Substitution G-A INTRON HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-72.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN-72 Single Base Substitution G-A INTRON HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1272-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN1272-S Single Base Substitution G-A INTRON HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1462-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN1462-S Single Base Substitution G-A INTRON Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1718-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN1718-S SNP G -> A AC=2;AN=188;BQB=0.00972931;DP=2624;DP4=1420,1113,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.52516e-10;MQSB=0.962406;RPB=0.56493;SGB=-220.194;VDB=0.912666;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN2167-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN2167-S SNP G -> A AC=2;AN=168;BQB=0.527966;DP=3071;DP4=1615,1353,20,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.11921e-15;MQSB=0.994873;RPB=0.984123;SGB=-162.292;VDB=0.168799;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN2207-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.997375;DP=4466;DP4=2186,1814,17,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.78269e-13;MQSB=0.676742;RPB=0.928568;SGB=78.7471;VDB=0.578243;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN3419-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN3419-S SNP G -> A AC=2;AN=184;BQB=0.993869;DP=2848;DP4=1427,1290,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.46817e-14;MQSB=0.717579;RPB=0.994403;SGB=107.526;VDB=0.579518;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN3527-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN3527-S SNP G -> A AC=2;AN=188;BQB=0.961666;DP=2892;DP4=1447,1323,14,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.42576e-16;MQSB=0.970241;RPB=0.960699;SGB=99.7635;VDB=0.138388;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN3889-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN3889-S SNP G -> A AC=2;AN=158;BQB=0.593433;DP=2345;DP4=1158,1065,12,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.13517e-09;MQSB=0.918868;RPB=0.83202;SGB=67.7679;VDB=0.193251;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN4039-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN4039-S SNP G -> A AC=2;AN=168;BQB=0.984218;DP=2515;DP4=1266,1092,12,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.09532e-14;MQSB=0.999731;RPB=0.196645;SGB=140.789;VDB=0.229981;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN4074-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN4074-S SNP G -> A AC=2;AN=182;BQB=0.998324;DP=2961;DP4=1532,1296,17,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.40906e-15;MQSB=0.84481;RPB=0.86968;SGB=88.2906;VDB=0.543575;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN4344-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN4344-S SNP G -> A AC=2;AN=170;BQB=0.994965;DP=2499;DP4=1282,1086,11,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.85896e-15;MQSB=0.99707;RPB=0.996431;SGB=132.282;VDB=0.59413;EFF=INTRON(MODIFIER||||338|LOC_Os07g34670|protein_coding|CODING|LOC_Os07g34670.1|2|1) FN441-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN441-S Single Base Substitution G-A INTRON HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN512-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN512-S Single Base Substitution G-A INTRON HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN601-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN601-S Single Base Substitution G-A INTRON HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN669-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN669-S Single Base Substitution G-A INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN711-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN711-S Single Base Substitution G-A INTRON HOMO SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN791-S.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 FN791-S Single Base Substitution G-A INTRON HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. W470-2-1.SNP.7:20783800 chr07:020783800 0 W/20783800-20783800 W470-2-1 Single Base Substitution G-A INTRON HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1320-S.SNP.7:20789898 chr07:020789898 0 W/20789898-20789898 FN1320-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1320-S.SNP.7:20789899 chr07:020789899 0 W/20789899-20789899 FN1320-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1070-S.SNP.7:20795927 chr07:020795927 0 W/20795927-20795927 FN1070-S Single Base Substitution C-G INTERGENIC HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3447-S.SNP.7:20800395 chr07:020800395 0 W/20800395-20800395 FN3447-S SNP G -> A AC=1;AN=184;BQB=0.799988;DP=2485;DP4=1247,1180,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.49055e-09;MQSB=0.89232;RPB=0.91759;SGB=71.3514;VDB=0.556242;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.7:20803655 chr07:020803655 0 W/20803655-20803655 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN-89.SNP.7:20805569 chr07:020805569 0 W/20805569-20805569 FN-89 Single Base Substitution A-T INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN418-S.SNP.7:20809168 chr07:020809168 0 W/20809168-20809168 FN418-S Single Base Substitution G-T INTRON HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2278-S.SNP.7:20811284 chr07:020811284 0 W/20811284-20811284 FN2278-S SNP C -> A AC=1;AN=190;BQB=0.869083;DP=4923;DP4=2306,2310,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.59898e-16;MQSB=0.989954;RPB=0.935036;SGB=56.8601;VDB=0.408049;EFF=INTRON(MODIFIER||||370|LOC_Os07g34730|protein_coding|CODING|LOC_Os07g34730.1|2|1) FN682-S.SNP.7:20819028 chr07:020819028 0 W/20819028-20819028 FN682-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN456-S.SNP.7:20823905 chr07:020823905 0 W/20823905-20823905 FN456-S Single Base Substitution C-T INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN4031-S.SNP.7:20831693 chr07:020831693 0 W/20831693-20831693 FN4031-S SNP C -> T AC=2;AN=168;BQB=0.932093;DP=2663;DP4=1308,1177,54,30;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.0176493;MQB=0;MQSB=5.69606e-05;RPB=0.521506;SGB=-923.004;VDB=0.537367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A770T|1199|LOC_Os07g34770|protein_coding|CODING|LOC_Os07g34770.1|2|1) FN849-S.SNP.7:20841954 chr07:020841954 0 W/20841954-20841954 FN849-S Single Base Substitution C-T INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN718-S.SNP.7:20842447 chr07:020842447 0 W/20842447-20842447 FN718-S Single Base Substitution G-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2204-S.SNP.7:20856579 chr07:020856579 0 W/20856579-20856579 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.0074286;DP=3251;DP4=1505,1427,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.147954;MQB=0.911684;MQSB=0;RPB=0.875298;SGB=62.7569;VDB=0.816693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A485T|1069|LOC_Os07g34800|protein_coding|CODING|LOC_Os07g34800.1|2|1) FN-273.SNP.7:20858481 chr07:020858481 0 W/20858481-20858481 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2562-S.SNP.7:20859206 chr07:020859206 0 W/20859206-20859206 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.237535;DP=3930;DP4=1653,1857,16,15;HOB=5.10152e-05;ICB=0.000102546;MQ=25;MQ0F=0.109669;MQB=0.519589;MQSB=0;RPB=0.819666;SGB=30.086;VDB=0.215078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1868Q|1951|LOC_Os07g34810|protein_coding|CODING|LOC_Os07g34810.1|3|1) FN-107.SNP.7:20866418 chr07:020866418 0 W/20866418-20866418 FN-107 Single Base Substitution C-T INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3911-S.SNP.7:20867729 chr07:020867729 0 W/20867729-20867729 FN3911-S SNP A -> C AC=2;AN=158;BQB=0.823154;DP=2979;DP4=1199,1528,12,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.19675e-16;MQSB=0.998632;RPB=0.735712;SGB=61.7299;VDB=0.187609;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctC|L217|255|LOC_Os07g34820|protein_coding|CODING|LOC_Os07g34820.1|1|1) FN3785-S.SNP.7:20876147 chr07:020876147 0 W/20876147-20876147 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.99358;DP=3208;DP4=1592,1506,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.1209e-06;MQSB=0.815502;RPB=0.952769;SGB=30.8803;VDB=0.308129;EFF=UTR_3_PRIME(MODIFIER||422||425|LOC_Os07g34830|protein_coding|CODING|LOC_Os07g34830.1|2|1) FN3785-S.SNP.7:20876149 chr07:020876149 0 W/20876149-20876149 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.993581;DP=3184;DP4=1564,1514,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.139e-06;MQSB=0.926158;RPB=0.844739;SGB=35.4339;VDB=0.384453;EFF=UTR_3_PRIME(MODIFIER||424||425|LOC_Os07g34830|protein_coding|CODING|LOC_Os07g34830.1|2|1) FN2314.SNP.7:20886200 chr07:020886200 0 W/20886200-20886200 FN2314 SNP C -> G AC=2;AN=192;BQB=0.772362;DP=4729;DP4=2394,2028,22,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.6215e-20;MQSB=0.946169;RPB=0.997597;SGB=37.0774;VDB=0.864279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.7:20889535 chr07:020889535 0 W/20889535-20889535 FN3310-S SNP G -> T AC=2;AN=184;BQB=0.904169;DP=3235;DP4=1559,1458,23,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.10736e-18;MQSB=0.695113;RPB=0.0166652;SGB=137.88;VDB=0.0745972;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.7:20896348 chr07:020896348 0 W/20896348-20896348 FN662-S Single Base Substitution G-A INTERGENIC HOMO SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN1335-S.SNP.7:20897104 chr07:020897104 0 W/20897104-20897104 FN1335-S Single Base Substitution G-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN541-S.SNP.7:20898811 chr07:020898811 0 W/20898811-20898811 FN541-S Single Base Substitution A-T INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3507-S.SNP.7:20901095 chr07:020901095 0 W/20901095-20901095 FN3507-S SNP C -> T AC=1;AN=188;BQB=0.993416;DP=3947;DP4=1942,1892,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.81306e-13;MQSB=0.920858;RPB=0.873327;SGB=67.8739;VDB=0.802474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R217H|451|LOC_Os07g34870|protein_coding|CODING|LOC_Os07g34870.1|1|1) FN2317.SNP.7:20906054 chr07:020906054 0 W/20906054-20906054 FN2317 SNP G -> A AC=1;AN=192;BQB=0.790913;DP=4844;DP4=1925,2612,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.92114e-06;MQSB=0.95337;RPB=0.763217;SGB=5.79046;VDB=0.437906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.7:20907354 chr07:020907354 0 W/20907354-20907354 FN-174 Single Base Substitution T-C INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3360-S.SNP.7:20909844 chr07:020909844 0 W/20909844-20909844 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.989665;DP=2550;DP4=1134,1357,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.65496e-08;MQSB=0.998948;RPB=0.996878;SGB=32.2261;VDB=0.038601;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.7:20912311 chr07:020912311 0 W/20912311-20912311 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.984762;DP=2617;DP4=1266,1250,34,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.34433e-32;MQSB=0.99356;RPB=0.905947;SGB=232.581;VDB=0.792443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R25W|219|LOC_Os07g34890|protein_coding|CODING|LOC_Os07g34890.1|1|1) FN464-S.SNP.7:20916739 chr07:020916739 0 W/20916739-20916739 FN464-S Single Base Substitution T-A INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN2536-S.SNP.7:20917841 chr07:020917841 0 W/20917841-20917841 FN2536-S SNP T -> C AC=1;AN=198;BQB=0.810503;DP=4011;DP4=2022,1822,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.42305e-08;MQSB=0.988441;RPB=0.961428;SGB=49.5489;VDB=0.00254479;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.7:20922025 chr07:020922025 0 W/20922025-20922025 FN-154 Single Base Substitution A-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN-335.SNP.7:20922143 chr07:020922143 0 W/20922143-20922143 FN-335 Single Base Substitution C-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1001-S.SNP.7:20922143 chr07:020922143 0 W/20922143-20922143 FN1001-S Single Base Substitution C-A INTERGENIC HOMO SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1097-S.SNP.7:20922143 chr07:020922143 0 W/20922143-20922143 FN1097-S Single Base Substitution C-A INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN628-S.SNP.7:20922143 chr07:020922143 0 W/20922143-20922143 FN628-S Single Base Substitution C-A INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-145.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN-145 Single Base Substitution C-T INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN1650-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN1650-S Single Base Substitution C-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1761-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN1761-S SNP C -> T AC=2;AN=188;BQB=0.0351286;DP=2078;DP4=1110,914,7,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6727e-07;MQSB=0.999985;RPB=0.941009;SGB=10.1681;VDB=0.141833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN2296 SNP C -> T AC=2;AN=192;BQB=0.021272;DP=4397;DP4=2439,1635,21,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000454856;MQB=6.0242e-18;MQSB=0.287776;RPB=0.953108;SGB=157.404;VDB=0.0572221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN2755-S SNP C -> T AC=2;AN=200;BQB=0.21044;DP=4257;DP4=2510,1499,18,6;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.57714e-11;MQSB=0.856928;RPB=0.803499;SGB=47.7211;VDB=0.304345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN3378-S SNP C -> T AC=1;AN=184;BQB=0.461795;DP=2599;DP4=1492,1041,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000384763;MQB=3.7518e-05;MQSB=0.818328;RPB=0.773906;SGB=62.3078;VDB=0.211818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN3832-S SNP C -> T AC=2;AN=190;BQB=0.667356;DP=2257;DP4=1394,773,8,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.22797e-06;MQSB=0.939571;RPB=0.989899;SGB=43.2083;VDB=0.994773;EFF=INTERGENIC(MODIFIER||||||||||1) FN585-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN585-S Single Base Substitution C-T INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN685-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN685-S Single Base Substitution C-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN714-S.SNP.7:20923497 chr07:020923497 0 W/20923497-20923497 FN714-S Single Base Substitution C-T INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN1084-S.SNP.7:20926746 chr07:020926746 0 W/20926746-20926746 FN1084-S Single Base Substitution T-G INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1084-S.SNP.7:20926750 chr07:020926750 0 W/20926750-20926750 FN1084-S Single Base Substitution G-A INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3710-S.SNP.7:20932247 chr07:020932247 0 W/20932247-20932247 FN3710-S SNP G -> A AC=2;AN=190;BQB=0.991794;DP=2980;DP4=1268,1598,5,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.08982e-09;MQSB=0.979517;RPB=0.973725;SGB=62.7569;VDB=0.482854;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T327|458|LOC_Os07g34940|protein_coding|CODING|LOC_Os07g34940.1|1|1) FN420-S.SNP.7:20933386 chr07:020933386 0 W/20933386-20933386 FN420-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN4120-S.SNP.7:20941474 chr07:020941474 0 W/20941474-20941474 FN4120-S SNP T -> A AC=1;AN=182;BQB=0.993374;DP=3193;DP4=1593,1500,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.91556e-13;MQSB=0.984325;RPB=0.615928;SGB=60.2037;VDB=0.988052;EFF=UTR_3_PRIME(MODIFIER||620||125|LOC_Os07g34950|protein_coding|CODING|LOC_Os07g34950.2|5|1),UTR_3_PRIME(MODIFIER||109||148|LOC_Os07g34950|protein_coding|CODING|LOC_Os07g34950.1|6|1) FN2739-S.SNP.7:20944151 chr07:020944151 0 W/20944151-20944151 FN2739-S SNP C -> A AC=1;AN=200;BQB=0.973536;DP=4817;DP4=2273,2249,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20033e-11;MQSB=0.999814;RPB=0.636915;SGB=20.7261;VDB=0.845265;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.7:20953156 chr07:020953156 0 W/20953156-20953156 FN434-S Single Base Substitution G-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN960-S.SNP.7:20957991 chr07:020957991 0 W/20957991-20957991 FN960-S Single Base Substitution G-A INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN960-S.SNP.7:20957992 chr07:020957992 0 W/20957992-20957992 FN960-S Single Base Substitution C-G INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN2556-S.SNP.7:20965081 chr07:020965081 0 W/20965081-20965081 FN2556-S SNP C -> T AC=2;AN=198;BQB=0.996171;DP=4324;DP4=2316,1754,30,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.13457e-30;MQSB=0.994251;RPB=0.787362;SGB=251.734;VDB=0.00815258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.7:20966750 chr07:020966750 0 W/20966750-20966750 FN2531-S SNP T -> A AC=1;AN=198;BQB=0.634726;DP=4126;DP4=1984,1899,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.63206e-11;MQSB=0.973324;RPB=0.97526;SGB=72.5051;VDB=0.341685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.7:20977021 chr07:020977021 0 W/20977021-20977021 FN2142-S SNP T -> A AC=1;AN=168;BQB=0.646243;DP=4023;DP4=1999,1973,3,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50675e-08;MQSB=0.912715;RPB=0.388897;SGB=-17.0958;VDB=0.359018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.7:20978263 chr07:020978263 0 W/20978263-20978263 FN3832-S SNP G -> C AC=1;AN=190;BQB=0.983119;DP=2861;DP4=1380,1380,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00104858;MQB=2.51855e-10;MQSB=0.0764292;RPB=0.821055;SGB=60.9777;VDB=0.773317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.7:20985606 chr07:020985606 0 W/20985606-20985606 FN-241 Single Base Substitution G-A INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1652-S.SNP.7:20989486 chr07:020989486 0 W/20989486-20989486 FN1652-S Single Base Substitution T-C INTERGENIC Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN3357-S.SNP.7:21000195 chr07:021000195 0 W/21000195-21000195 FN3357-S SNP C -> G AC=1;AN=184;BQB=0.837895;DP=3458;DP4=1490,1894,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=26;MQ0F=0.294101;MQB=0.145021;MQSB=3.83659e-16;RPB=0.302562;SGB=42.7914;VDB=0.421428;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P139R|377|LOC_Os07g35050|protein_coding|CODING|LOC_Os07g35050.1|2|1) FN1436-S.SNP.7:21009361 chr07:021009361 0 W/21009361-21009361 FN1436-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1462-S.SNP.7:21018595 chr07:021018595 0 W/21018595-21018595 FN1462-S Single Base Substitution G-A INTERGENIC Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2201-S.SNP.7:21022884 chr07:021022884 0 W/21022884-21022884 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.985812;DP=4746;DP4=2207,2219,23,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.88789e-23;MQSB=0.511236;RPB=0.229395;SGB=49.1735;VDB=0.248241;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1488|1773|LOC_Os07g35100|protein_coding|CODING|LOC_Os07g35100.1|3|1) FN4187-S.SNP.7:21022884 chr07:021022884 0 W/21022884-21022884 FN4187-S SNP C -> T AC=1;AN=170;BQB=0.341239;DP=2608;DP4=1325,1215,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000994465;MQSB=0.553749;RPB=0.905327;SGB=21.1076;VDB=0.326267;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1488|1773|LOC_Os07g35100|protein_coding|CODING|LOC_Os07g35100.1|3|1) FN632-S.SNP.7:21022884 chr07:021022884 0 W/21022884-21022884 FN632-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN853-S.SNP.7:21022884 chr07:021022884 0 W/21022884-21022884 FN853-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3997-S.SNP.7:21025673 chr07:021025673 0 W/21025673-21025673 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.989463;DP=2367;DP4=1094,1160,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00549218;MQB=0.0425092;MQSB=0.151818;RPB=0.470223;SGB=74.3269;VDB=0.318302;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V663I|1773|LOC_Os07g35100|protein_coding|CODING|LOC_Os07g35100.1|2|1) FN1322-S.SNP.7:21026407 chr07:021026407 0 W/21026407-21026407 FN1322-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g35100 retrotransposon protein, putative, unclassified, expressed SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3469-S.SNP.7:21040035 chr07:021040035 0 W/21040035-21040035 FN3469-S SNP C -> T AC=1;AN=184;BQB=0.745887;DP=2904;DP4=771,1964,11,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.92137e-16;MQSB=0.126112;RPB=0.998251;SGB=-9.49613;VDB=0.273169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.7:21043365 chr07:021043365 0 W/21043365-21043365 FN2475 SNP T -> C AC=1;AN=200;BQB=0.725839;DP=5178;DP4=2586,2394,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000193125;MQB=1.5923e-08;MQSB=0.819079;RPB=0.98444;SGB=58.2954;VDB=0.979436;EFF=UTR_3_PRIME(MODIFIER||342||306|LOC_Os07g35130|protein_coding|CODING|LOC_Os07g35130.1|2|1) FN3934-S.SNP.7:21044007 chr07:021044007 0 W/21044007-21044007 FN3934-S SNP C -> T AC=2;AN=158;BQB=0.549226;DP=2475;DP4=1168,1182,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.10596e-16;MQSB=0.847399;RPB=0.448395;SGB=84.6152;VDB=0.701428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.7:21044010 chr07:021044010 0 W/21044010-21044010 FN3934-S SNP G -> A AC=2;AN=158;BQB=0.831529;DP=2449;DP4=1148,1204,14,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.05686e-16;MQSB=0.910164;RPB=0.61009;SGB=103.87;VDB=0.58926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.7:21044866 chr07:021044866 0 W/21044866-21044866 FN3607-S SNP A -> T AC=2;AN=190;BQB=0.998228;DP=2935;DP4=1102,1703,6,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.10209e-10;MQSB=0.977256;RPB=0.404467;SGB=71.8647;VDB=0.946309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1692-S.SNP.7:21046659 chr07:021046659 0 W/21046659-21046659 FN1692-S SNP G -> A AC=1;AN=188;BQB=0.00292356;DP=4189;DP4=1946,2207,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.30506e-05;MQSB=0.997914;RPB=0.64901;SGB=-88.8972;VDB=0.98067;EFF=INTRON(MODIFIER||||699|LOC_Os07g35140|protein_coding|CODING|LOC_Os07g35140.1|1|1),INTRON(MODIFIER||||597|LOC_Os07g35140|protein_coding|CODING|LOC_Os07g35140.2|1|1) FN2410.SNP.7:21052614 chr07:021052614 0 W/21052614-21052614 FN2410 SNP C -> G AC=1;AN=200;BQB=0.878531;DP=4813;DP4=2230,2307,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.0656e-08;MQSB=0.600013;RPB=0.915082;SGB=36.6644;VDB=0.0301552;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.7:21056730 chr07:021056730 0 W/21056730-21056730 FN1624-S Single Base Substitution G-A INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN750-S.SNP.7:21064372 chr07:021064372 0 W/21064372-21064372 FN750-S Single Base Substitution T-C INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN4080-S.SNP.7:21066717 chr07:021066717 0 W/21066717-21066717 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.905299;DP=2888;DP4=1290,1545,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.25127e-08;MQSB=0.88654;RPB=0.883913;SGB=53.1331;VDB=0.547437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.7:21067207 chr07:021067207 0 W/21067207-21067207 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.915088;DP=3813;DP4=1928,1784,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.53688e-08;MQSB=0.977665;RPB=0.903524;SGB=48.7425;VDB=0.40601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.7:21071110 chr07:021071110 0 W/21071110-21071110 FN1122-S Single Base Substitution G-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN-375.SNP.7:21074379 chr07:021074379 0 W/21074379-21074379 FN-375 Single Base Substitution C-T INTRON HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2652-S.SNP.7:21078074 chr07:021078074 0 W/21078074-21078074 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.97271;DP=4825;DP4=2442,2057,10,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.000829016;MQB=0.0225556;MQSB=2.74772e-27;RPB=0.339994;SGB=61.9006;VDB=0.0864828;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.7:21093848 chr07:021093848 0 W/21093848-21093848 FN4167-S SNP G -> A AC=1;AN=170;BQB=0.945335;DP=2917;DP4=1532,1321,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.39693e-09;MQSB=0.987269;RPB=0.459521;SGB=38.3207;VDB=0.131699;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R44|1516|LOC_Os07g35240|protein_coding|CODING|LOC_Os07g35240.1|1|1) FN3363-S.SNP.7:21094369 chr07:021094369 0 W/21094369-21094369 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.923925;DP=3305;DP4=1614,1562,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.13426e-09;MQSB=0.964713;RPB=0.870351;SGB=53.3568;VDB=0.889539;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.7:21094446 chr07:021094446 0 W/21094446-21094446 FN430-S Single Base Substitution A-G INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN946-S.SNP.7:21095607 chr07:021095607 0 W/21095607-21095607 FN946-S Single Base Substitution G-A INTERGENIC HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN1286-S.SNP.7:21102989 chr07:021102989 0 W/21102989-21102989 FN1286-S Single Base Substitution C-T INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3836-S.SNP.7:21103681 chr07:021103681 0 W/21103681-21103681 FN3836-S SNP C -> A AC=1;AN=190;BQB=0.902975;DP=2622;DP4=1364,1183,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0263158;MQB=0.657013;MQSB=1.36879e-13;RPB=0.581851;SGB=36.1006;VDB=0.507471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.7:21109395 chr07:021109395 0 W/21109395-21109395 FN2702-S SNP G -> T AC=1;AN=200;BQB=0.989037;DP=4535;DP4=2120,2185,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1245e-09;MQSB=0.422449;RPB=0.26704;SGB=63.4749;VDB=0.364549;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E291*|382|LOC_Os07g35260|protein_coding|CODING|LOC_Os07g35260.1|9|1),UTR_3_PRIME(MODIFIER||43||309|LOC_Os07g35260|protein_coding|CODING|LOC_Os07g35260.2|8|1) FN814-S.SNP.7:21111849 chr07:021111849 0 W/21111849-21111849 FN814-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g35270 retrotransposon protein, putative, unclassified, expressed SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN504-S.SNP.7:21116013 chr07:021116013 0 W/21116013-21116013 FN504-S Single Base Substitution G-A INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN4031-S.SNP.7:21122257 chr07:021122257 0 W/21122257-21122257 FN4031-S SNP T -> A AC=2;AN=168;BQB=0.363687;DP=2963;DP4=1174,1570,23,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.62553e-16;MQSB=0.896204;RPB=0.859625;SGB=-5.89455;VDB=0.802615;EFF=INTRON(MODIFIER||||679|LOC_Os07g35290|protein_coding|CODING|LOC_Os07g35290.1|1|1) FN2333.SNP.7:21138823 chr07:021138823 0 W/21138823-21138823 FN2333 SNP C -> A AC=1;AN=192;BQB=0.398724;DP=5273;DP4=2265,2747,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0695999;MQB=0.0217125;MQSB=3.01122e-28;RPB=0.325014;SGB=-13.64;VDB=0.093896;EFF=INTRON(MODIFIER||||670|LOC_Os07g35310|protein_coding|CODING|LOC_Os07g35310.1|1|1),INTRON(MODIFIER||||518|LOC_Os07g35310|protein_coding|CODING|LOC_Os07g35310.2|1|1) FN3311-S.SNP.7:21145897 chr07:021145897 0 W/21145897-21145897 FN3311-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN2302.SNP.7:21146439 chr07:021146439 0 W/21146439-21146439 FN2302 SNP G -> T AC=2;AN=192;BQB=0.994334;DP=4531;DP4=1863,2333,28,42;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000220702;MQB=1.96182e-43;MQSB=0.984526;RPB=0.612565;SGB=229.279;VDB=0.357381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.7:21146440 chr07:021146440 0 W/21146440-21146440 FN2302 SNP T -> G AC=2;AN=192;BQB=0.529989;DP=4521;DP4=1818,2309,28,46;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00044238;MQB=2.8026e-45;MQSB=0.999646;RPB=0.877076;SGB=160.43;VDB=0.429251;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.7:21147568 chr07:021147568 0 W/21147568-21147568 FN479-S Single Base Substitution C-A INTRON HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN4247-S.SNP.7:21148057 chr07:021148057 0 W/21148057-21148057 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.990156;DP=2705;DP4=1351,1264,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.09099e-09;MQSB=0.979492;RPB=0.95748;SGB=61.2001;VDB=0.968431;EFF=INTRON(MODIFIER||||678|LOC_Os07g35340|protein_coding|CODING|LOC_Os07g35340.1|4|1),INTRON(MODIFIER||||518|LOC_Os07g35340|protein_coding|CODING|LOC_Os07g35340.2|4|1),INTRON(MODIFIER||||436|LOC_Os07g35340|protein_coding|CODING|LOC_Os07g35340.3|4|1) FN1735-S.SNP.7:21153658 chr07:021153658 0 W/21153658-21153658 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.800861;DP=1098;DP4=363,682,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00117819;MQSB=0.845882;RPB=0.117577;SGB=8.27326;VDB=0.0795038;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.7:21153823 chr07:021153823 0 W/21153823-21153823 FN4021-S SNP C -> T AC=2;AN=168;BQB=0.791919;DP=2440;DP4=1059,1222,12,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.05684e-17;MQSB=0.56699;RPB=0.864116;SGB=73.2319;VDB=0.768051;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.7:21154405 chr07:021154405 0 W/21154405-21154405 FN1193-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g35360 expressed protein SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3529-S.SNP.7:21158111 chr07:021158111 0 W/21158111-21158111 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.920038;DP=4563;DP4=2073,2396,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.71922e-11;MQSB=0.974289;RPB=0.693734;SGB=50.1574;VDB=0.37829;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A181|699|LOC_Os07g35370|protein_coding|CODING|LOC_Os07g35370.1|1|1) FN3944-S.SNP.7:21159509 chr07:021159509 0 W/21159509-21159509 FN3944-S SNP A -> T AC=1;AN=168;BQB=0.719745;DP=3078;DP4=1529,1427,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000128005;MQSB=0.934086;RPB=0.816297;SGB=24.4556;VDB=0.376036;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.7:21183487 chr07:021183487 0 W/21183487-21183487 FN1173-S Single Base Substitution G-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN3513-S.SNP.7:21186315 chr07:021186315 0 W/21186315-21186315 FN3513-S SNP G -> T AC=1;AN=188;BQB=0.997297;DP=3166;DP4=1508,1572,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0176879;MQB=0.00423672;MQSB=0.306764;RPB=0.300256;SGB=62.6088;VDB=0.476193;EFF=INTRON(MODIFIER||||953|LOC_Os07g35430|protein_coding|CODING|LOC_Os07g35430.1|1|1) FN2675-S.SNP.7:21190648 chr07:021190648 0 W/21190648-21190648 FN2675-S SNP C -> T AC=2;AN=200;BQB=0.939829;DP=4669;DP4=2023,2327,22,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.89436e-21;MQSB=0.094308;RPB=0.525972;SGB=166.451;VDB=0.223211;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.7:21200836 chr07:021200836 0 W/21200836-21200836 FN75-S-43 SNP C -> G AC=1;AN=190;BQB=0.999837;DP=4479;DP4=1965,2269,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.269033;MQB=0.9911;MQSB=5.81686e-38;RPB=0.652288;SGB=18.096;VDB=0.203229;EFF=INTRON(MODIFIER||||80|LOC_Os07g35450|protein_coding|CODING|LOC_Os07g35450.1|1|1) FN2765-S.SNP.7:21201885 chr07:021201885 0 W/21201885-21201885 FN2765-S SNP G -> C AC=1;AN=198;BQB=0.464332;DP=3896;DP4=1832,1688,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.012577;MQB=5.10011e-05;MQSB=0.519065;RPB=0.696433;SGB=40.149;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.7:21216384 chr07:021216384 0 W/21216384-21216384 FN4142-S SNP C -> A AC=2;AN=170;BQB=0.961279;DP=2712;DP4=1500,1090,13,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.36681e-13;MQSB=0.953422;RPB=0.901546;SGB=83.4133;VDB=0.686841;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.7:21219739 chr07:021219739 0 W/21219739-21219739 FN-117 Single Base Substitution C-A INTERGENIC HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN405-S.SNP.7:21229462 chr07:021229462 0 W/21229462-21229462 FN405-S Single Base Substitution G-A INTERGENIC HOMO SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN405-S.SNP.7:21229463 chr07:021229463 0 W/21229463-21229463 FN405-S Single Base Substitution G-A INTERGENIC HOMO SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN4074-S.SNP.7:21236834 chr07:021236834 0 W/21236834-21236834 FN4074-S SNP T -> A AC=1;AN=182;BQB=0.72807;DP=3711;DP4=1646,1774,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000269469;MQB=3.48582e-08;MQSB=0.990892;RPB=0.857162;SGB=5.1496;VDB=0.936001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.7:21240030 chr07:021240030 0 W/21240030-21240030 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.927604;DP=3962;DP4=1914,1855,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.8426e-12;MQSB=0.985647;RPB=0.903091;SGB=81.7147;VDB=0.918243;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E124|577|LOC_Os07g35510|protein_coding|CODING|LOC_Os07g35510.1|3|1) FN2530-S.SNP.7:21242475 chr07:021242475 0 W/21242475-21242475 FN2530-S SNP A -> G AC=1;AN=198;BQB=0.988874;DP=4237;DP4=1991,2023,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.6231e-11;MQSB=0.435081;RPB=0.814684;SGB=65.3149;VDB=0.175998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.7:21243852 chr07:021243852 0 W/21243852-21243852 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.978668;DP=2286;DP4=1174,1039,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.57083e-05;MQSB=0.719552;RPB=0.728861;SGB=29.5899;VDB=0.612706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.7:21244112 chr07:021244112 0 W/21244112-21244112 FN-194 Single Base Substitution G-A INTERGENIC HOMO SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1140-S.SNP.7:21249479 chr07:021249479 0 W/21249479-21249479 FN1140-S Single Base Substitution C-T INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2790-S.SNP.7:21251409 chr07:021251409 0 W/21251409-21251409 FN2790-S SNP A -> G AC=1;AN=198;BQB=0.976045;DP=5983;DP4=2241,3429,20,7;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.271436;MQB=0.0696887;MQSB=0;RPB=0.666158;SGB=55.2955;VDB=0.985302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2420.SNP.7:21252988 chr07:021252988 0 W/21252988-21252988 FN2420 SNP G -> A AC=2;AN=200;BQB=0.98162;DP=4764;DP4=1951,2488,38,26;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0193115;MQB=0.915504;MQSB=0;RPB=0.249689;SGB=220.528;VDB=0.0316386;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.7:21258052 chr07:021258052 0 W/21258052-21258052 FN590-S Single Base Substitution A-G INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1410-S.SNP.7:21263739 chr07:021263739 0 W/21263739-21263739 FN1410-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g35530 expressed protein SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN1373-S.SNP.7:21263949 chr07:021263949 0 W/21263949-21263949 FN1373-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g35530 expressed protein SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-36.SNP.7:21267579 chr07:021267579 0 W/21267579-21267579 FN-36 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os07g35540 TKL_IRAK_DUF26-lc.19 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN2385.SNP.7:21270296 chr07:021270296 0 W/21270296-21270296 FN2385 SNP C -> T AC=1;AN=192;BQB=0.620565;DP=3521;DP4=1534,1716,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=9.32541e-08;MQSB=1.24759e-14;RPB=0.978822;SGB=26.3496;VDB=0.169584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.7:21271620 chr07:021271620 0 W/21271620-21271620 FN-166 Single Base Substitution G-A INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3880-S.SNP.7:21273584 chr07:021273584 0 W/21273584-21273584 FN3880-S SNP A -> G AC=1;AN=158;BQB=0.706645;DP=2503;DP4=1173,1220,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=4.95347e-05;MQSB=0.587363;RPB=0.33778;SGB=21.4493;VDB=0.417695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.7:21276374 chr07:021276374 0 W/21276374-21276374 FN2614-S SNP T -> A AC=1;AN=198;BQB=0.842902;DP=4345;DP4=2104,2022,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.02248e-07;MQSB=0.995357;RPB=0.884376;SGB=-16.2163;VDB=0.283476;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN1085-S Single Base Substitution G-C INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2375.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN2375 SNP G -> C AC=1;AN=192;BQB=0.985339;DP=5311;DP4=2359,2554,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000188288;MQB=7.4845e-13;MQSB=0.999436;RPB=0.991022;SGB=15.1765;VDB=0.774491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN2618-S SNP G -> C AC=1;AN=198;BQB=0.954275;DP=4386;DP4=2011,2055,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000227998;MQB=2.37218e-16;MQSB=0.977788;RPB=0.813817;SGB=25.3006;VDB=0.563085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3330-S.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN3330-S SNP G -> C AC=1;AN=184;BQB=0.896243;DP=2556;DP4=1113,1337,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30535e-11;MQSB=0.999923;RPB=0.294964;SGB=14.4113;VDB=0.720865;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN4183-S SNP G -> C AC=2;AN=170;BQB=0.959182;DP=905;DP4=542,326,9,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.24783e-08;MQSB=0.74903;RPB=0.993912;SGB=56.7575;VDB=0.511945;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN964-S Single Base Substitution G-C INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN_N1-116-1.SNP.7:21276557 chr07:021276557 0 W/21276557-21276557 FN_N1-116-1 Single Base Substitution G-C Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN598-S.SNP.7:21277335 chr07:021277335 0 W/21277335-21277335 FN598-S Single Base Substitution T-A INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2639-S.SNP.7:21277846 chr07:021277846 0 W/21277846-21277846 FN2639-S SNP T -> C AC=1;AN=200;BQB=0.970145;DP=5266;DP4=2740,2329,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7672e-13;MQSB=0.949816;RPB=0.999979;SGB=79.9264;VDB=0.821411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.7:21300207 chr07:021300207 0 W/21300207-21300207 FN3286-S SNP G -> A AC=1;AN=184;BQB=0.780672;DP=2873;DP4=1528,1255,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.09907e-09;MQSB=0.579396;RPB=0.529534;SGB=53.2642;VDB=0.545162;EFF=INTRON(MODIFIER||||292|LOC_Os07g35600|protein_coding|CODING|LOC_Os07g35600.1|2|1) FN3286-S.SNP.7:21300208 chr07:021300208 0 W/21300208-21300208 FN3286-S SNP C -> T AC=1;AN=184;BQB=0.42759;DP=2874;DP4=1533,1212,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0734e-10;MQSB=0.630627;RPB=0.434979;SGB=5.28054;VDB=0.645693;EFF=INTRON(MODIFIER||||292|LOC_Os07g35600|protein_coding|CODING|LOC_Os07g35600.1|2|1) FN4120-S.SNP.7:21301408 chr07:021301408 0 W/21301408-21301408 FN4120-S SNP C -> A AC=1;AN=182;BQB=0.998801;DP=2962;DP4=1290,1593,8,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.61606e-13;MQSB=0.770546;RPB=0.975218;SGB=93.7308;VDB=0.152095;EFF=INTRON(MODIFIER||||292|LOC_Os07g35600|protein_coding|CODING|LOC_Os07g35600.1|2|1) FN2574-S.SNP.7:21304968 chr07:021304968 0 W/21304968-21304968 FN2574-S SNP C -> T AC=2;AN=198;BQB=0.470207;DP=3902;DP4=2018,1688,10,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.29497e-09;MQSB=0.544381;RPB=1;SGB=29.3443;VDB=0.436636;EFF=INTRON(MODIFIER||||292|LOC_Os07g35600|protein_coding|CODING|LOC_Os07g35600.1|2|1) FN3825-S.SNP.7:21311699 chr07:021311699 0 W/21311699-21311699 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.878346;DP=2319;DP4=1122,1080,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36991e-07;MQSB=0.834406;RPB=0.999931;SGB=62.7569;VDB=0.520002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.7:21313646 chr07:021313646 0 W/21313646-21313646 FN1152-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN680-S.SNP.7:21314405 chr07:021314405 0 W/21314405-21314405 FN680-S Single Base Substitution G-A INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2403.SNP.7:21340984 chr07:021340984 0 W/21340984-21340984 FN2403 SNP T -> C AC=1;AN=200;BQB=0.274013;DP=5110;DP4=2444,2426,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22025e-09;MQSB=0.0372208;RPB=0.234767;SGB=100.316;VDB=0.0497318;EFF=INTERGENIC(MODIFIER||||||||||1) FN-301.SNP.7:21342301 chr07:021342301 0 W/21342301-21342301 FN-301 Single Base Substitution G-T INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1512-S.SNP.7:21347112 chr07:021347112 0 W/21347112-21347112 FN1512-S Single Base Substitution T-C INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2612-S.SNP.7:21347823 chr07:021347823 0 W/21347823-21347823 FN2612-S SNP G -> A AC=2;AN=198;BQB=0.996065;DP=4439;DP4=2247,1960,28,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.98162e-25;MQSB=0.940641;RPB=0.955432;SGB=109.793;VDB=0.91769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.7:21351429 chr07:021351429 0 W/21351429-21351429 FN3445-S SNP C -> T AC=2;AN=184;BQB=0.892651;DP=3424;DP4=1523,1797,10,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.55225e-13;MQSB=0.7744;RPB=0.735515;SGB=103.004;VDB=0.951191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.7:21357526 chr07:021357526 0 W/21357526-21357526 FN2375 SNP C -> A AC=1;AN=192;BQB=0.999846;DP=4735;DP4=2152,2305,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.10264e-09;MQSB=0.907112;RPB=0.63595;SGB=26.3496;VDB=0.885013;EFF=INTERGENIC(MODIFIER||||||||||1) FN-77.SNP.7:21357983 chr07:021357983 0 W/21357983-21357983 FN-77 Single Base Substitution T-A INTERGENIC HOMO SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN1512-S.SNP.7:21365721 chr07:021365721 0 W/21365721-21365721 FN1512-S Single Base Substitution G-A INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN-307.SNP.7:21374733 chr07:021374733 0 W/21374733-21374733 FN-307 Single Base Substitution T-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2731-S.SNP.7:21391061 chr07:021391061 0 W/21391061-21391061 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.725673;DP=4637;DP4=2323,2054,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9686e-12;MQSB=0.890887;RPB=0.893822;SGB=45.1159;VDB=0.159726;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.7:21393133 chr07:021393133 0 W/21393133-21393133 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.346548;DP=3391;DP4=1902,1373,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000589797;MQB=2.38315e-12;MQSB=0.933692;RPB=0.913889;SGB=60.4004;VDB=0.857753;EFF=UTR_5_PRIME(MODIFIER||748||130|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.2|1|1),UTR_3_PRIME(MODIFIER||12||129|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.3|1|1),INTRON(MODIFIER||||136|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.1|1|1) FN3387-S.SNP.7:21393135 chr07:021393135 0 W/21393135-21393135 FN3387-S SNP A -> C AC=1;AN=184;BQB=0.529968;DP=3403;DP4=1929,1402,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000587717;MQB=5.8953e-13;MQSB=0.977448;RPB=0.771623;SGB=38.4058;VDB=0.841231;EFF=UTR_5_PRIME(MODIFIER||750||130|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.2|1|1),UTR_3_PRIME(MODIFIER||10||129|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.3|1|1),INTRON(MODIFIER||||136|LOC_Os07g35720|protein_coding|CODING|LOC_Os07g35720.1|1|1) FN-411.SNP.7:21394611 chr07:021394611 0 W/21394611-21394611 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN3578-S.SNP.7:21397398 chr07:021397398 0 W/21397398-21397398 FN3578-S SNP T -> A AC=1;AN=188;BQB=0.992807;DP=2787;DP4=1293,1426,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7824e-06;MQSB=0.983442;RPB=0.714787;SGB=44.4357;VDB=0.442189;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.7:21406092 chr07:021406092 0 W/21406092-21406092 FN1624-S Single Base Substitution G-C INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN347-S.SNP.7:21408732 chr07:021408732 0 W/21408732-21408732 FN347-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g35740 TKL_IRAK_DUF26-ld.2 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN4141-S.SNP.7:21415696 chr07:021415696 0 W/21415696-21415696 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.972186;DP=2391;DP4=1141,1199,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000418235;MQB=1.87549e-07;MQSB=0.839835;RPB=0.725345;SGB=43.4296;VDB=0.512353;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K392|657|LOC_Os07g35750|protein_coding|CODING|LOC_Os07g35750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K392|516|LOC_Os07g35750|protein_coding|CODING|LOC_Os07g35750.2|4|1) FN3429-S.SNP.7:21419589 chr07:021419589 0 W/21419589-21419589 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.927401;DP=3142;DP4=1512,1482,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.001099;MQSB=0.539723;RPB=0.744231;SGB=26.1347;VDB=0.93404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.7:21419630 chr07:021419630 0 W/21419630-21419630 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.427829;DP=3058;DP4=1745,1189,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25228e-07;MQSB=0.665001;RPB=0.635346;SGB=-17.653;VDB=0.701275;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.7:21432675 chr07:021432675 0 W/21432675-21432675 FN923-S Single Base Substitution T-A INTERGENIC HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2195-S.SNP.7:21435553 chr07:021435553 0 W/21435553-21435553 FN2195-S SNP C -> G AC=1;AN=190;BQB=0.997252;DP=4497;DP4=1993,2175,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.54081e-09;MQSB=0.323593;RPB=0.946492;SGB=57.4238;VDB=0.615901;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D486H|647|LOC_Os07g35790|protein_coding|CODING|LOC_Os07g35790.1|5|1) FN1523-S.SNP.7:21437104 chr07:021437104 0 W/21437104-21437104 FN1523-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g35790 TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. W470-2-1.SNP.7:21444090 chr07:021444090 0 W/21444090-21444090 W470-2-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g35810 TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2283.SNP.7:21447612 chr07:021447612 0 W/21447612-21447612 FN2283 SNP C -> T AC=1;AN=192;BQB=0.991474;DP=5100;DP4=2549,2309,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000196078;MQB=1.97922e-11;MQSB=0.986094;RPB=0.91983;SGB=85.7252;VDB=0.288792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.7:21454739 chr07:021454739 0 W/21454739-21454739 FN1439-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN-273.SNP.7:21458058 chr07:021458058 0 W/21458058-21458058 FN-273 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g35840 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2619-S.SNP.7:21461453 chr07:021461453 0 W/21461453-21461453 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.190173;DP=4087;DP4=2196,1446,14,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.16595e-14;MQSB=0.857004;RPB=0.0608471;SGB=97.671;VDB=0.59429;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN-132 Single Base Substitution T-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN-36.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN-36 Single Base Substitution T-A INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1119-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN1119-S Single Base Substitution T-A INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1198-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN1198-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1374-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN1374-S Single Base Substitution T-A INTERGENIC Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1660-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN1660-S Single Base Substitution T-A INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3342-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN3342-S SNP T -> A AC=2;AN=184;BQB=0.901531;DP=2245;DP4=1181,918,18,2;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.84051e-12;MQSB=0.959187;RPB=0.35648;SGB=60.4004;VDB=0.467763;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN412-S Single Base Substitution T-A INTERGENIC HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN4204-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN4204-S SNP T -> A AC=2;AN=170;BQB=0.974282;DP=1887;DP4=1064,694,21,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.65547e-13;MQSB=0.861342;RPB=0.99702;SGB=17.3163;VDB=0.955285;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN470-S Single Base Substitution T-A INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN566-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN566-S Single Base Substitution T-A INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN661-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN661-S Single Base Substitution T-A INTERGENIC HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN797-S.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN797-S Single Base Substitution T-A INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN_398-3-4-5.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN_398-3-4-5 Single Base Substitution T-A INTERGENIC HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN_807-3-1.SNP.7:21461588 chr07:021461588 0 W/21461588-21461588 FN_807-3-1 Single Base Substitution T-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2260-S.SNP.7:21475823 chr07:021475823 0 W/21475823-21475823 FN2260-S SNP T -> C AC=1;AN=190;BQB=0.698799;DP=5218;DP4=2507,2412,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27709e-17;MQSB=0.618529;RPB=0.95544;SGB=30.527;VDB=0.329106;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.7:21476762 chr07:021476762 0 W/21476762-21476762 FN2492 SNP C -> T AC=1;AN=200;BQB=0.365496;DP=4815;DP4=2628,1849,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44984e-13;MQSB=0.999817;RPB=0.888966;SGB=39.9056;VDB=0.46281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3912-S.SNP.7:21486847 chr07:021486847 0 W/21486847-21486847 FN3912-S SNP A -> T AC=1;AN=158;BQB=0.913633;DP=2514;DP4=1241,1150,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0194909;MQB=0.0196558;MQSB=0.000336653;RPB=0.405245;SGB=40.8124;VDB=0.751216;EFF=UTR_3_PRIME(MODIFIER||16706||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.4|4|1),UTR_3_PRIME(MODIFIER||16706||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.1|4|1) FN3912-S.SNP.7:21486848 chr07:021486848 0 W/21486848-21486848 FN3912-S SNP A -> T AC=1;AN=158;BQB=0.917571;DP=2514;DP4=1236,1142,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0206842;MQB=0.0226755;MQSB=0.000244961;RPB=0.303236;SGB=40.8124;VDB=0.257185;EFF=UTR_3_PRIME(MODIFIER||16705||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.4|4|1),UTR_3_PRIME(MODIFIER||16705||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.1|4|1) FN3677-S.SNP.7:21495793 chr07:021495793 0 W/21495793-21495793 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.369232;DP=2687;DP4=1393,1218,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00781541;MQB=0.00822756;MQSB=0.00126554;RPB=0.560296;SGB=53.6492;VDB=0.155156;EFF=INTRON(MODIFIER||||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.4|3|1),INTRON(MODIFIER||||167|LOC_Os07g35920|protein_coding|CODING|LOC_Os07g35920.1|3|1) FN1268-S.SNP.7:21508948 chr07:021508948 0 W/21508948-21508948 FN1268-S Single Base Substitution T-C INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1640-S.SNP.7:21512454 chr07:021512454 0 W/21512454-21512454 FN1640-S Single Base Substitution G-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1406-S.SNP.7:21512825 chr07:021512825 0 W/21512825-21512825 FN1406-S Single Base Substitution A-G INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2351.SNP.7:21514011 chr07:021514011 0 W/21514011-21514011 FN2351 SNP A -> G AC=1;AN=192;BQB=0.497351;DP=5210;DP4=2444,2476,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.75746e-08;MQSB=0.874322;RPB=0.913972;SGB=-15.8974;VDB=0.392815;EFF=INTRON(MODIFIER||||996|LOC_Os07g35960|protein_coding|CODING|LOC_Os07g35960.1|1|1) FN1678-S.SNP.7:21525558 chr07:021525558 0 W/21525558-21525558 FN1678-S SNP A -> C AC=1;AN=188;BQB=0.150094;DP=3722;DP4=1923,1726,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.85174e-11;MQSB=0.985929;RPB=0.930239;SGB=-11.1967;VDB=0.478075;EFF=INTRON(MODIFIER||||159|LOC_Os07g35985|protein_coding|CODING|LOC_Os07g35985.1|1|1) FN3947-S.SNP.7:21528869 chr07:021528869 0 W/21528869-21528869 FN3947-S SNP G -> T AC=1;AN=168;BQB=0.852708;DP=2689;DP4=1228,1290,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.28618e-14;MQSB=0.997693;RPB=0.999552;SGB=-11.926;VDB=0.537442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.7:21529815 chr07:021529815 0 W/21529815-21529815 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.965341;DP=3507;DP4=1478,1760,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62207e-08;MQSB=0.915108;RPB=0.958299;SGB=50.3161;VDB=0.881541;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.7:21550109 chr07:021550109 0 W/21550109-21550109 FN4165-S SNP T -> G AC=1;AN=170;BQB=0.992191;DP=2151;DP4=1252,819,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0901906;MQB=0.995422;MQSB=4.71393e-15;RPB=0.805474;SGB=12.556;VDB=0.0263486;EFF=INTRON(MODIFIER||||1812|LOC_Os07g36010|protein_coding|CODING|LOC_Os07g36010.1|5|1) FN2474.SNP.7:21562190 chr07:021562190 0 W/21562190-21562190 FN2474 SNP C -> T AC=1;AN=200;BQB=0.00755332;DP=3546;DP4=1409,1652,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69302e-08;MQSB=0.540517;RPB=0.288433;SGB=20.7261;VDB=0.791333;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.7:21565052 chr07:021565052 0 W/21565052-21565052 FN3364-S SNP A -> G AC=1;AN=184;BQB=0.972127;DP=3920;DP4=1250,2498,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.41561e-07;MQSB=0.0303634;RPB=0.96209;SGB=42.7914;VDB=0.776231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K333E|351|LOC_Os07g36060|protein_coding|CODING|LOC_Os07g36060.1|1|1) FN747-S.SNP.7:21565052 chr07:021565052 0 W/21565052-21565052 FN747-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g36060 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN919-S.SNP.7:21565052 chr07:021565052 0 W/21565052-21565052 FN919-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g36060 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN990-S.SNP.7:21567507 chr07:021567507 0 W/21567507-21567507 FN990-S Single Base Substitution A-T INTRON HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN990-S.SNP.7:21567515 chr07:021567515 0 W/21567515-21567515 FN990-S Single Base Substitution C-G INTRON HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN-151.SNP.7:21582576 chr07:021582576 0 W/21582576-21582576 FN-151 Single Base Substitution A-C INTERGENIC HOMO SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1042-S.SNP.7:21582576 chr07:021582576 0 W/21582576-21582576 FN1042-S Single Base Substitution A-C INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2435.SNP.7:21582576 chr07:021582576 0 W/21582576-21582576 FN2435 SNP A -> C AC=2;AN=200;BQB=0.778527;DP=3963;DP4=1531,2204,17,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31247e-20;MQSB=0.916762;RPB=0.998551;SGB=173.999;VDB=0.252806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.7:21582576 chr07:021582576 0 W/21582576-21582576 FN3376-S SNP A -> C AC=2;AN=184;BQB=0.990943;DP=3129;DP4=1242,1634,19,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.00313e-16;MQSB=0.768342;RPB=0.89453;SGB=109.705;VDB=0.675124;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.7:21584581 chr07:021584581 0 W/21584581-21584581 FN-174 Single Base Substitution C-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3331-S.SNP.7:21587235 chr07:021587235 0 W/21587235-21587235 FN3331-S SNP G -> A AC=1;AN=184;BQB=0.707965;DP=3552;DP4=1751,1637,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.81676e-08;MQSB=0.99796;RPB=0.935471;SGB=25.7969;VDB=0.982415;EFF=INTRON(MODIFIER||||200|LOC_Os07g36120|protein_coding|CODING|LOC_Os07g36120.1|1|1) FN2740-S.SNP.7:21592260 chr07:021592260 0 W/21592260-21592260 FN2740-S SNP T -> C AC=1;AN=200;BQB=0.00054105;DP=4015;DP4=1945,1381,5,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.10181e-06;MQSB=0.215126;RPB=0.0121604;SGB=-241.696;VDB=0.288347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.7:21595020 chr07:021595020 0 W/21595020-21595020 FN2709-S SNP T -> A AC=1;AN=200;BQB=0.965069;DP=5154;DP4=2502,2469,7,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00115e-16;MQSB=0.979511;RPB=0.881062;SGB=23.9365;VDB=0.199995;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K884*|929|LOC_Os07g36150|protein_coding|CODING|LOC_Os07g36150.1|6|1) FN1323-S.SNP.7:21596208 chr07:021596208 0 W/21596208-21596208 FN1323-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1323-S.SNP.7:21596209 chr07:021596209 0 W/21596209-21596209 FN1323-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1232-S.SNP.7:21603165 chr07:021603165 0 W/21603165-21603165 FN1232-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2474.SNP.7:21603784 chr07:021603784 0 W/21603784-21603784 FN2474 SNP C -> A AC=1;AN=200;BQB=0.42278;DP=4679;DP4=2174,2251,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96052e-10;MQSB=0.868722;RPB=0.996462;SGB=68.0801;VDB=0.921221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.7:21606171 chr07:021606171 0 W/21606171-21606171 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.393153;DP=2480;DP4=1056,1336,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000413244;MQSB=0.981142;RPB=0.985443;SGB=21.8853;VDB=0.577326;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G32S|76|LOC_Os07g36160|protein_coding|CODING|LOC_Os07g36160.1|1|1) FN3720-S.SNP.7:21606172 chr07:021606172 0 W/21606172-21606172 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.711309;DP=2470;DP4=1050,1340,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.70147e-05;MQSB=0.998798;RPB=0.913272;SGB=21.8853;VDB=0.441508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G32D|76|LOC_Os07g36160|protein_coding|CODING|LOC_Os07g36160.1|1|1) FN2423.SNP.7:21617735 chr07:021617735 0 W/21617735-21617735 FN2423 SNP A -> T AC=1;AN=200;BQB=0.859173;DP=4657;DP4=2414,1979,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79473e-17;MQSB=0.973655;RPB=0.823389;SGB=132.552;VDB=0.97222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N25Y|571|LOC_Os07g36170|protein_coding|CODING|LOC_Os07g36170.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N25Y|571|LOC_Os07g36170|protein_coding|CODING|LOC_Os07g36170.1|2|1) FN3919-S.SNP.7:21633734 chr07:021633734 0 W/21633734-21633734 FN3919-S SNP G -> A AC=1;AN=158;BQB=0.445326;DP=2509;DP4=1188,1226,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.09752e-06;MQSB=0.914275;RPB=0.869467;SGB=23.8187;VDB=0.755869;EFF=INTERGENIC(MODIFIER||||||||||1) FN-63.SNP.7:21634251 chr07:021634251 0 W/21634251-21634251 FN-63 Single Base Substitution T-C INTRON HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN944-S.SNP.7:21634829 chr07:021634829 0 W/21634829-21634829 FN944-S Single Base Substitution G-T INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2324.SNP.7:21642661 chr07:021642661 0 W/21642661-21642661 FN2324 SNP C -> A AC=1;AN=192;BQB=0.944132;DP=4009;DP4=1744,1991,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000249439;MQB=1.04157e-06;MQSB=0.0315303;RPB=0.610993;SGB=43.3444;VDB=0.586032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.7:21668739 chr07:021668739 0 W/21668739-21668739 FN3902-S SNP G -> T AC=1;AN=158;BQB=0.984196;DP=2776;DP4=1163,1538,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.52156e-05;MQSB=0.999015;RPB=0.965209;SGB=23.9652;VDB=0.439805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L372M|460|LOC_Os07g36250|protein_coding|CODING|LOC_Os07g36250.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L291M|379|LOC_Os07g36250|protein_coding|CODING|LOC_Os07g36250.2|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L291M|379|LOC_Os07g36250|protein_coding|CODING|LOC_Os07g36250.3|7|1) FN2723-S.SNP.7:21679367 chr07:021679367 0 W/21679367-21679367 FN2723-S SNP T -> G AC=1;AN=200;BQB=0.880886;DP=5084;DP4=2592,2236,7,12;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.230921;MQB=0.823783;MQSB=0;RPB=0.735005;SGB=11.0951;VDB=0.295543;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.7:21683175 chr07:021683175 0 W/21683175-21683175 FN321-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g36270 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1657-S.SNP.7:21709894 chr07:021709894 0 W/21709894-21709894 FN1657-S Single Base Substitution A-C INTRON Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1025-S.SNP.7:21717856 chr07:021717856 0 W/21717856-21717856 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1336-S.SNP.7:21720266 chr07:021720266 0 W/21720266-21720266 FN1336-S Single Base Substitution A-G INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1529-S.SNP.7:21725808 chr07:021725808 0 W/21725808-21725808 FN1529-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3294-S.SNP.7:21735227 chr07:021735227 0 W/21735227-21735227 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.922747;DP=2586;DP4=1299,1215,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.21887e-10;MQSB=0.994618;RPB=0.352105;SGB=66.8296;VDB=0.786033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.7:21737095 chr07:021737095 0 W/21737095-21737095 FN2597-S SNP T -> G AC=1;AN=198;BQB=0.987623;DP=5041;DP4=2166,2651,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0882761;MQB=0.452293;MQSB=1.91709e-18;RPB=0.361742;SGB=90.9049;VDB=0.232036;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.7:21746335 chr07:021746335 0 W/21746335-21746335 FN703-S Single Base Substitution G-T INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN2153-S.SNP.7:21749138 chr07:021749138 0 W/21749138-21749138 FN2153-S SNP G -> A AC=1;AN=168;BQB=0.799746;DP=4196;DP4=1923,2216,15,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.02856e-20;MQSB=0.997029;RPB=0.818001;SGB=-141.738;VDB=0.476217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H393Y|542|LOC_Os07g36370|protein_coding|CODING|LOC_Os07g36370.1|2|1) FN2473.SNP.7:21768520 chr07:021768520 0 W/21768520-21768520 FN2473 SNP G -> A AC=1;AN=200;BQB=0.799129;DP=3388;DP4=1294,1909,6,5;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.137544;MQB=0.682199;MQSB=5.95415e-30;RPB=0.877601;SGB=29.4541;VDB=0.113567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.7:21772372 chr07:021772372 0 W/21772372-21772372 FN2140-S SNP A -> G AC=1;AN=168;BQB=0.192063;DP=1530;DP4=855,621,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.66478e-05;MQSB=0.985162;RPB=0.902703;SGB=-2.96336;VDB=0.323435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.7:21775252 chr07:021775252 0 W/21775252-21775252 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.263403;DP=4258;DP4=1967,2068,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.65918e-07;MQSB=0.952612;RPB=0.646084;SGB=43.7442;VDB=0.230248;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.7:21776185 chr07:021776185 0 W/21776185-21776185 FN-156 Single Base Substitution C-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN-332.SNP.7:21780851 chr07:021780851 0 W/21780851-21780851 FN-332 Single Base Substitution G-A INTERGENIC HOMO SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN928-S.SNP.7:21784728 chr07:021784728 0 W/21784728-21784728 FN928-S Single Base Substitution T-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN928-S.SNP.7:21784729 chr07:021784729 0 W/21784729-21784729 FN928-S Single Base Substitution G-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN928-S.SNP.7:21784730 chr07:021784730 0 W/21784730-21784730 FN928-S Single Base Substitution T-A INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3821-S.SNP.7:21796332 chr07:021796332 0 W/21796332-21796332 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.969666;DP=3216;DP4=1794,1254,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000310945;MQB=6.74221e-08;MQSB=0.974151;RPB=0.32957;SGB=26.2136;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.7:21804805 chr07:021804805 0 W/21804805-21804805 FN2686-S SNP A -> T AC=1;AN=200;BQB=0.314588;DP=4446;DP4=2111,1858,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00389956;MQSB=0.0943134;RPB=0.846194;SGB=29.4541;VDB=0.712309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|L122Q|262|LOC_Os07g36450|protein_coding|CODING|LOC_Os07g36450.1|1|1) FN499-S.SNP.7:21808139 chr07:021808139 0 W/21808139-21808139 FN499-S Single Base Substitution A-G INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2117-S.SNP.7:21810390 chr07:021810390 0 W/21810390-21810390 FN2117-S SNP G -> A AC=1;AN=168;BQB=0.529047;DP=2415;DP4=1073,1292,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.89834e-08;MQSB=0.874652;RPB=0.575776;SGB=5.62151;VDB=0.409933;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.7:21812254 chr07:021812254 0 W/21812254-21812254 FN-128 Single Base Substitution A-T INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN2387.SNP.7:21814015 chr07:021814015 0 W/21814015-21814015 FN2387 SNP C -> T AC=1;AN=192;BQB=0.870428;DP=4318;DP4=1975,2052,9,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000231589;MQB=3.02432e-11;MQSB=0.911685;RPB=0.867902;SGB=108.547;VDB=0.884908;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.7:21824239 chr07:021824239 0 W/21824239-21824239 FN2284 SNP G -> C AC=1;AN=192;BQB=0.891513;DP=5422;DP4=2463,2607,19,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.41046e-18;MQSB=0.896923;RPB=0.285699;SGB=62.2505;VDB=0.125985;EFF=INTRON(MODIFIER||||133|LOC_Os07g36490|protein_coding|CODING|LOC_Os07g36490.1|1|1) FN_841-7-2.SNP.7:21826249 chr07:021826249 0 W/21826249-21826249 FN_841-7-2 Single Base Substitution C-T HET SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN1414-S.SNP.7:21831517 chr07:021831517 0 W/21831517-21831517 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN-158.SNP.7:21834750 chr07:021834750 0 W/21834750-21834750 FN-158 Single Base Substitution A-G INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1462-S.SNP.7:21855712 chr07:021855712 0 W/21855712-21855712 FN1462-S Single Base Substitution T-A INTRON Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. W470-2-1.SNP.7:21856441 chr07:021856441 0 W/21856441-21856441 W470-2-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g36560 transferase family protein, putative, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2117-S.SNP.7:21858432 chr07:021858432 0 W/21858432-21858432 FN2117-S SNP A -> G AC=1;AN=168;BQB=0.999976;DP=4236;DP4=1780,2413,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00377715;MQB=2.30911e-10;MQSB=0.0317575;RPB=0.0616919;SGB=44.0621;VDB=0.190486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.7:21858760 chr07:021858760 0 W/21858760-21858760 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.995304;DP=3396;DP4=1861,1482,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.49348e-09;MQSB=0.999913;RPB=0.997077;SGB=-64.9298;VDB=0.987056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.7:21858864 chr07:021858864 0 W/21858864-21858864 FN3522-S SNP T -> A AC=2;AN=188;BQB=0.812972;DP=2809;DP4=1007,1618,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.78882e-10;MQSB=0.711314;RPB=0.826751;SGB=64.3306;VDB=0.985377;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.7:21865245 chr07:021865245 0 W/21865245-21865245 FN666-S Single Base Substitution G-C INTRON HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN-292.SNP.7:21873828 chr07:021873828 0 W/21873828-21873828 FN-292 Single Base Substitution G-A INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-75.SNP.7:21876694 chr07:021876694 0 W/21876694-21876694 FN-75 Single Base Substitution A-C INTERGENIC HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2589-S.SNP.7:21880380 chr07:021880380 0 W/21880380-21880380 FN2589-S SNP A -> G AC=1;AN=198;BQB=0.990952;DP=4481;DP4=2168,2005,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000223164;MQB=2.60499e-09;MQSB=0.994026;RPB=0.98067;SGB=6.15916;VDB=0.183674;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C311|853|LOC_Os07g36590|protein_coding|CODING|LOC_Os07g36590.1|2|1) FN1665-S.SNP.7:21883411 chr07:021883411 0 W/21883411-21883411 FN1665-S Single Base Substitution G-A INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN2462.SNP.7:21888529 chr07:021888529 0 W/21888529-21888529 FN2462 SNP T -> A AC=1;AN=200;BQB=0.994089;DP=5521;DP4=2897,2276,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.03725e-13;MQSB=0.99933;RPB=0.126685;SGB=19.1209;VDB=0.0367711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.7:21889425 chr07:021889425 0 W/21889425-21889425 FN1537-S Single Base Substitution C-T INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1239-S.SNP.7:21891904 chr07:021891904 0 W/21891904-21891904 FN1239-S Single Base Substitution C-T INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3478-S.SNP.7:21903012 chr07:021903012 0 W/21903012-21903012 FN3478-S SNP G -> A AC=1;AN=184;BQB=0.987153;DP=4284;DP4=1935,2249,19,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.14903e-18;MQSB=0.738596;RPB=0.726187;SGB=73.7109;VDB=0.847555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P429L|884|LOC_Os07g36610|protein_coding|CODING|LOC_Os07g36610.1|3|1) FN2152-S.SNP.7:21905176 chr07:021905176 0 W/21905176-21905176 FN2152-S SNP C -> A AC=1;AN=168;BQB=0.288049;DP=2366;DP4=1125,1142,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00916644;MQSB=0.938283;RPB=0.785248;SGB=10.0307;VDB=0.690639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V164F|884|LOC_Os07g36610|protein_coding|CODING|LOC_Os07g36610.1|2|1) FN1163-S.SNP.7:21909550 chr07:021909550 0 W/21909550-21909550 FN1163-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN-333.SNP.7:21914316 chr07:021914316 0 W/21914316-21914316 FN-333 Single Base Substitution A-T INTRON HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1156-S.SNP.7:21921221 chr07:021921221 0 W/21921221-21921221 FN1156-S Single Base Substitution T-C INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN911-S.SNP.7:21921683 chr07:021921683 0 W/21921683-21921683 FN911-S Single Base Substitution T-A INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3805-S.SNP.7:21925142 chr07:021925142 0 W/21925142-21925142 FN3805-S SNP C -> T AC=1;AN=190;BQB=0.999576;DP=2788;DP4=1507,1176,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.26061e-07;MQSB=0.915754;RPB=0.599671;SGB=53.6492;VDB=0.693808;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.7:21930601 chr07:021930601 0 W/21930601-21930601 FN1135-S Single Base Substitution G-A INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3766-S.SNP.7:21937500 chr07:021937500 0 W/21937500-21937500 FN3766-S SNP C -> T AC=2;AN=190;BQB=0.571204;DP=2497;DP4=1339,1027,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.13898e-07;MQSB=0.970129;RPB=0.393599;SGB=76.4186;VDB=0.784482;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.7:21940486 chr07:021940486 0 W/21940486-21940486 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2629-S.SNP.7:21943120 chr07:021943120 0 W/21943120-21943120 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.953032;DP=4928;DP4=2389,2328,16,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05991e-21;MQSB=0.237403;RPB=0.851232;SGB=164.789;VDB=0.79651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.7:21945609 chr07:021945609 0 W/21945609-21945609 FN2640-S SNP C -> A AC=2;AN=200;BQB=0.835798;DP=5052;DP4=2277,2427,26,33;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0.112431;MQB=0.028225;MQSB=0.0138755;RPB=0.998985;SGB=202.502;VDB=0.0782937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R1132L|1669|LOC_Os07g36670|protein_coding|CODING|LOC_Os07g36670.1|3|1) FN1723-S.SNP.7:21951901 chr07:021951901 0 W/21951901-21951901 FN1723-S SNP C -> T AC=1;AN=188;BQB=0.312051;DP=3768;DP4=1882,1838,22,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68244e-14;MQSB=0.940152;RPB=0.440909;SGB=24.0577;VDB=0.220317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.7:21952095 chr07:021952095 0 W/21952095-21952095 FN-176 Single Base Substitution A-C INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN1720-S.SNP.7:21961296 chr07:021961296 0 W/21961296-21961296 FN1720-S SNP C -> T AC=2;AN=188;BQB=0.0592392;DP=1998;DP4=1196,760,9,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.0065983;MQSB=0.999068;RPB=0.290399;SGB=35.9843;VDB=0.687739;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.7:21964961 chr07:021964961 0 W/21964961-21964961 FN-283 Single Base Substitution A-G INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2739-S.SNP.7:21966267 chr07:021966267 0 W/21966267-21966267 FN2739-S SNP G -> C AC=1;AN=200;BQB=0.216897;DP=3911;DP4=1433,1807,9,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0107389;MQB=0.000230086;MQSB=5.48613e-27;RPB=0.521696;SGB=-126.111;VDB=0.506425;EFF=INTERGENIC(MODIFIER||||||||||1) 702-2-1.SNP.7:21967924 chr07:021967924 0 W/21967924-21967924 702-2-1 Single Base Substitution G-C INTERGENIC Homo SNo: 1444, Mutant_ID: 702-2-1, Generation: M2, Mutations: 28, Genes: 16, Seed availability: No. FN584-S.SNP.7:21969682 chr07:021969682 0 W/21969682-21969682 FN584-S Single Base Substitution A-T INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3462-S.SNP.7:21970595 chr07:021970595 0 W/21970595-21970595 FN3462-S SNP G -> A AC=2;AN=184;BQB=0.998726;DP=3320;DP4=1502,1699,12,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.26394e-17;MQSB=0.918232;RPB=0.941647;SGB=106.184;VDB=0.66;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D59N|889|LOC_Os07g36690|protein_coding|CODING|LOC_Os07g36690.1|1|1) FN979-S.SNP.7:21992079 chr07:021992079 0 W/21992079-21992079 FN979-S Single Base Substitution C-T INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN1473-S.SNP.7:21992843 chr07:021992843 0 W/21992843-21992843 FN1473-S Single Base Substitution C-T INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN804-S.SNP.7:21997814 chr07:021997814 0 W/21997814-21997814 FN804-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3658-S.SNP.7:22005925 chr07:022005925 0 W/22005925-22005925 FN3658-S SNP T -> A AC=1;AN=190;BQB=0.774409;DP=3207;DP4=1573,1456,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.73041e-08;MQSB=0.93188;RPB=0.592902;SGB=76.4186;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.7:22008288 chr07:022008288 0 W/22008288-22008288 FN1388-S Single Base Substitution C-T INTRON HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN4070-S.SNP.7:22010521 chr07:022010521 0 W/22010521-22010521 FN4070-S SNP C -> A AC=1;AN=182;BQB=0.999617;DP=2634;DP4=1395,1148,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.18849e-10;MQSB=0.958043;RPB=0.342391;SGB=75.6874;VDB=0.521408;EFF=INTRON(MODIFIER||||889|LOC_Os07g36740|protein_coding|CODING|LOC_Os07g36740.1|2|1) W470-2-1.SNP.7:22010689 chr07:022010689 0 W/22010689-22010689 W470-2-1 Single Base Substitution C-G INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-366.SNP.7:22013481 chr07:022013481 0 W/22013481-22013481 FN-366 Single Base Substitution C-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3457-S.SNP.7:22018489 chr07:022018489 0 W/22018489-22018489 FN3457-S SNP G -> C AC=1;AN=184;BQB=0.85032;DP=2324;DP4=1207,1052,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.84964e-09;MQSB=0.967518;RPB=0.144341;SGB=66.8296;VDB=0.622694;EFF=INTRON(MODIFIER||||868|LOC_Os07g36750|protein_coding|CODING|LOC_Os07g36750.1|1|1) FN2558-S.SNP.7:22021662 chr07:022021662 0 W/22021662-22021662 FN2558-S SNP G -> A AC=2;AN=186;BQB=0.63206;DP=4125;DP4=1729,2014,18,30;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.76152e-28;MQSB=0.967081;RPB=0.816558;SGB=109.793;VDB=0.330631;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.7:22026733 chr07:022026733 0 W/22026733-22026733 FN2293 SNP G -> T AC=1;AN=192;BQB=0.634217;DP=4816;DP4=2336,2107,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00124585;MQB=5.96091e-06;MQSB=0.459794;RPB=0.881995;SGB=2.66176;VDB=0.688029;EFF=INTRON(MODIFIER||||339|LOC_Os07g36760|protein_coding|CODING|LOC_Os07g36760.1|1|1) FN786-S.SNP.7:22027589 chr07:022027589 0 W/22027589-22027589 FN786-S Single Base Substitution C-T INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN1297-S.SNP.7:22041444 chr07:022041444 0 W/22041444-22041444 FN1297-S Single Base Substitution G-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN4088-S.SNP.7:22051761 chr07:022051761 0 W/22051761-22051761 FN4088-S SNP C -> A AC=2;AN=182;BQB=0.389067;DP=2795;DP4=1349,1302,10,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.86376e-11;MQSB=0.203307;RPB=0.192374;SGB=111.774;VDB=0.0435856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A142D|221|LOC_Os07g36810|protein_coding|CODING|LOC_Os07g36810.1|1|1) FN424-S.SNP.7:22056743 chr07:022056743 0 W/22056743-22056743 FN424-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN411-S.SNP.7:22060682 chr07:022060682 0 W/22060682-22060682 FN411-S Single Base Substitution C-T INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1658-S.SNP.7:22073714 chr07:022073714 0 W/22073714-22073714 FN1658-S SNP C -> T AC=2;AN=188;BQB=0.0005771;DP=2966;DP4=1475,1449,16,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.03859e-07;MQSB=0.957743;RPB=0.159176;SGB=-306.067;VDB=0.940735;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.7:22076001 chr07:022076001 0 W/22076001-22076001 FN2387 SNP G -> A AC=1;AN=192;BQB=0.920162;DP=5189;DP4=2459,2418,24,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.72742e-22;MQSB=0.998904;RPB=0.76493;SGB=143.146;VDB=0.0449722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R54Q|278|LOC_Os07g36850|protein_coding|CODING|LOC_Os07g36850.1|1|1) FN3375-S.SNP.7:22079592 chr07:022079592 0 W/22079592-22079592 FN3375-S SNP C -> T AC=2;AN=184;BQB=0.86818;DP=3026;DP4=1178,1696,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.69049e-12;MQSB=0.930714;RPB=0.0577171;SGB=84.9167;VDB=0.548905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.7:22082522 chr07:022082522 0 W/22082522-22082522 FN1661-S Single Base Substitution T-A INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN-269.SNP.7:22084462 chr07:022084462 0 W/22084462-22084462 FN-269 Single Base Substitution C-T INTRON HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1646-S.SNP.7:22087409 chr07:022087409 0 W/22087409-22087409 FN1646-S Single Base Substitution C-A INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN-246.SNP.7:22089512 chr07:022089512 0 W/22089512-22089512 FN-246 Single Base Substitution C-T INTRON HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2666-S.SNP.7:22094637 chr07:022094637 0 W/22094637-22094637 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.800337;DP=5189;DP4=2520,2372,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.87726e-16;MQSB=0.999319;RPB=0.985586;SGB=118.737;VDB=0.689884;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.7:22097045 chr07:022097045 0 W/22097045-22097045 FN-167 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g36900 OsFBL39 - F-box domain and LRR containing protein, expressed SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN4260-S.SNP.7:22097591 chr07:022097591 0 W/22097591-22097591 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.142318;DP=2515;DP4=917,1294,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.85938e-05;MQSB=0.310182;RPB=0.440001;SGB=-35.9837;VDB=0.384464;EFF=INTRON(MODIFIER||||534|LOC_Os07g36900|protein_coding|CODING|LOC_Os07g36900.1|2|1) FN3912-S.SNP.7:22099757 chr07:022099757 0 W/22099757-22099757 FN3912-S SNP T -> C AC=2;AN=158;BQB=0.874983;DP=2617;DP4=1266,1203,11,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000382117;MQB=7.37973e-12;MQSB=0.99993;RPB=0.944267;SGB=47.5132;VDB=0.556139;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.7:22105537 chr07:022105537 0 W/22105537-22105537 FN-228 Single Base Substitution C-T INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1689-S.SNP.7:22110246 chr07:022110246 0 W/22110246-22110246 FN1689-S SNP C -> T AC=1;AN=188;BQB=0.914412;DP=2164;DP4=1080,1013,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.92935e-08;MQSB=0.666615;RPB=0.264058;SGB=-14.9998;VDB=0.836636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.7:22115446 chr07:022115446 0 W/22115446-22115446 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.677774;DP=4649;DP4=2023,2363,20,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0002151;MQB=2.19813e-22;MQSB=0.993464;RPB=0.999644;SGB=92.009;VDB=0.541002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S52I|1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S52I|1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.2|2|1),SPLICE_SITE_REGION(LOW||||1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.1|2|1),SPLICE_SITE_REGION(LOW||||1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.2|2|1) FN2302.SNP.7:22116173 chr07:022116173 0 W/22116173-22116173 FN2302 SNP C -> T AC=2;AN=192;BQB=0.858059;DP=5132;DP4=2357,2502,28,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.11105e-28;MQSB=0.847753;RPB=0.575355;SGB=66.8;VDB=0.0458338;EFF=INTRON(MODIFIER||||1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.1|5|1),INTRON(MODIFIER||||1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.2|5|1) FN3759-S.SNP.7:22117876 chr07:022117876 0 W/22117876-22117876 FN3759-S SNP A -> T AC=1;AN=190;BQB=0.806952;DP=2791;DP4=1310,1376,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.85289e-07;MQSB=0.94653;RPB=0.960215;SGB=58.2031;VDB=0.199423;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E623V|1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E623V|1792|LOC_Os07g36940|protein_coding|CODING|LOC_Os07g36940.2|7|1) FN996-S.SNP.7:22124493 chr07:022124493 0 W/22124493-22124493 FN996-S Single Base Substitution A-T INTERGENIC HOMO SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1625-S.SNP.7:22124902 chr07:022124902 0 W/22124902-22124902 FN1625-S Single Base Substitution G-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.7:22124902 chr07:022124902 0 W/22124902-22124902 FN1626-S SNP G -> A AC=2;AN=188;BQB=0.751688;DP=3104;DP4=971,2081,11,34;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.82228e-20;MQSB=0.97086;RPB=0.569554;SGB=-98.3201;VDB=0.167759;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.7:22132763 chr07:022132763 0 W/22132763-22132763 FN684-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g36970 transposon protein, putative, unclassified, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN751-S.SNP.7:22150071 chr07:022150071 0 W/22150071-22150071 FN751-S Single Base Substitution G-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN751-S.SNP.7:22150072 chr07:022150072 0 W/22150072-22150072 FN751-S Single Base Substitution G-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3938-S.SNP.7:22153173 chr07:022153173 0 W/22153173-22153173 FN3938-S SNP A -> T AC=1;AN=158;BQB=0.959812;DP=2335;DP4=1257,960,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.21502e-08;MQSB=0.990631;RPB=0.961749;SGB=51.4366;VDB=0.555385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.7:22154035 chr07:022154035 0 W/22154035-22154035 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.85877;DP=4475;DP4=2100,2121,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.91709e-16;MQSB=0.279647;RPB=0.841364;SGB=83.5316;VDB=0.277645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.7:22155003 chr07:022155003 0 W/22155003-22155003 FN1204-S Single Base Substitution G-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN4125-S.SNP.7:22166655 chr07:022166655 0 W/22166655-22166655 FN4125-S SNP G -> A AC=1;AN=182;BQB=0.706696;DP=3097;DP4=1554,1477,3,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.12521e-05;MQSB=0.00559838;RPB=0.357028;SGB=48.6223;VDB=0.394297;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S1294N|1296|LOC_Os07g36990|protein_coding|CODING|LOC_Os07g36990.1|3|1) FN2680-S.SNP.7:22173514 chr07:022173514 0 W/22173514-22173514 FN2680-S SNP C -> G AC=1;AN=200;BQB=0.945726;DP=5084;DP4=2569,2273,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45168e-07;MQSB=0.996028;RPB=0.853821;SGB=4.67442;VDB=0.824818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.7:22182188 chr07:022182188 0 W/22182188-22182188 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.774365;DP=3264;DP4=1712,1378,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00201e-05;MQSB=0.495433;RPB=0.684644;SGB=42.7914;VDB=0.718369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.7:22194083 chr07:022194083 0 W/22194083-22194083 FN2288 SNP A -> G AC=2;AN=192;BQB=0.680665;DP=1923;DP4=59,1388,0,14;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=3.36737e-05;MQSB=0.969282;RPB=0.769237;SGB=2.66176;VDB=0.128556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.7:22207314 chr07:022207314 0 W/22207314-22207314 FN2313 SNP C -> T AC=1;AN=192;BQB=0.703393;DP=4500;DP4=2148,1842,11,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23528e-05;MQSB=3.12469e-06;RPB=0.896681;SGB=21.2209;VDB=0.57081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.7:22212973 chr07:022212973 0 W/22212973-22212973 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.671151;DP=2660;DP4=1181,1383,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79181e-06;MQSB=0.971117;RPB=0.944528;SGB=43.2083;VDB=0.377184;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V59|508|LOC_Os07g37080|protein_coding|CODING|LOC_Os07g37080.1|1|1) FN1460-S.SNP.7:22213460 chr07:022213460 0 W/22213460-22213460 FN1460-S Single Base Substitution G-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1434-S.SNP.7:22219296 chr07:022219296 0 W/22219296-22219296 FN1434-S Single Base Substitution T-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2330.SNP.7:22224324 chr07:022224324 0 W/22224324-22224324 FN2330 SNP G -> T AC=1;AN=192;BQB=0.0870011;DP=5031;DP4=2240,2404,10,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.16071e-12;MQSB=0.978569;RPB=0.0690677;SGB=-188.535;VDB=0.488365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2197-S.SNP.7:22240330 chr07:022240330 0 W/22240330-22240330 FN2197-S SNP G -> T AC=1;AN=190;BQB=0.642832;DP=4410;DP4=1681,2434,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000846953;MQSB=0.00317142;RPB=0.529675;SGB=18.3316;VDB=0.691871;EFF=UTR_5_PRIME(MODIFIER||1262||418|LOC_Os07g37110|protein_coding|CODING|LOC_Os07g37110.1|1|1) FN4241-S.SNP.7:22240578 chr07:022240578 0 W/22240578-22240578 FN4241-S SNP A -> G AC=2;AN=170;BQB=0.968371;DP=2817;DP4=1354,1291,33,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.55828e-26;MQSB=0.846993;RPB=0.265988;SGB=155.875;VDB=0.567645;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.7:22242672 chr07:022242672 0 W/22242672-22242672 FN549-S Single Base Substitution C-T INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN889-S.SNP.7:22248973 chr07:022248973 0 W/22248973-22248973 FN889-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g37140 expressed protein SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2174-S.SNP.7:22249476 chr07:022249476 0 W/22249476-22249476 FN2174-S SNP T -> C AC=1;AN=168;BQB=0.0701805;DP=3614;DP4=1891,1698,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00018159;MQSB=0.954114;RPB=0.969149;SGB=-0.101751;VDB=0.534909;EFF=INTRON(MODIFIER||||693|LOC_Os07g37140|protein_coding|CODING|LOC_Os07g37140.1|2|1) FN581-S.SNP.7:22249814 chr07:022249814 0 W/22249814-22249814 FN581-S Single Base Substitution T-C INTRON HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. 705-6.SNP.7:22253406 chr07:022253406 0 W/22253406-22253406 705-6 Single Base Substitution C-T INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1736-S.SNP.7:22264094 chr07:022264094 0 W/22264094-22264094 FN1736-S SNP C -> T AC=2;AN=188;BQB=0.927906;DP=1360;DP4=84,1259,2,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.58671e-08;MQSB=0.971646;RPB=0.901708;SGB=28.6195;VDB=0.908438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.7:22267550 chr07:022267550 0 W/22267550-22267550 FN2692-S SNP T -> G AC=1;AN=200;BQB=0.723121;DP=5041;DP4=2401,2458,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44668e-07;MQSB=0.76824;RPB=0.822239;SGB=24.2746;VDB=0.61371;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.7:22275493 chr07:022275493 0 W/22275493-22275493 FN672-S Single Base Substitution C-T INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN972-S.SNP.7:22283838 chr07:022283838 0 W/22283838-22283838 FN972-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g37190 transposon protein, putative, unclassified, expressed SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2650-S.SNP.7:22286341 chr07:022286341 0 W/22286341-22286341 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.0140194;DP=7416;DP4=4860,2155,11,7;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.133495;MQB=0.233608;MQSB=0;RPB=0.199155;SGB=9.48993;VDB=0.604441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1597I|2027|LOC_Os07g37200|protein_coding|CODING|LOC_Os07g37200.1|2|1) FN629-S.SNP.7:22286973 chr07:022286973 0 W/22286973-22286973 FN629-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g37200 transposon protein, putative, unclassified, expressed SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3475-S.SNP.7:22290806 chr07:022290806 0 W/22290806-22290806 FN3475-S SNP G -> A AC=1;AN=184;BQB=0.92682;DP=5106;DP4=2800,2179,34,21;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.290247;MQB=0.0454593;MQSB=7.1186e-43;RPB=0.365854;SGB=124.147;VDB=0.987151;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S132|2027|LOC_Os07g37200|protein_coding|CODING|LOC_Os07g37200.1|1|1) FN725-S.SNP.7:22292432 chr07:022292432 0 W/22292432-22292432 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN-195.SNP.7:22295868 chr07:022295868 0 W/22295868-22295868 FN-195 Single Base Substitution G-A INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2579-S.SNP.7:22302036 chr07:022302036 0 W/22302036-22302036 FN2579-S SNP A -> T AC=1;AN=198;BQB=0.17069;DP=4318;DP4=2031,2075,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.44402e-09;MQSB=0.996221;RPB=0.979468;SGB=61.7198;VDB=0.394515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.7:22316730 chr07:022316730 0 W/22316730-22316730 FN1186-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g37240 chlorophyll A-B binding protein, putative, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2124-S.SNP.7:22317659 chr07:022317659 0 W/22317659-22317659 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.0160243;DP=2105;DP4=885,1133,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06644e-05;MQSB=0.993061;RPB=0.0895037;SGB=-39.5049;VDB=0.0166568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G73S|290|LOC_Os07g37240|protein_coding|CODING|LOC_Os07g37240.1|1|1) FN2606-S.SNP.7:22318796 chr07:022318796 0 W/22318796-22318796 FN2606-S SNP T -> A AC=2;AN=198;BQB=0.922594;DP=4218;DP4=2124,1807,9,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.03323e-09;MQSB=0.93249;RPB=0.982471;SGB=26.7492;VDB=0.997078;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.7:22326100 chr07:022326100 0 W/22326100-22326100 FN3378-S SNP C -> G AC=1;AN=184;BQB=0.990034;DP=3432;DP4=1971,1342,18,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000291375;MQB=3.35433e-11;MQSB=0.969537;RPB=0.515394;SGB=70.9657;VDB=0.264391;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.7:22328991 chr07:022328991 0 W/22328991-22328991 FN915-S Single Base Substitution T-C INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2153-S.SNP.7:22342272 chr07:022342272 0 W/22342272-22342272 FN2153-S SNP G -> T AC=1;AN=168;BQB=0.686268;DP=4412;DP4=2109,2270,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.21657e-07;MQSB=0.991519;RPB=0.936814;SGB=-15.8033;VDB=0.693077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.7:22348933 chr07:022348933 0 W/22348933-22348933 FN-175 Single Base Substitution T-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1665-S.SNP.7:22350225 chr07:022350225 0 W/22350225-22350225 FN1665-S Single Base Substitution C-T INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3631-S.SNP.7:22350814 chr07:022350814 0 W/22350814-22350814 FN3631-S SNP G -> C AC=2;AN=190;BQB=0.998208;DP=2924;DP4=1516,1272,9,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.94228e-13;MQSB=0.942098;RPB=0.802707;SGB=94.6341;VDB=0.774491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.7:22353100 chr07:022353100 0 W/22353100-22353100 FN2471 SNP G -> A AC=1;AN=200;BQB=0.261678;DP=4093;DP4=1976,1856,7,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56389e-15;MQSB=0.49615;RPB=0.624421;SGB=79.9264;VDB=0.457078;EFF=UTR_3_PRIME(MODIFIER||262||530|LOC_Os07g37320|protein_coding|CODING|LOC_Os07g37320.1|3|1) FN3730-S.SNP.7:22359825 chr07:022359825 0 W/22359825-22359825 FN3730-S SNP C -> T AC=2;AN=190;BQB=0.994399;DP=2699;DP4=1236,1269,18,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44789e-26;MQSB=0.671851;RPB=0.286138;SGB=164.65;VDB=0.254203;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.7:22362442 chr07:022362442 0 W/22362442-22362442 FN1104-S Single Base Substitution G-T INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1104-S.SNP.7:22362443 chr07:022362443 0 W/22362443-22362443 FN1104-S Single Base Substitution A-T INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3799-S.SNP.7:22364122 chr07:022364122 0 W/22364122-22364122 FN3799-S SNP C -> A AC=1;AN=190;BQB=0.970732;DP=2918;DP4=1703,1134,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0003427;MQB=6.21134e-06;MQSB=0.0221597;RPB=0.717604;SGB=53.6492;VDB=0.297237;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.7:22366058 chr07:022366058 0 W/22366058-22366058 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.779585;DP=2568;DP4=1398,1067,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.48978e-06;MQSB=0.831336;RPB=0.214612;SGB=-2.88077;VDB=0.481974;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.7:22374105 chr07:022374105 0 W/22374105-22374105 FN4206-S SNP A -> G AC=2;AN=170;BQB=0.50052;DP=2324;DP4=997,1140,12,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.91803e-14;MQSB=0.329531;RPB=0.797858;SGB=-12.1204;VDB=0.499892;EFF=INTERGENIC(MODIFIER||||||||||1) FN-204.SNP.7:22381002 chr07:022381002 0 W/22381002-22381002 FN-204 Single Base Substitution G-T INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN2544-S.SNP.7:22395007 chr07:022395007 0 W/22395007-22395007 FN2544-S SNP C -> T AC=1;AN=198;BQB=0.577352;DP=3858;DP4=2049,1643,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.44717e-07;MQSB=0.960028;RPB=0.581445;SGB=10.9445;VDB=0.687038;EFF=INTERGENIC(MODIFIER||||||||||1) FN4208-S.SNP.7:22400258 chr07:022400258 0 W/22400258-22400258 FN4208-S SNP G -> C AC=2;AN=170;BQB=0.993599;DP=2043;DP4=1268,689,14,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.42002e-11;MQSB=0.222538;RPB=0.937938;SGB=55.5339;VDB=0.116202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.7:22416810 chr07:022416810 0 W/22416810-22416810 FN3940-S SNP C -> T AC=1;AN=158;BQB=0.943241;DP=2492;DP4=1184,1202,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.1489e-06;MQSB=0.987225;RPB=0.904529;SGB=68.9144;VDB=0.18571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A172V|265|LOC_Os07g37420|protein_coding|CODING|LOC_Os07g37420.1|1|1) FN3879-S.SNP.7:22442566 chr07:022442566 0 W/22442566-22442566 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.989967;DP=2666;DP4=1222,1352,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0;MQB=0.269623;MQSB=0.0597135;RPB=0.22652;SGB=51.4366;VDB=0.590277;EFF=UTR_3_PRIME(MODIFIER||34||235|LOC_Os07g37480|protein_coding|CODING|LOC_Os07g37480.1|1|1) FN1293-S.SNP.7:22444668 chr07:022444668 0 W/22444668-22444668 FN1293-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN3364-S.SNP.7:22457573 chr07:022457573 0 W/22457573-22457573 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.689578;DP=4019;DP4=1972,1932,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.43021e-07;MQSB=0.690555;RPB=0.338304;SGB=49.835;VDB=0.959986;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R319|537|LOC_Os07g37510|protein_coding|CODING|LOC_Os07g37510.1|1|1) FN1371-S.SNP.7:22461145 chr07:022461145 0 W/22461145-22461145 FN1371-S Single Base Substitution C-G INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2379.SNP.7:22482079 chr07:022482079 0 W/22482079-22482079 FN2379 SNP G -> A AC=1;AN=192;BQB=0.269476;DP=2952;DP4=1955,759,15,5;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.000677507;MQB=0.356098;MQSB=4.2406e-22;RPB=0.853126;SGB=61.1661;VDB=0.419868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.7:22486254 chr07:022486254 0 W/22486254-22486254 FN3917-S SNP C -> T AC=1;AN=158;BQB=0.785006;DP=2768;DP4=1484,1191,9,2;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=3.12105e-06;MQSB=0.0825903;RPB=0.992163;SGB=42.6978;VDB=0.768076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P42S|108|LOC_Os07g37540|protein_coding|CODING|LOC_Os07g37540.1|1|1) FN1707-S.SNP.7:22489357 chr07:022489357 0 W/22489357-22489357 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.104136;DP=3449;DP4=1524,1885,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.94276e-07;MQSB=0.992788;RPB=0.388557;SGB=-14.9998;VDB=0.00589069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1225W|1252|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.1|24|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R827W|854|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.3|16|1) FN1707-S.SNP.7:22489359 chr07:022489359 0 W/22489359-22489359 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.0920162;DP=3408;DP4=1508,1855,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.94247e-08;MQSB=0.999879;RPB=0.577155;SGB=-14.4565;VDB=0.0434117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S1224F|1252|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.1|24|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S826F|854|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.3|16|1) FN2713-S.SNP.7:22492252 chr07:022492252 0 W/22492252-22492252 FN2713-S SNP G -> C AC=2;AN=200;BQB=0.846268;DP=4661;DP4=2351,2062,33,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.11691e-31;MQSB=0.958774;RPB=0.301585;SGB=256.892;VDB=0.116175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q773E|1252|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.1|17|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q773E|1054|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.2|17|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q375E|854|LOC_Os07g37560|protein_coding|CODING|LOC_Os07g37560.3|9|1) FN1321-S.SNP.7:22499369 chr07:022499369 0 W/22499369-22499369 FN1321-S Single Base Substitution T-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN-129.SNP.7:22502743 chr07:022502743 0 W/22502743-22502743 FN-129 Single Base Substitution C-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN624-S.SNP.7:22502805 chr07:022502805 0 W/22502805-22502805 FN624-S Single Base Substitution A-G INTERGENIC HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN872-S.SNP.7:22508182 chr07:022508182 0 W/22508182-22508182 FN872-S Single Base Substitution C-T INTRON HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3799-S.SNP.7:22510362 chr07:022510362 0 W/22510362-22510362 FN3799-S SNP C -> G AC=2;AN=190;BQB=0.877821;DP=2386;DP4=1116,809,18,5;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.4345e-05;MQSB=3.68335e-11;RPB=0.793981;SGB=71.6393;VDB=0.513384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.7:22510362 chr07:022510362 0 W/22510362-22510362 FN3861-S SNP C -> G AC=2;AN=158;BQB=0.829879;DP=2226;DP4=1063,726,8,4;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0;MQB=0.000173118;MQSB=0.00545035;RPB=0.759437;SGB=30.704;VDB=0.258238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.7:22523945 chr07:022523945 0 W/22523945-22523945 FN2260-S SNP A -> C AC=1;AN=190;BQB=0.21092;DP=5052;DP4=2807,1882,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.52529e-06;MQSB=2.39625e-13;RPB=0.789742;SGB=14.9883;VDB=0.638855;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.7:22528133 chr07:022528133 0 W/22528133-22528133 W276-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-336.SNP.7:22529667 chr07:022529667 0 W/22529667-22529667 FN-336 Single Base Substitution A-C INTERGENIC HOMO SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN4229-S.SNP.7:22529811 chr07:022529811 0 W/22529811-22529811 FN4229-S SNP A -> G AC=2;AN=170;BQB=0.97986;DP=2506;DP4=1194,1185,15,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.15384e-15;MQSB=0.696718;RPB=0.892403;SGB=86.5178;VDB=0.4471;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.7:22531424 chr07:022531424 0 W/22531424-22531424 FN1287-S Single Base Substitution T-C INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3437-S.SNP.7:22533367 chr07:022533367 0 W/22533367-22533367 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.560669;DP=3123;DP4=1518,1483,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.59253e-09;MQSB=0.965183;RPB=0.910874;SGB=6.80232;VDB=0.905432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.7:22533396 chr07:022533396 0 W/22533396-22533396 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.189016;DP=3037;DP4=1441,1456,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67176e-06;MQSB=0.999831;RPB=0.632785;SGB=-14.3297;VDB=0.146327;EFF=INTERGENIC(MODIFIER||||||||||1) FN-63.SNP.7:22540400 chr07:022540400 0 W/22540400-22540400 FN-63 Single Base Substitution C-G INTRON HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN-113.SNP.7:22542022 chr07:022542022 0 W/22542022-22542022 FN-113 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN462-S.SNP.7:22544797 chr07:022544797 0 W/22544797-22544797 FN462-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2480.SNP.7:22553091 chr07:022553091 0 W/22553091-22553091 FN2480 SNP C -> T AC=2;AN=200;BQB=0.908586;DP=4943;DP4=2260,2339,15,27;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0206352;MQB=0.942663;MQSB=0.642754;RPB=0.80561;SGB=94.6142;VDB=0.80521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.7:22558272 chr07:022558272 0 W/22558272-22558272 FN2092-S SNP G -> T AC=1;AN=168;BQB=0.129503;DP=3741;DP4=1849,1843,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000267308;MQB=1.96172e-06;MQSB=0.209081;RPB=0.675842;SGB=-38.3665;VDB=0.429565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.7:22563949 chr07:022563949 0 W/22563949-22563949 FN1240-S Single Base Substitution A-G INTRON HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3831-S.SNP.7:22564213 chr07:022564213 0 W/22564213-22564213 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.946271;DP=2757;DP4=1262,1420,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78573e-09;MQSB=0.999817;RPB=0.113383;SGB=67.3108;VDB=0.15784;EFF=UTR_3_PRIME(MODIFIER||157||903|LOC_Os07g37630|protein_coding|CODING|LOC_Os07g37630.1|4|1) FN-199.SNP.7:22565282 chr07:022565282 0 W/22565282-22565282 FN-199 Single Base Substitution A-T INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4105-S.SNP.7:22565339 chr07:022565339 0 W/22565339-22565339 FN4105-S SNP T -> A AC=1;AN=182;BQB=0.95314;DP=2757;DP4=1452,1218,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.39642e-09;MQSB=0.918923;RPB=0.811173;SGB=57.644;VDB=0.0405327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.7:22566338 chr07:022566338 0 W/22566338-22566338 FN1119-S Single Base Substitution T-C INTRON HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN4052-S.SNP.7:22569347 chr07:022569347 0 W/22569347-22569347 FN4052-S SNP G -> T AC=2;AN=168;BQB=0.792701;DP=2573;DP4=1171,1266,17,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.70785e-24;MQSB=0.952198;RPB=0.976573;SGB=75.6627;VDB=0.627078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A903S|1343|LOC_Os07g37640|protein_coding|CODING|LOC_Os07g37640.1|3|1) FN4052-S.SNP.7:22569348 chr07:022569348 0 W/22569348-22569348 FN4052-S SNP C -> T AC=2;AN=168;BQB=0.969305;DP=2585;DP4=1166,1279,17,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.64738e-21;MQSB=0.981601;RPB=0.996308;SGB=145.22;VDB=0.732471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A903V|1343|LOC_Os07g37640|protein_coding|CODING|LOC_Os07g37640.1|3|1) FN3486-S.SNP.7:22571632 chr07:022571632 0 W/22571632-22571632 FN3486-S SNP C -> T AC=1;AN=184;BQB=0.646585;DP=2830;DP4=1615,1129,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01711e-08;MQSB=0.995554;RPB=0.804793;SGB=28.3187;VDB=0.911372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.7:22579352 chr07:022579352 0 W/22579352-22579352 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2286.SNP.7:22584458 chr07:022584458 0 W/22584458-22584458 FN2286 SNP C -> T AC=1;AN=192;BQB=0.0759126;DP=4758;DP4=2187,2264,15,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.41644e-11;MQSB=0.999422;RPB=0.370671;SGB=39.1713;VDB=0.956002;EFF=INTRON(MODIFIER||||1473|LOC_Os07g37670|protein_coding|CODING|LOC_Os07g37670.1|2|1) FN978-S.SNP.7:22588144 chr07:022588144 0 W/22588144-22588144 FN978-S Single Base Substitution G-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-175.SNP.7:22596805 chr07:022596805 0 W/22596805-22596805 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN4111-S.SNP.7:22599846 chr07:022599846 0 W/22599846-22599846 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.995632;DP=3322;DP4=1756,1376,11,7;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00331126;MQB=8.19508e-08;MQSB=0.402068;RPB=0.330028;SGB=30.6767;VDB=0.308786;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.7:22606355 chr07:022606355 0 W/22606355-22606355 FN788-S Single Base Substitution G-A INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN437-S.SNP.7:22621694 chr07:022621694 0 W/22621694-22621694 FN437-S Single Base Substitution T-A INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN3659-S.SNP.7:22632337 chr07:022632337 0 W/22632337-22632337 FN3659-S SNP T -> G AC=1;AN=190;BQB=0.215653;DP=3028;DP4=1593,1293,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38565e-06;MQSB=0.980329;RPB=0.880003;SGB=43.2083;VDB=0.795035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.7:22646587 chr07:022646587 0 W/22646587-22646587 FN1751-S SNP A -> T AC=2;AN=188;BQB=0.0945203;DP=3842;DP4=1728,2043,25,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.36505e-15;MQSB=0.923009;RPB=0.227964;SGB=-395.548;VDB=0.283823;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.7:22649649 chr07:022649649 0 W/22649649-22649649 FN775-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g37760 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN-123.SNP.7:22651745 chr07:022651745 0 W/22651745-22651745 FN-123 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g37760 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1228-S.SNP.7:22657806 chr07:022657806 0 W/22657806-22657806 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1497-S.SNP.7:22672035 chr07:022672035 0 W/22672035-22672035 FN1497-S Single Base Substitution C-T SYNONYMOUS_STOP HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN951-S.SNP.7:22676948 chr07:022676948 0 W/22676948-22676948 FN951-S Single Base Substitution G-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2325.SNP.7:22678148 chr07:022678148 0 W/22678148-22678148 FN2325 SNP G -> A AC=1;AN=192;BQB=0.999693;DP=5070;DP4=2403,2390,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.3623e-13;MQSB=0.58254;RPB=0.833541;SGB=-39.2487;VDB=0.295699;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.7:22679347 chr07:022679347 0 W/22679347-22679347 FN-410 Single Base Substitution G-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2203-S.SNP.7:22684266 chr07:022684266 0 W/22684266-22684266 FN2203-S SNP A -> C AC=1;AN=190;BQB=0.836357;DP=5192;DP4=2320,2508,16,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000192604;MQB=7.26063e-22;MQSB=0.727821;RPB=0.768869;SGB=-1.59056;VDB=0.390955;EFF=INTRON(MODIFIER||||177|LOC_Os07g37820|protein_coding|CODING|LOC_Os07g37820.1|1|1) FN2191-S.SNP.7:22684518 chr07:022684518 0 W/22684518-22684518 FN2191-S SNP G -> A AC=2;AN=190;BQB=0.939399;DP=5015;DP4=2217,2462,25,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.04841e-25;MQSB=0.925865;RPB=0.470298;SGB=52.2813;VDB=0.538446;EFF=INTRON(MODIFIER||||177|LOC_Os07g37820|protein_coding|CODING|LOC_Os07g37820.1|1|1) CW-631-3-1.SNP.7:22685770 chr07:022685770 0 W/22685770-22685770 CW-631-3-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN3705-S.SNP.7:22686846 chr07:022686846 0 W/22686846-22686846 FN3705-S SNP A -> G AC=1;AN=190;BQB=0.205301;DP=1895;DP4=1366,432,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000527704;MQB=0.000138577;MQSB=9.70641e-05;RPB=0.96721;SGB=13.4442;VDB=0.948925;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.7:22687172 chr07:022687172 0 W/22687172-22687172 FN2083-S SNP G -> A AC=2;AN=166;BQB=0.984212;DP=3151;DP4=1572,1518,18,28;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=1.57514e-22;MQSB=0.642236;RPB=0.997881;SGB=-53.7345;VDB=0.854012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.7:22688743 chr07:022688743 0 W/22688743-22688743 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.247484;DP=3988;DP4=1841,1918,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02013e-13;MQSB=0.387496;RPB=0.740544;SGB=103.742;VDB=0.0145152;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.7:22689704 chr07:022689704 0 W/22689704-22689704 FN1721-S SNP G -> T AC=2;AN=188;BQB=0.0604725;DP=3236;DP4=1955,1207,25,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.84292e-15;MQSB=0.802796;RPB=0.678073;SGB=-197.391;VDB=0.538673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K178N|465|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K145N|432|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.2|3|1),SPLICE_SITE_REGION(LOW||||465|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.1|2|1),SPLICE_SITE_REGION(LOW||||432|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.2|3|1) FN998-S.SNP.7:22689871 chr07:022689871 0 W/22689871-22689871 FN998-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g37830 peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN998-S.SNP.7:22689872 chr07:022689872 0 W/22689872-22689872 FN998-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g37830 peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-113.SNP.7:22690996 chr07:022690996 0 W/22690996-22690996 FN-113 Single Base Substitution C-A INTRON HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN2125-S.SNP.7:22693691 chr07:022693691 0 W/22693691-22693691 FN2125-S SNP T -> C AC=1;AN=166;BQB=0.746795;DP=2311;DP4=770,1467,9,6;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=1.00886e-06;MQSB=0.25292;RPB=0.892766;SGB=22.1847;VDB=0.357394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N223S|334|LOC_Os07g37840|protein_coding|CODING|LOC_Os07g37840.1|1|1),UTR_3_PRIME(MODIFIER||575||465|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.1|11|1),UTR_3_PRIME(MODIFIER||575||432|LOC_Os07g37830|protein_coding|CODING|LOC_Os07g37830.2|12|1) FN-104.SNP.7:22693896 chr07:022693896 0 W/22693896-22693896 FN-104 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g37840 lipase, putative, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN373-S.SNP.7:22694727 chr07:022694727 0 W/22694727-22694727 FN373-S Single Base Substitution A-G INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2273-S.SNP.7:22697777 chr07:022697777 0 W/22697777-22697777 FN2273-S SNP A -> G AC=1;AN=190;BQB=0.969079;DP=5392;DP4=2373,2729,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10112e-17;MQSB=0.857657;RPB=0.509917;SGB=61.9679;VDB=0.234799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.7:22700743 chr07:022700743 0 W/22700743-22700743 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.375046;DP=3940;DP4=1842,1798,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14269e-14;MQSB=0.977865;RPB=0.805736;SGB=60.4858;VDB=0.92291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.7:22701684 chr07:022701684 0 W/22701684-22701684 FN-207 Single Base Substitution G-T INTERGENIC HOMO SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN849-S.SNP.7:22704614 chr07:022704614 0 W/22704614-22704614 FN849-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g37860 retrotransposon protein, putative, unclassified, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN900-S.SNP.7:22710155 chr07:022710155 0 W/22710155-22710155 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN-189.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN-189 Single Base Substitution G-A INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1610-S.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN1610-S Single Base Substitution G-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1703-S.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.124036;DP=2188;DP4=1124,1021,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21239e-08;MQSB=0.450605;RPB=0.447927;SGB=-14.9998;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN2124-S SNP G -> A AC=1;AN=166;BQB=0.150694;DP=2776;DP4=1462,1251,14,13;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=9.21726e-12;MQSB=0.956965;RPB=0.987242;SGB=-74.3449;VDB=0.652874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN2187-S SNP G -> A AC=2;AN=190;BQB=0.948405;DP=4699;DP4=2206,2159,28,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.54346e-28;MQSB=0.979064;RPB=0.756609;SGB=174.702;VDB=0.76694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN2360 SNP G -> A AC=1;AN=192;BQB=0.975474;DP=4781;DP4=2278,2252,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.03312e-08;MQSB=0.987837;RPB=0.319818;SGB=-13.64;VDB=0.139868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN3717-S SNP G -> A AC=1;AN=190;BQB=0.949141;DP=3030;DP4=1407,1531,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.61873e-06;MQSB=0.764744;RPB=0.526014;SGB=35.4339;VDB=0.617041;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.7:22710315 chr07:022710315 0 W/22710315-22710315 FN_777-2-1 Single Base Substitution G-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3500-S.SNP.7:22716769 chr07:022716769 0 W/22716769-22716769 FN3500-S SNP A -> T AC=1;AN=188;BQB=0.999993;DP=2995;DP4=1282,1646,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.50146e-06;MQSB=0.83981;RPB=0.298988;SGB=48.979;VDB=0.0964082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.7:22718930 chr07:022718930 0 W/22718930-22718930 FN2456 SNP T -> C AC=1;AN=200;BQB=0.862255;DP=4202;DP4=1706,2179,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.70419e-08;MQSB=0.99439;RPB=0.859622;SGB=40.2696;VDB=0.663114;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.7:22720239 chr07:022720239 0 W/22720239-22720239 FN75-S-43 SNP G -> A AC=1;AN=190;BQB=0.986152;DP=5107;DP4=2473,2208,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37749e-12;MQSB=0.000100351;RPB=0.305316;SGB=75.1932;VDB=0.400717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.7:22722592 chr07:022722592 0 W/22722592-22722592 FN3558-S SNP C -> T AC=1;AN=188;BQB=0.994649;DP=2682;DP4=1235,1329,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.47819e-11;MQSB=0.97209;RPB=0.885551;SGB=31.1628;VDB=0.766256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.7:22722593 chr07:022722593 0 W/22722593-22722593 FN3558-S SNP C -> G AC=1;AN=188;BQB=0.555614;DP=2679;DP4=1210,1331,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.4359e-11;MQSB=0.91839;RPB=0.754211;SGB=10.1681;VDB=0.70943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.7:22724013 chr07:022724013 0 W/22724013-22724013 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.817179;DP=4530;DP4=2073,2114,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000110884;MQSB=0.771532;RPB=0.710151;SGB=44.5415;VDB=0.392155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.7:22725969 chr07:022725969 0 W/22725969-22725969 FN3838-S SNP G -> A AC=2;AN=190;BQB=0.838485;DP=3120;DP4=1375,1601,5,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.82172e-10;MQSB=0.876283;RPB=0.939302;SGB=94.6341;VDB=0.230084;EFF=UTR_3_PRIME(MODIFIER||737||427|LOC_Os07g37890|protein_coding|CODING|LOC_Os07g37890.1|5|1) FN482-S.SNP.7:22732858 chr07:022732858 0 W/22732858-22732858 FN482-S Single Base Substitution A-C INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN574-S.SNP.7:22734372 chr07:022734372 0 W/22734372-22734372 FN574-S Single Base Substitution A-G INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN916-S.SNP.7:22740669 chr07:022740669 0 W/22740669-22740669 FN916-S Single Base Substitution A-T INTRON HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2165-S.SNP.7:22747152 chr07:022747152 0 W/22747152-22747152 FN2165-S SNP G -> A AC=1;AN=168;BQB=0.0133126;DP=3248;DP4=1535,1600,14,14;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0449507;MQB=0.997973;MQSB=0;RPB=0.242643;SGB=-238.038;VDB=0.961213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.7:22748862 chr07:022748862 0 W/22748862-22748862 FN3325-S SNP C -> A AC=1;AN=184;BQB=0.955758;DP=3472;DP4=1536,1798,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.26682e-08;MQSB=0.572384;RPB=0.164514;SGB=71.3514;VDB=0.497999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G76V|218|LOC_Os07g37910|protein_coding|CODING|LOC_Os07g37910.1|2|1) FN2252-S.SNP.7:22749927 chr07:022749927 0 W/22749927-22749927 FN2252-S SNP T -> A AC=1;AN=190;BQB=0.573518;DP=4799;DP4=1912,1987,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=5.11944e-11;MQSB=8.98339e-06;RPB=0.0257033;SGB=-11.0065;VDB=0.153265;EFF=INTRON(MODIFIER||||218|LOC_Os07g37910|protein_coding|CODING|LOC_Os07g37910.1|1|1) FN2555-S.SNP.7:22752940 chr07:022752940 0 W/22752940-22752940 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.989789;DP=4684;DP4=2130,2216,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.48936e-14;MQSB=0.999976;RPB=0.377923;SGB=55.2955;VDB=0.749053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.7:22760335 chr07:022760335 0 W/22760335-22760335 FN2299 SNP C -> T AC=2;AN=192;BQB=0.995798;DP=4704;DP4=2322,2068,29,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.01429e-31;MQSB=0.873505;RPB=0.759446;SGB=126.359;VDB=0.452485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.7:22760714 chr07:022760714 0 W/22760714-22760714 FN3460-S SNP A -> G AC=1;AN=184;BQB=0.191792;DP=2977;DP4=1740,1118,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00756439;MQSB=0.735576;RPB=0.262224;SGB=25.1826;VDB=0.675225;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R16|222|LOC_Os07g37930|protein_coding|CODING|LOC_Os07g37930.1|1|1) FN903-S.SNP.7:22781323 chr07:022781323 0 W/22781323-22781323 FN903-S Single Base Substitution A-G INTRON HOMO SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN2461.SNP.7:22785208 chr07:022785208 0 W/22785208-22785208 FN2461 SNP C -> T AC=1;AN=200;BQB=0.353862;DP=4503;DP4=2023,2121,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4934e-13;MQSB=0.941004;RPB=0.998596;SGB=72.7161;VDB=0.413733;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A14|501|LOC_Os07g37970|protein_coding|CODING|LOC_Os07g37970.1|1|1) FN2456.SNP.7:22788045 chr07:022788045 0 W/22788045-22788045 FN2456 SNP C -> T AC=1;AN=200;BQB=0.438591;DP=4445;DP4=1943,2254,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13818e-08;MQSB=0.722865;RPB=0.795129;SGB=-12.5051;VDB=0.96289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.7:22796151 chr07:022796151 0 W/22796151-22796151 FN3778-S SNP G -> C AC=1;AN=190;BQB=0.838499;DP=2243;DP4=997,1187,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.33142e-05;MQSB=0.97105;RPB=0.147127;SGB=44.5415;VDB=0.851111;EFF=INTRON(MODIFIER||||615|LOC_Os07g37990|protein_coding|CODING|LOC_Os07g37990.1|1|1) FN2140-S.SNP.7:22796251 chr07:022796251 0 W/22796251-22796251 FN2140-S SNP T -> G AC=1;AN=168;BQB=0.0918458;DP=3993;DP4=2022,1934,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13452e-10;MQSB=0.940753;RPB=0.813307;SGB=34.3388;VDB=0.0253578;EFF=INTRON(MODIFIER||||615|LOC_Os07g37990|protein_coding|CODING|LOC_Os07g37990.1|1|1) FN1448-S.SNP.7:22798952 chr07:022798952 0 W/22798952-22798952 FN1448-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1163-S.SNP.7:22800297 chr07:022800297 0 W/22800297-22800297 FN1163-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1679-S.SNP.7:22804080 chr07:022804080 0 W/22804080-22804080 FN1679-S SNP T -> A AC=1;AN=188;BQB=0.966954;DP=3652;DP4=1837,1785,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7276e-14;MQSB=0.999734;RPB=0.425698;SGB=74.9605;VDB=0.138766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.7:22807200 chr07:022807200 0 W/22807200-22807200 FN2462 SNP A -> T AC=1;AN=200;BQB=0.373961;DP=3966;DP4=1863,1771,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.08085e-12;MQSB=0.836195;RPB=0.992275;SGB=39.9056;VDB=0.287297;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.7:22811120 chr07:022811120 0 W/22811120-22811120 FN3681-S SNP A -> G AC=1;AN=190;BQB=0.999695;DP=3061;DP4=1268,1392,14,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.8094e-15;MQSB=1;RPB=0.181379;SGB=30.527;VDB=0.0286647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.7:22811745 chr07:022811745 0 W/22811745-22811745 FN3280-S SNP G -> A AC=2;AN=184;BQB=0.995184;DP=2924;DP4=1413,1392,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.57686e-14;MQSB=0.988703;RPB=0.957847;SGB=116.569;VDB=0.762781;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.7:22812542 chr07:022812542 0 W/22812542-22812542 FN3780-S SNP A -> T AC=1;AN=190;BQB=0.934584;DP=2920;DP4=1550,1222,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00136986;MQB=0.000102544;MQSB=4.31721e-13;RPB=0.999982;SGB=67.3108;VDB=0.943054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.7:22819039 chr07:022819039 0 W/22819039-22819039 FN3637-S SNP G -> A AC=2;AN=190;BQB=0.688698;DP=2946;DP4=1527,1308,13,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.02651e-07;MQSB=0.995342;RPB=0.860785;SGB=71.8647;VDB=0.694485;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G512|773|LOC_Os07g38060|protein_coding|CODING|LOC_Os07g38060.1|4|1) FN792-S.SNP.7:22824908 chr07:022824908 0 W/22824908-22824908 FN792-S Single Base Substitution A-G INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN3319-S.SNP.7:22826440 chr07:022826440 0 W/22826440-22826440 FN3319-S SNP G -> A AC=1;AN=184;BQB=0.723799;DP=3281;DP4=1379,1735,3,12;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=1.58235e-05;MQSB=0.0661225;RPB=0.0906771;SGB=62.3078;VDB=0.364549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.7:22831816 chr07:022831816 0 W/22831816-22831816 FN3570-S SNP T -> C AC=1;AN=190;BQB=0.918323;DP=3160;DP4=1539,1525,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85844e-08;MQSB=0.899039;RPB=0.990204;SGB=53.6492;VDB=0.711694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:22833173 chr07:022833173 0 W/22833173-22833173 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.906018;DP=5092;DP4=2592,2087,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25787e-16;MQSB=0.877022;RPB=0.978047;SGB=27.1468;VDB=0.357722;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D739|977|LOC_Os07g38080|protein_coding|CODING|LOC_Os07g38080.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D739|977|LOC_Os07g38080|protein_coding|CODING|LOC_Os07g38080.2|4|1) FN1028-S.SNP.7:22849540 chr07:022849540 0 W/22849540-22849540 FN1028-S Single Base Substitution G-T INTRON HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1065-S.SNP.7:22850034 chr07:022850034 0 W/22850034-22850034 FN1065-S Single Base Substitution C-T INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN792-S.SNP.7:22858617 chr07:022858617 0 W/22858617-22858617 FN792-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN1388-S.SNP.7:22867787 chr07:022867787 0 W/22867787-22867787 FN1388-S Single Base Substitution G-A INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2157-S.SNP.7:22885158 chr07:022885158 0 W/22885158-22885158 FN2157-S SNP T -> G AC=1;AN=168;BQB=0.0106651;DP=3947;DP4=1918,1981,23,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.67193e-08;MQSB=0.0149439;RPB=0.823718;SGB=-9.34108;VDB=0.338501;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgG|R501|1099|LOC_Os07g38160|protein_coding|CODING|LOC_Os07g38160.1|3|1) FN-30.SNP.7:22887466 chr07:022887466 0 W/22887466-22887466 FN-30 Single Base Substitution C-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3811-S.SNP.7:22889957 chr07:022889957 0 W/22889957-22889957 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.334572;DP=3004;DP4=1374,1499,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.14006e-07;MQSB=9.66885e-09;RPB=0.93721;SGB=43.2083;VDB=0.414899;EFF=INTRON(MODIFIER||||316|LOC_Os07g38170|protein_coding|CODING|LOC_Os07g38170.1|1|1) FN3811-S.SNP.7:22889958 chr07:022889958 0 W/22889958-22889958 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.526906;DP=3023;DP4=1379,1509,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.83212e-06;MQSB=2.74626e-09;RPB=0.647471;SGB=53.6492;VDB=0.326671;EFF=INTRON(MODIFIER||||316|LOC_Os07g38170|protein_coding|CODING|LOC_Os07g38170.1|1|1) FN1633-S.SNP.7:22890902 chr07:022890902 0 W/22890902-22890902 FN1633-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN447-S.SNP.7:22932545 chr07:022932545 0 W/22932545-22932545 FN447-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN3851-S.SNP.7:22935583 chr07:022935583 0 W/22935583-22935583 FN3851-S SNP C -> A AC=1;AN=158;BQB=0.996618;DP=2521;DP4=1155,1256,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.82954e-07;MQSB=0.998804;RPB=0.546631;SGB=47.0672;VDB=0.922126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.7:22944756 chr07:022944756 0 W/22944756-22944756 FN3705-S SNP G -> A AC=1;AN=190;BQB=0.657346;DP=2964;DP4=1306,1561,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0;MQB=0.751739;MQSB=0.000582556;RPB=0.853676;SGB=39.9877;VDB=0.156654;EFF=INTRON(MODIFIER||||998|LOC_Os07g38260|protein_coding|CODING|LOC_Os07g38260.1|14|1) FN3665-S.SNP.7:22954333 chr07:022954333 0 W/22954333-22954333 FN3665-S SNP A -> T AC=1;AN=190;BQB=0.988457;DP=2600;DP4=1043,1382,12,18;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=3.54696e-11;MQSB=1.34525e-12;RPB=0.466593;SGB=131.065;VDB=0.641926;EFF=INTRON(MODIFIER||||998|LOC_Os07g38260|protein_coding|CODING|LOC_Os07g38260.1|2|1) FN4167-S.SNP.7:22958580 chr07:022958580 0 W/22958580-22958580 FN4167-S SNP C -> T AC=1;AN=170;BQB=0.877517;DP=2276;DP4=1139,1052,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16503e-06;MQSB=0.508716;RPB=0.907489;SGB=38.987;VDB=0.594064;EFF=INTRON(MODIFIER||||988|LOC_Os07g38270|protein_coding|CODING|LOC_Os07g38270.1|19|1) FN4167-S.SNP.7:22958581 chr07:022958581 0 W/22958581-22958581 FN4167-S SNP C -> T AC=1;AN=170;BQB=0.953076;DP=2279;DP4=1157,1054,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.06523e-08;MQSB=0.553611;RPB=0.952273;SGB=47.8722;VDB=0.722689;EFF=INTRON(MODIFIER||||988|LOC_Os07g38270|protein_coding|CODING|LOC_Os07g38270.1|19|1) FN2235-S.SNP.7:22962135 chr07:022962135 0 W/22962135-22962135 FN2235-S SNP T -> G AC=2;AN=190;BQB=0.876855;DP=4904;DP4=2386,2006,27,26;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=3.40192e-23;MQSB=0.981818;RPB=0.39658;SGB=63.1584;VDB=0.0655762;EFF=INTRON(MODIFIER||||988|LOC_Os07g38270|protein_coding|CODING|LOC_Os07g38270.1|14|1) FN4247-S.SNP.7:22969271 chr07:022969271 0 W/22969271-22969271 FN4247-S SNP A -> G AC=1;AN=170;BQB=0.991831;DP=2440;DP4=1094,1254,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.92505e-06;MQSB=0.999812;RPB=0.18533;SGB=21.1076;VDB=0.468633;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L157|988|LOC_Os07g38270|protein_coding|CODING|LOC_Os07g38270.1|5|1) FN438-S.SNP.7:22970618 chr07:022970618 0 W/22970618-22970618 FN438-S Single Base Substitution A-G INTRON HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN873-S.SNP.7:22971676 chr07:022971676 0 W/22971676-22971676 FN873-S Single Base Substitution A-T INTRON HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN4247-S.SNP.7:22973473 chr07:022973473 0 W/22973473-22973473 FN4247-S SNP A -> G AC=1;AN=170;BQB=0.986025;DP=2273;DP4=1283,911,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0;MQB=0.000228356;MQSB=0.04136;RPB=0.46854;SGB=34.5445;VDB=0.136639;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.7:22978637 chr07:022978637 0 W/22978637-22978637 FN3951-S SNP A -> C AC=2;AN=168;BQB=0.329598;DP=2558;DP4=1156,1285,11,13;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0;MQB=8.38627e-07;MQSB=0.00986018;RPB=0.277725;SGB=100.912;VDB=0.339822;EFF=INTRON(MODIFIER||||1045|LOC_Os07g38280|protein_coding|CODING|LOC_Os07g38280.1|18|1),INTRON(MODIFIER||||1016|LOC_Os07g38280|protein_coding|CODING|LOC_Os07g38280.2|17|1) FN1113-S.SNP.7:22984363 chr07:022984363 0 W/22984363-22984363 FN1113-S Single Base Substitution C-G INTRON HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3387-S.SNP.7:22988869 chr07:022988869 0 W/22988869-22988869 FN3387-S SNP T -> A AC=1;AN=184;BQB=0.772482;DP=2670;DP4=1291,1280,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000153232;MQSB=0.853495;RPB=0.729012;SGB=25.1826;VDB=0.00972359;EFF=INTRON(MODIFIER||||1045|LOC_Os07g38280|protein_coding|CODING|LOC_Os07g38280.1|3|1),INTRON(MODIFIER||||1016|LOC_Os07g38280|protein_coding|CODING|LOC_Os07g38280.2|3|1) FN2217-S.SNP.7:22995699 chr07:022995699 0 W/22995699-22995699 FN2217-S SNP G -> T AC=1;AN=190;BQB=0.81552;DP=4603;DP4=1907,2392,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.65295e-05;MQSB=0.0599797;RPB=0.597031;SGB=10.8904;VDB=0.439806;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.7:22999709 chr07:022999709 0 W/22999709-22999709 FN-283 Single Base Substitution T-A INTRON HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3523-S.SNP.7:23008455 chr07:023008455 0 W/23008455-23008455 FN3523-S SNP T -> A AC=1;AN=188;BQB=0.97908;DP=2680;DP4=1339,1284,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.4222e-06;MQSB=0.52677;RPB=0.972548;SGB=21.8113;VDB=0.716163;EFF=UTR_3_PRIME(MODIFIER||744||234|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.2|11|1),UTR_3_PRIME(MODIFIER||744||141|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.5|11|1),UTR_3_PRIME(MODIFIER||337||266|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.1|11|1) FN3523-S.SNP.7:23008456 chr07:023008456 0 W/23008456-23008456 FN3523-S SNP C -> A AC=1;AN=188;BQB=0.998563;DP=2676;DP4=1346,1299,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09422e-05;MQSB=0.545886;RPB=0.981593;SGB=30.8063;VDB=0.841906;EFF=UTR_3_PRIME(MODIFIER||745||234|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.2|11|1),UTR_3_PRIME(MODIFIER||745||141|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.5|11|1),UTR_3_PRIME(MODIFIER||338||266|LOC_Os07g38300|protein_coding|CODING|LOC_Os07g38300.1|11|1) FN2477.SNP.7:23012483 chr07:023012483 0 W/23012483-23012483 FN2477 SNP G -> A AC=2;AN=200;BQB=0.999851;DP=4777;DP4=2267,2153,18,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.55134e-23;MQSB=0.978473;RPB=0.912378;SGB=197.025;VDB=0.732559;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.7:23019002 chr07:023019002 0 W/23019002-23019002 FN1764-S SNP G -> A AC=1;AN=188;BQB=0.999499;DP=3303;DP4=1703,1542,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0826521;MQB=0.00815983;MQSB=1.98554e-10;RPB=0.49936;SGB=-61.9025;VDB=0.305484;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.7:23019879 chr07:023019879 0 W/23019879-23019879 FN2696-S SNP G -> C AC=1;AN=200;BQB=0.933017;DP=4522;DP4=2056,2219,10,8;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0926581;MQB=0.034741;MQSB=0.000647098;RPB=0.383198;SGB=54.6902;VDB=0.524259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G85R|1469|LOC_Os07g38320|protein_coding|CODING|LOC_Os07g38320.1|1|1) FN1668-S.SNP.7:23020871 chr07:023020871 0 W/23020871-23020871 FN1668-S SNP G -> T AC=1;AN=188;BQB=0.999174;DP=2413;DP4=1329,1063,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.0613344;MQB=0.921165;MQSB=1.65893e-11;RPB=0.703144;SGB=15.903;VDB=0.369891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L415F|1469|LOC_Os07g38320|protein_coding|CODING|LOC_Os07g38320.1|1|1) FN3506-S.SNP.7:23024283 chr07:023024283 0 W/23024283-23024283 FN3506-S SNP T -> A AC=1;AN=188;BQB=0.96397;DP=3440;DP4=825,2429,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.0909884;MQB=0.698828;MQSB=1.95341e-42;RPB=0.0251594;SGB=43.0708;VDB=0.437371;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.7:23045924 chr07:023045924 0 W/23045924-23045924 FN4203-S SNP G -> A AC=1;AN=170;BQB=0.819105;DP=2537;DP4=1189,1243,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0;MQB=3.30691e-08;MQSB=0.00489384;RPB=0.619651;SGB=52.0913;VDB=0.22399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.7:23047703 chr07:023047703 0 W/23047703-23047703 FN3435-S SNP T -> C AC=1;AN=184;BQB=0.984213;DP=3599;DP4=1185,2178,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34363e-09;MQSB=0.775986;RPB=0.477996;SGB=28.3187;VDB=0.0873465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.7:23056696 chr07:023056696 0 W/23056696-23056696 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.0409559;DP=3650;DP4=1542,1683,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.5449e-07;MQSB=0.961724;RPB=0.350365;SGB=-15.026;VDB=0.755736;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.7:23060607 chr07:023060607 0 W/23060607-23060607 FN-93 Single Base Substitution C-T INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1716-S.SNP.7:23086665 chr07:023086665 0 W/23086665-23086665 FN1716-S SNP T -> C AC=1;AN=188;BQB=0.182383;DP=2256;DP4=922,1263,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000196055;MQSB=0.944091;RPB=0.999944;SGB=-170.968;VDB=0.0882717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V27A|169|LOC_Os07g38410|protein_coding|CODING|LOC_Os07g38410.1|1|1) FN-289.SNP.7:23092363 chr07:023092363 0 W/23092363-23092363 FN-289 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g38430 WD domain, G-beta repeat domain containing protein, expressed SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3595-S.SNP.7:23097422 chr07:023097422 0 W/23097422-23097422 FN3595-S SNP A -> G AC=2;AN=190;BQB=0.998811;DP=2270;DP4=1230,959,10,10;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.57829e-07;MQSB=0.950073;RPB=0.415081;SGB=85.5263;VDB=0.968375;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.7:23100994 chr07:023100994 0 W/23100994-23100994 FN1272-S Single Base Substitution G-A INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN4174-S.SNP.7:23113572 chr07:023113572 0 W/23113572-23113572 FN4174-S SNP C -> A AC=1;AN=170;BQB=0.991579;DP=2889;DP4=1251,1562,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.33701e-07;MQSB=0.935933;RPB=0.56938;SGB=27.9928;VDB=0.196277;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L203M|286|LOC_Os07g38480|protein_coding|CODING|LOC_Os07g38480.1|2|1) FN2112-S.SNP.7:23114477 chr07:023114477 0 W/23114477-23114477 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.572323;DP=3344;DP4=1302,2001,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.38643e-07;MQSB=0.946115;RPB=0.114314;SGB=11.3448;VDB=0.314621;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.7:23116902 chr07:023116902 0 W/23116902-23116902 FN-273 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g38490 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN4022-S.SNP.7:23123553 chr07:023123553 0 W/23123553-23123553 FN4022-S SNP T -> A AC=1;AN=168;BQB=0.999462;DP=2829;DP4=1323,1362,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0;MQB=0.000365407;MQSB=0.986517;RPB=0.765832;SGB=27.8864;VDB=0.836722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.7:23123904 chr07:023123904 0 W/23123904-23123904 FN3596-S SNP G -> A AC=1;AN=188;BQB=0.590097;DP=3173;DP4=1904,1167,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0;MQB=0.0145687;MQSB=0.0241545;RPB=0.999722;SGB=53.5223;VDB=0.76218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.7:23128165 chr07:023128165 0 W/23128165-23128165 FN3449-S SNP A -> T AC=1;AN=184;BQB=0.887497;DP=3577;DP4=2179,1290,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=8.32662e-06;MQSB=3.41936e-11;RPB=0.934146;SGB=71.3514;VDB=0.919155;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.7:23128665 chr07:023128665 0 W/23128665-23128665 FN-202 Single Base Substitution C-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3733-S.SNP.7:23136661 chr07:023136661 0 W/23136661-23136661 FN3733-S SNP C -> T AC=1;AN=190;BQB=0.997368;DP=1841;DP4=943,847,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00814775;MQB=0.225953;MQSB=0;RPB=0.976882;SGB=39.9877;VDB=0.887186;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1188*|1931|LOC_Os07g38500|protein_coding|CODING|LOC_Os07g38500.1|3|1);LOF=(LOC_Os07g38500|LOC_Os07g38500|1|1.00);NMD=(LOC_Os07g38500|LOC_Os07g38500|1|1.00) FN2237-S.SNP.7:23137334 chr07:023137334 0 W/23137334-23137334 FN2237-S SNP G -> A AC=1;AN=190;BQB=0.0126656;DP=3591;DP4=1725,1618,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0620997;MQB=0.362833;MQSB=5.44714e-11;RPB=0.723045;SGB=78.7471;VDB=0.0927105;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G1412E|1931|LOC_Os07g38500|protein_coding|CODING|LOC_Os07g38500.1|3|1) FN2530-S.SNP.7:23145189 chr07:023145189 0 W/23145189-23145189 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.994872;DP=4119;DP4=1931,1832,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.69559e-08;MQSB=0.499536;RPB=0.993716;SGB=-12.0504;VDB=0.438189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.7:23145190 chr07:023145190 0 W/23145190-23145190 FN2530-S SNP G -> T AC=1;AN=198;BQB=0.989365;DP=4106;DP4=1984,1842,4,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.67153e-10;MQSB=0.507599;RPB=0.998471;SGB=50.9344;VDB=0.297823;EFF=INTERGENIC(MODIFIER||||||||||1) FN3801-S.SNP.7:23147695 chr07:023147695 0 W/23147695-23147695 FN3801-S SNP T -> A AC=2;AN=190;BQB=0.49971;DP=2644;DP4=1310,1211,7,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.99553e-06;MQSB=0.0157745;RPB=0.960989;SGB=71.8647;VDB=0.858225;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y313*|704|LOC_Os07g38530|protein_coding|CODING|LOC_Os07g38530.1|6|1),STOP_GAINED(HIGH|NONSENSE|taT/taA|Y313*|654|LOC_Os07g38530|protein_coding|CODING|LOC_Os07g38530.2|6|1);LOF=(LOC_Os07g38530|LOC_Os07g38530|2|1.00);NMD=(LOC_Os07g38530|LOC_Os07g38530|2|1.00) FN3966-S.SNP.7:23148259 chr07:023148259 0 W/23148259-23148259 FN3966-S SNP A -> G AC=1;AN=168;BQB=0.908509;DP=2533;DP4=1224,1196,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.58324e-07;MQSB=0.999415;RPB=0.805654;SGB=12.4615;VDB=0.442189;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S467|654|LOC_Os07g38530|protein_coding|CODING|LOC_Os07g38530.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S467|704|LOC_Os07g38530|protein_coding|CODING|LOC_Os07g38530.1|7|1) FN1526-S.SNP.7:23153066 chr07:023153066 0 W/23153066-23153066 FN1526-S Single Base Substitution C-T INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN_846-8-1.SNP.7:23159244 chr07:023159244 0 W/23159244-23159244 FN_846-8-1 Single Base Substitution A-G Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2278-S.SNP.7:23159401 chr07:023159401 0 W/23159401-23159401 FN2278-S SNP G -> A AC=2;AN=190;BQB=0.402494;DP=2784;DP4=2002,477,33,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.9353e-21;MQSB=0.761099;RPB=0.222738;SGB=180.22;VDB=0.879573;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.7:23199474 chr07:023199474 0 W/23199474-23199474 FN850-S Single Base Substitution T-C INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN-335.SNP.7:23199582 chr07:023199582 0 W/23199582-23199582 FN-335 Single Base Substitution G-C INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN428-S.SNP.7:23211636 chr07:023211636 0 W/23211636-23211636 FN428-S Single Base Substitution C-A INTERGENIC HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2455.SNP.7:23214491 chr07:023214491 0 W/23214491-23214491 FN2455 SNP A -> G AC=2;AN=200;BQB=0.864402;DP=4295;DP4=2020,2042,18,19;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.000232829;MQB=6.57021e-11;MQSB=0.517824;RPB=0.435747;SGB=164.789;VDB=0.112177;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.7:23216047 chr07:023216047 0 W/23216047-23216047 FN2789-S SNP G -> T AC=2;AN=198;BQB=0.750792;DP=4079;DP4=1751,2103,21,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.68937e-23;MQSB=0.0901893;RPB=0.626299;SGB=137.217;VDB=0.926033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.7:23216607 chr07:023216607 0 W/23216607-23216607 FN3543-S SNP G -> A AC=2;AN=188;BQB=0.830448;DP=2624;DP4=1062,1474,8,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=3.52757e-08;MQSB=0.0565731;RPB=0.32759;SGB=26.0762;VDB=0.990752;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.7:23225113 chr07:023225113 0 W/23225113-23225113 FN708-S Single Base Substitution G-A INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3848-S.SNP.7:23230419 chr07:023230419 0 W/23230419-23230419 FN3848-S SNP C -> A AC=2;AN=158;BQB=0.832535;DP=2784;DP4=1265,1334,6,22;HOB=0.024996;ICB=0.493752;MQ=43;MQ0F=0.00179598;MQB=2.10246e-11;MQSB=0.998368;RPB=0.742009;SGB=116.978;VDB=0.121294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.7:23240295 chr07:023240295 0 W/23240295-23240295 FN2500 SNP C -> T AC=1;AN=200;BQB=0.993589;DP=4920;DP4=2293,2055,11,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.22603e-09;MQSB=0.0784546;RPB=0.960553;SGB=39.9056;VDB=0.11092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.7:23263442 chr07:023263442 0 W/23263442-23263442 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.566469;DP=4576;DP4=2315,2057,19,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.3016e-22;MQSB=0.996269;RPB=0.728599;SGB=159.832;VDB=0.479035;EFF=INTRON(MODIFIER||||1123|LOC_Os07g38760|protein_coding|CODING|LOC_Os07g38760.1|2|1) FN2579-S.SNP.7:23265978 chr07:023265978 0 W/23265978-23265978 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.568184;DP=4038;DP4=2067,1697,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.25002e-06;MQSB=0.0201044;RPB=0.323809;SGB=44.9538;VDB=0.0258627;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.7:23270091 chr07:023270091 0 W/23270091-23270091 FN-180 Single Base Substitution C-T INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN2165-S.SNP.7:23270277 chr07:023270277 0 W/23270277-23270277 FN2165-S SNP C -> G AC=1;AN=168;BQB=0.0251193;DP=4194;DP4=2072,2087,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0166905;MQB=1.84546e-05;MQSB=0.0210872;RPB=0.839628;SGB=-42.92;VDB=0.851538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttC|L351F|361|LOC_Os07g38780|protein_coding|CODING|LOC_Os07g38780.1|2|1) FN3763-S.SNP.7:23271455 chr07:023271455 0 W/23271455-23271455 FN3763-S SNP G -> A AC=1;AN=190;BQB=0.969692;DP=2494;DP4=1307,1119,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0585405;MQB=0.752479;MQSB=0;RPB=0.862897;SGB=49.0954;VDB=0.495162;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N27|361|LOC_Os07g38780|protein_coding|CODING|LOC_Os07g38780.1|1|1) FN1026-S.SNP.7:23272887 chr07:023272887 0 W/23272887-23272887 FN1026-S Single Base Substitution T-C INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN321-S.SNP.7:23275543 chr07:023275543 0 W/23275543-23275543 FN321-S Single Base Substitution C-A INTRON HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3395-S.SNP.7:23275591 chr07:023275591 0 W/23275591-23275591 FN3395-S SNP A -> T AC=1;AN=184;BQB=0.835143;DP=4204;DP4=1895,2037,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.2263e-12;MQSB=0.992617;RPB=0.27433;SGB=15.9331;VDB=0.688068;EFF=INTRON(MODIFIER||||593|LOC_Os07g38790|protein_coding|CODING|LOC_Os07g38790.1|1|1) W443-5-1-3.SNP.7:23278270 chr07:023278270 0 W/23278270-23278270 W443-5-1-3 Single Base Substitution A-T INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN282-S.SNP.7:23287185 chr07:023287185 0 W/23287185-23287185 FN282-S Single Base Substitution A-T INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2260-S.SNP.7:23287578 chr07:023287578 0 W/23287578-23287578 FN2260-S SNP C -> T AC=2;AN=190;BQB=0.391492;DP=5129;DP4=2181,2521,38,57;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00019497;MQB=1.91978e-43;MQSB=0.0737666;RPB=0.708512;SGB=265.391;VDB=0.543832;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-3-1.SNP.7:23288564 chr07:023288564 0 W/23288564-23288564 FN_789-3-1 Single Base Substitution G-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN3312-S.SNP.7:23299117 chr07:023299117 0 W/23299117-23299117 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.938126;DP=3111;DP4=1569,1446,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44715e-11;MQSB=0.999117;RPB=0.717675;SGB=11.3677;VDB=0.927957;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S4|550|LOC_Os07g38840|protein_coding|CODING|LOC_Os07g38840.1|1|1),UTR_5_PRIME(MODIFIER||970||522|LOC_Os07g38840|protein_coding|CODING|LOC_Os07g38840.2|1|1) FN-411.SNP.7:23299744 chr07:023299744 0 W/23299744-23299744 FN-411 Single Base Substitution A-G INTRON HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1521-S.SNP.7:23314818 chr07:023314818 0 W/23314818-23314818 FN1521-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g38860 OsGH3.10 - Probable indole-3-acetic acid-amido synthetase, expressed SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1521-S.SNP.7:23314844 chr07:023314844 0 W/23314844-23314844 FN1521-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3752-S.SNP.7:23319474 chr07:023319474 0 W/23319474-23319474 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.999024;DP=2354;DP4=891,1320,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33111e-06;MQSB=0.875103;RPB=0.919499;SGB=-0.550503;VDB=0.913441;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.7:23324725 chr07:023324725 0 W/23324725-23324725 FN830-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g38880 expressed protein SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN721-S.SNP.7:23330638 chr07:023330638 0 W/23330638-23330638 FN721-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g38910 histidine kinase, putative, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN880-S.SNP.7:23344333 chr07:023344333 0 W/23344333-23344333 FN880-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1118-S.SNP.7:23356973 chr07:023356973 0 W/23356973-23356973 FN1118-S Single Base Substitution C-G INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN509-S.SNP.7:23366294 chr07:023366294 0 W/23366294-23366294 FN509-S Single Base Substitution G-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3892-S.SNP.7:23367601 chr07:023367601 0 W/23367601-23367601 FN3892-S SNP T -> A AC=1;AN=158;BQB=0.819355;DP=2369;DP4=1062,1223,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.68353e-08;MQSB=0.97958;RPB=0.892383;SGB=30.704;VDB=0.753381;EFF=INTRON(MODIFIER||||366|LOC_Os07g38980|protein_coding|CODING|LOC_Os07g38980.1|2|1) FN-338.SNP.7:23378915 chr07:023378915 0 W/23378915-23378915 FN-338 Single Base Substitution G-T INTRON HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-79.SNP.7:23382455 chr07:023382455 0 W/23382455-23382455 FN-79 Single Base Substitution T-G INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1022-S.SNP.7:23382720 chr07:023382720 0 W/23382720-23382720 FN1022-S Single Base Substitution G-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1512-S.SNP.7:23382986 chr07:023382986 0 W/23382986-23382986 FN1512-S Single Base Substitution A-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3658-S.SNP.7:23384157 chr07:023384157 0 W/23384157-23384157 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.962755;DP=2857;DP4=1360,1422,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80159e-06;MQSB=0.833615;RPB=0.297562;SGB=21.8853;VDB=0.707824;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.7:23384307 chr07:023384307 0 W/23384307-23384307 FN4314-S SNP A -> G AC=1;AN=170;BQB=0.84484;DP=2390;DP4=1146,1175,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.91243e-07;MQSB=0.825012;RPB=0.99998;SGB=56.7575;VDB=0.641167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.7:23386323 chr07:023386323 0 W/23386323-23386323 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.837875;DP=3542;DP4=1465,1909,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000282326;MQB=1.26171e-07;MQSB=0.907807;RPB=0.463746;SGB=3.75875;VDB=0.46574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.7:23386867 chr07:023386867 0 W/23386867-23386867 FN1505-S Single Base Substitution A-G INTERGENIC Homo SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN-333.SNP.7:23395834 chr07:023395834 0 W/23395834-23395834 FN-333 Single Base Substitution A-T INTRON HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1153-S.SNP.7:23398386 chr07:023398386 0 W/23398386-23398386 FN1153-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g39020 OsSub53 - Putative Subtilisin homologue, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN-132.SNP.7:23402026 chr07:023402026 0 W/23402026-23402026 FN-132 Single Base Substitution G-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2210-S.SNP.7:23406224 chr07:023406224 0 W/23406224-23406224 FN2210-S SNP A -> T AC=1;AN=190;BQB=0.942237;DP=5139;DP4=2464,2431,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00019459;MQB=2.26933e-09;MQSB=0.553109;RPB=0.938995;SGB=50.3161;VDB=0.518803;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.7:23417803 chr07:023417803 0 W/23417803-23417803 FN999-S Single Base Substitution A-G INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-39.SNP.7:23418422 chr07:023418422 0 W/23418422-23418422 FN-39 Single Base Substitution T-A INTERGENIC Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN-315.SNP.7:23427933 chr07:023427933 0 W/23427933-23427933 FN-315 Single Base Substitution G-A INTRON HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1448-S.SNP.7:23436823 chr07:023436823 0 W/23436823-23436823 FN1448-S Single Base Substitution C-T INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN624-S.SNP.7:23436823 chr07:023436823 0 W/23436823-23436823 FN624-S Single Base Substitution C-T INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN3446-S.SNP.7:23440827 chr07:023440827 0 W/23440827-23440827 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.939039;DP=2204;DP4=933,1162,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.6883e-05;MQSB=0.861462;RPB=0.963342;SGB=30.6558;VDB=0.00542375;EFF=INTRON(MODIFIER||||180|LOC_Os07g39120|protein_coding|CODING|LOC_Os07g39120.1|2|1) FN2290.SNP.7:23443834 chr07:023443834 0 W/23443834-23443834 FN2290 SNP T -> A AC=1;AN=192;BQB=0.998938;DP=5371;DP4=2463,2576,13,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.19011e-19;MQSB=0.751562;RPB=0.979359;SGB=82.7652;VDB=0.855823;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.7:23443847 chr07:023443847 0 W/23443847-23443847 FN-366 Single Base Substitution G-A INTERGENIC HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3760-S.SNP.7:23461013 chr07:023461013 0 W/23461013-23461013 FN3760-S SNP G -> A AC=1;AN=190;BQB=0.823983;DP=2417;DP4=1327,982,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.000413736;MQB=0.646568;MQSB=0.946177;RPB=0.999637;SGB=21.8853;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.7:23462469 chr07:023462469 0 W/23462469-23462469 FN1142-S Single Base Substitution G-A INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2285.SNP.7:23468904 chr07:023468904 0 W/23468904-23468904 FN2285 SNP G -> C AC=1;AN=192;BQB=0.690354;DP=6126;DP4=3413,2169,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0909239;MQB=0.630798;MQSB=3.73903e-22;RPB=0.649208;SGB=33.9487;VDB=0.670997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3694-S.SNP.7:23476665 chr07:023476665 0 W/23476665-23476665 FN3694-S SNP C -> T AC=1;AN=190;BQB=0.996125;DP=2748;DP4=1466,1108,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=7.4017e-06;MQSB=0.0126532;RPB=0.953145;SGB=39.9877;VDB=0.980088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.7:23482033 chr07:023482033 0 W/23482033-23482033 FN1707-S SNP T -> A AC=1;AN=188;BQB=0.326231;DP=3787;DP4=1786,1965,10,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.16913e-05;MQSB=0.997961;RPB=0.702206;SGB=35.9843;VDB=0.0668535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.7:23483863 chr07:023483863 0 W/23483863-23483863 FN1209-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2196-S.SNP.7:23487335 chr07:023487335 0 W/23487335-23487335 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.654158;DP=4773;DP4=2368,2141,11,17;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.211397;MQB=0.581723;MQSB=0;RPB=0.94434;SGB=24.3115;VDB=0.734175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S393F|1313|LOC_Os07g39230|protein_coding|CODING|LOC_Os07g39230.1|1|1) FN3301-S.SNP.7:23489980 chr07:023489980 0 W/23489980-23489980 FN3301-S SNP G -> T AC=1;AN=184;BQB=0.319895;DP=2860;DP4=1460,1276,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.233217;MQB=0.216961;MQSB=0.00206272;RPB=0.681653;SGB=35.7479;VDB=0.968659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G1147V|1313|LOC_Os07g39230|protein_coding|CODING|LOC_Os07g39230.1|2|1) FN2771-S.SNP.7:23490347 chr07:023490347 0 W/23490347-23490347 FN2771-S SNP G -> A AC=2;AN=198;BQB=0.941827;DP=3807;DP4=1796,1746,12,13;HOB=0.019998;ICB=0.495001;MQ=28;MQ0F=0.156291;MQB=0.22737;MQSB=5.23124e-18;RPB=0.51885;SGB=50.1053;VDB=0.659598;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E1269|1313|LOC_Os07g39230|protein_coding|CODING|LOC_Os07g39230.1|2|1) FN2725-S.SNP.7:23496658 chr07:023496658 0 W/23496658-23496658 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.784742;DP=5062;DP4=2493,2347,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00019755;MQB=2.77044e-05;MQSB=0.30627;RPB=0.770174;SGB=-0.141083;VDB=0.936239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.7:23501897 chr07:023501897 0 W/23501897-23501897 FN1065-S Single Base Substitution A-G INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3401-S.SNP.7:23504029 chr07:023504029 0 W/23504029-23504029 FN3401-S SNP C -> G AC=1;AN=184;BQB=0.891055;DP=3822;DP4=2129,1575,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31322e-08;MQSB=0.983873;RPB=0.976195;SGB=39.2697;VDB=0.67567;EFF=UTR_5_PRIME(MODIFIER||246||146|LOC_Os07g39260|protein_coding|CODING|LOC_Os07g39260.1|1|1) FN322-S.SNP.7:23504664 chr07:023504664 0 W/23504664-23504664 FN322-S Single Base Substitution C-T INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3459-S.SNP.7:23520952 chr07:023520952 0 W/23520952-23520952 FN3459-S SNP C -> T AC=2;AN=184;BQB=0.99879;DP=2963;DP4=1288,1560,7,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76703e-13;MQSB=0.926847;RPB=0.955517;SGB=93.9603;VDB=0.996266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.7:23532438 chr07:023532438 0 W/23532438-23532438 FN1266-S Single Base Substitution C-A INTRON HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2174-S.SNP.7:23537892 chr07:023537892 0 W/23537892-23537892 FN2174-S SNP A -> T AC=1;AN=168;BQB=0.7608;DP=4043;DP4=2069,1939,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.41674e-08;MQSB=0.990125;RPB=0.834925;SGB=8.48315;VDB=0.0406234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.7:23547471 chr07:023547471 0 W/23547471-23547471 FN1116-S Single Base Substitution A-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3787-S.SNP.7:23557396 chr07:023557396 0 W/23557396-23557396 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.981584;DP=3039;DP4=1411,1525,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.10158e-09;MQSB=0.680472;RPB=0.996938;SGB=39.6545;VDB=0.193257;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.7:23557824 chr07:023557824 0 W/23557824-23557824 FN821-S Single Base Substitution G-A INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN736-S.SNP.7:23560518 chr07:023560518 0 W/23560518-23560518 FN736-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g39320 homeobox domain containing protein, expressed SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2725-S.SNP.7:23571070 chr07:023571070 0 W/23571070-23571070 FN2725-S SNP G -> A AC=2;AN=200;BQB=0.605658;DP=4936;DP4=2186,2482,24,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.38748e-19;MQSB=0.882264;RPB=0.931075;SGB=-87.602;VDB=0.781402;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.7:23574105 chr07:023574105 0 W/23574105-23574105 FN3599-S SNP C -> G AC=1;AN=188;BQB=0.988425;DP=2810;DP4=1166,1567,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.52472e-10;MQSB=0.991121;RPB=0.930309;SGB=71.6954;VDB=0.962183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.7:23583843 chr07:023583843 0 W/23583843-23583843 FN1203-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g39350 transporter family protein, putative, expressed SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN849-S.SNP.7:23590777 chr07:023590777 0 W/23590777-23590777 FN849-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g39380 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2462.SNP.7:23591489 chr07:023591489 0 W/23591489-23591489 FN2462 SNP G -> A AC=1;AN=200;BQB=0.77519;DP=4475;DP4=2162,2021,11,5;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.225698;MQB=0.178943;MQSB=2.7094e-08;RPB=0.115949;SGB=68.0801;VDB=0.270422;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R345Q|1385|LOC_Os07g39380|protein_coding|CODING|LOC_Os07g39380.1|1|1) FN2205-S.SNP.7:23595289 chr07:023595289 0 W/23595289-23595289 FN2205-S SNP G -> A AC=2;AN=190;BQB=0.0215627;DP=4649;DP4=1766,2465,19,14;HOB=0.020831;ICB=0.494793;MQ=22;MQ0F=0.217251;MQB=0.741112;MQSB=0;RPB=0.888738;SGB=69.6295;VDB=0.616672;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.7:23596345 chr07:023596345 0 W/23596345-23596345 FN-259 Single Base Substitution G-A UTR_3_PRIME HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2175-S.SNP.7:23596619 chr07:023596619 0 W/23596619-23596619 FN2175-S SNP A -> C AC=1;AN=168;BQB=0.303335;DP=2259;DP4=876,1320,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00124002;MQSB=0.692723;RPB=0.824455;SGB=-17.9574;VDB=0.845817;EFF=UTR_3_PRIME(MODIFIER||325||171|LOC_Os07g39390|protein_coding|CODING|LOC_Os07g39390.1|1|1) FN3658-S.SNP.7:23612108 chr07:023612108 0 W/23612108-23612108 FN3658-S SNP G -> A AC=2;AN=190;BQB=0.383895;DP=2363;DP4=1160,1108,9,5;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.075328;MQB=0.165345;MQSB=0.000290003;RPB=0.480554;SGB=58.2031;VDB=0.706175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.7:23617301 chr07:023617301 0 W/23617301-23617301 FN2403 SNP C -> T AC=1;AN=200;BQB=0.948416;DP=5163;DP4=2555,2302,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.07774e-10;MQSB=0.907771;RPB=0.402413;SGB=68.0801;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.7:23617452 chr07:023617452 0 W/23617452-23617452 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.959596;DP=5041;DP4=2324,2511,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68509e-08;MQSB=0.965075;RPB=0.613859;SGB=33.0593;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.7:23618631 chr07:023618631 0 W/23618631-23618631 FN591-S Single Base Substitution T-A INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN585-S.SNP.7:23620997 chr07:023620997 0 W/23620997-23620997 FN585-S Single Base Substitution T-A INTRON HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN857-S.SNP.7:23628969 chr07:023628969 0 W/23628969-23628969 FN857-S Single Base Substitution G-A INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN3639-S.SNP.7:23633667 chr07:023633667 0 W/23633667-23633667 FN3639-S SNP T -> G AC=1;AN=190;BQB=0.679025;DP=2755;DP4=1285,1368,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.28518e-06;MQSB=0.991144;RPB=0.582787;SGB=28.9929;VDB=0.997223;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.7:23633793 chr07:023633793 0 W/23633793-23633793 FN1326-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2237-S.SNP.7:23635778 chr07:023635778 0 W/23635778-23635778 FN2237-S SNP C -> T AC=1;AN=190;BQB=0.285737;DP=4093;DP4=2027,1839,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.57817e-11;MQSB=0.0463925;RPB=0.569651;SGB=64.5316;VDB=0.620523;EFF=INTRON(MODIFIER||||1068|LOC_Os07g39460|protein_coding|CODING|LOC_Os07g39460.1|11|1) FN3312-S.SNP.7:23646806 chr07:023646806 0 W/23646806-23646806 FN3312-S SNP C -> A AC=1;AN=184;BQB=0.969949;DP=2585;DP4=1142,1286,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.80636e-07;MQSB=0.140623;RPB=0.951249;SGB=25.7969;VDB=0.988449;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.7:23647957 chr07:023647957 0 W/23647957-23647957 FN4249-S SNP A -> T AC=1;AN=170;BQB=0.987189;DP=2164;DP4=964,1129,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000462107;MQB=1.84181e-08;MQSB=0.994561;RPB=0.961805;SGB=17.4413;VDB=0.944267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.7:23665848 chr07:023665848 0 W/23665848-23665848 FN1709-S SNP G -> A AC=2;AN=188;BQB=0.0195301;DP=3519;DP4=1635,1809,29,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.4362e-16;MQSB=0.622978;RPB=0.836303;SGB=-0.330801;VDB=0.375159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.7:23689484 chr07:023689484 0 W/23689484-23689484 FN3532-S SNP C -> T AC=1;AN=188;BQB=0.661051;DP=2928;DP4=1404,1438,7,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8637e-11;MQSB=0.99984;RPB=0.937589;SGB=71.4172;VDB=0.84254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.7:23700268 chr07:023700268 0 W/23700268-23700268 FN3757-S SNP T -> A AC=1;AN=190;BQB=0.811894;DP=2947;DP4=1364,1410,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.91598e-11;MQSB=0.970817;RPB=0.995891;SGB=-38.5551;VDB=0.288858;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.7:23702266 chr07:023702266 0 W/23702266-23702266 FN1485-S Single Base Substitution G-T INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN4122-S.SNP.7:23709962 chr07:023709962 0 W/23709962-23709962 FN4122-S SNP C -> T AC=1;AN=182;BQB=0.977964;DP=2750;DP4=1281,1407,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.14084e-07;MQSB=0.99995;RPB=0.767912;SGB=44.1115;VDB=0.289677;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.7:23710591 chr07:023710591 0 W/23710591-23710591 FN-219 Single Base Substitution A-T INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1573-S.SNP.7:23717821 chr07:023717821 0 W/23717821-23717821 FN1573-S Single Base Substitution C-T INTRON HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2249-S.SNP.7:23723223 chr07:023723223 0 W/23723223-23723223 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.356958;DP=4427;DP4=1963,2231,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05368e-10;MQSB=0.984641;RPB=0.986232;SGB=50.3161;VDB=0.181446;EFF=SPLICE_SITE_REGION(LOW||||467|LOC_Os07g39590|protein_coding|CODING|LOC_Os07g39590.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K437|467|LOC_Os07g39590|protein_coding|CODING|LOC_Os07g39590.1|1|1) FN2249-S.SNP.7:23723224 chr07:023723224 0 W/23723224-23723224 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.999734;DP=4430;DP4=1992,2208,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87276e-08;MQSB=0.978905;RPB=0.997768;SGB=43.2083;VDB=0.0354851;EFF=SPLICE_SITE_DONOR(HIGH||||467|LOC_Os07g39590|protein_coding|CODING|LOC_Os07g39590.1|1|1),INTRON(MODIFIER||||467|LOC_Os07g39590|protein_coding|CODING|LOC_Os07g39590.1|1|1);LOF=(LOC_Os07g39590|LOC_Os07g39590|1|1.00) FN4185-S.SNP.7:23729788 chr07:023729788 0 W/23729788-23729788 FN4185-S SNP C -> T AC=2;AN=170;BQB=0.987225;DP=2562;DP4=1239,1263,8,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.00542e-09;MQSB=0.899628;RPB=0.762312;SGB=61.2001;VDB=0.682714;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.7:23730795 chr07:023730795 0 W/23730795-23730795 FN4024-S SNP T -> C AC=2;AN=168;BQB=0.82374;DP=2456;DP4=1192,1185,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.89238e-11;MQSB=0.941387;RPB=0.999705;SGB=27.0464;VDB=0.397502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.7:23737033 chr07:023737033 0 W/23737033-23737033 FN3914-S SNP G -> T AC=1;AN=158;BQB=0.770508;DP=2315;DP4=1140,1079,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0.0107991;MQB=0.742328;MQSB=0.2617;RPB=0.755887;SGB=47.0672;VDB=0.190012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.7:23738635 chr07:023738635 0 W/23738635-23738635 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.865517;DP=2506;DP4=1082,1314,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00239425;MQB=7.47529e-05;MQSB=0.99107;RPB=0.647933;SGB=44.5415;VDB=0.827669;EFF=INTRON(MODIFIER||||712|LOC_Os07g39610|protein_coding|CODING|LOC_Os07g39610.1|1|1) FN2629-S.SNP.7:23739514 chr07:023739514 0 W/23739514-23739514 FN2629-S SNP G -> C AC=1;AN=200;BQB=0.709095;DP=4887;DP4=2360,2232,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000613874;MQB=1.66867e-10;MQSB=0.952343;RPB=0.988055;SGB=91.1059;VDB=0.223667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E438Q|712|LOC_Os07g39610|protein_coding|CODING|LOC_Os07g39610.1|3|1) FN4172-S.SNP.7:23740121 chr07:023740121 0 W/23740121-23740121 FN4172-S SNP G -> A AC=2;AN=170;BQB=0.927677;DP=2294;DP4=1196,1027,11,13;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00043592;MQB=1.28977e-10;MQSB=0.963616;RPB=0.48753;SGB=101.184;VDB=0.267896;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L605|712|LOC_Os07g39610|protein_coding|CODING|LOC_Os07g39610.1|4|1) FN1661-S.SNP.7:23741442 chr07:023741442 0 W/23741442-23741442 FN1661-S Single Base Substitution A-G INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN4176-S.SNP.7:23742001 chr07:023742001 0 W/23742001-23742001 FN4176-S SNP G -> A AC=2;AN=170;BQB=0.895339;DP=1982;DP4=1068,771,13,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.77017e-08;MQSB=0.770136;RPB=0.736532;SGB=55.5339;VDB=0.708328;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.7:23742040 chr07:023742040 0 W/23742040-23742040 FN829-S Single Base Substitution A-T INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2216-S.SNP.7:23745672 chr07:023745672 0 W/23745672-23745672 FN2216-S SNP A -> G AC=1;AN=190;BQB=0.733077;DP=4537;DP4=2098,2146,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.46431e-05;MQSB=0.143968;RPB=0.98513;SGB=25.439;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.7:23751834 chr07:023751834 0 W/23751834-23751834 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.999798;DP=4337;DP4=2195,1907,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23524e-07;MQSB=0.86763;RPB=0.905653;SGB=10.9445;VDB=0.756871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.7:23754331 chr07:023754331 0 W/23754331-23754331 FN1025-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1582-S.SNP.7:23767125 chr07:023767125 0 W/23767125-23767125 FN1582-S Single Base Substitution G-A INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN684-S.SNP.7:23770635 chr07:023770635 0 W/23770635-23770635 FN684-S Single Base Substitution A-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN4190-S.SNP.7:23782877 chr07:023782877 0 W/23782877-23782877 FN4190-S SNP C -> A AC=2;AN=170;BQB=0.906502;DP=1827;DP4=794,989,7,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.04098e-08;MQSB=0.989133;RPB=0.253417;SGB=52.3148;VDB=0.905445;EFF=INTRON(MODIFIER||||89|LOC_Os07g39680|protein_coding|CODING|LOC_Os07g39680.1|2|1) FN4190-S.SNP.7:23782878 chr07:023782878 0 W/23782878-23782878 FN4190-S SNP T -> C AC=2;AN=170;BQB=0.654099;DP=1825;DP4=782,926,7,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.00781e-08;MQSB=0.980845;RPB=0.825152;SGB=-15.6616;VDB=0.991634;EFF=INTRON(MODIFIER||||89|LOC_Os07g39680|protein_coding|CODING|LOC_Os07g39680.1|2|1) FN1535-S.SNP.7:23784384 chr07:023784384 0 W/23784384-23784384 FN1535-S Single Base Substitution C-G INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1038-S.SNP.7:23790402 chr07:023790402 0 W/23790402-23790402 FN1038-S Single Base Substitution T-C INTRON HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN1685-S.SNP.7:23798865 chr07:023798865 0 W/23798865-23798865 FN1685-S SNP T -> C AC=1;AN=188;BQB=0.976099;DP=4021;DP4=2129,1851,14,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000248694;MQB=3.6208e-19;MQSB=0.965616;RPB=0.194301;SGB=103.307;VDB=0.828155;EFF=INTRON(MODIFIER||||159|LOC_Os07g39710|protein_coding|CODING|LOC_Os07g39710.1|4|1) FN1227-S.SNP.7:23803932 chr07:023803932 0 W/23803932-23803932 FN1227-S Single Base Substitution T-G INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1640-S.SNP.7:23810125 chr07:023810125 0 W/23810125-23810125 FN1640-S Single Base Substitution A-G INTRON HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN-100.SNP.7:23812120 chr07:023812120 0 W/23812120-23812120 FN-100 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g39730 ZCW7, putative, expressed SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN1366-S.SNP.7:23815365 chr07:023815365 0 W/23815365-23815365 FN1366-S Single Base Substitution T-G INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN-168.SNP.7:23824603 chr07:023824603 0 W/23824603-23824603 FN-168 Single Base Substitution C-A INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2257-S.SNP.7:23832777 chr07:023832777 0 W/23832777-23832777 FN2257-S SNP A -> T AC=1;AN=190;BQB=0.0707279;DP=4010;DP4=1773,1833,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.83616e-07;MQSB=0.000698136;RPB=0.29186;SGB=18.096;VDB=0.631784;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.7:23836260 chr07:023836260 0 W/23836260-23836260 FN3467-S SNP A -> G AC=1;AN=184;BQB=0.984801;DP=2403;DP4=1251,1081,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.29325e-09;MQSB=0.999761;RPB=0.621802;SGB=46.3132;VDB=0.625273;EFF=INTRON(MODIFIER||||639|LOC_Os07g39780|protein_coding|CODING|LOC_Os07g39780.1|4|1),INTRON(MODIFIER||||634|LOC_Os07g39780|protein_coding|CODING|LOC_Os07g39780.2|4|1),INTRON(MODIFIER||||406|LOC_Os07g39780|protein_coding|CODING|LOC_Os07g39780.3|4|1) FN2231-S.SNP.7:23844233 chr07:023844233 0 W/23844233-23844233 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.923738;DP=5019;DP4=2313,2346,17,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.35755e-18;MQSB=0.820142;RPB=0.99907;SGB=35.1887;VDB=0.847705;EFF=INTRON(MODIFIER||||622|LOC_Os07g39800|protein_coding|CODING|LOC_Os07g39800.1|2|1) W706-3-1.SNP.7:23853253 chr07:023853253 0 W/23853253-23853253 W706-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2485.SNP.7:23855936 chr07:023855936 0 W/23855936-23855936 FN2485 SNP G -> A AC=2;AN=200;BQB=0.914712;DP=5091;DP4=2431,2380,30,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.37982e-31;MQSB=0.828039;RPB=0.6834;SGB=195.292;VDB=0.320538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.7:23857134 chr07:023857134 0 W/23857134-23857134 FN1535-S Single Base Substitution A-G INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN981-S.SNP.7:23860160 chr07:023860160 0 W/23860160-23860160 FN981-S Single Base Substitution A-T INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2453.SNP.7:23873037 chr07:023873037 0 W/23873037-23873037 FN2453 SNP C -> T AC=1;AN=200;BQB=0.976371;DP=3918;DP4=1797,1839,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.38591e-11;MQSB=0.656152;RPB=0.916815;SGB=86.5007;VDB=0.786673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.7:23874043 chr07:023874043 0 W/23874043-23874043 FN3413-S SNP C -> G AC=1;AN=184;BQB=0.852594;DP=2708;DP4=1561,1042,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000369276;MQB=6.86655e-08;MQSB=0.496815;RPB=0.387017;SGB=46.3132;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.7:23876059 chr07:023876059 0 W/23876059-23876059 FN1540-S Single Base Substitution T-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3541-S.SNP.7:23881886 chr07:023881886 0 W/23881886-23881886 FN3541-S SNP A -> C AC=1;AN=188;BQB=0.288015;DP=2943;DP4=1497,1308,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000118774;MQSB=0.833367;RPB=0.654856;SGB=-0.634963;VDB=0.872842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.7:23885773 chr07:023885773 0 W/23885773-23885773 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.83469;DP=2736;DP4=1288,1329,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.5936e-12;MQSB=0.967217;RPB=0.744322;SGB=16.5421;VDB=0.559241;EFF=INTRON(MODIFIER||||373|LOC_Os07g39830|protein_coding|CODING|LOC_Os07g39830.1|1|1) FN883-S.SNP.7:23893021 chr07:023893021 0 W/23893021-23893021 FN883-S Single Base Substitution T-A INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2684-S.SNP.7:23893812 chr07:023893812 0 W/23893812-23893812 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.559127;DP=4677;DP4=2346,2038,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.21607e-16;MQSB=0.999242;RPB=0.325401;SGB=50.3263;VDB=0.100132;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN-132 Single Base Substitution A-G INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1230-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN1230-S Single Base Substitution A-G INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1385-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN1385-S Single Base Substitution A-G INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1696-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN1696-S SNP A -> G AC=1;AN=188;BQB=7.1186e-06;DP=3473;DP4=1626,1718,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00199762;MQSB=0.708381;RPB=0.368888;SGB=-216.587;VDB=0.869865;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.0227078;DP=3594;DP4=1706,1758,7,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.18277e-11;MQSB=0.719477;RPB=0.977806;SGB=-42.3508;VDB=0.843222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN2358 SNP A -> G AC=1;AN=192;BQB=0.990944;DP=4702;DP4=2018,2245,4,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.00366787;MQSB=0.999162;RPB=0.77751;SGB=18.3944;VDB=0.511899;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN412-S Single Base Substitution A-G INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN421-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN421-S Single Base Substitution A-G INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN661-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN661-S Single Base Substitution A-G INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN737-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN737-S Single Base Substitution A-G INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN875-S.SNP.7:23902626 chr07:023902626 0 W/23902626-23902626 FN875-S Single Base Substitution A-G INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN-123.SNP.7:23909274 chr07:023909274 0 W/23909274-23909274 FN-123 Single Base Substitution T-G INTERGENIC HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3453-S.SNP.7:23921957 chr07:023921957 0 W/23921957-23921957 FN3453-S SNP G -> A AC=1;AN=184;BQB=0.818769;DP=3106;DP4=1500,1462,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.40102e-05;MQSB=0.637312;RPB=0.269373;SGB=13.188;VDB=0.809714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.7:23925435 chr07:023925435 0 W/23925435-23925435 FN1329-S Single Base Substitution A-T INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-164.SNP.7:23939295 chr07:023939295 0 W/23939295-23939295 FN-164 Single Base Substitution T-A INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN778-S.SNP.7:23951939 chr07:023951939 0 W/23951939-23951939 FN778-S Single Base Substitution G-C INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1540-S.SNP.7:23952032 chr07:023952032 0 W/23952032-23952032 FN1540-S Single Base Substitution T-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN961-S.SNP.7:23954697 chr07:023954697 0 W/23954697-23954697 FN961-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g39930 expressed protein SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN4101-S.SNP.7:23959339 chr07:023959339 0 W/23959339-23959339 FN4101-S SNP T -> C AC=2;AN=182;BQB=0.823465;DP=2741;DP4=1265,1391,6,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.11914e-08;MQSB=0.897703;RPB=0.987604;SGB=71.1765;VDB=0.66434;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.7:23959451 chr07:023959451 0 W/23959451-23959451 FN-153 Single Base Substitution G-A INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3426-S.SNP.7:23960585 chr07:023960585 0 W/23960585-23960585 FN3426-S SNP T -> A AC=1;AN=184;BQB=0.957163;DP=2422;DP4=1142,1201,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.17061e-07;MQSB=0.99758;RPB=0.0648227;SGB=44.2207;VDB=0.110512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.7:23965658 chr07:023965658 0 W/23965658-23965658 FN3282-S SNP C -> A AC=1;AN=184;BQB=0.998186;DP=3420;DP4=1817,1473,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.31892e-10;MQSB=0.967529;RPB=0.937694;SGB=30.8405;VDB=0.232648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.7:23972237 chr07:023972237 0 W/23972237-23972237 FN2752-S SNP T -> A AC=2;AN=200;BQB=0.630415;DP=4542;DP4=2338,1954,17,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.36439e-19;MQSB=0.993261;RPB=0.791682;SGB=105.163;VDB=0.750394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.7:23976478 chr07:023976478 0 W/23976478-23976478 FN1440-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g39960 ZOS7-07 - C2H2 zinc finger protein, expressed SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN4247-S.SNP.7:23976674 chr07:023976674 0 W/23976674-23976674 FN4247-S SNP C -> T AC=1;AN=170;BQB=0.564346;DP=2480;DP4=1212,1198,12,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.8472e-10;MQSB=0.935239;RPB=0.991241;SGB=83.4133;VDB=0.841787;EFF=INTRON(MODIFIER||||378|LOC_Os07g39960|protein_coding|CODING|LOC_Os07g39960.1|6|1) FN483-S.SNP.7:23979217 chr07:023979217 0 W/23979217-23979217 FN483-S Single Base Substitution A-G INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1642-S.SNP.7:23986694 chr07:023986694 0 W/23986694-23986694 FN1642-S Single Base Substitution C-T INTRON Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1180-S.SNP.7:23995247 chr07:023995247 0 W/23995247-23995247 FN1180-S Single Base Substitution C-G INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN-162.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN-162 Single Base Substitution T-G INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1228-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN1228-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1270-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN1270-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1326-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN1326-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1414-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN1414-S Single Base Substitution T-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN434-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN434-S Single Base Substitution T-G INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN440-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN440-S Single Base Substitution T-G INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN724-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN724-S Single Base Substitution T-G INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN873-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN873-S Single Base Substitution T-G INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN961-S.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN961-S Single Base Substitution T-G INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN_846-8-1.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 FN_846-8-1 Single Base Substitution T-G Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. W706-3-1.SNP.7:23995263 chr07:023995263 0 W/23995263-23995263 W706-3-1 Single Base Substitution T-G INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN969-S.SNP.7:23997954 chr07:023997954 0 W/23997954-23997954 FN969-S Single Base Substitution C-T INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN2645-S.SNP.7:24000935 chr07:024000935 0 W/24000935-24000935 FN2645-S SNP T -> A AC=1;AN=200;BQB=0.741448;DP=4841;DP4=2165,2467,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.91273e-18;MQSB=0.985972;RPB=0.774816;SGB=58.1418;VDB=0.806332;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.7:24004742 chr07:024004742 0 W/24004742-24004742 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.94013;DP=4786;DP4=1872,2593,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.49544e-06;MQSB=0.999789;RPB=0.443764;SGB=39.6545;VDB=0.656766;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.7:24005781 chr07:024005781 0 W/24005781-24005781 CW-631-3-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN3364-S.SNP.7:24005781 chr07:024005781 0 W/24005781-24005781 FN3364-S SNP C -> A AC=1;AN=184;BQB=0.378791;DP=2729;DP4=1321,1306,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00015532;MQSB=0.84096;RPB=0.90655;SGB=25.1826;VDB=0.894468;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.7:24005781 chr07:024005781 0 W/24005781-24005781 FN919-S Single Base Substitution C-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2556-S.SNP.7:24010192 chr07:024010192 0 W/24010192-24010192 FN2556-S SNP C -> T AC=2;AN=198;BQB=0.883563;DP=4244;DP4=1953,2073,14,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.23282e-22;MQSB=0.957599;RPB=0.946262;SGB=178.212;VDB=0.367549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.7:24018893 chr07:024018893 0 W/24018893-24018893 FN3419-S SNP A -> G AC=2;AN=184;BQB=0.803558;DP=2771;DP4=1558,1105,17,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.00616e-12;MQSB=0.929762;RPB=0.94134;SGB=107.526;VDB=0.468726;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.7:24019751 chr07:024019751 0 W/24019751-24019751 FN473-S Single Base Substitution G-A INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN-228.SNP.7:24033496 chr07:024033496 0 W/24033496-24033496 FN-228 Single Base Substitution G-A INTERGENIC HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN_398-1.SNP.7:24046161 chr07:024046161 0 W/24046161-24046161 FN_398-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN-104.SNP.7:24047745 chr07:024047745 0 W/24047745-24047745 FN-104 Single Base Substitution G-C INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN2788-S.SNP.7:24047961 chr07:024047961 0 W/24047961-24047961 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.867007;DP=4000;DP4=2061,1758,21,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.61435e-16;MQSB=0.958023;RPB=0.9861;SGB=150.641;VDB=0.884465;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.7:24055878 chr07:024055878 0 W/24055878-24055878 FN1284-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN-175.SNP.7:24056222 chr07:024056222 0 W/24056222-24056222 FN-175 Single Base Substitution T-G INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1483-S.SNP.7:24056875 chr07:024056875 0 W/24056875-24056875 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN_788-1-1.SNP.7:24062575 chr07:024062575 0 W/24062575-24062575 FN_788-1-1 Single Base Substitution C-T Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2498.SNP.7:24068638 chr07:024068638 0 W/24068638-24068638 FN2498 SNP C -> G AC=1;AN=200;BQB=0.995608;DP=4412;DP4=2211,1970,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.95125e-09;MQSB=0.698162;RPB=0.407016;SGB=40.2696;VDB=0.753576;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.7:24069972 chr07:024069972 0 W/24069972-24069972 FN-176 Single Base Substitution C-T INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2559-S.SNP.7:24084148 chr07:024084148 0 W/24084148-24084148 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.0351521;DP=4265;DP4=1933,2088,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234467;MQB=2.62459e-05;MQSB=0.73593;RPB=0.787603;SGB=11.1786;VDB=0.324775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.7:24088106 chr07:024088106 0 W/24088106-24088106 FN3723-S SNP G -> A AC=2;AN=190;BQB=0.429867;DP=2788;DP4=1581,1115,9,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.73633e-07;MQSB=0.918502;RPB=0.994091;SGB=67.3108;VDB=0.407768;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D398|518|LOC_Os07g40150|protein_coding|CODING|LOC_Os07g40150.1|3|1) FN-225.SNP.7:24088619 chr07:024088619 0 W/24088619-24088619 FN-225 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g40150 expressed protein SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3375-S.SNP.7:24100124 chr07:024100124 0 W/24100124-24100124 FN3375-S SNP T -> A AC=1;AN=184;BQB=0.884314;DP=3505;DP4=1663,1684,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.226e-09;MQSB=0.549769;RPB=0.522806;SGB=23.2751;VDB=0.48095;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.7:24100446 chr07:024100446 0 W/24100446-24100446 FN775-S Single Base Substitution C-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN775-S.SNP.7:24100447 chr07:024100447 0 W/24100447-24100447 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN464-S.SNP.7:24100471 chr07:024100471 0 W/24100471-24100471 FN464-S Single Base Substitution G-A INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3413-S.SNP.7:24101151 chr07:024101151 0 W/24101151-24101151 FN3413-S SNP T -> G AC=1;AN=184;BQB=0.985373;DP=2590;DP4=1028,1449,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.24345e-05;MQSB=0.928555;RPB=0.119461;SGB=21.6609;VDB=0.0666388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.7:24102170 chr07:024102170 0 W/24102170-24102170 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.742465;DP=2191;DP4=1074,986,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.11492e-08;MQSB=0.95118;RPB=0.972279;SGB=50.9207;VDB=0.996755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.7:24107389 chr07:024107389 0 W/24107389-24107389 FN2360 SNP G -> T AC=1;AN=192;BQB=0.624149;DP=4789;DP4=2116,2345,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.8584e-14;MQSB=0.236455;RPB=0.861764;SGB=-9.68954;VDB=0.642318;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.7:24115330 chr07:024115330 0 W/24115330-24115330 FN-184 Single Base Substitution C-T INTERGENIC HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1336-S.SNP.7:24120893 chr07:024120893 0 W/24120893-24120893 FN1336-S Single Base Substitution A-C INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN-206.SNP.7:24131613 chr07:024131613 0 W/24131613-24131613 FN-206 Single Base Substitution C-T INTRON HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2795-S.SNP.7:24134553 chr07:024134553 0 W/24134553-24134553 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.999986;DP=4203;DP4=2120,1892,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22295e-12;MQSB=0.99895;RPB=0.993209;SGB=68.91;VDB=0.465576;EFF=INTRON(MODIFIER||||631|LOC_Os07g40260|protein_coding|CODING|LOC_Os07g40260.1|4|1),INTRON(MODIFIER||||526|LOC_Os07g40260|protein_coding|CODING|LOC_Os07g40260.2|4|1) FN2626-S.SNP.7:24143401 chr07:024143401 0 W/24143401-24143401 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.81627;DP=4596;DP4=2086,2260,4,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.30451e-05;MQSB=0.973546;RPB=0.650243;SGB=26.6347;VDB=0.545382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.7:24147330 chr07:024147330 0 W/24147330-24147330 FN2269-S SNP C -> A AC=1;AN=190;BQB=0.166867;DP=4425;DP4=2030,2144,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14538e-14;MQSB=0.99093;RPB=0.964033;SGB=18.096;VDB=0.318929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.7:24148303 chr07:024148303 0 W/24148303-24148303 FN1200-S Single Base Substitution G-T INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1429-S.SNP.7:24151573 chr07:024151573 0 W/24151573-24151573 FN1429-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g40290 OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-206.SNP.7:24152184 chr07:024152184 0 W/24152184-24152184 FN-206 Single Base Substitution A-T INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN_770-6-1.SNP.7:24156166 chr07:024156166 0 W/24156166-24156166 FN_770-6-1 Single Base Substitution T-A Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN4088-S.SNP.7:24168479 chr07:024168479 0 W/24168479-24168479 FN4088-S SNP G -> T AC=2;AN=182;BQB=0.981703;DP=3067;DP4=1378,1601,12,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.28818e-16;MQSB=0.999693;RPB=0.777006;SGB=111.774;VDB=0.547798;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.7:24168482 chr07:024168482 0 W/24168482-24168482 FN4088-S SNP A -> T AC=2;AN=182;BQB=0.903696;DP=3070;DP4=1202,1597,16,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.70424e-17;MQSB=0.960059;RPB=0.598702;SGB=-81.6818;VDB=0.858235;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.7:24175634 chr07:024175634 0 W/24175634-24175634 FN975-S Single Base Substitution A-G INTERGENIC HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN670-S.SNP.7:24179305 chr07:024179305 0 W/24179305-24179305 FN670-S Single Base Substitution A-G INTRON HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3774-S.SNP.7:24190671 chr07:024190671 0 W/24190671-24190671 FN3774-S SNP G -> A AC=1;AN=190;BQB=0.906379;DP=3370;DP4=1462,1798,5,19;HOB=5.54017e-05;ICB=0.000111386;MQ=15;MQ0F=0.559644;MQB=0.0254217;MQSB=9.62045e-13;RPB=0.981801;SGB=103.742;VDB=0.164172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.7:24192114 chr07:024192114 0 W/24192114-24192114 FN2350 SNP T -> A AC=2;AN=192;BQB=0.994036;DP=4992;DP4=2495,2221,27,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.80118e-23;MQSB=0.000833668;RPB=0.86964;SGB=3.29047;VDB=0.0101955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.7:24195456 chr07:024195456 0 W/24195456-24195456 FN2240-S SNP C -> T AC=1;AN=190;BQB=0.63935;DP=5017;DP4=2569,2185,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29512e-07;MQSB=0.970237;RPB=0.772273;SGB=1.00337;VDB=0.000784718;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.7:24197834 chr07:024197834 0 W/24197834-24197834 FN4113-S SNP T -> A AC=1;AN=182;BQB=0.976088;DP=2914;DP4=1391,1399,19,20;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.17758e-22;MQSB=0.999859;RPB=0.701863;SGB=83.4047;VDB=0.926388;EFF=INTRON(MODIFIER||||498|LOC_Os07g40350|protein_coding|CODING|LOC_Os07g40350.1|3|1) FN2774-S.SNP.7:24198299 chr07:024198299 0 W/24198299-24198299 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.858694;DP=4089;DP4=1996,1842,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.92411e-07;MQSB=0.977489;RPB=0.99878;SGB=43.7442;VDB=0.520002;EFF=INTRON(MODIFIER||||498|LOC_Os07g40350|protein_coding|CODING|LOC_Os07g40350.1|3|1) FN2687-S.SNP.7:24198867 chr07:024198867 0 W/24198867-24198867 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.875865;DP=4562;DP4=2221,2111,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21174e-05;MQSB=0.912599;RPB=0.996732;SGB=31.2392;VDB=0.457239;EFF=INTRON(MODIFIER||||498|LOC_Os07g40350|protein_coding|CODING|LOC_Os07g40350.1|3|1) FN879-S.SNP.7:24200662 chr07:024200662 0 W/24200662-24200662 FN879-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g40360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN4148-S.SNP.7:24203288 chr07:024203288 0 W/24203288-24203288 FN4148-S SNP A -> T AC=1;AN=170;BQB=0.999949;DP=2808;DP4=1379,1367,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.70784e-10;MQSB=0.966263;RPB=0.108462;SGB=65.6427;VDB=0.333474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.7:24203645 chr07:024203645 0 W/24203645-24203645 FN2163-S SNP T -> C AC=2;AN=168;BQB=5.7774e-05;DP=3572;DP4=1587,1934,14,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.45541e-12;MQSB=0.998304;RPB=0.851116;SGB=-214.311;VDB=0.418184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.7:24204869 chr07:024204869 0 W/24204869-24204869 FN1761-S SNP T -> G AC=1;AN=188;BQB=4.04435e-11;DP=3529;DP4=1757,1670,13,35;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0033774;MQSB=0.580194;RPB=0.0265394;SGB=-1205.99;VDB=0.0244282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.7:24205706 chr07:024205706 0 W/24205706-24205706 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.105247;DP=4562;DP4=2187,2166,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219202;MQB=2.98145e-06;MQSB=0.945479;RPB=0.711417;SGB=13.8539;VDB=0.281503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.7:24205708 chr07:024205708 0 W/24205708-24205708 FN2702-S SNP T -> G AC=1;AN=200;BQB=0.287042;DP=4558;DP4=2142,2215,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219394;MQB=7.32575e-07;MQSB=0.805989;RPB=0.997813;SGB=25.849;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.7:24205960 chr07:024205960 0 W/24205960-24205960 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.149577;DP=2636;DP4=1293,1241,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00828241;MQSB=0.908237;RPB=0.576527;SGB=25.439;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.7:24214188 chr07:024214188 0 W/24214188-24214188 FN1543-S Single Base Substitution A-T INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN3437-S.SNP.7:24214529 chr07:024214529 0 W/24214529-24214529 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.925774;DP=2550;DP4=1270,1202,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000153219;MQSB=0.555079;RPB=0.417828;SGB=35.1773;VDB=0.659154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.7:24214659 chr07:024214659 0 W/24214659-24214659 FN1012-S Single Base Substitution T-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2494.SNP.7:24218747 chr07:024218747 0 W/24218747-24218747 FN2494 SNP G -> A AC=1;AN=200;BQB=0.342949;DP=3917;DP4=2034,1609,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000255297;MQB=1.15515e-07;MQSB=0.516091;RPB=0.138339;SGB=9.48993;VDB=0.367594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.7:24219850 chr07:024219850 0 W/24219850-24219850 FN2650-S SNP T -> C AC=2;AN=200;BQB=0.844877;DP=5653;DP4=2735,2697,18,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03165e-16;MQSB=1;RPB=0.151633;SGB=73.7728;VDB=0.0244862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.7:24226156 chr07:024226156 0 W/24226156-24226156 FN1304-S Single Base Substitution G-A INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2358.SNP.7:24236344 chr07:024236344 0 W/24236344-24236344 FN2358 SNP T -> C AC=1;AN=192;BQB=0.745174;DP=5065;DP4=2240,2484,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.77923e-06;MQSB=0.0315831;RPB=0.924763;SGB=36.607;VDB=0.940472;EFF=INTRON(MODIFIER||||447|LOC_Os07g40434|protein_coding|CODING|LOC_Os07g40434.1|4|1) FN3598-S.SNP.7:24239814 chr07:024239814 0 W/24239814-24239814 FN3598-S SNP G -> T AC=1;AN=188;BQB=0.949178;DP=2475;DP4=921,1508,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000808081;MQB=1.55368e-08;MQSB=0.0459239;RPB=0.680976;SGB=39.5276;VDB=0.686276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.7:24243282 chr07:024243282 0 W/24243282-24243282 FN3598-S SNP G -> T AC=1;AN=188;BQB=0.698318;DP=3303;DP4=1688,1464,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.79829e-08;MQSB=0.676397;RPB=0.978736;SGB=43.0708;VDB=0.724784;EFF=UTR_5_PRIME(MODIFIER||323||250|LOC_Os07g40450|protein_coding|CODING|LOC_Os07g40450.1|1|1),UTR_5_PRIME(MODIFIER||323||223|LOC_Os07g40450|protein_coding|CODING|LOC_Os07g40450.2|1|1) FN3694-S.SNP.7:24247187 chr07:024247187 0 W/24247187-24247187 FN3694-S SNP A -> T AC=1;AN=190;BQB=0.97579;DP=2946;DP4=1437,1413,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34353e-05;MQSB=0.999793;RPB=0.913736;SGB=30.8803;VDB=0.945084;EFF=UTR_3_PRIME(MODIFIER||203||149|LOC_Os07g40460|protein_coding|CODING|LOC_Os07g40460.1|5|1),UTR_3_PRIME(MODIFIER||203||85|LOC_Os07g40460|protein_coding|CODING|LOC_Os07g40460.3|5|1) FN4221-S.SNP.7:24256724 chr07:024256724 0 W/24256724-24256724 FN4221-S SNP G -> A AC=1;AN=170;BQB=0.64725;DP=2579;DP4=1203,1293,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000149902;MQSB=0.994101;RPB=0.660447;SGB=38.987;VDB=0.294276;EFF=INTRON(MODIFIER||||294|LOC_Os07g40480|protein_coding|CODING|LOC_Os07g40480.1|2|1) FN2279-S.SNP.7:24259100 chr07:024259100 0 W/24259100-24259100 FN2279-S SNP T -> C AC=2;AN=190;BQB=0.730462;DP=4980;DP4=2567,2029,23,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.27792e-23;MQSB=0.974972;RPB=0.114739;SGB=156.932;VDB=0.0945885;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.7:24261928 chr07:024261928 0 W/24261928-24261928 FN2361 SNP C -> T AC=1;AN=192;BQB=0.93446;DP=5154;DP4=2599,2201,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.00442e-18;MQSB=0.991151;RPB=0.987079;SGB=67.3792;VDB=0.612875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.7:24272386 chr07:024272386 0 W/24272386-24272386 FN2191-S SNP A -> C AC=1;AN=190;BQB=0.955037;DP=4707;DP4=2075,2169,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2667e-08;MQSB=0.15002;RPB=0.959296;SGB=23.6597;VDB=0.835093;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tGa|L315*|741|LOC_Os07g40510|protein_coding|CODING|LOC_Os07g40510.1|1|1);LOF=(LOC_Os07g40510|LOC_Os07g40510|1|1.00);NMD=(LOC_Os07g40510|LOC_Os07g40510|1|1.00) FN-308.SNP.7:24274175 chr07:024274175 0 W/24274175-24274175 FN-308 Single Base Substitution C-A INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2708-S.SNP.7:24274756 chr07:024274756 0 W/24274756-24274756 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.999981;DP=5298;DP4=2621,2471,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.65372e-11;MQSB=0.925659;RPB=0.968171;SGB=39.9056;VDB=0.665281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E470G|637|LOC_Os07g40520|protein_coding|CODING|LOC_Os07g40520.1|4|1) FN-30.SNP.7:24278356 chr07:024278356 0 W/24278356-24278356 FN-30 Single Base Substitution A-G INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN1501-S.SNP.7:24305145 chr07:024305145 0 W/24305145-24305145 FN1501-S Single Base Substitution G-A INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN795-S.SNP.7:24312719 chr07:024312719 0 W/24312719-24312719 FN795-S Single Base Substitution T-A INTRON HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2791-S.SNP.7:24317562 chr07:024317562 0 W/24317562-24317562 FN2791-S SNP A -> G AC=1;AN=198;BQB=0.568097;DP=4116;DP4=1955,1952,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.27393e-10;MQSB=0.953205;RPB=0.880826;SGB=81.7147;VDB=0.309556;EFF=INTERGENIC(MODIFIER||||||||||1) FN1648-S.SNP.7:24321002 chr07:024321002 0 W/24321002-24321002 FN1648-S Single Base Substitution A-G INTERGENIC Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN4077-S.SNP.7:24329270 chr07:024329270 0 W/24329270-24329270 FN4077-S SNP C -> T AC=1;AN=182;BQB=0.910813;DP=4292;DP4=1901,2270,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=31;MQ0F=0.130708;MQB=0.632808;MQSB=5.33058e-05;RPB=0.818999;SGB=49.6712;VDB=0.197752;EFF=INTRON(MODIFIER||||71|LOC_Os07g40600|protein_coding|CODING|LOC_Os07g40600.1|1|1) FN4164-S.SNP.7:24339059 chr07:024339059 0 W/24339059-24339059 FN4164-S SNP C -> A AC=2;AN=170;BQB=0.99264;DP=2342;DP4=1198,1020,13,15;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0;MQB=1.18899e-08;MQSB=0.813419;RPB=0.552182;SGB=86.5178;VDB=0.153135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.7:24370517 chr07:024370517 0 W/24370517-24370517 FN3503-S SNP C -> T AC=2;AN=188;BQB=0.984095;DP=3416;DP4=1746,1570,12,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=2.05809e-07;MQSB=0.982484;RPB=0.744551;SGB=85.3253;VDB=0.401117;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.7:24370617 chr07:024370617 0 W/24370617-24370617 FN814-S Single Base Substitution G-A INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN_815-4-1.SNP.7:24373088 chr07:024373088 0 W/24373088-24373088 FN_815-4-1 Single Base Substitution G-C Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN1381-S.SNP.7:24374701 chr07:024374701 0 W/24374701-24374701 FN1381-S Single Base Substitution A-G INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2178-S.SNP.7:24375185 chr07:024375185 0 W/24375185-24375185 FN2178-S SNP C -> A AC=2;AN=168;BQB=0.0007538;DP=3056;DP4=1764,1233,41,7;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000327225;MQB=8.10827e-18;MQSB=0.000786067;RPB=0.902916;SGB=-369.422;VDB=0.395834;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.7:24399436 chr07:024399436 0 W/24399436-24399436 FN769-S Single Base Substitution C-T INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1617-S.SNP.7:24405229 chr07:024405229 0 W/24405229-24405229 FN1617-S Single Base Substitution C-G INTRON HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2456.SNP.7:24413735 chr07:024413735 0 W/24413735-24413735 FN2456 SNP A -> T AC=1;AN=200;BQB=0.879548;DP=5097;DP4=2507,2212,7,4;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.0172812;MQSB=0.250331;RPB=0.143293;SGB=-1.74624;VDB=0.78834;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S856|1166|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.1|19|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S856|1162|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.2|19|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S856|1100|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.3|19|1) FN2455.SNP.7:24413986 chr07:024413986 0 W/24413986-24413986 FN2455 SNP T -> G AC=2;AN=200;BQB=0.844899;DP=5049;DP4=2146,2632,28,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.4059e-33;MQSB=0.999412;RPB=0.109142;SGB=266.102;VDB=0.637754;EFF=INTRON(MODIFIER||||1166|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.1|19|1),INTRON(MODIFIER||||1162|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.2|19|1),INTRON(MODIFIER||||1100|LOC_Os07g40730|protein_coding|CODING|LOC_Os07g40730.3|19|1) FN2125-S.SNP.7:24431999 chr07:024431999 0 W/24431999-24431999 FN2125-S SNP T -> A AC=1;AN=168;BQB=0.995235;DP=3805;DP4=1618,2153,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.31139e-12;MQSB=0.999895;RPB=0.987044;SGB=62.1945;VDB=0.682478;EFF=INTRON(MODIFIER||||454|LOC_Os07g40770|protein_coding|CODING|LOC_Os07g40770.1|2|1) FN3430-S.SNP.7:24432133 chr07:024432133 0 W/24432133-24432133 FN3430-S SNP G -> A AC=2;AN=184;BQB=0.972945;DP=2259;DP4=1004,1178,7,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=7.28073e-08;MQSB=0.0029189;RPB=0.996678;SGB=80.3949;VDB=0.861387;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L33F|454|LOC_Os07g40770|protein_coding|CODING|LOC_Os07g40770.1|2|1) FN-334.SNP.7:24458036 chr07:024458036 0 W/24458036-24458036 FN-334 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g40810 NBS-LRR type disease resistance protein, putative, expressed SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN848-S.SNP.7:24505632 chr07:024505632 0 W/24505632-24505632 FN848-S Single Base Substitution A-T INTRON HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1084-S.SNP.7:24513065 chr07:024513065 0 W/24513065-24513065 FN1084-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g40950 ZOS7-12 - C2H2 zinc finger protein, expressed SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN685-S.SNP.7:24530253 chr07:024530253 0 W/24530253-24530253 FN685-S Single Base Substitution A-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN788-S.SNP.7:24555291 chr07:024555291 0 W/24555291-24555291 FN788-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g41050 NAD dependent epimerase/dehydratase family protein, putative, expressed SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2403.SNP.7:24556081 chr07:024556081 0 W/24556081-24556081 FN2403 SNP G -> A AC=1;AN=200;BQB=0.997782;DP=3635;DP4=2044,1443,13,3;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=0.0103622;MQSB=3.14394e-16;RPB=0.999319;SGB=68.0801;VDB=0.998519;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W303*|410|LOC_Os07g41050|protein_coding|CODING|LOC_Os07g41050.1|1|1) FN1674-S.SNP.7:24569108 chr07:024569108 0 W/24569108-24569108 FN1674-S SNP A -> C AC=1;AN=188;BQB=0.108856;DP=3790;DP4=1521,2215,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.82291e-05;MQSB=0.0132105;RPB=0.67625;SGB=-39.1914;VDB=0.0616845;EFF=INTRON(MODIFIER||||340|LOC_Os07g41070|protein_coding|CODING|LOC_Os07g41070.1|3|1) FN2497.SNP.7:24569426 chr07:024569426 0 W/24569426-24569426 FN2497 SNP T -> C AC=1;AN=200;BQB=0.253032;DP=4770;DP4=1997,2529,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35436e-05;MQSB=0.994078;RPB=0.997919;SGB=25.849;VDB=0.995231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K97E|340|LOC_Os07g41070|protein_coding|CODING|LOC_Os07g41070.1|3|1) FN453-S.SNP.7:24576743 chr07:024576743 0 W/24576743-24576743 FN453-S Single Base Substitution A-G INTRON HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1375-S.SNP.7:24587982 chr07:024587982 0 W/24587982-24587982 FN1375-S Single Base Substitution G-T INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN-339.SNP.7:24596961 chr07:024596961 0 W/24596961-24596961 FN-339 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g41090 histone deacetylase, putative, expressed SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN438-S.SNP.7:24599700 chr07:024599700 0 W/24599700-24599700 FN438-S Single Base Substitution T-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN4038-S.SNP.7:24600361 chr07:024600361 0 W/24600361-24600361 FN4038-S SNP C -> T AC=2;AN=168;BQB=0.916261;DP=2825;DP4=1530,1148,25,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.99848e-19;MQSB=0.735789;RPB=0.925298;SGB=162.943;VDB=0.519998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.7:24600784 chr07:024600784 0 W/24600784-24600784 FN1636-S Single Base Substitution A-T INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1034-S.SNP.7:24601872 chr07:024601872 0 W/24601872-24601872 FN1034-S Single Base Substitution G-A INTRON HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN-175.SNP.7:24602081 chr07:024602081 0 W/24602081-24602081 FN-175 Single Base Substitution A-G INTRON HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1760-S.SNP.7:24605823 chr07:024605823 0 W/24605823-24605823 FN1760-S SNP G -> A AC=2;AN=188;BQB=0.364208;DP=1465;DP4=793,628,8,8;HOB=0.0210502;ICB=0.494738;MQ=28;MQ0F=0.00750853;MQB=0.576283;MQSB=2.06232e-10;RPB=0.86513;SGB=67.1521;VDB=0.293362;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P804|1690|LOC_Os07g41110|protein_coding|CODING|LOC_Os07g41110.1|3|1) FN2160-S.SNP.7:24632813 chr07:024632813 0 W/24632813-24632813 FN2160-S SNP T -> C AC=1;AN=168;BQB=0.476688;DP=3200;DP4=1314,1858,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000167775;MQSB=0.975022;RPB=0.546117;SGB=-16.2342;VDB=0.651573;EFF=INTRON(MODIFIER||||319|LOC_Os07g41160|protein_coding|CODING|LOC_Os07g41160.2|2|1) FN733-S.SNP.7:24636691 chr07:024636691 0 W/24636691-24636691 FN733-S Single Base Substitution C-T INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN-124.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN-124 Single Base Substitution A-T INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN-175.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN-175 Single Base Substitution A-T INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2486.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN2486 SNP A -> T AC=1;AN=200;BQB=0.442624;DP=4749;DP4=1936,2574,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33476e-08;MQSB=0.985274;RPB=0.862666;SGB=58.2954;VDB=0.801574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN3491-S SNP A -> T AC=2;AN=188;BQB=0.992548;DP=2496;DP4=1104,1341,6,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.678e-07;MQSB=0.972736;RPB=0.500433;SGB=39.5276;VDB=0.124446;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN4063-S SNP A -> T AC=1;AN=168;BQB=0.473634;DP=2392;DP4=977,1333,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.59573e-06;MQSB=0.873981;RPB=0.999823;SGB=29.4772;VDB=0.64913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.7:24641655 chr07:024641655 0 W/24641655-24641655 FN4095-S SNP A -> T AC=2;AN=182;BQB=0.99958;DP=2603;DP4=1145,1396,8,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.58177e-11;MQSB=0.972865;RPB=0.584699;SGB=33.1875;VDB=0.566015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.7:24647951 chr07:024647951 0 W/24647951-24647951 FN2645-S SNP G -> A AC=2;AN=200;BQB=0.377591;DP=5114;DP4=2329,2432,25,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.98349e-26;MQSB=0.890979;RPB=0.834492;SGB=-47.1605;VDB=0.992293;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.7:24650246 chr07:024650246 0 W/24650246-24650246 FN3887-S SNP C -> T AC=1;AN=158;BQB=0.355962;DP=2130;DP4=593,1408,6,13;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=9.88054e-07;MQSB=1.5141e-11;RPB=0.999939;SGB=-15.7992;VDB=0.696646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.7:24652510 chr07:024652510 0 W/24652510-24652510 FN2434 SNP G -> A AC=2;AN=200;BQB=0.830666;DP=3667;DP4=2116,1362,11,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.26545e-11;MQSB=0.901382;RPB=0.227463;SGB=58.2954;VDB=0.0854589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.7:24666409 chr07:024666409 0 W/24666409-24666409 FN2231-S SNP G -> T AC=1;AN=190;BQB=0.498065;DP=4521;DP4=2178,1970,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33868e-08;MQSB=0.966989;RPB=0.960092;SGB=58.2031;VDB=0.0394663;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A514D|940|LOC_Os07g41200|protein_coding|CODING|LOC_Os07g41200.1|3|1) FN2222-S.SNP.7:24667030 chr07:024667030 0 W/24667030-24667030 FN2222-S SNP G -> A AC=2;AN=190;BQB=0.0100714;DP=4198;DP4=1950,1921,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000238209;MQB=2.94178e-20;MQSB=0.946417;RPB=0.216819;SGB=46.0658;VDB=0.0891638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A307V|940|LOC_Os07g41200|protein_coding|CODING|LOC_Os07g41200.1|3|1) FN3435-S.SNP.7:24674166 chr07:024674166 0 W/24674166-24674166 FN3435-S SNP C -> T AC=1;AN=184;BQB=0.996399;DP=2472;DP4=1039,1379,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53856e-05;MQSB=0.969114;RPB=0.250109;SGB=30.6558;VDB=0.255821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.7:24681293 chr07:024681293 0 W/24681293-24681293 FN3629-S SNP G -> A AC=1;AN=190;BQB=0.698996;DP=3214;DP4=1455,1619,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77676e-09;MQSB=0.968374;RPB=0.977893;SGB=36.4291;VDB=0.252766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.7:24689586 chr07:024689586 0 W/24689586-24689586 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.0600102;DP=3652;DP4=2088,1521,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50712e-11;MQSB=0.995665;RPB=0.954876;SGB=-43.4892;VDB=0.565472;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.7:24692276 chr07:024692276 0 W/24692276-24692276 FN-183 Single Base Substitution T-C INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN1106-S.SNP.7:24698522 chr07:024698522 0 W/24698522-24698522 FN1106-S Single Base Substitution A-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN468-S.SNP.7:24707307 chr07:024707307 0 W/24707307-24707307 FN468-S Single Base Substitution C-T INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3418-S.SNP.7:24714739 chr07:024714739 0 W/24714739-24714739 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.890188;DP=3295;DP4=1353,1846,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.00077e-06;MQSB=0.200893;RPB=0.971074;SGB=35.7479;VDB=0.336041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L305F|525|LOC_Os07g41240|protein_coding|CODING|LOC_Os07g41240.1|1|1) FN3840-S.SNP.7:24716697 chr07:024716697 0 W/24716697-24716697 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.945473;DP=2846;DP4=1315,1449,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8526e-10;MQSB=0.887832;RPB=0.996108;SGB=76.4186;VDB=0.270255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.7:24716780 chr07:024716780 0 W/24716780-24716780 FN-144 Single Base Substitution G-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1414-S.SNP.7:24719901 chr07:024719901 0 W/24719901-24719901 FN1414-S Single Base Substitution A-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2600-S.SNP.7:24724135 chr07:024724135 0 W/24724135-24724135 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.838625;DP=4194;DP4=1902,2031,11,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000238436;MQB=3.6165e-13;MQSB=0.97818;RPB=0.0878535;SGB=55.2955;VDB=0.374062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2306.SNP.7:24724476 chr07:024724476 0 W/24724476-24724476 FN2306 SNP T -> G AC=1;AN=192;BQB=0.501068;DP=4480;DP4=2350,1553,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.00113354;MQSB=0.903147;RPB=0.259335;SGB=-15.8974;VDB=0.507997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.7:24726197 chr07:024726197 0 W/24726197-24726197 FN2617-S SNP A -> G AC=1;AN=198;BQB=0.944347;DP=4104;DP4=1938,1874,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.85612e-10;MQSB=0.694045;RPB=0.953047;SGB=10.9445;VDB=0.240122;EFF=INTRON(MODIFIER||||486|LOC_Os07g41260|protein_coding|CODING|LOC_Os07g41260.1|1|1) FN930-S.SNP.7:24734309 chr07:024734309 0 W/24734309-24734309 FN930-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g41270 retrotransposon protein, putative, unclassified, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2305.SNP.7:24735539 chr07:024735539 0 W/24735539-24735539 FN2305 SNP G -> A AC=1;AN=192;BQB=0.168243;DP=4653;DP4=2226,2167,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.73377e-05;MQSB=0.969337;RPB=0.959949;SGB=2.66176;VDB=0.856436;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.7:24736326 chr07:024736326 0 W/24736326-24736326 FN930-S Single Base Substitution C-T INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN930-S.SNP.7:24736346 chr07:024736346 0 W/24736346-24736346 FN930-S Single Base Substitution T-C INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1508-S.SNP.7:24739814 chr07:024739814 0 W/24739814-24739814 FN1508-S Single Base Substitution A-G INTRON Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN736-S.SNP.7:24742669 chr07:024742669 0 W/24742669-24742669 FN736-S Single Base Substitution G-A INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2751-S.SNP.7:24761754 chr07:024761754 0 W/24761754-24761754 FN2751-S SNP G -> T AC=1;AN=200;BQB=0.900747;DP=4916;DP4=2430,2210,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05278e-06;MQSB=0.914923;RPB=0.868597;SGB=40.4492;VDB=0.865097;EFF=INTRON(MODIFIER||||223|LOC_Os07g41330|protein_coding|CODING|LOC_Os07g41330.1|1|1) FN862-S.SNP.7:24780221 chr07:024780221 0 W/24780221-24780221 FN862-S Single Base Substitution C-T INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN-411.SNP.7:24782146 chr07:024782146 0 W/24782146-24782146 FN-411 Single Base Substitution T-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1643-S.SNP.7:24782346 chr07:024782346 0 W/24782346-24782346 FN1643-S Single Base Substitution A-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1704-S.SNP.7:24785889 chr07:024785889 0 W/24785889-24785889 FN1704-S SNP T -> C AC=2;AN=188;BQB=0.0464496;DP=3183;DP4=1897,1232,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.40075e-08;MQSB=0.933394;RPB=0.979808;SGB=-152.459;VDB=0.88312;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.7:24786351 chr07:024786351 0 W/24786351-24786351 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2374.SNP.7:24787724 chr07:024787724 0 W/24787724-24787724 FN2374 SNP C -> A AC=1;AN=192;BQB=0.0336415;DP=5147;DP4=2604,2141,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13352e-11;MQSB=0.795547;RPB=0.836722;SGB=-11.3826;VDB=0.840801;EFF=INTERGENIC(MODIFIER||||||||||1) FN-219.SNP.7:24790751 chr07:024790751 0 W/24790751-24790751 FN-219 Single Base Substitution A-G INTRON HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN3667-S.SNP.7:24810559 chr07:024810559 0 W/24810559-24810559 FN3667-S SNP T -> A AC=2;AN=190;BQB=0.900474;DP=3163;DP4=1657,1317,19,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=3.0682e-13;MQSB=0.61012;RPB=0.977792;SGB=100.07;VDB=0.596012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.7:24830382 chr07:024830382 0 W/24830382-24830382 FN2691-S SNP T -> G AC=1;AN=200;BQB=0.938401;DP=4829;DP4=2272,2318,7,17;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0;MQB=2.77008e-09;MQSB=0.944685;RPB=0.741238;SGB=76.3213;VDB=0.755686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.7:24848609 chr07:024848609 0 W/24848609-24848609 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.325045;DP=4634;DP4=2403,1972,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=0.000148792;MQSB=0.00226896;RPB=0.483965;SGB=31.3213;VDB=0.760738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.7:24848633 chr07:024848633 0 W/24848633-24848633 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.57137;DP=4570;DP4=2399,1906,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0;MQB=0.00990666;MQSB=0.608365;RPB=0.461907;SGB=13.4442;VDB=0.611614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3090-S.SNP.7:24898227 chr07:024898227 0 W/24898227-24898227 FN3090-S SNP C -> T AC=1;AN=184;BQB=0.899521;DP=2467;DP4=1263,1086,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.002172;MQSB=0.00309299;RPB=0.980331;SGB=15.7097;VDB=0.464301;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.7:24915486 chr07:024915486 0 W/24915486-24915486 FN1122-S Single Base Substitution G-T INTRON HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1027-S.SNP.7:24954636 chr07:024954636 0 W/24954636-24954636 FN1027-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g41630 expressed protein SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2196-S.SNP.7:24956842 chr07:024956842 0 W/24956842-24956842 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.87151;DP=3020;DP4=1524,1149,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.36621e-06;MQSB=1.11655e-08;RPB=0.752687;SGB=99.1879;VDB=0.717814;EFF=START_GAINED(LOW||||636|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.1|1|1),START_GAINED(LOW||||346|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.3|1|1),START_GAINED(LOW||||497|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.2|1|1),UTR_5_PRIME(MODIFIER||127||636|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.1|1|1),UTR_5_PRIME(MODIFIER||1729||346|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.3|1|1),UTR_5_PRIME(MODIFIER||1307||497|LOC_Os07g41640|protein_coding|CODING|LOC_Os07g41640.2|1|1) FN-162.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN-162 Single Base Substitution C-A INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1228-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN1228-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN1270-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN1270-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1326-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN1326-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1414-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN1414-S Single Base Substitution C-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN434-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN434-S Single Base Substitution C-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN440-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN440-S Single Base Substitution C-A INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN724-S.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN724-S Single Base Substitution C-A INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN_846-8-1.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 FN_846-8-1 Single Base Substitution C-A Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. W706-3-1.SNP.7:24982855 chr07:024982855 0 W/24982855-24982855 W706-3-1 Single Base Substitution C-A INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3453-S.SNP.7:24983272 chr07:024983272 0 W/24983272-24983272 FN3453-S SNP G -> A AC=1;AN=184;BQB=0.953628;DP=2415;DP4=1166,1164,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.0045795;MQSB=0.69662;RPB=0.160812;SGB=25.1826;VDB=0.546508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.7:24986660 chr07:024986660 0 W/24986660-24986660 FN2205-S SNP A -> G AC=2;AN=190;BQB=0.468395;DP=4940;DP4=2337,2226,28,23;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000202429;MQB=7.60833e-13;MQSB=0.420671;RPB=0.999304;SGB=115.599;VDB=0.513948;EFF=INTRON(MODIFIER||||476|LOC_Os07g41694|protein_coding|CODING|LOC_Os07g41694.1|1|1) FN2687-S.SNP.7:25003273 chr07:025003273 0 W/25003273-25003273 FN2687-S SNP A -> T AC=1;AN=200;BQB=0.673491;DP=4640;DP4=2386,2066,7,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=7.9674e-05;MQSB=0.0363517;RPB=0.161183;SGB=25.849;VDB=0.356497;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.7:25007194 chr07:025007194 0 W/25007194-25007194 FN-273 Single Base Substitution A-T INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN1669-S.SNP.7:25010996 chr07:025010996 0 W/25010996-25010996 FN1669-S SNP G -> A AC=1;AN=188;BQB=0.0235177;DP=4307;DP4=2093,2177,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000381907;MQSB=0.821655;RPB=0.954216;SGB=-34.6243;VDB=0.650373;EFF=INTRON(MODIFIER||||320|LOC_Os07g41730|protein_coding|CODING|LOC_Os07g41730.1|6|1),INTRON(MODIFIER||||342|LOC_Os07g41730|protein_coding|CODING|LOC_Os07g41730.2|6|1) W247-2-1.SNP.7:25052934 chr07:025052934 0 W/25052934-25052934 W247-2-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g41830 expressed protein SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN3615-S.SNP.7:25104379 chr07:025104379 0 W/25104379-25104379 FN3615-S SNP T -> C AC=1;AN=190;BQB=0.475123;DP=2742;DP4=1248,1373,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.76208e-07;MQSB=0.989972;RPB=0.338004;SGB=15.9981;VDB=0.261515;EFF=UTR_3_PRIME(MODIFIER||66||460|LOC_Os07g41900|protein_coding|CODING|LOC_Os07g41900.1|9|1) FN860-S.SNP.7:25105420 chr07:025105420 0 W/25105420-25105420 FN860-S Single Base Substitution A-T INTERGENIC HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN-73.SNP.7:25113487 chr07:025113487 0 W/25113487-25113487 FN-73 Single Base Substitution C-T INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2285.SNP.7:25114541 chr07:025114541 0 W/25114541-25114541 FN2285 SNP T -> G AC=2;AN=192;BQB=0.481447;DP=5170;DP4=2625,2171,22,13;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=5.45663e-13;MQSB=0.870108;RPB=0.330912;SGB=-43.6052;VDB=0.189396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.7:25122386 chr07:025122386 0 W/25122386-25122386 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.998793;DP=2807;DP4=1288,1393,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=9.27763e-12;MQSB=0.484105;RPB=0.810347;SGB=12.8895;VDB=0.177996;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.7:25218545 chr07:025218545 0 W/25218545-25218545 FN4139-S SNP C -> T AC=1;AN=170;BQB=0.858666;DP=2390;DP4=1161,1124,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.0162917;MQSB=0.0250775;RPB=0.976196;SGB=31.4354;VDB=0.107182;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.7:25218696 chr07:025218696 0 W/25218696-25218696 FN469-S Single Base Substitution T-A INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2231-S.SNP.7:25219104 chr07:025219104 0 W/25219104-25219104 FN2231-S SNP T -> C AC=1;AN=190;BQB=0.9454;DP=5125;DP4=2306,2529,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.69774e-11;MQSB=0.117858;RPB=0.999986;SGB=41.5369;VDB=0.0340666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.7:25221880 chr07:025221880 0 W/25221880-25221880 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.950576;DP=5088;DP4=2482,2271,13,9;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0;MQB=4.44464e-05;MQSB=0.947501;RPB=0.729379;SGB=69.1109;VDB=0.913908;EFF=INTRON(MODIFIER||||425|LOC_Os07g42150|protein_coding|CODING|LOC_Os07g42150.1|1|1) FN4146-S.SNP.7:25223198 chr07:025223198 0 W/25223198-25223198 FN4146-S SNP C -> A AC=1;AN=170;BQB=0.804606;DP=3009;DP4=1380,1518,11,12;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=7.69872e-11;MQSB=0.141195;RPB=0.977265;SGB=41.8678;VDB=0.0325133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.7:25226168 chr07:025226168 0 W/25226168-25226168 FN2701-S SNP T -> A AC=2;AN=200;BQB=0.458602;DP=4778;DP4=2325,2163,22,27;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.43193e-20;MQSB=0.867681;RPB=0.988933;SGB=5.65004;VDB=0.892009;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.7:25229062 chr07:025229062 0 W/25229062-25229062 FN-143 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g42160 HD domain containing protein, putative, expressed SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-411.SNP.7:25233960 chr07:025233960 0 W/25233960-25233960 FN-411 Single Base Substitution G-A INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN524-S.SNP.7:25234811 chr07:025234811 0 W/25234811-25234811 FN524-S Single Base Substitution C-G INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1288-S.SNP.7:25236545 chr07:025236545 0 W/25236545-25236545 FN1288-S Single Base Substitution A-G INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1288-S.SNP.7:25236547 chr07:025236547 0 W/25236547-25236547 FN1288-S Single Base Substitution A-G INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1723-S.SNP.7:25248299 chr07:025248299 0 W/25248299-25248299 FN1723-S SNP C -> T AC=1;AN=188;BQB=0.299895;DP=2489;DP4=854,1607,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.60361e-07;MQSB=0.604473;RPB=0.697176;SGB=-14.9998;VDB=0.0425925;EFF=UTR_3_PRIME(MODIFIER||1318||980|LOC_Os07g42180|protein_coding|CODING|LOC_Os07g42180.1|15|1) FN1723-S.SNP.7:25248300 chr07:025248300 0 W/25248300-25248300 FN1723-S SNP A -> G AC=1;AN=188;BQB=0.825638;DP=2482;DP4=851,1609,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.70485e-08;MQSB=0.517238;RPB=0.412422;SGB=35.9843;VDB=0.194222;EFF=UTR_3_PRIME(MODIFIER||1319||980|LOC_Os07g42180|protein_coding|CODING|LOC_Os07g42180.1|15|1) FN4179-S.SNP.7:25262442 chr07:025262442 0 W/25262442-25262442 FN4179-S SNP G -> A AC=2;AN=170;BQB=0.464978;DP=2694;DP4=1422,1060,22,20;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=5.48775e-11;MQSB=0.984547;RPB=0.853054;SGB=88.2781;VDB=0.615788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.7:25262617 chr07:025262617 0 W/25262617-25262617 FN1325-S Single Base Substitution C-T INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN-47.SNP.7:25262941 chr07:025262941 0 W/25262941-25262941 FN-47 Single Base Substitution C-G INTERGENIC Homo SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN1517-S.SNP.7:25276296 chr07:025276296 0 W/25276296-25276296 FN1517-S Single Base Substitution C-T INTRON HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2583-S.SNP.7:25283477 chr07:025283477 0 W/25283477-25283477 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.970499;DP=3980;DP4=1331,2283,4,19;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.157789;MQB=0.836463;MQSB=0;RPB=0.339375;SGB=17.5158;VDB=0.0142526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.7:25283948 chr07:025283948 0 W/25283948-25283948 FN1619-S Single Base Substitution C-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3465-S.SNP.7:25285065 chr07:025285065 0 W/25285065-25285065 FN3465-S SNP A -> G AC=1;AN=184;BQB=0.844381;DP=2919;DP4=1248,1575,11,20;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.62821e-10;MQSB=0.624902;RPB=0.882689;SGB=134.656;VDB=0.0526856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.7:25286094 chr07:025286094 0 W/25286094-25286094 FN3509-S SNP C -> A AC=1;AN=188;BQB=0.236255;DP=1855;DP4=833,987,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00119606;MQSB=0.898632;RPB=0.48454;SGB=26.2637;VDB=0.729686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.7:25303821 chr07:025303821 0 W/25303821-25303821 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.468191;DP=3428;DP4=1400,1953,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0;MQB=0.00405066;MQSB=0.893456;RPB=0.505626;SGB=-13.9132;VDB=0.967875;EFF=INTRON(MODIFIER||||755|LOC_Os07g42280|protein_coding|CODING|LOC_Os07g42280.1|11|1) FN3937-S.SNP.7:25307995 chr07:025307995 0 W/25307995-25307995 FN3937-S SNP G -> T AC=1;AN=158;BQB=0.884674;DP=2790;DP4=1399,1269,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.21446e-06;MQSB=0.32413;RPB=0.264956;SGB=47.0672;VDB=0.855219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.7:25312166 chr07:025312166 0 W/25312166-25312166 FN2438 SNP A -> T AC=1;AN=200;BQB=0.671791;DP=5230;DP4=2193,2593,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.8919e-11;MQSB=0.0637843;RPB=0.396259;SGB=76.3213;VDB=0.836469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.7:25312166 chr07:025312166 0 W/25312166-25312166 FN3370-S SNP A -> T AC=1;AN=184;BQB=0.998606;DP=3748;DP4=1440,2113,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.31815e-12;MQSB=0.977846;RPB=0.593244;SGB=63.9222;VDB=0.575898;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.7:25312166 chr07:025312166 0 W/25312166-25312166 FN3880-S SNP A -> T AC=1;AN=158;BQB=0.992871;DP=2989;DP4=1102,1724,9,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.83346e-13;MQSB=0.983356;RPB=0.35248;SGB=95.131;VDB=0.00418434;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.7:25312166 chr07:025312166 0 W/25312166-25312166 FN4234-S SNP A -> T AC=2;AN=170;BQB=0.532507;DP=2837;DP4=1040,1680,13,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.78089e-12;MQSB=0.842454;RPB=0.673861;SGB=110.069;VDB=0.501041;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.7:25312166 chr07:025312166 0 W/25312166-25312166 FN807-S Single Base Substitution A-T INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN446-S.SNP.7:25312896 chr07:025312896 0 W/25312896-25312896 FN446-S Single Base Substitution G-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN446-S.SNP.7:25312897 chr07:025312897 0 W/25312897-25312897 FN446-S Single Base Substitution A-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN3883-S.SNP.7:25318296 chr07:025318296 0 W/25318296-25318296 FN3883-S SNP G -> T AC=2;AN=158;BQB=0.0851038;DP=2596;DP4=1227,1234,15,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.80791e-08;MQSB=0.947534;RPB=0.627346;SGB=116.978;VDB=0.978904;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.7:25322290 chr07:025322290 0 W/25322290-25322290 FN3501-S SNP G -> A AC=2;AN=188;BQB=0.89936;DP=2736;DP4=1234,1389,7,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.31894e-11;MQSB=0.59692;RPB=0.978797;SGB=76.2387;VDB=0.27561;EFF=INTRON(MODIFIER||||534|LOC_Os07g42310|protein_coding|CODING|LOC_Os07g42310.1|3|1) FN2377.SNP.7:25324595 chr07:025324595 0 W/25324595-25324595 FN2377 SNP A -> G AC=1;AN=192;BQB=0.607811;DP=4681;DP4=2312,2015,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.11276e-11;MQSB=0.531911;RPB=0.518916;SGB=103.983;VDB=0.756795;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.7:25326040 chr07:025326040 0 W/25326040-25326040 FN858-S Single Base Substitution A-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2386.SNP.7:25331098 chr07:025331098 0 W/25331098-25331098 FN2386 SNP C -> T AC=1;AN=192;BQB=0.719981;DP=4771;DP4=2206,2294,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.0002096;MQB=1.03724e-12;MQSB=0.0181362;RPB=0.694951;SGB=117.676;VDB=0.886987;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.7:25331356 chr07:025331356 0 W/25331356-25331356 FN3595-S SNP G -> T AC=1;AN=190;BQB=0.976049;DP=2902;DP4=1392,1411,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.31653e-07;MQSB=0.3409;RPB=0.465766;SGB=53.6492;VDB=0.563312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.7:25331412 chr07:025331412 0 W/25331412-25331412 FN3866-S SNP C -> T AC=2;AN=158;BQB=0.977082;DP=2423;DP4=1240,1087,10,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.34483e-13;MQSB=0.583158;RPB=0.317419;SGB=86.3921;VDB=0.691204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.7:25331415 chr07:025331415 0 W/25331415-25331415 FN3866-S SNP C -> T AC=2;AN=158;BQB=0.466369;DP=2443;DP4=1270,1090,11,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.8248e-14;MQSB=0.474244;RPB=0.115244;SGB=64.3985;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.7:25331729 chr07:025331729 0 W/25331729-25331729 FN3324-S SNP A -> G AC=1;AN=184;BQB=0.7341;DP=3205;DP4=1709,1376,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.34951e-09;MQSB=0.998438;RPB=0.905156;SGB=-14.714;VDB=0.647356;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.7:25332014 chr07:025332014 0 W/25332014-25332014 FN427-S Single Base Substitution A-T INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3902-S.SNP.7:25354158 chr07:025354158 0 W/25354158-25354158 FN3902-S SNP G -> A AC=1;AN=158;BQB=0.597059;DP=3224;DP4=1447,1500,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.96456e-06;MQSB=0.983462;RPB=0.517617;SGB=3.4556;VDB=0.435229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3866-S.SNP.7:25355968 chr07:025355968 0 W/25355968-25355968 FN3866-S SNP A -> G AC=2;AN=158;BQB=0.256106;DP=2280;DP4=1341,860,12,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.81985e-08;MQSB=0.966516;RPB=0.904348;SGB=50.9207;VDB=0.886472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.7:25357029 chr07:025357029 0 W/25357029-25357029 FN3867-S SNP A -> G AC=1;AN=158;BQB=0.850179;DP=2544;DP4=1129,1331,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.31008e-08;MQSB=0.917541;RPB=0.777933;SGB=44.1818;VDB=0.134516;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.7:25364323 chr07:025364323 0 W/25364323-25364323 FN705-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN4235-S.SNP.7:25364947 chr07:025364947 0 W/25364947-25364947 FN4235-S SNP A -> T AC=1;AN=170;BQB=0.722429;DP=2393;DP4=1412,881,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.80698e-07;MQSB=0.989002;RPB=0.0118056;SGB=38.987;VDB=0.00611187;EFF=INTRON(MODIFIER||||76|LOC_Os07g42390|protein_coding|CODING|LOC_Os07g42390.2|1|1) FN4235-S.SNP.7:25364948 chr07:025364948 0 W/25364948-25364948 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.671575;DP=2389;DP4=1420,899,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.81342e-07;MQSB=0.880033;RPB=0.00991944;SGB=38.987;VDB=0.00553885;EFF=INTRON(MODIFIER||||76|LOC_Os07g42390|protein_coding|CODING|LOC_Os07g42390.2|1|1) FN3926-S.SNP.7:25369084 chr07:025369084 0 W/25369084-25369084 FN3926-S SNP G -> A AC=1;AN=158;BQB=0.999531;DP=2029;DP4=1059,838,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.53564e-10;MQSB=0.958274;RPB=0.497286;SGB=68.9144;VDB=0.868757;EFF=INTERGENIC(MODIFIER||||||||||1) FN317-S.SNP.7:25374726 chr07:025374726 0 W/25374726-25374726 FN317-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g42400 transposon protein, putative, unclassified, expressed SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN819-S.SNP.7:25376534 chr07:025376534 0 W/25376534-25376534 FN819-S Single Base Substitution T-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2219-S.SNP.7:25388916 chr07:025388916 0 W/25388916-25388916 FN2219-S SNP A -> C AC=2;AN=190;BQB=0.933963;DP=4883;DP4=1981,2531,19,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.01087e-17;MQSB=0.301219;RPB=0.190081;SGB=103.624;VDB=0.266837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K1344Q|1365|LOC_Os07g42410|protein_coding|CODING|LOC_Os07g42410.1|9|1) FN4074-S.SNP.7:25389531 chr07:025389531 0 W/25389531-25389531 FN4074-S SNP C -> T AC=1;AN=182;BQB=0.979416;DP=2877;DP4=1546,1264,11,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.2177e-08;MQSB=0.88359;RPB=0.165739;SGB=53.1331;VDB=0.646037;EFF=UTR_3_PRIME(MODIFIER||406||1365|LOC_Os07g42410|protein_coding|CODING|LOC_Os07g42410.1|10|1) FN853-S.SNP.7:25398836 chr07:025398836 0 W/25398836-25398836 FN853-S Single Base Substitution T-A INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3442-S.SNP.7:25402485 chr07:025402485 0 W/25402485-25402485 FN3442-S SNP G -> T AC=2;AN=184;BQB=0.992558;DP=1305;DP4=1195,68,11,0;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.40242e-07;MQSB=0.891967;RPB=0.520464;SGB=28.7043;VDB=0.159794;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.7:25407199 chr07:025407199 0 W/25407199-25407199 FN447-S Single Base Substitution C-A INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2210-S.SNP.7:25427712 chr07:025427712 0 W/25427712-25427712 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.976528;DP=4028;DP4=1985,1769,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000197854;MQSB=0.907906;RPB=0.992663;SGB=10.8904;VDB=0.318572;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.7:25429851 chr07:025429851 0 W/25429851-25429851 FN4087-S SNP C -> T AC=2;AN=182;BQB=0.943578;DP=3108;DP4=1354,1674,5,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.01033e-07;MQSB=0.978932;RPB=0.837576;SGB=44.1115;VDB=0.0720987;EFF=INTRON(MODIFIER||||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.1|1|1),INTRON(MODIFIER||||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.2|1|1) FN2288.SNP.7:25430220 chr07:025430220 0 W/25430220-25430220 FN2288 SNP T -> G AC=1;AN=192;BQB=0.864159;DP=5035;DP4=2530,2267,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.63239e-09;MQSB=0.932559;RPB=0.315309;SGB=10.4835;VDB=0.536154;EFF=INTRON(MODIFIER||||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.1|1|1),INTRON(MODIFIER||||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.2|1|1) FN735-S.SNP.7:25432444 chr07:025432444 0 W/25432444-25432444 FN735-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os07g42490 sucrose synthase, putative, expressed SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2107-S.SNP.7:25435059 chr07:025435059 0 W/25435059-25435059 FN2107-S SNP A -> G AC=1;AN=168;BQB=0.187236;DP=3209;DP4=1338,1843,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.56445e-05;MQSB=0.533947;RPB=0.972468;SGB=-36.0898;VDB=0.663763;EFF=UTR_3_PRIME(MODIFIER||155||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.2|16|1),UTR_3_PRIME(MODIFIER||155||816|LOC_Os07g42490|protein_coding|CODING|LOC_Os07g42490.1|16|1) FN2353.SNP.7:25436350 chr07:025436350 0 W/25436350-25436350 FN2353 SNP G -> T AC=1;AN=192;BQB=0.428801;DP=4817;DP4=2175,2267,8,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000207598;MQB=1.52394e-10;MQSB=0.0048622;RPB=0.178198;SGB=-95.9313;VDB=0.705562;EFF=INTRON(MODIFIER||||462|LOC_Os07g42500|protein_coding|CODING|LOC_Os07g42500.1|1|1) FN-392.SNP.7:25440270 chr07:025440270 0 W/25440270-25440270 FN-392 Single Base Substitution C-A INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN1038-S.SNP.7:25440510 chr07:025440510 0 W/25440510-25440510 FN1038-S Single Base Substitution C-T INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN-287.SNP.7:25442415 chr07:025442415 0 W/25442415-25442415 FN-287 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN796-S.SNP.7:25445365 chr07:025445365 0 W/25445365-25445365 FN796-S Single Base Substitution C-G INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN796-S.SNP.7:25445368 chr07:025445368 0 W/25445368-25445368 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN-335.SNP.7:25446474 chr07:025446474 0 W/25446474-25446474 FN-335 Single Base Substitution A-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2581-S.SNP.7:25447579 chr07:025447579 0 W/25447579-25447579 FN2581-S SNP C -> G AC=1;AN=198;BQB=0.812857;DP=4747;DP4=2408,2104,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000210659;MQB=1.20711e-09;MQSB=0.97827;RPB=0.841894;SGB=50.9344;VDB=0.13644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.7:25461510 chr07:025461510 0 W/25461510-25461510 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.197766;DP=5383;DP4=2656,2297,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0360394;MQB=0.141722;MQSB=0;RPB=0.830035;SGB=14.9883;VDB=0.971164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.7:25468974 chr07:025468974 0 W/25468974-25468974 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.825554;DP=2584;DP4=1252,1212,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.69946e-08;MQSB=0.95203;RPB=0.518439;SGB=53.2642;VDB=0.399769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.7:25471491 chr07:025471491 0 W/25471491-25471491 FN3886-S SNP T -> G AC=1;AN=158;BQB=0.898561;DP=2322;DP4=1196,1045,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.65719e-06;MQSB=0.992337;RPB=0.524307;SGB=-2.02218;VDB=0.263711;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.7:25475125 chr07:025475125 0 W/25475125-25475125 FN4188-S SNP G -> A AC=1;AN=170;BQB=0.461993;DP=2600;DP4=1287,1222,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0918e-08;MQSB=0.986719;RPB=0.919105;SGB=5.77511;VDB=0.915175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.7:25481770 chr07:025481770 0 W/25481770-25481770 FN2719-S SNP T -> A AC=2;AN=200;BQB=0.621808;DP=4775;DP4=2541,2071,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.7107e-23;MQSB=0.838946;RPB=0.989951;SGB=48.014;VDB=0.0176774;EFF=INTERGENIC(MODIFIER||||||||||1) FN3286-S.SNP.7:25481770 chr07:025481770 0 W/25481770-25481770 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.91678;DP=3063;DP4=1552,1413,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30436e-10;MQSB=0.999805;RPB=0.437488;SGB=9.8459;VDB=0.190034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.7:25482312 chr07:025482312 0 W/25482312-25482312 FN2112-S SNP A -> T AC=1;AN=168;BQB=0.187491;DP=3762;DP4=1713,1983,19,29;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.62736e-15;MQSB=0.977541;RPB=0.578253;SGB=-474.272;VDB=0.295169;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.7:25482312 chr07:025482312 0 W/25482312-25482312 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.370997;DP=5391;DP4=2422,2682,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.28387e-08;MQSB=0.984066;RPB=0.328716;SGB=-10.6896;VDB=0.0954373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.7:25482364 chr07:025482364 0 W/25482364-25482364 FN2486 SNP G -> A AC=1;AN=200;BQB=0.684272;DP=5278;DP4=2197,2349,21,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.27254e-21;MQSB=0.852502;RPB=0.913947;SGB=39.9882;VDB=0.303257;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.7:25482845 chr07:025482845 0 W/25482845-25482845 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.6536;DP=2511;DP4=996,1401,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.43647e-07;MQSB=0.422952;RPB=0.946899;SGB=48.6486;VDB=0.934958;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.7:25483971 chr07:025483971 0 W/25483971-25483971 FN2134-S SNP A -> G AC=1;AN=168;BQB=0.890843;DP=2920;DP4=1613,1256,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.90161e-14;MQSB=0.970696;RPB=0.99561;SGB=48.9237;VDB=0.764421;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.7:25485911 chr07:025485911 0 W/25485911-25485911 FN891-S Single Base Substitution G-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN503-S.SNP.7:25487308 chr07:025487308 0 W/25487308-25487308 FN503-S Single Base Substitution T-A INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2637-S.SNP.7:25489346 chr07:025489346 0 W/25489346-25489346 FN2637-S SNP G -> T AC=2;AN=200;BQB=0.782911;DP=4507;DP4=2005,2072,18,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.78059e-21;MQSB=0.962353;RPB=0.516974;SGB=192.42;VDB=0.301396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E278D|406|LOC_Os07g42590|protein_coding|CODING|LOC_Os07g42590.1|1|1) FN-89.SNP.7:25497657 chr07:025497657 0 W/25497657-25497657 FN-89 Single Base Substitution T-A INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-36.SNP.7:25498437 chr07:025498437 0 W/25498437-25498437 FN-36 Single Base Substitution C-A INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN-36.SNP.7:25498438 chr07:025498438 0 W/25498438-25498438 FN-36 Single Base Substitution C-A INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN3562-S.SNP.7:25499808 chr07:025499808 0 W/25499808-25499808 FN3562-S SNP T -> A AC=1;AN=188;BQB=0.962606;DP=2943;DP4=1496,1309,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.50171e-13;MQSB=0.869154;RPB=0.815277;SGB=85.3253;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.7:25499809 chr07:025499809 0 W/25499809-25499809 FN3562-S SNP T -> A AC=1;AN=188;BQB=0.952589;DP=2939;DP4=1494,1293,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.01674e-14;MQSB=0.828245;RPB=0.509562;SGB=94.4119;VDB=0.638855;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.7:25506878 chr07:025506878 0 W/25506878-25506878 FN584-S Single Base Substitution T-A INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2655-S.SNP.7:25506971 chr07:025506971 0 W/25506971-25506971 FN2655-S SNP T -> C AC=1;AN=200;BQB=0.714873;DP=5358;DP4=3067,2005,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.42379e-13;MQSB=0.989877;RPB=0.999917;SGB=37.3004;VDB=0.157088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.7:25510630 chr07:025510630 0 W/25510630-25510630 FN2499 SNP G -> C AC=1;AN=200;BQB=0.719324;DP=4734;DP4=2079,2397,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.24592e-05;MQSB=0.942821;RPB=0.624134;SGB=22.2439;VDB=0.0731931;EFF=INTRON(MODIFIER||||113|LOC_Os07g42620|protein_coding|CODING|LOC_Os07g42620.1|1|1) FN1234-S.SNP.7:25514018 chr07:025514018 0 W/25514018-25514018 FN1234-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN537-S.SNP.7:25515849 chr07:025515849 0 W/25515849-25515849 FN537-S Single Base Substitution G-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN2500.SNP.7:25518323 chr07:025518323 0 W/25518323-25518323 FN2500 SNP T -> C AC=1;AN=200;BQB=0.480333;DP=4183;DP4=1986,1645,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.89276e-08;MQSB=0.537777;RPB=0.998822;SGB=32.0901;VDB=0.870977;EFF=UTR_5_PRIME(MODIFIER||374||683|LOC_Os07g42626|protein_coding|CODING|LOC_Os07g42626.3|1|1),UTR_5_PRIME(MODIFIER||248||693|LOC_Os07g42626|protein_coding|CODING|LOC_Os07g42626.2|1|1),INTRON(MODIFIER||||732|LOC_Os07g42626|protein_coding|CODING|LOC_Os07g42626.1|1|1) FN430-S.SNP.7:25521580 chr07:025521580 0 W/25521580-25521580 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g42626 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN797-S.SNP.7:25526074 chr07:025526074 0 W/25526074-25526074 FN797-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN705-S.SNP.7:25532632 chr07:025532632 0 W/25532632-25532632 FN705-S Single Base Substitution T-G INTRON HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN4253-S.SNP.7:25543230 chr07:025543230 0 W/25543230-25543230 FN4253-S SNP G -> A AC=1;AN=170;BQB=0.780253;DP=2457;DP4=1236,1121,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.08066e-05;MQSB=0.999585;RPB=0.49995;SGB=31.4354;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.7:25544255 chr07:025544255 0 W/25544255-25544255 FN3430-S SNP G -> A AC=1;AN=184;BQB=0.72714;DP=3582;DP4=1216,2254,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.35848e-06;MQSB=0.976137;RPB=0.802453;SGB=53.2642;VDB=0.92;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.7:25544614 chr07:025544614 0 W/25544614-25544614 FN1484-S Single Base Substitution T-C INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN960-S.SNP.7:25544766 chr07:025544766 0 W/25544766-25544766 FN960-S Single Base Substitution A-T INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1541-S.SNP.7:25545636 chr07:025545636 0 W/25545636-25545636 FN1541-S Single Base Substitution G-A INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN185-2_3_4.SNP.7:25545724 chr07:025545724 0 W/25545724-25545724 FN185-2_3_4 SNP G -> T AC=2;AN=188;BQB=0.860356;DP=3749;DP4=1794,1895,19,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.33125e-17;MQSB=0.999945;RPB=0.889909;SGB=-1.96068;VDB=0.808542;EFF=INTERGENIC(MODIFIER||||||||||1) FN458-S.SNP.7:25551473 chr07:025551473 0 W/25551473-25551473 FN458-S Single Base Substitution G-T INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN-144.SNP.7:25552703 chr07:025552703 0 W/25552703-25552703 FN-144 Single Base Substitution G-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN401-S.SNP.7:25553258 chr07:025553258 0 W/25553258-25553258 FN401-S Single Base Substitution C-T INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN432-S.SNP.7:25554584 chr07:025554584 0 W/25554584-25554584 FN432-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3815-S.SNP.7:25561729 chr07:025561729 0 W/25561729-25561729 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.891343;DP=3112;DP4=1268,1707,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000321337;MQB=2.33323e-06;MQSB=0.0666296;RPB=0.636891;SGB=39.9877;VDB=0.251186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.7:25567127 chr07:025567127 0 W/25567127-25567127 FN2357 SNP G -> A AC=2;AN=192;BQB=0.995072;DP=4967;DP4=2357,2301,20,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.37523e-29;MQSB=0.549648;RPB=0.738242;SGB=182.354;VDB=0.287781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S655N|788|LOC_Os07g42700|protein_coding|CODING|LOC_Os07g42700.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S642N|775|LOC_Os07g42700|protein_coding|CODING|LOC_Os07g42700.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S614N|747|LOC_Os07g42700|protein_coding|CODING|LOC_Os07g42700.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S684N|817|LOC_Os07g42700|protein_coding|CODING|LOC_Os07g42700.1|3|1) FN505-S.SNP.7:25572536 chr07:025572536 0 W/25572536-25572536 FN505-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN961-S.SNP.7:25584515 chr07:025584515 0 W/25584515-25584515 FN961-S Single Base Substitution G-A INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN961-S.SNP.7:25584516 chr07:025584516 0 W/25584516-25584516 FN961-S Single Base Substitution G-A INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3525-S.SNP.7:25602173 chr07:025602173 0 W/25602173-25602173 FN3525-S SNP T -> A AC=1;AN=188;BQB=0.767492;DP=3320;DP4=1085,2090,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67359e-06;MQSB=0.995562;RPB=0.496271;SGB=21.8113;VDB=0.118298;EFF=INTRON(MODIFIER||||359|LOC_Os07g42750|protein_coding|CODING|LOC_Os07g42750.1|1|1),INTRON(MODIFIER||||330|LOC_Os07g42750|protein_coding|CODING|LOC_Os07g42750.2|1|1) FN3443-S.SNP.7:25603809 chr07:025603809 0 W/25603809-25603809 FN3443-S SNP A -> T AC=2;AN=184;BQB=0.877817;DP=2708;DP4=1276,1342,10,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.60517e-11;MQSB=0.990541;RPB=0.893313;SGB=89.4385;VDB=0.930329;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I67L|359|LOC_Os07g42750|protein_coding|CODING|LOC_Os07g42750.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I67L|330|LOC_Os07g42750|protein_coding|CODING|LOC_Os07g42750.2|5|1) FN491-S.SNP.7:25614728 chr07:025614728 0 W/25614728-25614728 FN491-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN710-S.SNP.7:25618121 chr07:025618121 0 W/25618121-25618121 FN710-S Single Base Substitution T-A INTRON HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN1122-S.SNP.7:25622763 chr07:025622763 0 W/25622763-25622763 FN1122-S Single Base Substitution T-A INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1122-S.SNP.7:25624655 chr07:025624655 0 W/25624655-25624655 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2231-S.SNP.7:25632477 chr07:025632477 0 W/25632477-25632477 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.999217;DP=4309;DP4=1793,2226,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.92389e-06;MQSB=0.986841;RPB=0.0268685;SGB=28.9929;VDB=0.108259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.7:25637548 chr07:025637548 0 W/25637548-25637548 FN3064-S SNP T -> C AC=1;AN=184;BQB=0.998078;DP=3496;DP4=1482,1895,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.90476e-07;MQSB=0.980787;RPB=0.0936143;SGB=53.2642;VDB=0.67854;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N258|396|LOC_Os07g42800|protein_coding|CODING|LOC_Os07g42800.1|1|1) FN1481-S.SNP.7:25639784 chr07:025639784 0 W/25639784-25639784 FN1481-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN2622-S.SNP.7:25639891 chr07:025639891 0 W/25639891-25639891 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.74824;DP=5119;DP4=2645,2240,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.03107e-15;MQSB=0.990646;RPB=0.0789265;SGB=60.747;VDB=0.492063;EFF=UTR_3_PRIME(MODIFIER||1926||396|LOC_Os07g42800|protein_coding|CODING|LOC_Os07g42800.1|2|1) FN1220-S.SNP.7:25640384 chr07:025640384 0 W/25640384-25640384 FN1220-S Single Base Substitution A-G INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1559-S.SNP.7:25649053 chr07:025649053 0 W/25649053-25649053 FN1559-S Single Base Substitution C-A UTR_5_PRIME Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN681-S.SNP.7:25655466 chr07:025655466 0 W/25655466-25655466 FN681-S Single Base Substitution G-A INTRON HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3507-S.SNP.7:25656164 chr07:025656164 0 W/25656164-25656164 FN3507-S SNP C -> T AC=1;AN=188;BQB=0.955856;DP=3039;DP4=1473,1501,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00855545;MQB=6.18765e-08;MQSB=0.762219;RPB=0.992056;SGB=76.2387;VDB=0.321502;EFF=INTRON(MODIFIER||||656|LOC_Os07g42834|protein_coding|CODING|LOC_Os07g42834.1|1|1) FN1250-S.SNP.7:25676464 chr07:025676464 0 W/25676464-25676464 FN1250-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g42885 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1566-S.SNP.7:25677377 chr07:025677377 0 W/25677377-25677377 FN1566-S Single Base Substitution T-A INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. W385-6-8-4.SNP.7:25677377 chr07:025677377 0 W/25677377-25677377 W385-6-8-4 Single Base Substitution T-A INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN-181.SNP.7:25680276 chr07:025680276 0 W/25680276-25680276 FN-181 Single Base Substitution A-C INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3694-S.SNP.7:25686086 chr07:025686086 0 W/25686086-25686086 FN3694-S SNP T -> A AC=1;AN=190;BQB=0.974588;DP=2935;DP4=1439,1404,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.42611e-07;MQSB=0.832079;RPB=0.777464;SGB=25.439;VDB=0.696714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y610F|1254|LOC_Os07g42900|protein_coding|CODING|LOC_Os07g42900.1|1|1) FN2263-S.SNP.7:25695020 chr07:025695020 0 W/25695020-25695020 FN2263-S SNP T -> C AC=2;AN=190;BQB=0.824404;DP=4217;DP4=1652,2045,33,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.69798e-30;MQSB=0.128796;RPB=0.550844;SGB=227.596;VDB=0.589161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.7:25695020 chr07:025695020 0 W/25695020-25695020 FN2390 SNP T -> C AC=2;AN=200;BQB=0.966806;DP=4200;DP4=1657,2067,13,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000238095;MQB=1.27789e-17;MQSB=0.716887;RPB=0.998063;SGB=-82.0227;VDB=0.24541;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.7:25697288 chr07:025697288 0 W/25697288-25697288 FN2483 SNP A -> G AC=1;AN=200;BQB=0.614626;DP=5070;DP4=2182,2544,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.61328e-07;MQSB=0.78539;RPB=0.951706;SGB=36.6644;VDB=0.229076;EFF=INTRON(MODIFIER||||390|LOC_Os07g42924|protein_coding|CODING|LOC_Os07g42924.1|8|1) FN1648-S.SNP.7:25699003 chr07:025699003 0 W/25699003-25699003 FN1648-S Single Base Substitution T-A UTR_3_PRIME Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN1096-S.SNP.7:25699947 chr07:025699947 0 W/25699947-25699947 FN1096-S Single Base Substitution G-C INTRON HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN-8.SNP.7:25702314 chr07:025702314 0 W/25702314-25702314 FN-8 Single Base Substitution G-A INTRON Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN3785-S.SNP.7:25702314 chr07:025702314 0 W/25702314-25702314 FN3785-S SNP G -> A AC=2;AN=190;BQB=0.999793;DP=2187;DP4=1208,891,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.09076e-12;MQSB=0.817681;RPB=0.995303;SGB=80.9724;VDB=0.653326;EFF=INTRON(MODIFIER||||390|LOC_Os07g42924|protein_coding|CODING|LOC_Os07g42924.1|3|1),INTRON(MODIFIER||||319|LOC_Os07g42924|protein_coding|CODING|LOC_Os07g42924.2|3|1),INTRON(MODIFIER||||216|LOC_Os07g42924|protein_coding|CODING|LOC_Os07g42924.3|3|1) FN2617-S.SNP.7:25706475 chr07:025706475 0 W/25706475-25706475 FN2617-S SNP C -> A AC=1;AN=198;BQB=0.477032;DP=4362;DP4=2219,1862,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.30453e-16;MQSB=0.943513;RPB=0.914626;SGB=55.2955;VDB=0.406209;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.7:25709391 chr07:025709391 0 W/25709391-25709391 FN684-S Single Base Substitution C-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1079-S.SNP.7:25713176 chr07:025713176 0 W/25713176-25713176 FN1079-S Single Base Substitution C-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN714-S.SNP.7:25715324 chr07:025715324 0 W/25715324-25715324 FN714-S Single Base Substitution G-A INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN714-S.SNP.7:25715325 chr07:025715325 0 W/25715325-25715325 FN714-S Single Base Substitution A-T INTERGENIC HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2438.SNP.7:25717066 chr07:025717066 0 W/25717066-25717066 FN2438 SNP G -> A AC=1;AN=200;BQB=0.478151;DP=4840;DP4=2599,1893,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.88167e-07;MQSB=0.997131;RPB=0.341858;SGB=58.2954;VDB=0.385327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.7:25722316 chr07:025722316 0 W/25722316-25722316 FN2418 SNP A -> C AC=1;AN=200;BQB=0.801975;DP=4937;DP4=2332,2391,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4178e-08;MQSB=0.792222;RPB=0.999977;SGB=24.2746;VDB=0.664635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.7:25739644 chr07:025739644 0 W/25739644-25739644 FN2375 SNP C -> T AC=1;AN=192;BQB=0.587614;DP=4969;DP4=2379,2351,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.83168e-09;MQSB=0.986646;RPB=0.990129;SGB=7.3548;VDB=0.5004;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.7:25751570 chr07:025751570 0 W/25751570-25751570 FN978-S Single Base Substitution G-A INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2125-S.SNP.7:25757361 chr07:025757361 0 W/25757361-25757361 FN2125-S SNP C -> G AC=1;AN=168;BQB=0.506407;DP=2593;DP4=903,1651,3,10;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00192827;MQB=0.717063;MQSB=0.477135;RPB=0.312692;SGB=34.748;VDB=0.235209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.7:25760216 chr07:025760216 0 W/25760216-25760216 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2309.SNP.7:25769956 chr07:025769956 0 W/25769956-25769956 FN2309 SNP C -> T AC=1;AN=192;BQB=0.82419;DP=4782;DP4=2239,2274,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.90519e-08;MQSB=0.857522;RPB=0.899322;SGB=-14.2043;VDB=0.651817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.7:25786165 chr07:025786165 0 W/25786165-25786165 FN2269-S SNP A -> G AC=2;AN=190;BQB=0.449754;DP=5074;DP4=2417,2277,26,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.29948e-33;MQSB=0.977055;RPB=0.260502;SGB=70.9278;VDB=0.00051358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.7:25789836 chr07:025789836 0 W/25789836-25789836 FN3911-S SNP C -> A AC=1;AN=158;BQB=0.736318;DP=1958;DP4=926,953,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.82546e-05;MQSB=0.762979;RPB=0.997426;SGB=38.3284;VDB=0.148491;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.7:25797079 chr07:025797079 0 W/25797079-25797079 FN959-S Single Base Substitution C-G UTR_3_PRIME HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN4101-S.SNP.7:25799362 chr07:025799362 0 W/25799362-25799362 FN4101-S SNP G -> A AC=2;AN=182;BQB=0.954573;DP=2991;DP4=1552,1340,15,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.98788e-16;MQSB=0.983585;RPB=0.999506;SGB=91.8015;VDB=0.786792;EFF=INTRON(MODIFIER||||146|LOC_Os07g43060|protein_coding|CODING|LOC_Os07g43060.1|3|1),INTRON(MODIFIER||||131|LOC_Os07g43060|protein_coding|CODING|LOC_Os07g43060.2|3|1) W475-4-2.SNP.7:25799362 chr07:025799362 0 W/25799362-25799362 W475-4-2 Single Base Substitution G-A INTRON HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3856-S.SNP.7:25800684 chr07:025800684 0 W/25800684-25800684 FN3856-S SNP T -> A AC=1;AN=158;BQB=0.955925;DP=2014;DP4=940,857,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33085e-06;MQSB=0.969679;RPB=0.931483;SGB=14.3409;VDB=0.593729;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D11V|146|LOC_Os07g43060|protein_coding|CODING|LOC_Os07g43060.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D11V|131|LOC_Os07g43060|protein_coding|CODING|LOC_Os07g43060.2|1|1) FN3843-S.SNP.7:25820917 chr07:025820917 0 W/25820917-25820917 FN3843-S SNP G -> T AC=1;AN=190;BQB=0.998089;DP=3218;DP4=1618,1518,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49821e-13;MQSB=0.922735;RPB=0.876614;SGB=64.5316;VDB=0.643149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.7:25820931 chr07:025820931 0 W/25820931-25820931 FN3843-S SNP G -> A AC=1;AN=190;BQB=0.966602;DP=3137;DP4=1601,1426,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32513e-13;MQSB=0.949256;RPB=0.886307;SGB=64.5316;VDB=0.798093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.7:25820932 chr07:025820932 0 W/25820932-25820932 FN3843-S SNP C -> A AC=1;AN=190;BQB=0.986111;DP=3123;DP4=1605,1415,6,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.0825e-14;MQSB=0.946849;RPB=0.935491;SGB=68.0854;VDB=0.751997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.7:25823855 chr07:025823855 0 W/25823855-25823855 FN3399-S SNP C -> T AC=2;AN=184;BQB=0.964438;DP=3382;DP4=1640,1642,20,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000887049;MQB=2.80809e-22;MQSB=0.980605;RPB=0.721887;SGB=123.793;VDB=0.0246162;EFF=INTRON(MODIFIER||||1348|LOC_Os07g43090|protein_coding|CODING|LOC_Os07g43090.1|3|1) FN2646-S.SNP.7:25826260 chr07:025826260 0 W/25826260-25826260 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.907109;DP=4570;DP4=2084,2274,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03507e-10;MQSB=0.776602;RPB=0.242639;SGB=58.2954;VDB=0.555883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.7:25828854 chr07:025828854 0 W/25828854-25828854 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.946666;DP=4120;DP4=1820,2045,19,17;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0118932;MQB=0.958641;MQSB=0.13811;RPB=0.829974;SGB=119.242;VDB=0.687288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.7:25836983 chr07:025836983 0 W/25836983-25836983 FN2439 SNP G -> A AC=1;AN=200;BQB=0.562148;DP=4428;DP4=1834,2204,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000121321;MQSB=0.999755;RPB=0.309895;SGB=22.2439;VDB=0.830889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.7:25839045 chr07:025839045 0 W/25839045-25839045 FN1385-S Single Base Substitution A-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN622-S.SNP.7:25839386 chr07:025839386 0 W/25839386-25839386 FN622-S Single Base Substitution T-A INTERGENIC HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN1321-S.SNP.7:25839402 chr07:025839402 0 W/25839402-25839402 FN1321-S Single Base Substitution G-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2218-S.SNP.7:25844572 chr07:025844572 0 W/25844572-25844572 FN2218-S SNP A -> T AC=1;AN=190;BQB=0.27391;DP=3960;DP4=2468,1238,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93939e-12;MQSB=0.878462;RPB=0.998584;SGB=41.5369;VDB=0.613358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.7:25851212 chr07:025851212 0 W/25851212-25851212 FN1150-S Single Base Substitution C-A INTRON HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. W591-4-1.SNP.7:25857040 chr07:025857040 0 W/25857040-25857040 W591-4-1 Single Base Substitution C-T INTERGENIC HET SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN2472.SNP.7:25860678 chr07:025860678 0 W/25860678-25860678 FN2472 SNP G -> A AC=1;AN=200;BQB=0.997044;DP=4372;DP4=2086,1987,20,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000228728;MQB=9.52988e-18;MQSB=0.894707;RPB=0.900567;SGB=127.947;VDB=0.448095;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.7:25862254 chr07:025862254 0 W/25862254-25862254 FN1551-S Single Base Substitution T-A INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1376-S.SNP.7:25866939 chr07:025866939 0 W/25866939-25866939 FN1376-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN4325-S.SNP.7:25870686 chr07:025870686 0 W/25870686-25870686 FN4325-S SNP A -> C AC=2;AN=170;BQB=0.941964;DP=2627;DP4=1209,1291,17,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.67423e-18;MQSB=0.999455;RPB=0.906675;SGB=71.1796;VDB=0.636271;EFF=INTRON(MODIFIER||||366|LOC_Os07g43160|protein_coding|CODING|LOC_Os07g43160.1|10|1) FN-74.SNP.7:25874499 chr07:025874499 0 W/25874499-25874499 FN-74 Single Base Substitution T-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1745-S.SNP.7:25876419 chr07:025876419 0 W/25876419-25876419 FN1745-S SNP C -> A AC=1;AN=188;BQB=0.200988;DP=3108;DP4=1498,1575,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02942e-07;MQSB=0.982534;RPB=0.412825;SGB=-91.3539;VDB=0.476737;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.7:25878110 chr07:025878110 0 W/25878110-25878110 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3530-S.SNP.7:25880489 chr07:025880489 0 W/25880489-25880489 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.990292;DP=2731;DP4=1271,1393,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.28559e-14;MQSB=0.818838;RPB=0.950318;SGB=94.4119;VDB=0.509735;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P120|300|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P84|211|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P84|210|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.3|5|1) FN1690-S.SNP.7:25880579 chr07:025880579 0 W/25880579-25880579 FN1690-S SNP G -> A AC=1;AN=188;BQB=0.659563;DP=4084;DP4=2217,1834,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.31876e-08;MQSB=0.971921;RPB=0.548481;SGB=10.1681;VDB=0.266315;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S90|300|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.1|4|1),INTRON(MODIFIER||||211|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.2|4|1),INTRON(MODIFIER||||210|LOC_Os07g43170|protein_coding|CODING|LOC_Os07g43170.3|4|1) FN3937-S.SNP.7:25889590 chr07:025889590 0 W/25889590-25889590 FN3937-S SNP G -> T AC=1;AN=158;BQB=0.970972;DP=3215;DP4=1564,1537,6,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.41218e-10;MQSB=0.983421;RPB=0.887123;SGB=82.0227;VDB=0.824688;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R493|1578|LOC_Os07g43200|protein_coding|CODING|LOC_Os07g43200.1|3|1) FN1424-S.SNP.7:25892024 chr07:025892024 0 W/25892024-25892024 FN1424-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g43200 retrotransposon protein, putative, LINE subclass, expressed SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3510-S.SNP.7:25894074 chr07:025894074 0 W/25894074-25894074 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.393543;DP=2882;DP4=1185,1563,8,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00138793;MQB=2.44923e-09;MQSB=0.856946;RPB=0.969296;SGB=13.2547;VDB=0.9974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.7:25896922 chr07:025896922 0 W/25896922-25896922 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1413-S.SNP.7:25896923 chr07:025896923 0 W/25896923-25896923 FN1413-S Single Base Substitution C-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-381.SNP.7:25900313 chr07:025900313 0 W/25900313-25900313 FN-381 Single Base Substitution C-A INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3798-S.SNP.7:25903575 chr07:025903575 0 W/25903575-25903575 FN3798-S SNP C -> A AC=1;AN=190;BQB=0.999228;DP=2662;DP4=1288,1285,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.63964e-14;MQSB=0.967704;RPB=0.509314;SGB=68.0854;VDB=0.458892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.7:25927428 chr07:025927428 0 W/25927428-25927428 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.850119;DP=2891;DP4=1475,1366,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.64961e-10;MQSB=0.792964;RPB=0.738549;SGB=31.1628;VDB=0.580828;EFF=INTRON(MODIFIER||||117|LOC_Os07g43300|protein_coding|CODING|LOC_Os07g43300.1|1|1) FN840-S.SNP.7:25927431 chr07:025927431 0 W/25927431-25927431 FN840-S Single Base Substitution A-G INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN907-S.SNP.7:25927431 chr07:025927431 0 W/25927431-25927431 FN907-S Single Base Substitution A-G INTRON HOMO SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN904-S.SNP.7:25927951 chr07:025927951 0 W/25927951-25927951 FN904-S Single Base Substitution T-G INTRON HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN3395-S.SNP.7:25929011 chr07:025929011 0 W/25929011-25929011 FN3395-S SNP T -> C AC=1;AN=184;BQB=0.878203;DP=3488;DP4=1791,1571,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.67832e-09;MQSB=0.97856;RPB=0.126012;SGB=53.3568;VDB=0.894192;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.7:25940433 chr07:025940433 0 W/25940433-25940433 FN-123 Single Base Substitution C-T INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3925-S.SNP.7:25944920 chr07:025944920 0 W/25944920-25944920 FN3925-S SNP G -> A AC=1;AN=158;BQB=0.999106;DP=2669;DP4=1375,1151,21,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.64423e-17;MQSB=0.95482;RPB=0.224919;SGB=125.717;VDB=0.144808;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.7:25946572 chr07:025946572 0 W/25946572-25946572 FN1014-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g43350 expressed protein SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1080-S.SNP.7:25951068 chr07:025951068 0 W/25951068-25951068 FN1080-S Single Base Substitution A-G INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3555-S.SNP.7:25953488 chr07:025953488 0 W/25953488-25953488 FN3555-S SNP A -> G AC=1;AN=188;BQB=0.956697;DP=2400;DP4=1181,1142,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.19375e-09;MQSB=0.930363;RPB=0.656584;SGB=39.5276;VDB=0.83035;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.7:25970480 chr07:025970480 0 W/25970480-25970480 FN-114 Single Base Substitution C-T INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1014-S.SNP.7:25974917 chr07:025974917 0 W/25974917-25974917 FN1014-S Single Base Substitution T-C INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2477.SNP.7:25976380 chr07:025976380 0 W/25976380-25976380 FN2477 SNP G -> C AC=1;AN=200;BQB=0.959212;DP=5118;DP4=2522,2333,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.31182e-07;MQSB=0.961861;RPB=0.87633;SGB=49.6594;VDB=0.750182;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.7:25979565 chr07:025979565 0 W/25979565-25979565 FN2172-S SNP C -> G AC=1;AN=168;BQB=0.101574;DP=3518;DP4=1884,1590,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.19575e-07;MQSB=0.943082;RPB=0.497945;SGB=-41.7816;VDB=0.808659;EFF=UTR_3_PRIME(MODIFIER||41||345|LOC_Os07g43380|protein_coding|CODING|LOC_Os07g43380.1|6|1) FN-23.SNP.7:25991341 chr07:025991341 0 W/25991341-25991341 FN-23 Single Base Substitution C-T INTRON Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN1079-S.SNP.7:25993639 chr07:025993639 0 W/25993639-25993639 FN1079-S Single Base Substitution T-C INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3887-S.SNP.7:25996390 chr07:025996390 0 W/25996390-25996390 FN3887-S SNP A -> G AC=1;AN=158;BQB=0.91096;DP=2381;DP4=1171,1118,12,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.13155e-12;MQSB=0.989367;RPB=0.736997;SGB=61.029;VDB=0.529664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.7:26000601 chr07:026000601 0 W/26000601-26000601 FN2408 SNP A -> G AC=1;AN=200;BQB=0.940807;DP=4791;DP4=2288,2198,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.33017e-09;MQSB=0.979141;RPB=0.163075;SGB=40.2696;VDB=0.0328065;EFF=INTRON(MODIFIER||||538|LOC_Os07g43420|protein_coding|CODING|LOC_Os07g43420.1|4|1) FN3437-S.SNP.7:26014814 chr07:026014814 0 W/26014814-26014814 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.47866;DP=3010;DP4=1357,1500,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000168472;MQSB=0.917474;RPB=0.0779255;SGB=25.1826;VDB=0.422799;EFF=UTR_3_PRIME(MODIFIER||548||258|LOC_Os07g43460|protein_coding|CODING|LOC_Os07g43460.1|2|1) FN2229-S.SNP.7:26029261 chr07:026029261 0 W/26029261-26029261 FN2229-S SNP T -> G AC=1;AN=190;BQB=0.357997;DP=4412;DP4=1836,2170,16,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.39483e-17;MQSB=0.971577;RPB=0.613757;SGB=-2.69832;VDB=0.0481789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.7:26030678 chr07:026030678 0 W/26030678-26030678 FN1661-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2629-S.SNP.7:26035604 chr07:026035604 0 W/26035604-26035604 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.988103;DP=5141;DP4=2642,2252,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.15004e-19;MQSB=0.996647;RPB=0.566898;SGB=63.3521;VDB=0.303356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.7:26040846 chr07:026040846 0 W/26040846-26040846 FN1047-S Single Base Substitution C-T INTRON HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN953-S.SNP.7:26042304 chr07:026042304 0 W/26042304-26042304 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN967-S.SNP.7:26043903 chr07:026043903 0 W/26043903-26043903 FN967-S Single Base Substitution T-A INTERGENIC HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN_N1-213-1.SNP.7:26044937 chr07:026044937 0 W/26044937-26044937 FN_N1-213-1 Single Base Substitution C-T Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1357-S.SNP.7:26048745 chr07:026048745 0 W/26048745-26048745 FN1357-S Single Base Substitution G-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2681-S.SNP.7:26049440 chr07:026049440 0 W/26049440-26049440 FN2681-S SNP A -> T AC=1;AN=200;BQB=0.409112;DP=4285;DP4=2046,1963,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65167e-13;MQSB=0.962841;RPB=0.43804;SGB=87.1368;VDB=0.397565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1435-S.SNP.7:26050079 chr07:026050079 0 W/26050079-26050079 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN460-S.SNP.7:26054138 chr07:026054138 0 W/26054138-26054138 FN460-S Single Base Substitution T-A INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2103-S.SNP.7:26058434 chr07:026058434 0 W/26058434-26058434 FN2103-S SNP G -> A AC=2;AN=168;BQB=0.769046;DP=3694;DP4=1938,1686,27,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.7337e-32;MQSB=0.969839;RPB=0.980682;SGB=171.981;VDB=0.335198;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.7:26068810 chr07:026068810 0 W/26068810-26068810 FN-384 Single Base Substitution T-A INTERGENIC HOMO SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN-275.SNP.7:26077487 chr07:026077487 0 W/26077487-26077487 FN-275 Single Base Substitution T-A INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3598-S.SNP.7:26078280 chr07:026078280 0 W/26078280-26078280 FN3598-S SNP T -> G AC=1;AN=188;BQB=0.970611;DP=2654;DP4=1182,1351,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53429e-10;MQSB=0.903124;RPB=0.715686;SGB=94.4119;VDB=0.148493;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.7:26079731 chr07:026079731 0 W/26079731-26079731 FN4314-S SNP G -> A AC=1;AN=170;BQB=0.999846;DP=2509;DP4=1179,1262,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.63606e-13;MQSB=0.97396;RPB=0.717471;SGB=58.9766;VDB=0.251772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.7:26079906 chr07:026079906 0 W/26079906-26079906 FN1565-S Single Base Substitution T-C INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN-89.SNP.7:26081753 chr07:026081753 0 W/26081753-26081753 FN-89 Single Base Substitution A-G INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN698-S.SNP.7:26083854 chr07:026083854 0 W/26083854-26083854 FN698-S Single Base Substitution C-T INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1626-S.SNP.7:26084483 chr07:026084483 0 W/26084483-26084483 FN1626-S SNP G -> A AC=1;AN=188;BQB=0.0847574;DP=4064;DP4=1898,2116,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.68519e-08;MQSB=0.94369;RPB=0.966633;SGB=-96.2673;VDB=0.462724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.7:26085119 chr07:026085119 0 W/26085119-26085119 FN3529-S SNP T -> G AC=1;AN=188;BQB=0.911691;DP=3060;DP4=1279,1739,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000825838;MQSB=0.938965;RPB=0.752892;SGB=26.2637;VDB=0.548241;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.7:26088604 chr07:026088604 0 W/26088604-26088604 FN1334-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2147-S.SNP.7:26090474 chr07:026090474 0 W/26090474-26090474 FN2147-S SNP A -> T AC=1;AN=168;BQB=0.609776;DP=3815;DP4=1815,1970,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.82259e-05;MQSB=0.860108;RPB=0.51282;SGB=-16.665;VDB=0.71998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.7:26101881 chr07:026101881 0 W/26101881-26101881 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.993934;DP=2675;DP4=1218,1352,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.84059e-05;MQSB=0.975103;RPB=0.780738;SGB=21.8853;VDB=0.987246;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.7:26103831 chr07:026103831 0 W/26103831-26103831 FN4184-S SNP A -> G AC=1;AN=170;BQB=0.929032;DP=2537;DP4=984,1424,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.11606e-10;MQSB=0.855599;RPB=0.886862;SGB=58.9766;VDB=0.112489;EFF=UTR_3_PRIME(MODIFIER||431||53|LOC_Os07g43604|protein_coding|CODING|LOC_Os07g43604.1|2|1) FN3759-S.SNP.7:26103847 chr07:026103847 0 W/26103847-26103847 FN3759-S SNP G -> T AC=2;AN=190;BQB=0.466963;DP=3040;DP4=1303,1623,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.68207e-15;MQSB=0.968263;RPB=0.597557;SGB=64.5217;VDB=0.797372;EFF=UTR_3_PRIME(MODIFIER||415||53|LOC_Os07g43604|protein_coding|CODING|LOC_Os07g43604.1|2|1) FN3384-S.SNP.7:26105860 chr07:026105860 0 W/26105860-26105860 FN3384-S SNP G -> A AC=1;AN=184;BQB=0.902874;DP=3094;DP4=1606,1382,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.76473e-08;MQSB=0.994462;RPB=0.450221;SGB=71.3514;VDB=0.513204;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.7:26110332 chr07:026110332 0 W/26110332-26110332 FN897-S Single Base Substitution T-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN4147-S.SNP.7:26112277 chr07:026112277 0 W/26112277-26112277 FN4147-S SNP C -> T AC=1;AN=170;BQB=0.999998;DP=2027;DP4=1413,508,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.70862e-09;MQSB=0.996123;RPB=0.589146;SGB=41.7633;VDB=0.839208;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.7:26115917 chr07:026115917 0 W/26115917-26115917 FN2386 SNP G -> A AC=1;AN=192;BQB=0.890069;DP=5015;DP4=2347,2444,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0831506;MQB=0.834869;MQSB=0;RPB=0.925601;SGB=57.6018;VDB=0.559687;EFF=INTRON(MODIFIER||||1264|LOC_Os07g43630|protein_coding|CODING|LOC_Os07g43630.1|1|1) FN-218.SNP.7:26119246 chr07:026119246 0 W/26119246-26119246 FN-218 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g43630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN492-S.SNP.7:26119594 chr07:026119594 0 W/26119594-26119594 FN492-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g43630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3556-S.SNP.7:26120689 chr07:026120689 0 W/26120689-26120689 FN3556-S SNP C -> A AC=2;AN=188;BQB=0.34199;DP=2844;DP4=1381,1377,17,23;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0826301;MQB=0.563282;MQSB=3.79042e-26;RPB=0.84967;SGB=176.191;VDB=0.849796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L907M|1264|LOC_Os07g43630|protein_coding|CODING|LOC_Os07g43630.1|3|1) FN2729-S.SNP.7:26122265 chr07:026122265 0 W/26122265-26122265 FN2729-S SNP G -> A AC=2;AN=200;BQB=0.681646;DP=4133;DP4=1488,2348,9,21;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0384708;MQB=0.995529;MQSB=2.32767e-05;RPB=0.169556;SGB=132.552;VDB=0.923631;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.7:26129483 chr07:026129483 0 W/26129483-26129483 FN4133-S SNP T -> C AC=1;AN=182;BQB=0.918815;DP=2570;DP4=1066,1370,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.31473e-05;MQSB=0.972411;RPB=0.943193;SGB=30.5793;VDB=0.405689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.7:26139528 chr07:026139528 0 W/26139528-26139528 FN3710-S SNP T -> C AC=1;AN=190;BQB=0.963711;DP=2622;DP4=1094,1442,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80893e-05;MQSB=0.930331;RPB=0.996387;SGB=30.8803;VDB=0.841906;EFF=INTRON(MODIFIER||||252|LOC_Os07g43660|protein_coding|CODING|LOC_Os07g43660.1|2|1) FN4224-S.SNP.7:26145714 chr07:026145714 0 W/26145714-26145714 FN4224-S SNP C -> T AC=1;AN=170;BQB=0.446066;DP=2787;DP4=1180,1513,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000717618;MQB=1.67762e-05;MQSB=0.250092;RPB=0.101073;SGB=27.9928;VDB=0.0153133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.7:26168874 chr07:026168874 0 W/26168874-26168874 FN3987-S SNP A -> G AC=1;AN=168;BQB=0.917179;DP=2669;DP4=1247,1289,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.08596e-10;MQSB=0.841508;RPB=0.992403;SGB=9.91396;VDB=0.933948;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.7:26169714 chr07:026169714 0 W/26169714-26169714 FN494-S Single Base Substitution G-A INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN414-S.SNP.7:26169817 chr07:026169817 0 W/26169817-26169817 FN414-S Single Base Substitution G-A INTERGENIC HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN428-S.SNP.7:26170635 chr07:026170635 0 W/26170635-26170635 FN428-S Single Base Substitution A-T INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1237-S.SNP.7:26171295 chr07:026171295 0 W/26171295-26171295 FN1237-S Single Base Substitution C-A INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1410-S.SNP.7:26179850 chr07:026179850 0 W/26179850-26179850 FN1410-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4078-S.SNP.7:26180484 chr07:026180484 0 W/26180484-26180484 FN4078-S SNP A -> G AC=2;AN=182;BQB=0.927839;DP=3258;DP4=1550,1578,20,13;HOB=0.0217365;ICB=0.494567;MQ=29;MQ0F=0.166053;MQB=0.0952715;MQSB=9.65143e-08;RPB=0.555515;SGB=105.845;VDB=0.993342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T1262A|1721|LOC_Os07g43750|protein_coding|CODING|LOC_Os07g43750.1|2|1) FN2534-S.SNP.7:26185259 chr07:026185259 0 W/26185259-26185259 FN2534-S SNP G -> C AC=2;AN=198;BQB=0.744714;DP=3673;DP4=1786,1585,21,15;HOB=0.019998;ICB=0.495001;MQ=32;MQ0F=0.085761;MQB=0.973022;MQSB=0;RPB=0.960487;SGB=38.0616;VDB=0.647636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A151G|892|LOC_Os07g43760|protein_coding|CODING|LOC_Os07g43760.1|1|1) FN704-S.SNP.7:26185455 chr07:026185455 0 W/26185455-26185455 FN704-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g43760 retrotransposon protein, putative, unclassified SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1117-S.SNP.7:26187779 chr07:026187779 0 W/26187779-26187779 FN1117-S Single Base Substitution T-A INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3385-S.SNP.7:26191854 chr07:026191854 0 W/26191854-26191854 FN3385-S SNP A -> C AC=1;AN=184;BQB=0.989223;DP=3379;DP4=1374,1850,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29577e-05;MQSB=0.993541;RPB=0.164306;SGB=25.1826;VDB=0.532765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.7:26195002 chr07:026195002 0 W/26195002-26195002 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.949179;DP=1204;DP4=671,477,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00166113;MQB=0.000343716;MQSB=0.759093;RPB=0.656237;SGB=34.4498;VDB=0.447302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:26197324 chr07:026197324 0 W/26197324-26197324 FN2218-S SNP C -> T AC=2;AN=190;BQB=0.298529;DP=3048;DP4=1271,1385,7,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.00183873;MQSB=0.000479744;RPB=0.593459;SGB=26.2136;VDB=0.941747;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.7:26203582 chr07:026203582 0 W/26203582-26203582 FN448-S Single Base Substitution G-A INTRON HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3288-S.SNP.7:26212916 chr07:026212916 0 W/26212916-26212916 FN3288-S SNP A -> G AC=1;AN=184;BQB=0.957654;DP=3237;DP4=1639,1499,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39583e-07;MQSB=0.62929;RPB=0.41294;SGB=44.2207;VDB=0.669986;EFF=INTRON(MODIFIER||||264|LOC_Os07g43810|protein_coding|CODING|LOC_Os07g43810.1|2|1) FN2164-S.SNP.7:26215383 chr07:026215383 0 W/26215383-26215383 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.875971;DP=2221;DP4=941,1175,14,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.64659e-17;MQSB=0.99998;RPB=0.99664;SGB=70.8011;VDB=0.490343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R81H|316|LOC_Os07g43820|protein_coding|CODING|LOC_Os07g43820.1|1|1) FN1254-S.SNP.7:26219370 chr07:026219370 0 W/26219370-26219370 FN1254-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3566-S.SNP.7:26220038 chr07:026220038 0 W/26220038-26220038 FN3566-S SNP G -> C AC=2;AN=188;BQB=0.8025;DP=2661;DP4=969,1437,15,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.99804e-13;MQSB=0.0663327;RPB=0.946627;SGB=64.3306;VDB=0.893018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.7:26221605 chr07:026221605 0 W/26221605-26221605 FN1103-S Single Base Substitution G-A INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-289.SNP.7:26225044 chr07:026225044 0 W/26225044-26225044 FN-289 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g43850 nucleic acid binding protein, putative, expressed SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN552-S.SNP.7:26227125 chr07:026227125 0 W/26227125-26227125 FN552-S Single Base Substitution C-T INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN3750-S.SNP.7:26227436 chr07:026227436 0 W/26227436-26227436 FN3750-S SNP A -> T AC=2;AN=190;BQB=0.965083;DP=2917;DP4=1406,1394,30,26;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=3.12354e-09;MQSB=0.559609;RPB=0.791393;SGB=211.384;VDB=0.553605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.7:26240509 chr07:026240509 0 W/26240509-26240509 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.991962;DP=2830;DP4=1365,1382,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19863e-08;MQSB=0.959938;RPB=0.922068;SGB=58.2031;VDB=0.849606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P672L|688|LOC_Os07g43870|protein_coding|CODING|LOC_Os07g43870.1|21|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P672L|688|LOC_Os07g43870|protein_coding|CODING|LOC_Os07g43870.2|21|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P672L|688|LOC_Os07g43870|protein_coding|CODING|LOC_Os07g43870.3|21|1) FN1475-S.SNP.7:26244104 chr07:026244104 0 W/26244104-26244104 FN1475-S Single Base Substitution C-T INTRON HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2634-S.SNP.7:26258241 chr07:026258241 0 W/26258241-26258241 FN2634-S SNP G -> A AC=2;AN=200;BQB=0.517743;DP=4630;DP4=2224,2098,35,30;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00259179;MQB=4.22443e-09;MQSB=0.0446737;RPB=0.915117;SGB=176.856;VDB=0.864728;EFF=INTRON(MODIFIER||||233|LOC_Os07g43925|protein_coding|CODING|LOC_Os07g43925.1|4|1) FN-218.SNP.7:26260395 chr07:026260395 0 W/26260395-26260395 FN-218 Single Base Substitution T-C INTRON HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2455.SNP.7:26262126 chr07:026262126 0 W/26262126-26262126 FN2455 SNP G -> C AC=1;AN=200;BQB=0.924234;DP=4658;DP4=2178,2205,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34031e-12;MQSB=0.662247;RPB=0.711684;SGB=42.5108;VDB=0.142092;EFF=INTRON(MODIFIER||||218|LOC_Os07g43940|protein_coding|CODING|LOC_Os07g43940.2|1|1),INTRON(MODIFIER||||218|LOC_Os07g43940|protein_coding|CODING|LOC_Os07g43940.1|1|1) FN2662-S.SNP.7:26264662 chr07:026264662 0 W/26264662-26264662 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.909602;DP=5391;DP4=2762,2381,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46714e-07;MQSB=0.979247;RPB=0.416862;SGB=29.4541;VDB=0.247426;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.7:26268419 chr07:026268419 0 W/26268419-26268419 W470-2-1 Single Base Substitution A-T UTR_3_PRIME HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2721-S.SNP.7:26283880 chr07:026283880 0 W/26283880-26283880 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.927618;DP=5064;DP4=2552,2261,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.3934e-14;MQSB=0.980627;RPB=0.147913;SGB=83.5316;VDB=0.245644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.7:26284294 chr07:026284294 0 W/26284294-26284294 FN3823-S SNP G -> A AC=2;AN=190;BQB=0.94577;DP=2734;DP4=1236,1319,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.75565e-13;MQSB=0.919363;RPB=0.229251;SGB=-10.4526;VDB=0.283246;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.7:26287359 chr07:026287359 0 W/26287359-26287359 FN836-S Single Base Substitution A-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W463-2-1.SNP.7:26305301 chr07:026305301 0 W/26305301-26305301 W463-2-1 Single Base Substitution T-G INTRON HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1757-S.SNP.7:26329895 chr07:026329895 0 W/26329895-26329895 FN1757-S SNP A -> T AC=1;AN=188;BQB=0.00228458;DP=4038;DP4=1762,2229,11,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.92859e-05;MQSB=0.936736;RPB=0.892899;SGB=-291.154;VDB=0.806383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.7:26333348 chr07:026333348 0 W/26333348-26333348 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.647389;DP=2682;DP4=1219,1364,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0002507;MQSB=0.0817874;RPB=0.465504;SGB=26.2136;VDB=0.298056;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.7:26339412 chr07:026339412 0 W/26339412-26339412 FN-55 Single Base Substitution T-C INTERGENIC HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN626-S.SNP.7:26341905 chr07:026341905 0 W/26341905-26341905 FN626-S Single Base Substitution T-C INTRON HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3821-S.SNP.7:26344568 chr07:026344568 0 W/26344568-26344568 FN3821-S SNP A -> G AC=1;AN=190;BQB=0.621332;DP=2702;DP4=1417,1208,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000316507;MQSB=0.000902015;RPB=0.955105;SGB=44.5415;VDB=0.421704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.7:26347161 chr07:026347161 0 W/26347161-26347161 FN3496-S SNP T -> A AC=2;AN=188;BQB=0.858482;DP=2314;DP4=716,1468,6,18;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=6.48281e-06;MQSB=6.46683e-07;RPB=0.578583;SGB=103.498;VDB=0.00781167;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.7:26349033 chr07:026349033 0 W/26349033-26349033 FN-274 Single Base Substitution C-T INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN2788-S.SNP.7:26353287 chr07:026353287 0 W/26353287-26353287 FN2788-S SNP A -> G AC=1;AN=198;BQB=0.793078;DP=4446;DP4=1824,2383,4,16;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0353126;MQB=0.166233;MQSB=5.78497e-06;RPB=0.18263;SGB=86.3098;VDB=0.0218946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3531-S.SNP.7:26377429 chr07:026377429 0 W/26377429-26377429 FN3531-S SNP T -> A AC=1;AN=188;BQB=0.972619;DP=2855;DP4=1312,1465,1,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.27364e-05;MQSB=0.984793;RPB=0.408028;SGB=26.2637;VDB=0.551097;EFF=UTR_3_PRIME(MODIFIER||17||411|LOC_Os07g44130|protein_coding|CODING|LOC_Os07g44130.1|2|1) FN406-S.SNP.7:26380188 chr07:026380188 0 W/26380188-26380188 FN406-S Single Base Substitution G-C INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN972-S.SNP.7:26381412 chr07:026381412 0 W/26381412-26381412 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-388.SNP.7:26385510 chr07:026385510 0 W/26385510-26385510 FN-388 Single Base Substitution G-T INTERGENIC HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN1517-S.SNP.7:26395818 chr07:026395818 0 W/26395818-26395818 FN1517-S Single Base Substitution A-G INTRON Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1517-S.SNP.7:26395819 chr07:026395819 0 W/26395819-26395819 FN1517-S Single Base Substitution G-A INTRON Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3362-S.SNP.7:26407895 chr07:026407895 0 W/26407895-26407895 FN3362-S SNP C -> T AC=2;AN=184;BQB=0.983951;DP=3896;DP4=2519,1268,29,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.10824e-26;MQSB=0.997544;RPB=0.783092;SGB=202.483;VDB=0.0975267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E293K|600|LOC_Os07g44190|protein_coding|CODING|LOC_Os07g44190.1|1|1) FN894-S.SNP.7:26420001 chr07:026420001 0 W/26420001-26420001 FN894-S Single Base Substitution C-T INTRON HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1613-S.SNP.7:26435598 chr07:026435598 0 W/26435598-26435598 FN1613-S Single Base Substitution A-T INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN2620-S.SNP.7:26445094 chr07:026445094 0 W/26445094-26445094 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.863017;DP=3670;DP4=1796,1642,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0258856;MQB=0.00708591;MQSB=1.31113e-26;RPB=0.995865;SGB=50.9344;VDB=0.847136;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.7:26445279 chr07:026445279 0 W/26445279-26445279 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN-61.SNP.7:26451704 chr07:026451704 0 W/26451704-26451704 FN-61 Single Base Substitution C-A INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN768-S.SNP.7:26459625 chr07:026459625 0 W/26459625-26459625 FN768-S Single Base Substitution C-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN1443-S.SNP.7:26464165 chr07:026464165 0 W/26464165-26464165 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN846-S.SNP.7:26465630 chr07:026465630 0 W/26465630-26465630 FN846-S Single Base Substitution G-A INTRON HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN4167-S.SNP.7:26466454 chr07:026466454 0 W/26466454-26466454 FN4167-S SNP A -> G AC=1;AN=170;BQB=0.98692;DP=2464;DP4=1147,1244,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.15364e-06;MQSB=0.994731;RPB=0.96381;SGB=38.987;VDB=0.577201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H202R|525|LOC_Os07g44290|protein_coding|CODING|LOC_Os07g44290.1|4|1) FN-274.SNP.7:26475507 chr07:026475507 0 W/26475507-26475507 FN-274 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g44320 expressed protein SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN1012-S.SNP.7:26478686 chr07:026478686 0 W/26478686-26478686 FN1012-S Single Base Substitution G-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN501-S.SNP.7:26479962 chr07:026479962 0 W/26479962-26479962 FN501-S Single Base Substitution T-A INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN3488-S.SNP.7:26489004 chr07:026489004 0 W/26489004-26489004 FN3488-S SNP C -> T AC=2;AN=184;BQB=0.441457;DP=2977;DP4=1403,1490,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.70421e-11;MQSB=0.881309;RPB=0.176778;SGB=81.5311;VDB=0.19936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.7:26490711 chr07:026490711 0 W/26490711-26490711 FN2471 SNP A -> T AC=1;AN=200;BQB=0.840941;DP=4794;DP4=2209,2233,17,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00521485;MQB=5.56725e-16;MQSB=0.323711;RPB=0.85829;SGB=68.5625;VDB=0.734459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.7:26492874 chr07:026492874 0 W/26492874-26492874 FN2385 SNP C -> T AC=1;AN=192;BQB=0.637157;DP=4957;DP4=2293,2479,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.03944e-07;MQSB=0.420957;RPB=0.740867;SGB=49.2105;VDB=0.148495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E598K|732|LOC_Os07g44340|protein_coding|CODING|LOC_Os07g44340.1|2|1) FN3550-S.SNP.7:26494690 chr07:026494690 0 W/26494690-26494690 FN3550-S SNP T -> G AC=2;AN=188;BQB=0.956134;DP=2816;DP4=1453,1086,15,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.49957e-14;MQSB=0.918585;RPB=0.275974;SGB=64.2256;VDB=0.495568;EFF=INTRON(MODIFIER||||732|LOC_Os07g44340|protein_coding|CODING|LOC_Os07g44340.1|1|1) FN712-S.SNP.7:26496780 chr07:026496780 0 W/26496780-26496780 FN712-S Single Base Substitution C-T INTERGENIC HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2177-S.SNP.7:26500129 chr07:026500129 0 W/26500129-26500129 FN2177-S SNP A -> G AC=1;AN=168;BQB=0.0369665;DP=3411;DP4=1950,1434,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.36987e-07;MQSB=0.905453;RPB=0.963514;SGB=-14.0801;VDB=0.47628;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.7:26517220 chr07:026517220 0 W/26517220-26517220 FN4190-S SNP A -> G AC=2;AN=170;BQB=0.90274;DP=2192;DP4=1033,954,8,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.07996e-06;MQSB=0.0571463;RPB=0.48219;SGB=41.7633;VDB=0.157895;EFF=UTR_3_PRIME(MODIFIER||167||200|LOC_Os07g44370|protein_coding|CODING|LOC_Os07g44370.1|1|1) FN-180.SNP.7:26525904 chr07:026525904 0 W/26525904-26525904 FN-180 Single Base Substitution C-A INTRON HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN2398.SNP.7:26525904 chr07:026525904 0 W/26525904-26525904 FN2398 SNP C -> A AC=1;AN=200;BQB=0.0704665;DP=8831;DP4=4370,3944,20,18;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0135885;MQB=9.05075e-11;MQSB=0.870073;RPB=0.901663;SGB=-1.00683;VDB=0.33701;EFF=INTRON(MODIFIER||||1135|LOC_Os07g44390|protein_coding|CODING|LOC_Os07g44390.1|1|1) FN2788-S.SNP.7:26526714 chr07:026526714 0 W/26526714-26526714 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.960741;DP=5429;DP4=2917,2241,17,5;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0.119543;MQB=0.160101;MQSB=2.53415e-05;RPB=0.354172;SGB=68.91;VDB=0.226691;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.7:26527721 chr07:026527721 0 W/26527721-26527721 FN4023-S SNP G -> A AC=1;AN=168;BQB=0.992807;DP=2691;DP4=1322,1264,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000371609;MQB=1.28307e-06;MQSB=0.97989;RPB=0.999996;SGB=31.3172;VDB=0.651264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.7:26527974 chr07:026527974 0 W/26527974-26527974 FN3893-S SNP C -> T AC=2;AN=158;BQB=0.937613;DP=2579;DP4=1348,1118,16,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.61376e-16;MQSB=0.995041;RPB=0.726558;SGB=116.978;VDB=0.473905;EFF=UTR_3_PRIME(MODIFIER||290||353|LOC_Os07g44400|protein_coding|CODING|LOC_Os07g44400.1|11|1) FN3345-S.SNP.7:26530107 chr07:026530107 0 W/26530107-26530107 FN3345-S SNP G -> A AC=2;AN=184;BQB=0.87397;DP=2423;DP4=1152,1192,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.73641e-12;MQSB=0.995326;RPB=0.760683;SGB=70.9657;VDB=0.982891;EFF=INTRON(MODIFIER||||353|LOC_Os07g44400|protein_coding|CODING|LOC_Os07g44400.1|3|1) FN2792-S.SNP.7:26531689 chr07:026531689 0 W/26531689-26531689 FN2792-S SNP C -> T AC=1;AN=198;BQB=0.5266;DP=3379;DP4=1674,1555,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.16026e-07;MQSB=0.980428;RPB=0.110574;SGB=40.3588;VDB=0.0797975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.7:26539910 chr07:026539910 0 W/26539910-26539910 FN1679-S SNP G -> A AC=1;AN=188;BQB=0.855799;DP=2623;DP4=1350,1223,16,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.45936e-15;MQSB=0.943614;RPB=0.505641;SGB=19.4279;VDB=0.714534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.7:26539916 chr07:026539916 0 W/26539916-26539916 FN1679-S SNP C -> A AC=1;AN=188;BQB=0.493913;DP=2728;DP4=1396,1276,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55058e-12;MQSB=0.93869;RPB=0.883788;SGB=43.8792;VDB=0.876498;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.7:26545715 chr07:026545715 0 W/26545715-26545715 FN1334-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2499.SNP.7:26562374 chr07:026562374 0 W/26562374-26562374 FN2499 SNP C -> T AC=2;AN=200;BQB=0.0551875;DP=4022;DP4=2072,1597,24,10;HOB=0.0198;ICB=0.495051;MQ=22;MQ0F=0.385878;MQB=0.426933;MQSB=0;RPB=0.373816;SGB=73.7728;VDB=0.894121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G166S|384|LOC_Os07g44480|protein_coding|CODING|LOC_Os07g44480.1|2|1) FN2265-S.SNP.7:26562444 chr07:026562444 0 W/26562444-26562444 FN2265-S SNP A -> G AC=1;AN=190;BQB=0.979752;DP=4168;DP4=1771,1976,19,14;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.237044;MQB=0.88534;MQSB=0;RPB=0.762191;SGB=107.178;VDB=0.444467;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V142|384|LOC_Os07g44480|protein_coding|CODING|LOC_Os07g44480.1|2|1) FN-350.SNP.7:26564418 chr07:026564418 0 W/26564418-26564418 FN-350 Single Base Substitution T-G INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2112-S.SNP.7:26565346 chr07:026565346 0 W/26565346-26565346 FN2112-S SNP A -> T AC=1;AN=168;BQB=0.0472068;DP=2982;DP4=930,2019,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2409e-08;MQSB=0.930279;RPB=0.84106;SGB=-66.4989;VDB=0.951517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.7:26568546 chr07:026568546 0 W/26568546-26568546 FN2703-S SNP C -> T AC=1;AN=200;BQB=0.652411;DP=4824;DP4=2238,2347,4,8;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0497512;MQB=0.377212;MQSB=1.89477e-08;RPB=0.642484;SGB=-0.141083;VDB=0.364816;EFF=INTRON(MODIFIER||||384|LOC_Os07g44499|protein_coding|CODING|LOC_Os07g44499.1|1|1) FN3455-S.SNP.7:26578290 chr07:026578290 0 W/26578290-26578290 FN3455-S SNP G -> T AC=1;AN=184;BQB=0.594084;DP=3066;DP4=1474,1516,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00130463;MQB=5.07641e-06;MQSB=0.971703;RPB=0.992258;SGB=75.8731;VDB=0.528533;EFF=INTRON(MODIFIER||||384|LOC_Os07g44499|protein_coding|CODING|LOC_Os07g44499.1|1|1) FN-345.SNP.7:26582956 chr07:026582956 0 W/26582956-26582956 FN-345 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g44520 retrotransposon protein, putative, unclassified, expressed SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-345.SNP.7:26582957 chr07:026582957 0 W/26582957-26582957 FN-345 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g44520 retrotransposon protein, putative, unclassified, expressed SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-274.SNP.7:26585213 chr07:026585213 0 W/26585213-26585213 FN-274 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g44520 retrotransposon protein, putative, unclassified, expressed SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN-274.SNP.7:26585218 chr07:026585218 0 W/26585218-26585218 FN-274 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os07g44520 retrotransposon protein, putative, unclassified, expressed SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3581-S.SNP.7:26604054 chr07:026604054 0 W/26604054-26604054 FN3581-S SNP A -> G AC=2;AN=190;BQB=0.954852;DP=2884;DP4=1311,1323,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.90377e-14;MQSB=0.995917;RPB=0.407266;SGB=16.5421;VDB=0.511338;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P91|322|LOC_Os07g44550|protein_coding|CODING|LOC_Os07g44550.1|2|1) FN2544-S.SNP.7:26610970 chr07:026610970 0 W/26610970-26610970 FN2544-S SNP C -> A AC=1;AN=198;BQB=0.331039;DP=3972;DP4=1691,1994,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.06414e-06;MQSB=0.812864;RPB=0.986609;SGB=54.144;VDB=0.486863;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P118|609|LOC_Os07g44560|protein_coding|CODING|LOC_Os07g44560.1|1|1) FN2452.SNP.7:26611277 chr07:026611277 0 W/26611277-26611277 FN2452 SNP C -> G AC=2;AN=200;BQB=0.222023;DP=3706;DP4=1726,1627,19,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.74591e-19;MQSB=0.0192491;RPB=0.763344;SGB=146.368;VDB=0.726801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G16A|609|LOC_Os07g44560|protein_coding|CODING|LOC_Os07g44560.1|1|1) FN2204-S.SNP.7:26621083 chr07:026621083 0 W/26621083-26621083 FN2204-S SNP A -> G AC=1;AN=190;BQB=0.367466;DP=4614;DP4=2207,2141,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.66915e-13;MQSB=0.915859;RPB=0.360645;SGB=90.0802;VDB=0.883056;EFF=START_GAINED(LOW||||161|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.3|1|1),START_GAINED(LOW||||219|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.2|1|1),UTR_5_PRIME(MODIFIER||954||161|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.3|1|1),UTR_5_PRIME(MODIFIER||618||219|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.2|1|1),INTRON(MODIFIER||||219|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.1|1|1),INTRON(MODIFIER||||161|LOC_Os07g44610|protein_coding|CODING|LOC_Os07g44610.4|1|1) FN-370.SNP.7:26622752 chr07:026622752 0 W/26622752-26622752 FN-370 Single Base Substitution T-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2702-S.SNP.7:26626482 chr07:026626482 0 W/26626482-26626482 FN2702-S SNP T -> A AC=1;AN=200;BQB=0.977674;DP=4919;DP4=2221,2482,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.42898e-12;MQSB=0.854499;RPB=0.657002;SGB=95.7111;VDB=0.240433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.7:26629866 chr07:026629866 0 W/26629866-26629866 FN-140 Single Base Substitution C-T INTRON HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN4105-S.SNP.7:26634334 chr07:026634334 0 W/26634334-26634334 FN4105-S SNP T -> G AC=1;AN=182;BQB=0.980196;DP=3226;DP4=1621,1423,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.35923e-10;MQSB=0.706779;RPB=0.199627;SGB=62.1548;VDB=0.681862;EFF=INTRON(MODIFIER||||620|LOC_Os07g44640|protein_coding|CODING|LOC_Os07g44640.1|1|1) FN4105-S.SNP.7:26634335 chr07:026634335 0 W/26634335-26634335 FN4105-S SNP T -> C AC=1;AN=182;BQB=0.854937;DP=3223;DP4=1575,1485,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.63191e-09;MQSB=0.666655;RPB=0.187078;SGB=57.644;VDB=0.688029;EFF=INTRON(MODIFIER||||620|LOC_Os07g44640|protein_coding|CODING|LOC_Os07g44640.1|1|1) FN3301-S.SNP.7:26647677 chr07:026647677 0 W/26647677-26647677 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.98563;DP=2710;DP4=1265,1370,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0228782;MQB=0.00135616;MQSB=0.302844;RPB=0.225759;SGB=35.1773;VDB=0.0276294;EFF=SPLICE_SITE_DONOR(HIGH||||964|LOC_Os07g44670|protein_coding|CODING|LOC_Os07g44670.1|10|1),INTRON(MODIFIER||||964|LOC_Os07g44670|protein_coding|CODING|LOC_Os07g44670.1|10|1);LOF=(LOC_Os07g44670|LOC_Os07g44670|1|1.00) FN3287-S.SNP.7:26648928 chr07:026648928 0 W/26648928-26648928 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.957576;DP=2507;DP4=1176,1243,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00319107;MQB=0.010766;MQSB=0.0285124;RPB=0.544779;SGB=35.7479;VDB=0.776151;EFF=INTRON(MODIFIER||||964|LOC_Os07g44670|protein_coding|CODING|LOC_Os07g44670.1|6|1) FN707-S.SNP.7:26651054 chr07:026651054 0 W/26651054-26651054 FN707-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g44670 retrotransposon protein, putative, unclassified, expressed SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN_N1-220-1.SNP.7:26660101 chr07:026660101 0 W/26660101-26660101 FN_N1-220-1 Single Base Substitution A-G Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3464-S.SNP.7:26674590 chr07:026674590 0 W/26674590-26674590 FN3464-S SNP T -> C AC=2;AN=184;BQB=0.301161;DP=2587;DP4=1047,1469,7,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.85921e-08;MQSB=0.742769;RPB=0.0294857;SGB=89.4385;VDB=0.0395629;EFF=INTRON(MODIFIER||||310|LOC_Os07g44690|protein_coding|CODING|LOC_Os07g44690.1|1|1) FN547-S.SNP.7:26674664 chr07:026674664 0 W/26674664-26674664 FN547-S Single Base Substitution G-T INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN1651-S.SNP.7:26677878 chr07:026677878 0 W/26677878-26677878 FN1651-S Single Base Substitution A-G INTRON HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2271-S.SNP.7:26678417 chr07:026678417 0 W/26678417-26678417 FN2271-S SNP A -> C AC=2;AN=190;BQB=0.673415;DP=4765;DP4=2305,2100,21,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1676e-20;MQSB=0.906212;RPB=0.715795;SGB=124.947;VDB=0.0754247;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtG|V170|288|LOC_Os07g44700|protein_coding|CODING|LOC_Os07g44700.1|5|1) FN1020-S.SNP.7:26681219 chr07:026681219 0 W/26681219-26681219 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2105-S.SNP.7:26685263 chr07:026685263 0 W/26685263-26685263 FN2105-S SNP T -> C AC=1;AN=168;BQB=0.0236556;DP=4202;DP4=2314,1857,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22066e-06;MQSB=0.912644;RPB=0.117977;SGB=-61.7914;VDB=0.951541;EFF=INTRON(MODIFIER||||594|LOC_Os07g44710|protein_coding|CODING|LOC_Os07g44710.1|4|1) FN734-S.SNP.7:26687940 chr07:026687940 0 W/26687940-26687940 FN734-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g44710 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN_777-2-1.SNP.7:26704345 chr07:026704345 0 W/26704345-26704345 FN_777-2-1 Single Base Substitution A-C Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN_777-2-1.SNP.7:26704346 chr07:026704346 0 W/26704346-26704346 FN_777-2-1 Single Base Substitution C-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN_777-2-1.SNP.7:26704347 chr07:026704347 0 W/26704347-26704347 FN_777-2-1 Single Base Substitution T-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1630-S.SNP.7:26705339 chr07:026705339 0 W/26705339-26705339 FN1630-S Single Base Substitution A-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1515-S.SNP.7:26707412 chr07:026707412 0 W/26707412-26707412 FN1515-S Single Base Substitution G-A INTRON HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2456.SNP.7:26710332 chr07:026710332 0 W/26710332-26710332 FN2456 SNP G -> T AC=1;AN=200;BQB=0.917457;DP=4657;DP4=2180,2253,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.42461e-10;MQSB=0.531885;RPB=0.986092;SGB=63.4749;VDB=0.625536;EFF=INTRON(MODIFIER||||105|LOC_Os07g44744|protein_coding|CODING|LOC_Os07g44744.1|3|1) FN3355-S.SNP.7:26712115 chr07:026712115 0 W/26712115-26712115 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.894459;DP=3693;DP4=2118,1421,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30603e-07;MQSB=0.936503;RPB=0.953818;SGB=62.3078;VDB=0.204966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2568-S.SNP.7:26713345 chr07:026713345 0 W/26713345-26713345 FN2568-S SNP C -> G AC=1;AN=198;BQB=0.515609;DP=3899;DP4=1936,1647,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00155502;MQSB=0.481472;RPB=0.874086;SGB=11.1786;VDB=0.794525;EFF=INTRON(MODIFIER||||173|LOC_Os07g44750|protein_coding|CODING|LOC_Os07g44750.1|1|1) FN3840-S.SNP.7:26718085 chr07:026718085 0 W/26718085-26718085 FN3840-S SNP G -> T AC=2;AN=190;BQB=0.94678;DP=2645;DP4=1304,1232,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10097e-20;MQSB=0.926455;RPB=0.127468;SGB=153.834;VDB=0.137652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.7:26718706 chr07:026718706 0 W/26718706-26718706 FN2321 SNP T -> C AC=1;AN=192;BQB=0.974246;DP=5286;DP4=2518,2419,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000189179;MQB=3.79005e-06;MQSB=0.890318;RPB=0.359922;SGB=18.6565;VDB=0.606925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.7:26724686 chr07:026724686 0 W/26724686-26724686 FN1732-S SNP T -> G AC=1;AN=188;BQB=0.0510483;DP=3628;DP4=1753,1827,18,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56649e-09;MQSB=0.910671;RPB=0.946705;SGB=-214.621;VDB=0.993767;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.7:26730783 chr07:026730783 0 W/26730783-26730783 FN_N1-151-7 Single Base Substitution G-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. W481-5-1.SNP.7:26733039 chr07:026733039 0 W/26733039-26733039 W481-5-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g44790 transport protein particle component, Bet3, domain containing protein, expressed SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3748-S.SNP.7:26742105 chr07:026742105 0 W/26742105-26742105 FN3748-S SNP C -> T AC=1;AN=190;BQB=0.965762;DP=1699;DP4=776,844,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.00588582;MQB=0.91185;MQSB=0.00351965;RPB=0.988103;SGB=53.6492;VDB=0.19108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.7:26742489 chr07:026742489 0 W/26742489-26742489 FN3956-S SNP A -> T AC=1;AN=168;BQB=0.284429;DP=1893;DP4=937,751,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00211305;MQB=0.00775604;MQSB=4.6128e-12;RPB=0.895905;SGB=47.7421;VDB=0.952086;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.7:26744823 chr07:026744823 0 W/26744823-26744823 FN4189-S SNP T -> C AC=2;AN=170;BQB=0.909895;DP=2761;DP4=1266,1415,14,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.53234e-12;MQSB=0.791723;RPB=0.652295;SGB=83.4133;VDB=0.831037;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.7:26750738 chr07:026750738 0 W/26750738-26750738 FN3427-S SNP T -> A AC=1;AN=184;BQB=0.260897;DP=2861;DP4=1311,1466,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00574361;MQSB=0.812191;RPB=0.561243;SGB=21.6609;VDB=0.190636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.7:26750819 chr07:026750819 0 W/26750819-26750819 FN1213-S Single Base Substitution A-G INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2725-S.SNP.7:26750819 chr07:026750819 0 W/26750819-26750819 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.976251;DP=4692;DP4=2232,2230,18,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000852515;MQB=5.25154e-18;MQSB=0.730064;RPB=0.360346;SGB=115.978;VDB=0.287486;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.7:26750819 chr07:026750819 0 W/26750819-26750819 FN888-S Single Base Substitution A-G INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN673-S.SNP.7:26752557 chr07:026752557 0 W/26752557-26752557 FN673-S Single Base Substitution T-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. 701-3.SNP.7:26754220 chr07:026754220 0 W/26754220-26754220 701-3 Single Base Substitution A-C INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN373-S.SNP.7:26756789 chr07:026756789 0 W/26756789-26756789 FN373-S Single Base Substitution G-A INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN-268.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN-268 Single Base Substitution G-A INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1033-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1033-S Single Base Substitution G-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1192-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1192-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1220-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1220-S Single Base Substitution G-A INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1255-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1255-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1444-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1444-S Single Base Substitution G-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1496-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1496-S Single Base Substitution G-A INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1734-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN1734-S SNP G -> A AC=2;AN=188;BQB=0.617052;DP=2987;DP4=814,2120,19,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.95471e-18;MQSB=0.556123;RPB=0.764192;SGB=-88.1232;VDB=0.799494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2258-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN2258-S SNP G -> A AC=1;AN=190;BQB=0.185624;DP=4895;DP4=1896,2687,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62171e-09;MQSB=0.341483;RPB=0.743168;SGB=-13.222;VDB=0.511853;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN3296-S SNP G -> A AC=2;AN=184;BQB=0.618007;DP=3193;DP4=1461,1566,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.2057e-14;MQSB=0.990154;RPB=0.655498;SGB=56.0583;VDB=0.926076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN3656-S SNP G -> A AC=2;AN=190;BQB=0.417456;DP=2769;DP4=1112,1484,14,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.83724e-18;MQSB=0.999254;RPB=0.633126;SGB=-45.693;VDB=0.605691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN3850-S SNP G -> A AC=1;AN=158;BQB=0.423409;DP=2436;DP4=993,1306,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.72474e-11;MQSB=0.956835;RPB=0.516229;SGB=4.82504;VDB=0.838942;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN3945-S SNP G -> A AC=2;AN=168;BQB=0.66165;DP=2633;DP4=1091,1381,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.40953e-11;MQSB=0.909337;RPB=0.0280143;SGB=41.6313;VDB=0.190798;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN4132-S SNP G -> A AC=2;AN=182;BQB=0.903761;DP=3082;DP4=1367,1597,13,26;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.23688e-21;MQSB=0.983381;RPB=0.990519;SGB=83.4047;VDB=0.297466;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN679-S Single Base Substitution G-A INTERGENIC HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN754-S.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN754-S Single Base Substitution G-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN_830-6-1.SNP.7:26760017 chr07:026760017 0 W/26760017-26760017 FN_830-6-1 Single Base Substitution G-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3713-S.SNP.7:26760109 chr07:026760109 0 W/26760109-26760109 FN3713-S SNP A -> C AC=1;AN=190;BQB=0.817714;DP=2551;DP4=1131,1212,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2761e-08;MQSB=0.892451;RPB=0.906269;SGB=7.21887;VDB=0.815362;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.7:26783315 chr07:026783315 0 W/26783315-26783315 FN3312-S SNP A -> T AC=1;AN=184;BQB=0.936715;DP=3372;DP4=1709,1499,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.82873e-06;MQSB=0.585424;RPB=0.891853;SGB=35.7479;VDB=0.711694;EFF=UTR_3_PRIME(MODIFIER||137||345|LOC_Os07g44860|protein_coding|CODING|LOC_Os07g44860.1|1|1) FN2140-S.SNP.7:26786190 chr07:026786190 0 W/26786190-26786190 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.0763312;DP=2779;DP4=1528,1209,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.855e-05;MQSB=0.666929;RPB=0.851371;SGB=-16.665;VDB=0.345875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:26790483 chr07:026790483 0 W/26790483-26790483 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.762419;DP=4957;DP4=2552,2118,18,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201735;MQB=5.53162e-15;MQSB=0.114195;RPB=0.313541;SGB=100.07;VDB=0.472342;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.7:26791201 chr07:026791201 0 W/26791201-26791201 FN732-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN3512-S.SNP.7:26794115 chr07:026794115 0 W/26794115-26794115 FN3512-S SNP G -> C AC=1;AN=188;BQB=0.792101;DP=4591;DP4=2166,2326,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04419e-13;MQSB=0.939036;RPB=0.905787;SGB=89.8686;VDB=0.997885;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L126|346|LOC_Os07g44900|protein_coding|CODING|LOC_Os07g44900.1|1|1) FN2531-S.SNP.7:26804185 chr07:026804185 0 W/26804185-26804185 FN2531-S SNP G -> T AC=2;AN=198;BQB=0.349098;DP=4389;DP4=2029,2047,29,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.91402e-28;MQSB=0.413343;RPB=0.846624;SGB=5.20806;VDB=0.616528;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.7:26804921 chr07:026804921 0 W/26804921-26804921 FN1392-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2158-S.SNP.7:26806106 chr07:026806106 0 W/26806106-26806106 FN2158-S SNP A -> T AC=2;AN=168;BQB=0.359372;DP=3363;DP4=1754,1562,18,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.74021e-18;MQSB=0.991392;RPB=0.97844;SGB=-8.47945;VDB=0.263514;EFF=UTR_3_PRIME(MODIFIER||219||207|LOC_Os07g44930|protein_coding|CODING|LOC_Os07g44930.1|1|1) FN3283-S.SNP.7:26809224 chr07:026809224 0 W/26809224-26809224 FN3283-S SNP C -> T AC=2;AN=184;BQB=0.9945;DP=3086;DP4=1258,1713,7,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.89188e-11;MQSB=0.97321;RPB=0.888644;SGB=49.835;VDB=0.240336;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.7:26809227 chr07:026809227 0 W/26809227-26809227 FN3283-S SNP C -> G AC=2;AN=184;BQB=0.97475;DP=3077;DP4=1271,1688,7,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.54537e-13;MQSB=0.996436;RPB=0.989964;SGB=60.4004;VDB=0.150816;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.7:26814982 chr07:026814982 0 W/26814982-26814982 FN868-S Single Base Substitution G-C INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN993-S.SNP.7:26816304 chr07:026816304 0 W/26816304-26816304 FN993-S Single Base Substitution C-A INTRON HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2482.SNP.7:26826142 chr07:026826142 0 W/26826142-26826142 FN2482 SNP G -> T AC=1;AN=200;BQB=0.927821;DP=4372;DP4=1881,2142,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27522e-06;MQSB=0.968787;RPB=0.495112;SGB=25.849;VDB=0.895256;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.7:26826378 chr07:026826378 0 W/26826378-26826378 FN1089-S Single Base Substitution G-A INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1689-S.SNP.7:26830567 chr07:026830567 0 W/26830567-26830567 FN1689-S SNP C -> T AC=2;AN=188;BQB=0.992258;DP=2630;DP4=1397,1146,9,11;HOB=0.0210502;ICB=0.494738;MQ=35;MQ0F=0.0847909;MQB=0.653906;MQSB=0;RPB=0.549662;SGB=85.3253;VDB=0.229976;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN-158 Single Base Substitution T-A INTRON HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-248.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN-248 Single Base Substitution T-A INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2422.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN2422 SNP T -> A AC=2;AN=200;BQB=0.957032;DP=4772;DP4=2344,2087,31,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.11515e-27;MQSB=0.746932;RPB=0.993004;SGB=64.0657;VDB=0.0806639;EFF=INTRON(MODIFIER||||240|LOC_Os07g44980|protein_coding|CODING|LOC_Os07g44980.1|1|1) FN3427-S.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN3427-S SNP T -> A AC=2;AN=184;BQB=0.961999;DP=2906;DP4=1511,1286,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.81871e-13;MQSB=0.998907;RPB=0.900547;SGB=98.4821;VDB=0.290614;EFF=INTRON(MODIFIER||||240|LOC_Os07g44980|protein_coding|CODING|LOC_Os07g44980.1|1|1) FN4167-S.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN4167-S SNP T -> A AC=1;AN=170;BQB=0.975565;DP=2517;DP4=1259,1158,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.29896e-09;MQSB=0.999247;RPB=0.748237;SGB=38.3207;VDB=0.417754;EFF=INTRON(MODIFIER||||240|LOC_Os07g44980|protein_coding|CODING|LOC_Os07g44980.1|1|1) FN418-S.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN418-S Single Base Substitution T-A INTRON HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.7:26833401 chr07:026833401 0 W/26833401-26833401 FN_1017-1 Single Base Substitution T-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2785-S.SNP.7:26835152 chr07:026835152 0 W/26835152-26835152 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.892681;DP=4099;DP4=2097,1820,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.75076e-11;MQSB=0.996721;RPB=0.874287;SGB=65.3149;VDB=0.635079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.7:26835789 chr07:026835789 0 W/26835789-26835789 FN2407 SNP G -> A AC=1;AN=200;BQB=0.493789;DP=4063;DP4=1983,1791,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12058e-13;MQSB=0.564179;RPB=0.988022;SGB=52.9314;VDB=0.148768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN1014-S Single Base Substitution G-A INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1122-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN1122-S Single Base Substitution G-A INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1317-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN1317-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1461-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1624-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN1624-S Single Base Substitution G-A INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2272-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN2272-S SNP G -> A AC=2;AN=190;BQB=0.703317;DP=3939;DP4=1795,1801,25,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.97069e-29;MQSB=0.93596;RPB=0.661044;SGB=118.895;VDB=0.968997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN3387-S SNP G -> A AC=2;AN=184;BQB=0.0911328;DP=2157;DP4=1016,1011,12,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.44242e-13;MQSB=0.481815;RPB=0.591598;SGB=25.0638;VDB=0.46089;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN910-S Single Base Substitution G-A INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.7:26844200 chr07:026844200 0 W/26844200-26844200 FN957-S Single Base Substitution G-A INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN-89.SNP.7:26849852 chr07:026849852 0 W/26849852-26849852 FN-89 Single Base Substitution G-T UTR_3_PRIME HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-388.SNP.7:26849869 chr07:026849869 0 W/26849869-26849869 FN-388 Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN3613-S.SNP.7:26850889 chr07:026850889 0 W/26850889-26850889 FN3613-S SNP T -> G AC=2;AN=190;BQB=0.88281;DP=3464;DP4=1727,1583,23,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90125e-22;MQSB=0.888063;RPB=0.994465;SGB=149.825;VDB=0.870962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.7:26854960 chr07:026854960 0 W/26854960-26854960 FN2698-S SNP G -> T AC=1;AN=200;BQB=0.992878;DP=5243;DP4=2594,2389,14,30;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25886e-25;MQSB=0.853117;RPB=0.492102;SGB=197.025;VDB=0.323822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.7:26864242 chr07:026864242 0 W/26864242-26864242 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.788465;DP=3265;DP4=1533,1622,15,5;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0392037;MQB=0.0763239;MQSB=1.41401e-06;RPB=0.950772;SGB=33.2965;VDB=0.440642;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V551I|1963|LOC_Os07g45020|protein_coding|CODING|LOC_Os07g45020.1|1|1) FN2782-S.SNP.7:26867085 chr07:026867085 0 W/26867085-26867085 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.759183;DP=4046;DP4=1967,1859,4,14;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00741473;MQB=0.0152955;MQSB=0.108519;RPB=0.868297;SGB=77.1196;VDB=0.263198;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A1431|1963|LOC_Os07g45020|protein_coding|CODING|LOC_Os07g45020.1|3|1) FN_809-6-1.SNP.7:26867193 chr07:026867193 0 W/26867193-26867193 FN_809-6-1 Single Base Substitution G-A HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN1216-S.SNP.7:26869010 chr07:026869010 0 W/26869010-26869010 FN1216-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os07g45030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1478-S.SNP.7:26871529 chr07:026871529 0 W/26871529-26871529 FN1478-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g45030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3690-S.SNP.7:26873354 chr07:026873354 0 W/26873354-26873354 FN3690-S SNP C -> T AC=1;AN=190;BQB=0.999889;DP=2742;DP4=1268,1364,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0229759;MQB=0.0360809;MQSB=0.000294229;RPB=0.886545;SGB=53.6492;VDB=0.604715;EFF=INTRON(MODIFIER||||183|LOC_Os07g45039|protein_coding|CODING|LOC_Os07g45039.1|1|1) FN1080-S.SNP.7:26879848 chr07:026879848 0 W/26879848-26879848 FN1080-S Single Base Substitution A-G INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN705-S.SNP.7:26885495 chr07:026885495 0 W/26885495-26885495 FN705-S Single Base Substitution A-G INTERGENIC HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN413-S.SNP.7:26893793 chr07:026893793 0 W/26893793-26893793 FN413-S Single Base Substitution G-A INTRON HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN1065-S.SNP.7:26900687 chr07:026900687 0 W/26900687-26900687 FN1065-S Single Base Substitution G-T INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2630-S.SNP.7:26906545 chr07:026906545 0 W/26906545-26906545 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.932046;DP=5450;DP4=2735,2446,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.68024e-11;MQSB=0.998807;RPB=0.705269;SGB=81.8956;VDB=0.78834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V292M|950|LOC_Os07g45074|protein_coding|CODING|LOC_Os07g45074.1|3|1) FN3815-S.SNP.7:26909102 chr07:026909102 0 W/26909102-26909102 FN3815-S SNP G -> A AC=2;AN=190;BQB=0.969299;DP=2127;DP4=1162,872,13,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.83286e-10;MQSB=0.998841;RPB=0.347372;SGB=8.77275;VDB=0.305641;EFF=INTERGENIC(MODIFIER||||||||||1) FN-42.SNP.7:26920815 chr07:026920815 0 W/26920815-26920815 FN-42 Single Base Substitution A-G INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-250.SNP.7:26922399 chr07:026922399 0 W/26922399-26922399 FN-250 Single Base Substitution G-A INTRON HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN-172.SNP.7:26924359 chr07:026924359 0 W/26924359-26924359 FN-172 Single Base Substitution T-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN-179.SNP.7:26931232 chr07:026931232 0 W/26931232-26931232 FN-179 Single Base Substitution C-T INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3105-S.SNP.7:26934533 chr07:026934533 0 W/26934533-26934533 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.100112;DP=3081;DP4=1704,1279,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.36783e-08;MQSB=0.157579;RPB=0.0638932;SGB=2.23696;VDB=0.806879;EFF=START_GAINED(LOW||||848|LOC_Os07g45120|protein_coding|CODING|LOC_Os07g45120.1|1|1),UTR_5_PRIME(MODIFIER||49||848|LOC_Os07g45120|protein_coding|CODING|LOC_Os07g45120.1|1|1) FN1660-S.SNP.7:26938426 chr07:026938426 0 W/26938426-26938426 FN1660-S Single Base Substitution G-A INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN996-S.SNP.7:26951421 chr07:026951421 0 W/26951421-26951421 FN996-S Single Base Substitution C-A INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1156-XA21.SNP.7:26954216 chr07:026954216 0 W/26954216-26954216 FN1156-XA21 Single Base Substitution C-T INTRON Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3480-S.SNP.7:26958656 chr07:026958656 0 W/26958656-26958656 FN3480-S SNP A -> G AC=1;AN=184;BQB=0.956031;DP=2450;DP4=1211,1151,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.47881e-08;MQSB=0.990877;RPB=0.371027;SGB=39.2697;VDB=0.119934;EFF=INTRON(MODIFIER||||1796|LOC_Os07g45160|protein_coding|CODING|LOC_Os07g45160.1|13|1) FN-177.SNP.7:26959170 chr07:026959170 0 W/26959170-26959170 FN-177 Single Base Substitution A-T INTRON HOMO SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN496-S.SNP.7:26959340 chr07:026959340 0 W/26959340-26959340 FN496-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g45160 SAC3/GANP family protein, expressed SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1551-S.SNP.7:26959939 chr07:026959939 0 W/26959939-26959939 FN1551-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN957-S.SNP.7:26963023 chr07:026963023 0 W/26963023-26963023 FN957-S Single Base Substitution G-A INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN806-S.SNP.7:26963169 chr07:026963169 0 W/26963169-26963169 FN806-S Single Base Substitution C-A INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN-225.SNP.7:26967696 chr07:026967696 0 W/26967696-26967696 FN-225 Single Base Substitution C-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-225.SNP.7:26967703 chr07:026967703 0 W/26967703-26967703 FN-225 Single Base Substitution A-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-225.SNP.7:26967711 chr07:026967711 0 W/26967711-26967711 FN-225 Single Base Substitution T-G INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN2412.SNP.7:26969619 chr07:026969619 0 W/26969619-26969619 FN2412 SNP T -> C AC=2;AN=200;BQB=0.954263;DP=4865;DP4=2289,2271,17,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.50428e-16;MQSB=0.907285;RPB=0.933695;SGB=33.5675;VDB=0.794383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.7:26970882 chr07:026970882 0 W/26970882-26970882 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.948225;DP=2740;DP4=1253,1402,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36593e-13;MQSB=0.958029;RPB=0.91544;SGB=89.8686;VDB=0.911323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.7:26984505 chr07:026984505 0 W/26984505-26984505 FN2645-S SNP G -> C AC=1;AN=200;BQB=0.746164;DP=4870;DP4=2359,2156,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.90421e-19;MQSB=0.989629;RPB=0.9854;SGB=65.9573;VDB=0.0899722;EFF=UTR_5_PRIME(MODIFIER||1939||134|LOC_Os07g45210|protein_coding|CODING|LOC_Os07g45210.2|1|1),UTR_5_PRIME(MODIFIER||380||166|LOC_Os07g45210|protein_coding|CODING|LOC_Os07g45210.1|1|1) FN1701-S.SNP.7:27004255 chr07:027004255 0 W/27004255-27004255 FN1701-S SNP A -> G AC=2;AN=188;BQB=0.0237991;DP=3963;DP4=2102,1807,15,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.80535e-15;MQSB=0.883119;RPB=0.192355;SGB=-4.13386;VDB=0.972733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T731A|749|LOC_Os07g45250|protein_coding|CODING|LOC_Os07g45250.1|2|1) FN2138-S.SNP.7:27013533 chr07:027013533 0 W/27013533-27013533 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.00269867;DP=3900;DP4=1883,1954,16,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.41734e-09;MQSB=0.999994;RPB=0.253906;SGB=-74.3449;VDB=0.751124;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.7:27018076 chr07:027018076 0 W/27018076-27018076 FN424-S Single Base Substitution T-C INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2780-S.SNP.7:27018725 chr07:027018725 0 W/27018725-27018725 FN2780-S SNP C -> A AC=1;AN=198;BQB=0.809955;DP=3983;DP4=1964,1832,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.81069e-07;MQSB=0.930309;RPB=0.977472;SGB=18.9639;VDB=0.117657;EFF=UTR_3_PRIME(MODIFIER||36||337|LOC_Os07g45280|protein_coding|CODING|LOC_Os07g45280.1|11|1) FN3827-S.SNP.7:27020476 chr07:027020476 0 W/27020476-27020476 FN3827-S SNP A -> T AC=1;AN=190;BQB=0.756261;DP=2689;DP4=1229,1282,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08831e-08;MQSB=0.908699;RPB=0.59003;SGB=50.3161;VDB=0.741197;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Atc|F317I|537|LOC_Os07g45290|protein_coding|CODING|LOC_Os07g45290.1|2|1) FN2157-S.SNP.7:27021735 chr07:027021735 0 W/27021735-27021735 FN2157-S SNP A -> G AC=1;AN=168;BQB=0.408288;DP=3790;DP4=1875,1862,20,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.19867e-11;MQSB=0.932094;RPB=0.628533;SGB=-110.908;VDB=0.0104493;EFF=INTRON(MODIFIER||||537|LOC_Os07g45290|protein_coding|CODING|LOC_Os07g45290.1|1|1) FN956-S.SNP.7:27026069 chr07:027026069 0 W/27026069-27026069 FN956-S Single Base Substitution G-A INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN810-S.SNP.7:27026799 chr07:027026799 0 W/27026799-27026799 FN810-S Single Base Substitution G-A INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3356-S.SNP.7:27027594 chr07:027027594 0 W/27027594-27027594 FN3356-S SNP G -> T AC=1;AN=184;BQB=0.958109;DP=2963;DP4=1264,1595,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000337496;MQB=1.40415e-05;MQSB=0.997011;RPB=0.999969;SGB=30.6558;VDB=0.983656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.7:27050739 chr07:027050739 0 W/27050739-27050739 FN2668-S SNP A -> G AC=1;AN=200;BQB=0.778183;DP=4809;DP4=2308,2275,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.47793e-18;MQSB=0.835471;RPB=0.257173;SGB=108.768;VDB=0.255664;EFF=UTR_3_PRIME(MODIFIER||552||343|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.2|12|1),UTR_3_PRIME(MODIFIER||552||343|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.1|11|1),UTR_3_PRIME(MODIFIER||552||267|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.4|12|1),UTR_3_PRIME(MODIFIER||552||238|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.5|11|1),UTR_3_PRIME(MODIFIER||1548||287|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.3|10|1) FN2426.SNP.7:27053370 chr07:027053370 0 W/27053370-27053370 FN2426 SNP A -> C AC=1;AN=200;BQB=0.737121;DP=4790;DP4=2224,2313,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48673e-13;MQSB=0.999178;RPB=0.392615;SGB=91.1059;VDB=0.0255126;EFF=INTRON(MODIFIER||||343|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.1|4|1),INTRON(MODIFIER||||343|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.2|4|1),INTRON(MODIFIER||||287|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.3|4|1),INTRON(MODIFIER||||267|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.4|5|1),INTRON(MODIFIER||||238|LOC_Os07g45350|protein_coding|CODING|LOC_Os07g45350.5|4|1) FN1273-S.SNP.7:27055014 chr07:027055014 0 W/27055014-27055014 FN1273-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN580-S.SNP.7:27060273 chr07:027060273 0 W/27060273-27060273 FN580-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2351.SNP.7:27070117 chr07:027070117 0 W/27070117-27070117 FN2351 SNP C -> T AC=1;AN=192;BQB=0.596917;DP=5051;DP4=2526,2278,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.26319e-11;MQSB=0.802859;RPB=0.974204;SGB=36.607;VDB=0.349823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L46F|2175|LOC_Os07g45400|protein_coding|CODING|LOC_Os07g45400.1|1|1) FN2153-S.SNP.7:27073489 chr07:027073489 0 W/27073489-27073489 FN2153-S SNP A -> G AC=1;AN=168;BQB=0.663626;DP=4223;DP4=2125,2050,24,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.5221e-20;MQSB=0.75836;RPB=0.858887;SGB=34.2378;VDB=0.167689;EFF=INTRON(MODIFIER||||2175|LOC_Os07g45400|protein_coding|CODING|LOC_Os07g45400.1|3|1) FN553-S.SNP.7:27074756 chr07:027074756 0 W/27074756-27074756 FN553-S Single Base Substitution T-A INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN666-S.SNP.7:27080272 chr07:027080272 0 W/27080272-27080272 FN666-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g45400 expressed protein SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3760-S.SNP.7:27081899 chr07:027081899 0 W/27081899-27081899 FN3760-S SNP C -> A AC=2;AN=190;BQB=0.830196;DP=2460;DP4=980,1256,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000406504;MQB=1.72928e-08;MQSB=0.775973;RPB=0.999341;SGB=41.5369;VDB=0.0146152;EFF=INTRON(MODIFIER||||2175|LOC_Os07g45400|protein_coding|CODING|LOC_Os07g45400.1|12|1) FN1106-S.SNP.7:27081901 chr07:027081901 0 W/27081901-27081901 FN1106-S Single Base Substitution A-C INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN928-S.SNP.7:27081901 chr07:027081901 0 W/27081901-27081901 FN928-S Single Base Substitution A-C INTRON HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN1057-S.SNP.7:27086835 chr07:027086835 0 W/27086835-27086835 FN1057-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1379-S.SNP.7:27090740 chr07:027090740 0 W/27090740-27090740 FN1379-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os07g45410 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN464-S.SNP.7:27090933 chr07:027090933 0 W/27090933-27090933 FN464-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. 703-4.SNP.7:27094767 chr07:027094767 0 W/27094767-27094767 703-4 Single Base Substitution T-A INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2497.SNP.7:27095893 chr07:027095893 0 W/27095893-27095893 FN2497 SNP C -> G AC=2;AN=200;BQB=0.99357;DP=4717;DP4=2490,1933,25,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000211999;MQB=6.76883e-22;MQSB=0.992444;RPB=0.98683;SGB=-44.3966;VDB=0.402416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2357.SNP.7:27107021 chr07:027107021 0 W/27107021-27107021 FN2357 SNP G -> T AC=2;AN=192;BQB=0.60818;DP=5314;DP4=2528,2289,33,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.77241e-34;MQSB=0.733968;RPB=0.994371;SGB=11.7557;VDB=0.854675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.7:27108959 chr07:027108959 0 W/27108959-27108959 FN2550-S SNP G -> T AC=1;AN=198;BQB=0.926375;DP=4314;DP4=2032,2040,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000805881;MQSB=0.829551;RPB=0.561527;SGB=14.9842;VDB=0.326789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.7:27111278 chr07:027111278 0 W/27111278-27111278 FN2668-S SNP G -> T AC=1;AN=200;BQB=0.978012;DP=4830;DP4=2115,2498,14,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00269151;MQB=2.36013e-09;MQSB=0.687409;RPB=0.168886;SGB=109.527;VDB=0.742254;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E207*|325|LOC_Os07g45450|protein_coding|CODING|LOC_Os07g45450.1|3|1) FN2340.SNP.7:27125836 chr07:027125836 0 W/27125836-27125836 FN2340 SNP G -> C AC=1;AN=192;BQB=0.940597;DP=4771;DP4=2533,1958,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.10453e-12;MQSB=0.996178;RPB=0.951213;SGB=59.6861;VDB=0.847408;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.7:27137151 chr07:027137151 0 W/27137151-27137151 FN2609-S SNP T -> C AC=2;AN=198;BQB=0.999635;DP=4265;DP4=2108,1923,33,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.01026e-31;MQSB=0.959734;RPB=0.139951;SGB=180.359;VDB=0.743473;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F737|901|LOC_Os07g45480|protein_coding|CODING|LOC_Os07g45480.1|5|1) 703-4.SNP.7:27139087 chr07:027139087 0 W/27139087-27139087 703-4 Single Base Substitution A-C INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2259-S.SNP.7:27152283 chr07:027152283 0 W/27152283-27152283 FN2259-S SNP G -> A AC=1;AN=190;BQB=0.580979;DP=4693;DP4=2324,2027,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.43906e-08;MQSB=0.914007;RPB=0.334989;SGB=11.8805;VDB=0.159721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G431E|964|LOC_Os07g45510|protein_coding|CODING|LOC_Os07g45510.1|2|1) FN3287-S.SNP.7:27155914 chr07:027155914 0 W/27155914-27155914 FN3287-S SNP G -> C AC=1;AN=184;BQB=0.846529;DP=2767;DP4=1086,1547,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.73752e-12;MQSB=0.530836;RPB=0.543785;SGB=60.4004;VDB=0.294665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.7:27178423 chr07:027178423 0 W/27178423-27178423 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.951266;DP=5231;DP4=2429,2465,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04595e-06;MQSB=0.888566;RPB=0.61879;SGB=18.552;VDB=0.484574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.7:27179346 chr07:027179346 0 W/27179346-27179346 FN2597-S SNP G -> T AC=1;AN=198;BQB=0.509546;DP=4541;DP4=2342,1912,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07067e-08;MQSB=0.98586;RPB=0.40916;SGB=-12.6455;VDB=0.463208;EFF=INTRON(MODIFIER||||1825|LOC_Os07g45560|protein_coding|CODING|LOC_Os07g45560.1|1|1) FN-240.SNP.7:27181711 chr07:027181711 0 W/27181711-27181711 FN-240 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN-151.SNP.7:27193591 chr07:027193591 0 W/27193591-27193591 FN-151 Single Base Substitution G-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2181-S.SNP.7:27198245 chr07:027198245 0 W/27198245-27198245 FN2181-S SNP C -> A AC=2;AN=190;BQB=0.445953;DP=5038;DP4=2329,2351,20,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.38076e-23;MQSB=0.97033;RPB=0.68196;SGB=-105.149;VDB=0.239408;EFF=INTRON(MODIFIER||||955|LOC_Os07g45570|protein_coding|CODING|LOC_Os07g45570.1|1|1) FN3664-S.SNP.7:27208430 chr07:027208430 0 W/27208430-27208430 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.989183;DP=2946;DP4=1413,1420,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.020706;MQB=0.0101762;MQSB=0.00331456;RPB=0.1013;SGB=58.2031;VDB=0.941424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN1152-S Single Base Substitution T-C INTRON HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1639-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN1639-S Single Base Substitution T-C INTRON Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3846-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN3846-S SNP T -> C AC=2;AN=190;BQB=0.718471;DP=2694;DP4=1489,900,9,14;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.00148478;MQB=0.214787;MQSB=4.30575e-20;RPB=0.817995;SGB=-11.0065;VDB=0.721272;EFF=INTRON(MODIFIER||||1810|LOC_Os07g45610|protein_coding|CODING|LOC_Os07g45610.1|1|1) FN3976-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN3976-S SNP T -> C AC=2;AN=168;BQB=0.793843;DP=2072;DP4=1110,697,13,12;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0019305;MQB=0.204257;MQSB=1.20227e-09;RPB=0.104377;SGB=-12.3568;VDB=0.00741653;EFF=INTRON(MODIFIER||||1810|LOC_Os07g45610|protein_coding|CODING|LOC_Os07g45610.1|1|1) FN440-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN440-S Single Base Substitution T-C INTRON HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN633-S.SNP.7:27218674 chr07:027218674 0 W/27218674-27218674 FN633-S Single Base Substitution T-C INTRON HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1152-S.SNP.7:27218822 chr07:027218822 0 W/27218822-27218822 FN1152-S Single Base Substitution A-G INTRON HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2639-S.SNP.7:27218822 chr07:027218822 0 W/27218822-27218822 FN2639-S SNP A -> G AC=2;AN=200;BQB=0.00183509;DP=4468;DP4=2102,1647,18,41;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00470009;MQB=3.02173e-32;MQSB=0.627336;RPB=0.987807;SGB=-747.662;VDB=4.02248e-05;EFF=INTRON(MODIFIER||||1810|LOC_Os07g45610|protein_coding|CODING|LOC_Os07g45610.1|1|1) FN440-S.SNP.7:27218822 chr07:027218822 0 W/27218822-27218822 FN440-S Single Base Substitution A-G INTRON HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN633-S.SNP.7:27218822 chr07:027218822 0 W/27218822-27218822 FN633-S Single Base Substitution A-G INTRON HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1152-S.SNP.7:27218830 chr07:027218830 0 W/27218830-27218830 FN1152-S Single Base Substitution C-T INTRON HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2639-S.SNP.7:27218830 chr07:027218830 0 W/27218830-27218830 FN2639-S SNP C -> T AC=2;AN=200;BQB=0.231168;DP=4516;DP4=2245,1906,3,30;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00487157;MQB=1.70008e-16;MQSB=0.00655947;RPB=0.99513;SGB=-4.03268;VDB=0.41335;EFF=INTRON(MODIFIER||||1810|LOC_Os07g45610|protein_coding|CODING|LOC_Os07g45610.1|1|1) FN633-S.SNP.7:27218830 chr07:027218830 0 W/27218830-27218830 FN633-S Single Base Substitution C-T INTRON HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN897-S.SNP.7:27228748 chr07:027228748 0 W/27228748-27228748 FN897-S Single Base Substitution T-G INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2449.SNP.7:27230436 chr07:027230436 0 W/27230436-27230436 FN2449 SNP C -> T AC=1;AN=200;BQB=0.831596;DP=3795;DP4=1570,1987,11,9;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0189723;MQB=0.568468;MQSB=0;RPB=0.703385;SGB=86.5007;VDB=0.670683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.7:27232802 chr07:027232802 0 W/27232802-27232802 FN2182-S SNP C -> G AC=1;AN=190;BQB=0.455912;DP=5315;DP4=2528,2486,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09405e-06;MQSB=0.00697658;RPB=0.093566;SGB=44.5415;VDB=0.329216;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.7:27233771 chr07:027233771 0 W/27233771-27233771 FN-8 Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN2160-S.SNP.7:27237210 chr07:027237210 0 W/27237210-27237210 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.81378;DP=3724;DP4=1970,1713,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00107411;MQB=4.11112e-11;MQSB=0.944455;RPB=0.951356;SGB=-40.6433;VDB=0.412233;EFF=INTRON(MODIFIER||||1539|LOC_Os07g45620|protein_coding|CODING|LOC_Os07g45620.1|5|1) FN426-S.SNP.7:27238232 chr07:027238232 0 W/27238232-27238232 FN426-S Single Base Substitution C-T INTRON HET SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN367-S.SNP.7:27243570 chr07:027243570 0 W/27243570-27243570 FN367-S Single Base Substitution G-T INTERGENIC HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN2213-S.SNP.7:27246885 chr07:027246885 0 W/27246885-27246885 FN2213-S SNP A -> G AC=1;AN=190;BQB=0.320394;DP=4649;DP4=1909,1998,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.50009e-13;MQSB=0.964988;RPB=0.706792;SGB=-11.0065;VDB=0.166684;EFF=INTRON(MODIFIER||||684|LOC_Os07g45630|protein_coding|CODING|LOC_Os07g45630.1|1|1) FN3365-S.SNP.7:27247422 chr07:027247422 0 W/27247422-27247422 FN3365-S SNP C -> A AC=2;AN=184;BQB=0.98203;DP=2936;DP4=1394,1397,23,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.15674e-21;MQSB=0.998901;RPB=0.838302;SGB=184.396;VDB=0.208602;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S2|684|LOC_Os07g45630|protein_coding|CODING|LOC_Os07g45630.1|1|1) FN3923-S.SNP.7:27252853 chr07:027252853 0 W/27252853-27252853 FN3923-S SNP C -> G AC=1;AN=158;BQB=0.948235;DP=2441;DP4=1064,1285,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000409668;MQB=4.16409e-05;MQSB=0.804401;RPB=0.161828;SGB=47.0672;VDB=0.0173969;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.7:27255463 chr07:027255463 0 W/27255463-27255463 FN3540-S SNP G -> A AC=1;AN=188;BQB=0.825105;DP=4304;DP4=2175,2048,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.100604;MQB=0.811274;MQSB=0.669889;RPB=0.279844;SGB=53.5223;VDB=0.310283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S22N|1988|LOC_Os07g45650|protein_coding|CODING|LOC_Os07g45650.1|1|1) FN1483-S.SNP.7:27261584 chr07:027261584 0 W/27261584-27261584 FN1483-S Single Base Substitution C-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1411-S.SNP.7:27265306 chr07:027265306 0 W/27265306-27265306 FN1411-S Single Base Substitution T-C INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN669-S.SNP.7:27266193 chr07:027266193 0 W/27266193-27266193 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3368-S.SNP.7:27266278 chr07:027266278 0 W/27266278-27266278 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.0962729;DP=2981;DP4=1423,1416,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00643016;MQSB=0.00015212;RPB=0.183712;SGB=0.715177;VDB=0.536049;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.7:27266699 chr07:027266699 0 W/27266699-27266699 FN-350 Single Base Substitution G-A INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-350.SNP.7:27266704 chr07:027266704 0 W/27266704-27266704 FN-350 Single Base Substitution A-C INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN3823-S.SNP.7:27268880 chr07:027268880 0 W/27268880-27268880 FN3823-S SNP G -> A AC=2;AN=190;BQB=0.991219;DP=2628;DP4=1361,1123,23,12;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.167047;MQB=0.17414;MQSB=0.000699858;RPB=0.353326;SGB=153.834;VDB=0.59825;EFF=INTRON(MODIFIER||||462|LOC_Os07g45670|protein_coding|CODING|LOC_Os07g45670.1|3|1) FN2621-S.SNP.7:27268882 chr07:027268882 0 W/27268882-27268882 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.171769;DP=4531;DP4=2332,1891,18,13;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.160892;MQB=0.990133;MQSB=0;RPB=0.96786;SGB=137.158;VDB=0.657824;EFF=INTRON(MODIFIER||||462|LOC_Os07g45670|protein_coding|CODING|LOC_Os07g45670.1|3|1) FN3858-S.SNP.7:27275221 chr07:027275221 0 W/27275221-27275221 FN3858-S SNP C -> A AC=1;AN=158;BQB=0.993323;DP=2591;DP4=1306,1202,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00192976;MQB=4.69438e-06;MQSB=0.627197;RPB=0.487471;SGB=34.0735;VDB=0.389824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T730K|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|2|1) FN1064-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN1064-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2130-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.467317;DP=3652;DP4=2111,1491,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.235487;MQB=0.764163;MQSB=0.0189053;RPB=0.839202;SGB=1.32907;VDB=0.847865;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1165|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN2600-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN2600-S SNP G -> A AC=1;AN=198;BQB=0.695452;DP=4860;DP4=2680,1942,17,16;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0271605;MQB=2.30806e-06;MQSB=3.94556e-16;RPB=0.999947;SGB=146.046;VDB=0.789057;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1165|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN3324-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN3324-S SNP G -> A AC=1;AN=184;BQB=0.93897;DP=4613;DP4=2565,1909,20,15;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0318665;MQB=1.79981e-05;MQSB=1.06872e-18;RPB=0.464442;SGB=152.744;VDB=0.123644;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1165|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN3696-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.995656;DP=3964;DP4=2167,1649,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0355701;MQB=0.000726139;MQSB=5.27607e-14;RPB=0.961764;SGB=82.301;VDB=0.182158;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1165|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN3896-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN3896-S SNP G -> A AC=1;AN=158;BQB=0.781075;DP=3562;DP4=1942,1478,19,11;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0387423;MQB=0.000442951;MQSB=9.99793e-15;RPB=0.291043;SGB=125.717;VDB=0.0994865;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1165|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN750-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN750-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN862-S.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN862-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN_809-6-1.SNP.7:27276651 chr07:027276651 0 W/27276651-27276651 FN_809-6-1 Single Base Substitution G-A HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN765-S.SNP.7:27278736 chr07:027278736 0 W/27278736-27278736 FN765-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3926-S.SNP.7:27278854 chr07:027278854 0 W/27278854-27278854 FN3926-S SNP C -> T AC=1;AN=158;BQB=0.94593;DP=3747;DP4=1725,1905,13,14;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.0688551;MQB=0.0793929;MQSB=0.0755502;RPB=0.0349315;SGB=-106.933;VDB=0.850023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1900C|1969|LOC_Os07g45680|protein_coding|CODING|LOC_Os07g45680.1|4|1) FN3829-S.SNP.7:27291811 chr07:027291811 0 W/27291811-27291811 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.822963;DP=3333;DP4=1643,1560,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0183018;MQB=0.000389651;MQSB=0.316851;RPB=0.993798;SGB=94.6341;VDB=0.557654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R381C|781|LOC_Os07g45710|protein_coding|CODING|LOC_Os07g45710.1|2|1) FN976-S.SNP.7:27292510 chr07:027292510 0 W/27292510-27292510 FN976-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1321-S.SNP.7:27293946 chr07:027293946 0 W/27293946-27293946 FN1321-S Single Base Substitution C-T INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1097-S.SNP.7:27294053 chr07:027294053 0 W/27294053-27294053 FN1097-S Single Base Substitution T-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1048-S.SNP.7:27294492 chr07:027294492 0 W/27294492-27294492 FN1048-S Single Base Substitution C-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1272-S.SNP.7:27294551 chr07:027294551 0 W/27294551-27294551 FN1272-S Single Base Substitution C-T INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2185-S.SNP.7:27295287 chr07:027295287 0 W/27295287-27295287 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.990589;DP=4107;DP4=1740,2029,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000243487;MQB=5.95254e-11;MQSB=0.972394;RPB=0.457906;SGB=60.9777;VDB=0.384967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.7:27308020 chr07:027308020 0 W/27308020-27308020 FN2411 SNP G -> A AC=1;AN=200;BQB=0.345973;DP=4850;DP4=2168,2409,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.87608e-18;MQSB=0.591655;RPB=0.928806;SGB=115.978;VDB=0.589386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G31D|171|LOC_Os07g45740|protein_coding|CODING|LOC_Os07g45740.1|1|1) FN1399-S.SNP.7:27309783 chr07:027309783 0 W/27309783-27309783 FN1399-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g45750 retrotransposon protein, putative, unclassified, expressed SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1288-S.SNP.7:27313404 chr07:027313404 0 W/27313404-27313404 FN1288-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g45750 retrotransposon protein, putative, unclassified, expressed SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN2788-S.SNP.7:27319633 chr07:027319633 0 W/27319633-27319633 FN2788-S SNP A -> G AC=1;AN=198;BQB=0.89136;DP=4364;DP4=2047,2124,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000229148;MQB=4.09845e-18;MQSB=0.78798;RPB=0.0683671;SGB=30.086;VDB=0.268506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I388V|663|LOC_Os07g45760|protein_coding|CODING|LOC_Os07g45760.1|4|1) FN1521-S.SNP.7:27319728 chr07:027319728 0 W/27319728-27319728 FN1521-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3411-S.SNP.7:27327489 chr07:027327489 0 W/27327489-27327489 FN3411-S SNP T -> A AC=1;AN=184;BQB=0.963003;DP=3276;DP4=1458,1706,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2031e-10;MQSB=0.917789;RPB=0.948835;SGB=71.3514;VDB=0.774388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.7:27329104 chr07:027329104 0 W/27329104-27329104 FN2155-S SNP T -> A AC=2;AN=168;BQB=0.428162;DP=4040;DP4=2094,1869,24,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.15738e-20;MQSB=0.994538;RPB=0.567495;SGB=-53.7345;VDB=0.665837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.7:27346487 chr07:027346487 0 W/27346487-27346487 FN1744-S SNP G -> A AC=1;AN=188;BQB=0.376075;DP=2680;DP4=1267,1379,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00783582;MQB=0.000300274;MQSB=0.528602;RPB=0.97698;SGB=-35.9944;VDB=0.572828;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.7:27350841 chr07:027350841 0 W/27350841-27350841 FN982-S Single Base Substitution G-A INTRON HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2310.SNP.7:27352032 chr07:027352032 0 W/27352032-27352032 FN2310 SNP G -> A AC=2;AN=192;BQB=0.484103;DP=5633;DP4=2360,2914,29,32;HOB=0.0206163;ICB=0.494846;MQ=29;MQ0F=0.199006;MQB=0.869241;MQSB=0;RPB=0.952125;SGB=141.745;VDB=0.0350593;EFF=INTRON(MODIFIER||||1543|LOC_Os07g45830|protein_coding|CODING|LOC_Os07g45830.1|2|1) FN1200-S.SNP.7:27358506 chr07:027358506 0 W/27358506-27358506 FN1200-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g45840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1275-S.SNP.7:27358506 chr07:027358506 0 W/27358506-27358506 FN1275-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g45840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2275-S.SNP.7:27358506 chr07:027358506 0 W/27358506-27358506 FN2275-S SNP C -> T AC=2;AN=190;BQB=0.0104599;DP=3798;DP4=1390,1764,30,44;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.00579252;MQB=0.0720755;MQSB=1.33445e-10;RPB=0.416762;SGB=242.804;VDB=0.0375114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R40C|141|LOC_Os07g45840|protein_coding|CODING|LOC_Os07g45840.1|1|1) FN3790-S.SNP.7:27358506 chr07:027358506 0 W/27358506-27358506 FN3790-S SNP C -> T AC=1;AN=190;BQB=0.992687;DP=3047;DP4=1052,1883,2,11;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.00525107;MQB=0.823806;MQSB=0.124529;RPB=1;SGB=53.6492;VDB=0.558785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R40C|141|LOC_Os07g45840|protein_coding|CODING|LOC_Os07g45840.1|1|1) FN907-S.SNP.7:27358506 chr07:027358506 0 W/27358506-27358506 FN907-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g45840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN631-S.SNP.7:27359801 chr07:027359801 0 W/27359801-27359801 FN631-S Single Base Substitution C-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1250-S.SNP.7:27361661 chr07:027361661 0 W/27361661-27361661 FN1250-S Single Base Substitution G-A INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN4072-S.SNP.7:27369093 chr07:027369093 0 W/27369093-27369093 FN4072-S SNP A -> G AC=1;AN=180;BQB=0.0939935;DP=2842;DP4=1271,1489,9,5;HOB=6.17284e-05;ICB=0.000124143;MQ=46;MQ0F=0.0102041;MQB=9.83352e-07;MQSB=2.26394e-05;RPB=0.00279455;SGB=-34.8828;VDB=0.0525308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.7:27370944 chr07:027370944 0 W/27370944-27370944 FN3639-S SNP G -> T AC=1;AN=190;BQB=0.753103;DP=2974;DP4=1396,1450,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.033961;MQB=0.0011874;MQSB=8.1507e-06;RPB=0.374362;SGB=50.3161;VDB=0.0598655;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.7:27377081 chr07:027377081 0 W/27377081-27377081 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.883582;DP=4777;DP4=2310,2174,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75521e-13;MQSB=0.994139;RPB=0.949026;SGB=91.1059;VDB=0.0164033;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P462L|898|LOC_Os07g45880|protein_coding|CODING|LOC_Os07g45880.1|4|1) FN771-S.SNP.7:27378470 chr07:027378470 0 W/27378470-27378470 FN771-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g45880 retrotransposon protein, putative, unclassified, expressed SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1012-S.SNP.7:27381689 chr07:027381689 0 W/27381689-27381689 FN1012-S Single Base Substitution T-A STOP_GAINED HET LOC_Os07g45890 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1314-S.SNP.7:27413849 chr07:027413849 0 W/27413849-27413849 FN1314-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN3601-S.SNP.7:27413849 chr07:027413849 0 W/27413849-27413849 FN3601-S SNP G -> A AC=1;AN=190;BQB=0.951101;DP=2519;DP4=1214,1195,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.092497;MQB=0.973296;MQSB=1.73132e-40;RPB=0.912065;SGB=30.8803;VDB=0.547491;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L1752|1943|LOC_Os07g45940|protein_coding|CODING|LOC_Os07g45940.1|2|1) FN506-S.SNP.7:27413849 chr07:027413849 0 W/27413849-27413849 FN506-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN3309-S.SNP.7:27416030 chr07:027416030 0 W/27416030-27416030 FN3309-S SNP T -> A AC=1;AN=184;BQB=0.974932;DP=4141;DP4=1900,1958,102,10;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.269017;MQB=3.37285e-25;MQSB=0;RPB=0.404246;SGB=-1829.81;VDB=0.0855993;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K1025*|1943|LOC_Os07g45940|protein_coding|CODING|LOC_Os07g45940.1|2|1) FN1630-S.SNP.7:27439607 chr07:027439607 0 W/27439607-27439607 FN1630-S Single Base Substitution T-G INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN887-S.SNP.7:27443068 chr07:027443068 0 W/27443068-27443068 FN887-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2386.SNP.7:27444984 chr07:027444984 0 W/27444984-27444984 FN2386 SNP G -> A AC=2;AN=192;BQB=0.987537;DP=5085;DP4=2403,2266,29,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.0311e-28;MQSB=0.907769;RPB=0.445865;SGB=121.23;VDB=0.311838;EFF=INTRON(MODIFIER||||1119|LOC_Os07g45990|protein_coding|CODING|LOC_Os07g45990.1|4|1) FN4135-S.SNP.7:27450706 chr07:027450706 0 W/27450706-27450706 FN4135-S SNP G -> C AC=2;AN=182;BQB=0.985006;DP=2811;DP4=1321,1391,14,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.74487e-14;MQSB=0.740229;RPB=0.88331;SGB=67.2255;VDB=0.786108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S410T|562|LOC_Os07g46000|protein_coding|CODING|LOC_Os07g46000.1|4|1) FN1162-S.SNP.7:27455936 chr07:027455936 0 W/27455936-27455936 FN1162-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1162-S.SNP.7:27455940 chr07:027455940 0 W/27455940-27455940 FN1162-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN2417.SNP.7:27471541 chr07:027471541 0 W/27471541-27471541 FN2417 SNP A -> T AC=2;AN=200;BQB=0.699291;DP=4902;DP4=2241,2299,17,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.28053e-25;MQSB=0.617746;RPB=0.830916;SGB=56.0399;VDB=0.477522;EFF=INTRON(MODIFIER||||970|LOC_Os07g46030|protein_coding|CODING|LOC_Os07g46030.1|2|1) FN2251-S.SNP.7:27476000 chr07:027476000 0 W/27476000-27476000 FN2251-S SNP A -> G AC=2;AN=190;BQB=0.87202;DP=4837;DP4=2277,2226,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.21337e-13;MQSB=0.999222;RPB=0.867283;SGB=41.5369;VDB=0.886772;EFF=UTR_3_PRIME(MODIFIER||823||109|LOC_Os07g46039|protein_coding|CODING|LOC_Os07g46039.1|3|1),UTR_3_PRIME(MODIFIER||823||109|LOC_Os07g46039|protein_coding|CODING|LOC_Os07g46039.2|3|1) FN2404.SNP.7:27476431 chr07:027476431 0 W/27476431-27476431 FN2404 SNP G -> A AC=1;AN=200;BQB=0.54674;DP=4535;DP4=1977,2230,20,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220507;MQB=7.46609e-22;MQSB=0.887963;RPB=0.976285;SGB=0.203511;VDB=0.479557;EFF=UTR_3_PRIME(MODIFIER||392||109|LOC_Os07g46039|protein_coding|CODING|LOC_Os07g46039.1|3|1),UTR_3_PRIME(MODIFIER||392||109|LOC_Os07g46039|protein_coding|CODING|LOC_Os07g46039.2|3|1) FN2691-S.SNP.7:27480707 chr07:027480707 0 W/27480707-27480707 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.741294;DP=4653;DP4=2202,2131,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.97333e-11;MQSB=0.908648;RPB=0.431213;SGB=65.5058;VDB=0.877523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.7:27485366 chr07:027485366 0 W/27485366-27485366 FN3662-S SNP T -> C AC=2;AN=190;BQB=0.98675;DP=2973;DP4=1417,1437,11,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.26571e-11;MQSB=0.998626;RPB=0.954859;SGB=85.5263;VDB=0.947154;EFF=INTERGENIC(MODIFIER||||||||||1) FN531-S.SNP.7:27485541 chr07:027485541 0 W/27485541-27485541 FN531-S Single Base Substitution T-C INTERGENIC HET SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN1614-S.SNP.7:27488890 chr07:027488890 0 W/27488890-27488890 FN1614-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os07g46060 expressed protein SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2459.SNP.7:27493110 chr07:027493110 0 W/27493110-27493110 FN2459 SNP G -> A AC=1;AN=200;BQB=0.020775;DP=4114;DP4=1721,2142,4,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00875061;MQB=0.00363567;MQSB=1.23679e-22;RPB=0.9943;SGB=68.0801;VDB=0.792573;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.7:27501365 chr07:027501365 0 W/27501365-27501365 FN4111-S SNP T -> C AC=1;AN=182;BQB=0.952442;DP=3112;DP4=1418,1610,14,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.99492e-18;MQSB=0.927259;RPB=0.593366;SGB=102.334;VDB=0.277681;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.7:27502423 chr07:027502423 0 W/27502423-27502423 FN788-S Single Base Substitution G-A INTRON HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN852-S.SNP.7:27504762 chr07:027504762 0 W/27504762-27504762 FN852-S Single Base Substitution C-T INTRON HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN266-S.SNP.7:27508347 chr07:027508347 0 W/27508347-27508347 FN266-S Single Base Substitution T-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. W674-4-1.SNP.7:27509413 chr07:027509413 0 W/27509413-27509413 W674-4-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. W674-4-1.SNP.7:27509415 chr07:027509415 0 W/27509415-27509415 W674-4-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. W674-4-1.SNP.7:27509416 chr07:027509416 0 W/27509416-27509416 W674-4-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2497.SNP.7:27537680 chr07:027537680 0 W/27537680-27537680 FN2497 SNP G -> A AC=2;AN=200;BQB=0.676594;DP=4549;DP4=2045,2256,13,15;HOB=0.0198;ICB=0.495051;MQ=33;MQ0F=0.0173665;MQB=0.144812;MQSB=1.43284e-17;RPB=0.933054;SGB=123.342;VDB=0.879194;EFF=INTRON(MODIFIER||||1557|LOC_Os07g46140|protein_coding|CODING|LOC_Os07g46140.1|2|1) FN3438-S.SNP.7:27541109 chr07:027541109 0 W/27541109-27541109 FN3438-S SNP C -> A AC=1;AN=184;BQB=0.994668;DP=6758;DP4=4217,2382,15,11;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.0525303;MQB=0.0522959;MQSB=0;RPB=0.179976;SGB=81.5311;VDB=0.376491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T1286N|1557|LOC_Os07g46140|protein_coding|CODING|LOC_Os07g46140.1|9|1) FN2696-S.SNP.7:27542539 chr07:027542539 0 W/27542539-27542539 FN2696-S SNP A -> G AC=1;AN=200;BQB=0.885493;DP=5058;DP4=1974,2893,5,10;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.057928;MQB=0.964164;MQSB=3.71023e-08;RPB=0.510981;SGB=43.8747;VDB=0.959798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.7:27544039 chr07:027544039 0 W/27544039-27544039 FN3360-S SNP G -> T AC=1;AN=184;BQB=0.803515;DP=3467;DP4=1219,2162,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30573e-06;MQSB=0.849149;RPB=0.999901;SGB=53.2642;VDB=0.409779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.7:27547363 chr07:027547363 0 W/27547363-27547363 FN2657-S SNP C -> A AC=2;AN=200;BQB=0.621303;DP=4824;DP4=2318,2189,18,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.18284e-27;MQSB=0.855787;RPB=0.851748;SGB=152.03;VDB=0.57696;EFF=INTRON(MODIFIER||||434|LOC_Os07g46160|protein_coding|CODING|LOC_Os07g46160.1|1|1) W472-5-1.SNP.7:27554328 chr07:027554328 0 W/27554328-27554328 W472-5-1 Single Base Substitution A-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3881-S.SNP.7:27557505 chr07:027557505 0 W/27557505-27557505 FN3881-S SNP G -> A AC=1;AN=158;BQB=0.474475;DP=2545;DP4=1264,1198,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.95472e-06;MQSB=0.988221;RPB=0.524486;SGB=16.7104;VDB=0.895928;EFF=INTRON(MODIFIER||||1447|LOC_Os07g46180|protein_coding|CODING|LOC_Os07g46180.1|1|1) FN3881-S.SNP.7:27557506 chr07:027557506 0 W/27557506-27557506 FN3881-S SNP G -> A AC=1;AN=158;BQB=0.740594;DP=2535;DP4=1251,1189,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.69726e-06;MQSB=0.982927;RPB=0.835761;SGB=30.704;VDB=0.9958;EFF=INTRON(MODIFIER||||1447|LOC_Os07g46180|protein_coding|CODING|LOC_Os07g46180.1|1|1) FN996-S.SNP.7:27565090 chr07:027565090 0 W/27565090-27565090 FN996-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1265-S.SNP.7:27576931 chr07:027576931 0 W/27576931-27576931 FN1265-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1685-S.SNP.7:27576931 chr07:027576931 0 W/27576931-27576931 FN1685-S SNP A -> T AC=1;AN=188;BQB=0.936211;DP=3629;DP4=1333,2262,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.96e-10;MQSB=0.930105;RPB=0.834519;SGB=33.7061;VDB=0.692706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:27576931 chr07:027576931 0 W/27576931-27576931 FN2218-S SNP A -> T AC=1;AN=190;BQB=0.967845;DP=4910;DP4=1951,2768,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63183e-14;MQSB=0.989097;RPB=0.700679;SGB=51.7524;VDB=0.139872;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.7:27576931 chr07:027576931 0 W/27576931-27576931 FN691-S Single Base Substitution A-T INTERGENIC HOMO SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2537-S.SNP.7:27580146 chr07:027580146 0 W/27580146-27580146 FN2537-S SNP A -> T AC=1;AN=198;BQB=0.251658;DP=4499;DP4=2091,2149,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17994e-08;MQSB=0.992674;RPB=0.88449;SGB=-0.221308;VDB=0.302434;EFF=INTRON(MODIFIER||||269|LOC_Os07g46220|protein_coding|CODING|LOC_Os07g46220.1|1|1) FN2537-S.SNP.7:27580150 chr07:027580150 0 W/27580150-27580150 FN2537-S SNP T -> G AC=1;AN=198;BQB=0.955225;DP=4518;DP4=2130,2214,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.45676e-06;MQSB=0.9884;RPB=0.996999;SGB=35.7638;VDB=0.464746;EFF=INTRON(MODIFIER||||269|LOC_Os07g46220|protein_coding|CODING|LOC_Os07g46220.1|1|1) W464-2-1.SNP.7:27581095 chr07:027581095 0 W/27581095-27581095 W464-2-1 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2670-S.SNP.7:27582914 chr07:027582914 0 W/27582914-27582914 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.877741;DP=4984;DP4=2500,2219,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19648e-13;MQSB=0.976395;RPB=0.488398;SGB=39.9056;VDB=0.11625;EFF=INTRON(MODIFIER||||269|LOC_Os07g46220|protein_coding|CODING|LOC_Os07g46220.1|6|1) FN859-S.SNP.7:27586274 chr07:027586274 0 W/27586274-27586274 FN859-S Single Base Substitution G-T INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1535-S.SNP.7:27588474 chr07:027588474 0 W/27588474-27588474 FN1535-S Single Base Substitution C-A INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN2596-S.SNP.7:27590114 chr07:027590114 0 W/27590114-27590114 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.877501;DP=4144;DP4=1843,1959,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.0495604;MQSB=0.000120899;RPB=0.913021;SGB=35.7638;VDB=0.560036;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.7:27594717 chr07:027594717 0 W/27594717-27594717 FN1740-S SNP G -> A AC=1;AN=188;BQB=0.00593293;DP=3647;DP4=1817,1786,7,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.56989e-07;MQSB=0.986508;RPB=0.98595;SGB=-255.616;VDB=0.054987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.7:27599454 chr07:027599454 0 W/27599454-27599454 FN2268-S SNP G -> A AC=2;AN=190;BQB=0.0854291;DP=4605;DP4=2229,1992,28,27;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0323561;MQB=0.0010476;MQSB=1.93293e-31;RPB=0.793998;SGB=-112.38;VDB=0.115945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G319E|811|LOC_Os07g46250|protein_coding|CODING|LOC_Os07g46250.1|2|1) FN3594-S.SNP.7:27612049 chr07:027612049 0 W/27612049-27612049 FN3594-S SNP C -> T AC=2;AN=188;BQB=0.778265;DP=4465;DP4=1991,2358,24,15;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.0450168;MQB=0.124106;MQSB=1.55704e-07;RPB=0.589958;SGB=171.648;VDB=0.986513;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R384Q|982|LOC_Os07g46270|protein_coding|CODING|LOC_Os07g46270.1|1|1) FN863-S.SNP.7:27623128 chr07:027623128 0 W/27623128-27623128 FN863-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g46300 expressed protein SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2456.SNP.7:27623248 chr07:027623248 0 W/27623248-27623248 FN2456 SNP T -> C AC=1;AN=200;BQB=0.496429;DP=4997;DP4=2456,2255,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34798e-08;MQSB=0.957504;RPB=0.494759;SGB=68.0801;VDB=0.528889;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tCg|L675S|730|LOC_Os07g46300|protein_coding|CODING|LOC_Os07g46300.1|3|1) FN3316-S.SNP.7:27628643 chr07:027628643 0 W/27628643-27628643 FN3316-S SNP C -> A AC=1;AN=184;BQB=0.818856;DP=3880;DP4=1552,2198,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.76984e-05;MQSB=0.874642;RPB=0.999226;SGB=28.7043;VDB=0.517147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P85T|266|LOC_Os07g46320|protein_coding|CODING|LOC_Os07g46320.1|1|1) FN698-S.SNP.7:27629743 chr07:027629743 0 W/27629743-27629743 FN698-S Single Base Substitution G-A SYNONYMOUS_STOP HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN865-S.SNP.7:27632622 chr07:027632622 0 W/27632622-27632622 FN865-S Single Base Substitution A-T INTRON HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1195-S.SNP.7:27634002 chr07:027634002 0 W/27634002-27634002 FN1195-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1195-S.SNP.7:27634009 chr07:027634009 0 W/27634009-27634009 FN1195-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3657-S.SNP.7:27636899 chr07:027636899 0 W/27636899-27636899 FN3657-S SNP T -> C AC=2;AN=190;BQB=0.941388;DP=2829;DP4=1456,1248,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47461e-12;MQSB=0.968946;RPB=0.108658;SGB=78.7471;VDB=0.597686;EFF=INTRON(MODIFIER||||309|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.1|1|1),INTRON(MODIFIER||||234|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.2|1|1),INTRON(MODIFIER||||185|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.3|1|1),INTRON(MODIFIER||||185|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.4|1|1) FN2792-S.SNP.7:27638279 chr07:027638279 0 W/27638279-27638279 FN2792-S SNP A -> G AC=1;AN=198;BQB=0.409909;DP=4564;DP4=2097,2286,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47157e-08;MQSB=0.981314;RPB=0.275367;SGB=50.9344;VDB=0.788005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T307A|309|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.1|8|1),UTR_3_PRIME(MODIFIER||632||234|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.2|7|1),UTR_3_PRIME(MODIFIER||1063||185|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.3|4|1),UTR_3_PRIME(MODIFIER||1063||185|LOC_Os07g46340|protein_coding|CODING|LOC_Os07g46340.4|5|1) FN876-S.SNP.7:27639509 chr07:027639509 0 W/27639509-27639509 FN876-S Single Base Substitution T-G INTRON HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3444-S.SNP.7:27652007 chr07:027652007 0 W/27652007-27652007 FN3444-S SNP A -> T AC=1;AN=184;BQB=0.838023;DP=3208;DP4=986,1564,4,15;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=4.03379e-09;MQSB=0.919753;RPB=0.605257;SGB=-131.252;VDB=0.296653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.7:27652007 chr07:027652007 0 W/27652007-27652007 FN3879-S SNP A -> T AC=1;AN=158;BQB=0.402126;DP=2652;DP4=857,1196,15,17;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0;MQB=1.29481e-12;MQSB=0.749309;RPB=0.987846;SGB=-10.9963;VDB=0.0789195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.7:27672987 chr07:027672987 0 W/27672987-27672987 FN2177-S SNP C -> G AC=1;AN=168;BQB=0.00928764;DP=4127;DP4=1962,2121,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=5.2108e-05;MQSB=0.371649;RPB=0.231769;SGB=-98.0622;VDB=0.637103;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.7:27673686 chr07:027673686 0 W/27673686-27673686 FN1679-S SNP G -> A AC=1;AN=188;BQB=0.0212397;DP=4125;DP4=2054,2006,12,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38163e-09;MQSB=0.990041;RPB=0.402734;SGB=-225.535;VDB=0.885489;EFF=INTERGENIC(MODIFIER||||||||||1) FN-75.SNP.7:27680609 chr07:027680609 0 W/27680609-27680609 FN-75 Single Base Substitution A-G INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN868-S.SNP.7:27681649 chr07:027681649 0 W/27681649-27681649 FN868-S Single Base Substitution A-T INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1320-S.SNP.7:27683597 chr07:027683597 0 W/27683597-27683597 FN1320-S Single Base Substitution A-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1053-S.SNP.7:27692345 chr07:027692345 0 W/27692345-27692345 FN1053-S Single Base Substitution G-T INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN414-S.SNP.7:27695418 chr07:027695418 0 W/27695418-27695418 FN414-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g46410 bifunctional thioredoxin reductase/thioredoxin, putative, expressed SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1485-S.SNP.7:27698678 chr07:027698678 0 W/27698678-27698678 FN1485-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g46410 bifunctional thioredoxin reductase/thioredoxin, putative, expressed SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN-233.SNP.7:27704388 chr07:027704388 0 W/27704388-27704388 FN-233 Single Base Substitution G-A INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2533-S.SNP.7:27704451 chr07:027704451 0 W/27704451-27704451 FN2533-S SNP A -> G AC=2;AN=198;BQB=0.514275;DP=4292;DP4=1993,2139,16,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.14805e-19;MQSB=0.945458;RPB=0.720495;SGB=73.4614;VDB=0.423673;EFF=INTRON(MODIFIER||||428|LOC_Os07g46430|protein_coding|CODING|LOC_Os07g46430.1|1|1),INTRON(MODIFIER||||393|LOC_Os07g46430|protein_coding|CODING|LOC_Os07g46430.2|1|1) FN3789-S.SNP.7:27709575 chr07:027709575 0 W/27709575-27709575 FN3789-S SNP A -> C AC=2;AN=190;BQB=0.998536;DP=3257;DP4=1700,1293,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.05452e-16;MQSB=0.957872;RPB=0.888864;SGB=67.0756;VDB=0.460549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D110E|415|LOC_Os07g46440|protein_coding|CODING|LOC_Os07g46440.1|1|1) FN4088-S.SNP.7:27711979 chr07:027711979 0 W/27711979-27711979 FN4088-S SNP C -> T AC=2;AN=182;BQB=0.808078;DP=2840;DP4=1492,1276,16,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.34266e-18;MQSB=0.981933;RPB=0.340299;SGB=105.845;VDB=0.841932;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.7:27721336 chr07:027721336 0 W/27721336-27721336 FN-397 Single Base Substitution A-C INTRON HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1213-S.SNP.7:27722309 chr07:027722309 0 W/27722309-27722309 FN1213-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g46450 pleckstrin homology domain-containing protein, putative, expressed SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1000-S.SNP.7:27722924 chr07:027722924 0 W/27722924-27722924 FN1000-S Single Base Substitution T-A INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN4154-S.SNP.7:27735523 chr07:027735523 0 W/27735523-27735523 FN4154-S SNP G -> T AC=1;AN=170;BQB=0.514337;DP=2702;DP4=1275,1326,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.86601e-09;MQSB=0.942439;RPB=0.753526;SGB=11.5457;VDB=0.97658;EFF=INTRON(MODIFIER||||1615|LOC_Os07g46460|protein_coding|CODING|LOC_Os07g46460.1|4|1) FN587-S.SNP.7:27736488 chr07:027736488 0 W/27736488-27736488 FN587-S Single Base Substitution T-C INTRON HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3808-S.SNP.7:27736627 chr07:027736627 0 W/27736627-27736627 FN3808-S SNP G -> T AC=1;AN=190;BQB=0.967278;DP=2967;DP4=1528,1343,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22609e-08;MQSB=0.998092;RPB=0.740508;SGB=58.2031;VDB=0.488253;EFF=INTRON(MODIFIER||||1615|LOC_Os07g46460|protein_coding|CODING|LOC_Os07g46460.1|2|1) FN-382.SNP.7:27738878 chr07:027738878 0 W/27738878-27738878 FN-382 Single Base Substitution A-T INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN1651-S.SNP.7:27740125 chr07:027740125 0 W/27740125-27740125 FN1651-S Single Base Substitution C-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN1236-S.SNP.7:27740435 chr07:027740435 0 W/27740435-27740435 FN1236-S Single Base Substitution T-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1266-S.SNP.7:27750671 chr07:027750671 0 W/27750671-27750671 FN1266-S Single Base Substitution G-C INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3598-S.SNP.7:27753570 chr07:027753570 0 W/27753570-27753570 FN3598-S SNP C -> T AC=1;AN=188;BQB=0.170299;DP=2870;DP4=1402,1407,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18777e-11;MQSB=0.982324;RPB=0.324988;SGB=16.3413;VDB=0.942633;EFF=INTRON(MODIFIER||||791|LOC_Os07g46490|protein_coding|CODING|LOC_Os07g46490.1|7|1) FN868-S.SNP.7:27758147 chr07:027758147 0 W/27758147-27758147 FN868-S Single Base Substitution G-A INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3488-S.SNP.7:27768414 chr07:027768414 0 W/27768414-27768414 FN3488-S SNP A -> G AC=1;AN=184;BQB=0.87056;DP=3565;DP4=1580,1817,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.00223432;MQSB=0.00154115;RPB=0.961409;SGB=53.2642;VDB=0.547437;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.7:27771779 chr07:027771779 0 W/27771779-27771779 FN4155-S SNP G -> A AC=2;AN=170;BQB=0.746129;DP=2437;DP4=1240,1098,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.97697e-16;MQSB=0.999974;RPB=0.958909;SGB=114.512;VDB=0.842744;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.7:27800586 chr07:027800586 0 W/27800586-27800586 FN1565-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g46550 annexin, putative, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN625-S.SNP.7:27805351 chr07:027805351 0 W/27805351-27805351 FN625-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os07g46555 F-box domain containing protein, expressed SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2249-S.SNP.7:27807155 chr07:027807155 0 W/27807155-27807155 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.905254;DP=4754;DP4=2161,2173,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=1.61067e-07;MQSB=0.000441614;RPB=0.725127;SGB=49.1985;VDB=0.576543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.7:27808674 chr07:027808674 0 W/27808674-27808674 FN1703-S SNP G -> T AC=1;AN=188;BQB=0.0421939;DP=2799;DP4=2105,665,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.0263239;MQSB=0.117698;RPB=0.663279;SGB=-16.0863;VDB=0.840168;EFF=INTRON(MODIFIER||||302|LOC_Os07g46560|protein_coding|CODING|LOC_Os07g46560.1|1|1) FN1297-S.SNP.7:27809377 chr07:027809377 0 W/27809377-27809377 FN1297-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g46560 seven in absentia protein family domain containing protein, expressed SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1635-S.SNP.7:27817958 chr07:027817958 0 W/27817958-27817958 FN1635-S SNP C -> A AC=1;AN=188;BQB=0.474037;DP=3818;DP4=1646,2134,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.7669e-10;MQSB=0.999795;RPB=0.993657;SGB=-13.3699;VDB=0.720337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.7:27828973 chr07:027828973 0 W/27828973-27828973 FN2116-S SNP G -> T AC=1;AN=168;BQB=0.00122857;DP=3780;DP4=2034,1698,7,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.33907e-08;MQSB=0.689637;RPB=0.989657;SGB=-270.884;VDB=0.634;EFF=INTRON(MODIFIER||||1002|LOC_Os07g46590|protein_coding|CODING|LOC_Os07g46590.1|14|1) FN2084-S.SNP.7:27830801 chr07:027830801 0 W/27830801-27830801 FN2084-S SNP T -> A AC=1;AN=168;BQB=0.214066;DP=4091;DP4=1808,2229,21,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.34199e-11;MQSB=0.955395;RPB=0.703253;SGB=-196.035;VDB=0.566782;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I332F|1002|LOC_Os07g46590|protein_coding|CODING|LOC_Os07g46590.1|10|1) FN1102-S.SNP.7:27831223 chr07:027831223 0 W/27831223-27831223 FN1102-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3599-S.SNP.7:27832954 chr07:027832954 0 W/27832954-27832954 FN3599-S SNP A -> C AC=1;AN=188;BQB=0.831716;DP=2749;DP4=1253,1352,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53401e-10;MQSB=0.999895;RPB=0.834884;SGB=67.1521;VDB=0.873176;EFF=SPLICE_SITE_REGION(LOW||||1002|LOC_Os07g46590|protein_coding|CODING|LOC_Os07g46590.1|4|1),INTRON(MODIFIER||||1002|LOC_Os07g46590|protein_coding|CODING|LOC_Os07g46590.1|4|1) FN3310-S.SNP.7:27845483 chr07:027845483 0 W/27845483-27845483 FN3310-S SNP T -> A AC=1;AN=184;BQB=0.95388;DP=3200;DP4=1227,1436,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=2.81314e-06;MQSB=0.996185;RPB=0.757334;SGB=18.2315;VDB=0.160695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.7:27848647 chr07:027848647 0 W/27848647-27848647 FN3990-S SNP G -> A AC=2;AN=168;BQB=0.884341;DP=2427;DP4=1119,1164,14,14;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.06631e-08;MQSB=0.00437835;RPB=0.471813;SGB=118.635;VDB=0.48805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3496-S.SNP.7:27853630 chr07:027853630 0 W/27853630-27853630 FN3496-S SNP T -> A AC=2;AN=188;BQB=0.999505;DP=2715;DP4=1213,1420,8,5;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=1.7394e-06;MQSB=0.0172042;RPB=0.985844;SGB=53.5223;VDB=0.326671;EFF=INTRON(MODIFIER||||353|LOC_Os07g46620|protein_coding|CODING|LOC_Os07g46620.1|9|1) FN3938-S.SNP.7:27859668 chr07:027859668 0 W/27859668-27859668 FN3938-S SNP G -> A AC=2;AN=158;BQB=0.829444;DP=2512;DP4=1214,1219,7,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.06399e-06;MQSB=0.65303;RPB=0.879173;SGB=60.1755;VDB=0.420495;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.7:27860444 chr07:027860444 0 W/27860444-27860444 FN754-S Single Base Substitution G-T INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN661-S.SNP.7:27881074 chr07:027881074 0 W/27881074-27881074 FN661-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN661-S.SNP.7:27881075 chr07:027881075 0 W/27881075-27881075 FN661-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os07g46650 transposon protein, putative, unclassified, expressed SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2226-S.SNP.7:27902658 chr07:027902658 0 W/27902658-27902658 FN2226-S SNP G -> T AC=2;AN=190;BQB=0.293986;DP=5043;DP4=2496,2131,23,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.64746e-24;MQSB=0.995506;RPB=0.321816;SGB=0.624943;VDB=0.139293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.7:27902659 chr07:027902659 0 W/27902659-27902659 FN2226-S SNP C -> T AC=2;AN=190;BQB=0.86955;DP=5044;DP4=2497,2104,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.91313e-25;MQSB=0.927727;RPB=0.698221;SGB=47.6197;VDB=0.195811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.7:27911963 chr07:027911963 0 W/27911963-27911963 FN1026-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g46690 PHD-finger family protein, expressed SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2436.SNP.7:27914617 chr07:027914617 0 W/27914617-27914617 FN2436 SNP C -> A AC=1;AN=200;BQB=0.891759;DP=4651;DP4=2115,2340,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95547e-08;MQSB=0.962127;RPB=0.348746;SGB=1.46408;VDB=0.835814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.7:27925150 chr07:027925150 0 W/27925150-27925150 FN2687-S SNP C -> A AC=1;AN=200;BQB=0.805443;DP=5200;DP4=2815,2129,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.35657e-10;MQSB=0.987015;RPB=0.725084;SGB=72.6852;VDB=0.441382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.7:27931129 chr07:027931129 0 W/27931129-27931129 FN1410-S Single Base Substitution C-T INTRON HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2771-S.SNP.7:27935463 chr07:027935463 0 W/27935463-27935463 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.67749;DP=4141;DP4=2211,1683,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000168152;MQSB=0.994459;RPB=0.939288;SGB=49.5489;VDB=0.654994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.7:27937684 chr07:027937684 0 W/27937684-27937684 FN2320 SNP G -> T AC=2;AN=192;BQB=0.987402;DP=4990;DP4=2411,2288,16,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.67989e-13;MQSB=0.872678;RPB=0.851199;SGB=24.5626;VDB=0.863949;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.7:27940196 chr07:027940196 0 W/27940196-27940196 FN_815-4-1 Single Base Substitution A-G Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3487-S.SNP.7:27946528 chr07:027946528 0 W/27946528-27946528 FN3487-S SNP C -> T AC=2;AN=184;BQB=0.1533;DP=2663;DP4=1265,1290,13,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18034e-17;MQSB=0.830528;RPB=0.351289;SGB=34.1945;VDB=0.520225;EFF=INTRON(MODIFIER||||249|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.1|2|1),INTRON(MODIFIER||||214|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.2|2|1) FN3487-S.SNP.7:27946529 chr07:027946529 0 W/27946529-27946529 FN3487-S SNP A -> T AC=2;AN=184;BQB=0.159972;DP=2680;DP4=1285,1293,12,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.46268e-19;MQSB=0.82303;RPB=0.0878456;SGB=34.1945;VDB=0.284679;EFF=INTRON(MODIFIER||||249|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.1|2|1),INTRON(MODIFIER||||214|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.2|2|1) FN3828-S.SNP.7:27947168 chr07:027947168 0 W/27947168-27947168 FN3828-S SNP G -> T AC=2;AN=190;BQB=0.999213;DP=2374;DP4=1135,1156,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47836e-13;MQSB=0.980726;RPB=0.408558;SGB=49.1985;VDB=0.345393;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E185*|249|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.1|5|1),STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E185*|214|LOC_Os07g46760|protein_coding|CODING|LOC_Os07g46760.2|5|1);LOF=(LOC_Os07g46760|LOC_Os07g46760|2|0.50);NMD=(LOC_Os07g46760|LOC_Os07g46760|2|0.50) FN2725-S.SNP.7:27956711 chr07:027956711 0 W/27956711-27956711 FN2725-S SNP T -> A AC=1;AN=200;BQB=0.999885;DP=5103;DP4=2434,2419,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46098e-10;MQSB=0.990636;RPB=0.997621;SGB=54.6902;VDB=0.3436;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q114L|481|LOC_Os07g46780|protein_coding|CODING|LOC_Os07g46780.1|3|1),UTR_5_PRIME(MODIFIER||358||335|LOC_Os07g46780|protein_coding|CODING|LOC_Os07g46780.2|3|1),UTR_5_PRIME(MODIFIER||358||316|LOC_Os07g46780|protein_coding|CODING|LOC_Os07g46780.3|3|1) FN3561-S.SNP.7:27969520 chr07:027969520 0 W/27969520-27969520 FN3561-S SNP T -> C AC=1;AN=188;BQB=0.965418;DP=2809;DP4=1121,1558,6,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.95284e-12;MQSB=0.894402;RPB=0.761065;SGB=41.3359;VDB=0.472828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.7:27983089 chr07:027983089 0 W/27983089-27983089 FN2489 SNP C -> T AC=2;AN=200;BQB=0.847913;DP=4718;DP4=2104,2329,24,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.45501e-26;MQSB=0.952802;RPB=0.382463;SGB=5.65004;VDB=0.0171796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.7:27988433 chr07:027988433 0 W/27988433-27988433 FN3629-S SNP T -> C AC=1;AN=190;BQB=0.993268;DP=2075;DP4=970,858,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00169681;MQSB=0.259331;RPB=0.454691;SGB=21.8853;VDB=0.139876;EFF=INTERGENIC(MODIFIER||||||||||1) FN-75.SNP.7:27989899 chr07:027989899 0 W/27989899-27989899 FN-75 Single Base Substitution A-C INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3373-S.SNP.7:27991206 chr07:027991206 0 W/27991206-27991206 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.886316;DP=2745;DP4=1205,1405,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42034e-07;MQSB=0.999157;RPB=0.912178;SGB=62.3078;VDB=0.346756;EFF=UTR_5_PRIME(MODIFIER||217||296|LOC_Os07g46830|protein_coding|CODING|LOC_Os07g46830.1|1|1) FN-160.SNP.7:27995645 chr07:027995645 0 W/27995645-27995645 FN-160 Single Base Substitution T-A INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN3489-S.SNP.7:27995645 chr07:027995645 0 W/27995645-27995645 FN3489-S SNP T -> A AC=2;AN=184;BQB=0.687096;DP=3370;DP4=1826,1401,21,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.03823e-20;MQSB=0.715188;RPB=0.989327;SGB=157.265;VDB=0.34743;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.7:27995645 chr07:027995645 0 W/27995645-27995645 FN4075-S SNP T -> A AC=1;AN=182;BQB=0.957588;DP=3295;DP4=1771,1412,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.23323e-07;MQSB=0.851844;RPB=0.749657;SGB=53.1331;VDB=0.081743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.7:27999675 chr07:027999675 0 W/27999675-27999675 FN2142-S SNP T -> C AC=2;AN=168;BQB=0.0131459;DP=3940;DP4=1980,1891,22,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.81658e-18;MQSB=0.997494;RPB=0.888564;SGB=-250.865;VDB=0.650037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.7:28001191 chr07:028001191 0 W/28001191-28001191 FN2489 SNP G -> T AC=2;AN=200;BQB=0.928247;DP=4607;DP4=2136,2176,26,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34649e-28;MQSB=0.998519;RPB=0.197486;SGB=62.4605;VDB=0.193177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN-379 Single Base Substitution T-C INTRON HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN3420-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN3420-S SNP T -> C AC=1;AN=184;BQB=0.978395;DP=3530;DP4=1786,1455,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.02009e-09;MQSB=0.99729;RPB=0.385161;SGB=-57.7467;VDB=0.597072;EFF=INTRON(MODIFIER||||300|LOC_Os07g46846|protein_coding|CODING|LOC_Os07g46846.1|2|1) FN3771-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN3771-S SNP T -> C AC=2;AN=190;BQB=0.727447;DP=2959;DP4=1416,1306,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.94279e-14;MQSB=0.950478;RPB=0.765214;SGB=67.0756;VDB=0.105821;EFF=INTRON(MODIFIER||||300|LOC_Os07g46846|protein_coding|CODING|LOC_Os07g46846.1|2|1) FN3886-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN3886-S SNP T -> C AC=2;AN=158;BQB=0.966517;DP=2740;DP4=1278,1241,25,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.10083e-21;MQSB=0.968073;RPB=0.329714;SGB=-52.4039;VDB=0.367742;EFF=INTRON(MODIFIER||||300|LOC_Os07g46846|protein_coding|CODING|LOC_Os07g46846.1|2|1) FN412-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN412-S Single Base Substitution T-C INTRON HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN501-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN501-S Single Base Substitution T-C INTRON HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN661-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN661-S Single Base Substitution T-C INTRON HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN797-S.SNP.7:28002985 chr07:028002985 0 W/28002985-28002985 FN797-S Single Base Substitution T-C INTRON HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN777-S.SNP.7:28003071 chr07:028003071 0 W/28003071-28003071 FN777-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g46846 sex determination protein tasselseed-2, putative, expressed SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN-9.SNP.7:28005621 chr07:028005621 0 W/28005621-28005621 FN-9 Single Base Substitution G-T INTRON Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN3494-S.SNP.7:28006592 chr07:028006592 0 W/28006592-28006592 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.81142;DP=2309;DP4=1012,1182,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35018e-06;MQSB=0.99932;RPB=0.0299559;SGB=53.2642;VDB=0.362593;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.7:28020146 chr07:028020146 0 W/28020146-28020146 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.998805;DP=3193;DP4=1702,1463,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24557e-07;MQSB=0.898184;RPB=0.353712;SGB=-16.665;VDB=0.0496732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.7:28025520 chr07:028025520 0 W/28025520-28025520 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.624387;DP=1617;DP4=724,842,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.0293376;MQSB=5.15549e-07;RPB=0.9695;SGB=17.3231;VDB=0.994063;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R35C|2027|LOC_Os07g46880|protein_coding|CODING|LOC_Os07g46880.1|1|1) FN-129.SNP.7:28049587 chr07:028049587 0 W/28049587-28049587 FN-129 Single Base Substitution T-C INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2638-S.SNP.7:28051969 chr07:028051969 0 W/28051969-28051969 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.825642;DP=4851;DP4=2147,2455,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.24434e-08;MQSB=0.991002;RPB=0.916741;SGB=40.2696;VDB=0.454779;EFF=INTRON(MODIFIER||||298|LOC_Os07g46920|protein_coding|CODING|LOC_Os07g46920.1|2|1) FN1483-S.SNP.7:28061658 chr07:028061658 0 W/28061658-28061658 FN1483-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g46950 ligA, putative, expressed SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN3780-S.SNP.7:28074986 chr07:028074986 0 W/28074986-28074986 FN3780-S SNP T -> C AC=1;AN=190;BQB=0.87024;DP=2809;DP4=1442,1260,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.77222e-06;MQSB=0.912553;RPB=0.848955;SGB=32.5467;VDB=0.376268;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.7:28078163 chr07:028078163 0 W/28078163-28078163 FN4105-S SNP G -> T AC=1;AN=182;BQB=0.919538;DP=2822;DP4=1412,1336,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.80082e-06;MQSB=0.91143;RPB=0.795826;SGB=28.6061;VDB=0.73378;EFF=INTRON(MODIFIER||||254|LOC_Os07g47000|protein_coding|CODING|LOC_Os07g47000.1|7|1) FN-228.SNP.7:28083487 chr07:028083487 0 W/28083487-28083487 FN-228 Single Base Substitution T-A INTERGENIC HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2629-S.SNP.7:28085146 chr07:028085146 0 W/28085146-28085146 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.861587;DP=4655;DP4=2144,2256,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.65241e-13;MQSB=0.879489;RPB=0.197882;SGB=95.7111;VDB=0.403275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.7:28088758 chr07:028088758 0 W/28088758-28088758 FN1409-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g47010 transposon protein, putative, unclassified, expressed SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN894-S.SNP.7:28093270 chr07:028093270 0 W/28093270-28093270 FN894-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2455.SNP.7:28097490 chr07:028097490 0 W/28097490-28097490 FN2455 SNP C -> A AC=1;AN=200;BQB=0.999899;DP=5035;DP4=2302,2417,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16787e-15;MQSB=0.806861;RPB=0.87078;SGB=104.921;VDB=0.88751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.7:28097491 chr07:028097491 0 W/28097491-28097491 FN2455 SNP G -> A AC=1;AN=200;BQB=0.960016;DP=4992;DP4=2314,2350,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.08986e-16;MQSB=0.702154;RPB=0.901971;SGB=79.9264;VDB=0.911803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.7:28106632 chr07:028106632 0 W/28106632-28106632 FN3064-S SNP A -> G AC=1;AN=184;BQB=0.802685;DP=3124;DP4=1382,1663,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.82008e-08;MQSB=0.99157;RPB=0.171785;SGB=57.786;VDB=0.107093;EFF=SPLICE_SITE_REGION(LOW||||637|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.1|5|1),SPLICE_SITE_REGION(LOW||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.2|5|1),SPLICE_SITE_REGION(LOW||||539|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.3|4|1),SPLICE_SITE_REGION(LOW||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.4|6|1),INTRON(MODIFIER||||637|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.1|5|1),INTRON(MODIFIER||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.2|5|1),INTRON(MODIFIER||||539|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.3|4|1),INTRON(MODIFIER||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.4|6|1) FN2468.SNP.7:28106766 chr07:028106766 0 W/28106766-28106766 FN2468 SNP T -> A AC=1;AN=200;BQB=0.0205184;DP=5357;DP4=2803,2254,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52919e-09;MQSB=0.732647;RPB=0.604148;SGB=47.7211;VDB=0.738738;EFF=INTRON(MODIFIER||||637|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.1|5|1),INTRON(MODIFIER||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.2|5|1),INTRON(MODIFIER||||539|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.3|4|1),INTRON(MODIFIER||||614|LOC_Os07g47030|protein_coding|CODING|LOC_Os07g47030.4|6|1) FN998-S.SNP.7:28110265 chr07:028110265 0 W/28110265-28110265 FN998-S Single Base Substitution A-G INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1061-S.SNP.7:28110776 chr07:028110776 0 W/28110776-28110776 FN1061-S Single Base Substitution T-C INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3846-S.SNP.7:28111658 chr07:028111658 0 W/28111658-28111658 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.882256;DP=3035;DP4=1557,1343,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1011e-08;MQSB=0.989139;RPB=0.362906;SGB=53.6492;VDB=0.60582;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.7:28112975 chr07:028112975 0 W/28112975-28112975 FN1466-S Single Base Substitution G-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1050-S.SNP.7:28113117 chr07:028113117 0 W/28113117-28113117 FN1050-S Single Base Substitution G-A INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN3965-S.SNP.7:28114110 chr07:028114110 0 W/28114110-28114110 FN3965-S SNP A -> G AC=2;AN=168;BQB=0.900531;DP=1975;DP4=1160,617,21,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.19942e-21;MQSB=0.923302;RPB=0.808272;SGB=126.516;VDB=0.825801;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.7:28114885 chr07:028114885 0 W/28114885-28114885 FN2085-S SNP C -> A AC=2;AN=168;BQB=0.907024;DP=2808;DP4=795,1968,7,19;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=0.000146127;MQSB=0.47494;RPB=0.8922;SGB=-11.926;VDB=0.320127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.7:28114885 chr07:028114885 0 W/28114885-28114885 FN3398-S SNP C -> A AC=2;AN=184;BQB=0.829019;DP=2841;DP4=1174,1554,11,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=5.64181e-11;MQSB=0.765838;RPB=0.736923;SGB=70.9657;VDB=0.979793;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.7:28114885 chr07:028114885 0 W/28114885-28114885 FN4260-S SNP C -> A AC=2;AN=170;BQB=0.978983;DP=2163;DP4=849,1223,12,21;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=5.36085e-11;MQSB=0.499389;RPB=0.352498;SGB=103.731;VDB=0.601868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.7:28121878 chr07:028121878 0 W/28121878-28121878 FN3594-S SNP G -> T AC=1;AN=188;BQB=0.978963;DP=2594;DP4=1430,1110,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.45866e-06;MQSB=0.979891;RPB=0.311557;SGB=35.3493;VDB=0.33691;EFF=INTRON(MODIFIER||||281|LOC_Os07g47040|protein_coding|CODING|LOC_Os07g47040.1|2|1),INTRON(MODIFIER||||259|LOC_Os07g47040|protein_coding|CODING|LOC_Os07g47040.2|1|1),INTRON(MODIFIER||||259|LOC_Os07g47040|protein_coding|CODING|LOC_Os07g47040.3|2|1) FN1549-S.SNP.7:28122215 chr07:028122215 0 W/28122215-28122215 FN1549-S Single Base Substitution C-A INTRON HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1549-S.SNP.7:28122220 chr07:028122220 0 W/28122220-28122220 FN1549-S Single Base Substitution C-A INTRON HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1045-S.SNP.7:28130696 chr07:028130696 0 W/28130696-28130696 FN1045-S Single Base Substitution C-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2195-S.SNP.7:28138605 chr07:028138605 0 W/28138605-28138605 FN2195-S SNP C -> G AC=1;AN=190;BQB=0.949411;DP=5011;DP4=2357,2391,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.31816e-10;MQSB=0.725376;RPB=0.853431;SGB=31.3213;VDB=0.785527;EFF=INTRON(MODIFIER||||349|LOC_Os07g47070|protein_coding|CODING|LOC_Os07g47070.1|6|1) FN1002-S.SNP.7:28157500 chr07:028157500 0 W/28157500-28157500 FN1002-S Single Base Substitution G-T INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2656-S.SNP.7:28158777 chr07:028158777 0 W/28158777-28158777 FN2656-S SNP A -> G AC=1;AN=200;BQB=0.593778;DP=5710;DP4=2914,2574,18,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32395e-25;MQSB=0.99449;RPB=0.9003;SGB=94.6142;VDB=0.0108038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.7:28159964 chr07:028159964 0 W/28159964-28159964 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.87257;DP=2580;DP4=1669,780,18,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000775194;MQB=1.05666e-13;MQSB=0.309029;RPB=0.990992;SGB=85.0529;VDB=0.541217;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.7:28160822 chr07:028160822 0 W/28160822-28160822 FN4240-S SNP G -> T AC=1;AN=170;BQB=0.975163;DP=2500;DP4=1159,1272,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.40417e-05;MQSB=0.970899;RPB=0.993648;SGB=17.6652;VDB=0.868994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2352.SNP.7:28162763 chr07:028162763 0 W/28162763-28162763 FN2352 SNP G -> A AC=1;AN=192;BQB=0.25112;DP=3700;DP4=1244,2222,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.98662e-12;MQSB=0.359993;RPB=0.683259;SGB=13.6122;VDB=0.323969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2352.SNP.7:28162764 chr07:028162764 0 W/28162764-28162764 FN2352 SNP G -> A AC=1;AN=192;BQB=0.658866;DP=3709;DP4=1225,2200,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.64686e-14;MQSB=0.285215;RPB=0.525599;SGB=-11.3826;VDB=0.441129;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.7:28167603 chr07:028167603 0 W/28167603-28167603 FN920-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN-189.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN-189 Single Base Substitution G-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-34.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN-34 Single Base Substitution G-A INTERGENIC Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN1403-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN1403-S Single Base Substitution G-A INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1673-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN1673-S SNP G -> A AC=2;AN=188;BQB=0.0242064;DP=4414;DP4=2117,2198,31,18;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000226552;MQB=7.76988e-09;MQSB=0.688187;RPB=0.722856;SGB=-478.913;VDB=0.412908;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN2124-S SNP G -> A AC=2;AN=168;BQB=0.093917;DP=4496;DP4=2157,2193,53,41;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00022242;MQB=4.98654e-17;MQSB=0.25997;RPB=0.987634;SGB=-571.08;VDB=0.584454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN2187-S SNP G -> A AC=2;AN=190;BQB=0.890245;DP=3566;DP4=1139,1975,7,22;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.29051e-12;MQSB=0.0283689;RPB=0.481059;SGB=-141.878;VDB=0.658622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN3517-S SNP G -> A AC=2;AN=188;BQB=0.535894;DP=2422;DP4=1016,1150,8,12;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=3.53247e-07;MQSB=0.363048;RPB=0.921058;SGB=60.7873;VDB=0.11549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN3717-S SNP G -> A AC=2;AN=190;BQB=0.999067;DP=2399;DP4=858,1253,6,4;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.13278e-05;MQSB=0.325454;RPB=0.852381;SGB=10.8904;VDB=0.89913;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.7:28169912 chr07:028169912 0 W/28169912-28169912 FN994-S Single Base Substitution G-A INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN770-S.SNP.7:28171067 chr07:028171067 0 W/28171067-28171067 FN770-S Single Base Substitution C-T INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN-164.SNP.7:28181429 chr07:028181429 0 W/28181429-28181429 FN-164 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os07g47120 beta-amylase, putative, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN940-S.SNP.7:28184119 chr07:028184119 0 W/28184119-28184119 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN940-S.SNP.7:28184120 chr07:028184120 0 W/28184120-28184120 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-294.SNP.7:28188200 chr07:028188200 0 W/28188200-28188200 FN-294 Single Base Substitution C-T INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN2203-S.SNP.7:28193181 chr07:028193181 0 W/28193181-28193181 FN2203-S SNP A -> G AC=2;AN=190;BQB=0.986669;DP=4882;DP4=2432,2094,38,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.04579e-28;MQSB=0.908243;RPB=0.998596;SGB=181.81;VDB=0.193991;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.7:28201663 chr07:028201663 0 W/28201663-28201663 FN852-S Single Base Substitution G-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3493-S.SNP.7:28206307 chr07:028206307 0 W/28206307-28206307 FN3493-S SNP C -> G AC=1;AN=184;BQB=0.769419;DP=1060;DP4=347,668,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.0021286;MQSB=0.000317998;RPB=0.999997;SGB=26.1347;VDB=0.0722896;EFF=UTR_5_PRIME(MODIFIER||84||482|LOC_Os07g47180|protein_coding|CODING|LOC_Os07g47180.2|1|1) FN416-S.SNP.7:28213714 chr07:028213714 0 W/28213714-28213714 FN416-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os07g47194 GEX1, putative, expressed SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN872-S.SNP.7:28218292 chr07:028218292 0 W/28218292-28218292 FN872-S Single Base Substitution A-G INTRON HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN4037-S.SNP.7:28226872 chr07:028226872 0 W/28226872-28226872 FN4037-S SNP T -> C AC=1;AN=168;BQB=0.514366;DP=2863;DP4=1268,1490,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.66024e-05;MQSB=0.938091;RPB=0.398287;SGB=52.1728;VDB=0.339187;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.7:28229380 chr07:028229380 0 W/28229380-28229380 FN3791-S SNP A -> G AC=1;AN=190;BQB=0.954588;DP=3242;DP4=1136,1902,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.68841e-09;MQSB=0.967491;RPB=0.999639;SGB=46.7622;VDB=0.466606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T271A|673|LOC_Os07g47230|protein_coding|CODING|LOC_Os07g47230.1|1|1) FN3836-S.SNP.7:28238127 chr07:028238127 0 W/28238127-28238127 FN3836-S SNP A -> G AC=1;AN=190;BQB=0.308766;DP=2905;DP4=1434,1380,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.49755e-07;MQSB=0.973155;RPB=0.997206;SGB=23.6597;VDB=0.747415;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.7:28247783 chr07:028247783 0 W/28247783-28247783 FN429-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g47260 H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3511-S.SNP.7:28254164 chr07:028254164 0 W/28254164-28254164 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.957334;DP=2697;DP4=1313,1251,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.9614e-06;MQSB=0.982407;RPB=0.994831;SGB=35.3493;VDB=0.373295;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.7:28257549 chr07:028257549 0 W/28257549-28257549 FN804-S Single Base Substitution A-G INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3505-S.SNP.7:28263093 chr07:028263093 0 W/28263093-28263093 FN3505-S SNP C -> T AC=2;AN=188;BQB=0.999027;DP=2353;DP4=1254,1013,13,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.81008e-13;MQSB=0.984853;RPB=0.407929;SGB=89.8686;VDB=0.238187;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.7:28267326 chr07:028267326 0 W/28267326-28267326 FN-283 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os07g47284 DNA polymerase zeta catalytic subunit, putative, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN-283.SNP.7:28267328 chr07:028267328 0 W/28267328-28267328 FN-283 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os07g47284 DNA polymerase zeta catalytic subunit, putative, expressed SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3419-S.SNP.7:28272698 chr07:028272698 0 W/28272698-28272698 FN3419-S SNP G -> C AC=2;AN=184;BQB=0.800527;DP=2439;DP4=1197,1162,12,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.70541e-09;MQSB=0.979246;RPB=0.664742;SGB=75.8731;VDB=0.5892;EFF=INTRON(MODIFIER||||479|LOC_Os07g47290|protein_coding|CODING|LOC_Os07g47290.1|20|1),INTRON(MODIFIER||||373|LOC_Os07g47290|protein_coding|CODING|LOC_Os07g47290.3|18|1) FN1723-S.SNP.7:28273264 chr07:028273264 0 W/28273264-28273264 FN1723-S SNP A -> G AC=1;AN=188;BQB=0.88073;DP=3380;DP4=1466,1781,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000295858;MQB=8.91935e-11;MQSB=0.573822;RPB=0.690296;SGB=33.7061;VDB=0.117147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F379S|479|LOC_Os07g47290|protein_coding|CODING|LOC_Os07g47290.1|17|1),UTR_3_PRIME(MODIFIER||107||373|LOC_Os07g47290|protein_coding|CODING|LOC_Os07g47290.3|16|1) FN791-S.SNP.7:28278051 chr07:028278051 0 W/28278051-28278051 FN791-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os07g47300 spo0B-associated GTP-binding protein, putative, expressed SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN791-S.SNP.7:28278052 chr07:028278052 0 W/28278052-28278052 FN791-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g47300 spo0B-associated GTP-binding protein, putative, expressed SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2370.SNP.7:28281095 chr07:028281095 0 W/28281095-28281095 FN2370 SNP A -> C AC=1;AN=192;BQB=0.884015;DP=5241;DP4=2469,2367,6,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.3572e-15;MQSB=0.890793;RPB=0.90272;SGB=113.111;VDB=0.433647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.7:28283428 chr07:028283428 0 W/28283428-28283428 FN3459-S SNP G -> A AC=1;AN=184;BQB=0.984081;DP=2684;DP4=1002,1584,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.32693e-07;MQSB=0.936805;RPB=0.457428;SGB=53.2642;VDB=0.429971;EFF=INTRON(MODIFIER||||293|LOC_Os07g47310|protein_coding|CODING|LOC_Os07g47310.1|2|1) FN3332-S.SNP.7:28283974 chr07:028283974 0 W/28283974-28283974 FN3332-S SNP T -> A AC=1;AN=184;BQB=0.475909;DP=2685;DP4=1301,1318,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.91663e-08;MQSB=0.98434;RPB=0.958333;SGB=48.7425;VDB=0.0523688;EFF=INTRON(MODIFIER||||293|LOC_Os07g47310|protein_coding|CODING|LOC_Os07g47310.1|2|1) FN3332-S.SNP.7:28283975 chr07:028283975 0 W/28283975-28283975 FN3332-S SNP A -> T AC=1;AN=184;BQB=0.992591;DP=2677;DP4=1285,1288,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09383e-08;MQSB=0.981758;RPB=0.709668;SGB=35.7479;VDB=0.161396;EFF=INTRON(MODIFIER||||293|LOC_Os07g47310|protein_coding|CODING|LOC_Os07g47310.1|2|1) FN3445-S.SNP.7:28288352 chr07:028288352 0 W/28288352-28288352 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.945822;DP=2734;DP4=1322,1350,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75482e-07;MQSB=0.868578;RPB=0.164257;SGB=32.2261;VDB=0.277086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.7:28304009 chr07:028304009 0 W/28304009-28304009 FN2375 SNP C -> T AC=1;AN=192;BQB=0.684458;DP=5163;DP4=2612,2217,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.59674e-12;MQSB=1;RPB=0.489015;SGB=71.8591;VDB=0.421748;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.7:28318798 chr07:028318798 0 W/28318798-28318798 FN928-S Single Base Substitution G-T INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN1027-S.SNP.7:28320185 chr07:028320185 0 W/28320185-28320185 FN1027-S Single Base Substitution G-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1725-S.SNP.7:28340584 chr07:028340584 0 W/28340584-28340584 FN1725-S SNP T -> C AC=1;AN=188;BQB=0.0378798;DP=3282;DP4=1963,1245,22,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.38594e-10;MQSB=0.901858;RPB=0.459881;SGB=-162.829;VDB=0.958708;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.7:28342803 chr07:028342803 0 W/28342803-28342803 FN4304-S SNP C -> A AC=2;AN=170;BQB=0.962012;DP=2115;DP4=829,1209,3,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.4654e-07;MQSB=0.924396;RPB=0.525856;SGB=47.8722;VDB=0.717018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.7:28347063 chr07:028347063 0 W/28347063-28347063 FN3298-S SNP C -> G AC=1;AN=184;BQB=0.884462;DP=3863;DP4=1941,1805,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.3259e-09;MQSB=0.914823;RPB=0.487413;SGB=20.7533;VDB=0.757462;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H151Q|591|LOC_Os07g47410|protein_coding|CODING|LOC_Os07g47410.1|1|1) FN4142-S.SNP.7:28348821 chr07:028348821 0 W/28348821-28348821 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.99207;DP=2613;DP4=971,1527,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.73222e-07;MQSB=0.718159;RPB=0.521647;SGB=52.3148;VDB=0.889027;EFF=INTRON(MODIFIER||||591|LOC_Os07g47410|protein_coding|CODING|LOC_Os07g47410.1|2|1) FN1477-S.SNP.7:28349841 chr07:028349841 0 W/28349841-28349841 FN1477-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN4093-S.SNP.7:28356133 chr07:028356133 0 W/28356133-28356133 FN4093-S SNP C -> T AC=1;AN=182;BQB=0.75507;DP=3040;DP4=1566,1375,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.85868e-06;MQSB=0.999331;RPB=0.500021;SGB=13.1007;VDB=0.918943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.7:28357690 chr07:028357690 0 W/28357690-28357690 FN1176-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN872-S.SNP.7:28360621 chr07:028360621 0 W/28360621-28360621 FN872-S Single Base Substitution A-T INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1224-S.SNP.7:28365873 chr07:028365873 0 W/28365873-28365873 FN1224-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os07g47440 retrotransposon protein, putative, unclassified, expressed SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3369-S.SNP.7:28369339 chr07:028369339 0 W/28369339-28369339 FN3369-S SNP A -> T AC=1;AN=184;BQB=0.84671;DP=3346;DP4=1585,1627,15,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.77839e-16;MQSB=0.636359;RPB=0.869034;SGB=99.14;VDB=0.807492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.7:28370149 chr07:028370149 0 W/28370149-28370149 FN2191-S SNP C -> A AC=1;AN=190;BQB=0.756295;DP=4967;DP4=2202,2425,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.9007e-06;MQSB=0.365666;RPB=0.0869546;SGB=18.552;VDB=0.51205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.7:28376166 chr07:028376166 0 W/28376166-28376166 FN2488 SNP A -> T AC=1;AN=200;BQB=0.88747;DP=5511;DP4=3058,2117,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42538e-08;MQSB=0.97943;RPB=0.562412;SGB=63.4749;VDB=0.580439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.7:28376193 chr07:028376193 0 W/28376193-28376193 FN3543-S SNP C -> A AC=1;AN=188;BQB=0.994736;DP=3381;DP4=1659,1578,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.53438e-10;MQSB=0.98927;RPB=0.81188;SGB=53.7007;VDB=0.841004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.7:28384521 chr07:028384521 0 W/28384521-28384521 FN3377-S SNP G -> A AC=1;AN=184;BQB=0.587585;DP=2791;DP4=1318,1396,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000185486;MQSB=0.890548;RPB=0.905139;SGB=18.1394;VDB=0.00314254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.7:28385928 chr07:028385928 0 W/28385928-28385928 FN3851-S SNP G -> C AC=1;AN=158;BQB=0.72779;DP=2580;DP4=1137,1340,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.56886e-05;MQSB=0.934395;RPB=0.500769;SGB=20.5959;VDB=0.620767;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.7:28399521 chr07:028399521 0 W/28399521-28399521 FN4304-S SNP C -> G AC=2;AN=170;BQB=0.939838;DP=2269;DP4=1099,1121,11,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.31411e-10;MQSB=0.952596;RPB=0.954989;SGB=41.7633;VDB=0.146101;EFF=UTR_5_PRIME(MODIFIER||2872||591|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.2|1|1),INTRON(MODIFIER||||484|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.4|1|1),INTRON(MODIFIER||||573|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.3|2|1),INTRON(MODIFIER||||591|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.1|1|1) FN4304-S.SNP.7:28399544 chr07:028399544 0 W/28399544-28399544 FN4304-S SNP T -> C AC=2;AN=170;BQB=0.998773;DP=2330;DP4=1123,1130,10,4;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.2395e-09;MQSB=0.925136;RPB=0.832896;SGB=38.3207;VDB=0.103932;EFF=UTR_5_PRIME(MODIFIER||2895||591|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.2|1|1),INTRON(MODIFIER||||484|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.4|1|1),INTRON(MODIFIER||||573|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.3|2|1),INTRON(MODIFIER||||591|LOC_Os07g47490|protein_coding|CODING|LOC_Os07g47490.1|1|1) FN3401-S.SNP.7:28415632 chr07:028415632 0 W/28415632-28415632 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.980439;DP=3628;DP4=1728,1756,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.1364e-11;MQSB=0.895304;RPB=0.507933;SGB=89.4385;VDB=0.643723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.7:28415811 chr07:028415811 0 W/28415811-28415811 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3448-S.SNP.7:28418906 chr07:028418906 0 W/28418906-28418906 FN3448-S SNP G -> A AC=2;AN=184;BQB=0.70291;DP=2965;DP4=1343,1469,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.61021e-11;MQSB=0.932692;RPB=0.845645;SGB=103.004;VDB=0.00620804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.7:28418906 chr07:028418906 0 W/28418906-28418906 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.47642;DP=3018;DP4=1340,1545,9,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08456e-11;MQSB=0.652824;RPB=0.718457;SGB=98.9552;VDB=0.752248;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.7:28418906 chr07:028418906 0 W/28418906-28418906 FN4122-S SNP G -> A AC=2;AN=182;BQB=0.932971;DP=3230;DP4=1482,1612,12,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.10457e-16;MQSB=0.931775;RPB=0.955368;SGB=134.329;VDB=0.465903;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.7:28418906 chr07:028418906 0 W/28418906-28418906 FN4173-S SNP G -> A AC=2;AN=170;BQB=0.971836;DP=2597;DP4=1127,1341,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.5404e-13;MQSB=0.894703;RPB=0.283672;SGB=72.7472;VDB=0.00253171;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.7:28418906 chr07:028418906 0 W/28418906-28418906 FN937-S Single Base Substitution G-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN411-S.SNP.7:28421356 chr07:028421356 0 W/28421356-28421356 FN411-S Single Base Substitution G-T INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN964-S.SNP.7:28423376 chr07:028423376 0 W/28423376-28423376 FN964-S Single Base Substitution G-T INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1682-S.SNP.7:28433068 chr07:028433068 0 W/28433068-28433068 FN1682-S SNP G -> C AC=2;AN=188;BQB=0.254534;DP=3608;DP4=1779,1748,32,35;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.60776e-31;MQSB=0.949223;RPB=0.8826;SGB=-10.8278;VDB=0.421405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A833P|1081|LOC_Os07g47530|protein_coding|CODING|LOC_Os07g47530.1|22|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A833P|943|LOC_Os07g47530|protein_coding|CODING|LOC_Os07g47530.2|22|1) FN-364.SNP.7:28437879 chr07:028437879 0 W/28437879-28437879 FN-364 Single Base Substitution A-T INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN968-S.SNP.7:28445362 chr07:028445362 0 W/28445362-28445362 FN968-S Single Base Substitution G-A INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN4099-S.SNP.7:28459550 chr07:028459550 0 W/28459550-28459550 FN4099-S SNP G -> A AC=1;AN=182;BQB=0.87026;DP=3106;DP4=1671,1343,11,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.93027e-10;MQSB=0.975184;RPB=0.923314;SGB=80.1982;VDB=0.317528;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.7:28460680 chr07:028460680 0 W/28460680-28460680 FN1324-S Single Base Substitution G-T INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1324-S.SNP.7:28460681 chr07:028460681 0 W/28460681-28460681 FN1324-S Single Base Substitution G-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN796-S.SNP.7:28469355 chr07:028469355 0 W/28469355-28469355 FN796-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN3569-S.SNP.7:28479262 chr07:028479262 0 W/28479262-28479262 FN3569-S SNP T -> G AC=2;AN=188;BQB=0.990806;DP=2755;DP4=1323,1323,22,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.87461e-24;MQSB=0.964775;RPB=0.435518;SGB=135.196;VDB=0.728763;EFF=UTR_3_PRIME(MODIFIER||1678||379|LOC_Os07g47650|protein_coding|CODING|LOC_Os07g47650.1|3|1) FN3485-S.SNP.7:28482643 chr07:028482643 0 W/28482643-28482643 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.805255;DP=2863;DP4=1394,1358,27,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.9413e-23;MQSB=0.998806;RPB=0.652243;SGB=175.352;VDB=0.160103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.7:28489791 chr07:028489791 0 W/28489791-28489791 FN2553-S SNP G -> T AC=1;AN=198;BQB=0.625054;DP=4121;DP4=1627,2216,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.56334e-05;MQSB=0.974262;RPB=0.183122;SGB=18.5788;VDB=0.00580621;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.7:28490090 chr07:028490090 0 W/28490090-28490090 FN3518-S SNP A -> T AC=2;AN=188;BQB=0.326052;DP=2485;DP4=1237,1174,8,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.69137e-05;MQSB=0.983288;RPB=0.595993;SGB=43.0708;VDB=0.924761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.7:28495527 chr07:028495527 0 W/28495527-28495527 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.00881277;DP=2268;DP4=1401,805,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03351e-05;MQSB=0.762611;RPB=0.944611;SGB=27.0464;VDB=0.502802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P250L|445|LOC_Os07g47700|protein_coding|CODING|LOC_Os07g47700.1|1|1) FN2232-S.SNP.7:28498883 chr07:028498883 0 W/28498883-28498883 FN2232-S SNP T -> C AC=1;AN=190;BQB=0.0103667;DP=4824;DP4=2198,2042,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000414594;MQB=6.55209e-10;MQSB=0.265074;RPB=0.953254;SGB=-93.6523;VDB=0.849241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.7:28499813 chr07:028499813 0 W/28499813-28499813 FN3519-S SNP C -> T AC=2;AN=188;BQB=0.737922;DP=2935;DP4=1443,1377,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.56232e-14;MQSB=0.773527;RPB=0.999412;SGB=94.4119;VDB=0.966124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.7:28499814 chr07:028499814 0 W/28499814-28499814 FN3519-S SNP T -> A AC=2;AN=188;BQB=0.940098;DP=2951;DP4=1443,1408,10,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.57566e-14;MQSB=0.769631;RPB=0.999484;SGB=51.5091;VDB=0.84586;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.7:28504945 chr07:028504945 0 W/28504945-28504945 FN-400 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.7:28504945 chr07:028504945 0 W/28504945-28504945 FN400-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN2659-S.SNP.7:28506560 chr07:028506560 0 W/28506560-28506560 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.0940197;DP=4910;DP4=2069,2589,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.33515e-07;MQSB=0.952602;RPB=0.992934;SGB=49.6594;VDB=0.979123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.7:28510712 chr07:028510712 0 W/28510712-28510712 FN1516-S Single Base Substitution G-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2599-S.SNP.7:28520027 chr07:028520027 0 W/28520027-28520027 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.00923276;DP=4012;DP4=1923,1894,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=27;MQ0F=0.16675;MQB=0.979109;MQSB=4.43296e-07;RPB=0.791655;SGB=9.3494;VDB=0.956114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A461T|1964|LOC_Os07g47740|protein_coding|CODING|LOC_Os07g47740.1|1|1) FN3673-S.SNP.7:28524366 chr07:028524366 0 W/28524366-28524366 FN3673-S SNP C -> T AC=2;AN=190;BQB=0.953046;DP=2726;DP4=1448,1173,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.11101e-13;MQSB=0.990786;RPB=0.924235;SGB=99.1879;VDB=0.0470253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.7:28531362 chr07:028531362 0 W/28531362-28531362 FN3851-S SNP G -> C AC=1;AN=158;BQB=0.950392;DP=2680;DP4=1403,1209,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.19345e-05;MQSB=0.914891;RPB=0.724132;SGB=29.5899;VDB=0.92219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.7:28532432 chr07:028532432 0 W/28532432-28532432 FN1251-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g47750 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN1251-S.SNP.7:28532433 chr07:028532433 0 W/28532433-28532433 FN1251-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os07g47750 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN1718-S.SNP.7:28537160 chr07:028537160 0 W/28537160-28537160 FN1718-S SNP G -> A AC=2;AN=188;BQB=0.968682;DP=2756;DP4=1209,1451,15,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.98247e-12;MQSB=0.892054;RPB=0.938571;SGB=-220.078;VDB=0.588156;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.7:28539233 chr07:028539233 0 W/28539233-28539233 FN487-S Single Base Substitution A-G INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN3992-S.SNP.7:28539344 chr07:028539344 0 W/28539344-28539344 FN3992-S SNP A -> T AC=1;AN=168;BQB=0.605913;DP=2714;DP4=1271,1271,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.60855e-07;MQSB=0.995835;RPB=0.117297;SGB=43.3113;VDB=0.0710039;EFF=INTRON(MODIFIER||||195|LOC_Os07g47780|protein_coding|CODING|LOC_Os07g47780.1|4|1),INTRON(MODIFIER||||187|LOC_Os07g47780|protein_coding|CODING|LOC_Os07g47780.2|4|1) FN4258-S.SNP.7:28543043 chr07:028543043 0 W/28543043-28543043 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.979661;DP=2839;DP4=1394,1332,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.169778;MQB=0.759963;MQSB=0;RPB=0.447862;SGB=24.5502;VDB=0.392568;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.7:28553160 chr07:028553160 0 W/28553160-28553160 FN886-S Single Base Substitution G-A INTRON HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1097-S.SNP.7:28562917 chr07:028562917 0 W/28562917-28562917 FN1097-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3627-S.SNP.7:28565149 chr07:028565149 0 W/28565149-28565149 FN3627-S SNP C -> A AC=1;AN=190;BQB=0.803344;DP=3192;DP4=1795,1297,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05759e-05;MQSB=0.968057;RPB=0.990104;SGB=32.5467;VDB=0.850567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.7:28577275 chr07:028577275 0 W/28577275-28577275 FN2198-S SNP C -> T AC=2;AN=190;BQB=0.135636;DP=4887;DP4=2230,2253,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204625;MQB=1.18266e-13;MQSB=0.750828;RPB=0.225441;SGB=59.414;VDB=0.361344;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.7:28582309 chr07:028582309 0 W/28582309-28582309 FN-190 Single Base Substitution A-G INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1363-S.SNP.7:28586049 chr07:028586049 0 W/28586049-28586049 FN1363-S Single Base Substitution T-G INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1641-S.SNP.7:28588910 chr07:028588910 0 W/28588910-28588910 FN1641-S Single Base Substitution T-C INTRON HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN812-S.SNP.7:28588960 chr07:028588960 0 W/28588960-28588960 FN812-S Single Base Substitution A-G INTRON HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN892-S.SNP.7:28594036 chr07:028594036 0 W/28594036-28594036 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN580-S.SNP.7:28594714 chr07:028594714 0 W/28594714-28594714 FN580-S Single Base Substitution T-C INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3472-S.SNP.7:28594862 chr07:028594862 0 W/28594862-28594862 FN3472-S SNP A -> G AC=1;AN=184;BQB=0.086382;DP=2694;DP4=1417,1192,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.30068e-08;MQSB=0.377021;RPB=0.379602;SGB=67.4439;VDB=0.670885;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.7:28596639 chr07:028596639 0 W/28596639-28596639 FN2460 SNP C -> T AC=2;AN=200;BQB=0.714412;DP=4427;DP4=2177,2017,17,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.89397e-16;MQSB=0.928813;RPB=0.898679;SGB=97.9523;VDB=0.887511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T134I|791|LOC_Os07g47870|protein_coding|CODING|LOC_Os07g47870.1|2|1) FN3872-S.SNP.7:28599400 chr07:028599400 0 W/28599400-28599400 FN3872-S SNP T -> A AC=2;AN=158;BQB=0.999625;DP=2567;DP4=1196,1279,12,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.76167e-09;MQSB=0.994718;RPB=0.992284;SGB=68.9144;VDB=0.934958;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.7:28600239 chr07:028600239 0 W/28600239-28600239 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN-71.SNP.7:28600893 chr07:028600893 0 W/28600893-28600893 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN4077-S.SNP.7:28607191 chr07:028607191 0 W/28607191-28607191 FN4077-S SNP T -> C AC=1;AN=182;BQB=0.289236;DP=3212;DP4=1618,1505,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00373599;MQB=7.14828e-05;MQSB=0.00304023;RPB=0.615825;SGB=39.1386;VDB=0.970691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.7:28614819 chr07:028614819 0 W/28614819-28614819 FN3807-S SNP T -> G AC=2;AN=190;BQB=0.514087;DP=2608;DP4=1282,1211,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00115031;MQB=3.64218e-10;MQSB=0.297337;RPB=0.654909;SGB=112.85;VDB=0.924438;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q147H|385|LOC_Os07g47910|protein_coding|CODING|LOC_Os07g47910.1|2|1) FN896-S.SNP.7:28618241 chr07:028618241 0 W/28618241-28618241 FN896-S Single Base Substitution G-A INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2617-S.SNP.7:28619369 chr07:028619369 0 W/28619369-28619369 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.619751;DP=4533;DP4=2372,1928,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0114714;MQB=9.48493e-07;MQSB=4.1154e-09;RPB=0.304177;SGB=12.5396;VDB=0.129695;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.7:28621709 chr07:028621709 0 W/28621709-28621709 W360-2S-2 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g47920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN594-S.SNP.7:28623912 chr07:028623912 0 W/28623912-28623912 FN594-S Single Base Substitution C-A INTERGENIC HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3871-S.SNP.7:28641946 chr07:028641946 0 W/28641946-28641946 FN3871-S SNP G -> T AC=1;AN=158;BQB=0.987985;DP=2280;DP4=991,1202,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.2381e-08;MQSB=0.906522;RPB=0.54309;SGB=68.9144;VDB=0.514804;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A422|520|LOC_Os07g47950|protein_coding|CODING|LOC_Os07g47950.1|8|1) FN-338.SNP.7:28645260 chr07:028645260 0 W/28645260-28645260 FN-338 Single Base Substitution C-T INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN3343-S.SNP.7:28662851 chr07:028662851 0 W/28662851-28662851 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.886084;DP=3264;DP4=1597,1567,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.26906e-13;MQSB=0.898279;RPB=0.860312;SGB=70.9657;VDB=0.748172;EFF=UTR_3_PRIME(MODIFIER||215||1439|LOC_Os07g48000|protein_coding|CODING|LOC_Os07g48000.1|3|1) FN1702-S.SNP.7:28664299 chr07:028664299 0 W/28664299-28664299 FN1702-S SNP C -> T AC=1;AN=188;BQB=0.0287323;DP=3724;DP4=1813,1872,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.46679e-06;MQSB=0.9915;RPB=0.696093;SGB=-57.5324;VDB=0.0248122;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G1195|1439|LOC_Os07g48000|protein_coding|CODING|LOC_Os07g48000.1|1|1) FN3607-S.SNP.7:28677582 chr07:028677582 0 W/28677582-28677582 FN3607-S SNP G -> A AC=2;AN=190;BQB=0.671425;DP=3401;DP4=1641,1589,25,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.40653e-19;MQSB=0.968026;RPB=0.897141;SGB=132.055;VDB=0.999685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.7:28678909 chr07:028678909 0 W/28678909-28678909 FN1448-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-312.SNP.7:28682163 chr07:028682163 0 W/28682163-28682163 FN-312 Single Base Substitution A-C INTERGENIC HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1506-S.SNP.7:28682892 chr07:028682892 0 W/28682892-28682892 FN1506-S Single Base Substitution C-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2138-S.SNP.7:28684491 chr07:028684491 0 W/28684491-28684491 FN2138-S SNP G -> A AC=2;AN=168;BQB=8.23089e-05;DP=3343;DP4=1618,1528,40,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.80773e-13;MQSB=0.0262949;RPB=0.0520299;SGB=-528.603;VDB=0.0540326;EFF=INTRON(MODIFIER||||314|LOC_Os07g48040|protein_coding|CODING|LOC_Os07g48040.1|1|1) W554-1-1.SNP.7:28687544 chr07:028687544 0 W/28687544-28687544 W554-1-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2619-S.SNP.7:28687858 chr07:028687858 0 W/28687858-28687858 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.963056;DP=4643;DP4=2324,2040,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000215378;MQB=1.05665e-12;MQSB=0.985347;RPB=0.990717;SGB=52.7004;VDB=0.715991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:28697034 chr07:028697034 0 W/28697034-28697034 FN2218-S SNP A -> G AC=1;AN=190;BQB=0.981341;DP=4425;DP4=2093,1640,18,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8871e-13;MQSB=0.0151209;RPB=0.744709;SGB=28.9731;VDB=0.102096;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.7:28697581 chr07:028697581 0 W/28697581-28697581 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.979747;DP=2791;DP4=1207,1505,8,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.46773e-13;MQSB=0.978182;RPB=0.863725;SGB=84.7091;VDB=0.574043;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.7:28705904 chr07:028705904 0 W/28705904-28705904 FN2690-S SNP C -> T AC=1;AN=200;BQB=0.221964;DP=4522;DP4=2345,1893,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.30557e-13;MQSB=0.278172;RPB=0.976556;SGB=50.3263;VDB=0.277949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.7:28706113 chr07:028706113 0 W/28706113-28706113 FN2474 SNP G -> T AC=1;AN=200;BQB=0.115941;DP=4287;DP4=2120,1953,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.7646e-15;MQSB=0.972692;RPB=0.364395;SGB=-5.84819;VDB=0.53873;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN-232 Single Base Substitution T-A INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-81.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN-81 Single Base Substitution T-A INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1133-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN1133-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1229-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN1229-S Single Base Substitution T-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1290-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN1290-S Single Base Substitution T-A INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1353-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN1353-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1431-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN1431-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN2179-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN2179-S SNP T -> A AC=2;AN=168;BQB=0.679452;DP=3416;DP4=1645,1733,5,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.19599e-09;MQSB=0.953532;RPB=0.967054;SGB=8.48315;VDB=0.481104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN2244-S SNP T -> A AC=1;AN=190;BQB=0.990287;DP=4815;DP4=2134,2446,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.9708e-12;MQSB=0.922234;RPB=0.0616813;SGB=60.9777;VDB=0.0464703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN3386-S SNP T -> A AC=2;AN=184;BQB=0.769708;DP=3393;DP4=1449,1834,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.26749e-14;MQSB=0.995492;RPB=0.199822;SGB=98.4821;VDB=0.143175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN3492-S SNP T -> A AC=2;AN=184;BQB=0.79004;DP=3228;DP4=1317,1789,8,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.72253e-16;MQSB=0.793081;RPB=0.3592;SGB=116.569;VDB=0.235869;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN3505-S SNP T -> A AC=2;AN=188;BQB=0.972531;DP=3121;DP4=1275,1766,7,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05323e-13;MQSB=0.990467;RPB=0.93794;SGB=94.4119;VDB=0.170967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN3713-S SNP T -> A AC=2;AN=190;BQB=0.963721;DP=2991;DP4=1302,1573,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.5233e-12;MQSB=0.845562;RPB=0.155563;SGB=94.6341;VDB=0.368948;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN4100-S SNP T -> A AC=2;AN=182;BQB=0.678634;DP=3086;DP4=1307,1658,23,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.28418e-28;MQSB=0.997236;RPB=0.175512;SGB=201.991;VDB=0.362513;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN743-S Single Base Substitution T-A INTERGENIC HOMO SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN833-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN833-S Single Base Substitution T-A INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN916-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN916-S Single Base Substitution T-A INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN955-S.SNP.7:28706966 chr07:028706966 0 W/28706966-28706966 FN955-S Single Base Substitution T-A INTERGENIC HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN_N1-116-1.SNP.7:28710271 chr07:028710271 0 W/28710271-28710271 FN_N1-116-1 Single Base Substitution A-G HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN854-S.SNP.7:28722525 chr07:028722525 0 W/28722525-28722525 FN854-S Single Base Substitution G-A INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN267-S.SNP.7:28737531 chr07:028737531 0 W/28737531-28737531 FN267-S Single Base Substitution C-T INTRON HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3933-S.SNP.7:28750250 chr07:028750250 0 W/28750250-28750250 FN3933-S SNP C -> T AC=2;AN=158;BQB=0.742228;DP=2414;DP4=1112,1148,15,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.12085e-13;MQSB=0.995595;RPB=0.850159;SGB=56.991;VDB=0.959108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.7:28750574 chr07:028750574 0 W/28750574-28750574 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN319-S.SNP.7:28751629 chr07:028751629 0 W/28751629-28751629 FN319-S Single Base Substitution A-C INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN483-S.SNP.7:28751856 chr07:028751856 0 W/28751856-28751856 FN483-S Single Base Substitution T-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2392.SNP.7:28754322 chr07:028754322 0 W/28754322-28754322 FN2392 SNP C -> A AC=2;AN=200;BQB=0.429663;DP=4441;DP4=1898,2187,21,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.35068e-21;MQSB=0.916811;RPB=0.972644;SGB=130.399;VDB=0.291297;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.7:28758685 chr07:028758685 0 W/28758685-28758685 FN734-S Single Base Substitution A-G INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3678-S.SNP.7:28768236 chr07:028768236 0 W/28768236-28768236 FN3678-S SNP A -> G AC=1;AN=190;BQB=0.999938;DP=2911;DP4=1429,1316,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.97281e-07;MQSB=0.803831;RPB=0.996274;SGB=36.1006;VDB=0.302226;EFF=INTRON(MODIFIER||||425|LOC_Os07g48160|protein_coding|CODING|LOC_Os07g48160.1|13|1) FN1195-S.SNP.7:28769454 chr07:028769454 0 W/28769454-28769454 FN1195-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2629-S.SNP.7:28770681 chr07:028770681 0 W/28770681-28770681 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.51768;DP=5084;DP4=2324,2549,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.2134e-09;MQSB=0.80704;RPB=0.905582;SGB=65.5058;VDB=0.88396;EFF=INTRON(MODIFIER||||1006|LOC_Os07g48170|protein_coding|CODING|LOC_Os07g48170.1|10|1) FN1279-S.SNP.7:28779024 chr07:028779024 0 W/28779024-28779024 FN1279-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1711-S.SNP.7:28801994 chr07:028801994 0 W/28801994-28801994 FN1711-S SNP C -> T AC=1;AN=188;BQB=0.00734572;DP=2249;DP4=1064,1146,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.365496;MQB=0.712641;MQSB=0;RPB=0.854517;SGB=7.0815;VDB=0.770755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:28805464 chr07:028805464 0 W/28805464-28805464 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.900028;DP=4760;DP4=2099,2324,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11736e-10;MQSB=0.167347;RPB=0.89945;SGB=60.9777;VDB=0.324826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.7:28807593 chr07:028807593 0 W/28807593-28807593 FN2460 SNP G -> A AC=1;AN=200;BQB=0.998275;DP=4436;DP4=2301,1837,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.12365e-06;MQSB=0.989279;RPB=0.946185;SGB=-16.1361;VDB=0.890648;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.7:28812390 chr07:028812390 0 W/28812390-28812390 FN2426 SNP G -> A AC=1;AN=200;BQB=0.0307599;DP=4470;DP4=1953,2177,21,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.56505e-18;MQSB=0.745349;RPB=0.758667;SGB=155.578;VDB=0.905943;EFF=INTRON(MODIFIER||||626|LOC_Os07g48229|protein_coding|CODING|LOC_Os07g48229.1|6|1) FN-67.SNP.7:28820061 chr07:028820061 0 W/28820061-28820061 FN-67 Single Base Substitution G-A INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN-136.SNP.7:28825616 chr07:028825616 0 W/28825616-28825616 FN-136 Single Base Substitution A-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1097-S.SNP.7:28827503 chr07:028827503 0 W/28827503-28827503 FN1097-S Single Base Substitution A-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1467-S.SNP.7:28828224 chr07:028828224 0 W/28828224-28828224 FN1467-S Single Base Substitution C-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1497-S.SNP.7:28828542 chr07:028828542 0 W/28828542-28828542 FN1497-S Single Base Substitution C-T INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN4140-S.SNP.7:28833235 chr07:028833235 0 W/28833235-28833235 FN4140-S SNP G -> T AC=2;AN=170;BQB=0.972218;DP=2832;DP4=1292,1475,8,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.19471e-15;MQSB=0.988987;RPB=0.222642;SGB=105.627;VDB=0.957395;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S118*|184|LOC_Os07g48270|protein_coding|CODING|LOC_Os07g48270.1|3|1) FN2493.SNP.7:28841511 chr07:028841511 0 W/28841511-28841511 FN2493 SNP G -> T AC=1;AN=200;BQB=0.934304;DP=4759;DP4=2193,2279,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.18624e-13;MQSB=0.542051;RPB=0.963188;SGB=50.3263;VDB=0.739441;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.7:28846562 chr07:028846562 0 W/28846562-28846562 FN891-S Single Base Substitution A-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN601-S.SNP.7:28848212 chr07:028848212 0 W/28848212-28848212 FN601-S Single Base Substitution A-T INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN959-S.SNP.7:28856528 chr07:028856528 0 W/28856528-28856528 FN959-S Single Base Substitution A-T INTRON HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN3840-S.SNP.7:28868512 chr07:028868512 0 W/28868512-28868512 FN3840-S SNP A -> C AC=2;AN=190;BQB=0.680729;DP=2938;DP4=1296,1518,12,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.01947e-18;MQSB=0.999519;RPB=0.95641;SGB=92.9626;VDB=0.525213;EFF=UTR_5_PRIME(MODIFIER||2340||640|LOC_Os07g48310|protein_coding|CODING|LOC_Os07g48310.1|1|1) FN2711-S.SNP.7:28871435 chr07:028871435 0 W/28871435-28871435 FN2711-S SNP T -> A AC=1;AN=200;BQB=0.521968;DP=4489;DP4=2033,2286,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.29069e-15;MQSB=0.999024;RPB=0.972681;SGB=83.5316;VDB=0.951594;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.7:28875343 chr07:028875343 0 W/28875343-28875343 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2163-S.SNP.7:28880697 chr07:028880697 0 W/28880697-28880697 FN2163-S SNP T -> C AC=2;AN=168;BQB=0.328904;DP=3955;DP4=2086,1785,16,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.12789e-12;MQSB=0.91142;RPB=0.886574;SGB=51.3545;VDB=0.502285;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.7:28880849 chr07:028880849 0 W/28880849-28880849 FN4166-S SNP T -> G AC=2;AN=170;BQB=0.998907;DP=2739;DP4=1266,1376,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.19226e-11;MQSB=0.998581;RPB=0.0792784;SGB=65.8619;VDB=0.00453322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.7:28882176 chr07:028882176 0 W/28882176-28882176 FN3511-S SNP T -> C AC=1;AN=188;BQB=0.446247;DP=3248;DP4=1744,1376,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17069e-05;MQSB=0.981159;RPB=0.0157392;SGB=10.8165;VDB=0.143537;EFF=UTR_5_PRIME(MODIFIER||13||534|LOC_Os07g48330|protein_coding|CODING|LOC_Os07g48330.1|1|1) FN985-S.SNP.7:28885059 chr07:028885059 0 W/28885059-28885059 FN985-S Single Base Substitution C-T INTRON HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4119-S.SNP.7:28887090 chr07:028887090 0 W/28887090-28887090 FN4119-S SNP T -> A AC=2;AN=182;BQB=0.658516;DP=2151;DP4=1310,790,11,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.83431e-08;MQSB=0.652531;RPB=0.850311;SGB=71.1765;VDB=0.19943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.7:28887714 chr07:028887714 0 W/28887714-28887714 FN1227-S Single Base Substitution G-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN3807-S.SNP.7:28887892 chr07:028887892 0 W/28887892-28887892 FN3807-S SNP C -> T AC=2;AN=190;BQB=0.302659;DP=2600;DP4=1407,973,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.79692e-06;MQSB=0.976622;RPB=0.0311841;SGB=57.4238;VDB=0.593014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.7:28890689 chr07:028890689 0 W/28890689-28890689 FN1179-S Single Base Substitution A-T INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN840-S.SNP.7:28901329 chr07:028901329 0 W/28901329-28901329 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN2121-S.SNP.7:28914225 chr07:028914225 0 W/28914225-28914225 FN2121-S SNP C -> T AC=2;AN=168;BQB=0.857186;DP=3893;DP4=1782,2048,29,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.62305e-22;MQSB=0.852798;RPB=0.426354;SGB=-164.861;VDB=0.78227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.7:28933587 chr07:028933587 0 W/28933587-28933587 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.705272;DP=5227;DP4=2494,2404,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18057e-11;MQSB=0.993285;RPB=0.257963;SGB=-11.8999;VDB=0.231395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.7:28956813 chr07:028956813 0 W/28956813-28956813 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.265709;DP=5060;DP4=2391,2365,8,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.56788e-14;MQSB=0.797317;RPB=0.690521;SGB=54.3062;VDB=0.997672;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.7:28985807 chr07:028985807 0 W/28985807-28985807 FN378-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN1606-S.SNP.7:29004699 chr07:029004699 0 W/29004699-29004699 FN1606-S Single Base Substitution C-T INTRON HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2086-S.SNP.7:29006172 chr07:029006172 0 W/29006172-29006172 FN2086-S SNP T -> C AC=1;AN=168;BQB=0.00717298;DP=3209;DP4=1560,1596,10,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.00956e-09;MQSB=0.707716;RPB=0.719423;SGB=-10.6335;VDB=0.805525;EFF=UTR_3_PRIME(MODIFIER||363||343|LOC_Os07g48490|protein_coding|CODING|LOC_Os07g48490.2|6|1),UTR_3_PRIME(MODIFIER||363||292|LOC_Os07g48490|protein_coding|CODING|LOC_Os07g48490.4|5|1) FN318-S.SNP.7:29021001 chr07:029021001 0 W/29021001-29021001 FN318-S Single Base Substitution T-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN318-S.SNP.7:29021002 chr07:029021002 0 W/29021002-29021002 FN318-S Single Base Substitution G-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3679-S.SNP.7:29023159 chr07:029023159 0 W/29023159-29023159 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.763075;DP=2739;DP4=1318,1279,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8349e-10;MQSB=0.51596;RPB=0.986038;SGB=60.9777;VDB=0.0682775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.7:29026348 chr07:029026348 0 W/29026348-29026348 FN2609-S SNP A -> T AC=2;AN=198;BQB=0.208989;DP=4325;DP4=2238,1792,47,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.16518e-41;MQSB=0.996965;RPB=0.213307;SGB=279.084;VDB=0.0861622;EFF=UTR_3_PRIME(MODIFIER||1198||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.1|3|1),UTR_3_PRIME(MODIFIER||1198||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.2|4|1),INTRON(MODIFIER||||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.3|2|1) FN2374.SNP.7:29028455 chr07:029028455 0 W/29028455-29028455 FN2374 SNP A -> T AC=1;AN=192;BQB=0.613842;DP=5156;DP4=2479,2450,8,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.72793e-08;MQSB=0.902267;RPB=0.599587;SGB=16.0922;VDB=0.211747;EFF=UTR_3_PRIME(MODIFIER||3305||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.1|3|1),UTR_3_PRIME(MODIFIER||3305||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.2|4|1),UTR_3_PRIME(MODIFIER||3305||180|LOC_Os07g48520|protein_coding|CODING|LOC_Os07g48520.3|3|1) FN1247-S.SNP.7:29032272 chr07:029032272 0 W/29032272-29032272 FN1247-S Single Base Substitution A-G INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN3280-S.SNP.7:29040218 chr07:029040218 0 W/29040218-29040218 FN3280-S SNP T -> A AC=2;AN=184;BQB=0.99268;DP=2854;DP4=1438,1266,21,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.52818e-16;MQSB=0.959181;RPB=0.688802;SGB=29.6292;VDB=0.445804;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.7:29051731 chr07:029051731 0 W/29051731-29051731 FN1337-S Single Base Substitution G-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-372.SNP.7:29056836 chr07:029056836 0 W/29056836-29056836 FN-372 Single Base Substitution C-T INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN553-S.SNP.7:29058470 chr07:029058470 0 W/29058470-29058470 FN553-S Single Base Substitution G-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN793-S.SNP.7:29058930 chr07:029058930 0 W/29058930-29058930 FN793-S Single Base Substitution G-C INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1431-S.SNP.7:29063964 chr07:029063964 0 W/29063964-29063964 FN1431-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN2123-S.SNP.7:29066040 chr07:029066040 0 W/29066040-29066040 FN2123-S SNP C -> G AC=1;AN=168;BQB=0.346393;DP=4065;DP4=1979,2027,24,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.96733e-17;MQSB=0.771369;RPB=0.576626;SGB=-94.7442;VDB=0.220193;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.7:29069046 chr07:029069046 0 W/29069046-29069046 FN1094-S Single Base Substitution C-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN3511-S.SNP.7:29070702 chr07:029070702 0 W/29070702-29070702 FN3511-S SNP A -> T AC=1;AN=188;BQB=0.575654;DP=3138;DP4=1698,1317,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.82829e-07;MQSB=0.00679344;RPB=0.871675;SGB=39.5276;VDB=0.892084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.7:29070703 chr07:029070703 0 W/29070703-29070703 FN3511-S SNP C -> T AC=1;AN=188;BQB=0.327001;DP=3147;DP4=1703,1340,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.74361e-07;MQSB=0.00617306;RPB=0.82883;SGB=39.5276;VDB=0.894812;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.7:29075578 chr07:029075578 0 W/29075578-29075578 FN902-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN517-S.SNP.7:29078972 chr07:029078972 0 W/29078972-29078972 FN517-S Single Base Substitution A-G INTRON HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3690-S.SNP.7:29080949 chr07:029080949 0 W/29080949-29080949 FN3690-S SNP G -> A AC=1;AN=190;BQB=0.634278;DP=2809;DP4=1305,1386,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.58801e-07;MQSB=0.774944;RPB=0.865565;SGB=32.5467;VDB=0.42044;EFF=INTRON(MODIFIER||||476|LOC_Os07g48570|protein_coding|CODING|LOC_Os07g48570.1|1|1) FN3690-S.SNP.7:29080951 chr07:029080951 0 W/29080951-29080951 FN3690-S SNP G -> C AC=1;AN=190;BQB=0.646525;DP=2790;DP4=1299,1352,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.78788e-07;MQSB=0.783168;RPB=0.976465;SGB=32.5467;VDB=0.793867;EFF=INTRON(MODIFIER||||476|LOC_Os07g48570|protein_coding|CODING|LOC_Os07g48570.1|1|1) FN577-S.SNP.7:29087848 chr07:029087848 0 W/29087848-29087848 FN577-S Single Base Substitution G-T INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1261-S.SNP.7:29094803 chr07:029094803 0 W/29094803-29094803 FN1261-S Single Base Substitution A-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3902-S.SNP.7:29097753 chr07:029097753 0 W/29097753-29097753 FN3902-S SNP T -> C AC=1;AN=158;BQB=0.982091;DP=2359;DP4=1038,1177,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.35105e-09;MQSB=0.991966;RPB=0.690136;SGB=2.08615;VDB=0.596238;EFF=INTRON(MODIFIER||||611|LOC_Os07g48602|protein_coding|CODING|LOC_Os07g48602.1|1|1) FN1056-S.SNP.7:29109043 chr07:029109043 0 W/29109043-29109043 FN1056-S Single Base Substitution T-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN1056-S.SNP.7:29109044 chr07:029109044 0 W/29109044-29109044 FN1056-S Single Base Substitution G-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN2344.SNP.7:29111957 chr07:029111957 0 W/29111957-29111957 FN2344 SNP T -> A AC=1;AN=192;BQB=0.970425;DP=5286;DP4=2404,2450,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000132356;MQSB=0.991145;RPB=0.723744;SGB=49.2105;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.7:29126800 chr07:029126800 0 W/29126800-29126800 FN416-S Single Base Substitution G-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN4117-S.SNP.7:29127917 chr07:029127917 0 W/29127917-29127917 FN4117-S SNP C -> T AC=2;AN=182;BQB=0.87572;DP=3104;DP4=1381,1606,14,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.45509e-14;MQSB=0.894903;RPB=0.992337;SGB=98.2417;VDB=0.532293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.7:29128182 chr07:029128182 0 W/29128182-29128182 FN2325 SNP G -> C AC=1;AN=192;BQB=0.620364;DP=4440;DP4=1856,2318,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26759e-08;MQSB=0.733972;RPB=0.944344;SGB=39.78;VDB=0.863596;EFF=INTERGENIC(MODIFIER||||||||||1) 705-3.SNP.7:29129031 chr07:029129031 0 W/29129031-29129031 705-3 Single Base Substitution A-T INTERGENIC Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. 705-7.SNP.7:29129031 chr07:029129031 0 W/29129031-29129031 705-7 Single Base Substitution A-T INTERGENIC HET SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN4044-S.SNP.7:29130653 chr07:029130653 0 W/29130653-29130653 FN4044-S SNP G -> C AC=1;AN=168;BQB=0.792795;DP=2906;DP4=1424,1369,5,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000344116;MQB=2.15756e-11;MQSB=0.389002;RPB=0.969422;SGB=78.7577;VDB=0.797068;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ctg|V118L|781|LOC_Os07g48650|protein_coding|CODING|LOC_Os07g48650.1|1|1) FN1585-S.SNP.7:29143300 chr07:029143300 0 W/29143300-29143300 FN1585-S Single Base Substitution C-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2625-S.SNP.7:29143312 chr07:029143312 0 W/29143312-29143312 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.689194;DP=4649;DP4=2030,2356,10,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0002151;MQB=1.621e-07;MQSB=0.164663;RPB=0.271723;SGB=45.1159;VDB=0.7277;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.7:29147884 chr07:029147884 0 W/29147884-29147884 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.999185;DP=3722;DP4=1699,1921,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.72146e-11;MQSB=0.999984;RPB=0.386715;SGB=53.3568;VDB=0.639128;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.7:29149618 chr07:029149618 0 W/29149618-29149618 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.910701;DP=3049;DP4=1409,1540,15,9;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.0147589;MQB=1.01358e-12;MQSB=0.060624;RPB=0.971229;SGB=102.753;VDB=0.498871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.7:29153524 chr07:029153524 0 W/29153524-29153524 FN1685-S SNP T -> A AC=1;AN=188;BQB=0.0243622;DP=3207;DP4=2086,1086,19,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.22931e-09;MQSB=0.949529;RPB=0.796101;SGB=-40.1048;VDB=0.831117;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.7:29158586 chr07:029158586 0 W/29158586-29158586 FN-136 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2472.SNP.7:29170377 chr07:029170377 0 W/29170377-29170377 FN2472 SNP C -> T AC=1;AN=200;BQB=0.84649;DP=5262;DP4=2430,2545,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.9676e-10;MQSB=0.683328;RPB=0.983012;SGB=39.9056;VDB=0.999723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.7:29181488 chr07:029181488 0 W/29181488-29181488 FN1227-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2403.SNP.7:29194649 chr07:029194649 0 W/29194649-29194649 FN2403 SNP T -> A AC=1;AN=200;BQB=0.610497;DP=4894;DP4=2190,2327,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3505e-10;MQSB=0.998828;RPB=0.987994;SGB=69.1109;VDB=0.52706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.7:29201219 chr07:029201219 0 W/29201219-29201219 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.274666;DP=3272;DP4=1504,1592,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.64504e-06;MQSB=0.026984;RPB=0.653017;SGB=64.5316;VDB=0.226437;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.7:29201219 chr07:029201219 0 W/29201219-29201219 FN997-S Single Base Substitution G-A INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3472-S.SNP.7:29201768 chr07:029201768 0 W/29201768-29201768 FN3472-S SNP G -> C AC=1;AN=184;BQB=0.993953;DP=3112;DP4=1374,1645,10,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44753e-14;MQSB=0.987237;RPB=0.690682;SGB=107.526;VDB=0.930867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.7:29201920 chr07:029201920 0 W/29201920-29201920 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.985261;DP=2874;DP4=1397,1366,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52488e-10;MQSB=0.991217;RPB=0.955149;SGB=67.3108;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.7:29205616 chr07:029205616 0 W/29205616-29205616 FN-140 Single Base Substitution G-T INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN982-S.SNP.7:29205672 chr07:029205672 0 W/29205672-29205672 FN982-S Single Base Substitution A-T INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2691-S.SNP.7:29207589 chr07:029207589 0 W/29207589-29207589 FN2691-S SNP T -> C AC=1;AN=200;BQB=0.50204;DP=4307;DP4=2198,1858,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77309e-08;MQSB=0.704038;RPB=0.843065;SGB=1.46408;VDB=0.827148;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.7:29218901 chr07:029218901 0 W/29218901-29218901 FN807-S Single Base Substitution T-A INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. W423-5-1.SNP.7:29222337 chr07:029222337 0 W/29222337-29222337 W423-5-1 Single Base Substitution T-C INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2774-S.SNP.7:29223862 chr07:029223862 0 W/29223862-29223862 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.9946;DP=2570;DP4=557,1781,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.31919e-05;MQSB=5.50664e-14;RPB=0.985234;SGB=36.5539;VDB=0.357224;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.7:29235791 chr07:029235791 0 W/29235791-29235791 FN968-S Single Base Substitution C-T INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN-380.SNP.7:29237236 chr07:029237236 0 W/29237236-29237236 FN-380 Single Base Substitution A-G INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN429-S.SNP.7:29249124 chr07:029249124 0 W/29249124-29249124 FN429-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1496-S.SNP.7:29253137 chr07:029253137 0 W/29253137-29253137 FN1496-S Single Base Substitution G-A INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1496-S.SNP.7:29253138 chr07:029253138 0 W/29253138-29253138 FN1496-S Single Base Substitution G-A INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1619-S.SNP.7:29253604 chr07:029253604 0 W/29253604-29253604 FN1619-S Single Base Substitution A-G INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2084-S.SNP.7:29256247 chr07:029256247 0 W/29256247-29256247 FN2084-S SNP A -> T AC=1;AN=168;BQB=0.994234;DP=3803;DP4=2054,1697,17,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.27685e-18;MQSB=0.845341;RPB=0.93;SGB=28.5146;VDB=0.133893;EFF=INTRON(MODIFIER||||524|LOC_Os07g48890|protein_coding|CODING|LOC_Os07g48890.1|3|1) FN3697-S.SNP.7:29257915 chr07:029257915 0 W/29257915-29257915 FN3697-S SNP T -> A AC=2;AN=190;BQB=0.303123;DP=2921;DP4=1448,1256,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44727e-07;MQSB=0.979561;RPB=0.946375;SGB=60.9777;VDB=0.642658;EFF=INTRON(MODIFIER||||524|LOC_Os07g48890|protein_coding|CODING|LOC_Os07g48890.1|8|1) FN3707-S.SNP.7:29261699 chr07:029261699 0 W/29261699-29261699 FN3707-S SNP G -> T AC=1;AN=190;BQB=0.998894;DP=2330;DP4=1343,887,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.37438e-05;MQSB=0.908494;RPB=0.590995;SGB=39.9877;VDB=0.484466;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S35|177|LOC_Os07g48900|protein_coding|CODING|LOC_Os07g48900.1|1|1) FN3288-S.SNP.7:29272652 chr07:029272652 0 W/29272652-29272652 FN3288-S SNP C -> G AC=1;AN=184;BQB=0.772538;DP=2903;DP4=1399,1402,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.92809e-06;MQSB=0.995734;RPB=0.775104;SGB=32.2261;VDB=0.399491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K458N|597|LOC_Os07g48920|protein_coding|CODING|LOC_Os07g48920.1|12|1) FN-248.SNP.7:29276486 chr07:029276486 0 W/29276486-29276486 FN-248 Single Base Substitution A-T INTRON HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN568-S.SNP.7:29278921 chr07:029278921 0 W/29278921-29278921 FN568-S Single Base Substitution A-G INTRON HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2429.SNP.7:29285248 chr07:029285248 0 W/29285248-29285248 FN2429 SNP A -> C AC=2;AN=200;BQB=0.61096;DP=4683;DP4=2387,1884,25,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.96084e-27;MQSB=0.999758;RPB=0.165316;SGB=170.056;VDB=0.979102;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.7:29296513 chr07:029296513 0 W/29296513-29296513 FN702-S Single Base Substitution T-A INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN4187-S.SNP.7:29307411 chr07:029307411 0 W/29307411-29307411 FN4187-S SNP C -> G AC=1;AN=170;BQB=0.972103;DP=2534;DP4=1233,1222,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.00748e-07;MQSB=0.987063;RPB=0.835745;SGB=27.9928;VDB=0.358712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A586G|690|LOC_Os07g48970|protein_coding|CODING|LOC_Os07g48970.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A684G|704|LOC_Os07g48970|protein_coding|CODING|LOC_Os07g48970.1|10|1) FN2322.SNP.7:29309249 chr07:029309249 0 W/29309249-29309249 FN2322 SNP T -> G AC=2;AN=192;BQB=0.975582;DP=5321;DP4=2637,2415,30,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.54126e-23;MQSB=0.989883;RPB=0.378178;SGB=186.141;VDB=0.695132;EFF=UTR_3_PRIME(MODIFIER||1068||690|LOC_Os07g48970|protein_coding|CODING|LOC_Os07g48970.2|15|1) FN2655-S.SNP.7:29320017 chr07:029320017 0 W/29320017-29320017 FN2655-S SNP T -> A AC=1;AN=200;BQB=0.999849;DP=4883;DP4=2507,2137,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67468e-16;MQSB=0.861208;RPB=0.997339;SGB=83.5316;VDB=0.870614;EFF=INTERGENIC(MODIFIER||||||||||1) FN726-S.SNP.7:29324389 chr07:029324389 0 W/29324389-29324389 FN726-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2550-S.SNP.7:29325225 chr07:029325225 0 W/29325225-29325225 FN2550-S SNP G -> A AC=1;AN=198;BQB=0.0793145;DP=4155;DP4=1828,2059,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.1327e-07;MQSB=0.968297;RPB=0.984134;SGB=31.9395;VDB=0.866788;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.7:29332104 chr07:029332104 0 W/29332104-29332104 FN-133 Single Base Substitution A-G INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN879-S.SNP.7:29351174 chr07:029351174 0 W/29351174-29351174 FN879-S Single Base Substitution T-C INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN_N1-130-1.SNP.7:29353356 chr07:029353356 0 W/29353356-29353356 FN_N1-130-1 Single Base Substitution G-A Homo LOC_Os07g49030 PHD-finger family protein, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN419-S.SNP.7:29357696 chr07:029357696 0 W/29357696-29357696 FN419-S Single Base Substitution A-G INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN-207.SNP.7:29358293 chr07:029358293 0 W/29358293-29358293 FN-207 Single Base Substitution T-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2192-S.SNP.7:29363029 chr07:029363029 0 W/29363029-29363029 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.149231;DP=4462;DP4=2226,1904,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000224115;MQB=6.16919e-08;MQSB=0.958994;RPB=0.403523;SGB=7.21887;VDB=0.631587;EFF=INTERGENIC(MODIFIER||||||||||1) FN987-S.SNP.7:29371334 chr07:029371334 0 W/29371334-29371334 FN987-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os07g49050 expressed protein SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN559-S.SNP.7:29377084 chr07:029377084 0 W/29377084-29377084 FN559-S Single Base Substitution A-G INTRON HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2441.SNP.7:29381667 chr07:029381667 0 W/29381667-29381667 FN2441 SNP A -> G AC=1;AN=200;BQB=0.97577;DP=4502;DP4=2173,2057,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.4386e-13;MQSB=0.857943;RPB=0.937723;SGB=69.1109;VDB=0.057851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.7:29382191 chr07:029382191 0 W/29382191-29382191 FN1240-S Single Base Substitution A-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN224-S.SNP.7:29382530 chr07:029382530 0 W/29382530-29382530 FN224-S Single Base Substitution G-T INTERGENIC HOMO SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN3613-S.SNP.7:29388832 chr07:029388832 0 W/29388832-29388832 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.940882;DP=2749;DP4=1280,1330,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72068e-10;MQSB=0.998835;RPB=0.9501;SGB=76.4186;VDB=0.914226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R227W|566|LOC_Os07g49100|protein_coding|CODING|LOC_Os07g49100.1|1|1) FN3579-S.SNP.7:29410730 chr07:029410730 0 W/29410730-29410730 FN3579-S SNP C -> T AC=2;AN=188;BQB=0.993259;DP=2473;DP4=1502,883,12,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.76399e-11;MQSB=0.000452874;RPB=0.474367;SGB=80.782;VDB=0.659824;EFF=INTERGENIC(MODIFIER||||||||||1) FN408-S.SNP.7:29410749 chr07:029410749 0 W/29410749-29410749 FN408-S Single Base Substitution G-A INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-269.SNP.7:29411324 chr07:029411324 0 W/29411324-29411324 FN-269 Single Base Substitution T-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1527-S.SNP.7:29421832 chr07:029421832 0 W/29421832-29421832 FN1527-S Single Base Substitution C-T INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1527-S.SNP.7:29421833 chr07:029421833 0 W/29421833-29421833 FN1527-S Single Base Substitution A-T INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2452.SNP.7:29422504 chr07:029422504 0 W/29422504-29422504 FN2452 SNP G -> A AC=1;AN=200;BQB=0.717366;DP=5210;DP4=2650,2228,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.91452e-16;MQSB=0.99314;RPB=0.997244;SGB=50.3263;VDB=0.79351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.7:29422508 chr07:029422508 0 W/29422508-29422508 FN2452 SNP G -> A AC=1;AN=200;BQB=0.947096;DP=5204;DP4=2619,2227,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.92714e-13;MQSB=0.998523;RPB=0.895088;SGB=45.1159;VDB=0.780147;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.7:29423503 chr07:029423503 0 W/29423503-29423503 W674-4-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN887-S.SNP.7:29424073 chr07:029424073 0 W/29424073-29424073 FN887-S Single Base Substitution G-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2753-S.SNP.7:29425169 chr07:029425169 0 W/29425169-29425169 FN2753-S SNP C -> A AC=1;AN=200;BQB=0.995596;DP=4635;DP4=2355,2020,6,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0122977;MQB=2.00544e-05;MQSB=0.000112018;RPB=0.963458;SGB=36.6644;VDB=0.441271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.7:29425318 chr07:029425318 0 W/29425318-29425318 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.685408;DP=4283;DP4=2035,2013,15,19;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0116741;MQB=8.84746e-16;MQSB=5.4173e-05;RPB=0.673187;SGB=112.051;VDB=0.69872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3932-S.SNP.7:29426157 chr07:029426157 0 W/29426157-29426157 FN3932-S SNP A -> T AC=2;AN=158;BQB=0.999085;DP=2498;DP4=967,1401,7,12;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=2.14845e-07;MQSB=0.399089;RPB=0.916761;SGB=30.927;VDB=0.482384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.7:29427190 chr07:029427190 0 W/29427190-29427190 FN2178-S SNP G -> C AC=1;AN=168;BQB=0.0357788;DP=3270;DP4=1796,1431,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00642202;MQB=0.00102282;MQSB=0.946272;RPB=0.917015;SGB=-55.5147;VDB=0.810286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.7:29428572 chr07:029428572 0 W/29428572-29428572 FN2444 SNP G -> A AC=1;AN=200;BQB=0.751218;DP=3489;DP4=1553,1641,4,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00057323;MQB=0.000438846;MQSB=0.00943646;RPB=0.16282;SGB=22.2439;VDB=0.133454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G51S|115|LOC_Os07g49130|protein_coding|CODING|LOC_Os07g49130.1|1|1) FN4258-S.SNP.7:29436385 chr07:029436385 0 W/29436385-29436385 FN4258-S SNP G -> A AC=2;AN=170;BQB=0.841162;DP=2577;DP4=1269,1223,12,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.33923e-11;MQSB=0.995683;RPB=0.95804;SGB=62.4192;VDB=0.493461;EFF=INTRON(MODIFIER||||448|LOC_Os07g49150|protein_coding|CODING|LOC_Os07g49150.1|4|1) FN4177-S.SNP.7:29441254 chr07:029441254 0 W/29441254-29441254 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.999673;DP=2573;DP4=1316,1199,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.83184e-09;MQSB=0.99291;RPB=0.798642;SGB=65.6427;VDB=0.986468;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T6|809|LOC_Os07g49160|protein_coding|CODING|LOC_Os07g49160.1|1|1) FN2677-S.SNP.7:29446683 chr07:029446683 0 W/29446683-29446683 FN2677-S SNP A -> T AC=1;AN=200;BQB=0.435636;DP=4062;DP4=1903,1578,6,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00566224;MQB=5.14671e-05;MQSB=0.0817406;RPB=0.928821;SGB=40.2696;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.7:29448306 chr07:029448306 0 W/29448306-29448306 FN1284-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3694-S.SNP.7:29448440 chr07:029448440 0 W/29448440-29448440 FN3694-S SNP C -> G AC=1;AN=190;BQB=0.698825;DP=2771;DP4=1432,1246,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.5783e-06;MQSB=0.951925;RPB=0.832009;SGB=28.9929;VDB=0.695687;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aGg|T324R|715|LOC_Os07g49170|protein_coding|CODING|LOC_Os07g49170.1|1|1) 705-3.SNP.7:29448587 chr07:029448587 0 W/29448587-29448587 705-3 Single Base Substitution A-G INTRON Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. 705-7.SNP.7:29448587 chr07:029448587 0 W/29448587-29448587 705-7 Single Base Substitution A-G INTRON HET SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN2575-S.SNP.7:29451591 chr07:029451591 0 W/29451591-29451591 FN2575-S SNP T -> A AC=1;AN=198;BQB=0.606307;DP=3852;DP4=1953,1692,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.95375e-14;MQSB=0.972399;RPB=0.366843;SGB=25.3006;VDB=0.803946;EFF=INTRON(MODIFIER||||570|LOC_Os07g49180|protein_coding|CODING|LOC_Os07g49180.1|6|1) FN1625-S.SNP.7:29454628 chr07:029454628 0 W/29454628-29454628 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.7:29454628 chr07:029454628 0 W/29454628-29454628 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.688545;DP=4041;DP4=2221,1765,22,13;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=1.60153e-07;MQSB=0;RPB=0.244867;SGB=-4.67716;VDB=0.377098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.7:29457143 chr07:029457143 0 W/29457143-29457143 FN2581-S SNP C -> G AC=1;AN=198;BQB=0.998831;DP=4392;DP4=2059,2033,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.79702e-10;MQSB=0.999278;RPB=0.797472;SGB=9.3494;VDB=0.653102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.7:29459433 chr07:029459433 0 W/29459433-29459433 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-193.SNP.7:29459827 chr07:029459827 0 W/29459827-29459827 FN-193 Single Base Substitution C-T INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN4133-S.SNP.7:29461578 chr07:029461578 0 W/29461578-29461578 FN4133-S SNP A -> G AC=1;AN=182;BQB=0.968889;DP=3233;DP4=1323,1692,5,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.86383e-11;MQSB=0.510033;RPB=0.216003;SGB=11.193;VDB=0.507447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.7:29464451 chr07:029464451 0 W/29464451-29464451 FN3382-S SNP C -> G AC=1;AN=184;BQB=0.847125;DP=2932;DP4=1537,1296,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.30218e-08;MQSB=0.956459;RPB=0.965339;SGB=66.8296;VDB=0.282545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.7:29471494 chr07:029471494 0 W/29471494-29471494 FN3357-S SNP G -> T AC=1;AN=184;BQB=0.974753;DP=2804;DP4=1421,1304,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98002e-05;MQSB=0.969581;RPB=0.98913;SGB=18.1394;VDB=0.846189;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E972*|1874|LOC_Os07g49210|protein_coding|CODING|LOC_Os07g49210.1|6|1);LOF=(LOC_Os07g49210|LOC_Os07g49210|1|1.00);NMD=(LOC_Os07g49210|LOC_Os07g49210|1|1.00) FN3503-S.SNP.7:29477057 chr07:029477057 0 W/29477057-29477057 FN3503-S SNP A -> G AC=2;AN=188;BQB=0.739883;DP=2911;DP4=1497,1355,9,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.41717e-10;MQSB=0.906978;RPB=0.938288;SGB=85.3253;VDB=0.919254;EFF=INTRON(MODIFIER||||338|LOC_Os07g49220|protein_coding|CODING|LOC_Os07g49220.1|3|1) FN406-S.SNP.7:29479561 chr07:029479561 0 W/29479561-29479561 FN406-S Single Base Substitution C-T INTRON HOMO SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN-380.SNP.7:29485421 chr07:029485421 0 W/29485421-29485421 FN-380 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g49240 MRH1, putative, expressed SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2218-S.SNP.7:29495158 chr07:029495158 0 W/29495158-29495158 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.957182;DP=4953;DP4=2164,2454,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000201898;MQB=5.6647e-12;MQSB=0.970193;RPB=0.651837;SGB=49.1985;VDB=0.468295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.7:29495753 chr07:029495753 0 W/29495753-29495753 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1286-S.SNP.7:29501668 chr07:029501668 0 W/29501668-29501668 FN1286-S Single Base Substitution A-G INTRON HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2551-S.SNP.7:29502714 chr07:029502714 0 W/29502714-29502714 FN2551-S SNP G -> T AC=2;AN=198;BQB=0.124174;DP=3690;DP4=1801,1604,27,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.27595e-24;MQSB=0.914151;RPB=0.909341;SGB=55.6079;VDB=0.330754;EFF=SPLICE_SITE_REGION(LOW||||1018|LOC_Os07g49260|protein_coding|CODING|LOC_Os07g49260.1|17|1),INTRON(MODIFIER||||1018|LOC_Os07g49260|protein_coding|CODING|LOC_Os07g49260.1|17|1) FN-92.SNP.7:29503794 chr07:029503794 0 W/29503794-29503794 FN-92 Single Base Substitution A-T INTRON HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN4119-S.SNP.7:29512333 chr07:029512333 0 W/29512333-29512333 FN4119-S SNP T -> C AC=2;AN=182;BQB=0.997729;DP=3139;DP4=1146,1871,15,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.34896e-12;MQSB=0.347483;RPB=0.871853;SGB=93.7308;VDB=0.807884;EFF=UTR_3_PRIME(MODIFIER||134||605|LOC_Os07g49280|protein_coding|CODING|LOC_Os07g49280.1|4|1),UTR_3_PRIME(MODIFIER||698||815|LOC_Os07g49270|protein_coding|CODING|LOC_Os07g49270.1|20|1),INTRON(MODIFIER||||815|LOC_Os07g49270|protein_coding|CODING|LOC_Os07g49270.2|20|1) FN598-S.SNP.7:29522502 chr07:029522502 0 W/29522502-29522502 FN598-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os07g49300 expressed protein SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN1012-S.SNP.7:29526071 chr07:029526071 0 W/29526071-29526071 FN1012-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3341-S.SNP.7:29527292 chr07:029527292 0 W/29527292-29527292 FN3341-S SNP T -> C AC=1;AN=184;BQB=0.99992;DP=2565;DP4=1264,1207,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30431e-08;MQSB=0.998299;RPB=0.578341;SGB=62.3078;VDB=0.864047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V654A|1101|LOC_Os07g49300|protein_coding|CODING|LOC_Os07g49300.1|14|1) FN267-S.SNP.7:29530654 chr07:029530654 0 W/29530654-29530654 FN267-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3534-S.SNP.7:29536557 chr07:029536557 0 W/29536557-29536557 FN3534-S SNP T -> C AC=2;AN=188;BQB=0.929873;DP=2545;DP4=1279,1209,10,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.18254e-10;MQSB=0.962623;RPB=0.163845;SGB=60.7873;VDB=0.381405;EFF=INTRON(MODIFIER||||1245|LOC_Os07g49320|protein_coding|CODING|LOC_Os07g49320.1|6|1) FN2360.SNP.7:29556299 chr07:029556299 0 W/29556299-29556299 FN2360 SNP G -> A AC=1;AN=192;BQB=0.226121;DP=5131;DP4=2475,2263,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.32499e-11;MQSB=0.256821;RPB=0.844495;SGB=75.4235;VDB=0.913755;EFF=UTR_3_PRIME(MODIFIER||522||136|LOC_Os07g49350|protein_coding|CODING|LOC_Os07g49350.1|3|1) FN1190-S.SNP.7:29572152 chr07:029572152 0 W/29572152-29572152 FN1190-S Single Base Substitution C-A INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN872-S.SNP.7:29597806 chr07:029597806 0 W/29597806-29597806 FN872-S Single Base Substitution A-G INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2670-S.SNP.7:29601603 chr07:029601603 0 W/29601603-29601603 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.99147;DP=4083;DP4=1939,1788,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000244918;MQB=4.16063e-13;MQSB=1.56376e-06;RPB=0.620359;SGB=55.5366;VDB=0.884105;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A554T|1180|LOC_Os07g49430|protein_coding|CODING|LOC_Os07g49430.1|4|1) FN3985-S.SNP.7:29603547 chr07:029603547 0 W/29603547-29603547 FN3985-S SNP C -> T AC=1;AN=168;BQB=0.954255;DP=3077;DP4=1712,1230,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.12784e-11;MQSB=0.995594;RPB=0.0428074;SGB=96.481;VDB=0.225323;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P895S|1180|LOC_Os07g49430|protein_coding|CODING|LOC_Os07g49430.1|6|1) FN2691-S.SNP.7:29606933 chr07:029606933 0 W/29606933-29606933 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.51236;DP=5035;DP4=2432,2316,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4287e-10;MQSB=0.99875;RPB=0.221619;SGB=54.6902;VDB=0.0167502;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q584*|818|LOC_Os07g49440|protein_coding|CODING|LOC_Os07g49440.1|3|1);LOF=(LOC_Os07g49440|LOC_Os07g49440|1|1.00);NMD=(LOC_Os07g49440|LOC_Os07g49440|1|1.00) FN750-S.SNP.7:29608725 chr07:029608725 0 W/29608725-29608725 FN750-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g49440 retrotransposon protein, putative, unclassified, expressed SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN-91.SNP.7:29610199 chr07:029610199 0 W/29610199-29610199 FN-91 Single Base Substitution G-A INTERGENIC HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN514-S.SNP.7:29614376 chr07:029614376 0 W/29614376-29614376 FN514-S Single Base Substitution A-G INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2426.SNP.7:29618800 chr07:029618800 0 W/29618800-29618800 FN2426 SNP T -> C AC=1;AN=200;BQB=0.470763;DP=4760;DP4=2169,2314,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.94095e-14;MQSB=0.729824;RPB=0.953477;SGB=114.132;VDB=0.519462;EFF=INTRON(MODIFIER||||742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.1|4|1),INTRON(MODIFIER||||742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.2|3|1),INTRON(MODIFIER||||742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.3|4|1),INTRON(MODIFIER||||742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.4|3|1) FN1529-S.SNP.7:29623321 chr07:029623321 0 W/29623321-29623321 FN1529-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3653-S.SNP.7:29627515 chr07:029627515 0 W/29627515-29627515 FN3653-S SNP G -> T AC=1;AN=190;BQB=0.24451;DP=2676;DP4=1314,1233,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.84998e-05;MQSB=0.942155;RPB=0.807479;SGB=13.4442;VDB=0.971488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A558S|742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A558S|742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A558S|742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.3|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A558S|742|LOC_Os07g49460|protein_coding|CODING|LOC_Os07g49460.4|9|1) FN980-S.SNP.7:29634713 chr07:029634713 0 W/29634713-29634713 FN980-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os07g49480 KIP1, putative, expressed SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-142.SNP.7:29639996 chr07:029639996 0 W/29639996-29639996 FN-142 Single Base Substitution A-G INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3345-S.SNP.7:29641997 chr07:029641997 0 W/29641997-29641997 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.846604;DP=3332;DP4=1860,1402,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=2.15336e-06;MQSB=0.0814839;RPB=0.629612;SGB=2.23696;VDB=0.58437;EFF=INTRON(MODIFIER||||588|LOC_Os07g49490|protein_coding|CODING|LOC_Os07g49490.1|2|1) FN343-S.SNP.7:29652224 chr07:029652224 0 W/29652224-29652224 FN343-S Single Base Substitution G-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2463.SNP.7:29652622 chr07:029652622 0 W/29652622-29652622 FN2463 SNP T -> C AC=1;AN=200;BQB=0.862359;DP=5076;DP4=2604,2169,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.08611e-11;MQSB=0.909863;RPB=0.993609;SGB=51.0851;VDB=0.695188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.7:29652660 chr07:029652660 0 W/29652660-29652660 FN2415 SNP T -> C AC=2;AN=200;BQB=0.413707;DP=4785;DP4=2558,1902,28,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.48086e-28;MQSB=0.999044;RPB=0.631745;SGB=115.456;VDB=0.160085;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.7:29661266 chr07:029661266 0 W/29661266-29661266 FN-99 Single Base Substitution A-C INTRON HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1221-S.SNP.7:29675402 chr07:029675402 0 W/29675402-29675402 FN1221-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2734-S.SNP.7:29675824 chr07:029675824 0 W/29675824-29675824 FN2734-S SNP T -> A AC=1;AN=200;BQB=0.363152;DP=4406;DP4=2193,2030,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79643e-06;MQSB=0.999987;RPB=0.218485;SGB=-1.74624;VDB=0.337964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.7:29682658 chr07:029682658 0 W/29682658-29682658 FN3287-S SNP G -> T AC=1;AN=184;BQB=0.997236;DP=2810;DP4=1374,1346,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000355872;MQB=1.68533e-12;MQSB=0.551598;RPB=0.905209;SGB=78.0093;VDB=0.426223 FN1423-S.SNP.7:29683820 chr07:029683820 0 W/29683820-29683820 FN1423-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2587-S.SNP.8:1445 chr08:000001445 0 W/1445-1445 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.516473;DP=5137;DP4=2287,2534,12,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.08444e-14;MQSB=0.00822668;RPB=0.542467;SGB=101.266;VDB=0.296401;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.8:3176 chr08:000003176 0 W/3176-3176 FN494-S Single Base Substitution C-T INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1557-S.SNP.8:3376 chr08:000003376 0 W/3376-3376 FN1557-S Single Base Substitution T-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN812-S.SNP.8:6102 chr08:000006102 0 W/6102-6102 FN812-S Single Base Substitution C-T INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2664-S.SNP.8:8305 chr08:000008305 0 W/8305-8305 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.614638;DP=4806;DP4=2219,2284,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95279e-11;MQSB=0.632097;RPB=0.711415;SGB=37.3004;VDB=0.363746;EFF=INTRON(MODIFIER||||213|LOC_Os08g01010|protein_coding|CODING|LOC_Os08g01010.1|1|1) FN-212.SNP.8:8783 chr08:000008783 0 W/8783-8783 FN-212 Single Base Substitution T-C INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-336.SNP.8:8783 chr08:000008783 0 W/8783-8783 FN-336 Single Base Substitution T-C INTERGENIC HOMO SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN1638-S.SNP.8:8783 chr08:000008783 0 W/8783-8783 FN1638-S Single Base Substitution T-C INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2201-S.SNP.8:9519 chr08:000009519 0 W/9519-9519 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.935751;DP=4731;DP4=2228,2209,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.00782e-09;MQSB=0.320936;RPB=0.985768;SGB=71.8647;VDB=0.113368;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.8:13298 chr08:000013298 0 W/13298-13298 FN244-S Single Base Substitution G-T INTRON HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2098-S.SNP.8:13635 chr08:000013635 0 W/13635-13635 FN2098-S SNP A -> G AC=1;AN=168;BQB=2.80848e-07;DP=4039;DP4=1939,2044,25,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.77594e-06;MQSB=0.811615;RPB=0.105985;SGB=-520.572;VDB=0.211269;EFF=INTRON(MODIFIER||||105|LOC_Os08g01020|protein_coding|CODING|LOC_Os08g01020.1|2|1) FN831-S.SNP.8:23601 chr08:000023601 0 W/23601-23601 FN831-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g01030 metal cation transporter, putative, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN773-S.SNP.8:27042 chr08:000027042 0 W/27042-27042 FN773-S Single Base Substitution A-G INTRON HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1375-S.SNP.8:27177 chr08:000027177 0 W/27177-27177 FN1375-S Single Base Substitution T-C INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1007-S.SNP.8:31426 chr08:000031426 0 W/31426-31426 FN1007-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g01040 zinc finger, C3HC4 type domain containing protein, expressed SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN1031-S.SNP.8:37969 chr08:000037969 0 W/37969-37969 FN1031-S Single Base Substitution A-T INTRON HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3282-S.SNP.8:48224 chr08:000048224 0 W/48224-48224 FN3282-S SNP C -> T AC=1;AN=184;BQB=0.932609;DP=2829;DP4=1348,1377,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000183848;MQSB=0.998683;RPB=0.428609;SGB=30.6558;VDB=0.237012;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.8:53085 chr08:000053085 0 W/53085-53085 FN4080-S SNP C -> T AC=1;AN=182;BQB=0.993503;DP=2609;DP4=1004,1413,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.58496e-06;MQSB=0.010278;RPB=0.691228;SGB=10.5899;VDB=0.937763;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.8:53086 chr08:000053086 0 W/53086-53086 FN4080-S SNP A -> T AC=1;AN=182;BQB=0.468675;DP=2612;DP4=1009,1460,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.29487e-05;MQSB=0.011926;RPB=0.662324;SGB=10.5899;VDB=0.881279;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.8:63731 chr08:000063731 0 W/63731-63731 FN4128-S SNP A -> G AC=2;AN=182;BQB=0.904639;DP=2973;DP4=1523,1344,8,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.17879e-12;MQSB=0.88781;RPB=0.721681;SGB=63.7146;VDB=0.0999775;EFF=UTR_3_PRIME(MODIFIER||297||362|LOC_Os08g01090|protein_coding|CODING|LOC_Os08g01090.1|9|1),UTR_3_PRIME(MODIFIER||297||326|LOC_Os08g01090|protein_coding|CODING|LOC_Os08g01090.2|9|1) FN1741-S.SNP.8:75811 chr08:000075811 0 W/75811-75811 FN1741-S SNP C -> A AC=1;AN=188;BQB=0.939743;DP=4111;DP4=2444,1622,17,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.12131e-09;MQSB=0.763074;RPB=0.572753;SGB=-138.632;VDB=0.684703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.8:85853 chr08:000085853 0 W/85853-85853 FN3958-S SNP C -> G AC=1;AN=168;BQB=0.500363;DP=2500;DP4=1024,1372,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.03683e-09;MQSB=0.793854;RPB=0.424943;SGB=9.91396;VDB=0.0464703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.8:91418 chr08:000091418 0 W/91418-91418 FN2119-S SNP T -> C AC=1;AN=168;BQB=0.376964;DP=2965;DP4=1179,1731,7,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.75278e-09;MQSB=0.795591;RPB=0.937815;SGB=-103.201;VDB=0.147375;EFF=INTRON(MODIFIER||||641|LOC_Os08g01130|protein_coding|CODING|LOC_Os08g01130.1|2|1) FN3050-S.SNP.8:93559 chr08:000093559 0 W/93559-93559 FN3050-S SNP T -> C AC=1;AN=184;BQB=0.848838;DP=2908;DP4=1341,1428,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17186e-07;MQSB=0.977899;RPB=0.534038;SGB=49.835;VDB=0.609446;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.8:94764 chr08:000094764 0 W/94764-94764 FN4158-S SNP C -> T AC=1;AN=170;BQB=0.368149;DP=2415;DP4=1188,1142,13,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86885e-09;MQSB=0.858538;RPB=0.998133;SGB=-14.7763;VDB=0.280204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.8:99274 chr08:000099274 0 W/99274-99274 FN3615-S SNP G -> A AC=1;AN=190;BQB=0.99954;DP=1423;DP4=605,655,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000666405;MQSB=4.29716e-07;RPB=0.212485;SGB=53.6492;VDB=0.649234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.8:102954 chr08:000102954 0 W/102954-102954 FN2362 SNP C -> T AC=1;AN=192;BQB=0.110363;DP=4675;DP4=1925,2525,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.841e-09;MQSB=0.979548;RPB=0.845616;SGB=31.4783;VDB=0.988426;EFF=INTRON(MODIFIER||||579|LOC_Os08g01150|protein_coding|CODING|LOC_Os08g01150.1|1|1) FN3768-S.SNP.8:103468 chr08:000103468 0 W/103468-103468 FN3768-S SNP T -> A AC=1;AN=190;BQB=0.899044;DP=2466;DP4=1221,1112,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79909e-07;MQSB=0.98299;RPB=0.994535;SGB=23.6597;VDB=0.964887;EFF=INTRON(MODIFIER||||579|LOC_Os08g01150|protein_coding|CODING|LOC_Os08g01150.1|1|1) FN3699-S.SNP.8:107375 chr08:000107375 0 W/107375-107375 FN3699-S SNP T -> G AC=2;AN=190;BQB=0.931264;DP=3224;DP4=1666,1312,23,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.05547e-21;MQSB=0.96464;RPB=0.668812;SGB=44.5119;VDB=0.107908;EFF=UTR_3_PRIME(MODIFIER||365||579|LOC_Os08g01150|protein_coding|CODING|LOC_Os08g01150.1|2|1) FN-102.SNP.8:114709 chr08:000114709 0 W/114709-114709 FN-102 Single Base Substitution G-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3782-S.SNP.8:119680 chr08:000119680 0 W/119680-119680 FN3782-S SNP A -> G AC=2;AN=190;BQB=0.958515;DP=2757;DP4=1220,1426,16,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.06207e-18;MQSB=0.999843;RPB=0.676326;SGB=107.178;VDB=0.264468;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aCa|I160T|555|LOC_Os08g01180|protein_coding|CODING|LOC_Os08g01180.1|3|1) FN1685-S.SNP.8:137802 chr08:000137802 0 W/137802-137802 FN1685-S SNP A -> T AC=1;AN=188;BQB=0.462652;DP=3589;DP4=1878,1668,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04307e-13;MQSB=0.999231;RPB=0.629006;SGB=48.9658;VDB=0.278313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.8:143556 chr08:000143556 0 W/143556-143556 FN1072-S Single Base Substitution C-A INTRON HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN427-S.SNP.8:157044 chr08:000157044 0 W/157044-157044 FN427-S Single Base Substitution G-A INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2611-S.SNP.8:157511 chr08:000157511 0 W/157511-157511 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.991848;DP=5058;DP4=2325,2401,21,32;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.81972e-30;MQSB=0.901665;RPB=0.830085;SGB=180.871;VDB=0.404549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.8:158611 chr08:000158611 0 W/158611-158611 FN3288-S SNP T -> A AC=1;AN=184;BQB=0.99886;DP=2422;DP4=1347,1009,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000412882;MQB=9.62612e-06;MQSB=0.113217;RPB=0.443816;SGB=44.2207;VDB=0.0988809;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.8:160744 chr08:000160744 0 W/160744-160744 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2795-S.SNP.8:161509 chr08:000161509 0 W/161509-161509 FN2795-S SNP T -> C AC=2;AN=198;BQB=0.531239;DP=4166;DP4=2099,1872,25,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000240038;MQB=4.3104e-20;MQSB=0.909381;RPB=0.425623;SGB=41.2518;VDB=0.18809;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.8:161789 chr08:000161789 0 W/161789-161789 FN1124-S Single Base Substitution G-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3810-S.SNP.8:166687 chr08:000166687 0 W/166687-166687 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.985096;DP=2614;DP4=1431,994,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.71835e-06;MQSB=0.0372916;RPB=0.189626;SGB=25.439;VDB=0.416035;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.8:169016 chr08:000169016 0 W/169016-169016 FN441-S Single Base Substitution T-A INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN856-S.SNP.8:169579 chr08:000169579 0 W/169579-169579 FN856-S Single Base Substitution C-A INTERGENIC HOMO SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2658-S.SNP.8:180658 chr08:000180658 0 W/180658-180658 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.814171;DP=4546;DP4=2320,1923,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.44902e-15;MQSB=0.998719;RPB=0.880553;SGB=104.921;VDB=0.678627;EFF=INTRON(MODIFIER||||167|LOC_Os08g01274|protein_coding|CODING|LOC_Os08g01274.1|3|1) FN2713-S.SNP.8:182684 chr08:000182684 0 W/182684-182684 FN2713-S SNP G -> T AC=1;AN=200;BQB=0.991908;DP=4462;DP4=2088,2079,16,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29357e-14;MQSB=0.978985;RPB=0.628493;SGB=28.752;VDB=0.620355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.8:186579 chr08:000186579 0 W/186579-186579 FN1471-S SNP C -> T AC=1;AN=188;BQB=0.128046;DP=3382;DP4=1489,1837,10,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6934e-13;MQSB=0.814783;RPB=0.681168;SGB=-42.845;VDB=0.714421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.8:188810 chr08:000188810 0 W/188810-188810 FN1124-S Single Base Substitution T-A INTRON HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN-220.SNP.8:195797 chr08:000195797 0 W/195797-195797 FN-220 Single Base Substitution G-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2696-S.SNP.8:202429 chr08:000202429 0 W/202429-202429 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.707474;DP=4922;DP4=2518,2062,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6248e-09;MQSB=0.581576;RPB=0.281732;SGB=51.0851;VDB=0.0186913;EFF=INTRON(MODIFIER||||382|LOC_Os08g01320|protein_coding|CODING|LOC_Os08g01320.1|2|1),INTRON(MODIFIER||||329|LOC_Os08g01320|protein_coding|CODING|LOC_Os08g01320.2|3|1) FN-407.SNP.8:213248 chr08:000213248 0 W/213248-213248 FN-407 Single Base Substitution C-T INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.8:213248 chr08:000213248 0 W/213248-213248 FN407-S Single Base Substitution C-T INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN3468-S.SNP.8:217629 chr08:000217629 0 W/217629-217629 FN3468-S SNP A -> C AC=2;AN=184;BQB=0.759992;DP=2569;DP4=1353,1086,17,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.12928e-13;MQSB=0.249416;RPB=0.795633;SGB=112.047;VDB=0.834635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.8:217991 chr08:000217991 0 W/217991-217991 FN3468-S SNP T -> C AC=2;AN=184;BQB=0.825924;DP=2645;DP4=1164,1399,19,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.92159e-15;MQSB=0.976987;RPB=0.365103;SGB=121.091;VDB=0.525682;EFF=INTERGENIC(MODIFIER||||||||||1) FN594-S.SNP.8:226819 chr08:000226819 0 W/226819-226819 FN594-S Single Base Substitution A-T INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3323-S.SNP.8:230211 chr08:000230211 0 W/230211-230211 FN3323-S SNP T -> A AC=1;AN=184;BQB=0.98107;DP=2599;DP4=1372,1122,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00107648;MQSB=0.958082;RPB=0.874159;SGB=26.1347;VDB=0.69274;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V177|495|LOC_Os08g01360|protein_coding|CODING|LOC_Os08g01360.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V177|495|LOC_Os08g01360|protein_coding|CODING|LOC_Os08g01360.2|5|1),UTR_5_PRIME(MODIFIER||76||293|LOC_Os08g01360|protein_coding|CODING|LOC_Os08g01360.3|3|1) FN3862-S.SNP.8:234713 chr08:000234713 0 W/234713-234713 FN3862-S SNP C -> T AC=1;AN=158;BQB=0.825094;DP=1968;DP4=847,1051,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.48188e-06;MQSB=0.911072;RPB=0.862669;SGB=38.3284;VDB=0.627244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.8:236627 chr08:000236627 0 W/236627-236627 FN2364 SNP C -> G AC=1;AN=192;BQB=0.942484;DP=4512;DP4=2206,1847,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.5543e-06;MQSB=0.685771;RPB=0.184439;SGB=-16.4617;VDB=0.445805;EFF=INTERGENIC(MODIFIER||||||||||1) FN777-S.SNP.8:243174 chr08:000243174 0 W/243174-243174 FN777-S Single Base Substitution T-A INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN3701-S.SNP.8:247390 chr08:000247390 0 W/247390-247390 FN3701-S SNP G -> A AC=1;AN=190;BQB=0.854774;DP=3030;DP4=1426,1446,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79976e-11;MQSB=0.916642;RPB=0.849856;SGB=71.8647;VDB=0.877517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.8:248535 chr08:000248535 0 W/248535-248535 FN1531-S Single Base Substitution T-C INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1492-S.SNP.8:252852 chr08:000252852 0 W/252852-252852 FN1492-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g01390 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2719-S.SNP.8:253466 chr08:000253466 0 W/253466-253466 FN2719-S SNP G -> A AC=1;AN=200;BQB=0.792013;DP=4868;DP4=2274,2373,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205423;MQB=1.98412e-07;MQSB=0.983898;RPB=0.84625;SGB=54.2646;VDB=0.349756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R372H|1610|LOC_Os08g01390|protein_coding|CODING|LOC_Os08g01390.1|5|1) FN1011-S.SNP.8:270186 chr08:000270186 0 W/270186-270186 FN1011-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g01410 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3504-S.SNP.8:270772 chr08:000270772 0 W/270772-270772 FN3504-S SNP C -> T AC=1;AN=188;BQB=0.986315;DP=2471;DP4=1218,1188,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02494e-06;MQSB=0.997945;RPB=0.415475;SGB=48.979;VDB=0.205941;EFF=INTRON(MODIFIER||||337|LOC_Os08g01410|protein_coding|CODING|LOC_Os08g01410.1|1|1) FN_814-7-1.SNP.8:270907 chr08:000270907 0 W/270907-270907 FN_814-7-1 Single Base Substitution G-C Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3500-S.SNP.8:272053 chr08:000272053 0 W/272053-272053 FN3500-S SNP T -> A AC=1;AN=188;BQB=0.987525;DP=2331;DP4=1168,1088,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.51883e-05;MQSB=0.513046;RPB=0.951376;SGB=26.2637;VDB=0.781662;EFF=UTR_5_PRIME(MODIFIER||364||337|LOC_Os08g01410|protein_coding|CODING|LOC_Os08g01410.1|1|1) FN1517-S.SNP.8:273151 chr08:000273151 0 W/273151-273151 FN1517-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3366-S.SNP.8:286240 chr08:000286240 0 W/286240-286240 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.677451;DP=3080;DP4=1367,1620,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87089e-08;MQSB=0.973582;RPB=0.532802;SGB=49.835;VDB=0.669445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.8:286815 chr08:000286815 0 W/286815-286815 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.989511;DP=2197;DP4=988,1130,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.786e-05;MQSB=0.768538;RPB=0.882778;SGB=39.9877;VDB=0.205475;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.8:296419 chr08:000296419 0 W/296419-296419 FN403-S Single Base Substitution G-A INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-171.SNP.8:297893 chr08:000297893 0 W/297893-297893 FN-171 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g01480 cytochrome P450, putative, expressed SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3495-S.SNP.8:300448 chr08:000300448 0 W/300448-300448 FN3495-S SNP A -> G AC=2;AN=188;BQB=0.564753;DP=3014;DP4=1428,1510,16,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.17087e-19;MQSB=0.963976;RPB=0.113793;SGB=113.937;VDB=0.0498292;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.8:309671 chr08:000309671 0 W/309671-309671 FN511-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g01510 cytochrome P450, putative, expressed SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1440-S.SNP.8:316294 chr08:000316294 0 W/316294-316294 FN1440-S Single Base Substitution C-G INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN1718-S.SNP.8:317276 chr08:000317276 0 W/317276-317276 FN1718-S SNP A -> T AC=2;AN=188;BQB=0.917656;DP=2990;DP4=1590,1326,23,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.26511e-18;MQSB=0.995298;RPB=0.914043;SGB=37.9474;VDB=0.185048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.8:326978 chr08:000326978 0 W/326978-326978 FN2779-S SNP T -> C AC=1;AN=198;BQB=0.894572;DP=4105;DP4=1812,1991,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=7.87147e-13;MQSB=0.370917;RPB=0.633796;SGB=15.7299;VDB=0.959167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.8:327826 chr08:000327826 0 W/327826-327826 FN2188-S SNP C -> A AC=1;AN=190;BQB=0.517271;DP=3197;DP4=1522,1442,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=5.0386e-09;MQSB=0.518089;RPB=0.750658;SGB=50.3161;VDB=0.00745261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.8:328151 chr08:000328151 0 W/328151-328151 FN3791-S SNP A -> G AC=2;AN=190;BQB=0.860903;DP=3177;DP4=1355,1656,9,10;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=3.67361e-06;MQSB=0.0129863;RPB=0.785212;SGB=80.9724;VDB=0.316956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.8:328953 chr08:000328953 0 W/328953-328953 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.64981;DP=2862;DP4=1473,1266,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20103e-06;MQSB=0.996659;RPB=0.628612;SGB=20.7533;VDB=0.873613;EFF=UTR_5_PRIME(MODIFIER||73||222|LOC_Os08g01550|protein_coding|CODING|LOC_Os08g01550.1|1|1) FN3814-S.SNP.8:333794 chr08:000333794 0 W/333794-333794 FN3814-S SNP T -> A AC=2;AN=190;BQB=0.974266;DP=2615;DP4=1278,1237,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.47056e-10;MQSB=0.999329;RPB=0.823184;SGB=80.9724;VDB=0.184419;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.8:341237 chr08:000341237 0 W/341237-341237 FN1151-S Single Base Substitution G-C INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2322.SNP.8:341716 chr08:000341716 0 W/341716-341716 FN2322 SNP C -> T AC=1;AN=192;BQB=0.994846;DP=5023;DP4=2343,2378,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.23322e-08;MQSB=0.00125496;RPB=0.759946;SGB=36.607;VDB=0.987255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.8:352161 chr08:000352161 0 W/352161-352161 FN-247 Single Base Substitution A-T UTR_3_PRIME HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-247.SNP.8:352162 chr08:000352162 0 W/352162-352162 FN-247 Single Base Substitution G-T UTR_3_PRIME HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3834-S.SNP.8:352229 chr08:000352229 0 W/352229-352229 FN3834-S SNP T -> A AC=2;AN=190;BQB=0.927391;DP=2676;DP4=1329,1254,7,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71557e-11;MQSB=0.704914;RPB=0.518383;SGB=68.0854;VDB=0.0992991;EFF=UTR_3_PRIME(MODIFIER||318||337|LOC_Os08g01590|protein_coding|CODING|LOC_Os08g01590.2|2|1),UTR_3_PRIME(MODIFIER||318||337|LOC_Os08g01590|protein_coding|CODING|LOC_Os08g01590.1|1|1) FN1333-S.SNP.8:355391 chr08:000355391 0 W/355391-355391 FN1333-S Single Base Substitution T-G INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2322.SNP.8:362352 chr08:000362352 0 W/362352-362352 FN2322 SNP A -> G AC=1;AN=192;BQB=0.99987;DP=5238;DP4=2570,2299,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.48533e-15;MQSB=0.423851;RPB=0.908442;SGB=-9.12519;VDB=0.648839;EFF=INTRON(MODIFIER||||289|LOC_Os08g01610|protein_coding|CODING|LOC_Os08g01610.3|7|1) FN2459.SNP.8:377857 chr08:000377857 0 W/377857-377857 FN2459 SNP C -> T AC=1;AN=200;BQB=0.0255572;DP=5223;DP4=2453,2426,12,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.04893e-15;MQSB=0.97858;RPB=0.844946;SGB=-79.233;VDB=0.578829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.8:384536 chr08:000384536 0 W/384536-384536 FN2475 SNP A -> G AC=1;AN=200;BQB=0.457916;DP=4225;DP4=2255,1572,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.021e-11;MQSB=0.543926;RPB=0.20614;SGB=37.3004;VDB=0.0225533;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G102|166|LOC_Os08g01660|protein_coding|CODING|LOC_Os08g01660.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G102|163|LOC_Os08g01660|protein_coding|CODING|LOC_Os08g01660.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G94|158|LOC_Os08g01660|protein_coding|CODING|LOC_Os08g01660.3|2|1) FN-86.SNP.8:402436 chr08:000402436 0 W/402436-402436 FN-86 Single Base Substitution T-A INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN2574-S.SNP.8:405085 chr08:000405085 0 W/405085-405085 FN2574-S SNP T -> C AC=1;AN=198;BQB=0.998489;DP=4624;DP4=1945,2477,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.60773e-08;MQSB=0.772902;RPB=0.561006;SGB=49.5489;VDB=0.845016;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.8:406748 chr08:000406748 0 W/406748-406748 FN1258-S Single Base Substitution G-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN891-S.SNP.8:410532 chr08:000410532 0 W/410532-410532 FN891-S Single Base Substitution C-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2359.SNP.8:411518 chr08:000411518 0 W/411518-411518 FN2359 SNP T -> C AC=2;AN=192;BQB=0.99632;DP=4896;DP4=2186,1799,19,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.53818e-15;MQSB=0.00229923;RPB=0.969368;SGB=85.3296;VDB=0.631803;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.8:430654 chr08:000430654 0 W/430654-430654 FN-249 Single Base Substitution T-C INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN974-S.SNP.8:435509 chr08:000435509 0 W/435509-435509 FN974-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3810-S.SNP.8:439060 chr08:000439060 0 W/439060-439060 FN3810-S SNP T -> A AC=1;AN=190;BQB=0.284773;DP=3059;DP4=1445,1465,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59185e-07;MQSB=0.959199;RPB=0.482933;SGB=28.9929;VDB=0.0294266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.8:439149 chr08:000439149 0 W/439149-439149 FN3810-S SNP G -> C AC=1;AN=190;BQB=0.74599;DP=3144;DP4=1531,1487,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000118926;MQSB=0.995452;RPB=0.758534;SGB=39.9877;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.8:442577 chr08:000442577 0 W/442577-442577 FN1746-S SNP G -> T AC=1;AN=188;BQB=0.0456715;DP=2067;DP4=639,1387,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17146e-08;MQSB=0.490289;RPB=0.800769;SGB=-38.278;VDB=0.123448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.8:446736 chr08:000446736 0 W/446736-446736 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.684677;DP=4844;DP4=2364,2262,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99105e-09;MQSB=0.998698;RPB=0.947645;SGB=12.7003;VDB=0.738708;EFF=INTRON(MODIFIER||||425|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.1|3|1),INTRON(MODIFIER||||401|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.2|3|1) FN3940-S.SNP.8:447054 chr08:000447054 0 W/447054-447054 FN3940-S SNP T -> C AC=1;AN=158;BQB=0.968308;DP=2418;DP4=1191,1155,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.99453e-06;MQSB=0.902014;RPB=0.983242;SGB=42.6978;VDB=0.443772;EFF=INTRON(MODIFIER||||425|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.1|4|1),INTRON(MODIFIER||||401|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.2|4|1) FN4050-S.SNP.8:449285 chr08:000449285 0 W/449285-449285 FN4050-S SNP C -> T AC=2;AN=168;BQB=0.99995;DP=2981;DP4=1434,1412,24,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.76116e-24;MQSB=0.966609;RPB=0.366022;SGB=185.097;VDB=0.996615;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R318*|425|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.1|9|1),STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R294*|401|LOC_Os08g01740|protein_coding|CODING|LOC_Os08g01740.2|10|1) FN3803-S.SNP.8:451877 chr08:000451877 0 W/451877-451877 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.734694;DP=2890;DP4=1325,1459,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.64045e-16;MQSB=0.994943;RPB=0.810667;SGB=67.0756;VDB=0.139636;EFF=INTRON(MODIFIER||||895|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.1|2|1),INTRON(MODIFIER||||889|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.2|2|1),INTRON(MODIFIER||||585|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.3|2|1) FN2452.SNP.8:451907 chr08:000451907 0 W/451907-451907 FN2452 SNP C -> T AC=1;AN=200;BQB=0.587175;DP=4792;DP4=2265,2217,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36601e-16;MQSB=0.993293;RPB=0.543466;SGB=-80.6278;VDB=0.535894;EFF=INTRON(MODIFIER||||895|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.1|2|1),INTRON(MODIFIER||||889|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.2|2|1),INTRON(MODIFIER||||585|LOC_Os08g01750|protein_coding|CODING|LOC_Os08g01750.3|2|1) FN4260-S.SNP.8:461247 chr08:000461247 0 W/461247-461247 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.993268;DP=2375;DP4=1121,1196,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.91789e-07;MQSB=0.993886;RPB=0.771006;SGB=43.4296;VDB=0.580569;EFF=UTR_3_PRIME(MODIFIER||120||422|LOC_Os08g01760|protein_coding|CODING|LOC_Os08g01760.1|8|1) FN3095-S.SNP.8:462076 chr08:000462076 0 W/462076-462076 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.943975;DP=2538;DP4=1180,1284,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.95153e-09;MQSB=0.994698;RPB=1;SGB=20.7533;VDB=0.923033;EFF=UTR_3_PRIME(MODIFIER||89||285|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.2|6|1),INTRON(MODIFIER||||290|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.1|6|1) FN3095-S.SNP.8:462503 chr08:000462503 0 W/462503-462503 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.99782;DP=2665;DP4=1416,1151,16,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.0191e-15;MQSB=0.983646;RPB=0.921527;SGB=78.0093;VDB=0.76685;EFF=INTRON(MODIFIER||||290|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.1|5|1),INTRON(MODIFIER||||285|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.2|5|1) FN2217-S.SNP.8:463774 chr08:000463774 0 W/463774-463774 FN2217-S SNP C -> A AC=1;AN=190;BQB=0.441952;DP=4928;DP4=2481,2168,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68093e-07;MQSB=0.751978;RPB=0.431974;SGB=18.552;VDB=0.652421;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E124*|290|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.1|3|1),STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E124*|285|LOC_Os08g01770|protein_coding|CODING|LOC_Os08g01770.2|3|1);LOF=(LOC_Os08g01770|LOC_Os08g01770|2|1.00);NMD=(LOC_Os08g01770|LOC_Os08g01770|2|1.00) FN2594-S.SNP.8:466657 chr08:000466657 0 W/466657-466657 FN2594-S SNP C -> T AC=2;AN=198;BQB=0.994163;DP=4234;DP4=2005,2025,15,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.94432e-16;MQSB=0.943311;RPB=0.991498;SGB=31.6811;VDB=0.337945;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.8:469262 chr08:000469262 0 W/469262-469262 FN908-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1309-S.SNP.8:474147 chr08:000474147 0 W/474147-474147 FN1309-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1058-S.SNP.8:476592 chr08:000476592 0 W/476592-476592 FN1058-S Single Base Substitution G-T INTRON HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN-238.SNP.8:501825 chr08:000501825 0 W/501825-501825 FN-238 Single Base Substitution C-A INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1541-S.SNP.8:503670 chr08:000503670 0 W/503670-503670 FN1541-S Single Base Substitution G-A INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. N1-169-2.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-2 Single Base Substitution C-T INTERGENIC HET SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-3 Single Base Substitution C-T INTERGENIC HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-5.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-5 Single Base Substitution C-T INTERGENIC HET SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-7.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-7 Single Base Substitution C-T INTERGENIC HET SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-8 Single Base Substitution C-T INTERGENIC Homo SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.8:506537 chr08:000506537 0 W/506537-506537 N1-169-9 Single Base Substitution C-T INTERGENIC Homo SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN1096-S.SNP.8:507917 chr08:000507917 0 W/507917-507917 FN1096-S Single Base Substitution A-T INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1096-S.SNP.8:507918 chr08:000507918 0 W/507918-507918 FN1096-S Single Base Substitution C-T INTERGENIC HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2202-S.SNP.8:512821 chr08:000512821 0 W/512821-512821 FN2202-S SNP A -> G AC=1;AN=190;BQB=0.962453;DP=4871;DP4=2691,1913,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77042e-11;MQSB=0.72095;RPB=0.627549;SGB=99.1879;VDB=0.627351;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.8:513427 chr08:000513427 0 W/513427-513427 FN961-S Single Base Substitution G-C INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2574-S.SNP.8:523833 chr08:000523833 0 W/523833-523833 FN2574-S SNP T -> C AC=1;AN=198;BQB=0.49977;DP=4081;DP4=2115,1729,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.91642e-06;MQSB=0.783172;RPB=0.96016;SGB=22.1736;VDB=0.973828;EFF=UTR_5_PRIME(MODIFIER||850||398|LOC_Os08g01850|protein_coding|CODING|LOC_Os08g01850.1|1|1) FN1050-S.SNP.8:523969 chr08:000523969 0 W/523969-523969 FN1050-S Single Base Substitution T-C INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN-210.SNP.8:526668 chr08:000526668 0 W/526668-526668 FN-210 Single Base Substitution T-G INTERGENIC HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN2378.SNP.8:526786 chr08:000526786 0 W/526786-526786 FN2378 SNP G -> A AC=1;AN=192;BQB=0.42992;DP=5161;DP4=2561,2250,12,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.74856e-17;MQSB=0.999759;RPB=0.846327;SGB=72.5078;VDB=0.408975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.8:529976 chr08:000529976 0 W/529976-529976 FN2381 SNP G -> A AC=1;AN=192;BQB=0.654379;DP=4603;DP4=2133,2075,14,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.07535e-07;MQSB=0.908882;RPB=0.669339;SGB=12.0478;VDB=0.679639;EFF=INTRON(MODIFIER||||116|LOC_Os08g01859|protein_coding|CODING|LOC_Os08g01859.1|1|1) FN409-S.SNP.8:532431 chr08:000532431 0 W/532431-532431 FN409-S Single Base Substitution C-A INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1215-S.SNP.8:533615 chr08:000533615 0 W/533615-533615 FN1215-S Single Base Substitution C-T INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN831-S.SNP.8:535422 chr08:000535422 0 W/535422-535422 FN831-S Single Base Substitution G-A INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN1050-S.SNP.8:537343 chr08:000537343 0 W/537343-537343 FN1050-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g01870 Rf1, mitochondrial precursor, putative, expressed SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN764-S.SNP.8:542779 chr08:000542779 0 W/542779-542779 FN764-S Single Base Substitution G-A INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-295.SNP.8:546084 chr08:000546084 0 W/546084-546084 FN-295 Single Base Substitution C-T INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3990-S.SNP.8:557730 chr08:000557730 0 W/557730-557730 FN3990-S SNP C -> T AC=1;AN=168;BQB=0.446918;DP=2736;DP4=1438,1213,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.78959e-05;MQSB=0.900293;RPB=0.580704;SGB=61.0344;VDB=0.637244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C196Y|263|LOC_Os08g01910|protein_coding|CODING|LOC_Os08g01910.1|2|1) FN2593-S.SNP.8:559845 chr08:000559845 0 W/559845-559845 FN2593-S SNP T -> A AC=1;AN=198;BQB=0.989675;DP=3946;DP4=1474,2240,8,18;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000253421;MQB=7.34017e-09;MQSB=0.0617851;RPB=0.980989;SGB=113.881;VDB=0.020983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.8:567782 chr08:000567782 0 W/567782-567782 FN2172-S SNP T -> G AC=2;AN=168;BQB=0.000941906;DP=4158;DP4=2050,2039,27,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.88748e-18;MQSB=0.905261;RPB=0.599692;SGB=-362.853;VDB=0.222196;EFF=INTRON(MODIFIER||||937|LOC_Os08g01920|protein_coding|CODING|LOC_Os08g01920.1|7|1) FN3599-S.SNP.8:586655 chr08:000586655 0 W/586655-586655 FN3599-S SNP G -> A AC=1;AN=188;BQB=0.980105;DP=2498;DP4=1192,1265,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.49063e-08;MQSB=0.986508;RPB=0.972319;SGB=43.0708;VDB=0.354724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.8:599977 chr08:000599977 0 W/599977-599977 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1573-S.SNP.8:599978 chr08:000599978 0 W/599978-599978 FN1573-S Single Base Substitution T-G INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN-185.SNP.8:603252 chr08:000603252 0 W/603252-603252 FN-185 Single Base Substitution C-A INTERGENIC HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1232-S.SNP.8:608084 chr08:000608084 0 W/608084-608084 FN1232-S Single Base Substitution C-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2583-S.SNP.8:608259 chr08:000608259 0 W/608259-608259 FN2583-S SNP T -> C AC=1;AN=200;BQB=0.60541;DP=4310;DP4=2136,2039,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47677e-09;MQSB=0.000535533;RPB=0.106419;SGB=69.1109;VDB=0.383855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-365.SNP.8:610256 chr08:000610256 0 W/610256-610256 FN-365 Single Base Substitution C-A INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN2797-S.SNP.8:615049 chr08:000615049 0 W/615049-615049 FN2797-S SNP A -> T AC=1;AN=198;BQB=0.852938;DP=4587;DP4=2394,2022,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.86375e-15;MQSB=0.951794;RPB=0.969333;SGB=86.8856;VDB=0.632026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.8:623306 chr08:000623306 0 W/623306-623306 FN1103-S Single Base Substitution A-C INTERGENIC HOMO SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN870-S.SNP.8:624451 chr08:000624451 0 W/624451-624451 FN870-S Single Base Substitution T-C INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN2756-S.SNP.8:626114 chr08:000626114 0 W/626114-626114 FN2756-S SNP T -> C AC=1;AN=200;BQB=0.995979;DP=4795;DP4=2227,2274,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25641e-13;MQSB=0.808829;RPB=0.806546;SGB=42.5108;VDB=0.973483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.8:628917 chr08:000628917 0 W/628917-628917 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.0381069;DP=3799;DP4=2205,1535,25,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.43916e-17;MQSB=0.831887;RPB=0.975387;SGB=-307.385;VDB=0.306769;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.8:636722 chr08:000636722 0 W/636722-636722 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.131635;DP=4885;DP4=1929,2535,18,22;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0223132;MQB=2.2091e-07;MQSB=0.472395;RPB=0.923768;SGB=87.5066;VDB=0.266853;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A7|1463|LOC_Os08g02000|protein_coding|CODING|LOC_Os08g02000.1|1|1) FN1688-S.SNP.8:636823 chr08:000636823 0 W/636823-636823 FN1688-S SNP A -> T AC=2;AN=188;BQB=0.0642369;DP=3798;DP4=1922,1824,18,14;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0242233;MQB=0.123712;MQSB=0.000279987;RPB=0.989008;SGB=-42.845;VDB=0.658493;EFF=INTRON(MODIFIER||||1463|LOC_Os08g02000|protein_coding|CODING|LOC_Os08g02000.1|1|1) FN2083-S.SNP.8:644715 chr08:000644715 0 W/644715-644715 FN2083-S SNP G -> T AC=1;AN=168;BQB=0.000823161;DP=4426;DP4=2081,2131,56,135;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000225938;MQB=0;MQSB=1.31088e-08;RPB=1.90198e-12;SGB=-2430.08;VDB=3.42484e-10;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.8:645050 chr08:000645050 0 W/645050-645050 FN2645-S SNP T -> C AC=2;AN=200;BQB=0.648387;DP=4908;DP4=2574,2112,23,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000814996;MQB=4.55298e-21;MQSB=0.997056;RPB=0.690561;SGB=97.2193;VDB=0.591915;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.8:670877 chr08:000670877 0 W/670877-670877 FN-127 Single Base Substitution C-T INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3714-S.SNP.8:687906 chr08:000687906 0 W/687906-687906 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.831494;DP=3320;DP4=1589,1592,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59663e-06;MQSB=0.94459;RPB=0.430265;SGB=62.7569;VDB=0.565451;EFF=INTRON(MODIFIER||||381|LOC_Os08g02094|protein_coding|CODING|LOC_Os08g02094.1|1|1) FN2305.SNP.8:691012 chr08:000691012 0 W/691012-691012 FN2305 SNP T -> G AC=1;AN=192;BQB=0.979812;DP=5123;DP4=2466,2313,10,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00312317;MQB=4.77687e-09;MQSB=0.979352;RPB=0.179163;SGB=-11.3826;VDB=0.0944894;EFF=INTRON(MODIFIER||||381|LOC_Os08g02094|protein_coding|CODING|LOC_Os08g02094.1|1|1) FN2794-S.SNP.8:693747 chr08:000693747 0 W/693747-693747 FN2794-S SNP C -> T AC=2;AN=198;BQB=0.954763;DP=4505;DP4=2318,1884,37,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.68819e-36;MQSB=0.778923;RPB=0.873319;SGB=287.503;VDB=0.994214;EFF=UTR_3_PRIME(MODIFIER||172||381|LOC_Os08g02094|protein_coding|CODING|LOC_Os08g02094.1|4|1) FN-168.SNP.8:694501 chr08:000694501 0 W/694501-694501 FN-168 Single Base Substitution A-C INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN-13.SNP.8:695114 chr08:000695114 0 W/695114-695114 FN-13 Single Base Substitution C-T INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN540-S.SNP.8:698939 chr08:000698939 0 W/698939-698939 FN540-S Single Base Substitution G-A INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN2128-S.SNP.8:704588 chr08:000704588 0 W/704588-704588 FN2128-S SNP C -> A AC=2;AN=168;BQB=0.904143;DP=4089;DP4=1926,2069,25,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.1835e-25;MQSB=0.956941;RPB=0.923812;SGB=-57.7188;VDB=0.0187816;EFF=UTR_3_PRIME(MODIFIER||2202||838|LOC_Os08g02130|protein_coding|CODING|LOC_Os08g02130.1|16|1),UTR_3_PRIME(MODIFIER||2202||838|LOC_Os08g02130|protein_coding|CODING|LOC_Os08g02130.2|16|1) FN3690-S.SNP.8:720585 chr08:000720585 0 W/720585-720585 FN3690-S SNP C -> A AC=1;AN=190;BQB=0.99741;DP=2815;DP4=1384,1315,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.74985e-07;MQSB=0.866706;RPB=0.944585;SGB=44.5415;VDB=0.567998;EFF=UTR_3_PRIME(MODIFIER||6||419|LOC_Os08g02150|protein_coding|CODING|LOC_Os08g02150.1|1|1) FN-161.SNP.8:724903 chr08:000724903 0 W/724903-724903 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN805-S.SNP.8:733779 chr08:000733779 0 W/733779-733779 FN805-S Single Base Substitution A-T INTRON HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN805-S.SNP.8:733780 chr08:000733780 0 W/733780-733780 FN805-S Single Base Substitution A-T INTRON HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN-307.SNP.8:759081 chr08:000759081 0 W/759081-759081 FN-307 Single Base Substitution G-T INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3525-S.SNP.8:762157 chr08:000762157 0 W/762157-762157 FN3525-S SNP C -> T AC=1;AN=188;BQB=0.942905;DP=3088;DP4=1724,1284,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83327e-07;MQSB=0.994786;RPB=0.390005;SGB=44.4357;VDB=0.321996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.8:762992 chr08:000762992 0 W/762992-762992 FN-286 Single Base Substitution T-C INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3401-S.SNP.8:763273 chr08:000763273 0 W/763273-763273 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.897311;DP=3092;DP4=1869,1099,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.46306e-07;MQSB=0.99294;RPB=0.737907;SGB=44.2207;VDB=0.518745;EFF=UTR_5_PRIME(MODIFIER||13||523|LOC_Os08g02220|protein_coding|CODING|LOC_Os08g02220.1|1|1) FN1424-S.SNP.8:770796 chr08:000770796 0 W/770796-770796 FN1424-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN321-S.SNP.8:772509 chr08:000772509 0 W/772509-772509 FN321-S Single Base Substitution T-G INTERGENIC HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2432.SNP.8:772841 chr08:000772841 0 W/772841-772841 FN2432 SNP C -> T AC=1;AN=200;BQB=0.758603;DP=5340;DP4=2365,2607,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.04297e-11;MQSB=0.897513;RPB=0.964494;SGB=14.3054;VDB=0.0260666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.8:777235 chr08:000777235 0 W/777235-777235 FN2426 SNP T -> A AC=2;AN=200;BQB=0.981806;DP=4369;DP4=2273,1790,44,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.39552e-38;MQSB=0.992613;RPB=0.762798;SGB=179.96;VDB=0.931652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.8:778671 chr08:000778671 0 W/778671-778671 FN3817-S SNP T -> C AC=2;AN=190;BQB=0.896642;DP=3152;DP4=1703,1278,11,16;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=4.80764e-17;MQSB=0.382075;RPB=0.844379;SGB=85.8548;VDB=0.109361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2561-S.SNP.8:779202 chr08:000779202 0 W/779202-779202 FN2561-S SNP G -> A AC=1;AN=198;BQB=0.953171;DP=3905;DP4=1813,1937,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.000722374;MQSB=0.8517;RPB=0.95964;SGB=14.9842;VDB=0.618522;EFF=INTERGENIC(MODIFIER||||||||||1) FN2152-S.SNP.8:782223 chr08:000782223 0 W/782223-782223 FN2152-S SNP A -> G AC=2;AN=168;BQB=0.208868;DP=3832;DP4=1619,2132,22,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.89996e-21;MQSB=0.962756;RPB=0.196158;SGB=-1.15556;VDB=0.722413;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.8:784699 chr08:000784699 0 W/784699-784699 FN3523-S SNP A -> G AC=1;AN=188;BQB=0.998608;DP=2407;DP4=1232,1127,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0195264;MQB=3.03303e-05;MQSB=0.00528408;RPB=0.909763;SGB=53.5223;VDB=0.195805;EFF=INTRON(MODIFIER||||1438|LOC_Os08g02240|protein_coding|CODING|LOC_Os08g02240.1|5|1) FN2214-S.SNP.8:787107 chr08:000787107 0 W/787107-787107 FN2214-S SNP T -> C AC=1;AN=190;BQB=0.893445;DP=4437;DP4=1857,2278,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.191345;MQB=0.910208;MQSB=0;RPB=0.727661;SGB=60.9777;VDB=0.565488;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K1019|1438|LOC_Os08g02240|protein_coding|CODING|LOC_Os08g02240.1|4|1) FN1711-S.SNP.8:790221 chr08:000790221 0 W/790221-790221 FN1711-S SNP C -> T AC=1;AN=188;BQB=0.075565;DP=1660;DP4=787,835,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.146988;MQB=0.946547;MQSB=8.18387e-26;RPB=0.833286;SGB=0.908326;VDB=0.556519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R73Q|1438|LOC_Os08g02240|protein_coding|CODING|LOC_Os08g02240.1|2|1) FN3534-S.SNP.8:798139 chr08:000798139 0 W/798139-798139 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.230041;DP=1956;DP4=1198,699,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000511247;MQB=0.00128265;MQSB=0.999513;RPB=0.984647;SGB=13.3597;VDB=0.976777;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.8:801625 chr08:000801625 0 W/801625-801625 FN1182-S Single Base Substitution G-T INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3935-S.SNP.8:804345 chr08:000804345 0 W/804345-804345 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.719999;DP=2849;DP4=1421,1315,6,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.46979e-10;MQSB=0.819048;RPB=0.417875;SGB=57.6596;VDB=0.878967;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.8:806254 chr08:000806254 0 W/806254-806254 FN684-S Single Base Substitution G-A INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN4021-S.SNP.8:807892 chr08:000807892 0 W/807892-807892 FN4021-S SNP G -> A AC=1;AN=168;BQB=0.992913;DP=2584;DP4=1276,1187,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.30979e-08;MQSB=0.855343;RPB=0.339369;SGB=41.6096;VDB=0.0826157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.8:820179 chr08:000820179 0 W/820179-820179 FN2785-S SNP A -> C AC=1;AN=198;BQB=0.729689;DP=3944;DP4=1608,2036,12,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.73987e-13;MQSB=0.970895;RPB=0.0748073;SGB=79.6954;VDB=0.264631;EFF=INTRON(MODIFIER||||106|LOC_Os08g02270|protein_coding|CODING|LOC_Os08g02270.1|1|1) FN-275.SNP.8:822938 chr08:000822938 0 W/822938-822938 FN-275 Single Base Substitution A-T INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-177.SNP.8:835779 chr08:000835779 0 W/835779-835779 FN-177 Single Base Substitution C-A INTERGENIC HOMO SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1423-S.SNP.8:843792 chr08:000843792 0 W/843792-843792 FN1423-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3850-S.SNP.8:846961 chr08:000846961 0 W/846961-846961 FN3850-S SNP C -> T AC=2;AN=158;BQB=0.997204;DP=2590;DP4=1191,1275,5,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.13302e-09;MQSB=0.93799;RPB=0.985637;SGB=40.8124;VDB=0.863003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.8:851286 chr08:000851286 0 W/851286-851286 FN3394-S SNP T -> A AC=2;AN=184;BQB=0.892364;DP=2754;DP4=1434,1210,17,17;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.25516e-14;MQSB=0.561408;RPB=0.84925;SGB=109.705;VDB=0.768735;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.8:854952 chr08:000854952 0 W/854952-854952 FN1252-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1252-S.SNP.8:855458 chr08:000855458 0 W/855458-855458 FN1252-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3976-S.SNP.8:859176 chr08:000859176 0 W/859176-859176 FN3976-S SNP C -> T AC=1;AN=168;BQB=0.548899;DP=2550;DP4=1184,1259,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04408e-07;MQSB=0.406983;RPB=0.592977;SGB=45.0404;VDB=0.42278;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.8:861279 chr08:000861279 0 W/861279-861279 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.971586;DP=2904;DP4=1340,1490,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.31238e-06;MQSB=0.970234;RPB=0.965977;SGB=35.1773;VDB=0.428039;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.8:863209 chr08:000863209 0 W/863209-863209 FN244-S Single Base Substitution T-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1213-S.SNP.8:873314 chr08:000873314 0 W/873314-873314 FN1213-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN4180-S.SNP.8:878883 chr08:000878883 0 W/878883-878883 FN4180-S SNP A -> T AC=1;AN=170;BQB=0.985525;DP=2620;DP4=1292,1256,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19428e-08;MQSB=0.972148;RPB=0.18989;SGB=61.2001;VDB=0.424233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.8:899465 chr08:000899465 0 W/899465-899465 FN2403 SNP T -> A AC=2;AN=200;BQB=0.847809;DP=4605;DP4=2314,1921,18,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.32492e-15;MQSB=0.888478;RPB=0.903404;SGB=60.747;VDB=0.434081;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.8:899711 chr08:000899711 0 W/899711-899711 W466-5-1 Single Base Substitution G-C INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3630-S.SNP.8:902455 chr08:000902455 0 W/902455-902455 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.280263;DP=2890;DP4=1454,1289,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.129809;MQSB=0.00204881;RPB=0.287279;SGB=13.4442;VDB=0.687219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.8:922232 chr08:000922232 0 W/922232-922232 FN2179-S SNP A -> G AC=2;AN=168;BQB=0.208976;DP=4325;DP4=2203,2062,26,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.85332e-19;MQSB=0.981013;RPB=0.111989;SGB=-102.59;VDB=0.00334371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L111P|2711|LOC_Os08g02350|protein_coding|CODING|LOC_Os08g02350.1|3|1) FN-291.SNP.8:935873 chr08:000935873 0 W/935873-935873 FN-291 Single Base Substitution G-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2177-S.SNP.8:940896 chr08:000940896 0 W/940896-940896 FN2177-S SNP G -> T AC=1;AN=168;BQB=0.000149457;DP=3491;DP4=1591,1856,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00733629;MQSB=0.994952;RPB=0.91722;SGB=-255.325;VDB=0.920204;EFF=UTR_3_PRIME(MODIFIER||250||388|LOC_Os08g02370|protein_coding|CODING|LOC_Os08g02370.1|11|1) FN302-S.SNP.8:953485 chr08:000953485 0 W/953485-953485 FN302-S Single Base Substitution G-T INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2578-S.SNP.8:959246 chr08:000959246 0 W/959246-959246 FN2578-S SNP T -> G AC=1;AN=198;BQB=0.95547;DP=4106;DP4=2064,1832,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.69719e-05;MQSB=0.969236;RPB=0.999965;SGB=25.7687;VDB=0.439806;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.8:960494 chr08:000960494 0 W/960494-960494 FN276-S Single Base Substitution C-T INTERGENIC HOMO SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2235-S.SNP.8:960735 chr08:000960735 0 W/960735-960735 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.788529;DP=5158;DP4=2514,2101,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193874;MQB=1.47963e-15;MQSB=0.0103188;RPB=0.897433;SGB=59.414;VDB=0.562327;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.8:961167 chr08:000961167 0 W/961167-961167 FN526-S Single Base Substitution A-T INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN964-S.SNP.8:965083 chr08:000965083 0 W/965083-965083 FN964-S Single Base Substitution G-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3545-S.SNP.8:965209 chr08:000965209 0 W/965209-965209 FN3545-S SNP T -> A AC=1;AN=188;BQB=0.968044;DP=2922;DP4=1279,1555,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26282e-07;MQSB=0.710949;RPB=0.738642;SGB=44.4357;VDB=0.808623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.8:969161 chr08:000969161 0 W/969161-969161 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.894378;DP=2030;DP4=1130,829,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.38387e-05;MQSB=0.657838;RPB=0.908955;SGB=18.1394;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.8:969869 chr08:000969869 0 W/969869-969869 FN1335-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g02420 OsCML7 - Calmodulin-related calcium sensor protein, expressed SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN4241-S.SNP.8:984956 chr08:000984956 0 W/984956-984956 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.84297;DP=1839;DP4=812,962,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.78122e-05;MQSB=0.98433;RPB=0.560114;SGB=38.987;VDB=0.781995;EFF=INTRON(MODIFIER||||328|LOC_Os08g02460|protein_coding|CODING|LOC_Os08g02460.1|6|1) FN1380-S.SNP.8:989411 chr08:000989411 0 W/989411-989411 FN1380-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN911-S.SNP.8:994107 chr08:000994107 0 W/994107-994107 FN911-S Single Base Substitution C-T INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN788-S.SNP.8:1001007 chr08:001001007 0 W/1001007-1001007 FN788-S Single Base Substitution G-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2600-S.SNP.8:1001878 chr08:001001878 0 W/1001878-1001878 FN2600-S SNP G -> T AC=1;AN=198;BQB=0.778056;DP=3836;DP4=1759,1861,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000782065;MQB=1.78935e-06;MQSB=0.850576;RPB=0.995;SGB=36.5539;VDB=0.656653;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L759I|798|LOC_Os08g02480|protein_coding|CODING|LOC_Os08g02480.1|2|1) FN2282.SNP.8:1004210 chr08:001004210 0 W/1004210-1004210 FN2282 SNP G -> A AC=2;AN=192;BQB=0.834445;DP=5061;DP4=2168,2479,25,30;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0985971;MQB=1.84512e-05;MQSB=0;RPB=0.875278;SGB=185.918;VDB=0.326065;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L13|798|LOC_Os08g02480|protein_coding|CODING|LOC_Os08g02480.1|1|1) FN2486.SNP.8:1006650 chr08:001006650 0 W/1006650-1006650 FN2486 SNP G -> A AC=1;AN=200;BQB=0.858536;DP=4962;DP4=1906,2492,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000403063;MQB=2.26303e-11;MQSB=0.203909;RPB=0.992301;SGB=-38.0794;VDB=0.265959;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.8:1021855 chr08:001021855 0 W/1021855-1021855 FN2545-S SNP A -> C AC=1;AN=198;BQB=0.910339;DP=7323;DP4=3560,3338,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.000819336;MQB=0.186772;MQSB=0.0509704;RPB=0.957301;SGB=40.149;VDB=0.456741;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.8:1028331 chr08:001028331 0 W/1028331-1028331 W453-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN469-S.SNP.8:1031384 chr08:001031384 0 W/1031384-1031384 FN469-S Single Base Substitution A-C INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN1031-S.SNP.8:1031828 chr08:001031828 0 W/1031828-1031828 FN1031-S Single Base Substitution G-A INTERGENIC HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1529-S.SNP.8:1033578 chr08:001033578 0 W/1033578-1033578 FN1529-S Single Base Substitution A-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3569-S.SNP.8:1037257 chr08:001037257 0 W/1037257-1037257 FN3569-S SNP T -> C AC=1;AN=188;BQB=0.851796;DP=2924;DP4=1405,1345,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58113e-09;MQSB=0.828328;RPB=0.906798;SGB=58.0655;VDB=0.536579;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.8:1039274 chr08:001039274 0 W/1039274-1039274 FN-394 Single Base Substitution G-C INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN724-S.SNP.8:1048694 chr08:001048694 0 W/1048694-1048694 FN724-S Single Base Substitution T-A INTRON HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN4144-S.SNP.8:1049372 chr08:001049372 0 W/1049372-1049372 FN4144-S SNP C -> G AC=2;AN=170;BQB=0.959088;DP=2756;DP4=1236,1434,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.21804e-11;MQSB=0.976385;RPB=0.780464;SGB=72.7472;VDB=0.313477;EFF=INTRON(MODIFIER||||299|LOC_Os08g02540|protein_coding|CODING|LOC_Os08g02540.1|3|1) FN1610-S.SNP.8:1056674 chr08:001056674 0 W/1056674-1056674 FN1610-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os08g02560 DUF1517 domain containing protein, putative, expressed SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2265-S.SNP.8:1058668 chr08:001058668 0 W/1058668-1058668 FN2265-S SNP T -> C AC=2;AN=190;BQB=0.988652;DP=4949;DP4=2238,2295,23,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000202061;MQB=2.36395e-25;MQSB=0.955229;RPB=0.804967;SGB=164.04;VDB=0.244814;EFF=INTRON(MODIFIER||||403|LOC_Os08g02560|protein_coding|CODING|LOC_Os08g02560.1|2|1) FN1084-S.SNP.8:1059930 chr08:001059930 0 W/1059930-1059930 FN1084-S Single Base Substitution C-G INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1337-S.SNP.8:1060299 chr08:001060299 0 W/1060299-1060299 FN1337-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2116-S.SNP.8:1065214 chr08:001065214 0 W/1065214-1065214 FN2116-S SNP A -> C AC=1;AN=168;BQB=0.949411;DP=4192;DP4=2062,2093,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.82234e-16;MQSB=0.996064;RPB=0.449245;SGB=114.204;VDB=0.775808;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K284Q|392|LOC_Os08g02570|protein_coding|CODING|LOC_Os08g02570.1|5|1) FN2179-S.SNP.8:1076922 chr08:001076922 0 W/1076922-1076922 FN2179-S SNP C -> T AC=2;AN=168;BQB=0.0140123;DP=4317;DP4=2280,1983,28,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.85357e-19;MQSB=0.994206;RPB=0.953196;SGB=-305.859;VDB=0.884115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.8:1083476 chr08:001083476 0 W/1083476-1083476 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.389184;DP=4901;DP4=2087,2545,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.20731e-08;MQSB=0.907577;RPB=0.953559;SGB=16.4591;VDB=0.585871;EFF=INTERGENIC(MODIFIER||||||||||1) FN817-S.SNP.8:1105161 chr08:001105161 0 W/1105161-1105161 FN817-S Single Base Substitution T-C INTERGENIC HOMO SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3844-S.SNP.8:1121195 chr08:001121195 0 W/1121195-1121195 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.948216;DP=2604;DP4=1251,1278,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69079e-05;MQSB=0.999374;RPB=0.968751;SGB=25.439;VDB=0.729128;EFF=UTR_3_PRIME(MODIFIER||944||716|LOC_Os08g02690|protein_coding|CODING|LOC_Os08g02690.1|4|1) CW-631-3-1.SNP.8:1121312 chr08:001121312 0 W/1121312-1121312 CW-631-3-1 Single Base Substitution T-C UTR_3_PRIME HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2479.SNP.8:1127362 chr08:001127362 0 W/1127362-1127362 FN2479 SNP G -> C AC=1;AN=200;BQB=0.995226;DP=4836;DP4=2362,2258,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.40534e-14;MQSB=0.916521;RPB=0.933884;SGB=95.7111;VDB=0.61443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.8:1130149 chr08:001130149 0 W/1130149-1130149 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.952856;DP=4999;DP4=2443,2288,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020004;MQB=2.56455e-13;MQSB=0.974253;RPB=0.998161;SGB=109.527;VDB=0.7695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.8:1130399 chr08:001130399 0 W/1130399-1130399 FN3574-S SNP A -> G AC=1;AN=188;BQB=0.288619;DP=2844;DP4=1438,1336,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.9246e-11;MQSB=0.953817;RPB=0.983988;SGB=43.8792;VDB=0.885676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1462-S.SNP.8:1135130 chr08:001135130 0 W/1135130-1135130 FN1462-S Single Base Substitution G-A INTRON HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2488.SNP.8:1139200 chr08:001139200 0 W/1139200-1139200 FN2488 SNP C -> A AC=1;AN=200;BQB=0.645801;DP=4458;DP4=2103,2066,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000224316;MQB=5.55968e-12;MQSB=0.997033;RPB=0.00947105;SGB=58.2954;VDB=0.0298343;EFF=INTRON(MODIFIER||||165|LOC_Os08g02720|protein_coding|CODING|LOC_Os08g02720.1|2|1) FN777-S.SNP.8:1140981 chr08:001140981 0 W/1140981-1140981 FN777-S Single Base Substitution C-A INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN-359.SNP.8:1142020 chr08:001142020 0 W/1142020-1142020 FN-359 Single Base Substitution G-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN3751-S.SNP.8:1144383 chr08:001144383 0 W/1144383-1144383 FN3751-S SNP A -> G AC=2;AN=190;BQB=0.917417;DP=2642;DP4=1305,1227,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.25771e-19;MQSB=0.967647;RPB=0.591029;SGB=144.727;VDB=0.809487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.8:1147356 chr08:001147356 0 W/1147356-1147356 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.585103;DP=2802;DP4=1276,1447,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=3.10811e-06;MQSB=2.73922e-12;RPB=0.217257;SGB=39.2697;VDB=0.319185;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.8:1156011 chr08:001156011 0 W/1156011-1156011 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.998438;DP=2532;DP4=1095,1368,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.03083e-11;MQSB=0.999849;RPB=0.906538;SGB=78.9707;VDB=0.811271;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V295M|373|LOC_Os08g02750|protein_coding|CODING|LOC_Os08g02750.1|4|1) FN1430-S.SNP.8:1157425 chr08:001157425 0 W/1157425-1157425 FN1430-S Single Base Substitution A-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1273-S.SNP.8:1160456 chr08:001160456 0 W/1160456-1160456 FN1273-S Single Base Substitution A-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN2102-S.SNP.8:1172123 chr08:001172123 0 W/1172123-1172123 FN2102-S SNP A -> G AC=1;AN=168;BQB=0.505004;DP=2571;DP4=1304,1220,25,10;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0715675;MQB=4.37844e-05;MQSB=0.917131;RPB=0.00822776;SGB=-481.147;VDB=0.247212;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.8:1176394 chr08:001176394 0 W/1176394-1176394 FN4122-S SNP G -> A AC=1;AN=182;BQB=0.977762;DP=3300;DP4=1468,1779,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0493939;MQB=0.371508;MQSB=0.0126811;RPB=0.923954;SGB=48.6223;VDB=0.170559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A2V|1115|LOC_Os08g02790|protein_coding|CODING|LOC_Os08g02790.1|1|1) FN3756-S.SNP.8:1176539 chr08:001176539 0 W/1176539-1176539 FN3756-S SNP C -> G AC=1;AN=190;BQB=0.81575;DP=4005;DP4=1611,2240,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=18;MQ0F=0.435705;MQB=0.00513973;MQSB=0;RPB=0.284595;SGB=90.0802;VDB=0.792412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.8:1176555 chr08:001176555 0 W/1176555-1176555 FN2224-S SNP G -> A AC=1;AN=190;BQB=0.190919;DP=6050;DP4=3310,2262,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.306446;MQB=0.00935104;MQSB=0;RPB=0.963149;SGB=112.85;VDB=0.283057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.8:1177925 chr08:001177925 0 W/1177925-1177925 FN3721-S SNP T -> C AC=1;AN=190;BQB=0.476153;DP=3227;DP4=1516,1376,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.119306;MQB=0.810729;MQSB=1.00049e-06;RPB=0.919541;SGB=8.77275;VDB=0.794297;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.8:1180339 chr08:001180339 0 W/1180339-1180339 FN-161 Single Base Substitution T-C INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1554-S.SNP.8:1180561 chr08:001180561 0 W/1180561-1180561 FN1554-S Single Base Substitution G-C INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2498.SNP.8:1183354 chr08:001183354 0 W/1183354-1183354 FN2498 SNP C -> T AC=2;AN=200;BQB=0.173021;DP=4404;DP4=2070,2020,20,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.80017e-19;MQSB=0.904152;RPB=0.990722;SGB=126.794;VDB=0.354487;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G200R|406|LOC_Os08g02820|protein_coding|CODING|LOC_Os08g02820.1|2|1) FN2305.SNP.8:1184724 chr08:001184724 0 W/1184724-1184724 FN2305 SNP C -> T AC=1;AN=192;BQB=0.972581;DP=4987;DP4=2634,2004,15,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.68239e-12;MQSB=0.850374;RPB=0.817585;SGB=-91.06;VDB=0.539884;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.8:1185660 chr08:001185660 0 W/1185660-1185660 FN3534-S SNP C -> A AC=2;AN=188;BQB=0.990949;DP=3107;DP4=1362,1657,18,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.62752e-16;MQSB=0.914948;RPB=0.970926;SGB=130.758;VDB=0.284779;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.8:1190136 chr08:001190136 0 W/1190136-1190136 FN4173-S SNP G -> A AC=1;AN=170;BQB=0.964811;DP=2169;DP4=1122,972,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.74954e-05;MQSB=0.924479;RPB=0.966147;SGB=24.5502;VDB=0.38593;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.8:1191630 chr08:001191630 0 W/1191630-1191630 FN-162 Single Base Substitution A-G INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN892-S.SNP.8:1200016 chr08:001200016 0 W/1200016-1200016 FN892-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2791-S.SNP.8:1200490 chr08:001200490 0 W/1200490-1200490 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.705851;DP=3938;DP4=2069,1635,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.12066e-05;MQSB=0.970508;RPB=0.544174;SGB=54.144;VDB=0.320484;EFF=INTERGENIC(MODIFIER||||||||||1) FN-192.SNP.8:1203543 chr08:001203543 0 W/1203543-1203543 FN-192 Single Base Substitution G-A INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2721-S.SNP.8:1203692 chr08:001203692 0 W/1203692-1203692 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.9989;DP=5448;DP4=2618,2571,12,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=8.17393e-06;MQSB=0.180434;RPB=0.225291;SGB=61.9006;VDB=0.0268662;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.8:1204457 chr08:001204457 0 W/1204457-1204457 FN3444-S SNP A -> G AC=1;AN=184;BQB=0.746991;DP=2654;DP4=1200,1382,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00037679;MQB=3.94856e-10;MQSB=0.908355;RPB=0.648431;SGB=28.3187;VDB=0.711153;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.8:1206557 chr08:001206557 0 W/1206557-1206557 FN702-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g02860 transposon protein, putative, unclassified, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN-61.SNP.8:1225834 chr08:001225834 0 W/1225834-1225834 FN-61 Single Base Substitution A-G INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2175-S.SNP.8:1278639 chr08:001278639 0 W/1278639-1278639 FN2175-S SNP A -> C AC=1;AN=168;BQB=0.0686962;DP=4436;DP4=2151,2244,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.13118e-10;MQSB=0.992282;RPB=0.287846;SGB=-41.2125;VDB=0.194355;EFF=INTRON(MODIFIER||||105|LOC_Os08g02930|protein_coding|CODING|LOC_Os08g02930.1|4|1) FN3467-S.SNP.8:1293814 chr08:001293814 0 W/1293814-1293814 FN3467-S SNP C -> A AC=2;AN=184;BQB=0.663267;DP=2682;DP4=1467,1123,19,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=6.5388e-10;MQSB=0.999135;RPB=0.526185;SGB=63.6237;VDB=0.0465518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.8:1303218 chr08:001303218 0 W/1303218-1303218 FN1015-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g02990 retrotransposon protein, putative, unclassified, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1492-S.SNP.8:1303493 chr08:001303493 0 W/1303493-1303493 FN1492-S Single Base Substitution C-T INTRON Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN-141.SNP.8:1303623 chr08:001303623 0 W/1303623-1303623 FN-141 Single Base Substitution A-T INTRON HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN1096-S.SNP.8:1306430 chr08:001306430 0 W/1306430-1306430 FN1096-S Single Base Substitution T-A STOP_GAINED HET LOC_Os08g02990 retrotransposon protein, putative, unclassified, expressed SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3919-S.SNP.8:1313540 chr08:001313540 0 W/1313540-1313540 FN3919-S SNP G -> A AC=1;AN=158;BQB=0.778682;DP=2489;DP4=1220,1137,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.90941e-06;MQSB=0.97831;RPB=0.97975;SGB=44.1818;VDB=0.0299062;EFF=UTR_3_PRIME(MODIFIER||116||485|LOC_Os08g03002|protein_coding|CODING|LOC_Os08g03002.1|1|1) FN1392-S.SNP.8:1315703 chr08:001315703 0 W/1315703-1315703 FN1392-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1075-S.SNP.8:1318622 chr08:001318622 0 W/1318622-1318622 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3537-S.SNP.8:1333761 chr08:001333761 0 W/1333761-1333761 FN3537-S SNP C -> A AC=1;AN=188;BQB=0.780002;DP=5062;DP4=3104,1859,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0770446;MQB=0.821751;MQSB=6.24927e-05;RPB=0.0766104;SGB=94.4119;VDB=0.0616809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.8:1334234 chr08:001334234 0 W/1334234-1334234 FN3552-S SNP G -> A AC=1;AN=188;BQB=0.947101;DP=5089;DP4=1949,2977,19,14;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0516801;MQB=0.112418;MQSB=1.98725e-07;RPB=0.563168;SGB=144.388;VDB=0.463996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.8:1334444 chr08:001334444 0 W/1334444-1334444 FN3628-S SNP T -> G AC=1;AN=190;BQB=0.0916604;DP=2442;DP4=802,1348,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.101556;MQB=0.580589;MQSB=0.473688;RPB=0.824132;SGB=-103.97;VDB=0.133212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.8:1339993 chr08:001339993 0 W/1339993-1339993 FN2600-S SNP G -> A AC=1;AN=188;BQB=0.984091;DP=3941;DP4=1820,1915,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.89237e-13;MQSB=0.975159;RPB=0.506478;SGB=42.3199;VDB=0.505259;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.8:1341588 chr08:001341588 0 W/1341588-1341588 FN2354 SNP T -> G AC=1;AN=192;BQB=0.951347;DP=4719;DP4=2284,2144,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.48665e-09;MQSB=0.430985;RPB=0.667067;SGB=8.91915;VDB=0.672706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Cca|T513P|676|LOC_Os08g03020|protein_coding|CODING|LOC_Os08g03020.1|2|1) FN-218.SNP.8:1343838 chr08:001343838 0 W/1343838-1343838 FN-218 Single Base Substitution C-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN497-S.SNP.8:1343838 chr08:001343838 0 W/1343838-1343838 FN497-S Single Base Substitution C-T INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2471.SNP.8:1347053 chr08:001347053 0 W/1347053-1347053 FN2471 SNP G -> A AC=1;AN=200;BQB=0.872731;DP=4704;DP4=2029,2440,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.45478e-13;MQSB=0.988083;RPB=0.0786276;SGB=50.3263;VDB=0.10186;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.8:1347904 chr08:001347904 0 W/1347904-1347904 FN3862-S SNP G -> A AC=2;AN=158;BQB=0.956607;DP=2658;DP4=1049,1464,12,16;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0255831;MQB=0.806564;MQSB=3.58139e-10;RPB=0.71809;SGB=52.2521;VDB=0.045452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.8:1351271 chr08:001351271 0 W/1351271-1351271 FN1586-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g03030 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2140-S.SNP.8:1351271 chr08:001351271 0 W/1351271-1351271 FN2140-S SNP A -> T AC=1;AN=168;BQB=0.0173476;DP=3874;DP4=1867,1966,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0183273;MQB=0.49994;MQSB=4.06743e-05;RPB=0.998227;SGB=-80.6216;VDB=0.5891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N1342K|1535|LOC_Os08g03030|protein_coding|CODING|LOC_Os08g03030.1|5|1) FN3718-S.SNP.8:1351271 chr08:001351271 0 W/1351271-1351271 FN3718-S SNP A -> T AC=1;AN=190;BQB=0.937769;DP=2877;DP4=1426,1313,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0045186;MQB=0.012256;MQSB=0.878364;RPB=0.993185;SGB=26.3271;VDB=0.906411;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N1342K|1535|LOC_Os08g03030|protein_coding|CODING|LOC_Os08g03030.1|5|1) FN1440-S.SNP.8:1351532 chr08:001351532 0 W/1351532-1351532 FN1440-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN939-S.SNP.8:1351532 chr08:001351532 0 W/1351532-1351532 FN939-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN3679-S.SNP.8:1351904 chr08:001351904 0 W/1351904-1351904 FN3679-S SNP T -> C AC=1;AN=190;BQB=0.982989;DP=2904;DP4=1322,1456,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00137741;MQB=4.2396e-07;MQSB=0.482756;RPB=0.113;SGB=43.2083;VDB=0.0808118;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I1174M|1535|LOC_Os08g03030|protein_coding|CODING|LOC_Os08g03030.1|4|1) FN3729-S.SNP.8:1358311 chr08:001358311 0 W/1358311-1358311 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.258129;DP=2396;DP4=918,1365,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.043304;MQSB=0.000118772;RPB=0.867239;SGB=-17.0991;VDB=0.0366679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.8:1361376 chr08:001361376 0 W/1361376-1361376 FN1430-S Single Base Substitution G-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-292.SNP.8:1364226 chr08:001364226 0 W/1364226-1364226 FN-292 Single Base Substitution A-C INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN3306-S.SNP.8:1365283 chr08:001365283 0 W/1365283-1365283 FN3306-S SNP A -> G AC=1;AN=184;BQB=0.978892;DP=2947;DP4=1457,1375,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.1511e-05;MQSB=0.741377;RPB=0.999805;SGB=35.1773;VDB=0.190636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F147L|249|LOC_Os08g03040|protein_coding|CODING|LOC_Os08g03040.1|2|1) FN3799-S.SNP.8:1366398 chr08:001366398 0 W/1366398-1366398 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.781521;DP=2661;DP4=1496,1071,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.92498e-07;MQSB=0.999999;RPB=0.996049;SGB=32.5467;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.8:1366398 chr08:001366398 0 W/1366398-1366398 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.826289;DP=2435;DP4=1358,999,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.16285e-06;MQSB=0.987902;RPB=0.4501;SGB=34.0735;VDB=0.775292;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.8:1367849 chr08:001367849 0 W/1367849-1367849 FN970-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g03050 hypothetical protein SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN846-S.SNP.8:1368032 chr08:001368032 0 W/1368032-1368032 FN846-S Single Base Substitution A-G INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN-136.SNP.8:1374240 chr08:001374240 0 W/1374240-1374240 FN-136 Single Base Substitution C-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2619-S.SNP.8:1376943 chr08:001376943 0 W/1376943-1376943 FN2619-S SNP C -> A AC=1;AN=186;BQB=0.764209;DP=3906;DP4=1659,2008,21,18;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.11038e-23;MQSB=0.779441;RPB=0.893427;SGB=42.8469;VDB=0.930575;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.8:1379615 chr08:001379615 0 W/1379615-1379615 FN470-S Single Base Substitution G-A INTRON HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN470-S.SNP.8:1379941 chr08:001379941 0 W/1379941-1379941 FN470-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g03080 retrotransposon protein, putative, unclassified, expressed SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN4145-S.SNP.8:1384324 chr08:001384324 0 W/1384324-1384324 FN4145-S SNP C -> T AC=2;AN=170;BQB=0.99632;DP=2353;DP4=1072,1210,8,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.80431e-10;MQSB=0.999968;RPB=0.995123;SGB=74.528;VDB=0.803346;EFF=INTRON(MODIFIER||||901|LOC_Os08g03080|protein_coding|CODING|LOC_Os08g03080.1|11|1) FN3764-S.SNP.8:1384915 chr08:001384915 0 W/1384915-1384915 FN3764-S SNP C -> G AC=2;AN=190;BQB=0.871383;DP=2583;DP4=1180,1319,12,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.87459e-13;MQSB=0.936619;RPB=0.219318;SGB=85.5263;VDB=0.382592;EFF=INTRON(MODIFIER||||901|LOC_Os08g03080|protein_coding|CODING|LOC_Os08g03080.1|11|1) FN2437.SNP.8:1385147 chr08:001385147 0 W/1385147-1385147 FN2437 SNP C -> G AC=2;AN=200;BQB=0.218788;DP=4948;DP4=2477,2130,36,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.53598e-34;MQSB=0.959298;RPB=0.974816;SGB=189.274;VDB=0.941953;EFF=INTRON(MODIFIER||||901|LOC_Os08g03080|protein_coding|CODING|LOC_Os08g03080.1|11|1) FN3370-S.SNP.8:1389143 chr08:001389143 0 W/1389143-1389143 FN3370-S SNP G -> A AC=2;AN=184;BQB=0.999994;DP=2928;DP4=1507,1300,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.06315e-16;MQSB=0.913694;RPB=0.997221;SGB=102.662;VDB=0.750394;EFF=INTERGENIC(MODIFIER||||||||||1) FN2257-S.SNP.8:1390380 chr08:001390380 0 W/1390380-1390380 FN2257-S SNP G -> A AC=2;AN=190;BQB=0.899098;DP=5335;DP4=2579,2336,21,30;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=4.50316e-15;MQSB=0.00123703;RPB=0.494552;SGB=60.0507;VDB=0.954483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.8:1396769 chr08:001396769 0 W/1396769-1396769 FN1658-S SNP G -> T AC=2;AN=188;BQB=0.97561;DP=3631;DP4=2029,1551,21,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.46479e-20;MQSB=0.992258;RPB=0.343735;SGB=34.8608;VDB=0.313998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.8:1399006 chr08:001399006 0 W/1399006-1399006 FN2687-S SNP A -> T AC=1;AN=200;BQB=0.0778598;DP=5039;DP4=2621,2291,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.92401e-06;MQSB=0.0975547;RPB=0.837306;SGB=45.0543;VDB=0.740319;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.8:1399065 chr08:001399065 0 W/1399065-1399065 FN952-S Single Base Substitution T-C INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN846-S.SNP.8:1401781 chr08:001401781 0 W/1401781-1401781 FN846-S Single Base Substitution A-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN426-S.SNP.8:1404066 chr08:001404066 0 W/1404066-1404066 FN426-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN-188.SNP.8:1407807 chr08:001407807 0 W/1407807-1407807 FN-188 Single Base Substitution T-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2599-S.SNP.8:1411741 chr08:001411741 0 W/1411741-1411741 FN2599-S SNP C -> A AC=1;AN=198;BQB=0.976352;DP=4196;DP4=2008,1939,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=20;MQ0F=0.409676;MQB=0.296886;MQSB=0;RPB=0.964884;SGB=14.1348;VDB=0.298946;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.8:1413006 chr08:001413006 0 W/1413006-1413006 FN4096-S SNP T -> A AC=2;AN=182;BQB=0.982515;DP=3424;DP4=1548,1777,13,13;HOB=0.0217365;ICB=0.494567;MQ=27;MQ0F=0.297313;MQB=0.559916;MQSB=0;RPB=0.233589;SGB=50.7635;VDB=0.772985;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.8:1413007 chr08:001413007 0 W/1413007-1413007 FN4096-S SNP G -> T AC=2;AN=182;BQB=0.961532;DP=3401;DP4=1542,1782,12,10;HOB=0.0217365;ICB=0.494567;MQ=27;MQ0F=0.299618;MQB=0.457875;MQSB=0;RPB=0.204825;SGB=93.7308;VDB=0.849156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.8:1420916 chr08:001420916 0 W/1420916-1420916 FN1079-S Single Base Substitution T-G INTRON HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN541-S.SNP.8:1424826 chr08:001424826 0 W/1424826-1424826 FN541-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g03120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2705-S.SNP.8:1432367 chr08:001432367 0 W/1432367-1432367 FN2705-S SNP G -> A AC=1;AN=200;BQB=7.15313e-11;DP=5228;DP4=2238,2401,181,61;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.057192;MQB=0;MQSB=0.996496;RPB=0;SGB=-3353.21;VDB=0;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A166|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|2|1) FN3297-S.SNP.8:1432367 chr08:001432367 0 W/1432367-1432367 FN3297-S SNP G -> A AC=2;AN=184;BQB=0.755072;DP=3940;DP4=2084,1584,85,56;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0961929;MQB=8.77037e-33;MQSB=8.07428e-41;RPB=5.39051e-33;SGB=-2403.76;VDB=4.8175e-18;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A166|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|2|1) FN3325-S.SNP.8:1432672 chr08:001432672 0 W/1432672-1432672 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.836843;DP=4706;DP4=2691,1915,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.18827;MQB=0.344043;MQSB=0.168582;RPB=0.998868;SGB=48.7425;VDB=0.94573;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G268E|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|2|1) FN-101.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN-101 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1061-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN1061-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1382-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN1382-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1439-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN1439-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2171-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.609414;DP=2023;DP4=921,1052,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0840336;MQB=0.34532;MQSB=0.00579634;RPB=0.902588;SGB=-35.5206;VDB=0.593035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R322C|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|4|1) FN3506-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN3506-S SNP C -> T AC=2;AN=188;BQB=0.987749;DP=3199;DP4=1825,1305,13,10;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.027196;MQB=0.00615687;MQSB=0.0138389;RPB=0.959202;SGB=71.4172;VDB=0.231142;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R322C|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|4|1) FN662-S.SNP.8:1433231 chr08:001433231 0 W/1433231-1433231 FN662-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN3999-S.SNP.8:1433451 chr08:001433451 0 W/1433451-1433451 FN3999-S SNP C -> A AC=2;AN=168;BQB=0.959056;DP=3251;DP4=1493,1640,13,10;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.0301446;MQB=0.312539;MQSB=4.25011e-07;RPB=0.858786;SGB=96.481;VDB=0.172519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A395D|1708|LOC_Os08g03130|protein_coding|CODING|LOC_Os08g03130.1|4|1) FN428-S.SNP.8:1433899 chr08:001433899 0 W/1433899-1433899 FN428-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN731-S.SNP.8:1448792 chr08:001448792 0 W/1448792-1448792 FN731-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g03150 receptor like protein kinase, putative, expressed SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. 707-7.SNP.8:1450506 chr08:001450506 0 W/1450506-1450506 707-7 Single Base Substitution A-T INTERGENIC Homo SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN2289.SNP.8:1453727 chr08:001453727 0 W/1453727-1453727 FN2289 SNP C -> T AC=1;AN=192;BQB=0.0808748;DP=4593;DP4=1982,2362,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.84214e-11;MQSB=0.9046;RPB=0.545625;SGB=15.1765;VDB=0.0360189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.8:1460843 chr08:001460843 0 W/1460843-1460843 FN2539-S SNP T -> C AC=1;AN=198;BQB=0.433925;DP=4050;DP4=1849,1872,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.7668e-06;MQSB=0.772517;RPB=0.721441;SGB=-11.4553;VDB=0.22783;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.8:1460882 chr08:001460882 0 W/1460882-1460882 FN513-S Single Base Substitution C-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1113-S.SNP.8:1464617 chr08:001464617 0 W/1464617-1464617 FN1113-S Single Base Substitution C-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1652-S.SNP.8:1466079 chr08:001466079 0 W/1466079-1466079 FN1652-S Single Base Substitution T-A INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN825-S.SNP.8:1471096 chr08:001471096 0 W/1471096-1471096 FN825-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03180 retrotransposon protein, putative, unclassified, expressed SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN555-S.SNP.8:1486139 chr08:001486139 0 W/1486139-1486139 FN555-S Single Base Substitution C-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3855-S.SNP.8:1488485 chr08:001488485 0 W/1488485-1488485 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.976993;DP=2650;DP4=1257,1293,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=2.2788e-05;MQSB=0.214546;RPB=0.990254;SGB=42.6978;VDB=0.966146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.8:1488490 chr08:001488490 0 W/1488490-1488490 FN2267-S SNP C -> T AC=2;AN=190;BQB=0.995342;DP=5004;DP4=2418,2233,22,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.29779e-13;MQSB=0.908418;RPB=0.90917;SGB=77.2911;VDB=0.204688;EFF=INTERGENIC(MODIFIER||||||||||1) FN-74.SNP.8:1515578 chr08:001515578 0 W/1515578-1515578 FN-74 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g03270 zinc finger family protein, putative, expressed SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1496-S.SNP.8:1518433 chr08:001518433 0 W/1518433-1518433 FN1496-S Single Base Substitution C-A INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN3846-S.SNP.8:1520084 chr08:001520084 0 W/1520084-1520084 FN3846-S SNP T -> A AC=1;AN=190;BQB=0.968668;DP=3045;DP4=1483,1442,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65333e-07;MQSB=0.937905;RPB=0.947914;SGB=25.439;VDB=0.125735;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.8:1522943 chr08:001522943 0 W/1522943-1522943 FN729-S Single Base Substitution A-G INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN3559-S.SNP.8:1524068 chr08:001524068 0 W/1524068-1524068 FN3559-S SNP C -> T AC=2;AN=188;BQB=0.904874;DP=2745;DP4=1379,1269,12,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.39427e-21;MQSB=0.815026;RPB=0.802173;SGB=158.018;VDB=0.474971;EFF=INTERGENIC(MODIFIER||||||||||1) FN987-S.SNP.8:1524818 chr08:001524818 0 W/1524818-1524818 FN987-S Single Base Substitution A-G INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN990-S.SNP.8:1526940 chr08:001526940 0 W/1526940-1526940 FN990-S Single Base Substitution T-A INTRON HOMO SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN3424-S.SNP.8:1530475 chr08:001530475 0 W/1530475-1530475 FN3424-S SNP T -> A AC=1;AN=184;BQB=0.970632;DP=2871;DP4=1329,1392,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.86921e-10;MQSB=0.974463;RPB=0.678306;SGB=11.3677;VDB=0.0257282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.8:1535763 chr08:001535763 0 W/1535763-1535763 FN3343-S SNP C -> G AC=1;AN=184;BQB=0.763368;DP=3092;DP4=1481,1478,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.40271e-07;MQSB=2.87003e-08;RPB=0.289082;SGB=49.835;VDB=0.270624;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN-113 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03330 expressed protein SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN1373-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN1373-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g03330 expressed protein SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1396-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN1396-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03330 expressed protein SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1618-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN1618-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g03330 expressed protein SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2253-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN2253-S SNP C -> T AC=2;AN=190;BQB=0.0220501;DP=3623;DP4=1569,1803,10,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.000513074;MQSB=0.0012407;RPB=0.913144;SGB=67.3108;VDB=0.787351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V347M|411|LOC_Os08g03330|protein_coding|CODING|LOC_Os08g03330.1|1|1) FN2751-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.974711;DP=4249;DP4=2043,1968,3,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58195e-10;MQSB=0.907471;RPB=0.936077;SGB=47.4799;VDB=0.788664;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V347M|411|LOC_Os08g03330|protein_coding|CODING|LOC_Os08g03330.1|1|1) FN3807-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN3807-S SNP C -> T AC=2;AN=190;BQB=0.995628;DP=2439;DP4=1239,1117,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.16445e-14;MQSB=0.99945;RPB=0.999452;SGB=112.85;VDB=0.894679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V347M|411|LOC_Os08g03330|protein_coding|CODING|LOC_Os08g03330.1|1|1) FN3852-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.732016;DP=2217;DP4=1086,1034,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.88985e-13;MQSB=0.451782;RPB=0.726758;SGB=108.239;VDB=0.725444;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V347M|411|LOC_Os08g03330|protein_coding|CODING|LOC_Os08g03330.1|1|1) FN391-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN391-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g03330 expressed protein SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4271-S.SNP.8:1544448 chr08:001544448 0 W/1544448-1544448 FN4271-S SNP C -> T AC=2;AN=170;BQB=0.877156;DP=2232;DP4=1099,1061,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.81541e-14;MQSB=0.995042;RPB=0.963618;SGB=49.1957;VDB=0.875626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V347M|411|LOC_Os08g03330|protein_coding|CODING|LOC_Os08g03330.1|1|1) FN-184.SNP.8:1544902 chr08:001544902 0 W/1544902-1544902 FN-184 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g03330 expressed protein SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1727-S.SNP.8:1554118 chr08:001554118 0 W/1554118-1554118 FN1727-S SNP C -> T AC=1;AN=188;BQB=0.136719;DP=3354;DP4=2349,969,17,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28972e-12;MQSB=0.852876;RPB=0.854927;SGB=-111.008;VDB=0.671956;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.8:1574854 chr08:001574854 0 W/1574854-1574854 FN1436-S Single Base Substitution A-G INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2292.SNP.8:1585626 chr08:001585626 0 W/1585626-1585626 FN2292 SNP G -> C AC=1;AN=192;BQB=0.266753;DP=4675;DP4=2295,2104,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.55287e-18;MQSB=0.615021;RPB=0.816717;SGB=64.8148;VDB=0.311401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R24T|536|LOC_Os08g03390|protein_coding|CODING|LOC_Os08g03390.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R24T|473|LOC_Os08g03390|protein_coding|CODING|LOC_Os08g03390.2|2|1) FN2205-S.SNP.8:1586783 chr08:001586783 0 W/1586783-1586783 FN2205-S SNP T -> A AC=2;AN=190;BQB=0.941025;DP=4983;DP4=2410,2229,27,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.14652e-28;MQSB=0.844458;RPB=0.685565;SGB=5.60984;VDB=0.569885;EFF=INTRON(MODIFIER||||536|LOC_Os08g03390|protein_coding|CODING|LOC_Os08g03390.1|4|1),INTRON(MODIFIER||||473|LOC_Os08g03390|protein_coding|CODING|LOC_Os08g03390.2|4|1) FN3974-S.SNP.8:1591198 chr08:001591198 0 W/1591198-1591198 FN3974-S SNP A -> C AC=1;AN=168;BQB=0.466695;DP=2839;DP4=1469,1220,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00212e-07;MQSB=0.999354;RPB=0.997438;SGB=27.0464;VDB=0.80113;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.8:1596374 chr08:001596374 0 W/1596374-1596374 FN633-S Single Base Substitution T-C INTERGENIC HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN2646-S.SNP.8:1602321 chr08:001602321 0 W/1602321-1602321 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.476957;DP=4836;DP4=2283,2225,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.2812e-10;MQSB=0.97628;RPB=0.883247;SGB=51.0851;VDB=0.988031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S280L|413|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S277L|410|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S277L|410|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S228L|361|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.4|4|1) FN2088-S.SNP.8:1602324 chr08:001602324 0 W/1602324-1602324 FN2088-S SNP C -> A AC=2;AN=168;BQB=0.420045;DP=3812;DP4=2036,1698,23,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.22301e-15;MQSB=0.777641;RPB=0.812007;SGB=-7.61782;VDB=0.579063;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P281Q|413|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P278Q|410|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P278Q|410|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P229Q|361|LOC_Os08g03420|protein_coding|CODING|LOC_Os08g03420.4|4|1) FN1255-S.SNP.8:1618445 chr08:001618445 0 W/1618445-1618445 FN1255-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN1517-S.SNP.8:1618445 chr08:001618445 0 W/1618445-1618445 FN1517-S Single Base Substitution A-T INTERGENIC Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2415.SNP.8:1618445 chr08:001618445 0 W/1618445-1618445 FN2415 SNP A -> T AC=2;AN=200;BQB=0.95454;DP=4388;DP4=2297,1821,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.72205e-24;MQSB=0.93758;RPB=0.986205;SGB=148.425;VDB=0.857551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.8:1620755 chr08:001620755 0 W/1620755-1620755 FN3955-S SNP G -> A AC=2;AN=168;BQB=0.921646;DP=2716;DP4=1263,1343,10,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.934e-16;MQSB=0.868035;RPB=0.31899;SGB=86.2102;VDB=0.261526;EFF=INTRON(MODIFIER||||94|LOC_Os08g03450|protein_coding|CODING|LOC_Os08g03450.1|2|1) FN889-S.SNP.8:1634938 chr08:001634938 0 W/1634938-1634938 FN889-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g03490 ATBPM1, putative, expressed SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2211-S.SNP.8:1638068 chr08:001638068 0 W/1638068-1638068 FN2211-S SNP T -> C AC=1;AN=190;BQB=0.0879436;DP=4302;DP4=1721,2093,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.28302e-08;MQSB=0.998455;RPB=0.0618844;SGB=-13.222;VDB=0.016364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.8:1638759 chr08:001638759 0 W/1638759-1638759 FN2627-S SNP T -> C AC=1;AN=200;BQB=0.838144;DP=4850;DP4=2569,2078,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000206186;MQB=1.03029e-11;MQSB=0.996146;RPB=0.966601;SGB=9.48993;VDB=0.870222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.8:1639126 chr08:001639126 0 W/1639126-1639126 FN2333 SNP G -> T AC=1;AN=192;BQB=0.312785;DP=4757;DP4=2252,2211,13,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.65258e-18;MQSB=0.481392;RPB=0.999477;SGB=27.6913;VDB=0.370351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.8:1654944 chr08:001654944 0 W/1654944-1654944 FN2465 SNP G -> A AC=1;AN=200;BQB=0.830606;DP=4653;DP4=2146,2227,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17053e-11;MQSB=0.996243;RPB=0.785549;SGB=109.527;VDB=0.629265;EFF=INTRON(MODIFIER||||798|LOC_Os08g03560|protein_coding|CODING|LOC_Os08g03560.1|4|1),INTRON(MODIFIER||||798|LOC_Os08g03560|protein_coding|CODING|LOC_Os08g03560.2|4|1) FN1402-S.SNP.8:1664773 chr08:001664773 0 W/1664773-1664773 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN-221.SNP.8:1665474 chr08:001665474 0 W/1665474-1665474 FN-221 Single Base Substitution G-A INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3358-S.SNP.8:1666160 chr08:001666160 0 W/1666160-1666160 FN3358-S SNP C -> A AC=1;AN=184;BQB=0.987008;DP=2832;DP4=1433,1258,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.6274e-08;MQSB=0.700453;RPB=0.822914;SGB=23.2751;VDB=0.337982;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.8:1666875 chr08:001666875 0 W/1666875-1666875 FN523-S Single Base Substitution C-A INTERGENIC HOMO SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.8:1666875 chr08:001666875 0 W/1666875-1666875 FN532-S Single Base Substitution C-A INTERGENIC HOMO SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3801-S.SNP.8:1672114 chr08:001672114 0 W/1672114-1672114 FN3801-S SNP T -> C AC=1;AN=190;BQB=0.992526;DP=2388;DP4=1184,1091,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56965e-05;MQSB=0.860465;RPB=0.96057;SGB=25.439;VDB=0.800627;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.8:1673060 chr08:001673060 0 W/1673060-1673060 FN_777-2-1 Single Base Substitution A-G HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN540-S.SNP.8:1675233 chr08:001675233 0 W/1675233-1675233 FN540-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN3933-S.SNP.8:1683226 chr08:001683226 0 W/1683226-1683226 FN3933-S SNP G -> A AC=1;AN=158;BQB=0.532201;DP=2473;DP4=970,1301,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08162e-05;MQSB=0.220767;RPB=0.950756;SGB=34.0735;VDB=0.626644;EFF=INTRON(MODIFIER||||467|LOC_Os08g03600|protein_coding|CODING|LOC_Os08g03600.1|1|1) FN1527-S.SNP.8:1687667 chr08:001687667 0 W/1687667-1687667 FN1527-S Single Base Substitution A-T INTRON HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3562-S.SNP.8:1692514 chr08:001692514 0 W/1692514-1692514 FN3562-S SNP A -> T AC=1;AN=188;BQB=0.989814;DP=2741;DP4=1332,1345,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.70317e-08;MQSB=0.984288;RPB=0.530524;SGB=48.979;VDB=0.178357;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.8:1703350 chr08:001703350 0 W/1703350-1703350 FN-227 Single Base Substitution A-G INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN892-S.SNP.8:1703868 chr08:001703868 0 W/1703868-1703868 FN892-S Single Base Substitution T-C INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3323-S.SNP.8:1704427 chr08:001704427 0 W/1704427-1704427 FN3323-S SNP T -> A AC=1;AN=184;BQB=0.917803;DP=2781;DP4=1299,1384,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66521e-05;MQSB=0.75909;RPB=0.614006;SGB=10.6662;VDB=0.0453183;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.8:1711758 chr08:001711758 0 W/1711758-1711758 FN452-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g03620 tetratricopeptide repeat domain containing protein, expressed SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN846-S.SNP.8:1719664 chr08:001719664 0 W/1719664-1719664 FN846-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g03630 acyl-activating enzyme 14, putative, expressed SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN973-S.SNP.8:1722442 chr08:001722442 0 W/1722442-1722442 FN973-S Single Base Substitution T-G INTRON HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN596-S.SNP.8:1725326 chr08:001725326 0 W/1725326-1725326 FN596-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2399.SNP.8:1726901 chr08:001726901 0 W/1726901-1726901 FN2399 SNP C -> T AC=1;AN=200;BQB=0.785033;DP=5045;DP4=2363,2437,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.87555e-06;MQSB=0.971836;RPB=0.917557;SGB=1.46408;VDB=0.162805;EFF=SPLICE_SITE_DONOR(HIGH||||641|LOC_Os08g03650|protein_coding|CODING|LOC_Os08g03650.1|2|1),INTRON(MODIFIER||||641|LOC_Os08g03650|protein_coding|CODING|LOC_Os08g03650.1|2|1);LOF=(LOC_Os08g03650|LOC_Os08g03650|1|1.00) FN3854-S.SNP.8:1733165 chr08:001733165 0 W/1733165-1733165 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.970753;DP=2522;DP4=1131,1258,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.59052e-10;MQSB=0.293051;RPB=0.889332;SGB=30.927;VDB=0.84247;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.8:1738595 chr08:001738595 0 W/1738595-1738595 FN3525-S SNP T -> C AC=1;AN=188;BQB=0.925265;DP=3375;DP4=1847,1405,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0082963;MQB=0.503244;MQSB=0.000902576;RPB=0.780381;SGB=30.8063;VDB=0.85857;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F1055S|1523|LOC_Os08g03660|protein_coding|CODING|LOC_Os08g03660.1|6|1) FN3650-S.SNP.8:1749639 chr08:001749639 0 W/1749639-1749639 FN3650-S SNP C -> A AC=2;AN=190;BQB=0.795476;DP=2712;DP4=1029,1546,11,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.80667e-20;MQSB=0.528713;RPB=0.987762;SGB=175.678;VDB=0.282123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.8:1760601 chr08:001760601 0 W/1760601-1760601 FN3323-S SNP G -> C AC=1;AN=184;BQB=0.915379;DP=3638;DP4=1677,1855,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.24283e-08;MQSB=0.971717;RPB=0.112283;SGB=48.7425;VDB=0.00055817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.8:1763315 chr08:001763315 0 W/1763315-1763315 FN3466-S SNP G -> C AC=1;AN=184;BQB=0.769381;DP=2791;DP4=1471,1226,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.45459e-11;MQSB=0.999565;RPB=0.106197;SGB=89.4385;VDB=0.55652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.8:1765049 chr08:001765049 0 W/1765049-1765049 FN4021-S SNP C -> A AC=1;AN=168;BQB=0.426621;DP=2834;DP4=1275,1446,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.81345e-07;MQSB=0.939876;RPB=0.828097;SGB=74.3269;VDB=0.190757;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.8:1771439 chr08:001771439 0 W/1771439-1771439 FN445-S Single Base Substitution A-C INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1602-S.SNP.8:1785015 chr08:001785015 0 W/1785015-1785015 FN1602-S Single Base Substitution C-T INTRON HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN-145.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN-145 Single Base Substitution G-T INTERGENIC HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-402.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN-402 Single Base Substitution G-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1333-S.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN1333-S Single Base Substitution G-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1736-S.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN1736-S SNP G -> T AC=1;AN=188;BQB=0.982217;DP=2218;DP4=1128,1054,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.91588e-08;MQSB=0.981486;RPB=0.927657;SGB=20.9896;VDB=0.0891378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN2296 SNP G -> T AC=2;AN=192;BQB=0.99998;DP=4507;DP4=2181,2028,14,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.09063e-19;MQSB=0.991481;RPB=0.99432;SGB=75.0722;VDB=0.970206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN2547-S SNP G -> T AC=2;AN=198;BQB=0.586703;DP=3839;DP4=1906,1742,10,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.73908e-08;MQSB=0.976643;RPB=0.999769;SGB=-10.8602;VDB=0.107622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN3474-S SNP G -> T AC=1;AN=184;BQB=0.652742;DP=2896;DP4=1460,1353,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03322e-09;MQSB=0.99784;RPB=0.525081;SGB=33.3622;VDB=0.349049;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.8:1791463 chr08:001791463 0 W/1791463-1791463 FN685-S Single Base Substitution G-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-63.SNP.8:1795479 chr08:001795479 0 W/1795479-1795479 FN-63 Single Base Substitution C-T INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1349-S.SNP.8:1795707 chr08:001795707 0 W/1795707-1795707 FN1349-S Single Base Substitution G-A INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-298.SNP.8:1797417 chr08:001797417 0 W/1797417-1797417 FN-298 Single Base Substitution T-G INTRON HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1022-S.SNP.8:1798990 chr08:001798990 0 W/1798990-1798990 FN1022-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2479.SNP.8:1801665 chr08:001801665 0 W/1801665-1801665 FN2479 SNP T -> C AC=1;AN=200;BQB=0.802539;DP=5191;DP4=2240,2541,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.70438e-14;MQSB=0.997427;RPB=0.277984;SGB=22.3313;VDB=0.428518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.8:1806451 chr08:001806451 0 W/1806451-1806451 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.745357;DP=5081;DP4=2422,2404,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20103e-15;MQSB=0.528597;RPB=0.880545;SGB=55.5366;VDB=0.458155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.8:1807064 chr08:001807064 0 W/1807064-1807064 FN2639-S SNP G -> A AC=2;AN=200;BQB=0.789145;DP=4767;DP4=2134,2360,33,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.19893e-40;MQSB=0.973186;RPB=0.165833;SGB=298.339;VDB=0.458773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.8:1807065 chr08:001807065 0 W/1807065-1807065 FN2639-S SNP T -> A AC=2;AN=200;BQB=0.793184;DP=4771;DP4=2169,2354,34,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.28302e-39;MQSB=0.982323;RPB=0.158273;SGB=224.133;VDB=0.329252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.8:1812235 chr08:001812235 0 W/1812235-1812235 FN2397 SNP A -> T AC=1;AN=200;BQB=0.297558;DP=4723;DP4=2054,2467,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.53184e-18;MQSB=0.983961;RPB=0.612117;SGB=101.557;VDB=0.0881464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.8:1812306 chr08:001812306 0 W/1812306-1812306 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.471934;DP=5063;DP4=2517,2313,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.00902e-15;MQSB=0.998667;RPB=0.864494;SGB=17.5158;VDB=0.694395;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN-114 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN-3.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN-3 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 3, Mutant_ID: FN-3, Generation: M2, Mutations: 22, Genes: 29, Seed availability: Yes. FN1288-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN1288-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1442-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN1442-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1670-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN1670-S SNP G -> A AC=2;AN=188;BQB=0.13888;DP=2555;DP4=724,1799,6,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000391389;MQB=1.11532e-08;MQSB=0.00144519;RPB=0.99934;SGB=-11.1967;VDB=0.77633;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L57|142|LOC_Os08g03800|protein_coding|CODING|LOC_Os08g03800.1|1|1) FN3343-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN3343-S SNP G -> A AC=2;AN=184;BQB=0.611972;DP=3048;DP4=1740,1220,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000328084;MQB=9.83402e-10;MQSB=0.316778;RPB=0.998074;SGB=74.4875;VDB=0.255622;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L57|142|LOC_Os08g03800|protein_coding|CODING|LOC_Os08g03800.1|1|1) FN3862-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN3862-S SNP G -> A AC=2;AN=158;BQB=0.9329;DP=2377;DP4=1178,1105,14,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000420698;MQB=9.96713e-14;MQSB=0.188061;RPB=0.738766;SGB=91.3541;VDB=0.916971;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L57|142|LOC_Os08g03800|protein_coding|CODING|LOC_Os08g03800.1|1|1) FN3997-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.585805;DP=2316;DP4=1034,1198,14,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000431779;MQB=1.42438e-11;MQSB=0.0453391;RPB=0.899269;SGB=127.497;VDB=0.32598;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L57|142|LOC_Os08g03800|protein_coding|CODING|LOC_Os08g03800.1|1|1) FN442-S.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN442-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN_N1-213-1.SNP.8:1816990 chr08:001816990 0 W/1816990-1816990 FN_N1-213-1 Single Base Substitution G-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3828-S.SNP.8:1817313 chr08:001817313 0 W/1817313-1817313 FN3828-S SNP G -> T AC=2;AN=190;BQB=0.931299;DP=3077;DP4=1093,1872,7,23;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00942476;MQB=6.76337e-06;MQSB=0.995236;RPB=0.753745;SGB=27.4193;VDB=0.382448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.8:1832650 chr08:001832650 0 W/1832650-1832650 FN2246-S SNP G -> A AC=2;AN=190;BQB=0.998124;DP=4378;DP4=2547,1509,27,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.0321e-18;MQSB=0.778969;RPB=0.568468;SGB=121.394;VDB=0.0393567;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.8:1834180 chr08:001834180 0 W/1834180-1834180 FN1056-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN902-S.SNP.8:1846371 chr08:001846371 0 W/1846371-1846371 FN902-S Single Base Substitution G-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN881-S.SNP.8:1865395 chr08:001865395 0 W/1865395-1865395 FN881-S Single Base Substitution A-C INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN897-S.SNP.8:1867446 chr08:001867446 0 W/1867446-1867446 FN897-S Single Base Substitution C-A INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN1093-S.SNP.8:1872709 chr08:001872709 0 W/1872709-1872709 FN1093-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g03930 retrotransposon protein, putative, unclassified, expressed SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. 702-4.SNP.8:1876526 chr08:001876526 0 W/1876526-1876526 702-4 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1445, Mutant_ID: 702-4, Generation: M2, Mutations: 27, Genes: 28, Seed availability: Yes. FN999-S.SNP.8:1876794 chr08:001876794 0 W/1876794-1876794 FN999-S Single Base Substitution G-A INTRON HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2538-S.SNP.8:1876964 chr08:001876964 0 W/1876964-1876964 FN2538-S SNP C -> A AC=1;AN=198;BQB=0.664505;DP=3810;DP4=1846,1772,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.86837e-08;MQSB=0.086178;RPB=0.727377;SGB=58.7391;VDB=0.525752;EFF=SPLICE_SITE_REGION(LOW||||468|LOC_Os08g03940|protein_coding|CODING|LOC_Os08g03940.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R68|468|LOC_Os08g03940|protein_coding|CODING|LOC_Os08g03940.1|2|1) FN3434-S.SNP.8:1883829 chr08:001883829 0 W/1883829-1883829 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.999224;DP=3669;DP4=1423,2109,9,49;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.020169;MQB=3.26541e-21;MQSB=0.000195058;RPB=1.05883e-10;SGB=-1493.71;VDB=0.33999;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A182|215|LOC_Os08g03950|protein_coding|CODING|LOC_Os08g03950.1|1|1) FN3058-S.SNP.8:1889224 chr08:001889224 0 W/1889224-1889224 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.794802;DP=3607;DP4=1656,1842,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0191295;MQB=0.388649;MQSB=0.177612;RPB=0.141135;SGB=93.9603;VDB=0.424583;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A679|781|LOC_Os08g03960|protein_coding|CODING|LOC_Os08g03960.1|2|1) FN2657-S.SNP.8:1896523 chr08:001896523 0 W/1896523-1896523 FN2657-S SNP G -> T AC=1;AN=200;BQB=0.924363;DP=4628;DP4=1965,2362,9,12;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0920484;MQB=0.717557;MQSB=1.54143e-44;RPB=0.359912;SGB=91.1059;VDB=0.438438;EFF=INTERGENIC(MODIFIER||||||||||1) FN539-S.SNP.8:1898280 chr08:001898280 0 W/1898280-1898280 FN539-S Single Base Substitution T-A INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2692-S.SNP.8:1899404 chr08:001899404 0 W/1899404-1899404 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.594409;DP=4830;DP4=2322,2254,19,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.21599e-19;MQSB=0.963136;RPB=0.281539;SGB=112.373;VDB=0.496753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.8:1919319 chr08:001919319 0 W/1919319-1919319 FN2577-S SNP G -> T AC=2;AN=198;BQB=0.906017;DP=4230;DP4=2079,1897,21,14;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.65406e-17;MQSB=0.999534;RPB=0.208955;SGB=115.647;VDB=0.406853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.8:1921264 chr08:001921264 0 W/1921264-1921264 FN2483 SNP C -> T AC=1;AN=200;BQB=0.781738;DP=4905;DP4=2117,2559,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.96744e-08;MQSB=0.667203;RPB=0.473153;SGB=-0.141083;VDB=0.00212774;EFF=INTRON(MODIFIER||||205|LOC_Os08g04010|protein_coding|CODING|LOC_Os08g04010.1|3|1) FN2442.SNP.8:1923776 chr08:001923776 0 W/1923776-1923776 FN2442 SNP T -> A AC=1;AN=200;BQB=0.99255;DP=4939;DP4=2360,2222,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18425e-18;MQSB=0.939933;RPB=0.287046;SGB=97.9523;VDB=0.337246;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.8:1923777 chr08:001923777 0 W/1923777-1923777 FN2442 SNP C -> A AC=1;AN=200;BQB=0.999578;DP=4950;DP4=2392,2248,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13871e-18;MQSB=0.943943;RPB=0.214827;SGB=65.9573;VDB=0.274409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.8:1924704 chr08:001924704 0 W/1924704-1924704 FN3782-S SNP A -> G AC=1;AN=190;BQB=0.943397;DP=2419;DP4=1235,1095,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.17238e-07;MQSB=0.987414;RPB=0.949638;SGB=44.5415;VDB=0.0325049;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.8:1928271 chr08:001928271 0 W/1928271-1928271 FN537-S Single Base Substitution C-T INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN424-S.SNP.8:1938830 chr08:001938830 0 W/1938830-1938830 FN424-S Single Base Substitution A-G INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2138-S.SNP.8:1940806 chr08:001940806 0 W/1940806-1940806 FN2138-S SNP G -> T AC=1;AN=168;BQB=0.682362;DP=4481;DP4=2210,2236,17,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0557e-13;MQSB=0.999979;RPB=0.218732;SGB=51.3545;VDB=0.797467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.8:1944172 chr08:001944172 0 W/1944172-1944172 FN2789-S SNP C -> T AC=1;AN=198;BQB=0.745748;DP=3795;DP4=2077,1510,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.43501e-07;MQSB=0.116373;RPB=0.634571;SGB=9.3494;VDB=0.153424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.8:1956372 chr08:001956372 0 W/1956372-1956372 FN2333 SNP G -> A AC=1;AN=192;BQB=0.456153;DP=5204;DP4=2534,2350,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.89985e-14;MQSB=0.790043;RPB=0.999869;SGB=-39.2487;VDB=0.415181;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.8:1958060 chr08:001958060 0 W/1958060-1958060 FN551-S Single Base Substitution C-T INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2169-S.SNP.8:1959719 chr08:001959719 0 W/1959719-1959719 FN2169-S SNP G -> A AC=1;AN=168;BQB=0.143074;DP=3263;DP4=1673,1538,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.89931e-06;MQSB=0.328786;RPB=0.491639;SGB=-16.2342;VDB=0.571004;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S8|364|LOC_Os08g04040|protein_coding|CODING|LOC_Os08g04040.1|1|1) FN2387.SNP.8:1959719 chr08:001959719 0 W/1959719-1959719 FN2387 SNP G -> A AC=1;AN=192;BQB=0.482802;DP=5041;DP4=2290,2421,19,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68064e-17;MQSB=0.663315;RPB=0.75836;SGB=167.883;VDB=0.091956;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S8|364|LOC_Os08g04040|protein_coding|CODING|LOC_Os08g04040.1|1|1) FN3979-S.SNP.8:1959719 chr08:001959719 0 W/1959719-1959719 FN3979-S SNP G -> A AC=2;AN=168;BQB=0.973836;DP=2991;DP4=1445,1434,24,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.29318e-21;MQSB=0.405726;RPB=0.841867;SGB=185.097;VDB=0.591343;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S8|364|LOC_Os08g04040|protein_coding|CODING|LOC_Os08g04040.1|1|1) FN488-S.SNP.8:1959719 chr08:001959719 0 W/1959719-1959719 FN488-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1412-S.SNP.8:1959960 chr08:001959960 0 W/1959960-1959960 FN1412-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g04040 retrotransposon protein, putative, unclassified, expressed SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-286.SNP.8:1960548 chr08:001960548 0 W/1960548-1960548 FN-286 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g04040 retrotransposon protein, putative, unclassified, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN4084-S.SNP.8:1961861 chr08:001961861 0 W/1961861-1961861 FN4084-S SNP C -> T AC=2;AN=182;BQB=0.940515;DP=3223;DP4=1437,1688,14,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.71469e-12;MQSB=0.995679;RPB=0.533342;SGB=98.2417;VDB=0.682601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.8:1964930 chr08:001964930 0 W/1964930-1964930 FN-190 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g04050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2146-S.SNP.8:1965597 chr08:001965597 0 W/1965597-1965597 FN2146-S SNP T -> A AC=2;AN=168;BQB=0.426578;DP=3391;DP4=1495,1846,7,23;HOB=0.0235261;ICB=0.494119;MQ=35;MQ0F=0.078148;MQB=0.679652;MQSB=0;RPB=0.967111;SGB=-10.2027;VDB=0.692061;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.8:1966973 chr08:001966973 0 W/1966973-1966973 FN-235 Single Base Substitution C-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2432.SNP.8:1970037 chr08:001970037 0 W/1970037-1970037 FN2432 SNP C -> T AC=1;AN=200;BQB=0.887386;DP=4420;DP4=2060,2051,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81332e-10;MQSB=0.996877;RPB=0.999666;SGB=65.5058;VDB=0.673648;EFF=INTRON(MODIFIER||||813|LOC_Os08g04060|protein_coding|CODING|LOC_Os08g04060.1|4|1) FN1626-S.SNP.8:1974491 chr08:001974491 0 W/1974491-1974491 FN1626-S SNP A -> G AC=1;AN=188;BQB=0.313568;DP=3030;DP4=1185,1806,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65596e-09;MQSB=0.999698;RPB=0.557384;SGB=-64.8159;VDB=0.118093;EFF=INTRON(MODIFIER||||230|LOC_Os08g04070|protein_coding|CODING|LOC_Os08g04070.1|1|1) W252-6-1.SNP.8:1981877 chr08:001981877 0 W/1981877-1981877 W252-6-1 Single Base Substitution C-T INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN1173-S.SNP.8:1985743 chr08:001985743 0 W/1985743-1985743 FN1173-S Single Base Substitution C-T INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1668-S.SNP.8:2001589 chr08:002001589 0 W/2001589-2001589 FN1668-S SNP C -> A AC=2;AN=188;BQB=0.732823;DP=3918;DP4=2083,1777,26,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.54017e-24;MQSB=0.936672;RPB=0.736932;SGB=-51.0657;VDB=0.150174;EFF=INTRON(MODIFIER||||597|LOC_Os08g04120|protein_coding|CODING|LOC_Os08g04120.1|9|1) FN4125-S.SNP.8:2017524 chr08:002017524 0 W/2017524-2017524 FN4125-S SNP T -> A AC=1;AN=182;BQB=0.551867;DP=2761;DP4=958,1697,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.37835e-05;MQSB=0.181784;RPB=0.745247;SGB=15.6115;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.8:2029015 chr08:002029015 0 W/2029015-2029015 FN2555-S SNP T -> C AC=1;AN=198;BQB=0.926693;DP=3687;DP4=1854,1565,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.741e-12;MQSB=0.954108;RPB=0.974646;SGB=-10.2651;VDB=0.395338;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.8:2029016 chr08:002029016 0 W/2029016-2029016 FN2555-S SNP C -> A AC=1;AN=198;BQB=0.981714;DP=3687;DP4=1913,1560,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.48924e-12;MQSB=0.966666;RPB=0.921123;SGB=61.7198;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.8:2029017 chr08:002029017 0 W/2029017-2029017 FN2555-S SNP A -> G AC=1;AN=198;BQB=0.69186;DP=3683;DP4=1917,1521,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.05665e-12;MQSB=0.994159;RPB=0.95832;SGB=34.5346;VDB=0.140754;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.8:2029430 chr08:002029430 0 W/2029430-2029430 FN462-S Single Base Substitution G-A INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3359-S.SNP.8:2031288 chr08:002031288 0 W/2031288-2031288 FN3359-S SNP G -> T AC=1;AN=184;BQB=0.977978;DP=3247;DP4=1567,1611,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36089e-10;MQSB=0.997035;RPB=0.285178;SGB=25.7969;VDB=0.471111;EFF=SPLICE_SITE_REGION(LOW||||471|LOC_Os08g04180|protein_coding|CODING|LOC_Os08g04180.1|2|1),INTRON(MODIFIER||||471|LOC_Os08g04180|protein_coding|CODING|LOC_Os08g04180.1|2|1) FN3843-S.SNP.8:2042645 chr08:002042645 0 W/2042645-2042645 FN3843-S SNP G -> A AC=1;AN=190;BQB=0.981932;DP=2634;DP4=1447,1032,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06268e-08;MQSB=0.967872;RPB=0.192339;SGB=28.7675;VDB=0.765862;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P46S|76|LOC_Os08g04200|protein_coding|CODING|LOC_Os08g04200.1|1|1) FN3064-S.SNP.8:2053504 chr08:002053504 0 W/2053504-2053504 FN3064-S SNP C -> T AC=1;AN=184;BQB=0.969367;DP=3416;DP4=1562,1728,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000332374;MQSB=0.582405;RPB=0.93598;SGB=18.1394;VDB=0.060425;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.8:2053597 chr08:002053597 0 W/2053597-2053597 FN702-S Single Base Substitution C-T INTERGENIC HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN3057-S.SNP.8:2053795 chr08:002053795 0 W/2053795-2053795 FN3057-S SNP G -> C AC=1;AN=184;BQB=0.902982;DP=3209;DP4=1325,1766,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.19915e-09;MQSB=0.472516;RPB=0.746612;SGB=39.2697;VDB=0.541492;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.8:2062675 chr08:002062675 0 W/2062675-2062675 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2670-S.SNP.8:2065133 chr08:002065133 0 W/2065133-2065133 FN2670-S SNP T -> A AC=1;AN=200;BQB=0.988801;DP=5039;DP4=2465,2247,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.12311e-10;MQSB=0.736554;RPB=0.964339;SGB=61.9006;VDB=0.23953;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.8:2066587 chr08:002066587 0 W/2066587-2066587 FN4124-S SNP C -> A AC=1;AN=182;BQB=0.99184;DP=3423;DP4=1842,1509,8,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.23086e-12;MQSB=0.927955;RPB=0.830238;SGB=70.7363;VDB=0.917723;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V10|276|LOC_Os08g04250|protein_coding|CODING|LOC_Os08g04250.1|1|1) FN3725-S.SNP.8:2075366 chr08:002075366 0 W/2075366-2075366 FN3725-S SNP G -> T AC=1;AN=190;BQB=0.952435;DP=2674;DP4=1503,1050,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000373972;MQB=7.15822e-09;MQSB=0.00392675;RPB=0.710148;SGB=71.8647;VDB=0.73794;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.8:2077758 chr08:002077758 0 W/2077758-2077758 FN3799-S SNP T -> C AC=1;AN=190;BQB=0.88645;DP=3117;DP4=1531,1455,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00128329;MQB=0.0192614;MQSB=0.653401;RPB=0.510399;SGB=53.6492;VDB=0.337089;EFF=INTRON(MODIFIER||||376|LOC_Os08g04270|protein_coding|CODING|LOC_Os08g04270.3|1|1),INTRON(MODIFIER||||376|LOC_Os08g04270|protein_coding|CODING|LOC_Os08g04270.1|1|1),INTRON(MODIFIER||||376|LOC_Os08g04270|protein_coding|CODING|LOC_Os08g04270.2|1|1) FN3431-S.SNP.8:2087144 chr08:002087144 0 W/2087144-2087144 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.865548;DP=2445;DP4=1178,1198,1,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000218857;MQSB=0.997655;RPB=0.842104;SGB=30.6558;VDB=0.511899;EFF=INTRON(MODIFIER||||489|LOC_Os08g04280|protein_coding|CODING|LOC_Os08g04280.1|4|1),INTRON(MODIFIER||||443|LOC_Os08g04280|protein_coding|CODING|LOC_Os08g04280.2|4|1) FN1374-S.SNP.8:2095454 chr08:002095454 0 W/2095454-2095454 FN1374-S Single Base Substitution T-A INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-281.SNP.8:2101536 chr08:002101536 0 W/2101536-2101536 FN-281 Single Base Substitution T-G INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3347-S.SNP.8:2101673 chr08:002101673 0 W/2101673-2101673 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.474744;DP=2741;DP4=1154,1466,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45226e-06;MQSB=0.933681;RPB=0.769884;SGB=32.2261;VDB=0.977732;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.8:2102919 chr08:002102919 0 W/2102919-2102919 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.718423;DP=2972;DP4=1346,1527,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78798e-05;MQSB=0.160084;RPB=0.0172448;SGB=25.439;VDB=0.0136563;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.8:2106338 chr08:002106338 0 W/2106338-2106338 FN730-S Single Base Substitution C-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN1252-S.SNP.8:2109101 chr08:002109101 0 W/2109101-2109101 FN1252-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN500-S.SNP.8:2110265 chr08:002110265 0 W/2110265-2110265 FN500-S Single Base Substitution G-A INTRON HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN475-S.SNP.8:2110528 chr08:002110528 0 W/2110528-2110528 FN475-S Single Base Substitution T-C INTRON HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN1739-S.SNP.8:2110557 chr08:002110557 0 W/2110557-2110557 FN1739-S SNP C -> T AC=1;AN=188;BQB=0.0269271;DP=3621;DP4=1904,1652,21,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.1255e-09;MQSB=0.997456;RPB=0.84025;SGB=-225.535;VDB=0.364988;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D282|493|LOC_Os08g04300|protein_coding|CODING|LOC_Os08g04300.1|2|1) FN2354.SNP.8:2112546 chr08:002112546 0 W/2112546-2112546 FN2354 SNP C -> A AC=1;AN=192;BQB=0.990388;DP=5180;DP4=2960,1871,16,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.02306e-12;MQSB=0.97335;RPB=0.986862;SGB=75.4235;VDB=0.860503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.8:2116439 chr08:002116439 0 W/2116439-2116439 FN2354 SNP G -> C AC=1;AN=192;BQB=0.976867;DP=4782;DP4=1884,2569,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000209118;MQB=7.51505e-12;MQSB=0.964138;RPB=0.846985;SGB=10.4835;VDB=0.148798;EFF=INTRON(MODIFIER||||174|LOC_Os08g04310|protein_coding|CODING|LOC_Os08g04310.1|1|1) FN2262-S.SNP.8:2120671 chr08:002120671 0 W/2120671-2120671 FN2262-S SNP C -> T AC=2;AN=190;BQB=0.124436;DP=4821;DP4=2218,2230,18,34;HOB=0.020831;ICB=0.494793;MQ=21;MQ0F=0.0908525;MQB=0.990616;MQSB=0.373085;RPB=0.944606;SGB=118.153;VDB=0.219;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R265K|876|LOC_Os08g04320|protein_coding|CODING|LOC_Os08g04320.1|2|1) FN2756-S.SNP.8:2121835 chr08:002121835 0 W/2121835-2121835 FN2756-S SNP C -> T AC=2;AN=200;BQB=0.855859;DP=4518;DP4=2342,1905,27,7;HOB=0.0198;ICB=0.495051;MQ=30;MQ0F=0.216025;MQB=0.640097;MQSB=0;RPB=0.818577;SGB=112.373;VDB=0.582587;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.8:2125643 chr08:002125643 0 W/2125643-2125643 FN3691-S SNP T -> C AC=1;AN=190;BQB=0.851592;DP=2690;DP4=1558,958,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.40433e-08;MQSB=0.28714;RPB=0.680295;SGB=53.6492;VDB=0.865758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.8:2127292 chr08:002127292 0 W/2127292-2127292 FN2126-S SNP A -> G AC=1;AN=168;BQB=0.0603244;DP=3842;DP4=1735,2067,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85427e-07;MQSB=0.899693;RPB=0.819874;SGB=-38.9357;VDB=0.972054;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.8:2142075 chr08:002142075 0 W/2142075-2142075 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.943203;DP=2803;DP4=1239,1493,14,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.54974e-15;MQSB=0.993743;RPB=0.267103;SGB=81.2689;VDB=0.191323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.8:2147240 chr08:002147240 0 W/2147240-2147240 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.875629;DP=3219;DP4=1368,1690,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.72271e-13;MQSB=0.999524;RPB=0.0197437;SGB=43.8792;VDB=0.0104196;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.8:2150764 chr08:002150764 0 W/2150764-2150764 FN3551-S SNP T -> A AC=2;AN=188;BQB=0.572602;DP=2732;DP4=1292,1349,8,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000366032;MQB=1.59867e-08;MQSB=0.948547;RPB=0.737926;SGB=23.5329;VDB=0.891997;EFF=INTRON(MODIFIER||||253|LOC_Os08g04390|protein_coding|CODING|LOC_Os08g04390.2|1|1) FN-350.SNP.8:2156605 chr08:002156605 0 W/2156605-2156605 FN-350 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1060-S.SNP.8:2157407 chr08:002157407 0 W/2157407-2157407 FN1060-S Single Base Substitution G-A INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2656-S.SNP.8:2160701 chr08:002160701 0 W/2160701-2160701 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.925444;DP=5210;DP4=2676,2168,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60124e-17;MQSB=0.680295;RPB=0.255692;SGB=27.1468;VDB=0.537731;EFF=SPLICE_SITE_DONOR(HIGH||||434|LOC_Os08g04420|protein_coding|CODING|LOC_Os08g04420.1|5|1),SPLICE_SITE_DONOR(HIGH||||434|LOC_Os08g04420|protein_coding|CODING|LOC_Os08g04420.2|6|1),INTRON(MODIFIER||||434|LOC_Os08g04420|protein_coding|CODING|LOC_Os08g04420.1|5|1),INTRON(MODIFIER||||434|LOC_Os08g04420|protein_coding|CODING|LOC_Os08g04420.2|6|1);LOF=(LOC_Os08g04420|LOC_Os08g04420|2|1.00) FN3518-S.SNP.8:2166261 chr08:002166261 0 W/2166261-2166261 FN3518-S SNP C -> T AC=1;AN=188;BQB=0.975486;DP=3307;DP4=1301,1939,2,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.88646e-09;MQSB=0.903897;RPB=0.653758;SGB=58.0655;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.8:2168582 chr08:002168582 0 W/2168582-2168582 FN2476 SNP G -> T AC=1;AN=200;BQB=0.781922;DP=5063;DP4=2542,2225,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52018e-12;MQSB=0.954806;RPB=0.824318;SGB=39.9056;VDB=0.590314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.8:2168585 chr08:002168585 0 W/2168585-2168585 FN2476 SNP T -> A AC=1;AN=200;BQB=0.962047;DP=5101;DP4=2538,2216,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99124e-11;MQSB=0.999896;RPB=0.927705;SGB=14.3054;VDB=0.59569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.8:2173213 chr08:002173213 0 W/2173213-2173213 FN1602-S Single Base Substitution C-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3347-S.SNP.8:2175209 chr08:002175209 0 W/2175209-2175209 FN3347-S SNP T -> G AC=1;AN=184;BQB=0.998835;DP=2764;DP4=1247,1390,4,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.4764e-11;MQSB=0.961068;RPB=0.882991;SGB=53.3568;VDB=0.0636631;EFF=UTR_3_PRIME(MODIFIER||442||111|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.2|3|1),INTRON(MODIFIER||||141|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.1|3|1) FN3347-S.SNP.8:2175213 chr08:002175213 0 W/2175213-2175213 FN3347-S SNP A -> T AC=1;AN=184;BQB=0.978482;DP=2770;DP4=1260,1420,4,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11648e-12;MQSB=0.910991;RPB=0.784785;SGB=33.3622;VDB=0.148055;EFF=UTR_3_PRIME(MODIFIER||438||111|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.2|3|1),INTRON(MODIFIER||||141|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.1|3|1) FN3347-S.SNP.8:2175214 chr08:002175214 0 W/2175214-2175214 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.944884;DP=2768;DP4=1270,1420,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1445e-12;MQSB=0.92308;RPB=0.922949;SGB=56.8786;VDB=0.06689;EFF=UTR_3_PRIME(MODIFIER||437||111|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.2|3|1),INTRON(MODIFIER||||141|LOC_Os08g04440|protein_coding|CODING|LOC_Os08g04440.1|3|1) FN1642-S.SNP.8:2176948 chr08:002176948 0 W/2176948-2176948 FN1642-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os08g04440 RNA recognition motif containing protein, putative, expressed SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1269-S.SNP.8:2177182 chr08:002177182 0 W/2177182-2177182 FN1269-S Single Base Substitution G-A INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN3971-S.SNP.8:2191755 chr08:002191755 0 W/2191755-2191755 FN3971-S SNP A -> G AC=1;AN=168;BQB=0.989379;DP=2728;DP4=1021,1515,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00101672;MQSB=0.988893;RPB=0.375294;SGB=25.5891;VDB=0.226073;EFF=INTERGENIC(MODIFIER||||||||||1) FN-392.SNP.8:2200599 chr08:002200599 0 W/2200599-2200599 FN-392 Single Base Substitution C-G INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN3496-S.SNP.8:2204421 chr08:002204421 0 W/2204421-2204421 FN3496-S SNP C -> A AC=1;AN=188;BQB=0.960892;DP=3519;DP4=1452,1990,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43748e-08;MQSB=0.979402;RPB=0.0236552;SGB=53.5223;VDB=0.0211456;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.8:2210844 chr08:002210844 0 W/2210844-2210844 FN1748-S SNP C -> G AC=1;AN=188;BQB=0.122815;DP=3404;DP4=1841,1529,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.79852e-10;MQSB=0.999396;RPB=0.986201;SGB=-98.724;VDB=0.238333;EFF=INTRON(MODIFIER||||576|LOC_Os08g04500|protein_coding|CODING|LOC_Os08g04500.1|6|1),INTRON(MODIFIER||||516|LOC_Os08g04500|protein_coding|CODING|LOC_Os08g04500.2|5|1) FN2305.SNP.8:2214547 chr08:002214547 0 W/2214547-2214547 FN2305 SNP G -> C AC=1;AN=192;BQB=0.984924;DP=4905;DP4=2055,2581,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.79196e-07;MQSB=0.969904;RPB=0.421339;SGB=-15.333;VDB=0.792993;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.8:2218416 chr08:002218416 0 W/2218416-2218416 FN4150-S SNP G -> T AC=1;AN=170;BQB=0.862805;DP=1921;DP4=868,973,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0140552;MQB=0.0937441;MQSB=0.000403773;RPB=0.982547;SGB=34.5445;VDB=0.592572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.8:2219805 chr08:002219805 0 W/2219805-2219805 FN2703-S SNP G -> A AC=1;AN=200;BQB=0.166897;DP=4712;DP4=2227,2066,10,13;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0165535;MQB=0.000154709;MQSB=6.10023e-12;RPB=0.263858;SGB=-120.485;VDB=0.000127603;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1444|1670|LOC_Os08g04510|protein_coding|CODING|LOC_Os08g04510.1|3|1) FN2676-S.SNP.8:2220498 chr08:002220498 0 W/2220498-2220498 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.358299;DP=4980;DP4=2253,2472,15,20;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00923695;MQB=7.66629e-15;MQSB=0.00188387;RPB=0.998894;SGB=155.578;VDB=0.869718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A1224T|1670|LOC_Os08g04510|protein_coding|CODING|LOC_Os08g04510.1|2|1) FN2593-S.SNP.8:2224640 chr08:002224640 0 W/2224640-2224640 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.588784;DP=4449;DP4=1842,2370,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0746235;MQB=0.828046;MQSB=1.30653e-34;RPB=0.333932;SGB=123.071;VDB=0.266622;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L83|1670|LOC_Os08g04510|protein_coding|CODING|LOC_Os08g04510.1|1|1) FN456-S.SNP.8:2224660 chr08:002224660 0 W/2224660-2224660 FN456-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g04510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN925-S.SNP.8:2234515 chr08:002234515 0 W/2234515-2234515 FN925-S Single Base Substitution G-A INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2794-S.SNP.8:2235835 chr08:002235835 0 W/2235835-2235835 FN2794-S SNP G -> T AC=2;AN=198;BQB=0.973767;DP=4287;DP4=1992,1983,36,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.73078e-23;MQSB=0.982209;RPB=0.825871;SGB=68.3688;VDB=0.677668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.8:2241152 chr08:002241152 0 W/2241152-2241152 FN3803-S SNP C -> T AC=1;AN=190;BQB=0.94369;DP=2768;DP4=1243,1421,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14883e-14;MQSB=0.993351;RPB=0.976728;SGB=78.7471;VDB=0.417724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.8:2241528 chr08:002241528 0 W/2241528-2241528 FN1297-S Single Base Substitution T-C INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN4204-S.SNP.8:2244696 chr08:002244696 0 W/2244696-2244696 FN4204-S SNP G -> A AC=2;AN=170;BQB=0.751874;DP=2265;DP4=876,1293,15,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.04112e-18;MQSB=0.841106;RPB=0.707204;SGB=58.9663;VDB=0.429311;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.8:2245564 chr08:002245564 0 W/2245564-2245564 FN4111-S SNP A -> G AC=1;AN=182;BQB=0.812833;DP=2835;DP4=1341,1383,11,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.89159e-16;MQSB=0.935049;RPB=0.166375;SGB=88.2906;VDB=0.243822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.8:2245899 chr08:002245899 0 W/2245899-2245899 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.277732;DP=4107;DP4=2275,1604,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.47813e-13;MQSB=0.812859;RPB=0.987987;SGB=68.91;VDB=0.880738;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.8:2246885 chr08:002246885 0 W/2246885-2246885 FN-375 Single Base Substitution T-C INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN452-S.SNP.8:2248551 chr08:002248551 0 W/2248551-2248551 FN452-S Single Base Substitution C-A INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN3650-S.SNP.8:2249293 chr08:002249293 0 W/2249293-2249293 FN3650-S SNP C -> G AC=1;AN=190;BQB=0.943655;DP=3088;DP4=1440,1533,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00161917;MQB=5.63687e-09;MQSB=0.430515;RPB=0.139145;SGB=5.66499;VDB=0.830416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2750-S.SNP.8:2250628 chr08:002250628 0 W/2250628-2250628 FN2750-S SNP A -> C AC=1;AN=200;BQB=0.92128;DP=3978;DP4=1929,1597,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.42799e-06;MQSB=0.0181404;RPB=0.182429;SGB=43.8747;VDB=0.590679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.8:2254654 chr08:002254654 0 W/2254654-2254654 FN1115-S Single Base Substitution T-C INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN-131.SNP.8:2270085 chr08:002270085 0 W/2270085-2270085 FN-131 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os08g04560 decarboxylase, putative, expressed SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-131.SNP.8:2270355 chr08:002270355 0 W/2270355-2270355 FN-131 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g04560 decarboxylase, putative, expressed SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3514-S.SNP.8:2271016 chr08:002271016 0 W/2271016-2271016 FN3514-S SNP T -> C AC=2;AN=188;BQB=0.241387;DP=2691;DP4=1446,1135,13,19;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=4.99369e-11;MQSB=0.192517;RPB=0.999115;SGB=66.7689;VDB=0.826213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.8:2272845 chr08:002272845 0 W/2272845-2272845 FN3705-S SNP A -> G AC=1;AN=190;BQB=0.818357;DP=2938;DP4=1315,1431,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23895e-05;MQSB=0.991625;RPB=0.871795;SGB=8.33661;VDB=0.470577;EFF=INTERGENIC(MODIFIER||||||||||1) FN1316-S.SNP.8:2275999 chr08:002275999 0 W/2275999-2275999 FN1316-S Single Base Substitution A-T INTERGENIC HET SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2374.SNP.8:2275999 chr08:002275999 0 W/2275999-2275999 FN2374 SNP A -> T AC=1;AN=192;BQB=0.000549682;DP=4670;DP4=2077,2091,17,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000214133;MQB=1.04245e-10;MQSB=0.858656;RPB=0.00247719;SGB=-275.722;VDB=0.0519548;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.8:2275999 chr08:002275999 0 W/2275999-2275999 FN739-S Single Base Substitution A-T INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. W423-5-1.SNP.8:2278886 chr08:002278886 0 W/2278886-2278886 W423-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2756-S.SNP.8:2280668 chr08:002280668 0 W/2280668-2280668 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.526694;DP=5138;DP4=2372,2499,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.01763e-12;MQSB=0.997975;RPB=0.386985;SGB=19.1209;VDB=0.446842;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N251|281|LOC_Os08g04570|protein_coding|CODING|LOC_Os08g04570.1|2|1) FN1553-S.SNP.8:2280958 chr08:002280958 0 W/2280958-2280958 FN1553-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g04570 expressed protein SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. W591-4-1.SNP.8:2309914 chr08:002309914 0 W/2309914-2309914 W591-4-1 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN948-S.SNP.8:2309999 chr08:002309999 0 W/2309999-2309999 FN948-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN1465-S.SNP.8:2314298 chr08:002314298 0 W/2314298-2314298 FN1465-S Single Base Substitution T-A INTRON HOMO SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN-78.SNP.8:2315331 chr08:002315331 0 W/2315331-2315331 FN-78 Single Base Substitution T-A INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1064-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN1064-S Single Base Substitution C-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2130-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN2130-S SNP C -> T AC=1;AN=168;BQB=0.916914;DP=2450;DP4=1168,1242,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87103e-06;MQSB=0.973184;RPB=0.320987;SGB=-74.9395;VDB=0.0454163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.652407;DP=3944;DP4=2095,1608,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.05805e-08;MQSB=0.952971;RPB=0.462999;SGB=58.1246;VDB=0.851202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN3696-S SNP C -> T AC=1;AN=190;BQB=0.837539;DP=2934;DP4=1521,1257,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27261e-14;MQSB=0.999019;RPB=0.53851;SGB=99.1879;VDB=0.436358;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN4177-S SNP C -> T AC=2;AN=170;BQB=0.925767;DP=2496;DP4=1338,1067,9,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.67094e-10;MQSB=0.998669;RPB=0.641053;SGB=70.0854;VDB=0.536368;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN551-S Single Base Substitution C-T INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN750-S.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN750-S Single Base Substitution C-T INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN_809-6-1.SNP.8:2316747 chr08:002316747 0 W/2316747-2316747 FN_809-6-1 Single Base Substitution C-T Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2666-S.SNP.8:2317753 chr08:002317753 0 W/2317753-2317753 FN2666-S SNP T -> A AC=1;AN=200;BQB=0.985231;DP=4816;DP4=2154,2465,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23793e-12;MQSB=0.966753;RPB=0.994004;SGB=37.3004;VDB=0.32259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.8:2321852 chr08:002321852 0 W/2321852-2321852 FN1292-S Single Base Substitution A-G INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN478-S.SNP.8:2322927 chr08:002322927 0 W/2322927-2322927 FN478-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-141.SNP.8:2343447 chr08:002343447 0 W/2343447-2343447 FN-141 Single Base Substitution G-T INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN3650-S.SNP.8:2352821 chr08:002352821 0 W/2352821-2352821 FN3650-S SNP A -> G AC=2;AN=190;BQB=0.182046;DP=2595;DP4=817,1658,17,18;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0242775;MQB=0.221835;MQSB=0.225078;RPB=0.981087;SGB=114.286;VDB=0.93397;EFF=INTRON(MODIFIER||||702|LOC_Os08g04720|protein_coding|CODING|LOC_Os08g04720.1|1|1) FN1061-S.SNP.8:2357935 chr08:002357935 0 W/2357935-2357935 FN1061-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g04730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2358.SNP.8:2361810 chr08:002361810 0 W/2361810-2361810 FN2358 SNP G -> A AC=2;AN=192;BQB=0.991517;DP=4468;DP4=2033,2114,18,16;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00111907;MQB=1.29234e-09;MQSB=0.0162912;RPB=0.311112;SGB=72.5078;VDB=0.332857;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.8:2372186 chr08:002372186 0 W/2372186-2372186 FN3971-S SNP G -> A AC=2;AN=168;BQB=0.905076;DP=2351;DP4=1105,1150,6,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.94946e-07;MQSB=0.587751;RPB=0.614104;SGB=41.6096;VDB=0.587892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A259V|321|LOC_Os08g04760|protein_coding|CODING|LOC_Os08g04760.1|2|1) FN496-S.SNP.8:2381031 chr08:002381031 0 W/2381031-2381031 FN496-S Single Base Substitution G-C INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN-99.SNP.8:2384083 chr08:002384083 0 W/2384083-2384083 FN-99 Single Base Substitution T-G INTRON HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN424-S.SNP.8:2388462 chr08:002388462 0 W/2388462-2388462 FN424-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3738-S.SNP.8:2392683 chr08:002392683 0 W/2392683-2392683 FN3738-S SNP A -> C AC=1;AN=190;BQB=0.886915;DP=2796;DP4=1265,1368,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.78668e-07;MQSB=0.995774;RPB=0.576615;SGB=39.9877;VDB=0.740471;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E406D|466|LOC_Os08g04790|protein_coding|CODING|LOC_Os08g04790.1|4|1) FN2114-S.SNP.8:2392830 chr08:002392830 0 W/2392830-2392830 FN2114-S SNP A -> G AC=1;AN=168;BQB=0.331421;DP=3593;DP4=2039,1507,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000175717;MQSB=0.930976;RPB=0.995893;SGB=17.3231;VDB=0.911117;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T455|466|LOC_Os08g04790|protein_coding|CODING|LOC_Os08g04790.1|4|1) FN2103-S.SNP.8:2398123 chr08:002398123 0 W/2398123-2398123 FN2103-S SNP G -> T AC=1;AN=168;BQB=0.0178758;DP=4099;DP4=2071,1955,16,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.97843e-12;MQSB=0.96872;RPB=0.370696;SGB=-155.04;VDB=0.630778;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.8:2398536 chr08:002398536 0 W/2398536-2398536 FN3714-S SNP T -> G AC=2;AN=190;BQB=0.818733;DP=3069;DP4=1318,1589,33,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44637e-31;MQSB=0.997676;RPB=0.93594;SGB=262.137;VDB=0.735355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.8:2398916 chr08:002398916 0 W/2398916-2398916 FN1363-S Single Base Substitution T-A INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN487-S.SNP.8:2400596 chr08:002400596 0 W/2400596-2400596 FN487-S Single Base Substitution A-G INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN-332.SNP.8:2402396 chr08:002402396 0 W/2402396-2402396 FN-332 Single Base Substitution T-C INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4230-S.SNP.8:2402847 chr08:002402847 0 W/2402847-2402847 FN4230-S SNP A -> T AC=2;AN=170;BQB=0.977408;DP=2208;DP4=931,1177,6,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.03119e-13;MQSB=0.999009;RPB=0.978806;SGB=92.2986;VDB=0.347994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.8:2404154 chr08:002404154 0 W/2404154-2404154 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.968939;DP=2298;DP4=1120,1115,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.149e-07;MQSB=0.972291;RPB=0.954336;SGB=28.7043;VDB=0.74549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-238.SNP.8:2416233 chr08:002416233 0 W/2416233-2416233 FN-238 Single Base Substitution C-A INTRON HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1310-S.SNP.8:2418827 chr08:002418827 0 W/2418827-2418827 FN1310-S Single Base Substitution G-T INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1582-S.SNP.8:2422828 chr08:002422828 0 W/2422828-2422828 FN1582-S Single Base Substitution G-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN-114.SNP.8:2423239 chr08:002423239 0 W/2423239-2423239 FN-114 Single Base Substitution C-A INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN-178.SNP.8:2442659 chr08:002442659 0 W/2442659-2442659 FN-178 Single Base Substitution C-A INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-91.SNP.8:2443498 chr08:002443498 0 W/2443498-2443498 FN-91 Single Base Substitution T-G INTERGENIC HET SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN2588-S.SNP.8:2446083 chr08:002446083 0 W/2446083-2446083 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.977489;DP=3965;DP4=1911,1846,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0156368;MQB=0.969012;MQSB=0;RPB=0.637496;SGB=54.144;VDB=0.740357;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L741|1070|LOC_Os08g04850|protein_coding|CODING|LOC_Os08g04850.1|5|1) FN848-S.SNP.8:2454126 chr08:002454126 0 W/2454126-2454126 FN848-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN733-S.SNP.8:2463113 chr08:002463113 0 W/2463113-2463113 FN733-S Single Base Substitution C-G INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN2129-S.SNP.8:2466567 chr08:002466567 0 W/2466567-2466567 FN2129-S SNP C -> G AC=1;AN=168;BQB=0.0259684;DP=4258;DP4=1952,2270,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.15268e-07;MQSB=0.999026;RPB=0.194498;SGB=-100.631;VDB=0.215117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.8:2478140 chr08:002478140 0 W/2478140-2478140 FN2305 SNP C -> A AC=1;AN=192;BQB=0.874823;DP=4849;DP4=2549,2017,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2438e-18;MQSB=0.891299;RPB=0.705905;SGB=93.2452;VDB=0.505587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.8:2478141 chr08:002478141 0 W/2478141-2478141 FN2305 SNP T -> G AC=1;AN=192;BQB=0.999975;DP=4846;DP4=2560,2000,14,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.04036e-17;MQSB=0.819476;RPB=0.851588;SGB=29.2557;VDB=0.716493;EFF=INTERGENIC(MODIFIER||||||||||1) FN3556-S.SNP.8:2491090 chr08:002491090 0 W/2491090-2491090 FN3556-S SNP T -> C AC=1;AN=188;BQB=0.958427;DP=2921;DP4=1289,1496,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.00547758;MQB=0.478169;MQSB=0.315761;RPB=0.325892;SGB=54.0524;VDB=0.280337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I618V|1027|LOC_Os08g04880|protein_coding|CODING|LOC_Os08g04880.1|1|1) FN973-S.SNP.8:2500422 chr08:002500422 0 W/2500422-2500422 FN973-S Single Base Substitution A-T INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2649-S.SNP.8:2500913 chr08:002500913 0 W/2500913-2500913 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.926132;DP=5067;DP4=2502,2235,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96926e-20;MQSB=0.998603;RPB=0.996484;SGB=68.5625;VDB=0.069338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.8:2503090 chr08:002503090 0 W/2503090-2503090 FN3285-S SNP T -> A AC=1;AN=184;BQB=0.716553;DP=2746;DP4=1171,1473,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000924388;MQSB=0.881312;RPB=0.760375;SGB=28.7043;VDB=0.335038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:2505043 chr08:002505043 0 W/2505043-2505043 FN3696-S SNP G -> T AC=1;AN=190;BQB=0.985224;DP=2696;DP4=1194,1421,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17768e-06;MQSB=0.992181;RPB=0.974228;SGB=35.4339;VDB=0.515403;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.8:2507002 chr08:002507002 0 W/2507002-2507002 FN513-S Single Base Substitution T-A INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2789-S.SNP.8:2518139 chr08:002518139 0 W/2518139-2518139 FN2789-S SNP A -> G AC=1;AN=198;BQB=0.807813;DP=3971;DP4=1943,1859,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.36433e-11;MQSB=0.905619;RPB=0.999302;SGB=-11.4553;VDB=0.984014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.8:2520760 chr08:002520760 0 W/2520760-2520760 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.982177;DP=3441;DP4=1454,1792,5,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47353e-11;MQSB=0.760188;RPB=0.990653;SGB=81.7147;VDB=0.488789;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.8:2521487 chr08:002521487 0 W/2521487-2521487 FN2495 SNP T -> G AC=2;AN=200;BQB=0.316134;DP=4284;DP4=2037,1911,10,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.82584e-18;MQSB=0.991482;RPB=0.465585;SGB=68.5625;VDB=0.778197;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.8:2523257 chr08:002523257 0 W/2523257-2523257 FN449-S Single Base Substitution C-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3692-S.SNP.8:2533053 chr08:002533053 0 W/2533053-2533053 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.991723;DP=2995;DP4=1471,1425,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.134224;MQB=0.990264;MQSB=0.131223;RPB=0.952985;SGB=39.9877;VDB=0.949958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G655R|1728|LOC_Os08g04950|protein_coding|CODING|LOC_Os08g04950.1|4|1) FN2124-S.SNP.8:2542860 chr08:002542860 0 W/2542860-2542860 FN2124-S SNP T -> A AC=1;AN=168;BQB=0.000831479;DP=4032;DP4=1967,1924,17,28;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.91379e-09;MQSB=0.990897;RPB=0.670607;SGB=-497.989;VDB=0.0237823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.8:2542960 chr08:002542960 0 W/2542960-2542960 FN2724-S SNP G -> C AC=1;AN=200;BQB=0.606649;DP=4553;DP4=1997,2182,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.61548e-11;MQSB=0.0433364;RPB=0.587784;SGB=58.2954;VDB=0.377978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.8:2543933 chr08:002543933 0 W/2543933-2543933 FN1140-S Single Base Substitution G-C INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN401-S.SNP.8:2545678 chr08:002545678 0 W/2545678-2545678 FN401-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g04970 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN429-S.SNP.8:2546531 chr08:002546531 0 W/2546531-2546531 FN429-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3345-S.SNP.8:2551764 chr08:002551764 0 W/2551764-2551764 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.994825;DP=2713;DP4=1357,1228,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.86716e-09;MQSB=0.744995;RPB=0.403793;SGB=71.3514;VDB=0.210254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.8:2557804 chr08:002557804 0 W/2557804-2557804 FN1448-S Single Base Substitution T-A INTRON HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2083-S.SNP.8:2558168 chr08:002558168 0 W/2558168-2558168 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.89616;DP=3970;DP4=2285,1488,80,92;HOB=7.08617e-05;ICB=0.000142567;MQ=31;MQ0F=0.123678;MQB=1.54959e-20;MQSB=0;RPB=0.0494171;SGB=-2207.68;VDB=0.46885;EFF=INTRON(MODIFIER||||721|LOC_Os08g04990|protein_coding|CODING|LOC_Os08g04990.1|1|1) FN4206-S.SNP.8:2563768 chr08:002563768 0 W/2563768-2563768 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.913044;DP=2913;DP4=1267,1582,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0205973;MQB=0.931895;MQSB=0.000966928;RPB=0.0259203;SGB=31.4354;VDB=0.0787609;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.8:2576489 chr08:002576489 0 W/2576489-2576489 FN769-S Single Base Substitution C-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1734-S.SNP.8:2579479 chr08:002579479 0 W/2579479-2579479 FN1734-S SNP C -> A AC=2;AN=188;BQB=0.400353;DP=4282;DP4=1928,2318,11,15;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.16905e-07;MQSB=6.43187e-12;RPB=0.0396878;SGB=-40.1048;VDB=0.614017;EFF=INTRON(MODIFIER||||225|LOC_Os08g05030|protein_coding|CODING|LOC_Os08g05030.1|5|1),INTRON(MODIFIER||||145|LOC_Os08g05030|protein_coding|CODING|LOC_Os08g05030.3|4|1),INTRON(MODIFIER||||198|LOC_Os08g05030|protein_coding|CODING|LOC_Os08g05030.2|5|1) FN2112-S.SNP.8:2583276 chr08:002583276 0 W/2583276-2583276 FN2112-S SNP A -> C AC=1;AN=168;BQB=0.181262;DP=3483;DP4=1748,1675,24,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10166e-17;MQSB=0.964244;RPB=0.981782;SGB=-336.576;VDB=0.300543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.8:2588837 chr08:002588837 0 W/2588837-2588837 FN1213-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN-141.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN-141 Single Base Substitution C-T INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-163.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN-163 Single Base Substitution C-T INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-218.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN-218 Single Base Substitution C-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-272.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN-272 Single Base Substitution C-T INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3758-S.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN3758-S SNP C -> T AC=2;AN=190;BQB=0.549854;DP=3306;DP4=1458,1720,19,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.81776e-20;MQSB=0.377423;RPB=0.0706877;SGB=92.6144;VDB=0.262286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN3999-S SNP C -> T AC=2;AN=168;BQB=0.822928;DP=3308;DP4=1437,1749,8,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.33975e-06;MQSB=0.524791;RPB=0.193376;SGB=38.1788;VDB=0.262455;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN497-S Single Base Substitution C-T INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN548-S.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN548-S Single Base Substitution C-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN598-S.SNP.8:2596687 chr08:002596687 0 W/2596687-2596687 FN598-S Single Base Substitution C-T INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. W416-6-1.SNP.8:2598617 chr08:002598617 0 W/2598617-2598617 W416-6-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g05060 retrotransposon, putative, centromere-specific, expressed SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2638-S.SNP.8:2603088 chr08:002603088 0 W/2603088-2603088 FN2638-S SNP C -> G AC=1;AN=200;BQB=0.985587;DP=4858;DP4=2519,2062,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54739e-09;MQSB=0.999963;RPB=0.894262;SGB=54.6902;VDB=0.970126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.8:2607775 chr08:002607775 0 W/2607775-2607775 FN3411-S SNP G -> A AC=1;AN=184;BQB=0.999707;DP=2588;DP4=1322,1189,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.53569e-07;MQSB=0.907481;RPB=0.996834;SGB=48.7425;VDB=0.79958;EFF=INTRON(MODIFIER||||257|LOC_Os08g05070|protein_coding|CODING|LOC_Os08g05070.1|1|1) FN520-S.SNP.8:2607925 chr08:002607925 0 W/2607925-2607925 FN520-S Single Base Substitution A-T INTRON HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN4241-S.SNP.8:2612816 chr08:002612816 0 W/2612816-2612816 FN4241-S SNP T -> C AC=1;AN=170;BQB=0.937895;DP=1808;DP4=608,1082,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00110619;MQB=8.17336e-09;MQSB=0.000188648;RPB=0.695896;SGB=78.9707;VDB=0.915789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.8:2621877 chr08:002621877 0 W/2621877-2621877 FN1650-S Single Base Substitution C-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3378-S.SNP.8:2624816 chr08:002624816 0 W/2624816-2624816 FN3378-S SNP A -> G AC=2;AN=184;BQB=0.928274;DP=3030;DP4=1598,1334,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.28158e-13;MQSB=0.934567;RPB=0.9944;SGB=78.0093;VDB=0.652804;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.8:2629601 chr08:002629601 0 W/2629601-2629601 FN1686-S SNP A -> T AC=2;AN=188;BQB=0.736261;DP=4227;DP4=2084,2079,23,23;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0804353;MQB=0.408059;MQSB=5.80633e-12;RPB=0.0948345;SGB=51.837;VDB=0.43639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.8:2629751 chr08:002629751 0 W/2629751-2629751 FN2544-S SNP A -> T AC=1;AN=198;BQB=0.943172;DP=4778;DP4=2157,2414,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.717e-09;MQSB=0.574983;RPB=0.234525;SGB=31.9395;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.8:2629751 chr08:002629751 0 W/2629751-2629751 FN926-S Single Base Substitution A-T INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN669-S.SNP.8:2630308 chr08:002630308 0 W/2630308-2630308 FN669-S Single Base Substitution G-A INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3765-S.SNP.8:2632362 chr08:002632362 0 W/2632362-2632362 FN3765-S SNP C -> T AC=2;AN=190;BQB=0.876675;DP=2646;DP4=1360,1210,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.42439e-13;MQSB=0.968604;RPB=0.657915;SGB=99.1879;VDB=0.864873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.8:2640163 chr08:002640163 0 W/2640163-2640163 FN1133-S Single Base Substitution G-C INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN1158-S.SNP.8:2642328 chr08:002642328 0 W/2642328-2642328 FN1158-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN678-S.SNP.8:2646525 chr08:002646525 0 W/2646525-2646525 FN678-S Single Base Substitution G-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN678-S.SNP.8:2646527 chr08:002646527 0 W/2646527-2646527 FN678-S Single Base Substitution A-G INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3819-S.SNP.8:2653669 chr08:002653669 0 W/2653669-2653669 FN3819-S SNP A -> G AC=1;AN=190;BQB=0.824775;DP=2956;DP4=1467,1348,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00913396;MQB=0.883817;MQSB=0.000565183;RPB=0.161567;SGB=90.0802;VDB=0.721916;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I656T|827|LOC_Os08g05130|protein_coding|CODING|LOC_Os08g05130.1|6|1) FN2483.SNP.8:2654860 chr08:002654860 0 W/2654860-2654860 FN2483 SNP A -> G AC=1;AN=200;BQB=0.958245;DP=4249;DP4=1929,1798,10,19;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0122382;MQB=0.00157286;MQSB=9.64189e-18;RPB=0.994887;SGB=27.1468;VDB=0.471799;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S360P|827|LOC_Os08g05130|protein_coding|CODING|LOC_Os08g05130.1|2|1) FN2592-S.SNP.8:2654873 chr08:002654873 0 W/2654873-2654873 FN2592-S SNP G -> A AC=2;AN=198;BQB=0.946072;DP=3595;DP4=1813,1514,14,18;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.00139082;MQB=2.88063e-12;MQSB=7.77862e-13;RPB=0.410791;SGB=104.861;VDB=0.939522;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D355|827|LOC_Os08g05130|protein_coding|CODING|LOC_Os08g05130.1|2|1) FN1477-S.SNP.8:2656931 chr08:002656931 0 W/2656931-2656931 FN1477-S Single Base Substitution T-G INTERGENIC Homo SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN3821-S.SNP.8:2659379 chr08:002659379 0 W/2659379-2659379 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.863425;DP=2484;DP4=1205,1191,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02054e-07;MQSB=0.969872;RPB=0.273246;SGB=49.0954;VDB=0.32634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A289S|325|LOC_Os08g05140|protein_coding|CODING|LOC_Os08g05140.1|2|1) FN1250-S.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN1250-S Single Base Substitution G-C INTRON HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2334.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN2334 SNP G -> C AC=2;AN=192;BQB=0.94385;DP=4589;DP4=1919,2471,9,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000217912;MQB=2.63507e-14;MQSB=0.918542;RPB=0.724859;SGB=64.8148;VDB=0.699261;EFF=INTRON(MODIFIER||||325|LOC_Os08g05140|protein_coding|CODING|LOC_Os08g05140.1|2|1) FN3930-S.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN3930-S SNP G -> C AC=2;AN=156;BQB=0.994672;DP=2427;DP4=1094,1222,18,16;HOB=0.0253123;ICB=0.493673;MQ=49;MQ0F=0;MQB=5.68902e-20;MQSB=0.919795;RPB=0.998158;SGB=143.195;VDB=0.357648;EFF=INTRON(MODIFIER||||325|LOC_Os08g05140|protein_coding|CODING|LOC_Os08g05140.1|2|1) FN536-S.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN536-S Single Base Substitution G-C INTRON HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN727-S.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN727-S Single Base Substitution G-C INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.8:2659571 chr08:002659571 0 W/2659571-2659571 FN867-S Single Base Substitution G-C INTRON HOMO SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN2791-S.SNP.8:2661450 chr08:002661450 0 W/2661450-2661450 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.760425;DP=4434;DP4=1888,2328,5,16;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0101488;MQB=0.251112;MQSB=0.174292;RPB=0.673528;SGB=65.3149;VDB=0.323416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.8:2664995 chr08:002664995 0 W/2664995-2664995 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.981729;DP=3034;DP4=1573,1393,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0108767;MQB=0.857426;MQSB=0;RPB=0.00248041;SGB=71.6954;VDB=0.0243497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.8:2672261 chr08:002672261 0 W/2672261-2672261 FN3979-S SNP T -> C AC=1;AN=168;BQB=0.984839;DP=2386;DP4=1088,1222,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.51408e-08;MQSB=0.925323;RPB=0.846152;SGB=41.6096;VDB=0.315586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.8:2674587 chr08:002674587 0 W/2674587-2674587 FN1757-S SNP A -> T AC=2;AN=188;BQB=0.977209;DP=3946;DP4=1963,1923,22,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.2753e-21;MQSB=0.992396;RPB=0.859772;SGB=-47.8688;VDB=0.0371881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.8:2674636 chr08:002674636 0 W/2674636-2674636 FN3859-S SNP T -> C AC=1;AN=156;BQB=0.980889;DP=2504;DP4=1264,1158,3,4;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=8.57607e-05;MQSB=0.995692;RPB=0.360581;SGB=25.2211;VDB=0.66694;EFF=INTERGENIC(MODIFIER||||||||||1) W279-4-1.SNP.8:2689337 chr08:002689337 0 W/2689337-2689337 W279-4-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3343-S.SNP.8:2691239 chr08:002691239 0 W/2691239-2691239 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.991428;DP=2772;DP4=1073,1492,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.10088e-07;MQSB=0.99256;RPB=0.97382;SGB=28.7043;VDB=0.475586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.8:2691544 chr08:002691544 0 W/2691544-2691544 FN2460 SNP C -> T AC=1;AN=200;BQB=0.975012;DP=3740;DP4=1803,1741,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10646e-08;MQSB=0.00697443;RPB=0.700606;SGB=58.8698;VDB=0.509971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.8:2692427 chr08:002692427 0 W/2692427-2692427 FN2379 SNP G -> A AC=2;AN=192;BQB=0.999106;DP=4846;DP4=2237,2275,33,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.0467e-34;MQSB=0.806115;RPB=0.494028;SGB=164.824;VDB=0.336281;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.8:2694104 chr08:002694104 0 W/2694104-2694104 FN664-S Single Base Substitution G-C INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. 703-4.SNP.8:2697131 chr08:002697131 0 W/2697131-2697131 703-4 Single Base Substitution T-C INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN_N1-151-7.SNP.8:2712899 chr08:002712899 0 W/2712899-2712899 FN_N1-151-7 Single Base Substitution T-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2630-S.SNP.8:2717474 chr08:002717474 0 W/2717474-2717474 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.296482;DP=4210;DP4=2242,1724,14,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00213777;MQB=7.04629e-10;MQSB=0.921568;RPB=0.688043;SGB=104.921;VDB=0.0131031;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A192|766|LOC_Os08g05220|protein_coding|CODING|LOC_Os08g05220.1|1|1) FN931-S.SNP.8:2720390 chr08:002720390 0 W/2720390-2720390 FN931-S Single Base Substitution T-C INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN890-S.SNP.8:2724706 chr08:002724706 0 W/2724706-2724706 FN890-S Single Base Substitution A-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN890-S.SNP.8:2724710 chr08:002724710 0 W/2724710-2724710 FN890-S Single Base Substitution C-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1559-S.SNP.8:2725878 chr08:002725878 0 W/2725878-2725878 FN1559-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g05240 retrotransposon protein, putative, unclassified, expressed SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2701-S.SNP.8:2736978 chr08:002736978 0 W/2736978-2736978 FN2701-S SNP G -> C AC=1;AN=200;BQB=0.655312;DP=5165;DP4=2651,2206,20,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10517e-14;MQSB=0.857325;RPB=0.271455;SGB=58.1418;VDB=0.153135;EFF=INTRON(MODIFIER||||1417|LOC_Os08g05250|protein_coding|CODING|LOC_Os08g05250.1|2|1) FN901-S.SNP.8:2737393 chr08:002737393 0 W/2737393-2737393 FN901-S Single Base Substitution T-G INTRON HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2355.SNP.8:2745130 chr08:002745130 0 W/2745130-2745130 FN2355 SNP G -> T AC=2;AN=192;BQB=0.016043;DP=4984;DP4=2321,2376,23,23;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.0178571;MQB=9.37548e-16;MQSB=0.0174159;RPB=0.95679;SGB=52.7209;VDB=0.754165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.8:2765432 chr08:002765432 0 W/2765432-2765432 FN2182-S SNP C -> T AC=1;AN=190;BQB=0.330617;DP=4675;DP4=2004,2341,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06403e-16;MQSB=0.791363;RPB=0.448406;SGB=-42.1241;VDB=0.762417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.8:2765433 chr08:002765433 0 W/2765433-2765433 FN2182-S SNP C -> T AC=1;AN=190;BQB=0.687245;DP=4680;DP4=2040,2377,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32701e-15;MQSB=0.753753;RPB=0.03636;SGB=22.7576;VDB=0.713769;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.8:2773536 chr08:002773536 0 W/2773536-2773536 FN2689-S SNP G -> T AC=1;AN=200;BQB=0.767009;DP=4979;DP4=2494,2149,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05342e-07;MQSB=0.993264;RPB=0.44757;SGB=45.0543;VDB=0.179012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A817S|1001|LOC_Os08g05290|protein_coding|CODING|LOC_Os08g05290.1|1|1) FN2689-S.SNP.8:2773537 chr08:002773537 0 W/2773537-2773537 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.560898;DP=4970;DP4=2595,2109,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.80275e-06;MQSB=0.998758;RPB=0.664223;SGB=35.8441;VDB=0.380722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A817V|1001|LOC_Os08g05290|protein_coding|CODING|LOC_Os08g05290.1|1|1) FN-102.SNP.8:2775455 chr08:002775455 0 W/2775455-2775455 FN-102 Single Base Substitution T-A INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2646-S.SNP.8:2780851 chr08:002780851 0 W/2780851-2780851 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.827051;DP=5165;DP4=2824,2069,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.89033e-11;MQSB=0.998984;RPB=0.984457;SGB=34.6953;VDB=0.953135;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.8:2781630 chr08:002781630 0 W/2781630-2781630 FN1283-S Single Base Substitution T-C INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1263-S.SNP.8:2789410 chr08:002789410 0 W/2789410-2789410 FN1263-S Single Base Substitution A-G INTRON HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3542-S.SNP.8:2795062 chr08:002795062 0 W/2795062-2795062 FN3542-S SNP T -> A AC=1;AN=188;BQB=0.558447;DP=3485;DP4=1356,1968,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.25819e-05;MQSB=0.838527;RPB=0.156827;SGB=44.4357;VDB=0.165711;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.8:2798458 chr08:002798458 0 W/2798458-2798458 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.995877;DP=2723;DP4=1327,1281,16,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.32181e-13;MQSB=0.889664;RPB=0.714631;SGB=114.512;VDB=0.99955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.8:2805158 chr08:002805158 0 W/2805158-2805158 FN3529-S SNP C -> A AC=1;AN=188;BQB=0.741813;DP=2947;DP4=1226,1671,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.86759e-08;MQSB=0.993002;RPB=0.999493;SGB=48.979;VDB=0.162982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.8:2805160 chr08:002805160 0 W/2805160-2805160 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.97343;DP=2972;DP4=1234,1681,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.72142e-08;MQSB=0.994076;RPB=0.997271;SGB=48.979;VDB=0.158054;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.8:2806744 chr08:002806744 0 W/2806744-2806744 FN-154 Single Base Substitution A-C INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN2107-S.SNP.8:2807227 chr08:002807227 0 W/2807227-2807227 FN2107-S SNP G -> T AC=1;AN=168;BQB=0.217402;DP=4155;DP4=2171,1946,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39483e-07;MQSB=0.86095;RPB=0.6017;SGB=-38.9357;VDB=0.266376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.8:2808649 chr08:002808649 0 W/2808649-2808649 FN3376-S SNP G -> A AC=2;AN=184;BQB=0.314516;DP=3244;DP4=1414,1686,26,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.80756e-22;MQSB=0.775988;RPB=0.0377943;SGB=166.054;VDB=0.33409;EFF=UTR_5_PRIME(MODIFIER||1418||250|LOC_Os08g05340|protein_coding|CODING|LOC_Os08g05340.1|1|1) FN3326-S.SNP.8:2813429 chr08:002813429 0 W/2813429-2813429 FN3326-S SNP C -> G AC=1;AN=184;BQB=0.636865;DP=2944;DP4=1380,1471,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.49965e-09;MQSB=0.968149;RPB=0.662266;SGB=8.32411;VDB=0.323428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.8:2817193 chr08:002817193 0 W/2817193-2817193 FN3424-S SNP G -> A AC=1;AN=184;BQB=0.939841;DP=2842;DP4=1434,1316,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83767e-07;MQSB=0.999266;RPB=0.654278;SGB=28.7043;VDB=0.810801;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.8:2817407 chr08:002817407 0 W/2817407-2817407 FN2789-S SNP G -> T AC=1;AN=198;BQB=0.896749;DP=4485;DP4=2129,2132,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.99618e-08;MQSB=0.711365;RPB=0.346171;SGB=81.7147;VDB=0.813003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.8:2830510 chr08:002830510 0 W/2830510-2830510 FN1646-S Single Base Substitution G-A INTERGENIC Homo SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1646-S.SNP.8:2830511 chr08:002830511 0 W/2830511-2830511 FN1646-S Single Base Substitution T-A INTERGENIC Homo SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2674-S.SNP.8:2832273 chr08:002832273 0 W/2832273-2832273 FN2674-S SNP A -> G AC=2;AN=200;BQB=0.662056;DP=4950;DP4=2469,2194,27,24;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00969697;MQB=0.0213309;MQSB=0.132882;RPB=0.497925;SGB=173.661;VDB=0.157586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.8:2852501 chr08:002852501 0 W/2852501-2852501 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.903978;DP=4181;DP4=1916,2018,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.30106e-07;MQSB=0.913873;RPB=0.617746;SGB=29.3637;VDB=0.0677962;EFF=INTRON(MODIFIER||||429|LOC_Os08g05410|protein_coding|CODING|LOC_Os08g05410.1|1|1) FN3562-S.SNP.8:2853428 chr08:002853428 0 W/2853428-2853428 FN3562-S SNP A -> G AC=1;AN=188;BQB=0.804994;DP=2631;DP4=1372,1168,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17389e-11;MQSB=0.999985;RPB=0.955783;SGB=14.798;VDB=0.330538;EFF=INTRON(MODIFIER||||429|LOC_Os08g05410|protein_coding|CODING|LOC_Os08g05410.1|1|1) FN4160-S.SNP.8:2854800 chr08:002854800 0 W/2854800-2854800 FN4160-S SNP T -> G AC=2;AN=170;BQB=0.997263;DP=2404;DP4=1134,1176,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.77799e-12;MQSB=0.978006;RPB=0.965168;SGB=41.8678;VDB=0.788782;EFF=INTRON(MODIFIER||||429|LOC_Os08g05410|protein_coding|CODING|LOC_Os08g05410.1|1|1) FN4221-S.SNP.8:2895755 chr08:002895755 0 W/2895755-2895755 FN4221-S SNP G -> A AC=2;AN=170;BQB=0.866102;DP=2526;DP4=1260,1199,14,7;HOB=0.0232526;ICB=0.494188;MQ=14;MQ0F=0.429929;MQB=0.038381;MQSB=0;RPB=0.293392;SGB=62.4192;VDB=0.10079;EFF=INTRON(MODIFIER||||1680|LOC_Os08g05450|protein_coding|CODING|LOC_Os08g05450.1|11|1) FN2337.SNP.8:2903816 chr08:002903816 0 W/2903816-2903816 FN2337 SNP C -> T AC=1;AN=192;BQB=0.905303;DP=4882;DP4=1928,2581,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.84687e-08;MQSB=0.998665;RPB=0.771516;SGB=8.91915;VDB=0.0369041;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.8:2908281 chr08:002908281 0 W/2908281-2908281 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN661-S.SNP.8:2913662 chr08:002913662 0 W/2913662-2913662 FN661-S Single Base Substitution T-A INTERGENIC HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN1102-S.SNP.8:2915714 chr08:002915714 0 W/2915714-2915714 FN1102-S Single Base Substitution G-A INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN229-S.SNP.8:2920087 chr08:002920087 0 W/2920087-2920087 FN229-S Single Base Substitution C-T INTRON HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN-199.SNP.8:2939322 chr08:002939322 0 W/2939322-2939322 FN-199 Single Base Substitution T-C INTRON HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2445.SNP.8:2949481 chr08:002949481 0 W/2949481-2949481 FN2445 SNP G -> T AC=2;AN=200;BQB=0.364508;DP=3154;DP4=1056,1768,14,10;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000317058;MQB=9.19621e-10;MQSB=0.58323;RPB=0.957093;SGB=104.921;VDB=0.848942;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P195T|359|LOC_Os08g05520|protein_coding|CODING|LOC_Os08g05520.1|3|1) FN568-S.SNP.8:2955496 chr08:002955496 0 W/2955496-2955496 FN568-S Single Base Substitution T-C INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1540-S.SNP.8:2961197 chr08:002961197 0 W/2961197-2961197 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2534-S.SNP.8:2978767 chr08:002978767 0 W/2978767-2978767 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.939743;DP=4402;DP4=1955,2268,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.5509e-08;MQSB=0.886324;RPB=0.844141;SGB=40.149;VDB=0.712113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E138K|491|LOC_Os08g05570|protein_coding|CODING|LOC_Os08g05570.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E138K|491|LOC_Os08g05570|protein_coding|CODING|LOC_Os08g05570.4|4|1),SPLICE_SITE_REGION(LOW||||491|LOC_Os08g05570|protein_coding|CODING|LOC_Os08g05570.3|5|1),SPLICE_SITE_REGION(LOW||||491|LOC_Os08g05570|protein_coding|CODING|LOC_Os08g05570.4|4|1) W7-1-1.SNP.8:2979724 chr08:002979724 0 W/2979724-2979724 W7-1-1 Single Base Substitution C-A INTRON HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. W7-1-1.SNP.8:2979725 chr08:002979725 0 W/2979725-2979725 W7-1-1 Single Base Substitution G-A INTRON HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1674-S.SNP.8:2983294 chr08:002983294 0 W/2983294-2983294 FN1674-S SNP A -> T AC=1;AN=188;BQB=0.119192;DP=3734;DP4=1731,1945,8,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6678e-07;MQSB=0.966683;RPB=0.423173;SGB=-242.703;VDB=0.0919056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.8:2985302 chr08:002985302 0 W/2985302-2985302 FN3998-S SNP C -> T AC=1;AN=168;BQB=0.459904;DP=2666;DP4=1345,1175,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32007e-05;MQSB=0.589257;RPB=0.774925;SGB=24.6155;VDB=0.257102;EFF=INTRON(MODIFIER||||276|LOC_Os08g05580|protein_coding|CODING|LOC_Os08g05580.1|2|1) FN2372.SNP.8:2988189 chr08:002988189 0 W/2988189-2988189 FN2372 SNP G -> C AC=2;AN=192;BQB=0.648575;DP=4889;DP4=2676,1891,42,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.13353e-30;MQSB=0.778739;RPB=0.621811;SGB=134.052;VDB=0.733381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.8:2990748 chr08:002990748 0 W/2990748-2990748 FN3661-S SNP A -> T AC=1;AN=190;BQB=0.689983;DP=3246;DP4=1559,1589,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95399e-06;MQSB=0.975472;RPB=0.885891;SGB=18.552;VDB=0.644969;EFF=INTRON(MODIFIER||||305|LOC_Os08g05590|protein_coding|CODING|LOC_Os08g05590.1|3|1) FN571-S.SNP.8:2995225 chr08:002995225 0 W/2995225-2995225 FN571-S Single Base Substitution C-T INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1745-S.SNP.8:3005367 chr08:003005367 0 W/3005367-3005367 FN1745-S SNP A -> G AC=2;AN=188;BQB=0.999835;DP=2358;DP4=1472,838,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.35844e-08;MQSB=0.999418;RPB=0.710416;SGB=10.1681;VDB=0.460657;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.8:3005370 chr08:003005370 0 W/3005370-3005370 W42-1-3S-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1269-S.SNP.8:3011811 chr08:003011811 0 W/3011811-3011811 FN1269-S Single Base Substitution C-T INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. CW-631-3-1.SNP.8:3015480 chr08:003015480 0 W/3015480-3015480 CW-631-3-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g05640 DUF1336 domain containing protein, expressed SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2096-S.SNP.8:3016737 chr08:003016737 0 W/3016737-3016737 FN2096-S SNP G -> A AC=1;AN=168;BQB=0.260964;DP=2718;DP4=1102,1580,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.27646e-07;MQSB=0.968248;RPB=0.967893;SGB=-98.0622;VDB=0.992732;EFF=INTERGENIC(MODIFIER||||||||||1) 705-1.SNP.8:3016974 chr08:003016974 0 W/3016974-3016974 705-1 Single Base Substitution T-C INTERGENIC Homo SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-3.SNP.8:3016974 chr08:003016974 0 W/3016974-3016974 705-3 Single Base Substitution T-C INTERGENIC HET SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. FN2541-S.SNP.8:3027672 chr08:003027672 0 W/3027672-3027672 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.993696;DP=3628;DP4=1713,1743,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.21887e-13;MQSB=0.990263;RPB=0.966561;SGB=-10.8602;VDB=0.760788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.8:3029507 chr08:003029507 0 W/3029507-3029507 FN3515-S SNP A -> C AC=1;AN=188;BQB=0.990828;DP=2560;DP4=1128,1368,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30421e-05;MQSB=0.972449;RPB=0.996398;SGB=39.8925;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.8:3030420 chr08:003030420 0 W/3030420-3030420 FN713-S Single Base Substitution G-A INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN302-S.SNP.8:3047703 chr08:003047703 0 W/3047703-3047703 FN302-S Single Base Substitution A-T INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN1687-S.SNP.8:3048443 chr08:003048443 0 W/3048443-3048443 FN1687-S SNP C -> G AC=1;AN=188;BQB=0.866059;DP=3845;DP4=2026,1777,20,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.15228e-15;MQSB=0.99152;RPB=0.884511;SGB=54.0524;VDB=0.292057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.8:3055711 chr08:003055711 0 W/3055711-3055711 FN-81 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g05690 ABC transporter, ATP-binding protein, putative, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN-81.SNP.8:3055712 chr08:003055712 0 W/3055712-3055712 FN-81 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g05690 ABC transporter, ATP-binding protein, putative, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN2577-S.SNP.8:3066261 chr08:003066261 0 W/3066261-3066261 FN2577-S SNP G -> C AC=1;AN=198;BQB=0.561912;DP=4226;DP4=2002,2027,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.74118e-06;MQSB=0.982146;RPB=0.377489;SGB=22.1736;VDB=0.288493;EFF=SPLICE_SITE_DONOR(HIGH||||1242|LOC_Os08g05710|protein_coding|CODING|LOC_Os08g05710.1|9|1),INTRON(MODIFIER||||1242|LOC_Os08g05710|protein_coding|CODING|LOC_Os08g05710.1|9|1);LOF=(LOC_Os08g05710|LOC_Os08g05710|1|1.00) FN919-S.SNP.8:3072523 chr08:003072523 0 W/3072523-3072523 FN919-S Single Base Substitution A-G INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN669-S.SNP.8:3073656 chr08:003073656 0 W/3073656-3073656 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1543-S.SNP.8:3076436 chr08:003076436 0 W/3076436-3076436 FN1543-S Single Base Substitution A-G INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN984-S.SNP.8:3077566 chr08:003077566 0 W/3077566-3077566 FN984-S Single Base Substitution A-C INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN548-S.SNP.8:3082543 chr08:003082543 0 W/3082543-3082543 FN548-S Single Base Substitution C-A INTRON HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN989-S.SNP.8:3092622 chr08:003092622 0 W/3092622-3092622 FN989-S Single Base Substitution C-T INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2589-S.SNP.8:3094516 chr08:003094516 0 W/3094516-3094516 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.839002;DP=3870;DP4=1901,1715,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.40715e-10;MQSB=0.374556;RPB=0.456607;SGB=72.5245;VDB=0.666532;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A97V|276|LOC_Os08g05780|protein_coding|CODING|LOC_Os08g05780.1|1|1) FN3513-S.SNP.8:3101143 chr08:003101143 0 W/3101143-3101143 FN3513-S SNP C -> T AC=1;AN=188;BQB=0.839429;DP=2910;DP4=1726,1110,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.77834e-09;MQSB=0.940662;RPB=0.331351;SGB=71.6954;VDB=0.396728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.8:3108106 chr08:003108106 0 W/3108106-3108106 FN1532-S Single Base Substitution G-T INTERGENIC Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3529-S.SNP.8:3110922 chr08:003110922 0 W/3110922-3110922 FN3529-S SNP A -> G AC=1;AN=188;BQB=0.99271;DP=2848;DP4=1370,1306,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.88606e-07;MQSB=0.914966;RPB=0.941124;SGB=32.441;VDB=0.580613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K676R|1141|LOC_Os08g05800|protein_coding|CODING|LOC_Os08g05800.1|1|1) FN1018-S.SNP.8:3117407 chr08:003117407 0 W/3117407-3117407 FN1018-S Single Base Substitution C-T INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1119-S.SNP.8:3126046 chr08:003126046 0 W/3126046-3126046 FN1119-S Single Base Substitution C-G INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3848-S.SNP.8:3127353 chr08:003127353 0 W/3127353-3127353 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.941334;DP=2141;DP4=1000,1026,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.24618e-07;MQSB=0.980739;RPB=0.534375;SGB=27.3346;VDB=0.361713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.8:3129017 chr08:003129017 0 W/3129017-3129017 FN1217-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2704-S.SNP.8:3132034 chr08:003132034 0 W/3132034-3132034 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.935061;DP=4317;DP4=2034,2046,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.33726e-08;MQSB=0.797017;RPB=0.800192;SGB=49.6594;VDB=0.328773;EFF=UTR_5_PRIME(MODIFIER||71||204|LOC_Os08g05830|protein_coding|CODING|LOC_Os08g05830.4|1|1),INTRON(MODIFIER||||399|LOC_Os08g05830|protein_coding|CODING|LOC_Os08g05830.1|1|1),INTRON(MODIFIER||||232|LOC_Os08g05830|protein_coding|CODING|LOC_Os08g05830.2|1|1),INTRON(MODIFIER||||232|LOC_Os08g05830|protein_coding|CODING|LOC_Os08g05830.3|1|1) FN-374.SNP.8:3141128 chr08:003141128 0 W/3141128-3141128 FN-374 Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN424-S.SNP.8:3153453 chr08:003153453 0 W/3153453-3153453 FN424-S Single Base Substitution C-T INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN-208.SNP.8:3154270 chr08:003154270 0 W/3154270-3154270 FN-208 Single Base Substitution G-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN2792-S.SNP.8:3154714 chr08:003154714 0 W/3154714-3154714 FN2792-S SNP T -> A AC=2;AN=198;BQB=0.364323;DP=4256;DP4=1985,2070,21,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.09647e-22;MQSB=0.658851;RPB=0.966561;SGB=126.432;VDB=0.754247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.8:3155910 chr08:003155910 0 W/3155910-3155910 FN2438 SNP T -> G AC=2;AN=200;BQB=0.749022;DP=4997;DP4=2456,2251,30,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.43299e-30;MQSB=0.991044;RPB=0.919593;SGB=238.471;VDB=0.0210727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.8:3161529 chr08:003161529 0 W/3161529-3161529 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.993538;DP=3982;DP4=1913,1860,22,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.75494e-24;MQSB=0.968922;RPB=0.831679;SGB=144.408;VDB=0.928011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S66F|530|LOC_Os08g05870|protein_coding|CODING|LOC_Os08g05870.1|2|1) FN2794-S.SNP.8:3162053 chr08:003162053 0 W/3162053-3162053 FN2794-S SNP A -> C AC=1;AN=198;BQB=0.780553;DP=4036;DP4=1844,2002,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.59926e-10;MQSB=0.909032;RPB=0.931909;SGB=67.9293;VDB=0.252016;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K154Q|530|LOC_Os08g05870|protein_coding|CODING|LOC_Os08g05870.1|3|1) FN3440-S.SNP.8:3163209 chr08:003163209 0 W/3163209-3163209 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.992857;DP=2503;DP4=1028,1388,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.86864e-12;MQSB=0.904889;RPB=0.777136;SGB=70.9657;VDB=0.198573;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F308|530|LOC_Os08g05870|protein_coding|CODING|LOC_Os08g05870.1|5|1) FN4088-S.SNP.8:3165596 chr08:003165596 0 W/3165596-3165596 FN4088-S SNP A -> G AC=2;AN=182;BQB=0.999443;DP=2777;DP4=1599,1093,20,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.19332e-18;MQSB=0.977081;RPB=0.980691;SGB=125.307;VDB=0.669806;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.8:3165698 chr08:003165698 0 W/3165698-3165698 FN229-S Single Base Substitution T-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN229-S.SNP.8:3165699 chr08:003165699 0 W/3165699-3165699 FN229-S Single Base Substitution T-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2481.SNP.8:3170651 chr08:003170651 0 W/3170651-3170651 FN2481 SNP G -> T AC=1;AN=200;BQB=0.755513;DP=4055;DP4=1734,1965,6,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000246609;MQB=6.14685e-05;MQSB=0.0219533;RPB=0.694327;SGB=22.2439;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.8:3175854 chr08:003175854 0 W/3175854-3175854 FN-131 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g05900 expressed protein SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3444-S.SNP.8:3177185 chr08:003177185 0 W/3177185-3177185 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.951447;DP=2822;DP4=1584,1161,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.73872e-09;MQSB=0.866768;RPB=0.790882;SGB=57.786;VDB=0.125465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.8:3178838 chr08:003178838 0 W/3178838-3178838 FN2327 SNP T -> C AC=1;AN=192;BQB=0.704521;DP=5203;DP4=2486,2418,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00057659;MQB=3.09764e-05;MQSB=0.0112738;RPB=0.405381;SGB=21.2209;VDB=0.429384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.8:3191235 chr08:003191235 0 W/3191235-3191235 FN2249-S SNP C -> G AC=1;AN=190;BQB=0.0655356;DP=4682;DP4=2314,2052,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80329e-10;MQSB=0.994823;RPB=0.53287;SGB=11.8805;VDB=0.559358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.8:3193747 chr08:003193747 0 W/3193747-3193747 FN1320-S Single Base Substitution G-A INTRON HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN4272-S.SNP.8:3200510 chr08:003200510 0 W/3200510-3200510 FN4272-S SNP A -> C AC=1;AN=170;BQB=0.99906;DP=2579;DP4=1184,1265,15,15;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00697945;MQB=1.08365e-09;MQSB=0.00231162;RPB=0.585081;SGB=93.4031;VDB=0.893482;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aGt|I1502S|1863|LOC_Os08g05930|protein_coding|CODING|LOC_Os08g05930.1|2|1) FN797-S.SNP.8:3209054 chr08:003209054 0 W/3209054-3209054 FN797-S Single Base Substitution G-C INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1236-S.SNP.8:3214494 chr08:003214494 0 W/3214494-3214494 FN1236-S Single Base Substitution C-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2742-S.SNP.8:3216256 chr08:003216256 0 W/3216256-3216256 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.0656236;DP=4268;DP4=1871,2171,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90273e-07;MQSB=0.881265;RPB=0.853307;SGB=24.2746;VDB=0.525709;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.8:3218678 chr08:003218678 0 W/3218678-3218678 FN-102 Single Base Substitution A-G INTERGENIC HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1716-S.SNP.8:3222971 chr08:003222971 0 W/3222971-3222971 FN1716-S SNP A -> G AC=1;AN=188;BQB=0.0724636;DP=3821;DP4=2019,1760,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.88964e-12;MQSB=0.91981;RPB=0.990368;SGB=-39.6481;VDB=0.647979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.8:3225183 chr08:003225183 0 W/3225183-3225183 FN2634-S SNP T -> C AC=1;AN=200;BQB=0.667964;DP=4618;DP4=2392,2053,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25609e-16;MQSB=0.942394;RPB=0.551119;SGB=79.9264;VDB=0.261442;EFF=INTRON(MODIFIER||||661|LOC_Os08g05940|protein_coding|CODING|LOC_Os08g05940.1|3|1) FN2178-S.SNP.8:3228899 chr08:003228899 0 W/3228899-3228899 FN2178-S SNP T -> A AC=1;AN=168;BQB=0.439411;DP=7012;DP4=3233,3697,20,33;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.34981e-18;MQSB=0.999438;RPB=0.669914;SGB=-57.7188;VDB=0.461725;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.8:3240479 chr08:003240479 0 W/3240479-3240479 FN3808-S SNP G -> C AC=1;AN=190;BQB=0.976931;DP=2972;DP4=1311,1536,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000431761;MQSB=1.16266e-11;RPB=0.890238;SGB=32.5467;VDB=0.150847;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.8:3240771 chr08:003240771 0 W/3240771-3240771 FN4124-S SNP C -> G AC=1;AN=182;BQB=0.972299;DP=2895;DP4=1298,1515,10,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000345423;MQB=7.10573e-11;MQSB=0.424802;RPB=0.645181;SGB=60.2037;VDB=0.972745;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.8:3243433 chr08:003243433 0 W/3243433-3243433 FN990-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2282.SNP.8:3253227 chr08:003253227 0 W/3253227-3253227 FN2282 SNP G -> C AC=1;AN=192;BQB=0.999938;DP=4665;DP4=2144,2267,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.20901e-08;MQSB=0.349717;RPB=0.187036;SGB=-13.64;VDB=0.163813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.8:3259564 chr08:003259564 0 W/3259564-3259564 FN1220-S Single Base Substitution T-C INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN3323-S.SNP.8:3263539 chr08:003263539 0 W/3263539-3263539 FN3323-S SNP T -> C AC=1;AN=184;BQB=0.991912;DP=2970;DP4=1219,1596,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.87082e-09;MQSB=0.990349;RPB=0.849741;SGB=46.3132;VDB=0.381616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.8:3266468 chr08:003266468 0 W/3266468-3266468 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.989781;DP=4921;DP4=2014,2675,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.3788e-08;MQSB=0.98466;RPB=0.734398;SGB=33.0593;VDB=0.990248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.8:3268059 chr08:003268059 0 W/3268059-3268059 FN2375 SNP C -> A AC=1;AN=192;BQB=0.999812;DP=5014;DP4=2549,2133,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.11376e-10;MQSB=0.869784;RPB=0.906913;SGB=36.607;VDB=0.862937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.8:3269604 chr08:003269604 0 W/3269604-3269604 FN1058-S Single Base Substitution T-A INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3518-S.SNP.8:3271682 chr08:003271682 0 W/3271682-3271682 FN3518-S SNP T -> A AC=1;AN=188;BQB=0.663715;DP=2843;DP4=1346,1370,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000703482;MQB=3.78645e-08;MQSB=0.987346;RPB=0.937557;SGB=11.7114;VDB=0.507446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.8:3272385 chr08:003272385 0 W/3272385-3272385 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN4241-S.SNP.8:3273180 chr08:003273180 0 W/3273180-3273180 FN4241-S SNP T -> C AC=1;AN=170;BQB=0.993484;DP=2234;DP4=1040,1080,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00179051;MQB=6.28467e-11;MQSB=0.997314;RPB=0.266794;SGB=39.4251;VDB=0.805963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.8:3282500 chr08:003282500 0 W/3282500-3282500 FN1204-S Single Base Substitution T-G STOP_GAINED HET LOC_Os08g06010 transporter, major facilitator family, putative, expressed SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2568-S.SNP.8:3287029 chr08:003287029 0 W/3287029-3287029 FN2568-S SNP A -> G AC=1;AN=198;BQB=0.993523;DP=4440;DP4=1976,2136,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.12815e-06;MQSB=0.969405;RPB=0.819933;SGB=11.1786;VDB=0.748814;EFF=INTRON(MODIFIER||||243|LOC_Os08g06020|protein_coding|CODING|LOC_Os08g06020.1|7|1) FN691-S.SNP.8:3292822 chr08:003292822 0 W/3292822-3292822 FN691-S Single Base Substitution C-T INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3539-S.SNP.8:3301250 chr08:003301250 0 W/3301250-3301250 FN3539-S SNP T -> C AC=2;AN=188;BQB=0.970791;DP=2672;DP4=1243,1353,8,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.18489e-10;MQSB=0.987524;RPB=0.785658;SGB=76.2387;VDB=0.722594;EFF=UTR_3_PRIME(MODIFIER||224||385|LOC_Os08g06050|protein_coding|CODING|LOC_Os08g06050.1|10|1) FN3595-S.SNP.8:3301250 chr08:003301250 0 W/3301250-3301250 FN3595-S SNP T -> C AC=2;AN=190;BQB=0.930462;DP=3037;DP4=1370,1550,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.55628e-14;MQSB=0.885041;RPB=0.986353;SGB=94.6341;VDB=0.124308;EFF=UTR_3_PRIME(MODIFIER||224||385|LOC_Os08g06050|protein_coding|CODING|LOC_Os08g06050.1|10|1) FN815-S.SNP.8:3305710 chr08:003305710 0 W/3305710-3305710 FN815-S Single Base Substitution C-G INTERGENIC HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN2215-S.SNP.8:3310558 chr08:003310558 0 W/3310558-3310558 FN2215-S SNP C -> T AC=2;AN=190;BQB=0.801143;DP=4736;DP4=2347,2120,24,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000211149;MQB=3.13327e-24;MQSB=0.931676;RPB=0.779422;SGB=142.717;VDB=0.762885;EFF=UTR_3_PRIME(MODIFIER||395||394|LOC_Os08g06060|protein_coding|CODING|LOC_Os08g06060.1|6|1) FN2350.SNP.8:3320666 chr08:003320666 0 W/3320666-3320666 FN2350 SNP T -> C AC=1;AN=192;BQB=0.77669;DP=5286;DP4=2535,2465,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.23078e-08;MQSB=0.687767;RPB=0.942594;SGB=36.2157;VDB=0.819708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.8:3324647 chr08:003324647 0 W/3324647-3324647 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.4834;DP=5124;DP4=2511,2372,21,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.58137e-24;MQSB=0.995555;RPB=0.974224;SGB=86.7987;VDB=0.374101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.8:3325507 chr08:003325507 0 W/3325507-3325507 FN2134-S SNP T -> C AC=2;AN=168;BQB=0.274026;DP=4247;DP4=2265,1881,33,44;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.66861e-32;MQSB=0.844278;RPB=0.0892796;SGB=-13.0129;VDB=0.0681001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.8:3325867 chr08:003325867 0 W/3325867-3325867 FN1154-S Single Base Substitution T-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1680-S.SNP.8:3327053 chr08:003327053 0 W/3327053-3327053 FN1680-S SNP A -> G AC=2;AN=188;BQB=0.167383;DP=1366;DP4=501,792,5,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.33149e-05;MQSB=0.960899;RPB=0.871343;SGB=15.903;VDB=0.293096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cCc|L148P|176|LOC_Os08g06090|protein_coding|CODING|LOC_Os08g06090.1|1|1) FN1680-S.SNP.8:3327057 chr08:003327057 0 W/3327057-3327057 FN1680-S SNP G -> A AC=2;AN=188;BQB=0.10785;DP=1364;DP4=507,795,5,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.64774e-06;MQSB=0.962961;RPB=0.886596;SGB=15.903;VDB=0.574021;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P147S|176|LOC_Os08g06090|protein_coding|CODING|LOC_Os08g06090.1|1|1) FN2758-S.SNP.8:3336764 chr08:003336764 0 W/3336764-3336764 FN2758-S SNP T -> A AC=1;AN=200;BQB=0.01865;DP=3917;DP4=1937,1649,16,7;HOB=5e-05;ICB=0.0001005;MQ=10;MQ0F=0.432729;MQB=0.00747966;MQSB=0;RPB=0.117296;SGB=-65.2847;VDB=0.385979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.8:3338215 chr08:003338215 0 W/3338215-3338215 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.85627;DP=4498;DP4=2137,2090,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222321;MQB=1.0209e-14;MQSB=0.983694;RPB=0.359079;SGB=76.3213;VDB=0.663282;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A311V|368|LOC_Os08g06100|protein_coding|CODING|LOC_Os08g06100.1|2|1) FN2649-S.SNP.8:3338216 chr08:003338216 0 W/3338216-3338216 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.964798;DP=4498;DP4=2214,2027,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222321;MQB=1.08542e-14;MQSB=0.977757;RPB=0.202526;SGB=95.7111;VDB=0.510854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A311S|368|LOC_Os08g06100|protein_coding|CODING|LOC_Os08g06100.1|2|1) FN2692-S.SNP.8:3338955 chr08:003338955 0 W/3338955-3338955 FN2692-S SNP T -> A AC=1;AN=200;BQB=0.845689;DP=5244;DP4=2585,2461,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13563e-07;MQSB=0.996264;RPB=0.860721;SGB=19.0642;VDB=0.735684;EFF=INTRON(MODIFIER||||368|LOC_Os08g06100|protein_coding|CODING|LOC_Os08g06100.1|1|1) FN441-S.SNP.8:3343153 chr08:003343153 0 W/3343153-3343153 FN441-S Single Base Substitution T-A INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1099-S.SNP.8:3346181 chr08:003346181 0 W/3346181-3346181 FN1099-S Single Base Substitution A-G INTERGENIC HOMO SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN561-S.SNP.8:3346894 chr08:003346894 0 W/3346894-3346894 FN561-S Single Base Substitution C-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN-273.SNP.8:3348538 chr08:003348538 0 W/3348538-3348538 FN-273 Single Base Substitution T-G INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN630-S.SNP.8:3348840 chr08:003348840 0 W/3348840-3348840 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN868-S.SNP.8:3353335 chr08:003353335 0 W/3353335-3353335 FN868-S Single Base Substitution G-A INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1033-S.SNP.8:3354782 chr08:003354782 0 W/3354782-3354782 FN1033-S Single Base Substitution A-G INTERGENIC HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4050-S.SNP.8:3363762 chr08:003363762 0 W/3363762-3363762 FN4050-S SNP G -> T AC=2;AN=168;BQB=0.335161;DP=2705;DP4=1378,1179,14,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.3409e-16;MQSB=0.935086;RPB=0.302436;SGB=79.3486;VDB=0.760385;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.8:3363763 chr08:003363763 0 W/3363763-3363763 FN4050-S SNP A -> T AC=2;AN=168;BQB=0.775006;DP=2717;DP4=1403,1204,17,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.73671e-17;MQSB=0.8866;RPB=0.327206;SGB=93.0718;VDB=0.811238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.8:3365193 chr08:003365193 0 W/3365193-3365193 FN2682-S SNP A -> G AC=2;AN=200;BQB=0.989726;DP=5240;DP4=2465,2538,13,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.74607e-19;MQSB=0.966603;RPB=0.588463;SGB=68.5625;VDB=0.162379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.8:3369910 chr08:003369910 0 W/3369910-3369910 FN3679-S SNP T -> G AC=1;AN=190;BQB=0.950146;DP=3142;DP4=1410,1501,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15293e-08;MQSB=0.997923;RPB=0.640435;SGB=50.3161;VDB=0.462835;EFF=INTRON(MODIFIER||||719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.2|5|1),INTRON(MODIFIER||||719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.3|5|1),INTRON(MODIFIER||||719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.4|4|1),INTRON(MODIFIER||||719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.5|4|1) FN2685-S.SNP.8:3371451 chr08:003371451 0 W/3371451-3371451 FN2685-S SNP C -> A AC=1;AN=200;BQB=0.997048;DP=4951;DP4=2395,2303,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29221e-13;MQSB=0.989997;RPB=0.961849;SGB=91.1059;VDB=0.736693;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V195|719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V195|719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.3|7|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V195|719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.4|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V195|719|LOC_Os08g06110|protein_coding|CODING|LOC_Os08g06110.5|6|1) FN4142-S.SNP.8:3374949 chr08:003374949 0 W/3374949-3374949 FN4142-S SNP C -> T AC=1;AN=170;BQB=0.925955;DP=2649;DP4=1246,1310,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.74161e-11;MQSB=0.9837;RPB=0.975873;SGB=62.4192;VDB=0.0258808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.8:3380733 chr08:003380733 0 W/3380733-3380733 FN3455-S SNP T -> C AC=2;AN=184;BQB=0.704116;DP=2032;DP4=1141,797,8,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.85442e-14;MQSB=0.891785;RPB=0.992633;SGB=93.9603;VDB=0.961213;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.8:3384582 chr08:003384582 0 W/3384582-3384582 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.209259;DP=5285;DP4=2683,2387,10,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78727e-16;MQSB=0.701928;RPB=0.599153;SGB=-40.8432;VDB=0.133097;EFF=INTRON(MODIFIER||||718|LOC_Os08g06130|protein_coding|CODING|LOC_Os08g06130.1|3|1) FN3987-S.SNP.8:3386914 chr08:003386914 0 W/3386914-3386914 FN3987-S SNP G -> A AC=1;AN=168;BQB=0.984934;DP=2000;DP4=1001,898,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.47005e-08;MQSB=0.0832442;RPB=0.650566;SGB=41.6096;VDB=0.0563776;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A8|718|LOC_Os08g06130|protein_coding|CODING|LOC_Os08g06130.1|1|1) FN2201-S.SNP.8:3389566 chr08:003389566 0 W/3389566-3389566 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.904586;DP=4621;DP4=2125,2250,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20454e-09;MQSB=0.997316;RPB=0.619957;SGB=33.8752;VDB=0.647379;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W724*|725|LOC_Os08g06140|protein_coding|CODING|LOC_Os08g06140.3|7|1),STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W728*|729|LOC_Os08g06140|protein_coding|CODING|LOC_Os08g06140.2|7|1),STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W729*|730|LOC_Os08g06140|protein_coding|CODING|LOC_Os08g06140.1|7|1) FN553-S.SNP.8:3396154 chr08:003396154 0 W/3396154-3396154 FN553-S Single Base Substitution T-A INTERGENIC HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2173-S.SNP.8:3396538 chr08:003396538 0 W/3396538-3396538 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.969831;DP=2826;DP4=1403,1356,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.62446e-10;MQSB=0.993426;RPB=0.130574;SGB=36.7696;VDB=0.418503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.8:3402676 chr08:003402676 0 W/3402676-3402676 FN1751-S SNP T -> G AC=2;AN=188;BQB=0.714937;DP=3431;DP4=1791,1578,17,15;HOB=0.0210502;ICB=0.494738;MQ=25;MQ0F=0.250073;MQB=0.97668;MQSB=8.10608e-32;RPB=0.343726;SGB=-6.30704;VDB=0.495636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.8:3403977 chr08:003403977 0 W/3403977-3403977 FN2173-S SNP G -> T AC=1;AN=168;BQB=0.307765;DP=3049;DP4=1184,1835,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0147589;MQB=0.00118616;MQSB=4.11288e-19;RPB=0.711599;SGB=-68.0681;VDB=0.11791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.8:3403978 chr08:003403978 0 W/3403978-3403978 FN2173-S SNP G -> T AC=1;AN=168;BQB=0.970277;DP=3039;DP4=1185,1830,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0157947;MQB=0.0184286;MQSB=4.79533e-21;RPB=0.847489;SGB=9.91396;VDB=0.145066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.8:3412061 chr08:003412061 0 W/3412061-3412061 FN2335 SNP G -> A AC=1;AN=192;BQB=0.696558;DP=5125;DP4=2558,2279,19,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.2822e-16;MQSB=0.314686;RPB=0.121894;SGB=-43.1695;VDB=0.418936;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.8:3422789 chr08:003422789 0 W/3422789-3422789 FN4032-S SNP T -> G AC=2;AN=168;BQB=0.921022;DP=2375;DP4=1128,1096,21,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.44632e-19;MQSB=0.924869;RPB=0.921118;SGB=113.657;VDB=0.738528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D186E|377|LOC_Os08g06200|protein_coding|CODING|LOC_Os08g06200.1|4|1) FN-194.SNP.8:3424097 chr08:003424097 0 W/3424097-3424097 FN-194 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g06200 stomatin-like protein 2, putative, expressed SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN671-S.SNP.8:3425036 chr08:003425036 0 W/3425036-3425036 FN671-S Single Base Substitution T-C INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2593-S.SNP.8:3425235 chr08:003425235 0 W/3425235-3425235 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.996889;DP=4212;DP4=1977,2035,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.66228e-09;MQSB=0.941986;RPB=0.717105;SGB=47.3393;VDB=0.831558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.8:3426648 chr08:003426648 0 W/3426648-3426648 FN1008-S Single Base Substitution T-C INTRON HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN3836-S.SNP.8:3427277 chr08:003427277 0 W/3427277-3427277 FN3836-S SNP T -> C AC=1;AN=190;BQB=0.632169;DP=2872;DP4=1152,1442,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000925289;MQSB=0.643321;RPB=0.696672;SGB=-17.0991;VDB=0.229729;EFF=INTRON(MODIFIER||||119|LOC_Os08g06210|protein_coding|CODING|LOC_Os08g06210.1|1|1) FN2683-S.SNP.8:3428429 chr08:003428429 0 W/3428429-3428429 FN2683-S SNP T -> A AC=1;AN=200;BQB=0.978961;DP=4823;DP4=2326,2320,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92488e-06;MQSB=0.925977;RPB=0.937514;SGB=45.0543;VDB=0.903505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2546-S.SNP.8:3429022 chr08:003429022 0 W/3429022-3429022 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.665097;DP=4485;DP4=2009,2249,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.09898e-09;MQSB=0.711161;RPB=0.924682;SGB=43.7442;VDB=0.280825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.8:3431886 chr08:003431886 0 W/3431886-3431886 FN1453-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2138-S.SNP.8:3432260 chr08:003432260 0 W/3432260-3432260 FN2138-S SNP G -> A AC=1;AN=168;BQB=5.23265e-09;DP=3329;DP4=1782,1371,8,32;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000113907;MQSB=0.0618264;RPB=0.291252;SGB=-405.718;VDB=0.552612;EFF=UTR_3_PRIME(MODIFIER||570||261|LOC_Os08g06220|protein_coding|CODING|LOC_Os08g06220.1|1|1),UTR_3_PRIME(MODIFIER||142||463|LOC_Os08g06230|protein_coding|CODING|LOC_Os08g06230.1|14|1) FN1326-S.SNP.8:3432290 chr08:003432290 0 W/3432290-3432290 FN1326-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1154-S.SNP.8:3434105 chr08:003434105 0 W/3434105-3434105 FN1154-S Single Base Substitution A-T INTRON HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1757-S.SNP.8:3434395 chr08:003434395 0 W/3434395-3434395 FN1757-S SNP G -> A AC=2;AN=188;BQB=0.993438;DP=4154;DP4=1963,2140,15,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.01351e-14;MQSB=0.988248;RPB=0.438532;SGB=31.7742;VDB=0.525479;EFF=INTRON(MODIFIER||||463|LOC_Os08g06230|protein_coding|CODING|LOC_Os08g06230.1|8|1) FN2279-S.SNP.8:3454627 chr08:003454627 0 W/3454627-3454627 FN2279-S SNP A -> T AC=2;AN=190;BQB=0.920185;DP=4408;DP4=1738,2047,31,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44694e-27;MQSB=0.143711;RPB=0.919387;SGB=120.707;VDB=0.0495221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.8:3456585 chr08:003456585 0 W/3456585-3456585 FN3938-S SNP C -> G AC=2;AN=158;BQB=0.274312;DP=2442;DP4=1246,1077,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.12429e-09;MQSB=0.801329;RPB=0.593463;SGB=38.0354;VDB=0.82429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.8:3456889 chr08:003456889 0 W/3456889-3456889 FN1049-S Single Base Substitution G-T INTERGENIC HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2171-S.SNP.8:3456889 chr08:003456889 0 W/3456889-3456889 FN2171-S SNP G -> T AC=2;AN=168;BQB=0.219121;DP=3291;DP4=1373,1701,19,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.65056e-23;MQSB=2.36867e-07;RPB=0.932117;SGB=-162.292;VDB=0.327301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.8:3456889 chr08:003456889 0 W/3456889-3456889 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.991726;DP=4572;DP4=1768,2490,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.75735e-09;MQSB=5.29261e-08;RPB=0.999851;SGB=39.7248;VDB=0.146325;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.8:3466997 chr08:003466997 0 W/3466997-3466997 FN807-S Single Base Substitution C-A INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3699-S.SNP.8:3467151 chr08:003467151 0 W/3467151-3467151 FN3699-S SNP C -> T AC=2;AN=190;BQB=0.975131;DP=3271;DP4=1493,1547,30,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.87319e-29;MQSB=0.990307;RPB=0.484794;SGB=230.265;VDB=0.392987;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.8:3468961 chr08:003468961 0 W/3468961-3468961 FN_949-1 Single Base Substitution T-C Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1749-S.SNP.8:3469694 chr08:003469694 0 W/3469694-3469694 FN1749-S SNP A -> T AC=1;AN=188;BQB=0.621651;DP=3852;DP4=1799,2007,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.26565e-10;MQSB=0.999755;RPB=0.999818;SGB=-10.6534;VDB=0.447774;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.8:3472037 chr08:003472037 0 W/3472037-3472037 FN4101-S SNP A -> T AC=2;AN=182;BQB=0.740277;DP=3283;DP4=1588,1521,10,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.51032e-14;MQSB=0.744549;RPB=0.550687;SGB=20.2582;VDB=0.619002;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.8:3474006 chr08:003474006 0 W/3474006-3474006 FN-210 Single Base Substitution A-G INTRON HOMO SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3790-S.SNP.8:3474122 chr08:003474122 0 W/3474122-3474122 FN3790-S SNP G -> A AC=2;AN=190;BQB=0.988919;DP=2496;DP4=1283,1090,17,20;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00600962;MQB=1.18708e-10;MQSB=0.00300298;RPB=0.464952;SGB=121.394;VDB=0.737257;EFF=INTRON(MODIFIER||||125|LOC_Os08g06300|protein_coding|CODING|LOC_Os08g06300.1|1|1) FN3650-S.SNP.8:3490996 chr08:003490996 0 W/3490996-3490996 FN3650-S SNP A -> G AC=1;AN=190;BQB=0.69841;DP=2927;DP4=1501,1222,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.33597e-13;MQSB=0.92659;RPB=0.427752;SGB=85.5263;VDB=0.71227;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.8:3492069 chr08:003492069 0 W/3492069-3492069 FN480-S Single Base Substitution T-A INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN2098-S.SNP.8:3494131 chr08:003494131 0 W/3494131-3494131 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.983538;DP=2177;DP4=1089,997,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.92125e-07;MQSB=0.84901;RPB=0.797894;SGB=19.7539;VDB=0.189882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A148V|289|LOC_Os08g06320|protein_coding|CODING|LOC_Os08g06320.1|2|1) FN421-S.SNP.8:3523438 chr08:003523438 0 W/3523438-3523438 FN421-S Single Base Substitution T-C INTRON HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN3773-S.SNP.8:3537677 chr08:003537677 0 W/3537677-3537677 FN3773-S SNP A -> T AC=2;AN=190;BQB=0.827966;DP=2570;DP4=1137,1326,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.50866e-15;MQSB=0.938745;RPB=0.618989;SGB=126.511;VDB=0.948528;EFF=INTERGENIC(MODIFIER||||||||||1) FN1369-S.SNP.8:3558247 chr08:003558247 0 W/3558247-3558247 FN1369-S Single Base Substitution A-G INTERGENIC Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN-379.SNP.8:3560232 chr08:003560232 0 W/3560232-3560232 FN-379 Single Base Substitution C-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN-379.SNP.8:3560233 chr08:003560233 0 W/3560233-3560233 FN-379 Single Base Substitution C-A INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN3658-S.SNP.8:3561721 chr08:003561721 0 W/3561721-3561721 FN3658-S SNP C -> T AC=2;AN=190;BQB=0.61084;DP=3041;DP4=1447,1454,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.6225e-14;MQSB=0.995006;RPB=0.204191;SGB=21.2038;VDB=0.637605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.8:3565373 chr08:003565373 0 W/3565373-3565373 FN2486 SNP A -> T AC=1;AN=200;BQB=0.291621;DP=4736;DP4=2552,1823,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.18059e-13;MQSB=0.951623;RPB=0.095428;SGB=104.921;VDB=0.0149547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.8:3565374 chr08:003565374 0 W/3565374-3565374 FN2486 SNP G -> T AC=1;AN=200;BQB=0.136821;DP=4727;DP4=2601,1899,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.00048e-13;MQSB=0.932493;RPB=0.0572962;SGB=83.5316;VDB=0.0179028;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.8:3574304 chr08:003574304 0 W/3574304-3574304 FN-35 Single Base Substitution C-A INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN-35.SNP.8:3574305 chr08:003574305 0 W/3574305-3574305 FN-35 Single Base Substitution C-A INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN566-S.SNP.8:3588261 chr08:003588261 0 W/3588261-3588261 FN566-S Single Base Substitution C-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN1452-S.SNP.8:3594125 chr08:003594125 0 W/3594125-3594125 FN1452-S Single Base Substitution G-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3387-S.SNP.8:3595828 chr08:003595828 0 W/3595828-3595828 FN3387-S SNP A -> G AC=2;AN=184;BQB=0.931941;DP=2541;DP4=1124,1178,19,13;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.000393546;MQB=2.45588e-17;MQSB=0.345568;RPB=0.687332;SGB=-262.502;VDB=0.579942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.8:3601476 chr08:003601476 0 W/3601476-3601476 FN2692-S SNP C -> T AC=1;AN=200;BQB=0.411453;DP=3272;DP4=1514,1310,7,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00366948;MQSB=1.21646e-18;RPB=0.764327;SGB=-1.74624;VDB=0.953777;EFF=UTR_5_PRIME(MODIFIER||505||389|LOC_Os08g06420|protein_coding|CODING|LOC_Os08g06420.1|1|1),UTR_5_PRIME(MODIFIER||505||347|LOC_Os08g06420|protein_coding|CODING|LOC_Os08g06420.2|1|1) FN2129-S.SNP.8:3604014 chr08:003604014 0 W/3604014-3604014 FN2129-S SNP T -> C AC=1;AN=168;BQB=0.719585;DP=1562;DP4=863,655,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000237604;MQSB=0.983175;RPB=0.535666;SGB=17.5943;VDB=0.878874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.8:3604496 chr08:003604496 0 W/3604496-3604496 FN2486 SNP C -> T AC=1;AN=200;BQB=0.145862;DP=4500;DP4=2365,1813,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.36437e-07;MQSB=0.999883;RPB=0.827904;SGB=26.8797;VDB=0.527988;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.8:3609819 chr08:003609819 0 W/3609819-3609819 FN753-S Single Base Substitution T-A INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN584-S.SNP.8:3627290 chr08:003627290 0 W/3627290-3627290 FN584-S Single Base Substitution G-A INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2146-S.SNP.8:3627515 chr08:003627515 0 W/3627515-3627515 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.00341726;DP=3847;DP4=1853,1924,18,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.89144e-10;MQSB=0.982382;RPB=0.840045;SGB=-118.616;VDB=0.620414;EFF=INTERGENIC(MODIFIER||||||||||1) FN-364.SNP.8:3627848 chr08:003627848 0 W/3627848-3627848 FN-364 Single Base Substitution C-T INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2575-S.SNP.8:3631743 chr08:003631743 0 W/3631743-3631743 FN2575-S SNP T -> C AC=1;AN=198;BQB=0.0328648;DP=4303;DP4=2115,1949,15,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.18562e-17;MQSB=0.854405;RPB=0.358499;SGB=112.051;VDB=0.432388;EFF=INTRON(MODIFIER||||306|LOC_Os08g06470|protein_coding|CODING|LOC_Os08g06470.1|2|1),INTRON(MODIFIER||||268|LOC_Os08g06470|protein_coding|CODING|LOC_Os08g06470.2|2|1) FN796-S.SNP.8:3636888 chr08:003636888 0 W/3636888-3636888 FN796-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g06474 ribosomal protein L13, putative, expressed SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN1250-S.SNP.8:3643199 chr08:003643199 0 W/3643199-3643199 FN1250-S Single Base Substitution A-C INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1264-S.SNP.8:3643535 chr08:003643535 0 W/3643535-3643535 FN1264-S Single Base Substitution C-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1212-S.SNP.8:3645113 chr08:003645113 0 W/3645113-3645113 FN1212-S Single Base Substitution G-A INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN-288.SNP.8:3645799 chr08:003645799 0 W/3645799-3645799 FN-288 Single Base Substitution A-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1116-S.SNP.8:3653379 chr08:003653379 0 W/3653379-3653379 FN1116-S Single Base Substitution G-A INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3561-S.SNP.8:3661018 chr08:003661018 0 W/3661018-3661018 FN3561-S SNP A -> T AC=1;AN=188;BQB=0.782396;DP=3044;DP4=1479,1477,17,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.68719e-12;MQSB=0.985617;RPB=0.0535332;SGB=103.498;VDB=0.775921;EFF=UTR_5_PRIME(MODIFIER||2925||128|LOC_Os08g06478|protein_coding|CODING|LOC_Os08g06478.1|1|1) FN628-S.SNP.8:3662755 chr08:003662755 0 W/3662755-3662755 FN628-S Single Base Substitution T-G INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN_831-4-1.SNP.8:3680077 chr08:003680077 0 W/3680077-3680077 FN_831-4-1 Single Base Substitution C-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN3632-S.SNP.8:3680724 chr08:003680724 0 W/3680724-3680724 FN3632-S SNP A -> C AC=2;AN=190;BQB=0.791695;DP=3131;DP4=1241,1563,14,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.66649e-19;MQSB=0.729889;RPB=0.96569;SGB=114.286;VDB=0.998512;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.8:3681494 chr08:003681494 0 W/3681494-3681494 FN-344 Single Base Substitution G-A INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2274-S.SNP.8:3701036 chr08:003701036 0 W/3701036-3701036 FN2274-S SNP A -> T AC=2;AN=190;BQB=0.700896;DP=4781;DP4=1784,2673,28,53;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.397516;RPB=0.998811;SGB=312.724;VDB=0.0737155;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.8:3709067 chr08:003709067 0 W/3709067-3709067 FN685-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g06570 retrotransposon protein, putative, unclassified, expressed SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2383.SNP.8:3715041 chr08:003715041 0 W/3715041-3715041 FN2383 SNP C -> T AC=1;AN=192;BQB=0.981425;DP=4949;DP4=2428,2114,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.92312e-09;MQSB=0.126888;RPB=0.793327;SGB=46.9087;VDB=0.571893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G980D|1025|LOC_Os08g06580|protein_coding|CODING|LOC_Os08g06580.1|1|1) FN955-S.SNP.8:3716198 chr08:003716198 0 W/3716198-3716198 FN955-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN910-S.SNP.8:3717483 chr08:003717483 0 W/3717483-3717483 FN910-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g06580 retrotransposon protein, putative, unclassified, expressed SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3456-S.SNP.8:3720050 chr08:003720050 0 W/3720050-3720050 FN3456-S SNP G -> C AC=2;AN=184;BQB=0.92189;DP=3432;DP4=1751,1559,16,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.50017e-17;MQSB=0.604516;RPB=0.286548;SGB=112.047;VDB=0.0397417;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.8:3720052 chr08:003720052 0 W/3720052-3720052 FN3456-S SNP T -> A AC=2;AN=184;BQB=0.995484;DP=3427;DP4=1715,1539,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.6001e-18;MQSB=0.73801;RPB=0.0852935;SGB=88.5747;VDB=0.0431032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.8:3720053 chr08:003720053 0 W/3720053-3720053 FN3456-S SNP G -> T AC=2;AN=184;BQB=0.968925;DP=3427;DP4=1759,1538,17,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.42398e-18;MQSB=0.599738;RPB=0.146227;SGB=88.5747;VDB=0.0453694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.8:3720284 chr08:003720284 0 W/3720284-3720284 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.652283;DP=3790;DP4=1646,1776,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000263852;MQB=0.00141997;MQSB=0.98534;RPB=0.710778;SGB=-1.81641;VDB=0.611614;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C9|221|LOC_Os08g06590|protein_coding|CODING|LOC_Os08g06590.1|1|1) W247-2-1.SNP.8:3725989 chr08:003725989 0 W/3725989-3725989 W247-2-1 Single Base Substitution G-A INTRON HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN2223-S.SNP.8:3729749 chr08:003729749 0 W/3729749-3729749 FN2223-S SNP A -> G AC=1;AN=190;BQB=0.086294;DP=5368;DP4=2419,2421,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.06533e-09;MQSB=0.941607;RPB=0.347462;SGB=-39.4473;VDB=0.813068;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.8:3729895 chr08:003729895 0 W/3729895-3729895 FN708-S Single Base Substitution T-G INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1070-S.SNP.8:3736465 chr08:003736465 0 W/3736465-3736465 FN1070-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3824-S.SNP.8:3744232 chr08:003744232 0 W/3744232-3744232 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.520789;DP=2740;DP4=1150,1501,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08021e-08;MQSB=0.9877;RPB=0.420919;SGB=50.3161;VDB=0.504402;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A154T|439|LOC_Os08g06640|protein_coding|CODING|LOC_Os08g06640.1|2|1) FN2781-S.SNP.8:3744851 chr08:003744851 0 W/3744851-3744851 FN2781-S SNP G -> A AC=2;AN=198;BQB=0.806416;DP=3803;DP4=1846,1698,21,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.42884e-24;MQSB=0.487209;RPB=0.719866;SGB=144.408;VDB=0.856257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A335T|439|LOC_Os08g06640|protein_coding|CODING|LOC_Os08g06640.1|3|1) FN2321.SNP.8:3756870 chr08:003756870 0 W/3756870-3756870 FN2321 SNP C -> T AC=1;AN=192;BQB=0.566839;DP=4885;DP4=2548,2047,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000204708;MQB=1.21552e-12;MQSB=0.820591;RPB=0.851785;SGB=67.3792;VDB=0.0862015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.8:3759235 chr08:003759235 0 W/3759235-3759235 FN1438-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g06700 expressed protein SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2218-S.SNP.8:3763188 chr08:003763188 0 W/3763188-3763188 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.951694;DP=5332;DP4=2470,2522,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000187547;MQB=4.75579e-13;MQSB=0.99756;RPB=0.966971;SGB=71.6393;VDB=0.886172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.8:3777108 chr08:003777108 0 W/3777108-3777108 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3332-S.SNP.8:3778483 chr08:003778483 0 W/3778483-3778483 FN3332-S SNP T -> C AC=2;AN=184;BQB=0.982765;DP=3004;DP4=1470,1415,18,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.92213e-18;MQSB=0.961486;RPB=0.96987;SGB=102.662;VDB=0.335173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.8:3783955 chr08:003783955 0 W/3783955-3783955 FN2651-S SNP G -> T AC=1;AN=200;BQB=0.937164;DP=4899;DP4=2197,2452,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.19462e-09;MQSB=0.977436;RPB=0.644958;SGB=58.8698;VDB=0.733658;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.8:3790537 chr08:003790537 0 W/3790537-3790537 FN3532-S SNP A -> T AC=1;AN=188;BQB=0.999897;DP=3158;DP4=1275,1781,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.97514e-09;MQSB=0.962014;RPB=0.97121;SGB=53.7007;VDB=0.994008;EFF=INTRON(MODIFIER||||278|LOC_Os08g06790|protein_coding|CODING|LOC_Os08g06790.1|3|1) FN432-S.SNP.8:3804235 chr08:003804235 0 W/3804235-3804235 FN432-S Single Base Substitution C-T INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-26.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN-26 Single Base Substitution G-A INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN-329.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN-329 Single Base Substitution G-A INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1413-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1430-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN1430-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1529-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN1529-S Single Base Substitution G-A INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1619-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN1619-S Single Base Substitution G-A INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN437-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN437-S Single Base Substitution G-A INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN673-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN673-S Single Base Substitution G-A INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN770-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN770-S Single Base Substitution G-A INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN885-S.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 FN885-S Single Base Substitution G-A INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. W416-6-1.SNP.8:3804896 chr08:003804896 0 W/3804896-3804896 W416-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3650-S.SNP.8:3809120 chr08:003809120 0 W/3809120-3809120 FN3650-S SNP G -> A AC=1;AN=190;BQB=0.816315;DP=2725;DP4=1313,1306,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.122936;MQB=0.566874;MQSB=0.999777;RPB=0.721245;SGB=53.8699;VDB=0.640467;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L992F|1445|LOC_Os08g06820|protein_coding|CODING|LOC_Os08g06820.1|7|1) FN3864-S.SNP.8:3821088 chr08:003821088 0 W/3821088-3821088 FN3864-S SNP G -> T AC=1;AN=158;BQB=0.996483;DP=2011;DP4=1100,814,1,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.42858e-06;MQSB=0.535102;RPB=0.702005;SGB=33.9591;VDB=0.765169;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.8:3821109 chr08:003821109 0 W/3821109-3821109 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.971997;DP=2826;DP4=1434,1240,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.48529e-11;MQSB=0.891043;RPB=0.980432;SGB=35.884;VDB=0.112489;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.8:3821516 chr08:003821516 0 W/3821516-3821516 FN457-S Single Base Substitution C-G INTERGENIC HET SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN1313-S.SNP.8:3821521 chr08:003821521 0 W/3821521-3821521 FN1313-S Single Base Substitution C-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN511-S.SNP.8:3831272 chr08:003831272 0 W/3831272-3831272 FN511-S Single Base Substitution A-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-181.SNP.8:3837447 chr08:003837447 0 W/3837447-3837447 FN-181 Single Base Substitution G-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3471-S.SNP.8:3844620 chr08:003844620 0 W/3844620-3844620 FN3471-S SNP G -> A AC=1;AN=184;BQB=0.84714;DP=3034;DP4=1413,1518,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.71751e-08;MQSB=0.88474;RPB=0.45091;SGB=48.7425;VDB=0.205941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G4S|131|LOC_Os08g06885|protein_coding|CODING|LOC_Os08g06885.1|1|1) FN1032-S.SNP.8:3850020 chr08:003850020 0 W/3850020-3850020 FN1032-S Single Base Substitution G-A INTRON HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3295-S.SNP.8:3850760 chr08:003850760 0 W/3850760-3850760 FN3295-S SNP G -> T AC=1;AN=184;BQB=0.998198;DP=2670;DP4=1210,1396,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.61264e-05;MQSB=0.726421;RPB=0.769359;SGB=30.6558;VDB=0.923055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.8:3872389 chr08:003872389 0 W/3872389-3872389 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.685229;DP=2522;DP4=1332,1084,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0585837;MQSB=0.0333135;RPB=0.999775;SGB=21.8853;VDB=0.650146;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.8:3887433 chr08:003887433 0 W/3887433-3887433 FN404-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g06980 retrotransposon protein, putative, Ty1-copia subclass SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN391-S.SNP.8:3888824 chr08:003888824 0 W/3888824-3888824 FN391-S Single Base Substitution C-T INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2411.SNP.8:3891993 chr08:003891993 0 W/3891993-3891993 FN2411 SNP C -> T AC=1;AN=200;BQB=0.980435;DP=4498;DP4=1830,2389,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222321;MQB=5.4635e-08;MQSB=0.984784;RPB=0.745915;SGB=40.2696;VDB=0.718829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.8:3892541 chr08:003892541 0 W/3892541-3892541 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.796642;DP=2741;DP4=1349,1296,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74754e-07;MQSB=0.926927;RPB=0.986912;SGB=44.5415;VDB=0.176923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.8:3900493 chr08:003900493 0 W/3900493-3900493 FN3343-S SNP C -> T AC=2;AN=184;BQB=0.999409;DP=2978;DP4=1338,1546,16,13;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0453324;MQB=0.0262605;MQSB=4.19485e-09;RPB=0.504399;SGB=92.0965;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.8:3903898 chr08:003903898 0 W/3903898-3903898 FN2119-S SNP A -> G AC=2;AN=168;BQB=0.383722;DP=2921;DP4=1834,1042,25,7;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.19822;MQB=0.431434;MQSB=0;RPB=0.983675;SGB=27.0838;VDB=0.54644;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.8:3910650 chr08:003910650 0 W/3910650-3910650 FN1434-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2289.SNP.8:3921400 chr08:003921400 0 W/3921400-3921400 FN2289 SNP A -> G AC=2;AN=192;BQB=0.522676;DP=4921;DP4=2406,2118,24,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.15208e-23;MQSB=0.294021;RPB=0.970215;SGB=204.398;VDB=0.578436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.8:3923415 chr08:003923415 0 W/3923415-3923415 FN2288 SNP C -> A AC=1;AN=192;BQB=0.728664;DP=5024;DP4=2467,2227,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.28858e-09;MQSB=0.943103;RPB=0.0604366;SGB=54.0374;VDB=0.822108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.8:3924049 chr08:003924049 0 W/3924049-3924049 FN1313-S Single Base Substitution C-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN685-S.SNP.8:3930624 chr08:003930624 0 W/3930624-3930624 FN685-S Single Base Substitution G-A INTRON HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-412.SNP.8:3931671 chr08:003931671 0 W/3931671-3931671 FN-412 Single Base Substitution T-A INTRON HOMO SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN412-S.SNP.8:3931671 chr08:003931671 0 W/3931671-3931671 FN412-S Single Base Substitution T-A INTRON HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3887-S.SNP.8:3939685 chr08:003939685 0 W/3939685-3939685 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.914529;DP=2085;DP4=1097,892,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.09994e-08;MQSB=0.762742;RPB=0.469201;SGB=23.8187;VDB=0.0189026;EFF=INTERGENIC(MODIFIER||||||||||1) FN_827-1.SNP.8:3942020 chr08:003942020 0 W/3942020-3942020 FN_827-1 Single Base Substitution C-T HET LOC_Os08g07040 plant protein of unknown function domain containing protein, expressed SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1556-S.SNP.8:3943340 chr08:003943340 0 W/3943340-3943340 FN1556-S Single Base Substitution C-T INTRON HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN4208-S.SNP.8:3943807 chr08:003943807 0 W/3943807-3943807 FN4208-S SNP T -> C AC=1;AN=170;BQB=0.976752;DP=2397;DP4=1110,1233,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.93811e-07;MQSB=0.98812;RPB=0.85911;SGB=38.987;VDB=0.189841;EFF=INTRON(MODIFIER||||527|LOC_Os08g07040|protein_coding|CODING|LOC_Os08g07040.1|1|1) FN1645-S.SNP.8:3945477 chr08:003945477 0 W/3945477-3945477 FN1645-S Single Base Substitution C-T INTERGENIC Homo SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN780-S.SNP.8:3948926 chr08:003948926 0 W/3948926-3948926 FN780-S Single Base Substitution G-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1102-S.SNP.8:3949232 chr08:003949232 0 W/3949232-3949232 FN1102-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2557-S.SNP.8:3953257 chr08:003953257 0 W/3953257-3953257 FN2557-S SNP C -> T AC=2;AN=198;BQB=0.720461;DP=4445;DP4=1971,2204,12,17;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=2.90603e-12;MQSB=1.57205e-06;RPB=0.381101;SGB=26.8957;VDB=0.352913;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.8:3956391 chr08:003956391 0 W/3956391-3956391 FN-361 Single Base Substitution A-T INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN889-S.SNP.8:3961080 chr08:003961080 0 W/3961080-3961080 FN889-S Single Base Substitution A-T INTRON HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. W360-2S-2.SNP.8:3976600 chr08:003976600 0 W/3976600-3976600 W360-2S-2 Single Base Substitution G-T INTRON HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2333.SNP.8:3977511 chr08:003977511 0 W/3977511-3977511 FN2333 SNP T -> C AC=1;AN=192;BQB=0.941234;DP=5017;DP4=2330,2369,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.71906e-13;MQSB=0.878673;RPB=0.895191;SGB=39.1713;VDB=0.384584;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.8:3979521 chr08:003979521 0 W/3979521-3979521 W360-2S-2 Single Base Substitution A-T INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3613-S.SNP.8:3980215 chr08:003980215 0 W/3980215-3980215 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.948442;DP=1654;DP4=1138,453,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00241838;MQB=8.99839e-06;MQSB=0.817471;RPB=0.822452;SGB=28.9929;VDB=0.453287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.8:3985517 chr08:003985517 0 W/3985517-3985517 FN3947-S SNP C -> T AC=1;AN=168;BQB=0.811224;DP=2619;DP4=1315,1218,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02838e-06;MQSB=0.985959;RPB=0.859068;SGB=56.6036;VDB=0.11079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.8:3989663 chr08:003989663 0 W/3989663-3989663 FN1582-S Single Base Substitution G-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1442-S.SNP.8:3989692 chr08:003989692 0 W/3989692-3989692 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN724-S.SNP.8:3989795 chr08:003989795 0 W/3989795-3989795 FN724-S Single Base Substitution A-C INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3806-S.SNP.8:3997975 chr08:003997975 0 W/3997975-3997975 FN3806-S SNP G -> T AC=2;AN=190;BQB=0.790282;DP=3039;DP4=1155,1701,16,19;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.00756828;MQB=0.0105131;MQSB=4.59849e-07;RPB=0.994731;SGB=114.286;VDB=0.733295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.8:4003237 chr08:004003237 0 W/4003237-4003237 FN3385-S SNP A -> C AC=2;AN=184;BQB=0.671251;DP=3525;DP4=1647,1760,9,16;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.000283688;MQB=1.03559e-08;MQSB=0.889579;RPB=0.329354;SGB=107.526;VDB=0.865741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.8:4008422 chr08:004008422 0 W/4008422-4008422 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.977799;DP=2371;DP4=1667,586,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.30634e-07;MQSB=0.0158666;RPB=0.979609;SGB=6.80232;VDB=0.985588;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.8:4011892 chr08:004011892 0 W/4011892-4011892 FN931-S Single Base Substitution G-A INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3811-S.SNP.8:4019495 chr08:004019495 0 W/4019495-4019495 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.788456;DP=3231;DP4=1618,1509,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.24206e-10;MQSB=0.91814;RPB=0.851829;SGB=57.4238;VDB=0.958386;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q202*|395|LOC_Os08g07200|protein_coding|CODING|LOC_Os08g07200.1|2|1) FN2497.SNP.8:4021169 chr08:004021169 0 W/4021169-4021169 FN2497 SNP A -> G AC=1;AN=200;BQB=0.555866;DP=4930;DP4=2263,2336,7,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.72329e-06;MQSB=0.288277;RPB=0.740092;SGB=35.8441;VDB=0.455044;EFF=INTRON(MODIFIER||||67|LOC_Os08g07210|protein_coding|CODING|LOC_Os08g07210.1|2|1) FN1037-S.SNP.8:4024814 chr08:004024814 0 W/4024814-4024814 FN1037-S Single Base Substitution G-A INTRON HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1470-S.SNP.8:4026983 chr08:004026983 0 W/4026983-4026983 FN1470-S Single Base Substitution C-A INTRON HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1099-S.SNP.8:4028244 chr08:004028244 0 W/4028244-4028244 FN1099-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g07220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN836-S.SNP.8:4035444 chr08:004035444 0 W/4035444-4035444 FN836-S Single Base Substitution A-G INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2349.SNP.8:4041164 chr08:004041164 0 W/4041164-4041164 FN2349 SNP C -> T AC=1;AN=192;BQB=0.396989;DP=4921;DP4=2535,2125,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0213371;MQB=0.00248452;MQSB=1.21697e-12;RPB=0.84423;SGB=22.9983;VDB=0.550074;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.8:4049866 chr08:004049866 0 W/4049866-4049866 FN4083-S SNP G -> A AC=2;AN=182;BQB=0.397889;DP=3194;DP4=1418,1680,24,30;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.80131e-27;MQSB=0.962133;RPB=0.254392;SGB=201.086;VDB=0.95559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.8:4049873 chr08:004049873 0 W/4049873-4049873 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.464269;DP=5022;DP4=2305,2487,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.76558e-10;MQSB=0.998274;RPB=0.774451;SGB=24.2746;VDB=0.731125;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.8:4052128 chr08:004052128 0 W/4052128-4052128 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.995153;DP=2201;DP4=1209,911,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000234029;MQSB=0.732243;RPB=0.390913;SGB=30.1021;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.8:4056670 chr08:004056670 0 W/4056670-4056670 FN-316 Single Base Substitution G-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN738-S.SNP.8:4060390 chr08:004060390 0 W/4060390-4060390 FN738-S Single Base Substitution C-T INTERGENIC HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN3381-S.SNP.8:4061223 chr08:004061223 0 W/4061223-4061223 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.653482;DP=3143;DP4=1387,1636,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46745e-09;MQSB=0.927402;RPB=0.483904;SGB=14.4113;VDB=0.484002;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.8:4062140 chr08:004062140 0 W/4062140-4062140 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN756-S.SNP.8:4062531 chr08:004062531 0 W/4062531-4062531 FN756-S Single Base Substitution T-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN756-S.SNP.8:4062532 chr08:004062532 0 W/4062532-4062532 FN756-S Single Base Substitution T-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2435.SNP.8:4071805 chr08:004071805 0 W/4071805-4071805 FN2435 SNP A -> G AC=1;AN=200;BQB=0.813059;DP=4683;DP4=2234,2196,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33275e-11;MQSB=0.631729;RPB=0.809613;SGB=42.5108;VDB=0.0491637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W1508R|2122|LOC_Os08g07290|protein_coding|CODING|LOC_Os08g07290.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W972R|1586|LOC_Os08g07290|protein_coding|CODING|LOC_Os08g07290.2|4|1) FN4142-S.SNP.8:4073321 chr08:004073321 0 W/4073321-4073321 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.900925;DP=2470;DP4=1115,1289,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.81019e-06;MQSB=0.995227;RPB=0.319974;SGB=7.67082;VDB=0.159195;EFF=INTRON(MODIFIER||||2122|LOC_Os08g07290|protein_coding|CODING|LOC_Os08g07290.1|3|1),INTRON(MODIFIER||||1586|LOC_Os08g07290|protein_coding|CODING|LOC_Os08g07290.2|2|1) FN-316.SNP.8:4075131 chr08:004075131 0 W/4075131-4075131 FN-316 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g07290 HEAT repeat family protein, putative, expressed SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3924-S.SNP.8:4081625 chr08:004081625 0 W/4081625-4081625 FN3924-S SNP G -> T AC=1;AN=158;BQB=0.987852;DP=2685;DP4=1286,1313,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.53394e-10;MQSB=0.99974;RPB=0.993914;SGB=50.9207;VDB=0.544883;EFF=INTRON(MODIFIER||||271|LOC_Os08g07300|protein_coding|CODING|LOC_Os08g07300.1|8|1) FN701-S.SNP.8:4081625 chr08:004081625 0 W/4081625-4081625 FN701-S Single Base Substitution G-T INTRON HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN565-S.SNP.8:4084911 chr08:004084911 0 W/4084911-4084911 FN565-S Single Base Substitution G-A INTRON HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN1124-S.SNP.8:4102973 chr08:004102973 0 W/4102973-4102973 FN1124-S Single Base Substitution A-T INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN4030-S.SNP.8:4102980 chr08:004102980 0 W/4102980-4102980 FN4030-S SNP A -> G AC=1;AN=168;BQB=0.851373;DP=2839;DP4=1646,1034,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.7791e-07;MQSB=0.869196;RPB=0.999965;SGB=31.3172;VDB=0.986487;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.8:4103574 chr08:004103574 0 W/4103574-4103574 FN-305 Single Base Substitution G-C INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1022-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN1022-S Single Base Substitution T-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1627-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN1627-S Single Base Substitution T-C INTERGENIC Homo SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2595-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN2595-S SNP T -> C AC=1;AN=198;BQB=0.261982;DP=4212;DP4=1913,1986,13,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.37356e-10;MQSB=0.976239;RPB=0.900886;SGB=47.3393;VDB=0.305955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN2698-S SNP T -> C AC=1;AN=200;BQB=0.421081;DP=4899;DP4=2333,2258,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.18931e-13;MQSB=0.981292;RPB=0.546779;SGB=91.1059;VDB=0.500216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN3050-S SNP T -> C AC=2;AN=184;BQB=0.992233;DP=3000;DP4=1544,1350,8,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.21218e-09;MQSB=0.884407;RPB=0.78178;SGB=71.3514;VDB=0.63083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.8:4115814 chr08:004115814 0 W/4115814-4115814 FN3495-S SNP T -> C AC=2;AN=188;BQB=0.962525;DP=2886;DP4=1458,1332,23,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.7818e-17;MQSB=0.585002;RPB=0.525485;SGB=130.758;VDB=0.196362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.8:4118833 chr08:004118833 0 W/4118833-4118833 FN1618-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g07360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1080-S.SNP.8:4123060 chr08:004123060 0 W/4123060-4123060 FN1080-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g07360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3310-S.SNP.8:4124019 chr08:004124019 0 W/4124019-4124019 FN3310-S SNP A -> T AC=1;AN=184;BQB=0.725088;DP=1939;DP4=887,911,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0103146;MQB=0.00103567;MQSB=0.879683;RPB=0.894993;SGB=21.6609;VDB=0.692532;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.8:4126063 chr08:004126063 0 W/4126063-4126063 FN580-S Single Base Substitution T-C INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3887-S.SNP.8:4126372 chr08:004126372 0 W/4126372-4126372 FN3887-S SNP T -> A AC=1;AN=158;BQB=0.830057;DP=2222;DP4=848,1257,8,20;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.84861e-13;MQSB=0.910659;RPB=0.74122;SGB=52.2521;VDB=0.286904;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.8:4130343 chr08:004130343 0 W/4130343-4130343 FN487-S Single Base Substitution G-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN3958-S.SNP.8:4138964 chr08:004138964 0 W/4138964-4138964 FN3958-S SNP C -> T AC=1;AN=168;BQB=0.996967;DP=2539;DP4=1379,1065,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.72116e-10;MQSB=0.987811;RPB=0.933176;SGB=83.1885;VDB=0.0267698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R481K|1777|LOC_Os08g07380|protein_coding|CODING|LOC_Os08g07380.1|8|1) FN4071-S.SNP.8:4156808 chr08:004156808 0 W/4156808-4156808 FN4071-S SNP C -> A AC=1;AN=182;BQB=0.992244;DP=3375;DP4=1896,1330,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.01774e-09;MQSB=0.80124;RPB=0.984975;SGB=49.6712;VDB=0.848553;EFF=INTRON(MODIFIER||||731|LOC_Os08g07400|protein_coding|CODING|LOC_Os08g07400.1|1|1) FN3838-S.SNP.8:4162163 chr08:004162163 0 W/4162163-4162163 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.953861;DP=2764;DP4=1389,1302,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.231548;MQB=0.395339;MQSB=1.04432e-36;RPB=0.976822;SGB=62.7569;VDB=0.368145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S779Y|1101|LOC_Os08g07410|protein_coding|CODING|LOC_Os08g07410.1|1|1) FN3345-S.SNP.8:4162859 chr08:004162859 0 W/4162859-4162859 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.978086;DP=4090;DP4=1936,2049,12,14;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0867971;MQB=0.0536176;MQSB=0.040918;RPB=0.999928;SGB=-10.0179;VDB=0.312978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S1011L|1101|LOC_Os08g07410|protein_coding|CODING|LOC_Os08g07410.1|1|1) FN3836-S.SNP.8:4174682 chr08:004174682 0 W/4174682-4174682 FN3836-S SNP C -> T AC=1;AN=190;BQB=0.677711;DP=2773;DP4=1352,1322,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27974e-06;MQSB=0.924774;RPB=0.3468;SGB=21.8853;VDB=0.95991;EFF=INTRON(MODIFIER||||323|LOC_Os08g07430|protein_coding|CODING|LOC_Os08g07430.1|8|1) FN3849-S.SNP.8:4177191 chr08:004177191 0 W/4177191-4177191 FN3849-S SNP T -> A AC=2;AN=158;BQB=0.599297;DP=2364;DP4=1146,1081,17,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.5179e-15;MQSB=0.865682;RPB=0.85483;SGB=143.195;VDB=0.15998;EFF=INTRON(MODIFIER||||157|LOC_Os08g07440|protein_coding|CODING|LOC_Os08g07440.1|2|1) FN1466-S.SNP.8:4197182 chr08:004197182 0 W/4197182-4197182 FN1466-S Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os08g07480 DNA-directed RNA polymerase subunit, putative, expressed SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2673-S.SNP.8:4211352 chr08:004211352 0 W/4211352-4211352 FN2673-S SNP T -> A AC=1;AN=200;BQB=0.701816;DP=4547;DP4=2057,2175,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.3488e-08;MQSB=0.998509;RPB=0.183869;SGB=-15.5309;VDB=0.423561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.8:4214358 chr08:004214358 0 W/4214358-4214358 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN927-S.SNP.8:4216060 chr08:004216060 0 W/4216060-4216060 FN927-S Single Base Substitution C-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN452-S.SNP.8:4236687 chr08:004236687 0 W/4236687-4236687 FN452-S Single Base Substitution C-A INTERGENIC HOMO SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN-74.SNP.8:4245982 chr08:004245982 0 W/4245982-4245982 FN-74 Single Base Substitution T-A INTERGENIC HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3554-S.SNP.8:4252693 chr08:004252693 0 W/4252693-4252693 FN3554-S SNP T -> A AC=1;AN=188;BQB=0.911738;DP=2590;DP4=1299,1205,28,15;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.0841699;MQB=3.04912e-11;MQSB=4.20374e-37;RPB=2.88424e-05;SGB=-477.62;VDB=0.36665;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G101|662|LOC_Os08g07560|protein_coding|CODING|LOC_Os08g07560.1|1|1) FN-306.SNP.8:4258686 chr08:004258686 0 W/4258686-4258686 FN-306 Single Base Substitution G-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2328.SNP.8:4262736 chr08:004262736 0 W/4262736-4262736 FN2328 SNP T -> A AC=1;AN=192;BQB=0.0246399;DP=5272;DP4=2307,2740,15,19;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=2.39726e-11;MQSB=0.512774;RPB=0.999429;SGB=72.5078;VDB=0.478509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.8:4262737 chr08:004262737 0 W/4262737-4262737 FN3578-S SNP A -> T AC=1;AN=188;BQB=0.624413;DP=2929;DP4=1261,1605,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=8.67716e-11;MQSB=0.0255387;RPB=0.600164;SGB=60.7873;VDB=0.0733334;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.8:4272857 chr08:004272857 0 W/4272857-4272857 FN1176-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g07610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN923-S.SNP.8:4275199 chr08:004275199 0 W/4275199-4275199 FN923-S Single Base Substitution C-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN3799-S.SNP.8:4279491 chr08:004279491 0 W/4279491-4279491 FN3799-S SNP A -> T AC=1;AN=190;BQB=0.897591;DP=2502;DP4=1402,1008,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=6.97781e-06;MQSB=0.00718625;RPB=0.28007;SGB=25.439;VDB=0.651537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.8:4279491 chr08:004279491 0 W/4279491-4279491 FN3861-S SNP A -> T AC=1;AN=158;BQB=0.564932;DP=2182;DP4=1203,861,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.00103708;MQSB=0.282489;RPB=0.86178;SGB=27.3346;VDB=0.533108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.8:4282380 chr08:004282380 0 W/4282380-4282380 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.983364;DP=4338;DP4=2233,1834,16,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55487e-22;MQSB=0.886993;RPB=0.55398;SGB=126.794;VDB=0.464824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.8:4283407 chr08:004283407 0 W/4283407-4283407 FN1472-S Single Base Substitution C-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN976-S.SNP.8:4286848 chr08:004286848 0 W/4286848-4286848 FN976-S Single Base Substitution A-G INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN2752-S.SNP.8:4288197 chr08:004288197 0 W/4288197-4288197 FN2752-S SNP G -> A AC=2;AN=200;BQB=0.979149;DP=4823;DP4=2368,2153,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.62986e-15;MQSB=0.666045;RPB=0.920164;SGB=97.9523;VDB=0.673136;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.8:4288780 chr08:004288780 0 W/4288780-4288780 FN813-S Single Base Substitution T-C INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1450-S.SNP.8:4289995 chr08:004289995 0 W/4289995-4289995 FN1450-S Single Base Substitution T-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1450-S.SNP.8:4289996 chr08:004289996 0 W/4289996-4289996 FN1450-S Single Base Substitution C-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1674-S.SNP.8:4291613 chr08:004291613 0 W/4291613-4291613 FN1674-S SNP A -> T AC=1;AN=188;BQB=0.608558;DP=4040;DP4=2132,1876,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=6.9662e-07;MQSB=0.727299;RPB=0.987039;SGB=-12.8266;VDB=0.361412;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.8:4295588 chr08:004295588 0 W/4295588-4295588 FN4234-S SNP G -> C AC=1;AN=170;BQB=0.968444;DP=2346;DP4=1051,1221,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.89535e-09;MQSB=0.972702;RPB=0.236009;SGB=38.3207;VDB=0.477402;EFF=INTERGENIC(MODIFIER||||||||||1) FN3571-S.SNP.8:4295637 chr08:004295637 0 W/4295637-4295637 FN3571-S SNP A -> G AC=2;AN=188;BQB=0.99471;DP=2783;DP4=1144,1543,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6121e-17;MQSB=0.997223;RPB=0.693726;SGB=89.1337;VDB=0.918526;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.8:4295690 chr08:004295690 0 W/4295690-4295690 FN391-S Single Base Substitution G-T INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3675-S.SNP.8:4302572 chr08:004302572 0 W/4302572-4302572 FN3675-S SNP A -> G AC=1;AN=190;BQB=0.944855;DP=2818;DP4=1283,1330,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94012e-07;MQSB=0.9186;RPB=0.995298;SGB=43.2083;VDB=0.471439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.8:4305909 chr08:004305909 0 W/4305909-4305909 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.97054;DP=4924;DP4=2170,2373,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22213e-13;MQSB=0.764797;RPB=0.763832;SGB=18.096;VDB=0.693673;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.8:4321861 chr08:004321861 0 W/4321861-4321861 FN-316 Single Base Substitution T-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN2682-S.SNP.8:4331177 chr08:004331177 0 W/4331177-4331177 FN2682-S SNP T -> C AC=2;AN=200;BQB=0.972926;DP=4896;DP4=2315,2383,16,11;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0;MQB=3.15154e-06;MQSB=0.875355;RPB=0.941668;SGB=87.1368;VDB=0.923835;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.8:4338603 chr08:004338603 0 W/4338603-4338603 FN3430-S SNP G -> C AC=2;AN=184;BQB=0.98369;DP=2847;DP4=1241,1445,20,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.65401e-21;MQSB=0.993988;RPB=0.988159;SGB=116.749;VDB=0.588895;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.8:4340161 chr08:004340161 0 W/4340161-4340161 FN403-S Single Base Substitution C-T INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3991-S.SNP.8:4341186 chr08:004341186 0 W/4341186-4341186 FN3991-S SNP G -> A AC=2;AN=168;BQB=0.856192;DP=2425;DP4=1269,1028,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.91944e-12;MQSB=0.992076;RPB=0.837597;SGB=58.7637;VDB=0.576481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.8:4351613 chr08:004351613 0 W/4351613-4351613 FN1339-S Single Base Substitution C-T INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN1022-S.SNP.8:4356173 chr08:004356173 0 W/4356173-4356173 FN1022-S Single Base Substitution A-T INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2278-S.SNP.8:4358787 chr08:004358787 0 W/4358787-4358787 FN2278-S SNP C -> A AC=2;AN=190;BQB=0.848072;DP=4915;DP4=2271,2353,30,39;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.58301e-36;MQSB=0.965918;RPB=0.724524;SGB=308.666;VDB=0.763149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A467D|798|LOC_Os08g07774|protein_coding|CODING|LOC_Os08g07774.1|2|1),UTR_5_PRIME(MODIFIER||53||336|LOC_Os08g07774|protein_coding|CODING|LOC_Os08g07774.2|1|1) FN983-S.SNP.8:4364414 chr08:004364414 0 W/4364414-4364414 FN983-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g07790 CRS2-associated factor 2, mitochondrial precursor, putative, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3667-S.SNP.8:4365469 chr08:004365469 0 W/4365469-4365469 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.998335;DP=3021;DP4=1479,1454,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.44675e-05;MQSB=0.932807;RPB=0.287164;SGB=26.3271;VDB=0.293704;EFF=UTR_3_PRIME(MODIFIER||357||428|LOC_Os08g07790|protein_coding|CODING|LOC_Os08g07790.1|5|1) FN3883-S.SNP.8:4366044 chr08:004366044 0 W/4366044-4366044 FN3883-S SNP T -> G AC=2;AN=158;BQB=0.981845;DP=2218;DP4=1048,1075,10,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.10681e-14;MQSB=0.953214;RPB=0.619813;SGB=52.2521;VDB=0.586158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E28D|53|LOC_Os08g07800|protein_coding|CODING|LOC_Os08g07800.1|2|1) FN2709-S.SNP.8:4366812 chr08:004366812 0 W/4366812-4366812 FN2709-S SNP A -> G AC=1;AN=200;BQB=0.38215;DP=4750;DP4=2405,2151,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40371e-06;MQSB=0.876468;RPB=0.961377;SGB=36.6644;VDB=0.928977;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.8:4386237 chr08:004386237 0 W/4386237-4386237 FN355-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN680-S.SNP.8:4386576 chr08:004386576 0 W/4386576-4386576 FN680-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3630-S.SNP.8:4387107 chr08:004387107 0 W/4387107-4387107 FN3630-S SNP A -> C AC=1;AN=190;BQB=0.990089;DP=2847;DP4=1294,1456,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.16459e-10;MQSB=0.959556;RPB=0.290234;SGB=76.4186;VDB=0.551262;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L215|561|LOC_Os08g07830|protein_coding|CODING|LOC_Os08g07830.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L141|487|LOC_Os08g07830|protein_coding|CODING|LOC_Os08g07830.2|5|1) FN-202.SNP.8:4390024 chr08:004390024 0 W/4390024-4390024 FN-202 Single Base Substitution T-C INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN850-S.SNP.8:4397174 chr08:004397174 0 W/4397174-4397174 FN850-S Single Base Substitution T-A INTRON HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN552-S.SNP.8:4399717 chr08:004399717 0 W/4399717-4399717 FN552-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g07840 PolI-like DNA polymerase, putative, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN-170.SNP.8:4401552 chr08:004401552 0 W/4401552-4401552 FN-170 Single Base Substitution C-A INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN2242-S.SNP.8:4407525 chr08:004407525 0 W/4407525-4407525 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.937118;DP=4618;DP4=2266,2061,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000216544;MQB=1.02649e-06;MQSB=0.292321;RPB=0.724594;SGB=50.3161;VDB=0.915486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W998R|1056|LOC_Os08g07850|protein_coding|CODING|LOC_Os08g07850.1|12|1) W427-1-1.SNP.8:4408446 chr08:004408446 0 W/4408446-4408446 W427-1-1 Single Base Substitution A-G INTRON HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1614-S.SNP.8:4412467 chr08:004412467 0 W/4412467-4412467 FN1614-S Single Base Substitution C-T INTRON Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2619-S.SNP.8:4413572 chr08:004413572 0 W/4413572-4413572 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.7419;DP=4213;DP4=1717,2177,16,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.44741e-13;MQSB=0.635214;RPB=0.194251;SGB=150.641;VDB=0.834693;EFF=INTRON(MODIFIER||||1056|LOC_Os08g07850|protein_coding|CODING|LOC_Os08g07850.1|3|1) FN-288.SNP.8:4413697 chr08:004413697 0 W/4413697-4413697 FN-288 Single Base Substitution T-C INTRON HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN953-S.SNP.8:4421356 chr08:004421356 0 W/4421356-4421356 FN953-S Single Base Substitution C-T INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2713-S.SNP.8:4432325 chr08:004432325 0 W/4432325-4432325 FN2713-S SNP C -> T AC=2;AN=200;BQB=0.951486;DP=5008;DP4=2460,2224,29,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000199681;MQB=1.72832e-32;MQSB=0.955065;RPB=0.126515;SGB=261.497;VDB=0.361712;EFF=INTRON(MODIFIER||||323|LOC_Os08g07880|protein_coding|CODING|LOC_Os08g07880.1|7|1) FN3764-S.SNP.8:4434567 chr08:004434567 0 W/4434567-4434567 FN3764-S SNP T -> A AC=2;AN=190;BQB=0.243644;DP=2405;DP4=1086,1233,4,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.22285e-05;MQSB=0.993849;RPB=0.644037;SGB=32.5467;VDB=0.377547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.8:4437435 chr08:004437435 0 W/4437435-4437435 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.00031363;DP=2702;DP4=1372,803,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0133235;MQB=0.0155914;MQSB=1.60675e-13;RPB=0.397871;SGB=20.7533;VDB=0.324508;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.8:4438822 chr08:004438822 0 W/4438822-4438822 FN4300-S SNP A -> G AC=2;AN=170;BQB=0.981753;DP=2691;DP4=1305,1312,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.13189e-13;MQSB=0.991144;RPB=0.772362;SGB=96.7413;VDB=0.588417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.8:4438843 chr08:004438843 0 W/4438843-4438843 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.916358;DP=4928;DP4=2331,2149,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.93523e-16;MQSB=0.943069;RPB=0.918842;SGB=87.1368;VDB=0.5567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.8:4467658 chr08:004467658 0 W/4467658-4467658 FN3297-S SNP C -> T AC=1;AN=184;BQB=0.967679;DP=3137;DP4=1323,1649,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.83703e-12;MQSB=0.984352;RPB=0.732814;SGB=11.3677;VDB=0.662765;EFF=INTRON(MODIFIER||||805|LOC_Os08g07930|protein_coding|CODING|LOC_Os08g07930.1|1|1) FN1273-S.SNP.8:4468494 chr08:004468494 0 W/4468494-4468494 FN1273-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1097-S.SNP.8:4472229 chr08:004472229 0 W/4472229-4472229 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN580-S.SNP.8:4473066 chr08:004473066 0 W/4473066-4473066 FN580-S Single Base Substitution G-A INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1493-S.SNP.8:4492783 chr08:004492783 0 W/4492783-4492783 FN1493-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g07950 NB-ARC domain containing protein, expressed SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1265-S.SNP.8:4493240 chr08:004493240 0 W/4493240-4493240 FN1265-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN-115.SNP.8:4496565 chr08:004496565 0 W/4496565-4496565 FN-115 Single Base Substitution C-A INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN2338.SNP.8:4504664 chr08:004504664 0 W/4504664-4504664 FN2338 SNP G -> A AC=2;AN=192;BQB=0.484908;DP=5099;DP4=2115,2617,26,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.25948e-27;MQSB=0.930038;RPB=0.884643;SGB=213.527;VDB=0.925949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.8:4511751 chr08:004511751 0 W/4511751-4511751 FN2592-S SNP T -> C AC=2;AN=198;BQB=0.999704;DP=4771;DP4=2232,2290,20,32;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.58957e-27;MQSB=0.947818;RPB=0.531306;SGB=120.174;VDB=0.814863;EFF=INTRON(MODIFIER||||411|LOC_Os08g07970|protein_coding|CODING|LOC_Os08g07970.2|2|1) FN3440-S.SNP.8:4525136 chr08:004525136 0 W/4525136-4525136 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.993271;DP=2569;DP4=1184,1276,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.32461e-10;MQSB=0.998178;RPB=0.185004;SGB=49.835;VDB=0.372961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G664S|841|LOC_Os08g08000|protein_coding|CODING|LOC_Os08g08000.1|9|1) FN1197-S.SNP.8:4529019 chr08:004529019 0 W/4529019-4529019 FN1197-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g08000 DNA binding protein, putative, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN824-S.SNP.8:4530503 chr08:004530503 0 W/4530503-4530503 FN824-S Single Base Substitution C-A INTRON HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2434.SNP.8:4531534 chr08:004531534 0 W/4531534-4531534 FN2434 SNP A -> G AC=2;AN=200;BQB=0.913811;DP=4974;DP4=2435,2225,7,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.921e-11;MQSB=0.686243;RPB=0.703143;SGB=61.9006;VDB=0.0889613;EFF=INTRON(MODIFIER||||841|LOC_Os08g08000|protein_coding|CODING|LOC_Os08g08000.1|1|1) FN2469.SNP.8:4539067 chr08:004539067 0 W/4539067-4539067 FN2469 SNP A -> G AC=1;AN=200;BQB=0.0613446;DP=4212;DP4=2327,1612,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17433e-10;MQSB=0.993226;RPB=0.382351;SGB=19.1209;VDB=0.566267;EFF=INTERGENIC(MODIFIER||||||||||1) FN-382.SNP.8:4540003 chr08:004540003 0 W/4540003-4540003 FN-382 Single Base Substitution G-T INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN2704-S.SNP.8:4540191 chr08:004540191 0 W/4540191-4540191 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.999953;DP=5137;DP4=2610,2349,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.4945e-12;MQSB=0.962179;RPB=0.64315;SGB=72.7161;VDB=0.379614;EFF=INTERGENIC(MODIFIER||||||||||1) FN-382.SNP.8:4545425 chr08:004545425 0 W/4545425-4545425 FN-382 Single Base Substitution T-C INTERGENIC HOMO SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN2593-S.SNP.8:4563265 chr08:004563265 0 W/4563265-4563265 FN2593-S SNP C -> A AC=1;AN=198;BQB=0.209134;DP=4329;DP4=2175,1883,16,21;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.39111e-16;MQSB=0.50464;RPB=0.815407;SGB=122.837;VDB=0.120742;EFF=INTRON(MODIFIER||||98|LOC_Os08g08040|protein_coding|CODING|LOC_Os08g08040.1|3|1) FN-150.SNP.8:4574039 chr08:004574039 0 W/4574039-4574039 FN-150 Single Base Substitution T-A INTRON HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2214-S.SNP.8:4598685 chr08:004598685 0 W/4598685-4598685 FN2214-S SNP C -> A AC=1;AN=190;BQB=0.478816;DP=4912;DP4=2205,2353,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59882e-12;MQSB=0.993444;RPB=0.981229;SGB=51.7524;VDB=0.128373;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.8:4603888 chr08:004603888 0 W/4603888-4603888 FN708-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g08110 diacylglycerol kinase, putative, expressed SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2758-S.SNP.8:4614843 chr08:004614843 0 W/4614843-4614843 FN2758-S SNP A -> G AC=1;AN=200;BQB=0.105179;DP=4850;DP4=2575,2019,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9996e-11;MQSB=0.55749;RPB=0.942522;SGB=20.7261;VDB=0.874465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.8:4626045 chr08:004626045 0 W/4626045-4626045 FN-225 Single Base Substitution T-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN2254-S.SNP.8:4629631 chr08:004629631 0 W/4629631-4629631 FN2254-S SNP A -> G AC=1;AN=190;BQB=0.899824;DP=4554;DP4=2165,2054,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47018e-12;MQSB=0.933588;RPB=0.29886;SGB=80.9724;VDB=0.521456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.8:4636190 chr08:004636190 0 W/4636190-4636190 FN3436-S SNP C -> T AC=1;AN=184;BQB=0.994253;DP=3913;DP4=1740,2095,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.05389e-10;MQSB=0.737387;RPB=0.878195;SGB=46.3132;VDB=0.0735894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H536Y|1098|LOC_Os08g08140|protein_coding|CODING|LOC_Os08g08140.1|7|1) FN2266-S.SNP.8:4642666 chr08:004642666 0 W/4642666-4642666 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.280474;DP=3411;DP4=1768,1344,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85216e-08;MQSB=0.221193;RPB=0.984205;SGB=10.3266;VDB=0.255873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1321-S.SNP.8:4661904 chr08:004661904 0 W/4661904-4661904 FN1321-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1321-S.SNP.8:4661905 chr08:004661905 0 W/4661905-4661905 FN1321-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN975-S.SNP.8:4669943 chr08:004669943 0 W/4669943-4669943 FN975-S Single Base Substitution G-T INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1268-S.SNP.8:4672911 chr08:004672911 0 W/4672911-4672911 FN1268-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g08190 expressed protein SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2096-S.SNP.8:4675485 chr08:004675485 0 W/4675485-4675485 FN2096-S SNP A -> T AC=1;AN=168;BQB=0.00745409;DP=3499;DP4=1251,1555,5,15;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.13812;MQSB=9.12373e-24;RPB=0.575291;SGB=-161.06;VDB=0.0784422;EFF=UTR_3_PRIME(MODIFIER||343||300|LOC_Os08g08190|protein_coding|CODING|LOC_Os08g08190.1|5|1) FN504-S.SNP.8:4675859 chr08:004675859 0 W/4675859-4675859 FN504-S Single Base Substitution C-A INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2544-S.SNP.8:4696630 chr08:004696630 0 W/4696630-4696630 FN2544-S SNP T -> G AC=1;AN=198;BQB=0.737694;DP=4315;DP4=2085,2004,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.9402e-08;MQSB=0.990899;RPB=0.710712;SGB=43.7442;VDB=0.944162;EFF=UTR_3_PRIME(MODIFIER||323||935|LOC_Os08g08210|protein_coding|CODING|LOC_Os08g08210.1|16|1) FN926-S.SNP.8:4696630 chr08:004696630 0 W/4696630-4696630 FN926-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN3850-S.SNP.8:4698849 chr08:004698849 0 W/4698849-4698849 FN3850-S SNP T -> G AC=2;AN=158;BQB=0.879157;DP=2461;DP4=1154,1199,4,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.05964e-06;MQSB=0.882741;RPB=0.260571;SGB=37.4429;VDB=0.545417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.8:4704050 chr08:004704050 0 W/4704050-4704050 FN1182-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g08220 EDA16, putative, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1182-S.SNP.8:4704051 chr08:004704051 0 W/4704051-4704051 FN1182-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g08220 EDA16, putative, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3946-S.SNP.8:4706369 chr08:004706369 0 W/4706369-4706369 FN3946-S SNP A -> T AC=1;AN=168;BQB=0.963614;DP=2537;DP4=1223,1240,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.6481e-10;MQSB=0.999961;RPB=0.779854;SGB=65.4653;VDB=0.60711;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N833Y|848|LOC_Os08g08220|protein_coding|CODING|LOC_Os08g08220.3|8|1),INTRON(MODIFIER||||1030|LOC_Os08g08220|protein_coding|CODING|LOC_Os08g08220.1|8|1),INTRON(MODIFIER||||1030|LOC_Os08g08220|protein_coding|CODING|LOC_Os08g08220.2|7|1) FN2411.SNP.8:4718232 chr08:004718232 0 W/4718232-4718232 FN2411 SNP C -> T AC=1;AN=200;BQB=0.254647;DP=4525;DP4=1957,2161,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220994;MQB=2.77036e-14;MQSB=0.993998;RPB=0.998347;SGB=55.5366;VDB=0.508599;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.8:4722612 chr08:004722612 0 W/4722612-4722612 FN628-S Single Base Substitution G-T INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1115-S.SNP.8:4722956 chr08:004722956 0 W/4722956-4722956 FN1115-S Single Base Substitution C-A INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2462.SNP.8:4724644 chr08:004724644 0 W/4724644-4724644 FN2462 SNP A -> G AC=1;AN=200;BQB=0.935202;DP=5034;DP4=2355,2364,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23391e-08;MQSB=0.976161;RPB=0.697555;SGB=24.2746;VDB=0.758724;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.8:4724789 chr08:004724789 0 W/4724789-4724789 FN4009-S SNP T -> G AC=2;AN=168;BQB=0.67869;DP=2273;DP4=1144,1034,14,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.76984e-12;MQSB=0.998906;RPB=0.979257;SGB=-110.908;VDB=0.819426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.8:4724859 chr08:004724859 0 W/4724859-4724859 FN2534-S SNP A -> T AC=1;AN=198;BQB=0.99985;DP=3953;DP4=1830,1903,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.66307e-09;MQSB=0.780301;RPB=0.986191;SGB=24.1541;VDB=0.405613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.8:4727035 chr08:004727035 0 W/4727035-4727035 FN2617-S SNP G -> A AC=1;AN=198;BQB=0.982501;DP=3972;DP4=1715,1991,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.01416e-12;MQSB=0.983834;RPB=0.337794;SGB=55.2955;VDB=0.275652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.8:4727519 chr08:004727519 0 W/4727519-4727519 FN1373-S Single Base Substitution C-G INTERGENIC Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-397.SNP.8:4733444 chr08:004733444 0 W/4733444-4733444 FN-397 Single Base Substitution T-A INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN_829-2-5.SNP.8:4736363 chr08:004736363 0 W/4736363-4736363 FN_829-2-5 Single Base Substitution C-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2390.SNP.8:4740010 chr08:004740010 0 W/4740010-4740010 FN2390 SNP A -> G AC=1;AN=200;BQB=0.757755;DP=4869;DP4=2133,2455,15,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.52032e-11;MQSB=0.807932;RPB=0.251591;SGB=76.3213;VDB=0.481953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.8:4757565 chr08:004757565 0 W/4757565-4757565 FN3808-S SNP T -> C AC=2;AN=190;BQB=0.988868;DP=2792;DP4=1304,1342,13,14;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0114613;MQB=0.916326;MQSB=0;RPB=0.419242;SGB=54.3062;VDB=0.0686388;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L65|940|LOC_Os08g08300|protein_coding|CODING|LOC_Os08g08300.1|1|1) FN2185-S.SNP.8:4772904 chr08:004772904 0 W/4772904-4772904 FN2185-S SNP G -> T AC=1;AN=190;BQB=0.920996;DP=4362;DP4=2267,1864,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.98382e-11;MQSB=0.6298;RPB=0.422276;SGB=80.9724;VDB=0.369462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.8:4773395 chr08:004773395 0 W/4773395-4773395 FN3311-S Single Base Substitution G-A INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3311-S.SNP.8:4773396 chr08:004773396 0 W/4773396-4773396 FN3311-S Single Base Substitution T-A INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3770-S.SNP.8:4783329 chr08:004783329 0 W/4783329-4783329 FN3770-S SNP G -> T AC=1;AN=190;BQB=0.293995;DP=2948;DP4=1318,1522,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.24607e-07;MQSB=0.950668;RPB=0.976893;SGB=49.0954;VDB=0.989801;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.8:4783330 chr08:004783330 0 W/4783330-4783330 FN3770-S SNP G -> T AC=1;AN=190;BQB=0.997049;DP=2954;DP4=1330,1525,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21394e-07;MQSB=0.922763;RPB=0.755721;SGB=36.1006;VDB=0.993613;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.8:4784381 chr08:004784381 0 W/4784381-4784381 FN473-S Single Base Substitution C-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN3425-S.SNP.8:4786515 chr08:004786515 0 W/4786515-4786515 FN3425-S SNP G -> A AC=2;AN=184;BQB=0.996971;DP=2703;DP4=1417,1185,13,11;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.43695e-11;MQSB=0.00826366;RPB=0.0919142;SGB=45.9712;VDB=0.311808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.8:4786679 chr08:004786679 0 W/4786679-4786679 FN2497 SNP T -> G AC=1;AN=200;BQB=0.219672;DP=4965;DP4=2245,2303,8,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00020141;MQB=0.0002546;MQSB=0.489848;RPB=0.234079;SGB=11.0951;VDB=0.210267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.8:4787468 chr08:004787468 0 W/4787468-4787468 FN2136-S SNP C -> G AC=1;AN=168;BQB=0.12324;DP=3103;DP4=1471,1608,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000293659;MQSB=0.897787;RPB=0.964073;SGB=27.8863;VDB=0.643457;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.8:4788281 chr08:004788281 0 W/4788281-4788281 FN1117-S Single Base Substitution T-C INTERGENIC HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN4106-S.SNP.8:4788907 chr08:004788907 0 W/4788907-4788907 FN4106-S SNP A -> T AC=2;AN=182;BQB=0.995503;DP=2297;DP4=1143,1102,7,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.57004e-09;MQSB=0.9164;RPB=0.462359;SGB=57.644;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.8:4798600 chr08:004798600 0 W/4798600-4798600 FN3370-S SNP G -> A AC=1;AN=184;BQB=0.999576;DP=4099;DP4=1871,2112,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0744084;MQB=0.131871;MQSB=1.79225e-11;RPB=0.996886;SGB=18.2315;VDB=0.0288079;EFF=INTRON(MODIFIER||||1281|LOC_Os08g08350|protein_coding|CODING|LOC_Os08g08350.1|1|1) FN-243.SNP.8:4812031 chr08:004812031 0 W/4812031-4812031 FN-243 Single Base Substitution T-C INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN433-S.SNP.8:4833456 chr08:004833456 0 W/4833456-4833456 FN433-S Single Base Substitution C-T INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN3064-S.SNP.8:4834974 chr08:004834974 0 W/4834974-4834974 FN3064-S SNP A -> T AC=1;AN=184;BQB=0.950015;DP=3299;DP4=1683,1467,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00363747;MQB=0.0256661;MQSB=1.42522e-05;RPB=0.985623;SGB=21.6609;VDB=0.351304;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.8:4840863 chr08:004840863 0 W/4840863-4840863 FN2484 SNP G -> A AC=1;AN=200;BQB=0.96677;DP=4162;DP4=1951,1939,7,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00264296;MQB=1.31962e-08;MQSB=0.0370749;RPB=0.397005;SGB=72.6852;VDB=0.150977;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.8:4842628 chr08:004842628 0 W/4842628-4842628 FN3927-S SNP A -> C AC=1;AN=158;BQB=0.995507;DP=2695;DP4=1356,1185,14,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=4.15152e-08;MQSB=0.251497;RPB=0.124784;SGB=38.0354;VDB=0.370007;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccG|P270|693|LOC_Os08g08400|protein_coding|CODING|LOC_Os08g08400.1|5|1) FN4325-S.SNP.8:4842731 chr08:004842731 0 W/4842731-4842731 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.996144;DP=2420;DP4=1141,1216,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.77836e-05;MQSB=0.371219;RPB=0.999987;SGB=30.1021;VDB=0.169891;EFF=INTRON(MODIFIER||||693|LOC_Os08g08400|protein_coding|CODING|LOC_Os08g08400.1|4|1) FN1636-S.SNP.8:4848105 chr08:004848105 0 W/4848105-4848105 FN1636-S Single Base Substitution A-G INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1053-S.SNP.8:4849027 chr08:004849027 0 W/4849027-4849027 FN1053-S Single Base Substitution A-G INTRON HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN899-S.SNP.8:4854231 chr08:004854231 0 W/4854231-4854231 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN899-S.SNP.8:4854232 chr08:004854232 0 W/4854232-4854232 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2788-S.SNP.8:4855378 chr08:004855378 0 W/4855378-4855378 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.953858;DP=3852;DP4=2061,1581,7,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.03477e-10;MQSB=0.985164;RPB=0.642168;SGB=81.7147;VDB=0.0636222;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.8:4864184 chr08:004864184 0 W/4864184-4864184 FN809-S Single Base Substitution C-T INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN-286.SNP.8:4865902 chr08:004865902 0 W/4865902-4865902 FN-286 Single Base Substitution A-T INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2595-S.SNP.8:4867770 chr08:004867770 0 W/4867770-4867770 FN2595-S SNP C -> T AC=1;AN=186;BQB=0.950721;DP=3938;DP4=1836,1857,9,11;HOB=5.78101e-05;ICB=0.000116242;MQ=45;MQ0F=0;MQB=2.34536e-10;MQSB=0.917991;RPB=0.959519;SGB=12.5396;VDB=0.298972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.8:4869838 chr08:004869838 0 W/4869838-4869838 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.946351;DP=5140;DP4=2637,2245,8,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00972763;MQB=1.35246e-07;MQSB=0.996968;RPB=0.190968;SGB=54.6902;VDB=0.22938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P398A|846|LOC_Os08g08450|protein_coding|CODING|LOC_Os08g08450.1|2|1) FN1065-S.SNP.8:4872092 chr08:004872092 0 W/4872092-4872092 FN1065-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g08460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2692-S.SNP.8:4877491 chr08:004877491 0 W/4877491-4877491 FN2692-S SNP G -> C AC=1;AN=200;BQB=0.385989;DP=4669;DP4=2170,2277,15,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000856714;MQB=7.99643e-14;MQSB=0.999949;RPB=0.478287;SGB=23.9365;VDB=0.516397;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Ggg|R451G|1987|LOC_Os08g08460|protein_coding|CODING|LOC_Os08g08460.1|3|1) FN2383.SNP.8:4879379 chr08:004879379 0 W/4879379-4879379 FN2383 SNP G -> T AC=1;AN=192;BQB=0.25454;DP=4897;DP4=2066,2459,4,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.67541e-09;MQSB=0.759858;RPB=0.490763;SGB=-88.6243;VDB=0.465868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.8:4879497 chr08:004879497 0 W/4879497-4879497 FN2378 SNP A -> G AC=1;AN=192;BQB=0.356494;DP=5080;DP4=2408,2439,21,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00354331;MQB=3.78394e-18;MQSB=0.712365;RPB=0.887675;SGB=163.319;VDB=0.283319;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.8:4881368 chr08:004881368 0 W/4881368-4881368 FN915-S Single Base Substitution G-T INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3800-S.SNP.8:4886605 chr08:004886605 0 W/4886605-4886605 FN3800-S SNP G -> T AC=1;AN=190;BQB=0.945034;DP=3860;DP4=1882,1688,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.073057;MQB=0.54068;MQSB=0;RPB=0.726995;SGB=99.1879;VDB=0.563288;EFF=INTERGENIC(MODIFIER||||||||||1) FN-31.SNP.8:4890989 chr08:004890989 0 W/4890989-4890989 FN-31 Single Base Substitution G-A INTERGENIC Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN337-S.SNP.8:4892650 chr08:004892650 0 W/4892650-4892650 FN337-S Single Base Substitution G-C INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN337-S.SNP.8:4892651 chr08:004892651 0 W/4892651-4892651 FN337-S Single Base Substitution T-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN845-S.SNP.8:4898027 chr08:004898027 0 W/4898027-4898027 FN845-S Single Base Substitution C-G INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2715-S.SNP.8:4898554 chr08:004898554 0 W/4898554-4898554 FN2715-S SNP T -> G AC=2;AN=200;BQB=0.99288;DP=5168;DP4=2375,2514,26,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.98039e-21;MQSB=0.833615;RPB=0.536623;SGB=89.4038;VDB=0.333929;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.8:4898574 chr08:004898574 0 W/4898574-4898574 FN2116-S SNP T -> G AC=1;AN=168;BQB=0.00074046;DP=4297;DP4=2356,1886,19,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94162e-11;MQSB=0.832526;RPB=0.47881;SGB=-284.023;VDB=0.420954;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.8:4905593 chr08:004905593 0 W/4905593-4905593 FN561-S Single Base Substitution G-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN3675-S.SNP.8:4906671 chr08:004906671 0 W/4906671-4906671 FN3675-S SNP G -> A AC=1;AN=190;BQB=0.940673;DP=2961;DP4=1403,1422,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22442e-05;MQSB=0.801491;RPB=0.428315;SGB=30.8803;VDB=0.0583107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.8:4923119 chr08:004923119 0 W/4923119-4923119 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.536001;DP=5516;DP4=2888,2436,22,32;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0416969;MQB=1.01026e-06;MQSB=2.02144e-31;RPB=0.0248812;SGB=-229.473;VDB=0.864467;EFF=INTRON(MODIFIER||||585|LOC_Os08g08540|protein_coding|CODING|LOC_Os08g08540.1|2|1) FN3947-S.SNP.8:4923119 chr08:004923119 0 W/4923119-4923119 FN3947-S SNP C -> T AC=1;AN=168;BQB=0.985234;DP=5369;DP4=2741,2375,11,34;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0450736;MQB=7.17147e-08;MQSB=0;RPB=8.5073e-05;SGB=-646.263;VDB=0.899926;EFF=INTRON(MODIFIER||||585|LOC_Os08g08540|protein_coding|CODING|LOC_Os08g08540.1|2|1) FN931-S.SNP.8:4923119 chr08:004923119 0 W/4923119-4923119 FN931-S Single Base Substitution C-T INTRON HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN-165.SNP.8:4923703 chr08:004923703 0 W/4923703-4923703 FN-165 Single Base Substitution C-T INTRON HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN2275-S.SNP.8:4923838 chr08:004923838 0 W/4923838-4923838 FN2275-S SNP C -> T AC=1;AN=190;BQB=0.944587;DP=7954;DP4=4343,3007,30,15;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.27131;MQB=0.026807;MQSB=3.33106e-08;RPB=0.509909;SGB=100.276;VDB=0.300243;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T445|585|LOC_Os08g08540|protein_coding|CODING|LOC_Os08g08540.1|2|1) FN1265-S.SNP.8:4931363 chr08:004931363 0 W/4931363-4931363 FN1265-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN4017-S.SNP.8:4941730 chr08:004941730 0 W/4941730-4941730 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.537636;DP=2713;DP4=1324,1258,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.32331e-07;MQSB=0.641847;RPB=0.94669;SGB=61.0344;VDB=0.956158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V232I|445|LOC_Os08g08560|protein_coding|CODING|LOC_Os08g08560.1|5|1) FN2288.SNP.8:4943005 chr08:004943005 0 W/4943005-4943005 FN2288 SNP G -> A AC=1;AN=192;BQB=0.999926;DP=4577;DP4=2051,2252,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.17617e-18;MQSB=0.305193;RPB=0.166515;SGB=-6.8678;VDB=0.281461;EFF=INTRON(MODIFIER||||445|LOC_Os08g08560|protein_coding|CODING|LOC_Os08g08560.1|1|1) FN742-S.SNP.8:4943306 chr08:004943306 0 W/4943306-4943306 FN742-S Single Base Substitution G-A INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN463-S.SNP.8:4946839 chr08:004946839 0 W/4946839-4946839 FN463-S Single Base Substitution T-C INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN3903-S.SNP.8:4949863 chr08:004949863 0 W/4949863-4949863 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.947924;DP=2456;DP4=1191,1195,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.85342e-07;MQSB=0.953288;RPB=0.813488;SGB=42.6978;VDB=0.190776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M137I|192|LOC_Os08g08570|protein_coding|CODING|LOC_Os08g08570.1|3|1) FN3664-S.SNP.8:4960220 chr08:004960220 0 W/4960220-4960220 FN3664-S SNP G -> A AC=1;AN=190;BQB=0.859514;DP=2774;DP4=1355,1294,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.9495e-08;MQSB=0.937009;RPB=0.991956;SGB=26.2136;VDB=0.864007;EFF=INTRON(MODIFIER||||274|LOC_Os08g08580|protein_coding|CODING|LOC_Os08g08580.1|2|1) FN-156.SNP.8:4960332 chr08:004960332 0 W/4960332-4960332 FN-156 Single Base Substitution T-G INTRON HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2676-S.SNP.8:4961782 chr08:004961782 0 W/4961782-4961782 FN2676-S SNP T -> A AC=2;AN=200;BQB=0.901982;DP=4599;DP4=2369,1942,22,34;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=4.42632e-26;MQSB=0.704116;RPB=0.0348813;SGB=9.88623;VDB=0.0209742;EFF=INTRON(MODIFIER||||274|LOC_Os08g08580|protein_coding|CODING|LOC_Os08g08580.1|1|1) FN879-S.SNP.8:4965632 chr08:004965632 0 W/4965632-4965632 FN879-S Single Base Substitution C-T INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN_776-5-1.SNP.8:4966370 chr08:004966370 0 W/4966370-4966370 FN_776-5-1 Single Base Substitution G-A Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN964-S.SNP.8:4967419 chr08:004967419 0 W/4967419-4967419 FN964-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1422-S.SNP.8:4976180 chr08:004976180 0 W/4976180-4976180 FN1422-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g08600 retrotransposon protein, putative, unclassified, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3774-S.SNP.8:4980156 chr08:004980156 0 W/4980156-4980156 FN3774-S SNP G -> A AC=1;AN=190;BQB=0.993748;DP=3286;DP4=1608,1571,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00152161;MQB=2.16966e-12;MQSB=0.93132;RPB=0.996462;SGB=75.1932;VDB=0.757532;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S746|753|LOC_Os08g08610|protein_coding|CODING|LOC_Os08g08610.1|3|1) FN2640-S.SNP.8:4982367 chr08:004982367 0 W/4982367-4982367 FN2640-S SNP G -> C AC=2;AN=200;BQB=0.474061;DP=4818;DP4=2253,2269,26,41;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.16391e-38;MQSB=0.990734;RPB=0.26656;SGB=159.743;VDB=0.914632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T119S|753|LOC_Os08g08610|protein_coding|CODING|LOC_Os08g08610.1|1|1) FN2542-S.SNP.8:4984924 chr08:004984924 0 W/4984924-4984924 FN2542-S SNP C -> A AC=1;AN=188;BQB=0.728261;DP=3822;DP4=1800,1749,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00156986;MQB=4.61254e-08;MQSB=3.70928e-13;RPB=0.956749;SGB=37.1297;VDB=0.238084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G5V|603|LOC_Os08g08620|protein_coding|CODING|LOC_Os08g08620.1|1|1) FN2658-S.SNP.8:4987631 chr08:004987631 0 W/4987631-4987631 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.908342;DP=4631;DP4=2071,2127,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.858e-12;MQSB=0.563677;RPB=0.861653;SGB=25.5416;VDB=0.314928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P39L|135|LOC_Os08g08630|protein_coding|CODING|LOC_Os08g08630.1|1|1) FN1613-S.SNP.8:4991451 chr08:004991451 0 W/4991451-4991451 FN1613-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g08640 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN3285-S.SNP.8:4993546 chr08:004993546 0 W/4993546-4993546 FN3285-S SNP G -> C AC=1;AN=184;BQB=0.961663;DP=2862;DP4=1406,1384,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.020615;MQB=0.0950027;MQSB=0.30356;RPB=0.946973;SGB=53.2642;VDB=0.273837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A787G|1516|LOC_Os08g08640|protein_coding|CODING|LOC_Os08g08640.1|4|1) FN4164-S.SNP.8:5008697 chr08:005008697 0 W/5008697-5008697 FN4164-S SNP T -> C AC=2;AN=170;BQB=0.716668;DP=2194;DP4=1296,804,11,9;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.0770283;MQB=0.456734;MQSB=0.0475777;RPB=0.429351;SGB=58.9766;VDB=0.975903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.8:5010862 chr08:005010862 0 W/5010862-5010862 FN3600-S SNP T -> C AC=1;AN=190;BQB=0.923114;DP=3352;DP4=1499,1714,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.173031;MQB=0.969374;MQSB=0.173657;RPB=0.535197;SGB=7.21887;VDB=0.511604;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.8:5011163 chr08:005011163 0 W/5011163-5011163 FN1317-S Single Base Substitution T-C INTRON HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2496.SNP.8:5011929 chr08:005011929 0 W/5011929-5011929 FN2496 SNP G -> A AC=1;AN=200;BQB=0.863843;DP=3884;DP4=1885,1841,6,4;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0363028;MQB=0.0114725;MQSB=2.21377e-09;RPB=0.516873;SGB=40.4492;VDB=0.0015167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S8F|241|LOC_Os08g08655|protein_coding|CODING|LOC_Os08g08655.1|1|1) FN920-S.SNP.8:5011929 chr08:005011929 0 W/5011929-5011929 FN920-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g08655 expressed protein SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN621-S.SNP.8:5015928 chr08:005015928 0 W/5015928-5015928 FN621-S Single Base Substitution C-A INTRON HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN1746-S.SNP.8:5018954 chr08:005018954 0 W/5018954-5018954 FN1746-S SNP C -> A AC=1;AN=188;BQB=0.860532;DP=2606;DP4=1242,1335,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00038373;MQB=1.4011e-07;MQSB=0.956108;RPB=0.0579247;SGB=48.979;VDB=0.07299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A376S|580|LOC_Os08g08670|protein_coding|CODING|LOC_Os08g08670.1|5|1) FN1528-S.SNP.8:5022225 chr08:005022225 0 W/5022225-5022225 FN1528-S Single Base Substitution T-A INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN2436.SNP.8:5024654 chr08:005024654 0 W/5024654-5024654 FN2436 SNP G -> T AC=2;AN=200;BQB=0.930543;DP=4499;DP4=1891,2289,20,32;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00288953;MQB=9.76966e-27;MQSB=0.762164;RPB=0.707889;SGB=120.666;VDB=0.81415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P524Q|581|LOC_Os08g08680|protein_coding|CODING|LOC_Os08g08680.1|5|1) FN623-S.SNP.8:5025204 chr08:005025204 0 W/5025204-5025204 FN623-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g08680 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2266-S.SNP.8:5025631 chr08:005025631 0 W/5025631-5025631 FN2266-S SNP T -> C AC=1;AN=190;BQB=0.990165;DP=5450;DP4=2530,2510,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0108257;MQB=0.000288582;MQSB=0.192951;RPB=0.931089;SGB=53.8699;VDB=0.158996;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D214G|581|LOC_Os08g08680|protein_coding|CODING|LOC_Os08g08680.1|4|1) FN2083-S.SNP.8:5027002 chr08:005027002 0 W/5027002-5027002 FN2083-S SNP C -> G AC=2;AN=168;BQB=0.384564;DP=4050;DP4=1845,2103,22,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.62736e-25;MQSB=0.966925;RPB=0.922536;SGB=-110.436;VDB=0.235248;EFF=INTRON(MODIFIER||||581|LOC_Os08g08680|protein_coding|CODING|LOC_Os08g08680.1|1|1) FN2268-S.SNP.8:5029235 chr08:005029235 0 W/5029235-5029235 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.999726;DP=5471;DP4=2570,2347,24,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63819e-25;MQSB=0.996392;RPB=0.58729;SGB=55.389;VDB=0.859611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.8:5036482 chr08:005036482 0 W/5036482-5036482 FN3830-S SNP C -> A AC=1;AN=190;BQB=0.995071;DP=1264;DP4=360,849,1,7;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0150316;MQB=0.256272;MQSB=3.67436e-13;RPB=0.991098;SGB=18.3316;VDB=0.0946644;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.8:5040957 chr08:005040957 0 W/5040957-5040957 FN_829-2-5 Single Base Substitution G-C Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN1513-S.SNP.8:5044611 chr08:005044611 0 W/5044611-5044611 FN1513-S Single Base Substitution G-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN3493-S.SNP.8:5050326 chr08:005050326 0 W/5050326-5050326 FN3493-S SNP T -> G AC=1;AN=184;BQB=0.964389;DP=3617;DP4=1921,1283,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000707921;MQSB=1.12636e-08;RPB=0.269058;SGB=25.1826;VDB=0.185182;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.8:5051003 chr08:005051003 0 W/5051003-5051003 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.402815;DP=9727;DP4=4476,4406,17,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09987e-12;MQSB=0.935968;RPB=0.978468;SGB=-100.991;VDB=0.783439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.8:5057293 chr08:005057293 0 W/5057293-5057293 FN2657-S SNP T -> A AC=1;AN=200;BQB=0.631357;DP=4479;DP4=2135,2080,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17488e-11;MQSB=0.988877;RPB=0.594376;SGB=65.5058;VDB=0.0368796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.8:5062470 chr08:005062470 0 W/5062470-5062470 FN2782-S SNP C -> T AC=1;AN=186;BQB=0.758756;DP=2675;DP4=1183,1138,10,13;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.46998e-11;MQSB=0.805045;RPB=0.395542;SGB=100.095;VDB=0.64756;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.8:5066289 chr08:005066289 0 W/5066289-5066289 FN473-S Single Base Substitution G-A INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. W385-6-8-4.SNP.8:5072217 chr08:005072217 0 W/5072217-5072217 W385-6-8-4 Single Base Substitution C-T INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN-294.SNP.8:5074754 chr08:005074754 0 W/5074754-5074754 FN-294 Single Base Substitution T-G INTERGENIC HOMO SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN753-S.SNP.8:5078280 chr08:005078280 0 W/5078280-5078280 FN753-S Single Base Substitution C-T INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN-91.SNP.8:5081786 chr08:005081786 0 W/5081786-5081786 FN-91 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g08760 ubiquitin family protein, putative, expressed SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN3326-S.SNP.8:5082423 chr08:005082423 0 W/5082423-5082423 FN3326-S SNP T -> C AC=1;AN=184;BQB=0.906336;DP=2956;DP4=1214,1607,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.83149e-06;MQSB=0.014305;RPB=0.896919;SGB=-15.2358;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.8:5085704 chr08:005085704 0 W/5085704-5085704 FN1014-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g08770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN3528-S.SNP.8:5086551 chr08:005086551 0 W/5086551-5086551 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.999998;DP=4771;DP4=2560,2075,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.126808;MQB=0.188393;MQSB=0;RPB=0.999204;SGB=82.0471;VDB=0.843463;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||1902|LOC_Os08g08770|protein_coding|CODING|LOC_Os08g08770.1|3|1),INTRON(MODIFIER||||1902|LOC_Os08g08770|protein_coding|CODING|LOC_Os08g08770.1|2|1);LOF=(LOC_Os08g08770|LOC_Os08g08770|1|1.00) FN2572-S.SNP.8:5087161 chr08:005087161 0 W/5087161-5087161 FN2572-S Single Base Substitution A-T STOP_GAINED HET LOC_Os08g08770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3828-S.SNP.8:5087396 chr08:005087396 0 W/5087396-5087396 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.8895;DP=3942;DP4=1655,2159,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0882801;MQB=0.573902;MQSB=2.16487e-05;RPB=0.464892;SGB=46.7622;VDB=0.466606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1131V|1902|LOC_Os08g08770|protein_coding|CODING|LOC_Os08g08770.1|4|1) FN4188-S.SNP.8:5092012 chr08:005092012 0 W/5092012-5092012 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.98637;DP=2597;DP4=1123,1381,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00770119;MQB=2.03108e-09;MQSB=0.862925;RPB=0.999554;SGB=74.528;VDB=0.868704;EFF=INTRON(MODIFIER||||811|LOC_Os08g08780|protein_coding|CODING|LOC_Os08g08780.1|1|1) FN1240-S.SNP.8:5100853 chr08:005100853 0 W/5100853-5100853 FN1240-S Single Base Substitution C-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2164-S.SNP.8:5113798 chr08:005113798 0 W/5113798-5113798 FN2164-S SNP T -> C AC=2;AN=168;BQB=0.73516;DP=3114;DP4=1560,1504,22,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.82964e-19;MQSB=0.994089;RPB=0.971405;SGB=75.6627;VDB=0.88073;EFF=INTRON(MODIFIER||||784|LOC_Os08g08820|protein_coding|CODING|LOC_Os08g08820.1|5|1),INTRON(MODIFIER||||784|LOC_Os08g08820|protein_coding|CODING|LOC_Os08g08820.2|5|1) FN1509-S.SNP.8:5118763 chr08:005118763 0 W/5118763-5118763 FN1509-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1760-S.SNP.8:5118763 chr08:005118763 0 W/5118763-5118763 FN1760-S SNP C -> G AC=2;AN=188;BQB=0.830953;DP=2797;DP4=1997,756,26,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.89782e-19;MQSB=0.99618;RPB=0.953537;SGB=33.3175;VDB=0.0827491;EFF=UTR_3_PRIME(MODIFIER||2217||971|LOC_Os08g08830|protein_coding|CODING|LOC_Os08g08830.1|7|1) FN893-S.SNP.8:5119919 chr08:005119919 0 W/5119919-5119919 FN893-S Single Base Substitution G-A INTRON HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1405-S.SNP.8:5121394 chr08:005121394 0 W/5121394-5121394 FN1405-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1384-S.SNP.8:5127276 chr08:005127276 0 W/5127276-5127276 FN1384-S Single Base Substitution G-T INTRON HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1384-S.SNP.8:5127277 chr08:005127277 0 W/5127277-5127277 FN1384-S Single Base Substitution C-T INTRON HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN_830-6-1.SNP.8:5136325 chr08:005136325 0 W/5136325-5136325 FN_830-6-1 Single Base Substitution T-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3823-S.SNP.8:5137883 chr08:005137883 0 W/5137883-5137883 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.71415;DP=2669;DP4=1361,1213,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36094e-05;MQSB=0.246565;RPB=0.157015;SGB=39.6545;VDB=0.569839;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.8:5138315 chr08:005138315 0 W/5138315-5138315 FN1579-S Single Base Substitution G-A INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2493.SNP.8:5143916 chr08:005143916 0 W/5143916-5143916 FN2493 SNP A -> G AC=1;AN=200;BQB=0.198671;DP=4814;DP4=2424,2070,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.08e-09;MQSB=0.397031;RPB=0.860719;SGB=26.8797;VDB=0.528889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.8:5146300 chr08:005146300 0 W/5146300-5146300 FN1030-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN3746-S.SNP.8:5158216 chr08:005158216 0 W/5158216-5158216 FN3746-S SNP A -> G AC=1;AN=190;BQB=0.940084;DP=2789;DP4=1371,1336,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.201147;MQB=0.941943;MQSB=0.0555205;RPB=0.947688;SGB=53.6492;VDB=0.620105;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.8:5160174 chr08:005160174 0 W/5160174-5160174 FN1458-S Single Base Substitution C-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1521-S.SNP.8:5161938 chr08:005161938 0 W/5161938-5161938 FN1521-S Single Base Substitution A-T INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2663-S.SNP.8:5169462 chr08:005169462 0 W/5169462-5169462 FN2663-S SNP G -> T AC=2;AN=200;BQB=0.36554;DP=4608;DP4=2290,2004,26,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.38186e-22;MQSB=0.791013;RPB=0.853004;SGB=130.399;VDB=0.921036;EFF=INTRON(MODIFIER||||199|LOC_Os08g08880|protein_coding|CODING|LOC_Os08g08880.1|7|1) FN2486.SNP.8:5172150 chr08:005172150 0 W/5172150-5172150 FN2486 SNP G -> A AC=1;AN=200;BQB=0.994874;DP=4430;DP4=1837,2283,5,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00433009;MQSB=0.16652;RPB=0.512248;SGB=36.6644;VDB=0.0614523;EFF=INTRON(MODIFIER||||185|LOC_Os08g08890|protein_coding|CODING|LOC_Os08g08890.1|4|1) FN1129-S.SNP.8:5174220 chr08:005174220 0 W/5174220-5174220 FN1129-S Single Base Substitution C-A INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1376-S.SNP.8:5177330 chr08:005177330 0 W/5177330-5177330 FN1376-S Single Base Substitution A-G INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN944-S.SNP.8:5191726 chr08:005191726 0 W/5191726-5191726 FN944-S Single Base Substitution G-A INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN-149.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN-149 Single Base Substitution G-A INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN-286.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN-286 Single Base Substitution G-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-307.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN-307 Single Base Substitution G-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-409.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN-409 Single Base Substitution G-A INTERGENIC HOMO SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1072-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1153-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1153-S Single Base Substitution G-A INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1337-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1337-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1435-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1435-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1450-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1450-S Single Base Substitution G-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1737-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN1737-S SNP G -> A AC=2;AN=188;BQB=0.156259;DP=1783;DP4=1104,574,18,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.27196e-11;MQSB=0.969655;RPB=0.65919;SGB=59.7021;VDB=0.556701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN2483 SNP G -> A AC=2;AN=200;BQB=0.15414;DP=3264;DP4=1584,1358,17,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.42756e-13;MQSB=0.990619;RPB=0.647146;SGB=127.947;VDB=0.838682;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN4038-S SNP G -> A AC=2;AN=168;BQB=0.570071;DP=1892;DP4=814,924,9,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.81495e-13;MQSB=0.32489;RPB=0.997458;SGB=86.2102;VDB=0.945056;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.806194;DP=2275;DP4=1045,1094,2,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.32254e-05;MQSB=0.984504;RPB=0.953968;SGB=25.0952;VDB=0.717543;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN493-S Single Base Substitution G-A INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN571-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN571-S Single Base Substitution G-A INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN731-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN731-S Single Base Substitution G-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN924-S.SNP.8:5194750 chr08:005194750 0 W/5194750-5194750 FN924-S Single Base Substitution G-A INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3777-S.SNP.8:5197525 chr08:005197525 0 W/5197525-5197525 FN3777-S SNP T -> A AC=1;AN=190;BQB=0.907985;DP=3096;DP4=1630,1362,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.186693;MQB=0.358835;MQSB=8.97101e-21;RPB=0.727853;SGB=53.6492;VDB=0.550846;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gAa|V454E|1083|LOC_Os08g08940|protein_coding|CODING|LOC_Os08g08940.1|2|1) FN3280-S.SNP.8:5201263 chr08:005201263 0 W/5201263-5201263 FN3280-S SNP G -> A AC=1;AN=184;BQB=0.824487;DP=2714;DP4=1232,1319,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0221076;MQB=0.669374;MQSB=1.48575e-12;RPB=0.575084;SGB=3.75875;VDB=0.770477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V83M|1210|LOC_Os08g08950|protein_coding|CODING|LOC_Os08g08950.1|1|1) FN1263-S.SNP.8:5206931 chr08:005206931 0 W/5206931-5206931 FN1263-S Single Base Substitution G-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN427-S.SNP.8:5207026 chr08:005207026 0 W/5207026-5207026 FN427-S Single Base Substitution C-T INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1224-S.SNP.8:5207781 chr08:005207781 0 W/5207781-5207781 FN1224-S Single Base Substitution T-G INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1429-S.SNP.8:5210912 chr08:005210912 0 W/5210912-5210912 FN1429-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1453-S.SNP.8:5213599 chr08:005213599 0 W/5213599-5213599 FN1453-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN903-S.SNP.8:5214588 chr08:005214588 0 W/5214588-5214588 FN903-S Single Base Substitution C-T INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1625-S.SNP.8:5215928 chr08:005215928 0 W/5215928-5215928 FN1625-S Single Base Substitution A-G INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.8:5215928 chr08:005215928 0 W/5215928-5215928 FN1626-S SNP A -> G AC=1;AN=188;BQB=0.489657;DP=3453;DP4=1915,1500,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.34718e-14;MQSB=0.95609;RPB=0.743055;SGB=-77.9263;VDB=0.131192;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.8:5218764 chr08:005218764 0 W/5218764-5218764 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.998393;DP=1929;DP4=811,1013,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02555e-08;MQSB=0.632565;RPB=0.338022;SGB=65.6427;VDB=0.871283;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.8:5226459 chr08:005226459 0 W/5226459-5226459 FN3376-S SNP G -> A AC=1;AN=184;BQB=0.913793;DP=2544;DP4=1373,1032,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39641e-08;MQSB=0.975024;RPB=0.972259;SGB=53.2642;VDB=0.403098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.8:5227375 chr08:005227375 0 W/5227375-5227375 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.942615;DP=5001;DP4=2551,2191,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.9463e-08;MQSB=0.35298;RPB=0.984603;SGB=32.5467;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.8:5227749 chr08:005227749 0 W/5227749-5227749 FN2293 SNP A -> G AC=1;AN=192;BQB=0.327462;DP=5274;DP4=2507,2464,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0057e-11;MQSB=0.993488;RPB=0.75883;SGB=18.3052;VDB=0.090243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.8:5229295 chr08:005229295 0 W/5229295-5229295 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.94155;DP=2724;DP4=1434,1196,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.89655e-06;MQSB=0.943142;RPB=0.663101;SGB=21.8853;VDB=0.426121;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A62|224|LOC_Os08g08980|protein_coding|CODING|LOC_Os08g08980.1|2|1) FN2222-S.SNP.8:5237628 chr08:005237628 0 W/5237628-5237628 FN2222-S SNP A -> G AC=1;AN=190;BQB=0.998806;DP=4719;DP4=2423,2080,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.92426e-15;MQSB=0.320251;RPB=0.192856;SGB=82.301;VDB=0.414377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.8:5237860 chr08:005237860 0 W/5237860-5237860 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN-159.SNP.8:5247044 chr08:005247044 0 W/5247044-5247044 FN-159 Single Base Substitution G-T INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3499-S.SNP.8:5249389 chr08:005249389 0 W/5249389-5249389 FN3499-S SNP C -> A AC=1;AN=188;BQB=0.788636;DP=2888;DP4=1525,1294,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35492e-07;MQSB=0.996397;RPB=0.316201;SGB=35.9843;VDB=0.0718255;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aAa|T137K|224|LOC_Os08g09020|protein_coding|CODING|LOC_Os08g09020.1|2|1) FN3917-S.SNP.8:5256497 chr08:005256497 0 W/5256497-5256497 FN3917-S SNP C -> G AC=2;AN=158;BQB=0.995274;DP=1338;DP4=599,606,8,1;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=0.00601669;MQSB=0.985179;RPB=0.912475;SGB=33.9591;VDB=0.453107;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L21V|88|LOC_Os08g09050|protein_coding|CODING|LOC_Os08g09050.1|1|1) FN4108-S.SNP.8:5264734 chr08:005264734 0 W/5264734-5264734 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.850694;DP=2850;DP4=1402,1377,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.42357e-07;MQSB=0.961583;RPB=0.108808;SGB=62.1548;VDB=0.0608454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P87S|225|LOC_Os08g09080|protein_coding|CODING|LOC_Os08g09080.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P86S|224|LOC_Os08g09080|protein_coding|CODING|LOC_Os08g09080.2|2|1) FN848-S.SNP.8:5283258 chr08:005283258 0 W/5283258-5283258 FN848-S Single Base Substitution T-C INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4094-S.SNP.8:5291224 chr08:005291224 0 W/5291224-5291224 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.870696;DP=2964;DP4=1510,1366,11,8;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00269906;MQB=4.66936e-05;MQSB=0.994103;RPB=0.840808;SGB=56.6929;VDB=0.91921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.8:5298573 chr08:005298573 0 W/5298573-5298573 FN3436-S SNP C -> G AC=1;AN=184;BQB=0.733662;DP=3855;DP4=2283,1474,11,15;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.247471;MQB=0.725311;MQSB=1.33568e-40;RPB=0.62341;SGB=20.4984;VDB=0.373065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q1016E|1678|LOC_Os08g09140|protein_coding|CODING|LOC_Os08g09140.1|2|1) FN2128-S.SNP.8:5303829 chr08:005303829 0 W/5303829-5303829 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.0779875;DP=2529;DP4=1048,1447,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0921313;MQB=0.999956;MQSB=0;RPB=0.973613;SGB=-17.9574;VDB=0.82583;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.8:5311826 chr08:005311826 0 W/5311826-5311826 FN662-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g09160 retrotransposon protein, putative, unclassified, expressed SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. 701-3.SNP.8:5320059 chr08:005320059 0 W/5320059-5320059 701-3 Single Base Substitution T-A INTRON HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN3462-S.SNP.8:5328046 chr08:005328046 0 W/5328046-5328046 FN3462-S SNP T -> C AC=2;AN=184;BQB=0.433928;DP=2807;DP4=1351,1347,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.96365e-13;MQSB=0.904618;RPB=0.903167;SGB=56.0583;VDB=0.702328;EFF=UTR_3_PRIME(MODIFIER||49||991|LOC_Os08g09200|protein_coding|CODING|LOC_Os08g09200.1|20|1) FN2175-S.SNP.8:5330419 chr08:005330419 0 W/5330419-5330419 FN2175-S SNP C -> A AC=1;AN=168;BQB=0.00788005;DP=4241;DP4=2066,2140,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.42054e-09;MQSB=0.994107;RPB=0.209547;SGB=-41.7816;VDB=0.537964;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||991|LOC_Os08g09200|protein_coding|CODING|LOC_Os08g09200.1|12|1),INTRON(MODIFIER||||991|LOC_Os08g09200|protein_coding|CODING|LOC_Os08g09200.1|11|1);LOF=(LOC_Os08g09200|LOC_Os08g09200|1|1.00) FN-148.SNP.8:5346066 chr08:005346066 0 W/5346066-5346066 FN-148 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g09220 OsFBX262 - F-box domain containing protein, expressed SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-132.SNP.8:5350265 chr08:005350265 0 W/5350265-5350265 FN-132 Single Base Substitution T-C INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN3877-S.SNP.8:5354360 chr08:005354360 0 W/5354360-5354360 FN3877-S SNP G -> T AC=2;AN=158;BQB=0.996613;DP=2490;DP4=1156,1204,8,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.38882e-13;MQSB=0.780686;RPB=0.223635;SGB=67.7679;VDB=0.323045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D409Y|1861|LOC_Os08g09230|protein_coding|CODING|LOC_Os08g09230.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D409Y|1774|LOC_Os08g09230|protein_coding|CODING|LOC_Os08g09230.2|3|1) FN994-S.SNP.8:5362080 chr08:005362080 0 W/5362080-5362080 FN994-S Single Base Substitution C-T INTRON HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN4098-S.SNP.8:5370164 chr08:005370164 0 W/5370164-5370164 FN4098-S SNP C -> T AC=2;AN=182;BQB=0.993549;DP=2711;DP4=1286,1326,18,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.51791e-19;MQSB=0.959821;RPB=0.361159;SGB=105.845;VDB=0.191086;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.8:5372728 chr08:005372728 0 W/5372728-5372728 FN-227 Single Base Substitution T-G INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN494-S.SNP.8:5376024 chr08:005376024 0 W/5376024-5376024 FN494-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-189.SNP.8:5377270 chr08:005377270 0 W/5377270-5377270 FN-189 Single Base Substitution A-G INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2440.SNP.8:5394581 chr08:005394581 0 W/5394581-5394581 FN2440 SNP C -> T AC=2;AN=200;BQB=0.860752;DP=4631;DP4=2262,2077,30,22;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0;MQB=4.74422e-16;MQSB=0.778078;RPB=0.977938;SGB=177.266;VDB=0.226423;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.8:5402516 chr08:005402516 0 W/5402516-5402516 FN-195 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g09320 YL1 nuclear protein C-terminal domain containing protein, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3369-S.SNP.8:5404626 chr08:005404626 0 W/5404626-5404626 FN3369-S SNP T -> C AC=2;AN=184;BQB=0.859089;DP=3620;DP4=1266,2169,27,28;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.91784e-24;MQSB=0.944968;RPB=0.914991;SGB=5.11395;VDB=0.142774;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.8:5411434 chr08:005411434 0 W/5411434-5411434 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.736198;DP=5261;DP4=2486,2518,10,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=2.21564e-07;MQSB=0.0109274;RPB=0.710168;SGB=37.3004;VDB=0.909273;EFF=INTERGENIC(MODIFIER||||||||||1) FN900-S.SNP.8:5412885 chr08:005412885 0 W/5412885-5412885 FN900-S Single Base Substitution T-G INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN-155.SNP.8:5415538 chr08:005415538 0 W/5415538-5415538 FN-155 Single Base Substitution G-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3297-S.SNP.8:5420540 chr08:005420540 0 W/5420540-5420540 FN3297-S SNP T -> G AC=1;AN=184;BQB=0.99432;DP=2545;DP4=1116,1290,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01164e-06;MQSB=0.988496;RPB=0.989797;SGB=32.2261;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.8:5425612 chr08:005425612 0 W/5425612-5425612 FN1085-S Single Base Substitution T-A INTRON HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3860-S.SNP.8:5427546 chr08:005427546 0 W/5427546-5427546 FN3860-S SNP T -> C AC=1;AN=158;BQB=0.97023;DP=2819;DP4=1266,1460,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0;MQB=0.000312226;MQSB=5.16612e-07;RPB=0.664624;SGB=40.8124;VDB=0.923052;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.8:5428143 chr08:005428143 0 W/5428143-5428143 W607-2-1 Single Base Substitution T-G INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. W7-1-1.SNP.8:5428168 chr08:005428168 0 W/5428168-5428168 W7-1-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN2349.SNP.8:5440550 chr08:005440550 0 W/5440550-5440550 FN2349 SNP C -> A AC=2;AN=192;BQB=0.998386;DP=4688;DP4=2197,2181,15,12;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0;MQB=0.0072736;MQSB=0.00227525;RPB=0.507408;SGB=54.5574;VDB=0.641112;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.8:5455164 chr08:005455164 0 W/5455164-5455164 FN729-S Single Base Substitution C-T INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN795-S.SNP.8:5457049 chr08:005457049 0 W/5457049-5457049 FN795-S Single Base Substitution G-A INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1256-S.SNP.8:5464625 chr08:005464625 0 W/5464625-5464625 FN1256-S Single Base Substitution C-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1200-S.SNP.8:5465877 chr08:005465877 0 W/5465877-5465877 FN1200-S Single Base Substitution G-C INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN4139-S.SNP.8:5467800 chr08:005467800 0 W/5467800-5467800 FN4139-S SNP C -> G AC=1;AN=170;BQB=0.93432;DP=2766;DP4=1201,1483,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.77043e-11;MQSB=0.983387;RPB=0.711981;SGB=70.0854;VDB=0.686705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G502A|976|LOC_Os08g09430|protein_coding|CODING|LOC_Os08g09430.1|1|1) FN995-S.SNP.8:5477280 chr08:005477280 0 W/5477280-5477280 FN995-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g09450 OsFBL41 - F-box domain and LRR containing protein, expressed SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN4260-S.SNP.8:5479074 chr08:005479074 0 W/5479074-5479074 FN4260-S SNP T -> A AC=1;AN=170;BQB=0.976052;DP=2530;DP4=1017,1421,7,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96121e-10;MQSB=0.997686;RPB=0.99307;SGB=74.528;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.8:5479491 chr08:005479491 0 W/5479491-5479491 FN-89 Single Base Substitution A-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN757-S.SNP.8:5484219 chr08:005484219 0 W/5484219-5484219 FN757-S Single Base Substitution T-C INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2531-S.SNP.8:5484824 chr08:005484824 0 W/5484824-5484824 FN2531-S SNP T -> A AC=1;AN=186;BQB=0.928907;DP=3875;DP4=1879,1797,14,14;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.49915e-16;MQSB=0.998541;RPB=0.445521;SGB=90.4807;VDB=0.271193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.8:5490189 chr08:005490189 0 W/5490189-5490189 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.778262;DP=2751;DP4=1244,1418,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.13692e-09;MQSB=0.96677;RPB=0.982032;SGB=84.9167;VDB=0.959273;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.8:5499083 chr08:005499083 0 W/5499083-5499083 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.999998;DP=3174;DP4=1370,1715,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0100819;MQB=0.116034;MQSB=0.98775;RPB=0.683603;SGB=53.6492;VDB=0.799441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1483K|1691|LOC_Os08g09500|protein_coding|CODING|LOC_Os08g09500.1|3|1) FN2166-S.SNP.8:5506033 chr08:005506033 0 W/5506033-5506033 FN2166-S SNP C -> G AC=1;AN=168;BQB=0.237972;DP=1926;DP4=973,853,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000259584;MQSB=0.980796;RPB=0.97316;SGB=10.0307;VDB=0.193383;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.8:5506317 chr08:005506317 0 W/5506317-5506317 FN3363-S SNP G -> T AC=1;AN=184;BQB=0.842239;DP=3322;DP4=1982,1256,15,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.73334e-10;MQSB=0.96836;RPB=0.453368;SGB=35.884;VDB=0.0821525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.8:5506318 chr08:005506318 0 W/5506318-5506318 FN3363-S SNP A -> T AC=1;AN=184;BQB=0.652858;DP=3313;DP4=1932,1220,16,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.03091e-10;MQSB=0.993702;RPB=0.550406;SGB=38.4058;VDB=0.138357;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.8:5519770 chr08:005519770 0 W/5519770-5519770 FN497-S Single Base Substitution T-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN497-S.SNP.8:5519771 chr08:005519771 0 W/5519771-5519771 FN497-S Single Base Substitution A-C INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN454-S.SNP.8:5520983 chr08:005520983 0 W/5520983-5520983 FN454-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. W554-1-1.SNP.8:5521514 chr08:005521514 0 W/5521514-5521514 W554-1-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g09520 transposon protein, putative, unclassified, expressed SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN3850-S.SNP.8:5526941 chr08:005526941 0 W/5526941-5526941 FN3850-S SNP G -> T AC=2;AN=158;BQB=0.713006;DP=2563;DP4=1293,1185,13,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.17283e-08;MQSB=0.966583;RPB=0.87857;SGB=77.6532;VDB=0.496476;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F53L|143|LOC_Os08g09540|protein_coding|CODING|LOC_Os08g09540.1|1|1) FN976-S.SNP.8:5529200 chr08:005529200 0 W/5529200-5529200 FN976-S Single Base Substitution C-T INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN2491.SNP.8:5529812 chr08:005529812 0 W/5529812-5529812 FN2491 SNP C -> T AC=1;AN=200;BQB=0.997687;DP=4894;DP4=2061,2152,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29032e-15;MQSB=0.584734;RPB=0.953002;SGB=-40.4483;VDB=0.23505;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.8:5529995 chr08:005529995 0 W/5529995-5529995 FN912-S Single Base Substitution C-T INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN622-S.SNP.8:5533317 chr08:005533317 0 W/5533317-5533317 FN622-S Single Base Substitution T-A INTRON HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2781-S.SNP.8:5533356 chr08:005533356 0 W/5533356-5533356 FN2781-S SNP C -> T AC=1;AN=186;BQB=0.937077;DP=3677;DP4=1721,1690,17,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.86769e-11;MQSB=0.976711;RPB=0.771963;SGB=17.325;VDB=0.991051;EFF=INTRON(MODIFIER||||708|LOC_Os08g09570|protein_coding|CODING|LOC_Os08g09570.1|2|1) FN3855-S.SNP.8:5534198 chr08:005534198 0 W/5534198-5534198 FN3855-S SNP T -> C AC=1;AN=158;BQB=0.856613;DP=2168;DP4=1039,1074,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.42469e-05;MQSB=0.982058;RPB=0.78627;SGB=33.9591;VDB=0.822117;EFF=INTRON(MODIFIER||||708|LOC_Os08g09570|protein_coding|CODING|LOC_Os08g09570.1|2|1) FN1327-S.SNP.8:5537140 chr08:005537140 0 W/5537140-5537140 FN1327-S Single Base Substitution G-A INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2412.SNP.8:5550492 chr08:005550492 0 W/5550492-5550492 FN2412 SNP T -> C AC=1;AN=200;BQB=0.717207;DP=3859;DP4=2254,1264,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17493e-11;MQSB=0.984016;RPB=0.999938;SGB=32.0901;VDB=0.768444;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.8:5558812 chr08:005558812 0 W/5558812-5558812 FN_789-2-1 Single Base Substitution T-G Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1615-S.SNP.8:5561192 chr08:005561192 0 W/5561192-5561192 FN1615-S Single Base Substitution C-G INTERGENIC Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3694-S.SNP.8:5566366 chr08:005566366 0 W/5566366-5566366 FN3694-S SNP T -> G AC=2;AN=190;BQB=0.681412;DP=3256;DP4=1554,1554,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.23193e-08;MQSB=0.999605;RPB=0.23883;SGB=71.8647;VDB=0.831479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.8:5569840 chr08:005569840 0 W/5569840-5569840 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.120484;DP=3950;DP4=1910,1781,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.72314e-08;MQSB=0.936424;RPB=0.502106;SGB=77.2904;VDB=0.520695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3488-S.SNP.8:5578749 chr08:005578749 0 W/5578749-5578749 FN3488-S SNP T -> C AC=2;AN=184;BQB=0.92596;DP=2934;DP4=1203,1579,7,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.74425e-11;MQSB=0.288033;RPB=0.985467;SGB=75.8731;VDB=0.502855;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.8:5579517 chr08:005579517 0 W/5579517-5579517 FN_935-1 Single Base Substitution C-G Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3725-S.SNP.8:5590274 chr08:005590274 0 W/5590274-5590274 FN3725-S SNP C -> A AC=1;AN=190;BQB=1;DP=2709;DP4=1346,1282,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.68699e-08;MQSB=0.923832;RPB=0.610505;SGB=39.6545;VDB=0.0708043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.8:5592491 chr08:005592491 0 W/5592491-5592491 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.301504;DP=2649;DP4=1412,1093,13,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.81606e-07;MQSB=0.689989;RPB=0.868639;SGB=56.8786;VDB=0.359805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.8:5602387 chr08:005602387 0 W/5602387-5602387 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.92706;DP=2913;DP4=1415,1370,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4918e-08;MQSB=0.934206;RPB=0.681683;SGB=35.7479;VDB=0.797827;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.8:5604104 chr08:005604104 0 W/5604104-5604104 FN-87 Single Base Substitution A-C INTRON HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-227.SNP.8:5616538 chr08:005616538 0 W/5616538-5616538 FN-227 Single Base Substitution G-T INTERGENIC HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN1545-S.SNP.8:5618421 chr08:005618421 0 W/5618421-5618421 FN1545-S Single Base Substitution C-T INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN1545-S.SNP.8:5618435 chr08:005618435 0 W/5618435-5618435 FN1545-S Single Base Substitution A-G INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN-361.SNP.8:5624973 chr08:005624973 0 W/5624973-5624973 FN-361 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g09730 OsFBX273 - F-box domain containing protein, expressed SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN890-S.SNP.8:5626732 chr08:005626732 0 W/5626732-5626732 FN890-S Single Base Substitution T-G INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1379-S.SNP.8:5627081 chr08:005627081 0 W/5627081-5627081 FN1379-S Single Base Substitution C-T INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN4136-S.SNP.8:5629611 chr08:005629611 0 W/5629611-5629611 FN4136-S SNP C -> A AC=1;AN=170;BQB=0.999294;DP=3107;DP4=1291,1754,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.20073e-09;MQSB=0.998834;RPB=0.791985;SGB=65.6427;VDB=0.402501;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A148E|582|LOC_Os08g09740|protein_coding|CODING|LOC_Os08g09740.1|2|1) FN467-S.SNP.8:5633966 chr08:005633966 0 W/5633966-5633966 FN467-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g09750 OsFBL44 - F-box domain and LRR containing protein, expressed SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3629-S.SNP.8:5652305 chr08:005652305 0 W/5652305-5652305 FN3629-S SNP T -> C AC=1;AN=190;BQB=0.987551;DP=3012;DP4=1165,1679,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.8547e-09;MQSB=0.178561;RPB=0.992308;SGB=7.21887;VDB=0.0142656;EFF=INTERGENIC(MODIFIER||||||||||1) FN-41.SNP.8:5659275 chr08:005659275 0 W/5659275-5659275 FN-41 Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN-339.SNP.8:5670420 chr08:005670420 0 W/5670420-5670420 FN-339 Single Base Substitution G-A INTERGENIC HOMO SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN3465-S.SNP.8:5670420 chr08:005670420 0 W/5670420-5670420 FN3465-S SNP G -> A AC=2;AN=184;BQB=0.996166;DP=3346;DP4=1442,1753,31,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.63289e-23;MQSB=0.813387;RPB=0.690763;SGB=144.923;VDB=0.371278;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.8:5670420 chr08:005670420 0 W/5670420-5670420 FN973-S Single Base Substitution G-A INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2788-S.SNP.8:5670931 chr08:005670931 0 W/5670931-5670931 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.964143;DP=4504;DP4=1832,2296,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16275e-15;MQSB=2.70477e-05;RPB=0.183376;SGB=60.4858;VDB=0.503011;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.8:5681750 chr08:005681750 0 W/5681750-5681750 FN890-S Single Base Substitution T-G INTRON HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1617-S.SNP.8:5683258 chr08:005683258 0 W/5683258-5683258 FN1617-S Single Base Substitution C-T INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3637-S.SNP.8:5690097 chr08:005690097 0 W/5690097-5690097 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.576601;DP=2049;DP4=978,828,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000488043;MQB=0.000516712;MQSB=0.0438776;RPB=0.985573;SGB=-17.0991;VDB=0.0545672;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.8:5692404 chr08:005692404 0 W/5692404-5692404 FN-68 Single Base Substitution C-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1270-S.SNP.8:5697275 chr08:005697275 0 W/5697275-5697275 FN1270-S Single Base Substitution G-T INTRON HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3496-S.SNP.8:5706088 chr08:005706088 0 W/5706088-5706088 FN3496-S SNP C -> T AC=2;AN=188;BQB=0.999677;DP=3095;DP4=1570,1239,13,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.46959e-13;MQSB=0.99981;RPB=0.104306;SGB=46.4225;VDB=0.655504;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.8:5710640 chr08:005710640 0 W/5710640-5710640 FN435-S Single Base Substitution T-A INTERGENIC HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN3530-S.SNP.8:5712984 chr08:005712984 0 W/5712984-5712984 FN3530-S SNP T -> A AC=2;AN=188;BQB=0.970706;DP=3715;DP4=1706,1865,25,23;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000538358;MQB=9.51399e-30;MQSB=1.40842e-14;RPB=0.48789;SGB=160;VDB=0.162119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.8:5712985 chr08:005712985 0 W/5712985-5712985 FN3530-S SNP C -> A AC=2;AN=188;BQB=0.960676;DP=3712;DP4=1719,1876,26,23;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000538793;MQB=4.05278e-30;MQSB=6.9736e-15;RPB=0.83653;SGB=163.543;VDB=0.0889578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.8:5716777 chr08:005716777 0 W/5716777-5716777 FN2592-S SNP C -> T AC=2;AN=198;BQB=0.869863;DP=4180;DP4=1938,1996,30,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.40781e-32;MQSB=0.922498;RPB=0.36001;SGB=191.144;VDB=0.380371;EFF=INTRON(MODIFIER||||854|LOC_Os08g09900|protein_coding|CODING|LOC_Os08g09900.1|3|1) FN3598-S.SNP.8:5718966 chr08:005718966 0 W/5718966-5718966 FN3598-S SNP T -> G AC=2;AN=188;BQB=0.516703;DP=3213;DP4=1432,1662,14,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.32371e-19;MQSB=0.999925;RPB=0.927441;SGB=103.307;VDB=0.960249;EFF=UTR_5_PRIME(MODIFIER||1018||854|LOC_Os08g09900|protein_coding|CODING|LOC_Os08g09900.1|1|1) FN302-S.SNP.8:5723407 chr08:005723407 0 W/5723407-5723407 FN302-S Single Base Substitution A-C INTRON HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN492-S.SNP.8:5727026 chr08:005727026 0 W/5727026-5727026 FN492-S Single Base Substitution A-G INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2461.SNP.8:5735107 chr08:005735107 0 W/5735107-5735107 FN2461 SNP A -> T AC=2;AN=200;BQB=0.746009;DP=3832;DP4=1912,1574,10,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07085e-12;MQSB=0.631329;RPB=0.09748;SGB=87.1368;VDB=0.103045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.8:5740774 chr08:005740774 0 W/5740774-5740774 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.645069;DP=4969;DP4=2396,2316,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47545e-14;MQSB=0.999906;RPB=0.688574;SGB=79.9264;VDB=0.993538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.8:5744781 chr08:005744781 0 W/5744781-5744781 FN2734-S SNP A -> C AC=1;AN=200;BQB=0.752912;DP=5377;DP4=2686,2456,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.55488e-13;MQSB=0.733683;RPB=0.441959;SGB=61.9006;VDB=0.235204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.8:5744942 chr08:005744942 0 W/5744942-5744942 FN1666-S SNP G -> A AC=1;AN=188;BQB=0.999921;DP=3873;DP4=2003,1836,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.10304e-09;MQSB=0.998495;RPB=0.939039;SGB=23.5329;VDB=0.984488;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.8:5745158 chr08:005745158 0 W/5745158-5745158 FN754-S Single Base Substitution G-A INTERGENIC HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1032-S.SNP.8:5746637 chr08:005746637 0 W/5746637-5746637 FN1032-S Single Base Substitution A-T INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN554-S.SNP.8:5759021 chr08:005759021 0 W/5759021-5759021 FN554-S Single Base Substitution A-G INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2684-S.SNP.8:5761280 chr08:005761280 0 W/5761280-5761280 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.455267;DP=4776;DP4=2336,2182,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.82284e-11;MQSB=0.988161;RPB=0.795297;SGB=91.1059;VDB=0.525988;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.8:5762893 chr08:005762893 0 W/5762893-5762893 FN-189 Single Base Substitution C-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3838-S.SNP.8:5763547 chr08:005763547 0 W/5763547-5763547 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.995456;DP=2677;DP4=1310,1261,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03661e-06;MQSB=0.822435;RPB=0.996734;SGB=49.0954;VDB=0.261515;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.8:5764625 chr08:005764625 0 W/5764625-5764625 FN_N1-202-3 Single Base Substitution C-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN-237.SNP.8:5770850 chr08:005770850 0 W/5770850-5770850 FN-237 Single Base Substitution A-C INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-278.SNP.8:5787131 chr08:005787131 0 W/5787131-5787131 FN-278 Single Base Substitution C-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-259.SNP.8:5799050 chr08:005799050 0 W/5799050-5799050 FN-259 Single Base Substitution A-G INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2788-S.SNP.8:5802575 chr08:005802575 0 W/5802575-5802575 FN2788-S SNP G -> C AC=1;AN=198;BQB=0.662844;DP=3144;DP4=2028,876,14,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.59823e-10;MQSB=0.401776;RPB=0.814693;SGB=31.9395;VDB=0.69936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.8:5804008 chr08:005804008 0 W/5804008-5804008 FN2706-S SNP T -> A AC=1;AN=200;BQB=0.936794;DP=5058;DP4=2562,2283,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64336e-10;MQSB=0.985522;RPB=0.850054;SGB=54.6902;VDB=0.0656973;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.8:5804276 chr08:005804276 0 W/5804276-5804276 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.805056;DP=2826;DP4=1359,1384,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32875e-08;MQSB=0.913689;RPB=0.643989;SGB=23.2751;VDB=0.469539;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.8:5805900 chr08:005805900 0 W/5805900-5805900 FN_770-6-1 Single Base Substitution T-C HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1136-S.SNP.8:5809060 chr08:005809060 0 W/5809060-5809060 FN1136-S Single Base Substitution G-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1136-S.SNP.8:5809882 chr08:005809882 0 W/5809882-5809882 FN1136-S Single Base Substitution T-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN873-S.SNP.8:5812368 chr08:005812368 0 W/5812368-5812368 FN873-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g10030 KH domain-containing protein, putative, expressed SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2243-S.SNP.8:5812806 chr08:005812806 0 W/5812806-5812806 FN2243-S SNP C -> T AC=2;AN=190;BQB=0.999852;DP=5020;DP4=2252,2415,16,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.37468e-21;MQSB=0.996452;RPB=0.731175;SGB=-0.482811;VDB=0.563562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D353N|454|LOC_Os08g10030|protein_coding|CODING|LOC_Os08g10030.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D353N|441|LOC_Os08g10030|protein_coding|CODING|LOC_Os08g10030.2|7|1) FN-218.SNP.8:5818057 chr08:005818057 0 W/5818057-5818057 FN-218 Single Base Substitution C-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2157-S.SNP.8:5819444 chr08:005819444 0 W/5819444-5819444 FN2157-S SNP A -> T AC=1;AN=168;BQB=0.444717;DP=3809;DP4=1747,2026,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49408e-06;MQSB=0.930581;RPB=0.258951;SGB=22.1847;VDB=0.711884;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.8:5820529 chr08:005820529 0 W/5820529-5820529 FN934-S Single Base Substitution G-A INTERGENIC HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2467.SNP.8:5820597 chr08:005820597 0 W/5820597-5820597 FN2467 SNP C -> T AC=1;AN=200;BQB=0.908738;DP=4506;DP4=1938,2265,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.56622e-07;MQSB=0.916548;RPB=0.757345;SGB=45.0543;VDB=0.889829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.8:5820615 chr08:005820615 0 W/5820615-5820615 FN3860-S SNP G -> T AC=1;AN=158;BQB=0.651062;DP=2346;DP4=931,1287,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.10453e-06;MQSB=0.9757;RPB=0.624686;SGB=-0.652741;VDB=0.821961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2153-S.SNP.8:5837021 chr08:005837021 0 W/5837021-5837021 FN2153-S SNP G -> A AC=1;AN=168;BQB=0.00622162;DP=3997;DP4=1953,2010,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.14027e-05;MQSB=0.857104;RPB=0.981142;SGB=-61.7914;VDB=0.534877;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.8:5837731 chr08:005837731 0 W/5837731-5837731 FN1213-S Single Base Substitution C-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN-65.SNP.8:5843324 chr08:005843324 0 W/5843324-5843324 FN-65 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g10070 protein kinase, putative, expressed SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. W22-2-1.SNP.8:5844023 chr08:005844023 0 W/5844023-5844023 W22-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1718-S.SNP.8:5844797 chr08:005844797 0 W/5844797-5844797 FN1718-S SNP T -> C AC=2;AN=188;BQB=0.0184836;DP=4447;DP4=2335,2048,26,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.84453e-18;MQSB=0.000106322;RPB=0.925519;SGB=58.0102;VDB=0.88424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.8:5847228 chr08:005847228 0 W/5847228-5847228 FN1723-S SNP T -> C AC=1;AN=188;BQB=0.917151;DP=3212;DP4=1462,1707,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8808e-09;MQSB=0.888323;RPB=0.990176;SGB=53.7007;VDB=0.573824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M289V|293|LOC_Os08g10080|protein_coding|CODING|LOC_Os08g10080.1|3|1) FN1286-S.SNP.8:5849579 chr08:005849579 0 W/5849579-5849579 FN1286-S Single Base Substitution C-A INTRON HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1338-S.SNP.8:5856267 chr08:005856267 0 W/5856267-5856267 FN1338-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2554-S.SNP.8:5861407 chr08:005861407 0 W/5861407-5861407 FN2554-S SNP G -> C AC=2;AN=198;BQB=0.819111;DP=4318;DP4=2092,2010,18,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.9054e-18;MQSB=0.463473;RPB=0.821209;SGB=-2.5285;VDB=0.457795;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.8:5862173 chr08:005862173 0 W/5862173-5862173 FN389-S Single Base Substitution C-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN389-S.SNP.8:5862175 chr08:005862175 0 W/5862175-5862175 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3487-S.SNP.8:5867293 chr08:005867293 0 W/5867293-5867293 FN3487-S SNP G -> C AC=1;AN=184;BQB=0.957512;DP=3415;DP4=2002,1309,17,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.31411e-15;MQSB=0.986231;RPB=0.0939969;SGB=51.0148;VDB=0.0320778;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.8:5873310 chr08:005873310 0 W/5873310-5873310 FN685-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g10120 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3738-S.SNP.8:5874842 chr08:005874842 0 W/5874842-5874842 FN3738-S SNP C -> T AC=1;AN=190;BQB=0.973742;DP=1942;DP4=857,998,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81359e-08;MQSB=0.908363;RPB=0.997427;SGB=43.2083;VDB=0.644387;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.8:5875249 chr08:005875249 0 W/5875249-5875249 FN453-S Single Base Substitution T-C INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2692-S.SNP.8:5877772 chr08:005877772 0 W/5877772-5877772 FN2692-S SNP A -> G AC=1;AN=200;BQB=0.895152;DP=4869;DP4=2603,1910,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34556e-13;MQSB=0.878314;RPB=0.941222;SGB=17.5158;VDB=0.0376734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.8:5878831 chr08:005878831 0 W/5878831-5878831 FN1317-S Single Base Substitution G-T INTRON HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN951-S.SNP.8:5881609 chr08:005881609 0 W/5881609-5881609 FN951-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g10140 retrotransposon protein, putative, unclassified, expressed SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3538-S.SNP.8:5886995 chr08:005886995 0 W/5886995-5886995 FN3538-S SNP C -> T AC=2;AN=188;BQB=0.153981;DP=2908;DP4=1250,1378,14,14;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.33036e-09;MQSB=0.891364;RPB=0.22532;SGB=-73.5561;VDB=0.628406;EFF=INTRON(MODIFIER||||854|LOC_Os08g10150|protein_coding|CODING|LOC_Os08g10150.1|3|1) FN-148.SNP.8:5887111 chr08:005887111 0 W/5887111-5887111 FN-148 Single Base Substitution A-C INTRON HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. W450-6-1.SNP.8:5887298 chr08:005887298 0 W/5887298-5887298 W450-6-1 Single Base Substitution A-T INTRON HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1660-S.SNP.8:5889593 chr08:005889593 0 W/5889593-5889593 FN1660-S Single Base Substitution T-C INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3798-S.SNP.8:5889637 chr08:005889637 0 W/5889637-5889637 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.332433;DP=2674;DP4=1219,1367,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00120616;MQSB=0.969352;RPB=0.998939;SGB=39.9877;VDB=0.144519;EFF=INTRON(MODIFIER||||854|LOC_Os08g10150|protein_coding|CODING|LOC_Os08g10150.1|7|1) FN3057-S.SNP.8:5891242 chr08:005891242 0 W/5891242-5891242 FN3057-S SNP G -> T AC=2;AN=184;BQB=0.948522;DP=2360;DP4=863,1415,4,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.35127e-10;MQSB=0.574717;RPB=0.800796;SGB=80.3949;VDB=0.0410456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E482D|854|LOC_Os08g10150|protein_coding|CODING|LOC_Os08g10150.1|13|1) FN406-S.SNP.8:5894043 chr08:005894043 0 W/5894043-5894043 FN406-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN3452-S.SNP.8:5900768 chr08:005900768 0 W/5900768-5900768 FN3452-S SNP G -> T AC=1;AN=184;BQB=0.977319;DP=2967;DP4=1313,1573,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74453e-07;MQSB=0.969102;RPB=0.414546;SGB=35.7479;VDB=0.394235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.8:5901169 chr08:005901169 0 W/5901169-5901169 FN2107-S SNP A -> C AC=1;AN=168;BQB=0.629239;DP=3022;DP4=1415,1578,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.90953e-10;MQSB=0.199034;RPB=0.888346;SGB=-16.2342;VDB=0.0960125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.8:5903759 chr08:005903759 0 W/5903759-5903759 FN3842-S SNP G -> T AC=1;AN=190;BQB=0.891448;DP=3202;DP4=1480,1628,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.3359e-13;MQSB=0.920294;RPB=0.522531;SGB=85.5263;VDB=0.514891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q125K|704|LOC_Os08g10180|protein_coding|CODING|LOC_Os08g10180.1|1|1) FN1197-S.SNP.8:5904273 chr08:005904273 0 W/5904273-5904273 FN1197-S Single Base Substitution C-T INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3849-S.SNP.8:5910350 chr08:005910350 0 W/5910350-5910350 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.995865;DP=3098;DP4=1379,1600,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0.0593932;MQB=0.00214984;MQSB=0.0186493;RPB=0.934164;SGB=21.4493;VDB=0.450579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A619V|1224|LOC_Os08g10190|protein_coding|CODING|LOC_Os08g10190.1|3|1) FN3503-S.SNP.8:5911420 chr08:005911420 0 W/5911420-5911420 FN3503-S SNP A -> G AC=1;AN=188;BQB=0.949732;DP=3049;DP4=1333,1648,1,11;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0367334;MQB=0.0189655;MQSB=1.15107e-19;RPB=0.58735;SGB=32.441;VDB=0.0374864;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V262|1224|LOC_Os08g10190|protein_coding|CODING|LOC_Os08g10190.1|3|1) FN3663-S.SNP.8:5912234 chr08:005912234 0 W/5912234-5912234 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.0631669;DP=2336;DP4=1400,853,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00214041;MQB=0.00763781;MQSB=0.999774;RPB=0.589353;SGB=32.5467;VDB=0.562103;EFF=INTRON(MODIFIER||||1224|LOC_Os08g10190|protein_coding|CODING|LOC_Os08g10190.1|1|1) FN-54.SNP.8:5912367 chr08:005912367 0 W/5912367-5912367 FN-54 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2358.SNP.8:5912682 chr08:005912682 0 W/5912682-5912682 FN2358 SNP A -> T AC=1;AN=192;BQB=0.18862;DP=5133;DP4=2493,2427,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00233781;MQB=0.000173958;MQSB=0.382042;RPB=0.947892;SGB=10.9636;VDB=0.940371;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.8:5913693 chr08:005913693 0 W/5913693-5913693 FN404-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g10200 retrotransposon protein, putative, unclassified SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3935-S.SNP.8:5914958 chr08:005914958 0 W/5914958-5914958 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.70821;DP=2772;DP4=1234,1228,56,143;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.0847763;MQB=0;MQSB=1.23233e-09;RPB=0.000697299;SGB=-1686.43;VDB=4.89325e-17;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.8:5916606 chr08:005916606 0 W/5916606-5916606 FN1631-S Single Base Substitution G-C INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN782-S.SNP.8:5918063 chr08:005918063 0 W/5918063-5918063 FN782-S Single Base Substitution C-G INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN3779-S.SNP.8:5923384 chr08:005923384 0 W/5923384-5923384 FN3779-S SNP G -> A AC=1;AN=190;BQB=0.518631;DP=2366;DP4=1030,1211,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00144661;MQSB=0.999881;RPB=0.562615;SGB=25.439;VDB=0.726254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.8:5925673 chr08:005925673 0 W/5925673-5925673 FN1089-S Single Base Substitution T-G INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2658-S.SNP.8:5927471 chr08:005927471 0 W/5927471-5927471 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.336277;DP=4451;DP4=2161,1834,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.64173e-13;MQSB=0.737072;RPB=0.486889;SGB=114.132;VDB=0.492229;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.8:5927713 chr08:005927713 0 W/5927713-5927713 FN-366 Single Base Substitution G-T INTERGENIC HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1045-S.SNP.8:5929047 chr08:005929047 0 W/5929047-5929047 FN1045-S Single Base Substitution C-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN3653-S.SNP.8:5931850 chr08:005931850 0 W/5931850-5931850 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.899922;DP=3011;DP4=1513,1381,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0149452;MQB=7.80013e-05;MQSB=0.627455;RPB=0.93964;SGB=49.0954;VDB=0.216658;EFF=INTRON(MODIFIER||||492|LOC_Os08g10220|protein_coding|CODING|LOC_Os08g10220.1|2|1) FN2181-S.SNP.8:5933665 chr08:005933665 0 W/5933665-5933665 FN2181-S SNP G -> T AC=1;AN=190;BQB=0.415775;DP=5002;DP4=2180,2462,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.229508;MQB=0.713651;MQSB=3.60389e-11;RPB=0.773123;SGB=-9.89872;VDB=0.897851;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S60|573|LOC_Os08g10230|protein_coding|CODING|LOC_Os08g10230.1|2|1) FN3914-S.SNP.8:5937658 chr08:005937658 0 W/5937658-5937658 FN3914-S SNP G -> A AC=2;AN=158;BQB=0.902271;DP=2468;DP4=1095,1294,5,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.22109e-08;MQSB=0.894734;RPB=0.152437;SGB=51.4366;VDB=0.453757;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:5937785 chr08:005937785 0 W/5937785-5937785 FN3696-S SNP A -> G AC=1;AN=190;BQB=0.31962;DP=2990;DP4=1474,1403,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.13054e-08;MQSB=0.993632;RPB=0.289287;SGB=31.3213;VDB=0.703086;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.8:5946526 chr08:005946526 0 W/5946526-5946526 FN1020-S Single Base Substitution T-C INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN712-S.SNP.8:5947716 chr08:005947716 0 W/5947716-5947716 FN712-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1121-S.SNP.8:5947906 chr08:005947906 0 W/5947906-5947906 FN1121-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3598-S.SNP.8:5948874 chr08:005948874 0 W/5948874-5948874 FN3598-S SNP A -> C AC=2;AN=188;BQB=0.994942;DP=2817;DP4=1349,1372,16,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.73999e-21;MQSB=0.964818;RPB=0.60069;SGB=162.561;VDB=0.339257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cCa|Q382P|655|LOC_Os08g10244|protein_coding|CODING|LOC_Os08g10244.1|2|1),INTRAGENIC(MODIFIER|||||LOC_Os08g10250||CODING|||1) FN3802-S.SNP.8:5951114 chr08:005951114 0 W/5951114-5951114 FN3802-S SNP C -> A AC=1;AN=190;BQB=0.932849;DP=3031;DP4=1714,1195,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13537e-10;MQSB=0.999974;RPB=0.883874;SGB=33.8752;VDB=0.30899;EFF=INTRON(MODIFIER||||655|LOC_Os08g10244|protein_coding|CODING|LOC_Os08g10244.1|2|1),INTRAGENIC(MODIFIER|||||LOC_Os08g10250||CODING|||1) FN2771-S.SNP.8:5953356 chr08:005953356 0 W/5953356-5953356 FN2771-S SNP C -> T AC=1;AN=188;BQB=0.424831;DP=3396;DP4=1657,1585,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11249e-09;MQSB=0.880687;RPB=0.99713;SGB=63.3342;VDB=0.642606;EFF=UTR_5_PRIME(MODIFIER||1569||280|LOC_Os08g10250|protein_coding|CODING|LOC_Os08g10250.1|4|1),UTR_3_PRIME(MODIFIER||3659||655|LOC_Os08g10244|protein_coding|CODING|LOC_Os08g10244.1|7|1) FN713-S.SNP.8:5975918 chr08:005975918 0 W/5975918-5975918 FN713-S Single Base Substitution T-C INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3780-S.SNP.8:5976025 chr08:005976025 0 W/5976025-5976025 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.980883;DP=2459;DP4=1459,925,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.85639e-06;MQSB=0.461681;RPB=0.437307;SGB=35.4339;VDB=0.0329857;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A90|101|LOC_Os08g10280|protein_coding|CODING|LOC_Os08g10280.1|1|1) FN2338.SNP.8:5978753 chr08:005978753 0 W/5978753-5978753 FN2338 SNP T -> C AC=1;AN=192;BQB=0.95263;DP=4119;DP4=1911,2020,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.000783921;MQSB=0.0979271;RPB=0.867141;SGB=62.9035;VDB=0.899764;EFF=INTERGENIC(MODIFIER||||||||||1) W706-3-1.SNP.8:5979375 chr08:005979375 0 W/5979375-5979375 W706-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3971-S.SNP.8:5982331 chr08:005982331 0 W/5982331-5982331 FN3971-S SNP A -> T AC=2;AN=168;BQB=0.987638;DP=3262;DP4=1642,1514,16,11;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=2.80344e-08;MQSB=0.0128835;RPB=0.999603;SGB=114.204;VDB=0.821735;EFF=INTRON(MODIFIER||||995|LOC_Os08g10290|protein_coding|CODING|LOC_Os08g10290.1|1|1) FN3673-S.SNP.8:5997779 chr08:005997779 0 W/5997779-5997779 FN3673-S SNP C -> G AC=1;AN=190;BQB=0.961465;DP=2509;DP4=1426,985,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=3.88981e-07;MQSB=0.0752161;RPB=0.731439;SGB=71.8647;VDB=0.19277;EFF=INTERGENIC(MODIFIER||||||||||1) FN3095-S.SNP.8:6006970 chr08:006006970 0 W/6006970-6006970 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.998006;DP=2538;DP4=1117,1330,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.05776e-06;MQSB=0.837185;RPB=0.27667;SGB=39.2697;VDB=0.320956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A2V|79|LOC_Os08g10304|protein_coding|CODING|LOC_Os08g10304.1|1|1) W464-2-1.SNP.8:6013088 chr08:006013088 0 W/6013088-6013088 W464-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2676-S.SNP.8:6013372 chr08:006013372 0 W/6013372-6013372 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.997382;DP=4703;DP4=2066,2336,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.35335e-13;MQSB=0.654583;RPB=0.751776;SGB=76.3213;VDB=0.631784;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.8:6031419 chr08:006031419 0 W/6031419-6031419 FN-225 Single Base Substitution C-G INTERGENIC HOMO SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-262.SNP.8:6031419 chr08:006031419 0 W/6031419-6031419 FN-262 Single Base Substitution C-G INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-63.SNP.8:6031419 chr08:006031419 0 W/6031419-6031419 FN-63 Single Base Substitution C-G INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1280-S.SNP.8:6031419 chr08:006031419 0 W/6031419-6031419 FN1280-S Single Base Substitution C-G INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN631-S.SNP.8:6031419 chr08:006031419 0 W/6031419-6031419 FN631-S Single Base Substitution C-G INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN553-S.SNP.8:6039042 chr08:006039042 0 W/6039042-6039042 FN553-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN982-S.SNP.8:6040193 chr08:006040193 0 W/6040193-6040193 FN982-S Single Base Substitution A-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN596-S.SNP.8:6044015 chr08:006044015 0 W/6044015-6044015 FN596-S Single Base Substitution C-G INTRON HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2620-S.SNP.8:6051057 chr08:006051057 0 W/6051057-6051057 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.875283;DP=3453;DP4=1326,1916,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.10409e-07;MQSB=2.22189e-07;RPB=0.987793;SGB=63.3342;VDB=0.0504127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.8:6051423 chr08:006051423 0 W/6051423-6051423 FN3770-S SNP T -> C AC=1;AN=190;BQB=0.973103;DP=2173;DP4=925,919,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.97332e-08;MQSB=0.88647;RPB=0.989106;SGB=-15.9914;VDB=0.525751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.8:6052626 chr08:006052626 0 W/6052626-6052626 FN2588-S SNP T -> C AC=1;AN=198;BQB=0.966448;DP=4054;DP4=2306,1511,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00148002;MQB=4.24917e-05;MQSB=0.164406;RPB=0.713547;SGB=39.7248;VDB=0.0540854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.8:6054575 chr08:006054575 0 W/6054575-6054575 FN1633-S Single Base Substitution G-C INTERGENIC Homo SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN-186.SNP.8:6074954 chr08:006074954 0 W/6074954-6074954 FN-186 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g10360 retrotransposon protein, putative, unclassified, expressed SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-278.SNP.8:6083102 chr08:006083102 0 W/6083102-6083102 FN-278 Single Base Substitution G-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2536-S.SNP.8:6096031 chr08:006096031 0 W/6096031-6096031 FN2536-S SNP G -> T AC=1;AN=198;BQB=0.980178;DP=4090;DP4=2001,1823,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000488998;MQB=1.30475e-05;MQSB=0.505514;RPB=0.982745;SGB=31.9395;VDB=0.759626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.8:6096116 chr08:006096116 0 W/6096116-6096116 FN2447 SNP C -> T AC=2;AN=200;BQB=0.895365;DP=4808;DP4=2267,2235,32,29;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.64447e-21;MQSB=1;RPB=0.981287;SGB=144.112;VDB=0.467385;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.8:6097224 chr08:006097224 0 W/6097224-6097224 FN545-S Single Base Substitution C-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3917-S.SNP.8:6107149 chr08:006107149 0 W/6107149-6107149 FN3917-S SNP T -> C AC=2;AN=158;BQB=0.994887;DP=2812;DP4=1544,1109,21,17;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=2.07955e-14;MQSB=0.00168251;RPB=0.714432;SGB=75.9465;VDB=0.141044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.8:6108735 chr08:006108735 0 W/6108735-6108735 FN3326-S SNP C -> G AC=1;AN=184;BQB=0.996735;DP=3741;DP4=2154,1430,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98204e-14;MQSB=0.889502;RPB=0.947324;SGB=53.5365;VDB=0.332899;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.8:6115483 chr08:006115483 0 W/6115483-6115483 FN629-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g10410 expressed protein SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN835-S.SNP.8:6115934 chr08:006115934 0 W/6115934-6115934 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN3679-S.SNP.8:6119525 chr08:006119525 0 W/6119525-6119525 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.473636;DP=2598;DP4=1319,1074,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00153965;MQB=0.000119897;MQSB=0.000240775;RPB=0.885924;SGB=32.5467;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.8:6122885 chr08:006122885 0 W/6122885-6122885 FN4083-S SNP C -> T AC=2;AN=182;BQB=0.783002;DP=2874;DP4=1415,1357,18,22;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=3.65289e-09;MQSB=0.985866;RPB=0.838449;SGB=174.926;VDB=0.760042;EFF=INTRON(MODIFIER||||458|LOC_Os08g10420|protein_coding|CODING|LOC_Os08g10420.1|1|1) FN476-S.SNP.8:6122885 chr08:006122885 0 W/6122885-6122885 FN476-S Single Base Substitution C-T INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN875-S.SNP.8:6122885 chr08:006122885 0 W/6122885-6122885 FN875-S Single Base Substitution C-T INTRON HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN935-S.SNP.8:6122885 chr08:006122885 0 W/6122885-6122885 FN935-S Single Base Substitution C-T INTRON HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN1520-S.SNP.8:6124980 chr08:006124980 0 W/6124980-6124980 FN1520-S Single Base Substitution T-C INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN_814-7-1.SNP.8:6136099 chr08:006136099 0 W/6136099-6136099 FN_814-7-1 Single Base Substitution T-A Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2589-S.SNP.8:6158408 chr08:006158408 0 W/6158408-6158408 FN2589-S SNP C -> A AC=1;AN=190;BQB=0.586812;DP=4024;DP4=1630,2117,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000248509;MQB=6.5786e-06;MQSB=0.807951;RPB=0.925007;SGB=35.7638;VDB=0.676899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1713-S.SNP.8:6159750 chr08:006159750 0 W/6159750-6159750 FN1713-S SNP G -> A AC=1;AN=188;BQB=0.262892;DP=2791;DP4=1789,959,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31466e-05;MQSB=0.507284;RPB=0.945413;SGB=7.0815;VDB=0.528391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.8:6166762 chr08:006166762 0 W/6166762-6166762 FN2454 SNP A -> T AC=1;AN=200;BQB=0.978436;DP=4955;DP4=2266,2479,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89582e-14;MQSB=0.919658;RPB=0.986766;SGB=50.3263;VDB=0.913528;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.8:6175025 chr08:006175025 0 W/6175025-6175025 FN4112-S SNP G -> A AC=1;AN=182;BQB=0.860155;DP=2873;DP4=1256,1543,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.88566e-10;MQSB=0.974504;RPB=0.822017;SGB=71.1765;VDB=0.827409;EFF=UTR_5_PRIME(MODIFIER||293||448|LOC_Os08g10510|protein_coding|CODING|LOC_Os08g10510.2|1|1),INTRON(MODIFIER||||510|LOC_Os08g10510|protein_coding|CODING|LOC_Os08g10510.1|1|1) FN1459-S.SNP.8:6182936 chr08:006182936 0 W/6182936-6182936 FN1459-S Single Base Substitution A-G INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN1029-S.SNP.8:6183119 chr08:006183119 0 W/6183119-6183119 FN1029-S Single Base Substitution C-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2474.SNP.8:6183763 chr08:006183763 0 W/6183763-6183763 FN2474 SNP G -> A AC=1;AN=200;BQB=0.863334;DP=4777;DP4=2311,2110,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91122e-13;MQSB=0.62242;RPB=0.975068;SGB=65.5058;VDB=0.545558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.8:6188870 chr08:006188870 0 W/6188870-6188870 FN3373-S SNP G -> T AC=2;AN=184;BQB=0.958281;DP=2981;DP4=1254,1640,8,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.49922e-11;MQSB=0.739026;RPB=0.984004;SGB=93.9603;VDB=0.495748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.8:6191888 chr08:006191888 0 W/6191888-6191888 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.910601;DP=2829;DP4=1261,1495,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.51355e-07;MQSB=0.900127;RPB=0.799167;SGB=39.9877;VDB=0.698224;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q394*|562|LOC_Os08g10540|protein_coding|CODING|LOC_Os08g10540.1|3|1);LOF=(LOC_Os08g10540|LOC_Os08g10540|1|1.00);NMD=(LOC_Os08g10540|LOC_Os08g10540|1|1.00) FN322-S.SNP.8:6196550 chr08:006196550 0 W/6196550-6196550 FN322-S Single Base Substitution G-C INTERGENIC HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN1514-S.SNP.8:6205969 chr08:006205969 0 W/6205969-6205969 FN1514-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3663-S.SNP.8:6233498 chr08:006233498 0 W/6233498-6233498 FN3663-S SNP T -> A AC=1;AN=190;BQB=0.98582;DP=2847;DP4=1291,1317,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15217e-06;MQSB=0.994464;RPB=0.421647;SGB=18.552;VDB=0.711694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Atc|F412I|468|LOC_Os08g10590|protein_coding|CODING|LOC_Os08g10590.1|1|1) FN1764-S.SNP.8:6233874 chr08:006233874 0 W/6233874-6233874 FN1764-S SNP A -> T AC=1;AN=188;BQB=0.1488;DP=3956;DP4=2096,1827,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57009e-06;MQSB=0.99113;RPB=0.883598;SGB=23.5329;VDB=0.981253;EFF=UTR_3_PRIME(MODIFIER||203||468|LOC_Os08g10590|protein_coding|CODING|LOC_Os08g10590.1|1|1) FN2711-S.SNP.8:6236307 chr08:006236307 0 W/6236307-6236307 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.571031;DP=5118;DP4=2318,2482,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33597e-13;MQSB=1;RPB=0.572728;SGB=79.9264;VDB=0.207266;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.8:6245698 chr08:006245698 0 W/6245698-6245698 FN933-S Single Base Substitution T-C INTRON HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3950-S.SNP.8:6253784 chr08:006253784 0 W/6253784-6253784 FN3950-S SNP T -> C AC=2;AN=168;BQB=0.352343;DP=2872;DP4=1472,1267,19,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61978e-16;MQSB=0.982271;RPB=0.870631;SGB=32.807;VDB=0.554989;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.8:6258402 chr08:006258402 0 W/6258402-6258402 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.000590814;DP=4043;DP4=1453,2008,20,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.0904e-09;MQSB=0.978574;RPB=0.96906;SGB=-267.86;VDB=0.128416;EFF=INTERGENIC(MODIFIER||||||||||1) FN-145.SNP.8:6269574 chr08:006269574 0 W/6269574-6269574 FN-145 Single Base Substitution G-A INTRON HOMO SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3057-S.SNP.8:6271207 chr08:006271207 0 W/6271207-6271207 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.506538;DP=3123;DP4=1658,1395,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91062e-08;MQSB=0.986056;RPB=0.994173;SGB=42.7914;VDB=0.35206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.8:6273689 chr08:006273689 0 W/6273689-6273689 FN2124-S SNP T -> A AC=1;AN=168;BQB=0.194375;DP=4377;DP4=2092,2227,18,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.41943e-17;MQSB=0.880424;RPB=0.388494;SGB=68.3702;VDB=0.638023;EFF=INTRON(MODIFIER||||437|LOC_Os08g10649|protein_coding|CODING|LOC_Os08g10649.1|1|1) FN2758-S.SNP.8:6279818 chr08:006279818 0 W/6279818-6279818 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.86888;DP=4381;DP4=2214,1951,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01004e-06;MQSB=0.998775;RPB=0.215914;SGB=25.849;VDB=0.309361;EFF=INTRON(MODIFIER||||437|LOC_Os08g10649|protein_coding|CODING|LOC_Os08g10649.1|6|1) FN2224-S.SNP.8:6280808 chr08:006280808 0 W/6280808-6280808 FN2224-S SNP G -> C AC=1;AN=190;BQB=0.787311;DP=5267;DP4=2434,2514,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.87906e-13;MQSB=0.951311;RPB=0.869648;SGB=78.7471;VDB=0.28861;EFF=UTR_3_PRIME(MODIFIER||530||437|LOC_Os08g10649|protein_coding|CODING|LOC_Os08g10649.1|9|1) FN2282.SNP.8:6300109 chr08:006300109 0 W/6300109-6300109 FN2282 SNP A -> C AC=1;AN=192;BQB=0.787633;DP=5166;DP4=2233,2544,23,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.60559e-23;MQSB=0.984206;RPB=0.141025;SGB=48.0279;VDB=0.299353;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.8:6306647 chr08:006306647 0 W/6306647-6306647 FN405-S Single Base Substitution C-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1031-S.SNP.8:6307654 chr08:006307654 0 W/6307654-6307654 FN1031-S Single Base Substitution C-A INTRON HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN967-S.SNP.8:6310129 chr08:006310129 0 W/6310129-6310129 FN967-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g10710 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN4314-S.SNP.8:6311047 chr08:006311047 0 W/6311047-6311047 FN4314-S SNP T -> C AC=1;AN=170;BQB=0.941025;DP=2673;DP4=1496,1112,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0164609;MQB=0.766996;MQSB=0.555423;RPB=0.844396;SGB=52.3148;VDB=0.345514;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q65R|1150|LOC_Os08g10710|protein_coding|CODING|LOC_Os08g10710.1|1|1) FN2305.SNP.8:6319200 chr08:006319200 0 W/6319200-6319200 FN2305 SNP A -> G AC=1;AN=192;BQB=0.0993994;DP=4436;DP4=1935,1652,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000676285;MQB=7.6921e-10;MQSB=0.000525741;RPB=0.501116;SGB=-261.034;VDB=0.0900018;EFF=UTR_5_PRIME(MODIFIER||602||828|LOC_Os08g10740|protein_coding|CODING|LOC_Os08g10740.1|1|1),UTR_5_PRIME(MODIFIER||602||828|LOC_Os08g10740|protein_coding|CODING|LOC_Os08g10740.2|1|1) FN900-S.SNP.8:6321438 chr08:006321438 0 W/6321438-6321438 FN900-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g10740 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN1725-S.SNP.8:6327740 chr08:006327740 0 W/6327740-6327740 FN1725-S SNP T -> C AC=1;AN=188;BQB=0.296405;DP=2623;DP4=794,1794,6,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0171559;MQB=7.40721e-10;MQSB=0.098884;RPB=0.680625;SGB=14.798;VDB=0.751108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-290.SNP.8:6331188 chr08:006331188 0 W/6331188-6331188 FN-290 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g10770 retrotransposon protein, putative, unclassified, expressed SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2462.SNP.8:6333852 chr08:006333852 0 W/6333852-6333852 FN2462 SNP G -> T AC=1;AN=200;BQB=0.93038;DP=4672;DP4=2178,2247,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37775e-05;MQSB=0.973377;RPB=0.997615;SGB=40.4492;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.8:6338575 chr08:006338575 0 W/6338575-6338575 FN3375-S SNP T -> C AC=1;AN=184;BQB=0.385834;DP=2751;DP4=1365,1299,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.99516e-06;MQSB=0.990963;RPB=0.439592;SGB=44.2207;VDB=0.841615;EFF=UTR_3_PRIME(MODIFIER||1018||417|LOC_Os08g10780|protein_coding|CODING|LOC_Os08g10780.1|3|1) FN2114-S.SNP.8:6339203 chr08:006339203 0 W/6339203-6339203 FN2114-S SNP A -> T AC=2;AN=168;BQB=0.834044;DP=3925;DP4=2097,1770,22,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.52885e-19;MQSB=0.867696;RPB=0.894297;SGB=-50.8886;VDB=0.0509586;EFF=INTRON(MODIFIER||||417|LOC_Os08g10780|protein_coding|CODING|LOC_Os08g10780.1|5|1) FN2417.SNP.8:6342831 chr08:006342831 0 W/6342831-6342831 FN2417 SNP T -> C AC=1;AN=200;BQB=0.993159;DP=7566;DP4=3152,3361,15,15;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0795665;MQB=0.674972;MQSB=0.0004892;RPB=0.995379;SGB=-144.249;VDB=0.412695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1275-S.SNP.8:6350739 chr08:006350739 0 W/6350739-6350739 FN1275-S Single Base Substitution A-C INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN1414-S.SNP.8:6351250 chr08:006351250 0 W/6351250-6351250 FN1414-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1520-S.SNP.8:6352954 chr08:006352954 0 W/6352954-6352954 FN1520-S Single Base Substitution T-C INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3556-S.SNP.8:6354866 chr08:006354866 0 W/6354866-6354866 FN3556-S SNP G -> A AC=1;AN=188;BQB=0.763775;DP=4073;DP4=2109,1824,23,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00589246;MQB=2.31281e-17;MQSB=0.51663;RPB=0.996555;SGB=121.023;VDB=0.449246;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.8:6359561 chr08:006359561 0 W/6359561-6359561 FN3667-S SNP G -> C AC=2;AN=190;BQB=0.999941;DP=3136;DP4=1415,1557,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.91726e-13;MQSB=0.942407;RPB=0.280159;SGB=64.5316;VDB=0.0604443;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.8:6366967 chr08:006366967 0 W/6366967-6366967 FN1445-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN-80.SNP.8:6370117 chr08:006370117 0 W/6370117-6370117 FN-80 Single Base Substitution C-T INTERGENIC HOMO SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN1452-S.SNP.8:6371845 chr08:006371845 0 W/6371845-6371845 FN1452-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g10820 retrotransposon, putative, centromere-specific, expressed SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3934-S.SNP.8:6372384 chr08:006372384 0 W/6372384-6372384 FN3934-S SNP C -> T AC=2;AN=158;BQB=0.996183;DP=2208;DP4=852,1237,13,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.26649e-13;MQSB=0.00641051;RPB=0.993829;SGB=-12.4741;VDB=0.680692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.8:6373682 chr08:006373682 0 W/6373682-6373682 FN2312 SNP A -> T AC=1;AN=192;BQB=0.0615502;DP=2913;DP4=806,1647,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.143151;MQB=0.936695;MQSB=0;RPB=0.857362;SGB=1.09742;VDB=0.785478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.8:6377471 chr08:006377471 0 W/6377471-6377471 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN937-S.SNP.8:6377666 chr08:006377666 0 W/6377666-6377666 FN937-S Single Base Substitution C-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2386.SNP.8:6379182 chr08:006379182 0 W/6379182-6379182 FN2386 SNP G -> C AC=1;AN=192;BQB=0.920893;DP=8556;DP4=4373,3730,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.0689575;MQB=0.170377;MQSB=4.82218e-15;RPB=0.685221;SGB=26.127;VDB=0.350816;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.8:6380190 chr08:006380190 0 W/6380190-6380190 FN441-S Single Base Substitution A-C INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3749-S.SNP.8:6382353 chr08:006382353 0 W/6382353-6382353 FN3749-S SNP T -> G AC=2;AN=190;BQB=0.916998;DP=2813;DP4=1260,1417,14,14;HOB=0.020831;ICB=0.494793;MQ=26;MQ0F=0.225382;MQB=0.976764;MQSB=0.000192335;RPB=0.995522;SGB=89.4087;VDB=0.540483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.8:6384599 chr08:006384599 0 W/6384599-6384599 FN3712-S SNP T -> A AC=1;AN=190;BQB=0.998785;DP=1707;DP4=772,650,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.72268e-07;MQSB=0.702735;RPB=0.215842;SGB=-14.3297;VDB=0.00478255;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.8:6390334 chr08:006390334 0 W/6390334-6390334 FN1430-S Single Base Substitution C-T INTRON HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3444-S.SNP.8:6391343 chr08:006391343 0 W/6391343-6391343 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.973976;DP=3122;DP4=1383,1650,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.83669e-07;MQSB=0.965989;RPB=0.900443;SGB=32.2261;VDB=0.400793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.8:6393009 chr08:006393009 0 W/6393009-6393009 FN3540-S SNP C -> T AC=1;AN=188;BQB=0.419103;DP=2952;DP4=1583,1312,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.60334e-05;MQSB=0.99818;RPB=0.451537;SGB=28.8977;VDB=0.280152;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.8:6396211 chr08:006396211 0 W/6396211-6396211 FN1748-S SNP C -> G AC=2;AN=188;BQB=0.952763;DP=3401;DP4=1787,1549,16,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.86648e-22;MQSB=0.954168;RPB=0.780187;SGB=0.755789;VDB=0.724839;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.8:6399989 chr08:006399989 0 W/6399989-6399989 FN1509-S Single Base Substitution C-T INTRON HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2797-S.SNP.8:6406075 chr08:006406075 0 W/6406075-6406075 FN2797-S SNP A -> T AC=1;AN=186;BQB=0.86987;DP=4162;DP4=1958,2018,9,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.28905e-09;MQSB=0.813256;RPB=0.567468;SGB=43.7442;VDB=0.232431;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.8:6409222 chr08:006409222 0 W/6409222-6409222 FN-82 Single Base Substitution C-T INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2674-S.SNP.8:6410769 chr08:006410769 0 W/6410769-6410769 FN2674-S SNP G -> T AC=1;AN=200;BQB=0.914785;DP=2347;DP4=165,1994,1,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95692e-07;MQSB=8.11712e-22;RPB=0.55832;SGB=54.2646;VDB=0.718513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.8:6414532 chr08:006414532 0 W/6414532-6414532 FN2463 SNP C -> T AC=1;AN=200;BQB=0.124686;DP=4754;DP4=2012,2383,12,7;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0212453;MQB=0.498214;MQSB=0.344721;RPB=0.770699;SGB=34.6953;VDB=0.683045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.8:6422563 chr08:006422563 0 W/6422563-6422563 FN1104-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g10890 retrotransposon, putative, centromere-specific, expressed SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN-327.SNP.8:6423652 chr08:006423652 0 W/6423652-6423652 FN-327 Single Base Substitution A-G INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN915-S.SNP.8:6426513 chr08:006426513 0 W/6426513-6426513 FN915-S Single Base Substitution C-A INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3935-S.SNP.8:6427616 chr08:006427616 0 W/6427616-6427616 FN3935-S SNP G -> T AC=1;AN=158;BQB=0.984671;DP=2270;DP4=1034,1147,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.27351e-08;MQSB=0.947749;RPB=0.991465;SGB=37.4429;VDB=0.12752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.8:6429466 chr08:006429466 0 W/6429466-6429466 FN3944-S SNP C -> A AC=2;AN=168;BQB=0.625113;DP=2742;DP4=1278,1336,10,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.21062e-10;MQSB=0.635934;RPB=0.99015;SGB=105.343;VDB=0.478671;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.8:6430243 chr08:006430243 0 W/6430243-6430243 FN848-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-219.SNP.8:6436840 chr08:006436840 0 W/6436840-6436840 FN-219 Single Base Substitution T-C INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN915-S.SNP.8:6443438 chr08:006443438 0 W/6443438-6443438 FN915-S Single Base Substitution G-T INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2655-S.SNP.8:6443800 chr08:006443800 0 W/6443800-6443800 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.0985798;DP=4643;DP4=1868,2492,12,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000430756;MQB=8.92442e-11;MQSB=0.000210421;RPB=0.640983;SGB=47.7211;VDB=0.991937;EFF=INTRON(MODIFIER||||416|LOC_Os08g10930|protein_coding|CODING|LOC_Os08g10930.1|1|1) FN4272-S.SNP.8:6451475 chr08:006451475 0 W/6451475-6451475 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.787048;DP=2627;DP4=1206,1335,13,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.77643e-11;MQSB=0.998569;RPB=0.370894;SGB=41.8678;VDB=0.549606;EFF=INTRON(MODIFIER||||667|LOC_Os08g10940|protein_coding|CODING|LOC_Os08g10940.1|4|1) FN4155-S.SNP.8:6464061 chr08:006464061 0 W/6464061-6464061 FN4155-S SNP T -> G AC=2;AN=170;BQB=0.370749;DP=2604;DP4=1289,1236,15,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.97059e-15;MQSB=0.992083;RPB=0.963319;SGB=118.955;VDB=0.827445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ctt|I67L|420|LOC_Os08g10960|protein_coding|CODING|LOC_Os08g10960.1|1|1) FN-259.SNP.8:6466958 chr08:006466958 0 W/6466958-6466958 FN-259 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g10970 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2488.SNP.8:6467704 chr08:006467704 0 W/6467704-6467704 FN2488 SNP C -> A AC=2;AN=200;BQB=0.596061;DP=4742;DP4=2364,2104,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.58078e-21;MQSB=0.82769;RPB=0.0694698;SGB=150.973;VDB=0.88758;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V254|455|LOC_Os08g10970|protein_coding|CODING|LOC_Os08g10970.1|1|1) FN2621-S.SNP.8:6473905 chr08:006473905 0 W/6473905-6473905 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.314914;DP=5297;DP4=2489,2443,20,22;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0230319;MQB=0.00280453;MQSB=0.00123854;RPB=0.0133993;SGB=94.6142;VDB=0.257792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.8:6477825 chr08:006477825 0 W/6477825-6477825 FN1332-S Single Base Substitution T-A INTRON HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1412-S.SNP.8:6479761 chr08:006479761 0 W/6479761-6479761 FN1412-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1630-S.SNP.8:6481005 chr08:006481005 0 W/6481005-6481005 FN1630-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2491.SNP.8:6481005 chr08:006481005 0 W/6481005-6481005 FN2491 SNP G -> T AC=1;AN=200;BQB=0.762624;DP=4273;DP4=2088,1887,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62552e-15;MQSB=0.979913;RPB=0.047253;SGB=-40.4483;VDB=0.116761;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S205|255|LOC_Os08g11000|protein_coding|CODING|LOC_Os08g11000.1|2|1) FN3417-S.SNP.8:6481005 chr08:006481005 0 W/6481005-6481005 FN3417-S SNP G -> T AC=2;AN=184;BQB=0.960971;DP=2336;DP4=1280,963,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.23396e-17;MQSB=0.98317;RPB=0.901268;SGB=99.14;VDB=0.56948;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S205|255|LOC_Os08g11000|protein_coding|CODING|LOC_Os08g11000.1|2|1) FN3780-S.SNP.8:6481005 chr08:006481005 0 W/6481005-6481005 FN3780-S SNP G -> T AC=1;AN=190;BQB=0.958579;DP=2382;DP4=1268,1037,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74776e-05;MQSB=0.960637;RPB=0.338142;SGB=10.8904;VDB=0.125735;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S205|255|LOC_Os08g11000|protein_coding|CODING|LOC_Os08g11000.1|2|1) FN795-S.SNP.8:6481005 chr08:006481005 0 W/6481005-6481005 FN795-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN718-S.SNP.8:6487435 chr08:006487435 0 W/6487435-6487435 FN718-S Single Base Substitution C-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN3668-S.SNP.8:6490431 chr08:006490431 0 W/6490431-6490431 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.980077;DP=3719;DP4=1736,1836,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.219145;MQB=0.549369;MQSB=0;RPB=0.538217;SGB=53.8699;VDB=0.662306;EFF=INTRON(MODIFIER||||502|LOC_Os08g11010|protein_coding|CODING|LOC_Os08g11010.1|1|1) FN3488-S.SNP.8:6492025 chr08:006492025 0 W/6492025-6492025 FN3488-S SNP C -> T AC=2;AN=184;BQB=0.981171;DP=3349;DP4=1634,1571,11,10;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.104509;MQB=0.466529;MQSB=9.74817e-20;RPB=0.67619;SGB=89.4385;VDB=0.73619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A41V|178|LOC_Os08g11020|protein_coding|CODING|LOC_Os08g11020.1|1|1) FN2244-S.SNP.8:6494949 chr08:006494949 0 W/6494949-6494949 FN2244-S SNP A -> T AC=1;AN=190;BQB=0.327801;DP=5201;DP4=2461,2418,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.5713e-08;MQSB=0.986553;RPB=0.499102;SGB=43.2083;VDB=0.234625;EFF=INTERGENIC(MODIFIER||||||||||1) 701-4.SNP.8:6496766 chr08:006496766 0 W/6496766-6496766 701-4 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os08g11040 retrotransposon protein, putative, unclassified, expressed SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. FN740-S.SNP.8:6496816 chr08:006496816 0 W/6496816-6496816 FN740-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN860-S.SNP.8:6498863 chr08:006498863 0 W/6498863-6498863 FN860-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN597-S.SNP.8:6500061 chr08:006500061 0 W/6500061-6500061 FN597-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g11040 retrotransposon protein, putative, unclassified, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2200-S.SNP.8:6501970 chr08:006501970 0 W/6501970-6501970 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.4015;DP=4876;DP4=2280,2208,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25405e-09;MQSB=0.843048;RPB=0.483333;SGB=14.9883;VDB=0.430085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G863S|1236|LOC_Os08g11050|protein_coding|CODING|LOC_Os08g11050.1|4|1) FN2558-S.SNP.8:6502071 chr08:006502071 0 W/6502071-6502071 FN2558-S SNP C -> T AC=1;AN=186;BQB=0.397847;DP=3713;DP4=1636,1838,5,12;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.24387e-08;MQSB=0.975571;RPB=0.821459;SGB=50.9344;VDB=0.841866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S829N|1236|LOC_Os08g11050|protein_coding|CODING|LOC_Os08g11050.1|4|1) FN2282.SNP.8:6502122 chr08:006502122 0 W/6502122-6502122 FN2282 SNP C -> T AC=1;AN=192;BQB=0.271435;DP=5106;DP4=2377,2503,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.79923e-08;MQSB=0.938323;RPB=0.201212;SGB=72.0322;VDB=0.0368366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C812Y|1236|LOC_Os08g11050|protein_coding|CODING|LOC_Os08g11050.1|4|1) FN2271-S.SNP.8:6502315 chr08:006502315 0 W/6502315-6502315 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.243237;DP=4591;DP4=2104,2194,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33149e-06;MQSB=0.889666;RPB=0.922325;SGB=15.9981;VDB=0.11483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R748C|1236|LOC_Os08g11050|protein_coding|CODING|LOC_Os08g11050.1|4|1) FN2625-S.SNP.8:6505737 chr08:006505737 0 W/6505737-6505737 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.340536;DP=4921;DP4=2610,2038,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.97066e-17;MQSB=0.973472;RPB=0.795495;SGB=94.3471;VDB=0.490453;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.8:6506570 chr08:006506570 0 W/6506570-6506570 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3443-S.SNP.8:6515089 chr08:006515089 0 W/6515089-6515089 FN3443-S SNP G -> T AC=2;AN=184;BQB=0.998189;DP=3990;DP4=1914,1986,12,16;HOB=0.0215028;ICB=0.494625;MQ=25;MQ0F=0.151378;MQB=0.367204;MQSB=0;RPB=0.302275;SGB=121.091;VDB=0.378423;EFF=INTRON(MODIFIER||||538|LOC_Os08g11080|protein_coding|CODING|LOC_Os08g11080.1|1|1) FN_822-5-1.SNP.8:6521795 chr08:006521795 0 W/6521795-6521795 FN_822-5-1 Single Base Substitution C-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3729-S.SNP.8:6524944 chr08:006524944 0 W/6524944-6524944 FN3729-S SNP T -> C AC=2;AN=190;BQB=0.995562;DP=2559;DP4=1270,1180,13,13;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0164127;MQB=0.10015;MQSB=0.378578;RPB=0.985904;SGB=112.85;VDB=0.38299;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.8:6525413 chr08:006525413 0 W/6525413-6525413 FN627-S Single Base Substitution G-A INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN627-S.SNP.8:6525434 chr08:006525434 0 W/6525434-6525434 FN627-S Single Base Substitution C-T INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. 701-3.SNP.8:6530396 chr08:006530396 0 W/6530396-6530396 701-3 Single Base Substitution T-C INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN3360-S.SNP.8:6532827 chr08:006532827 0 W/6532827-6532827 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.957336;DP=2830;DP4=1422,1296,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.9128e-10;MQSB=0.95593;RPB=0.978796;SGB=23.2751;VDB=0.870707;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S889L|962|LOC_Os08g11110|protein_coding|CODING|LOC_Os08g11110.1|8|1) FN3504-S.SNP.8:6533021 chr08:006533021 0 W/6533021-6533021 FN3504-S SNP T -> C AC=2;AN=188;BQB=0.503672;DP=2734;DP4=1273,1378,13,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.69768e-11;MQSB=0.978761;RPB=0.927346;SGB=74.9605;VDB=0.710419;EFF=INTRON(MODIFIER||||962|LOC_Os08g11110|protein_coding|CODING|LOC_Os08g11110.1|7|1) FN3294-S.SNP.8:6533239 chr08:006533239 0 W/6533239-6533239 FN3294-S SNP A -> G AC=2;AN=184;BQB=0.883262;DP=2709;DP4=1206,1393,21,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00036914;MQB=6.69678e-16;MQSB=0.736504;RPB=0.959907;SGB=106.184;VDB=0.724897;EFF=INTRON(MODIFIER||||962|LOC_Os08g11110|protein_coding|CODING|LOC_Os08g11110.1|7|1) FN3761-S.SNP.8:6533506 chr08:006533506 0 W/6533506-6533506 FN3761-S SNP C -> A AC=1;AN=190;BQB=0.983191;DP=2668;DP4=1293,1270,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00112444;MQB=2.03774e-05;MQSB=0.0849014;RPB=0.981779;SGB=35.4339;VDB=0.208395;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K857N|962|LOC_Os08g11110|protein_coding|CODING|LOC_Os08g11110.1|7|1) FN1283-S.SNP.8:6537281 chr08:006537281 0 W/6537281-6537281 FN1283-S Single Base Substitution A-T INTRON HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4179-S.SNP.8:6539442 chr08:006539442 0 W/6539442-6539442 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.901006;DP=2449;DP4=1361,1016,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00081666;MQB=2.23354e-08;MQSB=0.996398;RPB=0.996055;SGB=56.7575;VDB=0.34069;EFF=INTRON(MODIFIER||||962|LOC_Os08g11110|protein_coding|CODING|LOC_Os08g11110.1|1|1) FN459-S.SNP.8:6542377 chr08:006542377 0 W/6542377-6542377 FN459-S Single Base Substitution G-A INTRON HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN-159.SNP.8:6545820 chr08:006545820 0 W/6545820-6545820 FN-159 Single Base Substitution G-T INTERGENIC HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2411.SNP.8:6546538 chr08:006546538 0 W/6546538-6546538 FN2411 SNP T -> C AC=1;AN=200;BQB=0.50198;DP=4383;DP4=2013,1949,23,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00273785;MQB=7.99675e-16;MQSB=1;RPB=0.463045;SGB=65.9573;VDB=0.842472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V69A|570|LOC_Os08g11130|protein_coding|CODING|LOC_Os08g11130.1|1|1) FN1237-S.SNP.8:6546970 chr08:006546970 0 W/6546970-6546970 FN1237-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g11130 retrotransposon protein, putative, unclassified, expressed SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3381-S.SNP.8:6549208 chr08:006549208 0 W/6549208-6549208 FN3381-S SNP T -> A AC=1;AN=184;BQB=0.997382;DP=3771;DP4=1437,2215,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.19847e-09;MQSB=0.480083;RPB=0.258851;SGB=49.835;VDB=0.171058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.8:6549209 chr08:006549209 0 W/6549209-6549209 FN3381-S SNP C -> A AC=1;AN=184;BQB=0.999981;DP=3772;DP4=1449,2187,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.74376e-10;MQSB=0.360935;RPB=0.0725746;SGB=75.8731;VDB=0.1447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.8:6549387 chr08:006549387 0 W/6549387-6549387 FN3356-S SNP A -> C AC=1;AN=184;BQB=0.752696;DP=3845;DP4=1899,1812,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.350325;MQB=0.200591;MQSB=0;RPB=0.056851;SGB=49.835;VDB=0.366901;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.8:6551618 chr08:006551618 0 W/6551618-6551618 FN1686-S SNP G -> C AC=1;AN=188;BQB=0.905336;DP=1903;DP4=918,941,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.54539e-10;MQSB=0.982501;RPB=0.957657;SGB=-38.278;VDB=0.787738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P1245R|1559|LOC_Os08g11150|protein_coding|CODING|LOC_Os08g11150.1|10|1) FN974-S.SNP.8:6555963 chr08:006555963 0 W/6555963-6555963 FN974-S Single Base Substitution T-C INTRON HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN4300-S.SNP.8:6556386 chr08:006556386 0 W/6556386-6556386 FN4300-S SNP G -> A AC=1;AN=170;BQB=0.440208;DP=2538;DP4=1238,1234,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.07736e-06;MQSB=0.990195;RPB=0.973174;SGB=31.4354;VDB=0.637461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T822I|1559|LOC_Os08g11150|protein_coding|CODING|LOC_Os08g11150.1|6|1) FN2575-S.SNP.8:6558540 chr08:006558540 0 W/6558540-6558540 FN2575-S SNP T -> C AC=1;AN=198;BQB=0.669167;DP=3643;DP4=1414,1768,22,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.9569e-17;MQSB=0.723474;RPB=0.957541;SGB=-94.9477;VDB=0.384783;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q240|1559|LOC_Os08g11150|protein_coding|CODING|LOC_Os08g11150.1|3|1) FN1501-S.SNP.8:6559229 chr08:006559229 0 W/6559229-6559229 FN1501-S Single Base Substitution C-T INTRON HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3509-S.SNP.8:6570627 chr08:006570627 0 W/6570627-6570627 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.390119;DP=3449;DP4=1822,1565,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.32261e-07;MQSB=0.902342;RPB=0.925774;SGB=50.1574;VDB=0.098688;EFF=INTRON(MODIFIER||||919|LOC_Os08g11180|protein_coding|CODING|LOC_Os08g11180.1|2|1) FN1438-S.SNP.8:6570695 chr08:006570695 0 W/6570695-6570695 FN1438-S Single Base Substitution T-G INTRON HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2403.SNP.8:6572059 chr08:006572059 0 W/6572059-6572059 FN2403 SNP G -> A AC=1;AN=200;BQB=0.843945;DP=4231;DP4=2070,1914,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33112e-06;MQSB=0.991639;RPB=0.943109;SGB=25.849;VDB=0.805428;EFF=INTRON(MODIFIER||||919|LOC_Os08g11180|protein_coding|CODING|LOC_Os08g11180.1|1|1) FN1453-S.SNP.8:6586013 chr08:006586013 0 W/6586013-6586013 FN1453-S Single Base Substitution G-A INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2487.SNP.8:6586573 chr08:006586573 0 W/6586573-6586573 FN2487 SNP A -> T AC=1;AN=200;BQB=0.651287;DP=7251;DP4=4328,2496,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.93612e-12;MQSB=0.887311;RPB=0.999981;SGB=86.5007;VDB=0.361413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.8:6586928 chr08:006586928 0 W/6586928-6586928 FN-122 Single Base Substitution C-T INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2415.SNP.8:6595317 chr08:006595317 0 W/6595317-6595317 FN2415 SNP T -> C AC=1;AN=200;BQB=0.875168;DP=4201;DP4=2157,1783,6,5;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0102357;MQB=0.0908332;MQSB=7.05568e-30;RPB=0.272863;SGB=45.0543;VDB=0.427987;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.8:6609231 chr08:006609231 0 W/6609231-6609231 FN3787-S SNP A -> T AC=2;AN=190;BQB=0.910953;DP=2579;DP4=1298,1164,18,18;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00116324;MQB=6.52823e-09;MQSB=7.29553e-08;RPB=0.968727;SGB=117.84;VDB=0.617348;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.8:6618116 chr08:006618116 0 W/6618116-6618116 FN1565-S Single Base Substitution G-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1655-S.SNP.8:6620200 chr08:006620200 0 W/6620200-6620200 FN1655-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g11260 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2379.SNP.8:6625664 chr08:006625664 0 W/6625664-6625664 FN2379 SNP A -> G AC=1;AN=192;BQB=0.163833;DP=4143;DP4=1608,2158,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0115858;MQB=6.759e-05;MQSB=0;RPB=0.597177;SGB=140.497;VDB=0.00729544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.8:6628888 chr08:006628888 0 W/6628888-6628888 FN2390 SNP C -> T AC=1;AN=200;BQB=0.478082;DP=4329;DP4=1942,2115,10,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.03234;MQB=0.254497;MQSB=1.39807e-16;RPB=0.995127;SGB=42.5108;VDB=0.954005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.8:6631333 chr08:006631333 0 W/6631333-6631333 FN1265-S Single Base Substitution G-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2308.SNP.8:6633947 chr08:006633947 0 W/6633947-6633947 FN2308 SNP G -> A AC=1;AN=192;BQB=0.96218;DP=4853;DP4=2177,2385,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0063878;MQB=0.107671;MQSB=0.000233868;RPB=0.986015;SGB=54.5574;VDB=0.131146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G183R|501|LOC_Os08g11280|protein_coding|CODING|LOC_Os08g11280.1|2|1) FN723-S.SNP.8:6635764 chr08:006635764 0 W/6635764-6635764 FN723-S Single Base Substitution C-G INTRON HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2138-S.SNP.8:6647771 chr08:006647771 0 W/6647771-6647771 FN2138-S SNP A -> G AC=1;AN=168;BQB=0.20861;DP=1982;DP4=960,958,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000219218;MQSB=0.8486;RPB=0.93214;SGB=-82.6471;VDB=0.140266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.8:6655143 chr08:006655143 0 W/6655143-6655143 FN3717-S SNP C -> T AC=1;AN=190;BQB=0.990693;DP=2485;DP4=1355,978,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0156942;MQB=0.0778629;MQSB=0.000453622;RPB=0.805022;SGB=18.3316;VDB=0.804867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.8:6662149 chr08:006662149 0 W/6662149-6662149 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.0479795;DP=3154;DP4=1598,1072,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0818009;MQB=0.960647;MQSB=6.54981e-09;RPB=0.507975;SGB=21.559;VDB=0.555212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A189T|213|LOC_Os08g11330|protein_coding|CODING|LOC_Os08g11330.1|2|1) FN2420.SNP.8:6667830 chr08:006667830 0 W/6667830-6667830 FN2420 SNP C -> T AC=1;AN=200;BQB=0.338643;DP=3591;DP4=1097,2118,4,13;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0331384;MQB=2.11977e-05;MQSB=0.011209;RPB=0.874711;SGB=51.0851;VDB=0.684569;EFF=INTRON(MODIFIER||||171|LOC_Os08g11340|protein_coding|CODING|LOC_Os08g11340.1|1|1) FN2698-S.SNP.8:6668657 chr08:006668657 0 W/6668657-6668657 FN2698-S SNP T -> A AC=1;AN=200;BQB=0.749422;DP=5011;DP4=2344,2447,8,14;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.122131;MQB=0.997672;MQSB=7.49763e-36;RPB=0.88468;SGB=15.9106;VDB=0.0332274;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.8:6675378 chr08:006675378 0 W/6675378-6675378 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN4074-S.SNP.8:6684562 chr08:006684562 0 W/6684562-6684562 FN4074-S SNP G -> A AC=2;AN=182;BQB=0.866407;DP=3169;DP4=1817,1260,19,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000315557;MQB=3.49231e-14;MQSB=0.972178;RPB=0.648123;SGB=116.285;VDB=0.478149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G55S|167|LOC_Os08g11370|protein_coding|CODING|LOC_Os08g11370.1|2|1) FN1478-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN1478-S Single Base Substitution T-C INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1535-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN1535-S Single Base Substitution T-C INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1735-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.993883;DP=2359;DP4=1085,1215,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.0894447;MQB=0.933255;MQSB=6.17973e-42;RPB=0.577804;SGB=35.9843;VDB=0.00598806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN2190-S SNP T -> C AC=2;AN=190;BQB=0.616427;DP=5125;DP4=2378,2098,27,30;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.102439;MQB=0.334345;MQSB=0;RPB=0.467238;SGB=69.3739;VDB=0.232923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN2689-S SNP T -> C AC=1;AN=200;BQB=0.983204;DP=5675;DP4=3037,2252,21,16;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.117004;MQB=0.518599;MQSB=0;RPB=0.420082;SGB=-1.612;VDB=0.38806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN3794-S SNP T -> C AC=2;AN=190;BQB=0.663509;DP=3432;DP4=1907,1370,20,20;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.041958;MQB=0.826251;MQSB=2.4877e-20;RPB=0.893714;SGB=87.5066;VDB=0.716726;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN4110-S SNP T -> C AC=2;AN=182;BQB=0.971764;DP=3538;DP4=1925,1473,14,20;HOB=0.0217365;ICB=0.494567;MQ=35;MQ0F=0.0689655;MQB=0.839042;MQSB=6.61847e-27;RPB=0.232859;SGB=147.861;VDB=0.43371;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.8:6685630 chr08:006685630 0 W/6685630-6685630 FN4190-S SNP T -> C AC=2;AN=170;BQB=0.981914;DP=2882;DP4=1597,1152,18,10;HOB=0.0232526;ICB=0.494188;MQ=35;MQ0F=0.0596808;MQB=0.786314;MQSB=6.74042e-16;RPB=0.766825;SGB=118.955;VDB=0.383702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.8:6687125 chr08:006687125 0 W/6687125-6687125 FN3475-S SNP C -> T AC=1;AN=184;BQB=0.733225;DP=3420;DP4=1592,1643,11,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000292398;MQB=3.79687e-07;MQSB=0.669009;RPB=0.94119;SGB=103.004;VDB=0.177632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.8:6687178 chr08:006687178 0 W/6687178-6687178 FN3311-S SNP A -> G AC=1;AN=184;BQB=0.682654;DP=3376;DP4=1510,1553,8,19;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0192536;MQB=0.00611183;MQSB=0.00024081;RPB=0.489164;SGB=85.0529;VDB=0.144891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.8:6690550 chr08:006690550 0 W/6690550-6690550 FN2627-S SNP G -> A AC=1;AN=200;BQB=0.997801;DP=4641;DP4=2095,2258,4,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000646412;MQB=0.0233815;MQSB=0.18167;RPB=0.915058;SGB=40.2696;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.8:6690558 chr08:006690558 0 W/6690558-6690558 FN3673-S SNP G -> A AC=1;AN=190;BQB=0.83064;DP=1737;DP4=689,957,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00115141;MQB=0.0257723;MQSB=0.659459;RPB=0.79387;SGB=58.2031;VDB=0.784434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.8:6690983 chr08:006690983 0 W/6690983-6690983 FN2559-S SNP A -> G AC=2;AN=198;BQB=0.912228;DP=3930;DP4=2156,1568,11,6;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00661578;MQB=1.12783e-07;MQSB=0.00347559;RPB=0.627633;SGB=50.9344;VDB=0.446137;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.8:6692495 chr08:006692495 0 W/6692495-6692495 FN-213 Single Base Substitution C-A INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN3659-S.SNP.8:6694871 chr08:006694871 0 W/6694871-6694871 FN3659-S SNP G -> C AC=1;AN=190;BQB=0.946208;DP=2866;DP4=1571,1112,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00104676;MQB=8.76842e-08;MQSB=0.294358;RPB=0.506444;SGB=62.7569;VDB=0.511433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.8:6695743 chr08:006695743 0 W/6695743-6695743 FN-261 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g11410 retrotransposon protein, putative, unclassified, expressed SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN-92.SNP.8:6696487 chr08:006696487 0 W/6696487-6696487 FN-92 Single Base Substitution C-A INTERGENIC HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2260-S.SNP.8:6696487 chr08:006696487 0 W/6696487-6696487 FN2260-S SNP C -> A AC=2;AN=190;BQB=0.0180515;DP=2592;DP4=1283,1158,12,4;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.42331e-06;MQSB=0.00362856;RPB=0.83643;SGB=46.7622;VDB=0.318781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.8:6696775 chr08:006696775 0 W/6696775-6696775 FN2556-S SNP T -> G AC=1;AN=198;BQB=0.353245;DP=3634;DP4=1646,1696,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00357733;MQB=1.54644e-14;MQSB=0.988401;RPB=0.998324;SGB=123.071;VDB=0.793731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3581-S.SNP.8:6701926 chr08:006701926 0 W/6701926-6701926 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.231039;DP=3384;DP4=1706,1462,75,50;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.158392;MQB=6.99137e-32;MQSB=0.00012199;RPB=6.60684e-26;SGB=-1615.67;VDB=1.52369e-38;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V584I|1393|LOC_Os08g11430|protein_coding|CODING|LOC_Os08g11430.1|1|1) FN2324.SNP.8:6705895 chr08:006705895 0 W/6705895-6705895 FN2324 SNP G -> T AC=1;AN=192;BQB=0.658313;DP=5148;DP4=2501,2304,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0159285;MQB=0.0228441;MQSB=0;RPB=0.313501;SGB=-6.8678;VDB=0.543594;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.8:6708508 chr08:006708508 0 W/6708508-6708508 FN1008-S Single Base Substitution T-C INTRON HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN-246.SNP.8:6711300 chr08:006711300 0 W/6711300-6711300 FN-246 Single Base Substitution G-A INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN1016-S.SNP.8:6716109 chr08:006716109 0 W/6716109-6716109 FN1016-S Single Base Substitution C-A INTERGENIC HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN4155-S.SNP.8:6726167 chr08:006726167 0 W/6726167-6726167 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.0235803;DP=7616;DP4=3929,3492,15,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.41086e-10;MQSB=0.9074;RPB=0.73145;SGB=-11.2351;VDB=0.828927;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.8:6730370 chr08:006730370 0 W/6730370-6730370 FN446-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1462-S.SNP.8:6730861 chr08:006730861 0 W/6730861-6730861 FN1462-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g11470 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1286-S.SNP.8:6734808 chr08:006734808 0 W/6734808-6734808 FN1286-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN4148-S.SNP.8:6736833 chr08:006736833 0 W/6736833-6736833 FN4148-S SNP G -> A AC=1;AN=170;BQB=0.999397;DP=7827;DP4=3672,3944,15,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.15626e-19;MQSB=0.993139;RPB=0.930937;SGB=24.5296;VDB=0.809688;EFF=INTRON(MODIFIER||||209|LOC_Os08g11480|protein_coding|CODING|LOC_Os08g11480.1|3|1) FN3413-S.SNP.8:6738620 chr08:006738620 0 W/6738620-6738620 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.999981;DP=7965;DP4=4129,3635,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38888e-11;MQSB=0.99872;RPB=0.359721;SGB=84.9167;VDB=0.873239;EFF=UTR_3_PRIME(MODIFIER||789||209|LOC_Os08g11480|protein_coding|CODING|LOC_Os08g11480.1|8|1) FN1759-S.SNP.8:6740523 chr08:006740523 0 W/6740523-6740523 FN1759-S SNP A -> T AC=1;AN=188;BQB=0.028492;DP=4356;DP4=1224,594,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0668271;MQSB=0.931986;RPB=0.0218492;SGB=-74.1569;VDB=0.569208;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.8:6745676 chr08:006745676 0 W/6745676-6745676 FN4040-S SNP G -> A AC=1;AN=168;BQB=0.995391;DP=7712;DP4=3552,3818,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.73438e-13;MQSB=0.995095;RPB=0.161181;SGB=62.1945;VDB=0.337921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:6748748 chr08:006748748 0 W/6748748-6748748 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.878162;DP=7872;DP4=3987,3640,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.52116e-13;MQSB=0.991925;RPB=0.694947;SGB=70.9657;VDB=0.624434;EFF=INTERGENIC(MODIFIER||||||||||1) FN580-S.SNP.8:6753164 chr08:006753164 0 W/6753164-6753164 FN580-S Single Base Substitution C-G INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-190.SNP.8:6757349 chr08:006757349 0 W/6757349-6757349 FN-190 Single Base Substitution G-A INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-155.SNP.8:6762161 chr08:006762161 0 W/6762161-6762161 FN-155 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2342.SNP.8:6762161 chr08:006762161 0 W/6762161-6762161 FN2342 SNP C -> T AC=1;AN=192;BQB=0.48746;DP=14588;DP4=8303,5440,28,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.5216e-21;MQSB=0.998635;RPB=0.236614;SGB=-186.332;VDB=0.741163;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q384|393|LOC_Os08g11540|protein_coding|CODING|LOC_Os08g11540.1|6|1) FN2433.SNP.8:6762161 chr08:006762161 0 W/6762161-6762161 FN2433 SNP C -> T AC=1;AN=200;BQB=0.379863;DP=13663;DP4=8167,4770,42,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10304e-31;MQSB=0.944896;RPB=0.843449;SGB=-115.499;VDB=0.977658;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q384|393|LOC_Os08g11540|protein_coding|CODING|LOC_Os08g11540.1|6|1) FN3950-S.SNP.8:6762161 chr08:006762161 0 W/6762161-6762161 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.394658;DP=8043;DP4=4978,2681,31,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.21736e-18;MQSB=0.304505;RPB=0.934588;SGB=35.6687;VDB=0.861613;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q384|393|LOC_Os08g11540|protein_coding|CODING|LOC_Os08g11540.1|6|1) FN2653-S.SNP.8:6766423 chr08:006766423 0 W/6766423-6766423 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.11736;DP=3893;DP4=1841,1525,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06038e-08;MQSB=0.63177;RPB=0.997618;SGB=65.5058;VDB=0.565017;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.8:6769260 chr08:006769260 0 W/6769260-6769260 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.998497;DP=3041;DP4=1496,1474,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0124959;MQB=0.127745;MQSB=0;RPB=0.533695;SGB=49.6712;VDB=0.776191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.8:6771465 chr08:006771465 0 W/6771465-6771465 FN1461-S Single Base Substitution T-C INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1473-S.SNP.8:6777746 chr08:006777746 0 W/6777746-6777746 FN1473-S Single Base Substitution C-G INTRON Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2273-S.SNP.8:6779509 chr08:006779509 0 W/6779509-6779509 FN2273-S SNP C -> G AC=2;AN=190;BQB=0.621668;DP=5149;DP4=2465,2245,30,18;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.100214;MQB=0.86214;MQSB=7.76586e-11;RPB=0.785575;SGB=-49.7081;VDB=0.731251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.8:6782385 chr08:006782385 0 W/6782385-6782385 FN2262-S SNP G -> A AC=2;AN=190;BQB=0.448889;DP=4856;DP4=2251,2309,32,20;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.103995;MQB=0.308145;MQSB=0;RPB=0.716067;SGB=174.702;VDB=0.128981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.8:6788554 chr08:006788554 0 W/6788554-6788554 FN3810-S SNP A -> T AC=1;AN=190;BQB=0.996278;DP=2823;DP4=1317,1430,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.10627;MQB=0.858119;MQSB=0;RPB=0.801717;SGB=39.9877;VDB=0.216732;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.8:6796294 chr08:006796294 0 W/6796294-6796294 FN-222 Single Base Substitution G-A INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1496-S.SNP.8:6798092 chr08:006798092 0 W/6798092-6798092 FN1496-S Single Base Substitution C-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN3610-S.SNP.8:6808720 chr08:006808720 0 W/6808720-6808720 FN3610-S SNP A -> G AC=2;AN=190;BQB=0.984846;DP=2746;DP4=1154,1340,15,11;HOB=0.020831;ICB=0.494793;MQ=10;MQ0F=0.541151;MQB=0.017631;MQSB=0;RPB=0.996843;SGB=21.2038;VDB=0.999063;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.8:6809555 chr08:006809555 0 W/6809555-6809555 FN3814-S SNP A -> C AC=2;AN=190;BQB=0.920491;DP=3003;DP4=1368,1568,6,10;HOB=0.020831;ICB=0.494793;MQ=23;MQ0F=0.232767;MQB=0.791435;MQSB=0;RPB=0.999669;SGB=67.3108;VDB=0.168442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.8:6821609 chr08:006821609 0 W/6821609-6821609 FN2483 SNP G -> A AC=1;AN=200;BQB=0.782017;DP=4269;DP4=1888,2128,6,13;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0215507;MQB=0.28458;MQSB=2.45266e-23;RPB=0.938431;SGB=81.8956;VDB=0.531045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.8:6822331 chr08:006822331 0 W/6822331-6822331 FN1313-S Single Base Substitution C-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN4221-S.SNP.8:6822450 chr08:006822450 0 W/6822450-6822450 FN4221-S SNP T -> A AC=2;AN=170;BQB=0.994161;DP=2790;DP4=1299,1364,19,16;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0304659;MQB=0.00441149;MQSB=0.790616;RPB=0.716262;SGB=110.616;VDB=0.245611;EFF=INTERGENIC(MODIFIER||||||||||1) FN1070-S.SNP.8:6824264 chr08:006824264 0 W/6824264-6824264 FN1070-S Single Base Substitution G-A INTERGENIC HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2260-S.SNP.8:6825370 chr08:006825370 0 W/6825370-6825370 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.132563;DP=5096;DP4=2450,2001,22,15;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.215463;MQB=0.948614;MQSB=0;RPB=0.644037;SGB=38.2964;VDB=0.327072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.8:6825371 chr08:006825371 0 W/6825371-6825371 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.970945;DP=5104;DP4=2406,2020,30,16;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.216889;MQB=0.994742;MQSB=0;RPB=0.32972;SGB=-402.656;VDB=0.204977;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.8:6834735 chr08:006834735 0 W/6834735-6834735 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.962013;DP=5276;DP4=2497,2492,8,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0299469;MQB=0.000979837;MQSB=0;RPB=0.802176;SGB=47.4799;VDB=0.260032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.8:6835186 chr08:006835186 0 W/6835186-6835186 FN1380-S Single Base Substitution G-A INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN581-S.SNP.8:6840975 chr08:006840975 0 W/6840975-6840975 FN581-S Single Base Substitution C-T INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN947-S.SNP.8:6848962 chr08:006848962 0 W/6848962-6848962 FN947-S Single Base Substitution G-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3473-S.SNP.8:6849669 chr08:006849669 0 W/6849669-6849669 FN3473-S SNP C -> T AC=1;AN=184;BQB=0.968887;DP=2779;DP4=1145,1570,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=2.66217e-05;MQSB=0.180786;RPB=0.999999;SGB=13.188;VDB=0.827669;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P128|180|LOC_Os08g11690|protein_coding|CODING|LOC_Os08g11690.1|2|1) FN3942-S.SNP.8:6853025 chr08:006853025 0 W/6853025-6853025 FN3942-S SNP A -> T AC=2;AN=168;BQB=0.945714;DP=2682;DP4=1227,1333,14,10;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.113348;MQB=0.997575;MQSB=3.37039e-39;RPB=0.720375;SGB=100.912;VDB=0.0595618;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.8:6855816 chr08:006855816 0 W/6855816-6855816 FN956-S Single Base Substitution A-G INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1367-S.SNP.8:6855886 chr08:006855886 0 W/6855886-6855886 FN1367-S Single Base Substitution G-T INTERGENIC Homo SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1695-S.SNP.8:6857496 chr08:006857496 0 W/6857496-6857496 FN1695-S SNP C -> T AC=1;AN=188;BQB=0.568228;DP=3135;DP4=1661,1422,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.232536;MQB=0.463494;MQSB=2.9043e-20;RPB=0.999951;SGB=8.62479;VDB=0.827646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.8:6858031 chr08:006858031 0 W/6858031-6858031 FN3832-S SNP G -> A AC=1;AN=190;BQB=0.988269;DP=3240;DP4=1514,1622,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0805556;MQB=0.949727;MQSB=1.44057e-19;RPB=0.999985;SGB=62.7569;VDB=0.529512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.8:6858201 chr08:006858201 0 W/6858201-6858201 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.994792;DP=2610;DP4=1224,1293,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000766284;MQB=2.46071e-06;MQSB=0.186486;RPB=0.358503;SGB=44.1818;VDB=0.441478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.8:6858930 chr08:006858930 0 W/6858930-6858930 FN3993-S SNP A -> G AC=1;AN=168;BQB=0.362695;DP=2299;DP4=1025,1085,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00565463;MQB=1.76129e-06;MQSB=0.0572948;RPB=0.592126;SGB=27.0464;VDB=0.586163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.8:6878641 chr08:006878641 0 W/6878641-6878641 FN3970-S SNP T -> C AC=1;AN=168;BQB=0.8875;DP=2815;DP4=1245,1451,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.37016;MQB=0.466749;MQSB=2.78704e-09;RPB=0.745501;SGB=41.6096;VDB=0.367245;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.8:6880585 chr08:006880585 0 W/6880585-6880585 FN1056-S Single Base Substitution G-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN742-S.SNP.8:6880636 chr08:006880636 0 W/6880636-6880636 FN742-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g11730 retrotransposon protein, putative, unclassified SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1353-S.SNP.8:6884986 chr08:006884986 0 W/6884986-6884986 FN1353-S Single Base Substitution T-A INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN695-S.SNP.8:6885407 chr08:006885407 0 W/6885407-6885407 FN695-S Single Base Substitution G-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN2546-S.SNP.8:6894791 chr08:006894791 0 W/6894791-6894791 FN2546-S SNP C -> T AC=1;AN=198;BQB=0.992269;DP=4246;DP4=2043,1994,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0445125;MQB=0.265051;MQSB=3.60469e-11;RPB=0.235811;SGB=47.3393;VDB=0.957817;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.8:6898805 chr08:006898805 0 W/6898805-6898805 FN1640-S Single Base Substitution A-T INTERGENIC Homo SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2456.SNP.8:6901763 chr08:006901763 0 W/6901763-6901763 FN2456 SNP T -> G AC=1;AN=200;BQB=0.964201;DP=4503;DP4=2017,2201,7,10;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0937153;MQB=0.997935;MQSB=0.00326917;RPB=0.945617;SGB=72.6852;VDB=0.0589171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Cac|N1157H|1692|LOC_Os08g11780|protein_coding|CODING|LOC_Os08g11780.1|5|1) FN2532-S.SNP.8:6902174 chr08:006902174 0 W/6902174-6902174 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.680116;DP=4020;DP4=1952,1886,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.14005;MQB=0.496411;MQSB=8.57902e-07;RPB=0.148289;SGB=81.7147;VDB=0.0301621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V1020L|1692|LOC_Os08g11780|protein_coding|CODING|LOC_Os08g11780.1|5|1) FN3050-S.SNP.8:6917510 chr08:006917510 0 W/6917510-6917510 FN3050-S SNP C -> T AC=2;AN=184;BQB=0.356538;DP=2373;DP4=1265,897,9,11;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0998736;MQB=0.99891;MQSB=3.58037e-12;RPB=0.964184;SGB=60.4004;VDB=0.988433;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.8:6925329 chr08:006925329 0 W/6925329-6925329 FN_770-6-1 Single Base Substitution G-A HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN1575-S.SNP.8:6927103 chr08:006927103 0 W/6927103-6927103 FN1575-S Single Base Substitution C-G INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN-368.SNP.8:6929315 chr08:006929315 0 W/6929315-6929315 FN-368 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g11810 retrotransposon protein, putative, unclassified, expressed SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3294-S.SNP.8:6932696 chr08:006932696 0 W/6932696-6932696 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.94405;DP=4287;DP4=1882,2222,19,19;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0501516;MQB=0.319407;MQSB=5.21197e-15;RPB=0.822794;SGB=123.793;VDB=0.213776;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K41*|287|LOC_Os08g11820|protein_coding|CODING|LOC_Os08g11820.1|1|1) FN-132.SNP.8:6938556 chr08:006938556 0 W/6938556-6938556 FN-132 Single Base Substitution G-T INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN3861-S.SNP.8:6939560 chr08:006939560 0 W/6939560-6939560 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.98654;DP=2573;DP4=1302,1190,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.0128255;MQB=0.000426153;MQSB=0.254936;RPB=0.602313;SGB=33.9591;VDB=0.468633;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.8:6940085 chr08:006940085 0 W/6940085-6940085 FN1228-S Single Base Substitution C-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN4114-S.SNP.8:6948491 chr08:006948491 0 W/6948491-6948491 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.694096;DP=3066;DP4=1240,1728,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.0603392;MQB=0.852377;MQSB=5.72515e-14;RPB=0.753592;SGB=39.1386;VDB=0.290594;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.8:6948838 chr08:006948838 0 W/6948838-6948838 FN3325-S SNP G -> T AC=2;AN=184;BQB=0.999962;DP=3099;DP4=1642,1340,13,12;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.000968054;MQB=9.35895e-06;MQSB=0.0497054;RPB=0.964966;SGB=107.526;VDB=0.0247668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.8:6950254 chr08:006950254 0 W/6950254-6950254 FN3364-S SNP C -> T AC=2;AN=184;BQB=0.953149;DP=3013;DP4=1468,1472,13,7;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0.00896117;MQB=0.928237;MQSB=0;RPB=0.909199;SGB=60.4004;VDB=0.919254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R1135K|1443|LOC_Os08g11850|protein_coding|CODING|LOC_Os08g11850.1|2|1) FN_543-2-6.SNP.8:6950294 chr08:006950294 0 W/6950294-6950294 FN_543-2-6 Single Base Substitution T-A Homo LOC_Os08g11850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2323.SNP.8:6954457 chr08:006954457 0 W/6954457-6954457 FN2323 SNP C -> T AC=1;AN=192;BQB=0.160823;DP=5085;DP4=2323,2517,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.202163;MQB=0.231027;MQSB=0;RPB=0.0936917;SGB=46.8644;VDB=0.149189;EFF=INTERGENIC(MODIFIER||||||||||1) FN-47.SNP.8:6957105 chr08:006957105 0 W/6957105-6957105 FN-47 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g11860 retrotransposon protein, putative, unclassified, expressed SNo: 47, Mutant_ID: FN-47, Generation: M2, Mutations: 28, Genes: 80, Seed availability: Yes. FN1755-S.SNP.8:6958791 chr08:006958791 0 W/6958791-6958791 FN1755-S SNP C -> A AC=1;AN=188;BQB=0.274291;DP=3286;DP4=1309,1922,13,24;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.508217;MQB=0.204374;MQSB=0;RPB=0.594651;SGB=-3.59057;VDB=0.998905;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.8:6958791 chr08:006958791 0 W/6958791-6958791 FN4011-S SNP C -> A AC=1;AN=168;BQB=0.963853;DP=2770;DP4=1328,1341,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.344765;MQB=0.207109;MQSB=0;RPB=0.664719;SGB=24.4556;VDB=0.89288;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.8:6958791 chr08:006958791 0 W/6958791-6958791 FN934-S Single Base Substitution C-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1576-S.SNP.8:6962021 chr08:006962021 0 W/6962021-6962021 FN1576-S Single Base Substitution G-C INTERGENIC Homo SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2484.SNP.8:6963562 chr08:006963562 0 W/6963562-6963562 FN2484 SNP T -> A AC=1;AN=200;BQB=0.979242;DP=4755;DP4=2263,2246,9,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00105152;MQB=8.13953e-05;MQSB=0.0674249;RPB=0.972225;SGB=54.6902;VDB=0.270256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.8:6964878 chr08:006964878 0 W/6964878-6964878 FN3667-S SNP G -> C AC=1;AN=190;BQB=0.93654;DP=2607;DP4=1362,1071,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0391254;MQB=0.00590686;MQSB=2.49559e-14;RPB=0.999693;SGB=7.21887;VDB=0.737286;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.8:6965958 chr08:006965958 0 W/6965958-6965958 FN779-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g11880 retrotransposon protein, putative, unclassified, expressed SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN2431.SNP.8:6967420 chr08:006967420 0 W/6967420-6967420 FN2431 SNP C -> T AC=1;AN=200;BQB=0.191575;DP=4323;DP4=2073,1937,7,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00717095;MQB=1.02857e-05;MQSB=0.446559;RPB=0.998508;SGB=9.48993;VDB=0.81215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1712-S.SNP.8:6968369 chr08:006968369 0 W/6968369-6968369 FN1712-S SNP C -> T AC=1;AN=188;BQB=0.124551;DP=3105;DP4=1585,1478,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000322061;MQB=3.08139e-09;MQSB=0.938321;RPB=0.660155;SGB=20.9711;VDB=0.0604691;EFF=INTRON(MODIFIER||||338|LOC_Os08g11890|protein_coding|CODING|LOC_Os08g11890.1|2|1) FN-161.SNP.8:6970361 chr08:006970361 0 W/6970361-6970361 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN2134-S.SNP.8:6970840 chr08:006970840 0 W/6970840-6970840 FN2134-S SNP T -> C AC=2;AN=168;BQB=0.964395;DP=2465;DP4=1584,797,25,20;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.138337;MQB=0.787991;MQSB=0.101256;RPB=0.75342;SGB=54.5807;VDB=0.0190715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.8:6981724 chr08:006981724 0 W/6981724-6981724 FN1537-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g11910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3452-S.SNP.8:6985840 chr08:006985840 0 W/6985840-6985840 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.914459;DP=3670;DP4=1705,1878,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0506812;MQB=0.988118;MQSB=1.32166e-11;RPB=0.660371;SGB=32.2261;VDB=0.895162;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G1310R|1550|LOC_Os08g11920|protein_coding|CODING|LOC_Os08g11920.1|6|1) FN501-S.SNP.8:6992808 chr08:006992808 0 W/6992808-6992808 FN501-S Single Base Substitution T-C INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN4073-S.SNP.8:6994188 chr08:006994188 0 W/6994188-6994188 FN4073-S SNP C -> T AC=1;AN=182;BQB=0.620104;DP=3138;DP4=1393,1674,3,11;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.0793499;MQB=0.253342;MQSB=0;RPB=0.325569;SGB=39.1386;VDB=0.460669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A278V|1783|LOC_Os08g11930|protein_coding|CODING|LOC_Os08g11930.1|2|1) FN4038-S.SNP.8:6999982 chr08:006999982 0 W/6999982-6999982 FN4038-S SNP G -> C AC=1;AN=168;BQB=0.771734;DP=1491;DP4=713,644,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00469484;MQB=0.000577547;MQSB=0.0017891;RPB=0.961844;SGB=52.1728;VDB=0.785478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.8:7003034 chr08:007003034 0 W/7003034-7003034 FN3393-S SNP A -> C AC=1;AN=184;BQB=0.794971;DP=3452;DP4=1787,1570,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.149189;MQB=0.601751;MQSB=7.80895e-29;RPB=0.865202;SGB=48.7425;VDB=0.032301;EFF=INTRON(MODIFIER||||322|LOC_Os08g11940|protein_coding|CODING|LOC_Os08g11940.1|1|1) FN2555-S.SNP.8:7005121 chr08:007005121 0 W/7005121-7005121 FN2555-S SNP A -> G AC=1;AN=190;BQB=0.752132;DP=3234;DP4=1397,1375,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0262832;MQB=0.871753;MQSB=7.80833e-21;RPB=0.991281;SGB=29.3637;VDB=0.345322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.8:7010340 chr08:007010340 0 W/7010340-7010340 FN1651-S Single Base Substitution G-T INTRON HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2674-S.SNP.8:7013605 chr08:007013605 0 W/7013605-7013605 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.96987;DP=5211;DP4=2428,2494,13,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0335828;MQB=0.000227304;MQSB=2.87094e-09;RPB=0.482723;SGB=9.48993;VDB=0.934986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H412Y|1745|LOC_Os08g11960|protein_coding|CODING|LOC_Os08g11960.1|3|1) FN-325.SNP.8:7023145 chr08:007023145 0 W/7023145-7023145 FN-325 Single Base Substitution C-G INTRON HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN2653-S.SNP.8:7023837 chr08:007023837 0 W/7023837-7023837 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.996148;DP=5313;DP4=2558,2402,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.2111e-15;MQSB=0.609967;RPB=0.937772;SGB=23.9365;VDB=0.863488;EFF=INTRON(MODIFIER||||273|LOC_Os08g11970|protein_coding|CODING|LOC_Os08g11970.1|1|1) FN2449.SNP.8:7027725 chr08:007027725 0 W/7027725-7027725 FN2449 SNP A -> G AC=1;AN=200;BQB=0.937101;DP=3861;DP4=2150,1440,11,4;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.034706;MQB=0.0175056;MQSB=0;RPB=0.277295;SGB=63.4749;VDB=0.861953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.8:7031520 chr08:007031520 0 W/7031520-7031520 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.857644;DP=4631;DP4=1865,2534,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1806e-12;MQSB=0.681232;RPB=0.989703;SGB=82.301;VDB=0.603993;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R663C|1737|LOC_Os08g11980|protein_coding|CODING|LOC_Os08g11980.1|5|1) FN3285-S.SNP.8:7037179 chr08:007037179 0 W/7037179-7037179 FN3285-S SNP G -> T AC=1;AN=184;BQB=0.876779;DP=3113;DP4=1505,1508,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0128493;MQB=0.00128263;MQSB=0.00889673;RPB=0.808675;SGB=53.2642;VDB=0.359369;EFF=INTRON(MODIFIER||||1737|LOC_Os08g11980|protein_coding|CODING|LOC_Os08g11980.1|1|1) FN1416-S.SNP.8:7038836 chr08:007038836 0 W/7038836-7038836 FN1416-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3746-S.SNP.8:7039752 chr08:007039752 0 W/7039752-7039752 FN3746-S SNP C -> A AC=2;AN=190;BQB=0.840869;DP=3309;DP4=1952,1206,18,8;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0320338;MQB=0.523214;MQSB=2.30526e-11;RPB=0.387401;SGB=112.85;VDB=0.486623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.8:7044833 chr08:007044833 0 W/7044833-7044833 FN3419-S SNP G -> C AC=1;AN=184;BQB=0.988852;DP=3028;DP4=1381,1523,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0792602;MQB=0.568056;MQSB=1.21395e-16;RPB=0.690399;SGB=23.2751;VDB=0.674156;EFF=INTRON(MODIFIER||||997|LOC_Os08g12000|protein_coding|CODING|LOC_Os08g12000.1|3|1) FN563-S.SNP.8:7046479 chr08:007046479 0 W/7046479-7046479 FN563-S Single Base Substitution T-C INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2753-S.SNP.8:7049914 chr08:007049914 0 W/7049914-7049914 FN2753-S SNP G -> A AC=2;AN=200;BQB=0.979675;DP=5109;DP4=2426,2440,22,14;HOB=0.0198;ICB=0.495051;MQ=18;MQ0F=0.387943;MQB=0.0380752;MQSB=4.28797e-43;RPB=0.672869;SGB=119.583;VDB=0.0635066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.8:7049914 chr08:007049914 0 W/7049914-7049914 FN2767-S SNP G -> A AC=2;AN=198;BQB=0.776652;DP=4226;DP4=1973,2043,25,16;HOB=0.019998;ICB=0.495001;MQ=17;MQ0F=0.404401;MQB=0.0383574;MQSB=1.27925e-24;RPB=0.694317;SGB=182.807;VDB=0.385871;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.8:7049914 chr08:007049914 0 W/7049914-7049914 FN729-S Single Base Substitution G-A INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN-342.SNP.8:7053258 chr08:007053258 0 W/7053258-7053258 FN-342 Single Base Substitution G-A INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1453-S.SNP.8:7055972 chr08:007055972 0 W/7055972-7055972 FN1453-S Single Base Substitution A-T INTRON HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1217-S.SNP.8:7057034 chr08:007057034 0 W/7057034-7057034 FN1217-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g12020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1300-S.SNP.8:7063111 chr08:007063111 0 W/7063111-7063111 FN1300-S Single Base Substitution C-T INTRON HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN584-S.SNP.8:7067714 chr08:007067714 0 W/7067714-7067714 FN584-S Single Base Substitution C-T INTRON HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2392.SNP.8:7069536 chr08:007069536 0 W/7069536-7069536 FN2392 SNP C -> T AC=2;AN=200;BQB=0.956949;DP=4916;DP4=2283,2189,31,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00305126;MQB=8.35846e-19;MQSB=0.953431;RPB=0.696447;SGB=128.481;VDB=0.762362;EFF=INTRON(MODIFIER||||2584|LOC_Os08g12020|protein_coding|CODING|LOC_Os08g12020.1|10|1) FN-81.SNP.8:7070524 chr08:007070524 0 W/7070524-7070524 FN-81 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g12020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1175-S.SNP.8:7073146 chr08:007073146 0 W/7073146-7073146 FN1175-S Single Base Substitution G-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1541-S.SNP.8:7076823 chr08:007076823 0 W/7076823-7076823 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN1109-S.SNP.8:7091024 chr08:007091024 0 W/7091024-7091024 FN1109-S Single Base Substitution A-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2237-S.SNP.8:7107582 chr08:007107582 0 W/7107582-7107582 FN2237-S SNP G -> T AC=1;AN=190;BQB=0.229364;DP=4366;DP4=2215,1833,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0563445;MQB=0.453418;MQSB=0;RPB=0.141255;SGB=25.439;VDB=0.340495;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.8:7108861 chr08:007108861 0 W/7108861-7108861 FN4124-S SNP T -> C AC=1;AN=182;BQB=0.973165;DP=2298;DP4=1101,1073,5,2;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00261097;MQB=0.00454098;MQSB=0.583006;RPB=0.883089;SGB=26.0691;VDB=0.298692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.8:7109305 chr08:007109305 0 W/7109305-7109305 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.999899;DP=3464;DP4=1424,1711,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0404157;MQB=0.0395758;MQSB=1.81484e-10;RPB=0.0400073;SGB=26.7492;VDB=0.129194;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.8:7109349 chr08:007109349 0 W/7109349-7109349 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.115445;DP=1360;DP4=723,600,6,7;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00147059;MQB=0.0505675;MQSB=0.314706;RPB=0.696225;SGB=0.908326;VDB=0.964835;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.8:7117293 chr08:007117293 0 W/7117293-7117293 FN-131 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g12080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN1476-S.SNP.8:7124429 chr08:007124429 0 W/7124429-7124429 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2305.SNP.8:7126059 chr08:007126059 0 W/7126059-7126059 FN2305 SNP C -> T AC=1;AN=192;BQB=0.22319;DP=3157;DP4=1515,1078,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0126703;MQB=0.0131021;MQSB=8.26766e-44;RPB=0.011845;SGB=-95.9313;VDB=0.242174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.8:7133483 chr08:007133483 0 W/7133483-7133483 FN1033-S Single Base Substitution C-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3833-S.SNP.8:7134034 chr08:007134034 0 W/7134034-7134034 FN3833-S SNP G -> A AC=2;AN=190;BQB=0.983716;DP=3144;DP4=1326,1672,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.8546e-17;MQSB=0.788703;RPB=0.808467;SGB=103.624;VDB=0.837472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.8:7134503 chr08:007134503 0 W/7134503-7134503 FN3474-S SNP T -> C AC=1;AN=184;BQB=0.984071;DP=2738;DP4=1177,1381,9,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00036523;MQB=4.07182e-12;MQSB=0.991407;RPB=0.445494;SGB=78.0093;VDB=0.537102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.8:7135122 chr08:007135122 0 W/7135122-7135122 FN1334-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3753-S.SNP.8:7136700 chr08:007136700 0 W/7136700-7136700 FN3753-S SNP G -> C AC=1;AN=190;BQB=0.984778;DP=2494;DP4=1282,1082,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65534e-10;MQSB=0.908538;RPB=0.995654;SGB=43.2083;VDB=0.459099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E424Q|939|LOC_Os08g12120|protein_coding|CODING|LOC_Os08g12120.1|4|1) FN1001-S.SNP.8:7144777 chr08:007144777 0 W/7144777-7144777 FN1001-S Single Base Substitution A-T INTRON HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2690-S.SNP.8:7146704 chr08:007146704 0 W/7146704-7146704 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.643122;DP=4660;DP4=2176,2264,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000214592;MQB=5.26155e-09;MQSB=0.991641;RPB=0.18642;SGB=37.3004;VDB=0.266887;EFF=INTRON(MODIFIER||||1348|LOC_Os08g12130|protein_coding|CODING|LOC_Os08g12130.1|6|1) FN3772-S.SNP.8:7148101 chr08:007148101 0 W/7148101-7148101 FN3772-S SNP A -> T AC=1;AN=190;BQB=0.690853;DP=3164;DP4=1593,1484,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00379267;MQB=0.0224904;MQSB=2.22576e-05;RPB=0.987608;SGB=21.8853;VDB=0.816978;EFF=INTRON(MODIFIER||||1348|LOC_Os08g12130|protein_coding|CODING|LOC_Os08g12130.1|8|1) FN3639-S.SNP.8:7151052 chr08:007151052 0 W/7151052-7151052 FN3639-S SNP G -> T AC=1;AN=190;BQB=0.948158;DP=2998;DP4=1389,1499,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.15773e-05;MQSB=0.499407;RPB=0.919042;SGB=35.4339;VDB=0.536808;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A608|739|LOC_Os08g12140|protein_coding|CODING|LOC_Os08g12140.1|7|1) FN620-S.SNP.8:7156399 chr08:007156399 0 W/7156399-7156399 FN620-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g12140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN-225.SNP.8:7159199 chr08:007159199 0 W/7159199-7159199 FN-225 Single Base Substitution G-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3889-S.SNP.8:7160701 chr08:007160701 0 W/7160701-7160701 FN3889-S SNP C -> T AC=1;AN=158;BQB=0.937212;DP=2261;DP4=1127,1043,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.05096e-09;MQSB=0.869728;RPB=0.460743;SGB=55.806;VDB=0.604518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.8:7168202 chr08:007168202 0 W/7168202-7168202 FN1448-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g12170 retrotransposon, putative, centromere-specific SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1480-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN1480-S Single Base Substitution C-T INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1655-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN1655-S Single Base Substitution C-T INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN2149-S SNP C -> T AC=2;AN=168;BQB=0.732951;DP=3422;DP4=2008,1351,22,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.11742e-19;MQSB=0.996673;RPB=0.874313;SGB=-91.6059;VDB=0.733095;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN2278-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN2278-S SNP C -> T AC=2;AN=190;BQB=0.664745;DP=4832;DP4=2340,2162,29,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.95459e-28;MQSB=0.617176;RPB=0.409849;SGB=120.707;VDB=0.122774;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN2322.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN2322 SNP C -> T AC=2;AN=192;BQB=0.52192;DP=4869;DP4=2326,2231,21,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.61526e-19;MQSB=0.993881;RPB=0.192037;SGB=-1.22432;VDB=0.973647;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN3283-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN3283-S SNP C -> T AC=2;AN=184;BQB=0.527139;DP=3073;DP4=1345,1589,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.54001e-13;MQSB=0.819505;RPB=0.987371;SGB=53.5365;VDB=0.207374;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN3426-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.768268;DP=2971;DP4=1298,1555,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000336587;MQB=1.21872e-09;MQSB=0.899647;RPB=0.597036;SGB=12.8895;VDB=0.152408;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN3563-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN3563-S SNP C -> T AC=1;AN=188;BQB=0.907624;DP=2942;DP4=1334,1484,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.21661e-14;MQSB=0.98797;RPB=0.950455;SGB=98.9552;VDB=0.899424;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN3788-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN3788-S SNP C -> T AC=2;AN=190;BQB=0.9889;DP=2743;DP4=1279,1330,10,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.83239e-17;MQSB=0.97155;RPB=0.690254;SGB=61.9679;VDB=0.331298;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN3948-S.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN3948-S SNP C -> T AC=1;AN=168;BQB=0.960953;DP=2700;DP4=1247,1319,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.82948e-11;MQSB=0.944608;RPB=0.997609;SGB=39.2004;VDB=0.237823;EFF=INTRON(MODIFIER||||608|LOC_Os08g12180|protein_coding|CODING|LOC_Os08g12180.1|4|1) FN_N1-130-1.SNP.8:7170581 chr08:007170581 0 W/7170581-7170581 FN_N1-130-1 Single Base Substitution C-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3956-S.SNP.8:7173549 chr08:007173549 0 W/7173549-7173549 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.99286;DP=2409;DP4=1195,1079,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00041511;MQB=3.90275e-05;MQSB=0.190354;RPB=0.725485;SGB=47.7421;VDB=0.966159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.8:7179391 chr08:007179391 0 W/7179391-7179391 FN2484 SNP C -> T AC=1;AN=200;BQB=0.136093;DP=3097;DP4=1220,1632,5,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000968679;MQB=4.7792e-06;MQSB=1.27534e-05;RPB=0.962928;SGB=72.6852;VDB=0.954132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.8:7179884 chr08:007179884 0 W/7179884-7179884 FN3431-S SNP G -> C AC=2;AN=184;BQB=0.926352;DP=4216;DP4=2088,2020,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000474383;MQB=2.52853e-14;MQSB=0.978522;RPB=0.984809;SGB=112.047;VDB=0.741928;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.8:7181105 chr08:007181105 0 W/7181105-7181105 FN547-S Single Base Substitution C-A INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN527-S.SNP.8:7181384 chr08:007181384 0 W/7181384-7181384 FN527-S Single Base Substitution G-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN4235-S.SNP.8:7182088 chr08:007182088 0 W/7182088-7182088 FN4235-S SNP A -> T AC=1;AN=170;BQB=0.99654;DP=2598;DP4=1369,1136,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.10359e-10;MQSB=0.604643;RPB=0.933994;SGB=78.9707;VDB=0.404495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.8:7182772 chr08:007182772 0 W/7182772-7182772 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.980183;DP=4961;DP4=2221,2333,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06669e-09;MQSB=0.962666;RPB=0.958365;SGB=62.7569;VDB=0.0334801;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.8:7184452 chr08:007184452 0 W/7184452-7184452 FN2648-S SNP C -> A AC=1;AN=200;BQB=0.588956;DP=5023;DP4=2506,2198,11,17;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00935696;MQB=0.00125242;MQSB=0.834989;RPB=0.919443;SGB=90.7419;VDB=0.309413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.8:7186570 chr08:007186570 0 W/7186570-7186570 FN-287 Single Base Substitution G-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2126-S.SNP.8:7186667 chr08:007186667 0 W/7186667-7186667 FN2126-S SNP T -> C AC=2;AN=168;BQB=0.298069;DP=3240;DP4=1417,1769,18,22;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000308642;MQB=1.67453e-09;MQSB=0.641479;RPB=0.272794;SGB=-5.89455;VDB=0.0261974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.8:7186713 chr08:007186713 0 W/7186713-7186713 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.876026;DP=4855;DP4=2289,2293,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2823e-14;MQSB=0.226862;RPB=0.689089;SGB=87.1368;VDB=0.976501;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.8:7199651 chr08:007199651 0 W/7199651-7199651 FN1552-S SNP T -> C AC=1;AN=188;BQB=0.470809;DP=2546;DP4=1436,1066,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000785546;MQB=7.46853e-06;MQSB=6.31826e-16;RPB=0.952074;SGB=23.5329;VDB=0.0314002;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q582R|588|LOC_Os08g12220|protein_coding|CODING|LOC_Os08g12220.1|4|1) FN4255-S.SNP.8:7200606 chr08:007200606 0 W/7200606-7200606 FN4255-S SNP A -> G AC=1;AN=170;BQB=0.997285;DP=2645;DP4=1258,1308,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.324764;MQB=0.996485;MQSB=0;RPB=0.8054;SGB=78.9707;VDB=0.944726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y295H|588|LOC_Os08g12220|protein_coding|CODING|LOC_Os08g12220.1|3|1) FN460-S.SNP.8:7212341 chr08:007212341 0 W/7212341-7212341 FN460-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g12260 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN4230-S.SNP.8:7218875 chr08:007218875 0 W/7218875-7218875 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.651053;DP=2550;DP4=1255,1232,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0109804;MQB=0.389985;MQSB=0.97487;RPB=0.982178;SGB=38.987;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S522N|850|LOC_Os08g12270|protein_coding|CODING|LOC_Os08g12270.1|4|1) FN2539-S.SNP.8:7222506 chr08:007222506 0 W/7222506-7222506 FN2539-S SNP T -> C AC=1;AN=198;BQB=0.964745;DP=3583;DP4=1363,1882,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000279096;MQB=0.000287906;MQSB=0.985435;RPB=0.890292;SGB=25.7687;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.8:7224333 chr08:007224333 0 W/7224333-7224333 FN-188 Single Base Substitution A-G INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2701-S.SNP.8:7224919 chr08:007224919 0 W/7224919-7224919 FN2701-S SNP A -> T AC=1;AN=200;BQB=0.912416;DP=4744;DP4=2318,2133,13,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11865e-21;MQSB=0.84905;RPB=0.855965;SGB=160.183;VDB=0.242477;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.8:7230979 chr08:007230979 0 W/7230979-7230979 FN952-S Single Base Substitution T-A INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN1056-S.SNP.8:7231716 chr08:007231716 0 W/7231716-7231716 FN1056-S Single Base Substitution C-G INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN544-S.SNP.8:7234364 chr08:007234364 0 W/7234364-7234364 FN544-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g12290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN544-S.SNP.8:7234367 chr08:007234367 0 W/7234367-7234367 FN544-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g12290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2681-S.SNP.8:7242996 chr08:007242996 0 W/7242996-7242996 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.740492;DP=4941;DP4=2577,2122,11,16;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0246914;MQB=0.155571;MQSB=0.0494024;RPB=0.629167;SGB=23.9365;VDB=0.264566;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.8:7244689 chr08:007244689 0 W/7244689-7244689 FN4069-S SNP C -> A AC=1;AN=182;BQB=0.995958;DP=3568;DP4=1552,1895,15,24;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0389574;MQB=0.937581;MQSB=7.42538e-10;RPB=0.999772;SGB=170.415;VDB=0.365416;EFF=INTRON(MODIFIER||||1752|LOC_Os08g12300|protein_coding|CODING|LOC_Os08g12300.1|1|1) FN1016-S.SNP.8:7249747 chr08:007249747 0 W/7249747-7249747 FN1016-S Single Base Substitution C-T INTRON HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1112-S.SNP.8:7252745 chr08:007252745 0 W/7252745-7252745 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN-74.SNP.8:7254544 chr08:007254544 0 W/7254544-7254544 FN-74 Single Base Substitution G-T INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3345-S.SNP.8:7256071 chr08:007256071 0 W/7256071-7256071 FN3345-S SNP A -> G AC=1;AN=184;BQB=0.999218;DP=2478;DP4=1213,999,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.24858e-06;MQSB=0.990081;RPB=0.569891;SGB=13.188;VDB=0.836722;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.8:7259900 chr08:007259900 0 W/7259900-7259900 FN-185 Single Base Substitution C-T INTERGENIC HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN3542-S.SNP.8:7261310 chr08:007261310 0 W/7261310-7261310 FN3542-S SNP C -> A AC=1;AN=188;BQB=0.973592;DP=3409;DP4=1924,1386,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09875e-09;MQSB=0.957602;RPB=0.661987;SGB=33.7061;VDB=0.0162986;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.8:7262653 chr08:007262653 0 W/7262653-7262653 FN892-S Single Base Substitution G-T INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN892-S.SNP.8:7262654 chr08:007262654 0 W/7262654-7262654 FN892-S Single Base Substitution A-T INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN579-S.SNP.8:7267425 chr08:007267425 0 W/7267425-7267425 FN579-S Single Base Substitution C-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2420.SNP.8:7269625 chr08:007269625 0 W/7269625-7269625 FN2420 SNP A -> T AC=1;AN=200;BQB=0.968145;DP=7065;DP4=2462,4144,14,16;HOB=5e-05;ICB=0.0001005;MQ=16;MQ0F=0.33305;MQB=0.0207284;MQSB=0;RPB=0.759;SGB=-5.84819;VDB=0.379334;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.8:7270493 chr08:007270493 0 W/7270493-7270493 FN1669-S SNP A -> T AC=2;AN=188;BQB=0.762291;DP=2832;DP4=1125,1653,17,12;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0317797;MQB=0.994084;MQSB=0;RPB=0.55862;SGB=-75.0128;VDB=0.26089;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.8:7272565 chr08:007272565 0 W/7272565-7272565 FN1416-S Single Base Substitution C-T INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-92.SNP.8:7275862 chr08:007275862 0 W/7275862-7275862 FN-92 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g12350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2260-S.SNP.8:7275862 chr08:007275862 0 W/7275862-7275862 FN2260-S SNP G -> T AC=2;AN=190;BQB=0.42578;DP=4749;DP4=2168,2205,29,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.22928e-32;MQSB=0.6333;RPB=0.913255;SGB=228.01;VDB=0.48926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V341L|1590|LOC_Os08g12350|protein_coding|CODING|LOC_Os08g12350.1|2|1) FN2662-S.SNP.8:7278867 chr08:007278867 0 W/7278867-7278867 FN2662-S SNP T -> A AC=1;AN=200;BQB=0.603831;DP=4739;DP4=2090,2308,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53836e-10;MQSB=0.279887;RPB=0.942125;SGB=14.3054;VDB=0.238187;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L1067M|1590|LOC_Os08g12350|protein_coding|CODING|LOC_Os08g12350.1|6|1) FN2240-S.SNP.8:7282394 chr08:007282394 0 W/7282394-7282394 FN2240-S SNP C -> T AC=1;AN=190;BQB=0.842465;DP=4985;DP4=2427,2287,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200602;MQB=0.000268026;MQSB=0.219789;RPB=0.861708;SGB=32.5467;VDB=0.532753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D114N|391|LOC_Os08g12360|protein_coding|CODING|LOC_Os08g12360.1|2|1) FN502-S.SNP.8:7288737 chr08:007288737 0 W/7288737-7288737 FN502-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2426.SNP.8:7294163 chr08:007294163 0 W/7294163-7294163 FN2426 SNP G -> A AC=1;AN=200;BQB=0.372366;DP=4224;DP4=2282,1744,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000236742;MQB=2.08147e-06;MQSB=0.0265955;RPB=0.304233;SGB=40.4492;VDB=0.0665951;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N533|552|LOC_Os08g12380|protein_coding|CODING|LOC_Os08g12380.1|3|1) FN2533-S.SNP.8:7295329 chr08:007295329 0 W/7295329-7295329 FN2533-S SNP T -> A AC=1;AN=198;BQB=0.906265;DP=4287;DP4=2080,1957,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000233263;MQB=1.41759e-05;MQSB=0.960623;RPB=0.875291;SGB=32.9588;VDB=0.376267;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K172*|552|LOC_Os08g12380|protein_coding|CODING|LOC_Os08g12380.1|2|1);LOF=(LOC_Os08g12380|LOC_Os08g12380|1|1.00);NMD=(LOC_Os08g12380|LOC_Os08g12380|1|1.00) FN3372-S.SNP.8:7295624 chr08:007295624 0 W/7295624-7295624 FN3372-S SNP G -> A AC=1;AN=184;BQB=0.962894;DP=3017;DP4=1564,1355,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.60738e-08;MQSB=0.974637;RPB=0.934598;SGB=32.2261;VDB=0.66732;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S73|552|LOC_Os08g12380|protein_coding|CODING|LOC_Os08g12380.1|2|1) FN3765-S.SNP.8:7299819 chr08:007299819 0 W/7299819-7299819 FN3765-S SNP C -> A AC=1;AN=190;BQB=0.279688;DP=2844;DP4=1118,1592,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16044e-05;MQSB=0.999598;RPB=0.0393993;SGB=71.8647;VDB=0.555448;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.8:7301308 chr08:007301308 0 W/7301308-7301308 FN1116-S Single Base Substitution A-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN1627-S.SNP.8:7304619 chr08:007304619 0 W/7304619-7304619 FN1627-S Single Base Substitution A-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN1065-S.SNP.8:7311360 chr08:007311360 0 W/7311360-7311360 FN1065-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g12390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1374-S.SNP.8:7314523 chr08:007314523 0 W/7314523-7314523 FN1374-S Single Base Substitution G-T INTRON HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN445-S.SNP.8:7316041 chr08:007316041 0 W/7316041-7316041 FN445-S Single Base Substitution T-C INTRON HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2446.SNP.8:7318624 chr08:007318624 0 W/7318624-7318624 FN2446 SNP G -> T AC=2;AN=200;BQB=0.39498;DP=4390;DP4=2169,2007,22,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00022779;MQB=9.60984e-14;MQSB=0.233314;RPB=0.907707;SGB=46.4088;VDB=0.477717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.8:7322311 chr08:007322311 0 W/7322311-7322311 FN3477-S SNP C -> G AC=2;AN=184;BQB=0.463537;DP=3457;DP4=1963,1353,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.05395e-15;MQSB=0.908709;RPB=0.994997;SGB=32.6727;VDB=0.13344;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.8:7322360 chr08:007322360 0 W/7322360-7322360 FN1339-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.8:7322360 chr08:007322360 0 W/7322360-7322360 FN2311 SNP T -> C AC=1;AN=192;BQB=0.863967;DP=5167;DP4=2413,2466,10,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.47692e-17;MQSB=0.580508;RPB=0.789027;SGB=62.2505;VDB=0.944275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.8:7332717 chr08:007332717 0 W/7332717-7332717 FN2539-S SNP T -> C AC=1;AN=198;BQB=0.938545;DP=4545;DP4=2143,2129,4,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.80754e-10;MQSB=0.933658;RPB=0.550744;SGB=81.7147;VDB=0.502883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.8:7333300 chr08:007333300 0 W/7333300-7333300 FN2202-S SNP G -> T AC=1;AN=190;BQB=0.898564;DP=5630;DP4=2315,2873,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=5.15346e-06;MQSB=0.00518586;RPB=0.984371;SGB=32.5467;VDB=0.522028;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.8:7343503 chr08:007343503 0 W/7343503-7343503 FN465-S Single Base Substitution A-G INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1275-S.SNP.8:7363781 chr08:007363781 0 W/7363781-7363781 FN1275-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN3515-S.SNP.8:7366327 chr08:007366327 0 W/7366327-7366327 FN3515-S SNP A -> T AC=1;AN=188;BQB=0.986223;DP=2718;DP4=1306,1309,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02869e-07;MQSB=0.895066;RPB=0.826025;SGB=44.4357;VDB=0.179012;EFF=INTRON(MODIFIER||||87|LOC_Os08g12449|protein_coding|CODING|LOC_Os08g12449.6|2|1),INTRON(MODIFIER||||103|LOC_Os08g12449|protein_coding|CODING|LOC_Os08g12449.5|3|1),INTRON(MODIFIER||||103|LOC_Os08g12449|protein_coding|CODING|LOC_Os08g12449.4|3|1) FN2298.SNP.8:7372400 chr08:007372400 0 W/7372400-7372400 FN2298 SNP T -> A AC=1;AN=192;BQB=6.11864e-05;DP=4567;DP4=1387,2006,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.00115069;MQSB=0.00749226;RPB=0.533407;SGB=-431.265;VDB=0.755852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.8:7375613 chr08:007375613 0 W/7375613-7375613 FN2117-S SNP T -> C AC=2;AN=168;BQB=0.594436;DP=4584;DP4=2094,2426,24,17;HOB=0.0235261;ICB=0.494119;MQ=33;MQ0F=0.0818063;MQB=0.986255;MQSB=0;RPB=0.931898;SGB=-5.46373;VDB=0.250328;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T1067|1749|LOC_Os08g12470|protein_coding|CODING|LOC_Os08g12470.1|4|1) FN1538-S.SNP.8:7381911 chr08:007381911 0 W/7381911-7381911 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN4163-S.SNP.8:7381911 chr08:007381911 0 W/7381911-7381911 FN4163-S SNP G -> A AC=2;AN=170;BQB=0.443776;DP=2206;DP4=965,1146,9,14;HOB=0.0232526;ICB=0.494188;MQ=38;MQ0F=0.043971;MQB=0.0215974;MQSB=0.066153;RPB=0.977609;SGB=14.431;VDB=0.799742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.8:7388332 chr08:007388332 0 W/7388332-7388332 FN3298-S SNP G -> A AC=2;AN=184;BQB=0.83048;DP=3623;DP4=1911,1598,14,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.17754e-14;MQSB=0.924386;RPB=0.996275;SGB=121.091;VDB=0.351741;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A100|191|LOC_Os08g12490|protein_coding|CODING|LOC_Os08g12490.1|3|1) FN1449-S.SNP.8:7412282 chr08:007412282 0 W/7412282-7412282 FN1449-S Single Base Substitution C-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2387.SNP.8:7416486 chr08:007416486 0 W/7416486-7416486 FN2387 SNP C -> T AC=1;AN=192;BQB=0.344825;DP=4561;DP4=2140,2132,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.60351e-08;MQSB=0.369769;RPB=0.478199;SGB=-37.9417;VDB=0.26738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R237C|730|LOC_Os08g12530|protein_coding|CODING|LOC_Os08g12530.1|3|1) FN470-S.SNP.8:7416545 chr08:007416545 0 W/7416545-7416545 FN470-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3536-S.SNP.8:7416698 chr08:007416698 0 W/7416698-7416698 FN3536-S SNP C -> T AC=1;AN=188;BQB=0.973544;DP=3079;DP4=1662,1381,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00194868;MQB=8.43662e-06;MQSB=0.662534;RPB=0.775594;SGB=58.0655;VDB=0.656766;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D307|730|LOC_Os08g12530|protein_coding|CODING|LOC_Os08g12530.1|3|1) FN-300.SNP.8:7422353 chr08:007422353 0 W/7422353-7422353 FN-300 Single Base Substitution C-G INTRON HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN1540-S.SNP.8:7424005 chr08:007424005 0 W/7424005-7424005 FN1540-S Single Base Substitution A-G INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3529-S.SNP.8:7425703 chr08:007425703 0 W/7425703-7425703 FN3529-S SNP T -> A AC=1;AN=188;BQB=0.871314;DP=3966;DP4=2153,1619,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0254665;MQB=0.165419;MQSB=1.67027e-20;RPB=0.762651;SGB=39.8925;VDB=0.422799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.8:7425720 chr08:007425720 0 W/7425720-7425720 FN1372-S Single Base Substitution C-T INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN4088-S.SNP.8:7426132 chr08:007426132 0 W/7426132-7426132 FN4088-S SNP G -> C AC=1;AN=182;BQB=0.99838;DP=3082;DP4=1299,1658,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.4687e-09;MQSB=0.835106;RPB=0.998215;SGB=71.1765;VDB=0.432688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.8:7428212 chr08:007428212 0 W/7428212-7428212 FN2169-S SNP C -> G AC=1;AN=168;BQB=0.5999;DP=2500;DP4=1171,1293,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.24823e-05;MQSB=0.868112;RPB=0.945895;SGB=14.8923;VDB=0.454942;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R490P|502|LOC_Os08g12550|protein_coding|CODING|LOC_Os08g12550.1|2|1) FN3656-S.SNP.8:7436851 chr08:007436851 0 W/7436851-7436851 FN3656-S SNP C -> T AC=1;AN=188;BQB=0.98787;DP=2461;DP4=1199,1182,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00162536;MQB=0.0116869;MQSB=0.672655;RPB=0.74928;SGB=32.5467;VDB=0.371163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.8:7441935 chr08:007441935 0 W/7441935-7441935 FN2532-S SNP A -> G AC=1;AN=198;BQB=0.718582;DP=3968;DP4=1936,1835,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0354e-07;MQSB=0.732707;RPB=0.844297;SGB=58.7391;VDB=0.413893;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P314|568|LOC_Os08g12570|protein_coding|CODING|LOC_Os08g12570.1|3|1) FN989-S.SNP.8:7444728 chr08:007444728 0 W/7444728-7444728 FN989-S Single Base Substitution A-T INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2347.SNP.8:7445606 chr08:007445606 0 W/7445606-7445606 FN2347 SNP G -> A AC=2;AN=192;BQB=0.314142;DP=5392;DP4=2661,2292,34,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.44612e-29;MQSB=0.169177;RPB=0.965692;SGB=-54.0608;VDB=0.680777;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.8:7448841 chr08:007448841 0 W/7448841-7448841 FN851-S Single Base Substitution A-G INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3957-S.SNP.8:7449117 chr08:007449117 0 W/7449117-7449117 FN3957-S SNP A -> T AC=1;AN=168;BQB=0.991476;DP=2795;DP4=1247,1473,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.12837e-05;MQSB=0.463022;RPB=0.261215;SGB=43.3113;VDB=0.0789411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.8:7455762 chr08:007455762 0 W/7455762-7455762 FN3388-S SNP T -> A AC=1;AN=184;BQB=0.912635;DP=2926;DP4=1200,1523,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0560492;MQB=0.410171;MQSB=3.76949e-43;RPB=0.263308;SGB=-16.8012;VDB=0.518915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.8:7459415 chr08:007459415 0 W/7459415-7459415 FN3958-S SNP C -> T AC=1;AN=168;BQB=0.886692;DP=2788;DP4=1223,1459,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00215208;MQB=1.22628e-05;MQSB=0.896412;RPB=0.599761;SGB=47.7421;VDB=0.598947;EFF=INTERGENIC(MODIFIER||||||||||1) FN936-S.SNP.8:7460399 chr08:007460399 0 W/7460399-7460399 FN936-S Single Base Substitution G-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN497-S.SNP.8:7461257 chr08:007461257 0 W/7461257-7461257 FN497-S Single Base Substitution T-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN497-S.SNP.8:7461258 chr08:007461258 0 W/7461258-7461258 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2711-S.SNP.8:7463418 chr08:007463418 0 W/7463418-7463418 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.133628;DP=4353;DP4=2199,1918,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.61532e-05;MQSB=0.780229;RPB=0.502373;SGB=43.8747;VDB=0.936819;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.8:7465806 chr08:007465806 0 W/7465806-7465806 FN855-S Single Base Substitution C-T INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN229-S.SNP.8:7467168 chr08:007467168 0 W/7467168-7467168 FN229-S Single Base Substitution T-C INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN4224-S.SNP.8:7469694 chr08:007469694 0 W/7469694-7469694 FN4224-S SNP T -> C AC=1;AN=170;BQB=0.988512;DP=2389;DP4=1180,1089,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000418585;MQB=3.52197e-11;MQSB=0.211935;RPB=0.996191;SGB=-13.891;VDB=0.999781;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.8:7473581 chr08:007473581 0 W/7473581-7473581 FN1142-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2676-S.SNP.8:7477597 chr08:007477597 0 W/7477597-7477597 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.89975;DP=5199;DP4=2341,2506,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.60165e-09;MQSB=0.839682;RPB=0.842764;SGB=43.8747;VDB=0.758724;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A468T|714|LOC_Os08g12640|protein_coding|CODING|LOC_Os08g12640.1|5|1) FN2387.SNP.8:7479418 chr08:007479418 0 W/7479418-7479418 FN2387 SNP G -> A AC=1;AN=192;BQB=0.956584;DP=5152;DP4=2305,2448,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.39547e-15;MQSB=0.988138;RPB=0.164098;SGB=75.4235;VDB=0.2526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.8:7482310 chr08:007482310 0 W/7482310-7482310 FN1401-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2671-S.SNP.8:7486773 chr08:007486773 0 W/7486773-7486773 FN2671-S SNP C -> A AC=1;AN=200;BQB=0.847827;DP=4801;DP4=2267,2288,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.86072e-08;MQSB=0.947312;RPB=0.998327;SGB=49.6594;VDB=0.0206746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q49K|94|LOC_Os08g12660|protein_coding|CODING|LOC_Os08g12660.1|2|1) FN3347-S.SNP.8:7490626 chr08:007490626 0 W/7490626-7490626 FN3347-S SNP A -> G AC=1;AN=184;BQB=0.964044;DP=3142;DP4=1539,1503,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.55993e-15;MQSB=0.988085;RPB=0.531461;SGB=103.004;VDB=0.442651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q250R|1454|LOC_Os08g12680|protein_coding|CODING|LOC_Os08g12680.1|3|1) FN1224-S.SNP.8:7494630 chr08:007494630 0 W/7494630-7494630 FN1224-S Single Base Substitution T-C INTRON HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1250-S.SNP.8:7510371 chr08:007510371 0 W/7510371-7510371 FN1250-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN2123-S.SNP.8:7512820 chr08:007512820 0 W/7512820-7512820 FN2123-S SNP G -> A AC=2;AN=168;BQB=0.94848;DP=3992;DP4=1851,2063,25,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.25513e-25;MQSB=0.942214;RPB=0.677435;SGB=-244.27;VDB=0.772354;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.8:7516327 chr08:007516327 0 W/7516327-7516327 FN2364 SNP A -> C AC=1;AN=192;BQB=0.892834;DP=4989;DP4=2196,2513,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.97129e-12;MQSB=0.512381;RPB=0.652577;SGB=90.2896;VDB=0.506356;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN-189 Single Base Substitution T-C INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-327.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN-327 Single Base Substitution T-C INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1403-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN1403-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1610-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN1610-S Single Base Substitution T-C INTERGENIC Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2124-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN2124-S SNP T -> C AC=2;AN=168;BQB=0.797644;DP=2489;DP4=950,1450,13,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.24423e-12;MQSB=0.55685;RPB=0.899266;SGB=22.7913;VDB=0.769014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN2360 SNP T -> C AC=1;AN=192;BQB=0.928625;DP=5376;DP4=2801,1982,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.79468e-10;MQSB=0.804229;RPB=0.996751;SGB=-39.2487;VDB=0.51895;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN337-S Single Base Substitution T-C INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3517-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN3517-S SNP T -> C AC=1;AN=188;BQB=0.986327;DP=3982;DP4=2409,1379,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0814e-10;MQSB=0.991538;RPB=0.480268;SGB=57.244;VDB=0.649762;EFF=INTERGENIC(MODIFIER||||||||||1) FN3937-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN3937-S SNP T -> C AC=2;AN=158;BQB=0.730679;DP=3077;DP4=1650,1211,24,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.87604e-21;MQSB=0.390228;RPB=0.987882;SGB=125.049;VDB=0.945596;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN819-S Single Base Substitution T-C INTERGENIC HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN994-S.SNP.8:7516616 chr08:007516616 0 W/7516616-7516616 FN994-S Single Base Substitution T-C INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN1508-S.SNP.8:7518954 chr08:007518954 0 W/7518954-7518954 FN1508-S Single Base Substitution G-A INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1014-S.SNP.8:7521483 chr08:007521483 0 W/7521483-7521483 FN1014-S Single Base Substitution A-G INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN_N1-213-1.SNP.8:7521580 chr08:007521580 0 W/7521580-7521580 FN_N1-213-1 Single Base Substitution G-T HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2656-S.SNP.8:7521889 chr08:007521889 0 W/7521889-7521889 FN2656-S SNP T -> C AC=2;AN=200;BQB=0.759401;DP=5056;DP4=2430,2332,53,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=0;MQSB=0.72069;RPB=0.320933;SGB=296.864;VDB=0.217755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I194V|272|LOC_Os08g12690|protein_coding|CODING|LOC_Os08g12690.1|2|1) FN695-S.SNP.8:7524565 chr08:007524565 0 W/7524565-7524565 FN695-S Single Base Substitution G-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN695-S.SNP.8:7524566 chr08:007524566 0 W/7524566-7524566 FN695-S Single Base Substitution C-T INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1200-S.SNP.8:7524896 chr08:007524896 0 W/7524896-7524896 FN1200-S Single Base Substitution G-A INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-283.SNP.8:7525166 chr08:007525166 0 W/7525166-7525166 FN-283 Single Base Substitution T-A INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1269-S.SNP.8:7531325 chr08:007531325 0 W/7531325-7531325 FN1269-S Single Base Substitution C-T INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2541-S.SNP.8:7531422 chr08:007531422 0 W/7531422-7531422 FN2541-S SNP C -> T AC=1;AN=188;BQB=0.543885;DP=3554;DP4=1778,1515,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.05896e-07;MQSB=0.999664;RPB=0.966466;SGB=72.5245;VDB=0.591626;EFF=INTRON(MODIFIER||||1550|LOC_Os08g12700|protein_coding|CODING|LOC_Os08g12700.1|1|1) FN486-S.SNP.8:7537754 chr08:007537754 0 W/7537754-7537754 FN486-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g12720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3375-S.SNP.8:7539273 chr08:007539273 0 W/7539273-7539273 FN3375-S SNP C -> T AC=1;AN=184;BQB=0.965472;DP=3040;DP4=1532,1443,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30724e-09;MQSB=0.821074;RPB=0.946284;SGB=57.786;VDB=0.694132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.8:7546824 chr08:007546824 0 W/7546824-7546824 FN2428 SNP A -> C AC=1;AN=200;BQB=0.139113;DP=5126;DP4=2535,2316,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.3237e-13;MQSB=0.99982;RPB=0.851778;SGB=76.3213;VDB=0.98866;EFF=INTRON(MODIFIER||||845|LOC_Os08g12740|protein_coding|CODING|LOC_Os08g12740.1|2|1),INTRON(MODIFIER||||845|LOC_Os08g12740|protein_coding|CODING|LOC_Os08g12740.2|2|1) FN2428.SNP.8:7546842 chr08:007546842 0 W/7546842-7546842 FN2428 SNP T -> C AC=1;AN=200;BQB=0.247586;DP=5116;DP4=2429,2369,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.00184e-16;MQSB=0.998188;RPB=0.969321;SGB=-8.87404;VDB=0.678497;EFF=INTRON(MODIFIER||||845|LOC_Os08g12740|protein_coding|CODING|LOC_Os08g12740.1|2|1),INTRON(MODIFIER||||845|LOC_Os08g12740|protein_coding|CODING|LOC_Os08g12740.2|2|1) FN561-S.SNP.8:7553117 chr08:007553117 0 W/7553117-7553117 FN561-S Single Base Substitution T-A INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2538-S.SNP.8:7553779 chr08:007553779 0 W/7553779-7553779 FN2538-S SNP T -> C AC=2;AN=198;BQB=0.903997;DP=4223;DP4=2253,1705,19,20;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000236798;MQB=5.22507e-15;MQSB=0.165213;RPB=0.084274;SGB=130.027;VDB=0.362151;EFF=UTR_5_PRIME(MODIFIER||870||417|LOC_Os08g12750|protein_coding|CODING|LOC_Os08g12750.1|1|1) FN1383-S.SNP.8:7557098 chr08:007557098 0 W/7557098-7557098 FN1383-S Single Base Substitution A-G INTRON HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN985-S.SNP.8:7561703 chr08:007561703 0 W/7561703-7561703 FN985-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g12760 YT521-B, putative, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN915-S.SNP.8:7565437 chr08:007565437 0 W/7565437-7565437 FN915-S Single Base Substitution T-A INTERGENIC HOMO SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN550-S.SNP.8:7565443 chr08:007565443 0 W/7565443-7565443 FN550-S Single Base Substitution A-T INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN459-S.SNP.8:7577360 chr08:007577360 0 W/7577360-7577360 FN459-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g12790 cytokinin inducible protein, putative, expressed SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN3105-S.SNP.8:7579352 chr08:007579352 0 W/7579352-7579352 FN3105-S SNP T -> A AC=1;AN=184;BQB=0.996495;DP=3307;DP4=1429,1673,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.11703e-08;MQSB=0.956825;RPB=0.945628;SGB=25.7969;VDB=0.0680677;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.8:7581533 chr08:007581533 0 W/7581533-7581533 FN742-S Single Base Substitution A-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2178-S.SNP.8:7581685 chr08:007581685 0 W/7581685-7581685 FN2178-S SNP T -> G AC=2;AN=168;BQB=9.99017e-05;DP=4103;DP4=1998,2027,24,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.78297e-21;MQSB=0.965561;RPB=0.910312;SGB=-237.132;VDB=0.185584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.8:7583929 chr08:007583929 0 W/7583929-7583929 FN3442-S SNP C -> A AC=1;AN=184;BQB=0.949622;DP=3189;DP4=1762,1305,10,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.7889e-07;MQSB=0.882867;RPB=0.910175;SGB=28.7043;VDB=0.528324;EFF=UTR_5_PRIME(MODIFIER||105||494|LOC_Os08g12800|protein_coding|CODING|LOC_Os08g12800.1|1|1) FN3718-S.SNP.8:7587043 chr08:007587043 0 W/7587043-7587043 FN3718-S SNP C -> A AC=1;AN=190;BQB=0.92024;DP=2714;DP4=1124,1502,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.28993e-05;MQSB=0.905233;RPB=0.979583;SGB=26.3271;VDB=0.142463;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T190|494|LOC_Os08g12800|protein_coding|CODING|LOC_Os08g12800.1|2|1) FN4260-S.SNP.8:7587653 chr08:007587653 0 W/7587653-7587653 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.997913;DP=2550;DP4=1194,1291,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.96025e-10;MQSB=0.948999;RPB=0.96111;SGB=74.528;VDB=0.685519;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L312|494|LOC_Os08g12800|protein_coding|CODING|LOC_Os08g12800.1|3|1) FN3551-S.SNP.8:7592295 chr08:007592295 0 W/7592295-7592295 FN3551-S SNP T -> C AC=1;AN=188;BQB=0.451166;DP=3075;DP4=1578,1339,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.79694e-06;MQSB=0.986388;RPB=0.671051;SGB=3.99491;VDB=0.270453;EFF=INTRON(MODIFIER||||987|LOC_Os08g12820|protein_coding|CODING|LOC_Os08g12820.1|1|1),INTRON(MODIFIER||||669|LOC_Os08g12820|protein_coding|CODING|LOC_Os08g12820.2|1|1) FN1519-S.SNP.8:7598552 chr08:007598552 0 W/7598552-7598552 FN1519-S Single Base Substitution A-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2751-S.SNP.8:7599595 chr08:007599595 0 W/7599595-7599595 FN2751-S SNP G -> T AC=1;AN=200;BQB=0.236405;DP=4829;DP4=2088,2477,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207082;MQB=2.83189e-11;MQSB=0.982807;RPB=0.998675;SGB=34.6953;VDB=0.659824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.8:7599599 chr08:007599599 0 W/7599599-7599599 FN2751-S SNP C -> A AC=1;AN=200;BQB=0.674053;DP=4822;DP4=2092,2317,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.26486e-12;MQSB=0.984311;RPB=0.994698;SGB=54.6902;VDB=0.488579;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.8:7599600 chr08:007599600 0 W/7599600-7599600 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.535009;DP=4793;DP4=2077,2462,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208638;MQB=8.25011e-11;MQSB=0.988473;RPB=0.963121;SGB=68.0801;VDB=0.599251;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.8:7611204 chr08:007611204 0 W/7611204-7611204 FN405-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. W470-2-1.SNP.8:7616356 chr08:007616356 0 W/7616356-7616356 W470-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3522-S.SNP.8:7616571 chr08:007616571 0 W/7616571-7616571 FN3522-S SNP G -> A AC=2;AN=188;BQB=0.995992;DP=3413;DP4=1638,1684,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.0823e-12;MQSB=0.968322;RPB=0.971391;SGB=67.8739;VDB=0.383855;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.8:7618304 chr08:007618304 0 W/7618304-7618304 FN1630-S Single Base Substitution C-T INTRON HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2095-S.SNP.8:7623878 chr08:007623878 0 W/7623878-7623878 FN2095-S SNP C -> G AC=1;AN=168;BQB=0.503317;DP=2096;DP4=1016,1007,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57808e-07;MQSB=0.996992;RPB=0.818114;SGB=27.0464;VDB=0.934448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.8:7641941 chr08:007641941 0 W/7641941-7641941 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.882894;DP=4109;DP4=1914,1933,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000243368;MQB=9.6129e-12;MQSB=0.808964;RPB=0.812071;SGB=42.3199;VDB=0.772379;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.8:7642844 chr08:007642844 0 W/7642844-7642844 FN764-S Single Base Substitution A-G INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1048-S.SNP.8:7644392 chr08:007644392 0 W/7644392-7644392 FN1048-S Single Base Substitution T-C INTRON HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3595-S.SNP.8:7645272 chr08:007645272 0 W/7645272-7645272 FN3595-S SNP T -> C AC=1;AN=190;BQB=0.811099;DP=2683;DP4=1263,1336,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00670891;MQB=0.114996;MQSB=0.988241;RPB=0.958082;SGB=49.0954;VDB=0.820586;EFF=SPLICE_SITE_REGION(LOW||||632|LOC_Os08g12880|protein_coding|CODING|LOC_Os08g12880.1|3|1),INTRON(MODIFIER||||632|LOC_Os08g12880|protein_coding|CODING|LOC_Os08g12880.1|3|1) FN986-S.SNP.8:7649209 chr08:007649209 0 W/7649209-7649209 FN986-S Single Base Substitution C-T INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3860-S.SNP.8:7655442 chr08:007655442 0 W/7655442-7655442 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.187549;DP=2626;DP4=1361,1178,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.59485e-05;MQSB=0.999781;RPB=0.816452;SGB=40.8124;VDB=0.856618;EFF=INTRON(MODIFIER||||376|LOC_Os08g12890|protein_coding|CODING|LOC_Os08g12890.1|3|1) FN2537-S.SNP.8:7655897 chr08:007655897 0 W/7655897-7655897 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.843977;DP=3714;DP4=1735,1650,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000794947;MQSB=0.489047;RPB=0.528106;SGB=8.58354;VDB=0.103518;EFF=INTRON(MODIFIER||||376|LOC_Os08g12890|protein_coding|CODING|LOC_Os08g12890.1|3|1) FN3606-S.SNP.8:7664785 chr08:007664785 0 W/7664785-7664785 FN3606-S SNP G -> A AC=1;AN=190;BQB=0.949966;DP=2868;DP4=1463,1289,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99854e-06;MQSB=0.928301;RPB=0.999994;SGB=35.4339;VDB=0.799646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.8:7666358 chr08:007666358 0 W/7666358-7666358 FN2740-S SNP T -> C AC=2;AN=200;BQB=0.999838;DP=4836;DP4=2335,2240,16,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27506e-22;MQSB=0.977856;RPB=0.983975;SGB=137.609;VDB=0.900098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.8:7672274 chr08:007672274 0 W/7672274-7672274 FN2467 SNP C -> T AC=1;AN=200;BQB=0.700541;DP=4882;DP4=2048,2506,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29537e-15;MQSB=0.994355;RPB=0.539643;SGB=104.921;VDB=0.38396;EFF=INTRON(MODIFIER||||655|LOC_Os08g12900|protein_coding|CODING|LOC_Os08g12900.1|4|1) FN2648-S.SNP.8:7676779 chr08:007676779 0 W/7676779-7676779 FN2648-S SNP G -> A AC=2;AN=200;BQB=0.934891;DP=4814;DP4=2324,2251,23,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.77386e-29;MQSB=0.553784;RPB=0.965126;SGB=110.245;VDB=0.341665;EFF=INTRON(MODIFIER||||735|LOC_Os08g12910|protein_coding|CODING|LOC_Os08g12910.1|2|1) FN2403.SNP.8:7681223 chr08:007681223 0 W/7681223-7681223 FN2403 SNP A -> G AC=1;AN=200;BQB=0.0725901;DP=4468;DP4=2094,1999,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223814;MQB=1.41436e-06;MQSB=0.665988;RPB=0.805093;SGB=54.2646;VDB=0.496021;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W1111R|1714|LOC_Os08g12920|protein_coding|CODING|LOC_Os08g12920.1|6|1) FN3732-S.SNP.8:7682672 chr08:007682672 0 W/7682672-7682672 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.908072;DP=2996;DP4=1471,1417,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58639e-06;MQSB=0.803805;RPB=0.935248;SGB=25.439;VDB=0.656326;EFF=INTRON(MODIFIER||||1714|LOC_Os08g12920|protein_coding|CODING|LOC_Os08g12920.1|3|1) FN2551-S.SNP.8:7683286 chr08:007683286 0 W/7683286-7683286 FN2551-S SNP G -> T AC=1;AN=198;BQB=0.66102;DP=3835;DP4=1760,1885,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00286832;MQB=4.76093e-11;MQSB=0.750343;RPB=0.978755;SGB=52.7004;VDB=0.668003;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S592*|1714|LOC_Os08g12920|protein_coding|CODING|LOC_Os08g12920.1|2|1);LOF=(LOC_Os08g12920|LOC_Os08g12920|1|1.00);NMD=(LOC_Os08g12920|LOC_Os08g12920|1|1.00) W502-3-4.SNP.8:7684314 chr08:007684314 0 W/7684314-7684314 W502-3-4 Single Base Substitution G-A INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN3968-S.SNP.8:7685490 chr08:007685490 0 W/7685490-7685490 FN3968-S SNP G -> A AC=2;AN=168;BQB=0.953269;DP=2860;DP4=1313,1420,14,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000699301;MQB=3.56299e-20;MQSB=0.786837;RPB=0.77725;SGB=117.088;VDB=0.208011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A56V|1714|LOC_Os08g12920|protein_coding|CODING|LOC_Os08g12920.1|1|1) FN4167-S.SNP.8:7687543 chr08:007687543 0 W/7687543-7687543 FN4167-S SNP A -> T AC=1;AN=170;BQB=0.990292;DP=2395;DP4=1087,1255,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000417537;MQB=3.14287e-06;MQSB=0.999566;RPB=0.751693;SGB=27.9928;VDB=0.589945;EFF=INTRON(MODIFIER||||115|LOC_Os08g12930|protein_coding|CODING|LOC_Os08g12930.1|1|1) FN2584-S.SNP.8:7695265 chr08:007695265 0 W/7695265-7695265 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.252642;DP=3653;DP4=2005,1404,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.85016e-13;MQSB=0.82514;RPB=0.905392;SGB=123.071;VDB=0.58717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.8:7702493 chr08:007702493 0 W/7702493-7702493 FN2205-S SNP G -> A AC=1;AN=190;BQB=0.0206681;DP=5241;DP4=2347,2424,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43677e-14;MQSB=0.0505465;RPB=0.395491;SGB=92.9626;VDB=0.167656;EFF=INTRON(MODIFIER||||239|LOC_Os08g12980|protein_coding|CODING|LOC_Os08g12980.1|1|1) FN2751-S.SNP.8:7708590 chr08:007708590 0 W/7708590-7708590 FN2751-S SNP T -> C AC=1;AN=200;BQB=0.895895;DP=4930;DP4=2530,2141,14,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00588235;MQB=6.44055e-07;MQSB=4.91239e-06;RPB=0.425027;SGB=-10.0844;VDB=0.416234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I959V|1452|LOC_Os08g12990|protein_coding|CODING|LOC_Os08g12990.1|6|1) FN2315.SNP.8:7713684 chr08:007713684 0 W/7713684-7713684 FN2315 SNP T -> A AC=1;AN=192;BQB=0.878083;DP=4766;DP4=2189,2338,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.28102e-18;MQSB=0.93153;RPB=0.973546;SGB=59.6861;VDB=0.621808;EFF=INTRON(MODIFIER||||1452|LOC_Os08g12990|protein_coding|CODING|LOC_Os08g12990.1|1|1) FN4046-S.SNP.8:7717197 chr08:007717197 0 W/7717197-7717197 FN4046-S SNP T -> C AC=1;AN=168;BQB=0.869035;DP=2488;DP4=1250,1161,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.03113e-05;MQSB=0.871556;RPB=0.859689;SGB=17.5943;VDB=0.691871;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.8:7721593 chr08:007721593 0 W/7721593-7721593 FN4148-S SNP G -> T AC=2;AN=170;BQB=0.692749;DP=2495;DP4=1090,1299,10,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.01177e-08;MQSB=0.973961;RPB=0.978389;SGB=78.9707;VDB=0.893246;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.8:7721663 chr08:007721663 0 W/7721663-7721663 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.819202;DP=3195;DP4=1723,1403,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.02295e-08;MQSB=0.99912;RPB=0.897628;SGB=20.7533;VDB=0.630944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.8:7724047 chr08:007724047 0 W/7724047-7724047 FN2471 SNP G -> C AC=1;AN=200;BQB=0.684362;DP=3909;DP4=1690,1919,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45787e-09;MQSB=0.672354;RPB=0.283914;SGB=51.0851;VDB=0.652558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.8:7725644 chr08:007725644 0 W/7725644-7725644 FN3663-S SNP G -> A AC=1;AN=190;BQB=0.967779;DP=2681;DP4=1101,1485,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.98793e-11;MQSB=0.971626;RPB=0.436221;SGB=50.3161;VDB=0.115307;EFF=INTRON(MODIFIER||||181|LOC_Os08g13010|protein_coding|CODING|LOC_Os08g13010.1|2|1) FN2124-S.SNP.8:7729375 chr08:007729375 0 W/7729375-7729375 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.391817;DP=4734;DP4=2459,2213,16,19;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0016899;MQB=6.81368e-11;MQSB=4.30292e-11;RPB=0.870751;SGB=-205.173;VDB=0.963567;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.8:7731067 chr08:007731067 0 W/7731067-7731067 FN2385 SNP A -> G AC=2;AN=192;BQB=0.999951;DP=4533;DP4=2392,1752,27,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.14762e-32;MQSB=0.998806;RPB=0.819682;SGB=71.4931;VDB=0.332299;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T71|76|LOC_Os08g13014|protein_coding|CODING|LOC_Os08g13014.1|2|1) FN3810-S.SNP.8:7734492 chr08:007734492 0 W/7734492-7734492 FN3810-S SNP C -> A AC=1;AN=190;BQB=0.946551;DP=3028;DP4=1344,1578,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00330251;MQB=0.0119658;MQSB=0.0899636;RPB=0.787648;SGB=30.8803;VDB=0.538025;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.8:7744849 chr08:007744849 0 W/7744849-7744849 FN1563-S Single Base Substitution G-A INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2662-S.SNP.8:7751101 chr08:007751101 0 W/7751101-7751101 FN2662-S SNP C -> A AC=1;AN=200;BQB=0.835239;DP=4546;DP4=2413,1909,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96926e-07;MQSB=0.998253;RPB=0.953304;SGB=29.4541;VDB=0.0107754;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.8:7752170 chr08:007752170 0 W/7752170-7752170 FN576-S Single Base Substitution T-C INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN466-S.SNP.8:7756405 chr08:007756405 0 W/7756405-7756405 FN466-S Single Base Substitution G-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN3598-S.SNP.8:7757861 chr08:007757861 0 W/7757861-7757861 FN3598-S SNP G -> A AC=2;AN=188;BQB=0.999992;DP=3295;DP4=1452,1739,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.14465e-20;MQSB=0.958305;RPB=0.660121;SGB=106.85;VDB=0.860469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A64V|386|LOC_Os08g13060|protein_coding|CODING|LOC_Os08g13060.1|1|1) FN3598-S.SNP.8:7757862 chr08:007757862 0 W/7757862-7757862 FN3598-S SNP C -> A AC=2;AN=188;BQB=0.859129;DP=3290;DP4=1450,1723,12,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.05564e-20;MQSB=0.92077;RPB=0.496197;SGB=99.7635;VDB=0.908647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A64S|386|LOC_Os08g13060|protein_coding|CODING|LOC_Os08g13060.1|1|1) FN1276-S.SNP.8:7762677 chr08:007762677 0 W/7762677-7762677 FN1276-S Single Base Substitution G-A INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN2583-S.SNP.8:7775581 chr08:007775581 0 W/7775581-7775581 FN2583-S SNP A -> T AC=1;AN=200;BQB=0.523405;DP=4996;DP4=2641,2159,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25021e-10;MQSB=0.928404;RPB=0.809149;SGB=68.0801;VDB=0.34175;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.8:7779082 chr08:007779082 0 W/7779082-7779082 FN-258 Single Base Substitution C-T INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2735-S.SNP.8:7779656 chr08:007779656 0 W/7779656-7779656 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.802537;DP=5037;DP4=2482,2250,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.46068e-08;MQSB=0.999603;RPB=0.8185;SGB=16.4591;VDB=0.824093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.8:7779747 chr08:007779747 0 W/7779747-7779747 FN2377 SNP T -> C AC=1;AN=192;BQB=0.235065;DP=5171;DP4=2134,2662,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.87011e-08;MQSB=0.891046;RPB=0.069066;SGB=53.7748;VDB=0.106188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.8:7785689 chr08:007785689 0 W/7785689-7785689 FN2192-S SNP G -> T AC=1;AN=190;BQB=0.934433;DP=4482;DP4=2106,1841,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.39719e-06;MQSB=0.0166936;RPB=0.356467;SGB=49.0954;VDB=0.065806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.8:7788777 chr08:007788777 0 W/7788777-7788777 FN2435 SNP T -> C AC=1;AN=200;BQB=0.891201;DP=5223;DP4=2590,2213,10,13;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.180165;MQB=0.817368;MQSB=0;RPB=0.90369;SGB=100.316;VDB=0.12098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.8:7796863 chr08:007796863 0 W/7796863-7796863 FN2489 SNP T -> A AC=2;AN=200;BQB=0.662579;DP=5153;DP4=2761,2040,22,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.85881e-17;MQSB=0.996717;RPB=0.700313;SGB=35.1726;VDB=0.740164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.8:7803629 chr08:007803629 0 W/7803629-7803629 FN3659-S SNP A -> G AC=1;AN=190;BQB=0.999796;DP=3061;DP4=1621,1320,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09225e-06;MQSB=0.79357;RPB=0.779304;SGB=32.5467;VDB=0.398191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.8:7804279 chr08:007804279 0 W/7804279-7804279 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.988638;DP=4447;DP4=2101,2093,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.06294e-08;MQSB=0.776499;RPB=0.585601;SGB=33.0593;VDB=0.423076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.8:7809189 chr08:007809189 0 W/7809189-7809189 FN1750-S SNP G -> A AC=2;AN=188;BQB=0.0136688;DP=2310;DP4=882,1364,15,21;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0203463;MQB=0.000133895;MQSB=2.49691e-06;RPB=0.25082;SGB=85.5381;VDB=0.670307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.8:7812418 chr08:007812418 0 W/7812418-7812418 FN2242-S SNP G -> T AC=2;AN=190;BQB=0.964925;DP=3284;DP4=2162,916,10,5;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00121803;MQB=2.07534e-05;MQSB=0.108405;RPB=0.977535;SGB=62.7569;VDB=0.722387;EFF=INTRON(MODIFIER||||1108|LOC_Os08g13150|protein_coding|CODING|LOC_Os08g13150.1|5|1) FN1115-S.SNP.8:7815455 chr08:007815455 0 W/7815455-7815455 FN1115-S Single Base Substitution C-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3697-S.SNP.8:7819873 chr08:007819873 0 W/7819873-7819873 FN3697-S SNP A -> T AC=1;AN=190;BQB=0.904056;DP=2916;DP4=1370,1375,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.64411e-10;MQSB=0.913195;RPB=0.900277;SGB=33.8752;VDB=0.573587;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.8:7820314 chr08:007820314 0 W/7820314-7820314 FN4104-S SNP G -> A AC=1;AN=182;BQB=0.906456;DP=2504;DP4=827,1615,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.44541e-09;MQSB=0.68253;RPB=0.280263;SGB=42.6494;VDB=0.288116;EFF=INTRON(MODIFIER||||59|LOC_Os08g13160|protein_coding|CODING|LOC_Os08g13160.1|1|1) FN2795-S.SNP.8:7823297 chr08:007823297 0 W/7823297-7823297 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.986769;DP=3202;DP4=1625,1444,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0306059;MQB=0.434563;MQSB=0.191878;RPB=0.0150147;SGB=35.7638;VDB=0.347684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.8:7827670 chr08:007827670 0 W/7827670-7827670 FN2407 SNP C -> T AC=1;AN=200;BQB=0.282478;DP=5511;DP4=2195,3050,11,4;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0499002;MQB=0.0135861;MQSB=1.8482e-40;RPB=0.929666;SGB=43.8747;VDB=0.852252;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R1075K|1484|LOC_Os08g13170|protein_coding|CODING|LOC_Os08g13170.1|8|1) FN2611-S.SNP.8:7834188 chr08:007834188 0 W/7834188-7834188 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.936155;DP=5035;DP4=2383,2265,29,31;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.5125e-31;MQSB=0.961494;RPB=0.93123;SGB=141.507;VDB=0.581614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.8:7839542 chr08:007839542 0 W/7839542-7839542 FN2237-S SNP T -> G AC=1;AN=190;BQB=0.341132;DP=3477;DP4=1551,1318,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000287604;MQB=1.61631e-06;MQSB=1.95108e-07;RPB=0.839088;SGB=11.8805;VDB=0.05054;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.8:7846910 chr08:007846910 0 W/7846910-7846910 FN728-S Single Base Substitution A-C INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2646-S.SNP.8:7849030 chr08:007849030 0 W/7849030-7849030 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.603203;DP=5339;DP4=2706,2327,24,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000749204;MQB=1.35835e-09;MQSB=0.999714;RPB=0.869733;SGB=36.7778;VDB=0.0738403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.8:7851405 chr08:007851405 0 W/7851405-7851405 FN1636-S Single Base Substitution G-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN-117.SNP.8:7853624 chr08:007853624 0 W/7853624-7853624 FN-117 Single Base Substitution C-A INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN1453-S.SNP.8:7854250 chr08:007854250 0 W/7854250-7854250 FN1453-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2215-S.SNP.8:7854352 chr08:007854352 0 W/7854352-7854352 FN2215-S SNP G -> T AC=1;AN=190;BQB=0.930883;DP=5049;DP4=2251,2468,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.16734e-13;MQSB=0.725608;RPB=0.992714;SGB=78.7471;VDB=0.39707;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.8:7854425 chr08:007854425 0 W/7854425-7854425 FN795-S Single Base Substitution T-A INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2483.SNP.8:7854792 chr08:007854792 0 W/7854792-7854792 FN2483 SNP C -> T AC=1;AN=200;BQB=0.667694;DP=4497;DP4=1914,2061,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32201e-15;MQSB=0.000784631;RPB=0.888397;SGB=132.552;VDB=0.0785021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.8:7855079 chr08:007855079 0 W/7855079-7855079 FN3893-S SNP A -> T AC=1;AN=158;BQB=0.893651;DP=2182;DP4=1027,1040,13,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.57364e-09;MQSB=0.866286;RPB=0.862639;SGB=6.19449;VDB=0.620206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.8:7873025 chr08:007873025 0 W/7873025-7873025 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.982162;DP=3810;DP4=1608,2096,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.19685;MQB=0.365164;MQSB=0;RPB=0.803477;SGB=28.3187;VDB=0.452489;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.8:7873297 chr08:007873297 0 W/7873297-7873297 FN3841-S SNP A -> G AC=1;AN=190;BQB=0.903574;DP=3085;DP4=1719,1259,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.06319e-07;MQSB=0.033214;RPB=0.983824;SGB=32.5467;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.8:7874269 chr08:007874269 0 W/7874269-7874269 FN2664-S SNP A -> T AC=1;AN=200;BQB=0.997895;DP=5056;DP4=2450,2296,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15845e-12;MQSB=0.823109;RPB=0.923196;SGB=81.8956;VDB=0.96197;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.8:7876885 chr08:007876885 0 W/7876885-7876885 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.561685;DP=3051;DP4=1559,1402,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75875e-07;MQSB=0.96911;RPB=0.989446;SGB=18.4463;VDB=0.930523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.8:7885733 chr08:007885733 0 W/7885733-7885733 FN2134-S SNP T -> A AC=2;AN=168;BQB=0.997506;DP=2320;DP4=1331,937,19,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.29705e-22;MQSB=0.98781;RPB=0.975441;SGB=47.2954;VDB=0.00942445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.8:7885734 chr08:007885734 0 W/7885734-7885734 FN2134-S SNP T -> A AC=2;AN=168;BQB=0.911459;DP=2330;DP4=1337,936,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87647e-21;MQSB=0.985877;RPB=0.972106;SGB=-5.89455;VDB=0.0274687;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.8:7888086 chr08:007888086 0 W/7888086-7888086 FN1596-S Single Base Substitution A-C INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1460-S.SNP.8:7896779 chr08:007896779 0 W/7896779-7896779 FN1460-S Single Base Substitution T-C INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2472.SNP.8:7904815 chr08:007904815 0 W/7904815-7904815 FN2472 SNP G -> A AC=1;AN=200;BQB=0.866789;DP=4161;DP4=2107,1803,11,8;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.119683;MQB=0.81932;MQSB=1.27821e-32;RPB=0.994287;SGB=11.0951;VDB=0.331391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A360T|1162|LOC_Os08g13300|protein_coding|CODING|LOC_Os08g13300.1|2|1) FN3903-S.SNP.8:7916324 chr08:007916324 0 W/7916324-7916324 FN3903-S SNP G -> C AC=1;AN=158;BQB=0.96851;DP=2685;DP4=1347,1233,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.52637e-09;MQSB=0.998329;RPB=0.999295;SGB=37.4429;VDB=0.476417;EFF=UTR_3_PRIME(MODIFIER||2122||182|LOC_Os08g13320|protein_coding|CODING|LOC_Os08g13320.1|3|1) FN465-S.SNP.8:7922414 chr08:007922414 0 W/7922414-7922414 FN465-S Single Base Substitution G-A INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN477-S.SNP.8:7933572 chr08:007933572 0 W/7933572-7933572 FN477-S Single Base Substitution C-A INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1476-S.SNP.8:7935184 chr08:007935184 0 W/7935184-7935184 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. 705-6.SNP.8:7940358 chr08:007940358 0 W/7940358-7940358 705-6 Single Base Substitution T-C INTRON Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN447-S.SNP.8:7943333 chr08:007943333 0 W/7943333-7943333 FN447-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g13350 expressed protein SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2297.SNP.8:7950822 chr08:007950822 0 W/7950822-7950822 FN2297 SNP T -> C AC=1;AN=192;BQB=0.268698;DP=3348;DP4=866,2112,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000896057;MQB=9.83224e-05;MQSB=0;RPB=0.697265;SGB=49.2105;VDB=0.750182;EFF=INTRON(MODIFIER||||448|LOC_Os08g13360|protein_coding|CODING|LOC_Os08g13360.1|1|1),INTRON(MODIFIER||||448|LOC_Os08g13360|protein_coding|CODING|LOC_Os08g13360.2|1|1) FN1152-S.SNP.8:7956133 chr08:007956133 0 W/7956133-7956133 FN1152-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2286.SNP.8:7961376 chr08:007961376 0 W/7961376-7961376 FN2286 SNP T -> C AC=2;AN=192;BQB=0.956076;DP=5091;DP4=2266,2480,25,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.02773e-21;MQSB=0.990432;RPB=0.889359;SGB=181.577;VDB=0.147894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.8:7970379 chr08:007970379 0 W/7970379-7970379 FN3395-S SNP T -> C AC=2;AN=184;BQB=0.996768;DP=2901;DP4=1164,1537,16,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.46023e-19;MQSB=0.948917;RPB=0.947684;SGB=166.309;VDB=0.194549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.8:7970849 chr08:007970849 0 W/7970849-7970849 FN2178-S SNP G -> C AC=2;AN=168;BQB=0.0239061;DP=4022;DP4=1949,1990,33,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.92325e-26;MQSB=0.924906;RPB=0.927389;SGB=-208.537;VDB=0.95393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.8:7970929 chr08:007970929 0 W/7970929-7970929 FN3472-S SNP C -> A AC=1;AN=184;BQB=0.928805;DP=2391;DP4=1172,1132,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.20327e-08;MQSB=0.996945;RPB=0.933598;SGB=48.7425;VDB=0.310712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.8:7980855 chr08:007980855 0 W/7980855-7980855 FN2441 SNP T -> C AC=2;AN=200;BQB=0.177491;DP=4538;DP4=1946,2019,33,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.61461e-32;MQSB=0.782541;RPB=0.945994;SGB=126.093;VDB=0.690002;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.8:7985064 chr08:007985064 0 W/7985064-7985064 FN425-S Single Base Substitution G-T INTRON HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN3823-S.SNP.8:7985785 chr08:007985785 0 W/7985785-7985785 FN3823-S SNP C -> G AC=1;AN=190;BQB=0.940332;DP=2670;DP4=1418,1143,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20986e-05;MQSB=0.971965;RPB=0.704221;SGB=35.4339;VDB=0.472523;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.8:7997814 chr08:007997814 0 W/7997814-7997814 FN509-S Single Base Substitution G-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3468-S.SNP.8:8003613 chr08:008003613 0 W/8003613-8003613 FN3468-S SNP G -> T AC=1;AN=184;BQB=0.673108;DP=2951;DP4=1421,1372,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.175873;MQB=0.483997;MQSB=0;RPB=0.116902;SGB=53.3568;VDB=0.249373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.8:8004312 chr08:008004312 0 W/8004312-8004312 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.98351;DP=5128;DP4=2200,2652,11,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0118955;MQB=0.0946562;MQSB=0.999753;RPB=0.996573;SGB=72.7161;VDB=0.867642;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.8:8010889 chr08:008010889 0 W/8010889-8010889 FN-402 Single Base Substitution T-A INTERGENIC HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN402-S.SNP.8:8010889 chr08:008010889 0 W/8010889-8010889 FN402-S Single Base Substitution T-A INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN-269.SNP.8:8012901 chr08:008012901 0 W/8012901-8012901 FN-269 Single Base Substitution T-C INTRON HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3887-S.SNP.8:8015298 chr08:008015298 0 W/8015298-8015298 FN3887-S SNP C -> T AC=2;AN=158;BQB=0.84442;DP=2563;DP4=1236,1227,18,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.77679e-23;MQSB=0.899031;RPB=0.990863;SGB=156.303;VDB=0.84549;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.8:8015298 chr08:008015298 0 W/8015298-8015298 W360-2S-2 Single Base Substitution C-T INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1442-S.SNP.8:8020293 chr08:008020293 0 W/8020293-8020293 FN1442-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN728-S.SNP.8:8030686 chr08:008030686 0 W/8030686-8030686 FN728-S Single Base Substitution C-T INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN4069-S.SNP.8:8032931 chr08:008032931 0 W/8032931-8032931 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.987451;DP=3117;DP4=1449,1598,14,19;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.26533e-18;MQSB=0.889057;RPB=0.449329;SGB=105.845;VDB=0.147442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S208L|727|LOC_Os08g13500|protein_coding|CODING|LOC_Os08g13500.1|2|1) FN3637-S.SNP.8:8035846 chr08:008035846 0 W/8035846-8035846 FN3637-S SNP C -> G AC=1;AN=190;BQB=0.99652;DP=3027;DP4=1326,1558,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20394e-09;MQSB=0.829037;RPB=0.961628;SGB=43.2083;VDB=0.451525;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S591|592|LOC_Os08g13510|protein_coding|CODING|LOC_Os08g13510.1|5|1) FN1047-S.SNP.8:8036405 chr08:008036405 0 W/8036405-8036405 FN1047-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g13510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN925-S.SNP.8:8039851 chr08:008039851 0 W/8039851-8039851 FN925-S Single Base Substitution G-A STOP_GAINED HET LOC_Os08g13520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN-315.SNP.8:8046584 chr08:008046584 0 W/8046584-8046584 FN-315 Single Base Substitution A-T INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2230-S.SNP.8:8046584 chr08:008046584 0 W/8046584-8046584 FN2230-S SNP A -> T AC=1;AN=190;BQB=0.896811;DP=4824;DP4=2205,2182,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207297;MQB=8.44217e-13;MQSB=0.358332;RPB=0.927922;SGB=19.6499;VDB=0.445038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.8:8046584 chr08:008046584 0 W/8046584-8046584 FN2307 SNP A -> T AC=1;AN=192;BQB=0.995974;DP=4877;DP4=2293,2231,22,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.22066e-22;MQSB=0.822987;RPB=0.201083;SGB=1.03308;VDB=0.200213;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.8:8049233 chr08:008049233 0 W/8049233-8049233 FN727-S Single Base Substitution T-A INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN-294.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN-294 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN1030-S.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN1030-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2129-S.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN2129-S SNP C -> T AC=2;AN=168;BQB=0.652298;DP=2181;DP4=872,1226,16,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.74209e-22;MQSB=0.976106;RPB=0.970589;SGB=121.192;VDB=0.0787898;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T190M|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|1|1) FN2221-S.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.157563;DP=4476;DP4=2010,2158,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.2892e-07;MQSB=0.31777;RPB=0.941826;SGB=36.1006;VDB=0.326671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T190M|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|1|1) FN2344.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN2344 SNP C -> T AC=2;AN=192;BQB=0.881562;DP=4956;DP4=2310,2297,35,41;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.41786e-37;MQSB=0.362098;RPB=0.250195;SGB=250.665;VDB=0.522622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T190M|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|1|1) FN2429.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN2429 SNP C -> T AC=2;AN=200;BQB=0.4834;DP=4548;DP4=2104,2155,27,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000219877;MQB=9.3871e-25;MQSB=0.306599;RPB=0.990501;SGB=128.481;VDB=0.959863;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T190M|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|1|1) FN3786-S.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN3786-S SNP C -> T AC=2;AN=190;BQB=0.975309;DP=3697;DP4=1713,1876,8,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.81464e-16;MQSB=0.946516;RPB=0.863847;SGB=22.7576;VDB=0.872446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T190M|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|1|1) FN621-S.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 FN621-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. W427-1-1.SNP.8:8049933 chr08:008049933 0 W/8049933-8049933 W427-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2788-S.SNP.8:8050982 chr08:008050982 0 W/8050982-8050982 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.693731;DP=3745;DP4=1692,1846,17,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08142e-08;MQSB=0.955182;RPB=0.903627;SGB=76.1002;VDB=0.845044;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L322I|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|3|1) FN2338.SNP.8:8051819 chr08:008051819 0 W/8051819-8051819 FN2338 SNP A -> T AC=1;AN=192;BQB=0.968003;DP=4369;DP4=1924,1905,16,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.33574e-10;MQSB=0.506904;RPB=0.920416;SGB=18.3052;VDB=0.343716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I601F|720|LOC_Os08g13540|protein_coding|CODING|LOC_Os08g13540.1|3|1) FN3463-S.SNP.8:8053938 chr08:008053938 0 W/8053938-8053938 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.845165;DP=3218;DP4=1458,1678,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52853e-07;MQSB=0.999958;RPB=0.260067;SGB=35.7479;VDB=0.457171;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A160|231|LOC_Os08g13550|protein_coding|CODING|LOC_Os08g13550.1|2|1) FN3637-S.SNP.8:8058461 chr08:008058461 0 W/8058461-8058461 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.934891;DP=2944;DP4=1506,1335,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.78073e-09;MQSB=0.825002;RPB=0.995912;SGB=39.6545;VDB=0.233501;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.8:8058628 chr08:008058628 0 W/8058628-8058628 FN680-S Single Base Substitution C-T INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3418-S.SNP.8:8071013 chr08:008071013 0 W/8071013-8071013 FN3418-S SNP A -> T AC=1;AN=184;BQB=0.718648;DP=2526;DP4=832,1513,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.82919e-08;MQSB=0.841106;RPB=0.74897;SGB=20.7533;VDB=0.164817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.8:8072880 chr08:008072880 0 W/8072880-8072880 FN3906-S SNP A -> T AC=1;AN=158;BQB=0.994888;DP=2450;DP4=1257,1102,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.67933e-06;MQSB=0.277589;RPB=0.867545;SGB=30.704;VDB=0.349734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.8:8073141 chr08:008073141 0 W/8073141-8073141 FN1693-S SNP A -> G AC=1;AN=188;BQB=0.226376;DP=4168;DP4=2048,2086,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29753e-09;MQSB=0.33569;RPB=0.654213;SGB=26.0762;VDB=0.111079;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.8:8086870 chr08:008086870 0 W/8086870-8086870 FN850-S Single Base Substitution A-C INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN504-S.SNP.8:8104073 chr08:008104073 0 W/8104073-8104073 FN504-S Single Base Substitution A-G INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2237-S.SNP.8:8104361 chr08:008104361 0 W/8104361-8104361 FN2237-S SNP C -> A AC=1;AN=190;BQB=0.897105;DP=5180;DP4=2761,2047,17,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00019305;MQB=3.99262e-11;MQSB=0.518121;RPB=0.292787;SGB=41.5369;VDB=0.968974;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.8:8117334 chr08:008117334 0 W/8117334-8117334 FN678-S Single Base Substitution T-A INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2724-S.SNP.8:8120347 chr08:008120347 0 W/8120347-8120347 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.383821;DP=4419;DP4=2004,2063,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19466e-08;MQSB=0.88636;RPB=0.558169;SGB=34.6953;VDB=0.243631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H111Y|332|LOC_Os08g13650|protein_coding|CODING|LOC_Os08g13650.1|2|1) FN-69.SNP.8:8122590 chr08:008122590 0 W/8122590-8122590 FN-69 Single Base Substitution C-G INTRON HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN4156-S.SNP.8:8123708 chr08:008123708 0 W/8123708-8123708 FN4156-S SNP T -> C AC=1;AN=170;BQB=0.987649;DP=2541;DP4=1314,1100,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.23588e-08;MQSB=0.697202;RPB=0.0144782;SGB=4.33246;VDB=0.0223883;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.8:8130659 chr08:008130659 0 W/8130659-8130659 FN321-S Single Base Substitution C-A INTERGENIC HOMO SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2271-S.SNP.8:8140699 chr08:008140699 0 W/8140699-8140699 FN2271-S SNP T -> A AC=2;AN=190;BQB=0.489123;DP=4722;DP4=2156,2306,24,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.41857e-24;MQSB=0.297815;RPB=0.392427;SGB=156.932;VDB=0.805835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.8:8144557 chr08:008144557 0 W/8144557-8144557 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.733798;DP=4817;DP4=2176,2355,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.86111e-12;MQSB=0.987505;RPB=0.82221;SGB=103.742;VDB=0.260573;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.8:8146408 chr08:008146408 0 W/8146408-8146408 FN503-S Single Base Substitution A-G INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2376.SNP.8:8147073 chr08:008147073 0 W/8147073-8147073 FN2376 SNP T -> A AC=1;AN=192;BQB=0.901226;DP=4834;DP4=2179,2259,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.22061e-07;MQSB=0.729083;RPB=0.627891;SGB=36.2157;VDB=0.271929;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.8:8147074 chr08:008147074 0 W/8147074-8147074 FN2376 SNP C -> A AC=1;AN=192;BQB=0.0353022;DP=4823;DP4=2255,2341,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.48296e-09;MQSB=0.866721;RPB=0.986503;SGB=-14.7687;VDB=0.101526;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.8:8149917 chr08:008149917 0 W/8149917-8149917 FN1557-S Single Base Substitution T-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN4229-S.SNP.8:8152409 chr08:008152409 0 W/8152409-8152409 FN4229-S SNP G -> A AC=2;AN=170;BQB=0.707645;DP=2347;DP4=1299,930,11,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.48834e-10;MQSB=0.668387;RPB=0.852461;SGB=114.512;VDB=0.360734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.8:8158844 chr08:008158844 0 W/8158844-8158844 FN2378 SNP A -> T AC=1;AN=192;BQB=0.840071;DP=4851;DP4=1977,2374,17,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.52995e-15;MQSB=0.862195;RPB=0.620964;SGB=77.6365;VDB=0.608387;EFF=INTERGENIC(MODIFIER||||||||||1) FN-50.SNP.8:8159977 chr08:008159977 0 W/8159977-8159977 FN-50 Single Base Substitution T-G UTR_3_PRIME Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN2146-S.SNP.8:8165254 chr08:008165254 0 W/8165254-8165254 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.00965858;DP=4527;DP4=2117,2376,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44201e-07;MQSB=0.999977;RPB=0.774775;SGB=-14.5109;VDB=0.457877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.8:8174039 chr08:008174039 0 W/8174039-8174039 FN3512-S SNP G -> A AC=1;AN=188;BQB=0.99413;DP=2630;DP4=1396,1173,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21848e-05;MQSB=0.995597;RPB=0.963314;SGB=30.8063;VDB=0.308129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.8:8175017 chr08:008175017 0 W/8175017-8175017 FN3957-S SNP G -> T AC=1;AN=168;BQB=0.948844;DP=2941;DP4=1426,1374,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.43974e-06;MQSB=0.980534;RPB=0.643869;SGB=47.7421;VDB=0.913441;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.8:8175586 chr08:008175586 0 W/8175586-8175586 FN-127 Single Base Substitution A-G INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2339.SNP.8:8187538 chr08:008187538 0 W/8187538-8187538 FN2339 SNP G -> A AC=1;AN=192;BQB=0.609143;DP=4418;DP4=2209,1975,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.193753;MQB=0.906614;MQSB=0.00102176;RPB=0.638294;SGB=25.5227;VDB=0.913584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.8:8187614 chr08:008187614 0 W/8187614-8187614 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.987532;DP=2198;DP4=1160,878,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.188353;MQB=0.42275;MQSB=0;RPB=0.999801;SGB=44.5415;VDB=0.866362;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.8:8203753 chr08:008203753 0 W/8203753-8203753 FN901-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g13760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2634-S.SNP.8:8208359 chr08:008208359 0 W/8208359-8208359 FN2634-S SNP G -> A AC=1;AN=200;BQB=0.974985;DP=4523;DP4=2004,2262,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34023e-16;MQSB=0.941514;RPB=0.0543983;SGB=27.1468;VDB=0.100295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.8:8211504 chr08:008211504 0 W/8211504-8211504 FN3357-S SNP C -> T AC=1;AN=184;BQB=0.531632;DP=2852;DP4=1405,1189,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0284011;MQB=0.143498;MQSB=0.294137;RPB=0.875252;SGB=39.699;VDB=0.549935;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.8:8216340 chr08:008216340 0 W/8216340-8216340 FN-131 Single Base Substitution T-A INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN3545-S.SNP.8:8224603 chr08:008224603 0 W/8224603-8224603 FN3545-S SNP C -> T AC=1;AN=188;BQB=0.989536;DP=3049;DP4=1365,1624,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000169584;MQSB=0.936243;RPB=0.985173;SGB=39.8925;VDB=0.434691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R51Q|173|LOC_Os08g13795|protein_coding|CODING|LOC_Os08g13795.1|1|1) FN483-S.SNP.8:8226718 chr08:008226718 0 W/8226718-8226718 FN483-S Single Base Substitution T-C INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN-168.SNP.8:8227896 chr08:008227896 0 W/8227896-8227896 FN-168 Single Base Substitution T-C INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2308.SNP.8:8233340 chr08:008233340 0 W/8233340-8233340 FN2308 SNP A -> G AC=1;AN=192;BQB=1.95534e-05;DP=5025;DP4=2070,2307,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=6.99356e-08;MQSB=0.947074;RPB=0.639716;SGB=-110.748;VDB=0.875169;EFF=INTRON(MODIFIER||||890|LOC_Os08g13800|protein_coding|CODING|LOC_Os08g13800.1|2|1) FN2231-S.SNP.8:8236767 chr08:008236767 0 W/8236767-8236767 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.0971096;DP=4727;DP4=2398,1902,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000211551;MQB=1.0976e-05;MQSB=0.265561;RPB=0.417287;SGB=-35.4322;VDB=0.802788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.8:8242220 chr08:008242220 0 W/8242220-8242220 FN1339-S Single Base Substitution G-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN618-S.SNP.8:8245410 chr08:008245410 0 W/8245410-8245410 FN618-S Single Base Substitution G-A INTRON HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN618-S.SNP.8:8245618 chr08:008245618 0 W/8245618-8245618 FN618-S Single Base Substitution A-G INTRON HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN2312.SNP.8:8247375 chr08:008247375 0 W/8247375-8247375 FN2312 SNP G -> A AC=1;AN=192;BQB=0.991977;DP=4242;DP4=2144,1618,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.12961e-09;MQSB=0.000785537;RPB=0.817048;SGB=41.7357;VDB=0.960858;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q886|995|LOC_Os08g13810|protein_coding|CODING|LOC_Os08g13810.1|7|1) FN1423-S.SNP.8:8248578 chr08:008248578 0 W/8248578-8248578 FN1423-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4046-S.SNP.8:8249505 chr08:008249505 0 W/8249505-8249505 FN4046-S SNP C -> G AC=1;AN=168;BQB=0.510986;DP=2727;DP4=1131,1452,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.6326e-06;MQSB=0.00356151;RPB=0.00272907;SGB=69.8961;VDB=0.321158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.8:8253808 chr08:008253808 0 W/8253808-8253808 FN1490-S Single Base Substitution T-A INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN438-S.SNP.8:8253819 chr08:008253819 0 W/8253819-8253819 FN438-S Single Base Substitution C-T INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN1722-S.SNP.8:8254617 chr08:008254617 0 W/8254617-8254617 FN1722-S SNP A -> G AC=1;AN=188;BQB=0.718591;DP=4165;DP4=1878,2241,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22051e-10;MQSB=0.970893;RPB=0.91111;SGB=-40.5615;VDB=0.592816;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.8:8265829 chr08:008265829 0 W/8265829-8265829 FN836-S Single Base Substitution G-A INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1674-S.SNP.8:8274837 chr08:008274837 0 W/8274837-8274837 FN1674-S SNP G -> A AC=1;AN=188;BQB=0.884891;DP=3746;DP4=1411,2300,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.61032e-05;MQSB=2.09884e-12;RPB=0.923857;SGB=31.1628;VDB=0.434613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.8:8276829 chr08:008276829 0 W/8276829-8276829 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.214147;DP=5092;DP4=2409,2450,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.57559e-14;MQSB=0.99971;RPB=0.311031;SGB=47.7211;VDB=0.593443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A830T|902|LOC_Os08g13860|protein_coding|CODING|LOC_Os08g13860.1|3|1) FN3905-S.SNP.8:8277153 chr08:008277153 0 W/8277153-8277153 FN3905-S SNP T -> C AC=2;AN=158;BQB=0.958843;DP=2338;DP4=1007,1144,12,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000427716;MQB=1.94381e-14;MQSB=0.796765;RPB=0.956889;SGB=52.2521;VDB=0.249284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K722E|902|LOC_Os08g13860|protein_coding|CODING|LOC_Os08g13860.1|3|1) FN2549-S.SNP.8:8285311 chr08:008285311 0 W/8285311-8285311 FN2549-S SNP C -> T AC=1;AN=198;BQB=0.43673;DP=4109;DP4=1838,2070,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00243368;MQB=0.0047799;MQSB=0.00129664;RPB=0.0870759;SGB=-5.00654;VDB=0.605799;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L8|790|LOC_Os08g13870|protein_coding|CODING|LOC_Os08g13870.1|1|1) FN3786-S.SNP.8:8287653 chr08:008287653 0 W/8287653-8287653 FN3786-S SNP G -> A AC=2;AN=190;BQB=0.982535;DP=2755;DP4=1217,1401,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.68026e-11;MQSB=0.755039;RPB=0.959114;SGB=85.5263;VDB=0.0138052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.8:8290374 chr08:008290374 0 W/8290374-8290374 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.99991;DP=4762;DP4=2330,2201,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82257e-13;MQSB=0.942005;RPB=0.849238;SGB=91.1059;VDB=0.927187;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G35|69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|1|1) FN2205-S.SNP.8:8290889 chr08:008290889 0 W/8290889-8290889 FN2205-S SNP T -> A AC=1;AN=190;BQB=0.56567;DP=4924;DP4=2529,2059,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.2571e-12;MQSB=0.946875;RPB=0.460782;SGB=49.1985;VDB=0.293078;EFF=INTRON(MODIFIER||||69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|1|1) FN3420-S.SNP.8:8300429 chr08:008300429 0 W/8300429-8300429 FN3420-S SNP T -> A AC=1;AN=184;BQB=0.998836;DP=3328;DP4=1618,1549,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000243671;MQSB=0.973309;RPB=0.739672;SGB=30.6558;VDB=0.394165;EFF=INTRON(MODIFIER||||69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|2|1) FN2153-S.SNP.8:8300715 chr08:008300715 0 W/8300715-8300715 FN2153-S SNP T -> C AC=1;AN=168;BQB=0.798838;DP=4479;DP4=1961,2481,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.14883e-07;MQSB=0.99589;RPB=0.901863;SGB=29.4772;VDB=0.766257;EFF=INTRON(MODIFIER||||69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|2|1) FN-223.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN-223 Single Base Substitution C-A INTRON HOMO SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-306.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN-306 Single Base Substitution C-A INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-85.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN-85 Single Base Substitution C-A INTRON HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1075-S.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN1075-S Single Base Substitution C-A INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3577-S.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN3577-S SNP C -> A AC=2;AN=188;BQB=0.857636;DP=2946;DP4=1523,1289,26,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.79197e-20;MQSB=0.115976;RPB=0.975371;SGB=166.4;VDB=0.995732;EFF=INTRON(MODIFIER||||69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|2|1) FN3899-S.SNP.8:8303236 chr08:008303236 0 W/8303236-8303236 FN3899-S SNP C -> A AC=2;AN=158;BQB=0.996114;DP=2540;DP4=1271,1156,10,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000393701;MQB=8.26078e-13;MQSB=0.208723;RPB=0.954564;SGB=108.239;VDB=0.623966;EFF=INTRON(MODIFIER||||69|LOC_Os08g13880|protein_coding|CODING|LOC_Os08g13880.1|2|1) FN-259.SNP.8:8314448 chr08:008314448 0 W/8314448-8314448 FN-259 Single Base Substitution A-C INTERGENIC HOMO SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN1118-S.SNP.8:8314448 chr08:008314448 0 W/8314448-8314448 FN1118-S Single Base Substitution A-C INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1124-S.SNP.8:8314448 chr08:008314448 0 W/8314448-8314448 FN1124-S Single Base Substitution A-C INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN318-S.SNP.8:8314448 chr08:008314448 0 W/8314448-8314448 FN318-S Single Base Substitution A-C INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN-377.SNP.8:8314819 chr08:008314819 0 W/8314819-8314819 FN-377 Single Base Substitution C-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1576-S.SNP.8:8316628 chr08:008316628 0 W/8316628-8316628 FN1576-S Single Base Substitution C-T INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1576-S.SNP.8:8316633 chr08:008316633 0 W/8316633-8316633 FN1576-S Single Base Substitution C-T INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2797-S.SNP.8:8320529 chr08:008320529 0 W/8320529-8320529 FN2797-S SNP A -> G AC=1;AN=198;BQB=0.898005;DP=4543;DP4=2089,2187,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.53462e-14;MQSB=0.643074;RPB=0.978591;SGB=90.4807;VDB=0.55728;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.8:8324176 chr08:008324176 0 W/8324176-8324176 FN503-S Single Base Substitution T-C INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN887-S.SNP.8:8324541 chr08:008324541 0 W/8324541-8324541 FN887-S Single Base Substitution T-C INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2474.SNP.8:8332049 chr08:008332049 0 W/8332049-8332049 FN2474 SNP T -> A AC=1;AN=200;BQB=0.789781;DP=5065;DP4=2398,2250,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68793e-15;MQSB=0.64621;RPB=0.946292;SGB=-39.6587;VDB=0.311553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.8:8337484 chr08:008337484 0 W/8337484-8337484 FN2130-S SNP T -> C AC=1;AN=168;BQB=0.00265722;DP=8461;DP4=4291,4107,16,17;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=8.18018e-08;MQSB=0.0821492;RPB=0.411671;SGB=-270.884;VDB=0.886089;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.8:8339991 chr08:008339991 0 W/8339991-8339991 FN885-S Single Base Substitution A-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN3429-S.SNP.8:8347781 chr08:008347781 0 W/8347781-8347781 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.947457;DP=3548;DP4=1842,1620,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.73664e-07;MQSB=0.920429;RPB=0.381984;SGB=39.699;VDB=0.142559;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.8:8357033 chr08:008357033 0 W/8357033-8357033 FN-384 Single Base Substitution C-T INTRON HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN-166.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN-166 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1188-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN1188-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1348-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN1348-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1630-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN1630-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2261-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN2261-S SNP G -> A AC=2;AN=190;BQB=0.576296;DP=4616;DP4=2123,2150,39,49;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000216638;MQB=1.89175e-43;MQSB=0.185511;RPB=0.700729;SGB=341.101;VDB=0.352114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN2491.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN2491 SNP G -> A AC=1;AN=200;BQB=0.478389;DP=4335;DP4=1985,2115,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.40366e-10;MQSB=0.748695;RPB=0.725201;SGB=47.4799;VDB=0.192221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN2749-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.462711;DP=4753;DP4=2152,2336,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.06358e-12;MQSB=0.985005;RPB=0.948794;SGB=37.3004;VDB=0.220177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN3390-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN3390-S SNP G -> A AC=2;AN=184;BQB=0.932372;DP=3387;DP4=1540,1717,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.53525e-17;MQSB=0.981577;RPB=0.566876;SGB=125.613;VDB=0.0640017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN3780-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN3780-S SNP G -> A AC=1;AN=190;BQB=0.900326;DP=2980;DP4=1352,1522,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.35929e-08;MQSB=0.999367;RPB=0.138318;SGB=49.0954;VDB=0.18368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN4078-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN4078-S SNP G -> A AC=2;AN=182;BQB=0.857504;DP=3061;DP4=1418,1561,11,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.51599e-13;MQSB=0.99873;RPB=0.504827;SGB=84.7091;VDB=0.363747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN4137-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN4137-S SNP G -> A AC=1;AN=170;BQB=0.983348;DP=2551;DP4=1105,1372,12,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.67937e-12;MQSB=0.970057;RPB=0.803703;SGB=83.4133;VDB=0.777975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A181T|411|LOC_Os08g13950|protein_coding|CODING|LOC_Os08g13950.1|5|1) FN425-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN425-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN782-S.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 FN782-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. W42-1-3S-1.SNP.8:8359394 chr08:008359394 0 W/8359394-8359394 W42-1-3S-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3057-S.SNP.8:8361678 chr08:008361678 0 W/8361678-8361678 FN3057-S SNP C -> A AC=1;AN=184;BQB=0.992083;DP=3114;DP4=1418,1583,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0131663;MQB=0.587466;MQSB=0.888593;RPB=0.964686;SGB=28.7043;VDB=0.0030797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.8:8361866 chr08:008361866 0 W/8361866-8361866 FN3401-S SNP G -> T AC=1;AN=184;BQB=0.848843;DP=2800;DP4=1507,1179,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33485e-10;MQSB=0.929798;RPB=0.697269;SGB=75.8731;VDB=0.745488;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.8:8362249 chr08:008362249 0 W/8362249-8362249 FN833-S Single Base Substitution T-C INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN3765-S.SNP.8:8365951 chr08:008365951 0 W/8365951-8365951 FN3765-S SNP T -> A AC=1;AN=190;BQB=0.956156;DP=2411;DP4=1283,1029,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1998e-05;MQSB=0.927221;RPB=0.173601;SGB=39.9877;VDB=0.443221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.8:8367975 chr08:008367975 0 W/8367975-8367975 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.866846;DP=3045;DP4=1627,1308,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000656814;MQB=3.08354e-06;MQSB=0.000401321;RPB=0.983648;SGB=23.6597;VDB=0.749699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S1064F|1177|LOC_Os08g13960|protein_coding|CODING|LOC_Os08g13960.1|10|1) FN3925-S.SNP.8:8386566 chr08:008386566 0 W/8386566-8386566 FN3925-S SNP G -> A AC=1;AN=158;BQB=0.739432;DP=2388;DP4=1062,1240,4,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36541e-10;MQSB=0.991017;RPB=0.954631;SGB=64.5449;VDB=0.26298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.8:8386567 chr08:008386567 0 W/8386567-8386567 FN3925-S SNP T -> A AC=1;AN=158;BQB=0.914416;DP=2396;DP4=1043,1246,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.92274e-11;MQSB=0.980756;RPB=0.998364;SGB=47.5512;VDB=0.0579806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.8:8387188 chr08:008387188 0 W/8387188-8387188 FN2108-S SNP C -> T AC=1;AN=168;BQB=0.918909;DP=2236;DP4=1049,1139,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00357782;MQB=0.426519;MQSB=5.15184e-26;RPB=0.475809;SGB=24.4556;VDB=0.262342;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.8:8396479 chr08:008396479 0 W/8396479-8396479 FN499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g14000 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN499-S.SNP.8:8396480 chr08:008396480 0 W/8396480-8396480 FN499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g14000 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1501-S.SNP.8:8398736 chr08:008398736 0 W/8398736-8398736 FN1501-S Single Base Substitution C-G INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-290.SNP.8:8400718 chr08:008400718 0 W/8400718-8400718 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3427-S.SNP.8:8401686 chr08:008401686 0 W/8401686-8401686 FN3427-S SNP T -> A AC=1;AN=184;BQB=0.828011;DP=5100;DP4=2072,2757,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00960784;MQB=0.000282557;MQSB=4.42794e-10;RPB=0.854294;SGB=62.3078;VDB=0.179528;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.8:8401764 chr08:008401764 0 W/8401764-8401764 FN1156-XA21 Single Base Substitution C-T INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2196-S.SNP.8:8402517 chr08:008402517 0 W/8402517-8402517 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.602215;DP=5592;DP4=2608,2589,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0434549;MQB=1.31591e-05;MQSB=0.392418;RPB=0.622909;SGB=126.511;VDB=0.466663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.8:8403357 chr08:008403357 0 W/8403357-8403357 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.68781;DP=6124;DP4=3308,2294,19,8;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.400229;MQB=0.000336084;MQSB=0;RPB=0.0347774;SGB=-71.8882;VDB=0.430206;EFF=INTRON(MODIFIER||||154|LOC_Os08g14010|protein_coding|CODING|LOC_Os08g14010.1|1|1) FN484-S.SNP.8:8407825 chr08:008407825 0 W/8407825-8407825 FN484-S Single Base Substitution T-C INTRON HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3824-S.SNP.8:8409283 chr08:008409283 0 W/8409283-8409283 FN3824-S SNP T -> A AC=1;AN=190;BQB=0.985245;DP=2547;DP4=1162,1274,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000153928;MQSB=0.629936;RPB=0.479105;SGB=21.8853;VDB=0.727644;EFF=INTRON(MODIFIER||||279|LOC_Os08g14020|protein_coding|CODING|LOC_Os08g14020.1|6|1) FN1035-S.SNP.8:8410838 chr08:008410838 0 W/8410838-8410838 FN1035-S Single Base Substitution A-T INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN_807-3-1.SNP.8:8418207 chr08:008418207 0 W/8418207-8418207 FN_807-3-1 Single Base Substitution G-A HET LOC_Os08g14050 expressed protein SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2696-S.SNP.8:8418751 chr08:008418751 0 W/8418751-8418751 FN2696-S SNP G -> T AC=1;AN=200;BQB=0.301547;DP=4423;DP4=2403,1708,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14607e-11;MQSB=1.5736e-06;RPB=0.404718;SGB=17.5158;VDB=0.067993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.8:8420031 chr08:008420031 0 W/8420031-8420031 FN2358 SNP T -> G AC=2;AN=192;BQB=0.270976;DP=5044;DP4=2228,2281,15,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.76722e-13;MQSB=0.508237;RPB=0.920372;SGB=26.127;VDB=0.993517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.8:8421701 chr08:008421701 0 W/8421701-8421701 FN2474 SNP T -> C AC=1;AN=200;BQB=0.190901;DP=3332;DP4=1557,1164,15,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00030012;MQB=1.05418e-14;MQSB=0.128059;RPB=0.781931;SGB=87.1368;VDB=0.541956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.8:8422184 chr08:008422184 0 W/8422184-8422184 FN3039-S SNP A -> G AC=1;AN=184;BQB=0.884666;DP=3250;DP4=2051,1044,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.16122e-08;MQSB=0.50967;RPB=0.228563;SGB=57.786;VDB=0.672102;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.8:8432923 chr08:008432923 0 W/8432923-8432923 FN4224-S SNP T -> C AC=1;AN=170;BQB=0.55831;DP=2119;DP4=1165,866,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.52398e-07;MQSB=0.996365;RPB=0.359846;SGB=70.0854;VDB=0.0456747;EFF=INTRON(MODIFIER||||176|LOC_Os08g14090|protein_coding|CODING|LOC_Os08g14090.1|4|1) FN3571-S.SNP.8:8440420 chr08:008440420 0 W/8440420-8440420 FN3571-S SNP C -> G AC=2;AN=188;BQB=0.962122;DP=2852;DP4=1324,1387,11,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.46052e-16;MQSB=0.575639;RPB=0.822734;SGB=96.2203;VDB=0.0479313;EFF=INTRON(MODIFIER||||263|LOC_Os08g14109|protein_coding|CODING|LOC_Os08g14109.1|2|1) FN1131-S.SNP.8:8440863 chr08:008440863 0 W/8440863-8440863 FN1131-S Single Base Substitution G-C INTRON HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN2356.SNP.8:8443116 chr08:008443116 0 W/8443116-8443116 FN2356 SNP G -> A AC=2;AN=192;BQB=0.022278;DP=4924;DP4=2569,1997,29,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.17704e-30;MQSB=0.953127;RPB=0.998162;SGB=185.918;VDB=0.874077;EFF=INTRON(MODIFIER||||263|LOC_Os08g14109|protein_coding|CODING|LOC_Os08g14109.1|2|1) FN1727-S.SNP.8:8444586 chr08:008444586 0 W/8444586-8444586 FN1727-S SNP C -> T AC=2;AN=188;BQB=0.999463;DP=3850;DP4=1721,2063,25,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.41779e-28;MQSB=0.982979;RPB=0.697417;SGB=4.55885;VDB=0.681802;EFF=INTRON(MODIFIER||||263|LOC_Os08g14109|protein_coding|CODING|LOC_Os08g14109.1|6|1) FN1373-S.SNP.8:8449517 chr08:008449517 0 W/8449517-8449517 FN1373-S Single Base Substitution C-T INTRON Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN-14.SNP.8:8452685 chr08:008452685 0 W/8452685-8452685 FN-14 Single Base Substitution A-T INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-14.SNP.8:8452836 chr08:008452836 0 W/8452836-8452836 FN-14 Single Base Substitution C-G INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1060-S.SNP.8:8455188 chr08:008455188 0 W/8455188-8455188 FN1060-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN-285.SNP.8:8459255 chr08:008459255 0 W/8459255-8459255 FN-285 Single Base Substitution C-T INTERGENIC HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3372-S.SNP.8:8460526 chr08:008460526 0 W/8460526-8460526 FN3372-S SNP C -> T AC=1;AN=184;BQB=0.862323;DP=3059;DP4=1457,1530,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.438705;MQB=0.317059;MQSB=0;RPB=0.829356;SGB=30.8405;VDB=0.627676;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1084*|1268|LOC_Os08g14170|protein_coding|CODING|LOC_Os08g14170.1|1|1) FN2462.SNP.8:8464265 chr08:008464265 0 W/8464265-8464265 FN2462 SNP G -> A AC=1;AN=200;BQB=0.99989;DP=3682;DP4=1393,2045,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18369e-08;MQSB=0.859972;RPB=0.998372;SGB=77.2904;VDB=0.521408;EFF=INTERGENIC(MODIFIER||||||||||1) FN-374.SNP.8:8470353 chr08:008470353 0 W/8470353-8470353 FN-374 Single Base Substitution C-A INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN2452.SNP.8:8472142 chr08:008472142 0 W/8472142-8472142 FN2452 SNP A -> T AC=2;AN=200;BQB=0.177738;DP=4292;DP4=1893,1821,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.1551e-19;MQSB=0.90083;RPB=0.99874;SGB=43.1985;VDB=0.974658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.8:8475808 chr08:008475808 0 W/8475808-8475808 FN2494 SNP T -> C AC=1;AN=200;BQB=0.762049;DP=4399;DP4=1994,2116,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.31744e-08;MQSB=0.634917;RPB=0.988242;SGB=77.2904;VDB=0.994699;EFF=INTERGENIC(MODIFIER||||||||||1) W591-4-1.SNP.8:8481884 chr08:008481884 0 W/8481884-8481884 W591-4-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN819-S.SNP.8:8483574 chr08:008483574 0 W/8483574-8483574 FN819-S Single Base Substitution T-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3627-S.SNP.8:8493362 chr08:008493362 0 W/8493362-8493362 FN3627-S SNP G -> C AC=1;AN=190;BQB=0.624372;DP=2921;DP4=1257,1593,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000129636;MQSB=0.888323;RPB=0.852711;SGB=39.9877;VDB=0.917603;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.8:8494713 chr08:008494713 0 W/8494713-8494713 FN964-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g14210 glycosyl hydrolases family 16, putative, expressed SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1657-S.SNP.8:8495175 chr08:008495175 0 W/8495175-8495175 FN1657-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2725-S.SNP.8:8503200 chr08:008503200 0 W/8503200-8503200 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.990827;DP=5104;DP4=2558,2343,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29451e-08;MQSB=0.947928;RPB=0.999698;SGB=36.6644;VDB=0.565572;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.8:8511492 chr08:008511492 0 W/8511492-8511492 FN833-S Single Base Substitution G-A INTRON HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1413-S.SNP.8:8513465 chr08:008513465 0 W/8513465-8513465 FN1413-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g14230 villin, putative, expressed SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN_809-6-1.SNP.8:8514488 chr08:008514488 0 W/8514488-8514488 FN_809-6-1 Single Base Substitution T-C Homo LOC_Os08g14230 villin, putative, expressed SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN-301.SNP.8:8516587 chr08:008516587 0 W/8516587-8516587 FN-301 Single Base Substitution G-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3856-S.SNP.8:8519497 chr08:008519497 0 W/8519497-8519497 FN3856-S SNP A -> C AC=1;AN=158;BQB=0.816846;DP=2110;DP4=1031,995,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.54137e-07;MQSB=0.997839;RPB=0.9871;SGB=42.6978;VDB=0.276116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.8:8526450 chr08:008526450 0 W/8526450-8526450 FN2165-S SNP T -> A AC=2;AN=168;BQB=0.189834;DP=4057;DP4=2038,1575,29,14;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.30779e-08;MQSB=0.875475;RPB=0.899013;SGB=-146.877;VDB=0.1805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.8:8531540 chr08:008531540 0 W/8531540-8531540 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.996444;DP=4810;DP4=2400,2148,19,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.31691e-21;MQSB=0.842384;RPB=0.82294;SGB=71.1676;VDB=0.755448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.8:8551709 chr08:008551709 0 W/8551709-8551709 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.384359;DP=4572;DP4=2273,2023,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000437445;MQB=5.95584e-06;MQSB=0.922786;RPB=0.971865;SGB=19.0642;VDB=0.445805;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A71|185|LOC_Os08g14260|protein_coding|CODING|LOC_Os08g14260.1|1|1) FN-200.SNP.8:8552832 chr08:008552832 0 W/8552832-8552832 FN-200 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3444-S.SNP.8:8556421 chr08:008556421 0 W/8556421-8556421 FN3444-S SNP T -> A AC=1;AN=184;BQB=0.971706;DP=3246;DP4=1584,1592,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.101047;MQB=0.926107;MQSB=4.90726e-12;RPB=0.925077;SGB=32.2261;VDB=0.00368066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.8:8557158 chr08:008557158 0 W/8557158-8557158 FN1423-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g14280 retrotransposon protein, putative, unclassified, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1448-S.SNP.8:8558799 chr08:008558799 0 W/8558799-8558799 FN1448-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-69.SNP.8:8561451 chr08:008561451 0 W/8561451-8561451 FN-69 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1345-S.SNP.8:8563740 chr08:008563740 0 W/8563740-8563740 FN1345-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3557-S.SNP.8:8565592 chr08:008565592 0 W/8565592-8565592 FN3557-S SNP T -> C AC=1;AN=188;BQB=0.505415;DP=3135;DP4=1130,1821,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.03659e-14;MQSB=0.998684;RPB=0.262288;SGB=94.4119;VDB=0.0528363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.8:8568234 chr08:008568234 0 W/8568234-8568234 FN3366-S SNP T -> A AC=2;AN=184;BQB=0.984693;DP=2900;DP4=1575,1213,15,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.54616e-18;MQSB=0.964505;RPB=0.330251;SGB=106.184;VDB=0.23919;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.8:8568528 chr08:008568528 0 W/8568528-8568528 FN185-2_3_4 SNP A -> C AC=1;AN=188;BQB=0.214791;DP=3816;DP4=1900,1874,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.01369e-07;MQSB=0.950759;RPB=0.782079;SGB=-38.7347;VDB=0.917137;EFF=INTERGENIC(MODIFIER||||||||||1) FN-67.SNP.8:8570324 chr08:008570324 0 W/8570324-8570324 FN-67 Single Base Substitution G-A INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN4101-S.SNP.8:8577915 chr08:008577915 0 W/8577915-8577915 FN4101-S SNP A -> T AC=1;AN=182;BQB=0.957101;DP=2903;DP4=1207,1633,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.69853e-08;MQSB=0.969194;RPB=0.823709;SGB=53.1331;VDB=0.0614522;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.8:8582809 chr08:008582809 0 W/8582809-8582809 FN-368 Single Base Substitution C-T INTRON HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN1216-S.SNP.8:8588476 chr08:008588476 0 W/8588476-8588476 FN1216-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN3666-S.SNP.8:8597328 chr08:008597328 0 W/8597328-8597328 FN3666-S SNP T -> C AC=1;AN=190;BQB=1;DP=2621;DP4=1399,1046,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.99758e-06;MQSB=0.0982979;RPB=0.976771;SGB=15.9981;VDB=0.202124;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.8:8611292 chr08:008611292 0 W/8611292-8611292 FN544-S Single Base Substitution T-C INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN1024-S.SNP.8:8612390 chr08:008612390 0 W/8612390-8612390 FN1024-S Single Base Substitution T-A INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-173.SNP.8:8622737 chr08:008622737 0 W/8622737-8622737 FN-173 Single Base Substitution A-G INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2200-S.SNP.8:8629081 chr08:008629081 0 W/8629081-8629081 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.976947;DP=4748;DP4=2136,2391,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10128e-11;MQSB=0.959737;RPB=0.942683;SGB=57.4238;VDB=0.0738137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.8:8631580 chr08:008631580 0 W/8631580-8631580 FN2620-S SNP A -> G AC=1;AN=198;BQB=0.0441409;DP=3987;DP4=1869,1921,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.85883e-12;MQSB=0.951503;RPB=0.229896;SGB=81.7147;VDB=0.158694;EFF=INTRON(MODIFIER||||390|LOC_Os08g14390|protein_coding|CODING|LOC_Os08g14390.1|1|1) FN3455-S.SNP.8:8636094 chr08:008636094 0 W/8636094-8636094 FN3455-S SNP A -> G AC=2;AN=184;BQB=0.741615;DP=3291;DP4=1648,1474,22,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000303859;MQB=1.15125e-16;MQSB=0.0696147;RPB=0.578085;SGB=109.705;VDB=0.994251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S289G|390|LOC_Os08g14390|protein_coding|CODING|LOC_Os08g14390.1|5|1) FN2709-S.SNP.8:8638721 chr08:008638721 0 W/8638721-8638721 FN2709-S SNP A -> G AC=1;AN=200;BQB=0.965658;DP=4666;DP4=2399,1978,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06131e-08;MQSB=0.82706;RPB=0.959108;SGB=40.2696;VDB=0.198732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1730-S.SNP.8:8639112 chr08:008639112 0 W/8639112-8639112 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.11045;DP=3713;DP4=1688,1974,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.96486e-08;MQSB=0.997567;RPB=0.947098;SGB=-88.8972;VDB=0.992848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.8:8639570 chr08:008639570 0 W/8639570-8639570 FN2322 SNP G -> T AC=1;AN=192;BQB=0.489466;DP=4647;DP4=2673,1701,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215193;MQB=2.0032e-12;MQSB=0.664842;RPB=0.453213;SGB=15.1765;VDB=0.477854;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y277*|284|LOC_Os08g14400|protein_coding|CODING|LOC_Os08g14400.1|2|1) FN2472.SNP.8:8642626 chr08:008642626 0 W/8642626-8642626 FN2472 SNP T -> C AC=1;AN=200;BQB=0.939909;DP=4799;DP4=2070,2397,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44982e-15;MQSB=0.825643;RPB=0.743811;SGB=20.7261;VDB=0.183595;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.8:8655409 chr08:008655409 0 W/8655409-8655409 FN837-S Single Base Substitution G-T INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN-310.SNP.8:8661702 chr08:008661702 0 W/8661702-8661702 FN-310 Single Base Substitution A-G INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN4279-S.SNP.8:8666723 chr08:008666723 0 W/8666723-8666723 FN4279-S SNP T -> C AC=2;AN=170;BQB=0.399009;DP=2113;DP4=1246,781,17,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.02846e-12;MQSB=0.993421;RPB=0.663363;SGB=56.5237;VDB=0.452888;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.8:8667814 chr08:008667814 0 W/8667814-8667814 FN3666-S SNP G -> C AC=1;AN=190;BQB=0.720437;DP=2772;DP4=1300,1390,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.96847e-11;MQSB=0.995936;RPB=0.907921;SGB=90.0802;VDB=0.579512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.8:8668664 chr08:008668664 0 W/8668664-8668664 FN3893-S SNP G -> T AC=1;AN=158;BQB=0.91112;DP=2145;DP4=943,1126,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.23006e-07;MQSB=0.977321;RPB=0.556376;SGB=47.0672;VDB=0.176605;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.8:8670372 chr08:008670372 0 W/8670372-8670372 FN4098-S SNP T -> C AC=2;AN=182;BQB=0.97377;DP=2777;DP4=1391,1278,12,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.04164e-18;MQSB=0.891406;RPB=0.99913;SGB=134.329;VDB=0.730572;EFF=INTRON(MODIFIER||||193|LOC_Os08g14440|protein_coding|CODING|LOC_Os08g14440.3|6|1),INTRON(MODIFIER||||284|LOC_Os08g14440|protein_coding|CODING|LOC_Os08g14440.1|6|1),INTRON(MODIFIER||||283|LOC_Os08g14440|protein_coding|CODING|LOC_Os08g14440.2|6|1) FN2106-S.SNP.8:8677058 chr08:008677058 0 W/8677058-8677058 FN2106-S SNP C -> T AC=1;AN=168;BQB=0.444297;DP=3345;DP4=1536,1738,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07067e-07;MQSB=0.97572;RPB=0.198092;SGB=-66.4989;VDB=0.34025;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.8:8677856 chr08:008677856 0 W/8677856-8677856 FN590-S Single Base Substitution C-A INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN3854-S.SNP.8:8678647 chr08:008678647 0 W/8678647-8678647 FN3854-S SNP T -> G AC=1;AN=158;BQB=0.875496;DP=2475;DP4=1127,1234,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.44114e-05;MQSB=0.998078;RPB=0.515171;SGB=29.5899;VDB=0.414968;EFF=INTRON(MODIFIER||||572|LOC_Os08g14450|protein_coding|CODING|LOC_Os08g14450.1|2|1) FN2174-S.SNP.8:8678660 chr08:008678660 0 W/8678660-8678660 FN2174-S SNP G -> A AC=1;AN=168;BQB=0.0122787;DP=3536;DP4=2072,1398,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.90354e-09;MQSB=0.945716;RPB=0.999786;SGB=-211.183;VDB=0.530353;EFF=INTRON(MODIFIER||||572|LOC_Os08g14450|protein_coding|CODING|LOC_Os08g14450.1|2|1) FN1739-S.SNP.8:8681189 chr08:008681189 0 W/8681189-8681189 FN1739-S SNP C -> T AC=1;AN=188;BQB=0.871369;DP=3381;DP4=2025,1330,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.5688e-07;MQSB=0.944876;RPB=0.939804;SGB=15.903;VDB=0.850567;EFF=UTR_3_PRIME(MODIFIER||745||398|LOC_Os08g14460|protein_coding|CODING|LOC_Os08g14460.2|15|1),UTR_3_PRIME(MODIFIER||745||427|LOC_Os08g14460|protein_coding|CODING|LOC_Os08g14460.1|14|1),UTR_3_PRIME(MODIFIER||92||572|LOC_Os08g14450|protein_coding|CODING|LOC_Os08g14450.1|9|1) FN-234.SNP.8:8683162 chr08:008683162 0 W/8683162-8683162 FN-234 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3532-S.SNP.8:8686817 chr08:008686817 0 W/8686817-8686817 FN3532-S SNP C -> T AC=1;AN=188;BQB=0.766092;DP=3036;DP4=1479,1423,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10396e-13;MQSB=0.810215;RPB=0.538646;SGB=85.5904;VDB=0.808318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.8:8686820 chr08:008686820 0 W/8686820-8686820 FN3532-S SNP T -> G AC=1;AN=188;BQB=0.999189;DP=3015;DP4=1385,1420,14,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.66765e-16;MQSB=0.830795;RPB=0.941872;SGB=24.0577;VDB=0.669161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.8:8696087 chr08:008696087 0 W/8696087-8696087 FN3341-S SNP G -> A AC=1;AN=184;BQB=0.900627;DP=4525;DP4=1973,2417,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.0824309;MQB=0.999701;MQSB=1.29293e-05;RPB=0.866406;SGB=32.2261;VDB=0.538108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.8:8716400 chr08:008716400 0 W/8716400-8716400 FN2235-S SNP T -> C AC=1;AN=190;BQB=0.976035;DP=4988;DP4=2301,2345,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.95244e-19;MQSB=0.488286;RPB=0.921754;SGB=30.527;VDB=0.231223;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.8:8727974 chr08:008727974 0 W/8727974-8727974 FN1477-S Single Base Substitution C-T INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN808-S.SNP.8:8744254 chr08:008744254 0 W/8744254-8744254 FN808-S Single Base Substitution C-T INTRON HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN808-S.SNP.8:8744255 chr08:008744255 0 W/8744255-8744255 FN808-S Single Base Substitution C-T INTRON HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN2620-S.SNP.8:8746794 chr08:008746794 0 W/8746794-8746794 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.546047;DP=2844;DP4=1136,1335,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00316456;MQB=2.40504e-05;MQSB=0.00375135;RPB=0.607921;SGB=26.7492;VDB=0.706638;EFF=INTRON(MODIFIER||||1566|LOC_Os08g14550|protein_coding|CODING|LOC_Os08g14550.1|1|1) FN3869-S.SNP.8:8748252 chr08:008748252 0 W/8748252-8748252 FN3869-S SNP A -> C AC=1;AN=158;BQB=0.900032;DP=2932;DP4=1228,1589,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.188267;MQB=0.0646049;MQSB=2.27884e-26;RPB=0.295986;SGB=27.3346;VDB=0.54266;EFF=INTRON(MODIFIER||||1566|LOC_Os08g14550|protein_coding|CODING|LOC_Os08g14550.1|2|1) FN924-S.SNP.8:8752881 chr08:008752881 0 W/8752881-8752881 FN924-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g14560 retrotransposon protein, putative, unclassified, expressed SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2782-S.SNP.8:8753603 chr08:008753603 0 W/8753603-8753603 FN2782-S SNP G -> A AC=1;AN=186;BQB=0.744391;DP=3451;DP4=1574,1639,10,11;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.000289771;MQB=2.99534e-10;MQSB=0.343661;RPB=0.85193;SGB=90.9049;VDB=0.128739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A749V|1030|LOC_Os08g14560|protein_coding|CODING|LOC_Os08g14560.1|2|1) FN1153-S.SNP.8:8754422 chr08:008754422 0 W/8754422-8754422 FN1153-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g14560 retrotransposon protein, putative, unclassified, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN415-S.SNP.8:8754513 chr08:008754513 0 W/8754513-8754513 FN415-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g14560 retrotransposon protein, putative, unclassified, expressed SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1216-S.SNP.8:8754953 chr08:008754953 0 W/8754953-8754953 FN1216-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g14560 retrotransposon protein, putative, unclassified, expressed SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1476-S.SNP.8:8756894 chr08:008756894 0 W/8756894-8756894 FN1476-S Single Base Substitution C-T INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1476-S.SNP.8:8756903 chr08:008756903 0 W/8756903-8756903 FN1476-S Single Base Substitution T-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-286.SNP.8:8758122 chr08:008758122 0 W/8758122-8758122 FN-286 Single Base Substitution G-T INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3772-S.SNP.8:8759792 chr08:008759792 0 W/8759792-8759792 FN3772-S SNP T -> C AC=1;AN=190;BQB=0.00112718;DP=1762;DP4=633,1020,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00170261;MQB=0.000320385;MQSB=2.97919e-13;RPB=0.477762;SGB=32.5467;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.8:8770964 chr08:008770964 0 W/8770964-8770964 FN3656-S SNP A -> G AC=1;AN=190;BQB=0.937588;DP=3327;DP4=1784,1411,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.71212e-10;MQSB=0.891323;RPB=0.406918;SGB=76.4186;VDB=0.568203;EFF=INTRON(MODIFIER||||240|LOC_Os08g14580|protein_coding|CODING|LOC_Os08g14580.1|2|1) FN3693-S.SNP.8:8771848 chr08:008771848 0 W/8771848-8771848 FN3693-S SNP C -> T AC=2;AN=190;BQB=0.977395;DP=3113;DP4=1556,1382,29,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.9422e-27;MQSB=0.967905;RPB=0.729654;SGB=202.956;VDB=0.645434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.8:8772992 chr08:008772992 0 W/8772992-8772992 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.761974;DP=5209;DP4=2616,2352,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11011e-11;MQSB=0.978336;RPB=0.063151;SGB=54.6902;VDB=0.246541;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.8:8774924 chr08:008774924 0 W/8774924-8774924 FN1323-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1554-S.SNP.8:8774924 chr08:008774924 0 W/8774924-8774924 FN1554-S Single Base Substitution G-T INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1722-S.SNP.8:8774924 chr08:008774924 0 W/8774924-8774924 FN1722-S SNP G -> T AC=1;AN=188;BQB=0.396849;DP=1481;DP4=873,567,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000152809;MQSB=0.999993;RPB=0.40424;SGB=25.3545;VDB=0.806618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.8:8775559 chr08:008775559 0 W/8775559-8775559 FN1163-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3664-S.SNP.8:8786113 chr08:008786113 0 W/8786113-8786113 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.99435;DP=2953;DP4=1338,1404,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45128e-06;MQSB=0.342247;RPB=0.915946;SGB=39.9877;VDB=0.667402;EFF=INTRON(MODIFIER||||1148|LOC_Os08g14610|protein_coding|CODING|LOC_Os08g14610.1|8|1) FN625-S.SNP.8:8797241 chr08:008797241 0 W/8797241-8797241 FN625-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-152.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN-152 Single Base Substitution C-T INTERGENIC HOMO SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN-243.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN-243 Single Base Substitution C-T INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-330.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN-330 Single Base Substitution C-T INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN-69.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN-69 Single Base Substitution C-T INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1104-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN1104-S Single Base Substitution C-T INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1559-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN1559-S Single Base Substitution C-T INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1689-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN1689-S SNP C -> T AC=2;AN=188;BQB=0.00655438;DP=3616;DP4=1777,1790,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.37564e-11;MQSB=0.924289;RPB=0.0429551;SGB=-206.824;VDB=0.0669396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN2254-S SNP C -> T AC=2;AN=190;BQB=0.956354;DP=4765;DP4=2294,2096,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.81263e-15;MQSB=0.880993;RPB=0.636432;SGB=121.957;VDB=0.337076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN2498 SNP C -> T AC=2;AN=200;BQB=0.276313;DP=4862;DP4=2280,2204,9,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.83661e-19;MQSB=0.685824;RPB=0.999884;SGB=63.3521;VDB=0.63887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.977227;DP=2948;DP4=1461,1375,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.75852e-10;MQSB=0.869917;RPB=0.709559;SGB=43.2083;VDB=0.0472706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN3965-S SNP C -> T AC=1;AN=168;BQB=0.980552;DP=2541;DP4=1249,1180,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74372e-09;MQSB=0.87325;RPB=0.453805;SGB=61.0344;VDB=0.60546;EFF=INTERGENIC(MODIFIER||||||||||1) FN570-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN570-S Single Base Substitution C-T INTERGENIC HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN724-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN724-S Single Base Substitution C-T INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN798-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN798-S Single Base Substitution C-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN815-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN815-S Single Base Substitution C-T INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN873-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN873-S Single Base Substitution C-T INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN961-S.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN961-S Single Base Substitution C-T INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN_831-4-1.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 FN_831-4-1 Single Base Substitution C-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. W706-3-1.SNP.8:8807498 chr08:008807498 0 W/8807498-8807498 W706-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN1684-S.SNP.8:8809525 chr08:008809525 0 W/8809525-8809525 FN1684-S SNP G -> C AC=2;AN=188;BQB=0.863636;DP=2111;DP4=1483,592,16,7;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0156324;MQB=3.5633e-07;MQSB=1.375e-06;RPB=0.843958;SGB=71.4172;VDB=0.970817;EFF=INTRON(MODIFIER||||94|LOC_Os08g14650|protein_coding|CODING|LOC_Os08g14650.1|1|1) FN1266-S.SNP.8:8810960 chr08:008810960 0 W/8810960-8810960 FN1266-S Single Base Substitution A-T INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN1153-S.SNP.8:8827404 chr08:008827404 0 W/8827404-8827404 FN1153-S Single Base Substitution C-T INTRON HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN483-S.SNP.8:8832103 chr08:008832103 0 W/8832103-8832103 FN483-S Single Base Substitution G-T INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3528-S.SNP.8:8832160 chr08:008832160 0 W/8832160-8832160 FN3528-S SNP T -> A AC=1;AN=188;BQB=0.400203;DP=3683;DP4=1279,2062,15,24;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00380125;MQB=8.25639e-05;MQSB=0.307484;RPB=0.633543;SGB=-2.50398;VDB=0.32511;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.8:8834795 chr08:008834795 0 W/8834795-8834795 W426-1-1 Single Base Substitution C-T INTRON HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN629-S.SNP.8:8838508 chr08:008838508 0 W/8838508-8838508 FN629-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g14700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3536-S.SNP.8:8847429 chr08:008847429 0 W/8847429-8847429 FN3536-S SNP T -> A AC=1;AN=188;BQB=0.995465;DP=2692;DP4=1359,1270,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16669e-06;MQSB=0.943808;RPB=0.777831;SGB=21.8113;VDB=0.194649;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.8:8847429 chr08:008847429 0 W/8847429-8847429 FN940-S Single Base Substitution T-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3806-S.SNP.8:8862514 chr08:008862514 0 W/8862514-8862514 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.999919;DP=2734;DP4=1404,1254,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.48074e-10;MQSB=0.991233;RPB=0.994727;SGB=43.2083;VDB=0.866636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T392I|399|LOC_Os08g14730|protein_coding|CODING|LOC_Os08g14730.1|5|1) FN3516-S.SNP.8:8862641 chr08:008862641 0 W/8862641-8862641 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.989647;DP=2781;DP4=1370,1342,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40747e-05;MQSB=0.867577;RPB=0.99959;SGB=18.2682;VDB=0.206858;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A350T|399|LOC_Os08g14730|protein_coding|CODING|LOC_Os08g14730.1|5|1) FN1468-S.SNP.8:8870677 chr08:008870677 0 W/8870677-8870677 FN1468-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os08g14744 retrotransposon protein, putative, unclassified SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN2201-S.SNP.8:8871307 chr08:008871307 0 W/8871307-8871307 FN2201-S SNP T -> A AC=1;AN=190;BQB=0.319996;DP=4851;DP4=2113,2464,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206143;MQB=1.56472e-06;MQSB=0.754978;RPB=0.971749;SGB=39.9877;VDB=0.812497;EFF=INTRON(MODIFIER||||663|LOC_Os08g14744|protein_coding|CODING|LOC_Os08g14744.1|2|1) FN3730-S.SNP.8:8872746 chr08:008872746 0 W/8872746-8872746 FN3730-S SNP G -> A AC=2;AN=190;BQB=0.707792;DP=2607;DP4=1311,1194,17,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.89356e-15;MQSB=0.749333;RPB=0.999941;SGB=149.281;VDB=0.938313;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I158|663|LOC_Os08g14744|protein_coding|CODING|LOC_Os08g14744.1|1|1) FN3368-S.SNP.8:8884924 chr08:008884924 0 W/8884924-8884924 FN3368-S SNP C -> T AC=2;AN=184;BQB=0.614263;DP=2888;DP4=1254,1502,19,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.22066e-13;MQSB=0.955597;RPB=0.359857;SGB=88.5747;VDB=0.670729;EFF=INTRON(MODIFIER||||821|LOC_Os08g14770|protein_coding|CODING|LOC_Os08g14770.1|6|1) FN554-S.SNP.8:8886004 chr08:008886004 0 W/8886004-8886004 FN554-S Single Base Substitution A-T INTRON HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN4344-S.SNP.8:8886459 chr08:008886459 0 W/8886459-8886459 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.902556;DP=2573;DP4=1302,1206,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.43076e-07;MQSB=0.992261;RPB=0.974502;SGB=38.987;VDB=0.237602;EFF=INTRON(MODIFIER||||821|LOC_Os08g14770|protein_coding|CODING|LOC_Os08g14770.1|2|1) FN2625-S.SNP.8:8887595 chr08:008887595 0 W/8887595-8887595 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.988308;DP=4865;DP4=2168,2373,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.15354e-08;MQSB=0.993753;RPB=0.33338;SGB=40.2696;VDB=0.504048;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P153|821|LOC_Os08g14770|protein_coding|CODING|LOC_Os08g14770.1|1|1) FN3915-S.SNP.8:8891300 chr08:008891300 0 W/8891300-8891300 FN3915-S SNP A -> T AC=1;AN=158;BQB=0.99977;DP=2734;DP4=1350,1243,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=5.36873e-09;MQSB=0.992642;RPB=0.976665;SGB=68.9144;VDB=0.0613104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.8:8892745 chr08:008892745 0 W/8892745-8892745 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.834767;DP=4702;DP4=2305,2183,3,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2306e-11;MQSB=0.953154;RPB=0.634565;SGB=54.6902;VDB=0.989811;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.8:8894933 chr08:008894933 0 W/8894933-8894933 FN919-S Single Base Substitution C-A INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN-310.SNP.8:8895585 chr08:008895585 0 W/8895585-8895585 FN-310 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g14790 expressed protein SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-219.SNP.8:8897168 chr08:008897168 0 W/8897168-8897168 FN-219 Single Base Substitution C-G INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1666-S.SNP.8:8903194 chr08:008903194 0 W/8903194-8903194 FN1666-S SNP C -> G AC=1;AN=188;BQB=0.640419;DP=4062;DP4=1857,2175,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=19;MQ0F=0.211226;MQB=0.498938;MQSB=0.945292;RPB=0.307978;SGB=16.3413;VDB=0.231533;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.8:8913550 chr08:008913550 0 W/8913550-8913550 FN968-S Single Base Substitution C-G INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3551-S.SNP.8:8919389 chr08:008919389 0 W/8919389-8919389 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.959657;DP=3465;DP4=2182,1185,17,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.73731e-15;MQSB=0.983687;RPB=0.744655;SGB=51.5091;VDB=0.402288;EFF=INTRON(MODIFIER||||102|LOC_Os08g14820|protein_coding|CODING|LOC_Os08g14820.1|1|1) FN2081-S.SNP.8:8920364 chr08:008920364 0 W/8920364-8920364 FN2081-S SNP T -> A AC=1;AN=168;BQB=0.911934;DP=3371;DP4=1390,1951,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.90975e-09;MQSB=0.951061;RPB=0.954059;SGB=51.902;VDB=0.204178;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.8:8925488 chr08:008925488 0 W/8925488-8925488 FN1497-S Single Base Substitution C-T INTRON HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2645-S.SNP.8:8933691 chr08:008933691 0 W/8933691-8933691 FN2645-S SNP A -> G AC=1;AN=200;BQB=0.955094;DP=4930;DP4=2396,2302,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.21438e-12;MQSB=0.960289;RPB=0.795241;SGB=15.9106;VDB=0.330538;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.8:8934050 chr08:008934050 0 W/8934050-8934050 FN692-S Single Base Substitution G-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN692-S.SNP.8:8934051 chr08:008934051 0 W/8934051-8934051 FN692-S Single Base Substitution T-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN1451-S.SNP.8:8945677 chr08:008945677 0 W/8945677-8945677 FN1451-S Single Base Substitution C-A INTRON HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3601-S.SNP.8:8948892 chr08:008948892 0 W/8948892-8948892 FN3601-S SNP G -> A AC=1;AN=190;BQB=0.589909;DP=2760;DP4=1151,1489,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21261e-09;MQSB=0.994632;RPB=0.828967;SGB=21.1058;VDB=0.421624;EFF=INTRON(MODIFIER||||1247|LOC_Os08g14850|protein_coding|CODING|LOC_Os08g14850.1|3|1) FN-172.SNP.8:8954884 chr08:008954884 0 W/8954884-8954884 FN-172 Single Base Substitution A-G INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN3368-S.SNP.8:8962390 chr08:008962390 0 W/8962390-8962390 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.156482;DP=2734;DP4=1377,1248,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.56649e-09;MQSB=0.640447;RPB=0.998584;SGB=33.3622;VDB=0.981493;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.8:8975213 chr08:008975213 0 W/8975213-8975213 FN1665-S Single Base Substitution A-C INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN-384.SNP.8:8980280 chr08:008980280 0 W/8980280-8980280 FN-384 Single Base Substitution A-T INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN3547-S.SNP.8:8983982 chr08:008983982 0 W/8983982-8983982 FN3547-S SNP C -> A AC=1;AN=188;BQB=0.973038;DP=2612;DP4=1230,1314,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.36014e-05;MQSB=0.879586;RPB=0.41217;SGB=26.2637;VDB=0.433529;EFF=INTRON(MODIFIER||||157|LOC_Os08g14910|protein_coding|CODING|LOC_Os08g14910.1|2|1) FN-221.SNP.8:8985044 chr08:008985044 0 W/8985044-8985044 FN-221 Single Base Substitution A-C INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3695-S.SNP.8:8993567 chr08:008993567 0 W/8993567-8993567 FN3695-S SNP C -> T AC=1;AN=190;BQB=0.97001;DP=2867;DP4=1294,1436,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.439e-05;MQSB=0.918667;RPB=0.750751;SGB=35.4339;VDB=0.697668;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S24|93|LOC_Os08g14930|protein_coding|CODING|LOC_Os08g14930.1|2|1) FN3506-S.SNP.8:8997565 chr08:008997565 0 W/8997565-8997565 FN3506-S SNP C -> G AC=1;AN=188;BQB=0.899445;DP=2831;DP4=1328,1429,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26084e-05;MQSB=0.953327;RPB=0.640839;SGB=25.3545;VDB=0.244343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.8:9003996 chr08:009003996 0 W/9003996-9003996 FN3532-S SNP G -> A AC=1;AN=188;BQB=0.957327;DP=2765;DP4=1358,1333,18,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.91625e-13;MQSB=0.845994;RPB=0.999489;SGB=85.3253;VDB=0.685185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G679D|967|LOC_Os08g14940|protein_coding|CODING|LOC_Os08g14940.1|3|1) FN3830-S.SNP.8:9008589 chr08:009008589 0 W/9008589-9008589 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.650285;DP=1890;DP4=1019,788,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.35683e-05;MQSB=0.100167;RPB=0.380537;SGB=39.9877;VDB=0.431287;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.8:9009960 chr08:009009960 0 W/9009960-9009960 FN747-S Single Base Substitution G-A INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3859-S.SNP.8:9010300 chr08:009010300 0 W/9010300-9010300 FN3859-S SNP G -> A AC=2;AN=158;BQB=0.218261;DP=2603;DP4=1142,1308,8,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.13841e-06;MQSB=0.999688;RPB=0.751065;SGB=44.1818;VDB=0.212649;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.8:9017439 chr08:009017439 0 W/9017439-9017439 FN-350 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g14950 receptor-like protein kinase 2 precursor, putative, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2140-S.SNP.8:9017476 chr08:009017476 0 W/9017476-9017476 FN2140-S SNP T -> G AC=1;AN=168;BQB=0.273695;DP=3665;DP4=2127,1481,16,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.68912e-11;MQSB=0.986751;RPB=0.193788;SGB=-82.1908;VDB=0.224569;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L174R|971|LOC_Os08g14950|protein_coding|CODING|LOC_Os08g14950.1|1|1) FN2282.SNP.8:9031989 chr08:009031989 0 W/9031989-9031989 FN2282 SNP G -> A AC=1;AN=192;BQB=0.00799407;DP=4964;DP4=2017,2557,20,34;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.40619e-23;MQSB=0.834373;RPB=0.648349;SGB=-286.119;VDB=0.976671;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.8:9038290 chr08:009038290 0 W/9038290-9038290 FN3823-S SNP T -> C AC=1;AN=190;BQB=0.939121;DP=2561;DP4=1112,1370,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.62059e-08;MQSB=0.982496;RPB=0.868949;SGB=49.0954;VDB=0.129134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.8:9064835 chr08:009064835 0 W/9064835-9064835 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.576791;DP=4099;DP4=2124,1726,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86455e-07;MQSB=0.939382;RPB=0.326469;SGB=45.0543;VDB=0.591503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.8:9065556 chr08:009065556 0 W/9065556-9065556 FN2318 SNP A -> T AC=1;AN=192;BQB=0.317498;DP=4861;DP4=2429,2202,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.70319e-09;MQSB=0.894952;RPB=0.336825;SGB=43.3444;VDB=0.984207;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.8:9071121 chr08:009071121 0 W/9071121-9071121 FN704-S Single Base Substitution G-A INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2539-S.SNP.8:9072415 chr08:009072415 0 W/9072415-9072415 FN2539-S SNP A -> T AC=1;AN=198;BQB=0.693546;DP=4140;DP4=1814,2151,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.65509e-11;MQSB=0.998726;RPB=0.93947;SGB=29.3443;VDB=0.986376;EFF=INTRON(MODIFIER||||363|LOC_Os08g15030|protein_coding|CODING|LOC_Os08g15030.1|4|1) FN3933-S.SNP.8:9086762 chr08:009086762 0 W/9086762-9086762 FN3933-S SNP C -> T AC=2;AN=158;BQB=0.45783;DP=2324;DP4=1136,1089,9,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.03598e-09;MQSB=0.980816;RPB=0.978866;SGB=33.2965;VDB=0.628046;EFF=INTERGENIC(MODIFIER||||||||||1) FN-72.SNP.8:9089638 chr08:009089638 0 W/9089638-9089638 FN-72 Single Base Substitution A-T INTERGENIC HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2771-S.SNP.8:9095588 chr08:009095588 0 W/9095588-9095588 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.991072;DP=4399;DP4=1921,2285,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.23205e-07;MQSB=0.971565;RPB=0.967413;SGB=21.559;VDB=0.948835;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.8:9098972 chr08:009098972 0 W/9098972-9098972 FN1058-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g15050 CCT/B-box zinc finger protein, putative, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1058-S.SNP.8:9098973 chr08:009098973 0 W/9098973-9098973 FN1058-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g15050 CCT/B-box zinc finger protein, putative, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1325-S.SNP.8:9101308 chr08:009101308 0 W/9101308-9101308 FN1325-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN367-S.SNP.8:9102483 chr08:009102483 0 W/9102483-9102483 FN367-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g15060 ATP binding protein, putative, expressed SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3494-S.SNP.8:9113028 chr08:009113028 0 W/9113028-9113028 FN3494-S SNP G -> C AC=2;AN=184;BQB=0.541502;DP=2339;DP4=1358,860,16,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.34978e-14;MQSB=0.987845;RPB=0.998233;SGB=139.178;VDB=0.997097;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.8:9121275 chr08:009121275 0 W/9121275-9121275 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN454-S.SNP.8:9128738 chr08:009128738 0 W/9128738-9128738 FN454-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g15090 diacylglycerol kinase catalytic domain family protein, expressed SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN2572-S.SNP.8:9136073 chr08:009136073 0 W/9136073-9136073 FN2572-S Single Base Substitution G-A INTRON HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN1640-S.SNP.8:9145625 chr08:009145625 0 W/9145625-9145625 FN1640-S Single Base Substitution A-C INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2753-S.SNP.8:9151688 chr08:009151688 0 W/9151688-9151688 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.180158;DP=4703;DP4=2302,2041,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35725e-11;MQSB=0.983829;RPB=0.934842;SGB=22.3313;VDB=0.131773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S198G|615|LOC_Os08g15100|protein_coding|CODING|LOC_Os08g15100.1|3|1) FN3421-S.SNP.8:9153722 chr08:009153722 0 W/9153722-9153722 FN3421-S SNP C -> G AC=1;AN=184;BQB=0.988461;DP=3662;DP4=1563,2019,3,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.55886e-09;MQSB=0.936099;RPB=0.987699;SGB=62.3078;VDB=0.808337;EFF=INTRON(MODIFIER||||615|LOC_Os08g15100|protein_coding|CODING|LOC_Os08g15100.1|8|1) FN3893-S.SNP.8:9154882 chr08:009154882 0 W/9154882-9154882 FN3893-S SNP C -> T AC=1;AN=158;BQB=0.985528;DP=2502;DP4=1210,1216,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.68447e-05;MQSB=0.94111;RPB=0.945658;SGB=38.3284;VDB=0.916279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V125M|153|LOC_Os08g15110|protein_coding|CODING|LOC_Os08g15110.1|2|1) FN2116-S.SNP.8:9160818 chr08:009160818 0 W/9160818-9160818 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.093645;DP=2824;DP4=1597,1180,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.03219e-13;MQSB=0.941564;RPB=0.988941;SGB=-123.754;VDB=0.75138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.8:9160835 chr08:009160835 0 W/9160835-9160835 FN2116-S SNP G -> A AC=1;AN=168;BQB=0.104774;DP=2914;DP4=1659,1204,15,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.82098e-14;MQSB=0.919908;RPB=0.998776;SGB=-165.748;VDB=0.303267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.8:9171692 chr08:009171692 0 W/9171692-9171692 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.0282279;DP=4864;DP4=2258,2085,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000411184;MQB=0.000121688;MQSB=0.0236252;RPB=0.396563;SGB=-35.4322;VDB=0.651573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.8:9172337 chr08:009172337 0 W/9172337-9172337 FN3978-S SNP G -> A AC=1;AN=168;BQB=0.864761;DP=2769;DP4=1195,1470,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=8.72299e-05;MQSB=0.207548;RPB=0.473357;SGB=21.0249;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.8:9176022 chr08:009176022 0 W/9176022-9176022 FN2308 SNP T -> C AC=1;AN=192;BQB=0.978826;DP=1423;DP4=427,867,2,9;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=0.00456224;MQSB=6.80149e-20;RPB=0.980109;SGB=-2.03126;VDB=0.000525768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.8:9182140 chr08:009182140 0 W/9182140-9182140 FN2545-S SNP A -> T AC=1;AN=188;BQB=0.228994;DP=3565;DP4=1399,1955,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93304e-06;MQSB=0.762053;RPB=0.401725;SGB=49.5489;VDB=0.452273;EFF=INTERGENIC(MODIFIER||||||||||1) 701-3.SNP.8:9183080 chr08:009183080 0 W/9183080-9183080 701-3 Single Base Substitution G-A INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN2549-S.SNP.8:9186171 chr08:009186171 0 W/9186171-9186171 FN2549-S SNP C -> T AC=2;AN=188;BQB=0.65286;DP=4007;DP4=1893,1951,9,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.32797e-09;MQSB=0.709967;RPB=0.966089;SGB=67.9293;VDB=0.634679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.8:9186680 chr08:009186680 0 W/9186680-9186680 FN3709-S SNP C -> T AC=1;AN=190;BQB=0.997279;DP=2810;DP4=1214,1498,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.7986e-10;MQSB=0.902072;RPB=0.973113;SGB=43.2083;VDB=0.362756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.8:9186705 chr08:009186705 0 W/9186705-9186705 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.684977;DP=3644;DP4=1700,1906,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08674e-06;MQSB=0.973475;RPB=0.587846;SGB=-15.3725;VDB=0.607884;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.8:9186752 chr08:009186752 0 W/9186752-9186752 FN3323-S SNP T -> G AC=1;AN=184;BQB=0.619348;DP=3251;DP4=1480,1671,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000226775;MQSB=0.92808;RPB=0.892711;SGB=18.1394;VDB=0.389581;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.8:9188721 chr08:009188721 0 W/9188721-9188721 FN961-S Single Base Substitution G-A INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2444.SNP.8:9190315 chr08:009190315 0 W/9190315-9190315 FN2444 SNP G -> C AC=2;AN=200;BQB=0.999475;DP=4864;DP4=2103,2351,25,29;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=8.70107e-22;MQSB=2.95442e-07;RPB=0.850808;SGB=125.876;VDB=0.532666;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN-345 Single Base Substitution C-T INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2279-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.159002;DP=3891;DP4=1660,1921,23,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48928e-22;MQSB=0.00114567;RPB=0.94819;SGB=231.25;VDB=0.717952;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN3555-S SNP C -> T AC=2;AN=188;BQB=0.790402;DP=3020;DP4=1823,1099,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.46965e-14;MQSB=0.996849;RPB=0.493397;SGB=92.677;VDB=0.69822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN3665-S SNP C -> T AC=2;AN=190;BQB=0.959343;DP=2439;DP4=1251,1045,31,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.27846e-26;MQSB=0.409262;RPB=0.726009;SGB=199.228;VDB=0.306708;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.281307;DP=2833;DP4=1574,1147,21,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.83523e-17;MQSB=0.984736;RPB=0.822093;SGB=116.377;VDB=0.515415;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN725-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN836-S.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 FN836-S Single Base Substitution C-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W453-3-1.SNP.8:9191549 chr08:009191549 0 W/9191549-9191549 W453-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2085-S.SNP.8:9196504 chr08:009196504 0 W/9196504-9196504 FN2085-S SNP G -> T AC=1;AN=168;BQB=0.0565795;DP=3180;DP4=1654,1492,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3999e-11;MQSB=0.961282;RPB=0.999053;SGB=-100.631;VDB=0.851387;EFF=INTRON(MODIFIER||||210|LOC_Os08g15204|protein_coding|CODING|LOC_Os08g15204.1|2|1),INTRON(MODIFIER||||160|LOC_Os08g15204|protein_coding|CODING|LOC_Os08g15204.2|1|1) FN2085-S.SNP.8:9196505 chr08:009196505 0 W/9196505-9196505 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.0174999;DP=3192;DP4=1657,1499,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.04316e-08;MQSB=0.96197;RPB=0.827495;SGB=-103.201;VDB=0.542624;EFF=INTRON(MODIFIER||||210|LOC_Os08g15204|protein_coding|CODING|LOC_Os08g15204.1|2|1),INTRON(MODIFIER||||160|LOC_Os08g15204|protein_coding|CODING|LOC_Os08g15204.2|1|1) 704-1-1.SNP.8:9200899 chr08:009200899 0 W/9200899-9200899 704-1-1 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN2265-S.SNP.8:9221906 chr08:009221906 0 W/9221906-9221906 FN2265-S SNP A -> G AC=2;AN=190;BQB=0.996189;DP=5023;DP4=2588,2119,22,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000199084;MQB=1.03666e-20;MQSB=0.968342;RPB=0.978772;SGB=139.163;VDB=0.37731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.8:9226134 chr08:009226134 0 W/9226134-9226134 FN2451 SNP C -> T AC=2;AN=200;BQB=0.800127;DP=4224;DP4=1793,2110,23,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.35646e-28;MQSB=0.939912;RPB=0.886879;SGB=177.266;VDB=0.161887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A536T|1041|LOC_Os08g15230|protein_coding|CODING|LOC_Os08g15230.1|3|1) FN3809-S.SNP.8:9226781 chr08:009226781 0 W/9226781-9226781 FN3809-S SNP T -> A AC=2;AN=190;BQB=0.995444;DP=3398;DP4=1351,1801,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.86077e-14;MQSB=0.449636;RPB=0.932685;SGB=92.9626;VDB=0.417313;EFF=INTRON(MODIFIER||||1041|LOC_Os08g15230|protein_coding|CODING|LOC_Os08g15230.1|1|1) FN1232-S.SNP.8:9231793 chr08:009231793 0 W/9231793-9231793 FN1232-S Single Base Substitution A-G INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN561-S.SNP.8:9242663 chr08:009242663 0 W/9242663-9242663 FN561-S Single Base Substitution C-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN734-S.SNP.8:9286923 chr08:009286923 0 W/9286923-9286923 FN734-S Single Base Substitution A-T INTERGENIC HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN2674-S.SNP.8:9290388 chr08:009290388 0 W/9290388-9290388 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.935772;DP=4738;DP4=2286,2259,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.08918e-14;MQSB=0.649832;RPB=0.603976;SGB=69.1109;VDB=0.312946;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.8:9290990 chr08:009290990 0 W/9290990-9290990 FN3510-S SNP G -> C AC=2;AN=188;BQB=0.999925;DP=2528;DP4=1156,1277,16,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.97635e-18;MQSB=0.992544;RPB=0.998229;SGB=130.758;VDB=0.0141208;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.8:9295657 chr08:009295657 0 W/9295657-9295657 FN1124-S Single Base Substitution T-A INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2734-S.SNP.8:9297474 chr08:009297474 0 W/9297474-9297474 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.788565;DP=4781;DP4=2046,2480,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24074e-16;MQSB=0.9886;RPB=0.690761;SGB=123.342;VDB=0.347253;EFF=INTERGENIC(MODIFIER||||||||||1) FN-118.SNP.8:9299331 chr08:009299331 0 W/9299331-9299331 FN-118 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g15290 retrotransposon protein, putative, unclassified, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN3782-S.SNP.8:9299331 chr08:009299331 0 W/9299331-9299331 FN3782-S SNP C -> A AC=1;AN=190;BQB=0.925756;DP=3085;DP4=1412,1538,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35216e-12;MQSB=0.99868;RPB=0.673192;SGB=57.4238;VDB=0.596749;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P111T|489|LOC_Os08g15290|protein_coding|CODING|LOC_Os08g15290.1|1|1) FN2477.SNP.8:9302987 chr08:009302987 0 W/9302987-9302987 FN2477 SNP C -> T AC=2;AN=200;BQB=0.718929;DP=4214;DP4=1930,2040,19,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.16626e-23;MQSB=0.982356;RPB=0.999885;SGB=183.209;VDB=0.00735381;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q927|1186|LOC_Os08g15300|protein_coding|CODING|LOC_Os08g15300.1|6|1) W246-5-1.SNP.8:9309255 chr08:009309255 0 W/9309255-9309255 W246-5-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g15310 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3982-S.SNP.8:9319445 chr08:009319445 0 W/9319445-9319445 FN3982-S SNP G -> T AC=2;AN=168;BQB=0.992092;DP=2310;DP4=1050,1158,9,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.85382e-08;MQSB=0.942406;RPB=0.786135;SGB=65.4653;VDB=0.267433;EFF=INTERGENIC(MODIFIER||||||||||1) FN4180-S.SNP.8:9327246 chr08:009327246 0 W/9327246-9327246 FN4180-S SNP T -> A AC=2;AN=170;BQB=0.949704;DP=2357;DP4=1048,1211,15,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.64868e-15;MQSB=0.984317;RPB=0.97516;SGB=101.184;VDB=0.39118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.8:9329791 chr08:009329791 0 W/9329791-9329791 FN3058-S SNP T -> C AC=2;AN=184;BQB=0.941025;DP=2924;DP4=1251,1496,21,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.79749e-22;MQSB=0.997116;RPB=0.887365;SGB=96.407;VDB=0.154328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.8:9335198 chr08:009335198 0 W/9335198-9335198 FN1270-S Single Base Substitution C-G INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN781-S.SNP.8:9358191 chr08:009358191 0 W/9358191-9358191 FN781-S Single Base Substitution G-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2421.SNP.8:9362341 chr08:009362341 0 W/9362341-9362341 FN2421 SNP G -> A AC=2;AN=200;BQB=0.739497;DP=4555;DP4=2259,1933,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.79363e-21;MQSB=0.341179;RPB=0.358289;SGB=141.214;VDB=0.364515;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.8:9368134 chr08:009368134 0 W/9368134-9368134 FN3594-S SNP C -> T AC=1;AN=188;BQB=0.978033;DP=2945;DP4=1428,1389,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.13571e-12;MQSB=0.848785;RPB=0.990948;SGB=89.8686;VDB=0.982741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.8:9370125 chr08:009370125 0 W/9370125-9370125 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1436-S.SNP.8:9370513 chr08:009370513 0 W/9370513-9370513 FN1436-S Single Base Substitution G-A STOP_GAINED HET LOC_Os08g15400 retrotransposon protein, putative, unclassified, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2081-S.SNP.8:9372093 chr08:009372093 0 W/9372093-9372093 FN2081-S SNP C -> A AC=1;AN=168;BQB=0.253867;DP=2114;DP4=891,1167,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000473037;MQB=1.01475e-08;MQSB=0.999979;RPB=0.874718;SGB=15.6372;VDB=0.976182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L409F|647|LOC_Os08g15400|protein_coding|CODING|LOC_Os08g15400.1|7|1) FN2690-S.SNP.8:9374561 chr08:009374561 0 W/9374561-9374561 FN2690-S SNP T -> C AC=1;AN=200;BQB=0.298641;DP=4769;DP4=2201,2178,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.23578e-07;MQSB=0.809544;RPB=0.776268;SGB=21.6694;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.8:9385584 chr08:009385584 0 W/9385584-9385584 FN406-S Single Base Substitution T-C INTRON HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN488-S.SNP.8:9385661 chr08:009385661 0 W/9385661-9385661 FN488-S Single Base Substitution A-T INTRON HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1071-S.SNP.8:9388425 chr08:009388425 0 W/9388425-9388425 FN1071-S Single Base Substitution A-T INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN2153-S.SNP.8:9406953 chr08:009406953 0 W/9406953-9406953 FN2153-S SNP G -> A AC=2;AN=168;BQB=0.86106;DP=4590;DP4=2466,2013,37,38;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.89621e-39;MQSB=0.995737;RPB=0.745829;SGB=-149.666;VDB=0.292606;EFF=INTRON(MODIFIER||||556|LOC_Os08g15460|protein_coding|CODING|LOC_Os08g15460.1|2|1),INTRON(MODIFIER||||340|LOC_Os08g15460|protein_coding|CODING|LOC_Os08g15460.2|2|1) FN1639-S.SNP.8:9418188 chr08:009418188 0 W/9418188-9418188 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN1639-S.SNP.8:9418189 chr08:009418189 0 W/9418189-9418189 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN1280-S.SNP.8:9422088 chr08:009422088 0 W/9422088-9422088 FN1280-S Single Base Substitution C-G INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2404.SNP.8:9423852 chr08:009423852 0 W/9423852-9423852 FN2404 SNP T -> A AC=1;AN=200;BQB=0.706955;DP=5195;DP4=2258,2543,18,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16431e-18;MQSB=0.923405;RPB=0.401061;SGB=76.378;VDB=0.658668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.8:9424587 chr08:009424587 0 W/9424587-9424587 FN3595-S SNP T -> C AC=1;AN=190;BQB=0.920466;DP=2471;DP4=670,1668,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05865e-06;MQSB=0.386649;RPB=0.406213;SGB=32.5467;VDB=0.163812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.8:9429667 chr08:009429667 0 W/9429667-9429667 FN1330-S Single Base Substitution G-T INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN883-S.SNP.8:9434679 chr08:009434679 0 W/9434679-9434679 FN883-S Single Base Substitution A-G INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN4140-S.SNP.8:9436410 chr08:009436410 0 W/9436410-9436410 FN4140-S SNP G -> A AC=1;AN=170;BQB=0.976363;DP=2402;DP4=1158,1171,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.91739e-08;MQSB=0.847524;RPB=0.986603;SGB=56.7575;VDB=0.888366;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D284|469|LOC_Os08g15510|protein_coding|CODING|LOC_Os08g15510.1|4|1) FN3950-S.SNP.8:9451882 chr08:009451882 0 W/9451882-9451882 FN3950-S SNP T -> C AC=2;AN=168;BQB=0.881227;DP=2621;DP4=1322,1149,14,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.56129e-16;MQSB=0.999129;RPB=0.950671;SGB=93.0718;VDB=0.713555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K67R|80|LOC_Os08g15545|protein_coding|CODING|LOC_Os08g15545.1|2|1) FN441-S.SNP.8:9452014 chr08:009452014 0 W/9452014-9452014 FN441-S Single Base Substitution T-A INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN534-S.SNP.8:9453021 chr08:009453021 0 W/9453021-9453021 FN534-S Single Base Substitution C-T INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3455-S.SNP.8:9453239 chr08:009453239 0 W/9453239-9453239 FN3455-S SNP T -> A AC=2;AN=184;BQB=0.45833;DP=2400;DP4=1208,1100,14,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.20729e-11;MQSB=0.994307;RPB=0.0931911;SGB=93.9603;VDB=0.37851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.8:9456123 chr08:009456123 0 W/9456123-9456123 FN2765-S SNP T -> C AC=1;AN=198;BQB=0.0922988;DP=6321;DP4=3571,2307,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=15;MQ0F=0.354216;MQB=0.0370505;MQSB=0;RPB=0.479285;SGB=-109.869;VDB=0.970454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.8:9456156 chr08:009456156 0 W/9456156-9456156 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.847824;DP=5870;DP4=3326,2165,16,6;HOB=5.10152e-05;ICB=0.000102546;MQ=17;MQ0F=0.332538;MQB=0.0316184;MQSB=0;RPB=0.125733;SGB=15.7299;VDB=0.551002;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.8:9463745 chr08:009463745 0 W/9463745-9463745 FN951-S Single Base Substitution G-A INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3881-S.SNP.8:9472621 chr08:009472621 0 W/9472621-9472621 FN3881-S SNP C -> T AC=1;AN=158;BQB=0.737615;DP=2969;DP4=1173,1668,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.143483;MQB=0.360751;MQSB=0.0299926;RPB=0.996373;SGB=23.8187;VDB=0.146644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G245D|826|LOC_Os08g15580|protein_coding|CODING|LOC_Os08g15580.1|1|1) FN-290.SNP.8:9479711 chr08:009479711 0 W/9479711-9479711 FN-290 Single Base Substitution G-T INTRON HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN3569-S.SNP.8:9484637 chr08:009484637 0 W/9484637-9484637 FN3569-S SNP G -> C AC=1;AN=188;BQB=0.952706;DP=3437;DP4=1922,1432,19,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.92138e-15;MQSB=0.973332;RPB=0.285143;SGB=74.9605;VDB=0.545786;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G93R|251|LOC_Os08g15610|protein_coding|CODING|LOC_Os08g15610.1|1|1) FN1129-S.SNP.8:9489534 chr08:009489534 0 W/9489534-9489534 FN1129-S Single Base Substitution A-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2630-S.SNP.8:9496623 chr08:009496623 0 W/9496623-9496623 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.982608;DP=5223;DP4=2379,2599,14,8;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.029485;MQB=0.171424;MQSB=0.000271588;RPB=0.999926;SGB=69.1109;VDB=0.410894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.8:9512070 chr08:009512070 0 W/9512070-9512070 FN2359 SNP T -> C AC=2;AN=192;BQB=0.999439;DP=5057;DP4=2314,2309,33,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.05764e-29;MQSB=0.570882;RPB=0.999915;SGB=66.8;VDB=0.113024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V128A|933|LOC_Os08g15660|protein_coding|CODING|LOC_Os08g15660.1|3|1) FN2102-S.SNP.8:9515721 chr08:009515721 0 W/9515721-9515721 FN2102-S SNP C -> A AC=1;AN=168;BQB=0.100538;DP=2793;DP4=1403,1341,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97236e-05;MQSB=0.490147;RPB=0.806813;SGB=5.62151;VDB=0.466821;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.8:9516709 chr08:009516709 0 W/9516709-9516709 W360-2S-2 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g15670 retrotransposon protein, putative, unclassified, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN517-S.SNP.8:9522424 chr08:009522424 0 W/9522424-9522424 FN517-S Single Base Substitution C-G INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3795-S.SNP.8:9523135 chr08:009523135 0 W/9523135-9523135 FN3795-S SNP A -> G AC=1;AN=190;BQB=0.610272;DP=2480;DP4=1058,1174,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01449e-06;MQSB=0.773297;RPB=0.0157054;SGB=2.55724;VDB=0.454779;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L58|190|LOC_Os08g15680|protein_coding|CODING|LOC_Os08g15680.1|2|1) FN3950-S.SNP.8:9525027 chr08:009525027 0 W/9525027-9525027 FN3950-S SNP C -> T AC=2;AN=168;BQB=0.913568;DP=2810;DP4=1110,1579,13,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.91323e-21;MQSB=0.935267;RPB=0.999933;SGB=167.374;VDB=0.604314;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.8:9526908 chr08:009526908 0 W/9526908-9526908 FN-172 Single Base Substitution A-G INTRON HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN4167-S.SNP.8:9541496 chr08:009541496 0 W/9541496-9541496 FN4167-S SNP G -> A AC=2;AN=170;BQB=0.207426;DP=2440;DP4=1191,1166,9,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.40143e-08;MQSB=0.998712;RPB=0.936481;SGB=72.7472;VDB=0.442651;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.8:9545895 chr08:009545895 0 W/9545895-9545895 FN3800-S SNP A -> G AC=1;AN=190;BQB=0.934115;DP=2896;DP4=1372,1398,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78122e-12;MQSB=0.95823;RPB=0.438613;SGB=80.9724;VDB=0.467676;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.8:9549526 chr08:009549526 0 W/9549526-9549526 FN626-S Single Base Substitution A-T INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3800-S.SNP.8:9549557 chr08:009549557 0 W/9549557-9549557 FN3800-S SNP T -> C AC=1;AN=190;BQB=0.401212;DP=2742;DP4=1317,1247,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.39028e-06;MQSB=0.933803;RPB=0.200598;SGB=15.9981;VDB=0.30597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.8:9549708 chr08:009549708 0 W/9549708-9549708 FN1299-S Single Base Substitution A-T INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN817-S.SNP.8:9550414 chr08:009550414 0 W/9550414-9550414 FN817-S Single Base Substitution C-T INTERGENIC HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN3489-S.SNP.8:9560509 chr08:009560509 0 W/9560509-9560509 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.48618;DP=3386;DP4=1221,2044,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79902e-09;MQSB=0.98689;RPB=0.461735;SGB=60.4004;VDB=0.762878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.8:9563215 chr08:009563215 0 W/9563215-9563215 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.972772;DP=3435;DP4=1937,1433,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0387191;MQB=0.999888;MQSB=1.00755e-23;RPB=0.895946;SGB=26.2637;VDB=0.615769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.8:9568445 chr08:009568445 0 W/9568445-9568445 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.86818;DP=3783;DP4=1784,1925,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00634417;MQB=0.00570596;MQSB=4.1279e-06;RPB=0.964259;SGB=53.5223;VDB=0.412011;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.8:9573849 chr08:009573849 0 W/9573849-9573849 FN810-S Single Base Substitution C-T INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1001-S.SNP.8:9573872 chr08:009573872 0 W/9573872-9573872 FN1001-S Single Base Substitution C-A INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN695-S.SNP.8:9581802 chr08:009581802 0 W/9581802-9581802 FN695-S Single Base Substitution A-T INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN996-S.SNP.8:9591308 chr08:009591308 0 W/9591308-9591308 FN996-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN3821-S.SNP.8:9591475 chr08:009591475 0 W/9591475-9591475 FN3821-S SNP G -> C AC=1;AN=190;BQB=0.931241;DP=2902;DP4=1139,1661,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00068918;MQB=2.8018e-09;MQSB=0.785379;RPB=0.729206;SGB=62.7569;VDB=0.866121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tCg|W742S|820|LOC_Os08g15800|protein_coding|CODING|LOC_Os08g15800.1|5|1) FN3575-S.SNP.8:9593849 chr08:009593849 0 W/9593849-9593849 FN3575-S SNP G -> C AC=2;AN=188;BQB=0.983188;DP=2839;DP4=1210,1525,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.35323e-14;MQSB=0.986788;RPB=0.816583;SGB=103.498;VDB=0.206913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.8:9600886 chr08:009600886 0 W/9600886-9600886 FN3783-S SNP T -> A AC=1;AN=190;BQB=0.800177;DP=2519;DP4=1150,1285,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.9605e-05;MQSB=0.226171;RPB=0.870471;SGB=28.9929;VDB=0.991985;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN-73 Single Base Substitution G-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1480-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN1480-S Single Base Substitution G-A INTERGENIC Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1655-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN1655-S Single Base Substitution G-A INTERGENIC Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN2149-S SNP G -> A AC=2;AN=168;BQB=0.0284515;DP=3543;DP4=1465,2020,22,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.1249e-18;MQSB=0.967022;RPB=0.953562;SGB=-51.4578;VDB=0.934734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN2322 SNP G -> A AC=2;AN=192;BQB=0.977508;DP=4748;DP4=2057,2379,24,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.06553e-19;MQSB=0.264705;RPB=0.63126;SGB=48.0279;VDB=0.842058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN2411 SNP G -> A AC=2;AN=200;BQB=0.912082;DP=4403;DP4=1822,2251,35,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.03786e-31;MQSB=0.919812;RPB=0.944463;SGB=217.553;VDB=0.803462;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN2675-S SNP G -> A AC=2;AN=200;BQB=0.960277;DP=4828;DP4=2078,2446,27,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.06923e-24;MQSB=0.857132;RPB=0.219177;SGB=152.03;VDB=0.403307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.730103;DP=2879;DP4=1398,1387,19,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.02807e-13;MQSB=0.846651;RPB=0.181141;SGB=92.0965;VDB=0.104766;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN3948-S SNP G -> A AC=2;AN=168;BQB=0.747266;DP=2542;DP4=1100,1328,23,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.27554e-21;MQSB=0.661182;RPB=0.595231;SGB=185.097;VDB=0.06377;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN461-S Single Base Substitution G-A INTERGENIC HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN564-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN564-S Single Base Substitution G-A INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN709-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN709-S Single Base Substitution G-A INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN928-S.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 FN928-S Single Base Substitution G-A INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. N1-130-2.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 N1-130-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1377, Mutant_ID: N1-130-2, Generation: M2, Mutations: 30, Genes: 7, Seed availability: Yes. N1-130-3.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 N1-130-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. W598-2-1.SNP.8:9601011 chr08:009601011 0 W/9601011-9601011 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2088-S.SNP.8:9601094 chr08:009601094 0 W/9601094-9601094 FN2088-S SNP T -> C AC=1;AN=168;BQB=0.0037079;DP=3447;DP4=1563,1837,16,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00176e-11;MQSB=0.983809;RPB=0.859592;SGB=-165.748;VDB=0.348525;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.8:9601405 chr08:009601405 0 W/9601405-9601405 FN779-S Single Base Substitution G-C INTERGENIC HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN1424-S.SNP.8:9601478 chr08:009601478 0 W/9601478-9601478 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN854-S.SNP.8:9608438 chr08:009608438 0 W/9608438-9608438 FN854-S Single Base Substitution C-T INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3371-S.SNP.8:9613691 chr08:009613691 0 W/9613691-9613691 FN3371-S SNP G -> A AC=2;AN=184;BQB=0.0556088;DP=2316;DP4=992,882,11,36;HOB=0.0215028;ICB=0.494625;MQ=26;MQ0F=0.19171;MQB=0.825168;MQSB=2.09347e-25;RPB=0.00894073;SGB=-539.961;VDB=0.292109;EFF=INTRON(MODIFIER||||1176|LOC_Os08g15830|protein_coding|CODING|LOC_Os08g15830.1|1|1) FN-287.SNP.8:9614142 chr08:009614142 0 W/9614142-9614142 FN-287 Single Base Substitution C-T INTRON HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN1568-S.SNP.8:9614618 chr08:009614618 0 W/9614618-9614618 FN1568-S Single Base Substitution C-T STOP_GAINED HET LOC_Os08g15830 retrotransposon protein, putative, unclassified, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN3577-S.SNP.8:9620194 chr08:009620194 0 W/9620194-9620194 FN3577-S SNP A -> G AC=1;AN=188;BQB=0.769116;DP=3554;DP4=1681,1672,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07826e-15;MQSB=0.909478;RPB=0.0688198;SGB=-9.02352;VDB=0.0688853;EFF=INTRON(MODIFIER||||1176|LOC_Os08g15830|protein_coding|CODING|LOC_Os08g15830.1|3|1) FN-218.SNP.8:9625633 chr08:009625633 0 W/9625633-9625633 FN-218 Single Base Substitution G-C INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1411-S.SNP.8:9625898 chr08:009625898 0 W/9625898-9625898 FN1411-S Single Base Substitution C-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN358-S.SNP.8:9627840 chr08:009627840 0 W/9627840-9627840 FN358-S Single Base Substitution G-A INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN4229-S.SNP.8:9629003 chr08:009629003 0 W/9629003-9629003 FN4229-S SNP C -> A AC=2;AN=170;BQB=0.930002;DP=2641;DP4=1312,1258,21,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.76005e-21;MQSB=0.922223;RPB=0.999978;SGB=154.496;VDB=0.921177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L424F|495|LOC_Os08g15840|protein_coding|CODING|LOC_Os08g15840.1|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L424F|495|LOC_Os08g15840|protein_coding|CODING|LOC_Os08g15840.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L424F|495|LOC_Os08g15840|protein_coding|CODING|LOC_Os08g15840.4|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L424F|495|LOC_Os08g15840|protein_coding|CODING|LOC_Os08g15840.5|11|1) FN864-S.SNP.8:9630218 chr08:009630218 0 W/9630218-9630218 FN864-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g15840 ankyrin repeat-rich protein, putative, expressed SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN700-S.SNP.8:9634010 chr08:009634010 0 W/9634010-9634010 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1119-S.SNP.8:9636022 chr08:009636022 0 W/9636022-9636022 FN1119-S Single Base Substitution A-G INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3971-S.SNP.8:9638228 chr08:009638228 0 W/9638228-9638228 FN3971-S SNP C -> T AC=2;AN=168;BQB=0.921863;DP=2815;DP4=1285,1360,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.14961e-11;MQSB=0.999993;RPB=0.134578;SGB=15.6372;VDB=0.136433;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.8:9640254 chr08:009640254 0 W/9640254-9640254 FN-154 Single Base Substitution G-A INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN-171.SNP.8:9643852 chr08:009643852 0 W/9643852-9643852 FN-171 Single Base Substitution T-A INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN_830-6-1.SNP.8:9643852 chr08:009643852 0 W/9643852-9643852 FN_830-6-1 Single Base Substitution T-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1069-S.SNP.8:9650377 chr08:009650377 0 W/9650377-9650377 FN1069-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g15870 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. W427-1-1.SNP.8:9652901 chr08:009652901 0 W/9652901-9652901 W427-1-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g15870 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2398.SNP.8:9655599 chr08:009655599 0 W/9655599-9655599 FN2398 SNP T -> C AC=2;AN=200;BQB=0.721948;DP=5185;DP4=2603,2225,16,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000192864;MQB=5.89859e-24;MQSB=0.377166;RPB=0.991284;SGB=94.6142;VDB=0.576259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.8:9657013 chr08:009657013 0 W/9657013-9657013 FN3992-S SNP G -> A AC=2;AN=168;BQB=0.963689;DP=3201;DP4=1236,1844,21,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.77916e-18;MQSB=0.93552;RPB=0.458881;SGB=158.512;VDB=0.439146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.8:9660104 chr08:009660104 0 W/9660104-9660104 FN1624-S Single Base Substitution C-T INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2529-S.SNP.8:9661657 chr08:009661657 0 W/9661657-9661657 FN2529-S SNP G -> A AC=2;AN=198;BQB=0.779814;DP=4055;DP4=2048,1773,7,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.33718e-17;MQSB=0.805869;RPB=0.928147;SGB=123.071;VDB=0.069288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.8:9663263 chr08:009663263 0 W/9663263-9663263 FN2574-S SNP T -> C AC=1;AN=198;BQB=0.155494;DP=4131;DP4=2116,1765,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.3681e-06;MQSB=0.636068;RPB=0.269725;SGB=40.3588;VDB=0.25953;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.8:9664461 chr08:009664461 0 W/9664461-9664461 FN_552-1-1 Single Base Substitution G-A Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN554-S.SNP.8:9665570 chr08:009665570 0 W/9665570-9665570 FN554-S Single Base Substitution A-T INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1561-S.SNP.8:9670621 chr08:009670621 0 W/9670621-9670621 FN1561-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g15880 NBS-LRR disease resistance protein, putative, expressed SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1012-S.SNP.8:9671920 chr08:009671920 0 W/9671920-9671920 FN1012-S Single Base Substitution G-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN4300-S.SNP.8:9672534 chr08:009672534 0 W/9672534-9672534 FN4300-S SNP T -> C AC=1;AN=170;BQB=0.996521;DP=1984;DP4=965,918,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000504032;MQB=1.29836e-05;MQSB=0.765704;RPB=0.264165;SGB=27.9928;VDB=0.520342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.8:9676455 chr08:009676455 0 W/9676455-9676455 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.988825;DP=2895;DP4=1311,1516,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.45064e-08;MQSB=0.986723;RPB=0.208668;SGB=39.5276;VDB=0.281338;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A167|206|LOC_Os08g15890|protein_coding|CODING|LOC_Os08g15890.1|3|1) FN-97.SNP.8:9676632 chr08:009676632 0 W/9676632-9676632 FN-97 Single Base Substitution C-A INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1086-S.SNP.8:9688631 chr08:009688631 0 W/9688631-9688631 FN1086-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN937-S.SNP.8:9690750 chr08:009690750 0 W/9690750-9690750 FN937-S Single Base Substitution C-G INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN789-S.SNP.8:9693859 chr08:009693859 0 W/9693859-9693859 FN789-S Single Base Substitution T-C INTRON HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2136-S.SNP.8:9695568 chr08:009695568 0 W/9695568-9695568 FN2136-S SNP A -> T AC=1;AN=168;BQB=0.0350949;DP=3282;DP4=1601,1636,16,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.57051e-12;MQSB=0.892148;RPB=0.369605;SGB=-303.73;VDB=0.415564;EFF=INTRON(MODIFIER||||149|LOC_Os08g15920|protein_coding|CODING|LOC_Os08g15920.1|3|1) FN3353-S.SNP.8:9695800 chr08:009695800 0 W/9695800-9695800 FN3353-S SNP C -> G AC=1;AN=184;BQB=0.764825;DP=3099;DP4=1306,1709,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.39763e-06;MQSB=0.652499;RPB=0.799769;SGB=44.2207;VDB=0.402979;EFF=UTR_5_PRIME(MODIFIER||752||149|LOC_Os08g15920|protein_coding|CODING|LOC_Os08g15920.1|4|1) FN3903-S.SNP.8:9698900 chr08:009698900 0 W/9698900-9698900 FN3903-S SNP C -> A AC=1;AN=158;BQB=0.993245;DP=2301;DP4=1024,1207,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.17569e-08;MQSB=0.974523;RPB=0.792605;SGB=55.806;VDB=0.838961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.8:9709534 chr08:009709534 0 W/9709534-9709534 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.958887;DP=2457;DP4=1226,1154,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.003663;MQB=0.00761107;MQSB=0.785223;RPB=0.937999;SGB=35.4339;VDB=0.165195;EFF=INTERGENIC(MODIFIER||||||||||1) FN-183.SNP.8:9711615 chr08:009711615 0 W/9711615-9711615 FN-183 Single Base Substitution A-G INTERGENIC HET SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN587-S.SNP.8:9713454 chr08:009713454 0 W/9713454-9713454 FN587-S Single Base Substitution A-G INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN4255-S.SNP.8:9714355 chr08:009714355 0 W/9714355-9714355 FN4255-S SNP A -> C AC=1;AN=170;BQB=0.99893;DP=2160;DP4=1087,973,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53475e-08;MQSB=0.991656;RPB=0.866949;SGB=41.7633;VDB=0.116663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.8:9718387 chr08:009718387 0 W/9718387-9718387 FN1586-S Single Base Substitution T-C INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN3796-S.SNP.8:9720949 chr08:009720949 0 W/9720949-9720949 FN3796-S SNP G -> A AC=1;AN=190;BQB=0.362963;DP=2762;DP4=1261,1430,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.20527e-07;MQSB=0.956905;RPB=0.99325;SGB=25.439;VDB=0.974255;EFF=INTERGENIC(MODIFIER||||||||||1) FN3920-S.SNP.8:9721548 chr08:009721548 0 W/9721548-9721548 FN3920-S SNP C -> T AC=1;AN=158;BQB=0.895936;DP=2553;DP4=1279,1175,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.60767e-07;MQSB=0.952244;RPB=0.965677;SGB=44.1818;VDB=0.879651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.8:9721989 chr08:009721989 0 W/9721989-9721989 FN2788-S SNP T -> A AC=1;AN=198;BQB=0.253617;DP=4187;DP4=1840,2161,10,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.13521e-12;MQSB=0.423451;RPB=0.99714;SGB=-9.07482;VDB=0.863377;EFF=INTERGENIC(MODIFIER||||||||||1) FN1613-S.SNP.8:9723265 chr08:009723265 0 W/9723265-9723265 FN1613-S Single Base Substitution T-A INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN1001-S.SNP.8:9723469 chr08:009723469 0 W/9723469-9723469 FN1001-S Single Base Substitution A-G INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN467-S.SNP.8:9723846 chr08:009723846 0 W/9723846-9723846 FN467-S Single Base Substitution C-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3913-S.SNP.8:9728489 chr08:009728489 0 W/9728489-9728489 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.962249;DP=2787;DP4=1343,1307,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22577e-09;MQSB=0.775936;RPB=0.416282;SGB=47.5512;VDB=0.271955;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.8:9728799 chr08:009728799 0 W/9728799-9728799 FN4304-S SNP C -> G AC=1;AN=170;BQB=0.994659;DP=2690;DP4=1366,1249,15,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.32017e-12;MQSB=0.986359;RPB=0.498922;SGB=87.856;VDB=0.788869;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.8:9728918 chr08:009728918 0 W/9728918-9728918 FN3692-S SNP A -> G AC=2;AN=190;BQB=0.830046;DP=2954;DP4=1521,1307,18,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68087e-19;MQSB=0.999916;RPB=0.718222;SGB=100.07;VDB=0.114894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.8:9730453 chr08:009730453 0 W/9730453-9730453 FN3436-S SNP C -> T AC=1;AN=184;BQB=0.999914;DP=2971;DP4=1689,1158,16,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93371e-15;MQSB=0.920018;RPB=0.884734;SGB=48.493;VDB=0.0273958;EFF=INTRON(MODIFIER||||84|LOC_Os08g15980|protein_coding|CODING|LOC_Os08g15980.1|1|1) FN2531-S.SNP.8:9747302 chr08:009747302 0 W/9747302-9747302 FN2531-S SNP C -> G AC=1;AN=198;BQB=0.864758;DP=4188;DP4=1944,1974,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.32229e-13;MQSB=0.981863;RPB=0.508987;SGB=55.2955;VDB=0.668555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V1889L|2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|4|1) FN-215.SNP.8:9747362 chr08:009747362 0 W/9747362-9747362 FN-215 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g16000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3506-S.SNP.8:9748925 chr08:009748925 0 W/9748925-9748925 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.922727;DP=2830;DP4=1378,1417,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.67651e-06;MQSB=0.998705;RPB=0.858887;SGB=21.8113;VDB=0.0991865;EFF=INTRON(MODIFIER||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|3|1) FN-307.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN-307 Single Base Substitution G-A INTRON HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2584-S.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.663795;DP=4197;DP4=1912,2026,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.43907e-18;MQSB=0.992208;RPB=0.909383;SGB=150.641;VDB=0.125494;EFF=SPLICE_SITE_REGION(LOW||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1),INTRON(MODIFIER||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1) FN3594-S.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN3594-S SNP G -> A AC=2;AN=188;BQB=0.999536;DP=2943;DP4=1356,1465,21,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.15786e-23;MQSB=0.985028;RPB=0.371541;SGB=185.278;VDB=0.765121;EFF=SPLICE_SITE_REGION(LOW||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1),INTRON(MODIFIER||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1) FN4038-S.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN4038-S SNP G -> A AC=2;AN=168;BQB=0.860055;DP=2965;DP4=1294,1495,28,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.92842e-30;MQSB=0.999921;RPB=0.999999;SGB=193.077;VDB=0.999182;EFF=SPLICE_SITE_REGION(LOW||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1),INTRON(MODIFIER||||2005|LOC_Os08g16000|protein_coding|CODING|LOC_Os08g16000.1|1|1) FN493-S.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN493-S Single Base Substitution G-A SPLICE_SITE_REGION HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN924-S.SNP.8:9753069 chr08:009753069 0 W/9753069-9753069 FN924-S Single Base Substitution G-A INTRON HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN427-S.SNP.8:9753767 chr08:009753767 0 W/9753767-9753767 FN427-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g16000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-232.SNP.8:9755523 chr08:009755523 0 W/9755523-9755523 FN-232 Single Base Substitution C-T INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2500.SNP.8:9757952 chr08:009757952 0 W/9757952-9757952 FN2500 SNP T -> A AC=1;AN=200;BQB=0.338702;DP=4353;DP4=2143,1857,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.26431e-08;MQSB=0.832325;RPB=0.841099;SGB=49.6594;VDB=0.470998;EFF=INTRON(MODIFIER||||291|LOC_Os08g16010|protein_coding|CODING|LOC_Os08g16010.1|1|1),INTRON(MODIFIER||||196|LOC_Os08g16010|protein_coding|CODING|LOC_Os08g16010.2|1|1) FN3750-S.SNP.8:9768954 chr08:009768954 0 W/9768954-9768954 FN3750-S SNP C -> A AC=1;AN=190;BQB=0.989211;DP=3018;DP4=1253,1623,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5076e-14;MQSB=0.999964;RPB=0.980982;SGB=117.403;VDB=0.518994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.8:9774790 chr08:009774790 0 W/9774790-9774790 FN3332-S SNP C -> A AC=2;AN=184;BQB=0.979794;DP=2213;DP4=1179,945,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.44922e-13;MQSB=0.766624;RPB=0.99296;SGB=98.4821;VDB=0.0211203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.8:9778609 chr08:009778609 0 W/9778609-9778609 FN2432 SNP C -> A AC=1;AN=200;BQB=0.845991;DP=4192;DP4=1911,2102,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.90708e-15;MQSB=0.388569;RPB=0.723321;SGB=76.3213;VDB=0.508274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.8:9778609 chr08:009778609 0 W/9778609-9778609 FN2549-S SNP C -> A AC=2;AN=198;BQB=0.421373;DP=3976;DP4=1802,1998,9,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.49369e-08;MQSB=0.698888;RPB=0.736443;SGB=-35.8307;VDB=0.264954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.8:9779166 chr08:009779166 0 W/9779166-9779166 FN2386 SNP T -> C AC=1;AN=192;BQB=0.787183;DP=4567;DP4=1944,2320,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58969e-09;MQSB=0.969574;RPB=0.698653;SGB=81.1609;VDB=0.824015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.8:9783618 chr08:009783618 0 W/9783618-9783618 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.947466;DP=4751;DP4=2142,2349,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6471e-16;MQSB=0.738442;RPB=0.97833;SGB=118.737;VDB=0.995728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R43Q|74|LOC_Os08g16040|protein_coding|CODING|LOC_Os08g16040.1|2|1) FN2408.SNP.8:9783895 chr08:009783895 0 W/9783895-9783895 FN2408 SNP A -> G AC=1;AN=200;BQB=0.890684;DP=4226;DP4=2104,1795,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28625e-07;MQSB=0.979779;RPB=0.800666;SGB=29.4541;VDB=0.739018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.8:9785003 chr08:009785003 0 W/9785003-9785003 FN2560-S SNP T -> C AC=2;AN=198;BQB=0.963737;DP=4559;DP4=2407,1907,7,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.21119e-13;MQSB=0.421642;RPB=0.865209;SGB=47.5102;VDB=0.167104;EFF=INTRON(MODIFIER||||273|LOC_Os08g16050|protein_coding|CODING|LOC_Os08g16050.1|1|1) FN2791-S.SNP.8:9788823 chr08:009788823 0 W/9788823-9788823 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.917922;DP=4419;DP4=2132,2029,18,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.01759e-12;MQSB=0.717562;RPB=0.727851;SGB=28.4908;VDB=0.449609;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.8:9793436 chr08:009793436 0 W/9793436-9793436 FN1731-S SNP G -> C AC=1;AN=188;BQB=0.117427;DP=3108;DP4=1424,1646,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00223115;MQSB=0.991198;RPB=0.802793;SGB=-2.17824;VDB=0.102415;EFF=INTRON(MODIFIER||||242|LOC_Os08g16060|protein_coding|CODING|LOC_Os08g16060.1|4|1) FN3429-S.SNP.8:9799322 chr08:009799322 0 W/9799322-9799322 FN3429-S SNP G -> T AC=1;AN=184;BQB=0.939185;DP=2926;DP4=1283,1532,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000341763;MQB=0.000229043;MQSB=0.908771;RPB=0.770466;SGB=18.1394;VDB=0.14548;EFF=INTERGENIC(MODIFIER||||||||||1) FN623-S.SNP.8:9799333 chr08:009799333 0 W/9799333-9799333 FN623-S Single Base Substitution T-G INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1452-S.SNP.8:9799919 chr08:009799919 0 W/9799919-9799919 FN1452-S Single Base Substitution G-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1186-S.SNP.8:9834809 chr08:009834809 0 W/9834809-9834809 FN1186-S Single Base Substitution A-G INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2575-S.SNP.8:9836022 chr08:009836022 0 W/9836022-9836022 FN2575-S SNP G -> A AC=1;AN=198;BQB=0.490268;DP=3637;DP4=1870,1507,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=1.6147e-06;MQSB=0.780131;RPB=0.868486;SGB=63.0809;VDB=0.989303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.8:9837386 chr08:009837386 0 W/9837386-9837386 FN2448 SNP G -> A AC=1;AN=200;BQB=0.989293;DP=4806;DP4=2193,2352,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.4616e-12;MQSB=0.989332;RPB=0.958757;SGB=81.8956;VDB=0.273216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.8:9842165 chr08:009842165 0 W/9842165-9842165 FN2407 SNP G -> A AC=1;AN=200;BQB=0.990224;DP=4444;DP4=2155,2109,7,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00382538;MQB=2.9216e-10;MQSB=1.30105e-07;RPB=0.939835;SGB=86.5007;VDB=0.795168;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R172H|990|LOC_Os08g16140|protein_coding|CODING|LOC_Os08g16140.1|2|1) FN2685-S.SNP.8:9851255 chr08:009851255 0 W/9851255-9851255 FN2685-S SNP A -> T AC=2;AN=200;BQB=0.644143;DP=4771;DP4=2365,2182,13,4;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0142528;MQB=0.402639;MQSB=0.000158754;RPB=0.214057;SGB=29.4849;VDB=0.397502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.8:9853793 chr08:009853793 0 W/9853793-9853793 FN1476-S Single Base Substitution C-T INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN895-S.SNP.8:9857480 chr08:009857480 0 W/9857480-9857480 FN895-S Single Base Substitution T-C INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2470.SNP.8:9872683 chr08:009872683 0 W/9872683-9872683 FN2470 SNP G -> A AC=1;AN=200;BQB=0.668362;DP=4217;DP4=1951,2025,7,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.95272e-06;MQSB=0.932963;RPB=0.697444;SGB=37.3004;VDB=0.726423;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D605N|1115|LOC_Os08g16190|protein_coding|CODING|LOC_Os08g16190.1|2|1) FN2708-S.SNP.8:9872965 chr08:009872965 0 W/9872965-9872965 FN2708-S SNP G -> T AC=1;AN=200;BQB=0.266392;DP=4539;DP4=2302,1996,11,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=6.99712e-06;MQSB=0.42659;RPB=0.413055;SGB=34.6953;VDB=0.509931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D699Y|1115|LOC_Os08g16190|protein_coding|CODING|LOC_Os08g16190.1|2|1) FN2116-S.SNP.8:9873997 chr08:009873997 0 W/9873997-9873997 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.448342;DP=2657;DP4=1450,1171,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00677456;MQB=0.00446817;MQSB=2.84675e-06;RPB=0.944381;SGB=48.4712;VDB=0.505203;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1043S|1115|LOC_Os08g16190|protein_coding|CODING|LOC_Os08g16190.1|2|1) FN2120-S.SNP.8:9884229 chr08:009884229 0 W/9884229-9884229 FN2120-S SNP A -> C AC=2;AN=168;BQB=0.984578;DP=3674;DP4=1831,1779,20,29;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.000544366;MQB=2.31862e-09;MQSB=0.00254867;RPB=0.992645;SGB=-55.442;VDB=0.380656;EFF=INTRON(MODIFIER||||252|LOC_Os08g16210|protein_coding|CODING|LOC_Os08g16210.1|2|1) FN798-S.SNP.8:9884426 chr08:009884426 0 W/9884426-9884426 FN798-S Single Base Substitution A-C INTRON HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-177.SNP.8:9884691 chr08:009884691 0 W/9884691-9884691 FN-177 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1097-S.SNP.8:9886161 chr08:009886161 0 W/9886161-9886161 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3820-S.SNP.8:9896806 chr08:009896806 0 W/9896806-9896806 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.949906;DP=2478;DP4=1275,1089,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000215067;MQSB=5.76221e-06;RPB=0.573277;SGB=18.3316;VDB=0.396463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.8:9897929 chr08:009897929 0 W/9897929-9897929 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.99977;DP=5006;DP4=2337,2381,4,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00339592;MQB=0.00103562;MQSB=0.996296;RPB=0.391092;SGB=25.849;VDB=0.532765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2114-S.SNP.8:9902398 chr08:009902398 0 W/9902398-9902398 FN2114-S SNP C -> T AC=1;AN=168;BQB=0.0437836;DP=3475;DP4=1730,1707,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.09257e-07;MQSB=0.922741;RPB=0.964682;SGB=-164.05;VDB=0.634966;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G669|1493|LOC_Os08g16240|protein_coding|CODING|LOC_Os08g16240.1|6|1) FN2560-S.SNP.8:9903127 chr08:009903127 0 W/9903127-9903127 FN2560-S SNP A -> G AC=2;AN=198;BQB=0.998677;DP=4187;DP4=1951,1996,7,9;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000955338;MQB=5.15178e-08;MQSB=0.81991;RPB=0.13007;SGB=47.3393;VDB=0.239887;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A451|1493|LOC_Os08g16240|protein_coding|CODING|LOC_Os08g16240.1|5|1) FN721-S.SNP.8:9905920 chr08:009905920 0 W/9905920-9905920 FN721-S Single Base Substitution T-A INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2686-S.SNP.8:9907337 chr08:009907337 0 W/9907337-9907337 FN2686-S SNP T -> C AC=2;AN=200;BQB=0.910815;DP=4786;DP4=2501,2048,17,13;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.78706e-06;MQSB=0.433316;RPB=0.55635;SGB=132.552;VDB=0.441535;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.8:9913734 chr08:009913734 0 W/9913734-9913734 FN4044-S SNP T -> A AC=1;AN=166;BQB=0.807406;DP=2515;DP4=1042,1344,4,6;HOB=7.25795e-05;ICB=0.000146033;MQ=47;MQ0F=0.000397614;MQB=0.00195724;MQSB=0.0143312;RPB=0.989447;SGB=38.8805;VDB=0.740471;EFF=START_LOST(HIGH|MISSENSE|aTg/aAg|M1K|295|LOC_Os08g16250|protein_coding|CODING|LOC_Os08g16250.1|1|1);LOF=(LOC_Os08g16250|LOC_Os08g16250|1|1.00) FN244-S.SNP.8:9931226 chr08:009931226 0 W/9931226-9931226 FN244-S Single Base Substitution C-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3398-S.SNP.8:9934134 chr08:009934134 0 W/9934134-9934134 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.952903;DP=2807;DP4=1506,1234,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000356252;MQB=0.00244815;MQSB=0.00518441;RPB=0.745583;SGB=39.699;VDB=0.553359;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L351F|628|LOC_Os08g16270|protein_coding|CODING|LOC_Os08g16270.1|3|1) FN1579-S.SNP.8:9937651 chr08:009937651 0 W/9937651-9937651 FN1579-S Single Base Substitution G-C INTRON HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN3839-S.SNP.8:9941035 chr08:009941035 0 W/9941035-9941035 FN3839-S SNP C -> T AC=1;AN=190;BQB=0.711442;DP=2847;DP4=1259,1507,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00842993;MQB=0.0022339;MQSB=0.294449;RPB=0.994878;SGB=53.8699;VDB=0.85243;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.8:9942655 chr08:009942655 0 W/9942655-9942655 FN358-S Single Base Substitution T-C INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1700-S.SNP.8:9944986 chr08:009944986 0 W/9944986-9944986 FN1700-S SNP C -> G AC=2;AN=188;BQB=0.0131555;DP=4609;DP4=2524,2024,28,26;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0622695;MQB=0.626703;MQSB=5.50685e-22;RPB=0.480693;SGB=-111.43;VDB=0.0492362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D481H|821|LOC_Os08g16290|protein_coding|CODING|LOC_Os08g16290.1|3|1) FN1460-S.SNP.8:9945948 chr08:009945948 0 W/9945948-9945948 FN1460-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g16290 retrotransposon protein, putative, unclassified, expressed SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2547-S.SNP.8:9948747 chr08:009948747 0 W/9948747-9948747 FN2547-S SNP G -> A AC=1;AN=198;BQB=0.942417;DP=3299;DP4=1687,1445,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=0.000447205;MQSB=0.969574;RPB=0.697683;SGB=18.5788;VDB=0.480966;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.8:9955422 chr08:009955422 0 W/9955422-9955422 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.483599;DP=4007;DP4=1713,2108,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.17543e-08;MQSB=0.850921;RPB=0.90818;SGB=9.48993;VDB=0.953736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.8:9955853 chr08:009955853 0 W/9955853-9955853 FN2200-S SNP A -> G AC=2;AN=190;BQB=0.726714;DP=1817;DP4=1588,142,11,1;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.000550358;MQB=0.00812478;MQSB=0.925421;RPB=0.963657;SGB=49.0954;VDB=0.173134;EFF=INTRON(MODIFIER||||49|LOC_Os08g16310|protein_coding|CODING|LOC_Os08g16310.1|1|1) FN3292-S.SNP.8:9960274 chr08:009960274 0 W/9960274-9960274 FN3292-S SNP C -> A AC=1;AN=184;BQB=0.998628;DP=2591;DP4=681,1833,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=2.98279e-05;MQSB=7.35312e-08;RPB=0.924388;SGB=53.2642;VDB=0.946176;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G68C|500|LOC_Os08g16320|protein_coding|CODING|LOC_Os08g16320.1|1|1) FN664-S.SNP.8:9962502 chr08:009962502 0 W/9962502-9962502 FN664-S Single Base Substitution T-A INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN2675-S.SNP.8:9968042 chr08:009968042 0 W/9968042-9968042 FN2675-S SNP G -> A AC=1;AN=200;BQB=0.606407;DP=4432;DP4=2201,2003,12,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00180505;MQB=6.59936e-05;MQSB=3.51129e-06;RPB=0.54555;SGB=54.6902;VDB=0.299395;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D497|798|LOC_Os08g16340|protein_coding|CODING|LOC_Os08g16340.1|4|1) FN836-S.SNP.8:9968153 chr08:009968153 0 W/9968153-9968153 FN836-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2595-S.SNP.8:9970683 chr08:009970683 0 W/9970683-9970683 FN2595-S SNP C -> A AC=1;AN=198;BQB=0.994649;DP=4158;DP4=2046,1878,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.36959e-08;MQSB=0.846575;RPB=0.49785;SGB=42.3199;VDB=0.964947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.8:9973579 chr08:009973579 0 W/9973579-9973579 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.490719;DP=4904;DP4=2346,2374,10,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.13638e-17;MQSB=0.915138;RPB=0.940046;SGB=87.1368;VDB=0.53382;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.8:9973580 chr08:009973580 0 W/9973580-9973580 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.947388;DP=4909;DP4=2334,2382,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51556e-16;MQSB=0.960826;RPB=0.910518;SGB=27.1468;VDB=0.524891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.8:9978269 chr08:009978269 0 W/9978269-9978269 FN1456-S Single Base Substitution G-A INTRON HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3707-S.SNP.8:9985678 chr08:009985678 0 W/9985678-9985678 FN3707-S SNP A -> G AC=1;AN=190;BQB=0.874327;DP=2180;DP4=932,1168,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.5498e-07;MQSB=0.994585;RPB=0.353201;SGB=44.5415;VDB=0.469204;EFF=INTERGENIC(MODIFIER||||||||||1) FN468-S.SNP.8:9987400 chr08:009987400 0 W/9987400-9987400 FN468-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g16370 transposon protein, putative, unclassified, expressed SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN972-S.SNP.8:9994096 chr08:009994096 0 W/9994096-9994096 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN3435-S.SNP.8:9995533 chr08:009995533 0 W/9995533-9995533 FN3435-S SNP C -> T AC=1;AN=184;BQB=0.966671;DP=2727;DP4=1518,1106,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000147395;MQSB=0.877238;RPB=0.94258;SGB=39.699;VDB=0.902899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.8:9995547 chr08:009995547 0 W/9995547-9995547 FN2620-S SNP G -> C AC=1;AN=186;BQB=0.535801;DP=4051;DP4=1906,1847,18,18;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=2.05382e-14;MQSB=0.466301;RPB=0.633333;SGB=119.242;VDB=0.12026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.8:10000723 chr08:010000723 0 W/10000723-10000723 FN3490-S SNP C -> A AC=2;AN=184;BQB=0.981526;DP=2252;DP4=846,1221,14,14;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0;MQB=2.0469e-05;MQSB=0.024401;RPB=0.735627;SGB=88.5747;VDB=0.199134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.8:10012170 chr08:010012170 0 W/10012170-10012170 FN1266-S Single Base Substitution T-A INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN4135-S.SNP.8:10012193 chr08:010012193 0 W/10012193-10012193 FN4135-S SNP C -> G AC=1;AN=182;BQB=0.937756;DP=2765;DP4=1359,1338,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.00361664;MQB=0.000322851;MQSB=1.36775e-06;RPB=0.547022;SGB=46.1603;VDB=0.257102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.8:10014304 chr08:010014304 0 W/10014304-10014304 FN3966-S SNP A -> C AC=2;AN=166;BQB=0.988248;DP=2014;DP4=915,1019,11,9;HOB=0.0238061;ICB=0.494049;MQ=42;MQ0F=0.00446872;MQB=0.00158538;MQSB=0.0131565;RPB=0.932986;SGB=58.7637;VDB=0.612056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K227Q|449|LOC_Os08g16380|protein_coding|CODING|LOC_Os08g16380.1|3|1) FN494-S.SNP.8:10019527 chr08:010019527 0 W/10019527-10019527 FN494-S Single Base Substitution T-G INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-95.SNP.8:10019628 chr08:010019628 0 W/10019628-10019628 FN-95 Single Base Substitution T-A INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN413-S.SNP.8:10039124 chr08:010039124 0 W/10039124-10039124 FN413-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g16420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3994-S.SNP.8:10075683 chr08:010075683 0 W/10075683-10075683 FN3994-S SNP T -> A AC=2;AN=168;BQB=0.999997;DP=2569;DP4=1286,1157,14,11;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.216037;MQB=0.856712;MQSB=0;RPB=0.781841;SGB=105.343;VDB=0.108583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.8:10078021 chr08:010078021 0 W/10078021-10078021 FN2300 SNP C -> T AC=1;AN=192;BQB=1;DP=4929;DP4=2504,2168,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.1143e-14;MQSB=0.944254;RPB=0.828389;SGB=78.9878;VDB=0.136742;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H200Y|995|LOC_Os08g16460|protein_coding|CODING|LOC_Os08g16460.1|1|1) FN2218-S.SNP.8:10084903 chr08:010084903 0 W/10084903-10084903 FN2218-S SNP C -> A AC=2;AN=190;BQB=0.993651;DP=5355;DP4=2716,2238,44,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.55234e-36;MQSB=0.99786;RPB=0.567856;SGB=18.349;VDB=0.388782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.8:10092636 chr08:010092636 0 W/10092636-10092636 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.876604;DP=5104;DP4=2418,2426,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.03699e-09;MQSB=0.0102654;RPB=0.770191;SGB=35.1887;VDB=0.0538026;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.8:10108881 chr08:010108881 0 W/10108881-10108881 FN845-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g16490 retrotransposon protein, putative, unclassified, expressed SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN1516-S.SNP.8:10116074 chr08:010116074 0 W/10116074-10116074 FN1516-S Single Base Substitution C-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2456.SNP.8:10148371 chr08:010148371 0 W/10148371-10148371 FN2456 SNP C -> A AC=1;AN=200;BQB=0.829715;DP=4526;DP4=2140,2141,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.0661e-11;MQSB=0.997764;RPB=0.999985;SGB=50.3263;VDB=0.896684;EFF=INTRON(MODIFIER||||77|LOC_Os08g16590|protein_coding|CODING|LOC_Os08g16590.1|1|1) FN1121-S.SNP.8:10149082 chr08:010149082 0 W/10149082-10149082 FN1121-S Single Base Substitution C-A INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1179-S.SNP.8:10154396 chr08:010154396 0 W/10154396-10154396 FN1179-S Single Base Substitution A-G INTRON HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3697-S.SNP.8:10157405 chr08:010157405 0 W/10157405-10157405 FN3697-S SNP C -> T AC=1;AN=190;BQB=0.752469;DP=2573;DP4=1285,1191,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=1.47779e-06;MQSB=1.54233e-05;RPB=0.563725;SGB=62.7569;VDB=0.143923;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.8:10157667 chr08:010157667 0 W/10157667-10157667 FN4114-S SNP T -> C AC=1;AN=182;BQB=0.693872;DP=3066;DP4=1556,1415,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.70778e-08;MQSB=0.814139;RPB=0.994757;SGB=62.1548;VDB=0.876161;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.8:10158455 chr08:010158455 0 W/10158455-10158455 FN-348 Single Base Substitution A-C INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN438-S.SNP.8:10166822 chr08:010166822 0 W/10166822-10166822 FN438-S Single Base Substitution A-G INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN1392-S.SNP.8:10171056 chr08:010171056 0 W/10171056-10171056 FN1392-S Single Base Substitution C-A INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN885-S.SNP.8:10173298 chr08:010173298 0 W/10173298-10173298 FN885-S Single Base Substitution T-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN1190-S.SNP.8:10194980 chr08:010194980 0 W/10194980-10194980 FN1190-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3492-S.SNP.8:10197079 chr08:010197079 0 W/10197079-10197079 FN3492-S SNP C -> T AC=2;AN=184;BQB=0.587794;DP=3048;DP4=1424,1499,20,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.04186e-21;MQSB=0.797736;RPB=0.872775;SGB=130.836;VDB=0.216265;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.8:10201988 chr08:010201988 0 W/10201988-10201988 FN551-S Single Base Substitution G-A INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3464-S.SNP.8:10206651 chr08:010206651 0 W/10206651-10206651 FN3464-S SNP G -> C AC=2;AN=184;BQB=0.999997;DP=3220;DP4=1650,1482,14,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.10457e-11;MQSB=0.478876;RPB=0.933163;SGB=84.9167;VDB=0.438188;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.8:10207433 chr08:010207433 0 W/10207433-10207433 FN1200-S Single Base Substitution A-G INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1292-S.SNP.8:10208467 chr08:010208467 0 W/10208467-10208467 FN1292-S Single Base Substitution A-C INTRON HOMO SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2266-S.SNP.8:10214435 chr08:010214435 0 W/10214435-10214435 FN2266-S SNP T -> A AC=1;AN=190;BQB=0.18882;DP=4177;DP4=2130,1839,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.5168e-05;MQSB=0.970961;RPB=0.116107;SGB=21.8853;VDB=0.472523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.8:10214436 chr08:010214436 0 W/10214436-10214436 FN2266-S SNP T -> A AC=1;AN=190;BQB=0.0333192;DP=4172;DP4=2127,1844,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57282e-05;MQSB=0.844067;RPB=0.37886;SGB=18.3316;VDB=0.50476;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.8:10224011 chr08:010224011 0 W/10224011-10224011 FN4164-S SNP C -> A AC=1;AN=170;BQB=0.870597;DP=2371;DP4=1014,1261,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.97984e-05;MQSB=0.000101825;RPB=0.96514;SGB=34.5445;VDB=0.690812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.8:10230804 chr08:010230804 0 W/10230804-10230804 FN1251-S Single Base Substitution G-A INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN1606-S.SNP.8:10236866 chr08:010236866 0 W/10236866-10236866 FN1606-S Single Base Substitution A-G INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1261-S.SNP.8:10240669 chr08:010240669 0 W/10240669-10240669 FN1261-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN505-S.SNP.8:10242302 chr08:010242302 0 W/10242302-10242302 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1563-S.SNP.8:10244432 chr08:010244432 0 W/10244432-10244432 FN1563-S Single Base Substitution G-A INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN-82.SNP.8:10262421 chr08:010262421 0 W/10262421-10262421 FN-82 Single Base Substitution T-C INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2297.SNP.8:10271681 chr08:010271681 0 W/10271681-10271681 FN2297 SNP G -> A AC=1;AN=192;BQB=0.784753;DP=5084;DP4=2432,2322,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.37606e-09;MQSB=0.824292;RPB=0.347626;SGB=8.91915;VDB=0.93656;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.8:10306835 chr08:010306835 0 W/10306835-10306835 FN417-S Single Base Substitution C-T INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2755-S.SNP.8:10312430 chr08:010312430 0 W/10312430-10312430 FN2755-S SNP A -> G AC=1;AN=200;BQB=0.994026;DP=3938;DP4=2288,1406,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.95569e-09;MQSB=6.11697e-06;RPB=0.944631;SGB=68.0801;VDB=0.335948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.8:10327758 chr08:010327758 0 W/10327758-10327758 FN2374 SNP G -> A AC=1;AN=192;BQB=0.991279;DP=4756;DP4=2135,2343,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61128e-10;MQSB=0.815113;RPB=0.99604;SGB=-11.9469;VDB=0.214125;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.8:10329067 chr08:010329067 0 W/10329067-10329067 FN_N1-130-1 Single Base Substitution A-G HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2588-S.SNP.8:10335649 chr08:010335649 0 W/10335649-10335649 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.496931;DP=4221;DP4=2381,1533,17,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.74887e-12;MQSB=0.840087;RPB=0.278728;SGB=-7.88458;VDB=0.737046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.8:10337039 chr08:010337039 0 W/10337039-10337039 FN1519-S Single Base Substitution C-T INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN-144.SNP.8:10338465 chr08:010338465 0 W/10338465-10338465 FN-144 Single Base Substitution T-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN682-S.SNP.8:10340509 chr08:010340509 0 W/10340509-10340509 FN682-S Single Base Substitution C-T INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2721-S.SNP.8:10342902 chr08:010342902 0 W/10342902-10342902 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.403306;DP=4831;DP4=2551,1976,10,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.55053e-06;MQSB=0.99184;RPB=0.928006;SGB=-0.141083;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.8:10343396 chr08:010343396 0 W/10343396-10343396 FN4064-S SNP C -> A AC=2;AN=168;BQB=0.803852;DP=2063;DP4=775,1175,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.83853e-10;MQSB=0.818842;RPB=0.582927;SGB=58.7637;VDB=0.930276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1515-S.SNP.8:10345365 chr08:010345365 0 W/10345365-10345365 FN1515-S Single Base Substitution C-A INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN3282-S.SNP.8:10345650 chr08:010345650 0 W/10345650-10345650 FN3282-S SNP C -> G AC=2;AN=184;BQB=0.934814;DP=2534;DP4=1166,1242,12,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.46347e-14;MQSB=0.468048;RPB=0.0190382;SGB=92.0965;VDB=0.0850488;EFF=INTERGENIC(MODIFIER||||||||||1) 705-1.SNP.8:10347968 chr08:010347968 0 W/10347968-10347968 705-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g16900 retrotransposon protein, putative, unclassified SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.8:10347968 chr08:010347968 0 W/10347968-10347968 705-2 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g16900 retrotransposon protein, putative, unclassified SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-7.SNP.8:10347968 chr08:010347968 0 W/10347968-10347968 705-7 Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os08g16900 retrotransposon protein, putative, unclassified SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN1026-S.SNP.8:10351905 chr08:010351905 0 W/10351905-10351905 FN1026-S Single Base Substitution T-C INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2774-S.SNP.8:10356689 chr08:010356689 0 W/10356689-10356689 FN2774-S SNP A -> G AC=1;AN=198;BQB=0.855537;DP=4122;DP4=2047,1865,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.96013e-10;MQSB=0.970581;RPB=0.87534;SGB=65.3149;VDB=0.505741;EFF=INTRON(MODIFIER||||332|LOC_Os08g16910|protein_coding|CODING|LOC_Os08g16910.1|2|1) FN4150-S.SNP.8:10359560 chr08:010359560 0 W/10359560-10359560 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.891552;DP=2869;DP4=1395,1377,8,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.2946e-13;MQSB=0.821394;RPB=0.432366;SGB=62.4192;VDB=0.00125304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.8:10361719 chr08:010361719 0 W/10361719-10361719 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.979196;DP=2425;DP4=1239,1109,20,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.51152e-17;MQSB=0.757533;RPB=0.928469;SGB=18.5195;VDB=0.362129;EFF=UTR_3_PRIME(MODIFIER||1920||88|LOC_Os08g16914|protein_coding|CODING|LOC_Os08g16914.1|4|1),UTR_3_PRIME(MODIFIER||1920||88|LOC_Os08g16914|protein_coding|CODING|LOC_Os08g16914.2|4|1) FN4149-S.SNP.8:10365879 chr08:010365879 0 W/10365879-10365879 FN4149-S SNP T -> C AC=1;AN=170;BQB=0.999928;DP=2641;DP4=1151,1375,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.79595e-09;MQSB=0.9859;RPB=0.0279388;SGB=45.206;VDB=0.0101279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T13A|211|LOC_Os08g16920|protein_coding|CODING|LOC_Os08g16920.1|1|1) FN1022-S.SNP.8:10370881 chr08:010370881 0 W/10370881-10370881 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN4101-S.SNP.8:10375232 chr08:010375232 0 W/10375232-10375232 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.955412;DP=2230;DP4=1232,870,11,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.1686e-09;MQSB=0.99207;RPB=0.512928;SGB=53.1331;VDB=0.323571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.8:10381045 chr08:010381045 0 W/10381045-10381045 FN1093-S Single Base Substitution G-A INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1639-S.SNP.8:10388715 chr08:010388715 0 W/10388715-10388715 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN2619-S.SNP.8:10391923 chr08:010391923 0 W/10391923-10391923 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.986801;DP=4559;DP4=2104,2189,17,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.21939e-20;MQSB=0.964178;RPB=0.0311922;SGB=86.437;VDB=0.226763;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.8:10397201 chr08:010397201 0 W/10397201-10397201 FN-101 Single Base Substitution G-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3810-S.SNP.8:10407652 chr08:010407652 0 W/10407652-10407652 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.931562;DP=2453;DP4=1160,1207,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.71693e-05;MQSB=0.975946;RPB=0.879497;SGB=35.4339;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.8:10407652 chr08:010407652 0 W/10407652-10407652 FN3924-S SNP G -> A AC=2;AN=158;BQB=0.379862;DP=2265;DP4=1035,1132,8,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.03107e-10;MQSB=0.998968;RPB=0.910721;SGB=71.1374;VDB=0.693673;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.8:10407652 chr08:010407652 0 W/10407652-10407652 FN701-S Single Base Substitution G-A INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-80.SNP.8:10413651 chr08:010413651 0 W/10413651-10413651 FN-80 Single Base Substitution A-T INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN1136-19-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN1136-19-S Single Base Substitution C-T INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1136-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN1136-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3855-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.985312;DP=2187;DP4=1170,916,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.43569e-08;MQSB=0.971434;RPB=0.999479;SGB=55.806;VDB=0.0756181;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN544-S Single Base Substitution C-T INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN705-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN705-S Single Base Substitution C-T INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN830-S.SNP.8:10418243 chr08:010418243 0 W/10418243-10418243 FN830-S Single Base Substitution C-T INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN4121-S.SNP.8:10419240 chr08:010419240 0 W/10419240-10419240 FN4121-S SNP C -> A AC=2;AN=182;BQB=0.801517;DP=2698;DP4=1418,1133,12,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.26995e-09;MQSB=0.959593;RPB=0.635264;SGB=63.7146;VDB=0.392253;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.8:10419855 chr08:010419855 0 W/10419855-10419855 FN857-S Single Base Substitution A-G INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN1555-S.SNP.8:10423765 chr08:010423765 0 W/10423765-10423765 FN1555-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN3947-S.SNP.8:10426774 chr08:010426774 0 W/10426774-10426774 FN3947-S SNP C -> A AC=2;AN=168;BQB=0.988736;DP=2648;DP4=1201,1316,26,10;HOB=0.0235261;ICB=0.494119;MQ=34;MQ0F=0.0981873;MQB=0.962389;MQSB=7.5449e-31;RPB=0.880657;SGB=113.657;VDB=0.0471608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R91L|274|LOC_Os08g17020|protein_coding|CODING|LOC_Os08g17020.1|3|1) FN3395-S.SNP.8:10430910 chr08:010430910 0 W/10430910-10430910 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.997133;DP=2811;DP4=1335,1392,13,19;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0163643;MQB=1.69257e-05;MQSB=0.303877;RPB=0.633392;SGB=139.178;VDB=0.237046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D407N|1033|LOC_Os08g17030|protein_coding|CODING|LOC_Os08g17030.1|1|1) FN-202.SNP.8:10435060 chr08:010435060 0 W/10435060-10435060 FN-202 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g17040 retrotransposon protein, putative, unclassified, expressed SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3900-S.SNP.8:10436641 chr08:010436641 0 W/10436641-10436641 FN3900-S SNP A -> T AC=1;AN=158;BQB=0.994525;DP=2581;DP4=1184,1283,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00154979;MQB=1.10041e-05;MQSB=0.0167552;RPB=0.167952;SGB=38.3284;VDB=0.812497;EFF=INTRON(MODIFIER||||2330|LOC_Os08g17040|protein_coding|CODING|LOC_Os08g17040.1|4|1) FN3467-S.SNP.8:10439266 chr08:010439266 0 W/10439266-10439266 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.994995;DP=3639;DP4=1607,1915,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20069e-09;MQSB=0.996109;RPB=0.595523;SGB=49.835;VDB=0.61942;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T1497I|2330|LOC_Os08g17040|protein_coding|CODING|LOC_Os08g17040.1|6|1) FN3855-S.SNP.8:10443577 chr08:010443577 0 W/10443577-10443577 FN3855-S SNP C -> G AC=1;AN=158;BQB=0.94146;DP=2514;DP4=1228,1217,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.78175e-05;MQSB=0.999881;RPB=0.963913;SGB=38.3284;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN-112.SNP.8:10461830 chr08:010461830 0 W/10461830-10461830 FN-112 Single Base Substitution G-T INTERGENIC HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2619-S.SNP.8:10466478 chr08:010466478 0 W/10466478-10466478 FN2619-S SNP C -> A AC=1;AN=198;BQB=0.941932;DP=3772;DP4=1871,1651,24,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.75164e-20;MQSB=0.982261;RPB=0.926627;SGB=1.04222;VDB=0.279963;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.8:10484590 chr08:010484590 0 W/10484590-10484590 FN-243 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g17130 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN468-S.SNP.8:10485726 chr08:010485726 0 W/10485726-10485726 FN468-S Single Base Substitution G-T STOP_GAINED HET LOC_Os08g17130 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. W598-2-1.SNP.8:10496420 chr08:010496420 0 W/10496420-10496420 W598-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2392.SNP.8:10497348 chr08:010497348 0 W/10497348-10497348 FN2392 SNP G -> C AC=1;AN=200;BQB=0.474854;DP=4149;DP4=1573,2205,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10901e-07;MQSB=0.573654;RPB=0.116055;SGB=-54.1261;VDB=0.307983;EFF=INTERGENIC(MODIFIER||||||||||1) FN1371-S.SNP.8:10503253 chr08:010503253 0 W/10503253-10503253 FN1371-S Single Base Substitution A-G INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN732-S.SNP.8:10505528 chr08:010505528 0 W/10505528-10505528 FN732-S Single Base Substitution G-C INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2240-S.SNP.8:10507575 chr08:010507575 0 W/10507575-10507575 FN2240-S SNP C -> T AC=1;AN=190;BQB=0.0392705;DP=5077;DP4=2216,2512,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00105164;MQSB=0.351184;RPB=0.887784;SGB=-33.6477;VDB=0.752318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.8:10509367 chr08:010509367 0 W/10509367-10509367 FN3651-S SNP T -> C AC=1;AN=190;BQB=0.640037;DP=2236;DP4=1043,1042,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.97796e-07;MQSB=0.554963;RPB=0.825728;SGB=18.552;VDB=0.835103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.8:10518505 chr08:010518505 0 W/10518505-10518505 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.960026;DP=3037;DP4=1501,1443,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.18766e-05;MQSB=0.944232;RPB=0.775751;SGB=21.6609;VDB=0.630032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T987I|1333|LOC_Os08g17170|protein_coding|CODING|LOC_Os08g17170.1|6|1) FN-94.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN-94 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1039-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN1039-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1193-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN1193-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1330-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN1330-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1460-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN1460-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2246-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN2246-S SNP C -> T AC=2;AN=190;BQB=0.0587809;DP=5077;DP4=2164,2585,17,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000196967;MQB=5.07456e-25;MQSB=0.798451;RPB=0.78297;SGB=142.717;VDB=0.239513;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V789|1333|LOC_Os08g17170|protein_coding|CODING|LOC_Os08g17170.1|6|1) FN3727-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN3727-S SNP C -> T AC=2;AN=190;BQB=0.862926;DP=2964;DP4=1350,1496,16,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86317e-17;MQSB=0.999966;RPB=0.735794;SGB=144.727;VDB=0.101479;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V789|1333|LOC_Os08g17170|protein_coding|CODING|LOC_Os08g17170.1|6|1) FN458-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN458-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN703-S.SNP.8:10519098 chr08:010519098 0 W/10519098-10519098 FN703-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN-55.SNP.8:10522794 chr08:010522794 0 W/10522794-10522794 FN-55 Single Base Substitution C-T INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN1626-S.SNP.8:10530577 chr08:010530577 0 W/10530577-10530577 FN1626-S SNP G -> C AC=1;AN=188;BQB=0.0174643;DP=3476;DP4=1427,2020,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37067e-09;MQSB=0.868085;RPB=0.300083;SGB=-39.1914;VDB=0.41996;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.8:10539419 chr08:010539419 0 W/10539419-10539419 FN4095-S SNP A -> T AC=2;AN=182;BQB=0.91039;DP=2259;DP4=1296,842,7,9;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=9.71817e-07;MQSB=8.33249e-05;RPB=0.150166;SGB=66.6657;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.8:10543168 chr08:010543168 0 W/10543168-10543168 FN-55 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g17210 transposon protein, putative, CACTA, En/Spm sub-class SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN4069-S.SNP.8:10553438 chr08:010553438 0 W/10553438-10553438 FN4069-S SNP G -> A AC=1;AN=182;BQB=0.418217;DP=2822;DP4=1337,1406,8,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00106308;MQB=1.4586e-09;MQSB=0.649224;RPB=0.361252;SGB=107.263;VDB=0.217665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3993-S.SNP.8:10553957 chr08:010553957 0 W/10553957-10553957 FN3993-S SNP C -> G AC=1;AN=168;BQB=0.999784;DP=2389;DP4=1080,1209,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.14417e-07;MQSB=0.926589;RPB=0.789267;SGB=56.6036;VDB=0.885039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.8:10555451 chr08:010555451 0 W/10555451-10555451 FN3306-S SNP C -> T AC=1;AN=184;BQB=0.851437;DP=3197;DP4=1321,1792,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58913e-08;MQSB=0.852928;RPB=0.453693;SGB=42.7914;VDB=0.379909;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D243|520|LOC_Os08g17240|protein_coding|CODING|LOC_Os08g17240.1|2|1) FN522-S.SNP.8:10556310 chr08:010556310 0 W/10556310-10556310 FN522-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g17240 retrotransposon, putative, centromere-specific SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN917-S.SNP.8:10558556 chr08:010558556 0 W/10558556-10558556 FN917-S Single Base Substitution G-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1109-S.SNP.8:10567532 chr08:010567532 0 W/10567532-10567532 FN1109-S Single Base Substitution G-T UTR_5_PRIME HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1277-S.SNP.8:10572877 chr08:010572877 0 W/10572877-10572877 FN1277-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g17294 PSF3 - Putative GINS complex subunit, expressed SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1277-S.SNP.8:10572878 chr08:010572878 0 W/10572878-10572878 FN1277-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g17294 PSF3 - Putative GINS complex subunit, expressed SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1221-S.SNP.8:10576860 chr08:010576860 0 W/10576860-10576860 FN1221-S Single Base Substitution T-A INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3879-S.SNP.8:10576860 chr08:010576860 0 W/10576860-10576860 FN3879-S SNP T -> A AC=1;AN=158;BQB=0.358203;DP=2402;DP4=1176,1073,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.41203e-12;MQSB=0.990273;RPB=0.776312;SGB=-15.0603;VDB=0.411901;EFF=INTRON(MODIFIER||||194|LOC_Os08g17294|protein_coding|CODING|LOC_Os08g17294.1|5|1),INTRON(MODIFIER||||194|LOC_Os08g17294|protein_coding|CODING|LOC_Os08g17294.2|5|1) FN711-S.SNP.8:10583423 chr08:010583423 0 W/10583423-10583423 FN711-S Single Base Substitution C-G INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2579-S.SNP.8:10588360 chr08:010588360 0 W/10588360-10588360 FN2579-S SNP C -> G AC=1;AN=198;BQB=0.81893;DP=3900;DP4=1573,2029,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.90772e-13;MQSB=0.844626;RPB=0.955299;SGB=109.285;VDB=0.880201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.8:10589513 chr08:010589513 0 W/10589513-10589513 FN2577-S SNP T -> G AC=1;AN=198;BQB=0.473561;DP=4141;DP4=2108,1842,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.000615676;MQSB=0.904043;RPB=0.338224;SGB=29.3637;VDB=0.0516872;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.8:10592183 chr08:010592183 0 W/10592183-10592183 FN_N2-29a-1 Single Base Substitution A-C HET LOC_Os08g17320 protein kinase family protein, putative, expressed SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2296.SNP.8:10599936 chr08:010599936 0 W/10599936-10599936 FN2296 SNP G -> T AC=1;AN=192;BQB=0.901527;DP=4969;DP4=2304,2274,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.12915e-15;MQSB=0.950859;RPB=0.367436;SGB=103.983;VDB=0.176715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:10613327 chr08:010613327 0 W/10613327-10613327 FN3696-S SNP G -> A AC=1;AN=190;BQB=0.997386;DP=2393;DP4=1075,1194,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.45981e-05;MQSB=0.999107;RPB=0.958625;SGB=21.8853;VDB=0.190636;EFF=INTRON(MODIFIER||||111|LOC_Os08g17350|protein_coding|CODING|LOC_Os08g17350.1|1|1) FN4247-S.SNP.8:10620777 chr08:010620777 0 W/10620777-10620777 FN4247-S SNP C -> A AC=1;AN=170;BQB=0.810474;DP=2236;DP4=1191,974,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.14709e-07;MQSB=0.768558;RPB=0.828016;SGB=43.4296;VDB=0.971225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.8:10627985 chr08:010627985 0 W/10627985-10627985 FN2780-S SNP T -> C AC=1;AN=198;BQB=0.700191;DP=4358;DP4=2064,2021,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.86603e-09;MQSB=0.976684;RPB=0.688007;SGB=63.3342;VDB=0.156172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.8:10631673 chr08:010631673 0 W/10631673-10631673 FN1196-S Single Base Substitution A-T SPLICE_SITE_ACCEPTOR HET LOC_Os08g17390 expressed protein SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN-218.SNP.8:10633666 chr08:010633666 0 W/10633666-10633666 FN-218 Single Base Substitution T-A UTR_3_PRIME HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2664-S.SNP.8:10638570 chr08:010638570 0 W/10638570-10638570 FN2664-S SNP A -> T AC=1;AN=200;BQB=0.827283;DP=4258;DP4=1575,1504,13,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=8.85752e-16;MQSB=0.0218463;RPB=0.95518;SGB=-102.464;VDB=0.0646668;EFF=INTRON(MODIFIER||||550|LOC_Os08g17400|protein_coding|CODING|LOC_Os08g17400.1|1|1) FN2295.SNP.8:10641680 chr08:010641680 0 W/10641680-10641680 FN2295 SNP C -> T AC=1;AN=192;BQB=0.517882;DP=5474;DP4=2476,2531,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.7006e-20;MQSB=0.683778;RPB=0.116431;SGB=-42.7339;VDB=0.39097;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.8:10652256 chr08:010652256 0 W/10652256-10652256 FN1381-S Single Base Substitution C-T INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN3432-S.SNP.8:10654180 chr08:010654180 0 W/10654180-10654180 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.981468;DP=2521;DP4=1187,1261,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.47827e-08;MQSB=0.992962;RPB=0.586124;SGB=20.7533;VDB=0.982198;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.8:10660800 chr08:010660800 0 W/10660800-10660800 FN-13 Single Base Substitution C-T INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1764-S.SNP.8:10660818 chr08:010660818 0 W/10660818-10660818 FN1764-S SNP C -> T AC=1;AN=188;BQB=0.0906167;DP=4487;DP4=1936,2491,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.28885e-05;MQSB=0.997796;RPB=0.204969;SGB=-114.435;VDB=0.138017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.8:10662165 chr08:010662165 0 W/10662165-10662165 FN3807-S SNP A -> C AC=1;AN=190;BQB=0.957849;DP=2739;DP4=1385,1241,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.93007e-07;MQSB=0.847907;RPB=0.86398;SGB=39.9877;VDB=0.0478483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.8:10662316 chr08:010662316 0 W/10662316-10662316 FN1439-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN771-S.SNP.8:10670380 chr08:010670380 0 W/10670380-10670380 FN771-S Single Base Substitution C-G INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1315-S.SNP.8:10670771 chr08:010670771 0 W/10670771-10670771 FN1315-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN4020-S.SNP.8:10676280 chr08:010676280 0 W/10676280-10676280 FN4020-S SNP T -> A AC=1;AN=168;BQB=0.754829;DP=2265;DP4=1336,824,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.013245;MQB=3.71455e-06;MQSB=0.369544;RPB=0.768041;SGB=11.3448;VDB=0.887823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agA|S885R|1190|LOC_Os08g17420|protein_coding|CODING|LOC_Os08g17420.1|5|1) FN_546-3-1.SNP.8:10683643 chr08:010683643 0 W/10683643-10683643 FN_546-3-1 Single Base Substitution G-A HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN579-S.SNP.8:10692829 chr08:010692829 0 W/10692829-10692829 FN579-S Single Base Substitution G-A INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1379-S.SNP.8:10696815 chr08:010696815 0 W/10696815-10696815 FN1379-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g17460 retrotransposon protein, putative, unclassified SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1379-S.SNP.8:10696816 chr08:010696816 0 W/10696816-10696816 FN1379-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g17460 retrotransposon protein, putative, unclassified SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2183-S.SNP.8:10701677 chr08:010701677 0 W/10701677-10701677 FN2183-S SNP C -> T AC=1;AN=190;BQB=0.942488;DP=4490;DP4=1835,2229,7,22;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.28067e-14;MQSB=3.70904e-05;RPB=0.986945;SGB=126.511;VDB=0.360136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.8:10708962 chr08:010708962 0 W/10708962-10708962 FN2480 SNP A -> G AC=1;AN=200;BQB=0.734233;DP=4769;DP4=2283,2230,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.5068e-06;MQSB=0.987371;RPB=0.989915;SGB=49.6594;VDB=0.83933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q1419R|1547|LOC_Os08g17480|protein_coding|CODING|LOC_Os08g17480.1|10|1) FN-106.SNP.8:10710137 chr08:010710137 0 W/10710137-10710137 FN-106 Single Base Substitution A-T INTERGENIC HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3639-S.SNP.8:10714669 chr08:010714669 0 W/10714669-10714669 FN3639-S SNP G -> A AC=2;AN=190;BQB=0.767106;DP=3320;DP4=1542,1633,14,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00240964;MQB=1.15665e-12;MQSB=4.52004e-08;RPB=0.869178;SGB=144.727;VDB=0.541378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2115-S.SNP.8:10720840 chr08:010720840 0 W/10720840-10720840 FN2115-S SNP G -> A AC=1;AN=168;BQB=0.997856;DP=2431;DP4=1135,1260,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.88328e-07;MQSB=0.881348;RPB=0.822749;SGB=38.1788;VDB=0.404278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.8:10725783 chr08:010725783 0 W/10725783-10725783 FN2684-S SNP G -> T AC=1;AN=200;BQB=0.828498;DP=4636;DP4=2305,2089,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16442e-12;MQSB=0.742297;RPB=0.119794;SGB=37.3004;VDB=0.465908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T216K|222|LOC_Os08g17520|protein_coding|CODING|LOC_Os08g17520.1|2|1) FN3914-S.SNP.8:10728005 chr08:010728005 0 W/10728005-10728005 FN3914-S SNP G -> C AC=1;AN=158;BQB=0.552725;DP=2771;DP4=1513,1107,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.47509e-08;MQSB=0.266874;RPB=0.661427;SGB=40.8124;VDB=0.610049;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.8:10732913 chr08:010732913 0 W/10732913-10732913 FN517-S Single Base Substitution C-T INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2789-S.SNP.8:10734443 chr08:010734443 0 W/10734443-10734443 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.746067;DP=4348;DP4=2170,1948,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00229991;MQB=0.0308995;MQSB=0.547345;RPB=0.66225;SGB=16.3688;VDB=0.0768001;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.8:10737103 chr08:010737103 0 W/10737103-10737103 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.925142;DP=3087;DP4=1537,1440,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.39512e-10;MQSB=0.924905;RPB=0.620358;SGB=50.3161;VDB=0.75716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.8:10739290 chr08:010739290 0 W/10739290-10739290 FN2491 SNP A -> T AC=1;AN=200;BQB=0.75707;DP=4935;DP4=2363,2259,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22087e-07;MQSB=0.896656;RPB=0.806583;SGB=36.6644;VDB=0.297237;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.8:10741159 chr08:010741159 0 W/10741159-10741159 FN-65 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g17550 retrotransposon protein, putative, unclassified, expressed SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3976-S.SNP.8:10750152 chr08:010750152 0 W/10750152-10750152 FN3976-S SNP T -> A AC=1;AN=168;BQB=0.969002;DP=2566;DP4=1296,1026,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=4.73121e-13;MQSB=0.105682;RPB=0.633782;SGB=15.6372;VDB=0.197285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.8:10751531 chr08:010751531 0 W/10751531-10751531 FN1634-S Single Base Substitution T-G INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN414-S.SNP.8:10756048 chr08:010756048 0 W/10756048-10756048 FN414-S Single Base Substitution C-G INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN3305-S.SNP.8:10756161 chr08:010756161 0 W/10756161-10756161 FN3305-S SNP T -> C AC=1;AN=184;BQB=0.563383;DP=2768;DP4=1308,1079,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.64466e-07;MQSB=0.847975;RPB=0.92881;SGB=-57.7467;VDB=0.0579805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.8:10757764 chr08:010757764 0 W/10757764-10757764 FN1624-S Single Base Substitution G-A INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN4272-S.SNP.8:10759902 chr08:010759902 0 W/10759902-10759902 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.685883;DP=2593;DP4=1523,960,13,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000771307;MQB=7.52183e-09;MQSB=0.243132;RPB=0.545645;SGB=87.856;VDB=0.605794;EFF=UTR_5_PRIME(MODIFIER||1109||232|LOC_Os08g17600|protein_coding|CODING|LOC_Os08g17600.2|2|1),UTR_5_PRIME(MODIFIER||1109||232|LOC_Os08g17600|protein_coding|CODING|LOC_Os08g17600.1|2|1) FN2081-S.SNP.8:10766925 chr08:010766925 0 W/10766925-10766925 FN2081-S SNP C -> T AC=1;AN=168;BQB=0.000590059;DP=1692;DP4=834,772,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000514665;MQSB=0.993964;RPB=0.962857;SGB=1.32907;VDB=0.522795;EFF=INTERGENIC(MODIFIER||||||||||1) FN-37.SNP.8:10770418 chr08:010770418 0 W/10770418-10770418 FN-37 Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os08g17610 expressed protein SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1022-S.SNP.8:10774490 chr08:010774490 0 W/10774490-10774490 FN1022-S Single Base Substitution G-T INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3343-S.SNP.8:10775171 chr08:010775171 0 W/10775171-10775171 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.596005;DP=2687;DP4=1349,1174,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0227019;MQB=0.0867335;MQSB=0.409424;RPB=0.690565;SGB=18.2315;VDB=0.754116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.8:10776073 chr08:010776073 0 W/10776073-10776073 FN3482-S SNP A -> G AC=1;AN=184;BQB=0.999668;DP=2916;DP4=1411,1416,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.55018e-10;MQSB=0.947543;RPB=0.995767;SGB=75.8731;VDB=0.169627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.8:10777423 chr08:010777423 0 W/10777423-10777423 FN2681-S SNP C -> G AC=1;AN=200;BQB=0.354181;DP=4162;DP4=2167,1386,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000240269;MQB=6.11813e-14;MQSB=0.888583;RPB=0.634519;SGB=76.3213;VDB=0.233065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.8:10779077 chr08:010779077 0 W/10779077-10779077 FN1739-S SNP G -> A AC=1;AN=188;BQB=0.193486;DP=1776;DP4=768,979,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000534567;MQSB=0.419824;RPB=0.999989;SGB=-2.17824;VDB=0.769297;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.8:10787651 chr08:010787651 0 W/10787651-10787651 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.974745;DP=2501;DP4=1216,1218,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.04971e-08;MQSB=0.977072;RPB=0.88533;SGB=47.8722;VDB=0.258238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.8:10793821 chr08:010793821 0 W/10793821-10793821 FN1439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2589-S.SNP.8:10806723 chr08:010806723 0 W/10806723-10806723 FN2589-S SNP G -> A AC=2;AN=198;BQB=0.999064;DP=3866;DP4=1771,1868,18,6;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.27095e-10;MQSB=0.990079;RPB=0.662099;SGB=104.69;VDB=0.181959;EFF=INTRON(MODIFIER||||222|LOC_Os08g17670|protein_coding|CODING|LOC_Os08g17670.1|1|1) FN3430-S.SNP.8:10806723 chr08:010806723 0 W/10806723-10806723 FN3430-S SNP G -> A AC=2;AN=184;BQB=0.99903;DP=3562;DP4=1621,1821,13,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.12956e-20;MQSB=0.913668;RPB=0.966989;SGB=157.265;VDB=0.142071;EFF=INTRON(MODIFIER||||222|LOC_Os08g17670|protein_coding|CODING|LOC_Os08g17670.1|1|1) FN3286-S.SNP.8:10814592 chr08:010814592 0 W/10814592-10814592 FN3286-S SNP C -> T AC=2;AN=184;BQB=0.983558;DP=3242;DP4=1727,1380,18,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.61612e-17;MQSB=0.960365;RPB=0.965835;SGB=99.14;VDB=0.849197;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.8:10814592 chr08:010814592 0 W/10814592-10814592 FN559-S Single Base Substitution C-T INTERGENIC HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN-305.SNP.8:10814645 chr08:010814645 0 W/10814645-10814645 FN-305 Single Base Substitution C-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3757-S.SNP.8:10822509 chr08:010822509 0 W/10822509-10822509 FN3757-S SNP C -> A AC=2;AN=190;BQB=0.284271;DP=2582;DP4=1446,1034,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.71853e-15;MQSB=0.730983;RPB=0.998222;SGB=144.727;VDB=0.67118;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.8:10825215 chr08:010825215 0 W/10825215-10825215 FN1619-S Single Base Substitution T-C INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1268-S.SNP.8:10827359 chr08:010827359 0 W/10827359-10827359 FN1268-S Single Base Substitution T-C INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1268-S.SNP.8:10827407 chr08:010827407 0 W/10827407-10827407 FN1268-S Single Base Substitution C-G INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN1268-S.SNP.8:10827446 chr08:010827446 0 W/10827446-10827446 FN1268-S Single Base Substitution T-C INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2563-S.SNP.8:10831217 chr08:010831217 0 W/10831217-10831217 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.909509;DP=3940;DP4=2015,1683,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000761421;MQB=0.00224559;MQSB=0.954575;RPB=0.984272;SGB=25.7687;VDB=0.512083;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.8:10831230 chr08:010831230 0 W/10831230-10831230 FN983-S Single Base Substitution C-T INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3757-S.SNP.8:10831937 chr08:010831937 0 W/10831937-10831937 FN3757-S SNP C -> T AC=2;AN=190;BQB=0.765272;DP=2710;DP4=1372,1228,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000369004;MQB=5.11083e-15;MQSB=0.214561;RPB=0.726859;SGB=100.07;VDB=0.979837;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:10834489 chr08:010834489 0 W/10834489-10834489 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.947807;DP=2904;DP4=1420,1351,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0179063;MQB=0.00872204;MQSB=0.816947;RPB=0.953476;SGB=38.4058;VDB=0.868229;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S370|1112|LOC_Os08g17700|protein_coding|CODING|LOC_Os08g17700.1|1|1) FN4049-S.SNP.8:10837603 chr08:010837603 0 W/10837603-10837603 FN4049-S SNP C -> T AC=1;AN=168;BQB=0.714703;DP=2648;DP4=1321,1251,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000197261;MQSB=0.996389;RPB=0.757888;SGB=24.4556;VDB=0.487917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.8:10840283 chr08:010840283 0 W/10840283-10840283 FN1302-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN932-S.SNP.8:10846740 chr08:010846740 0 W/10846740-10846740 FN932-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g17730 transposon protein, putative, CACTA, En/Spm sub-class SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2307.SNP.8:10854359 chr08:010854359 0 W/10854359-10854359 FN2307 SNP C -> T AC=1;AN=192;BQB=0.943538;DP=3377;DP4=1856,1311,18,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=9.64456e-10;MQSB=0.000200301;RPB=0.719825;SGB=103.983;VDB=0.0155431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.8:10855998 chr08:010855998 0 W/10855998-10855998 FN2377 SNP A -> G AC=1;AN=192;BQB=0.203779;DP=4859;DP4=2587,1944,11,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.57735e-07;MQSB=0.909627;RPB=0.998423;SGB=-14.7687;VDB=0.307546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.8:10856226 chr08:010856226 0 W/10856226-10856226 FN2179-S SNP C -> A AC=1;AN=168;BQB=0.00780115;DP=2778;DP4=1646,1092,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0836e-05;MQSB=0.89477;RPB=0.319856;SGB=-136.635;VDB=0.161238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.8:10859833 chr08:010859833 0 W/10859833-10859833 FN3478-S SNP C -> T AC=1;AN=184;BQB=0.893188;DP=2622;DP4=1317,1227,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00114416;MQB=5.42285e-10;MQSB=5.91497e-05;RPB=0.128952;SGB=63.9222;VDB=0.872775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1347R|1387|LOC_Os08g17750|protein_coding|CODING|LOC_Os08g17750.1|6|1) FN2102-S.SNP.8:10864980 chr08:010864980 0 W/10864980-10864980 FN2102-S SNP A -> C AC=1;AN=168;BQB=0.134596;DP=2974;DP4=1725,1194,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00302623;MQB=5.30809e-06;MQSB=0.206736;RPB=0.954036;SGB=-36.659;VDB=0.990752;EFF=INTRON(MODIFIER||||1387|LOC_Os08g17750|protein_coding|CODING|LOC_Os08g17750.1|1|1) FN2102-S.SNP.8:10864981 chr08:010864981 0 W/10864981-10864981 FN2102-S SNP C -> G AC=1;AN=168;BQB=0.539301;DP=2986;DP4=1742,1200,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00301407;MQB=1.45482e-06;MQSB=0.216734;RPB=0.708343;SGB=17.3231;VDB=0.938913;EFF=INTRON(MODIFIER||||1387|LOC_Os08g17750|protein_coding|CODING|LOC_Os08g17750.1|1|1) FN2373.SNP.8:10865340 chr08:010865340 0 W/10865340-10865340 FN2373 SNP C -> A AC=1;AN=192;BQB=0.247704;DP=4809;DP4=2278,2223,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.000415887;MQB=1.61151e-10;MQSB=0.519773;RPB=0.867249;SGB=-64.5008;VDB=0.323957;EFF=INTERGENIC(MODIFIER||||||||||1) FN536-S.SNP.8:10865427 chr08:010865427 0 W/10865427-10865427 FN536-S Single Base Substitution T-G INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN1679-S.SNP.8:10866412 chr08:010866412 0 W/10866412-10866412 FN1679-S SNP T -> C AC=1;AN=188;BQB=0.0513036;DP=4092;DP4=2210,1840,21,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.16537e-17;MQSB=0.972327;RPB=0.166905;SGB=-120.834;VDB=0.0845072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.8:10866959 chr08:010866959 0 W/10866959-10866959 FN1557-S Single Base Substitution A-G INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2175-S.SNP.8:10870979 chr08:010870979 0 W/10870979-10870979 FN2175-S SNP A -> C AC=2;AN=168;BQB=0.248849;DP=3169;DP4=1814,1306,25,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.54088e-19;MQSB=0.962648;RPB=0.560031;SGB=-88.4675;VDB=0.191821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.8:10874725 chr08:010874725 0 W/10874725-10874725 FN2645-S SNP A -> G AC=1;AN=200;BQB=0.953801;DP=4726;DP4=2150,2248,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.4583e-13;MQSB=0.918904;RPB=0.38805;SGB=37.3004;VDB=0.891617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.8:10879557 chr08:010879557 0 W/10879557-10879557 FN3790-S SNP A -> G AC=2;AN=190;BQB=0.99994;DP=2541;DP4=1071,1359,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.37759e-15;MQSB=0.731293;RPB=0.970866;SGB=135.619;VDB=0.957151;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.8:10880396 chr08:010880396 0 W/10880396-10880396 FN561-S Single Base Substitution C-T INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN2157-S.SNP.8:10882041 chr08:010882041 0 W/10882041-10882041 FN2157-S SNP T -> C AC=1;AN=168;BQB=0.159849;DP=2949;DP4=1185,1728,4,19;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00101729;MQB=5.30564e-05;MQSB=0.0470189;RPB=0.344786;SGB=-40.6433;VDB=0.683058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:10882539 chr08:010882539 0 W/10882539-10882539 FN3382-S SNP A -> T AC=1;AN=184;BQB=0.576185;DP=2249;DP4=865,1170,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.42913e-07;MQSB=9.68094e-06;RPB=0.822145;SGB=23.2751;VDB=0.600856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:10882540 chr08:010882540 0 W/10882540-10882540 FN3382-S SNP A -> T AC=1;AN=184;BQB=0.98446;DP=2250;DP4=755,1206,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.41191e-06;MQSB=1.97878e-05;RPB=0.751878;SGB=5.28054;VDB=0.223321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.8:10885492 chr08:010885492 0 W/10885492-10885492 FN1313-S Single Base Substitution C-T INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2235-S.SNP.8:10887487 chr08:010887487 0 W/10887487-10887487 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.39506;DP=5139;DP4=2283,2349,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.82449e-16;MQSB=0.92325;RPB=0.920883;SGB=-42.5702;VDB=0.743103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.8:10887889 chr08:010887889 0 W/10887889-10887889 FN3311-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN2124-S.SNP.8:10897774 chr08:010897774 0 W/10897774-10897774 FN2124-S SNP G -> C AC=1;AN=168;BQB=0.0641589;DP=3603;DP4=1754,1810,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000225899;MQSB=0.994728;RPB=0.38747;SGB=-16.2342;VDB=0.417468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.8:10898418 chr08:010898418 0 W/10898418-10898418 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2199-S.SNP.8:10902350 chr08:010902350 0 W/10902350-10902350 FN2199-S SNP C -> A AC=1;AN=190;BQB=0.0386098;DP=4771;DP4=2334,2053,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.71442e-12;MQSB=0.952498;RPB=0.114182;SGB=22.7576;VDB=0.979572;EFF=INTRON(MODIFIER||||622|LOC_Os08g17784|protein_coding|CODING|LOC_Os08g17784.1|3|1),INTRON(MODIFIER||||622|LOC_Os08g17784|protein_coding|CODING|LOC_Os08g17784.2|3|1) FN2300.SNP.8:10914721 chr08:010914721 0 W/10914721-10914721 FN2300 SNP C -> G AC=1;AN=192;BQB=0.992206;DP=5023;DP4=2458,2320,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=6.44817e-07;MQSB=0.475405;RPB=0.82075;SGB=90.2896;VDB=0.951376;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.8:10921244 chr08:010921244 0 W/10921244-10921244 FN4090-S SNP C -> T AC=1;AN=182;BQB=0.946481;DP=2310;DP4=1320,934,11,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.9863e-09;MQSB=0.245249;RPB=0.140163;SGB=46.1603;VDB=0.715153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.8:10921252 chr08:010921252 0 W/10921252-10921252 FN1745-S SNP C -> G AC=1;AN=188;BQB=0.38421;DP=2181;DP4=776,1370,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.81584e-10;MQSB=0.424761;RPB=0.211078;SGB=67.1521;VDB=0.0394076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.8:10922145 chr08:010922145 0 W/10922145-10922145 FN-235 Single Base Substitution A-G INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2471.SNP.8:10922349 chr08:010922349 0 W/10922349-10922349 FN2471 SNP A -> T AC=2;AN=200;BQB=0.986073;DP=3847;DP4=1586,1879,19,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.47222e-18;MQSB=0.156047;RPB=0.988316;SGB=144.819;VDB=0.733872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.8:10930226 chr08:010930226 0 W/10930226-10930226 FN3798-S SNP T -> A AC=1;AN=190;BQB=0.937007;DP=2468;DP4=1204,1168,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.23089e-08;MQSB=0.983798;RPB=0.434744;SGB=49.0954;VDB=0.0576114;EFF=INTRON(MODIFIER||||893|LOC_Os08g17820|protein_coding|CODING|LOC_Os08g17820.1|11|1),INTRON(MODIFIER||||893|LOC_Os08g17820|protein_coding|CODING|LOC_Os08g17820.2|11|1) FN-82.SNP.8:10943844 chr08:010943844 0 W/10943844-10943844 FN-82 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g17830 transposon protein, putative, unclassified, expressed SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1232-S.SNP.8:10945256 chr08:010945256 0 W/10945256-10945256 FN1232-S Single Base Substitution C-A INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2498.SNP.8:10945899 chr08:010945899 0 W/10945899-10945899 FN2498 SNP G -> A AC=1;AN=200;BQB=0.232862;DP=4532;DP4=1982,2269,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.12802e-09;MQSB=0.99991;RPB=0.978949;SGB=11.0951;VDB=0.311257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.8:10947400 chr08:010947400 0 W/10947400-10947400 FN1504-S Single Base Substitution C-T INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN2178-S.SNP.8:10948993 chr08:010948993 0 W/10948993-10948993 FN2178-S SNP A -> T AC=2;AN=168;BQB=0.0817517;DP=2460;DP4=889,1484,10,29;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.14945e-10;MQSB=0.603218;RPB=0.29716;SGB=167.374;VDB=0.897028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.8:10953767 chr08:010953767 0 W/10953767-10953767 FN2709-S SNP T -> C AC=1;AN=200;BQB=0.563414;DP=5156;DP4=2278,2639,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29234e-13;MQSB=0.996222;RPB=0.659987;SGB=20.7261;VDB=0.426649;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I57|309|LOC_Os08g17860|protein_coding|CODING|LOC_Os08g17860.1|2|1) FN2731-S.SNP.8:10954136 chr08:010954136 0 W/10954136-10954136 FN2731-S SNP T -> C AC=1;AN=200;BQB=0.997183;DP=5069;DP4=2344,2505,8,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69485e-16;MQSB=0.957274;RPB=0.858102;SGB=58.1418;VDB=0.180817;EFF=INTRON(MODIFIER||||309|LOC_Os08g17860|protein_coding|CODING|LOC_Os08g17860.1|2|1) FN323-S.SNP.8:10954610 chr08:010954610 0 W/10954610-10954610 FN323-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g17860 transposon protein, putative, Pong sub-class, expressed SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3829-S.SNP.8:10956165 chr08:010956165 0 W/10956165-10956165 FN3829-S SNP C -> A AC=1;AN=190;BQB=0.937238;DP=2587;DP4=1292,1197,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.63967e-08;MQSB=0.995901;RPB=0.992437;SGB=32.5467;VDB=0.559446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.8:10958077 chr08:010958077 0 W/10958077-10958077 FN3716-S SNP G -> A AC=2;AN=190;BQB=0.994212;DP=2548;DP4=1294,1147,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.20484e-12;MQSB=0.953191;RPB=0.884372;SGB=90.0802;VDB=0.235811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.8:10958432 chr08:010958432 0 W/10958432-10958432 FN3385-S SNP A -> G AC=2;AN=184;BQB=0.988768;DP=2951;DP4=1405,1433,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.00687e-14;MQSB=0.989922;RPB=0.960518;SGB=107.526;VDB=0.849619;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.8:10969315 chr08:010969315 0 W/10969315-10969315 FN_769-4-1 Single Base Substitution T-C Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN990-S.SNP.8:10972575 chr08:010972575 0 W/10972575-10972575 FN990-S Single Base Substitution C-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN3834-S.SNP.8:10974957 chr08:010974957 0 W/10974957-10974957 FN3834-S SNP T -> C AC=1;AN=190;BQB=0.991591;DP=3234;DP4=1742,779,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.13491e-14;MQSB=0.652893;RPB=0.267199;SGB=-188.765;VDB=0.825823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.8:10976936 chr08:010976936 0 W/10976936-10976936 FN1750-S SNP C -> T AC=2;AN=188;BQB=0.954446;DP=3953;DP4=1913,1976,21,11;HOB=0.0210502;ICB=0.494738;MQ=31;MQ0F=0.14723;MQB=0.045866;MQSB=0;RPB=0.747641;SGB=-42.845;VDB=0.137955;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.8:10977052 chr08:010977052 0 W/10977052-10977052 FN-220 Single Base Substitution C-T INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN-238.SNP.8:10978865 chr08:010978865 0 W/10978865-10978865 FN-238 Single Base Substitution T-A INTRON HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN429-S.SNP.8:10982403 chr08:010982403 0 W/10982403-10982403 FN429-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g17890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN4047-S.SNP.8:10982530 chr08:010982530 0 W/10982530-10982530 FN4047-S SNP A -> G AC=2;AN=168;BQB=0.931364;DP=2908;DP4=1419,1386,13,13;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.0175378;MQB=5.80294e-09;MQSB=0.0442161;RPB=0.965952;SGB=79.3486;VDB=0.840799;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G1357|1493|LOC_Os08g17890|protein_coding|CODING|LOC_Os08g17890.1|6|1) FN3573-S.SNP.8:10987239 chr08:010987239 0 W/10987239-10987239 FN3573-S SNP G -> A AC=1;AN=188;BQB=0.926967;DP=3148;DP4=1692,1386,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8775e-10;MQSB=0.98294;RPB=0.998654;SGB=46.6141;VDB=0.889349;EFF=INTERGENIC(MODIFIER||||||||||1) FN511-S.SNP.8:10987343 chr08:010987343 0 W/10987343-10987343 FN511-S Single Base Substitution A-T INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3520-S.SNP.8:10987397 chr08:010987397 0 W/10987397-10987397 FN3520-S SNP G -> C AC=1;AN=188;BQB=0.996677;DP=2881;DP4=1200,1595,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45941e-11;MQSB=0.985544;RPB=0.755995;SGB=60.7873;VDB=0.270994;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K5N|1415|LOC_Os08g17910|protein_coding|CODING|LOC_Os08g17910.1|1|1) FN456-S.SNP.8:10987891 chr08:010987891 0 W/10987891-10987891 FN456-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2242-S.SNP.8:10991283 chr08:010991283 0 W/10991283-10991283 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.927104;DP=5045;DP4=2541,2197,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06543e-09;MQSB=0.981564;RPB=0.89842;SGB=43.2083;VDB=0.726376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1165M|1415|LOC_Os08g17910|protein_coding|CODING|LOC_Os08g17910.1|4|1) FN2698-S.SNP.8:10993651 chr08:010993651 0 W/10993651-10993651 FN2698-S SNP G -> A AC=2;AN=200;BQB=0.390769;DP=4786;DP4=2387,2077,17,14;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0919348;MQB=0.560839;MQSB=2.07946e-09;RPB=0.986278;SGB=101.557;VDB=0.273601;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V60|75|LOC_Os08g17920|protein_coding|CODING|LOC_Os08g17920.1|1|1) FN2210-S.SNP.8:10996057 chr08:010996057 0 W/10996057-10996057 FN2210-S SNP T -> A AC=1;AN=190;BQB=0.501772;DP=5014;DP4=2496,2188,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.025728;MQB=0.644834;MQSB=8.42753e-11;RPB=0.691133;SGB=35.4339;VDB=0.730881;EFF=INTERGENIC(MODIFIER||||||||||1) FN-204.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN-204 Single Base Substitution G-A INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-410.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN-410 Single Base Substitution G-A INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-73.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN-73 Single Base Substitution G-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1388-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN1388-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1480-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN1480-S Single Base Substitution G-A INTERGENIC Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1655-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN1655-S Single Base Substitution G-A INTERGENIC Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.841738;DP=1959;DP4=795,1117,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00204186;MQB=0.000850721;MQSB=0.807536;RPB=0.565091;SGB=25.5891;VDB=0.565335;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN2322 SNP G -> A AC=2;AN=192;BQB=0.871046;DP=4259;DP4=2329,1615,15,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00187838;MQB=4.49867e-13;MQSB=0.975895;RPB=0.932609;SGB=59.6861;VDB=0.161654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN2411 SNP G -> A AC=2;AN=198;BQB=0.143611;DP=2644;DP4=1160,1282,8,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00151286;MQB=1.1763e-12;MQSB=0.934077;RPB=0.479428;SGB=104.921;VDB=0.150286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN2596-S SNP G -> A AC=2;AN=186;BQB=0.975753;DP=3233;DP4=1731,1282,11,16;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0.00123724;MQB=3.99229e-15;MQSB=0.91253;RPB=0.643148;SGB=118.476;VDB=0.473699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN2675-S SNP G -> A AC=2;AN=200;BQB=0.801019;DP=4146;DP4=2268,1591,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00120598;MQB=5.226e-24;MQSB=0.997202;RPB=0.398939;SGB=148.425;VDB=0.0472531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.48902;DP=2754;DP4=1683,980,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00145243;MQB=2.18496e-12;MQSB=0.711255;RPB=0.968577;SGB=56.0583;VDB=0.445046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN3600-S SNP G -> A AC=2;AN=190;BQB=0.640198;DP=1616;DP4=754,796,8,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00247525;MQB=0.00125922;MQSB=0.920981;RPB=0.316491;SGB=49.0954;VDB=0.645013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN3948-S SNP G -> A AC=2;AN=168;BQB=0.978316;DP=1496;DP4=692,731,11,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.0026738;MQB=3.17025e-09;MQSB=0.848023;RPB=0.934347;SGB=83.1885;VDB=0.413797;EFF=INTERGENIC(MODIFIER||||||||||1) FN410-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN410-S Single Base Substitution G-A INTERGENIC HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN439-S Single Base Substitution G-A INTERGENIC HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN564-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN564-S Single Base Substitution G-A INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN623-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN623-S Single Base Substitution G-A INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN709-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN709-S Single Base Substitution G-A INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN928-S.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 FN928-S Single Base Substitution G-A INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. W598-2-1.SNP.8:11002016 chr08:011002016 0 W/11002016-11002016 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2275-S.SNP.8:11002447 chr08:011002447 0 W/11002447-11002447 FN2275-S SNP A -> T AC=1;AN=190;BQB=0.086606;DP=2048;DP4=910,655,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00146484;MQB=3.55762e-05;MQSB=1.14776e-10;RPB=0.985364;SGB=38.983;VDB=0.561379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.8:11002897 chr08:011002897 0 W/11002897-11002897 FN-394 Single Base Substitution G-T INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3545-S.SNP.8:11008375 chr08:011008375 0 W/11008375-11008375 FN3545-S SNP G -> A AC=1;AN=188;BQB=0.997813;DP=3128;DP4=1555,1453,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.42464e-09;MQSB=0.945856;RPB=0.994082;SGB=46.6141;VDB=0.292583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.8:11009887 chr08:011009887 0 W/11009887-11009887 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.148249;DP=3888;DP4=1925,1735,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000771605;MQB=3.01189e-06;MQSB=0.867581;RPB=0.908506;SGB=53.6492;VDB=0.945546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.8:11012988 chr08:011012988 0 W/11012988-11012988 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.397075;DP=2172;DP4=1268,872,13,2;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.38674;MQB=0.123942;MQSB=0;RPB=0.884102;SGB=23.5329;VDB=0.528561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.8:11012988 chr08:011012988 0 W/11012988-11012988 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.976758;DP=4755;DP4=2505,2035,12,0;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.276972;MQB=0.616335;MQSB=0;RPB=0.996965;SGB=33.0593;VDB=0.316685;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.8:11012988 chr08:011012988 0 W/11012988-11012988 FN4133-S SNP C -> T AC=2;AN=182;BQB=0.85772;DP=2805;DP4=1532,1200,11,6;HOB=0.0217365;ICB=0.494567;MQ=25;MQ0F=0.31943;MQB=0.722036;MQSB=0;RPB=0.816558;SGB=71.1765;VDB=0.758414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.8:11018663 chr08:011018663 0 W/11018663-11018663 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.796275;DP=3209;DP4=1589,1486,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.52765e-08;MQSB=0.999374;RPB=0.97935;SGB=49.0954;VDB=0.431004;EFF=INTRON(MODIFIER||||277|LOC_Os08g17960|protein_coding|CODING|LOC_Os08g17960.1|2|1) FN3740-S.SNP.8:11021067 chr08:011021067 0 W/11021067-11021067 FN3740-S SNP C -> T AC=1;AN=190;BQB=0.962566;DP=2947;DP4=1339,1483,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45705e-05;MQSB=0.995894;RPB=0.516277;SGB=39.9877;VDB=0.230965;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.8:11022296 chr08:011022296 0 W/11022296-11022296 FN1379-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g17980 photosystem II P680 chlorophyll A apoprotein, putative, expressed SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2453.SNP.8:11037913 chr08:011037913 0 W/11037913-11037913 FN2453 SNP C -> A AC=2;AN=200;BQB=0.97129;DP=4653;DP4=1998,2360,18,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.51412e-24;MQSB=0.839587;RPB=0.91403;SGB=134.004;VDB=0.616896;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E77*|541|LOC_Os08g18000|protein_coding|CODING|LOC_Os08g18000.1|3|1);LOF=(LOC_Os08g18000|LOC_Os08g18000|1|1.00);NMD=(LOC_Os08g18000|LOC_Os08g18000|1|1.00) FN1256-S.SNP.8:11053589 chr08:011053589 0 W/11053589-11053589 FN1256-S Single Base Substitution C-A INTRON HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN3419-S.SNP.8:11058103 chr08:011058103 0 W/11058103-11058103 FN3419-S SNP T -> A AC=1;AN=184;BQB=0.971811;DP=2847;DP4=1411,1348,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58348e-05;MQSB=0.998283;RPB=0.537515;SGB=25.1826;VDB=0.00865347;EFF=INTRON(MODIFIER||||129|LOC_Os08g18044|protein_coding|CODING|LOC_Os08g18044.1|4|1),INTRON(MODIFIER||||284|LOC_Os08g18044|protein_coding|CODING|LOC_Os08g18044.2|5|1) FN2432.SNP.8:11064232 chr08:011064232 0 W/11064232-11064232 FN2432 SNP C -> A AC=1;AN=200;BQB=0.702463;DP=3745;DP4=1668,1895,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000267023;MQB=3.2631e-10;MQSB=0.0588221;RPB=0.987381;SGB=81.8956;VDB=0.0921717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.8:11065142 chr08:011065142 0 W/11065142-11065142 FN2537-S SNP G -> T AC=1;AN=198;BQB=0.0695894;DP=3561;DP4=1839,1554,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00028082;MQB=3.80415e-07;MQSB=0.0967222;RPB=0.820572;SGB=7.75428;VDB=0.269961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D228Y|545|LOC_Os08g18060|protein_coding|CODING|LOC_Os08g18060.1|1|1) FN2440.SNP.8:11068783 chr08:011068783 0 W/11068783-11068783 FN2440 SNP C -> T AC=2;AN=200;BQB=0.980384;DP=3208;DP4=1164,1770,18,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=6.69114e-18;MQSB=0.000316105;RPB=0.681282;SGB=130.399;VDB=0.0885213;EFF=INTRON(MODIFIER||||122|LOC_Os08g18070|protein_coding|CODING|LOC_Os08g18070.1|1|1) FN3822-S.SNP.8:11078478 chr08:011078478 0 W/11078478-11078478 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.652847;DP=2393;DP4=925,1402,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000222065;MQSB=0.988056;RPB=0.130956;SGB=18.3316;VDB=0.0158634;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V69|123|LOC_Os08g18079|protein_coding|CODING|LOC_Os08g18079.1|5|1) FN-406.SNP.8:11079897 chr08:011079897 0 W/11079897-11079897 FN-406 Single Base Substitution T-G INTERGENIC HOMO SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4009-S.SNP.8:11089233 chr08:011089233 0 W/11089233-11089233 FN4009-S SNP G -> T AC=1;AN=168;BQB=0.99951;DP=3095;DP4=1514,1467,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0768982;MQB=0.676953;MQSB=0.687419;RPB=0.387808;SGB=31.3172;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.8:11095552 chr08:011095552 0 W/11095552-11095552 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.942459;DP=4828;DP4=2942,1748,16,18;HOB=5.90737e-05;ICB=0.00011879;MQ=13;MQ0F=0.496272;MQB=4.33205e-05;MQSB=0;RPB=0.991251;SGB=148.222;VDB=0.65874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T1242M|1876|LOC_Os08g18100|protein_coding|CODING|LOC_Os08g18100.1|3|1) FN3667-S.SNP.8:11096211 chr08:011096211 0 W/11096211-11096211 FN3667-S SNP C -> A AC=1;AN=190;BQB=0.883487;DP=2642;DP4=1348,1201,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0946253;MQB=0.062369;MQSB=0.00321533;RPB=0.825023;SGB=32.5467;VDB=0.431004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E1022D|1876|LOC_Os08g18100|protein_coding|CODING|LOC_Os08g18100.1|3|1) FN3667-S.SNP.8:11096232 chr08:011096232 0 W/11096232-11096232 FN3667-S SNP A -> T AC=1;AN=190;BQB=0.956731;DP=2851;DP4=1482,1226,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.111189;MQB=0.10212;MQSB=2.25082e-05;RPB=0.938302;SGB=18.552;VDB=0.19108;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V1015|1876|LOC_Os08g18100|protein_coding|CODING|LOC_Os08g18100.1|3|1) FN3826-S.SNP.8:11096957 chr08:011096957 0 W/11096957-11096957 FN3826-S SNP C -> T AC=1;AN=190;BQB=0.981964;DP=4158;DP4=1801,1743,73,414;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.422799;MQB=0;MQSB=0;RPB=9.2362e-35;SGB=-2478.4;VDB=4.33396e-16;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D774N|1876|LOC_Os08g18100|protein_coding|CODING|LOC_Os08g18100.1|3|1) FN1231-S.SNP.8:11097974 chr08:011097974 0 W/11097974-11097974 FN1231-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g18100 retrotransposon protein, putative, unclassified, expressed SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN499-S.SNP.8:11097979 chr08:011097979 0 W/11097979-11097979 FN499-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g18100 retrotransposon protein, putative, unclassified, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN897-S.SNP.8:11098165 chr08:011098165 0 W/11098165-11098165 FN897-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g18100 retrotransposon protein, putative, unclassified, expressed SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN1065-S.SNP.8:11099052 chr08:011099052 0 W/11099052-11099052 FN1065-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2771-S.SNP.8:11101901 chr08:011101901 0 W/11101901-11101901 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.774608;DP=3467;DP4=1656,1620,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.348e-06;MQSB=0.959117;RPB=0.988762;SGB=16.3688;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.8:11104408 chr08:011104408 0 W/11104408-11104408 FN1251-S Single Base Substitution A-G INTRON HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-166.SNP.8:11105353 chr08:011105353 0 W/11105353-11105353 FN-166 Single Base Substitution C-T INTRON HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN601-S.SNP.8:11108762 chr08:011108762 0 W/11108762-11108762 FN601-S Single Base Substitution G-C INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1414-S.SNP.8:11108843 chr08:011108843 0 W/11108843-11108843 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN948-S.SNP.8:11113102 chr08:011113102 0 W/11113102-11113102 FN948-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g18120 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3842-S.SNP.8:11114630 chr08:011114630 0 W/11114630-11114630 FN3842-S SNP G -> A AC=1;AN=190;BQB=0.932514;DP=3027;DP4=1705,1187,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00033036;MQB=1.70949e-09;MQSB=0.541759;RPB=0.374429;SGB=26.2136;VDB=0.34175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.8:11114631 chr08:011114631 0 W/11114631-11114631 FN3842-S SNP C -> A AC=1;AN=190;BQB=0.219644;DP=3026;DP4=1730,1177,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000660939;MQB=2.27764e-08;MQSB=0.442559;RPB=0.770081;SGB=46.7622;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.8:11115005 chr08:011115005 0 W/11115005-11115005 FN1373-S Single Base Substitution A-G INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2538-S.SNP.8:11117881 chr08:011117881 0 W/11117881-11117881 FN2538-S SNP G -> T AC=1;AN=196;BQB=0.476738;DP=3762;DP4=1869,1693,8,9;HOB=5.20616e-05;ICB=0.000104654;MQ=45;MQ0F=0.0135566;MQB=0.000104129;MQSB=0.00458595;RPB=0.542523;SGB=-100.196;VDB=0.914863;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.8:11126563 chr08:011126563 0 W/11126563-11126563 FN904-S Single Base Substitution T-C INTERGENIC HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2495.SNP.8:11129159 chr08:011129159 0 W/11129159-11129159 FN2495 SNP A -> G AC=1;AN=200;BQB=0.888339;DP=4830;DP4=2191,2354,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62201e-06;MQSB=0.992634;RPB=0.951349;SGB=35.8441;VDB=0.711173;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C224|457|LOC_Os08g18150|protein_coding|CODING|LOC_Os08g18150.1|2|1) FN2275-S.SNP.8:11131788 chr08:011131788 0 W/11131788-11131788 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.330949;DP=4557;DP4=2140,2145,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.14719e-09;MQSB=0.99908;RPB=0.969604;SGB=58.2031;VDB=0.712113;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.8:11142083 chr08:011142083 0 W/11142083-11142083 FN1026-S Single Base Substitution T-C INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN3285-S.SNP.8:11142737 chr08:011142737 0 W/11142737-11142737 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.837068;DP=2881;DP4=1235,1567,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.00576e-08;MQSB=0.771174;RPB=0.92968;SGB=48.7425;VDB=0.983426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.8:11142738 chr08:011142738 0 W/11142738-11142738 FN3285-S SNP A -> T AC=1;AN=184;BQB=0.649549;DP=2885;DP4=1203,1521,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.81457e-08;MQSB=0.778583;RPB=0.932094;SGB=48.7425;VDB=0.983426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.8:11147315 chr08:011147315 0 W/11147315-11147315 FN2305 SNP G -> A AC=1;AN=192;BQB=0.936588;DP=4669;DP4=2135,2322,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0158492;MQB=0.0245194;MQSB=2.54614e-06;RPB=0.698508;SGB=39.78;VDB=0.453798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E420K|1170|LOC_Os08g18180|protein_coding|CODING|LOC_Os08g18180.1|5|1) FN1239-S.SNP.8:11149138 chr08:011149138 0 W/11149138-11149138 FN1239-S Single Base Substitution A-G INTRON HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1379-S.SNP.8:11149381 chr08:011149381 0 W/11149381-11149381 FN1379-S Single Base Substitution G-A INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2109-S.SNP.8:11151033 chr08:011151033 0 W/11151033-11151033 FN2109-S SNP T -> C AC=1;AN=168;BQB=0.506036;DP=2534;DP4=1351,1144,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0406472;MQB=0.557412;MQSB=3.10094e-05;RPB=0.897355;SGB=17.3231;VDB=0.214563;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I968T|1170|LOC_Os08g18180|protein_coding|CODING|LOC_Os08g18180.1|7|1) FN1215-S.SNP.8:11152039 chr08:011152039 0 W/11152039-11152039 FN1215-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN4096-S.SNP.8:11158096 chr08:011158096 0 W/11158096-11158096 FN4096-S SNP G -> C AC=1;AN=182;BQB=0.981586;DP=2590;DP4=1273,1262,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=32;MQ0F=0.253668;MQB=0.669773;MQSB=9.22475e-41;RPB=0.205882;SGB=48.6223;VDB=0.815245;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.8:11180215 chr08:011180215 0 W/11180215-11180215 FN4314-S SNP C -> A AC=1;AN=170;BQB=0.883581;DP=2914;DP4=1021,1826,13,11;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0864791;MQB=0.102307;MQSB=0;RPB=0.642769;SGB=72.7472;VDB=0.0541804;EFF=INTRON(MODIFIER||||2520|LOC_Os08g18730|protein_coding|CODING|LOC_Os08g18730.1|3|1) FN-294.SNP.8:11184368 chr08:011184368 0 W/11184368-11184368 FN-294 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN2478.SNP.8:11186460 chr08:011186460 0 W/11186460-11186460 FN2478 SNP A -> G AC=1;AN=200;BQB=0.630939;DP=7646;DP4=3427,3630,13,18;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.407141;MQB=0.0883398;MQSB=1.18321e-34;RPB=0.821928;SGB=101.557;VDB=0.612226;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.8:11186889 chr08:011186889 0 W/11186889-11186889 FN-189 Single Base Substitution A-G INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3562-S.SNP.8:11236832 chr08:011236832 0 W/11236832-11236832 FN3562-S SNP A -> G AC=2;AN=188;BQB=0.993977;DP=2984;DP4=1682,1164,26,12;HOB=0.0210502;ICB=0.494738;MQ=26;MQ0F=0.0516086;MQB=0.613855;MQSB=1.66608e-29;RPB=0.502045;SGB=124.567;VDB=0.81281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.8:11248763 chr08:011248763 0 W/11248763-11248763 FN2211-S SNP C -> T AC=1;AN=190;BQB=0.954514;DP=3300;DP4=1679,1298,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57578e-05;MQSB=0.276491;RPB=0.546012;SGB=35.4339;VDB=0.275286;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.8:11249991 chr08:011249991 0 W/11249991-11249991 W278-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3285-S.SNP.8:11253197 chr08:011253197 0 W/11253197-11253197 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.994956;DP=3272;DP4=1738,1432,14,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.78797e-10;MQSB=0.983523;RPB=0.997362;SGB=28.3187;VDB=0.497199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.8:11257077 chr08:011257077 0 W/11257077-11257077 FN2674-S SNP A -> T AC=1;AN=200;BQB=1.15213e-06;DP=4677;DP4=2284,2003,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15455e-09;MQSB=0.929025;RPB=0.893419;SGB=37.3004;VDB=0.337235;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.8:11260807 chr08:011260807 0 W/11260807-11260807 W443-5-1-3 Single Base Substitution T-C INTERGENIC HET SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2408.SNP.8:11263444 chr08:011263444 0 W/11263444-11263444 FN2408 SNP C -> G AC=1;AN=200;BQB=0.954168;DP=3463;DP4=1497,1738,2,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.74393e-05;MQSB=2.67613e-05;RPB=0.358698;SGB=22.2439;VDB=0.0204797;EFF=UTR_5_PRIME(MODIFIER||42||449|LOC_Os08g18880|protein_coding|CODING|LOC_Os08g18880.1|1|1) FN548-S.SNP.8:11275142 chr08:011275142 0 W/11275142-11275142 FN548-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN1317-S.SNP.8:11281491 chr08:011281491 0 W/11281491-11281491 FN1317-S Single Base Substitution A-C INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2377.SNP.8:11287797 chr08:011287797 0 W/11287797-11287797 FN2377 SNP C -> T AC=2;AN=192;BQB=0.0381434;DP=3527;DP4=1383,1889,22,27;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00141764;MQB=2.10723e-17;MQSB=3.31954e-28;RPB=0.713641;SGB=57.4139;VDB=0.069703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.8:11287798 chr08:011287798 0 W/11287798-11287798 FN2377 SNP C -> T AC=2;AN=192;BQB=0.46429;DP=3543;DP4=1392,1899,23,21;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00141123;MQB=8.76927e-16;MQSB=1.33986e-27;RPB=0.64312;SGB=49.5922;VDB=0.0651225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.8:11288847 chr08:011288847 0 W/11288847-11288847 FN2457 SNP G -> A AC=1;AN=200;BQB=0.719543;DP=4144;DP4=1983,1880,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12132e-11;MQSB=0.962733;RPB=0.606892;SGB=34.6953;VDB=0.78507;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.8:11290576 chr08:011290576 0 W/11290576-11290576 FN852-S Single Base Substitution C-T INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2476.SNP.8:11291786 chr08:011291786 0 W/11291786-11291786 FN2476 SNP C -> T AC=1;AN=200;BQB=0.992209;DP=4677;DP4=2404,1842,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000213812;MQB=1.05362e-13;MQSB=0.999801;RPB=0.948585;SGB=69.1109;VDB=0.640953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.8:11293455 chr08:011293455 0 W/11293455-11293455 FN2426 SNP T -> A AC=1;AN=200;BQB=0.984961;DP=3859;DP4=1721,1822,19,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0816274;MQB=1.75033e-05;MQSB=1.27928e-10;RPB=0.865099;SGB=132.552;VDB=0.0733659;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.8:11294652 chr08:011294652 0 W/11294652-11294652 FN4143-S SNP G -> A AC=2;AN=170;BQB=0.952267;DP=2078;DP4=793,1225,8,20;HOB=0.0232526;ICB=0.494188;MQ=31;MQ0F=0.0707411;MQB=0.858266;MQSB=0;RPB=0.204022;SGB=86.5178;VDB=0.77654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R25H|2027|LOC_Os08g18940|protein_coding|CODING|LOC_Os08g18940.1|1|1) FN721-S.SNP.8:11296136 chr08:011296136 0 W/11296136-11296136 FN721-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g18940 transposon protein, putative, unclassified, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN484-S.SNP.8:11302187 chr08:011302187 0 W/11302187-11302187 FN484-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g18950 transposon protein, putative, unclassified, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN-123.SNP.8:11315026 chr08:011315026 0 W/11315026-11315026 FN-123 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g18970 pectate lyase family protein, expressed SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN-186.SNP.8:11318299 chr08:011318299 0 W/11318299-11318299 FN-186 Single Base Substitution G-A INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN4022-S.SNP.8:11318430 chr08:011318430 0 W/11318430-11318430 FN4022-S SNP T -> C AC=2;AN=168;BQB=0.748335;DP=2395;DP4=1155,1113,18,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.39477e-14;MQSB=0.369184;RPB=0.986237;SGB=96.481;VDB=0.408242;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.8:11329074 chr08:011329074 0 W/11329074-11329074 FN4073-S SNP G -> A AC=2;AN=182;BQB=0.72473;DP=2736;DP4=1424,1182,13,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.67677e-10;MQSB=0.497587;RPB=0.768146;SGB=63.7146;VDB=0.376376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.8:11338531 chr08:011338531 0 W/11338531-11338531 FN3373-S SNP A -> G AC=1;AN=184;BQB=0.99972;DP=3455;DP4=1637,1703,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.62045e-09;MQSB=0.990232;RPB=0.954554;SGB=18.2315;VDB=0.0211456;EFF=INTERGENIC(MODIFIER||||||||||1) FN660-S.SNP.8:11339443 chr08:011339443 0 W/11339443-11339443 FN660-S Single Base Substitution A-C INTERGENIC HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1440-S.SNP.8:11340104 chr08:011340104 0 W/11340104-11340104 FN1440-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g19000 retrotransposon protein, putative, unclassified SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN445-S.SNP.8:11342069 chr08:011342069 0 W/11342069-11342069 FN445-S Single Base Substitution C-T INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3391-S.SNP.8:11344679 chr08:011344679 0 W/11344679-11344679 FN3391-S SNP A -> G AC=1;AN=184;BQB=0.857381;DP=3175;DP4=1486,1584,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000314961;MQB=5.9812e-11;MQSB=0.83839;RPB=0.990549;SGB=98.4821;VDB=0.284489;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.8:11347294 chr08:011347294 0 W/11347294-11347294 FN772-S Single Base Substitution T-A INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-250.SNP.8:11354895 chr08:011354895 0 W/11354895-11354895 FN-250 Single Base Substitution G-A INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN527-S.SNP.8:11355202 chr08:011355202 0 W/11355202-11355202 FN527-S Single Base Substitution G-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1403-S.SNP.8:11356737 chr08:011356737 0 W/11356737-11356737 FN1403-S Single Base Substitution G-A INTRON HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN-272.SNP.8:11359339 chr08:011359339 0 W/11359339-11359339 FN-272 Single Base Substitution A-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3567-S.SNP.8:11360181 chr08:011360181 0 W/11360181-11360181 FN3567-S SNP G -> A AC=1;AN=186;BQB=0.703594;DP=1953;DP4=547,1298,4,8;HOB=5.78101e-05;ICB=0.000116242;MQ=46;MQ0F=0.0030722;MQB=0.00716901;MQSB=6.46206e-05;RPB=0.955523;SGB=48.979;VDB=0.333659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.8:11362856 chr08:011362856 0 W/11362856-11362856 FN1211-S Single Base Substitution G-T INTRON HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2249-S.SNP.8:11364724 chr08:011364724 0 W/11364724-11364724 FN2249-S SNP C -> T AC=1;AN=190;BQB=0.462586;DP=5170;DP4=2465,2361,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000580271;MQB=2.2341e-10;MQSB=0.995105;RPB=0.487154;SGB=10.3266;VDB=0.899324;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.8:11365702 chr08:011365702 0 W/11365702-11365702 FN670-S Single Base Substitution G-C INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN3287-S.SNP.8:11368886 chr08:011368886 0 W/11368886-11368886 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.520185;DP=2820;DP4=1228,1523,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.80102e-08;MQSB=0.915983;RPB=0.99811;SGB=46.3132;VDB=0.903988;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.8:11371322 chr08:011371322 0 W/11371322-11371322 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.798986;DP=4383;DP4=2103,2035,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.52524e-10;MQSB=0.242486;RPB=0.208615;SGB=37.1297;VDB=0.46529;EFF=INTERGENIC(MODIFIER||||||||||1) FN455-S.SNP.8:11382504 chr08:011382504 0 W/11382504-11382504 FN455-S Single Base Substitution C-T INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1179-S.SNP.8:11390223 chr08:011390223 0 W/11390223-11390223 FN1179-S Single Base Substitution C-T INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1363-S.SNP.8:11393953 chr08:011393953 0 W/11393953-11393953 FN1363-S Single Base Substitution A-G INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3787-S.SNP.8:11394671 chr08:011394671 0 W/11394671-11394671 FN3787-S SNP G -> A AC=2;AN=190;BQB=0.931704;DP=2780;DP4=1419,1269,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.56451e-18;MQSB=0.930094;RPB=0.489438;SGB=126.511;VDB=0.499791;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.8:11420185 chr08:011420185 0 W/11420185-11420185 FN756-S Single Base Substitution G-T INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2438.SNP.8:11422544 chr08:011422544 0 W/11422544-11422544 FN2438 SNP T -> G AC=1;AN=200;BQB=0.543165;DP=4593;DP4=2162,2053,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12476e-16;MQSB=0.968923;RPB=0.902399;SGB=90.7419;VDB=0.434801;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.8:11423935 chr08:011423935 0 W/11423935-11423935 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.835604;DP=3871;DP4=1708,2124,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.05112e-10;MQSB=0.774643;RPB=0.132309;SGB=-13.2184;VDB=0.223785;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.8:11425651 chr08:011425651 0 W/11425651-11425651 FN507-S Single Base Substitution C-T INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN1163-S.SNP.8:11430356 chr08:011430356 0 W/11430356-11430356 FN1163-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g19120 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1492-S.SNP.8:11433358 chr08:011433358 0 W/11433358-11433358 FN1492-S Single Base Substitution T-G INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2199-S.SNP.8:11433451 chr08:011433451 0 W/11433451-11433451 FN2199-S SNP A -> T AC=1;AN=190;BQB=0.781998;DP=5211;DP4=2489,2192,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48506e-08;MQSB=0.847295;RPB=0.306232;SGB=33.8752;VDB=0.267899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.8:11433587 chr08:011433587 0 W/11433587-11433587 FN3518-S SNP A -> C AC=2;AN=188;BQB=0.69781;DP=2833;DP4=1308,1415,14,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.571e-18;MQSB=0.999407;RPB=0.532965;SGB=117.48;VDB=0.909064;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.8:11442254 chr08:011442254 0 W/11442254-11442254 FN620-S Single Base Substitution G-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1465-S.SNP.8:11444079 chr08:011444079 0 W/11444079-11444079 FN1465-S Single Base Substitution C-A SPLICE_SITE_DONOR HET LOC_Os08g19140 adenylate kinase family protein, putative, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN742-S.SNP.8:11454693 chr08:011454693 0 W/11454693-11454693 FN742-S Single Base Substitution C-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN1527-S.SNP.8:11458210 chr08:011458210 0 W/11458210-11458210 FN1527-S Single Base Substitution T-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2530-S.SNP.8:11460556 chr08:011460556 0 W/11460556-11460556 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.262635;DP=3636;DP4=1542,1926,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000275028;MQB=2.25389e-07;MQSB=0.0366893;RPB=0.908811;SGB=9.3494;VDB=0.231556;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A48|671|LOC_Os08g19160|protein_coding|CODING|LOC_Os08g19160.1|1|1) FN3407-S.SNP.8:11482053 chr08:011482053 0 W/11482053-11482053 FN3407-S SNP A -> G AC=1;AN=184;BQB=0.981711;DP=2737;DP4=1391,1239,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08883e-09;MQSB=0.941539;RPB=0.62468;SGB=28.3187;VDB=0.211994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.8:11482183 chr08:011482183 0 W/11482183-11482183 FN1666-S SNP G -> A AC=1;AN=188;BQB=0.388283;DP=4004;DP4=1852,2106,12,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.74004e-14;MQSB=0.940162;RPB=0.649201;SGB=-108.551;VDB=0.217149;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.8:11485261 chr08:011485261 0 W/11485261-11485261 FN-131 Single Base Substitution T-A INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN430-S.SNP.8:11489217 chr08:011489217 0 W/11489217-11489217 FN430-S Single Base Substitution T-G INTRON HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1008-S.SNP.8:11493647 chr08:011493647 0 W/11493647-11493647 FN1008-S Single Base Substitution G-C INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1251-S.SNP.8:11499787 chr08:011499787 0 W/11499787-11499787 FN1251-S Single Base Substitution C-T INTRON HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-76.SNP.8:11503609 chr08:011503609 0 W/11503609-11503609 FN-76 Single Base Substitution A-C INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2198-S.SNP.8:11510811 chr08:011510811 0 W/11510811-11510811 FN2198-S SNP C -> T AC=1;AN=190;BQB=0.936532;DP=3667;DP4=1618,1835,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000133104;MQSB=0.372147;RPB=0.406447;SGB=21.8853;VDB=0.668074;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R37|111|LOC_Os08g19240|protein_coding|CODING|LOC_Os08g19240.1|1|1) FN2082-S.SNP.8:11518882 chr08:011518882 0 W/11518882-11518882 FN2082-S SNP C -> G AC=2;AN=168;BQB=0.450025;DP=3056;DP4=1153,1841,17,30;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000981675;MQB=5.25652e-12;MQSB=0.090252;RPB=0.120087;SGB=-54.3037;VDB=0.329418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.8:11519057 chr08:011519057 0 W/11519057-11519057 FN3353-S SNP C -> A AC=1;AN=184;BQB=0.382778;DP=3346;DP4=1741,1515,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90376e-06;MQSB=0.998503;RPB=0.922901;SGB=66.8296;VDB=0.372154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.8:11524012 chr08:011524012 0 W/11524012-11524012 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.728451;DP=2591;DP4=1240,1266,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.06118e-06;MQSB=0.997034;RPB=0.952107;SGB=28.7043;VDB=0.698487;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.8:11526654 chr08:011526654 0 W/11526654-11526654 FN1505-S Single Base Substitution C-A INTRON HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2297.SNP.8:11532533 chr08:011532533 0 W/11532533-11532533 FN2297 SNP A -> T AC=1;AN=192;BQB=0.686077;DP=5112;DP4=2640,2081,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.86673e-08;MQSB=0.973726;RPB=0.993781;SGB=39.78;VDB=0.478388;EFF=INTERGENIC(MODIFIER||||||||||1) FN1678-S.SNP.8:11535452 chr08:011535452 0 W/11535452-11535452 FN1678-S SNP T -> C AC=1;AN=188;BQB=0.175467;DP=3101;DP4=1844,1214,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16605e-06;MQSB=0.998604;RPB=0.624589;SGB=-58.9891;VDB=0.0339716;EFF=INTRON(MODIFIER||||226|LOC_Os08g19280|protein_coding|CODING|LOC_Os08g19280.1|1|1) FN2388.SNP.8:11536997 chr08:011536997 0 W/11536997-11536997 FN2388 SNP T -> G AC=1;AN=200;BQB=0.841362;DP=4938;DP4=2582,2021,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000202511;MQB=8.89776e-12;MQSB=0.659931;RPB=0.653202;SGB=19.1209;VDB=0.857604;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.8:11539917 chr08:011539917 0 W/11539917-11539917 FN4113-S SNP C -> A AC=2;AN=182;BQB=0.485399;DP=3003;DP4=1487,1414,29,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.74198e-23;MQSB=0.970297;RPB=0.997772;SGB=185.055;VDB=0.606975;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.8:11544396 chr08:011544396 0 W/11544396-11544396 FN4179-S SNP C -> T AC=1;AN=170;BQB=0.91886;DP=2487;DP4=992,1395,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.91506e-08;MQSB=0.978267;RPB=0.778123;SGB=56.7575;VDB=0.79724;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.8:11544627 chr08:011544627 0 W/11544627-11544627 FN666-S Single Base Substitution A-C INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN943-S.SNP.8:11545794 chr08:011545794 0 W/11545794-11545794 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN3325-S.SNP.8:11556196 chr08:011556196 0 W/11556196-11556196 FN3325-S SNP C -> T AC=2;AN=184;BQB=0.724257;DP=2907;DP4=1325,1456,10,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.15691e-17;MQSB=0.895873;RPB=0.975051;SGB=106.184;VDB=0.643629;EFF=INTERGENIC(MODIFIER||||||||||1) FN890-S.SNP.8:11585700 chr08:011585700 0 W/11585700-11585700 FN890-S Single Base Substitution T-A INTRON HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1285-S.SNP.8:11586558 chr08:011586558 0 W/11586558-11586558 FN1285-S Single Base Substitution C-A INTRON HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1379-S.SNP.8:11588974 chr08:011588974 0 W/11588974-11588974 FN1379-S Single Base Substitution A-C UTR_3_PRIME Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN902-S.SNP.8:11590828 chr08:011590828 0 W/11590828-11590828 FN902-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN902-S.SNP.8:11590834 chr08:011590834 0 W/11590834-11590834 FN902-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN-409.SNP.8:11592499 chr08:011592499 0 W/11592499-11592499 FN-409 Single Base Substitution C-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN409-S.SNP.8:11592499 chr08:011592499 0 W/11592499-11592499 FN409-S Single Base Substitution C-A INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN1742-S.SNP.8:11600363 chr08:011600363 0 W/11600363-11600363 FN1742-S SNP C -> T AC=1;AN=188;BQB=0.5252;DP=1530;DP4=980,503,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.38377e-06;MQSB=0.566029;RPB=0.924381;SGB=35.9843;VDB=0.805818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.8:11608632 chr08:011608632 0 W/11608632-11608632 FN2578-S SNP T -> C AC=1;AN=198;BQB=0.916067;DP=3878;DP4=1716,1926,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000257865;MQB=5.23336e-06;MQSB=0.987975;RPB=0.662898;SGB=35.7638;VDB=0.443437;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V364|375|LOC_Os08g19420|protein_coding|CODING|LOC_Os08g19420.1|2|1) FN892-S.SNP.8:11613799 chr08:011613799 0 W/11613799-11613799 FN892-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g19440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1431-S.SNP.8:11614336 chr08:011614336 0 W/11614336-11614336 FN1431-S Single Base Substitution C-T INTRON HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1326-S.SNP.8:11622328 chr08:011622328 0 W/11622328-11622328 FN1326-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3570-S.SNP.8:11633139 chr08:011633139 0 W/11633139-11633139 FN3570-S SNP A -> G AC=1;AN=190;BQB=0.960419;DP=2751;DP4=1313,1278,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.32078e-11;MQSB=0.935878;RPB=0.933597;SGB=85.5263;VDB=0.148642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.8:11636722 chr08:011636722 0 W/11636722-11636722 FN1060-S Single Base Substitution C-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN4241-S.SNP.8:11639402 chr08:011639402 0 W/11639402-11639402 FN4241-S SNP T -> A AC=1;AN=170;BQB=0.998438;DP=2272;DP4=1081,1113,10,14;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.12321e-09;MQSB=0.277384;RPB=0.999418;SGB=72.7472;VDB=0.64766;EFF=INTRON(MODIFIER||||261|LOC_Os08g19480|protein_coding|CODING|LOC_Os08g19480.1|3|1) FN1285-S.SNP.8:11642093 chr08:011642093 0 W/11642093-11642093 FN1285-S Single Base Substitution G-T INTRON HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN3628-S.SNP.8:11647205 chr08:011647205 0 W/11647205-11647205 FN3628-S SNP G -> A AC=2;AN=190;BQB=0.936382;DP=2283;DP4=1025,1152,7,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.000225085;MQSB=0.178266;RPB=0.834306;SGB=46.7622;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.8:11647988 chr08:011647988 0 W/11647988-11647988 FN2467 SNP G -> T AC=1;AN=200;BQB=0.282268;DP=4297;DP4=2135,1855,10,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00674889;MQB=5.05715e-05;MQSB=9.93325e-33;RPB=0.799895;SGB=76.3213;VDB=0.199255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.8:11648322 chr08:011648322 0 W/11648322-11648322 FN-264 Single Base Substitution G-C INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN692-S.SNP.8:11649009 chr08:011649009 0 W/11649009-11649009 FN692-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN3480-S.SNP.8:11649315 chr08:011649315 0 W/11649315-11649315 FN3480-S SNP C -> T AC=2;AN=184;BQB=0.727884;DP=4163;DP4=1867,2190,21,24;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0110497;MQB=0.00869153;MQSB=2.48634e-09;RPB=0.542832;SGB=197.961;VDB=0.281707;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V151|1019|LOC_Os08g19500|protein_coding|CODING|LOC_Os08g19500.1|1|1) FN2602-S.SNP.8:11651311 chr08:011651311 0 W/11651311-11651311 FN2602-S SNP C -> T AC=1;AN=186;BQB=0.818736;DP=3450;DP4=1700,1575,2,6;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0.000289855;MQB=0.00532894;MQSB=0.0456155;RPB=0.199547;SGB=31.1689;VDB=0.836076;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H739|1019|LOC_Os08g19500|protein_coding|CODING|LOC_Os08g19500.1|3|1) FN3632-S.SNP.8:11652742 chr08:011652742 0 W/11652742-11652742 FN3632-S SNP G -> T AC=1;AN=190;BQB=0.927751;DP=1884;DP4=863,922,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00101319;MQSB=0.589872;RPB=0.974229;SGB=39.9877;VDB=0.86321;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.8:11654830 chr08:011654830 0 W/11654830-11654830 FN3782-S SNP C -> A AC=1;AN=190;BQB=0.999117;DP=2829;DP4=1348,1369,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.85633e-06;MQSB=0.111145;RPB=0.997531;SGB=49.0954;VDB=0.898787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.8:11678615 chr08:011678615 0 W/11678615-11678615 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.931888;DP=2361;DP4=1116,1154,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00127065;MQB=0.00717094;MQSB=0.044039;RPB=0.902046;SGB=55.806;VDB=0.116505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M39I|487|LOC_Os08g19530|protein_coding|CODING|LOC_Os08g19530.1|1|1) FN3371-S.SNP.8:11696584 chr08:011696584 0 W/11696584-11696584 FN3371-S SNP A -> G AC=1;AN=184;BQB=0.84966;DP=3624;DP4=1979,1521,16,22;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0262141;MQB=1.06125e-05;MQSB=2.83967e-07;RPB=0.617366;SGB=123.793;VDB=0.561449;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A121|371|LOC_Os08g19570|protein_coding|CODING|LOC_Os08g19570.1|1|1) 705-1.SNP.8:11702234 chr08:011702234 0 W/11702234-11702234 705-1 Single Base Substitution G-A INTERGENIC HET SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.8:11702234 chr08:011702234 0 W/11702234-11702234 705-2 Single Base Substitution G-A INTERGENIC HET SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-7.SNP.8:11702234 chr08:011702234 0 W/11702234-11702234 705-7 Single Base Substitution G-A INTERGENIC Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN1117-S.SNP.8:11702353 chr08:011702353 0 W/11702353-11702353 FN1117-S Single Base Substitution C-T INTERGENIC HOMO SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1453-S.SNP.8:11707020 chr08:011707020 0 W/11707020-11707020 FN1453-S Single Base Substitution T-A INTRON HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN4081-S.SNP.8:11711090 chr08:011711090 0 W/11711090-11711090 FN4081-S SNP A -> T AC=2;AN=182;BQB=0.905914;DP=2981;DP4=1459,1375,21,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.21613e-21;MQSB=0.999285;RPB=0.199846;SGB=95.959;VDB=0.617501;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.8:11711273 chr08:011711273 0 W/11711273-11711273 FN3435-S SNP C -> T AC=1;AN=184;BQB=0.94518;DP=2567;DP4=1073,1422,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03437e-06;MQSB=0.933424;RPB=0.748488;SGB=10.6662;VDB=0.623964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.8:11717234 chr08:011717234 0 W/11717234-11717234 FN4037-S SNP T -> C AC=1;AN=168;BQB=0.600074;DP=3039;DP4=1680,1041,16,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.70549e-13;MQSB=0.734925;RPB=0.236829;SGB=-10.6335;VDB=0.0579674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E137G|173|LOC_Os08g19600|protein_coding|CODING|LOC_Os08g19600.1|1|1) FN1036-S.SNP.8:11719157 chr08:011719157 0 W/11719157-11719157 FN1036-S Single Base Substitution A-T INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN677-S.SNP.8:11723691 chr08:011723691 0 W/11723691-11723691 FN677-S Single Base Substitution T-A INTERGENIC HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN-363.SNP.8:11730970 chr08:011730970 0 W/11730970-11730970 FN-363 Single Base Substitution A-G INTRON HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2083-S.SNP.8:11741387 chr08:011741387 0 W/11741387-11741387 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.959236;DP=3343;DP4=834,2328,84,57;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00388872;MQB=0;MQSB=0.00349004;RPB=3.33414e-05;SGB=-1730;VDB=3.32211e-21;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.8:11749591 chr08:011749591 0 W/11749591-11749591 FN2673-S SNP C -> T AC=2;AN=200;BQB=0.819832;DP=4410;DP4=2336,1836,37,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.01544e-30;MQSB=0.837327;RPB=0.751969;SGB=229.261;VDB=0.0320766;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.8:11754153 chr08:011754153 0 W/11754153-11754153 FN1154-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN3879-S.SNP.8:11755084 chr08:011755084 0 W/11755084-11755084 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.844601;DP=2244;DP4=939,1156,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.80133e-06;MQSB=0.990086;RPB=0.273694;SGB=21.4493;VDB=0.200918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A19T|89|LOC_Os08g19640|protein_coding|CODING|LOC_Os08g19640.1|1|1) FN3548-S.SNP.8:11759762 chr08:011759762 0 W/11759762-11759762 FN3548-S SNP T -> A AC=1;AN=188;BQB=0.763677;DP=2619;DP4=1115,1389,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.92876e-09;MQSB=0.848161;RPB=0.859034;SGB=53.7007;VDB=0.96324;EFF=INTRON(MODIFIER||||278|LOC_Os08g19650|protein_coding|CODING|LOC_Os08g19650.1|1|1),INTRON(MODIFIER||||271|LOC_Os08g19650|protein_coding|CODING|LOC_Os08g19650.2|1|1) FN1737-S.SNP.8:11774021 chr08:011774021 0 W/11774021-11774021 FN1737-S SNP C -> T AC=2;AN=188;BQB=0.562059;DP=2704;DP4=901,1701,17,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.296e-17;MQSB=0.930825;RPB=0.956424;SGB=-45.5852;VDB=0.636695;EFF=UTR_3_PRIME(MODIFIER||47||132|LOC_Os08g19670|protein_coding|CODING|LOC_Os08g19670.1|1|1) FN594-S.SNP.8:11775334 chr08:011775334 0 W/11775334-11775334 FN594-S Single Base Substitution T-C INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2486.SNP.8:11776011 chr08:011776011 0 W/11776011-11776011 FN2486 SNP C -> T AC=1;AN=200;BQB=0.770208;DP=4261;DP4=2062,1887,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000234687;MQB=8.79378e-14;MQSB=0.883048;RPB=0.672115;SGB=90.7419;VDB=0.516023;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.8:11777711 chr08:011777711 0 W/11777711-11777711 FN759-S Single Base Substitution G-A INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN3474-S.SNP.8:11779658 chr08:011779658 0 W/11779658-11779658 FN3474-S SNP A -> T AC=1;AN=184;BQB=0.642233;DP=2897;DP4=1544,1277,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.41995e-09;MQSB=0.96987;RPB=0.879246;SGB=84.9167;VDB=0.0956517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.8:11780190 chr08:011780190 0 W/11780190-11780190 FN3676-S SNP T -> A AC=2;AN=190;BQB=0.778691;DP=2972;DP4=1271,1527,9,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16305e-14;MQSB=0.843455;RPB=0.914945;SGB=100.07;VDB=0.917848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.8:11781362 chr08:011781362 0 W/11781362-11781362 FN1670-S SNP C -> T AC=2;AN=188;BQB=0.0972465;DP=2325;DP4=1381,877,20,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62107e-16;MQSB=0.995422;RPB=0.846012;SGB=71.8555;VDB=0.704321;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A133V|189|LOC_Os08g19680|protein_coding|CODING|LOC_Os08g19680.1|1|1) FN-227.SNP.8:11782010 chr08:011782010 0 W/11782010-11782010 FN-227 Single Base Substitution T-A UTR_3_PRIME HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN-292.SNP.8:11782242 chr08:011782242 0 W/11782242-11782242 FN-292 Single Base Substitution C-T INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1623-S.SNP.8:11789663 chr08:011789663 0 W/11789663-11789663 FN1623-S Single Base Substitution G-A INTRON Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN4047-S.SNP.8:11790132 chr08:011790132 0 W/11790132-11790132 FN4047-S SNP A -> G AC=2;AN=168;BQB=0.964269;DP=2598;DP4=1306,1200,10,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.46311e-11;MQSB=0.998484;RPB=0.438448;SGB=69.8961;VDB=0.349668;EFF=INTRON(MODIFIER||||915|LOC_Os08g19694|protein_coding|CODING|LOC_Os08g19694.1|1|1) FN2653-S.SNP.8:11800725 chr08:011800725 0 W/11800725-11800725 FN2653-S SNP G -> A AC=1;AN=200;BQB=0.247942;DP=4987;DP4=2247,2479,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.36903e-15;MQSB=0.963489;RPB=0.453999;SGB=104.921;VDB=0.741414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.8:11816125 chr08:011816125 0 W/11816125-11816125 FN3360-S SNP T -> G AC=1;AN=184;BQB=0.96917;DP=2814;DP4=1411,1302,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000355366;MQB=9.85794e-08;MQSB=0.976212;RPB=0.122053;SGB=53.2642;VDB=0.564443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3829-S.SNP.8:11816749 chr08:011816749 0 W/11816749-11816749 FN3829-S SNP C -> A AC=1;AN=190;BQB=0.801743;DP=2878;DP4=1545,1237,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.97909e-06;MQSB=0.974239;RPB=0.307041;SGB=13.4442;VDB=0.112032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G158W|227|LOC_Os08g19740|protein_coding|CODING|LOC_Os08g19740.1|2|1) FN-309.SNP.8:11818390 chr08:011818390 0 W/11818390-11818390 FN-309 Single Base Substitution G-A INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1532-S.SNP.8:11818864 chr08:011818864 0 W/11818864-11818864 FN1532-S Single Base Substitution A-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3607-S.SNP.8:11821485 chr08:011821485 0 W/11821485-11821485 FN3607-S SNP C -> T AC=1;AN=190;BQB=0.718465;DP=2849;DP4=1485,1217,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.003861;MQB=7.37669e-06;MQSB=1.43684e-05;RPB=0.760052;SGB=53.8699;VDB=0.752893;EFF=INTRON(MODIFIER||||608|LOC_Os08g19750|protein_coding|CODING|LOC_Os08g19750.1|1|1) FN224-S.SNP.8:11822539 chr08:011822539 0 W/11822539-11822539 FN224-S Single Base Substitution G-C INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN4255-S.SNP.8:11823914 chr08:011823914 0 W/11823914-11823914 FN4255-S SNP C -> G AC=1;AN=170;BQB=0.790223;DP=2458;DP4=916,1438,2,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.0615e-07;MQSB=0.734371;RPB=0.983593;SGB=43.4296;VDB=0.913388;EFF=INTRON(MODIFIER||||608|LOC_Os08g19750|protein_coding|CODING|LOC_Os08g19750.1|4|1) FN3852-S.SNP.8:11824685 chr08:011824685 0 W/11824685-11824685 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.994185;DP=2410;DP4=1344,971,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000684822;MQSB=0.765039;RPB=0.975004;SGB=27.3346;VDB=0.781309;EFF=INTRON(MODIFIER||||608|LOC_Os08g19750|protein_coding|CODING|LOC_Os08g19750.1|4|1) FN1614-S.SNP.8:11833374 chr08:011833374 0 W/11833374-11833374 FN1614-S Single Base Substitution C-T INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1614-S.SNP.8:11833375 chr08:011833375 0 W/11833375-11833375 FN1614-S Single Base Substitution T-C INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4255-S.SNP.8:11833485 chr08:011833485 0 W/11833485-11833485 FN4255-S SNP A -> G AC=1;AN=170;BQB=0.873974;DP=2429;DP4=1260,1057,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=7.09103e-08;MQSB=0.348564;RPB=0.607181;SGB=47.8722;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.8:11834601 chr08:011834601 0 W/11834601-11834601 FN4078-S SNP C -> G AC=1;AN=182;BQB=0.985446;DP=3204;DP4=1575,1537,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00031211;MQB=2.41824e-07;MQSB=0.859222;RPB=0.421449;SGB=48.6223;VDB=0.407316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.8:11835499 chr08:011835499 0 W/11835499-11835499 FN3310-S SNP C -> G AC=2;AN=184;BQB=0.943315;DP=3312;DP4=1515,1687,14,18;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.0093599;MQB=5.41774e-10;MQSB=0.0224943;RPB=0.261355;SGB=139.178;VDB=0.700323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.8:11836743 chr08:011836743 0 W/11836743-11836743 FN1525-S Single Base Substitution A-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2797-S.SNP.8:11836986 chr08:011836986 0 W/11836986-11836986 FN2797-S SNP C -> T AC=1;AN=188;BQB=0.992634;DP=3416;DP4=1536,1664,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00058548;MQB=4.5768e-11;MQSB=0.542911;RPB=0.999584;SGB=86.3098;VDB=0.67741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.8:11837595 chr08:011837595 0 W/11837595-11837595 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2351.SNP.8:11847644 chr08:011847644 0 W/11847644-11847644 FN2351 SNP A -> C AC=2;AN=192;BQB=0.985147;DP=5490;DP4=2683,2435,21,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.48991e-21;MQSB=0.522143;RPB=0.798105;SGB=43.3348;VDB=0.346706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.8:11854817 chr08:011854817 0 W/11854817-11854817 FN1302-S Single Base Substitution G-A INTRON HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1302-S.SNP.8:11854819 chr08:011854819 0 W/11854819-11854819 FN1302-S Single Base Substitution G-A INTRON HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1001-S.SNP.8:11859870 chr08:011859870 0 W/11859870-11859870 FN1001-S Single Base Substitution T-A STOP_GAINED HET LOC_Os08g19820 expressed protein SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN-375.SNP.8:11860590 chr08:011860590 0 W/11860590-11860590 FN-375 Single Base Substitution G-A INTRON HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN1195-S.SNP.8:11862572 chr08:011862572 0 W/11862572-11862572 FN1195-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2348.SNP.8:11863016 chr08:011863016 0 W/11863016-11863016 FN2348 SNP C -> A AC=1;AN=192;BQB=0.252605;DP=4522;DP4=2220,2014,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04459e-06;MQSB=0.999327;RPB=0.993004;SGB=5.79046;VDB=0.317166;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.8:11863949 chr08:011863949 0 W/11863949-11863949 FN2731-S SNP A -> T AC=1;AN=200;BQB=0.78417;DP=5050;DP4=2432,2279,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.99875e-10;MQSB=0.950084;RPB=0.778307;SGB=51.0851;VDB=0.376003;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.8:11865191 chr08:011865191 0 W/11865191-11865191 FN4255-S SNP G -> T AC=1;AN=170;BQB=0.918123;DP=2245;DP4=1131,1045,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.25935e-07;MQSB=0.20956;RPB=0.610769;SGB=27.9928;VDB=0.141079;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.8:11865192 chr08:011865192 0 W/11865192-11865192 FN4255-S SNP G -> T AC=1;AN=170;BQB=0.934627;DP=2251;DP4=1134,1045,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.51925e-06;MQSB=0.30151;RPB=0.71833;SGB=34.5445;VDB=0.219792;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.8:11868091 chr08:011868091 0 W/11868091-11868091 FN2686-S SNP A -> G AC=1;AN=200;BQB=0.630427;DP=5010;DP4=2457,2314,3,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000228668;MQSB=0.939973;RPB=0.453958;SGB=22.0312;VDB=0.15187;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.8:11868339 chr08:011868339 0 W/11868339-11868339 FN1381-S Single Base Substitution T-A INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2665-S.SNP.8:11868671 chr08:011868671 0 W/11868671-11868671 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.96985;DP=5020;DP4=2434,2327,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76335e-16;MQSB=0.799009;RPB=0.999993;SGB=58.1418;VDB=0.341197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.8:11873867 chr08:011873867 0 W/11873867-11873867 FN2118-S SNP A -> G AC=1;AN=168;BQB=0.855353;DP=3437;DP4=1909,1503,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.37644e-10;MQSB=0.537112;RPB=0.974715;SGB=31.908;VDB=0.346674;EFF=INTRON(MODIFIER||||682|LOC_Os08g19830|protein_coding|CODING|LOC_Os08g19830.1|11|1),INTRON(MODIFIER||||552|LOC_Os08g19830|protein_coding|CODING|LOC_Os08g19830.3|11|1) FN1295-S.SNP.8:11880069 chr08:011880069 0 W/11880069-11880069 FN1295-S Single Base Substitution C-T INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-246.SNP.8:11885003 chr08:011885003 0 W/11885003-11885003 FN-246 Single Base Substitution A-T INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2109-S.SNP.8:11892207 chr08:011892207 0 W/11892207-11892207 FN2109-S SNP T -> G AC=1;AN=168;BQB=0.32597;DP=4291;DP4=2011,2221,23,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.45112e-21;MQSB=0.996519;RPB=0.518803;SGB=-104.159;VDB=0.283938;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E499A|745|LOC_Os08g19850|protein_coding|CODING|LOC_Os08g19850.1|13|1) FN2353.SNP.8:11903169 chr08:011903169 0 W/11903169-11903169 FN2353 SNP G -> A AC=1;AN=192;BQB=0.81546;DP=4736;DP4=2281,2196,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66344e-13;MQSB=0.998757;RPB=0.890044;SGB=75.4235;VDB=0.851686;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K529|617|LOC_Os08g19860|protein_coding|CODING|LOC_Os08g19860.1|3|1) FN2126-S.SNP.8:11907694 chr08:011907694 0 W/11907694-11907694 FN2126-S SNP G -> A AC=1;AN=168;BQB=0.802999;DP=3059;DP4=1193,1790,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.000516308;MQSB=4.6683e-05;RPB=0.323323;SGB=27.0464;VDB=0.392095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.8:11914088 chr08:011914088 0 W/11914088-11914088 FN3282-S SNP T -> C AC=2;AN=184;BQB=0.968216;DP=2715;DP4=1395,1192,8,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.55205e-16;MQSB=0.614845;RPB=0.848111;SGB=121.091;VDB=0.0421603;EFF=INTRON(MODIFIER||||1750|LOC_Os08g19890|protein_coding|CODING|LOC_Os08g19890.1|9|1) FN627-S.SNP.8:11916507 chr08:011916507 0 W/11916507-11916507 FN627-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2098-S.SNP.8:11918033 chr08:011918033 0 W/11918033-11918033 FN2098-S SNP C -> T AC=1;AN=168;BQB=0.667946;DP=2874;DP4=1444,1392,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.43851e-08;MQSB=0.977242;RPB=0.988731;SGB=-14.0801;VDB=0.606386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G188S|1750|LOC_Os08g19890|protein_coding|CODING|LOC_Os08g19890.1|3|1) FN1763-S.SNP.8:11929571 chr08:011929571 0 W/11929571-11929571 FN1763-S SNP C -> T AC=1;AN=188;BQB=0.951414;DP=2426;DP4=1246,1139,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000342748;MQSB=0.976384;RPB=0.699473;SGB=-2.17824;VDB=0.902818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P79L|839|LOC_Os08g19920|protein_coding|CODING|LOC_Os08g19920.1|3|1) FN2670-S.SNP.8:11936344 chr08:011936344 0 W/11936344-11936344 FN2670-S SNP T -> C AC=1;AN=200;BQB=0.989606;DP=4759;DP4=2472,2016,23,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.03253e-22;MQSB=0.905385;RPB=0.157156;SGB=84.1935;VDB=0.609494;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M15T|660|LOC_Os08g19930|protein_coding|CODING|LOC_Os08g19930.1|2|1),SPLICE_SITE_REGION(LOW||||660|LOC_Os08g19930|protein_coding|CODING|LOC_Os08g19930.1|2|1) FN2411.SNP.8:11937875 chr08:011937875 0 W/11937875-11937875 FN2411 SNP G -> A AC=1;AN=200;BQB=0.847694;DP=4666;DP4=2221,2208,22,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42964e-24;MQSB=0.99248;RPB=0.521206;SGB=0.808681;VDB=0.0710283;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K325|660|LOC_Os08g19930|protein_coding|CODING|LOC_Os08g19930.1|4|1) FN1276-S.SNP.8:11939168 chr08:011939168 0 W/11939168-11939168 FN1276-S Single Base Substitution C-T INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN547-S.SNP.8:11940519 chr08:011940519 0 W/11940519-11940519 FN547-S Single Base Substitution G-T INTRON HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN889-S.SNP.8:11942052 chr08:011942052 0 W/11942052-11942052 FN889-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g19950 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2729-S.SNP.8:11943277 chr08:011943277 0 W/11943277-11943277 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.911981;DP=4279;DP4=1994,2051,10,4;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.133209;MQB=0.0755215;MQSB=0.930206;RPB=0.241256;SGB=58.8698;VDB=0.317419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3918-S.SNP.8:11943516 chr08:011943516 0 W/11943516-11943516 FN3918-S SNP A -> T AC=1;AN=158;BQB=0.970538;DP=2426;DP4=1193,1175,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0189613;MQB=0.0256635;MQSB=0.614027;RPB=0.914548;SGB=37.4429;VDB=0.95886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.8:11949294 chr08:011949294 0 W/11949294-11949294 FN3305-S SNP C -> T AC=1;AN=184;BQB=0.327573;DP=2779;DP4=1386,1297,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000428595;MQSB=0.839225;RPB=0.845518;SGB=35.7479;VDB=0.279601;EFF=INTRON(MODIFIER||||1436|LOC_Os08g19970|protein_coding|CODING|LOC_Os08g19970.1|1|1) FN1763-S.SNP.8:11950732 chr08:011950732 0 W/11950732-11950732 FN1763-S SNP T -> G AC=1;AN=188;BQB=0.0623131;DP=3168;DP4=1430,1711,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0104167;MQB=0.615672;MQSB=0.726716;RPB=0.536434;SGB=-53.1623;VDB=0.723817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V256G|1436|LOC_Os08g19970|protein_coding|CODING|LOC_Os08g19970.1|3|1) FN4230-S.SNP.8:11959850 chr08:011959850 0 W/11959850-11959850 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.998474;DP=2435;DP4=1259,1126,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.07578e-07;MQSB=0.956438;RPB=0.379311;SGB=43.4296;VDB=0.293805;EFF=INTRON(MODIFIER||||926|LOC_Os08g19980|protein_coding|CODING|LOC_Os08g19980.1|2|1) FN2262-S.SNP.8:11962951 chr08:011962951 0 W/11962951-11962951 FN2262-S SNP T -> C AC=1;AN=190;BQB=0.626108;DP=5089;DP4=2325,2445,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.63657e-18;MQSB=0.881575;RPB=0.315643;SGB=100.07;VDB=0.0667588;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q265|926|LOC_Os08g19980|protein_coding|CODING|LOC_Os08g19980.1|2|1) FN2729-S.SNP.8:11972147 chr08:011972147 0 W/11972147-11972147 FN2729-S SNP G -> C AC=1;AN=200;BQB=0.576066;DP=4831;DP4=2337,2215,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1383e-11;MQSB=0.991489;RPB=0.447665;SGB=54.6902;VDB=0.379795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G631R|739|LOC_Os08g19990|protein_coding|CODING|LOC_Os08g19990.1|6|1) FN-147.SNP.8:11988069 chr08:011988069 0 W/11988069-11988069 FN-147 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g20020 octicosapeptide/Phox/Bem1p, putative, expressed SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN1478-S.SNP.8:11991730 chr08:011991730 0 W/11991730-11991730 FN1478-S Single Base Substitution A-T INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1658-S.SNP.8:12000805 chr08:012000805 0 W/12000805-12000805 FN1658-S SNP C -> G AC=2;AN=188;BQB=0.863263;DP=2893;DP4=1475,1363,10,5;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00103699;MQB=0.000219557;MQSB=0.00308851;RPB=0.897341;SGB=43.0708;VDB=0.855535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L735V|1461|LOC_Os08g20030|protein_coding|CODING|LOC_Os08g20030.1|5|1) FN2095-S.SNP.8:12003203 chr08:012003203 0 W/12003203-12003203 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.569369;DP=2323;DP4=1052,1232,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00688765;MQB=0.222497;MQSB=5.88857e-14;RPB=0.554619;SGB=-1.53256;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.8:12007088 chr08:012007088 0 W/12007088-12007088 FN-400 Single Base Substitution T-C INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2407.SNP.8:12007088 chr08:012007088 0 W/12007088-12007088 FN2407 SNP T -> C AC=2;AN=200;BQB=0.999994;DP=4400;DP4=2019,2067,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.97629e-19;MQSB=0.979393;RPB=0.9861;SGB=78.9831;VDB=0.103706;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.8:12007088 chr08:012007088 0 W/12007088-12007088 FN948-S Single Base Substitution T-C INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN726-S.SNP.8:12011033 chr08:012011033 0 W/12011033-12011033 FN726-S Single Base Substitution C-T INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2089-S.SNP.8:12011417 chr08:012011417 0 W/12011417-12011417 FN2089-S SNP C -> T AC=1;AN=168;BQB=0.482707;DP=3289;DP4=1621,1614,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01182e-08;MQSB=0.910448;RPB=0.814047;SGB=-98.0622;VDB=0.259426;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.8:12011622 chr08:012011622 0 W/12011622-12011622 FN480-S Single Base Substitution C-A INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1486-S.SNP.8:12012720 chr08:012012720 0 W/12012720-12012720 FN1486-S Single Base Substitution G-A INTERGENIC HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN3668-S.SNP.8:12012735 chr08:012012735 0 W/12012735-12012735 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.961086;DP=3537;DP4=1984,1435,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00537178;MQB=5.35408e-09;MQSB=0.321775;RPB=0.0191959;SGB=96.5165;VDB=0.190755;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.8:12014709 chr08:012014709 0 W/12014709-12014709 FN862-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g20050 retrotransposon, putative, centromere-specific, expressed SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN454-S.SNP.8:12017185 chr08:012017185 0 W/12017185-12017185 FN454-S Single Base Substitution C-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN4111-S.SNP.8:12024379 chr08:012024379 0 W/12024379-12024379 FN4111-S SNP G -> C AC=1;AN=182;BQB=0.998393;DP=3118;DP4=1353,1677,20,16;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0221296;MQB=1.38076e-07;MQSB=0.982082;RPB=0.292723;SGB=156.883;VDB=0.563514;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.8:12026280 chr08:012026280 0 W/12026280-12026280 FN4204-S SNP A -> G AC=1;AN=170;BQB=0.913773;DP=2294;DP4=1145,1000,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.92597e-10;MQSB=0.643716;RPB=0.851785;SGB=65.6427;VDB=0.398999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.8:12027902 chr08:012027902 0 W/12027902-12027902 FN2706-S SNP A -> T AC=1;AN=200;BQB=0.34987;DP=4294;DP4=2069,1990,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35563e-12;MQSB=0.926224;RPB=0.905276;SGB=39.9056;VDB=0.952909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F554I|609|LOC_Os08g20060|protein_coding|CODING|LOC_Os08g20060.1|3|1) FN835-S.SNP.8:12027948 chr08:012027948 0 W/12027948-12027948 FN835-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN_789-2-1.SNP.8:12032660 chr08:012032660 0 W/12032660-12032660 FN_789-2-1 Single Base Substitution G-C HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1727-S.SNP.8:12033638 chr08:012033638 0 W/12033638-12033638 FN1727-S SNP A -> T AC=2;AN=188;BQB=0.316751;DP=2490;DP4=1010,1436,7,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.44234e-09;MQSB=0.978158;RPB=0.461955;SGB=-67.7293;VDB=0.793827;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.8:12036049 chr08:012036049 0 W/12036049-12036049 FN584-S Single Base Substitution G-A INTRON HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN511-S.SNP.8:12036322 chr08:012036322 0 W/12036322-12036322 FN511-S Single Base Substitution G-T INTRON HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3366-S.SNP.8:12037362 chr08:012037362 0 W/12037362-12037362 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.778586;DP=3030;DP4=1329,1560,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000330033;MQB=5.31545e-05;MQSB=0.920953;RPB=0.445646;SGB=44.2207;VDB=0.896471;EFF=INTRON(MODIFIER||||270|LOC_Os08g20080|protein_coding|CODING|LOC_Os08g20080.1|2|1) FN2533-S.SNP.8:12047315 chr08:012047315 0 W/12047315-12047315 FN2533-S SNP T -> A AC=1;AN=186;BQB=0.405511;DP=3324;DP4=1885,1225,3,3;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.000360888;MQSB=0.625708;RPB=0.704546;SGB=21.981;VDB=0.284203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.8:12047485 chr08:012047485 0 W/12047485-12047485 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.832668;DP=2894;DP4=1259,1543,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000190157;MQSB=0.990817;RPB=0.975402;SGB=39.699;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.8:12049868 chr08:012049868 0 W/12049868-12049868 FN2333 SNP C -> T AC=1;AN=192;BQB=0.777856;DP=4732;DP4=2091,2370,3,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000211327;MQB=6.79441e-05;MQSB=0.035837;RPB=0.968989;SGB=44.6462;VDB=0.582135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.8:12053810 chr08:012053810 0 W/12053810-12053810 FN2696-S SNP A -> G AC=2;AN=200;BQB=0.650946;DP=4532;DP4=2095,2127,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.43764e-19;MQSB=0.936773;RPB=0.96494;SGB=41.5933;VDB=0.495509;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G269|1172|LOC_Os08g20110|protein_coding|CODING|LOC_Os08g20110.1|2|1) FN3825-S.SNP.8:12059990 chr08:012059990 0 W/12059990-12059990 FN3825-S SNP C -> A AC=1;AN=190;BQB=0.999293;DP=2677;DP4=1422,1138,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04228e-09;MQSB=0.993431;RPB=0.957883;SGB=71.8647;VDB=0.244727;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.8:12062938 chr08:012062938 0 W/12062938-12062938 FN944-S Single Base Substitution C-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2533-S.SNP.8:12065273 chr08:012065273 0 W/12065273-12065273 FN2533-S SNP G -> A AC=1;AN=198;BQB=0.144827;DP=4523;DP4=2281,1958,11,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.22215e-07;MQSB=0.723618;RPB=0.22769;SGB=26.7492;VDB=0.265944;EFF=INTERGENIC(MODIFIER||||||||||1) FN471-S.SNP.8:12069912 chr08:012069912 0 W/12069912-12069912 FN471-S Single Base Substitution G-A INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2629-S.SNP.8:12075743 chr08:012075743 0 W/12075743-12075743 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.996042;DP=5344;DP4=2437,2493,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.52139e-15;MQSB=0.340007;RPB=0.975494;SGB=-7.6637;VDB=0.0984455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.8:12078067 chr08:012078067 0 W/12078067-12078067 FN2751-S SNP A -> C AC=1;AN=200;BQB=0.301465;DP=5219;DP4=2359,2690,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.66953e-13;MQSB=0.490303;RPB=0.889521;SGB=91.1059;VDB=0.659092;EFF=INTERGENIC(MODIFIER||||||||||1) FN1704-S.SNP.8:12078965 chr08:012078965 0 W/12078965-12078965 FN1704-S SNP T -> C AC=2;AN=188;BQB=0.0496047;DP=2677;DP4=1541,1050,19,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.70622e-11;MQSB=0.979351;RPB=0.981556;SGB=-118.378;VDB=0.636415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.8:12086046 chr08:012086046 0 W/12086046-12086046 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.410589;DP=5274;DP4=2335,2596,11,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000379219;MQB=9.60076e-06;MQSB=0.178163;RPB=0.101117;SGB=61.9006;VDB=0.885115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.8:12087836 chr08:012087836 0 W/12087836-12087836 FN3855-S SNP T -> C AC=1;AN=158;BQB=0.911956;DP=2476;DP4=1196,1168,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22983e-09;MQSB=0.976338;RPB=0.964731;SGB=77.6532;VDB=0.511853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.8:12090234 chr08:012090234 0 W/12090234-12090234 FN2471 SNP G -> C AC=1;AN=200;BQB=0.735472;DP=4350;DP4=1963,2136,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22395e-10;MQSB=0.944309;RPB=0.936655;SGB=58.2954;VDB=0.139324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A500P|1558|LOC_Os08g20170|protein_coding|CODING|LOC_Os08g20170.1|5|1) FN1080-S.SNP.8:12103181 chr08:012103181 0 W/12103181-12103181 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1545-S.SNP.8:12104145 chr08:012104145 0 W/12104145-12104145 FN1545-S Single Base Substitution G-A INTERGENIC Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2544-S.SNP.8:12105397 chr08:012105397 0 W/12105397-12105397 FN2544-S SNP T -> C AC=1;AN=198;BQB=0.836087;DP=4229;DP4=1958,2035,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000472925;MQB=0.000358418;MQSB=0.63219;RPB=0.999217;SGB=29.3637;VDB=0.74549;EFF=INTRON(MODIFIER||||879|LOC_Os08g20180|protein_coding|CODING|LOC_Os08g20180.1|4|1) FN926-S.SNP.8:12105397 chr08:012105397 0 W/12105397-12105397 FN926-S Single Base Substitution T-C INTRON HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2164-S.SNP.8:12106632 chr08:012106632 0 W/12106632-12106632 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.382978;DP=3102;DP4=1547,1489,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.05038e-11;MQSB=0.941181;RPB=0.9666;SGB=-133.625;VDB=0.785202;EFF=INTRON(MODIFIER||||879|LOC_Os08g20180|protein_coding|CODING|LOC_Os08g20180.1|3|1) FN-156.SNP.8:12107257 chr08:012107257 0 W/12107257-12107257 FN-156 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g20180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3306-S.SNP.8:12107532 chr08:012107532 0 W/12107532-12107532 FN3306-S SNP G -> A AC=1;AN=184;BQB=0.985721;DP=2761;DP4=1304,1349,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74929e-05;MQSB=0.783044;RPB=0.420917;SGB=30.6558;VDB=0.3669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P540S|879|LOC_Os08g20180|protein_coding|CODING|LOC_Os08g20180.1|3|1) FN4010-S.SNP.8:12114540 chr08:012114540 0 W/12114540-12114540 FN4010-S SNP T -> A AC=1;AN=168;BQB=0.611075;DP=2899;DP4=1115,1676,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.77265e-10;MQSB=0.968607;RPB=0.786054;SGB=72.4869;VDB=0.465065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.8:12116742 chr08:012116742 0 W/12116742-12116742 FN3757-S SNP G -> A AC=2;AN=190;BQB=0.424415;DP=2524;DP4=1233,1197,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27055e-14;MQSB=0.999973;RPB=0.403216;SGB=78.7471;VDB=0.512455;EFF=UTR_5_PRIME(MODIFIER||582||338|LOC_Os08g20200|protein_coding|CODING|LOC_Os08g20200.2|2|1),INTRON(MODIFIER||||496|LOC_Os08g20200|protein_coding|CODING|LOC_Os08g20200.1|2|1) FN682-S.SNP.8:12122585 chr08:012122585 0 W/12122585-12122585 FN682-S Single Base Substitution C-T INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2749-S.SNP.8:12128455 chr08:012128455 0 W/12128455-12128455 FN2749-S SNP A -> C AC=1;AN=200;BQB=1.75577e-11;DP=3157;DP4=1770,981,19,14;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.0221729;MQB=0.816362;MQSB=0;RPB=3.41107e-14;SGB=-718.436;VDB=0.000286832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.8:12128456 chr08:012128456 0 W/12128456-12128456 FN2749-S SNP G -> T AC=1;AN=200;BQB=1.94512e-14;DP=3171;DP4=1779,1018,24,15;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.0220751;MQB=0.879979;MQSB=0;RPB=1.10081e-16;SGB=-1046.81;VDB=0.000389468;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.8:12133727 chr08:012133727 0 W/12133727-12133727 FN-281 Single Base Substitution A-T INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1326-S.SNP.8:12134766 chr08:012134766 0 W/12134766-12134766 FN1326-S Single Base Substitution G-A SPLICE_SITE_DONOR HOMO LOC_Os08g20220 retrotransposon protein, putative, unclassified, expressed SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2261-S.SNP.8:12135624 chr08:012135624 0 W/12135624-12135624 FN2261-S SNP C -> G AC=1;AN=190;BQB=0.924334;DP=7261;DP4=2582,4199,11,29;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.218152;MQB=0.248807;MQSB=0;RPB=0.797029;SGB=42.958;VDB=0.066275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S422C|1359|LOC_Os08g20220|protein_coding|CODING|LOC_Os08g20220.1|7|1) FN953-S.SNP.8:12139944 chr08:012139944 0 W/12139944-12139944 FN953-S Single Base Substitution C-T INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2461.SNP.8:12141709 chr08:012141709 0 W/12141709-12141709 FN2461 SNP A -> T AC=1;AN=200;BQB=0.999987;DP=4683;DP4=2229,2189,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3287e-16;MQSB=0.931756;RPB=0.848108;SGB=90.7419;VDB=0.832702;EFF=INTRON(MODIFIER||||232|LOC_Os08g20230|protein_coding|CODING|LOC_Os08g20230.1|4|1) FN-100.SNP.8:12143256 chr08:012143256 0 W/12143256-12143256 FN-100 Single Base Substitution T-A INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN2794-S.SNP.8:12144301 chr08:012144301 0 W/12144301-12144301 FN2794-S SNP C -> G AC=1;AN=198;BQB=0.831106;DP=4334;DP4=2249,1843,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.31795e-07;MQSB=0.899116;RPB=0.977213;SGB=49.5489;VDB=0.916585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2607-S.SNP.8:12145261 chr08:012145261 0 W/12145261-12145261 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.999626;DP=4341;DP4=2253,1885,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.06416e-08;MQSB=0.691212;RPB=0.361902;SGB=58.7391;VDB=0.2043;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.8:12146523 chr08:012146523 0 W/12146523-12146523 FN2330 SNP T -> A AC=1;AN=192;BQB=0.993621;DP=5288;DP4=2682,2321,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14528e-11;MQSB=0.975149;RPB=0.970222;SGB=76.5965;VDB=0.16293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.8:12148055 chr08:012148055 0 W/12148055-12148055 FN2339 SNP C -> T AC=2;AN=192;BQB=0.240768;DP=4498;DP4=1921,2138,16,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.25094e-14;MQSB=0.00163817;RPB=0.999688;SGB=75.0722;VDB=0.752135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.8:12154311 chr08:012154311 0 W/12154311-12154311 FN2289 SNP A -> T AC=1;AN=192;BQB=0.952155;DP=4876;DP4=2280,2309,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0978261;MQB=0.230117;MQSB=0;RPB=0.526178;SGB=39.1713;VDB=0.0367556;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V487E|1238|LOC_Os08g20250|protein_coding|CODING|LOC_Os08g20250.1|4|1) FN2602-S.SNP.8:12162837 chr08:012162837 0 W/12162837-12162837 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.990111;DP=3981;DP4=2103,1718,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.10525;MQB=0.699375;MQSB=0;RPB=0.978828;SGB=58.7391;VDB=0.215711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.8:12168146 chr08:012168146 0 W/12168146-12168146 FN3803-S SNP A -> G AC=2;AN=190;BQB=0.828554;DP=3149;DP4=1376,1614,24,31;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.01302;MQB=2.69384e-12;MQSB=0.85365;RPB=0.999674;SGB=143.272;VDB=0.135638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.8:12172832 chr08:012172832 0 W/12172832-12172832 FN3835-S SNP G -> C AC=1;AN=190;BQB=0.980845;DP=2928;DP4=1449,1374,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.57868e-07;MQSB=0.872071;RPB=0.507186;SGB=32.5467;VDB=0.787081;EFF=INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.1|4|1),INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.2|3|1) FN3835-S.SNP.8:12172835 chr08:012172835 0 W/12172835-12172835 FN3835-S SNP A -> T AC=1;AN=190;BQB=0.377586;DP=2930;DP4=1446,1400,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89981e-06;MQSB=0.817404;RPB=0.407659;SGB=13.4442;VDB=0.786011;EFF=INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.1|4|1),INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.2|3|1) FN2492.SNP.8:12174300 chr08:012174300 0 W/12174300-12174300 FN2492 SNP G -> A AC=1;AN=200;BQB=0.0266192;DP=4272;DP4=1842,2095,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24507e-11;MQSB=0.997355;RPB=0.765478;SGB=-9.47921;VDB=0.997308;EFF=INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.1|5|1),INTRON(MODIFIER||||298|LOC_Os08g20270|protein_coding|CODING|LOC_Os08g20270.2|4|1) FN3811-S.SNP.8:12179824 chr08:012179824 0 W/12179824-12179824 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.942558;DP=2364;DP4=1119,1163,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.39146e-07;MQSB=0.99351;RPB=0.295505;SGB=28.9929;VDB=0.801999;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.8:12181242 chr08:012181242 0 W/12181242-12181242 FN695-S Single Base Substitution G-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3547-S.SNP.8:12182241 chr08:012182241 0 W/12182241-12182241 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.855136;DP=3041;DP4=1653,1310,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.78328e-09;MQSB=0.642765;RPB=0.721443;SGB=28.6195;VDB=0.97174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.8:12189695 chr08:012189695 0 W/12189695-12189695 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.458964;DP=5897;DP4=3243,2506,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0167882;MQB=0.980727;MQSB=0.0706386;RPB=0.989594;SGB=32.2261;VDB=0.622197;EFF=INTRON(MODIFIER||||907|LOC_Os08g20290|protein_coding|CODING|LOC_Os08g20290.1|1|1) FN1086-S.SNP.8:12190858 chr08:012190858 0 W/12190858-12190858 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1483-S.SNP.8:12191704 chr08:012191704 0 W/12191704-12191704 FN1483-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g20300 retrotransposon protein, putative, unclassified SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN3861-S.SNP.8:12202112 chr08:012202112 0 W/12202112-12202112 FN3861-S SNP T -> C AC=1;AN=158;BQB=0.786378;DP=2931;DP4=1221,1381,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=31;MQ0F=0.0835892;MQB=0.798034;MQSB=8.8033e-16;RPB=0.454544;SGB=26.1881;VDB=0.685994;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.8:12229231 chr08:012229231 0 W/12229231-12229231 FN893-S Single Base Substitution C-T INTERGENIC HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2754-S.SNP.8:12231705 chr08:012231705 0 W/12231705-12231705 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.746358;DP=5235;DP4=2701,2281,8,5;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.069723;MQB=0.999942;MQSB=2.50734e-40;RPB=0.641382;SGB=54.2646;VDB=0.0893694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R646Q|821|LOC_Os08g20359|protein_coding|CODING|LOC_Os08g20359.1|3|1) FN445-S.SNP.8:12231840 chr08:012231840 0 W/12231840-12231840 FN445-S Single Base Substitution T-C INTRON HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2325.SNP.8:12237068 chr08:012237068 0 W/12237068-12237068 FN2325 SNP C -> T AC=1;AN=192;BQB=0.750525;DP=8205;DP4=3339,4015,285,23;HOB=5.42535e-05;ICB=0.000109072;MQ=30;MQ0F=0.16429;MQB=0;MQSB=0.291454;RPB=5.60519e-45;SGB=-5610.7;VDB=1.85657e-39;EFF=INTRON(MODIFIER||||1844|LOC_Os08g20370|protein_coding|CODING|LOC_Os08g20370.1|1|1) FN1494-S.SNP.8:12237822 chr08:012237822 0 W/12237822-12237822 FN1494-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2357.SNP.8:12237964 chr08:012237964 0 W/12237964-12237964 FN2357 SNP T -> G AC=1;AN=192;BQB=0.999246;DP=7918;DP4=3944,2968,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0649154;MQB=0.976246;MQSB=0;RPB=0.981771;SGB=24.5626;VDB=0.998557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Gcc|S278A|1844|LOC_Os08g20370|protein_coding|CODING|LOC_Os08g20370.1|2|1) FN3057-S.SNP.8:12238062 chr08:012238062 0 W/12238062-12238062 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.507535;DP=5455;DP4=2545,2771,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0177819;MQB=0.885246;MQSB=6.29796e-07;RPB=0.150895;SGB=18.2315;VDB=0.334995;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D310|1844|LOC_Os08g20370|protein_coding|CODING|LOC_Os08g20370.1|2|1) FN-397.SNP.8:12246303 chr08:012246303 0 W/12246303-12246303 FN-397 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g20390 retrotransposon protein, putative, unclassified, expressed SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1442-S.SNP.8:12248210 chr08:012248210 0 W/12248210-12248210 FN1442-S Single Base Substitution A-G INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2735-S.SNP.8:12265008 chr08:012265008 0 W/12265008-12265008 FN2735-S SNP G -> C AC=1;AN=200;BQB=0.632122;DP=4532;DP4=2086,2161,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000441306;MQB=1.04298e-12;MQSB=0.902158;RPB=0.999143;SGB=19.1209;VDB=0.652896;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.8:12265008 chr08:012265008 0 W/12265008-12265008 FN4041-S SNP G -> C AC=2;AN=168;BQB=0.747175;DP=2687;DP4=1381,1104,20,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.7071e-18;MQSB=0.919687;RPB=0.988119;SGB=96.5026;VDB=0.426882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.8:12272649 chr08:012272649 0 W/12272649-12272649 FN1085-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3772-S.SNP.8:12274410 chr08:012274410 0 W/12274410-12274410 FN3772-S SNP A -> T AC=2;AN=190;BQB=0.885164;DP=2605;DP4=1422,1098,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.39315e-11;MQSB=0.999967;RPB=0.97405;SGB=94.6341;VDB=0.792586;EFF=INTRON(MODIFIER||||205|LOC_Os08g20440|protein_coding|CODING|LOC_Os08g20440.1|1|1),INTRON(MODIFIER||||205|LOC_Os08g20440|protein_coding|CODING|LOC_Os08g20440.2|1|1) FN1049-S.SNP.8:12278513 chr08:012278513 0 W/12278513-12278513 FN1049-S Single Base Substitution C-T INTERGENIC HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2129-S.SNP.8:12282589 chr08:012282589 0 W/12282589-12282589 FN2129-S SNP T -> C AC=1;AN=168;BQB=0.156216;DP=3244;DP4=1690,1497,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51921e-08;MQSB=0.999928;RPB=0.77808;SGB=-71.2065;VDB=0.413911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.8:12282952 chr08:012282952 0 W/12282952-12282952 FN3767-S SNP C -> T AC=2;AN=190;BQB=0.976915;DP=3088;DP4=1872,1093,19,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.15646e-20;MQSB=0.987715;RPB=0.848319;SGB=149.281;VDB=0.849299;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.8:12285357 chr08:012285357 0 W/12285357-12285357 FN1634-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1431-S.SNP.8:12292570 chr08:012292570 0 W/12292570-12292570 FN1431-S Single Base Substitution T-G INTRON HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN2375.SNP.8:12292876 chr08:012292876 0 W/12292876-12292876 FN2375 SNP C -> A AC=1;AN=192;BQB=0.467703;DP=5072;DP4=2379,2364,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.33337e-07;MQSB=0.822072;RPB=0.889199;SGB=36.2157;VDB=0.673381;EFF=INTRON(MODIFIER||||1103|LOC_Os08g20480|protein_coding|CODING|LOC_Os08g20480.1|18|1) FN1190-S.SNP.8:12294015 chr08:012294015 0 W/12294015-12294015 FN1190-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g20486 transposon protein, putative, unclassified, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1712-S.SNP.8:12298412 chr08:012298412 0 W/12298412-12298412 FN1712-S SNP T -> A AC=1;AN=188;BQB=0.0256147;DP=3876;DP4=2111,1725,17,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.08418e-10;MQSB=0.899917;RPB=0.827043;SGB=-9.56681;VDB=0.436415;EFF=INTRON(MODIFIER||||1132|LOC_Os08g20486|protein_coding|CODING|LOC_Os08g20486.1|2|1) FN486-S.SNP.8:12303359 chr08:012303359 0 W/12303359-12303359 FN486-S Single Base Substitution T-C INTERGENIC HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN832-S.SNP.8:12303498 chr08:012303498 0 W/12303498-12303498 FN832-S Single Base Substitution G-T INTERGENIC HOMO SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2411.SNP.8:12304288 chr08:012304288 0 W/12304288-12304288 FN2411 SNP A -> T AC=1;AN=200;BQB=0.991938;DP=3735;DP4=1262,2014,9,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000535475;MQB=1.3682e-05;MQSB=6.15407e-15;RPB=0.622713;SGB=77.2904;VDB=0.00234526;EFF=INTRON(MODIFIER||||401|LOC_Os08g20492|protein_coding|CODING|LOC_Os08g20492.1|3|1) W464-2-1.SNP.8:12306393 chr08:012306393 0 W/12306393-12306393 W464-2-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g20492 OsFBX285 - F-box domain containing protein, expressed SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-291.SNP.8:12311842 chr08:012311842 0 W/12311842-12311842 FN-291 Single Base Substitution G-T INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN-291.SNP.8:12311843 chr08:012311843 0 W/12311843-12311843 FN-291 Single Base Substitution C-G UTR_5_PRIME HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2546-S.SNP.8:12323234 chr08:012323234 0 W/12323234-12323234 FN2546-S SNP G -> T AC=1;AN=198;BQB=0.198669;DP=4145;DP4=1801,2087,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.51646e-08;MQSB=0.943391;RPB=0.993795;SGB=29.3443;VDB=0.305515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN-137 Single Base Substitution C-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1036-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN1036-S Single Base Substitution C-T INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1128-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN1128-S Single Base Substitution C-T INTERGENIC HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1368-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN1368-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1577-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN1577-S Single Base Substitution C-T INTERGENIC Homo SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1748-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN1748-S SNP C -> T AC=2;AN=188;BQB=0.568558;DP=3317;DP4=1828,1450,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.73302e-16;MQSB=0.890985;RPB=0.404249;SGB=54.0524;VDB=0.866521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN2230-S SNP C -> T AC=2;AN=190;BQB=0.618839;DP=4864;DP4=2256,2288,31,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000205592;MQB=2.02753e-30;MQSB=0.911037;RPB=0.599875;SGB=61.6046;VDB=0.680533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN2752-S SNP C -> T AC=2;AN=200;BQB=0.54821;DP=4887;DP4=2314,2315,16,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2557e-21;MQSB=0.989268;RPB=0.983797;SGB=78.9831;VDB=0.900429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN3331-S SNP C -> T AC=2;AN=184;BQB=0.521276;DP=2722;DP4=1177,1427,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.40701e-14;MQSB=0.979956;RPB=0.752921;SGB=98.4821;VDB=0.855166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN3501-S SNP C -> T AC=2;AN=188;BQB=0.977134;DP=2606;DP4=1174,1367,2,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.43737e-07;MQSB=0.900701;RPB=0.929408;SGB=39.8925;VDB=0.481016;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN354-S Single Base Substitution C-T INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3762-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN3762-S SNP C -> T AC=2;AN=190;BQB=0.999346;DP=2647;DP4=1129,1421,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14182e-12;MQSB=0.981141;RPB=0.887432;SGB=94.6341;VDB=0.255519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN3915-S SNP C -> T AC=2;AN=158;BQB=0.981716;DP=2390;DP4=1033,1255,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.05731e-13;MQSB=0.925001;RPB=0.41903;SGB=99.5005;VDB=0.663282;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN4129-S SNP C -> T AC=2;AN=182;BQB=0.919207;DP=2864;DP4=1254,1518,14,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.07707e-16;MQSB=0.974589;RPB=0.743768;SGB=77.758;VDB=0.340203;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN4143-S SNP C -> T AC=2;AN=170;BQB=0.923978;DP=2327;DP4=1034,1230,11,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.80002e-12;MQSB=0.997266;RPB=0.986189;SGB=96.7413;VDB=0.166683;EFF=INTERGENIC(MODIFIER||||||||||1) FN471-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN471-S Single Base Substitution C-T INTERGENIC HOMO SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN707-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN707-S Single Base Substitution C-T INTERGENIC HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN785-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN785-S Single Base Substitution C-T INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN811-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN811-S Single Base Substitution C-T INTERGENIC HOMO SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN925-S.SNP.8:12324413 chr08:012324413 0 W/12324413-12324413 FN925-S Single Base Substitution C-T INTERGENIC HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN981-S.SNP.8:12332270 chr08:012332270 0 W/12332270-12332270 FN981-S Single Base Substitution A-T INTRON HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN-248.SNP.8:12359704 chr08:012359704 0 W/12359704-12359704 FN-248 Single Base Substitution G-T INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3525-S.SNP.8:12361253 chr08:012361253 0 W/12361253-12361253 FN3525-S SNP C -> T AC=1;AN=188;BQB=0.888075;DP=2748;DP4=1501,1197,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000820684;MQSB=0.783827;RPB=0.866335;SGB=26.2637;VDB=0.274147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.8:12372464 chr08:012372464 0 W/12372464-12372464 FN1602-S Single Base Substitution G-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1179-S.SNP.8:12386789 chr08:012386789 0 W/12386789-12386789 FN1179-S Single Base Substitution A-G START_LOST HET LOC_Os08g20620 expressed protein SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN601-S.SNP.8:12389009 chr08:012389009 0 W/12389009-12389009 FN601-S Single Base Substitution C-A INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN693-S.SNP.8:12391654 chr08:012391654 0 W/12391654-12391654 FN693-S Single Base Substitution C-T INTERGENIC HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN1206-S.SNP.8:12392977 chr08:012392977 0 W/12392977-12392977 FN1206-S Single Base Substitution C-T INTERGENIC HET SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN-73.SNP.8:12393112 chr08:012393112 0 W/12393112-12393112 FN-73 Single Base Substitution T-G INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1372-S.SNP.8:12405113 chr08:012405113 0 W/12405113-12405113 FN1372-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1220-S.SNP.8:12409360 chr08:012409360 0 W/12409360-12409360 FN1220-S Single Base Substitution T-G INTERGENIC HET SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN2500.SNP.8:12434533 chr08:012434533 0 W/12434533-12434533 FN2500 SNP A -> T AC=1;AN=200;BQB=0.449152;DP=4287;DP4=1778,2061,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.10137e-08;MQSB=0.496523;RPB=0.902442;SGB=6.27959;VDB=0.599251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R318W|644|LOC_Os08g20690|protein_coding|CODING|LOC_Os08g20690.1|6|1) FN4037-S.SNP.8:12437179 chr08:012437179 0 W/12437179-12437179 FN4037-S SNP C -> T AC=1;AN=168;BQB=0.804067;DP=2301;DP4=1318,879,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.14199e-06;MQSB=0.841868;RPB=0.763119;SGB=55.3328;VDB=0.725715;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.8:12437652 chr08:012437652 0 W/12437652-12437652 FN4107-S SNP A -> T AC=1;AN=182;BQB=0.99101;DP=3386;DP4=1616,1704,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=30;MQ0F=0.0980508;MQB=0.836076;MQSB=0;RPB=0.995661;SGB=28.1658;VDB=0.290907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.8:12440875 chr08:012440875 0 W/12440875-12440875 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.90087;DP=5223;DP4=2446,2397,25,26;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00957304;MQB=3.68715e-18;MQSB=0.0119414;RPB=0.984032;SGB=4.50208;VDB=0.0466927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R370W|377|LOC_Os08g20700|protein_coding|CODING|LOC_Os08g20700.1|1|1) FN3776-S.SNP.8:12442166 chr08:012442166 0 W/12442166-12442166 FN3776-S SNP C -> G AC=1;AN=190;BQB=0.992504;DP=2542;DP4=1213,1263,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00393391;MQB=1.09574e-05;MQSB=0.676745;RPB=0.534082;SGB=44.5415;VDB=0.241135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.8:12449521 chr08:012449521 0 W/12449521-12449521 FN2723-S SNP T -> C AC=1;AN=200;BQB=0.684521;DP=4584;DP4=2252,2026,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15292e-09;MQSB=0.999369;RPB=0.854467;SGB=6.27959;VDB=0.779375;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L1059|1378|LOC_Os08g20720|protein_coding|CODING|LOC_Os08g20720.1|7|1) FN727-S.SNP.8:12450453 chr08:012450453 0 W/12450453-12450453 FN727-S Single Base Substitution T-C INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN860-S.SNP.8:12451354 chr08:012451354 0 W/12451354-12451354 FN860-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g20720 retrotransposon protein, putative, unclassified, expressed SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2417.SNP.8:12451600 chr08:012451600 0 W/12451600-12451600 FN2417 SNP T -> C AC=1;AN=200;BQB=0.89365;DP=4328;DP4=1959,2051,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91387e-11;MQSB=0.956375;RPB=0.927203;SGB=54.6902;VDB=0.124559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I609V|1378|LOC_Os08g20720|protein_coding|CODING|LOC_Os08g20720.1|4|1) W721-2-1.SNP.8:12452113 chr08:012452113 0 W/12452113-12452113 W721-2-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g20720 retrotransposon protein, putative, unclassified, expressed SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3802-S.SNP.8:12452971 chr08:012452971 0 W/12452971-12452971 FN3802-S SNP T -> A AC=1;AN=190;BQB=0.856241;DP=3964;DP4=1795,1995,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.91021e-06;MQSB=0.923114;RPB=0.586502;SGB=10.3266;VDB=0.0869745;EFF=INTRON(MODIFIER||||1378|LOC_Os08g20720|protein_coding|CODING|LOC_Os08g20720.1|2|1) FN2497.SNP.8:12454462 chr08:012454462 0 W/12454462-12454462 FN2497 SNP C -> T AC=1;AN=200;BQB=0.336509;DP=4176;DP4=2226,1706,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.17393e-07;MQSB=0.289933;RPB=0.998615;SGB=51.0851;VDB=0.0142656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.8:12470032 chr08:012470032 0 W/12470032-12470032 FN3966-S SNP C -> A AC=2;AN=168;BQB=0.75868;DP=2585;DP4=1200,1281,15,5;HOB=0.0235261;ICB=0.494119;MQ=34;MQ0F=0.113346;MQB=0.999457;MQSB=7.67805e-06;RPB=0.992297;SGB=58.7637;VDB=0.183457;EFF=SPLICE_SITE_DONOR(HIGH||||1289|LOC_Os08g20770|protein_coding|CODING|LOC_Os08g20770.1|2|1),INTRON(MODIFIER||||1289|LOC_Os08g20770|protein_coding|CODING|LOC_Os08g20770.1|2|1);LOF=(LOC_Os08g20770|LOC_Os08g20770|1|1.00) FN3998-S.SNP.8:12484542 chr08:012484542 0 W/12484542-12484542 FN3998-S SNP C -> G AC=2;AN=168;BQB=0.8926;DP=2338;DP4=887,1346,14,14;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0106929;MQB=0.186212;MQSB=0.00522772;RPB=0.869036;SGB=86.2102;VDB=0.522234;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.8:12485514 chr08:012485514 0 W/12485514-12485514 FN404-S Single Base Substitution G-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN404-S.SNP.8:12485515 chr08:012485515 0 W/12485515-12485515 FN404-S Single Base Substitution G-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN436-S.SNP.8:12485792 chr08:012485792 0 W/12485792-12485792 FN436-S Single Base Substitution C-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN626-S.SNP.8:12487405 chr08:012487405 0 W/12487405-12487405 FN626-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g20790 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1711-S.SNP.8:12488246 chr08:012488246 0 W/12488246-12488246 FN1711-S SNP C -> A AC=1;AN=188;BQB=0.92161;DP=2744;DP4=1405,1312,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0849125;MQB=0.22875;MQSB=0.00533066;RPB=0.77385;SGB=21.8113;VDB=0.742057;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G156*|830|LOC_Os08g20790|protein_coding|CODING|LOC_Os08g20790.1|1|1);LOF=(LOC_Os08g20790|LOC_Os08g20790|1|1.00);NMD=(LOC_Os08g20790|LOC_Os08g20790|1|1.00) FN1468-S.SNP.8:12488994 chr08:012488994 0 W/12488994-12488994 FN1468-S Single Base Substitution A-C SYNONYMOUS_CODING Homo SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN950-S.SNP.8:12491538 chr08:012491538 0 W/12491538-12491538 FN950-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g20800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN993-S.SNP.8:12493060 chr08:012493060 0 W/12493060-12493060 FN993-S Single Base Substitution T-C INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN1427-S.SNP.8:12495421 chr08:012495421 0 W/12495421-12495421 FN1427-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g20820 transposon protein, putative, unclassified SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2596-S.SNP.8:12501136 chr08:012501136 0 W/12501136-12501136 FN2596-S SNP T -> C AC=1;AN=198;BQB=0.867231;DP=4403;DP4=1878,2239,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.151261;MQB=0.952615;MQSB=0;RPB=0.221637;SGB=13.7737;VDB=0.424843;EFF=INTRON(MODIFIER||||348|LOC_Os08g20840|protein_coding|CODING|LOC_Os08g20840.1|1|1) FN2614-S.SNP.8:12502422 chr08:012502422 0 W/12502422-12502422 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.904927;DP=3692;DP4=1771,1717,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000270856;MQB=2.61815e-09;MQSB=0.299346;RPB=0.583639;SGB=65.3149;VDB=0.781225;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A275|348|LOC_Os08g20840|protein_coding|CODING|LOC_Os08g20840.1|2|1) FN978-S.SNP.8:12508393 chr08:012508393 0 W/12508393-12508393 FN978-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g20849 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3280-S.SNP.8:12509609 chr08:012509609 0 W/12509609-12509609 FN3280-S SNP C -> G AC=1;AN=184;BQB=0.999524;DP=4392;DP4=1639,2642,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.153689;MQB=0.79524;MQSB=2.34112e-12;RPB=0.927345;SGB=42.7914;VDB=0.582306;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R504|1804|LOC_Os08g20849|protein_coding|CODING|LOC_Os08g20849.1|3|1) FN3778-S.SNP.8:12516702 chr08:012516702 0 W/12516702-12516702 FN3778-S SNP G -> T AC=1;AN=190;BQB=0.183434;DP=2187;DP4=846,999,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.86359e-07;MQSB=0.79104;RPB=0.331871;SGB=-100.524;VDB=0.581467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2152-S.SNP.8:12519489 chr08:012519489 0 W/12519489-12519489 FN2152-S SNP T -> G AC=2;AN=168;BQB=0.025615;DP=3371;DP4=1791,1529,17,18;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0243251;MQB=0.109757;MQSB=3.36083e-07;RPB=0.363777;SGB=-284.023;VDB=0.677563;EFF=INTRON(MODIFIER||||521|LOC_Os08g20870|protein_coding|CODING|LOC_Os08g20870.1|2|1) FN4087-S.SNP.8:12522410 chr08:012522410 0 W/12522410-12522410 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.967415;DP=2723;DP4=1062,1560,1,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.10561e-06;MQSB=0.869233;RPB=0.806975;SGB=30.5793;VDB=0.403377;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.8:12522411 chr08:012522411 0 W/12522411-12522411 FN4087-S SNP T -> A AC=1;AN=182;BQB=0.984561;DP=2719;DP4=1073,1573,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.112e-06;MQSB=0.894808;RPB=0.778536;SGB=21.5845;VDB=0.273656;EFF=INTERGENIC(MODIFIER||||||||||1) W596-1-1.SNP.8:12526330 chr08:012526330 0 W/12526330-12526330 W596-1-1 Single Base Substitution G-C INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN3658-S.SNP.8:12527054 chr08:012527054 0 W/12527054-12527054 FN3658-S SNP G -> T AC=1;AN=190;BQB=0.930338;DP=2803;DP4=1305,1356,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000158557;MQSB=0.537749;RPB=0.957622;SGB=26.3271;VDB=0.984456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W7C|155|LOC_Os08g20885|protein_coding|CODING|LOC_Os08g20885.1|1|1) FN-285.SNP.8:12527366 chr08:012527366 0 W/12527366-12527366 FN-285 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g20885 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-285.SNP.8:12527367 chr08:012527367 0 W/12527367-12527367 FN-285 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN819-S.SNP.8:12530651 chr08:012530651 0 W/12530651-12530651 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN874-S.SNP.8:12530941 chr08:012530941 0 W/12530941-12530941 FN874-S Single Base Substitution T-G INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN500-S.SNP.8:12532302 chr08:012532302 0 W/12532302-12532302 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-290.SNP.8:12549010 chr08:012549010 0 W/12549010-12549010 FN-290 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g20952 retrotransposon protein, putative, unclassified SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN512-S.SNP.8:12549247 chr08:012549247 0 W/12549247-12549247 FN512-S Single Base Substitution C-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN4050-S.SNP.8:12550635 chr08:012550635 0 W/12550635-12550635 FN4050-S SNP G -> A AC=1;AN=168;BQB=0.678311;DP=3957;DP4=1085,2592,8,22;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0222391;MQB=0.00788407;MQSB=6.71811e-41;RPB=0.767526;SGB=127.497;VDB=0.652548;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.8:12561366 chr08:012561366 0 W/12561366-12561366 FN547-S Single Base Substitution G-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3501-S.SNP.8:12564153 chr08:012564153 0 W/12564153-12564153 FN3501-S SNP T -> A AC=1;AN=188;BQB=0.947118;DP=3701;DP4=1839,1669,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65815e-07;MQSB=0.88446;RPB=0.999568;SGB=35.9843;VDB=0.747745;EFF=INTERGENIC(MODIFIER||||||||||1) FN-336.SNP.8:12564748 chr08:012564748 0 W/12564748-12564748 FN-336 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g21000 retrotransposon protein, putative, unclassified, expressed SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN3508-S.SNP.8:12564910 chr08:012564910 0 W/12564910-12564910 FN3508-S SNP G -> T AC=1;AN=188;BQB=0.907655;DP=4085;DP4=1949,2066,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.33698e-10;MQSB=0.961178;RPB=0.561424;SGB=80.782;VDB=0.811271;EFF=INTRON(MODIFIER||||490|LOC_Os08g21000|protein_coding|CODING|LOC_Os08g21000.1|1|1) W607-2-1.SNP.8:12564910 chr08:012564910 0 W/12564910-12564910 W607-2-1 Single Base Substitution G-T INTRON HOMO SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-163.SNP.8:12569687 chr08:012569687 0 W/12569687-12569687 FN-163 Single Base Substitution G-A INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN3446-S.SNP.8:12578883 chr08:012578883 0 W/12578883-12578883 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.560962;DP=2739;DP4=1379,1291,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.125593;MQB=0.85575;MQSB=6.83579e-16;RPB=0.547745;SGB=15.9331;VDB=0.757493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A357V|421|LOC_Os08g21030|protein_coding|CODING|LOC_Os08g21030.1|1|1) FN1709-S.SNP.8:12587533 chr08:012587533 0 W/12587533-12587533 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.462645;DP=3812;DP4=1759,2007,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=18;MQ0F=0.35021;MQB=0.195542;MQSB=5.27444e-07;RPB=0.869175;SGB=-91.3539;VDB=0.611208;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W183*|205|LOC_Os08g21050|protein_coding|CODING|LOC_Os08g21050.1|2|1) FN3452-S.SNP.8:12594197 chr08:012594197 0 W/12594197-12594197 FN3452-S SNP G -> C AC=1;AN=184;BQB=0.995006;DP=2752;DP4=1384,1314,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.71099e-05;MQSB=0.962164;RPB=0.786961;SGB=26.1347;VDB=0.977871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tCc|C450S|525|LOC_Os08g21060|protein_coding|CODING|LOC_Os08g21060.1|4|1) FN1150-S.SNP.8:12594498 chr08:012594498 0 W/12594498-12594498 FN1150-S Single Base Substitution G-C INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN456-S.SNP.8:12594922 chr08:012594922 0 W/12594922-12594922 FN456-S Single Base Substitution G-C INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN3965-S.SNP.8:12596730 chr08:012596730 0 W/12596730-12596730 FN3965-S SNP A -> G AC=1;AN=168;BQB=0.762389;DP=2135;DP4=873,1094,5,15;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0252927;MQB=0.105402;MQSB=0.514402;RPB=0.958477;SGB=9.91396;VDB=0.920642;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.8:12599853 chr08:012599853 0 W/12599853-12599853 FN3115-S SNP G -> C AC=1;AN=184;BQB=0.814442;DP=2517;DP4=1161,1249,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.50032e-05;MQSB=0.660509;RPB=0.829713;SGB=20.7533;VDB=0.863595;EFF=INTERGENIC(MODIFIER||||||||||1) 701-6.SNP.8:12605135 chr08:012605135 0 W/12605135-12605135 701-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN1536-S.SNP.8:12612786 chr08:012612786 0 W/12612786-12612786 FN1536-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN-135.SNP.8:12614895 chr08:012614895 0 W/12614895-12614895 FN-135 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN1363-S.SNP.8:12618391 chr08:012618391 0 W/12618391-12618391 FN1363-S Single Base Substitution G-A INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN4020-S.SNP.8:12619686 chr08:012619686 0 W/12619686-12619686 FN4020-S SNP G -> A AC=1;AN=168;BQB=0.972389;DP=2939;DP4=1273,1527,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000340252;MQB=2.35477e-12;MQSB=0.841346;RPB=0.936796;SGB=109.773;VDB=0.437998;EFF=INTRON(MODIFIER||||2038|LOC_Os08g21110|protein_coding|CODING|LOC_Os08g21110.1|1|1) FN-188.SNP.8:12628577 chr08:012628577 0 W/12628577-12628577 FN-188 Single Base Substitution G-A INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3387-S.SNP.8:12628745 chr08:012628745 0 W/12628745-12628745 FN3387-S SNP C -> G AC=1;AN=184;BQB=0.984844;DP=2627;DP4=1081,1452,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.73888e-05;MQSB=0.824297;RPB=0.865908;SGB=39.699;VDB=0.0209797;EFF=INTRON(MODIFIER||||1002|LOC_Os08g21124|protein_coding|CODING|LOC_Os08g21124.1|3|1) FN1463-S.SNP.8:12628816 chr08:012628816 0 W/12628816-12628816 FN1463-S Single Base Substitution G-A INTRON HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3530-S.SNP.8:12636962 chr08:012636962 0 W/12636962-12636962 FN3530-S SNP T -> A AC=2;AN=188;BQB=0.991642;DP=2708;DP4=1465,1121,25,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.71657e-25;MQSB=0.987859;RPB=0.999883;SGB=154.316;VDB=0.926674;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K441I|557|LOC_Os08g21140|protein_coding|CODING|LOC_Os08g21140.1|5|1) FN3530-S.SNP.8:12636963 chr08:012636963 0 W/12636963-12636963 FN3530-S SNP T -> C AC=2;AN=188;BQB=0.951062;DP=2720;DP4=1490,1147,25,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.54698e-25;MQSB=0.981478;RPB=0.940004;SGB=179.797;VDB=0.872967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K441E|557|LOC_Os08g21140|protein_coding|CODING|LOC_Os08g21140.1|5|1) FN-71.SNP.8:12637664 chr08:012637664 0 W/12637664-12637664 FN-71 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g21140 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN547-S.SNP.8:12640248 chr08:012640248 0 W/12640248-12640248 FN547-S Single Base Substitution C-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN-235.SNP.8:12640991 chr08:012640991 0 W/12640991-12640991 FN-235 Single Base Substitution A-G INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN727-S.SNP.8:12647656 chr08:012647656 0 W/12647656-12647656 FN727-S Single Base Substitution T-C INTRON HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN-79.SNP.8:12651862 chr08:012651862 0 W/12651862-12651862 FN-79 Single Base Substitution T-A INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN883-S.SNP.8:12652696 chr08:012652696 0 W/12652696-12652696 FN883-S Single Base Substitution G-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1633-S.SNP.8:12656961 chr08:012656961 0 W/12656961-12656961 FN1633-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g21200 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3934-S.SNP.8:12662139 chr08:012662139 0 W/12662139-12662139 FN3934-S SNP T -> C AC=1;AN=158;BQB=0.805249;DP=2320;DP4=1047,1132,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.99743e-08;MQSB=0.0112519;RPB=0.818015;SGB=23.8187;VDB=0.880557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E642G|848|LOC_Os08g21210|protein_coding|CODING|LOC_Os08g21210.1|5|1) FN1402-S.SNP.8:12662237 chr08:012662237 0 W/12662237-12662237 FN1402-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2177-S.SNP.8:12664729 chr08:012664729 0 W/12664729-12664729 FN2177-S SNP G -> C AC=1;AN=168;BQB=0.00132647;DP=3302;DP4=1599,1639,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000605693;MQB=1.54195e-05;MQSB=0.915734;RPB=0.968272;SGB=-60.2222;VDB=0.966297;EFF=INTRON(MODIFIER||||848|LOC_Os08g21210|protein_coding|CODING|LOC_Os08g21210.1|2|1) FN2684-S.SNP.8:12670755 chr08:012670755 0 W/12670755-12670755 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.121676;DP=9362;DP4=4154,4625,17,10;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0511643;MQB=0.999658;MQSB=0.00200898;RPB=0.745357;SGB=-70.864;VDB=0.14278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M1255K|2027|LOC_Os08g21220|protein_coding|CODING|LOC_Os08g21220.1|2|1) FN2241-S.SNP.8:12674318 chr08:012674318 0 W/12674318-12674318 FN2241-S SNP C -> G AC=2;AN=190;BQB=0.962516;DP=4097;DP4=1902,1931,2,9;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.0947034;MQB=0.93878;MQSB=0;RPB=0.324697;SGB=44.5415;VDB=0.712309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E841D|1049|LOC_Os08g21230|protein_coding|CODING|LOC_Os08g21230.1|3|1) FN1184-S.SNP.8:12678922 chr08:012678922 0 W/12678922-12678922 FN1184-S Single Base Substitution T-C INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2169-S.SNP.8:12681688 chr08:012681688 0 W/12681688-12681688 FN2169-S SNP T -> A AC=1;AN=168;BQB=0.0766866;DP=3862;DP4=1706,2106,14,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.02069e-12;MQSB=0.816564;RPB=0.918858;SGB=-155.04;VDB=0.574591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.8:12685779 chr08:012685779 0 W/12685779-12685779 FN2499 SNP G -> A AC=2;AN=200;BQB=0.0680291;DP=4385;DP4=1990,2044,23,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.0826e-17;MQSB=0.865847;RPB=0.0202024;SGB=39.9882;VDB=0.382412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.8:12687840 chr08:012687840 0 W/12687840-12687840 FN1327-S Single Base Substitution C-A INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN1327-S.SNP.8:12687841 chr08:012687841 0 W/12687841-12687841 FN1327-S Single Base Substitution A-T INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3400-S.SNP.8:12688921 chr08:012688921 0 W/12688921-12688921 FN3400-S SNP T -> A AC=2;AN=184;BQB=0.847649;DP=2371;DP4=1022,1186,6,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.03956e-09;MQSB=0.94659;RPB=0.358702;SGB=53.3568;VDB=0.112499;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.8:12695180 chr08:012695180 0 W/12695180-12695180 FN-249 Single Base Substitution C-T INTERGENIC HOMO SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN1549-S.SNP.8:12696041 chr08:012696041 0 W/12696041-12696041 FN1549-S Single Base Substitution T-C INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN4144-S.SNP.8:12696083 chr08:012696083 0 W/12696083-12696083 FN4144-S SNP C -> G AC=2;AN=170;BQB=0.854321;DP=2498;DP4=1396,1038,12,9;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00720576;MQB=0.00268188;MQSB=0.999548;RPB=0.998023;SGB=87.856;VDB=0.339047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.8:12696462 chr08:012696462 0 W/12696462-12696462 FN2660-S SNP T -> C AC=2;AN=200;BQB=0.528397;DP=4707;DP4=2371,2122,1,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000849798;MQB=0.00595215;MQSB=0.0590158;RPB=0.0198281;SGB=12.7003;VDB=0.114584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.8:12700390 chr08:012700390 0 W/12700390-12700390 FN3599-S SNP A -> G AC=1;AN=188;BQB=0.996254;DP=2974;DP4=1380,1510,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.39905e-12;MQSB=0.973062;RPB=0.813053;SGB=89.8686;VDB=0.407714;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N641|1249|LOC_Os08g21280|protein_coding|CODING|LOC_Os08g21280.1|1|1) FN2183-S.SNP.8:12701925 chr08:012701925 0 W/12701925-12701925 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.109738;DP=4572;DP4=2062,2243,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08373e-13;MQSB=0.993974;RPB=0.759719;SGB=49.1985;VDB=0.345392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H130Y|1249|LOC_Os08g21280|protein_coding|CODING|LOC_Os08g21280.1|1|1) FN724-S.SNP.8:12702679 chr08:012702679 0 W/12702679-12702679 FN724-S Single Base Substitution C-T INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1547-S.SNP.8:12707145 chr08:012707145 0 W/12707145-12707145 FN1547-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g21300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN2788-S.SNP.8:12709615 chr08:012709615 0 W/12709615-12709615 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.781579;DP=3388;DP4=1773,1372,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02314e-09;MQSB=0.00202612;RPB=0.902708;SGB=29.3443;VDB=0.348183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.8:12712852 chr08:012712852 0 W/12712852-12712852 FN1048-S Single Base Substitution T-C INTRON HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN-236.SNP.8:12722065 chr08:012722065 0 W/12722065-12722065 FN-236 Single Base Substitution A-T INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1380-S.SNP.8:12728381 chr08:012728381 0 W/12728381-12728381 FN1380-S Single Base Substitution G-C INTRON HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1065-S.SNP.8:12733247 chr08:012733247 0 W/12733247-12733247 FN1065-S Single Base Substitution C-A INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2356.SNP.8:12736778 chr08:012736778 0 W/12736778-12736778 FN2356 SNP C -> T AC=2;AN=192;BQB=0.852719;DP=4904;DP4=1987,2544,23,25;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00122349;MQB=9.14291e-21;MQSB=0.208614;RPB=0.622695;SGB=3.29047;VDB=0.890544;EFF=INTRON(MODIFIER||||1735|LOC_Os08g21360|protein_coding|CODING|LOC_Os08g21360.1|1|1) FN1655-S.SNP.8:12738816 chr08:012738816 0 W/12738816-12738816 FN1655-S Single Base Substitution T-A INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1655-S.SNP.8:12738818 chr08:012738818 0 W/12738818-12738818 FN1655-S Single Base Substitution G-A INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN757-S.SNP.8:12739163 chr08:012739163 0 W/12739163-12739163 FN757-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g21360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3974-S.SNP.8:12743179 chr08:012743179 0 W/12743179-12743179 FN3974-S SNP G -> T AC=1;AN=168;BQB=0.712525;DP=3198;DP4=1588,1497,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.165103;MQB=0.986308;MQSB=0.280311;RPB=0.93828;SGB=27.0464;VDB=0.957322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1288L|1735|LOC_Os08g21360|protein_coding|CODING|LOC_Os08g21360.1|4|1) FN3857-S.SNP.8:12751493 chr08:012751493 0 W/12751493-12751493 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.988492;DP=2005;DP4=1012,888,3,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.000498753;MQB=0.0222582;MQSB=0.728333;RPB=0.20466;SGB=51.4366;VDB=0.281535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A40T|385|LOC_Os08g21370|protein_coding|CODING|LOC_Os08g21370.1|1|1) FN1202-S.SNP.8:12754834 chr08:012754834 0 W/12754834-12754834 FN1202-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g21380 retrotransposon protein, putative, unclassified, expressed SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3854-S.SNP.8:12756136 chr08:012756136 0 W/12756136-12756136 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.935962;DP=2337;DP4=1139,1137,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0132649;MQB=4.16138e-06;MQSB=0.737898;RPB=0.623937;SGB=51.4366;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1089W|1573|LOC_Os08g21380|protein_coding|CODING|LOC_Os08g21380.1|5|1) FN747-S.SNP.8:12761084 chr08:012761084 0 W/12761084-12761084 FN747-S Single Base Substitution C-A INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN-170.SNP.8:12761266 chr08:012761266 0 W/12761266-12761266 FN-170 Single Base Substitution C-T INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3800-S.SNP.8:12771501 chr08:012771501 0 W/12771501-12771501 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.491369;DP=2800;DP4=1565,1108,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000357143;MQB=3.07671e-10;MQSB=0.991969;RPB=0.893776;SGB=8.77275;VDB=0.821174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.8:12771736 chr08:012771736 0 W/12771736-12771736 FN1504-S Single Base Substitution T-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN4147-S.SNP.8:12784590 chr08:012784590 0 W/12784590-12784590 FN4147-S SNP A -> G AC=1;AN=170;BQB=0.846158;DP=2507;DP4=1177,1204,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0283207;MQB=0.000220015;MQSB=0.475298;RPB=0.999996;SGB=47.8722;VDB=0.286182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.8:12785019 chr08:012785019 0 W/12785019-12785019 FN1112-S Single Base Substitution G-A INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1319-S.SNP.8:12786171 chr08:012786171 0 W/12786171-12786171 FN1319-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN621-S.SNP.8:12790588 chr08:012790588 0 W/12790588-12790588 FN621-S Single Base Substitution C-T INTRON HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3863-S.SNP.8:12793387 chr08:012793387 0 W/12793387-12793387 FN3863-S SNP C -> T AC=2;AN=158;BQB=0.809478;DP=2213;DP4=1099,1045,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.16366e-12;MQSB=0.996471;RPB=0.302239;SGB=86.3921;VDB=0.606386;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S772F|903|LOC_Os08g21460|protein_coding|CODING|LOC_Os08g21460.1|5|1) FN2401.SNP.8:12795536 chr08:012795536 0 W/12795536-12795536 FN2401 SNP G -> A AC=1;AN=200;BQB=0.541488;DP=4651;DP4=2246,2055,17,18;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=9.80062e-08;MQSB=0.118627;RPB=0.996059;SGB=-2.82234;VDB=0.451453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.8:12797772 chr08:012797772 0 W/12797772-12797772 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.564674;DP=3886;DP4=2210,1502,17,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.29553e-09;MQSB=1.60726e-35;RPB=0.870225;SGB=95.6183;VDB=0.839591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.8:12803875 chr08:012803875 0 W/12803875-12803875 FN3563-S SNP A -> T AC=1;AN=188;BQB=0.844294;DP=3323;DP4=1649,1579,16,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.35079e-14;MQSB=0.471902;RPB=0.98713;SGB=94.4119;VDB=0.946831;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N289Y|592|LOC_Os08g21480|protein_coding|CODING|LOC_Os08g21480.1|2|1) FN3412-S.SNP.8:12803920 chr08:012803920 0 W/12803920-12803920 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.90399;DP=3325;DP4=1538,1665,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38554e-08;MQSB=0.72918;RPB=0.703884;SGB=42.7914;VDB=0.729547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D304N|592|LOC_Os08g21480|protein_coding|CODING|LOC_Os08g21480.1|2|1) FN2342.SNP.8:12806058 chr08:012806058 0 W/12806058-12806058 FN2342 SNP G -> A AC=1;AN=192;BQB=0.642908;DP=4911;DP4=2404,2268,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203625;MQB=1.79059e-10;MQSB=0.970834;RPB=0.527664;SGB=13.6122;VDB=0.563199;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G592D|592|LOC_Os08g21480|protein_coding|CODING|LOC_Os08g21480.1|5|1) FN3746-S.SNP.8:12808071 chr08:012808071 0 W/12808071-12808071 FN3746-S SNP C -> G AC=1;AN=190;BQB=0.926154;DP=2607;DP4=1322,1206,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42575e-08;MQSB=0.988782;RPB=0.999633;SGB=53.6492;VDB=0.752305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G405A|825|LOC_Os08g21490|protein_coding|CODING|LOC_Os08g21490.1|3|1) FN2494.SNP.8:12812396 chr08:012812396 0 W/12812396-12812396 FN2494 SNP C -> T AC=1;AN=200;BQB=0.201806;DP=4314;DP4=1842,2216,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94027e-07;MQSB=0.296966;RPB=0.991446;SGB=-35.3156;VDB=0.627039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3822-S.SNP.8:12818162 chr08:012818162 0 W/12818162-12818162 FN3822-S SNP G -> A AC=1;AN=190;BQB=0.988093;DP=3454;DP4=1777,1549,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.121019;MQB=0.766841;MQSB=0.000411632;RPB=0.844699;SGB=35.4339;VDB=0.785665;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.8:12822436 chr08:012822436 0 W/12822436-12822436 FN1421-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g21520 retrotransposon protein, putative, unclassified SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3575-S.SNP.8:12822436 chr08:012822436 0 W/12822436-12822436 FN3575-S SNP C -> A AC=2;AN=188;BQB=0.990519;DP=2751;DP4=1298,1362,12,17;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0287168;MQB=0.0837736;MQSB=0.0504867;RPB=0.930912;SGB=126.215;VDB=0.873191;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S82Y|378|LOC_Os08g21520|protein_coding|CODING|LOC_Os08g21520.1|1|1) FN3733-S.SNP.8:12822436 chr08:012822436 0 W/12822436-12822436 FN3733-S SNP C -> A AC=2;AN=190;BQB=0.933758;DP=2912;DP4=1350,1426,9,12;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0267857;MQB=0.0629328;MQSB=0.161572;RPB=0.911518;SGB=90.0802;VDB=0.357253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S82Y|378|LOC_Os08g21520|protein_coding|CODING|LOC_Os08g21520.1|1|1) FN3902-S.SNP.8:12822436 chr08:012822436 0 W/12822436-12822436 FN3902-S SNP C -> A AC=2;AN=158;BQB=0.972453;DP=2347;DP4=1111,1124,18,14;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0311035;MQB=0.0841317;MQSB=0.000131933;RPB=0.981911;SGB=98.093;VDB=0.142354;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S82Y|378|LOC_Os08g21520|protein_coding|CODING|LOC_Os08g21520.1|1|1) FN2397.SNP.8:12823896 chr08:012823896 0 W/12823896-12823896 FN2397 SNP A -> T AC=1;AN=200;BQB=0.606269;DP=3624;DP4=1457,1770,6,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.19197e-05;MQSB=0.744523;RPB=0.873722;SGB=-16.1361;VDB=0.963016;EFF=INTRON(MODIFIER||||378|LOC_Os08g21520|protein_coding|CODING|LOC_Os08g21520.1|1|1) FN2260-S.SNP.8:12827599 chr08:012827599 0 W/12827599-12827599 FN2260-S SNP G -> A AC=1;AN=190;BQB=0.927257;DP=5177;DP4=2594,2178,16,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193162;MQB=2.161e-16;MQSB=0.474061;RPB=0.974974;SGB=144.727;VDB=0.24499;EFF=INTERGENIC(MODIFIER||||||||||1) FN1531-S.SNP.8:12832522 chr08:012832522 0 W/12832522-12832522 FN1531-S Single Base Substitution C-A INTRON Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1697-S.SNP.8:12833719 chr08:012833719 0 W/12833719-12833719 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.946427;DP=3924;DP4=1822,2066,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00382263;MQB=1.3401e-06;MQSB=0.00259207;RPB=0.993907;SGB=-98.724;VDB=0.836042;EFF=UTR_3_PRIME(MODIFIER||1623||107|LOC_Os08g21541|protein_coding|CODING|LOC_Os08g21541.1|4|1) FN2212-S.SNP.8:12840048 chr08:012840048 0 W/12840048-12840048 FN2212-S SNP T -> G AC=1;AN=190;BQB=0.757159;DP=4715;DP4=2270,1999,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72488e-11;MQSB=0.155595;RPB=0.817697;SGB=22.7576;VDB=0.186967;EFF=INTRON(MODIFIER||||199|LOC_Os08g21554|protein_coding|CODING|LOC_Os08g21554.1|2|1) FN-96.SNP.8:12840554 chr08:012840554 0 W/12840554-12840554 FN-96 Single Base Substitution T-C INTRON HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN1356-S.SNP.8:12846378 chr08:012846378 0 W/12846378-12846378 FN1356-S Single Base Substitution T-G INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN-274.SNP.8:12848467 chr08:012848467 0 W/12848467-12848467 FN-274 Single Base Substitution T-C INTRON HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4234-S.SNP.8:12851362 chr08:012851362 0 W/12851362-12851362 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.925519;DP=2668;DP4=1240,1333,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.56768e-06;MQSB=0.999947;RPB=0.70454;SGB=43.4296;VDB=0.545839;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.8:12855697 chr08:012855697 0 W/12855697-12855697 FN433-S Single Base Substitution G-A INTRON HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN3429-S.SNP.8:12863629 chr08:012863629 0 W/12863629-12863629 FN3429-S SNP C -> T AC=2;AN=184;BQB=0.998206;DP=2562;DP4=1301,1193,6,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.59914e-08;MQSB=0.975188;RPB=0.993182;SGB=53.2642;VDB=0.457171;EFF=INTRON(MODIFIER||||827|LOC_Os08g21590|protein_coding|CODING|LOC_Os08g21590.1|9|1),INTRON(MODIFIER||||827|LOC_Os08g21590|protein_coding|CODING|LOC_Os08g21590.2|7|1) FN4121-S.SNP.8:12864007 chr08:012864007 0 W/12864007-12864007 FN4121-S SNP T -> A AC=2;AN=182;BQB=0.601338;DP=2801;DP4=1331,1367,12,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.29522e-11;MQSB=0.999011;RPB=0.350244;SGB=45.7418;VDB=0.217505;EFF=INTRON(MODIFIER||||827|LOC_Os08g21590|protein_coding|CODING|LOC_Os08g21590.1|9|1),INTRON(MODIFIER||||827|LOC_Os08g21590|protein_coding|CODING|LOC_Os08g21590.2|7|1) FN3815-S.SNP.8:12878585 chr08:012878585 0 W/12878585-12878585 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.973503;DP=2528;DP4=1276,1137,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000333807;MQSB=0.571623;RPB=0.225193;SGB=21.7749;VDB=0.138089;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.8:12885522 chr08:012885522 0 W/12885522-12885522 FN-59 Single Base Substitution C-T INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3450-S.SNP.8:12886518 chr08:012886518 0 W/12886518-12886518 FN3450-S SNP C -> T AC=1;AN=184;BQB=0.991855;DP=2474;DP4=1083,1267,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50289e-06;MQSB=0.749032;RPB=0.505962;SGB=39.699;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.8:12887701 chr08:012887701 0 W/12887701-12887701 FN2779-S SNP A -> G AC=2;AN=198;BQB=0.375448;DP=4754;DP4=2227,2297,33,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.92055e-24;MQSB=0.687071;RPB=0.464565;SGB=125.364;VDB=0.790314;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.8:12895314 chr08:012895314 0 W/12895314-12895314 FN731-S Single Base Substitution A-T INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN1064-S.SNP.8:12896327 chr08:012896327 0 W/12896327-12896327 FN1064-S Single Base Substitution G-A INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1461-S.SNP.8:12902024 chr08:012902024 0 W/12902024-12902024 FN1461-S Single Base Substitution T-C INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN-97.SNP.8:12903501 chr08:012903501 0 W/12903501-12903501 FN-97 Single Base Substitution G-T INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN836-S.SNP.8:12915399 chr08:012915399 0 W/12915399-12915399 FN836-S Single Base Substitution G-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1261-S.SNP.8:12915411 chr08:012915411 0 W/12915411-12915411 FN1261-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN-228.SNP.8:12917824 chr08:012917824 0 W/12917824-12917824 FN-228 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g21680 retrotransposon, putative, centromere-specific, expressed SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1094-S.SNP.8:12940485 chr08:012940485 0 W/12940485-12940485 FN1094-S Single Base Substitution C-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1415-S.SNP.8:12951652 chr08:012951652 0 W/12951652-12951652 FN1415-S Single Base Substitution T-C INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN989-S.SNP.8:12954343 chr08:012954343 0 W/12954343-12954343 FN989-S Single Base Substitution C-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN577-S.SNP.8:12962956 chr08:012962956 0 W/12962956-12962956 FN577-S Single Base Substitution A-G INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3781-S.SNP.8:12966198 chr08:012966198 0 W/12966198-12966198 FN3781-S SNP A -> C AC=1;AN=190;BQB=0.910319;DP=3388;DP4=1582,1410,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00265643;MQB=0.000265911;MQSB=0.0467922;RPB=0.179511;SGB=-13.222;VDB=0.122931;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.8:12967636 chr08:012967636 0 W/12967636-12967636 FN986-S Single Base Substitution C-G INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1916.SNP.8:12970601 chr08:012970601 0 W/12970601-12970601 FN1916 Single Base Substitution A-G HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2083-S.SNP.8:12995045 chr08:012995045 0 W/12995045-12995045 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.00288977;DP=5976;DP4=2994,2491,113,250;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.0813253;MQB=0;MQSB=0.176894;RPB=0;SGB=-4799.99;VDB=4.44335e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.8:13004324 chr08:013004324 0 W/13004324-13004324 FN1421-S Single Base Substitution C-A INTRON HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1332-S.SNP.8:13005131 chr08:013005131 0 W/13005131-13005131 FN1332-S Single Base Substitution G-A INTRON HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3819-S.SNP.8:13007144 chr08:013007144 0 W/13007144-13007144 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.676839;DP=2465;DP4=1361,1040,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0681542;MQB=0.085386;MQSB=2.65662e-05;RPB=0.88448;SGB=58.2031;VDB=0.595914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.8:13007215 chr08:013007215 0 W/13007215-13007215 FN2649-S SNP T -> C AC=1;AN=200;BQB=0.562555;DP=4383;DP4=2005,2018,24,18;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0335387;MQB=0.221448;MQSB=3.90809e-12;RPB=0.814227;SGB=1.41385;VDB=0.763857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.8:13023237 chr08:013023237 0 W/13023237-13023237 FN2740-S SNP T -> C AC=2;AN=200;BQB=0.504331;DP=4355;DP4=2051,2003,21,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.6718e-20;MQSB=0.953895;RPB=0.999621;SGB=84.1935;VDB=0.170339;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S121P|368|LOC_Os08g21740|protein_coding|CODING|LOC_Os08g21740.1|3|1) FN833-S.SNP.8:13024832 chr08:013024832 0 W/13024832-13024832 FN833-S Single Base Substitution G-C INTERGENIC HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1760-S.SNP.8:13025674 chr08:013025674 0 W/13025674-13025674 FN1760-S SNP T -> A AC=1;AN=188;BQB=1.76476e-05;DP=3182;DP4=1329,1781,16,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0355851;MQSB=0.437367;RPB=0.796892;SGB=-259.038;VDB=0.0735509;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.8:13026774 chr08:013026774 0 W/13026774-13026774 FN411-S Single Base Substitution T-C INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1463-S.SNP.8:13034032 chr08:013034032 0 W/13034032-13034032 FN1463-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3308-S.SNP.8:13036320 chr08:013036320 0 W/13036320-13036320 FN3308-S SNP T -> A AC=1;AN=184;BQB=0.996719;DP=4023;DP4=1320,2507,18,18;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.386776;MQB=0.000282706;MQSB=0;RPB=0.0844933;SGB=35.7163;VDB=0.047874;EFF=INTRON(MODIFIER||||259|LOC_Os08g21770|protein_coding|CODING|LOC_Os08g21770.1|2|1) FN3526-S.SNP.8:13038161 chr08:013038161 0 W/13038161-13038161 FN3526-S SNP T -> C AC=1;AN=188;BQB=0.966709;DP=2577;DP4=1263,1248,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69362e-06;MQSB=0.923699;RPB=0.902868;SGB=35.3493;VDB=0.300288;EFF=INTRON(MODIFIER||||259|LOC_Os08g21770|protein_coding|CODING|LOC_Os08g21770.1|1|1) FN3526-S.SNP.8:13038162 chr08:013038162 0 W/13038162-13038162 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.987504;DP=2569;DP4=1272,1246,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.84027e-06;MQSB=0.93882;RPB=0.938192;SGB=21.8113;VDB=0.305409;EFF=INTRON(MODIFIER||||259|LOC_Os08g21770|protein_coding|CODING|LOC_Os08g21770.1|1|1) FN3105-S.SNP.8:13040340 chr08:013040340 0 W/13040340-13040340 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.935441;DP=3556;DP4=1781,1599,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00140607;MQB=2.20913e-05;MQSB=0.0117383;RPB=0.989982;SGB=35.1773;VDB=0.464746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.8:13046817 chr08:013046817 0 W/13046817-13046817 FN1477-S Single Base Substitution C-T INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2607-S.SNP.8:13047851 chr08:013047851 0 W/13047851-13047851 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.428399;DP=4207;DP4=1638,2381,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.19816e-05;MQSB=0.745219;RPB=0.782479;SGB=49.5489;VDB=0.441617;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A1098|1205|LOC_Os08g21800|protein_coding|CODING|LOC_Os08g21800.1|4|1) FN1429-S.SNP.8:13060568 chr08:013060568 0 W/13060568-13060568 FN1429-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1076-S.SNP.8:13068842 chr08:013068842 0 W/13068842-13068842 FN1076-S Single Base Substitution C-A INTERGENIC HOMO SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2709-S.SNP.8:13069668 chr08:013069668 0 W/13069668-13069668 FN2709-S SNP A -> T AC=1;AN=200;BQB=0.810479;DP=4935;DP4=2655,2056,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00101317;MQB=7.321e-11;MQSB=0.858836;RPB=0.501962;SGB=86.5007;VDB=0.791616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.8:13070965 chr08:013070965 0 W/13070965-13070965 FN3630-S SNP G -> T AC=1;AN=190;BQB=0.374455;DP=2812;DP4=1527,1149,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42984e-05;MQSB=0.997305;RPB=0.921176;SGB=43.2083;VDB=0.694533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.8:13074400 chr08:013074400 0 W/13074400-13074400 FN3524-S SNP G -> A AC=1;AN=188;BQB=0.791135;DP=2718;DP4=1316,1303,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.00002e-07;MQSB=0.999794;RPB=0.280797;SGB=39.8925;VDB=0.219282;EFF=INTRON(MODIFIER||||295|LOC_Os08g21840|protein_coding|CODING|LOC_Os08g21840.1|1|1) FN2403.SNP.8:13083508 chr08:013083508 0 W/13083508-13083508 FN2403 SNP C -> G AC=1;AN=200;BQB=0.930292;DP=3893;DP4=2054,1521,9,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00308246;MQB=2.48646e-06;MQSB=6.25859e-10;RPB=0.543121;SGB=47.4799;VDB=0.66157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D1711H|1713|LOC_Os08g21860|protein_coding|CODING|LOC_Os08g21860.1|5|1) FN1540-S.SNP.8:13091286 chr08:013091286 0 W/13091286-13091286 FN1540-S Single Base Substitution T-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN391-S.SNP.8:13091428 chr08:013091428 0 W/13091428-13091428 FN391-S Single Base Substitution C-T INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2147-S.SNP.8:13092482 chr08:013092482 0 W/13092482-13092482 FN2147-S SNP G -> A AC=1;AN=168;BQB=7.25847e-05;DP=3815;DP4=2692,1081,25,4;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0133683;MQB=0.97589;MQSB=4.31298e-27;RPB=0.00023867;SGB=-311.457;VDB=0.0213155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.8:13095815 chr08:013095815 0 W/13095815-13095815 FN1217-S Single Base Substitution C-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2489.SNP.8:13100554 chr08:013100554 0 W/13100554-13100554 FN2489 SNP G -> T AC=1;AN=200;BQB=0.58433;DP=4801;DP4=2127,2304,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9487e-10;MQSB=0.848822;RPB=0.965445;SGB=47.4799;VDB=0.432556;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.8:13102076 chr08:013102076 0 W/13102076-13102076 FN3439-S SNP A -> T AC=1;AN=184;BQB=0.955746;DP=2633;DP4=1206,1369,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.92983e-06;MQSB=0.38571;RPB=0.577495;SGB=28.7043;VDB=0.539478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.8:13106947 chr08:013106947 0 W/13106947-13106947 FN1586-S Single Base Substitution A-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1540-S.SNP.8:13108028 chr08:013108028 0 W/13108028-13108028 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1540-S.SNP.8:13108029 chr08:013108029 0 W/13108029-13108029 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2158-S.SNP.8:13109532 chr08:013109532 0 W/13109532-13109532 FN2158-S SNP C -> G AC=1;AN=168;BQB=0.0125621;DP=3144;DP4=1758,1313,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08402e-06;MQSB=0.825857;RPB=0.611665;SGB=-61.7914;VDB=0.889657;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.8:13109746 chr08:013109746 0 W/13109746-13109746 FN2274-S SNP T -> C AC=1;AN=190;BQB=0.785832;DP=5085;DP4=2524,2229,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.85323e-19;MQSB=0.982098;RPB=0.821564;SGB=149.281;VDB=0.256097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.8:13117542 chr08:013117542 0 W/13117542-13117542 FN2095-S SNP C -> G AC=1;AN=168;BQB=0.953926;DP=1858;DP4=757,1060,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29562e-05;MQSB=0.951478;RPB=0.626101;SGB=38.8805;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.8:13122882 chr08:013122882 0 W/13122882-13122882 FN598-S Single Base Substitution A-T INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2386.SNP.8:13123773 chr08:013123773 0 W/13123773-13123773 FN2386 SNP G -> C AC=1;AN=192;BQB=0.960352;DP=5041;DP4=2532,2145,4,13;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=5.53495e-07;MQSB=5.21182e-17;RPB=0.999146;SGB=50.4731;VDB=0.485196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.8:13132772 chr08:013132772 0 W/13132772-13132772 FN-114 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g21920 retrotransposon protein, putative, unclassified, expressed SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2602-S.SNP.8:13136647 chr08:013136647 0 W/13136647-13136647 FN2602-S SNP C -> G AC=1;AN=198;BQB=0.8914;DP=4286;DP4=2084,1880,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.04993;MQB=0.537345;MQSB=0;RPB=0.19671;SGB=-14.4309;VDB=0.163924;EFF=INTRON(MODIFIER||||1560|LOC_Os08g21920|protein_coding|CODING|LOC_Os08g21920.1|10|1) FN3577-S.SNP.8:13143542 chr08:013143542 0 W/13143542-13143542 FN3577-S SNP A -> T AC=1;AN=188;BQB=0.89706;DP=2850;DP4=1425,1294,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.252281;MQB=0.98044;MQSB=7.18649e-23;RPB=0.360315;SGB=26.0762;VDB=0.840515;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.8:13146485 chr08:013146485 0 W/13146485-13146485 FN-356 Single Base Substitution C-T INTRON HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1115-S.SNP.8:13149054 chr08:013149054 0 W/13149054-13149054 FN1115-S Single Base Substitution C-T INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2293.SNP.8:13150296 chr08:013150296 0 W/13150296-13150296 FN2293 SNP C -> G AC=1;AN=192;BQB=0.278904;DP=4346;DP4=1875,2068,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=3.94862e-05;MQSB=4.41452e-20;RPB=0.85918;SGB=16.0922;VDB=0.235908;EFF=INTERGENIC(MODIFIER||||||||||1) FN-83.SNP.8:13155374 chr08:013155374 0 W/13155374-13155374 FN-83 Single Base Substitution G-A INTRON HOMO SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN2114-S.SNP.8:13155914 chr08:013155914 0 W/13155914-13155914 FN2114-S SNP T -> A AC=2;AN=166;BQB=0.969486;DP=1377;DP4=793,526,12,5;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=6.00336e-07;MQSB=0.89372;RPB=0.295661;SGB=27.0464;VDB=0.513204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.8:13159762 chr08:013159762 0 W/13159762-13159762 FN2713-S SNP C -> T AC=1;AN=200;BQB=0.526668;DP=5427;DP4=2497,2614,13,17;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00423807;MQB=0.0536727;MQSB=1.71408e-09;RPB=0.993697;SGB=63.3521;VDB=0.934165;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.8:13159928 chr08:013159928 0 W/13159928-13159928 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN411-S.SNP.8:13160922 chr08:013160922 0 W/13160922-13160922 FN411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3830-S.SNP.8:13162145 chr08:013162145 0 W/13162145-13162145 FN3830-S SNP A -> T AC=1;AN=190;BQB=0.997984;DP=3006;DP4=1488,1349,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0256154;MQB=0.374439;MQSB=0;RPB=0.454657;SGB=94.6341;VDB=0.384927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.8:13163526 chr08:013163526 0 W/13163526-13163526 FN1015-S Single Base Substitution T-A INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1015-S.SNP.8:13163527 chr08:013163527 0 W/13163527-13163527 FN1015-S Single Base Substitution C-T INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN701-S.SNP.8:13168110 chr08:013168110 0 W/13168110-13168110 FN701-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g21970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1317-S.SNP.8:13170937 chr08:013170937 0 W/13170937-13170937 FN1317-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g21970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2713-S.SNP.8:13175113 chr08:013175113 0 W/13175113-13175113 FN2713-S SNP T -> C AC=2;AN=200;BQB=0.841524;DP=4709;DP4=2292,2133,31,19;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0469314;MQB=0.000632791;MQSB=6.04349e-05;RPB=0.97974;SGB=6.25521;VDB=0.851849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.8:13175449 chr08:013175449 0 W/13175449-13175449 FN3578-S SNP C -> A AC=1;AN=188;BQB=0.987899;DP=3258;DP4=1539,1604,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=25;MQ0F=0.205648;MQB=0.866329;MQSB=6.01927e-07;RPB=0.404404;SGB=51.5091;VDB=0.195178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.8:13182289 chr08:013182289 0 W/13182289-13182289 FN2263-S SNP C -> T AC=2;AN=190;BQB=0.83271;DP=4526;DP4=2057,2118,24,18;HOB=0.020831;ICB=0.494793;MQ=22;MQ0F=0.306231;MQB=0.734458;MQSB=0;RPB=0.283729;SGB=185.712;VDB=0.0688439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G26E|1017|LOC_Os08g21990|protein_coding|CODING|LOC_Os08g21990.1|1|1) FN239-S.SNP.8:13202035 chr08:013202035 0 W/13202035-13202035 FN239-S Single Base Substitution T-A INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3731-S.SNP.8:13203019 chr08:013203019 0 W/13203019-13203019 FN3731-S SNP A -> G AC=1;AN=190;BQB=0.976449;DP=2629;DP4=1315,1217,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0536326;MQB=0.0914322;MQSB=0.207998;RPB=0.901246;SGB=62.7569;VDB=0.257186;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C670R|697|LOC_Os08g22006|protein_coding|CODING|LOC_Os08g22006.1|5|1) FN450-S.SNP.8:13204633 chr08:013204633 0 W/13204633-13204633 FN450-S Single Base Substitution G-T INTRON HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN3730-S.SNP.8:13207435 chr08:013207435 0 W/13207435-13207435 FN3730-S SNP C -> A AC=2;AN=190;BQB=0.939124;DP=2990;DP4=1465,1408,18,18;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0705686;MQB=0.00345787;MQSB=6.03671e-06;RPB=0.833553;SGB=158.388;VDB=0.426766;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ttt|V92F|697|LOC_Os08g22006|protein_coding|CODING|LOC_Os08g22006.1|1|1) FN1085-S.SNP.8:13219128 chr08:013219128 0 W/13219128-13219128 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2195-S.SNP.8:13232481 chr08:013232481 0 W/13232481-13232481 FN2195-S SNP T -> A AC=1;AN=190;BQB=0.940534;DP=4292;DP4=2071,1924,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0244641;MQB=0.0627268;MQSB=4.91871e-28;RPB=0.649634;SGB=8.33661;VDB=0.866335;EFF=INTRON(MODIFIER||||180|LOC_Os08g22014|protein_coding|CODING|LOC_Os08g22014.1|2|1) FN2401.SNP.8:13237687 chr08:013237687 0 W/13237687-13237687 FN2401 SNP C -> A AC=2;AN=200;BQB=0.0837023;DP=5097;DP4=2231,2514,21,25;HOB=0.0198;ICB=0.495051;MQ=22;MQ0F=0.220718;MQB=0.0406258;MQSB=0;RPB=0.000803416;SGB=155.635;VDB=0.00519894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.8:13240939 chr08:013240939 0 W/13240939-13240939 FN3475-S SNP T -> C AC=1;AN=184;BQB=0.833271;DP=2785;DP4=1515,1190,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.00143627;MQB=0.983724;MQSB=0.000881684;RPB=0.202251;SGB=42.7914;VDB=0.257957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3758-S.SNP.8:13244766 chr08:013244766 0 W/13244766-13244766 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.967241;DP=2925;DP4=1391,1458,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0451282;MQB=0.417434;MQSB=0.0621191;RPB=0.79372;SGB=49.0954;VDB=0.847412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.8:13253115 chr08:013253115 0 W/13253115-13253115 FN1268-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2210-S.SNP.8:13257597 chr08:013257597 0 W/13257597-13257597 FN2210-S SNP A -> G AC=1;AN=190;BQB=0.448515;DP=5059;DP4=2387,2233,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0156157;MQB=0.00141606;MQSB=0.39083;RPB=0.294317;SGB=67.3108;VDB=0.34175;EFF=SPLICE_SITE_REGION(LOW||||900|LOC_Os08g22026|protein_coding|CODING|LOC_Os08g22026.1|4|1),INTRON(MODIFIER||||900|LOC_Os08g22026|protein_coding|CODING|LOC_Os08g22026.1|4|1) FN3506-S.SNP.8:13258113 chr08:013258113 0 W/13258113-13258113 FN3506-S SNP G -> A AC=1;AN=188;BQB=0.980452;DP=2613;DP4=1173,1385,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0646766;MQB=0.246827;MQSB=7.64491e-15;RPB=0.501083;SGB=39.8925;VDB=0.422799;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G508D|900|LOC_Os08g22026|protein_coding|CODING|LOC_Os08g22026.1|5|1) FN849-S.SNP.8:13262546 chr08:013262546 0 W/13262546-13262546 FN849-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g22028 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2420.SNP.8:13273185 chr08:013273185 0 W/13273185-13273185 FN2420 SNP A -> G AC=1;AN=200;BQB=0.422846;DP=4857;DP4=2276,2275,19,12;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.360716;MQB=0.6474;MQSB=2.14769e-07;RPB=0.963936;SGB=101.557;VDB=0.404787;EFF=INTRON(MODIFIER||||881|LOC_Os08g22036|protein_coding|CODING|LOC_Os08g22036.1|3|1) FN2665-S.SNP.8:13276658 chr08:013276658 0 W/13276658-13276658 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.833482;DP=4623;DP4=2821,1572,19,9;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.419425;MQB=0.621755;MQSB=7.34697e-06;RPB=0.381072;SGB=58.1418;VDB=0.0979665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.8:13286583 chr08:013286583 0 W/13286583-13286583 FN2233-S SNP C -> G AC=2;AN=190;BQB=0.24433;DP=4041;DP4=1744,2000,15,12;HOB=0.020831;ICB=0.494793;MQ=24;MQ0F=0.174462;MQB=0.932589;MQSB=0;RPB=0.884251;SGB=85.8548;VDB=0.0594307;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.8:13290846 chr08:013290846 0 W/13290846-13290846 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2358.SNP.8:13291019 chr08:013291019 0 W/13291019-13291019 FN2358 SNP G -> A AC=1;AN=192;BQB=0.691389;DP=4380;DP4=1896,2239,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=23;MQ0F=0.299543;MQB=0.611283;MQSB=0;RPB=0.599748;SGB=26.3496;VDB=0.260767;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.8:13298314 chr08:013298314 0 W/13298314-13298314 FN_809-6-1 Single Base Substitution C-G HET LOC_Os08g22020 retrotransposon, putative, centromere-specific, expressed SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN4105-S.SNP.8:13302258 chr08:013302258 0 W/13302258-13302258 FN4105-S SNP G -> A AC=1;AN=182;BQB=0.79092;DP=3111;DP4=1458,1600,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.00032144;MQB=0.016989;MQSB=0.308116;RPB=0.990789;SGB=18.1224;VDB=0.529202;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A73T|1303|LOC_Os08g22030|protein_coding|CODING|LOC_Os08g22030.1|1|1) FN2181-S.SNP.8:13306338 chr08:013306338 0 W/13306338-13306338 FN2181-S SNP G -> T AC=1;AN=190;BQB=0.142804;DP=4598;DP4=2090,2136,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.0441496;MQB=0.654115;MQSB=0;RPB=0.174883;SGB=68.0854;VDB=0.892844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1094L|1303|LOC_Os08g22030|protein_coding|CODING|LOC_Os08g22030.1|7|1) FN3507-S.SNP.8:13306776 chr08:013306776 0 W/13306776-13306776 FN3507-S SNP G -> A AC=1;AN=188;BQB=0.744802;DP=3257;DP4=1799,1360,13,17;HOB=5.65867e-05;ICB=0.000113775;MQ=11;MQ0F=0.541296;MQB=0.021361;MQSB=1.02028e-10;RPB=0.532665;SGB=130.758;VDB=0.223657;EFF=INTRON(MODIFIER||||1303|LOC_Os08g22030|protein_coding|CODING|LOC_Os08g22030.1|8|1) FN-288.SNP.8:13312423 chr08:013312423 0 W/13312423-13312423 FN-288 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN4255-S.SNP.8:13318996 chr08:013318996 0 W/13318996-13318996 FN4255-S SNP A -> T AC=1;AN=170;BQB=0.99535;DP=2475;DP4=1132,1090,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=26;MQ0F=0.189495;MQB=0.780814;MQSB=8.25141e-22;RPB=0.854607;SGB=17.4413;VDB=0.371239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.8:13320931 chr08:013320931 0 W/13320931-13320931 FN3958-S SNP G -> A AC=1;AN=168;BQB=0.943532;DP=2650;DP4=1240,1294,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.000377358;MQB=0.00309411;MQSB=7.33057e-05;RPB=0.892585;SGB=58.7637;VDB=0.824688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.8:13325049 chr08:013325049 0 W/13325049-13325049 FN1153-S Single Base Substitution G-A INTERGENIC HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN1317-S.SNP.8:13334155 chr08:013334155 0 W/13334155-13334155 FN1317-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2751-S.SNP.8:13335815 chr08:013335815 0 W/13335815-13335815 FN2751-S SNP C -> A AC=1;AN=200;BQB=0.343185;DP=4528;DP4=2201,2055,5,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00154594;MQB=9.9555e-05;MQSB=2.00833e-08;RPB=0.996871;SGB=25.849;VDB=0.534485;EFF=INTRON(MODIFIER||||731|LOC_Os08g22080|protein_coding|CODING|LOC_Os08g22080.1|1|1) FN2361.SNP.8:13339618 chr08:013339618 0 W/13339618-13339618 FN2361 SNP G -> A AC=1;AN=192;BQB=0.987375;DP=4792;DP4=2180,2306,21,16;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.00250417;MQB=0.00474964;MQSB=0.000184417;RPB=0.698442;SGB=121.76;VDB=0.859754;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.8:13339635 chr08:013339635 0 W/13339635-13339635 W416-6-1 Single Base Substitution C-T INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN4176-S.SNP.8:13343504 chr08:013343504 0 W/13343504-13343504 FN4176-S SNP G -> T AC=1;AN=170;BQB=0.814279;DP=2576;DP4=1325,1174,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.218944;MQB=0.425422;MQSB=8.71692e-08;RPB=0.706919;SGB=65.6427;VDB=0.469308;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L335|859|LOC_Os08g22110|protein_coding|CODING|LOC_Os08g22110.1|4|1) FN-238.SNP.8:13344735 chr08:013344735 0 W/13344735-13344735 FN-238 Single Base Substitution A-T INTRON HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1693-S.SNP.8:13369756 chr08:013369756 0 W/13369756-13369756 FN1693-S SNP T -> C AC=2;AN=188;BQB=0.0754781;DP=4157;DP4=2011,2093,18,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.2313e-15;MQSB=0.999526;RPB=0.108782;SGB=22.5144;VDB=0.334932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.8:13375747 chr08:013375747 0 W/13375747-13375747 FN3502-S SNP A -> G AC=1;AN=188;BQB=0.60678;DP=2861;DP4=1443,1357,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39499e-07;MQSB=0.827603;RPB=0.630687;SGB=25.3545;VDB=0.470678;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.8:13375752 chr08:013375752 0 W/13375752-13375752 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.29107;DP=2873;DP4=1443,1360,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.8506e-07;MQSB=0.811202;RPB=0.210362;SGB=25.3545;VDB=0.177201;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.8:13381137 chr08:013381137 0 W/13381137-13381137 FN2532-S SNP G -> A AC=1;AN=186;BQB=0.864113;DP=3924;DP4=1937,1796,11,8;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.94268e-11;MQSB=0.869302;RPB=0.654952;SGB=34.5346;VDB=0.487507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D700N|1351|LOC_Os08g22180|protein_coding|CODING|LOC_Os08g22180.1|5|1) FN2500.SNP.8:13381230 chr08:013381230 0 W/13381230-13381230 FN2500 SNP G -> A AC=1;AN=200;BQB=0.75284;DP=4345;DP4=2079,2068,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.55857e-14;MQSB=0.787992;RPB=0.861669;SGB=109.527;VDB=0.64959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A731T|1351|LOC_Os08g22180|protein_coding|CODING|LOC_Os08g22180.1|5|1) FN550-S.SNP.8:13382827 chr08:013382827 0 W/13382827-13382827 FN550-S Single Base Substitution G-A INTRON HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1758-S.SNP.8:13383178 chr08:013383178 0 W/13383178-13383178 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.786905;DP=1247;DP4=196,1017,1,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00160385;MQB=0.316455;MQSB=0.146555;RPB=0.216923;SGB=26.2637;VDB=0.0827521;EFF=INTRON(MODIFIER||||1351|LOC_Os08g22180|protein_coding|CODING|LOC_Os08g22180.1|7|1) FN1713-S.SNP.8:13392751 chr08:013392751 0 W/13392751-13392751 FN1713-S SNP A -> G AC=1;AN=188;BQB=0.00261752;DP=3209;DP4=1753,1425,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.88155e-05;MQSB=0.93809;RPB=0.99025;SGB=-79.0704;VDB=0.552276;EFF=UTR_3_PRIME(MODIFIER||80||294|LOC_Os08g22200|protein_coding|CODING|LOC_Os08g22200.1|6|1) FN454-S.SNP.8:13411875 chr08:013411875 0 W/13411875-13411875 FN454-S Single Base Substitution A-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN1277-S.SNP.8:13416753 chr08:013416753 0 W/13416753-13416753 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2380.SNP.8:13419707 chr08:013419707 0 W/13419707-13419707 FN2380 SNP G -> T AC=1;AN=192;BQB=0.463553;DP=4701;DP4=2086,2338,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.25092e-09;MQSB=0.800949;RPB=0.498011;SGB=-60.1939;VDB=0.0247915;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C515F|588|LOC_Os08g22260|protein_coding|CODING|LOC_Os08g22260.1|4|1) FN3762-S.SNP.8:13422733 chr08:013422733 0 W/13422733-13422733 FN3762-S SNP A -> G AC=1;AN=190;BQB=0.979897;DP=3335;DP4=1184,2010,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0524738;MQB=0.874152;MQSB=0.000103126;RPB=0.355347;SGB=80.9724;VDB=0.884425;EFF=INTRON(MODIFIER||||836|LOC_Os08g22270|protein_coding|CODING|LOC_Os08g22270.1|5|1) FN2784-S.SNP.8:13438555 chr08:013438555 0 W/13438555-13438555 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.91182;DP=3785;DP4=1826,1770,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.87855e-13;MQSB=0.465925;RPB=0.970679;SGB=26.8957;VDB=0.505909;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.8:13442788 chr08:013442788 0 W/13442788-13442788 FN494-S Single Base Substitution G-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN3956-S.SNP.8:13443959 chr08:013443959 0 W/13443959-13443959 FN3956-S SNP C -> T AC=1;AN=168;BQB=0.833558;DP=2602;DP4=1360,1115,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.88763e-09;MQSB=0.911618;RPB=0.602639;SGB=27.0464;VDB=0.951767;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.8:13443961 chr08:013443961 0 W/13443961-13443961 FN3956-S SNP C -> A AC=1;AN=168;BQB=0.317439;DP=2600;DP4=1381,1119,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.1704e-08;MQSB=0.904199;RPB=0.595235;SGB=45.0404;VDB=0.712842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.8:13444213 chr08:013444213 0 W/13444213-13444213 FN2468 SNP T -> A AC=1;AN=200;BQB=0.203214;DP=4742;DP4=2157,2320,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06509e-08;MQSB=0.978782;RPB=0.675752;SGB=49.6594;VDB=0.158054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.8:13444228 chr08:013444228 0 W/13444228-13444228 FN2730-S SNP G -> A AC=2;AN=200;BQB=0.627714;DP=5203;DP4=2338,2573,13,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.61477e-22;MQSB=0.91827;RPB=0.975559;SGB=112.373;VDB=0.991244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.8:13445007 chr08:013445007 0 W/13445007-13445007 FN1753-S SNP C -> T AC=2;AN=188;BQB=0.713974;DP=3568;DP4=1657,1817,24,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.47611e-24;MQSB=0.941838;RPB=0.310848;SGB=53.3803;VDB=0.168055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.8:13446130 chr08:013446130 0 W/13446130-13446130 FN2375 SNP G -> A AC=1;AN=192;BQB=0.0495889;DP=5007;DP4=2050,2720,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.17098e-07;MQSB=0.898562;RPB=0.389908;SGB=31.4783;VDB=0.305641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.8:13449067 chr08:013449067 0 W/13449067-13449067 FN3449-S SNP G -> T AC=1;AN=184;BQB=0.674308;DP=3610;DP4=1779,1747,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.98577e-10;MQSB=0.958701;RPB=0.384588;SGB=56.8786;VDB=0.311825;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L687F|1439|LOC_Os08g22310|protein_coding|CODING|LOC_Os08g22310.1|5|1) FN1118-S.SNP.8:13454298 chr08:013454298 0 W/13454298-13454298 FN1118-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g22320 retrotransposon protein, putative, unclassified, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN-269.SNP.8:13468488 chr08:013468488 0 W/13468488-13468488 FN-269 Single Base Substitution C-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2124-S.SNP.8:13468899 chr08:013468899 0 W/13468899-13468899 FN2124-S SNP A -> T AC=2;AN=168;BQB=0.850344;DP=3722;DP4=1697,1949,28,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.11235e-27;MQSB=0.939952;RPB=0.169716;SGB=-122.99;VDB=0.0235055;EFF=INTERGENIC(MODIFIER||||||||||1) FN871-S.SNP.8:13478506 chr08:013478506 0 W/13478506-13478506 FN871-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g22354 polyadenylate-binding protein, putative, expressed SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN666-S.SNP.8:13480939 chr08:013480939 0 W/13480939-13480939 FN666-S Single Base Substitution A-G INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN666-S.SNP.8:13480943 chr08:013480943 0 W/13480943-13480943 FN666-S Single Base Substitution A-G INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3578-S.SNP.8:13483619 chr08:013483619 0 W/13483619-13483619 FN3578-S SNP A -> G AC=1;AN=188;BQB=0.588703;DP=2564;DP4=1247,1217,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.07817e-08;MQSB=0.99938;RPB=0.0792852;SGB=39.5276;VDB=0.0303478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.8:13484119 chr08:013484119 0 W/13484119-13484119 FN1056-S Single Base Substitution G-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN2791-S.SNP.8:13495721 chr08:013495721 0 W/13495721-13495721 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.521545;DP=3869;DP4=1849,1822,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.69082e-13;MQSB=0.923936;RPB=0.437176;SGB=86.3098;VDB=0.964911;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E260K|964|LOC_Os08g22380|protein_coding|CODING|LOC_Os08g22380.1|2|1) FN3795-S.SNP.8:13500655 chr08:013500655 0 W/13500655-13500655 FN3795-S SNP T -> C AC=2;AN=190;BQB=0.952507;DP=2442;DP4=1196,1129,12,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.002457;MQB=4.39533e-07;MQSB=0.812347;RPB=0.983743;SGB=90.0802;VDB=0.96467;EFF=INTERGENIC(MODIFIER||||||||||1) FN407-S.SNP.8:13502960 chr08:013502960 0 W/13502960-13502960 FN407-S Single Base Substitution A-G INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1693-S.SNP.8:13504233 chr08:013504233 0 W/13504233-13504233 FN1693-S SNP T -> G AC=1;AN=188;BQB=0.488928;DP=2543;DP4=1119,1338,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000393236;MQB=8.00566e-05;MQSB=6.03076e-14;RPB=0.910277;SGB=-13.3699;VDB=0.337238;EFF=INTERGENIC(MODIFIER||||||||||1) FN1693-S.SNP.8:13504242 chr08:013504242 0 W/13504242-13504242 FN1693-S SNP G -> T AC=2;AN=188;BQB=0.0220271;DP=2533;DP4=1135,1307,11,10;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.000394789;MQB=9.17119e-05;MQSB=1.25962e-14;RPB=0.969475;SGB=-12.2833;VDB=0.524149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.8:13507007 chr08:013507007 0 W/13507007-13507007 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.856331;DP=3153;DP4=1569,1508,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.98545e-09;MQSB=0.851068;RPB=0.445353;SGB=43.0708;VDB=0.865087;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.8:13507008 chr08:013507008 0 W/13507008-13507008 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.998738;DP=3162;DP4=1485,1461,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.40514e-09;MQSB=0.892607;RPB=0.789452;SGB=23.5329;VDB=0.824201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-44.SNP.8:13509105 chr08:013509105 0 W/13509105-13509105 FN-44 Single Base Substitution A-G INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN2532-S.SNP.8:13509310 chr08:013509310 0 W/13509310-13509310 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.99956;DP=3928;DP4=1964,1822,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.04709e-05;MQSB=0.137235;RPB=0.231047;SGB=32.9588;VDB=0.504569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.8:13515049 chr08:013515049 0 W/13515049-13515049 FN2494 SNP G -> C AC=2;AN=200;BQB=0.939287;DP=4658;DP4=2079,2258,16,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.03575e-16;MQSB=0.71186;RPB=0.98261;SGB=114.132;VDB=0.170967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.8:13519029 chr08:013519029 0 W/13519029-13519029 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.835152;DP=2630;DP4=1288,1277,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.4311e-08;MQSB=0.147514;RPB=0.0294452;SGB=48.7425;VDB=0.505913;EFF=INTRON(MODIFIER||||237|LOC_Os08g22400|protein_coding|CODING|LOC_Os08g22400.1|1|1) FN3733-S.SNP.8:13519691 chr08:013519691 0 W/13519691-13519691 FN3733-S SNP A -> G AC=1;AN=190;BQB=0.680271;DP=2666;DP4=1332,1214,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000750188;MQB=2.79985e-07;MQSB=0.969953;RPB=0.920272;SGB=43.2083;VDB=0.459099;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S117|237|LOC_Os08g22400|protein_coding|CODING|LOC_Os08g22400.1|3|1) FN700-S.SNP.8:13522177 chr08:013522177 0 W/13522177-13522177 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1650-S.SNP.8:13524985 chr08:013524985 0 W/13524985-13524985 FN1650-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3713-S.SNP.8:13526564 chr08:013526564 0 W/13526564-13526564 FN3713-S SNP C -> T AC=2;AN=190;BQB=0.976477;DP=2618;DP4=1176,1286,15,16;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.148587;MQB=0.995459;MQSB=2.4928e-21;RPB=0.862236;SGB=135.619;VDB=0.249644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1514I|1619|LOC_Os08g22420|protein_coding|CODING|LOC_Os08g22420.1|2|1) FN2375.SNP.8:13526704 chr08:013526704 0 W/13526704-13526704 FN2375 SNP C -> A AC=1;AN=192;BQB=0.92008;DP=5169;DP4=2589,2296,13,4;HOB=5.42535e-05;ICB=0.000109072;MQ=19;MQ0F=0.247243;MQB=0.106836;MQSB=2.04572e-35;RPB=0.569354;SGB=72.0322;VDB=0.261407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R1467L|1619|LOC_Os08g22420|protein_coding|CODING|LOC_Os08g22420.1|2|1) FN-111.SNP.8:13536095 chr08:013536095 0 W/13536095-13536095 FN-111 Single Base Substitution A-G INTRON HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN2332.SNP.8:13541546 chr08:013541546 0 W/13541546-13541546 FN2332 SNP C -> T AC=1;AN=192;BQB=0.730663;DP=4776;DP4=2223,2233,16,23;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.07445e-12;MQSB=0.449851;RPB=0.760496;SGB=128.889;VDB=0.134034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.8:13547081 chr08:013547081 0 W/13547081-13547081 FN3389-S SNP T -> C AC=1;AN=184;BQB=0.817985;DP=2727;DP4=1313,1330,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.09975e-08;MQSB=0.991789;RPB=0.619118;SGB=48.7425;VDB=0.844212;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.8:13547410 chr08:013547410 0 W/13547410-13547410 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.709155;DP=3054;DP4=1487,1489,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00753111;MQB=2.07249e-05;MQSB=3.41912e-11;RPB=0.0235889;SGB=87.856;VDB=0.511881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.8:13548733 chr08:013548733 0 W/13548733-13548733 FN2351 SNP A -> T AC=1;AN=192;BQB=0.544903;DP=4820;DP4=2318,2117,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.07536e-10;MQSB=0.934844;RPB=0.980624;SGB=67.4678;VDB=0.60885;EFF=INTRON(MODIFIER||||777|LOC_Os08g22480|protein_coding|CODING|LOC_Os08g22480.1|2|1) FN-234.SNP.8:13553796 chr08:013553796 0 W/13553796-13553796 FN-234 Single Base Substitution C-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. W443-5-1-3.SNP.8:13558746 chr08:013558746 0 W/13558746-13558746 W443-5-1-3 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g22510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. W443-5-1-3.SNP.8:13558747 chr08:013558747 0 W/13558747-13558747 W443-5-1-3 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g22510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN527-S.SNP.8:13563587 chr08:013563587 0 W/13563587-13563587 FN527-S Single Base Substitution C-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2545-S.SNP.8:13565191 chr08:013565191 0 W/13565191-13565191 FN2545-S SNP T -> C AC=1;AN=198;BQB=0.999362;DP=4223;DP4=2035,1943,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00284158;MQB=2.5479e-09;MQSB=0.91924;RPB=0.909931;SGB=6.15916;VDB=0.884131;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.8:13571167 chr08:013571167 0 W/13571167-13571167 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.990658;DP=1914;DP4=1127,628,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.07862e-06;MQSB=0.672775;RPB=0.738647;SGB=44.1818;VDB=0.731075;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.8:13573305 chr08:013573305 0 W/13573305-13573305 FN1455-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g22540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1638-S.SNP.8:13573487 chr08:013573487 0 W/13573487-13573487 FN1638-S Single Base Substitution C-T INTRON HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3727-S.SNP.8:13574127 chr08:013574127 0 W/13574127-13574127 FN3727-S SNP G -> A AC=2;AN=190;BQB=0.791016;DP=3186;DP4=1584,1506,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.80114e-08;MQSB=0.866534;RPB=0.613019;SGB=80.9724;VDB=0.924144;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I414|1162|LOC_Os08g22540|protein_coding|CODING|LOC_Os08g22540.1|4|1) FN3842-S.SNP.8:13574926 chr08:013574926 0 W/13574926-13574926 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.827844;DP=3173;DP4=1529,1526,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80265e-07;MQSB=0.995234;RPB=0.779139;SGB=-2.10437;VDB=0.458056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G196R|1162|LOC_Os08g22540|protein_coding|CODING|LOC_Os08g22540.1|3|1),SPLICE_SITE_REGION(LOW||||1162|LOC_Os08g22540|protein_coding|CODING|LOC_Os08g22540.1|3|1) FN3324-S.SNP.8:13588661 chr08:013588661 0 W/13588661-13588661 FN3324-S SNP G -> A AC=2;AN=184;BQB=0.557717;DP=3281;DP4=1666,1495,12,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.25669e-09;MQSB=0.966981;RPB=0.871971;SGB=93.9603;VDB=0.239561;EFF=INTRON(MODIFIER||||253|LOC_Os08g22570|protein_coding|CODING|LOC_Os08g22570.1|1|1) FN3802-S.SNP.8:13588841 chr08:013588841 0 W/13588841-13588841 FN3802-S SNP C -> T AC=1;AN=190;BQB=0.853085;DP=2815;DP4=1622,1118,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23983e-10;MQSB=0.736429;RPB=0.97763;SGB=71.8647;VDB=0.662876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V40I|253|LOC_Os08g22570|protein_coding|CODING|LOC_Os08g22570.1|1|1) FN-168.SNP.8:13589320 chr08:013589320 0 W/13589320-13589320 FN-168 Single Base Substitution A-G INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2257-S.SNP.8:13591548 chr08:013591548 0 W/13591548-13591548 FN2257-S SNP C -> T AC=2;AN=190;BQB=0.722452;DP=3936;DP4=1483,1862,21,28;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.91154e-17;MQSB=0.466849;RPB=0.992679;SGB=110.492;VDB=0.00078267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.8:13591919 chr08:013591919 0 W/13591919-13591919 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.859406;DP=4743;DP4=2458,2066,16,19;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0364748;MQB=1.34244e-07;MQSB=1.04723e-22;RPB=0.996176;SGB=115.978;VDB=0.747898;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.8:13594575 chr08:013594575 0 W/13594575-13594575 FN3749-S SNP T -> A AC=1;AN=190;BQB=0.970047;DP=3274;DP4=1542,1478,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0308491;MQB=0.233971;MQSB=0.136639;RPB=0.431468;SGB=53.6492;VDB=0.0358497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.8:13594604 chr08:013594604 0 W/13594604-13594604 FN1243-S Single Base Substitution T-C INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-290.SNP.8:13595264 chr08:013595264 0 W/13595264-13595264 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN4010-S.SNP.8:13595530 chr08:013595530 0 W/13595530-13595530 FN4010-S SNP G -> T AC=1;AN=168;BQB=0.46867;DP=3296;DP4=1578,1591,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0303398;MQB=0.0833314;MQSB=4.62756e-28;RPB=0.694834;SGB=22.1847;VDB=0.774083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.8:13608316 chr08:013608316 0 W/13608316-13608316 FN3366-S SNP G -> T AC=1;AN=184;BQB=0.895752;DP=3665;DP4=1595,1971,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.04798e-08;MQSB=0.614804;RPB=0.215058;SGB=62.3078;VDB=0.331025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G100C|1311|LOC_Os08g22620|protein_coding|CODING|LOC_Os08g22620.1|1|1) FN2279-S.SNP.8:13609442 chr08:013609442 0 W/13609442-13609442 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.792454;DP=3960;DP4=1817,1793,18,15;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0020202;MQB=1.12657e-11;MQSB=5.06195e-05;RPB=0.791285;SGB=69.6295;VDB=0.716975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A475V|1311|LOC_Os08g22620|protein_coding|CODING|LOC_Os08g22620.1|1|1) FN1243-S.SNP.8:13611706 chr08:013611706 0 W/13611706-13611706 FN1243-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g22620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1512-S.SNP.8:13612653 chr08:013612653 0 W/13612653-13612653 FN1512-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN-203.SNP.8:13613717 chr08:013613717 0 W/13613717-13613717 FN-203 Single Base Substitution A-G INTRON HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN1731-S.SNP.8:13614828 chr08:013614828 0 W/13614828-13614828 FN1731-S SNP G -> T AC=1;AN=188;BQB=0.0378633;DP=2210;DP4=1018,1150,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000652251;MQSB=0.975139;RPB=0.971746;SGB=-104.065;VDB=0.717776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A282D|684|LOC_Os08g22630|protein_coding|CODING|LOC_Os08g22630.1|2|1) FN-257.SNP.8:13627985 chr08:013627985 0 W/13627985-13627985 FN-257 Single Base Substitution T-C INTRON HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2536-S.SNP.8:13628218 chr08:013628218 0 W/13628218-13628218 FN2536-S SNP T -> A AC=1;AN=198;BQB=0.892477;DP=4314;DP4=2100,2048,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.46924e-05;MQSB=0.956675;RPB=0.934103;SGB=35.7638;VDB=0.260793;EFF=INTRON(MODIFIER||||641|LOC_Os08g22650|protein_coding|CODING|LOC_Os08g22650.1|6|1) FN950-S.SNP.8:13628815 chr08:013628815 0 W/13628815-13628815 FN950-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g22650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN_814-7-1.SNP.8:13630189 chr08:013630189 0 W/13630189-13630189 FN_814-7-1 Single Base Substitution C-T Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN713-S.SNP.8:13633940 chr08:013633940 0 W/13633940-13633940 FN713-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g22660 retrotransposon, putative, centromere-specific, expressed SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1392-S.SNP.8:13636524 chr08:013636524 0 W/13636524-13636524 FN1392-S Single Base Substitution T-C INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2530-S.SNP.8:13646410 chr08:013646410 0 W/13646410-13646410 FN2530-S SNP T -> A AC=1;AN=198;BQB=0.966746;DP=5564;DP4=1860,3471,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.153666;MQB=0.0324899;MQSB=0;RPB=0.171785;SGB=67.9293;VDB=0.233598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.8:13654777 chr08:013654777 0 W/13654777-13654777 FN1614-S Single Base Substitution T-G INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2753-S.SNP.8:13660220 chr08:013660220 0 W/13660220-13660220 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.430215;DP=4603;DP4=1987,2390,13,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00760374;MQB=4.86907e-08;MQSB=0.00516667;RPB=0.591388;SGB=17.5158;VDB=0.208372;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.8:13663069 chr08:013663069 0 W/13663069-13663069 FN_N1-220-1 Single Base Substitution T-A HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN3749-S.SNP.8:13663183 chr08:013663183 0 W/13663183-13663183 FN3749-S SNP G -> A AC=1;AN=190;BQB=0.669896;DP=3461;DP4=1543,1789,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00462294;MQB=0.000590138;MQSB=6.42635e-42;RPB=0.722312;SGB=82.301;VDB=0.397246;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.8:13663237 chr08:013663237 0 W/13663237-13663237 FN-90 Single Base Substitution G-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1458-S.SNP.8:13668400 chr08:013668400 0 W/13668400-13668400 FN1458-S Single Base Substitution G-C INTRON HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-273.SNP.8:13668908 chr08:013668908 0 W/13668908-13668908 FN-273 Single Base Substitution A-G INTRON HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN4311-S.SNP.8:13670511 chr08:013670511 0 W/13670511-13670511 FN4311-S SNP T -> G AC=2;AN=170;BQB=0.774939;DP=2338;DP4=1099,854,10,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.07464e-13;MQSB=0.785722;RPB=0.0345493;SGB=-72.5513;VDB=0.312978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.8:13678345 chr08:013678345 0 W/13678345-13678345 FN3965-S SNP G -> T AC=1;AN=168;BQB=0.815746;DP=2700;DP4=1300,1299,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=1.34652e-09;MQSB=0.999035;RPB=0.176545;SGB=44.0621;VDB=0.654636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R328M|660|LOC_Os08g22750|protein_coding|CODING|LOC_Os08g22750.1|4|1) FN3421-S.SNP.8:13685898 chr08:013685898 0 W/13685898-13685898 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.958056;DP=3008;DP4=1403,1547,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.67592e-06;MQSB=0.995416;RPB=0.838902;SGB=44.2207;VDB=0.496362;EFF=INTRON(MODIFIER||||1701|LOC_Os08g22760|protein_coding|CODING|LOC_Os08g22760.1|4|1) FN3820-S.SNP.8:13686734 chr08:013686734 0 W/13686734-13686734 FN3820-S SNP T -> A AC=1;AN=190;BQB=0.77542;DP=3076;DP4=1544,1421,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000479525;MQSB=0.955815;RPB=0.701353;SGB=21.8853;VDB=0.746772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T64S|1701|LOC_Os08g22760|protein_coding|CODING|LOC_Os08g22760.1|2|1) FN4093-S.SNP.8:13688464 chr08:013688464 0 W/13688464-13688464 FN4093-S SNP C -> T AC=1;AN=182;BQB=0.485855;DP=2869;DP4=1344,1449,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.54123e-06;MQSB=0.954318;RPB=0.579454;SGB=57.644;VDB=0.440099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.8:13697075 chr08:013697075 0 W/13697075-13697075 FN2667-S SNP T -> A AC=1;AN=200;BQB=0.528845;DP=5593;DP4=2790,2596,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.20569e-13;MQSB=0.36106;RPB=0.995498;SGB=87.1368;VDB=0.786255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.8:13697729 chr08:013697729 0 W/13697729-13697729 FN-53 Single Base Substitution C-G INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN3407-S.SNP.8:13698319 chr08:013698319 0 W/13698319-13698319 FN3407-S SNP T -> G AC=1;AN=184;BQB=0.409466;DP=2880;DP4=1506,1292,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000146123;MQSB=0.999155;RPB=0.997822;SGB=25.1826;VDB=0.474122;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.8:13704155 chr08:013704155 0 W/13704155-13704155 FN3578-S SNP G -> A AC=1;AN=188;BQB=0.0330878;DP=4061;DP4=2028,1876,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.23584e-07;MQSB=0.989411;RPB=0.785727;SGB=103.498;VDB=0.526122;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||921|LOC_Os08g22790|protein_coding|CODING|LOC_Os08g22790.1|4|1),INTRON(MODIFIER||||921|LOC_Os08g22790|protein_coding|CODING|LOC_Os08g22790.1|3|1);LOF=(LOC_Os08g22790|LOC_Os08g22790|1|1.00) FN-126.SNP.8:13714586 chr08:013714586 0 W/13714586-13714586 FN-126 Single Base Substitution C-G INTERGENIC HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2199-S.SNP.8:13715487 chr08:013715487 0 W/13715487-13715487 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.958706;DP=4606;DP4=2287,2066,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000217108;MQB=3.98534e-08;MQSB=0.990777;RPB=0.534616;SGB=43.2083;VDB=0.949587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.8:13719807 chr08:013719807 0 W/13719807-13719807 FN2620-S SNP T -> G AC=1;AN=198;BQB=0.466302;DP=4652;DP4=2582,1893,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0449269;MQB=0.857884;MQSB=0;RPB=0.445828;SGB=67.9293;VDB=0.442372;EFF=INTRON(MODIFIER||||1576|LOC_Os08g22820|protein_coding|CODING|LOC_Os08g22820.1|1|1) FN3843-S.SNP.8:13723492 chr08:013723492 0 W/13723492-13723492 FN3843-S SNP G -> A AC=1;AN=190;BQB=0.965293;DP=3151;DP4=1659,1361,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0625198;MQB=0.940678;MQSB=3.03437e-32;RPB=0.469007;SGB=94.6341;VDB=0.911233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R932H|1576|LOC_Os08g22820|protein_coding|CODING|LOC_Os08g22820.1|5|1) FN1533-S.SNP.8:13723591 chr08:013723591 0 W/13723591-13723591 FN1533-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g22820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1212-S.SNP.8:13740200 chr08:013740200 0 W/13740200-13740200 FN1212-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN-132.SNP.8:13740633 chr08:013740633 0 W/13740633-13740633 FN-132 Single Base Substitution T-G UTR_3_PRIME HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2587-S.SNP.8:13741481 chr08:013741481 0 W/13741481-13741481 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.911764;DP=4062;DP4=1989,1880,25,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.10069e-25;MQSB=0.940437;RPB=0.810991;SGB=107.198;VDB=0.816795;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|22|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|21|1) FN1488-S.SNP.8:13742031 chr08:013742031 0 W/13742031-13742031 FN1488-S Single Base Substitution G-T INTRON Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1488-S.SNP.8:13742032 chr08:013742032 0 W/13742032-13742032 FN1488-S Single Base Substitution A-T INTRON Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3548-S.SNP.8:13745654 chr08:013745654 0 W/13745654-13745654 FN3548-S SNP T -> A AC=1;AN=188;BQB=0.605733;DP=2697;DP4=1414,1203,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.33546e-09;MQSB=0.997917;RPB=0.524116;SGB=53.7007;VDB=0.997465;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|17|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|16|1) FN3294-S.SNP.8:13746290 chr08:013746290 0 W/13746290-13746290 FN3294-S SNP A -> G AC=2;AN=184;BQB=0.999643;DP=2801;DP4=1270,1360,6,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.11496e-13;MQSB=0.953648;RPB=0.627655;SGB=112.047;VDB=0.148768;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|17|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|16|1) FN2676-S.SNP.8:13753851 chr08:013753851 0 W/13753851-13753851 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.416203;DP=4716;DP4=1808,2710,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.53738e-09;MQSB=0.193107;RPB=0.70642;SGB=32.0901;VDB=0.329881;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|12|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|11|1) FN801-S.SNP.8:13756908 chr08:013756908 0 W/13756908-13756908 FN801-S Single Base Substitution G-A INTRON HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN448-S.SNP.8:13757954 chr08:013757954 0 W/13757954-13757954 FN448-S Single Base Substitution G-T INTRON HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3627-S.SNP.8:13764358 chr08:013764358 0 W/13764358-13764358 FN3627-S SNP A -> G AC=2;AN=190;BQB=0.90675;DP=2740;DP4=1126,1496,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.40117e-14;MQSB=0.990671;RPB=0.261931;SGB=46.6446;VDB=0.245499;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|3|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|2|1) FN3627-S.SNP.8:13764360 chr08:013764360 0 W/13764360-13764360 FN3627-S SNP A -> G AC=2;AN=190;BQB=0.936909;DP=2732;DP4=1110,1486,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.67803e-15;MQSB=0.958593;RPB=0.324297;SGB=71.6393;VDB=0.241824;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|3|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|2|1) FN3627-S.SNP.8:13764363 chr08:013764363 0 W/13764363-13764363 FN3627-S SNP G -> T AC=2;AN=190;BQB=0.755908;DP=2718;DP4=1130,1462,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63984e-14;MQSB=0.994201;RPB=0.808589;SGB=18.096;VDB=0.604831;EFF=INTRON(MODIFIER||||1058|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.1|3|1),INTRON(MODIFIER||||948|LOC_Os08g22864|protein_coding|CODING|LOC_Os08g22864.2|2|1) FN3730-S.SNP.8:13768541 chr08:013768541 0 W/13768541-13768541 FN3730-S SNP A -> T AC=2;AN=190;BQB=0.868424;DP=2870;DP4=1151,1514,26,33;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0156794;MQB=9.088e-08;MQSB=0.858778;RPB=0.998831;SGB=155.468;VDB=0.885913;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.8:13769139 chr08:013769139 0 W/13769139-13769139 FN852-S Single Base Substitution T-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN858-S.SNP.8:13772864 chr08:013772864 0 W/13772864-13772864 FN858-S Single Base Substitution C-A INTERGENIC HOMO SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN4206-S.SNP.8:13773642 chr08:013773642 0 W/13773642-13773642 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.911025;DP=2688;DP4=1194,1393,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.66767e-10;MQSB=0.999467;RPB=0.986407;SGB=61.2001;VDB=0.76317;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G122|362|LOC_Os08g22890|protein_coding|CODING|LOC_Os08g22890.1|2|1) FN-72.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN-72 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN1272-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN1272-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1462-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN1462-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1645-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN1645-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN1718-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN1718-S SNP G -> A AC=2;AN=188;BQB=0.100077;DP=2198;DP4=1009,1151,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.08168e-08;MQSB=0.999599;RPB=0.0626328;SGB=31.1628;VDB=0.960877;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN2295.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN2295 SNP G -> A AC=1;AN=192;BQB=0.867305;DP=4582;DP4=2112,2226,10,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000218245;MQB=1.35549e-15;MQSB=0.985323;RPB=0.918863;SGB=-4.61041;VDB=0.0878926;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN2697-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN2697-S SNP G -> A AC=2;AN=200;BQB=0.955536;DP=4564;DP4=2016,2310,8,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.6423e-13;MQSB=0.998275;RPB=0.966498;SGB=86.5007;VDB=0.19611;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN3527-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN3527-S SNP G -> A AC=2;AN=188;BQB=0.762798;DP=3374;DP4=1562,1721,17,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.45305e-17;MQSB=0.969458;RPB=0.924192;SGB=153.475;VDB=0.690437;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN3769-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN3769-S SNP G -> A AC=2;AN=190;BQB=0.995632;DP=3163;DP4=1467,1596,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.3074e-12;MQSB=0.997077;RPB=0.54809;SGB=90.0802;VDB=0.691746;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN3889-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.904908;DP=2612;DP4=1188,1327,4,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.92447e-09;MQSB=0.999871;RPB=0.91766;SGB=55.806;VDB=0.979791;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN4074-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.676883;DP=3323;DP4=1546,1706,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.39538e-10;MQSB=0.964889;RPB=0.873044;SGB=53.182;VDB=0.619524;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN4344-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.876308;DP=2660;DP4=1190,1388,13,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.59876e-16;MQSB=0.997972;RPB=0.915987;SGB=86.5178;VDB=0.985166;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L164|549|LOC_Os08g22910|protein_coding|CODING|LOC_Os08g22910.1|1|1) FN441-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN441-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN512-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN512-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN669-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN669-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN791-S.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 FN791-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. W470-2-1.SNP.8:13777220 chr08:013777220 0 W/13777220-13777220 W470-2-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN846-S.SNP.8:13782991 chr08:013782991 0 W/13782991-13782991 FN846-S Single Base Substitution C-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN451-S.SNP.8:13808603 chr08:013808603 0 W/13808603-13808603 FN451-S Single Base Substitution C-T INTRON HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3455-S.SNP.8:13812647 chr08:013812647 0 W/13812647-13812647 FN3455-S SNP C -> G AC=2;AN=184;BQB=0.999922;DP=2665;DP4=1251,1322,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.69651e-16;MQSB=0.989208;RPB=0.999485;SGB=116.569;VDB=0.897172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.8:13813239 chr08:013813239 0 W/13813239-13813239 FN1188-S Single Base Substitution A-T INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1561-S.SNP.8:13813346 chr08:013813346 0 W/13813346-13813346 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1179-S.SNP.8:13815414 chr08:013815414 0 W/13815414-13815414 FN1179-S Single Base Substitution G-C INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN409-S.SNP.8:13816574 chr08:013816574 0 W/13816574-13816574 FN409-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. W607-2-1.SNP.8:13817288 chr08:013817288 0 W/13817288-13817288 W607-2-1 Single Base Substitution A-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN664-S.SNP.8:13817872 chr08:013817872 0 W/13817872-13817872 FN664-S Single Base Substitution C-T INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN4163-S.SNP.8:13820278 chr08:013820278 0 W/13820278-13820278 FN4163-S SNP T -> C AC=1;AN=170;BQB=0.864648;DP=2080;DP4=1356,655,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0629808;MQB=0.626811;MQSB=1.16679e-15;RPB=0.982101;SGB=25.6601;VDB=0.941968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1523-S.SNP.8:13820887 chr08:013820887 0 W/13820887-13820887 FN1523-S Single Base Substitution G-C INTERGENIC HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN4031-S.SNP.8:13833201 chr08:013833201 0 W/13833201-13833201 FN4031-S SNP G -> A AC=1;AN=168;BQB=0.969702;DP=1732;DP4=1202,464,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0467667;MQB=0.751454;MQSB=0.523503;RPB=0.494244;SGB=38.8805;VDB=0.192198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.8:13839330 chr08:013839330 0 W/13839330-13839330 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2174-S.SNP.8:13841763 chr08:013841763 0 W/13841763-13841763 FN2174-S SNP T -> A AC=1;AN=168;BQB=0.00443554;DP=2723;DP4=1060,1633,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0190966;MQB=0.140632;MQSB=3.33882e-37;RPB=0.996378;SGB=-205.192;VDB=0.426775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.8:13845059 chr08:013845059 0 W/13845059-13845059 FN3711-S SNP G -> T AC=1;AN=190;BQB=0.593643;DP=2627;DP4=1206,1325,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52772e-07;MQSB=0.652123;RPB=0.97188;SGB=23.6597;VDB=0.775517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.8:13855477 chr08:013855477 0 W/13855477-13855477 FN2290 SNP G -> A AC=1;AN=192;BQB=0.194396;DP=4842;DP4=2402,2136,20,11;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0113589;MQB=0.0083705;MQSB=0.110549;RPB=0.319996;SGB=-41.8626;VDB=0.987262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.8:13858770 chr08:013858770 0 W/13858770-13858770 FN3557-S SNP G -> C AC=2;AN=188;BQB=0.969939;DP=3457;DP4=1633,1730,22,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.20001e-23;MQSB=0.786418;RPB=0.0216372;SGB=149.37;VDB=0.0185376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3447-S.SNP.8:13861730 chr08:013861730 0 W/13861730-13861730 FN3447-S SNP C -> G AC=2;AN=184;BQB=0.761151;DP=4144;DP4=1767,2260,14,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000482625;MQB=1.89466e-22;MQSB=0.968451;RPB=0.89971;SGB=166.309;VDB=0.325873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.8:13863063 chr08:013863063 0 W/13863063-13863063 FN1114-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g23020 retrotransposon protein, putative, unclassified, expressed SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3425-S.SNP.8:13867915 chr08:013867915 0 W/13867915-13867915 FN3425-S SNP A -> T AC=2;AN=184;BQB=0.996314;DP=2978;DP4=1605,1250,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00100739;MQB=1.4363e-16;MQSB=0.72086;RPB=0.43868;SGB=102.662;VDB=0.639627;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.8:13870341 chr08:013870341 0 W/13870341-13870341 FN930-S Single Base Substitution G-C INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN3853-S.SNP.8:13871607 chr08:013871607 0 W/13871607-13871607 FN3853-S SNP A -> G AC=1;AN=158;BQB=1.01027e-07;DP=2560;DP4=1282,1068,13,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.3784e-09;MQSB=0.869037;RPB=0.915185;SGB=57.6596;VDB=0.530999;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.8:13873004 chr08:013873004 0 W/13873004-13873004 FN4077-S SNP C -> G AC=2;AN=182;BQB=0.955169;DP=2983;DP4=1425,1477,9,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.07826e-11;MQSB=0.97858;RPB=0.929102;SGB=75.6874;VDB=0.58502;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H66D|1296|LOC_Os08g23050|protein_coding|CODING|LOC_Os08g23050.1|1|1) FN1323-S.SNP.8:13877747 chr08:013877747 0 W/13877747-13877747 FN1323-S Single Base Substitution C-G INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN2433.SNP.8:13879192 chr08:013879192 0 W/13879192-13879192 FN2433 SNP A -> G AC=1;AN=200;BQB=0.978855;DP=4507;DP4=2198,2047,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00177502;MQB=5.75921e-11;MQSB=0.0133485;RPB=0.902626;SGB=91.1059;VDB=0.935527;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.8:13879826 chr08:013879826 0 W/13879826-13879826 FN951-S Single Base Substitution C-T INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3572-S.SNP.8:13881384 chr08:013881384 0 W/13881384-13881384 FN3572-S SNP G -> T AC=2;AN=188;BQB=0.683921;DP=2511;DP4=1350,1072,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.46116e-17;MQSB=0.159255;RPB=0.928482;SGB=103.307;VDB=0.603537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.8:13881386 chr08:013881386 0 W/13881386-13881386 FN3572-S SNP A -> T AC=2;AN=188;BQB=0.792103;DP=2487;DP4=1317,1023,20,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.31839e-19;MQSB=0.322672;RPB=0.749015;SGB=69.3122;VDB=0.593022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.8:13882024 chr08:013882024 0 W/13882024-13882024 FN3453-S SNP C -> T AC=2;AN=184;BQB=0.991128;DP=2605;DP4=1216,1288,14,24;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00153551;MQB=2.65872e-14;MQSB=0.997733;RPB=0.968124;SGB=123.793;VDB=0.371257;EFF=INTERGENIC(MODIFIER||||||||||1) FN260-S.SNP.8:13883143 chr08:013883143 0 W/13883143-13883143 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3376-S.SNP.8:13885817 chr08:013885817 0 W/13885817-13885817 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.998708;DP=4234;DP4=2277,1749,116,13;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.150685;MQB=1.57062e-38;MQSB=0;RPB=7.056e-06;SGB=-2309.65;VDB=5.39679e-16;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R817|930|LOC_Os08g23060|protein_coding|CODING|LOC_Os08g23060.1|1|1) FN2468.SNP.8:13901367 chr08:013901367 0 W/13901367-13901367 FN2468 SNP G -> A AC=1;AN=200;BQB=0.949771;DP=4125;DP4=1788,2092,9,12;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0889697;MQB=0.0253929;MQSB=1.54183e-05;RPB=0.833502;SGB=39.9056;VDB=0.854627;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P567L|927|LOC_Os08g23080|protein_coding|CODING|LOC_Os08g23080.1|3|1) FN-283.SNP.8:13901771 chr08:013901771 0 W/13901771-13901771 FN-283 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3976-S.SNP.8:13908491 chr08:013908491 0 W/13908491-13908491 FN3976-S SNP C -> T AC=1;AN=168;BQB=0.625924;DP=2768;DP4=1261,1362,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.00108382;MQB=7.68408e-09;MQSB=0.00293792;RPB=0.843245;SGB=-13.6493;VDB=0.913687;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K254|388|LOC_Os08g23090|protein_coding|CODING|LOC_Os08g23090.1|3|1) FN-222.SNP.8:13909689 chr08:013909689 0 W/13909689-13909689 FN-222 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g23090 retrotransposon protein, putative, unclassified, expressed SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN-222.SNP.8:13909690 chr08:013909690 0 W/13909690-13909690 FN-222 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g23090 retrotransposon protein, putative, unclassified, expressed SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN430-S.SNP.8:13911424 chr08:013911424 0 W/13911424-13911424 FN430-S Single Base Substitution C-T INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3057-S.SNP.8:13914475 chr08:013914475 0 W/13914475-13914475 FN3057-S SNP T -> C AC=1;AN=184;BQB=0.982442;DP=2163;DP4=967,1116,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13124e-07;MQSB=0.00282636;RPB=0.567763;SGB=2.23696;VDB=0.79373;EFF=INTRON(MODIFIER||||270|LOC_Os08g23100|protein_coding|CODING|LOC_Os08g23100.1|4|1),INTRON(MODIFIER||||270|LOC_Os08g23100|protein_coding|CODING|LOC_Os08g23100.2|4|1) FN2358.SNP.8:13921997 chr08:013921997 0 W/13921997-13921997 FN2358 SNP G -> T AC=1;AN=192;BQB=0.999975;DP=5132;DP4=2527,2298,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194856;MQB=1.52306e-13;MQSB=0.838873;RPB=0.963906;SGB=-38.813;VDB=0.228048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M91I|380|LOC_Os08g23110|protein_coding|CODING|LOC_Os08g23110.1|2|1) FN2452.SNP.8:13925966 chr08:013925966 0 W/13925966-13925966 FN2452 SNP C -> G AC=2;AN=200;BQB=0.58593;DP=3255;DP4=901,1982,13,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000614439;MQB=6.5203e-10;MQSB=0.165063;RPB=0.776186;SGB=-8.87404;VDB=0.163824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.8:13926643 chr08:013926643 0 W/13926643-13926643 FN2780-S SNP A -> T AC=1;AN=198;BQB=0.41103;DP=4652;DP4=2131,2344,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.66167e-08;MQSB=0.957463;RPB=0.906115;SGB=49.5489;VDB=0.377547;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.8:13930074 chr08:013930074 0 W/13930074-13930074 FN437-S Single Base Substitution T-C INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN1022-S.SNP.8:13937646 chr08:013937646 0 W/13937646-13937646 FN1022-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3819-S.SNP.8:13943952 chr08:013943952 0 W/13943952-13943952 FN3819-S SNP C -> A AC=1;AN=190;BQB=0.88283;DP=2933;DP4=1778,1058,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.33313e-07;MQSB=0.858247;RPB=0.891036;SGB=10.8904;VDB=0.297266;EFF=UTR_5_PRIME(MODIFIER||49||283|LOC_Os08g23140|protein_coding|CODING|LOC_Os08g23140.1|1|1),UTR_5_PRIME(MODIFIER||49||162|LOC_Os08g23140|protein_coding|CODING|LOC_Os08g23140.2|1|1) FN2266-S.SNP.8:13948952 chr08:013948952 0 W/13948952-13948952 FN2266-S SNP A -> G AC=1;AN=190;BQB=0.514683;DP=5194;DP4=2438,2375,6,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07122e-13;MQSB=0.741264;RPB=0.266861;SGB=94.6341;VDB=0.676446;EFF=UTR_3_PRIME(MODIFIER||188||162|LOC_Os08g23140|protein_coding|CODING|LOC_Os08g23140.2|8|1),INTRON(MODIFIER||||283|LOC_Os08g23140|protein_coding|CODING|LOC_Os08g23140.1|7|1) FN2268-S.SNP.8:13957383 chr08:013957383 0 W/13957383-13957383 FN2268-S SNP G -> A AC=2;AN=190;BQB=0.706493;DP=4589;DP4=2000,2043,34,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000435825;MQB=2.24336e-32;MQSB=0.0618464;RPB=0.995153;SGB=232.142;VDB=0.525019;EFF=INTRON(MODIFIER||||384|LOC_Os08g23150|protein_coding|CODING|LOC_Os08g23150.1|8|1) FN2226-S.SNP.8:13958274 chr08:013958274 0 W/13958274-13958274 FN2226-S SNP G -> A AC=2;AN=190;BQB=0.606899;DP=4974;DP4=1894,2717,15,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.36099e-22;MQSB=0.86846;RPB=0.935669;SGB=41.4042;VDB=0.771779;EFF=UTR_3_PRIME(MODIFIER||1||384|LOC_Os08g23150|protein_coding|CODING|LOC_Os08g23150.1|10|1) FN490-S.SNP.8:13964633 chr08:013964633 0 W/13964633-13964633 FN490-S Single Base Substitution C-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN411-S.SNP.8:13976685 chr08:013976685 0 W/13976685-13976685 FN411-S Single Base Substitution C-G INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2701-S.SNP.8:13988786 chr08:013988786 0 W/13988786-13988786 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.0492535;DP=4639;DP4=2124,2226,16,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02561e-07;MQSB=0.969411;RPB=0.247853;SGB=34.6953;VDB=0.274285;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.8:13998694 chr08:013998694 0 W/13998694-13998694 FN461-S Single Base Substitution G-T INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3482-S.SNP.8:14002684 chr08:014002684 0 W/14002684-14002684 FN3482-S SNP T -> G AC=1;AN=184;BQB=0.533225;DP=3032;DP4=1106,1749,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000329815;MQB=0.000163954;MQSB=0.494445;RPB=0.832135;SGB=5.28054;VDB=0.376446;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.8:14007570 chr08:014007570 0 W/14007570-14007570 FN747-S Single Base Substitution A-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. W453-3-1.SNP.8:14008929 chr08:014008929 0 W/14008929-14008929 W453-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN3430-S.SNP.8:14023634 chr08:014023634 0 W/14023634-14023634 FN3430-S SNP T -> G AC=2;AN=184;BQB=0.957867;DP=2708;DP4=1305,1308,9,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.82798e-13;MQSB=0.912472;RPB=0.526899;SGB=89.4385;VDB=0.496531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.8:14024564 chr08:014024564 0 W/14024564-14024564 FN2461 SNP G -> A AC=1;AN=200;BQB=0.939572;DP=4092;DP4=1961,1898,4,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.105374;MQSB=0.998151;RPB=0.959849;SGB=35.8441;VDB=0.712841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.8:14024680 chr08:014024680 0 W/14024680-14024680 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.878581;DP=3129;DP4=1578,1450,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.80725e-06;MQSB=0.00025822;RPB=0.569696;SGB=32.5467;VDB=0.0797555;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.8:14025765 chr08:014025765 0 W/14025765-14025765 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.998985;DP=3488;DP4=1375,1924,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00458716;MQB=0.000128007;MQSB=0.00331949;RPB=0.471559;SGB=16.3688;VDB=0.079257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.8:14026605 chr08:014026605 0 W/14026605-14026605 FN1458-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g23230 expressed protein SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1617-S.SNP.8:14026605 chr08:014026605 0 W/14026605-14026605 FN1617-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g23230 expressed protein SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3293-S.SNP.8:14026605 chr08:014026605 0 W/14026605-14026605 FN3293-S SNP C -> A AC=1;AN=184;BQB=0.901147;DP=3725;DP4=1943,1649,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0362416;MQB=0.987244;MQSB=3.46518e-08;RPB=0.559275;SGB=98.4821;VDB=0.604811;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E113D|197|LOC_Os08g23230|protein_coding|CODING|LOC_Os08g23230.1|1|1) FN513-S.SNP.8:14026605 chr08:014026605 0 W/14026605-14026605 FN513-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g23230 expressed protein SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN758-S.SNP.8:14026605 chr08:014026605 0 W/14026605-14026605 FN758-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g23230 expressed protein SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN804-S.SNP.8:14028313 chr08:014028313 0 W/14028313-14028313 FN804-S Single Base Substitution C-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN804-S.SNP.8:14028314 chr08:014028314 0 W/14028314-14028314 FN804-S Single Base Substitution C-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3292-S.SNP.8:14028457 chr08:014028457 0 W/14028457-14028457 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.479346;DP=3331;DP4=1717,1516,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0483338;MQB=0.981555;MQSB=1.57894e-32;RPB=0.851361;SGB=60.4004;VDB=0.261798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.8:14031261 chr08:014031261 0 W/14031261-14031261 FN2587-S SNP G -> C AC=2;AN=198;BQB=0.929605;DP=3645;DP4=1613,1820,18,19;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.47095e-15;MQSB=0.396435;RPB=0.628677;SGB=122.837;VDB=0.532259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Cac|D115H|572|LOC_Os08g23240|protein_coding|CODING|LOC_Os08g23240.1|2|1) FN893-S.SNP.8:14031356 chr08:014031356 0 W/14031356-14031356 FN893-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3516-S.SNP.8:14032491 chr08:014032491 0 W/14032491-14032491 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.947483;DP=4777;DP4=2421,2295,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.6835e-07;MQSB=0.999345;RPB=0.59955;SGB=44.4357;VDB=0.838691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E280K|572|LOC_Os08g23240|protein_coding|CODING|LOC_Os08g23240.1|3|1) FN2201-S.SNP.8:14043796 chr08:014043796 0 W/14043796-14043796 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.87272;DP=4591;DP4=2058,2260,26,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.40122e-20;MQSB=0.791691;RPB=0.435476;SGB=135.609;VDB=0.173061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.8:14048393 chr08:014048393 0 W/14048393-14048393 FN3381-S SNP G -> C AC=1;AN=184;BQB=0.878165;DP=2700;DP4=1300,1282,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.72401e-08;MQSB=1.31744e-07;RPB=0.85781;SGB=6.80232;VDB=0.937711;EFF=UTR_5_PRIME(MODIFIER||50||899|LOC_Os08g23280|protein_coding|CODING|LOC_Os08g23280.1|1|1) FN_815-4-1.SNP.8:14054782 chr08:014054782 0 W/14054782-14054782 FN_815-4-1 Single Base Substitution A-G Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN1182-S.SNP.8:14057839 chr08:014057839 0 W/14057839-14057839 FN1182-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g23290 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN543-S.SNP.8:14060406 chr08:014060406 0 W/14060406-14060406 FN543-S Single Base Substitution C-A INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3663-S.SNP.8:14065173 chr08:014065173 0 W/14065173-14065173 FN3663-S SNP A -> G AC=1;AN=190;BQB=0.997786;DP=2922;DP4=1350,1472,1,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0574949;MQB=0.0472983;MQSB=2.31206e-07;RPB=0.971523;SGB=35.4339;VDB=0.792725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.8:14069721 chr08:014069721 0 W/14069721-14069721 FN1045-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1450-S.SNP.8:14070059 chr08:014070059 0 W/14070059-14070059 FN1450-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g23310 transposon protein, putative, unclassified, expressed SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3506-S.SNP.8:14070188 chr08:014070188 0 W/14070188-14070188 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.33921;DP=3539;DP4=1873,1601,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000282566;MQB=5.35491e-07;MQSB=0.00951989;RPB=0.739563;SGB=62.6088;VDB=0.719175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1743I|2024|LOC_Os08g23310|protein_coding|CODING|LOC_Os08g23310.1|2|1) FN621-S.SNP.8:14075713 chr08:014075713 0 W/14075713-14075713 FN621-S Single Base Substitution G-A INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN-247.SNP.8:14076997 chr08:014076997 0 W/14076997-14076997 FN-247 Single Base Substitution G-T INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3916-S.SNP.8:14079423 chr08:014079423 0 W/14079423-14079423 FN3916-S SNP C -> A AC=2;AN=158;BQB=0.997635;DP=2068;DP4=882,1106,11,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.60897e-10;MQSB=0.763121;RPB=0.132465;SGB=77.6532;VDB=0.436514;EFF=INTRON(MODIFIER||||418|LOC_Os08g23320|protein_coding|CODING|LOC_Os08g23320.1|8|1) FN3095-S.SNP.8:14097393 chr08:014097393 0 W/14097393-14097393 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.48515;DP=3396;DP4=1673,1604,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000469747;MQSB=0.716789;RPB=0.512472;SGB=28.7043;VDB=0.358713;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.8:14101329 chr08:014101329 0 W/14101329-14101329 FN896-S Single Base Substitution C-T INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2617-S.SNP.8:14118255 chr08:014118255 0 W/14118255-14118255 FN2617-S SNP A -> G AC=1;AN=198;BQB=0.8836;DP=4321;DP4=2139,1987,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.09245e-15;MQSB=0.960265;RPB=0.570866;SGB=90.4807;VDB=0.769757;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.8:14122863 chr08:014122863 0 W/14122863-14122863 FN-307 Single Base Substitution G-A INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2752-S.SNP.8:14123077 chr08:014123077 0 W/14123077-14123077 FN2752-S SNP A -> C AC=1;AN=200;BQB=0.658916;DP=4794;DP4=2209,2371,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.70791e-09;MQSB=0.911606;RPB=0.431371;SGB=21.6694;VDB=0.139239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.8:14127519 chr08:014127519 0 W/14127519-14127519 FN1399-S Single Base Substitution A-T INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN745-S.SNP.8:14128136 chr08:014128136 0 W/14128136-14128136 FN745-S Single Base Substitution A-C INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN-187.SNP.8:14129829 chr08:014129829 0 W/14129829-14129829 FN-187 Single Base Substitution C-T INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1488-S.SNP.8:14146283 chr08:014146283 0 W/14146283-14146283 FN1488-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1300-S.SNP.8:14153436 chr08:014153436 0 W/14153436-14153436 FN1300-S Single Base Substitution G-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN569-S.SNP.8:14166876 chr08:014166876 0 W/14166876-14166876 FN569-S Single Base Substitution A-T INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN3990-S.SNP.8:14168620 chr08:014168620 0 W/14168620-14168620 FN3990-S SNP A -> G AC=1;AN=168;BQB=0.96256;DP=2499;DP4=1114,1260,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.15433e-10;MQSB=0.993422;RPB=0.770812;SGB=65.4653;VDB=0.992022;EFF=INTRON(MODIFIER||||1085|LOC_Os08g23430|protein_coding|CODING|LOC_Os08g23430.1|12|1),INTRON(MODIFIER||||945|LOC_Os08g23430|protein_coding|CODING|LOC_Os08g23430.2|11|1) W416-6-1.SNP.8:14169544 chr08:014169544 0 W/14169544-14169544 W416-6-1 Single Base Substitution A-C INTRON HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2620-S.SNP.8:14180906 chr08:014180906 0 W/14180906-14180906 FN2620-S SNP G -> T AC=1;AN=198;BQB=0.367181;DP=4370;DP4=1848,2320,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.72491e-08;MQSB=0.736906;RPB=0.959808;SGB=31.9395;VDB=0.0542179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.8:14180907 chr08:014180907 0 W/14180907-14180907 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.902588;DP=4371;DP4=1829,2350,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.53072e-09;MQSB=0.791323;RPB=0.994269;SGB=54.5295;VDB=0.201148;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.8:14181853 chr08:014181853 0 W/14181853-14181853 FN862-S Single Base Substitution A-G INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN1300-S.SNP.8:14182665 chr08:014182665 0 W/14182665-14182665 FN1300-S Single Base Substitution C-G INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN428-S.SNP.8:14182835 chr08:014182835 0 W/14182835-14182835 FN428-S Single Base Substitution C-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN534-S.SNP.8:14189281 chr08:014189281 0 W/14189281-14189281 FN534-S Single Base Substitution C-T INTRON HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3550-S.SNP.8:14200425 chr08:014200425 0 W/14200425-14200425 FN3550-S SNP T -> A AC=1;AN=188;BQB=0.981213;DP=2593;DP4=1355,1181,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.93384e-06;MQSB=0.978152;RPB=0.587789;SGB=44.4357;VDB=0.809714;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.8:14214839 chr08:014214839 0 W/14214839-14214839 FN-227 Single Base Substitution A-C INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2331.SNP.8:14214913 chr08:014214913 0 W/14214913-14214913 FN2331 SNP T -> G AC=2;AN=192;BQB=0.23598;DP=4490;DP4=2086,2117,18,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.93657e-23;MQSB=0.898756;RPB=0.871059;SGB=204.398;VDB=0.746833;EFF=INTRON(MODIFIER||||1164|LOC_Os08g23480|protein_coding|CODING|LOC_Os08g23480.1|5|1) FN579-S.SNP.8:14215141 chr08:014215141 0 W/14215141-14215141 FN579-S Single Base Substitution G-A INTRON HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2160-S.SNP.8:14215646 chr08:014215646 0 W/14215646-14215646 FN2160-S SNP G -> A AC=2;AN=168;BQB=0.0952143;DP=2808;DP4=1690,1064,17,13;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.0128205;MQB=0.00134668;MQSB=0.962764;RPB=0.988807;SGB=-147.902;VDB=0.041979;EFF=INTRON(MODIFIER||||1164|LOC_Os08g23480|protein_coding|CODING|LOC_Os08g23480.1|5|1) FN1528-S.SNP.8:14217493 chr08:014217493 0 W/14217493-14217493 FN1528-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g23480 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3580-S.SNP.8:14222178 chr08:014222178 0 W/14222178-14222178 FN3580-S SNP T -> G AC=1;AN=188;BQB=0.772356;DP=3348;DP4=1524,1729,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.56315e-11;MQSB=0.999958;RPB=0.433145;SGB=89.8686;VDB=0.630442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.8:14224083 chr08:014224083 0 W/14224083-14224083 FN3450-S SNP A -> T AC=1;AN=184;BQB=0.754801;DP=3702;DP4=1728,1839,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.98384e-09;MQSB=0.799414;RPB=0.843007;SGB=49.835;VDB=0.995048;EFF=INTRON(MODIFIER||||291|LOC_Os08g23490|protein_coding|CODING|LOC_Os08g23490.1|2|1) FN-333.SNP.8:14224285 chr08:014224285 0 W/14224285-14224285 FN-333 Single Base Substitution T-C INTRON HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN-359.SNP.8:14226019 chr08:014226019 0 W/14226019-14226019 FN-359 Single Base Substitution G-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN2750-S.SNP.8:14229148 chr08:014229148 0 W/14229148-14229148 FN2750-S SNP A -> G AC=1;AN=200;BQB=0.971523;DP=5114;DP4=2076,2521,5,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00195542;MQB=0.00217288;MQSB=1.16312e-06;RPB=0.947959;SGB=21.6694;VDB=0.390914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.8:14238249 chr08:014238249 0 W/14238249-14238249 FN2612-S SNP A -> G AC=1;AN=198;BQB=0.893401;DP=5472;DP4=2876,2381,8,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.94423e-16;MQSB=0.991568;RPB=0.0145323;SGB=113.881;VDB=0.0235358;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.8:14239670 chr08:014239670 0 W/14239670-14239670 FN724-S Single Base Substitution A-C INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1193-S.SNP.8:14242329 chr08:014242329 0 W/14242329-14242329 FN1193-S Single Base Substitution C-A INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2442.SNP.8:14242773 chr08:014242773 0 W/14242773-14242773 FN2442 SNP G -> T AC=2;AN=200;BQB=0.875132;DP=5168;DP4=2321,2602,15,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00116099;MQB=5.33686e-18;MQSB=0.000581692;RPB=0.782134;SGB=81.5883;VDB=0.520271;EFF=INTERGENIC(MODIFIER||||||||||1) FN399-S.SNP.8:14243251 chr08:014243251 0 W/14243251-14243251 FN399-S Single Base Substitution G-T INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN-99.SNP.8:14247548 chr08:014247548 0 W/14247548-14247548 FN-99 Single Base Substitution C-T INTERGENIC HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN689-S.SNP.8:14247548 chr08:014247548 0 W/14247548-14247548 FN689-S Single Base Substitution C-T INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-168.SNP.8:14249628 chr08:014249628 0 W/14249628-14249628 FN-168 Single Base Substitution C-T INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1916.SNP.8:14252467 chr08:014252467 0 W/14252467-14252467 FN1916 Single Base Substitution A-G HET LOC_Os08g23540 retrotransposon protein, putative, unclassified, expressed SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1268-S.SNP.8:14253738 chr08:014253738 0 W/14253738-14253738 FN1268-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. W416-6-1.SNP.8:14260305 chr08:014260305 0 W/14260305-14260305 W416-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1639-S.SNP.8:14260323 chr08:014260323 0 W/14260323-14260323 FN1639-S Single Base Substitution C-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3851-S.SNP.8:14264651 chr08:014264651 0 W/14264651-14264651 FN3851-S SNP A -> T AC=1;AN=158;BQB=0.853685;DP=2302;DP4=1091,1149,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.0181982;MQSB=0.000125199;RPB=0.858458;SGB=38.3284;VDB=0.379326;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.8:14271514 chr08:014271514 0 W/14271514-14271514 FN908-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g23580 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN576-S.SNP.8:14275996 chr08:014275996 0 W/14275996-14275996 FN576-S Single Base Substitution C-T INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3411-S.SNP.8:14282819 chr08:014282819 0 W/14282819-14282819 FN3411-S SNP G -> A AC=1;AN=184;BQB=0.956618;DP=3147;DP4=1782,1272,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.0461e-05;MQSB=0.828626;RPB=0.25231;SGB=21.6609;VDB=0.529034;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H47|278|LOC_Os08g23590|protein_coding|CODING|LOC_Os08g23590.1|2|1) FN1501-S.SNP.8:14287944 chr08:014287944 0 W/14287944-14287944 FN1501-S Single Base Substitution A-G INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2169-S.SNP.8:14291905 chr08:014291905 0 W/14291905-14291905 FN2169-S SNP C -> T AC=1;AN=168;BQB=0.214826;DP=3570;DP4=1744,1774,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000560224;MQB=4.4318e-09;MQSB=0.997871;RPB=0.546363;SGB=-90.3546;VDB=0.814157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A300V|738|LOC_Os08g23610|protein_coding|CODING|LOC_Os08g23610.1|2|1) FN3359-S.SNP.8:14303307 chr08:014303307 0 W/14303307-14303307 FN3359-S SNP G -> A AC=1;AN=184;BQB=0.795465;DP=4158;DP4=2169,1899,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0161135;MQB=0.000803053;MQSB=9.77218e-14;RPB=0.725072;SGB=60.4004;VDB=0.864636;EFF=INTRON(MODIFIER||||1624|LOC_Os08g23630|protein_coding|CODING|LOC_Os08g23630.1|3|1) FN3591-S.SNP.8:14305170 chr08:014305170 0 W/14305170-14305170 FN3591-S SNP C -> A AC=1;AN=188;BQB=0.998613;DP=4136;DP4=2102,1950,16,17;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000483559;MQB=2.5322e-09;MQSB=0.0629601;RPB=0.78407;SGB=144.388;VDB=0.165764;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G1275|1624|LOC_Os08g23630|protein_coding|CODING|LOC_Os08g23630.1|4|1) FN2122-S.SNP.8:14317904 chr08:014317904 0 W/14317904-14317904 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.599942;DP=3381;DP4=1557,1769,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0050281;MQB=0.91956;MQSB=0.750885;RPB=0.873459;SGB=7.05233;VDB=0.532804;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1033|1598|LOC_Os08g23654|protein_coding|CODING|LOC_Os08g23654.1|6|1) FN-114.SNP.8:14319764 chr08:014319764 0 W/14319764-14319764 FN-114 Single Base Substitution C-T INTRON HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN4149-S.SNP.8:14319764 chr08:014319764 0 W/14319764-14319764 FN4149-S SNP C -> T AC=2;AN=170;BQB=0.974651;DP=2603;DP4=1094,1401,11,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.16892e-12;MQSB=0.730337;RPB=0.972078;SGB=69.3045;VDB=0.390897;EFF=INTRON(MODIFIER||||90|LOC_Os08g23670|protein_coding|CODING|LOC_Os08g23670.1|2|1) FN973-S.SNP.8:14323586 chr08:014323586 0 W/14323586-14323586 FN973-S Single Base Substitution A-G INTRON HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2629-S.SNP.8:14342046 chr08:014342046 0 W/14342046-14342046 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.714119;DP=4808;DP4=2279,2306,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.81035e-15;MQSB=0.515655;RPB=0.797985;SGB=104.921;VDB=0.897951;EFF=INTRON(MODIFIER||||258|LOC_Os08g23710|protein_coding|CODING|LOC_Os08g23710.1|3|1) FN776-S.SNP.8:14342107 chr08:014342107 0 W/14342107-14342107 FN776-S Single Base Substitution A-G INTRON HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN772-S.SNP.8:14366482 chr08:014366482 0 W/14366482-14366482 FN772-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3838-S.SNP.8:14368835 chr08:014368835 0 W/14368835-14368835 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.9487;DP=3044;DP4=1655,1270,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00689598;MQSB=1.85431e-22;RPB=0.866298;SGB=35.4339;VDB=0.460862;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.8:14383305 chr08:014383305 0 W/14383305-14383305 FN779-S Single Base Substitution C-T INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3517-S.SNP.8:14385480 chr08:014385480 0 W/14385480-14385480 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.999631;DP=3942;DP4=1998,1867,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0306951;MQB=0.293142;MQSB=0.00109737;RPB=0.366543;SGB=85.3253;VDB=0.706942;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D1503N|2089|LOC_Os08g23770|protein_coding|CODING|LOC_Os08g23770.1|5|1) FN1744-S.SNP.8:14392053 chr08:014392053 0 W/14392053-14392053 FN1744-S SNP G -> A AC=1;AN=188;BQB=0.764896;DP=1760;DP4=1223,505,6,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.05685e-05;MQSB=0.833708;RPB=0.394189;SGB=26.2637;VDB=0.464927;EFF=INTRON(MODIFIER||||2089|LOC_Os08g23770|protein_coding|CODING|LOC_Os08g23770.1|2|1) FN598-S.SNP.8:14395283 chr08:014395283 0 W/14395283-14395283 FN598-S Single Base Substitution C-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3407-S.SNP.8:14399601 chr08:014399601 0 W/14399601-14399601 FN3407-S SNP T -> A AC=1;AN=184;BQB=0.997257;DP=2422;DP4=1274,1101,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16579e-05;MQSB=0.873441;RPB=0.455792;SGB=30.6558;VDB=0.301859;EFF=INTRON(MODIFIER||||643|LOC_Os08g23780|protein_coding|CODING|LOC_Os08g23780.1|5|1) FN2795-S.SNP.8:14400145 chr08:014400145 0 W/14400145-14400145 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.983367;DP=4570;DP4=2314,2020,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.26562e-13;MQSB=0.947523;RPB=0.166499;SGB=72.5051;VDB=0.152053;EFF=INTRON(MODIFIER||||643|LOC_Os08g23780|protein_coding|CODING|LOC_Os08g23780.1|5|1) FN2395.SNP.8:14404139 chr08:014404139 0 W/14404139-14404139 FN2395 SNP G -> A AC=2;AN=200;BQB=0.995318;DP=3906;DP4=1796,1874,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.10665e-18;MQSB=0.961858;RPB=0.523399;SGB=94.3471;VDB=0.515887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1515-S.SNP.8:14411307 chr08:014411307 0 W/14411307-14411307 FN1515-S Single Base Substitution T-A INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1270-S.SNP.8:14411674 chr08:014411674 0 W/14411674-14411674 FN1270-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1630-S.SNP.8:14412828 chr08:014412828 0 W/14412828-14412828 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2383.SNP.8:14416853 chr08:014416853 0 W/14416853-14416853 FN2383 SNP C -> G AC=1;AN=192;BQB=0.668058;DP=5029;DP4=2559,2109,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.62317e-09;MQSB=0.786287;RPB=0.990843;SGB=58.3392;VDB=0.894812;EFF=SPLICE_SITE_REGION(LOW||||375|LOC_Os08g23810|protein_coding|CODING|LOC_Os08g23810.1|6|1),SPLICE_SITE_REGION(LOW||||375|LOC_Os08g23810|protein_coding|CODING|LOC_Os08g23810.2|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V168|375|LOC_Os08g23810|protein_coding|CODING|LOC_Os08g23810.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V168|375|LOC_Os08g23810|protein_coding|CODING|LOC_Os08g23810.2|6|1) FN1282-S.SNP.8:14432424 chr08:014432424 0 W/14432424-14432424 FN1282-S Single Base Substitution C-T INTRON HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1163-S.SNP.8:14451542 chr08:014451542 0 W/14451542-14451542 FN1163-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3806-S.SNP.8:14482333 chr08:014482333 0 W/14482333-14482333 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.96212;DP=2518;DP4=1271,1128,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42221e-06;MQSB=0.818826;RPB=0.963808;SGB=39.9877;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.8:14487399 chr08:014487399 0 W/14487399-14487399 FN2304 SNP C -> T AC=1;AN=192;BQB=0.787586;DP=4536;DP4=2078,2176,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=0.000356553;MQSB=3.45985e-06;RPB=0.869627;SGB=54.0374;VDB=0.563978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.8:14495079 chr08:014495079 0 W/14495079-14495079 FN1540-S Single Base Substitution A-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3360-S.SNP.8:14499464 chr08:014499464 0 W/14499464-14499464 FN3360-S SNP T -> G AC=1;AN=184;BQB=0.521402;DP=3007;DP4=1563,1358,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0;MQB=0.999924;MQSB=0.00126286;RPB=0.00344363;SGB=28.3187;VDB=0.00565481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.8:14500603 chr08:014500603 0 W/14500603-14500603 FN2536-S SNP G -> T AC=1;AN=198;BQB=0.321389;DP=4150;DP4=2115,1764,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=30;MQ0F=0;MQB=0.914145;MQSB=0.0171358;RPB=0.573983;SGB=26.7492;VDB=0.802788;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.8:14500603 chr08:014500603 0 W/14500603-14500603 FN4117-S SNP G -> T AC=2;AN=182;BQB=0.896314;DP=3237;DP4=1640,1503,13,11;HOB=0.0217365;ICB=0.494567;MQ=28;MQ0F=0;MQB=0.0714562;MQSB=2.10407e-06;RPB=0.0165961;SGB=74.2472;VDB=0.00324781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.8:14513496 chr08:014513496 0 W/14513496-14513496 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.776417;DP=4194;DP4=1943,2104,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.00166351;MQSB=0.118384;RPB=0.489327;SGB=35.7638;VDB=0.2098;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S264|649|LOC_Os08g23990|protein_coding|CODING|LOC_Os08g23990.1|3|1) FN3376-S.SNP.8:14514557 chr08:014514557 0 W/14514557-14514557 FN3376-S SNP C -> A AC=1;AN=184;BQB=0.996488;DP=2800;DP4=1400,1286,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=1.75317e-12;MQSB=0.37853;RPB=0.456178;SGB=84.9167;VDB=0.028046;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S433*|649|LOC_Os08g23990|protein_coding|CODING|LOC_Os08g23990.1|5|1) FN3912-S.SNP.8:14517859 chr08:014517859 0 W/14517859-14517859 FN3912-S SNP G -> C AC=1;AN=158;BQB=0.999889;DP=2229;DP4=1128,1023,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.00217436;MQSB=0.0215977;RPB=0.752232;SGB=25.2211;VDB=0.324191;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.8:14518896 chr08:014518896 0 W/14518896-14518896 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.996027;DP=4772;DP4=2091,2419,8,22;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0;MQB=0.0440907;MQSB=4.53871e-06;RPB=0.234164;SGB=132.552;VDB=0.209278;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.8:14521588 chr08:014521588 0 W/14521588-14521588 FN_N1-151-7 Single Base Substitution C-T HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN713-S.SNP.8:14522525 chr08:014522525 0 W/14522525-14522525 FN713-S Single Base Substitution C-T INTRON HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2614-S.SNP.8:14570311 chr08:014570311 0 W/14570311-14570311 FN2614-S SNP A -> T AC=1;AN=198;BQB=0.717412;DP=3590;DP4=1982,1380,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0;MQB=0.00774951;MQSB=0.226935;RPB=0.00701933;SGB=58.1246;VDB=0.0195503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.8:14571144 chr08:014571144 0 W/14571144-14571144 FN1086-S Single Base Substitution A-C INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN731-S.SNP.8:14572099 chr08:014572099 0 W/14572099-14572099 FN731-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g24130 retrotransposon protein, putative, unclassified, expressed SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN1158-S.SNP.8:14574924 chr08:014574924 0 W/14574924-14574924 FN1158-S Single Base Substitution T-A INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN_N1-150-1.SNP.8:14576806 chr08:014576806 0 W/14576806-14576806 FN_N1-150-1 Single Base Substitution G-A HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN805-S.SNP.8:14580195 chr08:014580195 0 W/14580195-14580195 FN805-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1712-S.SNP.8:14581206 chr08:014581206 0 W/14581206-14581206 FN1712-S SNP C -> T AC=1;AN=188;BQB=0.656555;DP=1881;DP4=729,1060,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87382e-06;MQSB=0.958245;RPB=0.643943;SGB=-15.5431;VDB=0.600856;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L223|592|LOC_Os08g24140|protein_coding|CODING|LOC_Os08g24140.1|1|1) FN1336-S.SNP.8:14589544 chr08:014589544 0 W/14589544-14589544 FN1336-S Single Base Substitution C-A INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2751-S.SNP.8:14597363 chr08:014597363 0 W/14597363-14597363 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.48445;DP=4973;DP4=2410,2366,5,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000138072;MQSB=0.010476;RPB=0.612503;SGB=43.8747;VDB=0.814147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.8:14614872 chr08:014614872 0 W/14614872-14614872 FN3312-S SNP A -> G AC=1;AN=184;BQB=0.988021;DP=2345;DP4=214,2038,1,17;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.00035714;MQSB=4.46326e-22;RPB=0.516462;SGB=53.3568;VDB=0.123825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.8:14659846 chr08:014659846 0 W/14659846-14659846 FN2202-S SNP A -> G AC=1;AN=190;BQB=0.999781;DP=4460;DP4=2093,2087,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.00381166;MQB=1.9906e-08;MQSB=0.107833;RPB=0.895028;SGB=24.3115;VDB=0.611263;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V151|739|LOC_Os08g24290|protein_coding|CODING|LOC_Os08g24290.1|3|1) FN1435-S.SNP.8:14667156 chr08:014667156 0 W/14667156-14667156 FN1435-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN-252.SNP.8:14670926 chr08:014670926 0 W/14670926-14670926 FN-252 Single Base Substitution C-G INTERGENIC HOMO SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-291.SNP.8:14673600 chr08:014673600 0 W/14673600-14673600 FN-291 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. W42-1-3S-1.SNP.8:14680037 chr08:014680037 0 W/14680037-14680037 W42-1-3S-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN1097-S.SNP.8:14681090 chr08:014681090 0 W/14681090-14681090 FN1097-S Single Base Substitution G-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2093-S.SNP.8:14687970 chr08:014687970 0 W/14687970-14687970 FN2093-S SNP C -> A AC=1;AN=168;BQB=0.012156;DP=3266;DP4=1602,1623,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.177195;MQSB=0.548853;RPB=0.920087;SGB=-80.0779;VDB=0.436636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V219L|335|LOC_Os08g24330|protein_coding|CODING|LOC_Os08g24330.1|4|1) FN3364-S.SNP.8:14713025 chr08:014713025 0 W/14713025-14713025 FN3364-S SNP A -> G AC=1;AN=184;BQB=0.996853;DP=2762;DP4=1376,1287,3,14;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.93847e-08;MQSB=0.941305;RPB=0.225195;SGB=28.3187;VDB=0.123709;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.8:14713379 chr08:014713379 0 W/14713379-14713379 FN3751-S SNP A -> T AC=2;AN=190;BQB=0.990763;DP=2528;DP4=1187,1263,11,15;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.00276899;MQB=4.46143e-09;MQSB=8.95556e-11;RPB=0.512858;SGB=112.85;VDB=0.164418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.8:14714229 chr08:014714229 0 W/14714229-14714229 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.918457;DP=3850;DP4=1920,1739,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=0.00179449;MQSB=1.49261e-12;RPB=0.649482;SGB=43.7442;VDB=0.735833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.8:14728141 chr08:014728141 0 W/14728141-14728141 FN1506-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g24390 expressed protein SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN776-S.SNP.8:14735767 chr08:014735767 0 W/14735767-14735767 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN3985-S.SNP.8:14743238 chr08:014743238 0 W/14743238-14743238 FN3985-S SNP G -> A AC=1;AN=168;BQB=0.780743;DP=3033;DP4=1213,1679,11,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.53428e-16;MQSB=0.962417;RPB=0.992728;SGB=56.2162;VDB=0.443309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.8:14743690 chr08:014743690 0 W/14743690-14743690 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.0224809;DP=2656;DP4=1268,1305,19,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.001105;MQSB=0.999857;RPB=0.722589;SGB=-240.186;VDB=0.468814;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.8:14760282 chr08:014760282 0 W/14760282-14760282 FN888-S Single Base Substitution A-G INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN888-S.SNP.8:14760286 chr08:014760286 0 W/14760286-14760286 FN888-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3577-S.SNP.8:14797742 chr08:014797742 0 W/14797742-14797742 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.999098;DP=2144;DP4=574,1538,2,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.000100287;MQSB=0.179459;RPB=0.906534;SGB=48.979;VDB=0.964348;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L129|590|LOC_Os08g24500|protein_coding|CODING|LOC_Os08g24500.1|1|1) FN956-S.SNP.8:14879252 chr08:014879252 0 W/14879252-14879252 FN956-S Single Base Substitution T-A INTRON HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1011-S.SNP.8:14882864 chr08:014882864 0 W/14882864-14882864 FN1011-S Single Base Substitution C-G INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN2597-S.SNP.8:14892455 chr08:014892455 0 W/14892455-14892455 FN2597-S SNP G -> T AC=1;AN=198;BQB=0.506007;DP=4146;DP4=1956,1870,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00964785;MQB=0.00038262;MQSB=0.00624566;RPB=0.932505;SGB=81.7147;VDB=0.766815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.8:14906578 chr08:014906578 0 W/14906578-14906578 FN3773-S SNP G -> A AC=1;AN=190;BQB=0.87632;DP=2397;DP4=1247,1067,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0100125;MQB=0.000860154;MQSB=0.00312296;RPB=0.659442;SGB=43.2083;VDB=0.61371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.8:14906686 chr08:014906686 0 W/14906686-14906686 FN1452-S Single Base Substitution G-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2175-S.SNP.8:14910857 chr08:014910857 0 W/14910857-14910857 FN2175-S SNP G -> A AC=1;AN=168;BQB=0.892282;DP=823;DP4=302,499,1,7;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=0.147167;MQSB=0.98647;RPB=0.752477;SGB=17.5943;VDB=6.71664e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.8:14911077 chr08:014911077 0 W/14911077-14911077 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.919055;DP=3817;DP4=2124,1422,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.00261986;MQB=0.000725965;MQSB=0.00129933;RPB=0.824715;SGB=85.5263;VDB=0.438189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.8:14925849 chr08:014925849 0 W/14925849-14925849 FN2149-S SNP A -> C AC=1;AN=168;BQB=0.967935;DP=3420;DP4=1668,1710,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=0.000379867;MQSB=0.0718876;RPB=0.624094;SGB=41.6096;VDB=0.245015;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.8:14930418 chr08:014930418 0 W/14930418-14930418 FN875-S Single Base Substitution C-A INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN772-S.SNP.8:14948517 chr08:014948517 0 W/14948517-14948517 FN772-S Single Base Substitution C-T INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN_831-4-1.SNP.8:14949101 chr08:014949101 0 W/14949101-14949101 FN_831-4-1 Single Base Substitution C-A HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN3803-S.SNP.8:14961615 chr08:014961615 0 W/14961615-14961615 FN3803-S SNP T -> C AC=1;AN=190;BQB=0.956128;DP=2389;DP4=1089,1160,14,10;HOB=5.54017e-05;ICB=0.000111386;MQ=14;MQ0F=0.429887;MQB=0.529783;MQSB=6.1388e-20;RPB=0.716315;SGB=75.1932;VDB=0.22239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K492E|1778|LOC_Os08g24730|protein_coding|CODING|LOC_Os08g24730.1|1|1) FN1043-S.SNP.8:14966672 chr08:014966672 0 W/14966672-14966672 FN1043-S Single Base Substitution T-C INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1409-S.SNP.8:14974549 chr08:014974549 0 W/14974549-14974549 FN1409-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2214-S.SNP.8:14974549 chr08:014974549 0 W/14974549-14974549 FN2214-S SNP G -> A AC=1;AN=190;BQB=0.809073;DP=4134;DP4=2019,1785,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=2.02288e-07;MQSB=0.328221;RPB=0.674876;SGB=33.8752;VDB=0.347268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.8:14974549 chr08:014974549 0 W/14974549-14974549 FN2474 SNP G -> A AC=1;AN=200;BQB=0.995335;DP=3955;DP4=1955,1711,8,12;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=1.0677e-09;MQSB=0.0391527;RPB=0.260409;SGB=61.9006;VDB=0.0662521;EFF=INTERGENIC(MODIFIER||||||||||1) FN-101.SNP.8:14975239 chr08:014975239 0 W/14975239-14975239 FN-101 Single Base Substitution C-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN559-S.SNP.8:14983215 chr08:014983215 0 W/14983215-14983215 FN559-S Single Base Substitution T-G INTRON HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN3902-S.SNP.8:14990062 chr08:014990062 0 W/14990062-14990062 FN3902-S SNP T -> A AC=2;AN=158;BQB=0.832752;DP=2298;DP4=1048,1114,15,19;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=1.80934e-17;MQSB=0.19715;RPB=0.887063;SGB=104.832;VDB=0.113167;EFF=INTRON(MODIFIER||||1051|LOC_Os08g24760|protein_coding|CODING|LOC_Os08g24760.1|5|1) FN2191-S.SNP.8:15001720 chr08:015001720 0 W/15001720-15001720 FN2191-S SNP G -> T AC=2;AN=190;BQB=0.491126;DP=5244;DP4=2297,2517,26,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=3.85741e-14;MQSB=0.720196;RPB=0.854612;SGB=199.373;VDB=0.97103;EFF=INTRON(MODIFIER||||716|LOC_Os08g24770|protein_coding|CODING|LOC_Os08g24770.1|2|1) FN2436.SNP.8:15004047 chr08:015004047 0 W/15004047-15004047 FN2436 SNP A -> T AC=2;AN=200;BQB=0.884113;DP=4746;DP4=2236,2251,26,33;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0;MQB=0.000538542;MQSB=0.00657511;RPB=0.227421;SGB=202.502;VDB=0.804465;EFF=INTRON(MODIFIER||||716|LOC_Os08g24770|protein_coding|CODING|LOC_Os08g24770.1|2|1) FN1525-S.SNP.8:15009628 chr08:015009628 0 W/15009628-15009628 FN1525-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1231-S.SNP.8:15063981 chr08:015063981 0 W/15063981-15063981 FN1231-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g24880 EDM2, putative, expressed SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN880-S.SNP.8:15068862 chr08:015068862 0 W/15068862-15068862 FN880-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN4032-S.SNP.8:15074804 chr08:015074804 0 W/15074804-15074804 FN4032-S SNP G -> A AC=2;AN=168;BQB=0.974158;DP=2819;DP4=1244,1418,22,29;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.51573e-13;MQSB=0.880384;RPB=0.978271;SGB=185.22;VDB=0.145334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.8:15078319 chr08:015078319 0 W/15078319-15078319 FN4105-S SNP T -> C AC=1;AN=182;BQB=0.962944;DP=2779;DP4=1360,1363,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.40286e-05;MQSB=0.99453;RPB=0.93094;SGB=30.5793;VDB=0.947685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.8:15084023 chr08:015084023 0 W/15084023-15084023 FN3762-S SNP T -> C AC=2;AN=190;BQB=0.990457;DP=2567;DP4=1283,1210,8,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.5912e-10;MQSB=0.889249;RPB=0.976679;SGB=67.3108;VDB=0.239887;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.8:15084559 chr08:015084559 0 W/15084559-15084559 FN751-S Single Base Substitution A-T INTERGENIC HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2451.SNP.8:15086940 chr08:015086940 0 W/15086940-15086940 FN2451 SNP T -> A AC=2;AN=200;BQB=0.954676;DP=5422;DP4=2790,2348,32,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.98403e-37;MQSB=0.892666;RPB=0.451658;SGB=275.313;VDB=0.825972;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.8:15095844 chr08:015095844 0 W/15095844-15095844 FN4049-S SNP C -> T AC=1;AN=168;BQB=0.964096;DP=2374;DP4=1070,1197,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.28764e-07;MQSB=0.999408;RPB=0.940236;SGB=43.3113;VDB=0.978893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.8:15105897 chr08:015105897 0 W/15105897-15105897 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.867803;DP=4577;DP4=2076,2181,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.65608e-05;MQSB=0.761105;RPB=0.546613;SGB=29.4541;VDB=0.451699;EFF=INTRON(MODIFIER||||600|LOC_Os08g24930|protein_coding|CODING|LOC_Os08g24930.1|1|1) FN2297.SNP.8:15109905 chr08:015109905 0 W/15109905-15109905 FN2297 SNP C -> A AC=1;AN=192;BQB=0.330013;DP=4782;DP4=2189,2258,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.39024e-06;MQSB=0.00151522;RPB=0.43822;SGB=53.7748;VDB=0.361518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.8:15130611 chr08:015130611 0 W/15130611-15130611 FN1499-S Single Base Substitution A-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3425-S.SNP.8:15130623 chr08:015130623 0 W/15130623-15130623 FN3425-S SNP G -> A AC=2;AN=184;BQB=0.997161;DP=2596;DP4=1337,1164,10,6;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=6.59643e-07;MQSB=0.098358;RPB=0.9747;SGB=46.3132;VDB=0.187308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.8:15147450 chr08:015147450 0 W/15147450-15147450 FN3386-S SNP G -> A AC=1;AN=184;BQB=0.433488;DP=2964;DP4=1430,1451,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00101215;MQB=3.5017e-08;MQSB=0.222286;RPB=0.309209;SGB=66.8296;VDB=0.961547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P800L|1248|LOC_Os08g24980|protein_coding|CODING|LOC_Os08g24980.1|6|1) FN2231-S.SNP.8:15153338 chr08:015153338 0 W/15153338-15153338 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.891047;DP=4398;DP4=2210,1891,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000287204;MQSB=0.745854;RPB=0.934971;SGB=8.33661;VDB=0.823388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.8:15166179 chr08:015166179 0 W/15166179-15166179 FN3412-S SNP G -> C AC=1;AN=184;BQB=0.999999;DP=2607;DP4=1124,1385,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.05781e-07;MQSB=0.910042;RPB=0.564033;SGB=39.699;VDB=0.964429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Gcc|P31A|419|LOC_Os08g25010|protein_coding|CODING|LOC_Os08g25010.1|2|1) FN3751-S.SNP.8:15170065 chr08:015170065 0 W/15170065-15170065 FN3751-S SNP G -> A AC=1;AN=190;BQB=0.181003;DP=2239;DP4=1196,952,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.17696e-06;MQSB=0.107641;RPB=0.775525;SGB=13.4442;VDB=0.145612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.8:15173753 chr08:015173753 0 W/15173753-15173753 FN2780-S SNP G -> A AC=1;AN=196;BQB=0.261157;DP=3621;DP4=1757,1652,8,9;HOB=5.20616e-05;ICB=0.000104654;MQ=48;MQ0F=0.000552334;MQB=2.68396e-07;MQSB=0.690803;RPB=0.89944;SGB=72.5245;VDB=0.600175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.8:15185447 chr08:015185447 0 W/15185447-15185447 FN1024-S Single Base Substitution C-T INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3698-S.SNP.8:15189685 chr08:015189685 0 W/15189685-15189685 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.796448;DP=2372;DP4=1310,980,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0193929;MQB=0.306251;MQSB=0.00448175;RPB=0.0528571;SGB=53.6492;VDB=0.188744;EFF=INTRON(MODIFIER||||227|LOC_Os08g25020|protein_coding|CODING|LOC_Os08g25020.1|2|1) FN-344.SNP.8:15190039 chr08:015190039 0 W/15190039-15190039 FN-344 Single Base Substitution A-G INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN1661-S.SNP.8:15191081 chr08:015191081 0 W/15191081-15191081 FN1661-S Single Base Substitution C-A INTRON Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN730-S.SNP.8:15194880 chr08:015194880 0 W/15194880-15194880 FN730-S Single Base Substitution G-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN1725-S.SNP.8:15200926 chr08:015200926 0 W/15200926-15200926 FN1725-S SNP G -> A AC=2;AN=188;BQB=0.542022;DP=3532;DP4=1354,2128,11,31;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=1.75381e-08;MQSB=0.00429716;RPB=0.570605;SGB=-0.874095;VDB=0.0077969;EFF=INTRON(MODIFIER||||172|LOC_Os08g25050|protein_coding|CODING|LOC_Os08g25050.1|2|1) FN1400-S.SNP.8:15214874 chr08:015214874 0 W/15214874-15214874 FN1400-S Single Base Substitution C-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2191-S.SNP.8:15214874 chr08:015214874 0 W/15214874-15214874 FN2191-S SNP C -> T AC=2;AN=190;BQB=0.251356;DP=5121;DP4=2357,2292,24,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.42725e-08;MQSB=0.059439;RPB=0.767088;SGB=-132.79;VDB=0.177893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.8:15214874 chr08:015214874 0 W/15214874-15214874 FN3562-S SNP C -> T AC=2;AN=188;BQB=0.96374;DP=2852;DP4=1342,1408,9,8;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=0.000332775;MQSB=0.638821;RPB=0.892;SGB=71.6954;VDB=0.362378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.8:15214874 chr08:015214874 0 W/15214874-15214874 FN3652-S SNP C -> T AC=2;AN=190;BQB=0.988382;DP=2858;DP4=1310,1391,6,13;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0;MQB=0.00141972;MQSB=0.348963;RPB=0.721115;SGB=80.9724;VDB=0.142194;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.8:15218467 chr08:015218467 0 W/15218467-15218467 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.99582;DP=2957;DP4=1200,1701,6,10;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=7.50783e-07;MQSB=0.916392;RPB=0.270466;SGB=46.1603;VDB=0.444161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.8:15221859 chr08:015221859 0 W/15221859-15221859 FN1525-S Single Base Substitution G-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1261-S.SNP.8:15234595 chr08:015234595 0 W/15234595-15234595 FN1261-S Single Base Substitution G-T INTRON HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2088-S.SNP.8:15236360 chr08:015236360 0 W/15236360-15236360 FN2088-S SNP A -> T AC=1;AN=168;BQB=0.764848;DP=3285;DP4=2011,1220,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000304414;MQB=8.94963e-05;MQSB=0.781817;RPB=0.647674;SGB=24.6155;VDB=0.700371;EFF=UTR_5_PRIME(MODIFIER||110||335|LOC_Os08g25090|protein_coding|CODING|LOC_Os08g25090.1|1|1),UTR_5_PRIME(MODIFIER||110||311|LOC_Os08g25090|protein_coding|CODING|LOC_Os08g25090.2|1|1) FN3817-S.SNP.8:15238358 chr08:015238358 0 W/15238358-15238358 FN3817-S SNP C -> T AC=2;AN=190;BQB=0.941102;DP=2637;DP4=1056,1480,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.79092e-12;MQSB=0.948321;RPB=0.983982;SGB=64.5316;VDB=0.371711;EFF=INTRON(MODIFIER||||74|LOC_Os08g25100|protein_coding|CODING|LOC_Os08g25100.1|1|1) FN75-S-43.SNP.8:15240729 chr08:015240729 0 W/15240729-15240729 FN75-S-43 SNP T -> C AC=1;AN=190;BQB=0.943952;DP=4776;DP4=2214,2357,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020938;MQB=9.43983e-12;MQSB=0.944606;RPB=0.24679;SGB=44.0907;VDB=0.9963;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.8:15258416 chr08:015258416 0 W/15258416-15258416 FN502-S Single Base Substitution A-T INTRON HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN-227.SNP.8:15262112 chr08:015262112 0 W/15262112-15262112 FN-227 Single Base Substitution T-C INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2621-S.SNP.8:15267142 chr08:015267142 0 W/15267142-15267142 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.715855;DP=4438;DP4=2089,2091,10,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1853e-17;MQSB=0.995991;RPB=0.301741;SGB=97.9523;VDB=0.281461;EFF=UTR_5_PRIME(MODIFIER||1782||282|LOC_Os08g25130|protein_coding|CODING|LOC_Os08g25130.2|1|1),UTR_5_PRIME(MODIFIER||47||453|LOC_Os08g25130|protein_coding|CODING|LOC_Os08g25130.1|1|1) FN1018-S.SNP.8:15269822 chr08:015269822 0 W/15269822-15269822 FN1018-S Single Base Substitution T-C INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1434-S.SNP.8:15269896 chr08:015269896 0 W/15269896-15269896 FN1434-S Single Base Substitution G-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN-153.SNP.8:15276187 chr08:015276187 0 W/15276187-15276187 FN-153 Single Base Substitution T-C INTRON HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN2380.SNP.8:15277633 chr08:015277633 0 W/15277633-15277633 FN2380 SNP A -> C AC=2;AN=192;BQB=0.40491;DP=4865;DP4=2236,2361,19,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.10708e-24;MQSB=0.999839;RPB=0.592824;SGB=49.5922;VDB=0.284756;EFF=UTR_3_PRIME(MODIFIER||63||316|LOC_Os08g25140|protein_coding|CODING|LOC_Os08g25140.1|8|1) FN-153.SNP.8:15284312 chr08:015284312 0 W/15284312-15284312 FN-153 Single Base Substitution G-A INTERGENIC HOMO SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN687-S.SNP.8:15285922 chr08:015285922 0 W/15285922-15285922 FN687-S Single Base Substitution G-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN819-S.SNP.8:15289596 chr08:015289596 0 W/15289596-15289596 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2109-S.SNP.8:15293860 chr08:015293860 0 W/15293860-15293860 FN2109-S SNP C -> A AC=1;AN=168;BQB=0.0102364;DP=3977;DP4=1937,2000,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00159792;MQSB=0.999995;RPB=0.941624;SGB=-101.503;VDB=0.111072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.8:15298573 chr08:015298573 0 W/15298573-15298573 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.101816;DP=4673;DP4=2293,2120,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00342392;MQB=1.56834e-11;MQSB=0.526599;RPB=0.943539;SGB=79.9264;VDB=0.404627;EFF=INTRON(MODIFIER||||242|LOC_Os08g25180|protein_coding|CODING|LOC_Os08g25180.1|1|1) FN2146-S.SNP.8:15303737 chr08:015303737 0 W/15303737-15303737 FN2146-S SNP T -> C AC=2;AN=168;BQB=0.998926;DP=3579;DP4=1470,2048,21,19;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.015088;MQB=1.47799e-06;MQSB=0.997426;RPB=0.904845;SGB=38.5303;VDB=0.00255834;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H112|1299|LOC_Os08g25190|protein_coding|CODING|LOC_Os08g25190.1|3|1) FN543-S.SNP.8:15305729 chr08:015305729 0 W/15305729-15305729 FN543-S Single Base Substitution A-G INTRON HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1556-S.SNP.8:15307845 chr08:015307845 0 W/15307845-15307845 FN1556-S Single Base Substitution G-A INTRON Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2106-S.SNP.8:15307845 chr08:015307845 0 W/15307845-15307845 FN2106-S SNP G -> A AC=1;AN=168;BQB=0.993077;DP=3414;DP4=1674,1682,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000292912;MQB=8.30976e-09;MQSB=0.92808;RPB=0.952324;SGB=15.6372;VDB=0.470689;EFF=INTRON(MODIFIER||||1299|LOC_Os08g25190|protein_coding|CODING|LOC_Os08g25190.1|7|1) FN505-S.SNP.8:15307845 chr08:015307845 0 W/15307845-15307845 FN505-S Single Base Substitution G-A INTRON HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1586-S.SNP.8:15315065 chr08:015315065 0 W/15315065-15315065 FN1586-S Single Base Substitution G-A INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN-246.SNP.8:15318632 chr08:015318632 0 W/15318632-15318632 FN-246 Single Base Substitution C-T INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN4253-S.SNP.8:15320717 chr08:015320717 0 W/15320717-15320717 FN4253-S SNP C -> A AC=1;AN=170;BQB=0.92888;DP=2265;DP4=1072,1152,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.46832e-06;MQSB=0.999999;RPB=0.477683;SGB=7.6708;VDB=0.268796;EFF=INTERGENIC(MODIFIER||||||||||1) FN-12.SNP.8:15322495 chr08:015322495 0 W/15322495-15322495 FN-12 Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os08g25220 retrotransposon protein, putative, unclassified, expressed SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN1131-S.SNP.8:15324796 chr08:015324796 0 W/15324796-15324796 FN1131-S Single Base Substitution G-A INTRON HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN2688-S.SNP.8:15326567 chr08:015326567 0 W/15326567-15326567 FN2688-S SNP T -> A AC=1;AN=200;BQB=0.935621;DP=10487;DP4=5125,4980,15,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0145895;MQB=1.49063e-08;MQSB=0;RPB=0.820615;SGB=-5.24302;VDB=0.693602;EFF=INTRON(MODIFIER||||772|LOC_Os08g25220|protein_coding|CODING|LOC_Os08g25220.1|6|1) FN-108.SNP.8:15331014 chr08:015331014 0 W/15331014-15331014 FN-108 Single Base Substitution C-T INTRON HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN3511-S.SNP.8:15331429 chr08:015331429 0 W/15331429-15331429 FN3511-S SNP C -> T AC=2;AN=188;BQB=0.76936;DP=3819;DP4=1568,2089,13,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.89021e-13;MQSB=0.926823;RPB=0.960392;SGB=85.5904;VDB=0.833384;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P5|209|LOC_Os08g25230|protein_coding|CODING|LOC_Os08g25230.1|1|1) FN2242-S.SNP.8:15337413 chr08:015337413 0 W/15337413-15337413 FN2242-S SNP G -> T AC=1;AN=190;BQB=0.466061;DP=5335;DP4=2381,2654,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000749766;MQB=7.20316e-06;MQSB=0.981996;RPB=0.980722;SGB=23.6597;VDB=0.0680605;EFF=INTRON(MODIFIER||||588|LOC_Os08g25250|protein_coding|CODING|LOC_Os08g25250.1|8|1) FN1278-S.SNP.8:15340786 chr08:015340786 0 W/15340786-15340786 FN1278-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2202-S.SNP.8:15341343 chr08:015341343 0 W/15341343-15341343 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.933836;DP=5372;DP4=2477,2617,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8306e-08;MQSB=0.932849;RPB=0.635899;SGB=18.552;VDB=0.176584;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.8:15344963 chr08:015344963 0 W/15344963-15344963 FN-226 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g25260 transposon protein, putative, unclassified, expressed SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-380.SNP.8:15349458 chr08:015349458 0 W/15349458-15349458 FN-380 Single Base Substitution G-A INTERGENIC HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3955-S.SNP.8:15349949 chr08:015349949 0 W/15349949-15349949 FN3955-S SNP A -> G AC=1;AN=168;BQB=0.772593;DP=2512;DP4=1089,1222,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.03578e-12;MQSB=0.98298;RPB=0.918449;SGB=11.3448;VDB=0.396993;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.8:15350266 chr08:015350266 0 W/15350266-15350266 FN-95 Single Base Substitution G-T INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2361.SNP.8:15356585 chr08:015356585 0 W/15356585-15356585 FN2361 SNP G -> A AC=1;AN=192;BQB=0.999367;DP=4621;DP4=2148,2235,8,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.52779e-17;MQSB=0.929195;RPB=0.341814;SGB=89.6809;VDB=0.77107;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L733|819|LOC_Os08g25280|protein_coding|CODING|LOC_Os08g25280.1|1|1) FN2361.SNP.8:15356586 chr08:015356586 0 W/15356586-15356586 FN2361 SNP T -> A AC=1;AN=192;BQB=0.991465;DP=4607;DP4=2102,2177,9,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.07176e-16;MQSB=0.843256;RPB=0.545965;SGB=93.2452;VDB=0.827996;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S734T|819|LOC_Os08g25280|protein_coding|CODING|LOC_Os08g25280.1|1|1) FN3718-S.SNP.8:15358812 chr08:015358812 0 W/15358812-15358812 FN3718-S SNP G -> A AC=1;AN=190;BQB=0.951268;DP=2856;DP4=1348,1372,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29001e-07;MQSB=0.692674;RPB=0.491555;SGB=44.5415;VDB=0.423273;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.8:15373410 chr08:015373410 0 W/15373410-15373410 FN484-S Single Base Substitution G-A INTERGENIC HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3519-S.SNP.8:15384306 chr08:015384306 0 W/15384306-15384306 FN3519-S SNP T -> C AC=1;AN=188;BQB=0.99128;DP=2921;DP4=1277,1566,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.86978e-08;MQSB=0.942086;RPB=0.99689;SGB=58.0655;VDB=0.23502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.8:15390867 chr08:015390867 0 W/15390867-15390867 FN1670-S SNP G -> A AC=2;AN=188;BQB=0.496628;DP=1697;DP4=1051,611,11,3;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.23661e-05;MQSB=0.961569;RPB=0.987674;SGB=39.5276;VDB=0.94314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.8:15403294 chr08:015403294 0 W/15403294-15403294 FN1434-S Single Base Substitution C-T INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. W466-5-1.SNP.8:15417680 chr08:015417680 0 W/15417680-15417680 W466-5-1 Single Base Substitution A-G INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-168.SNP.8:15421049 chr08:015421049 0 W/15421049-15421049 FN-168 Single Base Substitution C-T INTRON HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2123-S.SNP.8:15422427 chr08:015422427 0 W/15422427-15422427 FN2123-S SNP A -> G AC=1;AN=168;BQB=0.380676;DP=3360;DP4=2098,1230,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.81347e-07;MQSB=0.865226;RPB=0.302224;SGB=4.1907;VDB=0.429885;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.8:15423326 chr08:015423326 0 W/15423326-15423326 FN323-S Single Base Substitution G-A INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN886-S.SNP.8:15423636 chr08:015423636 0 W/15423636-15423636 FN886-S Single Base Substitution A-G INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN883-S.SNP.8:15429262 chr08:015429262 0 W/15429262-15429262 FN883-S Single Base Substitution A-T INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN883-S.SNP.8:15429263 chr08:015429263 0 W/15429263-15429263 FN883-S Single Base Substitution C-T INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2112-S.SNP.8:15436737 chr08:015436737 0 W/15436737-15436737 FN2112-S SNP G -> A AC=1;AN=168;BQB=0.0301816;DP=4292;DP4=2108,2147,14,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0384e-08;MQSB=0.945529;RPB=0.998438;SGB=-216.752;VDB=0.344438;EFF=INTERGENIC(MODIFIER||||||||||1) FN4302-S.SNP.8:15458578 chr08:015458578 0 W/15458578-15458578 FN4302-S SNP C -> T AC=2;AN=170;BQB=0.917326;DP=2397;DP4=1314,944,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.54382e-15;MQSB=0.871288;RPB=0.838124;SGB=79.6325;VDB=0.705348;EFF=INTRON(MODIFIER||||256|LOC_Os08g25410|protein_coding|CODING|LOC_Os08g25410.1|4|1) FN2657-S.SNP.8:15471670 chr08:015471670 0 W/15471670-15471670 FN2657-S SNP C -> G AC=1;AN=200;BQB=0.90207;DP=5218;DP4=2457,2401,22,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.30479e-19;MQSB=0.500267;RPB=0.925789;SGB=39.9882;VDB=0.215747;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.8:15473392 chr08:015473392 0 W/15473392-15473392 FN909-S Single Base Substitution C-T INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2668-S.SNP.8:15481145 chr08:015481145 0 W/15481145-15481145 FN2668-S SNP T -> C AC=1;AN=200;BQB=0.985412;DP=4827;DP4=2462,2151,19,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15645e-17;MQSB=0.918253;RPB=0.801993;SGB=30.3571;VDB=0.52139;EFF=INTRON(MODIFIER||||591|LOC_Os08g25430|protein_coding|CODING|LOC_Os08g25430.1|5|1),INTRON(MODIFIER||||484|LOC_Os08g25430|protein_coding|CODING|LOC_Os08g25430.2|5|1) FN2167-S.SNP.8:15483555 chr08:015483555 0 W/15483555-15483555 FN2167-S SNP A -> C AC=1;AN=168;BQB=0.0903617;DP=3948;DP4=1918,1993,6,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.25575e-07;MQSB=0.825565;RPB=0.703473;SGB=-13.6493;VDB=0.0666076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-30.SNP.8:15486591 chr08:015486591 0 W/15486591-15486591 FN-30 Single Base Substitution C-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN-30.SNP.8:15486593 chr08:015486593 0 W/15486593-15486593 FN-30 Single Base Substitution A-T INTERGENIC Homo SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN920-S.SNP.8:15488814 chr08:015488814 0 W/15488814-15488814 FN920-S Single Base Substitution T-G INTERGENIC HOMO SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3825-S.SNP.8:15489737 chr08:015489737 0 W/15489737-15489737 FN3825-S SNP G -> C AC=2;AN=190;BQB=0.617699;DP=2657;DP4=947,1408,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.87146e-09;MQSB=0.0211858;RPB=0.572588;SGB=54.3062;VDB=0.390399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.8:15489747 chr08:015489747 0 W/15489747-15489747 FN3670-S SNP C -> T AC=1;AN=190;BQB=0.90538;DP=2511;DP4=830,1435,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.34242e-07;MQSB=0.0230033;RPB=0.790827;SGB=5.66499;VDB=0.795798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.8:15492740 chr08:015492740 0 W/15492740-15492740 FN3460-S SNP A -> G AC=1;AN=184;BQB=0.463793;DP=2728;DP4=1240,1382,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.22702e-06;MQSB=0.969889;RPB=0.113586;SGB=13.188;VDB=0.603911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.8:15493144 chr08:015493144 0 W/15493144-15493144 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.86407;DP=3925;DP4=1955,1685,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.02436e-11;MQSB=0.939383;RPB=0.0793096;SGB=113.881;VDB=0.434438;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.8:15495277 chr08:015495277 0 W/15495277-15495277 FN-182 Single Base Substitution C-A INTRON HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2547-S.SNP.8:15500489 chr08:015500489 0 W/15500489-15500489 FN2547-S SNP G -> T AC=2;AN=198;BQB=0.700536;DP=4213;DP4=2041,1959,7,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.07738e-07;MQSB=0.984845;RPB=0.582175;SGB=40.149;VDB=0.595914;EFF=INTRON(MODIFIER||||462|LOC_Os08g25460|protein_coding|CODING|LOC_Os08g25460.1|9|1) FN2146-S.SNP.8:15504348 chr08:015504348 0 W/15504348-15504348 FN2146-S SNP C -> G AC=1;AN=168;BQB=0.995148;DP=2487;DP4=1186,1246,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.43899e-07;MQSB=0.0584531;RPB=0.696979;SGB=-17.9574;VDB=0.856747;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.8:15506994 chr08:015506994 0 W/15506994-15506994 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.885856;DP=2431;DP4=1145,1184,2,18;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.65684e-11;MQSB=0.970833;RPB=0.996675;SGB=10.1031;VDB=0.78622;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.8:15509767 chr08:015509767 0 W/15509767-15509767 CW-631-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2492.SNP.8:15510727 chr08:015510727 0 W/15510727-15510727 FN2492 SNP C -> T AC=1;AN=200;BQB=0.786899;DP=3772;DP4=1613,1872,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.77072e-07;MQSB=0.171057;RPB=0.949638;SGB=45.0543;VDB=0.76439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G418D|517|LOC_Os08g25490|protein_coding|CODING|LOC_Os08g25490.1|2|1) FN3492-S.SNP.8:15512249 chr08:015512249 0 W/15512249-15512249 FN3492-S SNP A -> G AC=2;AN=184;BQB=0.929024;DP=3272;DP4=1666,1457,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.89564e-13;MQSB=0.658604;RPB=0.923174;SGB=74.4875;VDB=0.0523907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.8:15512871 chr08:015512871 0 W/15512871-15512871 FN2334 SNP C -> T AC=1;AN=192;BQB=0.701231;DP=5425;DP4=2292,2395,20,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.44171e-10;MQSB=0.000117853;RPB=0.286384;SGB=-127.926;VDB=0.805087;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.8:15515935 chr08:015515935 0 W/15515935-15515935 FN555-S Single Base Substitution G-A INTERGENIC HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN4032-S.SNP.8:15516413 chr08:015516413 0 W/15516413-15516413 FN4032-S SNP A -> T AC=2;AN=168;BQB=0.739466;DP=2585;DP4=1251,1214,19,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.60861e-18;MQSB=0.63714;RPB=0.731492;SGB=113.657;VDB=0.73165;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.8:15523497 chr08:015523497 0 W/15523497-15523497 FN-281 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1723-S.SNP.8:15523497 chr08:015523497 0 W/15523497-15523497 FN1723-S SNP G -> A AC=2;AN=188;BQB=0.08362;DP=1297;DP4=586,548,6,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.0111505;MQSB=0.82917;RPB=0.511951;SGB=-2.17824;VDB=0.705435;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P296|430|LOC_Os08g25510|protein_coding|CODING|LOC_Os08g25510.1|3|1) FN1062-S.SNP.8:15534491 chr08:015534491 0 W/15534491-15534491 FN1062-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g25540 retrotransposon protein, putative, unclassified, expressed SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN4176-S.SNP.8:15536354 chr08:015536354 0 W/15536354-15536354 FN4176-S SNP A -> G AC=1;AN=170;BQB=0.96031;DP=2479;DP4=1077,1328,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00322711;MQB=0.00169054;MQSB=0.401591;RPB=0.999293;SGB=7.67082;VDB=0.133454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.8:15537464 chr08:015537464 0 W/15537464-15537464 FN2560-S SNP C -> A AC=1;AN=198;BQB=0.984884;DP=4119;DP4=1568,2071,23,7;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0536538;MQB=0.000238;MQSB=0.92959;RPB=0.906901;SGB=-75.2793;VDB=0.0551758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.8:15539072 chr08:015539072 0 W/15539072-15539072 FN1224-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3697-S.SNP.8:15544479 chr08:015544479 0 W/15544479-15544479 FN3697-S SNP G -> A AC=1;AN=190;BQB=0.605718;DP=2758;DP4=1026,1586,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0659898;MQB=0.990332;MQSB=4.38301e-20;RPB=0.505638;SGB=32.5467;VDB=0.898787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.8:15545097 chr08:015545097 0 W/15545097-15545097 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.949498;DP=3671;DP4=1637,1856,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000817216;MQB=1.7144e-09;MQSB=0.681101;RPB=0.863392;SGB=103.004;VDB=0.641515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.8:15553662 chr08:015553662 0 W/15553662-15553662 FN1529-S Single Base Substitution A-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2309.SNP.8:15553746 chr08:015553746 0 W/15553746-15553746 FN2309 SNP C -> T AC=1;AN=192;BQB=0.0763011;DP=4909;DP4=2340,2230,23,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.94498e-15;MQSB=0.815048;RPB=0.264659;SGB=-184.099;VDB=0.00387641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.8:15556838 chr08:015556838 0 W/15556838-15556838 FN3306-S SNP G -> A AC=1;AN=184;BQB=0.968348;DP=2865;DP4=1406,1379,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.15599e-08;MQSB=0.995628;RPB=0.2382;SGB=32.2261;VDB=0.66732;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C209Y|458|LOC_Os08g25570|protein_coding|CODING|LOC_Os08g25570.1|2|1) FN1433-S.SNP.8:15560136 chr08:015560136 0 W/15560136-15560136 FN1433-S Single Base Substitution T-C INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1400-S.SNP.8:15560782 chr08:015560782 0 W/15560782-15560782 FN1400-S Single Base Substitution A-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1400-S.SNP.8:15560784 chr08:015560784 0 W/15560784-15560784 FN1400-S Single Base Substitution G-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1557-S.SNP.8:15568883 chr08:015568883 0 W/15568883-15568883 FN1557-S Single Base Substitution C-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3934-S.SNP.8:15569403 chr08:015569403 0 W/15569403-15569403 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.407532;DP=2595;DP4=1177,1315,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.01661e-09;MQSB=0.985286;RPB=0.999657;SGB=26.1881;VDB=0.491596;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.8:15588880 chr08:015588880 0 W/15588880-15588880 FN-409 Single Base Substitution C-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1085-S.SNP.8:15589488 chr08:015589488 0 W/15589488-15589488 FN1085-S Single Base Substitution G-A INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN_N2-29a-1.SNP.8:15591289 chr08:015591289 0 W/15591289-15591289 FN_N2-29a-1 Single Base Substitution T-A HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN2373.SNP.8:15592727 chr08:015592727 0 W/15592727-15592727 FN2373 SNP G -> A AC=1;AN=192;BQB=0.511745;DP=4534;DP4=1878,2439,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.71003e-11;MQSB=0.804678;RPB=0.880449;SGB=41.7357;VDB=0.454998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G112R|407|LOC_Os08g25624|protein_coding|CODING|LOC_Os08g25624.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G112R|401|LOC_Os08g25624|protein_coding|CODING|LOC_Os08g25624.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G112R|342|LOC_Os08g25624|protein_coding|CODING|LOC_Os08g25624.3|1|1) FN2173-S.SNP.8:15599940 chr08:015599940 0 W/15599940-15599940 FN2173-S SNP A -> C AC=1;AN=168;BQB=0.0150052;DP=4094;DP4=2081,1961,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.86326e-08;MQSB=0.958122;RPB=0.485011;SGB=-110.908;VDB=0.396333;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.8:15608449 chr08:015608449 0 W/15608449-15608449 FN-227 Single Base Substitution C-T INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN-197.SNP.8:15617602 chr08:015617602 0 W/15617602-15617602 FN-197 Single Base Substitution G-A INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-370.SNP.8:15621077 chr08:015621077 0 W/15621077-15621077 FN-370 Single Base Substitution T-C INTRON HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.8:15621486 chr08:015621486 0 W/15621486-15621486 FN-370 Single Base Substitution C-T INTRON HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1655-S.SNP.8:15628480 chr08:015628480 0 W/15628480-15628480 FN1655-S Single Base Substitution C-T INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2484.SNP.8:15629338 chr08:015629338 0 W/15629338-15629338 FN2484 SNP C -> T AC=1;AN=200;BQB=0.596597;DP=4549;DP4=2321,1913,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21889e-05;MQSB=0.9942;RPB=0.927687;SGB=11.2488;VDB=0.382624;EFF=INTERGENIC(MODIFIER||||||||||1) FN-25.SNP.8:15629369 chr08:015629369 0 W/15629369-15629369 FN-25 Single Base Substitution T-A INTERGENIC Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN4144-S.SNP.8:15638939 chr08:015638939 0 W/15638939-15638939 FN4144-S SNP T -> C AC=2;AN=170;BQB=0.918868;DP=2563;DP4=1253,1231,10,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.67058e-13;MQSB=0.998507;RPB=0.134829;SGB=96.7413;VDB=0.632197;EFF=INTRON(MODIFIER||||357|LOC_Os08g25700|protein_coding|CODING|LOC_Os08g25700.1|1|1) FN1494-S.SNP.8:15640239 chr08:015640239 0 W/15640239-15640239 FN1494-S Single Base Substitution A-G INTRON HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1494-S.SNP.8:15640529 chr08:015640529 0 W/15640529-15640529 FN1494-S Single Base Substitution A-T INTRON HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3309-S.SNP.8:15642820 chr08:015642820 0 W/15642820-15642820 FN3309-S SNP C -> A AC=1;AN=184;BQB=0.991821;DP=3463;DP4=1412,1942,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.5076e-11;MQSB=0.97477;RPB=0.96659;SGB=28.3187;VDB=0.476401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V979L|1115|LOC_Os08g25710|protein_coding|CODING|LOC_Os08g25710.1|2|1) FN-307.SNP.8:15646481 chr08:015646481 0 W/15646481-15646481 FN-307 Single Base Substitution A-G INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1651-S.SNP.8:15652099 chr08:015652099 0 W/15652099-15652099 FN1651-S Single Base Substitution G-T INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2136-S.SNP.8:15667984 chr08:015667984 0 W/15667984-15667984 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.61276;DP=4330;DP4=2073,2198,15,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.74065e-16;MQSB=0.99911;RPB=0.78047;SGB=-45.7659;VDB=0.630205;EFF=INTRON(MODIFIER||||514|LOC_Os08g25734|protein_coding|CODING|LOC_Os08g25734.1|6|1),INTRON(MODIFIER||||479|LOC_Os08g25734|protein_coding|CODING|LOC_Os08g25734.2|6|1) FN1505-S.SNP.8:15679493 chr08:015679493 0 W/15679493-15679493 FN1505-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g25750 retrotransposon protein, putative, unclassified, expressed SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3546-S.SNP.8:15683239 chr08:015683239 0 W/15683239-15683239 FN3546-S SNP C -> T AC=2;AN=188;BQB=0.996222;DP=4053;DP4=2000,1935,22,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.9439e-16;MQSB=0.989825;RPB=0.971726;SGB=96.2203;VDB=0.196815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.8:15689149 chr08:015689149 0 W/15689149-15689149 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.889405;DP=3327;DP4=1222,1940,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.29547e-07;MQSB=0.653709;RPB=0.998786;SGB=44.2207;VDB=0.248694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.8:15691473 chr08:015691473 0 W/15691473-15691473 FN1236-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2779-S.SNP.8:15693060 chr08:015693060 0 W/15693060-15693060 FN2779-S SNP G -> A AC=2;AN=198;BQB=0.787399;DP=4309;DP4=1880,2158,25,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.43901e-22;MQSB=0.712401;RPB=0.998576;SGB=7.58854;VDB=0.999991;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.8:15700259 chr08:015700259 0 W/15700259-15700259 FN4202-S SNP G -> A AC=2;AN=170;BQB=0.99995;DP=2426;DP4=1168,1132,20,31;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000412201;MQB=9.53781e-30;MQSB=0.997135;RPB=0.526767;SGB=155.875;VDB=0.548127;EFF=INTRON(MODIFIER||||246|LOC_Os08g25799|protein_coding|CODING|LOC_Os08g25799.1|1|1) FN-111.SNP.8:15706750 chr08:015706750 0 W/15706750-15706750 FN-111 Single Base Substitution T-A INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN2323.SNP.8:15708429 chr08:015708429 0 W/15708429-15708429 FN2323 SNP T -> C AC=2;AN=192;BQB=0.400593;DP=4884;DP4=2306,2239,29,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.48508e-28;MQSB=0.232272;RPB=0.661033;SGB=236.349;VDB=0.68709;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.8:15708588 chr08:015708588 0 W/15708588-15708588 FN1224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1916.SNP.8:15708588 chr08:015708588 0 W/15708588-15708588 FN1916 Single Base Substitution G-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN579-S.SNP.8:15708588 chr08:015708588 0 W/15708588-15708588 FN579-S Single Base Substitution G-A INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2212-S.SNP.8:15710808 chr08:015710808 0 W/15710808-15710808 FN2212-S SNP A -> G AC=1;AN=190;BQB=0.988119;DP=4019;DP4=2078,1572,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000248818;MQB=2.72939e-08;MQSB=0.000768406;RPB=0.996791;SGB=41.5369;VDB=0.996434;EFF=UTR_5_PRIME(MODIFIER||1618||307|LOC_Os08g25820|protein_coding|CODING|LOC_Os08g25820.2|1|1),UTR_5_PRIME(MODIFIER||1618||307|LOC_Os08g25820|protein_coding|CODING|LOC_Os08g25820.1|1|1) FN405-S.SNP.8:15720756 chr08:015720756 0 W/15720756-15720756 FN405-S Single Base Substitution C-T INTERGENIC HOMO SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3788-S.SNP.8:15722761 chr08:015722761 0 W/15722761-15722761 FN3788-S SNP G -> A AC=1;AN=190;BQB=0.971161;DP=2599;DP4=1333,1164,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.95307e-08;MQSB=0.897554;RPB=0.953869;SGB=36.1006;VDB=0.542886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.8:15726741 chr08:015726741 0 W/15726741-15726741 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.721094;DP=2654;DP4=1103,1429,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.1677e-07;MQSB=0.552847;RPB=0.339266;SGB=23.2751;VDB=0.892881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.8:15728206 chr08:015728206 0 W/15728206-15728206 FN2545-S SNP C -> G AC=1;AN=198;BQB=0.989596;DP=4195;DP4=1975,1922,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.93038e-16;MQSB=0.996729;RPB=0.22389;SGB=22.1104;VDB=0.139872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.8:15741253 chr08:015741253 0 W/15741253-15741253 FN2334 SNP C -> A AC=1;AN=192;BQB=0.971442;DP=4628;DP4=2061,2322,12,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.84352e-11;MQSB=0.24706;RPB=0.888571;SGB=31.4783;VDB=0.606507;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.8:15748136 chr08:015748136 0 W/15748136-15748136 FN-169 Single Base Substitution C-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. W466-5-1.SNP.8:15753733 chr08:015753733 0 W/15753733-15753733 W466-5-1 Single Base Substitution C-A INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. W596-1-1.SNP.8:15762199 chr08:015762199 0 W/15762199-15762199 W596-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN590-S.SNP.8:15776478 chr08:015776478 0 W/15776478-15776478 FN590-S Single Base Substitution C-G INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN4305-S.SNP.8:15780850 chr08:015780850 0 W/15780850-15780850 FN4305-S SNP A -> G AC=1;AN=170;BQB=0.527641;DP=4843;DP4=2425,2278,6,13;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.000206484;MQB=2.91979e-05;MQSB=0.113545;RPB=0.995138;SGB=55.5339;VDB=0.842856;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q966|2002|LOC_Os08g25940|protein_coding|CODING|LOC_Os08g25940.1|3|1) FN1068-S.SNP.8:15781803 chr08:015781803 0 W/15781803-15781803 FN1068-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g25940 transposon protein, putative, unclassified, expressed SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN3319-S.SNP.8:15782063 chr08:015782063 0 W/15782063-15782063 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.99859;DP=7334;DP4=3787,3419,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0260431;MQB=4.65011e-05;MQSB=0.155602;RPB=0.342703;SGB=53.3568;VDB=0.551262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1371C|2002|LOC_Os08g25940|protein_coding|CODING|LOC_Os08g25940.1|3|1) FN-286.SNP.8:15782821 chr08:015782821 0 W/15782821-15782821 FN-286 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN4325-S.SNP.8:15784328 chr08:015784328 0 W/15784328-15784328 FN4325-S SNP C -> A AC=1;AN=170;BQB=0.566384;DP=4063;DP4=1998,1951,7,11;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0607925;MQB=0.944358;MQSB=0;RPB=0.266356;SGB=52.0913;VDB=0.349544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.8:15785514 chr08:015785514 0 W/15785514-15785514 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.962569;DP=3381;DP4=1490,1664,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00236616;MQB=2.0445e-06;MQSB=0.872992;RPB=0.993587;SGB=32.9588;VDB=0.126318;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A742T|1044|LOC_Os08g25950|protein_coding|CODING|LOC_Os08g25950.1|2|1) FN3324-S.SNP.8:15794738 chr08:015794738 0 W/15794738-15794738 FN3324-S SNP C -> T AC=2;AN=184;BQB=0.827657;DP=2895;DP4=1430,1351,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000345423;MQB=2.57038e-09;MQSB=0.9805;RPB=0.255098;SGB=71.3514;VDB=0.0128063;EFF=INTRON(MODIFIER||||965|LOC_Os08g25960|protein_coding|CODING|LOC_Os08g25960.1|1|1) FN3534-S.SNP.8:15798683 chr08:015798683 0 W/15798683-15798683 FN3534-S SNP C -> T AC=1;AN=188;BQB=0.971626;DP=2852;DP4=1196,1608,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30985e-08;MQSB=0.949512;RPB=0.963263;SGB=53.5223;VDB=0.105139;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.8:15799525 chr08:015799525 0 W/15799525-15799525 FN_789-2-1 Single Base Substitution C-T Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1529-S.SNP.8:15799798 chr08:015799798 0 W/15799798-15799798 FN1529-S Single Base Substitution C-A INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3913-S.SNP.8:15800427 chr08:015800427 0 W/15800427-15800427 FN3913-S SNP A -> G AC=1;AN=158;BQB=0.901253;DP=2648;DP4=1449,1105,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.99394e-13;MQSB=0.980521;RPB=0.891786;SGB=64.3985;VDB=0.118649;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.8:15805815 chr08:015805815 0 W/15805815-15805815 FN3532-S SNP C -> G AC=1;AN=188;BQB=0.962886;DP=3143;DP4=1463,1618,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00954502;MQB=1.52529e-08;MQSB=0.214317;RPB=0.92353;SGB=71.6954;VDB=0.511605;EFF=INTRON(MODIFIER||||1506|LOC_Os08g25970|protein_coding|CODING|LOC_Os08g25970.1|4|1) FN4165-S.SNP.8:15806355 chr08:015806355 0 W/15806355-15806355 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.994506;DP=2704;DP4=1346,1294,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84119e-10;MQSB=0.992331;RPB=0.0768446;SGB=45.206;VDB=0.842705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H1351Y|1506|LOC_Os08g25970|protein_coding|CODING|LOC_Os08g25970.1|5|1) FN1660-S.SNP.8:15808409 chr08:015808409 0 W/15808409-15808409 FN1660-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g25980 retrotransposon protein, putative, unclassified, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN367-S.SNP.8:15810054 chr08:015810054 0 W/15810054-15810054 FN367-S Single Base Substitution C-G INTRON HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN1697-S.SNP.8:15815596 chr08:015815596 0 W/15815596-15815596 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.163746;DP=4149;DP4=2170,1942,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0607375;MQB=0.0048915;MQSB=1.44677e-10;RPB=0.936202;SGB=20.9711;VDB=0.681738;EFF=INTRON(MODIFIER||||115|LOC_Os08g25990|protein_coding|CODING|LOC_Os08g25990.1|1|1) FN2462.SNP.8:15818673 chr08:015818673 0 W/15818673-15818673 FN2462 SNP C -> G AC=1;AN=200;BQB=0.57563;DP=5065;DP4=2040,2661,5,5;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0276407;MQB=0.0113263;MQSB=8.70963e-11;RPB=0.663521;SGB=25.849;VDB=0.111988;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.8:15826152 chr08:015826152 0 W/15826152-15826152 FN524-S Single Base Substitution C-G INTRON HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN3501-S.SNP.8:15835461 chr08:015835461 0 W/15835461-15835461 FN3501-S SNP C -> A AC=1;AN=188;BQB=0.997003;DP=2809;DP4=1260,1439,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.51133e-09;MQSB=0.976788;RPB=0.857417;SGB=58.0655;VDB=0.317419;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.8:15836700 chr08:015836700 0 W/15836700-15836700 FN2600-S SNP T -> A AC=1;AN=198;BQB=0.986758;DP=4226;DP4=2054,1968,11,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00212967;MQB=1.44678e-13;MQSB=3.30931e-07;RPB=0.453488;SGB=55.2955;VDB=0.336969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.8:15836701 chr08:015836701 0 W/15836701-15836701 FN2600-S SNP A -> T AC=1;AN=198;BQB=0.765894;DP=4242;DP4=2090,1986,8,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00212164;MQB=5.52169e-13;MQSB=1.43272e-06;RPB=0.423205;SGB=100.095;VDB=0.366981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.8:15843295 chr08:015843295 0 W/15843295-15843295 FN3511-S SNP T -> C AC=1;AN=188;BQB=0.965211;DP=2635;DP4=1155,1402,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.22584e-07;MQSB=0.853398;RPB=0.37417;SGB=25.3545;VDB=0.201801;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.8:15847112 chr08:015847112 0 W/15847112-15847112 FN1480-S Single Base Substitution A-G INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1472-S.SNP.8:15854856 chr08:015854856 0 W/15854856-15854856 FN1472-S Single Base Substitution C-T INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN785-S.SNP.8:15870121 chr08:015870121 0 W/15870121-15870121 FN785-S Single Base Substitution G-C INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN433-S.SNP.8:15870759 chr08:015870759 0 W/15870759-15870759 FN433-S Single Base Substitution T-C INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN3543-S.SNP.8:15875079 chr08:015875079 0 W/15875079-15875079 FN3543-S SNP T -> C AC=2;AN=188;BQB=0.887581;DP=2502;DP4=1213,1227,13,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.0158e-11;MQSB=0.99768;RPB=0.955777;SGB=60.7873;VDB=0.561811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.8:15877995 chr08:015877995 0 W/15877995-15877995 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.800579;DP=3496;DP4=1794,1579,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60807e-06;MQSB=0.893073;RPB=0.355944;SGB=32.2261;VDB=0.696154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.8:15881606 chr08:015881606 0 W/15881606-15881606 FN3759-S SNP G -> C AC=1;AN=190;BQB=0.93914;DP=2462;DP4=1222,1146,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97754e-07;MQSB=0.360647;RPB=0.243835;SGB=36.1006;VDB=0.474283;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.8:15889398 chr08:015889398 0 W/15889398-15889398 FN819-S Single Base Substitution A-T INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2734-S.SNP.8:15891074 chr08:015891074 0 W/15891074-15891074 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.996495;DP=5109;DP4=2357,2512,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09775e-10;MQSB=0.988095;RPB=0.927258;SGB=58.2954;VDB=0.311824;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.8:15892501 chr08:015892501 0 W/15892501-15892501 FN_N1-151-7 Single Base Substitution G-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2602-S.SNP.8:15893453 chr08:015893453 0 W/15893453-15893453 FN2602-S SNP T -> G AC=1;AN=198;BQB=0.995969;DP=4725;DP4=2167,2204,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0863492;MQB=0.147311;MQSB=0.0667774;RPB=0.538716;SGB=34.5346;VDB=0.913533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.8:15901698 chr08:015901698 0 W/15901698-15901698 FN2354 SNP A -> G AC=1;AN=192;BQB=0.665138;DP=4962;DP4=2633,1858,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000806127;MQB=8.28451e-10;MQSB=0.164244;RPB=0.918361;SGB=-67.3721;VDB=0.519551;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.8:15902750 chr08:015902750 0 W/15902750-15902750 FN475-S Single Base Substitution A-G INTERGENIC HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2611-S.SNP.8:15902773 chr08:015902773 0 W/15902773-15902773 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.179832;DP=4826;DP4=2378,2252,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207211;MQB=7.63199e-17;MQSB=0.885637;RPB=0.987789;SGB=71.1676;VDB=0.657116;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.8:15904044 chr08:015904044 0 W/15904044-15904044 FN-370 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g26140 retrotransposon, putative, centromere-specific, expressed SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3286-S.SNP.8:15905047 chr08:015905047 0 W/15905047-15905047 FN3286-S SNP C -> G AC=2;AN=184;BQB=0.924372;DP=3337;DP4=1754,1453,21,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.61747e-19;MQSB=0.844819;RPB=0.524843;SGB=37.2381;VDB=0.914763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.8:15910403 chr08:015910403 0 W/15910403-15910403 FN1703-S SNP T -> C AC=1;AN=188;BQB=0.0198712;DP=3539;DP4=1548,1966,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000198307;MQSB=0.998136;RPB=0.588515;SGB=-83.9838;VDB=0.666859;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.8:15914040 chr08:015914040 0 W/15914040-15914040 FN1064-S Single Base Substitution G-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1064-S.SNP.8:15914041 chr08:015914041 0 W/15914041-15914041 FN1064-S Single Base Substitution T-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1009-S.SNP.8:15915599 chr08:015915599 0 W/15915599-15915599 FN1009-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g26160 retrotransposon, putative, centromere-specific, expressed SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3443-S.SNP.8:15919229 chr08:015919229 0 W/15919229-15919229 FN3443-S SNP G -> A AC=2;AN=182;BQB=0.868632;DP=2561;DP4=1173,1286,9,11;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00117142;MQB=3.85119e-11;MQSB=0.955504;RPB=0.224335;SGB=84.9167;VDB=0.392122;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.8:15926723 chr08:015926723 0 W/15926723-15926723 FN4074-S SNP A -> G AC=1;AN=182;BQB=0.972897;DP=2529;DP4=1064,1361,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.64307e-08;MQSB=0.9657;RPB=0.760207;SGB=48.6223;VDB=0.628582;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.8:15928194 chr08:015928194 0 W/15928194-15928194 FN-89 Single Base Substitution T-C INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3757-S.SNP.8:15932056 chr08:015932056 0 W/15932056-15932056 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.808764;DP=2583;DP4=1055,1415,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000387147;MQB=1.39612e-06;MQSB=0.000630809;RPB=0.986603;SGB=58.2031;VDB=0.778595;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.8:15937045 chr08:015937045 0 W/15937045-15937045 FN909-S Single Base Substitution G-A INTRON HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2438.SNP.8:15938484 chr08:015938484 0 W/15938484-15938484 FN2438 SNP T -> A AC=2;AN=200;BQB=0.766753;DP=4174;DP4=1748,1890,20,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.3743e-27;MQSB=0.999997;RPB=0.440631;SGB=7.46555;VDB=2.56863e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.8:15945266 chr08:015945266 0 W/15945266-15945266 FN2631-S SNP G -> C AC=1;AN=200;BQB=0.953738;DP=8317;DP4=3539,4382,20,27;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.294938;MQB=0.0756592;MQSB=7.84727e-44;RPB=0.86632;SGB=4.4397;VDB=0.154628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.8:15951081 chr08:015951081 0 W/15951081-15951081 FN3675-S SNP G -> T AC=1;AN=190;BQB=0.925841;DP=2560;DP4=1454,1038,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.38591e-07;MQSB=0.93175;RPB=0.631362;SGB=39.9877;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.8:15951285 chr08:015951285 0 W/15951285-15951285 FN809-S Single Base Substitution C-G INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3967-S.SNP.8:15953443 chr08:015953443 0 W/15953443-15953443 FN3967-S SNP C -> A AC=2;AN=182;BQB=0.994229;DP=2852;DP4=1351,1382,25,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.19923e-27;MQSB=0.987008;RPB=0.974949;SGB=201.02;VDB=0.0863758;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.8:15955390 chr08:015955390 0 W/15955390-15955390 FN-348 Single Base Substitution C-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN2209-S.SNP.8:15959031 chr08:015959031 0 W/15959031-15959031 FN2209-S SNP C -> T AC=2;AN=190;BQB=0.706096;DP=3515;DP4=1657,1664,18,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000284495;MQB=3.61623e-18;MQSB=0.439981;RPB=0.21811;SGB=107.178;VDB=0.197173;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.8:15960404 chr08:015960404 0 W/15960404-15960404 FN564-S Single Base Substitution T-C INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN564-S.SNP.8:15960406 chr08:015960406 0 W/15960406-15960406 FN564-S Single Base Substitution T-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN3468-S.SNP.8:15962325 chr08:015962325 0 W/15962325-15962325 FN3468-S SNP G -> T AC=1;AN=184;BQB=0.974054;DP=3542;DP4=1866,1584,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08669e-13;MQSB=0.983623;RPB=0.844865;SGB=98.4821;VDB=0.52821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-364.SNP.8:15963585 chr08:015963585 0 W/15963585-15963585 FN-364 Single Base Substitution G-A INTERGENIC HOMO SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2666-S.SNP.8:15964272 chr08:015964272 0 W/15964272-15964272 FN2666-S SNP C -> G AC=1;AN=200;BQB=0.305431;DP=4854;DP4=2550,1995,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91411e-19;MQSB=0.706331;RPB=0.105759;SGB=108.768;VDB=0.190502;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.8:15970885 chr08:015970885 0 W/15970885-15970885 FN-262 Single Base Substitution T-A INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN-305.SNP.8:15971154 chr08:015971154 0 W/15971154-15971154 FN-305 Single Base Substitution G-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1256-S.SNP.8:15972721 chr08:015972721 0 W/15972721-15972721 FN1256-S Single Base Substitution G-T INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2220-S.SNP.8:15975824 chr08:015975824 0 W/15975824-15975824 FN2220-S SNP G -> C AC=1;AN=190;BQB=0.118676;DP=5085;DP4=2204,2555,15,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.86257e-17;MQSB=0.870446;RPB=0.998651;SGB=32.0809;VDB=0.716976;EFF=UTR_5_PRIME(MODIFIER||28||261|LOC_Os08g26220|protein_coding|CODING|LOC_Os08g26220.1|2|1),UTR_5_PRIME(MODIFIER||28||261|LOC_Os08g26220|protein_coding|CODING|LOC_Os08g26220.2|2|1) FN488-S.SNP.8:15976251 chr08:015976251 0 W/15976251-15976251 FN488-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1568-S.SNP.8:15985283 chr08:015985283 0 W/15985283-15985283 FN1568-S Single Base Substitution C-T INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN3890-S.SNP.8:15990742 chr08:015990742 0 W/15990742-15990742 FN3890-S SNP T -> A AC=2;AN=158;BQB=0.759278;DP=2494;DP4=1236,1151,20,29;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.23342e-26;MQSB=0.948538;RPB=0.999639;SGB=174.544;VDB=0.45053;EFF=INTRON(MODIFIER||||149|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.2|1|1),INTRON(MODIFIER||||149|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.3|1|1),INTRON(MODIFIER||||134|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.4|1|1),INTRON(MODIFIER||||132|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.5|1|1),INTRON(MODIFIER||||132|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.6|1|1),INTRON(MODIFIER||||95|LOC_Os08g26230|protein_coding|CODING|LOC_Os08g26230.7|1|1) FN2109-S.SNP.8:15992668 chr08:015992668 0 W/15992668-15992668 FN2109-S SNP G -> A AC=1;AN=168;BQB=0.41303;DP=3659;DP4=1801,1817,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.56494e-13;MQSB=0.984249;RPB=0.867417;SGB=18.4989;VDB=0.287833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.8:15995045 chr08:015995045 0 W/15995045-15995045 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.950095;DP=3788;DP4=1543,1779,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.66846e-13;MQSB=0.47312;RPB=0.845994;SGB=113.881;VDB=0.513858;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.8:15996787 chr08:015996787 0 W/15996787-15996787 FN495-S Single Base Substitution C-G INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN927-S.SNP.8:15996787 chr08:015996787 0 W/15996787-15996787 FN927-S Single Base Substitution C-G INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN-83.SNP.8:16005574 chr08:016005574 0 W/16005574-16005574 FN-83 Single Base Substitution G-A INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN-180.SNP.8:16005965 chr08:016005965 0 W/16005965-16005965 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN4241-S.SNP.8:16017661 chr08:016017661 0 W/16017661-16017661 FN4241-S SNP T -> C AC=1;AN=170;BQB=0.993264;DP=2575;DP4=1337,1111,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=13;MQ0F=0.380971;MQB=0.0227778;MQSB=0;RPB=0.0745173;SGB=58.9766;VDB=0.294666;EFF=INTRON(MODIFIER||||1032|LOC_Os08g26280|protein_coding|CODING|LOC_Os08g26280.1|8|1) FN866-S.SNP.8:16029632 chr08:016029632 0 W/16029632-16029632 FN866-S Single Base Substitution A-T INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN866-S.SNP.8:16029640 chr08:016029640 0 W/16029640-16029640 FN866-S Single Base Substitution A-G INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN1277-S.SNP.8:16029746 chr08:016029746 0 W/16029746-16029746 FN1277-S Single Base Substitution G-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1277-S.SNP.8:16029748 chr08:016029748 0 W/16029748-16029748 FN1277-S Single Base Substitution G-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1440-S.SNP.8:16030401 chr08:016030401 0 W/16030401-16030401 FN1440-S Single Base Substitution T-C INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2558-S.SNP.8:16031222 chr08:016031222 0 W/16031222-16031222 FN2558-S SNP C -> A AC=1;AN=198;BQB=0.0220429;DP=4440;DP4=2252,1962,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.12585e-07;MQSB=0.971248;RPB=0.78248;SGB=6.15916;VDB=0.204202;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.8:16031887 chr08:016031887 0 W/16031887-16031887 FN4031-S SNP C -> G AC=2;AN=168;BQB=0.996995;DP=2614;DP4=1119,1356,17,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.11318e-24;MQSB=0.887015;RPB=0.899759;SGB=131.395;VDB=0.165585;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.8:16034217 chr08:016034217 0 W/16034217-16034217 FN732-S Single Base Substitution C-G INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN732-S.SNP.8:16034221 chr08:016034221 0 W/16034221-16034221 FN732-S Single Base Substitution T-G INTERGENIC HOMO SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2308.SNP.8:16036186 chr08:016036186 0 W/16036186-16036186 FN2308 SNP G -> T AC=1;AN=192;BQB=0.78707;DP=4600;DP4=2178,2083,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.31701e-11;MQSB=0.601227;RPB=0.894912;SGB=81.1609;VDB=0.486867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.8:16037096 chr08:016037096 0 W/16037096-16037096 FN2446 SNP A -> G AC=1;AN=200;BQB=0.787932;DP=4614;DP4=1947,2352,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000650195;MQB=9.87093e-11;MQSB=0.715403;RPB=0.795119;SGB=81.8956;VDB=0.504165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.8:16041212 chr08:016041212 0 W/16041212-16041212 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.989372;DP=3053;DP4=1390,1581,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00131019;MQB=9.78174e-09;MQSB=0.996418;RPB=0.622327;SGB=71.3514;VDB=0.698691;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V240I|422|LOC_Os08g26300|protein_coding|CODING|LOC_Os08g26300.1|3|1) FN2166-S.SNP.8:16045578 chr08:016045578 0 W/16045578-16045578 FN2166-S SNP C -> A AC=1;AN=168;BQB=0.0137616;DP=6889;DP4=3914,2881,20,8;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0608216;MQB=0.0340672;MQSB=0.000717714;RPB=0.409079;SGB=-108.339;VDB=0.0381223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:16047652 chr08:016047652 0 W/16047652-16047652 FN3382-S SNP T -> A AC=2;AN=184;BQB=0.928022;DP=3154;DP4=1438,1570,14,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.62045e-18;MQSB=0.990646;RPB=0.607625;SGB=102.662;VDB=0.521686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.8:16056037 chr08:016056037 0 W/16056037-16056037 FN2334 SNP G -> A AC=1;AN=192;BQB=0.988549;DP=4442;DP4=2141,2082,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.95729e-09;MQSB=0.878068;RPB=0.55521;SGB=39.78;VDB=0.340689;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.8:16057415 chr08:016057415 0 W/16057415-16057415 FN883-S Single Base Substitution G-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN1097-S.SNP.8:16058468 chr08:016058468 0 W/16058468-16058468 FN1097-S Single Base Substitution G-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN373-S.SNP.8:16060546 chr08:016060546 0 W/16060546-16060546 FN373-S Single Base Substitution T-A INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3627-S.SNP.8:16065171 chr08:016065171 0 W/16065171-16065171 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.471104;DP=2849;DP4=1345,1411,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000702001;MQB=7.34882e-07;MQSB=0.848923;RPB=0.76258;SGB=44.5415;VDB=0.989047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G47R|103|LOC_Os08g26350|protein_coding|CODING|LOC_Os08g26350.1|3|1) FN3627-S.SNP.8:16065186 chr08:016065186 0 W/16065186-16065186 FN3627-S SNP A -> T AC=1;AN=190;BQB=0.881529;DP=2860;DP4=1296,1470,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.58524e-08;MQSB=0.673421;RPB=0.96331;SGB=43.2083;VDB=0.940297;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S42T|103|LOC_Os08g26350|protein_coding|CODING|LOC_Os08g26350.1|3|1) FN2614-S.SNP.8:16067265 chr08:016067265 0 W/16067265-16067265 FN2614-S SNP C -> T AC=1;AN=190;BQB=0.896297;DP=4144;DP4=2020,1885,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.34866e-08;MQSB=0.98159;RPB=0.978793;SGB=40.149;VDB=0.453798;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.8:16072755 chr08:016072755 0 W/16072755-16072755 FN860-S Single Base Substitution C-T INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2374.SNP.8:16073786 chr08:016073786 0 W/16073786-16073786 FN2374 SNP C -> G AC=2;AN=192;BQB=0.483928;DP=3943;DP4=1905,1685,22,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.71308e-21;MQSB=0.936285;RPB=0.42466;SGB=128.889;VDB=0.373326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.8:16078023 chr08:016078023 0 W/16078023-16078023 FN3627-S SNP A -> T AC=1;AN=190;BQB=0.772437;DP=3497;DP4=1516,1856,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01721e-13;MQSB=0.995643;RPB=0.0634578;SGB=90.0802;VDB=0.207456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.8:16078024 chr08:016078024 0 W/16078024-16078024 FN3627-S SNP G -> T AC=1;AN=190;BQB=0.758454;DP=3513;DP4=1480,1821,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25583e-14;MQSB=0.941002;RPB=0.174861;SGB=46.6446;VDB=0.392992;EFF=INTERGENIC(MODIFIER||||||||||1) FN853-S.SNP.8:16078621 chr08:016078621 0 W/16078621-16078621 FN853-S Single Base Substitution C-A INTERGENIC HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3872-S.SNP.8:16079168 chr08:016079168 0 W/16079168-16079168 FN3872-S SNP C -> T AC=2;AN=158;BQB=0.923162;DP=2429;DP4=948,1367,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.12129e-08;MQSB=0.527241;RPB=0.565817;SGB=82.0227;VDB=0.018555;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q138*|151|LOC_Os08g26380|protein_coding|CODING|LOC_Os08g26380.1|1|1) FN-161.SNP.8:16079804 chr08:016079804 0 W/16079804-16079804 FN-161 Single Base Substitution T-A INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1345-S.SNP.8:16082487 chr08:016082487 0 W/16082487-16082487 FN1345-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g26390 retrotransposon protein, putative, unclassified, expressed SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN429-S.SNP.8:16087853 chr08:016087853 0 W/16087853-16087853 FN429-S Single Base Substitution G-T INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN429-S.SNP.8:16087856 chr08:016087856 0 W/16087856-16087856 FN429-S Single Base Substitution A-G INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2442.SNP.8:16090060 chr08:016090060 0 W/16090060-16090060 FN2442 SNP C -> T AC=1;AN=200;BQB=0.198083;DP=4434;DP4=2086,2099,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.54548e-08;MQSB=0.871252;RPB=0.744459;SGB=26.8797;VDB=0.166173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.8:16094165 chr08:016094165 0 W/16094165-16094165 FN2387 SNP C -> A AC=1;AN=192;BQB=0.626699;DP=4513;DP4=2092,2169,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000221582;MQB=5.2865e-07;MQSB=0.999002;RPB=0.336936;SGB=53.7748;VDB=0.666103;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H71N|98|LOC_Os08g26409|protein_coding|CODING|LOC_Os08g26409.1|1|1) FN-55.SNP.8:16102072 chr08:016102072 0 W/16102072-16102072 FN-55 Single Base Substitution C-T INTERGENIC HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN2281.SNP.8:16103747 chr08:016103747 0 W/16103747-16103747 FN2281 SNP A -> G AC=1;AN=192;BQB=0.625393;DP=4778;DP4=2217,2276,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=28;MQ0F=0.17455;MQB=0.428789;MQSB=1.05506e-12;RPB=0.529163;SGB=113.111;VDB=0.249453;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q84|1236|LOC_Os08g26430|protein_coding|CODING|LOC_Os08g26430.1|1|1) FN1346-S.SNP.8:16106832 chr08:016106832 0 W/16106832-16106832 FN1346-S Single Base Substitution C-A INTRON HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN-73.SNP.8:16110922 chr08:016110922 0 W/16110922-16110922 FN-73 Single Base Substitution C-T INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1337-S.SNP.8:16113494 chr08:016113494 0 W/16113494-16113494 FN1337-S Single Base Substitution C-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3517-S.SNP.8:16114190 chr08:016114190 0 W/16114190-16114190 FN3517-S SNP T -> C AC=1;AN=188;BQB=0.727852;DP=2745;DP4=1270,1414,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.98303e-07;MQSB=0.755264;RPB=0.27792;SGB=48.979;VDB=0.338575;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S38|1087|LOC_Os08g26450|protein_coding|CODING|LOC_Os08g26450.1|1|1) FN3292-S.SNP.8:16115546 chr08:016115546 0 W/16115546-16115546 FN3292-S SNP C -> T AC=1;AN=184;BQB=0.173023;DP=2875;DP4=1474,1306,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58415e-07;MQSB=0.998955;RPB=0.541918;SGB=-14.714;VDB=0.211994;EFF=INTRON(MODIFIER||||1087|LOC_Os08g26450|protein_coding|CODING|LOC_Os08g26450.1|1|1) FN2583-S.SNP.8:16116017 chr08:016116017 0 W/16116017-16116017 FN2583-S SNP T -> A AC=1;AN=200;BQB=0.366306;DP=4884;DP4=2262,2433,9,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.36825e-07;MQSB=0.844862;RPB=0.845297;SGB=4.67442;VDB=0.370849;EFF=INTRON(MODIFIER||||1087|LOC_Os08g26450|protein_coding|CODING|LOC_Os08g26450.1|1|1) FN1709-S.SNP.8:16117429 chr08:016117429 0 W/16117429-16117429 FN1709-S SNP G -> T AC=1;AN=188;BQB=0.724171;DP=3395;DP4=1508,1849,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00016042;MQSB=0.0019435;RPB=0.990188;SGB=8.62479;VDB=0.480731;EFF=INTRON(MODIFIER||||1087|LOC_Os08g26450|protein_coding|CODING|LOC_Os08g26450.1|2|1) FN859-S.SNP.8:16121298 chr08:016121298 0 W/16121298-16121298 FN859-S Single Base Substitution G-A INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN_770-6-1.SNP.8:16121357 chr08:016121357 0 W/16121357-16121357 FN_770-6-1 Single Base Substitution G-A Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2315.SNP.8:16121809 chr08:016121809 0 W/16121809-16121809 FN2315 SNP G -> C AC=1;AN=192;BQB=0.999447;DP=4663;DP4=2074,2231,8,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.88656e-11;MQSB=0.997392;RPB=0.997395;SGB=75.4235;VDB=0.923676;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.8:16123950 chr08:016123950 0 W/16123950-16123950 FN-65 Single Base Substitution G-A INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3564-S.SNP.8:16124455 chr08:016124455 0 W/16124455-16124455 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.901184;DP=3054;DP4=1210,1403,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=2.47117e-05;MQSB=8.74455e-14;RPB=0.34147;SGB=85.3253;VDB=0.793841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.8:16126253 chr08:016126253 0 W/16126253-16126253 FN4165-S SNP G -> A AC=1;AN=170;BQB=0.969324;DP=2827;DP4=1386,1360,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0672091;MQB=0.809497;MQSB=1.45917e-11;RPB=0.775303;SGB=38.987;VDB=0.788314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.8:16129450 chr08:016129450 0 W/16129450-16129450 FN2602-S SNP G -> A AC=1;AN=194;BQB=0.924799;DP=3467;DP4=1645,1659,11,9;HOB=5.31406e-05;ICB=0.000106829;MQ=46;MQ0F=0.00144217;MQB=2.43224e-06;MQSB=0.979993;RPB=0.385082;SGB=86.3098;VDB=0.209278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2163-S.SNP.8:16130164 chr08:016130164 0 W/16130164-16130164 FN2163-S SNP C -> A AC=2;AN=168;BQB=0.905009;DP=2342;DP4=712,1583,4,9;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0111016;MQB=0.00717505;MQSB=5.35323e-20;RPB=0.0835578;SGB=17.3231;VDB=0.85881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.8:16130328 chr08:016130328 0 W/16130328-16130328 FN2606-S SNP G -> T AC=1;AN=192;BQB=0.736063;DP=3737;DP4=1989,1544,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0120417;MQB=9.63152e-05;MQSB=4.88118e-13;RPB=0.922294;SGB=-16.2163;VDB=0.502891;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R237|245|LOC_Os08g26490|protein_coding|CODING|LOC_Os08g26490.1|1|1) FN2334.SNP.8:16133042 chr08:016133042 0 W/16133042-16133042 FN2334 SNP G -> A AC=1;AN=192;BQB=0.800061;DP=4654;DP4=2314,2091,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000429738;MQB=6.22106e-08;MQSB=0.845891;RPB=0.689322;SGB=4.22611;VDB=0.542796;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.8:16135072 chr08:016135072 0 W/16135072-16135072 FN542-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g26500 retrotransposon protein, putative, unclassified, expressed SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1568-S.SNP.8:16141389 chr08:016141389 0 W/16141389-16141389 FN1568-S Single Base Substitution C-T INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1568-S.SNP.8:16142178 chr08:016142178 0 W/16142178-16142178 FN1568-S Single Base Substitution G-A SPLICE_SITE_REGION Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2218-S.SNP.8:16143536 chr08:016143536 0 W/16143536-16143536 FN2218-S SNP T -> A AC=2;AN=190;BQB=0.729292;DP=4756;DP4=2163,2270,18,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.93043e-22;MQSB=0.973208;RPB=0.901489;SGB=146.271;VDB=0.0534029;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.8:16150634 chr08:016150634 0 W/16150634-16150634 FN537-S Single Base Substitution A-C INTRON HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN4161-S.SNP.8:16159519 chr08:016159519 0 W/16159519-16159519 FN4161-S SNP G -> T AC=1;AN=170;BQB=0.998639;DP=2664;DP4=1319,1260,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.3407e-13;MQSB=0.99692;RPB=0.851724;SGB=34.5398;VDB=0.628047;EFF=INTRON(MODIFIER||||235|LOC_Os08g26544|protein_coding|CODING|LOC_Os08g26544.1|1|1) FN3823-S.SNP.8:16167555 chr08:016167555 0 W/16167555-16167555 FN3823-S SNP G -> T AC=1;AN=190;BQB=0.963626;DP=2771;DP4=1544,1107,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.31973e-06;MQSB=0.979307;RPB=0.708013;SGB=44.5415;VDB=0.684373;EFF=INTRON(MODIFIER||||188|LOC_Os08g26560|protein_coding|CODING|LOC_Os08g26560.1|1|1) FN1211-S.SNP.8:16172165 chr08:016172165 0 W/16172165-16172165 FN1211-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN852-S.SNP.8:16174340 chr08:016174340 0 W/16174340-16174340 FN852-S Single Base Substitution C-G INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN1575-S.SNP.8:16174569 chr08:016174569 0 W/16174569-16174569 FN1575-S Single Base Substitution G-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN1638-S.SNP.8:16175887 chr08:016175887 0 W/16175887-16175887 FN1638-S Single Base Substitution A-G INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN4129-S.SNP.8:16176177 chr08:016176177 0 W/16176177-16176177 FN4129-S SNP C -> T AC=1;AN=182;BQB=0.927337;DP=2987;DP4=1499,1411,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.09272e-12;MQSB=0.883872;RPB=0.268756;SGB=60.2037;VDB=0.75218;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.8:16185132 chr08:016185132 0 W/16185132-16185132 FN267-S Single Base Substitution A-C INTRON HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN4206-S.SNP.8:16185260 chr08:016185260 0 W/16185260-16185260 FN4206-S SNP G -> A AC=1;AN=170;BQB=0.793183;DP=2352;DP4=1216,1062,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.1456e-08;MQSB=0.979326;RPB=0.801953;SGB=70.0854;VDB=0.917641;EFF=INTRON(MODIFIER||||198|LOC_Os08g26610|protein_coding|CODING|LOC_Os08g26610.1|2|1) FN2492.SNP.8:16188026 chr08:016188026 0 W/16188026-16188026 FN2492 SNP G -> A AC=1;AN=200;BQB=0.851137;DP=4461;DP4=2302,1915,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34609e-08;MQSB=0.60208;RPB=0.548978;SGB=54.6902;VDB=0.297533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.8:16191740 chr08:016191740 0 W/16191740-16191740 FN2645-S SNP C -> A AC=2;AN=200;BQB=0.983684;DP=4748;DP4=2111,2371,18,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.64309e-24;MQSB=0.953307;RPB=0.9752;SGB=159.24;VDB=0.936496;EFF=INTRON(MODIFIER||||116|LOC_Os08g26620|protein_coding|CODING|LOC_Os08g26620.1|2|1) FN3280-S.SNP.8:16197797 chr08:016197797 0 W/16197797-16197797 FN3280-S SNP G -> A AC=1;AN=184;BQB=0.646505;DP=4171;DP4=2311,1728,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.000959003;MQB=0.0512956;MQSB=0.977235;RPB=0.684381;SGB=89.4385;VDB=0.404132;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.8:16199180 chr08:016199180 0 W/16199180-16199180 FN-125 Single Base Substitution C-T INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3454-S.SNP.8:16208283 chr08:016208283 0 W/16208283-16208283 FN3454-S SNP A -> T AC=1;AN=184;BQB=0.630205;DP=2853;DP4=1238,1503,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.3639e-07;MQSB=0.818136;RPB=0.607315;SGB=0.715177;VDB=0.964611;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.8:16214692 chr08:016214692 0 W/16214692-16214692 FN-342 Single Base Substitution G-T INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1630-S.SNP.8:16216144 chr08:016216144 0 W/16216144-16216144 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2557-S.SNP.8:16223114 chr08:016223114 0 W/16223114-16223114 FN2557-S SNP C -> A AC=1;AN=186;BQB=0.891972;DP=4241;DP4=2074,1879,9,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=6.51824e-08;MQSB=0.999964;RPB=0.480536;SGB=21.559;VDB=0.735282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.8:16227174 chr08:016227174 0 W/16227174-16227174 FN3715-S SNP G -> C AC=1;AN=190;BQB=0.988222;DP=2986;DP4=1497,1371,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.94808e-10;MQSB=0.857318;RPB=0.133682;SGB=53.8699;VDB=0.117008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.8:16235505 chr08:016235505 0 W/16235505-16235505 FN1250-S Single Base Substitution G-T INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1250-S.SNP.8:16235506 chr08:016235506 0 W/16235506-16235506 FN1250-S Single Base Substitution A-T INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN4255-S.SNP.8:16239983 chr08:016239983 0 W/16239983-16239983 FN4255-S SNP T -> C AC=1;AN=170;BQB=0.833763;DP=2267;DP4=1122,1035,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.37969e-10;MQSB=0.988256;RPB=0.931313;SGB=74.528;VDB=0.305641;EFF=UTR_5_PRIME(MODIFIER||45||106|LOC_Os08g26700|protein_coding|CODING|LOC_Os08g26700.2|1|1),UTR_5_PRIME(MODIFIER||45||105|LOC_Os08g26700|protein_coding|CODING|LOC_Os08g26700.3|1|1),UTR_5_PRIME(MODIFIER||45||134|LOC_Os08g26700|protein_coding|CODING|LOC_Os08g26700.1|1|1) FN2681-S.SNP.8:16240420 chr08:016240420 0 W/16240420-16240420 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.701515;DP=3573;DP4=1370,1968,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3645e-08;MQSB=0.95184;RPB=0.674162;SGB=24.2746;VDB=0.445855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.8:16242865 chr08:016242865 0 W/16242865-16242865 FN2782-S SNP A -> T AC=1;AN=186;BQB=0.908927;DP=4201;DP4=2071,1954,9,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.72707e-10;MQSB=0.900101;RPB=0.99978;SGB=43.7442;VDB=0.0863147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.8:16244820 chr08:016244820 0 W/16244820-16244820 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2197-S.SNP.8:16245376 chr08:016245376 0 W/16245376-16245376 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.746975;DP=5128;DP4=2265,2446,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.48845e-07;MQSB=0.758216;RPB=0.101642;SGB=23.6597;VDB=0.0157933;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.8:16247298 chr08:016247298 0 W/16247298-16247298 FN501-S Single Base Substitution T-A STOP_GAINED HET LOC_Os08g26710 plant protein of unknown function domain containing protein, expressed SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2091-S.SNP.8:16250490 chr08:016250490 0 W/16250490-16250490 FN2091-S SNP A -> C AC=1;AN=168;BQB=0.482744;DP=3293;DP4=1403,1861,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06714e-09;MQSB=0.971077;RPB=0.39955;SGB=-40.0741;VDB=0.754211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.8:16259459 chr08:016259459 0 W/16259459-16259459 FN1471-S SNP T -> C AC=1;AN=188;BQB=0.83224;DP=2158;DP4=135,2003,1,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.94815e-08;MQSB=2.19365e-21;RPB=0.92656;SGB=35.9843;VDB=0.146427;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.8:16259999 chr08:016259999 0 W/16259999-16259999 FN2334 SNP A -> T AC=1;AN=192;BQB=0.709505;DP=4742;DP4=2456,2050,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.80623e-05;MQSB=0.926806;RPB=0.623461;SGB=16.0922;VDB=0.415179;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.8:16262036 chr08:016262036 0 W/16262036-16262036 FN1381-S Single Base Substitution G-A INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1156-XA21.SNP.8:16263448 chr08:016263448 0 W/16263448-16263448 FN1156-XA21 Single Base Substitution T-C INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.8:16263449 chr08:016263449 0 W/16263449-16263449 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1763-S.SNP.8:16263901 chr08:016263901 0 W/16263901-16263901 FN1763-S SNP C -> T AC=1;AN=188;BQB=0.931616;DP=1438;DP4=648,743,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53439e-05;MQSB=0.992893;RPB=0.339372;SGB=15.903;VDB=0.66732;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.8:16264354 chr08:016264354 0 W/16264354-16264354 FN-71 Single Base Substitution G-A INTRON HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN4175-S.SNP.8:16267093 chr08:016267093 0 W/16267093-16267093 FN4175-S SNP C -> T AC=2;AN=170;BQB=0.940682;DP=2513;DP4=1131,1277,17,36;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.38379e-28;MQSB=0.967238;RPB=0.890072;SGB=224.593;VDB=0.0813321;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S155|288|LOC_Os08g26740|protein_coding|CODING|LOC_Os08g26740.1|3|1) FN2674-S.SNP.8:16268085 chr08:016268085 0 W/16268085-16268085 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.162858;DP=4826;DP4=1877,2568,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.44415e-06;MQSB=0.52189;RPB=0.859206;SGB=-56.9157;VDB=0.271954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.8:16269214 chr08:016269214 0 W/16269214-16269214 FN2740-S SNP G -> T AC=2;AN=200;BQB=0.983708;DP=4732;DP4=2348,2091,23,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.33518e-20;MQSB=0.941505;RPB=0.446088;SGB=141.214;VDB=0.911964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.8:16269601 chr08:016269601 0 W/16269601-16269601 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.209715;DP=2762;DP4=1270,1308,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.40877e-12;MQSB=0.993384;RPB=0.61405;SGB=-80.6216;VDB=0.436108;EFF=INTERGENIC(MODIFIER||||||||||1) FN866-S.SNP.8:16270921 chr08:016270921 0 W/16270921-16270921 FN866-S Single Base Substitution T-A INTRON HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN866-S.SNP.8:16270922 chr08:016270922 0 W/16270922-16270922 FN866-S Single Base Substitution C-A INTRON HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN2307.SNP.8:16272189 chr08:016272189 0 W/16272189-16272189 FN2307 SNP C -> T AC=1;AN=192;BQB=0.998809;DP=4001;DP4=1602,2140,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.20503e-09;MQSB=0.271206;RPB=0.904848;SGB=28.9139;VDB=0.409153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.8:16290792 chr08:016290792 0 W/16290792-16290792 FN1029-S Single Base Substitution A-G INTERGENIC HOMO SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2554-S.SNP.8:16295004 chr08:016295004 0 W/16295004-16295004 FN2554-S SNP G -> A AC=1;AN=186;BQB=0.805288;DP=3553;DP4=1860,1486,12,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.41277e-12;MQSB=0.828753;RPB=0.951946;SGB=72.5051;VDB=0.809308;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.8:16306030 chr08:016306030 0 W/16306030-16306030 FN478-S Single Base Substitution G-A INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2561-S.SNP.8:16306710 chr08:016306710 0 W/16306710-16306710 FN2561-S SNP C -> T AC=1;AN=186;BQB=0.66522;DP=3223;DP4=1449,1524,4,3;HOB=5.78101e-05;ICB=0.000116242;MQ=46;MQ0F=0;MQB=0.0158349;MQSB=0.0188803;RPB=0.926969;SGB=26.5745;VDB=0.81798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.8:16310764 chr08:016310764 0 W/16310764-16310764 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.997051;DP=2827;DP4=1300,1373,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.000135027;MQSB=0.00254744;RPB=0.427984;SGB=39.6545;VDB=0.859771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.8:16344861 chr08:016344861 0 W/16344861-16344861 FN2210-S SNP G -> A AC=1;AN=188;BQB=0.0935528;DP=4083;DP4=2113,1738,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.70212e-05;MQSB=0.00610621;RPB=0.994123;SGB=1.00337;VDB=0.994159;EFF=INTRON(MODIFIER||||331|LOC_Os08g26870|protein_coding|CODING|LOC_Os08g26870.1|1|1),INTRON(MODIFIER||||325|LOC_Os08g26870|protein_coding|CODING|LOC_Os08g26870.2|1|1),INTRON(MODIFIER||||325|LOC_Os08g26870|protein_coding|CODING|LOC_Os08g26870.3|1|1),INTRON(MODIFIER||||317|LOC_Os08g26870|protein_coding|CODING|LOC_Os08g26870.4|1|1),INTRON(MODIFIER||||317|LOC_Os08g26870|protein_coding|CODING|LOC_Os08g26870.5|1|1) FN2680-S.SNP.8:16350656 chr08:016350656 0 W/16350656-16350656 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.772769;DP=4835;DP4=2517,2055,16,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.60612e-09;MQSB=0.235841;RPB=0.855091;SGB=127.947;VDB=0.101578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.8:16351591 chr08:016351591 0 W/16351591-16351591 FN2411 SNP A -> T AC=1;AN=198;BQB=0.00871309;DP=4408;DP4=2081,1862,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.20737e-10;MQSB=1.5243e-13;RPB=0.798047;SGB=-7.05853;VDB=0.891914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.8:16352759 chr08:016352759 0 W/16352759-16352759 FN2619-S SNP A -> G AC=1;AN=190;BQB=0.954661;DP=3911;DP4=1731,2033,15,19;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0;MQB=1.71194e-07;MQSB=0.902301;RPB=0.617168;SGB=150.641;VDB=0.72038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.8:16352803 chr08:016352803 0 W/16352803-16352803 FN1647-S Single Base Substitution C-T INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN4110-S.SNP.8:16358165 chr08:016358165 0 W/16358165-16358165 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.354329;DP=2385;DP4=1131,1188,12,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.43223e-10;MQSB=0.82057;RPB=0.982004;SGB=80.1982;VDB=0.282915;EFF=UTR_3_PRIME(MODIFIER||2249||107|LOC_Os08g26875|protein_coding|CODING|LOC_Os08g26875.1|1|1) FN-165.SNP.8:16362610 chr08:016362610 0 W/16362610-16362610 FN-165 Single Base Substitution C-T INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3391-S.SNP.8:16367067 chr08:016367067 0 W/16367067-16367067 FN3391-S SNP T -> A AC=1;AN=184;BQB=0.576141;DP=2651;DP4=1167,1391,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000749532;MQSB=0.915473;RPB=0.989272;SGB=39.2697;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.8:16367810 chr08:016367810 0 W/16367810-16367810 FN1339-S Single Base Substitution T-C INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.8:16367810 chr08:016367810 0 W/16367810-16367810 FN2311 SNP T -> C AC=1;AN=192;BQB=0.308922;DP=4347;DP4=2113,1880,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=1.3891e-11;MQSB=0.0034586;RPB=0.97237;SGB=85.7252;VDB=0.152277;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.8:16370885 chr08:016370885 0 W/16370885-16370885 FN1543-S Single Base Substitution G-A INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN2242-S.SNP.8:16371478 chr08:016371478 0 W/16371478-16371478 FN2242-S SNP C -> G AC=1;AN=188;BQB=0.934726;DP=4826;DP4=2314,2052,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.41894e-06;MQSB=0.00578334;RPB=0.608891;SGB=31.3213;VDB=0.519269;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.8:16378278 chr08:016378278 0 W/16378278-16378278 FN323-S Single Base Substitution T-C INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2690-S.SNP.8:16382093 chr08:016382093 0 W/16382093-16382093 FN2690-S SNP T -> A AC=2;AN=200;BQB=0.0608166;DP=4850;DP4=2233,2427,21,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.23482e-24;MQSB=0.165688;RPB=0.323882;SGB=2.62419;VDB=0.465985;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.8:16437471 chr08:016437471 0 W/16437471-16437471 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.830975;DP=2611;DP4=1325,1222,16,10;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0;MQB=0.000272416;MQSB=0.0557304;RPB=0.742169;SGB=79.6325;VDB=0.996531;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.8:16447489 chr08:016447489 0 W/16447489-16447489 FN690-S Single Base Substitution G-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN3280-S.SNP.8:16448122 chr08:016448122 0 W/16448122-16448122 FN3280-S SNP A -> T AC=1;AN=184;BQB=0.998628;DP=3034;DP4=1289,1516,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00197759;MQB=2.27001e-05;MQSB=0.000219408;RPB=0.994785;SGB=28.3187;VDB=0.982469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.8:16451361 chr08:016451361 0 W/16451361-16451361 FN1075-S Single Base Substitution A-G INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1916.SNP.8:16512848 chr08:016512848 0 W/16512848-16512848 FN1916 Single Base Substitution C-T HET LOC_Os08g27020 expressed protein SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN707-S.SNP.8:16519419 chr08:016519419 0 W/16519419-16519419 FN707-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2418.SNP.8:16519690 chr08:016519690 0 W/16519690-16519690 FN2418 SNP A -> T AC=1;AN=200;BQB=0.306505;DP=4489;DP4=2174,1821,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.83476e-06;MQSB=0.887278;RPB=0.920776;SGB=21.6694;VDB=0.985302;EFF=UTR_3_PRIME(MODIFIER||234||310|LOC_Os08g27040|protein_coding|CODING|LOC_Os08g27040.1|9|1) FN-307.SNP.8:16522901 chr08:016522901 0 W/16522901-16522901 FN-307 Single Base Substitution A-G INTRON HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-328.SNP.8:16525369 chr08:016525369 0 W/16525369-16525369 FN-328 Single Base Substitution C-T INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2268-S.SNP.8:16532408 chr08:016532408 0 W/16532408-16532408 FN2268-S SNP T -> C AC=2;AN=190;BQB=0.435004;DP=4575;DP4=2121,2119,28,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.68278e-30;MQSB=0.195207;RPB=0.907982;SGB=130.923;VDB=0.805058;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.8:16562924 chr08:016562924 0 W/16562924-16562924 FN483-S Single Base Substitution C-A INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1572-S.SNP.8:16567981 chr08:016567981 0 W/16567981-16567981 FN1572-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g27110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN859-S.SNP.8:16572838 chr08:016572838 0 W/16572838-16572838 FN859-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g27120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN494-S.SNP.8:16573057 chr08:016573057 0 W/16573057-16573057 FN494-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g27120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN4325-S.SNP.8:16575016 chr08:016575016 0 W/16575016-16575016 FN4325-S SNP C -> T AC=1;AN=170;BQB=0.869963;DP=2353;DP4=1148,1100,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=30;MQ0F=0.079048;MQB=0.365997;MQSB=0.0885151;RPB=0.868636;SGB=47.8722;VDB=0.703185;EFF=INTRON(MODIFIER||||340|LOC_Os08g27120|protein_coding|CODING|LOC_Os08g27120.1|2|1) FN545-S.SNP.8:16580381 chr08:016580381 0 W/16580381-16580381 FN545-S Single Base Substitution T-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN945-S.SNP.8:16580515 chr08:016580515 0 W/16580515-16580515 FN945-S Single Base Substitution A-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2562-S.SNP.8:16585240 chr08:016585240 0 W/16585240-16585240 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.6566;DP=4456;DP4=2444,1756,22,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000224417;MQB=4.43806e-20;MQSB=0.944256;RPB=0.581793;SGB=36.4664;VDB=0.10805;EFF=INTRON(MODIFIER||||741|LOC_Os08g27150|protein_coding|CODING|LOC_Os08g27150.1|1|1) FN2562-S.SNP.8:16585241 chr08:016585241 0 W/16585241-16585241 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.389945;DP=4474;DP4=2450,1764,21,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.24077e-20;MQSB=0.835788;RPB=0.483841;SGB=76.0565;VDB=0.127711;EFF=INTRON(MODIFIER||||741|LOC_Os08g27150|protein_coding|CODING|LOC_Os08g27150.1|1|1) FN2562-S.SNP.8:16585242 chr08:016585242 0 W/16585242-16585242 FN2562-S SNP A -> G AC=1;AN=198;BQB=0.889732;DP=4475;DP4=2521,1783,21,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19395e-21;MQSB=0.923256;RPB=0.517922;SGB=76.0565;VDB=0.171549;EFF=INTRON(MODIFIER||||741|LOC_Os08g27150|protein_coding|CODING|LOC_Os08g27150.1|1|1) FN2701-S.SNP.8:16590384 chr08:016590384 0 W/16590384-16590384 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.33466;DP=4917;DP4=2401,2243,21,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.81766e-12;MQSB=0.140751;RPB=0.463449;SGB=33.5675;VDB=0.533718;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.8:16595179 chr08:016595179 0 W/16595179-16595179 FN1573-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN713-S.SNP.8:16595349 chr08:016595349 0 W/16595349-16595349 FN713-S Single Base Substitution C-T INTRON HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2542-S.SNP.8:16597882 chr08:016597882 0 W/16597882-16597882 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.837602;DP=4423;DP4=1880,2375,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0888537;MQB=0.932524;MQSB=0.918696;RPB=0.528022;SGB=31.1689;VDB=0.177545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G91D|1259|LOC_Os08g27180|protein_coding|CODING|LOC_Os08g27180.1|2|1) FN-167.SNP.8:16603022 chr08:016603022 0 W/16603022-16603022 FN-167 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN671-S.SNP.8:16609194 chr08:016609194 0 W/16609194-16609194 FN671-S Single Base Substitution T-G INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN801-S.SNP.8:16611104 chr08:016611104 0 W/16611104-16611104 FN801-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g27190 OsFBX288 - F-box domain containing protein, expressed SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN2588-S.SNP.8:16613971 chr08:016613971 0 W/16613971-16613971 FN2588-S SNP G -> T AC=1;AN=198;BQB=0.977753;DP=4249;DP4=2245,1821,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=9.03637e-07;MQSB=0.15955;RPB=0.958904;SGB=26.7492;VDB=0.39115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.8:16614930 chr08:016614930 0 W/16614930-16614930 FN3551-S SNP T -> A AC=1;AN=188;BQB=0.0710412;DP=3004;DP4=1492,1426,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0;MQB=0.00452711;MQSB=0.287842;RPB=0.325032;SGB=50.1574;VDB=0.441382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.8:16616804 chr08:016616804 0 W/16616804-16616804 FN1624-S Single Base Substitution C-T INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1624-S.SNP.8:16616805 chr08:016616805 0 W/16616805-16616805 FN1624-S Single Base Substitution C-T INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2340.SNP.8:16616858 chr08:016616858 0 W/16616858-16616858 FN2340 SNP C -> A AC=1;AN=192;BQB=0.615069;DP=4290;DP4=2123,1914,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.27157e-10;MQSB=0.411726;RPB=0.920105;SGB=15.1765;VDB=0.208539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H22N|126|LOC_Os08g27200|protein_coding|CODING|LOC_Os08g27200.1|2|1) FN1662-S.SNP.8:16622839 chr08:016622839 0 W/16622839-16622839 FN1662-S Single Base Substitution A-T INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2563-S.SNP.8:16622839 chr08:016622839 0 W/16622839-16622839 FN2563-S SNP A -> T AC=2;AN=198;BQB=0.768903;DP=3804;DP4=1872,1718,9,12;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=0.00034003;MQSB=0.00970282;RPB=0.923152;SGB=-11.4553;VDB=0.550435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.8:16625001 chr08:016625001 0 W/16625001-16625001 FN1240-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2281.SNP.8:16635567 chr08:016635567 0 W/16635567-16635567 FN2281 SNP T -> A AC=1;AN=192;BQB=0.886714;DP=1846;DP4=717,753,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=0.00040848;MQSB=0.0101677;RPB=0.758279;SGB=-3.59558;VDB=0.111988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.8:16639662 chr08:016639662 0 W/16639662-16639662 FN3916-S SNP A -> G AC=1;AN=158;BQB=0.921783;DP=1341;DP4=1095,205,4,2;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.00604848;MQSB=1.03265e-08;RPB=0.768729;SGB=20.8534;VDB=0.859996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.8:16646364 chr08:016646364 0 W/16646364-16646364 FN2373 SNP G -> A AC=1;AN=192;BQB=0.373084;DP=5188;DP4=2577,2267,19,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=2.24623e-20;MQSB=0.948902;RPB=0.953765;SGB=100.374;VDB=0.395094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.8:16646365 chr08:016646365 0 W/16646365-16646365 FN2373 SNP A -> G AC=1;AN=192;BQB=0.15084;DP=5216;DP4=2647,2255,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.28321e-18;MQSB=0.635875;RPB=0.993948;SGB=140.497;VDB=0.369566;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.8:16647485 chr08:016647485 0 W/16647485-16647485 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.987255;DP=2524;DP4=1220,1253,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.000681772;MQSB=0.260859;RPB=0.716145;SGB=30.8063;VDB=0.761142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.8:16662159 chr08:016662159 0 W/16662159-16662159 FN2215-S SNP C -> T AC=1;AN=190;BQB=0.255236;DP=4991;DP4=2388,2245,25,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06444e-15;MQSB=0.98525;RPB=0.819128;SGB=-86.3494;VDB=0.783745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D397N|500|LOC_Os08g27290|protein_coding|CODING|LOC_Os08g27290.1|5|1) FN2484.SNP.8:16665167 chr08:016665167 0 W/16665167-16665167 FN2484 SNP A -> G AC=1;AN=200;BQB=0.860257;DP=4223;DP4=2333,1446,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.56978e-09;MQSB=0.156548;RPB=0.299559;SGB=15.9106;VDB=0.152095;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.8:16667029 chr08:016667029 0 W/16667029-16667029 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN4154-S.SNP.8:16674091 chr08:016674091 0 W/16674091-16674091 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.904532;DP=2457;DP4=1176,1198,9,11;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0;MQB=2.10151e-07;MQSB=0.958084;RPB=0.891689;SGB=58.9766;VDB=0.345226;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D401|683|LOC_Os08g27300|protein_coding|CODING|LOC_Os08g27300.1|3|1) FN3416-S.SNP.8:16677787 chr08:016677787 0 W/16677787-16677787 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.970664;DP=1756;DP4=1056,666,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0290433;MQB=0.94848;MQSB=0.983266;RPB=0.964411;SGB=30.6558;VDB=0.836076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A58V|501|LOC_Os08g27310|protein_coding|CODING|LOC_Os08g27310.1|1|1) FN-348.SNP.8:16684199 chr08:016684199 0 W/16684199-16684199 FN-348 Single Base Substitution A-G INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1217-S.SNP.8:16705853 chr08:016705853 0 W/16705853-16705853 FN1217-S Single Base Substitution A-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2618-S.SNP.8:16739552 chr08:016739552 0 W/16739552-16739552 FN2618-S SNP A -> G AC=1;AN=186;BQB=0.999997;DP=3888;DP4=1786,1916,10,15;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=4.14212e-15;MQSB=0.953009;RPB=0.859294;SGB=79.6954;VDB=0.125423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.8:16741015 chr08:016741015 0 W/16741015-16741015 FN2554-S SNP G -> A AC=1;AN=188;BQB=0.742167;DP=3844;DP4=1746,1927,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.89282e-09;MQSB=0.918724;RPB=0.44015;SGB=90.9049;VDB=0.105767;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.8:16743012 chr08:016743012 0 W/16743012-16743012 FN1538-S Single Base Substitution T-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2600-S.SNP.8:16743012 chr08:016743012 0 W/16743012-16743012 FN2600-S SNP T -> A AC=1;AN=186;BQB=0.685316;DP=3456;DP4=1472,1788,9,11;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0;MQB=3.63237e-07;MQSB=0.115134;RPB=0.349219;SGB=37.1297;VDB=0.633915;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:16743012 chr08:016743012 0 W/16743012-16743012 FN3696-S SNP T -> A AC=1;AN=190;BQB=0.431394;DP=2512;DP4=1198,1089,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00841641;MQSB=0.0136562;RPB=0.498943;SGB=-33.6477;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.8:16743012 chr08:016743012 0 W/16743012-16743012 FN4163-S SNP T -> A AC=2;AN=170;BQB=0.659149;DP=2433;DP4=1018,1237,8,15;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.28406e-06;MQSB=0.263059;RPB=0.817566;SGB=96.7413;VDB=0.110961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.8:16743782 chr08:016743782 0 W/16743782-16743782 FN3532-S SNP G -> A AC=1;AN=188;BQB=0.999572;DP=3215;DP4=1688,1431,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0416e-12;MQSB=0.949515;RPB=0.895648;SGB=94.4119;VDB=0.881017;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.8:16750277 chr08:016750277 0 W/16750277-16750277 FN4106-S SNP T -> C AC=2;AN=182;BQB=0.792375;DP=2885;DP4=1300,1421,11,15;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0;MQB=1.96238e-13;MQSB=0.640462;RPB=0.62845;SGB=50.7635;VDB=0.203029;EFF=INTRON(MODIFIER||||256|LOC_Os08g27440|protein_coding|CODING|LOC_Os08g27440.1|1|1) FN_786-4-1.SNP.8:16752162 chr08:016752162 0 W/16752162-16752162 FN_786-4-1 Single Base Substitution T-C HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN_770-6-1.SNP.8:16753428 chr08:016753428 0 W/16753428-16753428 FN_770-6-1 Single Base Substitution G-C Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN-310.SNP.8:16753794 chr08:016753794 0 W/16753794-16753794 FN-310 Single Base Substitution C-A INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-28.SNP.8:16754396 chr08:016754396 0 W/16754396-16754396 FN-28 Single Base Substitution G-A INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN1382-S.SNP.8:16754768 chr08:016754768 0 W/16754768-16754768 FN1382-S Single Base Substitution G-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN821-S.SNP.8:16756699 chr08:016756699 0 W/16756699-16756699 FN821-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN-14.SNP.8:16761388 chr08:016761388 0 W/16761388-16761388 FN-14 Single Base Substitution T-C INTRON Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1227-S.SNP.8:16766788 chr08:016766788 0 W/16766788-16766788 FN1227-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2316.SNP.8:16769101 chr08:016769101 0 W/16769101-16769101 FN2316 SNP T -> C AC=2;AN=192;BQB=0.287334;DP=3517;DP4=1639,1398,22,14;HOB=0.0206163;ICB=0.494846;MQ=27;MQ0F=0;MQB=6.63287e-09;MQSB=0.339664;RPB=0.424225;SGB=77.6365;VDB=0.0305423;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.8:16784705 chr08:016784705 0 W/16784705-16784705 FN1247-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g27500 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN1247-S.SNP.8:16784960 chr08:016784960 0 W/16784960-16784960 FN1247-S Single Base Substitution T-A INTRON HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN3909-S.SNP.8:16785510 chr08:016785510 0 W/16785510-16785510 FN3909-S SNP C -> T AC=2;AN=158;BQB=0.866622;DP=1629;DP4=1352,202,15,4;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=7.16511e-06;MQSB=1.08963e-08;RPB=0.230794;SGB=77.6532;VDB=0.295542;EFF=INTRON(MODIFIER||||255|LOC_Os08g27500|protein_coding|CODING|LOC_Os08g27500.1|1|1) FN3287-S.SNP.8:16793210 chr08:016793210 0 W/16793210-16793210 FN3287-S SNP G -> A AC=1;AN=182;BQB=0.968993;DP=3603;DP4=1699,1813,12,11;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0;MQB=0.00153996;MQSB=0.179151;RPB=0.184306;SGB=70.9657;VDB=0.0933776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.8:16795827 chr08:016795827 0 W/16795827-16795827 FN3630-S SNP T -> A AC=2;AN=190;BQB=0.937393;DP=2932;DP4=1212,1524,7,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.08246e-10;MQSB=0.752248;RPB=0.685804;SGB=36.4291;VDB=0.0171867;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K279N|744|LOC_Os08g27530|protein_coding|CODING|LOC_Os08g27530.1|2|1) FN462-S.SNP.8:16800433 chr08:016800433 0 W/16800433-16800433 FN462-S Single Base Substitution T-A INTRON HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN3529-S.SNP.8:16801453 chr08:016801453 0 W/16801453-16801453 FN3529-S SNP A -> G AC=1;AN=188;BQB=0.784401;DP=3218;DP4=1653,1401,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0;MQB=5.97025e-05;MQSB=0.00537954;RPB=0.363879;SGB=39.5276;VDB=0.255247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.8:16803230 chr08:016803230 0 W/16803230-16803230 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.69927;DP=4945;DP4=1972,2570,22,19;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.14469e-12;MQSB=0.242692;RPB=0.998767;SGB=-46.5853;VDB=0.621199;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.8:16804135 chr08:016804135 0 W/16804135-16804135 FN-231 Single Base Substitution G-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-178.SNP.8:16808461 chr08:016808461 0 W/16808461-16808461 FN-178 Single Base Substitution G-T INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3390-S.SNP.8:16825359 chr08:016825359 0 W/16825359-16825359 FN3390-S SNP A -> T AC=1;AN=182;BQB=0.961461;DP=2797;DP4=1371,1311,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=3.78166e-05;MQSB=0.221346;RPB=0.729672;SGB=66.8296;VDB=0.816927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.8:16832230 chr08:016832230 0 W/16832230-16832230 FN1257-S Single Base Substitution C-A INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2222-S.SNP.8:16832612 chr08:016832612 0 W/16832612-16832612 FN2222-S SNP G -> C AC=2;AN=190;BQB=0.999225;DP=4911;DP4=2203,2392,18,28;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=7.07837e-16;MQSB=0.331946;RPB=0.774278;SGB=203.927;VDB=0.791027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.8:16833842 chr08:016833842 0 W/16833842-16833842 FN2337 SNP G -> A AC=1;AN=192;BQB=0.754758;DP=4444;DP4=2270,1899,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=2.00888e-05;MQSB=0.282338;RPB=0.948366;SGB=-9.68954;VDB=0.832527;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.8:16833971 chr08:016833971 0 W/16833971-16833971 FN454-S Single Base Substitution A-C INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN2677-S.SNP.8:16839010 chr08:016839010 0 W/16839010-16839010 FN2677-S SNP G -> T AC=1;AN=200;BQB=0.913732;DP=4637;DP4=2226,2152,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.70326e-11;MQSB=0.974453;RPB=0.984664;SGB=72.6852;VDB=0.102579;EFF=INTRON(MODIFIER||||490|LOC_Os08g27630|protein_coding|CODING|LOC_Os08g27630.1|1|1) FN2541-S.SNP.8:16858646 chr08:016858646 0 W/16858646-16858646 FN2541-S SNP C -> T AC=1;AN=188;BQB=0.931791;DP=3204;DP4=1640,1332,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=8.51637e-07;MQSB=0.000813138;RPB=0.0915638;SGB=54.144;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.8:16863266 chr08:016863266 0 W/16863266-16863266 FN2435 SNP C -> T AC=1;AN=200;BQB=0.929012;DP=4983;DP4=2467,2223,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38467e-09;MQSB=0.999194;RPB=0.80333;SGB=47.4799;VDB=0.505421;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.8:16864676 chr08:016864676 0 W/16864676-16864676 FN3305-S SNP G -> C AC=1;AN=182;BQB=0.876863;DP=3128;DP4=1427,1585,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000959079;MQB=1.19721e-08;MQSB=0.876225;RPB=0.589885;SGB=46.3132;VDB=0.234292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A614G|989|LOC_Os08g27674|protein_coding|CODING|LOC_Os08g27674.1|6|1) FN3981-S.SNP.8:16873534 chr08:016873534 0 W/16873534-16873534 FN3981-S SNP T -> G AC=1;AN=168;BQB=0.996003;DP=3218;DP4=1411,1690,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.17862e-09;MQSB=0.950102;RPB=0.628569;SGB=38.1788;VDB=0.616855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.8:16873914 chr08:016873914 0 W/16873914-16873914 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.741402;DP=2962;DP4=1465,1407,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.53382e-10;MQSB=0.988872;RPB=0.748021;SGB=25.7969;VDB=0.168442;EFF=INTRON(MODIFIER||||220|LOC_Os08g27700|protein_coding|CODING|LOC_Os08g27700.1|2|1) W276-2-1.SNP.8:16879501 chr08:016879501 0 W/16879501-16879501 W276-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2530-S.SNP.8:16888952 chr08:016888952 0 W/16888952-16888952 FN2530-S SNP T -> G AC=1;AN=198;BQB=0.881574;DP=4316;DP4=2073,2006,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0;MQB=8.59591e-05;MQSB=0.00125384;RPB=0.76649;SGB=29.3443;VDB=0.783324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.8:16890726 chr08:016890726 0 W/16890726-16890726 FN2157-S SNP T -> A AC=1;AN=168;BQB=0.00563815;DP=4212;DP4=2237,1933,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.62844e-08;MQSB=0.965839;RPB=0.992738;SGB=-133.625;VDB=0.566431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.8:16891724 chr08:016891724 0 W/16891724-16891724 FN3730-S SNP G -> A AC=2;AN=190;BQB=0.998077;DP=2771;DP4=1176,1482,8,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.14591e-15;MQSB=0.940679;RPB=0.611588;SGB=82.301;VDB=0.285099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.8:16895868 chr08:016895868 0 W/16895868-16895868 FN3875-S SNP G -> A AC=1;AN=158;BQB=0.868818;DP=2677;DP4=1120,1451,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.8359e-09;MQSB=0.94715;RPB=0.885342;SGB=37.4429;VDB=0.847865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G256S|352|LOC_Os08g27720|protein_coding|CODING|LOC_Os08g27720.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G255S|351|LOC_Os08g27720|protein_coding|CODING|LOC_Os08g27720.2|7|1) FN-79.SNP.8:16903387 chr08:016903387 0 W/16903387-16903387 FN-79 Single Base Substitution C-G INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN3859-S.SNP.8:16906244 chr08:016906244 0 W/16906244-16906244 FN3859-S SNP A -> G AC=2;AN=158;BQB=0.975424;DP=2637;DP4=1284,1169,16,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.9543e-15;MQSB=0.672682;RPB=0.381959;SGB=81.2457;VDB=0.441939;EFF=INTRON(MODIFIER||||833|LOC_Os08g27740|protein_coding|CODING|LOC_Os08g27740.1|1|1) FN2360.SNP.8:16917723 chr08:016917723 0 W/16917723-16917723 FN2360 SNP G -> T AC=1;AN=192;BQB=0.809955;DP=5221;DP4=2628,2306,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.12026e-09;MQSB=0.589381;RPB=0.952171;SGB=61.1661;VDB=0.88451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.8:16923516 chr08:016923516 0 W/16923516-16923516 FN3982-S SNP A -> G AC=1;AN=168;BQB=0.961932;DP=2355;DP4=1467,788,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0713376;MQB=0.557606;MQSB=0.080774;RPB=0.615528;SGB=17.5943;VDB=0.461975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.8:16926185 chr08:016926185 0 W/16926185-16926185 FN1062-S Single Base Substitution T-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1548-S.SNP.8:16927514 chr08:016927514 0 W/16927514-16927514 FN1548-S SNP T -> C AC=2;AN=188;BQB=0.973755;DP=1908;DP4=951,900,12,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.50542e-14;MQSB=0.909722;RPB=0.521396;SGB=59.139;VDB=0.257232;EFF=START_LOST(HIGH|MISSENSE|aTg/aCg|M1T|641|LOC_Os08g27790|protein_coding|CODING|LOC_Os08g27790.1|1|1);LOF=(LOC_Os08g27790|LOC_Os08g27790|1|1.00) FN1392-S.SNP.8:16927927 chr08:016927927 0 W/16927927-16927927 FN1392-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g27790 retrotransposon protein, putative, unclassified, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3301-S.SNP.8:16928364 chr08:016928364 0 W/16928364-16928364 FN3301-S SNP C -> G AC=1;AN=184;BQB=0.972745;DP=3828;DP4=1749,1965,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.97559e-09;MQSB=0.917149;RPB=0.966123;SGB=25.7969;VDB=0.923849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P229R|641|LOC_Os08g27790|protein_coding|CODING|LOC_Os08g27790.1|2|1) FN4036-S.SNP.8:16934887 chr08:016934887 0 W/16934887-16934887 FN4036-S SNP A -> C AC=1;AN=168;BQB=0.910708;DP=1394;DP4=414,846,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0157819;MQB=0.000607781;MQSB=2.94444e-10;RPB=0.671986;SGB=-36.659;VDB=0.000219708;EFF=INTRON(MODIFIER||||1397|LOC_Os08g27800|protein_coding|CODING|LOC_Os08g27800.1|2|1) FN-121.SNP.8:16935086 chr08:016935086 0 W/16935086-16935086 FN-121 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g27800 retrotransposon protein, putative, unclassified, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3393-S.SNP.8:16944443 chr08:016944443 0 W/16944443-16944443 FN3393-S SNP C -> T AC=2;AN=184;BQB=0.152346;DP=2701;DP4=1199,1366,16,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.66287e-12;MQSB=0.9625;RPB=0.846884;SGB=68.6673;VDB=0.939117;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.8:16950023 chr08:016950023 0 W/16950023-16950023 FN-73 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g27824 NOL1/NOP2/sun family protein, putative, expressed SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1231-S.SNP.8:16951323 chr08:016951323 0 W/16951323-16951323 FN1231-S Single Base Substitution C-T INTRON HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN806-S.SNP.8:16954967 chr08:016954967 0 W/16954967-16954967 FN806-S Single Base Substitution A-C INTRON HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN4234-S.SNP.8:16960354 chr08:016960354 0 W/16960354-16960354 FN4234-S SNP T -> C AC=1;AN=170;BQB=0.983204;DP=2065;DP4=1022,975,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.00982e-07;MQSB=0.996949;RPB=0.941615;SGB=56.7575;VDB=0.5863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1741-S.SNP.8:16976001 chr08:016976001 0 W/16976001-16976001 FN1741-S SNP A -> T AC=2;AN=188;BQB=0.974255;DP=3415;DP4=1740,1613,24,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.6472e-29;MQSB=0.853837;RPB=0.903804;SGB=56.4669;VDB=0.368938;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.8:16980474 chr08:016980474 0 W/16980474-16980474 FN715-S Single Base Substitution G-T INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1202-S.SNP.8:16985854 chr08:016985854 0 W/16985854-16985854 FN1202-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. W463-2-1.SNP.8:16988827 chr08:016988827 0 W/16988827-16988827 W463-2-1 Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2704-S.SNP.8:16989257 chr08:016989257 0 W/16989257-16989257 FN2704-S SNP G -> A AC=1;AN=200;BQB=0.427907;DP=5184;DP4=2364,2533,18,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.76342e-18;MQSB=0.906639;RPB=0.577764;SGB=68.5625;VDB=0.920318;EFF=INTRON(MODIFIER||||144|LOC_Os08g27860|protein_coding|CODING|LOC_Os08g27860.1|1|1) FN2475.SNP.8:16993877 chr08:016993877 0 W/16993877-16993877 FN2475 SNP G -> A AC=1;AN=200;BQB=0.107813;DP=4839;DP4=2209,2357,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.95882e-08;MQSB=0.991716;RPB=0.962967;SGB=-13.1102;VDB=0.880155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.8:16998793 chr08:016998793 0 W/16998793-16998793 FN1639-S Single Base Substitution G-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3913-S.SNP.8:17002407 chr08:017002407 0 W/17002407-17002407 FN3913-S SNP G -> A AC=1;AN=158;BQB=0.910012;DP=2268;DP4=1201,998,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.000440917;MQB=0.000169954;MQSB=0.984086;RPB=0.723495;SGB=55.806;VDB=0.900985;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P92|261|LOC_Os08g27890|protein_coding|CODING|LOC_Os08g27890.1|2|1) FN2711-S.SNP.8:17004164 chr08:017004164 0 W/17004164-17004164 FN2711-S SNP C -> T AC=2;AN=200;BQB=0.996617;DP=4460;DP4=1918,2271,9,10;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.0123318;MQB=4.53017e-09;MQSB=0.000352152;RPB=0.892249;SGB=81.8956;VDB=0.162612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.8:17004165 chr08:017004165 0 W/17004165-17004165 FN2711-S SNP C -> T AC=2;AN=200;BQB=0.447324;DP=4462;DP4=1908,2250,9,13;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.0121022;MQB=1.53324e-10;MQSB=5.12726e-05;RPB=0.587414;SGB=42.5108;VDB=0.280929;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.8:17004818 chr08:017004818 0 W/17004818-17004818 FN661-S Single Base Substitution C-A INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN3432-S.SNP.8:17005227 chr08:017005227 0 W/17005227-17005227 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.803934;DP=3233;DP4=1542,1605,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0470152;MQB=0.936278;MQSB=0.962995;RPB=0.994279;SGB=89.4385;VDB=0.81621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P23S|1209|LOC_Os08g27900|protein_coding|CODING|LOC_Os08g27900.1|1|1) FN2551-S.SNP.8:17018187 chr08:017018187 0 W/17018187-17018187 FN2551-S SNP T -> A AC=1;AN=194;BQB=0.994642;DP=3948;DP4=1859,1742,18,8;HOB=5.31406e-05;ICB=0.000106829;MQ=48;MQ0F=0;MQB=9.71365e-11;MQSB=0.427536;RPB=0.591356;SGB=22.1104;VDB=0.403454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.8:17022176 chr08:017022176 0 W/17022176-17022176 FN2460 SNP T -> C AC=1;AN=200;BQB=0.912066;DP=6573;DP4=2498,3547,23,13;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0722653;MQB=0.104998;MQSB=1.64839e-19;RPB=0.495183;SGB=38.383;VDB=0.741644;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R195|350|LOC_Os08g27920|protein_coding|CODING|LOC_Os08g27920.1|2|1) FN1421-S.SNP.8:17026009 chr08:017026009 0 W/17026009-17026009 FN1421-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g27930 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN-164.SNP.8:17030351 chr08:017030351 0 W/17030351-17030351 FN-164 Single Base Substitution G-A INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN999-S.SNP.8:17031492 chr08:017031492 0 W/17031492-17031492 FN999-S Single Base Substitution T-C INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3830-S.SNP.8:17032819 chr08:017032819 0 W/17032819-17032819 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.750349;DP=2562;DP4=1072,1421,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52063e-06;MQSB=0.972095;RPB=0.901647;SGB=58.2031;VDB=0.710422;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.8:17037741 chr08:017037741 0 W/17037741-17037741 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.795122;DP=2087;DP4=1086,913,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=5.38446e-07;MQSB=0.209388;RPB=0.989848;SGB=47.8722;VDB=0.246406;EFF=INTRON(MODIFIER||||173|LOC_Os08g27970|protein_coding|CODING|LOC_Os08g27970.1|1|1) FN4204-S.SNP.8:17037742 chr08:017037742 0 W/17037742-17037742 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.859696;DP=2078;DP4=1085,909,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=5.25772e-07;MQSB=0.22512;RPB=0.994865;SGB=47.8722;VDB=0.236947;EFF=INTRON(MODIFIER||||173|LOC_Os08g27970|protein_coding|CODING|LOC_Os08g27970.1|1|1) FN2431.SNP.8:17038759 chr08:017038759 0 W/17038759-17038759 FN2431 SNP C -> G AC=1;AN=200;BQB=0.519647;DP=4995;DP4=2389,2341,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.76298e-06;MQSB=0.798322;RPB=0.0498403;SGB=40.2696;VDB=0.185218;EFF=INTRON(MODIFIER||||173|LOC_Os08g27970|protein_coding|CODING|LOC_Os08g27970.1|2|1) FN498-S.SNP.8:17040664 chr08:017040664 0 W/17040664-17040664 FN498-S Single Base Substitution T-A INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2560-S.SNP.8:17040704 chr08:017040704 0 W/17040704-17040704 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.0253374;DP=4022;DP4=1724,1969,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.13043e-07;MQSB=0.960384;RPB=0.629198;SGB=-57.0159;VDB=0.466821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.8:17041371 chr08:017041371 0 W/17041371-17041371 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.920763;DP=2618;DP4=1367,1148,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.80174e-10;MQSB=0.993105;RPB=0.622944;SGB=64.5449;VDB=0.13063;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.8:17041758 chr08:017041758 0 W/17041758-17041758 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.833055;DP=3087;DP4=1223,1773,9,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.3293e-15;MQSB=0.996437;RPB=0.994823;SGB=107.526;VDB=0.354645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3445-S.SNP.8:17042013 chr08:017042013 0 W/17042013-17042013 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.980291;DP=3492;DP4=1818,1549,40,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0214777;MQB=3.91886e-19;MQSB=1.3968e-13;RPB=0.170103;SGB=-1019.47;VDB=0.00189805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.8:17044124 chr08:017044124 0 W/17044124-17044124 FN2707-S SNP G -> A AC=1;AN=200;BQB=0.725724;DP=3806;DP4=1758,1796,1,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00289017;MQB=9.5621e-05;MQSB=0.0447872;RPB=0.676392;SGB=16.4591;VDB=0.36862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.8:17046950 chr08:017046950 0 W/17046950-17046950 FN3662-S SNP T -> G AC=1;AN=190;BQB=0.552823;DP=4788;DP4=2381,2186,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00229741;MQB=1.93181e-07;MQSB=2.39154e-07;RPB=0.995111;SGB=-39.4473;VDB=0.322476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.8:17052512 chr08:017052512 0 W/17052512-17052512 FN2713-S SNP G -> T AC=2;AN=200;BQB=0.999896;DP=4754;DP4=2337,1826,28,16;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00652082;MQB=0.000131536;MQSB=0;RPB=0.667168;SGB=148.425;VDB=0.977032;EFF=INTRON(MODIFIER||||1061|LOC_Os08g27980|protein_coding|CODING|LOC_Os08g27980.1|3|1) FN3363-S.SNP.8:17058634 chr08:017058634 0 W/17058634-17058634 FN3363-S SNP G -> T AC=1;AN=184;BQB=0.992857;DP=4644;DP4=2810,1582,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00430663;MQB=0.0169524;MQSB=1.23314e-42;RPB=0.565938;SGB=39.2697;VDB=0.285528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.8:17063860 chr08:017063860 0 W/17063860-17063860 FN2729-S SNP G -> T AC=1;AN=200;BQB=0.984371;DP=8165;DP4=3520,4318,12,9;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0729945;MQB=0.871447;MQSB=4.06454e-27;RPB=0.455936;SGB=14.3054;VDB=0.559558;EFF=INTRON(MODIFIER||||741|LOC_Os08g28010|protein_coding|CODING|LOC_Os08g28010.1|10|1) FN2381.SNP.8:17072143 chr08:017072143 0 W/17072143-17072143 FN2381 SNP T -> C AC=1;AN=192;BQB=0.999808;DP=4860;DP4=2403,2197,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.19547e-13;MQSB=0.700297;RPB=0.520267;SGB=49.4287;VDB=0.11062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.8:17073697 chr08:017073697 0 W/17073697-17073697 FN2120-S SNP C -> A AC=2;AN=168;BQB=0.607435;DP=3385;DP4=1721,1596,25,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.37348e-27;MQSB=0.23249;RPB=0.587202;SGB=57.1309;VDB=0.123733;EFF=INTERGENIC(MODIFIER||||||||||1) FN4036-S.SNP.8:17076997 chr08:017076997 0 W/17076997-17076997 FN4036-S SNP G -> C AC=1;AN=168;BQB=0.922538;DP=2869;DP4=1252,1514,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.99004e-06;MQSB=0.960536;RPB=0.035888;SGB=52.1728;VDB=0.431098;EFF=UTR_5_PRIME(MODIFIER||437||112|LOC_Os08g28030|protein_coding|CODING|LOC_Os08g28030.1|1|1) FN486-S.SNP.8:17081579 chr08:017081579 0 W/17081579-17081579 FN486-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g28040 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2708-S.SNP.8:17085853 chr08:017085853 0 W/17085853-17085853 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.445446;DP=4981;DP4=2386,2352,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34382e-11;MQSB=0.998632;RPB=0.90912;SGB=58.2954;VDB=0.706119;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.8:17086093 chr08:017086093 0 W/17086093-17086093 FN447-S Single Base Substitution C-G INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2205-S.SNP.8:17087848 chr08:017087848 0 W/17087848-17087848 FN2205-S SNP T -> A AC=1;AN=190;BQB=0.408394;DP=5388;DP4=2668,2342,15,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.54695e-19;MQSB=0.999787;RPB=0.614647;SGB=77.2911;VDB=0.0447318;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.8:17094992 chr08:017094992 0 W/17094992-17094992 FN2648-S SNP G -> A AC=2;AN=200;BQB=0.079579;DP=3855;DP4=1716,1872,19,13;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0744488;MQB=0.990634;MQSB=6.80263e-31;RPB=0.803275;SGB=105.163;VDB=0.877355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.8:17095192 chr08:017095192 0 W/17095192-17095192 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.989378;DP=2954;DP4=1416,1448,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.64919e-09;MQSB=0.189664;RPB=0.646107;SGB=93.9603;VDB=0.931709;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.8:17097732 chr08:017097732 0 W/17097732-17097732 FN1520-S Single Base Substitution G-A INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1520-S.SNP.8:17097733 chr08:017097733 0 W/17097733-17097733 FN1520-S Single Base Substitution C-A INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN4148-S.SNP.8:17100498 chr08:017100498 0 W/17100498-17100498 FN4148-S SNP C -> A AC=1;AN=170;BQB=0.998859;DP=2146;DP4=1011,1065,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.07301e-08;MQSB=0.792643;RPB=0.99158;SGB=65.6427;VDB=0.31234;EFF=INTERGENIC(MODIFIER||||||||||1) FN-396.SNP.8:17102651 chr08:017102651 0 W/17102651-17102651 FN-396 Single Base Substitution G-A INTRON HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2352.SNP.8:17107235 chr08:017107235 0 W/17107235-17107235 FN2352 SNP A -> C AC=2;AN=192;BQB=0.974873;DP=5425;DP4=2474,2600,26,23;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.0108756;MQB=1.95376e-15;MQSB=2.2344e-27;RPB=0.988785;SGB=3.85482;VDB=0.603947;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Gcg|S22A|803|LOC_Os08g28060|protein_coding|CODING|LOC_Os08g28060.1|1|1) FN1698-S.SNP.8:17109559 chr08:017109559 0 W/17109559-17109559 FN1698-S SNP A -> G AC=1;AN=188;BQB=0.328397;DP=3888;DP4=1821,2035,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64057e-06;MQSB=0.735459;RPB=0.111443;SGB=-15.5431;VDB=0.666374;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.8:17113442 chr08:017113442 0 W/17113442-17113442 FN934-S Single Base Substitution A-C INTRON HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1247-S.SNP.8:17117827 chr08:017117827 0 W/17117827-17117827 FN1247-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN354-S.SNP.8:17119030 chr08:017119030 0 W/17119030-17119030 FN354-S Single Base Substitution G-A INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN4224-S.SNP.8:17124184 chr08:017124184 0 W/17124184-17124184 FN4224-S SNP G -> C AC=1;AN=170;BQB=0.98601;DP=2708;DP4=1260,1362,12,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.85337e-10;MQSB=0.966341;RPB=0.241818;SGB=29.6545;VDB=0.098785;EFF=INTRON(MODIFIER||||837|LOC_Os08g28080|protein_coding|CODING|LOC_Os08g28080.1|10|1) FN2725-S.SNP.8:17128570 chr08:017128570 0 W/17128570-17128570 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.852313;DP=5184;DP4=2394,2578,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82379e-12;MQSB=0.998236;RPB=0.845376;SGB=81.8956;VDB=0.674415;EFF=INTRON(MODIFIER||||837|LOC_Os08g28080|protein_coding|CODING|LOC_Os08g28080.1|5|1) FN3818-S.SNP.8:17129816 chr08:017129816 0 W/17129816-17129816 FN3818-S SNP A -> T AC=1;AN=190;BQB=0.880248;DP=2447;DP4=1324,1027,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.93619e-10;MQSB=0.980058;RPB=0.722363;SGB=80.9724;VDB=0.0582039;EFF=INTRON(MODIFIER||||837|LOC_Os08g28080|protein_coding|CODING|LOC_Os08g28080.1|4|1) FN3432-S.SNP.8:17131615 chr08:017131615 0 W/17131615-17131615 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.763584;DP=2964;DP4=1248,1621,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01768e-06;MQSB=0.994928;RPB=0.317958;SGB=48.7425;VDB=0.376267;EFF=INTRON(MODIFIER||||837|LOC_Os08g28080|protein_coding|CODING|LOC_Os08g28080.1|1|1) FN2088-S.SNP.8:17140573 chr08:017140573 0 W/17140573-17140573 FN2088-S SNP C -> T AC=1;AN=168;BQB=0.264359;DP=2606;DP4=1424,1132,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00460476;MQB=0.0211792;MQSB=3.90505e-06;RPB=0.850459;SGB=-1.53256;VDB=0.214686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.8:17142987 chr08:017142987 0 W/17142987-17142987 FN1528-S Single Base Substitution C-T INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3383-S.SNP.8:17152879 chr08:017152879 0 W/17152879-17152879 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.996608;DP=2663;DP4=1245,1347,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60468e-06;MQSB=0.0555588;RPB=0.893699;SGB=18.2315;VDB=0.787983;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T5I|112|LOC_Os08g28110|protein_coding|CODING|LOC_Os08g28110.1|1|1) FN4172-S.SNP.8:17154372 chr08:017154372 0 W/17154372-17154372 FN4172-S SNP C -> T AC=1;AN=170;BQB=0.987608;DP=2945;DP4=1257,1541,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.82426e-09;MQSB=0.918683;RPB=0.576735;SGB=29.6545;VDB=0.322143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.8:17155824 chr08:017155824 0 W/17155824-17155824 FN3632-S SNP T -> C AC=1;AN=190;BQB=0.892304;DP=3055;DP4=1525,1373,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000327332;MQB=1.45483e-11;MQSB=0.979186;RPB=0.517322;SGB=60.9777;VDB=0.162382;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.8:17156819 chr08:017156819 0 W/17156819-17156819 FN-153 Single Base Substitution C-T INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3864-S.SNP.8:17157657 chr08:017157657 0 W/17157657-17157657 FN3864-S SNP G -> C AC=2;AN=158;BQB=0.839341;DP=2629;DP4=941,1552,21,26;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.46228e-22;MQSB=0.985437;RPB=0.753907;SGB=148.635;VDB=0.657707;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.8:17158973 chr08:017158973 0 W/17158973-17158973 FN2174-S SNP T -> C AC=1;AN=168;BQB=0.00147479;DP=3257;DP4=1981,1234,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8024e-05;MQSB=0.986698;RPB=0.758899;SGB=-60.2222;VDB=0.993101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.8:17163211 chr08:017163211 0 W/17163211-17163211 FN3733-S SNP A -> C AC=1;AN=190;BQB=0.744559;DP=2965;DP4=1428,1304,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.39022e-08;MQSB=0.935399;RPB=0.618976;SGB=26.2136;VDB=0.742167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.8:17163550 chr08:017163550 0 W/17163550-17163550 FN3885-S SNP C -> T AC=2;AN=158;BQB=0.884203;DP=2530;DP4=1274,1133,23,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000395257;MQB=1.06208e-20;MQSB=0.757107;RPB=0.870456;SGB=173.781;VDB=0.599726;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.8:17163793 chr08:017163793 0 W/17163793-17163793 FN-129 Single Base Substitution G-C INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2301.SNP.8:17182350 chr08:017182350 0 W/17182350-17182350 FN2301 SNP C -> G AC=1;AN=192;BQB=0.318674;DP=4908;DP4=2442,2240,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.07017e-07;MQSB=0.977034;RPB=0.404073;SGB=-14.2043;VDB=0.928624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.8:17182927 chr08:017182927 0 W/17182927-17182927 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.861433;DP=3200;DP4=1827,1290,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.89469e-07;MQSB=0.879545;RPB=0.728434;SGB=32.2261;VDB=0.13933;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.8:17188529 chr08:017188529 0 W/17188529-17188529 FN3306-S SNP T -> A AC=1;AN=184;BQB=0.52859;DP=3155;DP4=1516,1482,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91511e-07;MQSB=0.907216;RPB=0.253183;SGB=3.75875;VDB=0.911024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F72I|100|LOC_Os08g28160|protein_coding|CODING|LOC_Os08g28160.1|4|1) FN3902-S.SNP.8:17195254 chr08:017195254 0 W/17195254-17195254 FN3902-S SNP A -> T AC=1;AN=158;BQB=0.221259;DP=2568;DP4=1140,1261,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00061947;MQSB=0.88974;RPB=0.506005;SGB=0.716704;VDB=0.846111;EFF=INTRON(MODIFIER||||333|LOC_Os08g28170|protein_coding|CODING|LOC_Os08g28170.1|7|1) FN2283.SNP.8:17195387 chr08:017195387 0 W/17195387-17195387 FN2283 SNP G -> A AC=1;AN=192;BQB=0.237179;DP=4811;DP4=2402,1925,19,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.3462e-16;MQSB=0.976789;RPB=0.0106146;SGB=-5.17475;VDB=0.803212;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L280|333|LOC_Os08g28170|protein_coding|CODING|LOC_Os08g28170.1|8|1) W246-5-1.SNP.8:17195809 chr08:017195809 0 W/17195809-17195809 W246-5-1 Single Base Substitution A-G UTR_3_PRIME HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3339-S.SNP.8:17197044 chr08:017197044 0 W/17197044-17197044 FN3339-S SNP T -> C AC=1;AN=184;BQB=0.980199;DP=2738;DP4=1374,1277,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.21333e-07;MQSB=0.955787;RPB=0.538662;SGB=39.699;VDB=0.108725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.8:17201778 chr08:017201778 0 W/17201778-17201778 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.75409;DP=4202;DP4=1891,2006,34,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.69003e-33;MQSB=0.998502;RPB=0.432254;SGB=191.771;VDB=0.683118;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G387D|511|LOC_Os08g28180|protein_coding|CODING|LOC_Os08g28180.1|2|1) FN-4.SNP.8:17213482 chr08:017213482 0 W/17213482-17213482 FN-4 Single Base Substitution A-G INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN2563-S.SNP.8:17215549 chr08:017215549 0 W/17215549-17215549 FN2563-S SNP T -> A AC=1;AN=198;BQB=0.869984;DP=4443;DP4=1996,2233,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68122e-07;MQSB=0.926135;RPB=0.338897;SGB=36.5539;VDB=0.498311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T418S|598|LOC_Os08g28214|protein_coding|CODING|LOC_Os08g28214.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T418S|598|LOC_Os08g28214|protein_coding|CODING|LOC_Os08g28214.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T270S|450|LOC_Os08g28214|protein_coding|CODING|LOC_Os08g28214.3|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T190S|370|LOC_Os08g28214|protein_coding|CODING|LOC_Os08g28214.4|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T190S|370|LOC_Os08g28214|protein_coding|CODING|LOC_Os08g28214.6|8|1) FN-410.SNP.8:17217649 chr08:017217649 0 W/17217649-17217649 FN-410 Single Base Substitution A-G INTRON HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN664-S.SNP.8:17224637 chr08:017224637 0 W/17224637-17224637 FN664-S Single Base Substitution G-T INTERGENIC HET SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN3738-S.SNP.8:17231744 chr08:017231744 0 W/17231744-17231744 FN3738-S SNP T -> A AC=1;AN=190;BQB=0.518256;DP=2989;DP4=1539,1333,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00033456;MQB=5.04674e-08;MQSB=0.742207;RPB=0.894251;SGB=39.6545;VDB=0.142558;EFF=INTRON(MODIFIER||||574|LOC_Os08g28240|protein_coding|CODING|LOC_Os08g28240.1|9|1) FN3738-S.SNP.8:17231745 chr08:017231745 0 W/17231745-17231745 FN3738-S SNP G -> A AC=1;AN=190;BQB=0.991332;DP=2976;DP4=1535,1345,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000336022;MQB=9.68618e-09;MQSB=0.775186;RPB=0.994962;SGB=36.1006;VDB=0.107775;EFF=INTRON(MODIFIER||||574|LOC_Os08g28240|protein_coding|CODING|LOC_Os08g28240.1|9|1) FN2329.SNP.8:17233393 chr08:017233393 0 W/17233393-17233393 FN2329 SNP G -> T AC=1;AN=192;BQB=0.495713;DP=5218;DP4=2605,2245,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000958222;MQB=0.0118024;MQSB=0.00846107;RPB=0.977407;SGB=-112.981;VDB=0.163557;EFF=INTRON(MODIFIER||||574|LOC_Os08g28240|protein_coding|CODING|LOC_Os08g28240.1|7|1) FN4153-S.SNP.8:17242088 chr08:017242088 0 W/17242088-17242088 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.686958;DP=2480;DP4=1141,1266,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.0147e-06;MQSB=0.992662;RPB=0.940054;SGB=56.7575;VDB=0.778595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.8:17242303 chr08:017242303 0 W/17242303-17242303 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.98272;DP=4642;DP4=2390,2024,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31217e-10;MQSB=0.790929;RPB=0.127865;SGB=61.9006;VDB=0.241952;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.8:17244160 chr08:017244160 0 W/17244160-17244160 FN4030-S SNP C -> T AC=1;AN=168;BQB=0.969673;DP=1484;DP4=469,908,1,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.21382e-06;MQSB=0.053227;RPB=0.42845;SGB=17.3231;VDB=0.325636;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.8:17247881 chr08:017247881 0 W/17247881-17247881 FN4100-S SNP C -> T AC=2;AN=182;BQB=0.962796;DP=3028;DP4=1566,1360,23,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.14384e-23;MQSB=0.627449;RPB=0.946594;SGB=197.481;VDB=0.383029;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D170|579|LOC_Os08g28260|protein_coding|CODING|LOC_Os08g28260.1|2|1) FN2701-S.SNP.8:17254044 chr08:017254044 0 W/17254044-17254044 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.738082;DP=5168;DP4=2591,2303,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36167e-18;MQSB=0.990496;RPB=0.999566;SGB=90.7419;VDB=0.246545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.8:17254045 chr08:017254045 0 W/17254045-17254045 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.957496;DP=5152;DP4=2568,2293,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.5118e-18;MQSB=0.994789;RPB=0.997797;SGB=31.9623;VDB=0.152148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.8:17254227 chr08:017254227 0 W/17254227-17254227 FN2554-S SNP A -> T AC=2;AN=198;BQB=0.169935;DP=4346;DP4=2029,2141,17,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.13639e-15;MQSB=0.686145;RPB=0.264354;SGB=159.832;VDB=0.473299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.8:17259784 chr08:017259784 0 W/17259784-17259784 FN2129-S SNP A -> T AC=1;AN=168;BQB=0.0358138;DP=4010;DP4=2067,1905,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.93837e-09;MQSB=0.980793;RPB=0.131196;SGB=-90.3546;VDB=0.37404;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.8:17261022 chr08:017261022 0 W/17261022-17261022 FN854-S Single Base Substitution T-A INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN4305-S.SNP.8:17261582 chr08:017261582 0 W/17261582-17261582 FN4305-S SNP T -> C AC=2;AN=170;BQB=0.598478;DP=2880;DP4=1226,1503,22,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000694444;MQB=7.75105e-20;MQSB=0.982754;RPB=0.826797;SGB=131.272;VDB=0.528159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.8:17261952 chr08:017261952 0 W/17261952-17261952 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2150-S.SNP.8:17265504 chr08:017265504 0 W/17265504-17265504 FN2150-S SNP C -> A AC=1;AN=168;BQB=0.406665;DP=2454;DP4=1287,1132,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00016524;MQSB=0.848765;RPB=0.836164;SGB=10.0307;VDB=0.810159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.8:17268919 chr08:017268919 0 W/17268919-17268919 FN1666-S SNP C -> T AC=1;AN=188;BQB=0.122332;DP=1894;DP4=1126,740,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0139857;MQSB=0.9786;RPB=0.805001;SGB=13.3597;VDB=0.520343;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.8:17271856 chr08:017271856 0 W/17271856-17271856 FN902-S Single Base Substitution C-A INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2646-S.SNP.8:17272528 chr08:017272528 0 W/17272528-17272528 FN2646-S SNP G -> C AC=1;AN=200;BQB=0.939887;DP=3868;DP4=1884,1633,8,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.16118e-05;MQSB=3.66535e-08;RPB=0.750841;SGB=40.2696;VDB=0.95798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D107H|113|LOC_Os08g28300|protein_coding|CODING|LOC_Os08g28300.1|1|1) FN4037-S.SNP.8:17308591 chr08:017308591 0 W/17308591-17308591 FN4037-S SNP C -> T AC=2;AN=168;BQB=0.950103;DP=2579;DP4=1068,1380,8,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.25366e-12;MQSB=0.621707;RPB=0.264695;SGB=46.4929;VDB=0.0857045;EFF=INTRON(MODIFIER||||148|LOC_Os08g28370|protein_coding|CODING|LOC_Os08g28370.1|2|1) FN1536-S.SNP.8:17313096 chr08:017313096 0 W/17313096-17313096 FN1536-S Single Base Substitution C-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN737-S.SNP.8:17313478 chr08:017313478 0 W/17313478-17313478 FN737-S Single Base Substitution A-T INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN-353.SNP.8:17313782 chr08:017313782 0 W/17313782-17313782 FN-353 Single Base Substitution G-A INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN496-S.SNP.8:17324218 chr08:017324218 0 W/17324218-17324218 FN496-S Single Base Substitution C-T INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1182-S.SNP.8:17331515 chr08:017331515 0 W/17331515-17331515 FN1182-S Single Base Substitution C-G INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. 701-1.SNP.8:17334145 chr08:017334145 0 W/17334145-17334145 701-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN3579-S.SNP.8:17337635 chr08:017337635 0 W/17337635-17337635 FN3579-S SNP T -> G AC=2;AN=188;BQB=0.999934;DP=2968;DP4=1251,1604,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000336927;MQB=3.31658e-14;MQSB=0.792246;RPB=0.734213;SGB=48.9658;VDB=0.156422;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.8:17341933 chr08:017341933 0 W/17341933-17341933 FN811-S Single Base Substitution A-G INTRON HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1274-S.SNP.8:17345826 chr08:017345826 0 W/17345826-17345826 FN1274-S Single Base Substitution C-G INTRON HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1112-S.SNP.8:17348560 chr08:017348560 0 W/17348560-17348560 FN1112-S Single Base Substitution A-G INTRON HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN726-S.SNP.8:17364060 chr08:017364060 0 W/17364060-17364060 FN726-S Single Base Substitution C-G INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1492-S.SNP.8:17367275 chr08:017367275 0 W/17367275-17367275 FN1492-S Single Base Substitution A-T INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1237-S.SNP.8:17378774 chr08:017378774 0 W/17378774-17378774 FN1237-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1407-S.SNP.8:17387945 chr08:017387945 0 W/17387945-17387945 FN1407-S Single Base Substitution T-G INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN454-S.SNP.8:17390213 chr08:017390213 0 W/17390213-17390213 FN454-S Single Base Substitution T-A INTRON HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN454-S.SNP.8:17390214 chr08:017390214 0 W/17390214-17390214 FN454-S Single Base Substitution C-T INTRON HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN2180-S.SNP.8:17391607 chr08:017391607 0 W/17391607-17391607 FN2180-S SNP C -> T AC=1;AN=190;BQB=0.986549;DP=4041;DP4=1825,1879,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000494927;MQB=0.000349817;MQSB=8.22103e-12;RPB=0.925901;SGB=62.7569;VDB=0.769752;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V128|380|LOC_Os08g28490|protein_coding|CODING|LOC_Os08g28490.1|3|1) FN-287.SNP.8:17393358 chr08:017393358 0 W/17393358-17393358 FN-287 Single Base Substitution G-A INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2784-S.SNP.8:17394624 chr08:017394624 0 W/17394624-17394624 FN2784-S SNP T -> C AC=1;AN=188;BQB=0.663676;DP=4065;DP4=1859,1914,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000246002;MQB=1.5743e-06;MQSB=0.965904;RPB=0.130935;SGB=-15.6211;VDB=0.474445;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.8:17397376 chr08:017397376 0 W/17397376-17397376 FN1439-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g28500 retrotransposon protein, putative, unclassified, expressed SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN1439-S.SNP.8:17397377 chr08:017397377 0 W/17397377-17397377 FN1439-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g28500 retrotransposon protein, putative, unclassified, expressed SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2447.SNP.8:17398135 chr08:017398135 0 W/17398135-17398135 FN2447 SNP G -> A AC=1;AN=200;BQB=0.64012;DP=4453;DP4=2174,1968,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00134741;MQB=4.3522e-07;MQSB=0.232251;RPB=0.447908;SGB=21.6694;VDB=0.592075;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A311T|1053|LOC_Os08g28500|protein_coding|CODING|LOC_Os08g28500.1|2|1) FN438-S.SNP.8:17399705 chr08:017399705 0 W/17399705-17399705 FN438-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g28500 retrotransposon protein, putative, unclassified, expressed SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN3787-S.SNP.8:17402555 chr08:017402555 0 W/17402555-17402555 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.997371;DP=2529;DP4=1312,1126,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0213523;MQB=0.00026204;MQSB=5.97996e-05;RPB=0.944027;SGB=33.8752;VDB=0.392716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V972I|1053|LOC_Os08g28500|protein_coding|CODING|LOC_Os08g28500.1|8|1) FN-286.SNP.8:17404983 chr08:017404983 0 W/17404983-17404983 FN-286 Single Base Substitution G-C INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3909-S.SNP.8:17404983 chr08:017404983 0 W/17404983-17404983 FN3909-S SNP G -> C AC=2;AN=158;BQB=0.556713;DP=1969;DP4=915,964,10,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.48133e-09;MQSB=0.231909;RPB=0.899205;SGB=86.3921;VDB=0.991094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.8:17405004 chr08:017405004 0 W/17405004-17405004 FN1345-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3993-S.SNP.8:17407356 chr08:017407356 0 W/17407356-17407356 FN3993-S SNP G -> A AC=1;AN=168;BQB=0.961017;DP=2491;DP4=1349,1063,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.21485e-08;MQSB=0.996806;RPB=0.422423;SGB=61.0344;VDB=0.0322535;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N272|348|LOC_Os08g28510|protein_coding|CODING|LOC_Os08g28510.1|5|1) FN1113-S.SNP.8:17407965 chr08:017407965 0 W/17407965-17407965 FN1113-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g28510 expressed protein SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3990-S.SNP.8:17408408 chr08:017408408 0 W/17408408-17408408 FN3990-S SNP A -> T AC=1;AN=168;BQB=0.71814;DP=2589;DP4=1120,1347,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.17507e-12;MQSB=0.977279;RPB=0.924376;SGB=36.7696;VDB=0.161278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H121Q|348|LOC_Os08g28510|protein_coding|CODING|LOC_Os08g28510.1|2|1) FN1477-S.SNP.8:17414417 chr08:017414417 0 W/17414417-17414417 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN4188-S.SNP.8:17415149 chr08:017415149 0 W/17415149-17415149 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.581528;DP=2534;DP4=1097,1346,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00157853;MQB=1.39354e-05;MQSB=0.958295;RPB=0.779028;SGB=38.3207;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.8:17417219 chr08:017417219 0 W/17417219-17417219 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.405366;DP=5049;DP4=2484,2276,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198059;MQB=1.96808e-08;MQSB=0.887775;RPB=0.877924;SGB=28.7675;VDB=0.644371;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.8:17418744 chr08:017418744 0 W/17418744-17418744 FN899-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g28520 retrotransposon protein, putative, unclassified SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN977-S.SNP.8:17420385 chr08:017420385 0 W/17420385-17420385 FN977-S Single Base Substitution G-A INTERGENIC HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN1754-S.SNP.8:17421951 chr08:017421951 0 W/17421951-17421951 FN1754-S SNP A -> G AC=1;AN=188;BQB=0.900527;DP=2224;DP4=605,1549,3,14;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0499101;MQB=0.969291;MQSB=0;RPB=0.729658;SGB=50.1574;VDB=0.642875;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.8:17424109 chr08:017424109 0 W/17424109-17424109 FN631-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN807-S.SNP.8:17431431 chr08:017431431 0 W/17431431-17431431 FN807-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g28540 resistance protein LR10, putative, expressed SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1526-S.SNP.8:17432490 chr08:017432490 0 W/17432490-17432490 FN1526-S Single Base Substitution A-T INTERGENIC Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN2107-S.SNP.8:17434570 chr08:017434570 0 W/17434570-17434570 FN2107-S SNP C -> T AC=2;AN=168;BQB=0.985829;DP=3237;DP4=1673,1481,23,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.14039e-20;MQSB=0.989634;RPB=0.198902;SGB=39.9611;VDB=0.0844776;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G123R|214|LOC_Os08g28550|protein_coding|CODING|LOC_Os08g28550.1|1|1) FN4208-S.SNP.8:17441337 chr08:017441337 0 W/17441337-17441337 FN4208-S SNP T -> C AC=2;AN=170;BQB=0.943139;DP=2430;DP4=1186,1159,20,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.48909e-19;MQSB=0.913919;RPB=0.919829;SGB=100.288;VDB=0.82406;EFF=INTRON(MODIFIER||||388|LOC_Os08g28560|protein_coding|CODING|LOC_Os08g28560.1|2|1) FN944-S.SNP.8:17444619 chr08:017444619 0 W/17444619-17444619 FN944-S Single Base Substitution C-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1439-S.SNP.8:17447913 chr08:017447913 0 W/17447913-17447913 FN1439-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN4275-S.SNP.8:17449478 chr08:017449478 0 W/17449478-17449478 FN4275-S SNP G -> A AC=2;AN=170;BQB=0.972903;DP=2401;DP4=1431,906,8,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.04449e-09;MQSB=0.401211;RPB=0.789461;SGB=70.0854;VDB=0.886632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.8:17455807 chr08:017455807 0 W/17455807-17455807 FN1619-S Single Base Substitution T-A INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1227-S.SNP.8:17460443 chr08:017460443 0 W/17460443-17460443 FN1227-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g28590 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2411.SNP.8:17462139 chr08:017462139 0 W/17462139-17462139 FN2411 SNP C -> T AC=1;AN=200;BQB=0.99444;DP=4166;DP4=2030,1948,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26462e-08;MQSB=0.999833;RPB=0.99941;SGB=54.2646;VDB=0.461728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.8:17462447 chr08:017462447 0 W/17462447-17462447 FN1665-S Single Base Substitution C-T INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3828-S.SNP.8:17467817 chr08:017467817 0 W/17467817-17467817 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.728624;DP=2579;DP4=1142,1358,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00581621;MQB=0.00118351;MQSB=0.987183;RPB=0.99751;SGB=25.439;VDB=0.395899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.8:17475520 chr08:017475520 0 W/17475520-17475520 FN1468-S Single Base Substitution A-T INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN3467-S.SNP.8:17479392 chr08:017479392 0 W/17479392-17479392 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.0372934;DP=2366;DP4=1129,1119,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.90086e-06;MQSB=0.997941;RPB=0.591425;SGB=56.8786;VDB=0.572327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.8:17481549 chr08:017481549 0 W/17481549-17481549 FN2532-S SNP A -> T AC=1;AN=186;BQB=0.980403;DP=3718;DP4=1811,1741,7,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.55157e-08;MQSB=0.997257;RPB=0.676583;SGB=54.144;VDB=0.058045;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.8:17482672 chr08:017482672 0 W/17482672-17482672 FN2470 SNP G -> C AC=1;AN=200;BQB=0.448467;DP=4715;DP4=2102,2328,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05538e-06;MQSB=0.982728;RPB=0.709974;SGB=49.6594;VDB=0.916586;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.8:17486232 chr08:017486232 0 W/17486232-17486232 FN742-S Single Base Substitution A-G INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3727-S.SNP.8:17494847 chr08:017494847 0 W/17494847-17494847 FN3727-S SNP C -> T AC=1;AN=190;BQB=0.584854;DP=2789;DP4=1322,1344,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30097e-08;MQSB=0.988765;RPB=0.975273;SGB=4.11111;VDB=0.225917;EFF=INTRON(MODIFIER||||1495|LOC_Os08g28630|protein_coding|CODING|LOC_Os08g28630.1|7|1) FN-112.SNP.8:17498743 chr08:017498743 0 W/17498743-17498743 FN-112 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1695-S.SNP.8:17498743 chr08:017498743 0 W/17498743-17498743 FN1695-S SNP G -> A AC=2;AN=188;BQB=0.706414;DP=2345;DP4=1119,1184,11,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.78069e-13;MQSB=0.984479;RPB=0.824918;SGB=48.9658;VDB=0.825073;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N227|599|LOC_Os08g28640|protein_coding|CODING|LOC_Os08g28640.1|3|1) FN3445-S.SNP.8:17498743 chr08:017498743 0 W/17498743-17498743 FN3445-S SNP G -> A AC=2;AN=184;BQB=0.371469;DP=2876;DP4=1196,1592,6,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.1535e-09;MQSB=0.996884;RPB=0.349666;SGB=93.9603;VDB=0.104285;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N227|599|LOC_Os08g28640|protein_coding|CODING|LOC_Os08g28640.1|3|1) FN3897-S.SNP.8:17498743 chr08:017498743 0 W/17498743-17498743 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.90898;DP=2464;DP4=1032,1347,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.03765e-11;MQSB=0.937816;RPB=0.916903;SGB=50.9207;VDB=0.676573;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N227|599|LOC_Os08g28640|protein_coding|CODING|LOC_Os08g28640.1|3|1) FN514-S.SNP.8:17500567 chr08:017500567 0 W/17500567-17500567 FN514-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1025-S.SNP.8:17501122 chr08:017501122 0 W/17501122-17501122 FN1025-S Single Base Substitution G-C INTRON HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3510-S.SNP.8:17501948 chr08:017501948 0 W/17501948-17501948 FN3510-S SNP C -> T AC=1;AN=188;BQB=0.983413;DP=2651;DP4=1356,1232,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.57269e-08;MQSB=0.946503;RPB=0.474827;SGB=35.9843;VDB=0.408663;EFF=INTRON(MODIFIER||||143|LOC_Os08g28650|protein_coding|CODING|LOC_Os08g28650.1|2|1) FN678-S.SNP.8:17507277 chr08:017507277 0 W/17507277-17507277 FN678-S Single Base Substitution G-A INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3355-S.SNP.8:17525585 chr08:017525585 0 W/17525585-17525585 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.999409;DP=3064;DP4=1273,1668,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.84231e-07;MQSB=0.0478715;RPB=0.631225;SGB=39.2697;VDB=0.291443;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.8:17525704 chr08:017525704 0 W/17525704-17525704 FN1058-S Single Base Substitution A-T INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3913-S.SNP.8:17532393 chr08:017532393 0 W/17532393-17532393 FN3913-S SNP G -> A AC=1;AN=158;BQB=0.962218;DP=2675;DP4=1332,1188,13,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08754e-12;MQSB=0.987089;RPB=0.617614;SGB=71.1374;VDB=0.976771;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.8:17534357 chr08:017534357 0 W/17534357-17534357 FN3709-S SNP T -> G AC=1;AN=190;BQB=0.415424;DP=2799;DP4=1360,1306,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000129708;MQSB=0.970699;RPB=0.994441;SGB=25.439;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.8:17536151 chr08:017536151 0 W/17536151-17536151 FN1439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN1439-S.SNP.8:17536152 chr08:017536152 0 W/17536152-17536152 FN1439-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN3430-S.SNP.8:17536712 chr08:017536712 0 W/17536712-17536712 FN3430-S SNP T -> A AC=2;AN=184;BQB=0.877373;DP=3206;DP4=1482,1531,10,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.06977e-15;MQSB=0.856393;RPB=0.994512;SGB=102.662;VDB=0.519265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.8:17539170 chr08:017539170 0 W/17539170-17539170 FN1480-S Single Base Substitution A-T INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN4124-S.SNP.8:17539208 chr08:017539208 0 W/17539208-17539208 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.770303;DP=2202;DP4=640,1403,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.59791e-05;MQSB=0.961651;RPB=0.467017;SGB=18.1224;VDB=0.932418;EFF=INTRON(MODIFIER||||344|LOC_Os08g28700|protein_coding|CODING|LOC_Os08g28700.1|2|1) FN3697-S.SNP.8:17543486 chr08:017543486 0 W/17543486-17543486 FN3697-S SNP G -> A AC=1;AN=190;BQB=0.67302;DP=3007;DP4=1229,1689,1,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68389e-05;MQSB=0.892399;RPB=0.977017;SGB=39.9877;VDB=0.592385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.8:17547538 chr08:017547538 0 W/17547538-17547538 FN1292-S Single Base Substitution A-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2320.SNP.8:17548922 chr08:017548922 0 W/17548922-17548922 FN2320 SNP C -> T AC=1;AN=192;BQB=0.0406418;DP=5054;DP4=2434,2070,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197863;MQB=2.77743e-06;MQSB=0.174146;RPB=0.410369;SGB=-58.7582;VDB=0.600299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.8:17550670 chr08:017550670 0 W/17550670-17550670 FN2308 SNP C -> T AC=1;AN=192;BQB=0.910821;DP=4701;DP4=2237,2229,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.33336e-15;MQSB=0.83917;RPB=0.996257;SGB=103.983;VDB=0.249222;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.8:17554898 chr08:017554898 0 W/17554898-17554898 FN4075-S SNP A -> G AC=2;AN=182;BQB=0.806698;DP=2157;DP4=1023,1063,7,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.2189e-07;MQSB=0.758603;RPB=0.766342;SGB=62.1548;VDB=0.542796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.8:17554967 chr08:017554967 0 W/17554967-17554967 FN2335 SNP G -> C AC=2;AN=192;BQB=0.881066;DP=5266;DP4=2366,2658,24,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.74187e-31;MQSB=0.999273;RPB=0.951344;SGB=182.354;VDB=0.987103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.8:17555664 chr08:017555664 0 W/17555664-17555664 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.963092;DP=2492;DP4=1202,1182,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.82772e-07;MQSB=0.994139;RPB=0.0496819;SGB=35.7479;VDB=0.156529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.8:17564089 chr08:017564089 0 W/17564089-17564089 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.939928;DP=2535;DP4=1320,1111,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.59371e-08;MQSB=0.999885;RPB=0.983657;SGB=47.0672;VDB=0.556787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.8:17567185 chr08:017567185 0 W/17567185-17567185 FN3293-S SNP A -> T AC=1;AN=184;BQB=0.211938;DP=3078;DP4=1503,1422,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11261e-05;MQSB=0.993666;RPB=0.779622;SGB=20.7533;VDB=0.572753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.8:17576688 chr08:017576688 0 W/17576688-17576688 FN3424-S SNP A -> G AC=1;AN=184;BQB=0.998761;DP=2779;DP4=1202,1461,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52065e-10;MQSB=0.870267;RPB=0.483389;SGB=33.3622;VDB=0.0765469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.8:17576846 chr08:017576846 0 W/17576846-17576846 FN3796-S SNP T -> G AC=2;AN=190;BQB=0.990927;DP=2437;DP4=1274,1060,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.82424e-14;MQSB=0.946255;RPB=0.996551;SGB=44.0907;VDB=0.494446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.8:17577783 chr08:017577783 0 W/17577783-17577783 FN3701-S SNP C -> T AC=2;AN=190;BQB=0.568808;DP=3085;DP4=1472,1462,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.75192e-12;MQSB=0.982483;RPB=0.814331;SGB=44.0907;VDB=0.155705;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.8:17577783 chr08:017577783 0 W/17577783-17577783 FN4070-S SNP C -> T AC=1;AN=182;BQB=0.634876;DP=2730;DP4=1197,1424,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.51184e-10;MQSB=0.99104;RPB=0.988985;SGB=30.6767;VDB=0.728559;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.8:17577783 chr08:017577783 0 W/17577783-17577783 FN690-S Single Base Substitution C-T INTERGENIC HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1427-S.SNP.8:17580535 chr08:017580535 0 W/17580535-17580535 FN1427-S Single Base Substitution C-G INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN798-S.SNP.8:17595900 chr08:017595900 0 W/17595900-17595900 FN798-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN815-S.SNP.8:17596536 chr08:017596536 0 W/17596536-17596536 FN815-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN-159.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN-159 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN-73.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN-73 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1480-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN1480-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1655-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN1655-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN2149-S SNP G -> A AC=2;AN=168;BQB=0.505339;DP=3286;DP4=1862,1379,17,11;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.0143031;MQB=7.05123e-05;MQSB=0.879964;RPB=0.36351;SGB=53.7853;VDB=0.214209;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN2322.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN2322 SNP G -> A AC=2;AN=192;BQB=0.703065;DP=4746;DP4=2411,2081,16,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00105352;MQB=2.28529e-15;MQSB=0.540078;RPB=0.0430185;SGB=64.8148;VDB=0.191966;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN3283-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN3283-S SNP G -> A AC=2;AN=184;BQB=0.979772;DP=3115;DP4=1465,1541,12,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00642055;MQB=5.09056e-10;MQSB=0.727707;RPB=0.985954;SGB=74.4875;VDB=0.239238;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN3426-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN3426-S SNP G -> A AC=2;AN=184;BQB=0.5179;DP=2942;DP4=1355,1491,7,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00849762;MQB=4.96903e-06;MQSB=0.759336;RPB=0.987237;SGB=80.3949;VDB=0.802021;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN3563-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN3563-S SNP G -> A AC=1;AN=188;BQB=0.913611;DP=2964;DP4=1471,1414,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00809717;MQB=2.03244e-09;MQSB=0.925192;RPB=0.98055;SGB=57.244;VDB=0.474707;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN3788-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN3788-S SNP G -> A AC=2;AN=190;BQB=0.347556;DP=2843;DP4=1384,1320,14,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00422089;MQB=1.78742e-11;MQSB=0.845497;RPB=0.955912;SGB=32.0809;VDB=0.913241;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D816|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|4|1) FN461-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN461-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN482-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN482-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN928-S.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN928-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN_N1-130-1.SNP.8:17598255 chr08:017598255 0 W/17598255-17598255 FN_N1-130-1 Single Base Substitution G-A Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2283.SNP.8:17601925 chr08:017601925 0 W/17601925-17601925 FN2283 SNP C -> T AC=1;AN=192;BQB=0.99963;DP=4738;DP4=2380,2118,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.24859e-10;MQSB=0.870056;RPB=0.395965;SGB=-57.3226;VDB=0.0565977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D236N|892|LOC_Os08g28770|protein_coding|CODING|LOC_Os08g28770.1|3|1) FN897-S.SNP.8:17604534 chr08:017604534 0 W/17604534-17604534 FN897-S Single Base Substitution C-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3533-S.SNP.8:17606185 chr08:017606185 0 W/17606185-17606185 FN3533-S SNP T -> A AC=1;AN=188;BQB=0.999613;DP=3143;DP4=1587,1315,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.13041e-05;MQSB=0.995298;RPB=0.622665;SGB=5.73019;VDB=0.732531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D94V|113|LOC_Os08g28784|protein_coding|CODING|LOC_Os08g28784.1|1|1) FN513-S.SNP.8:17606950 chr08:017606950 0 W/17606950-17606950 FN513-S Single Base Substitution A-T INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1300-S.SNP.8:17607648 chr08:017607648 0 W/17607648-17607648 FN1300-S Single Base Substitution T-C INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2774-S.SNP.8:17609407 chr08:017609407 0 W/17609407-17609407 FN2774-S SNP A -> G AC=2;AN=198;BQB=0.362773;DP=4442;DP4=2067,2174,34,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.45765e-36;MQSB=0.949285;RPB=0.999863;SGB=219.905;VDB=0.00104367;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.8:17610363 chr08:017610363 0 W/17610363-17610363 FN432-S Single Base Substitution G-A INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN432-S.SNP.8:17610364 chr08:017610364 0 W/17610364-17610364 FN432-S Single Base Substitution G-T INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3358-S.SNP.8:17612099 chr08:017612099 0 W/17612099-17612099 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.995487;DP=3378;DP4=1694,1594,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24218e-08;MQSB=0.995728;RPB=0.630225;SGB=62.3078;VDB=0.0889765;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.8:17612235 chr08:017612235 0 W/17612235-17612235 FN1266-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2339.SNP.8:17615453 chr08:017615453 0 W/17615453-17615453 FN2339 SNP G -> A AC=1;AN=192;BQB=0.00387861;DP=5365;DP4=2861,2134,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.35511e-08;MQSB=1;RPB=0.999924;SGB=-107.312;VDB=0.0263211;EFF=INTERGENIC(MODIFIER||||||||||1) FN-25.SNP.8:17619796 chr08:017619796 0 W/17619796-17619796 FN-25 Single Base Substitution A-G INTERGENIC Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN2689-S.SNP.8:17622214 chr08:017622214 0 W/17622214-17622214 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.484048;DP=4415;DP4=1967,2241,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.89565e-09;MQSB=0.901417;RPB=0.648987;SGB=58.8698;VDB=0.705322;EFF=INTRON(MODIFIER||||105|LOC_Os08g28810|protein_coding|CODING|LOC_Os08g28810.1|1|1) FN2689-S.SNP.8:17622216 chr08:017622216 0 W/17622216-17622216 FN2689-S SNP A -> G AC=1;AN=200;BQB=0.593732;DP=4399;DP4=1949,2184,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24524e-11;MQSB=0.886795;RPB=0.618273;SGB=29.4849;VDB=0.748287;EFF=INTRON(MODIFIER||||105|LOC_Os08g28810|protein_coding|CODING|LOC_Os08g28810.1|1|1) FN-306.SNP.8:17635884 chr08:017635884 0 W/17635884-17635884 FN-306 Single Base Substitution A-T INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN871-S.SNP.8:17636933 chr08:017636933 0 W/17636933-17636933 FN871-S Single Base Substitution T-C INTRON HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN871-S.SNP.8:17636934 chr08:017636934 0 W/17636934-17636934 FN871-S Single Base Substitution G-T INTRON HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1072-S.SNP.8:17640572 chr08:017640572 0 W/17640572-17640572 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2627-S.SNP.8:17640915 chr08:017640915 0 W/17640915-17640915 FN2627-S SNP C -> T AC=1;AN=200;BQB=0.432293;DP=4880;DP4=2279,2265,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70718e-09;MQSB=0.985642;RPB=0.997391;SGB=-36.5;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.8:17643403 chr08:017643403 0 W/17643403-17643403 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3370-S.SNP.8:17645983 chr08:017645983 0 W/17645983-17645983 FN3370-S SNP T -> A AC=2;AN=184;BQB=0.988317;DP=3101;DP4=1355,1620,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.41098e-17;MQSB=0.920682;RPB=0.325964;SGB=99.14;VDB=0.325553;EFF=INTRON(MODIFIER||||232|LOC_Os08g28860|protein_coding|CODING|LOC_Os08g28860.1|3|1) FN1512-S.SNP.8:17647013 chr08:017647013 0 W/17647013-17647013 FN1512-S Single Base Substitution T-C INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3903-S.SNP.8:17652966 chr08:017652966 0 W/17652966-17652966 FN3903-S SNP G -> T AC=2;AN=158;BQB=0.868359;DP=2841;DP4=1181,1544,22,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.25884e-20;MQSB=0.998919;RPB=0.711122;SGB=156.303;VDB=0.858611;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L294I|977|LOC_Os08g28870|protein_coding|CODING|LOC_Os08g28870.1|1|1) FN2724-S.SNP.8:17656423 chr08:017656423 0 W/17656423-17656423 FN2724-S SNP T -> C AC=1;AN=200;BQB=0.117708;DP=4542;DP4=2112,2238,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25532e-06;MQSB=0.995007;RPB=0.793716;SGB=24.2746;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.8:17662898 chr08:017662898 0 W/17662898-17662898 FN2659-S SNP G -> T AC=1;AN=200;BQB=0.565251;DP=5162;DP4=2566,2299,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28343e-10;MQSB=0.972225;RPB=0.174465;SGB=26.8797;VDB=0.0554092;EFF=INTERGENIC(MODIFIER||||||||||1) FN_846-8-1.SNP.8:17663255 chr08:017663255 0 W/17663255-17663255 FN_846-8-1 Single Base Substitution G-A Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN2437.SNP.8:17669720 chr08:017669720 0 W/17669720-17669720 FN2437 SNP C -> T AC=2;AN=200;BQB=0.523908;DP=4490;DP4=2042,2115,26,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.56277e-36;MQSB=0.950997;RPB=0.967657;SGB=141.507;VDB=0.997292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.8:17671464 chr08:017671464 0 W/17671464-17671464 FN1027-S Single Base Substitution G-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1323-S.SNP.8:17674829 chr08:017674829 0 W/17674829-17674829 FN1323-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN762-S.SNP.8:17680226 chr08:017680226 0 W/17680226-17680226 FN762-S Single Base Substitution A-G INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2782-S.SNP.8:17681852 chr08:017681852 0 W/17681852-17681852 FN2782-S SNP C -> G AC=1;AN=186;BQB=0.508552;DP=3545;DP4=1704,1612,12,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.51748e-13;MQSB=0.676893;RPB=0.518524;SGB=100.095;VDB=0.672936;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.8:17683255 chr08:017683255 0 W/17683255-17683255 FN416-S Single Base Substitution G-C INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN447-S.SNP.8:17692042 chr08:017692042 0 W/17692042-17692042 FN447-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g28930 retrotransposon protein, putative, unclassified, expressed SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN692-S.SNP.8:17695018 chr08:017695018 0 W/17695018-17695018 FN692-S Single Base Substitution G-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN4148-S.SNP.8:17699940 chr08:017699940 0 W/17699940-17699940 FN4148-S SNP T -> C AC=1;AN=170;BQB=0.757781;DP=2333;DP4=1060,1151,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.10151e-06;MQSB=0.0115392;RPB=0.946575;SGB=24.5502;VDB=0.876045;EFF=INTRON(MODIFIER||||414|LOC_Os08g28940|protein_coding|CODING|LOC_Os08g28940.1|1|1) FN2403.SNP.8:17700163 chr08:017700163 0 W/17700163-17700163 FN2403 SNP C -> A AC=2;AN=200;BQB=0.110248;DP=3332;DP4=1643,1076,12,26;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=2.21328e-15;MQSB=8.56556e-06;RPB=0.197609;SGB=-469.609;VDB=0.765303;EFF=INTRON(MODIFIER||||414|LOC_Os08g28940|protein_coding|CODING|LOC_Os08g28940.1|1|1) FN3897-S.SNP.8:17705338 chr08:017705338 0 W/17705338-17705338 FN3897-S SNP C -> T AC=1;AN=158;BQB=0.218374;DP=2240;DP4=973,1171,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.18846e-08;MQSB=0.978645;RPB=0.277291;SGB=61.029;VDB=0.663597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.8:17705595 chr08:017705595 0 W/17705595-17705595 FN2692-S SNP C -> A AC=1;AN=200;BQB=0.999401;DP=5013;DP4=2583,2170,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.49502e-19;MQSB=0.931857;RPB=0.445825;SGB=63.3521;VDB=0.33397;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.8:17711710 chr08:017711710 0 W/17711710-17711710 FN1106-S Single Base Substitution T-G INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3869-S.SNP.8:17714278 chr08:017714278 0 W/17714278-17714278 FN3869-S SNP A -> T AC=1;AN=158;BQB=0.481855;DP=2467;DP4=1161,1224,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.07746e-05;MQSB=0.980935;RPB=0.221229;SGB=51.4366;VDB=0.11209;EFF=INTRON(MODIFIER||||121|LOC_Os08g28950|protein_coding|CODING|LOC_Os08g28950.1|1|1) FN2332.SNP.8:17728158 chr08:017728158 0 W/17728158-17728158 FN2332 SNP C -> A AC=1;AN=192;BQB=0.740324;DP=4861;DP4=2375,2237,17,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.2231e-14;MQSB=0.982321;RPB=0.761525;SGB=46.8644;VDB=0.280856;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.8:17734841 chr08:017734841 0 W/17734841-17734841 FN558-S Single Base Substitution A-T INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3536-S.SNP.8:17734995 chr08:017734995 0 W/17734995-17734995 FN3536-S SNP T -> A AC=1;AN=188;BQB=0.931451;DP=3425;DP4=1537,1815,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.01956e-09;MQSB=0.495768;RPB=0.133874;SGB=58.0655;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.8:17737193 chr08:017737193 0 W/17737193-17737193 FN2768-S SNP A -> G AC=1;AN=186;BQB=0.855588;DP=4200;DP4=1985,2002,14,16;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.72181e-17;MQSB=0.995281;RPB=0.489538;SGB=132.261;VDB=0.780232;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.8:17745014 chr08:017745014 0 W/17745014-17745014 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.802342;DP=4330;DP4=2366,1710,17,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49878e-13;MQSB=0.558991;RPB=0.682606;SGB=95.7111;VDB=0.318431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.8:17755773 chr08:017755773 0 W/17755773-17755773 FN3309-S SNP A -> G AC=1;AN=184;BQB=0.960351;DP=3062;DP4=1400,1563,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.48534e-10;MQSB=0.94454;RPB=0.462759;SGB=46.3132;VDB=0.0241319;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.8:17756645 chr08:017756645 0 W/17756645-17756645 FN-265 Single Base Substitution G-C INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1585-S.SNP.8:17760231 chr08:017760231 0 W/17760231-17760231 FN1585-S Single Base Substitution G-A INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3856-S.SNP.8:17760231 chr08:017760231 0 W/17760231-17760231 FN3856-S SNP G -> A AC=1;AN=158;BQB=0.802981;DP=2380;DP4=1268,1020,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.63006e-05;MQSB=0.993887;RPB=0.328002;SGB=47.0672;VDB=0.0335384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.8:17760231 chr08:017760231 0 W/17760231-17760231 FN4151-S SNP G -> A AC=2;AN=170;BQB=0.636878;DP=2429;DP4=1315,1024,23,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.74114e-16;MQSB=0.931425;RPB=0.167223;SGB=132.282;VDB=0.430695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.8:17760275 chr08:017760275 0 W/17760275-17760275 FN2768-S SNP G -> T AC=1;AN=186;BQB=0.537721;DP=3972;DP4=1950,1824,15,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000251762;MQB=7.51862e-14;MQSB=0.957772;RPB=0.791301;SGB=68.91;VDB=0.0211632;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.8:17760321 chr08:017760321 0 W/17760321-17760321 FN-211 Single Base Substitution T-C INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2711-S.SNP.8:17761225 chr08:017761225 0 W/17761225-17761225 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.000696995;DP=4727;DP4=2683,1431,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.92838e-08;MQSB=0.373488;RPB=0.606677;SGB=-35.7104;VDB=0.722594;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.8:17766882 chr08:017766882 0 W/17766882-17766882 FN3902-S SNP G -> C AC=2;AN=158;BQB=0.77538;DP=2540;DP4=1163,1281,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.20299e-10;MQSB=0.985019;RPB=0.906127;SGB=71.1374;VDB=0.779082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R272P|370|LOC_Os08g29020|protein_coding|CODING|LOC_Os08g29020.1|1|1) FN3767-S.SNP.8:17768771 chr08:017768771 0 W/17768771-17768771 FN3767-S SNP C -> T AC=2;AN=190;BQB=0.900092;DP=2168;DP4=1230,843,7,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4377e-08;MQSB=0.866704;RPB=0.939139;SGB=62.7569;VDB=0.723986;EFF=UTR_3_PRIME(MODIFIER||1591||370|LOC_Os08g29020|protein_coding|CODING|LOC_Os08g29020.1|1|1) FN3857-S.SNP.8:17768960 chr08:017768960 0 W/17768960-17768960 FN3857-S SNP A -> T AC=1;AN=158;BQB=0.964288;DP=2300;DP4=1104,1084,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.0026087;MQB=4.9315e-06;MQSB=0.537912;RPB=0.0742809;SGB=44.1818;VDB=0.192221;EFF=UTR_3_PRIME(MODIFIER||1780||370|LOC_Os08g29020|protein_coding|CODING|LOC_Os08g29020.1|1|1) FN2755-S.SNP.8:17769894 chr08:017769894 0 W/17769894-17769894 FN2755-S SNP A -> G AC=1;AN=200;BQB=0.892315;DP=4981;DP4=2362,2429,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85906e-09;MQSB=0.974916;RPB=0.988312;SGB=86.5007;VDB=0.615032;EFF=UTR_3_PRIME(MODIFIER||2714||370|LOC_Os08g29020|protein_coding|CODING|LOC_Os08g29020.1|1|1) FN917-S.SNP.8:17770375 chr08:017770375 0 W/17770375-17770375 FN917-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3892-S.SNP.8:17774368 chr08:017774368 0 W/17774368-17774368 FN3892-S SNP A -> T AC=2;AN=158;BQB=0.936371;DP=2371;DP4=1019,1259,8,13;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.00463939;MQB=0.00218647;MQSB=0.0966498;RPB=0.575915;SGB=86.3921;VDB=0.0272048;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I781|831|LOC_Os08g29030|protein_coding|CODING|LOC_Os08g29030.1|9|1) FN513-S.SNP.8:17774715 chr08:017774715 0 W/17774715-17774715 FN513-S Single Base Substitution A-C INTRON HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2138-S.SNP.8:17782938 chr08:017782938 0 W/17782938-17782938 FN2138-S SNP A -> C AC=2;AN=168;BQB=0.440956;DP=1974;DP4=359,1568,12,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.49192e-20;MQSB=0.80275;RPB=0.955645;SGB=126.516;VDB=0.532622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y354S|382|LOC_Os08g29040|protein_coding|CODING|LOC_Os08g29040.1|3|1) FN2138-S.SNP.8:17782939 chr08:017782939 0 W/17782939-17782939 FN2138-S SNP C -> T AC=2;AN=168;BQB=0.658314;DP=1967;DP4=362,1556,12,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.62564e-20;MQSB=0.804014;RPB=0.982397;SGB=107.674;VDB=0.56733;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y354|382|LOC_Os08g29040|protein_coding|CODING|LOC_Os08g29040.1|3|1) FN581-S.SNP.8:17785595 chr08:017785595 0 W/17785595-17785595 FN581-S Single Base Substitution A-T INTERGENIC HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-133.SNP.8:17787542 chr08:017787542 0 W/17787542-17787542 FN-133 Single Base Substitution T-C INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. W416-6-1.SNP.8:17790254 chr08:017790254 0 W/17790254-17790254 W416-6-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN502-S.SNP.8:17790522 chr08:017790522 0 W/17790522-17790522 FN502-S Single Base Substitution C-T INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN367-S.SNP.8:17794040 chr08:017794040 0 W/17794040-17794040 FN367-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g29050 retrotransposon protein, putative, unclassified SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN1509-S.SNP.8:17796380 chr08:017796380 0 W/17796380-17796380 FN1509-S Single Base Substitution A-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2538-S.SNP.8:17797944 chr08:017797944 0 W/17797944-17797944 FN2538-S SNP G -> A AC=1;AN=186;BQB=0.785355;DP=3602;DP4=1739,1679,5,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.81776e-05;MQSB=0.979426;RPB=0.979218;SGB=40.3588;VDB=0.902899;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P143|282|LOC_Os08g29060|protein_coding|CODING|LOC_Os08g29060.1|2|1) FN1287-S.SNP.8:17802107 chr08:017802107 0 W/17802107-17802107 FN1287-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g29080 retrotransposon protein, putative, unclassified, expressed SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2329.SNP.8:17815382 chr08:017815382 0 W/17815382-17815382 FN2329 SNP A -> C AC=1;AN=192;BQB=0.65206;DP=4811;DP4=2098,2390,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.17307e-08;MQSB=0.99989;RPB=0.951058;SGB=54.0374;VDB=0.898384;EFF=UTR_3_PRIME(MODIFIER||291||235|LOC_Os08g29100|protein_coding|CODING|LOC_Os08g29100.1|2|1) FN3945-S.SNP.8:17822016 chr08:017822016 0 W/17822016-17822016 FN3945-S SNP A -> G AC=1;AN=168;BQB=3.99618e-06;DP=2058;DP4=952,1004,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02467e-05;MQSB=0.993865;RPB=0.954413;SGB=14.8923;VDB=0.345999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.8:17833616 chr08:017833616 0 W/17833616-17833616 FN2780-S SNP T -> A AC=2;AN=198;BQB=0.960505;DP=4335;DP4=2163,1894,23,23;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=9.83047e-22;MQSB=0.962769;RPB=0.999412;SGB=54.0128;VDB=0.71567;EFF=INTRON(MODIFIER||||1161|LOC_Os08g29124|protein_coding|CODING|LOC_Os08g29124.1|6|1) FN3815-S.SNP.8:17835621 chr08:017835621 0 W/17835621-17835621 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.875327;DP=2372;DP4=1097,1172,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36198e-07;MQSB=0.996535;RPB=0.438339;SGB=53.6492;VDB=0.71365;EFF=INTRON(MODIFIER||||1161|LOC_Os08g29124|protein_coding|CODING|LOC_Os08g29124.1|4|1) FN2709-S.SNP.8:17845289 chr08:017845289 0 W/17845289-17845289 FN2709-S SNP T -> A AC=1;AN=200;BQB=0.994819;DP=4992;DP4=2400,2381,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.16397e-13;MQSB=0.987784;RPB=0.992908;SGB=86.5007;VDB=0.606682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D206E|1171|LOC_Os08g29150|protein_coding|CODING|LOC_Os08g29150.1|2|1) FN1480-S.SNP.8:17860773 chr08:017860773 0 W/17860773-17860773 FN1480-S Single Base Substitution T-C INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2281.SNP.8:17860983 chr08:017860983 0 W/17860983-17860983 FN2281 SNP G -> A AC=1;AN=192;BQB=0.997728;DP=4272;DP4=2182,1812,8,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.33155e-14;MQSB=0.455774;RPB=0.438563;SGB=86.1165;VDB=0.131941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.8:17862621 chr08:017862621 0 W/17862621-17862621 FN1565-S Single Base Substitution T-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN1373-S.SNP.8:17866939 chr08:017866939 0 W/17866939-17866939 FN1373-S Single Base Substitution A-T INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1373-S.SNP.8:17866940 chr08:017866940 0 W/17866940-17866940 FN1373-S Single Base Substitution T-A INTERGENIC Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN544-S.SNP.8:17891112 chr08:017891112 0 W/17891112-17891112 FN544-S Single Base Substitution T-G INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN405-S.SNP.8:17895337 chr08:017895337 0 W/17895337-17895337 FN405-S Single Base Substitution G-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN2330.SNP.8:17899960 chr08:017899960 0 W/17899960-17899960 FN2330 SNP A -> T AC=1;AN=192;BQB=0.889637;DP=5082;DP4=2614,2171,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.95557e-11;MQSB=0.770608;RPB=0.724804;SGB=28.9139;VDB=0.808874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.8:17910888 chr08:017910888 0 W/17910888-17910888 FN2138-S SNP A -> T AC=2;AN=168;BQB=0.932554;DP=2305;DP4=899,1363,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.38032e-14;MQSB=0.765444;RPB=0.899495;SGB=53.7853;VDB=0.0689427;EFF=INTRON(MODIFIER||||53|LOC_Os08g29210|protein_coding|CODING|LOC_Os08g29210.1|1|1) FN761-S.SNP.8:17913198 chr08:017913198 0 W/17913198-17913198 FN761-S Single Base Substitution A-T INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2469.SNP.8:17915359 chr08:017915359 0 W/17915359-17915359 FN2469 SNP G -> A AC=1;AN=200;BQB=0.392602;DP=8979;DP4=3554,4900,13,29;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.023722;MQB=3.12108e-10;MQSB=1.14334e-08;RPB=0.945559;SGB=-184.987;VDB=0.977715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.8:17922241 chr08:017922241 0 W/17922241-17922241 FN1037-S Single Base Substitution C-A INTRON HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN3357-S.SNP.8:17922706 chr08:017922706 0 W/17922706-17922706 FN3357-S SNP A -> T AC=1;AN=184;BQB=0.730022;DP=3244;DP4=1537,1572,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0225031;MQB=0.899217;MQSB=3.20413e-12;RPB=0.86216;SGB=56.8786;VDB=0.574845;EFF=INTRON(MODIFIER||||228|LOC_Os08g29230|protein_coding|CODING|LOC_Os08g29230.1|1|1) FN2458.SNP.8:17923293 chr08:017923293 0 W/17923293-17923293 FN2458 SNP C -> T AC=1;AN=200;BQB=0.825155;DP=3028;DP4=1458,1318,4,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000480527;MQSB=0.692371;RPB=0.958178;SGB=22.0312;VDB=0.160141;EFF=INTRON(MODIFIER||||228|LOC_Os08g29230|protein_coding|CODING|LOC_Os08g29230.1|1|1) FN2708-S.SNP.8:17924788 chr08:017924788 0 W/17924788-17924788 FN2708-S SNP G -> T AC=1;AN=200;BQB=0.503145;DP=4579;DP4=2116,2176,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36883e-15;MQSB=0.8535;RPB=0.894208;SGB=114.132;VDB=0.257813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.8:17925488 chr08:017925488 0 W/17925488-17925488 FN2458 SNP C -> A AC=1;AN=200;BQB=0.845289;DP=4737;DP4=2286,2188,3,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.401e-08;MQSB=0.996487;RPB=0.897601;SGB=40.2696;VDB=0.1448;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.8:17927625 chr08:017927625 0 W/17927625-17927625 FN-110 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g29240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2658-S.SNP.8:17931019 chr08:017931019 0 W/17931019-17931019 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.999962;DP=4427;DP4=2073,2011,11,11;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00790603;MQB=0.0306471;MQSB=0.000134173;RPB=0.989725;SGB=69.1109;VDB=0.731142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.8:17936246 chr08:017936246 0 W/17936246-17936246 FN2261-S SNP A -> T AC=1;AN=190;BQB=0.991201;DP=4612;DP4=2007,1896,16,22;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00108413;MQB=1.66894e-15;MQSB=0.0050555;RPB=0.750209;SGB=39.8503;VDB=0.343328;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctA|L405|1786|LOC_Os08g29250|protein_coding|CODING|LOC_Os08g29250.1|3|1) FN4137-S.SNP.8:17936548 chr08:017936548 0 W/17936548-17936548 FN4137-S SNP G -> C AC=1;AN=170;BQB=0.964327;DP=2817;DP4=1309,1418,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0880369;MQB=0.999126;MQSB=5.12901e-11;RPB=0.611354;SGB=52.3148;VDB=0.158603;EFF=INTRON(MODIFIER||||1786|LOC_Os08g29250|protein_coding|CODING|LOC_Os08g29250.1|2|1) FN1439-S.SNP.8:17942737 chr08:017942737 0 W/17942737-17942737 FN1439-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2485.SNP.8:17948674 chr08:017948674 0 W/17948674-17948674 FN2485 SNP A -> T AC=1;AN=200;BQB=0.986955;DP=9541;DP4=4450,4668,16,25;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.003878;MQB=1.52152e-09;MQSB=0.357622;RPB=0.0878087;SGB=183.209;VDB=0.477076;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.8:17949027 chr08:017949027 0 W/17949027-17949027 FN767-S Single Base Substitution G-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN1537-S.SNP.8:17949713 chr08:017949713 0 W/17949713-17949713 FN1537-S Single Base Substitution G-A INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3630-S.SNP.8:17949713 chr08:017949713 0 W/17949713-17949713 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.760722;DP=5931;DP4=2755,2924,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0134885;MQB=0.0226691;MQSB=5.00042e-11;RPB=0.997071;SGB=71.6393;VDB=0.335114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.8:17949939 chr08:017949939 0 W/17949939-17949939 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. 707-4.SNP.8:17951136 chr08:017951136 0 W/17951136-17951136 707-4 Single Base Substitution A-T INTERGENIC Homo SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. 707-6.SNP.8:17951136 chr08:017951136 0 W/17951136-17951136 707-6 Single Base Substitution A-T INTERGENIC Homo SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. FN4114-S.SNP.8:17952391 chr08:017952391 0 W/17952391-17952391 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.926187;DP=5066;DP4=2484,2480,7,12;HOB=6.03792e-05;ICB=0.000121422;MQ=27;MQ0F=0.147848;MQB=0.0862919;MQSB=0.161719;RPB=0.0347952;SGB=80.1982;VDB=0.497117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.8:17953173 chr08:017953173 0 W/17953173-17953173 FN3442-S SNP G -> A AC=1;AN=184;BQB=0.513656;DP=3755;DP4=1523,2118,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000236586;MQSB=0.241917;RPB=0.518416;SGB=28.7043;VDB=0.906218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.8:17977958 chr08:017977958 0 W/17977958-17977958 FN1448-S Single Base Substitution G-A STOP_GAINED HET LOC_Os08g29300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-402.SNP.8:17979076 chr08:017979076 0 W/17979076-17979076 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN4106-S.SNP.8:17981483 chr08:017981483 0 W/17981483-17981483 FN4106-S SNP C -> G AC=2;AN=182;BQB=0.886862;DP=2525;DP4=1299,1118,8,11;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00039604;MQB=6.96874e-09;MQSB=0.470548;RPB=0.938618;SGB=80.1982;VDB=0.715998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.8:17982730 chr08:017982730 0 W/17982730-17982730 FN3909-S SNP G -> A AC=2;AN=158;BQB=0.877412;DP=2814;DP4=1167,1539,15,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.0010661;MQB=1.07994e-15;MQSB=0.823816;RPB=0.990013;SGB=104.832;VDB=0.506415;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.8:17986257 chr08:017986257 0 W/17986257-17986257 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.999807;DP=2569;DP4=1230,1189,16,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3798e-11;MQSB=0.989697;RPB=0.512897;SGB=53.8699;VDB=0.130536;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.8:17997551 chr08:017997551 0 W/17997551-17997551 FN453-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-285.SNP.8:17998071 chr08:017998071 0 W/17998071-17998071 FN-285 Single Base Substitution A-G INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3385-S.SNP.8:17998082 chr08:017998082 0 W/17998082-17998082 FN3385-S SNP A -> G AC=2;AN=184;BQB=0.860322;DP=3168;DP4=1554,1423,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.8287e-13;MQSB=0.334179;RPB=0.999085;SGB=53.5365;VDB=0.731549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.8:17998984 chr08:017998984 0 W/17998984-17998984 FN-102 Single Base Substitution G-T INTRON HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3937-S.SNP.8:18012873 chr08:018012873 0 W/18012873-18012873 FN3937-S SNP T -> A AC=2;AN=158;BQB=0.429889;DP=2473;DP4=1128,1200,11,23;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0012131;MQB=0.00106171;MQSB=0.406584;RPB=0.889178;SGB=66.4688;VDB=0.599316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.8:18028522 chr08:018028522 0 W/18028522-18028522 FN1402-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g29400 OsFBX290 - F-box domain containing protein, expressed SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1402-S.SNP.8:18028523 chr08:018028523 0 W/18028523-18028523 FN1402-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g29400 OsFBX290 - F-box domain containing protein, expressed SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2291.SNP.8:18032909 chr08:018032909 0 W/18032909-18032909 FN2291 SNP C -> T AC=1;AN=192;BQB=0.721292;DP=5019;DP4=2259,2423,18,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.28948e-22;MQSB=0.914268;RPB=0.817052;SGB=128.889;VDB=0.459324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.8:18041013 chr08:018041013 0 W/18041013-18041013 FN2086-S SNP C -> A AC=1;AN=162;BQB=0.551514;DP=716;DP4=220,463,4,5;HOB=7.62079e-05;ICB=0.000153357;MQ=48;MQ0F=0;MQB=0.0130601;MQSB=0.245542;RPB=0.618043;SGB=21.0249;VDB=0.676899;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.8:18041013 chr08:018041013 0 W/18041013-18041013 FN4093-S SNP C -> A AC=1;AN=182;BQB=0.99213;DP=2045;DP4=549,1412,0,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.61922e-08;MQSB=0.913321;RPB=0.999942;SGB=53.1331;VDB=0.731915;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.8:18045025 chr08:018045025 0 W/18045025-18045025 FN-161 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3479-S.SNP.8:18045086 chr08:018045086 0 W/18045086-18045086 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.998179;DP=2349;DP4=999,1280,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.77267e-05;MQSB=2.09374e-06;RPB=0.295543;SGB=32.2261;VDB=0.109689;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P190L|827|LOC_Os08g29430|protein_coding|CODING|LOC_Os08g29430.1|2|1) FN545-S.SNP.8:18052192 chr08:018052192 0 W/18052192-18052192 FN545-S Single Base Substitution T-C INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1375-S.SNP.8:18053872 chr08:018053872 0 W/18053872-18053872 FN1375-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1726-S.SNP.8:18054338 chr08:018054338 0 W/18054338-18054338 FN1726-S SNP A -> G AC=2;AN=188;BQB=0.884131;DP=3264;DP4=1530,1687,15,17;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00153186;MQB=0.00245077;MQSB=0.379699;RPB=0.942971;SGB=30.2309;VDB=0.334067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.8:18060373 chr08:018060373 0 W/18060373-18060373 FN3382-S SNP T -> C AC=2;AN=184;BQB=0.254919;DP=2542;DP4=922,986,22,12;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.00354052;MQB=0.0102591;MQSB=1.6503e-18;RPB=0.357744;SGB=-25.1889;VDB=0.025992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.8:18061534 chr08:018061534 0 W/18061534-18061534 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.437743;DP=2274;DP4=1134,950,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.159191;MQB=0.85658;MQSB=3.08047e-09;RPB=0.0867862;SGB=18.552;VDB=0.165646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.8:18063115 chr08:018063115 0 W/18063115-18063115 FN-115 Single Base Substitution C-T INTRON HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-201.SNP.8:18066214 chr08:018066214 0 W/18066214-18066214 FN-201 Single Base Substitution C-T INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2715-S.SNP.8:18073683 chr08:018073683 0 W/18073683-18073683 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.944449;DP=4776;DP4=2265,2255,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.6847e-11;MQSB=0.989603;RPB=0.488919;SGB=65.5058;VDB=0.051111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R1429C|1726|LOC_Os08g29490|protein_coding|CODING|LOC_Os08g29490.1|5|1) FN3709-S.SNP.8:18075049 chr08:018075049 0 W/18075049-18075049 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.886465;DP=2448;DP4=1200,1140,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000408497;MQB=1.06398e-07;MQSB=0.814257;RPB=0.935189;SGB=49.0954;VDB=0.781161;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A1021V|1726|LOC_Os08g29490|protein_coding|CODING|LOC_Os08g29490.1|4|1) FN1018-S.SNP.8:18076460 chr08:018076460 0 W/18076460-18076460 FN1018-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g29490 retrotransposon protein, putative, unclassified, expressed SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1084-S.SNP.8:18082378 chr08:018082378 0 W/18082378-18082378 FN1084-S Single Base Substitution C-T INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN521-S.SNP.8:18087953 chr08:018087953 0 W/18087953-18087953 FN521-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g29500 histone-like transcription factor and archaeal histone, putative, expressed SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN521-S.SNP.8:18087954 chr08:018087954 0 W/18087954-18087954 FN521-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g29500 histone-like transcription factor and archaeal histone, putative, expressed SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN1476-S.SNP.8:18088620 chr08:018088620 0 W/18088620-18088620 FN1476-S Single Base Substitution G-T INTRON HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2659-S.SNP.8:18105086 chr08:018105086 0 W/18105086-18105086 FN2659-S SNP C -> G AC=1;AN=200;BQB=0.996;DP=5427;DP4=2785,2363,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000184264;MQB=1.87784e-15;MQSB=0.991152;RPB=0.37588;SGB=63.3521;VDB=0.697501;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A236P|312|LOC_Os08g29530|protein_coding|CODING|LOC_Os08g29530.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A236P|312|LOC_Os08g29530|protein_coding|CODING|LOC_Os08g29530.2|4|1) FN2535-S.SNP.8:18116882 chr08:018116882 0 W/18116882-18116882 FN2535-S SNP G -> C AC=2;AN=198;BQB=0.864554;DP=3983;DP4=1796,2001,9,10;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=8.40351e-09;MQSB=0.786934;RPB=0.146855;SGB=81.7147;VDB=0.127902;EFF=INTRON(MODIFIER||||326|LOC_Os08g29550|protein_coding|CODING|LOC_Os08g29550.1|1|1) FN697-S.SNP.8:18117421 chr08:018117421 0 W/18117421-18117421 FN697-S Single Base Substitution G-A INTRON HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN-189.SNP.8:18120331 chr08:018120331 0 W/18120331-18120331 FN-189 Single Base Substitution T-C INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2386.SNP.8:18124384 chr08:018124384 0 W/18124384-18124384 FN2386 SNP T -> C AC=1;AN=192;BQB=0.353742;DP=6565;DP4=3051,2981,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.058035;MQB=0.74728;MQSB=2.27415e-31;RPB=0.416309;SGB=46.9087;VDB=0.365321;EFF=INTRON(MODIFIER||||1294|LOC_Os08g29560|protein_coding|CODING|LOC_Os08g29560.1|3|1) FN1184-S.SNP.8:18149510 chr08:018149510 0 W/18149510-18149510 FN1184-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3565-S.SNP.8:18149850 chr08:018149850 0 W/18149850-18149850 FN3565-S SNP G -> A AC=1;AN=188;BQB=0.87084;DP=2299;DP4=1141,1090,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.18817e-10;MQSB=0.929498;RPB=0.682216;SGB=67.1521;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.8:18162779 chr08:018162779 0 W/18162779-18162779 FN-259 Single Base Substitution T-C INTERGENIC HOMO SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN2719-S.SNP.8:18170009 chr08:018170009 0 W/18170009-18170009 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.999825;DP=4864;DP4=2202,2454,18,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00123355;MQB=4.37393e-15;MQSB=0.55658;RPB=0.733895;SGB=58.1418;VDB=0.566153;EFF=INTRON(MODIFIER||||102|LOC_Os08g29615|protein_coding|CODING|LOC_Os08g29615.1|1|1) FN1270-S.SNP.8:18170424 chr08:018170424 0 W/18170424-18170424 FN1270-S Single Base Substitution G-A INTRON HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. W450-6-1.SNP.8:18178204 chr08:018178204 0 W/18178204-18178204 W450-6-1 Single Base Substitution A-G INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3782-S.SNP.8:18182353 chr08:018182353 0 W/18182353-18182353 FN3782-S SNP G -> T AC=1;AN=190;BQB=0.955922;DP=2490;DP4=1181,1201,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.47933e-06;MQSB=0.98418;RPB=0.958277;SGB=44.5415;VDB=0.721802;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.8:18182441 chr08:018182441 0 W/18182441-18182441 FN-278 Single Base Substitution A-G INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN785-S.SNP.8:18183614 chr08:018183614 0 W/18183614-18183614 FN785-S Single Base Substitution A-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1319-S.SNP.8:18184056 chr08:018184056 0 W/18184056-18184056 FN1319-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN492-S.SNP.8:18185023 chr08:018185023 0 W/18185023-18185023 FN492-S Single Base Substitution C-A INTRON HOMO SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3432-S.SNP.8:18186354 chr08:018186354 0 W/18186354-18186354 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.889789;DP=2380;DP4=955,1280,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.22533e-14;MQSB=0.818442;RPB=0.235402;SGB=74.4875;VDB=0.509214;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.8:18188531 chr08:018188531 0 W/18188531-18188531 FN3308-S SNP G -> A AC=1;AN=184;BQB=0.997926;DP=3347;DP4=1509,1681,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.57223e-06;MQSB=0.956683;RPB=0.411111;SGB=48.7425;VDB=0.38912;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.8:18188950 chr08:018188950 0 W/18188950-18188950 FN-298 Single Base Substitution G-A INTERGENIC HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN_831-4-1.SNP.8:18195766 chr08:018195766 0 W/18195766-18195766 FN_831-4-1 Single Base Substitution A-G HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN_N1-151-7.SNP.8:18209044 chr08:018209044 0 W/18209044-18209044 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN757-S.SNP.8:18217724 chr08:018217724 0 W/18217724-18217724 FN757-S Single Base Substitution T-C INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2595-S.SNP.8:18226376 chr08:018226376 0 W/18226376-18226376 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.995418;DP=4179;DP4=1902,2022,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0;MQB=6.20753e-05;MQSB=0.000271066;RPB=0.482466;SGB=21.559;VDB=0.440098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.8:18228163 chr08:018228163 0 W/18228163-18228163 FN1421-S Single Base Substitution A-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3310-S.SNP.8:18230221 chr08:018230221 0 W/18230221-18230221 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.985429;DP=2857;DP4=1492,1237,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000700035;MQB=0.000334454;MQSB=0.000253981;RPB=0.955115;SGB=80.3949;VDB=0.203386;EFF=INTRON(MODIFIER||||1191|LOC_Os08g29690|protein_coding|CODING|LOC_Os08g29690.1|1|1) FN835-S.SNP.8:18230854 chr08:018230854 0 W/18230854-18230854 FN835-S Single Base Substitution A-G INTRON HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN450-S.SNP.8:18238311 chr08:018238311 0 W/18238311-18238311 FN450-S Single Base Substitution C-T INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN2674-S.SNP.8:18244174 chr08:018244174 0 W/18244174-18244174 FN2674-S SNP G -> C AC=1;AN=200;BQB=0.872216;DP=5011;DP4=2117,2623,6,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.58661e-09;MQSB=0.798827;RPB=0.61894;SGB=76.3213;VDB=0.414899;EFF=INTRON(MODIFIER||||343|LOC_Os08g29710|protein_coding|CODING|LOC_Os08g29710.1|1|1) FN323-S.SNP.8:18247621 chr08:018247621 0 W/18247621-18247621 FN323-S Single Base Substitution T-A INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-222.SNP.8:18249104 chr08:018249104 0 W/18249104-18249104 FN-222 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN1240-S.SNP.8:18249104 chr08:018249104 0 W/18249104-18249104 FN1240-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1582-S.SNP.8:18249104 chr08:018249104 0 W/18249104-18249104 FN1582-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3391-S.SNP.8:18249104 chr08:018249104 0 W/18249104-18249104 FN3391-S SNP C -> T AC=1;AN=184;BQB=0.989575;DP=2438;DP4=1255,1110,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=7.11774e-07;MQSB=0.0762345;RPB=0.823402;SGB=57.786;VDB=0.723817;EFF=UTR_3_PRIME(MODIFIER||59||343|LOC_Os08g29710|protein_coding|CODING|LOC_Os08g29710.1|12|1) FN3499-S.SNP.8:18249104 chr08:018249104 0 W/18249104-18249104 FN3499-S SNP C -> T AC=2;AN=188;BQB=0.929866;DP=2349;DP4=1246,1048,6,8;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.46256e-05;MQSB=0.993575;RPB=0.894221;SGB=58.0655;VDB=0.691523;EFF=UTR_3_PRIME(MODIFIER||59||343|LOC_Os08g29710|protein_coding|CODING|LOC_Os08g29710.1|12|1) FN803-S.SNP.8:18263137 chr08:018263137 0 W/18263137-18263137 FN803-S Single Base Substitution G-A INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN3993-S.SNP.8:18267873 chr08:018267873 0 W/18267873-18267873 FN3993-S SNP G -> C AC=1;AN=168;BQB=0.997736;DP=2519;DP4=1144,1299,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.00781e-05;MQSB=0.764227;RPB=0.994284;SGB=48.4712;VDB=0.982469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atC|M295I|485|LOC_Os08g29730|protein_coding|CODING|LOC_Os08g29730.1|8|1) FN-339.SNP.8:18272390 chr08:018272390 0 W/18272390-18272390 FN-339 Single Base Substitution G-A INTRON HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1330-S.SNP.8:18272485 chr08:018272485 0 W/18272485-18272485 FN1330-S Single Base Substitution G-A INTRON HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1284-S.SNP.8:18273468 chr08:018273468 0 W/18273468-18273468 FN1284-S Single Base Substitution T-C INTRON HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN-359.SNP.8:18273947 chr08:018273947 0 W/18273947-18273947 FN-359 Single Base Substitution G-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1422-S.SNP.8:18273947 chr08:018273947 0 W/18273947-18273947 FN1422-S Single Base Substitution G-A INTERGENIC Homo SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2084-S.SNP.8:18273947 chr08:018273947 0 W/18273947-18273947 FN2084-S SNP G -> A AC=2;AN=168;BQB=0.9974;DP=1396;DP4=193,1158,4,17;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0;MQB=0.00125691;MQSB=0.731225;RPB=0.719963;SGB=11.3448;VDB=0.476893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.8:18273947 chr08:018273947 0 W/18273947-18273947 FN2724-S SNP G -> A AC=2;AN=200;BQB=0.980093;DP=4048;DP4=1133,2692,16,20;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0;MQB=2.94642e-11;MQSB=7.2381e-17;RPB=0.994305;SGB=119.583;VDB=0.368038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.8:18279271 chr08:018279271 0 W/18279271-18279271 FN3417-S SNP T -> A AC=1;AN=184;BQB=0.999557;DP=2887;DP4=1409,1385,16,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.20011e-10;MQSB=0.694885;RPB=0.998014;SGB=89.4385;VDB=0.58672;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.8:18279346 chr08:018279346 0 W/18279346-18279346 FN459-S Single Base Substitution G-A INTERGENIC HET SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN3822-S.SNP.8:18279583 chr08:018279583 0 W/18279583-18279583 FN3822-S SNP A -> T AC=2;AN=190;BQB=0.912492;DP=3173;DP4=1326,1695,9,14;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0286795;MQB=0.415839;MQSB=0.255046;RPB=0.966419;SGB=99.1879;VDB=0.813123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.8:18289949 chr08:018289949 0 W/18289949-18289949 FN1461-S Single Base Substitution T-C INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1461-S.SNP.8:18289951 chr08:018289951 0 W/18289951-18289951 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1446-S.SNP.8:18290605 chr08:018290605 0 W/18290605-18290605 FN1446-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN3095-S.SNP.8:18291228 chr08:018291228 0 W/18291228-18291228 FN3095-S SNP G -> C AC=1;AN=184;BQB=0.928501;DP=2510;DP4=1197,1227,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.40409e-09;MQSB=0.800813;RPB=0.996158;SGB=75.8731;VDB=0.886471;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.8:18291393 chr08:018291393 0 W/18291393-18291393 FN451-S Single Base Substitution C-T INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3430-S.SNP.8:18294746 chr08:018294746 0 W/18294746-18294746 FN3430-S SNP A -> G AC=2;AN=184;BQB=0.823514;DP=2470;DP4=1093,1308,9,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.61964e-13;MQSB=0.999765;RPB=0.266275;SGB=74.4875;VDB=0.022792;EFF=INTRON(MODIFIER||||469|LOC_Os08g29760|protein_coding|CODING|LOC_Os08g29760.1|3|1) FN2600-S.SNP.8:18296314 chr08:018296314 0 W/18296314-18296314 FN2600-S SNP G -> C AC=1;AN=198;BQB=0.842907;DP=4146;DP4=1914,1938,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19236e-15;MQSB=0.773674;RPB=0.3959;SGB=-6.69434;VDB=0.250508;EFF=INTRON(MODIFIER||||469|LOC_Os08g29760|protein_coding|CODING|LOC_Os08g29760.1|8|1) FN3521-S.SNP.8:18297232 chr08:018297232 0 W/18297232-18297232 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.967885;DP=2545;DP4=1310,1154,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.98343e-06;MQSB=0.433042;RPB=0.561233;SGB=39.8925;VDB=0.248437;EFF=INTRON(MODIFIER||||469|LOC_Os08g29760|protein_coding|CODING|LOC_Os08g29760.1|10|1) FN3632-S.SNP.8:18297682 chr08:018297682 0 W/18297682-18297682 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.832181;DP=2803;DP4=1401,1298,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.04957e-10;MQSB=0.991244;RPB=0.857294;SGB=43.2083;VDB=0.614624;EFF=INTRON(MODIFIER||||469|LOC_Os08g29760|protein_coding|CODING|LOC_Os08g29760.1|10|1) FN2349.SNP.8:18298714 chr08:018298714 0 W/18298714-18298714 FN2349 SNP C -> T AC=2;AN=192;BQB=0.509297;DP=4459;DP4=2177,1996,26,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.85494e-27;MQSB=0.820129;RPB=0.566293;SGB=203.74;VDB=0.88041;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L436|469|LOC_Os08g29760|protein_coding|CODING|LOC_Os08g29760.1|12|1) FN1529-S.SNP.8:18299962 chr08:018299962 0 W/18299962-18299962 FN1529-S Single Base Substitution T-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1499-S.SNP.8:18300754 chr08:018300754 0 W/18300754-18300754 FN1499-S Single Base Substitution A-T INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN_1017-1.SNP.8:18314362 chr08:018314362 0 W/18314362-18314362 FN_1017-1 Single Base Substitution C-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN-274.SNP.8:18323289 chr08:018323289 0 W/18323289-18323289 FN-274 Single Base Substitution G-A INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN941-S.SNP.8:18323858 chr08:018323858 0 W/18323858-18323858 FN941-S Single Base Substitution A-C INTRON HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN-127.SNP.8:18340786 chr08:018340786 0 W/18340786-18340786 FN-127 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g29840 retrotransposon protein, putative, unclassified, expressed SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1556-S.SNP.8:18347535 chr08:018347535 0 W/18347535-18347535 FN1556-S Single Base Substitution C-A INTRON Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN4167-S.SNP.8:18349705 chr08:018349705 0 W/18349705-18349705 FN4167-S SNP C -> A AC=2;AN=170;BQB=0.754799;DP=2716;DP4=1264,1349,9,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.92565e-14;MQSB=0.985269;RPB=0.471969;SGB=101.184;VDB=0.981381;EFF=INTRON(MODIFIER||||974|LOC_Os08g29854|protein_coding|CODING|LOC_Os08g29854.1|1|1) FN996-S.SNP.8:18353006 chr08:018353006 0 W/18353006-18353006 FN996-S Single Base Substitution C-T INTRON HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1073-S.SNP.8:18353544 chr08:018353544 0 W/18353544-18353544 FN1073-S Single Base Substitution G-A INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN590-S.SNP.8:18356165 chr08:018356165 0 W/18356165-18356165 FN590-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g29854 RGH1A, putative, expressed SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN4001-S.SNP.8:18372549 chr08:018372549 0 W/18372549-18372549 FN4001-S SNP C -> T AC=1;AN=168;BQB=0.4369;DP=2672;DP4=1032,1566,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00522221;MQSB=0.988069;RPB=0.929735;SGB=21.0249;VDB=0.045327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.8:18373278 chr08:018373278 0 W/18373278-18373278 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.935613;DP=4337;DP4=1829,2275,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.52149e-09;MQSB=0.998446;RPB=0.503246;SGB=26.7492;VDB=0.278729;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.8:18373669 chr08:018373669 0 W/18373669-18373669 FN918-S Single Base Substitution G-T INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3627-S.SNP.8:18374537 chr08:018374537 0 W/18374537-18374537 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.511634;DP=2723;DP4=1514,1081,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.0002e-05;MQSB=0.756857;RPB=0.536631;SGB=44.5415;VDB=0.890581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.8:18375980 chr08:018375980 0 W/18375980-18375980 FN1535-S Single Base Substitution A-T INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN4188-S.SNP.8:18376167 chr08:018376167 0 W/18376167-18376167 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.999417;DP=2645;DP4=1299,1230,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.0752e-10;MQSB=0.992285;RPB=0.581652;SGB=83.4133;VDB=0.890163;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.8:18376393 chr08:018376393 0 W/18376393-18376393 FN601-S Single Base Substitution C-A INTERGENIC HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3849-S.SNP.8:18376473 chr08:018376473 0 W/18376473-18376473 FN3849-S SNP T -> A AC=1;AN=158;BQB=0.518372;DP=2369;DP4=1044,1170,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.49001e-06;MQSB=0.897891;RPB=0.482088;SGB=16.7104;VDB=0.937866;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.8:18377744 chr08:018377744 0 W/18377744-18377744 FN880-S Single Base Substitution G-A INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3353-S.SNP.8:18378642 chr08:018378642 0 W/18378642-18378642 FN3353-S SNP G -> T AC=1;AN=184;BQB=0.921738;DP=2701;DP4=1305,1293,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.96362e-07;MQSB=0.90117;RPB=0.998229;SGB=39.699;VDB=0.240287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V85F|247|LOC_Os08g29910|protein_coding|CODING|LOC_Os08g29910.1|3|1) FN3353-S.SNP.8:18378644 chr08:018378644 0 W/18378644-18378644 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.977746;DP=2714;DP4=1321,1281,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.9442e-07;MQSB=0.949519;RPB=0.998108;SGB=39.699;VDB=0.242987;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V85|247|LOC_Os08g29910|protein_coding|CODING|LOC_Os08g29910.1|3|1) FN3967-S.SNP.8:18386769 chr08:018386769 0 W/18386769-18386769 FN3967-S SNP C -> G AC=2;AN=182;BQB=0.971739;DP=4113;DP4=1528,2431,21,40;HOB=0.0217365;ICB=0.494567;MQ=41;MQ0F=0.0627279;MQB=3.41842e-08;MQSB=0;RPB=0.834931;SGB=204.149;VDB=0.312917;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgC|W1500C|1995|LOC_Os08g29930|protein_coding|CODING|LOC_Os08g29930.1|3|1) FN-174.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN-174 Single Base Substitution G-C INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-399.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN-399 Single Base Substitution G-C INTERGENIC HOMO SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2460.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN2460 SNP G -> C AC=2;AN=200;BQB=0.558354;DP=4353;DP4=2100,2044,19,26;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00229727;MQB=2.14896e-20;MQSB=0.0050261;RPB=0.994231;SGB=201.63;VDB=0.0991064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN2671-S SNP G -> C AC=2;AN=200;BQB=0.785131;DP=4540;DP4=2188,2121,9,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00242291;MQB=2.28139e-15;MQSB=0.451867;RPB=0.317334;SGB=94.3471;VDB=0.235108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN2782-S SNP G -> C AC=2;AN=198;BQB=0.15061;DP=3905;DP4=1847,1842,25,33;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00230474;MQB=1.30479e-23;MQSB=0.0179735;RPB=0.323742;SGB=188.178;VDB=0.619833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN3565-S SNP G -> C AC=1;AN=188;BQB=0.968926;DP=3142;DP4=1514,1575,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000636537;MQB=2.96416e-09;MQSB=0.195492;RPB=0.999912;SGB=71.6954;VDB=0.82996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN3987-S SNP G -> C AC=2;AN=168;BQB=0.999704;DP=2607;DP4=1281,1219,18,20;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00115075;MQB=2.60617e-17;MQSB=0.809168;RPB=0.930161;SGB=120.518;VDB=0.7505;EFF=INTERGENIC(MODIFIER||||||||||1) FN4103-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN4103-S SNP G -> C AC=1;AN=180;BQB=0.941128;DP=2737;DP4=1358,1333,2,8;HOB=6.17284e-05;ICB=0.000124143;MQ=48;MQ0F=0.00109609;MQB=0.00021817;MQSB=0.0206618;RPB=0.991215;SGB=25.0952;VDB=0.817121;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN491-S Single Base Substitution G-C INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN786-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN786-S Single Base Substitution G-C INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN930-S.SNP.8:18391490 chr08:018391490 0 W/18391490-18391490 FN930-S Single Base Substitution G-C INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2478.SNP.8:18391676 chr08:018391676 0 W/18391676-18391676 FN2478 SNP T -> C AC=2;AN=200;BQB=0.980801;DP=4359;DP4=1835,1847,20,26;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000917642;MQB=3.14954e-15;MQSB=0.391348;RPB=0.920472;SGB=3.83453;VDB=0.242921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.8:18398595 chr08:018398595 0 W/18398595-18398595 FN2374 SNP G -> A AC=1;AN=192;BQB=0.454239;DP=5003;DP4=2674,1950,15,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.92738e-08;MQSB=0.902355;RPB=0.902131;SGB=61.1661;VDB=0.319249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S78N|184|LOC_Os08g29950|protein_coding|CODING|LOC_Os08g29950.1|1|1) FN1445-S.SNP.8:18399795 chr08:018399795 0 W/18399795-18399795 FN1445-S Single Base Substitution C-A INTRON HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN1504-S.SNP.8:18401683 chr08:018401683 0 W/18401683-18401683 FN1504-S Single Base Substitution A-T INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN4204-S.SNP.8:18407473 chr08:018407473 0 W/18407473-18407473 FN4204-S SNP A -> T AC=1;AN=170;BQB=0.95609;DP=2583;DP4=1153,1333,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.22532e-07;MQSB=0.996197;RPB=0.749349;SGB=43.4296;VDB=0.778936;EFF=INTRON(MODIFIER||||159|LOC_Os08g29970|protein_coding|CODING|LOC_Os08g29970.1|4|1) FN1045-S.SNP.8:18415331 chr08:018415331 0 W/18415331-18415331 FN1045-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g29980 retrotransposon protein, putative, unclassified, expressed SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2312.SNP.8:18416771 chr08:018416771 0 W/18416771-18416771 FN2312 SNP C -> T AC=1;AN=192;BQB=0.0187859;DP=14748;DP4=7051,6750,20,28;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=0.000873999;MQSB=0.381816;RPB=0.999101;SGB=-259.505;VDB=0.97417;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A892T|1453|LOC_Os08g29980|protein_coding|CODING|LOC_Os08g29980.1|1|1) FN689-S.SNP.8:18419223 chr08:018419223 0 W/18419223-18419223 FN689-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1401-S.SNP.8:18427223 chr08:018427223 0 W/18427223-18427223 FN1401-S Single Base Substitution C-T INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1014-S.SNP.8:18427974 chr08:018427974 0 W/18427974-18427974 FN1014-S Single Base Substitution G-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1014-S.SNP.8:18427975 chr08:018427975 0 W/18427975-18427975 FN1014-S Single Base Substitution A-G INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1583-S.SNP.8:18429043 chr08:018429043 0 W/18429043-18429043 FN1583-S Single Base Substitution G-C INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1470-S.SNP.8:18434902 chr08:018434902 0 W/18434902-18434902 FN1470-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g30010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN4172-S.SNP.8:18437571 chr08:018437571 0 W/18437571-18437571 FN4172-S SNP G -> A AC=1;AN=170;BQB=0.950294;DP=3197;DP4=1723,1399,5,12;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0462934;MQB=0.644908;MQSB=0.00130774;RPB=0.721667;SGB=70.0854;VDB=0.120057;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1512|1802|LOC_Os08g30010|protein_coding|CODING|LOC_Os08g30010.1|3|1) FN4070-S.SNP.8:18444722 chr08:018444722 0 W/18444722-18444722 FN4070-S SNP G -> C AC=1;AN=180;BQB=0.875104;DP=2797;DP4=1371,1341,10,13;HOB=6.17284e-05;ICB=0.000124143;MQ=46;MQ0F=0;MQB=0.000110893;MQSB=0.515788;RPB=0.649668;SGB=70.7363;VDB=0.249093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.8:18445961 chr08:018445961 0 W/18445961-18445961 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.398745;DP=4272;DP4=1915,2152,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234082;MQB=2.56693e-05;MQSB=0.516709;RPB=0.458859;SGB=18.5788;VDB=0.476212;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.8:18448745 chr08:018448745 0 W/18448745-18448745 FN4275-S SNP T -> G AC=2;AN=170;BQB=0.996059;DP=2299;DP4=1027,1157,15,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.03482e-15;MQSB=0.987329;RPB=0.850169;SGB=114.512;VDB=0.184972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.8:18450654 chr08:018450654 0 W/18450654-18450654 FN3390-S SNP C -> A AC=1;AN=184;BQB=0.967655;DP=3251;DP4=1899,1278,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00123039;MQB=1.9974e-06;MQSB=0.949867;RPB=0.606156;SGB=25.1826;VDB=0.675225;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.8:18452807 chr08:018452807 0 W/18452807-18452807 FN451-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1029-S.SNP.8:18463592 chr08:018463592 0 W/18463592-18463592 FN1029-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g30040 transposon protein, putative, unclassified, expressed SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1661-S.SNP.8:18467296 chr08:018467296 0 W/18467296-18467296 FN1661-S Single Base Substitution G-C INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN4229-S.SNP.8:18474471 chr08:018474471 0 W/18474471-18474471 FN4229-S SNP A -> G AC=2;AN=170;BQB=0.503361;DP=2805;DP4=1433,1263,6,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.09264e-09;MQSB=0.80526;RPB=0.685745;SGB=58.9766;VDB=0.871941;EFF=INTRON(MODIFIER||||621|LOC_Os08g30060|protein_coding|CODING|LOC_Os08g30060.2|1|1),INTRON(MODIFIER||||621|LOC_Os08g30060|protein_coding|CODING|LOC_Os08g30060.1|1|1) FN1327-S.SNP.8:18482938 chr08:018482938 0 W/18482938-18482938 FN1327-S Single Base Substitution T-A INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3554-S.SNP.8:18483821 chr08:018483821 0 W/18483821-18483821 FN3554-S SNP C -> A AC=1;AN=188;BQB=0.964691;DP=2778;DP4=1376,1328,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26029e-08;MQSB=0.995415;RPB=0.717437;SGB=62.6088;VDB=0.50667;EFF=INTRON(MODIFIER||||673|LOC_Os08g30070|protein_coding|CODING|LOC_Os08g30070.1|2|1) FN4105-S.SNP.8:18486324 chr08:018486324 0 W/18486324-18486324 FN4105-S SNP T -> A AC=1;AN=180;BQB=0.0968691;DP=3517;DP4=1592,1447,8,8;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=5.49869e-07;MQSB=0.812895;RPB=0.631498;SGB=-97.3772;VDB=0.966381;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S95|673|LOC_Os08g30070|protein_coding|CODING|LOC_Os08g30070.1|1|1) FN722-S.SNP.8:18487653 chr08:018487653 0 W/18487653-18487653 FN722-S Single Base Substitution C-G INTERGENIC HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN1079-S.SNP.8:18495401 chr08:018495401 0 W/18495401-18495401 FN1079-S Single Base Substitution C-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3768-S.SNP.8:18499795 chr08:018499795 0 W/18499795-18499795 FN3768-S SNP G -> T AC=2;AN=190;BQB=0.853348;DP=2357;DP4=816,1442,10,16;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.20647e-07;MQSB=9.01763e-08;RPB=0.344002;SGB=82.301;VDB=0.328069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.8:18509626 chr08:018509626 0 W/18509626-18509626 FN2492 SNP G -> T AC=1;AN=200;BQB=0.407086;DP=3763;DP4=1675,1627,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0678e-06;MQSB=0.961254;RPB=0.011088;SGB=19.0642;VDB=0.0706537;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G168|374|LOC_Os08g30100|protein_coding|CODING|LOC_Os08g30100.1|1|1) FN1097-S.SNP.8:18515323 chr08:018515323 0 W/18515323-18515323 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1532-S.SNP.8:18524635 chr08:018524635 0 W/18524635-18524635 FN1532-S Single Base Substitution C-A INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1679-S.SNP.8:18526655 chr08:018526655 0 W/18526655-18526655 FN1679-S SNP C -> T AC=2;AN=188;BQB=0.535169;DP=757;DP4=316,402,4,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.00360095;MQSB=0.768651;RPB=0.995316;SGB=25.3545;VDB=0.112814;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.8:18529424 chr08:018529424 0 W/18529424-18529424 FN503-S Single Base Substitution G-A INTERGENIC HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2353.SNP.8:18529740 chr08:018529740 0 W/18529740-18529740 FN2353 SNP A -> T AC=2;AN=192;BQB=0.993608;DP=5120;DP4=2202,2599,20,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.48472e-28;MQSB=0.984866;RPB=0.983928;SGB=-51.0113;VDB=0.545551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.8:18530802 chr08:018530802 0 W/18530802-18530802 FN3861-S SNP C -> T AC=1;AN=158;BQB=0.914087;DP=2392;DP4=1169,1129,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00041806;MQB=0.00151578;MQSB=0.806615;RPB=0.981782;SGB=27.3346;VDB=0.988813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.8:18534959 chr08:018534959 0 W/18534959-18534959 FN1180-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3396-S.SNP.8:18539454 chr08:018539454 0 W/18539454-18539454 FN3396-S SNP C -> A AC=2;AN=184;BQB=0.999993;DP=3475;DP4=1664,1671,25,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.60977e-24;MQSB=0.222212;RPB=0.614593;SGB=151.967;VDB=0.564838;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G114*|212|LOC_Os08g30140|protein_coding|CODING|LOC_Os08g30140.1|2|1);LOF=(LOC_Os08g30140|LOC_Os08g30140|1|1.00);NMD=(LOC_Os08g30140|LOC_Os08g30140|1|1.00) FN1553-S.SNP.8:18541250 chr08:018541250 0 W/18541250-18541250 FN1553-S Single Base Substitution T-G INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN632-S.SNP.8:18541575 chr08:018541575 0 W/18541575-18541575 FN632-S Single Base Substitution T-C INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1120-S.SNP.8:18548874 chr08:018548874 0 W/18548874-18548874 FN1120-S Single Base Substitution A-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2630-S.SNP.8:18553728 chr08:018553728 0 W/18553728-18553728 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.180129;DP=4218;DP4=1572,1878,15,18;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00521574;MQB=0.00147021;MQSB=0.00732145;RPB=0.429518;SGB=-154.433;VDB=0.602969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.8:18554245 chr08:018554245 0 W/18554245-18554245 FN1448-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g30180 transposon protein, putative, unclassified, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN4119-S.SNP.8:18556674 chr08:018556674 0 W/18556674-18556674 FN4119-S SNP G -> A AC=2;AN=182;BQB=0.999886;DP=3500;DP4=1690,1734,10,10;HOB=0.0217365;ICB=0.494567;MQ=33;MQ0F=0.0957143;MQB=0.0827079;MQSB=1.24362e-13;RPB=0.919759;SGB=60.2037;VDB=0.835315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.8:18559385 chr08:018559385 0 W/18559385-18559385 FN2723-S SNP C -> A AC=1;AN=200;BQB=0.673592;DP=4460;DP4=1854,2347,10,6;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0197309;MQB=0.0733757;MQSB=0.244611;RPB=0.991085;SGB=26.8797;VDB=0.0162537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F397L|1201|LOC_Os08g30190|protein_coding|CODING|LOC_Os08g30190.1|2|1) FN565-S.SNP.8:18560232 chr08:018560232 0 W/18560232-18560232 FN565-S Single Base Substitution A-T INTRON HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN1227-S.SNP.8:18562690 chr08:018562690 0 W/18562690-18562690 FN1227-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g30200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN2241-S.SNP.8:18563046 chr08:018563046 0 W/18563046-18563046 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.987009;DP=4788;DP4=2450,1951,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00313283;MQB=3.38039e-05;MQSB=0.438756;RPB=0.133002;SGB=16.5421;VDB=0.571866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y293N|405|LOC_Os08g30200|protein_coding|CODING|LOC_Os08g30200.1|1|1) FN2485.SNP.8:18565123 chr08:018565123 0 W/18565123-18565123 FN2485 SNP C -> A AC=2;AN=200;BQB=0.753454;DP=4829;DP4=2019,2593,19,23;HOB=0.0198;ICB=0.495051;MQ=35;MQ0F=0.093187;MQB=0.0053281;MQSB=1.17636e-28;RPB=0.413985;SGB=48.014;VDB=0.495056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.8:18571029 chr08:018571029 0 W/18571029-18571029 FN2492 SNP G -> A AC=1;AN=200;BQB=0.308483;DP=4335;DP4=2112,1974,8,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=8.63228e-07;MQSB=0.740022;RPB=0.581464;SGB=43.8747;VDB=0.477144;EFF=INTERGENIC(MODIFIER||||||||||1) FN707-S.SNP.8:18572031 chr08:018572031 0 W/18572031-18572031 FN707-S Single Base Substitution T-C INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN466-S.SNP.8:18572432 chr08:018572432 0 W/18572432-18572432 FN466-S Single Base Substitution C-T INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN2591-S.SNP.8:18575537 chr08:018575537 0 W/18575537-18575537 FN2591-S SNP C -> A AC=1;AN=186;BQB=0.948686;DP=3028;DP4=1561,1271,8,6;HOB=5.78101e-05;ICB=0.000116242;MQ=36;MQ0F=0.0184941;MQB=0.311779;MQSB=0.150175;RPB=0.0362321;SGB=40.149;VDB=0.0891377;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D78Y|193|LOC_Os08g30220|protein_coding|CODING|LOC_Os08g30220.1|2|1) FN906-S.SNP.8:18587653 chr08:018587653 0 W/18587653-18587653 FN906-S Single Base Substitution C-T INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2470.SNP.8:18590535 chr08:018590535 0 W/18590535-18590535 FN2470 SNP T -> C AC=1;AN=200;BQB=0.941343;DP=4678;DP4=2410,1917,10,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000213767;MQB=1.13954e-09;MQSB=0.00145227;RPB=0.200659;SGB=42.5108;VDB=0.871267;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.8:18591928 chr08:018591928 0 W/18591928-18591928 FN760-S Single Base Substitution G-A INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN507-S.SNP.8:18596181 chr08:018596181 0 W/18596181-18596181 FN507-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g30250 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN507-S.SNP.8:18596182 chr08:018596182 0 W/18596182-18596182 FN507-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN3615-S.SNP.8:18605288 chr08:018605288 0 W/18605288-18605288 FN3615-S SNP A -> G AC=2;AN=190;BQB=0.915524;DP=2334;DP4=1303,855,13,8;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.69774e-12;MQSB=0.0953417;RPB=0.00848782;SGB=64.5316;VDB=0.0255126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.8:18606063 chr08:018606063 0 W/18606063-18606063 FN3710-S SNP T -> G AC=2;AN=190;BQB=0.999122;DP=2957;DP4=1334,1434,16,15;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=8.69398e-10;MQSB=0.00566568;RPB=0.405325;SGB=64.5217;VDB=0.12146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.8:18606162 chr08:018606162 0 W/18606162-18606162 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.987438;DP=2751;DP4=1265,1371,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75667e-12;MQSB=0.978699;RPB=0.95203;SGB=68.0854;VDB=0.866491;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.8:18607040 chr08:018607040 0 W/18607040-18607040 FN-199 Single Base Substitution C-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN367-S.SNP.8:18613190 chr08:018613190 0 W/18613190-18613190 FN367-S Single Base Substitution A-T INTERGENIC HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3832-S.SNP.8:18619186 chr08:018619186 0 W/18619186-18619186 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.468133;DP=2723;DP4=1210,1439,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.024238;MQB=0.0791;MQSB=0.0881072;RPB=0.999494;SGB=43.2083;VDB=0.674156;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.8:18620078 chr08:018620078 0 W/18620078-18620078 FN685-S Single Base Substitution C-T INTRON HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2180-S.SNP.8:18620097 chr08:018620097 0 W/18620097-18620097 FN2180-S SNP G -> A AC=1;AN=190;BQB=0.457746;DP=5228;DP4=2462,2453,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0422724;MQB=0.00451894;MQSB=2.5259e-14;RPB=0.996557;SGB=36.1006;VDB=0.9976;EFF=INTRON(MODIFIER||||276|LOC_Os08g30270|protein_coding|CODING|LOC_Os08g30270.1|6|1) FN2556-S.SNP.8:18623700 chr08:018623700 0 W/18623700-18623700 FN2556-S SNP C -> T AC=2;AN=198;BQB=0.164595;DP=4518;DP4=2156,2092,15,35;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.3868e-24;MQSB=0.672097;RPB=0.838839;SGB=224.163;VDB=0.832182;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.8:18627322 chr08:018627322 0 W/18627322-18627322 FN-203 Single Base Substitution T-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-178.SNP.8:18628366 chr08:018628366 0 W/18628366-18628366 FN-178 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3815-S.SNP.8:18628528 chr08:018628528 0 W/18628528-18628528 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.708542;DP=2236;DP4=1016,1138,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00220674;MQSB=0.999636;RPB=0.215773;SGB=30.8803;VDB=0.27538;EFF=INTRON(MODIFIER||||272|LOC_Os08g30280|protein_coding|CODING|LOC_Os08g30280.1|5|1) FN2562-S.SNP.8:18632145 chr08:018632145 0 W/18632145-18632145 FN2562-S SNP G -> T AC=1;AN=198;BQB=0.706793;DP=4153;DP4=1881,2012,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00288948;MQB=1.98091e-05;MQSB=0.485265;RPB=0.809324;SGB=-7.28946;VDB=0.899739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.8:18635102 chr08:018635102 0 W/18635102-18635102 FN1287-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3524-S.SNP.8:18643401 chr08:018643401 0 W/18643401-18643401 FN3524-S SNP C -> T AC=2;AN=188;BQB=0.786903;DP=2893;DP4=1495,1312,12,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00311096;MQB=5.61488e-14;MQSB=0.619516;RPB=0.643887;SGB=117.128;VDB=0.0296199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.8:18644473 chr08:018644473 0 W/18644473-18644473 FN2362 SNP T -> C AC=1;AN=192;BQB=0.977237;DP=4579;DP4=2195,2076,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00305744;MQB=1.573e-09;MQSB=0.098402;RPB=0.796182;SGB=81.1609;VDB=0.591767;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.8:18644761 chr08:018644761 0 W/18644761-18644761 FN3948-S SNP C -> A AC=1;AN=168;BQB=0.670008;DP=2407;DP4=1168,1128,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000415455;MQB=7.66813e-15;MQSB=0.903116;RPB=0.817052;SGB=99.9335;VDB=0.379643;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.8:18646147 chr08:018646147 0 W/18646147-18646147 FN1535-S Single Base Substitution A-G INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN_812-4-1.SNP.8:18647200 chr08:018647200 0 W/18647200-18647200 FN_812-4-1 Single Base Substitution T-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN3785-S.SNP.8:18647692 chr08:018647692 0 W/18647692-18647692 FN3785-S SNP T -> C AC=2;AN=190;BQB=0.901702;DP=2564;DP4=1111,1353,3,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14156e-08;MQSB=0.941597;RPB=0.948988;SGB=71.8647;VDB=0.661409;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.8:18648931 chr08:018648931 0 W/18648931-18648931 FN1673-S SNP G -> T AC=2;AN=188;BQB=0.612287;DP=3410;DP4=1581,1735,24,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.10839e-16;MQSB=0.996907;RPB=0.248639;SGB=-0.874095;VDB=0.601403;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.8:18653741 chr08:018653741 0 W/18653741-18653741 FN1456-S Single Base Substitution C-A INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2357.SNP.8:18655787 chr08:018655787 0 W/18655787-18655787 FN2357 SNP C -> A AC=1;AN=192;BQB=0.606963;DP=4725;DP4=2396,2099,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.1379e-07;MQSB=0.259195;RPB=0.993652;SGB=7.3548;VDB=0.319005;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.8:18660253 chr08:018660253 0 W/18660253-18660253 FN497-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3542-S.SNP.8:18661180 chr08:018661180 0 W/18661180-18661180 FN3542-S SNP T -> C AC=2;AN=188;BQB=0.998117;DP=3054;DP4=1518,1436,10,7;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=1.3945e-06;MQSB=0.489067;RPB=0.161626;SGB=50.1574;VDB=0.128698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.8:18666551 chr08:018666551 0 W/18666551-18666551 FN3730-S SNP T -> G AC=2;AN=190;BQB=0.675068;DP=2375;DP4=1261,1020,18,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.62048e-22;MQSB=0.734834;RPB=0.932154;SGB=162.065;VDB=0.853858;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R465|697|LOC_Os08g30330|protein_coding|CODING|LOC_Os08g30330.1|6|1) FN1731-S.SNP.8:18667313 chr08:018667313 0 W/18667313-18667313 FN1731-S SNP C -> A AC=1;AN=188;BQB=0.995329;DP=1601;DP4=153,1364,1,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.58455e-07;MQSB=0.823489;RPB=0.998582;SGB=35.9843;VDB=0.117656;EFF=INTRON(MODIFIER||||697|LOC_Os08g30330|protein_coding|CODING|LOC_Os08g30330.1|5|1) FN1731-S.SNP.8:18667314 chr08:018667314 0 W/18667314-18667314 FN1731-S SNP G -> A AC=1;AN=188;BQB=0.137599;DP=1605;DP4=149,1362,3,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.05064e-05;MQSB=0.678573;RPB=0.99065;SGB=-14.9998;VDB=0.330186;EFF=INTRON(MODIFIER||||697|LOC_Os08g30330|protein_coding|CODING|LOC_Os08g30330.1|5|1) FN3342-S.SNP.8:18669673 chr08:018669673 0 W/18669673-18669673 FN3342-S SNP G -> A AC=1;AN=184;BQB=0.995347;DP=3119;DP4=1647,1350,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.98218e-11;MQSB=0.999645;RPB=0.99256;SGB=84.9167;VDB=0.619781;EFF=INTRON(MODIFIER||||697|LOC_Os08g30330|protein_coding|CODING|LOC_Os08g30330.1|1|1) FN1726-S.SNP.8:18679556 chr08:018679556 0 W/18679556-18679556 FN1726-S SNP A -> T AC=2;AN=188;BQB=0.420085;DP=3424;DP4=1819,1542,30,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.18525e-21;MQSB=0.985986;RPB=0.659301;SGB=-160.142;VDB=0.228964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.8:18683015 chr08:018683015 0 W/18683015-18683015 FN2309 SNP C -> T AC=1;AN=192;BQB=0.772923;DP=4082;DP4=1833,1917,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.18815e-11;MQSB=8.54595e-06;RPB=0.672601;SGB=-11.3826;VDB=0.876495;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.8:18686957 chr08:018686957 0 W/18686957-18686957 FN3839-S SNP C -> A AC=1;AN=190;BQB=0.848272;DP=2540;DP4=1203,1205,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.5325e-08;MQSB=0.430143;RPB=0.349344;SGB=53.6492;VDB=0.824196;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.8:18688770 chr08:018688770 0 W/18688770-18688770 FN-407 Single Base Substitution G-A INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN2454.SNP.8:18695525 chr08:018695525 0 W/18695525-18695525 FN2454 SNP C -> A AC=2;AN=200;BQB=0.0088276;DP=4316;DP4=2169,1936,13,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.78581e-11;MQSB=0.365531;RPB=0.912937;SGB=69.1109;VDB=0.809032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.8:18696509 chr08:018696509 0 W/18696509-18696509 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.529436;DP=2525;DP4=1119,1326,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00435644;MQB=0.00419164;MQSB=0.511677;RPB=0.49974;SGB=44.4357;VDB=0.614683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.8:18700711 chr08:018700711 0 W/18700711-18700711 FN2765-S SNP T -> G AC=2;AN=198;BQB=0.368497;DP=4700;DP4=1917,2548,19,27;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00255319;MQB=1.48222e-20;MQSB=0.775001;RPB=0.639858;SGB=104.603;VDB=0.0630928;EFF=INTRON(MODIFIER||||1029|LOC_Os08g30400|protein_coding|CODING|LOC_Os08g30400.1|3|1) FN2673-S.SNP.8:18701274 chr08:018701274 0 W/18701274-18701274 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.749554;DP=5022;DP4=2472,2357,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26121e-14;MQSB=0.990635;RPB=0.21832;SGB=23.9365;VDB=0.793238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L743P|1029|LOC_Os08g30400|protein_coding|CODING|LOC_Os08g30400.1|4|1) FN2399.SNP.8:18705606 chr08:018705606 0 W/18705606-18705606 FN2399 SNP C -> T AC=2;AN=200;BQB=0.932596;DP=4369;DP4=2047,2030,13,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.43446e-15;MQSB=0.932587;RPB=0.965795;SGB=87.1368;VDB=0.383626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.8:18705610 chr08:018705610 0 W/18705610-18705610 FN2399 SNP C -> T AC=2;AN=200;BQB=0.481971;DP=4388;DP4=2046,2063,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.66547e-15;MQSB=0.923887;RPB=0.732928;SGB=83.5316;VDB=0.212226;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.8:18709670 chr08:018709670 0 W/18709670-18709670 FN730-S Single Base Substitution C-A INTERGENIC HOMO SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN545-S.SNP.8:18710074 chr08:018710074 0 W/18710074-18710074 FN545-S Single Base Substitution G-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN420-S.SNP.8:18713464 chr08:018713464 0 W/18713464-18713464 FN420-S Single Base Substitution T-A INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2333.SNP.8:18725648 chr08:018725648 0 W/18725648-18725648 FN2333 SNP A -> T AC=1;AN=192;BQB=0.813642;DP=5174;DP4=2353,2482,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.40586e-17;MQSB=0.98769;RPB=0.994243;SGB=122.24;VDB=0.373166;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.8:18727352 chr08:018727352 0 W/18727352-18727352 FN4155-S SNP C -> G AC=2;AN=170;BQB=0.817811;DP=2312;DP4=1108,1135,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.06371e-10;MQSB=0.970579;RPB=0.998875;SGB=78.9707;VDB=0.425783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.8:18729777 chr08:018729777 0 W/18729777-18729777 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3306-S.SNP.8:18734116 chr08:018734116 0 W/18734116-18734116 FN3306-S SNP A -> G AC=1;AN=184;BQB=0.271969;DP=2941;DP4=1279,1480,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000502664;MQSB=0.574918;RPB=0.999874;SGB=-2.32838;VDB=0.30917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.8:18743498 chr08:018743498 0 W/18743498-18743498 FN1115-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g30450 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN491-S.SNP.8:18744425 chr08:018744425 0 W/18744425-18744425 FN491-S Single Base Substitution G-A INTRON HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN943-S.SNP.8:18747411 chr08:018747411 0 W/18747411-18747411 FN943-S Single Base Substitution C-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN2388.SNP.8:18750029 chr08:018750029 0 W/18750029-18750029 FN2388 SNP G -> A AC=1;AN=200;BQB=0.861067;DP=3346;DP4=2108,1095,9,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.99973e-08;MQSB=4.68391e-06;RPB=0.713403;SGB=32.0901;VDB=0.883343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G100S|188|LOC_Os08g30460|protein_coding|CODING|LOC_Os08g30460.1|1|1) FN2357.SNP.8:18750336 chr08:018750336 0 W/18750336-18750336 FN2357 SNP C -> T AC=1;AN=192;BQB=0.0256649;DP=4216;DP4=1716,1876,8,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.17658e-10;MQSB=9.47695e-06;RPB=0.508433;SGB=-10.2539;VDB=0.0772068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.8:18750945 chr08:018750945 0 W/18750945-18750945 FN2442 SNP T -> G AC=1;AN=200;BQB=0.767681;DP=4267;DP4=2344,1679,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000234357;MQB=8.69213e-05;MQSB=0.27477;RPB=0.701076;SGB=-1.74624;VDB=0.0777677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.8:18756954 chr08:018756954 0 W/18756954-18756954 FN1651-S Single Base Substitution T-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2181-S.SNP.8:18777246 chr08:018777246 0 W/18777246-18777246 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.105155;DP=4283;DP4=2322,1711,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000233481;MQB=3.76013e-08;MQSB=0.925807;RPB=0.245457;SGB=43.2083;VDB=0.443024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D55N|502|LOC_Os08g30520|protein_coding|CODING|LOC_Os08g30520.1|2|1) FN2102-S.SNP.8:18778790 chr08:018778790 0 W/18778790-18778790 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.0653117;DP=3347;DP4=2140,1150,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.11099e-08;MQSB=0.999823;RPB=0.960443;SGB=-41.7816;VDB=0.835504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.8:18781364 chr08:018781364 0 W/18781364-18781364 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.904556;DP=3005;DP4=1421,1510,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52362e-07;MQSB=0.966152;RPB=0.955341;SGB=28.8977;VDB=0.808623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.8:18783093 chr08:018783093 0 W/18783093-18783093 FN2300 SNP G -> A AC=1;AN=192;BQB=0.42739;DP=4146;DP4=2121,1816,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26388e-08;MQSB=0.273585;RPB=0.945293;SGB=36.2157;VDB=0.208746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.8:18783095 chr08:018783095 0 W/18783095-18783095 FN2300 SNP C -> T AC=1;AN=192;BQB=0.696431;DP=4167;DP4=2049,1797,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.68017e-07;MQSB=0.272084;RPB=0.612658;SGB=-35.7635;VDB=0.509204;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.8:18783419 chr08:018783419 0 W/18783419-18783419 FN3535-S SNP A -> T AC=1;AN=188;BQB=0.988164;DP=2642;DP4=1472,1065,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.03281e-08;MQSB=0.997765;RPB=0.548518;SGB=-0.634963;VDB=0.758664;EFF=INTERGENIC(MODIFIER||||||||||1) FN921-S.SNP.8:18784827 chr08:018784827 0 W/18784827-18784827 FN921-S Single Base Substitution G-T INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN3913-S.SNP.8:18785311 chr08:018785311 0 W/18785311-18785311 FN3913-S SNP A -> G AC=1;AN=158;BQB=0.997134;DP=2183;DP4=1084,976,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.18674e-08;MQSB=0.996785;RPB=0.899343;SGB=34.0735;VDB=0.109379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.8:18789840 chr08:018789840 0 W/18789840-18789840 FN1056-S Single Base Substitution A-T INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN-233.SNP.8:18791528 chr08:018791528 0 W/18791528-18791528 FN-233 Single Base Substitution T-C INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2678-S.SNP.8:18795157 chr08:018795157 0 W/18795157-18795157 FN2678-S SNP C -> T AC=2;AN=198;BQB=0.438686;DP=4689;DP4=2065,2284,13,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.91498e-21;MQSB=0.994385;RPB=0.0802913;SGB=123.188;VDB=0.0120025;EFF=INTERGENIC(MODIFIER||||||||||1) FN789-S.SNP.8:18798998 chr08:018798998 0 W/18798998-18798998 FN789-S Single Base Substitution C-T INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2442.SNP.8:18799821 chr08:018799821 0 W/18799821-18799821 FN2442 SNP C -> T AC=1;AN=200;BQB=0.476651;DP=4753;DP4=2337,2172,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.43638e-12;MQSB=0.739101;RPB=0.666971;SGB=39.9056;VDB=0.910828;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.8:18803017 chr08:018803017 0 W/18803017-18803017 FN1056-S Single Base Substitution C-T INTRON HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN-175.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN-175 Single Base Substitution C-T INTRON HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN-71.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN-71 Single Base Substitution C-T INTRON HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN1093-S Single Base Substitution C-T INTRON HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2279-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.248792;DP=4331;DP4=2241,1771,20,27;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0251674;MQB=0.996085;MQSB=1.28807e-12;RPB=0.962195;SGB=105.384;VDB=0.750292;EFF=INTRON(MODIFIER||||903|LOC_Os08g30550|protein_coding|CODING|LOC_Os08g30550.1|10|1) FN3665-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN3665-S SNP C -> T AC=2;AN=190;BQB=0.98286;DP=2592;DP4=1360,1079,23,22;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0.0435957;MQB=0.945771;MQSB=2.8026e-45;RPB=0.65609;SGB=193.858;VDB=0.576259;EFF=INTRON(MODIFIER||||903|LOC_Os08g30550|protein_coding|CODING|LOC_Os08g30550.1|10|1) FN4069-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.721088;DP=2623;DP4=1239,1251,16,16;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.0320244;MQB=0.0779661;MQSB=6.40968e-39;RPB=0.0285225;SGB=65.8287;VDB=0.342958;EFF=INTRON(MODIFIER||||903|LOC_Os08g30550|protein_coding|CODING|LOC_Os08g30550.1|10|1) FN509-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN509-S Single Base Substitution C-T INTRON HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN725-S.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 FN725-S Single Base Substitution C-T INTRON HOMO SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. W453-3-1.SNP.8:18808807 chr08:018808807 0 W/18808807-18808807 W453-3-1 Single Base Substitution C-T INTRON HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN3440-S.SNP.8:18815503 chr08:018815503 0 W/18815503-18815503 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.995662;DP=2688;DP4=1346,1259,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36781e-08;MQSB=0.999736;RPB=0.289859;SGB=35.7479;VDB=0.816676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.8:18816420 chr08:018816420 0 W/18816420-18816420 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.00798323;DP=3858;DP4=1599,2171,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.208e-06;MQSB=0.97354;RPB=0.999834;SGB=-98.724;VDB=0.157989;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.8:18822109 chr08:018822109 0 W/18822109-18822109 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.851867;DP=2547;DP4=1420,1022,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.75087e-13;MQSB=0.970595;RPB=0.962801;SGB=64.5316;VDB=0.756396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.8:18826253 chr08:018826253 0 W/18826253-18826253 FN3705-S SNP C -> T AC=2;AN=190;BQB=0.454256;DP=3074;DP4=1459,1444,18,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.71821e-19;MQSB=0.93779;RPB=0.999751;SGB=96.5165;VDB=0.540676;EFF=INTRON(MODIFIER||||226|LOC_Os08g30560|protein_coding|CODING|LOC_Os08g30560.1|3|1) FN3705-S.SNP.8:18826254 chr08:018826254 0 W/18826254-18826254 FN3705-S SNP G -> T AC=2;AN=190;BQB=0.960648;DP=3083;DP4=1476,1465,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.62665e-20;MQSB=0.882603;RPB=0.998427;SGB=103.624;VDB=0.584095;EFF=INTRON(MODIFIER||||226|LOC_Os08g30560|protein_coding|CODING|LOC_Os08g30560.1|3|1) FN3906-S.SNP.8:18831321 chr08:018831321 0 W/18831321-18831321 FN3906-S SNP C -> T AC=2;AN=158;BQB=0.703722;DP=2003;DP4=1047,813,8,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.28892e-05;MQSB=0.912618;RPB=0.994612;SGB=34.0735;VDB=0.212892;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.8:18833211 chr08:018833211 0 W/18833211-18833211 FN282-S Single Base Substitution A-T INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN1713-S.SNP.8:18833586 chr08:018833586 0 W/18833586-18833586 FN1713-S SNP G -> A AC=1;AN=188;BQB=0.312531;DP=3879;DP4=1960,1871,17,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02347e-09;MQSB=0.989761;RPB=0.924994;SGB=-64.8159;VDB=0.48512;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.8:18834290 chr08:018834290 0 W/18834290-18834290 FN_814-7-1 Single Base Substitution T-C Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN957-S.SNP.8:18836910 chr08:018836910 0 W/18836910-18836910 FN957-S Single Base Substitution A-T INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2210-S.SNP.8:18837523 chr08:018837523 0 W/18837523-18837523 FN2210-S SNP G -> A AC=1;AN=190;BQB=0.981266;DP=4565;DP4=1993,2306,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.08427e-12;MQSB=0.883929;RPB=0.825407;SGB=85.5263;VDB=0.469001;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.8:18837523 chr08:018837523 0 W/18837523-18837523 FN3372-S SNP G -> A AC=1;AN=184;BQB=0.855703;DP=2891;DP4=1623,1173,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.70214e-09;MQSB=0.99777;RPB=0.190882;SGB=39.2697;VDB=0.32273;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.8:18837523 chr08:018837523 0 W/18837523-18837523 FN759-S Single Base Substitution G-A INTERGENIC HOMO SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1355-S.SNP.8:18837954 chr08:018837954 0 W/18837954-18837954 FN1355-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN912-S.SNP.8:18838655 chr08:018838655 0 W/18838655-18838655 FN912-S Single Base Substitution A-G INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_N1-150-1.SNP.8:18839240 chr08:018839240 0 W/18839240-18839240 FN_N1-150-1 Single Base Substitution G-T HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2166-S.SNP.8:18839687 chr08:018839687 0 W/18839687-18839687 FN2166-S SNP G -> A AC=1;AN=168;BQB=0.588909;DP=4057;DP4=2040,1970,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.37674e-05;MQSB=0.880347;RPB=0.81309;SGB=1.32907;VDB=0.32273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.8:18848891 chr08:018848891 0 W/18848891-18848891 FN1151-S Single Base Substitution C-T INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN1505-S.SNP.8:18850788 chr08:018850788 0 W/18850788-18850788 FN1505-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g30590 C1-like domain containing protein, expressed SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2758-S.SNP.8:18857382 chr08:018857382 0 W/18857382-18857382 FN2758-S SNP G -> T AC=1;AN=200;BQB=0.100583;DP=4979;DP4=2245,2502,11,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0100422;MQB=0.0167582;MQSB=0.272052;RPB=0.449985;SGB=32.0901;VDB=0.817408;EFF=INTRON(MODIFIER||||829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|5|1) FN2192-S.SNP.8:18857758 chr08:018857758 0 W/18857758-18857758 FN2192-S SNP G -> T AC=1;AN=190;BQB=0.537346;DP=4890;DP4=2257,2152,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0361963;MQB=0.213959;MQSB=1.36903e-16;RPB=0.727245;SGB=-38.1089;VDB=0.37425;EFF=INTRON(MODIFIER||||829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|4|1) FN3550-S.SNP.8:18858503 chr08:018858503 0 W/18858503-18858503 FN3550-S SNP T -> A AC=1;AN=188;BQB=0.941317;DP=3373;DP4=1635,1647,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.27861e-06;MQSB=0.150226;RPB=0.676021;SGB=35.3493;VDB=0.449235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E481V|829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|4|1) FN3550-S.SNP.8:18858504 chr08:018858504 0 W/18858504-18858504 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.940241;DP=3358;DP4=1631,1667,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17149e-06;MQSB=0.177625;RPB=0.540794;SGB=28.8977;VDB=0.553773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E481K|829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|4|1) FN2312.SNP.8:18860357 chr08:018860357 0 W/18860357-18860357 FN2312 SNP T -> C AC=1;AN=192;BQB=0.28054;DP=4372;DP4=2029,1892,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00457457;MQB=1.38081e-11;MQSB=0.304488;RPB=0.999429;SGB=41.7357;VDB=0.366833;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N60D|829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|1|1) FN2557-S.SNP.8:18860361 chr08:018860361 0 W/18860361-18860361 FN2557-S SNP C -> G AC=1;AN=198;BQB=0.981633;DP=3722;DP4=1832,1734,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00671682;MQB=3.09585e-06;MQSB=0.911993;RPB=0.7218;SGB=44.9538;VDB=0.0039656;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E58D|829|LOC_Os08g30600|protein_coding|CODING|LOC_Os08g30600.1|1|1) FN3861-S.SNP.8:18864686 chr08:018864686 0 W/18864686-18864686 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.95931;DP=2722;DP4=1227,1418,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.053637;MQB=0.740861;MQSB=0.50295;RPB=0.998167;SGB=33.9591;VDB=0.577326;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R630|878|LOC_Os08g30610|protein_coding|CODING|LOC_Os08g30610.1|4|1) FN3665-S.SNP.8:18867882 chr08:018867882 0 W/18867882-18867882 FN3665-S SNP C -> A AC=1;AN=190;BQB=0.879005;DP=2284;DP4=1058,1129,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000118766;MQSB=0.0059635;RPB=0.275526;SGB=49.0954;VDB=0.882403;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.8:18870909 chr08:018870909 0 W/18870909-18870909 FN824-S Single Base Substitution C-T INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3606-S.SNP.8:18871589 chr08:018871589 0 W/18871589-18871589 FN3606-S SNP G -> C AC=1;AN=190;BQB=0.998658;DP=2677;DP4=1243,1298,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02283e-06;MQSB=0.701825;RPB=0.586655;SGB=49.0954;VDB=0.810718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.8:18875851 chr08:018875851 0 W/18875851-18875851 FN2461 SNP A -> G AC=1;AN=200;BQB=0.997726;DP=4307;DP4=2138,1920,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.52443e-08;MQSB=0.991674;RPB=0.952358;SGB=36.6644;VDB=0.143809;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.8:18876461 chr08:018876461 0 W/18876461-18876461 FN944-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN707-S.SNP.8:18887584 chr08:018887584 0 W/18887584-18887584 FN707-S Single Base Substitution A-G INTRON HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN3740-S.SNP.8:18888357 chr08:018888357 0 W/18888357-18888357 FN3740-S SNP T -> C AC=1;AN=190;BQB=0.982237;DP=3035;DP4=1426,1467,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43321e-07;MQSB=0.977792;RPB=0.999673;SGB=28.9929;VDB=0.755668;EFF=INTRON(MODIFIER||||846|LOC_Os08g30634|protein_coding|CODING|LOC_Os08g30634.1|2|1),INTRON(MODIFIER||||809|LOC_Os08g30634|protein_coding|CODING|LOC_Os08g30634.2|2|1) FN2611-S.SNP.8:18895107 chr08:018895107 0 W/18895107-18895107 FN2611-S SNP T -> G AC=1;AN=200;BQB=0.996021;DP=4495;DP4=2215,2107,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44247e-21;MQSB=0.993017;RPB=0.976343;SGB=108.768;VDB=0.867941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.8:18895109 chr08:018895109 0 W/18895109-18895109 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.271624;DP=4498;DP4=2172,2107,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.13516e-21;MQSB=0.988037;RPB=0.970282;SGB=141.763;VDB=0.947779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.8:18900978 chr08:018900978 0 W/18900978-18900978 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.994633;DP=3100;DP4=1426,1602,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0274194;MQB=1.34407e-06;MQSB=0.269383;RPB=0.626447;SGB=71.8647;VDB=0.89342;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.8:18909122 chr08:018909122 0 W/18909122-18909122 FN1375-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2240-S.SNP.8:18909361 chr08:018909361 0 W/18909361-18909361 FN2240-S SNP G -> A AC=2;AN=190;BQB=0.997085;DP=4489;DP4=2227,2001,26,12;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.198485;MQB=0.792667;MQSB=4.85667e-05;RPB=0.792381;SGB=167.496;VDB=0.542917;EFF=INTRON(MODIFIER||||1986|LOC_Os08g30670|protein_coding|CODING|LOC_Os08g30670.1|5|1) FN464-S.SNP.8:18930938 chr08:018930938 0 W/18930938-18930938 FN464-S Single Base Substitution G-T INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN1615-S.SNP.8:18940927 chr08:018940927 0 W/18940927-18940927 FN1615-S Single Base Substitution G-A INTRON Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN-51.SNP.8:18942018 chr08:018942018 0 W/18942018-18942018 FN-51 Single Base Substitution C-T INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.8:18942018 chr08:018942018 0 W/18942018-18942018 FN-51 Single Base Substitution C-T INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-245.SNP.8:18953400 chr08:018953400 0 W/18953400-18953400 FN-245 Single Base Substitution G-T INTERGENIC HOMO SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1476-S.SNP.8:18966128 chr08:018966128 0 W/18966128-18966128 FN1476-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g30740 ABC transporter, ATP-binding protein, putative, expressed SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2311.SNP.8:18967891 chr08:018967891 0 W/18967891-18967891 FN2311 SNP C -> A AC=1;AN=192;BQB=0.578816;DP=5123;DP4=2349,2484,19,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.8235e-17;MQSB=0.885239;RPB=0.592224;SGB=-6.30345;VDB=0.651859;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.8:18971442 chr08:018971442 0 W/18971442-18971442 FN522-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3831-S.SNP.8:18972438 chr08:018972438 0 W/18972438-18972438 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.672688;DP=3011;DP4=1614,1312,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00597808;MQB=0.00108176;MQSB=0.920662;RPB=0.115603;SGB=39.6545;VDB=0.0907444;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A313|1190|LOC_Os08g30750|protein_coding|CODING|LOC_Os08g30750.1|4|1) FN2560-S.SNP.8:18974201 chr08:018974201 0 W/18974201-18974201 FN2560-S SNP G -> C AC=1;AN=198;BQB=0.203142;DP=3631;DP4=1944,1442,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0184522;MQB=0.00436312;MQSB=0.999971;RPB=0.438025;SGB=16.3688;VDB=0.68905;EFF=INTRON(MODIFIER||||1190|LOC_Os08g30750|protein_coding|CODING|LOC_Os08g30750.1|2|1) FN2134-S.SNP.8:18976841 chr08:018976841 0 W/18976841-18976841 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.000194428;DP=2682;DP4=1835,790,17,20;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.000745712;MQB=0.992039;MQSB=4.22889e-38;RPB=0.998504;SGB=-338.586;VDB=0.920293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.8:18977352 chr08:018977352 0 W/18977352-18977352 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.399974;DP=4779;DP4=2155,2307,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0449885;MQB=0.29762;MQSB=8.34565e-05;RPB=0.978416;SGB=21.1058;VDB=0.00936448;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.8:18980493 chr08:018980493 0 W/18980493-18980493 FN_N1-151-7 Single Base Substitution C-T HET LOC_Os08g30760 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN3521-S.SNP.8:18988922 chr08:018988922 0 W/18988922-18988922 FN3521-S SNP A -> G AC=1;AN=188;BQB=0.999695;DP=2486;DP4=1126,1281,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.74659e-05;MQSB=0.99576;RPB=0.980335;SGB=26.2637;VDB=0.358597;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.8:18992128 chr08:018992128 0 W/18992128-18992128 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.931996;DP=2881;DP4=1258,1521,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.93406e-10;MQSB=0.734415;RPB=0.999518;SGB=67.1521;VDB=0.611457;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.8:18997007 chr08:018997007 0 W/18997007-18997007 FN909-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN3573-S.SNP.8:19005471 chr08:019005471 0 W/19005471-19005471 FN3573-S SNP A -> T AC=1;AN=188;BQB=0.16813;DP=2962;DP4=1471,1403,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.92489e-09;MQSB=0.922234;RPB=0.907397;SGB=38.7926;VDB=0.429959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D634V|988|LOC_Os08g30780|protein_coding|CODING|LOC_Os08g30780.1|12|1) FN415-S.SNP.8:19009014 chr08:019009014 0 W/19009014-19009014 FN415-S Single Base Substitution T-C INTERGENIC HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN1556-S.SNP.8:19010561 chr08:019010561 0 W/19010561-19010561 FN1556-S Single Base Substitution G-C INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN-182.SNP.8:19011249 chr08:019011249 0 W/19011249-19011249 FN-182 Single Base Substitution T-C INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN1102-S.SNP.8:19013652 chr08:019013652 0 W/19013652-19013652 FN1102-S Single Base Substitution T-C INTRON HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN-240.SNP.8:19014384 chr08:019014384 0 W/19014384-19014384 FN-240 Single Base Substitution C-T INTRON HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN4148-S.SNP.8:19024992 chr08:019024992 0 W/19024992-19024992 FN4148-S SNP T -> C AC=2;AN=170;BQB=0.959736;DP=2720;DP4=1227,1396,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.00114e-17;MQSB=0.937843;RPB=0.532664;SGB=83.0751;VDB=0.572098;EFF=INTRON(MODIFIER||||875|LOC_Os08g30810|protein_coding|CODING|LOC_Os08g30810.1|6|1) FN3851-S.SNP.8:19029044 chr08:019029044 0 W/19029044-19029044 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.78581;DP=2673;DP4=1439,1129,14,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.73213e-10;MQSB=0.938539;RPB=0.0744148;SGB=38.0354;VDB=0.353713;EFF=INTRON(MODIFIER||||875|LOC_Os08g30810|protein_coding|CODING|LOC_Os08g30810.1|13|1) FN2142-S.SNP.8:19033267 chr08:019033267 0 W/19033267-19033267 FN2142-S SNP G -> A AC=2;AN=168;BQB=5.14537e-05;DP=2398;DP4=1021,1325,8,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.14528e-06;MQSB=0.896539;RPB=0.97913;SGB=-37.7974;VDB=0.0691992;EFF=UTR_5_PRIME(MODIFIER||159||226|LOC_Os08g30820|protein_coding|CODING|LOC_Os08g30820.1|1|1) FN2142-S.SNP.8:19033269 chr08:019033269 0 W/19033269-19033269 FN2142-S SNP G -> T AC=2;AN=168;BQB=1.64441e-05;DP=2381;DP4=1015,1314,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.52127e-05;MQSB=0.823186;RPB=0.986895;SGB=-15.8033;VDB=0.109184;EFF=UTR_5_PRIME(MODIFIER||161||226|LOC_Os08g30820|protein_coding|CODING|LOC_Os08g30820.1|1|1) FN2142-S.SNP.8:19033270 chr08:019033270 0 W/19033270-19033270 FN2142-S SNP G -> T AC=2;AN=168;BQB=0.000209183;DP=2377;DP4=1024,1303,8,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.51052e-05;MQSB=0.880763;RPB=0.908858;SGB=4.1907;VDB=0.142522;EFF=UTR_5_PRIME(MODIFIER||162||226|LOC_Os08g30820|protein_coding|CODING|LOC_Os08g30820.1|1|1) FN3932-S.SNP.8:19041135 chr08:019041135 0 W/19041135-19041135 FN3932-S SNP G -> A AC=1;AN=158;BQB=0.92166;DP=2753;DP4=1450,1195,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.52866e-06;MQSB=0.997769;RPB=0.910381;SGB=33.9591;VDB=0.492004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.8:19041816 chr08:019041816 0 W/19041816-19041816 FN2621-S SNP C -> T AC=2;AN=200;BQB=0.946587;DP=5026;DP4=2343,2427,36,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.26824e-39;MQSB=0.981852;RPB=0.975636;SGB=86.5381;VDB=0.914672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.8:19046061 chr08:019046061 0 W/19046061-19046061 FN1455-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g30850 YDG/SRA domain containing protein, expressed SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN1455-S.SNP.8:19046062 chr08:019046062 0 W/19046062-19046062 FN1455-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN993-S.SNP.8:19048415 chr08:019048415 0 W/19048415-19048415 FN993-S Single Base Substitution C-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN524-S.SNP.8:19048966 chr08:019048966 0 W/19048966-19048966 FN524-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g30860 hypothetical protein SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN4164-S.SNP.8:19068303 chr08:019068303 0 W/19068303-19068303 FN4164-S SNP C -> A AC=1;AN=170;BQB=0.94807;DP=1651;DP4=953,613,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.12835e-05;MQSB=0.847738;RPB=0.615437;SGB=24.5502;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.8:19070282 chr08:019070282 0 W/19070282-19070282 FN_809-6-1 Single Base Substitution C-G HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN1466-S.SNP.8:19072053 chr08:019072053 0 W/19072053-19072053 FN1466-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g30900 YDG/SRA domain containing protein, expressed SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3394-S.SNP.8:19079411 chr08:019079411 0 W/19079411-19079411 FN3394-S SNP C -> A AC=1;AN=184;BQB=0.983903;DP=2823;DP4=1306,1367,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000268664;MQSB=0.547269;RPB=0.660098;SGB=62.3078;VDB=0.507622;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.8:19082422 chr08:019082422 0 W/19082422-19082422 FN772-S Single Base Substitution T-A INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN772-S.SNP.8:19082423 chr08:019082423 0 W/19082423-19082423 FN772-S Single Base Substitution G-A INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3856-S.SNP.8:19088777 chr08:019088777 0 W/19088777-19088777 FN3856-S SNP G -> T AC=1;AN=158;BQB=0.988992;DP=2414;DP4=1239,1090,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.47576e-08;MQSB=0.973549;RPB=0.874318;SGB=55.806;VDB=0.59783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q1053H|1292|LOC_Os08g30910|protein_coding|CODING|LOC_Os08g30910.1|2|1) FN2438.SNP.8:19101902 chr08:019101902 0 W/19101902-19101902 FN2438 SNP A -> G AC=1;AN=200;BQB=0.853893;DP=4136;DP4=1536,2143,3,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63638e-08;MQSB=0.549936;RPB=0.756246;SGB=58.8698;VDB=0.239607;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.8:19107687 chr08:019107687 0 W/19107687-19107687 FN3435-S SNP A -> G AC=2;AN=184;BQB=0.936884;DP=2614;DP4=1223,1216,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.58023e-10;MQSB=0.999989;RPB=0.997996;SGB=46.3132;VDB=0.296488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T80A|507|LOC_Os08g30950|protein_coding|CODING|LOC_Os08g30950.1|1|1) FN-89.SNP.8:19112087 chr08:019112087 0 W/19112087-19112087 FN-89 Single Base Substitution A-T INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3823-S.SNP.8:19118496 chr08:019118496 0 W/19118496-19118496 FN3823-S SNP A -> G AC=2;AN=190;BQB=0.979143;DP=3112;DP4=1728,1296,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.09705e-16;MQSB=0.994448;RPB=0.962467;SGB=108.296;VDB=0.91404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.8:19135584 chr08:019135584 0 W/19135584-19135584 FN2412 SNP G -> A AC=1;AN=200;BQB=0.38739;DP=4464;DP4=2182,2061,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.72626e-16;MQSB=0.843838;RPB=0.979523;SGB=60.747;VDB=0.241356;EFF=INTRON(MODIFIER||||1670|LOC_Os08g30990|protein_coding|CODING|LOC_Os08g30990.1|5|1) FN2659-S.SNP.8:19143032 chr08:019143032 0 W/19143032-19143032 FN2659-S SNP T -> A AC=1;AN=200;BQB=0.982995;DP=5070;DP4=2603,2195,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48186e-17;MQSB=0.886935;RPB=0.981374;SGB=-39.6587;VDB=0.908002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.8:19155898 chr08:019155898 0 W/19155898-19155898 FN3393-S SNP A -> G AC=1;AN=184;BQB=0.655184;DP=2778;DP4=1202,1473,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.69788e-07;MQSB=0.989009;RPB=0.708951;SGB=13.188;VDB=0.547427;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.8:19157451 chr08:019157451 0 W/19157451-19157451 FN3981-S SNP A -> G AC=1;AN=168;BQB=0.974056;DP=2543;DP4=1464,998,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48388e-06;MQSB=0.975801;RPB=0.0773798;SGB=14.8923;VDB=0.0161343;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I573|584|LOC_Os08g31030|protein_coding|CODING|LOC_Os08g31030.1|6|1) FN1128-S.SNP.8:19169336 chr08:019169336 0 W/19169336-19169336 FN1128-S Single Base Substitution T-G INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN-119.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN-119 Single Base Substitution G-A INTERGENIC HOMO SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-339.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN-339 Single Base Substitution G-A INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN3465-S.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN3465-S SNP G -> A AC=1;AN=184;BQB=0.995003;DP=2594;DP4=1272,1227,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.08261e-14;MQSB=0.988414;RPB=0.663439;SGB=103.004;VDB=0.254487;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.920349;DP=2355;DP4=1257,1026,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05675e-08;MQSB=0.886572;RPB=0.962341;SGB=58.2031;VDB=0.100839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN3924-S SNP G -> A AC=2;AN=158;BQB=0.947971;DP=2094;DP4=1087,919,14,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.36488e-11;MQSB=0.922352;RPB=0.54298;SGB=33.2965;VDB=0.091492;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN701-S Single Base Substitution G-A INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN973-S.SNP.8:19170691 chr08:019170691 0 W/19170691-19170691 FN973-S Single Base Substitution G-A INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2279-S.SNP.8:19172575 chr08:019172575 0 W/19172575-19172575 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.143989;DP=4504;DP4=2037,2086,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000222025;MQB=1.32938e-07;MQSB=0.376585;RPB=0.976915;SGB=49.0954;VDB=0.952086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.8:19175431 chr08:019175431 0 W/19175431-19175431 FN2648-S SNP G -> A AC=2;AN=200;BQB=0.579864;DP=4449;DP4=2077,2082,19,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.42726e-25;MQSB=0.989852;RPB=0.817973;SGB=155.635;VDB=0.774692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T297M|886|LOC_Os08g31060|protein_coding|CODING|LOC_Os08g31060.1|4|1) FN3979-S.SNP.8:19177981 chr08:019177981 0 W/19177981-19177981 FN3979-S SNP A -> G AC=1;AN=168;BQB=0.54676;DP=2710;DP4=1233,1339,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.08784e-11;MQSB=0.960771;RPB=0.9999;SGB=41.6313;VDB=0.782419;EFF=INTRON(MODIFIER||||886|LOC_Os08g31060|protein_coding|CODING|LOC_Os08g31060.1|2|1) FN2422.SNP.8:19179681 chr08:019179681 0 W/19179681-19179681 FN2422 SNP T -> C AC=2;AN=200;BQB=0.942667;DP=4783;DP4=2245,2271,24,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.52889e-20;MQSB=0.839845;RPB=0.599582;SGB=130.399;VDB=0.880166;EFF=INTRON(MODIFIER||||886|LOC_Os08g31060|protein_coding|CODING|LOC_Os08g31060.1|1|1) FN1323-S.SNP.8:19180269 chr08:019180269 0 W/19180269-19180269 FN1323-S Single Base Substitution C-T INTRON HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN3347-S.SNP.8:19186881 chr08:019186881 0 W/19186881-19186881 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.999723;DP=3482;DP4=1697,1651,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.62645e-12;MQSB=0.958641;RPB=0.917453;SGB=63.9222;VDB=0.623449;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.8:19188275 chr08:019188275 0 W/19188275-19188275 FN_777-2-1 Single Base Substitution C-A HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN_777-2-1.SNP.8:19188276 chr08:019188276 0 W/19188276-19188276 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1731-S.SNP.8:19190054 chr08:019190054 0 W/19190054-19190054 FN1731-S SNP C -> A AC=1;AN=188;BQB=0.329074;DP=3932;DP4=1718,2177,16,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.55765e-11;MQSB=0.996732;RPB=0.31029;SGB=-39.6481;VDB=0.398327;EFF=INTERGENIC(MODIFIER||||||||||1) FN455-S.SNP.8:19194586 chr08:019194586 0 W/19194586-19194586 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN3982-S.SNP.8:19204800 chr08:019204800 0 W/19204800-19204800 FN3982-S SNP G -> A AC=2;AN=168;BQB=0.682919;DP=2729;DP4=1183,1431,8,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.04761e-10;MQSB=0.927566;RPB=0.824718;SGB=44.0621;VDB=0.640634;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.8:19207274 chr08:019207274 0 W/19207274-19207274 FN2479 SNP A -> C AC=1;AN=200;BQB=0.979074;DP=3061;DP4=1091,1535,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.62153e-06;MQSB=0.965699;RPB=0.916278;SGB=40.2696;VDB=0.826571;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I167L|263|LOC_Os08g31090|protein_coding|CODING|LOC_Os08g31090.1|1|1) FN-309.SNP.8:19207322 chr08:019207322 0 W/19207322-19207322 FN-309 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g31090 expressed protein SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN-169.SNP.8:19208050 chr08:019208050 0 W/19208050-19208050 FN-169 Single Base Substitution G-C INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3667-S.SNP.8:19208850 chr08:019208850 0 W/19208850-19208850 FN3667-S SNP A -> G AC=2;AN=190;BQB=0.75949;DP=2864;DP4=1097,1609,5,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13116e-10;MQSB=0.897023;RPB=0.924038;SGB=71.8647;VDB=0.898493;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.8:19209840 chr08:019209840 0 W/19209840-19209840 FN319-S Single Base Substitution A-T INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2671-S.SNP.8:19217167 chr08:019217167 0 W/19217167-19217167 FN2671-S SNP G -> A AC=1;AN=200;BQB=0.989345;DP=4723;DP4=2266,2225,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84088e-05;MQSB=0.979673;RPB=0.763104;SGB=15.0344;VDB=0.741488;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D399N|506|LOC_Os08g31110|protein_coding|CODING|LOC_Os08g31110.1|1|1) FN4140-S.SNP.8:19219605 chr08:019219605 0 W/19219605-19219605 FN4140-S SNP T -> A AC=1;AN=170;BQB=0.998518;DP=2660;DP4=1245,1306,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.5684e-08;MQSB=0.95908;RPB=0.929076;SGB=38.3207;VDB=0.0814203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.8:19224421 chr08:019224421 0 W/19224421-19224421 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.636934;DP=4292;DP4=1851,2221,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.28975e-07;MQSB=0.440241;RPB=0.350691;SGB=8.77275;VDB=0.673997;EFF=SPLICE_SITE_REGION(LOW||||347|LOC_Os08g31130|protein_coding|CODING|LOC_Os08g31130.1|2|1),UTR_3_PRIME(MODIFIER||376||175|LOC_Os08g31120|protein_coding|CODING|LOC_Os08g31120.1|4|1),INTRON(MODIFIER||||347|LOC_Os08g31130|protein_coding|CODING|LOC_Os08g31130.1|2|1) FN3824-S.SNP.8:19225450 chr08:019225450 0 W/19225450-19225450 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.966526;DP=2294;DP4=1076,1144,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.25043e-07;MQSB=0.960584;RPB=0.537357;SGB=49.0954;VDB=0.869299;EFF=INTRON(MODIFIER||||347|LOC_Os08g31130|protein_coding|CODING|LOC_Os08g31130.1|2|1) FN930-S.SNP.8:19225545 chr08:019225545 0 W/19225545-19225545 FN930-S Single Base Substitution A-G INTRON HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2595-S.SNP.8:19226003 chr08:019226003 0 W/19226003-19226003 FN2595-S SNP C -> A AC=1;AN=198;BQB=0.770317;DP=3815;DP4=1793,1848,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.50602e-09;MQSB=0.977912;RPB=0.744527;SGB=72.5245;VDB=0.0148581;EFF=INTRON(MODIFIER||||347|LOC_Os08g31130|protein_coding|CODING|LOC_Os08g31130.1|2|1) FN4260-S.SNP.8:19231108 chr08:019231108 0 W/19231108-19231108 FN4260-S SNP A -> G AC=1;AN=170;BQB=0.97062;DP=2738;DP4=1300,1329,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.58919e-10;MQSB=0.949263;RPB=0.960456;SGB=61.2001;VDB=0.0420973;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.8:19238622 chr08:019238622 0 W/19238622-19238622 FN1573-S Single Base Substitution T-C INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2218-S.SNP.8:19239322 chr08:019239322 0 W/19239322-19239322 FN2218-S SNP C -> A AC=1;AN=190;BQB=0.278644;DP=4832;DP4=2308,2224,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00434603;MQB=0.0531652;MQSB=0.726277;RPB=0.999539;SGB=38.983;VDB=0.449383;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.8:19247494 chr08:019247494 0 W/19247494-19247494 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.281485;DP=3724;DP4=1823,1673,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.29679e-07;MQSB=0.952712;RPB=0.993134;SGB=54.144;VDB=0.993613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.8:19254022 chr08:019254022 0 W/19254022-19254022 FN1067-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g31150 retrotransposon protein, putative, unclassified, expressed SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2088-S.SNP.8:19261297 chr08:019261297 0 W/19261297-19261297 FN2088-S SNP A -> G AC=1;AN=168;BQB=0.671129;DP=3033;DP4=1902,1095,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87814e-09;MQSB=0.878442;RPB=0.553029;SGB=34.3388;VDB=0.869647;EFF=INTERGENIC(MODIFIER||||||||||1) FN1590-S.SNP.8:19263994 chr08:019263994 0 W/19263994-19263994 FN1590-S Single Base Substitution G-A INTERGENIC Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN-111.SNP.8:19266920 chr08:019266920 0 W/19266920-19266920 FN-111 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g31170 DC1 domain-containing protein, putative, expressed SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN3546-S.SNP.8:19272064 chr08:019272064 0 W/19272064-19272064 FN3546-S SNP C -> T AC=2;AN=188;BQB=0.591933;DP=3022;DP4=1375,1489,8,10;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000661813;MQB=1.96755e-05;MQSB=0.00346046;RPB=0.580141;SGB=76.2387;VDB=0.234292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.8:19276580 chr08:019276580 0 W/19276580-19276580 FN-344 Single Base Substitution C-T INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN479-S.SNP.8:19293992 chr08:019293992 0 W/19293992-19293992 FN479-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g31200 cytokinin-O-glucosyltransferase 2, putative, expressed SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1751-S.SNP.8:19298750 chr08:019298750 0 W/19298750-19298750 FN1751-S SNP A -> T AC=2;AN=188;BQB=0.500255;DP=1996;DP4=817,1122,8,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.10168e-09;MQSB=0.965983;RPB=0.898369;SGB=43.8792;VDB=0.564299;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.8:19300285 chr08:019300285 0 W/19300285-19300285 FN3564-S SNP A -> G AC=2;AN=188;BQB=0.91455;DP=2681;DP4=1195,1366,15,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.6277e-23;MQSB=0.866118;RPB=0.676852;SGB=179.797;VDB=0.364514;EFF=INTRON(MODIFIER||||334|LOC_Os08g31210|protein_coding|CODING|LOC_Os08g31210.1|2|1) FN1031-S.SNP.8:19319727 chr08:019319727 0 W/19319727-19319727 FN1031-S Single Base Substitution G-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2429.SNP.8:19322589 chr08:019322589 0 W/19322589-19322589 FN2429 SNP G -> A AC=1;AN=200;BQB=0.905042;DP=4302;DP4=2246,1799,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.35133e-12;MQSB=0.954071;RPB=0.904104;SGB=45.1159;VDB=0.316623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.8:19326360 chr08:019326360 0 W/19326360-19326360 FN2742-S SNP T -> A AC=1;AN=200;BQB=0.522566;DP=4974;DP4=2472,2235,22,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23294e-19;MQSB=0.99996;RPB=0.825809;SGB=-2.82234;VDB=0.506807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.8:19332277 chr08:019332277 0 W/19332277-19332277 FN1119-S Single Base Substitution A-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2626-S.SNP.8:19339503 chr08:019339503 0 W/19339503-19339503 FN2626-S SNP G -> A AC=1;AN=200;BQB=0.445863;DP=4812;DP4=2268,2333,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24295e-05;MQSB=0.956808;RPB=0.862289;SGB=31.2392;VDB=0.250098;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.8:19346124 chr08:019346124 0 W/19346124-19346124 FN-158 Single Base Substitution T-A INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1665-S.SNP.8:19346982 chr08:019346982 0 W/19346982-19346982 FN1665-S Single Base Substitution C-T INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3504-S.SNP.8:19350608 chr08:019350608 0 W/19350608-19350608 FN3504-S SNP G -> A AC=1;AN=188;BQB=0.930292;DP=3063;DP4=1559,1391,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.51103e-08;MQSB=0.0752872;RPB=0.815784;SGB=18.4463;VDB=0.833674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.8:19352380 chr08:019352380 0 W/19352380-19352380 FN2438 SNP G -> T AC=1;AN=200;BQB=0.433146;DP=4555;DP4=2059,2195,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.17202e-07;MQSB=0.734598;RPB=0.57449;SGB=43.8747;VDB=0.940861;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.8:19354291 chr08:019354291 0 W/19354291-19354291 FN885-S Single Base Substitution A-G INTERGENIC HET SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN692-S.SNP.8:19355242 chr08:019355242 0 W/19355242-19355242 FN692-S Single Base Substitution C-A INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2214-S.SNP.8:19355617 chr08:019355617 0 W/19355617-19355617 FN2214-S SNP G -> T AC=1;AN=190;BQB=0.511741;DP=2546;DP4=969,1382,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0001625;MQSB=0.981083;RPB=0.808291;SGB=26.3271;VDB=0.0100415;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.8:19357195 chr08:019357195 0 W/19357195-19357195 FN3567-S SNP G -> T AC=1;AN=188;BQB=0.881195;DP=2919;DP4=1442,1401,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.56711e-10;MQSB=0.980029;RPB=0.512604;SGB=46.6141;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.8:19363254 chr08:019363254 0 W/19363254-19363254 FN1150-S Single Base Substitution A-G INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN761-S.SNP.8:19379424 chr08:019379424 0 W/19379424-19379424 FN761-S Single Base Substitution G-C INTERGENIC HET SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN1698-S.SNP.8:19381757 chr08:019381757 0 W/19381757-19381757 FN1698-S SNP G -> T AC=1;AN=188;BQB=0.0208754;DP=3714;DP4=1675,2000,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.47236e-05;MQSB=0.9785;RPB=0.970543;SGB=-104.065;VDB=0.332478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.8:19388034 chr08:019388034 0 W/19388034-19388034 FN2678-S SNP G -> T AC=1;AN=200;BQB=0.846394;DP=3494;DP4=1235,1993,3,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.4479e-05;MQSB=7.55161e-16;RPB=0.818413;SGB=22.2439;VDB=0.251355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.8:19389863 chr08:019389863 0 W/19389863-19389863 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.951299;DP=5007;DP4=2332,2361,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.35286e-12;MQSB=0.955928;RPB=0.0203617;SGB=11.0951;VDB=0.0489461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P589L|684|LOC_Os08g31350|protein_coding|CODING|LOC_Os08g31350.1|7|1),SPLICE_SITE_REGION(LOW||||684|LOC_Os08g31350|protein_coding|CODING|LOC_Os08g31350.1|7|1) FN3715-S.SNP.8:19390030 chr08:019390030 0 W/19390030-19390030 FN3715-S SNP T -> A AC=1;AN=190;BQB=0.965533;DP=2779;DP4=1447,1085,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36088e-07;MQSB=0.978887;RPB=0.516293;SGB=39.6545;VDB=0.0275695;EFF=SPLICE_SITE_REGION(LOW||||684|LOC_Os08g31350|protein_coding|CODING|LOC_Os08g31350.1|6|1),INTRON(MODIFIER||||684|LOC_Os08g31350|protein_coding|CODING|LOC_Os08g31350.1|6|1) FN3626-S.SNP.8:19396395 chr08:019396395 0 W/19396395-19396395 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.868821;DP=2558;DP4=1408,1038,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00820954;MQB=3.32976e-07;MQSB=5.9414e-05;RPB=0.255725;SGB=62.7569;VDB=0.941701;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.8:19403980 chr08:019403980 0 W/19403980-19403980 FN484-S Single Base Substitution A-G INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN566-S.SNP.8:19404033 chr08:019404033 0 W/19404033-19404033 FN566-S Single Base Substitution C-T INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN883-S.SNP.8:19406897 chr08:019406897 0 W/19406897-19406897 FN883-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g31390 retrotransposon protein, putative, unclassified, expressed SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2317.SNP.8:19414984 chr08:019414984 0 W/19414984-19414984 FN2317 SNP T -> A AC=2;AN=192;BQB=0.625617;DP=4188;DP4=1969,1899,9,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.9383e-12;MQSB=0.992608;RPB=0.407052;SGB=16.7409;VDB=0.361678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.8:19419834 chr08:019419834 0 W/19419834-19419834 FN2373 SNP G -> A AC=1;AN=192;BQB=0.289964;DP=3654;DP4=1067,2301,3,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.14076e-07;MQSB=0.994585;RPB=0.746307;SGB=8.91915;VDB=0.838388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.8:19428948 chr08:019428948 0 W/19428948-19428948 FN2105-S SNP G -> A AC=1;AN=168;BQB=0.0548566;DP=3811;DP4=1896,1888,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.86816e-05;MQSB=0.988972;RPB=0.81364;SGB=-57.0838;VDB=0.999765;EFF=INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.1|2|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.2|2|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.3|2|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.5|2|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.6|2|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.7|1|1),INTRON(MODIFIER||||656|LOC_Os08g31410|protein_coding|CODING|LOC_Os08g31410.4|2|1) FN1475-S.SNP.8:19429395 chr08:019429395 0 W/19429395-19429395 FN1475-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g31410 sulfate transporter, putative, expressed SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1701-S.SNP.8:19432988 chr08:019432988 0 W/19432988-19432988 FN1701-S SNP C -> T AC=2;AN=188;BQB=0.784619;DP=3656;DP4=1811,1795,23,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.99037e-16;MQSB=0.956292;RPB=0.627819;SGB=39.4907;VDB=0.680352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.8:19433763 chr08:019433763 0 W/19433763-19433763 FN3843-S SNP T -> A AC=1;AN=190;BQB=0.812946;DP=2610;DP4=1342,1104,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.06239e-10;MQSB=0.942323;RPB=0.999699;SGB=67.3108;VDB=0.590472;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.8:19440091 chr08:019440091 0 W/19440091-19440091 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.823532;DP=2512;DP4=1293,1158,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00477707;MQB=0.0358226;MQSB=0.305553;RPB=0.559301;SGB=36.9825;VDB=0.74467;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.8:19440631 chr08:019440631 0 W/19440631-19440631 FN760-S Single Base Substitution C-T INTERGENIC HOMO SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1175-S.SNP.8:19441610 chr08:019441610 0 W/19441610-19441610 FN1175-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g31430 MBTB27 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3529-S.SNP.8:19444787 chr08:019444787 0 W/19444787-19444787 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.994436;DP=2639;DP4=1224,1337,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.79472e-07;MQSB=0.988592;RPB=0.642312;SGB=10.8165;VDB=0.448353;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.8:19457149 chr08:019457149 0 W/19457149-19457149 FN1196-S Single Base Substitution C-T INTRON HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN2107-S.SNP.8:19467262 chr08:019467262 0 W/19467262-19467262 FN2107-S SNP A -> C AC=2;AN=168;BQB=0.0334419;DP=3872;DP4=1963,1848,22,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.48609e-12;MQSB=0.982119;RPB=0.994272;SGB=-283.582;VDB=0.236096;EFF=INTRON(MODIFIER||||590|LOC_Os08g31470|protein_coding|CODING|LOC_Os08g31470.1|3|1),INTRON(MODIFIER||||590|LOC_Os08g31470|protein_coding|CODING|LOC_Os08g31470.2|3|1),INTRON(MODIFIER||||342|LOC_Os08g31470|protein_coding|CODING|LOC_Os08g31470.3|1|1),INTRON(MODIFIER||||342|LOC_Os08g31470|protein_coding|CODING|LOC_Os08g31470.4|2|1) FN323-S.SNP.8:19479377 chr08:019479377 0 W/19479377-19479377 FN323-S Single Base Substitution C-A INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2297.SNP.8:19479379 chr08:019479379 0 W/19479379-19479379 FN2297 SNP T -> G AC=1;AN=192;BQB=0.836295;DP=4915;DP4=2537,2102,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.44486e-08;MQSB=0.968935;RPB=0.997619;SGB=50.4731;VDB=0.486796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3573-S.SNP.8:19480288 chr08:019480288 0 W/19480288-19480288 FN3573-S SNP T -> C AC=1;AN=188;BQB=0.985043;DP=3328;DP4=1485,1714,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000300481;MQB=7.9052e-10;MQSB=0.0220866;RPB=0.27361;SGB=80.782;VDB=0.676725;EFF=INTERGENIC(MODIFIER||||||||||1) FN-49.SNP.8:19481906 chr08:019481906 0 W/19481906-19481906 FN-49 Single Base Substitution C-A INTERGENIC Homo SNo: 49, Mutant_ID: FN-49, Generation: M2, Mutations: 44, Genes: 18, Seed availability: Yes. FN3760-S.SNP.8:19482303 chr08:019482303 0 W/19482303-19482303 FN3760-S SNP G -> T AC=1;AN=190;BQB=0.797686;DP=2890;DP4=1374,1441,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06278e-05;MQSB=0.587363;RPB=0.9556;SGB=28.9929;VDB=0.95606;EFF=INTERGENIC(MODIFIER||||||||||1) W706-3-1.SNP.8:19484300 chr08:019484300 0 W/19484300-19484300 W706-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN-188.SNP.8:19484464 chr08:019484464 0 W/19484464-19484464 FN-188 Single Base Substitution A-T INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1154-S.SNP.8:19486616 chr08:019486616 0 W/19486616-19486616 FN1154-S Single Base Substitution C-G INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN2660-S.SNP.8:19492637 chr08:019492637 0 W/19492637-19492637 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.958027;DP=4162;DP4=2051,1903,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.26679e-17;MQSB=0.974804;RPB=0.212155;SGB=118.737;VDB=0.241933;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L52|143|LOC_Os08g31520|protein_coding|CODING|LOC_Os08g31520.1|2|1) FN-218.SNP.8:19496174 chr08:019496174 0 W/19496174-19496174 FN-218 Single Base Substitution C-A INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN_788-1-1.SNP.8:19499521 chr08:019499521 0 W/19499521-19499521 FN_788-1-1 Single Base Substitution G-A Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1644-S.SNP.8:19499969 chr08:019499969 0 W/19499969-19499969 FN1644-S Single Base Substitution A-C INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1546-S.SNP.8:19508921 chr08:019508921 0 W/19508921-19508921 FN1546-S Single Base Substitution A-T INTRON HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN3540-S.SNP.8:19513012 chr08:019513012 0 W/19513012-19513012 FN3540-S SNP G -> T AC=2;AN=188;BQB=0.929435;DP=3230;DP4=1373,1749,17,18;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0309598;MQB=4.27685e-10;MQSB=0.239398;RPB=0.908258;SGB=113.937;VDB=0.55401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3540-S.SNP.8:19513013 chr08:019513013 0 W/19513013-19513013 FN3540-S SNP C -> T AC=2;AN=188;BQB=0.99983;DP=3234;DP4=1378,1765,17,18;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.030303;MQB=1.12377e-10;MQSB=0.27378;RPB=0.922763;SGB=153.475;VDB=0.568278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.8:19513430 chr08:019513430 0 W/19513430-19513430 FN2698-S SNP G -> T AC=1;AN=200;BQB=0.857281;DP=5040;DP4=2396,2306,9,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00198413;MQB=0.00310554;MQSB=0.992864;RPB=0.541277;SGB=65.5058;VDB=0.986427;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.8:19518774 chr08:019518774 0 W/19518774-19518774 FN687-S Single Base Substitution G-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN687-S.SNP.8:19518775 chr08:019518775 0 W/19518775-19518775 FN687-S Single Base Substitution G-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3563-S.SNP.8:19520755 chr08:019520755 0 W/19520755-19520755 FN3563-S SNP A -> G AC=1;AN=188;BQB=0.977848;DP=2656;DP4=1449,1114,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.95528e-10;MQSB=0.998015;RPB=0.945775;SGB=46.6141;VDB=0.971745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.8:19527798 chr08:019527798 0 W/19527798-19527798 FN2583-S SNP A -> T AC=1;AN=200;BQB=0.831736;DP=4916;DP4=2451,2205,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.0273e-10;MQSB=0.697983;RPB=0.837466;SGB=47.4799;VDB=0.0870779;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A321|444|LOC_Os08g31560|protein_coding|CODING|LOC_Os08g31560.1|10|1) FN810-S.SNP.8:19528591 chr08:019528591 0 W/19528591-19528591 FN810-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3993-S.SNP.8:19539649 chr08:019539649 0 W/19539649-19539649 FN3993-S SNP T -> A AC=1;AN=168;BQB=0.928029;DP=2624;DP4=1349,1118,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.07077e-09;MQSB=0.685301;RPB=0.532178;SGB=22.1847;VDB=0.273624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.8:19542789 chr08:019542789 0 W/19542789-19542789 FN3752-S SNP G -> T AC=2;AN=190;BQB=0.721123;DP=2525;DP4=937,1470,14,11;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0019802;MQB=0.00075326;MQSB=0.000117263;RPB=0.959413;SGB=78.7471;VDB=0.833071;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.8:19543233 chr08:019543233 0 W/19543233-19543233 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2320.SNP.8:19543553 chr08:019543553 0 W/19543553-19543553 FN2320 SNP C -> T AC=1;AN=192;BQB=0.979519;DP=4906;DP4=2513,2097,18,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.00258e-12;MQSB=0.56101;RPB=0.725423;SGB=19.8696;VDB=0.834155;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.8:19543893 chr08:019543893 0 W/19543893-19543893 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.998731;DP=2551;DP4=1276,1197,21,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29256e-12;MQSB=0.56156;RPB=0.938018;SGB=51.3545;VDB=0.5567;EFF=INTERGENIC(MODIFIER||||||||||1) FN-272.SNP.8:19544909 chr08:019544909 0 W/19544909-19544909 FN-272 Single Base Substitution G-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN810-S.SNP.8:19546808 chr08:019546808 0 W/19546808-19546808 FN810-S Single Base Substitution A-G INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN1540-S.SNP.8:19553328 chr08:019553328 0 W/19553328-19553328 FN1540-S Single Base Substitution A-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1453-S.SNP.8:19555953 chr08:019555953 0 W/19555953-19555953 FN1453-S Single Base Substitution G-A INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN3306-S.SNP.8:19562622 chr08:019562622 0 W/19562622-19562622 FN3306-S SNP C -> A AC=1;AN=184;BQB=0.993262;DP=2989;DP4=1650,1220,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.44633e-09;MQSB=0.79072;RPB=0.88911;SGB=66.8296;VDB=0.773282;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.8:19566291 chr08:019566291 0 W/19566291-19566291 FN1602-S Single Base Substitution C-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1008-S.SNP.8:19566365 chr08:019566365 0 W/19566365-19566365 FN1008-S Single Base Substitution G-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1636-S.SNP.8:19573837 chr08:019573837 0 W/19573837-19573837 FN1636-S Single Base Substitution C-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2797-S.SNP.8:19580680 chr08:019580680 0 W/19580680-19580680 FN2797-S SNP T -> C AC=1;AN=198;BQB=0.999831;DP=4019;DP4=1852,1842,18,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.09696e-13;MQSB=0.45403;RPB=0.579587;SGB=65.676;VDB=0.263195;EFF=UTR_3_PRIME(MODIFIER||112||297|LOC_Os08g31630|protein_coding|CODING|LOC_Os08g31630.2|7|1),INTRON(MODIFIER||||370|LOC_Os08g31630|protein_coding|CODING|LOC_Os08g31630.1|7|1) FN3427-S.SNP.8:19584375 chr08:019584375 0 W/19584375-19584375 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.830139;DP=2575;DP4=1385,1078,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30181e-06;MQSB=0.803689;RPB=0.596954;SGB=39.699;VDB=0.971551;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.8:19590024 chr08:019590024 0 W/19590024-19590024 FN725-S Single Base Substitution G-A INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN3781-S.SNP.8:19595099 chr08:019595099 0 W/19595099-19595099 FN3781-S SNP G -> C AC=2;AN=190;BQB=0.686504;DP=2501;DP4=933,1444,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.23441e-14;MQSB=0.993987;RPB=0.960723;SGB=68.0854;VDB=0.871267;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.8:19595105 chr08:019595105 0 W/19595105-19595105 FN3781-S SNP G -> A AC=2;AN=190;BQB=0.995746;DP=2515;DP4=935,1482,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.07604e-15;MQSB=0.998636;RPB=0.997414;SGB=71.6393;VDB=0.633164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3781-S.SNP.8:19595106 chr08:019595106 0 W/19595106-19595106 FN3781-S SNP G -> A AC=2;AN=190;BQB=0.559139;DP=2515;DP4=928,1475,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.00922e-12;MQSB=0.979461;RPB=0.955501;SGB=76.4186;VDB=0.672706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.8:19595189 chr08:019595189 0 W/19595189-19595189 FN3600-S SNP C -> T AC=1;AN=190;BQB=0.950228;DP=2197;DP4=926,1172,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00140824;MQSB=0.801653;RPB=0.236677;SGB=26.3271;VDB=0.278975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.8:19595826 chr08:019595826 0 W/19595826-19595826 FN1755-S SNP G -> A AC=1;AN=188;BQB=0.63845;DP=2519;DP4=811,1646,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68149e-06;MQSB=0.823971;RPB=0.27429;SGB=-35.9944;VDB=0.344482;EFF=INTRON(MODIFIER||||50|LOC_Os08g31649|protein_coding|CODING|LOC_Os08g31649.1|1|1) W502-3-4.SNP.8:19608966 chr08:019608966 0 W/19608966-19608966 W502-3-4 Single Base Substitution C-T INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN-217.SNP.8:19612255 chr08:019612255 0 W/19612255-19612255 FN-217 Single Base Substitution C-G INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1284-S.SNP.8:19623001 chr08:019623001 0 W/19623001-19623001 FN1284-S Single Base Substitution C-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2218-S.SNP.8:19624639 chr08:019624639 0 W/19624639-19624639 FN2218-S SNP C -> T AC=2;AN=190;BQB=0.226825;DP=5149;DP4=2609,2284,23,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.82801e-29;MQSB=0.998791;RPB=0.611731;SGB=5.60984;VDB=0.21271;EFF=INTERGENIC(MODIFIER||||||||||1) FN-118.SNP.8:19625126 chr08:019625126 0 W/19625126-19625126 FN-118 Single Base Substitution G-A INTERGENIC HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN1550-S.SNP.8:19625848 chr08:019625848 0 W/19625848-19625848 FN1550-S Single Base Substitution A-G INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1550-S.SNP.8:19625850 chr08:019625850 0 W/19625850-19625850 FN1550-S Single Base Substitution C-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN4177-S.SNP.8:19629271 chr08:019629271 0 W/19629271-19629271 FN4177-S SNP G -> T AC=2;AN=170;BQB=0.992615;DP=2956;DP4=1754,1103,25,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.81695e-21;MQSB=0.969748;RPB=0.957285;SGB=167.824;VDB=0.429431;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.8:19636259 chr08:019636259 0 W/19636259-19636259 FN598-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g31680 retrotransposon protein, putative, unclassified, expressed SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3606-S.SNP.8:19639169 chr08:019639169 0 W/19639169-19639169 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.991479;DP=2889;DP4=1408,1364,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.99644e-07;MQSB=0.998822;RPB=0.990934;SGB=49.0954;VDB=0.815244;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G482S|1427|LOC_Os08g31680|protein_coding|CODING|LOC_Os08g31680.1|5|1) FN2123-S.SNP.8:19647221 chr08:019647221 0 W/19647221-19647221 FN2123-S SNP C -> T AC=1;AN=168;BQB=7.29633e-06;DP=3563;DP4=1563,1940,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000126323;MQSB=0.994496;RPB=0.997375;SGB=-311.457;VDB=0.859448;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.8:19649891 chr08:019649891 0 W/19649891-19649891 FN2151-S SNP A -> G AC=1;AN=168;BQB=0.00823674;DP=3693;DP4=2002,1643,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.26995e-05;MQSB=0.966681;RPB=0.131244;SGB=-108.641;VDB=0.748755;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.8:19649931 chr08:019649931 0 W/19649931-19649931 FN-160 Single Base Substitution A-T INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN3579-S.SNP.8:19654175 chr08:019654175 0 W/19654175-19654175 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.908782;DP=3095;DP4=1603,1414,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.0561e-10;MQSB=0.642154;RPB=0.551303;SGB=46.6141;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.8:19659144 chr08:019659144 0 W/19659144-19659144 FN2429 SNP G -> A AC=1;AN=200;BQB=0.997291;DP=5020;DP4=2381,2273,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.87945e-21;MQSB=0.997036;RPB=0.861293;SGB=71.1676;VDB=0.135908;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.8:19662077 chr08:019662077 0 W/19662077-19662077 FN1334-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1516-S.SNP.8:19668533 chr08:019668533 0 W/19668533-19668533 FN1516-S Single Base Substitution T-G INTRON HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN763-S.SNP.8:19680201 chr08:019680201 0 W/19680201-19680201 FN763-S Single Base Substitution C-G INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1135-S.SNP.8:19681060 chr08:019681060 0 W/19681060-19681060 FN1135-S Single Base Substitution A-G INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3485-S.SNP.8:19683360 chr08:019683360 0 W/19683360-19683360 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.905881;DP=2696;DP4=2186,425,17,1;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.8514e-12;MQSB=0.689041;RPB=0.848602;SGB=75.8731;VDB=0.0400402;EFF=UTR_5_PRIME(MODIFIER||14||482|LOC_Os08g31760|protein_coding|CODING|LOC_Os08g31760.1|1|1) FN3485-S.SNP.8:19683363 chr08:019683363 0 W/19683363-19683363 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.739549;DP=2692;DP4=2189,436,18,2;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.9848e-13;MQSB=0.52836;RPB=0.692279;SGB=84.9167;VDB=0.0548888;EFF=UTR_5_PRIME(MODIFIER||11||482|LOC_Os08g31760|protein_coding|CODING|LOC_Os08g31760.1|1|1) FN831-S.SNP.8:19685117 chr08:019685117 0 W/19685117-19685117 FN831-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN4109-S.SNP.8:19718571 chr08:019718571 0 W/19718571-19718571 FN4109-S SNP G -> C AC=1;AN=182;BQB=0.976906;DP=2975;DP4=1637,1265,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=1.75315e-07;MQSB=0.976283;RPB=0.430216;SGB=25.655;VDB=0.299629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A187G|961|LOC_Os08g31800|protein_coding|CODING|LOC_Os08g31800.1|1|1) FN2088-S.SNP.8:19741974 chr08:019741974 0 W/19741974-19741974 FN2088-S SNP A -> T AC=1;AN=168;BQB=0.607915;DP=4101;DP4=2046,2022,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=5.30215e-13;MQSB=0.689936;RPB=0.69522;SGB=-12.7876;VDB=0.538774;EFF=INTRON(MODIFIER||||382|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.1|5|1),INTRON(MODIFIER||||284|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.2|5|1),INTRON(MODIFIER||||382|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.3|5|1),INTRON(MODIFIER||||260|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.4|5|1) FN2782-S.SNP.8:19742921 chr08:019742921 0 W/19742921-19742921 FN2782-S SNP T -> C AC=1;AN=198;BQB=0.736551;DP=4071;DP4=2010,1891,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=0.000199351;MQSB=0.692521;RPB=0.918017;SGB=14.1348;VDB=0.942575;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L99|382|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L99|284|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L99|382|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.3|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L99|260|LOC_Os08g31840|protein_coding|CODING|LOC_Os08g31840.4|3|1) FN765-S.SNP.8:19811355 chr08:019811355 0 W/19811355-19811355 FN765-S Single Base Substitution G-T INTERGENIC HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN4047-S.SNP.8:19817422 chr08:019817422 0 W/19817422-19817422 FN4047-S SNP T -> C AC=2;AN=168;BQB=0.43965;DP=2607;DP4=1426,1026,15,11;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.57933e-07;MQSB=0.616589;RPB=0.75137;SGB=18.4989;VDB=0.843704;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.8:19829071 chr08:019829071 0 W/19829071-19829071 FN1023-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g31970 NHL repeat-containing protein, putative, expressed SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1550-S.SNP.8:19832768 chr08:019832768 0 W/19832768-19832768 FN1550-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g31980 trehalose-6-phosphate synthase, putative, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2441.SNP.8:19835415 chr08:019835415 0 W/19835415-19835415 FN2441 SNP T -> C AC=2;AN=200;BQB=0.977001;DP=4826;DP4=1912,2212,23,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.04275e-29;MQSB=0.898791;RPB=0.778408;SGB=133.692;VDB=0.853821;EFF=INTRON(MODIFIER||||862|LOC_Os08g31980|protein_coding|CODING|LOC_Os08g31980.1|1|1) FN1124-S.SNP.8:19837162 chr08:019837162 0 W/19837162-19837162 FN1124-S Single Base Substitution C-T INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1002-S.SNP.8:19839127 chr08:019839127 0 W/19839127-19839127 FN1002-S Single Base Substitution A-C INTERGENIC HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN-36.SNP.8:19842948 chr08:019842948 0 W/19842948-19842948 FN-36 Single Base Substitution T-A INTRON Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1759-S.SNP.8:19843003 chr08:019843003 0 W/19843003-19843003 FN1759-S SNP C -> T AC=1;AN=188;BQB=0.828622;DP=4225;DP4=1930,2263,14,6;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.00189349;MQB=0.681704;MQSB=0.000113886;RPB=0.277848;SGB=60.7873;VDB=0.767656;EFF=INTRON(MODIFIER||||82|LOC_Os08g31990|protein_coding|CODING|LOC_Os08g31990.1|1|1) FN2749-S.SNP.8:19846753 chr08:019846753 0 W/19846753-19846753 FN2749-S SNP T -> C AC=2;AN=200;BQB=0.911732;DP=5268;DP4=2524,2410,21,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.72097e-20;MQSB=0.840003;RPB=0.884933;SGB=84.1935;VDB=0.293411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2355.SNP.8:19851965 chr08:019851965 0 W/19851965-19851965 FN2355 SNP C -> T AC=2;AN=192;BQB=0.0663102;DP=4586;DP4=2209,2076,21,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.69168e-19;MQSB=0.797932;RPB=0.839205;SGB=-44.9121;VDB=0.66617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.8:19854187 chr08:019854187 0 W/19854187-19854187 FN1538-S Single Base Substitution G-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2600-S.SNP.8:19854187 chr08:019854187 0 W/19854187-19854187 FN2600-S SNP G -> A AC=1;AN=198;BQB=0.0709494;DP=3628;DP4=1661,1727,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00318052;MQSB=0.966945;RPB=0.976172;SGB=16.3688;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:19854187 chr08:019854187 0 W/19854187-19854187 FN3696-S SNP G -> A AC=2;AN=190;BQB=0.811843;DP=2250;DP4=1241,872,19,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.06999e-12;MQSB=0.914497;RPB=0.944015;SGB=82.301;VDB=0.648839;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.8:19854187 chr08:019854187 0 W/19854187-19854187 FN4163-S SNP G -> A AC=2;AN=170;BQB=0.85819;DP=2095;DP4=1078,949,14,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.13215e-13;MQSB=0.996239;RPB=0.240786;SGB=62.4192;VDB=0.94467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.8:19855094 chr08:019855094 0 W/19855094-19855094 FN2429 SNP T -> C AC=1;AN=200;BQB=0.704408;DP=4560;DP4=2046,2158,11,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.48709e-19;MQSB=0.937157;RPB=0.595993;SGB=65.9573;VDB=0.387325;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.8:19856609 chr08:019856609 0 W/19856609-19856609 W470-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1642-S.SNP.8:19859557 chr08:019859557 0 W/19859557-19859557 FN1642-S Single Base Substitution C-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-232.SNP.8:19863755 chr08:019863755 0 W/19863755-19863755 FN-232 Single Base Substitution C-T STOP_GAINED HET LOC_Os08g32020 retrotransposon protein, putative, unclassified, expressed SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1229-S.SNP.8:19863755 chr08:019863755 0 W/19863755-19863755 FN1229-S Single Base Substitution C-T STOP_GAINED HET LOC_Os08g32020 retrotransposon protein, putative, unclassified, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1375-S.SNP.8:19865365 chr08:019865365 0 W/19865365-19865365 FN1375-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g32020 retrotransposon protein, putative, unclassified, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3556-S.SNP.8:19866119 chr08:019866119 0 W/19866119-19866119 FN3556-S SNP G -> A AC=1;AN=188;BQB=0.839332;DP=3230;DP4=1579,1571,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74302e-15;MQSB=0.98075;RPB=0.631851;SGB=112.585;VDB=0.284417;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.8:19868738 chr08:019868738 0 W/19868738-19868738 FN-207 Single Base Substitution G-A INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1697-S.SNP.8:19869715 chr08:019869715 0 W/19869715-19869715 FN1697-S SNP C -> G AC=1;AN=188;BQB=0.201361;DP=1938;DP4=1028,878,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0134159;MQB=0.00664738;MQSB=0.00515193;RPB=0.99563;SGB=-0.634963;VDB=0.645013;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K250N|288|LOC_Os08g32040|protein_coding|CODING|LOC_Os08g32040.1|1|1) FN2239-S.SNP.8:19870781 chr08:019870781 0 W/19870781-19870781 FN2239-S SNP G -> A AC=2;AN=190;BQB=0.989154;DP=4444;DP4=2339,1819,11,10;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=8.67069e-08;MQSB=0.970684;RPB=0.980956;SGB=64.5316;VDB=0.58672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.8:19871284 chr08:019871284 0 W/19871284-19871284 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.58634;DP=1880;DP4=588,1248,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.27565e-06;MQSB=0.989484;RPB=0.0706566;SGB=1.32907;VDB=0.0883424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.8:19874833 chr08:019874833 0 W/19874833-19874833 FN1505-S Single Base Substitution A-G INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2167-S.SNP.8:19880368 chr08:019880368 0 W/19880368-19880368 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.961297;DP=3472;DP4=1849,1591,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.32685e-07;MQSB=0.984364;RPB=0.549393;SGB=43.3113;VDB=0.493163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.8:19881105 chr08:019881105 0 W/19881105-19881105 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.863518;DP=3498;DP4=1948,1442,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27726e-13;MQSB=0.878592;RPB=0.0825926;SGB=70.9657;VDB=0.756289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.8:19887613 chr08:019887613 0 W/19887613-19887613 FN2300 SNP C -> G AC=1;AN=192;BQB=0.921674;DP=4476;DP4=2123,2096,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.40073e-08;MQSB=0.00335537;RPB=0.931345;SGB=72.0322;VDB=0.402928;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G61|349|LOC_Os08g32080|protein_coding|CODING|LOC_Os08g32080.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G61|349|LOC_Os08g32085|protein_coding|CODING|LOC_Os08g32085.1|2|1) FN-402.SNP.8:19888589 chr08:019888589 0 W/19888589-19888589 FN-402 Single Base Substitution C-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3981-S.SNP.8:19892632 chr08:019892632 0 W/19892632-19892632 FN3981-S SNP T -> C AC=2;AN=168;BQB=0.944132;DP=2515;DP4=1194,1196,15,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.69919e-10;MQSB=0.41974;RPB=0.293979;SGB=87.6193;VDB=0.240576;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.8:19895117 chr08:019895117 0 W/19895117-19895117 FN-408 Single Base Substitution G-T INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.8:19895117 chr08:019895117 0 W/19895117-19895117 FN408-S Single Base Substitution G-T INTERGENIC HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN-408.SNP.8:19895118 chr08:019895118 0 W/19895118-19895118 FN-408 Single Base Substitution T-G INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.8:19895118 chr08:019895118 0 W/19895118-19895118 FN408-S Single Base Substitution T-G INTERGENIC HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN3407-S.SNP.8:19895922 chr08:019895922 0 W/19895922-19895922 FN3407-S SNP C -> A AC=2;AN=184;BQB=0.999979;DP=2801;DP4=1541,1152,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.20422e-10;MQSB=0.590656;RPB=0.373177;SGB=42.7914;VDB=0.850592;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.8:19895927 chr08:019895927 0 W/19895927-19895927 FN3407-S SNP G -> A AC=2;AN=184;BQB=0.925872;DP=2788;DP4=1541,1157,7,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27461e-08;MQSB=0.784787;RPB=0.538933;SGB=53.2642;VDB=0.848275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.8:19909146 chr08:019909146 0 W/19909146-19909146 FN2195-S SNP T -> C AC=2;AN=190;BQB=0.554227;DP=3921;DP4=1659,1769,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.46712e-10;MQSB=0.927184;RPB=0.702359;SGB=57.4238;VDB=0.404495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.8:19910688 chr08:019910688 0 W/19910688-19910688 FN2719-S SNP G -> A AC=1;AN=200;BQB=0.948281;DP=4955;DP4=2190,2490,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.5176e-14;MQSB=0.951464;RPB=0.760759;SGB=52.9314;VDB=0.490627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1522-S.SNP.8:19922992 chr08:019922992 0 W/19922992-19922992 FN1522-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g32110 expressed protein SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN4231-S.SNP.8:19930292 chr08:019930292 0 W/19930292-19930292 FN4231-S SNP T -> C AC=2;AN=170;BQB=0.999412;DP=2329;DP4=1233,1026,15,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.54413e-11;MQSB=0.79512;RPB=0.47242;SGB=62.4192;VDB=0.206137;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.8:19932720 chr08:019932720 0 W/19932720-19932720 FN3833-S SNP G -> A AC=1;AN=190;BQB=0.773057;DP=3002;DP4=1355,1523,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12681e-06;MQSB=0.999939;RPB=0.948446;SGB=53.6492;VDB=0.683665;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.8:19933281 chr08:019933281 0 W/19933281-19933281 FN318-S Single Base Substitution T-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN3287-S.SNP.8:19946813 chr08:019946813 0 W/19946813-19946813 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.904744;DP=2656;DP4=1066,1479,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.103916;MQB=0.37971;MQSB=0;RPB=0.429464;SGB=53.2642;VDB=0.456033;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G84R|123|LOC_Os08g32150|protein_coding|CODING|LOC_Os08g32150.1|1|1),SPLICE_SITE_REGION(LOW||||123|LOC_Os08g32150|protein_coding|CODING|LOC_Os08g32150.1|1|1) FN1679-S.SNP.8:19947571 chr08:019947571 0 W/19947571-19947571 FN1679-S SNP G -> A AC=1;AN=188;BQB=0.0823759;DP=3511;DP4=1767,1695,16,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.90107e-11;MQSB=0.933186;RPB=0.456755;SGB=-73.5561;VDB=0.169432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.8:19950223 chr08:019950223 0 W/19950223-19950223 FN1610-S Single Base Substitution T-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN861-S.SNP.8:19950721 chr08:019950721 0 W/19950721-19950721 FN861-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN3965-S.SNP.8:19974140 chr08:019974140 0 W/19974140-19974140 FN3965-S SNP T -> A AC=1;AN=166;BQB=0.861371;DP=590;DP4=565,3,10,0;HOB=7.25795e-05;ICB=0.000146033;MQ=48;MQ0F=0;MQB=0.000380433;MQSB=0.942822;RPB=0.929283;SGB=36.6932;VDB=0.00875562;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L131*|221|LOC_Os08g32220|protein_coding|CODING|LOC_Os08g32220.1|2|1) W23-2-1.SNP.8:19978891 chr08:019978891 0 W/19978891-19978891 W23-2-1 Single Base Substitution C-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN1666-S.SNP.8:19980036 chr08:019980036 0 W/19980036-19980036 FN1666-S SNP G -> T AC=1;AN=188;BQB=0.108974;DP=3221;DP4=1421,1767,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.53492e-07;MQSB=0.934976;RPB=0.313174;SGB=-67.7293;VDB=0.249223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q310K|596|LOC_Os08g32250|protein_coding|CODING|LOC_Os08g32250.1|2|1) FN-287.SNP.8:19987271 chr08:019987271 0 W/19987271-19987271 FN-287 Single Base Substitution T-A INTRON HOMO SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2289.SNP.8:19987271 chr08:019987271 0 W/19987271-19987271 FN2289 SNP T -> A AC=2;AN=192;BQB=0.286;DP=5648;DP4=2175,2938,29,30;HOB=0.0206163;ICB=0.494846;MQ=37;MQ0F=0.0237252;MQB=0.994906;MQSB=0;RPB=0.332195;SGB=200.176;VDB=0.959281;EFF=INTRON(MODIFIER||||970|LOC_Os08g32260|protein_coding|CODING|LOC_Os08g32260.1|3|1) FN_N1-26-1.SNP.8:19987271 chr08:019987271 0 W/19987271-19987271 FN_N1-26-1 Single Base Substitution T-A HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN3577-S.SNP.8:19989899 chr08:019989899 0 W/19989899-19989899 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.942236;DP=2820;DP4=1490,1218,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.47055e-05;MQSB=0.910408;RPB=0.620014;SGB=30.8063;VDB=0.952594;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S393|970|LOC_Os08g32260|protein_coding|CODING|LOC_Os08g32260.1|3|1) FN2408.SNP.8:19991914 chr08:019991914 0 W/19991914-19991914 FN2408 SNP A -> T AC=1;AN=200;BQB=0.834615;DP=4681;DP4=2449,1854,4,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000854518;MQB=0.0138918;MQSB=0.00231118;RPB=0.900469;SGB=25.849;VDB=0.356498;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.8:19991951 chr08:019991951 0 W/19991951-19991951 FN4231-S SNP A -> C AC=2;AN=170;BQB=0.993182;DP=2669;DP4=1291,1311,12,12;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00299738;MQB=3.20144e-10;MQSB=0.0898469;RPB=0.153276;SGB=101.184;VDB=0.175494;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.8:19992492 chr08:019992492 0 W/19992492-19992492 FN927-S Single Base Substitution C-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1309-S.SNP.8:19995242 chr08:019995242 0 W/19995242-19995242 FN1309-S Single Base Substitution A-G INTRON HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN4031-S.SNP.8:19996128 chr08:019996128 0 W/19996128-19996128 FN4031-S SNP T -> A AC=2;AN=168;BQB=0.414665;DP=2371;DP4=1185,1087,19,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.04143e-14;MQSB=0.974946;RPB=0.944914;SGB=136.358;VDB=0.492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.8:20001320 chr08:020001320 0 W/20001320-20001320 FN1650-S Single Base Substitution C-T INTRON HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN777-S.SNP.8:20005840 chr08:020005840 0 W/20005840-20005840 FN777-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g32290 expressed protein SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN708-S.SNP.8:20024673 chr08:020024673 0 W/20024673-20024673 FN708-S Single Base Substitution T-C INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3799-S.SNP.8:20030597 chr08:020030597 0 W/20030597-20030597 FN3799-S SNP T -> C AC=1;AN=190;BQB=0.999523;DP=2665;DP4=1379,1192,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.95931e-08;MQSB=0.990492;RPB=0.364006;SGB=58.2031;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.8:20030597 chr08:020030597 0 W/20030597-20030597 FN3861-S SNP T -> C AC=2;AN=158;BQB=0.971423;DP=2419;DP4=1204,1099,8,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.77125e-11;MQSB=0.980271;RPB=0.840779;SGB=50.9207;VDB=0.178358;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.8:20045236 chr08:020045236 0 W/20045236-20045236 FN-87 Single Base Substitution G-A INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN594-S.SNP.8:20054002 chr08:020054002 0 W/20054002-20054002 FN594-S Single Base Substitution G-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN1277-S.SNP.8:20082779 chr08:020082779 0 W/20082779-20082779 FN1277-S Single Base Substitution G-A INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1085-S.SNP.8:20094347 chr08:020094347 0 W/20094347-20094347 FN1085-S Single Base Substitution C-T INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN926-S.SNP.8:20096441 chr08:020096441 0 W/20096441-20096441 FN926-S Single Base Substitution G-A INTRON HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN_N1-130-1.SNP.8:20114654 chr08:020114654 0 W/20114654-20114654 FN_N1-130-1 Single Base Substitution C-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN451-S.SNP.8:20116999 chr08:020116999 0 W/20116999-20116999 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-279.SNP.8:20125684 chr08:020125684 0 W/20125684-20125684 FN-279 Single Base Substitution C-T INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN_831-4-1.SNP.8:20128193 chr08:020128193 0 W/20128193-20128193 FN_831-4-1 Single Base Substitution G-A Homo LOC_Os08g32490 expressed protein SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. W247-2-1.SNP.8:20132041 chr08:020132041 0 W/20132041-20132041 W247-2-1 Single Base Substitution C-G INTRON HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1715-S.SNP.8:20155932 chr08:020155932 0 W/20155932-20155932 FN1715-S SNP T -> A AC=2;AN=188;BQB=0.0411379;DP=2198;DP4=1226,939,15,11;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.000454959;MQB=0.836435;MQSB=0.00784658;RPB=0.997671;SGB=-40.1048;VDB=0.00135046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.8:20185597 chr08:020185597 0 W/20185597-20185597 FN1215-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g32590 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1215-S.SNP.8:20185598 chr08:020185598 0 W/20185598-20185598 FN1215-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2448.SNP.8:20187899 chr08:020187899 0 W/20187899-20187899 FN2448 SNP T -> C AC=1;AN=200;BQB=0.983907;DP=4932;DP4=2500,2200,8,10;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0;MQB=2.8372e-06;MQSB=0.383406;RPB=0.34177;SGB=77.2904;VDB=0.56961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I637V|690|LOC_Os08g32600|protein_coding|CODING|LOC_Os08g32600.1|15|1) FN3978-S.SNP.8:20190514 chr08:020190514 0 W/20190514-20190514 FN3978-S SNP A -> G AC=1;AN=168;BQB=0.999883;DP=2512;DP4=1324,1096,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0;MQB=0.32105;MQSB=8.48694e-12;RPB=0.0428134;SGB=41.6096;VDB=0.0103883;EFF=INTRON(MODIFIER||||690|LOC_Os08g32600|protein_coding|CODING|LOC_Os08g32600.1|7|1) FN2219-S.SNP.8:20198673 chr08:020198673 0 W/20198673-20198673 FN2219-S SNP C -> G AC=1;AN=190;BQB=0.852227;DP=4950;DP4=2342,2286,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000501253;MQSB=1.63476e-16;RPB=0.998061;SGB=39.9877;VDB=0.826152;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.8:20203369 chr08:020203369 0 W/20203369-20203369 FN456-S Single Base Substitution A-T INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN4249-S.SNP.8:20208025 chr08:020208025 0 W/20208025-20208025 FN4249-S SNP G -> A AC=1;AN=170;BQB=0.70885;DP=2437;DP4=1066,1314,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.43912e-09;MQSB=0.999864;RPB=0.537545;SGB=24.7692;VDB=0.65825;EFF=UTR_3_PRIME(MODIFIER||2712||141|LOC_Os08g32620|protein_coding|CODING|LOC_Os08g32620.2|4|1),UTR_3_PRIME(MODIFIER||381||216|LOC_Os08g32620|protein_coding|CODING|LOC_Os08g32620.1|5|1),UTR_3_PRIME(MODIFIER||381||186|LOC_Os08g32620|protein_coding|CODING|LOC_Os08g32620.3|5|1),UTR_3_PRIME(MODIFIER||381||186|LOC_Os08g32620|protein_coding|CODING|LOC_Os08g32620.4|4|1) FN3729-S.SNP.8:20214784 chr08:020214784 0 W/20214784-20214784 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.797997;DP=2980;DP4=1479,1406,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85082e-10;MQSB=0.912716;RPB=0.227262;SGB=50.3161;VDB=0.13253;EFF=INTRON(MODIFIER||||614|LOC_Os08g32630|protein_coding|CODING|LOC_Os08g32630.1|6|1),INTRON(MODIFIER||||561|LOC_Os08g32630|protein_coding|CODING|LOC_Os08g32630.2|6|1),INTRON(MODIFIER||||553|LOC_Os08g32630|protein_coding|CODING|LOC_Os08g32630.3|6|1),INTRON(MODIFIER||||528|LOC_Os08g32630|protein_coding|CODING|LOC_Os08g32630.4|6|1),INTRON(MODIFIER||||451|LOC_Os08g32630|protein_coding|CODING|LOC_Os08g32630.5|5|1) W721-2-1.SNP.8:20218046 chr08:020218046 0 W/20218046-20218046 W721-2-1 Single Base Substitution C-T INTRON HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2651-S.SNP.8:20227075 chr08:020227075 0 W/20227075-20227075 FN2651-S SNP C -> T AC=2;AN=200;BQB=0.441949;DP=3740;DP4=1858,1620,18,22;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00160428;MQB=2.0495e-10;MQSB=0.00581834;RPB=0.376764;SGB=178.604;VDB=0.346328;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.8:20239438 chr08:020239438 0 W/20239438-20239438 FN-169 Single Base Substitution A-G INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3829-S.SNP.8:20243895 chr08:020243895 0 W/20243895-20243895 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.999054;DP=2949;DP4=1410,1413,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000339098;MQB=3.17285e-07;MQSB=0.620138;RPB=0.35009;SGB=58.2031;VDB=0.452817;EFF=INTRON(MODIFIER||||528|LOC_Os08g32680|protein_coding|CODING|LOC_Os08g32680.1|2|1) FN3795-S.SNP.8:20249890 chr08:020249890 0 W/20249890-20249890 FN3795-S SNP C -> A AC=2;AN=190;BQB=0.884108;DP=2928;DP4=1534,1270,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.20392e-12;MQSB=0.949775;RPB=0.776209;SGB=99.1879;VDB=0.561265;EFF=INTRON(MODIFIER||||231|LOC_Os08g32690|protein_coding|CODING|LOC_Os08g32690.1|5|1) FN1265-S.SNP.8:20257874 chr08:020257874 0 W/20257874-20257874 FN1265-S Single Base Substitution C-G INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1318-S.SNP.8:20259308 chr08:020259308 0 W/20259308-20259308 FN1318-S Single Base Substitution T-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN3928-S.SNP.8:20307741 chr08:020307741 0 W/20307741-20307741 FN3928-S SNP A -> T AC=1;AN=158;BQB=0.952002;DP=2504;DP4=1178,1174,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0634984;MQB=0.531123;MQSB=3.57164e-20;RPB=0.979083;SGB=38.3284;VDB=0.580586;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.8:20309267 chr08:020309267 0 W/20309267-20309267 FN875-S Single Base Substitution A-G INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN-274.SNP.8:20309935 chr08:020309935 0 W/20309935-20309935 FN-274 Single Base Substitution C-T INTERGENIC HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN983-S.SNP.8:20310050 chr08:020310050 0 W/20310050-20310050 FN983-S Single Base Substitution T-G INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1724-S.SNP.8:20312049 chr08:020312049 0 W/20312049-20312049 FN1724-S SNP T -> C AC=2;AN=188;BQB=0.78772;DP=2765;DP4=1843,873,23,7;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=9.93946e-08;MQSB=0.000682284;RPB=0.999262;SGB=61.6823;VDB=0.190533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.8:20312105 chr08:020312105 0 W/20312105-20312105 FN2260-S SNP C -> T AC=2;AN=190;BQB=0.45251;DP=4661;DP4=2313,1912,25,29;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.64396e-14;MQSB=0.00146059;RPB=0.744909;SGB=181.81;VDB=0.909964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.8:20312647 chr08:020312647 0 W/20312647-20312647 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.67046;DP=4648;DP4=2243,2098,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.67881e-05;MQSB=0.523161;RPB=0.718174;SGB=49.6594;VDB=0.40601;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S22|276|LOC_Os08g32780|protein_coding|CODING|LOC_Os08g32780.1|1|1) FN3854-S.SNP.8:20352007 chr08:020352007 0 W/20352007-20352007 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.11443;DP=2760;DP4=1289,1359,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.326636;MQSB=0.574806;RPB=0.232508;SGB=33.9591;VDB=0.176359;EFF=INTRON(MODIFIER||||277|LOC_Os08g32840|protein_coding|CODING|LOC_Os08g32840.1|1|1) FN2731-S.SNP.8:20352438 chr08:020352438 0 W/20352438-20352438 FN2731-S SNP T -> C AC=1;AN=200;BQB=0.941764;DP=4987;DP4=2367,2480,15,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.84215e-10;MQSB=0.00223015;RPB=0.998503;SGB=50.3263;VDB=0.481267;EFF=INTRON(MODIFIER||||277|LOC_Os08g32840|protein_coding|CODING|LOC_Os08g32840.1|2|1) FN527-S.SNP.8:20352667 chr08:020352667 0 W/20352667-20352667 FN527-S Single Base Substitution A-G INTRON HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1414-S.SNP.8:20357892 chr08:020357892 0 W/20357892-20357892 FN1414-S Single Base Substitution G-C INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2454.SNP.8:20358169 chr08:020358169 0 W/20358169-20358169 FN2454 SNP G -> C AC=2;AN=200;BQB=0.926725;DP=5046;DP4=2411,2249,25,16;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=2.75121e-17;MQSB=0.00135733;RPB=0.976523;SGB=137.609;VDB=0.0462908;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.8:20358169 chr08:020358169 0 W/20358169-20358169 FN898-S Single Base Substitution G-C INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN-106.SNP.8:20365134 chr08:020365134 0 W/20365134-20365134 FN-106 Single Base Substitution A-T INTRON HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN568-S.SNP.8:20366015 chr08:020366015 0 W/20366015-20366015 FN568-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g32850 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3356-S.SNP.8:20372394 chr08:020372394 0 W/20372394-20372394 FN3356-S SNP T -> A AC=1;AN=184;BQB=0.903978;DP=3260;DP4=1495,1664,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=1.95638e-05;MQSB=0.148218;RPB=0.744732;SGB=23.2751;VDB=0.202262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C92S|116|LOC_Os08g32860|protein_coding|CODING|LOC_Os08g32860.1|2|1) FN1026-S.SNP.8:20378470 chr08:020378470 0 W/20378470-20378470 FN1026-S Single Base Substitution C-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1257-S.SNP.8:20382903 chr08:020382903 0 W/20382903-20382903 FN1257-S Single Base Substitution A-G INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN897-S.SNP.8:20389512 chr08:020389512 0 W/20389512-20389512 FN897-S Single Base Substitution T-G INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN687-S.SNP.8:20390454 chr08:020390454 0 W/20390454-20390454 FN687-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2673-S.SNP.8:20397858 chr08:020397858 0 W/20397858-20397858 FN2673-S SNP C -> A AC=1;AN=200;BQB=0.891551;DP=5226;DP4=2553,2408,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64416e-10;MQSB=0.981136;RPB=0.826053;SGB=26.8797;VDB=0.169584;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P791Q|871|LOC_Os08g32890|protein_coding|CODING|LOC_Os08g32890.1|1|1) FN3542-S.SNP.8:20398983 chr08:020398983 0 W/20398983-20398983 FN3542-S SNP G -> A AC=1;AN=188;BQB=0.847733;DP=3017;DP4=1738,1193,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27964e-11;MQSB=0.997164;RPB=0.571848;SGB=76.2387;VDB=0.904596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.8:20399727 chr08:020399727 0 W/20399727-20399727 FN3516-S SNP A -> T AC=1;AN=188;BQB=0.612224;DP=3489;DP4=1981,1196,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.000100212;MQSB=0.00930803;RPB=0.41449;SGB=-35.081;VDB=0.096101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.8:20411796 chr08:020411796 0 W/20411796-20411796 FN1317-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g32920 dynamin-2B, putative, expressed SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN-226.SNP.8:20414675 chr08:020414675 0 W/20414675-20414675 FN-226 Single Base Substitution A-G INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2322.SNP.8:20417541 chr08:020417541 0 W/20417541-20417541 FN2322 SNP T -> G AC=2;AN=192;BQB=0.942038;DP=5141;DP4=2418,2485,14,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.35311e-14;MQSB=0.671098;RPB=0.660632;SGB=126.804;VDB=0.835902;EFF=INTRON(MODIFIER||||767|LOC_Os08g32920|protein_coding|CODING|LOC_Os08g32920.1|20|1) FN1555-S.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN1555-S Single Base Substitution G-A INTERGENIC Homo SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN2385.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN2385 SNP G -> A AC=2;AN=192;BQB=0.459116;DP=3837;DP4=1796,1814,24,25;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0;MQB=2.69233e-07;MQSB=0.52558;RPB=0.476543;SGB=164.532;VDB=0.014028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN3356-S SNP G -> A AC=2;AN=184;BQB=0.744539;DP=2102;DP4=1003,1028,7,5;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0;MQB=0.00501226;MQSB=0.0163673;RPB=0.999171;SGB=32.2261;VDB=0.204983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN3523-S SNP G -> A AC=2;AN=188;BQB=0.989006;DP=2077;DP4=964,1045,8,5;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0;MQB=0.00226752;MQSB=0.131791;RPB=0.935782;SGB=53.5223;VDB=0.130583;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN3714-S SNP G -> A AC=2;AN=190;BQB=0.657263;DP=2413;DP4=1117,1169,18,21;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0;MQB=2.34477e-07;MQSB=0.0878218;RPB=0.970632;SGB=166.6;VDB=0.00632676;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.8:20444446 chr08:020444446 0 W/20444446-20444446 FN790-S Single Base Substitution G-A INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN1079-S.SNP.8:20450604 chr08:020450604 0 W/20450604-20450604 FN1079-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1142-S.SNP.8:20459007 chr08:020459007 0 W/20459007-20459007 FN1142-S Single Base Substitution C-A INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1180-S.SNP.8:20465571 chr08:020465571 0 W/20465571-20465571 FN1180-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1108-S.SNP.8:20466247 chr08:020466247 0 W/20466247-20466247 FN1108-S Single Base Substitution T-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1548-S.SNP.8:20469216 chr08:020469216 0 W/20469216-20469216 FN1548-S SNP A -> G AC=2;AN=188;BQB=0.40872;DP=2332;DP4=1427,843,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.55954e-09;MQSB=0.991102;RPB=0.521059;SGB=-41.0182;VDB=0.905257;EFF=INTRON(MODIFIER||||248|LOC_Os08g32990|protein_coding|CODING|LOC_Os08g32990.1|1|1) FN3750-S.SNP.8:20471527 chr08:020471527 0 W/20471527-20471527 FN3750-S SNP A -> T AC=1;AN=190;BQB=0.94288;DP=2896;DP4=1478,1325,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.67129e-10;MQSB=0.942699;RPB=0.509847;SGB=57.4238;VDB=0.705566;EFF=INTRON(MODIFIER||||248|LOC_Os08g32990|protein_coding|CODING|LOC_Os08g32990.1|7|1) FN621-S.SNP.8:20473554 chr08:020473554 0 W/20473554-20473554 FN621-S Single Base Substitution G-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2499.SNP.8:20483449 chr08:020483449 0 W/20483449-20483449 FN2499 SNP A -> T AC=2;AN=200;BQB=0.230133;DP=4009;DP4=1634,1974,12,12;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=3.50643e-09;MQSB=0.580165;RPB=0.541929;SGB=104.921;VDB=0.345017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Atc|F3I|286|LOC_Os08g33020|protein_coding|CODING|LOC_Os08g33020.1|1|1) FN1707-S.SNP.8:20488083 chr08:020488083 0 W/20488083-20488083 FN1707-S SNP A -> G AC=1;AN=188;BQB=0.86996;DP=3639;DP4=2065,1549,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.74328e-07;MQSB=0.992989;RPB=0.6334;SGB=23.5329;VDB=0.233892;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.8:20494196 chr08:020494196 0 W/20494196-20494196 FN4249-S SNP T -> C AC=1;AN=170;BQB=0.99246;DP=2183;DP4=870,1238,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0;MQB=0.000573666;MQSB=0.677302;RPB=0.783747;SGB=27.2119;VDB=0.306219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.8:20498493 chr08:020498493 0 W/20498493-20498493 FN1401-S Single Base Substitution A-G INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-180.SNP.8:20499483 chr08:020499483 0 W/20499483-20499483 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3679-S.SNP.8:20501964 chr08:020501964 0 W/20501964-20501964 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.994736;DP=2333;DP4=1027,1241,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08156e-12;MQSB=0.978961;RPB=0.995973;SGB=57.4238;VDB=0.327903;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.8:20509217 chr08:020509217 0 W/20509217-20509217 FN774-S Single Base Substitution A-G INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3941-S.SNP.8:20511414 chr08:020511414 0 W/20511414-20511414 FN3941-S SNP G -> A AC=2;AN=168;BQB=0.463087;DP=1981;DP4=1151,746,6,4;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00706714;MQB=0.00955847;MQSB=0.98963;RPB=0.458628;SGB=38.8805;VDB=0.895256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.8:20513852 chr08:020513852 0 W/20513852-20513852 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.844751;DP=4975;DP4=2481,2227,19,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0108543;MQB=6.26963e-06;MQSB=0.115567;RPB=0.892442;SGB=146.368;VDB=0.485037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V531M|1500|LOC_Os08g33040|protein_coding|CODING|LOC_Os08g33040.1|4|1),SPLICE_SITE_REGION(LOW||||1500|LOC_Os08g33040|protein_coding|CODING|LOC_Os08g33040.1|4|1) FN1366-S.SNP.8:20521428 chr08:020521428 0 W/20521428-20521428 FN1366-S Single Base Substitution A-G INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN1707-S.SNP.8:20521717 chr08:020521717 0 W/20521717-20521717 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.994022;DP=1940;DP4=926,973,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.90338e-06;MQSB=0.872795;RPB=0.999901;SGB=2.45162;VDB=0.262455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.8:20522155 chr08:020522155 0 W/20522155-20522155 FN2324 SNP G -> A AC=1;AN=192;BQB=0.620399;DP=3976;DP4=1907,1735,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000503018;MQB=1.26167e-07;MQSB=0.0780151;RPB=0.344707;SGB=-12.5113;VDB=0.933948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.8:20522157 chr08:020522157 0 W/20522157-20522157 FN2324 SNP T -> C AC=1;AN=192;BQB=0.779208;DP=3957;DP4=1793,1811,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000505433;MQB=9.67989e-08;MQSB=0.104168;RPB=0.511379;SGB=5.79046;VDB=0.919881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.8:20526737 chr08:020526737 0 W/20526737-20526737 FN1332-S Single Base Substitution A-G INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1332-S.SNP.8:20526738 chr08:020526738 0 W/20526738-20526738 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN838-S.SNP.8:20537445 chr08:020537445 0 W/20537445-20537445 FN838-S Single Base Substitution T-C INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2403.SNP.8:20541275 chr08:020541275 0 W/20541275-20541275 FN2403 SNP G -> A AC=1;AN=200;BQB=0.939954;DP=6882;DP4=1971,4366,8,7;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0491136;MQB=0.864049;MQSB=0;RPB=0.303294;SGB=63.4749;VDB=0.284054;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E353|907|LOC_Os08g33060|protein_coding|CODING|LOC_Os08g33060.1|3|1) FN3901-S.SNP.8:20555839 chr08:020555839 0 W/20555839-20555839 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.950014;DP=2443;DP4=1222,1140,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.68287e-07;MQSB=0.769199;RPB=0.00848074;SGB=30.704;VDB=0.00624239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S246F|492|LOC_Os08g33076|protein_coding|CODING|LOC_Os08g33076.1|6|1) FN-313.SNP.8:20557816 chr08:020557816 0 W/20557816-20557816 FN-313 Single Base Substitution A-G UTR_3_PRIME HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1212-S.SNP.8:20574369 chr08:020574369 0 W/20574369-20574369 FN1212-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1212-S.SNP.8:20574370 chr08:020574370 0 W/20574370-20574370 FN1212-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3763-S.SNP.8:20575934 chr08:020575934 0 W/20575934-20575934 FN3763-S SNP A -> T AC=2;AN=190;BQB=0.953049;DP=2789;DP4=1288,1429,8,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.21187e-10;MQSB=0.822782;RPB=0.879476;SGB=67.3108;VDB=0.803416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3763-S.SNP.8:20575935 chr08:020575935 0 W/20575935-20575935 FN3763-S SNP A -> T AC=2;AN=190;BQB=0.907418;DP=2789;DP4=1292,1397,7,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.25061e-10;MQSB=0.902489;RPB=0.586148;SGB=46.7622;VDB=0.689262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.8:20578678 chr08:020578678 0 W/20578678-20578678 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.998148;DP=2504;DP4=1224,1180,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.84109e-10;MQSB=0.975422;RPB=0.862143;SGB=53.8699;VDB=0.94637;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.8:20587724 chr08:020587724 0 W/20587724-20587724 FN985-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g33130 expressed protein SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2219-S.SNP.8:20592197 chr08:020592197 0 W/20592197-20592197 FN2219-S SNP T -> C AC=1;AN=190;BQB=0.924684;DP=4927;DP4=2545,2028,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34184e-11;MQSB=0.907685;RPB=0.951033;SGB=94.6341;VDB=0.282349;EFF=INTRON(MODIFIER||||344|LOC_Os08g33140|protein_coding|CODING|LOC_Os08g33140.1|1|1) FN-25.SNP.8:20593008 chr08:020593008 0 W/20593008-20593008 FN-25 Single Base Substitution T-C INTRON Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN-213.SNP.8:20595071 chr08:020595071 0 W/20595071-20595071 FN-213 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2709-S.SNP.8:20607539 chr08:020607539 0 W/20607539-20607539 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.976793;DP=5875;DP4=3042,2502,4,7;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000613815;MQSB=5.67166e-07;RPB=0.894077;SGB=45.0543;VDB=0.459646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.8:20608268 chr08:020608268 0 W/20608268-20608268 FN2487 SNP A -> C AC=1;AN=200;BQB=0.393779;DP=4988;DP4=2249,2444,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200481;MQB=2.62142e-11;MQSB=0.800568;RPB=0.503286;SGB=54.6902;VDB=0.102572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.8:20611017 chr08:020611017 0 W/20611017-20611017 FN2356 SNP G -> T AC=1;AN=192;BQB=0.636719;DP=5365;DP4=2807,2232,26,17;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=4.59907e-09;MQSB=0.0235842;RPB=0.53992;SGB=95.587;VDB=0.326568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.8:20613498 chr08:020613498 0 W/20613498-20613498 FN2460 SNP G -> T AC=1;AN=200;BQB=0.588822;DP=4495;DP4=1912,2285,7,7;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.000444939;MQB=9.00181e-07;MQSB=1.22939e-05;RPB=0.620601;SGB=58.8698;VDB=0.230481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.8:20625369 chr08:020625369 0 W/20625369-20625369 FN2216-S SNP G -> T AC=1;AN=190;BQB=0.857661;DP=4633;DP4=2024,2238,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.52581e-14;MQSB=0.992248;RPB=0.964606;SGB=44.0907;VDB=0.697089;EFF=UTR_3_PRIME(MODIFIER||191||432|LOC_Os08g33160|protein_coding|CODING|LOC_Os08g33160.1|7|1),UTR_3_PRIME(MODIFIER||191||427|LOC_Os08g33160|protein_coding|CODING|LOC_Os08g33160.2|7|1) FN2660-S.SNP.8:20626123 chr08:020626123 0 W/20626123-20626123 FN2660-S SNP T -> G AC=1;AN=200;BQB=0.621837;DP=4803;DP4=2306,2124,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28812e-10;MQSB=0.970931;RPB=0.443853;SGB=-37.2897;VDB=0.181496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Cct|T321P|432|LOC_Os08g33160|protein_coding|CODING|LOC_Os08g33160.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Cct|T316P|427|LOC_Os08g33160|protein_coding|CODING|LOC_Os08g33160.2|5|1) FN2322.SNP.8:20632635 chr08:020632635 0 W/20632635-20632635 FN2322 SNP C -> A AC=2;AN=192;BQB=0.35477;DP=5218;DP4=2392,2495,13,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.33932e-19;MQSB=0.935465;RPB=0.562002;SGB=64.8148;VDB=0.10501;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.8:20635205 chr08:020635205 0 W/20635205-20635205 FN1193-S Single Base Substitution C-G INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3599-S.SNP.8:20636061 chr08:020636061 0 W/20636061-20636061 FN3599-S SNP A -> G AC=1;AN=188;BQB=0.454487;DP=2741;DP4=1299,1388,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64906e-06;MQSB=0.875191;RPB=0.745271;SGB=62.6088;VDB=0.795712;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.8:20642112 chr08:020642112 0 W/20642112-20642112 FN-288 Single Base Substitution G-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2155-S.SNP.8:20643442 chr08:020643442 0 W/20643442-20643442 FN2155-S SNP G -> T AC=1;AN=168;BQB=0.0434204;DP=3901;DP4=1856,1987,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00410151;MQB=2.81583e-08;MQSB=0.881724;RPB=0.747771;SGB=-85.2162;VDB=0.524653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2155-S.SNP.8:20643443 chr08:020643443 0 W/20643443-20643443 FN2155-S SNP C -> T AC=1;AN=168;BQB=0.727225;DP=3915;DP4=1861,2009,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00408685;MQB=8.63522e-08;MQSB=0.895402;RPB=0.414954;SGB=-36.659;VDB=0.399873;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.8:20659940 chr08:020659940 0 W/20659940-20659940 FN571-S Single Base Substitution T-C INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2279-S.SNP.8:20660875 chr08:020660875 0 W/20660875-20660875 FN2279-S SNP G -> T AC=1;AN=190;BQB=0.968408;DP=4180;DP4=1786,2110,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.41764e-10;MQSB=0.980428;RPB=0.995456;SGB=76.4186;VDB=0.357527;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.8:20671425 chr08:020671425 0 W/20671425-20671425 FN501-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1623-S.SNP.8:20680551 chr08:020680551 0 W/20680551-20680551 FN1623-S Single Base Substitution C-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2724-S.SNP.8:20680692 chr08:020680692 0 W/20680692-20680692 FN2724-S SNP A -> T AC=2;AN=200;BQB=0.769582;DP=5466;DP4=2229,2937,17,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.45167e-24;MQSB=0.71486;RPB=0.958975;SGB=102.43;VDB=0.648546;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.8:20692824 chr08:020692824 0 W/20692824-20692824 FN711-S Single Base Substitution C-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN711-S.SNP.8:20692825 chr08:020692825 0 W/20692825-20692825 FN711-S Single Base Substitution C-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN4146-S.SNP.8:20693145 chr08:020693145 0 W/20693145-20693145 FN4146-S SNP T -> C AC=1;AN=170;BQB=0.976793;DP=2562;DP4=1355,1132,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23647e-08;MQSB=0.912528;RPB=0.483066;SGB=41.7633;VDB=0.0124563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.8:20693617 chr08:020693617 0 W/20693617-20693617 FN1453-S Single Base Substitution G-A INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2771-S.SNP.8:20694235 chr08:020694235 0 W/20694235-20694235 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.999745;DP=4248;DP4=2039,1951,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000706215;MQB=3.42063e-09;MQSB=0.521445;RPB=0.178859;SGB=65.3149;VDB=0.738699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.8:20694409 chr08:020694409 0 W/20694409-20694409 FN3768-S SNP G -> T AC=1;AN=190;BQB=0.999585;DP=2675;DP4=1316,1250,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.91063e-12;MQSB=0.528092;RPB=0.972247;SGB=68.0854;VDB=0.475062;EFF=INTERGENIC(MODIFIER||||||||||1) FN-412.SNP.8:20712468 chr08:020712468 0 W/20712468-20712468 FN-412 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g33220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN2739-S.SNP.8:20719717 chr08:020719717 0 W/20719717-20719717 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.973185;DP=5119;DP4=2455,2453,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20478e-08;MQSB=0.935184;RPB=0.709881;SGB=63.4749;VDB=0.784707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.8:20724917 chr08:020724917 0 W/20724917-20724917 FN1419-S Single Base Substitution G-A INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN712-S.SNP.8:20725407 chr08:020725407 0 W/20725407-20725407 FN712-S Single Base Substitution G-C INTERGENIC HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1313-S.SNP.8:20727425 chr08:020727425 0 W/20727425-20727425 FN1313-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2239-S.SNP.8:20732525 chr08:020732525 0 W/20732525-20732525 FN2239-S SNP C -> T AC=2;AN=190;BQB=0.89436;DP=4636;DP4=2125,1990,18,21;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00539258;MQB=2.44367e-08;MQSB=0.425403;RPB=0.980301;SGB=-176.339;VDB=0.660508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S342F|1136|LOC_Os08g33270|protein_coding|CODING|LOC_Os08g33270.1|11|1) FN3889-S.SNP.8:20736440 chr08:020736440 0 W/20736440-20736440 FN3889-S SNP C -> T AC=1;AN=158;BQB=0.926599;DP=1983;DP4=973,925,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.0010688;MQSB=0.0766646;RPB=0.906715;SGB=23.9652;VDB=0.874265;EFF=INTRON(MODIFIER||||911|LOC_Os08g33280|protein_coding|CODING|LOC_Os08g33280.1|15|1) W453-3-1.SNP.8:20745830 chr08:020745830 0 W/20745830-20745830 W453-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN670-S.SNP.8:20746412 chr08:020746412 0 W/20746412-20746412 FN670-S Single Base Substitution G-A INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN554-S.SNP.8:20756214 chr08:020756214 0 W/20756214-20756214 FN554-S Single Base Substitution A-G INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3857-S.SNP.8:20760292 chr08:020760292 0 W/20760292-20760292 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.980686;DP=2104;DP4=983,1036,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.78544e-07;MQSB=0.977469;RPB=0.72457;SGB=38.3284;VDB=0.529323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.8:20762603 chr08:020762603 0 W/20762603-20762603 FN2638-S SNP G -> A AC=2;AN=200;BQB=0.643008;DP=4797;DP4=2081,2356,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29678e-23;MQSB=0.871466;RPB=0.964026;SGB=51.2243;VDB=0.659166;EFF=INTRON(MODIFIER||||534|LOC_Os08g33300|protein_coding|CODING|LOC_Os08g33300.1|3|1) FN577-S.SNP.8:20764195 chr08:020764195 0 W/20764195-20764195 FN577-S Single Base Substitution T-A INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3791-S.SNP.8:20775497 chr08:020775497 0 W/20775497-20775497 FN3791-S SNP A -> T AC=2;AN=190;BQB=0.723247;DP=2494;DP4=1323,1081,9,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.2022e-11;MQSB=0.996037;RPB=0.821497;SGB=99.1879;VDB=0.598372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.8:20779964 chr08:020779964 0 W/20779964-20779964 FN3889-S SNP T -> A AC=1;AN=158;BQB=0.92202;DP=2430;DP4=1256,1090,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.63246e-07;MQSB=0.864969;RPB=0.352478;SGB=38.3284;VDB=0.307837;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K336*|1463|LOC_Os08g33320|protein_coding|CODING|LOC_Os08g33320.1|4|1);LOF=(LOC_Os08g33320|LOC_Os08g33320|1|1.00);NMD=(LOC_Os08g33320|LOC_Os08g33320|1|1.00) FN3798-S.SNP.8:20785807 chr08:020785807 0 W/20785807-20785807 FN3798-S SNP G -> T AC=1;AN=190;BQB=0.595312;DP=2743;DP4=1307,1371,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00015598;MQSB=0.986836;RPB=0.950818;SGB=39.9877;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.8:20787155 chr08:020787155 0 W/20787155-20787155 FN4179-S SNP C -> G AC=2;AN=170;BQB=0.31363;DP=2553;DP4=1087,1338,13,22;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.11695e-13;MQSB=0.987689;RPB=0.925476;SGB=31.7428;VDB=0.0596617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.8:20791448 chr08:020791448 0 W/20791448-20791448 FN1114-S Single Base Substitution G-A INTRON HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN4017-S.SNP.8:20800182 chr08:020800182 0 W/20800182-20800182 FN4017-S SNP A -> G AC=1;AN=168;BQB=0.986651;DP=2985;DP4=1297,1545,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.82418e-08;MQSB=0.999106;RPB=0.813167;SGB=31.3172;VDB=0.952421;EFF=INTRON(MODIFIER||||406|LOC_Os08g33340|protein_coding|CODING|LOC_Os08g33340.1|6|1),INTRON(MODIFIER||||405|LOC_Os08g33340|protein_coding|CODING|LOC_Os08g33340.2|6|1) FN3869-S.SNP.8:20809514 chr08:020809514 0 W/20809514-20809514 FN3869-S SNP T -> C AC=1;AN=158;BQB=0.872009;DP=2598;DP4=1219,1266,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.95502e-07;MQSB=0.995547;RPB=0.988941;SGB=37.4429;VDB=0.27967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I96T|280|LOC_Os08g33360|protein_coding|CODING|LOC_Os08g33360.1|3|1) FN3430-S.SNP.8:20810070 chr08:020810070 0 W/20810070-20810070 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.892011;DP=2783;DP4=1289,1379,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.76626e-08;MQSB=0.996293;RPB=0.800368;SGB=5.28054;VDB=0.0663;EFF=INTRON(MODIFIER||||280|LOC_Os08g33360|protein_coding|CODING|LOC_Os08g33360.1|3|1) FN464-S.SNP.8:20823515 chr08:020823515 0 W/20823515-20823515 FN464-S Single Base Substitution G-T INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN2246-S.SNP.8:20838311 chr08:020838311 0 W/20838311-20838311 FN2246-S SNP T -> C AC=1;AN=190;BQB=0.797102;DP=5296;DP4=2598,2273,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.44818e-12;MQSB=0.0944112;RPB=0.979621;SGB=112.85;VDB=0.636851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.8:20842287 chr08:020842287 0 W/20842287-20842287 FN2438 SNP C -> T AC=1;AN=200;BQB=0.28534;DP=4721;DP4=2000,2434,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.52528e-08;MQSB=0.958011;RPB=0.492095;SGB=14.3054;VDB=0.878147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A60T|87|LOC_Os08g33410|protein_coding|CODING|LOC_Os08g33410.1|3|1) FN2349.SNP.8:20842862 chr08:020842862 0 W/20842862-20842862 FN2349 SNP T -> A AC=2;AN=192;BQB=0.95067;DP=4612;DP4=2231,2080,31,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.13949e-30;MQSB=0.906443;RPB=0.0358265;SGB=62.107;VDB=0.155751;EFF=INTRON(MODIFIER||||87|LOC_Os08g33410|protein_coding|CODING|LOC_Os08g33410.1|1|1) FN2758-S.SNP.8:20860725 chr08:020860725 0 W/20860725-20860725 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.808849;DP=4829;DP4=2281,2283,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01575e-07;MQSB=0.991208;RPB=0.965538;SGB=36.6644;VDB=0.623379;EFF=SPLICE_SITE_REGION(LOW||||475|LOC_Os08g33440|protein_coding|CODING|LOC_Os08g33440.1|3|1),INTRON(MODIFIER||||475|LOC_Os08g33440|protein_coding|CODING|LOC_Os08g33440.1|3|1) FN2596-S.SNP.8:20868065 chr08:020868065 0 W/20868065-20868065 FN2596-S SNP C -> G AC=2;AN=198;BQB=0.763648;DP=4354;DP4=1934,2191,21,18;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.0107947;MQB=1.36659e-17;MQSB=0.434278;RPB=0.993574;SGB=86.437;VDB=0.699613;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||864|LOC_Os08g33450|protein_coding|CODING|LOC_Os08g33450.1|8|1),INTRON(MODIFIER||||864|LOC_Os08g33450|protein_coding|CODING|LOC_Os08g33450.1|7|1);LOF=(LOC_Os08g33450|LOC_Os08g33450|1|1.00) FN2338.SNP.8:20868398 chr08:020868398 0 W/20868398-20868398 FN2338 SNP G -> A AC=1;AN=192;BQB=0.0058476;DP=4671;DP4=1942,2478,5,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00899165;MQB=1.17534e-06;MQSB=0.0152996;RPB=0.979016;SGB=57.6018;VDB=0.423267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P502S|864|LOC_Os08g33450|protein_coding|CODING|LOC_Os08g33450.1|7|1) FN571-S.SNP.8:20878194 chr08:020878194 0 W/20878194-20878194 FN571-S Single Base Substitution A-T INTERGENIC HET SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN4117-S.SNP.8:20889076 chr08:020889076 0 W/20889076-20889076 FN4117-S SNP A -> G AC=1;AN=182;BQB=0.991812;DP=3133;DP4=1488,1562,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.78407e-07;MQSB=0.990851;RPB=0.97195;SGB=35.6277;VDB=0.640685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.8:20892264 chr08:020892264 0 W/20892264-20892264 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.308521;DP=5202;DP4=2561,2379,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10597e-07;MQSB=0.786262;RPB=0.962324;SGB=54.2646;VDB=0.824937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.8:20893446 chr08:020893446 0 W/20893446-20893446 FN1532-S Single Base Substitution A-G INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2130-S.SNP.8:20893871 chr08:020893871 0 W/20893871-20893871 FN2130-S SNP T -> C AC=1;AN=168;BQB=0.0453918;DP=3900;DP4=1803,2061,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4901e-06;MQSB=0.994582;RPB=0.666286;SGB=-38.9357;VDB=0.975815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.8:20894272 chr08:020894272 0 W/20894272-20894272 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.979183;DP=2888;DP4=1472,1353,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.78066e-07;MQSB=0.738065;RPB=0.999757;SGB=10.6662;VDB=0.961991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.8:20895247 chr08:020895247 0 W/20895247-20895247 FN2476 SNP C -> T AC=1;AN=200;BQB=0.999875;DP=4871;DP4=2273,2370,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205297;MQB=6.01703e-08;MQSB=0.873079;RPB=0.528201;SGB=77.2904;VDB=0.826731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.8:20901584 chr08:020901584 0 W/20901584-20901584 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.609234;DP=4853;DP4=2306,2262,19,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.24562e-20;MQSB=0.995764;RPB=0.362024;SGB=132.055;VDB=0.961352;EFF=INTRON(MODIFIER||||159|LOC_Os08g33488|protein_coding|CODING|LOC_Os08g33488.1|2|1) FN920-S.SNP.8:20914925 chr08:020914925 0 W/20914925-20914925 FN920-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g33510 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN543-S.SNP.8:20920353 chr08:020920353 0 W/20920353-20920353 FN543-S Single Base Substitution T-C INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1496-S.SNP.8:20920669 chr08:020920669 0 W/20920669-20920669 FN1496-S Single Base Substitution A-C INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN776-S.SNP.8:20921625 chr08:020921625 0 W/20921625-20921625 FN776-S Single Base Substitution A-C INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN808-S.SNP.8:20923209 chr08:020923209 0 W/20923209-20923209 FN808-S Single Base Substitution T-C INTERGENIC HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN1048-S.SNP.8:20923220 chr08:020923220 0 W/20923220-20923220 FN1048-S Single Base Substitution G-A INTERGENIC HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3985-S.SNP.8:20933856 chr08:020933856 0 W/20933856-20933856 FN3985-S SNP G -> T AC=1;AN=168;BQB=0.710569;DP=2302;DP4=1012,1156,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.16862e-07;MQSB=0.878203;RPB=0.999962;SGB=48.4712;VDB=0.999271;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.8:20935901 chr08:020935901 0 W/20935901-20935901 FN1314-S Single Base Substitution T-C INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN626-S.SNP.8:20938798 chr08:020938798 0 W/20938798-20938798 FN626-S Single Base Substitution G-T INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2096-S.SNP.8:20951799 chr08:020951799 0 W/20951799-20951799 FN2096-S SNP G -> A AC=1;AN=168;BQB=0.755251;DP=2355;DP4=1225,1073,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0424628;MQB=0.515888;MQSB=0;RPB=0.858769;SGB=-15.3725;VDB=0.700605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.8:20954182 chr08:020954182 0 W/20954182-20954182 FN2304 SNP C -> T AC=1;AN=192;BQB=0.146617;DP=4513;DP4=2020,2065,7,15;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00509639;MQB=0.0814983;MQSB=8.50475e-14;RPB=0.354008;SGB=94.8539;VDB=0.85753;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S318|1058|LOC_Os08g33560|protein_coding|CODING|LOC_Os08g33560.1|2|1) FN4020-S.SNP.8:20961470 chr08:020961470 0 W/20961470-20961470 FN4020-S SNP T -> A AC=1;AN=168;BQB=0.927077;DP=2962;DP4=1298,1367,17,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.05784e-12;MQSB=0.991683;RPB=0.790874;SGB=-9.34108;VDB=0.640479;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P602|1898|LOC_Os08g33570|protein_coding|CODING|LOC_Os08g33570.1|1|1) FN3507-S.SNP.8:20963616 chr08:020963616 0 W/20963616-20963616 FN3507-S SNP C -> T AC=2;AN=188;BQB=0.676578;DP=4027;DP4=1590,2346,13,28;HOB=0.0210502;ICB=0.494738;MQ=29;MQ0F=0.206357;MQB=0.205892;MQSB=0;RPB=0.21357;SGB=180.734;VDB=0.935213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.8:20964396 chr08:020964396 0 W/20964396-20964396 FN3819-S SNP A -> G AC=1;AN=190;BQB=0.819485;DP=2345;DP4=1216,953,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0358209;MQB=0.0503885;MQSB=0.000368498;RPB=0.994841;SGB=35.4339;VDB=0.77555;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.8:20979695 chr08:020979695 0 W/20979695-20979695 FN4043-S SNP C -> T AC=2;AN=168;BQB=0.976692;DP=2532;DP4=1363,1025,19,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.20342e-14;MQSB=0.826249;RPB=0.933031;SGB=114.204;VDB=0.809839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.8:20982599 chr08:020982599 0 W/20982599-20982599 FN3370-S SNP C -> T AC=1;AN=184;BQB=0.977347;DP=3607;DP4=1864,1661,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.8451e-08;MQSB=0.937304;RPB=0.593565;SGB=48.7425;VDB=0.974316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1093-S.SNP.8:20986180 chr08:020986180 0 W/20986180-20986180 FN1093-S Single Base Substitution C-A INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1554-37-38.SNP.8:20986452 chr08:020986452 0 W/20986452-20986452 FN1554-37-38 SNP G -> C AC=1;AN=190;BQB=0.930314;DP=4760;DP4=2104,2416,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.79115e-09;MQSB=0.904577;RPB=0.671925;SGB=26.2136;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.8:20990634 chr08:020990634 0 W/20990634-20990634 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.845695;DP=2897;DP4=1401,1382,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00111177;MQSB=0.700516;RPB=0.879036;SGB=32.5467;VDB=0.778166;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.8:20994479 chr08:020994479 0 W/20994479-20994479 FN545-S Single Base Substitution T-A INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN2215-S.SNP.8:20997323 chr08:020997323 0 W/20997323-20997323 FN2215-S SNP T -> G AC=1;AN=190;BQB=0.697497;DP=3393;DP4=1553,1448,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.3657e-09;MQSB=0.831008;RPB=0.930179;SGB=57.4238;VDB=0.755361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L16R|153|LOC_Os08g33620|protein_coding|CODING|LOC_Os08g33620.1|1|1) FN460-S.SNP.8:20998817 chr08:020998817 0 W/20998817-20998817 FN460-S Single Base Substitution C-A INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3280-S.SNP.8:21010372 chr08:021010372 0 W/21010372-21010372 FN3280-S SNP G -> T AC=1;AN=184;BQB=0.903301;DP=2993;DP4=1573,1272,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66852e-08;MQSB=0.981681;RPB=0.998884;SGB=71.3514;VDB=0.532381;EFF=INTERGENIC(MODIFIER||||||||||1) FN-35.SNP.8:21010455 chr08:021010455 0 W/21010455-21010455 FN-35 Single Base Substitution A-C INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1529-S.SNP.8:21010455 chr08:021010455 0 W/21010455-21010455 FN1529-S Single Base Substitution A-C INTERGENIC Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3568-S.SNP.8:21010455 chr08:021010455 0 W/21010455-21010455 FN3568-S SNP A -> C AC=1;AN=188;BQB=0.570872;DP=3278;DP4=1828,1183,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.65129e-09;MQSB=0.897471;RPB=0.946437;SGB=-37.8212;VDB=0.0330783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.8:21011381 chr08:021011381 0 W/21011381-21011381 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.999119;DP=3351;DP4=1499,1710,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.01684e-07;MQSB=0.984881;RPB=0.796851;SGB=48.7425;VDB=0.207866;EFF=INTRON(MODIFIER||||250|LOC_Os08g33640|protein_coding|CODING|LOC_Os08g33640.2|1|1),INTRON(MODIFIER||||250|LOC_Os08g33640|protein_coding|CODING|LOC_Os08g33640.1|1|1) FN4123-S.SNP.8:21017490 chr08:021017490 0 W/21017490-21017490 FN4123-S SNP A -> T AC=1;AN=182;BQB=0.462744;DP=2702;DP4=1304,1330,10,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.04164e-05;MQSB=0.987103;RPB=0.226804;SGB=48.6223;VDB=0.966911;EFF=INTRON(MODIFIER||||381|LOC_Os08g33650|protein_coding|CODING|LOC_Os08g33650.2|1|1) FN2126-S.SNP.8:21019662 chr08:021019662 0 W/21019662-21019662 FN2126-S SNP G -> A AC=1;AN=168;BQB=0.130412;DP=3848;DP4=1724,2079,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.76452e-08;MQSB=0.904128;RPB=0.97774;SGB=-103.201;VDB=0.919607;EFF=UTR_3_PRIME(MODIFIER||100||357|LOC_Os08g33660|protein_coding|CODING|LOC_Os08g33660.1|3|1) FN436-S.SNP.8:21021354 chr08:021021354 0 W/21021354-21021354 FN436-S Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN4304-S.SNP.8:21029461 chr08:021029461 0 W/21029461-21029461 FN4304-S SNP C -> T AC=2;AN=170;BQB=0.999246;DP=2564;DP4=1444,1044,13,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.05169e-16;MQSB=0.897261;RPB=0.105875;SGB=79.6325;VDB=0.0373902;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.8:21029939 chr08:021029939 0 W/21029939-21029939 FN427-S Single Base Substitution T-C INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2486.SNP.8:21031143 chr08:021031143 0 W/21031143-21031143 FN2486 SNP C -> T AC=1;AN=200;BQB=0.268055;DP=4911;DP4=2099,2540,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.81807e-12;MQSB=0.858925;RPB=0.974372;SGB=81.8956;VDB=0.425153;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.8:21032258 chr08:021032258 0 W/21032258-21032258 FN267-S Single Base Substitution T-A INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN-170.SNP.8:21037451 chr08:021037451 0 W/21037451-21037451 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3666-S.SNP.8:21047049 chr08:021047049 0 W/21047049-21047049 FN3666-S SNP C -> G AC=1;AN=190;BQB=0.942504;DP=2847;DP4=1386,1365,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.63906e-11;MQSB=0.864803;RPB=0.79166;SGB=50.3161;VDB=0.345221;EFF=UTR_3_PRIME(MODIFIER||2241||601|LOC_Os08g33700|protein_coding|CODING|LOC_Os08g33700.1|3|1) FN-168.SNP.8:21053572 chr08:021053572 0 W/21053572-21053572 FN-168 Single Base Substitution A-G INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2473.SNP.8:21058129 chr08:021058129 0 W/21058129-21058129 FN2473 SNP G -> C AC=1;AN=200;BQB=0.99722;DP=5496;DP4=2297,2885,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36857e-07;MQSB=0.610544;RPB=0.198432;SGB=54.2646;VDB=0.178077;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.8:21060892 chr08:021060892 0 W/21060892-21060892 FN4077-S SNP A -> C AC=2;AN=182;BQB=0.798251;DP=2870;DP4=1457,1292,10,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000348432;MQB=1.15432e-10;MQSB=0.360637;RPB=0.907739;SGB=53.182;VDB=0.36692;EFF=INTERGENIC(MODIFIER||||||||||1) FN540-S.SNP.8:21061456 chr08:021061456 0 W/21061456-21061456 FN540-S Single Base Substitution G-A INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN-293.SNP.8:21065675 chr08:021065675 0 W/21065675-21065675 FN-293 Single Base Substitution T-G INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN3675-S.SNP.8:21069710 chr08:021069710 0 W/21069710-21069710 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.778784;DP=2397;DP4=1115,1183,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.02569e-05;MQSB=0.00233033;RPB=0.708429;SGB=53.6492;VDB=0.868225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.8:21073419 chr08:021073419 0 W/21073419-21073419 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.80398;DP=2059;DP4=806,1157,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000485673;MQB=2.64572e-05;MQSB=8.84754e-09;RPB=0.858363;SGB=15.7097;VDB=0.0869849;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.8:21077033 chr08:021077033 0 W/21077033-21077033 FN1122-S Single Base Substitution A-G INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2600-S.SNP.8:21081133 chr08:021081133 0 W/21081133-21081133 FN2600-S SNP C -> A AC=1;AN=198;BQB=0.998266;DP=4345;DP4=2269,1796,17,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.7629e-12;MQSB=0.989191;RPB=0.520572;SGB=100.095;VDB=0.980166;EFF=INTRON(MODIFIER||||594|LOC_Os08g33740|protein_coding|CODING|LOC_Os08g33740.1|2|1) FN2563-S.SNP.8:21098486 chr08:021098486 0 W/21098486-21098486 FN2563-S SNP G -> T AC=1;AN=198;BQB=0.992515;DP=4158;DP4=2025,1875,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.05474e-05;MQSB=0.442716;RPB=0.556749;SGB=26.5745;VDB=0.366715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.8:21102265 chr08:021102265 0 W/21102265-21102265 FN1240-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN796-S.SNP.8:21109574 chr08:021109574 0 W/21109574-21109574 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2121-S.SNP.8:21113256 chr08:021113256 0 W/21113256-21113256 FN2121-S SNP G -> C AC=1;AN=168;BQB=0.990233;DP=4511;DP4=2253,2195,26,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.88191e-16;MQSB=0.987594;RPB=0.992132;SGB=-336.576;VDB=0.653755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.8:21119906 chr08:021119906 0 W/21119906-21119906 FN3543-S SNP G -> C AC=2;AN=188;BQB=0.936317;DP=2970;DP4=1441,1458,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.0016835;MQB=6.73552e-12;MQSB=0.688909;RPB=0.693048;SGB=89.8686;VDB=0.29628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E765Q|1033|LOC_Os08g33760|protein_coding|CODING|LOC_Os08g33760.1|6|1) FN2471.SNP.8:21121917 chr08:021121917 0 W/21121917-21121917 FN2471 SNP C -> T AC=1;AN=200;BQB=0.349608;DP=4327;DP4=1900,2143,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000231107;MQB=2.92384e-10;MQSB=0.00756468;RPB=0.694087;SGB=109.527;VDB=0.774423;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V50I|173|LOC_Os08g33770|protein_coding|CODING|LOC_Os08g33770.1|2|1) W247-2-1.SNP.8:21127616 chr08:021127616 0 W/21127616-21127616 W247-2-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g33780 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN2121-S.SNP.8:21127963 chr08:021127963 0 W/21127963-21127963 FN2121-S SNP A -> T AC=1;AN=168;BQB=0.723458;DP=2780;DP4=1434,1307,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00179856;MQB=5.88623e-08;MQSB=0.923951;RPB=0.836115;SGB=7.05233;VDB=0.249373;EFF=INTRON(MODIFIER||||627|LOC_Os08g33780|protein_coding|CODING|LOC_Os08g33780.1|3|1) FN3319-S.SNP.8:21128012 chr08:021128012 0 W/21128012-21128012 FN3319-S SNP C -> T AC=2;AN=184;BQB=0.9967;DP=3772;DP4=1878,1775,16,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.10328e-16;MQSB=0.959906;RPB=0.95473;SGB=134.656;VDB=0.24504;EFF=INTRON(MODIFIER||||627|LOC_Os08g33780|protein_coding|CODING|LOC_Os08g33780.1|3|1) FN4030-S.SNP.8:21128698 chr08:021128698 0 W/21128698-21128698 FN4030-S SNP C -> T AC=1;AN=168;BQB=0.989708;DP=3541;DP4=1921,1505,24,1;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0158147;MQB=1.78821e-11;MQSB=0.920685;RPB=0.856097;SGB=-12.3568;VDB=0.400844;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H262|627|LOC_Os08g33780|protein_coding|CODING|LOC_Os08g33780.1|4|1) FN3369-S.SNP.8:21129065 chr08:021129065 0 W/21129065-21129065 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.921692;DP=3755;DP4=1599,2034,7,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000798935;MQB=4.81306e-10;MQSB=0.129528;RPB=0.612058;SGB=103.004;VDB=0.825781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R385C|627|LOC_Os08g33780|protein_coding|CODING|LOC_Os08g33780.1|4|1) FN-200.SNP.8:21133735 chr08:021133735 0 W/21133735-21133735 FN-200 Single Base Substitution G-A INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN962-S.SNP.8:21134301 chr08:021134301 0 W/21134301-21134301 FN962-S Single Base Substitution G-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1203-S.SNP.8:21138081 chr08:021138081 0 W/21138081-21138081 FN1203-S Single Base Substitution G-T INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN4188-S.SNP.8:21146435 chr08:021146435 0 W/21146435-21146435 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.958701;DP=2341;DP4=1171,1072,7,14;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0247757;MQB=0.990863;MQSB=3.96537e-11;RPB=0.970115;SGB=87.856;VDB=0.07958;EFF=INTERGENIC(MODIFIER||||||||||1) W481-5-1.SNP.8:21152580 chr08:021152580 0 W/21152580-21152580 W481-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2765-S.SNP.8:21153905 chr08:021153905 0 W/21153905-21153905 FN2765-S SNP T -> A AC=1;AN=198;BQB=0.331551;DP=4136;DP4=1852,2030,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.21639e-11;MQSB=0.984559;RPB=0.996125;SGB=54.5295;VDB=0.831276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.8:21158695 chr08:021158695 0 W/21158695-21158695 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.834036;DP=3052;DP4=1899,1064,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.72795e-05;MQSB=0.620975;RPB=0.994808;SGB=32.2261;VDB=0.535431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.8:21167471 chr08:021167471 0 W/21167471-21167471 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.999824;DP=2699;DP4=1304,1305,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.40635e-09;MQSB=0.980012;RPB=0.215989;SGB=60.4004;VDB=0.0526788;EFF=INTRON(MODIFIER||||270|LOC_Os08g33810|protein_coding|CODING|LOC_Os08g33810.1|3|1) FN498-S.SNP.8:21172440 chr08:021172440 0 W/21172440-21172440 FN498-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g33820 chlorophyll A-B binding protein, putative, expressed SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2291.SNP.8:21176741 chr08:021176741 0 W/21176741-21176741 FN2291 SNP A -> C AC=1;AN=192;BQB=0.6984;DP=5298;DP4=2581,2403,28,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.82603e-25;MQSB=0.905039;RPB=0.996992;SGB=-48.3974;VDB=0.637857;EFF=INTRON(MODIFIER||||461|LOC_Os08g33830|protein_coding|CODING|LOC_Os08g33830.1|2|1),INTRON(MODIFIER||||361|LOC_Os08g33830|protein_coding|CODING|LOC_Os08g33830.2|2|1) FN-233.SNP.8:21178789 chr08:021178789 0 W/21178789-21178789 FN-233 Single Base Substitution C-T INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1170-S.SNP.8:21189081 chr08:021189081 0 W/21189081-21189081 FN1170-S Single Base Substitution G-A INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN498-S.SNP.8:21189433 chr08:021189433 0 W/21189433-21189433 FN498-S Single Base Substitution A-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN3431-S.SNP.8:21192559 chr08:021192559 0 W/21192559-21192559 FN3431-S SNP T -> C AC=1;AN=184;BQB=0.895219;DP=2558;DP4=1276,1210,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.64904e-05;MQSB=0.735851;RPB=0.997971;SGB=35.1773;VDB=0.859907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M364T|542|LOC_Os08g33850|protein_coding|CODING|LOC_Os08g33850.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M364T|537|LOC_Os08g33850|protein_coding|CODING|LOC_Os08g33850.2|6|1) FN2652-S.SNP.8:21195051 chr08:021195051 0 W/21195051-21195051 FN2652-S SNP G -> A AC=2;AN=200;BQB=0.419752;DP=4818;DP4=2352,2139,30,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.51339e-32;MQSB=0.99385;RPB=0.203395;SGB=170.056;VDB=0.286351;EFF=INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.1|1|1),INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.2|1|1) FN2652-S.SNP.8:21195053 chr08:021195053 0 W/21195053-21195053 FN2652-S SNP G -> A AC=2;AN=200;BQB=0.968529;DP=4792;DP4=2268,2124,32,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.70351e-33;MQSB=0.998939;RPB=0.470531;SGB=177.266;VDB=0.287601;EFF=INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.1|1|1),INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.2|1|1) FN2438.SNP.8:21196286 chr08:021196286 0 W/21196286-21196286 FN2438 SNP C -> T AC=2;AN=200;BQB=0.800629;DP=4900;DP4=2217,2469,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.2777e-27;MQSB=0.983333;RPB=0.605589;SGB=110.245;VDB=0.870686;EFF=INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.1|1|1),INTRON(MODIFIER||||276|LOC_Os08g33860|protein_coding|CODING|LOC_Os08g33860.2|1|1) FN3426-S.SNP.8:21203175 chr08:021203175 0 W/21203175-21203175 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.726029;DP=2833;DP4=1386,1381,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0137663;MQB=0.000786815;MQSB=0.0895475;RPB=0.889064;SGB=28.7043;VDB=0.384474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R349H|827|LOC_Os08g33870|protein_coding|CODING|LOC_Os08g33870.1|3|1) FN3711-S.SNP.8:21203872 chr08:021203872 0 W/21203872-21203872 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.894578;DP=2853;DP4=1400,1333,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00736067;MQB=3.80939e-08;MQSB=0.987448;RPB=0.762048;SGB=71.8647;VDB=0.474005;EFF=SPLICE_SITE_REGION(LOW||||827|LOC_Os08g33870|protein_coding|CODING|LOC_Os08g33870.1|2|1),INTRON(MODIFIER||||827|LOC_Os08g33870|protein_coding|CODING|LOC_Os08g33870.1|2|1) FN2754-S.SNP.8:21207558 chr08:021207558 0 W/21207558-21207558 FN2754-S SNP C -> A AC=1;AN=200;BQB=0.232134;DP=5239;DP4=2312,2611,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94458e-10;MQSB=0.9439;RPB=0.0635936;SGB=54.6902;VDB=0.568203;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.8:21207571 chr08:021207571 0 W/21207571-21207571 FN1409-S Single Base Substitution C-T INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2658-S.SNP.8:21219681 chr08:021219681 0 W/21219681-21219681 FN2658-S SNP A -> T AC=1;AN=200;BQB=0.930667;DP=4954;DP4=2415,2295,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94171e-18;MQSB=0.962854;RPB=0.980941;SGB=94.3471;VDB=0.231895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q299L|385|LOC_Os08g33910|protein_coding|CODING|LOC_Os08g33910.1|3|1) FN3568-S.SNP.8:21228197 chr08:021228197 0 W/21228197-21228197 FN3568-S SNP T -> C AC=1;AN=188;BQB=0.590687;DP=2401;DP4=1322,952,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57544e-07;MQSB=0.887348;RPB=0.908377;SGB=43.0708;VDB=0.857696;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.8:21237975 chr08:021237975 0 W/21237975-21237975 FN757-S Single Base Substitution G-A INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN355-S.SNP.8:21238215 chr08:021238215 0 W/21238215-21238215 FN355-S Single Base Substitution C-T INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3943-S.SNP.8:21239301 chr08:021239301 0 W/21239301-21239301 FN3943-S SNP A -> T AC=1;AN=168;BQB=0.585188;DP=2240;DP4=762,1049,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.1083e-07;MQSB=0.886514;RPB=0.950119;SGB=-155.491;VDB=0.92551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.8:21252967 chr08:021252967 0 W/21252967-21252967 FN3597-S SNP T -> G AC=2;AN=188;BQB=0.999771;DP=2833;DP4=1572,1165,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.56571e-10;MQSB=0.922249;RPB=0.774207;SGB=53.7007;VDB=0.155125;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.8:21253536 chr08:021253536 0 W/21253536-21253536 FN351-S Single Base Substitution C-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2333.SNP.8:21255507 chr08:021255507 0 W/21255507-21255507 FN2333 SNP T -> G AC=1;AN=192;BQB=0.170768;DP=4681;DP4=2231,2147,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00769066;MQB=0.149948;MQSB=0.999905;RPB=0.996351;SGB=8.91915;VDB=0.593371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.8:21257212 chr08:021257212 0 W/21257212-21257212 FN2618-S SNP G -> T AC=1;AN=198;BQB=0.607186;DP=4073;DP4=1795,2087,11,5;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.123496;MQB=0.271867;MQSB=0;RPB=0.953685;SGB=47.3393;VDB=0.765708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P815H|1005|LOC_Os08g33950|protein_coding|CODING|LOC_Os08g33950.1|5|1) FN2618-S.SNP.8:21257213 chr08:021257213 0 W/21257213-21257213 FN2618-S SNP G -> T AC=1;AN=198;BQB=0.805786;DP=4070;DP4=1786,2066,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.123096;MQB=0.0471329;MQSB=0;RPB=0.999729;SGB=-37.8551;VDB=0.425266;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P815T|1005|LOC_Os08g33950|protein_coding|CODING|LOC_Os08g33950.1|5|1) FN2652-S.SNP.8:21257219 chr08:021257219 0 W/21257219-21257219 FN2652-S SNP T -> A AC=2;AN=200;BQB=0.999812;DP=4349;DP4=1914,2250,28,20;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0.122097;MQB=0.89385;MQSB=3.09982e-38;RPB=0.692935;SGB=57.645;VDB=0.0581238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N813Y|1005|LOC_Os08g33950|protein_coding|CODING|LOC_Os08g33950.1|5|1) FN-102.SNP.8:21257603 chr08:021257603 0 W/21257603-21257603 FN-102 Single Base Substitution C-A STOP_GAINED HET LOC_Os08g33950 retrotransposon protein, putative, unclassified, expressed SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN3790-S.SNP.8:21260309 chr08:021260309 0 W/21260309-21260309 FN3790-S SNP T -> C AC=2;AN=190;BQB=0.599407;DP=2245;DP4=1030,1136,11,14;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.171938;MQB=0.90835;MQSB=1.06561e-24;RPB=0.637468;SGB=78.7471;VDB=0.144747;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G226|1005|LOC_Os08g33950|protein_coding|CODING|LOC_Os08g33950.1|3|1) FN-274.SNP.8:21262826 chr08:021262826 0 W/21262826-21262826 FN-274 Single Base Substitution T-C INTERGENIC HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3979-S.SNP.8:21263705 chr08:021263705 0 W/21263705-21263705 FN3979-S SNP C -> A AC=2;AN=168;BQB=0.78384;DP=1252;DP4=48,1118,0,16;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00319489;MQB=1.05471e-05;MQSB=1.16733e-09;RPB=0.0313689;SGB=24.6155;VDB=0.334298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.8:21265259 chr08:021265259 0 W/21265259-21265259 FN2678-S SNP G -> C AC=2;AN=200;BQB=0.717968;DP=4231;DP4=2076,1864,21,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.94186e-14;MQSB=0.242493;RPB=0.529058;SGB=115.978;VDB=0.178091;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G59A|125|LOC_Os08g33960|protein_coding|CODING|LOC_Os08g33960.1|1|1) FN-234.SNP.8:21269762 chr08:021269762 0 W/21269762-21269762 FN-234 Single Base Substitution A-G INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2230-S.SNP.8:21271294 chr08:021271294 0 W/21271294-21271294 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.998811;DP=4942;DP4=2112,2452,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202347;MQB=5.49858e-13;MQSB=0.0423672;RPB=0.707889;SGB=-40.3396;VDB=0.0383623;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.8:21271781 chr08:021271781 0 W/21271781-21271781 FN1763-S SNP G -> C AC=1;AN=188;BQB=0.134259;DP=3926;DP4=1776,2113,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.01259e-08;MQSB=0.987199;RPB=0.668919;SGB=-37.3645;VDB=0.938229;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.8:21272546 chr08:021272546 0 W/21272546-21272546 FN-137 Single Base Substitution T-C INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3637-S.SNP.8:21272949 chr08:021272949 0 W/21272949-21272949 FN3637-S SNP G -> A AC=1;AN=190;BQB=0.860492;DP=2825;DP4=1443,1271,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26692e-07;MQSB=0.974162;RPB=0.563149;SGB=18.552;VDB=0.294263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.8:21284557 chr08:021284557 0 W/21284557-21284557 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.318141;DP=3557;DP4=1973,1407,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.76324e-08;MQSB=0.868774;RPB=0.958335;SGB=61.7198;VDB=0.630397;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.8:21286093 chr08:021286093 0 W/21286093-21286093 FN999-S Single Base Substitution T-A INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3522-S.SNP.8:21293958 chr08:021293958 0 W/21293958-21293958 FN3522-S SNP C -> A AC=1;AN=188;BQB=0.987131;DP=2933;DP4=1586,1278,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.12158e-08;MQSB=0.568277;RPB=0.960874;SGB=48.979;VDB=0.757612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.8:21294800 chr08:021294800 0 W/21294800-21294800 FN3830-S SNP T -> A AC=1;AN=190;BQB=0.999992;DP=2950;DP4=1513,1336,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00440678;MQB=1.23104e-06;MQSB=0.0892377;RPB=0.292809;SGB=50.3161;VDB=0.217855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.8:21306384 chr08:021306384 0 W/21306384-21306384 FN-387 Single Base Substitution G-T INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN915-S.SNP.8:21307670 chr08:021307670 0 W/21307670-21307670 FN915-S Single Base Substitution G-T INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3446-S.SNP.8:21309784 chr08:021309784 0 W/21309784-21309784 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.979237;DP=2670;DP4=1246,1325,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.7962e-08;MQSB=0.995533;RPB=0.949355;SGB=48.7425;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.8:21310522 chr08:021310522 0 W/21310522-21310522 FN1034-S Single Base Substitution G-T INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN319-S.SNP.8:21310522 chr08:021310522 0 W/21310522-21310522 FN319-S Single Base Substitution G-T INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3373-S.SNP.8:21312823 chr08:021312823 0 W/21312823-21312823 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.895897;DP=3020;DP4=1563,1332,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.02613e-08;MQSB=0.475994;RPB=0.931;SGB=57.786;VDB=0.729579;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.8:21316206 chr08:021316206 0 W/21316206-21316206 FN-8 Single Base Substitution C-T STOP_GAINED Homo LOC_Os08g34020 exostosin family domain containing protein, expressed SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN2175-S.SNP.8:21317561 chr08:021317561 0 W/21317561-21317561 FN2175-S SNP T -> A AC=2;AN=168;BQB=0.00104785;DP=3734;DP4=2067,1599,18,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.33223e-13;MQSB=0.694733;RPB=0.597443;SGB=-136.6;VDB=0.853144;EFF=UTR_3_PRIME(MODIFIER||103||566|LOC_Os08g34020|protein_coding|CODING|LOC_Os08g34020.1|3|1),UTR_3_PRIME(MODIFIER||103||514|LOC_Os08g34020|protein_coding|CODING|LOC_Os08g34020.2|3|1) FN4109-S.SNP.8:21320859 chr08:021320859 0 W/21320859-21320859 FN4109-S SNP C -> A AC=1;AN=182;BQB=0.90781;DP=2571;DP4=1274,1194,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.58383e-08;MQSB=0.0371003;RPB=0.998561;SGB=57.644;VDB=0.814914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.8:21323322 chr08:021323322 0 W/21323322-21323322 FN2392 SNP C -> T AC=1;AN=200;BQB=0.728414;DP=3938;DP4=1847,1898,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51515e-11;MQSB=0.388832;RPB=0.704707;SGB=58.2954;VDB=0.197533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.8:21331080 chr08:021331080 0 W/21331080-21331080 FN3380-S SNP T -> A AC=1;AN=184;BQB=0.899597;DP=3152;DP4=1450,1591,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25575e-07;MQSB=0.904277;RPB=0.866933;SGB=44.2207;VDB=0.0319263;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.8:21331647 chr08:021331647 0 W/21331647-21331647 W247-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN493-S.SNP.8:21336687 chr08:021336687 0 W/21336687-21336687 FN493-S Single Base Substitution C-T INTERGENIC HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1229-S.SNP.8:21337303 chr08:021337303 0 W/21337303-21337303 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3369-S.SNP.8:21340132 chr08:021340132 0 W/21340132-21340132 FN3369-S SNP G -> A AC=1;AN=184;BQB=0.979515;DP=3032;DP4=1310,1592,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.47702e-12;MQSB=0.985328;RPB=0.805639;SGB=56.8786;VDB=0.207039;EFF=INTRON(MODIFIER||||763|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.1|4|1),INTRON(MODIFIER||||763|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.2|4|1),INTRON(MODIFIER||||755|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.3|4|1),INTRON(MODIFIER||||652|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.4|3|1) FN782-S.SNP.8:21349572 chr08:021349572 0 W/21349572-21349572 FN782-S Single Base Substitution T-A INTRON HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN3632-S.SNP.8:21351702 chr08:021351702 0 W/21351702-21351702 FN3632-S SNP A -> T AC=1;AN=190;BQB=0.941619;DP=3050;DP4=1590,1256,17,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60972e-13;MQSB=0.983639;RPB=0.96056;SGB=85.8548;VDB=0.84072;EFF=INTRON(MODIFIER||||763|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.1|21|1),INTRON(MODIFIER||||763|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.2|21|1),INTRON(MODIFIER||||755|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.3|21|1),INTRON(MODIFIER||||652|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.4|20|1) FN1356-S.SNP.8:21353329 chr08:021353329 0 W/21353329-21353329 FN1356-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2151-S.SNP.8:21353429 chr08:021353429 0 W/21353429-21353429 FN2151-S SNP C -> T AC=1;AN=168;BQB=1.37626e-06;DP=3834;DP4=1529,2243,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.39458e-10;MQSB=0.973313;RPB=0.363344;SGB=-315.878;VDB=0.325553;EFF=INTRON(MODIFIER||||763|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.1|22|1),INTRON(MODIFIER||||755|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.3|22|1),INTRON(MODIFIER||||652|LOC_Os08g34060|protein_coding|CODING|LOC_Os08g34060.4|21|1) FN3396-S.SNP.8:21354612 chr08:021354612 0 W/21354612-21354612 FN3396-S SNP T -> A AC=2;AN=184;BQB=0.461649;DP=2947;DP4=1527,1333,24,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.66239e-18;MQSB=0.992128;RPB=0.952015;SGB=134.358;VDB=0.0379424;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.8:21360769 chr08:021360769 0 W/21360769-21360769 FN1266-S Single Base Substitution A-T INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN1057-S.SNP.8:21365781 chr08:021365781 0 W/21365781-21365781 FN1057-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2668-S.SNP.8:21369106 chr08:021369106 0 W/21369106-21369106 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.786035;DP=4474;DP4=2203,2077,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.07357e-09;MQSB=0.898529;RPB=0.59226;SGB=58.8698;VDB=0.303442;EFF=INTRON(MODIFIER||||1348|LOC_Os08g34090|protein_coding|CODING|LOC_Os08g34090.1|5|1) FN2628-S.SNP.8:21369574 chr08:021369574 0 W/21369574-21369574 FN2628-S SNP G -> A AC=1;AN=200;BQB=0.990977;DP=4396;DP4=2154,1963,5,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=5.60256e-05;MQSB=0.773668;RPB=0.895304;SGB=29.4541;VDB=0.921324;EFF=INTRON(MODIFIER||||1348|LOC_Os08g34090|protein_coding|CODING|LOC_Os08g34090.1|5|1) FN995-S.SNP.8:21369684 chr08:021369684 0 W/21369684-21369684 FN995-S Single Base Substitution C-T INTRON HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN-97.SNP.8:21369790 chr08:021369790 0 W/21369790-21369790 FN-97 Single Base Substitution C-G INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3821-S.SNP.8:21371362 chr08:021371362 0 W/21371362-21371362 FN3821-S SNP A -> G AC=1;AN=190;BQB=0.982566;DP=3302;DP4=1610,1580,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000605693;MQB=1.74204e-10;MQSB=0.866255;RPB=0.999181;SGB=68.0854;VDB=0.587359;EFF=INTRON(MODIFIER||||1348|LOC_Os08g34090|protein_coding|CODING|LOC_Os08g34090.1|3|1) FN4201-S.SNP.8:21376114 chr08:021376114 0 W/21376114-21376114 FN4201-S SNP T -> C AC=1;AN=170;BQB=0.982758;DP=2495;DP4=1185,1130,12,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.00959e-12;MQSB=0.27421;RPB=0.998882;SGB=-92.7586;VDB=0.191274;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.8:21380124 chr08:021380124 0 W/21380124-21380124 FN911-S Single Base Substitution T-C INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2337.SNP.8:21380454 chr08:021380454 0 W/21380454-21380454 FN2337 SNP A -> C AC=1;AN=192;BQB=0.140121;DP=4883;DP4=2007,2509,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.84624e-11;MQSB=0.999983;RPB=0.999172;SGB=-11.3826;VDB=0.401104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.8:21388797 chr08:021388797 0 W/21388797-21388797 FN2221-S SNP G -> T AC=1;AN=190;BQB=0.94096;DP=4999;DP4=2255,2403,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0362072;MQB=0.563841;MQSB=0.00332488;RPB=0.835614;SGB=24.3115;VDB=0.111796;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A798|1090|LOC_Os08g34110|protein_coding|CODING|LOC_Os08g34110.1|5|1) FN2308.SNP.8:21392562 chr08:021392562 0 W/21392562-21392562 FN2308 SNP C -> A AC=1;AN=192;BQB=0.287019;DP=4682;DP4=2511,1917,13,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.21244e-10;MQSB=0.357911;RPB=0.784603;SGB=31.4783;VDB=0.423372;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.8:21396007 chr08:021396007 0 W/21396007-21396007 FN-189 Single Base Substitution C-G INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3855-S.SNP.8:21405748 chr08:021405748 0 W/21405748-21405748 FN3855-S SNP G -> T AC=1;AN=158;BQB=0.883577;DP=2971;DP4=1386,1476,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.1256e-08;MQSB=0.999705;RPB=0.969549;SGB=21.4493;VDB=0.987311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.8:21409784 chr08:021409784 0 W/21409784-21409784 FN2313 SNP G -> T AC=1;AN=192;BQB=0.0137595;DP=5032;DP4=2674,2099,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95891e-11;MQSB=0.00503482;RPB=0.847299;SGB=18.3052;VDB=0.175798;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.8:21420844 chr08:021420844 0 W/21420844-21420844 FN4147-S SNP T -> C AC=1;AN=170;BQB=0.980255;DP=2273;DP4=1187,1008,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.62774e-06;MQSB=0.980398;RPB=0.11068;SGB=34.5445;VDB=0.657359;EFF=UTR_3_PRIME(MODIFIER||938||288|LOC_Os08g34170|protein_coding|CODING|LOC_Os08g34170.1|1|1) FN1677-S.SNP.8:21422967 chr08:021422967 0 W/21422967-21422967 FN1677-S SNP A -> G AC=1;AN=188;BQB=0.2513;DP=4213;DP4=2051,2117,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.10907e-10;MQSB=0.856253;RPB=0.984891;SGB=-101.181;VDB=0.820274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.8:21427032 chr08:021427032 0 W/21427032-21427032 FN1096-S Single Base Substitution C-T INTRON HET SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1762-S.SNP.8:21431603 chr08:021431603 0 W/21431603-21431603 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.976046;DP=3863;DP4=1927,1890,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.32929e-07;MQSB=0.926685;RPB=0.061666;SGB=8.62479;VDB=0.67978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.8:21433171 chr08:021433171 0 W/21433171-21433171 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.940814;DP=5039;DP4=2505,2352,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.71659e-09;MQSB=0.958271;RPB=0.361134;SGB=68.0801;VDB=0.36192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.8:21436305 chr08:021436305 0 W/21436305-21436305 FN1268-S Single Base Substitution C-A INTRON HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN-159.SNP.8:21436450 chr08:021436450 0 W/21436450-21436450 FN-159 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g34190 stromal cell-derived factor 2-like protein precursor, putative, expressed SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN1718-S.SNP.8:21438256 chr08:021438256 0 W/21438256-21438256 FN1718-S SNP T -> A AC=2;AN=188;BQB=0.380702;DP=3106;DP4=1389,1653,13,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.33737e-16;MQSB=0.997171;RPB=0.92744;SGB=-280.102;VDB=0.155181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.8:21439001 chr08:021439001 0 W/21439001-21439001 FN2538-S SNP C -> T AC=1;AN=198;BQB=0.975428;DP=3685;DP4=1517,1850,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.8825e-08;MQSB=0.265494;RPB=0.43629;SGB=49.5489;VDB=0.101094;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A14|72|LOC_Os08g34200|protein_coding|CODING|LOC_Os08g34200.1|1|1) FN2538-S.SNP.8:21439002 chr08:021439002 0 W/21439002-21439002 FN2538-S SNP G -> T AC=1;AN=198;BQB=0.602502;DP=3688;DP4=1378,1853,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.14493e-08;MQSB=0.527059;RPB=0.518337;SGB=49.5489;VDB=0.0964083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A15S|72|LOC_Os08g34200|protein_coding|CODING|LOC_Os08g34200.1|1|1) FN465-S.SNP.8:21450296 chr08:021450296 0 W/21450296-21450296 FN465-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3675-S.SNP.8:21450475 chr08:021450475 0 W/21450475-21450475 FN3675-S SNP A -> G AC=2;AN=190;BQB=0.935725;DP=2884;DP4=1503,1200,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.69482e-13;MQSB=0.986502;RPB=0.880589;SGB=-39.8934;VDB=0.461442;EFF=INTRON(MODIFIER||||499|LOC_Os08g34210|protein_coding|CODING|LOC_Os08g34210.1|8|1),INTRON(MODIFIER||||438|LOC_Os08g34210|protein_coding|CODING|LOC_Os08g34210.2|7|1) FN2542-S.SNP.8:21458443 chr08:021458443 0 W/21458443-21458443 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.949343;DP=4283;DP4=1941,2153,5,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233481;MQB=4.69289e-12;MQSB=0.969683;RPB=0.997706;SGB=14.1348;VDB=0.766411;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P325S|802|LOC_Os08g34230|protein_coding|CODING|LOC_Os08g34230.1|1|1) FN2385.SNP.8:21470819 chr08:021470819 0 W/21470819-21470819 FN2385 SNP T -> C AC=1;AN=192;BQB=0.994215;DP=11531;DP4=7566,3494,28,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.75464e-20;MQSB=0.799949;RPB=0.52023;SGB=114.631;VDB=0.549488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.8:21499304 chr08:021499304 0 W/21499304-21499304 FN1525-S Single Base Substitution A-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3534-S.SNP.8:21510951 chr08:021510951 0 W/21510951-21510951 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.922844;DP=2904;DP4=1504,1311,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.77151e-10;MQSB=0.996903;RPB=0.94793;SGB=80.782;VDB=0.900171;EFF=INTRON(MODIFIER||||361|LOC_Os08g34280|protein_coding|CODING|LOC_Os08g34280.1|3|1) FN2771-S.SNP.8:21515561 chr08:021515561 0 W/21515561-21515561 FN2771-S SNP A -> T AC=1;AN=198;BQB=0.876809;DP=4178;DP4=2060,1838,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.72215e-09;MQSB=0.9505;RPB=0.294083;SGB=-13.8358;VDB=0.713206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.8:21517111 chr08:021517111 0 W/21517111-21517111 FN2686-S SNP A -> G AC=1;AN=200;BQB=0.758109;DP=4225;DP4=2524,1511,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000432331;MQSB=4.90569e-06;RPB=0.992404;SGB=25.849;VDB=0.667402;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.8:21519429 chr08:021519429 0 W/21519429-21519429 FN462-S Single Base Substitution A-G INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN-124.SNP.8:21520531 chr08:021520531 0 W/21520531-21520531 FN-124 Single Base Substitution G-T INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN1299-S.SNP.8:21520951 chr08:021520951 0 W/21520951-21520951 FN1299-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1049-S.SNP.8:21521246 chr08:021521246 0 W/21521246-21521246 FN1049-S Single Base Substitution C-T INTERGENIC HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2795-S.SNP.8:21521246 chr08:021521246 0 W/21521246-21521246 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.988832;DP=4317;DP4=2145,1776,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000231642;MQB=7.656e-11;MQSB=0.750952;RPB=0.468817;SGB=68.91;VDB=0.395691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.8:21521246 chr08:021521246 0 W/21521246-21521246 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.868956;DP=2374;DP4=1176,1000,12,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.77238e-14;MQSB=0.598254;RPB=0.978233;SGB=67.7679;VDB=0.0983994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.8:21532154 chr08:021532154 0 W/21532154-21532154 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.979912;DP=2425;DP4=1182,1158,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82278e-07;MQSB=0.974087;RPB=0.57769;SGB=28.7043;VDB=0.443772;EFF=SPLICE_SITE_REGION(LOW||||461|LOC_Os08g34310|protein_coding|CODING|LOC_Os08g34310.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L283|461|LOC_Os08g34310|protein_coding|CODING|LOC_Os08g34310.1|4|1) FN2421.SNP.8:21533062 chr08:021533062 0 W/21533062-21533062 FN2421 SNP T -> C AC=2;AN=200;BQB=0.892352;DP=4550;DP4=2262,1896,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.04371e-20;MQSB=0.643822;RPB=0.967599;SGB=134.004;VDB=0.316582;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E259|461|LOC_Os08g34310|protein_coding|CODING|LOC_Os08g34310.1|3|1) FN3807-S.SNP.8:21546508 chr08:021546508 0 W/21546508-21546508 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.998741;DP=3094;DP4=1062,1936,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.49083e-06;MQSB=0.996959;RPB=0.951332;SGB=53.6492;VDB=0.536049;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.8:21552484 chr08:021552484 0 W/21552484-21552484 FN1718-S SNP T -> A AC=2;AN=188;BQB=0.865245;DP=2216;DP4=1376,784,17,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.39671e-11;MQSB=0.983481;RPB=0.660416;SGB=48.9658;VDB=0.394141;EFF=UTR_5_PRIME(MODIFIER||4014||498|LOC_Os08g34340|protein_coding|CODING|LOC_Os08g34340.1|3|1) FN775-S.SNP.8:21567871 chr08:021567871 0 W/21567871-21567871 FN775-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN923-S.SNP.8:21571628 chr08:021571628 0 W/21571628-21571628 FN923-S Single Base Substitution C-T INTRON HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN-223.SNP.8:21573894 chr08:021573894 0 W/21573894-21573894 FN-223 Single Base Substitution A-C INTRON HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3992-S.SNP.8:21577541 chr08:021577541 0 W/21577541-21577541 FN3992-S SNP T -> C AC=2;AN=168;BQB=0.698988;DP=2461;DP4=1275,996,21,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.77918e-15;MQSB=0.947148;RPB=0.581982;SGB=-8.47945;VDB=0.25653;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.8:21578156 chr08:021578156 0 W/21578156-21578156 FN-329 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN700-S.SNP.8:21582647 chr08:021582647 0 W/21582647-21582647 FN700-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN-153.SNP.8:21584768 chr08:021584768 0 W/21584768-21584768 FN-153 Single Base Substitution G-C INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN4147-S.SNP.8:21585394 chr08:021585394 0 W/21585394-21585394 FN4147-S SNP G -> A AC=1;AN=170;BQB=0.959014;DP=2220;DP4=962,1178,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.62106e-07;MQSB=0.946531;RPB=0.933712;SGB=47.8722;VDB=0.888275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.8:21585785 chr08:021585785 0 W/21585785-21585785 FN1320-S Single Base Substitution T-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2449.SNP.8:21587864 chr08:021587864 0 W/21587864-21587864 FN2449 SNP A -> C AC=1;AN=200;BQB=0.933136;DP=4120;DP4=2074,1766,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00135e-10;MQSB=0.0938402;RPB=0.0060304;SGB=32.0901;VDB=0.0245024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2677-S.SNP.8:21590989 chr08:021590989 0 W/21590989-21590989 FN2677-S SNP A -> T AC=2;AN=200;BQB=0.970989;DP=5442;DP4=2587,2571,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.89893e-22;MQSB=0.872041;RPB=0.991793;SGB=152.03;VDB=0.649705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.8:21591104 chr08:021591104 0 W/21591104-21591104 FN2495 SNP C -> G AC=1;AN=200;BQB=0.734297;DP=5602;DP4=2781,2498,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71033e-10;MQSB=0.755107;RPB=0.98746;SGB=77.2904;VDB=0.987001;EFF=UTR_3_PRIME(MODIFIER||133||227|LOC_Os08g34390|protein_coding|CODING|LOC_Os08g34390.1|1|1) FN2452.SNP.8:21593111 chr08:021593111 0 W/21593111-21593111 FN2452 SNP A -> C AC=1;AN=200;BQB=0.999981;DP=4974;DP4=2505,2215,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.18557e-11;MQSB=0.709499;RPB=0.843138;SGB=39.9056;VDB=0.0613719;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.8:21593394 chr08:021593394 0 W/21593394-21593394 FN436-S Single Base Substitution A-G INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2147-S.SNP.8:21595431 chr08:021595431 0 W/21595431-21595431 FN2147-S SNP A -> G AC=1;AN=168;BQB=0.00247012;DP=4115;DP4=2084,1984,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.11221e-07;MQSB=0.927941;RPB=0.999423;SGB=-183.337;VDB=0.922998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.8:21596089 chr08:021596089 0 W/21596089-21596089 FN2667-S SNP T -> A AC=1;AN=200;BQB=0.739166;DP=4853;DP4=2280,2352,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52065e-08;MQSB=0.995261;RPB=0.999857;SGB=47.4799;VDB=0.157295;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.8:21602750 chr08:021602750 0 W/21602750-21602750 FN_N1-26-1 Single Base Substitution G-C Homo LOC_Os08g34400 expressed protein SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1211-S.SNP.8:21614163 chr08:021614163 0 W/21614163-21614163 FN1211-S Single Base Substitution C-T INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1211-S.SNP.8:21614166 chr08:021614166 0 W/21614166-21614166 FN1211-S Single Base Substitution A-T INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN931-S.SNP.8:21623966 chr08:021623966 0 W/21623966-21623966 FN931-S Single Base Substitution A-G INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3738-S.SNP.8:21647394 chr08:021647394 0 W/21647394-21647394 FN3738-S SNP C -> T AC=1;AN=190;BQB=0.999565;DP=2830;DP4=1377,1362,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.98629e-08;MQSB=0.932491;RPB=0.828538;SGB=21.1058;VDB=0.96723;EFF=INTRON(MODIFIER||||423|LOC_Os08g34500|protein_coding|CODING|LOC_Os08g34500.1|4|1) FN-278.SNP.8:21650572 chr08:021650572 0 W/21650572-21650572 FN-278 Single Base Substitution T-C INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN1515-S.SNP.8:21659033 chr08:021659033 0 W/21659033-21659033 FN1515-S Single Base Substitution C-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2191-S.SNP.8:21661365 chr08:021661365 0 W/21661365-21661365 FN2191-S SNP T -> A AC=1;AN=190;BQB=0.828043;DP=5052;DP4=2355,2425,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98604e-13;MQSB=0.125221;RPB=0.995967;SGB=22.7576;VDB=0.225392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.8:21661366 chr08:021661366 0 W/21661366-21661366 FN2191-S SNP G -> A AC=1;AN=190;BQB=0.987123;DP=5055;DP4=2301,2421,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09925e-11;MQSB=0.191118;RPB=0.927861;SGB=75.1932;VDB=0.201568;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.8:21661599 chr08:021661599 0 W/21661599-21661599 FN509-S Single Base Substitution G-T INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN-256.SNP.8:21663344 chr08:021663344 0 W/21663344-21663344 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1543-S.SNP.8:21663798 chr08:021663798 0 W/21663798-21663798 FN1543-S Single Base Substitution T-C INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1333-S.SNP.8:21668966 chr08:021668966 0 W/21668966-21668966 FN1333-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN516-S.SNP.8:21671913 chr08:021671913 0 W/21671913-21671913 FN516-S Single Base Substitution G-C INTERGENIC HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN3477-S.SNP.8:21682579 chr08:021682579 0 W/21682579-21682579 FN3477-S SNP A -> C AC=1;AN=184;BQB=0.84163;DP=1530;DP4=859,557,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0660131;MQB=0.892131;MQSB=0;RPB=0.976745;SGB=25.1826;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.8:21686661 chr08:021686661 0 W/21686661-21686661 FN2532-S SNP T -> C AC=1;AN=198;BQB=0.406149;DP=4293;DP4=2117,1893,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232937;MQB=2.46447e-09;MQSB=0.0525413;RPB=0.993486;SGB=67.9293;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.8:21687051 chr08:021687051 0 W/21687051-21687051 FN-265 Single Base Substitution C-T INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2360.SNP.8:21687175 chr08:021687175 0 W/21687175-21687175 FN2360 SNP C -> A AC=2;AN=192;BQB=0.507944;DP=4947;DP4=2282,2401,21,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.03067e-19;MQSB=0.666975;RPB=0.782599;SGB=2.72612;VDB=0.568865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.8:21690160 chr08:021690160 0 W/21690160-21690160 FN3472-S SNP T -> A AC=1;AN=184;BQB=0.955267;DP=3163;DP4=1473,1603,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.24756e-11;MQSB=0.992407;RPB=0.695829;SGB=84.9167;VDB=0.231395;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.8:21694592 chr08:021694592 0 W/21694592-21694592 FN670-S Single Base Substitution A-G INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1639-S.SNP.8:21698337 chr08:021698337 0 W/21698337-21698337 FN1639-S Single Base Substitution G-A INTERGENIC Homo SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN-163.SNP.8:21704903 chr08:021704903 0 W/21704903-21704903 FN-163 Single Base Substitution T-A INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN1732-S.SNP.8:21705642 chr08:021705642 0 W/21705642-21705642 FN1732-S SNP T -> C AC=1;AN=188;BQB=0.909035;DP=3445;DP4=1340,2071,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.05753e-11;MQSB=0.997966;RPB=0.987172;SGB=-39.1914;VDB=0.0548312;EFF=INTERGENIC(MODIFIER||||||||||1) FN1334-S.SNP.8:21712900 chr08:021712900 0 W/21712900-21712900 FN1334-S Single Base Substitution A-G INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN768-S.SNP.8:21714254 chr08:021714254 0 W/21714254-21714254 FN768-S Single Base Substitution T-A INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2572-S.SNP.8:21715424 chr08:021715424 0 W/21715424-21715424 FN2572-S Single Base Substitution C-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2790-S.SNP.8:21720002 chr08:021720002 0 W/21720002-21720002 FN2790-S SNP C -> G AC=1;AN=198;BQB=0.78257;DP=4019;DP4=1716,1995,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.58662e-06;MQSB=0.99255;RPB=0.948912;SGB=29.3637;VDB=0.244899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.8:21727898 chr08:021727898 0 W/21727898-21727898 FN2475 SNP A -> C AC=2;AN=200;BQB=0.119194;DP=4599;DP4=2214,2090,20,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.2114e-25;MQSB=0.933859;RPB=0.620438;SGB=92.009;VDB=0.0733971;EFF=INTERGENIC(MODIFIER||||||||||1) FN-380.SNP.8:21731931 chr08:021731931 0 W/21731931-21731931 FN-380 Single Base Substitution C-A INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3512-S.SNP.8:21738556 chr08:021738556 0 W/21738556-21738556 FN3512-S SNP C -> A AC=1;AN=188;BQB=0.998773;DP=3143;DP4=1744,1262,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0184537;MQB=0.353373;MQSB=0.000150385;RPB=0.411894;SGB=76.2387;VDB=0.921811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.8:21746213 chr08:021746213 0 W/21746213-21746213 FN1129-S Single Base Substitution G-T INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1473-S.SNP.8:21747708 chr08:021747708 0 W/21747708-21747708 FN1473-S Single Base Substitution T-A INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2780-S.SNP.8:21748158 chr08:021748158 0 W/21748158-21748158 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.96441;DP=4054;DP4=2076,1742,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07236e-11;MQSB=0.944495;RPB=0.125178;SGB=31.9395;VDB=0.481443;EFF=INTRON(MODIFIER||||76|LOC_Os08g34610|protein_coding|CODING|LOC_Os08g34610.1|3|1) FN1590-S.SNP.8:21750557 chr08:021750557 0 W/21750557-21750557 FN1590-S Single Base Substitution C-T INTERGENIC Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN2259-S.SNP.8:21750557 chr08:021750557 0 W/21750557-21750557 FN2259-S SNP C -> T AC=2;AN=190;BQB=0.966111;DP=4855;DP4=2431,2115,23,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13261e-20;MQSB=0.831013;RPB=0.64964;SGB=117.84;VDB=0.536439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.8:21750557 chr08:021750557 0 W/21750557-21750557 FN3316-S SNP C -> T AC=2;AN=184;BQB=0.907957;DP=2883;DP4=1372,1396,10,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.56454e-12;MQSB=0.999397;RPB=0.890147;SGB=74.4875;VDB=0.945195;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.8:21750557 chr08:021750557 0 W/21750557-21750557 FN4111-S SNP C -> T AC=2;AN=182;BQB=0.990977;DP=2878;DP4=1371,1386,40,30;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.27642e-40;MQSB=0.890875;RPB=0.769207;SGB=304.75;VDB=0.917559;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.8:21750557 chr08:021750557 0 W/21750557-21750557 FN718-S Single Base Substitution C-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN3426-S.SNP.8:21757101 chr08:021757101 0 W/21757101-21757101 FN3426-S SNP G -> A AC=1;AN=184;BQB=0.988062;DP=2878;DP4=1340,1470,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.82214e-07;MQSB=0.977343;RPB=0.999846;SGB=48.7425;VDB=0.288478;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1026|1112|LOC_Os08g34640|protein_coding|CODING|LOC_Os08g34640.1|3|1) FN3976-S.SNP.8:21762015 chr08:021762015 0 W/21762015-21762015 FN3976-S SNP C -> A AC=1;AN=168;BQB=0.99986;DP=2807;DP4=1438,1242,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01145e-07;MQSB=0.981193;RPB=0.998482;SGB=38.1788;VDB=0.827836;EFF=UTR_5_PRIME(MODIFIER||1407||1112|LOC_Os08g34640|protein_coding|CODING|LOC_Os08g34640.1|1|1) FN3534-S.SNP.8:21787370 chr08:021787370 0 W/21787370-21787370 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.991872;DP=2633;DP4=1367,1180,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.33567e-09;MQSB=0.879765;RPB=0.883468;SGB=58.0655;VDB=0.559121;EFF=INTERGENIC(MODIFIER||||||||||1) FN-108.SNP.8:21790032 chr08:021790032 0 W/21790032-21790032 FN-108 Single Base Substitution T-C INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN541-S.SNP.8:21808354 chr08:021808354 0 W/21808354-21808354 FN541-S Single Base Substitution T-A INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2430.SNP.8:21825065 chr08:021825065 0 W/21825065-21825065 FN2430 SNP G -> A AC=1;AN=200;BQB=0.0304211;DP=4931;DP4=2373,2274,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00976e-05;MQSB=0.978095;RPB=0.888943;SGB=16.4591;VDB=0.852905;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.8:21826438 chr08:021826438 0 W/21826438-21826438 FN988-S Single Base Substitution C-T INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4021-S.SNP.8:21826810 chr08:021826810 0 W/21826810-21826810 FN4021-S SNP A -> G AC=1;AN=168;BQB=0.999995;DP=2774;DP4=1488,1149,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02682e-11;MQSB=0.645266;RPB=0.990385;SGB=55.3328;VDB=0.863507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.8:21828224 chr08:021828224 0 W/21828224-21828224 FN2374 SNP T -> A AC=1;AN=192;BQB=0.337849;DP=5476;DP4=2877,2318,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000182615;MQB=2.16375e-08;MQSB=0.803662;RPB=0.999716;SGB=53.7748;VDB=0.340239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.8:21832031 chr08:021832031 0 W/21832031-21832031 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2351.SNP.8:21832252 chr08:021832252 0 W/21832252-21832252 FN2351 SNP A -> T AC=1;AN=192;BQB=0.525974;DP=5079;DP4=2495,2258,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.52204e-07;MQSB=0.698414;RPB=0.166456;SGB=43.3444;VDB=0.582306;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.8:21832816 chr08:021832816 0 W/21832816-21832816 FN633-S Single Base Substitution G-C INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN-102.SNP.8:21833800 chr08:021833800 0 W/21833800-21833800 FN-102 Single Base Substitution T-A INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2105-S.SNP.8:21834904 chr08:021834904 0 W/21834904-21834904 FN2105-S SNP C -> T AC=1;AN=168;BQB=0.0849066;DP=3784;DP4=2058,1685,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.41178e-06;MQSB=0.862451;RPB=0.912947;SGB=-108.641;VDB=0.473428;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.8:21841522 chr08:021841522 0 W/21841522-21841522 FN-163 Single Base Substitution A-G INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2578-S.SNP.8:21849602 chr08:021849602 0 W/21849602-21849602 FN2578-S SNP T -> C AC=2;AN=198;BQB=0.790397;DP=3763;DP4=1571,1866,9,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.73969e-12;MQSB=0.998104;RPB=0.986908;SGB=90.9049;VDB=0.821884;EFF=INTRON(MODIFIER||||970|LOC_Os08g34760|protein_coding|CODING|LOC_Os08g34760.1|4|1) FN2295.SNP.8:21850607 chr08:021850607 0 W/21850607-21850607 FN2295 SNP A -> T AC=1;AN=192;BQB=0.993157;DP=4456;DP4=1808,2066,9,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.2749e-14;MQSB=0.00211034;RPB=0.99973;SGB=26.127;VDB=0.496571;EFF=INTRON(MODIFIER||||970|LOC_Os08g34760|protein_coding|CODING|LOC_Os08g34760.1|4|1) FN2295.SNP.8:21850608 chr08:021850608 0 W/21850608-21850608 FN2295 SNP G -> T AC=1;AN=192;BQB=0.330937;DP=4454;DP4=2016,2163,12,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.99114e-14;MQSB=0.000456788;RPB=0.696901;SGB=-3.48171;VDB=0.538346;EFF=INTRON(MODIFIER||||970|LOC_Os08g34760|protein_coding|CODING|LOC_Os08g34760.1|4|1) FN2689-S.SNP.8:21868870 chr08:021868870 0 W/21868870-21868870 FN2689-S SNP A -> T AC=1;AN=200;BQB=0.982555;DP=5000;DP4=2434,2386,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06062e-12;MQSB=0.996172;RPB=0.879157;SGB=91.1059;VDB=0.288873;EFF=INTERGENIC(MODIFIER||||||||||1) FN738-S.SNP.8:21875024 chr08:021875024 0 W/21875024-21875024 FN738-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2221-S.SNP.8:21882067 chr08:021882067 0 W/21882067-21882067 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.999831;DP=4851;DP4=1948,2690,3,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000412286;MQB=5.46672e-08;MQSB=0.795267;RPB=0.918381;SGB=62.7569;VDB=0.51429;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.8:21886442 chr08:021886442 0 W/21886442-21886442 FN487-S Single Base Substitution G-T INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2124-S.SNP.8:21896232 chr08:021896232 0 W/21896232-21896232 FN2124-S SNP G -> A AC=1;AN=168;BQB=0.914873;DP=4792;DP4=1139,3504,16,27;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.272538;MQB=0.291658;MQSB=0;RPB=0.009896;SGB=-52.0269;VDB=0.0754651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.8:21896233 chr08:021896233 0 W/21896233-21896233 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.908509;DP=4785;DP4=1119,3494,17,31;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.268339;MQB=0.470269;MQSB=0;RPB=0.0296843;SGB=-316.997;VDB=0.277002;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.8:21897387 chr08:021897387 0 W/21897387-21897387 W450-6-1 Single Base Substitution A-T INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN441-S.SNP.8:21900330 chr08:021900330 0 W/21900330-21900330 FN441-S Single Base Substitution A-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2458.SNP.8:21905014 chr08:021905014 0 W/21905014-21905014 FN2458 SNP G -> A AC=1;AN=200;BQB=0.575181;DP=4724;DP4=2195,2287,16,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00187e-16;MQSB=0.96285;RPB=0.192888;SGB=141.763;VDB=0.982333;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.8:21906220 chr08:021906220 0 W/21906220-21906220 FN530-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g34820 OsFBX292 - F-box domain containing protein, expressed SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3286-S.SNP.8:21915372 chr08:021915372 0 W/21915372-21915372 FN3286-S SNP C -> A AC=2;AN=184;BQB=0.966918;DP=2290;DP4=938,1167,22,14;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.5113e-08;MQSB=0;RPB=0.888015;SGB=107.258;VDB=0.276281;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.8:21917920 chr08:021917920 0 W/21917920-21917920 FN721-S Single Base Substitution T-C INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN4052-S.SNP.8:21921465 chr08:021921465 0 W/21921465-21921465 FN4052-S SNP T -> A AC=1;AN=168;BQB=0.577548;DP=4023;DP4=2131,1747,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.00149142;MQB=0.556041;MQSB=1.87472e-14;RPB=0.859866;SGB=34.748;VDB=0.524632;EFF=INTRON(MODIFIER||||1633|LOC_Os08g34850|protein_coding|CODING|LOC_Os08g34850.1|18|1) FN3797-S.SNP.8:21931447 chr08:021931447 0 W/21931447-21931447 FN3797-S SNP C -> T AC=1;AN=190;BQB=0.354987;DP=2817;DP4=1444,1266,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.85655e-07;MQSB=0.425955;RPB=0.991353;SGB=23.6597;VDB=0.67157;EFF=INTRON(MODIFIER||||1633|LOC_Os08g34850|protein_coding|CODING|LOC_Os08g34850.1|5|1) FN1241-S.SNP.8:21935763 chr08:021935763 0 W/21935763-21935763 FN1241-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g34860 OsFBX293 - F-box domain containing protein, expressed SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN940-S.SNP.8:21958585 chr08:021958585 0 W/21958585-21958585 FN940-S Single Base Substitution C-G INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN480-S.SNP.8:21959463 chr08:021959463 0 W/21959463-21959463 FN480-S Single Base Substitution G-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN949-S.SNP.8:21969501 chr08:021969501 0 W/21969501-21969501 FN949-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. W466-5-1.SNP.8:21970992 chr08:021970992 0 W/21970992-21970992 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-348.SNP.8:21973604 chr08:021973604 0 W/21973604-21973604 FN-348 Single Base Substitution A-G UTR_3_PRIME HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1463-S.SNP.8:21974167 chr08:021974167 0 W/21974167-21974167 FN1463-S Single Base Substitution G-A START_GAINED HOMO LOC_Os08g34895 expressed protein SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN-303.SNP.8:21977348 chr08:021977348 0 W/21977348-21977348 FN-303 Single Base Substitution G-T INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3531-S.SNP.8:21987727 chr08:021987727 0 W/21987727-21987727 FN3531-S SNP C -> T AC=2;AN=188;BQB=0.47867;DP=3329;DP4=1567,1625,20,8;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=2.14206e-07;MQSB=0.0124794;RPB=0.999999;SGB=89.1337;VDB=0.76923;EFF=INTRON(MODIFIER||||134|LOC_Os08g34920|protein_coding|CODING|LOC_Os08g34920.1|1|1) FN1716-S.SNP.8:21990713 chr08:021990713 0 W/21990713-21990713 FN1716-S SNP T -> G AC=1;AN=188;BQB=0.999992;DP=3308;DP4=1623,1647,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.99698e-12;MQSB=0.999709;RPB=0.371924;SGB=13.2547;VDB=0.189449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.8:21995868 chr08:021995868 0 W/21995868-21995868 FN2166-S SNP T -> A AC=1;AN=168;BQB=0.991713;DP=3888;DP4=1842,2015,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.4743e-07;MQSB=0.96442;RPB=0.999256;SGB=1.32907;VDB=0.482332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.8:21997279 chr08:021997279 0 W/21997279-21997279 FN-344 Single Base Substitution G-A INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2568-S.SNP.8:21997604 chr08:021997604 0 W/21997604-21997604 FN2568-S SNP G -> C AC=2;AN=198;BQB=0.735505;DP=4294;DP4=2153,1935,14,14;HOB=0.019998;ICB=0.495001;MQ=37;MQ0F=0.0214252;MQB=0.849593;MQSB=2.24979e-27;RPB=0.142414;SGB=90.4807;VDB=0.666961;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.8:22005486 chr08:022005486 0 W/22005486-22005486 FN946-S Single Base Substitution C-T INTRON HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN_546-3-1.SNP.8:22007893 chr08:022007893 0 W/22007893-22007893 FN_546-3-1 Single Base Substitution A-C Homo LOC_Os08g34950 chaperonin Cpn60/TCP-1, putative, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN670-S.SNP.8:22009833 chr08:022009833 0 W/22009833-22009833 FN670-S Single Base Substitution G-T INTRON HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN1443-S.SNP.8:22013514 chr08:022013514 0 W/22013514-22013514 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN778-S.SNP.8:22016696 chr08:022016696 0 W/22016696-22016696 FN778-S Single Base Substitution T-A INTRON HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN1430-S.SNP.8:22028049 chr08:022028049 0 W/22028049-22028049 FN1430-S Single Base Substitution G-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN459-S.SNP.8:22037782 chr08:022037782 0 W/22037782-22037782 FN459-S Single Base Substitution T-C INTERGENIC HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN722-S.SNP.8:22043197 chr08:022043197 0 W/22043197-22043197 FN722-S Single Base Substitution C-T INTRON HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN1764-S.SNP.8:22046459 chr08:022046459 0 W/22046459-22046459 FN1764-S SNP G -> C AC=2;AN=188;BQB=0.615447;DP=2846;DP4=1672,1136,16,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.01148e-12;MQSB=0.920984;RPB=0.97821;SGB=-41.0182;VDB=0.62217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I4M|761|LOC_Os08g35000|protein_coding|CODING|LOC_Os08g35000.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I4M|761|LOC_Os08g35000|protein_coding|CODING|LOC_Os08g35000.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I4M|761|LOC_Os08g35000|protein_coding|CODING|LOC_Os08g35000.4|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I4M|761|LOC_Os08g35000|protein_coding|CODING|LOC_Os08g35000.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I4M|761|LOC_Os08g35000|protein_coding|CODING|LOC_Os08g35000.5|3|1) FN2593-S.SNP.8:22054766 chr08:022054766 0 W/22054766-22054766 FN2593-S SNP T -> C AC=2;AN=198;BQB=0.706812;DP=4270;DP4=2081,1921,30,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.19411e-33;MQSB=0.887395;RPB=0.98524;SGB=256.329;VDB=0.515635;EFF=INTRON(MODIFIER||||301|LOC_Os08g35010|protein_coding|CODING|LOC_Os08g35010.1|6|1) FN2469.SNP.8:22055256 chr08:022055256 0 W/22055256-22055256 FN2469 SNP G -> A AC=1;AN=200;BQB=0.782885;DP=5022;DP4=2257,2505,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.09811e-07;MQSB=0.698844;RPB=0.849268;SGB=29.4541;VDB=0.157852;EFF=INTRON(MODIFIER||||301|LOC_Os08g35010|protein_coding|CODING|LOC_Os08g35010.1|4|1) FN2589-S.SNP.8:22056890 chr08:022056890 0 W/22056890-22056890 FN2589-S SNP T -> A AC=2;AN=198;BQB=0.659022;DP=4045;DP4=1800,1966,25,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.75817e-20;MQSB=0.602816;RPB=0.957319;SGB=164.427;VDB=0.750062;EFF=INTRON(MODIFIER||||301|LOC_Os08g35010|protein_coding|CODING|LOC_Os08g35010.1|2|1) FN3592-S.SNP.8:22057014 chr08:022057014 0 W/22057014-22057014 FN3592-S SNP G -> A AC=1;AN=188;BQB=0.512258;DP=2130;DP4=1002,980,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000440386;MQSB=0.00162089;RPB=0.670187;SGB=32.441;VDB=0.104105;EFF=INTRON(MODIFIER||||301|LOC_Os08g35010|protein_coding|CODING|LOC_Os08g35010.1|2|1) FN1436-S.SNP.8:22057380 chr08:022057380 0 W/22057380-22057380 FN1436-S Single Base Substitution A-G INTRON HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2188-S.SNP.8:22060050 chr08:022060050 0 W/22060050-22060050 FN2188-S SNP T -> A AC=1;AN=190;BQB=0.517327;DP=4199;DP4=1672,2261,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000238152;MQB=1.29136e-09;MQSB=0.975438;RPB=0.565732;SGB=71.6393;VDB=0.581412;EFF=UTR_5_PRIME(MODIFIER||1073||707|LOC_Os08g35020|protein_coding|CODING|LOC_Os08g35020.1|1|1) FN2731-S.SNP.8:22060149 chr08:022060149 0 W/22060149-22060149 FN2731-S SNP T -> C AC=2;AN=200;BQB=0.590513;DP=4672;DP4=2276,2138,29,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.66234e-25;MQSB=0.81777;RPB=0.607195;SGB=206.235;VDB=0.594597;EFF=UTR_5_PRIME(MODIFIER||974||707|LOC_Os08g35020|protein_coding|CODING|LOC_Os08g35020.1|1|1) FN963-S.SNP.8:22063043 chr08:022063043 0 W/22063043-22063043 FN963-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN1118-S.SNP.8:22065262 chr08:022065262 0 W/22065262-22065262 FN1118-S Single Base Substitution C-G INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1516-S.SNP.8:22068428 chr08:022068428 0 W/22068428-22068428 FN1516-S Single Base Substitution T-A INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN-62.SNP.8:22072409 chr08:022072409 0 W/22072409-22072409 FN-62 Single Base Substitution G-T INTERGENIC HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN3994-S.SNP.8:22076979 chr08:022076979 0 W/22076979-22076979 FN3994-S SNP T -> C AC=1;AN=168;BQB=0.857803;DP=2922;DP4=1375,1338,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0160849;MQB=0.0657242;MQSB=0.0491386;RPB=0.973885;SGB=19.7539;VDB=0.543455;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I180V|687|LOC_Os08g35040|protein_coding|CODING|LOC_Os08g35040.1|1|1) FN1399-S.SNP.8:22091462 chr08:022091462 0 W/22091462-22091462 FN1399-S Single Base Substitution T-A INTRON HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-201.SNP.8:22093863 chr08:022093863 0 W/22093863-22093863 FN-201 Single Base Substitution T-C INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2435.SNP.8:22093930 chr08:022093930 0 W/22093930-22093930 FN2435 SNP G -> A AC=1;AN=200;BQB=0.993063;DP=4249;DP4=2004,2008,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80107e-15;MQSB=0.323926;RPB=0.999549;SGB=109.527;VDB=0.622681;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.8:22097754 chr08:022097754 0 W/22097754-22097754 FN3987-S SNP A -> G AC=1;AN=168;BQB=0.989116;DP=2595;DP4=1128,1349,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.53504e-07;MQSB=0.178888;RPB=0.852616;SGB=52.1728;VDB=0.360442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.8:22099746 chr08:022099746 0 W/22099746-22099746 FN2286 SNP G -> A AC=1;AN=192;BQB=0.371076;DP=4966;DP4=2358,2358,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18013e-11;MQSB=0.943745;RPB=0.812518;SGB=10.4835;VDB=0.435249;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.8:22106116 chr08:022106116 0 W/22106116-22106116 FN1252-S Single Base Substitution T-C INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2265-S.SNP.8:22110629 chr08:022110629 0 W/22110629-22110629 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.4181;DP=4251;DP4=1822,2162,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65702e-11;MQSB=0.683879;RPB=0.98873;SGB=68.0854;VDB=0.433944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.8:22110630 chr08:022110630 0 W/22110630-22110630 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.999349;DP=4250;DP4=1842,2147,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61383e-11;MQSB=0.518718;RPB=0.999864;SGB=68.0854;VDB=0.722748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.8:22114681 chr08:022114681 0 W/22114681-22114681 FN2754-S SNP T -> A AC=1;AN=200;BQB=0.835768;DP=5339;DP4=2192,2499,13,15;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=4.17277e-13;MQSB=0.959651;RPB=0.638292;SGB=25.5416;VDB=0.908002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.8:22118647 chr08:022118647 0 W/22118647-22118647 FN3678-S SNP G -> A AC=2;AN=188;BQB=0.994459;DP=1842;DP4=764,994,3,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.93374e-06;MQSB=0.694192;RPB=0.987265;SGB=49.0954;VDB=0.376268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.8:22119558 chr08:022119558 0 W/22119558-22119558 FN2407 SNP A -> T AC=2;AN=200;BQB=0.86315;DP=4405;DP4=2217,1747,32,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07341e-22;MQSB=0.942898;RPB=0.855373;SGB=49.6192;VDB=0.721849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.8:22132865 chr08:022132865 0 W/22132865-22132865 FN3492-S SNP C -> A AC=2;AN=184;BQB=0.406642;DP=2898;DP4=1306,1492,18,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.57915e-15;MQSB=0.804432;RPB=0.121691;SGB=152.744;VDB=0.739311;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.8:22138060 chr08:022138060 0 W/22138060-22138060 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.335479;DP=4187;DP4=1975,1863,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.85877e-11;MQSB=0.82654;RPB=0.785177;SGB=15.7299;VDB=0.831797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.8:22145971 chr08:022145971 0 W/22145971-22145971 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.803104;DP=2851;DP4=1561,1159,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66971e-08;MQSB=0.961052;RPB=0.751366;SGB=49.835;VDB=0.448518;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.8:22150279 chr08:022150279 0 W/22150279-22150279 FN979-S Single Base Substitution G-C INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN979-S.SNP.8:22150288 chr08:022150288 0 W/22150288-22150288 FN979-S Single Base Substitution G-T INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3678-S.SNP.8:22151877 chr08:022151877 0 W/22151877-22151877 FN3678-S SNP T -> A AC=1;AN=188;BQB=0.989223;DP=3040;DP4=1543,1333,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.55111e-08;MQSB=0.999851;RPB=0.996414;SGB=58.2031;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1353-S.SNP.8:22152585 chr08:022152585 0 W/22152585-22152585 FN1353-S Single Base Substitution A-G INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1436-S.SNP.8:22158886 chr08:022158886 0 W/22158886-22158886 FN1436-S Single Base Substitution C-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1436-S.SNP.8:22158887 chr08:022158887 0 W/22158887-22158887 FN1436-S Single Base Substitution C-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3821-S.SNP.8:22165166 chr08:022165166 0 W/22165166-22165166 FN3821-S SNP C -> T AC=1;AN=190;BQB=0.999774;DP=3085;DP4=1658,1344,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=5.92523e-08;MQSB=0.00306648;RPB=0.887288;SGB=80.9724;VDB=0.330809;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.8:22166747 chr08:022166747 0 W/22166747-22166747 FN4130-S SNP T -> C AC=1;AN=182;BQB=0.686563;DP=4275;DP4=2835,1298,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=11;MQ0F=0.58152;MQB=0.0119655;MQSB=7.38336e-40;RPB=0.252717;SGB=53.1331;VDB=0.329782;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F126L|1366|LOC_Os08g35170|protein_coding|CODING|LOC_Os08g35170.1|2|1) FN687-S.SNP.8:22183166 chr08:022183166 0 W/22183166-22183166 FN687-S Single Base Substitution C-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN4231-S.SNP.8:22186080 chr08:022186080 0 W/22186080-22186080 FN4231-S SNP C -> T AC=2;AN=170;BQB=0.909899;DP=2275;DP4=1001,1184,11,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.70534e-14;MQSB=0.999917;RPB=0.558827;SGB=86.5178;VDB=0.019435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.8:22196183 chr08:022196183 0 W/22196183-22196183 FN3316-S SNP C -> T AC=1;AN=184;BQB=0.649416;DP=3541;DP4=1551,1834,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.70097e-05;MQSB=0.000114796;RPB=0.583642;SGB=18.1394;VDB=0.585032;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.8:22197560 chr08:022197560 0 W/22197560-22197560 FN4049-S SNP A -> G AC=1;AN=168;BQB=0.647759;DP=2613;DP4=1337,1196,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.02854e-07;MQSB=0.590408;RPB=0.350986;SGB=2.75988;VDB=0.155031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.8:22202680 chr08:022202680 0 W/22202680-22202680 FN1320-S Single Base Substitution G-T INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2305.SNP.8:22202817 chr08:022202817 0 W/22202817-22202817 FN2305 SNP C -> T AC=1;AN=192;BQB=0.505889;DP=3657;DP4=1833,1398,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.97481e-06;MQSB=0.576135;RPB=0.502293;SGB=50.4731;VDB=0.549895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1461-S.SNP.8:22215911 chr08:022215911 0 W/22215911-22215911 FN1461-S Single Base Substitution A-T INTRON HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2596-S.SNP.8:22227856 chr08:022227856 0 W/22227856-22227856 FN2596-S SNP A -> T AC=1;AN=198;BQB=0.977695;DP=4391;DP4=2180,1875,18,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.75733e-16;MQSB=0.778867;RPB=0.989491;SGB=52.7004;VDB=0.169694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.8:22232824 chr08:022232824 0 W/22232824-22232824 FN3841-S SNP A -> G AC=1;AN=190;BQB=0.784568;DP=2512;DP4=1207,1220,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.95598e-09;MQSB=0.943598;RPB=0.999998;SGB=46.7622;VDB=0.755158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.8:22233290 chr08:022233290 0 W/22233290-22233290 FN2685-S SNP A -> T AC=2;AN=200;BQB=0.153354;DP=4913;DP4=2328,2364,17,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.93006e-19;MQSB=0.991125;RPB=0.859661;SGB=112.373;VDB=0.903294;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.8:22233989 chr08:022233989 0 W/22233989-22233989 FN-185 Single Base Substitution T-C INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1452-S.SNP.8:22234755 chr08:022234755 0 W/22234755-22234755 FN1452-S Single Base Substitution C-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN909-S.SNP.8:22242183 chr08:022242183 0 W/22242183-22242183 FN909-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g35250 transposon protein, putative, CACTA, En/Spm sub-class SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2286.SNP.8:22242275 chr08:022242275 0 W/22242275-22242275 FN2286 SNP C -> A AC=1;AN=192;BQB=0.242825;DP=4603;DP4=2204,2144,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021725;MQB=1.22466e-12;MQSB=0.248642;RPB=0.807712;SGB=-37.5061;VDB=0.423921;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q116K|479|LOC_Os08g35250|protein_coding|CODING|LOC_Os08g35250.1|1|1) FN4176-S.SNP.8:22243683 chr08:022243683 0 W/22243683-22243683 FN4176-S SNP A -> T AC=1;AN=170;BQB=0.816994;DP=2441;DP4=1075,1232,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00532569;MQB=0.000111983;MQSB=0.599711;RPB=0.502101;SGB=43.4296;VDB=0.780124;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y319F|479|LOC_Os08g35250|protein_coding|CODING|LOC_Os08g35250.1|2|1) FN2166-S.SNP.8:22247717 chr08:022247717 0 W/22247717-22247717 FN2166-S SNP A -> T AC=1;AN=168;BQB=0.00103996;DP=4225;DP4=1869,2314,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54674e-07;MQSB=0.977992;RPB=0.969735;SGB=-98.0622;VDB=0.119673;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.8:22247719 chr08:022247719 0 W/22247719-22247719 FN2166-S SNP G -> T AC=1;AN=168;BQB=0.00565644;DP=4225;DP4=1863,2319,8,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0479e-09;MQSB=0.991989;RPB=0.9145;SGB=-130.056;VDB=0.0216123;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.8:22279129 chr08:022279129 0 W/22279129-22279129 FN4153-S SNP C -> A AC=1;AN=170;BQB=0.981898;DP=2864;DP4=1496,1299,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.02441e-06;MQSB=0.938837;RPB=0.700742;SGB=34.5445;VDB=0.989471;EFF=INTRON(MODIFIER||||346|LOC_Os08g35310|protein_coding|CODING|LOC_Os08g35310.1|2|1) FN4107-S.SNP.8:22280432 chr08:022280432 0 W/22280432-22280432 FN4107-S SNP A -> C AC=1;AN=182;BQB=0.902394;DP=2506;DP4=1218,1202,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000399042;MQB=2.12955e-05;MQSB=0.960493;RPB=0.875253;SGB=39.6007;VDB=0.412662;EFF=INTERGENIC(MODIFIER||||||||||1) 707-2.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-2 Single Base Substitution G-A INTERGENIC HET SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. 707-3.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-3 Single Base Substitution G-A INTERGENIC HET SNo: 1471, Mutant_ID: 707-3, Generation: M2, Mutations: 34, Genes: 31, Seed availability: Yes. 707-4.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-4 Single Base Substitution G-A INTERGENIC Homo SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. 707-5.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-5 Single Base Substitution G-A INTERGENIC Homo SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. 707-6.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. 707-7.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 707-7 Single Base Substitution G-A INTERGENIC HET SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN1297-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN1297-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1615-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN1615-S Single Base Substitution G-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2201-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN2201-S SNP G -> A AC=2;AN=190;BQB=0.712306;DP=3563;DP4=1814,1349,19,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.80255e-13;MQSB=0.664811;RPB=0.714842;SGB=89.4087;VDB=0.464951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN2449 SNP G -> A AC=2;AN=200;BQB=0.565432;DP=3988;DP4=2189,1493,19,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.53383e-14;MQSB=0.363686;RPB=0.999965;SGB=101.557;VDB=0.121624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN3358-S SNP G -> A AC=1;AN=184;BQB=0.860732;DP=3259;DP4=1773,1362,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.52669e-06;MQSB=0.96055;RPB=0.764477;SGB=28.7043;VDB=0.78834;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN3806-S SNP G -> A AC=2;AN=190;BQB=0.761658;DP=2585;DP4=1452,995,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01681e-11;MQSB=0.921701;RPB=0.990908;SGB=82.301;VDB=0.861286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN3955-S SNP G -> A AC=1;AN=168;BQB=0.99245;DP=2252;DP4=1187,943,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44406e-05;MQSB=0.999911;RPB=0.638991;SGB=38.8805;VDB=0.819406;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN4314-S SNP G -> A AC=2;AN=170;BQB=0.952219;DP=2472;DP4=1377,969,19,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.48131e-15;MQSB=0.948131;RPB=0.96554;SGB=123.397;VDB=0.150263;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN469-S Single Base Substitution G-A INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN780-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN780-S Single Base Substitution G-A INTERGENIC HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN853-S Single Base Substitution G-A INTERGENIC HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.8:22283208 chr08:022283208 0 W/22283208-22283208 FN908-S Single Base Substitution G-A INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN-382.SNP.8:22283469 chr08:022283469 0 W/22283469-22283469 FN-382 Single Base Substitution C-T INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN2706-S.SNP.8:22284208 chr08:022284208 0 W/22284208-22284208 FN2706-S SNP C -> G AC=2;AN=200;BQB=0.544758;DP=4754;DP4=2361,2096,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.33319e-23;MQSB=0.889872;RPB=0.846175;SGB=137.609;VDB=0.905102;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.8:22288846 chr08:022288846 0 W/22288846-22288846 FN622-S Single Base Substitution C-T INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-129.SNP.8:22289893 chr08:022289893 0 W/22289893-22289893 FN-129 Single Base Substitution G-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2583-S.SNP.8:22292760 chr08:022292760 0 W/22292760-22292760 FN2583-S SNP T -> G AC=1;AN=200;BQB=0.49601;DP=4229;DP4=2144,1833,11,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07768e-18;MQSB=0.902482;RPB=0.438819;SGB=105.163;VDB=0.434718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.8:22296900 chr08:022296900 0 W/22296900-22296900 FN2375 SNP C -> T AC=1;AN=192;BQB=0.957899;DP=4878;DP4=2361,1901,13,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.83025e-07;MQSB=0.593022;RPB=0.967439;SGB=-57.3226;VDB=0.850428;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.8:22297841 chr08:022297841 0 W/22297841-22297841 FN-170 Single Base Substitution T-G INTRON HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN4143-S.SNP.8:22297841 chr08:022297841 0 W/22297841-22297841 FN4143-S SNP T -> G AC=1;AN=170;BQB=0.999797;DP=2542;DP4=1138,1243,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.242e-06;MQSB=0.714624;RPB=0.941361;SGB=27.9928;VDB=0.672885;EFF=INTRON(MODIFIER||||687|LOC_Os08g35370|protein_coding|CODING|LOC_Os08g35370.1|4|1) FN1641-S.SNP.8:22302187 chr08:022302187 0 W/22302187-22302187 FN1641-S Single Base Substitution A-G INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3423-S.SNP.8:22305728 chr08:022305728 0 W/22305728-22305728 FN3423-S SNP C -> T AC=2;AN=184;BQB=0.965244;DP=3795;DP4=1821,1842,22,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00158103;MQB=3.54242e-17;MQSB=0.477608;RPB=0.746444;SGB=166.309;VDB=0.664207;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.8:22309031 chr08:022309031 0 W/22309031-22309031 FN-149 Single Base Substitution T-A INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN3830-S.SNP.8:22309112 chr08:022309112 0 W/22309112-22309112 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.878037;DP=2838;DP4=1523,1237,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0560254;MQB=0.596006;MQSB=1.94092e-20;RPB=0.597102;SGB=49.0954;VDB=0.532753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.8:22310949 chr08:022310949 0 W/22310949-22310949 FN3811-S SNP A -> T AC=1;AN=190;BQB=0.888362;DP=3031;DP4=1405,1506,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0273837;MQB=0.344719;MQSB=4.73141e-05;RPB=0.502999;SGB=71.6393;VDB=0.407246;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S1323T|1827|LOC_Os08g35390|protein_coding|CODING|LOC_Os08g35390.1|2|1) FN-223.SNP.8:22311258 chr08:022311258 0 W/22311258-22311258 FN-223 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g35390 retrotransposon protein, putative, unclassified, expressed SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2146-S.SNP.8:22312356 chr08:022312356 0 W/22312356-22312356 FN2146-S SNP C -> A AC=2;AN=168;BQB=0.993617;DP=1940;DP4=811,1077,7,11;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.0221649;MQB=0.489069;MQSB=4.35479e-18;RPB=0.794339;SGB=29.4772;VDB=0.737968;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G854*|1827|LOC_Os08g35390|protein_coding|CODING|LOC_Os08g35390.1|2|1);LOF=(LOC_Os08g35390|LOC_Os08g35390|1|1.00);NMD=(LOC_Os08g35390|LOC_Os08g35390|1|1.00) FN-29.SNP.8:22313713 chr08:022313713 0 W/22313713-22313713 FN-29 Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os08g35390 retrotransposon protein, putative, unclassified, expressed SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN2546-S.SNP.8:22318547 chr08:022318547 0 W/22318547-22318547 FN2546-S SNP G -> T AC=1;AN=198;BQB=0.909545;DP=4272;DP4=2092,1910,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.51268e-07;MQSB=0.994422;RPB=0.906897;SGB=44.9538;VDB=0.1289;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.8:22336292 chr08:022336292 0 W/22336292-22336292 FN343-S Single Base Substitution C-G INTERGENIC HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN1190-S.SNP.8:22337643 chr08:022337643 0 W/22337643-22337643 FN1190-S Single Base Substitution A-T INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN484-S.SNP.8:22360306 chr08:022360306 0 W/22360306-22360306 FN484-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g35480 cupin superfamily protein, putative, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN1124-S.SNP.8:22362782 chr08:022362782 0 W/22362782-22362782 FN1124-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g35490 ctr copper transporter family protein, putative, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3818-S.SNP.8:22368252 chr08:022368252 0 W/22368252-22368252 FN3818-S SNP T -> A AC=1;AN=190;BQB=0.860813;DP=2895;DP4=1331,1413,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37721e-07;MQSB=0.989214;RPB=0.985296;SGB=71.8647;VDB=0.375242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.8:22369638 chr08:022369638 0 W/22369638-22369638 FN1455-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2229-S.SNP.8:22379708 chr08:022379708 0 W/22379708-22379708 FN2229-S SNP G -> C AC=2;AN=190;BQB=0.835387;DP=5012;DP4=2251,2287,36,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.73596e-37;MQSB=0.984672;RPB=0.951935;SGB=12.8102;VDB=0.421883;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.8:22383907 chr08:022383907 0 W/22383907-22383907 FN1448-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. W42-1-3S-1.SNP.8:22384296 chr08:022384296 0 W/22384296-22384296 W42-1-3S-1 Single Base Substitution G-C INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN555-S.SNP.8:22387535 chr08:022387535 0 W/22387535-22387535 FN555-S Single Base Substitution A-T INTRON HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2452.SNP.8:22391725 chr08:022391725 0 W/22391725-22391725 FN2452 SNP C -> A AC=1;AN=200;BQB=0.683053;DP=2250;DP4=957,1064,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000444444;MQB=1.45514e-05;MQSB=0.845644;RPB=0.195829;SGB=31.2392;VDB=0.369149;EFF=INTERGENIC(MODIFIER||||||||||1) FN1411-S.SNP.8:22402506 chr08:022402506 0 W/22402506-22402506 FN1411-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN2564-S.SNP.8:22405323 chr08:022405323 0 W/22405323-22405323 FN2564-S SNP T -> A AC=1;AN=198;BQB=0.831533;DP=4197;DP4=2044,2008,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.44698e-06;MQSB=0.976062;RPB=0.678726;SGB=13.7737;VDB=0.324876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.8:22406529 chr08:022406529 0 W/22406529-22406529 FN2475 SNP T -> C AC=1;AN=200;BQB=0.998381;DP=3879;DP4=1823,1566,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26981e-09;MQSB=0.387224;RPB=0.430413;SGB=-36.1052;VDB=0.339588;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.8:22408872 chr08:022408872 0 W/22408872-22408872 FN-232 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3930-S.SNP.8:22410054 chr08:022410054 0 W/22410054-22410054 FN3930-S SNP A -> T AC=1;AN=158;BQB=0.942261;DP=2478;DP4=1262,1131,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.69308e-10;MQSB=0.53765;RPB=0.98828;SGB=68.9144;VDB=0.177766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.8:22414679 chr08:022414679 0 W/22414679-22414679 FN2645-S SNP G -> T AC=2;AN=200;BQB=0.923543;DP=4375;DP4=1921,2137,34,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.01441e-39;MQSB=0.985777;RPB=0.23015;SGB=279.777;VDB=0.602671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V75L|153|LOC_Os08g35590|protein_coding|CODING|LOC_Os08g35590.1|1|1) FN1369-S.SNP.8:22414984 chr08:022414984 0 W/22414984-22414984 FN1369-S Single Base Substitution T-A UTR_3_PRIME Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3790-S.SNP.8:22420803 chr08:022420803 0 W/22420803-22420803 FN3790-S SNP A -> C AC=2;AN=190;BQB=0.84588;DP=2791;DP4=1364,1315,24,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.8733e-22;MQSB=0.922458;RPB=0.994113;SGB=180.22;VDB=0.955801;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.8:22421665 chr08:022421665 0 W/22421665-22421665 FN982-S Single Base Substitution T-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2401.SNP.8:22424079 chr08:022424079 0 W/22424079-22424079 FN2401 SNP G -> C AC=1;AN=200;BQB=0.284554;DP=3634;DP4=1772,1381,13,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000275179;MQB=4.92001e-08;MQSB=0.000730189;RPB=0.996733;SGB=17.5158;VDB=0.639907;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A8|294|LOC_Os08g35610|protein_coding|CODING|LOC_Os08g35610.1|1|1) FN3316-S.SNP.8:22434053 chr08:022434053 0 W/22434053-22434053 FN3316-S SNP T -> A AC=1;AN=184;BQB=0.970217;DP=3073;DP4=1503,1465,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.87077e-07;MQSB=0.995666;RPB=0.320385;SGB=10.6662;VDB=0.350064;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.8:22435969 chr08:022435969 0 W/22435969-22435969 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.504387;DP=3129;DP4=1575,1457,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61236e-10;MQSB=0.899354;RPB=0.569335;SGB=43.2083;VDB=0.82666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.8:22435972 chr08:022435972 0 W/22435972-22435972 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.843416;DP=3119;DP4=1528,1467,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.37815e-11;MQSB=0.961101;RPB=0.653936;SGB=46.7622;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.8:22442730 chr08:022442730 0 W/22442730-22442730 FN2362 SNP G -> A AC=1;AN=192;BQB=0.026532;DP=4859;DP4=1963,2582,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.43924e-10;MQSB=0.0511466;RPB=0.9609;SGB=15.1765;VDB=0.707516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.8:22451583 chr08:022451583 0 W/22451583-22451583 FN3687-S SNP T -> C AC=2;AN=190;BQB=0.46881;DP=2273;DP4=715,1307,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.98426e-12;MQSB=0.323563;RPB=0.552737;SGB=-67.5498;VDB=0.145928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.8:22451761 chr08:022451761 0 W/22451761-22451761 FN2370 SNP A -> T AC=1;AN=192;BQB=0.476029;DP=5139;DP4=3007,1693,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000972952;MQB=5.78698e-06;MQSB=0.178471;RPB=0.99827;SGB=16.0922;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.8:22456043 chr08:022456043 0 W/22456043-22456043 FN3537-S SNP T -> A AC=1;AN=188;BQB=0.995241;DP=2610;DP4=1350,1162,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.93753e-08;MQSB=0.977717;RPB=0.987776;SGB=48.979;VDB=0.781161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.8:22457172 chr08:022457172 0 W/22457172-22457172 FN1212-S Single Base Substitution C-T INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2495.SNP.8:22457180 chr08:022457180 0 W/22457180-22457180 FN2495 SNP T -> A AC=1;AN=200;BQB=0.589822;DP=4168;DP4=1982,1996,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.97498e-06;MQSB=0.181983;RPB=0.661174;SGB=19.0642;VDB=0.570086;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.8:22457180 chr08:022457180 0 W/22457180-22457180 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.877244;DP=3460;DP4=1943,1389,13,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.93024e-13;MQSB=0.998367;RPB=0.647616;SGB=78.0093;VDB=0.825073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.8:22463919 chr08:022463919 0 W/22463919-22463919 FN2659-S SNP G -> T AC=2;AN=200;BQB=0.998509;DP=5100;DP4=2474,2368,29,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.99416e-30;MQSB=0.948436;RPB=0.96229;SGB=136.297;VDB=0.746936;EFF=INTRON(MODIFIER||||232|LOC_Os08g35630|protein_coding|CODING|LOC_Os08g35630.1|1|1) FN2119-S.SNP.8:22466695 chr08:022466695 0 W/22466695-22466695 FN2119-S SNP C -> G AC=1;AN=168;BQB=0.995899;DP=3842;DP4=2084,1702,19,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.63314e-16;MQSB=0.981534;RPB=0.661247;SGB=-9.7719;VDB=0.255591;EFF=INTERGENIC(MODIFIER||||||||||1) FN693-S.SNP.8:22473195 chr08:022473195 0 W/22473195-22473195 FN693-S Single Base Substitution C-A INTERGENIC HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN3851-S.SNP.8:22475860 chr08:022475860 0 W/22475860-22475860 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.84825;DP=2671;DP4=1176,1399,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.02614e-06;MQSB=0.944059;RPB=0.790216;SGB=38.3284;VDB=0.877807;EFF=INTRON(MODIFIER||||485|LOC_Os08g35650|protein_coding|CODING|LOC_Os08g35650.1|5|1) FN2553-S.SNP.8:22481357 chr08:022481357 0 W/22481357-22481357 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.510934;DP=4074;DP4=2121,1762,10,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.15369e-08;MQSB=0.527751;RPB=0.12992;SGB=49.5489;VDB=0.0332879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.8:22482605 chr08:022482605 0 W/22482605-22482605 FN1209-S Single Base Substitution T-A INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN670-S.SNP.8:22483056 chr08:022483056 0 W/22483056-22483056 FN670-S Single Base Substitution T-A INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2320.SNP.8:22492807 chr08:022492807 0 W/22492807-22492807 FN2320 SNP G -> T AC=1;AN=192;BQB=0.286897;DP=5198;DP4=2408,2479,7,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.57863e-11;MQSB=0.762716;RPB=0.575886;SGB=81.1609;VDB=0.148798;EFF=UTR_3_PRIME(MODIFIER||148||614|LOC_Os08g35670|protein_coding|CODING|LOC_Os08g35670.1|5|1) FN2320.SNP.8:22492808 chr08:022492808 0 W/22492808-22492808 FN2320 SNP C -> T AC=1;AN=192;BQB=0.916197;DP=5197;DP4=2418,2394,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14913e-11;MQSB=0.955084;RPB=0.509235;SGB=15.1765;VDB=0.0182189;EFF=UTR_3_PRIME(MODIFIER||147||614|LOC_Os08g35670|protein_coding|CODING|LOC_Os08g35670.1|5|1) FN3748-S.SNP.8:22494370 chr08:022494370 0 W/22494370-22494370 FN3748-S SNP C -> A AC=1;AN=190;BQB=0.899939;DP=2742;DP4=1348,1258,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41108e-07;MQSB=0.939797;RPB=0.342543;SGB=23.6597;VDB=0.0940809;EFF=INTRON(MODIFIER||||614|LOC_Os08g35670|protein_coding|CODING|LOC_Os08g35670.1|4|1) FN3877-S.SNP.8:22496877 chr08:022496877 0 W/22496877-22496877 FN3877-S SNP G -> T AC=2;AN=158;BQB=0.978971;DP=2429;DP4=1162,1171,15,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.16505e-17;MQSB=0.999946;RPB=0.606708;SGB=134.456;VDB=0.23987;EFF=INTRON(MODIFIER||||614|LOC_Os08g35670|protein_coding|CODING|LOC_Os08g35670.1|1|1) FN2202-S.SNP.8:22499854 chr08:022499854 0 W/22499854-22499854 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.535865;DP=3757;DP4=1664,1691,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.95862e-12;MQSB=0.141391;RPB=0.957203;SGB=51.7524;VDB=0.516661;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.8:22503682 chr08:022503682 0 W/22503682-22503682 FN3475-S SNP T -> A AC=1;AN=184;BQB=0.997493;DP=3406;DP4=1974,1204,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.2661e-12;MQSB=0.535522;RPB=0.95577;SGB=40.9276;VDB=0.488476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.8:22505497 chr08:022505497 0 W/22505497-22505497 FN3819-S SNP G -> A AC=1;AN=190;BQB=0.999996;DP=2971;DP4=1421,1428,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.77385e-11;MQSB=0.991366;RPB=0.557546;SGB=50.3161;VDB=0.0730311;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.8:22509271 chr08:022509271 0 W/22509271-22509271 FN739-S Single Base Substitution T-G INTRON HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2380.SNP.8:22511656 chr08:022511656 0 W/22511656-22511656 FN2380 SNP T -> A AC=1;AN=192;BQB=0.620601;DP=5345;DP4=2671,2447,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.63255e-07;MQSB=0.0140368;RPB=0.682218;SGB=36.2157;VDB=0.741287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.8:22511862 chr08:022511862 0 W/22511862-22511862 FN1163-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1333-S.SNP.8:22515427 chr08:022515427 0 W/22515427-22515427 FN1333-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g35690 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3834-S.SNP.8:22518414 chr08:022518414 0 W/22518414-22518414 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.996819;DP=2721;DP4=1109,1534,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.185961;MQB=0.526293;MQSB=0.994385;RPB=0.969632;SGB=49.0954;VDB=0.888914;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V969|974|LOC_Os08g35690|protein_coding|CODING|LOC_Os08g35690.1|4|1) FN2711-S.SNP.8:22518838 chr08:022518838 0 W/22518838-22518838 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.625419;DP=5325;DP4=2613,2379,12,8;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0480751;MQB=0.985677;MQSB=0.253848;RPB=0.358019;SGB=12.7003;VDB=0.499379;EFF=INTRON(MODIFIER||||974|LOC_Os08g35690|protein_coding|CODING|LOC_Os08g35690.1|4|1) FN3974-S.SNP.8:22527259 chr08:022527259 0 W/22527259-22527259 FN3974-S SNP G -> A AC=1;AN=168;BQB=0.96155;DP=2555;DP4=1222,1237,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.04116e-07;MQSB=0.816045;RPB=0.0738794;SGB=24.4556;VDB=0.419414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S496L|901|LOC_Os08g35700|protein_coding|CODING|LOC_Os08g35700.1|1|1) FN1467-S.SNP.8:22527376 chr08:022527376 0 W/22527376-22527376 FN1467-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g35700 Leucine Rich Repeat family protein, expressed SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3788-S.SNP.8:22535836 chr08:022535836 0 W/22535836-22535836 FN3788-S SNP T -> C AC=1;AN=190;BQB=0.891908;DP=2649;DP4=1292,1279,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.11023e-07;MQSB=0.939264;RPB=0.474855;SGB=39.9877;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.8:22537506 chr08:022537506 0 W/22537506-22537506 FN4234-S SNP A -> T AC=1;AN=170;BQB=0.905101;DP=2646;DP4=1176,1416,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.08899e-07;MQSB=0.578731;RPB=0.994051;SGB=52.3148;VDB=0.441271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.8:22540138 chr08:022540138 0 W/22540138-22540138 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.193486;DP=4601;DP4=2278,2052,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.327972;MQB=0.860406;MQSB=0;RPB=0.193904;SGB=68.91;VDB=0.646183;EFF=INTRON(MODIFIER||||745|LOC_Os08g35720|protein_coding|CODING|LOC_Os08g35720.1|6|1) FN2373.SNP.8:22545448 chr08:022545448 0 W/22545448-22545448 FN2373 SNP A -> G AC=1;AN=192;BQB=0.555825;DP=5139;DP4=2373,2523,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.49058e-10;MQSB=0.962251;RPB=0.206438;SGB=85.7252;VDB=0.450479;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.8:22552128 chr08:022552128 0 W/22552128-22552128 FN2392 SNP T -> C AC=1;AN=200;BQB=0.995796;DP=4321;DP4=2076,1977,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.65507e-17;MQSB=0.486147;RPB=0.551177;SGB=97.9523;VDB=0.625631;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.8:22557637 chr08:022557637 0 W/22557637-22557637 FN2364 SNP G -> A AC=1;AN=192;BQB=0.672216;DP=5104;DP4=2359,2351,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.30058e-09;MQSB=0.560663;RPB=0.839625;SGB=-55.8869;VDB=0.454019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.8:22561780 chr08:022561780 0 W/22561780-22561780 FN1540-S Single Base Substitution A-G INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3558-S.SNP.8:22564335 chr08:022564335 0 W/22564335-22564335 FN3558-S SNP G -> T AC=2;AN=188;BQB=0.887234;DP=2759;DP4=1167,1474,10,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.44223e-17;MQSB=0.495906;RPB=0.357938;SGB=135.302;VDB=0.267705;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.8:22564339 chr08:022564339 0 W/22564339-22564339 FN3558-S SNP T -> A AC=2;AN=188;BQB=0.888923;DP=2717;DP4=1134,1478,9,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.47996e-18;MQSB=0.539434;RPB=0.448906;SGB=96.2203;VDB=0.188762;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.8:22564733 chr08:022564733 0 W/22564733-22564733 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.946887;DP=4920;DP4=2902,1670,17,4;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0727642;MQB=5.3216e-06;MQSB=4.57737e-25;RPB=0.559476;SGB=65.5058;VDB=0.151322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.8:22565528 chr08:022565528 0 W/22565528-22565528 FN1295-S Single Base Substitution G-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3766-S.SNP.8:22571843 chr08:022571843 0 W/22571843-22571843 FN3766-S SNP T -> G AC=1;AN=190;BQB=0.516034;DP=2088;DP4=745,1257,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00670498;MQB=0.00383862;MQSB=7.09046e-06;RPB=0.284917;SGB=10.8904;VDB=0.89913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.8:22579056 chr08:022579056 0 W/22579056-22579056 FN3626-S SNP A -> T AC=1;AN=190;BQB=0.125172;DP=1943;DP4=932,793,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0319094;MQB=0.510829;MQSB=5.86507e-08;RPB=0.114928;SGB=-3.65821;VDB=0.906563;EFF=INTRON(MODIFIER||||857|LOC_Os08g35800|protein_coding|CODING|LOC_Os08g35800.1|1|1) FN1237-S.SNP.8:22579590 chr08:022579590 0 W/22579590-22579590 FN1237-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN4151-S.SNP.8:22586564 chr08:022586564 0 W/22586564-22586564 FN4151-S SNP C -> T AC=2;AN=170;BQB=0.75028;DP=2127;DP4=992,1044,15,9;HOB=0.0232526;ICB=0.494188;MQ=23;MQ0F=0.299013;MQB=0.496024;MQSB=0.0078182;RPB=0.374631;SGB=101.184;VDB=0.0857274;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S338|1944|LOC_Os08g35810|protein_coding|CODING|LOC_Os08g35810.1|2|1) FN4145-S.SNP.8:22588670 chr08:022588670 0 W/22588670-22588670 FN4145-S SNP G -> T AC=2;AN=170;BQB=0.988308;DP=2306;DP4=950,1282,8,12;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0624458;MQB=0.0960683;MQSB=3.4052e-05;RPB=0.562823;SGB=83.4133;VDB=0.360248;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A83S|959|LOC_Os08g35820|protein_coding|CODING|LOC_Os08g35820.1|1|1) FN2125-S.SNP.8:22600892 chr08:022600892 0 W/22600892-22600892 FN2125-S SNP C -> T AC=1;AN=168;BQB=0.418708;DP=2620;DP4=1110,1475,4,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.8105e-09;MQSB=0.229635;RPB=0.255971;SGB=27.0464;VDB=0.273955;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.8:22603829 chr08:022603829 0 W/22603829-22603829 FN2091-S SNP C -> T AC=1;AN=168;BQB=0.374137;DP=3855;DP4=1752,2064,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.21377e-08;MQSB=0.82031;RPB=0.158384;SGB=-64.9298;VDB=0.535784;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.8:22607403 chr08:022607403 0 W/22607403-22607403 FN4253-S SNP C -> G AC=1;AN=170;BQB=0.99469;DP=2556;DP4=1271,996,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000782473;MQB=9.54678e-07;MQSB=0.83175;RPB=0.128575;SGB=-35.4263;VDB=0.201504;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.8:22610947 chr08:022610947 0 W/22610947-22610947 FN2327 SNP T -> C AC=1;AN=192;BQB=0.677001;DP=5087;DP4=2428,2380,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.29236e-06;MQSB=0.849198;RPB=0.909792;SGB=16.0922;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.8:22612676 chr08:022612676 0 W/22612676-22612676 FN4151-S SNP G -> A AC=2;AN=170;BQB=0.909899;DP=1915;DP4=1212,601,12,2;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.25636e-07;MQSB=0.551448;RPB=0.300661;SGB=56.7575;VDB=0.609276;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.8:22613818 chr08:022613818 0 W/22613818-22613818 FN764-S Single Base Substitution T-C INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1028-S.SNP.8:22625852 chr08:022625852 0 W/22625852-22625852 FN1028-S Single Base Substitution G-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN564-S.SNP.8:22637006 chr08:022637006 0 W/22637006-22637006 FN564-S Single Base Substitution A-T INTRON HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN4081-S.SNP.8:22643306 chr08:022643306 0 W/22643306-22643306 FN4081-S SNP C -> T AC=1;AN=182;BQB=0.991983;DP=2900;DP4=1398,1449,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.84219e-09;MQSB=0.5434;RPB=0.34151;SGB=62.1548;VDB=0.540901;EFF=INTRON(MODIFIER||||279|LOC_Os08g35900|protein_coding|CODING|LOC_Os08g35900.1|1|1),INTRON(MODIFIER||||279|LOC_Os08g35900|protein_coding|CODING|LOC_Os08g35900.2|1|1) FN3940-S.SNP.8:22648048 chr08:022648048 0 W/22648048-22648048 FN3940-S SNP T -> C AC=2;AN=158;BQB=0.884315;DP=2362;DP4=1124,1154,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.3865e-13;MQSB=0.85693;RPB=0.63136;SGB=86.3921;VDB=0.309719;EFF=INTRON(MODIFIER||||771|LOC_Os08g35910|protein_coding|CODING|LOC_Os08g35910.1|5|1) FN797-S.SNP.8:22648468 chr08:022648468 0 W/22648468-22648468 FN797-S Single Base Substitution A-G INTRON HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2429.SNP.8:22657743 chr08:022657743 0 W/22657743-22657743 FN2429 SNP T -> C AC=1;AN=200;BQB=0.176308;DP=4714;DP4=2196,2181,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212134;MQB=5.71538e-11;MQSB=0.923991;RPB=0.478332;SGB=58.2954;VDB=0.936378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E402G|432|LOC_Os08g35930|protein_coding|CODING|LOC_Os08g35930.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E402G|432|LOC_Os08g35930|protein_coding|CODING|LOC_Os08g35930.1|3|1) FN3383-S.SNP.8:22667869 chr08:022667869 0 W/22667869-22667869 FN3383-S SNP A -> T AC=1;AN=184;BQB=0.933936;DP=2967;DP4=1320,1567,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19083e-10;MQSB=0.809521;RPB=0.970176;SGB=11.3677;VDB=0.812382;EFF=INTRON(MODIFIER||||207|LOC_Os08g35939|protein_coding|CODING|LOC_Os08g35939.1|2|1) FN3383-S.SNP.8:22667871 chr08:022667871 0 W/22667871-22667871 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.998714;DP=2963;DP4=1321,1528,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.71232e-12;MQSB=0.840944;RPB=0.903522;SGB=56.8786;VDB=0.774604;EFF=INTRON(MODIFIER||||207|LOC_Os08g35939|protein_coding|CODING|LOC_Os08g35939.1|2|1) FN3354-S.SNP.8:22675202 chr08:022675202 0 W/22675202-22675202 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.926438;DP=3798;DP4=2342,1335,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35737e-10;MQSB=0.999953;RPB=0.928153;SGB=53.3568;VDB=0.894845;EFF=UTR_5_PRIME(MODIFIER||136||256|LOC_Os08g35948|protein_coding|CODING|LOC_Os08g35948.1|1|1),UTR_5_PRIME(MODIFIER||136||228|LOC_Os08g35948|protein_coding|CODING|LOC_Os08g35948.2|1|1) FN2119-S.SNP.8:22678324 chr08:022678324 0 W/22678324-22678324 FN2119-S SNP C -> A AC=1;AN=168;BQB=0.0420468;DP=3211;DP4=1255,1902,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.70223e-09;MQSB=0.99093;RPB=0.82686;SGB=-137.195;VDB=0.726614;EFF=INTRON(MODIFIER||||468|LOC_Os08g35960|protein_coding|CODING|LOC_Os08g35960.1|1|1),INTRON(MODIFIER||||440|LOC_Os08g35960|protein_coding|CODING|LOC_Os08g35960.2|1|1),INTRON(MODIFIER||||438|LOC_Os08g35960|protein_coding|CODING|LOC_Os08g35960.3|1|1) FN2431.SNP.8:22681457 chr08:022681457 0 W/22681457-22681457 FN2431 SNP T -> A AC=1;AN=200;BQB=0.741637;DP=4661;DP4=2381,1974,10,5;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0821712;MQB=0.172203;MQSB=0.986634;RPB=0.873778;SGB=24.2746;VDB=0.97392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F469Y|942|LOC_Os08g35970|protein_coding|CODING|LOC_Os08g35970.1|1|1) FN2431.SNP.8:22681458 chr08:022681458 0 W/22681458-22681458 FN2431 SNP C -> A AC=1;AN=200;BQB=0.340818;DP=4659;DP4=2427,1972,10,7;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.0871432;MQB=0.107423;MQSB=0.927808;RPB=0.40813;SGB=-13.7154;VDB=0.973511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F469L|942|LOC_Os08g35970|protein_coding|CODING|LOC_Os08g35970.1|1|1) FN2185-S.SNP.8:22684254 chr08:022684254 0 W/22684254-22684254 FN2185-S SNP C -> G AC=1;AN=190;BQB=0.983;DP=4062;DP4=1795,2037,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0413589;MQB=0.184164;MQSB=0.00106182;RPB=0.866886;SGB=71.6393;VDB=0.83723;EFF=INTRON(MODIFIER||||202|LOC_Os08g35980|protein_coding|CODING|LOC_Os08g35980.1|1|1) FN2083-S.SNP.8:22686612 chr08:022686612 0 W/22686612-22686612 FN2083-S SNP C -> T AC=2;AN=168;BQB=0.841689;DP=2821;DP4=1797,934,25,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.86408e-20;MQSB=0.847178;RPB=0.992417;SGB=-4.6021;VDB=0.803623;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.8:22697457 chr08:022697457 0 W/22697457-22697457 FN4070-S SNP C -> A AC=1;AN=182;BQB=0.740377;DP=3424;DP4=1601,1698,15,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.44155e-13;MQSB=0.850358;RPB=0.985337;SGB=125.307;VDB=0.317058;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN-143 Single Base Substitution G-A INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-227.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN-227 Single Base Substitution G-A INTERGENIC HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN2373.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN2373 SNP G -> A AC=1;AN=192;BQB=0.1139;DP=5029;DP4=2431,2284,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.23882e-13;MQSB=0.787771;RPB=0.788538;SGB=16.7409;VDB=0.555188;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN3550-S SNP G -> A AC=1;AN=188;BQB=0.975646;DP=2684;DP4=1472,1142,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.09476e-07;MQSB=0.9963;RPB=0.0703182;SGB=25.3545;VDB=0.219282;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN545-S Single Base Substitution G-A INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN898-S.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN898-S Single Base Substitution G-A INTERGENIC HOMO SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN977-S.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 FN977-S Single Base Substitution G-A INTERGENIC HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. W426-1-1.SNP.8:22701182 chr08:022701182 0 W/22701182-22701182 W426-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3442-S.SNP.8:22702241 chr08:022702241 0 W/22702241-22702241 FN3442-S SNP C -> T AC=2;AN=184;BQB=0.929902;DP=2679;DP4=1197,1362,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.96156e-13;MQSB=0.902991;RPB=0.939546;SGB=98.4821;VDB=0.993252;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A28|397|LOC_Os08g36020|protein_coding|CODING|LOC_Os08g36020.1|1|1) FN-255.SNP.8:22711627 chr08:022711627 0 W/22711627-22711627 FN-255 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g36030 plant viral response family protein, putative, expressed SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN3383-S.SNP.8:22721688 chr08:022721688 0 W/22721688-22721688 FN3383-S SNP G -> C AC=1;AN=184;BQB=0.999201;DP=3409;DP4=1222,2060,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00586682;MQB=0.468272;MQSB=0.000152903;RPB=0.993511;SGB=60.4004;VDB=0.350976;EFF=UTR_3_PRIME(MODIFIER||148||98|LOC_Os08g36060|protein_coding|CODING|LOC_Os08g36060.1|1|1) W427-1-1.SNP.8:22724850 chr08:022724850 0 W/22724850-22724850 W427-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-284.SNP.8:22725266 chr08:022725266 0 W/22725266-22725266 FN-284 Single Base Substitution A-G INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN-235.SNP.8:22736485 chr08:022736485 0 W/22736485-22736485 FN-235 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3631-S.SNP.8:22739455 chr08:022739455 0 W/22739455-22739455 FN3631-S SNP G -> A AC=1;AN=190;BQB=0.983457;DP=2543;DP4=1438,1032,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8283e-06;MQSB=0.375232;RPB=0.421365;SGB=35.4339;VDB=0.145385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.8:22739456 chr08:022739456 0 W/22739456-22739456 FN3631-S SNP C -> A AC=1;AN=190;BQB=0.97067;DP=2538;DP4=1428,1016,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.99428e-06;MQSB=0.331213;RPB=0.401818;SGB=35.4339;VDB=0.162778;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.8:22740732 chr08:022740732 0 W/22740732-22740732 FN4178-S SNP T -> A AC=2;AN=170;BQB=0.97933;DP=1890;DP4=936,901,11,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.38675e-12;MQSB=0.982457;RPB=0.9995;SGB=55.5339;VDB=0.628719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.8:22745631 chr08:022745631 0 W/22745631-22745631 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.234455;DP=4281;DP4=2066,1967,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023359;MQB=4.326e-06;MQSB=0.701005;RPB=0.932257;SGB=54.2646;VDB=0.903987;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C17|80|LOC_Os08g36090|protein_coding|CODING|LOC_Os08g36090.1|1|1) FN1035-S.SNP.8:22746941 chr08:022746941 0 W/22746941-22746941 FN1035-S Single Base Substitution G-A INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. W463-2-1.SNP.8:22747290 chr08:022747290 0 W/22747290-22747290 W463-2-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN4047-S.SNP.8:22748765 chr08:022748765 0 W/22748765-22748765 FN4047-S SNP A -> C AC=1;AN=168;BQB=0.535138;DP=2921;DP4=1479,1290,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.57933e-05;MQSB=0.433543;RPB=0.909983;SGB=12.4615;VDB=0.212183;EFF=INTRON(MODIFIER||||299|LOC_Os08g36100|protein_coding|CODING|LOC_Os08g36100.1|1|1) 701-3.SNP.8:22750548 chr08:022750548 0 W/22750548-22750548 701-3 Single Base Substitution T-A INTRON HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN1026-S.SNP.8:22757082 chr08:022757082 0 W/22757082-22757082 FN1026-S Single Base Substitution T-C INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN4020-S.SNP.8:22763808 chr08:022763808 0 W/22763808-22763808 FN4020-S SNP T -> G AC=2;AN=168;BQB=0.99352;DP=2964;DP4=1494,1295,30,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.55022e-29;MQSB=0.891872;RPB=0.895155;SGB=172.452;VDB=0.150937;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R1096|1384|LOC_Os08g36130|protein_coding|CODING|LOC_Os08g36130.1|4|1) FN3398-S.SNP.8:22768890 chr08:022768890 0 W/22768890-22768890 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.994586;DP=2882;DP4=1525,1284,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.57652e-08;MQSB=0.971872;RPB=0.717764;SGB=39.2697;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.8:22770778 chr08:022770778 0 W/22770778-22770778 FN3915-S SNP G -> A AC=1;AN=158;BQB=0.89898;DP=2046;DP4=1038,935,3,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.00082297;MQSB=0.93842;RPB=0.632161;SGB=20.8534;VDB=0.143887;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.8:22771391 chr08:022771391 0 W/22771391-22771391 FN-199 Single Base Substitution T-A INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2329.SNP.8:22775138 chr08:022775138 0 W/22775138-22775138 FN2329 SNP C -> T AC=1;AN=192;BQB=0.795834;DP=5170;DP4=2464,2394,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.28517e-16;MQSB=0.996842;RPB=0.597106;SGB=89.6809;VDB=0.0827609;EFF=UTR_3_PRIME(MODIFIER||249||187|LOC_Os08g36140|protein_coding|CODING|LOC_Os08g36140.1|5|1) FN3859-S.SNP.8:22788510 chr08:022788510 0 W/22788510-22788510 FN3859-S SNP G -> A AC=1;AN=158;BQB=0.903108;DP=2814;DP4=1397,1327,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.79854e-07;MQSB=0.760493;RPB=0.939892;SGB=40.8124;VDB=0.884271;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V819I|948|LOC_Os08g36160|protein_coding|CODING|LOC_Os08g36160.1|6|1),SPLICE_SITE_REGION(LOW||||948|LOC_Os08g36160|protein_coding|CODING|LOC_Os08g36160.1|6|1) FN1550-S.SNP.8:22788871 chr08:022788871 0 W/22788871-22788871 FN1550-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g36160 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN3982-S.SNP.8:22790622 chr08:022790622 0 W/22790622-22790622 FN3982-S SNP C -> T AC=1;AN=168;BQB=0.861327;DP=1574;DP4=902,612,5,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000323571;MQSB=0.999997;RPB=0.949696;SGB=25.5891;VDB=0.705301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.8:22802315 chr08:022802315 0 W/22802315-22802315 FN2330 SNP C -> A AC=2;AN=192;BQB=0.042046;DP=4465;DP4=2175,1980,13,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.96672e-14;MQSB=5.14243e-06;RPB=0.335852;SGB=125.324;VDB=0.160169;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN-157 Single Base Substitution C-T INTRON HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-198.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN-198 Single Base Substitution C-T INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN1109-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN1109-S Single Base Substitution C-T INTRON HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1205-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN1205-S Single Base Substitution C-T INTRON HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1214-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN1214-S Single Base Substitution C-T INTRON HOMO SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1406-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN1406-S Single Base Substitution C-T INTRON HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN2266-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN2266-S SNP C -> T AC=2;AN=190;BQB=0.999544;DP=4895;DP4=2353,2200,15,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00551583;MQB=3.6482e-08;MQSB=0.0615331;RPB=0.451363;SGB=59.414;VDB=0.98198;EFF=INTRON(MODIFIER||||311|LOC_Os08g36170|protein_coding|CODING|LOC_Os08g36170.1|1|1) FN2556-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.281876;DP=4329;DP4=2177,1923,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00600601;MQB=1.45212e-06;MQSB=0.11055;RPB=0.905599;SGB=47.5102;VDB=0.503574;EFF=INTRON(MODIFIER||||311|LOC_Os08g36170|protein_coding|CODING|LOC_Os08g36170.1|1|1) FN3322-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN3322-S SNP C -> T AC=2;AN=184;BQB=0.972135;DP=2900;DP4=1460,1308,9,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00758621;MQB=0.000143129;MQSB=0.421913;RPB=0.809795;SGB=12.8895;VDB=0.95557;EFF=INTRON(MODIFIER||||311|LOC_Os08g36170|protein_coding|CODING|LOC_Os08g36170.1|1|1) FN4145-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN4145-S SNP C -> T AC=2;AN=170;BQB=0.998895;DP=2434;DP4=1276,1063,14,22;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00903862;MQB=4.10666e-08;MQSB=0.257267;RPB=0.940799;SGB=114.059;VDB=0.702218;EFF=INTRON(MODIFIER||||311|LOC_Os08g36170|protein_coding|CODING|LOC_Os08g36170.1|1|1) FN818-S.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN818-S Single Base Substitution C-T INTRON HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN_786-4-1.SNP.8:22811119 chr08:022811119 0 W/22811119-22811119 FN_786-4-1 Single Base Substitution C-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-412.SNP.8:22817889 chr08:022817889 0 W/22817889-22817889 FN-412 Single Base Substitution A-G INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN412-S.SNP.8:22817889 chr08:022817889 0 W/22817889-22817889 FN412-S Single Base Substitution A-G INTERGENIC HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3308-S.SNP.8:22834324 chr08:022834324 0 W/22834324-22834324 FN3308-S SNP T -> A AC=1;AN=184;BQB=0.980247;DP=3012;DP4=1431,1470,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30209e-07;MQSB=0.999545;RPB=0.903011;SGB=25.1826;VDB=0.812497;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.8:22846911 chr08:022846911 0 W/22846911-22846911 FN2233-S SNP G -> A AC=1;AN=190;BQB=0.560953;DP=3093;DP4=1553,1331,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000323311;MQB=0.00177283;MQSB=0.19701;RPB=0.625799;SGB=30.8803;VDB=0.677026;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.8:22864186 chr08:022864186 0 W/22864186-22864186 FN440-S Single Base Substitution C-T INTERGENIC HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN3964-S.SNP.8:22884298 chr08:022884298 0 W/22884298-22884298 FN3964-S SNP T -> A AC=2;AN=168;BQB=0.924372;DP=2947;DP4=1555,1279,23,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000339328;MQB=4.52457e-18;MQSB=0.984566;RPB=0.729323;SGB=68.3702;VDB=0.20776;EFF=INTERGENIC(MODIFIER||||||||||1) 701-1.SNP.8:22887084 chr08:022887084 0 W/22887084-22887084 701-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN950-S.SNP.8:22890936 chr08:022890936 0 W/22890936-22890936 FN950-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g36330 POLE2B - Putative DNA polymerase epsilon complex subunit, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1467-S.SNP.8:22892709 chr08:022892709 0 W/22892709-22892709 FN1467-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1711-S.SNP.8:22895222 chr08:022895222 0 W/22895222-22895222 FN1711-S SNP T -> C AC=1;AN=188;BQB=8.3456e-05;DP=2734;DP4=1009,1645,8,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00168292;MQSB=0.152876;RPB=0.0348018;SGB=-192.795;VDB=0.0252011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.8:22895891 chr08:022895891 0 W/22895891-22895891 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.96433;DP=2487;DP4=755,1409,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000804182;MQB=6.93362e-06;MQSB=0.207687;RPB=0.89429;SGB=14.3409;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.8:22897466 chr08:022897466 0 W/22897466-22897466 FN1221-S Single Base Substitution C-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN4039-S.SNP.8:22901525 chr08:022901525 0 W/22901525-22901525 FN4039-S SNP A -> G AC=1;AN=168;BQB=0.967358;DP=2240;DP4=925,1191,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.74511e-08;MQSB=0.926585;RPB=0.741799;SGB=24.6155;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.8:22902542 chr08:022902542 0 W/22902542-22902542 FN2339 SNP G -> A AC=1;AN=192;BQB=0.773995;DP=4899;DP4=2210,2402,5,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.50594e-10;MQSB=0.968351;RPB=0.579374;SGB=50.4731;VDB=0.722021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.8:22902793 chr08:022902793 0 W/22902793-22902793 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1332-S.SNP.8:22916444 chr08:022916444 0 W/22916444-22916444 FN1332-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3550-S.SNP.8:22930488 chr08:022930488 0 W/22930488-22930488 FN3550-S SNP T -> A AC=1;AN=188;BQB=0.402602;DP=3166;DP4=1521,1353,12,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.08013e-11;MQSB=0.961099;RPB=0.0455687;SGB=-135.175;VDB=0.597507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N95I|295|LOC_Os08g36380|protein_coding|CODING|LOC_Os08g36380.1|3|1) FN-246.SNP.8:22935189 chr08:022935189 0 W/22935189-22935189 FN-246 Single Base Substitution A-G INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3546-S.SNP.8:22942281 chr08:022942281 0 W/22942281-22942281 FN3546-S SNP A -> C AC=2;AN=188;BQB=0.917373;DP=2437;DP4=1034,1281,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.25972e-08;MQSB=0.912333;RPB=0.677928;SGB=57.244;VDB=0.352025;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.8:22946403 chr08:022946403 0 W/22946403-22946403 FN-210 Single Base Substitution C-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN-70.SNP.8:22951283 chr08:022951283 0 W/22951283-22951283 FN-70 Single Base Substitution C-T INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2331.SNP.8:22951601 chr08:022951601 0 W/22951601-22951601 FN2331 SNP C -> T AC=1;AN=192;BQB=0.656729;DP=4882;DP4=2028,2548,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.29058e-06;MQSB=0.570907;RPB=0.621864;SGB=29.087;VDB=0.946352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.8:22955857 chr08:022955857 0 W/22955857-22955857 FN2376 SNP C -> A AC=1;AN=192;BQB=0.816649;DP=5167;DP4=2304,2456,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.92984e-18;MQSB=0.618422;RPB=0.655123;SGB=-40.9913;VDB=0.356819;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.8:22960217 chr08:022960217 0 W/22960217-22960217 FN_807-3-1 Single Base Substitution C-A HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1693-S.SNP.8:22962738 chr08:022962738 0 W/22962738-22962738 FN1693-S SNP T -> A AC=1;AN=188;BQB=0.0354336;DP=2074;DP4=1081,962,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0;MQB=0.470059;MQSB=3.58106e-05;RPB=0.600408;SGB=-35.9944;VDB=0.521201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.8:22969480 chr08:022969480 0 W/22969480-22969480 FN1262-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3477-S.SNP.8:22982312 chr08:022982312 0 W/22982312-22982312 FN3477-S SNP C -> G AC=2;AN=184;BQB=0.97536;DP=2238;DP4=1054,1098,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.67456e-14;MQSB=0.996022;RPB=0.93736;SGB=81.5311;VDB=0.645483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3420-S.SNP.8:22986445 chr08:022986445 0 W/22986445-22986445 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.95156;DP=3103;DP4=1754,1275,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.12568e-06;MQSB=0.81171;RPB=0.920427;SGB=35.1773;VDB=0.600144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.8:22989769 chr08:022989769 0 W/22989769-22989769 FN1057-S Single Base Substitution G-T INTRON HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN4036-S.SNP.8:22989988 chr08:022989988 0 W/22989988-22989988 FN4036-S SNP T -> C AC=1;AN=168;BQB=0.438663;DP=2570;DP4=1249,1218,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12548e-09;MQSB=0.990498;RPB=0.632383;SGB=34.3388;VDB=0.809859;EFF=INTRON(MODIFIER||||498|LOC_Os08g36420|protein_coding|CODING|LOC_Os08g36420.1|8|1),INTRON(MODIFIER||||498|LOC_Os08g36420|protein_coding|CODING|LOC_Os08g36420.2|8|1),INTRON(MODIFIER||||498|LOC_Os08g36420|protein_coding|CODING|LOC_Os08g36420.3|8|1),INTRON(MODIFIER||||369|LOC_Os08g36420|protein_coding|CODING|LOC_Os08g36420.4|7|1),INTRON(MODIFIER||||471|LOC_Os08g36420|protein_coding|CODING|LOC_Os08g36420.5|8|1) FN_N1-26-1.SNP.8:22992666 chr08:022992666 0 W/22992666-22992666 FN_N1-26-1 Single Base Substitution T-C Homo LOC_Os08g36420 metal cation transporter, putative, expressed SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. 701-3.SNP.8:22994861 chr08:022994861 0 W/22994861-22994861 701-3 Single Base Substitution C-T UTR_5_PRIME HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN1602-S.SNP.8:22997370 chr08:022997370 0 W/22997370-22997370 FN1602-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g36440 HVA22, putative, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1602-S.SNP.8:22997371 chr08:022997371 0 W/22997371-22997371 FN1602-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3814-S.SNP.8:22998548 chr08:022998548 0 W/22998548-22998548 FN3814-S SNP C -> A AC=1;AN=190;BQB=0.567299;DP=2624;DP4=1316,1242,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0102347;MQSB=0.848135;RPB=0.623964;SGB=26.3271;VDB=0.361296;EFF=INTERGENIC(MODIFIER||||||||||1) FN1722-S.SNP.8:23008404 chr08:023008404 0 W/23008404-23008404 FN1722-S SNP G -> A AC=2;AN=188;BQB=0.351503;DP=3777;DP4=1928,1773,32,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.40597e-26;MQSB=0.949848;RPB=0.998762;SGB=-174.882;VDB=0.162055;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.8:23017386 chr08:023017386 0 W/23017386-23017386 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.982571;DP=1697;DP4=848,788,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.04737e-05;MQSB=0.987368;RPB=0.832506;SGB=35.4339;VDB=0.293521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.8:23022818 chr08:023022818 0 W/23022818-23022818 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.929117;DP=2595;DP4=1326,1134,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.8169e-10;MQSB=0.63366;RPB=0.368796;SGB=24.6155;VDB=0.0598515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.8:23025642 chr08:023025642 0 W/23025642-23025642 FN2658-S SNP G -> A AC=2;AN=200;BQB=0.990799;DP=5458;DP4=2554,2542,31,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.23189e-30;MQSB=0.999969;RPB=0.259066;SGB=128.481;VDB=0.176687;EFF=INTERGENIC(MODIFIER||||||||||1) FN-399.SNP.8:23033388 chr08:023033388 0 W/23033388-23033388 FN-399 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g36480 nitrate reductase, putative, expressed SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.8:23033388 chr08:023033388 0 W/23033388-23033388 FN399-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g36480 nitrate reductase, putative, expressed SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3778-S.SNP.8:23038998 chr08:023038998 0 W/23038998-23038998 FN3778-S SNP A -> T AC=1;AN=190;BQB=0.989722;DP=2659;DP4=1224,931,9,1;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.000188409;MQSB=0.414559;RPB=0.893924;SGB=39.9877;VDB=0.891275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.8:23039972 chr08:023039972 0 W/23039972-23039972 FN2376 SNP C -> T AC=1;AN=192;BQB=0.16128;DP=4958;DP4=2450,2129,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.6734e-11;MQSB=0.979999;RPB=0.73197;SGB=12.0478;VDB=0.566099;EFF=INTRON(MODIFIER||||779|LOC_Os08g36490|protein_coding|CODING|LOC_Os08g36490.1|1|1) FN1657-S.SNP.8:23046442 chr08:023046442 0 W/23046442-23046442 FN1657-S Single Base Substitution C-T INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN797-S.SNP.8:23048409 chr08:023048409 0 W/23048409-23048409 FN797-S Single Base Substitution G-T INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3902-S.SNP.8:23056907 chr08:023056907 0 W/23056907-23056907 FN3902-S SNP A -> T AC=1;AN=158;BQB=0.885586;DP=2513;DP4=1135,1253,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000397931;MQB=1.68179e-06;MQSB=0.900243;RPB=0.105811;SGB=37.4429;VDB=0.196668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.8:23062929 chr08:023062929 0 W/23062929-23062929 FN3955-S SNP C -> T AC=1;AN=168;BQB=0.197245;DP=2700;DP4=1356,1248,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.185767;MQSB=0.262925;RPB=0.934411;SGB=38.1788;VDB=0.375798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G100S|205|LOC_Os08g36520|protein_coding|CODING|LOC_Os08g36520.1|1|1) FN3432-S.SNP.8:23068872 chr08:023068872 0 W/23068872-23068872 FN3432-S SNP G -> A AC=2;AN=184;BQB=0.939762;DP=2931;DP4=1306,1505,17,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.6236e-22;MQSB=0.814233;RPB=0.695005;SGB=127.314;VDB=0.72147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.8:23075351 chr08:023075351 0 W/23075351-23075351 FN2602-S SNP G -> C AC=2;AN=198;BQB=0.345949;DP=3741;DP4=2014,1417,12,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.10291e-10;MQSB=0.0190419;RPB=0.989779;SGB=77.1196;VDB=0.643808;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.8:23075387 chr08:023075387 0 W/23075387-23075387 FN443-S Single Base Substitution C-T INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN1121-S.SNP.8:23076638 chr08:023076638 0 W/23076638-23076638 FN1121-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g36560 emp24/gp25L/p24 family protein, putative, expressed SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2102-S.SNP.8:23079824 chr08:023079824 0 W/23079824-23079824 FN2102-S SNP A -> G AC=1;AN=168;BQB=0.985528;DP=2168;DP4=1114,1010,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34002e-09;MQSB=0.877149;RPB=0.842514;SGB=31.908;VDB=0.234662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.8:23080259 chr08:023080259 0 W/23080259-23080259 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.814211;DP=4665;DP4=2222,2186,3,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00356716;MQSB=0.97675;RPB=0.896053;SGB=22.0312;VDB=0.969033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.8:23083355 chr08:023083355 0 W/23083355-23083355 FN3511-S SNP G -> A AC=2;AN=188;BQB=0.858994;DP=3134;DP4=1560,1476,5,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.98578e-10;MQSB=0.999968;RPB=0.728554;SGB=76.2387;VDB=0.254512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.8:23084427 chr08:023084427 0 W/23084427-23084427 FN2231-S SNP C -> T AC=2;AN=190;BQB=0.0163714;DP=4432;DP4=2122,2044,16,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000225632;MQB=1.94448e-14;MQSB=2.29491e-07;RPB=0.21316;SGB=114.286;VDB=0.067904;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.8:23084478 chr08:023084478 0 W/23084478-23084478 FN-334 Single Base Substitution G-C INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1669-S.SNP.8:23088073 chr08:023088073 0 W/23088073-23088073 FN1669-S SNP T -> A AC=2;AN=188;BQB=0.617219;DP=3147;DP4=1730,1364,16,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.89294e-15;MQSB=0.310535;RPB=0.445707;SGB=-4.67716;VDB=0.284894;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.8:23097504 chr08:023097504 0 W/23097504-23097504 FN941-S Single Base Substitution C-T INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2584-S.SNP.8:23102325 chr08:023102325 0 W/23102325-23102325 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.763112;DP=4071;DP4=1931,1953,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0169492;MQB=0.0332534;MQSB=0.510283;RPB=0.381906;SGB=113.881;VDB=0.812808;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S124|1633|LOC_Os08g36620|protein_coding|CODING|LOC_Os08g36620.1|1|1) FN1586-S.SNP.8:23106305 chr08:023106305 0 W/23106305-23106305 FN1586-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g36620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1634-S.SNP.8:23108300 chr08:023108300 0 W/23108300-23108300 FN1634-S Single Base Substitution C-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2298.SNP.8:23114697 chr08:023114697 0 W/23114697-23114697 FN2298 SNP G -> C AC=1;AN=192;BQB=0.386658;DP=4904;DP4=2359,2235,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.4839e-18;MQSB=0.846583;RPB=0.982457;SGB=-42.2982;VDB=0.00524335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.8:23116200 chr08:023116200 0 W/23116200-23116200 FN3522-S SNP C -> T AC=2;AN=188;BQB=0.999949;DP=2640;DP4=1166,1373,9,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.31204e-11;MQSB=0.970463;RPB=0.089857;SGB=80.782;VDB=0.0445531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.8:23121234 chr08:023121234 0 W/23121234-23121234 FN2286 SNP C -> A AC=1;AN=192;BQB=0.0104419;DP=4531;DP4=2009,1692,17,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000220702;MQB=9.19308e-11;MQSB=0.662184;RPB=0.173492;SGB=-238.727;VDB=0.835595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1736-S.SNP.8:23134740 chr08:023134740 0 W/23134740-23134740 FN1736-S SNP G -> A AC=1;AN=188;BQB=0.313246;DP=1296;DP4=550,683,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30326e-08;MQSB=0.491862;RPB=0.924701;SGB=62.6088;VDB=0.0993985;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I342|657|LOC_Os08g36660|protein_coding|CODING|LOC_Os08g36660.1|2|1) FN4234-S.SNP.8:23136925 chr08:023136925 0 W/23136925-23136925 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.574083;DP=2436;DP4=912,1437,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.6455e-08;MQSB=0.922845;RPB=0.978355;SGB=52.3148;VDB=0.198193;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.8:23137805 chr08:023137805 0 W/23137805-23137805 FN4043-S SNP C -> T AC=1;AN=168;BQB=0.561387;DP=2208;DP4=1152,995,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=7.86623e-08;MQSB=0.00983894;RPB=0.99315;SGB=61.0344;VDB=0.755735;EFF=INTRON(MODIFIER||||1081|LOC_Os08g36670|protein_coding|CODING|LOC_Os08g36670.1|15|1) FN2378.SNP.8:23139691 chr08:023139691 0 W/23139691-23139691 FN2378 SNP C -> T AC=1;AN=192;BQB=0.91869;DP=4628;DP4=2128,2138,8,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.28977e-16;MQSB=0.929821;RPB=0.401088;SGB=22.9983;VDB=0.219841;EFF=INTRON(MODIFIER||||1081|LOC_Os08g36670|protein_coding|CODING|LOC_Os08g36670.1|13|1) FN3391-S.SNP.8:23140566 chr08:023140566 0 W/23140566-23140566 FN3391-S SNP A -> T AC=1;AN=184;BQB=0.999508;DP=3368;DP4=1465,1717,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11102e-09;MQSB=0.905981;RPB=0.989557;SGB=80.3949;VDB=0.904602;EFF=INTRON(MODIFIER||||1081|LOC_Os08g36670|protein_coding|CODING|LOC_Os08g36670.1|10|1) FN3677-S.SNP.8:23142653 chr08:023142653 0 W/23142653-23142653 FN3677-S SNP G -> C AC=1;AN=190;BQB=0.931672;DP=2737;DP4=1224,1404,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.73423e-08;MQSB=0.932643;RPB=0.982136;SGB=58.2031;VDB=0.219351;EFF=INTRON(MODIFIER||||1081|LOC_Os08g36670|protein_coding|CODING|LOC_Os08g36670.1|3|1) FN1619-S.SNP.8:23147055 chr08:023147055 0 W/23147055-23147055 FN1619-S Single Base Substitution T-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1493-S.SNP.8:23152756 chr08:023152756 0 W/23152756-23152756 FN1493-S Single Base Substitution G-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN4187-S.SNP.8:23154382 chr08:023154382 0 W/23154382-23154382 FN4187-S SNP T -> A AC=2;AN=170;BQB=0.686091;DP=2346;DP4=1113,1083,17,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.6384e-12;MQSB=0.987396;RPB=0.391978;SGB=89.9604;VDB=0.973557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2564-S.SNP.8:23156725 chr08:023156725 0 W/23156725-23156725 FN2564-S SNP G -> A AC=1;AN=198;BQB=0.546094;DP=3640;DP4=1585,1906,4,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000392155;MQSB=0.511898;RPB=0.968319;SGB=21.981;VDB=0.5413;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H44|99|LOC_Os08g36690|protein_coding|CODING|LOC_Os08g36690.1|1|1) FN4202-S.SNP.8:23156725 chr08:023156725 0 W/23156725-23156725 FN4202-S SNP G -> A AC=2;AN=170;BQB=0.669073;DP=2329;DP4=929,1309,14,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.1314e-17;MQSB=0.879064;RPB=0.748286;SGB=150.053;VDB=0.965403;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H44|99|LOC_Os08g36690|protein_coding|CODING|LOC_Os08g36690.1|1|1) FN1340-S.SNP.8:23166311 chr08:023166311 0 W/23166311-23166311 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN450-S.SNP.8:23179860 chr08:023179860 0 W/23179860-23179860 FN450-S Single Base Substitution G-A INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1438-S.SNP.8:23188055 chr08:023188055 0 W/23188055-23188055 FN1438-S Single Base Substitution G-C INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN593-S.SNP.8:23189456 chr08:023189456 0 W/23189456-23189456 FN593-S Single Base Substitution G-A INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN-363.SNP.8:23199289 chr08:023199289 0 W/23199289-23199289 FN-363 Single Base Substitution T-C INTERGENIC HET SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2184-S.SNP.8:23202578 chr08:023202578 0 W/23202578-23202578 FN2184-S SNP G -> A AC=1;AN=190;BQB=0.221281;DP=4874;DP4=1801,2628,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.78862e-08;MQSB=0.68693;RPB=0.993047;SGB=-54.5347;VDB=0.930993;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.8:23202615 chr08:023202615 0 W/23202615-23202615 FN4271-S SNP G -> T AC=1;AN=170;BQB=0.949557;DP=2860;DP4=1227,1506,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.55004e-11;MQSB=0.999291;RPB=0.978061;SGB=55.5339;VDB=0.974833;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.8:23203311 chr08:023203311 0 W/23203311-23203311 FN-344 Single Base Substitution T-G INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2345.SNP.8:23204470 chr08:023204470 0 W/23204470-23204470 FN2345 SNP T -> A AC=2;AN=192;BQB=0.801957;DP=4732;DP4=2145,2205,22,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.02325e-24;MQSB=0.967764;RPB=0.845391;SGB=227.22;VDB=0.0453549;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.8:23208483 chr08:023208483 0 W/23208483-23208483 FN626-S Single Base Substitution C-A INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2295.SNP.8:23208631 chr08:023208631 0 W/23208631-23208631 FN2295 SNP C -> A AC=1;AN=192;BQB=0.967524;DP=5401;DP4=2571,2430,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.37557e-12;MQSB=0.903088;RPB=0.265274;SGB=-37.0704;VDB=0.700488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.8:23210763 chr08:023210763 0 W/23210763-23210763 FN3967-S SNP T -> C AC=1;AN=182;BQB=0.701639;DP=2429;DP4=1130,1215,8,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.11181e-10;MQSB=0.941369;RPB=0.650209;SGB=67.2255;VDB=0.426233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.8:23227320 chr08:023227320 0 W/23227320-23227320 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.804071;DP=6574;DP4=3916,2289,10,4;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0384849;MQB=0.706989;MQSB=0;RPB=0.512211;SGB=40.2696;VDB=0.585335;EFF=INTRON(MODIFIER||||501|LOC_Os08g36774|protein_coding|CODING|LOC_Os08g36774.1|4|1) FN3746-S.SNP.8:23227320 chr08:023227320 0 W/23227320-23227320 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.608556;DP=4042;DP4=2009,1822,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.0781791;MQB=0.812616;MQSB=1.41459e-24;RPB=0.918884;SGB=80.9724;VDB=0.770241;EFF=INTRON(MODIFIER||||501|LOC_Os08g36774|protein_coding|CODING|LOC_Os08g36774.1|4|1) W426-1-1.SNP.8:23232465 chr08:023232465 0 W/23232465-23232465 W426-1-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3838-S.SNP.8:23233978 chr08:023233978 0 W/23233978-23233978 FN3838-S SNP G -> A AC=2;AN=190;BQB=0.389235;DP=2700;DP4=1264,1217,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.53656e-10;MQSB=0.97874;RPB=0.143706;SGB=56.8601;VDB=0.589191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.8:23241237 chr08:023241237 0 W/23241237-23241237 FN1046-S Single Base Substitution A-G INTERGENIC HOMO SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN185-2_3_4.SNP.8:23244658 chr08:023244658 0 W/23244658-23244658 FN185-2_3_4 SNP G -> C AC=1;AN=188;BQB=0.925642;DP=3444;DP4=1586,1812,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.12389e-07;MQSB=0.946363;RPB=0.600982;SGB=39.5276;VDB=0.553256;EFF=INTERGENIC(MODIFIER||||||||||1) FN1462-S.SNP.8:23244788 chr08:023244788 0 W/23244788-23244788 FN1462-S Single Base Substitution G-C INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1369-S.SNP.8:23245283 chr08:023245283 0 W/23245283-23245283 FN1369-S Single Base Substitution T-A INTERGENIC HET SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2562-S.SNP.8:23253605 chr08:023253605 0 W/23253605-23253605 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.29323;DP=4054;DP4=1927,1904,21,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.65773e-23;MQSB=0.993816;RPB=0.205762;SGB=44.442;VDB=0.162991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.8:23269321 chr08:023269321 0 W/23269321-23269321 FN3422-S SNP A -> T AC=1;AN=184;BQB=0.928427;DP=2818;DP4=1290,1452,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.38999e-10;MQSB=0.739178;RPB=0.996353;SGB=66.8296;VDB=0.894396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.8:23269838 chr08:023269838 0 W/23269838-23269838 FN2426 SNP T -> C AC=1;AN=200;BQB=0.161053;DP=4847;DP4=2373,2209,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17636e-09;MQSB=0.995206;RPB=0.856032;SGB=32.0901;VDB=0.72439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.8:23272675 chr08:023272675 0 W/23272675-23272675 FN3666-S SNP T -> C AC=1;AN=190;BQB=0.991811;DP=2950;DP4=1468,1380,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10515e-14;MQSB=0.854863;RPB=0.738228;SGB=41.5369;VDB=0.891805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.8:23279410 chr08:023279410 0 W/23279410-23279410 FN2390 SNP G -> A AC=1;AN=200;BQB=0.637467;DP=4647;DP4=2274,1989,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.81415e-08;MQSB=0.989074;RPB=0.995819;SGB=68.0801;VDB=0.857478;EFF=INTRON(MODIFIER||||513|LOC_Os08g36840|protein_coding|CODING|LOC_Os08g36840.1|6|1) FN3473-S.SNP.8:23282768 chr08:023282768 0 W/23282768-23282768 FN3473-S SNP G -> A AC=1;AN=184;BQB=0.925082;DP=2555;DP4=1414,1066,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59052e-08;MQSB=0.996198;RPB=0.174652;SGB=66.8296;VDB=0.60711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3347-S.SNP.8:23287411 chr08:023287411 0 W/23287411-23287411 FN3347-S SNP T -> C AC=1;AN=184;BQB=0.733799;DP=3781;DP4=1444,2129,9,20;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.94134e-15;MQSB=0.914141;RPB=0.994241;SGB=-8.45255;VDB=0.46057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.8:23290992 chr08:023290992 0 W/23290992-23290992 FN-168 Single Base Substitution A-T INTRON HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN775-S.SNP.8:23291986 chr08:023291986 0 W/23291986-23291986 FN775-S Single Base Substitution C-A INTRON HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2354.SNP.8:23301610 chr08:023301610 0 W/23301610-23301610 FN2354 SNP G -> A AC=1;AN=192;BQB=0.924166;DP=6408;DP4=2879,3102,19,20;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.188358;MQB=0.145459;MQSB=0;RPB=0.0791944;SGB=172.448;VDB=0.0613884;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E773|806|LOC_Os08g36870|protein_coding|CODING|LOC_Os08g36870.1|3|1) FN3436-S.SNP.8:23310853 chr08:023310853 0 W/23310853-23310853 FN3436-S SNP T -> A AC=1;AN=184;BQB=0.998849;DP=3888;DP4=2093,1674,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.311986;MQB=0.058477;MQSB=0.924089;RPB=0.666031;SGB=75.8731;VDB=0.439548;EFF=INTERGENIC(MODIFIER||||||||||1) FN-75.SNP.8:23312672 chr08:023312672 0 W/23312672-23312672 FN-75 Single Base Substitution C-T INTERGENIC HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN3713-S.SNP.8:23313878 chr08:023313878 0 W/23313878-23313878 FN3713-S SNP G -> T AC=2;AN=190;BQB=0.999779;DP=2811;DP4=1437,1229,21,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.92648e-18;MQSB=0.959115;RPB=0.934243;SGB=144.727;VDB=0.663394;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.8:23314919 chr08:023314919 0 W/23314919-23314919 FN3443-S SNP C -> T AC=1;AN=184;BQB=0.999253;DP=2357;DP4=1215,1065,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.46519e-06;MQSB=0.988282;RPB=0.523927;SGB=35.1773;VDB=0.222697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.8:23319689 chr08:023319689 0 W/23319689-23319689 FN2234-S SNP C -> A AC=2;AN=190;BQB=0.376158;DP=3433;DP4=1581,1408,8,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00029129;MQB=3.06211e-08;MQSB=0.000835214;RPB=0.947639;SGB=58.2031;VDB=0.240377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.8:23319690 chr08:023319690 0 W/23319690-23319690 FN2234-S SNP G -> T AC=2;AN=190;BQB=0.311611;DP=3439;DP4=1652,1504,8,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000581564;MQB=4.4582e-07;MQSB=0.000122121;RPB=0.888058;SGB=58.2031;VDB=0.23502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.8:23323367 chr08:023323367 0 W/23323367-23323367 FN3460-S SNP G -> A AC=2;AN=184;BQB=0.8762;DP=3085;DP4=1528,1433,10,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000324149;MQB=6.22846e-08;MQSB=0.0955252;RPB=0.925798;SGB=80.3949;VDB=0.381647;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.8:23329668 chr08:023329668 0 W/23329668-23329668 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN555-S.SNP.8:23332511 chr08:023332511 0 W/23332511-23332511 FN555-S Single Base Substitution G-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN-135.SNP.8:23336353 chr08:023336353 0 W/23336353-23336353 FN-135 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g36900 alpha-amylase precursor, putative, expressed SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN3851-S.SNP.8:23339818 chr08:023339818 0 W/23339818-23339818 FN3851-S SNP A -> G AC=1;AN=158;BQB=0.93822;DP=2069;DP4=997,929,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.45965e-10;MQSB=0.218521;RPB=0.597073;SGB=47.5512;VDB=0.329102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.8:23344567 chr08:023344567 0 W/23344567-23344567 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.97917;DP=3077;DP4=1248,1726,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21117e-10;MQSB=0.975877;RPB=0.974187;SGB=49.835;VDB=0.75716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.8:23349514 chr08:023349514 0 W/23349514-23349514 FN2574-S SNP G -> A AC=1;AN=198;BQB=0.00718908;DP=4423;DP4=2143,1963,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000226091;MQB=3.01449e-05;MQSB=0.998848;RPB=0.444097;SGB=-33.8063;VDB=0.801047;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.8:23355313 chr08:023355313 0 W/23355313-23355313 FN3356-S SNP C -> A AC=2;AN=184;BQB=0.684982;DP=3356;DP4=1468,1735,15,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.45063e-16;MQSB=0.978366;RPB=0.281928;SGB=143.7;VDB=0.565939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.8:23361473 chr08:023361473 0 W/23361473-23361473 FN2386 SNP T -> C AC=1;AN=192;BQB=0.496102;DP=4572;DP4=2068,2251,16,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.60118e-13;MQSB=0.000146836;RPB=0.701757;SGB=75.4235;VDB=0.244019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.8:23367494 chr08:023367494 0 W/23367494-23367494 FN1103-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g36930 retrotransposon protein, putative, unclassified, expressed SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN4030-S.SNP.8:23370556 chr08:023370556 0 W/23370556-23370556 FN4030-S SNP C -> T AC=1;AN=168;BQB=0.991602;DP=3060;DP4=1697,1270,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=18;MQ0F=0.376471;MQB=0.406209;MQSB=6.30217e-13;RPB=0.924266;SGB=17.3231;VDB=0.997864;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A726|1054|LOC_Os08g36940|protein_coding|CODING|LOC_Os08g36940.1|2|1) FN894-S.SNP.8:23391107 chr08:023391107 0 W/23391107-23391107 FN894-S Single Base Substitution T-A INTRON HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2200-S.SNP.8:23394932 chr08:023394932 0 W/23394932-23394932 FN2200-S SNP T -> A AC=2;AN=190;BQB=0.915046;DP=4983;DP4=2480,2111,25,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.98544e-24;MQSB=0.976404;RPB=0.997873;SGB=0.624943;VDB=0.3163;EFF=INTRON(MODIFIER||||763|LOC_Os08g36994|protein_coding|CODING|LOC_Os08g36994.1|5|1),INTRON(MODIFIER||||721|LOC_Os08g36994|protein_coding|CODING|LOC_Os08g36994.2|5|1) FN1394-S.SNP.8:23407762 chr08:023407762 0 W/23407762-23407762 FN1394-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN785-S.SNP.8:23407988 chr08:023407988 0 W/23407988-23407988 FN785-S Single Base Substitution C-A INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2293.SNP.8:23414974 chr08:023414974 0 W/23414974-23414974 FN2293 SNP G -> A AC=1;AN=192;BQB=0.000129937;DP=5152;DP4=2186,2453,8,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194099;MQB=1.66976e-12;MQSB=0.938078;RPB=0.390772;SGB=-366.147;VDB=0.679453;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.8:23415571 chr08:023415571 0 W/23415571-23415571 FN1068-S Single Base Substitution G-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN-65.SNP.8:23417908 chr08:023417908 0 W/23417908-23417908 FN-65 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g37050 gibberellin receptor GID1L2, putative, expressed SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN596-S.SNP.8:23421983 chr08:023421983 0 W/23421983-23421983 FN596-S Single Base Substitution T-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1675-S.SNP.8:23425091 chr08:023425091 0 W/23425091-23425091 FN1675-S SNP G -> A AC=1;AN=188;BQB=0.411159;DP=3538;DP4=1808,1695,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.31342e-09;MQSB=0.953372;RPB=0.996302;SGB=10.1681;VDB=0.173915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.8:23425554 chr08:023425554 0 W/23425554-23425554 FN2296 SNP G -> A AC=1;AN=192;BQB=0.822456;DP=5047;DP4=2547,2164,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.93358e-16;MQSB=0.949946;RPB=0.290396;SGB=-7.43215;VDB=0.422045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V7I|106|LOC_Os08g37070|protein_coding|CODING|LOC_Os08g37070.1|1|1) FN2725-S.SNP.8:23436547 chr08:023436547 0 W/23436547-23436547 FN2725-S SNP A -> T AC=2;AN=200;BQB=0.932763;DP=5045;DP4=2437,2406,13,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000198216;MQB=6.47212e-14;MQSB=0.989238;RPB=0.74984;SGB=19.1209;VDB=0.790112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.8:23439648 chr08:023439648 0 W/23439648-23439648 FN2272-S SNP T -> C AC=1;AN=190;BQB=0.996793;DP=5031;DP4=2301,2159,15,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.48292e-19;MQSB=0.491794;RPB=0.998185;SGB=114.286;VDB=0.115289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.8:23442305 chr08:023442305 0 W/23442305-23442305 FN1508-S Single Base Substitution G-A INTERGENIC Homo SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3966-S.SNP.8:23442468 chr08:023442468 0 W/23442468-23442468 FN3966-S SNP G -> C AC=1;AN=168;BQB=0.991251;DP=2745;DP4=1263,1345,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.2374e-10;MQSB=0.918357;RPB=0.652464;SGB=7.05233;VDB=0.314481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.8:23456894 chr08:023456894 0 W/23456894-23456894 FN1301-S Single Base Substitution G-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2216-S.SNP.8:23465305 chr08:023465305 0 W/23465305-23465305 FN2216-S SNP G -> A AC=2;AN=190;BQB=0.716398;DP=4009;DP4=2288,1434,20,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.7903e-12;MQSB=0.944868;RPB=0.243541;SGB=24.3115;VDB=0.72645;EFF=INTRON(MODIFIER||||257|LOC_Os08g37130|protein_coding|CODING|LOC_Os08g37130.1|4|1) FN1741-S.SNP.8:23469169 chr08:023469169 0 W/23469169-23469169 FN1741-S SNP G -> C AC=1;AN=188;BQB=0.879457;DP=3259;DP4=1767,1463,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.41898e-05;MQSB=0.955589;RPB=0.95579;SGB=21.8113;VDB=0.687358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T251R|293|LOC_Os08g37140|protein_coding|CODING|LOC_Os08g37140.1|6|1) FN1687-S.SNP.8:23485989 chr08:023485989 0 W/23485989-23485989 FN1687-S SNP A -> T AC=1;AN=188;BQB=2.92167e-19;DP=2464;DP4=1283,1011,60,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0115585;MQSB=0.971261;RPB=5.10149e-06;SGB=-793.216;VDB=3.0179e-10;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.8:23487980 chr08:023487980 0 W/23487980-23487980 FN2434 SNP A -> G AC=2;AN=200;BQB=0.97578;DP=4239;DP4=1757,2084,5,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000235905;MQB=4.56273e-07;MQSB=0.00278946;RPB=0.0509618;SGB=58.8698;VDB=0.651289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.8:23487980 chr08:023487980 0 W/23487980-23487980 FN3326-S SNP A -> G AC=2;AN=184;BQB=0.847363;DP=2778;DP4=1664,999,16,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.39581e-15;MQSB=0.998353;RPB=0.280333;SGB=107.526;VDB=0.474777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.8:23494056 chr08:023494056 0 W/23494056-23494056 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.535355;DP=3712;DP4=1713,1778,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.64811e-08;MQSB=0.934965;RPB=0.744857;SGB=36.5539;VDB=0.838639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D118N|430|LOC_Os08g37180|protein_coding|CODING|LOC_Os08g37180.1|1|1) FN4146-S.SNP.8:23496258 chr08:023496258 0 W/23496258-23496258 FN4146-S SNP C -> T AC=1;AN=170;BQB=0.754189;DP=2248;DP4=1123,1032,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0676157;MQB=0.157744;MQSB=2.01679e-32;RPB=0.608154;SGB=38.3207;VDB=0.260041;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.8:23497459 chr08:023497459 0 W/23497459-23497459 FN_955-1 Single Base Substitution C-T Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN4100-S.SNP.8:23505567 chr08:023505567 0 W/23505567-23505567 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.327339;DP=3058;DP4=1489,1502,8,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.43692e-05;MQSB=0.990756;RPB=0.973406;SGB=62.1548;VDB=0.0870689;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.8:23511755 chr08:023511755 0 W/23511755-23511755 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2573-S.SNP.8:23514914 chr08:023514914 0 W/23514914-23514914 FN2573-S SNP T -> A AC=1;AN=198;BQB=0.766885;DP=3915;DP4=1862,1865,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00715198;MQB=5.52863e-05;MQSB=0.151038;RPB=0.878867;SGB=25.7687;VDB=0.729128;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.8:23515409 chr08:023515409 0 W/23515409-23515409 FN2407 SNP G -> A AC=1;AN=200;BQB=0.348042;DP=4612;DP4=2320,2048,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09037e-10;MQSB=0.95702;RPB=0.935208;SGB=17.5158;VDB=0.0925238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.8:23516522 chr08:023516522 0 W/23516522-23516522 FN2534-S SNP T -> A AC=1;AN=198;BQB=0.891782;DP=3900;DP4=1860,1893,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.8363e-07;MQSB=0.957521;RPB=0.275061;SGB=29.3637;VDB=0.0426332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.8:23529978 chr08:023529978 0 W/23529978-23529978 FN-234 Single Base Substitution G-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-56.SNP.8:23532672 chr08:023532672 0 W/23532672-23532672 FN-56 Single Base Substitution C-G INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN2141-S.SNP.8:23534273 chr08:023534273 0 W/23534273-23534273 FN2141-S SNP A -> C AC=2;AN=168;BQB=0.215388;DP=3654;DP4=1756,1821,17,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.99367e-25;MQSB=0.856316;RPB=0.607599;SGB=54.2693;VDB=0.835106;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.8:23535033 chr08:023535033 0 W/23535033-23535033 FN870-S Single Base Substitution A-G INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN1345-S.SNP.8:23546327 chr08:023546327 0 W/23546327-23546327 FN1345-S Single Base Substitution T-G INTRON HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2088-S.SNP.8:23551804 chr08:023551804 0 W/23551804-23551804 FN2088-S SNP G -> A AC=1;AN=168;BQB=0.0169567;DP=3649;DP4=1870,1723,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.71324e-07;MQSB=0.962205;RPB=0.535697;SGB=-92.9238;VDB=0.148493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.8:23551805 chr08:023551805 0 W/23551805-23551805 FN2088-S SNP C -> A AC=1;AN=168;BQB=0.033671;DP=3663;DP4=1877,1730,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.46621e-07;MQSB=0.976615;RPB=0.998483;SGB=-92.9238;VDB=0.13466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.8:23563945 chr08:023563945 0 W/23563945-23563945 FN2296 SNP G -> A AC=1;AN=192;BQB=0.995257;DP=5066;DP4=2411,2370,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.42778e-18;MQSB=0.987734;RPB=0.658477;SGB=93.2452;VDB=0.44299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V108I|456|LOC_Os08g37280|protein_coding|CODING|LOC_Os08g37280.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V108I|422|LOC_Os08g37280|protein_coding|CODING|LOC_Os08g37280.2|5|1) FN4124-S.SNP.8:23565165 chr08:023565165 0 W/23565165-23565165 FN4124-S SNP G -> T AC=1;AN=182;BQB=0.94022;DP=2899;DP4=1417,1412,12,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.19285e-12;MQSB=0.950048;RPB=0.843027;SGB=70.7363;VDB=0.150849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R182I|456|LOC_Os08g37280|protein_coding|CODING|LOC_Os08g37280.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R182I|422|LOC_Os08g37280|protein_coding|CODING|LOC_Os08g37280.2|7|1) FN2293.SNP.8:23568504 chr08:023568504 0 W/23568504-23568504 FN2293 SNP G -> C AC=2;AN=192;BQB=0.595095;DP=4268;DP4=1850,2111,17,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.37898e-18;MQSB=0.670572;RPB=0.79345;SGB=114.631;VDB=0.476425;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.8:23577137 chr08:023577137 0 W/23577137-23577137 FN764-S Single Base Substitution A-G INTRON HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN3597-S.SNP.8:23577883 chr08:023577883 0 W/23577883-23577883 FN3597-S SNP G -> C AC=2;AN=188;BQB=0.489879;DP=2598;DP4=1277,1262,4,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.00235394;MQSB=0.980112;RPB=0.00245649;SGB=30.8063;VDB=0.00225626;EFF=INTRON(MODIFIER||||259|LOC_Os08g37310|protein_coding|CODING|LOC_Os08g37310.1|3|1),INTRON(MODIFIER||||216|LOC_Os08g37310|protein_coding|CODING|LOC_Os08g37310.2|3|1) FN2477.SNP.8:23578833 chr08:023578833 0 W/23578833-23578833 FN2477 SNP T -> C AC=1;AN=200;BQB=0.771959;DP=4264;DP4=1930,1772,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.69111e-06;MQSB=0.79832;RPB=0.669681;SGB=-16.1361;VDB=0.356154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I86V|259|LOC_Os08g37310|protein_coding|CODING|LOC_Os08g37310.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I86V|216|LOC_Os08g37310|protein_coding|CODING|LOC_Os08g37310.2|1|1) FN405-S.SNP.8:23594388 chr08:023594388 0 W/23594388-23594388 FN405-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN2381.SNP.8:23604172 chr08:023604172 0 W/23604172-23604172 FN2381 SNP G -> T AC=1;AN=192;BQB=0.82974;DP=5218;DP4=2434,2524,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28397e-09;MQSB=0.959285;RPB=0.951128;SGB=50.4731;VDB=0.145868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.8:23606771 chr08:023606771 0 W/23606771-23606771 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.872967;DP=2553;DP4=1334,1127,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.46533e-08;MQSB=0.840926;RPB=0.666016;SGB=53.2642;VDB=0.827148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2206-S.SNP.8:23610054 chr08:023610054 0 W/23610054-23610054 FN2206-S SNP G -> A AC=1;AN=190;BQB=0.67446;DP=4814;DP4=2119,2394,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.74659e-10;MQSB=0.972705;RPB=0.198012;SGB=-12.1142;VDB=0.086886;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.8:23619058 chr08:023619058 0 W/23619058-23619058 FN-289 Single Base Substitution T-A INTERGENIC HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN-288.SNP.8:23621992 chr08:023621992 0 W/23621992-23621992 FN-288 Single Base Substitution C-T INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-164.SNP.8:23625087 chr08:023625087 0 W/23625087-23625087 FN-164 Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1022-S.SNP.8:23629541 chr08:023629541 0 W/23629541-23629541 FN1022-S Single Base Substitution C-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2596-S.SNP.8:23633789 chr08:023633789 0 W/23633789-23633789 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.511488;DP=1434;DP4=607,702,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.172245;MQB=0.99383;MQSB=5.04467e-44;RPB=0.669708;SGB=11.1786;VDB=0.84021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.8:23642063 chr08:023642063 0 W/23642063-23642063 FN1450-S Single Base Substitution A-C INTERGENIC Homo SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1703-S.SNP.8:23664592 chr08:023664592 0 W/23664592-23664592 FN1703-S SNP A -> G AC=2;AN=188;BQB=0.682575;DP=1827;DP4=637,1144,5,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.02561e-07;MQSB=0.966023;RPB=0.353365;SGB=23.5329;VDB=0.629151;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F233S|290|LOC_Os08g37400|protein_coding|CODING|LOC_Os08g37400.1|1|1) FN-118.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN-118 Single Base Substitution A-T INTERGENIC HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-235.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN-235 Single Base Substitution A-T INTERGENIC HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1163-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN1163-S Single Base Substitution A-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1219-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN1219-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1516-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN1516-S Single Base Substitution A-T INTERGENIC Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2309.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN2309 SNP A -> T AC=2;AN=192;BQB=0.000315728;DP=4928;DP4=1774,2495,37,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.64727e-21;MQSB=0.000254916;RPB=0.00159692;SGB=-1386.55;VDB=0.464698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN3552-S SNP A -> T AC=1;AN=188;BQB=0.992987;DP=2637;DP4=1367,1194,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000379219;MQB=6.12172e-10;MQSB=0.998989;RPB=0.734849;SGB=67.1521;VDB=0.331828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN3981-S SNP A -> T AC=2;AN=168;BQB=0.993446;DP=2340;DP4=1240,1011,9,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.35427e-09;MQSB=0.877856;RPB=0.231711;SGB=74.3269;VDB=0.38184;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN4141-S SNP A -> T AC=2;AN=170;BQB=0.824062;DP=1206;DP4=911,265,10,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.03575e-08;MQSB=0.323776;RPB=0.481012;SGB=61.2001;VDB=0.175799;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.8:23667308 chr08:023667308 0 W/23667308-23667308 FN622-S Single Base Substitution A-T INTERGENIC HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN2619-S.SNP.8:23672936 chr08:023672936 0 W/23672936-23672936 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.859772;DP=4523;DP4=2313,1925,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000221092;MQB=1.28131e-15;MQSB=0.922865;RPB=0.528953;SGB=101.266;VDB=0.317146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.8:23680304 chr08:023680304 0 W/23680304-23680304 FN1697-S SNP A -> G AC=1;AN=188;BQB=0.0594606;DP=3800;DP4=1951,1812,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=19;MQ0F=0.327895;MQB=0.550174;MQSB=0;RPB=0.129488;SGB=-39.6481;VDB=0.537533;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.8:23681617 chr08:023681617 0 W/23681617-23681617 FN2436 SNP C -> T AC=1;AN=200;BQB=0.181669;DP=3804;DP4=1753,1654,14,7;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0120925;MQB=0.0202112;MQSB=2.80345e-37;RPB=0.786342;SGB=65.5058;VDB=0.400558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.8:23685145 chr08:023685145 0 W/23685145-23685145 FN1039-S Single Base Substitution T-A INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN-336.SNP.8:23688601 chr08:023688601 0 W/23688601-23688601 FN-336 Single Base Substitution A-T INTERGENIC HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2640-S.SNP.8:23691729 chr08:023691729 0 W/23691729-23691729 FN2640-S SNP T -> C AC=1;AN=200;BQB=0.650874;DP=4914;DP4=2169,2205,19,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.23558e-24;MQSB=0.969935;RPB=0.358053;SGB=-88.9968;VDB=0.551396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.8:23700854 chr08:023700854 0 W/23700854-23700854 FN2126-S SNP A -> T AC=1;AN=168;BQB=0.137485;DP=4143;DP4=1950,2117,17,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4957e-09;MQSB=0.967752;RPB=0.739839;SGB=-196.035;VDB=0.498425;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.8:23702712 chr08:023702712 0 W/23702712-23702712 FN2449 SNP G -> A AC=1;AN=200;BQB=0.381358;DP=4895;DP4=2282,2344,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.85725e-10;MQSB=0.987682;RPB=0.0512572;SGB=39.9056;VDB=0.487935;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.8:23702900 chr08:023702900 0 W/23702900-23702900 FN715-S Single Base Substitution A-G INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN715-S.SNP.8:23702959 chr08:023702959 0 W/23702959-23702959 FN715-S Single Base Substitution A-T INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN715-S.SNP.8:23702960 chr08:023702960 0 W/23702960-23702960 FN715-S Single Base Substitution A-T INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN525-S.SNP.8:23704206 chr08:023704206 0 W/23704206-23704206 FN525-S Single Base Substitution T-A INTERGENIC HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4063-S.SNP.8:23709314 chr08:023709314 0 W/23709314-23709314 FN4063-S SNP C -> A AC=1;AN=168;BQB=0.871198;DP=1690;DP4=771,809,3,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000579647;MQSB=0.903019;RPB=0.997387;SGB=21.16;VDB=0.844031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2306.SNP.8:23711665 chr08:023711665 0 W/23711665-23711665 FN2306 SNP C -> T AC=1;AN=192;BQB=0.999331;DP=4676;DP4=2091,2308,5,2;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000106253;MQSB=0.854188;RPB=0.374606;SGB=14.8306;VDB=0.682525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.8:23716980 chr08:023716980 0 W/23716980-23716980 FN3696-S SNP A -> T AC=1;AN=190;BQB=0.992858;DP=2699;DP4=1369,1169,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23881e-05;MQSB=0.961875;RPB=0.880483;SGB=25.439;VDB=0.577201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R481W|489|LOC_Os08g37432|protein_coding|CODING|LOC_Os08g37432.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R382W|390|LOC_Os08g37432|protein_coding|CODING|LOC_Os08g37432.2|7|1) FN4031-S.SNP.8:23736931 chr08:023736931 0 W/23736931-23736931 FN4031-S SNP C -> A AC=1;AN=168;BQB=0.934973;DP=2755;DP4=1163,1252,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.31897e-06;MQSB=0.953058;RPB=0.900094;SGB=43.3113;VDB=0.273442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.8:23745044 chr08:023745044 0 W/23745044-23745044 FN3759-S SNP G -> C AC=1;AN=190;BQB=0.999961;DP=2670;DP4=1182,1324,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.92363e-09;MQSB=0.987033;RPB=0.937226;SGB=26.2136;VDB=0.521675;EFF=INTRON(MODIFIER||||148|LOC_Os08g37480|protein_coding|CODING|LOC_Os08g37480.1|2|1),INTRON(MODIFIER||||148|LOC_Os08g37480|protein_coding|CODING|LOC_Os08g37480.2|2|1) FN993-S.SNP.8:23745355 chr08:023745355 0 W/23745355-23745355 FN993-S Single Base Substitution G-A INTRON HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN510-S.SNP.8:23747808 chr08:023747808 0 W/23747808-23747808 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2375.SNP.8:23749580 chr08:023749580 0 W/23749580-23749580 FN2375 SNP C -> G AC=1;AN=192;BQB=0.147025;DP=4858;DP4=2340,2233,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.10344e-11;MQSB=0.806995;RPB=0.94338;SGB=-39.2487;VDB=0.88385;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.8:23757792 chr08:023757792 0 W/23757792-23757792 FN2333 SNP C -> A AC=1;AN=192;BQB=0.857258;DP=4774;DP4=2320,2111,16,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.17197e-12;MQSB=0.884649;RPB=0.643394;SGB=-39.2487;VDB=0.373817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P386H|434|LOC_Os08g37500|protein_coding|CODING|LOC_Os08g37500.1|2|1),UTR_3_PRIME(MODIFIER||3681||563|LOC_Os08g37520|protein_coding|CODING|LOC_Os08g37520.1|3|1) FN-161.SNP.8:23760506 chr08:023760506 0 W/23760506-23760506 FN-161 Single Base Substitution A-T INTRON HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN_543-2-6.SNP.8:23764425 chr08:023764425 0 W/23764425-23764425 FN_543-2-6 Single Base Substitution G-A HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN4156-S.SNP.8:23767899 chr08:023767899 0 W/23767899-23767899 FN4156-S SNP G -> A AC=1;AN=170;BQB=0.94852;DP=3738;DP4=1920,1739,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.166667;MQB=0.720394;MQSB=1.1283e-18;RPB=0.55557;SGB=55.5339;VDB=0.070503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V164M|1995|LOC_Os08g37530|protein_coding|CODING|LOC_Os08g37530.1|1|1) FN2257-S.SNP.8:23770147 chr08:023770147 0 W/23770147-23770147 FN2257-S SNP A -> G AC=2;AN=190;BQB=0.894572;DP=4313;DP4=1858,1932,25,19;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0217946;MQB=6.19447e-15;MQSB=0.0620077;RPB=0.833699;SGB=49.1735;VDB=0.863773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D913G|1995|LOC_Os08g37530|protein_coding|CODING|LOC_Os08g37530.1|1|1) FN975-S.SNP.8:23781008 chr08:023781008 0 W/23781008-23781008 FN975-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2791-S.SNP.8:23784644 chr08:023784644 0 W/23784644-23784644 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.906854;DP=3686;DP4=1818,1660,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.00732501;MQB=0.00375833;MQSB=1.14535e-20;RPB=0.751352;SGB=65.3149;VDB=0.692287;EFF=INTRON(MODIFIER||||1675|LOC_Os08g37560|protein_coding|CODING|LOC_Os08g37560.1|4|1) FN4234-S.SNP.8:23796922 chr08:023796922 0 W/23796922-23796922 FN4234-S SNP T -> C AC=1;AN=170;BQB=0.978603;DP=2531;DP4=1348,1100,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.7743e-07;MQSB=0.784744;RPB=0.9956;SGB=47.8722;VDB=0.168008;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.8:23797208 chr08:023797208 0 W/23797208-23797208 FN543-S Single Base Substitution T-C INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2696-S.SNP.8:23800145 chr08:023800145 0 W/23800145-23800145 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.997792;DP=4869;DP4=2357,2199,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33564e-14;MQSB=0.825427;RPB=0.990441;SGB=17.5158;VDB=0.123581;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.8:23801852 chr08:023801852 0 W/23801852-23801852 FN3366-S SNP C -> T AC=2;AN=184;BQB=0.963861;DP=2754;DP4=1217,1413,15,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31185e-13;MQSB=0.912953;RPB=0.619063;SGB=56.0583;VDB=0.717738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.8:23802130 chr08:023802130 0 W/23802130-23802130 FN1279-S Single Base Substitution G-A INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN890-S.SNP.8:23802984 chr08:023802984 0 W/23802984-23802984 FN890-S Single Base Substitution A-G INTERGENIC HOMO SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN4011-S.SNP.8:23806166 chr08:023806166 0 W/23806166-23806166 FN4011-S SNP G -> T AC=1;AN=168;BQB=0.831788;DP=2637;DP4=1270,1247,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.26413e-08;MQSB=0.10182;RPB=0.900122;SGB=29.4772;VDB=0.868703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.8:23814943 chr08:023814943 0 W/23814943-23814943 FN3987-S SNP G -> A AC=1;AN=168;BQB=0.671619;DP=2672;DP4=1128,1392,5,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.31861e-11;MQSB=0.470524;RPB=0.350466;SGB=55.3328;VDB=0.165792;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.8:23815433 chr08:023815433 0 W/23815433-23815433 FN3373-S SNP C -> T AC=2;AN=184;BQB=0.979767;DP=3149;DP4=1436,1606,8,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.27536e-16;MQSB=0.999152;RPB=0.37817;SGB=121.091;VDB=0.129509;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.8:23816216 chr08:023816216 0 W/23816216-23816216 FN1015-S Single Base Substitution A-G INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1754-S.SNP.8:23817710 chr08:023817710 0 W/23817710-23817710 FN1754-S SNP A -> G AC=2;AN=188;BQB=0.0400916;DP=3659;DP4=1847,1746,27,25;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.2001e-10;MQSB=0.154083;RPB=0.371148;SGB=-334.669;VDB=0.187378;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.8:23822642 chr08:023822642 0 W/23822642-23822642 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.913547;DP=2309;DP4=1089,1129,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.40821e-07;MQSB=0.845988;RPB=0.701226;SGB=27.9928;VDB=0.847359;EFF=INTRON(MODIFIER||||555|LOC_Os08g37600|protein_coding|CODING|LOC_Os08g37600.1|2|1) FN4184-S.SNP.8:23822658 chr08:023822658 0 W/23822658-23822658 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.857139;DP=2374;DP4=1140,1166,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.37053e-06;MQSB=0.919921;RPB=0.855749;SGB=30.1021;VDB=0.158094;EFF=INTRON(MODIFIER||||555|LOC_Os08g37600|protein_coding|CODING|LOC_Os08g37600.1|2|1) FN1317-S.SNP.8:23826683 chr08:023826683 0 W/23826683-23826683 FN1317-S Single Base Substitution G-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN3766-S.SNP.8:23840026 chr08:023840026 0 W/23840026-23840026 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.387093;DP=2937;DP4=1740,1095,9,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22152e-05;MQSB=0.962788;RPB=0.657518;SGB=25.439;VDB=0.948604;EFF=INTRON(MODIFIER||||909|LOC_Os08g37610|protein_coding|CODING|LOC_Os08g37610.1|11|1),INTRON(MODIFIER||||793|LOC_Os08g37610|protein_coding|CODING|LOC_Os08g37610.2|11|1) FN-262.SNP.8:23846335 chr08:023846335 0 W/23846335-23846335 FN-262 Single Base Substitution A-G INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1046-S.SNP.8:23848019 chr08:023848019 0 W/23848019-23848019 FN1046-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN-341.SNP.8:23850776 chr08:023850776 0 W/23850776-23850776 FN-341 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN_935-1.SNP.8:23851284 chr08:023851284 0 W/23851284-23851284 FN_935-1 Single Base Substitution G-A Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN1280-S.SNP.8:23856392 chr08:023856392 0 W/23856392-23856392 FN1280-S Single Base Substitution A-T INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2381.SNP.8:23862013 chr08:023862013 0 W/23862013-23862013 FN2381 SNP G -> T AC=1;AN=192;BQB=0.890116;DP=5057;DP4=2528,2200,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.42764e-17;MQSB=0.867975;RPB=0.447935;SGB=64.8148;VDB=0.737478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.8:23862015 chr08:023862015 0 W/23862015-23862015 FN2381 SNP A -> T AC=1;AN=192;BQB=0.957769;DP=5045;DP4=2495,2202,19,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.39341e-21;MQSB=0.829123;RPB=0.729922;SGB=-4.04606;VDB=0.716558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.8:23869266 chr08:023869266 0 W/23869266-23869266 FN1423-S Single Base Substitution T-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1314-S.SNP.8:23871749 chr08:023871749 0 W/23871749-23871749 FN1314-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN1314-S.SNP.8:23871750 chr08:023871750 0 W/23871750-23871750 FN1314-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-217.SNP.8:23872403 chr08:023872403 0 W/23872403-23872403 FN-217 Single Base Substitution G-C UTR_3_PRIME HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1641-S.SNP.8:23879497 chr08:023879497 0 W/23879497-23879497 FN1641-S Single Base Substitution G-A INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN4180-S.SNP.8:23881805 chr08:023881805 0 W/23881805-23881805 FN4180-S SNP C -> A AC=1;AN=170;BQB=0.963998;DP=2711;DP4=1260,1362,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.92899e-09;MQSB=0.939125;RPB=0.729557;SGB=52.3148;VDB=0.216243;EFF=INTRON(MODIFIER||||435|LOC_Os08g37710|protein_coding|CODING|LOC_Os08g37710.1|1|1) FN4180-S.SNP.8:23881806 chr08:023881806 0 W/23881806-23881806 FN4180-S SNP T -> A AC=1;AN=170;BQB=0.952172;DP=2716;DP4=1266,1360,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.03161e-08;MQSB=0.857642;RPB=0.982933;SGB=52.3148;VDB=0.312312;EFF=INTRON(MODIFIER||||435|LOC_Os08g37710|protein_coding|CODING|LOC_Os08g37710.1|1|1) FN3613-S.SNP.8:23890783 chr08:023890783 0 W/23890783-23890783 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.962113;DP=2675;DP4=1145,1439,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.7675e-10;MQSB=0.881133;RPB=0.81878;SGB=67.3108;VDB=0.589592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.8:23908046 chr08:023908046 0 W/23908046-23908046 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.576723;DP=5173;DP4=2521,2410,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03083e-14;MQSB=0.839991;RPB=0.445388;SGB=79.9264;VDB=0.580367;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.8:23910702 chr08:023910702 0 W/23910702-23910702 FN-61 Single Base Substitution A-T INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1179-S.SNP.8:23920181 chr08:023920181 0 W/23920181-23920181 FN1179-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN3294-S.SNP.8:23922338 chr08:023922338 0 W/23922338-23922338 FN3294-S SNP T -> A AC=1;AN=184;BQB=0.888577;DP=3173;DP4=1066,1932,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.29818e-07;MQSB=0.861607;RPB=0.668749;SGB=13.188;VDB=0.650903;EFF=UTR_3_PRIME(MODIFIER||6||413|LOC_Os08g37760|protein_coding|CODING|LOC_Os08g37760.1|1|1) FN1196-S.SNP.8:23925578 chr08:023925578 0 W/23925578-23925578 FN1196-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN3433-S.SNP.8:23926849 chr08:023926849 0 W/23926849-23926849 FN3433-S SNP T -> C AC=1;AN=184;BQB=0.989911;DP=3052;DP4=1371,1583,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.43099e-05;MQSB=0.995414;RPB=0.999562;SGB=30.6558;VDB=0.566336;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.8:23929179 chr08:023929179 0 W/23929179-23929179 FN2377 SNP C -> T AC=1;AN=192;BQB=0.0974015;DP=5109;DP4=2434,2358,19,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.62161e-15;MQSB=0.88206;RPB=0.374314;SGB=29.2557;VDB=0.0342503;EFF=INTRON(MODIFIER||||812|LOC_Os08g37780|protein_coding|CODING|LOC_Os08g37780.1|11|1),INTRON(MODIFIER||||684|LOC_Os08g37780|protein_coding|CODING|LOC_Os08g37780.2|11|1) FN-172.SNP.8:23941551 chr08:023941551 0 W/23941551-23941551 FN-172 Single Base Substitution G-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN3788-S.SNP.8:23941647 chr08:023941647 0 W/23941647-23941647 FN3788-S SNP A -> G AC=1;AN=190;BQB=0.217223;DP=3252;DP4=1610,1494,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000214738;MQSB=0.20894;RPB=0.980163;SGB=43.2083;VDB=0.793675;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.8:23950530 chr08:023950530 0 W/23950530-23950530 FN920-S Single Base Substitution C-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN1703-S.SNP.8:23950858 chr08:023950858 0 W/23950858-23950858 FN1703-S SNP G -> A AC=1;AN=188;BQB=0.843028;DP=2147;DP4=1061,1068,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42467e-05;MQSB=0.928089;RPB=0.925494;SGB=18.2682;VDB=0.516656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.8:23953267 chr08:023953267 0 W/23953267-23953267 FN2562-S SNP T -> C AC=1;AN=198;BQB=0.910285;DP=4145;DP4=1864,2072,16,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.36589e-15;MQSB=0.985374;RPB=0.999211;SGB=104.861;VDB=0.406214;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.8:23954331 chr08:023954331 0 W/23954331-23954331 FN469-S Single Base Substitution A-G INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN4049-S.SNP.8:23959801 chr08:023959801 0 W/23959801-23959801 FN4049-S SNP A -> T AC=1;AN=168;BQB=0.992234;DP=2487;DP4=1226,1170,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.4884e-08;MQSB=0.928054;RPB=0.680122;SGB=47.7421;VDB=0.454942;EFF=INTRON(MODIFIER||||307|LOC_Os08g37820|protein_coding|CODING|LOC_Os08g37820.1|4|1) FN4049-S.SNP.8:23959802 chr08:023959802 0 W/23959802-23959802 FN4049-S SNP A -> T AC=1;AN=168;BQB=0.806966;DP=2491;DP4=1147,1177,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04801e-07;MQSB=0.945707;RPB=0.724337;SGB=34.748;VDB=0.332906;EFF=INTRON(MODIFIER||||307|LOC_Os08g37820|protein_coding|CODING|LOC_Os08g37820.1|4|1) FN2458.SNP.8:23965478 chr08:023965478 0 W/23965478-23965478 FN2458 SNP G -> A AC=2;AN=200;BQB=0.945875;DP=4204;DP4=1949,1916,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.58724e-16;MQSB=0.436602;RPB=0.941026;SGB=141.763;VDB=0.194642;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.8:23965782 chr08:023965782 0 W/23965782-23965782 FN1113-S Single Base Substitution A-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN4229-S.SNP.8:23982985 chr08:023982985 0 W/23982985-23982985 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.786576;DP=1990;DP4=1042,866,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.61489e-05;MQSB=5.8924e-07;RPB=0.975424;SGB=-15.6616;VDB=0.99102;EFF=INTRON(MODIFIER||||267|LOC_Os08g37860|protein_coding|CODING|LOC_Os08g37860.1|1|1) FN-128.SNP.8:23986970 chr08:023986970 0 W/23986970-23986970 FN-128 Single Base Substitution A-T INTERGENIC HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN3492-S.SNP.8:23987667 chr08:023987667 0 W/23987667-23987667 FN3492-S SNP A -> G AC=1;AN=184;BQB=0.99462;DP=2778;DP4=1171,1435,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59078e-08;MQSB=0.445999;RPB=0.965329;SGB=35.7479;VDB=0.951016;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.8:23987722 chr08:023987722 0 W/23987722-23987722 FN369-S Single Base Substitution G-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN2646-S.SNP.8:23993810 chr08:023993810 0 W/23993810-23993810 FN2646-S SNP C -> G AC=1;AN=200;BQB=0.95411;DP=4694;DP4=2408,2034,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.55556e-10;MQSB=0.993647;RPB=0.999014;SGB=24.2746;VDB=0.517146;EFF=INTRON(MODIFIER||||330|LOC_Os08g37874|protein_coding|CODING|LOC_Os08g37874.1|5|1),INTRON(MODIFIER||||206|LOC_Os08g37874|protein_coding|CODING|LOC_Os08g37874.3|5|1),INTRON(MODIFIER||||280|LOC_Os08g37874|protein_coding|CODING|LOC_Os08g37874.2|5|1) FN1293-S.SNP.8:23996410 chr08:023996410 0 W/23996410-23996410 FN1293-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN3858-S.SNP.8:24007976 chr08:024007976 0 W/24007976-24007976 FN3858-S SNP G -> A AC=2;AN=158;BQB=0.903817;DP=2627;DP4=1417,1116,13,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.23852e-10;MQSB=0.975587;RPB=0.998498;SGB=86.3921;VDB=0.58372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A699T|729|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A699T|729|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A699T|729|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A698T|728|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A668T|698|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.5|5|1),INTRON(MODIFIER||||687|LOC_Os08g37904|protein_coding|CODING|LOC_Os08g37904.6|3|1) FN960-S.SNP.8:24012141 chr08:024012141 0 W/24012141-24012141 FN960-S Single Base Substitution G-T INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1656-S.SNP.8:24029328 chr08:024029328 0 W/24029328-24029328 FN1656-S Single Base Substitution C-T INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN1276-S.SNP.8:24043735 chr08:024043735 0 W/24043735-24043735 FN1276-S Single Base Substitution T-C INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN448-S.SNP.8:24052159 chr08:024052159 0 W/24052159-24052159 FN448-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g37970 MYB family transcription factor, putative, expressed SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1136-19-S.SNP.8:24052391 chr08:024052391 0 W/24052391-24052391 FN1136-19-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os08g37970 MYB family transcription factor, putative, expressed SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1345-S.SNP.8:24053416 chr08:024053416 0 W/24053416-24053416 FN1345-S Single Base Substitution G-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN584-S.SNP.8:24054166 chr08:024054166 0 W/24054166-24054166 FN584-S Single Base Substitution T-G INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN506-S.SNP.8:24057783 chr08:024057783 0 W/24057783-24057783 FN506-S Single Base Substitution C-A INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN1175-S.SNP.8:24058962 chr08:024058962 0 W/24058962-24058962 FN1175-S Single Base Substitution A-G INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4011-S.SNP.8:24062886 chr08:024062886 0 W/24062886-24062886 FN4011-S SNP A -> T AC=1;AN=168;BQB=0.994028;DP=1455;DP4=1202,190,4,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000783311;MQSB=0.000109354;RPB=0.605464;SGB=21.16;VDB=0.080746;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.8:24064985 chr08:024064985 0 W/24064985-24064985 FN_822-5-1 Single Base Substitution C-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2461.SNP.8:24067749 chr08:024067749 0 W/24067749-24067749 FN2461 SNP C -> G AC=2;AN=200;BQB=0.89833;DP=3755;DP4=1721,1618,12,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.98911e-12;MQSB=0.705831;RPB=0.931653;SGB=118.737;VDB=0.966157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S173R|189|LOC_Os08g37980|protein_coding|CODING|LOC_Os08g37980.1|3|1) FN2545-S.SNP.8:24070961 chr08:024070961 0 W/24070961-24070961 FN2545-S SNP A -> C AC=1;AN=198;BQB=0.893201;DP=4101;DP4=1855,1914,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.43773e-06;MQSB=0.588403;RPB=0.416046;SGB=43.7442;VDB=0.0800988;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.8:24073568 chr08:024073568 0 W/24073568-24073568 FN-179 Single Base Substitution G-A UTR_5_PRIME HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-179.SNP.8:24073570 chr08:024073570 0 W/24073570-24073570 FN-179 Single Base Substitution T-A UTR_5_PRIME HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-216.SNP.8:24086378 chr08:024086378 0 W/24086378-24086378 FN-216 Single Base Substitution G-A INTERGENIC HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN1660-S.SNP.8:24087856 chr08:024087856 0 W/24087856-24087856 FN1660-S Single Base Substitution G-A INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1660-S.SNP.8:24087857 chr08:024087857 0 W/24087857-24087857 FN1660-S Single Base Substitution C-A INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2475.SNP.8:24088163 chr08:024088163 0 W/24088163-24088163 FN2475 SNP G -> A AC=1;AN=200;BQB=0.872029;DP=5016;DP4=2461,2265,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.64015e-10;MQSB=0.996815;RPB=0.849577;SGB=37.3004;VDB=0.62333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.8:24089478 chr08:024089478 0 W/24089478-24089478 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.999755;DP=4586;DP4=2076,2228,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62657e-13;MQSB=0.977966;RPB=0.571092;SGB=79.9264;VDB=0.894124;EFF=INTERGENIC(MODIFIER||||||||||1) FN-102.SNP.8:24092392 chr08:024092392 0 W/24092392-24092392 FN-102 Single Base Substitution C-G INTRON HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2408.SNP.8:24099442 chr08:024099442 0 W/24099442-24099442 FN2408 SNP C -> T AC=1;AN=200;BQB=0.834131;DP=4895;DP4=1961,2596,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51079e-07;MQSB=0.57541;RPB=0.999238;SGB=54.2646;VDB=0.959399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.8:24110107 chr08:024110107 0 W/24110107-24110107 FN2648-S SNP T -> C AC=1;AN=200;BQB=0.324156;DP=4550;DP4=2006,2191,24,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0008e-19;MQSB=0.314487;RPB=0.907441;SGB=84.1935;VDB=0.491857;EFF=INTRON(MODIFIER||||407|LOC_Os08g38050|protein_coding|CODING|LOC_Os08g38050.1|1|1) FN2120-S.SNP.8:24138976 chr08:024138976 0 W/24138976-24138976 FN2120-S SNP C -> T AC=2;AN=168;BQB=0.901633;DP=1995;DP4=1017,849,7,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.36592e-10;MQSB=0.810582;RPB=0.336284;SGB=65.4653;VDB=0.0742235;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.8:24149962 chr08:024149962 0 W/24149962-24149962 FN718-S Single Base Substitution G-A INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1258-S.SNP.8:24152418 chr08:024152418 0 W/24152418-24152418 FN1258-S Single Base Substitution G-C INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3332-S.SNP.8:24152919 chr08:024152919 0 W/24152919-24152919 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.85893;DP=3299;DP4=1825,1358,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000188874;MQSB=0.906413;RPB=0.993143;SGB=42.7914;VDB=0.118074;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.8:24155265 chr08:024155265 0 W/24155265-24155265 FN2600-S SNP G -> C AC=1;AN=198;BQB=0.567205;DP=4269;DP4=2196,1891,22,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.45516e-20;MQSB=0.991145;RPB=0.567476;SGB=104.861;VDB=0.0410843;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.8:24165323 chr08:024165323 0 W/24165323-24165323 FN772-S Single Base Substitution C-T INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2469.SNP.8:24168038 chr08:024168038 0 W/24168038-24168038 FN2469 SNP G -> C AC=2;AN=200;BQB=0.399314;DP=3158;DP4=1273,1523,11,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=3.01652e-06;MQSB=3.83954e-06;RPB=0.874822;SGB=72.7161;VDB=0.676171;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L381V|463|LOC_Os08g38160|protein_coding|CODING|LOC_Os08g38160.1|1|1) FN2381.SNP.8:24169046 chr08:024169046 0 W/24169046-24169046 FN2381 SNP C -> G AC=1;AN=192;BQB=0.999922;DP=3998;DP4=2046,1380,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000250125;MQB=8.58419e-10;MQSB=2.86675e-13;RPB=0.920983;SGB=-9.68954;VDB=0.771476;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G45R|463|LOC_Os08g38160|protein_coding|CODING|LOC_Os08g38160.1|1|1) FN1630-S.SNP.8:24169735 chr08:024169735 0 W/24169735-24169735 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1419-S.SNP.8:24177968 chr08:024177968 0 W/24177968-24177968 FN1419-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-168.SNP.8:24178719 chr08:024178719 0 W/24178719-24178719 FN-168 Single Base Substitution T-A INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN672-S.SNP.8:24203181 chr08:024203181 0 W/24203181-24203181 FN672-S Single Base Substitution G-A INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN580-S.SNP.8:24203462 chr08:024203462 0 W/24203462-24203462 FN580-S Single Base Substitution C-T INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1732-S.SNP.8:24221410 chr08:024221410 0 W/24221410-24221410 FN1732-S SNP G -> A AC=1;AN=188;BQB=0.730554;DP=3049;DP4=1201,1820,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1492e-05;MQSB=0.90439;RPB=0.822863;SGB=-17.1729;VDB=0.647518;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.8:24224132 chr08:024224132 0 W/24224132-24224132 FN553-S Single Base Substitution G-T INTRON HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-225.SNP.8:24225596 chr08:024225596 0 W/24225596-24225596 FN-225 Single Base Substitution A-T INTRON HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN2774-S.SNP.8:24231227 chr08:024231227 0 W/24231227-24231227 FN2774-S SNP T -> A AC=1;AN=198;BQB=0.941785;DP=3554;DP4=1666,1560,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.55273e-10;MQSB=0.934768;RPB=0.849993;SGB=60.4858;VDB=0.636144;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.8:24232607 chr08:024232607 0 W/24232607-24232607 FN-199 Single Base Substitution A-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN580-S.SNP.8:24236659 chr08:024236659 0 W/24236659-24236659 FN580-S Single Base Substitution C-T INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN772-S.SNP.8:24243187 chr08:024243187 0 W/24243187-24243187 FN772-S Single Base Substitution C-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3553-S.SNP.8:24247599 chr08:024247599 0 W/24247599-24247599 FN3553-S SNP T -> A AC=2;AN=188;BQB=0.708302;DP=3384;DP4=1589,1676,14,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000886525;MQB=5.66375e-19;MQSB=0.96893;RPB=0.987368;SGB=153.475;VDB=0.734545;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.8:24257743 chr08:024257743 0 W/24257743-24257743 FN695-S Single Base Substitution T-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN695-S.SNP.8:24257745 chr08:024257745 0 W/24257745-24257745 FN695-S Single Base Substitution G-A INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1543-S.SNP.8:24261452 chr08:024261452 0 W/24261452-24261452 FN1543-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os08g38300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1543-S.SNP.8:24261455 chr08:024261455 0 W/24261455-24261455 FN1543-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN879-S.SNP.8:24267428 chr08:024267428 0 W/24267428-24267428 FN879-S Single Base Substitution T-C INTRON HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN3433-S.SNP.8:24272759 chr08:024272759 0 W/24272759-24272759 FN3433-S SNP T -> A AC=1;AN=184;BQB=0.991831;DP=2775;DP4=1416,1264,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74532e-06;MQSB=0.972369;RPB=0.514568;SGB=25.1826;VDB=0.140618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.8:24277191 chr08:024277191 0 W/24277191-24277191 FN2147-S SNP T -> A AC=1;AN=168;BQB=0.00109819;DP=3680;DP4=2110,1529,18,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.937355;MQSB=0.752449;RPB=0.268142;SGB=-154.912;VDB=0.133364;EFF=UTR_3_PRIME(MODIFIER||65||594|LOC_Os08g38320|protein_coding|CODING|LOC_Os08g38320.1|3|1),UTR_3_PRIME(MODIFIER||65||594|LOC_Os08g38320|protein_coding|CODING|LOC_Os08g38320.2|3|1),UTR_3_PRIME(MODIFIER||65||594|LOC_Os08g38320|protein_coding|CODING|LOC_Os08g38320.3|3|1) FN2532-S.SNP.8:24278158 chr08:024278158 0 W/24278158-24278158 FN2532-S SNP C -> G AC=1;AN=198;BQB=0.983901;DP=4145;DP4=1929,1995,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.62515e-13;MQSB=0.950647;RPB=0.97043;SGB=18.9201;VDB=0.18635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.8:24278917 chr08:024278917 0 W/24278917-24278917 FN2557-S SNP T -> A AC=2;AN=198;BQB=0.971004;DP=4181;DP4=1673,2320,11,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.20015e-16;MQSB=0.542085;RPB=0.450739;SGB=57.8907;VDB=0.411752;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.8:24286990 chr08:024286990 0 W/24286990-24286990 FN3464-S SNP A -> G AC=1;AN=184;BQB=0.923597;DP=3244;DP4=1542,1547,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.05714e-07;MQSB=0.866671;RPB=0.847764;SGB=42.7914;VDB=0.304631;EFF=INTRON(MODIFIER||||355|LOC_Os08g38350|protein_coding|CODING|LOC_Os08g38350.1|1|1) FN2339.SNP.8:24303934 chr08:024303934 0 W/24303934-24303934 FN2339 SNP T -> C AC=1;AN=192;BQB=0.985805;DP=5122;DP4=2345,2567,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.6421e-16;MQSB=0.956483;RPB=0.72416;SGB=89.6809;VDB=0.190075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.8:24303934 chr08:024303934 0 W/24303934-24303934 FN2594-S SNP T -> C AC=2;AN=198;BQB=0.968139;DP=4381;DP4=1948,2225,17,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.01366e-19;MQSB=0.918838;RPB=0.964647;SGB=73.4614;VDB=0.361674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.8:24303934 chr08:024303934 0 W/24303934-24303934 FN3766-S SNP T -> C AC=2;AN=190;BQB=0.939327;DP=2959;DP4=1326,1510,11,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.06031e-16;MQSB=0.970854;RPB=0.503782;SGB=82.301;VDB=0.0369826;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.8:24318386 chr08:024318386 0 W/24318386-24318386 FN1241-S Single Base Substitution G-A INTRON HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2713-S.SNP.8:24320993 chr08:024320993 0 W/24320993-24320993 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.884516;DP=4107;DP4=1998,1844,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91071e-05;MQSB=0.776995;RPB=0.774873;SGB=35.8441;VDB=0.883436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.8:24321868 chr08:024321868 0 W/24321868-24321868 FN2680-S SNP A -> C AC=1;AN=200;BQB=0.956824;DP=4900;DP4=2188,2426,11,16;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=1.69913e-08;MQSB=0.00139872;RPB=0.126401;SGB=87.1368;VDB=0.0466905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.8:24324801 chr08:024324801 0 W/24324801-24324801 FN3562-S SNP C -> T AC=1;AN=188;BQB=0.917002;DP=3042;DP4=1550,1406,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.84722e-13;MQSB=0.743929;RPB=0.646177;SGB=71.4172;VDB=0.287982;EFF=INTRON(MODIFIER||||117|LOC_Os08g38430|protein_coding|CODING|LOC_Os08g38430.1|1|1) FN3578-S.SNP.8:24333367 chr08:024333367 0 W/24333367-24333367 FN3578-S SNP T -> C AC=1;AN=188;BQB=0.992171;DP=3549;DP4=1673,1520,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.11453e-11;MQSB=0.983797;RPB=0.184906;SGB=-38.278;VDB=0.0357975;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.8:24349086 chr08:024349086 0 W/24349086-24349086 FN497-S Single Base Substitution A-G INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3692-S.SNP.8:24364422 chr08:024364422 0 W/24364422-24364422 FN3692-S SNP T -> A AC=2;AN=190;BQB=0.921897;DP=2690;DP4=929,1513,9,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78929e-08;MQSB=0.833938;RPB=0.778104;SGB=7.21887;VDB=0.636116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V23D|101|LOC_Os08g38510|protein_coding|CODING|LOC_Os08g38510.1|1|1) FN1284-S.SNP.8:24365925 chr08:024365925 0 W/24365925-24365925 FN1284-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN-285.SNP.8:24366231 chr08:024366231 0 W/24366231-24366231 FN-285 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g38520 OsFBX302 - F-box domain containing protein, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2291.SNP.8:24366915 chr08:024366915 0 W/24366915-24366915 FN2291 SNP A -> G AC=1;AN=192;BQB=0.587355;DP=4811;DP4=2316,2056,20,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.42243e-15;MQSB=0.658932;RPB=0.92683;SGB=37.0774;VDB=0.657612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.8:24372104 chr08:024372104 0 W/24372104-24372104 FN2706-S SNP T -> G AC=2;AN=200;BQB=0.442282;DP=5276;DP4=2425,2535,18,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03581e-17;MQSB=0.991994;RPB=0.997768;SGB=119.583;VDB=0.779959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.8:24372238 chr08:024372238 0 W/24372238-24372238 FN1035-S Single Base Substitution T-C INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1647-S.SNP.8:24374239 chr08:024374239 0 W/24374239-24374239 FN1647-S Single Base Substitution C-T INTRON HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN-186.SNP.8:24381402 chr08:024381402 0 W/24381402-24381402 FN-186 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g38560 receptor-like protein kinase 2 precursor, putative, expressed SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3746-S.SNP.8:24382044 chr08:024382044 0 W/24382044-24382044 FN3746-S SNP T -> A AC=1;AN=190;BQB=0.229933;DP=2765;DP4=935,1548,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0232273;MQSB=0.781445;RPB=0.999569;SGB=13.4442;VDB=0.0569844;EFF=INTRON(MODIFIER||||1104|LOC_Os08g38560|protein_coding|CODING|LOC_Os08g38560.1|1|1) FN3819-S.SNP.8:24401871 chr08:024401871 0 W/24401871-24401871 FN3819-S SNP A -> G AC=1;AN=190;BQB=0.98322;DP=2525;DP4=1191,1241,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61066e-09;MQSB=0.513936;RPB=0.548223;SGB=50.3161;VDB=0.0313816;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.8:24409730 chr08:024409730 0 W/24409730-24409730 FN821-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g38620 expressed protein SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN1746-S.SNP.8:24424482 chr08:024424482 0 W/24424482-24424482 FN1746-S SNP T -> C AC=2;AN=188;BQB=0.258456;DP=3300;DP4=2218,1013,31,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.15386e-18;MQSB=0.904409;RPB=0.520512;SGB=-318.299;VDB=0.384109;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN-68 Single Base Substitution C-A INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1006-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN1006-S Single Base Substitution C-A INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2395.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN2395 SNP C -> A AC=2;AN=200;BQB=0.706244;DP=4967;DP4=2064,2537,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.30423e-20;MQSB=0.0258912;RPB=0.901947;SGB=102.43;VDB=0.64871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN2579-S SNP C -> A AC=2;AN=198;BQB=0.942119;DP=4450;DP4=1799,2304,30,47;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.03135e-37;MQSB=0.0229592;RPB=0.0661847;SGB=126.53;VDB=0.57942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN2705-S SNP C -> A AC=2;AN=200;BQB=0.946585;DP=5065;DP4=2134,2614,23,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.54764e-30;MQSB=0.109546;RPB=0.903857;SGB=-49.5294;VDB=0.521579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN3297-S SNP C -> A AC=2;AN=184;BQB=0.992908;DP=2796;DP4=1156,1529,10,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.20673e-12;MQSB=0.0460765;RPB=0.870859;SGB=85.0529;VDB=0.110235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN3919-S SNP C -> A AC=2;AN=158;BQB=0.681431;DP=2386;DP4=918,1363,7,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.58671e-13;MQSB=0.00429107;RPB=0.936159;SGB=94.7235;VDB=0.252478;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN487-S Single Base Substitution C-A INTERGENIC HOMO SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN_827-1.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 FN_827-1 Single Base Substitution C-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. W443-5-1-3.SNP.8:24435829 chr08:024435829 0 W/24435829-24435829 W443-5-1-3 Single Base Substitution C-A INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3990-S.SNP.8:24435832 chr08:024435832 0 W/24435832-24435832 FN3990-S SNP A -> G AC=1;AN=168;BQB=0.996696;DP=2512;DP4=962,1454,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.92478e-07;MQSB=0.0131742;RPB=0.77968;SGB=61.0344;VDB=0.939155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.8:24438932 chr08:024438932 0 W/24438932-24438932 FN3512-S SNP T -> C AC=2;AN=188;BQB=0.703629;DP=2730;DP4=1138,1454,19,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.54935e-20;MQSB=0.93076;RPB=0.206496;SGB=36.4041;VDB=0.13727;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.8:24446542 chr08:024446542 0 W/24446542-24446542 FN857-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2629-S.SNP.8:24446959 chr08:024446959 0 W/24446959-24446959 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.869077;DP=4597;DP4=2039,2242,10,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.04696e-11;MQSB=6.73342e-08;RPB=0.815278;SGB=69.1109;VDB=0.204139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.8:24451454 chr08:024451454 0 W/24451454-24451454 FN2226-S SNP G -> T AC=2;AN=190;BQB=0.81389;DP=5062;DP4=2432,2330,24,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.32694e-27;MQSB=0.998067;RPB=0.987953;SGB=58.4968;VDB=0.482392;EFF=INTRON(MODIFIER||||580|LOC_Os08g38690|protein_coding|CODING|LOC_Os08g38690.1|7|1) FN3411-S.SNP.8:24461291 chr08:024461291 0 W/24461291-24461291 FN3411-S SNP G -> C AC=1;AN=184;BQB=0.967062;DP=2905;DP4=1669,1174,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37592e-05;MQSB=0.948366;RPB=0.994663;SGB=25.1826;VDB=0.534486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.8:24461733 chr08:024461733 0 W/24461733-24461733 FN2797-S SNP C -> A AC=1;AN=198;BQB=0.780142;DP=3842;DP4=1980,1612,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.08764e-16;MQSB=0.875591;RPB=0.966092;SGB=90.4807;VDB=0.893195;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.8:24464169 chr08:024464169 0 W/24464169-24464169 FN1640-S Single Base Substitution G-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN3547-S.SNP.8:24471337 chr08:024471337 0 W/24471337-24471337 FN3547-S SNP G -> T AC=1;AN=188;BQB=0.921145;DP=2915;DP4=1857,980,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04319e-09;MQSB=0.288471;RPB=0.878433;SGB=76.2387;VDB=0.561158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.8:24486462 chr08:024486462 0 W/24486462-24486462 FN2484 SNP C -> A AC=1;AN=200;BQB=0.912273;DP=4764;DP4=2123,2357,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71185e-16;MQSB=0.964479;RPB=0.267072;SGB=25.5416;VDB=0.219549;EFF=INTERGENIC(MODIFIER||||||||||1) FN1411-S.SNP.8:24487636 chr08:024487636 0 W/24487636-24487636 FN1411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN1133-S.SNP.8:24495326 chr08:024495326 0 W/24495326-24495326 FN1133-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g38740 glycosyl transferase 8 domain containing protein, putative, expressed SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN3824-S.SNP.8:24497099 chr08:024497099 0 W/24497099-24497099 FN3824-S SNP A -> T AC=2;AN=190;BQB=0.936459;DP=2582;DP4=1263,1185,14,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.10443e-21;MQSB=0.836892;RPB=1;SGB=74.7373;VDB=0.633168;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K338M|726|LOC_Os08g38740|protein_coding|CODING|LOC_Os08g38740.1|7|1) FN3815-S.SNP.8:24500628 chr08:024500628 0 W/24500628-24500628 FN3815-S SNP C -> A AC=1;AN=190;BQB=0.986569;DP=2377;DP4=1087,1194,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00101017;MQSB=0.814934;RPB=0.913803;SGB=14.7784;VDB=0.629475;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caA|H37Q|149|LOC_Os08g38750|protein_coding|CODING|LOC_Os08g38750.1|1|1) FN3309-S.SNP.8:24503083 chr08:024503083 0 W/24503083-24503083 FN3309-S SNP C -> T AC=2;AN=184;BQB=0.841089;DP=3047;DP4=1452,1464,11,13;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00853298;MQB=4.45878e-05;MQSB=0.271074;RPB=0.98774;SGB=103.004;VDB=0.922315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.8:24503083 chr08:024503083 0 W/24503083-24503083 FN3422-S SNP C -> T AC=1;AN=184;BQB=0.964652;DP=2759;DP4=1335,1334,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.007249;MQB=0.00480733;MQSB=0.832603;RPB=0.907532;SGB=25.1826;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.8:24503083 chr08:024503083 0 W/24503083-24503083 FN678-S Single Base Substitution C-T INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN963-S.SNP.8:24503083 chr08:024503083 0 W/24503083-24503083 FN963-S Single Base Substitution C-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3957-S.SNP.8:24503217 chr08:024503217 0 W/24503217-24503217 FN3957-S SNP A -> G AC=1;AN=168;BQB=0.822078;DP=2553;DP4=1235,1129,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.34049e-07;MQSB=0.140377;RPB=0.998222;SGB=27.0464;VDB=0.131671;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.8:24522943 chr08:024522943 0 W/24522943-24522943 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.995408;DP=2960;DP4=1328,1544,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03617e-09;MQSB=0.960288;RPB=0.470634;SGB=71.3514;VDB=0.583034;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F39|388|LOC_Os08g38790|protein_coding|CODING|LOC_Os08g38790.1|1|1) FN2094-S.SNP.8:24523730 chr08:024523730 0 W/24523730-24523730 FN2094-S SNP T -> A AC=2;AN=168;BQB=0.681106;DP=3663;DP4=1602,1967,17,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.68876e-21;MQSB=0.821508;RPB=0.902363;SGB=-53.1653;VDB=0.205208;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.8:24530469 chr08:024530469 0 W/24530469-24530469 FN673-S Single Base Substitution A-C INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN-231.SNP.8:24532370 chr08:024532370 0 W/24532370-24532370 FN-231 Single Base Substitution A-C INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN4344-S.SNP.8:24535622 chr08:024535622 0 W/24535622-24535622 FN4344-S SNP C -> T AC=2;AN=170;BQB=0.531508;DP=2727;DP4=1260,1305,11,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.78358e-10;MQSB=0.825273;RPB=0.433712;SGB=70.0854;VDB=0.0374879;EFF=INTERGENIC(MODIFIER||||||||||1) FN-63.SNP.8:24536944 chr08:024536944 0 W/24536944-24536944 FN-63 Single Base Substitution A-G INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1423-S.SNP.8:24544420 chr08:024544420 0 W/24544420-24544420 FN1423-S Single Base Substitution G-A INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4036-S.SNP.8:24545999 chr08:024545999 0 W/24545999-24545999 FN4036-S SNP A -> T AC=1;AN=168;BQB=0.927492;DP=2805;DP4=1162,1459,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=5.41521e-09;MQSB=0.331414;RPB=0.59094;SGB=51.902;VDB=0.191244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.8:24554793 chr08:024554793 0 W/24554793-24554793 FN3846-S SNP A -> T AC=1;AN=190;BQB=0.990253;DP=3164;DP4=1116,1943,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26013e-10;MQSB=0.908749;RPB=0.151785;SGB=76.4186;VDB=0.00943868;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.8:24555785 chr08:024555785 0 W/24555785-24555785 FN1299-S Single Base Substitution T-C INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN3530-S.SNP.8:24555854 chr08:024555854 0 W/24555854-24555854 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.613393;DP=3347;DP4=1682,1430,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.17407e-12;MQSB=0.576204;RPB=0.830669;SGB=60.7873;VDB=0.820645;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.8:24575733 chr08:024575733 0 W/24575733-24575733 FN4063-S SNP G -> A AC=1;AN=168;BQB=0.940946;DP=3343;DP4=1766,1477,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.55792e-09;MQSB=0.980314;RPB=0.998074;SGB=56.6036;VDB=0.0701362;EFF=UTR_5_PRIME(MODIFIER||193||432|LOC_Os08g38880|protein_coding|CODING|LOC_Os08g38880.1|1|1),UTR_5_PRIME(MODIFIER||193||429|LOC_Os08g38880|protein_coding|CODING|LOC_Os08g38880.2|1|1),UTR_5_PRIME(MODIFIER||753||362|LOC_Os08g38880|protein_coding|CODING|LOC_Os08g38880.4|1|1),UTR_5_PRIME(MODIFIER||753||362|LOC_Os08g38880|protein_coding|CODING|LOC_Os08g38880.5|1|1) FN-125.SNP.8:24580127 chr08:024580127 0 W/24580127-24580127 FN-125 Single Base Substitution C-T INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN702-S.SNP.8:24587643 chr08:024587643 0 W/24587643-24587643 FN702-S Single Base Substitution C-A INTRON HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1072-S.SNP.8:24591174 chr08:024591174 0 W/24591174-24591174 FN1072-S Single Base Substitution T-C INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3444-S.SNP.8:24594507 chr08:024594507 0 W/24594507-24594507 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.931404;DP=3325;DP4=1878,1379,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.37948e-06;MQSB=0.948697;RPB=0.898943;SGB=21.6609;VDB=0.367755;EFF=INTRON(MODIFIER||||292|LOC_Os08g38910|protein_coding|CODING|LOC_Os08g38910.1|2|1),INTRON(MODIFIER||||292|LOC_Os08g38910|protein_coding|CODING|LOC_Os08g38910.2|1|1),INTRON(MODIFIER||||203|LOC_Os08g38910|protein_coding|CODING|LOC_Os08g38910.3|1|1) FN460-S.SNP.8:24595340 chr08:024595340 0 W/24595340-24595340 FN460-S Single Base Substitution G-A INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2096-S.SNP.8:24595415 chr08:024595415 0 W/24595415-24595415 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.273686;DP=2631;DP4=1425,1120,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27672e-07;MQSB=0.977208;RPB=0.467477;SGB=-38.9357;VDB=0.425957;EFF=INTRON(MODIFIER||||292|LOC_Os08g38910|protein_coding|CODING|LOC_Os08g38910.1|1|1) FN899-S.SNP.8:24603088 chr08:024603088 0 W/24603088-24603088 FN899-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g38930 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3332-S.SNP.8:24610563 chr08:024610563 0 W/24610563-24610563 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.477456;DP=3446;DP4=1371,1982,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.25753e-11;MQSB=0.458745;RPB=0.876764;SGB=84.9167;VDB=0.781203;EFF=INTRON(MODIFIER||||1089|LOC_Os08g38940|protein_coding|CODING|LOC_Os08g38940.1|2|1) FN1230-S.SNP.8:24614235 chr08:024614235 0 W/24614235-24614235 FN1230-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2157-S.SNP.8:24615413 chr08:024615413 0 W/24615413-24615413 FN2157-S SNP G -> T AC=1;AN=168;BQB=0.996408;DP=2779;DP4=1570,1132,17,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3537e-17;MQSB=0.933687;RPB=0.973874;SGB=65.9394;VDB=0.119934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.8:24615414 chr08:024615414 0 W/24615414-24615414 FN2157-S SNP A -> T AC=1;AN=168;BQB=0.431009;DP=2769;DP4=1561,1121,19,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.24292e-17;MQSB=0.933446;RPB=0.780541;SGB=-232.588;VDB=0.130366;EFF=INTERGENIC(MODIFIER||||||||||1) FN684-S.SNP.8:24618450 chr08:024618450 0 W/24618450-24618450 FN684-S Single Base Substitution C-A INTERGENIC HOMO SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1094-S.SNP.8:24628325 chr08:024628325 0 W/24628325-24628325 FN1094-S Single Base Substitution T-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1094-S.SNP.8:24628326 chr08:024628326 0 W/24628326-24628326 FN1094-S Single Base Substitution C-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2381.SNP.8:24630570 chr08:024630570 0 W/24630570-24630570 FN2381 SNP C -> T AC=1;AN=192;BQB=0.332992;DP=4983;DP4=2189,2431,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.48936e-07;MQSB=0.684765;RPB=0.972444;SGB=36.2157;VDB=0.919572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.8:24637966 chr08:024637966 0 W/24637966-24637966 FN2217-S SNP T -> G AC=1;AN=190;BQB=0.583467;DP=4862;DP4=2403,2066,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.26813e-09;MQSB=0.885723;RPB=0.845239;SGB=11.8805;VDB=0.121033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3978-S.SNP.8:24640431 chr08:024640431 0 W/24640431-24640431 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.991243;DP=2902;DP4=1393,1423,11,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.60902e-09;MQSB=0.854226;RPB=0.931545;SGB=19.7539;VDB=0.536579;EFF=INTRON(MODIFIER||||750|LOC_Os08g38980|protein_coding|CODING|LOC_Os08g38980.1|1|1) FN793-S.SNP.8:24642943 chr08:024642943 0 W/24642943-24642943 FN793-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g38980 chloride transporter, chloride channel family, putative, expressed SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2203-S.SNP.8:24651977 chr08:024651977 0 W/24651977-24651977 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.19527;DP=4053;DP4=2024,1733,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85402e-15;MQSB=0.719782;RPB=0.968593;SGB=28.9731;VDB=0.53781;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.8:24655297 chr08:024655297 0 W/24655297-24655297 FN793-S Single Base Substitution A-C INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2678-S.SNP.8:24665690 chr08:024665690 0 W/24665690-24665690 FN2678-S SNP G -> T AC=1;AN=200;BQB=0.820504;DP=4732;DP4=2190,2349,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25215e-09;MQSB=0.97011;RPB=0.479328;SGB=40.2696;VDB=0.504048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.8:24679402 chr08:024679402 0 W/24679402-24679402 FN2483 SNP T -> G AC=1;AN=200;BQB=0.986573;DP=4532;DP4=2260,2009,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86484e-08;MQSB=0.999937;RPB=0.907805;SGB=16.4591;VDB=0.864226;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Ggc|C210G|443|LOC_Os08g39060|protein_coding|CODING|LOC_Os08g39060.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Ggc|C386G|619|LOC_Os08g39060|protein_coding|CODING|LOC_Os08g39060.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Ggc|C209G|442|LOC_Os08g39060|protein_coding|CODING|LOC_Os08g39060.3|4|1) FN2114-S.SNP.8:24681070 chr08:024681070 0 W/24681070-24681070 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.551653;DP=2459;DP4=1751,672,13,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000813095;MQSB=0.672787;RPB=0.997822;SGB=22.1847;VDB=0.126298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.8:24687388 chr08:024687388 0 W/24687388-24687388 FN1006-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g39080 tetratricopeptide repeat domain containing protein, expressed SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN669-S.SNP.8:24688920 chr08:024688920 0 W/24688920-24688920 FN669-S Single Base Substitution T-A INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN515-S.SNP.8:24699097 chr08:024699097 0 W/24699097-24699097 FN515-S Single Base Substitution A-T INTERGENIC HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1258-S.SNP.8:24708051 chr08:024708051 0 W/24708051-24708051 FN1258-S Single Base Substitution T-C INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN703-S.SNP.8:24714072 chr08:024714072 0 W/24714072-24714072 FN703-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN703-S.SNP.8:24714073 chr08:024714073 0 W/24714073-24714073 FN703-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g39120 expressed protein SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN722-S.SNP.8:24714310 chr08:024714310 0 W/24714310-24714310 FN722-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os08g39120 expressed protein SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN1256-S.SNP.8:24719170 chr08:024719170 0 W/24719170-24719170 FN1256-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN4051-S.SNP.8:24721786 chr08:024721786 0 W/24721786-24721786 FN4051-S SNP G -> C AC=1;AN=168;BQB=0.910363;DP=2544;DP4=1267,1118,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.52837e-08;MQSB=0.953029;RPB=0.716201;SGB=41.6096;VDB=0.774083;EFF=INTRON(MODIFIER||||699|LOC_Os08g39140|protein_coding|CODING|LOC_Os08g39140.1|2|1),INTRON(MODIFIER||||645|LOC_Os08g39140|protein_coding|CODING|LOC_Os08g39140.2|2|1),INTRON(MODIFIER||||614|LOC_Os08g39140|protein_coding|CODING|LOC_Os08g39140.3|1|1),INTRON(MODIFIER||||494|LOC_Os08g39140|protein_coding|CODING|LOC_Os08g39140.4|2|1) FN1755-S.SNP.8:24725981 chr08:024725981 0 W/24725981-24725981 FN1755-S SNP A -> T AC=1;AN=188;BQB=0.0149246;DP=4568;DP4=2460,2054,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.81403e-08;MQSB=0.959187;RPB=0.925202;SGB=-255.616;VDB=0.925082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.8:24731424 chr08:024731424 0 W/24731424-24731424 FN2653-S SNP T -> A AC=1;AN=200;BQB=0.998993;DP=4774;DP4=2262,2392,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.67213e-11;MQSB=0.762566;RPB=0.61539;SGB=58.2954;VDB=0.228785;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.8:24731831 chr08:024731831 0 W/24731831-24731831 W360-2S-2 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g39160 formyl transferase, putative, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. W360-2S-2.SNP.8:24731832 chr08:024731832 0 W/24731832-24731832 W360-2S-2 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g39160 formyl transferase, putative, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2291.SNP.8:24734784 chr08:024734784 0 W/24734784-24734784 FN2291 SNP T -> C AC=1;AN=192;BQB=0.97299;DP=5289;DP4=2561,2364,23,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.90463e-26;MQSB=0.802239;RPB=0.751985;SGB=160.968;VDB=0.674082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.8:24746569 chr08:024746569 0 W/24746569-24746569 FN2667-S SNP C -> A AC=1;AN=200;BQB=0.993552;DP=4862;DP4=2310,2244,16,15;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0135747;MQB=0.0660802;MQSB=7.79569e-17;RPB=0.346509;SGB=101.557;VDB=0.613775;EFF=INTRON(MODIFIER||||1763|LOC_Os08g39174|protein_coding|CODING|LOC_Os08g39174.1|10|1) FN-330.SNP.8:24751001 chr08:024751001 0 W/24751001-24751001 FN-330 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g39174 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN859-S.SNP.8:24755525 chr08:024755525 0 W/24755525-24755525 FN859-S Single Base Substitution C-G INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. W598-2-1.SNP.8:24758733 chr08:024758733 0 W/24758733-24758733 W598-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN539-S.SNP.8:24760359 chr08:024760359 0 W/24760359-24760359 FN539-S Single Base Substitution C-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN539-S.SNP.8:24760360 chr08:024760360 0 W/24760360-24760360 FN539-S Single Base Substitution C-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2299.SNP.8:24766116 chr08:024766116 0 W/24766116-24766116 FN2299 SNP T -> A AC=2;AN=192;BQB=0.733479;DP=5093;DP4=2470,2048,21,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.46182e-17;MQSB=0.755951;RPB=0.971111;SGB=121.76;VDB=0.69554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.8:24768005 chr08:024768005 0 W/24768005-24768005 FN3527-S SNP T -> A AC=2;AN=188;BQB=0.931876;DP=2622;DP4=1310,1213,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.8436e-18;MQSB=0.962765;RPB=0.85039;SGB=54.0524;VDB=0.768779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S554C|696|LOC_Os08g39210|protein_coding|CODING|LOC_Os08g39210.1|2|1) FN3527-S.SNP.8:24768006 chr08:024768006 0 W/24768006-24768006 FN3527-S SNP C -> A AC=2;AN=188;BQB=0.710846;DP=2628;DP4=1326,1237,7,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.34067e-14;MQSB=0.930857;RPB=0.914644;SGB=94.4119;VDB=0.87477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R553S|696|LOC_Os08g39210|protein_coding|CODING|LOC_Os08g39210.1|2|1) FN2706-S.SNP.8:24774371 chr08:024774371 0 W/24774371-24774371 FN2706-S SNP G -> T AC=1;AN=200;BQB=0.828191;DP=4939;DP4=2244,2409,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.58387e-14;MQSB=0.974572;RPB=0.967619;SGB=15.9106;VDB=0.70848;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G312C|730|LOC_Os08g39220|protein_coding|CODING|LOC_Os08g39220.1|3|1) FN3856-S.SNP.8:24775024 chr08:024775024 0 W/24775024-24775024 FN3856-S SNP A -> T AC=1;AN=158;BQB=0.988218;DP=2474;DP4=1233,1141,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.05927e-06;MQSB=0.965599;RPB=0.726245;SGB=47.0672;VDB=0.836021;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N491I|730|LOC_Os08g39220|protein_coding|CODING|LOC_Os08g39220.1|4|1) FN3448-S.SNP.8:24784265 chr08:024784265 0 W/24784265-24784265 FN3448-S SNP A -> G AC=1;AN=184;BQB=0.956043;DP=2556;DP4=1360,1127,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.17345e-08;MQSB=0.00432284;RPB=0.232784;SGB=66.8296;VDB=0.639777;EFF=INTRON(MODIFIER||||716|LOC_Os08g39240|protein_coding|CODING|LOC_Os08g39240.1|3|1),INTRON(MODIFIER||||369|LOC_Os08g39240|protein_coding|CODING|LOC_Os08g39240.2|2|1) FN2462.SNP.8:24786560 chr08:024786560 0 W/24786560-24786560 FN2462 SNP C -> A AC=1;AN=200;BQB=0.882302;DP=4272;DP4=2342,1736,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00227207;MQSB=0.221859;RPB=0.999056;SGB=40.4492;VDB=0.218005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.8:24786707 chr08:024786707 0 W/24786707-24786707 FN3670-S SNP G -> A AC=1;AN=190;BQB=0.997894;DP=2148;DP4=1138,902,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000136365;MQSB=0.109506;RPB=0.822399;SGB=35.4339;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.8:24789038 chr08:024789038 0 W/24789038-24789038 FN666-S Single Base Substitution G-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3708-S.SNP.8:24803467 chr08:024803467 0 W/24803467-24803467 FN3708-S SNP T -> A AC=2;AN=190;BQB=0.983225;DP=2870;DP4=1440,1287,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.90311e-12;MQSB=0.969936;RPB=0.990425;SGB=99.1879;VDB=0.496493;EFF=INTRON(MODIFIER||||694|LOC_Os08g39250|protein_coding|CODING|LOC_Os08g39250.1|6|1) FN3711-S.SNP.8:24812150 chr08:024812150 0 W/24812150-24812150 FN3711-S SNP G -> A AC=1;AN=190;BQB=0.0991497;DP=2008;DP4=634,1027,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.01589e-05;MQSB=0.914608;RPB=0.17624;SGB=-17.0991;VDB=0.520686;EFF=INTERGENIC(MODIFIER||||||||||1) FN-8.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN-8 Single Base Substitution A-T INTERGENIC Homo SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1014-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN1014-S Single Base Substitution A-T INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1317-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN1317-S Single Base Substitution A-T INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1461-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN1461-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1561-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN1561-S Single Base Substitution A-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2126-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN2126-S SNP A -> T AC=1;AN=168;BQB=0.199898;DP=3291;DP4=1540,1681,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23344e-07;MQSB=0.975698;RPB=0.429461;SGB=-71.2065;VDB=0.908098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN2272-S SNP A -> T AC=1;AN=190;BQB=0.914353;DP=4764;DP4=2132,2127,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209908;MQB=1.73775e-17;MQSB=0.904828;RPB=0.680165;SGB=35.1887;VDB=0.403162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN3057-S SNP A -> T AC=1;AN=184;BQB=0.993323;DP=3366;DP4=1594,1655,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79823e-08;MQSB=0.86776;RPB=0.98874;SGB=62.3078;VDB=0.289748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN3554-S SNP A -> T AC=2;AN=188;BQB=0.29072;DP=3150;DP4=1544,1491,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.35042e-12;MQSB=0.711235;RPB=0.905547;SGB=121.672;VDB=0.456701;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN3705-S SNP A -> T AC=2;AN=190;BQB=0.982342;DP=3088;DP4=1448,1510,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14443e-14;MQSB=0.887715;RPB=0.131456;SGB=117.403;VDB=0.366677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN3994-S SNP A -> T AC=2;AN=168;BQB=0.941294;DP=2883;DP4=1356,1404,6,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.64784e-10;MQSB=0.988507;RPB=0.998756;SGB=65.4653;VDB=0.849155;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.8:24826593 chr08:024826593 0 W/24826593-24826593 FN910-S Single Base Substitution A-T INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3530-S.SNP.8:24833187 chr08:024833187 0 W/24833187-24833187 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.955238;DP=3003;DP4=1397,1387,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.46934e-18;MQSB=0.779314;RPB=0.321644;SGB=66.7689;VDB=0.0366137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.8:24847663 chr08:024847663 0 W/24847663-24847663 FN2484 SNP T -> C AC=1;AN=200;BQB=0.890458;DP=4839;DP4=1893,2622,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56092e-11;MQSB=0.984972;RPB=0.999945;SGB=17.5158;VDB=0.513896;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.8:24848780 chr08:024848780 0 W/24848780-24848780 FN1014-S Single Base Substitution C-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2484.SNP.8:24848905 chr08:024848905 0 W/24848905-24848905 FN2484 SNP A -> T AC=1;AN=200;BQB=0.121167;DP=4230;DP4=1925,1783,9,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.95795e-06;MQSB=0.66497;RPB=0.751469;SGB=-8.87404;VDB=0.884908;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.8:24853587 chr08:024853587 0 W/24853587-24853587 FN318-S Single Base Substitution T-G INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2446.SNP.8:24854153 chr08:024854153 0 W/24854153-24854153 FN2446 SNP C -> T AC=1;AN=200;BQB=0.950916;DP=4770;DP4=1964,2532,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209644;MQB=9.40446e-07;MQSB=0.840066;RPB=0.877083;SGB=49.6594;VDB=0.470998;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.8:24858788 chr08:024858788 0 W/24858788-24858788 FN-410 Single Base Substitution G-A INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2559-S.SNP.8:24876565 chr08:024876565 0 W/24876565-24876565 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.137087;DP=3616;DP4=1969,1490,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.0567792;MQSB=0.964889;RPB=0.822825;SGB=8.58354;VDB=0.171339;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.8:24891562 chr08:024891562 0 W/24891562-24891562 FN982-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2216-S.SNP.8:24894075 chr08:024894075 0 W/24894075-24894075 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.771052;DP=3868;DP4=1872,1702,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.22411e-14;MQSB=0.367904;RPB=0.992545;SGB=103.742;VDB=0.685352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.8:24895829 chr08:024895829 0 W/24895829-24895829 FN2187-S SNP G -> A AC=1;AN=190;BQB=0.964028;DP=4902;DP4=2154,2376,17,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.77589e-17;MQSB=0.799861;RPB=0.263922;SGB=92.9626;VDB=0.128952;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.8:24898526 chr08:024898526 0 W/24898526-24898526 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN2164-S.SNP.8:24899997 chr08:024899997 0 W/24899997-24899997 FN2164-S SNP G -> C AC=2;AN=168;BQB=0.65235;DP=2546;DP4=1306,1165,25,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.89215e-16;MQSB=0.83853;RPB=0.214812;SGB=65.9394;VDB=0.945624;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.8:24905466 chr08:024905466 0 W/24905466-24905466 FN618-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3429-S.SNP.8:24910541 chr08:024910541 0 W/24910541-24910541 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.428157;DP=2608;DP4=1256,1300,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.18466e-06;MQSB=0.99134;RPB=0.042575;SGB=39.2697;VDB=0.576633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.8:24911772 chr08:024911772 0 W/24911772-24911772 FN2756-S SNP G -> A AC=2;AN=200;BQB=0.188362;DP=4803;DP4=2137,2433,19,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.51381e-22;MQSB=0.969;RPB=0.957619;SGB=44.8037;VDB=0.747438;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.8:24912587 chr08:024912587 0 W/24912587-24912587 FN3949-S SNP G -> A AC=1;AN=168;BQB=0.857685;DP=2314;DP4=1036,1166,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.61098e-08;MQSB=0.963582;RPB=0.410775;SGB=52.1728;VDB=0.102551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.8:24915359 chr08:024915359 0 W/24915359-24915359 FN2494 SNP A -> G AC=2;AN=200;BQB=0.652251;DP=4421;DP4=2401,1674,26,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.37721e-24;MQSB=0.958531;RPB=0.0243196;SGB=134.004;VDB=0.0892806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.8:24927907 chr08:024927907 0 W/24927907-24927907 FN2311 SNP G -> A AC=1;AN=192;BQB=0.437994;DP=4863;DP4=2197,2307,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.86502e-07;MQSB=0.967925;RPB=0.0800318;SGB=10.4835;VDB=0.483665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.8:24929671 chr08:024929671 0 W/24929671-24929671 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.941597;DP=4908;DP4=2368,2272,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82596e-12;MQSB=0.991646;RPB=0.905793;SGB=65.5058;VDB=0.718809;EFF=UTR_3_PRIME(MODIFIER||221||361|LOC_Os08g39420|protein_coding|CODING|LOC_Os08g39420.1|11|1),UTR_3_PRIME(MODIFIER||221||327|LOC_Os08g39420|protein_coding|CODING|LOC_Os08g39420.2|12|1) FN547-S.SNP.8:24932830 chr08:024932830 0 W/24932830-24932830 FN547-S Single Base Substitution G-A INTRON HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3843-S.SNP.8:24936494 chr08:024936494 0 W/24936494-24936494 FN3843-S SNP G -> C AC=1;AN=190;BQB=0.981828;DP=2938;DP4=1348,1497,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70063e-08;MQSB=0.992594;RPB=0.704803;SGB=53.6492;VDB=0.513195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.8:24936823 chr08:024936823 0 W/24936823-24936823 FN3294-S SNP G -> T AC=1;AN=184;BQB=0.861134;DP=3530;DP4=1844,1581,15,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.81698e-11;MQSB=0.984482;RPB=0.806553;SGB=38.4058;VDB=0.820677;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.8:24938089 chr08:024938089 0 W/24938089-24938089 FN1114-S Single Base Substitution G-A INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2085-S.SNP.8:24940376 chr08:024940376 0 W/24940376-24940376 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.00528114;DP=4064;DP4=2027,1992,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02903e-08;MQSB=0.978485;RPB=0.328642;SGB=-186.896;VDB=0.304284;EFF=INTRON(MODIFIER||||709|LOC_Os08g39440|protein_coding|CODING|LOC_Os08g39440.1|1|1),INTRON(MODIFIER||||684|LOC_Os08g39440|protein_coding|CODING|LOC_Os08g39440.2|1|1) FN3653-S.SNP.8:24948619 chr08:024948619 0 W/24948619-24948619 FN3653-S SNP A -> G AC=1;AN=190;BQB=0.987401;DP=3084;DP4=1556,1433,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.77759e-07;MQSB=0.898807;RPB=0.972989;SGB=32.5467;VDB=0.65871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.8:24951664 chr08:024951664 0 W/24951664-24951664 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.996274;DP=3485;DP4=1646,1695,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.93885e-08;MQSB=0.694944;RPB=0.824916;SGB=39.5276;VDB=0.486279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3708-S.SNP.8:24954969 chr08:024954969 0 W/24954969-24954969 FN3708-S SNP G -> A AC=2;AN=190;BQB=0.588493;DP=3087;DP4=1552,1322,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.43706e-14;MQSB=0.964591;RPB=0.955878;SGB=103.624;VDB=0.928635;EFF=UTR_3_PRIME(MODIFIER||452||170|LOC_Os08g39450|protein_coding|CODING|LOC_Os08g39450.1|1|1) FN-368.SNP.8:24956704 chr08:024956704 0 W/24956704-24956704 FN-368 Single Base Substitution A-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3527-S.SNP.8:24957989 chr08:024957989 0 W/24957989-24957989 FN3527-S SNP A -> G AC=2;AN=188;BQB=0.936225;DP=2535;DP4=1127,1345,10,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.46952e-10;MQSB=0.999245;RPB=0.994981;SGB=60.7873;VDB=0.261293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.8:24967551 chr08:024967551 0 W/24967551-24967551 FN2340 SNP G -> A AC=1;AN=192;BQB=0.103629;DP=4884;DP4=2227,2239,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.06974e-08;MQSB=0.992219;RPB=0.428993;SGB=-83.753;VDB=0.610367;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.8:24972168 chr08:024972168 0 W/24972168-24972168 FN3332-S SNP C -> A AC=1;AN=184;BQB=0.902618;DP=2978;DP4=1653,1200,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.1205e-10;MQSB=0.782552;RPB=0.619072;SGB=49.835;VDB=0.672349;EFF=INTRON(MODIFIER||||151|LOC_Os08g39470|protein_coding|CODING|LOC_Os08g39470.1|1|1) FN3332-S.SNP.8:24975006 chr08:024975006 0 W/24975006-24975006 FN3332-S SNP A -> C AC=1;AN=184;BQB=0.943274;DP=3413;DP4=1593,1611,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.92458e-12;MQSB=0.999313;RPB=0.588641;SGB=38.4058;VDB=0.463421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.8:24982424 chr08:024982424 0 W/24982424-24982424 FN2426 SNP A -> G AC=1;AN=200;BQB=0.713679;DP=4840;DP4=2875,1602,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.73379e-13;MQSB=0.853915;RPB=0.603318;SGB=91.1059;VDB=0.92676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.8:24986528 chr08:024986528 0 W/24986528-24986528 FN1374-S Single Base Substitution G-A INTRON Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1006-S.SNP.8:24986558 chr08:024986558 0 W/24986558-24986558 FN1006-S Single Base Substitution G-T INTRON HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN-237.SNP.8:24992899 chr08:024992899 0 W/24992899-24992899 FN-237 Single Base Substitution A-C INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN752-S.SNP.8:24997322 chr08:024997322 0 W/24997322-24997322 FN752-S Single Base Substitution C-T INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2547-S.SNP.8:24998472 chr08:024998472 0 W/24998472-24998472 FN2547-S SNP C -> T AC=1;AN=198;BQB=0.404963;DP=4216;DP4=1993,1944,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.31819e-05;MQSB=0.975018;RPB=0.946906;SGB=13.7737;VDB=0.938987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.8:24999302 chr08:024999302 0 W/24999302-24999302 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.739465;DP=3877;DP4=1573,1920,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000257931;MQB=1.47537e-07;MQSB=0.175453;RPB=0.793176;SGB=28.7675;VDB=0.125356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.8:25006433 chr08:025006433 0 W/25006433-25006433 FN1458-S Single Base Substitution T-G INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1713-S.SNP.8:25006860 chr08:025006860 0 W/25006860-25006860 FN1713-S SNP T -> C AC=2;AN=188;BQB=0.0793227;DP=3032;DP4=705,2277,12,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.81005e-19;MQSB=0.78382;RPB=0.784219;SGB=-269.188;VDB=0.255848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.8:25008309 chr08:025008309 0 W/25008309-25008309 FN2401 SNP G -> A AC=1;AN=200;BQB=0.766175;DP=4009;DP4=1916,1726,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000249439;MQB=3.88122e-15;MQSB=0.900338;RPB=0.483453;SGB=90.7419;VDB=0.214461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.8:25008310 chr08:025008310 0 W/25008310-25008310 FN2401 SNP C -> A AC=1;AN=200;BQB=0.0690454;DP=4000;DP4=1922,1692,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00025;MQB=1.07267e-16;MQSB=0.950074;RPB=0.436503;SGB=71.1676;VDB=0.112124;EFF=INTERGENIC(MODIFIER||||||||||1) FN1685-S.SNP.8:25008761 chr08:025008761 0 W/25008761-25008761 FN1685-S SNP C -> A AC=1;AN=188;BQB=0.411256;DP=3694;DP4=2083,1570,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.53571e-12;MQSB=0.801522;RPB=0.920934;SGB=-135.175;VDB=0.486685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.8:25009067 chr08:025009067 0 W/25009067-25009067 FN3504-S SNP A -> G AC=2;AN=188;BQB=0.977342;DP=2614;DP4=1230,1285,9,14;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=8.84586e-11;MQSB=0.999977;RPB=0.180459;SGB=98.9552;VDB=0.0555168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2401.SNP.8:25014336 chr08:025014336 0 W/25014336-25014336 FN2401 SNP T -> A AC=1;AN=200;BQB=0.673193;DP=4141;DP4=1646,1712,19,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.1119e-10;MQSB=0.879114;RPB=0.878563;SGB=47.7211;VDB=0.911319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.8:25014820 chr08:025014820 0 W/25014820-25014820 FN2171-S SNP G -> A AC=1;AN=168;BQB=0.00456572;DP=2885;DP4=1640,1204,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.56968e-07;MQSB=0.997074;RPB=0.253635;SGB=-85.2162;VDB=0.400145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.8:25018751 chr08:025018751 0 W/25018751-25018751 FN3386-S SNP T -> A AC=2;AN=184;BQB=0.988244;DP=2963;DP4=1475,1402,15,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.74512e-14;MQSB=0.919004;RPB=0.919452;SGB=78.0093;VDB=0.695426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.8:25029899 chr08:025029899 0 W/25029899-25029899 FN3749-S SNP C -> T AC=1;AN=190;BQB=0.993321;DP=2979;DP4=1529,1314,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0164485;MQB=4.42392e-05;MQSB=0.662143;RPB=0.688474;SGB=50.3161;VDB=0.197194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.8:25030998 chr08:025030998 0 W/25030998-25030998 FN3444-S SNP T -> G AC=1;AN=184;BQB=0.887978;DP=2763;DP4=1273,1386,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00760043;MQB=2.69116e-07;MQSB=0.391337;RPB=0.733226;SGB=3.75875;VDB=0.539953;EFF=INTERGENIC(MODIFIER||||||||||1) FN-84.SNP.8:25045907 chr08:025045907 0 W/25045907-25045907 FN-84 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g39580 zinc knuckle family protein, expressed SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1431-S.SNP.8:25050612 chr08:025050612 0 W/25050612-25050612 FN1431-S Single Base Substitution T-A INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN337-S.SNP.8:25054498 chr08:025054498 0 W/25054498-25054498 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3296-S.SNP.8:25056048 chr08:025056048 0 W/25056048-25056048 FN3296-S SNP G -> T AC=1;AN=184;BQB=0.485993;DP=3293;DP4=1991,1188,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49311e-09;MQSB=0.998525;RPB=0.574031;SGB=25.7969;VDB=0.456713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.8:25056049 chr08:025056049 0 W/25056049-25056049 FN3296-S SNP G -> T AC=1;AN=184;BQB=0.999614;DP=3280;DP4=1953,1186,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60164e-08;MQSB=0.996371;RPB=0.690924;SGB=57.786;VDB=0.717994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1645-S.SNP.8:25056925 chr08:025056925 0 W/25056925-25056925 FN1645-S Single Base Substitution T-A INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN3661-S.SNP.8:25057733 chr08:025057733 0 W/25057733-25057733 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.110702;DP=3034;DP4=1425,1460,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000100013;MQSB=0.868717;RPB=0.518099;SGB=-0.550503;VDB=0.31429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2434.SNP.8:25077069 chr08:025077069 0 W/25077069-25077069 FN2434 SNP G -> A AC=1;AN=200;BQB=0.228836;DP=4106;DP4=1977,1665,14,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.37588e-06;MQSB=0.618187;RPB=0.969208;SGB=77.2904;VDB=0.200144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.8:25077069 chr08:025077069 0 W/25077069-25077069 FN3326-S SNP G -> A AC=1;AN=184;BQB=0.991988;DP=2943;DP4=1485,1288,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.96852e-08;MQSB=0.955528;RPB=0.584509;SGB=71.3514;VDB=0.249797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.8:25081573 chr08:025081573 0 W/25081573-25081573 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.990937;DP=2705;DP4=882,1667,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.27101e-11;MQSB=0.96122;RPB=0.682586;SGB=57.244;VDB=0.0159748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.8:25082174 chr08:025082174 0 W/25082174-25082174 FN3560-S SNP G -> T AC=1;AN=188;BQB=0.990187;DP=1685;DP4=455,1168,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.05384e-06;MQSB=0.446993;RPB=0.956396;SGB=21.8113;VDB=0.687358;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.8:25100455 chr08:025100455 0 W/25100455-25100455 FN963-S Single Base Substitution G-A INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN1285-S.SNP.8:25102253 chr08:025102253 0 W/25102253-25102253 FN1285-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g39640 cytochrome P450, putative, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1625-S.SNP.8:25105200 chr08:025105200 0 W/25105200-25105200 FN1625-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g39640 cytochrome P450, putative, expressed SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.8:25105200 chr08:025105200 0 W/25105200-25105200 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.589358;DP=1431;DP4=784,586,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00100164;MQSB=0.743665;RPB=0.382665;SGB=21.8113;VDB=0.945531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P174S|311|LOC_Os08g39640|protein_coding|CODING|LOC_Os08g39640.1|2|1) FN3363-S.SNP.8:25110796 chr08:025110796 0 W/25110796-25110796 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.409288;DP=4706;DP4=2620,1937,16,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.49897e-10;MQSB=0.93767;RPB=0.984774;SGB=81.5311;VDB=0.704655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G166E|505|LOC_Os08g39660|protein_coding|CODING|LOC_Os08g39660.1|1|1) FN2249-S.SNP.8:25116155 chr08:025116155 0 W/25116155-25116155 FN2249-S SNP A -> G AC=2;AN=190;BQB=0.593456;DP=4419;DP4=2042,1787,32,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.32404e-25;MQSB=0.58052;RPB=0.0951419;SGB=-118.164;VDB=0.0381983;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G263|266|LOC_Os08g39680|protein_coding|CODING|LOC_Os08g39680.1|5|1) 701-3.SNP.8:25116987 chr08:025116987 0 W/25116987-25116987 701-3 Single Base Substitution C-T INTRON HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.8:25116987 chr08:025116987 0 W/25116987-25116987 701-3 Single Base Substitution C-T INTRON Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-4.SNP.8:25116987 chr08:025116987 0 W/25116987-25116987 701-4 Single Base Substitution C-T INTRON Homo SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. 701-6.SNP.8:25116987 chr08:025116987 0 W/25116987-25116987 701-6 Single Base Substitution C-T INTRON Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. 701-8.SNP.8:25116987 chr08:025116987 0 W/25116987-25116987 701-8 Single Base Substitution C-T INTRON HET SNo: 1442, Mutant_ID: 701-8, Generation: M2, Mutations: 20, Genes: 7, Seed availability: Yes. FN_N1-169-1.SNP.8:25135913 chr08:025135913 0 W/25135913-25135913 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1506-S.SNP.8:25137412 chr08:025137412 0 W/25137412-25137412 FN1506-S Single Base Substitution T-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1506-S.SNP.8:25137416 chr08:025137416 0 W/25137416-25137416 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1269-S.SNP.8:25138879 chr08:025138879 0 W/25138879-25138879 FN1269-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g39710 retrotransposon protein, putative, unclassified, expressed SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1292-S.SNP.8:25152977 chr08:025152977 0 W/25152977-25152977 FN1292-S Single Base Substitution A-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1292-S.SNP.8:25152979 chr08:025152979 0 W/25152979-25152979 FN1292-S Single Base Substitution A-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1625-S.SNP.8:25153267 chr08:025153267 0 W/25153267-25153267 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.8:25153267 chr08:025153267 0 W/25153267-25153267 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.913236;DP=3606;DP4=2035,1533,20,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00443705;MQB=6.30526e-08;MQSB=5.80508e-05;RPB=0.999749;SGB=-41.0182;VDB=0.152317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.8:25156066 chr08:025156066 0 W/25156066-25156066 FN2755-S SNP T -> C AC=1;AN=200;BQB=0.988925;DP=4823;DP4=2408,1995,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03075e-08;MQSB=0.989923;RPB=0.901448;SGB=43.8747;VDB=0.384463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F297S|506|LOC_Os08g39730|protein_coding|CODING|LOC_Os08g39730.1|1|1) FN3455-S.SNP.8:25160478 chr08:025160478 0 W/25160478-25160478 FN3455-S SNP T -> A AC=1;AN=184;BQB=0.80121;DP=2530;DP4=1081,1302,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.59832e-11;MQSB=0.863341;RPB=0.784035;SGB=49.835;VDB=0.435057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.8:25160482 chr08:025160482 0 W/25160482-25160482 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.876635;DP=2543;DP4=1102,1367,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.87143e-10;MQSB=0.968927;RPB=0.844544;SGB=49.835;VDB=0.588506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.8:25161742 chr08:025161742 0 W/25161742-25161742 FN3355-S SNP T -> A AC=2;AN=184;BQB=0.824201;DP=2769;DP4=1456,1184,17,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.49941e-12;MQSB=0.997739;RPB=0.972015;SGB=85.0529;VDB=0.651154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.8:25162059 chr08:025162059 0 W/25162059-25162059 FN1623-S Single Base Substitution A-G INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN574-S.SNP.8:25162140 chr08:025162140 0 W/25162140-25162140 FN574-S Single Base Substitution A-G INTERGENIC HOMO SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN702-S.SNP.8:25163325 chr08:025163325 0 W/25163325-25163325 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1480-S.SNP.8:25164818 chr08:025164818 0 W/25164818-25164818 FN1480-S Single Base Substitution A-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. W360-2S-2.SNP.8:25168967 chr08:025168967 0 W/25168967-25168967 W360-2S-2 Single Base Substitution G-A INTRON HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2407.SNP.8:25170172 chr08:025170172 0 W/25170172-25170172 FN2407 SNP G -> A AC=1;AN=200;BQB=0.947938;DP=4243;DP4=2262,1751,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.68663e-10;MQSB=0.99621;RPB=0.959843;SGB=77.2904;VDB=0.900591;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A251|450|LOC_Os08g39750|protein_coding|CODING|LOC_Os08g39750.1|6|1) FN1633-S.SNP.8:25187103 chr08:025187103 0 W/25187103-25187103 FN1633-S Single Base Substitution C-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3718-S.SNP.8:25189856 chr08:025189856 0 W/25189856-25189856 FN3718-S SNP C -> T AC=2;AN=190;BQB=0.95594;DP=2893;DP4=1277,1476,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.51343e-12;MQSB=0.61081;RPB=0.997922;SGB=78.7471;VDB=0.641508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R58Q|225|LOC_Os08g39790|protein_coding|CODING|LOC_Os08g39790.1|2|1) FN3505-S.SNP.8:25189994 chr08:025189994 0 W/25189994-25189994 FN3505-S SNP G -> A AC=2;AN=188;BQB=0.908119;DP=3124;DP4=1459,1584,13,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00224072;MQB=1.12399e-13;MQSB=0.122074;RPB=0.257571;SGB=-6.30704;VDB=0.0423027;EFF=INTRON(MODIFIER||||225|LOC_Os08g39790|protein_coding|CODING|LOC_Os08g39790.1|1|1) FN3570-S.SNP.8:25195036 chr08:025195036 0 W/25195036-25195036 FN3570-S SNP A -> T AC=2;AN=190;BQB=0.291545;DP=3018;DP4=1440,1372,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.48723e-12;MQSB=0.840519;RPB=0.875761;SGB=-10.4526;VDB=0.850043;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G877|1027|LOC_Os08g39810|protein_coding|CODING|LOC_Os08g39810.1|8|1) FN3570-S.SNP.8:25195037 chr08:025195037 0 W/25195037-25195037 FN3570-S SNP C -> G AC=2;AN=190;BQB=0.986342;DP=3018;DP4=1443,1415,14,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.69967e-12;MQSB=0.841412;RPB=0.967236;SGB=80.9724;VDB=0.882537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G877A|1027|LOC_Os08g39810|protein_coding|CODING|LOC_Os08g39810.1|8|1) FN3288-S.SNP.8:25195161 chr08:025195161 0 W/25195161-25195161 FN3288-S SNP G -> A AC=1;AN=184;BQB=0.906652;DP=3661;DP4=1820,1759,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00136575;MQB=4.10648e-09;MQSB=0.960465;RPB=0.961675;SGB=57.786;VDB=0.474446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R836W|1027|LOC_Os08g39810|protein_coding|CODING|LOC_Os08g39810.1|8|1) FN_786-4-1.SNP.8:25197259 chr08:025197259 0 W/25197259-25197259 FN_786-4-1 Single Base Substitution T-G HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN522-S.SNP.8:25197433 chr08:025197433 0 W/25197433-25197433 FN522-S Single Base Substitution G-A INTRON HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN522-S.SNP.8:25197434 chr08:025197434 0 W/25197434-25197434 FN522-S Single Base Substitution C-T INTRON HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1050-S.SNP.8:25205125 chr08:025205125 0 W/25205125-25205125 FN1050-S Single Base Substitution C-T INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1521-S.SNP.8:25205434 chr08:025205434 0 W/25205434-25205434 FN1521-S Single Base Substitution G-A INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1379-S.SNP.8:25211614 chr08:025211614 0 W/25211614-25211614 FN1379-S Single Base Substitution G-T INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1379-S.SNP.8:25211625 chr08:025211625 0 W/25211625-25211625 FN1379-S Single Base Substitution G-T INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN_831-4-1.SNP.8:25215807 chr08:025215807 0 W/25215807-25215807 FN_831-4-1 Single Base Substitution C-T HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN505-S.SNP.8:25226284 chr08:025226284 0 W/25226284-25226284 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2138-S.SNP.8:25226422 chr08:025226422 0 W/25226422-25226422 FN2138-S SNP A -> G AC=1;AN=168;BQB=0.0220455;DP=3736;DP4=1745,1940,11,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30723e-11;MQSB=0.988997;RPB=0.654088;SGB=-11.4952;VDB=0.987652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.8:25226976 chr08:025226976 0 W/25226976-25226976 FN3487-S SNP G -> C AC=2;AN=184;BQB=0.94391;DP=2690;DP4=1454,1049,17,12;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=3.92968e-15;MQSB=0.0994994;RPB=0.949784;SGB=25.0638;VDB=0.759574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3324-S.SNP.8:25235789 chr08:025235789 0 W/25235789-25235789 FN3324-S SNP T -> C AC=1;AN=184;BQB=0.994917;DP=3438;DP4=1535,1814,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.76619e-08;MQSB=0.985994;RPB=0.974685;SGB=57.786;VDB=0.735281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.8:25240079 chr08:025240079 0 W/25240079-25240079 FN3875-S SNP C -> G AC=2;AN=158;BQB=0.983988;DP=2475;DP4=1049,1271,14,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.29346e-20;MQSB=0.88758;RPB=0.616878;SGB=75.9465;VDB=0.693141;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.8:25243942 chr08:025243942 0 W/25243942-25243942 W502-3-4 Single Base Substitution A-T INTRON HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN445-S.SNP.8:25244716 chr08:025244716 0 W/25244716-25244716 FN445-S Single Base Substitution T-G INTRON HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN_807-3-1.SNP.8:25248643 chr08:025248643 0 W/25248643-25248643 FN_807-3-1 Single Base Substitution T-A HET LOC_Os08g39850 lipoxygenase, chloroplast precursor, putative, expressed SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1467-S.SNP.8:25256038 chr08:025256038 0 W/25256038-25256038 FN1467-S Single Base Substitution C-T INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN4038-S.SNP.8:25256225 chr08:025256225 0 W/25256225-25256225 FN4038-S SNP A -> T AC=1;AN=168;BQB=0.983425;DP=2603;DP4=1201,1271,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.67498e-10;MQSB=0.960863;RPB=0.0770109;SGB=78.7577;VDB=0.0887682;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.8:25259276 chr08:025259276 0 W/25259276-25259276 FN430-S Single Base Substitution G-T INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN2410.SNP.8:25262483 chr08:025262483 0 W/25262483-25262483 FN2410 SNP G -> A AC=1;AN=200;BQB=0.999053;DP=4914;DP4=2232,2407,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3016e-09;MQSB=0.998477;RPB=0.915608;SGB=40.2696;VDB=0.923033;EFF=INTRON(MODIFIER||||500|LOC_Os08g39870|protein_coding|CODING|LOC_Os08g39870.1|10|1) FN3668-S.SNP.8:25265670 chr08:025265670 0 W/25265670-25265670 FN3668-S SNP C -> A AC=1;AN=190;BQB=0.548946;DP=2677;DP4=1436,1113,15,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03131e-12;MQSB=0.831176;RPB=0.660212;SGB=38.983;VDB=0.596286;EFF=INTRON(MODIFIER||||500|LOC_Os08g39870|protein_coding|CODING|LOC_Os08g39870.1|6|1) FN3668-S.SNP.8:25265672 chr08:025265672 0 W/25265672-25265672 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.917134;DP=2677;DP4=1435,1050,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22396e-13;MQSB=0.891202;RPB=0.479693;SGB=60.9777;VDB=0.456643;EFF=INTRON(MODIFIER||||500|LOC_Os08g39870|protein_coding|CODING|LOC_Os08g39870.1|6|1) FN3419-S.SNP.8:25291107 chr08:025291107 0 W/25291107-25291107 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.944551;DP=2842;DP4=1318,1459,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00175932;MQB=0.00036839;MQSB=0.773002;RPB=0.968789;SGB=44.2207;VDB=0.965232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A505T|890|LOC_Os08g39910|protein_coding|CODING|LOC_Os08g39910.1|3|1) FN2600-S.SNP.8:25297200 chr08:025297200 0 W/25297200-25297200 FN2600-S SNP G -> A AC=1;AN=198;BQB=0.457196;DP=2993;DP4=1652,1084,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000334113;MQB=0.00639772;MQSB=8.86372e-05;RPB=0.0100177;SGB=31.1689;VDB=0.0686942;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.8:25303922 chr08:025303922 0 W/25303922-25303922 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.978464;DP=2529;DP4=1300,1139,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.6216e-10;MQSB=0.952252;RPB=0.993175;SGB=50.3161;VDB=0.273955;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.8:25304134 chr08:025304134 0 W/25304134-25304134 FN497-S Single Base Substitution A-G INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN-210.SNP.8:25305251 chr08:025305251 0 W/25305251-25305251 FN-210 Single Base Substitution A-G INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3865-S.SNP.8:25308394 chr08:025308394 0 W/25308394-25308394 FN3865-S SNP C -> T AC=1;AN=158;BQB=0.995323;DP=2767;DP4=1356,1285,11,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.66102e-11;MQSB=0.785313;RPB=0.156643;SGB=30.927;VDB=0.935775;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.8:25321132 chr08:025321132 0 W/25321132-25321132 FN-56 Single Base Substitution T-G INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-56.SNP.8:25321133 chr08:025321133 0 W/25321133-25321133 FN-56 Single Base Substitution G-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-56.SNP.8:25322829 chr08:025322829 0 W/25322829-25322829 FN-56 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g39970 ENT domain containing protein, expressed SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN456-S.SNP.8:25324692 chr08:025324692 0 W/25324692-25324692 FN456-S Single Base Substitution C-T INTRON HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2646-S.SNP.8:25324816 chr08:025324816 0 W/25324816-25324816 FN2646-S SNP A -> G AC=1;AN=200;BQB=0.68825;DP=4909;DP4=2522,2208,19,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24317e-15;MQSB=0.915181;RPB=0.669511;SGB=-38.869;VDB=0.563269;EFF=INTRON(MODIFIER||||272|LOC_Os08g39970|protein_coding|CODING|LOC_Os08g39970.1|7|1) FN-350.SNP.8:25324899 chr08:025324899 0 W/25324899-25324899 FN-350 Single Base Substitution T-G INTRON HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN783-S.SNP.8:25330319 chr08:025330319 0 W/25330319-25330319 FN783-S Single Base Substitution G-T INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN879-S.SNP.8:25331256 chr08:025331256 0 W/25331256-25331256 FN879-S Single Base Substitution C-T INTERGENIC HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN2553-S.SNP.8:25355502 chr08:025355502 0 W/25355502-25355502 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.991133;DP=3497;DP4=1700,1643,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0;MQB=4.03848e-07;MQSB=0.030316;RPB=0.86862;SGB=67.9293;VDB=0.431665;EFF=INTRON(MODIFIER||||268|LOC_Os08g40040|protein_coding|CODING|LOC_Os08g40040.1|4|1) FN1212-S.SNP.8:25357486 chr08:025357486 0 W/25357486-25357486 FN1212-S Single Base Substitution T-C INTRON HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1585-S.SNP.8:25365288 chr08:025365288 0 W/25365288-25365288 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1585-S.SNP.8:25365289 chr08:025365289 0 W/25365289-25365289 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN753-S.SNP.8:25370559 chr08:025370559 0 W/25370559-25370559 FN753-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os08g40070 expressed protein SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2673-S.SNP.8:25376111 chr08:025376111 0 W/25376111-25376111 FN2673-S SNP A -> G AC=2;AN=200;BQB=0.320098;DP=5274;DP4=2619,2438,24,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.3098e-34;MQSB=0.997433;RPB=0.964707;SGB=270.708;VDB=0.631405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.8:25380563 chr08:025380563 0 W/25380563-25380563 FN2337 SNP C -> A AC=1;AN=192;BQB=0.586379;DP=4182;DP4=1866,2054,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.2088e-06;MQSB=0.406124;RPB=0.743251;SGB=26.3496;VDB=0.933115;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V10|576|LOC_Os08g40090|protein_coding|CODING|LOC_Os08g40090.1|1|1) FN2136-S.SNP.8:25383422 chr08:025383422 0 W/25383422-25383422 FN2136-S SNP C -> A AC=1;AN=168;BQB=0.184998;DP=3516;DP4=1914,1556,21,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.12416e-12;MQSB=0.915334;RPB=0.994177;SGB=-10.6335;VDB=0.738506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.8:25390692 chr08:025390692 0 W/25390692-25390692 FN3711-S SNP C -> G AC=1;AN=190;BQB=0.715918;DP=2817;DP4=1415,1315,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53025e-08;MQSB=0.788349;RPB=0.0896452;SGB=76.4186;VDB=0.00315792;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D147H|327|LOC_Os08g40110|protein_coding|CODING|LOC_Os08g40110.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D277H|457|LOC_Os08g40110|protein_coding|CODING|LOC_Os08g40110.2|2|1) FN2305.SNP.8:25395413 chr08:025395413 0 W/25395413-25395413 FN2305 SNP T -> A AC=1;AN=192;BQB=0.946154;DP=3824;DP4=1630,1769,4,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.58305e-07;MQSB=0.848588;RPB=0.968114;SGB=53.7748;VDB=0.835814;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A25|255|LOC_Os08g40120|protein_coding|CODING|LOC_Os08g40120.1|1|1) FN2758-S.SNP.8:25395471 chr08:025395471 0 W/25395471-25395471 FN2758-S SNP G -> A AC=1;AN=200;BQB=0.996899;DP=4355;DP4=2154,1887,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.82291e-09;MQSB=0.893132;RPB=0.889578;SGB=68.0801;VDB=0.281015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E45K|255|LOC_Os08g40120|protein_coding|CODING|LOC_Os08g40120.1|1|1) FN2182-S.SNP.8:25400341 chr08:025400341 0 W/25400341-25400341 FN2182-S SNP C -> A AC=1;AN=190;BQB=0.868831;DP=4259;DP4=2034,1992,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.77721e-10;MQSB=0.449342;RPB=0.149128;SGB=90.0802;VDB=0.703561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N60K|82|LOC_Os08g40130|protein_coding|CODING|LOC_Os08g40130.1|2|1) FN1136-S.SNP.8:25413684 chr08:025413684 0 W/25413684-25413684 FN1136-S Single Base Substitution C-T INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN-102.SNP.8:25415163 chr08:025415163 0 W/25415163-25415163 FN-102 Single Base Substitution C-T INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN2774-S.SNP.8:25416729 chr08:025416729 0 W/25416729-25416729 FN2774-S SNP T -> C AC=2;AN=198;BQB=0.905975;DP=4081;DP4=2042,1793,20,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.42189e-25;MQSB=0.965936;RPB=0.369853;SGB=148.003;VDB=0.0591721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F91S|242|LOC_Os08g40160|protein_coding|CODING|LOC_Os08g40160.1|3|1) FN902-S.SNP.8:25431973 chr08:025431973 0 W/25431973-25431973 FN902-S Single Base Substitution C-A INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN3531-S.SNP.8:25435071 chr08:025435071 0 W/25435071-25435071 FN3531-S SNP G -> A AC=2;AN=188;BQB=0.706014;DP=2992;DP4=1297,1537,8,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.80728e-08;MQSB=0.301225;RPB=0.931941;SGB=7.0815;VDB=0.662876;EFF=INTRON(MODIFIER||||100|LOC_Os08g40190|protein_coding|CODING|LOC_Os08g40190.1|1|1) FN2219-S.SNP.8:25435292 chr08:025435292 0 W/25435292-25435292 FN2219-S SNP T -> C AC=1;AN=190;BQB=0.93644;DP=4675;DP4=2126,2279,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.95288e-14;MQSB=0.793257;RPB=0.771608;SGB=78.7471;VDB=0.131808;EFF=INTRON(MODIFIER||||100|LOC_Os08g40190|protein_coding|CODING|LOC_Os08g40190.1|1|1) FN2150-S.SNP.8:25436771 chr08:025436771 0 W/25436771-25436771 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.00191766;DP=3973;DP4=1513,2407,20,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.87884e-12;MQSB=0.947399;RPB=0.166769;SGB=-316.868;VDB=0.517582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.8:25452213 chr08:025452213 0 W/25452213-25452213 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.613215;DP=4868;DP4=2430,2127,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66573e-13;MQSB=0.765698;RPB=0.923702;SGB=50.3263;VDB=0.825912;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.8:25462514 chr08:025462514 0 W/25462514-25462514 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.9751;DP=2329;DP4=1220,1040,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.86774e-09;MQSB=0.999897;RPB=0.947607;SGB=56.7575;VDB=0.59783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A301V|1440|LOC_Os08g40250|protein_coding|CODING|LOC_Os08g40250.1|1|1) FN4258-S.SNP.8:25462522 chr08:025462522 0 W/25462522-25462522 FN4258-S SNP A -> T AC=1;AN=170;BQB=0.996025;DP=2368;DP4=1215,1025,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.93914e-08;MQSB=0.998259;RPB=0.973566;SGB=47.8722;VDB=0.832668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I304F|1440|LOC_Os08g40250|protein_coding|CODING|LOC_Os08g40250.1|1|1) FN3632-S.SNP.8:25465930 chr08:025465930 0 W/25465930-25465930 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.995054;DP=2985;DP4=1403,1495,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36827e-05;MQSB=0.990494;RPB=0.665429;SGB=30.8803;VDB=0.691871;EFF=INTRON(MODIFIER||||1440|LOC_Os08g40250|protein_coding|CODING|LOC_Os08g40250.1|5|1) FN1667-S.SNP.8:25473788 chr08:025473788 0 W/25473788-25473788 FN1667-S SNP T -> C AC=2;AN=188;BQB=0.980354;DP=2789;DP4=1585,1138,25,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.3186e-15;MQSB=0.961074;RPB=0.959943;SGB=34.8608;VDB=0.882317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.8:25473788 chr08:025473788 0 W/25473788-25473788 FN3938-S SNP T -> C AC=1;AN=158;BQB=0.737818;DP=2219;DP4=1059,1069,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.66631e-05;MQSB=0.997448;RPB=0.915127;SGB=20.5959;VDB=0.989471;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.8:25473788 chr08:025473788 0 W/25473788-25473788 FN829-S Single Base Substitution T-C INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN3426-S.SNP.8:25480274 chr08:025480274 0 W/25480274-25480274 FN3426-S SNP A -> G AC=2;AN=184;BQB=0.752813;DP=2892;DP4=1379,1400,15,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.89281e-14;MQSB=0.943482;RPB=0.999758;SGB=81.5311;VDB=0.882887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.8:25484182 chr08:025484182 0 W/25484182-25484182 FN2539-S SNP C -> T AC=1;AN=198;BQB=0.549186;DP=4571;DP4=2221,2131,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.2726e-10;MQSB=0.758315;RPB=0.45594;SGB=67.9293;VDB=0.456713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R476W|1140|LOC_Os08g40260|protein_coding|CODING|LOC_Os08g40260.1|4|1) FN4009-S.SNP.8:25489438 chr08:025489438 0 W/25489438-25489438 FN4009-S SNP A -> G AC=1;AN=168;BQB=0.886831;DP=2264;DP4=1010,1018,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.07221e-06;MQSB=0.57138;RPB=0.396445;SGB=-37.7974;VDB=0.930323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.8:25491054 chr08:025491054 0 W/25491054-25491054 FN2449 SNP G -> A AC=1;AN=200;BQB=0.862754;DP=4824;DP4=2213,2379,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12693e-08;MQSB=0.976282;RPB=0.999825;SGB=36.6644;VDB=0.362593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.8:25492835 chr08:025492835 0 W/25492835-25492835 FN3826-S SNP T -> C AC=1;AN=190;BQB=0.93776;DP=2806;DP4=1285,1400,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.4704e-08;MQSB=0.99044;RPB=0.672887;SGB=26.2136;VDB=0.994109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.8:25505979 chr08:025505979 0 W/25505979-25505979 FN2366 SNP C -> A AC=1;AN=192;BQB=0.450139;DP=4947;DP4=2303,2443,15,6;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0187993;MQB=0.0096163;MQSB=0.0937525;RPB=0.964725;SGB=-11.9469;VDB=0.826263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K731N|952|LOC_Os08g40290|protein_coding|CODING|LOC_Os08g40290.1|4|1) FN430-S.SNP.8:25511045 chr08:025511045 0 W/25511045-25511045 FN430-S Single Base Substitution T-C INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1394-S.SNP.8:25512125 chr08:025512125 0 W/25512125-25512125 FN1394-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3959-S.SNP.8:25515553 chr08:025515553 0 W/25515553-25515553 FN3959-S SNP G -> C AC=1;AN=168;BQB=0.985148;DP=2335;DP4=1217,978,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000428266;MQB=0.0468538;MQSB=0.536727;RPB=0.412438;SGB=24.4556;VDB=0.450065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.8:25516915 chr08:025516915 0 W/25516915-25516915 FN2386 SNP T -> C AC=1;AN=192;BQB=0.21864;DP=5138;DP4=2596,2318,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000583885;MQB=2.81817e-05;MQSB=1.06699e-07;RPB=0.993124;SGB=82.5522;VDB=0.804046;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.8:25519249 chr08:025519249 0 W/25519249-25519249 FN4184-S SNP A -> G AC=1;AN=170;BQB=0.987072;DP=2554;DP4=1194,1293,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0399374;MQB=0.0357867;MQSB=2.20379e-05;RPB=0.99998;SGB=61.2001;VDB=0.520953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C888R|1043|LOC_Os08g40310|protein_coding|CODING|LOC_Os08g40310.1|14|1) FN2107-S.SNP.8:25527629 chr08:025527629 0 W/25527629-25527629 FN2107-S SNP A -> C AC=1;AN=168;BQB=0.252961;DP=3524;DP4=1728,1760,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.00170261;MQB=0.924835;MQSB=0.746805;RPB=0.948502;SGB=-11.926;VDB=0.890598;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.8:25534117 chr08:025534117 0 W/25534117-25534117 FN-190 Single Base Substitution C-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN4206-S.SNP.8:25536255 chr08:025536255 0 W/25536255-25536255 FN4206-S SNP A -> T AC=1;AN=170;BQB=0.988492;DP=2407;DP4=1135,1107,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000755748;MQSB=0.999618;RPB=0.812331;SGB=25.6601;VDB=0.548241;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.8:25536297 chr08:025536297 0 W/25536297-25536297 FN446-S Single Base Substitution C-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2606-S.SNP.8:25539838 chr08:025539838 0 W/25539838-25539838 FN2606-S SNP C -> T AC=1;AN=198;BQB=0.785649;DP=3684;DP4=1766,1703,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00250866;MQSB=0.871452;RPB=0.807715;SGB=3.39411;VDB=0.739149;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L131|710|LOC_Os08g40340|protein_coding|CODING|LOC_Os08g40340.1|1|1) FN2217-S.SNP.8:25557963 chr08:025557963 0 W/25557963-25557963 FN2217-S SNP A -> T AC=1;AN=190;BQB=0.00272779;DP=4235;DP4=1576,1941,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00227773;MQSB=0.00010817;RPB=0.797045;SGB=-138.175;VDB=0.474717;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.8:25559460 chr08:025559460 0 W/25559460-25559460 FN494-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os08g40370 retrotransposon protein, putative, unclassified, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN4123-S.SNP.8:25563628 chr08:025563628 0 W/25563628-25563628 FN4123-S SNP G -> A AC=2;AN=182;BQB=0.960693;DP=3213;DP4=1606,1512,16,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.33851e-17;MQSB=0.880946;RPB=0.390954;SGB=134.329;VDB=0.332581;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.8:25577210 chr08:025577210 0 W/25577210-25577210 FN3964-S SNP C -> T AC=1;AN=168;BQB=0.156075;DP=1722;DP4=745,856,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=13;MQ0F=0.448897;MQB=0.0180864;MQSB=0;RPB=0.997882;SGB=78.7577;VDB=0.288373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.8:25581628 chr08:025581628 0 W/25581628-25581628 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.650613;DP=4681;DP4=2255,2148,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63038e-18;MQSB=0.0436046;RPB=0.603738;SGB=76.378;VDB=0.533365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.8:25588496 chr08:025588496 0 W/25588496-25588496 FN2549-S SNP C -> T AC=1;AN=198;BQB=0.814808;DP=4340;DP4=2247,1904,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000230415;MQB=3.11103e-06;MQSB=0.919714;RPB=0.0850885;SGB=22.1736;VDB=0.0901266;EFF=UTR_3_PRIME(MODIFIER||720||333|LOC_Os08g40430|protein_coding|CODING|LOC_Os08g40430.1|2|1),INTRON(MODIFIER||||538|LOC_Os08g40420|protein_coding|CODING|LOC_Os08g40420.1|11|1),INTRON(MODIFIER||||486|LOC_Os08g40420|protein_coding|CODING|LOC_Os08g40420.2|10|1) FN3514-S.SNP.8:25590629 chr08:025590629 0 W/25590629-25590629 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.143336;DP=2486;DP4=1040,1321,2,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000718371;MQSB=0.999996;RPB=0.976797;SGB=32.441;VDB=0.407317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2404.SNP.8:25599946 chr08:025599946 0 W/25599946-25599946 FN2404 SNP G -> A AC=1;AN=200;BQB=0.997269;DP=3879;DP4=1958,1572,22,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62053e-16;MQSB=0.292765;RPB=0.61226;SGB=101.557;VDB=0.279286;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R328*|382|LOC_Os08g40460|protein_coding|CODING|LOC_Os08g40460.1|2|1) FN2560-S.SNP.8:25612009 chr08:025612009 0 W/25612009-25612009 FN2560-S SNP C -> G AC=1;AN=198;BQB=0.724832;DP=4376;DP4=2142,1985,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000228519;MQB=1.4188e-05;MQSB=0.988489;RPB=0.342556;SGB=25.7687;VDB=0.348463;EFF=INTRON(MODIFIER||||502|LOC_Os08g40490|protein_coding|CODING|LOC_Os08g40490.1|2|1) FN1345-S.SNP.8:25612133 chr08:025612133 0 W/25612133-25612133 FN1345-S Single Base Substitution A-C INTRON HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1345-S.SNP.8:25612134 chr08:025612134 0 W/25612134-25612134 FN1345-S Single Base Substitution G-C INTRON HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2653-S.SNP.8:25612749 chr08:025612749 0 W/25612749-25612749 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.318585;DP=4879;DP4=2499,2110,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82498e-15;MQSB=0.941303;RPB=0.264445;SGB=76.3213;VDB=0.793155;EFF=INTRON(MODIFIER||||502|LOC_Os08g40490|protein_coding|CODING|LOC_Os08g40490.1|2|1) FN389-S.SNP.8:25614988 chr08:025614988 0 W/25614988-25614988 FN389-S Single Base Substitution G-T INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2392.SNP.8:25623436 chr08:025623436 0 W/25623436-25623436 FN2392 SNP A -> T AC=1;AN=200;BQB=0.989363;DP=4677;DP4=2112,2276,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.1592e-14;MQSB=0.990793;RPB=0.716679;SGB=79.9264;VDB=0.170898;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.8:25623437 chr08:025623437 0 W/25623437-25623437 FN2392 SNP C -> T AC=1;AN=200;BQB=0.986847;DP=4683;DP4=2132,2261,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27865e-14;MQSB=0.998855;RPB=0.98661;SGB=83.5316;VDB=0.162683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.8:25629568 chr08:025629568 0 W/25629568-25629568 FN3433-S SNP C -> G AC=1;AN=184;BQB=0.815151;DP=3315;DP4=1206,1986,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.7935e-13;MQSB=0.995538;RPB=0.952808;SGB=89.4385;VDB=0.975184;EFF=UTR_5_PRIME(MODIFIER||23||126|LOC_Os08g40500|protein_coding|CODING|LOC_Os08g40500.1|1|1) FN490-S.SNP.8:25643283 chr08:025643283 0 W/25643283-25643283 FN490-S Single Base Substitution C-T INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN_789-3-1.SNP.8:25652221 chr08:025652221 0 W/25652221-25652221 FN_789-3-1 Single Base Substitution C-T UTR_3_PRIME HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1725-S.SNP.8:25663810 chr08:025663810 0 W/25663810-25663810 FN1725-S SNP C -> T AC=2;AN=188;BQB=0.643625;DP=1752;DP4=1158,559,11,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.77488e-09;MQSB=0.981022;RPB=0.630983;SGB=35.9843;VDB=0.167079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.8:25664162 chr08:025664162 0 W/25664162-25664162 FN1380-S Single Base Substitution T-A INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3437-S.SNP.8:25669253 chr08:025669253 0 W/25669253-25669253 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.999815;DP=4266;DP4=2148,2025,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=19;MQ0F=0.332161;MQB=0.176024;MQSB=0;RPB=0.161819;SGB=75.8731;VDB=0.293208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1379L|1549|LOC_Os08g40550|protein_coding|CODING|LOC_Os08g40550.1|3|1) FN1283-S.SNP.8:25677015 chr08:025677015 0 W/25677015-25677015 FN1283-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN927-S.SNP.8:25677846 chr08:025677846 0 W/25677846-25677846 FN927-S Single Base Substitution C-T INTRON HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN4189-S.SNP.8:25684591 chr08:025684591 0 W/25684591-25684591 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.914261;DP=2593;DP4=1169,1349,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.57561e-09;MQSB=0.997133;RPB=0.424899;SGB=38.3207;VDB=0.63001;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q241*|371|LOC_Os08g40570|protein_coding|CODING|LOC_Os08g40570.1|6|1);LOF=(LOC_Os08g40570|LOC_Os08g40570|1|1.00);NMD=(LOC_Os08g40570|LOC_Os08g40570|1|1.00) FN3437-S.SNP.8:25694596 chr08:025694596 0 W/25694596-25694596 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.998304;DP=3335;DP4=1445,1722,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.86209e-07;MQSB=0.409533;RPB=0.667474;SGB=18.2315;VDB=0.982866;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.8:25696213 chr08:025696213 0 W/25696213-25696213 FN1634-S Single Base Substitution T-A INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN_955-1.SNP.8:25701500 chr08:025701500 0 W/25701500-25701500 FN_955-1 Single Base Substitution G-A HET LOC_Os08g40600 thaumatin, putative, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN1561-S.SNP.8:25703346 chr08:025703346 0 W/25703346-25703346 FN1561-S Single Base Substitution A-T INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3916-S.SNP.8:25704721 chr08:025704721 0 W/25704721-25704721 FN3916-S SNP G -> T AC=1;AN=158;BQB=0.667071;DP=2257;DP4=1189,991,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.11706e-06;MQSB=0.83742;RPB=0.529949;SGB=47.0672;VDB=0.925504;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.8:25705062 chr08:025705062 0 W/25705062-25705062 FN976-S Single Base Substitution G-A INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN710-S.SNP.8:25705362 chr08:025705362 0 W/25705362-25705362 FN710-S Single Base Substitution T-A INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN-151.SNP.8:25712684 chr08:025712684 0 W/25712684-25712684 FN-151 Single Base Substitution T-C INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN710-S.SNP.8:25714714 chr08:025714714 0 W/25714714-25714714 FN710-S Single Base Substitution G-A INTRON HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN1667-S.SNP.8:25718786 chr08:025718786 0 W/25718786-25718786 FN1667-S SNP A -> T AC=2;AN=188;BQB=0.999995;DP=2890;DP4=1352,1484,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.06906e-12;MQSB=0.957225;RPB=0.398117;SGB=22.5144;VDB=0.104219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.8:25718786 chr08:025718786 0 W/25718786-25718786 FN3938-S SNP A -> T AC=1;AN=158;BQB=0.945797;DP=2909;DP4=1279,1495,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.52601e-06;MQSB=0.998254;RPB=0.978458;SGB=37.4429;VDB=0.162373;EFF=INTERGENIC(MODIFIER||||||||||1) FN829-S.SNP.8:25718786 chr08:025718786 0 W/25718786-25718786 FN829-S Single Base Substitution A-T INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2784-S.SNP.8:25722962 chr08:025722962 0 W/25722962-25722962 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.218338;DP=4203;DP4=2008,1942,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.21715e-17;MQSB=0.934427;RPB=0.0561264;SGB=94.0758;VDB=0.175255;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.8:25725801 chr08:025725801 0 W/25725801-25725801 FN964-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g40640 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2322.SNP.8:25725934 chr08:025725934 0 W/25725934-25725934 FN2322 SNP C -> T AC=2;AN=192;BQB=0.976926;DP=5530;DP4=2665,2604,21,14;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0846293;MQB=0.177059;MQSB=0.0113342;RPB=0.177479;SGB=114.631;VDB=0.0572899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V946I|1726|LOC_Os08g40640|protein_coding|CODING|LOC_Os08g40640.1|6|1) FN585-S.SNP.8:25731177 chr08:025731177 0 W/25731177-25731177 FN585-S Single Base Substitution G-C INTRON HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN691-S.SNP.8:25748033 chr08:025748033 0 W/25748033-25748033 FN691-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g40660 retrotransposon protein, putative, unclassified, expressed SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2266-S.SNP.8:25748565 chr08:025748565 0 W/25748565-25748565 FN2266-S SNP A -> G AC=2;AN=190;BQB=0.935768;DP=4463;DP4=2157,2019,18,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000896258;MQB=8.99642e-16;MQSB=0.982758;RPB=0.714562;SGB=92.9626;VDB=0.383327;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F128|825|LOC_Os08g40660|protein_coding|CODING|LOC_Os08g40660.1|4|1) FN3412-S.SNP.8:25750023 chr08:025750023 0 W/25750023-25750023 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.964447;DP=2979;DP4=1497,1414,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.4838e-06;MQSB=0.937002;RPB=0.881651;SGB=35.1773;VDB=0.678652;EFF=INTRON(MODIFIER||||825|LOC_Os08g40660|protein_coding|CODING|LOC_Os08g40660.1|1|1) FN2660-S.SNP.8:25750222 chr08:025750222 0 W/25750222-25750222 FN2660-S SNP T -> C AC=1;AN=200;BQB=0.999462;DP=4674;DP4=2150,2302,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5221e-10;MQSB=0.943886;RPB=0.307098;SGB=37.3004;VDB=0.505585;EFF=INTRON(MODIFIER||||825|LOC_Os08g40660|protein_coding|CODING|LOC_Os08g40660.1|1|1) FN4047-S.SNP.8:25750590 chr08:025750590 0 W/25750590-25750590 FN4047-S SNP G -> C AC=2;AN=168;BQB=0.996927;DP=2947;DP4=1396,1386,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.249e-13;MQSB=0.98851;RPB=0.903827;SGB=96.481;VDB=0.812433;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.8:25750591 chr08:025750591 0 W/25750591-25750591 FN4047-S SNP C -> T AC=2;AN=168;BQB=0.917605;DP=2935;DP4=1417,1357,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23565e-13;MQSB=0.984821;RPB=0.904302;SGB=69.0561;VDB=0.768193;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.8:25751145 chr08:025751145 0 W/25751145-25751145 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2479.SNP.8:25751840 chr08:025751840 0 W/25751840-25751840 FN2479 SNP C -> A AC=1;AN=200;BQB=0.612959;DP=5187;DP4=2545,2259,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.44809e-16;MQSB=0.836463;RPB=0.805972;SGB=127.947;VDB=0.145971;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.8:25752811 chr08:025752811 0 W/25752811-25752811 FN3790-S SNP C -> A AC=2;AN=190;BQB=0.752684;DP=2701;DP4=1294,1307,18,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44047e-21;MQSB=0.73882;RPB=0.440704;SGB=158.388;VDB=0.813827;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E172D|468|LOC_Os08g40670|protein_coding|CODING|LOC_Os08g40670.1|1|1) FN3548-S.SNP.8:25757630 chr08:025757630 0 W/25757630-25757630 FN3548-S SNP A -> G AC=1;AN=188;BQB=0.932704;DP=2676;DP4=1273,1291,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.83559e-06;MQSB=0.496205;RPB=0.461426;SGB=32.441;VDB=0.68905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.8:25760075 chr08:025760075 0 W/25760075-25760075 FN1257-S Single Base Substitution C-G INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3713-S.SNP.8:25768831 chr08:025768831 0 W/25768831-25768831 FN3713-S SNP G -> A AC=1;AN=190;BQB=0.925169;DP=2927;DP4=1640,1167,15,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61288e-09;MQSB=0.654653;RPB=0.988702;SGB=76.4186;VDB=0.240374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T8M|397|LOC_Os08g40710|protein_coding|CODING|LOC_Os08g40710.1|1|1) FN-379.SNP.8:25772552 chr08:025772552 0 W/25772552-25772552 FN-379 Single Base Substitution T-G INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1276-S.SNP.8:25773116 chr08:025773116 0 W/25773116-25773116 FN1276-S Single Base Substitution T-G INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3864-S.SNP.8:25773294 chr08:025773294 0 W/25773294-25773294 FN3864-S SNP G -> A AC=1;AN=158;BQB=0.404516;DP=2271;DP4=1164,971,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0;MQB=0.154676;MQSB=0.980993;RPB=0.773028;SGB=64.5449;VDB=0.474717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.8:25776943 chr08:025776943 0 W/25776943-25776943 FN1550-S Single Base Substitution G-A INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN-193.SNP.8:25781257 chr08:025781257 0 W/25781257-25781257 FN-193 Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN-204.SNP.8:25788984 chr08:025788984 0 W/25788984-25788984 FN-204 Single Base Substitution G-C INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN3421-S.SNP.8:25795330 chr08:025795330 0 W/25795330-25795330 FN3421-S SNP A -> T AC=2;AN=184;BQB=0.981713;DP=2381;DP4=1294,1019,10,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.01441e-10;MQSB=0.999993;RPB=0.967298;SGB=53.3568;VDB=0.491433;EFF=INTRON(MODIFIER||||197|LOC_Os08g40780|protein_coding|CODING|LOC_Os08g40780.1|4|1) FN1516-S.SNP.8:25797826 chr08:025797826 0 W/25797826-25797826 FN1516-S Single Base Substitution T-G INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN710-S.SNP.8:25803115 chr08:025803115 0 W/25803115-25803115 FN710-S Single Base Substitution G-C INTRON HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN4279-S.SNP.8:25806282 chr08:025806282 0 W/25806282-25806282 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.872085;DP=2461;DP4=1162,1209,6,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.84965e-12;MQSB=0.820681;RPB=0.941311;SGB=78.9707;VDB=0.312961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.8:25808646 chr08:025808646 0 W/25808646-25808646 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.797916;DP=3820;DP4=1888,1836,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.0753927;MQB=0.946658;MQSB=1.83585e-13;RPB=0.992507;SGB=63.9222;VDB=0.958929;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L255|1941|LOC_Os08g40800|protein_coding|CODING|LOC_Os08g40800.1|1|1) FN4153-S.SNP.8:25815553 chr08:025815553 0 W/25815553-25815553 FN4153-S SNP G -> A AC=1;AN=170;BQB=0.583249;DP=2220;DP4=946,1200,9,2;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0103604;MQB=0.00576327;MQSB=2.18662e-26;RPB=0.626798;SGB=27.9928;VDB=0.390615;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A19|311|LOC_Os08g40810|protein_coding|CODING|LOC_Os08g40810.1|1|1) FN4153-S.SNP.8:25815556 chr08:025815556 0 W/25815556-25815556 FN4153-S SNP C -> A AC=1;AN=170;BQB=0.833755;DP=2227;DP4=937,1212,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0103278;MQB=0.00165867;MQSB=4.37842e-26;RPB=0.93922;SGB=38.987;VDB=0.380974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E18D|311|LOC_Os08g40810|protein_coding|CODING|LOC_Os08g40810.1|1|1) FN2252-S.SNP.8:25815746 chr08:025815746 0 W/25815746-25815746 FN2252-S SNP C -> T AC=2;AN=190;BQB=0.71776;DP=3538;DP4=1604,1628,16,20;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.00960995;MQB=0.00322629;MQSB=3.45652e-11;RPB=0.928981;SGB=117.84;VDB=0.737357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2182-S.SNP.8:25816852 chr08:025816852 0 W/25816852-25816852 FN2182-S SNP C -> T AC=1;AN=190;BQB=0.506486;DP=4303;DP4=2178,1847,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0697188;MQB=0.884198;MQSB=0;RPB=0.218774;SGB=53.8699;VDB=0.664918;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.8:25820486 chr08:025820486 0 W/25820486-25820486 FN934-S Single Base Substitution A-G INTRON HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN1742-S.SNP.8:25829092 chr08:025829092 0 W/25829092-25829092 FN1742-S SNP C -> T AC=1;AN=188;BQB=0.0227892;DP=3561;DP4=1747,1746,5,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.73911e-07;MQSB=0.952217;RPB=0.947004;SGB=-153.343;VDB=0.396621;EFF=UTR_5_PRIME(MODIFIER||1985||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|1|1) FN2739-S.SNP.8:25830913 chr08:025830913 0 W/25830913-25830913 FN2739-S SNP G -> A AC=1;AN=200;BQB=0.235101;DP=5091;DP4=2238,2595,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.63337e-17;MQSB=0.837079;RPB=0.77798;SGB=83.5316;VDB=0.820274;EFF=SPLICE_SITE_DONOR(HIGH||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|2|1),SPLICE_SITE_DONOR(HIGH||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|2|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|2|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|2|1);LOF=(LOC_Os08g40830|LOC_Os08g40830|3|0.67) FN2739-S.SNP.8:25830914 chr08:025830914 0 W/25830914-25830914 FN2739-S SNP T -> A AC=1;AN=200;BQB=0.999522;DP=5093;DP4=2214,2596,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.0136e-19;MQSB=0.880714;RPB=0.678807;SGB=27.1468;VDB=0.785616;EFF=SPLICE_SITE_DONOR(HIGH||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|2|1),SPLICE_SITE_DONOR(HIGH||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|2|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|2|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|2|1);LOF=(LOC_Os08g40830|LOC_Os08g40830|3|0.67) FN2126-S.SNP.8:25831774 chr08:025831774 0 W/25831774-25831774 FN2126-S SNP G -> T AC=1;AN=168;BQB=0.996382;DP=3083;DP4=1620,1396,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.9363e-08;MQSB=0.962879;RPB=0.159788;SGB=29.4772;VDB=0.448738;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R233L|1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R233L|1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|3|1) FN3369-S.SNP.8:25833341 chr08:025833341 0 W/25833341-25833341 FN3369-S SNP C -> A AC=1;AN=184;BQB=0.411082;DP=1615;DP4=854,608,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000619195;MQB=3.04191e-09;MQSB=0.0829678;RPB=0.989044;SGB=8.32411;VDB=0.0677816;EFF=INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|5|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|5|1) FN2344.SNP.8:25836888 chr08:025836888 0 W/25836888-25836888 FN2344 SNP G -> A AC=1;AN=192;BQB=0.00082812;DP=3878;DP4=1535,1698,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000257865;MQB=2.38628e-05;MQSB=5.94621e-10;RPB=0.771884;SGB=-127.926;VDB=0.669495;EFF=UTR_5_PRIME(MODIFIER||907||1006|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.3|1|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|7|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|7|1) FN-137.SNP.8:25838273 chr08:025838273 0 W/25838273-25838273 FN-137 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g40830 pumilio domain-containing protein PPD1, putative, expressed SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2119-S.SNP.8:25838887 chr08:025838887 0 W/25838887-25838887 FN2119-S SNP G -> A AC=1;AN=168;BQB=0.143959;DP=4142;DP4=2114,1985,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10347e-06;MQSB=0.987521;RPB=0.889818;SGB=-87.7854;VDB=0.401718;EFF=INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.1|8|1),INTRON(MODIFIER||||1806|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.2|8|1),INTRON(MODIFIER||||1006|LOC_Os08g40830|protein_coding|CODING|LOC_Os08g40830.3|2|1) FN1374-S.SNP.8:25842605 chr08:025842605 0 W/25842605-25842605 FN1374-S Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2533-S.SNP.8:25845642 chr08:025845642 0 W/25845642-25845642 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.999198;DP=3354;DP4=1527,1550,10,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.74462e-06;MQSB=0.150405;RPB=0.188838;SGB=32.9588;VDB=0.13933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D604N|687|LOC_Os08g40840|protein_coding|CODING|LOC_Os08g40840.1|2|1) FN2650-S.SNP.8:25848861 chr08:025848861 0 W/25848861-25848861 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.999527;DP=5301;DP4=2491,2449,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92024e-15;MQSB=0.893044;RPB=0.753416;SGB=76.3213;VDB=0.350679;EFF=UTR_3_PRIME(MODIFIER||148||385|LOC_Os08g40850|protein_coding|CODING|LOC_Os08g40850.1|5|1) 703-2.SNP.8:25852501 chr08:025852501 0 W/25852501-25852501 703-2 Single Base Substitution G-A INTRON Homo SNo: 1451, Mutant_ID: 703-2, Generation: M2, Mutations: 24, Genes: 23, Seed availability: Yes. FN710-S.SNP.8:25865783 chr08:025865783 0 W/25865783-25865783 FN710-S Single Base Substitution G-A INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN3651-S.SNP.8:25866100 chr08:025866100 0 W/25866100-25866100 FN3651-S SNP A -> T AC=2;AN=190;BQB=0.949244;DP=2960;DP4=1334,1485,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16031e-11;MQSB=0.988892;RPB=0.156365;SGB=94.6341;VDB=0.0485956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.8:25890463 chr08:025890463 0 W/25890463-25890463 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.956011;DP=2708;DP4=1449,1115,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20158e-10;MQSB=0.999687;RPB=0.675853;SGB=80.9724;VDB=0.365226;EFF=UTR_5_PRIME(MODIFIER||806||160|LOC_Os08g40919|protein_coding|CODING|LOC_Os08g40919.1|1|1),UTR_5_PRIME(MODIFIER||806||140|LOC_Os08g40919|protein_coding|CODING|LOC_Os08g40919.2|1|1) FN2797-S.SNP.8:25904221 chr08:025904221 0 W/25904221-25904221 FN2797-S SNP A -> T AC=1;AN=198;BQB=0.930894;DP=4163;DP4=2050,1933,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.20193e-09;MQSB=0.915096;RPB=0.856563;SGB=77.1196;VDB=0.614743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.8:25905744 chr08:025905744 0 W/25905744-25905744 FN2097-S SNP A -> T AC=1;AN=168;BQB=0.445878;DP=4050;DP4=2198,1799,18,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07882e-11;MQSB=0.977815;RPB=0.725729;SGB=-10.6335;VDB=0.423309;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.8:25912353 chr08:025912353 0 W/25912353-25912353 FN772-S Single Base Substitution A-T INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2115-S.SNP.8:25915231 chr08:025915231 0 W/25915231-25915231 FN2115-S SNP C -> T AC=2;AN=168;BQB=0.958591;DP=2406;DP4=1145,1190,23,15;HOB=0.0235261;ICB=0.494119;MQ=34;MQ0F=0.112219;MQB=0.784508;MQSB=7.73662e-37;RPB=0.669232;SGB=35.6687;VDB=0.379019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.8:25915231 chr08:025915231 0 W/25915231-25915231 FN2473 SNP C -> T AC=2;AN=200;BQB=0.998256;DP=3239;DP4=2033,982,17,4;HOB=0.0198;ICB=0.495051;MQ=26;MQ0F=0.113615;MQB=0.553029;MQSB=0;RPB=0.628944;SGB=65.5058;VDB=0.195342;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.8:25915231 chr08:025915231 0 W/25915231-25915231 FN420-S Single Base Substitution C-T INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN1269-S.SNP.8:25918272 chr08:025918272 0 W/25918272-25918272 FN1269-S Single Base Substitution C-A INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2458.SNP.8:25925564 chr08:025925564 0 W/25925564-25925564 FN2458 SNP C -> A AC=2;AN=200;BQB=0.521576;DP=4625;DP4=2415,1802,18,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.04223e-20;MQSB=0.998188;RPB=0.859264;SGB=173.999;VDB=0.347496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.8:25947259 chr08:025947259 0 W/25947259-25947259 FN3463-S SNP T -> A AC=2;AN=184;BQB=0.997327;DP=3033;DP4=1625,1255,16,12;HOB=0.0215028;ICB=0.494625;MQ=30;MQ0F=0.109133;MQB=0.530831;MQSB=0;RPB=0.996167;SGB=88.5747;VDB=0.640454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y281F|1439|LOC_Os08g41020|protein_coding|CODING|LOC_Os08g41020.1|3|1) FN3560-S.SNP.8:25949454 chr08:025949454 0 W/25949454-25949454 FN3560-S SNP C -> T AC=1;AN=188;BQB=0.972882;DP=2767;DP4=1467,1214,4,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.69636e-11;MQSB=0.996987;RPB=0.918189;SGB=80.782;VDB=0.836201;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.8:25951792 chr08:025951792 0 W/25951792-25951792 FN-328 Single Base Substitution A-G INTERGENIC HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2562-S.SNP.8:25954157 chr08:025954157 0 W/25954157-25954157 FN2562-S SNP A -> C AC=1;AN=198;BQB=0.577053;DP=4246;DP4=2004,2038,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.15341e-19;MQSB=0.938738;RPB=0.98873;SGB=136.856;VDB=0.0222004;EFF=INTRON(MODIFIER||||260|LOC_Os08g41040|protein_coding|CODING|LOC_Os08g41040.1|1|1) FN621-S.SNP.8:25959797 chr08:025959797 0 W/25959797-25959797 FN621-S Single Base Substitution A-C INTRON HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2452.SNP.8:25965225 chr08:025965225 0 W/25965225-25965225 FN2452 SNP G -> A AC=1;AN=200;BQB=0.904916;DP=5069;DP4=2394,2320,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000394555;MQB=3.70021e-12;MQSB=0.455142;RPB=0.999971;SGB=104.921;VDB=0.425957;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P155S|1275|LOC_Os08g41070|protein_coding|CODING|LOC_Os08g41070.1|3|1) FN-124.SNP.8:25975678 chr08:025975678 0 W/25975678-25975678 FN-124 Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN3369-S.SNP.8:25984846 chr08:025984846 0 W/25984846-25984846 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.993473;DP=3706;DP4=1730,1727,20,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12197e-11;MQSB=0.823207;RPB=0.0212883;SGB=45.9712;VDB=0.15139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D145G|341|LOC_Os08g41120|protein_coding|CODING|LOC_Os08g41120.1|1|1) FN2432.SNP.8:25996438 chr08:025996438 0 W/25996438-25996438 FN2432 SNP C -> T AC=2;AN=200;BQB=0.937618;DP=3168;DP4=1192,1664,11,15;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00347222;MQB=0.00950435;MQSB=0.0195305;RPB=0.962833;SGB=114.132;VDB=0.423793;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.8:25997711 chr08:025997711 0 W/25997711-25997711 FN721-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os08g41150 MBTB30 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2661-S.SNP.8:26016603 chr08:026016603 0 W/26016603-26016603 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.539295;DP=4892;DP4=2409,2193,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32453e-11;MQSB=0.951103;RPB=0.301664;SGB=77.2904;VDB=0.120203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.8:26018087 chr08:026018087 0 W/26018087-26018087 FN3557-S SNP C -> A AC=1;AN=188;BQB=0.999985;DP=2894;DP4=1684,1113,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30494e-10;MQSB=0.920879;RPB=0.701951;SGB=80.782;VDB=0.294434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.8:26029597 chr08:026029597 0 W/26029597-26029597 FN3930-S SNP C -> T AC=1;AN=158;BQB=0.99425;DP=2592;DP4=1396,1079,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.14484e-06;MQSB=0.903943;RPB=0.983871;SGB=47.0672;VDB=0.740454;EFF=INTRON(MODIFIER||||596|LOC_Os08g41220|protein_coding|CODING|LOC_Os08g41220.1|4|1) FN1618-S.SNP.8:26029643 chr08:026029643 0 W/26029643-26029643 FN1618-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os08g41220 BTB/POZ domain containing protein, expressed SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1089-S.SNP.8:26038646 chr08:026038646 0 W/26038646-26038646 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2795-S.SNP.8:26041723 chr08:026041723 0 W/26041723-26041723 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.636839;DP=4261;DP4=2069,1966,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00187749;MQB=1.9242e-08;MQSB=0.325075;RPB=0.465623;SGB=37.1297;VDB=0.896457;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.8:26046333 chr08:026046333 0 W/26046333-26046333 FN-176 Single Base Substitution T-C INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2370.SNP.8:26061706 chr08:026061706 0 W/26061706-26061706 FN2370 SNP G -> A AC=2;AN=192;BQB=0.990867;DP=5463;DP4=2449,2585,36,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00018305;MQB=3.37645e-29;MQSB=0.973467;RPB=0.385527;SGB=73.0574;VDB=0.386628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.8:26066163 chr08:026066163 0 W/26066163-26066163 FN2279-S SNP A -> T AC=1;AN=190;BQB=0.917008;DP=5046;DP4=2012,2632,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.92958e-17;MQSB=0.984572;RPB=0.197942;SGB=103.624;VDB=0.00937493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R624W|1107|LOC_Os08g41270|protein_coding|CODING|LOC_Os08g41270.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R527W|1010|LOC_Os08g41270|protein_coding|CODING|LOC_Os08g41270.2|5|1) FN1339-S.SNP.8:26078573 chr08:026078573 0 W/26078573-26078573 FN1339-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.8:26078573 chr08:026078573 0 W/26078573-26078573 FN2311 SNP G -> T AC=2;AN=192;BQB=0.704123;DP=5269;DP4=2851,1998,31,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.78306e-25;MQSB=0.95618;RPB=0.348286;SGB=116.102;VDB=0.570369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.8:26081533 chr08:026081533 0 W/26081533-26081533 FN2487 SNP C -> T AC=2;AN=200;BQB=0.784119;DP=4894;DP4=2269,2307,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000204332;MQB=3.00216e-22;MQSB=0.990807;RPB=0.364121;SGB=94.6142;VDB=0.52084;EFF=INTERGENIC(MODIFIER||||||||||1) FN444-S.SNP.8:26083102 chr08:026083102 0 W/26083102-26083102 FN444-S Single Base Substitution C-A INTERGENIC HOMO SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1467-S.SNP.8:26083689 chr08:026083689 0 W/26083689-26083689 FN1467-S Single Base Substitution T-C INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1467-S.SNP.8:26083716 chr08:026083716 0 W/26083716-26083716 FN1467-S Single Base Substitution T-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2491.SNP.8:26087510 chr08:026087510 0 W/26087510-26087510 FN2491 SNP A -> C AC=1;AN=200;BQB=0.209703;DP=4428;DP4=1864,2118,10,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000225836;MQB=2.80059e-07;MQSB=2.51239e-16;RPB=0.623437;SGB=21.6694;VDB=0.0501844;EFF=UTR_3_PRIME(MODIFIER||87||263|LOC_Os08g41290|protein_coding|CODING|LOC_Os08g41290.1|1|1) FN829-S.SNP.8:26098392 chr08:026098392 0 W/26098392-26098392 FN829-S Single Base Substitution T-A INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN229-S.SNP.8:26109145 chr08:026109145 0 W/26109145-26109145 FN229-S Single Base Substitution C-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN-387.SNP.8:26112672 chr08:026112672 0 W/26112672-26112672 FN-387 Single Base Substitution T-C INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN-293.SNP.8:26115569 chr08:026115569 0 W/26115569-26115569 FN-293 Single Base Substitution C-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN3819-S.SNP.8:26116519 chr08:026116519 0 W/26116519-26116519 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.837845;DP=2587;DP4=1166,1310,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05354e-07;MQSB=0.979931;RPB=0.967491;SGB=23.6597;VDB=0.0208076;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.8:26119688 chr08:026119688 0 W/26119688-26119688 FN4279-S SNP A -> T AC=2;AN=170;BQB=0.770833;DP=2813;DP4=1167,1544,16,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.33236e-17;MQSB=0.946584;RPB=0.389353;SGB=89.9604;VDB=0.531315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.8:26120863 chr08:026120863 0 W/26120863-26120863 FN2259-S SNP T -> C AC=2;AN=190;BQB=0.621734;DP=4928;DP4=2615,1924,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.57699e-15;MQSB=0.877762;RPB=0.278129;SGB=108.296;VDB=0.0161368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I199V|216|LOC_Os08g41340|protein_coding|CODING|LOC_Os08g41340.1|2|1) FN1543-S.SNP.8:26123356 chr08:026123356 0 W/26123356-26123356 FN1543-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os08g41340 ras-related protein, putative, expressed SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN2422.SNP.8:26125055 chr08:026125055 0 W/26125055-26125055 FN2422 SNP C -> A AC=1;AN=200;BQB=0.894425;DP=4133;DP4=2051,1801,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.14019e-13;MQSB=0.834962;RPB=0.756434;SGB=45.1159;VDB=0.971826;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y137*|217|LOC_Os08g41350|protein_coding|CODING|LOC_Os08g41350.1|2|1) FN483-S.SNP.8:26125408 chr08:026125408 0 W/26125408-26125408 FN483-S Single Base Substitution T-C INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2271-S.SNP.8:26129226 chr08:026129226 0 W/26129226-26129226 FN2271-S SNP A -> T AC=1;AN=190;BQB=0.969058;DP=4895;DP4=2337,2264,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.92692e-08;MQSB=0.898736;RPB=0.428966;SGB=5.66499;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.8:26132043 chr08:026132043 0 W/26132043-26132043 FN584-S Single Base Substitution A-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1237-S.SNP.8:26134625 chr08:026134625 0 W/26134625-26134625 FN1237-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3818-S.SNP.8:26138114 chr08:026138114 0 W/26138114-26138114 FN3818-S SNP C -> A AC=1;AN=190;BQB=0.928472;DP=3016;DP4=1381,1395,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23526e-05;MQSB=0.912866;RPB=0.485282;SGB=49.0954;VDB=0.759713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.8:26169272 chr08:026169272 0 W/26169272-26169272 FN2687-S SNP G -> C AC=2;AN=200;BQB=0.999937;DP=4452;DP4=2488,1642,19,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.24981e-14;MQSB=6.98764e-05;RPB=0.275329;SGB=23.9365;VDB=0.0842468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.8:26174802 chr08:026174802 0 W/26174802-26174802 FN3519-S SNP G -> T AC=1;AN=188;BQB=0.708941;DP=3155;DP4=1680,1340,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.32504e-08;MQSB=0.946628;RPB=0.975874;SGB=31.1628;VDB=0.930323;EFF=INTRON(MODIFIER||||177|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.8|1|1) W598-2-1.SNP.8:26178150 chr08:026178150 0 W/26178150-26178150 W598-2-1 Single Base Substitution T-A INTRON HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. W598-2-1.SNP.8:26178151 chr08:026178151 0 W/26178151-26178151 W598-2-1 Single Base Substitution C-A INTRON HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2096-S.SNP.8:26182213 chr08:026182213 0 W/26182213-26182213 FN2096-S SNP C -> T AC=1;AN=168;BQB=0.13089;DP=3813;DP4=2268,1490,23,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.80039e-16;MQSB=0.966386;RPB=0.243724;SGB=-172.886;VDB=0.161216;EFF=INTRON(MODIFIER||||329|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.10|6|1),INTRON(MODIFIER||||329|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.1|6|1),INTRON(MODIFIER||||329|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.2|6|1),INTRON(MODIFIER||||275|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.3|6|1),INTRON(MODIFIER||||211|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.4|6|1),INTRON(MODIFIER||||211|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.6|5|1),INTRON(MODIFIER||||177|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.8|5|1),INTRON(MODIFIER||||177|LOC_Os08g41460|protein_coding|CODING|LOC_Os08g41460.9|5|1) FN3486-S.SNP.8:26194332 chr08:026194332 0 W/26194332-26194332 FN3486-S SNP T -> A AC=1;AN=184;BQB=0.97246;DP=3160;DP4=1355,1624,10,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.03169e-11;MQSB=0.191599;RPB=0.643017;SGB=51.0148;VDB=0.62587;EFF=INTRON(MODIFIER||||250|LOC_Os08g41470|protein_coding|CODING|LOC_Os08g41470.2|1|1|WARNING_TRANSCRIPT_NO_START_CODON),INTRON(MODIFIER||||292|LOC_Os08g41470|protein_coding|CODING|LOC_Os08g41470.1|1|1) FN2619-S.SNP.8:26195161 chr08:026195161 0 W/26195161-26195161 FN2619-S SNP C -> A AC=2;AN=198;BQB=0.0497267;DP=4296;DP4=1891,2085,35,40;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.79608e-39;MQSB=0.267145;RPB=0.111282;SGB=165.116;VDB=0.359952;EFF=INTRON(MODIFIER||||250|LOC_Os08g41470|protein_coding|CODING|LOC_Os08g41470.2|1|1|WARNING_TRANSCRIPT_NO_START_CODON),INTRON(MODIFIER||||292|LOC_Os08g41470|protein_coding|CODING|LOC_Os08g41470.1|1|1) FN4148-S.SNP.8:26196489 chr08:026196489 0 W/26196489-26196489 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.995145;DP=1943;DP4=746,1145,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.66933e-06;MQSB=0.968123;RPB=0.983883;SGB=21.1076;VDB=0.75912;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.8:26200837 chr08:026200837 0 W/26200837-26200837 W252-6-1 Single Base Substitution G-A INTRON HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN343-S.SNP.8:26207288 chr08:026207288 0 W/26207288-26207288 FN343-S Single Base Substitution C-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3928-S.SNP.8:26207866 chr08:026207866 0 W/26207866-26207866 FN3928-S SNP C -> A AC=2;AN=158;BQB=0.955429;DP=2453;DP4=1214,1129,12,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.82076e-19;MQSB=0.997515;RPB=0.997073;SGB=98.093;VDB=0.145975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.8:26224726 chr08:026224726 0 W/26224726-26224726 FN3717-S SNP T -> C AC=1;AN=190;BQB=0.953633;DP=3249;DP4=1140,1943,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.12488e-09;MQSB=0.928916;RPB=0.997761;SGB=26.2136;VDB=0.0229984;EFF=INTRON(MODIFIER||||175|LOC_Os08g41510|protein_coding|CODING|LOC_Os08g41510.1|2|1) FN1376-S.SNP.8:26226653 chr08:026226653 0 W/26226653-26226653 FN1376-S Single Base Substitution G-T INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2558-S.SNP.8:26234518 chr08:026234518 0 W/26234518-26234518 FN2558-S SNP T -> C AC=1;AN=198;BQB=0.971521;DP=4327;DP4=2152,1975,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.35362e-08;MQSB=0.970925;RPB=0.991178;SGB=58.7391;VDB=0.431328;EFF=INTRON(MODIFIER||||959|LOC_Os08g41530|protein_coding|CODING|LOC_Os08g41530.1|3|1) FN3407-S.SNP.8:26235522 chr08:026235522 0 W/26235522-26235522 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.637945;DP=2641;DP4=1242,1279,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.86222e-09;MQSB=0.804984;RPB=0.975285;SGB=20.7533;VDB=0.0374022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D621N|959|LOC_Os08g41530|protein_coding|CODING|LOC_Os08g41530.1|3|1) FN580-S.SNP.8:26240314 chr08:026240314 0 W/26240314-26240314 FN580-S Single Base Substitution C-A INTERGENIC HOMO SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3566-S.SNP.8:26241191 chr08:026241191 0 W/26241191-26241191 FN3566-S SNP C -> G AC=1;AN=188;BQB=0.994758;DP=2560;DP4=1189,1285,2,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.96628e-10;MQSB=0.957712;RPB=0.883445;SGB=23.5329;VDB=0.556976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G748A|869|LOC_Os08g41540|protein_coding|CODING|LOC_Os08g41540.1|2|1) FN3566-S.SNP.8:26241196 chr08:026241196 0 W/26241196-26241196 FN3566-S SNP T -> G AC=1;AN=188;BQB=0.611886;DP=2565;DP4=1203,1290,2,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.38652e-10;MQSB=0.944533;RPB=0.997814;SGB=43.0708;VDB=0.802417;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q746H|869|LOC_Os08g41540|protein_coding|CODING|LOC_Os08g41540.1|2|1) FN_769-4-1.SNP.8:26245064 chr08:026245064 0 W/26245064-26245064 FN_769-4-1 Single Base Substitution A-G HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN4206-S.SNP.8:26248236 chr08:026248236 0 W/26248236-26248236 FN4206-S SNP A -> C AC=1;AN=170;BQB=0.744419;DP=2367;DP4=1068,1235,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.26335e-06;MQSB=0.920708;RPB=0.970875;SGB=27.9928;VDB=0.649418;EFF=UTR_3_PRIME(MODIFIER||246||527|LOC_Os08g41550|protein_coding|CODING|LOC_Os08g41550.1|2|1) FN3566-S.SNP.8:26251481 chr08:026251481 0 W/26251481-26251481 FN3566-S SNP A -> T AC=1;AN=188;BQB=0.982608;DP=2341;DP4=997,1260,1,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.6941e-07;MQSB=0.442592;RPB=0.999986;SGB=32.441;VDB=0.244287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3982-S.SNP.8:26257550 chr08:026257550 0 W/26257550-26257550 FN3982-S SNP C -> A AC=1;AN=168;BQB=0.951476;DP=2938;DP4=1388,1385,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.07782e-06;MQSB=0.421346;RPB=0.287383;SGB=24.4556;VDB=0.245704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.8:26258565 chr08:026258565 0 W/26258565-26258565 FN2140-S SNP T -> C AC=1;AN=168;BQB=0.865041;DP=3186;DP4=1504,1648,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.16033e-14;MQSB=0.992424;RPB=0.910815;SGB=-42.3508;VDB=0.453078;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.8:26258566 chr08:026258566 0 W/26258566-26258566 FN2140-S SNP A -> T AC=1;AN=168;BQB=0.991212;DP=3164;DP4=1487,1646,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.22598e-14;MQSB=0.998488;RPB=0.820064;SGB=41.6313;VDB=0.69664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.8:26259094 chr08:026259094 0 W/26259094-26259094 FN2365 SNP G -> T AC=2;AN=192;BQB=0.405171;DP=4530;DP4=1913,2029,31,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.84257e-24;MQSB=0.41091;RPB=0.700435;SGB=-268.376;VDB=0.0400219;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.8:26259678 chr08:026259678 0 W/26259678-26259678 FN4124-S SNP T -> C AC=1;AN=182;BQB=0.99995;DP=2664;DP4=1522,1076,16,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.40069e-16;MQSB=0.970979;RPB=0.992786;SGB=77.758;VDB=0.803586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.8:26261737 chr08:026261737 0 W/26261737-26261737 FN1443-S Single Base Substitution C-T INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN981-S.SNP.8:26264972 chr08:026264972 0 W/26264972-26264972 FN981-S Single Base Substitution T-G INTRON HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN795-S.SNP.8:26265044 chr08:026265044 0 W/26265044-26265044 FN795-S Single Base Substitution A-T INTRON HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN-362.SNP.8:26273248 chr08:026273248 0 W/26273248-26273248 FN-362 Single Base Substitution A-G INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN982-S.SNP.8:26277771 chr08:026277771 0 W/26277771-26277771 FN982-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os08g41610 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN981-S.SNP.8:26292483 chr08:026292483 0 W/26292483-26292483 FN981-S Single Base Substitution C-T INTRON HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3631-S.SNP.8:26293275 chr08:026293275 0 W/26293275-26293275 FN3631-S SNP T -> C AC=1;AN=190;BQB=0.997168;DP=2728;DP4=1420,1251,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.19853e-07;MQSB=0.953435;RPB=0.133307;SGB=25.439;VDB=0.156654;EFF=INTRON(MODIFIER||||946|LOC_Os08g41630|protein_coding|CODING|LOC_Os08g41630.1|5|1) FN3780-S.SNP.8:26293563 chr08:026293563 0 W/26293563-26293563 FN3780-S SNP A -> C AC=1;AN=190;BQB=0.852105;DP=3059;DP4=1536,1434,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.82065e-06;MQSB=0.771864;RPB=0.997922;SGB=49.0954;VDB=0.323915;EFF=INTRON(MODIFIER||||946|LOC_Os08g41630|protein_coding|CODING|LOC_Os08g41630.1|5|1) FN2241-S.SNP.8:26296526 chr08:026296526 0 W/26296526-26296526 FN2241-S SNP T -> G AC=1;AN=190;BQB=0.951328;DP=4445;DP4=1777,2254,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52749e-05;MQSB=0.707979;RPB=0.988162;SGB=44.5415;VDB=0.552188;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A477|946|LOC_Os08g41630|protein_coding|CODING|LOC_Os08g41630.1|3|1) FN-344.SNP.8:26300723 chr08:026300723 0 W/26300723-26300723 FN-344 Single Base Substitution C-A INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. W450-6-1.SNP.8:26306390 chr08:026306390 0 W/26306390-26306390 W450-6-1 Single Base Substitution T-C INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3851-S.SNP.8:26309951 chr08:026309951 0 W/26309951-26309951 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.60162;DP=2561;DP4=1231,1234,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.28543e-08;MQSB=0.77769;RPB=0.666696;SGB=30.704;VDB=0.985893;EFF=INTRON(MODIFIER||||282|LOC_Os08g41670|protein_coding|CODING|LOC_Os08g41670.1|2|1) FN3851-S.SNP.8:26309953 chr08:026309953 0 W/26309953-26309953 FN3851-S SNP C -> A AC=1;AN=158;BQB=0.393697;DP=2577;DP4=1272,1223,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.29644e-08;MQSB=0.788151;RPB=0.979754;SGB=2.08615;VDB=0.994809;EFF=INTRON(MODIFIER||||282|LOC_Os08g41670|protein_coding|CODING|LOC_Os08g41670.1|2|1) FN-68.SNP.8:26312058 chr08:026312058 0 W/26312058-26312058 FN-68 Single Base Substitution T-C INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1006-S.SNP.8:26312058 chr08:026312058 0 W/26312058-26312058 FN1006-S Single Base Substitution T-C INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2395.SNP.8:26312058 chr08:026312058 0 W/26312058-26312058 FN2395 SNP T -> C AC=2;AN=200;BQB=0.981395;DP=4947;DP4=2387,2284,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.50026e-20;MQSB=0.969809;RPB=0.824296;SGB=112.373;VDB=0.291464;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.8:26312058 chr08:026312058 0 W/26312058-26312058 FN487-S Single Base Substitution T-C INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN_827-1.SNP.8:26312058 chr08:026312058 0 W/26312058-26312058 FN_827-1 Single Base Substitution T-C Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2260-S.SNP.8:26313995 chr08:026313995 0 W/26313995-26313995 FN2260-S SNP T -> C AC=1;AN=190;BQB=0.900456;DP=4195;DP4=2020,1658,20,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.90934e-14;MQSB=0.589998;RPB=0.102068;SGB=-108.329;VDB=0.262993;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.8:26317666 chr08:026317666 0 W/26317666-26317666 FN944-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN944-S.SNP.8:26317667 chr08:026317667 0 W/26317667-26317667 FN944-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g41690 expressed protein SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2668-S.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 FN2668-S SNP C -> T AC=2;AN=200;BQB=0.794313;DP=4891;DP4=2429,2019,31,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.78831e-29;MQSB=0.821031;RPB=0.878845;SGB=68.8812;VDB=0.922956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 FN3305-S SNP C -> T AC=1;AN=184;BQB=0.887312;DP=3190;DP4=1598,1466,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.48005e-08;MQSB=0.584455;RPB=0.99879;SGB=42.7914;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 FN4109-S SNP C -> T AC=1;AN=182;BQB=0.921962;DP=3171;DP4=1570,1466,11,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.83783e-11;MQSB=0.959183;RPB=0.346386;SGB=49.6712;VDB=0.116875;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 FN4258-S SNP C -> T AC=2;AN=170;BQB=0.991661;DP=2582;DP4=1278,1164,17,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.68943e-19;MQSB=0.83617;RPB=0.999998;SGB=114.059;VDB=0.666388;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 FN860-S Single Base Substitution C-T INTERGENIC HOMO SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. W481-5-1.SNP.8:26322774 chr08:026322774 0 W/26322774-26322774 W481-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-401.SNP.8:26323932 chr08:026323932 0 W/26323932-26323932 FN-401 Single Base Substitution T-C INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN1022-S.SNP.8:26323932 chr08:026323932 0 W/26323932-26323932 FN1022-S Single Base Substitution T-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3495-S.SNP.8:26323932 chr08:026323932 0 W/26323932-26323932 FN3495-S SNP T -> C AC=1;AN=188;BQB=0.894665;DP=2559;DP4=1181,1305,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.3952e-08;MQSB=0.981074;RPB=0.872829;SGB=32.441;VDB=0.677053;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.8:26323932 chr08:026323932 0 W/26323932-26323932 FN401-S Single Base Substitution T-C INTERGENIC HOMO SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN2607-S.SNP.8:26330576 chr08:026330576 0 W/26330576-26330576 FN2607-S SNP A -> T AC=1;AN=190;BQB=0.972648;DP=3874;DP4=1941,1714,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09622e-11;MQSB=0.975677;RPB=0.985968;SGB=9.3494;VDB=0.820707;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.8:26335308 chr08:026335308 0 W/26335308-26335308 FN804-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3579-S.SNP.8:26343416 chr08:026343416 0 W/26343416-26343416 FN3579-S SNP G -> A AC=2;AN=188;BQB=0.999945;DP=2815;DP4=1383,1342,15,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.28322e-15;MQSB=0.998127;RPB=0.819097;SGB=54.0524;VDB=0.0700037;EFF=INTRON(MODIFIER||||219|LOC_Os08g41730|protein_coding|CODING|LOC_Os08g41730.1|2|1) FN416-S.SNP.8:26360077 chr08:026360077 0 W/26360077-26360077 FN416-S Single Base Substitution C-T INTERGENIC HOMO SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN_777-2-1.SNP.8:26362668 chr08:026362668 0 W/26362668-26362668 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN-288.SNP.8:26364505 chr08:026364505 0 W/26364505-26364505 FN-288 Single Base Substitution C-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2177-S.SNP.8:26366926 chr08:026366926 0 W/26366926-26366926 FN2177-S SNP G -> A AC=2;AN=168;BQB=0.0356891;DP=3594;DP4=1660,1868,22,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.26913e-17;MQSB=0.97741;RPB=0.96826;SGB=-102.59;VDB=0.777831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.8:26372236 chr08:026372236 0 W/26372236-26372236 FN2584-S SNP A -> G AC=1;AN=186;BQB=0.732432;DP=4113;DP4=2093,1820,9,18;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.11042e-13;MQSB=0.986795;RPB=0.978969;SGB=86.8856;VDB=0.526782;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.8:26377013 chr08:026377013 0 W/26377013-26377013 FN-120 Single Base Substitution C-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN500-S.SNP.8:26378130 chr08:026378130 0 W/26378130-26378130 FN500-S Single Base Substitution C-T INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN775-S.SNP.8:26385781 chr08:026385781 0 W/26385781-26385781 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN620-S.SNP.8:26389584 chr08:026389584 0 W/26389584-26389584 FN620-S Single Base Substitution A-G INTERGENIC HOMO SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3626-S.SNP.8:26397992 chr08:026397992 0 W/26397992-26397992 FN3626-S SNP T -> C AC=1;AN=190;BQB=0.662717;DP=2881;DP4=1293,1493,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.28672e-08;MQSB=0.985608;RPB=0.693824;SGB=46.7622;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.8:26400762 chr08:026400762 0 W/26400762-26400762 FN_770-6-1 Single Base Substitution G-T HET LOC_Os08g41800 regulatory protein, putative, expressed SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_770-6-1.SNP.8:26400763 chr08:026400763 0 W/26400763-26400763 FN_770-6-1 Single Base Substitution G-A HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN3679-S.SNP.8:26401549 chr08:026401549 0 W/26401549-26401549 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.999371;DP=3058;DP4=1522,1370,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.24239e-07;MQSB=0.999629;RPB=0.977722;SGB=53.6492;VDB=0.723337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.8:26405194 chr08:026405194 0 W/26405194-26405194 FN-308 Single Base Substitution T-G INTERGENIC HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN_814-7-1.SNP.8:26411233 chr08:026411233 0 W/26411233-26411233 FN_814-7-1 Single Base Substitution T-C Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3312-S.SNP.8:26412932 chr08:026412932 0 W/26412932-26412932 FN3312-S SNP T -> C AC=1;AN=184;BQB=0.988506;DP=2976;DP4=1289,1571,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00504032;MQB=3.94271e-07;MQSB=0.769007;RPB=0.921963;SGB=63.9222;VDB=0.813332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.8:26424817 chr08:026424817 0 W/26424817-26424817 FN-184 Single Base Substitution G-A INTERGENIC HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2195-S.SNP.8:26428024 chr08:026428024 0 W/26428024-26428024 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.99558;DP=4750;DP4=2234,2273,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12429e-10;MQSB=0.965707;RPB=0.753625;SGB=80.9724;VDB=0.742575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.8:26428627 chr08:026428627 0 W/26428627-26428627 FN3673-S SNP C -> T AC=1;AN=190;BQB=0.770383;DP=3005;DP4=1377,1522,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.15163e-08;MQSB=0.927927;RPB=0.155743;SGB=46.7622;VDB=0.442372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.8:26434716 chr08:026434716 0 W/26434716-26434716 FN3282-S SNP G -> A AC=1;AN=184;BQB=0.873842;DP=2495;DP4=1099,1299,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.56048e-07;MQSB=3.85793e-05;RPB=0.495017;SGB=53.2642;VDB=0.850956;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A14|72|LOC_Os08g41860|protein_coding|CODING|LOC_Os08g41860.1|1|1) FN1405-S.SNP.8:26447007 chr08:026447007 0 W/26447007-26447007 FN1405-S Single Base Substitution C-T INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3495-S.SNP.8:26449260 chr08:026449260 0 W/26449260-26449260 FN3495-S SNP G -> C AC=1;AN=188;BQB=0.96842;DP=2581;DP4=1228,1276,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.17242e-08;MQSB=1;RPB=0.383874;SGB=48.979;VDB=0.503225;EFF=INTRON(MODIFIER||||488|LOC_Os08g41890|protein_coding|CODING|LOC_Os08g41890.1|3|1),INTRON(MODIFIER||||394|LOC_Os08g41890|protein_coding|CODING|LOC_Os08g41890.2|2|1) FN2598-S.SNP.8:26466482 chr08:026466482 0 W/26466482-26466482 FN2598-S SNP C -> T AC=2;AN=198;BQB=0.918946;DP=4254;DP4=1978,2034,28,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.54307e-29;MQSB=0.843738;RPB=1;SGB=176.764;VDB=0.907996;EFF=INTRON(MODIFIER||||313|LOC_Os08g41910|protein_coding|CODING|LOC_Os08g41910.1|6|1) FN2767-S.SNP.8:26469576 chr08:026469576 0 W/26469576-26469576 FN2767-S SNP C -> G AC=1;AN=198;BQB=0.955042;DP=4004;DP4=1407,2268,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35236e-08;MQSB=0.960581;RPB=0.913075;SGB=90.9049;VDB=0.303773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.8:26473068 chr08:026473068 0 W/26473068-26473068 FN2348 SNP T -> C AC=2;AN=192;BQB=0.996324;DP=5218;DP4=2943,1906,30,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.38668e-29;MQSB=0.931588;RPB=0.942029;SGB=118.666;VDB=0.664483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.8:26474506 chr08:026474506 0 W/26474506-26474506 FN3700-S SNP G -> A AC=1;AN=190;BQB=0.668669;DP=2664;DP4=1471,1100,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000837157;MQSB=0.992577;RPB=0.9732;SGB=35.4339;VDB=0.745205;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.8:26475343 chr08:026475343 0 W/26475343-26475343 FN3407-S SNP C -> A AC=1;AN=184;BQB=0.969911;DP=2889;DP4=1493,1320,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28984e-05;MQSB=0.938846;RPB=0.176953;SGB=25.1826;VDB=0.154586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1001-S.SNP.8:26481141 chr08:026481141 0 W/26481141-26481141 FN1001-S Single Base Substitution G-A INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN4240-S.SNP.8:26481635 chr08:026481635 0 W/26481635-26481635 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.678842;DP=4994;DP4=2995,1867,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=20;MQ0F=0.267321;MQB=0.572341;MQSB=0;RPB=0.351984;SGB=52.0913;VDB=0.964377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.8:26485961 chr08:026485961 0 W/26485961-26485961 FN2469 SNP C -> T AC=1;AN=200;BQB=0.122275;DP=2779;DP4=1242,1032,3,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0287873;MQB=0.620509;MQSB=0.013672;RPB=0.514273;SGB=31.2392;VDB=0.29154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.8:26491491 chr08:026491491 0 W/26491491-26491491 FN3426-S SNP T -> A AC=1;AN=184;BQB=0.980856;DP=2212;DP4=1044,1076,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.50108e-07;MQSB=0.945251;RPB=0.928109;SGB=25.1826;VDB=0.651538;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.8:26498729 chr08:026498729 0 W/26498729-26498729 FN-94 Single Base Substitution T-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-94.SNP.8:26502652 chr08:026502652 0 W/26502652-26502652 FN-94 Single Base Substitution A-T INTRON HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN701-S.SNP.8:26503517 chr08:026503517 0 W/26503517-26503517 FN701-S Single Base Substitution T-A INTRON HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2139-S.SNP.8:26515270 chr08:026515270 0 W/26515270-26515270 FN2139-S SNP G -> A AC=2;AN=168;BQB=0.761443;DP=1018;DP4=406,537,5,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000300098;MQSB=0.858186;RPB=0.895524;SGB=-0.101747;VDB=0.620105;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.8:26520131 chr08:026520131 0 W/26520131-26520131 FN1423-S Single Base Substitution C-G INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4073-S.SNP.8:26522333 chr08:026522333 0 W/26522333-26522333 FN4073-S SNP G -> T AC=2;AN=182;BQB=0.987107;DP=2567;DP4=1223,1240,15,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.05509e-15;MQSB=0.699922;RPB=0.0941728;SGB=102.753;VDB=0.0817388;EFF=INTRON(MODIFIER||||183|LOC_Os08g41960|protein_coding|CODING|LOC_Os08g41960.1|2|1) FN_770-6-1.SNP.8:26530100 chr08:026530100 0 W/26530100-26530100 FN_770-6-1 Single Base Substitution C-T HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_772-3-1.SNP.8:26531965 chr08:026531965 0 W/26531965-26531965 FN_772-3-1 Single Base Substitution G-A Homo LOC_Os08g41990 aminotransferase, putative, expressed SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN682-S.SNP.8:26544711 chr08:026544711 0 W/26544711-26544711 FN682-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os08g42020 zinc ion binding protein, putative, expressed SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN937-S.SNP.8:26551817 chr08:026551817 0 W/26551817-26551817 FN937-S Single Base Substitution G-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN3452-S.SNP.8:26555896 chr08:026555896 0 W/26555896-26555896 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.993269;DP=2340;DP4=800,1252,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.51533e-05;MQSB=0.390466;RPB=0.119375;SGB=-2.32838;VDB=0.0231023;EFF=INTRON(MODIFIER||||179|LOC_Os08g42040|protein_coding|CODING|LOC_Os08g42040.1|1|1),INTRON(MODIFIER||||178|LOC_Os08g42040|protein_coding|CODING|LOC_Os08g42040.2|1|1) FN1073-S.SNP.8:26559708 chr08:026559708 0 W/26559708-26559708 FN1073-S Single Base Substitution A-T INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN1073-S.SNP.8:26559709 chr08:026559709 0 W/26559709-26559709 FN1073-S Single Base Substitution G-T INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN1585-S.SNP.8:26565449 chr08:026565449 0 W/26565449-26565449 FN1585-S Single Base Substitution A-C INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-114.SNP.8:26567498 chr08:026567498 0 W/26567498-26567498 FN-114 Single Base Substitution T-A INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN1563-S.SNP.8:26568155 chr08:026568155 0 W/26568155-26568155 FN1563-S Single Base Substitution T-C INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3465-S.SNP.8:26570232 chr08:026570232 0 W/26570232-26570232 FN3465-S SNP C -> A AC=1;AN=184;BQB=0.974022;DP=2605;DP4=1265,1257,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42954e-08;MQSB=0.906107;RPB=0.981071;SGB=62.3078;VDB=0.903899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.8:26572554 chr08:026572554 0 W/26572554-26572554 FN2790-S SNP C -> A AC=1;AN=198;BQB=0.993327;DP=4659;DP4=2265,2174,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.52576e-07;MQSB=0.715755;RPB=0.999968;SGB=40.3588;VDB=0.869737;EFF=INTRON(MODIFIER||||468|LOC_Os08g42080|protein_coding|CODING|LOC_Os08g42080.1|1|1) FN-147.SNP.8:26578771 chr08:026578771 0 W/26578771-26578771 FN-147 Single Base Substitution C-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN4125-S.SNP.8:26580090 chr08:026580090 0 W/26580090-26580090 FN4125-S SNP C -> G AC=1;AN=182;BQB=0.957943;DP=2943;DP4=1380,1474,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14908e-07;MQSB=0.0142885;RPB=0.998523;SGB=62.1548;VDB=0.202262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.8:26581080 chr08:026581080 0 W/26581080-26581080 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.886728;DP=6735;DP4=3183,3192,17,22;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.218114;MQB=0.00775659;MQSB=0;RPB=0.219207;SGB=130.399;VDB=0.100298;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.8:26589403 chr08:026589403 0 W/26589403-26589403 FN_N1-116-1 Single Base Substitution G-A HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN354-S.SNP.8:26591309 chr08:026591309 0 W/26591309-26591309 FN354-S Single Base Substitution C-T INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN2470.SNP.8:26592707 chr08:026592707 0 W/26592707-26592707 FN2470 SNP A -> T AC=1;AN=200;BQB=0.945362;DP=4559;DP4=1946,2273,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219346;MQB=9.27952e-08;MQSB=0.455335;RPB=0.549751;SGB=54.2646;VDB=0.425465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.8:26596098 chr08:026596098 0 W/26596098-26596098 FN2678-S SNP T -> A AC=1;AN=200;BQB=0.998839;DP=5135;DP4=2516,2297,6,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00107686;MQSB=0.234636;RPB=0.942867;SGB=3.06925;VDB=0.262455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.8:26596168 chr08:026596168 0 W/26596168-26596168 FN2321 SNP G -> A AC=1;AN=192;BQB=0.942096;DP=5027;DP4=2714,2027,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=6.20113e-10;MQSB=0.000655556;RPB=0.455676;SGB=-8.56084;VDB=0.906361;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.8:26597028 chr08:026597028 0 W/26597028-26597028 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.518779;DP=2548;DP4=1354,1109,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.21266e-11;MQSB=0.969025;RPB=0.197841;SGB=62.4192;VDB=0.777573;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.8:26600152 chr08:026600152 0 W/26600152-26600152 FN1065-S Single Base Substitution G-A INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2428.SNP.8:26600152 chr08:026600152 0 W/26600152-26600152 FN2428 SNP G -> A AC=1;AN=200;BQB=0.378631;DP=4908;DP4=2311,2259,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.45287e-15;MQSB=0.972369;RPB=0.984203;SGB=-9.47921;VDB=0.304345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.8:26600877 chr08:026600877 0 W/26600877-26600877 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.933176;DP=2689;DP4=1209,1331,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41144e-08;MQSB=0.99572;RPB=0.942829;SGB=23.6597;VDB=0.352948;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.8:26602117 chr08:026602117 0 W/26602117-26602117 FN1022-S Single Base Substitution T-C INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN_N1-150-1.SNP.8:26603842 chr08:026603842 0 W/26603842-26603842 FN_N1-150-1 Single Base Substitution T-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3659-S.SNP.8:26612928 chr08:026612928 0 W/26612928-26612928 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.995271;DP=2609;DP4=1184,1302,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.0739747;MQB=0.194666;MQSB=3.5369e-29;RPB=0.903454;SGB=43.2083;VDB=0.0965086;EFF=INTERGENIC(MODIFIER||||||||||1) FN-51.SNP.8:26614125 chr08:026614125 0 W/26614125-26614125 FN-51 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g42120 transposon protein, putative, unclassified, expressed SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.8:26614125 chr08:026614125 0 W/26614125-26614125 FN-51 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g42120 transposon protein, putative, unclassified, expressed SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3419-S.SNP.8:26628734 chr08:026628734 0 W/26628734-26628734 FN3419-S SNP C -> T AC=1;AN=184;BQB=0.874921;DP=3048;DP4=1425,1552,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.96076e-10;MQSB=0.877135;RPB=0.850555;SGB=107.526;VDB=0.831709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1092M|1914|LOC_Os08g42140|protein_coding|CODING|LOC_Os08g42140.1|2|1) FN3944-S.SNP.8:26629104 chr08:026629104 0 W/26629104-26629104 FN3944-S SNP G -> T AC=1;AN=168;BQB=0.838071;DP=2504;DP4=1278,1135,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.115415;MQB=0.990643;MQSB=0.0605153;RPB=0.998726;SGB=19.7539;VDB=0.830975;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P968|1914|LOC_Os08g42140|protein_coding|CODING|LOC_Os08g42140.1|2|1) FN1421-S.SNP.8:26630317 chr08:026630317 0 W/26630317-26630317 FN1421-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g42140 retrotransposon protein, putative, unclassified, expressed SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3946-S.SNP.8:26633126 chr08:026633126 0 W/26633126-26633126 FN3946-S SNP G -> A AC=2;AN=168;BQB=0.796618;DP=2215;DP4=819,1304,7,25;HOB=0.0235261;ICB=0.494119;MQ=29;MQ0F=0.173363;MQB=0.595193;MQSB=0.978949;RPB=0.893257;SGB=136.358;VDB=0.105821;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.8:26633750 chr08:026633750 0 W/26633750-26633750 FN1319-S Single Base Substitution A-G INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. W463-2-1.SNP.8:26636302 chr08:026636302 0 W/26636302-26636302 W463-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3316-S.SNP.8:26639977 chr08:026639977 0 W/26639977-26639977 FN3316-S SNP A -> G AC=1;AN=184;BQB=0.975631;DP=2820;DP4=1446,1251,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.30293e-05;MQSB=0.936703;RPB=0.433444;SGB=39.699;VDB=0.105532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.8:26648629 chr08:026648629 0 W/26648629-26648629 FN3772-S SNP T -> C AC=1;AN=190;BQB=0.549731;DP=2335;DP4=1089,1049,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000428266;MQB=2.29333e-06;MQSB=0.176441;RPB=0.961396;SGB=44.5415;VDB=0.297961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.8:26651055 chr08:026651055 0 W/26651055-26651055 FN2499 SNP T -> A AC=1;AN=200;BQB=0.955621;DP=4771;DP4=2226,2189,4,11;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0876127;MQB=0.794196;MQSB=0;RPB=0.94894;SGB=24.2746;VDB=0.305467;EFF=INTERGENIC(MODIFIER||||||||||1) FN-12.SNP.8:26711104 chr08:026711104 0 W/26711104-26711104 FN-12 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os08g42310 expressed protein SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN3924-S.SNP.8:26712635 chr08:026712635 0 W/26712635-26712635 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.997683;DP=2363;DP4=972,1259,10,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.50427e-14;MQSB=0.977392;RPB=0.888838;SGB=13.0417;VDB=0.454613;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.8:26727698 chr08:026727698 0 W/26727698-26727698 FN3537-S SNP T -> G AC=1;AN=188;BQB=0.969117;DP=2889;DP4=1598,1194,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45607e-07;MQSB=0.972633;RPB=0.989911;SGB=44.4357;VDB=0.987054;EFF=INTRON(MODIFIER||||307|LOC_Os08g42350|protein_coding|CODING|LOC_Os08g42350.1|1|1) FN3537-S.SNP.8:26727704 chr08:026727704 0 W/26727704-26727704 FN3537-S SNP A -> T AC=1;AN=188;BQB=0.930013;DP=2869;DP4=1579,1206,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.54168e-09;MQSB=0.90262;RPB=0.740418;SGB=35.9843;VDB=0.968252;EFF=INTRON(MODIFIER||||307|LOC_Os08g42350|protein_coding|CODING|LOC_Os08g42350.1|1|1) FN2538-S.SNP.8:26737977 chr08:026737977 0 W/26737977-26737977 FN2538-S SNP A -> G AC=1;AN=198;BQB=0.741442;DP=4328;DP4=1976,2125,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.08651e-07;MQSB=0.940812;RPB=0.999141;SGB=43.7442;VDB=0.728756;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.8:26738259 chr08:026738259 0 W/26738259-26738259 FN530-S Single Base Substitution A-C INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN2110-S.SNP.8:26738753 chr08:026738753 0 W/26738753-26738753 FN2110-S SNP G -> A AC=1;AN=168;BQB=0.310757;DP=4127;DP4=1995,2076,13,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.52205e-14;MQSB=0.957208;RPB=0.953457;SGB=-46.3351;VDB=0.036992;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.8:26740899 chr08:026740899 0 W/26740899-26740899 FN457-S Single Base Substitution T-A INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3331-S.SNP.8:26741800 chr08:026741800 0 W/26741800-26741800 FN3331-S SNP A -> T AC=2;AN=184;BQB=0.989549;DP=2435;DP4=1243,1101,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.08271e-15;MQSB=0.995247;RPB=0.256968;SGB=112.047;VDB=0.464633;EFF=INTRON(MODIFIER||||92|LOC_Os08g42360|protein_coding|CODING|LOC_Os08g42360.1|1|1) FN783-S.SNP.8:26745305 chr08:026745305 0 W/26745305-26745305 FN783-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g42370 zinc finger DHHC domain-containing protein, putative, expressed SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN1153-S.SNP.8:26759242 chr08:026759242 0 W/26759242-26759242 FN1153-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN2592-S.SNP.8:26773478 chr08:026773478 0 W/26773478-26773478 FN2592-S SNP G -> A AC=1;AN=198;BQB=0.495334;DP=4136;DP4=2153,1562,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000483559;MQB=1.08777e-06;MQSB=0.234822;RPB=0.248939;SGB=76.1002;VDB=0.24107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.8:26776776 chr08:026776776 0 W/26776776-26776776 FN2701-S SNP A -> T AC=1;AN=200;BQB=0.920377;DP=4595;DP4=1889,2533,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.54477e-08;MQSB=0.700114;RPB=0.959464;SGB=33.0593;VDB=0.217648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.8:26776968 chr08:026776968 0 W/26776968-26776968 FN1707-S SNP A -> G AC=1;AN=188;BQB=0.489561;DP=1720;DP4=869,790,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00174419;MQB=1.41716e-05;MQSB=0.128092;RPB=0.0584957;SGB=-36.9078;VDB=0.346082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.8:26784802 chr08:026784802 0 W/26784802-26784802 FN1263-S Single Base Substitution A-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1129-S.SNP.8:26790605 chr08:026790605 0 W/26790605-26790605 FN1129-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2795-S.SNP.8:26792846 chr08:026792846 0 W/26792846-26792846 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.127423;DP=4488;DP4=1893,2295,17,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00767e-11;MQSB=0.940999;RPB=0.836037;SGB=-114.679;VDB=0.195061;EFF=UTR_3_PRIME(MODIFIER||407||488|LOC_Os08g42440|protein_coding|CODING|LOC_Os08g42440.1|4|1) FN2374.SNP.8:26813939 chr08:026813939 0 W/26813939-26813939 FN2374 SNP A -> T AC=2;AN=192;BQB=0.914625;DP=4700;DP4=2410,2039,19,18;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=4.79101e-16;MQSB=0.410898;RPB=0.964232;SGB=80.2009;VDB=0.191797;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.8:26815958 chr08:026815958 0 W/26815958-26815958 FN-136 Single Base Substitution A-T INTERGENIC HOMO SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2424.SNP.8:26824906 chr08:026824906 0 W/26824906-26824906 FN2424 SNP T -> C AC=1;AN=200;BQB=0.998075;DP=4514;DP4=1911,2297,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32793e-05;MQSB=1.07794e-07;RPB=0.561406;SGB=35.8441;VDB=0.0527636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.8:26830392 chr08:026830392 0 W/26830392-26830392 FN3368-S SNP A -> T AC=1;AN=184;BQB=0.870206;DP=2654;DP4=1281,1159,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30399e-07;MQSB=0.998963;RPB=0.679959;SGB=0.715177;VDB=0.0393765;EFF=INTRON(MODIFIER||||102|LOC_Os08g42460|protein_coding|CODING|LOC_Os08g42460.1|1|1) FN3368-S.SNP.8:26830393 chr08:026830393 0 W/26830393-26830393 FN3368-S SNP T -> A AC=1;AN=184;BQB=0.935365;DP=2668;DP4=1311,1203,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.00092e-06;MQSB=0.961974;RPB=0.986587;SGB=28.7043;VDB=0.11747;EFF=INTRON(MODIFIER||||102|LOC_Os08g42460|protein_coding|CODING|LOC_Os08g42460.1|1|1) FN3316-S.SNP.8:26836157 chr08:026836157 0 W/26836157-26836157 FN3316-S SNP A -> C AC=1;AN=184;BQB=0.464291;DP=3233;DP4=1449,1525,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21496e-07;MQSB=0.932425;RPB=0.240433;SGB=-38.1432;VDB=0.550435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.8:26837187 chr08:026837187 0 W/26837187-26837187 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.163463;DP=1841;DP4=770,968,26,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.56756e-15;MQSB=0.631001;RPB=0.999408;SGB=155.234;VDB=0.568372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.8:26842260 chr08:026842260 0 W/26842260-26842260 FN2452 SNP T -> G AC=1;AN=200;BQB=0.733442;DP=4782;DP4=2247,2147,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.46558e-11;MQSB=0.981029;RPB=0.132655;SGB=51.0851;VDB=0.0543508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K165Q|291|LOC_Os08g42470|protein_coding|CODING|LOC_Os08g42470.1|4|1) FN2618-S.SNP.8:26844368 chr08:026844368 0 W/26844368-26844368 FN2618-S SNP C -> T AC=1;AN=198;BQB=0.725338;DP=4204;DP4=1991,1986,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.35004e-08;MQSB=0.891754;RPB=0.778852;SGB=43.7442;VDB=0.100236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.8:26844431 chr08:026844431 0 W/26844431-26844431 FN2175-S SNP C -> T AC=1;AN=168;BQB=0.13453;DP=3818;DP4=1777,1993,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.81519e-10;MQSB=0.983041;RPB=0.737572;SGB=-108.339;VDB=0.773424;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.8:26853921 chr08:026853921 0 W/26853921-26853921 FN806-S Single Base Substitution C-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN486-S.SNP.8:26853943 chr08:026853943 0 W/26853943-26853943 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1251-S.SNP.8:26856065 chr08:026856065 0 W/26856065-26856065 FN1251-S Single Base Substitution C-T INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. 701-3.SNP.8:26859204 chr08:026859204 0 W/26859204-26859204 701-3 Single Base Substitution A-T INTERGENIC HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.8:26859204 chr08:026859204 0 W/26859204-26859204 701-3 Single Base Substitution A-T INTERGENIC Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN3845-S.SNP.8:26873964 chr08:026873964 0 W/26873964-26873964 FN3845-S SNP C -> T AC=2;AN=190;BQB=0.971048;DP=2447;DP4=1256,1095,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.5729e-16;MQSB=0.847335;RPB=0.75109;SGB=96.5165;VDB=0.546833;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S586|831|LOC_Os08g42530|protein_coding|CODING|LOC_Os08g42530.1|16|1) FN1421-S.SNP.8:26886163 chr08:026886163 0 W/26886163-26886163 FN1421-S Single Base Substitution A-G INTRON HOMO SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3763-S.SNP.8:26891164 chr08:026891164 0 W/26891164-26891164 FN3763-S SNP A -> G AC=1;AN=190;BQB=0.879604;DP=2593;DP4=1266,1249,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000197392;MQSB=0.993437;RPB=0.8643;SGB=18.3316;VDB=0.637583;EFF=UTR_3_PRIME(MODIFIER||128||453|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.2|6|1),UTR_3_PRIME(MODIFIER||128||453|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.3|6|1),UTR_3_PRIME(MODIFIER||128||453|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.4|6|1),UTR_3_PRIME(MODIFIER||128||453|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.5|6|1),UTR_3_PRIME(MODIFIER||128||453|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.6|6|1),INTRON(MODIFIER||||541|LOC_Os08g42550|protein_coding|CODING|LOC_Os08g42550.1|6|1) FN555-S.SNP.8:26899678 chr08:026899678 0 W/26899678-26899678 FN555-S Single Base Substitution A-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. W7-1-1.SNP.8:26899678 chr08:026899678 0 W/26899678-26899678 W7-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3902-S.SNP.8:26903809 chr08:026903809 0 W/26903809-26903809 FN3902-S SNP A -> T AC=1;AN=158;BQB=0.908294;DP=2693;DP4=1210,1367,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.15483e-09;MQSB=0.874614;RPB=0.9051;SGB=47.5512;VDB=0.5012;EFF=INTRON(MODIFIER||||740|LOC_Os08g42560|protein_coding|CODING|LOC_Os08g42560.1|8|1) FN3795-S.SNP.8:26903814 chr08:026903814 0 W/26903814-26903814 FN3795-S SNP T -> C AC=1;AN=190;BQB=0.8563;DP=2860;DP4=1255,1470,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.70593e-07;MQSB=0.911429;RPB=0.994428;SGB=58.2031;VDB=0.460669;EFF=INTRON(MODIFIER||||740|LOC_Os08g42560|protein_coding|CODING|LOC_Os08g42560.1|8|1) FN3480-S.SNP.8:26913251 chr08:026913251 0 W/26913251-26913251 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.999104;DP=2776;DP4=1249,1473,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.28778e-09;MQSB=0.98717;RPB=0.958498;SGB=66.8296;VDB=0.151375;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E386K|397|LOC_Os08g42580|protein_coding|CODING|LOC_Os08g42580.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E327K|338|LOC_Os08g42580|protein_coding|CODING|LOC_Os08g42580.4|11|1) FN4204-S.SNP.8:26914131 chr08:026914131 0 W/26914131-26914131 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.836421;DP=2696;DP4=1542,1047,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.48543e-05;MQSB=0.993263;RPB=0.526071;SGB=12.556;VDB=0.980844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.8:26919970 chr08:026919970 0 W/26919970-26919970 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.915344;DP=3088;DP4=1510,1487,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.02816e-06;MQSB=0.998886;RPB=0.986727;SGB=35.1773;VDB=0.624481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P157S|424|LOC_Os08g42590|protein_coding|CODING|LOC_Os08g42590.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P157S|424|LOC_Os08g42590|protein_coding|CODING|LOC_Os08g42590.1|2|1) FN1353-S.SNP.8:26920264 chr08:026920264 0 W/26920264-26920264 FN1353-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g42590 mtN19, putative, expressed SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1657-S.SNP.8:26937449 chr08:026937449 0 W/26937449-26937449 FN1657-S Single Base Substitution C-T INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN-393.SNP.8:26937610 chr08:026937610 0 W/26937610-26937610 FN-393 Single Base Substitution C-T INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-393.SNP.8:26937611 chr08:026937611 0 W/26937611-26937611 FN-393 Single Base Substitution T-A INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN-393.SNP.8:26937612 chr08:026937612 0 W/26937612-26937612 FN-393 Single Base Substitution G-A INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN734-S.SNP.8:26945705 chr08:026945705 0 W/26945705-26945705 FN734-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN734-S.SNP.8:26945707 chr08:026945707 0 W/26945707-26945707 FN734-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN2129-S.SNP.8:26954977 chr08:026954977 0 W/26954977-26954977 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.999955;DP=3058;DP4=1273,1752,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.08889e-11;MQSB=0.00010292;RPB=0.0900023;SGB=65.6253;VDB=0.180757;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.8:26956450 chr08:026956450 0 W/26956450-26956450 FN-161 Single Base Substitution C-T INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN438-S.SNP.8:26960215 chr08:026960215 0 W/26960215-26960215 FN438-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os08g42650 retrotransposon protein, putative, unclassified, expressed SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2261-S.SNP.8:26965948 chr08:026965948 0 W/26965948-26965948 FN2261-S SNP G -> A AC=2;AN=190;BQB=0.0862048;DP=4036;DP4=1958,1744,59,32;HOB=0.020831;ICB=0.494793;MQ=25;MQ0F=0.173935;MQB=0.267585;MQSB=0;RPB=0.977807;SGB=303.219;VDB=0.510635;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L60|1015|LOC_Os08g42660|protein_coding|CODING|LOC_Os08g42660.1|1|1) FN1493-S.SNP.8:26971936 chr08:026971936 0 W/26971936-26971936 FN1493-S Single Base Substitution G-A INTRON HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3363-S.SNP.8:26979584 chr08:026979584 0 W/26979584-26979584 FN3363-S SNP C -> T AC=1;AN=184;BQB=0.578678;DP=2852;DP4=1400,1301,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.2104e-11;MQSB=0.875946;RPB=0.813999;SGB=56.8786;VDB=0.836992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.8:26979753 chr08:026979753 0 W/26979753-26979753 FN2108-S SNP G -> C AC=2;AN=168;BQB=0.251733;DP=3646;DP4=1704,1870,14,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.98718e-20;MQSB=0.919488;RPB=0.995699;SGB=-96.3134;VDB=0.456528;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.8:26981312 chr08:026981312 0 W/26981312-26981312 FN-124 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g42680 expressed protein SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2735-S.SNP.8:26986863 chr08:026986863 0 W/26986863-26986863 FN2735-S SNP A -> C AC=1;AN=200;BQB=0.872889;DP=4714;DP4=2348,2118,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94321e-11;MQSB=0.912481;RPB=0.685099;SGB=-38.4742;VDB=0.862663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.8:26987539 chr08:026987539 0 W/26987539-26987539 FN2771-S SNP G -> A AC=2;AN=198;BQB=0.999788;DP=4402;DP4=2018,1924,33,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000227169;MQB=9.06732e-23;MQSB=0.0362037;RPB=0.50995;SGB=57.203;VDB=0.928878;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.8:26987926 chr08:026987926 0 W/26987926-26987926 FN1287-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2327.SNP.8:26991811 chr08:026991811 0 W/26991811-26991811 FN2327 SNP C -> T AC=1;AN=192;BQB=0.80762;DP=4353;DP4=1977,2143,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.96155e-06;MQSB=0.719406;RPB=0.982113;SGB=49.2105;VDB=0.614492;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S504|1226|LOC_Os08g42700|protein_coding|CODING|LOC_Os08g42700.1|2|1) FN525-S.SNP.8:27000297 chr08:027000297 0 W/27000297-27000297 FN525-S Single Base Substitution A-T INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2594-S.SNP.8:27001896 chr08:027001896 0 W/27001896-27001896 FN2594-S SNP C -> T AC=1;AN=198;BQB=0.0440414;DP=4172;DP4=2059,1900,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.05834e-08;MQSB=0.264069;RPB=0.643993;SGB=-88.2255;VDB=0.379887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.8:27011741 chr08:027011741 0 W/27011741-27011741 FN1755-S SNP G -> T AC=1;AN=188;BQB=0.617691;DP=2723;DP4=1331,1351,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00146897;MQB=1.41076e-09;MQSB=0.444784;RPB=0.997258;SGB=10.1681;VDB=0.871088;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.8:27018798 chr08:027018798 0 W/27018798-27018798 FN957-S Single Base Substitution C-T INTRON HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1492-S.SNP.8:27022053 chr08:027022053 0 W/27022053-27022053 FN1492-S Single Base Substitution T-C INTRON Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1014-S.SNP.8:27024585 chr08:027024585 0 W/27024585-27024585 FN1014-S Single Base Substitution A-T INTRON HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1014-S.SNP.8:27024586 chr08:027024586 0 W/27024586-27024586 FN1014-S Single Base Substitution A-G INTRON HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2408.SNP.8:27033628 chr08:027033628 0 W/27033628-27033628 FN2408 SNP T -> C AC=2;AN=200;BQB=0.480883;DP=4374;DP4=1888,1903,20,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.6599e-19;MQSB=0.516511;RPB=0.968366;SGB=-44.0018;VDB=0.728803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.8:27033628 chr08:027033628 0 W/27033628-27033628 FN3796-S SNP T -> C AC=2;AN=190;BQB=0.892847;DP=2981;DP4=1219,1603,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.8556e-13;MQSB=0.938179;RPB=0.999986;SGB=99.1879;VDB=0.925061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.8:27035737 chr08:027035737 0 W/27035737-27035737 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.996331;DP=4552;DP4=2255,1865,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83232e-12;MQSB=0.97302;RPB=0.216684;SGB=45.1159;VDB=0.0669879;EFF=INTRON(MODIFIER||||381|LOC_Os08g42730|protein_coding|CODING|LOC_Os08g42730.1|1|1) FN2697-S.SNP.8:27037678 chr08:027037678 0 W/27037678-27037678 FN2697-S SNP T -> A AC=1;AN=200;BQB=0.503823;DP=4926;DP4=2275,2424,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93244e-20;MQSB=0.961944;RPB=0.826284;SGB=105.163;VDB=0.406803;EFF=INTRON(MODIFIER||||381|LOC_Os08g42730|protein_coding|CODING|LOC_Os08g42730.1|4|1) FN-147.SNP.8:27039665 chr08:027039665 0 W/27039665-27039665 FN-147 Single Base Substitution C-A INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2305.SNP.8:27043116 chr08:027043116 0 W/27043116-27043116 FN2305 SNP A -> G AC=1;AN=192;BQB=0.987556;DP=3792;DP4=1022,1716,7,16;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=2.65953e-06;MQSB=0.000517298;RPB=0.977044;SGB=-10.8182;VDB=0.867641;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.8:27055179 chr08:027055179 0 W/27055179-27055179 FN496-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1031-S.SNP.8:27061567 chr08:027061567 0 W/27061567-27061567 FN1031-S Single Base Substitution T-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1548-S.SNP.8:27063218 chr08:027063218 0 W/27063218-27063218 FN1548-S SNP G -> A AC=1;AN=188;BQB=0.87764;DP=3338;DP4=1846,1461,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.47661e-09;MQSB=0.998716;RPB=0.992635;SGB=46.6141;VDB=0.206779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.8:27071869 chr08:027071869 0 W/27071869-27071869 FN3970-S SNP G -> T AC=2;AN=168;BQB=0.687139;DP=2627;DP4=1368,1093,7,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.39311e-11;MQSB=0.584374;RPB=0.853187;SGB=83.1885;VDB=0.647869;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.8:27074923 chr08:027074923 0 W/27074923-27074923 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN1541-S.SNP.8:27075645 chr08:027075645 0 W/27075645-27075645 FN1541-S Single Base Substitution G-A INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN3293-S.SNP.8:27075840 chr08:027075840 0 W/27075840-27075840 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.994516;DP=2987;DP4=1316,1581,11,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.0666e-14;MQSB=0.947888;RPB=0.214713;SGB=74.4875;VDB=0.017633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3888-S.SNP.8:27081703 chr08:027081703 0 W/27081703-27081703 FN3888-S SNP C -> T AC=1;AN=158;BQB=0.998745;DP=2697;DP4=1410,1200,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=32;MQ0F=0.0485725;MQB=0.687382;MQSB=1.06291e-11;RPB=0.997973;SGB=51.4366;VDB=0.747745;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q748|958|LOC_Os08g42830|protein_coding|CODING|LOC_Os08g42830.1|8|1) FN3438-S.SNP.8:27084104 chr08:027084104 0 W/27084104-27084104 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.999175;DP=3007;DP4=1864,1091,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.406385;MQB=0.322651;MQSB=0.43545;RPB=0.241626;SGB=66.8296;VDB=0.111079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E160K|958|LOC_Os08g42830|protein_coding|CODING|LOC_Os08g42830.1|1|1) FN3712-S.SNP.8:27084387 chr08:027084387 0 W/27084387-27084387 FN3712-S SNP G -> A AC=2;AN=190;BQB=0.901546;DP=2536;DP4=1374,1055,13,11;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0189274;MQB=4.78232e-05;MQSB=0.156448;RPB=0.991803;SGB=103.742;VDB=0.116179;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I65|958|LOC_Os08g42830|protein_coding|CODING|LOC_Os08g42830.1|1|1) FN2742-S.SNP.8:27096432 chr08:027096432 0 W/27096432-27096432 FN2742-S SNP C -> T AC=1;AN=200;BQB=0.990517;DP=4813;DP4=2382,2174,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000623312;MQB=7.25034e-10;MQSB=0.746223;RPB=0.883611;SGB=91.1059;VDB=0.781679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1554-M.SNP.8:27097956 chr08:027097956 0 W/27097956-27097956 FN1554-M SNP A -> G AC=1;AN=190;BQB=0.811722;DP=4713;DP4=2233,1933,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00148525;MQB=0.00139331;MQSB=7.71742e-05;RPB=0.0317504;SGB=108.296;VDB=0.0339227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.8:27102891 chr08:027102891 0 W/27102891-27102891 FN1731-S SNP C -> T AC=1;AN=188;BQB=0.164001;DP=3387;DP4=2161,1192,18,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.2026e-07;MQSB=0.833529;RPB=0.291547;SGB=-88.8972;VDB=0.688488;EFF=INTERGENIC(MODIFIER||||||||||1) FN415-S.SNP.8:27105214 chr08:027105214 0 W/27105214-27105214 FN415-S Single Base Substitution G-A INTRON HET SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN2651-S.SNP.8:27105686 chr08:027105686 0 W/27105686-27105686 FN2651-S SNP C -> T AC=2;AN=200;BQB=0.997597;DP=5020;DP4=2587,2139,25,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17887e-26;MQSB=0.998447;RPB=0.630484;SGB=166.451;VDB=0.855367;EFF=INTRON(MODIFIER||||733|LOC_Os08g42870|protein_coding|CODING|LOC_Os08g42870.1|4|1) FN552-S.SNP.8:27108401 chr08:027108401 0 W/27108401-27108401 FN552-S Single Base Substitution A-G INTRON HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN1583-S.SNP.8:27116643 chr08:027116643 0 W/27116643-27116643 FN1583-S Single Base Substitution T-A INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2630-S.SNP.8:27117784 chr08:027117784 0 W/27117784-27117784 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.881091;DP=4803;DP4=2276,2207,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78458e-13;MQSB=0.970121;RPB=0.794992;SGB=19.1209;VDB=0.871694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.8:27122837 chr08:027122837 0 W/27122837-27122837 FN2210-S SNP G -> T AC=2;AN=190;BQB=0.728095;DP=3823;DP4=2198,1342,19,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.37645e-17;MQSB=0.948749;RPB=0.983082;SGB=96.5165;VDB=0.895273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.8:27128619 chr08:027128619 0 W/27128619-27128619 FN2318 SNP G -> A AC=1;AN=192;BQB=0.998884;DP=5186;DP4=2554,2335,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7162e-18;MQSB=0.789623;RPB=0.459925;SGB=30.82;VDB=0.991561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E176K|248|LOC_Os08g42920|protein_coding|CODING|LOC_Os08g42920.1|3|1) FN2547-S.SNP.8:27156031 chr08:027156031 0 W/27156031-27156031 FN2547-S SNP G -> T AC=1;AN=198;BQB=0.8722;DP=4166;DP4=1980,1931,3,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00024008;MQSB=0.996831;RPB=0.312632;SGB=21.981;VDB=0.036809;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.8:27181345 chr08:027181345 0 W/27181345-27181345 FN1322-S Single Base Substitution T-A INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN4139-S.SNP.8:27182221 chr08:027182221 0 W/27182221-27182221 FN4139-S SNP A -> T AC=2;AN=170;BQB=0.938225;DP=2687;DP4=1235,1373,16,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.29232e-16;MQSB=0.934508;RPB=0.875246;SGB=110.069;VDB=0.0197971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D1009E|1184|LOC_Os08g43010|protein_coding|CODING|LOC_Os08g43010.1|1|1) FN2708-S.SNP.8:27187672 chr08:027187672 0 W/27187672-27187672 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.779533;DP=4826;DP4=2333,2243,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08359e-11;MQSB=0.848552;RPB=0.999044;SGB=86.5007;VDB=0.463435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.8:27195245 chr08:027195245 0 W/27195245-27195245 FN3523-S SNP C -> A AC=1;AN=188;BQB=0.999523;DP=2979;DP4=1521,1336,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02587e-08;MQSB=0.940535;RPB=0.658408;SGB=62.6088;VDB=0.928093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.8:27203616 chr08:027203616 0 W/27203616-27203616 FN3316-S SNP T -> C AC=1;AN=184;BQB=0.990297;DP=2715;DP4=1151,1459,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000368324;MQB=2.47608e-11;MQSB=0.730931;RPB=0.805429;SGB=53.3568;VDB=0.166927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I105T|442|LOC_Os08g43040|protein_coding|CODING|LOC_Os08g43040.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I105T|442|LOC_Os08g43040|protein_coding|CODING|LOC_Os08g43040.1|2|1) FN584-S.SNP.8:27211341 chr08:027211341 0 W/27211341-27211341 FN584-S Single Base Substitution T-G INTRON HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN835-S.SNP.8:27212142 chr08:027212142 0 W/27212142-27212142 FN835-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g43060 expressed protein SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1456-S.SNP.8:27218070 chr08:027218070 0 W/27218070-27218070 FN1456-S Single Base Substitution G-A INTERGENIC Homo SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN4325-S.SNP.8:27220587 chr08:027220587 0 W/27220587-27220587 FN4325-S SNP C -> A AC=1;AN=170;BQB=0.493911;DP=2414;DP4=1258,1072,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000379457;MQSB=0.982635;RPB=0.999709;SGB=27.9928;VDB=0.817242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.8:27222376 chr08:027222376 0 W/27222376-27222376 FN3808-S SNP A -> G AC=1;AN=190;BQB=0.946381;DP=2327;DP4=1135,1121,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45904e-07;MQSB=0.994584;RPB=0.95107;SGB=44.5415;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.8:27225894 chr08:027225894 0 W/27225894-27225894 FN2734-S SNP T -> C AC=2;AN=200;BQB=0.296932;DP=5222;DP4=2789,2228,26,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.77428e-26;MQSB=0.988172;RPB=0.975712;SGB=224.656;VDB=0.90445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.8:27239057 chr08:027239057 0 W/27239057-27239057 FN2688-S SNP A -> T AC=1;AN=200;BQB=0.538253;DP=4542;DP4=2102,2272,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46156e-06;MQSB=0.994551;RPB=0.948151;SGB=35.8441;VDB=0.772611;EFF=INTRON(MODIFIER||||464|LOC_Os08g43090|protein_coding|CODING|LOC_Os08g43090.1|3|1) FN267-S.SNP.8:27255417 chr08:027255417 0 W/27255417-27255417 FN267-S Single Base Substitution C-T INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN267-S.SNP.8:27255418 chr08:027255418 0 W/27255418-27255418 FN267-S Single Base Substitution G-T INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN589-S.SNP.8:27259393 chr08:027259393 0 W/27259393-27259393 FN589-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g43110 retrotransposon protein, putative, unclassified, expressed SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN589-S.SNP.8:27259394 chr08:027259394 0 W/27259394-27259394 FN589-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g43110 retrotransposon protein, putative, unclassified, expressed SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. W7-1-1.SNP.8:27265474 chr08:027265474 0 W/27265474-27265474 W7-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN-265.SNP.8:27291715 chr08:027291715 0 W/27291715-27291715 FN-265 Single Base Substitution C-T INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1531-S.SNP.8:27300988 chr08:027300988 0 W/27300988-27300988 FN1531-S Single Base Substitution T-A INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN4203-S.SNP.8:27312178 chr08:027312178 0 W/27312178-27312178 FN4203-S SNP T -> C AC=1;AN=170;BQB=0.585258;DP=2793;DP4=1359,1384,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.53505e-11;MQSB=0.962104;RPB=0.98258;SGB=11.5457;VDB=0.425731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.8:27314894 chr08:027314894 0 W/27314894-27314894 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.729089;DP=3628;DP4=1263,1963,10,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.34669e-07;MQSB=8.98046e-10;RPB=0.969517;SGB=91.1059;VDB=0.783038;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.8:27316498 chr08:027316498 0 W/27316498-27316498 FN464-S Single Base Substitution T-C INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN3659-S.SNP.8:27316599 chr08:027316599 0 W/27316599-27316599 FN3659-S SNP A -> G AC=1;AN=190;BQB=0.935367;DP=3203;DP4=1524,1474,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9704e-10;MQSB=0.91866;RPB=0.961511;SGB=53.8699;VDB=0.25165;EFF=INTRON(MODIFIER||||394|LOC_Os08g43190|protein_coding|CODING|LOC_Os08g43190.1|1|1),INTRON(MODIFIER||||369|LOC_Os08g43190|protein_coding|CODING|LOC_Os08g43190.2|1|1) FN323-S.SNP.8:27322712 chr08:027322712 0 W/27322712-27322712 FN323-S Single Base Substitution A-C INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. W246-5-1.SNP.8:27323581 chr08:027323581 0 W/27323581-27323581 W246-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.8:27323582 chr08:027323582 0 W/27323582-27323582 W246-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.8:27323583 chr08:027323583 0 W/27323583-27323583 W246-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3838-S.SNP.8:27330659 chr08:027330659 0 W/27330659-27330659 FN3838-S SNP G -> C AC=1;AN=190;BQB=0.643832;DP=2653;DP4=1161,1402,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.29371e-05;MQSB=0.870211;RPB=0.47491;SGB=35.4339;VDB=0.42038;EFF=INTRON(MODIFIER||||239|LOC_Os08g43230|protein_coding|CODING|LOC_Os08g43230.1|5|1) FN2485.SNP.8:27341583 chr08:027341583 0 W/27341583-27341583 FN2485 SNP A -> T AC=1;AN=200;BQB=0.740627;DP=4599;DP4=2271,2046,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.51209e-09;MQSB=0.992481;RPB=0.974798;SGB=47.4799;VDB=0.122634;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.8:27342496 chr08:027342496 0 W/27342496-27342496 FN-344 Single Base Substitution A-G INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN728-S.SNP.8:27345491 chr08:027345491 0 W/27345491-27345491 FN728-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN778-S.SNP.8:27354742 chr08:027354742 0 W/27354742-27354742 FN778-S Single Base Substitution C-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3863-S.SNP.8:27355436 chr08:027355436 0 W/27355436-27355436 FN3863-S SNP C -> G AC=1;AN=158;BQB=0.81847;DP=2539;DP4=1261,1172,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.34916e-08;MQSB=0.996582;RPB=0.977172;SGB=37.4429;VDB=0.41004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2110-S.SNP.8:27363949 chr08:027363949 0 W/27363949-27363949 FN2110-S SNP A -> T AC=1;AN=168;BQB=0.081196;DP=1879;DP4=871,956,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00202147;MQSB=0.851205;RPB=0.86359;SGB=-58.653;VDB=0.133824;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.8:27369671 chr08:027369671 0 W/27369671-27369671 FN751-S Single Base Substitution C-G INTRON HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN1182-S.SNP.8:27374355 chr08:027374355 0 W/27374355-27374355 FN1182-S Single Base Substitution T-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1697-S.SNP.8:27377576 chr08:027377576 0 W/27377576-27377576 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.763657;DP=3892;DP4=1909,1949,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.35598e-09;MQSB=0.963554;RPB=0.849397;SGB=36.2493;VDB=0.829464;EFF=INTRON(MODIFIER||||323|LOC_Os08g43320|protein_coding|CODING|LOC_Os08g43320.1|2|1) FN574-S.SNP.8:27378330 chr08:027378330 0 W/27378330-27378330 FN574-S Single Base Substitution C-T INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN3782-S.SNP.8:27378750 chr08:027378750 0 W/27378750-27378750 FN3782-S SNP G -> A AC=1;AN=190;BQB=0.987198;DP=2771;DP4=1282,1350,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.32935e-05;MQSB=0.0241659;RPB=0.961296;SGB=25.439;VDB=0.387587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P38L|323|LOC_Os08g43320|protein_coding|CODING|LOC_Os08g43320.1|1|1) FN4025-S.SNP.8:27384675 chr08:027384675 0 W/27384675-27384675 FN4025-S SNP A -> T AC=2;AN=168;BQB=0.905589;DP=2730;DP4=1334,1245,11,12;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=2.05979e-12;MQSB=0.903742;RPB=0.595632;SGB=41.6313;VDB=0.081946;EFF=INTRON(MODIFIER||||616|LOC_Os08g43334|protein_coding|CODING|LOC_Os08g43334.1|3|1) FN3090-S.SNP.8:27386256 chr08:027386256 0 W/27386256-27386256 FN3090-S SNP T -> A AC=1;AN=184;BQB=0.897548;DP=2982;DP4=1423,1442,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.82263e-12;MQSB=0.763127;RPB=0.620045;SGB=60.4004;VDB=0.405333;EFF=INTRON(MODIFIER||||616|LOC_Os08g43334|protein_coding|CODING|LOC_Os08g43334.1|3|1) FN785-S.SNP.8:27386901 chr08:027386901 0 W/27386901-27386901 FN785-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN4011-S.SNP.8:27391145 chr08:027391145 0 W/27391145-27391145 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.809924;DP=2943;DP4=1453,1354,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.76391e-12;MQSB=0.999917;RPB=0.336751;SGB=12.7756;VDB=0.680968;EFF=INTERGENIC(MODIFIER||||||||||1) FN704-S.SNP.8:27404700 chr08:027404700 0 W/27404700-27404700 FN704-S Single Base Substitution C-T INTRON HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1501-S.SNP.8:27409122 chr08:027409122 0 W/27409122-27409122 FN1501-S Single Base Substitution A-T START_GAINED HET LOC_Os08g43380 TBC domain containing protein, expressed SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1512-S.SNP.8:27417099 chr08:027417099 0 W/27417099-27417099 FN1512-S Single Base Substitution T-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN229-S.SNP.8:27425447 chr08:027425447 0 W/27425447-27425447 FN229-S Single Base Substitution C-T INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN4002-S.SNP.8:27425643 chr08:027425643 0 W/27425643-27425643 FN4002-S SNP A -> G AC=1;AN=168;BQB=0.998011;DP=2567;DP4=1132,1309,12,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.81838e-09;MQSB=0.997524;RPB=0.419234;SGB=24.6155;VDB=0.857478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.8:27426258 chr08:027426258 0 W/27426258-27426258 FN3503-S SNP G -> T AC=2;AN=188;BQB=0.987206;DP=2552;DP4=1124,1340,4,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.10323e-07;MQSB=0.929741;RPB=0.78372;SGB=28.8977;VDB=0.873986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.8:27426575 chr08:027426575 0 W/27426575-27426575 FN2780-S SNP A -> T AC=1;AN=198;BQB=0.502158;DP=4380;DP4=2112,2029,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=5.03754e-06;MQSB=0.00878293;RPB=0.563035;SGB=54.144;VDB=0.66923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.8:27435383 chr08:027435383 0 W/27435383-27435383 FN3832-S SNP T -> G AC=2;AN=190;BQB=0.966294;DP=2793;DP4=1503,1186,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.89321e-17;MQSB=0.962412;RPB=0.992088;SGB=100.07;VDB=0.320325;EFF=UTR_3_PRIME(MODIFIER||67||1003|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.1|13|1),UTR_3_PRIME(MODIFIER||67||987|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.2|14|1),UTR_3_PRIME(MODIFIER||67||986|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.3|14|1),UTR_3_PRIME(MODIFIER||67||873|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.4|13|1) FN2404.SNP.8:27440695 chr08:027440695 0 W/27440695-27440695 FN2404 SNP A -> T AC=1;AN=200;BQB=0.799008;DP=5031;DP4=2566,2160,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.83768e-17;MQSB=0.999107;RPB=0.9415;SGB=108.768;VDB=0.526331;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T221|1003|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T205|987|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T205|986|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.3|7|1),SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T91|873|LOC_Os08g43400|protein_coding|CODING|LOC_Os08g43400.4|6|1) FN1049-S.SNP.8:27454714 chr08:027454714 0 W/27454714-27454714 FN1049-S Single Base Substitution C-A INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN695-S.SNP.8:27459081 chr08:027459081 0 W/27459081-27459081 FN695-S Single Base Substitution C-T INTRON HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3944-S.SNP.8:27461770 chr08:027461770 0 W/27461770-27461770 FN3944-S SNP A -> G AC=2;AN=168;BQB=0.91318;DP=2714;DP4=1327,1240,12,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.18545e-11;MQSB=0.946387;RPB=0.606835;SGB=55.3328;VDB=0.016628;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.8:27468918 chr08:027468918 0 W/27468918-27468918 FN700-S Single Base Substitution C-T INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1624-S.SNP.8:27473254 chr08:027473254 0 W/27473254-27473254 FN1624-S Single Base Substitution T-C INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN3395-S.SNP.8:27483055 chr08:027483055 0 W/27483055-27483055 FN3395-S SNP T -> A AC=2;AN=184;BQB=0.953571;DP=3232;DP4=1606,1508,19,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.72382e-20;MQSB=0.998271;RPB=0.836638;SGB=76.2326;VDB=0.564932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.8:27483686 chr08:027483686 0 W/27483686-27483686 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.500317;DP=2872;DP4=1478,1252,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.352e-05;MQSB=0.754506;RPB=0.600212;SGB=-17.3229;VDB=0.559446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3601-S.SNP.8:27486290 chr08:027486290 0 W/27486290-27486290 FN3601-S SNP C -> T AC=1;AN=190;BQB=0.735522;DP=2821;DP4=1278,1422,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.73537e-09;MQSB=0.999399;RPB=0.512397;SGB=76.4186;VDB=0.0454028;EFF=UTR_3_PRIME(MODIFIER||415||144|LOC_Os08g43450|protein_coding|CODING|LOC_Os08g43450.1|2|1) FN3436-S.SNP.8:27490137 chr08:027490137 0 W/27490137-27490137 FN3436-S SNP C -> A AC=1;AN=184;BQB=0.899097;DP=2421;DP4=1068,1257,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.09621e-09;MQSB=0.993987;RPB=0.671604;SGB=57.786;VDB=0.412929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.8:27495602 chr08:027495602 0 W/27495602-27495602 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.871664;DP=3774;DP4=1928,1688,7,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000529942;MQB=2.19657e-10;MQSB=0.107392;RPB=0.750592;SGB=103.004;VDB=0.582894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.8:27501621 chr08:027501621 0 W/27501621-27501621 FN1519-S Single Base Substitution T-C INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1353-S.SNP.8:27502596 chr08:027502596 0 W/27502596-27502596 FN1353-S Single Base Substitution G-A INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1353-S.SNP.8:27502597 chr08:027502597 0 W/27502597-27502597 FN1353-S Single Base Substitution C-A INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3526-S.SNP.8:27503368 chr08:027503368 0 W/27503368-27503368 FN3526-S SNP C -> T AC=2;AN=188;BQB=0.652089;DP=2440;DP4=932,1366,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.31372e-13;MQSB=0.00039388;RPB=0.997253;SGB=-8.48022;VDB=0.0531206;EFF=INTRON(MODIFIER||||305|LOC_Os08g43480|protein_coding|CODING|LOC_Os08g43480.1|3|1),INTRON(MODIFIER||||266|LOC_Os08g43480|protein_coding|CODING|LOC_Os08g43480.2|2|1) FN4138-S.SNP.8:27509308 chr08:027509308 0 W/27509308-27509308 FN4138-S SNP T -> C AC=2;AN=170;BQB=0.443759;DP=1956;DP4=1186,683,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.78978e-09;MQSB=0.0216183;RPB=0.815232;SGB=69.3045;VDB=0.562277;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.8:27510321 chr08:027510321 0 W/27510321-27510321 FN591-S Single Base Substitution A-G INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN4235-S.SNP.8:27523048 chr08:027523048 0 W/27523048-27523048 FN4235-S SNP T -> A AC=1;AN=170;BQB=0.999132;DP=1914;DP4=805,1055,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84526e-08;MQSB=0.988203;RPB=0.735405;SGB=34.878;VDB=0.419848;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.8:27532639 chr08:027532639 0 W/27532639-27532639 FN498-S Single Base Substitution G-A INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN498-S.SNP.8:27532640 chr08:027532640 0 W/27532640-27532640 FN498-S Single Base Substitution T-A INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN3465-S.SNP.8:27539922 chr08:027539922 0 W/27539922-27539922 FN3465-S SNP G -> T AC=1;AN=184;BQB=0.949618;DP=2403;DP4=1213,1113,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.26335e-08;MQSB=0.958628;RPB=0.991207;SGB=48.7425;VDB=0.888914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.8:27540871 chr08:027540871 0 W/27540871-27540871 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN483-S.SNP.8:27560556 chr08:027560556 0 W/27560556-27560556 FN483-S Single Base Substitution T-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3949-S.SNP.8:27565723 chr08:027565723 0 W/27565723-27565723 FN3949-S SNP G -> A AC=1;AN=168;BQB=0.994857;DP=2848;DP4=1399,1346,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.16954e-14;MQSB=0.967122;RPB=0.096742;SGB=100.912;VDB=0.160409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.8:27580952 chr08:027580952 0 W/27580952-27580952 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.976904;DP=4686;DP4=2150,2217,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.3544e-12;MQSB=0.551745;RPB=0.846797;SGB=14.3054;VDB=0.854627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.8:27582403 chr08:027582403 0 W/27582403-27582403 FN1529-S Single Base Substitution A-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2345.SNP.8:27592818 chr08:027592818 0 W/27592818-27592818 FN2345 SNP T -> A AC=1;AN=192;BQB=0.872573;DP=5290;DP4=2559,2385,17,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.33478e-20;MQSB=0.982679;RPB=0.731363;SGB=72.5078;VDB=0.338253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.8:27596037 chr08:027596037 0 W/27596037-27596037 FN1014-S Single Base Substitution C-T INTRON HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN3994-S.SNP.8:27596037 chr08:027596037 0 W/27596037-27596037 FN3994-S SNP C -> T AC=2;AN=168;BQB=0.983895;DP=2083;DP4=1164,786,16,14;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.85068e-12;MQSB=0.928314;RPB=0.373822;SGB=93.0718;VDB=0.00477315;EFF=INTRON(MODIFIER||||522|LOC_Os08g43654|protein_coding|CODING|LOC_Os08g43654.1|1|1) FN1301-S.SNP.8:27603968 chr08:027603968 0 W/27603968-27603968 FN1301-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN564-S.SNP.8:27610375 chr08:027610375 0 W/27610375-27610375 FN564-S Single Base Substitution T-A INTRON HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN564-S.SNP.8:27612835 chr08:027612835 0 W/27612835-27612835 FN564-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2429.SNP.8:27613375 chr08:027613375 0 W/27613375-27613375 FN2429 SNP C -> T AC=1;AN=200;BQB=0.796472;DP=4740;DP4=2236,2174,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.14769e-06;MQSB=0.89722;RPB=0.954456;SGB=16.4591;VDB=0.752318;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R972|1254|LOC_Os08g43680|protein_coding|CODING|LOC_Os08g43680.1|4|1) FN1373-S.SNP.8:27624035 chr08:027624035 0 W/27624035-27624035 FN1373-S Single Base Substitution C-G INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1190-S.SNP.8:27624684 chr08:027624684 0 W/27624684-27624684 FN1190-S Single Base Substitution T-C INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2488.SNP.8:27626233 chr08:027626233 0 W/27626233-27626233 FN2488 SNP G -> A AC=1;AN=200;BQB=0.768635;DP=3362;DP4=1594,1215,7,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000892326;MQB=3.56444e-06;MQSB=0.0181986;RPB=0.373948;SGB=-0.141083;VDB=0.211747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A247V|318|LOC_Os08g43710|protein_coding|CODING|LOC_Os08g43710.1|1|1) FN3665-S.SNP.8:27626866 chr08:027626866 0 W/27626866-27626866 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.934452;DP=1916;DP4=936,879,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00208768;MQB=3.94061e-06;MQSB=2.39784e-05;RPB=0.739339;SGB=43.2083;VDB=0.406539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G36E|318|LOC_Os08g43710|protein_coding|CODING|LOC_Os08g43710.1|1|1) FN4110-S.SNP.8:27633818 chr08:027633818 0 W/27633818-27633818 FN4110-S SNP T -> A AC=1;AN=182;BQB=0.894555;DP=3080;DP4=1506,1459,10,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12824e-13;MQSB=0.94147;RPB=0.902213;SGB=38.2092;VDB=0.533949;EFF=INTERGENIC(MODIFIER||||||||||1) FN464-S.SNP.8:27638003 chr08:027638003 0 W/27638003-27638003 FN464-S Single Base Substitution A-G INTRON HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN2266-S.SNP.8:27641364 chr08:027641364 0 W/27641364-27641364 FN2266-S SNP A -> T AC=2;AN=190;BQB=0.977474;DP=3661;DP4=1842,1463,9,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.44312e-12;MQSB=0.013998;RPB=0.977784;SGB=103.742;VDB=0.171566;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Tcg|T231S|264|LOC_Os08g43740|protein_coding|CODING|LOC_Os08g43740.1|1|1) FN2537-S.SNP.8:27645332 chr08:027645332 0 W/27645332-27645332 FN2537-S SNP T -> A AC=1;AN=198;BQB=0.603231;DP=4294;DP4=2005,2014,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.64764e-12;MQSB=0.951158;RPB=0.98563;SGB=44.9151;VDB=0.685795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M42K|237|LOC_Os08g43760|protein_coding|CODING|LOC_Os08g43760.1|1|1) FN2445.SNP.8:27645799 chr08:027645799 0 W/27645799-27645799 FN2445 SNP T -> C AC=1;AN=200;BQB=0.901819;DP=4494;DP4=2273,2003,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000530641;MQSB=0.993237;RPB=0.838298;SGB=22.2439;VDB=0.0270139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C198R|237|LOC_Os08g43760|protein_coding|CODING|LOC_Os08g43760.1|1|1) FN3356-S.SNP.8:27646194 chr08:027646194 0 W/27646194-27646194 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.999626;DP=2873;DP4=1431,1354,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.08161e-11;MQSB=0.955826;RPB=0.459536;SGB=49.835;VDB=0.507604;EFF=UTR_3_PRIME(MODIFIER||273||237|LOC_Os08g43760|protein_coding|CODING|LOC_Os08g43760.1|1|1) FN1099-S.SNP.8:27649648 chr08:027649648 0 W/27649648-27649648 FN1099-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g43780 carrier, putative, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2440.SNP.8:27655991 chr08:027655991 0 W/27655991-27655991 FN2440 SNP T -> A AC=2;AN=200;BQB=0.942872;DP=4839;DP4=2451,2054,36,39;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.48853e-41;MQSB=0.0177546;RPB=0.955874;SGB=249.998;VDB=0.715213;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V18D|235|LOC_Os08g43810|protein_coding|CODING|LOC_Os08g43810.1|1|1) FN-122.SNP.8:27659755 chr08:027659755 0 W/27659755-27659755 FN-122 Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1440-S.SNP.8:27671527 chr08:027671527 0 W/27671527-27671527 FN1440-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN577-S.SNP.8:27676351 chr08:027676351 0 W/27676351-27676351 FN577-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN-366.SNP.8:27677713 chr08:027677713 0 W/27677713-27677713 FN-366 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g43910 expressed protein SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3857-S.SNP.8:27685812 chr08:027685812 0 W/27685812-27685812 FN3857-S SNP A -> G AC=2;AN=158;BQB=0.99925;DP=2599;DP4=1475,1019,18,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.07057e-14;MQSB=0.99189;RPB=0.680166;SGB=77.8763;VDB=0.148768;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.8:27690350 chr08:027690350 0 W/27690350-27690350 FN347-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2544-S.SNP.8:27699212 chr08:027699212 0 W/27699212-27699212 FN2544-S SNP T -> A AC=1;AN=198;BQB=0.955014;DP=4315;DP4=2287,1802,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.73031e-10;MQSB=0.851126;RPB=0.595971;SGB=77.1196;VDB=0.103535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E198V|386|LOC_Os08g44000|protein_coding|CODING|LOC_Os08g44000.1|4|1) FN-147.SNP.8:27699415 chr08:027699415 0 W/27699415-27699415 FN-147 Single Base Substitution G-C INTRON HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN3715-S.SNP.8:27699635 chr08:027699635 0 W/27699635-27699635 FN3715-S SNP T -> C AC=2;AN=190;BQB=0.831942;DP=2935;DP4=1251,1490,18,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.15843e-22;MQSB=0.877315;RPB=0.134031;SGB=185.712;VDB=0.969339;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I136V|386|LOC_Os08g44000|protein_coding|CODING|LOC_Os08g44000.1|3|1) FN3444-S.SNP.8:27701256 chr08:027701256 0 W/27701256-27701256 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.916189;DP=2980;DP4=1165,1662,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000122348;MQSB=0.000237314;RPB=0.943465;SGB=57.786;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.8:27712017 chr08:027712017 0 W/27712017-27712017 FN2704-S SNP A -> T AC=2;AN=200;BQB=0.986754;DP=5026;DP4=2440,2335,29,40;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.27068e-40;MQSB=0.438501;RPB=0.806685;SGB=238.554;VDB=0.0813079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E500D|597|LOC_Os08g44015|protein_coding|CODING|LOC_Os08g44015.1|10|1) 705-6.SNP.8:27720002 chr08:027720002 0 W/27720002-27720002 705-6 Single Base Substitution C-G SYNONYMOUS_CODING Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN3478-S.SNP.8:27726962 chr08:027726962 0 W/27726962-27726962 FN3478-S SNP A -> T AC=1;AN=184;BQB=0.671366;DP=3081;DP4=1249,1726,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9504e-08;MQSB=0.958447;RPB=0.957519;SGB=28.3187;VDB=0.960672;EFF=INTRON(MODIFIER||||606|LOC_Os08g44040|protein_coding|CODING|LOC_Os08g44040.1|2|1) FN2387.SNP.8:27728768 chr08:027728768 0 W/27728768-27728768 FN2387 SNP C -> T AC=1;AN=192;BQB=0.380733;DP=4747;DP4=2329,2130,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000210659;MQB=1.53476e-08;MQSB=0.33509;RPB=0.18756;SGB=39.78;VDB=0.550319;EFF=INTRON(MODIFIER||||606|LOC_Os08g44040|protein_coding|CODING|LOC_Os08g44040.1|4|1) FN2751-S.SNP.8:27730565 chr08:027730565 0 W/27730565-27730565 FN2751-S SNP G -> T AC=1;AN=200;BQB=0.811178;DP=5226;DP4=2610,2367,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000574053;MQB=1.4505e-09;MQSB=0.576004;RPB=0.985783;SGB=54.6902;VDB=0.614059;EFF=INTRON(MODIFIER||||606|LOC_Os08g44040|protein_coding|CODING|LOC_Os08g44040.1|11|1) FN3800-S.SNP.8:27734603 chr08:027734603 0 W/27734603-27734603 FN3800-S SNP C -> T AC=2;AN=190;BQB=0.769084;DP=2815;DP4=999,1674,9,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.59199e-13;MQSB=0.714906;RPB=0.999618;SGB=126.511;VDB=0.633716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R203K|548|LOC_Os08g44050|protein_coding|CODING|LOC_Os08g44050.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R203K|548|LOC_Os08g44050|protein_coding|CODING|LOC_Os08g44050.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R203K|548|LOC_Os08g44050|protein_coding|CODING|LOC_Os08g44050.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R203K|552|LOC_Os08g44050|protein_coding|CODING|LOC_Os08g44050.1|4|1) FN2091-S.SNP.8:27740012 chr08:027740012 0 W/27740012-27740012 FN2091-S SNP T -> C AC=1;AN=168;BQB=0.639269;DP=3646;DP4=1941,1666,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.53418e-15;MQSB=0.940517;RPB=0.850555;SGB=-75.914;VDB=0.243279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3799-S.SNP.8:27740300 chr08:027740300 0 W/27740300-27740300 FN3799-S SNP T -> C AC=1;AN=190;BQB=0.93862;DP=2784;DP4=1283,1426,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27143e-05;MQSB=0.971565;RPB=0.964736;SGB=39.9877;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN-115 Single Base Substitution C-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-200.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN-200 Single Base Substitution C-T INTERGENIC HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN-278.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN-278 Single Base Substitution C-T INTERGENIC HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-309.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN-309 Single Base Substitution C-T INTERGENIC HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1058-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN1058-S Single Base Substitution C-T INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1363-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN1363-S Single Base Substitution C-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1371-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN1371-S Single Base Substitution C-T INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2084-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN2084-S SNP C -> T AC=1;AN=168;BQB=0.792483;DP=4141;DP4=2081,2022,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.80992e-12;MQSB=0.994904;RPB=0.879302;SGB=14.2064;VDB=0.933725;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN2469 SNP C -> T AC=1;AN=200;BQB=0.764989;DP=5072;DP4=2506,2329,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.23493e-17;MQSB=0.893354;RPB=0.98506;SGB=87.1368;VDB=0.687251;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN3288-S SNP C -> T AC=2;AN=184;BQB=0.733323;DP=3151;DP4=1679,1341,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.63864e-16;MQSB=0.995065;RPB=0.894177;SGB=58.5801;VDB=0.496893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN3592-S SNP C -> T AC=2;AN=188;BQB=0.831825;DP=2857;DP4=1505,1250,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.37206e-18;MQSB=0.981643;RPB=0.450363;SGB=148.931;VDB=0.751806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN3749-S SNP C -> T AC=2;AN=190;BQB=0.955794;DP=2920;DP4=1588,1226,12,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.53409e-11;MQSB=0.99884;RPB=0.390213;SGB=85.5263;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN3827-S SNP C -> T AC=1;AN=190;BQB=0.998779;DP=2750;DP4=1483,1172,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.84262e-10;MQSB=0.941208;RPB=0.840748;SGB=67.3108;VDB=0.986468;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN4134-S SNP C -> T AC=1;AN=182;BQB=0.909055;DP=3032;DP4=1547,1420,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.78128e-07;MQSB=0.979628;RPB=0.789937;SGB=48.6223;VDB=0.750182;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN555-S Single Base Substitution C-T INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN983-S.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 FN983-S Single Base Substitution C-T INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. W276-2-1.SNP.8:27746761 chr08:027746761 0 W/27746761-27746761 W276-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1344-S.SNP.8:27749671 chr08:027749671 0 W/27749671-27749671 FN1344-S Single Base Substitution A-T INTERGENIC HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-300.SNP.8:27750778 chr08:027750778 0 W/27750778-27750778 FN-300 Single Base Substitution A-G INTERGENIC HOMO SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN-301.SNP.8:27752972 chr08:027752972 0 W/27752972-27752972 FN-301 Single Base Substitution T-C INTERGENIC HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-104.SNP.8:27753465 chr08:027753465 0 W/27753465-27753465 FN-104 Single Base Substitution G-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN2187-S.SNP.8:27754843 chr08:027754843 0 W/27754843-27754843 FN2187-S SNP A -> G AC=1;AN=190;BQB=0.104643;DP=4102;DP4=1515,2287,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0029254;MQB=0.00662038;MQSB=0.595762;RPB=0.821494;SGB=80.9724;VDB=0.681899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.8:27756349 chr08:027756349 0 W/27756349-27756349 FN2224-S SNP C -> T AC=1;AN=190;BQB=0.96431;DP=3760;DP4=1894,1631,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000265957;MQB=6.95109e-05;MQSB=0.000299169;RPB=0.0210978;SGB=26.2136;VDB=0.0262629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S15F|172|LOC_Os08g44070|protein_coding|CODING|LOC_Os08g44070.1|1|1) FN2573-S.SNP.8:27759640 chr08:027759640 0 W/27759640-27759640 FN2573-S SNP A -> T AC=1;AN=198;BQB=0.911671;DP=4011;DP4=1986,1795,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000249314;MQB=1.6581e-10;MQSB=0.997451;RPB=0.994309;SGB=9.3494;VDB=0.848684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K20M|192|LOC_Os08g44080|protein_coding|CODING|LOC_Os08g44080.1|1|1) FN691-S.SNP.8:27768973 chr08:027768973 0 W/27768973-27768973 FN691-S Single Base Substitution C-T INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3631-S.SNP.8:27779621 chr08:027779621 0 W/27779621-27779621 FN3631-S SNP G -> A AC=1;AN=190;BQB=0.75805;DP=2879;DP4=1432,1312,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000729073;MQSB=0.950888;RPB=0.517778;SGB=21.8853;VDB=0.660946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.8:27780237 chr08:027780237 0 W/27780237-27780237 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.613334;DP=3803;DP4=1732,1873,2,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000788851;MQB=0.000127654;MQSB=0.211671;RPB=0.46356;SGB=26.5745;VDB=0.587934;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.8:27783867 chr08:027783867 0 W/27783867-27783867 W472-5-1 Single Base Substitution G-A INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN-234.SNP.8:27784487 chr08:027784487 0 W/27784487-27784487 FN-234 Single Base Substitution C-T INTRON HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN4253-S.SNP.8:27784899 chr08:027784899 0 W/27784899-27784899 FN4253-S SNP G -> T AC=2;AN=170;BQB=0.974075;DP=2403;DP4=1209,1109,13,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.26973e-13;MQSB=0.837627;RPB=0.76347;SGB=83.4133;VDB=0.103823;EFF=INTRON(MODIFIER||||464|LOC_Os08g44124|protein_coding|CODING|LOC_Os08g44124.1|1|1) FN4253-S.SNP.8:27784900 chr08:027784900 0 W/27784900-27784900 FN4253-S SNP C -> T AC=2;AN=170;BQB=0.979092;DP=2396;DP4=1217,1107,12,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.02495e-12;MQSB=0.768539;RPB=0.933892;SGB=74.528;VDB=0.143887;EFF=INTRON(MODIFIER||||464|LOC_Os08g44124|protein_coding|CODING|LOC_Os08g44124.1|1|1) FN682-S.SNP.8:27802674 chr08:027802674 0 W/27802674-27802674 FN682-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g44160 expressed protein SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN1281-S.SNP.8:27804429 chr08:027804429 0 W/27804429-27804429 FN1281-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os08g44170 transposon protein, putative, unclassified, expressed SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2701-S.SNP.8:27815315 chr08:027815315 0 W/27815315-27815315 FN2701-S SNP T -> C AC=1;AN=200;BQB=0.935316;DP=4902;DP4=2275,2355,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09846e-14;MQSB=0.998324;RPB=0.755894;SGB=87.1368;VDB=0.826312;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.8:27817736 chr08:027817736 0 W/27817736-27817736 FN2438 SNP C -> T AC=1;AN=200;BQB=0.849749;DP=4820;DP4=2464,2005,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37433e-11;MQSB=0.961647;RPB=0.924148;SGB=37.3004;VDB=0.672932;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.8:27822056 chr08:027822056 0 W/27822056-27822056 705-6 Single Base Substitution A-G INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN469-S.SNP.8:27825995 chr08:027825995 0 W/27825995-27825995 FN469-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g44200 ECT5, putative, expressed SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN1497-S.SNP.8:27831334 chr08:027831334 0 W/27831334-27831334 FN1497-S Single Base Substitution C-T INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3311-S.SNP.8:27831968 chr08:027831968 0 W/27831968-27831968 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.997361;DP=3395;DP4=1618,1672,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.08296e-14;MQSB=0.997575;RPB=0.999186;SGB=103.004;VDB=0.504514;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-220-1.SNP.8:27832192 chr08:027832192 0 W/27832192-27832192 FN_N1-220-1 Single Base Substitution C-T Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN4126-S.SNP.8:27832694 chr08:027832694 0 W/27832694-27832694 FN4126-S SNP G -> A AC=1;AN=182;BQB=0.785457;DP=3047;DP4=1345,1624,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.12309e-06;MQSB=0.826358;RPB=0.146263;SGB=28.6061;VDB=0.421703;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.8:27835798 chr08:027835798 0 W/27835798-27835798 FN4116-S SNP T -> G AC=1;AN=182;BQB=0.986918;DP=3337;DP4=1622,1585,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.95615e-07;MQSB=0.999996;RPB=0.407139;SGB=48.6223;VDB=0.7861;EFF=INTRON(MODIFIER||||224|LOC_Os08g44220|protein_coding|CODING|LOC_Os08g44220.1|1|1) FN1707-S.SNP.8:27837595 chr08:027837595 0 W/27837595-27837595 FN1707-S SNP C -> T AC=1;AN=188;BQB=0.105166;DP=2231;DP4=924,1253,5,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.4146e-09;MQSB=0.9518;RPB=0.958232;SGB=13.2547;VDB=0.969204;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q164|224|LOC_Os08g44220|protein_coding|CODING|LOC_Os08g44220.1|1|1) FN_955-1.SNP.8:27837911 chr08:027837911 0 W/27837911-27837911 FN_955-1 Single Base Substitution A-G HET LOC_Os08g44220 GLTP domain containing protein, putative, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN_955-1.SNP.8:27837912 chr08:027837912 0 W/27837912-27837912 FN_955-1 Single Base Substitution G-T HET LOC_Os08g44220 GLTP domain containing protein, putative, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2675-S.SNP.8:27848406 chr08:027848406 0 W/27848406-27848406 FN2675-S SNP G -> C AC=1;AN=200;BQB=0.833784;DP=4819;DP4=2089,2506,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.725e-17;MQSB=0.749274;RPB=0.993678;SGB=123.342;VDB=0.738136;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.8:27849641 chr08:027849641 0 W/27849641-27849641 FN1422-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g44240 AAA-type ATPase family protein, putative, expressed SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN687-S.SNP.8:27851721 chr08:027851721 0 W/27851721-27851721 FN687-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os08g44240 AAA-type ATPase family protein, putative, expressed SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-215.SNP.8:27856331 chr08:027856331 0 W/27856331-27856331 FN-215 Single Base Substitution A-T INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1276-S.SNP.8:27864362 chr08:027864362 0 W/27864362-27864362 FN1276-S Single Base Substitution A-T INTRON HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3790-S.SNP.8:27876488 chr08:027876488 0 W/27876488-27876488 FN3790-S SNP A -> G AC=2;AN=190;BQB=0.999997;DP=3081;DP4=1316,1623,11,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.05397e-16;MQSB=0.899745;RPB=1;SGB=131.065;VDB=0.579653;EFF=UTR_3_PRIME(MODIFIER||112||385|LOC_Os08g44270|protein_coding|CODING|LOC_Os08g44270.1|1|1) FN-170.SNP.8:27878378 chr08:027878378 0 W/27878378-27878378 FN-170 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g44280 protein-L-isoaspartate O-methyltransferase, putative, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3964-S.SNP.8:27881320 chr08:027881320 0 W/27881320-27881320 FN3964-S SNP A -> G AC=1;AN=168;BQB=0.259411;DP=2653;DP4=1096,1428,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46432e-08;MQSB=0.990996;RPB=0.976324;SGB=55.3328;VDB=0.627504;EFF=INTRON(MODIFIER||||305|LOC_Os08g44290|protein_coding|CODING|LOC_Os08g44290.1|2|1) W463-2-1.SNP.8:27882322 chr08:027882322 0 W/27882322-27882322 W463-2-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3039-S.SNP.8:27884637 chr08:027884637 0 W/27884637-27884637 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.916258;DP=3646;DP4=1829,1660,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.6503e-10;MQSB=0.642597;RPB=0.365341;SGB=53.3568;VDB=0.580129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P240L|405|LOC_Os08g44300|protein_coding|CODING|LOC_Os08g44300.1|1|1) FN960-S.SNP.8:27888416 chr08:027888416 0 W/27888416-27888416 FN960-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g44310 expressed protein SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN960-S.SNP.8:27888420 chr08:027888420 0 W/27888420-27888420 FN960-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os08g44310 expressed protein SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1190-S.SNP.8:27900836 chr08:027900836 0 W/27900836-27900836 FN1190-S Single Base Substitution C-T INTRON HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3964-S.SNP.8:27908516 chr08:027908516 0 W/27908516-27908516 FN3964-S SNP C -> T AC=2;AN=168;BQB=0.999337;DP=2758;DP4=1309,1328,18,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.55038e-21;MQSB=0.956507;RPB=0.630367;SGB=80.5243;VDB=0.841938;EFF=INTRON(MODIFIER||||147|LOC_Os08g44350|protein_coding|CODING|LOC_Os08g44350.1|5|1) FN2344.SNP.8:27919722 chr08:027919722 0 W/27919722-27919722 FN2344 SNP A -> T AC=1;AN=192;BQB=0.982313;DP=5790;DP4=3229,2192,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.17398e-17;MQSB=0.936627;RPB=0.840412;SGB=103.938;VDB=0.902435;EFF=INTRON(MODIFIER||||509|LOC_Os08g44360|protein_coding|CODING|LOC_Os08g44360.1|2|1) FN1478-S.SNP.8:27921511 chr08:027921511 0 W/27921511-27921511 FN1478-S Single Base Substitution G-T INTRON Homo SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2290.SNP.8:27921541 chr08:027921541 0 W/27921541-27921541 FN2290 SNP G -> A AC=1;AN=192;BQB=0.993293;DP=4941;DP4=2517,2068,17,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08793e-19;MQSB=0.992637;RPB=0.280498;SGB=-84.6;VDB=0.508237;EFF=INTRON(MODIFIER||||509|LOC_Os08g44360|protein_coding|CODING|LOC_Os08g44360.1|5|1) FN987-S.SNP.8:27936620 chr08:027936620 0 W/27936620-27936620 FN987-S Single Base Substitution A-T INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN3790-S.SNP.8:27937548 chr08:027937548 0 W/27937548-27937548 FN3790-S SNP G -> A AC=2;AN=190;BQB=0.997049;DP=2299;DP4=1060,1158,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.39898e-14;MQSB=0.894061;RPB=0.7157;SGB=103.742;VDB=0.808937;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.8:27939591 chr08:027939591 0 W/27939591-27939591 FN-116 Single Base Substitution C-T INTRON HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN1304-S.SNP.8:27943503 chr08:027943503 0 W/27943503-27943503 FN1304-S Single Base Substitution A-T INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1541-S.SNP.8:27943503 chr08:027943503 0 W/27943503-27943503 FN1541-S Single Base Substitution A-T INTRON Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN486-S.SNP.8:27943503 chr08:027943503 0 W/27943503-27943503 FN486-S Single Base Substitution A-T INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN728-S.SNP.8:27943503 chr08:027943503 0 W/27943503-27943503 FN728-S Single Base Substitution A-T INTRON HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN940-S.SNP.8:27943503 chr08:027943503 0 W/27943503-27943503 FN940-S Single Base Substitution A-T INTRON HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3416-S.SNP.8:27944912 chr08:027944912 0 W/27944912-27944912 FN3416-S SNP A -> G AC=1;AN=184;BQB=0.95688;DP=2558;DP4=1300,1196,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38774e-08;MQSB=0.947464;RPB=0.0745834;SGB=35.7479;VDB=0.485719;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cCa|L58P|409|LOC_Os08g44420|protein_coding|CODING|LOC_Os08g44420.1|14|1) FN2281.SNP.8:27948806 chr08:027948806 0 W/27948806-27948806 FN2281 SNP A -> G AC=1;AN=192;BQB=0.939825;DP=3056;DP4=1621,1064,19,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.20153e-11;MQSB=0.0304577;RPB=0.0566495;SGB=18.3052;VDB=0.879194;EFF=UTR_5_PRIME(MODIFIER||3618||409|LOC_Os08g44420|protein_coding|CODING|LOC_Os08g44420.1|1|1) FN4125-S.SNP.8:27948970 chr08:027948970 0 W/27948970-27948970 FN4125-S SNP G -> A AC=1;AN=182;BQB=0.994895;DP=2512;DP4=1258,1193,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.20188e-05;MQSB=0.113022;RPB=0.64551;SGB=44.1115;VDB=0.0153133;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.8:27951306 chr08:027951306 0 W/27951306-27951306 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.996471;DP=2199;DP4=1097,1047,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.98388e-07;MQSB=0.952942;RPB=0.679182;SGB=38.987;VDB=0.705725;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.8:27973245 chr08:027973245 0 W/27973245-27973245 FN955-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os08g44480 40S ribosomal protein S25, putative, expressed SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN3887-S.SNP.8:27974994 chr08:027974994 0 W/27974994-27974994 FN3887-S SNP G -> T AC=1;AN=158;BQB=0.996885;DP=2440;DP4=1327,1043,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.29004e-07;MQSB=0.985684;RPB=0.834176;SGB=60.1755;VDB=0.00220645;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.8:27975549 chr08:027975549 0 W/27975549-27975549 FN4107-S SNP C -> T AC=1;AN=182;BQB=0.98195;DP=3015;DP4=1529,1388,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.74127e-08;MQSB=0.937836;RPB=0.935741;SGB=48.6223;VDB=0.628582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.8:27984029 chr08:027984029 0 W/27984029-27984029 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.602297;DP=4982;DP4=2462,2237,8,18;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0451626;MQB=0.200056;MQSB=1.66425e-19;RPB=0.577574;SGB=83.5316;VDB=0.779886;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P1811L|2003|LOC_Os08g44500|protein_coding|CODING|LOC_Os08g44500.1|3|1) FN3560-S.SNP.8:27986354 chr08:027986354 0 W/27986354-27986354 FN3560-S SNP C -> T AC=1;AN=188;BQB=0.876416;DP=3620;DP4=1698,1843,15,16;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0359116;MQB=4.18194e-06;MQSB=0.333354;RPB=0.565325;SGB=135.302;VDB=0.958534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C1036Y|2003|LOC_Os08g44500|protein_coding|CODING|LOC_Os08g44500.1|3|1) FN4344-S.SNP.8:27987852 chr08:027987852 0 W/27987852-27987852 FN4344-S SNP A -> T AC=1;AN=170;BQB=0.222544;DP=2516;DP4=1277,1141,6,14;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0123211;MQB=8.32258e-10;MQSB=0.0104846;RPB=0.0251347;SGB=-112.081;VDB=0.837618;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C561S|2003|LOC_Os08g44500|protein_coding|CODING|LOC_Os08g44500.1|2|1) FN2271-S.SNP.8:27992938 chr08:027992938 0 W/27992938-27992938 FN2271-S SNP A -> T AC=1;AN=190;BQB=0.934765;DP=4900;DP4=2277,2202,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.73575e-13;MQSB=0.984051;RPB=0.851494;SGB=54.3062;VDB=0.642851;EFF=INTRON(MODIFIER||||927|LOC_Os08g44510|protein_coding|CODING|LOC_Os08g44510.1|2|1) FN3509-S.SNP.8:27995445 chr08:027995445 0 W/27995445-27995445 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.862707;DP=2690;DP4=1274,1376,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.1379e-07;MQSB=0.851848;RPB=0.40543;SGB=28.8977;VDB=0.685797;EFF=INTRON(MODIFIER||||927|LOC_Os08g44510|protein_coding|CODING|LOC_Os08g44510.1|10|1) FN-217.SNP.8:28001586 chr08:028001586 0 W/28001586-28001586 FN-217 Single Base Substitution T-A INTRON HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2711-S.SNP.8:28003104 chr08:028003104 0 W/28003104-28003104 FN2711-S SNP A -> T AC=1;AN=200;BQB=0.376462;DP=4782;DP4=2366,2173,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26281e-17;MQSB=0.723135;RPB=0.24056;SGB=-112.043;VDB=0.423077;EFF=INTRON(MODIFIER||||178|LOC_Os08g44520|protein_coding|CODING|LOC_Os08g44520.1|1|1) FN355-S.SNP.8:28007087 chr08:028007087 0 W/28007087-28007087 FN355-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g44530 dihydroxy-acid dehydratase, putative, expressed SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN_1017-1.SNP.8:28011079 chr08:028011079 0 W/28011079-28011079 FN_1017-1 Single Base Substitution G-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2628-S.SNP.8:28014143 chr08:028014143 0 W/28014143-28014143 FN2628-S SNP C -> T AC=2;AN=200;BQB=0.578973;DP=4386;DP4=2328,1812,34,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.76624e-32;MQSB=0.996368;RPB=0.867011;SGB=195.292;VDB=0.341054;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P10L|580|LOC_Os08g44560|protein_coding|CODING|LOC_Os08g44560.1|1|1) FN791-S.SNP.8:28026373 chr08:028026373 0 W/28026373-28026373 FN791-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3285-S.SNP.8:28026580 chr08:028026580 0 W/28026580-28026580 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.987982;DP=4661;DP4=2608,1919,18,7;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0489165;MQB=0.2526;MQSB=3.08286e-44;RPB=0.946214;SGB=48.493;VDB=0.603558;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A81|2030|LOC_Os08g44570|protein_coding|CODING|LOC_Os08g44570.1|1|1) FN2483.SNP.8:28027127 chr08:028027127 0 W/28027127-28027127 FN2483 SNP G -> A AC=2;AN=200;BQB=0.578149;DP=4396;DP4=2138,1992,28,13;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.0120564;MQB=0.00029029;MQSB=0.00019518;RPB=0.992922;SGB=183.209;VDB=0.446293;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A264T|2030|LOC_Os08g44570|protein_coding|CODING|LOC_Os08g44570.1|1|1) FN712-S.SNP.8:28036660 chr08:028036660 0 W/28036660-28036660 FN712-S Single Base Substitution G-A INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3456-S.SNP.8:28038380 chr08:028038380 0 W/28038380-28038380 FN3456-S SNP C -> T AC=1;AN=184;BQB=0.980061;DP=1592;DP4=999,525,11,0;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0326633;MQB=0.0448164;MQSB=2.51189e-14;RPB=0.686517;SGB=44.2207;VDB=0.755668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.8:28044823 chr08:028044823 0 W/28044823-28044823 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.99584;DP=2441;DP4=1107,1254,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.40105e-12;MQSB=0.778864;RPB=0.778235;SGB=36.7696;VDB=0.85144;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L359|383|LOC_Os08g44590|protein_coding|CODING|LOC_Os08g44590.1|2|1) FN1150-S.SNP.8:28048088 chr08:028048088 0 W/28048088-28048088 FN1150-S Single Base Substitution G-C INTRON HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN3312-S.SNP.8:28054027 chr08:028054027 0 W/28054027-28054027 FN3312-S SNP A -> G AC=1;AN=184;BQB=0.933389;DP=2998;DP4=1481,1405,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.71352e-09;MQSB=0.998187;RPB=0.470451;SGB=66.8296;VDB=0.84325;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.8:28069785 chr08:028069785 0 W/28069785-28069785 FN-394 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g44640 OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3326-S.SNP.8:28074225 chr08:028074225 0 W/28074225-28074225 FN3326-S SNP G -> T AC=1;AN=184;BQB=0.834595;DP=2502;DP4=1112,1287,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.45128e-10;MQSB=0.882385;RPB=0.269309;SGB=6.80232;VDB=0.308334;EFF=INTRON(MODIFIER||||468|LOC_Os08g44640|protein_coding|CODING|LOC_Os08g44640.1|11|1),INTRON(MODIFIER||||357|LOC_Os08g44640|protein_coding|CODING|LOC_Os08g44640.2|10|1) FN3326-S.SNP.8:28074226 chr08:028074226 0 W/28074226-28074226 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.988455;DP=2506;DP4=1129,1307,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01859e-08;MQSB=0.816341;RPB=0.487049;SGB=53.2642;VDB=0.801047;EFF=INTRON(MODIFIER||||468|LOC_Os08g44640|protein_coding|CODING|LOC_Os08g44640.1|11|1),INTRON(MODIFIER||||357|LOC_Os08g44640|protein_coding|CODING|LOC_Os08g44640.2|10|1) FN2422.SNP.8:28077847 chr08:028077847 0 W/28077847-28077847 FN2422 SNP T -> A AC=2;AN=200;BQB=0.966373;DP=4804;DP4=2250,2186,24,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.21282e-33;MQSB=0.0425404;RPB=0.778829;SGB=252.287;VDB=0.595503;EFF=INTRON(MODIFIER||||199|LOC_Os08g44660|protein_coding|CODING|LOC_Os08g44660.1|1|1) FN2422.SNP.8:28077848 chr08:028077848 0 W/28077848-28077848 FN2422 SNP C -> A AC=2;AN=200;BQB=0.403377;DP=4798;DP4=2239,2220,25,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.45447e-34;MQSB=0.0350152;RPB=0.526693;SGB=188.082;VDB=0.67966;EFF=INTRON(MODIFIER||||199|LOC_Os08g44660|protein_coding|CODING|LOC_Os08g44660.1|1|1) FN3384-S.SNP.8:28080198 chr08:028080198 0 W/28080198-28080198 FN3384-S SNP C -> A AC=2;AN=184;BQB=0.848545;DP=3605;DP4=1746,1706,8,16;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.00166436;MQB=0.0698424;MQSB=0.00028476;RPB=0.58599;SGB=74.4875;VDB=0.554182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.8:28083442 chr08:028083442 0 W/28083442-28083442 FN1182-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1462-S.SNP.8:28107109 chr08:028107109 0 W/28107109-28107109 FN1462-S Single Base Substitution T-A INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1590-S.SNP.8:28107877 chr08:028107877 0 W/28107877-28107877 FN1590-S Single Base Substitution G-A INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3399-S.SNP.8:28114417 chr08:028114417 0 W/28114417-28114417 FN3399-S SNP A -> C AC=2;AN=184;BQB=0.988405;DP=2422;DP4=912,1358,14,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23766e-14;MQSB=0.218643;RPB=0.51377;SGB=-8.45255;VDB=0.479192;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.8:28115870 chr08:028115870 0 W/28115870-28115870 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3888-S.SNP.8:28118236 chr08:028118236 0 W/28118236-28118236 FN3888-S SNP A -> T AC=1;AN=158;BQB=0.356456;DP=2194;DP4=1015,1041,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.37181e-06;MQSB=0.954173;RPB=0.942511;SGB=73.2838;VDB=0.991135;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.8:28125574 chr08:028125574 0 W/28125574-28125574 FN-174 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g44760 domain of unknown function DUF966 domain containing protein, expressed SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2788-S.SNP.8:28126094 chr08:028126094 0 W/28126094-28126094 FN2788-S SNP G -> A AC=2;AN=198;BQB=0.994846;DP=4010;DP4=1611,2150,21,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.90866e-30;MQSB=0.889806;RPB=0.959626;SGB=120.174;VDB=0.0205922;EFF=START_GAINED(LOW||||577|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.1|1|1),START_GAINED(LOW||||576|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.2|1|1),START_GAINED(LOW||||502|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.3|1|1),UTR_5_PRIME(MODIFIER||9||577|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.1|1|1),UTR_5_PRIME(MODIFIER||9||576|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.2|1|1),UTR_5_PRIME(MODIFIER||9||502|LOC_Os08g44760|protein_coding|CODING|LOC_Os08g44760.3|1|1) FN1384-S.SNP.8:28130065 chr08:028130065 0 W/28130065-28130065 FN1384-S Single Base Substitution T-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3668-S.SNP.8:28133806 chr08:028133806 0 W/28133806-28133806 FN3668-S SNP G -> A AC=1;AN=190;BQB=0.844475;DP=2809;DP4=1309,1355,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.43852e-07;MQSB=0.0324355;RPB=0.828414;SGB=43.2083;VDB=0.51905;EFF=INTRON(MODIFIER||||211|LOC_Os08g44770|protein_coding|CODING|LOC_Os08g44770.1|3|1),INTRON(MODIFIER||||207|LOC_Os08g44770|protein_coding|CODING|LOC_Os08g44770.2|3|1) FN4046-S.SNP.8:28139655 chr08:028139655 0 W/28139655-28139655 FN4046-S SNP C -> T AC=1;AN=168;BQB=0.990135;DP=2858;DP4=1449,1305,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.94742e-09;MQSB=0.472207;RPB=0.98947;SGB=38.1788;VDB=0.808233;EFF=INTRON(MODIFIER||||155|LOC_Os08g44800|protein_coding|CODING|LOC_Os08g44800.1|1|1) FN909-S.SNP.8:28141586 chr08:028141586 0 W/28141586-28141586 FN909-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os08g44810 lactate/malate dehydrogenase, putative, expressed SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2292.SNP.8:28147305 chr08:028147305 0 W/28147305-28147305 FN2292 SNP C -> A AC=1;AN=192;BQB=0.972533;DP=5431;DP4=2602,2514,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.84377e-11;MQSB=0.394019;RPB=0.903659;SGB=36.607;VDB=0.661628;EFF=UTR_5_PRIME(MODIFIER||25||433|LOC_Os08g44820|protein_coding|CODING|LOC_Os08g44820.4|1|1),INTRON(MODIFIER||||656|LOC_Os08g44820|protein_coding|CODING|LOC_Os08g44820.1|2|1),INTRON(MODIFIER||||618|LOC_Os08g44820|protein_coding|CODING|LOC_Os08g44820.2|2|1),INTRON(MODIFIER||||491|LOC_Os08g44820|protein_coding|CODING|LOC_Os08g44820.3|2|1),INTRON(MODIFIER||||510|LOC_Os08g44820|protein_coding|CODING|LOC_Os08g44820.5|1|1) FN-303.SNP.8:28150360 chr08:028150360 0 W/28150360-28150360 FN-303 Single Base Substitution T-A INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN820-S.SNP.8:28156553 chr08:028156553 0 W/28156553-28156553 FN820-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os08g44830 ZOS8-14 - C2H2 zinc finger protein, expressed SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN2421.SNP.8:28160301 chr08:028160301 0 W/28160301-28160301 FN2421 SNP T -> C AC=2;AN=200;BQB=0.995594;DP=5451;DP4=2654,2541,20,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.53366e-17;MQSB=4.66257e-07;RPB=0.692864;SGB=84.1935;VDB=0.279298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.8:28165605 chr08:028165605 0 W/28165605-28165605 FN2211-S SNP G -> A AC=1;AN=190;BQB=0.955838;DP=4149;DP4=2111,1774,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000241022;MQB=1.05253e-07;MQSB=0.758661;RPB=0.978952;SGB=50.3161;VDB=0.449311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.8:28167050 chr08:028167050 0 W/28167050-28167050 FN3902-S SNP G -> A AC=2;AN=158;BQB=0.881221;DP=1229;DP4=50,1139,1,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.88412e-07;MQSB=0.40885;RPB=0.902287;SGB=51.4366;VDB=0.529202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.8:28168937 chr08:028168937 0 W/28168937-28168937 FN3835-S SNP T -> C AC=1;AN=190;BQB=0.936887;DP=1997;DP4=1124,795,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06308e-06;MQSB=0.23074;RPB=0.900344;SGB=28.9929;VDB=0.342371;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.8:28178644 chr08:028178644 0 W/28178644-28178644 FN405-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os08g44860 aminopeptidase, putative, expressed SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3881-S.SNP.8:28178879 chr08:028178879 0 W/28178879-28178879 FN3881-S SNP T -> C AC=1;AN=158;BQB=0.862091;DP=2144;DP4=1046,1027,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.59482e-08;MQSB=0.977082;RPB=0.432705;SGB=21.4493;VDB=0.870706;EFF=INTRON(MODIFIER||||502|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.1|10|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.2|10|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.3|10|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.4|9|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.5|8|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.6|7|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.7|7|1),INTRON(MODIFIER||||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.8|7|1) FN3974-S.SNP.8:28180251 chr08:028180251 0 W/28180251-28180251 FN3974-S SNP A -> G AC=2;AN=168;BQB=0.821387;DP=2555;DP4=1242,1162,16,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.33369e-15;MQSB=0.915604;RPB=0.491797;SGB=136.358;VDB=0.643599;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V151A|502|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.1|6|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.2|6|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.3|6|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.4|5|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.5|4|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.6|3|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.7|3|1),UTR_5_PRIME(MODIFIER||3519||495|LOC_Os08g44860|protein_coding|CODING|LOC_Os08g44860.8|3|1) FN1657-S.SNP.8:28181135 chr08:028181135 0 W/28181135-28181135 FN1657-S Single Base Substitution C-A INTRON HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2095-S.SNP.8:28185936 chr08:028185936 0 W/28185936-28185936 FN2095-S SNP T -> A AC=2;AN=168;BQB=0.806468;DP=2391;DP4=1419,910,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.23056e-16;MQSB=0.954952;RPB=0.104944;SGB=29.9454;VDB=0.306174;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.8:28188082 chr08:028188082 0 W/28188082-28188082 FN3762-S SNP C -> T AC=1;AN=190;BQB=0.827484;DP=2794;DP4=1462,1210,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.66718e-08;MQSB=0.116747;RPB=0.652853;SGB=36.1006;VDB=0.515483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.8:28197871 chr08:028197871 0 W/28197871-28197871 FN1697-S SNP A -> C AC=1;AN=188;BQB=0.296597;DP=2735;DP4=1606,1102,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000365631;MQB=4.10388e-07;MQSB=0.98576;RPB=0.591449;SGB=-13.9132;VDB=0.277406;EFF=INTERGENIC(MODIFIER||||||||||1) FN-75.SNP.8:28202685 chr08:028202685 0 W/28202685-28202685 FN-75 Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2463.SNP.8:28206431 chr08:028206431 0 W/28206431-28206431 FN2463 SNP G -> A AC=1;AN=200;BQB=0.765699;DP=4000;DP4=1771,1955,7,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00179967;MQSB=1.94171e-07;RPB=0.387312;SGB=43.8747;VDB=0.604541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.8:28207727 chr08:028207727 0 W/28207727-28207727 FN3772-S SNP C -> A AC=1;AN=190;BQB=0.905843;DP=2812;DP4=1426,1277,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7153e-09;MQSB=0.886796;RPB=0.950384;SGB=58.2031;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.8:28207728 chr08:028207728 0 W/28207728-28207728 FN3772-S SNP C -> A AC=1;AN=190;BQB=0.76267;DP=2814;DP4=1445,1275,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78105e-08;MQSB=0.928608;RPB=0.826252;SGB=49.0954;VDB=0.0658059;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.8:28210739 chr08:028210739 0 W/28210739-28210739 FN-285 Single Base Substitution T-C INTRON HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN632-S.SNP.8:28214936 chr08:028214936 0 W/28214936-28214936 FN632-S Single Base Substitution A-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN632-S.SNP.8:28214937 chr08:028214937 0 W/28214937-28214937 FN632-S Single Base Substitution T-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN632-S.SNP.8:28214938 chr08:028214938 0 W/28214938-28214938 FN632-S Single Base Substitution C-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN886-S.SNP.8:28217997 chr08:028217997 0 W/28217997-28217997 FN886-S Single Base Substitution G-A INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1686-S.SNP.8:28220186 chr08:028220186 0 W/28220186-28220186 FN1686-S SNP G -> T AC=1;AN=188;BQB=0.300793;DP=3237;DP4=1055,2120,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.85193e-10;MQSB=0.97052;RPB=0.660576;SGB=36.2493;VDB=0.659919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.8:28220187 chr08:028220187 0 W/28220187-28220187 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.000320252;DP=3243;DP4=1053,2113,11,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18474e-06;MQSB=0.935565;RPB=0.372628;SGB=-400.057;VDB=0.965742;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.8:28220565 chr08:028220565 0 W/28220565-28220565 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.297783;DP=3857;DP4=1720,1920,15,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.54591e-15;MQSB=0.720024;RPB=0.459101;SGB=104.861;VDB=0.608214;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D158|241|LOC_Os08g44950|protein_coding|CODING|LOC_Os08g44950.1|1|1) FN-226.SNP.8:28223098 chr08:028223098 0 W/28223098-28223098 FN-226 Single Base Substitution G-A INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3782-S.SNP.8:28232512 chr08:028232512 0 W/28232512-28232512 FN3782-S SNP G -> C AC=2;AN=190;BQB=0.829691;DP=2361;DP4=1040,1202,10,12;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.294367;MQB=0.598324;MQSB=0.892204;RPB=0.993006;SGB=68.0854;VDB=0.989414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.8:28241120 chr08:028241120 0 W/28241120-28241120 FN2577-S SNP C -> G AC=2;AN=198;BQB=0.901368;DP=4096;DP4=1738,1995,17,13;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000244141;MQB=6.60155e-11;MQSB=0.0222507;RPB=0.998228;SGB=-6.09922;VDB=0.721839;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.8:28247521 chr08:028247521 0 W/28247521-28247521 FN482-S Single Base Substitution G-A INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN2682-S.SNP.8:28263394 chr08:028263394 0 W/28263394-28263394 FN2682-S SNP C -> A AC=2;AN=200;BQB=0.198278;DP=4736;DP4=2326,2145,20,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.42095e-14;MQSB=0.965713;RPB=0.653292;SGB=33.5675;VDB=0.797823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.8:28277486 chr08:028277486 0 W/28277486-28277486 FN2771-S SNP C -> T AC=2;AN=198;BQB=0.993577;DP=3817;DP4=2120,1510,14,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.93504e-16;MQSB=0.962994;RPB=0.999781;SGB=90.4807;VDB=0.489776;EFF=INTERGENIC(MODIFIER||||||||||1) FN803-S.SNP.8:28278484 chr08:028278484 0 W/28278484-28278484 FN803-S Single Base Substitution A-G INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2791-S.SNP.8:28278677 chr08:028278677 0 W/28278677-28278677 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.510706;DP=4349;DP4=1834,2123,8,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.40885e-14;MQSB=0.330144;RPB=0.272381;SGB=-10.2651;VDB=0.265651;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.8:28284060 chr08:028284060 0 W/28284060-28284060 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-213.SNP.8:28286713 chr08:028286713 0 W/28286713-28286713 FN-213 Single Base Substitution A-G INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN673-S.SNP.8:28287040 chr08:028287040 0 W/28287040-28287040 FN673-S Single Base Substitution A-G INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1514-S.SNP.8:28288483 chr08:028288483 0 W/28288483-28288483 FN1514-S Single Base Substitution C-T INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3354-S.SNP.8:28290117 chr08:028290117 0 W/28290117-28290117 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.907741;DP=3062;DP4=1591,1321,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.77141e-06;MQSB=0.724889;RPB=0.245313;SGB=21.6609;VDB=0.228571;EFF=UTR_3_PRIME(MODIFIER||375||662|LOC_Os08g45060|protein_coding|CODING|LOC_Os08g45060.1|1|1) FN3581-S.SNP.8:28291831 chr08:028291831 0 W/28291831-28291831 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.889863;DP=2009;DP4=969,937,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00146805;MQSB=0.000701516;RPB=0.787647;SGB=35.4339;VDB=0.305409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P217L|662|LOC_Os08g45060|protein_coding|CODING|LOC_Os08g45060.1|1|1) FN946-S.SNP.8:28293605 chr08:028293605 0 W/28293605-28293605 FN946-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os08g45070 expressed protein SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2123-S.SNP.8:28297002 chr08:028297002 0 W/28297002-28297002 FN2123-S SNP A -> G AC=1;AN=168;BQB=0.0609638;DP=3845;DP4=2040,1755,19,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.50665e-12;MQSB=0.965262;RPB=0.990949;SGB=-80.6216;VDB=0.951732;EFF=INTRON(MODIFIER||||1320|LOC_Os08g45080|protein_coding|CODING|LOC_Os08g45080.1|6|1) FN2123-S.SNP.8:28297012 chr08:028297012 0 W/28297012-28297012 FN2123-S SNP T -> A AC=1;AN=168;BQB=6.79583e-05;DP=3848;DP4=1975,1822,15,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.41706e-10;MQSB=0.936678;RPB=0.368263;SGB=-72.7757;VDB=0.171222;EFF=INTRON(MODIFIER||||1320|LOC_Os08g45080|protein_coding|CODING|LOC_Os08g45080.1|6|1) FN2123-S.SNP.8:28297013 chr08:028297013 0 W/28297013-28297013 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.00633225;DP=3831;DP4=1969,1816,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.43999e-10;MQSB=0.945473;RPB=0.8075;SGB=14.2064;VDB=0.319827;EFF=INTRON(MODIFIER||||1320|LOC_Os08g45080|protein_coding|CODING|LOC_Os08g45080.1|6|1) FN3342-S.SNP.8:28300076 chr08:028300076 0 W/28300076-28300076 FN3342-S SNP T -> C AC=1;AN=184;BQB=0.989637;DP=2743;DP4=1245,1401,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.58228e-06;MQSB=0.997305;RPB=0.973096;SGB=44.2207;VDB=0.227605;EFF=INTRON(MODIFIER||||1320|LOC_Os08g45080|protein_coding|CODING|LOC_Os08g45080.1|4|1) FN2704-S.SNP.8:28315571 chr08:028315571 0 W/28315571-28315571 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.700281;DP=4813;DP4=2017,2561,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94876e-14;MQSB=0.844356;RPB=0.896362;SGB=-8.26887;VDB=0.848231;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.8:28319688 chr08:028319688 0 W/28319688-28319688 FN_786-4-1 Single Base Substitution A-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-235.SNP.8:28320224 chr08:028320224 0 W/28320224-28320224 FN-235 Single Base Substitution C-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-147.SNP.8:28323750 chr08:028323750 0 W/28323750-28323750 FN-147 Single Base Substitution A-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2648-S.SNP.8:28324506 chr08:028324506 0 W/28324506-28324506 FN2648-S SNP T -> A AC=1;AN=200;BQB=0.308594;DP=4383;DP4=1960,2267,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.92386e-11;MQSB=0.999706;RPB=0.658473;SGB=-62.495;VDB=0.116552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.8:28324760 chr08:028324760 0 W/28324760-28324760 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.897093;DP=3694;DP4=1765,1725,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.75681e-14;MQSB=0.990861;RPB=0.925738;SGB=68.91;VDB=0.199794;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.8:28325641 chr08:028325641 0 W/28325641-28325641 FN-169 Single Base Substitution A-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN933-S.SNP.8:28326528 chr08:028326528 0 W/28326528-28326528 FN933-S Single Base Substitution T-A INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN460-S.SNP.8:28330048 chr08:028330048 0 W/28330048-28330048 FN460-S Single Base Substitution C-T INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN654-S.SNP.8:28332085 chr08:028332085 0 W/28332085-28332085 FN654-S Single Base Substitution C-G INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN479-S.SNP.8:28332629 chr08:028332629 0 W/28332629-28332629 FN479-S Single Base Substitution G-A INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN3710-S.SNP.8:28334585 chr08:028334585 0 W/28334585-28334585 FN3710-S SNP A -> G AC=2;AN=190;BQB=0.869101;DP=2432;DP4=1101,1234,5,13;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0538651;MQB=0.657922;MQSB=5.18507e-13;RPB=0.883141;SGB=76.4186;VDB=0.886471;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.8:28344444 chr08:028344444 0 W/28344444-28344444 FN712-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN449-S.SNP.8:28349749 chr08:028349749 0 W/28349749-28349749 FN449-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os08g45160 TENA/THI-4 family protein, putative, expressed SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3343-S.SNP.8:28357519 chr08:028357519 0 W/28357519-28357519 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.996448;DP=3337;DP4=1393,1752,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.03963e-06;MQSB=0.904016;RPB=0.994125;SGB=44.2207;VDB=0.917733;EFF=INTRON(MODIFIER||||433|LOC_Os08g45170|protein_coding|CODING|LOC_Os08g45170.1|2|1),INTRON(MODIFIER||||261|LOC_Os08g45170|protein_coding|CODING|LOC_Os08g45170.2|2|1),INTRON(MODIFIER||||234|LOC_Os08g45170|protein_coding|CODING|LOC_Os08g45170.3|2|1) FN3342-S.SNP.8:28366714 chr08:028366714 0 W/28366714-28366714 FN3342-S SNP T -> C AC=1;AN=184;BQB=0.996097;DP=2784;DP4=1432,1251,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.91958e-07;MQSB=0.694117;RPB=0.765984;SGB=57.786;VDB=0.736899;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.8:28403398 chr08:028403398 0 W/28403398-28403398 FN-274 Single Base Substitution T-A INTRON HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN560-S.SNP.8:28410037 chr08:028410037 0 W/28410037-28410037 FN560-S Single Base Substitution A-G INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN560-S.SNP.8:28410041 chr08:028410041 0 W/28410041-28410041 FN560-S Single Base Substitution G-T INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3982-S.SNP.8:28414521 chr08:028414521 0 W/28414521-28414521 FN3982-S SNP C -> T AC=1;AN=168;BQB=0.980058;DP=2277;DP4=956,1203,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.83536e-08;MQSB=0.9638;RPB=0.863479;SGB=52.1728;VDB=0.919572;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.8:28427156 chr08:028427156 0 W/28427156-28427156 FN955-S Single Base Substitution C-A INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-206.SNP.8:28427283 chr08:028427283 0 W/28427283-28427283 FN-206 Single Base Substitution C-T INTERGENIC HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2301.SNP.8:28427283 chr08:028427283 0 W/28427283-28427283 FN2301 SNP C -> T AC=1;AN=192;BQB=0.00498855;DP=6373;DP4=3528,2050,16,5;HOB=5.42535e-05;ICB=0.000109072;MQ=22;MQ0F=0.259219;MQB=0.906201;MQSB=0.00043848;RPB=0.823547;SGB=-139.743;VDB=0.982208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3466-S.SNP.8:28427283 chr08:028427283 0 W/28427283-28427283 FN3466-S SNP C -> T AC=1;AN=184;BQB=0.894972;DP=5344;DP4=3173,1590,21,10;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.317927;MQB=0.0493968;MQSB=3.4118e-34;RPB=0.769671;SGB=28.1074;VDB=0.134494;EFF=INTERGENIC(MODIFIER||||||||||1) FN4134-S.SNP.8:28427283 chr08:028427283 0 W/28427283-28427283 FN4134-S SNP C -> T AC=1;AN=182;BQB=0.295106;DP=4836;DP4=2981,1360,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=22;MQ0F=0.314723;MQB=0.527917;MQSB=8.57242e-33;RPB=0.888706;SGB=3.63874;VDB=0.913309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.8:28429988 chr08:028429988 0 W/28429988-28429988 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.461044;DP=2916;DP4=1491,1232,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00646491;MQSB=0.765709;RPB=0.977027;SGB=10.6662;VDB=0.324775;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.8:28430392 chr08:028430392 0 W/28430392-28430392 FN_N1-26-1 Single Base Substitution C-T Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN3341-S.SNP.8:28436073 chr08:028436073 0 W/28436073-28436073 FN3341-S SNP T -> A AC=2;AN=184;BQB=0.245313;DP=3715;DP4=1263,2029,22,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000269179;MQB=9.15838e-14;MQSB=0.927159;RPB=0.34557;SGB=-184.256;VDB=0.00254891;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.9:39054 chr09:000039054 0 W/39054-39054 FN_769-4-1 Single Base Substitution T-C HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2113-S.SNP.9:42834 chr09:000042834 0 W/42834-42834 FN2113-S SNP T -> A AC=2;AN=168;BQB=0.00329207;DP=3239;DP4=1580,1592,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.3765e-21;MQSB=0.998764;RPB=0.525171;SGB=38.5303;VDB=0.864143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.9:42844 chr09:000042844 0 W/42844-42844 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.656419;DP=4628;DP4=2182,2172,22,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.03826e-21;MQSB=0.980999;RPB=0.987848;SGB=83.8419;VDB=0.792783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.9:42844 chr09:000042844 0 W/42844-42844 FN2572-S Single Base Substitution C-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2140-S.SNP.9:47341 chr09:000047341 0 W/47341-47341 FN2140-S SNP C -> T AC=1;AN=168;BQB=0.103156;DP=3465;DP4=1633,1771,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.80137e-10;MQSB=0.999374;RPB=0.844045;SGB=-66.4989;VDB=0.953188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.9:50708 chr09:000050708 0 W/50708-50708 FN-198 Single Base Substitution G-A INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN494-S.SNP.9:59499 chr09:000059499 0 W/59499-59499 FN494-S Single Base Substitution G-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN1373-S.SNP.9:61921 chr09:000061921 0 W/61921-61921 FN1373-S Single Base Substitution G-A INTERGENIC Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2310.SNP.9:62718 chr09:000062718 0 W/62718-62718 FN2310 SNP T -> C AC=1;AN=192;BQB=0.872679;DP=5036;DP4=2421,2134,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.93389e-16;MQSB=0.28045;RPB=0.579946;SGB=-6.8678;VDB=0.892125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.9:66545 chr09:000066545 0 W/66545-66545 FN2298 SNP C -> T AC=2;AN=192;BQB=0.88432;DP=5207;DP4=2525,2330,23,25;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.00441713;MQB=0.0172945;MQSB=0.980971;RPB=0.612676;SGB=3.29047;VDB=0.1419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.9:68422 chr09:000068422 0 W/68422-68422 FN3807-S SNP C -> T AC=2;AN=190;BQB=0.823411;DP=2784;DP4=1270,1415,11,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.30862e-17;MQSB=0.607794;RPB=0.467836;SGB=140.173;VDB=0.963154;EFF=INTRON(MODIFIER||||207|LOC_Os09g01030|protein_coding|CODING|LOC_Os09g01030.1|1|1) FN2609-S.SNP.9:71252 chr09:000071252 0 W/71252-71252 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.193631;DP=4032;DP4=1845,1939,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.42646e-14;MQSB=0.992971;RPB=0.40947;SGB=97.671;VDB=0.648312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A82V|207|LOC_Os09g01030|protein_coding|CODING|LOC_Os09g01030.1|2|1) FN-205.SNP.9:71836 chr09:000071836 0 W/71836-71836 FN-205 Single Base Substitution G-A INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN474-S.SNP.9:71858 chr09:000071858 0 W/71858-71858 FN474-S Single Base Substitution C-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN3639-S.SNP.9:86212 chr09:000086212 0 W/86212-86212 FN3639-S SNP C -> A AC=1;AN=190;BQB=0.993317;DP=2445;DP4=1085,1290,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0294479;MQB=0.0125122;MQSB=0.0098486;RPB=0.883839;SGB=18.3316;VDB=0.419626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aAc|T78N|1612|LOC_Os09g01060|protein_coding|CODING|LOC_Os09g01060.1|2|1) FN1514-S.SNP.9:88258 chr09:000088258 0 W/88258-88258 FN1514-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g01060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2572-S.SNP.9:91617 chr09:000091617 0 W/91617-91617 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.7371;DP=4323;DP4=2009,2066,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.127689;MQB=0.351681;MQSB=0.000746294;RPB=0.781082;SGB=76.1002;VDB=0.516733;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1611|1612|LOC_Os09g01060|protein_coding|CODING|LOC_Os09g01060.1|6|1) FN2499.SNP.9:91744 chr09:000091744 0 W/91744-91744 FN2499 SNP A -> C AC=1;AN=200;BQB=0.742343;DP=5571;DP4=2409,2586,7,14;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.323281;MQB=0.452132;MQSB=0;RPB=0.993167;SGB=-36.8949;VDB=0.306469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.9:103599 chr09:000103599 0 W/103599-103599 FN3462-S SNP C -> T AC=1;AN=184;BQB=0.921885;DP=3919;DP4=1659,2174,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50538e-08;MQSB=0.998051;RPB=0.0253521;SGB=53.2642;VDB=0.100008;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E61|142|LOC_Os09g01090|protein_coding|CODING|LOC_Os09g01090.1|1|1) FN4039-S.SNP.9:110515 chr09:000110515 0 W/110515-110515 FN4039-S SNP A -> C AC=1;AN=168;BQB=0.720834;DP=2702;DP4=1162,1289,6,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00222058;MQB=4.4093e-13;MQSB=0.760633;RPB=0.543048;SGB=-13.2184;VDB=0.693044;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.9:110516 chr09:000110516 0 W/110516-110516 FN4039-S SNP G -> T AC=1;AN=168;BQB=0.104067;DP=2699;DP4=1300,1305,4,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00222305;MQB=1.95636e-08;MQSB=0.798137;RPB=0.471413;SGB=-14.5109;VDB=0.561811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.9:111185 chr09:000111185 0 W/111185-111185 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.904094;DP=2513;DP4=1271,1102,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0636689;MQB=0.734683;MQSB=0.604098;RPB=0.856504;SGB=39.699;VDB=0.953851;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.9:130926 chr09:000130926 0 W/130926-130926 FN2768-S SNP G -> A AC=1;AN=198;BQB=0.821745;DP=6819;DP4=3961,2480,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0611527;MQB=0.267638;MQSB=2.90281e-38;RPB=0.436573;SGB=40.149;VDB=0.987455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.9:136065 chr09:000136065 0 W/136065-136065 FN-362 Single Base Substitution T-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3756-S.SNP.9:137307 chr09:000137307 0 W/137307-137307 FN3756-S SNP C -> T AC=2;AN=190;BQB=0.981222;DP=4299;DP4=2260,1793,31,19;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0134915;MQB=0.198544;MQSB=1.42882e-10;RPB=0.999002;SGB=167.594;VDB=0.861342;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.9:137552 chr09:000137552 0 W/137552-137552 FN591-S Single Base Substitution G-A INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2263-S.SNP.9:149062 chr09:000149062 0 W/149062-149062 FN2263-S SNP G -> C AC=1;AN=190;BQB=0.0487694;DP=5235;DP4=2250,2705,8,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.56944e-13;MQSB=0.807864;RPB=0.433588;SGB=46.6446;VDB=0.390728;EFF=INTRON(MODIFIER||||397|LOC_Os09g01140|protein_coding|CODING|LOC_Os09g01140.1|6|1) FN1321-S.SNP.9:188362 chr09:000188362 0 W/188362-188362 FN1321-S Single Base Substitution T-A INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2255-S.SNP.9:193843 chr09:000193843 0 W/193843-193843 FN2255-S SNP G -> A AC=1;AN=190;BQB=0.962272;DP=4797;DP4=2608,1856,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0325203;MQB=0.0470363;MQSB=5.91628e-42;RPB=0.930117;SGB=53.8699;VDB=0.525684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V292I|1335|LOC_Os09g01230|protein_coding|CODING|LOC_Os09g01230.1|1|1) FN2469.SNP.9:195776 chr09:000195776 0 W/195776-195776 FN2469 SNP A -> T AC=1;AN=200;BQB=0.653884;DP=4892;DP4=2293,2264,7,7;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.114677;MQB=0.877225;MQSB=3.38647e-24;RPB=0.931665;SGB=21.6694;VDB=0.736899;EFF=INTRON(MODIFIER||||1335|LOC_Os09g01230|protein_coding|CODING|LOC_Os09g01230.1|3|1) FN3288-S.SNP.9:203376 chr09:000203376 0 W/203376-203376 FN3288-S SNP C -> A AC=1;AN=184;BQB=0.946413;DP=3838;DP4=1787,1924,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.291037;MQB=0.755675;MQSB=0;RPB=0.923559;SGB=39.699;VDB=0.456924;EFF=INTERGENIC(MODIFIER||||||||||1) FN-173.SNP.9:206254 chr09:000206254 0 W/206254-206254 FN-173 Single Base Substitution G-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2217-S.SNP.9:232593 chr09:000232593 0 W/232593-232593 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.844571;DP=5565;DP4=2368,2821,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.04708;MQB=0.0296864;MQSB=7.43133e-25;RPB=0.326027;SGB=36.1006;VDB=0.0519818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P797L|1795|LOC_Os09g01270|protein_coding|CODING|LOC_Os09g01270.1|4|1) FN1492-S.SNP.9:239871 chr09:000239871 0 W/239871-239871 FN1492-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2715-S.SNP.9:245584 chr09:000245584 0 W/245584-245584 FN2715-S SNP T -> G AC=2;AN=200;BQB=0.843776;DP=4986;DP4=2439,2252,22,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.63272e-27;MQSB=0.985416;RPB=0.46871;SGB=115.456;VDB=0.134327;EFF=UTR_3_PRIME(MODIFIER||1312||441|LOC_Os09g01290|protein_coding|CODING|LOC_Os09g01290.2|3|1),INTRON(MODIFIER||||452|LOC_Os09g01290|protein_coding|CODING|LOC_Os09g01290.1|3|1) FN2645-S.SNP.9:245707 chr09:000245707 0 W/245707-245707 FN2645-S SNP A -> C AC=1;AN=200;BQB=0.878595;DP=4932;DP4=2266,2437,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14544e-10;MQSB=0.650239;RPB=0.185822;SGB=61.9006;VDB=0.802164;EFF=UTR_3_PRIME(MODIFIER||1189||441|LOC_Os09g01290|protein_coding|CODING|LOC_Os09g01290.2|3|1),INTRON(MODIFIER||||452|LOC_Os09g01290|protein_coding|CODING|LOC_Os09g01290.1|3|1) FN1064-S.SNP.9:248979 chr09:000248979 0 W/248979-248979 FN1064-S Single Base Substitution G-A INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2429.SNP.9:251041 chr09:000251041 0 W/251041-251041 FN2429 SNP G -> T AC=1;AN=200;BQB=0.54791;DP=4925;DP4=2356,2218,19,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.23693e-15;MQSB=0.672711;RPB=0.705753;SGB=90.7419;VDB=0.514643;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.9:261368 chr09:000261368 0 W/261368-261368 FN-409 Single Base Substitution G-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3524-S.SNP.9:267776 chr09:000267776 0 W/267776-267776 FN3524-S SNP A -> G AC=1;AN=188;BQB=0.91389;DP=2814;DP4=1314,1429,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000355366;MQB=0.000222163;MQSB=0.892192;RPB=0.90443;SGB=30.8063;VDB=0.452509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.9:271479 chr09:000271479 0 W/271479-271479 FN3376-S SNP G -> C AC=2;AN=184;BQB=0.912736;DP=2917;DP4=1277,1448,27,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46674e-22;MQSB=0.673065;RPB=0.862148;SGB=134.358;VDB=0.247596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.9:273161 chr09:000273161 0 W/273161-273161 FN3449-S SNP A -> C AC=2;AN=184;BQB=0.975249;DP=3422;DP4=1595,1700,21,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.89873e-26;MQSB=0.98129;RPB=0.849177;SGB=197.961;VDB=0.435788;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D187A|1846|LOC_Os09g01340|protein_coding|CODING|LOC_Os09g01340.1|1|1) FN1350-S.SNP.9:277520 chr09:000277520 0 W/277520-277520 FN1350-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN3452-S.SNP.9:282426 chr09:000282426 0 W/282426-282426 FN3452-S SNP G -> C AC=1;AN=184;BQB=0.319623;DP=3186;DP4=1505,1565,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.32056e-09;MQSB=0.99714;RPB=0.61997;SGB=30.8405;VDB=0.974344;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.9:284174 chr09:000284174 0 W/284174-284174 FN1224-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3844-S.SNP.9:287140 chr09:000287140 0 W/287140-287140 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.719085;DP=2521;DP4=1090,1345,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68274e-05;MQSB=0.865108;RPB=0.722579;SGB=13.4442;VDB=0.100284;EFF=INTRON(MODIFIER||||1099|LOC_Os09g01360|protein_coding|CODING|LOC_Os09g01360.1|10|1) FN-292.SNP.9:317516 chr09:000317516 0 W/317516-317516 FN-292 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g01400 retrotransposon protein, putative, unclassified SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-292.SNP.9:317518 chr09:000317518 0 W/317518-317518 FN-292 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g01400 retrotransposon protein, putative, unclassified SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-203.SNP.9:319935 chr09:000319935 0 W/319935-319935 FN-203 Single Base Substitution C-T INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN1338-S.SNP.9:324318 chr09:000324318 0 W/324318-324318 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4188-S.SNP.9:327373 chr09:000327373 0 W/327373-327373 FN4188-S SNP T -> G AC=1;AN=170;BQB=0.848608;DP=2525;DP4=1173,1178,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0158416;MQB=0.00650652;MQSB=7.37729e-08;RPB=0.948512;SGB=29.6545;VDB=0.836629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaG|N326K|981|LOC_Os09g01430|protein_coding|CODING|LOC_Os09g01430.1|2|1) FN3711-S.SNP.9:330688 chr09:000330688 0 W/330688-330688 FN3711-S SNP G -> A AC=1;AN=190;BQB=0.981711;DP=2868;DP4=1234,1524,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00941423;MQB=7.2805e-07;MQSB=0.198684;RPB=0.836995;SGB=68.0854;VDB=0.744842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.9:333551 chr09:000333551 0 W/333551-333551 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.800857;DP=3600;DP4=1733,1629,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83332e-06;MQSB=0.996227;RPB=0.69737;SGB=42.7914;VDB=0.0188569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.9:343189 chr09:000343189 0 W/343189-343189 FN1297-S Single Base Substitution T-G INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN405-S.SNP.9:347565 chr09:000347565 0 W/347565-347565 FN405-S Single Base Substitution T-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN405-S.SNP.9:347566 chr09:000347566 0 W/347566-347566 FN405-S Single Base Substitution C-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN405-S.SNP.9:347567 chr09:000347567 0 W/347567-347567 FN405-S Single Base Substitution G-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN3698-S.SNP.9:347699 chr09:000347699 0 W/347699-347699 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.965036;DP=3619;DP4=1907,1552,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11881e-10;MQSB=0.995342;RPB=0.831614;SGB=85.5263;VDB=0.854934;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.9:349097 chr09:000349097 0 W/349097-349097 FN-350 Single Base Substitution T-A INTRON HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN747-S.SNP.9:351587 chr09:000351587 0 W/351587-351587 FN747-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g01480 retrotransposon protein, putative, unclassified, expressed SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3520-S.SNP.9:357770 chr09:000357770 0 W/357770-357770 FN3520-S SNP G -> C AC=1;AN=188;BQB=0.33373;DP=4300;DP4=1742,2375,19,90;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0623256;MQB=3.98235e-32;MQSB=0.161504;RPB=1.12322e-24;SGB=-2623.68;VDB=8.79543e-20;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.9:364059 chr09:000364059 0 W/364059-364059 FN-250 Single Base Substitution C-T INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1300-S.SNP.9:364078 chr09:000364078 0 W/364078-364078 FN1300-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2785-S.SNP.9:365120 chr09:000365120 0 W/365120-365120 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.920113;DP=4515;DP4=2292,1979,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.64406e-14;MQSB=0.0915099;RPB=0.691971;SGB=52.7004;VDB=0.985654;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.9:367106 chr09:000367106 0 W/367106-367106 FN939-S Single Base Substitution T-A INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2333.SNP.9:375587 chr09:000375587 0 W/375587-375587 FN2333 SNP C -> A AC=1;AN=192;BQB=0.845372;DP=5055;DP4=2102,2639,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00375865;MQB=2.07232e-05;MQSB=0.138166;RPB=0.897836;SGB=-15.333;VDB=0.205645;EFF=INTRON(MODIFIER||||268|LOC_Os09g01520|protein_coding|CODING|LOC_Os09g01520.1|4|1) FN1184-S.SNP.9:380418 chr09:000380418 0 W/380418-380418 FN1184-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2237-S.SNP.9:383901 chr09:000383901 0 W/383901-383901 FN2237-S SNP G -> A AC=1;AN=190;BQB=0.775684;DP=5621;DP4=2773,2440,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.241416;MQB=0.417045;MQSB=1.25781e-05;RPB=0.20154;SGB=-2.10437;VDB=0.0270917;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1364|1975|LOC_Os09g01530|protein_coding|CODING|LOC_Os09g01530.1|3|1) FN953-S.SNP.9:384888 chr09:000384888 0 W/384888-384888 FN953-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN953-S.SNP.9:384889 chr09:000384889 0 W/384889-384889 FN953-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g01530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2606-S.SNP.9:388929 chr09:000388929 0 W/388929-388929 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.940223;DP=4391;DP4=2117,2075,11,2;HOB=5.10152e-05;ICB=0.000102546;MQ=13;MQ0F=0.532453;MQB=0.0445596;MQSB=0;RPB=0.482754;SGB=54.144;VDB=0.889027;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G29|860|LOC_Os09g01540|protein_coding|CODING|LOC_Os09g01540.1|1|1) FN2492.SNP.9:390643 chr09:000390643 0 W/390643-390643 FN2492 SNP G -> A AC=1;AN=200;BQB=0.0220881;DP=3487;DP4=1723,1414,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.57043e-05;MQSB=0.595791;RPB=0.648331;SGB=16.4591;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.9:391139 chr09:000391139 0 W/391139-391139 FN2112-S SNP T -> C AC=2;AN=168;BQB=0.559273;DP=2713;DP4=1182,1472,24,18;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.50714e-12;MQSB=0.0285909;RPB=0.447704;SGB=-97.8826;VDB=0.655283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.9:393714 chr09:000393714 0 W/393714-393714 FN2259-S SNP C -> T AC=1;AN=190;BQB=0.0115342;DP=9321;DP4=4967,3732,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000107285;MQB=7.71852e-07;MQSB=0.84902;RPB=0.992642;SGB=67.3108;VDB=0.526185;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R309|833|LOC_Os09g01550|protein_coding|CODING|LOC_Os09g01550.1|2|1) FN977-S.SNP.9:394546 chr09:000394546 0 W/394546-394546 FN977-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g01550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN2272-S.SNP.9:395704 chr09:000395704 0 W/395704-395704 FN2272-S SNP G -> A AC=1;AN=190;BQB=0.389854;DP=7739;DP4=4180,3097,25,12;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0731361;MQB=0.000114371;MQSB=2.18232e-06;RPB=0.877921;SGB=-86.3494;VDB=0.40162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.9:395704 chr09:000395704 0 W/395704-395704 FN3994-S SNP G -> A AC=1;AN=168;BQB=0.996026;DP=4074;DP4=2024,1879,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0918017;MQB=0.0336995;MQSB=1.18039e-07;RPB=0.894291;SGB=5.62151;VDB=0.207373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.9:397612 chr09:000397612 0 W/397612-397612 FN2696-S SNP A -> G AC=1;AN=200;BQB=0.121061;DP=11122;DP4=4782,5723,28,25;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0107894;MQB=4.1278e-05;MQSB=0;RPB=0.71201;SGB=-164.73;VDB=0.715442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L1413P|1944|LOC_Os09g01560|protein_coding|CODING|LOC_Os09g01560.1|3|1) FN3844-S.SNP.9:399320 chr09:000399320 0 W/399320-399320 FN3844-S SNP C -> T AC=1;AN=190;BQB=0.938246;DP=4451;DP4=1908,2403,20,10;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.158841;MQB=0.761032;MQSB=1.9362e-08;RPB=0.701961;SGB=96.5165;VDB=0.0099365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E920K|1944|LOC_Os09g01560|protein_coding|CODING|LOC_Os09g01560.1|1|1) FN497-S.SNP.9:400937 chr09:000400937 0 W/400937-400937 FN497-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g01560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN904-S.SNP.9:402397 chr09:000402397 0 W/402397-402397 FN904-S Single Base Substitution A-G INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN-171.SNP.9:403565 chr09:000403565 0 W/403565-403565 FN-171 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g01570 retrotransposon protein, putative, Ty1-copia subclass SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1355-S.SNP.9:407376 chr09:000407376 0 W/407376-407376 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN591-S.SNP.9:415721 chr09:000415721 0 W/415721-415721 FN591-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2677-S.SNP.9:437128 chr09:000437128 0 W/437128-437128 FN2677-S SNP C -> G AC=1;AN=200;BQB=0.485769;DP=4936;DP4=2376,2319,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.90923e-16;MQSB=0.881874;RPB=0.987943;SGB=83.5316;VDB=0.811185;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:437638 chr09:000437638 0 W/437638-437638 FN1097-S Single Base Substitution A-G INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN998-S.SNP.9:452337 chr09:000452337 0 W/452337-452337 FN998-S Single Base Substitution G-A INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3484-S.SNP.9:456334 chr09:000456334 0 W/456334-456334 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.853501;DP=3242;DP4=1868,1200,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.12479e-12;MQSB=0.99118;RPB=0.926039;SGB=11.3677;VDB=0.74324;EFF=UTR_5_PRIME(MODIFIER||32||377|LOC_Os09g01640|protein_coding|CODING|LOC_Os09g01640.1|1|1) FN3484-S.SNP.9:456335 chr09:000456335 0 W/456335-456335 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.187526;DP=3258;DP4=1960,1230,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.66086e-11;MQSB=0.962603;RPB=0.610849;SGB=66.8296;VDB=0.634679;EFF=UTR_5_PRIME(MODIFIER||31||377|LOC_Os09g01640|protein_coding|CODING|LOC_Os09g01640.1|1|1) FN3484-S.SNP.9:456339 chr09:000456339 0 W/456339-456339 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.920457;DP=3206;DP4=1876,1232,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.185e-11;MQSB=0.937792;RPB=0.833372;SGB=71.3514;VDB=0.540352;EFF=UTR_5_PRIME(MODIFIER||27||377|LOC_Os09g01640|protein_coding|CODING|LOC_Os09g01640.1|1|1) FN579-S.SNP.9:461048 chr09:000461048 0 W/461048-461048 FN579-S Single Base Substitution G-A INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2674-S.SNP.9:478435 chr09:000478435 0 W/478435-478435 FN2674-S SNP G -> T AC=1;AN=200;BQB=0.373386;DP=4811;DP4=2491,2025,23,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207857;MQB=4.21641e-16;MQSB=0.0336553;RPB=0.215753;SGB=60.747;VDB=0.587627;EFF=INTRON(MODIFIER||||416|LOC_Os09g01670|protein_coding|CODING|LOC_Os09g01670.1|1|1) FN2255-S.SNP.9:489466 chr09:000489466 0 W/489466-489466 FN2255-S SNP G -> A AC=1;AN=190;BQB=0.893813;DP=4898;DP4=2448,2099,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63911e-10;MQSB=0.99419;RPB=0.611776;SGB=57.4238;VDB=0.641995;EFF=INTRON(MODIFIER||||283|LOC_Os09g01680|protein_coding|CODING|LOC_Os09g01680.1|5|1),INTRON(MODIFIER||||184|LOC_Os09g01680|protein_coding|CODING|LOC_Os09g01680.2|5|1),INTRON(MODIFIER||||256|LOC_Os09g01680|protein_coding|CODING|LOC_Os09g01680.3|5|1) FN1750-S.SNP.9:492363 chr09:000492363 0 W/492363-492363 FN1750-S SNP C -> T AC=1;AN=188;BQB=0.689306;DP=3441;DP4=1741,1658,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.04981e-10;MQSB=0.944796;RPB=0.952278;SGB=11.7114;VDB=0.324826;EFF=INTRON(MODIFIER||||89|LOC_Os09g01690|protein_coding|CODING|LOC_Os09g01690.2|2|1),INTRON(MODIFIER||||175|LOC_Os09g01690|protein_coding|CODING|LOC_Os09g01690.1|2|1) FN2454.SNP.9:504674 chr09:000504674 0 W/504674-504674 FN2454 SNP G -> A AC=1;AN=200;BQB=0.96994;DP=4065;DP4=2135,1725,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000246002;MQB=0.000255918;MQSB=0.00252478;RPB=0.997574;SGB=29.4541;VDB=0.728489;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.9:508788 chr09:000508788 0 W/508788-508788 FN2671-S SNP C -> T AC=1;AN=200;BQB=0.981693;DP=5829;DP4=2877,2633,12,9;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.450335;MQB=0.656869;MQSB=0;RPB=0.996753;SGB=39.9056;VDB=0.923053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.9:511591 chr09:000511591 0 W/511591-511591 FN1214-S Single Base Substitution G-C INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2419.SNP.9:519234 chr09:000519234 0 W/519234-519234 FN2419 SNP A -> T AC=1;AN=200;BQB=0.914774;DP=4552;DP4=2201,2036,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.48484e-10;MQSB=0.18677;RPB=0.0318588;SGB=61.9006;VDB=0.0788989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1534-S.SNP.9:524134 chr09:000524134 0 W/524134-524134 FN1534-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1523-S.SNP.9:524177 chr09:000524177 0 W/524177-524177 FN1523-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g01750 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1523-S.SNP.9:524179 chr09:000524179 0 W/524179-524179 FN1523-S Single Base Substitution G-T STOP_GAINED HET LOC_Os09g01750 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN1523-S.SNP.9:524180 chr09:000524180 0 W/524180-524180 FN1523-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g01750 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN3404-S.SNP.9:528563 chr09:000528563 0 W/528563-528563 FN3404-S SNP G -> C AC=1;AN=184;BQB=0.92435;DP=2694;DP4=1269,1343,2,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00222717;MQB=0.00192023;MQSB=0.431544;RPB=0.690659;SGB=26.1347;VDB=0.874061;EFF=INTRON(MODIFIER||||513|LOC_Os09g01760|protein_coding|CODING|LOC_Os09g01760.1|3|1) FN2492.SNP.9:529484 chr09:000529484 0 W/529484-529484 FN2492 SNP C -> G AC=2;AN=200;BQB=0.217338;DP=4323;DP4=2016,2045,13,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00231321;MQB=2.03792e-20;MQSB=0.999992;RPB=0.344916;SGB=130.399;VDB=0.642353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V73L|513|LOC_Os09g01760|protein_coding|CODING|LOC_Os09g01760.1|2|1) FN2655-S.SNP.9:538073 chr09:000538073 0 W/538073-538073 FN2655-S SNP T -> A AC=1;AN=200;BQB=0.614915;DP=4578;DP4=1937,2354,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34515e-15;MQSB=0.955931;RPB=0.937788;SGB=97.9523;VDB=0.843345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.9:541452 chr09:000541452 0 W/541452-541452 FN3826-S SNP A -> T AC=1;AN=190;BQB=0.962703;DP=2727;DP4=1191,1099,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=7.35356e-05;MQSB=0.990226;RPB=0.757298;SGB=21.8853;VDB=0.865278;EFF=INTRON(MODIFIER||||648|LOC_Os09g01780|protein_coding|CODING|LOC_Os09g01780.1|2|1) FN4240-S.SNP.9:545767 chr09:000545767 0 W/545767-545767 FN4240-S SNP T -> G AC=1;AN=170;BQB=0.972571;DP=2341;DP4=1214,1067,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.09118e-08;MQSB=0.729186;RPB=0.793461;SGB=47.8722;VDB=0.899975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aCt|N265T|483|LOC_Os09g01790|protein_coding|CODING|LOC_Os09g01790.1|6|1) FN2754-S.SNP.9:546360 chr09:000546360 0 W/546360-546360 FN2754-S SNP A -> T AC=1;AN=200;BQB=0.308454;DP=5210;DP4=2280,2763,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.31673e-11;MQSB=0.982295;RPB=0.846534;SGB=72.6852;VDB=0.793201;EFF=INTRON(MODIFIER||||483|LOC_Os09g01790|protein_coding|CODING|LOC_Os09g01790.1|4|1) FN_807-3-1.SNP.9:550809 chr09:000550809 0 W/550809-550809 FN_807-3-1 Single Base Substitution G-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2676-S.SNP.9:562969 chr09:000562969 0 W/562969-562969 FN2676-S SNP T -> C AC=1;AN=200;BQB=0.444132;DP=5371;DP4=2639,2426,14,13;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.134239;MQB=0.976303;MQSB=1.55317e-35;RPB=0.831809;SGB=55.5366;VDB=0.85833;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S750|826|LOC_Os09g01810|protein_coding|CODING|LOC_Os09g01810.1|7|1) FN3473-S.SNP.9:587172 chr09:000587172 0 W/587172-587172 FN3473-S SNP G -> T AC=1;AN=184;BQB=0.755193;DP=3934;DP4=1793,2066,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00940519;MQB=2.33838e-08;MQSB=1.13309e-06;RPB=0.931885;SGB=43.4494;VDB=0.177481;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I135|978|LOC_Os09g01850|protein_coding|CODING|LOC_Os09g01850.1|1|1) FN3473-S.SNP.9:587176 chr09:000587176 0 W/587176-587176 FN3473-S SNP A -> T AC=1;AN=184;BQB=0.989168;DP=3882;DP4=1748,2002,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00798557;MQB=1.28741e-07;MQSB=2.18716e-05;RPB=0.786962;SGB=84.9167;VDB=0.091492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V134D|978|LOC_Os09g01850|protein_coding|CODING|LOC_Os09g01850.1|1|1) FN1625-S.SNP.9:589319 chr09:000589319 0 W/589319-589319 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:589319 chr09:000589319 0 W/589319-589319 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.0778006;DP=1622;DP4=1057,531,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.72044e-06;MQSB=0.895781;RPB=0.820911;SGB=43.0708;VDB=0.850592;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.9:594790 chr09:000594790 0 W/594790-594790 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2533-S.SNP.9:594806 chr09:000594806 0 W/594806-594806 FN2533-S SNP G -> A AC=2;AN=198;BQB=0.467153;DP=3241;DP4=1907,1113,9,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.6735e-09;MQSB=0.957902;RPB=0.175714;SGB=47.3393;VDB=0.430775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.9:595997 chr09:000595997 0 W/595997-595997 FN2533-S SNP C -> A AC=2;AN=198;BQB=0.425116;DP=4149;DP4=1864,2011,15,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.61498e-15;MQSB=0.875693;RPB=0.972268;SGB=55.2955;VDB=0.236443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.9:598369 chr09:000598369 0 W/598369-598369 FN3399-S SNP A -> G AC=1;AN=184;BQB=0.997371;DP=2496;DP4=1261,1169,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.4684e-06;MQSB=0.983812;RPB=0.508502;SGB=35.1773;VDB=0.283505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.9:605984 chr09:000605984 0 W/605984-605984 FN3407-S SNP G -> A AC=2;AN=184;BQB=0.959188;DP=2741;DP4=1288,1378,9,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00036483;MQB=1.56629e-06;MQSB=0.998438;RPB=0.757034;SGB=32.2261;VDB=0.629855;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H673Y|835|LOC_Os09g01900|protein_coding|CODING|LOC_Os09g01900.1|7|1) FN681-S.SNP.9:606901 chr09:000606901 0 W/606901-606901 FN681-S Single Base Substitution G-T INTRON HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3939-S.SNP.9:607910 chr09:000607910 0 W/607910-607910 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.993029;DP=2277;DP4=1051,1166,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.0017567;MQB=3.71439e-07;MQSB=0.949067;RPB=0.770772;SGB=47.0672;VDB=0.535431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D162N|835|LOC_Os09g01900|protein_coding|CODING|LOC_Os09g01900.1|3|1) FN3939-S.SNP.9:607911 chr09:000607911 0 W/607911-607911 FN3939-S SNP C -> A AC=1;AN=158;BQB=0.887228;DP=2283;DP4=1017,1159,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00131406;MQB=1.16696e-07;MQSB=0.967928;RPB=0.918232;SGB=34.0735;VDB=0.681619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W161C|835|LOC_Os09g01900|protein_coding|CODING|LOC_Os09g01900.1|3|1) FN3557-S.SNP.9:627181 chr09:000627181 0 W/627181-627181 FN3557-S SNP C -> A AC=1;AN=188;BQB=0.863386;DP=2762;DP4=1603,1089,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.86003e-11;MQSB=0.890166;RPB=0.403711;SGB=71.6954;VDB=0.506803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.9:631414 chr09:000631414 0 W/631414-631414 FN1192-S Single Base Substitution T-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN2295.SNP.9:632101 chr09:000632101 0 W/632101-632101 FN2295 SNP T -> C AC=1;AN=192;BQB=0.952881;DP=5369;DP4=2546,2495,12,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95051e-15;MQSB=0.977084;RPB=0.673031;SGB=93.2452;VDB=0.511704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.9:639284 chr09:000639284 0 W/639284-639284 FN3535-S SNP C -> A AC=1;AN=188;BQB=0.982022;DP=2588;DP4=1259,1239,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.1182e-05;MQSB=0.998922;RPB=0.879588;SGB=26.2637;VDB=0.700305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.9:641106 chr09:000641106 0 W/641106-641106 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.891637;DP=4389;DP4=2088,2083,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.1736e-11;MQSB=0.961389;RPB=0.990686;SGB=86.5007;VDB=0.198702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.9:641127 chr09:000641127 0 W/641127-641127 FN2792-S SNP G -> C AC=1;AN=198;BQB=0.185055;DP=3497;DP4=1542,1498,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.29588e-11;MQSB=0.790371;RPB=0.816452;SGB=86.3098;VDB=0.404126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.9:643220 chr09:000643220 0 W/643220-643220 FN3495-S SNP C -> A AC=1;AN=188;BQB=0.9769;DP=2678;DP4=1185,1421,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.59108e-07;MQSB=0.575887;RPB=0.977209;SGB=53.5223;VDB=0.293274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.9:644892 chr09:000644892 0 W/644892-644892 FN2666-S SNP A -> G AC=1;AN=200;BQB=0.995973;DP=4109;DP4=1858,1947,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12068e-12;MQSB=0.597262;RPB=0.353517;SGB=47.7211;VDB=0.565803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.9:645194 chr09:000645194 0 W/645194-645194 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.977475;DP=2645;DP4=1138,1457,15,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.22823e-13;MQSB=0.536712;RPB=0.457421;SGB=83.1885;VDB=0.0658526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.9:647108 chr09:000647108 0 W/647108-647108 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.852912;DP=4318;DP4=1846,2264,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.53956e-11;MQSB=0.981949;RPB=0.99993;SGB=50.9344;VDB=0.645865;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.9:652259 chr09:000652259 0 W/652259-652259 FN434-S Single Base Substitution T-A INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN1453-S.SNP.9:655958 chr09:000655958 0 W/655958-655958 FN1453-S Single Base Substitution C-T INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1075-S.SNP.9:659188 chr09:000659188 0 W/659188-659188 FN1075-S Single Base Substitution G-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3846-S.SNP.9:662315 chr09:000662315 0 W/662315-662315 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.609413;DP=2679;DP4=1247,1344,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000178758;MQSB=0.824795;RPB=0.952559;SGB=39.9877;VDB=0.515534;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.9:662398 chr09:000662398 0 W/662398-662398 FN453-S Single Base Substitution A-T INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1754-S.SNP.9:664048 chr09:000664048 0 W/664048-664048 FN1754-S SNP A -> G AC=1;AN=188;BQB=0.127327;DP=2311;DP4=890,1386,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.765e-05;MQSB=0.00207825;RPB=0.712196;SGB=-86.4405;VDB=0.251772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.9:670378 chr09:000670378 0 W/670378-670378 FN1556-S Single Base Substitution A-G INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN864-S.SNP.9:677968 chr09:000677968 0 W/677968-677968 FN864-S Single Base Substitution G-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3917-S.SNP.9:685512 chr09:000685512 0 W/685512-685512 FN3917-S SNP G -> A AC=2;AN=158;BQB=0.898764;DP=2629;DP4=1242,1299,11,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.35775e-14;MQSB=0.8346;RPB=0.988052;SGB=95.131;VDB=0.437369;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E777|1217|LOC_Os09g01980|protein_coding|CODING|LOC_Os09g01980.1|6|1) FN3690-S.SNP.9:687490 chr09:000687490 0 W/687490-687490 FN3690-S SNP A -> T AC=1;AN=190;BQB=0.939486;DP=2718;DP4=1380,1239,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00294334;MQB=1.7852e-06;MQSB=0.930168;RPB=0.999313;SGB=67.3108;VDB=0.879651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.9:695631 chr09:000695631 0 W/695631-695631 FN1357-S Single Base Substitution A-G INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1561-S.SNP.9:697206 chr09:000697206 0 W/697206-697206 FN1561-S Single Base Substitution C-T INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3095-S.SNP.9:697599 chr09:000697599 0 W/697599-697599 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.999767;DP=2684;DP4=1272,1328,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.90686e-09;MQSB=0.972909;RPB=0.988975;SGB=66.8296;VDB=0.485546;EFF=INTRON(MODIFIER||||138|LOC_Os09g02010|protein_coding|CODING|LOC_Os09g02010.1|1|1) FN1717-S.SNP.9:710818 chr09:000710818 0 W/710818-710818 FN1717-S SNP A -> G AC=2;AN=188;BQB=0.880069;DP=2194;DP4=1088,1042,10,15;HOB=0.0210502;ICB=0.494738;MQ=27;MQ0F=0.104376;MQB=0.813812;MQSB=1.44844e-10;RPB=0.380225;SGB=48.9658;VDB=0.509856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C43R|1753|LOC_Os09g02020|protein_coding|CODING|LOC_Os09g02020.1|1|1) FN1723-S.SNP.9:717160 chr09:000717160 0 W/717160-717160 FN1723-S SNP T -> G AC=2;AN=188;BQB=0.0479374;DP=4146;DP4=2096,1980,36,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.60131e-25;MQSB=0.994061;RPB=0.796714;SGB=-177.339;VDB=0.201944;EFF=INTERGENIC(MODIFIER||||||||||1) FN1128-S.SNP.9:717387 chr09:000717387 0 W/717387-717387 FN1128-S Single Base Substitution C-G INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1389-S.SNP.9:721232 chr09:000721232 0 W/721232-721232 FN1389-S Single Base Substitution C-T INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN579-S.SNP.9:721378 chr09:000721378 0 W/721378-721378 FN579-S Single Base Substitution G-A INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1257-S.SNP.9:734565 chr09:000734565 0 W/734565-734565 FN1257-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. 704-6.SNP.9:735097 chr09:000735097 0 W/735097-735097 704-6 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os09g02030 retrotransposon protein, putative, unclassified, expressed SNo: 1460, Mutant_ID: 704-6, Generation: M2, Mutations: 19, Genes: 8, Seed availability: No. FN780-S.SNP.9:737526 chr09:000737526 0 W/737526-737526 FN780-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN2199-S.SNP.9:743828 chr09:000743828 0 W/743828-743828 FN2199-S SNP T -> C AC=1;AN=190;BQB=0.409588;DP=5083;DP4=2398,2313,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000196734;MQB=2.84186e-12;MQSB=0.955544;RPB=0.908111;SGB=41.5369;VDB=0.889177;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.9:744314 chr09:000744314 0 W/744314-744314 FN434-S Single Base Substitution A-G INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN-77.SNP.9:744923 chr09:000744923 0 W/744923-744923 FN-77 Single Base Substitution A-G INTERGENIC HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN1452-S.SNP.9:749557 chr09:000749557 0 W/749557-749557 FN1452-S Single Base Substitution T-A INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN2634-S.SNP.9:752329 chr09:000752329 0 W/752329-752329 FN2634-S SNP T -> C AC=2;AN=200;BQB=0.377788;DP=5381;DP4=2731,2390,16,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.91417e-29;MQSB=0.914944;RPB=0.463961;SGB=229.261;VDB=0.0169603;EFF=INTRON(MODIFIER||||189|LOC_Os09g02060|protein_coding|CODING|LOC_Os09g02060.1|1|1) FN3772-S.SNP.9:754631 chr09:000754631 0 W/754631-754631 FN3772-S SNP T -> C AC=2;AN=190;BQB=0.973893;DP=2429;DP4=1182,1162,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30476e-09;MQSB=0.904011;RPB=0.638467;SGB=53.8699;VDB=0.977097;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.9:754936 chr09:000754936 0 W/754936-754936 FN-162 Single Base Substitution C-T INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1440-S.SNP.9:759600 chr09:000759600 0 W/759600-759600 FN1440-S Single Base Substitution T-A INTRON HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN-246.SNP.9:764939 chr09:000764939 0 W/764939-764939 FN-246 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g02080 retrotransposon protein, putative, unclassified, expressed SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2607-S.SNP.9:766948 chr09:000766948 0 W/766948-766948 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.709349;DP=4181;DP4=1978,1997,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.98996e-09;MQSB=0.699197;RPB=0.511269;SGB=26.7492;VDB=0.61752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.9:783229 chr09:000783229 0 W/783229-783229 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.422485;DP=4229;DP4=2001,1998,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=15;MQ0F=0.468669;MQB=0.26174;MQSB=0;RPB=0.921743;SGB=58.1246;VDB=0.986254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.9:790815 chr09:000790815 0 W/790815-790815 FN1650-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os09g02110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1472-S.SNP.9:796517 chr09:000796517 0 W/796517-796517 FN1472-S Single Base Substitution G-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN863-S.SNP.9:802053 chr09:000802053 0 W/802053-802053 FN863-S Single Base Substitution A-T INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2433.SNP.9:807566 chr09:000807566 0 W/807566-807566 FN2433 SNP G -> A AC=1;AN=200;BQB=0.641647;DP=4243;DP4=2079,1864,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000235682;MQB=3.83178e-13;MQSB=0.997878;RPB=0.99481;SGB=20.7261;VDB=0.140584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.9:821754 chr09:000821754 0 W/821754-821754 FN3681-S SNP T -> A AC=1;AN=190;BQB=0.886026;DP=2925;DP4=1408,1393,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.98361e-10;MQSB=0.952612;RPB=0.970011;SGB=62.7569;VDB=0.177657;EFF=INTRON(MODIFIER||||205|LOC_Os09g02140|protein_coding|CODING|LOC_Os09g02140.1|4|1) FN3775-S.SNP.9:825937 chr09:000825937 0 W/825937-825937 FN3775-S SNP G -> C AC=1;AN=190;BQB=0.944075;DP=2489;DP4=1312,1095,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00361591;MQB=0.000327319;MQSB=0.0165507;RPB=0.617612;SGB=30.8803;VDB=0.244443;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.9:826549 chr09:000826549 0 W/826549-826549 FN1229-S Single Base Substitution G-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3481-S.SNP.9:827420 chr09:000827420 0 W/827420-827420 FN3481-S SNP A -> T AC=2;AN=184;BQB=0.999971;DP=3214;DP4=1331,1649,14,19;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0186683;MQB=0.665091;MQSB=0.951918;RPB=0.97615;SGB=106.184;VDB=0.803015;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.9:827844 chr09:000827844 0 W/827844-827844 FN3451-S SNP A -> T AC=1;AN=184;BQB=0.396507;DP=2846;DP4=1240,1496,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00386507;MQB=0.00168268;MQSB=0.973609;RPB=0.49466;SGB=6.80232;VDB=0.551483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.9:830320 chr09:000830320 0 W/830320-830320 FN3821-S SNP A -> G AC=2;AN=190;BQB=0.699293;DP=2855;DP4=1347,1397,10,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.9362e-10;MQSB=0.922497;RPB=0.907746;SGB=64.5316;VDB=0.933564;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.9:835180 chr09:000835180 0 W/835180-835180 FN2321 SNP A -> G AC=1;AN=192;BQB=0.0460898;DP=3457;DP4=2048,918,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.40843e-10;MQSB=0.363361;RPB=0.327324;SGB=-219.658;VDB=0.651261;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.9:839684 chr09:000839684 0 W/839684-839684 FN997-S Single Base Substitution C-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN2254-S.SNP.9:840483 chr09:000840483 0 W/840483-840483 FN2254-S SNP T -> A AC=1;AN=190;BQB=0.417012;DP=4929;DP4=2363,2291,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00344898;MQB=4.77471e-05;MQSB=0.799187;RPB=0.551309;SGB=33.8752;VDB=0.165791;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.9:845065 chr09:000845065 0 W/845065-845065 FN845-S Single Base Substitution G-C INTRON HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2704-S.SNP.9:849024 chr09:000849024 0 W/849024-849024 FN2704-S SNP T -> C AC=1;AN=200;BQB=0.701152;DP=4943;DP4=2544,2171,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77602e-19;MQSB=0.925634;RPB=0.878259;SGB=65.9573;VDB=0.0129399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.9:849517 chr09:000849517 0 W/849517-849517 FN2473 SNP T -> G AC=1;AN=200;BQB=0.96575;DP=4630;DP4=2365,2025,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.42925e-09;MQSB=0.97007;RPB=0.980341;SGB=40.2696;VDB=0.643938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1698-S.SNP.9:850925 chr09:000850925 0 W/850925-850925 FN1698-S SNP G -> A AC=1;AN=188;BQB=0.0293451;DP=2642;DP4=1073,1538,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000978928;MQSB=0.944767;RPB=0.984709;SGB=-0.634963;VDB=0.892694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.9:854260 chr09:000854260 0 W/854260-854260 FN1075-S Single Base Substitution T-C INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1389-S.SNP.9:863364 chr09:000863364 0 W/863364-863364 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2381.SNP.9:865209 chr09:000865209 0 W/865209-865209 FN2381 SNP G -> A AC=1;AN=192;BQB=0.816682;DP=4244;DP4=2044,1935,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.56788e-14;MQSB=0.484217;RPB=0.674127;SGB=-9.12519;VDB=0.573531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P968L|1077|LOC_Os09g02190|protein_coding|CODING|LOC_Os09g02190.1|5|1) FN-222.SNP.9:866309 chr09:000866309 0 W/866309-866309 FN-222 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3507-S.SNP.9:866891 chr09:000866891 0 W/866891-866891 FN3507-S SNP A -> C AC=1;AN=188;BQB=0.87903;DP=3839;DP4=2126,1584,16,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.87722e-10;MQSB=0.964343;RPB=0.752376;SGB=57.244;VDB=0.437779;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcG|S478|1077|LOC_Os09g02190|protein_coding|CODING|LOC_Os09g02190.1|2|1) FN3293-S.SNP.9:867900 chr09:000867900 0 W/867900-867900 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.597865;DP=3746;DP4=1970,1684,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05916e-09;MQSB=0.976268;RPB=0.851468;SGB=67.4439;VDB=0.877637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D168N|1077|LOC_Os09g02190|protein_coding|CODING|LOC_Os09g02190.1|1|1) FN1068-S.SNP.9:884233 chr09:000884233 0 W/884233-884233 FN1068-S Single Base Substitution T-A INTRON HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN-136.SNP.9:892677 chr09:000892677 0 W/892677-892677 FN-136 Single Base Substitution A-G INTERGENIC HOMO SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3916-S.SNP.9:893647 chr09:000893647 0 W/893647-893647 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.905846;DP=2593;DP4=1207,1269,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.623e-08;MQSB=0.96914;RPB=0.883693;SGB=47.0672;VDB=0.18368;EFF=INTRON(MODIFIER||||113|LOC_Os09g02230|protein_coding|CODING|LOC_Os09g02230.1|1|1) FN3613-S.SNP.9:895661 chr09:000895661 0 W/895661-895661 FN3613-S SNP T -> A AC=2;AN=190;BQB=0.837098;DP=3053;DP4=1374,1476,19,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.70668e-21;MQSB=0.994715;RPB=0.999062;SGB=0.0710663;VDB=0.148092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.9:896866 chr09:000896866 0 W/896866-896866 FN2086-S SNP C -> T AC=1;AN=168;BQB=0.286471;DP=2914;DP4=1596,1248,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15249e-08;MQSB=0.994624;RPB=0.988849;SGB=-13.6493;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.9:900638 chr09:000900638 0 W/900638-900638 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN-60.SNP.9:903139 chr09:000903139 0 W/903139-903139 FN-60 Single Base Substitution T-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN2479.SNP.9:916386 chr09:000916386 0 W/916386-916386 FN2479 SNP T -> G AC=1;AN=200;BQB=0.274335;DP=4573;DP4=2106,2161,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.08691e-15;MQSB=0.99231;RPB=0.898919;SGB=118.737;VDB=0.689555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Cgt|S525R|794|LOC_Os09g02260|protein_coding|CODING|LOC_Os09g02260.1|1|1) FN1369-S.SNP.9:924126 chr09:000924126 0 W/924126-924126 FN1369-S Single Base Substitution A-G INTRON Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3452-S.SNP.9:929161 chr09:000929161 0 W/929161-929161 FN3452-S SNP A -> T AC=2;AN=184;BQB=0.985746;DP=2627;DP4=1058,1278,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.57704e-13;MQSB=0.976146;RPB=0.934091;SGB=-10.5397;VDB=0.293452;EFF=INTRON(MODIFIER||||330|LOC_Os09g02284|protein_coding|CODING|LOC_Os09g02284.1|2|1) FN3595-S.SNP.9:930492 chr09:000930492 0 W/930492-930492 FN3595-S SNP A -> T AC=1;AN=190;BQB=0.637089;DP=3065;DP4=1540,1372,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000280358;MQSB=0.999275;RPB=0.706961;SGB=25.439;VDB=0.0100664;EFF=INTRON(MODIFIER||||330|LOC_Os09g02284|protein_coding|CODING|LOC_Os09g02284.1|2|1) FN1064-S.SNP.9:930831 chr09:000930831 0 W/930831-930831 FN1064-S Single Base Substitution G-A INTRON HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2242-S.SNP.9:939122 chr09:000939122 0 W/939122-939122 FN2242-S SNP A -> G AC=1;AN=190;BQB=0.884896;DP=4790;DP4=2194,2290,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208768;MQB=1.30401e-10;MQSB=0.028028;RPB=0.999627;SGB=36.4291;VDB=0.972352;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.9:940368 chr09:000940368 0 W/940368-940368 FN-147 Single Base Substitution A-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN4172-S.SNP.9:941497 chr09:000941497 0 W/941497-941497 FN4172-S SNP C -> G AC=2;AN=170;BQB=0.974626;DP=1910;DP4=807,1018,9,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.79157e-10;MQSB=0.949547;RPB=0.575937;SGB=65.6427;VDB=0.564771;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.9:941791 chr09:000941791 0 W/941791-941791 FN1043-S Single Base Substitution A-T INTERGENIC HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN3478-S.SNP.9:942229 chr09:000942229 0 W/942229-942229 FN3478-S SNP T -> C AC=1;AN=184;BQB=0.872089;DP=2663;DP4=1198,1371,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.17947e-09;MQSB=0.870021;RPB=0.984021;SGB=57.786;VDB=0.156367;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.9:942413 chr09:000942413 0 W/942413-942413 W416-6-1 Single Base Substitution G-T INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1916.SNP.9:942550 chr09:000942550 0 W/942550-942550 FN1916 Single Base Substitution C-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN3665-S.SNP.9:943430 chr09:000943430 0 W/943430-943430 FN3665-S SNP A -> G AC=1;AN=190;BQB=0.915286;DP=2586;DP4=1371,1063,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.5833e-12;MQSB=0.182394;RPB=0.357457;SGB=85.8548;VDB=0.0235659;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.9:950388 chr09:000950388 0 W/950388-950388 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.929974;DP=4623;DP4=2197,2182,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9081e-14;MQSB=0.854866;RPB=0.65074;SGB=47.7211;VDB=0.889746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.9:952046 chr09:000952046 0 W/952046-952046 FN1385-S Single Base Substitution T-C INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1122-S.SNP.9:955264 chr09:000955264 0 W/955264-955264 FN1122-S Single Base Substitution A-G INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN796-S.SNP.9:956648 chr09:000956648 0 W/956648-956648 FN796-S Single Base Substitution T-G INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN711-S.SNP.9:981317 chr09:000981317 0 W/981317-981317 FN711-S Single Base Substitution C-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN710-S.SNP.9:982985 chr09:000982985 0 W/982985-982985 FN710-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os09g02380 expressed protein SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN2774-S.SNP.9:984150 chr09:000984150 0 W/984150-984150 FN2774-S SNP T -> G AC=1;AN=198;BQB=0.0566067;DP=2321;DP4=1442,578,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000430849;MQB=0.0105068;MQSB=2.27967e-20;RPB=0.981605;SGB=32.9588;VDB=0.585871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.9:986877 chr09:000986877 0 W/986877-986877 FN2370 SNP T -> C AC=1;AN=192;BQB=0.998057;DP=3970;DP4=1616,2149,6,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08429e-11;MQSB=0.99477;RPB=0.833207;SGB=61.1661;VDB=0.0246307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.9:990332 chr09:000990332 0 W/990332-990332 FN2602-S SNP A -> T AC=1;AN=198;BQB=0.583334;DP=4172;DP4=2096,1913,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.01683e-08;MQSB=0.983159;RPB=0.75676;SGB=26.7492;VDB=0.0991356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.9:993053 chr09:000993053 0 W/993053-993053 FN3810-S SNP T -> G AC=1;AN=190;BQB=0.898855;DP=2269;DP4=996,1210,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23637e-05;MQSB=0.976255;RPB=0.186538;SGB=18.3316;VDB=0.598931;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.9:999299 chr09:000999299 0 W/999299-999299 FN723-S Single Base Substitution G-A INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN4206-S.SNP.9:1002341 chr09:001002341 0 W/1002341-1002341 FN4206-S SNP T -> C AC=1;AN=170;BQB=0.853933;DP=2467;DP4=1117,1243,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.50049e-05;MQSB=0.966164;RPB=0.980719;SGB=27.9928;VDB=0.103854;EFF=INTRON(MODIFIER||||133|LOC_Os09g02420|protein_coding|CODING|LOC_Os09g02420.1|1|1) FN3368-S.SNP.9:1004243 chr09:001004243 0 W/1004243-1004243 FN3368-S SNP C -> T AC=2;AN=184;BQB=0.957852;DP=2988;DP4=1378,1453,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.44895e-17;MQSB=0.989567;RPB=0.991829;SGB=106.184;VDB=0.228682;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.9:1021295 chr09:001021295 0 W/1021295-1021295 FN3442-S SNP C -> T AC=1;AN=184;BQB=0.959624;DP=2701;DP4=1313,1312,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000370233;MQB=3.51029e-08;MQSB=0.512512;RPB=0.674639;SGB=53.2642;VDB=0.563312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D511N|1181|LOC_Os09g02460|protein_coding|CODING|LOC_Os09g02460.1|3|1) FN1380-S.SNP.9:1033615 chr09:001033615 0 W/1033615-1033615 FN1380-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g02490 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN3928-S.SNP.9:1033625 chr09:001033625 0 W/1033625-1033625 FN3928-S SNP G -> A AC=2;AN=158;BQB=0.998854;DP=2124;DP4=826,1198,5,17;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00047081;MQB=1.78942e-08;MQSB=0.0841121;RPB=0.998316;SGB=90.7616;VDB=0.65294;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R123*|647|LOC_Os09g02490|protein_coding|CODING|LOC_Os09g02490.1|1|1);LOF=(LOC_Os09g02490|LOC_Os09g02490|1|1.00);NMD=(LOC_Os09g02490|LOC_Os09g02490|1|1.00) FN2664-S.SNP.9:1036762 chr09:001036762 0 W/1036762-1036762 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.889441;DP=4547;DP4=2239,2142,15,16;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0103365;MQB=2.32144e-06;MQSB=0.0554633;RPB=0.247801;SGB=101.557;VDB=0.509451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F587L|926|LOC_Os09g02500|protein_coding|CODING|LOC_Os09g02500.1|3|1) FN2529-S.SNP.9:1039918 chr09:001039918 0 W/1039918-1039918 FN2529-S SNP C -> A AC=1;AN=198;BQB=0.55075;DP=3890;DP4=2020,1662,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000680455;MQSB=0.982549;RPB=0.241841;SGB=8.58354;VDB=0.785665;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.9:1044808 chr09:001044808 0 W/1044808-1044808 FN776-S Single Base Substitution C-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN4025-S.SNP.9:1050004 chr09:001050004 0 W/1050004-1050004 FN4025-S SNP T -> C AC=2;AN=168;BQB=0.999996;DP=2408;DP4=1093,1190,11,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.78031e-13;MQSB=0.919;RPB=0.845539;SGB=96.481;VDB=0.0149167;EFF=INTRON(MODIFIER||||152|LOC_Os09g02510|protein_coding|CODING|LOC_Os09g02510.1|1|1) FN_543-2-6.SNP.9:1053822 chr09:001053822 0 W/1053822-1053822 FN_543-2-6 Single Base Substitution G-A HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3806-S.SNP.9:1059594 chr09:001059594 0 W/1059594-1059594 FN3806-S SNP G -> A AC=1;AN=190;BQB=0.941382;DP=1593;DP4=947,552,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000283772;MQSB=0.249387;RPB=0.564555;SGB=26.3271;VDB=0.462061;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.9:1060712 chr09:001060712 0 W/1060712-1060712 FN1255-S Single Base Substitution G-T INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN510-S.SNP.9:1068463 chr09:001068463 0 W/1068463-1068463 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2673-S.SNP.9:1069589 chr09:001069589 0 W/1069589-1069589 FN2673-S SNP C -> G AC=1;AN=200;BQB=0.926915;DP=4135;DP4=2209,1741,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.86097e-11;MQSB=0.418423;RPB=0.909968;SGB=61.9006;VDB=0.974085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.9:1069778 chr09:001069778 0 W/1069778-1069778 FN1463-S Single Base Substitution T-G INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1531-S.SNP.9:1072166 chr09:001072166 0 W/1072166-1072166 FN1531-S Single Base Substitution C-G INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN3800-S.SNP.9:1072587 chr09:001072587 0 W/1072587-1072587 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.99401;DP=3083;DP4=1260,1688,3,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.22175e-11;MQSB=0.957109;RPB=0.526734;SGB=57.4238;VDB=0.310689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.9:1073307 chr09:001073307 0 W/1073307-1073307 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.819581;DP=4451;DP4=2219,1978,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6119e-17;MQSB=0.861449;RPB=0.343898;SGB=87.1368;VDB=0.243681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.9:1073308 chr09:001073308 0 W/1073308-1073308 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.918606;DP=4460;DP4=2181,1994,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67145e-16;MQSB=0.915018;RPB=0.389516;SGB=60.747;VDB=0.265897;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.9:1073942 chr09:001073942 0 W/1073942-1073942 FN447-S Single Base Substitution G-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN447-S.SNP.9:1073943 chr09:001073943 0 W/1073943-1073943 FN447-S Single Base Substitution C-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN533-S.SNP.9:1080228 chr09:001080228 0 W/1080228-1080228 FN533-S Single Base Substitution T-G INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2255-S.SNP.9:1084337 chr09:001084337 0 W/1084337-1084337 FN2255-S SNP T -> G AC=1;AN=190;BQB=0.955768;DP=4880;DP4=2459,1934,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204918;MQB=3.22376e-10;MQSB=0.736905;RPB=0.996872;SGB=11.8805;VDB=0.432065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.9:1086431 chr09:001086431 0 W/1086431-1086431 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.973742;DP=3091;DP4=1650,1329,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26258e-05;MQSB=0.0255044;RPB=0.946151;SGB=39.699;VDB=0.739066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.9:1087288 chr09:001087288 0 W/1087288-1087288 FN1204-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1504-S.SNP.9:1087505 chr09:001087505 0 W/1087505-1087505 FN1504-S Single Base Substitution T-C INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1414-S.SNP.9:1090403 chr09:001090403 0 W/1090403-1090403 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3532-S.SNP.9:1100572 chr09:001100572 0 W/1100572-1100572 FN3532-S SNP T -> A AC=1;AN=188;BQB=0.99174;DP=2900;DP4=1458,1329,10,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.57548e-15;MQSB=0.960678;RPB=0.952631;SGB=59.139;VDB=0.132206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.9:1123891 chr09:001123891 0 W/1123891-1123891 FN2791-S SNP T -> A AC=1;AN=198;BQB=0.357047;DP=4307;DP4=2333,1718,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.89009e-12;MQSB=0.994604;RPB=0.4833;SGB=39.7248;VDB=0.9274;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.9:1128895 chr09:001128895 0 W/1128895-1128895 FN-379 Single Base Substitution A-G INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1061-S.SNP.9:1132698 chr09:001132698 0 W/1132698-1132698 FN1061-S Single Base Substitution T-A INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3377-S.SNP.9:1134777 chr09:001134777 0 W/1134777-1134777 FN3377-S SNP G -> T AC=1;AN=184;BQB=0.91495;DP=3637;DP4=1724,1739,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0239208;MQB=0.000369656;MQSB=2.38545e-05;RPB=0.969917;SGB=39.2697;VDB=0.95063;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E265*|832|LOC_Os09g02630|protein_coding|CODING|LOC_Os09g02630.1|3|1);LOF=(LOC_Os09g02630|LOC_Os09g02630|1|1.00);NMD=(LOC_Os09g02630|LOC_Os09g02630|1|1.00) FN1439-S.SNP.9:1152494 chr09:001152494 0 W/1152494-1152494 FN1439-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN3991-S.SNP.9:1153108 chr09:001153108 0 W/1153108-1153108 FN3991-S SNP C -> A AC=1;AN=168;BQB=0.764927;DP=2557;DP4=1179,1268,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00013952;MQSB=0.934501;RPB=0.72694;SGB=-4.39415;VDB=0.419414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.9:1166028 chr09:001166028 0 W/1166028-1166028 FN1423-S Single Base Substitution C-A INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-225.SNP.9:1170619 chr09:001170619 0 W/1170619-1170619 FN-225 Single Base Substitution T-A INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN727-S.SNP.9:1170620 chr09:001170620 0 W/1170620-1170620 FN727-S Single Base Substitution T-A INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN4150-S.SNP.9:1176699 chr09:001176699 0 W/1176699-1176699 FN4150-S SNP G -> C AC=1;AN=170;BQB=0.854231;DP=2215;DP4=1060,1040,13,11;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0234763;MQB=0.549338;MQSB=0.810242;RPB=0.446932;SGB=101.184;VDB=0.749729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.9:1179858 chr09:001179858 0 W/1179858-1179858 FN3555-S SNP C -> G AC=1;AN=188;BQB=0.996343;DP=2718;DP4=1013,1619,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65675e-08;MQSB=0.723931;RPB=0.997072;SGB=67.1521;VDB=0.0170033;EFF=INTERGENIC(MODIFIER||||||||||1) FN-48.SNP.9:1185694 chr09:001185694 0 W/1185694-1185694 FN-48 Single Base Substitution C-T INTERGENIC Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN441-S.SNP.9:1191997 chr09:001191997 0 W/1191997-1191997 FN441-S Single Base Substitution G-A INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3491-S.SNP.9:1194260 chr09:001194260 0 W/1194260-1194260 FN3491-S SNP C -> G AC=1;AN=188;BQB=0.681722;DP=2793;DP4=1341,1380,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86367e-08;MQSB=0.941175;RPB=0.928839;SGB=35.9843;VDB=0.157218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.9:1195705 chr09:001195705 0 W/1195705-1195705 FN3927-S SNP G -> A AC=1;AN=158;BQB=0.394494;DP=2333;DP4=1107,1133,7,12;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0150021;MQB=1.48777e-08;MQSB=0.0644989;RPB=0.904928;SGB=30.927;VDB=0.554614;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.9:1198291 chr09:001198291 0 W/1198291-1198291 FN-87 Single Base Substitution C-G INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN739-S.SNP.9:1206636 chr09:001206636 0 W/1206636-1206636 FN739-S Single Base Substitution G-A INTRON HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-186.SNP.9:1211156 chr09:001211156 0 W/1211156-1211156 FN-186 Single Base Substitution A-C UTR_5_PRIME HOMO SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3700-S.SNP.9:1213385 chr09:001213385 0 W/1213385-1213385 FN3700-S SNP A -> C AC=2;AN=190;BQB=0.763456;DP=2497;DP4=1131,1253,19,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.56702e-20;MQSB=0.995061;RPB=0.878297;SGB=140.173;VDB=0.731712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S619A|662|LOC_Os09g02700|protein_coding|CODING|LOC_Os09g02700.1|9|1) FN3039-S.SNP.9:1219773 chr09:001219773 0 W/1219773-1219773 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.989764;DP=2775;DP4=1450,1244,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.1604e-09;MQSB=0.91224;RPB=0.998357;SGB=49.835;VDB=0.493998;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.9:1232203 chr09:001232203 0 W/1232203-1232203 FN4229-S SNP A -> G AC=2;AN=170;BQB=0.730327;DP=2136;DP4=963,1021,8,8;HOB=0.0232526;ICB=0.494188;MQ=14;MQ0F=0.285112;MQB=0.0179014;MQSB=0.000205688;RPB=0.97753;SGB=65.6427;VDB=0.992457;EFF=INTRON(MODIFIER||||252|LOC_Os09g02729|protein_coding|CODING|LOC_Os09g02729.2|5|1),INTRON(MODIFIER||||412|LOC_Os09g02729|protein_coding|CODING|LOC_Os09g02729.1|5|1) FN3613-S.SNP.9:1234472 chr09:001234472 0 W/1234472-1234472 FN3613-S SNP G -> T AC=2;AN=190;BQB=0.999588;DP=2562;DP4=763,1698,13,22;HOB=0.020831;ICB=0.494793;MQ=19;MQ0F=0.338407;MQB=0.459657;MQSB=0;RPB=0.865116;SGB=74.7373;VDB=0.514404;EFF=INTRON(MODIFIER||||252|LOC_Os09g02729|protein_coding|CODING|LOC_Os09g02729.2|5|1),INTRON(MODIFIER||||412|LOC_Os09g02729|protein_coding|CODING|LOC_Os09g02729.1|5|1) FN2082-S.SNP.9:1238754 chr09:001238754 0 W/1238754-1238754 FN2082-S SNP T -> A AC=1;AN=168;BQB=0.658247;DP=3217;DP4=1802,1373,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49845e-06;MQSB=0.973167;RPB=0.999838;SGB=-36.0898;VDB=0.786101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.9:1254066 chr09:001254066 0 W/1254066-1254066 FN1379-S Single Base Substitution C-T INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1394-S.SNP.9:1254066 chr09:001254066 0 W/1254066-1254066 FN1394-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2290.SNP.9:1254066 chr09:001254066 0 W/1254066-1254066 FN2290 SNP C -> T AC=2;AN=192;BQB=0.929002;DP=4430;DP4=2421,1732,40,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.88535e-37;MQSB=0.983728;RPB=0.403461;SGB=281.026;VDB=0.155193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.9:1254066 chr09:001254066 0 W/1254066-1254066 FN3502-S SNP C -> T AC=1;AN=188;BQB=0.973721;DP=2836;DP4=1494,1290,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.89127e-06;MQSB=0.666775;RPB=0.0903029;SGB=48.979;VDB=0.078761;EFF=INTERGENIC(MODIFIER||||||||||1) FN4206-S.SNP.9:1254066 chr09:001254066 0 W/1254066-1254066 FN4206-S SNP C -> T AC=1;AN=170;BQB=0.924089;DP=2164;DP4=1189,910,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.30197e-08;MQSB=0.789835;RPB=0.996745;SGB=52.3148;VDB=0.666103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.9:1261486 chr09:001261486 0 W/1261486-1261486 FN2118-S SNP G -> A AC=2;AN=168;BQB=1;DP=3249;DP4=1690,1488,23,24;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.74232e-18;MQSB=0.377022;RPB=0.622298;SGB=-2.87883;VDB=0.856019;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.9:1263600 chr09:001263600 0 W/1263600-1263600 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-394.SNP.9:1267433 chr09:001267433 0 W/1267433-1267433 FN-394 Single Base Substitution C-T INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3354-S.SNP.9:1276246 chr09:001276246 0 W/1276246-1276246 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.970132;DP=3484;DP4=1510,1883,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52074e-10;MQSB=0.894527;RPB=0.995797;SGB=56.8786;VDB=0.924601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.9:1279786 chr09:001279786 0 W/1279786-1279786 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.985639;DP=5266;DP4=2481,2461,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29966e-11;MQSB=0.908931;RPB=0.728002;SGB=36.4291;VDB=0.215597;EFF=INTRON(MODIFIER||||253|LOC_Os09g02790|protein_coding|CODING|LOC_Os09g02790.1|2|1) FN3548-S.SNP.9:1280281 chr09:001280281 0 W/1280281-1280281 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.742389;DP=2643;DP4=1396,1129,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18048e-05;MQSB=0.893641;RPB=0.916111;SGB=10.8165;VDB=0.211686;EFF=INTRON(MODIFIER||||253|LOC_Os09g02790|protein_coding|CODING|LOC_Os09g02790.1|2|1) FN831-S.SNP.9:1281905 chr09:001281905 0 W/1281905-1281905 FN831-S Single Base Substitution G-A INTRON HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2364.SNP.9:1287743 chr09:001287743 0 W/1287743-1287743 FN2364 SNP C -> G AC=1;AN=192;BQB=0.990252;DP=5153;DP4=2389,2393,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66636e-13;MQSB=0.773698;RPB=0.467513;SGB=21.4339;VDB=0.0163282;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.9:1297502 chr09:001297502 0 W/1297502-1297502 FN1638-S Single Base Substitution T-C INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN555-S.SNP.9:1304133 chr09:001304133 0 W/1304133-1304133 FN555-S Single Base Substitution C-T INTRON HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3396-S.SNP.9:1306635 chr09:001306635 0 W/1306635-1306635 FN3396-S SNP A -> T AC=1;AN=184;BQB=0.547484;DP=2583;DP4=1207,1284,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.13613e-08;MQSB=0.853679;RPB=0.999965;SGB=25.7969;VDB=0.935146;EFF=INTRON(MODIFIER||||1004|LOC_Os09g02810|protein_coding|CODING|LOC_Os09g02810.1|12|1) FN2619-S.SNP.9:1313402 chr09:001313402 0 W/1313402-1313402 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.191799;DP=4714;DP4=2207,2267,13,25;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43949e-20;MQSB=0.815009;RPB=0.808947;SGB=126.432;VDB=0.41956;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.9:1314546 chr09:001314546 0 W/1314546-1314546 FN-162 Single Base Substitution C-G INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2791-S.SNP.9:1316592 chr09:001316592 0 W/1316592-1316592 FN2791-S SNP G -> C AC=1;AN=198;BQB=0.604539;DP=3787;DP4=1959,1499,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000264061;MQB=5.49552e-10;MQSB=0.99993;RPB=0.978458;SGB=61.7198;VDB=0.371365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.9:1320921 chr09:001320921 0 W/1320921-1320921 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.958674;DP=3564;DP4=2338,1184,17,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000280584;MQB=1.50299e-11;MQSB=0.99126;RPB=0.929423;SGB=-13.6493;VDB=0.614967;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V68|371|LOC_Os09g02820|protein_coding|CODING|LOC_Os09g02820.1|2|1) FN2656-S.SNP.9:1328513 chr09:001328513 0 W/1328513-1328513 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.617884;DP=5286;DP4=2838,2165,30,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.0573e-23;MQSB=0.902368;RPB=0.915763;SGB=144.819;VDB=0.948347;EFF=INTERGENIC(MODIFIER||||||||||1) W475-4-2.SNP.9:1330091 chr09:001330091 0 W/1330091-1330091 W475-4-2 Single Base Substitution C-T INTERGENIC HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN1734-S.SNP.9:1334519 chr09:001334519 0 W/1334519-1334519 FN1734-S SNP C -> G AC=2;AN=188;BQB=0.511151;DP=2758;DP4=1253,1452,14,21;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0163162;MQB=8.6929e-05;MQSB=1.39104e-08;RPB=0.994851;SGB=-123.291;VDB=0.610968;EFF=INTRON(MODIFIER||||961|LOC_Os09g02840|protein_coding|CODING|LOC_Os09g02840.1|2|1) FN-206.SNP.9:1334638 chr09:001334638 0 W/1334638-1334638 FN-206 Single Base Substitution C-T INTRON HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-281.SNP.9:1334781 chr09:001334781 0 W/1334781-1334781 FN-281 Single Base Substitution T-C INTRON HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN_798-4-2.SNP.9:1337031 chr09:001337031 0 W/1337031-1337031 FN_798-4-2 Single Base Substitution G-A Homo LOC_Os09g02840 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN2724-S.SNP.9:1342413 chr09:001342413 0 W/1342413-1342413 FN2724-S SNP A -> T AC=1;AN=200;BQB=0.48447;DP=5026;DP4=2419,2166,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34652e-07;MQSB=0.0176426;RPB=0.621088;SGB=-13.1102;VDB=0.967616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.9:1343747 chr09:001343747 0 W/1343747-1343747 FN1451-S Single Base Substitution G-A INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3330-S.SNP.9:1343774 chr09:001343774 0 W/1343774-1343774 FN3330-S SNP G -> T AC=1;AN=184;BQB=0.967357;DP=2749;DP4=1641,1019,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000232664;MQSB=0.870406;RPB=0.961081;SGB=30.6558;VDB=0.554573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.9:1351290 chr09:001351290 0 W/1351290-1351290 FN3514-S SNP G -> T AC=1;AN=188;BQB=0.854513;DP=2736;DP4=1403,1228,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82287e-06;MQSB=0.923182;RPB=0.137036;SGB=23.5329;VDB=0.647939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.9:1359311 chr09:001359311 0 W/1359311-1359311 FN1053-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2794-S.SNP.9:1360643 chr09:001360643 0 W/1360643-1360643 FN2794-S SNP G -> T AC=1;AN=198;BQB=0.380103;DP=4024;DP4=1928,1879,16,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.17783e-12;MQSB=0.999829;RPB=0.439556;SGB=50.1053;VDB=0.763514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.9:1361364 chr09:001361364 0 W/1361364-1361364 FN3994-S SNP T -> C AC=1;AN=168;BQB=0.755169;DP=2654;DP4=1076,1374,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.81829e-06;MQSB=0.945071;RPB=0.393968;SGB=-0.101747;VDB=0.807393;EFF=INTRON(MODIFIER||||419|LOC_Os09g02910|protein_coding|CODING|LOC_Os09g02910.1|9|1) FN2233-S.SNP.9:1363584 chr09:001363584 0 W/1363584-1363584 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.549953;DP=4717;DP4=2228,2086,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.28428e-06;MQSB=0.964009;RPB=0.98197;SGB=13.4442;VDB=0.952202;EFF=INTRON(MODIFIER||||419|LOC_Os09g02910|protein_coding|CODING|LOC_Os09g02910.1|8|1) FN1230-S.SNP.9:1364055 chr09:001364055 0 W/1364055-1364055 FN1230-S Single Base Substitution T-C INTRON HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN3668-S.SNP.9:1369550 chr09:001369550 0 W/1369550-1369550 FN3668-S SNP T -> A AC=1;AN=190;BQB=0.918203;DP=3037;DP4=1344,1554,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.3855e-07;MQSB=0.978726;RPB=0.615916;SGB=25.439;VDB=0.356497;EFF=INTRON(MODIFIER||||419|LOC_Os09g02910|protein_coding|CODING|LOC_Os09g02910.1|1|1) FN1337-S.SNP.9:1375062 chr09:001375062 0 W/1375062-1375062 FN1337-S Single Base Substitution T-A INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-183.SNP.9:1377531 chr09:001377531 0 W/1377531-1377531 FN-183 Single Base Substitution G-A INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN1514-S.SNP.9:1385011 chr09:001385011 0 W/1385011-1385011 FN1514-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2187-S.SNP.9:1390817 chr09:001390817 0 W/1390817-1390817 FN2187-S SNP C -> G AC=1;AN=190;BQB=0.871789;DP=4689;DP4=2326,2037,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00042653;MQB=2.55868e-11;MQSB=0.290728;RPB=0.909157;SGB=33.8752;VDB=0.0284476;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.9:1399392 chr09:001399392 0 W/1399392-1399392 FN1526-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g02980 retrotransposon protein, putative, Ty1-copia subclass SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN893-S.SNP.9:1400581 chr09:001400581 0 W/1400581-1400581 FN893-S Single Base Substitution G-C INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2428.SNP.9:1405261 chr09:001405261 0 W/1405261-1405261 FN2428 SNP T -> A AC=1;AN=200;BQB=0.970974;DP=4209;DP4=1931,1998,5,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00356379;MQB=0.00365609;MQSB=0.00665476;RPB=0.567199;SGB=40.2696;VDB=0.248144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E227D|1303|LOC_Os09g02990|protein_coding|CODING|LOC_Os09g02990.1|4|1) FN1642-S.SNP.9:1407066 chr09:001407066 0 W/1407066-1407066 FN1642-S Single Base Substitution G-A INTERGENIC Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3698-S.SNP.9:1409107 chr09:001409107 0 W/1409107-1409107 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.915219;DP=2640;DP4=1220,1310,14,10;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000757576;MQB=1.48582e-10;MQSB=0.181873;RPB=0.81917;SGB=103.742;VDB=0.995134;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.9:1412031 chr09:001412031 0 W/1412031-1412031 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.889438;DP=4211;DP4=1850,2196,16,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27296e-17;MQSB=0.96618;RPB=0.437652;SGB=148.222;VDB=0.779254;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.9:1413990 chr09:001413990 0 W/1413990-1413990 FN573-S Single Base Substitution A-G INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2325.SNP.9:1417811 chr09:001417811 0 W/1417811-1417811 FN2325 SNP C -> T AC=1;AN=192;BQB=0.978858;DP=5020;DP4=2664,2077,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199203;MQB=2.32373e-14;MQSB=0.447898;RPB=0.362888;SGB=117.676;VDB=0.610067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.9:1419336 chr09:001419336 0 W/1419336-1419336 FN2223-S SNP A -> G AC=1;AN=190;BQB=0.869957;DP=4403;DP4=1716,2107,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20764e-12;MQSB=0.00057991;RPB=0.962996;SGB=71.6393;VDB=0.607279;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.9:1423655 chr09:001423655 0 W/1423655-1423655 FN573-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g03030 transposon protein, putative, CACTA, En/Spm sub-class SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2234-S.SNP.9:1430418 chr09:001430418 0 W/1430418-1430418 FN2234-S SNP C -> A AC=2;AN=190;BQB=0.892325;DP=3100;DP4=1078,1817,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.74436e-10;MQSB=0.0227627;RPB=0.492399;SGB=13.4344;VDB=0.442082;EFF=INTRON(MODIFIER||||1298|LOC_Os09g03040|protein_coding|CODING|LOC_Os09g03040.1|1|1) FN580-S.SNP.9:1440682 chr09:001440682 0 W/1440682-1440682 FN580-S Single Base Substitution G-T INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN_809-6-1.SNP.9:1446209 chr09:001446209 0 W/1446209-1446209 FN_809-6-1 Single Base Substitution A-G Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2536-S.SNP.9:1446651 chr09:001446651 0 W/1446651-1446651 FN2536-S SNP T -> A AC=1;AN=198;BQB=0.948227;DP=3562;DP4=1195,1726,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00112296;MQB=1.6912e-09;MQSB=0.407265;RPB=0.972456;SGB=-76.2011;VDB=0.91184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.9:1449362 chr09:001449362 0 W/1449362-1449362 FN3629-S SNP C -> T AC=1;AN=190;BQB=0.387721;DP=2944;DP4=1217,1626,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0349864;MQB=0.863282;MQSB=4.28604e-15;RPB=0.986608;SGB=39.9877;VDB=0.906563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.9:1449738 chr09:001449738 0 W/1449738-1449738 FN-176 Single Base Substitution A-G INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN555-S.SNP.9:1462249 chr09:001462249 0 W/1462249-1462249 FN555-S Single Base Substitution T-A INTERGENIC HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2226-S.SNP.9:1466532 chr09:001466532 0 W/1466532-1466532 FN2226-S SNP A -> T AC=1;AN=190;BQB=0.843059;DP=3631;DP4=1613,1257,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0217571;MQB=3.72376e-07;MQSB=0.999926;RPB=0.42448;SGB=-9.89872;VDB=0.895705;EFF=INTRON(MODIFIER||||269|LOC_Os09g03090|protein_coding|CODING|LOC_Os09g03090.1|3|1) FN_769-4-1.SNP.9:1468815 chr09:001468815 0 W/1468815-1468815 FN_769-4-1 Single Base Substitution A-G Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN684-S.SNP.9:1471375 chr09:001471375 0 W/1471375-1471375 FN684-S Single Base Substitution G-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1237-S.SNP.9:1482076 chr09:001482076 0 W/1482076-1482076 FN1237-S Single Base Substitution C-T INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. W500-4-7-1.SNP.9:1489681 chr09:001489681 0 W/1489681-1489681 W500-4-7-1 Single Base Substitution T-A INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN1097-S.SNP.9:1492787 chr09:001492787 0 W/1492787-1492787 FN1097-S Single Base Substitution A-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2372.SNP.9:1494201 chr09:001494201 0 W/1494201-1494201 FN2372 SNP T -> A AC=1;AN=192;BQB=0.0741007;DP=4870;DP4=2392,2149,17,19;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000205339;MQB=7.46833e-19;MQSB=0.000363472;RPB=0.380191;SGB=-125.159;VDB=0.693213;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.9:1494327 chr09:001494327 0 W/1494327-1494327 FN-140 Single Base Substitution G-C INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3452-S.SNP.9:1499391 chr09:001499391 0 W/1499391-1499391 FN3452-S SNP A -> T AC=1;AN=184;BQB=0.940682;DP=2369;DP4=1216,965,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.90593e-06;MQSB=0.246771;RPB=0.259223;SGB=32.2261;VDB=0.173134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.9:1500341 chr09:001500341 0 W/1500341-1500341 FN1529-S Single Base Substitution T-G INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN4344-S.SNP.9:1508108 chr09:001508108 0 W/1508108-1508108 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.761543;DP=2427;DP4=1423,928,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00164813;MQB=0.00498756;MQSB=0.976031;RPB=0.277906;SGB=45.206;VDB=0.268925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.9:1508220 chr09:001508220 0 W/1508220-1508220 FN3831-S SNP A -> G AC=1;AN=190;BQB=0.575311;DP=3070;DP4=1681,1175,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.87924e-06;MQSB=0.260424;RPB=0.317331;SGB=43.2083;VDB=0.48095;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.9:1517780 chr09:001517780 0 W/1517780-1517780 FN818-S Single Base Substitution C-T INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN887-S.SNP.9:1518499 chr09:001518499 0 W/1518499-1518499 FN887-S Single Base Substitution A-G INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2083-S.SNP.9:1518553 chr09:001518553 0 W/1518553-1518553 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.992199;DP=4240;DP4=1930,2062,12,194;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00589623;MQB=0;MQSB=1.80307e-10;RPB=5.51853e-24;SGB=-2823.75;VDB=6.26708e-10;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.9:1520027 chr09:001520027 0 W/1520027-1520027 FN-241 Single Base Substitution A-T INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2192-S.SNP.9:1523792 chr09:001523792 0 W/1523792-1523792 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.79012;DP=4679;DP4=2260,2125,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.37167e-15;MQSB=0.948296;RPB=0.296108;SGB=112.85;VDB=0.0635369;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.9:1528339 chr09:001528339 0 W/1528339-1528339 FN_543-2-6 Single Base Substitution G-T HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2531-S.SNP.9:1532733 chr09:001532733 0 W/1532733-1532733 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.944472;DP=4464;DP4=2078,2146,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0495072;MQB=0.690202;MQSB=0.0639948;RPB=0.270714;SGB=16.3688;VDB=0.737168;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.9:1533104 chr09:001533104 0 W/1533104-1533104 FN3727-S SNP A -> T AC=2;AN=190;BQB=0.88941;DP=2831;DP4=1371,1262,11,14;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.0794772;MQB=0.922404;MQSB=0.393467;RPB=0.726195;SGB=-9.89872;VDB=0.745749;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.9:1545168 chr09:001545168 0 W/1545168-1545168 FN1319-S Single Base Substitution G-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN765-S.SNP.9:1546949 chr09:001546949 0 W/1546949-1546949 FN765-S Single Base Substitution C-T INTRON HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3628-S.SNP.9:1556132 chr09:001556132 0 W/1556132-1556132 FN3628-S SNP G -> A AC=1;AN=190;BQB=0.99908;DP=3024;DP4=1606,1321,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.18852e-07;MQSB=0.925968;RPB=0.999999;SGB=53.6492;VDB=0.0495844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E407K|523|LOC_Os09g03220|protein_coding|CODING|LOC_Os09g03220.1|2|1) FN1443-S.SNP.9:1558067 chr09:001558067 0 W/1558067-1558067 FN1443-S Single Base Substitution C-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1414-S.SNP.9:1560619 chr09:001560619 0 W/1560619-1560619 FN1414-S Single Base Substitution C-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN3366-S.SNP.9:1564880 chr09:001564880 0 W/1564880-1564880 FN3366-S SNP C -> T AC=2;AN=184;BQB=0.996319;DP=3452;DP4=1768,1492,20,25;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.0144844;MQB=0.000198513;MQSB=0.956634;RPB=0.977031;SGB=148.445;VDB=0.0813995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.9:1568799 chr09:001568799 0 W/1568799-1568799 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.860956;DP=2906;DP4=1449,1361,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.62287e-07;MQSB=0.964807;RPB=0.994279;SGB=60.1755;VDB=0.039586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T378I|628|LOC_Os09g03260|protein_coding|CODING|LOC_Os09g03260.1|2|1) FN4203-S.SNP.9:1580032 chr09:001580032 0 W/1580032-1580032 FN4203-S SNP C -> T AC=2;AN=170;BQB=0.99977;DP=2409;DP4=1093,1215,19,17;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00083022;MQB=2.51505e-07;MQSB=0.940109;RPB=0.614732;SGB=154.496;VDB=0.867779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A38V|791|LOC_Os09g03290|protein_coding|CODING|LOC_Os09g03290.1|1|1) FN470-S.SNP.9:1588484 chr09:001588484 0 W/1588484-1588484 FN470-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g03300 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1340-S.SNP.9:1589119 chr09:001589119 0 W/1589119-1589119 FN1340-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g03300 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN4108-S.SNP.9:1601570 chr09:001601570 0 W/1601570-1601570 FN4108-S SNP G -> A AC=1;AN=182;BQB=0.988844;DP=2183;DP4=950,1057,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00366468;MQB=0.00225899;MQSB=2.61741e-08;RPB=0.96855;SGB=35.0899;VDB=0.478362;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.9:1605038 chr09:001605038 0 W/1605038-1605038 FN806-S Single Base Substitution G-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1606-S.SNP.9:1605135 chr09:001605135 0 W/1605135-1605135 FN1606-S Single Base Substitution G-T INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN769-S.SNP.9:1606559 chr09:001606559 0 W/1606559-1606559 FN769-S Single Base Substitution A-T INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN75-S-S.SNP.9:1608865 chr09:001608865 0 W/1608865-1608865 FN75-S-S SNP C -> G AC=1;AN=190;BQB=0.789971;DP=4719;DP4=1845,2464,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91241e-07;MQSB=0.00352169;RPB=0.996779;SGB=39.6545;VDB=0.798635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.9:1610552 chr09:001610552 0 W/1610552-1610552 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.808592;DP=6936;DP4=2924,3498,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00201845;MQB=5.61898e-08;MQSB=0.993869;RPB=0.620118;SGB=63.0809;VDB=0.347452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.9:1616114 chr09:001616114 0 W/1616114-1616114 FN2639-S SNP C -> A AC=1;AN=200;BQB=0.525908;DP=9689;DP4=4641,4556,12,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00175457;MQB=0.151511;MQSB=0.54446;RPB=0.162323;SGB=-8.26887;VDB=0.833635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.9:1618274 chr09:001618274 0 W/1618274-1618274 FN3761-S SNP G -> A AC=1;AN=190;BQB=0.936081;DP=2609;DP4=1079,1437,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00229973;MQB=0.761824;MQSB=0.667218;RPB=0.753734;SGB=18.3316;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.9:1621678 chr09:001621678 0 W/1621678-1621678 FN1373-S Single Base Substitution C-A INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2257-S.SNP.9:1623124 chr09:001623124 0 W/1623124-1623124 FN2257-S SNP G -> T AC=1;AN=190;BQB=0.753139;DP=4865;DP4=2071,2452,17,17;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0166495;MQB=5.30777e-10;MQSB=0.146125;RPB=0.701397;SGB=33.6348;VDB=0.515537;EFF=INTERGENIC(MODIFIER||||||||||1) FN990-S.SNP.9:1626102 chr09:001626102 0 W/1626102-1626102 FN990-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g03350 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN1460-S.SNP.9:1626726 chr09:001626726 0 W/1626726-1626726 FN1460-S Single Base Substitution C-T INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN4151-S.SNP.9:1627212 chr09:001627212 0 W/1627212-1627212 FN4151-S SNP G -> T AC=2;AN=170;BQB=0.946867;DP=2488;DP4=1168,1203,14,20;HOB=0.0232526;ICB=0.494188;MQ=43;MQ0F=0.00844051;MQB=0.829022;MQSB=0.000147228;RPB=0.66844;SGB=145.61;VDB=0.757522;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.9:1629209 chr09:001629209 0 W/1629209-1629209 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.709862;DP=2138;DP4=978,1028,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00358428;MQSB=0.872281;RPB=0.669318;SGB=30.1021;VDB=0.943745;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.9:1629509 chr09:001629509 0 W/1629509-1629509 FN4325-S SNP C -> T AC=2;AN=170;BQB=0.944033;DP=1950;DP4=807,1010,8,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.74385e-08;MQSB=0.941976;RPB=0.816813;SGB=61.2001;VDB=0.474291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:1634179 chr09:001634179 0 W/1634179-1634179 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1029-S.SNP.9:1635409 chr09:001635409 0 W/1635409-1635409 FN1029-S Single Base Substitution C-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-346.SNP.9:1638140 chr09:001638140 0 W/1638140-1638140 FN-346 Single Base Substitution A-G UTR_3_PRIME HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN4083-S.SNP.9:1640082 chr09:001640082 0 W/1640082-1640082 FN4083-S SNP A -> G AC=2;AN=182;BQB=0.959332;DP=2720;DP4=1470,1130,24,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.4027e-25;MQSB=0.729685;RPB=0.244639;SGB=187.503;VDB=0.324326;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.9:1640082 chr09:001640082 0 W/1640082-1640082 FN875-S Single Base Substitution A-G INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN-101.SNP.9:1642574 chr09:001642574 0 W/1642574-1642574 FN-101 Single Base Substitution G-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-252.SNP.9:1646558 chr09:001646558 0 W/1646558-1646558 FN-252 Single Base Substitution T-G INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2715-S.SNP.9:1649877 chr09:001649877 0 W/1649877-1649877 FN2715-S SNP G -> T AC=2;AN=200;BQB=0.826516;DP=5053;DP4=2330,2315,23,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.74502e-23;MQSB=0.979944;RPB=0.993199;SGB=173.999;VDB=0.923049;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.9:1655843 chr09:001655843 0 W/1655843-1655843 FN-123 Single Base Substitution T-C INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3923-S.SNP.9:1656145 chr09:001656145 0 W/1656145-1656145 FN3923-S SNP T -> C AC=1;AN=158;BQB=0.952959;DP=2273;DP4=1191,1009,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.58585e-06;MQSB=0.972459;RPB=0.576679;SGB=38.3284;VDB=0.144519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.9:1656772 chr09:001656772 0 W/1656772-1656772 FN3478-S SNP T -> G AC=1;AN=184;BQB=0.997334;DP=2512;DP4=1155,1273,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.16824e-10;MQSB=0.997539;RPB=0.715186;SGB=42.7914;VDB=0.87469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.9:1656830 chr09:001656830 0 W/1656830-1656830 FN2265-S SNP G -> C AC=1;AN=190;BQB=0.877937;DP=4986;DP4=2232,2459,9,30;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.14236e-21;MQSB=0.974938;RPB=0.998818;SGB=41.4042;VDB=0.364262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.9:1667707 chr09:001667707 0 W/1667707-1667707 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.903313;DP=5409;DP4=2779,2334,17,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2038e-13;MQSB=0.925007;RPB=0.944142;SGB=82.301;VDB=0.0893139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.9:1671436 chr09:001671436 0 W/1671436-1671436 FN3393-S SNP G -> A AC=2;AN=184;BQB=0.813557;DP=2903;DP4=1392,1407,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.53449e-13;MQSB=0.99918;RPB=0.905122;SGB=84.9167;VDB=0.614437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.9:1672048 chr09:001672048 0 W/1672048-1672048 FN2082-S SNP T -> A AC=1;AN=168;BQB=0.999196;DP=3815;DP4=1821,1958,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.63869e-12;MQSB=0.994106;RPB=0.958605;SGB=-41.7816;VDB=0.785993;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.9:1672863 chr09:001672863 0 W/1672863-1672863 FN-292 Single Base Substitution G-C INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-292.SNP.9:1672874 chr09:001672874 0 W/1672874-1672874 FN-292 Single Base Substitution T-A INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN936-S.SNP.9:1677537 chr09:001677537 0 W/1677537-1677537 FN936-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g03400 retrotransposon protein, putative, unclassified, expressed SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3343-S.SNP.9:1678163 chr09:001678163 0 W/1678163-1678163 FN3343-S SNP C -> T AC=2;AN=184;BQB=0.991769;DP=3279;DP4=1867,1306,18,13;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.128088;MQB=0.930841;MQSB=4.97006e-40;RPB=0.644352;SGB=134.656;VDB=0.0721581;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.9:1678299 chr09:001678299 0 W/1678299-1678299 FN3559-S SNP C -> G AC=1;AN=188;BQB=0.604848;DP=2738;DP4=1194,1415,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.202703;MQB=0.456338;MQSB=0;RPB=0.937061;SGB=43.0708;VDB=0.858768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.9:1684862 chr09:001684862 0 W/1684862-1684862 FN1538-S Single Base Substitution A-T SYNONYMOUS_CODING Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN1538-S.SNP.9:1684863 chr09:001684863 0 W/1684863-1684863 FN1538-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g03410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3675-S.SNP.9:1685101 chr09:001685101 0 W/1685101-1685101 FN3675-S SNP T -> C AC=1;AN=190;BQB=0.200753;DP=3065;DP4=1596,1362,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000326264;MQB=1.27009e-07;MQSB=0.908345;RPB=0.99184;SGB=4.11111;VDB=0.91883;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I70V|502|LOC_Os09g03410|protein_coding|CODING|LOC_Os09g03410.1|1|1) FN3632-S.SNP.9:1687017 chr09:001687017 0 W/1687017-1687017 FN3632-S SNP T -> A AC=1;AN=190;BQB=0.988301;DP=2796;DP4=1340,1325,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0565093;MQB=0.404374;MQSB=5.90796e-16;RPB=0.437181;SGB=10.8904;VDB=0.086416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.9:1690320 chr09:001690320 0 W/1690320-1690320 FN2573-S SNP G -> A AC=1;AN=198;BQB=0.360837;DP=6464;DP4=3256,2792,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0620359;MQB=0.96599;MQSB=0.814047;RPB=0.699052;SGB=50.9344;VDB=0.633098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R792H|1736|LOC_Os09g03420|protein_coding|CODING|LOC_Os09g03420.1|3|1) FN3716-S.SNP.9:1701484 chr09:001701484 0 W/1701484-1701484 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.923602;DP=2449;DP4=1037,1304,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78965e-05;MQSB=0.0541252;RPB=0.827064;SGB=35.4339;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.9:1706465 chr09:001706465 0 W/1706465-1706465 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.957448;DP=2926;DP4=1425,1369,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25108e-16;MQSB=0.991653;RPB=0.680983;SGB=61.9679;VDB=0.0808024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.9:1706474 chr09:001706474 0 W/1706474-1706474 FN1233-S Single Base Substitution C-G INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1545-S.SNP.9:1706767 chr09:001706767 0 W/1706767-1706767 FN1545-S Single Base Substitution C-T INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN4234-S.SNP.9:1708093 chr09:001708093 0 W/1708093-1708093 FN4234-S SNP C -> T AC=2;AN=170;BQB=0.675703;DP=2629;DP4=1352,1155,14,12;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0;MQB=6.31836e-11;MQSB=0.111498;RPB=0.837899;SGB=110.069;VDB=0.563269;EFF=INTRON(MODIFIER||||1138|LOC_Os09g03470|protein_coding|CODING|LOC_Os09g03470.1|1|1) FN4114-S.SNP.9:1715492 chr09:001715492 0 W/1715492-1715492 FN4114-S SNP C -> T AC=1;AN=182;BQB=0.889304;DP=2615;DP4=1160,1389,3,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000848079;MQSB=0.982987;RPB=0.997026;SGB=26.0691;VDB=0.61301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.9:1716936 chr09:001716936 0 W/1716936-1716936 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.102713;DP=3585;DP4=1554,1726,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.26401e-05;MQSB=0.545619;RPB=0.976289;SGB=-16.5452;VDB=0.0903002;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.9:1717901 chr09:001717901 0 W/1717901-1717901 FN-207 Single Base Substitution C-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3431-S.SNP.9:1718590 chr09:001718590 0 W/1718590-1718590 FN3431-S SNP G -> A AC=2;AN=184;BQB=0.319032;DP=2704;DP4=1428,1199,4,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=0.000550253;MQSB=0.887573;RPB=0.674849;SGB=21.6609;VDB=0.95458;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.9:1719934 chr09:001719934 0 W/1719934-1719934 FN517-S Single Base Substitution C-T INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN-164.SNP.9:1721287 chr09:001721287 0 W/1721287-1721287 FN-164 Single Base Substitution C-T INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1661-S.SNP.9:1726842 chr09:001726842 0 W/1726842-1726842 FN1661-S Single Base Substitution C-T INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1577-S.SNP.9:1728165 chr09:001728165 0 W/1728165-1728165 FN1577-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g03500 ZOS9-01 - C2H2 zinc finger protein, expressed SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2205-S.SNP.9:1729623 chr09:001729623 0 W/1729623-1729623 FN2205-S SNP T -> A AC=1;AN=190;BQB=0.298833;DP=5063;DP4=2278,2444,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.67841e-17;MQSB=0.899649;RPB=0.357336;SGB=92.9626;VDB=0.367713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.9:1732438 chr09:001732438 0 W/1732438-1732438 FN2304 SNP C -> T AC=1;AN=192;BQB=0.24295;DP=4734;DP4=2305,2157,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000422476;MQB=1.75983e-20;MQSB=0.955539;RPB=0.398895;SGB=114.631;VDB=0.757924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.9:1739035 chr09:001739035 0 W/1739035-1739035 FN2325 SNP A -> C AC=2;AN=192;BQB=0.393615;DP=4512;DP4=2192,2100,20,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00132979;MQB=5.50455e-18;MQSB=0.983927;RPB=0.994759;SGB=82.7652;VDB=0.777686;EFF=INTRON(MODIFIER||||121|LOC_Os09g03530|protein_coding|CODING|LOC_Os09g03530.1|1|1) FN1249-S.SNP.9:1740826 chr09:001740826 0 W/1740826-1740826 FN1249-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN568-S.SNP.9:1767097 chr09:001767097 0 W/1767097-1767097 FN568-S Single Base Substitution C-A INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1046-S.SNP.9:1767768 chr09:001767768 0 W/1767768-1767768 FN1046-S Single Base Substitution G-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN2264-S.SNP.9:1772186 chr09:001772186 0 W/1772186-1772186 FN2264-S SNP G -> A AC=1;AN=190;BQB=0.135037;DP=4559;DP4=2251,2071,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.94311e-08;MQSB=0.979819;RPB=0.80523;SGB=23.6597;VDB=0.601779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A190V|966|LOC_Os09g03590|protein_coding|CODING|LOC_Os09g03590.1|3|1) FN-75.SNP.9:1773557 chr09:001773557 0 W/1773557-1773557 FN-75 Single Base Substitution T-C INTRON HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1318-S.SNP.9:1780391 chr09:001780391 0 W/1780391-1780391 FN1318-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g03600 immunoglobulin/major histocompatibility complex, putative, expressed SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1327-S.SNP.9:1787702 chr09:001787702 0 W/1787702-1787702 FN1327-S Single Base Substitution A-C INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN574-S.SNP.9:1795351 chr09:001795351 0 W/1795351-1795351 FN574-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2626-S.SNP.9:1806494 chr09:001806494 0 W/1806494-1806494 FN2626-S SNP C -> A AC=1;AN=200;BQB=0.959973;DP=5027;DP4=2591,2199,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12752e-07;MQSB=0.986522;RPB=0.881829;SGB=33.0593;VDB=0.343518;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P208|526|LOC_Os09g03620|protein_coding|CODING|LOC_Os09g03620.1|3|1) FN476-S.SNP.9:1810465 chr09:001810465 0 W/1810465-1810465 FN476-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-410.SNP.9:1818973 chr09:001818973 0 W/1818973-1818973 FN-410 Single Base Substitution T-C INTRON HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.9:1818973 chr09:001818973 0 W/1818973-1818973 FN410-S Single Base Substitution T-C INTRON HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN1080-S.SNP.9:1826990 chr09:001826990 0 W/1826990-1826990 FN1080-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g03640 expressed protein SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3368-S.SNP.9:1831684 chr09:001831684 0 W/1831684-1831684 FN3368-S SNP C -> A AC=1;AN=184;BQB=0.926744;DP=3720;DP4=1972,1649,10,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54021e-12;MQSB=0.971229;RPB=0.721673;SGB=107.526;VDB=0.250954;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.9:1832644 chr09:001832644 0 W/1832644-1832644 FN_N1-26-1 Single Base Substitution C-A HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN4080-S.SNP.9:1843119 chr09:001843119 0 W/1843119-1843119 FN4080-S SNP C -> A AC=1;AN=182;BQB=0.716418;DP=2870;DP4=1269,1528,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00383275;MQB=0.00014379;MQSB=0.399877;RPB=0.919976;SGB=35.6277;VDB=0.643899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.9:1843646 chr09:001843646 0 W/1843646-1843646 FN2614-S SNP C -> A AC=1;AN=198;BQB=0.628144;DP=4299;DP4=1938,2099,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00418702;MQB=1.06428e-10;MQSB=0.0680349;RPB=0.0305786;SGB=-36.6405;VDB=0.223881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.9:1844948 chr09:001844948 0 W/1844948-1844948 FN1220-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN3852-S.SNP.9:1846002 chr09:001846002 0 W/1846002-1846002 FN3852-S SNP G -> T AC=2;AN=158;BQB=0.633197;DP=2101;DP4=999,1005,14,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.33873e-18;MQSB=0.955513;RPB=0.902715;SGB=121.348;VDB=0.781353;EFF=INTRON(MODIFIER||||170|LOC_Os09g03670|protein_coding|CODING|LOC_Os09g03670.1|1|1) FN2381.SNP.9:1846496 chr09:001846496 0 W/1846496-1846496 FN2381 SNP G -> T AC=1;AN=192;BQB=0.970321;DP=4814;DP4=2292,2283,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000207727;MQB=1.14062e-08;MQSB=0.982337;RPB=0.979758;SGB=58.3392;VDB=0.775643;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.9:1848637 chr09:001848637 0 W/1848637-1848637 FN1314-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN942-S.SNP.9:1848647 chr09:001848647 0 W/1848647-1848647 FN942-S Single Base Substitution C-G INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN-182.SNP.9:1848833 chr09:001848833 0 W/1848833-1848833 FN-182 Single Base Substitution C-T INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3784-S.SNP.9:1849624 chr09:001849624 0 W/1849624-1849624 FN3784-S SNP G -> A AC=1;AN=190;BQB=0.533443;DP=2676;DP4=1231,1307,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.49264e-07;MQSB=0.887678;RPB=0.6343;SGB=25.439;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3784-S.SNP.9:1849626 chr09:001849626 0 W/1849626-1849626 FN3784-S SNP G -> A AC=1;AN=190;BQB=0.689952;DP=2660;DP4=1239,1321,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22554e-05;MQSB=0.889804;RPB=0.498281;SGB=30.8803;VDB=0.559284;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.9:1850320 chr09:001850320 0 W/1850320-1850320 W674-4-1 Single Base Substitution C-T INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3626-S.SNP.9:1859183 chr09:001859183 0 W/1859183-1859183 FN3626-S SNP G -> A AC=2;AN=190;BQB=0.996514;DP=2341;DP4=1194,1030,15,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.64591e-19;MQSB=0.994452;RPB=0.986618;SGB=104.829;VDB=0.669781;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F23|405|LOC_Os09g03680|protein_coding|CODING|LOC_Os09g03680.1|1|1) FN3678-S.SNP.9:1859636 chr09:001859636 0 W/1859636-1859636 FN3678-S SNP T -> A AC=1;AN=190;BQB=0.84739;DP=2953;DP4=1593,1247,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18711e-06;MQSB=0.563211;RPB=0.299265;SGB=21.1058;VDB=0.0675125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.9:1859835 chr09:001859835 0 W/1859835-1859835 FN3697-S SNP A -> G AC=2;AN=190;BQB=0.992976;DP=2634;DP4=1271,1199,18,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.38788e-19;MQSB=0.999529;RPB=0.152836;SGB=114.286;VDB=0.928159;EFF=INTERGENIC(MODIFIER||||||||||1) FN4178-S.SNP.9:1862118 chr09:001862118 0 W/1862118-1862118 FN4178-S SNP T -> C AC=1;AN=170;BQB=0.844202;DP=2411;DP4=1200,979,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.40423e-07;MQSB=0.835782;RPB=0.323831;SGB=19.8839;VDB=0.0973869;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R54|214|LOC_Os09g03690|protein_coding|CODING|LOC_Os09g03690.1|1|1) FN4178-S.SNP.9:1862120 chr09:001862120 0 W/1862120-1862120 FN4178-S SNP T -> C AC=1;AN=170;BQB=0.990508;DP=2412;DP4=1204,947,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.25856e-08;MQSB=0.922614;RPB=0.539274;SGB=1.44716;VDB=0.412929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L55P|214|LOC_Os09g03690|protein_coding|CODING|LOC_Os09g03690.1|1|1) FN3838-S.SNP.9:1862146 chr09:001862146 0 W/1862146-1862146 FN3838-S SNP G -> A AC=2;AN=190;BQB=0.98794;DP=2487;DP4=1433,878,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.47927e-13;MQSB=0.728638;RPB=0.996681;SGB=82.301;VDB=0.920204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A64T|214|LOC_Os09g03690|protein_coding|CODING|LOC_Os09g03690.1|1|1) FN813-S.SNP.9:1876004 chr09:001876004 0 W/1876004-1876004 FN813-S Single Base Substitution C-A INTERGENIC HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1596-S.SNP.9:1900784 chr09:001900784 0 W/1900784-1900784 FN1596-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1633-S.SNP.9:1903509 chr09:001903509 0 W/1903509-1903509 FN1633-S Single Base Substitution C-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2740-S.SNP.9:1905449 chr09:001905449 0 W/1905449-1905449 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.852198;DP=5399;DP4=2632,2468,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.45358e-16;MQSB=0.997739;RPB=0.998109;SGB=23.9365;VDB=0.552652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.9:1907374 chr09:001907374 0 W/1907374-1907374 FN4140-S SNP G -> A AC=2;AN=170;BQB=0.914669;DP=2813;DP4=1409,1315,15,16;HOB=0.0232526;ICB=0.494188;MQ=40;MQ0F=0.0199076;MQB=0.999737;MQSB=9.94827e-07;RPB=0.876877;SGB=132.282;VDB=0.292772;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.9:1911895 chr09:001911895 0 W/1911895-1911895 FN-216 Single Base Substitution T-C INTERGENIC HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3529-S.SNP.9:1915004 chr09:001915004 0 W/1915004-1915004 FN3529-S SNP T -> G AC=1;AN=188;BQB=0.685906;DP=2335;DP4=1143,1066,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72499e-07;MQSB=0.688782;RPB=0.982674;SGB=28.8977;VDB=0.566422;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.9:1915710 chr09:001915710 0 W/1915710-1915710 FN860-S Single Base Substitution G-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN789-S.SNP.9:1919949 chr09:001919949 0 W/1919949-1919949 FN789-S Single Base Substitution C-A INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN-293.SNP.9:1921121 chr09:001921121 0 W/1921121-1921121 FN-293 Single Base Substitution C-G INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1514-S.SNP.9:1922593 chr09:001922593 0 W/1922593-1922593 FN1514-S Single Base Substitution T-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1179-S.SNP.9:1922770 chr09:001922770 0 W/1922770-1922770 FN1179-S Single Base Substitution C-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN-279.SNP.9:1923851 chr09:001923851 0 W/1923851-1923851 FN-279 Single Base Substitution A-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2725-S.SNP.9:1926523 chr09:001926523 0 W/1926523-1926523 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.95099;DP=4924;DP4=2082,2586,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34944e-09;MQSB=0.986031;RPB=0.68688;SGB=-15.5309;VDB=0.868407;EFF=INTRON(MODIFIER||||196|LOC_Os09g03800|protein_coding|CODING|LOC_Os09g03800.1|2|1) FN2572-S.SNP.9:1926886 chr09:001926886 0 W/1926886-1926886 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.0730213;DP=4153;DP4=1971,1838,24,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.27434e-25;MQSB=0.589783;RPB=0.266349;SGB=5.80318;VDB=0.860816;EFF=INTRON(MODIFIER||||196|LOC_Os09g03800|protein_coding|CODING|LOC_Os09g03800.1|2|1) FN2572-S.SNP.9:1926886 chr09:001926886 0 W/1926886-1926886 FN2572-S Single Base Substitution C-A INTRON HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2572-S.SNP.9:1926892 chr09:001926892 0 W/1926892-1926892 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.983722;DP=4158;DP4=1986,1904,23,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50334e-25;MQSB=0.590161;RPB=0.988115;SGB=178.212;VDB=0.737509;EFF=INTRON(MODIFIER||||196|LOC_Os09g03800|protein_coding|CODING|LOC_Os09g03800.1|2|1) FN2572-S.SNP.9:1926892 chr09:001926892 0 W/1926892-1926892 FN2572-S Single Base Substitution C-A INTRON HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN432-S.SNP.9:1931101 chr09:001931101 0 W/1931101-1931101 FN432-S Single Base Substitution T-G INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2211-S.SNP.9:1933489 chr09:001933489 0 W/1933489-1933489 FN2211-S SNP T -> G AC=2;AN=190;BQB=0.75665;DP=5054;DP4=2220,2487,26,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.429e-28;MQSB=0.918371;RPB=0.702453;SGB=188.917;VDB=0.207951;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.9:1938462 chr09:001938462 0 W/1938462-1938462 FN1263-S Single Base Substitution G-A INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN427-S.SNP.9:1939001 chr09:001939001 0 W/1939001-1939001 FN427-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g03820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1076-S.SNP.9:1941112 chr09:001941112 0 W/1941112-1941112 FN1076-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g03830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3551-S.SNP.9:1952212 chr09:001952212 0 W/1952212-1952212 FN3551-S SNP A -> T AC=1;AN=188;BQB=0.859877;DP=2669;DP4=1274,1269,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.46159e-07;MQSB=0.631891;RPB=0.498177;SGB=28.8977;VDB=0.746774;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.9:1952422 chr09:001952422 0 W/1952422-1952422 FN869-S Single Base Substitution T-C INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2422.SNP.9:1953700 chr09:001953700 0 W/1953700-1953700 FN2422 SNP C -> T AC=1;AN=200;BQB=0.98603;DP=4313;DP4=2221,1767,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20151e-09;MQSB=0.847137;RPB=0.406075;SGB=29.4849;VDB=0.233523;EFF=SPLICE_SITE_REGION(LOW||||1163|LOC_Os09g03860|protein_coding|CODING|LOC_Os09g03860.1|5|1),INTRON(MODIFIER||||1163|LOC_Os09g03860|protein_coding|CODING|LOC_Os09g03860.1|5|1) FN1439-S.SNP.9:1954234 chr09:001954234 0 W/1954234-1954234 FN1439-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g03860 retrotransposon protein, putative, unclassified, expressed SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN873-S.SNP.9:1957343 chr09:001957343 0 W/1957343-1957343 FN873-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-59.SNP.9:1958013 chr09:001958013 0 W/1958013-1958013 FN-59 Single Base Substitution C-A INTRON HOMO SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2445.SNP.9:1962450 chr09:001962450 0 W/1962450-1962450 FN2445 SNP C -> T AC=1;AN=200;BQB=0.882333;DP=4916;DP4=2211,2442,10,10;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.00956062;MQB=0.0237371;MQSB=0;RPB=0.410055;SGB=37.3004;VDB=0.582564;EFF=SPLICE_SITE_REGION(LOW||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|4|1),INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|4|1) FN1423-S.SNP.9:1963069 chr09:001963069 0 W/1963069-1963069 FN1423-S Single Base Substitution C-T INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3868-S.SNP.9:1968060 chr09:001968060 0 W/1968060-1968060 FN3868-S SNP A -> C AC=2;AN=158;BQB=0.944133;DP=2583;DP4=1112,1110,14,10;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.0120015;MQB=0.000806445;MQSB=0.0123567;RPB=0.589263;SGB=-42.315;VDB=0.834718;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|10|1) FN2147-S.SNP.9:1969464 chr09:001969464 0 W/1969464-1969464 FN2147-S SNP G -> C AC=1;AN=168;BQB=1.2082e-06;DP=3904;DP4=1608,2092,6,26;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00153689;MQB=0.888325;MQSB=0.235258;RPB=0.238446;SGB=-482.864;VDB=0.0428536;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|11|1) FN3613-S.SNP.9:1969715 chr09:001969715 0 W/1969715-1969715 FN3613-S SNP C -> T AC=1;AN=190;BQB=0.931312;DP=2959;DP4=1251,1544,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.00642109;MQB=0.962004;MQSB=0.0014255;RPB=0.785389;SGB=89.4087;VDB=0.83572;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|11|1) FN2725-S.SNP.9:1969887 chr09:001969887 0 W/1969887-1969887 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.529447;DP=5028;DP4=2276,2436,7,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0177009;MQB=0.0834727;MQSB=7.18767e-06;RPB=0.998959;SGB=51.0851;VDB=0.140428;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|11|1) FN3438-S.SNP.9:1970130 chr09:001970130 0 W/1970130-1970130 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.718776;DP=3209;DP4=1824,1294,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.4849e-11;MQSB=0.119969;RPB=0.48342;SGB=93.9603;VDB=0.0122534;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q438|1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|12|1) FN2181-S.SNP.9:1971522 chr09:001971522 0 W/1971522-1971522 FN2181-S SNP C -> G AC=1;AN=190;BQB=0.796075;DP=4986;DP4=2359,2283,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0152427;MQB=0.0212303;MQSB=0.739182;RPB=0.146636;SGB=31.3213;VDB=0.0618961;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|13|1) FN3762-S.SNP.9:1974111 chr09:001974111 0 W/1974111-1974111 FN3762-S SNP T -> A AC=1;AN=190;BQB=0.95362;DP=3027;DP4=1253,1690,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.11893;MQB=0.994241;MQSB=1.38385e-08;RPB=0.77798;SGB=32.5467;VDB=0.606741;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|18|1) FN1192-S.SNP.9:1975420 chr09:001975420 0 W/1975420-1975420 FN1192-S Single Base Substitution T-G INTRON HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3280-S.SNP.9:1979448 chr09:001979448 0 W/1979448-1979448 FN3280-S SNP G -> A AC=2;AN=184;BQB=0.907756;DP=2852;DP4=1415,1337,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.49079e-12;MQSB=0.819762;RPB=0.834933;SGB=70.9657;VDB=0.413233;EFF=INTRON(MODIFIER||||1886|LOC_Os09g03870|protein_coding|CODING|LOC_Os09g03870.1|26|1) FN1617-S.SNP.9:1992724 chr09:001992724 0 W/1992724-1992724 FN1617-S Single Base Substitution C-T INTRON HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3749-S.SNP.9:1997380 chr09:001997380 0 W/1997380-1997380 FN3749-S SNP G -> A AC=1;AN=190;BQB=0.980955;DP=3001;DP4=1527,1353,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80631e-09;MQSB=0.993371;RPB=0.887128;SGB=76.4186;VDB=0.115259;EFF=INTRON(MODIFIER||||805|LOC_Os09g03900|protein_coding|CODING|LOC_Os09g03900.1|2|1) FN-170.SNP.9:2000481 chr09:002000481 0 W/2000481-2000481 FN-170 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g03910 retrotransposon protein, putative, unclassified, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3998-S.SNP.9:2002675 chr09:002002675 0 W/2002675-2002675 FN3998-S SNP G -> A AC=1;AN=168;BQB=0.930604;DP=2713;DP4=1310,1314,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02475e-09;MQSB=0.814971;RPB=0.817481;SGB=19.7539;VDB=0.841368;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A208V|274|LOC_Os09g03920|protein_coding|CODING|LOC_Os09g03920.1|3|1) FN3998-S.SNP.9:2002676 chr09:002002676 0 W/2002676-2002676 FN3998-S SNP C -> A AC=1;AN=168;BQB=0.997059;DP=2728;DP4=1307,1321,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29441e-09;MQSB=0.902178;RPB=0.8966;SGB=38.1788;VDB=0.817546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A208S|274|LOC_Os09g03920|protein_coding|CODING|LOC_Os09g03920.1|3|1) FN1255-S.SNP.9:2005047 chr09:002005047 0 W/2005047-2005047 FN1255-S Single Base Substitution T-C INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2634-S.SNP.9:2025241 chr09:002025241 0 W/2025241-2025241 FN2634-S SNP G -> T AC=2;AN=200;BQB=0.380518;DP=4879;DP4=2289,2305,37,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6221e-40;MQSB=0.987038;RPB=0.794758;SGB=162.349;VDB=0.0299677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3475-S.SNP.9:2033446 chr09:002033446 0 W/2033446-2033446 FN3475-S SNP T -> G AC=1;AN=184;BQB=0.878882;DP=2876;DP4=1586,1134,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.92546e-08;MQSB=0.967814;RPB=0.999071;SGB=39.2697;VDB=0.0688148;EFF=INTRON(MODIFIER||||161|LOC_Os09g03960|protein_coding|CODING|LOC_Os09g03960.1|3|1) FN4023-S.SNP.9:2034439 chr09:002034439 0 W/2034439-2034439 FN4023-S SNP T -> C AC=1;AN=168;BQB=0.682064;DP=3092;DP4=1188,1628,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.41148e-08;MQSB=0.994469;RPB=0.606975;SGB=41.6096;VDB=0.211126;EFF=INTRON(MODIFIER||||161|LOC_Os09g03960|protein_coding|CODING|LOC_Os09g03960.1|3|1) FN524-S.SNP.9:2037727 chr09:002037727 0 W/2037727-2037727 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN810-S.SNP.9:2043205 chr09:002043205 0 W/2043205-2043205 FN810-S Single Base Substitution C-G INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2330.SNP.9:2043475 chr09:002043475 0 W/2043475-2043475 FN2330 SNP C -> T AC=2;AN=192;BQB=0.819234;DP=4277;DP4=2033,1841,24,16;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.0187047;MQB=0.120551;MQSB=1.60048e-06;RPB=0.984125;SGB=132.453;VDB=0.40599;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.9:2056687 chr09:002056687 0 W/2056687-2056687 FN2215-S SNP A -> T AC=2;AN=190;BQB=0.437075;DP=5649;DP4=2845,2190,20,29;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0692158;MQB=0.974337;MQSB=7.23409e-27;RPB=0.472463;SGB=-317.897;VDB=0.856308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F750Y|839|LOC_Os09g04010|protein_coding|CODING|LOC_Os09g04010.1|5|1) FN414-S.SNP.9:2059577 chr09:002059577 0 W/2059577-2059577 FN414-S Single Base Substitution A-G INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1646-S.SNP.9:2061682 chr09:002061682 0 W/2061682-2061682 FN1646-S Single Base Substitution G-A INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN744-S.SNP.9:2067965 chr09:002067965 0 W/2067965-2067965 FN744-S Single Base Substitution C-T INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1583-S.SNP.9:2072771 chr09:002072771 0 W/2072771-2072771 FN1583-S Single Base Substitution T-A INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1583-S.SNP.9:2072772 chr09:002072772 0 W/2072772-2072772 FN1583-S Single Base Substitution G-A INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN964-S.SNP.9:2079819 chr09:002079819 0 W/2079819-2079819 FN964-S Single Base Substitution T-C INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4038-S.SNP.9:2081378 chr09:002081378 0 W/2081378-2081378 FN4038-S SNP C -> A AC=1;AN=168;BQB=0.996124;DP=2857;DP4=1146,1586,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000700035;MQB=1.5132e-09;MQSB=2.93127e-12;RPB=0.931175;SGB=19.9297;VDB=0.21929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.9:2084917 chr09:002084917 0 W/2084917-2084917 FN3554-S SNP G -> C AC=2;AN=188;BQB=0.987334;DP=2061;DP4=1319,694,15,3;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.06069e-10;MQSB=0.994092;RPB=0.269715;SGB=76.2387;VDB=0.245978;EFF=INTRON(MODIFIER||||347|LOC_Os09g04050|protein_coding|CODING|LOC_Os09g04050.1|3|1) FN2657-S.SNP.9:2093671 chr09:002093671 0 W/2093671-2093671 FN2657-S SNP T -> A AC=1;AN=200;BQB=0.749777;DP=4889;DP4=2147,2515,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.445e-13;MQSB=0.897305;RPB=0.367014;SGB=79.9264;VDB=0.423244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.9:2095217 chr09:002095217 0 W/2095217-2095217 FN-105 Single Base Substitution T-A INTERGENIC HOMO SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN409-S.SNP.9:2110542 chr09:002110542 0 W/2110542-2110542 FN409-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g04080 retrotransposon protein, putative, unclassified, expressed SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN-384.SNP.9:2112488 chr09:002112488 0 W/2112488-2112488 FN-384 Single Base Substitution A-G INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN2749-S.SNP.9:2119509 chr09:002119509 0 W/2119509-2119509 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.959131;DP=4634;DP4=2202,2176,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.41816e-07;MQSB=0.923631;RPB=0.639626;SGB=40.4492;VDB=0.89288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G20S|597|LOC_Os09g04090|protein_coding|CODING|LOC_Os09g04090.1|2|1) FN2673-S.SNP.9:2121420 chr09:002121420 0 W/2121420-2121420 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.928023;DP=4897;DP4=2655,2023,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35225e-11;MQSB=0.585297;RPB=0.334098;SGB=32.0901;VDB=0.0184593;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S344|597|LOC_Os09g04090|protein_coding|CODING|LOC_Os09g04090.1|4|1) FN543-S.SNP.9:2126892 chr09:002126892 0 W/2126892-2126892 FN543-S Single Base Substitution A-C INTRON HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3393-S.SNP.9:2137778 chr09:002137778 0 W/2137778-2137778 FN3393-S SNP C -> T AC=2;AN=184;BQB=0.930455;DP=3532;DP4=1595,1813,12,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.70621e-17;MQSB=0.986079;RPB=0.0410719;SGB=143.7;VDB=0.2739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A133V|186|LOC_Os09g04120|protein_coding|CODING|LOC_Os09g04120.1|2|1) FN3514-S.SNP.9:2144189 chr09:002144189 0 W/2144189-2144189 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.504207;DP=3427;DP4=1726,1640,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.0126397;MQSB=9.4273e-08;RPB=0.913098;SGB=53.5223;VDB=0.884062;EFF=INTRON(MODIFIER||||1328|LOC_Os09g04130|protein_coding|CODING|LOC_Os09g04130.1|5|1) FN2390.SNP.9:2144242 chr09:002144242 0 W/2144242-2144242 FN2390 SNP C -> T AC=2;AN=200;BQB=0.748576;DP=4353;DP4=1923,2104,22,26;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.031932;MQB=0.00457589;MQSB=1.90925e-05;RPB=0.906465;SGB=-310.556;VDB=0.650398;EFF=INTRON(MODIFIER||||1328|LOC_Os09g04130|protein_coding|CODING|LOC_Os09g04130.1|5|1) FN2670-S.SNP.9:2145635 chr09:002145635 0 W/2145635-2145635 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.886302;DP=5014;DP4=2254,2520,15,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.27993e-18;MQSB=0.954164;RPB=0.0763041;SGB=71.1676;VDB=0.0124216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1018L|1328|LOC_Os09g04130|protein_coding|CODING|LOC_Os09g04130.1|9|1) FN1697-S.SNP.9:2149952 chr09:002149952 0 W/2149952-2149952 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.799813;DP=3609;DP4=1477,2094,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.55005e-07;MQSB=0.958293;RPB=0.460133;SGB=58.0655;VDB=0.355325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.9:2151298 chr09:002151298 0 W/2151298-2151298 FN1697-S SNP A -> C AC=1;AN=188;BQB=0.23765;DP=2662;DP4=1287,1353,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=29;MQ0F=0.170924;MQB=0.992716;MQSB=0;RPB=0.513284;SGB=32.441;VDB=0.698506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.9:2151310 chr09:002151310 0 W/2151310-2151310 FN3877-S SNP C -> T AC=2;AN=158;BQB=0.981521;DP=2335;DP4=1200,1044,13,17;HOB=0.024996;ICB=0.493752;MQ=32;MQ0F=0.100642;MQB=0.54578;MQSB=0;RPB=0.878925;SGB=125.717;VDB=0.932581;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.9:2153130 chr09:002153130 0 W/2153130-2153130 FN2559-S SNP C -> T AC=2;AN=198;BQB=0.969672;DP=3540;DP4=1295,1855,6,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.34528e-06;MQSB=0.997311;RPB=0.970183;SGB=54.144;VDB=0.772703;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.9:2156927 chr09:002156927 0 W/2156927-2156927 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.120234;DP=4482;DP4=1961,2258,5,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.05333e-11;MQSB=0.967114;RPB=0.134534;SGB=81.8956;VDB=0.420753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A332V|469|LOC_Os09g04150|protein_coding|CODING|LOC_Os09g04150.1|3|1) FN456-S.SNP.9:2157199 chr09:002157199 0 W/2157199-2157199 FN456-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-213.SNP.9:2158060 chr09:002158060 0 W/2158060-2158060 FN-213 Single Base Substitution C-T INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2596-S.SNP.9:2159018 chr09:002159018 0 W/2159018-2159018 FN2596-S SNP G -> T AC=1;AN=198;BQB=0.99968;DP=4081;DP4=1833,2050,7,16;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.090174;MQB=0.743253;MQSB=0.000263071;RPB=0.72958;SGB=17.325;VDB=0.0760893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.9:2160436 chr09:002160436 0 W/2160436-2160436 FN2573-S SNP C -> T AC=1;AN=198;BQB=0.993927;DP=4516;DP4=2050,2117,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0418512;MQB=0.0207183;MQSB=2.24862e-15;RPB=0.307158;SGB=-333.19;VDB=0.952596;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.9:2160791 chr09:002160791 0 W/2160791-2160791 FN4312-S SNP G -> A AC=2;AN=170;BQB=0.745051;DP=1762;DP4=866,755,5,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00113507;MQB=1.99188e-06;MQSB=0.561781;RPB=0.911491;SGB=52.3148;VDB=0.0950632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.9:2163784 chr09:002163784 0 W/2163784-2163784 FN2213-S SNP C -> T AC=1;AN=190;BQB=0.289937;DP=1940;DP4=768,930,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00309278;MQB=8.06284e-05;MQSB=0.0047688;RPB=0.989528;SGB=53.6492;VDB=0.532627;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.9:2172131 chr09:002172131 0 W/2172131-2172131 FN-234 Single Base Substitution A-G INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN1030-S.SNP.9:2174389 chr09:002174389 0 W/2174389-2174389 FN1030-S Single Base Substitution G-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN550-S.SNP.9:2175119 chr09:002175119 0 W/2175119-2175119 FN550-S Single Base Substitution G-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN3489-S.SNP.9:2177354 chr09:002177354 0 W/2177354-2177354 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.263629;DP=2533;DP4=1187,1246,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.54038e-05;MQSB=0.958121;RPB=0.972603;SGB=66.8296;VDB=0.529791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.9:2178080 chr09:002178080 0 W/2178080-2178080 FN3287-S SNP T -> G AC=1;AN=184;BQB=0.828471;DP=3086;DP4=1523,1463,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.48379e-13;MQSB=0.969722;RPB=0.265206;SGB=48.493;VDB=0.915564;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.9:2180782 chr09:002180782 0 W/2180782-2180782 FN-409 Single Base Substitution G-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN-409.SNP.9:2180783 chr09:002180783 0 W/2180783-2180783 FN-409 Single Base Substitution A-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN469-S.SNP.9:2182220 chr09:002182220 0 W/2182220-2182220 FN469-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN697-S.SNP.9:2187873 chr09:002187873 0 W/2187873-2187873 FN697-S Single Base Substitution A-G INTERGENIC HOMO SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN-211.SNP.9:2188442 chr09:002188442 0 W/2188442-2188442 FN-211 Single Base Substitution C-T INTERGENIC HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1541-S.SNP.9:2189299 chr09:002189299 0 W/2189299-2189299 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. W674-4-1.SNP.9:2190190 chr09:002190190 0 W/2190190-2190190 W674-4-1 Single Base Substitution C-T INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3551-S.SNP.9:2199818 chr09:002199818 0 W/2199818-2199818 FN3551-S SNP G -> A AC=1;AN=188;BQB=0.323829;DP=3948;DP4=1591,2264,9,17;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.130952;MQB=0.00816712;MQSB=0;RPB=0.922056;SGB=-345.484;VDB=0.985944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.9:2203333 chr09:002203333 0 W/2203333-2203333 FN3819-S SNP C -> G AC=2;AN=190;BQB=0.642239;DP=1802;DP4=980,732,16,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.17896e-09;MQSB=0.144751;RPB=0.333124;SGB=75.1932;VDB=0.0685638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.9:2205532 chr09:002205532 0 W/2205532-2205532 FN2284 SNP C -> T AC=1;AN=192;BQB=0.866467;DP=4486;DP4=2059,2129,9,16;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00133749;MQB=4.17567e-12;MQSB=0.601906;RPB=0.201741;SGB=49.4287;VDB=0.698839;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P49L|542|LOC_Os09g04190|protein_coding|CODING|LOC_Os09g04190.1|1|1) FN-278.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN-278 Single Base Substitution T-C INTRON HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-342.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN-342 Single Base Substitution T-C INTRON HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1058-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN1058-S Single Base Substitution T-C INTRON HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1307-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN1307-S Single Base Substitution T-C INTRON HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2084-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN2084-S SNP T -> C AC=2;AN=168;BQB=0.00444169;DP=3516;DP4=1768,1648,9,21;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000284414;MQB=2.62683e-06;MQSB=0.488913;RPB=0.738666;SGB=-285.602;VDB=0.0948535;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN2469.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN2469 SNP T -> C AC=2;AN=200;BQB=0.157316;DP=3277;DP4=1118,1832,4,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000305157;MQB=2.28072e-06;MQSB=0.965144;RPB=0.990699;SGB=14.3054;VDB=0.481185;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN2724-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN2724-S SNP T -> C AC=2;AN=200;BQB=0.746602;DP=4067;DP4=1618,2121,15,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000491763;MQB=4.05017e-09;MQSB=0.999554;RPB=0.67162;SGB=45.1159;VDB=0.0131301;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN3288-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN3288-S SNP T -> C AC=1;AN=184;BQB=0.773536;DP=1981;DP4=674,1120,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000504796;MQB=0.00724307;MQSB=0.554344;RPB=0.265858;SGB=21.6609;VDB=0.0348255;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN3592-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN3592-S SNP T -> C AC=2;AN=188;BQB=0.401722;DP=1959;DP4=784,1001,7,13;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000510465;MQB=3.70425e-06;MQSB=0.927587;RPB=0.57697;SGB=36.2493;VDB=0.00698754;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN3883-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN3883-S SNP T -> C AC=2;AN=158;BQB=0.0624197;DP=1452;DP4=459,856,4,10;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000688705;MQB=0.0067847;MQSB=0.998673;RPB=0.696877;SGB=-36.0095;VDB=0.444984;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN4134-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN4134-S SNP T -> C AC=2;AN=182;BQB=0.602973;DP=1639;DP4=499,1007,2,11;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.000610128;MQB=0.000806861;MQSB=0.78548;RPB=0.911607;SGB=35.6277;VDB=0.532627;EFF=INTRON(MODIFIER||||234|LOC_Os09g04200|protein_coding|CODING|LOC_Os09g04200.1|5|1) FN983-S.SNP.9:2208603 chr09:002208603 0 W/2208603-2208603 FN983-S Single Base Substitution T-C INTRON HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3979-S.SNP.9:2210687 chr09:002210687 0 W/2210687-2210687 FN3979-S SNP C -> T AC=1;AN=168;BQB=0.143896;DP=2597;DP4=1114,1343,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.7604e-05;MQSB=0.92218;RPB=0.85539;SGB=48.4712;VDB=0.9549;EFF=INTERGENIC(MODIFIER||||||||||1) FN896-S.SNP.9:2211028 chr09:002211028 0 W/2211028-2211028 FN896-S Single Base Substitution G-T INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN896-S.SNP.9:2211030 chr09:002211030 0 W/2211030-2211030 FN896-S Single Base Substitution A-T INTERGENIC HOMO SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2316.SNP.9:2220454 chr09:002220454 0 W/2220454-2220454 FN2316 SNP C -> T AC=1;AN=192;BQB=0.477463;DP=4747;DP4=2318,2129,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61451e-16;MQSB=0.77581;RPB=0.701953;SGB=54.5574;VDB=0.122437;EFF=START_GAINED(LOW||||411|LOC_Os09g04210|protein_coding|CODING|LOC_Os09g04210.2|1|1),UTR_5_PRIME(MODIFIER||305||411|LOC_Os09g04210|protein_coding|CODING|LOC_Os09g04210.2|1|1),INTRON(MODIFIER||||411|LOC_Os09g04210|protein_coding|CODING|LOC_Os09g04210.1|1|1) FN-13.SNP.9:2223683 chr09:002223683 0 W/2223683-2223683 FN-13 Single Base Substitution A-G INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-349.SNP.9:2238758 chr09:002238758 0 W/2238758-2238758 FN-349 Single Base Substitution A-T STOP_GAINED HET LOC_Os09g04240 retrotransposon protein, putative, unclassified, expressed SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN684-S.SNP.9:2241264 chr09:002241264 0 W/2241264-2241264 FN684-S Single Base Substitution G-T INTRON HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN-161.SNP.9:2241288 chr09:002241288 0 W/2241288-2241288 FN-161 Single Base Substitution C-T INTRON HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3990-S.SNP.9:2242382 chr09:002242382 0 W/2242382-2242382 FN3990-S SNP G -> A AC=1;AN=168;BQB=0.983448;DP=3592;DP4=2113,1300,15,5;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0888085;MQB=0.547049;MQSB=4.80306e-27;RPB=0.995892;SGB=9.91396;VDB=0.432065;EFF=INTRON(MODIFIER||||2236|LOC_Os09g04240|protein_coding|CODING|LOC_Os09g04240.1|4|1) FN2568-S.SNP.9:2246392 chr09:002246392 0 W/2246392-2246392 FN2568-S SNP C -> T AC=1;AN=198;BQB=0.967569;DP=4927;DP4=2008,2628,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0077126;MQB=0.242096;MQSB=7.16558e-11;RPB=0.994647;SGB=25.7687;VDB=0.549935;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.9:2249022 chr09:002249022 0 W/2249022-2249022 FN3422-S SNP T -> C AC=1;AN=184;BQB=0.943964;DP=3072;DP4=1372,1622,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0517578;MQB=0.00907984;MQSB=0.632373;RPB=0.621889;SGB=48.7425;VDB=0.427036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.9:2255937 chr09:002255937 0 W/2255937-2255937 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.986668;DP=2668;DP4=1291,1269,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.23543e-07;MQSB=0.931846;RPB=0.889334;SGB=32.5467;VDB=0.696154;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A959|1923|LOC_Os09g04260|protein_coding|CODING|LOC_Os09g04260.1|10|1) FN2408.SNP.9:2260540 chr09:002260540 0 W/2260540-2260540 FN2408 SNP C -> T AC=1;AN=200;BQB=0.971348;DP=4158;DP4=2216,1714,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.32468e-09;MQSB=0.806952;RPB=0.963456;SGB=21.6694;VDB=0.706175;EFF=INTRON(MODIFIER||||1923|LOC_Os09g04260|protein_coding|CODING|LOC_Os09g04260.1|14|1) FN799-S.SNP.9:2264901 chr09:002264901 0 W/2264901-2264901 FN799-S Single Base Substitution G-C INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN2666-S.SNP.9:2270314 chr09:002270314 0 W/2270314-2270314 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.729709;DP=4793;DP4=2340,2173,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.44353e-12;MQSB=0.999935;RPB=0.56415;SGB=86.5007;VDB=0.774253;EFF=INTRON(MODIFIER||||577|LOC_Os09g04270|protein_coding|CODING|LOC_Os09g04270.1|2|1) FN2449.SNP.9:2276980 chr09:002276980 0 W/2276980-2276980 FN2449 SNP A -> G AC=1;AN=200;BQB=0.993885;DP=5019;DP4=2630,2238,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16932e-08;MQSB=0.903544;RPB=0.992705;SGB=36.6644;VDB=0.681619;EFF=INTRON(MODIFIER||||635|LOC_Os09g04280|protein_coding|CODING|LOC_Os09g04280.1|5|1) FN873-S.SNP.9:2279495 chr09:002279495 0 W/2279495-2279495 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2485.SNP.9:2286908 chr09:002286908 0 W/2286908-2286908 FN2485 SNP C -> T AC=1;AN=200;BQB=0.698822;DP=6781;DP4=3713,2715,17,22;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0908421;MQB=0.0124605;MQSB=1.73933e-36;RPB=0.826725;SGB=173.999;VDB=0.108728;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.9:2292374 chr09:002292374 0 W/2292374-2292374 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.567214;DP=2731;DP4=1512,1145,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.67453e-10;MQSB=0.959984;RPB=0.995678;SGB=64.5316;VDB=0.826263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.9:2295024 chr09:002295024 0 W/2295024-2295024 FN2295 SNP A -> T AC=2;AN=192;BQB=0.195268;DP=4714;DP4=2095,2273,21,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.75257e-19;MQSB=0.80167;RPB=0.827963;SGB=40.2061;VDB=0.558477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.9:2295382 chr09:002295382 0 W/2295382-2295382 FN2656-S SNP A -> T AC=1;AN=200;BQB=0.932239;DP=4510;DP4=1864,2395,14,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.04091e-22;MQSB=0.39509;RPB=0.958949;SGB=123.188;VDB=0.253554;EFF=INTRON(MODIFIER||||163|LOC_Os09g04320|protein_coding|CODING|LOC_Os09g04320.1|1|1) FN2656-S.SNP.9:2295385 chr09:002295385 0 W/2295385-2295385 FN2656-S SNP T -> C AC=1;AN=200;BQB=0.510294;DP=4481;DP4=1880,2324,15,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.46006e-23;MQSB=0.181153;RPB=0.987313;SGB=126.794;VDB=0.399674;EFF=INTRON(MODIFIER||||163|LOC_Os09g04320|protein_coding|CODING|LOC_Os09g04320.1|1|1) FN2557-S.SNP.9:2295629 chr09:002295629 0 W/2295629-2295629 FN2557-S SNP A -> G AC=1;AN=198;BQB=0.960156;DP=4039;DP4=2013,1692,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.28581e-08;MQSB=0.999729;RPB=0.530901;SGB=21.559;VDB=0.0618871;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E94G|163|LOC_Os09g04320|protein_coding|CODING|LOC_Os09g04320.1|2|1) FN2353.SNP.9:2306047 chr09:002306047 0 W/2306047-2306047 FN2353 SNP A -> G AC=1;AN=192;BQB=0.891198;DP=5208;DP4=2394,2635,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=26;MQ0F=0.284946;MQB=0.210549;MQSB=0;RPB=0.972375;SGB=62.9035;VDB=0.925437;EFF=INTRON(MODIFIER||||315|LOC_Os09g04339|protein_coding|CODING|LOC_Os09g04339.1|1|1) FN4098-S.SNP.9:2314037 chr09:002314037 0 W/2314037-2314037 FN4098-S SNP G -> A AC=2;AN=182;BQB=0.99866;DP=2811;DP4=1296,1445,11,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.18534e-09;MQSB=0.998236;RPB=0.294991;SGB=71.1765;VDB=0.175685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.9:2320597 chr09:002320597 0 W/2320597-2320597 FN3656-S SNP A -> G AC=2;AN=190;BQB=0.683339;DP=2740;DP4=1578,992,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.12738e-10;MQSB=0.530521;RPB=0.752092;SGB=51.7524;VDB=0.497837;EFF=SPLICE_SITE_DONOR(HIGH||||115|LOC_Os09g04380|protein_coding|CODING|LOC_Os09g04380.1|1|1),INTRON(MODIFIER||||115|LOC_Os09g04380|protein_coding|CODING|LOC_Os09g04380.1|1|1);LOF=(LOC_Os09g04380|LOC_Os09g04380|1|1.00) FN-350.SNP.9:2323845 chr09:002323845 0 W/2323845-2323845 FN-350 Single Base Substitution C-T INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN3978-S.SNP.9:2323845 chr09:002323845 0 W/2323845-2323845 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.921563;DP=2498;DP4=1281,1112,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.84234e-06;MQSB=0.0772025;RPB=0.549505;SGB=41.6096;VDB=0.417695;EFF=INTERGENIC(MODIFIER||||||||||1) FN4154-S.SNP.9:2323845 chr09:002323845 0 W/2323845-2323845 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.783144;DP=2429;DP4=1214,1133,9,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.74053e-08;MQSB=0.0981203;RPB=0.84851;SGB=34.5398;VDB=0.782578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.9:2328259 chr09:002328259 0 W/2328259-2328259 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.00619018;DP=3031;DP4=1595,1390,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000218667;MQSB=0.954081;RPB=0.995937;SGB=-16.6296;VDB=0.980549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E342K|616|LOC_Os09g04400|protein_coding|CODING|LOC_Os09g04400.1|4|1) FN-65.SNP.9:2333739 chr09:002333739 0 W/2333739-2333739 FN-65 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g04410 retrotransposon, putative, centromere-specific, expressed SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3978-S.SNP.9:2342755 chr09:002342755 0 W/2342755-2342755 FN3978-S SNP C -> A AC=1;AN=168;BQB=0.805308;DP=2747;DP4=1316,1323,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.06099e-05;MQSB=0.999505;RPB=0.766016;SGB=43.3113;VDB=0.192965;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.9:2343015 chr09:002343015 0 W/2343015-2343015 FN266-S Single Base Substitution C-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN854-S.SNP.9:2346723 chr09:002346723 0 W/2346723-2346723 FN854-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g04420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3401-S.SNP.9:2346917 chr09:002346917 0 W/2346917-2346917 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.714634;DP=3669;DP4=1585,1905,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40114e-10;MQSB=0.997814;RPB=0.91857;SGB=-15.2358;VDB=0.991617;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R200|975|LOC_Os09g04420|protein_coding|CODING|LOC_Os09g04420.1|5|1) FN4206-S.SNP.9:2347206 chr09:002347206 0 W/2347206-2347206 FN4206-S SNP T -> C AC=1;AN=170;BQB=0.911737;DP=2585;DP4=1309,1186,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.0076e-09;MQSB=0.946055;RPB=0.948155;SGB=38.3207;VDB=0.433274;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K150E|975|LOC_Os09g04420|protein_coding|CODING|LOC_Os09g04420.1|4|1) FN-96.SNP.9:2347576 chr09:002347576 0 W/2347576-2347576 FN-96 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g04420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN-333.SNP.9:2354533 chr09:002354533 0 W/2354533-2354533 FN-333 Single Base Substitution T-C INTERGENIC HET SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN1684-S.SNP.9:2363449 chr09:002363449 0 W/2363449-2363449 FN1684-S SNP G -> T AC=2;AN=188;BQB=0.313467;DP=2433;DP4=1051,1316,24,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.10838e-14;MQSB=0.923497;RPB=0.974329;SGB=-23.2441;VDB=0.661453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.9:2369739 chr09:002369739 0 W/2369739-2369739 FN3427-S SNP C -> T AC=1;AN=184;BQB=0.926124;DP=3064;DP4=1367,1603,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15103e-06;MQSB=0.967509;RPB=0.760114;SGB=39.2697;VDB=0.235019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.9:2375372 chr09:002375372 0 W/2375372-2375372 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.270762;DP=4592;DP4=2067,2269,5,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.205793;MQB=0.445982;MQSB=0.00775864;RPB=0.0662342;SGB=25.849;VDB=0.0596288;EFF=INTRON(MODIFIER||||989|LOC_Os09g04460|protein_coding|CODING|LOC_Os09g04460.1|6|1) FN684-S.SNP.9:2379634 chr09:002379634 0 W/2379634-2379634 FN684-S Single Base Substitution G-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN684-S.SNP.9:2379635 chr09:002379635 0 W/2379635-2379635 FN684-S Single Base Substitution C-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1395-S.SNP.9:2384153 chr09:002384153 0 W/2384153-2384153 FN1395-S Single Base Substitution G-A INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN1395-S.SNP.9:2384154 chr09:002384154 0 W/2384154-2384154 FN1395-S Single Base Substitution G-A INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN1001-S.SNP.9:2393314 chr09:002393314 0 W/2393314-2393314 FN1001-S Single Base Substitution G-A INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3389-S.SNP.9:2399443 chr09:002399443 0 W/2399443-2399443 FN3389-S SNP G -> A AC=2;AN=184;BQB=0.424462;DP=2609;DP4=1175,1335,12,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.07921e-16;MQSB=0.979807;RPB=0.705088;SGB=134.656;VDB=0.895218;EFF=UTR_5_PRIME(MODIFIER||14||88|LOC_Os09g04504|protein_coding|CODING|LOC_Os09g04504.2|1|1) FN2655-S.SNP.9:2405537 chr09:002405537 0 W/2405537-2405537 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.820402;DP=4477;DP4=2412,1824,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.29422e-13;MQSB=0.779968;RPB=0.684266;SGB=100.316;VDB=0.103386;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.9:2407599 chr09:002407599 0 W/2407599-2407599 FN2265-S SNP C -> G AC=1;AN=190;BQB=0.829408;DP=3934;DP4=1704,1993,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.95142e-14;MQSB=0.950523;RPB=0.650393;SGB=112.85;VDB=0.811727;EFF=INTRON(MODIFIER||||897|LOC_Os09g04520|protein_coding|CODING|LOC_Os09g04520.1|1|1) FN1192-S.SNP.9:2410356 chr09:002410356 0 W/2410356-2410356 FN1192-S Single Base Substitution G-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN525-S.SNP.9:2416264 chr09:002416264 0 W/2416264-2416264 FN525-S Single Base Substitution A-G INTRON HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4260-S.SNP.9:2421493 chr09:002421493 0 W/2421493-2421493 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.420624;DP=2740;DP4=1265,1377,10,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.04114e-10;MQSB=0.998827;RPB=0.860538;SGB=101.184;VDB=0.0900516;EFF=INTRON(MODIFIER||||688|LOC_Os09g04540|protein_coding|CODING|LOC_Os09g04540.1|2|1) FN2649-S.SNP.9:2425367 chr09:002425367 0 W/2425367-2425367 FN2649-S SNP C -> T AC=2;AN=200;BQB=0.00470784;DP=3442;DP4=1902,1158,25,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.02478e-17;MQSB=0.925781;RPB=0.26353;SGB=169.394;VDB=0.97386;EFF=INTERGENIC(MODIFIER||||||||||1) FN506-S.SNP.9:2428361 chr09:002428361 0 W/2428361-2428361 FN506-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g04550 retrotransposon protein, putative, unclassified, expressed SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2684-S.SNP.9:2437908 chr09:002437908 0 W/2437908-2437908 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.786051;DP=5311;DP4=2847,2218,14,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00621352;MQB=3.9738e-05;MQSB=0.245064;RPB=0.399898;SGB=47.7211;VDB=0.17428;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D58E|472|LOC_Os09g04570|protein_coding|CODING|LOC_Os09g04570.1|2|1) FN1550-S.SNP.9:2440497 chr09:002440497 0 W/2440497-2440497 FN1550-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g04580 retrotransposon protein, putative, unclassified SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1416-S.SNP.9:2452355 chr09:002452355 0 W/2452355-2452355 FN1416-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN2372.SNP.9:2452362 chr09:002452362 0 W/2452362-2452362 FN2372 SNP C -> T AC=1;AN=192;BQB=0.423717;DP=4775;DP4=2032,2400,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.02034e-10;MQSB=0.0467332;RPB=0.694979;SGB=75.4235;VDB=0.141654;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.9:2472355 chr09:002472355 0 W/2472355-2472355 FN2375 SNP A -> T AC=1;AN=192;BQB=0.984173;DP=3385;DP4=1873,1296,3,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000295421;MQB=3.23446e-05;MQSB=0.721576;RPB=0.524444;SGB=35.5177;VDB=0.445369;EFF=INTRON(MODIFIER||||351|LOC_Os09g04624|protein_coding|CODING|LOC_Os09g04624.1|2|1) FN3555-S.SNP.9:2473277 chr09:002473277 0 W/2473277-2473277 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.936198;DP=4262;DP4=2193,1970,16,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.31162e-16;MQSB=0.862682;RPB=0.999998;SGB=99.7635;VDB=0.947101;EFF=INTRON(MODIFIER||||351|LOC_Os09g04624|protein_coding|CODING|LOC_Os09g04624.1|2|1) FN986-S.SNP.9:2482783 chr09:002482783 0 W/2482783-2482783 FN986-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g04660 retrotransposon protein, putative, unclassified, expressed SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3830-S.SNP.9:2485929 chr09:002485929 0 W/2485929-2485929 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.933214;DP=2845;DP4=1468,1296,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.60602e-07;MQSB=0.940395;RPB=0.973673;SGB=39.9877;VDB=0.921479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I723T|743|LOC_Os09g04660|protein_coding|CODING|LOC_Os09g04660.1|6|1) FN1716-S.SNP.9:2498389 chr09:002498389 0 W/2498389-2498389 FN1716-S SNP A -> T AC=2;AN=188;BQB=0.483218;DP=2803;DP4=1469,1275,22,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.41612e-15;MQSB=0.936009;RPB=0.612494;SGB=-82.2964;VDB=0.0456167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.9:2501255 chr09:002501255 0 W/2501255-2501255 FN2226-S SNP T -> C AC=1;AN=190;BQB=0.875964;DP=4572;DP4=1686,2325,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000218723;MQB=1.135e-06;MQSB=0.850051;RPB=0.630191;SGB=4.11112;VDB=0.810932;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.9:2507736 chr09:002507736 0 W/2507736-2507736 FN577-S Single Base Substitution A-G INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN809-S.SNP.9:2511119 chr09:002511119 0 W/2511119-2511119 FN809-S Single Base Substitution C-T INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN1336-S.SNP.9:2517869 chr09:002517869 0 W/2517869-2517869 FN1336-S Single Base Substitution C-A INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3615-S.SNP.9:2518376 chr09:002518376 0 W/2518376-2518376 FN3615-S SNP G -> A AC=1;AN=190;BQB=0.434083;DP=2655;DP4=1044,1486,5,18;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00301318;MQB=6.86432e-10;MQSB=0.989574;RPB=0.905335;SGB=71.6393;VDB=0.771312;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.9:2520588 chr09:002520588 0 W/2520588-2520588 FN2376 SNP G -> T AC=2;AN=192;BQB=0.996252;DP=4075;DP4=1867,1811,5,9;HOB=0.0206163;ICB=0.494846;MQ=33;MQ0F=0.081227;MQB=0.891218;MQSB=0;RPB=0.987259;SGB=39.78;VDB=0.992565;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.9:2521941 chr09:002521941 0 W/2521941-2521941 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.953588;DP=2583;DP4=1209,1270,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000774293;MQB=1.90521e-05;MQSB=0.00777726;RPB=0.729513;SGB=57.786;VDB=0.101715;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.9:2525604 chr09:002525604 0 W/2525604-2525604 FN-304 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g04740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-274.SNP.9:2526641 chr09:002526641 0 W/2526641-2526641 FN-274 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g04740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3630-S.SNP.9:2528228 chr09:002528228 0 W/2528228-2528228 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.158029;DP=2563;DP4=1196,1296,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0175576;MQB=0.93468;MQSB=0.000155535;RPB=0.121128;SGB=25.439;VDB=0.0934367;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.9:2534348 chr09:002534348 0 W/2534348-2534348 FN_546-3-1 Single Base Substitution C-T Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN1222-S.SNP.9:2535323 chr09:002535323 0 W/2535323-2535323 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1389-S.SNP.9:2542818 chr09:002542818 0 W/2542818-2542818 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2415.SNP.9:2545841 chr09:002545841 0 W/2545841-2545841 FN2415 SNP G -> A AC=2;AN=200;BQB=0.723907;DP=4518;DP4=2272,1975,20,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.24388e-19;MQSB=0.993338;RPB=0.984951;SGB=164.789;VDB=0.792956;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.9:2555281 chr09:002555281 0 W/2555281-2555281 FN537-S Single Base Substitution A-T INTERGENIC HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN3368-S.SNP.9:2560159 chr09:002560159 0 W/2560159-2560159 FN3368-S SNP T -> A AC=1;AN=184;BQB=0.997021;DP=2889;DP4=1358,1442,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.94425e-10;MQSB=0.997446;RPB=0.300092;SGB=62.3078;VDB=0.531412;EFF=INTRON(MODIFIER||||347|LOC_Os09g04800|protein_coding|CODING|LOC_Os09g04800.1|5|1) FN3368-S.SNP.9:2560160 chr09:002560160 0 W/2560160-2560160 FN3368-S SNP T -> A AC=1;AN=184;BQB=0.965475;DP=2881;DP4=1362,1442,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.71037e-09;MQSB=0.994686;RPB=0.271538;SGB=57.786;VDB=0.575664;EFF=INTRON(MODIFIER||||347|LOC_Os09g04800|protein_coding|CODING|LOC_Os09g04800.1|5|1) W481-5-1.SNP.9:2561263 chr09:002561263 0 W/2561263-2561263 W481-5-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1735-S.SNP.9:2562488 chr09:002562488 0 W/2562488-2562488 FN1735-S SNP T -> A AC=1;AN=188;BQB=0.819126;DP=4043;DP4=2093,1905,16,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.26341e-13;MQSB=0.992417;RPB=0.774428;SGB=54.0524;VDB=0.864504;EFF=INTRON(MODIFIER||||661|LOC_Os09g04810|protein_coding|CODING|LOC_Os09g04810.1|4|1),INTRON(MODIFIER||||613|LOC_Os09g04810|protein_coding|CODING|LOC_Os09g04810.2|3|1) FN673-S.SNP.9:2569825 chr09:002569825 0 W/2569825-2569825 FN673-S Single Base Substitution G-A INTRON HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1740-S.SNP.9:2570702 chr09:002570702 0 W/2570702-2570702 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.862175;DP=1774;DP4=922,814,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.70909e-06;MQSB=0.998696;RPB=0.505364;SGB=0.908326;VDB=0.523489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S370F|589|LOC_Os09g04820|protein_coding|CODING|LOC_Os09g04820.1|4|1) FN3425-S.SNP.9:2574853 chr09:002574853 0 W/2574853-2574853 FN3425-S SNP G -> A AC=1;AN=184;BQB=0.0773768;DP=3206;DP4=1644,1484,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.46398e-05;MQSB=0.883012;RPB=0.707826;SGB=71.3514;VDB=0.514804;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D461|1143|LOC_Os09g04830|protein_coding|CODING|LOC_Os09g04830.1|3|1) FN428-S.SNP.9:2575790 chr09:002575790 0 W/2575790-2575790 FN428-S Single Base Substitution G-A INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN830-S.SNP.9:2578554 chr09:002578554 0 W/2578554-2578554 FN830-S Single Base Substitution C-T INTRON HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN3651-S.SNP.9:2579694 chr09:002579694 0 W/2579694-2579694 FN3651-S SNP C -> T AC=1;AN=190;BQB=0.947146;DP=3158;DP4=1547,1489,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02819e-06;MQSB=0.824275;RPB=0.905447;SGB=39.9877;VDB=0.667401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1704-S.SNP.9:2589108 chr09:002589108 0 W/2589108-2589108 FN1704-S SNP G -> C AC=2;AN=188;BQB=0.210684;DP=3500;DP4=1591,1836,17,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.38731e-22;MQSB=0.984455;RPB=0.418725;SGB=89.6585;VDB=0.960679;EFF=INTRON(MODIFIER||||79|LOC_Os09g04870|protein_coding|CODING|LOC_Os09g04870.1|1|1) FN2258-S.SNP.9:2596677 chr09:002596677 0 W/2596677-2596677 FN2258-S SNP T -> G AC=1;AN=190;BQB=0.592316;DP=3922;DP4=1932,1782,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79751e-10;MQSB=0.7999;RPB=0.937219;SGB=85.5263;VDB=0.276692;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.9:2605471 chr09:002605471 0 W/2605471-2605471 FN971-S Single Base Substitution C-T INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1452-S.SNP.9:2615470 chr09:002615470 0 W/2615470-2615470 FN1452-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g04890 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3797-S.SNP.9:2620088 chr09:002620088 0 W/2620088-2620088 FN3797-S SNP T -> C AC=1;AN=190;BQB=0.958721;DP=2793;DP4=1386,1309,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19094e-05;MQSB=0.970716;RPB=0.789974;SGB=18.3316;VDB=0.775687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.9:2620587 chr09:002620587 0 W/2620587-2620587 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.482836;DP=3538;DP4=1816,1682,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.75696e-09;MQSB=0.997259;RPB=0.795507;SGB=5.62151;VDB=0.716612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.9:2623224 chr09:002623224 0 W/2623224-2623224 FN2200-S SNP C -> A AC=1;AN=190;BQB=0.204099;DP=2272;DP4=930,1220,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000440141;MQB=7.25439e-05;MQSB=6.49052e-17;RPB=0.997776;SGB=58.2031;VDB=0.102598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.9:2629915 chr09:002629915 0 W/2629915-2629915 FN1481-S Single Base Substitution C-T INTERGENIC Homo SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3514-S.SNP.9:2629915 chr09:002629915 0 W/2629915-2629915 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.151878;DP=2933;DP4=1106,1364,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000681896;MQB=0.00313702;MQSB=3.01547e-12;RPB=0.963689;SGB=-14.4565;VDB=0.648846;EFF=INTERGENIC(MODIFIER||||||||||1) FN934-S.SNP.9:2629915 chr09:002629915 0 W/2629915-2629915 FN934-S Single Base Substitution C-T INTERGENIC HOMO SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3780-S.SNP.9:2637885 chr09:002637885 0 W/2637885-2637885 FN3780-S SNP G -> A AC=1;AN=190;BQB=0.980739;DP=2552;DP4=1198,1256,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03029e-06;MQSB=0.998617;RPB=0.895706;SGB=8.33661;VDB=0.326267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.9:2647204 chr09:002647204 0 W/2647204-2647204 FN2708-S SNP A -> G AC=2;AN=200;BQB=0.0190328;DP=4387;DP4=2000,2112,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.96527e-18;MQSB=0.904716;RPB=0.0780738;SGB=86.7987;VDB=0.327875;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.9:2647204 chr09:002647204 0 W/2647204-2647204 FN757-S Single Base Substitution A-G INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3453-S.SNP.9:2653363 chr09:002653363 0 W/2653363-2653363 FN3453-S SNP T -> A AC=2;AN=184;BQB=0.742169;DP=3586;DP4=1656,1772,12,30;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0.230898;MQB=0.422725;MQSB=0;RPB=0.921005;SGB=137.88;VDB=0.940709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S398T|1004|LOC_Os09g04940|protein_coding|CODING|LOC_Os09g04940.1|2|1) FN2629-S.SNP.9:2653844 chr09:002653844 0 W/2653844-2653844 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.883797;DP=4406;DP4=2017,2086,9,9;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.224921;MQB=0.552273;MQSB=0;RPB=0.932295;SGB=77.2904;VDB=0.682337;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A527T|1004|LOC_Os09g04940|protein_coding|CODING|LOC_Os09g04940.1|3|1) FN4305-S.SNP.9:2654265 chr09:002654265 0 W/2654265-2654265 FN4305-S SNP C -> A AC=1;AN=170;BQB=0.980639;DP=2528;DP4=1154,1314,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=32;MQ0F=0.0534019;MQB=0.899728;MQSB=0.643562;RPB=0.967768;SGB=38.987;VDB=0.850504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A667D|1004|LOC_Os09g04940|protein_coding|CODING|LOC_Os09g04940.1|3|1) FN2283.SNP.9:2655440 chr09:002655440 0 W/2655440-2655440 FN2283 SNP C -> T AC=1;AN=192;BQB=0.752067;DP=5344;DP4=2932,2064,23,19;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.200037;MQB=0.0316179;MQSB=0;RPB=0.908807;SGB=139.582;VDB=0.57143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.9:2657136 chr09:002657136 0 W/2657136-2657136 FN2668-S SNP C -> A AC=1;AN=200;BQB=0.366228;DP=4800;DP4=2300,2186,13,8;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.193542;MQB=0.743423;MQSB=0.00152304;RPB=0.969608;SGB=65.5058;VDB=0.0549355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1005L|1344|LOC_Os09g04950|protein_coding|CODING|LOC_Os09g04950.1|2|1) FN-198.SNP.9:2662234 chr09:002662234 0 W/2662234-2662234 FN-198 Single Base Substitution C-T INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN4112-S.SNP.9:2663275 chr09:002663275 0 W/2663275-2663275 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.874884;DP=3791;DP4=1731,1969,12,5;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.179636;MQB=0.971027;MQSB=0;RPB=0.363258;SGB=71.1765;VDB=0.985441;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.9:2664826 chr09:002664826 0 W/2664826-2664826 FN808-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g04960 retrotransposon protein, putative, unclassified, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3295-S.SNP.9:2675160 chr09:002675160 0 W/2675160-2675160 FN3295-S SNP C -> A AC=1;AN=184;BQB=0.468281;DP=2826;DP4=1327,1422,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.03023e-05;MQSB=0.615034;RPB=0.837382;SGB=53.2642;VDB=0.860728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D318E|944|LOC_Os09g04970|protein_coding|CODING|LOC_Os09g04970.1|2|1) FN4137-S.SNP.9:2694373 chr09:002694373 0 W/2694373-2694373 FN4137-S SNP G -> A AC=2;AN=170;BQB=0.402912;DP=2546;DP4=1147,1299,18,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.40571e-15;MQSB=0.987238;RPB=0.990952;SGB=61.409;VDB=0.78125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.9:2698012 chr09:002698012 0 W/2698012-2698012 FN1023-S Single Base Substitution T-C INTRON HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1023-S.SNP.9:2698039 chr09:002698039 0 W/2698039-2698039 FN1023-S Single Base Substitution T-C INTRON HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN458-S.SNP.9:2698967 chr09:002698967 0 W/2698967-2698967 FN458-S Single Base Substitution A-G INTRON HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN-152.SNP.9:2704495 chr09:002704495 0 W/2704495-2704495 FN-152 Single Base Substitution T-C INTRON HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN2358.SNP.9:2707710 chr09:002707710 0 W/2707710-2707710 FN2358 SNP G -> T AC=2;AN=192;BQB=0.18832;DP=4488;DP4=2127,2086,19,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.58931e-18;MQSB=0.99065;RPB=0.951291;SGB=75.0722;VDB=0.770241;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.9:2710054 chr09:002710054 0 W/2710054-2710054 FN1236-S Single Base Substitution T-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN-397.SNP.9:2711600 chr09:002711600 0 W/2711600-2711600 FN-397 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g05040 expressed protein SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1234-S.SNP.9:2712917 chr09:002712917 0 W/2712917-2712917 FN1234-S Single Base Substitution T-G INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN2618-S.SNP.9:2715463 chr09:002715463 0 W/2715463-2715463 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.995924;DP=4194;DP4=1936,2043,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.33719e-10;MQSB=0.998883;RPB=0.724606;SGB=37.1297;VDB=0.229504;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.9:2715718 chr09:002715718 0 W/2715718-2715718 FN4049-S SNP A -> G AC=1;AN=168;BQB=0.999676;DP=2709;DP4=1222,1362,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86789e-06;MQSB=0.731436;RPB=0.767725;SGB=31.3172;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.9:2718757 chr09:002718757 0 W/2718757-2718757 FN2609-S SNP G -> C AC=1;AN=198;BQB=0.297622;DP=4229;DP4=1844,2175,25,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.1557e-18;MQSB=0.638725;RPB=0.0549265;SGB=108.456;VDB=0.0509939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.9:2727335 chr09:002727335 0 W/2727335-2727335 FN2174-S SNP C -> A AC=1;AN=168;BQB=0.0859439;DP=3066;DP4=1616,1419,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000232732;MQSB=0.99077;RPB=0.891158;SGB=-0.101747;VDB=0.73002;EFF=INTRON(MODIFIER||||1005|LOC_Os09g05070|protein_coding|CODING|LOC_Os09g05070.1|2|1) FN2484.SNP.9:2727500 chr09:002727500 0 W/2727500-2727500 FN2484 SNP C -> T AC=2;AN=200;BQB=0.987666;DP=4721;DP4=2390,2095,19,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.20864e-23;MQSB=0.826932;RPB=0.806513;SGB=164.789;VDB=0.855534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P96S|1005|LOC_Os09g05070|protein_coding|CODING|LOC_Os09g05070.1|3|1) FN-186.SNP.9:2728737 chr09:002728737 0 W/2728737-2728737 FN-186 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g05070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN542-S.SNP.9:2729076 chr09:002729076 0 W/2729076-2729076 FN542-S Single Base Substitution G-A INTRON HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1118-S.SNP.9:2729982 chr09:002729982 0 W/2729982-2729982 FN1118-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g05070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2495.SNP.9:2737634 chr09:002737634 0 W/2737634-2737634 FN2495 SNP T -> G AC=2;AN=200;BQB=0.325316;DP=4509;DP4=2218,1912,15,16;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0538922;MQB=0.848187;MQSB=0;RPB=0.888646;SGB=-40.8432;VDB=0.671979;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.9:2742586 chr09:002742586 0 W/2742586-2742586 FN-165 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN712-S.SNP.9:2745806 chr09:002745806 0 W/2745806-2745806 FN712-S Single Base Substitution A-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3698-S.SNP.9:2746088 chr09:002746088 0 W/2746088-2746088 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.925195;DP=2767;DP4=1379,1324,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.6198e-07;MQSB=0.916924;RPB=0.661814;SGB=39.9877;VDB=0.125735;EFF=INTRON(MODIFIER||||755|LOC_Os09g05120|protein_coding|CODING|LOC_Os09g05120.1|1|1) FN2140-S.SNP.9:2748151 chr09:002748151 0 W/2748151-2748151 FN2140-S SNP G -> A AC=1;AN=168;BQB=0.651119;DP=2677;DP4=1342,1285,9,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0227867;MQB=0.0010342;MQSB=2.31545e-08;RPB=0.950737;SGB=38.1788;VDB=0.194617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R264H|755|LOC_Os09g05120|protein_coding|CODING|LOC_Os09g05120.1|2|1) FN1023-S.SNP.9:2749621 chr09:002749621 0 W/2749621-2749621 FN1023-S Single Base Substitution T-G INTRON HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2667-S.SNP.9:2749621 chr09:002749621 0 W/2749621-2749621 FN2667-S SNP T -> G AC=2;AN=200;BQB=0.466607;DP=4749;DP4=2258,2227,21,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.61981e-26;MQSB=0.756802;RPB=0.259702;SGB=99.8245;VDB=0.247501;EFF=INTRON(MODIFIER||||755|LOC_Os09g05120|protein_coding|CODING|LOC_Os09g05120.1|3|1) FN3464-S.SNP.9:2751278 chr09:002751278 0 W/2751278-2751278 FN3464-S SNP C -> T AC=1;AN=184;BQB=0.707076;DP=2986;DP4=1271,1477,14,16;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0358339;MQB=0.00372725;MQSB=0.97621;RPB=7.26656e-05;SGB=-353.094;VDB=0.338441;EFF=INTERGENIC(MODIFIER||||||||||1) FN276-S.SNP.9:2752698 chr09:002752698 0 W/2752698-2752698 FN276-S Single Base Substitution T-C INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2487.SNP.9:2753960 chr09:002753960 0 W/2753960-2753960 FN2487 SNP G -> A AC=1;AN=200;BQB=2.68735e-17;DP=4319;DP4=1529,1786,53,22;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.138921;MQB=0.000978532;MQSB=9.21656e-14;RPB=4.26669e-10;SGB=-1620.9;VDB=0.347007;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.9:2774317 chr09:002774317 0 W/2774317-2774317 FN899-S Single Base Substitution G-A INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2184-S.SNP.9:2792324 chr09:002792324 0 W/2792324-2792324 FN2184-S SNP A -> C AC=1;AN=190;BQB=1.82358e-19;DP=12996;DP4=5127,5316,85,58;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.150816;MQB=0.0144839;MQSB=3.55572e-06;RPB=0.00646268;SGB=-8354.81;VDB=0.475759;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.9:2792324 chr09:002792324 0 W/2792324-2792324 FN903-S Single Base Substitution A-C INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN3865-S.SNP.9:2838604 chr09:002838604 0 W/2838604-2838604 FN3865-S SNP C -> A AC=1;AN=158;BQB=0.00511569;DP=5602;DP4=2124,2595,55,53;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.0772938;MQB=1.79064e-06;MQSB=1.05539e-13;RPB=0.807076;SGB=-2380.15;VDB=0.999917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1513-S.SNP.9:2840093 chr09:002840093 0 W/2840093-2840093 FN1513-S Single Base Substitution C-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1573-S.SNP.9:2873773 chr09:002873773 0 W/2873773-2873773 FN1573-S Single Base Substitution C-A INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1103-S.SNP.9:2877462 chr09:002877462 0 W/2877462-2877462 FN1103-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN769-S.SNP.9:2879465 chr09:002879465 0 W/2879465-2879465 FN769-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g06150 retrotransposon protein, putative, unclassified, expressed SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN620-S.SNP.9:2889146 chr09:002889146 0 W/2889146-2889146 FN620-S Single Base Substitution C-T INTERGENIC HOMO SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1634-S.SNP.9:2890704 chr09:002890704 0 W/2890704-2890704 FN1634-S Single Base Substitution T-C INTRON HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3090-S.SNP.9:2891146 chr09:002891146 0 W/2891146-2891146 FN3090-S SNP C -> A AC=1;AN=184;BQB=0.973763;DP=3091;DP4=1546,1445,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.47641e-05;MQSB=0.981261;RPB=0.311217;SGB=30.6558;VDB=0.165403;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A52|177|LOC_Os09g06160|protein_coding|CODING|LOC_Os09g06160.1|3|1) FN4110-S.SNP.9:2893000 chr09:002893000 0 W/2893000-2893000 FN4110-S SNP C -> T AC=2;AN=182;BQB=0.996266;DP=3000;DP4=1452,1429,24,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00133333;MQB=1.62912e-23;MQSB=1;RPB=0.308892;SGB=133.932;VDB=0.860452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G410S|466|LOC_Os09g06170|protein_coding|CODING|LOC_Os09g06170.1|4|1) FN1344-S.SNP.9:2898033 chr09:002898033 0 W/2898033-2898033 FN1344-S Single Base Substitution G-C INTRON HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-306.SNP.9:2901726 chr09:002901726 0 W/2901726-2901726 FN-306 Single Base Substitution C-T INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2723-S.SNP.9:2902222 chr09:002902222 0 W/2902222-2902222 FN2723-S SNP G -> T AC=1;AN=200;BQB=0.895277;DP=4961;DP4=2404,2277,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11932e-09;MQSB=0.907918;RPB=0.72389;SGB=58.8698;VDB=0.773413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.9:2902990 chr09:002902990 0 W/2902990-2902990 FN2334 SNP T -> G AC=1;AN=192;BQB=0.988814;DP=4910;DP4=2158,2469,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.47762e-08;MQSB=0.792677;RPB=0.995842;SGB=49.2105;VDB=0.331212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.9:2910928 chr09:002910928 0 W/2910928-2910928 FN2419 SNP T -> A AC=1;AN=200;BQB=0.605246;DP=4543;DP4=1968,2278,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4965e-14;MQSB=0.849244;RPB=0.454074;SGB=87.1368;VDB=0.53271;EFF=INTRON(MODIFIER||||523|LOC_Os09g06220|protein_coding|CODING|LOC_Os09g06220.1|2|1) FN3681-S.SNP.9:2912435 chr09:002912435 0 W/2912435-2912435 FN3681-S SNP A -> C AC=1;AN=190;BQB=0.925741;DP=2438;DP4=1155,1168,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57278e-06;MQSB=0.99985;RPB=0.591823;SGB=21.8853;VDB=0.393825;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F13V|523|LOC_Os09g06220|protein_coding|CODING|LOC_Os09g06220.1|1|1) FN-139.SNP.9:2913816 chr09:002913816 0 W/2913816-2913816 FN-139 Single Base Substitution G-A INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN947-S.SNP.9:2913816 chr09:002913816 0 W/2913816-2913816 FN947-S Single Base Substitution G-A INTERGENIC HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN685-S.SNP.9:2928248 chr09:002928248 0 W/2928248-2928248 FN685-S Single Base Substitution A-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-273.SNP.9:2930964 chr09:002930964 0 W/2930964-2930964 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3325-S.SNP.9:2941439 chr09:002941439 0 W/2941439-2941439 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.960657;DP=2692;DP4=1331,1281,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46794e-05;MQSB=0.983199;RPB=0.519276;SGB=39.699;VDB=0.752932;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q97*|599|LOC_Os09g06260|protein_coding|CODING|LOC_Os09g06260.1|1|1) FN1646-S.SNP.9:2941905 chr09:002941905 0 W/2941905-2941905 FN1646-S Single Base Substitution C-G INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1402-S.SNP.9:2945844 chr09:002945844 0 W/2945844-2945844 FN1402-S Single Base Substitution G-A INTRON HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1402-S.SNP.9:2945846 chr09:002945846 0 W/2945846-2945846 FN1402-S Single Base Substitution T-A INTRON HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1232-S.SNP.9:2946770 chr09:002946770 0 W/2946770-2946770 FN1232-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os09g06280 retrotransposon, putative, centromere-specific SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2448.SNP.9:2946770 chr09:002946770 0 W/2946770-2946770 FN2448 SNP C -> T AC=2;AN=200;BQB=0.267573;DP=4300;DP4=2124,1892,16,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.73252e-12;MQSB=0.997892;RPB=0.971062;SGB=137.158;VDB=0.500088;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q133*|160|LOC_Os09g06280|protein_coding|CODING|LOC_Os09g06280.1|1|1) FN3941-S.SNP.9:2946770 chr09:002946770 0 W/2946770-2946770 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.554671;DP=3243;DP4=1733,1401,10,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.25565e-08;MQSB=0.974235;RPB=0.928719;SGB=62.1945;VDB=0.442083;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q133*|160|LOC_Os09g06280|protein_coding|CODING|LOC_Os09g06280.1|1|1) FN3843-S.SNP.9:2947562 chr09:002947562 0 W/2947562-2947562 FN3843-S SNP G -> A AC=1;AN=190;BQB=0.538665;DP=3200;DP4=1534,1577,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77676e-13;MQSB=0.566023;RPB=0.933806;SGB=90.0802;VDB=0.392844;EFF=INTRON(MODIFIER||||464|LOC_Os09g06290|protein_coding|CODING|LOC_Os09g06290.1|1|1) FN2255-S.SNP.9:2947997 chr09:002947997 0 W/2947997-2947997 FN2255-S SNP A -> T AC=1;AN=190;BQB=0.0663695;DP=4472;DP4=2026,1880,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.94819e-05;MQSB=0.806442;RPB=0.978518;SGB=5.66499;VDB=0.282545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I308F|464|LOC_Os09g06290|protein_coding|CODING|LOC_Os09g06290.1|2|1) FN3662-S.SNP.9:2949690 chr09:002949690 0 W/2949690-2949690 FN3662-S SNP A -> C AC=1;AN=190;BQB=0.911389;DP=2893;DP4=1394,1392,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00864155;MQB=0.1225;MQSB=0.153283;RPB=0.597994;SGB=30.8803;VDB=0.582705;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R144|404|LOC_Os09g06300|protein_coding|CODING|LOC_Os09g06300.1|1|1) FN-82.SNP.9:2950350 chr09:002950350 0 W/2950350-2950350 FN-82 Single Base Substitution G-A INTRON HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN4038-S.SNP.9:2959026 chr09:002959026 0 W/2959026-2959026 FN4038-S SNP C -> A AC=1;AN=168;BQB=0.997499;DP=2736;DP4=1265,1356,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.08949e-06;MQSB=0.576454;RPB=0.450221;SGB=-2.96336;VDB=0.818303;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.9:2965125 chr09:002965125 0 W/2965125-2965125 FN792-S Single Base Substitution G-A INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN792-S.SNP.9:2965127 chr09:002965127 0 W/2965127-2965127 FN792-S Single Base Substitution G-T INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN1427-S.SNP.9:2966624 chr09:002966624 0 W/2966624-2966624 FN1427-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06320 retrotransposon, putative, centromere-specific SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN440-S.SNP.9:2967118 chr09:002967118 0 W/2967118-2967118 FN440-S Single Base Substitution A-G INTRON HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2676-S.SNP.9:2975697 chr09:002975697 0 W/2975697-2975697 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.817455;DP=4616;DP4=2191,2125,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.74814e-08;MQSB=0.965444;RPB=0.84791;SGB=40.2696;VDB=0.592075;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.9:2978993 chr09:002978993 0 W/2978993-2978993 FN1633-S Single Base Substitution A-C INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN452-S.SNP.9:2980270 chr09:002980270 0 W/2980270-2980270 FN452-S Single Base Substitution A-C INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN-217.SNP.9:2981466 chr09:002981466 0 W/2981466-2981466 FN-217 Single Base Substitution C-T INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1540-S.SNP.9:2990831 chr09:002990831 0 W/2990831-2990831 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN916-S.SNP.9:2992146 chr09:002992146 0 W/2992146-2992146 FN916-S Single Base Substitution T-C INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-147.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN-147 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN-173.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN-173 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN-21.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN-21 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN-61.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN-61 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1047-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN1047-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1325-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN1325-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1427-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN1427-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1505-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN1505-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1532-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN1532-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2381.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN2381 SNP C -> A AC=1;AN=192;BQB=0.917934;DP=4705;DP4=2156,2268,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74918e-11;MQSB=0.641501;RPB=0.424409;SGB=71.8591;VDB=0.472966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN2557-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN2557-S SNP C -> A AC=1;AN=198;BQB=0.348786;DP=3923;DP4=1843,1881,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.91703e-06;MQSB=0.797911;RPB=0.986341;SGB=43.7442;VDB=0.716755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN3286-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN3286-S SNP C -> A AC=1;AN=184;BQB=0.994017;DP=2935;DP4=1220,1640,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.41751e-10;MQSB=0.980796;RPB=0.139446;SGB=53.3568;VDB=0.53565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN3496-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN3496-S SNP C -> A AC=2;AN=188;BQB=0.905267;DP=2817;DP4=1265,1488,8,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.7226e-13;MQSB=0.991592;RPB=0.89018;SGB=94.4119;VDB=0.970228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN3709-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN3709-S SNP C -> A AC=1;AN=190;BQB=0.942244;DP=2857;DP4=1282,1478,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14944e-11;MQSB=0.975799;RPB=0.396611;SGB=53.8699;VDB=0.224526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN3765-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN3765-S SNP C -> A AC=2;AN=190;BQB=0.987703;DP=2888;DP4=1247,1536,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.30773e-21;MQSB=0.957576;RPB=0.121974;SGB=114.286;VDB=0.440912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN3927-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN3927-S SNP C -> A AC=2;AN=158;BQB=0.471434;DP=2503;DP4=1088,1296,17,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.84871e-20;MQSB=0.953095;RPB=0.439024;SGB=194.656;VDB=0.478011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN4150-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN4150-S SNP C -> A AC=2;AN=170;BQB=0.745586;DP=2600;DP4=1150,1368,21,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.8454e-21;MQSB=0.936438;RPB=0.998937;SGB=76.0649;VDB=0.424184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R88I|164|LOC_Os09g06360|protein_coding|CODING|LOC_Os09g06360.1|2|1) FN559-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN559-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN584-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN584-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN771-S.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 FN771-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. W247-2-1.SNP.9:2992485 chr09:002992485 0 W/2992485-2992485 W247-2-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06360 retrotransposon, putative, centromere-specific SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN2492.SNP.9:2994578 chr09:002994578 0 W/2994578-2994578 FN2492 SNP C -> A AC=2;AN=200;BQB=0.940084;DP=4496;DP4=2051,2222,10,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.22094e-16;MQSB=0.669364;RPB=0.929826;SGB=87.1368;VDB=0.981467;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K459N|567|LOC_Os09g06370|protein_coding|CODING|LOC_Os09g06370.1|3|1) FN2093-S.SNP.9:2997757 chr09:002997757 0 W/2997757-2997757 FN2093-S SNP G -> A AC=1;AN=168;BQB=0.587411;DP=3542;DP4=1833,1669,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.60831e-10;MQSB=0.997808;RPB=0.663679;SGB=-38.3665;VDB=0.490069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.9:3016876 chr09:003016876 0 W/3016876-3016876 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.960804;DP=4544;DP4=2065,2285,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15769e-14;MQSB=0.992535;RPB=0.968506;SGB=69.1109;VDB=0.99149;EFF=INTRON(MODIFIER||||367|LOC_Os09g06400|protein_coding|CODING|LOC_Os09g06400.1|3|1) FN2164-S.SNP.9:3017678 chr09:003017678 0 W/3017678-3017678 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.594637;DP=2791;DP4=1429,1321,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000358295;MQB=1.25045e-07;MQSB=0.989749;RPB=0.927422;SGB=22.1847;VDB=0.214596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G162R|367|LOC_Os09g06400|protein_coding|CODING|LOC_Os09g06400.1|3|1) FN2271-S.SNP.9:3017925 chr09:003017925 0 W/3017925-3017925 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.989153;DP=5064;DP4=2545,2231,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197472;MQB=1.33056e-18;MQSB=0.805261;RPB=0.97533;SGB=64.5217;VDB=0.832932;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I79|367|LOC_Os09g06400|protein_coding|CODING|LOC_Os09g06400.1|3|1) FN1175-S.SNP.9:3019723 chr09:003019723 0 W/3019723-3019723 FN1175-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1222-S.SNP.9:3019723 chr09:003019723 0 W/3019723-3019723 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN3549-S.SNP.9:3021637 chr09:003021637 0 W/3021637-3021637 FN3549-S SNP T -> C AC=1;AN=188;BQB=0.91971;DP=3095;DP4=1270,1707,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37167e-05;MQSB=0.998062;RPB=0.890925;SGB=30.8063;VDB=0.540394;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L511|681|LOC_Os09g06410|protein_coding|CODING|LOC_Os09g06410.1|4|1) FN3513-S.SNP.9:3022752 chr09:003022752 0 W/3022752-3022752 FN3513-S SNP C -> T AC=2;AN=188;BQB=0.974607;DP=3343;DP4=1521,1739,8,8;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000598265;MQB=2.25933e-07;MQSB=0.678564;RPB=0.967742;SGB=67.1521;VDB=0.787351;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.9:3025246 chr09:003025246 0 W/3025246-3025246 FN483-S Single Base Substitution A-G INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2428.SNP.9:3027282 chr09:003027282 0 W/3027282-3027282 FN2428 SNP A -> T AC=1;AN=200;BQB=0.605167;DP=4575;DP4=1886,2263,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.92624e-15;MQSB=0.807419;RPB=0.413657;SGB=55.5366;VDB=0.0218111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.9:3027665 chr09:003027665 0 W/3027665-3027665 FN2246-S SNP C -> T AC=1;AN=190;BQB=0.663743;DP=4628;DP4=2135,2160,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89969e-08;MQSB=0.997257;RPB=0.631665;SGB=53.6492;VDB=0.992445;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.9:3027668 chr09:003027668 0 W/3027668-3027668 FN2246-S SNP C -> T AC=1;AN=190;BQB=0.998749;DP=4611;DP4=2109,2174,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58031e-07;MQSB=0.997727;RPB=0.662936;SGB=23.6597;VDB=0.995188;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.9:3031866 chr09:003031866 0 W/3031866-3031866 FN770-S Single Base Substitution G-A INTRON HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3454-S.SNP.9:3032758 chr09:003032758 0 W/3032758-3032758 FN3454-S SNP G -> A AC=1;AN=184;BQB=0.986328;DP=3173;DP4=1307,1771,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.87798e-09;MQSB=0.989164;RPB=0.511012;SGB=62.3078;VDB=0.508575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.9:3033530 chr09:003033530 0 W/3033530-3033530 FN2387 SNP A -> G AC=1;AN=192;BQB=0.928834;DP=4946;DP4=2427,2213,23,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.82103e-19;MQSB=0.928691;RPB=0.913332;SGB=90.4583;VDB=0.633628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.9:3039241 chr09:003039241 0 W/3039241-3039241 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.997433;DP=3785;DP4=1925,1787,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.53189e-09;MQSB=0.903215;RPB=0.695997;SGB=25.7969;VDB=0.141504;EFF=INTRON(MODIFIER||||709|LOC_Os09g06450|protein_coding|CODING|LOC_Os09g06450.1|2|1) FN-306.SNP.9:3040387 chr09:003040387 0 W/3040387-3040387 FN-306 Single Base Substitution G-C INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1335-S.SNP.9:3047388 chr09:003047388 0 W/3047388-3047388 FN1335-S Single Base Substitution T-G INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN_777-2-1.SNP.9:3059244 chr09:003059244 0 W/3059244-3059244 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3829-S.SNP.9:3068062 chr09:003068062 0 W/3068062-3068062 FN3829-S SNP G -> T AC=1;AN=190;BQB=0.861099;DP=3041;DP4=1611,1329,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02038e-06;MQSB=0.992846;RPB=0.942407;SGB=36.1006;VDB=0.0467126;EFF=INTRON(MODIFIER||||178|LOC_Os09g06480|protein_coding|CODING|LOC_Os09g06480.1|2|1) FN-40.SNP.9:3069544 chr09:003069544 0 W/3069544-3069544 FN-40 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN2321.SNP.9:3072793 chr09:003072793 0 W/3072793-3072793 FN2321 SNP C -> T AC=1;AN=192;BQB=0.718641;DP=5182;DP4=2668,2149,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.11214e-14;MQSB=0.919498;RPB=0.39442;SGB=15.1765;VDB=0.147521;EFF=INTERGENIC(MODIFIER||||||||||1) FN866-S.SNP.9:3081175 chr09:003081175 0 W/3081175-3081175 FN866-S Single Base Substitution A-G INTRON HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3892-S.SNP.9:3081579 chr09:003081579 0 W/3081579-3081579 FN3892-S SNP T -> G AC=2;AN=158;BQB=0.262684;DP=2128;DP4=1326,643,14,3;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.35283e-06;MQSB=0.979262;RPB=0.984547;SGB=26.1881;VDB=0.97161;EFF=INTRON(MODIFIER||||689|LOC_Os09g06499|protein_coding|CODING|LOC_Os09g06499.1|9|1),INTRON(MODIFIER||||487|LOC_Os09g06499|protein_coding|CODING|LOC_Os09g06499.2|9|1) FN3892-S.SNP.9:3084431 chr09:003084431 0 W/3084431-3084431 FN3892-S SNP G -> A AC=2;AN=158;BQB=0.563767;DP=2365;DP4=1170,1093,12,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.34025e-11;MQSB=0.998581;RPB=0.810757;SGB=77.8763;VDB=0.294029;EFF=INTRON(MODIFIER||||689|LOC_Os09g06499|protein_coding|CODING|LOC_Os09g06499.1|11|1),INTRON(MODIFIER||||487|LOC_Os09g06499|protein_coding|CODING|LOC_Os09g06499.2|11|1) FN2620-S.SNP.9:3094461 chr09:003094461 0 W/3094461-3094461 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.854476;DP=4170;DP4=2068,1890,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.92051e-17;MQSB=0.894567;RPB=0.488066;SGB=63.0809;VDB=0.813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.9:3094873 chr09:003094873 0 W/3094873-3094873 FN1405-S Single Base Substitution C-T INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2358.SNP.9:3096355 chr09:003096355 0 W/3096355-3096355 FN2358 SNP C -> T AC=2;AN=192;BQB=0.579778;DP=5238;DP4=2307,2620,17,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.99072e-14;MQSB=0.757691;RPB=0.7663;SGB=32.3844;VDB=0.707476;EFF=INTERGENIC(MODIFIER||||||||||1) FN1438-S.SNP.9:3096957 chr09:003096957 0 W/3096957-3096957 FN1438-S Single Base Substitution C-T STOP_GAINED HET LOC_Os09g06520 expressed protein SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN772-S.SNP.9:3098162 chr09:003098162 0 W/3098162-3098162 FN772-S Single Base Substitution C-T INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN559-S.SNP.9:3099346 chr09:003099346 0 W/3099346-3099346 FN559-S Single Base Substitution T-A INTRON HET SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN3472-S.SNP.9:3100253 chr09:003100253 0 W/3100253-3100253 FN3472-S SNP C -> A AC=1;AN=184;BQB=0.889748;DP=2459;DP4=1207,1137,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.54183e-09;MQSB=0.998637;RPB=0.948709;SGB=66.8296;VDB=0.68041;EFF=INTRON(MODIFIER||||473|LOC_Os09g06520|protein_coding|CODING|LOC_Os09g06520.1|7|1) FN724-S.SNP.9:3108831 chr09:003108831 0 W/3108831-3108831 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2457.SNP.9:3118968 chr09:003118968 0 W/3118968-3118968 FN2457 SNP C -> A AC=1;AN=200;BQB=0.125896;DP=4220;DP4=2025,1974,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000238871;MQSB=0.967583;RPB=0.631576;SGB=49.6594;VDB=0.316685;EFF=UTR_5_PRIME(MODIFIER||543||1125|LOC_Os09g06560|protein_coding|CODING|LOC_Os09g06560.1|1|1) FN1537-S.SNP.9:3128637 chr09:003128637 0 W/3128637-3128637 FN1537-S Single Base Substitution C-G INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN-181.SNP.9:3132341 chr09:003132341 0 W/3132341-3132341 FN-181 Single Base Substitution G-T STOP_GAINED HET LOC_Os09g06590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2556-S.SNP.9:3138373 chr09:003138373 0 W/3138373-3138373 FN2556-S SNP G -> T AC=1;AN=198;BQB=0.488511;DP=4587;DP4=2262,1984,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.03607e-13;MQSB=0.963031;RPB=0.316441;SGB=90.4807;VDB=0.84165;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.9:3142643 chr09:003142643 0 W/3142643-3142643 FN1711-S SNP A -> T AC=2;AN=188;BQB=0.0239118;DP=3314;DP4=2053,1209,21,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.31852e-16;MQSB=0.998658;RPB=0.124788;SGB=33.3175;VDB=0.961541;EFF=START_GAINED(LOW||||358|LOC_Os09g06634|protein_coding|CODING|LOC_Os09g06634.1|1|1),UTR_5_PRIME(MODIFIER||2862||358|LOC_Os09g06634|protein_coding|CODING|LOC_Os09g06634.1|1|1) FN944-S.SNP.9:3146406 chr09:003146406 0 W/3146406-3146406 FN944-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g06634 transposon protein, putative, Pong sub-class, expressed SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN443-S.SNP.9:3160507 chr09:003160507 0 W/3160507-3160507 FN443-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2386.SNP.9:3160536 chr09:003160536 0 W/3160536-3160536 FN2386 SNP T -> C AC=1;AN=192;BQB=0.692431;DP=4767;DP4=2160,2201,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.14379e-14;MQSB=0.875201;RPB=0.963183;SGB=-8.56084;VDB=0.763643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F126S|521|LOC_Os09g06650|protein_coding|CODING|LOC_Os09g06650.1|3|1) FN2784-S.SNP.9:3161287 chr09:003161287 0 W/3161287-3161287 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.45106;DP=4473;DP4=2202,1995,17,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000223564;MQB=1.97409e-21;MQSB=0.927737;RPB=0.945297;SGB=42.8469;VDB=0.596807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D363N|521|LOC_Os09g06650|protein_coding|CODING|LOC_Os09g06650.1|4|1) FN1058-S.SNP.9:3162117 chr09:003162117 0 W/3162117-3162117 FN1058-S Single Base Substitution G-A INTRON HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2667-S.SNP.9:3164651 chr09:003164651 0 W/3164651-3164651 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.356253;DP=4540;DP4=2038,2323,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19365e-11;MQSB=0.940675;RPB=0.999231;SGB=77.2904;VDB=0.31958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K307N|394|LOC_Os09g06660|protein_coding|CODING|LOC_Os09g06660.1|2|1) FN1224-S.SNP.9:3171710 chr09:003171710 0 W/3171710-3171710 FN1224-S Single Base Substitution A-C INTRON HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1229-S.SNP.9:3172181 chr09:003172181 0 W/3172181-3172181 FN1229-S Single Base Substitution A-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1396-S.SNP.9:3175326 chr09:003175326 0 W/3175326-3175326 FN1396-S Single Base Substitution T-C INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN-61.SNP.9:3176460 chr09:003176460 0 W/3176460-3176460 FN-61 Single Base Substitution G-T INTERGENIC HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1284-S.SNP.9:3180639 chr09:003180639 0 W/3180639-3180639 FN1284-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g06690 expressed protein SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN889-S.SNP.9:3186030 chr09:003186030 0 W/3186030-3186030 FN889-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2767-S.SNP.9:3186220 chr09:003186220 0 W/3186220-3186220 FN2767-S SNP G -> T AC=1;AN=198;BQB=0.991794;DP=3237;DP4=1543,1440,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.49723e-06;MQSB=0.0935228;RPB=0.974525;SGB=54.144;VDB=0.579086;EFF=INTRON(MODIFIER||||297|LOC_Os09g06700|protein_coding|CODING|LOC_Os09g06700.1|3|1) FN536-S.SNP.9:3188192 chr09:003188192 0 W/3188192-3188192 FN536-S Single Base Substitution A-G INTERGENIC HOMO SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN471-S.SNP.9:3191245 chr09:003191245 0 W/3191245-3191245 FN471-S Single Base Substitution C-T INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN-243.SNP.9:3192818 chr09:003192818 0 W/3192818-3192818 FN-243 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN1509-S.SNP.9:3194949 chr09:003194949 0 W/3194949-3194949 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3676-S.SNP.9:3195376 chr09:003195376 0 W/3195376-3195376 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.857831;DP=2540;DP4=1339,1116,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.52032e-07;MQSB=0.924948;RPB=0.893462;SGB=58.2031;VDB=0.816233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.9:3195638 chr09:003195638 0 W/3195638-3195638 FN3510-S SNP A -> T AC=1;AN=188;BQB=0.432717;DP=2751;DP4=1247,1373,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.55063e-07;MQSB=0.985734;RPB=0.956048;SGB=26.0762;VDB=0.727325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.9:3197089 chr09:003197089 0 W/3197089-3197089 FN3591-S SNP G -> A AC=1;AN=188;BQB=0.996384;DP=2803;DP4=1187,1558,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.458e-11;MQSB=0.831729;RPB=0.337924;SGB=71.6954;VDB=0.916106;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S13F|107|LOC_Os09g06719|protein_coding|CODING|LOC_Os09g06719.1|1|1) FN3679-S.SNP.9:3197569 chr09:003197569 0 W/3197569-3197569 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.994714;DP=3119;DP4=1951,1048,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89119e-11;MQSB=0.768347;RPB=0.998786;SGB=85.5263;VDB=0.449248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.9:3198192 chr09:003198192 0 W/3198192-3198192 FN3550-S SNP G -> A AC=2;AN=188;BQB=0.990359;DP=2909;DP4=1601,1239,12,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.24433e-11;MQSB=0.830629;RPB=0.997712;SGB=71.6954;VDB=0.313295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.9:3198193 chr09:003198193 0 W/3198193-3198193 FN3550-S SNP A -> T AC=2;AN=188;BQB=0.994225;DP=2901;DP4=1526,1222,14,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.30145e-12;MQSB=0.88703;RPB=0.938546;SGB=33.7061;VDB=0.241122;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.9:3199807 chr09:003199807 0 W/3199807-3199807 FN427-S Single Base Substitution C-T INTRON HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN-22.SNP.9:3200050 chr09:003200050 0 W/3200050-3200050 FN-22 Single Base Substitution C-G INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2097-S.SNP.9:3205042 chr09:003205042 0 W/3205042-3205042 FN2097-S SNP G -> A AC=2;AN=168;BQB=0.356376;DP=3754;DP4=1685,1980,24,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.63519e-25;MQSB=0.993368;RPB=0.128948;SGB=-118.282;VDB=0.749904;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.9:3209899 chr09:003209899 0 W/3209899-3209899 FN1481-S Single Base Substitution T-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN-394.SNP.9:3220093 chr09:003220093 0 W/3220093-3220093 FN-394 Single Base Substitution G-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2412.SNP.9:3222801 chr09:003222801 0 W/3222801-3222801 FN2412 SNP A -> G AC=1;AN=200;BQB=0.623639;DP=4176;DP4=2072,1724,7,13;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0153257;MQB=0.00296005;MQSB=0.97685;RPB=0.999412;SGB=61.9006;VDB=0.0773092;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.9:3222982 chr09:003222982 0 W/3222982-3222982 FN4089-S SNP G -> C AC=1;AN=182;BQB=0.977246;DP=2631;DP4=1331,1229,4,10;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0558723;MQB=3.48541e-05;MQSB=3.04796e-18;RPB=0.721966;SGB=57.644;VDB=0.833459;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.9:3222991 chr09:003222991 0 W/3222991-3222991 FN4089-S SNP G -> A AC=1;AN=182;BQB=0.996498;DP=2610;DP4=1295,1223,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.0478927;MQB=7.1813e-06;MQSB=2.9183e-16;RPB=0.295234;SGB=39.1386;VDB=0.823381;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.9:3223636 chr09:003223636 0 W/3223636-3223636 FN976-S Single Base Substitution A-G INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN-328.SNP.9:3224408 chr09:003224408 0 W/3224408-3224408 FN-328 Single Base Substitution C-T INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1577-S.SNP.9:3224498 chr09:003224498 0 W/3224498-3224498 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2233-S.SNP.9:3225277 chr09:003225277 0 W/3225277-3225277 FN2233-S SNP G -> A AC=1;AN=190;BQB=0.550326;DP=2739;DP4=1086,1437,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0273823;MQB=0.480213;MQSB=4.21413e-18;RPB=0.657609;SGB=36.1006;VDB=0.856224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.9:3225923 chr09:003225923 0 W/3225923-3225923 FN2385 SNP A -> G AC=2;AN=192;BQB=0.981555;DP=4509;DP4=2045,2164,22,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.75959e-23;MQSB=0.00143273;RPB=0.700136;SGB=153.839;VDB=0.911253;EFF=INTRON(MODIFIER||||203|LOC_Os09g06760|protein_coding|CODING|LOC_Os09g06760.1|1|1) FN2349.SNP.9:3228338 chr09:003228338 0 W/3228338-3228338 FN2349 SNP T -> A AC=1;AN=192;BQB=0.630581;DP=4124;DP4=2085,1556,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.85139e-08;MQSB=0.647144;RPB=0.981041;SGB=7.3548;VDB=0.820663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1179-S.SNP.9:3228658 chr09:003228658 0 W/3228658-3228658 FN1179-S Single Base Substitution G-A INTERGENIC HET SNo: 1019, Mutant_ID: FN1179-S, Generation: M2, Mutations: 63, Genes: 87, Seed availability: Yes. FN1458-S.SNP.9:3237368 chr09:003237368 0 W/3237368-3237368 FN1458-S Single Base Substitution T-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-329.SNP.9:3237776 chr09:003237776 0 W/3237776-3237776 FN-329 Single Base Substitution A-G INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-329.SNP.9:3237777 chr09:003237777 0 W/3237777-3237777 FN-329 Single Base Substitution A-T INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2488.SNP.9:3240767 chr09:003240767 0 W/3240767-3240767 FN2488 SNP C -> G AC=1;AN=200;BQB=0.733202;DP=4171;DP4=1872,1929,9,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0201391;MQB=0.0106989;MQSB=0.0022668;RPB=0.534994;SGB=68.0801;VDB=0.857478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Cca|A582P|704|LOC_Os09g06780|protein_coding|CODING|LOC_Os09g06780.1|2|1) FN3466-S.SNP.9:3240810 chr09:003240810 0 W/3240810-3240810 FN3466-S SNP C -> G AC=1;AN=184;BQB=0.841251;DP=2680;DP4=1146,1466,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0320896;MQB=0.270973;MQSB=0.00102782;RPB=0.115159;SGB=98.4821;VDB=0.276706;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccC|P567|704|LOC_Os09g06780|protein_coding|CODING|LOC_Os09g06780.1|2|1) FN1667-S.SNP.9:3243758 chr09:003243758 0 W/3243758-3243758 FN1667-S SNP C -> T AC=2;AN=188;BQB=0.265835;DP=850;DP4=541,274,9,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=0.00532411;MQSB=0.968146;RPB=0.928394;SGB=13.3597;VDB=0.556941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.9:3244742 chr09:003244742 0 W/3244742-3244742 FN3462-S SNP G -> C AC=1;AN=184;BQB=0.923279;DP=2803;DP4=1485,1225,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0360328;MQB=0.0422504;MQSB=0.766586;RPB=0.21411;SGB=28.7043;VDB=0.260266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.9:3248980 chr09:003248980 0 W/3248980-3248980 FN1282-S Single Base Substitution G-C INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1285-S.SNP.9:3252028 chr09:003252028 0 W/3252028-3252028 FN1285-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g06800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN3293-S.SNP.9:3261468 chr09:003261468 0 W/3261468-3261468 FN3293-S SNP T -> G AC=1;AN=184;BQB=0.831653;DP=3156;DP4=1334,1663,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00728771;MQB=1.68968e-06;MQSB=0.917249;RPB=0.785219;SGB=60.4004;VDB=0.800863;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A677|824|LOC_Os09g06820|protein_coding|CODING|LOC_Os09g06820.1|2|1) FN4201-S.SNP.9:3263211 chr09:003263211 0 W/3263211-3263211 FN4201-S SNP A -> G AC=2;AN=170;BQB=0.766402;DP=2458;DP4=1161,1211,4,17;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0117982;MQB=0.128907;MQSB=3.7014e-05;RPB=0.867541;SGB=87.856;VDB=0.0983663;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C239R|824|LOC_Os09g06820|protein_coding|CODING|LOC_Os09g06820.1|1|1) FN3330-S.SNP.9:3263406 chr09:003263406 0 W/3263406-3263406 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.820409;DP=3106;DP4=1492,1489,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00128783;MQB=6.03309e-11;MQSB=0.424563;RPB=0.839879;SGB=84.9167;VDB=0.861911;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R174*|824|LOC_Os09g06820|protein_coding|CODING|LOC_Os09g06820.1|1|1);LOF=(LOC_Os09g06820|LOC_Os09g06820|1|1.00);NMD=(LOC_Os09g06820|LOC_Os09g06820|1|1.00) FN3530-S.SNP.9:3264197 chr09:003264197 0 W/3264197-3264197 FN3530-S SNP T -> G AC=2;AN=188;BQB=0.999715;DP=2432;DP4=1174,1169,19,11;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0271382;MQB=1.0941e-09;MQSB=1.05581e-11;RPB=0.894826;SGB=130.758;VDB=0.845298;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.9:3265524 chr09:003265524 0 W/3265524-3265524 FN722-S Single Base Substitution A-G INTERGENIC HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2351.SNP.9:3280232 chr09:003280232 0 W/3280232-3280232 FN2351 SNP G -> A AC=1;AN=192;BQB=0.992238;DP=4800;DP4=2021,2397,11,21;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00104167;MQB=1.51234e-13;MQSB=0.0291814;RPB=0.767504;SGB=-5.7391;VDB=0.865068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.9:3280233 chr09:003280233 0 W/3280233-3280233 FN2351 SNP A -> T AC=1;AN=192;BQB=0.833132;DP=4806;DP4=1985,2507,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00124844;MQB=7.90539e-14;MQSB=0.166912;RPB=0.908317;SGB=96.8096;VDB=0.726208;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.9:3280991 chr09:003280991 0 W/3280991-3280991 FN632-S Single Base Substitution T-C INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. W470-2-1.SNP.9:3281137 chr09:003281137 0 W/3281137-3281137 W470-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2721-S.SNP.9:3283698 chr09:003283698 0 W/3283698-3283698 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.927964;DP=4951;DP4=2610,2108,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.47062e-12;MQSB=0.999011;RPB=0.571639;SGB=86.5007;VDB=0.332701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.9:3296347 chr09:003296347 0 W/3296347-3296347 FN1492-S Single Base Substitution G-A INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN3436-S.SNP.9:3297127 chr09:003297127 0 W/3297127-3297127 FN3436-S SNP C -> T AC=1;AN=184;BQB=0.904379;DP=3016;DP4=1398,1545,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35259e-10;MQSB=0.994204;RPB=0.922979;SGB=66.8296;VDB=0.825798;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.9:3297522 chr09:003297522 0 W/3297522-3297522 FN_815-4-1 Single Base Substitution T-C Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN2257-S.SNP.9:3298368 chr09:003298368 0 W/3298368-3298368 FN2257-S SNP T -> C AC=2;AN=190;BQB=0.805854;DP=4529;DP4=1830,2117,21,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000220799;MQB=1.46173e-22;MQSB=0.103013;RPB=0.823439;SGB=208.481;VDB=0.126013;EFF=INTRON(MODIFIER||||91|LOC_Os09g06880|protein_coding|CODING|LOC_Os09g06880.1|2|1) FN2080-S.SNP.9:3300834 chr09:003300834 0 W/3300834-3300834 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.00159074;DP=2129;DP4=773,1294,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.29947e-06;MQSB=0.92127;RPB=0.962304;SGB=-85.2162;VDB=0.940856;EFF=INTRON(MODIFIER||||91|LOC_Os09g06880|protein_coding|CODING|LOC_Os09g06880.1|1|1) FN3309-S.SNP.9:3304410 chr09:003304410 0 W/3304410-3304410 FN3309-S SNP C -> A AC=1;AN=184;BQB=0.595166;DP=3005;DP4=1439,1468,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.40944e-07;MQSB=0.997828;RPB=0.311277;SGB=39.2697;VDB=0.298272;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V16|333|LOC_Os09g06890|protein_coding|CODING|LOC_Os09g06890.1|2|1) FN3979-S.SNP.9:3307228 chr09:003307228 0 W/3307228-3307228 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.91585;DP=3380;DP4=1405,1830,15,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.69806e-16;MQSB=0.993949;RPB=0.136172;SGB=145.22;VDB=0.391299;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T236|333|LOC_Os09g06890|protein_coding|CODING|LOC_Os09g06890.1|6|1) FN-238.SNP.9:3312913 chr09:003312913 0 W/3312913-3312913 FN-238 Single Base Substitution C-A INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1284-S.SNP.9:3313989 chr09:003313989 0 W/3313989-3313989 FN1284-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2215-S.SNP.9:3314631 chr09:003314631 0 W/3314631-3314631 FN2215-S SNP C -> G AC=2;AN=190;BQB=0.966276;DP=3978;DP4=1683,1984,15,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68625e-22;MQSB=0.983469;RPB=0.957753;SGB=185.712;VDB=0.18228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.9:3316852 chr09:003316852 0 W/3316852-3316852 FN1366-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3366-S.SNP.9:3318352 chr09:003318352 0 W/3318352-3318352 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.728169;DP=3232;DP4=1644,1275,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35617e-07;MQSB=0.972476;RPB=0.375515;SGB=40.9276;VDB=0.215859;EFF=INTRON(MODIFIER||||183|LOC_Os09g06900|protein_coding|CODING|LOC_Os09g06900.1|1|1) FN624-S.SNP.9:3318580 chr09:003318580 0 W/3318580-3318580 FN624-S Single Base Substitution G-T INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN681-S.SNP.9:3319285 chr09:003319285 0 W/3319285-3319285 FN681-S Single Base Substitution G-A INTRON HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. W706-3-1.SNP.9:3326572 chr09:003326572 0 W/3326572-3326572 W706-3-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g06910 retrotransposon protein, putative, unclassified, expressed SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3382-S.SNP.9:3339553 chr09:003339553 0 W/3339553-3339553 FN3382-S SNP G -> A AC=2;AN=184;BQB=0.971214;DP=3594;DP4=2109,1318,20,15;HOB=0.0215028;ICB=0.494625;MQ=17;MQ0F=0.470506;MQB=0.0433972;MQSB=2.17206e-09;RPB=0.203806;SGB=152.744;VDB=0.90455;EFF=INTRON(MODIFIER||||1340|LOC_Os09g06920|protein_coding|CODING|LOC_Os09g06920.1|3|1) FN472-S.SNP.9:3345900 chr09:003345900 0 W/3345900-3345900 FN472-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2103-S.SNP.9:3348954 chr09:003348954 0 W/3348954-3348954 FN2103-S SNP C -> T AC=2;AN=168;BQB=0.966878;DP=3159;DP4=2251,857,30,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.55852e-18;MQSB=0.972953;RPB=0.793711;SGB=113.657;VDB=0.545964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.9:3350229 chr09:003350229 0 W/3350229-3350229 FN4221-S SNP C -> T AC=1;AN=170;BQB=0.991009;DP=1434;DP4=655,739,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.0027894;MQB=0.000103327;MQSB=0.787211;RPB=0.996799;SGB=25.6601;VDB=0.781662;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.9:3351554 chr09:003351554 0 W/3351554-3351554 FN3357-S SNP G -> A AC=1;AN=184;BQB=0.866854;DP=3360;DP4=1424,1757,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.3726e-06;MQSB=0.252308;RPB=0.514;SGB=25.1826;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.9:3356259 chr09:003356259 0 W/3356259-3356259 FN3518-S SNP C -> T AC=2;AN=188;BQB=0.954753;DP=2966;DP4=1338,1541,10,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91968e-16;MQSB=0.998761;RPB=0.998635;SGB=121.672;VDB=0.459449;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P114|146|LOC_Os09g06950|protein_coding|CODING|LOC_Os09g06950.1|1|1) FN486-S.SNP.9:3357329 chr09:003357329 0 W/3357329-3357329 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2191-S.SNP.9:3359389 chr09:003359389 0 W/3359389-3359389 FN2191-S SNP G -> A AC=1;AN=190;BQB=0.348571;DP=4634;DP4=2012,2382,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.39069e-08;MQSB=0.0699314;RPB=0.920221;SGB=50.3161;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.9:3360292 chr09:003360292 0 W/3360292-3360292 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.96949;DP=4857;DP4=2116,2289,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000205888;MQB=2.57189e-17;MQSB=0.977275;RPB=0.428783;SGB=25.8654;VDB=0.416684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.9:3360293 chr09:003360293 0 W/3360293-3360293 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.710906;DP=4843;DP4=2127,2401,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206484;MQB=5.10642e-16;MQSB=0.999683;RPB=0.600918;SGB=78.7471;VDB=0.429633;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.9:3364302 chr09:003364302 0 W/3364302-3364302 FN_N1-116-1 Single Base Substitution T-C HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2620-S.SNP.9:3366667 chr09:003366667 0 W/3366667-3366667 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.462182;DP=3943;DP4=1903,1832,16,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14235e-16;MQSB=0.897863;RPB=0.878748;SGB=112.051;VDB=0.344426;EFF=INTERGENIC(MODIFIER||||||||||1) W416-6-1.SNP.9:3372229 chr09:003372229 0 W/3372229-3372229 W416-6-1 Single Base Substitution T-A INTRON HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. W450-6-1.SNP.9:3373398 chr09:003373398 0 W/3373398-3373398 W450-6-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g06970 transport protein particle component, Bet3, domain containing protein, expressed SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1541-S.SNP.9:3376232 chr09:003376232 0 W/3376232-3376232 FN1541-S Single Base Substitution C-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN1068-S.SNP.9:3377702 chr09:003377702 0 W/3377702-3377702 FN1068-S Single Base Substitution A-T INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1427-S.SNP.9:3381797 chr09:003381797 0 W/3381797-3381797 FN1427-S Single Base Substitution T-A INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1615-S.SNP.9:3383656 chr09:003383656 0 W/3383656-3383656 FN1615-S Single Base Substitution G-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN-210.SNP.9:3388153 chr09:003388153 0 W/3388153-3388153 FN-210 Single Base Substitution C-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN2221-S.SNP.9:3391239 chr09:003391239 0 W/3391239-3391239 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.117851;DP=2930;DP4=1385,1207,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000341297;MQB=1.5467e-05;MQSB=6.35066e-06;RPB=0.858076;SGB=39.6545;VDB=0.863595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R198Q|790|LOC_Os09g07000|protein_coding|CODING|LOC_Os09g07000.1|2|1) FN441-S.SNP.9:3392067 chr09:003392067 0 W/3392067-3392067 FN441-S Single Base Substitution T-C INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2335.SNP.9:3392711 chr09:003392711 0 W/3392711-3392711 FN2335 SNP G -> A AC=1;AN=192;BQB=0.40923;DP=4980;DP4=2230,2484,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.18808e-09;MQSB=0.484769;RPB=0.924548;SGB=67.4678;VDB=0.929519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E380K|790|LOC_Os09g07000|protein_coding|CODING|LOC_Os09g07000.1|4|1) FN-198.SNP.9:3394099 chr09:003394099 0 W/3394099-3394099 FN-198 Single Base Substitution C-T INTRON HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN480-S.SNP.9:3394321 chr09:003394321 0 W/3394321-3394321 FN480-S Single Base Substitution T-C INTRON HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN554-S.SNP.9:3394591 chr09:003394591 0 W/3394591-3394591 FN554-S Single Base Substitution T-C INTRON HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN3489-S.SNP.9:3403383 chr09:003403383 0 W/3403383-3403383 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.95711;DP=2796;DP4=1385,1357,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30385e-05;MQSB=0.990699;RPB=0.141848;SGB=30.6558;VDB=0.0966918;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.9:3405003 chr09:003405003 0 W/3405003-3405003 FN_786-4-1 Single Base Substitution G-T HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN4234-S.SNP.9:3417586 chr09:003417586 0 W/3417586-3417586 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.896905;DP=2595;DP4=1254,1272,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.5971e-08;MQSB=0.994251;RPB=0.065587;SGB=70.0854;VDB=0.0286515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.9:3418634 chr09:003418634 0 W/3418634-3418634 FN2102-S SNP A -> C AC=1;AN=168;BQB=0.141765;DP=3467;DP4=1519,1909,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00432651;MQB=0.000503512;MQSB=0.240828;RPB=0.00506567;SGB=-14.0801;VDB=0.0335349;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.9:3420464 chr09:003420464 0 W/3420464-3420464 FN3368-S SNP G -> A AC=2;AN=184;BQB=0.948337;DP=2995;DP4=1435,1407,15,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.40127e-19;MQSB=0.816116;RPB=0.133682;SGB=170.831;VDB=0.145047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A93T|675|LOC_Os09g07060|protein_coding|CODING|LOC_Os09g07060.1|2|1) FN-412.SNP.9:3426585 chr09:003426585 0 W/3426585-3426585 FN-412 Single Base Substitution G-T INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN859-S.SNP.9:3426896 chr09:003426896 0 W/3426896-3426896 FN859-S Single Base Substitution T-A INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1258-S.SNP.9:3427107 chr09:003427107 0 W/3427107-3427107 FN1258-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g07070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN1258-S.SNP.9:3427108 chr09:003427108 0 W/3427108-3427108 FN1258-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3761-S.SNP.9:3430039 chr09:003430039 0 W/3430039-3430039 FN3761-S SNP C -> G AC=1;AN=190;BQB=0.969673;DP=2612;DP4=1317,1215,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.24453e-08;MQSB=0.994037;RPB=0.996947;SGB=49.0954;VDB=0.142341;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Gct|P783A|1395|LOC_Os09g07070|protein_coding|CODING|LOC_Os09g07070.1|6|1) FN4258-S.SNP.9:3430915 chr09:003430915 0 W/3430915-3430915 FN4258-S SNP C -> T AC=1;AN=170;BQB=0.736715;DP=2474;DP4=1274,1128,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.81144e-09;MQSB=0.941446;RPB=0.767781;SGB=56.7575;VDB=0.508984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1075S|1395|LOC_Os09g07070|protein_coding|CODING|LOC_Os09g07070.1|6|1) FN1720-S.SNP.9:3432699 chr09:003432699 0 W/3432699-3432699 FN1720-S SNP C -> T AC=1;AN=188;BQB=0.682989;DP=2599;DP4=1237,1330,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000208758;MQSB=0.987782;RPB=0.543386;SGB=-16.6296;VDB=0.425465;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.9:3432915 chr09:003432915 0 W/3432915-3432915 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.973374;DP=3021;DP4=1498,1416,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.94749e-10;MQSB=0.878388;RPB=0.995085;SGB=46.3132;VDB=0.842705;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.9:3444509 chr09:003444509 0 W/3444509-3444509 FN501-S Single Base Substitution C-T INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1633-S.SNP.9:3451098 chr09:003451098 0 W/3451098-3451098 FN1633-S Single Base Substitution A-G INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3455-S.SNP.9:3451651 chr09:003451651 0 W/3451651-3451651 FN3455-S SNP G -> A AC=2;AN=184;BQB=0.801756;DP=2423;DP4=1240,1081,18,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.11787e-13;MQSB=0.939601;RPB=0.742401;SGB=121.091;VDB=0.855066;EFF=INTRON(MODIFIER||||319|LOC_Os09g07110|protein_coding|CODING|LOC_Os09g07110.1|2|1) FN1617-S.SNP.9:3455563 chr09:003455563 0 W/3455563-3455563 FN1617-S Single Base Substitution T-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3527-S.SNP.9:3455568 chr09:003455568 0 W/3455568-3455568 FN3527-S SNP A -> C AC=1;AN=188;BQB=0.946946;DP=3033;DP4=1439,1532,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37807e-10;MQSB=0.7824;RPB=0.348706;SGB=26.0762;VDB=0.324463;EFF=INTERGENIC(MODIFIER||||||||||1) FN-100.SNP.9:3462914 chr09:003462914 0 W/3462914-3462914 FN-100 Single Base Substitution G-A INTRON HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN2711-S.SNP.9:3477863 chr09:003477863 0 W/3477863-3477863 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.72161;DP=5034;DP4=2313,2427,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.77675e-11;MQSB=0.590041;RPB=0.711884;SGB=14.3054;VDB=0.220917;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.9:3487370 chr09:003487370 0 W/3487370-3487370 FN970-S Single Base Substitution C-T INTRON HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN970-S.SNP.9:3487371 chr09:003487371 0 W/3487371-3487371 FN970-S Single Base Substitution C-T INTRON HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN2771-S.SNP.9:3489617 chr09:003489617 0 W/3489617-3489617 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.9524;DP=4220;DP4=2180,1721,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000473934;MQB=6.35123e-05;MQSB=0.00304371;RPB=0.598585;SGB=-9.66994;VDB=0.442652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.9:3492686 chr09:003492686 0 W/3492686-3492686 FN1129-S Single Base Substitution A-G INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2661-S.SNP.9:3493491 chr09:003493491 0 W/3493491-3493491 FN2661-S SNP A -> T AC=1;AN=200;BQB=0.976286;DP=4711;DP4=2061,2476,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.38165e-11;MQSB=0.999808;RPB=0.216572;SGB=81.8956;VDB=0.560322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.9:3494189 chr09:003494189 0 W/3494189-3494189 FN2683-S SNP G -> C AC=1;AN=200;BQB=0.725098;DP=4749;DP4=2147,2363,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47682e-16;MQSB=0.966297;RPB=0.436336;SGB=90.7419;VDB=0.202536;EFF=UTR_3_PRIME(MODIFIER||367||58|LOC_Os09g07154|protein_coding|CODING|LOC_Os09g07154.1|3|1) FN-393.SNP.9:3507235 chr09:003507235 0 W/3507235-3507235 FN-393 Single Base Substitution G-T INTERGENIC HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3302-S.SNP.9:3510438 chr09:003510438 0 W/3510438-3510438 FN3302-S SNP A -> G AC=2;AN=184;BQB=0.943222;DP=2866;DP4=1513,1202,11,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23913e-10;MQSB=0.681917;RPB=0.9955;SGB=38.4058;VDB=0.835196;EFF=INTRON(MODIFIER||||940|LOC_Os09g07170|protein_coding|CODING|LOC_Os09g07170.1|1|1) FN3875-S.SNP.9:3510568 chr09:003510568 0 W/3510568-3510568 FN3875-S SNP C -> T AC=1;AN=158;BQB=0.660806;DP=2072;DP4=997,1011,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.01652e-07;MQSB=0.989837;RPB=0.45355;SGB=64.5449;VDB=0.456713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P32S|940|LOC_Os09g07170|protein_coding|CODING|LOC_Os09g07170.1|2|1) FN2181-S.SNP.9:3513546 chr09:003513546 0 W/3513546-3513546 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.996674;DP=4711;DP4=2444,2053,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01078e-09;MQSB=0.202743;RPB=0.59574;SGB=76.4186;VDB=0.930801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V347I|940|LOC_Os09g07170|protein_coding|CODING|LOC_Os09g07170.1|6|1) FN_777-2-1.SNP.9:3517659 chr09:003517659 0 W/3517659-3517659 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN2553-S.SNP.9:3522097 chr09:003522097 0 W/3522097-3522097 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.580452;DP=4565;DP4=2333,2042,20,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00523e-17;MQSB=0.761397;RPB=0.195574;SGB=57.8907;VDB=0.898516;EFF=INTRON(MODIFIER||||332|LOC_Os09g07180|protein_coding|CODING|LOC_Os09g07180.1|1|1) FN2595-S.SNP.9:3522423 chr09:003522423 0 W/3522423-3522423 FN2595-S SNP C -> T AC=2;AN=198;BQB=0.993874;DP=4149;DP4=1709,2215,14,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.4809e-17;MQSB=0.833264;RPB=0.645326;SGB=136.856;VDB=0.271718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A33T|332|LOC_Os09g07180|protein_coding|CODING|LOC_Os09g07180.1|1|1) FN2583-S.SNP.9:3523158 chr09:003523158 0 W/3523158-3523158 FN2583-S SNP G -> C AC=1;AN=200;BQB=0.884724;DP=4588;DP4=2371,1996,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69457e-16;MQSB=0.831432;RPB=0.81822;SGB=90.7419;VDB=0.531883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.9:3524223 chr09:003524223 0 W/3524223-3524223 FN-13 Single Base Substitution A-T INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.9:3524227 chr09:003524227 0 W/3524227-3524227 FN-13 Single Base Substitution C-A INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN2082-S.SNP.9:3527943 chr09:003527943 0 W/3527943-3527943 FN2082-S SNP A -> T AC=1;AN=168;BQB=0.289409;DP=3910;DP4=2132,1741,17,10;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0754476;MQB=0.643721;MQSB=1.83043e-14;RPB=0.936818;SGB=-42.92;VDB=0.911844;EFF=INTERGENIC(MODIFIER||||||||||1) FN-401.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN-401 Single Base Substitution G-A INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN1022-S.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2595-S.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN2595-S SNP G -> A AC=2;AN=198;BQB=0.588349;DP=3988;DP4=1621,2090,10,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000250752;MQB=1.34092e-13;MQSB=0.961528;RPB=0.959088;SGB=86.8856;VDB=0.888232;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN2698-S SNP G -> A AC=1;AN=200;BQB=0.535123;DP=4921;DP4=2075,2493,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05226e-07;MQSB=0.849672;RPB=0.771442;SGB=16.4591;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN3050-S SNP G -> A AC=2;AN=184;BQB=0.962974;DP=4405;DP4=2010,2290,13,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.46119e-19;MQSB=0.89047;RPB=0.247381;SGB=31.1509;VDB=0.844163;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.9:3528595 chr09:003528595 0 W/3528595-3528595 FN401-S Single Base Substitution G-A INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN1375-S.SNP.9:3533461 chr09:003533461 0 W/3533461-3533461 FN1375-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g07220 retrotransposon protein, putative, unclassified, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN858-S.SNP.9:3534477 chr09:003534477 0 W/3534477-3534477 FN858-S Single Base Substitution C-G INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN2664-S.SNP.9:3542439 chr09:003542439 0 W/3542439-3542439 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.888145;DP=4173;DP4=2143,1794,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.17116e-15;MQSB=0.992803;RPB=0.991885;SGB=47.7211;VDB=0.820274;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P839L|1230|LOC_Os09g07230|protein_coding|CODING|LOC_Os09g07230.1|8|1) FN2267-S.SNP.9:3545029 chr09:003545029 0 W/3545029-3545029 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.505452;DP=4887;DP4=2287,2247,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204625;MQB=2.12106e-09;MQSB=0.974835;RPB=0.519238;SGB=11.8805;VDB=0.74324;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.9:3548093 chr09:003548093 0 W/3548093-3548093 FN891-S Single Base Substitution C-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. W416-6-1.SNP.9:3552901 chr09:003552901 0 W/3552901-3552901 W416-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1484-S.SNP.9:3558922 chr09:003558922 0 W/3558922-3558922 FN1484-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g07250 retrotransposon protein, putative, unclassified, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN900-S.SNP.9:3559707 chr09:003559707 0 W/3559707-3559707 FN900-S Single Base Substitution C-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN-218.SNP.9:3562913 chr09:003562913 0 W/3562913-3562913 FN-218 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN4183-S.SNP.9:3563115 chr09:003563115 0 W/3563115-3563115 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.937372;DP=2558;DP4=1316,1164,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.34693e-06;MQSB=0.840846;RPB=0.579511;SGB=34.5445;VDB=0.0653842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A622V|1241|LOC_Os09g07270|protein_coding|CODING|LOC_Os09g07270.1|5|1) FN1631-S.SNP.9:3564110 chr09:003564110 0 W/3564110-3564110 FN1631-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g07270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3591-S.SNP.9:3567356 chr09:003567356 0 W/3567356-3567356 FN3591-S SNP A -> G AC=1;AN=188;BQB=0.890899;DP=3021;DP4=1398,1551,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.63649e-16;MQSB=0.750026;RPB=0.993988;SGB=108.042;VDB=0.0148273;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.9:3567358 chr09:003567358 0 W/3567358-3567358 FN3591-S SNP G -> A AC=1;AN=188;BQB=0.867509;DP=3021;DP4=1392,1550,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7702e-16;MQSB=0.805045;RPB=0.795323;SGB=108.042;VDB=0.02844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.9:3568206 chr09:003568206 0 W/3568206-3568206 FN1287-S Single Base Substitution C-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3674-S.SNP.9:3569684 chr09:003569684 0 W/3569684-3569684 FN3674-S SNP G -> A AC=2;AN=190;BQB=0.965212;DP=2493;DP4=1385,974,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.37162e-12;MQSB=0.594867;RPB=0.822113;SGB=71.6393;VDB=0.349253;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.9:3569918 chr09:003569918 0 W/3569918-3569918 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.973557;DP=2899;DP4=1305,1523,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.27513e-05;MQSB=0.973648;RPB=0.911052;SGB=34.5445;VDB=0.707824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1555-S.SNP.9:3582208 chr09:003582208 0 W/3582208-3582208 FN1555-S Single Base Substitution C-T INTRON HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN3628-S.SNP.9:3582748 chr09:003582748 0 W/3582748-3582748 FN3628-S SNP G -> A AC=1;AN=190;BQB=0.959735;DP=2279;DP4=1024,1162,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.10605e-05;MQSB=0.933321;RPB=0.244873;SGB=35.4339;VDB=0.259208;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q272*|356|LOC_Os09g07290|protein_coding|CODING|LOC_Os09g07290.1|2|1);LOF=(LOC_Os09g07290|LOC_Os09g07290|1|1.00);NMD=(LOC_Os09g07290|LOC_Os09g07290|1|1.00) FN1422-S.SNP.9:3590549 chr09:003590549 0 W/3590549-3590549 FN1422-S Single Base Substitution T-C INTRON HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN-185.SNP.9:3608840 chr09:003608840 0 W/3608840-3608840 FN-185 Single Base Substitution G-A INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2268-S.SNP.9:3615469 chr09:003615469 0 W/3615469-3615469 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.412211;DP=4031;DP4=2032,1671,15,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20525e-12;MQSB=0.159211;RPB=0.646529;SGB=56.8601;VDB=0.416475;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.9:3616042 chr09:003616042 0 W/3616042-3616042 FN1309-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN692-S.SNP.9:3618784 chr09:003618784 0 W/3618784-3618784 FN692-S Single Base Substitution C-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN4020-S.SNP.9:3622656 chr09:003622656 0 W/3622656-3622656 FN4020-S SNP T -> G AC=1;AN=168;BQB=0.982362;DP=2453;DP4=1177,1116,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.28293e-10;MQSB=0.961852;RPB=0.221667;SGB=74.3269;VDB=0.465772;EFF=UTR_3_PRIME(MODIFIER||282||176|LOC_Os09g07320|protein_coding|CODING|LOC_Os09g07320.2|4|1),INTRON(MODIFIER||||190|LOC_Os09g07320|protein_coding|CODING|LOC_Os09g07320.1|4|1) FN1279-S.SNP.9:3629749 chr09:003629749 0 W/3629749-3629749 FN1279-S Single Base Substitution A-G INTRON HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2221-S.SNP.9:3633960 chr09:003633960 0 W/3633960-3633960 FN2221-S SNP T -> G AC=1;AN=190;BQB=0.994556;DP=5193;DP4=2181,2632,16,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15391e-14;MQSB=0.570056;RPB=0.44541;SGB=56.8601;VDB=0.374478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.9:3636624 chr09:003636624 0 W/3636624-3636624 FN3460-S SNP C -> A AC=1;AN=184;BQB=0.590576;DP=2498;DP4=1105,1313,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000204888;MQSB=0.995043;RPB=0.593028;SGB=18.1394;VDB=0.369149;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.9:3637961 chr09:003637961 0 W/3637961-3637961 FN1154-S Single Base Substitution G-A INTERGENIC HET SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN-211.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN-211 Single Base Substitution A-G INTERGENIC HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1180-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN1180-S Single Base Substitution A-G INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1488-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN1488-S Single Base Substitution A-G INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1585-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN1585-S Single Base Substitution A-G INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3809-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN3809-S SNP A -> G AC=2;AN=190;BQB=0.900868;DP=2465;DP4=613,1695,1,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.04935e-06;MQSB=0.173113;RPB=0.79447;SGB=53.6492;VDB=0.406435;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN4151-S SNP A -> G AC=2;AN=170;BQB=0.955815;DP=2269;DP4=654,1490,6,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.85869e-16;MQSB=0.263603;RPB=0.974192;SGB=123.397;VDB=0.778005;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN856-S Single Base Substitution A-G INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN989-S.SNP.9:3643453 chr09:003643453 0 W/3643453-3643453 FN989-S Single Base Substitution A-G INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3964-S.SNP.9:3655521 chr09:003655521 0 W/3655521-3655521 FN3964-S SNP C -> T AC=1;AN=168;BQB=0.475588;DP=2712;DP4=1304,1231,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55658e-12;MQSB=0.268799;RPB=0.809663;SGB=127.497;VDB=0.634269;EFF=INTRON(MODIFIER||||401|LOC_Os09g07350|protein_coding|CODING|LOC_Os09g07350.1|1|1) FN475-S.SNP.9:3659553 chr09:003659553 0 W/3659553-3659553 FN475-S Single Base Substitution G-A INTRON HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN3901-S.SNP.9:3667117 chr09:003667117 0 W/3667117-3667117 FN3901-S SNP C -> T AC=1;AN=158;BQB=0.992235;DP=2459;DP4=1213,1161,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.4032e-11;MQSB=0.882144;RPB=0.95729;SGB=50.9207;VDB=0.901215;EFF=SPLICE_SITE_REGION(LOW||||66|LOC_Os09g07370|protein_coding|CODING|LOC_Os09g07370.1|2|1),INTRON(MODIFIER||||66|LOC_Os09g07370|protein_coding|CODING|LOC_Os09g07370.1|2|1) FN3901-S.SNP.9:3667118 chr09:003667118 0 W/3667118-3667118 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.986371;DP=2457;DP4=1206,1126,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.01078e-13;MQSB=0.861835;RPB=0.997199;SGB=33.2965;VDB=0.926015;EFF=SPLICE_SITE_REGION(LOW||||66|LOC_Os09g07370|protein_coding|CODING|LOC_Os09g07370.1|2|1),INTRON(MODIFIER||||66|LOC_Os09g07370|protein_coding|CODING|LOC_Os09g07370.1|2|1) FN1118-S.SNP.9:3673900 chr09:003673900 0 W/3673900-3673900 FN1118-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g07380 frigida, putative, expressed SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2359.SNP.9:3677049 chr09:003677049 0 W/3677049-3677049 FN2359 SNP A -> G AC=1;AN=192;BQB=0.997512;DP=4068;DP4=1740,1748,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.11868e-07;MQSB=0.767112;RPB=0.857939;SGB=5.79046;VDB=0.614059;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S170|278|LOC_Os09g07390|protein_coding|CODING|LOC_Os09g07390.1|1|1) FN2407.SNP.9:3678259 chr09:003678259 0 W/3678259-3678259 FN2407 SNP G -> C AC=2;AN=200;BQB=0.838771;DP=3823;DP4=1818,1734,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.56172e-19;MQSB=0.673548;RPB=0.770406;SGB=86.7987;VDB=0.66871;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.9:3685898 chr09:003685898 0 W/3685898-3685898 FN4155-S SNP C -> A AC=1;AN=170;BQB=0.980017;DP=2612;DP4=1368,1193,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00995406;MQB=0.0164441;MQSB=4.21803e-05;RPB=0.330893;SGB=21.1076;VDB=0.283505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P959T|1475|LOC_Os09g07410|protein_coding|CODING|LOC_Os09g07410.1|3|1) FN3970-S.SNP.9:3688726 chr09:003688726 0 W/3688726-3688726 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.724883;DP=2560;DP4=1328,1142,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00625;MQB=1.40978e-06;MQSB=0.622363;RPB=0.755128;SGB=29.4772;VDB=0.361542;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.9:3689325 chr09:003689325 0 W/3689325-3689325 FN-203 Single Base Substitution C-T INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN888-S.SNP.9:3690087 chr09:003690087 0 W/3690087-3690087 FN888-S Single Base Substitution A-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN-128.SNP.9:3690849 chr09:003690849 0 W/3690849-3690849 FN-128 Single Base Substitution G-A INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. W313-1-1-1-1.SNP.9:3700541 chr09:003700541 0 W/3700541-3700541 W313-1-1-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN916-S.SNP.9:3701641 chr09:003701641 0 W/3701641-3701641 FN916-S Single Base Substitution A-C INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN_N1-130-1.SNP.9:3705490 chr09:003705490 0 W/3705490-3705490 FN_N1-130-1 Single Base Substitution T-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN2226-S.SNP.9:3709046 chr09:003709046 0 W/3709046-3709046 FN2226-S SNP C -> T AC=1;AN=190;BQB=0.528994;DP=4831;DP4=2425,1922,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02364e-05;MQSB=0.983623;RPB=0.998294;SGB=7.21887;VDB=0.700088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.9:3711530 chr09:003711530 0 W/3711530-3711530 FN1104-S Single Base Substitution A-T INTRON HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2121-S.SNP.9:3711853 chr09:003711853 0 W/3711853-3711853 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.88399;DP=3329;DP4=1681,1608,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02037e-13;MQSB=0.996777;RPB=0.456581;SGB=69.0561;VDB=0.0897892;EFF=INTRON(MODIFIER||||1059|LOC_Os09g07430|protein_coding|CODING|LOC_Os09g07430.1|1|1) 701-3.SNP.9:3715713 chr09:003715713 0 W/3715713-3715713 701-3 Single Base Substitution T-G INTERGENIC HET SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN4247-S.SNP.9:3728004 chr09:003728004 0 W/3728004-3728004 FN4247-S SNP G -> A AC=1;AN=170;BQB=0.702644;DP=2229;DP4=1245,926,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.36468e-06;MQSB=0.904211;RPB=0.255673;SGB=34.878;VDB=0.109917;EFF=INTRON(MODIFIER||||202|LOC_Os09g07450|protein_coding|CODING|LOC_Os09g07450.1|5|1) FN2472.SNP.9:3738143 chr09:003738143 0 W/3738143-3738143 FN2472 SNP C -> T AC=1;AN=200;BQB=0.662102;DP=4525;DP4=2157,2021,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220994;MQB=8.81575e-07;MQSB=0.985512;RPB=0.834455;SGB=16.4591;VDB=0.0924411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.9:3750689 chr09:003750689 0 W/3750689-3750689 FN3477-S SNP G -> A AC=1;AN=184;BQB=0.923405;DP=2926;DP4=1320,1535,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35454e-10;MQSB=0.859907;RPB=0.920879;SGB=66.8296;VDB=0.853356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.9:3750834 chr09:003750834 0 W/3750834-3750834 FN3902-S SNP G -> T AC=2;AN=158;BQB=0.911212;DP=2334;DP4=1129,1095,10,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.82238e-15;MQSB=0.734129;RPB=0.778528;SGB=52.2521;VDB=0.105031;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.9:3750995 chr09:003750995 0 W/3750995-3750995 FN4129-S SNP A -> C AC=1;AN=182;BQB=0.829077;DP=3020;DP4=1480,1412,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.15418e-05;MQSB=0.94049;RPB=0.58946;SGB=25.0952;VDB=0.690639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.9:3761729 chr09:003761729 0 W/3761729-3761729 FN2301 SNP A -> G AC=1;AN=192;BQB=0.998608;DP=5128;DP4=2443,2478,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.25761e-08;MQSB=0.986625;RPB=0.482321;SGB=2.66176;VDB=0.712113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V223A|587|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V223A|587|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V223A|583|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.3|4|1) FN3858-S.SNP.9:3762542 chr09:003762542 0 W/3762542-3762542 FN3858-S SNP T -> G AC=1;AN=158;BQB=0.74967;DP=2524;DP4=1210,1218,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.01307e-06;MQSB=0.974429;RPB=0.994885;SGB=27.3346;VDB=0.00225997;EFF=INTRON(MODIFIER||||587|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.1|2|1),INTRON(MODIFIER||||587|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.2|2|1),INTRON(MODIFIER||||583|LOC_Os09g07510|protein_coding|CODING|LOC_Os09g07510.3|2|1) FN-325.SNP.9:3763247 chr09:003763247 0 W/3763247-3763247 FN-325 Single Base Substitution A-C UTR_5_PRIME HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN3525-S.SNP.9:3770182 chr09:003770182 0 W/3770182-3770182 FN3525-S SNP G -> A AC=2;AN=188;BQB=0.933982;DP=3405;DP4=1573,1774,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.87472e-10;MQSB=0.821395;RPB=0.195633;SGB=67.1521;VDB=0.387675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.9:3771714 chr09:003771714 0 W/3771714-3771714 FN1646-S Single Base Substitution G-A INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2151-S.SNP.9:3772425 chr09:003772425 0 W/3772425-3772425 FN2151-S SNP T -> C AC=1;AN=168;BQB=0.998899;DP=3189;DP4=1818,1329,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000313578;MQB=0.00373239;MQSB=0.422491;RPB=0.537073;SGB=7.05233;VDB=0.277406;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T276|345|LOC_Os09g07530|protein_coding|CODING|LOC_Os09g07530.1|4|1) FN2334.SNP.9:3780129 chr09:003780129 0 W/3780129-3780129 FN2334 SNP C -> T AC=1;AN=192;BQB=0.999544;DP=4787;DP4=2241,2280,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.67581e-08;MQSB=0.871132;RPB=0.778418;SGB=43.3444;VDB=0.972288;EFF=INTRON(MODIFIER||||789|LOC_Os09g07540|protein_coding|CODING|LOC_Os09g07540.1|4|1) FN3362-S.SNP.9:3782936 chr09:003782936 0 W/3782936-3782936 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.992469;DP=3483;DP4=1797,1595,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75387e-07;MQSB=0.997248;RPB=0.958976;SGB=53.2642;VDB=0.599178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R38Q|789|LOC_Os09g07540|protein_coding|CODING|LOC_Os09g07540.1|1|1) FN1630-S.SNP.9:3785355 chr09:003785355 0 W/3785355-3785355 FN1630-S Single Base Substitution G-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN-39.SNP.9:3787531 chr09:003787531 0 W/3787531-3787531 FN-39 Single Base Substitution A-G INTERGENIC Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN3863-S.SNP.9:3787683 chr09:003787683 0 W/3787683-3787683 FN3863-S SNP T -> C AC=1;AN=158;BQB=0.95905;DP=2325;DP4=1168,1034,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000430108;MQB=1.73029e-08;MQSB=0.98627;RPB=0.555275;SGB=26.1881;VDB=0.0451003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.9:3789088 chr09:003789088 0 W/3789088-3789088 FN1483-S Single Base Substitution C-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN-123.SNP.9:3796667 chr09:003796667 0 W/3796667-3796667 FN-123 Single Base Substitution A-G INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. W443-5-1-3.SNP.9:3799350 chr09:003799350 0 W/3799350-3799350 W443-5-1-3 Single Base Substitution A-G INTRON HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN3480-S.SNP.9:3811403 chr09:003811403 0 W/3811403-3811403 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.964555;DP=2521;DP4=1129,1310,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.25153e-10;MQSB=0.999758;RPB=0.940773;SGB=62.3078;VDB=0.932253;EFF=INTRON(MODIFIER||||391|LOC_Os09g07600|protein_coding|CODING|LOC_Os09g07600.1|7|1) FN1673-S.SNP.9:3814981 chr09:003814981 0 W/3814981-3814981 FN1673-S SNP T -> A AC=1;AN=188;BQB=0.00141887;DP=3596;DP4=1678,1869,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.63988e-08;MQSB=0.990559;RPB=0.552196;SGB=-153.343;VDB=0.0665622;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.9:3817144 chr09:003817144 0 W/3817144-3817144 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.957736;DP=2424;DP4=1187,1162,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.26905e-10;MQSB=0.817326;RPB=0.942421;SGB=65.4653;VDB=0.971004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P182S|1161|LOC_Os09g07610|protein_coding|CODING|LOC_Os09g07610.1|3|1) FN1275-S.SNP.9:3831409 chr09:003831409 0 W/3831409-3831409 FN1275-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN3930-S.SNP.9:3831868 chr09:003831868 0 W/3831868-3831868 FN3930-S SNP T -> G AC=1;AN=158;BQB=0.655737;DP=2765;DP4=1493,1145,14,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.99852e-13;MQSB=0.981756;RPB=0.955989;SGB=49.8826;VDB=0.959683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.9:3832863 chr09:003832863 0 W/3832863-3832863 FN2380 SNP C -> T AC=1;AN=192;BQB=0.125603;DP=4891;DP4=2518,1959,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.67099e-10;MQSB=0.63027;RPB=0.773647;SGB=-39.6843;VDB=0.799572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.9:3836553 chr09:003836553 0 W/3836553-3836553 FN3665-S SNP C -> A AC=1;AN=190;BQB=0.458716;DP=2523;DP4=1105,1316,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60481e-10;MQSB=0.643719;RPB=0.970685;SGB=46.6446;VDB=0.858663;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.9:3841916 chr09:003841916 0 W/3841916-3841916 FN266-S Single Base Substitution C-A INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN4021-S.SNP.9:3844333 chr09:003844333 0 W/3844333-3844333 FN4021-S SNP A -> T AC=1;AN=168;BQB=0.977246;DP=3031;DP4=1843,950,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000989772;MQB=1.23904e-06;MQSB=0.00268869;RPB=0.797213;SGB=19.7539;VDB=0.793023;EFF=INTRON(MODIFIER||||1296|LOC_Os09g07640|protein_coding|CODING|LOC_Os09g07640.1|1|1) FN2246-S.SNP.9:3848765 chr09:003848765 0 W/3848765-3848765 FN2246-S SNP G -> T AC=1;AN=190;BQB=0.686698;DP=5044;DP4=2251,2448,6,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31708e-15;MQSB=0.586743;RPB=0.998139;SGB=56.8601;VDB=0.734174;EFF=INTRON(MODIFIER||||1296|LOC_Os09g07640|protein_coding|CODING|LOC_Os09g07640.1|4|1) FN514-S.SNP.9:3861604 chr09:003861604 0 W/3861604-3861604 FN514-S Single Base Substitution C-G INTRON HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1435-S.SNP.9:3866529 chr09:003866529 0 W/3866529-3866529 FN1435-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1134-S.SNP.9:3868213 chr09:003868213 0 W/3868213-3868213 FN1134-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g07670 white-brown complex homolog protein 11, putative, expressed SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN3382-S.SNP.9:3873116 chr09:003873116 0 W/3873116-3873116 FN3382-S SNP C -> T AC=2;AN=184;BQB=0.994284;DP=3727;DP4=1795,1834,25,18;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00402468;MQB=3.64118e-22;MQSB=0.980841;RPB=0.476965;SGB=141.402;VDB=0.278286;EFF=INTRON(MODIFIER||||1417|LOC_Os09g07680|protein_coding|CODING|LOC_Os09g07680.1|2|1) W470-2-1.SNP.9:3875475 chr09:003875475 0 W/3875475-3875475 W470-2-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g07680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN3294-S.SNP.9:3880192 chr09:003880192 0 W/3880192-3880192 FN3294-S SNP C -> T AC=2;AN=184;BQB=0.911153;DP=2793;DP4=1416,1274,16,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.25185e-20;MQSB=0.67211;RPB=0.587545;SGB=152.744;VDB=0.690437;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L347|740|LOC_Os09g07690|protein_coding|CODING|LOC_Os09g07690.1|2|1) FN2438.SNP.9:3882207 chr09:003882207 0 W/3882207-3882207 FN2438 SNP C -> T AC=2;AN=200;BQB=0.498639;DP=4757;DP4=2133,2286,21,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000210217;MQB=9.44099e-21;MQSB=0.362324;RPB=0.714324;SGB=134.004;VDB=0.535947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.9:3889787 chr09:003889787 0 W/3889787-3889787 FN3454-S SNP G -> A AC=1;AN=184;BQB=0.657082;DP=3074;DP4=1563,1373,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.38754e-07;MQSB=0.936227;RPB=0.233321;SGB=23.2751;VDB=0.697039;EFF=INTRON(MODIFIER||||273|LOC_Os09g07700|protein_coding|CODING|LOC_Os09g07700.1|1|1) FN588-S.SNP.9:3890823 chr09:003890823 0 W/3890823-3890823 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3473-S.SNP.9:3893065 chr09:003893065 0 W/3893065-3893065 FN3473-S SNP G -> A AC=1;AN=184;BQB=0.934604;DP=3460;DP4=1725,1637,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000289017;MQB=5.60629e-05;MQSB=0.0829261;RPB=0.53467;SGB=33.3622;VDB=0.990259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.9:3899692 chr09:003899692 0 W/3899692-3899692 FN1443-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g07730 expressed protein SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN-314.SNP.9:3902068 chr09:003902068 0 W/3902068-3902068 FN-314 Single Base Substitution A-G INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN3710-S.SNP.9:3902792 chr09:003902792 0 W/3902792-3902792 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.734912;DP=2884;DP4=1467,1291,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.50341e-05;MQSB=0.944049;RPB=0.909972;SGB=28.9929;VDB=0.171769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.9:3903709 chr09:003903709 0 W/3903709-3903709 FN3369-S SNP A -> T AC=1;AN=184;BQB=0.886272;DP=2655;DP4=1368,1177,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.66234e-11;MQSB=0.969901;RPB=0.728379;SGB=89.4385;VDB=0.10243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.9:3903748 chr09:003903748 0 W/3903748-3903748 FN2740-S SNP T -> G AC=1;AN=200;BQB=0.884139;DP=4826;DP4=2403,2192,20,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.02453e-17;MQSB=0.940903;RPB=0.83302;SGB=127.947;VDB=0.71324;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.9:3903886 chr09:003903886 0 W/3903886-3903886 FN1388-S Single Base Substitution C-T INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1049-S.SNP.9:3907642 chr09:003907642 0 W/3907642-3907642 FN1049-S Single Base Substitution C-T INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2267-S.SNP.9:3908623 chr09:003908623 0 W/3908623-3908623 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.755383;DP=5461;DP4=2695,2398,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0254532;MQB=0.00464499;MQSB=1.11257e-15;RPB=0.999999;SGB=68.0854;VDB=0.0304228;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N1026|1101|LOC_Os09g07740|protein_coding|CODING|LOC_Os09g07740.1|4|1) FN2305.SNP.9:3910652 chr09:003910652 0 W/3910652-3910652 FN2305 SNP C -> T AC=1;AN=192;BQB=0.986091;DP=4999;DP4=2239,2532,5,27;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0122024;MQB=1.97427e-09;MQSB=0.614583;RPB=0.0051943;SGB=-554.126;VDB=0.641047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R350K|1101|LOC_Os09g07740|protein_coding|CODING|LOC_Os09g07740.1|4|1) FN4041-S.SNP.9:3912786 chr09:003912786 0 W/3912786-3912786 FN4041-S SNP G -> A AC=1;AN=168;BQB=0.964037;DP=2837;DP4=1129,1638,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.010927;MQB=3.04772e-05;MQSB=1.97963e-05;RPB=0.713638;SGB=24.4556;VDB=0.587338;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.9:3949170 chr09:003949170 0 W/3949170-3949170 FN1338-S Single Base Substitution C-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2354.SNP.9:3950756 chr09:003950756 0 W/3950756-3950756 FN2354 SNP C -> G AC=1;AN=192;BQB=0.726347;DP=4985;DP4=2595,2068,5,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.03475e-05;MQSB=0.917261;RPB=0.987084;SGB=30.9536;VDB=0.152401;EFF=INTRON(MODIFIER||||171|LOC_Os09g07800|protein_coding|CODING|LOC_Os09g07800.1|1|1) FN3861-S.SNP.9:3959263 chr09:003959263 0 W/3959263-3959263 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.995141;DP=2260;DP4=1001,1176,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.01715e-06;MQSB=0.966883;RPB=0.357922;SGB=14.3409;VDB=0.095834;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.9:3969132 chr09:003969132 0 W/3969132-3969132 FN955-S Single Base Substitution T-A INTERGENIC HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN570-S.SNP.9:3972029 chr09:003972029 0 W/3972029-3972029 FN570-S Single Base Substitution A-T INTRON HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN1304-S.SNP.9:3974206 chr09:003974206 0 W/3974206-3974206 FN1304-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g07830 acetyl-CoA acetyltransferase, cytosolic, putative, expressed SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1333-S.SNP.9:3974357 chr09:003974357 0 W/3974357-3974357 FN1333-S Single Base Substitution A-G INTRON HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2483.SNP.9:3976002 chr09:003976002 0 W/3976002-3976002 FN2483 SNP T -> A AC=1;AN=200;BQB=0.853443;DP=4321;DP4=2251,1897,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03969e-12;MQSB=0.0213751;RPB=0.911364;SGB=19.1209;VDB=0.195328;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.9:3981344 chr09:003981344 0 W/3981344-3981344 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN2454.SNP.9:3981918 chr09:003981918 0 W/3981918-3981918 FN2454 SNP C -> G AC=1;AN=200;BQB=0.816816;DP=5063;DP4=2401,2315,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11457e-07;MQSB=0.806484;RPB=0.490459;SGB=29.4541;VDB=0.177966;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.9:3983216 chr09:003983216 0 W/3983216-3983216 FN3868-S SNP T -> A AC=2;AN=158;BQB=0.786767;DP=2768;DP4=1234,1292,8,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.14335e-08;MQSB=0.99445;RPB=0.43137;SGB=7.56394;VDB=0.377368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.9:3988989 chr09:003988989 0 W/3988989-3988989 FN2447 SNP C -> T AC=1;AN=200;BQB=0.499489;DP=4654;DP4=2278,2091,7,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000214869;MQB=0.00110334;MQSB=0.839122;RPB=0.999721;SGB=13.8539;VDB=0.39833;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R485K|1190|LOC_Os09g07850|protein_coding|CODING|LOC_Os09g07850.1|6|1) FN-8.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN-8 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 8, Mutant_ID: FN-8, Generation: M2, Mutations: 41, Genes: 15, Seed availability: Yes. FN1014-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN1014-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1202-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN1202-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1317-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN1317-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN1561-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN1561-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2126-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN2126-S SNP C -> T AC=2;AN=168;BQB=0.260312;DP=2312;DP4=949,1292,17,24;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00735294;MQB=3.83115e-14;MQSB=0.771374;RPB=0.664802;SGB=121.192;VDB=0.959145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3057-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.989309;DP=3384;DP4=1618,1649,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00472813;MQB=7.894e-13;MQSB=0.995533;RPB=0.991247;SGB=74.4875;VDB=0.619278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3387-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3387-S SNP C -> T AC=1;AN=184;BQB=0.999523;DP=3243;DP4=1529,1633,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00616713;MQB=1.28214e-10;MQSB=0.881486;RPB=0.344973;SGB=30.8405;VDB=0.24149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3554-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3554-S SNP C -> T AC=2;AN=188;BQB=0.998028;DP=3150;DP4=1436,1619,16,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00444444;MQB=2.02381e-24;MQSB=0.990419;RPB=0.741912;SGB=149.37;VDB=0.825153;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3705-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3705-S SNP C -> T AC=1;AN=190;BQB=0.983439;DP=2927;DP4=1291,1512,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00614964;MQB=1.66707e-05;MQSB=0.70998;RPB=0.947123;SGB=44.5415;VDB=0.406086;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3785-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3785-S SNP C -> T AC=1;AN=190;BQB=0.99997;DP=3254;DP4=1476,1668,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00522434;MQB=1.78106e-08;MQSB=0.955137;RPB=0.570846;SGB=58.2031;VDB=0.757462;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN3994-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN3994-S SNP C -> T AC=1;AN=168;BQB=0.88266;DP=2993;DP4=1335,1518,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00701637;MQB=3.41302e-11;MQSB=0.864937;RPB=0.453108;SGB=34.3388;VDB=0.896177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A579T|772|LOC_Os09g07860|protein_coding|CODING|LOC_Os09g07860.1|2|1) FN846-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN846-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN910-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN910-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN957-S.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 FN957-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. W500-4-7-1.SNP.9:3997712 chr09:003997712 0 W/3997712-3997712 W500-4-7-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g07860 retrotransposon protein, putative, unclassified SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN-118.SNP.9:4005627 chr09:004005627 0 W/4005627-4005627 FN-118 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g07880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN2618-S.SNP.9:4007632 chr09:004007632 0 W/4007632-4007632 FN2618-S SNP C -> T AC=1;AN=198;BQB=0.631833;DP=3966;DP4=1949,1833,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04989e-13;MQSB=0.926984;RPB=0.573782;SGB=68.91;VDB=0.549891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R535W|623|LOC_Os09g07880|protein_coding|CODING|LOC_Os09g07880.1|8|1) FN669-S.SNP.9:4010583 chr09:004010583 0 W/4010583-4010583 FN669-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1468-S.SNP.9:4018404 chr09:004018404 0 W/4018404-4018404 FN1468-S Single Base Substitution A-C INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN3775-S.SNP.9:4018815 chr09:004018815 0 W/4018815-4018815 FN3775-S SNP C -> G AC=1;AN=190;BQB=0.341809;DP=2530;DP4=1073,1332,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53753e-07;MQSB=0.928951;RPB=0.989552;SGB=43.2083;VDB=0.316435;EFF=INTRON(MODIFIER||||3647|LOC_Os09g07900|protein_coding|CODING|LOC_Os09g07900.1|1|1) FN1749-S.SNP.9:4021510 chr09:004021510 0 W/4021510-4021510 FN1749-S SNP G -> A AC=1;AN=188;BQB=0.000306193;DP=3936;DP4=2019,1877,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.17833e-07;MQSB=0.955215;RPB=0.734209;SGB=-67.7293;VDB=0.148916;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A570T|3647|LOC_Os09g07900|protein_coding|CODING|LOC_Os09g07900.1|3|1) FN893-S.SNP.9:4034119 chr09:004034119 0 W/4034119-4034119 FN893-S Single Base Substitution T-A INTRON HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3763-S.SNP.9:4036086 chr09:004036086 0 W/4036086-4036086 FN3763-S SNP T -> A AC=2;AN=190;BQB=0.907404;DP=2922;DP4=1395,1394,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.1877e-15;MQSB=0.993716;RPB=0.355104;SGB=112.85;VDB=0.575892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1427-S.SNP.9:4037892 chr09:004037892 0 W/4037892-4037892 FN1427-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN771-S.SNP.9:4044499 chr09:004044499 0 W/4044499-4044499 FN771-S Single Base Substitution A-C INTRON HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN-128.SNP.9:4045418 chr09:004045418 0 W/4045418-4045418 FN-128 Single Base Substitution A-T UTR_3_PRIME HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN_N1-151-7.SNP.9:4053933 chr09:004053933 0 W/4053933-4053933 FN_N1-151-7 Single Base Substitution T-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1340-S.SNP.9:4062920 chr09:004062920 0 W/4062920-4062920 FN1340-S Single Base Substitution T-A INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1623-S.SNP.9:4067243 chr09:004067243 0 W/4067243-4067243 FN1623-S Single Base Substitution C-A INTRON Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2729-S.SNP.9:4076048 chr09:004076048 0 W/4076048-4076048 FN2729-S SNP C -> T AC=1;AN=200;BQB=2.87747e-06;DP=4180;DP4=2085,1651,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000239234;MQB=0.000239573;MQSB=1.05165e-08;RPB=0.172398;SGB=7.88476;VDB=0.525196;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P308|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|2|1) FN1472-S.SNP.9:4076503 chr09:004076503 0 W/4076503-4076503 FN1472-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g07940 retrotransposon protein, putative, unclassified, expressed SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN-345.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN-345 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN-71 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN1093-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1158-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN1158-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2486.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN2486 SNP G -> A AC=2;AN=200;BQB=0.787814;DP=4281;DP4=2085,1940,34,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.63504e-30;MQSB=0.116852;RPB=0.964049;SGB=252.287;VDB=0.0647867;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN2662-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.749028;DP=4781;DP4=2211,2370,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.86398e-14;MQSB=0.592911;RPB=0.181931;SGB=79.9264;VDB=0.179299;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN3345-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN3345-S SNP G -> A AC=2;AN=184;BQB=0.996491;DP=3569;DP4=1492,1967,11,27;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.72781e-23;MQSB=0.862507;RPB=0.90729;SGB=166.309;VDB=0.501955;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN3665-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.876406;DP=2654;DP4=1365,1190,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30926e-10;MQSB=0.815586;RPB=0.972245;SGB=94.6341;VDB=0.41417;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN4063-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN4063-S SNP G -> A AC=1;AN=168;BQB=0.934294;DP=2623;DP4=1278,1241,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04732e-07;MQSB=0.843598;RPB=0.938996;SGB=45.0404;VDB=0.37989;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN4095-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN4095-S SNP G -> A AC=2;AN=182;BQB=0.999955;DP=3242;DP4=1446,1730,7,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.35673e-11;MQSB=0.983824;RPB=0.993073;SGB=75.6874;VDB=0.896142;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N5|883|LOC_Os09g07940|protein_coding|CODING|LOC_Os09g07940.1|1|1) FN627-S.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN627-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN_812-4-1.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 FN_812-4-1 Single Base Substitution G-A Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.9:4076991 chr09:004076991 0 W/4076991-4076991 W453-3-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN3039-S.SNP.9:4077282 chr09:004077282 0 W/4077282-4077282 FN3039-S SNP T -> A AC=1;AN=184;BQB=0.912219;DP=3139;DP4=1282,1683,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63488e-08;MQSB=0.993695;RPB=0.669888;SGB=53.2642;VDB=0.0926592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.9:4078919 chr09:004078919 0 W/4078919-4078919 FN2121-S SNP T -> A AC=1;AN=168;BQB=0.733548;DP=4218;DP4=1727,2436,12,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.79304e-14;MQSB=0.961447;RPB=0.513669;SGB=-10.2027;VDB=0.305071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.9:4080945 chr09:004080945 0 W/4080945-4080945 FN3943-S SNP A -> G AC=1;AN=168;BQB=0.89247;DP=2796;DP4=1412,1273,2,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0171674;MQB=4.19469e-05;MQSB=0.0150034;RPB=0.978257;SGB=52.1728;VDB=0.60361;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.9:4082641 chr09:004082641 0 W/4082641-4082641 FN-411 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g07950 retrotransposon protein, putative, unclassified, expressed SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2496.SNP.9:4085193 chr09:004085193 0 W/4085193-4085193 FN2496 SNP G -> A AC=1;AN=200;BQB=0.962625;DP=4937;DP4=2223,2417,7,6;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0259267;MQB=0.687012;MQSB=2.17696e-10;RPB=0.908658;SGB=19.0642;VDB=0.596958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.9:4086803 chr09:004086803 0 W/4086803-4086803 FN1571-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g07960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-218.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN-218 Single Base Substitution C-T INTRON HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1392-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN1392-S Single Base Substitution C-T INTRON HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1448-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN1448-S Single Base Substitution C-T INTRON HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2205-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN2205-S SNP C -> T AC=2;AN=190;BQB=0.782215;DP=5489;DP4=2419,2711,21,28;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00582984;MQB=3.83116e-17;MQSB=1.78947e-29;RPB=0.993507;SGB=164.04;VDB=0.622416;EFF=INTRON(MODIFIER||||1357|LOC_Os09g07960|protein_coding|CODING|LOC_Os09g07960.1|3|1) FN2379.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN2379 SNP C -> T AC=2;AN=192;BQB=0.774912;DP=5400;DP4=2404,2666,35,36;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00574074;MQB=1.74649e-25;MQSB=2.73327e-26;RPB=0.323651;SGB=318.507;VDB=0.761571;EFF=INTRON(MODIFIER||||1357|LOC_Os09g07960|protein_coding|CODING|LOC_Os09g07960.1|3|1) FN282-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN282-S Single Base Substitution C-T INTRON HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN3311-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN3311-S Single Base Substitution C-T INTRON HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3528-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN3528-S SNP C -> T AC=2;AN=188;BQB=0.999065;DP=3072;DP4=1318,1679,14,20;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00651042;MQB=1.43669e-14;MQSB=3.94973e-10;RPB=0.614189;SGB=148.931;VDB=0.194531;EFF=INTRON(MODIFIER||||1357|LOC_Os09g07960|protein_coding|CODING|LOC_Os09g07960.1|3|1) FN3999-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN3999-S SNP C -> T AC=1;AN=168;BQB=0.985703;DP=2736;DP4=1188,1452,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00621345;MQB=1.11135e-06;MQSB=1.04998e-09;RPB=0.902399;SGB=45.0404;VDB=0.762919;EFF=INTRON(MODIFIER||||1357|LOC_Os09g07960|protein_coding|CODING|LOC_Os09g07960.1|3|1) FN624-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN624-S Single Base Substitution C-T INTRON HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN756-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN756-S Single Base Substitution C-T INTRON HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN895-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN895-S Single Base Substitution C-T INTRON HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN911-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN911-S Single Base Substitution C-T INTRON HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN973-S.SNP.9:4091276 chr09:004091276 0 W/4091276-4091276 FN973-S Single Base Substitution C-T INTRON HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3285-S.SNP.9:4093016 chr09:004093016 0 W/4093016-4093016 FN3285-S SNP G -> T AC=1;AN=184;BQB=0.995316;DP=3702;DP4=2013,1540,16,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29841e-16;MQSB=0.570992;RPB=0.827113;SGB=125.613;VDB=0.146527;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T44K|1357|LOC_Os09g07960|protein_coding|CODING|LOC_Os09g07960.1|1|1) FN-144.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN-144 Single Base Substitution C-G INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-67.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN-67 Single Base Substitution C-G INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN1031-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN1031-S Single Base Substitution C-G INTERGENIC HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1401-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN1401-S Single Base Substitution C-G INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1492-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN1492-S Single Base Substitution C-G INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1702-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN1702-S SNP C -> G AC=1;AN=188;BQB=0.0579356;DP=3801;DP4=1991,1770,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.6419e-07;MQSB=0.997871;RPB=0.402215;SGB=-13.9132;VDB=0.228838;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN2173-S SNP C -> G AC=1;AN=168;BQB=0.00172255;DP=3969;DP4=2052,1862,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.19558e-12;MQSB=0.928317;RPB=0.566024;SGB=25.6529;VDB=0.926672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN3787-S SNP C -> G AC=2;AN=190;BQB=0.998212;DP=2630;DP4=1096,1431,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.43727e-19;MQSB=0.996343;RPB=0.995269;SGB=103.624;VDB=0.000879149;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN4189-S SNP C -> G AC=1;AN=170;BQB=0.993646;DP=2412;DP4=1018,1332,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.21512e-05;MQSB=0.954213;RPB=0.25776;SGB=25.6601;VDB=0.00552276;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN432-S Single Base Substitution C-G INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN533-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN533-S Single Base Substitution C-G INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN626-S.SNP.9:4107808 chr09:004107808 0 W/4107808-4107808 FN626-S Single Base Substitution C-G INTERGENIC HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. W385-6-8-4.SNP.9:4108419 chr09:004108419 0 W/4108419-4108419 W385-6-8-4 Single Base Substitution C-G INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1748-S.SNP.9:4120059 chr09:004120059 0 W/4120059-4120059 FN1748-S SNP G -> A AC=1;AN=188;BQB=0.229495;DP=1905;DP4=830,954,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.90403e-05;MQSB=0.967227;RPB=0.928754;SGB=-79.0704;VDB=0.807779;EFF=INTRON(MODIFIER||||165|LOC_Os09g08000|protein_coding|CODING|LOC_Os09g08000.1|1|1) FN2375.SNP.9:4122282 chr09:004122282 0 W/4122282-4122282 FN2375 SNP C -> T AC=1;AN=192;BQB=0.645815;DP=4236;DP4=1862,2070,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000236072;MQB=3.79202e-10;MQSB=0.980304;RPB=0.442274;SGB=57.6018;VDB=0.0735894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R69H|165|LOC_Os09g08000|protein_coding|CODING|LOC_Os09g08000.1|1|1) FN1692-S.SNP.9:4123649 chr09:004123649 0 W/4123649-4123649 FN1692-S SNP A -> G AC=1;AN=188;BQB=0.031893;DP=2656;DP4=1339,1270,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.2285e-05;MQSB=0.768223;RPB=0.974275;SGB=3.99491;VDB=0.995087;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.9:4125073 chr09:004125073 0 W/4125073-4125073 FN-288 Single Base Substitution C-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN725-S.SNP.9:4125477 chr09:004125477 0 W/4125477-4125477 FN725-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08010 retrotransposon protein, putative, unclassified, expressed SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN499-S.SNP.9:4125878 chr09:004125878 0 W/4125878-4125878 FN499-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g08010 retrotransposon protein, putative, unclassified, expressed SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN-140.SNP.9:4135989 chr09:004135989 0 W/4135989-4135989 FN-140 Single Base Substitution C-G INTRON HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2160-S.SNP.9:4139258 chr09:004139258 0 W/4139258-4139258 FN2160-S SNP T -> C AC=1;AN=168;BQB=2.3297e-06;DP=4434;DP4=2074,2305,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00157606;MQSB=0.999536;RPB=0.648301;SGB=-277.18;VDB=0.831162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.9:4140642 chr09:004140642 0 W/4140642-4140642 FN1222-S Single Base Substitution G-A INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN765-S.SNP.9:4147111 chr09:004147111 0 W/4147111-4147111 FN765-S Single Base Substitution G-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN3368-S.SNP.9:4147353 chr09:004147353 0 W/4147353-4147353 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.971564;DP=3808;DP4=1848,1757,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000262605;MQB=6.45143e-08;MQSB=0.00393854;RPB=0.0340676;SGB=89.4385;VDB=0.397587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.9:4148407 chr09:004148407 0 W/4148407-4148407 FN2449 SNP T -> G AC=1;AN=200;BQB=0.000169393;DP=3142;DP4=1011,1327,6,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00440521;MQSB=0.15187;RPB=0.000107642;SGB=-496.061;VDB=0.516713;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.9:4149028 chr09:004149028 0 W/4149028-4149028 FN499-S Single Base Substitution G-A INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3575-S.SNP.9:4149146 chr09:004149146 0 W/4149146-4149146 FN3575-S SNP G -> A AC=1;AN=188;BQB=0.955296;DP=2933;DP4=1644,1196,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.8375e-07;MQSB=0.76847;RPB=0.997583;SGB=62.6088;VDB=0.0989819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.9:4154020 chr09:004154020 0 W/4154020-4154020 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.035277;DP=4796;DP4=2547,1973,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0314846;MQB=0.0197282;MQSB=0.0349784;RPB=0.738721;SGB=46.7622;VDB=0.879651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A79V|307|LOC_Os09g08050|protein_coding|CODING|LOC_Os09g08050.1|1|1) FN-31.SNP.9:4154764 chr09:004154764 0 W/4154764-4154764 FN-31 Single Base Substitution G-A INTERGENIC Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN1109-S.SNP.9:4154764 chr09:004154764 0 W/4154764-4154764 FN1109-S Single Base Substitution G-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3322-S.SNP.9:4154764 chr09:004154764 0 W/4154764-4154764 FN3322-S SNP G -> A AC=2;AN=184;BQB=0.989045;DP=3490;DP4=1644,1693,13,13;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.0017192;MQB=9.29734e-09;MQSB=0.22603;RPB=0.820891;SGB=112.047;VDB=0.125863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.9:4155116 chr09:004155116 0 W/4155116-4155116 FN-66 Single Base Substitution C-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2558-S.SNP.9:4155116 chr09:004155116 0 W/4155116-4155116 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.85202;DP=4012;DP4=1768,2046,18,22;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00299103;MQB=1.32639e-15;MQSB=0.228793;RPB=0.892124;SGB=133.622;VDB=0.134519;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.9:4155116 chr09:004155116 0 W/4155116-4155116 FN2658-S SNP C -> T AC=2;AN=200;BQB=0.686398;DP=4677;DP4=2078,2351,25,25;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00235194;MQB=1.06914e-18;MQSB=0.603944;RPB=0.184705;SGB=115.456;VDB=0.270665;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.9:4157678 chr09:004157678 0 W/4157678-4157678 FN671-S Single Base Substitution C-G INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-188.SNP.9:4158519 chr09:004158519 0 W/4158519-4158519 FN-188 Single Base Substitution G-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3690-S.SNP.9:4158519 chr09:004158519 0 W/4158519-4158519 FN3690-S SNP G -> A AC=1;AN=190;BQB=0.999914;DP=2633;DP4=1262,1286,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.48858e-06;MQSB=0.875093;RPB=0.92631;SGB=49.0954;VDB=0.737168;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.9:4165307 chr09:004165307 0 W/4165307-4165307 FN1630-S Single Base Substitution C-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1440-S.SNP.9:4167554 chr09:004167554 0 W/4167554-4167554 FN1440-S Single Base Substitution C-T INTRON HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2476.SNP.9:4167554 chr09:004167554 0 W/4167554-4167554 FN2476 SNP C -> T AC=2;AN=200;BQB=0.415053;DP=4235;DP4=2110,1869,24,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.31502e-30;MQSB=0.972755;RPB=0.0710387;SGB=224.656;VDB=0.0374304;EFF=INTRON(MODIFIER||||595|LOC_Os09g08072|protein_coding|CODING|LOC_Os09g08072.1|1|1) FN3628-S.SNP.9:4167954 chr09:004167954 0 W/4167954-4167954 FN3628-S SNP A -> G AC=1;AN=190;BQB=0.620539;DP=2658;DP4=1234,1291,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04303e-07;MQSB=0.938638;RPB=0.933721;SGB=1.00337;VDB=0.461728;EFF=INTRON(MODIFIER||||595|LOC_Os09g08072|protein_coding|CODING|LOC_Os09g08072.1|1|1) W466-5-1.SNP.9:4172622 chr09:004172622 0 W/4172622-4172622 W466-5-1 Single Base Substitution C-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2142-S.SNP.9:4173903 chr09:004173903 0 W/4173903-4173903 FN2142-S SNP C -> T AC=1;AN=168;BQB=0.716448;DP=3666;DP4=1783,1847,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.86762e-09;MQSB=0.689993;RPB=0.775558;SGB=4.1907;VDB=0.31234;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.9:4180385 chr09:004180385 0 W/4180385-4180385 FN-289 Single Base Substitution T-A INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN2596-S.SNP.9:4184289 chr09:004184289 0 W/4184289-4184289 FN2596-S SNP C -> T AC=2;AN=198;BQB=0.998868;DP=4830;DP4=2344,2225,28,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00351967;MQB=1.75885e-21;MQSB=0.132723;RPB=0.992786;SGB=205.783;VDB=0.392737;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.9:4185710 chr09:004185710 0 W/4185710-4185710 FN735-S Single Base Substitution G-A INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN1116-S.SNP.9:4188248 chr09:004188248 0 W/4188248-4188248 FN1116-S Single Base Substitution A-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN-71.SNP.9:4199948 chr09:004199948 0 W/4199948-4199948 FN-71 Single Base Substitution G-C INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-193.SNP.9:4200965 chr09:004200965 0 W/4200965-4200965 FN-193 Single Base Substitution A-T INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1212-S.SNP.9:4206769 chr09:004206769 0 W/4206769-4206769 FN1212-S Single Base Substitution C-T INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1458-S.SNP.9:4209820 chr09:004209820 0 W/4209820-4209820 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2729-S.SNP.9:4214406 chr09:004214406 0 W/4214406-4214406 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.76869;DP=4687;DP4=2109,2374,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47577e-10;MQSB=0.982092;RPB=0.989288;SGB=54.6902;VDB=0.72439;EFF=INTERGENIC(MODIFIER||||||||||1) FN-281.SNP.9:4229133 chr09:004229133 0 W/4229133-4229133 FN-281 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g08160 plant protein of unknown function domain containing protein, expressed SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1349-S.SNP.9:4233020 chr09:004233020 0 W/4233020-4233020 FN1349-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN701-S.SNP.9:4236149 chr09:004236149 0 W/4236149-4236149 FN701-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN701-S.SNP.9:4236150 chr09:004236150 0 W/4236150-4236150 FN701-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN701-S.SNP.9:4236152 chr09:004236152 0 W/4236152-4236152 FN701-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3825-S.SNP.9:4236692 chr09:004236692 0 W/4236692-4236692 FN3825-S SNP G -> A AC=1;AN=190;BQB=0.904633;DP=2897;DP4=1300,1496,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00318e-06;MQSB=0.986502;RPB=0.995606;SGB=39.9877;VDB=0.491369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R2045C|2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|8|1) FN-269.SNP.9:4236758 chr09:004236758 0 W/4236758-4236758 FN-269 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-54.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN-54 Single Base Substitution C-T INTRON HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2198-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN2198-S SNP C -> T AC=1;AN=190;BQB=0.831884;DP=3644;DP4=1703,1502,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000548847;MQB=2.22115e-07;MQSB=0.998927;RPB=0.567171;SGB=50.3161;VDB=0.491596;EFF=INTRON(MODIFIER||||2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|7|1) FN3467-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN3467-S SNP C -> T AC=1;AN=184;BQB=0.640176;DP=3065;DP4=1484,1464,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16745e-08;MQSB=0.782719;RPB=0.868509;SGB=89.4385;VDB=0.107466;EFF=INTRON(MODIFIER||||2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|7|1) FN3732-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN3732-S SNP C -> T AC=1;AN=190;BQB=0.999659;DP=2370;DP4=1101,1158,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.60206e-06;MQSB=0.971391;RPB=0.995377;SGB=39.9877;VDB=0.878682;EFF=INTRON(MODIFIER||||2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|7|1) FN3947-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN3947-S SNP C -> T AC=2;AN=168;BQB=0.178953;DP=2428;DP4=1147,1126,18,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.52521e-11;MQSB=0.978843;RPB=0.937831;SGB=154.082;VDB=0.956765;EFF=INTRON(MODIFIER||||2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|7|1) FN763-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN763-S Single Base Substitution C-T INTRON HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN931-S.SNP.9:4237917 chr09:004237917 0 W/4237917-4237917 FN931-S Single Base Substitution C-T INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN1568-S.SNP.9:4239018 chr09:004239018 0 W/4239018-4239018 FN1568-S Single Base Substitution G-A INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1270-S.SNP.9:4241381 chr09:004241381 0 W/4241381-4241381 FN1270-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN4020-S.SNP.9:4243426 chr09:004243426 0 W/4243426-4243426 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.968836;DP=3051;DP4=1675,1269,17,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.89079e-16;MQSB=0.849012;RPB=0.297436;SGB=99.9335;VDB=0.324721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A597T|2225|LOC_Os09g08180|protein_coding|CODING|LOC_Os09g08180.1|3|1) FN996-S.SNP.9:4250877 chr09:004250877 0 W/4250877-4250877 FN996-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN850-S.SNP.9:4252383 chr09:004252383 0 W/4252383-4252383 FN850-S Single Base Substitution C-G INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN2690-S.SNP.9:4260660 chr09:004260660 0 W/4260660-4260660 FN2690-S SNP C -> A AC=2;AN=200;BQB=0.604275;DP=4395;DP4=2230,1886,16,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.87707e-13;MQSB=0.768801;RPB=0.484817;SGB=87.1368;VDB=0.355172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.9:4261660 chr09:004261660 0 W/4261660-4261660 FN2440 SNP C -> A AC=1;AN=200;BQB=0.660658;DP=7544;DP4=3230,3921,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.205e-09;MQSB=0.176827;RPB=0.992163;SGB=51.0851;VDB=0.858675;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.9:4264191 chr09:004264191 0 W/4264191-4264191 FN3860-S SNP C -> T AC=1;AN=158;BQB=0.977028;DP=2609;DP4=1302,1201,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.18502e-12;MQSB=0.953806;RPB=0.94937;SGB=90.7616;VDB=0.694862;EFF=INTRON(MODIFIER||||1532|LOC_Os09g08224|protein_coding|CODING|LOC_Os09g08224.1|3|1) FN2213-S.SNP.9:4265638 chr09:004265638 0 W/4265638-4265638 FN2213-S SNP G -> T AC=1;AN=190;BQB=0.452118;DP=4580;DP4=2157,2101,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23997e-13;MQSB=0.853022;RPB=0.25645;SGB=94.6341;VDB=0.0128453;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G991W|1532|LOC_Os09g08224|protein_coding|CODING|LOC_Os09g08224.1|6|1) FN-193.SNP.9:4265706 chr09:004265706 0 W/4265706-4265706 FN-193 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2789-S.SNP.9:4271358 chr09:004271358 0 W/4271358-4271358 FN2789-S SNP C -> G AC=2;AN=198;BQB=0.262288;DP=4037;DP4=1856,1928,20,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.29984e-24;MQSB=0.990749;RPB=0.850739;SGB=91.6272;VDB=0.473645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.9:4274137 chr09:004274137 0 W/4274137-4274137 FN3941-S SNP C -> G AC=2;AN=168;BQB=0.799589;DP=2456;DP4=1168,1170,14,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.29963e-11;MQSB=0.968806;RPB=0.601291;SGB=78.7577;VDB=0.737364;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V159|310|LOC_Os09g08254|protein_coding|CODING|LOC_Os09g08254.1|2|1) FN2352.SNP.9:4277687 chr09:004277687 0 W/4277687-4277687 FN2352 SNP G -> A AC=1;AN=192;BQB=0.0170299;DP=5062;DP4=2043,2428,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.55434e-07;MQSB=0.992891;RPB=0.138666;SGB=-14.2043;VDB=0.582251;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D16|95|LOC_Os09g08280|protein_coding|CODING|LOC_Os09g08280.1|1|1) FN1300-S.SNP.9:4279967 chr09:004279967 0 W/4279967-4279967 FN1300-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN266-S.SNP.9:4280268 chr09:004280268 0 W/4280268-4280268 FN266-S Single Base Substitution T-C INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3556-S.SNP.9:4280342 chr09:004280342 0 W/4280342-4280342 FN3556-S SNP A -> C AC=1;AN=188;BQB=0.864897;DP=3225;DP4=1534,1569,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.20321e-08;MQSB=0.737614;RPB=0.83244;SGB=43.0708;VDB=0.562629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.9:4285455 chr09:004285455 0 W/4285455-4285455 FN3860-S SNP T -> C AC=1;AN=158;BQB=0.908579;DP=2545;DP4=1104,1294,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.89225e-11;MQSB=0.998109;RPB=0.79736;SGB=26.1881;VDB=0.70426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.9:4287174 chr09:004287174 0 W/4287174-4287174 FN3966-S SNP G -> T AC=2;AN=168;BQB=0.812434;DP=2303;DP4=970,1232,16,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.92516e-16;MQSB=0.934441;RPB=0.957553;SGB=99.9335;VDB=0.62532;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I141|233|LOC_Os09g08290|protein_coding|CODING|LOC_Os09g08290.1|3|1) FN548-S.SNP.9:4288697 chr09:004288697 0 W/4288697-4288697 FN548-S Single Base Substitution C-T INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-56.SNP.9:4291148 chr09:004291148 0 W/4291148-4291148 FN-56 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN901-S.SNP.9:4296779 chr09:004296779 0 W/4296779-4296779 FN901-S Single Base Substitution T-C INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3675-S.SNP.9:4299000 chr09:004299000 0 W/4299000-4299000 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.996902;DP=2873;DP4=1494,1286,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.77e-09;MQSB=0.938179;RPB=0.9777;SGB=71.8647;VDB=0.927247;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.9:4302533 chr09:004302533 0 W/4302533-4302533 FN351-S Single Base Substitution T-A INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2597-S.SNP.9:4307625 chr09:004307625 0 W/4307625-4307625 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.590776;DP=3325;DP4=1275,1513,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.46298e-06;MQSB=0.665895;RPB=0.771231;SGB=-14.4309;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN4182-S.SNP.9:4310156 chr09:004310156 0 W/4310156-4310156 FN4182-S SNP G -> A AC=2;AN=170;BQB=0.997438;DP=2822;DP4=1232,1494,16,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.50544e-17;MQSB=0.802483;RPB=0.915359;SGB=127.84;VDB=0.718539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.9:4315916 chr09:004315916 0 W/4315916-4315916 FN3711-S SNP A -> C AC=1;AN=190;BQB=0.922221;DP=2577;DP4=1136,1364,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03965e-06;MQSB=0.983947;RPB=0.850517;SGB=35.4339;VDB=0.0522394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.9:4317486 chr09:004317486 0 W/4317486-4317486 FN1067-S Single Base Substitution C-G INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN3416-S.SNP.9:4321076 chr09:004321076 0 W/4321076-4321076 FN3416-S SNP T -> C AC=1;AN=184;BQB=0.999985;DP=2820;DP4=1225,1437,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.41305e-08;MQSB=0.939164;RPB=0.428225;SGB=35.7479;VDB=0.936448;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I166T|381|LOC_Os09g08350|protein_coding|CODING|LOC_Os09g08350.1|3|1) FN4104-S.SNP.9:4323814 chr09:004323814 0 W/4323814-4323814 FN4104-S SNP C -> T AC=1;AN=182;BQB=0.813932;DP=2697;DP4=1340,1269,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.14607e-11;MQSB=0.975806;RPB=0.818024;SGB=71.1765;VDB=0.208523;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.9:4323819 chr09:004323819 0 W/4323819-4323819 FN4104-S SNP C -> T AC=1;AN=182;BQB=0.962843;DP=2708;DP4=1372,1274,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.61838e-11;MQSB=0.992188;RPB=0.87404;SGB=46.1603;VDB=0.101125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.9:4332497 chr09:004332497 0 W/4332497-4332497 FN3916-S SNP G -> T AC=1;AN=158;BQB=0.946601;DP=2516;DP4=1233,1210,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.6778e-08;MQSB=0.980957;RPB=0.488635;SGB=30.704;VDB=0.82322;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.9:4334476 chr09:004334476 0 W/4334476-4334476 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN549-S.SNP.9:4337393 chr09:004337393 0 W/4337393-4337393 FN549-S Single Base Substitution G-C INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2174-S.SNP.9:4339880 chr09:004339880 0 W/4339880-4339880 FN2174-S SNP G -> T AC=2;AN=168;BQB=0.387248;DP=1400;DP4=777,558,8,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.42831e-05;MQSB=0.999697;RPB=0.896479;SGB=-0.101747;VDB=0.923771;EFF=INTRON(MODIFIER||||369|LOC_Os09g08370|protein_coding|CODING|LOC_Os09g08370.1|4|1),INTRON(MODIFIER||||369|LOC_Os09g08370|protein_coding|CODING|LOC_Os09g08370.2|4|1),INTRON(MODIFIER||||369|LOC_Os09g08370|protein_coding|CODING|LOC_Os09g08370.3|3|1) FN_935-1.SNP.9:4342344 chr09:004342344 0 W/4342344-4342344 FN_935-1 Single Base Substitution G-A HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN411-S.SNP.9:4346644 chr09:004346644 0 W/4346644-4346644 FN411-S Single Base Substitution C-G INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN3343-S.SNP.9:4349260 chr09:004349260 0 W/4349260-4349260 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.958211;DP=2774;DP4=1412,1241,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98172e-05;MQSB=0.824004;RPB=0.476237;SGB=30.6558;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.9:4364468 chr09:004364468 0 W/4364468-4364468 FN2432 SNP C -> T AC=1;AN=200;BQB=0.614176;DP=4660;DP4=2313,2085,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.1904e-12;MQSB=0.81149;RPB=0.105461;SGB=77.2904;VDB=0.0469615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.9:4364472 chr09:004364472 0 W/4364472-4364472 FN2432 SNP C -> T AC=1;AN=200;BQB=0.704795;DP=4651;DP4=2308,2069,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.48259e-13;MQSB=0.819887;RPB=0.117193;SGB=37.3004;VDB=0.108094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.9:4364473 chr09:004364473 0 W/4364473-4364473 FN2432 SNP C -> T AC=1;AN=200;BQB=0.277593;DP=4655;DP4=2302,2055,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12025e-12;MQSB=0.784867;RPB=0.0312138;SGB=58.2954;VDB=0.0319615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.9:4369231 chr09:004369231 0 W/4369231-4369231 FN4041-S SNP A -> C AC=1;AN=168;BQB=0.876701;DP=2472;DP4=1236,1133,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000165245;MQSB=0.999733;RPB=0.887702;SGB=24.4556;VDB=0.340495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.9:4370061 chr09:004370061 0 W/4370061-4370061 FN2172-S SNP A -> G AC=1;AN=168;BQB=0.954756;DP=3875;DP4=1783,2056,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.87112e-12;MQSB=0.970268;RPB=0.999991;SGB=12.7756;VDB=0.931524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.9:4371345 chr09:004371345 0 W/4371345-4371345 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.647856;DP=5048;DP4=2619,2166,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.18481e-07;MQSB=0.964424;RPB=0.460117;SGB=13.8539;VDB=0.0358442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.9:4372030 chr09:004372030 0 W/4372030-4372030 FN2707-S SNP A -> T AC=2;AN=200;BQB=0.963385;DP=4686;DP4=2210,2245,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.35025e-17;MQSB=0.9384;RPB=0.996907;SGB=60.747;VDB=0.242364;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.9:4373726 chr09:004373726 0 W/4373726-4373726 FN4075-S SNP A -> G AC=1;AN=182;BQB=0.614902;DP=2834;DP4=1082,1605,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.82676e-07;MQSB=0.0398047;RPB=0.445711;SGB=62.1548;VDB=0.252585;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.9:4374654 chr09:004374654 0 W/4374654-4374654 FN537-S Single Base Substitution A-T INTERGENIC HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN2530-S.SNP.9:4375595 chr09:004375595 0 W/4375595-4375595 FN2530-S SNP C -> A AC=2;AN=198;BQB=0.0773864;DP=4613;DP4=2186,2201,20,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.61218e-21;MQSB=0.887985;RPB=0.711736;SGB=94.2223;VDB=0.917485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2086-S.SNP.9:4377603 chr09:004377603 0 W/4377603-4377603 FN2086-S SNP A -> G AC=1;AN=168;BQB=0.0480979;DP=4125;DP4=2217,1863,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.13964e-13;MQSB=0.989567;RPB=0.956218;SGB=53.7853;VDB=0.210442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.9:4383873 chr09:004383873 0 W/4383873-4383873 FN1272-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g08420 AGC_PVPK_like_kin82y.15 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN485-S.SNP.9:4387506 chr09:004387506 0 W/4387506-4387506 FN485-S Single Base Substitution A-T INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN435-S.SNP.9:4394288 chr09:004394288 0 W/4394288-4394288 FN435-S Single Base Substitution T-C INTERGENIC HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN-231.SNP.9:4399123 chr09:004399123 0 W/4399123-4399123 FN-231 Single Base Substitution C-T INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1703-S.SNP.9:4413723 chr09:004413723 0 W/4413723-4413723 FN1703-S SNP T -> A AC=1;AN=188;BQB=0.979783;DP=3992;DP4=1992,1971,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0140281;MQB=0.000778691;MQSB=0.000112672;RPB=0.690904;SGB=28.6195;VDB=0.910077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q493H|915|LOC_Os09g08460|protein_coding|CODING|LOC_Os09g08460.1|6|1) FN2291.SNP.9:4414342 chr09:004414342 0 W/4414342-4414342 FN2291 SNP T -> A AC=1;AN=192;BQB=0.197471;DP=5046;DP4=2557,2221,21,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00059453;MQB=5.08653e-21;MQSB=0.37001;RPB=0.644706;SGB=95.587;VDB=0.561063;EFF=INTRON(MODIFIER||||915|LOC_Os09g08460|protein_coding|CODING|LOC_Os09g08460.1|5|1) FN2476.SNP.9:4415486 chr09:004415486 0 W/4415486-4415486 FN2476 SNP T -> C AC=1;AN=200;BQB=0.842817;DP=5141;DP4=2517,2306,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000583544;MQB=5.05645e-07;MQSB=0.815903;RPB=0.977934;SGB=36.6644;VDB=0.375587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T107A|915|LOC_Os09g08460|protein_coding|CODING|LOC_Os09g08460.1|3|1) FN4179-S.SNP.9:4429296 chr09:004429296 0 W/4429296-4429296 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.882277;DP=2615;DP4=1198,1331,6,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.7122e-11;MQSB=0.987716;RPB=0.185647;SGB=78.9707;VDB=0.021046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.9:4442952 chr09:004442952 0 W/4442952-4442952 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.902361;DP=3760;DP4=1425,2032,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.50645e-05;MQSB=0.000116654;RPB=0.61047;SGB=-0.221308;VDB=0.79958;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.9:4444468 chr09:004444468 0 W/4444468-4444468 FN1113-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08520 expressed protein SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN803-S.SNP.9:4472255 chr09:004472255 0 W/4472255-4472255 FN803-S Single Base Substitution G-A INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN-379.SNP.9:4474755 chr09:004474755 0 W/4474755-4474755 FN-379 Single Base Substitution T-C INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1737-S.SNP.9:4477862 chr09:004477862 0 W/4477862-4477862 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.356653;DP=2070;DP4=656,1369,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000204145;MQSB=0.879989;RPB=0.8131;SGB=18.4463;VDB=0.987183;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.9:4481324 chr09:004481324 0 W/4481324-4481324 FN1337-S Single Base Substitution A-T INTRON HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3830-S.SNP.9:4495479 chr09:004495479 0 W/4495479-4495479 FN3830-S SNP T -> A AC=1;AN=190;BQB=0.734618;DP=2420;DP4=1169,1190,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.11494e-07;MQSB=0.999846;RPB=0.993044;SGB=46.7622;VDB=0.177128;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.9:4500569 chr09:004500569 0 W/4500569-4500569 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.992553;DP=1385;DP4=765,501,11,7;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0101083;MQB=0.078791;MQSB=0;RPB=0.959091;SGB=75.8731;VDB=0.8629;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.9:4500569 chr09:004500569 0 W/4500569-4500569 FN4137-S SNP C -> T AC=2;AN=170;BQB=0.962654;DP=1077;DP4=635,366,9,2;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0120706;MQB=0.314225;MQSB=8.82818e-44;RPB=0.998518;SGB=27.9928;VDB=0.382943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.9:4502118 chr09:004502118 0 W/4502118-4502118 FN2708-S SNP T -> C AC=1;AN=200;BQB=0.0462966;DP=5045;DP4=2101,2483,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41792e-10;MQSB=0.991048;RPB=0.821218;SGB=-38.4742;VDB=0.74575;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:4508869 chr09:004508869 0 W/4508869-4508869 FN1097-S Single Base Substitution G-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-342.SNP.9:4509515 chr09:004509515 0 W/4509515-4509515 FN-342 Single Base Substitution C-T INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2784-S.SNP.9:4515816 chr09:004515816 0 W/4515816-4515816 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.695677;DP=4064;DP4=2275,1578,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.124754;MQB=0.995946;MQSB=1.72208e-24;RPB=0.933225;SGB=94.0758;VDB=0.536128;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R816|1082|LOC_Os09g08630|protein_coding|CODING|LOC_Os09g08630.1|2|1) FN1423-S.SNP.9:4517496 chr09:004517496 0 W/4517496-4517496 FN1423-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g08640 retrotransposon protein, putative, unclassified, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN737-S.SNP.9:4521643 chr09:004521643 0 W/4521643-4521643 FN737-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g08640 retrotransposon protein, putative, unclassified, expressed SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN3980-S.SNP.9:4522599 chr09:004522599 0 W/4522599-4522599 FN3980-S SNP G -> A AC=1;AN=168;BQB=0.99728;DP=2853;DP4=1483,1289,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.119523;MQB=0.662557;MQSB=2.42071e-09;RPB=0.607048;SGB=34.748;VDB=0.704797;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D269|1995|LOC_Os09g08640|protein_coding|CODING|LOC_Os09g08640.1|1|1) FN229-S.SNP.9:4526292 chr09:004526292 0 W/4526292-4526292 FN229-S Single Base Substitution C-G INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN3941-S.SNP.9:4526331 chr09:004526331 0 W/4526331-4526331 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.970598;DP=2772;DP4=1359,1297,6,14;HOB=0.0235261;ICB=0.494119;MQ=36;MQ0F=0.0595238;MQB=0.788205;MQSB=7.14241e-06;RPB=0.5537;SGB=34.3388;VDB=0.307122;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.9:4529868 chr09:004529868 0 W/4529868-4529868 W577-3-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g08650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN3553-S.SNP.9:4533626 chr09:004533626 0 W/4533626-4533626 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.900188;DP=3146;DP4=1730,1312,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.80498e-08;MQSB=0.999222;RPB=0.839866;SGB=15.903;VDB=0.895162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.9:4533826 chr09:004533826 0 W/4533826-4533826 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.131879;DP=5373;DP4=2466,2696,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.0625e-12;MQSB=0.996955;RPB=0.736998;SGB=47.7211;VDB=0.275714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.9:4543785 chr09:004543785 0 W/4543785-4543785 FN1651-S Single Base Substitution G-T INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN3512-S.SNP.9:4546861 chr09:004546861 0 W/4546861-4546861 FN3512-S SNP G -> A AC=1;AN=188;BQB=0.860712;DP=3057;DP4=1414,1558,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.33091e-08;MQSB=0.968256;RPB=0.965088;SGB=67.1521;VDB=0.212649;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.9:4571266 chr09:004571266 0 W/4571266-4571266 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.962068;DP=3249;DP4=1615,1576,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.09006e-05;MQSB=0.987032;RPB=0.904416;SGB=39.6007;VDB=0.294276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.9:4571837 chr09:004571837 0 W/4571837-4571837 FN2430 SNP C -> A AC=1;AN=200;BQB=0.994413;DP=4007;DP4=1617,2152,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.52438e-11;MQSB=0.737313;RPB=0.719218;SGB=86.5007;VDB=0.763358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L112M|347|LOC_Os09g08700|protein_coding|CODING|LOC_Os09g08700.1|1|1) FN2563-S.SNP.9:4600868 chr09:004600868 0 W/4600868-4600868 FN2563-S SNP C -> T AC=2;AN=198;BQB=0.47122;DP=2791;DP4=1809,838,13,4;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.5493e-09;MQSB=0.935645;RPB=0.627676;SGB=72.5245;VDB=0.38058;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.9:4604877 chr09:004604877 0 W/4604877-4604877 FN266-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g08730 pumilio domain-containing protein, putative, expressed SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-81.SNP.9:4609851 chr09:004609851 0 W/4609851-4609851 FN-81 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1647-S.SNP.9:4616791 chr09:004616791 0 W/4616791-4616791 FN1647-S Single Base Substitution A-T INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2611-S.SNP.9:4618902 chr09:004618902 0 W/4618902-4618902 FN2611-S SNP C -> A AC=1;AN=200;BQB=0.762799;DP=5279;DP4=2660,2250,34,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.28038e-32;MQSB=0.0877525;RPB=0.919039;SGB=138.902;VDB=0.318525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.9:4620388 chr09:004620388 0 W/4620388-4620388 FN2562-S SNP T -> A AC=1;AN=198;BQB=0.519875;DP=4817;DP4=2396,2209,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0618642;MQB=0.00579882;MQSB=0.533682;RPB=0.923441;SGB=94.0758;VDB=0.386413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-10.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN-10 Single Base Substitution A-G INTERGENIC Homo SNo: 10, Mutant_ID: FN-10, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1114-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN1114-S Single Base Substitution A-G INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2140-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN2140-S SNP A -> G AC=1;AN=168;BQB=0.982546;DP=1963;DP4=911,1002,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0315843;MQB=0.787813;MQSB=0.664552;RPB=0.553099;SGB=-38.9357;VDB=0.71227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN2496 SNP A -> G AC=1;AN=200;BQB=0.2511;DP=4583;DP4=2120,1832,7,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0250927;MQB=0.509802;MQSB=2.35288e-16;RPB=0.996242;SGB=77.2904;VDB=0.0166018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN2666-S SNP A -> G AC=1;AN=200;BQB=0.856805;DP=4824;DP4=2436,2022,12,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0250829;MQB=0.0423556;MQSB=1.8524e-08;RPB=0.6403;SGB=45.1159;VDB=0.200365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN2788-S SNP A -> G AC=2;AN=198;BQB=0.294561;DP=3948;DP4=1842,1739,27,13;HOB=0.019998;ICB=0.495001;MQ=38;MQ0F=0.0245694;MQB=0.00493292;MQSB=5.74088e-10;RPB=0.503031;SGB=178.212;VDB=0.404004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN3921-S SNP A -> G AC=2;AN=158;BQB=0.998044;DP=2990;DP4=1370,1446,15,22;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.00702341;MQB=0.00445679;MQSB=0.591914;RPB=0.654675;SGB=114.94;VDB=0.274539;EFF=INTERGENIC(MODIFIER||||||||||1) FN549-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN549-S Single Base Substitution A-G INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN920-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN920-S Single Base Substitution A-G INTERGENIC HOMO SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN997-S.SNP.9:4621560 chr09:004621560 0 W/4621560-4621560 FN997-S Single Base Substitution A-G INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN568-S.SNP.9:4623164 chr09:004623164 0 W/4623164-4623164 FN568-S Single Base Substitution G-C INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1490-S.SNP.9:4623768 chr09:004623768 0 W/4623768-4623768 FN1490-S Single Base Substitution A-C INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2162-S.SNP.9:4625022 chr09:004625022 0 W/4625022-4625022 FN2162-S SNP G -> A AC=1;AN=168;BQB=0.000109789;DP=3887;DP4=1698,2151,6,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.69307e-06;MQSB=0.990789;RPB=0.367916;SGB=-122.918;VDB=0.957952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.9:4628579 chr09:004628579 0 W/4628579-4628579 FN2375 SNP G -> A AC=1;AN=192;BQB=0.132188;DP=4790;DP4=2463,2086,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.21525e-09;MQSB=0.592685;RPB=0.702434;SGB=10.4835;VDB=0.584266;EFF=INTRON(MODIFIER||||206|LOC_Os09g08770|protein_coding|CODING|LOC_Os09g08770.1|2|1) FN4133-S.SNP.9:4628983 chr09:004628983 0 W/4628983-4628983 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.95033;DP=2991;DP4=1311,1596,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.72265e-08;MQSB=0.999998;RPB=0.980178;SGB=48.6223;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1719-S.SNP.9:4629123 chr09:004629123 0 W/4629123-4629123 FN1719-S SNP C -> A AC=1;AN=188;BQB=0.0648916;DP=1894;DP4=695,1155,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.06837e-05;MQSB=0.938097;RPB=0.919083;SGB=-16.6296;VDB=0.0995058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.9:4633128 chr09:004633128 0 W/4633128-4633128 FN2194-S SNP C -> T AC=2;AN=190;BQB=0.913541;DP=4610;DP4=2221,2037,22,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000433839;MQB=2.00475e-27;MQSB=0.653243;RPB=0.960227;SGB=123.261;VDB=0.76109;EFF=INTRON(MODIFIER||||729|LOC_Os09g08780|protein_coding|CODING|LOC_Os09g08780.1|2|1) FN_N1-116-1.SNP.9:4633375 chr09:004633375 0 W/4633375-4633375 FN_N1-116-1 Single Base Substitution T-A HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2637-S.SNP.9:4633442 chr09:004633442 0 W/4633442-4633442 FN2637-S SNP A -> G AC=1;AN=200;BQB=0.364321;DP=4948;DP4=2373,2371,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00222312;MQB=1.10455e-13;MQSB=0.830753;RPB=0.868868;SGB=52.9314;VDB=0.123593;EFF=INTRON(MODIFIER||||729|LOC_Os09g08780|protein_coding|CODING|LOC_Os09g08780.1|2|1) FN993-S.SNP.9:4633837 chr09:004633837 0 W/4633837-4633837 FN993-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g08780 transposon protein, putative, CACTA, En/Spm sub-class SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN3840-S.SNP.9:4634170 chr09:004634170 0 W/4634170-4634170 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.989578;DP=2897;DP4=1439,1351,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21146e-05;MQSB=0.401825;RPB=0.313829;SGB=44.5415;VDB=0.816179;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T537|729|LOC_Os09g08780|protein_coding|CODING|LOC_Os09g08780.1|4|1) FN424-S.SNP.9:4635219 chr09:004635219 0 W/4635219-4635219 FN424-S Single Base Substitution C-T INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN4139-S.SNP.9:4639493 chr09:004639493 0 W/4639493-4639493 FN4139-S SNP T -> A AC=1;AN=170;BQB=0.959509;DP=2747;DP4=1420,1238,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0447761;MQB=0.0169396;MQSB=0.973546;RPB=0.966467;SGB=61.2001;VDB=0.596238;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G858|930|LOC_Os09g08790|protein_coding|CODING|LOC_Os09g08790.1|6|1) FN774-S.SNP.9:4643313 chr09:004643313 0 W/4643313-4643313 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3838-S.SNP.9:4645796 chr09:004645796 0 W/4645796-4645796 FN3838-S SNP C -> T AC=2;AN=190;BQB=0.977776;DP=2665;DP4=1355,1178,16,5;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00262664;MQB=5.0221e-12;MQSB=0.900087;RPB=0.621102;SGB=90.0802;VDB=0.792852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.9:4645797 chr09:004645797 0 W/4645797-4645797 FN3838-S SNP C -> G AC=2;AN=190;BQB=0.981483;DP=2680;DP4=1359,1189,16,5;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00261194;MQB=7.47818e-11;MQSB=0.928065;RPB=0.634677;SGB=90.0802;VDB=0.67531;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.9:4648015 chr09:004648015 0 W/4648015-4648015 FN835-S Single Base Substitution C-G INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-193.SNP.9:4648558 chr09:004648558 0 W/4648558-4648558 FN-193 Single Base Substitution T-C INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1043-S.SNP.9:4651459 chr09:004651459 0 W/4651459-4651459 FN1043-S Single Base Substitution C-T INTRON HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1550-S.SNP.9:4651459 chr09:004651459 0 W/4651459-4651459 FN1550-S Single Base Substitution C-T INTRON Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN832-S.SNP.9:4651459 chr09:004651459 0 W/4651459-4651459 FN832-S Single Base Substitution C-T INTRON HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. 707-6.SNP.9:4651766 chr09:004651766 0 W/4651766-4651766 707-6 Single Base Substitution C-A INTRON Homo SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. FN2105-S.SNP.9:4659198 chr09:004659198 0 W/4659198-4659198 FN2105-S SNP C -> T AC=2;AN=168;BQB=0.254101;DP=2432;DP4=576,1785,2,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000411184;MQB=7.71134e-12;MQSB=0.965046;RPB=0.979162;SGB=-10.6335;VDB=0.743211;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.9:4670224 chr09:004670224 0 W/4670224-4670224 FN4255-S SNP A -> G AC=1;AN=170;BQB=0.816759;DP=2753;DP4=1370,1288,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.7359e-10;MQSB=0.997579;RPB=0.999168;SGB=32.0972;VDB=0.224432;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A405|628|LOC_Os09g08850|protein_coding|CODING|LOC_Os09g08850.1|4|1) FN2779-S.SNP.9:4670691 chr09:004670691 0 W/4670691-4670691 FN2779-S SNP T -> A AC=1;AN=198;BQB=0.777867;DP=3946;DP4=1863,1818,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.84861e-15;MQSB=0.988304;RPB=0.999998;SGB=60.4858;VDB=0.508484;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|L561Q|628|LOC_Os09g08850|protein_coding|CODING|LOC_Os09g08850.1|4|1) FN1015-S.SNP.9:4680415 chr09:004680415 0 W/4680415-4680415 FN1015-S Single Base Substitution G-T INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN4017-S.SNP.9:4683981 chr09:004683981 0 W/4683981-4683981 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.993737;DP=2667;DP4=1307,1228,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00262467;MQB=2.0356e-09;MQSB=0.958679;RPB=0.819132;SGB=39.2004;VDB=0.605821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P744L|833|LOC_Os09g08860|protein_coding|CODING|LOC_Os09g08860.1|6|1) FN2313.SNP.9:4719572 chr09:004719572 0 W/4719572-4719572 FN2313 SNP T -> C AC=1;AN=192;BQB=0.74446;DP=5447;DP4=2682,2304,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.116945;MQB=0.502971;MQSB=0;RPB=0.306937;SGB=21.4339;VDB=0.430095;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W1375R|1777|LOC_Os09g08900|protein_coding|CODING|LOC_Os09g08900.1|3|1) FN3740-S.SNP.9:4734544 chr09:004734544 0 W/4734544-4734544 FN3740-S SNP C -> T AC=2;AN=190;BQB=0.920086;DP=2254;DP4=1027,1095,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14199e-11;MQSB=0.443399;RPB=0.119758;SGB=103.742;VDB=0.479135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.9:4740882 chr09:004740882 0 W/4740882-4740882 FN2683-S SNP T -> G AC=1;AN=200;BQB=0.762699;DP=4992;DP4=2269,2487,15,11;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00120192;MQB=1.7448e-05;MQSB=0;RPB=0.672012;SGB=52.9314;VDB=0.0632872;EFF=INTERGENIC(MODIFIER||||||||||1) FN743-S.SNP.9:4742862 chr09:004742862 0 W/4742862-4742862 FN743-S Single Base Substitution T-C INTERGENIC HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN1697-S.SNP.9:4743356 chr09:004743356 0 W/4743356-4743356 FN1697-S SNP T -> G AC=1;AN=188;BQB=0.0139954;DP=2786;DP4=1288,1432,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4486e-05;MQSB=0.890947;RPB=0.987581;SGB=-13.9132;VDB=0.660997;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.9:4743700 chr09:004743700 0 W/4743700-4743700 FN_769-4-1 Single Base Substitution T-A HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2164-S.SNP.9:4747207 chr09:004747207 0 W/4747207-4747207 FN2164-S SNP C -> G AC=2;AN=168;BQB=0.441286;DP=2358;DP4=1192,1113,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.24388e-09;MQSB=0.0264365;RPB=0.268951;SGB=41.6313;VDB=0.275419;EFF=INTERGENIC(MODIFIER||||||||||1) FN-19.SNP.9:4762520 chr09:004762520 0 W/4762520-4762520 FN-19 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN888-S.SNP.9:4763486 chr09:004763486 0 W/4763486-4763486 FN888-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g08960 retrotransposon protein, putative, unclassified, expressed SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2313.SNP.9:4763532 chr09:004763532 0 W/4763532-4763532 FN2313 SNP G -> A AC=1;AN=192;BQB=0.990358;DP=4598;DP4=2211,2119,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.4439e-14;MQSB=0.905988;RPB=0.849547;SGB=82.5522;VDB=0.911687;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q240|655|LOC_Os09g08960|protein_coding|CODING|LOC_Os09g08960.1|4|1) FN3818-S.SNP.9:4763761 chr09:004763761 0 W/4763761-4763761 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.957222;DP=2758;DP4=1509,1157,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17588e-06;MQSB=0.926183;RPB=0.980421;SGB=35.4339;VDB=0.650146;EFF=INTRON(MODIFIER||||655|LOC_Os09g08960|protein_coding|CODING|LOC_Os09g08960.1|4|1) FN2218-S.SNP.9:4770574 chr09:004770574 0 W/4770574-4770574 FN2218-S SNP A -> G AC=2;AN=190;BQB=0.690266;DP=4756;DP4=2412,1962,29,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.59521e-29;MQSB=0.994149;RPB=0.948504;SGB=120.707;VDB=0.190222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.9:4772039 chr09:004772039 0 W/4772039-4772039 FN3997-S SNP G -> C AC=1;AN=168;BQB=0.915237;DP=2894;DP4=1648,1144,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.15292e-07;MQSB=0.568358;RPB=0.788655;SGB=43.3113;VDB=0.659762;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.9:4772039 chr09:004772039 0 W/4772039-4772039 FN467-S Single Base Substitution G-C INTERGENIC HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.9:4772039 chr09:004772039 0 W/4772039-4772039 FN871-S Single Base Substitution G-C INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. W22-2-1.SNP.9:4785365 chr09:004785365 0 W/4785365-4785365 W22-2-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g09000 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3484-S.SNP.9:4786610 chr09:004786610 0 W/4786610-4786610 FN3484-S SNP A -> T AC=1;AN=184;BQB=0.953873;DP=2855;DP4=1524,1151,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.49179e-10;MQSB=0.0914919;RPB=0.996878;SGB=38.4058;VDB=0.651153;EFF=INTRON(MODIFIER||||2673|LOC_Os09g09000|protein_coding|CODING|LOC_Os09g09000.1|10|1) FN2134-S.SNP.9:4787324 chr09:004787324 0 W/4787324-4787324 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.653841;DP=1230;DP4=931,218,12,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19327e-07;MQSB=0.320909;RPB=0.989728;SGB=56.6036;VDB=0.183899;EFF=INTRON(MODIFIER||||2673|LOC_Os09g09000|protein_coding|CODING|LOC_Os09g09000.1|10|1) FN584-S.SNP.9:4790739 chr09:004790739 0 W/4790739-4790739 FN584-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g09000 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3466-S.SNP.9:4790858 chr09:004790858 0 W/4790858-4790858 FN3466-S SNP C -> G AC=1;AN=184;BQB=0.904322;DP=3729;DP4=1666,1977,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.244033;MQB=0.300989;MQSB=6.00077e-10;RPB=0.71616;SGB=56.8786;VDB=0.974357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G1066A|2673|LOC_Os09g09000|protein_coding|CODING|LOC_Os09g09000.1|8|1) FN2242-S.SNP.9:4802917 chr09:004802917 0 W/4802917-4802917 FN2242-S SNP C -> A AC=1;AN=190;BQB=0.971579;DP=2224;DP4=973,959,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.241906;MQB=0.821929;MQSB=1.76962e-23;RPB=0.437519;SGB=15.9981;VDB=0.484415;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.9:4812695 chr09:004812695 0 W/4812695-4812695 FN620-S Single Base Substitution G-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. W466-5-1.SNP.9:4823527 chr09:004823527 0 W/4823527-4823527 W466-5-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3639-S.SNP.9:4825029 chr09:004825029 0 W/4825029-4825029 FN3639-S SNP A -> G AC=2;AN=190;BQB=0.825581;DP=3156;DP4=1443,1516,20,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000316857;MQB=2.5838e-18;MQSB=0.302755;RPB=0.059708;SGB=172.05;VDB=0.503319;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L451|1663|LOC_Os09g09050|protein_coding|CODING|LOC_Os09g09050.1|3|1) FN1423-S.SNP.9:4825158 chr09:004825158 0 W/4825158-4825158 FN1423-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g09050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1627-S.SNP.9:4829184 chr09:004829184 0 W/4829184-4829184 FN1627-S Single Base Substitution G-A INTERGENIC Homo SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2444.SNP.9:4832565 chr09:004832565 0 W/4832565-4832565 FN2444 SNP G -> A AC=1;AN=200;BQB=0.994088;DP=4248;DP4=1818,1977,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.47956e-15;MQSB=0.128663;RPB=0.923592;SGB=27.1468;VDB=0.21267;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.9:4852850 chr09:004852850 0 W/4852850-4852850 FN2223-S SNP A -> T AC=1;AN=190;BQB=0.987317;DP=4739;DP4=2182,2098,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.145178;MQB=0.940782;MQSB=5.43709e-09;RPB=0.855319;SGB=-42.5702;VDB=0.658493;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.9:4856668 chr09:004856668 0 W/4856668-4856668 FN448-S Single Base Substitution A-G INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3546-S.SNP.9:4864503 chr09:004864503 0 W/4864503-4864503 FN3546-S SNP A -> C AC=2;AN=188;BQB=0.987016;DP=2740;DP4=1079,1573,11,7;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.126642;MQB=0.883148;MQSB=0;RPB=0.99824;SGB=53.7007;VDB=0.566796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.9:4866449 chr09:004866449 0 W/4866449-4866449 FN3687-S SNP G -> A AC=1;AN=190;BQB=0.989114;DP=3129;DP4=1591,1281,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.139981;MQB=0.588884;MQSB=4.26723e-21;RPB=0.455232;SGB=30.8803;VDB=0.208567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A296V|896|LOC_Os09g09100|protein_coding|CODING|LOC_Os09g09100.1|3|1) FN3715-S.SNP.9:4867313 chr09:004867313 0 W/4867313-4867313 FN3715-S SNP T -> C AC=2;AN=190;BQB=0.97771;DP=2847;DP4=1289,1396,10,14;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00561995;MQB=0.0024897;MQSB=0.999958;RPB=0.963141;SGB=103.742;VDB=0.750478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N178S|896|LOC_Os09g09100|protein_coding|CODING|LOC_Os09g09100.1|2|1) FN4020-S.SNP.9:4870904 chr09:004870904 0 W/4870904-4870904 FN4020-S SNP G -> C AC=1;AN=168;BQB=0.688634;DP=2346;DP4=1223,662,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0524297;MQB=0.902201;MQSB=2.38956e-11;RPB=0.566746;SGB=65.6253;VDB=0.265537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cga/Gga|R390G|393|LOC_Os09g09110|protein_coding|CODING|LOC_Os09g09110.1|3|1) FN2781-S.SNP.9:4882231 chr09:004882231 0 W/4882231-4882231 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.995388;DP=2611;DP4=1512,907,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.114516;MQB=0.364715;MQSB=2.93666e-22;RPB=0.648329;SGB=2.96892;VDB=0.430356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.9:4885704 chr09:004885704 0 W/4885704-4885704 FN2625-S SNP C -> G AC=1;AN=200;BQB=0.792578;DP=4545;DP4=2183,2117,20,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00132013;MQB=1.60113e-19;MQSB=0.711656;RPB=0.767707;SGB=-222.797;VDB=0.38624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R422P|1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|3|1) FN2625-S.SNP.9:4885740 chr09:004885740 0 W/4885740-4885740 FN2625-S SNP G -> C AC=1;AN=200;BQB=0.694319;DP=4459;DP4=2053,2147,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09247e-12;MQSB=0.704556;RPB=0.840928;SGB=72.7161;VDB=0.982837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A410G|1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|3|1) FN-285.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN-285 Single Base Substitution A-G INTRON HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN1278-S Single Base Substitution A-G INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2572-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN2572-S SNP A -> G AC=1;AN=198;BQB=0.737628;DP=3981;DP4=1775,1970,16,27;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0216026;MQB=0.0226575;MQSB=7.77436e-22;RPB=0.526871;SGB=96.8175;VDB=0.992629;EFF=INTRON(MODIFIER||||1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|2|1) FN2572-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN2572-S Single Base Substitution A-G INTRON HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3450-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN3450-S SNP A -> G AC=2;AN=184;BQB=0.986216;DP=3091;DP4=1509,1488,15,12;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00614688;MQB=0.0203518;MQSB=0.00026131;RPB=0.298757;SGB=116.569;VDB=0.638673;EFF=INTRON(MODIFIER||||1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|2|1) FN3535-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN3535-S SNP A -> G AC=2;AN=188;BQB=0.988567;DP=3157;DP4=1527,1544,17,12;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00665188;MQB=0.0504645;MQSB=5.77311e-08;RPB=0.813154;SGB=92.677;VDB=0.686871;EFF=INTRON(MODIFIER||||1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|2|1) FN4087-S.SNP.9:4886230 chr09:004886230 0 W/4886230-4886230 FN4087-S SNP A -> G AC=2;AN=182;BQB=0.845854;DP=2994;DP4=1384,1535,8,8;HOB=0.0217365;ICB=0.494567;MQ=44;MQ0F=0.0143621;MQB=0.0532257;MQSB=1.31018e-05;RPB=0.633852;SGB=66.6657;VDB=0.304368;EFF=INTRON(MODIFIER||||1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|2|1) FN3302-S.SNP.9:4886335 chr09:004886335 0 W/4886335-4886335 FN3302-S SNP C -> A AC=2;AN=184;BQB=0.900073;DP=3526;DP4=2124,1303,14,10;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.0280771;MQB=0.964757;MQSB=0.0390372;RPB=0.534621;SGB=74.4875;VDB=0.189527;EFF=INTRON(MODIFIER||||1366|LOC_Os09g09130|protein_coding|CODING|LOC_Os09g09130.1|2|1) FN1153-S.SNP.9:4886633 chr09:004886633 0 W/4886633-4886633 FN1153-S Single Base Substitution G-C INTRON HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN-36.SNP.9:4893608 chr09:004893608 0 W/4893608-4893608 FN-36 Single Base Substitution C-T INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1119-S.SNP.9:4893608 chr09:004893608 0 W/4893608-4893608 FN1119-S Single Base Substitution C-T INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN899-S.SNP.9:4897193 chr09:004897193 0 W/4897193-4897193 FN899-S Single Base Substitution T-C INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN-55.SNP.9:4897428 chr09:004897428 0 W/4897428-4897428 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN2664-S.SNP.9:4907812 chr09:004907812 0 W/4907812-4907812 FN2664-S SNP G -> T AC=1;AN=200;BQB=0.832819;DP=4790;DP4=2160,2348,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.66822e-14;MQSB=0.974711;RPB=0.996694;SGB=95.7111;VDB=0.660675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.9:4908518 chr09:004908518 0 W/4908518-4908518 FN2219-S SNP A -> G AC=1;AN=190;BQB=0.789553;DP=4602;DP4=2263,1940,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000217297;MQB=3.72927e-09;MQSB=0.998766;RPB=0.906208;SGB=43.2083;VDB=0.376277;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.9:4915841 chr09:004915841 0 W/4915841-4915841 FN1123-S Single Base Substitution A-T INTERGENIC HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2572-S.SNP.9:4916966 chr09:004916966 0 W/4916966-4916966 FN2572-S SNP T -> C AC=1;AN=198;BQB=0.301236;DP=6242;DP4=2931,2987,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0317206;MQB=0.485297;MQSB=2.4128e-05;RPB=0.992385;SGB=57.8907;VDB=0.919435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.9:4926903 chr09:004926903 0 W/4926903-4926903 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.989849;DP=2831;DP4=1572,1188,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000706464;MQB=0.000418216;MQSB=0.993816;RPB=0.616519;SGB=58.2031;VDB=0.917906;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.9:4928181 chr09:004928181 0 W/4928181-4928181 FN321-S Single Base Substitution G-T INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN2235-S.SNP.9:4928291 chr09:004928291 0 W/4928291-4928291 FN2235-S SNP A -> G AC=1;AN=190;BQB=0.973438;DP=4667;DP4=1902,2398,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.86235e-12;MQSB=0.418648;RPB=0.751691;SGB=19.6499;VDB=0.869233;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.9:4936522 chr09:004936522 0 W/4936522-4936522 FN509-S Single Base Substitution G-T INTRON HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2221-S.SNP.9:4939789 chr09:004939789 0 W/4939789-4939789 FN2221-S SNP T -> C AC=1;AN=190;BQB=0.998118;DP=5167;DP4=2224,2603,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.38363e-15;MQSB=0.677665;RPB=0.978151;SGB=24.3115;VDB=0.369239;EFF=INTRON(MODIFIER||||842|LOC_Os09g09220|protein_coding|CODING|LOC_Os09g09220.1|3|1) FN926-S.SNP.9:4940287 chr09:004940287 0 W/4940287-4940287 FN926-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g09220 protein kinase domain containing protein, expressed SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN2587-S.SNP.9:4940294 chr09:004940294 0 W/4940294-4940294 FN2587-S SNP C -> T AC=1;AN=198;BQB=0.451688;DP=4251;DP4=2058,1959,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.25483e-14;MQSB=0.9413;RPB=0.347283;SGB=28.4908;VDB=0.560399;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T464M|842|LOC_Os09g09220|protein_coding|CODING|LOC_Os09g09220.1|4|1) FN858-S.SNP.9:4945289 chr09:004945289 0 W/4945289-4945289 FN858-S Single Base Substitution C-A INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN3773-S.SNP.9:4947649 chr09:004947649 0 W/4947649-4947649 FN3773-S SNP C -> T AC=1;AN=190;BQB=0.863462;DP=2359;DP4=1131,1115,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68867e-07;MQSB=0.996324;RPB=0.447215;SGB=4.11112;VDB=0.994844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.9:4950082 chr09:004950082 0 W/4950082-4950082 FN3859-S SNP C -> T AC=1;AN=158;BQB=0.999987;DP=3397;DP4=1477,1799,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.14189;MQB=0.238402;MQSB=0.000884176;RPB=0.16778;SGB=60.1755;VDB=0.147197;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A288V|1952|LOC_Os09g09240|protein_coding|CODING|LOC_Os09g09240.1|1|1) FN2558-S.SNP.9:4951254 chr09:004951254 0 W/4951254-4951254 FN2558-S SNP C -> T AC=2;AN=198;BQB=0.066404;DP=4038;DP4=2066,1662,12,21;HOB=0.019998;ICB=0.495001;MQ=31;MQ0F=0.145617;MQB=0.554679;MQSB=5.53513e-43;RPB=0.999996;SGB=70.8662;VDB=0.654222;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q679*|1952|LOC_Os09g09240|protein_coding|CODING|LOC_Os09g09240.1|1|1);LOF=(LOC_Os09g09240|LOC_Os09g09240|1|1.00);NMD=(LOC_Os09g09240|LOC_Os09g09240|1|1.00) FN3982-S.SNP.9:4953017 chr09:004953017 0 W/4953017-4953017 FN3982-S SNP C -> T AC=2;AN=168;BQB=0.945044;DP=3161;DP4=1718,1332,17,12;HOB=0.0235261;ICB=0.494119;MQ=27;MQ0F=0.155647;MQB=0.795671;MQSB=8.61849e-22;RPB=0.915147;SGB=123.066;VDB=0.282025;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L1247|1952|LOC_Os09g09240|protein_coding|CODING|LOC_Os09g09240.1|2|1) FN2151-S.SNP.9:4955326 chr09:004955326 0 W/4955326-4955326 FN2151-S SNP C -> T AC=1;AN=168;BQB=0.775475;DP=3422;DP4=1710,1682,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.000584454;MQB=0.00132982;MQSB=0.0218767;RPB=0.512354;SGB=-14.5109;VDB=0.79117;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.9:4957505 chr09:004957505 0 W/4957505-4957505 FN745-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g09250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2235-S.SNP.9:4959528 chr09:004959528 0 W/4959528-4959528 FN2235-S SNP T -> A AC=1;AN=190;BQB=0.999482;DP=4736;DP4=2300,2021,21,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00126689;MQB=1.19469e-14;MQSB=0.00931982;RPB=0.877398;SGB=35.1887;VDB=0.592345;EFF=INTERGENIC(MODIFIER||||||||||1) FN702-S.SNP.9:4960346 chr09:004960346 0 W/4960346-4960346 FN702-S Single Base Substitution G-C INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2320.SNP.9:4969499 chr09:004969499 0 W/4969499-4969499 FN2320 SNP A -> G AC=2;AN=192;BQB=0.979297;DP=5089;DP4=2453,2341,22,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.87763e-19;MQSB=0.991712;RPB=0.221908;SGB=177.012;VDB=0.513905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.9:4973436 chr09:004973436 0 W/4973436-4973436 FN3637-S SNP G -> A AC=2;AN=190;BQB=0.991534;DP=2847;DP4=1315,1415,16,17;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000351247;MQB=1.51782e-15;MQSB=0.0320197;RPB=0.372768;SGB=144.727;VDB=0.078072;EFF=START_GAINED(LOW||||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.2|4|1),START_GAINED(LOW||||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.1|1|1),UTR_5_PRIME(MODIFIER||10||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.2|4|1),UTR_5_PRIME(MODIFIER||10||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.1|1|1) FN975-S.SNP.9:4973997 chr09:004973997 0 W/4973997-4973997 FN975-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. W466-5-1.SNP.9:4975088 chr09:004975088 0 W/4975088-4975088 W466-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3579-S.SNP.9:4977240 chr09:004977240 0 W/4977240-4977240 FN3579-S SNP G -> T AC=1;AN=188;BQB=0.997316;DP=3493;DP4=1998,1428,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.68079e-10;MQSB=0.999999;RPB=0.978044;SGB=62.6088;VDB=0.926774;EFF=UTR_5_PRIME(MODIFIER||3814||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.2|4|1),UTR_5_PRIME(MODIFIER||3814||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.1|1|1) FN3579-S.SNP.9:4977241 chr09:004977241 0 W/4977241-4977241 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.880309;DP=3497;DP4=1981,1412,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.89177e-10;MQSB=0.974769;RPB=0.95043;SGB=62.6088;VDB=0.927436;EFF=UTR_5_PRIME(MODIFIER||3815||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.2|4|1),UTR_5_PRIME(MODIFIER||3815||222|LOC_Os09g09290|protein_coding|CODING|LOC_Os09g09290.1|1|1) FN891-S.SNP.9:4979645 chr09:004979645 0 W/4979645-4979645 FN891-S Single Base Substitution G-C UTR_5_PRIME HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3800-S.SNP.9:4982811 chr09:004982811 0 W/4982811-4982811 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.969702;DP=2753;DP4=1311,1328,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.52417e-05;MQSB=0.995861;RPB=0.964743;SGB=35.4339;VDB=0.922502;EFF=INTERGENIC(MODIFIER||||||||||1) FN322-S.SNP.9:4983928 chr09:004983928 0 W/4983928-4983928 FN322-S Single Base Substitution T-A INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2386.SNP.9:4984183 chr09:004984183 0 W/4984183-4984183 FN2386 SNP G -> A AC=1;AN=192;BQB=0.034957;DP=4721;DP4=2338,1968,18,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000635459;MQB=1.24943e-08;MQSB=8.8971e-12;RPB=0.973741;SGB=24.5626;VDB=0.107252;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.9:4985353 chr09:004985353 0 W/4985353-4985353 FN923-S Single Base Substitution T-A INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2340.SNP.9:4986531 chr09:004986531 0 W/4986531-4986531 FN2340 SNP G -> A AC=1;AN=192;BQB=0.679616;DP=5065;DP4=2402,2408,9,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000394867;MQB=5.05673e-06;MQSB=0.926356;RPB=0.134547;SGB=18.6565;VDB=0.545162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.9:4988350 chr09:004988350 0 W/4988350-4988350 FN2471 SNP G -> A AC=1;AN=200;BQB=0.501269;DP=5578;DP4=2994,2092,27,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.55361e-16;MQSB=0.647989;RPB=0.709881;SGB=-178.197;VDB=0.813256;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.9:4988365 chr09:004988365 0 W/4988365-4988365 FN881-S Single Base Substitution C-T INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN881-S.SNP.9:4988366 chr09:004988366 0 W/4988366-4988366 FN881-S Single Base Substitution C-T INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. W450-6-1.SNP.9:4991551 chr09:004991551 0 W/4991551-4991551 W450-6-1 Single Base Substitution T-C UTR_3_PRIME HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN806-S.SNP.9:4992429 chr09:004992429 0 W/4992429-4992429 FN806-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN-336.SNP.9:4995258 chr09:004995258 0 W/4995258-4995258 FN-336 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g09330 expressed protein SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2599-S.SNP.9:4995555 chr09:004995555 0 W/4995555-4995555 FN2599-S SNP T -> C AC=1;AN=198;BQB=0.887998;DP=4301;DP4=2145,1908,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.17486e-12;MQSB=0.0487051;RPB=0.341946;SGB=22.1104;VDB=0.107942;EFF=UTR_5_PRIME(MODIFIER||1790||122|LOC_Os09g09330|protein_coding|CODING|LOC_Os09g09330.2|3|1),INTRON(MODIFIER||||164|LOC_Os09g09330|protein_coding|CODING|LOC_Os09g09330.1|3|1) FN1617-S.SNP.9:5000671 chr09:005000671 0 W/5000671-5000671 FN1617-S Single Base Substitution C-T INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2789-S.SNP.9:5003346 chr09:005003346 0 W/5003346-5003346 FN2789-S SNP G -> T AC=1;AN=198;BQB=0.999985;DP=7504;DP4=3838,3141,17,11;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0;MQB=8.71575e-10;MQSB=0.368612;RPB=0.0669998;SGB=-7.28946;VDB=0.623157;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.9:5007943 chr09:005007943 0 W/5007943-5007943 FN920-S Single Base Substitution T-C INTRON HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN2725-S.SNP.9:5008652 chr09:005008652 0 W/5008652-5008652 FN2725-S SNP C -> A AC=1;AN=200;BQB=0.896372;DP=8210;DP4=2648,5044,11,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.73689e-07;MQSB=0.908195;RPB=0.0636176;SGB=-63.8899;VDB=0.124884;EFF=INTRON(MODIFIER||||1095|LOC_Os09g09360|protein_coding|CODING|LOC_Os09g09360.1|2|1) FN2583-S.SNP.9:5012363 chr09:005012363 0 W/5012363-5012363 FN2583-S SNP C -> T AC=2;AN=200;BQB=0.593221;DP=4942;DP4=2485,2128,25,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17826e-22;MQSB=0.649838;RPB=0.613284;SGB=201.63;VDB=0.126294;EFF=INTRON(MODIFIER||||1095|LOC_Os09g09360|protein_coding|CODING|LOC_Os09g09360.1|9|1) FN_789-3-1.SNP.9:5023505 chr09:005023505 0 W/5023505-5023505 FN_789-3-1 Single Base Substitution T-A INTRON Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN500-S.SNP.9:5025545 chr09:005025545 0 W/5025545-5025545 FN500-S Single Base Substitution G-T INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN500-S.SNP.9:5025546 chr09:005025546 0 W/5025546-5025546 FN500-S Single Base Substitution A-T INTRON HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1716-S.SNP.9:5031651 chr09:005031651 0 W/5031651-5031651 FN1716-S SNP T -> C AC=2;AN=188;BQB=0.00870199;DP=3753;DP4=1861,1834,32,21;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=7.59706e-09;MQSB=0.828997;RPB=0.748153;SGB=5.10215;VDB=0.877741;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.9:5032299 chr09:005032299 0 W/5032299-5032299 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-362.SNP.9:5038416 chr09:005038416 0 W/5038416-5038416 FN-362 Single Base Substitution T-C INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN4202-S.SNP.9:5041037 chr09:005041037 0 W/5041037-5041037 FN4202-S SNP A -> T AC=2;AN=170;BQB=0.893412;DP=1839;DP4=835,904,16,16;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.00652529;MQB=6.03053e-05;MQSB=0.275361;RPB=0.835699;SGB=91.3011;VDB=0.0927076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.9:5085313 chr09:005085313 0 W/5085313-5085313 FN2267-S SNP C -> G AC=1;AN=190;BQB=0.327044;DP=4587;DP4=2086,2190,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0;MQB=0.00573451;MQSB=0.365026;RPB=0.994033;SGB=43.2083;VDB=0.633655;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.9:5097690 chr09:005097690 0 W/5097690-5097690 FN1213-S Single Base Substitution A-G INTRON HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN3946-S.SNP.9:5100226 chr09:005100226 0 W/5100226-5100226 FN3946-S SNP T -> G AC=1;AN=168;BQB=0.68359;DP=2614;DP4=1276,1207,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.37394e-10;MQSB=0.93341;RPB=0.973185;SGB=39.2004;VDB=0.302098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Gtt|F355V|774|LOC_Os09g09470|protein_coding|CODING|LOC_Os09g09470.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Gtt|F216V|635|LOC_Os09g09470|protein_coding|CODING|LOC_Os09g09470.2|6|1) FN1269-S.SNP.9:5101207 chr09:005101207 0 W/5101207-5101207 FN1269-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN3915-S.SNP.9:5123309 chr09:005123309 0 W/5123309-5123309 FN3915-S SNP G -> A AC=1;AN=158;BQB=0.918852;DP=1346;DP4=110,1112,1,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000223149;MQSB=0.254364;RPB=0.821751;SGB=17.2267;VDB=0.784517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.9:5123448 chr09:005123448 0 W/5123448-5123448 FN1553-S Single Base Substitution G-A INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2734-S.SNP.9:5133477 chr09:005133477 0 W/5133477-5133477 FN2734-S SNP C -> A AC=1;AN=200;BQB=0.464093;DP=10143;DP4=5204,4473,19,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=9.85902e-05;MQB=9.90718e-12;MQSB=6.12415e-05;RPB=0.914658;SGB=23.9365;VDB=0.0105191;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.9:5140617 chr09:005140617 0 W/5140617-5140617 FN973-S Single Base Substitution A-T INTRON HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2349.SNP.9:5146504 chr09:005146504 0 W/5146504-5146504 FN2349 SNP A -> G AC=1;AN=192;BQB=0.748014;DP=3991;DP4=1364,2333,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0102731;MQB=0.969994;MQSB=1.40426e-11;RPB=0.175352;SGB=43.3444;VDB=0.125803;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.9:5147195 chr09:005147195 0 W/5147195-5147195 FN1484-S Single Base Substitution T-G INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN492-S.SNP.9:5148578 chr09:005148578 0 W/5148578-5148578 FN492-S Single Base Substitution G-A INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2701-S.SNP.9:5150424 chr09:005150424 0 W/5150424-5150424 FN2701-S SNP T -> A AC=2;AN=200;BQB=0.763777;DP=4659;DP4=2226,2193,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.9772e-24;MQSB=0.927673;RPB=0.483218;SGB=92.009;VDB=0.782708;EFF=UTR_3_PRIME(MODIFIER||1287||603|LOC_Os09g09540|protein_coding|CODING|LOC_Os09g09540.1|5|1) FN3691-S.SNP.9:5152574 chr09:005152574 0 W/5152574-5152574 FN3691-S SNP A -> G AC=1;AN=190;BQB=0.436723;DP=2813;DP4=1377,1317,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.32987e-05;MQSB=0.951622;RPB=0.473715;SGB=13.4442;VDB=0.420136;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R366|603|LOC_Os09g09540|protein_coding|CODING|LOC_Os09g09540.1|2|1) FN3057-S.SNP.9:5153401 chr09:005153401 0 W/5153401-5153401 FN3057-S SNP A -> G AC=1;AN=184;BQB=0.857192;DP=2998;DP4=1463,1428,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90435e-06;MQSB=0.903031;RPB=0.490939;SGB=18.2315;VDB=0.230819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F91L|603|LOC_Os09g09540|protein_coding|CODING|LOC_Os09g09540.1|2|1) FN765-S.SNP.9:5165371 chr09:005165371 0 W/5165371-5165371 FN765-S Single Base Substitution T-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1423-S.SNP.9:5167579 chr09:005167579 0 W/5167579-5167579 FN1423-S Single Base Substitution C-A STOP_GAINED HET LOC_Os09g09580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN806-S.SNP.9:5167771 chr09:005167771 0 W/5167771-5167771 FN806-S Single Base Substitution G-A STOP_GAINED HET LOC_Os09g09580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN632-S.SNP.9:5168337 chr09:005168337 0 W/5168337-5168337 FN632-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g09580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2181-S.SNP.9:5168412 chr09:005168412 0 W/5168412-5168412 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.995359;DP=4758;DP4=2232,2249,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.98767e-10;MQSB=0.97718;RPB=0.933046;SGB=8.77275;VDB=0.25051;EFF=INTRON(MODIFIER||||610|LOC_Os09g09580|protein_coding|CODING|LOC_Os09g09580.1|1|1) FN792-S.SNP.9:5168731 chr09:005168731 0 W/5168731-5168731 FN792-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g09580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN-315.SNP.9:5171851 chr09:005171851 0 W/5171851-5171851 FN-315 Single Base Substitution G-T INTERGENIC HOMO SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN767-S.SNP.9:5174124 chr09:005174124 0 W/5174124-5174124 FN767-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2729-S.SNP.9:5175425 chr09:005175425 0 W/5175425-5175425 FN2729-S SNP T -> C AC=1;AN=200;BQB=0.991279;DP=4826;DP4=2195,2439,17,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.77e-16;MQSB=0.871553;RPB=0.209016;SGB=97.9523;VDB=0.804993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1367-S.SNP.9:5175689 chr09:005175689 0 W/5175689-5175689 FN1367-S Single Base Substitution G-T INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1297-S.SNP.9:5177567 chr09:005177567 0 W/5177567-5177567 FN1297-S Single Base Substitution G-A INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-293.SNP.9:5181539 chr09:005181539 0 W/5181539-5181539 FN-293 Single Base Substitution G-A INTERGENIC HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN-327.SNP.9:5190394 chr09:005190394 0 W/5190394-5190394 FN-327 Single Base Substitution T-A INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN2658-S.SNP.9:5191377 chr09:005191377 0 W/5191377-5191377 FN2658-S SNP C -> A AC=1;AN=200;BQB=0.840848;DP=4926;DP4=2328,2270,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65079e-09;MQSB=0.870125;RPB=0.780018;SGB=40.2696;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3330-S.SNP.9:5199142 chr09:005199142 0 W/5199142-5199142 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.955697;DP=3074;DP4=1414,1589,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.155823;MQB=0.999836;MQSB=4.00974e-31;RPB=0.916469;SGB=48.7425;VDB=0.290783;EFF=INTRON(MODIFIER||||143|LOC_Os09g09650|protein_coding|CODING|LOC_Os09g09650.1|2|1) FN916-S.SNP.9:5204207 chr09:005204207 0 W/5204207-5204207 FN916-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g09660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN4272-S.SNP.9:5208839 chr09:005208839 0 W/5208839-5208839 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.98745;DP=2372;DP4=1007,1279,14,15;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.010118;MQB=2.04037e-10;MQSB=0.999432;RPB=0.954632;SGB=89.9604;VDB=0.528747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.9:5215558 chr09:005215558 0 W/5215558-5215558 FN1548-S SNP G -> A AC=2;AN=188;BQB=0.2007;DP=3889;DP4=1846,1984,18,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.67785e-16;MQSB=0.966915;RPB=0.569312;SGB=-46.9554;VDB=0.903731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V81I|147|LOC_Os09g09670|protein_coding|CODING|LOC_Os09g09670.1|3|1) FN4178-S.SNP.9:5216036 chr09:005216036 0 W/5216036-5216036 FN4178-S SNP A -> G AC=1;AN=170;BQB=0.799416;DP=2648;DP4=1348,1227,11,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.66671e-08;MQSB=0.939386;RPB=0.855573;SGB=56.7575;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.9:5221584 chr09:005221584 0 W/5221584-5221584 FN1094-S Single Base Substitution G-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2791-S.SNP.9:5231848 chr09:005231848 0 W/5231848-5231848 FN2791-S SNP G -> T AC=1;AN=198;BQB=0.920196;DP=4211;DP4=2292,1678,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0672049;MQB=0.439241;MQSB=6.11054e-09;RPB=0.976804;SGB=34.5346;VDB=0.031051;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P76|528|LOC_Os09g09690|protein_coding|CODING|LOC_Os09g09690.1|2|1) FN3331-S.SNP.9:5234439 chr09:005234439 0 W/5234439-5234439 FN3331-S SNP T -> C AC=1;AN=184;BQB=0.959781;DP=2834;DP4=985,1791,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.139379;MQB=0.78564;MQSB=6.91681e-42;RPB=0.379575;SGB=30.6558;VDB=0.691871;EFF=INTRON(MODIFIER||||528|LOC_Os09g09690|protein_coding|CODING|LOC_Os09g09690.1|1|1) FN1724-S.SNP.9:5234579 chr09:005234579 0 W/5234579-5234579 FN1724-S SNP G -> A AC=1;AN=188;BQB=0.00108813;DP=3294;DP4=1837,1429,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000126771;MQSB=0.0800946;RPB=0.520261;SGB=-13.9132;VDB=0.884044;EFF=INTRON(MODIFIER||||528|LOC_Os09g09690|protein_coding|CODING|LOC_Os09g09690.1|1|1) FN924-S.SNP.9:5235240 chr09:005235240 0 W/5235240-5235240 FN924-S Single Base Substitution C-A INTRON HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN1561-S.SNP.9:5235311 chr09:005235311 0 W/5235311-5235311 FN1561-S Single Base Substitution T-C INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN565-S.SNP.9:5245239 chr09:005245239 0 W/5245239-5245239 FN565-S Single Base Substitution C-A INTERGENIC HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. CW-631-3-1.SNP.9:5249895 chr09:005249895 0 W/5249895-5249895 CW-631-3-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN967-S.SNP.9:5249902 chr09:005249902 0 W/5249902-5249902 FN967-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g09700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN511-S.SNP.9:5256431 chr09:005256431 0 W/5256431-5256431 FN511-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g09710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1278-S.SNP.9:5257029 chr09:005257029 0 W/5257029-5257029 FN1278-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1383-S.SNP.9:5257757 chr09:005257757 0 W/5257757-5257757 FN1383-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN-149.SNP.9:5271313 chr09:005271313 0 W/5271313-5271313 FN-149 Single Base Substitution C-T INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1534-S.SNP.9:5271313 chr09:005271313 0 W/5271313-5271313 FN1534-S Single Base Substitution C-T INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2551-S.SNP.9:5271313 chr09:005271313 0 W/5271313-5271313 FN2551-S SNP C -> T AC=2;AN=198;BQB=0.246617;DP=4249;DP4=1958,2058,21,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.07716e-25;MQSB=0.95644;RPB=0.998944;SGB=205.783;VDB=0.961085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.9:5273227 chr09:005273227 0 W/5273227-5273227 FN3957-S SNP C -> A AC=1;AN=168;BQB=0.994341;DP=2819;DP4=1642,1061,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.87517e-07;MQSB=0.830669;RPB=0.960141;SGB=52.1728;VDB=0.599178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.9:5274700 chr09:005274700 0 W/5274700-5274700 FN3452-S SNP A -> G AC=2;AN=184;BQB=0.704835;DP=2659;DP4=1193,1358,6,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.06036e-08;MQSB=0.819769;RPB=0.821255;SGB=42.7914;VDB=0.947828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.9:5275783 chr09:005275783 0 W/5275783-5275783 FN3857-S SNP G -> A AC=2;AN=158;BQB=0.592158;DP=1294;DP4=698,443,10,11;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.00112e-06;MQSB=0.766738;RPB=0.895907;SGB=68.0323;VDB=0.136664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.9:5284467 chr09:005284467 0 W/5284467-5284467 FN2283 SNP G -> T AC=1;AN=192;BQB=0.869506;DP=5018;DP4=2313,2392,18,18;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00697489;MQB=4.96844e-08;MQSB=0.38169;RPB=0.559346;SGB=37.0774;VDB=0.564932;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L992F|1962|LOC_Os09g09760|protein_coding|CODING|LOC_Os09g09760.1|2|1) FN4069-S.SNP.9:5290278 chr09:005290278 0 W/5290278-5290278 FN4069-S SNP C -> T AC=1;AN=182;BQB=0.849408;DP=3129;DP4=1951,1050,14,7;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.120166;MQB=0.924711;MQSB=0.987391;RPB=0.995927;SGB=63.7146;VDB=0.858112;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.9:5290767 chr09:005290767 0 W/5290767-5290767 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.999623;DP=3990;DP4=1861,2053,11,13;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.0546366;MQB=0.107527;MQSB=2.66161e-05;RPB=0.993564;SGB=74.2472;VDB=0.906493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1539I|1680|LOC_Os09g09770|protein_coding|CODING|LOC_Os09g09770.1|4|1) FN2584-S.SNP.9:5291882 chr09:005291882 0 W/5291882-5291882 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.980425;DP=4194;DP4=1839,2177,19,8;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0419647;MQB=0.924787;MQSB=1.32014e-21;RPB=0.318558;SGB=86.8856;VDB=0.188472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1223S|1680|LOC_Os09g09770|protein_coding|CODING|LOC_Os09g09770.1|3|1) FN1114-S.SNP.9:5292647 chr09:005292647 0 W/5292647-5292647 FN1114-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g09770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1540-S.SNP.9:5294694 chr09:005294694 0 W/5294694-5294694 FN1540-S Single Base Substitution T-A INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN455-S.SNP.9:5294694 chr09:005294694 0 W/5294694-5294694 FN455-S Single Base Substitution T-A INTRON HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN3342-S.SNP.9:5301295 chr09:005301295 0 W/5301295-5301295 FN3342-S SNP G -> A AC=2;AN=184;BQB=0.820036;DP=3877;DP4=1705,2043,23,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.90074e-21;MQSB=0.645435;RPB=0.663369;SGB=197.961;VDB=0.351891;EFF=INTRON(MODIFIER||||990|LOC_Os09g09780|protein_coding|CODING|LOC_Os09g09780.1|3|1) FN836-S.SNP.9:5317800 chr09:005317800 0 W/5317800-5317800 FN836-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g09810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN973-S.SNP.9:5327283 chr09:005327283 0 W/5327283-5327283 FN973-S Single Base Substitution G-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN323-S.SNP.9:5328275 chr09:005328275 0 W/5328275-5328275 FN323-S Single Base Substitution C-T INTRON HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1133-S.SNP.9:5328802 chr09:005328802 0 W/5328802-5328802 FN1133-S Single Base Substitution T-A INTRON HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2316.SNP.9:5335697 chr09:005335697 0 W/5335697-5335697 FN2316 SNP T -> C AC=1;AN=192;BQB=0.5038;DP=4914;DP4=2185,2412,13,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.62326e-18;MQSB=0.966817;RPB=0.901982;SGB=35.5131;VDB=0.71246;EFF=INTERGENIC(MODIFIER||||||||||1) FN3772-S.SNP.9:5337740 chr09:005337740 0 W/5337740-5337740 FN3772-S SNP T -> G AC=2;AN=190;BQB=0.793802;DP=3032;DP4=1427,1408,17,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.46371e-16;MQSB=0.998154;RPB=0.116779;SGB=56.8601;VDB=0.0423945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.9:5342695 chr09:005342695 0 W/5342695-5342695 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.862175;DP=4944;DP4=2179,2520,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4455e-10;MQSB=0.925746;RPB=0.911113;SGB=-10.6896;VDB=0.989493;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.9:5347013 chr09:005347013 0 W/5347013-5347013 FN4128-S SNP C -> G AC=1;AN=182;BQB=0.965051;DP=2987;DP4=1351,1570,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.97318e-07;MQSB=0.982194;RPB=0.99854;SGB=28.6061;VDB=0.319127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2345.SNP.9:5351332 chr09:005351332 0 W/5351332-5351332 FN2345 SNP T -> C AC=2;AN=192;BQB=0.00339453;DP=5391;DP4=2561,2551,41,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.5065e-30;MQSB=0.57199;RPB=0.579768;SGB=164.824;VDB=0.757644;EFF=INTRON(MODIFIER||||191|LOC_Os09g09850|protein_coding|CODING|LOC_Os09g09850.1|1|1) FN-181.SNP.9:5353288 chr09:005353288 0 W/5353288-5353288 FN-181 Single Base Substitution T-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2532-S.SNP.9:5354338 chr09:005354338 0 W/5354338-5354338 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.96607;DP=4201;DP4=2047,1909,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0445132;MQB=0.0409487;MQSB=0;RPB=0.706283;SGB=95.5;VDB=0.602038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.9:5356654 chr09:005356654 0 W/5356654-5356654 FN1514-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g09860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1514-S.SNP.9:5356657 chr09:005356657 0 W/5356657-5356657 FN1514-S Single Base Substitution C-T STOP_GAINED HET LOC_Os09g09860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1675-S.SNP.9:5365438 chr09:005365438 0 W/5365438-5365438 FN1675-S SNP T -> G AC=1;AN=188;BQB=0.00270144;DP=3168;DP4=1690,1451,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.05964e-07;MQSB=0.0181723;RPB=0.986324;SGB=-60.4458;VDB=0.835804;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.9:5366721 chr09:005366721 0 W/5366721-5366721 FN1228-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN690-S.SNP.9:5367657 chr09:005367657 0 W/5367657-5367657 FN690-S Single Base Substitution G-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1749-S.SNP.9:5370254 chr09:005370254 0 W/5370254-5370254 FN1749-S SNP T -> C AC=1;AN=188;BQB=0.468541;DP=3616;DP4=1432,2151,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.45362e-08;MQSB=0.95009;RPB=0.731932;SGB=-11.74;VDB=0.882682;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.9:5379148 chr09:005379148 0 W/5379148-5379148 FN_543-2-6 Single Base Substitution C-A HET LOC_Os09g09900 expressed protein SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. W463-2-1.SNP.9:5384320 chr09:005384320 0 W/5384320-5384320 W463-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3507-S.SNP.9:5392367 chr09:005392367 0 W/5392367-5392367 FN3507-S SNP C -> T AC=1;AN=188;BQB=0.958049;DP=3219;DP4=1583,1571,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.03487e-10;MQSB=0.95046;RPB=0.750733;SGB=62.6088;VDB=0.650595;EFF=INTRON(MODIFIER||||176|LOC_Os09g09920|protein_coding|CODING|LOC_Os09g09920.1|1|1) FN2457.SNP.9:5395805 chr09:005395805 0 W/5395805-5395805 FN2457 SNP C -> T AC=1;AN=200;BQB=0.633587;DP=4323;DP4=2216,1881,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000231321;MQB=7.01246e-09;MQSB=0.695527;RPB=0.968496;SGB=68.0801;VDB=0.979696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D170N|176|LOC_Os09g09930|protein_coding|CODING|LOC_Os09g09930.1|4|1) FN1459-S.SNP.9:5395808 chr09:005395808 0 W/5395808-5395808 FN1459-S Single Base Substitution G-A STOP_GAINED HET LOC_Os09g09930 heavy metal transport/detoxification protein, putative, expressed SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN4231-S.SNP.9:5400388 chr09:005400388 0 W/5400388-5400388 FN4231-S SNP C -> T AC=2;AN=170;BQB=0.693647;DP=2418;DP4=1175,1167,14,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.13182e-11;MQSB=0.920425;RPB=0.911551;SGB=101.184;VDB=0.309728;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.9:5400444 chr09:005400444 0 W/5400444-5400444 FN780-S Single Base Substitution C-T INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN780-S.SNP.9:5400445 chr09:005400445 0 W/5400445-5400445 FN780-S Single Base Substitution A-T INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN373-S.SNP.9:5406018 chr09:005406018 0 W/5406018-5406018 FN373-S Single Base Substitution A-T INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN-301.SNP.9:5408034 chr09:005408034 0 W/5408034-5408034 FN-301 Single Base Substitution T-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1286-S.SNP.9:5408035 chr09:005408035 0 W/5408035-5408035 FN1286-S Single Base Substitution A-T INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN573-S.SNP.9:5412654 chr09:005412654 0 W/5412654-5412654 FN573-S Single Base Substitution T-C INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN2794-S.SNP.9:5417995 chr09:005417995 0 W/5417995-5417995 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.815228;DP=4093;DP4=1992,1912,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47157e-09;MQSB=0.994162;RPB=0.695377;SGB=50.9344;VDB=0.930518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.9:5418445 chr09:005418445 0 W/5418445-5418445 FN2165-S SNP C -> A AC=1;AN=168;BQB=0.0173025;DP=4173;DP4=1977,2161,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.20253e-09;MQSB=0.00294288;RPB=0.814433;SGB=-63.3606;VDB=0.432065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.9:5420113 chr09:005420113 0 W/5420113-5420113 FN3568-S SNP G -> C AC=1;AN=188;BQB=0.999999;DP=3333;DP4=2017,1229,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.03797e-11;MQSB=0.600879;RPB=0.772521;SGB=85.3253;VDB=0.508688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.9:5422848 chr09:005422848 0 W/5422848-5422848 FN2689-S SNP C -> T AC=1;AN=200;BQB=0.985238;DP=4690;DP4=2136,2264,16,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14774e-12;MQSB=0.714304;RPB=0.940898;SGB=61.9006;VDB=0.975008;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A745V|1225|LOC_Os09g09960|protein_coding|CODING|LOC_Os09g09960.1|4|1) FN4153-S.SNP.9:5425721 chr09:005425721 0 W/5425721-5425721 FN4153-S SNP G -> A AC=2;AN=170;BQB=0.535161;DP=2564;DP4=1224,1243,16,15;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0144306;MQB=1.06571e-08;MQSB=0.00152077;RPB=0.321449;SGB=96.8457;VDB=0.834144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.9:5428340 chr09:005428340 0 W/5428340-5428340 FN3385-S SNP G -> C AC=1;AN=184;BQB=0.937712;DP=2589;DP4=1112,1375,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.75205e-06;MQSB=0.757409;RPB=0.883938;SGB=35.1773;VDB=0.26398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A108G|370|LOC_Os09g09970|protein_coding|CODING|LOC_Os09g09970.1|2|1) FN3283-S.SNP.9:5430725 chr09:005430725 0 W/5430725-5430725 FN3283-S SNP G -> C AC=1;AN=184;BQB=0.999899;DP=3020;DP4=1601,1228,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.56345e-07;MQSB=0.941921;RPB=0.848297;SGB=-2.32838;VDB=0.989162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.9:5434903 chr09:005434903 0 W/5434903-5434903 FN3767-S SNP G -> A AC=1;AN=190;BQB=0.999362;DP=3037;DP4=1408,1475,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00559763;MQB=0.956057;MQSB=3.45145e-07;RPB=0.960386;SGB=43.2083;VDB=0.575767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.9:5439598 chr09:005439598 0 W/5439598-5439598 FN2308 SNP G -> A AC=1;AN=192;BQB=0.245607;DP=5008;DP4=2106,2557,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.69563e-10;MQSB=0.0305871;RPB=0.690296;SGB=54.0374;VDB=0.248238;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1041|1349|LOC_Os09g09990|protein_coding|CODING|LOC_Os09g09990.1|7|1) FN625-S.SNP.9:5442385 chr09:005442385 0 W/5442385-5442385 FN625-S Single Base Substitution A-G INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3505-S.SNP.9:5442734 chr09:005442734 0 W/5442734-5442734 FN3505-S SNP C -> A AC=1;AN=188;BQB=0.999949;DP=2482;DP4=1355,1023,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000805802;MQB=1.8433e-05;MQSB=0.000173385;RPB=0.738775;SGB=48.979;VDB=0.769043;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.9:5444444 chr09:005444444 0 W/5444444-5444444 FN413-S Single Base Substitution A-T INTERGENIC HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN2549-S.SNP.9:5448656 chr09:005448656 0 W/5448656-5448656 FN2549-S SNP T -> A AC=1;AN=198;BQB=0.613314;DP=3927;DP4=1896,1897,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.92363e-08;MQSB=0.9101;RPB=0.381112;SGB=49.5489;VDB=0.00224346;EFF=INTRON(MODIFIER||||237|LOC_Os09g10000|protein_coding|CODING|LOC_Os09g10000.1|3|1) FN1722-S.SNP.9:5449081 chr09:005449081 0 W/5449081-5449081 FN1722-S SNP T -> C AC=1;AN=188;BQB=0.851962;DP=3979;DP4=1605,2340,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.5141e-10;MQSB=0.969323;RPB=0.306655;SGB=-38.7347;VDB=0.46837;EFF=INTRON(MODIFIER||||237|LOC_Os09g10000|protein_coding|CODING|LOC_Os09g10000.1|3|1) FN-399.SNP.9:5451167 chr09:005451167 0 W/5451167-5451167 FN-399 Single Base Substitution G-T INTERGENIC HOMO SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.9:5451167 chr09:005451167 0 W/5451167-5451167 FN399-S Single Base Substitution G-T INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN3863-S.SNP.9:5457301 chr09:005457301 0 W/5457301-5457301 FN3863-S SNP T -> G AC=1;AN=158;BQB=0.957714;DP=2392;DP4=1228,1040,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.58696e-06;MQSB=0.9728;RPB=0.983264;SGB=42.6978;VDB=0.902818;EFF=INTRON(MODIFIER||||333|LOC_Os09g10020|protein_coding|CODING|LOC_Os09g10020.1|4|1) FN_769-4-1.SNP.9:5459582 chr09:005459582 0 W/5459582-5459582 FN_769-4-1 Single Base Substitution A-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN-240.SNP.9:5461960 chr09:005461960 0 W/5461960-5461960 FN-240 Single Base Substitution G-A INTERGENIC HOMO SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1526-S.SNP.9:5465584 chr09:005465584 0 W/5465584-5465584 FN1526-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g10030 retrotransposon protein, putative, unclassified, expressed SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN2226-S.SNP.9:5466184 chr09:005466184 0 W/5466184-5466184 FN2226-S SNP A -> G AC=1;AN=190;BQB=0.941077;DP=5122;DP4=2760,1981,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0234283;MQB=3.78817e-06;MQSB=8.65035e-13;RPB=0.928612;SGB=39.6545;VDB=0.200115;EFF=INTRON(MODIFIER||||1767|LOC_Os09g10030|protein_coding|CODING|LOC_Os09g10030.1|2|1) FN1448-S.SNP.9:5471080 chr09:005471080 0 W/5471080-5471080 FN1448-S Single Base Substitution A-G INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3791-S.SNP.9:5472102 chr09:005472102 0 W/5472102-5472102 FN3791-S SNP G -> C AC=1;AN=190;BQB=0.88067;DP=3196;DP4=2005,1078,11,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.61701e-08;MQSB=0.89893;RPB=0.994799;SGB=49.0954;VDB=0.809805;EFF=UTR_3_PRIME(MODIFIER||8709||924|LOC_Os09g10054|protein_coding|CODING|LOC_Os09g10054.1|3|1) FN3942-S.SNP.9:5485113 chr09:005485113 0 W/5485113-5485113 FN3942-S SNP G -> A AC=2;AN=168;BQB=0.873598;DP=2585;DP4=1279,1167,14,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.69905e-18;MQSB=0.973676;RPB=0.947818;SGB=136.358;VDB=0.109477;EFF=INTRON(MODIFIER||||924|LOC_Os09g10054|protein_coding|CODING|LOC_Os09g10054.1|1|1) FN1547-S.SNP.9:5489195 chr09:005489195 0 W/5489195-5489195 FN1547-S Single Base Substitution G-T INTRON Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN856-S.SNP.9:5489209 chr09:005489209 0 W/5489209-5489209 FN856-S Single Base Substitution C-T INTRON HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2594-S.SNP.9:5489551 chr09:005489551 0 W/5489551-5489551 FN2594-S SNP A -> T AC=1;AN=198;BQB=0.996142;DP=4126;DP4=2044,1848,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.52536e-09;MQSB=0.971811;RPB=0.866511;SGB=6.15916;VDB=0.437013;EFF=INTRON(MODIFIER||||924|LOC_Os09g10054|protein_coding|CODING|LOC_Os09g10054.1|1|1) FN4150-S.SNP.9:5490047 chr09:005490047 0 W/5490047-5490047 FN4150-S SNP A -> T AC=2;AN=170;BQB=0.561391;DP=2371;DP4=1135,1158,20,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000421763;MQB=1.02282e-17;MQSB=0.985148;RPB=0.961254;SGB=154.496;VDB=0.0712466;EFF=INTRON(MODIFIER||||924|LOC_Os09g10054|protein_coding|CODING|LOC_Os09g10054.1|1|1) FN4150-S.SNP.9:5490495 chr09:005490495 0 W/5490495-5490495 FN4150-S SNP A -> T AC=2;AN=170;BQB=0.755205;DP=2605;DP4=1327,1179,18,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.47794e-15;MQSB=0.97906;RPB=0.974509;SGB=93.4031;VDB=0.107875;EFF=INTRON(MODIFIER||||924|LOC_Os09g10054|protein_coding|CODING|LOC_Os09g10054.1|1|1) FN4175-S.SNP.9:5493789 chr09:005493789 0 W/5493789-5493789 FN4175-S SNP T -> C AC=1;AN=170;BQB=0.846475;DP=3018;DP4=1397,1518,13,6;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0205434;MQB=0.0034927;MQSB=5.12384e-18;RPB=0.813752;SGB=32.0972;VDB=0.258983;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S508|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|3|1) FN-137.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN-137 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-183.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN-183 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN-76.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN-76 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1036-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN1036-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1338-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN1338-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1493-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN1493-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1643-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN1643-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1658-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN1658-S SNP G -> T AC=1;AN=188;BQB=0.403809;DP=2500;DP4=1311,1141,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0816;MQB=0.338629;MQSB=0.998905;RPB=0.8747;SGB=-13.3699;VDB=0.476625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN2118-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN2118-S SNP G -> T AC=2;AN=168;BQB=0.94339;DP=3264;DP4=1746,1446,25,16;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0802696;MQB=0.0601923;MQSB=0.0644394;RPB=0.207374;SGB=-50.8886;VDB=0.768521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN2283.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN2283 SNP G -> T AC=2;AN=192;BQB=0.723794;DP=4532;DP4=2108,2148,25,29;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.00970874;MQB=3.19735e-21;MQSB=0.673717;RPB=0.914807;SGB=6.67656;VDB=0.870823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN2431.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN2431 SNP G -> T AC=2;AN=200;BQB=0.982215;DP=4094;DP4=1986,1912,11,12;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.0107474;MQB=2.01522e-11;MQSB=0.703874;RPB=0.979949;SGB=72.7161;VDB=0.818587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN3449-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN3449-S SNP G -> T AC=2;AN=184;BQB=0.991428;DP=3151;DP4=1535,1515,16,19;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00983815;MQB=3.02576e-15;MQSB=0.944158;RPB=0.950502;SGB=152.744;VDB=0.784064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN3557-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN3557-S SNP G -> T AC=2;AN=188;BQB=0.967139;DP=3054;DP4=1516,1459,8,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.0117878;MQB=3.95133e-12;MQSB=0.999305;RPB=0.990877;SGB=117.128;VDB=0.34895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN3723-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN3723-S SNP G -> T AC=2;AN=190;BQB=0.990387;DP=2957;DP4=1473,1348,13,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.0104836;MQB=9.75679e-12;MQSB=0.699966;RPB=0.0162123;SGB=121.957;VDB=0.00583681;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN3834-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN3834-S SNP G -> T AC=2;AN=190;BQB=0.996878;DP=3048;DP4=1471,1445,14,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.0108268;MQB=9.40391e-12;MQSB=0.933163;RPB=0.701813;SGB=89.4087;VDB=0.381719;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN3864-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN3864-S SNP G -> T AC=2;AN=158;BQB=0.889429;DP=2670;DP4=1314,1226,21,19;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.011236;MQB=3.13773e-17;MQSB=0.972178;RPB=0.56936;SGB=169.412;VDB=0.501023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN4040-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN4040-S SNP G -> T AC=2;AN=168;BQB=0.999449;DP=2806;DP4=1363,1317,10,12;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0121169;MQB=1.39824e-08;MQSB=0.874062;RPB=0.744017;SGB=65.6253;VDB=0.217918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S10R|827|LOC_Os09g10080|protein_coding|CODING|LOC_Os09g10080.1|1|1) FN692-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN692-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN870-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN870-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN921-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN921-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN959-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN959-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN992-S.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 FN992-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. W591-4-1.SNP.9:5495450 chr09:005495450 0 W/5495450-5495450 W591-4-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN1512-S.SNP.9:5495925 chr09:005495925 0 W/5495925-5495925 FN1512-S Single Base Substitution A-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN711-S.SNP.9:5496117 chr09:005496117 0 W/5496117-5496117 FN711-S Single Base Substitution A-C INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN791-S.SNP.9:5496117 chr09:005496117 0 W/5496117-5496117 FN791-S Single Base Substitution A-C INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN3547-S.SNP.9:5496638 chr09:005496638 0 W/5496638-5496638 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.891527;DP=3350;DP4=1513,1779,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0949254;MQB=0.393633;MQSB=3.13769e-25;RPB=0.807579;SGB=25.3545;VDB=0.359729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.9:5497492 chr09:005497492 0 W/5497492-5497492 FN3839-S SNP T -> G AC=1;AN=190;BQB=0.972276;DP=2643;DP4=1507,1051,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=6.99373e-09;MQSB=8.59221e-05;RPB=0.588594;SGB=94.6341;VDB=0.195119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.9:5498540 chr09:005498540 0 W/5498540-5498540 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.988117;DP=3191;DP4=1379,1696,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0219367;MQB=0.123407;MQSB=0.000357267;RPB=0.983087;SGB=53.6492;VDB=0.129975;EFF=INTRON(MODIFIER||||95|LOC_Os09g10090|protein_coding|CODING|LOC_Os09g10090.1|1|1) FN2472.SNP.9:5499167 chr09:005499167 0 W/5499167-5499167 FN2472 SNP G -> A AC=1;AN=200;BQB=0.696299;DP=4601;DP4=2372,1993,6,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000652032;MQB=0.000365777;MQSB=0.0477761;RPB=0.531302;SGB=14.3054;VDB=0.55652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.9:5500821 chr09:005500821 0 W/5500821-5500821 FN3448-S SNP T -> C AC=2;AN=184;BQB=0.963632;DP=3667;DP4=1614,1850,9,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000272702;MQB=2.43795e-18;MQSB=0.923893;RPB=0.980775;SGB=-7.93076;VDB=0.70909;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.9:5502247 chr09:005502247 0 W/5502247-5502247 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.985664;DP=2352;DP4=1167,1077,37,8;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00935374;MQB=1.35565e-23;MQSB=0.0400904;RPB=1.29743e-05;SGB=-365.513;VDB=0.569597;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.9:5505784 chr09:005505784 0 W/5505784-5505784 FN510-S Single Base Substitution C-T INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1292-S.SNP.9:5506226 chr09:005506226 0 W/5506226-5506226 FN1292-S Single Base Substitution C-G INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2445.SNP.9:5527637 chr09:005527637 0 W/5527637-5527637 FN2445 SNP C -> T AC=1;AN=200;BQB=0.736124;DP=5029;DP4=2330,2377,5,9;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.308411;MQB=0.0694366;MQSB=0;RPB=0.992639;SGB=40.2696;VDB=0.733659;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.9:5529273 chr09:005529273 0 W/5529273-5529273 FN504-S Single Base Substitution G-T INTRON HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3707-S.SNP.9:5529322 chr09:005529322 0 W/5529322-5529322 FN3707-S SNP T -> A AC=1;AN=190;BQB=0.936158;DP=2817;DP4=1421,1287,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51221e-08;MQSB=0.999993;RPB=0.854714;SGB=62.7569;VDB=0.971206;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V275D|1507|LOC_Os09g10170|protein_coding|CODING|LOC_Os09g10170.1|4|1) FN1760-S.SNP.9:5531776 chr09:005531776 0 W/5531776-5531776 FN1760-S SNP G -> A AC=1;AN=188;BQB=0.775447;DP=3391;DP4=1724,1614,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22191e-11;MQSB=0.941996;RPB=0.637634;SGB=36.2493;VDB=0.482629;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q950|1507|LOC_Os09g10170|protein_coding|CODING|LOC_Os09g10170.1|7|1) FN3915-S.SNP.9:5534498 chr09:005534498 0 W/5534498-5534498 FN3915-S SNP G -> T AC=1;AN=158;BQB=0.877043;DP=2802;DP4=1555,1128,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.58143e-10;MQSB=0.791577;RPB=0.701122;SGB=64.5449;VDB=0.12402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.9:5534688 chr09:005534688 0 W/5534688-5534688 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.672381;DP=4466;DP4=1944,2283,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82685e-08;MQSB=0.845498;RPB=0.458581;SGB=31.9395;VDB=0.984753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.9:5536509 chr09:005536509 0 W/5536509-5536509 FN2134-S SNP A -> T AC=2;AN=168;BQB=0.988419;DP=3102;DP4=1252,1765,21,30;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.19668e-30;MQSB=0.578308;RPB=0.154079;SGB=220.544;VDB=0.245046;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.9:5540581 chr09:005540581 0 W/5540581-5540581 W463-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN860-S.SNP.9:5541739 chr09:005541739 0 W/5541739-5541739 FN860-S Single Base Substitution G-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN2263-S.SNP.9:5558133 chr09:005558133 0 W/5558133-5558133 FN2263-S SNP A -> T AC=1;AN=190;BQB=0.649739;DP=3464;DP4=1513,1474,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00288684;MQB=0.00023556;MQSB=0.172778;RPB=0.896047;SGB=-5.4677;VDB=0.445878;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.9:5558327 chr09:005558327 0 W/5558327-5558327 FN518-S Single Base Substitution G-A INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN518-S.SNP.9:5558328 chr09:005558328 0 W/5558328-5558328 FN518-S Single Base Substitution G-A INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN1483-S.SNP.9:5564453 chr09:005564453 0 W/5564453-5564453 FN1483-S Single Base Substitution A-G INTRON Homo SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2555-S.SNP.9:5565326 chr09:005565326 0 W/5565326-5565326 FN2555-S SNP T -> C AC=1;AN=198;BQB=0.861564;DP=3875;DP4=1639,1900,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00490323;MQB=0.000413396;MQSB=0.213303;RPB=0.60939;SGB=-13.2407;VDB=0.249373;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A1062|1534|LOC_Os09g10220|protein_coding|CODING|LOC_Os09g10220.1|7|1) FN4043-S.SNP.9:5567642 chr09:005567642 0 W/5567642-5567642 FN4043-S SNP G -> C AC=1;AN=168;BQB=0.988066;DP=1728;DP4=808,835,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.61252e-08;MQSB=0.615467;RPB=0.912309;SGB=45.0404;VDB=0.177717;EFF=INTRON(MODIFIER||||1534|LOC_Os09g10220|protein_coding|CODING|LOC_Os09g10220.1|4|1) FN-238.SNP.9:5575273 chr09:005575273 0 W/5575273-5575273 FN-238 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3808-S.SNP.9:5576128 chr09:005576128 0 W/5576128-5576128 FN3808-S SNP T -> C AC=1;AN=190;BQB=0.767215;DP=2754;DP4=1412,1224,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00944081;MQB=0.805274;MQSB=0.981356;RPB=0.962076;SGB=4.11112;VDB=0.936819;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.9:5576186 chr09:005576186 0 W/5576186-5576186 FN1335-S Single Base Substitution T-C INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2551-S.SNP.9:5576417 chr09:005576417 0 W/5576417-5576417 FN2551-S SNP T -> A AC=1;AN=198;BQB=0.420163;DP=3960;DP4=1901,1835,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00429293;MQB=2.08751e-15;MQSB=0.000164025;RPB=0.0354674;SGB=94.0758;VDB=0.450969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.9:5577660 chr09:005577660 0 W/5577660-5577660 FN2299 SNP T -> C AC=1;AN=192;BQB=0.996598;DP=5186;DP4=2481,2403,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0050135;MQB=0.000211293;MQSB=0.709847;RPB=0.95011;SGB=25.5227;VDB=0.929402;EFF=INTRON(MODIFIER||||1811|LOC_Os09g10240|protein_coding|CODING|LOC_Os09g10240.1|3|1) FN_N1-169-1.SNP.9:5580244 chr09:005580244 0 W/5580244-5580244 FN_N1-169-1 Single Base Substitution T-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN702-S.SNP.9:5580347 chr09:005580347 0 W/5580347-5580347 FN702-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g10240 retrotransposon protein, putative, unclassified, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2536-S.SNP.9:5587032 chr09:005587032 0 W/5587032-5587032 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.455494;DP=4258;DP4=2119,1805,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234852;MQB=6.06049e-08;MQSB=0.942066;RPB=0.936517;SGB=40.149;VDB=0.347979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.9:5593211 chr09:005593211 0 W/5593211-5593211 FN2200-S SNP A -> G AC=2;AN=190;BQB=0.712894;DP=4895;DP4=2398,2257,11,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.2181e-19;MQSB=0.966992;RPB=0.99324;SGB=140.173;VDB=0.8079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.9:5594893 chr09:005594893 0 W/5594893-5594893 FN3808-S SNP C -> A AC=1;AN=190;BQB=0.746346;DP=3312;DP4=1869,1316,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000224128;MQSB=0.833354;RPB=0.836582;SGB=71.8647;VDB=0.81429;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D138Y|172|LOC_Os09g10270|protein_coding|CODING|LOC_Os09g10270.1|1|1) FN2360.SNP.9:5597603 chr09:005597603 0 W/5597603-5597603 FN2360 SNP T -> A AC=2;AN=192;BQB=0.706086;DP=5405;DP4=2536,2482,24,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.28764e-24;MQSB=0.934677;RPB=0.0981475;SGB=48.0279;VDB=0.469548;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.9:5599307 chr09:005599307 0 W/5599307-5599307 FN3971-S SNP C -> T AC=2;AN=168;BQB=0.98873;DP=2400;DP4=1174,1126,9,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.10263e-07;MQSB=0.941289;RPB=0.769921;SGB=61.0344;VDB=0.759468;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A24|67|LOC_Os09g10274|protein_coding|CODING|LOC_Os09g10274.1|2|1) FN2395.SNP.9:5600346 chr09:005600346 0 W/5600346-5600346 FN2395 SNP G -> A AC=2;AN=200;BQB=0.214297;DP=4458;DP4=2019,1966,23,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000224316;MQB=3.95267e-10;MQSB=2.79269e-05;RPB=0.284648;SGB=-116.833;VDB=0.0545296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.9:5602623 chr09:005602623 0 W/5602623-5602623 FN3115-S SNP T -> G AC=1;AN=184;BQB=0.989641;DP=3579;DP4=1444,1942,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.39101e-11;MQSB=0.997377;RPB=0.991476;SGB=38.4058;VDB=0.677523;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.9:5606483 chr09:005606483 0 W/5606483-5606483 FN4204-S SNP A -> G AC=2;AN=170;BQB=0.527051;DP=2264;DP4=1066,1121,8,15;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0.00132509;MQB=1.60709e-07;MQSB=0.934001;RPB=0.999825;SGB=69.3045;VDB=0.980289;EFF=INTRON(MODIFIER||||383|LOC_Os09g10290|protein_coding|CODING|LOC_Os09g10290.1|1|1) FN_798-4-2.SNP.9:5608116 chr09:005608116 0 W/5608116-5608116 FN_798-4-2 Single Base Substitution C-T HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN1268-S.SNP.9:5614901 chr09:005614901 0 W/5614901-5614901 FN1268-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2345.SNP.9:5616437 chr09:005616437 0 W/5616437-5616437 FN2345 SNP A -> G AC=2;AN=192;BQB=0.566138;DP=4528;DP4=2392,1788,31,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.6469e-31;MQSB=0.958672;RPB=0.942688;SGB=134.052;VDB=0.0759221;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.9:5617905 chr09:005617905 0 W/5617905-5617905 FN4204-S SNP G -> A AC=2;AN=170;BQB=0.953703;DP=2569;DP4=1129,1341,12,28;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.56937e-24;MQSB=0.975359;RPB=0.859037;SGB=127.83;VDB=0.968332;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.9:5618349 chr09:005618349 0 W/5618349-5618349 FN1304-S Single Base Substitution A-G INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN1549-S.SNP.9:5620683 chr09:005620683 0 W/5620683-5620683 FN1549-S Single Base Substitution A-C INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2596-S.SNP.9:5621028 chr09:005621028 0 W/5621028-5621028 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.924084;DP=4277;DP4=1827,2242,4,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.07109e-05;MQSB=0.811065;RPB=0.784446;SGB=22.1736;VDB=0.813064;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L167|207|LOC_Os09g10310|protein_coding|CODING|LOC_Os09g10310.1|1|1) FN1327-S.SNP.9:5621156 chr09:005621156 0 W/5621156-5621156 FN1327-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g10310 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3796-S.SNP.9:5622750 chr09:005622750 0 W/5622750-5622750 FN3796-S SNP G -> T AC=2;AN=190;BQB=0.843589;DP=2517;DP4=1139,1249,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.02807e-15;MQSB=0.983186;RPB=0.953813;SGB=75.1932;VDB=0.0872135;EFF=INTERGENIC(MODIFIER||||||||||1) FN-249.SNP.9:5624693 chr09:005624693 0 W/5624693-5624693 FN-249 Single Base Substitution C-A INTERGENIC HET SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN2275-S.SNP.9:5627103 chr09:005627103 0 W/5627103-5627103 FN2275-S SNP T -> A AC=1;AN=190;BQB=0.897678;DP=4903;DP4=2402,2130,26,35;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01025e-34;MQSB=0.969811;RPB=0.995843;SGB=206.687;VDB=0.689975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.9:5627407 chr09:005627407 0 W/5627407-5627407 FN3699-S SNP C -> A AC=1;AN=190;BQB=0.884598;DP=3052;DP4=1418,1526,10,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03309e-19;MQSB=0.983757;RPB=0.0386643;SGB=100.07;VDB=0.0958933;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.9:5634826 chr09:005634826 0 W/5634826-5634826 FN758-S Single Base Substitution T-A INTERGENIC HOMO SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2241-S.SNP.9:5639885 chr09:005639885 0 W/5639885-5639885 FN2241-S SNP C -> A AC=1;AN=190;BQB=0.897509;DP=4986;DP4=2542,2131,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27309e-12;MQSB=0.772629;RPB=0.899423;SGB=46.6446;VDB=0.49323;EFF=INTERGENIC(MODIFIER||||||||||1) FN4144-S.SNP.9:5639964 chr09:005639964 0 W/5639964-5639964 FN4144-S SNP C -> T AC=1;AN=170;BQB=0.959257;DP=2403;DP4=1144,1206,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.67388e-09;MQSB=0.98489;RPB=0.69503;SGB=65.6427;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.9:5640990 chr09:005640990 0 W/5640990-5640990 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.998806;DP=4523;DP4=2141,2100,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85387e-15;MQSB=0.998503;RPB=0.756273;SGB=28.752;VDB=0.519225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.9:5642736 chr09:005642736 0 W/5642736-5642736 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.128999;DP=4965;DP4=2404,2191,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28148e-16;MQSB=0.997949;RPB=0.930049;SGB=90.7419;VDB=0.589192;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.9:5658105 chr09:005658105 0 W/5658105-5658105 FN229-S Single Base Substitution C-A INTRON HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2711-S.SNP.9:5658821 chr09:005658821 0 W/5658821-5658821 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.900933;DP=4578;DP4=2216,2153,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26078e-10;MQSB=0.993263;RPB=0.801287;SGB=54.6902;VDB=0.18785;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P97|180|LOC_Os09g10360|protein_coding|CODING|LOC_Os09g10360.1|2|1) FN-308.SNP.9:5658911 chr09:005658911 0 W/5658911-5658911 FN-308 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN3780-S.SNP.9:5664825 chr09:005664825 0 W/5664825-5664825 FN3780-S SNP T -> A AC=1;AN=190;BQB=0.554942;DP=2972;DP4=1368,1448,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.026245;MQB=0.0754611;MQSB=0.154541;RPB=0.551804;SGB=46.7622;VDB=0.91184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.9:5664949 chr09:005664949 0 W/5664949-5664949 FN2493 SNP T -> C AC=1;AN=200;BQB=0.402359;DP=5120;DP4=2503,2247,19,14;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.264453;MQB=0.096655;MQSB=0.000122362;RPB=0.00333565;SGB=108.768;VDB=0.285676;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.9:5670778 chr09:005670778 0 W/5670778-5670778 FN2218-S SNP G -> A AC=2;AN=190;BQB=0.957458;DP=4956;DP4=2476,2136,36,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.42933e-35;MQSB=0.969027;RPB=0.723751;SGB=156.461;VDB=0.634361;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.9:5675838 chr09:005675838 0 W/5675838-5675838 FN4165-S SNP T -> A AC=1;AN=170;BQB=0.889298;DP=2390;DP4=1096,1221,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000402821;MQSB=0.220566;RPB=0.807356;SGB=10.1134;VDB=0.362972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.9:5678415 chr09:005678415 0 W/5678415-5678415 FN2354 SNP A -> T AC=1;AN=192;BQB=0.796273;DP=4727;DP4=2087,2346,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23625e-08;MQSB=0.604087;RPB=0.404429;SGB=-15.333;VDB=0.554145;EFF=INTRON(MODIFIER||||104|LOC_Os09g10370|protein_coding|CODING|LOC_Os09g10370.1|2|1) FN673-S.SNP.9:5679972 chr09:005679972 0 W/5679972-5679972 FN673-S Single Base Substitution C-T INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1509-S.SNP.9:5681261 chr09:005681261 0 W/5681261-5681261 FN1509-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g10380 transposon protein, putative, unclassified, expressed SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN3838-S.SNP.9:5682052 chr09:005682052 0 W/5682052-5682052 FN3838-S SNP T -> C AC=1;AN=190;BQB=0.905681;DP=2042;DP4=895,985,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000143489;MQSB=0.952224;RPB=0.930416;SGB=14.7784;VDB=0.975486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.9:5682872 chr09:005682872 0 W/5682872-5682872 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.127837;DP=3472;DP4=1908,1505,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000288018;MQB=3.79997e-06;MQSB=0.952132;RPB=0.530396;SGB=-11.926;VDB=0.130065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.9:5686474 chr09:005686474 0 W/5686474-5686474 FN1426-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g10390 retrotransposon protein, putative, unclassified, expressed SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3795-S.SNP.9:5690770 chr09:005690770 0 W/5690770-5690770 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.750516;DP=2908;DP4=1503,1329,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00447043;MQB=7.63861e-06;MQSB=0.983117;RPB=0.165041;SGB=49.0954;VDB=0.440289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3795-S.SNP.9:5690772 chr09:005690772 0 W/5690772-5690772 FN3795-S SNP G -> A AC=1;AN=190;BQB=0.777245;DP=2910;DP4=1512,1317,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00412371;MQB=6.73825e-06;MQSB=0.995148;RPB=0.119608;SGB=49.0954;VDB=0.416494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.9:5702332 chr09:005702332 0 W/5702332-5702332 FN2385 SNP T -> C AC=2;AN=192;BQB=0.978436;DP=5397;DP4=2516,2550,30,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.33588e-36;MQSB=0.997725;RPB=0.949633;SGB=207.304;VDB=0.145003;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.9:5703687 chr09:005703687 0 W/5703687-5703687 FN3427-S SNP A -> G AC=1;AN=184;BQB=0.915984;DP=2694;DP4=1194,1392,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.23071e-09;MQSB=0.843355;RPB=0.700608;SGB=62.3078;VDB=0.53426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.9:5705191 chr09:005705191 0 W/5705191-5705191 FN2542-S SNP T -> C AC=2;AN=196;BQB=0.981591;DP=4171;DP4=1983,1970,24,17;HOB=0.0201999;ICB=0.494951;MQ=45;MQ0F=0.00455526;MQB=2.32071e-06;MQSB=1.06277e-13;RPB=0.983523;SGB=137.217;VDB=0.978601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.9:5705343 chr09:005705343 0 W/5705343-5705343 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3288-S.SNP.9:5708908 chr09:005708908 0 W/5708908-5708908 FN3288-S SNP C -> T AC=1;AN=184;BQB=0.49883;DP=3540;DP4=1715,1655,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000282486;MQB=1.26291e-05;MQSB=0.182799;RPB=0.796518;SGB=46.3132;VDB=0.819915;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN-124 Single Base Substitution G-C INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN-345.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN-345 Single Base Substitution G-C INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN-71 Single Base Substitution G-C INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN1093-S Single Base Substitution G-C INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1158-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN1158-S Single Base Substitution G-C INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2486.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN2486 SNP G -> C AC=2;AN=200;BQB=0.874911;DP=4801;DP4=2147,2285,27,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56149e-26;MQSB=0.999143;RPB=0.999883;SGB=123.271;VDB=0.108367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN2662-S SNP G -> C AC=1;AN=200;BQB=0.709104;DP=5074;DP4=2429,2386,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.79311e-16;MQSB=0.999659;RPB=0.888509;SGB=87.1368;VDB=0.807555;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN3345-S SNP G -> C AC=2;AN=184;BQB=0.995385;DP=3106;DP4=1600,1350,18,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.92628e-16;MQSB=0.919411;RPB=0.931711;SGB=99.14;VDB=0.465903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN3665-S SNP G -> C AC=1;AN=190;BQB=0.878391;DP=2780;DP4=1452,1163,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20914e-16;MQSB=0.9997;RPB=0.0257489;SGB=92.9626;VDB=0.49818;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN4063-S SNP G -> C AC=1;AN=168;BQB=0.944727;DP=2579;DP4=1433,1012,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.62652e-06;MQSB=0.999988;RPB=0.909812;SGB=21.0249;VDB=0.159195;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN4095-S SNP G -> C AC=2;AN=182;BQB=0.544077;DP=2855;DP4=1540,1204,18,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.42789e-14;MQSB=0.94453;RPB=0.54764;SGB=88.2906;VDB=0.507391;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN627-S Single Base Substitution G-C INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN_812-4-1.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 FN_812-4-1 Single Base Substitution G-C Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. W453-3-1.SNP.9:5709653 chr09:005709653 0 W/5709653-5709653 W453-3-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN548-S.SNP.9:5709940 chr09:005709940 0 W/5709940-5709940 FN548-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN_N1-130-1.SNP.9:5711925 chr09:005711925 0 W/5711925-5711925 FN_N1-130-1 Single Base Substitution C-T HET LOC_Os09g10450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1252-S.SNP.9:5719991 chr09:005719991 0 W/5719991-5719991 FN1252-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN630-S.SNP.9:5725072 chr09:005725072 0 W/5725072-5725072 FN630-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g10480 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN3343-S.SNP.9:5728720 chr09:005728720 0 W/5728720-5728720 FN3343-S SNP C -> G AC=1;AN=184;BQB=0.70933;DP=1692;DP4=744,693,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00827423;MQB=0.112066;MQSB=0.00844028;RPB=0.689856;SGB=28.7043;VDB=0.274778;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.9:5730894 chr09:005730894 0 W/5730894-5730894 FN3384-S SNP G -> A AC=1;AN=184;BQB=0.502605;DP=3117;DP4=1276,1747,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05341e-07;MQSB=0.0115843;RPB=0.998334;SGB=30.8405;VDB=0.662959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.9:5731802 chr09:005731802 0 W/5731802-5731802 FN1568-S Single Base Substitution G-T INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN883-S.SNP.9:5738713 chr09:005738713 0 W/5738713-5738713 FN883-S Single Base Substitution A-C INTERGENIC HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN2105-S.SNP.9:5745068 chr09:005745068 0 W/5745068-5745068 FN2105-S SNP A -> G AC=2;AN=168;BQB=0.99525;DP=4284;DP4=2022,2214,20,18;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0.0128385;MQB=1.04796e-05;MQSB=6.4048e-06;RPB=0.261588;SGB=35.6687;VDB=0.358906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.9:5747252 chr09:005747252 0 W/5747252-5747252 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.59152;DP=4206;DP4=2009,2089,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00737042;MQB=5.52302e-07;MQSB=2.677e-15;RPB=0.491127;SGB=67.8739;VDB=0.858475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.9:5747435 chr09:005747435 0 W/5747435-5747435 FN3376-S SNP G -> A AC=1;AN=184;BQB=0.722139;DP=3561;DP4=1785,1529,15,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00084246;MQB=1.15813e-12;MQSB=2.09479e-05;RPB=0.855319;SGB=23.542;VDB=0.401005;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.9:5754444 chr09:005754444 0 W/5754444-5754444 FN3370-S SNP G -> A AC=1;AN=184;BQB=0.667257;DP=3059;DP4=1385,1590,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.033998;MQB=0.312831;MQSB=1.06993e-10;RPB=0.494486;SGB=75.8731;VDB=0.798852;EFF=INTRON(MODIFIER||||1561|LOC_Os09g10540|protein_coding|CODING|LOC_Os09g10540.1|2|1) FN2779-S.SNP.9:5756671 chr09:005756671 0 W/5756671-5756671 FN2779-S SNP T -> A AC=1;AN=198;BQB=0.418376;DP=3826;DP4=2096,1357,21,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00235233;MQB=6.63065e-12;MQSB=0.94788;RPB=0.99838;SGB=65.676;VDB=0.304568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.9:5757000 chr09:005757000 0 W/5757000-5757000 FN2190-S SNP T -> C AC=1;AN=190;BQB=0.885129;DP=4494;DP4=2361,1769,22,10;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0137962;MQB=0.999947;MQSB=0.0747713;RPB=0.00964044;SGB=30.527;VDB=0.0964177;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.9:5763218 chr09:005763218 0 W/5763218-5763218 FN2614-S SNP T -> C AC=2;AN=198;BQB=0.999334;DP=4185;DP4=1929,2035,18,15;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.000477897;MQB=9.10047e-10;MQSB=6.50882e-22;RPB=0.712471;SGB=146.046;VDB=0.833514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.9:5763218 chr09:005763218 0 W/5763218-5763218 FN3804-S SNP T -> C AC=2;AN=190;BQB=0.960738;DP=2877;DP4=1398,1278,28,29;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000695169;MQB=8.1484e-27;MQSB=1.06849e-06;RPB=0.958044;SGB=248.477;VDB=0.871911;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.9:5763418 chr09:005763418 0 W/5763418-5763418 FN-262 Single Base Substitution G-A INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2354.SNP.9:5769255 chr09:005769255 0 W/5769255-5769255 FN2354 SNP T -> G AC=1;AN=192;BQB=0.810776;DP=2992;DP4=1494,1052,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00467914;MQB=0.000264012;MQSB=1.30472e-07;RPB=0.975842;SGB=-54.4513;VDB=0.162548;EFF=INTRON(MODIFIER||||175|LOC_Os09g10570|protein_coding|CODING|LOC_Os09g10570.1|2|1) FN2652-S.SNP.9:5770263 chr09:005770263 0 W/5770263-5770263 FN2652-S SNP C -> A AC=1;AN=200;BQB=0.978119;DP=5167;DP4=2607,2253,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30844e-11;MQSB=0.999609;RPB=0.179409;SGB=42.5108;VDB=0.16778;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.9:5770314 chr09:005770314 0 W/5770314-5770314 FN737-S Single Base Substitution T-A INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN2429.SNP.9:5772515 chr09:005772515 0 W/5772515-5772515 FN2429 SNP G -> T AC=1;AN=200;BQB=0.548678;DP=3845;DP4=1819,1745,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69982e-07;MQSB=0.876263;RPB=0.871323;SGB=45.0543;VDB=0.144698;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G124|131|LOC_Os09g10580|protein_coding|CODING|LOC_Os09g10580.1|3|1) FN-194.SNP.9:5773139 chr09:005773139 0 W/5773139-5773139 FN-194 Single Base Substitution A-C INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2579-S.SNP.9:5774228 chr09:005774228 0 W/5774228-5774228 FN2579-S SNP C -> T AC=1;AN=198;BQB=0.132722;DP=4270;DP4=1780,2141,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.31747e-09;MQSB=0.976251;RPB=0.40447;SGB=54.5295;VDB=0.3436;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.9:5790559 chr09:005790559 0 W/5790559-5790559 FN907-S Single Base Substitution T-C INTERGENIC HOMO SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3381-S.SNP.9:5790894 chr09:005790894 0 W/5790894-5790894 FN3381-S SNP C -> T AC=1;AN=184;BQB=0.943094;DP=2474;DP4=1127,1274,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01161e-05;MQSB=0.961057;RPB=0.88913;SGB=10.6662;VDB=0.847464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.9:5790927 chr09:005790927 0 W/5790927-5790927 FN1715-S SNP G -> A AC=1;AN=188;BQB=0.0878301;DP=3848;DP4=1664,2120,17,23;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.74992e-15;MQSB=0.99719;RPB=0.598885;SGB=-224.65;VDB=0.907023;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.9:5791823 chr09:005791823 0 W/5791823-5791823 FN-332 Single Base Substitution C-T INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN523-S.SNP.9:5794769 chr09:005794769 0 W/5794769-5794769 FN523-S Single Base Substitution C-G INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.9:5794769 chr09:005794769 0 W/5794769-5794769 FN532-S Single Base Substitution C-G INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN4100-S.SNP.9:5798614 chr09:005798614 0 W/5798614-5798614 FN4100-S SNP G -> A AC=2;AN=182;BQB=0.296195;DP=2735;DP4=1196,1430,21,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.9402e-16;MQSB=0.952701;RPB=0.164391;SGB=161.394;VDB=0.00524395;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.9:5802068 chr09:005802068 0 W/5802068-5802068 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.932918;DP=2264;DP4=1185,1025,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000883392;MQB=3.73467e-06;MQSB=0.499788;RPB=0.979825;SGB=48.7425;VDB=0.0475124;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I1009|1524|LOC_Os09g10650|protein_coding|CODING|LOC_Os09g10650.1|10|1) FN1410-S.SNP.9:5808862 chr09:005808862 0 W/5808862-5808862 FN1410-S Single Base Substitution T-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2436.SNP.9:5810060 chr09:005810060 0 W/5810060-5810060 FN2436 SNP T -> G AC=1;AN=200;BQB=0.92091;DP=4938;DP4=2366,2195,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7895e-13;MQSB=0.883293;RPB=0.256585;SGB=45.1159;VDB=0.35163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.9:5814560 chr09:005814560 0 W/5814560-5814560 FN3981-S SNP C -> T AC=2;AN=168;BQB=0.999426;DP=2539;DP4=1213,1208,10,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.38893e-11;MQSB=0.8849;RPB=0.777585;SGB=87.6193;VDB=0.681928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1741-S.SNP.9:5820298 chr09:005820298 0 W/5820298-5820298 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.439376;DP=2917;DP4=1076,1805,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1668e-06;MQSB=0.891196;RPB=0.905696;SGB=7.0815;VDB=0.332739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.9:5822921 chr09:005822921 0 W/5822921-5822921 FN1020-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1545-S.SNP.9:5823390 chr09:005823390 0 W/5823390-5823390 FN1545-S Single Base Substitution G-A INTRON HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN-152.SNP.9:5824179 chr09:005824179 0 W/5824179-5824179 FN-152 Single Base Substitution G-A STOP_GAINED HET LOC_Os09g10680 hypothetical protein SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN391-S.SNP.9:5827168 chr09:005827168 0 W/5827168-5827168 FN391-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1448-S.SNP.9:5832400 chr09:005832400 0 W/5832400-5832400 FN1448-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1336-S.SNP.9:5836589 chr09:005836589 0 W/5836589-5836589 FN1336-S Single Base Substitution T-G INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2790-S.SNP.9:5839359 chr09:005839359 0 W/5839359-5839359 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.964862;DP=4386;DP4=2172,1985,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15743e-10;MQSB=0.982139;RPB=0.688278;SGB=26.7492;VDB=0.801528;EFF=INTRON(MODIFIER||||409|LOC_Os09g10710|protein_coding|CODING|LOC_Os09g10710.1|7|1),INTRON(MODIFIER||||409|LOC_Os09g10710|protein_coding|CODING|LOC_Os09g10710.2|7|1),INTRON(MODIFIER||||373|LOC_Os09g10710|protein_coding|CODING|LOC_Os09g10710.3|7|1) FN-116.SNP.9:5844562 chr09:005844562 0 W/5844562-5844562 FN-116 Single Base Substitution T-A INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN828-S.SNP.9:5853697 chr09:005853697 0 W/5853697-5853697 FN828-S Single Base Substitution G-A INTERGENIC HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN-207.SNP.9:5858391 chr09:005858391 0 W/5858391-5858391 FN-207 Single Base Substitution G-C INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1396-S.SNP.9:5862020 chr09:005862020 0 W/5862020-5862020 FN1396-S Single Base Substitution G-A INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN460-S.SNP.9:5862179 chr09:005862179 0 W/5862179-5862179 FN460-S Single Base Substitution C-T INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2220-S.SNP.9:5869345 chr09:005869345 0 W/5869345-5869345 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.801249;DP=5011;DP4=2398,2238,18,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.63717e-16;MQSB=0.999895;RPB=0.678726;SGB=89.4087;VDB=0.522234;EFF=INTRON(MODIFIER||||239|LOC_Os09g10750|protein_coding|CODING|LOC_Os09g10750.1|4|1) FN493-S.SNP.9:5872743 chr09:005872743 0 W/5872743-5872743 FN493-S Single Base Substitution A-T INTRON HOMO SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. W706-3-1.SNP.9:5877426 chr09:005877426 0 W/5877426-5877426 W706-3-1 Single Base Substitution C-T INTRON HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN3400-S.SNP.9:5885753 chr09:005885753 0 W/5885753-5885753 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.985289;DP=2994;DP4=1533,1332,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75349e-08;MQSB=0.997142;RPB=0.489304;SGB=62.3078;VDB=0.0766038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1618-S.SNP.9:5886411 chr09:005886411 0 W/5886411-5886411 FN1618-S Single Base Substitution C-A INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN-406.SNP.9:5887951 chr09:005887951 0 W/5887951-5887951 FN-406 Single Base Substitution T-C INTERGENIC HET SNo: 398, Mutant_ID: FN-406, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN434-S.SNP.9:5888371 chr09:005888371 0 W/5888371-5888371 FN434-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g10790 retrotransposon protein, putative, unclassified, expressed SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN3698-S.SNP.9:5892808 chr09:005892808 0 W/5892808-5892808 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.934945;DP=2678;DP4=1245,1355,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19796e-05;MQSB=0.993279;RPB=0.964043;SGB=30.8803;VDB=0.289496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.9:5893682 chr09:005893682 0 W/5893682-5893682 FN3495-S SNP C -> A AC=1;AN=188;BQB=0.835251;DP=2970;DP4=1466,1395,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.45913e-09;MQSB=0.989456;RPB=0.996945;SGB=53.7007;VDB=0.521408;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.9:5893752 chr09:005893752 0 W/5893752-5893752 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.990399;DP=4035;DP4=1950,1844,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.17793e-05;MQSB=0.65518;RPB=0.590316;SGB=35.7638;VDB=0.431879;EFF=INTERGENIC(MODIFIER||||||||||1) FN918-S.SNP.9:5893905 chr09:005893905 0 W/5893905-5893905 FN918-S Single Base Substitution G-T INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3656-S.SNP.9:5896625 chr09:005896625 0 W/5896625-5896625 FN3656-S SNP G -> T AC=2;AN=190;BQB=0.691747;DP=2998;DP4=1327,1484,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78852e-20;MQSB=0.952756;RPB=0.475051;SGB=67.0756;VDB=0.176963;EFF=INTRON(MODIFIER||||102|LOC_Os09g10800|protein_coding|CODING|LOC_Os09g10800.1|1|1) FN3656-S.SNP.9:5896630 chr09:005896630 0 W/5896630-5896630 FN3656-S SNP A -> C AC=2;AN=190;BQB=0.215493;DP=3006;DP4=1369,1514,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.50867e-18;MQSB=0.986359;RPB=0.209315;SGB=100.07;VDB=0.204587;EFF=INTRON(MODIFIER||||102|LOC_Os09g10800|protein_coding|CODING|LOC_Os09g10800.1|1|1) FN835-S.SNP.9:5897478 chr09:005897478 0 W/5897478-5897478 FN835-S Single Base Substitution G-A INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2461.SNP.9:5900494 chr09:005900494 0 W/5900494-5900494 FN2461 SNP G -> A AC=1;AN=200;BQB=0.835384;DP=4592;DP4=1957,2288,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.80078e-16;MQSB=0.808301;RPB=0.791938;SGB=33.5675;VDB=0.354495;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.9:5902495 chr09:005902495 0 W/5902495-5902495 W7-1-1 Single Base Substitution G-A INTRON HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN628-S.SNP.9:5916052 chr09:005916052 0 W/5916052-5916052 FN628-S Single Base Substitution C-T INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1610-S.SNP.9:5918410 chr09:005918410 0 W/5918410-5918410 FN1610-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN4043-S.SNP.9:5925545 chr09:005925545 0 W/5925545-5925545 FN4043-S SNP C -> A AC=1;AN=168;BQB=0.545839;DP=2351;DP4=1140,1099,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.98814e-09;MQSB=0.980284;RPB=0.881943;SGB=55.3328;VDB=0.944366;EFF=INTRON(MODIFIER||||467|LOC_Os09g10840|protein_coding|CODING|LOC_Os09g10840.1|9|1),INTRON(MODIFIER||||475|LOC_Os09g10840|protein_coding|CODING|LOC_Os09g10840.2|9|1) FN918-S.SNP.9:5928356 chr09:005928356 0 W/5928356-5928356 FN918-S Single Base Substitution A-G INTRON HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3438-S.SNP.9:5931126 chr09:005931126 0 W/5931126-5931126 FN3438-S SNP T -> A AC=1;AN=184;BQB=0.790865;DP=2320;DP4=992,1145,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.59764e-05;MQSB=0.991415;RPB=0.877373;SGB=44.2207;VDB=0.255089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.9:5935634 chr09:005935634 0 W/5935634-5935634 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.328186;DP=3994;DP4=1971,1803,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.89829e-13;MQSB=0.959012;RPB=0.983057;SGB=-9.07482;VDB=0.910405;EFF=INTRON(MODIFIER||||235|LOC_Os09g10850|protein_coding|CODING|LOC_Os09g10850.1|9|1) FN-103.SNP.9:5938947 chr09:005938947 0 W/5938947-5938947 FN-103 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2312.SNP.9:5940176 chr09:005940176 0 W/5940176-5940176 FN2312 SNP A -> T AC=2;AN=192;BQB=0.715432;DP=4842;DP4=2126,2419,19,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.86875e-25;MQSB=0.783997;RPB=0.962958;SGB=146.71;VDB=0.150472;EFF=INTRON(MODIFIER||||235|LOC_Os09g10850|protein_coding|CODING|LOC_Os09g10850.1|1|1) FN2312.SNP.9:5940178 chr09:005940178 0 W/5940178-5940178 FN2312 SNP A -> T AC=2;AN=192;BQB=0.266544;DP=4841;DP4=2106,2369,21,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.98784e-24;MQSB=0.870606;RPB=0.651447;SGB=146.71;VDB=0.242649;EFF=INTRON(MODIFIER||||235|LOC_Os09g10850|protein_coding|CODING|LOC_Os09g10850.1|1|1) FN744-S.SNP.9:5967139 chr09:005967139 0 W/5967139-5967139 FN744-S Single Base Substitution C-T INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3849-S.SNP.9:5967943 chr09:005967943 0 W/5967943-5967943 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.899662;DP=2315;DP4=1099,1135,6,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000431965;MQB=0.000260823;MQSB=0.960894;RPB=0.321222;SGB=29.5899;VDB=0.220756;EFF=INTERGENIC(MODIFIER||||||||||1) FN1383-S.SNP.9:5972357 chr09:005972357 0 W/5972357-5972357 FN1383-S Single Base Substitution G-A INTRON HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2199-S.SNP.9:5973540 chr09:005973540 0 W/5973540-5973540 FN2199-S SNP A -> G AC=1;AN=190;BQB=0.97789;DP=5267;DP4=2432,2546,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.68671e-05;MQSB=0.943037;RPB=0.355259;SGB=25.439;VDB=0.770351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T352A|1065|LOC_Os09g10890|protein_coding|CODING|LOC_Os09g10890.1|3|1) FN3696-S.SNP.9:5985178 chr09:005985178 0 W/5985178-5985178 FN3696-S SNP G -> A AC=2;AN=190;BQB=0.920068;DP=3087;DP4=1380,1546,13,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.43854e-13;MQSB=0.999137;RPB=0.980736;SGB=94.6341;VDB=0.356324;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.9:5989319 chr09:005989319 0 W/5989319-5989319 FN748-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g10900 retrotransposon protein, putative, unclassified, expressed SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3330-S.SNP.9:5991470 chr09:005991470 0 W/5991470-5991470 FN3330-S SNP C -> G AC=1;AN=182;BQB=0.733471;DP=3019;DP4=1615,1289,7,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000331235;MQB=1.94049e-09;MQSB=0.887465;RPB=0.702885;SGB=60.4004;VDB=0.441871;EFF=UTR_3_PRIME(MODIFIER||187||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.1|4|1),UTR_3_PRIME(MODIFIER||187||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.2|4|1),UTR_3_PRIME(MODIFIER||187||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.3|3|1) FN2323.SNP.9:5992768 chr09:005992768 0 W/5992768-5992768 FN2323 SNP T -> A AC=1;AN=192;BQB=0.411838;DP=5070;DP4=2189,2565,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66157e-16;MQSB=0.883978;RPB=0.480709;SGB=86.1165;VDB=0.121495;EFF=INTRON(MODIFIER||||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.1|2|1),INTRON(MODIFIER||||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.2|2|1),INTRON(MODIFIER||||190|LOC_Os09g10910|protein_coding|CODING|LOC_Os09g10910.3|1|1) FN835-S.SNP.9:5994745 chr09:005994745 0 W/5994745-5994745 FN835-S Single Base Substitution T-G INTRON HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1548-S.SNP.9:5997905 chr09:005997905 0 W/5997905-5997905 FN1548-S SNP G -> A AC=2;AN=188;BQB=0.999809;DP=1373;DP4=946,385,6,5;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.931e-06;MQSB=0.153717;RPB=0.0855573;SGB=28.8977;VDB=0.185371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.9:5997906 chr09:005997906 0 W/5997906-5997906 FN1548-S SNP C -> T AC=2;AN=188;BQB=0.954648;DP=1378;DP4=942,389,6,5;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=2.03414e-05;MQSB=0.14366;RPB=0.136637;SGB=28.8977;VDB=0.128058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.9:6002510 chr09:006002510 0 W/6002510-6002510 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.662295;DP=3917;DP4=1994,1854,17,11;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.259637;MQB=0.0673756;MQSB=1.35006e-08;RPB=0.712843;SGB=89.1337;VDB=0.473905;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y212|1525|LOC_Os09g10920|protein_coding|CODING|LOC_Os09g10920.1|1|1) FN2423.SNP.9:6019146 chr09:006019146 0 W/6019146-6019146 FN2423 SNP C -> T AC=1;AN=200;BQB=0.939211;DP=4497;DP4=2129,2105,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76472e-14;MQSB=0.903307;RPB=0.97243;SGB=50.3263;VDB=0.90242;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F315|431|LOC_Os09g10930|protein_coding|CODING|LOC_Os09g10930.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F315|431|LOC_Os09g10930|protein_coding|CODING|LOC_Os09g10930.2|7|1) FN596-S.SNP.9:6024033 chr09:006024033 0 W/6024033-6024033 FN596-S Single Base Substitution T-A INTRON HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN1230-S.SNP.9:6024155 chr09:006024155 0 W/6024155-6024155 FN1230-S Single Base Substitution C-T INTRON HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN-26.SNP.9:6029287 chr09:006029287 0 W/6029287-6029287 FN-26 Single Base Substitution G-T INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN3512-S.SNP.9:6029287 chr09:006029287 0 W/6029287-6029287 FN3512-S SNP G -> T AC=1;AN=188;BQB=0.441417;DP=2893;DP4=1423,1400,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.66594e-07;MQSB=0.989109;RPB=0.996448;SGB=18.4463;VDB=0.703806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3789-S.SNP.9:6029287 chr09:006029287 0 W/6029287-6029287 FN3789-S SNP G -> T AC=1;AN=190;BQB=0.566481;DP=2989;DP4=1465,1409,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12233e-09;MQSB=0.920028;RPB=0.29629;SGB=46.7622;VDB=0.10895;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.9:6029287 chr09:006029287 0 W/6029287-6029287 W246-5-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN-60.SNP.9:6030439 chr09:006030439 0 W/6030439-6030439 FN-60 Single Base Substitution G-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1436-S.SNP.9:6039314 chr09:006039314 0 W/6039314-6039314 FN1436-S Single Base Substitution G-T INTRON HOMO SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3050-S.SNP.9:6043835 chr09:006043835 0 W/6043835-6043835 FN3050-S SNP A -> T AC=1;AN=184;BQB=0.949683;DP=2910;DP4=1282,1440,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07923e-09;MQSB=0.99607;RPB=0.999893;SGB=49.835;VDB=0.910726;EFF=INTRON(MODIFIER||||1740|LOC_Os09g10960|protein_coding|CODING|LOC_Os09g10960.1|4|1) FN-142.SNP.9:6049250 chr09:006049250 0 W/6049250-6049250 FN-142 Single Base Substitution T-C UTR_5_PRIME HOMO SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN2438.SNP.9:6060794 chr09:006060794 0 W/6060794-6060794 FN2438 SNP G -> T AC=1;AN=200;BQB=0.970243;DP=4736;DP4=1934,2472,15,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.17969e-07;MQSB=1.1355e-09;RPB=0.88551;SGB=52.9314;VDB=0.619001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.9:6063978 chr09:006063978 0 W/6063978-6063978 FN1043-S Single Base Substitution G-A INTRON HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN514-S.SNP.9:6070287 chr09:006070287 0 W/6070287-6070287 FN514-S Single Base Substitution G-A INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2480.SNP.9:6070674 chr09:006070674 0 W/6070674-6070674 FN2480 SNP C -> G AC=1;AN=200;BQB=0.176757;DP=4446;DP4=2045,2128,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75659e-06;MQSB=0.886994;RPB=0.809089;SGB=16.4591;VDB=0.200231;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.9:6086294 chr09:006086294 0 W/6086294-6086294 FN519-S Single Base Substitution C-T INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN1744-S.SNP.9:6090306 chr09:006090306 0 W/6090306-6090306 FN1744-S SNP G -> T AC=1;AN=188;BQB=0.765396;DP=3224;DP4=1068,2125,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4275e-05;MQSB=0.94595;RPB=0.957164;SGB=3.99491;VDB=0.610049;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.9:6092927 chr09:006092927 0 W/6092927-6092927 FN530-S Single Base Substitution A-G INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN4231-S.SNP.9:6111364 chr09:006111364 0 W/6111364-6111364 FN4231-S SNP G -> A AC=1;AN=170;BQB=0.975533;DP=2499;DP4=1164,1270,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.00264e-09;MQSB=0.982656;RPB=0.449153;SGB=52.3148;VDB=0.407549;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.9:6114503 chr09:006114503 0 W/6114503-6114503 FN534-S Single Base Substitution T-A INTERGENIC HET SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3578-S.SNP.9:6115942 chr09:006115942 0 W/6115942-6115942 FN3578-S SNP A -> T AC=1;AN=188;BQB=0.795209;DP=3243;DP4=1139,1940,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.07788e-07;MQSB=0.995847;RPB=0.950654;SGB=43.0708;VDB=0.282437;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.9:6127691 chr09:006127691 0 W/6127691-6127691 FN427-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os09g11030 retrotransposon protein, putative, unclassified, expressed SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN427-S.SNP.9:6127692 chr09:006127692 0 W/6127692-6127692 FN427-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g11030 retrotransposon protein, putative, unclassified, expressed SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2308.SNP.9:6132816 chr09:006132816 0 W/6132816-6132816 FN2308 SNP A -> T AC=1;AN=192;BQB=0.157517;DP=4424;DP4=2241,1789,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74808e-06;MQSB=0.657858;RPB=0.928934;SGB=-15.8974;VDB=0.871028;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P737|1783|LOC_Os09g11040|protein_coding|CODING|LOC_Os09g11040.1|3|1) FN3396-S.SNP.9:6155134 chr09:006155134 0 W/6155134-6155134 FN3396-S SNP A -> G AC=1;AN=184;BQB=0.838101;DP=3336;DP4=1554,1678,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00029976;MQB=0.000137615;MQSB=0.95759;RPB=0.600342;SGB=75.8731;VDB=0.133212;EFF=INTRON(MODIFIER||||1497|LOC_Os09g11100|protein_coding|CODING|LOC_Os09g11100.1|1|1) FN2489.SNP.9:6157005 chr09:006157005 0 W/6157005-6157005 FN2489 SNP C -> T AC=1;AN=200;BQB=0.413114;DP=4126;DP4=2192,1682,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.2333e-10;MQSB=0.865719;RPB=0.92629;SGB=34.6953;VDB=0.564751;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P736S|1497|LOC_Os09g11100|protein_coding|CODING|LOC_Os09g11100.1|4|1) FN3771-S.SNP.9:6160910 chr09:006160910 0 W/6160910-6160910 FN3771-S SNP G -> A AC=1;AN=190;BQB=0.915814;DP=3106;DP4=1511,1477,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0325177;MQB=0.243308;MQSB=0.249685;RPB=0.0427894;SGB=71.8647;VDB=0.38211;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S627|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|7|1) W596-1-1.SNP.9:6161574 chr09:006161574 0 W/6161574-6161574 W596-1-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN-167.SNP.9:6162278 chr09:006162278 0 W/6162278-6162278 FN-167 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g11110 retrotransposon protein, putative, unclassified, expressed SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1623-S.SNP.9:6162278 chr09:006162278 0 W/6162278-6162278 FN1623-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os09g11110 retrotransposon protein, putative, unclassified, expressed SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3510-S.SNP.9:6162278 chr09:006162278 0 W/6162278-6162278 FN3510-S SNP G -> A AC=2;AN=188;BQB=0.966415;DP=2877;DP4=1248,1527,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000347584;MQB=3.78235e-13;MQSB=0.247145;RPB=0.515562;SGB=117.128;VDB=0.0560941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A308V|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|4|1) FN3731-S.SNP.9:6162278 chr09:006162278 0 W/6162278-6162278 FN3731-S SNP G -> A AC=1;AN=190;BQB=0.697078;DP=2775;DP4=1171,1449,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00036036;MQB=2.27288e-06;MQSB=0.998769;RPB=0.752145;SGB=39.6545;VDB=0.980622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A308V|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|4|1) FN4125-S.SNP.9:6162278 chr09:006162278 0 W/6162278-6162278 FN4125-S SNP G -> A AC=2;AN=182;BQB=0.929101;DP=2918;DP4=1286,1524,17,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.0003427;MQB=2.16544e-12;MQSB=0.413748;RPB=0.640351;SGB=116.285;VDB=0.178338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A308V|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|4|1) FN2421.SNP.9:6162984 chr09:006162984 0 W/6162984-6162984 FN2421 SNP C -> T AC=1;AN=200;BQB=0.578141;DP=4462;DP4=2222,2010,7,8;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0138951;MQB=0.000866307;MQSB=0.000303702;RPB=0.617399;SGB=63.4749;VDB=0.392702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E129K|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|2|1) FN2421.SNP.9:6162985 chr09:006162985 0 W/6162985-6162985 FN2421 SNP A -> T AC=1;AN=200;BQB=0.999767;DP=4468;DP4=2240,2000,7,9;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0138765;MQB=0.000385401;MQSB=0.00029329;RPB=0.823162;SGB=47.4799;VDB=0.480129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F128L|674|LOC_Os09g11110|protein_coding|CODING|LOC_Os09g11110.1|2|1) FN4179-S.SNP.9:6164386 chr09:006164386 0 W/6164386-6164386 FN4179-S SNP C -> T AC=1;AN=170;BQB=0.997586;DP=2635;DP4=1361,1145,9,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.18842e-11;MQSB=0.24957;RPB=0.523008;SGB=62.4192;VDB=0.0967743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.9:6172650 chr09:006172650 0 W/6172650-6172650 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.99586;DP=3687;DP4=1732,1780,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.99459e-05;MQSB=0.548927;RPB=0.977078;SGB=25.7687;VDB=0.585652;EFF=INTRON(MODIFIER||||335|LOC_Os09g11140|protein_coding|CODING|LOC_Os09g11140.1|4|1) FN2235-S.SNP.9:6174783 chr09:006174783 0 W/6174783-6174783 FN2235-S SNP A -> T AC=1;AN=190;BQB=0.927272;DP=4392;DP4=2187,1784,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59979e-08;MQSB=0.0377661;RPB=0.851675;SGB=31.3213;VDB=0.605819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.9:6174853 chr09:006174853 0 W/6174853-6174853 FN2373 SNP C -> T AC=1;AN=192;BQB=0.822249;DP=4961;DP4=2275,2364,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.56829e-09;MQSB=0.914312;RPB=0.464943;SGB=-15.333;VDB=0.919901;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.9:6178471 chr09:006178471 0 W/6178471-6178471 FN3803-S SNP A -> T AC=1;AN=190;BQB=0.999698;DP=3427;DP4=1545,1737,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.0002918;MQB=7.52905e-13;MQSB=0.987869;RPB=0.825666;SGB=36.4291;VDB=0.99531;EFF=INTRON(MODIFIER||||320|LOC_Os09g11150|protein_coding|CODING|LOC_Os09g11150.1|2|1) FN2534-S.SNP.9:6179294 chr09:006179294 0 W/6179294-6179294 FN2534-S SNP C -> T AC=2;AN=198;BQB=0.949597;DP=4003;DP4=2027,1738,18,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.14295e-21;MQSB=0.996135;RPB=0.984756;SGB=130.027;VDB=0.603132;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F219|320|LOC_Os09g11150|protein_coding|CODING|LOC_Os09g11150.1|4|1) FN764-S.SNP.9:6179294 chr09:006179294 0 W/6179294-6179294 FN764-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-184.SNP.9:6183955 chr09:006183955 0 W/6183955-6183955 FN-184 Single Base Substitution G-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN224-S.SNP.9:6188262 chr09:006188262 0 W/6188262-6188262 FN224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN4135-S.SNP.9:6188532 chr09:006188532 0 W/6188532-6188532 FN4135-S SNP G -> A AC=1;AN=182;BQB=0.966829;DP=2522;DP4=1210,1228,10,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.5202e-10;MQSB=0.973409;RPB=0.828947;SGB=71.1765;VDB=0.208523;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.9:6188532 chr09:006188532 0 W/6188532-6188532 FN629-S Single Base Substitution G-A INTERGENIC HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN1760-S.SNP.9:6189283 chr09:006189283 0 W/6189283-6189283 FN1760-S SNP A -> G AC=1;AN=188;BQB=0.37279;DP=3242;DP4=2106,1098,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000339637;MQSB=0.989566;RPB=0.596968;SGB=2.45162;VDB=0.906061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.9:6190342 chr09:006190342 0 W/6190342-6190342 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.658273;DP=4070;DP4=1837,2050,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.72064e-06;MQSB=0.963649;RPB=0.845226;SGB=29.3637;VDB=0.307759;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.9:6192690 chr09:006192690 0 W/6192690-6192690 FN1536-S Single Base Substitution C-A INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2499.SNP.9:6192690 chr09:006192690 0 W/6192690-6192690 FN2499 SNP C -> A AC=2;AN=200;BQB=0.131961;DP=5084;DP4=2422,2362,25,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.30456e-24;MQSB=0.999992;RPB=0.0848606;SGB=48.014;VDB=0.901714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.9:6193786 chr09:006193786 0 W/6193786-6193786 FN3444-S SNP C -> T AC=2;AN=184;BQB=0.847939;DP=2667;DP4=1419,1165,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.16387e-15;MQSB=0.95965;RPB=0.743601;SGB=51.0148;VDB=0.991449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.9:6197893 chr09:006197893 0 W/6197893-6197893 FN3916-S SNP G -> T AC=1;AN=158;BQB=0.884504;DP=2590;DP4=1013,1485,6,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.55087e-09;MQSB=0.976998;RPB=0.998464;SGB=77.6532;VDB=0.815581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.9:6207036 chr09:006207036 0 W/6207036-6207036 FN1031-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g11190 hypothetical protein SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN882-S.SNP.9:6210809 chr09:006210809 0 W/6210809-6210809 FN882-S Single Base Substitution G-A INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN3770-S.SNP.9:6214379 chr09:006214379 0 W/6214379-6214379 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.948342;DP=2718;DP4=1381,1210,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.88446e-08;MQSB=0.988466;RPB=0.426282;SGB=49.0954;VDB=0.333659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.9:6216835 chr09:006216835 0 W/6216835-6216835 FN3381-S SNP A -> T AC=1;AN=184;BQB=0.980081;DP=2885;DP4=1589,1198,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.11641e-10;MQSB=0.499295;RPB=0.71414;SGB=56.8786;VDB=0.994782;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.9:6221996 chr09:006221996 0 W/6221996-6221996 FN-181 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN2555-S.SNP.9:6228135 chr09:006228135 0 W/6228135-6228135 FN2555-S SNP G -> A AC=1;AN=198;BQB=0.841719;DP=3812;DP4=1560,1936,4,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.82599e-07;MQSB=0.4476;RPB=0.0482352;SGB=50.9344;VDB=0.0603441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.9:6229152 chr09:006229152 0 W/6229152-6229152 FN1760-S SNP G -> A AC=1;AN=188;BQB=0.986227;DP=2287;DP4=1225,1019,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000140139;MQSB=0.983804;RPB=0.929452;SGB=10.8165;VDB=0.022095;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.9:6229245 chr09:006229245 0 W/6229245-6229245 FN2309 SNP C -> T AC=1;AN=192;BQB=0.455526;DP=4554;DP4=2187,1985,16,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.82777e-14;MQSB=0.510595;RPB=0.666276;SGB=19.8696;VDB=0.80658;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.9:6237020 chr09:006237020 0 W/6237020-6237020 FN1327-S Single Base Substitution T-C INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN1240-S.SNP.9:6242734 chr09:006242734 0 W/6242734-6242734 FN1240-S Single Base Substitution C-A INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3917-S.SNP.9:6248532 chr09:006248532 0 W/6248532-6248532 FN3917-S SNP T -> C AC=1;AN=158;BQB=0.69747;DP=2774;DP4=1167,1475,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.3596e-07;MQSB=0.976606;RPB=0.927606;SGB=64.5449;VDB=0.0794472;EFF=INTRON(MODIFIER||||302|LOC_Os09g11250|protein_coding|CODING|LOC_Os09g11250.1|1|1) FN-300.SNP.9:6264887 chr09:006264887 0 W/6264887-6264887 FN-300 Single Base Substitution C-T INTERGENIC HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN1049-S.SNP.9:6265881 chr09:006265881 0 W/6265881-6265881 FN1049-S Single Base Substitution C-T INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2536-S.SNP.9:6267273 chr09:006267273 0 W/6267273-6267273 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.0612616;DP=3897;DP4=1514,2109,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.20023e-05;MQSB=0.941547;RPB=0.955599;SGB=24.1541;VDB=0.997794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.9:6268373 chr09:006268373 0 W/6268373-6268373 FN1412-S Single Base Substitution G-A INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3293-S.SNP.9:6269266 chr09:006269266 0 W/6269266-6269266 FN3293-S SNP A -> G AC=2;AN=184;BQB=0.86035;DP=2865;DP4=1312,1373,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.01366e-13;MQSB=0.999496;RPB=0.626067;SGB=85.0529;VDB=0.924101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.9:6275759 chr09:006275759 0 W/6275759-6275759 FN1109-S Single Base Substitution T-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3677-S.SNP.9:6284111 chr09:006284111 0 W/6284111-6284111 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.85321;DP=2620;DP4=1347,1195,1,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07608e-05;MQSB=0.893267;RPB=0.598437;SGB=32.5467;VDB=0.433653;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.9:6302684 chr09:006302684 0 W/6302684-6302684 FN1106-S Single Base Substitution A-G INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2485.SNP.9:6312484 chr09:006312484 0 W/6312484-6312484 FN2485 SNP C -> T AC=2;AN=200;BQB=0.957826;DP=2916;DP4=1304,993,8,8;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.0058299;MQB=1.73239e-06;MQSB=0.666126;RPB=0.161799;SGB=-14.3206;VDB=0.583416;EFF=INTERGENIC(MODIFIER||||||||||1) FN-205.SNP.9:6313625 chr09:006313625 0 W/6313625-6313625 FN-205 Single Base Substitution C-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN1625-S.SNP.9:6315964 chr09:006315964 0 W/6315964-6315964 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:6315964 chr09:006315964 0 W/6315964-6315964 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.577422;DP=3585;DP4=1914,1631,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00167364;MQB=1.09349e-08;MQSB=0.0868511;RPB=0.548567;SGB=-9.56681;VDB=0.546605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.9:6318875 chr09:006318875 0 W/6318875-6318875 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.715513;DP=4253;DP4=1940,2094,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.0553e-08;MQSB=0.975539;RPB=0.999709;SGB=36.5539;VDB=0.799441;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.9:6321143 chr09:006321143 0 W/6321143-6321143 FN_N1-202-3 Single Base Substitution G-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN1035-S.SNP.9:6321623 chr09:006321623 0 W/6321623-6321623 FN1035-S Single Base Substitution G-T INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-237.SNP.9:6321943 chr09:006321943 0 W/6321943-6321943 FN-237 Single Base Substitution G-A INTERGENIC HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-346.SNP.9:6321943 chr09:006321943 0 W/6321943-6321943 FN-346 Single Base Substitution G-A INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN3355-S.SNP.9:6321943 chr09:006321943 0 W/6321943-6321943 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.540353;DP=2154;DP4=1127,934,6,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.1328e-10;MQSB=0.613743;RPB=0.597158;SGB=93.9603;VDB=0.0123878;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.9:6326850 chr09:006326850 0 W/6326850-6326850 FN680-S Single Base Substitution C-T INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3382-S.SNP.9:6329388 chr09:006329388 0 W/6329388-6329388 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.779357;DP=3207;DP4=1457,1555,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.4822e-06;MQSB=0.432366;RPB=0.644591;SGB=25.1826;VDB=0.86321;EFF=INTRON(MODIFIER||||1069|LOC_Os09g11380|protein_coding|CODING|LOC_Os09g11380.1|2|1) FN-151.SNP.9:6332267 chr09:006332267 0 W/6332267-6332267 FN-151 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g11380 expressed protein SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN3785-S.SNP.9:6336655 chr09:006336655 0 W/6336655-6336655 FN3785-S SNP G -> A AC=1;AN=190;BQB=0.973763;DP=2466;DP4=1180,1166,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.38305e-07;MQSB=0.917902;RPB=0.293646;SGB=39.9877;VDB=0.925216;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q713*|727|LOC_Os09g11390|protein_coding|CODING|LOC_Os09g11390.1|10|1) FN1319-S.SNP.9:6338280 chr09:006338280 0 W/6338280-6338280 FN1319-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1319-S.SNP.9:6338281 chr09:006338281 0 W/6338281-6338281 FN1319-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1319-S.SNP.9:6338283 chr09:006338283 0 W/6338283-6338283 FN1319-S Single Base Substitution C-A SPLICE_SITE_DONOR HET LOC_Os09g11390 transposon protein, putative, unclassified, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1514-S.SNP.9:6341862 chr09:006341862 0 W/6341862-6341862 FN1514-S Single Base Substitution T-G INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2698-S.SNP.9:6342171 chr09:006342171 0 W/6342171-6342171 FN2698-S SNP A -> C AC=1;AN=200;BQB=0.0204513;DP=4700;DP4=2123,2369,24,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00849e-24;MQSB=0.828904;RPB=0.793592;SGB=59.2502;VDB=0.657655;EFF=INTRON(MODIFIER||||727|LOC_Os09g11390|protein_coding|CODING|LOC_Os09g11390.1|1|1) FN2795-S.SNP.9:6343340 chr09:006343340 0 W/6343340-6343340 FN2795-S SNP C -> G AC=1;AN=198;BQB=0.953865;DP=3854;DP4=1527,1933,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.74481e-10;MQSB=0.894119;RPB=0.919961;SGB=10.9445;VDB=0.122279;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.9:6345609 chr09:006345609 0 W/6345609-6345609 FN2366 SNP T -> C AC=2;AN=192;BQB=0.619473;DP=5079;DP4=2330,2454,24,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.07937e-28;MQSB=0.98057;RPB=1;SGB=62.107;VDB=0.0214907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.9:6348303 chr09:006348303 0 W/6348303-6348303 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.558455;DP=4574;DP4=2088,2150,19,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57041e-18;MQSB=0.999396;RPB=0.998982;SGB=33.5675;VDB=0.677356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.9:6352972 chr09:006352972 0 W/6352972-6352972 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.98663;DP=2818;DP4=1158,1602,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0876508;MQB=0.851369;MQSB=3.69393e-40;RPB=0.746495;SGB=67.1521;VDB=0.768478;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D894N|897|LOC_Os09g11400|protein_coding|CODING|LOC_Os09g11400.1|3|1) FN1728-S.SNP.9:6357635 chr09:006357635 0 W/6357635-6357635 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.997541;DP=1741;DP4=794,872,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.135554;MQB=0.152883;MQSB=0.0346898;RPB=0.98937;SGB=53.7007;VDB=0.903987;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P97|489|LOC_Os09g11420|protein_coding|CODING|LOC_Os09g11420.1|1|1) FN3514-S.SNP.9:6358052 chr09:006358052 0 W/6358052-6358052 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.934503;DP=3746;DP4=1472,2201,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.103577;MQB=0.869862;MQSB=0.0525203;RPB=0.10091;SGB=44.4357;VDB=0.0516872;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E236|489|LOC_Os09g11420|protein_coding|CODING|LOC_Os09g11420.1|1|1) FN4172-S.SNP.9:6358397 chr09:006358397 0 W/6358397-6358397 FN4172-S SNP C -> T AC=1;AN=170;BQB=0.685492;DP=2709;DP4=1334,1275,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0642303;MQB=0.307742;MQSB=3.24596e-26;RPB=0.673572;SGB=52.0913;VDB=0.894845;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C351|489|LOC_Os09g11420|protein_coding|CODING|LOC_Os09g11420.1|1|1) FN2572-S.SNP.9:6361628 chr09:006361628 0 W/6361628-6361628 FN2572-S SNP A -> C AC=1;AN=198;BQB=0.177494;DP=4160;DP4=1649,2264,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.25711e-10;MQSB=0.952502;RPB=0.999885;SGB=31.9395;VDB=0.012354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.9:6364593 chr09:006364593 0 W/6364593-6364593 FN3632-S SNP C -> A AC=2;AN=190;BQB=0.891767;DP=2882;DP4=1554,1166,18,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.57744e-17;MQSB=0.993283;RPB=0.353894;SGB=72.1834;VDB=0.319279;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.9:6379338 chr09:006379338 0 W/6379338-6379338 FN465-S Single Base Substitution A-C INTRON HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN588-S.SNP.9:6389530 chr09:006389530 0 W/6389530-6389530 FN588-S Single Base Substitution C-A STOP_GAINED HET LOC_Os09g11460 AP2 domain containing protein, expressed SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3869-S.SNP.9:6389790 chr09:006389790 0 W/6389790-6389790 FN3869-S SNP G -> A AC=1;AN=158;BQB=0.989935;DP=2897;DP4=1037,1746,10,16;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.41824e-14;MQSB=0.960209;RPB=0.776074;SGB=47.5132;VDB=0.368891;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.9:6392969 chr09:006392969 0 W/6392969-6392969 W502-3-4 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g11470 expressed protein SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN589-S.SNP.9:6410167 chr09:006410167 0 W/6410167-6410167 FN589-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g11490 retrotransposon protein, putative, unclassified, expressed SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2651-S.SNP.9:6410989 chr09:006410989 0 W/6410989-6410989 FN2651-S SNP T -> C AC=1;AN=200;BQB=0.332183;DP=4509;DP4=2079,1849,18,22;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00709692;MQB=2.11994e-15;MQSB=0.871856;RPB=0.677445;SGB=-44.3966;VDB=0.26601;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A227|983|LOC_Os09g11490|protein_coding|CODING|LOC_Os09g11490.1|2|1) FN532-S.SNP.9:6412602 chr09:006412602 0 W/6412602-6412602 FN532-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g11490 retrotransposon protein, putative, unclassified, expressed SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2412.SNP.9:6412666 chr09:006412666 0 W/6412666-6412666 FN2412 SNP G -> A AC=1;AN=200;BQB=0.690973;DP=4266;DP4=2178,1841,6,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00117206;MQB=2.36802e-07;MQSB=0.449305;RPB=0.932617;SGB=58.8698;VDB=0.780064;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R755H|983|LOC_Os09g11490|protein_coding|CODING|LOC_Os09g11490.1|3|1) FN3720-S.SNP.9:6416435 chr09:006416435 0 W/6416435-6416435 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.909637;DP=2101;DP4=988,1019,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00475964;MQB=0.0514248;MQSB=0.000150058;RPB=0.294352;SGB=58.2031;VDB=0.748081;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1166|1978|LOC_Os09g11500|protein_coding|CODING|LOC_Os09g11500.1|5|1) FN3463-S.SNP.9:6419391 chr09:006419391 0 W/6419391-6419391 FN3463-S SNP C -> A AC=1;AN=184;BQB=0.835201;DP=3029;DP4=1501,1433,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.358204;MQB=0.307499;MQSB=0;RPB=0.697319;SGB=62.3078;VDB=0.462892;EFF=INTRON(MODIFIER||||1978|LOC_Os09g11500|protein_coding|CODING|LOC_Os09g11500.1|3|1) FN3915-S.SNP.9:6420363 chr09:006420363 0 W/6420363-6420363 FN3915-S SNP T -> A AC=1;AN=158;BQB=0.892281;DP=2547;DP4=1354,1107,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0376914;MQB=0.243791;MQSB=7.43427e-25;RPB=0.908835;SGB=38.3284;VDB=0.13679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tTc|Y854F|1978|LOC_Os09g11500|protein_coding|CODING|LOC_Os09g11500.1|2|1) FN443-S.SNP.9:6421488 chr09:006421488 0 W/6421488-6421488 FN443-S Single Base Substitution G-A STOP_GAINED HET LOC_Os09g11500 retrotransposon protein, putative, unclassified, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN3312-S.SNP.9:6425151 chr09:006425151 0 W/6425151-6425151 FN3312-S SNP G -> C AC=1;AN=184;BQB=0.250318;DP=3061;DP4=1473,1453,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.92724e-09;MQSB=0.94441;RPB=0.707371;SGB=-13.1487;VDB=0.383778;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.9:6438999 chr09:006438999 0 W/6438999-6438999 FN973-S Single Base Substitution G-T INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN4184-S.SNP.9:6443111 chr09:006443111 0 W/6443111-6443111 FN4184-S SNP C -> A AC=1;AN=170;BQB=0.960658;DP=2626;DP4=1229,1333,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.77335e-11;MQSB=0.894858;RPB=0.577334;SGB=70.0854;VDB=0.093894;EFF=INTRON(MODIFIER||||275|LOC_Os09g11530|protein_coding|CODING|LOC_Os09g11530.1|1|1) FN2497.SNP.9:6446547 chr09:006446547 0 W/6446547-6446547 FN2497 SNP G -> A AC=1;AN=200;BQB=0.894361;DP=4742;DP4=2322,2186,7,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0168705;MQB=0.00262054;MQSB=9.29999e-06;RPB=0.887956;SGB=7.88476;VDB=0.692372;EFF=INTRON(MODIFIER||||1081|LOC_Os09g11550|protein_coding|CODING|LOC_Os09g11550.1|1|1) FN1642-S.SNP.9:6456551 chr09:006456551 0 W/6456551-6456551 FN1642-S Single Base Substitution C-A INTERGENIC Homo SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2479.SNP.9:6459630 chr09:006459630 0 W/6459630-6459630 FN2479 SNP C -> G AC=1;AN=200;BQB=0.914289;DP=4690;DP4=2249,2209,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32297e-05;MQSB=0.996632;RPB=0.987662;SGB=33.0593;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E1495Q|1587|LOC_Os09g11580|protein_coding|CODING|LOC_Os09g11580.1|9|1) FN1073-S.SNP.9:6460002 chr09:006460002 0 W/6460002-6460002 FN1073-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g11580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3698-S.SNP.9:6471574 chr09:006471574 0 W/6471574-6471574 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.96535;DP=2713;DP4=1323,1232,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87676e-08;MQSB=0.99898;RPB=0.999354;SGB=62.7569;VDB=0.157895;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.9:6474717 chr09:006474717 0 W/6474717-6474717 FN429-S Single Base Substitution C-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3836-S.SNP.9:6477201 chr09:006477201 0 W/6477201-6477201 FN3836-S SNP G -> A AC=1;AN=190;BQB=0.920751;DP=2947;DP4=1528,1315,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2554e-09;MQSB=0.96331;RPB=0.718557;SGB=67.3108;VDB=0.997441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R289H|706|LOC_Os09g11600|protein_coding|CODING|LOC_Os09g11600.1|2|1) FN-128.SNP.9:6478150 chr09:006478150 0 W/6478150-6478150 FN-128 Single Base Substitution G-A INTRON HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN407-S.SNP.9:6478749 chr09:006478749 0 W/6478749-6478749 FN407-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN3821-S.SNP.9:6478901 chr09:006478901 0 W/6478901-6478901 FN3821-S SNP C -> T AC=2;AN=190;BQB=0.892639;DP=2925;DP4=1479,1359,6,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45197e-08;MQSB=0.997407;RPB=0.999599;SGB=71.8647;VDB=0.638374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S677F|706|LOC_Os09g11600|protein_coding|CODING|LOC_Os09g11600.1|6|1) FN2532-S.SNP.9:6486653 chr09:006486653 0 W/6486653-6486653 FN2532-S SNP C -> G AC=1;AN=190;BQB=0.940635;DP=3900;DP4=1735,1972,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.66312e-15;MQSB=0.631248;RPB=0.515125;SGB=79.6954;VDB=0.053829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.9:6491622 chr09:006491622 0 W/6491622-6491622 FN3831-S SNP G -> C AC=1;AN=190;BQB=0.787679;DP=3122;DP4=1534,1501,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.224856;MQB=0.354964;MQSB=1.74101e-13;RPB=0.480942;SGB=53.6492;VDB=0.69078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tCt|C342S|1990|LOC_Os09g11630|protein_coding|CODING|LOC_Os09g11630.1|1|1) FN2205-S.SNP.9:6494948 chr09:006494948 0 W/6494948-6494948 FN2205-S SNP C -> A AC=1;AN=190;BQB=0.0368108;DP=3938;DP4=1845,1696,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000761808;MQB=0.000346748;MQSB=0.896491;RPB=0.669419;SGB=68.0854;VDB=0.620851;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G1389|1990|LOC_Os09g11630|protein_coding|CODING|LOC_Os09g11630.1|3|1) FN_812-4-1.SNP.9:6495026 chr09:006495026 0 W/6495026-6495026 FN_812-4-1 Single Base Substitution G-A Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1356-S.SNP.9:6495531 chr09:006495531 0 W/6495531-6495531 FN1356-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g11630 retrotransposon protein, putative, unclassified, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3387-S.SNP.9:6498645 chr09:006498645 0 W/6498645-6498645 FN3387-S SNP G -> A AC=1;AN=184;BQB=0.898434;DP=4017;DP4=1879,2059,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.67421e-14;MQSB=0.85614;RPB=0.994961;SGB=67.4439;VDB=0.336659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A673V|1037|LOC_Os09g11640|protein_coding|CODING|LOC_Os09g11640.1|1|1) FN2192-S.SNP.9:6501864 chr09:006501864 0 W/6501864-6501864 FN2192-S SNP A -> G AC=1;AN=190;BQB=0.866746;DP=4159;DP4=1969,1829,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.050012;MQB=0.854084;MQSB=0.0658737;RPB=0.286575;SGB=117.403;VDB=0.265482;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.9:6503708 chr09:006503708 0 W/6503708-6503708 FN480-S Single Base Substitution C-A INTRON HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3822-S.SNP.9:6504595 chr09:006504595 0 W/6504595-6504595 FN3822-S SNP T -> C AC=2;AN=190;BQB=0.809185;DP=2581;DP4=1132,1363,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.89163e-13;MQSB=0.738361;RPB=0.897083;SGB=54.3062;VDB=0.352747;EFF=INTRON(MODIFIER||||172|LOC_Os09g11660|protein_coding|CODING|LOC_Os09g11660.1|2|1) FN563-S.SNP.9:6509930 chr09:006509930 0 W/6509930-6509930 FN563-S Single Base Substitution C-A INTERGENIC HOMO SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2296.SNP.9:6510340 chr09:006510340 0 W/6510340-6510340 FN2296 SNP G -> T AC=1;AN=192;BQB=0.590181;DP=4362;DP4=2211,1785,21,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.31269e-13;MQSB=0.708537;RPB=0.806352;SGB=103.938;VDB=0.758047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S87R|151|LOC_Os09g11670|protein_coding|CODING|LOC_Os09g11670.1|1|1) FN_N1-26-1.SNP.9:6512217 chr09:006512217 0 W/6512217-6512217 FN_N1-26-1 Single Base Substitution C-T HET SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN971-S.SNP.9:6512274 chr09:006512274 0 W/6512274-6512274 FN971-S Single Base Substitution A-T INTERGENIC HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN678-S.SNP.9:6512310 chr09:006512310 0 W/6512310-6512310 FN678-S Single Base Substitution C-A INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2618-S.SNP.9:6514077 chr09:006514077 0 W/6514077-6514077 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.637632;DP=4060;DP4=1823,2014,8,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.65745e-16;MQSB=0.998434;RPB=0.85515;SGB=118.476;VDB=0.738866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.9:6525726 chr09:006525726 0 W/6525726-6525726 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.974124;DP=2369;DP4=1126,1149,11,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.54865e-12;MQSB=0.999645;RPB=0.381247;SGB=40.4048;VDB=0.0663243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.9:6529411 chr09:006529411 0 W/6529411-6529411 FN2532-S SNP G -> A AC=1;AN=194;BQB=0.872252;DP=4105;DP4=2100,1779,15,4;HOB=5.31406e-05;ICB=0.000106829;MQ=49;MQ0F=0;MQB=6.12103e-10;MQSB=0.821069;RPB=0.693049;SGB=81.7147;VDB=0.193982;EFF=INTERGENIC(MODIFIER||||||||||1) FN-142.SNP.9:6531282 chr09:006531282 0 W/6531282-6531282 FN-142 Single Base Substitution C-T INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN4148-S.SNP.9:6537609 chr09:006537609 0 W/6537609-6537609 FN4148-S SNP C -> T AC=1;AN=170;BQB=0.949551;DP=2145;DP4=926,1156,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.1236e-08;MQSB=0.970298;RPB=0.686487;SGB=47.8722;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN1508-S.SNP.9:6546300 chr09:006546300 0 W/6546300-6546300 FN1508-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g11730 expressed protein SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1677-S.SNP.9:6546439 chr09:006546439 0 W/6546439-6546439 FN1677-S SNP A -> C AC=2;AN=188;BQB=0.0629303;DP=3510;DP4=1653,1804,15,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.82142e-11;MQSB=0.939699;RPB=0.431218;SGB=-335.894;VDB=0.792307;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggG|G50|258|LOC_Os09g11730|protein_coding|CODING|LOC_Os09g11730.1|3|1) FN1667-S.SNP.9:6549343 chr09:006549343 0 W/6549343-6549343 FN1667-S SNP A -> T AC=2;AN=188;BQB=0.379421;DP=3197;DP4=1834,1293,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.26078e-13;MQSB=0.911186;RPB=0.493296;SGB=-79.383;VDB=0.0228573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-107.SNP.9:6550088 chr09:006550088 0 W/6550088-6550088 FN-107 Single Base Substitution A-T INTERGENIC HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN631-S.SNP.9:6550756 chr09:006550756 0 W/6550756-6550756 FN631-S Single Base Substitution G-C INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3798-S.SNP.9:6551907 chr09:006551907 0 W/6551907-6551907 FN3798-S SNP G -> T AC=2;AN=190;BQB=0.673737;DP=2000;DP4=877,1042,8,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=0.000875285;MQSB=0.00128016;RPB=0.920487;SGB=67.3108;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.9:6552843 chr09:006552843 0 W/6552843-6552843 FN2683-S SNP C -> G AC=1;AN=200;BQB=0.9324;DP=5117;DP4=2212,2631,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.43003e-07;MQSB=0.929227;RPB=0.576414;SGB=40.4492;VDB=0.0864159;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.9:6557264 chr09:006557264 0 W/6557264-6557264 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.979358;DP=2537;DP4=1232,1258,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.03041e-05;MQSB=0.98887;RPB=0.278539;SGB=30.1021;VDB=0.575705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C676Y|810|LOC_Os09g11740|protein_coding|CODING|LOC_Os09g11740.1|5|1) FN358-S.SNP.9:6558086 chr09:006558086 0 W/6558086-6558086 FN358-S Single Base Substitution G-A INTRON HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2265-S.SNP.9:6566685 chr09:006566685 0 W/6566685-6566685 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.993511;DP=3200;DP4=1794,1186,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.34371e-11;MQSB=6.7417e-08;RPB=0.961072;SGB=64.5316;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.9:6569849 chr09:006569849 0 W/6569849-6569849 FN889-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g11750 transposon protein, putative, CACTA, En/Spm sub-class SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN3832-S.SNP.9:6571060 chr09:006571060 0 W/6571060-6571060 FN3832-S SNP C -> T AC=2;AN=190;BQB=0.997848;DP=2623;DP4=1215,1297,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00114373;MQB=9.28114e-15;MQSB=0.90627;RPB=0.410017;SGB=140.173;VDB=0.921326;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F635|656|LOC_Os09g11750|protein_coding|CODING|LOC_Os09g11750.1|3|1) FN875-S.SNP.9:6577363 chr09:006577363 0 W/6577363-6577363 FN875-S Single Base Substitution G-C INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1440-S.SNP.9:6589662 chr09:006589662 0 W/6589662-6589662 FN1440-S Single Base Substitution G-A INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2660-S.SNP.9:6591940 chr09:006591940 0 W/6591940-6591940 FN2660-S SNP G -> A AC=2;AN=200;BQB=0.387932;DP=4892;DP4=2508,2081,13,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.15546e-19;MQSB=0.999744;RPB=0.967806;SGB=94.3471;VDB=0.757813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.9:6591942 chr09:006591942 0 W/6591942-6591942 FN2660-S SNP A -> T AC=2;AN=200;BQB=0.996951;DP=4920;DP4=2571,2170,15,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.56032e-20;MQSB=0.964826;RPB=0.984533;SGB=65.9573;VDB=0.497828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.9:6592142 chr09:006592142 0 W/6592142-6592142 FN-66 Single Base Substitution A-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1367-S.SNP.9:6598821 chr09:006598821 0 W/6598821-6598821 FN1367-S Single Base Substitution A-T INTERGENIC HET SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN3535-S.SNP.9:6607532 chr09:006607532 0 W/6607532-6607532 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.964944;DP=2515;DP4=1067,1372,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30885e-05;MQSB=0.907518;RPB=0.994837;SGB=30.8063;VDB=0.990927;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.9:6610993 chr09:006610993 0 W/6610993-6610993 FN2584-S SNP A -> G AC=1;AN=188;BQB=0.87981;DP=3970;DP4=2131,1625,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.63526e-15;MQSB=0.978264;RPB=0.946442;SGB=79.6954;VDB=0.0833485;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.9:6613034 chr09:006613034 0 W/6613034-6613034 FN837-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN239-S.SNP.9:6625498 chr09:006625498 0 W/6625498-6625498 FN239-S Single Base Substitution A-T INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2276-S.SNP.9:6628156 chr09:006628156 0 W/6628156-6628156 FN2276-S SNP C -> T AC=2;AN=190;BQB=0.999928;DP=4496;DP4=2224,1952,45,32;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=2.61712e-32;MQSB=0.0713439;RPB=0.966939;SGB=124.337;VDB=0.822153;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.9:6629215 chr09:006629215 0 W/6629215-6629215 FN976-S Single Base Substitution T-C INTERGENIC HOMO SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN4025-S.SNP.9:6633119 chr09:006633119 0 W/6633119-6633119 FN4025-S SNP C -> T AC=2;AN=168;BQB=0.138727;DP=2799;DP4=1408,1257,17,10;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0;MQB=8.45451e-07;MQSB=0.161371;RPB=0.812118;SGB=51.3545;VDB=0.0927544;EFF=INTERGENIC(MODIFIER||||||||||1) FN3090-S.SNP.9:6638554 chr09:006638554 0 W/6638554-6638554 FN3090-S SNP G -> C AC=1;AN=184;BQB=0.566452;DP=3083;DP4=1813,1093,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=2.19884e-07;MQSB=0.337332;RPB=0.0775648;SGB=56.8786;VDB=0.361007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.9:6656901 chr09:006656901 0 W/6656901-6656901 FN3339-S SNP G -> A AC=1;AN=184;BQB=0.972267;DP=2815;DP4=1190,1541,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.84843e-07;MQSB=0.912766;RPB=0.939029;SGB=-17.8447;VDB=0.733779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.9:6660291 chr09:006660291 0 W/6660291-6660291 FN2681-S SNP C -> A AC=1;AN=200;BQB=0.94878;DP=5180;DP4=2862,2006,19,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.65936e-17;MQSB=0.69417;RPB=0.751652;SGB=123.342;VDB=0.751485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.9:6661976 chr09:006661976 0 W/6661976-6661976 FN3568-S SNP A -> G AC=1;AN=188;BQB=0.979228;DP=2658;DP4=1122,1460,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17068e-12;MQSB=0.976921;RPB=0.997489;SGB=94.4119;VDB=0.994331;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.9:6661977 chr09:006661977 0 W/6661977-6661977 FN859-S Single Base Substitution C-T INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1112-S.SNP.9:6680985 chr09:006680985 0 W/6680985-6680985 FN1112-S Single Base Substitution A-G INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1406-S.SNP.9:6684193 chr09:006684193 0 W/6684193-6684193 FN1406-S Single Base Substitution C-T INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN-292.SNP.9:6685438 chr09:006685438 0 W/6685438-6685438 FN-292 Single Base Substitution T-C INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1020-S.SNP.9:6689022 chr09:006689022 0 W/6689022-6689022 FN1020-S Single Base Substitution C-T INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1018-S.SNP.9:6692244 chr09:006692244 0 W/6692244-6692244 FN1018-S Single Base Substitution C-T INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN4074-S.SNP.9:6692597 chr09:006692597 0 W/6692597-6692597 FN4074-S SNP C -> T AC=1;AN=182;BQB=0.940042;DP=2800;DP4=1226,1502,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=21;MQ0F=0.296071;MQB=0.155941;MQSB=1.4999e-10;RPB=0.847965;SGB=75.6874;VDB=0.133597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.9:6698769 chr09:006698769 0 W/6698769-6698769 FN2297 SNP G -> A AC=2;AN=192;BQB=0.321791;DP=5538;DP4=2431,2663,14,23;HOB=0.0206163;ICB=0.494846;MQ=24;MQ0F=0.17082;MQB=0.0195619;MQSB=4.10122e-34;RPB=0.899231;SGB=-86.0356;VDB=0.914852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.9:6701922 chr09:006701922 0 W/6701922-6701922 FN2488 SNP T -> A AC=2;AN=200;BQB=0.53354;DP=4846;DP4=2472,1970,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.57024e-22;MQSB=0.254117;RPB=0.721637;SGB=86.7987;VDB=0.458919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.9:6707757 chr09:006707757 0 W/6707757-6707757 FN3803-S SNP G -> T AC=1;AN=190;BQB=0.988605;DP=2608;DP4=1398,1143,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1835e-09;MQSB=0.902594;RPB=0.848539;SGB=71.8647;VDB=0.97448;EFF=INTERGENIC(MODIFIER||||||||||1) FN790-S.SNP.9:6708624 chr09:006708624 0 W/6708624-6708624 FN790-S Single Base Substitution G-A INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN840-S.SNP.9:6708753 chr09:006708753 0 W/6708753-6708753 FN840-S Single Base Substitution T-G INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN-190.SNP.9:6710614 chr09:006710614 0 W/6710614-6710614 FN-190 Single Base Substitution T-A INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3981-S.SNP.9:6711410 chr09:006711410 0 W/6711410-6711410 FN3981-S SNP C -> A AC=1;AN=168;BQB=0.67593;DP=2430;DP4=1115,1160,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.16046e-08;MQSB=0.938753;RPB=0.323282;SGB=19.7539;VDB=0.83284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.9:6714202 chr09:006714202 0 W/6714202-6714202 FN2249-S SNP T -> C AC=1;AN=190;BQB=0.994662;DP=4784;DP4=2522,1892,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.565286;MQSB=0.0214001;RPB=0.928887;SGB=60.9777;VDB=0.886317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1310-S.SNP.9:6717190 chr09:006717190 0 W/6717190-6717190 FN1310-S Single Base Substitution C-T INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2535-S.SNP.9:6719864 chr09:006719864 0 W/6719864-6719864 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.981796;DP=4291;DP4=1971,2130,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.4914e-09;MQSB=0.998837;RPB=0.878451;SGB=77.1196;VDB=0.0237913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.9:6722121 chr09:006722121 0 W/6722121-6722121 FN1619-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g11940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN864-S.SNP.9:6725153 chr09:006725153 0 W/6725153-6725153 FN864-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g11940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN-190.SNP.9:6727422 chr09:006727422 0 W/6727422-6727422 FN-190 Single Base Substitution T-G INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3924-S.SNP.9:6728259 chr09:006728259 0 W/6728259-6728259 FN3924-S SNP T -> C AC=1;AN=158;BQB=0.997902;DP=2457;DP4=1254,1097,12,11;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=5.33636e-09;MQSB=0.760042;RPB=0.890961;SGB=40.4048;VDB=0.853405;EFF=INTRON(MODIFIER||||685|LOC_Os09g11950|protein_coding|CODING|LOC_Os09g11950.1|6|1) FN2204-S.SNP.9:6731309 chr09:006731309 0 W/6731309-6731309 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.0411533;DP=4939;DP4=2356,2293,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.32479e-05;MQSB=0.802893;RPB=0.987698;SGB=18.552;VDB=0.704797;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN-228 Single Base Substitution G-C INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1443-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN1443-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1731-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN1731-S SNP G -> C AC=2;AN=188;BQB=0.80972;DP=4040;DP4=1954,2035,13,25;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=3.10747e-11;MQSB=0.0170568;RPB=0.995386;SGB=82.0286;VDB=0.161748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN2308 SNP G -> C AC=1;AN=192;BQB=0.976066;DP=5084;DP4=2439,2390,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0;MQB=0.000480251;MQSB=3.21006e-07;RPB=0.468206;SGB=50.4731;VDB=0.9278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN2419 SNP G -> C AC=1;AN=200;BQB=0.812216;DP=4747;DP4=2281,2194,19,12;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0;MQB=1.02015e-07;MQSB=0.000262505;RPB=0.873854;SGB=101.557;VDB=0.506223;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN2713-S SNP G -> C AC=2;AN=200;BQB=0.64899;DP=4703;DP4=2289,2153,28,30;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0;MQB=2.32367e-11;MQSB=0.00402967;RPB=0.987622;SGB=136.297;VDB=0.0887716;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN3817-S SNP G -> C AC=1;AN=190;BQB=0.972261;DP=2497;DP4=1162,1191,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=0.0864934;MQSB=0.0530645;RPB=0.899739;SGB=26.3271;VDB=0.0536475;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN4126-S SNP G -> C AC=1;AN=182;BQB=0.973753;DP=2511;DP4=1205,1171,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0;MQB=0.00031467;MQSB=0.0176651;RPB=0.945384;SGB=32.1169;VDB=0.877004;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN483-S Single Base Substitution G-C INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN745-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN745-S Single Base Substitution G-C INTERGENIC HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN845-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN845-S Single Base Substitution G-C INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN881-S.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN881-S Single Base Substitution G-C INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN_769-4-1.SNP.9:6735634 chr09:006735634 0 W/6735634-6735634 FN_769-4-1 Single Base Substitution G-C Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1262-S.SNP.9:6738443 chr09:006738443 0 W/6738443-6738443 FN1262-S Single Base Substitution G-A INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3779-S.SNP.9:6740015 chr09:006740015 0 W/6740015-6740015 FN3779-S SNP T -> A AC=2;AN=190;BQB=0.276855;DP=2599;DP4=1213,1282,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.32406e-11;MQSB=0.966728;RPB=0.655683;SGB=100.07;VDB=0.349203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.9:6740123 chr09:006740123 0 W/6740123-6740123 FN2313 SNP A -> G AC=1;AN=192;BQB=0.947927;DP=4677;DP4=2315,2074,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.29397e-06;MQSB=0.637249;RPB=0.155654;SGB=32.6514;VDB=0.117464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.9:6742278 chr09:006742278 0 W/6742278-6742278 FN2370 SNP C -> G AC=1;AN=192;BQB=0.339938;DP=3970;DP4=1906,1846,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000251889;MQB=0.000144105;MQSB=4.6853e-06;RPB=0.801578;SGB=44.6462;VDB=0.753144;EFF=INTERGENIC(MODIFIER||||||||||1) FN-158.SNP.9:6743980 chr09:006743980 0 W/6743980-6743980 FN-158 Single Base Substitution C-T INTERGENIC HET SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN1476-S.SNP.9:6750842 chr09:006750842 0 W/6750842-6750842 FN1476-S Single Base Substitution T-G INTERGENIC Homo SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-408.SNP.9:6751112 chr09:006751112 0 W/6751112-6751112 FN-408 Single Base Substitution C-G INTERGENIC HET SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN-412.SNP.9:6751556 chr09:006751556 0 W/6751556-6751556 FN-412 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g11980 retrotransposon protein, putative, Ty1-copia subclass SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN2355.SNP.9:6752396 chr09:006752396 0 W/6752396-6752396 FN2355 SNP T -> G AC=1;AN=192;BQB=0.918365;DP=5018;DP4=2486,2283,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199283;MQB=1.41624e-08;MQSB=0.900498;RPB=0.867676;SGB=28.9139;VDB=0.312584;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A50|361|LOC_Os09g11980|protein_coding|CODING|LOC_Os09g11980.1|3|1) FN2398.SNP.9:6755067 chr09:006755067 0 W/6755067-6755067 FN2398 SNP G -> C AC=1;AN=200;BQB=0.955932;DP=5142;DP4=2409,2440,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86016e-12;MQSB=0.801401;RPB=0.155291;SGB=37.3004;VDB=0.188456;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.9:6755846 chr09:006755846 0 W/6755846-6755846 FN801-S Single Base Substitution T-A INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN3455-S.SNP.9:6758059 chr09:006758059 0 W/6758059-6758059 FN3455-S SNP C -> A AC=1;AN=184;BQB=0.978964;DP=1981;DP4=748,1132,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=7.37141e-06;MQSB=4.05594e-30;RPB=0.866954;SGB=35.7479;VDB=0.488007;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.9:6758060 chr09:006758060 0 W/6758060-6758060 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.915756;DP=1972;DP4=764,1134,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.94869e-05;MQSB=1.24619e-29;RPB=0.940254;SGB=48.7425;VDB=0.462963;EFF=INTERGENIC(MODIFIER||||||||||1) FN-246.SNP.9:6759114 chr09:006759114 0 W/6759114-6759114 FN-246 Single Base Substitution G-C INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN3771-S.SNP.9:6764353 chr09:006764353 0 W/6764353-6764353 FN3771-S SNP G -> T AC=1;AN=190;BQB=0.509591;DP=2749;DP4=1342,1304,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.6696e-08;MQSB=0.994391;RPB=0.935155;SGB=2.55724;VDB=0.329867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.9:6775321 chr09:006775321 0 W/6775321-6775321 FN1394-S Single Base Substitution C-A INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2421.SNP.9:6783725 chr09:006783725 0 W/6783725-6783725 FN2421 SNP A -> G AC=1;AN=200;BQB=0.876163;DP=4035;DP4=1909,1903,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22158e-09;MQSB=0.985538;RPB=0.977618;SGB=37.3004;VDB=0.957049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.9:6788620 chr09:006788620 0 W/6788620-6788620 FN2130-S SNP G -> T AC=1;AN=168;BQB=0.0899885;DP=3546;DP4=1484,2024,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.69247e-09;MQSB=0.744016;RPB=0.975463;SGB=9.91396;VDB=0.876126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.9:6792048 chr09:006792048 0 W/6792048-6792048 FN2364 SNP T -> C AC=1;AN=192;BQB=0.517512;DP=5289;DP4=2568,2438,8,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.06197e-12;MQSB=0.992504;RPB=0.979495;SGB=51.9931;VDB=0.439977;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.9:6794902 chr09:006794902 0 W/6794902-6794902 FN2774-S SNP A -> G AC=2;AN=198;BQB=0.227341;DP=3928;DP4=1620,1962,27,34;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.43832e-28;MQSB=0.251895;RPB=0.98441;SGB=93.7442;VDB=0.100549;EFF=INTERGENIC(MODIFIER||||||||||1) FN1730-S.SNP.9:6795163 chr09:006795163 0 W/6795163-6795163 FN1730-S SNP C -> G AC=2;AN=188;BQB=0.711114;DP=2980;DP4=1829,1098,28,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.98727e-16;MQSB=0.914207;RPB=0.652847;SGB=-91.0366;VDB=0.0614674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.9:6804786 chr09:006804786 0 W/6804786-6804786 FN3958-S SNP G -> C AC=1;AN=168;BQB=0.522623;DP=2760;DP4=1500,1137,12,2;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.00731195;MQSB=0.0143634;RPB=0.717293;SGB=56.6036;VDB=0.191902;EFF=INTRON(MODIFIER||||401|LOC_Os09g12050|protein_coding|CODING|LOC_Os09g12050.1|2|1) FN491-S.SNP.9:6807172 chr09:006807172 0 W/6807172-6807172 FN491-S Single Base Substitution C-T INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN3105-S.SNP.9:6812314 chr09:006812314 0 W/6812314-6812314 FN3105-S SNP T -> G AC=2;AN=184;BQB=0.882574;DP=2716;DP4=961,1432,8,21;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.35571e-11;MQSB=0.883162;RPB=0.595241;SGB=-109.002;VDB=0.259058;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.9:6814098 chr09:006814098 0 W/6814098-6814098 FN690-S Single Base Substitution G-C INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN573-S.SNP.9:6814999 chr09:006814999 0 W/6814999-6814999 FN573-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g12070 retrotransposon protein, putative, unclassified, expressed SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3974-S.SNP.9:6819892 chr09:006819892 0 W/6819892-6819892 FN3974-S SNP T -> G AC=1;AN=168;BQB=0.66975;DP=3203;DP4=1550,1538,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.66115e-08;MQSB=0.79282;RPB=0.870172;SGB=5.62151;VDB=0.191126;EFF=INTRON(MODIFIER||||711|LOC_Os09g12080|protein_coding|CODING|LOC_Os09g12080.1|2|1) FN792-S.SNP.9:6824598 chr09:006824598 0 W/6824598-6824598 FN792-S Single Base Substitution T-G INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN3579-S.SNP.9:6833283 chr09:006833283 0 W/6833283-6833283 FN3579-S SNP T -> A AC=1;AN=188;BQB=0.962733;DP=2237;DP4=904,1211,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.24574e-06;MQSB=0.987106;RPB=0.600495;SGB=39.8925;VDB=0.0797975;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.9:6834632 chr09:006834632 0 W/6834632-6834632 FN618-S Single Base Substitution C-G INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN-56.SNP.9:6839860 chr09:006839860 0 W/6839860-6839860 FN-56 Single Base Substitution C-G INTRON HOMO SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN896-S.SNP.9:6855224 chr09:006855224 0 W/6855224-6855224 FN896-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2535-S.SNP.9:6859100 chr09:006859100 0 W/6859100-6859100 FN2535-S SNP C -> A AC=1;AN=198;BQB=0.0544396;DP=3489;DP4=1585,1643,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.248495;MQB=0.276142;MQSB=0.0168017;RPB=0.626118;SGB=32.9588;VDB=0.98924;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P1524T|1942|LOC_Os09g12130|protein_coding|CODING|LOC_Os09g12130.1|4|1) FN3897-S.SNP.9:6861022 chr09:006861022 0 W/6861022-6861022 FN3897-S SNP G -> C AC=2;AN=158;BQB=0.410015;DP=2642;DP4=1236,1253,29,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000378501;MQB=3.57879e-28;MQSB=0.912669;RPB=0.908426;SGB=193.876;VDB=0.185496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D984E|996|LOC_Os09g12140|protein_coding|CODING|LOC_Os09g12140.1|3|1) FN1230-S.SNP.9:6868342 chr09:006868342 0 W/6868342-6868342 FN1230-S Single Base Substitution A-T INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1436-S.SNP.9:6871123 chr09:006871123 0 W/6871123-6871123 FN1436-S Single Base Substitution G-C INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN-410.SNP.9:6872083 chr09:006872083 0 W/6872083-6872083 FN-410 Single Base Substitution C-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.9:6872083 chr09:006872083 0 W/6872083-6872083 FN410-S Single Base Substitution C-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN-147.SNP.9:6878832 chr09:006878832 0 W/6878832-6878832 FN-147 Single Base Substitution G-A INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN1475-S.SNP.9:6880689 chr09:006880689 0 W/6880689-6880689 FN1475-S Single Base Substitution T-A INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3799-S.SNP.9:6881049 chr09:006881049 0 W/6881049-6881049 FN3799-S SNP C -> T AC=1;AN=190;BQB=0.71707;DP=2156;DP4=655,1417,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000615648;MQSB=0.828875;RPB=0.522829;SGB=35.4339;VDB=0.721112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.9:6881049 chr09:006881049 0 W/6881049-6881049 FN3861-S SNP C -> T AC=2;AN=158;BQB=0.9052;DP=1921;DP4=622,1218,6,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.72075e-08;MQSB=0.983198;RPB=0.924829;SGB=34.0735;VDB=0.786315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.9:6882753 chr09:006882753 0 W/6882753-6882753 FN2784-S SNP T -> C AC=1;AN=198;BQB=0.781144;DP=4225;DP4=2056,1910,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0942012;MQB=0.786201;MQSB=0;RPB=0.771276;SGB=76.1002;VDB=0.355058;EFF=INTRON(MODIFIER||||145|LOC_Os09g12160|protein_coding|CODING|LOC_Os09g12160.1|1|1) FN2596-S.SNP.9:6889303 chr09:006889303 0 W/6889303-6889303 FN2596-S SNP G -> A AC=1;AN=188;BQB=0.955294;DP=3708;DP4=1733,1732,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.91389e-11;MQSB=0.996281;RPB=0.0498863;SGB=77.1196;VDB=0.0148393;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A769V|998|LOC_Os09g12190|protein_coding|CODING|LOC_Os09g12190.1|3|1) W470-2-1.SNP.9:6889832 chr09:006889832 0 W/6889832-6889832 W470-2-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g12190 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-120.SNP.9:6892164 chr09:006892164 0 W/6892164-6892164 FN-120 Single Base Substitution A-C INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN3394-S.SNP.9:6892318 chr09:006892318 0 W/6892318-6892318 FN3394-S SNP C -> T AC=2;AN=184;BQB=0.990487;DP=2837;DP4=1409,1288,16,14;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0070497;MQB=0.0146846;MQSB=0.040769;RPB=0.952777;SGB=130.135;VDB=0.534511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.9:6892745 chr09:006892745 0 W/6892745-6892745 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.624046;DP=2424;DP4=1138,1192,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.93449e-07;MQSB=0.431937;RPB=0.991654;SGB=48.7425;VDB=0.622197;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.9:6892925 chr09:006892925 0 W/6892925-6892925 FN3343-S SNP A -> G AC=2;AN=184;BQB=0.85871;DP=2898;DP4=1292,1440,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.73413e-17;MQSB=0.208708;RPB=0.999042;SGB=58.5801;VDB=0.352913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.9:6893877 chr09:006893877 0 W/6893877-6893877 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.989445;DP=2380;DP4=1218,1070,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.31753e-06;MQSB=0.896667;RPB=0.638271;SGB=38.3284;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.9:6895223 chr09:006895223 0 W/6895223-6895223 FN2767-S SNP G -> A AC=1;AN=198;BQB=0.859852;DP=4269;DP4=1935,2048,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.92755e-08;MQSB=0.987061;RPB=0.78021;SGB=39.7248;VDB=0.709917;EFF=INTERGENIC(MODIFIER||||||||||1) FN4224-S.SNP.9:6895230 chr09:006895230 0 W/6895230-6895230 FN4224-S SNP G -> A AC=1;AN=170;BQB=0.960537;DP=2402;DP4=1049,1281,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.02982e-06;MQSB=0.994337;RPB=0.618479;SGB=38.987;VDB=0.560195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.9:6896448 chr09:006896448 0 W/6896448-6896448 FN3297-S SNP C -> A AC=1;AN=184;BQB=0.953694;DP=2495;DP4=1251,1157,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60445e-06;MQSB=0.947147;RPB=0.672212;SGB=35.1773;VDB=0.0315723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1678-S.SNP.9:6900597 chr09:006900597 0 W/6900597-6900597 FN1678-S SNP G -> A AC=2;AN=188;BQB=0.686526;DP=3792;DP4=2069,1660,23,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.39093e-17;MQSB=0.999736;RPB=0.607912;SGB=36.4041;VDB=0.408725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.9:6901690 chr09:006901690 0 W/6901690-6901690 FN1363-S Single Base Substitution A-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN4071-S.SNP.9:6906160 chr09:006906160 0 W/6906160-6906160 FN4071-S SNP G -> A AC=2;AN=182;BQB=0.954264;DP=3127;DP4=1168,1847,10,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.08733e-19;MQSB=0.999538;RPB=0.252204;SGB=68.3396;VDB=0.371374;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.9:6918464 chr09:006918464 0 W/6918464-6918464 FN1140-S Single Base Substitution G-A INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1140-S.SNP.9:6918465 chr09:006918465 0 W/6918465-6918465 FN1140-S Single Base Substitution C-T INTRON HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN814-S.SNP.9:6919438 chr09:006919438 0 W/6919438-6919438 FN814-S Single Base Substitution C-G INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN587-S.SNP.9:6922213 chr09:006922213 0 W/6922213-6922213 FN587-S Single Base Substitution C-T INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN977-S.SNP.9:6926145 chr09:006926145 0 W/6926145-6926145 FN977-S Single Base Substitution C-G INTERGENIC HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN4116-S.SNP.9:6931919 chr09:006931919 0 W/6931919-6931919 FN4116-S SNP C -> T AC=1;AN=182;BQB=0.993766;DP=2993;DP4=1653,1268,4,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.56214e-11;MQSB=0.851645;RPB=0.997865;SGB=71.1765;VDB=0.80057;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.9:6931920 chr09:006931920 0 W/6931920-6931920 FN4116-S SNP G -> T AC=1;AN=182;BQB=0.940099;DP=2976;DP4=1637,1256,4,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.2962e-10;MQSB=0.939722;RPB=0.834581;SGB=62.1548;VDB=0.780493;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.9:6935241 chr09:006935241 0 W/6935241-6935241 FN3793-S SNP A -> G AC=1;AN=190;BQB=0.950648;DP=2665;DP4=1356,1220,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05283e-07;MQSB=0.74529;RPB=0.829712;SGB=44.5415;VDB=0.550602;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.9:6937312 chr09:006937312 0 W/6937312-6937312 FN3971-S SNP G -> A AC=2;AN=168;BQB=0.923015;DP=2399;DP4=1172,1116,5,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.9551e-09;MQSB=0.934879;RPB=0.968114;SGB=61.0344;VDB=0.802418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.9:6944672 chr09:006944672 0 W/6944672-6944672 FN2680-S SNP T -> C AC=1;AN=200;BQB=0.71775;DP=4618;DP4=2090,2340,18,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.89396e-19;MQSB=0.751424;RPB=0.618479;SGB=68.5625;VDB=0.0938475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.9:6945326 chr09:006945326 0 W/6945326-6945326 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.474865;DP=2214;DP4=996,1126,9,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.25079e-06;MQSB=0.944166;RPB=0.511696;SGB=27.3346;VDB=0.32632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.9:6951552 chr09:006951552 0 W/6951552-6951552 FN2779-S SNP A -> T AC=2;AN=198;BQB=0.978878;DP=4553;DP4=2181,2139,23,33;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.39797e-32;MQSB=0.970006;RPB=0.736336;SGB=69.964;VDB=0.207842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.9:6952954 chr09:006952954 0 W/6952954-6952954 FN3698-S SNP T -> C AC=2;AN=190;BQB=0.821398;DP=2773;DP4=1270,1385,10,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.67213e-11;MQSB=0.999025;RPB=0.771223;SGB=50.3161;VDB=0.402928;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.9:6959783 chr09:006959783 0 W/6959783-6959783 FN3774-S SNP C -> A AC=2;AN=190;BQB=0.991468;DP=2928;DP4=1156,1662,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.10632e-14;MQSB=0.979542;RPB=0.99888;SGB=103.742;VDB=0.914494;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.9:6964133 chr09:006964133 0 W/6964133-6964133 FN3285-S SNP T -> G AC=1;AN=184;BQB=0.985837;DP=3055;DP4=1533,1445,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4764e-09;MQSB=0.987609;RPB=0.717901;SGB=49.835;VDB=0.568889;EFF=INTERGENIC(MODIFIER||||||||||1) FN426-S.SNP.9:6966675 chr09:006966675 0 W/6966675-6966675 FN426-S Single Base Substitution C-T INTERGENIC HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN806-S.SNP.9:6967415 chr09:006967415 0 W/6967415-6967415 FN806-S Single Base Substitution A-G INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1071-S.SNP.9:6969945 chr09:006969945 0 W/6969945-6969945 FN1071-S Single Base Substitution A-C INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1319-S.SNP.9:6971537 chr09:006971537 0 W/6971537-6971537 FN1319-S Single Base Substitution T-C INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN3675-S.SNP.9:6972538 chr09:006972538 0 W/6972538-6972538 FN3675-S SNP A -> G AC=1;AN=190;BQB=0.981543;DP=2741;DP4=1197,1386,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10045e-09;MQSB=0.899028;RPB=0.956833;SGB=50.3161;VDB=0.941787;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.9:6975109 chr09:006975109 0 W/6975109-6975109 FN884-S Single Base Substitution A-T INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1282-S.SNP.9:6982883 chr09:006982883 0 W/6982883-6982883 FN1282-S Single Base Substitution C-T INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN3809-S.SNP.9:6983744 chr09:006983744 0 W/6983744-6983744 FN3809-S SNP G -> A AC=1;AN=190;BQB=0.898583;DP=2239;DP4=1003,1173,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000694311;MQSB=0.998464;RPB=0.653065;SGB=26.3271;VDB=0.806316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.9:6985518 chr09:006985518 0 W/6985518-6985518 FN2650-S SNP G -> T AC=1;AN=200;BQB=0.999609;DP=4499;DP4=2139,2109,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78787e-06;MQSB=0.242378;RPB=0.968426;SGB=35.8441;VDB=0.626335;EFF=INTERGENIC(MODIFIER||||||||||1) FN_769-4-1.SNP.9:6997151 chr09:006997151 0 W/6997151-6997151 FN_769-4-1 Single Base Substitution G-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN4117-S.SNP.9:6997817 chr09:006997817 0 W/6997817-6997817 FN4117-S SNP G -> A AC=1;AN=182;BQB=0.803932;DP=2360;DP4=1164,1086,6,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.20048e-09;MQSB=0.785231;RPB=0.669123;SGB=84.7091;VDB=0.462199;EFF=INTRON(MODIFIER||||915|LOC_Os09g12290|protein_coding|CODING|LOC_Os09g12290.1|16|1) FN621-S.SNP.9:7004595 chr09:007004595 0 W/7004595-7004595 FN621-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g12290 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN-154.SNP.9:7010494 chr09:007010494 0 W/7010494-7010494 FN-154 Single Base Substitution A-T INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN2146-S.SNP.9:7026274 chr09:007026274 0 W/7026274-7026274 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.0107454;DP=2668;DP4=1436,1184,14,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.97773e-05;MQSB=0.931794;RPB=0.344374;SGB=-37.2282;VDB=0.273955;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.9:7030864 chr09:007030864 0 W/7030864-7030864 FN4074-S SNP G -> A AC=1;AN=182;BQB=0.804138;DP=3339;DP4=1695,1594,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00269542;MQB=8.82425e-07;MQSB=0.880993;RPB=0.0270702;SGB=39.1386;VDB=0.735281;EFF=INTRON(MODIFIER||||1178|LOC_Os09g12330|protein_coding|CODING|LOC_Os09g12330.1|1|1) FN2162-S.SNP.9:7032604 chr09:007032604 0 W/7032604-7032604 FN2162-S SNP G -> A AC=1;AN=168;BQB=0.0366883;DP=3261;DP4=1535,1688,7,17;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.092303;MQB=0.995003;MQSB=0.110049;RPB=0.0325611;SGB=-126.487;VDB=0.00464159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.9:7032672 chr09:007032672 0 W/7032672-7032672 FN1682-S SNP T -> A AC=2;AN=188;BQB=0.198989;DP=2859;DP4=1281,1511,26,23;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.118573;MQB=0.0630062;MQSB=0.057114;RPB=0.985259;SGB=-302.803;VDB=0.00458177;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.9:7033115 chr09:007033115 0 W/7033115-7033115 FN1061-S Single Base Substitution A-G INTERGENIC HOMO SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-184.SNP.9:7034290 chr09:007034290 0 W/7034290-7034290 FN-184 Single Base Substitution A-T INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1486-S.SNP.9:7034405 chr09:007034405 0 W/7034405-7034405 FN1486-S Single Base Substitution C-T INTERGENIC HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN1163-S.SNP.9:7038180 chr09:007038180 0 W/7038180-7038180 FN1163-S Single Base Substitution G-A INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2788-S.SNP.9:7046247 chr09:007046247 0 W/7046247-7046247 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.0881522;DP=4097;DP4=1910,1914,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.60173e-19;MQSB=0.937744;RPB=0.678448;SGB=65.676;VDB=0.628247;EFF=INTRON(MODIFIER||||666|LOC_Os09g12350|protein_coding|CODING|LOC_Os09g12350.1|1|1) FN961-S.SNP.9:7048031 chr09:007048031 0 W/7048031-7048031 FN961-S Single Base Substitution G-A INTRON HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2080-S.SNP.9:7057744 chr09:007057744 0 W/7057744-7057744 FN2080-S SNP A -> G AC=2;AN=168;BQB=0.0769777;DP=3956;DP4=1932,1933,25,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.21841e-30;MQSB=0.980005;RPB=0.0122898;SGB=-408.837;VDB=0.151449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.9:7060859 chr09:007060859 0 W/7060859-7060859 FN2134-S SNP A -> T AC=2;AN=168;BQB=0.418755;DP=3687;DP4=1801,1793,30,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.30519e-24;MQSB=0.896308;RPB=0.52777;SGB=-59.4263;VDB=0.719622;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.9:7063039 chr09:007063039 0 W/7063039-7063039 FN933-S Single Base Substitution C-G INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2200-S.SNP.9:7063048 chr09:007063048 0 W/7063048-7063048 FN2200-S SNP G -> A AC=2;AN=190;BQB=0.97568;DP=4668;DP4=2150,2157,23,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000214225;MQB=1.11183e-17;MQSB=0.889401;RPB=0.692145;SGB=77.2911;VDB=0.563514;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.9:7064965 chr09:007064965 0 W/7064965-7064965 FN3979-S SNP C -> T AC=2;AN=168;BQB=0.812162;DP=1215;DP4=391,714,3,16;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=0.000168171;MQSB=0.000482703;RPB=0.986536;SGB=55.3328;VDB=0.3141;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.9:7066170 chr09:007066170 0 W/7066170-7066170 FN443-S Single Base Substitution C-A INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2729-S.SNP.9:7068746 chr09:007068746 0 W/7068746-7068746 FN2729-S SNP G -> T AC=1;AN=200;BQB=0.986858;DP=2456;DP4=353,1949,2,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.62093e-05;MQSB=0.977941;RPB=0.999573;SGB=-0.141083;VDB=0.229729;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.9:7072368 chr09:007072368 0 W/7072368-7072368 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.281794;DP=3881;DP4=1832,1887,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000257666;MQB=0.000908849;MQSB=0.978341;RPB=0.35326;SGB=35.7638;VDB=0.615174;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.9:7075511 chr09:007075511 0 W/7075511-7075511 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.676301;DP=4794;DP4=2543,2046,2,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00166875;MQB=2.65215e-05;MQSB=0.605106;RPB=0.0827866;SGB=11.2488;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.9:7082778 chr09:007082778 0 W/7082778-7082778 FN576-S Single Base Substitution T-G INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN796-S.SNP.9:7083411 chr09:007083411 0 W/7083411-7083411 FN796-S Single Base Substitution C-T INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN460-S.SNP.9:7083666 chr09:007083666 0 W/7083666-7083666 FN460-S Single Base Substitution G-A INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1057-S.SNP.9:7085879 chr09:007085879 0 W/7085879-7085879 FN1057-S Single Base Substitution T-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1610-S.SNP.9:7089383 chr09:007089383 0 W/7089383-7089383 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2612-S.SNP.9:7090139 chr09:007090139 0 W/7090139-7090139 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.950773;DP=4341;DP4=2102,1970,18,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.035e-20;MQSB=0.593155;RPB=0.342173;SGB=81.2467;VDB=0.271893;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.9:7091073 chr09:007091073 0 W/7091073-7091073 FN568-S Single Base Substitution A-T INTERGENIC HOMO SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN804-S.SNP.9:7093626 chr09:007093626 0 W/7093626-7093626 FN804-S Single Base Substitution G-A INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-327.SNP.9:7095537 chr09:007095537 0 W/7095537-7095537 FN-327 Single Base Substitution T-C INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN3911-S.SNP.9:7096861 chr09:007096861 0 W/7096861-7096861 FN3911-S SNP G -> T AC=2;AN=158;BQB=0.790126;DP=2046;DP4=966,998,13,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.07125e-10;MQSB=0.846385;RPB=0.0310605;SGB=6.19449;VDB=0.0125852;EFF=INTRON(MODIFIER||||388|LOC_Os09g12410|protein_coding|CODING|LOC_Os09g12410.1|2|1) FN2621-S.SNP.9:7096952 chr09:007096952 0 W/7096952-7096952 FN2621-S SNP C -> A AC=1;AN=200;BQB=0.890243;DP=4275;DP4=2255,1718,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0511e-11;MQSB=0.963857;RPB=0.46174;SGB=42.5108;VDB=0.19667;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P351|388|LOC_Os09g12410|protein_coding|CODING|LOC_Os09g12410.1|3|1) FN498-S.SNP.9:7100340 chr09:007100340 0 W/7100340-7100340 FN498-S Single Base Substitution A-G INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1103-S.SNP.9:7105022 chr09:007105022 0 W/7105022-7105022 FN1103-S Single Base Substitution A-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN-56.SNP.9:7107858 chr09:007107858 0 W/7107858-7107858 FN-56 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN2209-S.SNP.9:7108162 chr09:007108162 0 W/7108162-7108162 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.920988;DP=2955;DP4=1417,1271,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.124873;MQB=0.926339;MQSB=0;RPB=0.834703;SGB=13.4442;VDB=0.176923;EFF=INTRON(MODIFIER||||1993|LOC_Os09g12420|protein_coding|CODING|LOC_Os09g12420.1|9|1) FN3355-S.SNP.9:7126269 chr09:007126269 0 W/7126269-7126269 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.953591;DP=4439;DP4=2263,2060,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.413156;MQB=0.0767603;MQSB=0;RPB=0.90547;SGB=57.786;VDB=0.626266;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.9:7128655 chr09:007128655 0 W/7128655-7128655 FN462-S Single Base Substitution A-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1401-S.SNP.9:7129711 chr09:007129711 0 W/7129711-7129711 FN1401-S Single Base Substitution C-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2668-S.SNP.9:7130343 chr09:007130343 0 W/7130343-7130343 FN2668-S SNP A -> G AC=1;AN=200;BQB=0.704798;DP=4664;DP4=2083,2285,10,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92497e-14;MQSB=0.999562;RPB=0.883065;SGB=-40.4483;VDB=0.889373;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.9:7133786 chr09:007133786 0 W/7133786-7133786 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.967334;DP=2552;DP4=1153,1327,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=5.67288e-07;MQSB=0.0150329;RPB=0.463406;SGB=78.9707;VDB=0.665106;EFF=INTRON(MODIFIER||||1238|LOC_Os09g12480|protein_coding|CODING|LOC_Os09g12480.1|16|1) FN930-S.SNP.9:7134511 chr09:007134511 0 W/7134511-7134511 FN930-S Single Base Substitution G-A INTRON HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1533-S.SNP.9:7136797 chr09:007136797 0 W/7136797-7136797 FN1533-S Single Base Substitution T-A INTRON HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1532-S.SNP.9:7137878 chr09:007137878 0 W/7137878-7137878 FN1532-S Single Base Substitution G-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN759-S.SNP.9:7142066 chr09:007142066 0 W/7142066-7142066 FN759-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g12480 ulp1 protease family, C-terminal catalytic domain containing protein, expressed SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. W466-5-1.SNP.9:7144424 chr09:007144424 0 W/7144424-7144424 W466-5-1 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g12480 ulp1 protease family, C-terminal catalytic domain containing protein, expressed SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3283-S.SNP.9:7147238 chr09:007147238 0 W/7147238-7147238 FN3283-S SNP G -> A AC=1;AN=184;BQB=0.257963;DP=2316;DP4=1276,959,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26375e-06;MQSB=0.993155;RPB=0.980164;SGB=-17.8447;VDB=0.971487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.9:7152524 chr09:007152524 0 W/7152524-7152524 FN2281 SNP C -> A AC=2;AN=192;BQB=0.989042;DP=5130;DP4=2185,2532,37,31;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00467836;MQB=6.19048e-23;MQSB=0.0151942;RPB=0.592271;SGB=232.255;VDB=0.430189;EFF=INTRON(MODIFIER||||485|LOC_Os09g12490|protein_coding|CODING|LOC_Os09g12490.1|2|1) FN3527-S.SNP.9:7161919 chr09:007161919 0 W/7161919-7161919 FN3527-S SNP G -> C AC=1;AN=188;BQB=0.931507;DP=2850;DP4=1353,1423,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37107e-05;MQSB=0.994929;RPB=0.339943;SGB=39.8925;VDB=0.192198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.9:7168502 chr09:007168502 0 W/7168502-7168502 FN2151-S SNP A -> T AC=1;AN=168;BQB=0.999246;DP=4093;DP4=2184,1867,16,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.22514e-13;MQSB=0.886793;RPB=0.657405;SGB=14.2064;VDB=0.581413;EFF=INTRON(MODIFIER||||564|LOC_Os09g12500|protein_coding|CODING|LOC_Os09g12500.1|2|1),INTRON(MODIFIER||||564|LOC_Os09g12500|protein_coding|CODING|LOC_Os09g12500.2|2|1) FN1251-S.SNP.9:7172869 chr09:007172869 0 W/7172869-7172869 FN1251-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g12510 expressed protein SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3708-S.SNP.9:7175882 chr09:007175882 0 W/7175882-7175882 FN3708-S SNP G -> T AC=1;AN=190;BQB=0.356534;DP=2699;DP4=1210,1403,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000370508;MQB=0.00066164;MQSB=0.150249;RPB=0.915971;SGB=25.439;VDB=0.456924;EFF=INTERGENIC(MODIFIER||||||||||1) FN940-S.SNP.9:7179798 chr09:007179798 0 W/7179798-7179798 FN940-S Single Base Substitution G-A INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2481.SNP.9:7179932 chr09:007179932 0 W/7179932-7179932 FN2481 SNP A -> T AC=1;AN=200;BQB=0.417723;DP=3385;DP4=1274,1434,6,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=8.35764e-07;MQSB=0.593846;RPB=0.825316;SGB=-15.5309;VDB=0.0469434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.9:7183674 chr09:007183674 0 W/7183674-7183674 FN3627-S SNP A -> G AC=1;AN=190;BQB=0.979319;DP=2818;DP4=1357,1397,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.10239e-07;MQSB=0.999988;RPB=0.95642;SGB=39.9877;VDB=0.234935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.9:7197707 chr09:007197707 0 W/7197707-7197707 FN1665-S Single Base Substitution A-T INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN-308.SNP.9:7218121 chr09:007218121 0 W/7218121-7218121 FN-308 Single Base Substitution T-C INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN896-S.SNP.9:7231483 chr09:007231483 0 W/7231483-7231483 FN896-S Single Base Substitution T-C INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN389-S.SNP.9:7241057 chr09:007241057 0 W/7241057-7241057 FN389-S Single Base Substitution G-T STOP_GAINED HOMO LOC_Os09g12650 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN796-S.SNP.9:7259483 chr09:007259483 0 W/7259483-7259483 FN796-S Single Base Substitution C-G INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN-141.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN-141 Single Base Substitution T-C INTERGENIC HET SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN-218.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN-218 Single Base Substitution T-C INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-272.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN-272 Single Base Substitution T-C INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1557-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN1557-S Single Base Substitution T-C INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2205-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN2205-S SNP T -> C AC=1;AN=190;BQB=0.896897;DP=4708;DP4=2274,2107,10,22;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0;MQB=1.69107e-05;MQSB=0.18517;RPB=0.840552;SGB=30.527;VDB=0.0136338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3999-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN3999-S SNP T -> C AC=2;AN=168;BQB=0.989706;DP=2339;DP4=1020,1189,5,3;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0;MQB=0.00166496;MQSB=0.00184185;RPB=0.946644;SGB=30.0193;VDB=0.742256;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN497-S Single Base Substitution T-C INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN756-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN756-S Single Base Substitution T-C INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN895-S.SNP.9:7260586 chr09:007260586 0 W/7260586-7260586 FN895-S Single Base Substitution T-C INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN-71.SNP.9:7260839 chr09:007260839 0 W/7260839-7260839 FN-71 Single Base Substitution G-A INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN320-S.SNP.9:7275568 chr09:007275568 0 W/7275568-7275568 FN320-S Single Base Substitution T-A INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN1419-S.SNP.9:7284780 chr09:007284780 0 W/7284780-7284780 FN1419-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-108.SNP.9:7289668 chr09:007289668 0 W/7289668-7289668 FN-108 Single Base Substitution C-T INTERGENIC HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN979-S.SNP.9:7291352 chr09:007291352 0 W/7291352-7291352 FN979-S Single Base Substitution G-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2272-S.SNP.9:7291567 chr09:007291567 0 W/7291567-7291567 FN2272-S SNP A -> G AC=2;AN=190;BQB=0.999188;DP=5028;DP4=2310,2324,31,31;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0;MQB=3.43546e-25;MQSB=0.997531;RPB=0.294465;SGB=143.692;VDB=0.600062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.9:7299822 chr09:007299822 0 W/7299822-7299822 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.781484;DP=4007;DP4=1861,1961,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=7.8382e-07;MQSB=0.00281224;RPB=0.931097;SGB=50.9344;VDB=0.590847;EFF=INTRON(MODIFIER||||1005|LOC_Os09g12730|protein_coding|CODING|LOC_Os09g12730.1|2|1),INTRON(MODIFIER||||1005|LOC_Os09g12730|protein_coding|CODING|LOC_Os09g12730.2|2|1) FN-154.SNP.9:7301809 chr09:007301809 0 W/7301809-7301809 FN-154 Single Base Substitution T-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN1255-S.SNP.9:7306124 chr09:007306124 0 W/7306124-7306124 FN1255-S Single Base Substitution G-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2593-S.SNP.9:7306434 chr09:007306434 0 W/7306434-7306434 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.983079;DP=4518;DP4=2066,2188,21,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.86898e-17;MQSB=0.87669;RPB=0.992908;SGB=70.8662;VDB=0.0551638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.9:7306788 chr09:007306788 0 W/7306788-7306788 FN3773-S SNP G -> A AC=1;AN=190;BQB=0.986098;DP=2932;DP4=1268,1549,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00102319;MQB=3.679e-08;MQSB=0.734847;RPB=0.805808;SGB=62.7569;VDB=0.821097;EFF=INTRON(MODIFIER||||133|LOC_Os09g12740|protein_coding|CODING|LOC_Os09g12740.1|1|1) FN2426.SNP.9:7321733 chr09:007321733 0 W/7321733-7321733 FN2426 SNP G -> C AC=1;AN=200;BQB=0.514995;DP=4491;DP4=2320,1935,11,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.16519e-11;MQSB=0.196493;RPB=0.581972;SGB=32.0901;VDB=0.551262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K170N|250|LOC_Os09g12750|protein_coding|CODING|LOC_Os09g12750.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K59N|139|LOC_Os09g12750|protein_coding|CODING|LOC_Os09g12750.2|5|1) FN-116.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN-116 Single Base Substitution G-T INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN-73.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN-73 Single Base Substitution G-T INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1655-S.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN1655-S Single Base Substitution G-T INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN2149-S SNP G -> T AC=1;AN=168;BQB=0.00979739;DP=2584;DP4=1322,1228,9,20;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00928793;MQB=0.17551;MQSB=8.09525e-08;RPB=0.900299;SGB=-211.183;VDB=0.568363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN2322 SNP G -> T AC=1;AN=192;BQB=0.997667;DP=4553;DP4=1971,2310,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0232814;MQB=2.93284e-05;MQSB=5.62289e-19;RPB=0.210656;SGB=-77.4217;VDB=0.351303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN2411 SNP G -> T AC=2;AN=200;BQB=0.981944;DP=4378;DP4=1729,2366,18,37;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0171311;MQB=1.1646e-05;MQSB=2.17718e-14;RPB=0.986652;SGB=247.682;VDB=0.562921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN2675-S SNP G -> T AC=2;AN=200;BQB=0.967666;DP=4417;DP4=1856,2292,21,18;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0190174;MQB=3.26994e-05;MQSB=3.73428e-15;RPB=0.997081;SGB=130.399;VDB=0.995662;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN564-S Single Base Substitution G-T INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN_552-1-1.SNP.9:7323076 chr09:007323076 0 W/7323076-7323076 FN_552-1-1 Single Base Substitution G-T HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN963-S.SNP.9:7323237 chr09:007323237 0 W/7323237-7323237 FN963-S Single Base Substitution T-A INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2684-S.SNP.9:7324107 chr09:007324107 0 W/7324107-7324107 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.0410758;DP=9383;DP4=4296,4605,10,11;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0;MQB=0.000542617;MQSB=2.70557e-05;RPB=0.395932;SGB=-36.8949;VDB=0.181629;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.9:7333019 chr09:007333019 0 W/7333019-7333019 FN469-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2687-S.SNP.9:7333416 chr09:007333416 0 W/7333416-7333416 FN2687-S SNP T -> G AC=1;AN=200;BQB=0.47787;DP=4573;DP4=2097,2286,6,9;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0;MQB=0.00391413;MQSB=0.00620855;RPB=0.71324;SGB=43.8747;VDB=0.55509;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.9:7337720 chr09:007337720 0 W/7337720-7337720 FN-334 Single Base Substitution T-A INTRON HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1685-S.SNP.9:7362807 chr09:007362807 0 W/7362807-7362807 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.479795;DP=1775;DP4=993,744,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0;MQB=0.618701;MQSB=0.909359;RPB=0.232868;SGB=-17.1729;VDB=0.153225;EFF=INTERGENIC(MODIFIER||||||||||1) FN-25.SNP.9:7364849 chr09:007364849 0 W/7364849-7364849 FN-25 Single Base Substitution T-C INTERGENIC Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN3832-S.SNP.9:7369616 chr09:007369616 0 W/7369616-7369616 FN3832-S SNP G -> C AC=1;AN=190;BQB=0.967969;DP=1945;DP4=1074,803,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.144987;MQB=0.937578;MQSB=3.79707e-20;RPB=0.954406;SGB=39.9877;VDB=0.610755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E859D|897|LOC_Os09g12810|protein_coding|CODING|LOC_Os09g12810.1|2|1) FN2620-S.SNP.9:7380322 chr09:007380322 0 W/7380322-7380322 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.142613;DP=4156;DP4=1837,1917,13,20;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0;MQB=3.05729e-11;MQSB=2.65763e-07;RPB=0.988298;SGB=108.456;VDB=0.455209;EFF=INTRON(MODIFIER||||546|LOC_Os09g12840|protein_coding|CODING|LOC_Os09g12840.1|1|1) FN2239-S.SNP.9:7382222 chr09:007382222 0 W/7382222-7382222 FN2239-S SNP G -> A AC=2;AN=190;BQB=0.565889;DP=4671;DP4=2532,1830,20,13;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=7.08788e-13;MQSB=0.191153;RPB=0.88862;SGB=107.178;VDB=0.161532;EFF=INTERGENIC(MODIFIER||||||||||1) FN-124.SNP.9:7388846 chr09:007388846 0 W/7388846-7388846 FN-124 Single Base Substitution C-G INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2284.SNP.9:7396019 chr09:007396019 0 W/7396019-7396019 FN2284 SNP C -> T AC=1;AN=192;BQB=0.681098;DP=4657;DP4=2421,2058,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0;MQB=0.0114707;MQSB=1.09976e-08;RPB=0.889313;SGB=21.4339;VDB=0.946114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.9:7410020 chr09:007410020 0 W/7410020-7410020 FN1506-S Single Base Substitution C-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1025-S.SNP.9:7414165 chr09:007414165 0 W/7414165-7414165 FN1025-S Single Base Substitution A-G INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2344.SNP.9:7415894 chr09:007415894 0 W/7415894-7415894 FN2344 SNP C -> T AC=1;AN=192;BQB=0.175324;DP=8656;DP4=3992,4249,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0427449;MQB=0.00143534;MQSB=2.13768e-37;RPB=0.272891;SGB=-43.1695;VDB=0.219908;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.9:7420194 chr09:007420194 0 W/7420194-7420194 FN1374-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2779-S.SNP.9:7426853 chr09:007426853 0 W/7426853-7426853 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.262685;DP=8067;DP4=4383,2979,36,27;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.00880129;MQB=3.15217e-06;MQSB=0.00424223;RPB=0.178088;SGB=-256.82;VDB=0.379722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.9:7427327 chr09:007427327 0 W/7427327-7427327 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.0722748;DP=6029;DP4=3530,2131,37,23;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0162548;MQB=2.2882e-08;MQSB=8.14617e-38;RPB=0.952555;SGB=141.507;VDB=0.248937;EFF=INTERGENIC(MODIFIER||||||||||1) FN3302-S.SNP.9:7427327 chr09:007427327 0 W/7427327-7427327 FN3302-S SNP A -> G AC=1;AN=184;BQB=0.722073;DP=3909;DP4=2423,1319,20,13;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0240471;MQB=0.000124306;MQSB=1.89179e-25;RPB=0.0833173;SGB=143.7;VDB=0.865481;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.9:7431645 chr09:007431645 0 W/7431645-7431645 FN2385 SNP A -> T AC=1;AN=192;BQB=0.885907;DP=4885;DP4=2224,2397,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.69547e-07;MQSB=0.999538;RPB=0.93016;SGB=8.91915;VDB=0.955781;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.9:7437579 chr09:007437579 0 W/7437579-7437579 FN4172-S SNP T -> A AC=2;AN=170;BQB=0.970574;DP=2451;DP4=1048,1019,11,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.34729e-08;MQSB=0.962263;RPB=0.76471;SGB=34.5398;VDB=0.586203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.9:7447645 chr09:007447645 0 W/7447645-7447645 FN3411-S SNP A -> T AC=2;AN=184;BQB=0.667295;DP=2619;DP4=1159,1346,12,8;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=8.43557e-09;MQSB=0.00300496;RPB=0.898434;SGB=60.4004;VDB=0.999654;EFF=INTERGENIC(MODIFIER||||||||||1) W252-6-1.SNP.9:7471360 chr09:007471360 0 W/7471360-7471360 W252-6-1 Single Base Substitution T-C INTRON HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3662-S.SNP.9:7474689 chr09:007474689 0 W/7474689-7474689 FN3662-S SNP C -> G AC=1;AN=190;BQB=0.751864;DP=2698;DP4=1306,1277,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0;MQB=1.24008e-06;MQSB=9.5925e-05;RPB=0.639444;SGB=71.8647;VDB=0.145409;EFF=INTRON(MODIFIER||||456|LOC_Os09g12970|protein_coding|CODING|LOC_Os09g12970.1|1|1) FN1395-S.SNP.9:7478305 chr09:007478305 0 W/7478305-7478305 FN1395-S Single Base Substitution C-T INTRON HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN416-S.SNP.9:7480231 chr09:007480231 0 W/7480231-7480231 FN416-S Single Base Substitution T-C INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3723-S.SNP.9:7486809 chr09:007486809 0 W/7486809-7486809 FN3723-S SNP G -> C AC=1;AN=190;BQB=0.984744;DP=2734;DP4=1458,1176,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00219459;MQB=0.000179628;MQSB=0.432863;RPB=0.925058;SGB=53.6492;VDB=0.37995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.9:7491172 chr09:007491172 0 W/7491172-7491172 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.964207;DP=2144;DP4=999,1071,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.54935e-10;MQSB=0.990793;RPB=0.976713;SGB=64.5449;VDB=0.0960125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.9:7491890 chr09:007491890 0 W/7491890-7491890 FN3850-S SNP A -> T AC=1;AN=158;BQB=0.989761;DP=2173;DP4=1038,984,5,2;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.00191645;MQSB=0.00019831;RPB=0.999519;SGB=13.8578;VDB=0.601916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.9:7497551 chr09:007497551 0 W/7497551-7497551 FN2452 SNP C -> G AC=2;AN=200;BQB=0.825216;DP=4419;DP4=2113,2031,14,27;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.77961e-12;MQSB=0.0338054;RPB=0.743149;SGB=92.009;VDB=0.656673;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.9:7504043 chr09:007504043 0 W/7504043-7504043 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1109-S.SNP.9:7508706 chr09:007508706 0 W/7508706-7508706 FN1109-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g13000 expressed protein SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN864-S.SNP.9:7508962 chr09:007508962 0 W/7508962-7508962 FN864-S Single Base Substitution T-G INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN2639-S.SNP.9:7513765 chr09:007513765 0 W/7513765-7513765 FN2639-S SNP T -> C AC=2;AN=200;BQB=0.844533;DP=5010;DP4=2302,2418,31,29;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=4.28834e-17;MQSB=3.68729e-05;RPB=0.978146;SGB=206.107;VDB=0.194208;EFF=SPLICE_SITE_REGION(LOW||||667|LOC_Os09g13030|protein_coding|CODING|LOC_Os09g13030.1|4|1),INTRON(MODIFIER||||667|LOC_Os09g13030|protein_coding|CODING|LOC_Os09g13030.1|4|1) FN2500.SNP.9:7522395 chr09:007522395 0 W/7522395-7522395 FN2500 SNP C -> T AC=2;AN=200;BQB=0.143703;DP=4365;DP4=2272,1859,29,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21195e-20;MQSB=0.743622;RPB=0.998512;SGB=201.63;VDB=0.632841;EFF=UTR_3_PRIME(MODIFIER||71||522|LOC_Os09g13040|protein_coding|CODING|LOC_Os09g13040.1|1|1) FN1435-S.SNP.9:7638833 chr09:007638833 0 W/7638833-7638833 FN1435-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1446-S.SNP.9:7745935 chr09:007745935 0 W/7745935-7745935 FN1446-S Single Base Substitution G-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2621-S.SNP.9:7748588 chr09:007748588 0 W/7748588-7748588 FN2621-S SNP G -> T AC=1;AN=200;BQB=0.981325;DP=4710;DP4=2198,2187,14,17;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.61021e-11;MQSB=0.451458;RPB=0.799242;SGB=101.557;VDB=0.912312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3482-S.SNP.9:7755698 chr09:007755698 0 W/7755698-7755698 FN3482-S SNP C -> T AC=1;AN=184;BQB=0.911009;DP=2846;DP4=1362,1367,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.90263e-11;MQSB=0.99999;RPB=0.363748;SGB=56.8786;VDB=0.023874;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.9:7757448 chr09:007757448 0 W/7757448-7757448 FN3987-S SNP A -> G AC=1;AN=168;BQB=0.923807;DP=2805;DP4=1300,1391,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46791e-08;MQSB=0.904435;RPB=0.860135;SGB=34.748;VDB=0.125773;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.9:7759038 chr09:007759038 0 W/7759038-7759038 FN495-S Single Base Substitution G-A INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3471-S.SNP.9:7759525 chr09:007759525 0 W/7759525-7759525 FN3471-S SNP A -> G AC=2;AN=184;BQB=0.999409;DP=3007;DP4=1259,1604,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.29828e-19;MQSB=0.953648;RPB=0.126091;SGB=161.787;VDB=0.190713;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.9:7759886 chr09:007759886 0 W/7759886-7759886 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.896477;DP=2228;DP4=1082,1075,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.18064e-09;MQSB=0.990459;RPB=0.882628;SGB=65.6427;VDB=0.958625;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.9:7767262 chr09:007767262 0 W/7767262-7767262 FN982-S Single Base Substitution T-G INTERGENIC HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2116-S.SNP.9:7777200 chr09:007777200 0 W/7777200-7777200 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.620425;DP=3722;DP4=1957,1735,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.30124e-07;MQSB=0.998335;RPB=0.567617;SGB=8.48315;VDB=0.896751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.9:7783969 chr09:007783969 0 W/7783969-7783969 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2421.SNP.9:7789695 chr09:007789695 0 W/7789695-7789695 FN2421 SNP A -> G AC=1;AN=200;BQB=0.726264;DP=4872;DP4=2278,2290,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70736e-08;MQSB=0.971781;RPB=0.570945;SGB=36.6644;VDB=0.646037;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.9:7793930 chr09:007793930 0 W/7793930-7793930 FN739-S Single Base Substitution T-C INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN411-S.SNP.9:7795898 chr09:007795898 0 W/7795898-7795898 FN411-S Single Base Substitution G-T INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN-213.SNP.9:7802408 chr09:007802408 0 W/7802408-7802408 FN-213 Single Base Substitution C-A INTERGENIC HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2670-S.SNP.9:7804645 chr09:007804645 0 W/7804645-7804645 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.950899;DP=4947;DP4=2320,2368,8,18;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0701435;MQB=0.212524;MQSB=0;RPB=0.371188;SGB=114.132;VDB=0.645109;EFF=INTRON(MODIFIER||||935|LOC_Os09g13480|protein_coding|CODING|LOC_Os09g13480.1|2|1) FN2734-S.SNP.9:7815617 chr09:007815617 0 W/7815617-7815617 FN2734-S SNP C -> T AC=1;AN=200;BQB=0.256797;DP=4849;DP4=2596,1986,12,12;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0833161;MQB=0.0997719;MQSB=0;RPB=0.705801;SGB=47.7211;VDB=0.87872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.9:7820563 chr09:007820563 0 W/7820563-7820563 FN3560-S SNP G -> C AC=1;AN=188;BQB=0.97894;DP=2620;DP4=1417,1111,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000381679;MQB=8.99682e-10;MQSB=0.995665;RPB=0.455444;SGB=62.6088;VDB=0.0699636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E189Q|1085|LOC_Os09g13510|protein_coding|CODING|LOC_Os09g13510.1|2|1) FN-202.SNP.9:7827552 chr09:007827552 0 W/7827552-7827552 FN-202 Single Base Substitution T-C INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3607-S.SNP.9:7831493 chr09:007831493 0 W/7831493-7831493 FN3607-S SNP T -> C AC=2;AN=190;BQB=0.918414;DP=2951;DP4=1510,1279,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.19744e-19;MQSB=0.991842;RPB=0.955838;SGB=135.619;VDB=0.378983;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.9:7837944 chr09:007837944 0 W/7837944-7837944 FN3752-S SNP C -> T AC=1;AN=190;BQB=0.742944;DP=2640;DP4=1264,1309,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.26579e-07;MQSB=0.62718;RPB=0.411819;SGB=32.5467;VDB=0.753381;EFF=INTERGENIC(MODIFIER||||||||||1) FN-69.SNP.9:7841936 chr09:007841936 0 W/7841936-7841936 FN-69 Single Base Substitution A-G INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN1650-S.SNP.9:7843117 chr09:007843117 0 W/7843117-7843117 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN755-S.SNP.9:7843204 chr09:007843204 0 W/7843204-7843204 FN755-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g13530 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN590-S.SNP.9:7845392 chr09:007845392 0 W/7845392-7845392 FN590-S Single Base Substitution G-A INTERGENIC HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN-363.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN-363 Single Base Substitution C-T INTERGENIC HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1222-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN1222-S Single Base Substitution C-T INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1355-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1506-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN1506-S Single Base Substitution C-T INTERGENIC Homo SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1514-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN1514-S Single Base Substitution C-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2125-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN2125-S SNP C -> T AC=2;AN=168;BQB=0.60475;DP=3210;DP4=1444,1684,20,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.34421e-20;MQSB=0.996993;RPB=0.976955;SGB=-278.28;VDB=0.82636;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN3375-S SNP C -> T AC=2;AN=184;BQB=0.99711;DP=2849;DP4=1465,1263,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.30799e-19;MQSB=0.987849;RPB=0.917983;SGB=78.7544;VDB=0.462536;EFF=INTERGENIC(MODIFIER||||||||||1) FN4009-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN4009-S SNP C -> T AC=1;AN=168;BQB=0.954346;DP=2655;DP4=1389,1158,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.26953e-08;MQSB=0.85741;RPB=0.115918;SGB=38.1788;VDB=0.168527;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.129386;DP=2366;DP4=1220,1070,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52754e-05;MQSB=0.999916;RPB=0.0748224;SGB=29.6545;VDB=0.0511403;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.9:7847293 chr09:007847293 0 W/7847293-7847293 FN672-S Single Base Substitution C-T INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1375-S.SNP.9:7851872 chr09:007851872 0 W/7851872-7851872 FN1375-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g13540 retrotransposon protein, putative, unclassified, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3343-S.SNP.9:7854513 chr09:007854513 0 W/7854513-7854513 FN3343-S SNP T -> A AC=2;AN=184;BQB=0.989569;DP=3004;DP4=1305,1562,19,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.06527e-18;MQSB=0.995011;RPB=0.594032;SGB=130.135;VDB=0.44347;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.9:7877999 chr09:007877999 0 W/7877999-7877999 FN1048-S Single Base Substitution G-A INTERGENIC HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1692-S.SNP.9:7889393 chr09:007889393 0 W/7889393-7889393 FN1692-S SNP T -> G AC=2;AN=188;BQB=0.766567;DP=3800;DP4=1786,1977,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.26025e-12;MQSB=0.95179;RPB=0.960353;SGB=22.5144;VDB=0.588837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.9:7897886 chr09:007897886 0 W/7897886-7897886 FN1258-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN-232.SNP.9:7898890 chr09:007898890 0 W/7898890-7898890 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1382-S.SNP.9:7907084 chr09:007907084 0 W/7907084-7907084 FN1382-S Single Base Substitution T-A INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-184.SNP.9:7920262 chr09:007920262 0 W/7920262-7920262 FN-184 Single Base Substitution T-A INTRON HOMO SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN957-S.SNP.9:7920849 chr09:007920849 0 W/7920849-7920849 FN957-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g13610 PFT1, putative, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN462-S.SNP.9:7921878 chr09:007921878 0 W/7921878-7921878 FN462-S Single Base Substitution G-T INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN395-S.SNP.9:7933990 chr09:007933990 0 W/7933990-7933990 FN395-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2468.SNP.9:7935942 chr09:007935942 0 W/7935942-7935942 FN2468 SNP T -> C AC=1;AN=200;BQB=0.0716363;DP=5050;DP4=2396,2293,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97122e-07;MQSB=0.399983;RPB=0.448631;SGB=4.67442;VDB=0.239789;EFF=INTRON(MODIFIER||||604|LOC_Os09g13630|protein_coding|CODING|LOC_Os09g13630.1|3|1) FN1537-S.SNP.9:7950153 chr09:007950153 0 W/7950153-7950153 FN1537-S Single Base Substitution T-C INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1624-S.SNP.9:7951684 chr09:007951684 0 W/7951684-7951684 FN1624-S Single Base Substitution G-C INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1261-S.SNP.9:7952103 chr09:007952103 0 W/7952103-7952103 FN1261-S Single Base Substitution C-A INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN4129-S.SNP.9:7956969 chr09:007956969 0 W/7956969-7956969 FN4129-S SNP T -> G AC=1;AN=182;BQB=0.993882;DP=1946;DP4=1074,823,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08693e-05;MQSB=0.93422;RPB=0.999988;SGB=18.0739;VDB=0.0663569;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.9:7959031 chr09:007959031 0 W/7959031-7959031 W23-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-308.SNP.9:7969148 chr09:007969148 0 W/7969148-7969148 FN-308 Single Base Substitution A-T INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN3366-S.SNP.9:7973381 chr09:007973381 0 W/7973381-7973381 FN3366-S SNP T -> C AC=2;AN=184;BQB=0.990911;DP=2868;DP4=1341,1418,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.47634e-16;MQSB=0.996596;RPB=0.63729;SGB=121.091;VDB=0.100994;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.9:7980169 chr09:007980169 0 W/7980169-7980169 FN2460 SNP G -> A AC=1;AN=200;BQB=0.842984;DP=4570;DP4=2224,2158,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08641e-07;MQSB=0.942846;RPB=0.868707;SGB=13.8539;VDB=0.902127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.9:7984942 chr09:007984942 0 W/7984942-7984942 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.35852;DP=6487;DP4=3282,2765,27,16;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.349314;MQB=0.882964;MQSB=0;RPB=0.901207;SGB=144.819;VDB=0.818316;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A45|903|LOC_Os09g13660|protein_coding|CODING|LOC_Os09g13660.1|1|1) FN1093-S.SNP.9:7994950 chr09:007994950 0 W/7994950-7994950 FN1093-S Single Base Substitution C-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN627-S.SNP.9:7994950 chr09:007994950 0 W/7994950-7994950 FN627-S Single Base Substitution C-T INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3950-S.SNP.9:7995947 chr09:007995947 0 W/7995947-7995947 FN3950-S SNP C -> G AC=1;AN=168;BQB=0.989884;DP=1869;DP4=1067,698,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.08625e-06;MQSB=0.0810695;RPB=0.99045;SGB=52.1728;VDB=0.152434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I70M|385|LOC_Os09g13680|protein_coding|CODING|LOC_Os09g13680.1|1|1) FN1136-S.SNP.9:8001450 chr09:008001450 0 W/8001450-8001450 FN1136-S Single Base Substitution A-G INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN983-S.SNP.9:8002793 chr09:008002793 0 W/8002793-8002793 FN983-S Single Base Substitution G-T INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN983-S.SNP.9:8002794 chr09:008002794 0 W/8002794-8002794 FN983-S Single Base Substitution T-C INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3937-S.SNP.9:8006784 chr09:008006784 0 W/8006784-8006784 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.66507;DP=3147;DP4=1418,1611,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.172863;MQB=0.0818174;MQSB=1.84481e-15;RPB=0.000289027;SGB=51.4366;VDB=0.0347334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L394F|1065|LOC_Os09g13690|protein_coding|CODING|LOC_Os09g13690.1|1|1) FN1292-S.SNP.9:8007280 chr09:008007280 0 W/8007280-8007280 FN1292-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g13690 retrotransposon protein, putative, unclassified, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1292-S.SNP.9:8007283 chr09:008007283 0 W/8007283-8007283 FN1292-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g13690 retrotransposon protein, putative, unclassified, expressed SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1371-S.SNP.9:8008084 chr09:008008084 0 W/8008084-8008084 FN1371-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os09g13690 retrotransposon protein, putative, unclassified, expressed SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN1282-S.SNP.9:8011795 chr09:008011795 0 W/8011795-8011795 FN1282-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g13700 retrotransposon protein, putative, unclassified, expressed SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2620-S.SNP.9:8020454 chr09:008020454 0 W/8020454-8020454 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.816841;DP=8710;DP4=2720,5036,25,500;HOB=5.10152e-05;ICB=0.000102546;MQ=20;MQ0F=0.231573;MQB=0.0717695;MQSB=2.05363e-37;RPB=7.50419e-19;SGB=-6946.31;VDB=5.71463e-13;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y1559|1768|LOC_Os09g13710|protein_coding|CODING|LOC_Os09g13710.1|2|1) FN3561-S.SNP.9:8020977 chr09:008020977 0 W/8020977-8020977 FN3561-S SNP C -> T AC=1;AN=188;BQB=0.969517;DP=3734;DP4=1594,2063,17,16;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.138457;MQB=0.749943;MQSB=1.4013e-45;RPB=0.900864;SGB=144.388;VDB=0.727513;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1385H|1768|LOC_Os09g13710|protein_coding|CODING|LOC_Os09g13710.1|2|1) FN1435-S.SNP.9:8026191 chr09:008026191 0 W/8026191-8026191 FN1435-S Single Base Substitution G-A INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN683-S.SNP.9:8029339 chr09:008029339 0 W/8029339-8029339 FN683-S Single Base Substitution C-T INTRON HET SNo: 616, Mutant_ID: FN683-S, Generation: M2, Mutations: 14, Genes: 45, Seed availability: Yes. FN411-S.SNP.9:8030448 chr09:008030448 0 W/8030448-8030448 FN411-S Single Base Substitution G-A INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2599-S.SNP.9:8041759 chr09:008041759 0 W/8041759-8041759 FN2599-S SNP A -> G AC=1;AN=198;BQB=0.98799;DP=3810;DP4=1785,1846,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.29573e-09;MQSB=0.985903;RPB=0.998967;SGB=29.3443;VDB=0.160079;EFF=INTRON(MODIFIER||||394|LOC_Os09g13740|protein_coding|CODING|LOC_Os09g13740.1|8|1),INTRON(MODIFIER||||387|LOC_Os09g13740|protein_coding|CODING|LOC_Os09g13740.2|8|1) FN2080-S.SNP.9:8046751 chr09:008046751 0 W/8046751-8046751 FN2080-S SNP G -> A AC=1;AN=168;BQB=0.466302;DP=2309;DP4=1081,1168,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.88281e-06;MQSB=0.870345;RPB=0.836201;SGB=-0.101747;VDB=0.238753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P58L|394|LOC_Os09g13740|protein_coding|CODING|LOC_Os09g13740.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P58L|387|LOC_Os09g13740|protein_coding|CODING|LOC_Os09g13740.2|1|1) FN2670-S.SNP.9:8047827 chr09:008047827 0 W/8047827-8047827 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.786098;DP=4527;DP4=2338,1907,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61688e-17;MQSB=0.933001;RPB=0.569945;SGB=108.768;VDB=0.0407792;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.9:8065574 chr09:008065574 0 W/8065574-8065574 FN3869-S SNP C -> A AC=2;AN=158;BQB=0.923745;DP=2660;DP4=1321,1228,15,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.77959e-18;MQSB=0.986403;RPB=0.88846;SGB=94.7235;VDB=0.644953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.9:8066354 chr09:008066354 0 W/8066354-8066354 FN3400-S SNP C -> T AC=2;AN=184;BQB=0.766355;DP=3032;DP4=1331,1581,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.10784e-13;MQSB=0.703357;RPB=0.535115;SGB=-40.5343;VDB=0.903544;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.9:8066354 chr09:008066354 0 W/8066354-8066354 FN4077-S SNP C -> T AC=2;AN=182;BQB=0.882698;DP=3029;DP4=1273,1629,7,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.40233e-12;MQSB=0.648692;RPB=0.667079;SGB=63.7146;VDB=0.157542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.9:8076392 chr09:008076392 0 W/8076392-8076392 FN1213-S Single Base Substitution T-G INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN-255.SNP.9:8081674 chr09:008081674 0 W/8081674-8081674 FN-255 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g13790 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1284-S.SNP.9:8084609 chr09:008084609 0 W/8084609-8084609 FN1284-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g13790 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN1536-S.SNP.9:8086073 chr09:008086073 0 W/8086073-8086073 FN1536-S Single Base Substitution C-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2439.SNP.9:8089367 chr09:008089367 0 W/8089367-8089367 FN2439 SNP C -> A AC=1;AN=200;BQB=0.212867;DP=4228;DP4=1927,2044,9,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000946074;MQB=1.68565e-05;MQSB=0.268337;RPB=0.469885;SGB=-52.7312;VDB=0.305174;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-3-1.SNP.9:8090920 chr09:008090920 0 W/8090920-8090920 FN_789-3-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN-84.SNP.9:8091698 chr09:008091698 0 W/8091698-8091698 FN-84 Single Base Substitution G-A INTERGENIC HET SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN541-S.SNP.9:8093196 chr09:008093196 0 W/8093196-8093196 FN541-S Single Base Substitution C-T INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1094-S.SNP.9:8095105 chr09:008095105 0 W/8095105-8095105 FN1094-S Single Base Substitution A-C INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2583-S.SNP.9:8097618 chr09:008097618 0 W/8097618-8097618 FN2583-S SNP T -> C AC=1;AN=200;BQB=0.53195;DP=4917;DP4=2552,2174,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.36089e-09;MQSB=0.999995;RPB=0.999967;SGB=36.6644;VDB=0.733803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.9:8099038 chr09:008099038 0 W/8099038-8099038 FN2129-S SNP C -> A AC=1;AN=168;BQB=0.293108;DP=4452;DP4=2309,2042,33,24;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44567e-20;MQSB=0.999409;RPB=0.898978;SGB=-612.819;VDB=0.00486754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.9:8107003 chr09:008107003 0 W/8107003-8107003 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN3843-S.SNP.9:8115897 chr09:008115897 0 W/8115897-8115897 FN3843-S SNP A -> G AC=1;AN=190;BQB=0.8406;DP=2778;DP4=1474,1188,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.90794e-07;MQSB=0.989518;RPB=0.976286;SGB=25.439;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.9:8119236 chr09:008119236 0 W/8119236-8119236 FN3834-S SNP G -> A AC=2;AN=190;BQB=0.953723;DP=2725;DP4=1275,1352,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35108e-13;MQSB=0.701571;RPB=0.99598;SGB=108.296;VDB=0.312028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D145N|1078|LOC_Os09g13820|protein_coding|CODING|LOC_Os09g13820.1|1|1) FN2784-S.SNP.9:8139339 chr09:008139339 0 W/8139339-8139339 FN2784-S SNP T -> C AC=1;AN=198;BQB=0.921753;DP=4101;DP4=1807,2067,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00707145;MQB=0.00114736;MQSB=6.13523e-13;RPB=0.911249;SGB=94.0758;VDB=0.608234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.9:8139946 chr09:008139946 0 W/8139946-8139946 FN3981-S SNP C -> G AC=1;AN=168;BQB=0.922853;DP=2794;DP4=1085,1619,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0110952;MQB=0.148527;MQSB=0.222521;RPB=0.887481;SGB=41.6096;VDB=0.0558378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G118A|244|LOC_Os09g13860|protein_coding|CODING|LOC_Os09g13860.1|2|1) FN3568-S.SNP.9:8142730 chr09:008142730 0 W/8142730-8142730 FN3568-S SNP C -> A AC=2;AN=188;BQB=0.908866;DP=4001;DP4=2157,1706,23,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.71498e-23;MQSB=0.861706;RPB=0.922834;SGB=203.451;VDB=0.453461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.9:8146149 chr09:008146149 0 W/8146149-8146149 FN2499 SNP T -> A AC=1;AN=200;BQB=0.947303;DP=4747;DP4=2321,2040,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000631978;MQB=6.15576e-09;MQSB=0.933355;RPB=0.968581;SGB=12.7003;VDB=0.628047;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.9:8146194 chr09:008146194 0 W/8146194-8146194 FN2331 SNP T -> G AC=1;AN=192;BQB=0.981854;DP=4854;DP4=2471,2091,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00226617;MQB=7.13724e-09;MQSB=0.477067;RPB=0.106663;SGB=81.1609;VDB=0.49071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.9:8155783 chr09:008155783 0 W/8155783-8155783 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.999676;DP=2438;DP4=1059,1306,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.88139e-12;MQSB=0.993666;RPB=0.628656;SGB=31.3213;VDB=0.854074;EFF=INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.1|2|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.2|1|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.3|1|1),INTRON(MODIFIER||||236|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.4|1|1) FN3777-S.SNP.9:8155784 chr09:008155784 0 W/8155784-8155784 FN3777-S SNP A -> T AC=1;AN=190;BQB=0.756751;DP=2434;DP4=1054,1304,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.92403e-10;MQSB=0.999236;RPB=0.502795;SGB=43.2083;VDB=0.820472;EFF=INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.1|2|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.2|1|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.3|1|1),INTRON(MODIFIER||||236|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.4|1|1) FN4081-S.SNP.9:8156758 chr09:008156758 0 W/8156758-8156758 FN4081-S SNP A -> G AC=2;AN=182;BQB=0.750884;DP=2478;DP4=1076,1270,6,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.97721e-06;MQSB=0.41898;RPB=0.625203;SGB=66.6657;VDB=0.357684;EFF=INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.1|2|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.2|1|1),INTRON(MODIFIER||||307|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.3|1|1),INTRON(MODIFIER||||236|LOC_Os09g13870|protein_coding|CODING|LOC_Os09g13870.4|1|1) FN1038-S.SNP.9:8161932 chr09:008161932 0 W/8161932-8161932 FN1038-S Single Base Substitution T-A INTERGENIC HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN3854-S.SNP.9:8168045 chr09:008168045 0 W/8168045-8168045 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.536002;DP=2361;DP4=1268,986,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000348154;MQSB=0.998061;RPB=0.842683;SGB=27.3346;VDB=0.158821;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S224|729|LOC_Os09g13880|protein_coding|CODING|LOC_Os09g13880.1|2|1) FN3632-S.SNP.9:8172648 chr09:008172648 0 W/8172648-8172648 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.871708;DP=2851;DP4=1451,1252,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.65967e-11;MQSB=0.999932;RPB=0.700054;SGB=71.8647;VDB=0.24284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.9:8179897 chr09:008179897 0 W/8179897-8179897 FN2723-S SNP C -> G AC=1;AN=200;BQB=0.976552;DP=4957;DP4=2502,2174,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91829e-09;MQSB=0.897956;RPB=0.898253;SGB=40.2696;VDB=0.247361;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.9:8179920 chr09:008179920 0 W/8179920-8179920 FN3520-S SNP C -> G AC=1;AN=188;BQB=0.561831;DP=2621;DP4=1324,1241,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.84031e-05;MQSB=0.991468;RPB=0.407812;SGB=21.8112;VDB=0.742057;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.9:8184236 chr09:008184236 0 W/8184236-8184236 FN621-S Single Base Substitution G-A STOP_GAINED HET LOC_Os09g13900 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN451-S.SNP.9:8186761 chr09:008186761 0 W/8186761-8186761 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN4156-S.SNP.9:8205068 chr09:008205068 0 W/8205068-8205068 FN4156-S SNP C -> T AC=1;AN=170;BQB=0.996739;DP=1955;DP4=946,946,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.96098e-07;MQSB=0.959112;RPB=0.999997;SGB=24.5502;VDB=0.963746;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.9:8206784 chr09:008206784 0 W/8206784-8206784 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.930045;DP=4951;DP4=2050,2531,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75666e-09;MQSB=0.958092;RPB=0.675106;SGB=43.2083;VDB=0.789563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.9:8211013 chr09:008211013 0 W/8211013-8211013 FN-174 Single Base Substitution A-G INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN748-S.SNP.9:8211272 chr09:008211272 0 W/8211272-8211272 FN748-S Single Base Substitution A-C INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1477-S.SNP.9:8212198 chr09:008212198 0 W/8212198-8212198 FN1477-S Single Base Substitution A-G INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN489-S.SNP.9:8213427 chr09:008213427 0 W/8213427-8213427 FN489-S Single Base Substitution C-A INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1278-S.SNP.9:8218304 chr09:008218304 0 W/8218304-8218304 FN1278-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2353.SNP.9:8218458 chr09:008218458 0 W/8218458-8218458 FN2353 SNP C -> T AC=1;AN=192;BQB=0.996444;DP=5030;DP4=2349,2403,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.10799e-11;MQSB=0.675572;RPB=0.797726;SGB=61.1661;VDB=0.936311;EFF=INTERGENIC(MODIFIER||||||||||1) FN-380.SNP.9:8218534 chr09:008218534 0 W/8218534-8218534 FN-380 Single Base Substitution G-A INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3464-S.SNP.9:8223719 chr09:008223719 0 W/8223719-8223719 FN3464-S SNP C -> T AC=2;AN=184;BQB=0.932852;DP=3617;DP4=1715,1759,5,10;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=6.3297e-06;MQSB=0.753099;RPB=0.384841;SGB=62.3078;VDB=0.41583;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.9:8226667 chr09:008226667 0 W/8226667-8226667 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN887-S.SNP.9:8231003 chr09:008231003 0 W/8231003-8231003 FN887-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2629-S.SNP.9:8233030 chr09:008233030 0 W/8233030-8233030 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.913961;DP=5238;DP4=2281,2589,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.57522e-13;MQSB=0.717095;RPB=0.988175;SGB=72.7161;VDB=0.943659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.9:8233485 chr09:008233485 0 W/8233485-8233485 FN1135-S Single Base Substitution C-T INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN2318.SNP.9:8234491 chr09:008234491 0 W/8234491-8234491 FN2318 SNP G -> T AC=1;AN=192;BQB=0.931469;DP=5054;DP4=2478,2287,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00118718;MQB=3.06808e-16;MQSB=0.879127;RPB=0.856343;SGB=24.5626;VDB=0.402344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.9:8234494 chr09:008234494 0 W/8234494-8234494 FN2318 SNP A -> T AC=1;AN=192;BQB=0.972014;DP=5048;DP4=2408,2322,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00118859;MQB=1.8407e-13;MQSB=0.91976;RPB=0.451333;SGB=54.5574;VDB=0.25163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.9:8236581 chr09:008236581 0 W/8236581-8236581 FN3665-S SNP C -> T AC=1;AN=190;BQB=0.724141;DP=3002;DP4=1448,1430,16,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.85161e-19;MQSB=0.883498;RPB=0.968185;SGB=172.05;VDB=0.0907568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P645S|993|LOC_Os09g13980|protein_coding|CODING|LOC_Os09g13980.1|2|1) FN-332.SNP.9:8238130 chr09:008238130 0 W/8238130-8238130 FN-332 Single Base Substitution C-T INTERGENIC HOMO SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-287.SNP.9:8241336 chr09:008241336 0 W/8241336-8241336 FN-287 Single Base Substitution G-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN3877-S.SNP.9:8253965 chr09:008253965 0 W/8253965-8253965 FN3877-S SNP G -> A AC=1;AN=158;BQB=0.934416;DP=2461;DP4=1175,1181,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00406339;MQB=2.62222e-05;MQSB=0.198942;RPB=0.941278;SGB=60.1755;VDB=0.953895;EFF=INTERGENIC(MODIFIER||||||||||1) FN900-S.SNP.9:8258080 chr09:008258080 0 W/8258080-8258080 FN900-S Single Base Substitution G-A INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN-402.SNP.9:8258196 chr09:008258196 0 W/8258196-8258196 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3820-S.SNP.9:8258517 chr09:008258517 0 W/8258517-8258517 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.919013;DP=2281;DP4=831,1313,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1262e-05;MQSB=0.443837;RPB=0.999855;SGB=44.5415;VDB=0.329216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.9:8260234 chr09:008260234 0 W/8260234-8260234 FN3793-S SNP G -> T AC=1;AN=190;BQB=0.955935;DP=2774;DP4=1163,1525,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92787e-05;MQSB=0.959386;RPB=0.671226;SGB=30.8803;VDB=0.391871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.9:8261775 chr09:008261775 0 W/8261775-8261775 FN1519-S Single Base Substitution C-T INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1459-S.SNP.9:8270346 chr09:008270346 0 W/8270346-8270346 FN1459-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2252-S.SNP.9:8273446 chr09:008273446 0 W/8273446-8273446 FN2252-S SNP A -> G AC=2;AN=190;BQB=0.255186;DP=4275;DP4=2172,1898,14,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000233918;MQB=1.31029e-05;MQSB=0.0611092;RPB=0.391681;SGB=71.6393;VDB=0.282317;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.9:8275376 chr09:008275376 0 W/8275376-8275376 FN831-S Single Base Substitution G-A INTERGENIC HET SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN2687-S.SNP.9:8276632 chr09:008276632 0 W/8276632-8276632 FN2687-S SNP C -> T AC=1;AN=200;BQB=0.655064;DP=5063;DP4=2595,2158,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54949e-07;MQSB=0.957731;RPB=0.895016;SGB=45.0543;VDB=0.958251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.9:8276673 chr09:008276673 0 W/8276673-8276673 FN2581-S SNP A -> T AC=1;AN=198;BQB=0.755859;DP=4406;DP4=2294,1811,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.62777e-09;MQSB=0.988492;RPB=0.999471;SGB=58.7391;VDB=0.12752;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.9:8282426 chr09:008282426 0 W/8282426-8282426 FN733-S Single Base Substitution C-G INTERGENIC HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN894-S.SNP.9:8282440 chr09:008282440 0 W/8282440-8282440 FN894-S Single Base Substitution G-A INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2412.SNP.9:8291974 chr09:008291974 0 W/8291974-8291974 FN2412 SNP A -> T AC=1;AN=200;BQB=0.511859;DP=4626;DP4=2173,2209,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71709e-09;MQSB=0.756621;RPB=0.989912;SGB=47.7211;VDB=0.640633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.9:8295366 chr09:008295366 0 W/8295366-8295366 FN3448-S SNP A -> C AC=1;AN=184;BQB=0.774273;DP=2455;DP4=1246,1123,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4006e-05;MQSB=0.943228;RPB=0.471237;SGB=10.6662;VDB=0.518984;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.9:8298038 chr09:008298038 0 W/8298038-8298038 FN888-S Single Base Substitution C-T INTERGENIC HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2697-S.SNP.9:8300933 chr09:008300933 0 W/8300933-8300933 FN2697-S SNP T -> A AC=1;AN=200;BQB=0.664606;DP=4963;DP4=2251,2439,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.02388e-09;MQSB=0.747371;RPB=0.76629;SGB=24.2746;VDB=0.621001;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.9:8303127 chr09:008303127 0 W/8303127-8303127 FN4249-S SNP G -> T AC=1;AN=170;BQB=0.998696;DP=2428;DP4=1205,1148,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.23652e-06;MQSB=0.997218;RPB=0.999017;SGB=38.987;VDB=0.881279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A50E|392|LOC_Os09g14040|protein_coding|CODING|LOC_Os09g14040.1|2|1) FN1064-S.SNP.9:8306409 chr09:008306409 0 W/8306409-8306409 FN1064-S Single Base Substitution A-G INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN-197.SNP.9:8311587 chr09:008311587 0 W/8311587-8311587 FN-197 Single Base Substitution C-T INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2670-S.SNP.9:8314823 chr09:008314823 0 W/8314823-8314823 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.911507;DP=4595;DP4=2258,2091,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.756e-10;MQSB=0.623778;RPB=0.7407;SGB=47.4799;VDB=0.692454;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R403|895|LOC_Os09g14060|protein_coding|CODING|LOC_Os09g14060.1|1|1) FN2174-S.SNP.9:8322885 chr09:008322885 0 W/8322885-8322885 FN2174-S SNP A -> G AC=1;AN=168;BQB=0.505732;DP=4007;DP4=1675,2308,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00124782;MQB=0.00047133;MQSB=0.250683;RPB=0.806284;SGB=1.32907;VDB=0.370177;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.9:8329815 chr09:008329815 0 W/8329815-8329815 FN3794-S SNP C -> T AC=1;AN=190;BQB=0.966646;DP=2673;DP4=1462,1143,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.8012e-09;MQSB=0.910523;RPB=0.44638;SGB=58.2031;VDB=0.419688;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN-81 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1034-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN1034-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN1229-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN1229-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1290-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN1290-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1513-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN1513-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1636-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN1636-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2244-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN2244-S SNP A -> T AC=1;AN=190;BQB=0.0728511;DP=4537;DP4=2180,1994,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00044082;MQB=1.47738e-06;MQSB=0.995423;RPB=0.551156;SGB=2.55724;VDB=0.143676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K9M|93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1),SPLICE_SITE_REGION(LOW||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1) FN2374.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN2374 SNP A -> T AC=2;AN=192;BQB=0.914599;DP=4651;DP4=2246,2050,19,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.52458e-19;MQSB=0.90794;RPB=0.489042;SGB=38.6418;VDB=0.606258;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K9M|93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1),SPLICE_SITE_REGION(LOW||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1) FN319-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN319-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3386-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN3386-S SNP A -> T AC=2;AN=184;BQB=0.994149;DP=2764;DP4=1242,1323,17,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.37757e-17;MQSB=0.999637;RPB=0.65984;SGB=26.5856;VDB=0.751694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K9M|93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1),SPLICE_SITE_REGION(LOW||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1) FN3492-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN3492-S SNP A -> T AC=2;AN=184;BQB=0.934807;DP=2522;DP4=1129,1245,9,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02271e-13;MQSB=0.983615;RPB=0.456343;SGB=63.9222;VDB=0.67531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K9M|93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1),SPLICE_SITE_REGION(LOW||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1) FN3713-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN3713-S SNP A -> T AC=1;AN=190;BQB=0.248296;DP=2621;DP4=1255,1211,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00102407;MQSB=0.999325;RPB=0.856769;SGB=10.8904;VDB=0.380974;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K9M|93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1),SPLICE_SITE_REGION(LOW||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|1|1) FN743-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN743-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN955-S.SNP.9:8330241 chr09:008330241 0 W/8330241-8330241 FN955-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN4146-S.SNP.9:8330620 chr09:008330620 0 W/8330620-8330620 FN4146-S SNP G -> A AC=1;AN=170;BQB=0.999894;DP=2344;DP4=1250,987,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.04548e-10;MQSB=0.965771;RPB=0.331081;SGB=41.7633;VDB=0.0061973;EFF=INTRON(MODIFIER||||93|LOC_Os09g14070|protein_coding|CODING|LOC_Os09g14070.1|2|1) FN1458-S.SNP.9:8331468 chr09:008331468 0 W/8331468-8331468 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-101.SNP.9:8339132 chr09:008339132 0 W/8339132-8339132 FN-101 Single Base Substitution G-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2734-S.SNP.9:8340088 chr09:008340088 0 W/8340088-8340088 FN2734-S SNP C -> T AC=1;AN=200;BQB=0.852395;DP=4377;DP4=2123,1964,7,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.07745e-05;MQSB=0.844516;RPB=0.0973286;SGB=49.6594;VDB=0.166322;EFF=INTRON(MODIFIER||||231|LOC_Os09g14090|protein_coding|CODING|LOC_Os09g14090.1|1|1) FN2546-S.SNP.9:8350590 chr09:008350590 0 W/8350590-8350590 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.697367;DP=4137;DP4=1884,2054,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.41187e-05;MQSB=0.745693;RPB=0.730084;SGB=11.1786;VDB=0.727693;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D496|991|LOC_Os09g14100|protein_coding|CODING|LOC_Os09g14100.1|2|1) FN2580-S.SNP.9:8352722 chr09:008352722 0 W/8352722-8352722 FN2580-S SNP T -> A AC=2;AN=198;BQB=0.343087;DP=4436;DP4=2198,1993,22,29;HOB=0.019998;ICB=0.495001;MQ=20;MQ0F=0.291704;MQB=0.329242;MQSB=0;RPB=0.502046;SGB=173.168;VDB=0.360395;EFF=INTRON(MODIFIER||||991|LOC_Os09g14100|protein_coding|CODING|LOC_Os09g14100.1|1|1) FN947-S.SNP.9:8355705 chr09:008355705 0 W/8355705-8355705 FN947-S Single Base Substitution C-T INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3851-S.SNP.9:8358933 chr09:008358933 0 W/8358933-8358933 FN3851-S SNP T -> G AC=1;AN=158;BQB=0.929019;DP=3703;DP4=1720,1873,11,10;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0375371;MQB=7.01447e-05;MQSB=8.47629e-07;RPB=0.045339;SGB=61.029;VDB=0.00432643;EFF=INTRON(MODIFIER||||728|LOC_Os09g14110|protein_coding|CODING|LOC_Os09g14110.1|3|1) FN2499.SNP.9:8360275 chr09:008360275 0 W/8360275-8360275 FN2499 SNP C -> G AC=1;AN=200;BQB=0.981806;DP=3920;DP4=1784,1909,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97255e-06;MQSB=0.890443;RPB=0.998665;SGB=40.4492;VDB=0.949958;EFF=INTRON(MODIFIER||||728|LOC_Os09g14110|protein_coding|CODING|LOC_Os09g14110.1|4|1) FN2638-S.SNP.9:8361270 chr09:008361270 0 W/8361270-8361270 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.964652;DP=4546;DP4=2121,2269,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.49849e-08;MQSB=0.820056;RPB=0.999032;SGB=49.6594;VDB=0.619634;EFF=INTRON(MODIFIER||||728|LOC_Os09g14110|protein_coding|CODING|LOC_Os09g14110.1|6|1) FN943-S.SNP.9:8361853 chr09:008361853 0 W/8361853-8361853 FN943-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN-311.SNP.9:8362256 chr09:008362256 0 W/8362256-8362256 FN-311 Single Base Substitution G-A INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2202-S.SNP.9:8362256 chr09:008362256 0 W/8362256-8362256 FN2202-S SNP G -> A AC=2;AN=190;BQB=0.967045;DP=4433;DP4=2554,1602,23,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.16127e-21;MQSB=0.998818;RPB=0.784397;SGB=176.604;VDB=0.72397;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.9:8362256 chr09:008362256 0 W/8362256-8362256 FN2317 SNP G -> A AC=2;AN=192;BQB=0.66526;DP=4422;DP4=2592,1611,21,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.8339e-17;MQSB=0.986639;RPB=0.969285;SGB=72.5078;VDB=0.588094;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.9:8362256 chr09:008362256 0 W/8362256-8362256 FN3493-S SNP G -> A AC=2;AN=184;BQB=0.940234;DP=3234;DP4=1557,1456,20,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000309215;MQB=4.25807e-22;MQSB=0.998252;RPB=0.850598;SGB=91.3634;VDB=0.415659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.9:8362256 chr09:008362256 0 W/8362256-8362256 FN3865-S SNP G -> A AC=2;AN=158;BQB=0.988824;DP=2608;DP4=1339,1108,19,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.8152e-14;MQSB=0.914972;RPB=0.999607;SGB=108.239;VDB=0.910231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.9:8362693 chr09:008362693 0 W/8362693-8362693 FN3778-S SNP A -> C AC=1;AN=190;BQB=0.973662;DP=3043;DP4=1381,1506,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.82881e-17;MQSB=0.911162;RPB=0.985519;SGB=89.4087;VDB=0.813848;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.9:8365839 chr09:008365839 0 W/8365839-8365839 FN_955-1 Single Base Substitution C-T Homo LOC_Os09g14120 retrotransposon protein, putative, unclassified, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2692-S.SNP.9:8367595 chr09:008367595 0 W/8367595-8367595 FN2692-S SNP C -> T AC=1;AN=200;BQB=0.999012;DP=4622;DP4=2288,2069,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26918e-08;MQSB=0.631293;RPB=0.765755;SGB=16.4591;VDB=0.503225;EFF=INTRON(MODIFIER||||1374|LOC_Os09g14120|protein_coding|CODING|LOC_Os09g14120.1|2|1) FN2315.SNP.9:8367636 chr09:008367636 0 W/8367636-8367636 FN2315 SNP A -> C AC=1;AN=192;BQB=0.562643;DP=4688;DP4=2217,2089,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.60459e-14;MQSB=0.274397;RPB=0.66449;SGB=-7.9965;VDB=0.969834;EFF=INTRON(MODIFIER||||1374|LOC_Os09g14120|protein_coding|CODING|LOC_Os09g14120.1|2|1) FN3778-S.SNP.9:8368241 chr09:008368241 0 W/8368241-8368241 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.982743;DP=2834;DP4=1433,1284,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63477e-13;MQSB=0.999613;RPB=0.993885;SGB=85.5263;VDB=0.206159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A396T|1374|LOC_Os09g14120|protein_coding|CODING|LOC_Os09g14120.1|2|1) FN3778-S.SNP.9:8368246 chr09:008368246 0 W/8368246-8368246 FN3778-S SNP T -> A AC=1;AN=190;BQB=0.891815;DP=2855;DP4=1452,1299,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.43591e-13;MQSB=0.990753;RPB=0.993574;SGB=80.9724;VDB=0.109739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q394L|1374|LOC_Os09g14120|protein_coding|CODING|LOC_Os09g14120.1|2|1) FN1256-S.SNP.9:8369920 chr09:008369920 0 W/8369920-8369920 FN1256-S Single Base Substitution A-C INTRON HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1256-S.SNP.9:8369923 chr09:008369923 0 W/8369923-8369923 FN1256-S Single Base Substitution C-A INTRON HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN_827-1.SNP.9:8371003 chr09:008371003 0 W/8371003-8371003 FN_827-1 Single Base Substitution G-A Homo LOC_Os09g14120 retrotransposon protein, putative, unclassified, expressed SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2729-S.SNP.9:8371633 chr09:008371633 0 W/8371633-8371633 FN2729-S SNP G -> A AC=2;AN=200;BQB=0.396537;DP=4211;DP4=2104,1862,13,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.11003e-15;MQSB=8.20948e-07;RPB=0.756022;SGB=123.342;VDB=0.593564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.9:8372286 chr09:008372286 0 W/8372286-8372286 FN3778-S SNP T -> C AC=1;AN=190;BQB=0.999891;DP=2524;DP4=1279,1157,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.3792e-08;MQSB=0.977017;RPB=0.715745;SGB=39.6545;VDB=0.62814;EFF=INTRON(MODIFIER||||79|LOC_Os09g14130|protein_coding|CODING|LOC_Os09g14130.1|1|1) FN-251.SNP.9:8374613 chr09:008374613 0 W/8374613-8374613 FN-251 Single Base Substitution C-T INTERGENIC HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN4172-S.SNP.9:8374613 chr09:008374613 0 W/8374613-8374613 FN4172-S SNP C -> T AC=2;AN=170;BQB=0.999815;DP=2371;DP4=1194,1093,8,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.00295234;MQB=6.68375e-13;MQSB=0.375629;RPB=0.767797;SGB=101.184;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.9:8375445 chr09:008375445 0 W/8375445-8375445 FN-66 Single Base Substitution A-G INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2659-S.SNP.9:8376866 chr09:008376866 0 W/8376866-8376866 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.843374;DP=5243;DP4=2340,2595,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16038e-18;MQSB=0.912451;RPB=0.441383;SGB=94.3471;VDB=0.294421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A51V|283|LOC_Os09g14140|protein_coding|CODING|LOC_Os09g14140.1|1|1) FN3883-S.SNP.9:8377939 chr09:008377939 0 W/8377939-8377939 FN3883-S SNP G -> C AC=1;AN=158;BQB=0.888389;DP=2590;DP4=1172,1332,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.49899e-12;MQSB=0.972207;RPB=0.601806;SGB=77.6532;VDB=0.273215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.9:8378227 chr09:008378227 0 W/8378227-8378227 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.324798;DP=4764;DP4=2329,2202,13,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.82726e-17;MQSB=0.996047;RPB=0.993606;SGB=78.9831;VDB=0.89842;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.9:8378571 chr09:008378571 0 W/8378571-8378571 FN4016-S SNP C -> A AC=1;AN=168;BQB=0.94731;DP=2782;DP4=1334,1324,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42792e-06;MQSB=0.997705;RPB=0.99159;SGB=38.8805;VDB=0.973995;EFF=INTRON(MODIFIER||||314|LOC_Os09g14150|protein_coding|CODING|LOC_Os09g14150.1|2|1) FN3955-S.SNP.9:8381529 chr09:008381529 0 W/8381529-8381529 FN3955-S SNP A -> C AC=1;AN=168;BQB=0.99307;DP=2573;DP4=1350,1144,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74077e-06;MQSB=0.0314976;RPB=0.439481;SGB=52.1728;VDB=0.464008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.9:8383734 chr09:008383734 0 W/8383734-8383734 FN3797-S SNP T -> C AC=1;AN=190;BQB=0.971415;DP=2522;DP4=1210,1225,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.48589e-08;MQSB=0.974991;RPB=0.914143;SGB=49.0954;VDB=0.432328;EFF=INTRON(MODIFIER||||672|LOC_Os09g14160|protein_coding|CODING|LOC_Os09g14160.1|5|1) FN2121-S.SNP.9:8388726 chr09:008388726 0 W/8388726-8388726 FN2121-S SNP C -> G AC=1;AN=168;BQB=0.386643;DP=2780;DP4=1350,1328,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000719424;MQB=6.13845e-08;MQSB=0.25161;RPB=0.671678;SGB=-68.0681;VDB=0.0450436;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S103|769|LOC_Os09g14180|protein_coding|CODING|LOC_Os09g14180.1|1|1) FN3697-S.SNP.9:8388726 chr09:008388726 0 W/8388726-8388726 FN3697-S SNP C -> G AC=1;AN=190;BQB=0.99035;DP=2941;DP4=1440,1381,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00034002;MQB=4.57556e-09;MQSB=0.961942;RPB=0.678799;SGB=46.7622;VDB=0.634679;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S103|769|LOC_Os09g14180|protein_coding|CODING|LOC_Os09g14180.1|1|1) FN770-S.SNP.9:8388726 chr09:008388726 0 W/8388726-8388726 FN770-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2628-S.SNP.9:8390031 chr09:008390031 0 W/8390031-8390031 FN2628-S SNP C -> T AC=1;AN=200;BQB=0.865268;DP=5432;DP4=2810,2334,6,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0154639;MQB=1.75991e-06;MQSB=1.16402e-07;RPB=0.994366;SGB=40.2696;VDB=0.34981;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P488|769|LOC_Os09g14180|protein_coding|CODING|LOC_Os09g14180.1|2|1) FN2251-S.SNP.9:8391407 chr09:008391407 0 W/8391407-8391407 FN2251-S SNP G -> T AC=1;AN=190;BQB=0.278466;DP=5446;DP4=2252,2781,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.19758e-15;MQSB=0.840739;RPB=0.978286;SGB=82.301;VDB=0.864153;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.9:8391408 chr09:008391408 0 W/8391408-8391408 FN2251-S SNP C -> T AC=1;AN=190;BQB=0.997035;DP=5459;DP4=2272,2788,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.98299e-16;MQSB=0.873433;RPB=0.982986;SGB=82.301;VDB=0.727449;EFF=INTERGENIC(MODIFIER||||||||||1) 822-5-5.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 822-5-5 Single Base Substitution G-C INTERGENIC Homo SNo: 1493, Mutant_ID: 822-5-5, Generation: M2, Mutations: 21, Genes: 100, Seed availability: Yes. 822-5-6.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 822-5-6 Single Base Substitution G-C INTERGENIC Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3551-S.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 FN3551-S SNP G -> C AC=1;AN=188;BQB=0.953928;DP=3328;DP4=1946,1265,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.30189e-07;MQSB=0.434061;RPB=0.999907;SGB=44.4357;VDB=0.216862;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 FN4173-S SNP G -> C AC=2;AN=170;BQB=0.999356;DP=2518;DP4=1509,882,20,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.53845e-12;MQSB=0.246946;RPB=0.994462;SGB=79.6325;VDB=0.422221;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 FN937-S Single Base Substitution G-C INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN_822-5-1.SNP.9:8394016 chr09:008394016 0 W/8394016-8394016 FN_822-5-1 Single Base Substitution G-C Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3445-S.SNP.9:8394142 chr09:008394142 0 W/8394142-8394142 FN3445-S SNP C -> T AC=1;AN=184;BQB=0.997535;DP=3215;DP4=1684,1454,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17266e-05;MQSB=0.463241;RPB=0.999881;SGB=28.7043;VDB=0.787178;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T22|162|LOC_Os09g14190|protein_coding|CODING|LOC_Os09g14190.1|1|1) FN_829-2-5.SNP.9:8395984 chr09:008395984 0 W/8395984-8395984 FN_829-2-5 Single Base Substitution G-A Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2707-S.SNP.9:8397356 chr09:008397356 0 W/8397356-8397356 FN2707-S SNP G -> A AC=1;AN=200;BQB=0.971385;DP=4968;DP4=2407,2299,12,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000402576;MQB=2.13561e-06;MQSB=0.94545;RPB=0.495474;SGB=43.8747;VDB=0.687803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V598M|623|LOC_Os09g14200|protein_coding|CODING|LOC_Os09g14200.1|3|1) FN1175-S.SNP.9:8398667 chr09:008398667 0 W/8398667-8398667 FN1175-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g14210 retrotransposon protein, putative, unclassified, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4071-S.SNP.9:8410708 chr09:008410708 0 W/8410708-8410708 FN4071-S SNP G -> A AC=2;AN=182;BQB=0.999866;DP=2954;DP4=1493,1379,13,13;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0;MQB=0.000240834;MQSB=7.66329e-05;RPB=0.666703;SGB=50.7635;VDB=0.957625;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.9:8411306 chr09:008411306 0 W/8411306-8411306 FN480-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g14220 retrotransposon protein, putative, unclassified, expressed SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1667-S.SNP.9:8417618 chr09:008417618 0 W/8417618-8417618 FN1667-S SNP T -> C AC=2;AN=188;BQB=0.785342;DP=1760;DP4=917,789,17,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.6532e-12;MQSB=0.998754;RPB=0.0677631;SGB=24.937;VDB=0.00673332;EFF=INTERGENIC(MODIFIER||||||||||1) FN-97.SNP.9:8422283 chr09:008422283 0 W/8422283-8422283 FN-97 Single Base Substitution T-C INTERGENIC HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1633-S.SNP.9:8432713 chr09:008432713 0 W/8432713-8432713 FN1633-S Single Base Substitution A-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1633-S.SNP.9:8432714 chr09:008432714 0 W/8432714-8432714 FN1633-S Single Base Substitution G-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3806-S.SNP.9:8435606 chr09:008435606 0 W/8435606-8435606 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.952611;DP=3150;DP4=1268,1763,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.120952;MQB=0.0201909;MQSB=1.78737e-24;RPB=0.44469;SGB=32.5467;VDB=0.718157;EFF=INTRON(MODIFIER||||1298|LOC_Os09g14260|protein_coding|CODING|LOC_Os09g14260.1|1|1) FN3491-S.SNP.9:8437185 chr09:008437185 0 W/8437185-8437185 FN3491-S SNP G -> A AC=2;AN=188;BQB=0.982057;DP=2312;DP4=714,1503,9,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000432526;MQB=3.27412e-15;MQSB=0.560372;RPB=0.0534405;SGB=78.5038;VDB=0.524574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.9:8439457 chr09:008439457 0 W/8439457-8439457 FN1007-S Single Base Substitution G-C INTRON HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN3752-S.SNP.9:8440446 chr09:008440446 0 W/8440446-8440446 FN3752-S SNP T -> G AC=2;AN=190;BQB=0.559854;DP=3157;DP4=1345,1696,10,19;HOB=0.020831;ICB=0.494793;MQ=24;MQ0F=0.229648;MQB=0.763383;MQSB=3.10842e-08;RPB=0.541811;SGB=59.414;VDB=0.566459;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.9:8442628 chr09:008442628 0 W/8442628-8442628 FN818-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g14280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN3520-S.SNP.9:8443508 chr09:008443508 0 W/8443508-8443508 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.238501;DP=3102;DP4=1499,1541,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0274017;MQB=0.232604;MQSB=2.54235e-05;RPB=0.778692;SGB=57.244;VDB=0.623242;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q549*|947|LOC_Os09g14280|protein_coding|CODING|LOC_Os09g14280.1|1|1);LOF=(LOC_Os09g14280|LOC_Os09g14280|1|1.00);NMD=(LOC_Os09g14280|LOC_Os09g14280|1|1.00) FN3890-S.SNP.9:8447897 chr09:008447897 0 W/8447897-8447897 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.79244;DP=1523;DP4=705,680,14,18;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000656599;MQB=1.25516e-09;MQSB=0.000859504;RPB=0.486287;SGB=88.9655;VDB=0.662388;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.9:8453833 chr09:008453833 0 W/8453833-8453833 FN4002-S SNP C -> T AC=1;AN=168;BQB=0.999862;DP=3580;DP4=2330,1113,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.162011;MQB=0.247206;MQSB=3.93389e-27;RPB=0.731587;SGB=79.3486;VDB=0.502644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.9:8460115 chr09:008460115 0 W/8460115-8460115 FN3343-S SNP A -> G AC=1;AN=184;BQB=0.869495;DP=3106;DP4=1258,1743,13,15;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0505473;MQB=0.305966;MQSB=0.882903;RPB=0.694588;SGB=121.091;VDB=0.283376;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y77|433|LOC_Os09g14320|protein_coding|CODING|LOC_Os09g14320.1|2|1) FN2115-S.SNP.9:8466946 chr09:008466946 0 W/8466946-8466946 FN2115-S SNP G -> C AC=1;AN=168;BQB=0.428205;DP=2692;DP4=1575,1083,14,4;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.31055;MQB=0.371666;MQSB=0;RPB=0.621749;SGB=7.05233;VDB=0.614058;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.9:8472005 chr09:008472005 0 W/8472005-8472005 FN3459-S SNP A -> G AC=1;AN=184;BQB=0.996925;DP=3239;DP4=1607,1536,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0679222;MQB=0.907917;MQSB=0.0872678;RPB=0.817198;SGB=42.7914;VDB=0.405613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F939S|1177|LOC_Os09g14340|protein_coding|CODING|LOC_Os09g14340.1|4|1) FN3716-S.SNP.9:8476789 chr09:008476789 0 W/8476789-8476789 FN3716-S SNP G -> A AC=2;AN=190;BQB=0.984344;DP=1841;DP4=955,668,14,7;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00162955;MQB=0.0686589;MQSB=0.00118642;RPB=0.919512;SGB=64.5316;VDB=0.817028;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.9:8482195 chr09:008482195 0 W/8482195-8482195 FN4037-S SNP C -> A AC=1;AN=168;BQB=0.983365;DP=3624;DP4=1714,1810,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0435982;MQB=0.0219523;MQSB=6.52487e-07;RPB=0.870499;SGB=78.7577;VDB=0.294989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q518H|761|LOC_Os09g14360|protein_coding|CODING|LOC_Os09g14360.1|3|1) FN3488-S.SNP.9:8482309 chr09:008482309 0 W/8482309-8482309 FN3488-S SNP G -> A AC=1;AN=184;BQB=0.866968;DP=4231;DP4=2053,2100,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0285984;MQB=0.0579739;MQSB=7.18693e-07;RPB=0.396691;SGB=75.8731;VDB=0.19715;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y480|761|LOC_Os09g14360|protein_coding|CODING|LOC_Os09g14360.1|3|1) FN3821-S.SNP.9:8482445 chr09:008482445 0 W/8482445-8482445 FN3821-S SNP G -> T AC=1;AN=190;BQB=0.998613;DP=4378;DP4=2031,2185,17,17;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.168342;MQB=0.290441;MQSB=0;RPB=0.995994;SGB=149.281;VDB=0.587308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S435Y|761|LOC_Os09g14360|protein_coding|CODING|LOC_Os09g14360.1|3|1) FN1577-S.SNP.9:8482786 chr09:008482786 0 W/8482786-8482786 FN1577-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN835-S.SNP.9:8494703 chr09:008494703 0 W/8494703-8494703 FN835-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g14380 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2731-S.SNP.9:8495790 chr09:008495790 0 W/8495790-8495790 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.471633;DP=4591;DP4=2177,2180,9,15;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0633849;MQB=0.968932;MQSB=0;RPB=0.899706;SGB=19.1209;VDB=0.377225;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L17|144|LOC_Os09g14380|protein_coding|CODING|LOC_Os09g14380.1|1|1) FN3728-S.SNP.9:8496348 chr09:008496348 0 W/8496348-8496348 FN3728-S SNP A -> G AC=2;AN=190;BQB=0.743302;DP=2675;DP4=1080,1457,13,12;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.149907;MQB=0.999956;MQSB=0.0017393;RPB=0.999562;SGB=49.1985;VDB=0.0641506;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-202-3.SNP.9:8497269 chr09:008497269 0 W/8497269-8497269 FN_N1-202-3 Single Base Substitution C-A HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN542-S.SNP.9:8498268 chr09:008498268 0 W/8498268-8498268 FN542-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g14390 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. W598-2-1.SNP.9:8507752 chr09:008507752 0 W/8507752-8507752 W598-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN-25.SNP.9:8509115 chr09:008509115 0 W/8509115-8509115 FN-25 Single Base Substitution T-A INTERGENIC Homo SNo: 25, Mutant_ID: FN-25, Generation: M2, Mutations: 37, Genes: 7, Seed availability: Yes. FN784-S.SNP.9:8510103 chr09:008510103 0 W/8510103-8510103 FN784-S Single Base Substitution G-T INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN1634-S.SNP.9:8510921 chr09:008510921 0 W/8510921-8510921 FN1634-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN2625-S.SNP.9:8517441 chr09:008517441 0 W/8517441-8517441 FN2625-S SNP T -> C AC=2;AN=200;BQB=0.143139;DP=4864;DP4=2533,2126,21,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.71034e-24;MQSB=0.982166;RPB=0.29989;SGB=2.62419;VDB=0.513501;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.9:8522638 chr09:008522638 0 W/8522638-8522638 FN1136-19-S Single Base Substitution G-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2691-S.SNP.9:8539592 chr09:008539592 0 W/8539592-8539592 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.447629;DP=4823;DP4=2319,2219,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39947e-16;MQSB=0.985755;RPB=0.330806;SGB=132.552;VDB=0.264085;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T372I|1058|LOC_Os09g14450|protein_coding|CODING|LOC_Os09g14450.1|3|1) FN464-S.SNP.9:8540291 chr09:008540291 0 W/8540291-8540291 FN464-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g14450 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN-177.SNP.9:8540362 chr09:008540362 0 W/8540362-8540362 FN-177 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g14450 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN585-S.SNP.9:8540384 chr09:008540384 0 W/8540384-8540384 FN585-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g14450 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN585-S.SNP.9:8540427 chr09:008540427 0 W/8540427-8540427 FN585-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g14450 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN-307.SNP.9:8541611 chr09:008541611 0 W/8541611-8541611 FN-307 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g14450 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3889-S.SNP.9:8550350 chr09:008550350 0 W/8550350-8550350 FN3889-S SNP A -> G AC=1;AN=158;BQB=0.931867;DP=2328;DP4=1140,1128,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.82497e-06;MQSB=0.889103;RPB=0.259246;SGB=33.9591;VDB=0.468633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F117S|287|LOC_Os09g14460|protein_coding|CODING|LOC_Os09g14460.1|1|1) FN2703-S.SNP.9:8555390 chr09:008555390 0 W/8555390-8555390 FN2703-S SNP T -> A AC=1;AN=200;BQB=0.238132;DP=5183;DP4=2678,2258,13,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22718e-20;MQSB=0.999025;RPB=0.795732;SGB=-3.42751;VDB=0.654781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M393L|1179|LOC_Os09g14470|protein_coding|CODING|LOC_Os09g14470.1|2|1) FN2703-S.SNP.9:8555391 chr09:008555391 0 W/8555391-8555391 FN2703-S SNP A -> C AC=1;AN=200;BQB=0.98422;DP=5185;DP4=2637,2270,11,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.50541e-18;MQSB=0.995364;RPB=0.793359;SGB=105.163;VDB=0.194851;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caG|H392Q|1179|LOC_Os09g14470|protein_coding|CODING|LOC_Os09g14470.1|2|1) FN2381.SNP.9:8567438 chr09:008567438 0 W/8567438-8567438 FN2381 SNP G -> C AC=1;AN=192;BQB=0.720807;DP=4222;DP4=1943,2083,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000236855;MQB=2.13525e-07;MQSB=0.713147;RPB=0.793928;SGB=49.2105;VDB=0.746961;EFF=INTRON(MODIFIER||||1480|LOC_Os09g14490|protein_coding|CODING|LOC_Os09g14490.1|7|1) FN2592-S.SNP.9:8570078 chr09:008570078 0 W/8570078-8570078 FN2592-S SNP A -> C AC=1;AN=198;BQB=0.987267;DP=4384;DP4=2093,2100,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.15388e-13;MQSB=0.953479;RPB=0.552394;SGB=72.5051;VDB=0.770535;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R818|1480|LOC_Os09g14490|protein_coding|CODING|LOC_Os09g14490.1|12|1) FN2662-S.SNP.9:8573025 chr09:008573025 0 W/8573025-8573025 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.187814;DP=5156;DP4=2821,1928,8,19;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.581846;MQB=0.0660281;MQSB=0;RPB=0.825075;SGB=87.1368;VDB=0.939382;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G119S|1601|LOC_Os09g14500|protein_coding|CODING|LOC_Os09g14500.1|1|1) FN2188-S.SNP.9:8577587 chr09:008577587 0 W/8577587-8577587 FN2188-S SNP A -> T AC=1;AN=190;BQB=0.483906;DP=7708;DP4=3185,3776,28,16;HOB=5.54017e-05;ICB=0.000111386;MQ=10;MQ0F=0.668786;MQB=7.89708e-05;MQSB=0;RPB=0.0183006;SGB=49.1735;VDB=0.479195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.9:8584317 chr09:008584317 0 W/8584317-8584317 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.81135;DP=4819;DP4=2171,2237,22,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.6037e-16;MQSB=0.989965;RPB=0.651549;SGB=25.8654;VDB=0.0214396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1712-S.SNP.9:8585599 chr09:008585599 0 W/8585599-8585599 FN1712-S SNP C -> A AC=1;AN=188;BQB=5.83795e-05;DP=3290;DP4=1495,1740,20,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7297e-06;MQSB=0.965124;RPB=0.0218255;SGB=-268.529;VDB=0.437985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.9:8587553 chr09:008587553 0 W/8587553-8587553 FN2658-S SNP T -> C AC=1;AN=200;BQB=0.951665;DP=4716;DP4=2200,2317,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.04316e-12;MQSB=0.98761;RPB=0.976476;SGB=39.9056;VDB=0.928246;EFF=INTRON(MODIFIER||||380|LOC_Os09g14510|protein_coding|CODING|LOC_Os09g14510.1|4|1),INTRON(MODIFIER||||300|LOC_Os09g14510|protein_coding|CODING|LOC_Os09g14510.2|3|1),INTRON(MODIFIER||||265|LOC_Os09g14510|protein_coding|CODING|LOC_Os09g14510.3|3|1) FN1615-S.SNP.9:8587768 chr09:008587768 0 W/8587768-8587768 FN1615-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3547-S.SNP.9:8590471 chr09:008590471 0 W/8590471-8590471 FN3547-S SNP A -> C AC=1;AN=188;BQB=0.968383;DP=2646;DP4=1350,1218,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.3132e-10;MQSB=0.949841;RPB=0.907357;SGB=50.1574;VDB=0.287478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.9:8591773 chr09:008591773 0 W/8591773-8591773 FN-332 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g14520 integral membrane protein, putative, expressed SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-174.SNP.9:8592058 chr09:008592058 0 W/8592058-8592058 FN-174 Single Base Substitution G-T INTRON HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN411-S.SNP.9:8593234 chr09:008593234 0 W/8593234-8593234 FN411-S Single Base Substitution G-A INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1109-S.SNP.9:8599881 chr09:008599881 0 W/8599881-8599881 FN1109-S Single Base Substitution A-G INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2609-S.SNP.9:8602209 chr09:008602209 0 W/8602209-8602209 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.961255;DP=4633;DP4=2237,2137,19,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.82831e-21;MQSB=0.996981;RPB=0.543002;SGB=178.212;VDB=0.791028;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.9:8604140 chr09:008604140 0 W/8604140-8604140 FN1344-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g14540 protein phosphatase 2C, putative, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1344-S.SNP.9:8604141 chr09:008604141 0 W/8604141-8604141 FN1344-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g14540 protein phosphatase 2C, putative, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-300.SNP.9:8614638 chr09:008614638 0 W/8614638-8614638 FN-300 Single Base Substitution G-T INTRON HOMO SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN751-S.SNP.9:8615368 chr09:008615368 0 W/8615368-8615368 FN751-S Single Base Substitution T-G INTRON HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN931-S.SNP.9:8624376 chr09:008624376 0 W/8624376-8624376 FN931-S Single Base Substitution G-A INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN468-S.SNP.9:8626396 chr09:008626396 0 W/8626396-8626396 FN468-S Single Base Substitution G-A INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN916-S.SNP.9:8629064 chr09:008629064 0 W/8629064-8629064 FN916-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3287-S.SNP.9:8634933 chr09:008634933 0 W/8634933-8634933 FN3287-S SNP T -> C AC=1;AN=184;BQB=0.848218;DP=2844;DP4=1434,1310,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35373e-10;MQSB=0.278774;RPB=0.477647;SGB=75.8731;VDB=0.357527;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.9:8638027 chr09:008638027 0 W/8638027-8638027 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.523865;DP=2963;DP4=1432,1353,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.78946e-06;MQSB=0.659494;RPB=0.972143;SGB=7.0815;VDB=0.662876;EFF=INTRON(MODIFIER||||280|LOC_Os09g14590|protein_coding|CODING|LOC_Os09g14590.1|2|1) FN2282.SNP.9:8656631 chr09:008656631 0 W/8656631-8656631 FN2282 SNP C -> T AC=2;AN=192;BQB=0.175939;DP=4816;DP4=2097,2373,39,33;HOB=0.0206163;ICB=0.494846;MQ=17;MQ0F=0.348422;MQB=0.176237;MQSB=0.253794;RPB=0.163661;SGB=195.855;VDB=0.6288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.9:8661687 chr09:008661687 0 W/8661687-8661687 FN2190-S SNP T -> C AC=1;AN=190;BQB=0.990451;DP=4572;DP4=2304,1995,12,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000218723;MQB=2.15007e-14;MQSB=0.0433429;RPB=0.118442;SGB=131.065;VDB=0.1238;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.9:8666294 chr09:008666294 0 W/8666294-8666294 FN776-S Single Base Substitution A-G INTRON HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN2201-S.SNP.9:8668718 chr09:008668718 0 W/8668718-8668718 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.606269;DP=4368;DP4=2321,1816,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000228938;MQB=2.45632e-10;MQSB=0.860154;RPB=0.946288;SGB=68.0854;VDB=0.543779;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.9:8672209 chr09:008672209 0 W/8672209-8672209 FN1548-S SNP C -> T AC=2;AN=186;BQB=0.125583;DP=1379;DP4=836,513,12,5;HOB=0.0212741;ICB=0.494682;MQ=46;MQ0F=0;MQB=7.96795e-10;MQSB=0.827904;RPB=0.997494;SGB=28.6195;VDB=0.945649;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G227|755|LOC_Os09g14620|protein_coding|CODING|LOC_Os09g14620.1|1|1) FN1548-S.SNP.9:8672210 chr09:008672210 0 W/8672210-8672210 FN1548-S SNP C -> T AC=2;AN=186;BQB=0.393643;DP=1393;DP4=843,518,11,4;HOB=0.0212741;ICB=0.494682;MQ=46;MQ0F=0;MQB=4.80661e-09;MQSB=0.901249;RPB=0.97309;SGB=62.6088;VDB=0.967225;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q228*|755|LOC_Os09g14620|protein_coding|CODING|LOC_Os09g14620.1|1|1);LOF=(LOC_Os09g14620|LOC_Os09g14620|1|1.00);NMD=(LOC_Os09g14620|LOC_Os09g14620|1|1.00) FN981-S.SNP.9:8676080 chr09:008676080 0 W/8676080-8676080 FN981-S Single Base Substitution G-T INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2593-S.SNP.9:8677072 chr09:008677072 0 W/8677072-8677072 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.920936;DP=3430;DP4=1699,1425,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000291545;MQB=2.01463e-05;MQSB=0.484893;RPB=0.0621048;SGB=25.7687;VDB=0.470677;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.9:8677221 chr09:008677221 0 W/8677221-8677221 FN2458 SNP G -> A AC=1;AN=200;BQB=0.500149;DP=3598;DP4=1619,1759,8,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000555864;MQB=2.12377e-06;MQSB=1.06598e-09;RPB=0.373794;SGB=72.6852;VDB=0.439008;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.9:8678533 chr09:008678533 0 W/8678533-8678533 W360-2S-2 Single Base Substitution G-A INTRON HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3630-S.SNP.9:8680354 chr09:008680354 0 W/8680354-8680354 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.981043;DP=3347;DP4=1652,1592,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.51645e-05;MQSB=0.943044;RPB=0.97355;SGB=35.4339;VDB=0.579238;EFF=INTRON(MODIFIER||||761|LOC_Os09g14630|protein_coding|CODING|LOC_Os09g14630.1|4|1) FN2659-S.SNP.9:8682605 chr09:008682605 0 W/8682605-8682605 FN2659-S SNP A -> G AC=1;AN=200;BQB=0.842955;DP=4922;DP4=2390,2354,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23742e-15;MQSB=0.852749;RPB=0.960969;SGB=50.3263;VDB=0.163824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-S.SNP.9:8683735 chr09:008683735 0 W/8683735-8683735 FN1136-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1234-S.SNP.9:8689628 chr09:008689628 0 W/8689628-8689628 FN1234-S Single Base Substitution C-T INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1234-S.SNP.9:8689629 chr09:008689629 0 W/8689629-8689629 FN1234-S Single Base Substitution G-T INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN3477-S.SNP.9:8690830 chr09:008690830 0 W/8690830-8690830 FN3477-S SNP A -> T AC=1;AN=184;BQB=0.79516;DP=2834;DP4=1148,1545,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35709e-11;MQSB=0.998339;RPB=0.232402;SGB=75.8731;VDB=0.538493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H169Q|403|LOC_Os09g14660|protein_coding|CODING|LOC_Os09g14660.1|2|1) FN-178.SNP.9:8691954 chr09:008691954 0 W/8691954-8691954 FN-178 Single Base Substitution C-T INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-202.SNP.9:8696998 chr09:008696998 0 W/8696998-8696998 FN-202 Single Base Substitution T-G INTRON HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2308.SNP.9:8717289 chr09:008717289 0 W/8717289-8717289 FN2308 SNP T -> G AC=1;AN=192;BQB=0.830788;DP=4656;DP4=1959,2255,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.18605e-11;MQSB=0.652491;RPB=0.967831;SGB=-38.813;VDB=0.810856;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.9:8718220 chr09:008718220 0 W/8718220-8718220 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.839213;DP=2769;DP4=1322,1350,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.01796e-08;MQSB=0.945608;RPB=0.988479;SGB=52.1728;VDB=0.036764;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.9:8720468 chr09:008720468 0 W/8720468-8720468 FN3443-S SNP G -> A AC=1;AN=184;BQB=0.812603;DP=1906;DP4=1076,746,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0162644;MQB=0.62218;MQSB=2.56438e-43;RPB=0.295322;SGB=44.2207;VDB=0.0381119;EFF=INTRON(MODIFIER||||1405|LOC_Os09g14690|protein_coding|CODING|LOC_Os09g14690.1|1|1) FN-17.SNP.9:8720776 chr09:008720776 0 W/8720776-8720776 FN-17 Single Base Substitution G-T INTRON Homo SNo: 17, Mutant_ID: FN-17, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN1031-S.SNP.9:8720776 chr09:008720776 0 W/8720776-8720776 FN1031-S Single Base Substitution G-T INTRON HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN626-S.SNP.9:8720776 chr09:008720776 0 W/8720776-8720776 FN626-S Single Base Substitution G-T INTRON HOMO SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN925-S.SNP.9:8724507 chr09:008724507 0 W/8724507-8724507 FN925-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3740-S.SNP.9:8732988 chr09:008732988 0 W/8732988-8732988 FN3740-S SNP C -> G AC=2;AN=190;BQB=0.867838;DP=2999;DP4=1345,1558,14,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.18238e-11;MQSB=0.957919;RPB=0.20394;SGB=64.5316;VDB=0.0818842;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.9:8739108 chr09:008739108 0 W/8739108-8739108 FN1239-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4142-S.SNP.9:8746134 chr09:008746134 0 W/8746134-8746134 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.950671;DP=2473;DP4=1219,1189,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.70001e-08;MQSB=0.997991;RPB=0.858155;SGB=47.8722;VDB=0.96765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P157S|1732|LOC_Os09g14720|protein_coding|CODING|LOC_Os09g14720.1|2|1) FN876-S.SNP.9:8749801 chr09:008749801 0 W/8749801-8749801 FN876-S Single Base Substitution A-G INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2584-S.SNP.9:8750269 chr09:008750269 0 W/8750269-8750269 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.447501;DP=3671;DP4=1699,1749,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.31923e-09;MQSB=0.501073;RPB=0.899039;SGB=72.5051;VDB=0.361678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.9:8755341 chr09:008755341 0 W/8755341-8755341 FN2540-S SNP C -> A AC=1;AN=198;BQB=0.975249;DP=4342;DP4=2117,2003,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20419e-12;MQSB=0.979216;RPB=0.741868;SGB=39.7248;VDB=0.352097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.9:8755342 chr09:008755342 0 W/8755342-8755342 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.965037;DP=4334;DP4=2079,2013,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.72072e-13;MQSB=0.98913;RPB=0.691748;SGB=61.7198;VDB=0.542122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.9:8759909 chr09:008759909 0 W/8759909-8759909 FN2243-S SNP G -> T AC=1;AN=190;BQB=0.610999;DP=4686;DP4=2194,2188,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.17823e-08;MQSB=0.999963;RPB=0.115321;SGB=43.2083;VDB=0.28002;EFF=INTERGENIC(MODIFIER||||||||||1) FN4122-S.SNP.9:8763587 chr09:008763587 0 W/8763587-8763587 FN4122-S SNP G -> T AC=2;AN=182;BQB=0.846719;DP=2932;DP4=1357,1480,16,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.17249e-20;MQSB=0.98879;RPB=0.52145;SGB=138.839;VDB=0.542827;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.9:8764075 chr09:008764075 0 W/8764075-8764075 FN1446-S Single Base Substitution G-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2660-S.SNP.9:8767262 chr09:008767262 0 W/8767262-8767262 FN2660-S SNP C -> A AC=1;AN=200;BQB=0.976263;DP=6341;DP4=3627,2398,7,8;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.250276;MQB=0.0516513;MQSB=0;RPB=0.962811;SGB=4.67442;VDB=0.568269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.9:8777673 chr09:008777673 0 W/8777673-8777673 FN2246-S SNP A -> G AC=2;AN=190;BQB=0.768869;DP=4406;DP4=1717,2300,12,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.12124e-14;MQSB=0.0156977;RPB=0.820516;SGB=30.527;VDB=0.811203;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.9:8777729 chr09:008777729 0 W/8777729-8777729 FN510-S Single Base Substitution G-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN510-S.SNP.9:8777730 chr09:008777730 0 W/8777730-8777730 FN510-S Single Base Substitution G-A INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN4065-S.SNP.9:8783280 chr09:008783280 0 W/8783280-8783280 FN4065-S SNP G -> A AC=1;AN=168;BQB=0.939236;DP=1831;DP4=673,1062,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.65199e-07;MQSB=0.224735;RPB=0.978163;SGB=52.1728;VDB=0.574591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.9:8784010 chr09:008784010 0 W/8784010-8784010 FN-363 Single Base Substitution G-A INTERGENIC HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN1381-S.SNP.9:8785140 chr09:008785140 0 W/8785140-8785140 FN1381-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2583-S.SNP.9:8787954 chr09:008787954 0 W/8787954-8787954 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.223538;DP=4343;DP4=2072,2026,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75032e-10;MQSB=0.735396;RPB=0.920137;SGB=-13.1102;VDB=0.527109;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F272L|790|LOC_Os09g14770|protein_coding|CODING|LOC_Os09g14770.1|3|1) FN2542-S.SNP.9:8791817 chr09:008791817 0 W/8791817-8791817 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.0578083;DP=3806;DP4=1657,1990,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000262743;MQB=3.48851e-05;MQSB=0.998813;RPB=0.842645;SGB=54.144;VDB=0.604715;EFF=INTERGENIC(MODIFIER||||||||||1) FN532-S.SNP.9:8792893 chr09:008792893 0 W/8792893-8792893 FN532-S Single Base Substitution A-T INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2781-S.SNP.9:8796915 chr09:008796915 0 W/8796915-8796915 FN2781-S SNP A -> G AC=1;AN=198;BQB=0.958804;DP=3767;DP4=1632,1851,20,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0164587;MQB=7.27803e-13;MQSB=0.0568213;RPB=0.235431;SGB=-179.049;VDB=4.61808e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.9:8805173 chr09:008805173 0 W/8805173-8805173 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.999227;DP=2947;DP4=1316,1474,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37419e-05;MQSB=0.00128053;RPB=0.997988;SGB=48.979;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.9:8808696 chr09:008808696 0 W/8808696-8808696 FN714-S Single Base Substitution G-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN4051-S.SNP.9:8817897 chr09:008817897 0 W/8817897-8817897 FN4051-S SNP G -> A AC=1;AN=168;BQB=0.73;DP=2790;DP4=1179,1490,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.139427;MQB=0.661892;MQSB=0;RPB=0.376303;SGB=61.0344;VDB=0.0489424;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P1780|2027|LOC_Os09g14800|protein_coding|CODING|LOC_Os09g14800.1|2|1) FN4165-S.SNP.9:8825775 chr09:008825775 0 W/8825775-8825775 FN4165-S SNP C -> A AC=1;AN=170;BQB=0.999913;DP=1665;DP4=900,716,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.03003;MQB=0.332374;MQSB=0.126931;RPB=0.881483;SGB=38.987;VDB=0.729128;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G387W|812|LOC_Os09g14820|protein_coding|CODING|LOC_Os09g14820.1|1|1) FN2107-S.SNP.9:8826104 chr09:008826104 0 W/8826104-8826104 FN2107-S SNP G -> C AC=1;AN=168;BQB=0.302801;DP=1607;DP4=757,816,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0528936;MQB=0.911242;MQSB=6.89076e-06;RPB=0.674203;SGB=47.7421;VDB=0.566082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tGt|S277C|812|LOC_Os09g14820|protein_coding|CODING|LOC_Os09g14820.1|1|1) FN1513-S.SNP.9:8829481 chr09:008829481 0 W/8829481-8829481 FN1513-S Single Base Substitution C-G INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN-314.SNP.9:8830882 chr09:008830882 0 W/8830882-8830882 FN-314 Single Base Substitution G-A INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-316.SNP.9:8832010 chr09:008832010 0 W/8832010-8832010 FN-316 Single Base Substitution C-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1559-S.SNP.9:8832951 chr09:008832951 0 W/8832951-8832951 FN1559-S Single Base Substitution T-G INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN-203.SNP.9:8835885 chr09:008835885 0 W/8835885-8835885 FN-203 Single Base Substitution T-C INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN373-S.SNP.9:8837301 chr09:008837301 0 W/8837301-8837301 FN373-S Single Base Substitution C-T INTERGENIC HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2640-S.SNP.9:8846221 chr09:008846221 0 W/8846221-8846221 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.485931;DP=10496;DP4=5377,4585,29,20;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0033346;MQB=4.32773e-12;MQSB=1.74925e-16;RPB=0.995583;SGB=166.451;VDB=0.473432;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A240|549|LOC_Os09g14840|protein_coding|CODING|LOC_Os09g14840.1|1|1) FN4106-S.SNP.9:8859159 chr09:008859159 0 W/8859159-8859159 FN4106-S SNP C -> T AC=2;AN=182;BQB=0.764673;DP=3090;DP4=1535,1468,23,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.4186e-16;MQSB=0.990384;RPB=0.281689;SGB=63.3178;VDB=0.1056;EFF=INTRON(MODIFIER||||876|LOC_Os09g14850|protein_coding|CODING|LOC_Os09g14850.1|1|1) FN994-S.SNP.9:8863741 chr09:008863741 0 W/8863741-8863741 FN994-S Single Base Substitution G-A INTERGENIC HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN1687-S.SNP.9:8864101 chr09:008864101 0 W/8864101-8864101 FN1687-S SNP T -> C AC=1;AN=188;BQB=0.0165837;DP=2702;DP4=1306,1331,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.32841e-07;MQSB=0.886288;RPB=0.516757;SGB=-262.073;VDB=0.8672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.9:8865979 chr09:008865979 0 W/8865979-8865979 FN1372-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1619-S.SNP.9:8873948 chr09:008873948 0 W/8873948-8873948 FN1619-S Single Base Substitution G-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4049-S.SNP.9:8873948 chr09:008873948 0 W/8873948-8873948 FN4049-S SNP G -> T AC=2;AN=168;BQB=0.86458;DP=2490;DP4=1212,1160,6,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.15874e-08;MQSB=0.999303;RPB=0.74234;SGB=56.6036;VDB=0.539527;EFF=INTERGENIC(MODIFIER||||||||||1) FN885-S.SNP.9:8873948 chr09:008873948 0 W/8873948-8873948 FN885-S Single Base Substitution G-T INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN-74.SNP.9:8885925 chr09:008885925 0 W/8885925-8885925 FN-74 Single Base Substitution T-C INTERGENIC HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2449.SNP.9:8889379 chr09:008889379 0 W/8889379-8889379 FN2449 SNP G -> A AC=1;AN=198;BQB=0.447855;DP=4529;DP4=1952,2268,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.30686e-07;MQSB=0.757652;RPB=0.982088;SGB=7.88476;VDB=0.496398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.9:8889608 chr09:008889608 0 W/8889608-8889608 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.000201049;DP=3684;DP4=1567,1811,16,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.15631e-11;MQSB=0.483823;RPB=0.812735;SGB=146.046;VDB=0.101226;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S151|175|LOC_Os09g14890|protein_coding|CODING|LOC_Os09g14890.1|2|1) FN3601-S.SNP.9:8893529 chr09:008893529 0 W/8893529-8893529 FN3601-S SNP C -> T AC=1;AN=190;BQB=0.0136905;DP=2634;DP4=1209,1349,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000382489;MQSB=0.680659;RPB=0.169778;SGB=28.9928;VDB=0.382943;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.9:8897936 chr09:008897936 0 W/8897936-8897936 FN1627-S Single Base Substitution A-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3937-S.SNP.9:8906642 chr09:008906642 0 W/8906642-8906642 FN3937-S SNP G -> A AC=1;AN=158;BQB=0.66919;DP=2492;DP4=1206,1199,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.98373e-05;MQSB=0.997065;RPB=0.663077;SGB=27.3346;VDB=0.141978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.9:8908129 chr09:008908129 0 W/8908129-8908129 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.992982;DP=4221;DP4=1881,2079,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01853e-08;MQSB=0.890678;RPB=0.461489;SGB=54.6902;VDB=0.867939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.9:8910192 chr09:008910192 0 W/8910192-8910192 FN2210-S SNP A -> T AC=1;AN=190;BQB=0.932792;DP=4939;DP4=2374,2281,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.94618e-11;MQSB=0.895224;RPB=0.179919;SGB=13.4344;VDB=0.253208;EFF=INTERGENIC(MODIFIER||||||||||1) FN2469.SNP.9:8915346 chr09:008915346 0 W/8915346-8915346 FN2469 SNP C -> G AC=1;AN=198;BQB=0.731221;DP=5287;DP4=2626,2292,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.16617e-10;MQSB=0.993873;RPB=0.468955;SGB=45.1159;VDB=0.395337;EFF=INTRON(MODIFIER||||68|LOC_Os09g14920|protein_coding|CODING|LOC_Os09g14920.1|1|1) FN466-S.SNP.9:8922241 chr09:008922241 0 W/8922241-8922241 FN466-S Single Base Substitution T-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1283-S.SNP.9:8925257 chr09:008925257 0 W/8925257-8925257 FN1283-S Single Base Substitution T-C INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4179-S.SNP.9:8935113 chr09:008935113 0 W/8935113-8935113 FN4179-S SNP T -> C AC=1;AN=170;BQB=0.83886;DP=1305;DP4=701,551,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.84763e-06;MQSB=0.938811;RPB=0.606226;SGB=38.987;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.9:8937715 chr09:008937715 0 W/8937715-8937715 FN4255-S SNP G -> A AC=2;AN=170;BQB=0.999116;DP=2306;DP4=1188,1024,14,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.25313e-15;MQSB=0.999997;RPB=0.795269;SGB=86.5178;VDB=0.303638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.9:8944920 chr09:008944920 0 W/8944920-8944920 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.766801;DP=2180;DP4=1070,1014,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.57843e-06;MQSB=0.983119;RPB=0.999911;SGB=51.4366;VDB=0.84004;EFF=INTRON(MODIFIER||||577|LOC_Os09g14930|protein_coding|CODING|LOC_Os09g14930.1|3|1) FN3709-S.SNP.9:8949634 chr09:008949634 0 W/8949634-8949634 FN3709-S SNP T -> A AC=1;AN=190;BQB=0.75096;DP=2748;DP4=1274,1341,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.7189e-07;MQSB=0.119588;RPB=0.659461;SGB=23.6597;VDB=0.333627;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.9:8955426 chr09:008955426 0 W/8955426-8955426 FN700-S Single Base Substitution G-A INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1064-S.SNP.9:8962253 chr09:008962253 0 W/8962253-8962253 FN1064-S Single Base Substitution G-T INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2289.SNP.9:8962893 chr09:008962893 0 W/8962893-8962893 FN2289 SNP G -> A AC=2;AN=192;BQB=0.569458;DP=4400;DP4=2002,2158,20,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.3059e-21;MQSB=0.00476304;RPB=0.979746;SGB=139.582;VDB=0.714258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.9:8966369 chr09:008966369 0 W/8966369-8966369 FN3050-S SNP C -> A AC=1;AN=184;BQB=0.919949;DP=2587;DP4=1265,1210,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97876e-06;MQSB=0.955922;RPB=0.669741;SGB=39.699;VDB=0.910125;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.9:8968184 chr09:008968184 0 W/8968184-8968184 FN4258-S SNP A -> G AC=1;AN=170;BQB=0.620845;DP=2181;DP4=1046,1069,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.38553e-06;MQSB=0.979386;RPB=0.43316;SGB=52.3148;VDB=0.782957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.9:8971087 chr09:008971087 0 W/8971087-8971087 FN2582-S SNP G -> C AC=1;AN=198;BQB=0.916056;DP=4472;DP4=2294,1981,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.83425e-08;MQSB=0.990214;RPB=0.349408;SGB=2.96892;VDB=0.637461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cga/Gga|R125G|527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cga/Gga|R125G|527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.2|2|1) FN2286.SNP.9:8971865 chr09:008971865 0 W/8971865-8971865 FN2286 SNP T -> A AC=2;AN=192;BQB=0.207165;DP=5104;DP4=2546,2274,25,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.38602e-24;MQSB=0.960384;RPB=0.468937;SGB=143.146;VDB=0.712243;EFF=INTRON(MODIFIER||||527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.1|2|1),INTRON(MODIFIER||||527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.2|1|1) FN2780-S.SNP.9:8972098 chr09:008972098 0 W/8972098-8972098 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.677036;DP=4093;DP4=1868,2044,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.08175e-09;MQSB=0.992468;RPB=0.998965;SGB=37.1297;VDB=0.628046;EFF=INTRON(MODIFIER||||527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.1|2|1),INTRON(MODIFIER||||527|LOC_Os09g14960|protein_coding|CODING|LOC_Os09g14960.2|1|1) FN896-S.SNP.9:8974425 chr09:008974425 0 W/8974425-8974425 FN896-S Single Base Substitution C-T INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2364.SNP.9:8976474 chr09:008976474 0 W/8976474-8976474 FN2364 SNP A -> T AC=1;AN=192;BQB=0.995853;DP=5015;DP4=2468,2117,25,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.76766e-21;MQSB=0.893196;RPB=0.904332;SGB=-2.91736;VDB=0.584245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.9:8979374 chr09:008979374 0 W/8979374-8979374 FN2364 SNP G -> A AC=1;AN=192;BQB=0.0105058;DP=5078;DP4=2375,2350,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.21238e-14;MQSB=0.416902;RPB=0.470137;SGB=-112.981;VDB=0.13102;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.9:8985057 chr09:008985057 0 W/8985057-8985057 FN-265 Single Base Substitution T-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3653-S.SNP.9:8985610 chr09:008985610 0 W/8985610-8985610 FN3653-S SNP G -> C AC=2;AN=190;BQB=0.999408;DP=2860;DP4=1328,1379,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.8794e-10;MQSB=0.999247;RPB=0.997895;SGB=53.8699;VDB=0.14227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.9:8987605 chr09:008987605 0 W/8987605-8987605 FN2481 SNP G -> A AC=2;AN=198;BQB=0.244509;DP=4088;DP4=1948,1888,18,17;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=1.18365e-11;MQSB=0.708961;RPB=0.994878;SGB=155.578;VDB=0.932821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.9:8990173 chr09:008990173 0 W/8990173-8990173 FN2387 SNP G -> T AC=1;AN=192;BQB=0.568617;DP=4898;DP4=2316,2208,19,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.5318e-20;MQSB=0.97844;RPB=0.904528;SGB=-0.0956204;VDB=0.655848;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.9:8992571 chr09:008992571 0 W/8992571-8992571 FN1007-S Single Base Substitution T-C INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN1465-S.SNP.9:8994836 chr09:008994836 0 W/8994836-8994836 FN1465-S Single Base Substitution C-A INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN701-S.SNP.9:8996989 chr09:008996989 0 W/8996989-8996989 FN701-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN701-S.SNP.9:8996990 chr09:008996990 0 W/8996990-8996990 FN701-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g14990 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1275-S.SNP.9:9001140 chr09:009001140 0 W/9001140-9001140 FN1275-S Single Base Substitution A-G INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN-111.SNP.9:9002816 chr09:009002816 0 W/9002816-9002816 FN-111 Single Base Substitution C-T INTERGENIC HET SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN3559-S.SNP.9:9006346 chr09:009006346 0 W/9006346-9006346 FN3559-S SNP T -> C AC=1;AN=188;BQB=0.964809;DP=2551;DP4=1194,1310,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.22791e-08;MQSB=0.995178;RPB=0.83742;SGB=48.979;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.9:9008240 chr09:009008240 0 W/9008240-9008240 FN2310 SNP C -> A AC=1;AN=192;BQB=0.996724;DP=4975;DP4=2512,2137,22,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.56288e-16;MQSB=0.800347;RPB=0.154951;SGB=62.2505;VDB=0.848197;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.9:9013014 chr09:009013014 0 W/9013014-9013014 FN3821-S SNP C -> T AC=1;AN=190;BQB=0.951009;DP=2776;DP4=1339,1332,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.19466e-09;MQSB=0.993036;RPB=0.894083;SGB=39.6545;VDB=0.655855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.9:9017523 chr09:009017523 0 W/9017523-9017523 FN3527-S SNP G -> A AC=1;AN=188;BQB=0.992095;DP=2816;DP4=1409,1302,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10953e-07;MQSB=0.0107978;RPB=0.820451;SGB=62.6088;VDB=0.674156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.9:9019823 chr09:009019823 0 W/9019823-9019823 FN3323-S SNP G -> T AC=1;AN=184;BQB=0.968425;DP=3048;DP4=1605,1300,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0269029;MQB=0.129051;MQSB=2.78223e-08;RPB=0.446455;SGB=28.7043;VDB=0.54107;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.9:9029131 chr09:009029131 0 W/9029131-9029131 FN-265 Single Base Substitution T-C INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2094-S.SNP.9:9030642 chr09:009030642 0 W/9030642-9030642 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.235882;DP=3758;DP4=1417,2284,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.213145;MQB=0.0523666;MQSB=0;RPB=0.995357;SGB=18.4989;VDB=0.994694;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.9:9031731 chr09:009031731 0 W/9031731-9031731 FN428-S Single Base Substitution T-C INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN428-S.SNP.9:9031738 chr09:009031738 0 W/9031738-9031738 FN428-S Single Base Substitution C-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN4122-S.SNP.9:9035734 chr09:009035734 0 W/9035734-9035734 FN4122-S SNP G -> T AC=2;AN=182;BQB=0.954607;DP=3172;DP4=1505,1590,17,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.26791e-19;MQSB=0.999945;RPB=0.994566;SGB=73.3613;VDB=0.787949;EFF=INTRON(MODIFIER||||1332|LOC_Os09g15010|protein_coding|CODING|LOC_Os09g15010.1|6|1) FN2484.SNP.9:9035848 chr09:009035848 0 W/9035848-9035848 FN2484 SNP G -> A AC=2;AN=198;BQB=0.999123;DP=4367;DP4=2109,1936,28,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00022899;MQB=7.71614e-27;MQSB=0.805482;RPB=0.210693;SGB=112.85;VDB=0.611047;EFF=INTRON(MODIFIER||||1332|LOC_Os09g15010|protein_coding|CODING|LOC_Os09g15010.1|6|1) FN4128-S.SNP.9:9037369 chr09:009037369 0 W/9037369-9037369 FN4128-S SNP C -> T AC=1;AN=182;BQB=0.94579;DP=3357;DP4=1598,1699,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.00238308;MQB=0.998838;MQSB=0.935726;RPB=0.531122;SGB=30.5793;VDB=0.0367379;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W976*|1332|LOC_Os09g15010|protein_coding|CODING|LOC_Os09g15010.1|4|1);LOF=(LOC_Os09g15010|LOC_Os09g15010|1|1.00);NMD=(LOC_Os09g15010|LOC_Os09g15010|1|1.00) FN-281.SNP.9:9039859 chr09:009039859 0 W/9039859-9039859 FN-281 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g15010 retrotransposon protein, putative, unclassified, expressed SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3468-S.SNP.9:9040576 chr09:009040576 0 W/9040576-9040576 FN3468-S SNP T -> A AC=1;AN=184;BQB=0.977951;DP=3417;DP4=1493,1811,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000585309;MQB=7.61642e-13;MQSB=0.834063;RPB=0.877555;SGB=48.493;VDB=0.892927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q184L|1332|LOC_Os09g15010|protein_coding|CODING|LOC_Os09g15010.1|1|1) FN1097-S.SNP.9:9045254 chr09:009045254 0 W/9045254-9045254 FN1097-S Single Base Substitution A-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2617-S.SNP.9:9050696 chr09:009050696 0 W/9050696-9050696 FN2617-S SNP G -> A AC=1;AN=198;BQB=0.966226;DP=4356;DP4=2275,1873,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20847e-08;MQSB=0.848076;RPB=0.897841;SGB=29.3443;VDB=0.920648;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.9:9056079 chr09:009056079 0 W/9056079-9056079 FN837-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g15020 retrotransposon protein, putative, unclassified, expressed SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3610-S.SNP.9:9056304 chr09:009056304 0 W/9056304-9056304 FN3610-S SNP G -> A AC=2;AN=190;BQB=0.993191;DP=2595;DP4=1100,1403,10,13;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0111753;MQB=0.000482348;MQSB=0.000648391;RPB=0.713402;SGB=99.1879;VDB=0.67201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R572H|1101|LOC_Os09g15020|protein_coding|CODING|LOC_Os09g15020.1|4|1) FN495-S.SNP.9:9061689 chr09:009061689 0 W/9061689-9061689 FN495-S Single Base Substitution A-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3821-S.SNP.9:9069692 chr09:009069692 0 W/9069692-9069692 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.996791;DP=2830;DP4=1391,1290,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0123675;MQB=5.22513e-05;MQSB=1.27874e-05;RPB=0.812548;SGB=67.3108;VDB=0.668172;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K723|755|LOC_Os09g15030|protein_coding|CODING|LOC_Os09g15030.1|11|1) FN2485.SNP.9:9070708 chr09:009070708 0 W/9070708-9070708 FN2485 SNP G -> T AC=1;AN=198;BQB=0.565295;DP=4376;DP4=1969,2114,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000228519;MQB=9.59205e-13;MQSB=0.986283;RPB=0.765492;SGB=86.5007;VDB=0.503723;EFF=INTERGENIC(MODIFIER||||||||||1) FN1680-S.SNP.9:9078997 chr09:009078997 0 W/9078997-9078997 FN1680-S SNP T -> G AC=2;AN=186;BQB=0.399337;DP=2510;DP4=1489,979,12,17;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.56197e-10;MQSB=0.986703;RPB=0.997268;SGB=-75.0128;VDB=0.25231;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.9:9083723 chr09:009083723 0 W/9083723-9083723 FN508-S Single Base Substitution T-A INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN4049-S.SNP.9:9083980 chr09:009083980 0 W/9083980-9083980 FN4049-S SNP A -> G AC=1;AN=168;BQB=0.987123;DP=2679;DP4=1268,1278,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00111982;MQB=6.03624e-05;MQSB=0.444202;RPB=0.585624;SGB=24.4556;VDB=0.392568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.9:9088194 chr09:009088194 0 W/9088194-9088194 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.872796;DP=1845;DP4=953,800,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000490079;MQSB=0.000235229;RPB=0.725518;SGB=13.8578;VDB=0.582309;EFF=UTR_5_PRIME(MODIFIER||346||73|LOC_Os09g15044|protein_coding|CODING|LOC_Os09g15044.1|1|1) FN2210-S.SNP.9:9088754 chr09:009088754 0 W/9088754-9088754 FN2210-S SNP T -> C AC=1;AN=190;BQB=0.853981;DP=4669;DP4=2196,2105,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.37534e-06;MQSB=0.112269;RPB=0.928418;SGB=13.4344;VDB=0.825472;EFF=INTERGENIC(MODIFIER||||||||||1) FN-80.SNP.9:9097210 chr09:009097210 0 W/9097210-9097210 FN-80 Single Base Substitution C-A INTRON HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN-199.SNP.9:9098934 chr09:009098934 0 W/9098934-9098934 FN-199 Single Base Substitution C-T INTRON HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1265-S.SNP.9:9102812 chr09:009102812 0 W/9102812-9102812 FN1265-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3639-S.SNP.9:9103126 chr09:009103126 0 W/9103126-9103126 FN3639-S SNP G -> C AC=1;AN=190;BQB=0.998274;DP=2511;DP4=1303,1109,11,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=7.60506e-05;MQSB=9.43906e-06;RPB=0.146811;SGB=53.6492;VDB=0.662964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.9:9104138 chr09:009104138 0 W/9104138-9104138 FN4188-S SNP G -> A AC=1;AN=170;BQB=0.717951;DP=2392;DP4=1226,1106,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.20279e-09;MQSB=0.897222;RPB=0.577825;SGB=32.0972;VDB=0.3141;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.9:9117637 chr09:009117637 0 W/9117637-9117637 FN-144 Single Base Substitution G-T INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3848-S.SNP.9:9118530 chr09:009118530 0 W/9118530-9118530 FN3848-S SNP C -> G AC=1;AN=158;BQB=0.990673;DP=2124;DP4=989,1049,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.29809e-10;MQSB=0.960036;RPB=0.99699;SGB=64.5449;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.9:9120978 chr09:009120978 0 W/9120978-9120978 FN369-S Single Base Substitution G-A INTRON HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN266-S.SNP.9:9125219 chr09:009125219 0 W/9125219-9125219 FN266-S Single Base Substitution T-G INTERGENIC HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2147-S.SNP.9:9126219 chr09:009126219 0 W/9126219-9126219 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.648644;DP=3038;DP4=1404,1545,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.207871;MQSB=0.999801;RPB=0.828674;SGB=-4.39415;VDB=0.494821;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.9:9126691 chr09:009126691 0 W/9126691-9126691 FN4116-S SNP C -> T AC=1;AN=182;BQB=0.899756;DP=2528;DP4=1348,1086,10,9;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=4.35089e-09;MQSB=4.66826e-17;RPB=0.807502;SGB=80.1982;VDB=0.372496;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.9:9129987 chr09:009129987 0 W/9129987-9129987 FN3595-S SNP C -> G AC=1;AN=190;BQB=0.960714;DP=2895;DP4=1490,1311,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.87064e-06;MQSB=0.993322;RPB=0.857982;SGB=21.8853;VDB=0.107081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.9:9134743 chr09:009134743 0 W/9134743-9134743 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.997944;DP=3517;DP4=1630,1761,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0912e-06;MQSB=0.987685;RPB=0.484518;SGB=48.7425;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.9:9138845 chr09:009138845 0 W/9138845-9138845 FN-214 Single Base Substitution C-A INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2146-S.SNP.9:9144410 chr09:009144410 0 W/9144410-9144410 FN2146-S SNP A -> C AC=1;AN=168;BQB=0.1418;DP=3874;DP4=1858,1927,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.04459e-09;MQSB=0.644868;RPB=0.988009;SGB=14.2064;VDB=0.714334;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.9:9146736 chr09:009146736 0 W/9146736-9146736 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.582564;DP=3848;DP4=1773,1854,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.58337e-14;MQSB=0.998464;RPB=0.678245;SGB=-6.69434;VDB=0.582593;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K68|837|LOC_Os09g15090|protein_coding|CODING|LOC_Os09g15090.1|1|1) FN1619-S.SNP.9:9147209 chr09:009147209 0 W/9147209-9147209 FN1619-S Single Base Substitution G-A INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN553-S.SNP.9:9150320 chr09:009150320 0 W/9150320-9150320 FN553-S Single Base Substitution A-G INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. W7-1-1.SNP.9:9168555 chr09:009168555 0 W/9168555-9168555 W7-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1321-S.SNP.9:9171405 chr09:009171405 0 W/9171405-9171405 FN1321-S Single Base Substitution T-G INTERGENIC HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN1062-S.SNP.9:9172648 chr09:009172648 0 W/9172648-9172648 FN1062-S Single Base Substitution T-C INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2219-S.SNP.9:9177990 chr09:009177990 0 W/9177990-9177990 FN2219-S SNP A -> G AC=1;AN=190;BQB=0.539879;DP=4105;DP4=2054,1557,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.70506e-09;MQSB=0.999297;RPB=0.405198;SGB=28.7675;VDB=0.875057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N301S|903|LOC_Os09g15120|protein_coding|CODING|LOC_Os09g15120.1|2|1) FN3504-S.SNP.9:9179939 chr09:009179939 0 W/9179939-9179939 FN3504-S SNP G -> A AC=2;AN=188;BQB=0.630702;DP=3506;DP4=1667,1663,14,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000570451;MQB=2.3423e-11;MQSB=0.981702;RPB=0.800604;SGB=46.4225;VDB=0.532686;EFF=INTERGENIC(MODIFIER||||||||||1) FN3875-S.SNP.9:9180694 chr09:009180694 0 W/9180694-9180694 FN3875-S SNP C -> T AC=1;AN=158;BQB=0.888134;DP=2776;DP4=1236,1441,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=6.44615e-09;MQSB=0.928152;RPB=0.286347;SGB=57.6596;VDB=0.0831004;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L112|718|LOC_Os09g15130|protein_coding|CODING|LOC_Os09g15130.1|1|1) FN3595-S.SNP.9:9180716 chr09:009180716 0 W/9180716-9180716 FN3595-S SNP T -> A AC=1;AN=190;BQB=0.835218;DP=3028;DP4=1377,1536,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.36756e-05;MQSB=0.512328;RPB=0.921439;SGB=49.0954;VDB=0.859771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L119H|718|LOC_Os09g15130|protein_coding|CODING|LOC_Os09g15130.1|1|1) FN2359.SNP.9:9184455 chr09:009184455 0 W/9184455-9184455 FN2359 SNP C -> G AC=1;AN=192;BQB=0.842313;DP=4421;DP4=2081,2128,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000452386;MQB=5.54214e-10;MQSB=0.995763;RPB=0.565857;SGB=46.9087;VDB=0.0680677;EFF=SPLICE_SITE_REGION(LOW||||752|LOC_Os09g15140|protein_coding|CODING|LOC_Os09g15140.1|6|1),INTRON(MODIFIER||||752|LOC_Os09g15140|protein_coding|CODING|LOC_Os09g15140.1|6|1) FN803-S.SNP.9:9185396 chr09:009185396 0 W/9185396-9185396 FN803-S Single Base Substitution C-G INTRON HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1229-S.SNP.9:9188696 chr09:009188696 0 W/9188696-9188696 FN1229-S Single Base Substitution A-C INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN4258-S.SNP.9:9190287 chr09:009190287 0 W/9190287-9190287 FN4258-S SNP A -> T AC=1;AN=170;BQB=0.946512;DP=2784;DP4=1356,1371,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.000231077;MQSB=0.000113466;RPB=0.996748;SGB=30.1021;VDB=0.585032;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.9:9199750 chr09:009199750 0 W/9199750-9199750 FN782-S Single Base Substitution A-G INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN3536-S.SNP.9:9200535 chr09:009200535 0 W/9200535-9200535 FN3536-S SNP G -> C AC=1;AN=188;BQB=0.934852;DP=2633;DP4=1276,1307,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.4032e-07;MQSB=0.985777;RPB=0.414114;SGB=48.979;VDB=0.00648371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.9:9207900 chr09:009207900 0 W/9207900-9207900 FN1633-S Single Base Substitution A-T SPLICE_SITE_REGION HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2390.SNP.9:9212620 chr09:009212620 0 W/9212620-9212620 FN2390 SNP C -> T AC=2;AN=198;BQB=0.616737;DP=4482;DP4=2213,2027,19,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000669344;MQB=4.36472e-19;MQSB=0.951942;RPB=0.281414;SGB=173.999;VDB=0.0537318;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.9:9213805 chr09:009213805 0 W/9213805-9213805 FN4064-S SNP A -> G AC=1;AN=168;BQB=0.684131;DP=3221;DP4=1542,1360,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.67827e-08;MQSB=0.873977;RPB=0.987744;SGB=-60.2222;VDB=0.215518;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.9:9214657 chr09:009214657 0 W/9214657-9214657 FN_546-3-1 Single Base Substitution C-T Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN-75.SNP.9:9216872 chr09:009216872 0 W/9216872-9216872 FN-75 Single Base Substitution A-G INTRON HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2622-S.SNP.9:9219332 chr09:009219332 0 W/9219332-9219332 FN2622-S SNP A -> G AC=1;AN=200;BQB=0.4108;DP=4078;DP4=1974,1786,20,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74559e-19;MQSB=0.493932;RPB=0.156556;SGB=35.1726;VDB=0.538032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K415E|432|LOC_Os09g15180|protein_coding|CODING|LOC_Os09g15180.1|4|1) FN-101.SNP.9:9225941 chr09:009225941 0 W/9225941-9225941 FN-101 Single Base Substitution G-A INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN874-S.SNP.9:9227551 chr09:009227551 0 W/9227551-9227551 FN874-S Single Base Substitution T-C INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN714-S.SNP.9:9232782 chr09:009232782 0 W/9232782-9232782 FN714-S Single Base Substitution G-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3490-S.SNP.9:9235241 chr09:009235241 0 W/9235241-9235241 FN3490-S SNP T -> G AC=1;AN=184;BQB=0.886456;DP=2821;DP4=1453,1258,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.85816e-08;MQSB=4.50903e-05;RPB=0.829207;SGB=42.7914;VDB=0.136474;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.9:9235777 chr09:009235777 0 W/9235777-9235777 FN2237-S SNP G -> C AC=1;AN=190;BQB=0.767838;DP=4918;DP4=2197,2453,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20253e-07;MQSB=0.959163;RPB=0.694468;SGB=26.2136;VDB=0.365321;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN-386 Single Base Substitution G-C INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1043-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN1043-S Single Base Substitution G-C INTERGENIC HOMO SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1385-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN1385-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1550-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN1550-S Single Base Substitution G-C INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1688-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN1688-S SNP G -> C AC=2;AN=188;BQB=0.291752;DP=3171;DP4=1445,1689,8,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.21658e-09;MQSB=0.980309;RPB=0.99946;SGB=41.3359;VDB=0.765118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN2245-S SNP G -> C AC=2;AN=190;BQB=0.981135;DP=5074;DP4=2308,2397,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.51593e-14;MQSB=0.878731;RPB=0.284432;SGB=117.403;VDB=0.0925999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN3393-S SNP G -> C AC=2;AN=184;BQB=0.941584;DP=3347;DP4=1593,1617,18,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.46652e-16;MQSB=0.9386;RPB=0.787182;SGB=134.656;VDB=0.36035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN3926-S SNP G -> C AC=2;AN=158;BQB=0.997698;DP=2817;DP4=1385,1260,27,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.64514e-27;MQSB=0.993257;RPB=0.829699;SGB=186.142;VDB=0.00117883;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN552-S Single Base Substitution G-C INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN726-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN726-S Single Base Substitution G-C INTERGENIC HOMO SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN820-S.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN820-S Single Base Substitution G-C INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN_798-4-2.SNP.9:9236679 chr09:009236679 0 W/9236679-9236679 FN_798-4-2 Single Base Substitution G-C Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN1623-S.SNP.9:9237013 chr09:009237013 0 W/9237013-9237013 FN1623-S Single Base Substitution A-G INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN918-S.SNP.9:9237590 chr09:009237590 0 W/9237590-9237590 FN918-S Single Base Substitution G-T INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN918-S.SNP.9:9237591 chr09:009237591 0 W/9237591-9237591 FN918-S Single Base Substitution G-T INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3514-S.SNP.9:9238426 chr09:009238426 0 W/9238426-9238426 FN3514-S SNP G -> T AC=1;AN=188;BQB=0.654845;DP=2882;DP4=1426,1361,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0249827;MQB=0.0368469;MQSB=0.131775;RPB=0.908141;SGB=57.244;VDB=0.885982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A88S|1206|LOC_Os09g15220|protein_coding|CODING|LOC_Os09g15220.1|1|1) FN_786-4-1.SNP.9:9241241 chr09:009241241 0 W/9241241-9241241 FN_786-4-1 Single Base Substitution C-T HET LOC_Os09g15220 retrotransposon protein, putative, unclassified, expressed SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3490-S.SNP.9:9243188 chr09:009243188 0 W/9243188-9243188 FN3490-S SNP G -> T AC=1;AN=184;BQB=0.978347;DP=2706;DP4=1334,1273,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00369549;MQB=3.62023e-08;MQSB=0.0868117;RPB=0.72436;SGB=71.3514;VDB=0.5681;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aTt|S987I|1206|LOC_Os09g15220|protein_coding|CODING|LOC_Os09g15220.1|5|1) FN3490-S.SNP.9:9243190 chr09:009243190 0 W/9243190-9243190 FN3490-S SNP A -> T AC=1;AN=184;BQB=0.999704;DP=2719;DP4=1314,1283,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00294226;MQB=2.84533e-08;MQSB=0.145914;RPB=0.981311;SGB=49.835;VDB=0.822234;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M988L|1206|LOC_Os09g15220|protein_coding|CODING|LOC_Os09g15220.1|5|1) FN2705-S.SNP.9:9243727 chr09:009243727 0 W/9243727-9243727 FN2705-S SNP G -> A AC=1;AN=200;BQB=0.854966;DP=4868;DP4=2367,2242,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205423;MQB=9.97764e-14;MQSB=0.530158;RPB=0.577591;SGB=83.5316;VDB=0.609785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1167K|1206|LOC_Os09g15220|protein_coding|CODING|LOC_Os09g15220.1|5|1) FN1375-S.SNP.9:9247880 chr09:009247880 0 W/9247880-9247880 FN1375-S Single Base Substitution T-A INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN-120.SNP.9:9259486 chr09:009259486 0 W/9259486-9259486 FN-120 Single Base Substitution G-A INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1483-S.SNP.9:9263249 chr09:009263249 0 W/9263249-9263249 FN1483-S Single Base Substitution A-G INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1484-S.SNP.9:9265043 chr09:009265043 0 W/9265043-9265043 FN1484-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN2223-S.SNP.9:9265187 chr09:009265187 0 W/9265187-9265187 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.89267;DP=4885;DP4=2369,2255,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.49386e-09;MQSB=0.639719;RPB=0.968173;SGB=26.2136;VDB=0.996531;EFF=START_GAINED(LOW||||371|LOC_Os09g15250|protein_coding|CODING|LOC_Os09g15250.1|1|1),UTR_5_PRIME(MODIFIER||2628||371|LOC_Os09g15250|protein_coding|CODING|LOC_Os09g15250.1|1|1) FN2288.SNP.9:9268311 chr09:009268311 0 W/9268311-9268311 FN2288 SNP A -> G AC=1;AN=192;BQB=0.955358;DP=4861;DP4=2230,2375,4,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.47064e-10;MQSB=0.89301;RPB=0.253443;SGB=46.9087;VDB=0.174785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q166R|371|LOC_Os09g15250|protein_coding|CODING|LOC_Os09g15250.1|1|1) FN-73.SNP.9:9269768 chr09:009269768 0 W/9269768-9269768 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN511-S.SNP.9:9271266 chr09:009271266 0 W/9271266-9271266 FN511-S Single Base Substitution C-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1463-S.SNP.9:9271519 chr09:009271519 0 W/9271519-9271519 FN1463-S Single Base Substitution C-T INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1702-S.SNP.9:9271864 chr09:009271864 0 W/9271864-9271864 FN1702-S SNP C -> T AC=1;AN=188;BQB=0.0139811;DP=3300;DP4=1947,1291,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.36332e-06;MQSB=0.978536;RPB=0.596582;SGB=-36.9078;VDB=0.432721;EFF=INTERGENIC(MODIFIER||||||||||1) FN_776-5-1.SNP.9:9272818 chr09:009272818 0 W/9272818-9272818 FN_776-5-1 Single Base Substitution A-T Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2180-S.SNP.9:9275925 chr09:009275925 0 W/9275925-9275925 FN2180-S SNP A -> T AC=1;AN=190;BQB=0.994153;DP=4454;DP4=2116,1887,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.17352e-12;MQSB=0.650726;RPB=0.682824;SGB=18.096;VDB=0.627333;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.9:9285899 chr09:009285899 0 W/9285899-9285899 FN2432 SNP T -> A AC=1;AN=198;BQB=0.404259;DP=4715;DP4=2334,1999,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=0.00161886;MQSB=0.425188;RPB=0.97963;SGB=77.2904;VDB=0.434613;EFF=INTERGENIC(MODIFIER||||||||||1) FN-81.SNP.9:9286445 chr09:009286445 0 W/9286445-9286445 FN-81 Single Base Substitution A-G INTERGENIC HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN1104-S.SNP.9:9289811 chr09:009289811 0 W/9289811-9289811 FN1104-S Single Base Substitution G-T INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN4108-S.SNP.9:9290169 chr09:009290169 0 W/9290169-9290169 FN4108-S SNP T -> C AC=1;AN=182;BQB=0.330852;DP=2797;DP4=1352,1372,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.47472e-07;MQSB=0.929798;RPB=0.707878;SGB=42.6494;VDB=0.156173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.9:9294905 chr09:009294905 0 W/9294905-9294905 FN2689-S SNP A -> T AC=1;AN=200;BQB=0.790932;DP=4898;DP4=2364,2344,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63311e-13;MQSB=0.932475;RPB=0.962128;SGB=109.527;VDB=0.896097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.9:9296246 chr09:009296246 0 W/9296246-9296246 FN2137-S SNP G -> T AC=2;AN=166;BQB=0.684599;DP=3976;DP4=1838,2065,24,33;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=3.07087e-28;MQSB=0.944112;RPB=0.498088;SGB=-305.695;VDB=0.091924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.9:9298334 chr09:009298334 0 W/9298334-9298334 FN2429 SNP T -> C AC=2;AN=198;BQB=0.871017;DP=4698;DP4=2514,1773,21,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.09992e-20;MQSB=0.319976;RPB=0.980423;SGB=86.7987;VDB=0.621736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.9:9306185 chr09:009306185 0 W/9306185-9306185 FN2288 SNP G -> C AC=1;AN=192;BQB=0.968534;DP=4738;DP4=2162,2173,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00126636;MQB=2.14622e-18;MQSB=0.786641;RPB=0.997468;SGB=-242.346;VDB=0.139241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.9:9307321 chr09:009307321 0 W/9307321-9307321 FN2380 SNP C -> A AC=1;AN=192;BQB=0.0547066;DP=5391;DP4=2551,2321,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.38712e-06;MQSB=2.32897e-06;RPB=0.496739;SGB=-95.9313;VDB=0.749354;EFF=INTERGENIC(MODIFIER||||||||||1) FN1228-S.SNP.9:9307587 chr09:009307587 0 W/9307587-9307587 FN1228-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3903-S.SNP.9:9307587 chr09:009307587 0 W/9307587-9307587 FN3903-S SNP G -> T AC=2;AN=158;BQB=0.779392;DP=2516;DP4=1096,1313,10,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.6503e-15;MQSB=0.849918;RPB=0.994812;SGB=56.991;VDB=0.220736;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.9:9307587 chr09:009307587 0 W/9307587-9307587 FN4279-S SNP G -> T AC=2;AN=170;BQB=0.3452;DP=2418;DP4=1075,1256,12,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.54657e-13;MQSB=0.960478;RPB=0.759343;SGB=12.9884;VDB=0.860354;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.9:9307587 chr09:009307587 0 W/9307587-9307587 FN779-S Single Base Substitution G-T INTERGENIC HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3515-S.SNP.9:9309535 chr09:009309535 0 W/9309535-9309535 FN3515-S SNP G -> A AC=1;AN=188;BQB=0.999939;DP=4051;DP4=1828,2148,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.96242e-11;MQSB=0.933938;RPB=0.766416;SGB=80.782;VDB=0.771215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G78R|1557|LOC_Os09g15270|protein_coding|CODING|LOC_Os09g15270.1|2|1) FN2614-S.SNP.9:9311102 chr09:009311102 0 W/9311102-9311102 FN2614-S SNP C -> T AC=1;AN=198;BQB=0.921361;DP=3913;DP4=1826,1910,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000255558;MQB=8.72258e-08;MQSB=1;RPB=0.544927;SGB=40.149;VDB=0.579538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R501C|1557|LOC_Os09g15270|protein_coding|CODING|LOC_Os09g15270.1|5|1) FN4084-S.SNP.9:9314351 chr09:009314351 0 W/9314351-9314351 FN4084-S SNP G -> T AC=2;AN=182;BQB=0.371676;DP=2999;DP4=1470,1446,11,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.95724e-09;MQSB=0.956627;RPB=0.701636;SGB=84.7091;VDB=0.159721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A1392S|1557|LOC_Os09g15270|protein_coding|CODING|LOC_Os09g15270.1|9|1) FN2468.SNP.9:9316953 chr09:009316953 0 W/9316953-9316953 FN2468 SNP G -> A AC=1;AN=198;BQB=0.814905;DP=4106;DP4=2090,1732,11,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22244e-07;MQSB=0.939184;RPB=0.594995;SGB=3.06925;VDB=0.0708043;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.9:9317423 chr09:009317423 0 W/9317423-9317423 FN632-S Single Base Substitution G-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN3773-S.SNP.9:9325055 chr09:009325055 0 W/9325055-9325055 FN3773-S SNP T -> A AC=2;AN=190;BQB=0.533692;DP=1756;DP4=1112,580,15,4;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.0609339;MQB=0.881837;MQSB=4.67235e-37;RPB=0.929319;SGB=33.8752;VDB=0.720337;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.9:9338407 chr09:009338407 0 W/9338407-9338407 FN3376-S SNP A -> G AC=1;AN=184;BQB=0.723702;DP=2560;DP4=1224,1254,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.24314e-08;MQSB=0.858779;RPB=0.0784484;SGB=46.3132;VDB=0.325278;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.9:9343191 chr09:009343191 0 W/9343191-9343191 FN-293 Single Base Substitution A-G INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2304.SNP.9:9343285 chr09:009343285 0 W/9343285-9343285 FN2304 SNP T -> C AC=1;AN=192;BQB=0.196807;DP=5427;DP4=2597,2555,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.000209348;MQSB=0.353913;RPB=0.436721;SGB=43.3444;VDB=0.706974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.9:9345783 chr09:009345783 0 W/9345783-9345783 FN1301-S Single Base Substitution A-G INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2498.SNP.9:9348074 chr09:009348074 0 W/9348074-9348074 FN2498 SNP C -> T AC=1;AN=198;BQB=0.0774387;DP=3939;DP4=1729,1904,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000253872;MQB=4.58765e-07;MQSB=7.80802e-08;RPB=0.987666;SGB=3.06925;VDB=0.614964;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.9:9350135 chr09:009350135 0 W/9350135-9350135 FN1277-S Single Base Substitution G-A INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3368-S.SNP.9:9354387 chr09:009354387 0 W/9354387-9354387 FN3368-S SNP C -> G AC=2;AN=184;BQB=0.641313;DP=3055;DP4=1577,1339,28,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.89315e-17;MQSB=0.788212;RPB=0.832602;SGB=152.744;VDB=0.689317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.9:9358395 chr09:009358395 0 W/9358395-9358395 FN-237 Single Base Substitution G-A INTRON HOMO SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN1205-S.SNP.9:9360103 chr09:009360103 0 W/9360103-9360103 FN1205-S Single Base Substitution G-A INTRON HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2198-S.SNP.9:9365655 chr09:009365655 0 W/9365655-9365655 FN2198-S SNP T -> C AC=1;AN=190;BQB=0.942133;DP=5052;DP4=2246,2479,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000202793;MQSB=0.248718;RPB=0.382234;SGB=28.7675;VDB=0.633854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.9:9366622 chr09:009366622 0 W/9366622-9366622 FN2758-S SNP A -> G AC=1;AN=200;BQB=0.448551;DP=4256;DP4=2052,1832,7,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.150884;MQSB=0.991864;RPB=0.783224;SGB=-34.9207;VDB=0.723549;EFF=SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L531|541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|Tta/Cta|L531|541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.2|4|1) FN_812-4-1.SNP.9:9367809 chr09:009367809 0 W/9367809-9367809 FN_812-4-1 Single Base Substitution A-C Homo LOC_Os09g15330 transporter family protein, putative, expressed SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2790-S.SNP.9:9369421 chr09:009369421 0 W/9369421-9369421 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.739005;DP=4048;DP4=1719,2080,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=1.28077e-05;MQSB=0.333332;RPB=0.891671;SGB=54.144;VDB=0.78715;EFF=INTRON(MODIFIER||||541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.1|2|1),INTRON(MODIFIER||||541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.2|2|1) FN4099-S.SNP.9:9369984 chr09:009369984 0 W/9369984-9369984 FN4099-S SNP A -> C AC=1;AN=182;BQB=0.779298;DP=2243;DP4=932,1103,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.000445831;MQB=0.00165887;MQSB=0.0718639;RPB=0.686088;SGB=30.5793;VDB=0.575705;EFF=UTR_5_PRIME(MODIFIER||111||541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.1|2|1),UTR_5_PRIME(MODIFIER||111||541|LOC_Os09g15330|protein_coding|CODING|LOC_Os09g15330.2|2|1) FN1040-S.SNP.9:9379530 chr09:009379530 0 W/9379530-9379530 FN1040-S Single Base Substitution A-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2122-S.SNP.9:9383424 chr09:009383424 0 W/9383424-9383424 FN2122-S SNP C -> T AC=2;AN=166;BQB=0.265942;DP=2089;DP4=573,1479,5,12;HOB=0.0238061;ICB=0.494049;MQ=38;MQ0F=0;MQB=0.00152261;MQSB=0.449893;RPB=0.854233;SGB=48.4712;VDB=0.844755;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K89|366|LOC_Os09g15340|protein_coding|CODING|LOC_Os09g15340.1|2|1) FN497-S.SNP.9:9419816 chr09:009419816 0 W/9419816-9419816 FN497-S Single Base Substitution C-T INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1504-S.SNP.9:9421770 chr09:009421770 0 W/9421770-9421770 FN1504-S Single Base Substitution C-T INTRON Homo SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN-390.SNP.9:9422503 chr09:009422503 0 W/9422503-9422503 FN-390 Single Base Substitution C-A UTR_3_PRIME HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3796-S.SNP.9:9431014 chr09:009431014 0 W/9431014-9431014 FN3796-S SNP G -> A AC=1;AN=190;BQB=0.98901;DP=2617;DP4=1217,1314,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000165396;MQSB=0.8392;RPB=0.763609;SGB=35.4339;VDB=0.622626;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.9:9437757 chr09:009437757 0 W/9437757-9437757 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.999623;DP=2508;DP4=1124,1312,3,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0465e-09;MQSB=0.957373;RPB=0.534601;SGB=61.2001;VDB=0.113877;EFF=UTR_3_PRIME(MODIFIER||257||369|LOC_Os09g15420|protein_coding|CODING|LOC_Os09g15420.1|9|1) FN3677-S.SNP.9:9442664 chr09:009442664 0 W/9442664-9442664 FN3677-S SNP T -> C AC=1;AN=190;BQB=7.14052e-05;DP=1845;DP4=840,872,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0294223;MQSB=0.684431;RPB=0.988101;SGB=28.9929;VDB=0.387541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.9:9458585 chr09:009458585 0 W/9458585-9458585 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.868918;DP=3303;DP4=1454,1688,10,17;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.76306e-08;MQSB=0.430966;RPB=0.978886;SGB=53.5365;VDB=0.0206726;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.9:9466377 chr09:009466377 0 W/9466377-9466377 FN765-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN503-S.SNP.9:9469134 chr09:009469134 0 W/9469134-9469134 FN503-S Single Base Substitution G-A INTRON HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN4305-S.SNP.9:9469625 chr09:009469625 0 W/9469625-9469625 FN4305-S SNP T -> G AC=1;AN=170;BQB=0.779971;DP=2315;DP4=1368,841,13,7;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00907127;MQB=1.63868e-06;MQSB=0.822913;RPB=0.325247;SGB=83.4133;VDB=0.524808;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K455T|1591|LOC_Os09g15470|protein_coding|CODING|LOC_Os09g15470.1|4|1) FN3913-S.SNP.9:9470411 chr09:009470411 0 W/9470411-9470411 FN3913-S SNP A -> G AC=1;AN=158;BQB=0.772661;DP=2751;DP4=1412,1183,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00472555;MQB=0.000928253;MQSB=1.29406e-10;RPB=0.678847;SGB=26.1881;VDB=0.301309;EFF=INTRON(MODIFIER||||1591|LOC_Os09g15470|protein_coding|CODING|LOC_Os09g15470.1|2|1) FN1673-S.SNP.9:9473036 chr09:009473036 0 W/9473036-9473036 FN1673-S SNP T -> C AC=1;AN=188;BQB=0.430756;DP=2412;DP4=1439,950,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.193615;MQB=0.815644;MQSB=4.24497e-16;RPB=0.696399;SGB=20.9896;VDB=0.806879;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.9:9473120 chr09:009473120 0 W/9473120-9473120 FN4002-S SNP C -> T AC=2;AN=168;BQB=0.989021;DP=2652;DP4=1232,1279,14,22;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.118401;MQB=0.811037;MQSB=1.83354e-27;RPB=0.878191;SGB=32.807;VDB=0.180407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.9:9473497 chr09:009473497 0 W/9473497-9473497 FN4129-S SNP T -> A AC=1;AN=182;BQB=0.79851;DP=3330;DP4=1449,1544,11,11;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0981982;MQB=0.685835;MQSB=1.13412e-05;RPB=0.552636;SGB=40.7201;VDB=0.698292;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.9:9474505 chr09:009474505 0 W/9474505-9474505 FN-206 Single Base Substitution C-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3955-S.SNP.9:9490499 chr09:009490499 0 W/9490499-9490499 FN3955-S SNP C -> T AC=1;AN=168;BQB=0.996867;DP=2890;DP4=1460,1298,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.5058e-10;MQSB=3.13823e-05;RPB=0.00564215;SGB=74.3269;VDB=0.00254951;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.9:9490704 chr09:009490704 0 W/9490704-9490704 FN1217-S Single Base Substitution G-A INTRON HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3749-S.SNP.9:9493142 chr09:009493142 0 W/9493142-9493142 FN3749-S SNP T -> G AC=1;AN=190;BQB=0.967111;DP=2728;DP4=1122,1485,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=0.000126593;MQSB=0.212504;RPB=0.727634;SGB=44.5415;VDB=0.525132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.9:9499027 chr09:009499027 0 W/9499027-9499027 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.995697;DP=3688;DP4=2221,1329,23,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.26753e-21;MQSB=0.93157;RPB=0.998805;SGB=121.023;VDB=0.376141;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A2|441|LOC_Os09g15540|protein_coding|CODING|LOC_Os09g15540.1|1|1) FN3383-S.SNP.9:9505429 chr09:009505429 0 W/9505429-9505429 FN3383-S SNP T -> A AC=2;AN=184;BQB=0.879936;DP=3845;DP4=1974,1624,22,30;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=4.16804e-19;MQSB=0.00352667;RPB=0.874671;SGB=173.098;VDB=0.417315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.9:9507675 chr09:009507675 0 W/9507675-9507675 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2481.SNP.9:9510203 chr09:009510203 0 W/9510203-9510203 FN2481 SNP C -> A AC=1;AN=198;BQB=0.406819;DP=4189;DP4=1952,1848,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000147737;MQSB=0.136195;RPB=0.998425;SGB=8.64371;VDB=0.911295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1329-S.SNP.9:9517631 chr09:009517631 0 W/9517631-9517631 FN1329-S Single Base Substitution C-T INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN_546-3-1.SNP.9:9521935 chr09:009521935 0 W/9521935-9521935 FN_546-3-1 Single Base Substitution G-A Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN4176-S.SNP.9:9534294 chr09:009534294 0 W/9534294-9534294 FN4176-S SNP C -> A AC=1;AN=170;BQB=0.998904;DP=2461;DP4=1119,1275,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0113775;MQB=0.00779711;MQSB=0.937766;RPB=0.887129;SGB=38.3207;VDB=0.778596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G55V|197|LOC_Os09g15620|protein_coding|CODING|LOC_Os09g15620.1|2|1) FN3778-S.SNP.9:9539162 chr09:009539162 0 W/9539162-9539162 FN3778-S SNP A -> T AC=1;AN=190;BQB=0.989658;DP=1834;DP4=797,941,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000545256;MQB=0.000142628;MQSB=0.0253391;RPB=0.355994;SGB=39.9877;VDB=0.821672;EFF=INTRON(MODIFIER||||667|LOC_Os09g15630|protein_coding|CODING|LOC_Os09g15630.1|1|1) FN1217-S.SNP.9:9545857 chr09:009545857 0 W/9545857-9545857 FN1217-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3956-S.SNP.9:9556202 chr09:009556202 0 W/9556202-9556202 FN3956-S SNP G -> A AC=2;AN=168;BQB=0.870789;DP=2238;DP4=899,1191,7,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.01544e-08;MQSB=0.74894;RPB=0.500157;SGB=78.7577;VDB=0.127566;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T6M|408|LOC_Os09g15660|protein_coding|CODING|LOC_Os09g15660.1|1|1) FN1505-S.SNP.9:9557576 chr09:009557576 0 W/9557576-9557576 FN1505-S Single Base Substitution T-G INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN581-S.SNP.9:9564160 chr09:009564160 0 W/9564160-9564160 FN581-S Single Base Substitution A-C INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2472.SNP.9:9567390 chr09:009567390 0 W/9567390-9567390 FN2472 SNP C -> G AC=1;AN=200;BQB=0.976479;DP=4074;DP4=1600,2090,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.87434e-12;MQSB=0.426539;RPB=0.983953;SGB=69.1109;VDB=0.997308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.9:9568501 chr09:009568501 0 W/9568501-9568501 FN2488 SNP C -> T AC=2;AN=200;BQB=0.0912133;DP=4069;DP4=2076,1709,23,17;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=5.73515e-10;MQSB=0.00030245;RPB=0.0342029;SGB=134.004;VDB=0.0247964;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L317|358|LOC_Os09g15670|protein_coding|CODING|LOC_Os09g15670.1|1|1) FN-399.SNP.9:9572760 chr09:009572760 0 W/9572760-9572760 FN-399 Single Base Substitution C-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.9:9572760 chr09:009572760 0 W/9572760-9572760 FN399-S Single Base Substitution C-T INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN-168.SNP.9:9581375 chr09:009581375 0 W/9581375-9581375 FN-168 Single Base Substitution T-A INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1345-S.SNP.9:9586608 chr09:009586608 0 W/9586608-9586608 FN1345-S Single Base Substitution C-T INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1068-S.SNP.9:9588977 chr09:009588977 0 W/9588977-9588977 FN1068-S Single Base Substitution T-C INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2278-S.SNP.9:9590529 chr09:009590529 0 W/9590529-9590529 FN2278-S SNP T -> C AC=1;AN=190;BQB=0.975429;DP=4266;DP4=1936,1959,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=2.63513e-08;MQSB=0.00827757;RPB=0.421941;SGB=149.281;VDB=0.302172;EFF=INTRON(MODIFIER||||98|LOC_Os09g15710|protein_coding|CODING|LOC_Os09g15710.1|2|1) FN2081-S.SNP.9:9592814 chr09:009592814 0 W/9592814-9592814 FN2081-S SNP C -> T AC=2;AN=168;BQB=0.947932;DP=3331;DP4=1713,1476,24,20;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0;MQB=1.43645e-11;MQSB=6.23172e-05;RPB=0.898169;SGB=44.2536;VDB=0.0774491;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.9:9593480 chr09:009593480 0 W/9593480-9593480 FN1643-S Single Base Substitution C-A INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN876-S.SNP.9:9597716 chr09:009597716 0 W/9597716-9597716 FN876-S Single Base Substitution G-A INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN416-S.SNP.9:9597736 chr09:009597736 0 W/9597736-9597736 FN416-S Single Base Substitution A-C INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN856-S.SNP.9:9599160 chr09:009599160 0 W/9599160-9599160 FN856-S Single Base Substitution G-A INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN1519-S.SNP.9:9599487 chr09:009599487 0 W/9599487-9599487 FN1519-S Single Base Substitution C-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2457.SNP.9:9606349 chr09:009606349 0 W/9606349-9606349 FN2457 SNP T -> C AC=1;AN=200;BQB=0.966493;DP=4609;DP4=2123,2115,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.16837e-13;MQSB=0.977543;RPB=0.538919;SGB=65.5058;VDB=0.0251487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.9:9607758 chr09:009607758 0 W/9607758-9607758 FN2103-S SNP T -> C AC=1;AN=168;BQB=0.0990419;DP=4138;DP4=1960,2146,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=4.46809e-07;MQSB=0.940847;RPB=0.985948;SGB=-101.503;VDB=0.617891;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.9:9612539 chr09:009612539 0 W/9612539-9612539 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN416-S.SNP.9:9617490 chr09:009617490 0 W/9617490-9617490 FN416-S Single Base Substitution G-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2646-S.SNP.9:9630881 chr09:009630881 0 W/9630881-9630881 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.871701;DP=5028;DP4=2360,2417,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000198886;MQB=2.96666e-15;MQSB=0.716809;RPB=0.985104;SGB=-38.0794;VDB=0.292086;EFF=INTRON(MODIFIER||||177|LOC_Os09g15760|protein_coding|CODING|LOC_Os09g15760.1|2|1) FN1702-S.SNP.9:9640482 chr09:009640482 0 W/9640482-9640482 FN1702-S SNP A -> G AC=1;AN=188;BQB=0.00169137;DP=4130;DP4=1892,2205,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.24282e-06;MQSB=0.985151;RPB=0.567949;SGB=-37.8212;VDB=0.654564;EFF=INTRON(MODIFIER||||295|LOC_Os09g15780|protein_coding|CODING|LOC_Os09g15780.1|3|1) FN426-S.SNP.9:9649713 chr09:009649713 0 W/9649713-9649713 FN426-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g15800 tetratricopeptide-like helical, putative, expressed SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3513-S.SNP.9:9650266 chr09:009650266 0 W/9650266-9650266 FN3513-S SNP A -> G AC=2;AN=188;BQB=0.0557592;DP=3852;DP4=1520,2076,23,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.36419e-12;MQSB=0.599382;RPB=0.649369;SGB=-125.748;VDB=0.761407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S28P|755|LOC_Os09g15800|protein_coding|CODING|LOC_Os09g15800.1|1|1) FN3821-S.SNP.9:9652758 chr09:009652758 0 W/9652758-9652758 FN3821-S SNP A -> G AC=1;AN=190;BQB=0.925679;DP=2684;DP4=1246,1287,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26496e-08;MQSB=0.465753;RPB=0.28291;SGB=43.2083;VDB=0.641714;EFF=INTRON(MODIFIER||||395|LOC_Os09g15810|protein_coding|CODING|LOC_Os09g15810.1|1|1) FN2665-S.SNP.9:9658128 chr09:009658128 0 W/9658128-9658128 FN2665-S SNP C -> G AC=2;AN=200;BQB=0.660132;DP=5085;DP4=2376,2407,24,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.39619e-36;MQSB=0.744354;RPB=0.998729;SGB=261.497;VDB=0.788544;EFF=INTRON(MODIFIER||||319|LOC_Os09g15820|protein_coding|CODING|LOC_Os09g15820.1|2|1),INTRON(MODIFIER||||223|LOC_Os09g15820|protein_coding|CODING|LOC_Os09g15820.2|2|1) FN2665-S.SNP.9:9658135 chr09:009658135 0 W/9658135-9658135 FN2665-S SNP A -> G AC=2;AN=200;BQB=0.489839;DP=5081;DP4=2368,2445,22,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.9679e-34;MQSB=0.640225;RPB=0.976069;SGB=184.476;VDB=0.343088;EFF=INTRON(MODIFIER||||319|LOC_Os09g15820|protein_coding|CODING|LOC_Os09g15820.1|2|1),INTRON(MODIFIER||||223|LOC_Os09g15820|protein_coding|CODING|LOC_Os09g15820.2|2|1) FN865-S.SNP.9:9672269 chr09:009672269 0 W/9672269-9672269 FN865-S Single Base Substitution C-T INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN1000-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN1000-S Single Base Substitution G-T INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2496.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN2496 SNP G -> T AC=1;AN=200;BQB=0.955877;DP=3911;DP4=1992,1658,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91409e-08;MQSB=0.75114;RPB=0.980927;SGB=36.6644;VDB=0.490297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN2666-S SNP G -> T AC=2;AN=200;BQB=0.325469;DP=4287;DP4=2220,1836,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22723e-26;MQSB=0.925371;RPB=0.996263;SGB=201.63;VDB=0.785734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.751603;DP=3813;DP4=2084,1514,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.50462e-18;MQSB=0.626756;RPB=0.202944;SGB=26.8957;VDB=0.596402;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN3715-S SNP G -> T AC=2;AN=190;BQB=0.878595;DP=2243;DP4=1084,1073,13,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.75094e-11;MQSB=0.615113;RPB=0.972553;SGB=53.8699;VDB=0.0229026;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN706-S Single Base Substitution G-T INTERGENIC HOMO SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN993-S.SNP.9:9676857 chr09:009676857 0 W/9676857-9676857 FN993-S Single Base Substitution G-T INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2485.SNP.9:9677571 chr09:009677571 0 W/9677571-9677571 FN2485 SNP T -> C AC=1;AN=200;BQB=0.952735;DP=5055;DP4=2544,2193,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.87609e-09;MQSB=0.919849;RPB=0.583613;SGB=54.6902;VDB=0.509281;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.9:9684611 chr09:009684611 0 W/9684611-9684611 FN2174-S SNP G -> A AC=1;AN=168;BQB=0.01982;DP=2987;DP4=1111,1828,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.23473e-05;MQSB=0.962899;RPB=0.690897;SGB=-1.53256;VDB=0.931032;EFF=INTRON(MODIFIER||||996|LOC_Os09g15850|protein_coding|CODING|LOC_Os09g15850.1|4|1) FN2577-S.SNP.9:9692478 chr09:009692478 0 W/9692478-9692478 FN2577-S SNP T -> A AC=1;AN=198;BQB=0.320233;DP=4028;DP4=1858,1910,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.949e-05;MQSB=0.00148662;RPB=0.999482;SGB=36.5539;VDB=0.90102;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.9:9695985 chr09:009695985 0 W/9695985-9695985 FN805-S Single Base Substitution C-G INTERGENIC HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2467.SNP.9:9696165 chr09:009696165 0 W/9696165-9696165 FN2467 SNP C -> T AC=2;AN=200;BQB=0.91347;DP=5257;DP4=2271,2434,29,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.1093e-34;MQSB=0.16827;RPB=0.876256;SGB=-198.257;VDB=0.724126;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.9:9699444 chr09:009699444 0 W/9699444-9699444 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.987973;DP=2558;DP4=1281,1208,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.000313463;MQSB=0.148154;RPB=0.773365;SGB=35.0899;VDB=0.964721;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.9:9709119 chr09:009709119 0 W/9709119-9709119 FN_814-7-1 Single Base Substitution C-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1423-S.SNP.9:9709317 chr09:009709317 0 W/9709317-9709317 FN1423-S Single Base Substitution A-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2332.SNP.9:9710065 chr09:009710065 0 W/9710065-9710065 FN2332 SNP G -> T AC=1;AN=192;BQB=0.654658;DP=6044;DP4=3097,2449,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0972866;MQB=0.955996;MQSB=0;RPB=0.349472;SGB=41.7357;VDB=0.312946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.9:9710066 chr09:009710066 0 W/9710066-9710066 FN2332 SNP A -> C AC=1;AN=192;BQB=0.813133;DP=6063;DP4=2751,2396,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0888999;MQB=0.899167;MQSB=0;RPB=0.381457;SGB=44.3;VDB=0.46276;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.9:9710730 chr09:009710730 0 W/9710730-9710730 FN-126 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g15890 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3039-S.SNP.9:9710730 chr09:009710730 0 W/9710730-9710730 FN3039-S SNP C -> T AC=1;AN=184;BQB=0.817514;DP=4868;DP4=2539,2178,18,21;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0412901;MQB=4.81773e-06;MQSB=0.00585897;RPB=0.965001;SGB=127.314;VDB=0.186136;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R176C|401|LOC_Os09g15890|protein_coding|CODING|LOC_Os09g15890.1|1|1) FN3913-S.SNP.9:9710730 chr09:009710730 0 W/9710730-9710730 FN3913-S SNP C -> T AC=1;AN=158;BQB=0.924789;DP=3268;DP4=1778,1369,14,13;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0.0400857;MQB=0.00785502;MQSB=1;RPB=0.987976;SGB=112.609;VDB=0.851322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R176C|401|LOC_Os09g15890|protein_coding|CODING|LOC_Os09g15890.1|1|1) FN4235-S.SNP.9:9710730 chr09:009710730 0 W/9710730-9710730 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.879302;DP=3057;DP4=1651,1327,8,13;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0402355;MQB=0.00144426;MQSB=0.911505;RPB=0.120839;SGB=87.856;VDB=0.832123;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R176C|401|LOC_Os09g15890|protein_coding|CODING|LOC_Os09g15890.1|1|1) FN2729-S.SNP.9:9711270 chr09:009711270 0 W/9711270-9711270 FN2729-S SNP T -> C AC=2;AN=200;BQB=0.377051;DP=5454;DP4=2214,2885,29,18;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.0146681;MQB=1.46861e-08;MQSB=1.4468e-28;RPB=0.922201;SGB=107.64;VDB=0.361115;EFF=INTRON(MODIFIER||||401|LOC_Os09g15890|protein_coding|CODING|LOC_Os09g15890.1|1|1) FN935-S.SNP.9:9713483 chr09:009713483 0 W/9713483-9713483 FN935-S Single Base Substitution C-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN-285.SNP.9:9715581 chr09:009715581 0 W/9715581-9715581 FN-285 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g15900 retrotransposon protein, putative, unclassified, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3834-S.SNP.9:9715872 chr09:009715872 0 W/9715872-9715872 FN3834-S SNP T -> G AC=2;AN=190;BQB=0.838293;DP=2275;DP4=1101,1023,11,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00263736;MQB=2.38007e-11;MQSB=0.509354;RPB=0.394835;SGB=108.296;VDB=0.705238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L660R|869|LOC_Os09g15900|protein_coding|CODING|LOC_Os09g15900.1|3|1) FN764-S.SNP.9:9717118 chr09:009717118 0 W/9717118-9717118 FN764-S Single Base Substitution C-T INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN3516-S.SNP.9:9718462 chr09:009718462 0 W/9718462-9718462 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.317747;DP=4266;DP4=1910,2245,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.51801e-07;MQSB=0.894442;RPB=0.799451;SGB=80.782;VDB=0.753845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2680-S.SNP.9:9725133 chr09:009725133 0 W/9725133-9725133 FN2680-S SNP C -> A AC=1;AN=200;BQB=0.773991;DP=4057;DP4=2013,1727,14,18;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00147893;MQB=2.3881e-07;MQSB=3.32189e-10;RPB=0.863341;SGB=105.163;VDB=0.8672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.9:9725512 chr09:009725512 0 W/9725512-9725512 FN1401-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3283-S.SNP.9:9733096 chr09:009733096 0 W/9733096-9733096 FN3283-S SNP G -> A AC=2;AN=184;BQB=0.970292;DP=2814;DP4=1343,1367,6,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.0010661;MQB=1.47316e-08;MQSB=0.547774;RPB=0.441845;SGB=75.8731;VDB=0.547011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.9:9735843 chr09:009735843 0 W/9735843-9735843 FN2742-S SNP G -> A AC=2;AN=200;BQB=0.321879;DP=4502;DP4=2138,2122,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.59577e-13;MQSB=0.994954;RPB=0.771322;SGB=52.9314;VDB=0.984982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.9:9737781 chr09:009737781 0 W/9737781-9737781 FN3991-S SNP C -> T AC=1;AN=168;BQB=0.972036;DP=2941;DP4=1134,1682,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.07244e-07;MQSB=0.997777;RPB=0.996128;SGB=12.4615;VDB=0.147453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.9:9737785 chr09:009737785 0 W/9737785-9737785 FN3991-S SNP A -> G AC=1;AN=168;BQB=0.716584;DP=2939;DP4=1092,1663,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.59174e-08;MQSB=0.993792;RPB=0.921787;SGB=-1.53256;VDB=0.448272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.9:9740365 chr09:009740365 0 W/9740365-9740365 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.85333;DP=2733;DP4=1192,1455,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.96944e-08;MQSB=0.990576;RPB=0.759025;SGB=66.8296;VDB=0.547775;EFF=INTRON(MODIFIER||||339|LOC_Os09g15940|protein_coding|CODING|LOC_Os09g15940.1|1|1) FN2477.SNP.9:9743375 chr09:009743375 0 W/9743375-9743375 FN2477 SNP G -> T AC=1;AN=200;BQB=0.48375;DP=4235;DP4=2095,1991,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.49463e-07;MQSB=0.999049;RPB=0.92275;SGB=45.0543;VDB=0.699882;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V480|637|LOC_Os09g15950|protein_coding|CODING|LOC_Os09g15950.1|6|1) FN-16.SNP.9:9743943 chr09:009743943 0 W/9743943-9743943 FN-16 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN1737-S.SNP.9:9744082 chr09:009744082 0 W/9744082-9744082 FN1737-S SNP G -> T AC=1;AN=188;BQB=0.621264;DP=3491;DP4=1883,1561,19,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.10937e-14;MQSB=0.996505;RPB=0.835511;SGB=-6.85034;VDB=0.0314039;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S274*|637|LOC_Os09g15950|protein_coding|CODING|LOC_Os09g15950.1|5|1);LOF=(LOC_Os09g15950|LOC_Os09g15950|1|1.00);NMD=(LOC_Os09g15950|LOC_Os09g15950|1|1.00) FN4154-S.SNP.9:9753363 chr09:009753363 0 W/9753363-9753363 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.189505;DP=2308;DP4=1185,1053,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.98482e-06;MQSB=0.477605;RPB=0.885494;SGB=74.528;VDB=0.961479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D702N|815|LOC_Os09g15960|protein_coding|CODING|LOC_Os09g15960.1|2|1) 707-7.SNP.9:9754776 chr09:009754776 0 W/9754776-9754776 707-7 Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os09g15960 retrotransposon protein, putative, unclassified, expressed SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN2265-S.SNP.9:9754910 chr09:009754910 0 W/9754910-9754910 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.835143;DP=4795;DP4=2355,2156,20,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=5.16135e-14;MQSB=0.62283;RPB=0.57622;SGB=100.07;VDB=0.144372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P206S|815|LOC_Os09g15960|protein_coding|CODING|LOC_Os09g15960.1|1|1) FN-299.SNP.9:9760900 chr09:009760900 0 W/9760900-9760900 FN-299 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g15970 expressed protein SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2205-S.SNP.9:9763431 chr09:009763431 0 W/9763431-9763431 FN2205-S SNP G -> C AC=1;AN=190;BQB=0.524684;DP=4764;DP4=2228,2173,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209908;MQB=9.44345e-16;MQSB=0.847623;RPB=0.957067;SGB=21.2038;VDB=0.935355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.9:9765832 chr09:009765832 0 W/9765832-9765832 FN3288-S SNP G -> A AC=1;AN=184;BQB=0.979947;DP=2330;DP4=603,1576,2,16;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000858369;MQB=3.59484e-10;MQSB=1.04696e-06;RPB=0.9488;SGB=53.3568;VDB=0.398318;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.9:9765833 chr09:009765833 0 W/9765833-9765833 FN3288-S SNP G -> A AC=1;AN=184;BQB=0.993735;DP=2311;DP4=609,1559,2,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000865426;MQB=1.11372e-09;MQSB=4.49237e-07;RPB=0.999676;SGB=71.3514;VDB=0.363883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.9:9766932 chr09:009766932 0 W/9766932-9766932 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.384961;DP=3464;DP4=1827,1601,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.01508e-05;MQSB=0.999703;RPB=0.966124;SGB=-15.8033;VDB=0.383641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.9:9767804 chr09:009767804 0 W/9767804-9767804 FN1203-S Single Base Substitution T-A INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-176.SNP.9:9774068 chr09:009774068 0 W/9774068-9774068 FN-176 Single Base Substitution G-A INTRON HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN-92.SNP.9:9777051 chr09:009777051 0 W/9777051-9777051 FN-92 Single Base Substitution G-A INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-163.SNP.9:9780718 chr09:009780718 0 W/9780718-9780718 FN-163 Single Base Substitution A-G INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN933-S.SNP.9:9781911 chr09:009781911 0 W/9781911-9781911 FN933-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g16010 BURP domain containing protein, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3310-S.SNP.9:9791393 chr09:009791393 0 W/9791393-9791393 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.999999;DP=3964;DP4=1853,1961,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55501e-10;MQSB=0.99643;RPB=0.639306;SGB=75.8731;VDB=0.987415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P272L|501|LOC_Os09g16030|protein_coding|CODING|LOC_Os09g16030.1|1|1) FN1749-S.SNP.9:9795933 chr09:009795933 0 W/9795933-9795933 FN1749-S SNP A -> T AC=1;AN=188;BQB=0.531834;DP=3929;DP4=2045,1848,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.8086e-09;MQSB=0.989339;RPB=0.0739704;SGB=-38.278;VDB=0.361565;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.9:9797560 chr09:009797560 0 W/9797560-9797560 FN568-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g16040 retrotransposon protein, putative, unclassified, expressed SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1332-S.SNP.9:9798591 chr09:009798591 0 W/9798591-9798591 FN1332-S Single Base Substitution C-T INTRON HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN_776-5-1.SNP.9:9801934 chr09:009801934 0 W/9801934-9801934 FN_776-5-1 Single Base Substitution G-A Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN1436-S.SNP.9:9805028 chr09:009805028 0 W/9805028-9805028 FN1436-S Single Base Substitution G-C INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2551-S.SNP.9:9808742 chr09:009808742 0 W/9808742-9808742 FN2551-S SNP T -> G AC=2;AN=198;BQB=0.734815;DP=4260;DP4=2139,1780,33,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.45584e-32;MQSB=0.959833;RPB=0.853655;SGB=122.769;VDB=0.279773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aCc|N111T|267|LOC_Os09g16060|protein_coding|CODING|LOC_Os09g16060.1|1|1) FN3494-S.SNP.9:9818549 chr09:009818549 0 W/9818549-9818549 FN3494-S SNP T -> A AC=2;AN=184;BQB=0.963229;DP=2664;DP4=1195,1362,16,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.00283e-19;MQSB=0.952094;RPB=0.705833;SGB=123.793;VDB=0.158861;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.9:9827112 chr09:009827112 0 W/9827112-9827112 FN4247-S SNP T -> C AC=2;AN=170;BQB=0.939037;DP=2657;DP4=1168,1367,13,13;HOB=0.0232526;ICB=0.494188;MQ=33;MQ0F=0.084682;MQB=0.95464;MQSB=0;RPB=0.73225;SGB=49.1957;VDB=0.760385;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.9:9827565 chr09:009827565 0 W/9827565-9827565 FN4275-S SNP C -> A AC=1;AN=170;BQB=0.99442;DP=2715;DP4=1344,1304,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0405157;MQB=0.000295567;MQSB=0.00253984;RPB=0.322777;SGB=65.6427;VDB=0.518066;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G84|1370|LOC_Os09g16100|protein_coding|CODING|LOC_Os09g16100.1|1|1) FN4275-S.SNP.9:9827568 chr09:009827568 0 W/9827568-9827568 FN4275-S SNP C -> A AC=1;AN=170;BQB=0.861692;DP=2718;DP4=1366,1292,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0474614;MQB=0.00070445;MQSB=0.00407389;RPB=0.181634;SGB=65.6427;VDB=0.518066;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V85|1370|LOC_Os09g16100|protein_coding|CODING|LOC_Os09g16100.1|1|1) FN757-S.SNP.9:9828481 chr09:009828481 0 W/9828481-9828481 FN757-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g16100 retrotransposon protein, putative, unclassified, expressed SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3941-S.SNP.9:9830849 chr09:009830849 0 W/9830849-9830849 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.7002;DP=2993;DP4=1322,1545,3,14;HOB=0.0235261;ICB=0.494119;MQ=26;MQ0F=0.154694;MQB=0.840925;MQSB=2.6385e-10;RPB=0.991012;SGB=48.4712;VDB=0.314006;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1114|1370|LOC_Os09g16100|protein_coding|CODING|LOC_Os09g16100.1|3|1) FN1707-S.SNP.9:9838272 chr09:009838272 0 W/9838272-9838272 FN1707-S SNP T -> A AC=1;AN=188;BQB=0.0619383;DP=2736;DP4=920,1786,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000178072;MQSB=0.916756;RPB=0.991084;SGB=-14.9998;VDB=0.944591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.9:9838899 chr09:009838899 0 W/9838899-9838899 FN2471 SNP A -> C AC=1;AN=200;BQB=0.774026;DP=4669;DP4=2431,2055,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.64907e-17;MQSB=0.975932;RPB=0.930594;SGB=90.7419;VDB=0.101454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3885-S.SNP.9:9842720 chr09:009842720 0 W/9842720-9842720 FN3885-S SNP T -> C AC=2;AN=158;BQB=0.510973;DP=2830;DP4=1307,1391,13,24;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.000353357;MQB=1.18766e-14;MQSB=0.123823;RPB=0.857738;SGB=32.214;VDB=0.168832;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.9:9846215 chr09:009846215 0 W/9846215-9846215 FN1384-S Single Base Substitution G-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3630-S.SNP.9:9849821 chr09:009849821 0 W/9849821-9849821 FN3630-S SNP G -> A AC=1;AN=190;BQB=0.925877;DP=2465;DP4=1293,1085,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.52737e-05;MQSB=0.810807;RPB=0.994184;SGB=26.3271;VDB=0.439213;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G78S|170|LOC_Os09g16150|protein_coding|CODING|LOC_Os09g16150.1|2|1) FN2454.SNP.9:9862485 chr09:009862485 0 W/9862485-9862485 FN2454 SNP A -> C AC=1;AN=200;BQB=0.654463;DP=4714;DP4=2548,1838,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.90142e-06;MQSB=0.50576;RPB=0.334523;SGB=29.4541;VDB=0.109757;EFF=INTRON(MODIFIER||||266|LOC_Os09g16170|protein_coding|CODING|LOC_Os09g16170.1|1|1) FN3547-S.SNP.9:9869150 chr09:009869150 0 W/9869150-9869150 FN3547-S SNP C -> A AC=1;AN=188;BQB=0.778477;DP=2876;DP4=1242,1524,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08856e-10;MQSB=0.437818;RPB=0.899699;SGB=80.782;VDB=0.847446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1424-S.SNP.9:9872912 chr09:009872912 0 W/9872912-9872912 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN725-S.SNP.9:9882035 chr09:009882035 0 W/9882035-9882035 FN725-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g16200 expressed protein SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2482.SNP.9:9884468 chr09:009884468 0 W/9884468-9884468 FN2482 SNP A -> C AC=1;AN=200;BQB=0.844157;DP=4772;DP4=2391,2094,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.5979e-14;MQSB=0.833999;RPB=0.535756;SGB=72.7161;VDB=0.247063;EFF=INTRON(MODIFIER||||724|LOC_Os09g16200|protein_coding|CODING|LOC_Os09g16200.1|3|1) FN2488.SNP.9:9884966 chr09:009884966 0 W/9884966-9884966 FN2488 SNP A -> T AC=1;AN=200;BQB=0.322625;DP=5068;DP4=2536,2248,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03037e-11;MQSB=0.970868;RPB=0.855556;SGB=22.3313;VDB=0.80626;EFF=INTRON(MODIFIER||||724|LOC_Os09g16200|protein_coding|CODING|LOC_Os09g16200.1|3|1) FN2684-S.SNP.9:9890628 chr09:009890628 0 W/9890628-9890628 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.914569;DP=4713;DP4=2302,2205,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0375e-12;MQSB=0.0428661;RPB=0.447931;SGB=17.5158;VDB=0.131618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1046-S.SNP.9:9890749 chr09:009890749 0 W/9890749-9890749 FN1046-S Single Base Substitution G-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN-279.SNP.9:9898663 chr09:009898663 0 W/9898663-9898663 FN-279 Single Base Substitution C-T INTERGENIC HOMO SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-359.SNP.9:9907960 chr09:009907960 0 W/9907960-9907960 FN-359 Single Base Substitution C-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1158-S.SNP.9:9914107 chr09:009914107 0 W/9914107-9914107 FN1158-S Single Base Substitution G-A INTRON HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN936-S.SNP.9:9918032 chr09:009918032 0 W/9918032-9918032 FN936-S Single Base Substitution G-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN3902-S.SNP.9:9928089 chr09:009928089 0 W/9928089-9928089 FN3902-S SNP G -> A AC=2;AN=158;BQB=0.850416;DP=2722;DP4=1249,1352,16,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.87562e-16;MQSB=0.91427;RPB=0.178458;SGB=87.9846;VDB=0.827171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.9:9932582 chr09:009932582 0 W/9932582-9932582 FN2437 SNP G -> A AC=2;AN=200;BQB=0.949489;DP=5326;DP4=2394,2580,32,32;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00375516;MQB=1.68999e-26;MQSB=1.8273e-09;RPB=0.257712;SGB=83.3278;VDB=0.0519146;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.9:9936314 chr09:009936314 0 W/9936314-9936314 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.747498;DP=1892;DP4=971,725,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=8.65182e-06;MQSB=0.887479;RPB=0.646786;SGB=38.987;VDB=0.0369482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.9:9936428 chr09:009936428 0 W/9936428-9936428 FN3629-S SNP G -> A AC=1;AN=190;BQB=0.910927;DP=1368;DP4=784,509,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00405805;MQSB=2.82108e-07;RPB=0.998514;SGB=21.7749;VDB=0.835615;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.9:9944491 chr09:009944491 0 W/9944491-9944491 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.865732;DP=3040;DP4=1682,1265,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00067e-05;MQSB=0.995462;RPB=0.243971;SGB=49.0954;VDB=0.155627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.9:9944840 chr09:009944840 0 W/9944840-9944840 FN2184-S SNP C -> A AC=1;AN=190;BQB=0.943595;DP=4981;DP4=2259,2449,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200763;MQB=2.33307e-06;MQSB=0.183776;RPB=0.899839;SGB=15.9981;VDB=0.872842;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.9:9948756 chr09:009948756 0 W/9948756-9948756 FN857-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g16290 ABC-2 type transporter, putative, expressed SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN-100.SNP.9:9950753 chr09:009950753 0 W/9950753-9950753 FN-100 Single Base Substitution G-A INTRON HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN-100.SNP.9:9950754 chr09:009950754 0 W/9950754-9950754 FN-100 Single Base Substitution G-A INTRON HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN4082-S.SNP.9:9951670 chr09:009951670 0 W/9951670-9951670 FN4082-S SNP C -> A AC=1;AN=182;BQB=0.5986;DP=2627;DP4=1200,1372,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.4675e-10;MQSB=0.95773;RPB=0.705477;SGB=75.6874;VDB=0.441666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M77I|1352|LOC_Os09g16290|protein_coding|CODING|LOC_Os09g16290.1|3|1) FN1335-S.SNP.9:9954829 chr09:009954829 0 W/9954829-9954829 FN1335-S Single Base Substitution T-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN4175-S.SNP.9:9965129 chr09:009965129 0 W/9965129-9965129 FN4175-S SNP G -> A AC=1;AN=170;BQB=0.9998;DP=2101;DP4=1268,710,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000436984;MQSB=0.883605;RPB=0.997421;SGB=43.4296;VDB=0.534701;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.9:9972600 chr09:009972600 0 W/9972600-9972600 FN3698-S SNP C -> T AC=2;AN=190;BQB=0.966407;DP=3027;DP4=1346,1574,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2632e-14;MQSB=0.97318;RPB=0.41892;SGB=85.8548;VDB=0.292056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V80I|423|LOC_Os09g16330|protein_coding|CODING|LOC_Os09g16330.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1103I|1446|LOC_Os09g16330|protein_coding|CODING|LOC_Os09g16330.2|20|1) FN4201-S.SNP.9:9975772 chr09:009975772 0 W/9975772-9975772 FN4201-S SNP A -> T AC=1;AN=170;BQB=0.987429;DP=2512;DP4=1159,1286,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.87038e-06;MQSB=0.991471;RPB=0.877332;SGB=34.5445;VDB=0.622626;EFF=INTRON(MODIFIER||||1446|LOC_Os09g16330|protein_coding|CODING|LOC_Os09g16330.2|9|1) FN3432-S.SNP.9:9990836 chr09:009990836 0 W/9990836-9990836 FN3432-S SNP T -> C AC=1;AN=184;BQB=0.993902;DP=3554;DP4=2149,1304,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0391109;MQB=0.0214934;MQSB=0.0029875;RPB=0.803789;SGB=-15.7576;VDB=0.431731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.9:9990840 chr09:009990840 0 W/9990840-9990840 FN3716-S SNP C -> A AC=1;AN=190;BQB=0.764801;DP=3114;DP4=1625,1372,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0497752;MQB=0.287058;MQSB=9.43736e-05;RPB=0.560869;SGB=44.5415;VDB=0.0954368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.9:9998858 chr09:009998858 0 W/9998858-9998858 FN3375-S SNP G -> A AC=1;AN=184;BQB=1;DP=4603;DP4=2109,2350,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.139692;MQB=0.0107268;MQSB=0;RPB=0.0892326;SGB=48.7425;VDB=0.538108;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.9:9998961 chr09:009998961 0 W/9998961-9998961 FN3592-S SNP C -> T AC=1;AN=188;BQB=0.967382;DP=5633;DP4=2191,3346,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.208415;MQB=0.176669;MQSB=0;RPB=0.998728;SGB=50.1574;VDB=0.336392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.9:9999473 chr09:009999473 0 W/9999473-9999473 FN1173-S Single Base Substitution T-A INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1075-S.SNP.9:10010598 chr09:010010598 0 W/10010598-10010598 FN1075-S Single Base Substitution A-G INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN1327-S.SNP.9:10013582 chr09:010013582 0 W/10013582-10013582 FN1327-S Single Base Substitution A-G INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3901-S.SNP.9:10014559 chr09:010014559 0 W/10014559-10014559 FN3901-S SNP G -> T AC=1;AN=158;BQB=0.64792;DP=2362;DP4=1180,1007,9,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.40714e-05;MQSB=0.992004;RPB=0.548557;SGB=16.7104;VDB=0.571213;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtA|V600|1386|LOC_Os09g16380|protein_coding|CODING|LOC_Os09g16380.1|10|1) FN2184-S.SNP.9:10015594 chr09:010015594 0 W/10015594-10015594 FN2184-S SNP G -> A AC=1;AN=190;BQB=0.94433;DP=5034;DP4=2236,2423,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50035e-06;MQSB=0.705029;RPB=0.870008;SGB=58.2031;VDB=0.171659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L325F|1386|LOC_Os09g16380|protein_coding|CODING|LOC_Os09g16380.1|8|1) FN1403-S.SNP.9:10016690 chr09:010016690 0 W/10016690-10016690 FN1403-S Single Base Substitution T-A STOP_GAINED HOMO LOC_Os09g16380 pleiotropic drug resistance protein, putative, expressed SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1403-S.SNP.9:10016693 chr09:010016693 0 W/10016693-10016693 FN1403-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g16380 pleiotropic drug resistance protein, putative, expressed SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN3481-S.SNP.9:10017151 chr09:010017151 0 W/10017151-10017151 FN3481-S SNP C -> T AC=1;AN=184;BQB=0.887044;DP=2394;DP4=1143,1156,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.85526e-05;MQSB=0.97373;RPB=0.9734;SGB=39.699;VDB=0.627244;EFF=INTRON(MODIFIER||||1386|LOC_Os09g16380|protein_coding|CODING|LOC_Os09g16380.1|2|1) FN3946-S.SNP.9:10018112 chr09:010018112 0 W/10018112-10018112 FN3946-S SNP C -> G AC=1;AN=168;BQB=0.947898;DP=2668;DP4=1250,1317,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.24457e-11;MQSB=0.640286;RPB=0.863364;SGB=69.8961;VDB=0.69939;EFF=INTRON(MODIFIER||||1386|LOC_Os09g16380|protein_coding|CODING|LOC_Os09g16380.1|1|1) FN1327-S.SNP.9:10019867 chr09:010019867 0 W/10019867-10019867 FN1327-S Single Base Substitution C-T INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN2553-S.SNP.9:10027065 chr09:010027065 0 W/10027065-10027065 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.929913;DP=2681;DP4=542,1837,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00074599;MQB=0.000832245;MQSB=7.00649e-45;RPB=0.99999;SGB=29.3637;VDB=0.943222;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.9:10029977 chr09:010029977 0 W/10029977-10029977 FN4037-S SNP A -> T AC=1;AN=168;BQB=0.749305;DP=2432;DP4=1081,1220,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.12561e-12;MQSB=0.961383;RPB=0.919314;SGB=46.4929;VDB=0.0652485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N112Y|335|LOC_Os09g16400|protein_coding|CODING|LOC_Os09g16400.1|3|1) FN2091-S.SNP.9:10031258 chr09:010031258 0 W/10031258-10031258 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.727106;DP=2909;DP4=1232,1633,3,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.06636e-09;MQSB=0.934824;RPB=0.98184;SGB=56.6036;VDB=0.547379;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W298*|335|LOC_Os09g16400|protein_coding|CODING|LOC_Os09g16400.1|5|1) FN3774-S.SNP.9:10036706 chr09:010036706 0 W/10036706-10036706 FN3774-S SNP T -> G AC=1;AN=190;BQB=0.796872;DP=2597;DP4=1170,1323,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02483e-06;MQSB=0.738045;RPB=0.400625;SGB=36.1006;VDB=0.382138;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.9:10038025 chr09:010038025 0 W/10038025-10038025 FN824-S Single Base Substitution A-G INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3665-S.SNP.9:10042623 chr09:010042623 0 W/10042623-10042623 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.758538;DP=1794;DP4=891,819,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.63182e-07;MQSB=0.0914294;RPB=0.657645;SGB=43.2083;VDB=0.46574;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E160|196|LOC_Os09g16420|protein_coding|CODING|LOC_Os09g16420.1|1|1) FN2252-S.SNP.9:10044857 chr09:010044857 0 W/10044857-10044857 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.408874;DP=4899;DP4=2153,2401,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000816493;MQB=1.76741e-10;MQSB=0.933543;RPB=0.529253;SGB=53.8699;VDB=0.309416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R770H|1261|LOC_Os09g16430|protein_coding|CODING|LOC_Os09g16430.1|8|1) FN3415-S.SNP.9:10045165 chr09:010045165 0 W/10045165-10045165 FN3415-S SNP T -> G AC=2;AN=184;BQB=0.95872;DP=2878;DP4=1354,1402,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.88306e-14;MQSB=0.97522;RPB=0.581378;SGB=107.526;VDB=0.147233;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcC|S691|1261|LOC_Os09g16430|protein_coding|CODING|LOC_Os09g16430.1|7|1) FN-273.SNP.9:10046206 chr09:010046206 0 W/10046206-10046206 FN-273 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g16430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN1465-S.SNP.9:10049063 chr09:010049063 0 W/10049063-10049063 FN1465-S Single Base Substitution G-C INTRON HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN-132.SNP.9:10049756 chr09:010049756 0 W/10049756-10049756 FN-132 Single Base Substitution G-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN813-S.SNP.9:10050665 chr09:010050665 0 W/10050665-10050665 FN813-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN456-S.SNP.9:10051383 chr09:010051383 0 W/10051383-10051383 FN456-S Single Base Substitution T-C INTRON HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN_N1-150-1.SNP.9:10051687 chr09:010051687 0 W/10051687-10051687 FN_N1-150-1 Single Base Substitution G-T Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1419-S.SNP.9:10060553 chr09:010060553 0 W/10060553-10060553 FN1419-S Single Base Substitution G-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN872-S.SNP.9:10063892 chr09:010063892 0 W/10063892-10063892 FN872-S Single Base Substitution T-C INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-218.SNP.9:10066417 chr09:010066417 0 W/10066417-10066417 FN-218 Single Base Substitution G-C INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2353.SNP.9:10068505 chr09:010068505 0 W/10068505-10068505 FN2353 SNP A -> G AC=1;AN=192;BQB=0.158242;DP=5241;DP4=2589,2290,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09995e-14;MQSB=0.900849;RPB=0.92123;SGB=-41.8626;VDB=0.309402;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C252|478|LOC_Os09g16449|protein_coding|CODING|LOC_Os09g16449.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C252|304|LOC_Os09g16449|protein_coding|CODING|LOC_Os09g16449.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C252|304|LOC_Os09g16449|protein_coding|CODING|LOC_Os09g16449.3|4|1) FN424-S.SNP.9:10069936 chr09:010069936 0 W/10069936-10069936 FN424-S Single Base Substitution C-G INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2575-S.SNP.9:10074488 chr09:010074488 0 W/10074488-10074488 FN2575-S SNP C -> T AC=2;AN=198;BQB=0.896633;DP=3959;DP4=1705,1882,39,40;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000252589;MQB=3.11804e-40;MQSB=0.807778;RPB=0.0220595;SGB=307.749;VDB=0.545326;EFF=INTRON(MODIFIER||||422|LOC_Os09g16458|protein_coding|CODING|LOC_Os09g16458.1|1|1) FN1409-S.SNP.9:10076755 chr09:010076755 0 W/10076755-10076755 FN1409-S Single Base Substitution G-A INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1561-S.SNP.9:10077839 chr09:010077839 0 W/10077839-10077839 FN1561-S Single Base Substitution C-A INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN2276-S.SNP.9:10079319 chr09:010079319 0 W/10079319-10079319 FN2276-S SNP C -> T AC=2;AN=190;BQB=0.329985;DP=3219;DP4=1396,1517,15,28;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.15425e-17;MQSB=0.550354;RPB=0.522848;SGB=142.717;VDB=0.0910305;EFF=INTRON(MODIFIER||||422|LOC_Os09g16458|protein_coding|CODING|LOC_Os09g16458.1|1|1) FN4160-S.SNP.9:10082190 chr09:010082190 0 W/10082190-10082190 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.991731;DP=2255;DP4=1248,884,12,10;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.0146341;MQB=3.56545e-06;MQSB=1.54363e-11;RPB=0.97527;SGB=65.8619;VDB=0.0331236;EFF=INTRON(MODIFIER||||422|LOC_Os09g16458|protein_coding|CODING|LOC_Os09g16458.1|1|1) FN416-S.SNP.9:10082931 chr09:010082931 0 W/10082931-10082931 FN416-S Single Base Substitution G-A INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2191-S.SNP.9:10084322 chr09:010084322 0 W/10084322-10084322 FN2191-S SNP G -> C AC=1;AN=190;BQB=0.163287;DP=4926;DP4=2504,2044,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70251e-07;MQSB=0.999905;RPB=0.256106;SGB=10.3266;VDB=0.349643;EFF=INTRON(MODIFIER||||422|LOC_Os09g16458|protein_coding|CODING|LOC_Os09g16458.1|1|1) FN2677-S.SNP.9:10089691 chr09:010089691 0 W/10089691-10089691 FN2677-S SNP A -> G AC=1;AN=200;BQB=0.895777;DP=4627;DP4=2334,2064,10,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.19626e-16;MQSB=0.854886;RPB=0.470778;SGB=118.737;VDB=0.421809;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.9:10094023 chr09:010094023 0 W/10094023-10094023 FN735-S Single Base Substitution T-C INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2781-S.SNP.9:10094933 chr09:010094933 0 W/10094933-10094933 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.824805;DP=4168;DP4=2042,1734,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.9e-09;MQSB=0.946459;RPB=0.619083;SGB=-100.25;VDB=0.656627;EFF=INTERGENIC(MODIFIER||||||||||1) FN936-S.SNP.9:10096981 chr09:010096981 0 W/10096981-10096981 FN936-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g16480 retrotransposon, putative, centromere-specific SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2670-S.SNP.9:10101622 chr09:010101622 0 W/10101622-10101622 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.90571;DP=5274;DP4=2573,2419,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.38404e-20;MQSB=0.999699;RPB=0.0654547;SGB=141.763;VDB=0.0163599;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.9:10104510 chr09:010104510 0 W/10104510-10104510 W464-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN923-S.SNP.9:10109409 chr09:010109409 0 W/10109409-10109409 FN923-S Single Base Substitution G-A INTERGENIC HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2493.SNP.9:10113735 chr09:010113735 0 W/10113735-10113735 FN2493 SNP T -> G AC=1;AN=200;BQB=0.0886364;DP=5223;DP4=2503,2450,12,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.60717e-06;MQSB=0.563467;RPB=0.958228;SGB=54.6902;VDB=0.934986;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.9:10118791 chr09:010118791 0 W/10118791-10118791 FN4016-S SNP A -> T AC=1;AN=168;BQB=0.829612;DP=2769;DP4=1436,1201,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.26988e-09;MQSB=0.936223;RPB=0.789625;SGB=61.0344;VDB=0.347638;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.9:10118804 chr09:010118804 0 W/10118804-10118804 FN1299-S Single Base Substitution T-C INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2549-S.SNP.9:10121837 chr09:010121837 0 W/10121837-10121837 FN2549-S SNP C -> T AC=1;AN=198;BQB=0.173877;DP=4060;DP4=2072,1752,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00337614;MQSB=0.016006;RPB=0.552166;SGB=-3.4115;VDB=0.620674;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.9:10129731 chr09:010129731 0 W/10129731-10129731 FN4038-S SNP A -> T AC=1;AN=168;BQB=0.996281;DP=2394;DP4=969,1336,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.81671e-07;MQSB=0.919876;RPB=0.353125;SGB=27.8864;VDB=0.314843;EFF=INTRON(MODIFIER||||361|LOC_Os09g16510|protein_coding|CODING|LOC_Os09g16510.1|2|1) FN907-S.SNP.9:10140519 chr09:010140519 0 W/10140519-10140519 FN907-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g16530 transposon protein, putative, unclassified, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-286.SNP.9:10142720 chr09:010142720 0 W/10142720-10142720 FN-286 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g16530 transposon protein, putative, unclassified, expressed SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2540-S.SNP.9:10149997 chr09:010149997 0 W/10149997-10149997 FN2540-S SNP A -> C AC=2;AN=198;BQB=0.323012;DP=4232;DP4=1875,2128,16,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.16008e-18;MQSB=0.848237;RPB=0.993115;SGB=112.051;VDB=0.987119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.9:10150671 chr09:010150671 0 W/10150671-10150671 FN2124-S SNP T -> A AC=1;AN=168;BQB=0.103117;DP=4083;DP4=2199,1804,21,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17276e-12;MQSB=0.919363;RPB=0.836055;SGB=-8.04863;VDB=0.387999;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.9:10154282 chr09:010154282 0 W/10154282-10154282 FN-106 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g16540 protein kinase, putative, expressed SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1336-S.SNP.9:10155002 chr09:010155002 0 W/10155002-10155002 FN1336-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g16540 protein kinase, putative, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3740-S.SNP.9:10157755 chr09:010157755 0 W/10157755-10157755 FN3740-S SNP G -> C AC=2;AN=190;BQB=0.997711;DP=2871;DP4=1395,1341,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.06046e-17;MQSB=0.804081;RPB=0.539928;SGB=126.511;VDB=0.946363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.9:10161684 chr09:010161684 0 W/10161684-10161684 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.729884;DP=4598;DP4=2248,2214,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83188e-09;MQSB=0.842124;RPB=0.708843;SGB=58.8698;VDB=0.102598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.9:10163304 chr09:010163304 0 W/10163304-10163304 FN1247-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g16560 hypothetical protein SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN713-S.SNP.9:10164374 chr09:010164374 0 W/10164374-10164374 FN713-S Single Base Substitution T-G INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2588-S.SNP.9:10168024 chr09:010168024 0 W/10168024-10168024 FN2588-S SNP T -> C AC=2;AN=198;BQB=0.896288;DP=3903;DP4=1847,1795,25,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.1051e-23;MQSB=0.863868;RPB=0.411947;SGB=112.388;VDB=0.590819;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.9:10170152 chr09:010170152 0 W/10170152-10170152 FN588-S Single Base Substitution T-G INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2474.SNP.9:10172363 chr09:010172363 0 W/10172363-10172363 FN2474 SNP T -> C AC=1;AN=200;BQB=0.431571;DP=4079;DP4=1947,1798,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27872e-06;MQSB=0.904239;RPB=0.831188;SGB=25.849;VDB=0.0398323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.9:10175955 chr09:010175955 0 W/10175955-10175955 FN3558-S SNP A -> T AC=2;AN=188;BQB=0.938029;DP=3659;DP4=1787,1652,19,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.45087e-20;MQSB=0.0353346;RPB=0.198342;SGB=84.5719;VDB=0.527779;EFF=INTRON(MODIFIER||||279|LOC_Os09g16580|protein_coding|CODING|LOC_Os09g16580.1|1|1) FN3581-S.SNP.9:10176363 chr09:010176363 0 W/10176363-10176363 FN3581-S SNP T -> A AC=1;AN=190;BQB=0.881455;DP=2808;DP4=1326,1383,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08865e-06;MQSB=0.675081;RPB=0.272983;SGB=62.7569;VDB=0.827271;EFF=INTRON(MODIFIER||||279|LOC_Os09g16580|protein_coding|CODING|LOC_Os09g16580.1|1|1) FN895-S.SNP.9:10177519 chr09:010177519 0 W/10177519-10177519 FN895-S Single Base Substitution C-T INTRON HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1708-S.SNP.9:10178731 chr09:010178731 0 W/10178731-10178731 FN1708-S SNP C -> T AC=1;AN=188;BQB=0.0275827;DP=2930;DP4=984,1923,3,12;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0682594;MQB=0.857739;MQSB=1.79092e-17;RPB=0.957932;SGB=43.0708;VDB=0.583238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.9:10184006 chr09:010184006 0 W/10184006-10184006 FN3851-S SNP C -> G AC=1;AN=158;BQB=0.840565;DP=2016;DP4=1144,757,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.0403e-05;MQSB=0.443512;RPB=0.996196;SGB=3.4556;VDB=0.995153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.9:10189003 chr09:010189003 0 W/10189003-10189003 FN3716-S SNP T -> A AC=1;AN=190;BQB=0.417373;DP=2971;DP4=1440,1377,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.74948e-05;MQSB=0.987531;RPB=0.671345;SGB=39.6545;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1170-S.SNP.9:10190082 chr09:010190082 0 W/10190082-10190082 FN1170-S Single Base Substitution T-G INTRON HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3110-S.SNP.9:10190723 chr09:010190723 0 W/10190723-10190723 FN3110-S SNP C -> T AC=1;AN=184;BQB=0.926017;DP=3203;DP4=1584,1516,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16122e-09;MQSB=0.999242;RPB=0.653324;SGB=57.786;VDB=0.604518;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W69*|301|LOC_Os09g16600|protein_coding|CODING|LOC_Os09g16600.1|1|1);LOF=(LOC_Os09g16600|LOC_Os09g16600|1|1.00);NMD=(LOC_Os09g16600|LOC_Os09g16600|1|1.00) FN3779-S.SNP.9:10194420 chr09:010194420 0 W/10194420-10194420 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.899302;DP=1850;DP4=795,976,6,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.14554e-09;MQSB=0.0362102;RPB=0.812419;SGB=57.4238;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.9:10201850 chr09:010201850 0 W/10201850-10201850 FN3280-S SNP C -> A AC=1;AN=184;BQB=0.985444;DP=2147;DP4=971,1067,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.232417;MQB=0.912568;MQSB=0;RPB=0.910541;SGB=18.2315;VDB=0.895408;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.9:10203026 chr09:010203026 0 W/10203026-10203026 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.921416;DP=3333;DP4=1893,1316,19,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.35224e-17;MQSB=0.978119;RPB=0.734308;SGB=102.334;VDB=0.972996;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.9:10204571 chr09:010204571 0 W/10204571-10204571 FN-350 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g16650 legume lectins beta domain containing protein, putative, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2698-S.SNP.9:10214908 chr09:010214908 0 W/10214908-10214908 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.841188;DP=5184;DP4=2553,2346,7,5;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.00694444;MQB=0.183494;MQSB=0;RPB=0.298354;SGB=49.6594;VDB=0.149276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.9:10227219 chr09:010227219 0 W/10227219-10227219 FN2373 SNP A -> G AC=1;AN=192;BQB=0.182057;DP=4839;DP4=2225,2122,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.33872e-12;MQSB=0.000468953;RPB=0.783517;SGB=90.2896;VDB=0.170869;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.9:10228598 chr09:010228598 0 W/10228598-10228598 FN3384-S SNP T -> C AC=1;AN=184;BQB=0.63597;DP=2954;DP4=1406,1475,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53789e-05;MQSB=0.983447;RPB=0.570433;SGB=25.1826;VDB=0.410978;EFF=UTR_3_PRIME(MODIFIER||333||58|LOC_Os09g16714|protein_coding|CODING|LOC_Os09g16714.1|1|1) FN1109-S.SNP.9:10230348 chr09:010230348 0 W/10230348-10230348 FN1109-S Single Base Substitution T-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3494-S.SNP.9:10235911 chr09:010235911 0 W/10235911-10235911 FN3494-S SNP A -> G AC=2;AN=184;BQB=0.316366;DP=2250;DP4=1173,984,16,10;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.76766e-05;MQSB=5.30541e-11;RPB=0.992444;SGB=81.5311;VDB=0.692409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.9:10245726 chr09:010245726 0 W/10245726-10245726 FN2781-S SNP A -> T AC=1;AN=198;BQB=0.928975;DP=3422;DP4=1410,1840,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0;MQB=0.000259174;MQSB=0.318287;RPB=0.998475;SGB=44.9151;VDB=0.794671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.9:10258671 chr09:010258671 0 W/10258671-10258671 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.937117;DP=4927;DP4=2454,2118,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=1.85724e-05;MQSB=0.547289;RPB=0.588838;SGB=23.6597;VDB=0.155031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.9:10259094 chr09:010259094 0 W/10259094-10259094 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.920504;DP=4838;DP4=2239,2354,15,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00454733;MQB=1.57063e-07;MQSB=0.00195668;RPB=0.663687;SGB=-38.0794;VDB=0.197286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.9:10259613 chr09:010259613 0 W/10259613-10259613 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.691267;DP=4729;DP4=2133,2383,8,7;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0128991;MQB=0.133099;MQSB=0.0578883;RPB=0.881009;SGB=43.8747;VDB=0.161376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.9:10274463 chr09:010274463 0 W/10274463-10274463 FN1336-S Single Base Substitution T-C INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN-330.SNP.9:10276434 chr09:010276434 0 W/10276434-10276434 FN-330 Single Base Substitution C-A INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. W279-4-1.SNP.9:10277570 chr09:010277570 0 W/10277570-10277570 W279-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3547-S.SNP.9:10302251 chr09:010302251 0 W/10302251-10302251 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.180919;DP=2961;DP4=1491,1392,13,3;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0388382;MQB=0.839645;MQSB=0.78215;RPB=0.985229;SGB=67.1521;VDB=0.977369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1684V|1857|LOC_Os09g16860|protein_coding|CODING|LOC_Os09g16860.1|10|1) FN2348.SNP.9:10307961 chr09:010307961 0 W/10307961-10307961 FN2348 SNP G -> T AC=1;AN=192;BQB=0.991159;DP=5099;DP4=2686,2116,11,22;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0;MQB=5.86613e-11;MQSB=0.0674424;RPB=0.12662;SGB=32.3844;VDB=0.164699;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.9:10310407 chr09:010310407 0 W/10310407-10310407 FN4167-S SNP G -> A AC=1;AN=170;BQB=0.988117;DP=2647;DP4=1205,1356,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0562901;MQB=0.95569;MQSB=8.56502e-28;RPB=0.136709;SGB=14.9986;VDB=0.363551;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.9:10310495 chr09:010310495 0 W/10310495-10310495 FN813-S Single Base Substitution C-T INTERGENIC HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1443-S.SNP.9:10313405 chr09:010313405 0 W/10313405-10313405 FN1443-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3817-S.SNP.9:10313405 chr09:010313405 0 W/10313405-10313405 FN3817-S SNP C -> A AC=2;AN=190;BQB=0.912336;DP=2703;DP4=1479,1126,18,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.95616e-17;MQSB=0.505297;RPB=0.291523;SGB=89.4087;VDB=0.540826;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R530|754|LOC_Os09g16880|protein_coding|CODING|LOC_Os09g16880.1|4|1) FN4126-S.SNP.9:10313405 chr09:010313405 0 W/10313405-10313405 FN4126-S SNP C -> A AC=1;AN=182;BQB=0.729019;DP=2984;DP4=1629,1288,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.38187e-06;MQSB=0.660681;RPB=0.81687;SGB=13.1007;VDB=0.611614;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R530|754|LOC_Os09g16880|protein_coding|CODING|LOC_Os09g16880.1|4|1) FN-61.SNP.9:10316842 chr09:010316842 0 W/10316842-10316842 FN-61 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g16890 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2386.SNP.9:10319898 chr09:010319898 0 W/10319898-10319898 FN2386 SNP C -> A AC=1;AN=192;BQB=0.0744381;DP=3959;DP4=1680,1903,13,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.00102005;MQSB=1.19911e-10;RPB=0.593351;SGB=76.5965;VDB=0.713528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.9:10322731 chr09:010322731 0 W/10322731-10322731 FN2457 SNP G -> A AC=1;AN=200;BQB=0.935591;DP=3912;DP4=1807,1848,12,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=3.09009e-06;MQSB=0.01123;RPB=0.813071;SGB=45.1159;VDB=0.568338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.9:10329429 chr09:010329429 0 W/10329429-10329429 FN3673-S SNP C -> A AC=2;AN=190;BQB=0.987225;DP=2529;DP4=1731,703,26,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.5893e-19;MQSB=0.97955;RPB=0.811311;SGB=114.286;VDB=0.458753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F172L|458|LOC_Os09g16910|protein_coding|CODING|LOC_Os09g16910.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F172L|458|LOC_Os09g16910|protein_coding|CODING|LOC_Os09g16910.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F172L|458|LOC_Os09g16910|protein_coding|CODING|LOC_Os09g16910.2|1|1) FN4190-S.SNP.9:10343721 chr09:010343721 0 W/10343721-10343721 FN4190-S SNP G -> A AC=1;AN=170;BQB=0.923037;DP=2278;DP4=1007,1194,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000294842;MQSB=0.0217703;RPB=0.459914;SGB=25.6601;VDB=0.823644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.9:10362262 chr09:010362262 0 W/10362262-10362262 FN3673-S SNP T -> A AC=2;AN=190;BQB=0.969285;DP=1800;DP4=883,848,7,5;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=0.0275638;MQSB=0.0994616;RPB=0.680327;SGB=49.0954;VDB=0.0729901;EFF=INTERGENIC(MODIFIER||||||||||1) FN1395-S.SNP.9:10366648 chr09:010366648 0 W/10366648-10366648 FN1395-S Single Base Substitution T-C INTRON HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN806-S.SNP.9:10368753 chr09:010368753 0 W/10368753-10368753 FN806-S Single Base Substitution G-A INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3394-S.SNP.9:10373772 chr09:010373772 0 W/10373772-10373772 FN3394-S SNP A -> T AC=2;AN=184;BQB=0.531894;DP=2418;DP4=1105,1174,9,7;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0;MQB=0.227766;MQSB=5.49591e-05;RPB=0.0330557;SGB=46.3132;VDB=2.13435e-06;EFF=INTRON(MODIFIER||||126|LOC_Os09g16970|protein_coding|CODING|LOC_Os09g16970.1|1|1) FN3394-S.SNP.9:10373773 chr09:010373773 0 W/10373773-10373773 FN3394-S SNP C -> T AC=2;AN=184;BQB=0.843519;DP=2399;DP4=1121,1198,7,7;HOB=0.0215028;ICB=0.494625;MQ=34;MQ0F=0;MQB=0.221666;MQSB=9.8046e-05;RPB=0.062906;SGB=57.786;VDB=0.000132291;EFF=INTRON(MODIFIER||||126|LOC_Os09g16970|protein_coding|CODING|LOC_Os09g16970.1|1|1) FN2194-S.SNP.9:10376720 chr09:010376720 0 W/10376720-10376720 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.0123455;DP=1841;DP4=992,647,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0;MQB=0.977119;MQSB=0.144427;RPB=0.641524;SGB=39.9877;VDB=0.133033;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.9:10380328 chr09:010380328 0 W/10380328-10380328 FN2457 SNP G -> A AC=1;AN=200;BQB=0.984322;DP=4912;DP4=2584,2089,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.8616e-16;MQSB=0.946585;RPB=0.805954;SGB=104.921;VDB=0.403908;EFF=INTRON(MODIFIER||||637|LOC_Os09g16980|protein_coding|CODING|LOC_Os09g16980.1|2|1) FN2457.SNP.9:10380329 chr09:010380329 0 W/10380329-10380329 FN2457 SNP T -> A AC=1;AN=200;BQB=0.855161;DP=4924;DP4=2531,2062,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68257e-16;MQSB=0.995299;RPB=0.720152;SGB=109.527;VDB=0.438608;EFF=INTRON(MODIFIER||||637|LOC_Os09g16980|protein_coding|CODING|LOC_Os09g16980.1|2|1) FN910-S.SNP.9:10383447 chr09:010383447 0 W/10383447-10383447 FN910-S Single Base Substitution A-G INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2330.SNP.9:10406252 chr09:010406252 0 W/10406252-10406252 FN2330 SNP C -> T AC=2;AN=192;BQB=0.841094;DP=4594;DP4=2249,2036,25,27;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=5.06782e-17;MQSB=0.62332;RPB=0.51245;SGB=118.666;VDB=0.0678236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.9:10407784 chr09:010407784 0 W/10407784-10407784 FN2289 SNP A -> G AC=1;AN=192;BQB=0.360503;DP=4719;DP4=2303,2063,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.09359e-09;MQSB=0.639637;RPB=0.965094;SGB=26.3496;VDB=0.39289;EFF=INTRON(MODIFIER||||189|LOC_Os09g17010|protein_coding|CODING|LOC_Os09g17010.1|1|1) FN2670-S.SNP.9:10425848 chr09:010425848 0 W/10425848-10425848 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.973464;DP=3715;DP4=1737,1827,8,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0;MQB=0.0707872;MQSB=0.996883;RPB=0.767515;SGB=34.6953;VDB=0.133702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.9:10428820 chr09:010428820 0 W/10428820-10428820 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.865191;DP=4718;DP4=1978,2247,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00127173;MQB=7.90403e-08;MQSB=0.928861;RPB=0.606826;SGB=50.3161;VDB=0.0823588;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.9:10447388 chr09:010447388 0 W/10447388-10447388 FN1760-S SNP G -> A AC=1;AN=188;BQB=0.705085;DP=2816;DP4=1616,1166,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.75758e-05;MQSB=0.691633;RPB=0.99385;SGB=13.3597;VDB=0.257671;EFF=INTRON(MODIFIER||||223|LOC_Os09g17040|protein_coding|CODING|LOC_Os09g17040.1|1|1) FN2130-S.SNP.9:10453542 chr09:010453542 0 W/10453542-10453542 FN2130-S SNP C -> G AC=1;AN=168;BQB=0.189274;DP=2773;DP4=1739,985,16,6;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=6.76212e-06;MQSB=0.141425;RPB=0.856186;SGB=-13.6493;VDB=0.575857;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.9:10455243 chr09:010455243 0 W/10455243-10455243 FN1492-S Single Base Substitution A-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1577-S.SNP.9:10455630 chr09:010455630 0 W/10455630-10455630 FN1577-S Single Base Substitution T-C INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3331-S.SNP.9:10455630 chr09:010455630 0 W/10455630-10455630 FN3331-S SNP T -> C AC=2;AN=184;BQB=0.812909;DP=2807;DP4=1234,1404,7,15;HOB=0.0215028;ICB=0.494625;MQ=30;MQ0F=0;MQB=0.109546;MQSB=0.999993;RPB=0.44423;SGB=40.9276;VDB=0.283773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.9:10456242 chr09:010456242 0 W/10456242-10456242 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.958619;DP=2097;DP4=1303,683,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0;MQB=0.0476857;MQSB=1.40708e-08;RPB=0.425203;SGB=29.5899;VDB=0.664072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.9:10457764 chr09:010457764 0 W/10457764-10457764 FN2686-S SNP C -> A AC=1;AN=200;BQB=0.882626;DP=4860;DP4=2452,2189,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30028e-09;MQSB=0.94748;RPB=0.998264;SGB=58.8698;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.9:10463356 chr09:010463356 0 W/10463356-10463356 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.999541;DP=3856;DP4=1756,1896,16,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000259336;MQB=2.48118e-17;MQSB=0.944354;RPB=0.89261;SGB=68.2711;VDB=0.639342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P45L|319|LOC_Os09g17080|protein_coding|CODING|LOC_Os09g17080.1|1|1) FN1327-S.SNP.9:10475684 chr09:010475684 0 W/10475684-10475684 FN1327-S Single Base Substitution A-G INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN1461-S.SNP.9:10486960 chr09:010486960 0 W/10486960-10486960 FN1461-S Single Base Substitution C-T INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1369-S.SNP.9:10489313 chr09:010489313 0 W/10489313-10489313 FN1369-S Single Base Substitution T-G INTRON Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN3948-S.SNP.9:10496306 chr09:010496306 0 W/10496306-10496306 FN3948-S SNP T -> A AC=1;AN=168;BQB=0.514473;DP=2628;DP4=1289,1179,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=1.54522e-07;MQSB=0.000195752;RPB=0.263811;SGB=83.1885;VDB=0.124831;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.9:10501082 chr09:010501082 0 W/10501082-10501082 FN453-S Single Base Substitution T-G INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN502-S.SNP.9:10501082 chr09:010501082 0 W/10501082-10501082 FN502-S Single Base Substitution T-G INTERGENIC HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2676-S.SNP.9:10501548 chr09:010501548 0 W/10501548-10501548 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.952294;DP=4683;DP4=1997,2476,3,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29723e-09;MQSB=0.748575;RPB=0.524193;SGB=68.0801;VDB=0.157295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.9:10514319 chr09:010514319 0 W/10514319-10514319 FN3845-S SNP T -> C AC=2;AN=190;BQB=0.359429;DP=2319;DP4=992,1082,10,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=4.43942e-06;MQSB=0.24258;RPB=0.148485;SGB=94.6341;VDB=0.148493;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.9:10518852 chr09:010518852 0 W/10518852-10518852 W453-3-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN957-S.SNP.9:10518865 chr09:010518865 0 W/10518865-10518865 FN957-S Single Base Substitution C-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2128-S.SNP.9:10519733 chr09:010519733 0 W/10519733-10519733 FN2128-S SNP T -> A AC=2;AN=168;BQB=0.0182606;DP=3690;DP4=1962,1677,14,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28336e-12;MQSB=0.939706;RPB=0.994692;SGB=-51.4578;VDB=0.810538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.9:10522923 chr09:010522923 0 W/10522923-10522923 FN1322-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN1650-S.SNP.9:10524645 chr09:010524645 0 W/10524645-10524645 FN1650-S Single Base Substitution G-A INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1355-S.SNP.9:10746726 chr09:010746726 0 W/10746726-10746726 FN1355-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g17570 expressed protein SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1355-S.SNP.9:10746727 chr09:010746727 0 W/10746727-10746727 FN1355-S Single Base Substitution C-T STOP_GAINED HET LOC_Os09g17570 expressed protein SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3804-S.SNP.9:10751594 chr09:010751594 0 W/10751594-10751594 FN3804-S SNP G -> T AC=1;AN=190;BQB=0.986741;DP=2374;DP4=1311,972,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.8224e-09;MQSB=0.510958;RPB=0.265239;SGB=62.7569;VDB=0.268087;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E12*|194|LOC_Os09g17580|protein_coding|CODING|LOC_Os09g17580.1|1|1) FN3804-S.SNP.9:10751595 chr09:010751595 0 W/10751595-10751595 FN3804-S SNP A -> T AC=1;AN=190;BQB=0.981075;DP=2361;DP4=1280,954,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.46676e-09;MQSB=0.848731;RPB=0.528105;SGB=23.6597;VDB=0.605461;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E12V|194|LOC_Os09g17580|protein_coding|CODING|LOC_Os09g17580.1|1|1) FN-256.SNP.9:10775985 chr09:010775985 0 W/10775985-10775985 FN-256 Single Base Substitution C-T INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1114-S.SNP.9:10778597 chr09:010778597 0 W/10778597-10778597 FN1114-S Single Base Substitution A-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN633-S.SNP.9:10782855 chr09:010782855 0 W/10782855-10782855 FN633-S Single Base Substitution A-G INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN832-S.SNP.9:10793036 chr09:010793036 0 W/10793036-10793036 FN832-S Single Base Substitution C-T INTRON HOMO SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN3542-S.SNP.9:10796996 chr09:010796996 0 W/10796996-10796996 FN3542-S SNP C -> T AC=1;AN=188;BQB=0.977452;DP=2867;DP4=1447,1327,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.4105e-06;MQSB=0.677584;RPB=0.803383;SGB=35.3493;VDB=0.460862;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.9:10798085 chr09:010798085 0 W/10798085-10798085 FN914-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-301.SNP.9:10800739 chr09:010800739 0 W/10800739-10800739 FN-301 Single Base Substitution C-T INTERGENIC HOMO SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3957-S.SNP.9:10812666 chr09:010812666 0 W/10812666-10812666 FN3957-S SNP T -> C AC=1;AN=168;BQB=0.863738;DP=2959;DP4=1480,1312,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.1492e-07;MQSB=0.540991;RPB=0.427966;SGB=5.62151;VDB=0.810509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.9:10825658 chr09:010825658 0 W/10825658-10825658 FN2309 SNP G -> A AC=1;AN=192;BQB=0.893682;DP=3824;DP4=1256,2207,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000261506;MQB=1.14745e-05;MQSB=0.0005701;RPB=0.136762;SGB=23.7852;VDB=0.457204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.9:10825886 chr09:010825886 0 W/10825886-10825886 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.431583;DP=2731;DP4=1457,984,13,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=8.20513e-07;MQSB=6.9314e-15;RPB=0.977564;SGB=91.1059;VDB=0.422114;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.9:10826601 chr09:010826601 0 W/10826601-10826601 W453-3-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN1327-S.SNP.9:10827665 chr09:010827665 0 W/10827665-10827665 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN553-S.SNP.9:10832655 chr09:010832655 0 W/10832655-10832655 FN553-S Single Base Substitution C-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN4153-S.SNP.9:10833030 chr09:010833030 0 W/10833030-10833030 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.869784;DP=2913;DP4=1285,1535,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=2.52948e-07;MQSB=2.56759e-16;RPB=0.940758;SGB=78.9707;VDB=0.672677;EFF=INTRON(MODIFIER||||139|LOC_Os09g17720|protein_coding|CODING|LOC_Os09g17720.1|1|1) FN2476.SNP.9:10839288 chr09:010839288 0 W/10839288-10839288 FN2476 SNP G -> A AC=1;AN=200;BQB=0.0500362;DP=4652;DP4=2162,2292,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4091e-06;MQSB=0.167125;RPB=0.999868;SGB=4.67442;VDB=0.858768;EFF=UTR_5_PRIME(MODIFIER||342||627|LOC_Os09g17730|protein_coding|CODING|LOC_Os09g17730.1|2|1),INTRON(MODIFIER||||627|LOC_Os09g17730|protein_coding|CODING|LOC_Os09g17730.2|1|1) FN2329.SNP.9:10841686 chr09:010841686 0 W/10841686-10841686 FN2329 SNP A -> G AC=1;AN=192;BQB=0.94531;DP=5081;DP4=2372,2325,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.34859e-15;MQSB=0.962035;RPB=0.931181;SGB=86.1165;VDB=0.600387;EFF=INTRON(MODIFIER||||627|LOC_Os09g17730|protein_coding|CODING|LOC_Os09g17730.1|6|1),INTRON(MODIFIER||||627|LOC_Os09g17730|protein_coding|CODING|LOC_Os09g17730.2|5|1) FN3490-S.SNP.9:10850315 chr09:010850315 0 W/10850315-10850315 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.89852;DP=2714;DP4=1206,1396,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.48818e-16;MQSB=0.972849;RPB=0.853245;SGB=112.047;VDB=0.359838;EFF=UTR_3_PRIME(MODIFIER||297||286|LOC_Os09g17750|protein_coding|CODING|LOC_Os09g17750.2|7|1),INTRON(MODIFIER||||369|LOC_Os09g17750|protein_coding|CODING|LOC_Os09g17750.1|7|1) FN-77.SNP.9:10852116 chr09:010852116 0 W/10852116-10852116 FN-77 Single Base Substitution T-G INTRON HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN3815-S.SNP.9:10866806 chr09:010866806 0 W/10866806-10866806 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.938679;DP=2828;DP4=1478,1189,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08196e-05;MQSB=0.999121;RPB=0.733588;SGB=30.8803;VDB=0.514278;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.9:10876601 chr09:010876601 0 W/10876601-10876601 FN705-S Single Base Substitution A-T INTRON HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN3548-S.SNP.9:10877594 chr09:010877594 0 W/10877594-10877594 FN3548-S SNP C -> T AC=2;AN=188;BQB=0.886455;DP=2891;DP4=1747,1064,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.36983e-15;MQSB=0.554525;RPB=0.850294;SGB=121.672;VDB=0.132826;EFF=INTRON(MODIFIER||||269|LOC_Os09g17770|protein_coding|CODING|LOC_Os09g17770.1|1|1) FN-174.SNP.9:10877980 chr09:010877980 0 W/10877980-10877980 FN-174 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3827-S.SNP.9:10879469 chr09:010879469 0 W/10879469-10879469 FN3827-S SNP C -> T AC=1;AN=190;BQB=0.543071;DP=1941;DP4=998,867,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=0.00605583;MQSB=0.0694042;RPB=0.740097;SGB=32.5467;VDB=0.815244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.9:10880776 chr09:010880776 0 W/10880776-10880776 FN1414-S Single Base Substitution T-C INTRON HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1065-S.SNP.9:10886797 chr09:010886797 0 W/10886797-10886797 FN1065-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3661-S.SNP.9:10888655 chr09:010888655 0 W/10888655-10888655 FN3661-S SNP T -> C AC=1;AN=190;BQB=0.0459431;DP=2846;DP4=1348,1412,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00243318;MQSB=0.717001;RPB=0.849955;SGB=21.1058;VDB=0.303442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T373A|1055|LOC_Os09g17800|protein_coding|CODING|LOC_Os09g17800.1|2|1) FN2142-S.SNP.9:10900226 chr09:010900226 0 W/10900226-10900226 FN2142-S SNP T -> C AC=1;AN=168;BQB=0.000385721;DP=3705;DP4=1893,1774,14,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.97421e-07;MQSB=0.977115;RPB=0.911063;SGB=-141.204;VDB=0.661349;EFF=UTR_3_PRIME(MODIFIER||318||598|LOC_Os09g17810|protein_coding|CODING|LOC_Os09g17810.1|1|1) FN4149-S.SNP.9:10902320 chr09:010902320 0 W/10902320-10902320 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.965524;DP=2558;DP4=1208,1280,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=2.45331e-08;MQSB=0.00169756;RPB=0.801817;SGB=56.7575;VDB=0.123939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.9:10903794 chr09:010903794 0 W/10903794-10903794 FN1388-S Single Base Substitution T-G INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2204-S.SNP.9:10904392 chr09:010904392 0 W/10904392-10904392 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.120669;DP=4117;DP4=2061,1828,17,11;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=3.96704e-12;MQSB=0.0705119;RPB=0.999819;SGB=56.8601;VDB=0.629061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.9:10907822 chr09:010907822 0 W/10907822-10907822 FN2545-S SNP C -> A AC=1;AN=198;BQB=0.296721;DP=4453;DP4=2359,1889,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.0194e-06;MQSB=0.116772;RPB=0.973846;SGB=-0.221308;VDB=0.189099;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G179C|485|LOC_Os09g17830|protein_coding|CODING|LOC_Os09g17830.1|2|1) FN1375-S.SNP.9:10907914 chr09:010907914 0 W/10907914-10907914 FN1375-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g17830 protein transport protein Sec61 subunit alpha, putative, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1280-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN1280-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2544-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN2544-S SNP T -> C AC=1;AN=198;BQB=0.903091;DP=4413;DP4=2377,1812,17,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.73459e-12;MQSB=0.828958;RPB=0.249269;SGB=72.5051;VDB=0.63654;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN3368-S SNP T -> C AC=2;AN=184;BQB=0.609258;DP=2913;DP4=1517,1250,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.81721e-09;MQSB=0.261725;RPB=0.97853;SGB=78.0093;VDB=0.302486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN3434-S SNP T -> C AC=2;AN=184;BQB=0.935261;DP=2774;DP4=1361,1260,14,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.87338e-17;MQSB=0.0640044;RPB=0.710388;SGB=161.787;VDB=0.297918;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN3729-S SNP T -> C AC=2;AN=190;BQB=0.731666;DP=3046;DP4=1591,1296,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.75846e-15;MQSB=0.278206;RPB=0.120858;SGB=158.388;VDB=0.0145559;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN489-S Single Base Substitution T-C INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN926-S.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 FN926-S Single Base Substitution T-C INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. W472-5-1.SNP.9:10913480 chr09:010913480 0 W/10913480-10913480 W472-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2471.SNP.9:10915008 chr09:010915008 0 W/10915008-10915008 FN2471 SNP T -> C AC=1;AN=200;BQB=0.858234;DP=2723;DP4=1122,1450,5,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=4.62092e-08;MQSB=0.601549;RPB=0.640771;SGB=43.8747;VDB=0.000213376;EFF=INTERGENIC(MODIFIER||||||||||1) FN899-S.SNP.9:10926085 chr09:010926085 0 W/10926085-10926085 FN899-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN1114-S.SNP.9:10928387 chr09:010928387 0 W/10928387-10928387 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN2086-S.SNP.9:10939086 chr09:010939086 0 W/10939086-10939086 FN2086-S SNP G -> A AC=1;AN=168;BQB=0.534007;DP=3320;DP4=1616,1648,18,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.11843e-14;MQSB=0.922279;RPB=0.889855;SGB=-82.1908;VDB=0.377332;EFF=INTRON(MODIFIER||||383|LOC_Os09g17880|protein_coding|CODING|LOC_Os09g17880.1|4|1) FN2452.SNP.9:10940325 chr09:010940325 0 W/10940325-10940325 FN2452 SNP C -> T AC=2;AN=200;BQB=0.0962389;DP=2832;DP4=1368,936,21,13;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.63119e-08;MQSB=1.72649e-15;RPB=0.715783;SGB=-235.028;VDB=0.96708;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.9:10955223 chr09:010955223 0 W/10955223-10955223 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1754-S.SNP.9:10980646 chr09:010980646 0 W/10980646-10980646 FN1754-S SNP C -> A AC=1;AN=188;BQB=0.916176;DP=3381;DP4=1542,1808,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.54297e-06;MQSB=0.999038;RPB=0.696808;SGB=48.979;VDB=0.820586;EFF=INTRON(MODIFIER||||527|LOC_Os09g17930|protein_coding|CODING|LOC_Os09g17930.1|1|1) FN3465-S.SNP.9:10981458 chr09:010981458 0 W/10981458-10981458 FN3465-S SNP C -> A AC=1;AN=184;BQB=0.484157;DP=2825;DP4=1225,1208,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=2.25447e-07;MQSB=0.929708;RPB=0.99601;SGB=8.32411;VDB=0.682974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.9:10981462 chr09:010981462 0 W/10981462-10981462 FN3465-S SNP G -> C AC=1;AN=184;BQB=0.557248;DP=2833;DP4=1252,1232,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=1.93291e-07;MQSB=0.792091;RPB=0.997452;SGB=62.3078;VDB=0.412108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.9:10984281 chr09:010984281 0 W/10984281-10984281 FN2138-S SNP T -> G AC=1;AN=168;BQB=0.999953;DP=3999;DP4=2324,1627,22,13;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.39056e-10;MQSB=0.000445641;RPB=0.234659;SGB=-8.04863;VDB=0.948231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.9:10984900 chr09:010984900 0 W/10984900-10984900 FN1256-S Single Base Substitution T-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN-299.SNP.9:10997562 chr09:010997562 0 W/10997562-10997562 FN-299 Single Base Substitution G-A INTRON HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1577-S.SNP.9:10998745 chr09:010998745 0 W/10998745-10998745 FN1577-S Single Base Substitution G-A INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4229-S.SNP.9:11001375 chr09:011001375 0 W/11001375-11001375 FN4229-S SNP G -> A AC=2;AN=170;BQB=0.955992;DP=2850;DP4=1560,1227,12,13;HOB=0.0232526;ICB=0.494188;MQ=33;MQ0F=0;MQB=2.17409e-09;MQSB=0.791694;RPB=0.556428;SGB=105.627;VDB=0.958947;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C75Y|104|LOC_Os09g17980|protein_coding|CODING|LOC_Os09g17980.1|2|1) FN492-S.SNP.9:11016650 chr09:011016650 0 W/11016650-11016650 FN492-S Single Base Substitution A-C INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN812-S.SNP.9:11027962 chr09:011027962 0 W/11027962-11027962 FN812-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g18010 expressed protein SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN896-S.SNP.9:11028009 chr09:011028009 0 W/11028009-11028009 FN896-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g18010 expressed protein SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2261-S.SNP.9:11031372 chr09:011031372 0 W/11031372-11031372 FN2261-S SNP C -> T AC=1;AN=190;BQB=0.967478;DP=4842;DP4=2187,2369,23,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37249e-23;MQSB=0.955929;RPB=0.993442;SGB=44.5119;VDB=0.610505;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K802|863|LOC_Os09g18020|protein_coding|CODING|LOC_Os09g18020.1|12|1) FN3427-S.SNP.9:11035750 chr09:011035750 0 W/11035750-11035750 FN3427-S SNP C -> G AC=2;AN=184;BQB=0.913832;DP=2787;DP4=1170,1539,6,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.56661e-07;MQSB=0.985417;RPB=0.977785;SGB=44.2207;VDB=0.572721;EFF=INTRON(MODIFIER||||863|LOC_Os09g18020|protein_coding|CODING|LOC_Os09g18020.1|5|1) FN2129-S.SNP.9:11041907 chr09:011041907 0 W/11041907-11041907 FN2129-S SNP G -> T AC=1;AN=168;BQB=0.057368;DP=3993;DP4=2278,1651,21,24;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.35583e-19;MQSB=0.974319;RPB=0.999653;SGB=-152.015;VDB=0.955091;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.9:11041965 chr09:011041965 0 W/11041965-11041965 FN1468-S Single Base Substitution T-C INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN703-S.SNP.9:11043095 chr09:011043095 0 W/11043095-11043095 FN703-S Single Base Substitution G-A INTERGENIC HOMO SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN_398-1.SNP.9:11044121 chr09:011044121 0 W/11044121-11044121 FN_398-1 Single Base Substitution C-T INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN2696-S.SNP.9:11044317 chr09:011044317 0 W/11044317-11044317 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.458638;DP=4907;DP4=2250,2423,18,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.91683e-08;MQSB=0.629585;RPB=0.996418;SGB=-5.24302;VDB=0.741682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.9:11065280 chr09:011065280 0 W/11065280-11065280 FN2358 SNP G -> A AC=1;AN=192;BQB=0.105111;DP=4642;DP4=2146,2124,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=0.00709729;MQSB=0.85797;RPB=0.717395;SGB=25.5227;VDB=0.362972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2266-S.SNP.9:11068613 chr09:011068613 0 W/11068613-11068613 FN2266-S SNP C -> T AC=1;AN=190;BQB=0.348248;DP=2598;DP4=1184,1009,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000769823;MQB=0.00318366;MQSB=0.544057;RPB=0.779121;SGB=44.5415;VDB=0.429561;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P56L|111|LOC_Os09g18050|protein_coding|CODING|LOC_Os09g18050.1|1|1) FN2089-S.SNP.9:11071685 chr09:011071685 0 W/11071685-11071685 FN2089-S SNP C -> A AC=1;AN=168;BQB=0.472791;DP=2446;DP4=943,1463,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.56741e-08;MQSB=0.998262;RPB=0.590525;SGB=-38.9357;VDB=0.742236;EFF=INTERGENIC(MODIFIER||||||||||1) FN185-2_3_4.SNP.9:11072426 chr09:011072426 0 W/11072426-11072426 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.285828;DP=3072;DP4=1459,1574,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06372e-09;MQSB=0.98584;RPB=0.397888;SGB=14.798;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.9:11073337 chr09:011073337 0 W/11073337-11073337 FN2312 SNP G -> T AC=1;AN=192;BQB=0.317573;DP=4810;DP4=2181,2296,8,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.84519e-12;MQSB=0.98628;RPB=0.491996;SGB=-38.813;VDB=0.212683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.9:11080901 chr09:011080901 0 W/11080901-11080901 FN-263 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g18080 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN2785-S.SNP.9:11081648 chr09:011081648 0 W/11081648-11081648 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.837052;DP=4226;DP4=1905,2082,16,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000946522;MQB=1.27864e-14;MQSB=0.171089;RPB=0.593593;SGB=86.8856;VDB=0.704513;EFF=INTRON(MODIFIER||||1084|LOC_Os09g18080|protein_coding|CODING|LOC_Os09g18080.1|3|1) FN901-S.SNP.9:11084551 chr09:011084551 0 W/11084551-11084551 FN901-S Single Base Substitution C-G INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1007-S.SNP.9:11086610 chr09:011086610 0 W/11086610-11086610 FN1007-S Single Base Substitution G-T INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN2674-S.SNP.9:11087792 chr09:011087792 0 W/11087792-11087792 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.613498;DP=4836;DP4=2370,2231,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.10509e-14;MQSB=0.956331;RPB=0.920682;SGB=-38.0794;VDB=0.699029;EFF=INTRON(MODIFIER||||542|LOC_Os09g18090|protein_coding|CODING|LOC_Os09g18090.1|2|1) FN-281.SNP.9:11090714 chr09:011090714 0 W/11090714-11090714 FN-281 Single Base Substitution G-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1423-S.SNP.9:11095881 chr09:011095881 0 W/11095881-11095881 FN1423-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1423-S.SNP.9:11095882 chr09:011095882 0 W/11095882-11095882 FN1423-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g18100 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-26.SNP.9:11097347 chr09:011097347 0 W/11097347-11097347 FN-26 Single Base Substitution G-A INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN2403.SNP.9:11101152 chr09:011101152 0 W/11101152-11101152 FN2403 SNP T -> A AC=1;AN=200;BQB=0.00251508;DP=4675;DP4=2432,1757,6,18;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0;MQB=4.79163e-07;MQSB=0.340207;RPB=0.816234;SGB=-95.2797;VDB=0.246242;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.9:11102139 chr09:011102139 0 W/11102139-11102139 FN2105-S SNP C -> A AC=1;AN=168;BQB=0.438071;DP=3207;DP4=1555,1607,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.07942e-06;MQSB=0.980855;RPB=0.995471;SGB=-18.3882;VDB=0.977644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.9:11106990 chr09:011106990 0 W/11106990-11106990 FN3779-S SNP C -> T AC=1;AN=190;BQB=0.9163;DP=2688;DP4=1190,1403,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09418e-09;MQSB=0.399028;RPB=0.561272;SGB=67.3108;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.9:11109877 chr09:011109877 0 W/11109877-11109877 FN411-S Single Base Substitution A-C INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2258-S.SNP.9:11113466 chr09:011113466 0 W/11113466-11113466 FN2258-S SNP A -> T AC=1;AN=190;BQB=0.592429;DP=4552;DP4=2179,2137,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.86878e-06;MQSB=0.989038;RPB=0.445625;SGB=2.55724;VDB=0.643015;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.9:11115605 chr09:011115605 0 W/11115605-11115605 FN_788-1-1 Single Base Substitution G-T HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN730-S.SNP.9:11117043 chr09:011117043 0 W/11117043-11117043 FN730-S Single Base Substitution A-T INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-256.SNP.9:11123212 chr09:011123212 0 W/11123212-11123212 FN-256 Single Base Substitution T-C INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN4036-S.SNP.9:11134156 chr09:011134156 0 W/11134156-11134156 FN4036-S SNP A -> G AC=1;AN=168;BQB=0.952087;DP=2879;DP4=904,1780,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00312609;MQB=0.805784;MQSB=0.379307;RPB=0.887995;SGB=19.7539;VDB=0.851906;EFF=INTRON(MODIFIER||||675|LOC_Os09g18159|protein_coding|CODING|LOC_Os09g18159.1|2|1) FN3843-S.SNP.9:11156927 chr09:011156927 0 W/11156927-11156927 FN3843-S SNP C -> T AC=1;AN=190;BQB=0.441897;DP=2742;DP4=1234,1412,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02664e-10;MQSB=0.905041;RPB=0.37989;SGB=36.4291;VDB=0.209278;EFF=INTRON(MODIFIER||||542|LOC_Os09g18200|protein_coding|CODING|LOC_Os09g18200.1|3|1) FN1026-S.SNP.9:11162605 chr09:011162605 0 W/11162605-11162605 FN1026-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g18210 transposon protein, putative, CACTA, En/Spm sub-class SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1732-S.SNP.9:11163357 chr09:011163357 0 W/11163357-11163357 FN1732-S SNP C -> T AC=2;AN=188;BQB=0.994961;DP=1458;DP4=365,1057,3,10;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=7.52107e-05;MQSB=1.28419e-05;RPB=0.00754254;SGB=35.9843;VDB=0.130583;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.9:11165165 chr09:011165165 0 W/11165165-11165165 FN490-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN515-S.SNP.9:11166764 chr09:011166764 0 W/11166764-11166764 FN515-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN1349-S.SNP.9:11168901 chr09:011168901 0 W/11168901-11168901 FN1349-S Single Base Substitution A-G INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-182.SNP.9:11169656 chr09:011169656 0 W/11169656-11169656 FN-182 Single Base Substitution G-T INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3840-S.SNP.9:11172061 chr09:011172061 0 W/11172061-11172061 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.899725;DP=2589;DP4=1250,1232,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.68981e-10;MQSB=0.999892;RPB=0.892362;SGB=57.4238;VDB=0.393334;EFF=INTRON(MODIFIER||||861|LOC_Os09g18230|protein_coding|CODING|LOC_Os09g18230.1|11|1) FN-194.SNP.9:11173976 chr09:011173976 0 W/11173976-11173976 FN-194 Single Base Substitution A-G INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1406-S.SNP.9:11198184 chr09:011198184 0 W/11198184-11198184 FN1406-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3637-S.SNP.9:11200189 chr09:011200189 0 W/11200189-11200189 FN3637-S SNP T -> C AC=1;AN=190;BQB=0.735157;DP=2988;DP4=1428,1450,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.00628e-05;MQSB=0.827441;RPB=0.734635;SGB=28.9929;VDB=0.393696;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F674|936|LOC_Os09g18240|protein_coding|CODING|LOC_Os09g18240.1|9|1) FN3859-S.SNP.9:11200974 chr09:011200974 0 W/11200974-11200974 FN3859-S SNP A -> T AC=1;AN=158;BQB=0.964517;DP=2577;DP4=1006,1444,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.29234e-06;MQSB=0.999345;RPB=0.992833;SGB=33.9591;VDB=0.666297;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y936F|936|LOC_Os09g18240|protein_coding|CODING|LOC_Os09g18240.1|9|1) FN2080-S.SNP.9:11203382 chr09:011203382 0 W/11203382-11203382 FN2080-S SNP T -> A AC=1;AN=168;BQB=0.00693331;DP=3715;DP4=1596,2088,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39105e-06;MQSB=0.986324;RPB=0.489752;SGB=-112.21;VDB=0.354443;EFF=INTRON(MODIFIER||||372|LOC_Os09g18250|protein_coding|CODING|LOC_Os09g18250.1|1|1) FN972-S.SNP.9:11206557 chr09:011206557 0 W/11206557-11206557 FN972-S Single Base Substitution A-G INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-32.SNP.9:11207070 chr09:011207070 0 W/11207070-11207070 FN-32 Single Base Substitution T-C INTERGENIC Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN-172.SNP.9:11209303 chr09:011209303 0 W/11209303-11209303 FN-172 Single Base Substitution A-T INTRON HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN2158-S.SNP.9:11212401 chr09:011212401 0 W/11212401-11212401 FN2158-S SNP G -> A AC=1;AN=168;BQB=0.615904;DP=3361;DP4=1868,1459,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43819e-05;MQSB=0.802005;RPB=0.576602;SGB=-0.101747;VDB=0.419848;EFF=INTRON(MODIFIER||||852|LOC_Os09g18260|protein_coding|CODING|LOC_Os09g18260.1|1|1) FN-100.SNP.9:11213067 chr09:011213067 0 W/11213067-11213067 FN-100 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g18260 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN1268-S.SNP.9:11214549 chr09:011214549 0 W/11214549-11214549 FN1268-S Single Base Substitution C-G INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2684-S.SNP.9:11214995 chr09:011214995 0 W/11214995-11214995 FN2684-S SNP A -> G AC=1;AN=200;BQB=0.105205;DP=4893;DP4=2284,2327,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.35004e-15;MQSB=0.851346;RPB=0.818881;SGB=-10.0844;VDB=0.00601836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.9:11219296 chr09:011219296 0 W/11219296-11219296 FN2551-S SNP A -> G AC=1;AN=198;BQB=0.796531;DP=3750;DP4=1653,1862,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.5857e-09;MQSB=0.741902;RPB=0.708176;SGB=61.7198;VDB=0.955023;EFF=INTRON(MODIFIER||||145|LOC_Os09g18280|protein_coding|CODING|LOC_Os09g18280.1|1|1) FN4050-S.SNP.9:11219695 chr09:011219695 0 W/11219695-11219695 FN4050-S SNP T -> C AC=1;AN=168;BQB=0.974852;DP=2267;DP4=1175,1025,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.25882e-07;MQSB=0.981696;RPB=0.991132;SGB=47.7421;VDB=0.192767;EFF=INTRON(MODIFIER||||145|LOC_Os09g18280|protein_coding|CODING|LOC_Os09g18280.1|3|1) FN2218-S.SNP.9:11219819 chr09:011219819 0 W/11219819-11219819 FN2218-S SNP G -> C AC=1;AN=190;BQB=0.341279;DP=5182;DP4=2102,2584,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000192976;MQB=3.9289e-10;MQSB=0.616763;RPB=0.691348;SGB=-13.222;VDB=0.712722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E120D|145|LOC_Os09g18280|protein_coding|CODING|LOC_Os09g18280.1|4|1) FN1687-S.SNP.9:11224402 chr09:011224402 0 W/11224402-11224402 FN1687-S SNP G -> C AC=2;AN=188;BQB=0.108631;DP=4262;DP4=2206,1981,44,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.02454e-31;MQSB=0.993785;RPB=0.875773;SGB=78.0731;VDB=0.888641;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.9:11227918 chr09:011227918 0 W/11227918-11227918 FN4064-S SNP G -> A AC=1;AN=168;BQB=0.938803;DP=2634;DP4=1259,1276,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0558087;MQB=0.217372;MQSB=0.291432;RPB=0.61876;SGB=29.4772;VDB=0.447322;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.9:11231189 chr09:011231189 0 W/11231189-11231189 FN4260-S SNP T -> A AC=1;AN=170;BQB=0.625613;DP=2682;DP4=1221,1328,10,15;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00149142;MQB=1.12722e-10;MQSB=0.472291;RPB=0.956567;SGB=76.1898;VDB=0.669495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.9:11231408 chr09:011231408 0 W/11231408-11231408 FN1202-S Single Base Substitution G-A INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1617-S.SNP.9:11234113 chr09:011234113 0 W/11234113-11234113 FN1617-S Single Base Substitution T-C INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2098-S.SNP.9:11238578 chr09:011238578 0 W/11238578-11238578 FN2098-S SNP A -> T AC=1;AN=168;BQB=0.0336828;DP=3921;DP4=1906,1974,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.87411e-09;MQSB=0.983479;RPB=0.405004;SGB=-110.908;VDB=0.91108;EFF=INTRON(MODIFIER||||460|LOC_Os09g18320|protein_coding|CODING|LOC_Os09g18320.1|4|1) FN2673-S.SNP.9:11242411 chr09:011242411 0 W/11242411-11242411 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.581416;DP=4658;DP4=2226,2183,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.02749e-09;MQSB=0.809669;RPB=0.278091;SGB=58.8698;VDB=0.0337235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.9:11244442 chr09:011244442 0 W/11244442-11244442 FN3574-S SNP A -> G AC=1;AN=188;BQB=0.939558;DP=2866;DP4=1441,1273,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.47556e-07;MQSB=0.953978;RPB=0.788401;SGB=39.5276;VDB=0.506023;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.9:11245517 chr09:011245517 0 W/11245517-11245517 FN739-S Single Base Substitution C-A INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2485.SNP.9:11247129 chr09:011247129 0 W/11247129-11247129 FN2485 SNP C -> T AC=1;AN=200;BQB=0.841433;DP=5073;DP4=2426,2261,5,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30643e-10;MQSB=0.973263;RPB=0.727925;SGB=77.2904;VDB=0.515703;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.9:11247835 chr09:011247835 0 W/11247835-11247835 FN4047-S SNP G -> A AC=2;AN=168;BQB=0.998495;DP=2795;DP4=1244,1416,21,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.53805e-13;MQSB=0.190366;RPB=0.341831;SGB=79.3486;VDB=0.786374;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q32|155|LOC_Os09g18330|protein_coding|CODING|LOC_Os09g18330.1|1|1) FN588-S.SNP.9:11248646 chr09:011248646 0 W/11248646-11248646 FN588-S Single Base Substitution C-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2486.SNP.9:11248793 chr09:011248793 0 W/11248793-11248793 FN2486 SNP G -> C AC=1;AN=200;BQB=0.983561;DP=4616;DP4=2279,2074,31,28;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27397e-35;MQSB=0.951576;RPB=0.633502;SGB=11.7017;VDB=0.567817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.9:11260000 chr09:011260000 0 W/11260000-11260000 FN2660-S SNP T -> C AC=2;AN=200;BQB=0.650091;DP=5058;DP4=2514,2312,19,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.28906e-16;MQSB=0.880284;RPB=0.958568;SGB=90.7419;VDB=0.558647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K678E|881|LOC_Os09g18360|protein_coding|CODING|LOC_Os09g18360.1|10|1) FN2660-S.SNP.9:11260005 chr09:011260005 0 W/11260005-11260005 FN2660-S SNP C -> A AC=2;AN=200;BQB=0.130978;DP=5039;DP4=2486,2289,17,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.80054e-18;MQSB=0.965394;RPB=0.483476;SGB=87.1368;VDB=0.318809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W676L|881|LOC_Os09g18360|protein_coding|CODING|LOC_Os09g18360.1|10|1) FN628-S.SNP.9:11260066 chr09:011260066 0 W/11260066-11260066 FN628-S Single Base Substitution T-A INTRON HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1684-S.SNP.9:11264984 chr09:011264984 0 W/11264984-11264984 FN1684-S SNP A -> G AC=1;AN=188;BQB=0.130663;DP=3087;DP4=1657,1383,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.37592e-08;MQSB=0.995636;RPB=0.690151;SGB=-36.4511;VDB=0.6564;EFF=INTRON(MODIFIER||||881|LOC_Os09g18360|protein_coding|CODING|LOC_Os09g18360.1|3|1) FN2390.SNP.9:11267171 chr09:011267171 0 W/11267171-11267171 FN2390 SNP A -> T AC=1;AN=200;BQB=0.461086;DP=4764;DP4=2214,2228,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.80682e-10;MQSB=0.973983;RPB=0.988614;SGB=39.9056;VDB=0.789758;EFF=INTRON(MODIFIER||||881|LOC_Os09g18360|protein_coding|CODING|LOC_Os09g18360.1|2|1) FN3368-S.SNP.9:11285332 chr09:011285332 0 W/11285332-11285332 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.881614;DP=1621;DP4=847,688,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0178902;MQB=0.697968;MQSB=0;RPB=0.444853;SGB=21.6609;VDB=0.101769;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.9:11289078 chr09:011289078 0 W/11289078-11289078 FN3810-S SNP T -> G AC=1;AN=190;BQB=0.557148;DP=3143;DP4=1200,1716,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=5.27936e-07;MQSB=8.35777e-07;RPB=0.294458;SGB=7.21887;VDB=0.241586;EFF=INTRON(MODIFIER||||172|LOC_Os09g18390|protein_coding|CODING|LOC_Os09g18390.1|1|1) FN543-S.SNP.9:11293830 chr09:011293830 0 W/11293830-11293830 FN543-S Single Base Substitution C-A INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN1250-S.SNP.9:11294416 chr09:011294416 0 W/11294416-11294416 FN1250-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1757-S.SNP.9:11294416 chr09:011294416 0 W/11294416-11294416 FN1757-S SNP C -> T AC=2;AN=188;BQB=0.594934;DP=2797;DP4=1755,1007,15,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.11162e-12;MQSB=0.935481;RPB=0.968358;SGB=20.9711;VDB=0.912489;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.9:11294416 chr09:011294416 0 W/11294416-11294416 FN2334 SNP C -> T AC=2;AN=192;BQB=0.241289;DP=4925;DP4=2266,2377,14,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.2765e-15;MQSB=0.971153;RPB=0.652977;SGB=59.6861;VDB=0.449371;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.9:11297343 chr09:011297343 0 W/11297343-11297343 FN498-S Single Base Substitution C-T INTRON HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1026-S.SNP.9:11298818 chr09:011298818 0 W/11298818-11298818 FN1026-S Single Base Substitution A-T INTERGENIC HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN2792-S.SNP.9:11321370 chr09:011321370 0 W/11321370-11321370 FN2792-S SNP C -> A AC=1;AN=198;BQB=0.995319;DP=4168;DP4=2104,1866,11,2;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.356046;MQB=0.071921;MQSB=0;RPB=0.946514;SGB=36.5539;VDB=0.936804;EFF=INTRON(MODIFIER||||282|LOC_Os09g18470|protein_coding|CODING|LOC_Os09g18470.1|2|1) FN2204-S.SNP.9:11323508 chr09:011323508 0 W/11323508-11323508 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.883387;DP=4732;DP4=2071,2468,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.15466e-14;MQSB=0.147425;RPB=0.999932;SGB=82.301;VDB=0.18563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.9:11324131 chr09:011324131 0 W/11324131-11324131 FN1012-S Single Base Substitution C-T INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. 702-1.SNP.9:11330461 chr09:011330461 0 W/11330461-11330461 702-1 Single Base Substitution C-G INTERGENIC Homo SNo: 1443, Mutant_ID: 702-1, Generation: M2, Mutations: 29, Genes: 12, Seed availability: Yes. FN852-S.SNP.9:11334504 chr09:011334504 0 W/11334504-11334504 FN852-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3713-S.SNP.9:11339492 chr09:011339492 0 W/11339492-11339492 FN3713-S SNP G -> A AC=1;AN=190;BQB=0.902032;DP=2943;DP4=1368,1458,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.0717e-07;MQSB=0.586331;RPB=0.458093;SGB=53.6492;VDB=0.642829;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R782*|1006|LOC_Os09g18500|protein_coding|CODING|LOC_Os09g18500.1|2|1) FN1505-S.SNP.9:11341540 chr09:011341540 0 W/11341540-11341540 FN1505-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g18500 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN689-S.SNP.9:11341555 chr09:011341555 0 W/11341555-11341555 FN689-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g18500 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN689-S.SNP.9:11341557 chr09:011341557 0 W/11341557-11341557 FN689-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g18500 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN689-S.SNP.9:11341559 chr09:011341559 0 W/11341559-11341559 FN689-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g18500 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN_N1-169-1.SNP.9:11342768 chr09:011342768 0 W/11342768-11342768 FN_N1-169-1 Single Base Substitution A-T HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2597-S.SNP.9:11344302 chr09:011344302 0 W/11344302-11344302 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.813365;DP=4279;DP4=1950,2127,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0168264;MQB=0.000518975;MQSB=0.974277;RPB=0.319729;SGB=20.5152;VDB=0.278313;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.9:11345886 chr09:011345886 0 W/11345886-11345886 FN-366 Single Base Substitution G-T INTERGENIC HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN968-S.SNP.9:11345886 chr09:011345886 0 W/11345886-11345886 FN968-S Single Base Substitution G-T INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN-216.SNP.9:11350754 chr09:011350754 0 W/11350754-11350754 FN-216 Single Base Substitution T-A INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2529-S.SNP.9:11352151 chr09:011352151 0 W/11352151-11352151 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.937564;DP=4295;DP4=2142,1959,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.59895e-09;MQSB=0.860467;RPB=0.72911;SGB=21.559;VDB=0.260844;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.9:11356548 chr09:011356548 0 W/11356548-11356548 FN4179-S SNP C -> A AC=1;AN=170;BQB=0.697129;DP=2586;DP4=1324,1183,10,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.93475e-10;MQSB=0.992341;RPB=0.611259;SGB=87.856;VDB=0.887235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2545-S.SNP.9:11368143 chr09:011368143 0 W/11368143-11368143 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.809956;DP=3803;DP4=1827,1826,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.07301e-08;MQSB=0.99836;RPB=0.876806;SGB=49.5489;VDB=0.898787;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.9:11369841 chr09:011369841 0 W/11369841-11369841 FN4098-S SNP C -> T AC=2;AN=182;BQB=0.860746;DP=3041;DP4=1456,1420,17,10;HOB=0.0217365;ICB=0.494567;MQ=38;MQ0F=0.0608352;MQB=0.454233;MQSB=1.25076e-36;RPB=0.898655;SGB=53.2744;VDB=0.598228;EFF=INTERGENIC(MODIFIER||||||||||1) FN1715-S.SNP.9:11371373 chr09:011371373 0 W/11371373-11371373 FN1715-S SNP C -> T AC=2;AN=188;BQB=0.0735271;DP=2229;DP4=956,1204,9,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.84676e-09;MQSB=0.389071;RPB=0.882086;SGB=-9.02352;VDB=0.510456;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.9:11376173 chr09:011376173 0 W/11376173-11376173 FN-217 Single Base Substitution A-T INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2498.SNP.9:11377348 chr09:011377348 0 W/11377348-11377348 FN2498 SNP C -> T AC=2;AN=200;BQB=0.633039;DP=5023;DP4=2670,2054,28,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34355e-26;MQSB=0.728113;RPB=0.972403;SGB=159.24;VDB=0.614818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.9:11379882 chr09:011379882 0 W/11379882-11379882 FN1202-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2532-S.SNP.9:11382828 chr09:011382828 0 W/11382828-11382828 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.468114;DP=4158;DP4=1946,1963,5,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02455e-12;MQSB=0.984958;RPB=0.627743;SGB=61.7198;VDB=0.639752;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.9:11384178 chr09:011384178 0 W/11384178-11384178 FN1636-S Single Base Substitution C-T INTERGENIC Homo SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1636-S.SNP.9:11384179 chr09:011384179 0 W/11384179-11384179 FN1636-S Single Base Substitution G-T INTERGENIC Homo SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN896-S.SNP.9:11391007 chr09:011391007 0 W/11391007-11391007 FN896-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN896-S.SNP.9:11391008 chr09:011391008 0 W/11391008-11391008 FN896-S Single Base Substitution A-T STOP_GAINED HET LOC_Os09g18594 protein kinase domain containing protein, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN1229-S.SNP.9:11395074 chr09:011395074 0 W/11395074-11395074 FN1229-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2244-S.SNP.9:11403039 chr09:011403039 0 W/11403039-11403039 FN2244-S SNP G -> A AC=2;AN=190;BQB=0.984947;DP=3922;DP4=1829,1789,24,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000254972;MQB=4.85146e-19;MQSB=0.785064;RPB=0.932709;SGB=158.388;VDB=0.104683;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.9:11403039 chr09:011403039 0 W/11403039-11403039 FN4100-S SNP G -> A AC=1;AN=182;BQB=0.367745;DP=2484;DP4=1413,1017,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000402576;MQB=3.19156e-06;MQSB=0.781043;RPB=0.773713;SGB=62.1548;VDB=0.923396;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.9:11404409 chr09:011404409 0 W/11404409-11404409 FN3543-S SNP G -> C AC=1;AN=188;BQB=0.883919;DP=3342;DP4=986,2281,2,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.31616e-09;MQSB=0.701632;RPB=0.99624;SGB=58.0655;VDB=0.593996;EFF=INTRON(MODIFIER||||660|LOC_Os09g18610|protein_coding|CODING|LOC_Os09g18610.1|2|1) FN1313-S.SNP.9:11405008 chr09:011405008 0 W/11405008-11405008 FN1313-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g18610 retrotransposon protein, putative, unclassified, expressed SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2220-S.SNP.9:11411653 chr09:011411653 0 W/11411653-11411653 FN2220-S SNP A -> G AC=1;AN=190;BQB=0.706634;DP=4170;DP4=2047,1764,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.84382e-05;MQSB=0.277498;RPB=0.95665;SGB=28.9929;VDB=0.0995804;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.9:11413928 chr09:011413928 0 W/11413928-11413928 FN863-S Single Base Substitution A-G INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1229-S.SNP.9:11414275 chr09:011414275 0 W/11414275-11414275 FN1229-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN_769-4-1.SNP.9:11426452 chr09:011426452 0 W/11426452-11426452 FN_769-4-1 Single Base Substitution G-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2542-S.SNP.9:11431652 chr09:011431652 0 W/11431652-11431652 FN2542-S SNP A -> G AC=1;AN=198;BQB=0.9994;DP=4219;DP4=1981,2027,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.27302e-09;MQSB=0.573498;RPB=0.905091;SGB=68.91;VDB=0.0180316;EFF=INTRON(MODIFIER||||841|LOC_Os09g19140|protein_coding|CODING|LOC_Os09g19140.1|3|1) FN-113.SNP.9:11437072 chr09:011437072 0 W/11437072-11437072 FN-113 Single Base Substitution C-T INTERGENIC HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN946-S.SNP.9:11445329 chr09:011445329 0 W/11445329-11445329 FN946-S Single Base Substitution G-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN1475-S.SNP.9:11446740 chr09:011446740 0 W/11446740-11446740 FN1475-S Single Base Substitution C-T INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN4063-S.SNP.9:11453521 chr09:011453521 0 W/11453521-11453521 FN4063-S SNP C -> A AC=1;AN=168;BQB=0.917976;DP=2699;DP4=1173,1371,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.12688e-07;MQSB=0.843659;RPB=0.831022;SGB=34.748;VDB=0.169243;EFF=INTRON(MODIFIER||||658|LOC_Os09g19160|protein_coding|CODING|LOC_Os09g19160.1|3|1) FN2102-S.SNP.9:11454353 chr09:011454353 0 W/11454353-11454353 FN2102-S SNP T -> C AC=1;AN=168;BQB=0.935358;DP=4299;DP4=2010,2245,18,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27593e-12;MQSB=0.997739;RPB=0.949761;SGB=-11.4952;VDB=0.402241;EFF=INTRON(MODIFIER||||658|LOC_Os09g19160|protein_coding|CODING|LOC_Os09g19160.1|3|1) FN486-S.SNP.9:11466222 chr09:011466222 0 W/11466222-11466222 FN486-S Single Base Substitution G-C INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2612-S.SNP.9:11467548 chr09:011467548 0 W/11467548-11467548 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.883368;DP=4394;DP4=2020,2031,21,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.38427e-20;MQSB=0.855329;RPB=0.802856;SGB=-44.3332;VDB=0.421414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2558-S.SNP.9:11468267 chr09:011468267 0 W/11468267-11468267 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.109084;DP=3953;DP4=1687,1991,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.67215e-14;MQSB=0.998214;RPB=0.899685;SGB=68.91;VDB=0.758168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.9:11480415 chr09:011480415 0 W/11480415-11480415 FN2478 SNP G -> A AC=2;AN=200;BQB=0.564091;DP=3956;DP4=1932,1790,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.93148e-16;MQSB=0.696708;RPB=0.960031;SGB=65.9573;VDB=0.29055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.9:11480705 chr09:011480705 0 W/11480705-11480705 FN2429 SNP A -> T AC=2;AN=200;BQB=0.946125;DP=4385;DP4=2128,1663,23,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00022805;MQB=4.67225e-13;MQSB=0.955845;RPB=0.855121;SGB=-1.612;VDB=0.750963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.9:11481360 chr09:011481360 0 W/11481360-11481360 FN1094-S Single Base Substitution G-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN836-S.SNP.9:11483164 chr09:011483164 0 W/11483164-11483164 FN836-S Single Base Substitution C-A INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN745-S.SNP.9:11487990 chr09:011487990 0 W/11487990-11487990 FN745-S Single Base Substitution C-A INTRON HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN3903-S.SNP.9:11491727 chr09:011491727 0 W/11491727-11491727 FN3903-S SNP T -> A AC=1;AN=158;BQB=0.92425;DP=2468;DP4=1028,1033,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000810373;MQB=1.81778e-05;MQSB=0.934703;RPB=0.210718;SGB=11.9715;VDB=0.161751;EFF=INTRON(MODIFIER||||854|LOC_Os09g19229|protein_coding|CODING|LOC_Os09g19229.1|5|1) FN-206.SNP.9:11492764 chr09:011492764 0 W/11492764-11492764 FN-206 Single Base Substitution G-A INTRON HOMO SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-199.SNP.9:11496597 chr09:011496597 0 W/11496597-11496597 FN-199 Single Base Substitution G-A INTRON HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-199.SNP.9:11496598 chr09:011496598 0 W/11496598-11496598 FN-199 Single Base Substitution C-A INTRON HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. 701-1.SNP.9:11497738 chr09:011497738 0 W/11497738-11497738 701-1 Single Base Substitution T-C INTRON Homo SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN916-S.SNP.9:11499595 chr09:011499595 0 W/11499595-11499595 FN916-S Single Base Substitution T-A INTRON HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1435-S.SNP.9:11499875 chr09:011499875 0 W/11499875-11499875 FN1435-S Single Base Substitution T-C INTRON HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN2650-S.SNP.9:11504756 chr09:011504756 0 W/11504756-11504756 FN2650-S SNP A -> G AC=1;AN=200;BQB=0.80372;DP=5024;DP4=2576,2235,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05453e-09;MQSB=0.692869;RPB=0.989775;SGB=72.6852;VDB=0.197752;EFF=INTRON(MODIFIER||||854|LOC_Os09g19229|protein_coding|CODING|LOC_Os09g19229.1|2|1) FN3322-S.SNP.9:11504891 chr09:011504891 0 W/11504891-11504891 FN3322-S SNP G -> A AC=2;AN=184;BQB=0.998816;DP=2839;DP4=1446,1263,12,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.45613e-10;MQSB=0.921629;RPB=0.397389;SGB=71.3514;VDB=0.592406;EFF=INTRON(MODIFIER||||854|LOC_Os09g19229|protein_coding|CODING|LOC_Os09g19229.1|2|1) FN2381.SNP.9:11507216 chr09:011507216 0 W/11507216-11507216 FN2381 SNP A -> G AC=1;AN=192;BQB=4.45157e-06;DP=4578;DP4=1850,1888,22,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000218436;MQB=3.16553e-10;MQSB=1.11401e-08;RPB=0.105947;SGB=-275.905;VDB=0.673598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.9:11510786 chr09:011510786 0 W/11510786-11510786 FN3890-S SNP A -> G AC=1;AN=158;BQB=0.932325;DP=2853;DP4=1469,1127,10,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.15243e-13;MQSB=0.98885;RPB=0.326226;SGB=-13.9519;VDB=0.906689;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.9:11526090 chr09:011526090 0 W/11526090-11526090 FN1596-S Single Base Substitution C-A INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2126-S.SNP.9:11529612 chr09:011529612 0 W/11529612-11529612 FN2126-S SNP A -> T AC=1;AN=168;BQB=0.204335;DP=3752;DP4=2008,1706,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.28041e-12;MQSB=0.167928;RPB=0.558069;SGB=-42.3508;VDB=0.661784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.9:11529668 chr09:011529668 0 W/11529668-11529668 FN2539-S SNP G -> T AC=1;AN=198;BQB=0.66771;DP=4068;DP4=1898,1970,7,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.84212e-11;MQSB=0.109507;RPB=0.992156;SGB=14.1348;VDB=0.222748;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.9:11534226 chr09:011534226 0 W/11534226-11534226 FN3901-S SNP T -> C AC=1;AN=158;BQB=0.999995;DP=2089;DP4=1082,930,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=5.6599e-08;MQSB=0.991812;RPB=0.900678;SGB=40.8124;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN996-S.SNP.9:11541782 chr09:011541782 0 W/11541782-11541782 FN996-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g19280 retrotransposon protein, putative, unclassified, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN1631-S.SNP.9:11545182 chr09:011545182 0 W/11545182-11545182 FN1631-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os09g19290 retrotransposon protein, putative, unclassified, expressed SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2652-S.SNP.9:11546082 chr09:011546082 0 W/11546082-11546082 FN2652-S SNP G -> T AC=1;AN=200;BQB=0.986697;DP=6920;DP4=3262,3269,11,12;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0215318;MQB=0.992146;MQSB=0.616571;RPB=0.968455;SGB=-10.0844;VDB=0.728551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V635L|1946|LOC_Os09g19290|protein_coding|CODING|LOC_Os09g19290.1|2|1) FN3903-S.SNP.9:11546756 chr09:011546756 0 W/11546756-11546756 FN3903-S SNP G -> A AC=1;AN=158;BQB=0.97081;DP=2536;DP4=1204,1252,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.0327287;MQB=0.394316;MQSB=1.06243e-20;RPB=0.895947;SGB=73.2838;VDB=0.201148;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P835|1946|LOC_Os09g19290|protein_coding|CODING|LOC_Os09g19290.1|3|1) FN3769-S.SNP.9:11547028 chr09:011547028 0 W/11547028-11547028 FN3769-S SNP G -> C AC=1;AN=190;BQB=0.959156;DP=4765;DP4=1930,2640,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.174397;MQB=0.088117;MQSB=0.0451566;RPB=0.609695;SGB=68.0854;VDB=0.992357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G926A|1946|LOC_Os09g19290|protein_coding|CODING|LOC_Os09g19290.1|3|1) FN3442-S.SNP.9:11547133 chr09:011547133 0 W/11547133-11547133 FN3442-S SNP C -> G AC=1;AN=184;BQB=0.994991;DP=6304;DP4=3210,2949,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0158629;MQB=0.995332;MQSB=0.912497;RPB=0.81532;SGB=62.3078;VDB=0.61371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aGg|T961R|1946|LOC_Os09g19290|protein_coding|CODING|LOC_Os09g19290.1|3|1) FN-174.SNP.9:11549046 chr09:011549046 0 W/11549046-11549046 FN-174 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g19290 retrotransposon protein, putative, unclassified, expressed SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2289.SNP.9:11549418 chr09:011549418 0 W/11549418-11549418 FN2289 SNP G -> A AC=1;AN=192;BQB=0.996359;DP=4733;DP4=2326,2045,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0526093;MQB=0.315233;MQSB=0;RPB=0.352608;SGB=-9.68954;VDB=0.144499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D1669N|1946|LOC_Os09g19290|protein_coding|CODING|LOC_Os09g19290.1|4|1) FN3802-S.SNP.9:11551661 chr09:011551661 0 W/11551661-11551661 FN3802-S SNP C -> T AC=2;AN=190;BQB=0.959596;DP=3067;DP4=1460,1500,23,18;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=3.8761e-18;MQSB=5.49506e-05;RPB=0.945654;SGB=181.158;VDB=0.446082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R719Q|978|LOC_Os09g19300|protein_coding|CODING|LOC_Os09g19300.1|1|1) FN1062-S.SNP.9:11551751 chr09:011551751 0 W/11551751-11551751 FN1062-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g19300 retrotransposon protein, putative, unclassified, expressed SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN-97.SNP.9:11568153 chr09:011568153 0 W/11568153-11568153 FN-97 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g19340 expressed protein SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3310-S.SNP.9:11583398 chr09:011583398 0 W/11583398-11583398 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.447532;DP=2700;DP4=1446,1125,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000663447;MQSB=0.981802;RPB=0.937253;SGB=-14.714;VDB=0.871302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.9:11585107 chr09:011585107 0 W/11585107-11585107 FN2286 SNP T -> A AC=2;AN=192;BQB=0.674736;DP=5591;DP4=2334,2966,30,29;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=2.44491e-25;MQSB=0.890222;RPB=0.346103;SGB=200.176;VDB=0.363065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2559-S.SNP.9:11587342 chr09:011587342 0 W/11587342-11587342 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.705169;DP=4288;DP4=2104,1956,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00010866;MQSB=0.999628;RPB=0.627179;SGB=35.7638;VDB=0.262384;EFF=INTRON(MODIFIER||||241|LOC_Os09g19360|protein_coding|CODING|LOC_Os09g19360.1|2|1) FN3574-S.SNP.9:11594892 chr09:011594892 0 W/11594892-11594892 FN3574-S SNP A -> G AC=1;AN=188;BQB=0.793813;DP=2638;DP4=1314,1264,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09905e-10;MQSB=0.97441;RPB=0.998163;SGB=80.782;VDB=0.55842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.9:11597354 chr09:011597354 0 W/11597354-11597354 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.0255635;DP=3179;DP4=1537,1592,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.64991e-06;MQSB=0.999114;RPB=0.21628;SGB=-108.641;VDB=0.956048;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.9:11599509 chr09:011599509 0 W/11599509-11599509 FN2411 SNP C -> T AC=1;AN=200;BQB=0.867984;DP=3669;DP4=1575,1840,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.61201e-14;MQSB=0.999691;RPB=0.526905;SGB=87.1368;VDB=0.420352;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.9:11600778 chr09:011600778 0 W/11600778-11600778 FN1509-S Single Base Substitution G-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1151-S.SNP.9:11602064 chr09:011602064 0 W/11602064-11602064 FN1151-S Single Base Substitution C-G INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN3424-S.SNP.9:11604367 chr09:011604367 0 W/11604367-11604367 FN3424-S SNP A -> G AC=2;AN=184;BQB=0.999994;DP=3000;DP4=1579,1162,18,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18532e-11;MQSB=0.831444;RPB=0.857995;SGB=48.493;VDB=0.393305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I6T|266|LOC_Os09g19380|protein_coding|CODING|LOC_Os09g19380.1|1|1) FN2410.SNP.9:11605832 chr09:011605832 0 W/11605832-11605832 FN2410 SNP G -> T AC=1;AN=200;BQB=0.992295;DP=4432;DP4=2129,2015,16,16;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0810018;MQB=0.00110479;MQSB=9.67868e-08;RPB=0.99138;SGB=31.9623;VDB=0.172464;EFF=INTERGENIC(MODIFIER||||||||||1) FN4148-S.SNP.9:11606050 chr09:011606050 0 W/11606050-11606050 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.571757;DP=2343;DP4=1137,1077,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=28;MQ0F=0.15749;MQB=0.282744;MQSB=0.000579513;RPB=0.393674;SGB=34.5445;VDB=0.351304;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.9:11608983 chr09:011608983 0 W/11608983-11608983 FN757-S Single Base Substitution A-T INTRON HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN4073-S.SNP.9:11609383 chr09:011609383 0 W/11609383-11609383 FN4073-S SNP T -> G AC=1;AN=182;BQB=0.969604;DP=2746;DP4=1400,1277,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.37419e-05;MQSB=0.990678;RPB=0.84482;SGB=18.0739;VDB=0.974821;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I89L|342|LOC_Os09g19390|protein_coding|CODING|LOC_Os09g19390.1|2|1),SPLICE_SITE_REGION(LOW||||342|LOC_Os09g19390|protein_coding|CODING|LOC_Os09g19390.1|2|1) FN2541-S.SNP.9:11613617 chr09:011613617 0 W/11613617-11613617 FN2541-S SNP C -> T AC=2;AN=198;BQB=0.992235;DP=1641;DP4=827,732,13,7;HOB=0.019998;ICB=0.495001;MQ=42;MQ0F=0;MQB=6.52438e-09;MQSB=0.989957;RPB=0.980893;SGB=61.7198;VDB=0.987609;EFF=INTRON(MODIFIER||||366|LOC_Os09g19400|protein_coding|CODING|LOC_Os09g19400.1|2|1) FN4084-S.SNP.9:11615059 chr09:011615059 0 W/11615059-11615059 FN4084-S SNP G -> A AC=1;AN=182;BQB=0.983859;DP=3477;DP4=1570,1838,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=4.48951e-05;MQSB=0.484451;RPB=0.717582;SGB=42.6494;VDB=0.914808;EFF=INTRON(MODIFIER||||366|LOC_Os09g19400|protein_coding|CODING|LOC_Os09g19400.1|1|1) FN1384-S.SNP.9:11627114 chr09:011627114 0 W/11627114-11627114 FN1384-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g19430 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2219-S.SNP.9:11635836 chr09:011635836 0 W/11635836-11635836 FN2219-S SNP G -> T AC=1;AN=190;BQB=0.994319;DP=4310;DP4=2326,1691,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.07824e-09;MQSB=0.846783;RPB=0.973999;SGB=11.8805;VDB=0.555673;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.9:11639168 chr09:011639168 0 W/11639168-11639168 FN-117 Single Base Substitution C-G INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN3851-S.SNP.9:11641359 chr09:011641359 0 W/11641359-11641359 FN3851-S SNP C -> T AC=1;AN=158;BQB=0.854508;DP=2961;DP4=1167,1646,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.03677e-05;MQSB=0.952387;RPB=0.107226;SGB=11.9715;VDB=0.330667;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.9:11642360 chr09:011642360 0 W/11642360-11642360 FN2375 SNP G -> A AC=1;AN=192;BQB=0.994152;DP=5451;DP4=2516,2553,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.00298e-08;MQSB=0.99987;RPB=0.301544;SGB=26.3496;VDB=0.60711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.9:11642394 chr09:011642394 0 W/11642394-11642394 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.701211;DP=2745;DP4=1303,1280,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.99192e-06;MQSB=0.881264;RPB=0.414592;SGB=38.1788;VDB=0.0829221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2321.SNP.9:11649295 chr09:011649295 0 W/11649295-11649295 FN2321 SNP G -> A AC=1;AN=192;BQB=0.278227;DP=3270;DP4=823,2186,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.00642202;MQB=0.0673804;MQSB=1.00316e-10;RPB=0.28015;SGB=16.0922;VDB=0.487101;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.9:11649656 chr09:011649656 0 W/11649656-11649656 FN229-S Single Base Substitution T-C INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1020-S.SNP.9:11654060 chr09:011654060 0 W/11654060-11654060 FN1020-S Single Base Substitution G-A INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2272-S.SNP.9:11655083 chr09:011655083 0 W/11655083-11655083 FN2272-S SNP G -> A AC=2;AN=190;BQB=0.287837;DP=4908;DP4=2307,2285,35,38;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.08653e-42;MQSB=0.986661;RPB=0.870733;SGB=326.882;VDB=0.94739;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.9:11656895 chr09:011656895 0 W/11656895-11656895 FN3664-S SNP C -> G AC=1;AN=190;BQB=0.636244;DP=2817;DP4=1430,1275,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.18459e-07;MQSB=0.971886;RPB=0.932558;SGB=43.2083;VDB=0.670706;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.9:11657418 chr09:011657418 0 W/11657418-11657418 FN1135-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. W464-2-1.SNP.9:11657582 chr09:011657582 0 W/11657582-11657582 W464-2-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN4094-S.SNP.9:11658711 chr09:011658711 0 W/11658711-11658711 FN4094-S SNP A -> G AC=1;AN=182;BQB=0.928831;DP=2677;DP4=1418,1207,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000179927;MQSB=0.985716;RPB=0.848991;SGB=30.5793;VDB=0.0795616;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.9:11658711 chr09:011658711 0 W/11658711-11658711 FN498-S Single Base Substitution A-G INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN984-S.SNP.9:11658711 chr09:011658711 0 W/11658711-11658711 FN984-S Single Base Substitution A-G INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1413-S.SNP.9:11660927 chr09:011660927 0 W/11660927-11660927 FN1413-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3360-S.SNP.9:11661357 chr09:011661357 0 W/11661357-11661357 FN3360-S SNP G -> T AC=1;AN=184;BQB=0.995233;DP=3061;DP4=1409,1561,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42585e-08;MQSB=0.972638;RPB=0.635472;SGB=42.7914;VDB=0.731125;EFF=INTRON(MODIFIER||||209|LOC_Os09g19480|protein_coding|CODING|LOC_Os09g19480.1|1|1) FN3438-S.SNP.9:11665788 chr09:011665788 0 W/11665788-11665788 FN3438-S SNP G -> A AC=1;AN=184;BQB=0.882433;DP=2652;DP4=1260,1169,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35133e-05;MQSB=0.876341;RPB=0.31164;SGB=28.7043;VDB=0.502759;EFF=INTRON(MODIFIER||||372|LOC_Os09g19500|protein_coding|CODING|LOC_Os09g19500.1|2|1) FN1053-S.SNP.9:11668829 chr09:011668829 0 W/11668829-11668829 FN1053-S Single Base Substitution C-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2739-S.SNP.9:11669730 chr09:011669730 0 W/11669730-11669730 FN2739-S SNP C -> A AC=1;AN=200;BQB=0.897993;DP=4295;DP4=2178,1865,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232829;MQB=5.8065e-08;MQSB=0.750361;RPB=0.761387;SGB=21.6694;VDB=0.284687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.9:11674773 chr09:011674773 0 W/11674773-11674773 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.934299;DP=2455;DP4=1234,1158,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60418e-09;MQSB=0.964396;RPB=0.855683;SGB=39.2697;VDB=0.317419;EFF=INTRON(MODIFIER||||457|LOC_Os09g19510|protein_coding|CODING|LOC_Os09g19510.1|4|1) FN-75.SNP.9:11676264 chr09:011676264 0 W/11676264-11676264 FN-75 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g19510 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2290.SNP.9:11676667 chr09:011676667 0 W/11676667-11676667 FN2290 SNP T -> G AC=1;AN=192;BQB=0.984655;DP=4832;DP4=2637,1934,26,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.88743e-24;MQSB=0.820637;RPB=0.992302;SGB=100.716;VDB=0.462666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.9:11679057 chr09:011679057 0 W/11679057-11679057 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.999304;DP=3396;DP4=1880,1369,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.11377e-12;MQSB=0.998663;RPB=0.896582;SGB=44.0907;VDB=0.804383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.9:11688937 chr09:011688937 0 W/11688937-11688937 FN1075-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN_N1-213-1.SNP.9:11697755 chr09:011697755 0 W/11697755-11697755 FN_N1-213-1 Single Base Substitution A-G Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN1441-S.SNP.9:11708585 chr09:011708585 0 W/11708585-11708585 FN1441-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3955-S.SNP.9:11709355 chr09:011709355 0 W/11709355-11709355 FN3955-S SNP C -> G AC=1;AN=168;BQB=0.849778;DP=2656;DP4=1410,1145,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51518e-08;MQSB=0.965409;RPB=0.456213;SGB=22.1847;VDB=0.428916;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L203V|312|LOC_Os09g19570|protein_coding|CODING|LOC_Os09g19570.1|6|1) FN1270-S.SNP.9:11709481 chr09:011709481 0 W/11709481-11709481 FN1270-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g19570 AGAP009532-PA, putative, expressed SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN-248.SNP.9:11711841 chr09:011711841 0 W/11711841-11711841 FN-248 Single Base Substitution T-C INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN_822-5-1.SNP.9:11716376 chr09:011716376 0 W/11716376-11716376 FN_822-5-1 Single Base Substitution G-C Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2649-S.SNP.9:11717057 chr09:011717057 0 W/11717057-11717057 FN2649-S SNP A -> T AC=1;AN=200;BQB=0.744888;DP=4950;DP4=2692,1924,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.25859e-10;MQSB=0.929648;RPB=0.770623;SGB=34.6953;VDB=0.954071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y17F|344|LOC_Os09g19590|protein_coding|CODING|LOC_Os09g19590.1|1|1) FN2199-S.SNP.9:11718806 chr09:011718806 0 W/11718806-11718806 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.447775;DP=5117;DP4=2434,2280,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.30819e-09;MQSB=0.72793;RPB=0.249175;SGB=44.0907;VDB=0.198573;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.9:11720553 chr09:011720553 0 W/11720553-11720553 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.981316;DP=2946;DP4=1347,1524,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.162933;MQB=0.808331;MQSB=3.94764e-17;RPB=0.911115;SGB=25.439;VDB=0.84021;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H583N|811|LOC_Os09g19600|protein_coding|CODING|LOC_Os09g19600.1|5|1) FN-133.SNP.9:11724773 chr09:011724773 0 W/11724773-11724773 FN-133 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g19610 retrotransposon protein, putative, unclassified, expressed SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN1573-S.SNP.9:11724773 chr09:011724773 0 W/11724773-11724773 FN1573-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g19610 retrotransposon protein, putative, unclassified, expressed SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2172-S.SNP.9:11724773 chr09:011724773 0 W/11724773-11724773 FN2172-S SNP C -> T AC=1;AN=168;BQB=0.973663;DP=2374;DP4=1186,1122,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.47601e-09;MQSB=0.988849;RPB=0.996326;SGB=24.6155;VDB=0.0157998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A126V|750|LOC_Os09g19610|protein_coding|CODING|LOC_Os09g19610.1|1|1) FN3781-S.SNP.9:11724773 chr09:011724773 0 W/11724773-11724773 FN3781-S SNP C -> T AC=2;AN=190;BQB=0.881551;DP=2981;DP4=1577,1294,7,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.7709e-16;MQSB=0.993738;RPB=0.831239;SGB=112.85;VDB=0.0579825;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A126V|750|LOC_Os09g19610|protein_coding|CODING|LOC_Os09g19610.1|1|1) FN3280-S.SNP.9:11727803 chr09:011727803 0 W/11727803-11727803 FN3280-S SNP C -> A AC=2;AN=184;BQB=0.87348;DP=3379;DP4=1800,1463,12,17;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.47441e-09;MQSB=0.979352;RPB=0.881143;SGB=125.613;VDB=0.131689;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A100E|190|LOC_Os09g19620|protein_coding|CODING|LOC_Os09g19620.1|1|1) FN2432.SNP.9:11730700 chr09:011730700 0 W/11730700-11730700 FN2432 SNP C -> A AC=1;AN=200;BQB=0.890248;DP=4419;DP4=2041,2098,9,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00362073;MQB=8.53792e-11;MQSB=0.821602;RPB=0.981857;SGB=76.3213;VDB=0.347191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.9:11731849 chr09:011731849 0 W/11731849-11731849 FN1464-S Single Base Substitution G-A INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN522-S.SNP.9:11733885 chr09:011733885 0 W/11733885-11733885 FN522-S Single Base Substitution C-T INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN522-S.SNP.9:11733887 chr09:011733887 0 W/11733887-11733887 FN522-S Single Base Substitution G-T INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3890-S.SNP.9:11741780 chr09:011741780 0 W/11741780-11741780 FN3890-S SNP C -> T AC=1;AN=158;BQB=0.997751;DP=2484;DP4=1210,1178,12,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.76554e-12;MQSB=0.952624;RPB=0.445848;SGB=90.7616;VDB=0.061681;EFF=INTERGENIC(MODIFIER||||||||||1) FN713-S.SNP.9:11750154 chr09:011750154 0 W/11750154-11750154 FN713-S Single Base Substitution T-C INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1030-S.SNP.9:11756376 chr09:011756376 0 W/11756376-11756376 FN1030-S Single Base Substitution G-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN1030-S.SNP.9:11756379 chr09:011756379 0 W/11756379-11756379 FN1030-S Single Base Substitution G-A INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN3570-S.SNP.9:11760160 chr09:011760160 0 W/11760160-11760160 FN3570-S SNP T -> C AC=1;AN=190;BQB=0.99964;DP=3268;DP4=1708,1383,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.13596e-08;MQSB=0.877895;RPB=0.73697;SGB=62.7569;VDB=0.414899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.9:11762882 chr09:011762882 0 W/11762882-11762882 FN2408 SNP A -> T AC=1;AN=200;BQB=0.975416;DP=5138;DP4=2433,2427,3,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.40858e-05;MQSB=0.0139856;RPB=0.110605;SGB=25.849;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.9:11764175 chr09:011764175 0 W/11764175-11764175 FN837-S Single Base Substitution A-G INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3713-S.SNP.9:11765896 chr09:011765896 0 W/11765896-11765896 FN3713-S SNP A -> T AC=1;AN=190;BQB=0.940264;DP=2935;DP4=1198,1260,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0;MQB=9.25726e-06;MQSB=0.104224;RPB=0.862406;SGB=53.6492;VDB=0.079596;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.9:11786831 chr09:011786831 0 W/11786831-11786831 FN961-S Single Base Substitution T-C INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1036-S.SNP.9:11789543 chr09:011789543 0 W/11789543-11789543 FN1036-S Single Base Substitution A-T INTRON HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN-248.SNP.9:11790680 chr09:011790680 0 W/11790680-11790680 FN-248 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g19700 protein kinase domain containing protein, expressed SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN709-S.SNP.9:11792668 chr09:011792668 0 W/11792668-11792668 FN709-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g19700 protein kinase domain containing protein, expressed SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN709-S.SNP.9:11792669 chr09:011792669 0 W/11792669-11792669 FN709-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g19700 protein kinase domain containing protein, expressed SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN1240-S.SNP.9:11800743 chr09:011800743 0 W/11800743-11800743 FN1240-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1057-S.SNP.9:11823697 chr09:011823697 0 W/11823697-11823697 FN1057-S Single Base Substitution A-G INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1401-S.SNP.9:11826843 chr09:011826843 0 W/11826843-11826843 FN1401-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN460-S.SNP.9:11827513 chr09:011827513 0 W/11827513-11827513 FN460-S Single Base Substitution G-A INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2617-S.SNP.9:11827579 chr09:011827579 0 W/11827579-11827579 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.845459;DP=3736;DP4=1675,1745,19,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.5588e-22;MQSB=0.996021;RPB=0.230679;SGB=164.427;VDB=0.229118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.9:11827580 chr09:011827580 0 W/11827580-11827580 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.964208;DP=3720;DP4=1701,1714,18,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.94689e-22;MQSB=0.956036;RPB=0.386213;SGB=164.427;VDB=0.251195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.9:11827584 chr09:011827584 0 W/11827584-11827584 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.444722;DP=3668;DP4=1569,1696,20,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.79722e-23;MQSB=0.982292;RPB=0.0810279;SGB=169.022;VDB=0.3782;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.9:11830629 chr09:011830629 0 W/11830629-11830629 W577-3-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2536-S.SNP.9:11839845 chr09:011839845 0 W/11839845-11839845 FN2536-S SNP G -> A AC=2;AN=198;BQB=0.2416;DP=3981;DP4=1922,1776,14,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.70575e-10;MQSB=0.99447;RPB=0.885651;SGB=39.7248;VDB=0.59569;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.9:11839845 chr09:011839845 0 W/11839845-11839845 FN4117-S SNP G -> A AC=2;AN=182;BQB=0.831623;DP=2909;DP4=1542,1277,14,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=7.14687e-12;MQSB=0.900538;RPB=0.32639;SGB=70.7363;VDB=0.549098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.9:11844025 chr09:011844025 0 W/11844025-11844025 FN2118-S SNP C -> A AC=1;AN=168;BQB=0.367901;DP=2320;DP4=1156,1101,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.79608e-07;MQSB=0.472194;RPB=0.983047;SGB=-38.3665;VDB=0.876741;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A67D|878|LOC_Os09g19790|protein_coding|CODING|LOC_Os09g19790.1|1|1) FN2118-S.SNP.9:11844026 chr09:011844026 0 W/11844026-11844026 FN2118-S SNP C -> A AC=1;AN=168;BQB=0.853489;DP=2324;DP4=1162,1100,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.24805e-07;MQSB=0.450153;RPB=0.589708;SGB=5.62151;VDB=0.908107;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A67|878|LOC_Os09g19790|protein_coding|CODING|LOC_Os09g19790.1|1|1) FN751-S.SNP.9:11864800 chr09:011864800 0 W/11864800-11864800 FN751-S Single Base Substitution G-A INTRON HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN-344.SNP.9:11872926 chr09:011872926 0 W/11872926-11872926 FN-344 Single Base Substitution A-G INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2697-S.SNP.9:11875435 chr09:011875435 0 W/11875435-11875435 FN2697-S SNP A -> G AC=1;AN=200;BQB=0.876503;DP=4839;DP4=2151,2339,12,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.9748e-06;MQSB=1.88669e-05;RPB=0.311273;SGB=69.1109;VDB=0.652422;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.9:11875681 chr09:011875681 0 W/11875681-11875681 FN4325-S SNP A -> C AC=1;AN=170;BQB=0.941712;DP=2426;DP4=1258,1053,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.19109e-08;MQSB=0.81495;RPB=0.842616;SGB=27.2119;VDB=0.190035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.9:11877286 chr09:011877286 0 W/11877286-11877286 FN1009-S Single Base Substitution T-C INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN584-S.SNP.9:11886350 chr09:011886350 0 W/11886350-11886350 FN584-S Single Base Substitution G-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2614-S.SNP.9:11887897 chr09:011887897 0 W/11887897-11887897 FN2614-S SNP G -> C AC=1;AN=198;BQB=0.998262;DP=4117;DP4=1829,2135,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0153024;MQB=7.10497e-05;MQSB=0.685909;RPB=0.0124376;SGB=42.3199;VDB=0.0916876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tCc|C413S|729|LOC_Os09g19860|protein_coding|CODING|LOC_Os09g19860.1|1|1) FN1263-S.SNP.9:11890809 chr09:011890809 0 W/11890809-11890809 FN1263-S Single Base Substitution G-C INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN4229-S.SNP.9:11906212 chr09:011906212 0 W/11906212-11906212 FN4229-S SNP G -> A AC=2;AN=170;BQB=0.612414;DP=2649;DP4=1265,1281,10,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.64949e-11;MQSB=0.743149;RPB=0.697582;SGB=69.3045;VDB=0.429293;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T191|463|LOC_Os09g19890|protein_coding|CODING|LOC_Os09g19890.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T191|463|LOC_Os09g19890|protein_coding|CODING|LOC_Os09g19890.2|2|1) FN-137.SNP.9:11930005 chr09:011930005 0 W/11930005-11930005 FN-137 Single Base Substitution T-G INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2126-S.SNP.9:11932394 chr09:011932394 0 W/11932394-11932394 FN2126-S SNP C -> T AC=1;AN=168;BQB=0.135429;DP=4144;DP4=2134,1959,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.25e-12;MQSB=0.997577;RPB=0.670264;SGB=-144.333;VDB=0.249739;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.9:11936513 chr09:011936513 0 W/11936513-11936513 FN452-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g19940 cwfJ-like family protein, putative, expressed SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN569-S.SNP.9:11941779 chr09:011941779 0 W/11941779-11941779 FN569-S Single Base Substitution C-T INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN-252.SNP.9:11942864 chr09:011942864 0 W/11942864-11942864 FN-252 Single Base Substitution C-G INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN447-S.SNP.9:11948590 chr09:011948590 0 W/11948590-11948590 FN447-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN944-S.SNP.9:11952027 chr09:011952027 0 W/11952027-11952027 FN944-S Single Base Substitution G-A INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1749-S.SNP.9:11953749 chr09:011953749 0 W/11953749-11953749 FN1749-S SNP A -> C AC=1;AN=188;BQB=0.0945763;DP=4061;DP4=1952,2065,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.47756e-10;MQSB=0.951034;RPB=0.926891;SGB=-38.7347;VDB=0.0703833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.9:11953996 chr09:011953996 0 W/11953996-11953996 FN1536-S Single Base Substitution A-T INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN3383-S.SNP.9:11955794 chr09:011955794 0 W/11955794-11955794 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.999789;DP=3045;DP4=1487,1459,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.31478e-08;MQSB=0.999929;RPB=0.841524;SGB=20.7533;VDB=0.386171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.9:11956712 chr09:011956712 0 W/11956712-11956712 FN2774-S SNP A -> T AC=2;AN=198;BQB=0.816502;DP=3455;DP4=1603,1244,18,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.3593e-21;MQSB=0.12484;RPB=0.0852368;SGB=117.637;VDB=0.0313852;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R214W|267|LOC_Os09g19970|protein_coding|CODING|LOC_Os09g19970.1|1|1) FN485-S.SNP.9:11963454 chr09:011963454 0 W/11963454-11963454 FN485-S Single Base Substitution C-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3312-S.SNP.9:11964566 chr09:011964566 0 W/11964566-11964566 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.666778;DP=3367;DP4=1486,1737,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.01309e-07;MQSB=0.993584;RPB=0.97379;SGB=46.3132;VDB=0.915056;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.9:11972150 chr09:011972150 0 W/11972150-11972150 FN1135-S Single Base Substitution G-A INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN2372.SNP.9:11974091 chr09:011974091 0 W/11974091-11974091 FN2372 SNP A -> T AC=2;AN=192;BQB=0.719461;DP=5042;DP4=2489,2180,24,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.75475e-33;MQSB=0.986542;RPB=0.942346;SGB=77.7505;VDB=0.840957;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.9:11977567 chr09:011977567 0 W/11977567-11977567 FN1480-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g20000 heavy metal-associated domain containing protein, expressed SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN769-S.SNP.9:11977751 chr09:011977751 0 W/11977751-11977751 FN769-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3412-S.SNP.9:11984476 chr09:011984476 0 W/11984476-11984476 FN3412-S SNP A -> T AC=2;AN=184;BQB=0.930421;DP=2437;DP4=1203,1076,7,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.11542e-14;MQSB=0.916161;RPB=0.810626;SGB=89.4385;VDB=0.178799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3412-S.SNP.9:11984477 chr09:011984477 0 W/11984477-11984477 FN3412-S SNP A -> T AC=2;AN=184;BQB=0.778577;DP=2430;DP4=1222,1086,8,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.27275e-14;MQSB=0.976468;RPB=0.918439;SGB=93.9603;VDB=0.155754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.9:11985556 chr09:011985556 0 W/11985556-11985556 FN1112-S Single Base Substitution C-T INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3325-S.SNP.9:11994910 chr09:011994910 0 W/11994910-11994910 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.778614;DP=2688;DP4=1294,1299,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17297e-05;MQSB=0.69954;RPB=0.524538;SGB=32.2261;VDB=0.784132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.9:11994993 chr09:011994993 0 W/11994993-11994993 FN3804-S SNP G -> T AC=1;AN=190;BQB=0.856504;DP=2720;DP4=1229,1377,8,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.4661e-16;MQSB=0.834785;RPB=0.587131;SGB=131.065;VDB=0.134995;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.9:11997062 chr09:011997062 0 W/11997062-11997062 FN4166-S SNP A -> G AC=2;AN=170;BQB=0.89449;DP=2550;DP4=1160,1280,5,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.72654e-08;MQSB=0.892784;RPB=0.941568;SGB=70.0854;VDB=0.91703;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.9:11997854 chr09:011997854 0 W/11997854-11997854 FN902-S Single Base Substitution C-T INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2493.SNP.9:12004423 chr09:012004423 0 W/12004423-12004423 FN2493 SNP C -> T AC=1;AN=200;BQB=0.812571;DP=4077;DP4=1862,1936,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.96296e-14;MQSB=0.515789;RPB=0.764465;SGB=50.3263;VDB=0.47348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A2V|1273|LOC_Os09g20040|protein_coding|CODING|LOC_Os09g20040.1|1|1) FN702-S.SNP.9:12006115 chr09:012006115 0 W/12006115-12006115 FN702-S Single Base Substitution T-A INTRON HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2397.SNP.9:12006475 chr09:012006475 0 W/12006475-12006475 FN2397 SNP G -> A AC=1;AN=200;BQB=0.116519;DP=4571;DP4=2315,1934,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218771;MQB=1.16874e-05;MQSB=0.74593;RPB=0.166168;SGB=-34.1311;VDB=0.408117;EFF=INTRON(MODIFIER||||1273|LOC_Os09g20040|protein_coding|CODING|LOC_Os09g20040.1|4|1) FN2212-S.SNP.9:12007749 chr09:012007749 0 W/12007749-12007749 FN2212-S SNP C -> G AC=1;AN=190;BQB=0.0935901;DP=5038;DP4=2191,2380,20,29;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34837e-27;MQSB=0.381189;RPB=0.946119;SGB=164.04;VDB=0.57227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A342G|1273|LOC_Os09g20040|protein_coding|CODING|LOC_Os09g20040.1|5|1) FN3325-S.SNP.9:12008396 chr09:012008396 0 W/12008396-12008396 FN3325-S SNP G -> C AC=1;AN=184;BQB=0.984876;DP=2750;DP4=1420,1233,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.90434e-11;MQSB=0.887185;RPB=0.308713;SGB=56.8786;VDB=0.013137;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Cat|D558H|1273|LOC_Os09g20040|protein_coding|CODING|LOC_Os09g20040.1|5|1) FN2685-S.SNP.9:12017827 chr09:012017827 0 W/12017827-12017827 FN2685-S SNP A -> T AC=2;AN=200;BQB=0.365441;DP=4199;DP4=1721,2099,10,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.895e-13;MQSB=0.936406;RPB=0.980218;SGB=72.7161;VDB=0.86819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D181V|309|LOC_Os09g20050|protein_coding|CODING|LOC_Os09g20050.1|2|1) FN1009-S.SNP.9:12022543 chr09:012022543 0 W/12022543-12022543 FN1009-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN-235.SNP.9:12025861 chr09:012025861 0 W/12025861-12025861 FN-235 Single Base Substitution T-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3665-S.SNP.9:12026143 chr09:012026143 0 W/12026143-12026143 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.843747;DP=2255;DP4=1458,685,18,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000443459;MQB=5.14683e-12;MQSB=0.990815;RPB=0.992372;SGB=94.6341;VDB=0.398936;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.9:12027253 chr09:012027253 0 W/12027253-12027253 FN863-S Single Base Substitution C-T INTRON HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2461.SNP.9:12036449 chr09:012036449 0 W/12036449-12036449 FN2461 SNP G -> T AC=1;AN=200;BQB=0.933396;DP=4768;DP4=2410,2107,8,4;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.01396e-08;MQSB=0.753529;RPB=0.991387;SGB=49.6594;VDB=0.106561;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.9:12042302 chr09:012042302 0 W/12042302-12042302 FN429-S Single Base Substitution A-G INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3310-S.SNP.9:12043411 chr09:012043411 0 W/12043411-12043411 FN3310-S SNP A -> G AC=1;AN=184;BQB=0.985807;DP=2816;DP4=1428,1320,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30446e-06;MQSB=0.980949;RPB=0.616202;SGB=25.1826;VDB=0.0413417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.9:12049711 chr09:012049711 0 W/12049711-12049711 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.545322;DP=4805;DP4=2572,1994,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41918e-10;MQSB=0.894458;RPB=0.129977;SGB=47.4799;VDB=0.385075;EFF=INTRON(MODIFIER||||219|LOC_Os09g20110|protein_coding|CODING|LOC_Os09g20110.1|2|1) FN3982-S.SNP.9:12055327 chr09:012055327 0 W/12055327-12055327 FN3982-S SNP A -> C AC=1;AN=168;BQB=0.999397;DP=2448;DP4=1135,1191,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0134804;MQB=7.20016e-07;MQSB=0.258102;RPB=0.729353;SGB=48.4712;VDB=0.713888;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctC|L369|1073|LOC_Os09g20120|protein_coding|CODING|LOC_Os09g20120.1|4|1) FN3446-S.SNP.9:12057072 chr09:012057072 0 W/12057072-12057072 FN3446-S SNP T -> C AC=1;AN=184;BQB=0.960821;DP=2871;DP4=1229,1484,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00592128;MQB=0.000979804;MQSB=0.253644;RPB=0.960647;SGB=21.6609;VDB=0.326267;EFF=INTRON(MODIFIER||||1073|LOC_Os09g20120|protein_coding|CODING|LOC_Os09g20120.1|5|1) FN2123-S.SNP.9:12057349 chr09:012057349 0 W/12057349-12057349 FN2123-S SNP C -> T AC=1;AN=168;BQB=0.0468584;DP=2780;DP4=1117,1620,16,13;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00791367;MQB=9.09463e-07;MQSB=0.983162;RPB=0.0509135;SGB=-10.6335;VDB=0.771953;EFF=INTRON(MODIFIER||||1073|LOC_Os09g20120|protein_coding|CODING|LOC_Os09g20120.1|5|1) FN901-S.SNP.9:12057989 chr09:012057989 0 W/12057989-12057989 FN901-S Single Base Substitution C-T INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1151-S.SNP.9:12058241 chr09:012058241 0 W/12058241-12058241 FN1151-S Single Base Substitution C-T INTRON HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-101.SNP.9:12058290 chr09:012058290 0 W/12058290-12058290 FN-101 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g20120 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-235.SNP.9:12069378 chr09:012069378 0 W/12069378-12069378 FN-235 Single Base Substitution G-T INTRON HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-235.SNP.9:12069379 chr09:012069379 0 W/12069379-12069379 FN-235 Single Base Substitution A-T INTRON HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2109-S.SNP.9:12073781 chr09:012073781 0 W/12073781-12073781 FN2109-S SNP T -> C AC=1;AN=168;BQB=0.824555;DP=3584;DP4=1858,1693,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000837054;MQB=5.33591e-08;MQSB=0.829243;RPB=0.882666;SGB=4.1907;VDB=0.310738;EFF=INTRON(MODIFIER||||435|LOC_Os09g20160|protein_coding|CODING|LOC_Os09g20160.1|5|1) FN1575-S.SNP.9:12079768 chr09:012079768 0 W/12079768-12079768 FN1575-S Single Base Substitution C-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN-247.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN-247 Single Base Substitution T-C INTRON HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-312.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN-312 Single Base Substitution T-C INTRON HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1048-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1048-S Single Base Substitution T-C INTRON HOMO SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN1204-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1204-S Single Base Substitution T-C INTRON HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1297-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1297-S Single Base Substitution T-C INTRON HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1484-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1484-S Single Base Substitution T-C INTRON HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1520-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1520-S Single Base Substitution T-C INTRON Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1566-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN1566-S Single Base Substitution T-C INTRON Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2201-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN2201-S SNP T -> C AC=2;AN=190;BQB=0.841899;DP=4835;DP4=2300,2125,23,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.83428e-28;MQSB=0.446708;RPB=0.358927;SGB=120.707;VDB=0.873082;EFF=INTRON(MODIFIER||||272|LOC_Os09g20170|protein_coding|CODING|LOC_Os09g20170.1|1|1) FN3358-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.977246;DP=3418;DP4=1365,1882,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77589e-12;MQSB=0.362566;RPB=0.625156;SGB=17.4548;VDB=0.531281;EFF=INTRON(MODIFIER||||272|LOC_Os09g20170|protein_coding|CODING|LOC_Os09g20170.1|1|1) FN3613-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN3613-S SNP T -> C AC=2;AN=190;BQB=0.849772;DP=2798;DP4=1271,1357,15,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.91439e-21;MQSB=0.56527;RPB=0.53496;SGB=176.604;VDB=0.405991;EFF=INTRON(MODIFIER||||272|LOC_Os09g20170|protein_coding|CODING|LOC_Os09g20170.1|1|1) FN369-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN369-S Single Base Substitution T-C INTRON HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3806-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN3806-S SNP T -> C AC=2;AN=190;BQB=0.999748;DP=2994;DP4=1224,1614,11,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.74169e-15;MQSB=0.882837;RPB=0.676313;SGB=117.403;VDB=0.710911;EFF=INTRON(MODIFIER||||272|LOC_Os09g20170|protein_coding|CODING|LOC_Os09g20170.1|1|1) FN469-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN469-S Single Base Substitution T-C INTRON HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN632-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN632-S Single Base Substitution T-C INTRON HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN908-S.SNP.9:12081052 chr09:012081052 0 W/12081052-12081052 FN908-S Single Base Substitution T-C INTRON HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1682-S.SNP.9:12084427 chr09:012084427 0 W/12084427-12084427 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.213096;DP=3091;DP4=1096,1941,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8372e-10;MQSB=0.861845;RPB=0.682886;SGB=19.4279;VDB=0.0555125;EFF=INTERGENIC(MODIFIER||||||||||1) FN_798-4-2.SNP.9:12089445 chr09:012089445 0 W/12089445-12089445 FN_798-4-2 Single Base Substitution G-T HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN-180.SNP.9:12090773 chr09:012090773 0 W/12090773-12090773 FN-180 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g20180 expressed protein SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN2791-S.SNP.9:12090953 chr09:012090953 0 W/12090953-12090953 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.871679;DP=4396;DP4=2261,1893,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00022748;MQB=3.46445e-07;MQSB=0.0221409;RPB=0.953298;SGB=81.7147;VDB=0.523375;EFF=INTRON(MODIFIER||||283|LOC_Os09g20180|protein_coding|CODING|LOC_Os09g20180.1|2|1) FN-235.SNP.9:12096901 chr09:012096901 0 W/12096901-12096901 FN-235 Single Base Substitution T-A INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3467-S.SNP.9:12099047 chr09:012099047 0 W/12099047-12099047 FN3467-S SNP G -> A AC=1;AN=184;BQB=0.944732;DP=3205;DP4=1607,1501,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81899e-10;MQSB=0.977738;RPB=0.615128;SGB=53.3568;VDB=0.889876;EFF=INTERGENIC(MODIFIER||||||||||1) FN3942-S.SNP.9:12102867 chr09:012102867 0 W/12102867-12102867 FN3942-S SNP C -> T AC=1;AN=168;BQB=0.784463;DP=2412;DP4=881,1402,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.44864e-09;MQSB=1.72201e-06;RPB=0.934614;SGB=62.1945;VDB=0.459144;EFF=INTRON(MODIFIER||||285|LOC_Os09g20190|protein_coding|CODING|LOC_Os09g20190.1|2|1) FN3370-S.SNP.9:12111779 chr09:012111779 0 W/12111779-12111779 FN3370-S SNP A -> T AC=1;AN=184;BQB=0.99512;DP=2604;DP4=1294,1220,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22565e-06;MQSB=0.823454;RPB=0.422049;SGB=25.1826;VDB=0.297266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.9:12116076 chr09:012116076 0 W/12116076-12116076 FN3880-S SNP A -> T AC=1;AN=158;BQB=0.997982;DP=1796;DP4=787,885,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000628795;MQSB=0.835545;RPB=0.455146;SGB=29.5899;VDB=0.883613;EFF=INTERGENIC(MODIFIER||||||||||1) W674-4-1.SNP.9:12138799 chr09:012138799 0 W/12138799-12138799 W674-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3558-S.SNP.9:12145115 chr09:012145115 0 W/12145115-12145115 FN3558-S SNP G -> A AC=2;AN=188;BQB=0.952234;DP=2517;DP4=1034,1399,15,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.57349e-18;MQSB=0.948116;RPB=0.95682;SGB=135.302;VDB=0.873999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.9:12152297 chr09:012152297 0 W/12152297-12152297 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.578497;DP=4451;DP4=2335,1881,24,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.41952e-18;MQSB=0.845496;RPB=0.304058;SGB=97.671;VDB=0.233545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.9:12152945 chr09:012152945 0 W/12152945-12152945 FN1283-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1162-S.SNP.9:12153104 chr09:012153104 0 W/12153104-12153104 FN1162-S Single Base Substitution C-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN-104.SNP.9:12153639 chr09:012153639 0 W/12153639-12153639 FN-104 Single Base Substitution C-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-104.SNP.9:12153641 chr09:012153641 0 W/12153641-12153641 FN-104 Single Base Substitution C-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-104.SNP.9:12153642 chr09:012153642 0 W/12153642-12153642 FN-104 Single Base Substitution C-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1528-S.SNP.9:12160655 chr09:012160655 0 W/12160655-12160655 FN1528-S Single Base Substitution C-T INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3738-S.SNP.9:12162175 chr09:012162175 0 W/12162175-12162175 FN3738-S SNP C -> A AC=1;AN=190;BQB=0.999989;DP=1497;DP4=794,621,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.012024;MQB=0.387241;MQSB=5.2453e-13;RPB=0.104177;SGB=30.8803;VDB=0.00653337;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N2-29a-1.SNP.9:12162636 chr09:012162636 0 W/12162636-12162636 FN_N2-29a-1 Single Base Substitution C-T HET SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN4011-S.SNP.9:12162665 chr09:012162665 0 W/12162665-12162665 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.657914;DP=2224;DP4=1413,724,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.2028e-06;MQSB=0.000113767;RPB=0.793172;SGB=24.6155;VDB=0.114111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.9:12168681 chr09:012168681 0 W/12168681-12168681 FN3429-S SNP G -> A AC=2;AN=184;BQB=0.837516;DP=2960;DP4=1417,1443,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.1536e-08;MQSB=0.926944;RPB=0.997948;SGB=42.7914;VDB=0.807685;EFF=INTRON(MODIFIER||||478|LOC_Os09g20284|protein_coding|CODING|LOC_Os09g20284.1|3|1) FN944-S.SNP.9:12168854 chr09:012168854 0 W/12168854-12168854 FN944-S Single Base Substitution T-A INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2232-S.SNP.9:12178239 chr09:012178239 0 W/12178239-12178239 FN2232-S SNP A -> C AC=1;AN=190;BQB=0.857328;DP=3949;DP4=1537,2062,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000253229;MQB=3.17925e-09;MQSB=0.593487;RPB=0.808181;SGB=14.9883;VDB=0.926774;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.9:12180266 chr09:012180266 0 W/12180266-12180266 FN2124-S SNP G -> A AC=1;AN=168;BQB=0.539302;DP=3611;DP4=1787,1779,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.10153e-10;MQSB=0.871488;RPB=0.93503;SGB=12.7756;VDB=0.35215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M228I|260|LOC_Os09g20300|protein_coding|CODING|LOC_Os09g20300.1|3|1) FN1413-S.SNP.9:12184436 chr09:012184436 0 W/12184436-12184436 FN1413-S Single Base Substitution G-A INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2447.SNP.9:12189637 chr09:012189637 0 W/12189637-12189637 FN2447 SNP C -> T AC=1;AN=200;BQB=0.982435;DP=4032;DP4=1798,1938,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8849e-08;MQSB=0.998857;RPB=0.970944;SGB=47.4799;VDB=0.521675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.9:12192459 chr09:012192459 0 W/12192459-12192459 FN2686-S SNP T -> C AC=2;AN=200;BQB=0.976616;DP=4604;DP4=2470,1906,10,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.7646e-17;MQSB=0.975853;RPB=0.284394;SGB=55.5366;VDB=0.524559;EFF=INTRON(MODIFIER||||329|LOC_Os09g20320|protein_coding|CODING|LOC_Os09g20320.1|3|1) FN3473-S.SNP.9:12196932 chr09:012196932 0 W/12196932-12196932 FN3473-S SNP C -> G AC=1;AN=184;BQB=0.896261;DP=3245;DP4=1502,1658,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.95333e-08;MQSB=0.979975;RPB=0.881205;SGB=48.7425;VDB=0.236946;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V139|363|LOC_Os09g20330|protein_coding|CODING|LOC_Os09g20330.1|3|1) FN660-S.SNP.9:12204795 chr09:012204795 0 W/12204795-12204795 FN660-S Single Base Substitution T-C INTRON HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN3732-S.SNP.9:12209169 chr09:012209169 0 W/12209169-12209169 FN3732-S SNP G -> T AC=1;AN=190;BQB=0.967572;DP=3103;DP4=1609,1381,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00158564;MQSB=0.00678792;RPB=0.868556;SGB=35.4339;VDB=0.996663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1713-S.SNP.9:12211579 chr09:012211579 0 W/12211579-12211579 FN1713-S SNP G -> C AC=1;AN=188;BQB=0.263786;DP=3128;DP4=1706,1384,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.5631e-08;MQSB=0.852763;RPB=0.0881706;SGB=-14.9998;VDB=0.322835;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.9:12211837 chr09:012211837 0 W/12211837-12211837 W463-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN4066-S.SNP.9:12213769 chr09:012213769 0 W/12213769-12213769 FN4066-S SNP C -> T AC=1;AN=168;BQB=0.975119;DP=2646;DP4=1361,1200,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91987e-07;MQSB=0.944964;RPB=0.41745;SGB=34.748;VDB=0.131193;EFF=INTERGENIC(MODIFIER||||||||||1) FN-359.SNP.9:12219737 chr09:012219737 0 W/12219737-12219737 FN-359 Single Base Substitution G-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN-359.SNP.9:12219738 chr09:012219738 0 W/12219738-12219738 FN-359 Single Base Substitution C-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN351-S.SNP.9:12220716 chr09:012220716 0 W/12220716-12220716 FN351-S Single Base Substitution G-T INTRON HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2107-S.SNP.9:12230576 chr09:012230576 0 W/12230576-12230576 FN2107-S SNP A -> T AC=2;AN=168;BQB=0.319682;DP=3708;DP4=1957,1689,29,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.03242e-19;MQSB=0.912946;RPB=0.994528;SGB=49.9768;VDB=0.445257;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.9:12231184 chr09:012231184 0 W/12231184-12231184 FN2653-S SNP A -> T AC=1;AN=200;BQB=0.932052;DP=5089;DP4=2544,2350,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87071e-14;MQSB=0.718373;RPB=0.746387;SGB=72.7161;VDB=0.693495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.9:12234193 chr09:012234193 0 W/12234193-12234193 FN1175-S Single Base Substitution T-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4022-S.SNP.9:12246969 chr09:012246969 0 W/12246969-12246969 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.996677;DP=2847;DP4=1450,1223,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.31378e-06;MQSB=0.118956;RPB=0.150814;SGB=10.0307;VDB=0.453493;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.9:12247475 chr09:012247475 0 W/12247475-12247475 FN1239-S Single Base Substitution C-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1371-S.SNP.9:12249261 chr09:012249261 0 W/12249261-12249261 FN1371-S Single Base Substitution A-G INTERGENIC Homo SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2721-S.SNP.9:12250913 chr09:012250913 0 W/12250913-12250913 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.424636;DP=4029;DP4=1732,2051,11,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.78357e-07;MQSB=0.493691;RPB=0.818862;SGB=14.3054;VDB=0.394029;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.9:12254133 chr09:012254133 0 W/12254133-12254133 FN810-S Single Base Substitution C-A INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2180-S.SNP.9:12254472 chr09:012254472 0 W/12254472-12254472 FN2180-S SNP T -> G AC=1;AN=190;BQB=0.661951;DP=4470;DP4=2300,1685,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000671141;MQB=3.26698e-11;MQSB=0.0261971;RPB=0.879716;SGB=44.0907;VDB=0.694395;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.9:12256168 chr09:012256168 0 W/12256168-12256168 FN-150 Single Base Substitution A-G INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2485.SNP.9:12264738 chr09:012264738 0 W/12264738-12264738 FN2485 SNP T -> C AC=1;AN=200;BQB=0.467423;DP=4375;DP4=2053,1960,5,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.04153e-06;MQSB=0.0252417;RPB=0.998637;SGB=47.4799;VDB=0.886326;EFF=INTRON(MODIFIER||||397|LOC_Os09g20400|protein_coding|CODING|LOC_Os09g20400.1|2|1) FN2657-S.SNP.9:12265040 chr09:012265040 0 W/12265040-12265040 FN2657-S SNP T -> A AC=1;AN=200;BQB=0.987827;DP=4488;DP4=1991,2206,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87887e-11;MQSB=0.738309;RPB=0.0822246;SGB=81.8956;VDB=0.953135;EFF=INTRON(MODIFIER||||397|LOC_Os09g20400|protein_coding|CODING|LOC_Os09g20400.1|2|1) FN684-S.SNP.9:12265310 chr09:012265310 0 W/12265310-12265310 FN684-S Single Base Substitution G-C INTRON HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN4165-S.SNP.9:12271308 chr09:012271308 0 W/12271308-12271308 FN4165-S SNP A -> T AC=1;AN=170;BQB=0.930831;DP=2613;DP4=1407,1069,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.67019e-10;MQSB=0.997691;RPB=0.931591;SGB=61.2001;VDB=0.989546;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.9:12271321 chr09:012271321 0 W/12271321-12271321 FN4165-S SNP A -> G AC=1;AN=170;BQB=0.775622;DP=2657;DP4=1452,1064,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.18722e-09;MQSB=0.997887;RPB=0.962707;SGB=52.3148;VDB=0.851622;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.9:12272587 chr09:012272587 0 W/12272587-12272587 FN2537-S SNP T -> G AC=1;AN=198;BQB=0.0486328;DP=4445;DP4=2233,1850,22,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28235e-14;MQSB=0.580548;RPB=0.861543;SGB=-73.8745;VDB=0.205019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.9:12275003 chr09:012275003 0 W/12275003-12275003 FN3551-S SNP A -> G AC=2;AN=188;BQB=0.651508;DP=2708;DP4=1279,1346,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.89333e-10;MQSB=0.945148;RPB=0.103913;SGB=38.7926;VDB=0.114454;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.9:12275003 chr09:012275003 0 W/12275003-12275003 FN4173-S SNP A -> G AC=2;AN=170;BQB=0.288793;DP=1432;DP4=475,910,4,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.93711e-06;MQSB=0.602959;RPB=0.294292;SGB=43.4296;VDB=0.148379;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.9:12275003 chr09:012275003 0 W/12275003-12275003 FN937-S Single Base Substitution A-G INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN520-S.SNP.9:12275908 chr09:012275908 0 W/12275908-12275908 FN520-S Single Base Substitution C-G INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN509-S.SNP.9:12286177 chr09:012286177 0 W/12286177-12286177 FN509-S Single Base Substitution G-A INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN509-S.SNP.9:12286179 chr09:012286179 0 W/12286179-12286179 FN509-S Single Base Substitution G-A INTERGENIC HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3517-S.SNP.9:12289512 chr09:012289512 0 W/12289512-12289512 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.884782;DP=3571;DP4=1551,1890,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.50012e-07;MQSB=0.721424;RPB=0.950517;SGB=23.5329;VDB=0.612796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.9:12289794 chr09:012289794 0 W/12289794-12289794 FN2380 SNP C -> T AC=1;AN=192;BQB=0.794758;DP=5252;DP4=2634,2242,22,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.5311e-16;MQSB=0.875554;RPB=0.0918462;SGB=-6.30345;VDB=0.437702;EFF=UTR_3_PRIME(MODIFIER||1183||284|LOC_Os09g20430|protein_coding|CODING|LOC_Os09g20430.1|8|1) FN-146.SNP.9:12291974 chr09:012291974 0 W/12291974-12291974 FN-146 Single Base Substitution A-C INTRON HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-136.SNP.9:12298494 chr09:012298494 0 W/12298494-12298494 FN-136 Single Base Substitution T-G INTERGENIC HOMO SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN735-S.SNP.9:12302775 chr09:012302775 0 W/12302775-12302775 FN735-S Single Base Substitution A-G INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2278-S.SNP.9:12304089 chr09:012304089 0 W/12304089-12304089 FN2278-S SNP G -> C AC=1;AN=190;BQB=0.821665;DP=4849;DP4=2183,2317,19,30;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.38688e-29;MQSB=0.913488;RPB=0.230512;SGB=56.9429;VDB=0.0674611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.9:12307509 chr09:012307509 0 W/12307509-12307509 FN3430-S SNP G -> T AC=1;AN=184;BQB=0.617981;DP=2129;DP4=1141,804,19,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.37137e-09;MQSB=0.000722788;RPB=0.773203;SGB=45.9712;VDB=0.529874;EFF=INTRON(MODIFIER||||639|LOC_Os09g20450|protein_coding|CODING|LOC_Os09g20450.1|2|1) FN3400-S.SNP.9:12319043 chr09:012319043 0 W/12319043-12319043 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.933454;DP=2181;DP4=1005,1021,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.34772e-05;MQSB=0.967769;RPB=0.870527;SGB=44.2207;VDB=0.966447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.9:12324772 chr09:012324772 0 W/12324772-12324772 FN3530-S SNP A -> G AC=1;AN=188;BQB=0.904219;DP=2775;DP4=1276,1343,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.59367e-12;MQSB=0.999611;RPB=0.988417;SGB=16.3413;VDB=0.127556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.9:12327031 chr09:012327031 0 W/12327031-12327031 FN2372 SNP C -> T AC=2;AN=192;BQB=0.282444;DP=4074;DP4=1668,1988,26,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.8013e-21;MQSB=0.00507417;RPB=0.857658;SGB=100.716;VDB=0.129096;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.9:12334863 chr09:012334863 0 W/12334863-12334863 FN445-S Single Base Substitution C-T INTERGENIC HOMO SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN908-S.SNP.9:12339375 chr09:012339375 0 W/12339375-12339375 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2082-S.SNP.9:12349152 chr09:012349152 0 W/12349152-12349152 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.530055;DP=3007;DP4=1388,1572,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.81011e-10;MQSB=0.978604;RPB=0.187125;SGB=14.2064;VDB=0.160663;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L432|520|LOC_Os09g20480|protein_coding|CODING|LOC_Os09g20480.1|3|1) FN3330-S.SNP.9:12355924 chr09:012355924 0 W/12355924-12355924 FN3330-S SNP G -> A AC=1;AN=184;BQB=0.187849;DP=2432;DP4=1227,1128,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97088e-07;MQSB=0.86901;RPB=0.199537;SGB=39.2697;VDB=0.37956;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E32|516|LOC_Os09g20490|protein_coding|CODING|LOC_Os09g20490.1|1|1) FN594-S.SNP.9:12356137 chr09:012356137 0 W/12356137-12356137 FN594-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2313.SNP.9:12359200 chr09:012359200 0 W/12359200-12359200 FN2313 SNP G -> T AC=1;AN=192;BQB=0.993921;DP=4862;DP4=1863,2459,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.34539e-14;MQSB=0.961492;RPB=0.313702;SGB=-73.1147;VDB=0.697209;EFF=UTR_3_PRIME(MODIFIER||217||516|LOC_Os09g20490|protein_coding|CODING|LOC_Os09g20490.1|3|1) FN2758-S.SNP.9:12376820 chr09:012376820 0 W/12376820-12376820 FN2758-S SNP G -> T AC=1;AN=200;BQB=0.939309;DP=5076;DP4=2397,2348,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.59514e-09;MQSB=0.587266;RPB=0.842099;SGB=58.8698;VDB=0.850759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.9:12381286 chr09:012381286 0 W/12381286-12381286 FN2484 SNP C -> T AC=1;AN=200;BQB=0.523139;DP=3448;DP4=1067,2148,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.50424e-10;MQSB=0.965844;RPB=0.880264;SGB=77.2904;VDB=0.99782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.9:12383773 chr09:012383773 0 W/12383773-12383773 FN1151-S Single Base Substitution G-A INTRON HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2419.SNP.9:12386018 chr09:012386018 0 W/12386018-12386018 FN2419 SNP G -> A AC=1;AN=200;BQB=0.561556;DP=4621;DP4=2008,2377,11,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16952e-16;MQSB=0.991885;RPB=0.075404;SGB=141.763;VDB=0.808729;EFF=INTRON(MODIFIER||||657|LOC_Os09g20550|protein_coding|CODING|LOC_Os09g20550.1|1|1) FN3756-S.SNP.9:12392873 chr09:012392873 0 W/12392873-12392873 FN3756-S SNP A -> T AC=1;AN=190;BQB=0.98258;DP=2380;DP4=1081,1200,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.35196e-06;MQSB=0.911263;RPB=0.471636;SGB=44.5415;VDB=0.939949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.9:12393943 chr09:012393943 0 W/12393943-12393943 FN1372-S Single Base Substitution G-C INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1210-S.SNP.9:12396084 chr09:012396084 0 W/12396084-12396084 FN1210-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN2554-S.SNP.9:12397787 chr09:012397787 0 W/12397787-12397787 FN2554-S SNP G -> A AC=1;AN=198;BQB=0.41621;DP=4083;DP4=1594,2275,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.90298e-08;MQSB=0.928214;RPB=0.853869;SGB=50.9344;VDB=0.397502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.9:12403577 chr09:012403577 0 W/12403577-12403577 FN1060-S Single Base Substitution G-A INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN1060-S.SNP.9:12404585 chr09:012404585 0 W/12404585-12404585 FN1060-S Single Base Substitution A-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN-303.SNP.9:12407156 chr09:012407156 0 W/12407156-12407156 FN-303 Single Base Substitution C-A INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3829-S.SNP.9:12410230 chr09:012410230 0 W/12410230-12410230 FN3829-S SNP C -> T AC=1;AN=190;BQB=0.999333;DP=2554;DP4=1099,1377,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.14026e-09;MQSB=0.723513;RPB=0.930653;SGB=39.6545;VDB=0.839565;EFF=INTRON(MODIFIER||||427|LOC_Os09g20590|protein_coding|CODING|LOC_Os09g20590.1|5|1),INTRON(MODIFIER||||401|LOC_Os09g20590|protein_coding|CODING|LOC_Os09g20590.2|5|1) FN-32.SNP.9:12413265 chr09:012413265 0 W/12413265-12413265 FN-32 Single Base Substitution T-C UTR_3_PRIME Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN-126.SNP.9:12413891 chr09:012413891 0 W/12413891-12413891 FN-126 Single Base Substitution A-T INTERGENIC HOMO SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1547-S.SNP.9:12421838 chr09:012421838 0 W/12421838-12421838 FN1547-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN632-S.SNP.9:12422680 chr09:012422680 0 W/12422680-12422680 FN632-S Single Base Substitution T-A INTRON HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN_812-4-1.SNP.9:12434819 chr09:012434819 0 W/12434819-12434819 FN_812-4-1 Single Base Substitution T-G Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1329-S.SNP.9:12442284 chr09:012442284 0 W/12442284-12442284 FN1329-S Single Base Substitution G-A INTERGENIC HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN4030-S.SNP.9:12444838 chr09:012444838 0 W/12444838-12444838 FN4030-S SNP G -> T AC=1;AN=168;BQB=0.960723;DP=2903;DP4=1566,1234,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.19053e-06;MQSB=0.986528;RPB=0.940892;SGB=24.4556;VDB=0.450065;EFF=INTRON(MODIFIER||||107|LOC_Os09g20660|protein_coding|CODING|LOC_Os09g20660.1|2|1),INTRON(MODIFIER||||96|LOC_Os09g20660|protein_coding|CODING|LOC_Os09g20660.2|2|1),INTRON(MODIFIER||||81|LOC_Os09g20660|protein_coding|CODING|LOC_Os09g20660.3|2|1) FN3690-S.SNP.9:12460314 chr09:012460314 0 W/12460314-12460314 FN3690-S SNP C -> T AC=1;AN=190;BQB=0.75822;DP=2643;DP4=1376,1173,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.76532e-06;MQSB=0.999951;RPB=0.878128;SGB=62.7569;VDB=0.467638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T224I|364|LOC_Os09g20684|protein_coding|CODING|LOC_Os09g20684.1|3|1) FN1517-S.SNP.9:12462740 chr09:012462740 0 W/12462740-12462740 FN1517-S Single Base Substitution G-A INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN-203.SNP.9:12465333 chr09:012465333 0 W/12465333-12465333 FN-203 Single Base Substitution T-C INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-160.SNP.9:12475124 chr09:012475124 0 W/12475124-12475124 FN-160 Single Base Substitution C-T INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2192-S.SNP.9:12475938 chr09:012475938 0 W/12475938-12475938 FN2192-S SNP A -> T AC=1;AN=190;BQB=0.947526;DP=4840;DP4=2200,2387,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07418e-12;MQSB=0.997453;RPB=0.213587;SGB=71.6393;VDB=0.970732;EFF=INTRON(MODIFIER||||216|LOC_Os09g20710|protein_coding|CODING|LOC_Os09g20710.1|1|1) FN4230-S.SNP.9:12487459 chr09:012487459 0 W/12487459-12487459 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.463561;DP=2441;DP4=1244,1073,9,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00190586;MQSB=0.552621;RPB=0.998373;SGB=38.987;VDB=0.570414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.9:12491911 chr09:012491911 0 W/12491911-12491911 FN2160-S SNP G -> C AC=2;AN=168;BQB=0.0998683;DP=2269;DP4=1159,1043,10,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.51256e-10;MQSB=0.977191;RPB=0.634153;SGB=44.0621;VDB=0.809578;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.9:12495702 chr09:012495702 0 W/12495702-12495702 FN3506-S SNP T -> C AC=1;AN=188;BQB=0.971711;DP=2556;DP4=1248,1263,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.96525e-06;MQSB=0.996222;RPB=0.687425;SGB=35.3493;VDB=0.694248;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T125A|438|LOC_Os09g20740|protein_coding|CODING|LOC_Os09g20740.1|4|1) FN418-S.SNP.9:12500137 chr09:012500137 0 W/12500137-12500137 FN418-S Single Base Substitution G-A INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-119.SNP.9:12500304 chr09:012500304 0 W/12500304-12500304 FN-119 Single Base Substitution A-G INTERGENIC HOMO SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN670-S.SNP.9:12501800 chr09:012501800 0 W/12501800-12501800 FN670-S Single Base Substitution C-T INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. W443-5-1-3.SNP.9:12507868 chr09:012507868 0 W/12507868-12507868 W443-5-1-3 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g20760 retrotransposon protein, putative, unclassified, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN1475-S.SNP.9:12509300 chr09:012509300 0 W/12509300-12509300 FN1475-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3599-S.SNP.9:12514176 chr09:012514176 0 W/12514176-12514176 FN3599-S SNP G -> A AC=2;AN=188;BQB=0.876809;DP=3094;DP4=1199,1767,12,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=5.17615e-14;MQSB=0.000182968;RPB=0.999676;SGB=31.7742;VDB=0.111715;EFF=INTRON(MODIFIER||||283|LOC_Os09g20770|protein_coding|CODING|LOC_Os09g20770.1|2|1) FN1679-S.SNP.9:12522160 chr09:012522160 0 W/12522160-12522160 FN1679-S SNP G -> A AC=1;AN=186;BQB=0.802633;DP=801;DP4=341,409,4,4;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=0.0397618;MQSB=0.990005;RPB=0.993747;SGB=5.73019;VDB=0.405689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.9:12523138 chr09:012523138 0 W/12523138-12523138 FN2292 SNP C -> T AC=1;AN=192;BQB=0.406956;DP=5310;DP4=2505,2388,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.56056e-10;MQSB=0.913488;RPB=0.029962;SGB=59.6861;VDB=0.26484;EFF=INTERGENIC(MODIFIER||||||||||1) FN961-S.SNP.9:12523399 chr09:012523399 0 W/12523399-12523399 FN961-S Single Base Substitution G-T INTERGENIC HET SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1156-S.SNP.9:12525868 chr09:012525868 0 W/12525868-12525868 FN1156-S Single Base Substitution G-A INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1156-XA21.SNP.9:12525868 chr09:012525868 0 W/12525868-12525868 FN1156-XA21 Single Base Substitution G-A INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2595-S.SNP.9:12532280 chr09:012532280 0 W/12532280-12532280 FN2595-S SNP A -> C AC=2;AN=198;BQB=0.529283;DP=4322;DP4=2036,2066,16,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.51621e-25;MQSB=0.262777;RPB=0.965307;SGB=144.408;VDB=0.0341916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.9:12534356 chr09:012534356 0 W/12534356-12534356 FN2370 SNP A -> T AC=1;AN=192;BQB=0.151535;DP=4849;DP4=2348,2239,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206228;MQB=9.02918e-08;MQSB=0.950422;RPB=0.366108;SGB=5.79046;VDB=0.411289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.9:12537575 chr09:012537575 0 W/12537575-12537575 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.818448;DP=2935;DP4=1416,1388,15,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000340716;MQB=2.58736e-12;MQSB=0.773134;RPB=0.122831;SGB=84.9167;VDB=0.222952;EFF=INTRON(MODIFIER||||362|LOC_Os09g20810|protein_coding|CODING|LOC_Os09g20810.1|2|1) FN1163-S.SNP.9:12540451 chr09:012540451 0 W/12540451-12540451 FN1163-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1297-S.SNP.9:12547825 chr09:012547825 0 W/12547825-12547825 FN1297-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g20830 heat shock factor-binding protein 1, putative, expressed SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3366-S.SNP.9:12551292 chr09:012551292 0 W/12551292-12551292 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.145727;DP=3470;DP4=1719,1661,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06234e-07;MQSB=0.963933;RPB=0.242774;SGB=80.3949;VDB=0.670355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A117T|155|LOC_Os09g20840|protein_coding|CODING|LOC_Os09g20840.1|1|1) FN3580-S.SNP.9:12553567 chr09:012553567 0 W/12553567-12553567 FN3580-S SNP T -> G AC=2;AN=188;BQB=0.888673;DP=2850;DP4=1339,1374,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.68335e-10;MQSB=0.997764;RPB=0.981006;SGB=76.2387;VDB=0.773863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-203.SNP.9:12561939 chr09:012561939 0 W/12561939-12561939 FN-203 Single Base Substitution C-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-338.SNP.9:12564313 chr09:012564313 0 W/12564313-12564313 FN-338 Single Base Substitution T-C INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2137-S.SNP.9:12566798 chr09:012566798 0 W/12566798-12566798 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.260938;DP=2578;DP4=1182,1304,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.32377e-08;MQSB=0.934041;RPB=0.565821;SGB=-36.659;VDB=0.318781;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A178T|360|LOC_Os09g20880|protein_coding|CODING|LOC_Os09g20880.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A178T|360|LOC_Os09g20880|protein_coding|CODING|LOC_Os09g20880.2|5|1) FN4022-S.SNP.9:12567408 chr09:012567408 0 W/12567408-12567408 FN4022-S SNP G -> A AC=1;AN=168;BQB=0.996575;DP=2896;DP4=1317,1431,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.52733e-11;MQSB=0.784078;RPB=0.921342;SGB=58.7637;VDB=0.555673;EFF=INTRON(MODIFIER||||360|LOC_Os09g20880|protein_coding|CODING|LOC_Os09g20880.1|2|1),INTRON(MODIFIER||||360|LOC_Os09g20880|protein_coding|CODING|LOC_Os09g20880.2|3|1) FN2215-S.SNP.9:12574453 chr09:012574453 0 W/12574453-12574453 FN2215-S SNP G -> A AC=2;AN=190;BQB=0.999914;DP=4958;DP4=2142,2534,30,25;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000403388;MQB=3.38485e-12;MQSB=0.773384;RPB=0.74253;SGB=125.815;VDB=0.350031;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.9:12574682 chr09:012574682 0 W/12574682-12574682 FN4052-S SNP G -> A AC=1;AN=168;BQB=0.390235;DP=2911;DP4=1468,1331,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.40031e-10;MQSB=0.984758;RPB=0.919159;SGB=12.7756;VDB=0.573108;EFF=INTERGENIC(MODIFIER||||||||||1) FN-36.SNP.9:12576495 chr09:012576495 0 W/12576495-12576495 FN-36 Single Base Substitution G-A INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN2112-S.SNP.9:12588928 chr09:012588928 0 W/12588928-12588928 FN2112-S SNP C -> G AC=2;AN=168;BQB=0.0262623;DP=4331;DP4=2024,2228,28,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.81426e-27;MQSB=0.993243;RPB=0.990063;SGB=-195.691;VDB=0.0561688;EFF=INTRON(MODIFIER||||1133|LOC_Os09g20910|protein_coding|CODING|LOC_Os09g20910.1|4|1) FN979-S.SNP.9:12590489 chr09:012590489 0 W/12590489-12590489 FN979-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2436.SNP.9:12604317 chr09:012604317 0 W/12604317-12604317 FN2436 SNP A -> T AC=1;AN=200;BQB=0.0476066;DP=5116;DP4=2034,2744,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31373e-19;MQSB=0.408841;RPB=0.75596;SGB=141.763;VDB=0.294733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.9:12606230 chr09:012606230 0 W/12606230-12606230 FN3731-S SNP G -> A AC=1;AN=190;BQB=0.723709;DP=2807;DP4=1312,1391,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34498e-07;MQSB=0.989706;RPB=0.419523;SGB=43.2083;VDB=0.54753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.9:12615994 chr09:012615994 0 W/12615994-12615994 FN2296 SNP C -> A AC=1;AN=192;BQB=0.080194;DP=4941;DP4=2393,2301,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000202388;MQB=4.2805e-09;MQSB=0.0605956;RPB=0.716269;SGB=7.3548;VDB=0.486796;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D448Y|477|LOC_Os09g20950|protein_coding|CODING|LOC_Os09g20950.1|4|1) FN2608-S.SNP.9:12619793 chr09:012619793 0 W/12619793-12619793 FN2608-S SNP A -> T AC=2;AN=198;BQB=0.999997;DP=4742;DP4=2166,2348,14,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.07808e-14;MQSB=0.977798;RPB=0.965452;SGB=47.5102;VDB=0.144583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.9:12629607 chr09:012629607 0 W/12629607-12629607 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.254827;DP=4405;DP4=2151,1855,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000227015;MQB=0.000144758;MQSB=0.413587;RPB=0.356434;SGB=33.0593;VDB=0.328773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N673D|687|LOC_Os09g20970|protein_coding|CODING|LOC_Os09g20970.1|2|1) FN_846-8-1.SNP.9:12636587 chr09:012636587 0 W/12636587-12636587 FN_846-8-1 Single Base Substitution T-A HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN-298.SNP.9:12649926 chr09:012649926 0 W/12649926-12649926 FN-298 Single Base Substitution C-A UTR_5_PRIME HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3834-S.SNP.9:12659697 chr09:012659697 0 W/12659697-12659697 FN3834-S SNP G -> A AC=2;AN=190;BQB=0.996678;DP=2868;DP4=1335,1383,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.81052e-13;MQSB=0.98427;RPB=0.626153;SGB=103.742;VDB=0.376778;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.9:12661658 chr09:012661658 0 W/12661658-12661658 FN2708-S SNP T -> A AC=1;AN=200;BQB=0.183686;DP=4900;DP4=2409,2272,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14773e-09;MQSB=0.992905;RPB=0.258668;SGB=7.88476;VDB=0.535571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.9:12661906 chr09:012661906 0 W/12661906-12661906 FN1269-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN4121-S.SNP.9:12662432 chr09:012662432 0 W/12662432-12662432 FN4121-S SNP A -> T AC=1;AN=182;BQB=0.951142;DP=2737;DP4=1426,1205,5,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.04097e-05;MQSB=0.972342;RPB=0.94356;SGB=26.0691;VDB=0.804329;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.9:12662477 chr09:012662477 0 W/12662477-12662477 FN760-S Single Base Substitution T-C INTERGENIC HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN_827-1.SNP.9:12670412 chr09:012670412 0 W/12670412-12670412 FN_827-1 Single Base Substitution C-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1322-S.SNP.9:12670968 chr09:012670968 0 W/12670968-12670968 FN1322-S Single Base Substitution A-G INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN-344.SNP.9:12671540 chr09:012671540 0 W/12671540-12671540 FN-344 Single Base Substitution C-G INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2657-S.SNP.9:12672827 chr09:012672827 0 W/12672827-12672827 FN2657-S SNP A -> G AC=1;AN=200;BQB=0.978442;DP=5166;DP4=2657,2350,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.00712e-11;MQSB=0.886845;RPB=0.918235;SGB=58.2954;VDB=0.365226;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.9:12674683 chr09:012674683 0 W/12674683-12674683 FN2161-S SNP G -> A AC=1;AN=168;BQB=0.00424179;DP=3586;DP4=1535,2011,7,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.10399e-08;MQSB=0.982164;RPB=0.823257;SGB=-140.764;VDB=0.337077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2481.SNP.9:12676319 chr09:012676319 0 W/12676319-12676319 FN2481 SNP C -> T AC=1;AN=200;BQB=0.925043;DP=4523;DP4=2319,1943,7,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00641167;MQB=0.0110972;MQSB=5.89269e-08;RPB=0.991416;SGB=33.0593;VDB=0.168008;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.9:12677474 chr09:012677474 0 W/12677474-12677474 FN-143 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2204-S.SNP.9:12677576 chr09:012677576 0 W/12677576-12677576 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.762642;DP=4957;DP4=2575,2098,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0203752;MQB=4.29262e-05;MQSB=1.772e-14;RPB=0.968334;SGB=103.742;VDB=0.276108;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K101|1223|LOC_Os09g21020|protein_coding|CODING|LOC_Os09g21020.1|1|1) FN1415-S.SNP.9:12677596 chr09:012677596 0 W/12677596-12677596 FN1415-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g21020 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN967-S.SNP.9:12678612 chr09:012678612 0 W/12678612-12678612 FN967-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g21020 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN967-S.SNP.9:12678613 chr09:012678613 0 W/12678613-12678613 FN967-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g21020 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN3354-S.SNP.9:12679602 chr09:012679602 0 W/12679602-12679602 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.941249;DP=2871;DP4=1369,1413,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0160223;MQB=0.501056;MQSB=0.0165709;RPB=0.96563;SGB=39.699;VDB=0.62232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A777T|1223|LOC_Os09g21020|protein_coding|CODING|LOC_Os09g21020.1|1|1) FN4128-S.SNP.9:12681309 chr09:012681309 0 W/12681309-12681309 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.932722;DP=3294;DP4=1614,1575,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00910747;MQB=1.48393e-05;MQSB=0.481293;RPB=0.268197;SGB=46.1603;VDB=0.274938;EFF=INTRON(MODIFIER||||1223|LOC_Os09g21020|protein_coding|CODING|LOC_Os09g21020.1|3|1) FN2584-S.SNP.9:12681397 chr09:012681397 0 W/12681397-12681397 FN2584-S SNP A -> G AC=1;AN=198;BQB=0.110503;DP=4316;DP4=2119,1956,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0125116;MQB=0.39486;MQSB=0.0207442;RPB=0.270945;SGB=72.5051;VDB=0.862348;EFF=INTRON(MODIFIER||||1223|LOC_Os09g21020|protein_coding|CODING|LOC_Os09g21020.1|3|1) FN1065-S.SNP.9:12687142 chr09:012687142 0 W/12687142-12687142 FN1065-S Single Base Substitution A-G INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN953-S.SNP.9:12693496 chr09:012693496 0 W/12693496-12693496 FN953-S Single Base Substitution G-T INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1322-S.SNP.9:12699826 chr09:012699826 0 W/12699826-12699826 FN1322-S Single Base Substitution A-G INTERGENIC HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3831-S.SNP.9:12708059 chr09:012708059 0 W/12708059-12708059 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.586361;DP=2510;DP4=1029,1403,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68395e-07;MQSB=0.999797;RPB=0.412869;SGB=28.7675;VDB=0.0174443;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S6F|96|LOC_Os09g21080|protein_coding|CODING|LOC_Os09g21080.1|1|1) FN3679-S.SNP.9:12720336 chr09:012720336 0 W/12720336-12720336 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.31079;DP=2413;DP4=1090,1055,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.97416e-06;MQSB=0.923436;RPB=0.207252;SGB=-14.3297;VDB=0.713206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.9:12721451 chr09:012721451 0 W/12721451-12721451 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.780984;DP=3611;DP4=1762,1482,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=9.07044e-10;MQSB=0.273813;RPB=0.916673;SGB=57.4238;VDB=0.917268;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.9:12732269 chr09:012732269 0 W/12732269-12732269 FN807-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g21110 leucyl-tRNA synthetase, cytoplasmic, putative, expressed SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN435-S.SNP.9:12735207 chr09:012735207 0 W/12735207-12735207 FN435-S Single Base Substitution G-A INTRON HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN435-S.SNP.9:12735208 chr09:012735208 0 W/12735208-12735208 FN435-S Single Base Substitution C-A INTRON HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN2617-S.SNP.9:12735973 chr09:012735973 0 W/12735973-12735973 FN2617-S SNP T -> C AC=1;AN=198;BQB=0.943655;DP=3414;DP4=1601,1589,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.77316e-14;MQSB=0.687234;RPB=0.97219;SGB=50.1053;VDB=0.43433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.9:12736976 chr09:012736976 0 W/12736976-12736976 FN2711-S SNP C -> T AC=2;AN=200;BQB=0.245613;DP=5073;DP4=2494,2224,29,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.71595e-29;MQSB=0.903576;RPB=0.829267;SGB=11.7017;VDB=0.245398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.9:12741717 chr09:012741717 0 W/12741717-12741717 FN3360-S SNP G -> A AC=2;AN=184;BQB=0.635903;DP=2393;DP4=691,1298,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.3987e-10;MQSB=0.969812;RPB=0.967393;SGB=-8.97434;VDB=0.932967;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.9:12756268 chr09:012756268 0 W/12756268-12756268 FN776-S Single Base Substitution C-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN-155.SNP.9:12762141 chr09:012762141 0 W/12762141-12762141 FN-155 Single Base Substitution C-T INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3287-S.SNP.9:12766382 chr09:012766382 0 W/12766382-12766382 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.971139;DP=2909;DP4=1368,1454,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00137504;MQB=1.45345e-09;MQSB=0.43712;RPB=0.477307;SGB=38.4058;VDB=0.772031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.9:12766809 chr09:012766809 0 W/12766809-12766809 FN2316 SNP C -> T AC=1;AN=192;BQB=0.314581;DP=4980;DP4=2478,2215,21,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200803;MQB=1.44112e-15;MQSB=0.678468;RPB=0.65315;SGB=-44.0408;VDB=0.997202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.9:12767895 chr09:012767895 0 W/12767895-12767895 FN2264-S SNP T -> C AC=1;AN=190;BQB=0.896385;DP=5127;DP4=2367,2381,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000195046;MQB=3.13231e-08;MQSB=0.759042;RPB=0.957381;SGB=39.6545;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.9:12768232 chr09:012768232 0 W/12768232-12768232 FN1109-S Single Base Substitution G-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4121-S.SNP.9:12775471 chr09:012775471 0 W/12775471-12775471 FN4121-S SNP C -> A AC=2;AN=182;BQB=0.978736;DP=2843;DP4=1142,1459,9,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.09694e-12;MQSB=0.990934;RPB=0.993315;SGB=84.7091;VDB=0.881453;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.9:12775471 chr09:012775471 0 W/12775471-12775471 FN548-S Single Base Substitution C-A INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN724-S.SNP.9:12776131 chr09:012776131 0 W/12776131-12776131 FN724-S Single Base Substitution T-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN724-S.SNP.9:12776132 chr09:012776132 0 W/12776132-12776132 FN724-S Single Base Substitution A-T INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3444-S.SNP.9:12792703 chr09:012792703 0 W/12792703-12792703 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.912005;DP=6769;DP4=2281,4309,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00339784;MQB=5.46284e-05;MQSB=1.65224e-07;RPB=0.404377;SGB=56.8786;VDB=0.148798;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G20|421|LOC_Os09g21200|protein_coding|CODING|LOC_Os09g21200.1|1|1) FN4090-S.SNP.9:12794485 chr09:012794485 0 W/12794485-12794485 FN4090-S SNP A -> T AC=1;AN=182;BQB=0.973179;DP=2694;DP4=1277,1353,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.0011e-07;MQSB=0.77398;RPB=0.202564;SGB=44.1115;VDB=0.458056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.9:12795658 chr09:012795658 0 W/12795658-12795658 FN2217-S SNP C -> A AC=1;AN=190;BQB=0.723458;DP=5043;DP4=2400,2371,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91524e-11;MQSB=0.678765;RPB=0.955209;SGB=76.4186;VDB=0.0636631;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.9:12806604 chr09:012806604 0 W/12806604-12806604 W443-5-1-3 Single Base Substitution G-C INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2530-S.SNP.9:12816741 chr09:012816741 0 W/12816741-12816741 FN2530-S SNP C -> A AC=2;AN=198;BQB=0.446241;DP=4300;DP4=1934,2076,13,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.95863e-20;MQSB=0.983692;RPB=0.943504;SGB=73.4614;VDB=0.784015;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.9:12822699 chr09:012822699 0 W/12822699-12822699 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.613135;DP=2333;DP4=1042,1212,7,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.46633e-09;MQSB=0.976125;RPB=0.488887;SGB=29.6545;VDB=0.595453;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.9:12833479 chr09:012833479 0 W/12833479-12833479 FN2684-S SNP C -> A AC=1;AN=200;BQB=0.963578;DP=4468;DP4=1875,2285,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39513e-12;MQSB=0.931831;RPB=0.580097;SGB=23.9365;VDB=0.53234;EFF=INTRON(MODIFIER||||118|LOC_Os09g21270|protein_coding|CODING|LOC_Os09g21270.1|1|1) FN4314-S.SNP.9:12835928 chr09:012835928 0 W/12835928-12835928 FN4314-S SNP A -> T AC=1;AN=170;BQB=0.992484;DP=2186;DP4=1189,917,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.69571e-12;MQSB=0.99976;RPB=0.905186;SGB=62.4192;VDB=0.715686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.9:12840815 chr09:012840815 0 W/12840815-12840815 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN880-S.SNP.9:12842344 chr09:012842344 0 W/12842344-12842344 FN880-S Single Base Substitution A-G INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1243-S.SNP.9:12843594 chr09:012843594 0 W/12843594-12843594 FN1243-S Single Base Substitution T-C INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN416-S.SNP.9:12847017 chr09:012847017 0 W/12847017-12847017 FN416-S Single Base Substitution T-G INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3511-S.SNP.9:12852439 chr09:012852439 0 W/12852439-12852439 FN3511-S SNP G -> T AC=1;AN=188;BQB=0.49024;DP=2940;DP4=1649,1190,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00190581;MQSB=0.722496;RPB=0.975572;SGB=39.8925;VDB=0.908;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.9:12854597 chr09:012854597 0 W/12854597-12854597 FN722-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2403.SNP.9:12857333 chr09:012857333 0 W/12857333-12857333 FN2403 SNP G -> A AC=1;AN=200;BQB=0.315851;DP=4787;DP4=2335,2136,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.73279e-09;MQSB=0.916062;RPB=0.997749;SGB=29.4849;VDB=0.790901;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1485*|1589|LOC_Os09g21320|protein_coding|CODING|LOC_Os09g21320.1|8|1) FN1409-S.SNP.9:12859474 chr09:012859474 0 W/12859474-12859474 FN1409-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN3626-S.SNP.9:12863094 chr09:012863094 0 W/12863094-12863094 FN3626-S SNP A -> G AC=2;AN=190;BQB=0.908153;DP=2967;DP4=1423,1405,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.1671e-15;MQSB=0.845643;RPB=0.974074;SGB=126.511;VDB=0.262467;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D157|1589|LOC_Os09g21320|protein_coding|CODING|LOC_Os09g21320.1|2|1) FN2471.SNP.9:12865071 chr09:012865071 0 W/12865071-12865071 FN2471 SNP G -> A AC=1;AN=200;BQB=0.769863;DP=4670;DP4=2119,2233,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.88476e-18;MQSB=0.959073;RPB=0.835517;SGB=71.1676;VDB=0.264235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.9:12879232 chr09:012879232 0 W/12879232-12879232 FN1697-S SNP A -> T AC=2;AN=188;BQB=0.0156392;DP=2349;DP4=501,1769,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.34391e-06;MQSB=0.897585;RPB=0.999269;SGB=-166.713;VDB=0.369133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-99.SNP.9:12879580 chr09:012879580 0 W/12879580-12879580 FN-99 Single Base Substitution C-T INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3831-S.SNP.9:12880403 chr09:012880403 0 W/12880403-12880403 FN3831-S SNP C -> T AC=1;AN=190;BQB=0.771353;DP=2407;DP4=1099,1189,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83338e-08;MQSB=0.962912;RPB=0.974371;SGB=28.7675;VDB=0.844756;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.9:12882057 chr09:012882057 0 W/12882057-12882057 FN-196 Single Base Substitution A-T INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-303.SNP.9:12882057 chr09:012882057 0 W/12882057-12882057 FN-303 Single Base Substitution A-T INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-36.SNP.9:12883502 chr09:012883502 0 W/12883502-12883502 FN-36 Single Base Substitution A-G INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1029-S.SNP.9:12890251 chr09:012890251 0 W/12890251-12890251 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-115.SNP.9:12892754 chr09:012892754 0 W/12892754-12892754 FN-115 Single Base Substitution G-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3868-S.SNP.9:12892885 chr09:012892885 0 W/12892885-12892885 FN3868-S SNP T -> C AC=1;AN=158;BQB=0.953892;DP=2216;DP4=1060,1072,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000451264;MQB=3.90428e-05;MQSB=0.960911;RPB=0.991157;SGB=17.2267;VDB=0.612706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.9:12900137 chr09:012900137 0 W/12900137-12900137 FN3887-S SNP C -> A AC=1;AN=156;BQB=0.998733;DP=1063;DP4=8,1006,0,13;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=6.26225e-09;MQSB=0.903246;RPB=0.918743;SGB=34.0735;VDB=0.158603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.9:12900138 chr09:012900138 0 W/12900138-12900138 FN3887-S SNP C -> T AC=1;AN=156;BQB=0.99837;DP=1076;DP4=8,1019,0,11;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.13934e-07;MQSB=0.897411;RPB=0.625846;SGB=42.6978;VDB=0.112031;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.9:12902467 chr09:012902467 0 W/12902467-12902467 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.991206;DP=2408;DP4=1109,1216,12,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.13811e-15;MQSB=0.983355;RPB=0.843248;SGB=110.069;VDB=0.303087;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.9:12908568 chr09:012908568 0 W/12908568-12908568 FN429-S Single Base Substitution T-C INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-110.SNP.9:12915563 chr09:012915563 0 W/12915563-12915563 FN-110 Single Base Substitution A-T INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. W502-3-4.SNP.9:12925132 chr09:012925132 0 W/12925132-12925132 W502-3-4 Single Base Substitution G-T INTERGENIC HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN863-S.SNP.9:12930967 chr09:012930967 0 W/12930967-12930967 FN863-S Single Base Substitution A-G INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN-61.SNP.9:12941071 chr09:012941071 0 W/12941071-12941071 FN-61 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g21420 transposon protein, putative, unclassified, expressed SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1405-S.SNP.9:12942598 chr09:012942598 0 W/12942598-12942598 FN1405-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g21420 transposon protein, putative, unclassified, expressed SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2419.SNP.9:12945504 chr09:012945504 0 W/12945504-12945504 FN2419 SNP C -> A AC=1;AN=200;BQB=0.992661;DP=4712;DP4=2328,2144,11,12;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0876486;MQB=0.583951;MQSB=0;RPB=0.475582;SGB=72.7161;VDB=0.168938;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.9:12947541 chr09:012947541 0 W/12947541-12947541 FN1282-S Single Base Substitution G-C INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN996-S.SNP.9:12958352 chr09:012958352 0 W/12958352-12958352 FN996-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g21430 ZOS9-05 - C2H2 zinc finger protein, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN626-S.SNP.9:12965424 chr09:012965424 0 W/12965424-12965424 FN626-S Single Base Substitution T-C INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2265-S.SNP.9:12967143 chr09:012967143 0 W/12967143-12967143 FN2265-S SNP G -> A AC=2;AN=190;BQB=0.337718;DP=4861;DP4=2348,2108,25,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.74148e-22;MQSB=0.652635;RPB=0.766887;SGB=92.6144;VDB=0.628466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.9:12968514 chr09:012968514 0 W/12968514-12968514 FN2375 SNP G -> A AC=1;AN=192;BQB=0.97127;DP=4584;DP4=2137,2148,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.77988e-11;MQSB=0.77471;RPB=0.995296;SGB=12.0478;VDB=0.591649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.9:12971796 chr09:012971796 0 W/12971796-12971796 FN2668-S SNP G -> A AC=2;AN=200;BQB=0.706544;DP=5350;DP4=2021,2933,39,50;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=0;MQSB=0.0175833;RPB=0.110053;SGB=349.565;VDB=0.147351;EFF=UTR_5_PRIME(MODIFIER||32||229|LOC_Os09g21450|protein_coding|CODING|LOC_Os09g21450.1|1|1) FN1014-S.SNP.9:12972987 chr09:012972987 0 W/12972987-12972987 FN1014-S Single Base Substitution C-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN4016-S.SNP.9:12981880 chr09:012981880 0 W/12981880-12981880 FN4016-S SNP C -> T AC=1;AN=168;BQB=0.972192;DP=2259;DP4=1012,1025,13,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77187e-07;MQSB=0.992055;RPB=0.613524;SGB=22.1847;VDB=0.689492;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.9:12981996 chr09:012981996 0 W/12981996-12981996 FN780-S Single Base Substitution A-G INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1423-S.SNP.9:12983218 chr09:012983218 0 W/12983218-12983218 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1115-S.SNP.9:12986114 chr09:012986114 0 W/12986114-12986114 FN1115-S Single Base Substitution A-C INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2161-S.SNP.9:12986443 chr09:012986443 0 W/12986443-12986443 FN2161-S SNP T -> A AC=1;AN=168;BQB=0.32289;DP=4390;DP4=2230,2131,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00022779;MQB=0.000975759;MQSB=0.999282;RPB=0.648812;SGB=-14.9417;VDB=0.910974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.9:12999644 chr09:012999644 0 W/12999644-12999644 FN1297-S Single Base Substitution T-G INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN2536-S.SNP.9:13005498 chr09:013005498 0 W/13005498-13005498 FN2536-S SNP T -> G AC=1;AN=198;BQB=0.558495;DP=4245;DP4=1816,2172,2,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02821e-06;MQSB=0.933418;RPB=0.990099;SGB=-0.221308;VDB=0.0632579;EFF=INTERGENIC(MODIFIER||||||||||1) FN4117-S.SNP.9:13005498 chr09:013005498 0 W/13005498-13005498 FN4117-S SNP T -> G AC=2;AN=182;BQB=0.858398;DP=2976;DP4=1420,1462,14,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.59365e-16;MQSB=0.620142;RPB=0.273687;SGB=116.285;VDB=0.821735;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.9:13005498 chr09:013005498 0 W/13005498-13005498 FN850-S Single Base Substitution T-G INTERGENIC HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN2542-S.SNP.9:13007951 chr09:013007951 0 W/13007951-13007951 FN2542-S SNP G -> A AC=2;AN=198;BQB=0.9584;DP=3922;DP4=1827,1858,13,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.58509e-15;MQSB=0.997661;RPB=0.987956;SGB=83.2905;VDB=0.0476245;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.9:13008693 chr09:013008693 0 W/13008693-13008693 FN4253-S SNP C -> T AC=1;AN=170;BQB=0.942942;DP=2418;DP4=968,1371,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.19998e-08;MQSB=0.63732;RPB=0.879328;SGB=31.4354;VDB=0.118797;EFF=INTERGENIC(MODIFIER||||||||||1) FN1067-S.SNP.9:13023124 chr09:013023124 0 W/13023124-13023124 FN1067-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2597-S.SNP.9:13033388 chr09:013033388 0 W/13033388-13033388 FN2597-S SNP T -> C AC=1;AN=198;BQB=0.897932;DP=4257;DP4=2021,2051,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.45622e-13;MQSB=0.98622;RPB=0.21263;SGB=52.7004;VDB=0.539835;EFF=INTRON(MODIFIER||||204|LOC_Os09g21540|protein_coding|CODING|LOC_Os09g21540.1|1|1) FN594-S.SNP.9:13035324 chr09:013035324 0 W/13035324-13035324 FN594-S Single Base Substitution C-T INTRON HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN3326-S.SNP.9:13035725 chr09:013035725 0 W/13035725-13035725 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.842855;DP=2803;DP4=1257,1470,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.44436e-09;MQSB=0.281864;RPB=0.986847;SGB=46.3132;VDB=0.557628;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I204|204|LOC_Os09g21540|protein_coding|CODING|LOC_Os09g21540.1|3|1) FN1053-S.SNP.9:13035907 chr09:013035907 0 W/13035907-13035907 FN1053-S Single Base Substitution A-C INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1642-S.SNP.9:13052172 chr09:013052172 0 W/13052172-13052172 FN1642-S Single Base Substitution C-G INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN4132-S.SNP.9:13052172 chr09:013052172 0 W/13052172-13052172 FN4132-S SNP C -> G AC=1;AN=182;BQB=0.808543;DP=2568;DP4=1619,869,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.34891e-05;MQSB=0.000428017;RPB=0.32366;SGB=39.6007;VDB=0.702734;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.9:13054395 chr09:013054395 0 W/13054395-13054395 FN3528-S SNP T -> G AC=2;AN=188;BQB=0.744776;DP=2374;DP4=1103,1137,18,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.73564e-15;MQSB=0.975195;RPB=0.863114;SGB=54.0524;VDB=0.0121792;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.9:13058704 chr09:013058704 0 W/13058704-13058704 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN-161.SNP.9:13058705 chr09:013058705 0 W/13058705-13058705 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN3533-S.SNP.9:13060128 chr09:013060128 0 W/13060128-13060128 FN3533-S SNP G -> T AC=1;AN=188;BQB=0.815224;DP=3043;DP4=1516,1404,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.0042721;MQB=3.23927e-05;MQSB=0.998045;RPB=0.730113;SGB=23.5329;VDB=0.670706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.9:13061756 chr09:013061756 0 W/13061756-13061756 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.720814;DP=4344;DP4=2090,1909,15,3;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.109576;MQB=0.130508;MQSB=0.262241;RPB=0.808402;SGB=54.6902;VDB=0.179294;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.9:13063837 chr09:013063837 0 W/13063837-13063837 FN739-S Single Base Substitution T-A INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1336-S.SNP.9:13068266 chr09:013068266 0 W/13068266-13068266 FN1336-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1346-S.SNP.9:13068635 chr09:013068635 0 W/13068635-13068635 FN1346-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN479-S.SNP.9:13068667 chr09:013068667 0 W/13068667-13068667 FN479-S Single Base Substitution C-G INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN866-S.SNP.9:13071239 chr09:013071239 0 W/13071239-13071239 FN866-S Single Base Substitution G-A INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3485-S.SNP.9:13071575 chr09:013071575 0 W/13071575-13071575 FN3485-S SNP G -> A AC=1;AN=184;BQB=0.448046;DP=5219;DP4=2647,2411,17,5;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00670627;MQB=0.147251;MQSB=2.49715e-23;RPB=0.99465;SGB=67.4439;VDB=0.311456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.9:13074142 chr09:013074142 0 W/13074142-13074142 FN3499-S SNP G -> A AC=1;AN=188;BQB=0.0301192;DP=2738;DP4=1444,1233,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0390596;MQSB=0.85318;RPB=0.991555;SGB=8.27326;VDB=0.726018;EFF=INTERGENIC(MODIFIER||||||||||1) FN925-S.SNP.9:13076574 chr09:013076574 0 W/13076574-13076574 FN925-S Single Base Substitution C-T INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN4087-S.SNP.9:13076612 chr09:013076612 0 W/13076612-13076612 FN4087-S SNP G -> T AC=1;AN=182;BQB=0.989949;DP=2867;DP4=1107,1682,4,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.89689e-08;MQSB=0.999035;RPB=0.855593;SGB=62.1548;VDB=0.372655;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.9:13089656 chr09:013089656 0 W/13089656-13089656 FN513-S Single Base Substitution G-C STOP_GAINED HET LOC_Os09g21620 OsFBX325 - F-box domain containing protein, expressed SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1213-S.SNP.9:13098266 chr09:013098266 0 W/13098266-13098266 FN1213-S Single Base Substitution T-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2130-S.SNP.9:13099024 chr09:013099024 0 W/13099024-13099024 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.929935;DP=4464;DP4=1862,2567,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0445789;MQB=0.286028;MQSB=3.40018e-15;RPB=0.208357;SGB=-61.7914;VDB=0.363416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.9:13100250 chr09:013100250 0 W/13100250-13100250 FN2600-S SNP C -> A AC=1;AN=198;BQB=0.841913;DP=3990;DP4=1588,1858,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000250627;MQB=3.85344e-11;MQSB=0.0100183;RPB=0.991651;SGB=25.3006;VDB=0.682237;EFF=INTRON(MODIFIER||||118|LOC_Os09g21630|protein_coding|CODING|LOC_Os09g21630.1|2|1) FN2361.SNP.9:13106451 chr09:013106451 0 W/13106451-13106451 FN2361 SNP T -> C AC=1;AN=192;BQB=0.897358;DP=5215;DP4=2482,2305,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0258869;MQB=2.04496e-05;MQSB=5.35204e-19;RPB=0.487038;SGB=-13.64;VDB=0.1893;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G82|1600|LOC_Os09g21640|protein_coding|CODING|LOC_Os09g21640.1|4|1) FN3355-S.SNP.9:13115129 chr09:013115129 0 W/13115129-13115129 FN3355-S SNP A -> G AC=2;AN=184;BQB=0.862496;DP=2834;DP4=1423,1216,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.99298e-13;MQSB=0.0454613;RPB=0.321135;SGB=53.5365;VDB=0.530488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.9:13119108 chr09:013119108 0 W/13119108-13119108 FN2284 SNP A -> G AC=1;AN=192;BQB=0.531426;DP=4075;DP4=2114,1317,23,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.22463e-17;MQSB=0.946231;RPB=0.556703;SGB=-88.9069;VDB=0.167183;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.9:13122373 chr09:013122373 0 W/13122373-13122373 FN2128-S SNP C -> T AC=2;AN=168;BQB=0.0348215;DP=2601;DP4=1302,1233,13,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.15995e-12;MQSB=0.587386;RPB=0.463037;SGB=-172.886;VDB=0.582027;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.9:13128946 chr09:013128946 0 W/13128946-13128946 FN1023-S Single Base Substitution A-T INTRON HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3627-S.SNP.9:13139546 chr09:013139546 0 W/13139546-13139546 FN3627-S SNP A -> T AC=1;AN=190;BQB=0.954269;DP=1523;DP4=641,756,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92527e-05;MQSB=0.638012;RPB=0.99989;SGB=8.33661;VDB=0.405153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.9:13142939 chr09:013142939 0 W/13142939-13142939 FN1286-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2172-S.SNP.9:13145534 chr09:013145534 0 W/13145534-13145534 FN2172-S SNP G -> A AC=1;AN=168;BQB=0.0355844;DP=3905;DP4=1940,1923,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.00342e-05;MQSB=0.978714;RPB=0.340014;SGB=-15.3725;VDB=0.892547;EFF=UTR_3_PRIME(MODIFIER||546||127|LOC_Os09g21689|protein_coding|CODING|LOC_Os09g21689.3|3|1),INTRON(MODIFIER||||127|LOC_Os09g21689|protein_coding|CODING|LOC_Os09g21689.1|3|1),INTRON(MODIFIER||||127|LOC_Os09g21689|protein_coding|CODING|LOC_Os09g21689.2|3|1) FN927-S.SNP.9:13147300 chr09:013147300 0 W/13147300-13147300 FN927-S Single Base Substitution T-C INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1650-S.SNP.9:13151096 chr09:013151096 0 W/13151096-13151096 FN1650-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. W481-5-1.SNP.9:13152776 chr09:013152776 0 W/13152776-13152776 W481-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3528-S.SNP.9:13155112 chr09:013155112 0 W/13155112-13155112 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.680849;DP=3795;DP4=2280,1426,17,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0051e-13;MQSB=0.303646;RPB=0.985065;SGB=126.215;VDB=0.494639;EFF=UTR_3_PRIME(MODIFIER||88||188|LOC_Os09g21710|protein_coding|CODING|LOC_Os09g21710.1|1|1) FN3909-S.SNP.9:13162170 chr09:013162170 0 W/13162170-13162170 FN3909-S SNP T -> A AC=1;AN=158;BQB=0.993404;DP=2765;DP4=1213,1427,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.11081e-07;MQSB=0.981215;RPB=0.151095;SGB=37.4429;VDB=0.564973;EFF=INTERGENIC(MODIFIER||||||||||1) FN3690-S.SNP.9:13172077 chr09:013172077 0 W/13172077-13172077 FN3690-S SNP C -> T AC=1;AN=190;BQB=0.940746;DP=2940;DP4=1609,1236,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3043e-05;MQSB=0.966305;RPB=0.819076;SGB=39.9877;VDB=0.104744;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.9:13177909 chr09:013177909 0 W/13177909-13177909 FN-122 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g21760 proteasome subunit, putative, expressed SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1067-S.SNP.9:13180443 chr09:013180443 0 W/13180443-13180443 FN1067-S Single Base Substitution C-T INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN-342.SNP.9:13195474 chr09:013195474 0 W/13195474-13195474 FN-342 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g21790 hypothetical protein SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1001-S.SNP.9:13197406 chr09:013197406 0 W/13197406-13197406 FN1001-S Single Base Substitution G-T INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3959-S.SNP.9:13197653 chr09:013197653 0 W/13197653-13197653 FN3959-S SNP A -> T AC=1;AN=168;BQB=0.521406;DP=3259;DP4=1458,1607,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.00227e-05;MQSB=0.891092;RPB=0.972924;SGB=2.75988;VDB=0.215293;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.9:13202778 chr09:013202778 0 W/13202778-13202778 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN4001-S.SNP.9:13203413 chr09:013203413 0 W/13203413-13203413 FN4001-S SNP A -> C AC=2;AN=168;BQB=0.8995;DP=2435;DP4=1175,1157,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23544e-12;MQSB=0.999997;RPB=0.816768;SGB=100.912;VDB=0.84165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.9:13207463 chr09:013207463 0 W/13207463-13207463 FN2220-S SNP T -> G AC=2;AN=190;BQB=0.995507;DP=5007;DP4=2232,2424,23,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00019972;MQB=1.86105e-25;MQSB=0.488277;RPB=0.330996;SGB=226.696;VDB=0.0885614;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.9:13212553 chr09:013212553 0 W/13212553-13212553 FN769-S Single Base Substitution C-T INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2378.SNP.9:13224964 chr09:013224964 0 W/13224964-13224964 FN2378 SNP G -> T AC=1;AN=192;BQB=0.0765344;DP=4303;DP4=1950,2043,10,21;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.15525e-09;MQSB=8.19719e-15;RPB=0.886223;SGB=135.933;VDB=0.386705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G136W|1035|LOC_Os09g21820|protein_coding|CODING|LOC_Os09g21820.1|2|1) FN1036-S.SNP.9:13225981 chr09:013225981 0 W/13225981-13225981 FN1036-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g21820 retrotransposon protein, putative, unclassified, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1658-S.SNP.9:13225981 chr09:013225981 0 W/13225981-13225981 FN1658-S SNP G -> T AC=1;AN=188;BQB=0.579757;DP=2080;DP4=886,1170,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.78291e-05;MQSB=0.472521;RPB=0.447641;SGB=-3.72151;VDB=0.759714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S262I|1035|LOC_Os09g21820|protein_coding|CODING|LOC_Os09g21820.1|3|1) FN2785-S.SNP.9:13237020 chr09:013237020 0 W/13237020-13237020 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.482362;DP=3734;DP4=1865,1668,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0862e-05;MQSB=0.819021;RPB=0.13467;SGB=29.3637;VDB=0.933997;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S549|1154|LOC_Os09g21850|protein_coding|CODING|LOC_Os09g21850.1|3|1) FN_552-1-1.SNP.9:13244285 chr09:013244285 0 W/13244285-13244285 FN_552-1-1 Single Base Substitution C-T HET LOC_Os09g21860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3492-S.SNP.9:13244488 chr09:013244488 0 W/13244488-13244488 FN3492-S SNP G -> T AC=2;AN=184;BQB=0.973064;DP=3919;DP4=1762,2045,23,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.68229e-21;MQSB=0.608288;RPB=0.77992;SGB=130.836;VDB=0.772913;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I243|1451|LOC_Os09g21860|protein_coding|CODING|LOC_Os09g21860.1|1|1) FN3818-S.SNP.9:13245053 chr09:013245053 0 W/13245053-13245053 FN3818-S SNP G -> A AC=1;AN=190;BQB=0.998872;DP=2701;DP4=1082,1499,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.65038e-06;MQSB=4.17109e-10;RPB=0.515372;SGB=36.1006;VDB=0.0183968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A55V|1451|LOC_Os09g21860|protein_coding|CODING|LOC_Os09g21860.1|1|1) FN3627-S.SNP.9:13245193 chr09:013245193 0 W/13245193-13245193 FN3627-S SNP G -> T AC=2;AN=190;BQB=0.340569;DP=2287;DP4=1046,1122,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01385e-07;MQSB=0.000424975;RPB=0.967796;SGB=46.6446;VDB=0.512974;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T8|1451|LOC_Os09g21860|protein_coding|CODING|LOC_Os09g21860.1|1|1) FN2488.SNP.9:13245491 chr09:013245491 0 W/13245491-13245491 FN2488 SNP G -> A AC=1;AN=200;BQB=0.581842;DP=4150;DP4=2193,1714,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000240964;MQB=1.51602e-11;MQSB=0.967041;RPB=0.31594;SGB=81.8956;VDB=0.157144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P335L|340|LOC_Os09g21870|protein_coding|CODING|LOC_Os09g21870.1|3|1) FN1515-S.SNP.9:13250147 chr09:013250147 0 W/13250147-13250147 FN1515-S Single Base Substitution A-G INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN846-S.SNP.9:13251077 chr09:013251077 0 W/13251077-13251077 FN846-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os09g21880 hypothetical protein SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3930-S.SNP.9:13257431 chr09:013257431 0 W/13257431-13257431 FN3930-S SNP T -> G AC=1;AN=158;BQB=0.979367;DP=2543;DP4=1319,1149,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.09094e-08;MQSB=0.757792;RPB=0.101774;SGB=55.806;VDB=0.302578;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.9:13257974 chr09:013257974 0 W/13257974-13257974 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.847439;DP=3066;DP4=1525,1476,5,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.89817e-11;MQSB=0.98515;RPB=0.569394;SGB=56.6929;VDB=0.467038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.9:13260115 chr09:013260115 0 W/13260115-13260115 FN2419 SNP C -> T AC=1;AN=200;BQB=0.667043;DP=3666;DP4=1701,1453,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02965e-08;MQSB=1.01828e-06;RPB=0.527591;SGB=95.7111;VDB=0.0174793;EFF=UTR_5_PRIME(MODIFIER||183||118|LOC_Os09g21900|protein_coding|CODING|LOC_Os09g21900.1|1|1) FN3444-S.SNP.9:13261714 chr09:013261714 0 W/13261714-13261714 FN3444-S SNP A -> C AC=1;AN=184;BQB=0.962802;DP=2570;DP4=1066,1369,2,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82805e-07;MQSB=0.994773;RPB=0.878225;SGB=44.2207;VDB=0.289677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.9:13266098 chr09:013266098 0 W/13266098-13266098 FN3525-S SNP C -> A AC=1;AN=188;BQB=0.930534;DP=2122;DP4=868,1181,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000166211;MQSB=0.999953;RPB=0.947193;SGB=26.2637;VDB=0.388649;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.9:13269484 chr09:013269484 0 W/13269484-13269484 FN3661-S SNP G -> T AC=1;AN=190;BQB=0.974207;DP=3044;DP4=1271,1588,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000214869;MQSB=0.770801;RPB=0.988953;SGB=30.8803;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.9:13288095 chr09:013288095 0 W/13288095-13288095 FN3828-S SNP T -> C AC=1;AN=190;BQB=0.368157;DP=3126;DP4=1395,1534,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.83168e-07;MQSB=0.208348;RPB=0.903079;SGB=7.21887;VDB=0.654039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1276-S.SNP.9:13290748 chr09:013290748 0 W/13290748-13290748 FN1276-S Single Base Substitution G-A INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1337-S.SNP.9:13296669 chr09:013296669 0 W/13296669-13296669 FN1337-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1232-S.SNP.9:13299671 chr09:013299671 0 W/13299671-13299671 FN1232-S Single Base Substitution C-T INTERGENIC HET SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1287-S.SNP.9:13303370 chr09:013303370 0 W/13303370-13303370 FN1287-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g21980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3767-S.SNP.9:13323995 chr09:013323995 0 W/13323995-13323995 FN3767-S SNP C -> G AC=1;AN=190;BQB=0.9998;DP=2701;DP4=1354,1213,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.06667e-07;MQSB=0.997722;RPB=0.97539;SGB=49.0954;VDB=0.194617;EFF=INTRON(MODIFIER||||373|LOC_Os09g22000|protein_coding|CODING|LOC_Os09g22000.1|6|1) FN4201-S.SNP.9:13324454 chr09:013324454 0 W/13324454-13324454 FN4201-S SNP A -> T AC=1;AN=170;BQB=0.970031;DP=2596;DP4=1211,1310,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.23025e-10;MQSB=0.966075;RPB=0.878688;SGB=61.2001;VDB=0.810286;EFF=INTRON(MODIFIER||||373|LOC_Os09g22000|protein_coding|CODING|LOC_Os09g22000.1|6|1) FN3753-S.SNP.9:13338398 chr09:013338398 0 W/13338398-13338398 FN3753-S SNP C -> T AC=1;AN=190;BQB=0.997451;DP=3135;DP4=1633,1407,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000318979;MQB=3.81609e-09;MQSB=0.997962;RPB=0.984311;SGB=67.3108;VDB=0.26298;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q378*|586|LOC_Os09g22020|protein_coding|CODING|LOC_Os09g22020.1|7|1);LOF=(LOC_Os09g22020|LOC_Os09g22020|1|1.00);NMD=(LOC_Os09g22020|LOC_Os09g22020|1|1.00) FN-104.SNP.9:13341922 chr09:013341922 0 W/13341922-13341922 FN-104 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1265-S.SNP.9:13342129 chr09:013342129 0 W/13342129-13342129 FN1265-S Single Base Substitution G-T INTRON HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN1547-S.SNP.9:13345015 chr09:013345015 0 W/13345015-13345015 FN1547-S Single Base Substitution G-C SYNONYMOUS_CODING Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN4174-S.SNP.9:13345211 chr09:013345211 0 W/13345211-13345211 FN4174-S SNP G -> C AC=1;AN=170;BQB=0.979494;DP=2382;DP4=1048,1278,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.50037e-06;MQSB=0.980835;RPB=0.992278;SGB=43.4296;VDB=0.187522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A36G|1503|LOC_Os09g22030|protein_coding|CODING|LOC_Os09g22030.1|1|1) FN3720-S.SNP.9:13351000 chr09:013351000 0 W/13351000-13351000 FN3720-S SNP C -> T AC=2;AN=190;BQB=0.952131;DP=2622;DP4=990,1522,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.02336e-11;MQSB=0.535156;RPB=0.999002;SGB=85.5263;VDB=0.485109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.9:13351373 chr09:013351373 0 W/13351373-13351373 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.900891;DP=3773;DP4=2001,1501,19,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16723e-15;MQSB=0.9669;RPB=0.867527;SGB=97.671;VDB=0.205538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.9:13351373 chr09:013351373 0 W/13351373-13351373 FN2572-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. W450-6-1.SNP.9:13354202 chr09:013354202 0 W/13354202-13354202 W450-6-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g22040 expressed protein SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN962-S.SNP.9:13357748 chr09:013357748 0 W/13357748-13357748 FN962-S Single Base Substitution G-A INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN678-S.SNP.9:13361407 chr09:013361407 0 W/13361407-13361407 FN678-S Single Base Substitution T-A INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN-123.SNP.9:13363771 chr09:013363771 0 W/13363771-13363771 FN-123 Single Base Substitution C-T INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN2441.SNP.9:13363862 chr09:013363862 0 W/13363862-13363862 FN2441 SNP C -> T AC=1;AN=200;BQB=0.553236;DP=3244;DP4=1005,1765,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.17054e-06;MQSB=0.956225;RPB=0.174609;SGB=54.2646;VDB=0.635306;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.9:13367749 chr09:013367749 0 W/13367749-13367749 FN4051-S SNP A -> T AC=1;AN=168;BQB=0.694461;DP=2320;DP4=900,1347,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.51445e-07;MQSB=0.997332;RPB=0.928405;SGB=27.0464;VDB=0.876701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.9:13367902 chr09:013367902 0 W/13367902-13367902 FN1106-S Single Base Substitution C-A INTERGENIC HOMO SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3532-S.SNP.9:13372874 chr09:013372874 0 W/13372874-13372874 FN3532-S SNP G -> A AC=1;AN=188;BQB=0.429186;DP=1359;DP4=54,1219,1,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00154588;MQSB=0.224025;RPB=0.892725;SGB=39.8925;VDB=0.923365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.9:13374910 chr09:013374910 0 W/13374910-13374910 FN2314 SNP G -> A AC=1;AN=192;BQB=0.06076;DP=4872;DP4=2336,2195,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000548;MQSB=0.577623;RPB=0.420351;SGB=-16.4617;VDB=0.820461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.9:13381924 chr09:013381924 0 W/13381924-13381924 FN1324-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2106-S.SNP.9:13384798 chr09:013384798 0 W/13384798-13384798 FN2106-S SNP C -> T AC=2;AN=168;BQB=0.53001;DP=3472;DP4=1678,1724,26,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.57527e-28;MQSB=0.987961;RPB=0.744298;SGB=-56.5804;VDB=0.333106;EFF=INTRON(MODIFIER||||345|LOC_Os09g22100|protein_coding|CODING|LOC_Os09g22100.1|4|1) FN2563-S.SNP.9:13386991 chr09:013386991 0 W/13386991-13386991 FN2563-S SNP A -> C AC=2;AN=198;BQB=0.781792;DP=4347;DP4=2149,2034,8,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.38646e-08;MQSB=0.922818;RPB=0.453159;SGB=47.3393;VDB=0.67309;EFF=INTRON(MODIFIER||||345|LOC_Os09g22100|protein_coding|CODING|LOC_Os09g22100.1|8|1) FN3452-S.SNP.9:13387366 chr09:013387366 0 W/13387366-13387366 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.632409;DP=2616;DP4=1254,1290,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000145869;MQSB=0.970034;RPB=0.999439;SGB=25.1826;VDB=0.610755;EFF=INTRON(MODIFIER||||345|LOC_Os09g22100|protein_coding|CODING|LOC_Os09g22100.1|8|1) FN3454-S.SNP.9:13392623 chr09:013392623 0 W/13392623-13392623 FN3454-S SNP T -> C AC=2;AN=184;BQB=0.981509;DP=2877;DP4=1380,1389,16,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.11029e-13;MQSB=0.897433;RPB=0.803905;SGB=45.9712;VDB=0.111412;EFF=INTRON(MODIFIER||||772|LOC_Os09g22110|protein_coding|CODING|LOC_Os09g22110.1|4|1) FN3776-S.SNP.9:13392623 chr09:013392623 0 W/13392623-13392623 FN3776-S SNP T -> C AC=2;AN=190;BQB=0.973379;DP=2764;DP4=1316,1359,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10364e-11;MQSB=0.951887;RPB=0.471971;SGB=94.6341;VDB=0.245702;EFF=INTRON(MODIFIER||||772|LOC_Os09g22110|protein_coding|CODING|LOC_Os09g22110.1|4|1) FN1465-S.SNP.9:13395112 chr09:013395112 0 W/13395112-13395112 FN1465-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g22110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1475-S.SNP.9:13401876 chr09:013401876 0 W/13401876-13401876 FN1475-S Single Base Substitution G-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3292-S.SNP.9:13402438 chr09:013402438 0 W/13402438-13402438 FN3292-S SNP T -> A AC=2;AN=184;BQB=0.963677;DP=2792;DP4=1481,1218,16,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.06088e-17;MQSB=0.968696;RPB=0.734977;SGB=85.0529;VDB=0.260922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.9:13402440 chr09:013402440 0 W/13402440-13402440 FN3292-S SNP C -> A AC=2;AN=184;BQB=0.580702;DP=2791;DP4=1469,1209,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.60272e-17;MQSB=0.998718;RPB=0.812258;SGB=85.0529;VDB=0.253713;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.9:13407969 chr09:013407969 0 W/13407969-13407969 FN-185 Single Base Substitution G-T INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN-185.SNP.9:13407970 chr09:013407970 0 W/13407970-13407970 FN-185 Single Base Substitution A-T INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1525-S.SNP.9:13415710 chr09:013415710 0 W/13415710-13415710 FN1525-S Single Base Substitution C-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2779-S.SNP.9:13417503 chr09:013417503 0 W/13417503-13417503 FN2779-S SNP C -> T AC=1;AN=198;BQB=0.997668;DP=4395;DP4=2172,1894,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04303e-16;MQSB=0.826067;RPB=0.837632;SGB=94.0758;VDB=0.405693;EFF=INTERGENIC(MODIFIER||||||||||1) FN-275.SNP.9:13418448 chr09:013418448 0 W/13418448-13418448 FN-275 Single Base Substitution A-G INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN855-S.SNP.9:13422829 chr09:013422829 0 W/13422829-13422829 FN855-S Single Base Substitution C-T INTERGENIC HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN2529-S.SNP.9:13432807 chr09:013432807 0 W/13432807-13432807 FN2529-S SNP T -> C AC=1;AN=198;BQB=0.793471;DP=3867;DP4=1745,1775,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51949e-08;MQSB=0.998387;RPB=0.971591;SGB=43.7442;VDB=0.980922;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.9:13433707 chr09:013433707 0 W/13433707-13433707 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN4149-S.SNP.9:13437460 chr09:013437460 0 W/13437460-13437460 FN4149-S SNP G -> C AC=1;AN=170;BQB=0.614569;DP=2979;DP4=1422,1475,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.50479e-08;MQSB=0.990909;RPB=0.37249;SGB=45.206;VDB=0.905522;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.9:13439602 chr09:013439602 0 W/13439602-13439602 FN4240-S SNP T -> G AC=1;AN=170;BQB=0.319711;DP=2400;DP4=1220,1107,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.00236657;MQSB=1.86432e-07;RPB=0.993744;SGB=1.44716;VDB=0.975167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.9:13439906 chr09:013439906 0 W/13439906-13439906 FN1456-S Single Base Substitution T-G INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN4094-S.SNP.9:13442446 chr09:013442446 0 W/13442446-13442446 FN4094-S SNP A -> T AC=1;AN=182;BQB=0.989727;DP=3030;DP4=1487,1436,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.96575e-06;MQSB=0.972827;RPB=0.469697;SGB=44.1115;VDB=0.665619;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K405*|691|LOC_Os09g22220|protein_coding|CODING|LOC_Os09g22220.1|5|1);LOF=(LOC_Os09g22220|LOC_Os09g22220|1|1.00);NMD=(LOC_Os09g22220|LOC_Os09g22220|1|1.00) FN-411.SNP.9:13447647 chr09:013447647 0 W/13447647-13447647 FN-411 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g22230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN3934-S.SNP.9:13454119 chr09:013454119 0 W/13454119-13454119 FN3934-S SNP G -> T AC=1;AN=158;BQB=0.440342;DP=4778;DP4=3231,1333,41,14;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.0602763;MQB=1.01521e-09;MQSB=0;RPB=0.121755;SGB=-1486.58;VDB=1.92535e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.9:13456764 chr09:013456764 0 W/13456764-13456764 FN2424 SNP C -> T AC=1;AN=200;BQB=0.172072;DP=5185;DP4=2233,2517,9,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00405014;MQB=0.00187178;MQSB=0.002209;RPB=0.999894;SGB=-34.5259;VDB=0.981143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.9:13459756 chr09:013459756 0 W/13459756-13459756 FN3626-S SNP C -> T AC=2;AN=190;BQB=0.811582;DP=2820;DP4=1259,1449,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.5999e-13;MQSB=0.834952;RPB=0.997419;SGB=82.301;VDB=0.871458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.9:13469052 chr09:013469052 0 W/13469052-13469052 FN1335-S Single Base Substitution G-A INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. W313-1-1-1-1.SNP.9:13472547 chr09:013472547 0 W/13472547-13472547 W313-1-1-1-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g22280 expressed protein SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. W313-1-1-1-1.SNP.9:13472548 chr09:013472548 0 W/13472548-13472548 W313-1-1-1-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. W313-1-1-1-1.SNP.9:13472549 chr09:013472549 0 W/13472549-13472549 W313-1-1-1-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g22280 expressed protein SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3545-S.SNP.9:13473926 chr09:013473926 0 W/13473926-13473926 FN3545-S SNP A -> G AC=2;AN=188;BQB=0.674705;DP=3341;DP4=1401,1781,20,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.50993e-24;MQSB=0.99983;RPB=0.45841;SGB=135.196;VDB=0.567808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.9:13474060 chr09:013474060 0 W/13474060-13474060 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.959861;DP=3075;DP4=1228,1780,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.43206e-06;MQSB=0.852491;RPB=0.110566;SGB=44.4357;VDB=0.343845;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.9:13477872 chr09:013477872 0 W/13477872-13477872 FN1667-S SNP C -> T AC=2;AN=188;BQB=0.974392;DP=2010;DP4=972,989,12,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.79739e-14;MQSB=0.714172;RPB=0.138022;SGB=-9.56681;VDB=0.479418;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S365|1530|LOC_Os09g22310|protein_coding|CODING|LOC_Os09g22310.1|2|1) FN3839-S.SNP.9:13480591 chr09:013480591 0 W/13480591-13480591 FN3839-S SNP C -> T AC=1;AN=190;BQB=0.868514;DP=3509;DP4=1697,1605,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.65806e-10;MQSB=0.760892;RPB=0.123486;SGB=62.7569;VDB=0.313043;EFF=INTRON(MODIFIER||||1530|LOC_Os09g22310|protein_coding|CODING|LOC_Os09g22310.1|5|1) FN3838-S.SNP.9:13492133 chr09:013492133 0 W/13492133-13492133 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.953303;DP=2838;DP4=1318,1425,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00281889;MQB=0.00485122;MQSB=0.00068189;RPB=0.822015;SGB=35.4339;VDB=0.942216;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.9:13496293 chr09:013496293 0 W/13496293-13496293 FN-186 Single Base Substitution G-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-186.SNP.9:13496294 chr09:013496294 0 W/13496294-13496294 FN-186 Single Base Substitution A-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1273-S.SNP.9:13496969 chr09:013496969 0 W/13496969-13496969 FN1273-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g22340 retrotransposon protein, putative, unclassified, expressed SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN4203-S.SNP.9:13503356 chr09:013503356 0 W/13503356-13503356 FN4203-S SNP G -> A AC=2;AN=170;BQB=0.999198;DP=2280;DP4=1055,1138,11,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.40286e-15;MQSB=0.980001;RPB=0.984561;SGB=123.397;VDB=0.847977;EFF=INTERGENIC(MODIFIER||||||||||1) FN1721-S.SNP.9:13506145 chr09:013506145 0 W/13506145-13506145 FN1721-S SNP C -> A AC=1;AN=188;BQB=0.0614546;DP=2412;DP4=1180,1185,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000829187;MQB=4.81089e-05;MQSB=0.0445516;RPB=0.966604;SGB=-15.5431;VDB=0.462893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P50T|822|LOC_Os09g22350|protein_coding|CODING|LOC_Os09g22350.1|1|1) FN3810-S.SNP.9:13506280 chr09:013506280 0 W/13506280-13506280 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.850903;DP=3286;DP4=1635,1507,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0343883;MQB=0.577236;MQSB=0.902418;RPB=0.880442;SGB=18.552;VDB=0.138668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H95Y|822|LOC_Os09g22350|protein_coding|CODING|LOC_Os09g22350.1|1|1) FN463-S.SNP.9:13507158 chr09:013507158 0 W/13507158-13507158 FN463-S Single Base Substitution A-T STOP_GAINED HET LOC_Os09g22350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2657-S.SNP.9:13507587 chr09:013507587 0 W/13507587-13507587 FN2657-S SNP G -> C AC=2;AN=200;BQB=0.998587;DP=4373;DP4=1994,2123,32,27;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.00891836;MQB=0.595327;MQSB=0.1101;RPB=0.0646074;SGB=202.502;VDB=0.475584;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V502L|822|LOC_Os09g22350|protein_coding|CODING|LOC_Os09g22350.1|2|1) FN434-S.SNP.9:13516315 chr09:013516315 0 W/13516315-13516315 FN434-S Single Base Substitution C-T INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN944-S.SNP.9:13518675 chr09:013518675 0 W/13518675-13518675 FN944-S Single Base Substitution T-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3467-S.SNP.9:13520400 chr09:013520400 0 W/13520400-13520400 FN3467-S SNP G -> A AC=1;AN=184;BQB=0.988712;DP=4325;DP4=2134,2084,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.69569e-14;MQSB=0.923678;RPB=0.187901;SGB=103.004;VDB=0.590239;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A306|430|LOC_Os09g22370|protein_coding|CODING|LOC_Os09g22370.1|3|1) FN763-S.SNP.9:13520400 chr09:013520400 0 W/13520400-13520400 FN763-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN931-S.SNP.9:13520400 chr09:013520400 0 W/13520400-13520400 FN931-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3457-S.SNP.9:13520887 chr09:013520887 0 W/13520887-13520887 FN3457-S SNP T -> C AC=2;AN=184;BQB=0.937955;DP=4191;DP4=1980,2060,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.40577e-20;MQSB=0.916583;RPB=0.930928;SGB=148.222;VDB=0.0544891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D144G|430|LOC_Os09g22370|protein_coding|CODING|LOC_Os09g22370.1|3|1) FN461-S.SNP.9:13521505 chr09:013521505 0 W/13521505-13521505 FN461-S Single Base Substitution C-T INTRON HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3535-S.SNP.9:13527509 chr09:013527509 0 W/13527509-13527509 FN3535-S SNP G -> T AC=2;AN=188;BQB=0.684875;DP=3265;DP4=1193,1994,8,5;HOB=0.0210502;ICB=0.494738;MQ=24;MQ0F=0.29464;MQB=0.122006;MQSB=0;RPB=0.453883;SGB=53.5223;VDB=0.826413;EFF=INTRON(MODIFIER||||87|LOC_Os09g22390|protein_coding|CODING|LOC_Os09g22390.1|1|1) FN3369-S.SNP.9:13528878 chr09:013528878 0 W/13528878-13528878 FN3369-S SNP G -> A AC=1;AN=184;BQB=0.827727;DP=3175;DP4=1733,1328,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.02629e-13;MQSB=0.777863;RPB=0.0944171;SGB=89.4385;VDB=0.0053854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G4S|415|LOC_Os09g22400|protein_coding|CODING|LOC_Os09g22400.1|1|1) FN-77.SNP.9:13529052 chr09:013529052 0 W/13529052-13529052 FN-77 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g22400 transposon protein, putative, unclassified, expressed SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN3694-S.SNP.9:13540198 chr09:013540198 0 W/13540198-13540198 FN3694-S SNP T -> A AC=1;AN=190;BQB=0.980202;DP=2870;DP4=1110,1616,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.32038e-10;MQSB=0.999754;RPB=0.819178;SGB=53.8699;VDB=0.0880389;EFF=INTERGENIC(MODIFIER||||||||||1) FN936-S.SNP.9:13549130 chr09:013549130 0 W/13549130-13549130 FN936-S Single Base Substitution C-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2749-S.SNP.9:13551491 chr09:013551491 0 W/13551491-13551491 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.247017;DP=4771;DP4=2146,2355,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11872e-12;MQSB=0.846389;RPB=0.999999;SGB=86.5007;VDB=0.950741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.9:13551576 chr09:013551576 0 W/13551576-13551576 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.999969;DP=4799;DP4=2068,2380,11,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.82635e-19;MQSB=0.987638;RPB=0.657366;SGB=112.373;VDB=0.492457;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.9:13555217 chr09:013555217 0 W/13555217-13555217 FN1582-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3558-S.SNP.9:13571677 chr09:013571677 0 W/13571677-13571677 FN3558-S SNP A -> T AC=1;AN=188;BQB=0.938903;DP=2843;DP4=1456,1332,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39725e-10;MQSB=0.926218;RPB=0.804654;SGB=62.6088;VDB=0.89288;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L152*|161|LOC_Os09g22500|protein_coding|CODING|LOC_Os09g22500.1|5|1) FN3558-S.SNP.9:13571678 chr09:013571678 0 W/13571678-13571678 FN3558-S SNP A -> T AC=1;AN=188;BQB=0.965628;DP=2864;DP4=1423,1311,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.62117e-11;MQSB=0.953569;RPB=0.887508;SGB=50.1574;VDB=0.872143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Atg|L152M|161|LOC_Os09g22500|protein_coding|CODING|LOC_Os09g22500.1|5|1) FN689-S.SNP.9:13571830 chr09:013571830 0 W/13571830-13571830 FN689-S Single Base Substitution A-T INTRON HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3527-S.SNP.9:13577806 chr09:013577806 0 W/13577806-13577806 FN3527-S SNP C -> A AC=1;AN=188;BQB=0.375951;DP=4156;DP4=1477,2539,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.43169e-13;MQSB=0.9688;RPB=0.25008;SGB=20.9711;VDB=0.573532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.9:13579940 chr09:013579940 0 W/13579940-13579940 FN2479 SNP G -> C AC=1;AN=200;BQB=0.940919;DP=4413;DP4=1985,2236,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06315e-10;MQSB=0.927317;RPB=0.487372;SGB=58.2954;VDB=0.416988;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.9:13580341 chr09:013580341 0 W/13580341-13580341 FN1049-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g22510 expressed protein SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1346-S.SNP.9:13585154 chr09:013585154 0 W/13585154-13585154 FN1346-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1011-S.SNP.9:13586449 chr09:013586449 0 W/13586449-13586449 FN1011-S Single Base Substitution C-T INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3415-S.SNP.9:13587096 chr09:013587096 0 W/13587096-13587096 FN3415-S SNP A -> G AC=1;AN=184;BQB=0.945278;DP=2820;DP4=1302,1411,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.91525e-12;MQSB=0.997092;RPB=0.732757;SGB=80.3949;VDB=0.555883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.9:13590617 chr09:013590617 0 W/13590617-13590617 FN2362 SNP G -> A AC=2;AN=192;BQB=0.776422;DP=4269;DP4=1566,2395,17,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.01451e-24;MQSB=0.515643;RPB=0.511831;SGB=1.59742;VDB=0.82156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.9:13592587 chr09:013592587 0 W/13592587-13592587 FN3818-S SNP A -> T AC=1;AN=190;BQB=0.951682;DP=2956;DP4=1250,1558,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.85893e-09;MQSB=0.929084;RPB=0.747268;SGB=53.8699;VDB=0.298154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.9:13593310 chr09:013593310 0 W/13593310-13593310 FN3572-S SNP A -> G AC=1;AN=188;BQB=0.455749;DP=2012;DP4=675,1092,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.8825e-09;MQSB=0.702347;RPB=0.944173;SGB=-79.0704;VDB=0.0635286;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.9:13598347 chr09:013598347 0 W/13598347-13598347 FN-303 Single Base Substitution C-T INTRON HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN2486.SNP.9:13603146 chr09:013603146 0 W/13603146-13603146 FN2486 SNP G -> A AC=1;AN=200;BQB=0.931964;DP=5307;DP4=3315,1712,34,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.062182;MQB=1.62356e-08;MQSB=1.96182e-44;RPB=0.98664;SGB=107.64;VDB=0.837325;EFF=START_LOST(HIGH|MISSENSE|atG/atA|M1I|74|LOC_Os09g22550|protein_coding|CODING|LOC_Os09g22550.1|1|1);LOF=(LOC_Os09g22550|LOC_Os09g22550|1|1.00) FN722-S.SNP.9:13604391 chr09:013604391 0 W/13604391-13604391 FN722-S Single Base Substitution C-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2542-S.SNP.9:13613278 chr09:013613278 0 W/13613278-13613278 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.938967;DP=9068;DP4=4073,4566,17,4;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.000661667;MQB=0.0009157;MQSB=0.2475;RPB=0.965146;SGB=65.3149;VDB=0.527214;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.9:13614496 chr09:013614496 0 W/13614496-13614496 FN933-S Single Base Substitution C-T INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2596-S.SNP.9:13623692 chr09:013623692 0 W/13623692-13623692 FN2596-S SNP G -> T AC=2;AN=198;BQB=0.0164409;DP=1809;DP4=1449,167,12,1;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=0.0296974;MQSB=0.00820258;RPB=0.835879;SGB=1.37381;VDB=0.945228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3578-S.SNP.9:13623692 chr09:013623692 0 W/13623692-13623692 FN3578-S SNP G -> T AC=2;AN=186;BQB=0.817271;DP=880;DP4=668,129,14,0;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=2.49504e-07;MQSB=0.920826;RPB=0.0751443;SGB=55.131;VDB=0.502073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.9:13626653 chr09:013626653 0 W/13626653-13626653 FN2599-S SNP T -> A AC=1;AN=198;BQB=0.789519;DP=3692;DP4=1757,1727,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.87096e-12;MQSB=0.99821;RPB=0.997027;SGB=72.5051;VDB=0.705107;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T499S|514|LOC_Os09g23070|protein_coding|CODING|LOC_Os09g23070.2|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Tca|T499S|517|LOC_Os09g23070|protein_coding|CODING|LOC_Os09g23070.1|11|1) 703-3.SNP.9:13627911 chr09:013627911 0 W/13627911-13627911 703-3 Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1452, Mutant_ID: 703-3, Generation: M2, Mutations: 24, Genes: 38, Seed availability: Yes. FN3776-S.SNP.9:13629967 chr09:013629967 0 W/13629967-13629967 FN3776-S SNP A -> T AC=1;AN=190;BQB=0.937885;DP=2406;DP4=1393,858,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.27792e-07;MQSB=0.21452;RPB=0.819928;SGB=4.11112;VDB=0.466689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.9:13629968 chr09:013629968 0 W/13629968-13629968 FN3776-S SNP A -> T AC=1;AN=190;BQB=0.959469;DP=2404;DP4=1398,869,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.22895e-08;MQSB=0.218536;RPB=0.907357;SGB=49.0954;VDB=0.338575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.9:13633318 chr09:013633318 0 W/13633318-13633318 FN2268-S SNP A -> T AC=1;AN=190;BQB=0.999972;DP=4616;DP4=2141,2219,17,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.60395e-14;MQSB=0.773785;RPB=0.952449;SGB=117.403;VDB=0.692508;EFF=INTRON(MODIFIER||||556|LOC_Os09g23084|protein_coding|CODING|LOC_Os09g23084.1|2|1) FN421-S.SNP.9:13633318 chr09:013633318 0 W/13633318-13633318 FN421-S Single Base Substitution A-T INTRON HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1045-S.SNP.9:13635244 chr09:013635244 0 W/13635244-13635244 FN1045-S Single Base Substitution A-T INTRON HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1357-S.SNP.9:13635244 chr09:013635244 0 W/13635244-13635244 FN1357-S Single Base Substitution A-T INTRON HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3915-S.SNP.9:13638879 chr09:013638879 0 W/13638879-13638879 FN3915-S SNP A -> G AC=2;AN=158;BQB=0.975418;DP=2304;DP4=947,1249,12,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.0415e-13;MQSB=0.80579;RPB=0.12925;SGB=67.7679;VDB=0.0543756;EFF=INTRON(MODIFIER||||556|LOC_Os09g23084|protein_coding|CODING|LOC_Os09g23084.1|2|1) FN2164-S.SNP.9:13644253 chr09:013644253 0 W/13644253-13644253 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.0010675;DP=3586;DP4=1918,1625,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3034e-05;MQSB=0.999898;RPB=0.83703;SGB=-137.195;VDB=0.415989;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.9:13644742 chr09:013644742 0 W/13644742-13644742 FN1749-S SNP C -> A AC=1;AN=188;BQB=0.958369;DP=3556;DP4=1951,1562,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12084e-07;MQSB=0.997652;RPB=0.598456;SGB=-35.081;VDB=0.838624;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.9:13645713 chr09:013645713 0 W/13645713-13645713 FN-341 Single Base Substitution C-G INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN-341.SNP.9:13645715 chr09:013645715 0 W/13645715-13645715 FN-341 Single Base Substitution T-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN3971-S.SNP.9:13656987 chr09:013656987 0 W/13656987-13656987 FN3971-S SNP T -> A AC=1;AN=168;BQB=0.978604;DP=2434;DP4=1202,1149,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.91777e-05;MQSB=0.827206;RPB=0.914428;SGB=30.0193;VDB=0.70846;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.9:13664657 chr09:013664657 0 W/13664657-13664657 FN3858-S SNP T -> C AC=1;AN=158;BQB=0.325555;DP=1010;DP4=587,176,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=8.82922e-05;MQSB=3.19469e-08;RPB=0.783396;SGB=-44.1507;VDB=0.00355675;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.9:13666408 chr09:013666408 0 W/13666408-13666408 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.811866;DP=2281;DP4=962,1171,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.84988e-07;MQSB=0.266936;RPB=0.887606;SGB=44.1818;VDB=0.299629;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.9:13667458 chr09:013667458 0 W/13667458-13667458 FN939-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN939-S.SNP.9:13667464 chr09:013667464 0 W/13667464-13667464 FN939-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2639-S.SNP.9:13673997 chr09:013673997 0 W/13673997-13673997 FN2639-S SNP C -> T AC=2;AN=200;BQB=0.824505;DP=4596;DP4=2334,2004,35,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.58277e-29;MQSB=0.983976;RPB=0.777358;SGB=118.061;VDB=0.309276;EFF=INTRON(MODIFIER||||1775|LOC_Os09g23120|protein_coding|CODING|LOC_Os09g23120.1|2|1) FN3567-S.SNP.9:13675172 chr09:013675172 0 W/13675172-13675172 FN3567-S SNP C -> T AC=1;AN=188;BQB=0.533701;DP=3161;DP4=1647,1450,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.68899e-06;MQSB=0.893312;RPB=0.485918;SGB=18.4463;VDB=0.655596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P616S|1775|LOC_Os09g23120|protein_coding|CODING|LOC_Os09g23120.1|3|1) FN2536-S.SNP.9:13676660 chr09:013676660 0 W/13676660-13676660 FN2536-S SNP T -> G AC=1;AN=198;BQB=0.474317;DP=3838;DP4=1948,1584,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00104221;MQB=0.0140446;MQSB=0.0515025;RPB=0.463164;SGB=4.56404;VDB=0.939155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Gca|S1085A|1775|LOC_Os09g23120|protein_coding|CODING|LOC_Os09g23120.1|5|1) FN3591-S.SNP.9:13680208 chr09:013680208 0 W/13680208-13680208 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.474155;DP=2657;DP4=1219,1360,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.27603e-07;MQSB=0.619191;RPB=0.983112;SGB=36.2493;VDB=0.633915;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E486|702|LOC_Os09g23130|protein_coding|CODING|LOC_Os09g23130.1|4|1) FN4164-S.SNP.9:13681634 chr09:013681634 0 W/13681634-13681634 FN4164-S SNP C -> A AC=2;AN=170;BQB=0.975957;DP=2432;DP4=1163,1186,13,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.11988e-16;MQSB=0.944635;RPB=0.610435;SGB=86.5178;VDB=0.0211312;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A89S|702|LOC_Os09g23130|protein_coding|CODING|LOC_Os09g23130.1|1|1) FN3762-S.SNP.9:13686570 chr09:013686570 0 W/13686570-13686570 FN3762-S SNP T -> A AC=1;AN=190;BQB=0.933879;DP=2416;DP4=1119,1222,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.48122e-05;MQSB=0.993133;RPB=0.543964;SGB=35.4339;VDB=0.727644;EFF=INTERGENIC(MODIFIER||||||||||1) FN1001-S.SNP.9:13704891 chr09:013704891 0 W/13704891-13704891 FN1001-S Single Base Substitution G-A INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3769-S.SNP.9:13705080 chr09:013705080 0 W/13705080-13705080 FN3769-S SNP C -> T AC=1;AN=190;BQB=0.746648;DP=2750;DP4=1377,1280,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16455e-05;MQSB=0.903099;RPB=0.796547;SGB=49.0954;VDB=0.0427166;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.9:13722277 chr09:013722277 0 W/13722277-13722277 FN1175-S Single Base Substitution C-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN185-2_3_4.SNP.9:13726083 chr09:013726083 0 W/13726083-13726083 FN185-2_3_4 SNP T -> C AC=1;AN=188;BQB=0.00547793;DP=2931;DP4=1295,1575,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00137392;MQSB=0.807813;RPB=0.958253;SGB=-135.516;VDB=0.764317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.9:13727631 chr09:013727631 0 W/13727631-13727631 FN1415-S Single Base Substitution C-G INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN-220.SNP.9:13732507 chr09:013732507 0 W/13732507-13732507 FN-220 Single Base Substitution G-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN726-S.SNP.9:13735406 chr09:013735406 0 W/13735406-13735406 FN726-S Single Base Substitution G-A INTERGENIC HOMO SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN526-S.SNP.9:13736669 chr09:013736669 0 W/13736669-13736669 FN526-S Single Base Substitution C-T INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN443-S.SNP.9:13749395 chr09:013749395 0 W/13749395-13749395 FN443-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g23190 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN-151.SNP.9:13754419 chr09:013754419 0 W/13754419-13754419 FN-151 Single Base Substitution G-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1042-S.SNP.9:13754419 chr09:013754419 0 W/13754419-13754419 FN1042-S Single Base Substitution G-A INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2752-S.SNP.9:13755872 chr09:013755872 0 W/13755872-13755872 FN2752-S SNP T -> G AC=1;AN=200;BQB=0.999952;DP=5063;DP4=2498,2302,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.73902e-11;MQSB=0.838901;RPB=0.906186;SGB=11.0951;VDB=0.0837158;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.9:13756359 chr09:013756359 0 W/13756359-13756359 FN-289 Single Base Substitution C-T INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3823-S.SNP.9:13774309 chr09:013774309 0 W/13774309-13774309 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.899788;DP=2819;DP4=1324,1346,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84649e-08;MQSB=0.877696;RPB=0.708607;SGB=49.0954;VDB=0.323915;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.9:13778000 chr09:013778000 0 W/13778000-13778000 FN432-S Single Base Substitution C-T INTERGENIC HOMO SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN4043-S.SNP.9:13779042 chr09:013779042 0 W/13779042-13779042 FN4043-S SNP C -> G AC=1;AN=168;BQB=0.947277;DP=2202;DP4=1058,1076,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00221e-09;MQSB=0.945415;RPB=0.117687;SGB=27.0464;VDB=0.224409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.9:13779324 chr09:013779324 0 W/13779324-13779324 FN3667-S SNP A -> G AC=1;AN=190;BQB=0.93734;DP=2871;DP4=1467,1317,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.77129e-10;MQSB=0.999881;RPB=0.656914;SGB=67.3108;VDB=0.654918;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.9:13779584 chr09:013779584 0 W/13779584-13779584 FN3695-S SNP G -> A AC=2;AN=190;BQB=0.981481;DP=2870;DP4=1283,1391,14,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.6192e-17;MQSB=0.445196;RPB=0.0696597;SGB=140.173;VDB=0.61578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.9:13786841 chr09:013786841 0 W/13786841-13786841 FN1011-S Single Base Substitution C-T INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1008-S.SNP.9:13796478 chr09:013796478 0 W/13796478-13796478 FN1008-S Single Base Substitution T-C INTRON HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2300.SNP.9:13797702 chr09:013797702 0 W/13797702-13797702 FN2300 SNP C -> T AC=2;AN=192;BQB=0.560429;DP=4676;DP4=2211,2024,20,22;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000213858;MQB=3.4264e-17;MQSB=0.0198178;RPB=0.769427;SGB=46.4635;VDB=0.350727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.9:13797949 chr09:013797949 0 W/13797949-13797949 FN3780-S SNP T -> G AC=2;AN=190;BQB=0.898055;DP=2935;DP4=1333,1531,12,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000340716;MQB=1.28344e-11;MQSB=0.000693689;RPB=0.878355;SGB=68.0854;VDB=0.284248;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.9:13801149 chr09:013801149 0 W/13801149-13801149 FN-195 Single Base Substitution A-G INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN-172.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN-172 Single Base Substitution C-G INTRON HOMO SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1026-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1026-S Single Base Substitution C-G INTRON HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1175-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1175-S Single Base Substitution C-G INTRON HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1222-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1222-S Single Base Substitution C-G INTRON HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1264-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1264-S Single Base Substitution C-G INTRON HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1320-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1320-S Single Base Substitution C-G INTRON HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1355-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1355-S Single Base Substitution C-G INTRON HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1415-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1415-S Single Base Substitution C-G INTRON Homo SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1514-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN1514-S Single Base Substitution C-G INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2125-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN2125-S SNP C -> G AC=2;AN=168;BQB=0.986644;DP=3041;DP4=2106,885,22,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=4.31834e-12;MQSB=0.968744;RPB=0.999997;SGB=65.9394;VDB=0.356889;EFF=INTRON(MODIFIER||||235|LOC_Os09g23260|protein_coding|CODING|LOC_Os09g23260.1|1|1) FN3933-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN3933-S SNP C -> G AC=1;AN=158;BQB=0.900563;DP=2271;DP4=1267,905,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=6.18691e-06;MQSB=0.998526;RPB=0.964304;SGB=34.0735;VDB=0.488008;EFF=INTRON(MODIFIER||||235|LOC_Os09g23260|protein_coding|CODING|LOC_Os09g23260.1|1|1) FN4009-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN4009-S SNP C -> G AC=1;AN=168;BQB=0.895287;DP=2170;DP4=1353,730,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=6.48947e-05;MQSB=0.976552;RPB=0.981495;SGB=34.4498;VDB=0.521248;EFF=INTRON(MODIFIER||||235|LOC_Os09g23260|protein_coding|CODING|LOC_Os09g23260.1|1|1) FN508-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN508-S Single Base Substitution C-G INTRON HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN618-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN618-S Single Base Substitution C-G INTRON HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN887-S.SNP.9:13805119 chr09:013805119 0 W/13805119-13805119 FN887-S Single Base Substitution C-G INTRON HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2329.SNP.9:13809891 chr09:013809891 0 W/13809891-13809891 FN2329 SNP A -> T AC=1;AN=192;BQB=0.728463;DP=4836;DP4=2065,2440,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.7097e-17;MQSB=0.999663;RPB=0.990777;SGB=62.2505;VDB=0.250121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.9:13812964 chr09:013812964 0 W/13812964-13812964 FN3767-S SNP T -> C AC=2;AN=190;BQB=0.71947;DP=2247;DP4=1196,865,8,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000445038;MQB=2.59393e-09;MQSB=0.99677;RPB=0.941685;SGB=58.2031;VDB=0.328077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.9:13819272 chr09:013819272 0 W/13819272-13819272 FN3354-S SNP A -> G AC=1;AN=184;BQB=0.938719;DP=2605;DP4=1201,1329,10,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66105e-07;MQSB=0.991643;RPB=0.255426;SGB=44.2207;VDB=0.373797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.9:13827511 chr09:013827511 0 W/13827511-13827511 FN2373 SNP T -> C AC=1;AN=192;BQB=0.49602;DP=5051;DP4=2538,2217,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.89306e-14;MQSB=0.880888;RPB=0.215907;SGB=19.8696;VDB=0.206335;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.9:13829538 chr09:013829538 0 W/13829538-13829538 FN1357-S Single Base Substitution G-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2687-S.SNP.9:13833451 chr09:013833451 0 W/13833451-13833451 FN2687-S SNP G -> A AC=2;AN=200;BQB=0.94528;DP=5005;DP4=2600,2179,16,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.10812e-18;MQSB=0.996764;RPB=0.976479;SGB=137.158;VDB=0.267173;EFF=UTR_3_PRIME(MODIFIER||120||246|LOC_Os09g23300|protein_coding|CODING|LOC_Os09g23300.1|4|1) FN1737-S.SNP.9:13835888 chr09:013835888 0 W/13835888-13835888 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.113609;DP=2002;DP4=1360,607,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.67445e-08;MQSB=0.728505;RPB=0.542123;SGB=-12.8266;VDB=0.662764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1027-S.SNP.9:13838596 chr09:013838596 0 W/13838596-13838596 FN1027-S Single Base Substitution G-A INTRON HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2297.SNP.9:13838849 chr09:013838849 0 W/13838849-13838849 FN2297 SNP G -> T AC=1;AN=192;BQB=0.618331;DP=4732;DP4=2107,2274,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.61217e-06;MQSB=0.580767;RPB=0.851743;SGB=-2.03126;VDB=0.00484311;EFF=INTRON(MODIFIER||||966|LOC_Os09g23310|protein_coding|CODING|LOC_Os09g23310.1|2|1) FN-170.SNP.9:13838883 chr09:013838883 0 W/13838883-13838883 FN-170 Single Base Substitution G-A INTRON HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-325.SNP.9:13840611 chr09:013840611 0 W/13840611-13840611 FN-325 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1284-S.SNP.9:13844495 chr09:013844495 0 W/13844495-13844495 FN1284-S Single Base Substitution G-A INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2489.SNP.9:13846449 chr09:013846449 0 W/13846449-13846449 FN2489 SNP A -> T AC=2;AN=200;BQB=0.805717;DP=5127;DP4=2265,2594,21,29;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.0335479;MQB=0.91581;MQSB=1.46412e-20;RPB=0.756441;SGB=170.056;VDB=0.208408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.9:13850073 chr09:013850073 0 W/13850073-13850073 FN3530-S SNP G -> T AC=1;AN=188;BQB=0.0420627;DP=3053;DP4=1561,1418,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.56903e-05;MQSB=0.999561;RPB=0.517981;SGB=39.5276;VDB=0.99468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.9:13859577 chr09:013859577 0 W/13859577-13859577 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.902121;DP=2512;DP4=1379,1072,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000231467;MQSB=0.997288;RPB=0.920231;SGB=30.6558;VDB=0.183821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.9:13866239 chr09:013866239 0 W/13866239-13866239 FN-169 Single Base Substitution C-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN_N1-119-1.SNP.9:13874734 chr09:013874734 0 W/13874734-13874734 FN_N1-119-1 Single Base Substitution C-T Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN_822-5-1.SNP.9:13874824 chr09:013874824 0 W/13874824-13874824 FN_822-5-1 Single Base Substitution A-T Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2378.SNP.9:13874931 chr09:013874931 0 W/13874931-13874931 FN2378 SNP T -> A AC=1;AN=192;BQB=0.737855;DP=4819;DP4=2350,2248,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.29349e-19;MQSB=0.933078;RPB=0.245876;SGB=75.0722;VDB=0.771203;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.9:13885642 chr09:013885642 0 W/13885642-13885642 FN1219-S Single Base Substitution A-G INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2560-S.SNP.9:13887073 chr09:013887073 0 W/13887073-13887073 FN2560-S SNP G -> T AC=1;AN=198;BQB=0.109075;DP=4051;DP4=2105,1771,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.37104e-05;MQSB=0.884724;RPB=0.413189;SGB=25.7687;VDB=0.740471;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.9:13889881 chr09:013889881 0 W/13889881-13889881 FN851-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN4069-S.SNP.9:13898603 chr09:013898603 0 W/13898603-13898603 FN4069-S SNP A -> G AC=1;AN=182;BQB=0.89459;DP=2929;DP4=1600,1231,15,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08906e-15;MQSB=0.993837;RPB=0.0219163;SGB=107.263;VDB=0.0845203;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.9:13898932 chr09:013898932 0 W/13898932-13898932 FN1338-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4025-S.SNP.9:13900419 chr09:013900419 0 W/13900419-13900419 FN4025-S SNP G -> A AC=2;AN=168;BQB=0.995803;DP=2512;DP4=1262,1150,8,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.16806e-11;MQSB=0.975024;RPB=0.9702;SGB=51.902;VDB=0.948104;EFF=INTERGENIC(MODIFIER||||||||||1) FN1212-S.SNP.9:13901185 chr09:013901185 0 W/13901185-13901185 FN1212-S Single Base Substitution G-A INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1079-S.SNP.9:13909886 chr09:013909886 0 W/13909886-13909886 FN1079-S Single Base Substitution G-A INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN2351.SNP.9:13910363 chr09:013910363 0 W/13910363-13910363 FN2351 SNP A -> T AC=1;AN=192;BQB=0.376447;DP=4273;DP4=1690,2315,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000702083;MQB=0.000122035;MQSB=0.0140147;RPB=0.763158;SGB=57.6018;VDB=0.50929;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.9:13924717 chr09:013924717 0 W/13924717-13924717 FN923-S Single Base Substitution T-G INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN1254-S.SNP.9:13928224 chr09:013928224 0 W/13928224-13928224 FN1254-S Single Base Substitution A-G INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN-246.SNP.9:13937965 chr09:013937965 0 W/13937965-13937965 FN-246 Single Base Substitution A-G INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN-372.SNP.9:13938408 chr09:013938408 0 W/13938408-13938408 FN-372 Single Base Substitution C-T INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-372.SNP.9:13938409 chr09:013938409 0 W/13938409-13938409 FN-372 Single Base Substitution A-T INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2142-S.SNP.9:13945952 chr09:013945952 0 W/13945952-13945952 FN2142-S SNP A -> G AC=1;AN=168;BQB=0.0070697;DP=2912;DP4=1518,1341,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.61593e-07;MQSB=0.942643;RPB=0.837887;SGB=-40.6433;VDB=0.521567;EFF=INTRON(MODIFIER||||191|LOC_Os09g23460|protein_coding|CODING|LOC_Os09g23460.1|1|1) FN1472-S.SNP.9:13946838 chr09:013946838 0 W/13946838-13946838 FN1472-S Single Base Substitution C-T INTERGENIC Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN-139.SNP.9:13950232 chr09:013950232 0 W/13950232-13950232 FN-139 Single Base Substitution G-A INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1625-S.SNP.9:13978047 chr09:013978047 0 W/13978047-13978047 FN1625-S Single Base Substitution T-C INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:13978047 chr09:013978047 0 W/13978047-13978047 FN1626-S SNP T -> C AC=1;AN=188;BQB=0.665869;DP=3460;DP4=1460,1956,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=3.85277e-06;MQSB=0.00118191;RPB=0.47254;SGB=43.8792;VDB=0.250316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.9:13986173 chr09:013986173 0 W/13986173-13986173 FN2315 SNP G -> A AC=1;AN=192;BQB=0.090889;DP=4221;DP4=1980,1958,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.46902e-08;MQSB=0.522324;RPB=0.697385;SGB=46.9087;VDB=0.593111;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.9:13986314 chr09:013986314 0 W/13986314-13986314 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN4039-S.SNP.9:13987649 chr09:013987649 0 W/13987649-13987649 FN4039-S SNP T -> C AC=1;AN=168;BQB=0.874071;DP=3106;DP4=1659,1295,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.55198e-07;MQSB=0.947474;RPB=0.427793;SGB=47.7421;VDB=0.33366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S243G|436|LOC_Os09g23540|protein_coding|CODING|LOC_Os09g23540.1|2|1) FN2241-S.SNP.9:14003199 chr09:014003199 0 W/14003199-14003199 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.897247;DP=5134;DP4=2506,2298,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9518e-06;MQSB=0.820796;RPB=0.8617;SGB=39.9877;VDB=0.456924;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.9:14010406 chr09:014010406 0 W/14010406-14010406 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.285517;DP=3719;DP4=2020,1468,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29614e-06;MQSB=0.229373;RPB=0.0850079;SGB=5.28054;VDB=0.553153;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.9:14028624 chr09:014028624 0 W/14028624-14028624 FN2347 SNP T -> C AC=1;AN=192;BQB=0.518165;DP=5363;DP4=2653,2385,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23468e-16;MQSB=0.992545;RPB=0.984549;SGB=122.24;VDB=0.855263;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.9:14034660 chr09:014034660 0 W/14034660-14034660 FN879-S Single Base Substitution C-T INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN943-S.SNP.9:14036246 chr09:014036246 0 W/14036246-14036246 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN3862-S.SNP.9:14044108 chr09:014044108 0 W/14044108-14044108 FN3862-S SNP T -> A AC=2;AN=158;BQB=0.682267;DP=2694;DP4=1099,1489,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.00599e-14;MQSB=0.842784;RPB=0.751202;SGB=77.8763;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1250-S.SNP.9:14073738 chr09:014073738 0 W/14073738-14073738 FN1250-S Single Base Substitution C-T INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN373-S.SNP.9:14075924 chr09:014075924 0 W/14075924-14075924 FN373-S Single Base Substitution G-A INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN790-S.SNP.9:14079233 chr09:014079233 0 W/14079233-14079233 FN790-S Single Base Substitution C-A INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN-403.SNP.9:14079646 chr09:014079646 0 W/14079646-14079646 FN-403 Single Base Substitution G-A INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN4138-S.SNP.9:14088255 chr09:014088255 0 W/14088255-14088255 FN4138-S SNP G -> A AC=1;AN=170;BQB=0.415629;DP=2434;DP4=1234,1112,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00130286;MQSB=0.962806;RPB=0.33079;SGB=38.987;VDB=0.830559;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.9:14090251 chr09:014090251 0 W/14090251-14090251 FN764-S Single Base Substitution G-A INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-287.SNP.9:14090338 chr09:014090338 0 W/14090338-14090338 FN-287 Single Base Substitution T-C INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN1031-S.SNP.9:14092171 chr09:014092171 0 W/14092171-14092171 FN1031-S Single Base Substitution T-C INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3501-S.SNP.9:14098477 chr09:014098477 0 W/14098477-14098477 FN3501-S SNP A -> G AC=2;AN=188;BQB=0.992102;DP=2853;DP4=1391,1371,11,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.10654e-08;MQSB=0.172242;RPB=0.583322;SGB=62.6088;VDB=0.270453;EFF=INTRON(MODIFIER||||295|LOC_Os09g23720|protein_coding|CODING|LOC_Os09g23720.1|5|1) W416-6-1.SNP.9:14109182 chr09:014109182 0 W/14109182-14109182 W416-6-1 Single Base Substitution A-C INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN3970-S.SNP.9:14109855 chr09:014109855 0 W/14109855-14109855 FN3970-S SNP T -> C AC=1;AN=168;BQB=0.998836;DP=1885;DP4=850,875,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.24941e-07;MQSB=0.148552;RPB=0.988281;SGB=61.0344;VDB=0.876649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.9:14113331 chr09:014113331 0 W/14113331-14113331 FN2703-S SNP A -> C AC=1;AN=200;BQB=0.441668;DP=5133;DP4=2383,2516,23,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11525e-26;MQSB=0.98998;RPB=0.917579;SGB=210.84;VDB=0.754436;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Gtt|F1186V|1633|LOC_Os09g23740|protein_coding|CODING|LOC_Os09g23740.1|8|1) FN1014-S.SNP.9:14118787 chr09:014118787 0 W/14118787-14118787 FN1014-S Single Base Substitution G-A INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2481.SNP.9:14120833 chr09:014120833 0 W/14120833-14120833 FN2481 SNP C -> T AC=1;AN=198;BQB=0.511721;DP=4100;DP4=1800,2119,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.51443e-06;MQSB=0.71209;RPB=0.834033;SGB=29.4541;VDB=0.680085;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.9:14121956 chr09:014121956 0 W/14121956-14121956 FN467-S Single Base Substitution G-C INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3998-S.SNP.9:14129024 chr09:014129024 0 W/14129024-14129024 FN3998-S SNP C -> T AC=1;AN=168;BQB=0.982107;DP=1996;DP4=690,1218,3,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0018123;MQSB=0.800787;RPB=0.846686;SGB=25.5891;VDB=0.0490877;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.9:14129349 chr09:014129349 0 W/14129349-14129349 FN4031-S SNP C -> A AC=2;AN=168;BQB=0.68061;DP=1633;DP4=503,1002,17,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.55534e-20;MQSB=0.931974;RPB=0.92015;SGB=162.037;VDB=0.652042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.9:14133259 chr09:014133259 0 W/14133259-14133259 FN3467-S SNP G -> A AC=1;AN=184;BQB=0.99972;DP=3645;DP4=1621,1886,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.29225e-14;MQSB=0.508486;RPB=0.983036;SGB=85.0529;VDB=0.157547;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.9:14135354 chr09:014135354 0 W/14135354-14135354 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1394-S.SNP.9:14135575 chr09:014135575 0 W/14135575-14135575 FN1394-S Single Base Substitution A-G INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2302.SNP.9:14138020 chr09:014138020 0 W/14138020-14138020 FN2302 SNP T -> C AC=1;AN=192;BQB=0.978256;DP=5074;DP4=2663,2148,17,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.30213e-19;MQSB=0.907653;RPB=0.890016;SGB=103.938;VDB=0.507757;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.9:14139870 chr09:014139870 0 W/14139870-14139870 FN3524-S SNP G -> A AC=1;AN=188;BQB=0.998406;DP=3055;DP4=1606,1368,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00163666;MQB=1.57364e-08;MQSB=0.999946;RPB=0.331883;SGB=67.1521;VDB=0.41217;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.9:14149779 chr09:014149779 0 W/14149779-14149779 FN1695-S SNP A -> T AC=1;AN=188;BQB=0.206486;DP=2862;DP4=1507,1325,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86004e-05;MQSB=0.994095;RPB=0.842989;SGB=-13.9132;VDB=0.735046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.9:14152487 chr09:014152487 0 W/14152487-14152487 FN3901-S SNP G -> T AC=1;AN=158;BQB=0.947989;DP=2094;DP4=991,1028,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.87786e-05;MQSB=0.84948;RPB=0.772027;SGB=29.5899;VDB=0.267469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.9:14167362 chr09:014167362 0 W/14167362-14167362 FN2289 SNP G -> A AC=1;AN=192;BQB=0.94845;DP=4517;DP4=1886,2361,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.48911e-13;MQSB=0.985426;RPB=0.48989;SGB=78.9878;VDB=0.507257;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.9:14167450 chr09:014167450 0 W/14167450-14167450 FN_935-1 Single Base Substitution G-C HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3381-S.SNP.9:14181720 chr09:014181720 0 W/14181720-14181720 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.958618;DP=3025;DP4=1570,1366,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.419504;MQB=0.113057;MQSB=0.00143248;RPB=0.487407;SGB=107.526;VDB=0.395814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.9:14181994 chr09:014181994 0 W/14181994-14181994 FN2107-S SNP G -> A AC=1;AN=168;BQB=0.197423;DP=2605;DP4=1135,1443,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=18;MQ0F=0.440691;MQB=0.182336;MQSB=0;RPB=0.602614;SGB=-38.3665;VDB=0.281828;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.9:14188553 chr09:014188553 0 W/14188553-14188553 FN576-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g23810 retrotransposon protein, putative, unclassified SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1462-S.SNP.9:14189122 chr09:014189122 0 W/14189122-14189122 FN1462-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g23810 retrotransposon protein, putative, unclassified SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2204-S.SNP.9:14191705 chr09:014191705 0 W/14191705-14191705 FN2204-S SNP G -> T AC=1;AN=190;BQB=0.998773;DP=4646;DP4=2138,2165,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.40048e-14;MQSB=0.983941;RPB=0.870499;SGB=-42.1241;VDB=0.254292;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.9:14194468 chr09:014194468 0 W/14194468-14194468 FN4031-S SNP G -> A AC=2;AN=168;BQB=0.894769;DP=2222;DP4=918,1212,19,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.68984e-15;MQSB=0.915119;RPB=0.915034;SGB=96.5026;VDB=0.875001;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L499|535|LOC_Os09g23820|protein_coding|CODING|LOC_Os09g23820.1|5|1) FN1382-S.SNP.9:14198241 chr09:014198241 0 W/14198241-14198241 FN1382-S Single Base Substitution G-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2104-S.SNP.9:14200828 chr09:014200828 0 W/14200828-14200828 FN2104-S SNP C -> T AC=1;AN=168;BQB=0.748849;DP=3612;DP4=1744,1829,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85757e-09;MQSB=0.955487;RPB=0.994429;SGB=-63.3606;VDB=0.020937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.9:14211253 chr09:014211253 0 W/14211253-14211253 FN1045-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g23840 retrotransposon protein, putative, unclassified SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1585-S.SNP.9:14221750 chr09:014221750 0 W/14221750-14221750 FN1585-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g23850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN901-S.SNP.9:14222759 chr09:014222759 0 W/14222759-14222759 FN901-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g23850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN2612-S.SNP.9:14223887 chr09:014223887 0 W/14223887-14223887 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.994915;DP=3886;DP4=2006,1575,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.31296e-09;MQSB=0.798307;RPB=0.862092;SGB=67.9293;VDB=0.0686649;EFF=INTRON(MODIFIER||||1085|LOC_Os09g23850|protein_coding|CODING|LOC_Os09g23850.1|1|1) FN1633-S.SNP.9:14224490 chr09:014224490 0 W/14224490-14224490 FN1633-S Single Base Substitution G-C INTERGENIC Homo SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3903-S.SNP.9:14224913 chr09:014224913 0 W/14224913-14224913 FN3903-S SNP A -> T AC=1;AN=158;BQB=0.996414;DP=2722;DP4=1316,1314,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0124908;MQB=0.197458;MQSB=0.00702495;RPB=0.953516;SGB=40.8124;VDB=0.221632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.9:14230785 chr09:014230785 0 W/14230785-14230785 FN2412 SNP G -> A AC=1;AN=200;BQB=0.825188;DP=5321;DP4=2510,2476,8,9;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0531855;MQB=0.806412;MQSB=3.40161e-08;RPB=0.458029;SGB=51.0851;VDB=0.376003;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.9:14242011 chr09:014242011 0 W/14242011-14242011 FN-258 Single Base Substitution C-T INTRON HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN863-S.SNP.9:14249636 chr09:014249636 0 W/14249636-14249636 FN863-S Single Base Substitution G-A INTERGENIC HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN998-S.SNP.9:14254699 chr09:014254699 0 W/14254699-14254699 FN998-S Single Base Substitution T-C INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3800-S.SNP.9:14260258 chr09:014260258 0 W/14260258-14260258 FN3800-S SNP C -> T AC=1;AN=190;BQB=0.25482;DP=2018;DP4=780,951,4,15;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.200694;MQB=0.700471;MQSB=0;RPB=0.381559;SGB=10.3266;VDB=0.681326;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.9:14283456 chr09:014283456 0 W/14283456-14283456 FN916-S Single Base Substitution C-T INTRON HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2496.SNP.9:14283565 chr09:014283565 0 W/14283565-14283565 FN2496 SNP C -> A AC=1;AN=200;BQB=0.982998;DP=4694;DP4=2363,2021,10,8;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.310396;MQB=0.730968;MQSB=0;RPB=0.335507;SGB=-13.1102;VDB=0.0618963;EFF=INTRON(MODIFIER||||226|LOC_Os09g23980|protein_coding|CODING|LOC_Os09g23980.1|3|1) FN2696-S.SNP.9:14289727 chr09:014289727 0 W/14289727-14289727 FN2696-S SNP G -> T AC=1;AN=200;BQB=0.836949;DP=4752;DP4=2396,2118,5,12;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.308291;MQB=0.556555;MQSB=0;RPB=0.766448;SGB=7.88476;VDB=0.606362;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A99|140|LOC_Os09g23990|protein_coding|CODING|LOC_Os09g23990.1|2|1) FN1689-S.SNP.9:14289902 chr09:014289902 0 W/14289902-14289902 FN1689-S SNP A -> G AC=1;AN=188;BQB=0.957946;DP=2355;DP4=1231,1101,9,1;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.147771;MQB=0.42929;MQSB=1.65791e-29;RPB=0.988113;SGB=25.3545;VDB=0.237602;EFF=INTRON(MODIFIER||||140|LOC_Os09g23990|protein_coding|CODING|LOC_Os09g23990.1|2|1) FN3543-S.SNP.9:14307589 chr09:014307589 0 W/14307589-14307589 FN3543-S SNP C -> T AC=2;AN=188;BQB=0.934516;DP=2623;DP4=1387,1175,9,6;HOB=0.0210502;ICB=0.494738;MQ=32;MQ0F=0.069005;MQB=0.250277;MQSB=0;RPB=0.863697;SGB=62.6088;VDB=0.707795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G216E|573|LOC_Os09g24050|protein_coding|CODING|LOC_Os09g24050.1|2|1) FN1680-S.SNP.9:14308998 chr09:014308998 0 W/14308998-14308998 FN1680-S SNP G -> A AC=1;AN=186;BQB=0.153616;DP=1055;DP4=415,587,7,4;HOB=5.78101e-05;ICB=0.000116242;MQ=37;MQ0F=0.000947867;MQB=0.998738;MQSB=0.377715;RPB=0.829808;SGB=28.8977;VDB=0.984446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.9:14311247 chr09:014311247 0 W/14311247-14311247 FN2580-S SNP T -> A AC=1;AN=198;BQB=0.756871;DP=3949;DP4=1732,2017,6,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00860977;MQB=2.075e-10;MQSB=0.805161;RPB=0.461001;SGB=95.5;VDB=0.832501;EFF=INTRON(MODIFIER||||276|LOC_Os09g24060|protein_coding|CODING|LOC_Os09g24060.1|3|1) FN925-S.SNP.9:14311686 chr09:014311686 0 W/14311686-14311686 FN925-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2085-S.SNP.9:14324879 chr09:014324879 0 W/14324879-14324879 FN2085-S SNP G -> C AC=2;AN=168;BQB=0.769784;DP=2295;DP4=1559,689,17,9;HOB=0.0235261;ICB=0.494119;MQ=31;MQ0F=0.176035;MQB=0.864687;MQSB=0;RPB=0.623431;SGB=18.4989;VDB=0.257813;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.9:14325740 chr09:014325740 0 W/14325740-14325740 FN441-S Single Base Substitution A-T INTERGENIC HOMO SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3976-S.SNP.9:14334530 chr09:014334530 0 W/14334530-14334530 FN3976-S SNP G -> A AC=1;AN=168;BQB=0.98985;DP=1851;DP4=792,933,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46741e-06;MQSB=0.938898;RPB=0.897587;SGB=52.1728;VDB=0.613531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.9:14334949 chr09:014334949 0 W/14334949-14334949 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2316.SNP.9:14335029 chr09:014335029 0 W/14335029-14335029 FN2316 SNP C -> T AC=2;AN=192;BQB=0.498453;DP=4372;DP4=1930,2058,25,19;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0.118939;MQB=0.132098;MQSB=0;RPB=0.273429;SGB=49.5922;VDB=0.501568;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.9:14346924 chr09:014346924 0 W/14346924-14346924 FN-167 Single Base Substitution G-C INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-401.SNP.9:14347814 chr09:014347814 0 W/14347814-14347814 FN-401 Single Base Substitution G-A INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN3945-S.SNP.9:14350170 chr09:014350170 0 W/14350170-14350170 FN3945-S SNP G -> T AC=1;AN=168;BQB=0.83842;DP=2727;DP4=1368,1247,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.06224e-09;MQSB=0.99618;RPB=0.427926;SGB=45.0404;VDB=0.60711;EFF=INTERGENIC(MODIFIER||||||||||1) FN574-S.SNP.9:14352625 chr09:014352625 0 W/14352625-14352625 FN574-S Single Base Substitution C-T INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN-77.SNP.9:14353132 chr09:014353132 0 W/14353132-14353132 FN-77 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g24170 expressed protein SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN-399.SNP.9:14355684 chr09:014355684 0 W/14355684-14355684 FN-399 Single Base Substitution A-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2129-S.SNP.9:14356202 chr09:014356202 0 W/14356202-14356202 FN2129-S SNP A -> G AC=1;AN=168;BQB=0.91501;DP=4315;DP4=2230,2030,19,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.61209e-17;MQSB=0.995092;RPB=0.611074;SGB=37.0995;VDB=0.0454173;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.9:14361287 chr09:014361287 0 W/14361287-14361287 FN1089-S Single Base Substitution A-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2676-S.SNP.9:14370664 chr09:014370664 0 W/14370664-14370664 FN2676-S SNP T -> C AC=1;AN=200;BQB=0.963875;DP=5046;DP4=2556,2136,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.88735e-12;MQSB=0.99793;RPB=0.899406;SGB=-35.7104;VDB=0.354859;EFF=INTRON(MODIFIER||||670|LOC_Os09g24210|protein_coding|CODING|LOC_Os09g24210.1|6|1) FN501-S.SNP.9:14370885 chr09:014370885 0 W/14370885-14370885 FN501-S Single Base Substitution T-A INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN-51.SNP.9:14372674 chr09:014372674 0 W/14372674-14372674 FN-51 Single Base Substitution C-T INTRON HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2479.SNP.9:14374182 chr09:014374182 0 W/14374182-14374182 FN2479 SNP C -> A AC=1;AN=200;BQB=0.000767245;DP=4409;DP4=2033,2083,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.66056e-09;MQSB=0.999642;RPB=0.999194;SGB=45.1159;VDB=0.924515;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.9:14379538 chr09:014379538 0 W/14379538-14379538 FN950-S Single Base Substitution C-T INTRON HOMO SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2628-S.SNP.9:14382993 chr09:014382993 0 W/14382993-14382993 FN2628-S SNP T -> A AC=1;AN=200;BQB=0.204559;DP=4938;DP4=2346,2338,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.01512e-08;MQSB=0.978008;RPB=0.490109;SGB=-55.5209;VDB=0.54149;EFF=INTRON(MODIFIER||||1276|LOC_Os09g24220|protein_coding|CODING|LOC_Os09g24220.1|11|1) FN3809-S.SNP.9:14383516 chr09:014383516 0 W/14383516-14383516 FN3809-S SNP G -> A AC=2;AN=190;BQB=0.849159;DP=2329;DP4=1252,985,15,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.33494e-12;MQSB=0.999993;RPB=0.581523;SGB=99.1879;VDB=0.601347;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G766D|1276|LOC_Os09g24220|protein_coding|CODING|LOC_Os09g24220.1|12|1) FN573-S.SNP.9:14398884 chr09:014398884 0 W/14398884-14398884 FN573-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g24250 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN573-S.SNP.9:14398885 chr09:014398885 0 W/14398885-14398885 FN573-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1704-S.SNP.9:14407758 chr09:014407758 0 W/14407758-14407758 FN1704-S SNP G -> A AC=1;AN=188;BQB=0.985172;DP=3544;DP4=1695,1819,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.99199e-12;MQSB=0.95727;RPB=0.870235;SGB=60.7873;VDB=0.324826;EFF=INTRON(MODIFIER||||993|LOC_Os09g24260|protein_coding|CODING|LOC_Os09g24260.1|6|1) FN-399.SNP.9:14414829 chr09:014414829 0 W/14414829-14414829 FN-399 Single Base Substitution G-A INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. 707-5.SNP.9:14425373 chr09:014425373 0 W/14425373-14425373 707-5 Single Base Substitution G-A INTRON Homo SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. FN-217.SNP.9:14426329 chr09:014426329 0 W/14426329-14426329 FN-217 Single Base Substitution C-T INTRON HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2559-S.SNP.9:14427423 chr09:014427423 0 W/14427423-14427423 FN2559-S SNP A -> C AC=1;AN=198;BQB=0.959981;DP=4233;DP4=2015,2002,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.86023e-06;MQSB=0.927976;RPB=0.463752;SGB=35.7638;VDB=0.511505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.9:14427476 chr09:014427476 0 W/14427476-14427476 FN1314-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN3601-S.SNP.9:14427476 chr09:014427476 0 W/14427476-14427476 FN3601-S SNP T -> G AC=1;AN=190;BQB=0.997805;DP=3210;DP4=1677,1401,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.95051e-05;MQSB=0.935813;RPB=0.894845;SGB=49.0954;VDB=0.743718;EFF=INTERGENIC(MODIFIER||||||||||1) FN506-S.SNP.9:14427476 chr09:014427476 0 W/14427476-14427476 FN506-S Single Base Substitution T-G INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN1214-S.SNP.9:14433956 chr09:014433956 0 W/14433956-14433956 FN1214-S Single Base Substitution T-C INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN450-S.SNP.9:14439781 chr09:014439781 0 W/14439781-14439781 FN450-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1473-S.SNP.9:14445008 chr09:014445008 0 W/14445008-14445008 FN1473-S Single Base Substitution C-T INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN-178.SNP.9:14451925 chr09:014451925 0 W/14451925-14451925 FN-178 Single Base Substitution C-T INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1414-S.SNP.9:14459576 chr09:014459576 0 W/14459576-14459576 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1299-S.SNP.9:14459956 chr09:014459956 0 W/14459956-14459956 FN1299-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2645-S.SNP.9:14461201 chr09:014461201 0 W/14461201-14461201 FN2645-S SNP T -> C AC=1;AN=200;BQB=0.3565;DP=2415;DP4=786,1404,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.22531e-07;MQSB=0.0710635;RPB=0.670634;SGB=9.48993;VDB=0.00309;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.9:14462264 chr09:014462264 0 W/14462264-14462264 FN3443-S SNP A -> G AC=1;AN=184;BQB=0.242444;DP=2792;DP4=1391,1337,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.47493e-05;MQSB=0.988696;RPB=0.262935;SGB=39.2697;VDB=0.810923;EFF=INTERGENIC(MODIFIER||||||||||1) FN4302-S.SNP.9:14464654 chr09:014464654 0 W/14464654-14464654 FN4302-S SNP T -> A AC=2;AN=170;BQB=0.838621;DP=2597;DP4=1321,1198,14,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.06324e-16;MQSB=0.770117;RPB=0.546082;SGB=127.84;VDB=0.227583;EFF=INTRON(MODIFIER||||453|LOC_Os09g24330|protein_coding|CODING|LOC_Os09g24330.1|1|1) FN-221.SNP.9:14466987 chr09:014466987 0 W/14466987-14466987 FN-221 Single Base Substitution C-T INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN-219.SNP.9:14474667 chr09:014474667 0 W/14474667-14474667 FN-219 Single Base Substitution G-T INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN_807-3-1.SNP.9:14478018 chr09:014478018 0 W/14478018-14478018 FN_807-3-1 Single Base Substitution T-A HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN1531-S.SNP.9:14478317 chr09:014478317 0 W/14478317-14478317 FN1531-S Single Base Substitution G-A INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2241-S.SNP.9:14512954 chr09:014512954 0 W/14512954-14512954 FN2241-S SNP T -> A AC=1;AN=188;BQB=0.864864;DP=2844;DP4=907,1574,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000703235;MQB=8.59928e-06;MQSB=9.12217e-06;RPB=0.771808;SGB=-14.8836;VDB=0.421008;EFF=INTERGENIC(MODIFIER||||||||||1) FN569-S.SNP.9:14517226 chr09:014517226 0 W/14517226-14517226 FN569-S Single Base Substitution G-A INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN654-S.SNP.9:14519952 chr09:014519952 0 W/14519952-14519952 FN654-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2257-S.SNP.9:14524612 chr09:014524612 0 W/14524612-14524612 FN2257-S SNP C -> A AC=1;AN=190;BQB=0.190494;DP=4929;DP4=2120,2495,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30311e-11;MQSB=0.568494;RPB=0.831835;SGB=117.403;VDB=0.0936856;EFF=INTRON(MODIFIER||||934|LOC_Os09g24420|protein_coding|CODING|LOC_Os09g24420.1|1|1) FN3801-S.SNP.9:14527410 chr09:014527410 0 W/14527410-14527410 FN3801-S SNP G -> A AC=1;AN=190;BQB=0.994894;DP=2804;DP4=1483,1202,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.33388e-07;MQSB=0.972542;RPB=0.836279;SGB=36.1006;VDB=0.741287;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.9:14528624 chr09:014528624 0 W/14528624-14528624 FN927-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g24430 expressed protein SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN927-S.SNP.9:14528626 chr09:014528626 0 W/14528626-14528626 FN927-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g24430 expressed protein SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN-137.SNP.9:14529718 chr09:014529718 0 W/14529718-14529718 FN-137 Single Base Substitution T-A INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2147-S.SNP.9:14530536 chr09:014530536 0 W/14530536-14530536 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.143744;DP=1903;DP4=678,1185,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00276515;MQSB=0.773723;RPB=0.987702;SGB=-18.3882;VDB=0.343845;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.9:14561129 chr09:014561129 0 W/14561129-14561129 FN448-S Single Base Substitution C-T INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3360-S.SNP.9:14570543 chr09:014570543 0 W/14570543-14570543 FN3360-S SNP A -> G AC=1;AN=184;BQB=0.979337;DP=2605;DP4=1384,1140,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.12821e-07;MQSB=0.995954;RPB=0.986323;SGB=44.2207;VDB=0.591503;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.9:14573237 chr09:014573237 0 W/14573237-14573237 FN-241 Single Base Substitution C-A INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-241.SNP.9:14573242 chr09:014573242 0 W/14573242-14573242 FN-241 Single Base Substitution A-C INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3933-S.SNP.9:14582184 chr09:014582184 0 W/14582184-14582184 FN3933-S SNP G -> A AC=1;AN=158;BQB=0.993017;DP=2582;DP4=1102,1358,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.22523e-06;MQSB=0.958607;RPB=0.377997;SGB=47.0672;VDB=0.0607873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.9:14584814 chr09:014584814 0 W/14584814-14584814 FN1384-S Single Base Substitution C-T INTRON HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1726-S.SNP.9:14586701 chr09:014586701 0 W/14586701-14586701 FN1726-S SNP G -> C AC=1;AN=188;BQB=0.710524;DP=2276;DP4=1114,1121,11,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.04845e-12;MQSB=0.980213;RPB=0.953299;SGB=19.4279;VDB=0.369709;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.9:14588709 chr09:014588709 0 W/14588709-14588709 FN3800-S SNP A -> T AC=2;AN=190;BQB=0.973903;DP=2632;DP4=1182,1333,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35598e-14;MQSB=0.623434;RPB=0.684374;SGB=75.1932;VDB=0.438004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.9:14588710 chr09:014588710 0 W/14588710-14588710 FN3800-S SNP G -> T AC=2;AN=190;BQB=0.927865;DP=2627;DP4=1195,1327,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.15842e-15;MQSB=0.635147;RPB=0.532057;SGB=99.1879;VDB=0.346882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.9:14588769 chr09:014588769 0 W/14588769-14588769 FN1014-S Single Base Substitution T-G INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2731-S.SNP.9:14589275 chr09:014589275 0 W/14589275-14589275 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.973679;DP=4437;DP4=2018,2272,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0394e-08;MQSB=0.994143;RPB=0.864552;SGB=54.2646;VDB=0.945228;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.9:14594674 chr09:014594674 0 W/14594674-14594674 FN-55 Single Base Substitution G-T INTERGENIC HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN3892-S.SNP.9:14594674 chr09:014594674 0 W/14594674-14594674 FN3892-S SNP G -> T AC=1;AN=158;BQB=0.871129;DP=2461;DP4=1363,1005,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.33808e-06;MQSB=0.972539;RPB=0.323757;SGB=51.4366;VDB=0.632065;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.9:14594674 chr09:014594674 0 W/14594674-14594674 FN855-S Single Base Substitution G-T INTERGENIC HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN1122-S.SNP.9:14598499 chr09:014598499 0 W/14598499-14598499 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2110-S.SNP.9:14599879 chr09:014599879 0 W/14599879-14599879 FN2110-S SNP G -> A AC=1;AN=168;BQB=0.000278294;DP=3822;DP4=1795,1993,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.86912e-06;MQSB=0.922023;RPB=0.896119;SGB=-66.4989;VDB=0.997411;EFF=INTRON(MODIFIER||||180|LOC_Os09g24500|protein_coding|CODING|LOC_Os09g24500.1|2|1) FN2681-S.SNP.9:14600167 chr09:014600167 0 W/14600167-14600167 FN2681-S SNP G -> T AC=1;AN=200;BQB=0.976462;DP=4872;DP4=2270,2390,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36668e-15;MQSB=0.991681;RPB=0.585845;SGB=123.342;VDB=0.358834;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.9:14601097 chr09:014601097 0 W/14601097-14601097 FN3553-S SNP T -> A AC=1;AN=188;BQB=0.927856;DP=2824;DP4=1413,1299,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08824e-06;MQSB=0.974007;RPB=0.709084;SGB=39.8925;VDB=0.501726;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.9:14614941 chr09:014614941 0 W/14614941-14614941 FN3567-S SNP T -> C AC=1;AN=188;BQB=0.960171;DP=2831;DP4=1197,1534,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21558e-08;MQSB=0.997193;RPB=0.872966;SGB=53.5223;VDB=0.647103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.9:14615496 chr09:014615496 0 W/14615496-14615496 FN3465-S SNP G -> A AC=1;AN=184;BQB=0.962284;DP=2015;DP4=602,1315,4,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.23671e-10;MQSB=0.755954;RPB=0.985554;SGB=84.9167;VDB=0.420476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.9:14621063 chr09:014621063 0 W/14621063-14621063 FN2660-S SNP G -> A AC=2;AN=200;BQB=0.259642;DP=5062;DP4=2630,2030,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.58592e-22;MQSB=0.793928;RPB=0.927811;SGB=123.188;VDB=0.888467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.9:14623894 chr09:014623894 0 W/14623894-14623894 FN2426 SNP C -> G AC=1;AN=200;BQB=0.838879;DP=4489;DP4=2176,1952,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54353e-14;MQSB=0.964945;RPB=0.984059;SGB=100.316;VDB=0.101097;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.9:14624507 chr09:014624507 0 W/14624507-14624507 FN4160-S SNP T -> G AC=2;AN=170;BQB=0.631056;DP=2381;DP4=1255,991,11,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.03154e-15;MQSB=0.887028;RPB=0.508088;SGB=127.84;VDB=0.0517113;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.9:14624644 chr09:014624644 0 W/14624644-14624644 FN1467-S Single Base Substitution A-G INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1097-S.SNP.9:14627992 chr09:014627992 0 W/14627992-14627992 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-44.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN-44 Single Base Substitution C-T INTERGENIC Homo SNo: 44, Mutant_ID: FN-44, Generation: M2, Mutations: 34, Genes: 25, Seed availability: Yes. FN1180-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN1180-S Single Base Substitution C-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1674-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN1674-S SNP C -> T AC=2;AN=188;BQB=0.946494;DP=3189;DP4=2106,1035,17,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62904e-11;MQSB=0.0935426;RPB=0.115738;SGB=-41.0182;VDB=0.170967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN2264-S SNP C -> T AC=2;AN=190;BQB=0.634241;DP=4798;DP4=2435,1943,9,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.17134e-06;MQSB=0.212938;RPB=0.924203;SGB=43.2083;VDB=0.884271;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN2310 SNP C -> T AC=2;AN=192;BQB=0.369563;DP=4792;DP4=2319,2077,40,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.64726e-35;MQSB=0.113985;RPB=0.35712;SGB=-57.1104;VDB=0.56052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2568-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN2568-S SNP C -> T AC=1;AN=198;BQB=0.494238;DP=4199;DP4=2097,1844,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.69264e-05;MQSB=0.477026;RPB=0.604863;SGB=1.37381;VDB=0.466289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.897027;DP=3158;DP4=1430,1632,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25745e-12;MQSB=0.477418;RPB=0.885679;SGB=70.9657;VDB=0.46786;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN4047-S SNP C -> T AC=2;AN=168;BQB=0.692012;DP=2649;DP4=1269,1272,15,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.36881e-12;MQSB=0.226786;RPB=0.998875;SGB=123.066;VDB=0.780877;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.9:14633705 chr09:014633705 0 W/14633705-14633705 FN849-S Single Base Substitution C-T INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN4224-S.SNP.9:14637578 chr09:014637578 0 W/14637578-14637578 FN4224-S SNP C -> T AC=1;AN=170;BQB=0.983043;DP=2508;DP4=1359,1061,12,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.53248e-12;MQSB=0.880479;RPB=0.811115;SGB=32.0972;VDB=0.497757;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.9:14641522 chr09:014641522 0 W/14641522-14641522 FN765-S Single Base Substitution A-G INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN2467.SNP.9:14643561 chr09:014643561 0 W/14643561-14643561 FN2467 SNP C -> T AC=1;AN=200;BQB=0.644015;DP=4783;DP4=2099,2242,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000627221;MQB=1.96215e-15;MQSB=0.595032;RPB=0.0926203;SGB=-40.8432;VDB=0.199797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.9:14644820 chr09:014644820 0 W/14644820-14644820 FN3596-S SNP C -> T AC=1;AN=188;BQB=0.959107;DP=3001;DP4=1614,1178,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.74771e-11;MQSB=0.131418;RPB=0.749848;SGB=53.7007;VDB=0.443079;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.9:14646587 chr09:014646587 0 W/14646587-14646587 FN-151 Single Base Substitution G-A INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN3288-S.SNP.9:14650514 chr09:014650514 0 W/14650514-14650514 FN3288-S SNP T -> A AC=2;AN=184;BQB=0.720247;DP=3497;DP4=1849,1488,15,14;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.000285959;MQB=3.11318e-06;MQSB=1.00937e-22;RPB=0.534848;SGB=58.5801;VDB=0.237098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.9:14650629 chr09:014650629 0 W/14650629-14650629 FN2457 SNP T -> A AC=1;AN=200;BQB=0.660011;DP=4796;DP4=2822,1715,9,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00208507;MQB=0.000430859;MQSB=2.64861e-09;RPB=0.86641;SGB=77.2904;VDB=0.259706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.9:14650829 chr09:014650829 0 W/14650829-14650829 FN2580-S SNP C -> A AC=1;AN=198;BQB=0.980853;DP=4737;DP4=1992,2435,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.61966e-09;MQSB=0.317767;RPB=0.72278;SGB=24.1541;VDB=0.905115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.9:14652366 chr09:014652366 0 W/14652366-14652366 FN2325 SNP G -> A AC=1;AN=192;BQB=0.945384;DP=4634;DP4=2185,2205,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215796;MQB=2.02007e-06;MQSB=0.94271;RPB=0.335748;SGB=49.2105;VDB=0.806125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R66W|149|LOC_Os09g24600|protein_coding|CODING|LOC_Os09g24600.1|1|1) FN-218.SNP.9:14674582 chr09:014674582 0 W/14674582-14674582 FN-218 Single Base Substitution G-T INTRON HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2665-S.SNP.9:14679892 chr09:014679892 0 W/14679892-14679892 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.999957;DP=4904;DP4=2375,2272,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.61989e-09;MQSB=0.817264;RPB=0.383073;SGB=58.8698;VDB=0.399491;EFF=INTRON(MODIFIER||||467|LOC_Os09g24660|protein_coding|CODING|LOC_Os09g24660.1|2|1) FN395-S.SNP.9:14680723 chr09:014680723 0 W/14680723-14680723 FN395-S Single Base Substitution C-A INTRON HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN-101.SNP.9:14683352 chr09:014683352 0 W/14683352-14683352 FN-101 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g24670 CAAX amino terminal protease family protein, putative, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-101.SNP.9:14683353 chr09:014683353 0 W/14683353-14683353 FN-101 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1508-S.SNP.9:14687465 chr09:014687465 0 W/14687465-14687465 FN1508-S Single Base Substitution T-C INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN711-S.SNP.9:14690705 chr09:014690705 0 W/14690705-14690705 FN711-S Single Base Substitution C-T INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN4075-S.SNP.9:14693893 chr09:014693893 0 W/14693893-14693893 FN4075-S SNP A -> G AC=2;AN=182;BQB=0.927243;DP=3346;DP4=1966,1290,20,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.20691e-16;MQSB=0.898091;RPB=0.488175;SGB=116.285;VDB=0.431303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.9:14694269 chr09:014694269 0 W/14694269-14694269 FN2428 SNP A -> T AC=1;AN=200;BQB=0.803499;DP=4797;DP4=2207,2267,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.00451e-13;MQSB=0.986466;RPB=0.7045;SGB=47.7211;VDB=0.12252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.9:14699594 chr09:014699594 0 W/14699594-14699594 FN3930-S SNP C -> T AC=1;AN=158;BQB=0.814567;DP=3012;DP4=1400,1450,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.97552e-10;MQSB=0.956332;RPB=0.991924;SGB=73.2838;VDB=0.936782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.9:14700733 chr09:014700733 0 W/14700733-14700733 FN2289 SNP A -> C AC=1;AN=192;BQB=0.980819;DP=5278;DP4=2158,2758,18,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.84332e-16;MQSB=0.825501;RPB=0.286497;SGB=69.9435;VDB=0.387684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.9:14701856 chr09:014701856 0 W/14701856-14701856 FN3821-S SNP A -> G AC=1;AN=190;BQB=0.557933;DP=3228;DP4=1404,1629,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.54843e-07;MQSB=0.967458;RPB=0.768284;SGB=26.2136;VDB=0.742167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.9:14702958 chr09:014702958 0 W/14702958-14702958 FN2676-S SNP T -> A AC=1;AN=200;BQB=0.995411;DP=5287;DP4=2727,2350,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.56097e-12;MQSB=0.945335;RPB=0.902814;SGB=54.6902;VDB=0.242607;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.9:14706133 chr09:014706133 0 W/14706133-14706133 FN-259 Single Base Substitution A-T INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN3843-S.SNP.9:14714449 chr09:014714449 0 W/14714449-14714449 FN3843-S SNP T -> C AC=1;AN=190;BQB=0.817094;DP=2780;DP4=1349,1291,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.60845e-06;MQSB=0.998914;RPB=0.847048;SGB=10.8904;VDB=0.456924;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L187|372|LOC_Os09g24710|protein_coding|CODING|LOC_Os09g24710.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L187|372|LOC_Os09g24710|protein_coding|CODING|LOC_Os09g24710.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L187|281|LOC_Os09g24710|protein_coding|CODING|LOC_Os09g24710.3|3|1) FN2499.SNP.9:14716682 chr09:014716682 0 W/14716682-14716682 FN2499 SNP G -> A AC=1;AN=200;BQB=0.144001;DP=4503;DP4=2090,2077,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22787e-10;MQSB=0.794979;RPB=0.253461;SGB=19.1209;VDB=0.499812;EFF=SPLICE_SITE_REGION(LOW||||372|LOC_Os09g24710|protein_coding|CODING|LOC_Os09g24710.2|5|1),UTR_3_PRIME(MODIFIER||298||372|LOC_Os09g24710|protein_coding|CODING|LOC_Os09g24710.2|5|1) FN1330-S.SNP.9:14725821 chr09:014725821 0 W/14725821-14725821 FN1330-S Single Base Substitution T-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN4154-S.SNP.9:14734271 chr09:014734271 0 W/14734271-14734271 FN4154-S SNP C -> A AC=2;AN=170;BQB=0.605954;DP=2351;DP4=1079,1188,12,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000425351;MQB=2.13451e-08;MQSB=0.996636;RPB=0.993364;SGB=92.2986;VDB=0.00970794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.9:14737212 chr09:014737212 0 W/14737212-14737212 FN1572-S Single Base Substitution T-C INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1586-S.SNP.9:14738867 chr09:014738867 0 W/14738867-14738867 FN1586-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os09g24740 retrotransposon protein, putative, unclassified, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN-144.SNP.9:14739303 chr09:014739303 0 W/14739303-14739303 FN-144 Single Base Substitution G-A INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3653-S.SNP.9:14741005 chr09:014741005 0 W/14741005-14741005 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.733214;DP=2923;DP4=1341,1495,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41049e-06;MQSB=0.314247;RPB=0.99394;SGB=25.439;VDB=0.974513;EFF=SPLICE_SITE_REGION(LOW||||1079|LOC_Os09g24740|protein_coding|CODING|LOC_Os09g24740.1|2|1),INTRON(MODIFIER||||1079|LOC_Os09g24740|protein_coding|CODING|LOC_Os09g24740.1|2|1) FN4174-S.SNP.9:14748967 chr09:014748967 0 W/14748967-14748967 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.986311;DP=2543;DP4=1152,1320,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00629178;MQB=0.0351683;MQSB=0.997035;RPB=0.224459;SGB=38.987;VDB=0.962347;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.9:14750031 chr09:014750031 0 W/14750031-14750031 FN-134 Single Base Substitution G-A INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN1036-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN1036-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1338-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN1338-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1493-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN1493-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1643-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN1643-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2283.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN2283 SNP G -> A AC=2;AN=192;BQB=0.0782989;DP=5291;DP4=2291,2616,32,49;HOB=0.0206163;ICB=0.494846;MQ=43;MQ0F=0.016254;MQB=0.00199062;MQSB=0.0356462;RPB=0.882151;SGB=223.433;VDB=0.255009;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1017|1665|LOC_Os09g24770|protein_coding|CODING|LOC_Os09g24770.1|3|1) FN2431.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN2431 SNP G -> A AC=1;AN=200;BQB=0.504523;DP=4123;DP4=1773,2078,9,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0145525;MQB=0.464424;MQSB=0.0652572;RPB=0.993229;SGB=68.0801;VDB=0.60711;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1017|1665|LOC_Os09g24770|protein_coding|CODING|LOC_Os09g24770.1|3|1) FN3449-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN3449-S SNP G -> A AC=2;AN=184;BQB=0.939125;DP=3875;DP4=1826,1917,24,29;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0562581;MQB=0.0574511;MQSB=2.44006e-15;RPB=0.133806;SGB=234.136;VDB=0.80942;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1017|1665|LOC_Os09g24770|protein_coding|CODING|LOC_Os09g24770.1|3|1) FN3864-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN3864-S SNP G -> A AC=2;AN=158;BQB=0.974404;DP=2433;DP4=1066,1234,21,21;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0378134;MQB=0.0258216;MQSB=5.82516e-06;RPB=0.874255;SGB=178.151;VDB=0.834279;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1017|1665|LOC_Os09g24770|protein_coding|CODING|LOC_Os09g24770.1|3|1) FN471-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN471-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN804-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN804-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN870-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN870-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN921-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN921-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN959-S.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 FN959-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. W591-4-1.SNP.9:14756658 chr09:014756658 0 W/14756658-14756658 W591-4-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. 822-5-6.SNP.9:14757550 chr09:014757550 0 W/14757550-14757550 822-5-6 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g24770 retrotransposon protein, putative, unclassified, expressed SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3792-S.SNP.9:14757858 chr09:014757858 0 W/14757858-14757858 FN3792-S SNP C -> T AC=2;AN=190;BQB=0.669773;DP=3511;DP4=1642,1704,16,18;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.033039;MQB=1.9781e-06;MQSB=0.245437;RPB=0.123109;SGB=110.732;VDB=0.0378337;EFF=INTRON(MODIFIER||||1665|LOC_Os09g24770|protein_coding|CODING|LOC_Os09g24770.1|1|1) FN3434-S.SNP.9:14760130 chr09:014760130 0 W/14760130-14760130 FN3434-S SNP C -> T AC=1;AN=184;BQB=0.986262;DP=3469;DP4=1767,1632,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0115307;MQB=2.78063e-06;MQSB=0.105323;RPB=0.615374;SGB=56.8786;VDB=0.450469;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.9:14761009 chr09:014761009 0 W/14761009-14761009 FN-311 Single Base Substitution C-T INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2386.SNP.9:14764626 chr09:014764626 0 W/14764626-14764626 FN2386 SNP G -> A AC=1;AN=192;BQB=0.583552;DP=5043;DP4=2350,2274,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49081e-13;MQSB=0.655167;RPB=0.774057;SGB=16.7409;VDB=0.883931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P358L|771|LOC_Os09g24790|protein_coding|CODING|LOC_Os09g24790.1|5|1) FN2146-S.SNP.9:14765291 chr09:014765291 0 W/14765291-14765291 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.355972;DP=2401;DP4=1035,1309,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000416493;MQB=1.02625e-05;MQSB=0.936091;RPB=0.987115;SGB=-16.665;VDB=0.170903;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T217|771|LOC_Os09g24790|protein_coding|CODING|LOC_Os09g24790.1|2|1) FN2620-S.SNP.9:14768267 chr09:014768267 0 W/14768267-14768267 FN2620-S SNP C -> A AC=1;AN=198;BQB=0.297389;DP=3435;DP4=1832,1378,15,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.09416e-11;MQSB=0.858929;RPB=0.929141;SGB=37.1297;VDB=0.0996762;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.9:14780712 chr09:014780712 0 W/14780712-14780712 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.994799;DP=2000;DP4=989,900,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.82379e-05;MQSB=0.977437;RPB=0.670532;SGB=34.5445;VDB=0.859907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.9:14784205 chr09:014784205 0 W/14784205-14784205 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.798859;DP=2080;DP4=1084,915,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.51153e-07;MQSB=0.892931;RPB=0.93884;SGB=27.3346;VDB=0.879703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.9:14784207 chr09:014784207 0 W/14784207-14784207 FN3901-S SNP T -> G AC=1;AN=158;BQB=0.774338;DP=2067;DP4=1098,890,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.91355e-07;MQSB=0.944924;RPB=0.984131;SGB=38.3284;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.9:14786782 chr09:014786782 0 W/14786782-14786782 FN2281 SNP A -> G AC=1;AN=192;BQB=0.724588;DP=5123;DP4=2411,2437,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000390396;MQB=1.13541e-15;MQSB=0.809948;RPB=0.903236;SGB=122.24;VDB=0.435483;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.9:14788408 chr09:014788408 0 W/14788408-14788408 FN-113 Single Base Substitution A-T INTERGENIC HOMO SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN487-S.SNP.9:14805442 chr09:014805442 0 W/14805442-14805442 FN487-S Single Base Substitution A-G INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN_812-4-1.SNP.9:14815473 chr09:014815473 0 W/14815473-14815473 FN_812-4-1 Single Base Substitution C-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN-153.SNP.9:14817035 chr09:014817035 0 W/14817035-14817035 FN-153 Single Base Substitution T-G INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN_829-2-5.SNP.9:14818342 chr09:014818342 0 W/14818342-14818342 FN_829-2-5 Single Base Substitution C-T Homo SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN1475-S.SNP.9:14818343 chr09:014818343 0 W/14818343-14818343 FN1475-S Single Base Substitution C-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2428.SNP.9:14820017 chr09:014820017 0 W/14820017-14820017 FN2428 SNP A -> T AC=1;AN=200;BQB=0.825312;DP=5009;DP4=2616,2147,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.35431e-08;MQSB=0.933766;RPB=0.999712;SGB=33.0593;VDB=0.551461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.9:14822014 chr09:014822014 0 W/14822014-14822014 FN-325 Single Base Substitution A-G INTERGENIC HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN896-S.SNP.9:14828064 chr09:014828064 0 W/14828064-14828064 FN896-S Single Base Substitution A-T INTERGENIC HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN1151-S.SNP.9:14837699 chr09:014837699 0 W/14837699-14837699 FN1151-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g24850 retrotransposon protein, putative, unclassified, expressed SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN4133-S.SNP.9:14840395 chr09:014840395 0 W/14840395-14840395 FN4133-S SNP T -> C AC=1;AN=182;BQB=0.240251;DP=2235;DP4=868,1006,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000194304;MQSB=0.999524;RPB=0.31951;SGB=-54.8773;VDB=0.779078;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.9:14849258 chr09:014849258 0 W/14849258-14849258 FN2768-S SNP C -> T AC=2;AN=198;BQB=0.111188;DP=3893;DP4=1880,1809,26,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.49656e-26;MQSB=0.479773;RPB=0.796974;SGB=191.998;VDB=0.138682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.9:14849259 chr09:014849259 0 W/14849259-14849259 FN2768-S SNP G -> T AC=2;AN=198;BQB=0.768769;DP=3904;DP4=1899,1815,27,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.24838e-25;MQSB=0.474161;RPB=0.858264;SGB=52.4176;VDB=0.25923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.9:14852181 chr09:014852181 0 W/14852181-14852181 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.569929;DP=3014;DP4=1394,1515,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.48675e-07;MQSB=0.989014;RPB=0.972459;SGB=57.786;VDB=0.941713;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.9:14859792 chr09:014859792 0 W/14859792-14859792 FN-325 Single Base Substitution G-T INTERGENIC HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN-325.SNP.9:14859793 chr09:014859793 0 W/14859793-14859793 FN-325 Single Base Substitution G-T INTERGENIC HOMO SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN-98.SNP.9:14873798 chr09:014873798 0 W/14873798-14873798 FN-98 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN3858-S.SNP.9:14874622 chr09:014874622 0 W/14874622-14874622 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.953211;DP=2398;DP4=982,1320,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.97486e-07;MQSB=0.920983;RPB=0.893416;SGB=34.0735;VDB=0.933165;EFF=INTRON(MODIFIER||||554|LOC_Os09g24910|protein_coding|CODING|LOC_Os09g24910.1|4|1),INTRON(MODIFIER||||527|LOC_Os09g24910|protein_coding|CODING|LOC_Os09g24910.2|4|1) FN3807-S.SNP.9:14874998 chr09:014874998 0 W/14874998-14874998 FN3807-S SNP A -> T AC=1;AN=190;BQB=0.157087;DP=2575;DP4=1297,1183,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19984e-06;MQSB=0.935552;RPB=0.0569372;SGB=23.6597;VDB=0.379;EFF=INTRON(MODIFIER||||554|LOC_Os09g24910|protein_coding|CODING|LOC_Os09g24910.1|3|1),INTRON(MODIFIER||||527|LOC_Os09g24910|protein_coding|CODING|LOC_Os09g24910.2|3|1) FN922-S.SNP.9:14879764 chr09:014879764 0 W/14879764-14879764 FN922-S Single Base Substitution T-A INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1028-S.SNP.9:14884832 chr09:014884832 0 W/14884832-14884832 FN1028-S Single Base Substitution T-A INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-291.SNP.9:14887831 chr09:014887831 0 W/14887831-14887831 FN-291 Single Base Substitution G-T INTRON HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN4271-S.SNP.9:14889770 chr09:014889770 0 W/14889770-14889770 FN4271-S SNP G -> T AC=1;AN=170;BQB=0.738943;DP=2156;DP4=998,1082,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.18101e-08;MQSB=0.990551;RPB=0.729122;SGB=31.4354;VDB=0.730534;EFF=INTRON(MODIFIER||||511|LOC_Os09g24924|protein_coding|CODING|LOC_Os09g24924.1|1|1) FN3819-S.SNP.9:14890488 chr09:014890488 0 W/14890488-14890488 FN3819-S SNP G -> A AC=1;AN=190;BQB=0.978846;DP=2248;DP4=1230,889,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26869e-07;MQSB=0.819152;RPB=0.889296;SGB=46.7622;VDB=0.722032;EFF=INTRON(MODIFIER||||511|LOC_Os09g24924|protein_coding|CODING|LOC_Os09g24924.1|1|1) FN_798-4-2.SNP.9:14893285 chr09:014893285 0 W/14893285-14893285 FN_798-4-2 Single Base Substitution G-A HET SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN3532-S.SNP.9:14898345 chr09:014898345 0 W/14898345-14898345 FN3532-S SNP C -> T AC=2;AN=188;BQB=0.86559;DP=2896;DP4=1451,1333,29,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.20804e-24;MQSB=0.792991;RPB=0.414841;SGB=166.4;VDB=0.876065;EFF=INTRON(MODIFIER||||188|LOC_Os09g24954|protein_coding|CODING|LOC_Os09g24954.1|2|1),INTRON(MODIFIER||||180|LOC_Os09g24954|protein_coding|CODING|LOC_Os09g24954.2|3|1),INTRON(MODIFIER||||162|LOC_Os09g24954|protein_coding|CODING|LOC_Os09g24954.3|3|1) FN-187.SNP.9:14904263 chr09:014904263 0 W/14904263-14904263 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3982-S.SNP.9:14910991 chr09:014910991 0 W/14910991-14910991 FN3982-S SNP A -> C AC=1;AN=168;BQB=0.678158;DP=2663;DP4=1292,1174,4,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.06369e-09;MQSB=0.914033;RPB=0.893878;SGB=14.2064;VDB=0.0719538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.9:14914813 chr09:014914813 0 W/14914813-14914813 FN2487 SNP G -> C AC=1;AN=200;BQB=0.115738;DP=4872;DP4=2128,2444,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21013e-13;MQSB=0.807035;RPB=0.879606;SGB=17.5158;VDB=0.253181;EFF=UTR_5_PRIME(MODIFIER||983||105|LOC_Os09g24965|protein_coding|CODING|LOC_Os09g24965.1|1|1) FN-201.SNP.9:14915859 chr09:014915859 0 W/14915859-14915859 FN-201 Single Base Substitution C-T UTR_5_PRIME HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN806-S.SNP.9:14919048 chr09:014919048 0 W/14919048-14919048 FN806-S Single Base Substitution A-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN806-S.SNP.9:14919051 chr09:014919051 0 W/14919051-14919051 FN806-S Single Base Substitution T-G INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN806-S.SNP.9:14919053 chr09:014919053 0 W/14919053-14919053 FN806-S Single Base Substitution C-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3293-S.SNP.9:14919076 chr09:014919076 0 W/14919076-14919076 FN3293-S SNP C -> T AC=1;AN=184;BQB=0.957571;DP=2635;DP4=1238,1294,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.32284e-07;MQSB=0.996738;RPB=0.473508;SGB=48.7425;VDB=0.910209;EFF=INTERGENIC(MODIFIER||||||||||1) 705-1.SNP.9:14925676 chr09:014925676 0 W/14925676-14925676 705-1 Single Base Substitution C-T INTRON HET SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-2.SNP.9:14925676 chr09:014925676 0 W/14925676-14925676 705-2 Single Base Substitution C-T INTRON Homo SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. 705-7.SNP.9:14925676 chr09:014925676 0 W/14925676-14925676 705-7 Single Base Substitution C-T INTRON Homo SNo: 1465, Mutant_ID: 705-7, Generation: M2, Mutations: 43, Genes: 45, Seed availability: No. FN956-S.SNP.9:14929822 chr09:014929822 0 W/14929822-14929822 FN956-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g24990 CAF1 family ribonuclease containing protein, putative, expressed SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN4111-S.SNP.9:14941671 chr09:014941671 0 W/14941671-14941671 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.912324;DP=2868;DP4=1401,1358,7,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.1158e-11;MQSB=0.945948;RPB=0.530164;SGB=93.7308;VDB=0.229233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.9:14945715 chr09:014945715 0 W/14945715-14945715 FN1363-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2795-S.SNP.9:14946054 chr09:014946054 0 W/14946054-14946054 FN2795-S SNP C -> A AC=1;AN=198;BQB=0.809253;DP=3647;DP4=1746,1741,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.31922e-08;MQSB=0.573443;RPB=0.979004;SGB=67.9293;VDB=0.780716;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C70*|351|LOC_Os09g25010|protein_coding|CODING|LOC_Os09g25010.1|1|1);LOF=(LOC_Os09g25010|LOC_Os09g25010|1|1.00);NMD=(LOC_Os09g25010|LOC_Os09g25010|1|1.00) FN2781-S.SNP.9:14956831 chr09:014956831 0 W/14956831-14956831 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.983896;DP=4308;DP4=1809,2085,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05544e-07;MQSB=0.908553;RPB=0.0891023;SGB=-14.4309;VDB=0.463906;EFF=INTERGENIC(MODIFIER||||||||||1) FN-291.SNP.9:14963673 chr09:014963673 0 W/14963673-14963673 FN-291 Single Base Substitution G-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2649-S.SNP.9:14964326 chr09:014964326 0 W/14964326-14964326 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.916579;DP=4814;DP4=2511,1971,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58575e-12;MQSB=0.805146;RPB=0.287717;SGB=79.9264;VDB=0.901292;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.9:14966645 chr09:014966645 0 W/14966645-14966645 W500-4-7-1 Single Base Substitution G-T INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2302.SNP.9:14971047 chr09:014971047 0 W/14971047-14971047 FN2302 SNP A -> G AC=1;AN=192;BQB=0.574849;DP=5107;DP4=2204,2566,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00019581;MQB=2.97556e-13;MQSB=0.230912;RPB=0.316752;SGB=122.24;VDB=0.42121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.9:14972971 chr09:014972971 0 W/14972971-14972971 FN3890-S SNP G -> A AC=1;AN=158;BQB=0.565581;DP=2463;DP4=1225,1144,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=5.81102e-06;MQSB=0.16501;RPB=0.728127;SGB=50.9207;VDB=0.557628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S529N|618|LOC_Os09g25050|protein_coding|CODING|LOC_Os09g25050.1|1|1) FN2442.SNP.9:14974403 chr09:014974403 0 W/14974403-14974403 FN2442 SNP T -> C AC=1;AN=200;BQB=0.960568;DP=4666;DP4=2345,2036,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97946e-14;MQSB=0.514044;RPB=0.994294;SGB=79.9264;VDB=0.722233;EFF=INTRON(MODIFIER||||618|LOC_Os09g25050|protein_coding|CODING|LOC_Os09g25050.1|2|1) FN476-S.SNP.9:14974403 chr09:014974403 0 W/14974403-14974403 FN476-S Single Base Substitution T-C INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN935-S.SNP.9:14974403 chr09:014974403 0 W/14974403-14974403 FN935-S Single Base Substitution T-C INTRON HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2667-S.SNP.9:14978876 chr09:014978876 0 W/14978876-14978876 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.39838;DP=4897;DP4=2558,2110,9,3;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=2.15252e-05;MQSB=1.71152e-05;RPB=0.999888;SGB=33.0593;VDB=0.840969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.9:14982656 chr09:014982656 0 W/14982656-14982656 FN2230-S SNP A -> C AC=1;AN=190;BQB=0.583705;DP=5066;DP4=2042,2659,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000197394;MQB=4.22369e-11;MQSB=0.017432;RPB=0.858628;SGB=99.1879;VDB=0.584417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.9:14986632 chr09:014986632 0 W/14986632-14986632 FN2723-S SNP A -> T AC=1;AN=200;BQB=0.855924;DP=4911;DP4=2560,2180,6,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.02174e-07;MQSB=0.973349;RPB=0.870102;SGB=68.0801;VDB=0.0896172;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.9:14987220 chr09:014987220 0 W/14987220-14987220 FN355-S Single Base Substitution A-G INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2480.SNP.9:14988639 chr09:014988639 0 W/14988639-14988639 FN2480 SNP G -> A AC=2;AN=200;BQB=0.534569;DP=4847;DP4=2131,2482,27,18;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.000206313;MQB=1.68973e-18;MQSB=0.87922;RPB=0.644851;SGB=102.43;VDB=0.497026;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.9:14988892 chr09:014988892 0 W/14988892-14988892 FN-194 Single Base Substitution A-C INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1028-S.SNP.9:14988998 chr09:014988998 0 W/14988998-14988998 FN1028-S Single Base Substitution C-A INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN742-S.SNP.9:14992237 chr09:014992237 0 W/14992237-14992237 FN742-S Single Base Substitution A-G INTERGENIC HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN3421-S.SNP.9:14993972 chr09:014993972 0 W/14993972-14993972 FN3421-S SNP T -> C AC=2;AN=184;BQB=0.998616;DP=3868;DP4=2418,1254,21,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.85381e-17;MQSB=0.975454;RPB=0.908216;SGB=102.662;VDB=0.400919;EFF=INTRON(MODIFIER||||318|LOC_Os09g25070|protein_coding|CODING|LOC_Os09g25070.1|3|1),INTRON(MODIFIER||||279|LOC_Os09g25070|protein_coding|CODING|LOC_Os09g25070.2|2|1) FN2537-S.SNP.9:15002414 chr09:015002414 0 W/15002414-15002414 FN2537-S SNP G -> T AC=2;AN=198;BQB=0.585149;DP=3722;DP4=1667,1707,20,14;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=4.54908e-17;MQSB=0.549779;RPB=0.409295;SGB=34.8713;VDB=0.38614;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.9:15007579 chr09:015007579 0 W/15007579-15007579 FN4311-S SNP G -> A AC=2;AN=170;BQB=0.697507;DP=2431;DP4=1090,1243,10,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.88706e-10;MQSB=0.930871;RPB=0.824762;SGB=92.2986;VDB=0.984358;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.9:15008630 chr09:015008630 0 W/15008630-15008630 FN507-S Single Base Substitution A-T INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN3828-S.SNP.9:15012138 chr09:015012138 0 W/15012138-15012138 FN3828-S SNP G -> T AC=1;AN=190;BQB=0.995704;DP=2764;DP4=1348,1317,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.65728e-08;MQSB=8.79999e-06;RPB=0.891392;SGB=64.5316;VDB=0.358978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:15014368 chr09:015014368 0 W/15014368-15014368 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1697-S.SNP.9:15022546 chr09:015022546 0 W/15022546-15022546 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.0264399;DP=3610;DP4=1323,2247,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.0252837;MQSB=0.139032;RPB=0.226354;SGB=-36.9078;VDB=0.181015;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.9:15024653 chr09:015024653 0 W/15024653-15024653 FN723-S Single Base Substitution C-T INTERGENIC HET SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN677-S.SNP.9:15076580 chr09:015076580 0 W/15076580-15076580 FN677-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3418-S.SNP.9:15091573 chr09:015091573 0 W/15091573-15091573 FN3418-S SNP T -> C AC=1;AN=184;BQB=0.9178;DP=2844;DP4=1483,1279,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.77095e-09;MQSB=0.984962;RPB=0.749249;SGB=2.23696;VDB=0.673888;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A60|398|LOC_Os09g25190|protein_coding|CODING|LOC_Os09g25190.1|2|1) FN4155-S.SNP.9:15091709 chr09:015091709 0 W/15091709-15091709 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.943753;DP=2736;DP4=1315,1363,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.10493e-07;MQSB=0.871097;RPB=0.998637;SGB=56.7575;VDB=0.977247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D106N|398|LOC_Os09g25190|protein_coding|CODING|LOC_Os09g25190.1|2|1) FN2708-S.SNP.9:15101564 chr09:015101564 0 W/15101564-15101564 FN2708-S SNP G -> C AC=1;AN=200;BQB=0.209807;DP=3156;DP4=1781,1184,12,2;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0148923;MQB=0.20273;MQSB=0.0122341;RPB=0.309903;SGB=21.6694;VDB=0.177391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.9:15124765 chr09:015124765 0 W/15124765-15124765 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.334022;DP=3776;DP4=1667,1802,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.18207e-05;MQSB=0.109466;RPB=0.955565;SGB=65.3149;VDB=0.141438;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:15139902 chr09:015139902 0 W/15139902-15139902 FN1097-S Single Base Substitution G-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2685-S.SNP.9:15163890 chr09:015163890 0 W/15163890-15163890 FN2685-S SNP G -> A AC=2;AN=200;BQB=0.335155;DP=4826;DP4=2346,2209,25,21;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=7.65016e-18;MQSB=0.420634;RPB=0.824127;SGB=206.235;VDB=0.35071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R472W|618|LOC_Os09g25330|protein_coding|CODING|LOC_Os09g25330.1|4|1) FN443-S.SNP.9:15169825 chr09:015169825 0 W/15169825-15169825 FN443-S Single Base Substitution G-T INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2550-S.SNP.9:15171488 chr09:015171488 0 W/15171488-15171488 FN2550-S SNP T -> A AC=1;AN=198;BQB=0.132011;DP=4158;DP4=1943,1803,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17931e-05;MQSB=0.859294;RPB=0.704069;SGB=-16.8114;VDB=0.42044;EFF=INTERGENIC(MODIFIER||||||||||1) FN1351-S.SNP.9:15184435 chr09:015184435 0 W/15184435-15184435 FN1351-S Single Base Substitution C-T INTERGENIC HET SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN3596-S.SNP.9:15185098 chr09:015185098 0 W/15185098-15185098 FN3596-S SNP A -> G AC=1;AN=188;BQB=0.994018;DP=2516;DP4=990,1423,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.9389e-08;MQSB=0.99768;RPB=0.469073;SGB=23.5329;VDB=0.0475066;EFF=INTERGENIC(MODIFIER||||||||||1) FN1699-S.SNP.9:15185791 chr09:015185791 0 W/15185791-15185791 FN1699-S SNP A -> G AC=1;AN=188;BQB=3.13395e-06;DP=3889;DP4=1878,1947,19,13;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.00179995;MQB=0.0297925;MQSB=3.64659e-08;RPB=0.0699598;SGB=-444.763;VDB=0.0417576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.9:15192263 chr09:015192263 0 W/15192263-15192263 FN2492 SNP G -> A AC=1;AN=200;BQB=0.99144;DP=4141;DP4=1910,1964,2,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0019319;MQB=0.00171567;MQSB=6.48865e-06;RPB=0.991088;SGB=35.8441;VDB=0.774083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S313N|574|LOC_Os09g25360|protein_coding|CODING|LOC_Os09g25360.1|1|1) FN4135-S.SNP.9:15216914 chr09:015216914 0 W/15216914-15216914 FN4135-S SNP G -> T AC=1;AN=182;BQB=0.996151;DP=2728;DP4=1390,1268,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.62271e-08;MQSB=0.928429;RPB=0.549219;SGB=48.6223;VDB=0.910753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.9:15222221 chr09:015222221 0 W/15222221-15222221 FN1499-S Single Base Substitution A-G INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4184-S.SNP.9:15230685 chr09:015230685 0 W/15230685-15230685 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.882567;DP=2154;DP4=847,1245,2,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.63795e-07;MQSB=0.0988583;RPB=0.913734;SGB=34.878;VDB=0.744987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.9:15237250 chr09:015237250 0 W/15237250-15237250 FN1745-S SNP C -> T AC=2;AN=188;BQB=0.0257289;DP=3455;DP4=1916,1474,14,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.86497e-11;MQSB=0.820319;RPB=0.851994;SGB=-128.204;VDB=0.982881;EFF=INTRON(MODIFIER||||411|LOC_Os09g25420|protein_coding|CODING|LOC_Os09g25420.1|1|1) FN2690-S.SNP.9:15238044 chr09:015238044 0 W/15238044-15238044 FN2690-S SNP T -> A AC=1;AN=200;BQB=0.31802;DP=5043;DP4=2467,2257,11,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.71619e-05;MQSB=0.253166;RPB=0.54312;SGB=65.5058;VDB=0.730119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1247-S.SNP.9:15242590 chr09:015242590 0 W/15242590-15242590 FN1247-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. W466-5-1.SNP.9:15244669 chr09:015244669 0 W/15244669-15244669 W466-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-212.SNP.9:15249624 chr09:015249624 0 W/15249624-15249624 FN-212 Single Base Substitution C-T INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN2158-S.SNP.9:15250432 chr09:015250432 0 W/15250432-15250432 FN2158-S SNP G -> A AC=1;AN=168;BQB=0.0845645;DP=2501;DP4=1772,679,17,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.49735e-07;MQSB=0.991806;RPB=0.185627;SGB=-13.6493;VDB=0.852415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.9:15257859 chr09:015257859 0 W/15257859-15257859 FN2462 SNP C -> G AC=1;AN=200;BQB=0.156822;DP=4860;DP4=2360,2178,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.36558e-14;MQSB=0.727335;RPB=0.138334;SGB=-9.47921;VDB=0.251096;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.9:15265222 chr09:015265222 0 W/15265222-15265222 FN4068-S SNP C -> T AC=1;AN=182;BQB=0.924249;DP=2971;DP4=1428,1437,3,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.53726e-08;MQSB=0.869552;RPB=0.953005;SGB=66.6657;VDB=0.95658;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.9:15266363 chr09:015266363 0 W/15266363-15266363 FN3770-S SNP T -> A AC=1;AN=190;BQB=0.352215;DP=3161;DP4=1741,1199,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01759e-07;MQSB=0.981737;RPB=0.930631;SGB=5.66499;VDB=0.134516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.9:15272247 chr09:015272247 0 W/15272247-15272247 FN2220-S SNP C -> T AC=2;AN=190;BQB=0.498596;DP=4777;DP4=2284,2126,46,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13952e-36;MQSB=0.582979;RPB=0.224099;SGB=235.696;VDB=0.61478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.9:15273474 chr09:015273474 0 W/15273474-15273474 FN2794-S SNP A -> T AC=2;AN=198;BQB=0.922572;DP=4071;DP4=1945,1880,26,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.19885e-25;MQSB=0.898193;RPB=0.442099;SGB=3.4227;VDB=0.132185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.9:15275474 chr09:015275474 0 W/15275474-15275474 FN2308 SNP T -> C AC=1;AN=192;BQB=0.808049;DP=5109;DP4=2289,2554,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.8023e-09;MQSB=0.797492;RPB=0.894185;SGB=26.3496;VDB=0.237081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.9:15279837 chr09:015279837 0 W/15279837-15279837 FN1384-S Single Base Substitution G-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2242-S.SNP.9:15294118 chr09:015294118 0 W/15294118-15294118 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.18683;DP=4900;DP4=1859,2581,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204082;MQB=5.00202e-13;MQSB=0.405739;RPB=0.951934;SGB=22.7576;VDB=0.886272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3779-S.SNP.9:15305762 chr09:015305762 0 W/15305762-15305762 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.993151;DP=2629;DP4=1351,1083,18,9;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00190186;MQB=1.80404e-07;MQSB=0.582257;RPB=0.994923;SGB=54.3062;VDB=0.362129;EFF=INTRON(MODIFIER||||879|LOC_Os09g25520|protein_coding|CODING|LOC_Os09g25520.1|11|1) FN1641-S.SNP.9:15305989 chr09:015305989 0 W/15305989-15305989 FN1641-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN1392-S.SNP.9:15312757 chr09:015312757 0 W/15312757-15312757 FN1392-S Single Base Substitution G-A INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2630-S.SNP.9:15329565 chr09:015329565 0 W/15329565-15329565 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.982365;DP=4535;DP4=2267,2032,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4734e-11;MQSB=0.584451;RPB=0.778801;SGB=86.5007;VDB=0.969892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R156H|962|LOC_Os09g25550|protein_coding|CODING|LOC_Os09g25550.1|2|1) FN420-S.SNP.9:15330493 chr09:015330493 0 W/15330493-15330493 FN420-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g25550 pentatricopeptide, putative, expressed SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2180-S.SNP.9:15331091 chr09:015331091 0 W/15331091-15331091 FN2180-S SNP G -> C AC=1;AN=190;BQB=0.825093;DP=4945;DP4=2207,2476,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202224;MQB=3.57622e-07;MQSB=0.9998;RPB=0.862798;SGB=36.1006;VDB=0.11374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A665P|962|LOC_Os09g25550|protein_coding|CODING|LOC_Os09g25550.1|2|1) FN-252.SNP.9:15335012 chr09:015335012 0 W/15335012-15335012 FN-252 Single Base Substitution A-G INTRON HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN418-S.SNP.9:15352149 chr09:015352149 0 W/15352149-15352149 FN418-S Single Base Substitution T-A INTRON HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1236-S.SNP.9:15370035 chr09:015370035 0 W/15370035-15370035 FN1236-S Single Base Substitution A-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2286.SNP.9:15374347 chr09:015374347 0 W/15374347-15374347 FN2286 SNP C -> T AC=2;AN=192;BQB=0.913483;DP=3005;DP4=1232,1274,18,5;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.000332779;MQB=4.06908e-07;MQSB=0.0646271;RPB=0.979529;SGB=71.8591;VDB=0.722563;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.9:15375949 chr09:015375949 0 W/15375949-15375949 FN347-S Single Base Substitution C-T INTERGENIC HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3743-S.SNP.9:15376580 chr09:015376580 0 W/15376580-15376580 FN3743-S SNP T -> C AC=2;AN=190;BQB=0.503771;DP=2988;DP4=1571,1314,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.05697e-15;MQSB=0.943682;RPB=0.821103;SGB=100.07;VDB=0.720591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.9:15378875 chr09:015378875 0 W/15378875-15378875 FN2560-S SNP T -> A AC=2;AN=198;BQB=0.96474;DP=4247;DP4=2074,1930,11,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.48934e-14;MQSB=0.998722;RPB=0.998718;SGB=83.2905;VDB=0.893945;EFF=INTERGENIC(MODIFIER||||||||||1) FN1590-S.SNP.9:15379577 chr09:015379577 0 W/15379577-15379577 FN1590-S Single Base Substitution C-T INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN1423-S.SNP.9:15381501 chr09:015381501 0 W/15381501-15381501 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2730-S.SNP.9:15382791 chr09:015382791 0 W/15382791-15382791 FN2730-S SNP A -> T AC=1;AN=200;BQB=0.996933;DP=4725;DP4=2180,2236,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.10077e-09;MQSB=0.721381;RPB=0.575446;SGB=40.2696;VDB=0.453798;EFF=INTRON(MODIFIER||||272|LOC_Os09g25610|protein_coding|CODING|LOC_Os09g25610.1|2|1) FN2428.SNP.9:15392276 chr09:015392276 0 W/15392276-15392276 FN2428 SNP C -> T AC=1;AN=200;BQB=0.983138;DP=4115;DP4=1372,2427,5,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00704739;MQB=0.019649;MQSB=0.109389;RPB=0.160968;SGB=40.4492;VDB=0.286863;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.9:15393765 chr09:015393765 0 W/15393765-15393765 FN4190-S SNP C -> T AC=2;AN=170;BQB=0.788842;DP=2010;DP4=876,1062,8,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.54517e-08;MQSB=0.900941;RPB=0.585819;SGB=22.3266;VDB=0.96705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.9:15394814 chr09:015394814 0 W/15394814-15394814 FN2703-S SNP C -> T AC=1;AN=200;BQB=0.843887;DP=5017;DP4=2395,2396,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55883e-09;MQSB=0.98761;RPB=0.864008;SGB=68.0801;VDB=0.239887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.9:15411070 chr09:015411070 0 W/15411070-15411070 FN1552-S SNP T -> A AC=1;AN=188;BQB=0.571222;DP=3723;DP4=1729,1878,6,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.4919e-08;MQSB=0.940328;RPB=0.830576;SGB=-135.175;VDB=0.0932191;EFF=INTRON(MODIFIER||||1096|LOC_Os09g25650|protein_coding|CODING|LOC_Os09g25650.1|7|1) FN416-S.SNP.9:15411625 chr09:015411625 0 W/15411625-15411625 FN416-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2230-S.SNP.9:15412551 chr09:015412551 0 W/15412551-15412551 FN2230-S SNP C -> A AC=2;AN=190;BQB=0.898756;DP=4877;DP4=2288,2300,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.27934e-12;MQSB=0.838508;RPB=0.904901;SGB=85.5263;VDB=0.269964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E428D|1096|LOC_Os09g25650|protein_coding|CODING|LOC_Os09g25650.1|4|1),SPLICE_SITE_REGION(LOW||||1096|LOC_Os09g25650|protein_coding|CODING|LOC_Os09g25650.1|4|1) FN3571-S.SNP.9:15412838 chr09:015412838 0 W/15412838-15412838 FN3571-S SNP T -> A AC=1;AN=188;BQB=0.519907;DP=2580;DP4=1224,1306,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.8109e-05;MQSB=0.898144;RPB=0.999044;SGB=21.8113;VDB=0.863147;EFF=INTRON(MODIFIER||||1096|LOC_Os09g25650|protein_coding|CODING|LOC_Os09g25650.1|3|1) FN4116-S.SNP.9:15427872 chr09:015427872 0 W/15427872-15427872 FN4116-S SNP G -> A AC=2;AN=182;BQB=0.988956;DP=3150;DP4=1213,1828,12,28;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.83942e-21;MQSB=0.980682;RPB=0.510139;SGB=174.926;VDB=0.0184669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.9:15431312 chr09:015431312 0 W/15431312-15431312 FN1039-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2274-S.SNP.9:15433984 chr09:015433984 0 W/15433984-15433984 FN2274-S SNP A -> G AC=1;AN=190;BQB=0.638107;DP=4981;DP4=2323,2407,24,5;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.100381;MQB=0.291633;MQSB=0;RPB=0.79416;SGB=126.511;VDB=0.436941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.9:15441555 chr09:015441555 0 W/15441555-15441555 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.619452;DP=4229;DP4=1999,2045,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.27075e-14;MQSB=0.999665;RPB=0.99991;SGB=-38.26;VDB=0.360777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.9:15442597 chr09:015442597 0 W/15442597-15442597 FN2349 SNP G -> A AC=2;AN=192;BQB=0.888904;DP=5041;DP4=2598,2096,24,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.09636e-22;MQSB=0.0920004;RPB=0.679015;SGB=143.146;VDB=0.137173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.9:15448836 chr09:015448836 0 W/15448836-15448836 FN3411-S SNP A -> C AC=1;AN=184;BQB=0.997101;DP=2872;DP4=1410,1383,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.56988e-08;MQSB=0.987211;RPB=0.61212;SGB=39.2697;VDB=0.411966;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L211|385|LOC_Os09g25770|protein_coding|CODING|LOC_Os09g25770.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L211|368|LOC_Os09g25770|protein_coding|CODING|LOC_Os09g25770.2|4|1) FN1322-S.SNP.9:15452477 chr09:015452477 0 W/15452477-15452477 FN1322-S Single Base Substitution A-T INTRON HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN2742-S.SNP.9:15453427 chr09:015453427 0 W/15453427-15453427 FN2742-S SNP A -> G AC=1;AN=200;BQB=0.877274;DP=5001;DP4=2130,2372,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15312e-09;MQSB=0.2358;RPB=0.638077;SGB=72.7161;VDB=0.980533;EFF=INTRON(MODIFIER||||267|LOC_Os09g25784|protein_coding|CODING|LOC_Os09g25784.1|2|1),INTRON(MODIFIER||||185|LOC_Os09g25784|protein_coding|CODING|LOC_Os09g25784.2|3|1) FN-386.SNP.9:15456599 chr09:015456599 0 W/15456599-15456599 FN-386 Single Base Substitution T-A INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3424-S.SNP.9:15468933 chr09:015468933 0 W/15468933-15468933 FN3424-S SNP A -> G AC=1;AN=184;BQB=0.576825;DP=3299;DP4=1128,2056,4,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01401e-08;MQSB=0.741646;RPB=0.732379;SGB=33.3622;VDB=0.555249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.9:15475275 chr09:015475275 0 W/15475275-15475275 FN3506-S SNP G -> A AC=1;AN=188;BQB=0.864386;DP=2809;DP4=1414,1312,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.85411e-07;MQSB=0.72909;RPB=0.581381;SGB=58.0655;VDB=0.37956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.9:15477455 chr09:015477455 0 W/15477455-15477455 FN2488 SNP T -> A AC=1;AN=200;BQB=0.581604;DP=4821;DP4=2467,2052,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01786e-09;MQSB=0.968638;RPB=0.990466;SGB=72.6852;VDB=0.035405;EFF=INTERGENIC(MODIFIER||||||||||1) FN-381.SNP.9:15478088 chr09:015478088 0 W/15478088-15478088 FN-381 Single Base Substitution T-C INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3768-S.SNP.9:15484805 chr09:015484805 0 W/15484805-15484805 FN3768-S SNP G -> T AC=1;AN=190;BQB=0.693081;DP=2530;DP4=1155,1293,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01072e-07;MQSB=0.997119;RPB=0.609553;SGB=18.552;VDB=0.633147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.9:15486430 chr09:015486430 0 W/15486430-15486430 FN1615-S Single Base Substitution A-G INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN501-S.SNP.9:15488033 chr09:015488033 0 W/15488033-15488033 FN501-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1032-S.SNP.9:15488257 chr09:015488257 0 W/15488257-15488257 FN1032-S Single Base Substitution G-A INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1032-S.SNP.9:15488258 chr09:015488258 0 W/15488258-15488258 FN1032-S Single Base Substitution C-A INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4050-S.SNP.9:15491763 chr09:015491763 0 W/15491763-15491763 FN4050-S SNP T -> C AC=1;AN=168;BQB=0.942676;DP=3118;DP4=1612,1394,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50585e-09;MQSB=0.985391;RPB=0.0919549;SGB=78.7577;VDB=0.941796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.9:15492382 chr09:015492382 0 W/15492382-15492382 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.901712;DP=3261;DP4=1748,1362,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58912e-08;MQSB=0.99344;RPB=0.275754;SGB=26.2136;VDB=0.671454;EFF=INTERGENIC(MODIFIER||||||||||1) FN408-S.SNP.9:15492763 chr09:015492763 0 W/15492763-15492763 FN408-S Single Base Substitution T-C INTERGENIC HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2268-S.SNP.9:15493254 chr09:015493254 0 W/15493254-15493254 FN2268-S SNP G -> C AC=1;AN=190;BQB=0.682445;DP=3921;DP4=1890,1849,5,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.0305e-12;MQSB=0.840837;RPB=0.441499;SGB=78.7471;VDB=0.19777;EFF=INTRON(MODIFIER||||619|LOC_Os09g25850|protein_coding|CODING|LOC_Os09g25850.1|1|1) FN-156.SNP.9:15498366 chr09:015498366 0 W/15498366-15498366 FN-156 Single Base Substitution C-T INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN620-S.SNP.9:15503344 chr09:015503344 0 W/15503344-15503344 FN620-S Single Base Substitution T-A INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN620-S.SNP.9:15509014 chr09:015509014 0 W/15509014-15509014 FN620-S Single Base Substitution C-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN978-S.SNP.9:15510050 chr09:015510050 0 W/15510050-15510050 FN978-S Single Base Substitution A-G INTERGENIC HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-162.SNP.9:15513151 chr09:015513151 0 W/15513151-15513151 FN-162 Single Base Substitution T-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1566-S.SNP.9:15514178 chr09:015514178 0 W/15514178-15514178 FN1566-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g25870 transposon protein, putative, unclassified, expressed SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3845-S.SNP.9:15516507 chr09:015516507 0 W/15516507-15516507 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.798375;DP=3354;DP4=1678,1546,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.131485;MQB=0.00649003;MQSB=1.32948e-09;RPB=0.476979;SGB=112.85;VDB=0.526661;EFF=INTRON(MODIFIER||||1366|LOC_Os09g25870|protein_coding|CODING|LOC_Os09g25870.1|1|1) FN4201-S.SNP.9:15518975 chr09:015518975 0 W/15518975-15518975 FN4201-S SNP G -> A AC=1;AN=170;BQB=0.986639;DP=3075;DP4=1660,1338,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0874797;MQB=0.900955;MQSB=0.000120777;RPB=0.841891;SGB=52.3148;VDB=0.559918;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1300S|1366|LOC_Os09g25870|protein_coding|CODING|LOC_Os09g25870.1|7|1) FN2338.SNP.9:15531119 chr09:015531119 0 W/15531119-15531119 FN2338 SNP G -> T AC=1;AN=192;BQB=0.376391;DP=4580;DP4=2379,1898,19,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.39409e-17;MQSB=0.984727;RPB=0.801903;SGB=75.0722;VDB=0.1399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.9:15538225 chr09:015538225 0 W/15538225-15538225 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.984559;DP=2083;DP4=789,1215,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.39e-06;MQSB=0.884971;RPB=0.114311;SGB=44.5415;VDB=0.921911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.9:15542034 chr09:015542034 0 W/15542034-15542034 FN2136-S SNP C -> G AC=1;AN=168;BQB=0.0267062;DP=3839;DP4=2076,1736,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.72843e-05;MQSB=0.947703;RPB=0.789317;SGB=-60.2222;VDB=0.409408;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.9:15544917 chr09:015544917 0 W/15544917-15544917 FN762-S Single Base Substitution G-A INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN3740-S.SNP.9:15547202 chr09:015547202 0 W/15547202-15547202 FN3740-S SNP T -> A AC=1;AN=190;BQB=0.960546;DP=2637;DP4=1225,1328,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000232043;MQSB=0.957778;RPB=0.0861929;SGB=30.8803;VDB=0.0977173;EFF=STOP_GAINED(HIGH|NONSENSE|Aga/Tga|R550*|698|LOC_Os09g25900|protein_coding|CODING|LOC_Os09g25900.1|5|1) FN2795-S.SNP.9:15554983 chr09:015554983 0 W/15554983-15554983 FN2795-S SNP T -> C AC=1;AN=198;BQB=0.910095;DP=4593;DP4=2337,2071,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.29583e-10;MQSB=0.768403;RPB=0.485167;SGB=50.9344;VDB=0.522799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.9:15556328 chr09:015556328 0 W/15556328-15556328 FN3293-S SNP A -> T AC=1;AN=184;BQB=0.999365;DP=2832;DP4=1397,1345,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.3797e-08;MQSB=0.99741;RPB=0.238997;SGB=35.7479;VDB=0.504036;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.9:15565916 chr09:015565916 0 W/15565916-15565916 FN4064-S SNP G -> A AC=1;AN=168;BQB=0.298965;DP=2395;DP4=1219,1106,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00125379;MQSB=0.944408;RPB=0.752863;SGB=10.0307;VDB=0.288338;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.9:15568122 chr09:015568122 0 W/15568122-15568122 FN1625-S Single Base Substitution C-A INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:15568122 chr09:015568122 0 W/15568122-15568122 FN1626-S SNP C -> A AC=1;AN=188;BQB=0.645763;DP=3462;DP4=1694,1724,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.80036e-10;MQSB=0.990206;RPB=0.678233;SGB=-11.1967;VDB=0.110476;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.9:15571299 chr09:015571299 0 W/15571299-15571299 FN3881-S SNP G -> T AC=2;AN=158;BQB=0.68881;DP=2520;DP4=1205,1219,13,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.07136e-13;MQSB=0.768919;RPB=0.971811;SGB=77.8763;VDB=0.542623;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN1481-S Single Base Substitution G-A INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1755-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN1755-S SNP G -> A AC=1;AN=188;BQB=0.283424;DP=2034;DP4=1364,621,13,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.6656e-07;MQSB=0.965006;RPB=0.347406;SGB=20.9896;VDB=0.42647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN2247-S SNP G -> A AC=2;AN=190;BQB=0.450029;DP=3658;DP4=2030,1444,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.78194e-12;MQSB=0.0152492;RPB=0.587033;SGB=112.85;VDB=0.381075;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN3514-S SNP G -> A AC=2;AN=188;BQB=0.988943;DP=2808;DP4=1167,1551,19,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.03653e-17;MQSB=0.737447;RPB=0.68969;SGB=130.758;VDB=0.574856;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.997442;DP=2279;DP4=1059,1106,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49772e-14;MQSB=0.999137;RPB=0.999836;SGB=109.773;VDB=0.779589;EFF=INTERGENIC(MODIFIER||||||||||1) FN709-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN709-S Single Base Substitution G-A INTERGENIC HOMO SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN934-S.SNP.9:15572200 chr09:015572200 0 W/15572200-15572200 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN3426-S.SNP.9:15574360 chr09:015574360 0 W/15574360-15574360 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.992378;DP=2418;DP4=1218,1132,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.55266e-09;MQSB=0.945089;RPB=0.902646;SGB=57.786;VDB=0.375797;EFF=INTRON(MODIFIER||||114|LOC_Os09g25934|protein_coding|CODING|LOC_Os09g25934.1|3|1),INTRON(MODIFIER||||100|LOC_Os09g25934|protein_coding|CODING|LOC_Os09g25934.2|2|1) FN2354.SNP.9:15577718 chr09:015577718 0 W/15577718-15577718 FN2354 SNP C -> T AC=1;AN=192;BQB=0.807041;DP=4945;DP4=2455,2190,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.65964e-05;MQSB=0.996708;RPB=0.937262;SGB=1.09742;VDB=0.117656;EFF=INTRON(MODIFIER||||114|LOC_Os09g25934|protein_coding|CODING|LOC_Os09g25934.1|3|1),INTRON(MODIFIER||||100|LOC_Os09g25934|protein_coding|CODING|LOC_Os09g25934.2|2|1) FN2259-S.SNP.9:15582297 chr09:015582297 0 W/15582297-15582297 FN2259-S SNP C -> A AC=1;AN=190;BQB=0.921675;DP=3629;DP4=1362,1946,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000275558;MQB=0.000238473;MQSB=0.141424;RPB=0.996426;SGB=28.9929;VDB=0.284215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K110N|121|LOC_Os09g25945|protein_coding|CODING|LOC_Os09g25945.1|1|1) FN4111-S.SNP.9:15582297 chr09:015582297 0 W/15582297-15582297 FN4111-S SNP C -> A AC=1;AN=182;BQB=0.999566;DP=3029;DP4=1418,1510,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.2813e-10;MQSB=0.837253;RPB=0.995815;SGB=75.6874;VDB=0.277406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K110N|121|LOC_Os09g25945|protein_coding|CODING|LOC_Os09g25945.1|1|1) FN-250.SNP.9:15592429 chr09:015592429 0 W/15592429-15592429 FN-250 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN4016-S.SNP.9:15596009 chr09:015596009 0 W/15596009-15596009 FN4016-S SNP C -> T AC=1;AN=168;BQB=0.663536;DP=1987;DP4=1318,517,12,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.26545e-06;MQSB=0.0489659;RPB=0.995187;SGB=38.1788;VDB=0.202899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3557-S.SNP.9:15598767 chr09:015598767 0 W/15598767-15598767 FN3557-S SNP A -> C AC=2;AN=188;BQB=0.974522;DP=3083;DP4=1387,1605,24,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.1493e-21;MQSB=0.969467;RPB=0.680886;SGB=82.0286;VDB=0.793245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3534-S.SNP.9:15598906 chr09:015598906 0 W/15598906-15598906 FN3534-S SNP A -> C AC=1;AN=188;BQB=0.947481;DP=3154;DP4=1380,1657,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28294e-07;MQSB=0.838882;RPB=0.696993;SGB=28.8977;VDB=0.112032;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.9:15619329 chr09:015619329 0 W/15619329-15619329 FN454-S Single Base Substitution G-A INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN_N1-213-1.SNP.9:15625908 chr09:015625908 0 W/15625908-15625908 FN_N1-213-1 Single Base Substitution C-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2656-S.SNP.9:15644506 chr09:015644506 0 W/15644506-15644506 FN2656-S SNP T -> A AC=1;AN=200;BQB=0.996594;DP=2964;DP4=1392,1316,9,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00708502;MQB=0.000283619;MQSB=3.31003e-11;RPB=0.187832;SGB=81.8956;VDB=0.0463953;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.9:15647965 chr09:015647965 0 W/15647965-15647965 FN950-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g26030 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1657-S.SNP.9:15661595 chr09:015661595 0 W/15661595-15661595 FN1657-S Single Base Substitution G-A INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1627-S.SNP.9:15662786 chr09:015662786 0 W/15662786-15662786 FN1627-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN-182.SNP.9:15668681 chr09:015668681 0 W/15668681-15668681 FN-182 Single Base Substitution T-A INTERGENIC HOMO SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN1339-S.SNP.9:15668779 chr09:015668779 0 W/15668779-15668779 FN1339-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2230-S.SNP.9:15669931 chr09:015669931 0 W/15669931-15669931 FN2230-S SNP C -> T AC=1;AN=190;BQB=0.262989;DP=5307;DP4=2377,2537,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00018843;MQB=1.4388e-10;MQSB=0.927876;RPB=0.846476;SGB=53.8699;VDB=0.00750672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.9:15669932 chr09:015669932 0 W/15669932-15669932 FN2230-S SNP C -> T AC=1;AN=190;BQB=0.443213;DP=5303;DP4=2386,2571,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.98639e-10;MQSB=0.98196;RPB=0.966487;SGB=-39.0012;VDB=0.0183632;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.9:15678278 chr09:015678278 0 W/15678278-15678278 FN3543-S SNP A -> T AC=1;AN=188;BQB=0.344986;DP=2807;DP4=1446,1276,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000515867;MQSB=0.99115;RPB=0.700538;SGB=21.8113;VDB=0.565813;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.9:15678365 chr09:015678365 0 W/15678365-15678365 FN461-S Single Base Substitution G-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN1057-S.SNP.9:15681640 chr09:015681640 0 W/15681640-15681640 FN1057-S Single Base Substitution G-A INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1473-S.SNP.9:15683814 chr09:015683814 0 W/15683814-15683814 FN1473-S Single Base Substitution A-G INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN551-S.SNP.9:15688043 chr09:015688043 0 W/15688043-15688043 FN551-S Single Base Substitution G-C INTRON HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3520-S.SNP.9:15692691 chr09:015692691 0 W/15692691-15692691 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.990658;DP=2765;DP4=1323,1353,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.44937e-12;MQSB=0.994183;RPB=0.544383;SGB=89.8686;VDB=0.800683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.9:15693204 chr09:015693204 0 W/15693204-15693204 FN2659-S SNP T -> C AC=1;AN=200;BQB=0.723619;DP=4943;DP4=2504,2181,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.43126e-14;MQSB=0.99;RPB=0.421787;SGB=19.1209;VDB=0.0782356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N221S|322|LOC_Os09g26090|protein_coding|CODING|LOC_Os09g26090.1|1|1) FN906-S.SNP.9:15695957 chr09:015695957 0 W/15695957-15695957 FN906-S Single Base Substitution G-A INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN-350.SNP.9:15696270 chr09:015696270 0 W/15696270-15696270 FN-350 Single Base Substitution G-A INTERGENIC HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN794-S.SNP.9:15701524 chr09:015701524 0 W/15701524-15701524 FN794-S Single Base Substitution A-G INTERGENIC HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1602-S.SNP.9:15703674 chr09:015703674 0 W/15703674-15703674 FN1602-S Single Base Substitution G-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN4112-S.SNP.9:15717959 chr09:015717959 0 W/15717959-15717959 FN4112-S SNP T -> C AC=1;AN=182;BQB=0.608443;DP=1790;DP4=797,937,2,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00246189;MQSB=0.987467;RPB=0.908599;SGB=30.5793;VDB=0.683425;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.9:15718130 chr09:015718130 0 W/15718130-15718130 FN730-S Single Base Substitution G-T INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN2338.SNP.9:15719708 chr09:015719708 0 W/15719708-15719708 FN2338 SNP A -> T AC=1;AN=192;BQB=0.153969;DP=5211;DP4=2530,2082,31,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.53675e-29;MQSB=0.877096;RPB=0.395979;SGB=58.9783;VDB=0.967658;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.9:15720519 chr09:015720519 0 W/15720519-15720519 FN-156 Single Base Substitution C-T INTERGENIC HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3627-S.SNP.9:15721322 chr09:015721322 0 W/15721322-15721322 FN3627-S SNP A -> T AC=1;AN=190;BQB=0.9692;DP=2619;DP4=1337,1168,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34318e-08;MQSB=0.942639;RPB=0.933957;SGB=18.552;VDB=0.568959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.9:15725157 chr09:015725157 0 W/15725157-15725157 FN1695-S SNP T -> A AC=1;AN=188;BQB=0.434522;DP=3691;DP4=2083,1565,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.33886e-08;MQSB=0.945122;RPB=0.473659;SGB=14.798;VDB=0.611745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.9:15726055 chr09:015726055 0 W/15726055-15726055 FN2106-S SNP A -> G AC=2;AN=168;BQB=0.653814;DP=2747;DP4=1029,1686,5,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.33531e-09;MQSB=0.963063;RPB=0.418303;SGB=55.3328;VDB=0.442214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.9:15727635 chr09:015727635 0 W/15727635-15727635 FN2202-S SNP G -> A AC=1;AN=190;BQB=0.49545;DP=2053;DP4=542,1416,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57893e-08;MQSB=0.992673;RPB=0.999978;SGB=62.7569;VDB=0.58417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.9:15728607 chr09:015728607 0 W/15728607-15728607 FN2781-S SNP T -> C AC=1;AN=198;BQB=0.999378;DP=4221;DP4=1934,1952,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.00781805;MQB=0.0110503;MQSB=0;RPB=0.16733;SGB=50.1053;VDB=0.234982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.9:15733328 chr09:015733328 0 W/15733328-15733328 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.370286;DP=1438;DP4=766,634,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0841446;MQB=0.075432;MQSB=0.000927631;RPB=0.834218;SGB=44.4357;VDB=0.270781;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.9:15740972 chr09:015740972 0 W/15740972-15740972 FN-191 Single Base Substitution G-A INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN-191.SNP.9:15740973 chr09:015740973 0 W/15740973-15740973 FN-191 Single Base Substitution G-A INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1468-S.SNP.9:15750896 chr09:015750896 0 W/15750896-15750896 FN1468-S Single Base Substitution G-A INTERGENIC Homo SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN-269.SNP.9:15758033 chr09:015758033 0 W/15758033-15758033 FN-269 Single Base Substitution G-A INTRON HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2183-S.SNP.9:15760867 chr09:015760867 0 W/15760867-15760867 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.910401;DP=4595;DP4=2131,2196,9,21;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000652884;MQB=2.57132e-07;MQSB=2.71192e-16;RPB=0.886836;SGB=131.065;VDB=0.620355;EFF=INTRON(MODIFIER||||955|LOC_Os09g26144|protein_coding|CODING|LOC_Os09g26144.1|2|1) FN1114-S.SNP.9:15765432 chr09:015765432 0 W/15765432-15765432 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN4230-S.SNP.9:15778514 chr09:015778514 0 W/15778514-15778514 FN4230-S SNP T -> A AC=1;AN=170;BQB=0.937027;DP=2622;DP4=1289,1256,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.09983e-05;MQSB=0.991145;RPB=0.517312;SGB=34.5445;VDB=0.314028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.9:15779636 chr09:015779636 0 W/15779636-15779636 FN3710-S SNP A -> C AC=1;AN=190;BQB=0.173213;DP=2845;DP4=1432,1321,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97348e-06;MQSB=0.955476;RPB=0.402061;SGB=-14.8836;VDB=0.473815;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.9:15787703 chr09:015787703 0 W/15787703-15787703 FN1670-S SNP C -> T AC=1;AN=188;BQB=3.50351e-06;DP=2274;DP4=1408,828,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4096e-07;MQSB=0.997274;RPB=0.950129;SGB=-35.5377;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.9:15809280 chr09:015809280 0 W/15809280-15809280 FN2171-S SNP G -> A AC=2;AN=168;BQB=0.0210469;DP=2290;DP4=680,1555,5,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.28888e-13;MQSB=0.928933;RPB=0.564564;SGB=18.4989;VDB=0.0941086;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.9:15810953 chr09:015810953 0 W/15810953-15810953 FN1075-S Single Base Substitution G-C INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN2142-S.SNP.9:15815397 chr09:015815397 0 W/15815397-15815397 FN2142-S SNP A -> T AC=1;AN=168;BQB=0.169335;DP=3702;DP4=1946,1728,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.20638e-05;MQSB=0.996393;RPB=0.886574;SGB=-34.9514;VDB=0.5463;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.9:15817659 chr09:015817659 0 W/15817659-15817659 FN_812-4-1 Single Base Substitution C-T Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1204-S.SNP.9:15819126 chr09:015819126 0 W/15819126-15819126 FN1204-S Single Base Substitution C-T INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN995-S.SNP.9:15819792 chr09:015819792 0 W/15819792-15819792 FN995-S Single Base Substitution C-A INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1548-S.SNP.9:15830749 chr09:015830749 0 W/15830749-15830749 FN1548-S SNP G -> A AC=1;AN=188;BQB=0.381933;DP=1645;DP4=829,779,3,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000315994;MQSB=0.97225;RPB=0.678567;SGB=21.722;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.9:15836653 chr09:015836653 0 W/15836653-15836653 FN-140 Single Base Substitution T-A INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN-140.SNP.9:15836654 chr09:015836654 0 W/15836654-15836654 FN-140 Single Base Substitution T-A INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2177-S.SNP.9:15837953 chr09:015837953 0 W/15837953-15837953 FN2177-S SNP G -> C AC=2;AN=168;BQB=0.994181;DP=1915;DP4=697,1168,6,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.67768e-07;MQSB=0.994974;RPB=0.867811;SGB=56.6036;VDB=0.666721;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.9:15837953 chr09:015837953 0 W/15837953-15837953 FN3360-S SNP G -> C AC=2;AN=184;BQB=0.982145;DP=2787;DP4=1554,1121,14,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.42284e-17;MQSB=0.967775;RPB=0.936215;SGB=130.135;VDB=0.241119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.9:15838597 chr09:015838597 0 W/15838597-15838597 FN1152-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN-411.SNP.9:15841345 chr09:015841345 0 W/15841345-15841345 FN-411 Single Base Substitution A-G INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1439-S.SNP.9:15848822 chr09:015848822 0 W/15848822-15848822 FN1439-S Single Base Substitution G-A INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2411.SNP.9:15862086 chr09:015862086 0 W/15862086-15862086 FN2411 SNP C -> T AC=1;AN=200;BQB=0.851804;DP=4240;DP4=1671,2314,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09409e-09;MQSB=0.66098;RPB=0.998905;SGB=29.4849;VDB=0.657732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.9:15865712 chr09:015865712 0 W/15865712-15865712 FN2217-S SNP G -> T AC=2;AN=190;BQB=0.245549;DP=4209;DP4=2159,1587,19,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000237586;MQB=1.57628e-16;MQSB=0.980787;RPB=0.940895;SGB=-44.3547;VDB=0.905072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.9:15866289 chr09:015866289 0 W/15866289-15866289 FN1279-S Single Base Substitution T-A INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3039-S.SNP.9:15872099 chr09:015872099 0 W/15872099-15872099 FN3039-S SNP A -> C AC=2;AN=184;BQB=0.753709;DP=3092;DP4=1742,1231,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.52917e-14;MQSB=0.994212;RPB=0.402222;SGB=125.613;VDB=0.67853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.9:15873733 chr09:015873733 0 W/15873733-15873733 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.0513025;DP=3357;DP4=1503,1804,22,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.59176e-11;MQSB=0.44215;RPB=0.885501;SGB=-250.167;VDB=0.348317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.9:15885703 chr09:015885703 0 W/15885703-15885703 FN-248 Single Base Substitution A-G INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3985-S.SNP.9:15894407 chr09:015894407 0 W/15894407-15894407 FN3985-S SNP G -> T AC=1;AN=168;BQB=0.969344;DP=2384;DP4=1105,1195,6,16;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0499161;MQB=0.000276439;MQSB=1.4098e-08;RPB=0.901669;SGB=39.2004;VDB=0.150779;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.9:15896444 chr09:015896444 0 W/15896444-15896444 FN321-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN3481-S.SNP.9:15903355 chr09:015903355 0 W/15903355-15903355 FN3481-S SNP A -> T AC=1;AN=184;BQB=0.687013;DP=3015;DP4=1402,1526,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.96514e-07;MQSB=0.999877;RPB=0.349542;SGB=28.3187;VDB=0.395955;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.9:15903374 chr09:015903374 0 W/15903374-15903374 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.947584;DP=2767;DP4=1193,1368,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.32511e-07;MQSB=0.819151;RPB=0.0595633;SGB=21.4493;VDB=0.234625;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.9:15905210 chr09:015905210 0 W/15905210-15905210 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3761-S.SNP.9:15907159 chr09:015907159 0 W/15907159-15907159 FN3761-S SNP A -> G AC=1;AN=190;BQB=0.0766452;DP=2828;DP4=1105,1488,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0364215;MQB=0.81862;MQSB=0.954851;RPB=0.0657636;SGB=5.66499;VDB=0.182473;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.9:15909156 chr09:015909156 0 W/15909156-15909156 FN1102-S Single Base Substitution T-C INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN406-S.SNP.9:15911523 chr09:015911523 0 W/15911523-15911523 FN406-S Single Base Substitution G-A INTERGENIC HOMO SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN351-S.SNP.9:15916300 chr09:015916300 0 W/15916300-15916300 FN351-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1351-S.SNP.9:15916815 chr09:015916815 0 W/15916815-15916815 FN1351-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g26350 expressed protein SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN-281.SNP.9:15917548 chr09:015917548 0 W/15917548-15917548 FN-281 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g26350 expressed protein SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-281.SNP.9:15917554 chr09:015917554 0 W/15917554-15917554 FN-281 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g26350 expressed protein SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2366.SNP.9:15920249 chr09:015920249 0 W/15920249-15920249 FN2366 SNP A -> T AC=2;AN=192;BQB=0.21017;DP=4861;DP4=2431,2110,26,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.23446e-28;MQSB=0.921782;RPB=0.7466;SGB=108.409;VDB=0.274902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.9:15920521 chr09:015920521 0 W/15920521-15920521 FN2685-S SNP A -> G AC=1;AN=200;BQB=0.979179;DP=5073;DP4=2461,2445,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000197122;MQB=1.7896e-07;MQSB=0.947951;RPB=0.997869;SGB=36.6644;VDB=0.879517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.9:15924947 chr09:015924947 0 W/15924947-15924947 FN3050-S SNP G -> A AC=1;AN=184;BQB=0.753273;DP=3221;DP4=1329,1813,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.91479e-12;MQSB=0.987794;RPB=0.711671;SGB=30.8405;VDB=0.910812;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.9:15927592 chr09:015927592 0 W/15927592-15927592 FN1506-S Single Base Substitution G-T INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1506-S.SNP.9:15927594 chr09:015927594 0 W/15927594-15927594 FN1506-S Single Base Substitution G-T INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN2492.SNP.9:15930720 chr09:015930720 0 W/15930720-15930720 FN2492 SNP A -> G AC=1;AN=200;BQB=0.112674;DP=3756;DP4=1573,1750,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.16569e-05;MQSB=0.551489;RPB=0.949613;SGB=6.27959;VDB=0.726572;EFF=INTRON(MODIFIER||||486|LOC_Os09g26380|protein_coding|CODING|LOC_Os09g26380.1|1|1) FN3607-S.SNP.9:15932587 chr09:015932587 0 W/15932587-15932587 FN3607-S SNP C -> A AC=1;AN=190;BQB=0.915182;DP=2620;DP4=1487,1049,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.67786e-05;MQSB=0.998832;RPB=0.923991;SGB=35.4339;VDB=0.48031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P60H|486|LOC_Os09g26380|protein_coding|CODING|LOC_Os09g26380.1|4|1) W7-1-1.SNP.9:15944120 chr09:015944120 0 W/15944120-15944120 W7-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1027-S.SNP.9:15950448 chr09:015950448 0 W/15950448-15950448 FN1027-S Single Base Substitution C-G INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN3514-S.SNP.9:15966376 chr09:015966376 0 W/15966376-15966376 FN3514-S SNP C -> T AC=2;AN=188;BQB=0.915775;DP=3169;DP4=1276,1759,16,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62002e-16;MQSB=0.855928;RPB=0.998335;SGB=117.128;VDB=0.873995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.9:15968487 chr09:015968487 0 W/15968487-15968487 FN1421-S Single Base Substitution C-G INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2311.SNP.9:15971281 chr09:015971281 0 W/15971281-15971281 FN2311 SNP G -> A AC=2;AN=192;BQB=0.904492;DP=4833;DP4=2208,2178,24,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.48458e-25;MQSB=0.657746;RPB=0.929103;SGB=157.404;VDB=0.511345;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.9:15980170 chr09:015980170 0 W/15980170-15980170 FN-89 Single Base Substitution A-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3462-S.SNP.9:15981803 chr09:015981803 0 W/15981803-15981803 FN3462-S SNP A -> T AC=2;AN=184;BQB=0.994838;DP=3343;DP4=1300,1887,10,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.01195e-15;MQSB=0.732245;RPB=0.9295;SGB=85.0529;VDB=0.188221;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.9:15984293 chr09:015984293 0 W/15984293-15984293 FN537-S Single Base Substitution A-G INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN517-S.SNP.9:15985263 chr09:015985263 0 W/15985263-15985263 FN517-S Single Base Substitution T-C INTRON HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN733-S.SNP.9:15986739 chr09:015986739 0 W/15986739-15986739 FN733-S Single Base Substitution G-T INTRON HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN733-S.SNP.9:15986740 chr09:015986740 0 W/15986740-15986740 FN733-S Single Base Substitution T-G INTRON HET SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN2788-S.SNP.9:15988146 chr09:015988146 0 W/15988146-15988146 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.843132;DP=3530;DP4=1708,1652,10,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.36043e-13;MQSB=0.998894;RPB=0.542048;SGB=118.476;VDB=0.251927;EFF=INTRON(MODIFIER||||296|LOC_Os09g26460|protein_coding|CODING|LOC_Os09g26460.1|1|1) FN955-S.SNP.9:15989219 chr09:015989219 0 W/15989219-15989219 FN955-S Single Base Substitution G-T INTRON HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN854-S.SNP.9:15999346 chr09:015999346 0 W/15999346-15999346 FN854-S Single Base Substitution C-T INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN_789-2-1.SNP.9:16001476 chr09:016001476 0 W/16001476-16001476 FN_789-2-1 Single Base Substitution T-C HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN1440-S.SNP.9:16005060 chr09:016005060 0 W/16005060-16005060 FN1440-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN512-S.SNP.9:16009483 chr09:016009483 0 W/16009483-16009483 FN512-S Single Base Substitution T-C INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1036-S.SNP.9:16010387 chr09:016010387 0 W/16010387-16010387 FN1036-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g26490 alpha/beta hydrolase fold, putative, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN-154.SNP.9:16010608 chr09:016010608 0 W/16010608-16010608 FN-154 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3468-S.SNP.9:16021363 chr09:016021363 0 W/16021363-16021363 FN3468-S SNP T -> C AC=1;AN=184;BQB=0.910909;DP=3022;DP4=1349,1515,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.94035e-13;MQSB=0.948798;RPB=0.873802;SGB=63.9222;VDB=0.878147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.9:16022439 chr09:016022439 0 W/16022439-16022439 FN2419 SNP C -> T AC=1;AN=200;BQB=0.817665;DP=4726;DP4=2147,2190,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.16454e-09;MQSB=0.780099;RPB=0.85348;SGB=3.06925;VDB=0.180626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.9:16024299 chr09:016024299 0 W/16024299-16024299 FN2702-S SNP T -> C AC=2;AN=200;BQB=0.877767;DP=5144;DP4=2429,2475,30,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.29311e-27;MQSB=0.9927;RPB=0.423561;SGB=144.819;VDB=0.448959;EFF=INTRON(MODIFIER||||314|LOC_Os09g26520|protein_coding|CODING|LOC_Os09g26520.1|1|1) FN876-S.SNP.9:16024299 chr09:016024299 0 W/16024299-16024299 FN876-S Single Base Substitution T-C INTRON HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN-304.SNP.9:16029429 chr09:016029429 0 W/16029429-16029429 FN-304 Single Base Substitution C-A UTR_3_PRIME HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-30.SNP.9:16033820 chr09:016033820 0 W/16033820-16033820 FN-30 Single Base Substitution T-A INTRON HET SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN3383-S.SNP.9:16033820 chr09:016033820 0 W/16033820-16033820 FN3383-S SNP T -> A AC=1;AN=184;BQB=0.980802;DP=2643;DP4=1195,1299,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000378358;MQB=3.68265e-06;MQSB=0.564731;RPB=0.973726;SGB=39.2697;VDB=0.141446;EFF=INTRON(MODIFIER||||290|LOC_Os09g26530|protein_coding|CODING|LOC_Os09g26530.1|2|1) FN3454-S.SNP.9:16033820 chr09:016033820 0 W/16033820-16033820 FN3454-S SNP T -> A AC=2;AN=184;BQB=0.944994;DP=2505;DP4=1122,1241,12,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.32641e-13;MQSB=0.388101;RPB=0.415482;SGB=-8.45255;VDB=0.516852;EFF=INTRON(MODIFIER||||290|LOC_Os09g26530|protein_coding|CODING|LOC_Os09g26530.1|2|1) FN3776-S.SNP.9:16033820 chr09:016033820 0 W/16033820-16033820 FN3776-S SNP T -> A AC=1;AN=190;BQB=0.975382;DP=2219;DP4=1090,1020,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000450653;MQB=0.00180518;MQSB=0.634461;RPB=0.400912;SGB=26.3271;VDB=0.262259;EFF=INTRON(MODIFIER||||290|LOC_Os09g26530|protein_coding|CODING|LOC_Os09g26530.1|2|1) FN3650-S.SNP.9:16035433 chr09:016035433 0 W/16035433-16035433 FN3650-S SNP G -> C AC=1;AN=190;BQB=0.999987;DP=2525;DP4=1199,1204,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.03658e-13;MQSB=0.994793;RPB=0.00516957;SGB=90.0802;VDB=0.10976;EFF=INTERGENIC(MODIFIER||||||||||1) FN1190-S.SNP.9:16038415 chr09:016038415 0 W/16038415-16038415 FN1190-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN4304-S.SNP.9:16038415 chr09:016038415 0 W/16038415-16038415 FN4304-S SNP G -> A AC=2;AN=170;BQB=0.95012;DP=1469;DP4=557,840,3,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000680735;MQB=1.06525e-08;MQSB=0.760491;RPB=0.51316;SGB=61.2001;VDB=0.827881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1719-S.SNP.9:16039237 chr09:016039237 0 W/16039237-16039237 FN1719-S SNP T -> C AC=2;AN=188;BQB=0.0219793;DP=2541;DP4=847,1643,14,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.1592e-11;MQSB=0.956706;RPB=0.990381;SGB=-113.464;VDB=0.478465;EFF=UTR_3_PRIME(MODIFIER||212||394|LOC_Os09g26540|protein_coding|CODING|LOC_Os09g26540.2|11|1),INTRON(MODIFIER||||400|LOC_Os09g26540|protein_coding|CODING|LOC_Os09g26540.1|10|1) FN2333.SNP.9:16039480 chr09:016039480 0 W/16039480-16039480 FN2333 SNP C -> A AC=1;AN=192;BQB=0.927544;DP=4196;DP4=1973,1906,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000238322;MQB=1.21719e-10;MQSB=9.96093e-18;RPB=0.999489;SGB=46.8644;VDB=0.291682;EFF=INTRON(MODIFIER||||400|LOC_Os09g26540|protein_coding|CODING|LOC_Os09g26540.1|10|1),INTRON(MODIFIER||||394|LOC_Os09g26540|protein_coding|CODING|LOC_Os09g26540.2|10|1) FN1118-S.SNP.9:16040651 chr09:016040651 0 W/16040651-16040651 FN1118-S Single Base Substitution G-T INTRON HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1118-S.SNP.9:16040652 chr09:016040652 0 W/16040652-16040652 FN1118-S Single Base Substitution C-T INTRON HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1118-S.SNP.9:16040653 chr09:016040653 0 W/16040653-16040653 FN1118-S Single Base Substitution C-T INTRON HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1763-S.SNP.9:16050646 chr09:016050646 0 W/16050646-16050646 FN1763-S SNP G -> T AC=1;AN=188;BQB=0.04919;DP=3761;DP4=2094,1636,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30246e-06;MQSB=0.984603;RPB=0.706854;SGB=-58.9891;VDB=0.595453;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R3I|456|LOC_Os09g26550|protein_coding|CODING|LOC_Os09g26550.2|2|1) FN4203-S.SNP.9:16051478 chr09:016051478 0 W/16051478-16051478 FN4203-S SNP A -> G AC=1;AN=170;BQB=0.99903;DP=2570;DP4=1151,1329,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.69667e-12;MQSB=0.901387;RPB=0.999444;SGB=55.5339;VDB=0.628718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K143R|456|LOC_Os09g26550|protein_coding|CODING|LOC_Os09g26550.2|6|1) FN2765-S.SNP.9:16051747 chr09:016051747 0 W/16051747-16051747 FN2765-S SNP C -> G AC=1;AN=198;BQB=0.904193;DP=4191;DP4=2270,1671,14,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.7854e-13;MQSB=0.954494;RPB=0.714837;SGB=61.7198;VDB=0.103543;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Ggt|R205G|456|LOC_Os09g26550|protein_coding|CODING|LOC_Os09g26550.2|7|1) FN-231.SNP.9:16081181 chr09:016081181 0 W/16081181-16081181 FN-231 Single Base Substitution T-C INTRON HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN3992-S.SNP.9:16089042 chr09:016089042 0 W/16089042-16089042 FN3992-S SNP G -> A AC=2;AN=168;BQB=0.996558;DP=2651;DP4=1257,1282,12,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.93292e-17;MQSB=0.994609;RPB=0.187311;SGB=114.204;VDB=0.740981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.9:16094428 chr09:016094428 0 W/16094428-16094428 FN3798-S SNP T -> C AC=2;AN=190;BQB=0.87333;DP=2518;DP4=1167,1273,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.82481e-10;MQSB=0.958944;RPB=0.513271;SGB=80.9724;VDB=0.0664747;EFF=INTRON(MODIFIER||||299|LOC_Os09g26570|protein_coding|CODING|LOC_Os09g26570.1|1|1) FN3576-S.SNP.9:16095427 chr09:016095427 0 W/16095427-16095427 FN3576-S SNP A -> G AC=2;AN=188;BQB=0.195955;DP=2804;DP4=1282,1428,8,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.24862e-10;MQSB=0.997073;RPB=0.869382;SGB=108.042;VDB=0.749219;EFF=INTRON(MODIFIER||||299|LOC_Os09g26570|protein_coding|CODING|LOC_Os09g26570.1|3|1) FN1162-S.SNP.9:16116029 chr09:016116029 0 W/16116029-16116029 FN1162-S Single Base Substitution T-C INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN619-S.SNP.9:16125487 chr09:016125487 0 W/16125487-16125487 FN619-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN1314-S.SNP.9:16132008 chr09:016132008 0 W/16132008-16132008 FN1314-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN922-S.SNP.9:16133916 chr09:016133916 0 W/16133916-16133916 FN922-S Single Base Substitution G-A INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN873-S.SNP.9:16139103 chr09:016139103 0 W/16139103-16139103 FN873-S Single Base Substitution T-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3851-S.SNP.9:16141038 chr09:016141038 0 W/16141038-16141038 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.610084;DP=2252;DP4=1165,1010,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000846788;MQSB=0.00194768;RPB=0.190204;SGB=44.1818;VDB=0.289477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.9:16141239 chr09:016141239 0 W/16141239-16141239 FN2698-S SNP A -> G AC=1;AN=200;BQB=0.159395;DP=4703;DP4=2508,2004,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.96149e-10;MQSB=0.692665;RPB=0.489815;SGB=45.1159;VDB=0.676633;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.9:16144705 chr09:016144705 0 W/16144705-16144705 FN1575-S Single Base Substitution G-A INTERGENIC HET SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN_822-5-1.SNP.9:16146077 chr09:016146077 0 W/16146077-16146077 FN_822-5-1 Single Base Substitution G-A Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1265-S.SNP.9:16149906 chr09:016149906 0 W/16149906-16149906 FN1265-S Single Base Substitution C-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2666-S.SNP.9:16153647 chr09:016153647 0 W/16153647-16153647 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.999032;DP=4015;DP4=1913,1799,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20634e-16;MQSB=0.919411;RPB=0.972905;SGB=94.3471;VDB=0.316483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A50V|108|LOC_Os09g26620|protein_coding|CODING|LOC_Os09g26620.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A50V|146|LOC_Os09g26620|protein_coding|CODING|LOC_Os09g26620.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A50V|144|LOC_Os09g26620|protein_coding|CODING|LOC_Os09g26620.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A50V|108|LOC_Os09g26620|protein_coding|CODING|LOC_Os09g26620.5|2|1),INTRON(MODIFIER||||76|LOC_Os09g26620|protein_coding|CODING|LOC_Os09g26620.4|2|1) FN3322-S.SNP.9:16156899 chr09:016156899 0 W/16156899-16156899 FN3322-S SNP G -> A AC=1;AN=184;BQB=0.989411;DP=2306;DP4=1059,1186,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000433651;MQB=4.04275e-05;MQSB=0.0865012;RPB=0.685225;SGB=30.6558;VDB=0.00796861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.9:16157564 chr09:016157564 0 W/16157564-16157564 FN3417-S SNP T -> C AC=1;AN=184;BQB=0.935425;DP=2391;DP4=1249,1067,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00083647;MQB=1.7008e-06;MQSB=0.981715;RPB=0.600043;SGB=57.786;VDB=0.561073;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.9:16160469 chr09:016160469 0 W/16160469-16160469 FN922-S Single Base Substitution C-A INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2639-S.SNP.9:16164276 chr09:016164276 0 W/16164276-16164276 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.560132;DP=3937;DP4=1992,1737,7,19;HOB=5e-05;ICB=0.0001005;MQ=13;MQ0F=0.409957;MQB=0.000636343;MQSB=0;RPB=0.582846;SGB=114.132;VDB=0.636098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H531Y|1111|LOC_Os09g26640|protein_coding|CODING|LOC_Os09g26640.1|3|1) FN1363-S.SNP.9:16167597 chr09:016167597 0 W/16167597-16167597 FN1363-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2167-S.SNP.9:16172299 chr09:016172299 0 W/16172299-16172299 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.551967;DP=3609;DP4=1807,1758,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.17146e-05;MQSB=0.937632;RPB=0.983682;SGB=24.6155;VDB=0.33843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S59N|181|LOC_Os09g26650|protein_coding|CODING|LOC_Os09g26650.1|3|1) FN2316.SNP.9:16172846 chr09:016172846 0 W/16172846-16172846 FN2316 SNP G -> T AC=2;AN=192;BQB=0.92375;DP=5416;DP4=2504,2320,26,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.7979e-33;MQSB=0.985948;RPB=0.328418;SGB=193.047;VDB=0.454779;EFF=INTRON(MODIFIER||||181|LOC_Os09g26650|protein_coding|CODING|LOC_Os09g26650.1|3|1) FN3764-S.SNP.9:16175658 chr09:016175658 0 W/16175658-16175658 FN3764-S SNP A -> G AC=1;AN=190;BQB=0.730838;DP=2882;DP4=1412,1388,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.96632e-06;MQSB=0.996173;RPB=0.380023;SGB=32.5467;VDB=0.158054;EFF=UTR_3_PRIME(MODIFIER||185||181|LOC_Os09g26650|protein_coding|CODING|LOC_Os09g26650.1|7|1) FN3430-S.SNP.9:16177835 chr09:016177835 0 W/16177835-16177835 FN3430-S SNP A -> G AC=1;AN=184;BQB=0.386053;DP=2164;DP4=893,1218,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98343e-06;MQSB=0.999481;RPB=0.522717;SGB=35.7479;VDB=0.301225;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.9:16181386 chr09:016181386 0 W/16181386-16181386 FN421-S Single Base Substitution A-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN3838-S.SNP.9:16194153 chr09:016194153 0 W/16194153-16194153 FN3838-S SNP T -> A AC=1;AN=190;BQB=0.928426;DP=2829;DP4=1420,1289,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.55044e-07;MQSB=0.999409;RPB=0.662779;SGB=10.8904;VDB=0.646725;EFF=INTRON(MODIFIER||||1007|LOC_Os09g26660|protein_coding|CODING|LOC_Os09g26660.1|6|1) FN-15.SNP.9:16199623 chr09:016199623 0 W/16199623-16199623 FN-15 Single Base Substitution C-G INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN3722-S.SNP.9:16204207 chr09:016204207 0 W/16204207-16204207 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.920431;DP=2900;DP4=1720,1060,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=15;MQ0F=0.444828;MQB=0.148483;MQSB=0;RPB=0.828827;SGB=85.5263;VDB=0.0759661;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M63I|1159|LOC_Os09g26680|protein_coding|CODING|LOC_Os09g26680.1|2|1) FN-147.SNP.9:16210081 chr09:016210081 0 W/16210081-16210081 FN-147 Single Base Substitution C-G INTRON HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN-400.SNP.9:16210852 chr09:016210852 0 W/16210852-16210852 FN-400 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g26680 transposon protein, putative, Ac/Ds sub-class, expressed SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.9:16210852 chr09:016210852 0 W/16210852-16210852 FN400-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g26680 transposon protein, putative, Ac/Ds sub-class, expressed SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN1512-S.SNP.9:16211592 chr09:016211592 0 W/16211592-16211592 FN1512-S Single Base Substitution C-T INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1448-S.SNP.9:16217871 chr09:016217871 0 W/16217871-16217871 FN1448-S Single Base Substitution T-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-35.SNP.9:16224551 chr09:016224551 0 W/16224551-16224551 FN-35 Single Base Substitution G-A INTERGENIC Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN3533-S.SNP.9:16225255 chr09:016225255 0 W/16225255-16225255 FN3533-S SNP G -> A AC=2;AN=188;BQB=0.887533;DP=2869;DP4=1091,1689,4,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.69016e-08;MQSB=0.969095;RPB=0.630938;SGB=53.5223;VDB=0.439007;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A29|388|LOC_Os09g26700|protein_coding|CODING|LOC_Os09g26700.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A29|271|LOC_Os09g26700|protein_coding|CODING|LOC_Os09g26700.2|1|1) FN2246-S.SNP.9:16229206 chr09:016229206 0 W/16229206-16229206 FN2246-S SNP T -> C AC=2;AN=190;BQB=0.851038;DP=5100;DP4=2539,2276,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000196078;MQB=1.35678e-22;MQSB=0.998818;RPB=0.868453;SGB=95.1683;VDB=0.108039;EFF=UTR_3_PRIME(MODIFIER||180||388|LOC_Os09g26700|protein_coding|CODING|LOC_Os09g26700.1|11|1) FN552-S.SNP.9:16235630 chr09:016235630 0 W/16235630-16235630 FN552-S Single Base Substitution C-T INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN-286.SNP.9:16236388 chr09:016236388 0 W/16236388-16236388 FN-286 Single Base Substitution T-C INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2634-S.SNP.9:16248012 chr09:016248012 0 W/16248012-16248012 FN2634-S SNP G -> T AC=1;AN=200;BQB=0.419418;DP=4907;DP4=2445,2208,18,19;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000203791;MQB=1.67523e-20;MQSB=0.789453;RPB=0.689835;SGB=81.5883;VDB=0.0294162;EFF=INTERGENIC(MODIFIER||||||||||1) FN-15.SNP.9:16250459 chr09:016250459 0 W/16250459-16250459 FN-15 Single Base Substitution C-T INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN-195.SNP.9:16256949 chr09:016256949 0 W/16256949-16256949 FN-195 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g26760 DNA repair metallo-beta-lactamase family protein, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3786-S.SNP.9:16257694 chr09:016257694 0 W/16257694-16257694 FN3786-S SNP G -> A AC=1;AN=190;BQB=0.945702;DP=3144;DP4=1177,1868,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.40274e-05;MQSB=0.994099;RPB=0.772501;SGB=30.8803;VDB=0.299782;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.9:16275736 chr09:016275736 0 W/16275736-16275736 FN1481-S Single Base Substitution G-C INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3445-S.SNP.9:16281336 chr09:016281336 0 W/16281336-16281336 FN3445-S SNP A -> C AC=2;AN=184;BQB=0.959828;DP=3044;DP4=1660,1106,8,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.73957e-05;MQSB=0.169002;RPB=0.947001;SGB=35.7479;VDB=0.54971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.9:16282015 chr09:016282015 0 W/16282015-16282015 FN2676-S SNP G -> C AC=1;AN=200;BQB=0.247103;DP=4579;DP4=2378,1942,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11355e-08;MQSB=0.843651;RPB=0.352789;SGB=4.67442;VDB=0.479998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.9:16286071 chr09:016286071 0 W/16286071-16286071 FN3358-S SNP T -> G AC=1;AN=184;BQB=0.967898;DP=2770;DP4=1280,1418,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35404e-08;MQSB=0.986893;RPB=0.999934;SGB=57.786;VDB=0.688029;EFF=INTRON(MODIFIER||||526|LOC_Os09g26800|protein_coding|CODING|LOC_Os09g26800.1|4|1) FN3681-S.SNP.9:16289616 chr09:016289616 0 W/16289616-16289616 FN3681-S SNP T -> A AC=2;AN=190;BQB=0.992185;DP=3267;DP4=1705,1393,30,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.05762e-23;MQSB=0.625376;RPB=0.442361;SGB=194.819;VDB=0.296933;EFF=INTRON(MODIFIER||||264|LOC_Os09g26810|protein_coding|CODING|LOC_Os09g26810.1|3|1) FN4241-S.SNP.9:16291784 chr09:016291784 0 W/16291784-16291784 FN4241-S SNP G -> T AC=2;AN=170;BQB=0.590364;DP=2579;DP4=1446,1066,16,0;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.92352e-06;MQSB=0.969418;RPB=0.228952;SGB=45.206;VDB=0.110651;EFF=INTERGENIC(MODIFIER||||||||||1) W279-4-1.SNP.9:16295801 chr09:016295801 0 W/16295801-16295801 W279-4-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g26820 exo70 exocyst complex subunit, putative, expressed SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN854-S.SNP.9:16306285 chr09:016306285 0 W/16306285-16306285 FN854-S Single Base Substitution T-A INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2630-S.SNP.9:16313343 chr09:016313343 0 W/16313343-16313343 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.936942;DP=4906;DP4=2406,2219,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000203832;MQB=1.20596e-11;MQSB=0.0557854;RPB=0.841571;SGB=72.7161;VDB=0.277996;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.9:16314430 chr09:016314430 0 W/16314430-16314430 FN547-S Single Base Substitution A-T INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3692-S.SNP.9:16315384 chr09:016315384 0 W/16315384-16315384 FN3692-S SNP T -> G AC=1;AN=190;BQB=0.886584;DP=2609;DP4=1096,1419,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13667e-08;MQSB=0.973093;RPB=0.678949;SGB=53.6492;VDB=0.870661;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.9:16320115 chr09:016320115 0 W/16320115-16320115 FN2612-S SNP C -> G AC=1;AN=198;BQB=0.991564;DP=3695;DP4=1582,1937,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.1817e-11;MQSB=0.93483;RPB=0.615005;SGB=81.7147;VDB=0.946496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Ggt|R92G|285|LOC_Os09g26850|protein_coding|CODING|LOC_Os09g26850.1|1|1) FN1405-S.SNP.9:16321832 chr09:016321832 0 W/16321832-16321832 FN1405-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN-381.SNP.9:16326084 chr09:016326084 0 W/16326084-16326084 FN-381 Single Base Substitution A-G UTR_5_PRIME HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3675-S.SNP.9:16331590 chr09:016331590 0 W/16331590-16331590 FN3675-S SNP C -> A AC=1;AN=190;BQB=0.345695;DP=2178;DP4=1136,960,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000459137;MQB=0.000781697;MQSB=0.916223;RPB=0.655429;SGB=21.8853;VDB=0.280204;EFF=INTRON(MODIFIER||||509|LOC_Os09g26880|protein_coding|CODING|LOC_Os09g26880.1|13|1),INTRON(MODIFIER||||386|LOC_Os09g26880|protein_coding|CODING|LOC_Os09g26880.3|13|1),INTRON(MODIFIER||||386|LOC_Os09g26880|protein_coding|CODING|LOC_Os09g26880.4|12|1) FN2492.SNP.9:16340052 chr09:016340052 0 W/16340052-16340052 FN2492 SNP G -> C AC=1;AN=200;BQB=0.945854;DP=4776;DP4=2348,2157,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54282e-11;MQSB=0.991394;RPB=0.785499;SGB=15.9106;VDB=0.925201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.9:16342011 chr09:016342011 0 W/16342011-16342011 FN1015-S Single Base Substitution A-G INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1657-S.SNP.9:16361268 chr09:016361268 0 W/16361268-16361268 FN1657-S Single Base Substitution C-A INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3287-S.SNP.9:16361710 chr09:016361710 0 W/16361710-16361710 FN3287-S SNP C -> A AC=1;AN=184;BQB=0.902132;DP=3244;DP4=1706,1444,18,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52666e-19;MQSB=0.969999;RPB=0.494378;SGB=134.656;VDB=0.778613;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L471|525|LOC_Os09g26940|protein_coding|CODING|LOC_Os09g26940.1|2|1) FN1401-S.SNP.9:16373493 chr09:016373493 0 W/16373493-16373493 FN1401-S Single Base Substitution G-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2788-S.SNP.9:16374105 chr09:016374105 0 W/16374105-16374105 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.997248;DP=4075;DP4=1985,1888,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0120245;MQB=0.0279985;MQSB=0.708537;RPB=0.552261;SGB=72.5245;VDB=0.418533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.9:16376155 chr09:016376155 0 W/16376155-16376155 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.944954;DP=4321;DP4=1879,2294,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0041657;MQB=0.00508641;MQSB=0.651582;RPB=0.942931;SGB=42.7914;VDB=0.648825;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.9:16377140 chr09:016377140 0 W/16377140-16377140 FN621-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2098-S.SNP.9:16384575 chr09:016384575 0 W/16384575-16384575 FN2098-S SNP C -> G AC=1;AN=168;BQB=0.00800461;DP=3424;DP4=2009,1355,23,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.24846e-11;MQSB=0.994404;RPB=0.854245;SGB=-209.742;VDB=0.561149;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.9:16391425 chr09:016391425 0 W/16391425-16391425 FN-144 Single Base Substitution T-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN943-S.SNP.9:16395109 chr09:016395109 0 W/16395109-16395109 FN943-S Single Base Substitution A-G INTRON HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN3947-S.SNP.9:16396294 chr09:016396294 0 W/16396294-16396294 FN3947-S SNP C -> A AC=1;AN=168;BQB=0.94473;DP=2937;DP4=1309,1499,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.0988e-12;MQSB=0.985149;RPB=0.307709;SGB=69.0561;VDB=0.205074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q462K|1933|LOC_Os09g26970|protein_coding|CODING|LOC_Os09g26970.1|2|1) FN3465-S.SNP.9:16399376 chr09:016399376 0 W/16399376-16399376 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.0556477;DP=2961;DP4=1525,1345,14,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40221e-07;MQSB=0.99338;RPB=0.445451;SGB=107.526;VDB=0.602721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P1286S|1933|LOC_Os09g26970|protein_coding|CODING|LOC_Os09g26970.1|5|1) FN2229-S.SNP.9:16400093 chr09:016400093 0 W/16400093-16400093 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.239393;DP=5104;DP4=2513,2299,16,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.14098e-17;MQSB=0.922343;RPB=0.883403;SGB=107.178;VDB=0.115843;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G1525S|1933|LOC_Os09g26970|protein_coding|CODING|LOC_Os09g26970.1|5|1) W252-6-1.SNP.9:16400389 chr09:016400389 0 W/16400389-16400389 W252-6-1 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN-371.SNP.9:16404109 chr09:016404109 0 W/16404109-16404109 FN-371 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g26980 cytochrome P450, putative, expressed SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN2106-S.SNP.9:16406932 chr09:016406932 0 W/16406932-16406932 FN2106-S SNP G -> A AC=1;AN=168;BQB=0.05578;DP=3674;DP4=1449,2182,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09218e-11;MQSB=0.995195;RPB=0.509828;SGB=-116.046;VDB=0.565979;EFF=INTRON(MODIFIER||||522|LOC_Os09g26980|protein_coding|CODING|LOC_Os09g26980.1|1|1) FN3804-S.SNP.9:16409803 chr09:016409803 0 W/16409803-16409803 FN3804-S SNP A -> G AC=1;AN=190;BQB=0.885565;DP=3001;DP4=1353,1532,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62316e-08;MQSB=0.931082;RPB=0.235498;SGB=18.552;VDB=0.130583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2153-S.SNP.9:16410731 chr09:016410731 0 W/16410731-16410731 FN2153-S SNP A -> T AC=1;AN=168;BQB=0.11147;DP=2045;DP4=955,1040,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000688038;MQSB=0.936116;RPB=0.82786;SGB=-55.5147;VDB=0.38995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.9:16414276 chr09:016414276 0 W/16414276-16414276 FN3834-S SNP G -> C AC=1;AN=190;BQB=0.943242;DP=2635;DP4=1236,1290,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01706e-06;MQSB=0.999721;RPB=0.775834;SGB=39.9877;VDB=0.372756;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgC|R90|426|LOC_Os09g26999|protein_coding|CODING|LOC_Os09g26999.1|4|1),UTR_3_PRIME(MODIFIER||159||75|LOC_Os09g26999|protein_coding|CODING|LOC_Os09g26999.2|4|1),UTR_3_PRIME(MODIFIER||1880||64|LOC_Os09g26999|protein_coding|CODING|LOC_Os09g26999.3|3|1) FN2403.SNP.9:16429170 chr09:016429170 0 W/16429170-16429170 FN2403 SNP A -> T AC=1;AN=200;BQB=0.769632;DP=4258;DP4=1831,2036,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.55182e-11;MQSB=0.993663;RPB=0.994977;SGB=29.4849;VDB=0.30061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.9:16440121 chr09:016440121 0 W/16440121-16440121 FN2399 SNP T -> C AC=2;AN=200;BQB=0.936265;DP=4839;DP4=2123,2386,8,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.05217e-18;MQSB=0.988499;RPB=0.613317;SGB=137.158;VDB=0.587525;EFF=INTRON(MODIFIER||||362|LOC_Os09g27030|protein_coding|CODING|LOC_Os09g27030.2|3|1) W42-1-3S-1.SNP.9:16441924 chr09:016441924 0 W/16441924-16441924 W42-1-3S-1 Single Base Substitution G-A INTRON HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN691-S.SNP.9:16447956 chr09:016447956 0 W/16447956-16447956 FN691-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN691-S.SNP.9:16447957 chr09:016447957 0 W/16447957-16447957 FN691-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN1409-S.SNP.9:16450303 chr09:016450303 0 W/16450303-16450303 FN1409-S Single Base Substitution A-G INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2440.SNP.9:16451398 chr09:016451398 0 W/16451398-16451398 FN2440 SNP C -> T AC=1;AN=200;BQB=0.978356;DP=5364;DP4=2636,2429,21,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.31381e-18;MQSB=0.367829;RPB=0.87721;SGB=36.7778;VDB=0.228556;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.9:16451659 chr09:016451659 0 W/16451659-16451659 FN416-S Single Base Substitution C-T INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN527-S.SNP.9:16466586 chr09:016466586 0 W/16466586-16466586 FN527-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g27060 SNF2 family N-terminal domain containing protein, expressed SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1192-S.SNP.9:16467817 chr09:016467817 0 W/16467817-16467817 FN1192-S Single Base Substitution C-T INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1402-S.SNP.9:16481139 chr09:016481139 0 W/16481139-16481139 FN1402-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1424-S.SNP.9:16485323 chr09:016485323 0 W/16485323-16485323 FN1424-S Single Base Substitution G-A INTRON HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN2735-S.SNP.9:16501564 chr09:016501564 0 W/16501564-16501564 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.949993;DP=4521;DP4=2216,2107,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.67681e-10;MQSB=0.924379;RPB=0.827659;SGB=86.5007;VDB=0.722787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R8Q|385|LOC_Os09g27135|protein_coding|CODING|LOC_Os09g27135.1|1|1) FN1506-S.SNP.9:16508344 chr09:016508344 0 W/16508344-16508344 FN1506-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN812-S.SNP.9:16512749 chr09:016512749 0 W/16512749-16512749 FN812-S Single Base Substitution G-A INTERGENIC HOMO SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN-103.SNP.9:16512845 chr09:016512845 0 W/16512845-16512845 FN-103 Single Base Substitution G-T INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN527-S.SNP.9:16512845 chr09:016512845 0 W/16512845-16512845 FN527-S Single Base Substitution G-T INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3822-S.SNP.9:16515567 chr09:016515567 0 W/16515567-16515567 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.959785;DP=3164;DP4=1605,1454,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.97668e-08;MQSB=0.825176;RPB=0.994868;SGB=39.6545;VDB=0.406196;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.9:16533606 chr09:016533606 0 W/16533606-16533606 FN815-S Single Base Substitution C-A INTRON HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3650-S.SNP.9:16533613 chr09:016533613 0 W/16533613-16533613 FN3650-S SNP G -> T AC=1;AN=190;BQB=0.843078;DP=3165;DP4=1501,1467,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000122028;MQSB=0.983849;RPB=0.942937;SGB=39.9877;VDB=0.193383;EFF=INTRON(MODIFIER||||339|LOC_Os09g27190|protein_coding|CODING|LOC_Os09g27190.1|3|1) FN1485-S.SNP.9:16536125 chr09:016536125 0 W/16536125-16536125 FN1485-S Single Base Substitution T-C INTRON Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN4344-S.SNP.9:16537384 chr09:016537384 0 W/16537384-16537384 FN4344-S SNP C -> T AC=1;AN=170;BQB=0.998583;DP=2491;DP4=1139,1295,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000401445;MQB=3.88559e-06;MQSB=0.998521;RPB=0.997515;SGB=34.5445;VDB=0.145385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1661-S.SNP.9:16540403 chr09:016540403 0 W/16540403-16540403 FN1661-S Single Base Substitution C-T INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN-100.SNP.9:16548385 chr09:016548385 0 W/16548385-16548385 FN-100 Single Base Substitution A-G INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN3311-S.SNP.9:16551172 chr09:016551172 0 W/16551172-16551172 FN3311-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN2498.SNP.9:16551719 chr09:016551719 0 W/16551719-16551719 FN2498 SNP A -> T AC=1;AN=200;BQB=0.988563;DP=3600;DP4=1212,1877,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64629e-08;MQSB=0.88509;RPB=0.982966;SGB=47.4799;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.9:16554697 chr09:016554697 0 W/16554697-16554697 FN2109-S SNP C -> T AC=1;AN=168;BQB=0.703642;DP=3781;DP4=1765,1950,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.79797e-11;MQSB=0.967162;RPB=0.986985;SGB=17.068;VDB=0.451483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T217I|244|LOC_Os09g27220|protein_coding|CODING|LOC_Os09g27220.1|3|1) FN2739-S.SNP.9:16562549 chr09:016562549 0 W/16562549-16562549 FN2739-S SNP C -> G AC=1;AN=200;BQB=0.993253;DP=4966;DP4=2803,1896,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03829e-12;MQSB=0.969559;RPB=0.894886;SGB=39.9056;VDB=0.947369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.9:16563596 chr09:016563596 0 W/16563596-16563596 FN2130-S SNP T -> C AC=1;AN=168;BQB=0.292837;DP=3931;DP4=1877,2028,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.20194e-05;MQSB=0.969226;RPB=0.911577;SGB=2.75988;VDB=0.918109;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.9:16564177 chr09:016564177 0 W/16564177-16564177 FN975-S Single Base Substitution A-C INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN2190-S.SNP.9:16565471 chr09:016565471 0 W/16565471-16565471 FN2190-S SNP G -> C AC=1;AN=190;BQB=0.926968;DP=3878;DP4=1708,1830,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000257865;MQB=3.27155e-07;MQSB=0.110815;RPB=0.798515;SGB=62.7569;VDB=0.251061;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtG|V178|315|LOC_Os09g27250|protein_coding|CODING|LOC_Os09g27250.1|1|1) FN-201.SNP.9:16568141 chr09:016568141 0 W/16568141-16568141 FN-201 Single Base Substitution A-C INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN1615-S.SNP.9:16584268 chr09:016584268 0 W/16584268-16584268 FN1615-S Single Base Substitution A-T INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN-101.SNP.9:16592052 chr09:016592052 0 W/16592052-16592052 FN-101 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g27290 retrotransposon protein, putative, unclassified, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN4093-S.SNP.9:16596232 chr09:016596232 0 W/16596232-16596232 FN4093-S SNP G -> A AC=2;AN=182;BQB=0.938612;DP=2910;DP4=1396,1439,11,12;HOB=0.0217365;ICB=0.494567;MQ=43;MQ0F=0.0134021;MQB=0.00156029;MQSB=0.794634;RPB=0.899769;SGB=98.2417;VDB=0.721272;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D2067|2267|LOC_Os09g27300|protein_coding|CODING|LOC_Os09g27300.1|5|1) FN-396.SNP.9:16596348 chr09:016596348 0 W/16596348-16596348 FN-396 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g27300 retrotransposon protein, putative, unclassified, expressed SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN1395-S.SNP.9:16599946 chr09:016599946 0 W/16599946-16599946 FN1395-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g27300 retrotransposon protein, putative, unclassified, expressed SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. W423-5-1.SNP.9:16600390 chr09:016600390 0 W/16600390-16600390 W423-5-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g27300 retrotransposon protein, putative, unclassified, expressed SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN4241-S.SNP.9:16601338 chr09:016601338 0 W/16601338-16601338 FN4241-S SNP G -> A AC=2;AN=170;BQB=0.271138;DP=2460;DP4=1295,1088,18,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.48873e-14;MQSB=0.646185;RPB=0.849831;SGB=145.61;VDB=0.469134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R500W|2267|LOC_Os09g27300|protein_coding|CODING|LOC_Os09g27300.1|2|1) FN3823-S.SNP.9:16605052 chr09:016605052 0 W/16605052-16605052 FN3823-S SNP C -> T AC=2;AN=190;BQB=0.71535;DP=2811;DP4=1374,1351,7,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00675916;MQB=4.23763e-07;MQSB=0.318942;RPB=0.967424;SGB=90.0802;VDB=0.868557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D223N|495|LOC_Os09g27310|protein_coding|CODING|LOC_Os09g27310.1|2|1) FN3667-S.SNP.9:16609127 chr09:016609127 0 W/16609127-16609127 FN3667-S SNP C -> A AC=2;AN=190;BQB=0.702435;DP=3080;DP4=1420,1539,8,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.25136e-12;MQSB=0.973119;RPB=0.919512;SGB=44.0907;VDB=0.372795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3630-S.SNP.9:16613529 chr09:016613529 0 W/16613529-16613529 FN3630-S SNP A -> G AC=2;AN=190;BQB=0.998228;DP=1728;DP4=287,1361,8,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.59204e-11;MQSB=0.0469304;RPB=0.492433;SGB=85.5263;VDB=0.413797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2301.SNP.9:16622778 chr09:016622778 0 W/16622778-16622778 FN2301 SNP C -> T AC=1;AN=192;BQB=0.565205;DP=4262;DP4=1931,1969,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.1863e-05;MQSB=0.0775498;RPB=0.179951;SGB=40.0819;VDB=0.649936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S256F|656|LOC_Os09g27340|protein_coding|CODING|LOC_Os09g27340.1|1|1) FN428-S.SNP.9:16627322 chr09:016627322 0 W/16627322-16627322 FN428-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2650-S.SNP.9:16627526 chr09:016627526 0 W/16627526-16627526 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.904222;DP=4741;DP4=2405,2046,19,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78663e-17;MQSB=0.89728;RPB=0.504215;SGB=-5.84819;VDB=0.15744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M713I|1014|LOC_Os09g27350|protein_coding|CODING|LOC_Os09g27350.1|2|1) FN629-S.SNP.9:16629752 chr09:016629752 0 W/16629752-16629752 FN629-S Single Base Substitution G-A INTERGENIC HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN4311-S.SNP.9:16639642 chr09:016639642 0 W/16639642-16639642 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.944697;DP=2638;DP4=1119,1428,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.66683e-05;MQSB=0.980564;RPB=0.99281;SGB=34.5445;VDB=0.974994;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.9:16642615 chr09:016642615 0 W/16642615-16642615 FN3577-S SNP C -> T AC=1;AN=188;BQB=0.985029;DP=3567;DP4=1548,1786,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.35969e-12;MQSB=0.981283;RPB=0.999689;SGB=74.9605;VDB=0.0375362;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.9:16642829 chr09:016642829 0 W/16642829-16642829 W470-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN4080-S.SNP.9:16643272 chr09:016643272 0 W/16643272-16643272 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.981288;DP=3362;DP4=1620,1675,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.01146e-07;MQSB=0.986475;RPB=0.962788;SGB=53.1331;VDB=0.518915;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-S.SNP.9:16644784 chr09:016644784 0 W/16644784-16644784 FN1156-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g27390 transposon protein, putative, unclassified, expressed SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1668-S.SNP.9:16648204 chr09:016648204 0 W/16648204-16648204 FN1668-S SNP C -> T AC=1;AN=188;BQB=0.965271;DP=2854;DP4=799,2027,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.74156e-06;MQSB=0.312208;RPB=0.817571;SGB=0.908326;VDB=0.354017;EFF=INTERGENIC(MODIFIER||||||||||1) FN-100.SNP.9:16649712 chr09:016649712 0 W/16649712-16649712 FN-100 Single Base Substitution T-G INTRON HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN629-S.SNP.9:16655283 chr09:016655283 0 W/16655283-16655283 FN629-S Single Base Substitution T-C INTRON HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3665-S.SNP.9:16661422 chr09:016661422 0 W/16661422-16661422 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.433139;DP=2567;DP4=1204,1268,20,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18157e-15;MQSB=0.990311;RPB=0.0763749;SGB=36.7425;VDB=0.912358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S2F|59|LOC_Os09g27440|protein_coding|CODING|LOC_Os09g27440.1|1|1) FN1287-S.SNP.9:16664748 chr09:016664748 0 W/16664748-16664748 FN1287-S Single Base Substitution T-C INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2136-S.SNP.9:16670791 chr09:016670791 0 W/16670791-16670791 FN2136-S SNP A -> G AC=1;AN=168;BQB=0.0598032;DP=4130;DP4=1963,2125,19,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28686e-13;MQSB=0.579569;RPB=0.385234;SGB=-158.61;VDB=0.525477;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.9:16671969 chr09:016671969 0 W/16671969-16671969 FN1751-S SNP C -> A AC=2;AN=188;BQB=0.290845;DP=3654;DP4=2310,1281,30,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.07456e-19;MQSB=0.977127;RPB=0.146944;SGB=-214.68;VDB=0.495814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.9:16673813 chr09:016673813 0 W/16673813-16673813 FN2102-S SNP T -> C AC=2;AN=168;BQB=0.537469;DP=4243;DP4=1821,2320,15,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.83216e-17;MQSB=0.641006;RPB=0.408938;SGB=-149.446;VDB=0.636962;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.9:16678677 chr09:016678677 0 W/16678677-16678677 FN4172-S SNP A -> T AC=2;AN=170;BQB=0.959535;DP=2392;DP4=1214,1096,14,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.05205e-14;MQSB=0.921402;RPB=0.354641;SGB=110.069;VDB=0.59;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.9:16679211 chr09:016679211 0 W/16679211-16679211 FN2375 SNP T -> A AC=2;AN=192;BQB=0.29534;DP=5297;DP4=2505,2549,13,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.75687e-15;MQSB=0.649286;RPB=0.999966;SGB=149.626;VDB=0.619203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.9:16685886 chr09:016685886 0 W/16685886-16685886 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.709925;DP=4852;DP4=2339,2238,7,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53373e-18;MQSB=0.985413;RPB=0.960047;SGB=94.3471;VDB=0.750953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.9:16686421 chr09:016686421 0 W/16686421-16686421 FN3804-S SNP T -> A AC=2;AN=190;BQB=0.854782;DP=2580;DP4=1108,1370,13,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.11419e-12;MQSB=0.991406;RPB=0.845886;SGB=38.983;VDB=0.932566;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.9:16686428 chr09:016686428 0 W/16686428-16686428 FN3804-S SNP G -> C AC=2;AN=190;BQB=0.917903;DP=2562;DP4=1091,1385,10,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63322e-11;MQSB=0.995367;RPB=0.440677;SGB=76.4186;VDB=0.850356;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.9:16689992 chr09:016689992 0 W/16689992-16689992 FN4039-S SNP G -> T AC=1;AN=168;BQB=0.65412;DP=2509;DP4=1290,1094,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44243e-07;MQSB=0.650897;RPB=0.833689;SGB=38.1788;VDB=0.367377;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.9:16693233 chr09:016693233 0 W/16693233-16693233 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. W596-1-1.SNP.9:16695040 chr09:016695040 0 W/16695040-16695040 W596-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN-228.SNP.9:16695657 chr09:016695657 0 W/16695657-16695657 FN-228 Single Base Substitution A-G INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN3695-S.SNP.9:16696732 chr09:016696732 0 W/16696732-16696732 FN3695-S SNP T -> A AC=2;AN=190;BQB=0.818971;DP=2971;DP4=1393,1379,10,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.27319e-11;MQSB=0.250998;RPB=0.282683;SGB=56.8601;VDB=0.447099;EFF=UTR_3_PRIME(MODIFIER||92||113|LOC_Os09g27480|protein_coding|CODING|LOC_Os09g27480.1|1|1) FN3938-S.SNP.9:16699474 chr09:016699474 0 W/16699474-16699474 FN3938-S SNP A -> G AC=1;AN=158;BQB=0.984206;DP=2364;DP4=1175,1077,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.78819e-07;MQSB=0.99861;RPB=0.921044;SGB=14.3409;VDB=0.391706;EFF=INTERGENIC(MODIFIER||||||||||1) FN691-S.SNP.9:16700431 chr09:016700431 0 W/16700431-16700431 FN691-S Single Base Substitution T-A INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN4135-S.SNP.9:16702195 chr09:016702195 0 W/16702195-16702195 FN4135-S SNP A -> T AC=1;AN=182;BQB=0.540713;DP=2943;DP4=1425,1361,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.9491e-05;MQSB=0.988622;RPB=0.939499;SGB=20.6332;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.9:16712149 chr09:016712149 0 W/16712149-16712149 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.705381;DP=3754;DP4=1956,1564,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.37657e-07;MQSB=0.675383;RPB=0.459505;SGB=29.3637;VDB=0.667077;EFF=INTRON(MODIFIER||||510|LOC_Os09g27500|protein_coding|CODING|LOC_Os09g27500.1|1|1) FN1152-S.SNP.9:16716744 chr09:016716744 0 W/16716744-16716744 FN1152-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2447.SNP.9:16719953 chr09:016719953 0 W/16719953-16719953 FN2447 SNP T -> C AC=1;AN=200;BQB=0.996199;DP=4211;DP4=1926,1959,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.22495e-05;MQSB=0.815625;RPB=0.992906;SGB=35.8441;VDB=0.443438;EFF=INTRON(MODIFIER||||505|LOC_Os09g27510|protein_coding|CODING|LOC_Os09g27510.1|1|1) FN3296-S.SNP.9:16724636 chr09:016724636 0 W/16724636-16724636 FN3296-S SNP T -> A AC=2;AN=184;BQB=0.912923;DP=2614;DP4=1346,1181,6,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.16956e-06;MQSB=0.986717;RPB=0.356591;SGB=35.1773;VDB=0.298589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.9:16739435 chr09:016739435 0 W/16739435-16739435 FN2380 SNP C -> T AC=1;AN=192;BQB=0.909426;DP=3265;DP4=1501,1409,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00153139;MQB=0.0131115;MQSB=0.201222;RPB=0.972006;SGB=18.6565;VDB=0.436745;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.9:16742041 chr09:016742041 0 W/16742041-16742041 FN1219-S Single Base Substitution A-C INTRON HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2351.SNP.9:16743244 chr09:016743244 0 W/16743244-16743244 FN2351 SNP G -> A AC=1;AN=192;BQB=0.990621;DP=4619;DP4=2261,2140,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.02979e-07;MQSB=0.000169603;RPB=0.822807;SGB=46.9087;VDB=0.257102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H88Y|414|LOC_Os09g27550|protein_coding|CODING|LOC_Os09g27550.1|1|1) FN3676-S.SNP.9:16753975 chr09:016753975 0 W/16753975-16753975 FN3676-S SNP C -> G AC=1;AN=190;BQB=0.922383;DP=2112;DP4=1286,762,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.8975e-05;MQSB=0.601451;RPB=0.0535937;SGB=14.7784;VDB=0.154146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.9:16754552 chr09:016754552 0 W/16754552-16754552 FN2113-S SNP T -> G AC=1;AN=168;BQB=0.043424;DP=2163;DP4=982,1076,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000380565;MQSB=0.998439;RPB=0.733483;SGB=-136.635;VDB=0.329317;EFF=UTR_5_PRIME(MODIFIER||334||707|LOC_Os09g27580|protein_coding|CODING|LOC_Os09g27580.2|1|1) FN858-S.SNP.9:16757713 chr09:016757713 0 W/16757713-16757713 FN858-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g27580 potassium transporter, putative, expressed SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN1741-S.SNP.9:16761418 chr09:016761418 0 W/16761418-16761418 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.281362;DP=3916;DP4=1741,2134,11,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.88736e-10;MQSB=0.992661;RPB=0.771805;SGB=-75.0128;VDB=0.935053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.9:16762492 chr09:016762492 0 W/16762492-16762492 FN1731-S SNP A -> G AC=2;AN=188;BQB=0.024845;DP=3472;DP4=1704,1720,18,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.24396e-11;MQSB=0.980557;RPB=0.675496;SGB=-206.824;VDB=0.763635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.9:16770228 chr09:016770228 0 W/16770228-16770228 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.23351;DP=4916;DP4=2279,2343,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88226e-07;MQSB=0.81477;RPB=0.282258;SGB=4.11112;VDB=0.642606;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.9:16771863 chr09:016771863 0 W/16771863-16771863 FN_949-1 Single Base Substitution C-A Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN_949-1.SNP.9:16771864 chr09:016771864 0 W/16771864-16771864 FN_949-1 Single Base Substitution A-T Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1600-S.SNP.9:16772153 chr09:016772153 0 W/16772153-16772153 FN1600-S Single Base Substitution G-T INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3851-S.SNP.9:16781779 chr09:016781779 0 W/16781779-16781779 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.8159;DP=2607;DP4=1259,1253,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36694e-07;MQSB=0.872147;RPB=0.871518;SGB=34.0735;VDB=0.981994;EFF=INTRON(MODIFIER||||387|LOC_Os09g27610|protein_coding|CODING|LOC_Os09g27610.1|2|1) FN3851-S.SNP.9:16781790 chr09:016781790 0 W/16781790-16781790 FN3851-S SNP T -> A AC=1;AN=158;BQB=0.501041;DP=2613;DP4=1259,1276,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.28817e-07;MQSB=0.783682;RPB=0.73373;SGB=34.0735;VDB=0.969062;EFF=INTRON(MODIFIER||||387|LOC_Os09g27610|protein_coding|CODING|LOC_Os09g27610.1|2|1) FN2734-S.SNP.9:16784631 chr09:016784631 0 W/16784631-16784631 FN2734-S SNP T -> G AC=1;AN=200;BQB=0.924328;DP=5099;DP4=2442,2472,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196117;MQB=2.05764e-15;MQSB=0.965526;RPB=0.287272;SGB=63.3521;VDB=0.955777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.9:16784844 chr09:016784844 0 W/16784844-16784844 FN2137-S SNP A -> G AC=1;AN=168;BQB=0.947928;DP=3461;DP4=1724,1687,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.30146e-12;MQSB=0.999819;RPB=0.851229;SGB=-11.926;VDB=0.89936;EFF=INTERGENIC(MODIFIER||||||||||1) FN-178.SNP.9:16785531 chr09:016785531 0 W/16785531-16785531 FN-178 Single Base Substitution G-C INTERGENIC HOMO SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN4114-S.SNP.9:16788919 chr09:016788919 0 W/16788919-16788919 FN4114-S SNP A -> G AC=1;AN=182;BQB=0.974733;DP=3039;DP4=1515,1447,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.75352e-10;MQSB=0.880241;RPB=0.991787;SGB=66.6657;VDB=0.972614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.9:16794475 chr09:016794475 0 W/16794475-16794475 FN2423 SNP C -> A AC=1;AN=200;BQB=0.109131;DP=4297;DP4=2131,1887,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51702e-06;MQSB=1.14106e-05;RPB=0.921353;SGB=-35.7104;VDB=0.180703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:16815947 chr09:016815947 0 W/16815947-16815947 FN1097-S Single Base Substitution A-C INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN-189.SNP.9:16816762 chr09:016816762 0 W/16816762-16816762 FN-189 Single Base Substitution A-T INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3471-S.SNP.9:16823806 chr09:016823806 0 W/16823806-16823806 FN3471-S SNP G -> A AC=2;AN=184;BQB=0.999963;DP=3720;DP4=1348,2210,14,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.67953e-19;MQSB=0.994333;RPB=0.921098;SGB=161.787;VDB=0.490135;EFF=INTRON(MODIFIER||||422|LOC_Os09g27650|protein_coding|CODING|LOC_Os09g27650.1|1|1),INTRON(MODIFIER||||504|LOC_Os09g27650|protein_coding|CODING|LOC_Os09g27650.2|2|1) FN2687-S.SNP.9:16824334 chr09:016824334 0 W/16824334-16824334 FN2687-S SNP G -> T AC=2;AN=200;BQB=0.980835;DP=5157;DP4=2477,2349,18,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.03927e-18;MQSB=0.874522;RPB=0.962789;SGB=127.947;VDB=0.669221;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P197|422|LOC_Os09g27650|protein_coding|CODING|LOC_Os09g27650.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P279|504|LOC_Os09g27650|protein_coding|CODING|LOC_Os09g27650.2|3|1) FN446-S.SNP.9:16833666 chr09:016833666 0 W/16833666-16833666 FN446-S Single Base Substitution T-C INTRON HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN3396-S.SNP.9:16837624 chr09:016837624 0 W/16837624-16837624 FN3396-S SNP G -> A AC=2;AN=184;BQB=0.795155;DP=2448;DP4=1053,1299,13,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.88553e-13;MQSB=0.933238;RPB=0.952778;SGB=112.047;VDB=0.475019;EFF=INTRON(MODIFIER||||863|LOC_Os09g27660|protein_coding|CODING|LOC_Os09g27660.1|8|1),INTRON(MODIFIER||||461|LOC_Os09g27660|protein_coding|CODING|LOC_Os09g27660.9|8|1) FN1079-S.SNP.9:16839150 chr09:016839150 0 W/16839150-16839150 FN1079-S Single Base Substitution C-T INTERGENIC HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN2125-S.SNP.9:16840118 chr09:016840118 0 W/16840118-16840118 FN2125-S SNP C -> A AC=2;AN=168;BQB=0.947263;DP=2887;DP4=1302,1529,10,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.49325e-16;MQSB=0.899526;RPB=0.571079;SGB=58.647;VDB=0.892579;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.9:16842752 chr09:016842752 0 W/16842752-16842752 FN-273 Single Base Substitution G-A INTERGENIC HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3280-S.SNP.9:16847344 chr09:016847344 0 W/16847344-16847344 FN3280-S SNP C -> A AC=1;AN=184;BQB=0.971226;DP=3445;DP4=1546,1815,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.52994e-10;MQSB=0.861953;RPB=0.851858;SGB=56.8786;VDB=0.430827;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R255|342|LOC_Os09g27670|protein_coding|CODING|LOC_Os09g27670.1|2|1) FN3280-S.SNP.9:16847345 chr09:016847345 0 W/16847345-16847345 FN3280-S SNP G -> T AC=1;AN=184;BQB=0.99964;DP=3433;DP4=1534,1790,6,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.33413e-11;MQSB=0.797076;RPB=0.961667;SGB=75.8731;VDB=0.436022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A256S|342|LOC_Os09g27670|protein_coding|CODING|LOC_Os09g27670.1|2|1) FN753-S.SNP.9:16847497 chr09:016847497 0 W/16847497-16847497 FN753-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN4126-S.SNP.9:16850126 chr09:016850126 0 W/16850126-16850126 FN4126-S SNP A -> G AC=1;AN=182;BQB=0.941902;DP=3355;DP4=1496,1745,3,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.60241e-07;MQSB=0.970727;RPB=0.849022;SGB=57.644;VDB=0.347065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.9:16852485 chr09:016852485 0 W/16852485-16852485 FN1221-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g27690 expressed protein SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN4064-S.SNP.9:16853116 chr09:016853116 0 W/16853116-16853116 FN4064-S SNP C -> A AC=1;AN=168;BQB=0.289864;DP=2942;DP4=1047,1784,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000125354;MQSB=0.998241;RPB=0.826536;SGB=14.8923;VDB=0.691426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H227N|266|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H198N|237|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H198N|237|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H198N|219|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.4|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H198N|237|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.5|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H108N|147|LOC_Os09g27690|protein_coding|CODING|LOC_Os09g27690.6|2|1) FN3562-S.SNP.9:16861204 chr09:016861204 0 W/16861204-16861204 FN3562-S SNP C -> T AC=2;AN=188;BQB=0.610387;DP=2773;DP4=1332,1359,15,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.22589e-18;MQSB=0.949666;RPB=0.90839;SGB=148.931;VDB=0.32507;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.9:16863774 chr09:016863774 0 W/16863774-16863774 FN519-S Single Base Substitution C-T INTERGENIC HOMO SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN2138-S.SNP.9:16873445 chr09:016873445 0 W/16873445-16873445 FN2138-S SNP T -> A AC=1;AN=168;BQB=0.532721;DP=2644;DP4=2071,509,16,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.87553e-05;MQSB=0.54082;RPB=0.952476;SGB=-85.2162;VDB=0.110041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.9:16873445 chr09:016873445 0 W/16873445-16873445 FN2484 SNP T -> A AC=1;AN=200;BQB=0.989749;DP=5355;DP4=2647,2101,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06431e-10;MQSB=0.000421465;RPB=0.103272;SGB=-10.0844;VDB=0.855165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.9:16873446 chr09:016873446 0 W/16873446-16873446 FN3944-S SNP A -> T AC=2;AN=168;BQB=0.976155;DP=2955;DP4=1556,1251,15,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000676819;MQB=2.27748e-09;MQSB=0.716387;RPB=0.983356;SGB=87.6193;VDB=0.689033;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.9:16873446 chr09:016873446 0 W/16873446-16873446 FN670-S Single Base Substitution A-T INTERGENIC HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2562-S.SNP.9:16875754 chr09:016875754 0 W/16875754-16875754 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.997222;DP=4122;DP4=2134,1778,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.68169e-15;MQSB=0.918103;RPB=0.927922;SGB=83.2905;VDB=0.315472;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A42|98|LOC_Os09g27730|protein_coding|CODING|LOC_Os09g27730.1|2|1) FN3839-S.SNP.9:16878236 chr09:016878236 0 W/16878236-16878236 FN3839-S SNP C -> G AC=1;AN=190;BQB=0.955908;DP=2135;DP4=855,1183,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.22508e-06;MQSB=0.582048;RPB=0.314075;SGB=58.2031;VDB=0.591114;EFF=UTR_3_PRIME(MODIFIER||1696||88|LOC_Os09g27734|protein_coding|CODING|LOC_Os09g27734.1|3|1) FN3723-S.SNP.9:16879348 chr09:016879348 0 W/16879348-16879348 FN3723-S SNP T -> C AC=1;AN=190;BQB=0.885743;DP=2603;DP4=1550,935,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=22;MQ0F=0.349981;MQB=0.878532;MQSB=0;RPB=0.689493;SGB=62.7569;VDB=0.957255;EFF=UTR_3_PRIME(MODIFIER||584||88|LOC_Os09g27734|protein_coding|CODING|LOC_Os09g27734.1|3|1) FN2089-S.SNP.9:16880780 chr09:016880780 0 W/16880780-16880780 FN2089-S SNP C -> G AC=2;AN=168;BQB=0.180136;DP=2863;DP4=1605,1193,17,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.49217e-12;MQSB=0.992906;RPB=0.91112;SGB=27.0838;VDB=0.364988;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.9:16883188 chr09:016883188 0 W/16883188-16883188 FN-231 Single Base Substitution T-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2147-S.SNP.9:16884242 chr09:016884242 0 W/16884242-16884242 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.846145;DP=2856;DP4=1256,1541,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.22898e-07;MQSB=0.999671;RPB=0.526248;SGB=34.748;VDB=0.632065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.9:16884463 chr09:016884463 0 W/16884463-16884463 FN3911-S SNP G -> A AC=1;AN=158;BQB=0.968967;DP=2724;DP4=1489,1077,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000318431;MQSB=0.99854;RPB=0.214091;SGB=17.2267;VDB=0.226103;EFF=UTR_3_PRIME(MODIFIER||823||74|LOC_Os09g27744|protein_coding|CODING|LOC_Os09g27744.1|2|1) FN-310.SNP.9:16884934 chr09:016884934 0 W/16884934-16884934 FN-310 Single Base Substitution T-C INTRON HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1492-S.SNP.9:16885720 chr09:016885720 0 W/16885720-16885720 FN1492-S Single Base Substitution G-A INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. W23-2-1.SNP.9:16889573 chr09:016889573 0 W/16889573-16889573 W23-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN808-S.SNP.9:16900544 chr09:016900544 0 W/16900544-16900544 FN808-S Single Base Substitution C-T INTRON HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN-353.SNP.9:16903789 chr09:016903789 0 W/16903789-16903789 FN-353 Single Base Substitution C-G INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN-127.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN-127 Single Base Substitution A-T INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-241.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN-241 Single Base Substitution A-T INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN1419-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN1419-S Single Base Substitution A-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1681-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN1681-S SNP A -> T AC=2;AN=188;BQB=0.84051;DP=2230;DP4=1159,998,11,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.16134e-07;MQSB=0.996112;RPB=0.786712;SGB=26.0762;VDB=0.749428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN2175-S SNP A -> T AC=2;AN=168;BQB=0.101002;DP=2569;DP4=1279,1208,9,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.73361e-09;MQSB=0.999667;RPB=0.712031;SGB=11.3448;VDB=0.442082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN2226-S SNP A -> T AC=2;AN=190;BQB=0.809893;DP=3717;DP4=1536,1684,20,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.13973e-17;MQSB=0.894124;RPB=0.877426;SGB=84.9528;VDB=0.280517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN2340 SNP A -> T AC=2;AN=192;BQB=0.305886;DP=4567;DP4=1912,2148,5,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000437924;MQB=1.60992e-11;MQSB=0.913356;RPB=0.946858;SGB=44.3;VDB=0.192547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN3444-S SNP A -> T AC=2;AN=184;BQB=0.730176;DP=3041;DP4=1251,1575,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.22064e-13;MQSB=0.998261;RPB=0.978781;SGB=-111.48;VDB=0.474592;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN3976-S SNP A -> T AC=2;AN=168;BQB=0.858024;DP=2471;DP4=952,1285,15,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.12821e-15;MQSB=0.766578;RPB=0.532333;SGB=19.9297;VDB=0.645973;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN440-S Single Base Substitution A-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN824-S.SNP.9:16905094 chr09:016905094 0 W/16905094-16905094 FN824-S Single Base Substitution A-T INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3347-S.SNP.9:16907126 chr09:016907126 0 W/16907126-16907126 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.0297934;DP=2779;DP4=1340,1313,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87917e-05;MQSB=0.975799;RPB=0.191889;SGB=11.3677;VDB=0.687942;EFF=INTERGENIC(MODIFIER||||||||||1) FN1713-S.SNP.9:16915288 chr09:016915288 0 W/16915288-16915288 FN1713-S SNP G -> C AC=1;AN=188;BQB=0.126341;DP=2288;DP4=1061,1180,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0034965;MQB=0.694939;MQSB=0.362715;RPB=0.564952;SGB=-36.4511;VDB=0.462928;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gCg|G80A|727|LOC_Os09g27800|protein_coding|CODING|LOC_Os09g27800.1|3|1) FN3358-S.SNP.9:16918809 chr09:016918809 0 W/16918809-16918809 FN3358-S SNP G -> A AC=1;AN=184;BQB=0.464719;DP=3428;DP4=1625,1713,11,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.03176e-10;MQSB=0.512097;RPB=0.92318;SGB=74.4875;VDB=0.284444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.9:16922129 chr09:016922129 0 W/16922129-16922129 FN3513-S SNP G -> A AC=1;AN=188;BQB=0.961732;DP=3490;DP4=1587,1843,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.18778e-08;MQSB=0.732278;RPB=0.277312;SGB=48.979;VDB=0.210773;EFF=INTRON(MODIFIER||||819|LOC_Os09g27810|protein_coding|CODING|LOC_Os09g27810.1|2|1) FN3852-S.SNP.9:16923834 chr09:016923834 0 W/16923834-16923834 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.993716;DP=2475;DP4=1297,1095,5,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.94663e-08;MQSB=0.981611;RPB=0.8921;SGB=55.806;VDB=0.351645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.9:16924137 chr09:016924137 0 W/16924137-16924137 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.743427;DP=4810;DP4=2134,2449,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.52696e-11;MQSB=0.929516;RPB=0.114403;SGB=86.3098;VDB=0.0766354;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.9:16927529 chr09:016927529 0 W/16927529-16927529 FN4272-S SNP T -> C AC=1;AN=170;BQB=0.64075;DP=2828;DP4=1083,1607,17,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.93018e-15;MQSB=0.997663;RPB=0.957885;SGB=100.288;VDB=0.492;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.9:16937787 chr09:016937787 0 W/16937787-16937787 FN-387 Single Base Substitution G-A INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1133-S.SNP.9:16952588 chr09:016952588 0 W/16952588-16952588 FN1133-S Single Base Substitution A-G INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN949-S.SNP.9:16955399 chr09:016955399 0 W/16955399-16955399 FN949-S Single Base Substitution C-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN3359-S.SNP.9:16955492 chr09:016955492 0 W/16955492-16955492 FN3359-S SNP G -> A AC=1;AN=184;BQB=0.991098;DP=2826;DP4=1312,1448,4,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.22908e-09;MQSB=0.990665;RPB=0.995837;SGB=66.8296;VDB=0.728828;EFF=INTERGENIC(MODIFIER||||||||||1) FN-39.SNP.9:16964019 chr09:016964019 0 W/16964019-16964019 FN-39 Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os09g27900 plastidic glucose transporter 1, putative, expressed SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN2676-S.SNP.9:16970460 chr09:016970460 0 W/16970460-16970460 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.966329;DP=4746;DP4=2056,2425,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.50815e-07;MQSB=0.975782;RPB=0.923978;SGB=49.6594;VDB=0.721559;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L67|441|LOC_Os09g27910|protein_coding|CODING|LOC_Os09g27910.1|1|1) FN-329.SNP.9:16972461 chr09:016972461 0 W/16972461-16972461 FN-329 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g27920 expressed protein SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3761-S.SNP.9:16982365 chr09:016982365 0 W/16982365-16982365 FN3761-S SNP T -> C AC=1;AN=190;BQB=0.996163;DP=2750;DP4=1399,1281,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.62572e-07;MQSB=0.999939;RPB=0.0607327;SGB=44.5415;VDB=0.130593;EFF=INTRON(MODIFIER||||393|LOC_Os09g27950|protein_coding|CODING|LOC_Os09g27950.1|4|1) FN3885-S.SNP.9:16986618 chr09:016986618 0 W/16986618-16986618 FN3885-S SNP A -> G AC=2;AN=158;BQB=0.996243;DP=2304;DP4=872,1251,10,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.20317e-12;MQSB=0.99238;RPB=0.767288;SGB=45.1437;VDB=0.534513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.9:16990758 chr09:016990758 0 W/16990758-16990758 FN1615-S Single Base Substitution C-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1446-S.SNP.9:16993693 chr09:016993693 0 W/16993693-16993693 FN1446-S Single Base Substitution A-G SPLICE_SITE_REGION HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1042-S.SNP.9:16996960 chr09:016996960 0 W/16996960-16996960 FN1042-S Single Base Substitution G-A INTRON HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN1142-S.SNP.9:17002527 chr09:017002527 0 W/17002527-17002527 FN1142-S Single Base Substitution G-A INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2791-S.SNP.9:17012595 chr09:017012595 0 W/17012595-17012595 FN2791-S SNP C -> G AC=1;AN=198;BQB=0.0194292;DP=3629;DP4=1581,1782,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.20152e-09;MQSB=0.985231;RPB=0.0789688;SGB=86.3098;VDB=0.0222219;EFF=INTRON(MODIFIER||||467|LOC_Os09g28019|protein_coding|CODING|LOC_Os09g28019.1|2|1) FN2179-S.SNP.9:17016293 chr09:017016293 0 W/17016293-17016293 FN2179-S SNP A -> G AC=2;AN=168;BQB=0.000195848;DP=3017;DP4=1669,1303,24,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23516e-08;MQSB=0.233693;RPB=0.139984;SGB=-257.746;VDB=0.595384;EFF=UTR_3_PRIME(MODIFIER||2074||177|LOC_Os09g28040|protein_coding|CODING|LOC_Os09g28040.1|4|1) FN3788-S.SNP.9:17041102 chr09:017041102 0 W/17041102-17041102 FN3788-S SNP C -> T AC=1;AN=190;BQB=0.947398;DP=3045;DP4=1656,1283,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000257048;MQSB=0.850577;RPB=0.861076;SGB=21.7749;VDB=0.773941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.9:17044585 chr09:017044585 0 W/17044585-17044585 FN2596-S SNP G -> A AC=1;AN=198;BQB=0.914944;DP=3465;DP4=1713,1604,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0025974;MQB=0.0181761;MQSB=0.0339602;RPB=0.975903;SGB=31.1689;VDB=0.817761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.9:17046624 chr09:017046624 0 W/17046624-17046624 FN3332-S SNP A -> T AC=2;AN=184;BQB=0.646741;DP=3583;DP4=1683,1622,19,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.52246e-22;MQSB=0.961792;RPB=0.554918;SGB=193.44;VDB=0.819194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T563S|1157|LOC_Os09g28070|protein_coding|CODING|LOC_Os09g28070.1|2|1) FN2791-S.SNP.9:17050486 chr09:017050486 0 W/17050486-17050486 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.719028;DP=3987;DP4=2035,1715,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.023075;MQB=1.28954e-05;MQSB=2.00214e-11;RPB=0.723328;SGB=67.9293;VDB=0.754445;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A549|1027|LOC_Os09g28080|protein_coding|CODING|LOC_Os09g28080.1|2|1) FN1407-S.SNP.9:17052502 chr09:017052502 0 W/17052502-17052502 FN1407-S Single Base Substitution C-T INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2687-S.SNP.9:17058830 chr09:017058830 0 W/17058830-17058830 FN2687-S SNP G -> A AC=1;AN=200;BQB=0.977841;DP=3875;DP4=2010,1567,5,2;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000374554;MQSB=0.804885;RPB=0.68666;SGB=26.6347;VDB=0.510937;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.9:17064921 chr09:017064921 0 W/17064921-17064921 FN3991-S SNP G -> T AC=1;AN=168;BQB=0.915608;DP=2648;DP4=1119,1420,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.73555e-09;MQSB=0.887617;RPB=0.466843;SGB=38.1788;VDB=0.820154;EFF=INTRON(MODIFIER||||489|LOC_Os09g28110|protein_coding|CODING|LOC_Os09g28110.1|2|1) FN2617-S.SNP.9:17067828 chr09:017067828 0 W/17067828-17067828 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.283414;DP=4385;DP4=2152,1964,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.57532e-14;MQSB=0.687736;RPB=0.922668;SGB=55.2955;VDB=0.221221;EFF=INTERGENIC(MODIFIER||||||||||1) FN-11.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN-11 Single Base Substitution T-C INTERGENIC Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-212.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN-212 Single Base Substitution T-C INTERGENIC HOMO SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1027-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN1027-S Single Base Substitution T-C INTERGENIC HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1237-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN1237-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1400-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN1400-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1638-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN1638-S Single Base Substitution T-C INTERGENIC Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2481.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN2481 SNP T -> C AC=1;AN=200;BQB=0.999805;DP=4124;DP4=1678,2021,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.92708e-06;MQSB=0.999276;RPB=0.996065;SGB=13.8539;VDB=0.0307945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN2709-S SNP T -> C AC=2;AN=200;BQB=0.757106;DP=4535;DP4=2024,2231,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.64382e-17;MQSB=0.996746;RPB=0.999999;SGB=105.163;VDB=0.874869;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN373-S Single Base Substitution T-C INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3746-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN3746-S SNP T -> C AC=1;AN=190;BQB=0.997214;DP=2492;DP4=1065,1306,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.17645e-06;MQSB=0.983602;RPB=0.755299;SGB=44.5415;VDB=0.207563;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN4043-S SNP T -> C AC=2;AN=168;BQB=0.583421;DP=2438;DP4=1045,1240,18,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.36818e-15;MQSB=0.978545;RPB=0.978855;SGB=63.5086;VDB=0.134306;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN475-S Single Base Substitution T-C INTERGENIC HET SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN897-S.SNP.9:17071614 chr09:017071614 0 W/17071614-17071614 FN897-S Single Base Substitution T-C INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN_N1-202-3.SNP.9:17073114 chr09:017073114 0 W/17073114-17073114 FN_N1-202-3 Single Base Substitution T-A HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN3563-S.SNP.9:17076374 chr09:017076374 0 W/17076374-17076374 FN3563-S SNP G -> A AC=2;AN=188;BQB=0.94688;DP=1083;DP4=936,88,25,0;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=5.4897e-09;MQSB=0.00221819;RPB=0.552233;SGB=103.418;VDB=0.294949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.9:17081287 chr09:017081287 0 W/17081287-17081287 FN2192-S SNP G -> C AC=1;AN=190;BQB=0.964546;DP=3398;DP4=1684,1283,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.61402e-09;MQSB=0.0836624;RPB=0.965289;SGB=31.3213;VDB=0.0208473;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.9:17085422 chr09:017085422 0 W/17085422-17085422 FN1662-S Single Base Substitution C-T INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2307.SNP.9:17088643 chr09:017088643 0 W/17088643-17088643 FN2307 SNP G -> A AC=2;AN=192;BQB=0.870261;DP=3935;DP4=1621,1761,26,31;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000762389;MQB=1.99303e-21;MQSB=0.391025;RPB=0.545769;SGB=149.913;VDB=0.43519;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.9:17096215 chr09:017096215 0 W/17096215-17096215 FN3484-S SNP C -> A AC=1;AN=184;BQB=0.975584;DP=2845;DP4=1402,1333,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58178e-07;MQSB=0.922891;RPB=0.182167;SGB=44.2207;VDB=0.0862644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.9:17096216 chr09:017096216 0 W/17096216-17096216 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.067037;DP=2841;DP4=1374,1331,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.73517e-07;MQSB=0.932038;RPB=0.315088;SGB=25.1826;VDB=0.174962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.9:17097200 chr09:017097200 0 W/17097200-17097200 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.539514;DP=3690;DP4=1856,1618,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00189702;MQB=9.95223e-07;MQSB=1.29094e-08;RPB=0.865451;SGB=72.5051;VDB=0.886912;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.9:17104685 chr09:017104685 0 W/17104685-17104685 FN2204-S SNP C -> A AC=1;AN=190;BQB=0.680623;DP=4710;DP4=2090,2344,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.16202e-15;MQSB=0.99531;RPB=0.398367;SGB=49.1985;VDB=0.856855;EFF=INTERGENIC(MODIFIER||||||||||1) FN_398-3-4-5.SNP.9:17107715 chr09:017107715 0 W/17107715-17107715 FN_398-3-4-5 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g28190 expressed protein SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN337-S.SNP.9:17107903 chr09:017107903 0 W/17107903-17107903 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN2475.SNP.9:17116038 chr09:017116038 0 W/17116038-17116038 FN2475 SNP G -> A AC=2;AN=200;BQB=0.221358;DP=4072;DP4=2069,1736,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.82976e-21;MQSB=0.209891;RPB=0.82879;SGB=137.609;VDB=0.431857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.9:17121077 chr09:017121077 0 W/17121077-17121077 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.509832;DP=4153;DP4=2115,1802,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28722e-11;MQSB=0.956565;RPB=0.982313;SGB=31.9395;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN-310.SNP.9:17127071 chr09:017127071 0 W/17127071-17127071 FN-310 Single Base Substitution G-A INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN2352.SNP.9:17131243 chr09:017131243 0 W/17131243-17131243 FN2352 SNP A -> C AC=1;AN=192;BQB=0.965503;DP=4708;DP4=2453,1965,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.23942e-10;MQSB=0.0102711;RPB=0.163761;SGB=39.1713;VDB=0.481185;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.9:17131389 chr09:017131389 0 W/17131389-17131389 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.907384;DP=2709;DP4=1474,1135,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.02345e-08;MQSB=0.209859;RPB=0.947626;SGB=57.644;VDB=0.856436;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-26-1.SNP.9:17138533 chr09:017138533 0 W/17138533-17138533 FN_N1-26-1 Single Base Substitution C-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN4253-S.SNP.9:17151105 chr09:017151105 0 W/17151105-17151105 FN4253-S SNP C -> A AC=1;AN=170;BQB=0.99396;DP=2821;DP4=1454,1279,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.2142e-06;MQSB=0.998658;RPB=0.880084;SGB=21.1076;VDB=0.221242;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.9:17152880 chr09:017152880 0 W/17152880-17152880 FN732-S Single Base Substitution T-C INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2223-S.SNP.9:17162804 chr09:017162804 0 W/17162804-17162804 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.813143;DP=3461;DP4=1588,1617,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.117596;MQB=0.432929;MQSB=1.33684e-42;RPB=0.12686;SGB=60.9777;VDB=0.185114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A393T|1779|LOC_Os09g28260|protein_coding|CODING|LOC_Os09g28260.1|3|1) FN901-S.SNP.9:17170804 chr09:017170804 0 W/17170804-17170804 FN901-S Single Base Substitution C-A INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1064-S.SNP.9:17172925 chr09:017172925 0 W/17172925-17172925 FN1064-S Single Base Substitution C-T INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN588-S.SNP.9:17178551 chr09:017178551 0 W/17178551-17178551 FN588-S Single Base Substitution G-T INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN-90.SNP.9:17181732 chr09:017181732 0 W/17181732-17181732 FN-90 Single Base Substitution T-C INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN1070-S.SNP.9:17187327 chr09:017187327 0 W/17187327-17187327 FN1070-S Single Base Substitution T-C INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2411.SNP.9:17215927 chr09:017215927 0 W/17215927-17215927 FN2411 SNP G -> A AC=1;AN=200;BQB=0.440216;DP=4083;DP4=1707,2185,7,5;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0;MQB=0.0855945;MQSB=0.259945;RPB=0.0164706;SGB=33.0593;VDB=0.355991;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.9:17217943 chr09:017217943 0 W/17217943-17217943 FN805-S Single Base Substitution G-T INTERGENIC HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN2373.SNP.9:17220086 chr09:017220086 0 W/17220086-17220086 FN2373 SNP C -> T AC=1;AN=192;BQB=0.0349924;DP=4626;DP4=2072,2236,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000216169;MQB=1.25529e-11;MQSB=0.806673;RPB=0.345157;SGB=27.6913;VDB=0.0999158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.9:17225773 chr09:017225773 0 W/17225773-17225773 FN2684-S SNP T -> G AC=1;AN=200;BQB=0.946406;DP=4976;DP4=2323,2416,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.37145e-22;MQSB=0.944348;RPB=0.985052;SGB=115.978;VDB=0.922242;EFF=INTRON(MODIFIER||||302|LOC_Os09g28354|protein_coding|CODING|LOC_Os09g28354.1|1|1) FN3723-S.SNP.9:17230124 chr09:017230124 0 W/17230124-17230124 FN3723-S SNP C -> T AC=2;AN=190;BQB=0.879081;DP=2892;DP4=1547,1197,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000691563;MQB=1.20166e-13;MQSB=0.220747;RPB=0.998756;SGB=92.9626;VDB=0.184139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.9:17234852 chr09:017234852 0 W/17234852-17234852 FN3730-S SNP T -> A AC=1;AN=190;BQB=0.769423;DP=2855;DP4=1565,1162,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.45037e-11;MQSB=0.991206;RPB=0.999054;SGB=71.6393;VDB=0.478585;EFF=INTRON(MODIFIER||||2313|LOC_Os09g28370|protein_coding|CODING|LOC_Os09g28370.1|21|1) FN623-S.SNP.9:17241700 chr09:017241700 0 W/17241700-17241700 FN623-S Single Base Substitution C-T INTRON HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN2295.SNP.9:17248866 chr09:017248866 0 W/17248866-17248866 FN2295 SNP G -> A AC=1;AN=192;BQB=0.878253;DP=5051;DP4=2320,2344,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.87592e-09;MQSB=0.893226;RPB=0.999584;SGB=-12.5113;VDB=0.906446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.9:17249526 chr09:017249526 0 W/17249526-17249526 FN2645-S SNP C -> T AC=2;AN=200;BQB=0.520049;DP=5410;DP4=2320,2604,22,35;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000369686;MQB=2.50289e-23;MQSB=2.50739e-06;RPB=0.945834;SGB=-112.709;VDB=0.999623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.9:17249912 chr09:017249912 0 W/17249912-17249912 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.941342;DP=5009;DP4=2295,2439,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78428e-09;MQSB=4.84689e-06;RPB=0.912746;SGB=9.48993;VDB=0.970247;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.9:17254189 chr09:017254189 0 W/17254189-17254189 FN_935-1 Single Base Substitution A-T HET LOC_Os09g28390 cytochrome P450, putative, expressed SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN763-S.SNP.9:17268523 chr09:017268523 0 W/17268523-17268523 FN763-S Single Base Substitution T-A INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1300-S.SNP.9:17269640 chr09:017269640 0 W/17269640-17269640 FN1300-S Single Base Substitution G-A INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN517-S.SNP.9:17270614 chr09:017270614 0 W/17270614-17270614 FN517-S Single Base Substitution G-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3486-S.SNP.9:17270684 chr09:017270684 0 W/17270684-17270684 FN3486-S SNP G -> T AC=1;AN=184;BQB=0.899141;DP=2588;DP4=1249,1112,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.96216e-07;MQSB=0.925043;RPB=0.285948;SGB=28.7043;VDB=0.112797;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.9:17271970 chr09:017271970 0 W/17271970-17271970 FN4272-S SNP G -> C AC=1;AN=170;BQB=0.899965;DP=1914;DP4=963,805,8,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.67236e-09;MQSB=0.271375;RPB=0.7079;SGB=74.528;VDB=0.563978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.9:17273348 chr09:017273348 0 W/17273348-17273348 FN3058-S SNP G -> A AC=1;AN=184;BQB=0.999152;DP=3176;DP4=1684,1392,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02505e-06;MQSB=0.985785;RPB=0.385864;SGB=48.7425;VDB=0.812537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.9:17275343 chr09:017275343 0 W/17275343-17275343 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.0267944;DP=3249;DP4=1488,1689,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7988e-13;MQSB=0.929912;RPB=0.679483;SGB=-6.30704;VDB=0.951175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.9:17277792 chr09:017277792 0 W/17277792-17277792 FN2795-S SNP C -> A AC=1;AN=198;BQB=0.736219;DP=4243;DP4=1932,2029,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.35516e-11;MQSB=0.157001;RPB=0.68203;SGB=61.7198;VDB=0.864975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.9:17280504 chr09:017280504 0 W/17280504-17280504 FN1097-S Single Base Substitution T-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2688-S.SNP.9:17283211 chr09:017283211 0 W/17283211-17283211 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.55092;DP=4631;DP4=2443,1923,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.93796e-06;MQSB=0.989065;RPB=0.9686;SGB=33.0593;VDB=0.248536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.9:17283553 chr09:017283553 0 W/17283553-17283553 FN2562-S SNP C -> T AC=1;AN=198;BQB=0.230513;DP=4773;DP4=2371,2134,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00167609;MQB=5.40701e-05;MQSB=0.0785522;RPB=0.932263;SGB=26.7492;VDB=0.944591;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.9:17283585 chr09:017283585 0 W/17283585-17283585 FN-386 Single Base Substitution G-A INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3715-S.SNP.9:17290128 chr09:017290128 0 W/17290128-17290128 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.484523;DP=3192;DP4=1412,1670,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34759e-07;MQSB=0.994214;RPB=0.367071;SGB=76.4186;VDB=0.632406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C153Y|440|LOC_Os09g28400|protein_coding|CODING|LOC_Os09g28400.1|3|1) FN2649-S.SNP.9:17300471 chr09:017300471 0 W/17300471-17300471 FN2649-S SNP G -> C AC=1;AN=200;BQB=0.997896;DP=4448;DP4=2027,1990,7,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00022482;MQB=5.66296e-06;MQSB=0.000172376;RPB=0.628151;SGB=72.6852;VDB=0.0835851;EFF=INTRON(MODIFIER||||437|LOC_Os09g28420|protein_coding|CODING|LOC_Os09g28420.1|2|1) FN4150-S.SNP.9:17311931 chr09:017311931 0 W/17311931-17311931 FN4150-S SNP T -> C AC=2;AN=170;BQB=0.980853;DP=2381;DP4=1001,1173,19,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.21356e-22;MQSB=0.955155;RPB=0.47681;SGB=120.944;VDB=0.778489;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L627|835|LOC_Os09g28450|protein_coding|CODING|LOC_Os09g28450.1|2|1) FN765-S.SNP.9:17312171 chr09:017312171 0 W/17312171-17312171 FN765-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g28450 paramyosin, putative, expressed SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN601-S.SNP.9:17325433 chr09:017325433 0 W/17325433-17325433 FN601-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2555-S.SNP.9:17330681 chr09:017330681 0 W/17330681-17330681 FN2555-S SNP T -> A AC=2;AN=198;BQB=0.980426;DP=3992;DP4=2125,1667,18,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.77769e-21;MQSB=0.984132;RPB=0.0654653;SGB=73.4614;VDB=0.861242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.9:17333540 chr09:017333540 0 W/17333540-17333540 FN1690-S SNP A -> T AC=1;AN=188;BQB=0.936608;DP=2963;DP4=1454,1472,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.50164e-10;MQSB=0.985117;RPB=0.991799;SGB=-12.8266;VDB=0.242438;EFF=INTERGENIC(MODIFIER||||||||||1) FN455-S.SNP.9:17342151 chr09:017342151 0 W/17342151-17342151 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1313-S.SNP.9:17376632 chr09:017376632 0 W/17376632-17376632 FN1313-S Single Base Substitution C-T INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN995-S.SNP.9:17376632 chr09:017376632 0 W/17376632-17376632 FN995-S Single Base Substitution C-T INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN1086-S.SNP.9:17382564 chr09:017382564 0 W/17382564-17382564 FN1086-S Single Base Substitution A-T INTRON HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-142.SNP.9:17385020 chr09:017385020 0 W/17385020-17385020 FN-142 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN-142.SNP.9:17385025 chr09:017385025 0 W/17385025-17385025 FN-142 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g28570 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN343-S.SNP.9:17393913 chr09:017393913 0 W/17393913-17393913 FN343-S Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN343-S.SNP.9:17393914 chr09:017393914 0 W/17393914-17393914 FN343-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN75-S-43.SNP.9:17403901 chr09:017403901 0 W/17403901-17403901 FN75-S-43 SNP G -> A AC=1;AN=190;BQB=0.144508;DP=4091;DP4=1808,2029,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7143e-09;MQSB=0.71613;RPB=0.281427;SGB=38.983;VDB=0.221374;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.9:17411151 chr09:017411151 0 W/17411151-17411151 FN_543-2-6 Single Base Substitution T-A HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN2454.SNP.9:17416853 chr09:017416853 0 W/17416853-17416853 FN2454 SNP G -> A AC=2;AN=200;BQB=0.688527;DP=4472;DP4=2293,1903,23,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.9941e-18;MQSB=0.941615;RPB=0.0899648;SGB=38.383;VDB=0.849228;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.9:17423302 chr09:017423302 0 W/17423302-17423302 FN_N1-150-1 Single Base Substitution T-A HET SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1438-S.SNP.9:17425455 chr09:017425455 0 W/17425455-17425455 FN1438-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1287-S.SNP.9:17428018 chr09:017428018 0 W/17428018-17428018 FN1287-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1287-S.SNP.9:17428019 chr09:017428019 0 W/17428019-17428019 FN1287-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g28660 gibberellin receptor GID1L2, putative, expressed SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2656-S.SNP.9:17446565 chr09:017446565 0 W/17446565-17446565 FN2656-S SNP G -> C AC=1;AN=200;BQB=0.97695;DP=4895;DP4=2300,2287,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29134e-15;MQSB=0.503348;RPB=0.99997;SGB=27.1468;VDB=0.43567;EFF=INTERGENIC(MODIFIER||||||||||1) FN830-S.SNP.9:17450520 chr09:017450520 0 W/17450520-17450520 FN830-S Single Base Substitution G-T INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN1114-S.SNP.9:17453514 chr09:017453514 0 W/17453514-17453514 FN1114-S Single Base Substitution T-C INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3815-S.SNP.9:17454713 chr09:017454713 0 W/17454713-17454713 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.960092;DP=3386;DP4=1581,1486,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11152e-09;MQSB=0.82682;RPB=0.997342;SGB=10.3266;VDB=0.720877;EFF=INTRON(MODIFIER||||287|LOC_Os09g28710|protein_coding|CODING|LOC_Os09g28710.1|1|1) FN2739-S.SNP.9:17464090 chr09:017464090 0 W/17464090-17464090 FN2739-S SNP A -> G AC=1;AN=200;BQB=0.813062;DP=5100;DP4=2426,2442,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196078;MQB=1.42648e-11;MQSB=0.999606;RPB=0.996967;SGB=95.7111;VDB=0.825376;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.9:17469763 chr09:017469763 0 W/17469763-17469763 FN2279-S SNP G -> A AC=2;AN=190;BQB=0.351058;DP=5101;DP4=2341,2441,38,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.86656e-39;MQSB=0.650856;RPB=0.994642;SGB=80.2511;VDB=0.131352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.9:17469764 chr09:017469764 0 W/17469764-17469764 FN2279-S SNP G -> C AC=2;AN=190;BQB=0.585416;DP=5082;DP4=2281,2465,38,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.11298e-40;MQSB=0.655339;RPB=0.720457;SGB=83.3588;VDB=0.0828866;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.9:17473367 chr09:017473367 0 W/17473367-17473367 FN-126 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os09g28760 CXE carboxylesterase, putative, expressed SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1744-S.SNP.9:17473367 chr09:017473367 0 W/17473367-17473367 FN1744-S SNP G -> A AC=1;AN=188;BQB=0.982182;DP=2529;DP4=1750,717,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.28324e-10;MQSB=0.98033;RPB=0.887246;SGB=60.7873;VDB=0.248805;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W109*|149|LOC_Os09g28760|protein_coding|CODING|LOC_Os09g28760.1|1|1) FN1463-S.SNP.9:17474300 chr09:017474300 0 W/17474300-17474300 FN1463-S Single Base Substitution C-T INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1553-S.SNP.9:17474300 chr09:017474300 0 W/17474300-17474300 FN1553-S Single Base Substitution C-T INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2725-S.SNP.9:17483253 chr09:017483253 0 W/17483253-17483253 FN2725-S SNP T -> C AC=2;AN=200;BQB=0.744059;DP=5086;DP4=2461,2420,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.70635e-20;MQSB=0.991803;RPB=0.440438;SGB=84.1935;VDB=0.595992;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.9:17489993 chr09:017489993 0 W/17489993-17489993 FN718-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN438-S.SNP.9:17495224 chr09:017495224 0 W/17495224-17495224 FN438-S Single Base Substitution G-C STOP_GAINED HET LOC_Os09g28800 hypothetical protein SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN_776-5-1.SNP.9:17503718 chr09:017503718 0 W/17503718-17503718 FN_776-5-1 Single Base Substitution T-C HET LOC_Os09g28820 hypothetical protein SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2587-S.SNP.9:17508980 chr09:017508980 0 W/17508980-17508980 FN2587-S SNP T -> A AC=2;AN=198;BQB=0.620866;DP=4159;DP4=1987,1886,24,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.9473e-26;MQSB=0.849142;RPB=0.778342;SGB=5.80318;VDB=0.665767;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E160V|444|LOC_Os09g28830|protein_coding|CODING|LOC_Os09g28830.1|3|1) FN2242-S.SNP.9:17510986 chr09:017510986 0 W/17510986-17510986 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.843983;DP=4303;DP4=1809,2042,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000484279;MQSB=0.0107115;RPB=0.674713;SGB=25.439;VDB=0.0015167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.9:17512984 chr09:017512984 0 W/17512984-17512984 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.128282;DP=5191;DP4=2421,2579,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43085e-11;MQSB=0.6157;RPB=0.680413;SGB=61.9006;VDB=0.407746;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.9:17515845 chr09:017515845 0 W/17515845-17515845 FN533-S Single Base Substitution A-C INTRON HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN1349-S.SNP.9:17516420 chr09:017516420 0 W/17516420-17516420 FN1349-S Single Base Substitution C-A INTRON HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN931-S.SNP.9:17522761 chr09:017522761 0 W/17522761-17522761 FN931-S Single Base Substitution C-G INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3662-S.SNP.9:17530811 chr09:017530811 0 W/17530811-17530811 FN3662-S SNP G -> A AC=2;AN=190;BQB=0.988791;DP=2812;DP4=1123,1530,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.68543e-13;MQSB=0.998079;RPB=0.136386;SGB=46.6446;VDB=0.943875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1532-S.SNP.9:17533148 chr09:017533148 0 W/17533148-17533148 FN1532-S Single Base Substitution C-T INTERGENIC HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2649-S.SNP.9:17535915 chr09:017535915 0 W/17535915-17535915 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.900585;DP=4825;DP4=2377,2256,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207254;MQB=1.19026e-11;MQSB=0.914646;RPB=0.802713;SGB=77.2904;VDB=0.390055;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R382|610|LOC_Os09g28850|protein_coding|CODING|LOC_Os09g28850.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R352|580|LOC_Os09g28850|protein_coding|CODING|LOC_Os09g28850.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R352|580|LOC_Os09g28850|protein_coding|CODING|LOC_Os09g28850.3|5|1) FN2435.SNP.9:17548174 chr09:017548174 0 W/17548174-17548174 FN2435 SNP G -> A AC=1;AN=200;BQB=0.999153;DP=4345;DP4=2079,1943,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.4702e-10;MQSB=0.890154;RPB=0.21354;SGB=43.8747;VDB=0.702026;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.9:17552190 chr09:017552190 0 W/17552190-17552190 FN4093-S SNP A -> G AC=2;AN=182;BQB=0.916101;DP=3034;DP4=1669,1297,20,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.81646e-16;MQSB=0.971414;RPB=0.476628;SGB=91.8015;VDB=0.219768;EFF=UTR_3_PRIME(MODIFIER||1130||244|LOC_Os09g28880|protein_coding|CODING|LOC_Os09g28880.1|1|1) FN-397.SNP.9:17559665 chr09:017559665 0 W/17559665-17559665 FN-397 Single Base Substitution C-T INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN4106-S.SNP.9:17560735 chr09:017560735 0 W/17560735-17560735 FN4106-S SNP T -> A AC=2;AN=182;BQB=0.996939;DP=3282;DP4=1765,1371,11,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.51148e-12;MQSB=0.993677;RPB=0.98953;SGB=63.7146;VDB=0.975451;EFF=INTERGENIC(MODIFIER||||||||||1) FN-145.SNP.9:17572960 chr09:017572960 0 W/17572960-17572960 FN-145 Single Base Substitution A-G INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3802-S.SNP.9:17577643 chr09:017577643 0 W/17577643-17577643 FN3802-S SNP C -> T AC=1;AN=190;BQB=0.956877;DP=3014;DP4=1582,1275,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.66877e-11;MQSB=0.824766;RPB=0.999533;SGB=64.5316;VDB=0.349814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.9:17580736 chr09:017580736 0 W/17580736-17580736 FN2657-S SNP T -> A AC=1;AN=200;BQB=0.958302;DP=4741;DP4=2137,2286,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.44311e-14;MQSB=0.239844;RPB=0.315089;SGB=-39.2639;VDB=0.826789;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.9:17582661 chr09:017582661 0 W/17582661-17582661 FN1102-S Single Base Substitution G-C INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN830-S.SNP.9:17585816 chr09:017585816 0 W/17585816-17585816 FN830-S Single Base Substitution T-A INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN830-S.SNP.9:17585817 chr09:017585817 0 W/17585817-17585817 FN830-S Single Base Substitution A-T INTERGENIC HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN3845-S.SNP.9:17588625 chr09:017588625 0 W/17588625-17588625 FN3845-S SNP G -> T AC=1;AN=190;BQB=0.77467;DP=2999;DP4=1329,1551,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58796e-07;MQSB=0.844554;RPB=0.624334;SGB=44.5415;VDB=0.650903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L222I|334|LOC_Os09g28930|protein_coding|CODING|LOC_Os09g28930.1|1|1) FN3845-S.SNP.9:17588626 chr09:017588626 0 W/17588626-17588626 FN3845-S SNP C -> A AC=1;AN=190;BQB=0.909944;DP=3002;DP4=1323,1540,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.87795e-08;MQSB=0.798934;RPB=0.887889;SGB=39.6545;VDB=0.663114;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P221|334|LOC_Os09g28930|protein_coding|CODING|LOC_Os09g28930.1|1|1) FN4149-S.SNP.9:17588732 chr09:017588732 0 W/17588732-17588732 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.937611;DP=2896;DP4=1291,1517,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.67521e-08;MQSB=1;RPB=0.153251;SGB=70.0854;VDB=0.124119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P186L|334|LOC_Os09g28930|protein_coding|CODING|LOC_Os09g28930.1|1|1) FN2631-S.SNP.9:17591339 chr09:017591339 0 W/17591339-17591339 FN2631-S SNP C -> T AC=2;AN=200;BQB=0.604314;DP=4718;DP4=2560,1880,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.51063e-27;MQSB=0.923355;RPB=0.17545;SGB=162.845;VDB=0.426697;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.9:17606675 chr09:017606675 0 W/17606675-17606675 FN-344 Single Base Substitution A-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2338.SNP.9:17607390 chr09:017607390 0 W/17607390-17607390 FN2338 SNP C -> T AC=1;AN=192;BQB=0.177421;DP=5040;DP4=2393,1885,18,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.53359e-22;MQSB=0.986763;RPB=0.402343;SGB=93.0226;VDB=0.169414;EFF=INTRON(MODIFIER||||937|LOC_Os09g28940|protein_coding|CODING|LOC_Os09g28940.1|1|1) FN1557-S.SNP.9:17611016 chr09:017611016 0 W/17611016-17611016 FN1557-S Single Base Substitution T-G INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN4123-S.SNP.9:17612710 chr09:017612710 0 W/17612710-17612710 FN4123-S SNP G -> T AC=1;AN=182;BQB=0.962501;DP=2611;DP4=953,1598,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.93215e-05;MQSB=0.286134;RPB=0.252701;SGB=35.0899;VDB=0.0348254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.9:17615727 chr09:017615727 0 W/17615727-17615727 FN1114-S Single Base Substitution C-T INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN851-S.SNP.9:17617863 chr09:017617863 0 W/17617863-17617863 FN851-S Single Base Substitution C-T INTRON HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2530-S.SNP.9:17619013 chr09:017619013 0 W/17619013-17619013 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.932938;DP=3849;DP4=1869,1786,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00155885;MQB=4.79531e-08;MQSB=0.163978;RPB=0.800035;SGB=40.149;VDB=0.49615;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H26Y|810|LOC_Os09g28970|protein_coding|CODING|LOC_Os09g28970.1|1|1) FN815-S.SNP.9:17620178 chr09:017620178 0 W/17620178-17620178 FN815-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g28970 retrotransposon protein, putative, unclassified, expressed SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1423-S.SNP.9:17627418 chr09:017627418 0 W/17627418-17627418 FN1423-S Single Base Substitution C-G INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1299-S.SNP.9:17629748 chr09:017629748 0 W/17629748-17629748 FN1299-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g29000 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2415.SNP.9:17634442 chr09:017634442 0 W/17634442-17634442 FN2415 SNP G -> T AC=1;AN=200;BQB=0.67684;DP=4043;DP4=1909,1751,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88685e-06;MQSB=0.00440022;RPB=0.172954;SGB=40.2696;VDB=0.17229;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R106|287|LOC_Os09g29020|protein_coding|CODING|LOC_Os09g29020.1|1|1) FN3820-S.SNP.9:17636900 chr09:017636900 0 W/17636900-17636900 FN3820-S SNP C -> T AC=1;AN=190;BQB=0.997615;DP=2600;DP4=1440,1051,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93142e-05;MQSB=0.992753;RPB=0.133616;SGB=25.439;VDB=0.273746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.9:17643115 chr09:017643115 0 W/17643115-17643115 FN1068-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g29050 mitochondrial carrier protein, putative, expressed SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1068-S.SNP.9:17643116 chr09:017643116 0 W/17643116-17643116 FN1068-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g29050 mitochondrial carrier protein, putative, expressed SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1082-S.SNP.9:17648230 chr09:017648230 0 W/17648230-17648230 FN1082-S Single Base Substitution C-A INTRON HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN-327.SNP.9:17653367 chr09:017653367 0 W/17653367-17653367 FN-327 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g29070 glucose-6-phosphate isomerase, putative, expressed SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN2110-S.SNP.9:17655579 chr09:017655579 0 W/17655579-17655579 FN2110-S SNP T -> C AC=1;AN=168;BQB=0.999978;DP=3279;DP4=2175,1068,16,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42642e-09;MQSB=0.838314;RPB=0.768162;SGB=-40.0741;VDB=0.254618;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.9:17657232 chr09:017657232 0 W/17657232-17657232 FN765-S Single Base Substitution T-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN765-S.SNP.9:17657233 chr09:017657233 0 W/17657233-17657233 FN765-S Single Base Substitution G-A INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN1384-S.SNP.9:17658022 chr09:017658022 0 W/17658022-17658022 FN1384-S Single Base Substitution A-G INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2485.SNP.9:17664849 chr09:017664849 0 W/17664849-17664849 FN2485 SNP G -> A AC=1;AN=200;BQB=0.0343977;DP=4592;DP4=2184,2134,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80908e-11;MQSB=0.972574;RPB=0.899293;SGB=69.1109;VDB=0.854026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3574-S.SNP.9:17679740 chr09:017679740 0 W/17679740-17679740 FN3574-S SNP C -> A AC=1;AN=188;BQB=0.965846;DP=2734;DP4=1287,1375,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.60369e-07;MQSB=0.718129;RPB=0.892128;SGB=48.979;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.9:17685612 chr09:017685612 0 W/17685612-17685612 FN908-S Single Base Substitution A-G INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3563-S.SNP.9:17685975 chr09:017685975 0 W/17685975-17685975 FN3563-S SNP A -> T AC=1;AN=188;BQB=0.991627;DP=2536;DP4=1215,1169,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.70732e-06;MQSB=0.671121;RPB=0.308632;SGB=32.441;VDB=0.239031;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.9:17686523 chr09:017686523 0 W/17686523-17686523 FN1307-S Single Base Substitution A-C INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1552-S.SNP.9:17687780 chr09:017687780 0 W/17687780-17687780 FN1552-S SNP G -> A AC=2;AN=188;BQB=0.0247766;DP=3658;DP4=1816,1782,20,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.11658e-13;MQSB=0.989022;RPB=0.327206;SGB=-86.6665;VDB=0.0547716;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.9:17696941 chr09:017696941 0 W/17696941-17696941 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.842347;DP=4800;DP4=2377,2120,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.79778e-12;MQSB=0.174887;RPB=0.222195;SGB=-12.5051;VDB=0.508649;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.9:17708518 chr09:017708518 0 W/17708518-17708518 FN-217 Single Base Substitution T-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1438-S.SNP.9:17718659 chr09:017718659 0 W/17718659-17718659 FN1438-S Single Base Substitution A-G INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2577-S.SNP.9:17726780 chr09:017726780 0 W/17726780-17726780 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.966384;DP=4318;DP4=2192,1838,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.56441e-08;MQSB=0.91452;RPB=0.342497;SGB=26.7492;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.9:17727876 chr09:017727876 0 W/17727876-17727876 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.9842;DP=2883;DP4=1319,1471,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.04873e-06;MQSB=0.976232;RPB=0.999907;SGB=35.4339;VDB=0.513455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.9:17747201 chr09:017747201 0 W/17747201-17747201 FN3730-S SNP T -> C AC=1;AN=190;BQB=0.873309;DP=2709;DP4=1552,964,18,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19349e-16;MQSB=0.969506;RPB=0.0278815;SGB=-9.34484;VDB=0.480218;EFF=START_GAINED(LOW||||223|LOC_Os09g29200|protein_coding|CODING|LOC_Os09g29200.1|1|1),UTR_5_PRIME(MODIFIER||100||223|LOC_Os09g29200|protein_coding|CODING|LOC_Os09g29200.1|1|1) FN2729-S.SNP.9:17758474 chr09:017758474 0 W/17758474-17758474 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.991255;DP=5289;DP4=2642,2338,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60773e-13;MQSB=0.954925;RPB=0.831971;SGB=45.1159;VDB=0.157553;EFF=INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.2|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.3|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.1|1|1) FN-144.SNP.9:17759055 chr09:017759055 0 W/17759055-17759055 FN-144 Single Base Substitution T-A INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2194-S.SNP.9:17760228 chr09:017760228 0 W/17760228-17760228 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.336169;DP=4066;DP4=1841,1900,7,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.56892e-14;MQSB=0.176111;RPB=0.93115;SGB=103.742;VDB=0.823957;EFF=INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.2|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.3|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.1|1|1) FN1734-S.SNP.9:17760291 chr09:017760291 0 W/17760291-17760291 FN1734-S SNP G -> A AC=2;AN=188;BQB=0.982744;DP=3744;DP4=1853,1834,21,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.38059e-24;MQSB=0.999186;RPB=0.9099;SGB=-0.330801;VDB=0.47364;EFF=INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.2|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.3|1|1),INTRON(MODIFIER||||361|LOC_Os09g29239|protein_coding|CODING|LOC_Os09g29239.1|1|1) FN-95.SNP.9:17771113 chr09:017771113 0 W/17771113-17771113 FN-95 Single Base Substitution C-T STOP_GAINED HET LOC_Os09g29239 purine permease, putative, expressed SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN804-S.SNP.9:17789824 chr09:017789824 0 W/17789824-17789824 FN804-S Single Base Substitution G-T INTERGENIC HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2257-S.SNP.9:17796114 chr09:017796114 0 W/17796114-17796114 FN2257-S SNP A -> T AC=1;AN=190;BQB=0.279219;DP=4895;DP4=2555,2071,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.98703e-12;MQSB=0.686307;RPB=0.696046;SGB=19.6499;VDB=0.845781;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.9:17797063 chr09:017797063 0 W/17797063-17797063 FN450-S Single Base Substitution C-T INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN3909-S.SNP.9:17797789 chr09:017797789 0 W/17797789-17797789 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.435471;DP=2570;DP4=1441,1034,11,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.48273e-08;MQSB=0.674296;RPB=0.572012;SGB=35.6659;VDB=0.956572;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.9:17805445 chr09:017805445 0 W/17805445-17805445 FN489-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g29330 retrotransposon protein, putative, unclassified, expressed SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN468-S.SNP.9:17812413 chr09:017812413 0 W/17812413-17812413 FN468-S Single Base Substitution G-A INTERGENIC HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2212-S.SNP.9:17825779 chr09:017825779 0 W/17825779-17825779 FN2212-S SNP C -> T AC=1;AN=190;BQB=0.781914;DP=4523;DP4=2095,2135,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.45554e-17;MQSB=0.465674;RPB=0.560219;SGB=149.281;VDB=0.511245;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.9:17833544 chr09:017833544 0 W/17833544-17833544 FN1640-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1640-S.SNP.9:17833545 chr09:017833545 0 W/17833545-17833545 FN1640-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN_831-4-1.SNP.9:17839782 chr09:017839782 0 W/17839782-17839782 FN_831-4-1 Single Base Substitution A-G HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2675-S.SNP.9:17850822 chr09:017850822 0 W/17850822-17850822 FN2675-S SNP A -> T AC=1;AN=200;BQB=0.927862;DP=4794;DP4=2322,2270,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.924e-13;MQSB=0.874637;RPB=0.705364;SGB=100.316;VDB=0.796491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.9:17854692 chr09:017854692 0 W/17854692-17854692 FN2285 SNP C -> T AC=1;AN=192;BQB=0.910532;DP=5202;DP4=2569,2363,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.47234e-13;MQSB=0.95178;RPB=0.95126;SGB=15.1765;VDB=0.990321;EFF=INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|11|1),INTRON(MODIFIER||||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|13|1) FN2285.SNP.9:17854693 chr09:017854693 0 W/17854693-17854693 FN2285 SNP C -> T AC=1;AN=192;BQB=0.684802;DP=5202;DP4=2509,2329,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.36412e-12;MQSB=0.994402;RPB=0.949455;SGB=39.1713;VDB=0.942752;EFF=INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|11|1),INTRON(MODIFIER||||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|13|1) FN3356-S.SNP.9:17857464 chr09:017857464 0 W/17857464-17857464 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.299303;DP=3054;DP4=1671,1297,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.55199e-09;MQSB=0.914274;RPB=0.761496;SGB=39.2697;VDB=0.821449;EFF=UTR_3_PRIME(MODIFIER||307||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|11|1),UTR_3_PRIME(MODIFIER||307||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|13|1),UTR_3_PRIME(MODIFIER||307||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|23|1) FN3596-S.SNP.9:17860384 chr09:017860384 0 W/17860384-17860384 FN3596-S SNP A -> C AC=1;AN=188;BQB=0.994107;DP=3117;DP4=1406,1526,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00834135;MQB=0.0189092;MQSB=0.0188676;RPB=0.0559557;SGB=60.7873;VDB=0.799558;EFF=INTRON(MODIFIER||||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|17|1),INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|5|1),INTRON(MODIFIER||||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|7|1) FN1682-S.SNP.9:17863237 chr09:017863237 0 W/17863237-17863237 FN1682-S SNP C -> T AC=2;AN=188;BQB=0.53064;DP=3183;DP4=1633,1504,20,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.2489e-14;MQSB=0.997339;RPB=0.999601;SGB=-43.7584;VDB=0.976269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|3|1),INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|1|1) FN2439.SNP.9:17863237 chr09:017863237 0 W/17863237-17863237 FN2439 SNP C -> T AC=2;AN=200;BQB=0.646114;DP=3780;DP4=1738,1823,7,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.00608e-09;MQSB=0.979453;RPB=0.990306;SGB=40.2696;VDB=0.981424;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|3|1),INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|1|1) FN2549-S.SNP.9:17863237 chr09:017863237 0 W/17863237-17863237 FN2549-S SNP C -> T AC=2;AN=198;BQB=0.999751;DP=2998;DP4=1426,1409,7,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.78819e-06;MQSB=0.982148;RPB=0.255235;SGB=1.37381;VDB=0.202214;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|13|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V68I|377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.3|3|1),INTRON(MODIFIER||||289|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.2|1|1) FN1679-S.SNP.9:17866125 chr09:017866125 0 W/17866125-17866125 FN1679-S SNP A -> C AC=1;AN=188;BQB=0.668081;DP=3805;DP4=1762,1973,19,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.32364e-19;MQSB=0.947692;RPB=0.978263;SGB=-142.945;VDB=0.194191;EFF=UTR_5_PRIME(MODIFIER||1709||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|6|1) FN3319-S.SNP.9:17868555 chr09:017868555 0 W/17868555-17868555 FN3319-S SNP G -> A AC=1;AN=184;BQB=0.0619973;DP=3293;DP4=1714,1378,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00706647;MQSB=0.0756112;RPB=0.983684;SGB=35.1773;VDB=0.947131;EFF=UTR_5_PRIME(MODIFIER||4139||377|LOC_Os09g29404|protein_coding|CODING|LOC_Os09g29404.1|1|1) FN1233-S.SNP.9:17869187 chr09:017869187 0 W/17869187-17869187 FN1233-S Single Base Substitution G-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN3411-S.SNP.9:17872374 chr09:017872374 0 W/17872374-17872374 FN3411-S SNP C -> T AC=1;AN=184;BQB=0.80644;DP=2619;DP4=1512,1031,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.04083e-08;MQSB=0.902022;RPB=0.121344;SGB=39.2697;VDB=0.298272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.9:17875778 chr09:017875778 0 W/17875778-17875778 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.806118;DP=4956;DP4=2213,2562,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000403551;MQB=5.53246e-09;MQSB=0.932843;RPB=0.417455;SGB=3.06925;VDB=0.14593;EFF=INTRON(MODIFIER||||417|LOC_Os09g29420|protein_coding|CODING|LOC_Os09g29420.1|3|1) FN2723-S.SNP.9:17876182 chr09:017876182 0 W/17876182-17876182 FN2723-S SNP A -> C AC=1;AN=200;BQB=0.938949;DP=4970;DP4=2438,2357,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.63298e-14;MQSB=0.999958;RPB=0.44124;SGB=69.1109;VDB=0.565392;EFF=INTRON(MODIFIER||||417|LOC_Os09g29420|protein_coding|CODING|LOC_Os09g29420.1|4|1) FN2435.SNP.9:17878185 chr09:017878185 0 W/17878185-17878185 FN2435 SNP C -> A AC=1;AN=200;BQB=0.999174;DP=4858;DP4=2289,2171,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.72906e-14;MQSB=0.927853;RPB=0.856906;SGB=20.7261;VDB=0.653205;EFF=INTRON(MODIFIER||||417|LOC_Os09g29420|protein_coding|CODING|LOC_Os09g29420.1|9|1) FN789-S.SNP.9:17878320 chr09:017878320 0 W/17878320-17878320 FN789-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g29420 queuine tRNA-ribosyltransferase, putative, expressed SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN486-S.SNP.9:17888589 chr09:017888589 0 W/17888589-17888589 FN486-S Single Base Substitution A-G INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1622-S.SNP.9:17889772 chr09:017889772 0 W/17889772-17889772 FN1622-S Single Base Substitution C-T INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN3359-S.SNP.9:17891017 chr09:017891017 0 W/17891017-17891017 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.962616;DP=2657;DP4=1327,1248,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60405e-09;MQSB=0.995633;RPB=0.721251;SGB=39.2697;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.9:17891018 chr09:017891018 0 W/17891018-17891018 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.982668;DP=2658;DP4=1323,1244,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00881e-08;MQSB=0.966504;RPB=0.955504;SGB=39.2697;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.9:17892820 chr09:017892820 0 W/17892820-17892820 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.967388;DP=3534;DP4=2044,1396,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06376e-06;MQSB=0.659385;RPB=0.453626;SGB=48.7425;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.9:17899429 chr09:017899429 0 W/17899429-17899429 FN2598-S SNP T -> G AC=1;AN=198;BQB=0.904543;DP=3926;DP4=1846,1818,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22189e-06;MQSB=0.935504;RPB=0.972608;SGB=25.7687;VDB=0.416035;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.9:17900087 chr09:017900087 0 W/17900087-17900087 FN1475-S Single Base Substitution A-T INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1475-S.SNP.9:17900088 chr09:017900088 0 W/17900088-17900088 FN1475-S Single Base Substitution C-G INTERGENIC Homo SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2146-S.SNP.9:17900424 chr09:017900424 0 W/17900424-17900424 FN2146-S SNP T -> A AC=1;AN=168;BQB=0.0139165;DP=3589;DP4=2009,1548,16,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.02504e-08;MQSB=0.950142;RPB=0.746732;SGB=-69.6373;VDB=0.682837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.9:17922486 chr09:017922486 0 W/17922486-17922486 FN2220-S SNP G -> T AC=2;AN=190;BQB=0.963837;DP=4445;DP4=2154,2009,29,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.45293e-26;MQSB=0.995558;RPB=0.613879;SGB=58.4968;VDB=0.394853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A437S|595|LOC_Os09g29470|protein_coding|CODING|LOC_Os09g29470.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A437S|560|LOC_Os09g29470|protein_coding|CODING|LOC_Os09g29470.2|7|1),UTR_3_PRIME(MODIFIER||23||429|LOC_Os09g29470|protein_coding|CODING|LOC_Os09g29470.3|7|1) FN936-S.SNP.9:17923109 chr09:017923109 0 W/17923109-17923109 FN936-S Single Base Substitution A-T INTRON HOMO SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2781-S.SNP.9:17924429 chr09:017924429 0 W/17924429-17924429 FN2781-S SNP A -> C AC=1;AN=198;BQB=0.942828;DP=4522;DP4=2433,1866,23,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.70343e-22;MQSB=0.970335;RPB=0.999555;SGB=78.6516;VDB=0.185819;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.9:17926627 chr09:017926627 0 W/17926627-17926627 FN916-S Single Base Substitution C-T INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2386.SNP.9:17927268 chr09:017927268 0 W/17927268-17927268 FN2386 SNP A -> G AC=1;AN=192;BQB=0.897093;DP=4929;DP4=2369,2224,9,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.82011e-16;MQSB=0.902602;RPB=0.939452;SGB=24.5626;VDB=0.430715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.9:17927308 chr09:017927308 0 W/17927308-17927308 FN2261-S SNP A -> G AC=1;AN=190;BQB=0.0964707;DP=4704;DP4=2295,1944,27,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000212585;MQB=2.00561e-24;MQSB=0.5318;RPB=0.87802;SGB=5.05596;VDB=0.351013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.9:17932051 chr09:017932051 0 W/17932051-17932051 FN3666-S SNP A -> G AC=1;AN=190;BQB=0.954647;DP=2877;DP4=1523,1201,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.71325e-09;MQSB=0.99124;RPB=0.956155;SGB=53.8699;VDB=0.894192;EFF=UTR_3_PRIME(MODIFIER||1518||178|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.2|3|1),INTRON(MODIFIER||||250|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.1|4|1),INTRON(MODIFIER||||178|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.3|3|1) FN3368-S.SNP.9:17932399 chr09:017932399 0 W/17932399-17932399 FN3368-S SNP C -> A AC=1;AN=184;BQB=0.987379;DP=2868;DP4=1364,1413,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.07783e-11;MQSB=0.992637;RPB=0.937941;SGB=49.835;VDB=0.412274;EFF=UTR_3_PRIME(MODIFIER||1866||178|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.2|3|1),UTR_3_PRIME(MODIFIER||1866||178|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.3|4|1),UTR_3_PRIME(MODIFIER||92||250|LOC_Os09g29480|protein_coding|CODING|LOC_Os09g29480.1|5|1) FN932-S.SNP.9:17940606 chr09:017940606 0 W/17940606-17940606 FN932-S Single Base Substitution C-T INTERGENIC HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN2788-S.SNP.9:17945055 chr09:017945055 0 W/17945055-17945055 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.992557;DP=6169;DP4=2088,3694,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0596531;MQB=0.0166204;MQSB=5.61905e-30;RPB=0.13021;SGB=36.5539;VDB=0.318432;EFF=INTRON(MODIFIER||||712|LOC_Os09g29500|protein_coding|CODING|LOC_Os09g29500.1|2|1) FN-182.SNP.9:17950594 chr09:017950594 0 W/17950594-17950594 FN-182 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g29510 OsWAK80 - OsWAK receptor-like protein kinase, expressed SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN3455-S.SNP.9:17956001 chr09:017956001 0 W/17956001-17956001 FN3455-S SNP T -> A AC=1;AN=184;BQB=0.978828;DP=2759;DP4=1278,1417,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.60799e-07;MQSB=0.980841;RPB=0.139097;SGB=39.699;VDB=0.294276;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.9:17958117 chr09:017958117 0 W/17958117-17958117 FN629-S Single Base Substitution C-T INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2559-S.SNP.9:17959141 chr09:017959141 0 W/17959141-17959141 FN2559-S SNP C -> T AC=1;AN=198;BQB=0.974084;DP=3799;DP4=1633,1869,8,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.41928e-05;MQSB=0.790593;RPB=0.416276;SGB=22.1736;VDB=0.127239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.9:17959141 chr09:017959141 0 W/17959141-17959141 FN3733-S SNP C -> T AC=2;AN=190;BQB=0.92022;DP=2256;DP4=762,1345,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81506e-14;MQSB=0.327013;RPB=0.692174;SGB=140.173;VDB=0.932088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.9:17959141 chr09:017959141 0 W/17959141-17959141 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.999579;DP=2199;DP4=835,1243,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.68981e-06;MQSB=0.203634;RPB=0.997362;SGB=47.0672;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.9:17964797 chr09:017964797 0 W/17964797-17964797 FN2498 SNP T -> A AC=1;AN=200;BQB=0.956737;DP=4872;DP4=2402,2129,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.63814e-14;MQSB=0.997329;RPB=0.901159;SGB=47.7211;VDB=0.683677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.9:17969887 chr09:017969887 0 W/17969887-17969887 FN3764-S SNP A -> T AC=1;AN=190;BQB=0.794945;DP=2456;DP4=1162,1219,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.93764e-07;MQSB=0.991808;RPB=0.958256;SGB=43.2083;VDB=0.236831;EFF=INTRON(MODIFIER||||254|LOC_Os09g29540|protein_coding|CODING|LOC_Os09g29540.1|2|1) FN689-S.SNP.9:17972799 chr09:017972799 0 W/17972799-17972799 FN689-S Single Base Substitution A-T INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3287-S.SNP.9:17975203 chr09:017975203 0 W/17975203-17975203 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.980017;DP=3088;DP4=1186,1756,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40956e-11;MQSB=0.653492;RPB=0.809752;SGB=67.4439;VDB=0.89743;EFF=INTERGENIC(MODIFIER||||||||||1) FN1660-S.SNP.9:17975533 chr09:017975533 0 W/17975533-17975533 FN1660-S Single Base Substitution T-G INTERGENIC HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3787-S.SNP.9:17975894 chr09:017975894 0 W/17975894-17975894 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.894311;DP=2618;DP4=1331,1191,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36301e-07;MQSB=0.986135;RPB=0.885973;SGB=44.5415;VDB=0.510754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.9:17978389 chr09:017978389 0 W/17978389-17978389 FN1065-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g29560 OsWAK83 - OsWAK pseudogene, expressed SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2676-S.SNP.9:17981399 chr09:017981399 0 W/17981399-17981399 FN2676-S SNP C -> A AC=1;AN=200;BQB=0.608873;DP=4415;DP4=2195,1993,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.94598e-10;MQSB=0.982759;RPB=0.865921;SGB=32.0901;VDB=0.614059;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.9:17982805 chr09:017982805 0 W/17982805-17982805 FN1446-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g29570 expressed protein SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2288.SNP.9:17982924 chr09:017982924 0 W/17982924-17982924 FN2288 SNP C -> T AC=2;AN=192;BQB=0.288428;DP=4603;DP4=1964,2219,11,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.64779e-18;MQSB=0.124899;RPB=0.930385;SGB=114.631;VDB=0.964121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R95W|108|LOC_Os09g29570|protein_coding|CODING|LOC_Os09g29570.1|2|1) FN1272-S.SNP.9:17997157 chr09:017997157 0 W/17997157-17997157 FN1272-S Single Base Substitution C-G INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1753-S.SNP.9:17997398 chr09:017997398 0 W/17997398-17997398 FN1753-S SNP A -> G AC=1;AN=188;BQB=0.5023;DP=4359;DP4=2348,1959,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.76603e-11;MQSB=0.952493;RPB=0.652306;SGB=89.1337;VDB=0.57635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.9:17997457 chr09:017997457 0 W/17997457-17997457 FN2533-S SNP G -> A AC=1;AN=198;BQB=0.987834;DP=4267;DP4=2215,1624,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.78846e-06;MQSB=0.797695;RPB=0.955559;SGB=29.3637;VDB=0.836722;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.9:18006589 chr09:018006589 0 W/18006589-18006589 FN836-S Single Base Substitution T-C INTRON HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-50.SNP.9:18007372 chr09:018007372 0 W/18007372-18007372 FN-50 Single Base Substitution C-T INTRON Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN3678-S.SNP.9:18028171 chr09:018028171 0 W/18028171-18028171 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.999017;DP=2876;DP4=1303,1464,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.03814e-06;MQSB=0.999591;RPB=0.347596;SGB=32.5467;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.9:18029629 chr09:018029629 0 W/18029629-18029629 FN-341 Single Base Substitution C-T INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. W427-1-1.SNP.9:18030948 chr09:018030948 0 W/18030948-18030948 W427-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3319-S.SNP.9:18032127 chr09:018032127 0 W/18032127-18032127 FN3319-S SNP G -> T AC=1;AN=184;BQB=0.995841;DP=3554;DP4=1367,2061,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03582e-09;MQSB=0.771694;RPB=0.716839;SGB=49.835;VDB=0.872144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.9:18032789 chr09:018032789 0 W/18032789-18032789 FN1762-S SNP C -> G AC=1;AN=188;BQB=0.462004;DP=3886;DP4=2152,1710,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.72679e-06;MQSB=0.952941;RPB=0.995897;SGB=-16.0863;VDB=0.0763255;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.9:18045196 chr09:018045196 0 W/18045196-18045196 FN499-S Single Base Substitution T-C INTRON HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1086-S.SNP.9:18052310 chr09:018052310 0 W/18052310-18052310 FN1086-S Single Base Substitution A-C INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN973-S.SNP.9:18055128 chr09:018055128 0 W/18055128-18055128 FN973-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g29680 expressed protein SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN1438-S.SNP.9:18060472 chr09:018060472 0 W/18060472-18060472 FN1438-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g29700 retrotransposon protein, putative, unclassified, expressed SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN-345.SNP.9:18061609 chr09:018061609 0 W/18061609-18061609 FN-345 Single Base Substitution C-G INTRON HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-345.SNP.9:18061610 chr09:018061610 0 W/18061610-18061610 FN-345 Single Base Substitution C-T INTRON HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2618-S.SNP.9:18061832 chr09:018061832 0 W/18061832-18061832 FN2618-S SNP T -> A AC=2;AN=198;BQB=0.942596;DP=4231;DP4=2065,1907,31,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.46705e-35;MQSB=0.646803;RPB=0.610383;SGB=166.972;VDB=0.977167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H484Q|1016|LOC_Os09g29700|protein_coding|CODING|LOC_Os09g29700.1|5|1) FN895-S.SNP.9:18065239 chr09:018065239 0 W/18065239-18065239 FN895-S Single Base Substitution G-A INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN3385-S.SNP.9:18066590 chr09:018066590 0 W/18066590-18066590 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.882116;DP=3521;DP4=1849,1538,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48549e-08;MQSB=0.908874;RPB=0.465864;SGB=28.3187;VDB=0.911372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.9:18072273 chr09:018072273 0 W/18072273-18072273 FN2331 SNP C -> T AC=1;AN=192;BQB=0.42299;DP=5402;DP4=2533,2544,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0855239;MQB=0.0915205;MQSB=9.76063e-16;RPB=0.604994;SGB=36.2157;VDB=0.178826;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R56|924|LOC_Os09g29720|protein_coding|CODING|LOC_Os09g29720.1|1|1) FN809-S.SNP.9:18091306 chr09:018091306 0 W/18091306-18091306 FN809-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g29760 expressed protein SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2107-S.SNP.9:18096429 chr09:018096429 0 W/18096429-18096429 FN2107-S SNP C -> A AC=1;AN=168;BQB=0.992776;DP=3985;DP4=1922,2016,11,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.72061e-12;MQSB=0.895995;RPB=0.767379;SGB=-43.4892;VDB=0.883998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.9:18098001 chr09:018098001 0 W/18098001-18098001 FN1210-S Single Base Substitution A-T INTRON HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN1577-S.SNP.9:18101066 chr09:018101066 0 W/18101066-18101066 FN1577-S Single Base Substitution C-T INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1577-S.SNP.9:18101068 chr09:018101068 0 W/18101068-18101068 FN1577-S Single Base Substitution C-G INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2385.SNP.9:18110338 chr09:018110338 0 W/18110338-18110338 FN2385 SNP G -> A AC=1;AN=192;BQB=0.921456;DP=5425;DP4=2510,2603,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91529e-16;MQSB=0.960716;RPB=0.888485;SGB=72.5078;VDB=0.653789;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.9:18123794 chr09:018123794 0 W/18123794-18123794 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.887344;DP=2697;DP4=1469,1118,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07013e-07;MQSB=0.991441;RPB=0.215061;SGB=62.3078;VDB=0.00974813;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.9:18124083 chr09:018124083 0 W/18124083-18124083 FN-174 Single Base Substitution G-C INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1585-S.SNP.9:18126651 chr09:018126651 0 W/18126651-18126651 FN1585-S Single Base Substitution G-A INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN4305-S.SNP.9:18131124 chr09:018131124 0 W/18131124-18131124 FN4305-S SNP C -> T AC=2;AN=170;BQB=0.975697;DP=2443;DP4=1129,1128,19,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.06162e-19;MQSB=0.752827;RPB=0.948506;SGB=76.0649;VDB=0.781742;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.9:18137068 chr09:018137068 0 W/18137068-18137068 FN2108-S SNP C -> T AC=1;AN=168;BQB=0.0260665;DP=4472;DP4=2268,2165,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.11526e-07;MQSB=0.997208;RPB=0.533506;SGB=-71.2065;VDB=0.249228;EFF=INTERGENIC(MODIFIER||||||||||1) FN3690-S.SNP.9:18143352 chr09:018143352 0 W/18143352-18143352 FN3690-S SNP C -> A AC=1;AN=190;BQB=0.963569;DP=2699;DP4=1407,1185,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000120043;MQSB=0.999997;RPB=0.959945;SGB=25.439;VDB=0.397567;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S366|451|LOC_Os09g29830|protein_coding|CODING|LOC_Os09g29830.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S343|429|LOC_Os09g29830|protein_coding|CODING|LOC_Os09g29830.2|6|1),SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S343|428|LOC_Os09g29830|protein_coding|CODING|LOC_Os09g29830.3|6|1) FN3839-S.SNP.9:18145402 chr09:018145402 0 W/18145402-18145402 FN3839-S SNP A -> C AC=1;AN=190;BQB=0.117966;DP=3540;DP4=1602,1720,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.56454e-07;MQSB=0.909555;RPB=0.676239;SGB=36.4291;VDB=0.450479;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.9:18157365 chr09:018157365 0 W/18157365-18157365 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.96532;DP=2980;DP4=1303,1537,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47726e-07;MQSB=0.989059;RPB=0.995601;SGB=61.0344;VDB=0.835093;EFF=INTRON(MODIFIER||||272|LOC_Os09g29850|protein_coding|CODING|LOC_Os09g29850.1|1|1) FN2237-S.SNP.9:18161798 chr09:018161798 0 W/18161798-18161798 FN2237-S SNP A -> G AC=1;AN=190;BQB=0.999024;DP=4889;DP4=2398,2295,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00780712;MQSB=0.173041;RPB=0.352434;SGB=26.3271;VDB=0.402545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1610-S.SNP.9:18162875 chr09:018162875 0 W/18162875-18162875 FN1610-S Single Base Substitution C-T INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2321.SNP.9:18165393 chr09:018165393 0 W/18165393-18165393 FN2321 SNP G -> A AC=1;AN=192;BQB=0.302968;DP=5596;DP4=2494,2717,8,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.14535e-13;MQSB=0.617409;RPB=0.295529;SGB=-175.228;VDB=0.972194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.9:18165567 chr09:018165567 0 W/18165567-18165567 FN2544-S SNP A -> G AC=2;AN=198;BQB=0.703207;DP=4460;DP4=2093,1905,19,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00044843;MQB=4.86044e-18;MQSB=0.940032;RPB=0.984785;SGB=155.237;VDB=0.0171294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2245-S.SNP.9:18185860 chr09:018185860 0 W/18185860-18185860 FN2245-S SNP C -> T AC=2;AN=190;BQB=0.0156407;DP=3428;DP4=1381,1585,7,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000291715;MQB=1.90184e-05;MQSB=0.00436468;RPB=0.762307;SGB=67.3108;VDB=0.00807787;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.9:18191703 chr09:018191703 0 W/18191703-18191703 FN-279 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-279.SNP.9:18194137 chr09:018194137 0 W/18194137-18194137 FN-279 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g29920 retrotransposon protein, putative, unclassified, expressed SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN_N1-130-1.SNP.9:18194320 chr09:018194320 0 W/18194320-18194320 FN_N1-130-1 Single Base Substitution C-T HET LOC_Os09g29920 retrotransposon protein, putative, unclassified, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3465-S.SNP.9:18219780 chr09:018219780 0 W/18219780-18219780 FN3465-S SNP A -> G AC=1;AN=184;BQB=0.983637;DP=2542;DP4=1334,1100,15,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.27158e-16;MQSB=0.999673;RPB=0.801095;SGB=116.569;VDB=0.87438;EFF=INTRON(MODIFIER||||512|LOC_Os09g29940|protein_coding|CODING|LOC_Os09g29940.1|3|1),INTRON(MODIFIER||||271|LOC_Os09g29940|protein_coding|CODING|LOC_Os09g29940.2|3|1) FN1023-S.SNP.9:18221455 chr09:018221455 0 W/18221455-18221455 FN1023-S Single Base Substitution C-T INTERGENIC HOMO SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN1572-S.SNP.9:18228192 chr09:018228192 0 W/18228192-18228192 FN1572-S Single Base Substitution C-T INTRON HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN872-S.SNP.9:18233338 chr09:018233338 0 W/18233338-18233338 FN872-S Single Base Substitution G-A INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1202-S.SNP.9:18233731 chr09:018233731 0 W/18233731-18233731 FN1202-S Single Base Substitution A-G INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN4153-S.SNP.9:18234238 chr09:018234238 0 W/18234238-18234238 FN4153-S SNP T -> G AC=2;AN=170;BQB=0.93666;DP=2684;DP4=1041,1490,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.77733e-12;MQSB=0.929854;RPB=0.724451;SGB=62.4192;VDB=0.920807;EFF=INTERGENIC(MODIFIER||||||||||1) FN871-S.SNP.9:18245191 chr09:018245191 0 W/18245191-18245191 FN871-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g29980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2609-S.SNP.9:18245442 chr09:018245442 0 W/18245442-18245442 FN2609-S SNP T -> A AC=2;AN=198;BQB=0.452616;DP=3612;DP4=1909,1285,26,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.7456e-24;MQSB=0.733853;RPB=0.999998;SGB=70.5469;VDB=0.379541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-55.SNP.9:18251466 chr09:018251466 0 W/18251466-18251466 FN-55 Single Base Substitution G-A INTERGENIC HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN2374.SNP.9:18252010 chr09:018252010 0 W/18252010-18252010 FN2374 SNP G -> A AC=1;AN=192;BQB=0.900935;DP=5038;DP4=2414,2355,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000790544;MQSB=0.924952;RPB=0.578516;SGB=21.9585;VDB=0.439579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3430-S.SNP.9:18258167 chr09:018258167 0 W/18258167-18258167 FN3430-S SNP G -> C AC=1;AN=184;BQB=0.999853;DP=3480;DP4=1892,1419,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.7575e-05;MQSB=0.428823;RPB=0.796288;SGB=25.1826;VDB=0.678333;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acC|T146|273|LOC_Os09g30010|protein_coding|CODING|LOC_Os09g30010.1|1|1) FN3431-S.SNP.9:18258533 chr09:018258533 0 W/18258533-18258533 FN3431-S SNP G -> A AC=1;AN=184;BQB=0.85673;DP=3079;DP4=1154,1784,1,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.56875e-07;MQSB=0.952739;RPB=0.102479;SGB=28.7043;VDB=0.712308;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M268I|273|LOC_Os09g30010|protein_coding|CODING|LOC_Os09g30010.1|1|1) FN-258.SNP.9:18264546 chr09:018264546 0 W/18264546-18264546 FN-258 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os09g30020 retrotransposon protein, putative, unclassified, expressed SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-258.SNP.9:18264549 chr09:018264549 0 W/18264549-18264549 FN-258 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g30020 retrotransposon protein, putative, unclassified, expressed SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2374.SNP.9:18266196 chr09:018266196 0 W/18266196-18266196 FN2374 SNP G -> A AC=1;AN=192;BQB=0.833227;DP=4694;DP4=2263,2115,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.73239e-08;MQSB=0.916032;RPB=0.805712;SGB=36.2157;VDB=0.00940584;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H530|1589|LOC_Os09g30020|protein_coding|CODING|LOC_Os09g30020.1|3|1) FN681-S.SNP.9:18270369 chr09:018270369 0 W/18270369-18270369 FN681-S Single Base Substitution A-T INTERGENIC HOMO SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2085-S.SNP.9:18271155 chr09:018271155 0 W/18271155-18271155 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.177179;DP=4200;DP4=2273,1886,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.68301e-08;MQSB=0.995273;RPB=0.7665;SGB=-159.481;VDB=0.401264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.9:18279593 chr09:018279593 0 W/18279593-18279593 FN2474 SNP G -> A AC=1;AN=200;BQB=0.17688;DP=3556;DP4=1450,1576,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36315e-09;MQSB=0.0587143;RPB=0.418128;SGB=39.9056;VDB=0.0439555;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A14|208|LOC_Os09g30060|protein_coding|CODING|LOC_Os09g30060.1|1|1) FN1261-S.SNP.9:18281165 chr09:018281165 0 W/18281165-18281165 FN1261-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2378.SNP.9:18290620 chr09:018290620 0 W/18290620-18290620 FN2378 SNP T -> C AC=1;AN=192;BQB=0.956613;DP=5035;DP4=1992,2691,12,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.48995e-17;MQSB=0.964509;RPB=0.411697;SGB=64.8148;VDB=0.758395;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.9:18291888 chr09:018291888 0 W/18291888-18291888 FN517-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2310.SNP.9:18299845 chr09:018299845 0 W/18299845-18299845 FN2310 SNP T -> C AC=1;AN=192;BQB=0.972896;DP=5189;DP4=2383,2518,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08539e-09;MQSB=0.928688;RPB=0.99688;SGB=28.9139;VDB=0.508404;EFF=INTRON(MODIFIER||||542|LOC_Os09g30100|protein_coding|CODING|LOC_Os09g30100.1|18|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||408|LOC_Os09g30100|protein_coding|CODING|LOC_Os09g30100.2|16|1) FN982-S.SNP.9:18308614 chr09:018308614 0 W/18308614-18308614 FN982-S Single Base Substitution A-G INTRON HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN-396.SNP.9:18318986 chr09:018318986 0 W/18318986-18318986 FN-396 Single Base Substitution A-T INTRON HET SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN-134.SNP.9:18321542 chr09:018321542 0 W/18321542-18321542 FN-134 Single Base Substitution G-T INTERGENIC HOMO SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2247-S.SNP.9:18326956 chr09:018326956 0 W/18326956-18326956 FN2247-S SNP G -> A AC=1;AN=190;BQB=0.997111;DP=3682;DP4=1619,1842,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.67557e-06;MQSB=0.959881;RPB=0.753311;SGB=28.9929;VDB=0.273442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.9:18328613 chr09:018328613 0 W/18328613-18328613 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.992406;DP=3265;DP4=1848,1335,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.77288e-10;MQSB=0.996854;RPB=0.541347;SGB=43.0708;VDB=0.731125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.9:18333646 chr09:018333646 0 W/18333646-18333646 FN2376 SNP T -> C AC=1;AN=192;BQB=0.204146;DP=5449;DP4=2275,2978,7,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.68327e-12;MQSB=0.90568;RPB=0.931319;SGB=68.2948;VDB=0.216681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.9:18336102 chr09:018336102 0 W/18336102-18336102 FN2584-S SNP G -> T AC=1;AN=198;BQB=0.986833;DP=4456;DP4=2047,2080,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.17937e-15;MQSB=0.341599;RPB=0.442707;SGB=57.8907;VDB=0.706217;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.9:18337754 chr09:018337754 0 W/18337754-18337754 FN4155-S SNP C -> T AC=1;AN=170;BQB=0.916163;DP=2677;DP4=1170,1436,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.33286e-12;MQSB=0.998695;RPB=0.904542;SGB=55.5339;VDB=0.813434;EFF=INTERGENIC(MODIFIER||||||||||1) FN427-S.SNP.9:18340133 chr09:018340133 0 W/18340133-18340133 FN427-S Single Base Substitution C-A INTRON HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1200-S.SNP.9:18353547 chr09:018353547 0 W/18353547-18353547 FN1200-S Single Base Substitution G-A INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3848-S.SNP.9:18357726 chr09:018357726 0 W/18357726-18357726 FN3848-S SNP T -> A AC=1;AN=158;BQB=0.923855;DP=2331;DP4=949,1269,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.66988e-08;MQSB=0.926716;RPB=0.963307;SGB=40.8124;VDB=0.0808119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.9:18359676 chr09:018359676 0 W/18359676-18359676 FN3872-S SNP C -> T AC=1;AN=158;BQB=0.877454;DP=2492;DP4=1134,1265,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.74488e-08;MQSB=0.645828;RPB=0.837076;SGB=16.7104;VDB=0.453757;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.9:18359896 chr09:018359896 0 W/18359896-18359896 FN1330-S Single Base Substitution G-A INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2298.SNP.9:18362788 chr09:018362788 0 W/18362788-18362788 FN2298 SNP G -> A AC=1;AN=192;BQB=0.57552;DP=5146;DP4=2517,2371,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.72514e-07;MQSB=0.991195;RPB=0.998688;SGB=23.7852;VDB=0.384463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M362I|378|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.1|3|1),UTR_3_PRIME(MODIFIER||254||340|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.3|3|1),UTR_3_PRIME(MODIFIER||254||340|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.2|3|1) FN2790-S.SNP.9:18362967 chr09:018362967 0 W/18362967-18362967 FN2790-S SNP C -> T AC=2;AN=198;BQB=0.912716;DP=4247;DP4=1990,1972,20,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.8807e-22;MQSB=0.578748;RPB=0.0753221;SGB=137.217;VDB=0.422775;EFF=UTR_3_PRIME(MODIFIER||433||340|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.3|3|1),UTR_3_PRIME(MODIFIER||433||340|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.2|3|1),INTRON(MODIFIER||||378|LOC_Os09g30170|protein_coding|CODING|LOC_Os09g30170.1|3|1) FN781-S.SNP.9:18367608 chr09:018367608 0 W/18367608-18367608 FN781-S Single Base Substitution C-A INTRON HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN912-S.SNP.9:18369318 chr09:018369318 0 W/18369318-18369318 FN912-S Single Base Substitution A-T INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN1036-S.SNP.9:18377609 chr09:018377609 0 W/18377609-18377609 FN1036-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g30190 receptor-like protein kinase 2 precursor, putative, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN3555-S.SNP.9:18384009 chr09:018384009 0 W/18384009-18384009 FN3555-S SNP G -> C AC=1;AN=188;BQB=0.983738;DP=2737;DP4=1294,1389,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.0652e-08;MQSB=0.999845;RPB=0.796156;SGB=53.5223;VDB=0.354017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aCc|S438T|470|LOC_Os09g30200|protein_coding|CODING|LOC_Os09g30200.1|3|1) FN1346-S.SNP.9:18385450 chr09:018385450 0 W/18385450-18385450 FN1346-S Single Base Substitution A-G INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3711-S.SNP.9:18409690 chr09:018409690 0 W/18409690-18409690 FN3711-S SNP T -> C AC=1;AN=190;BQB=0.617545;DP=2703;DP4=1202,1402,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.49503e-07;MQSB=0.835955;RPB=0.937907;SGB=39.6545;VDB=0.72876;EFF=INTERGENIC(MODIFIER||||||||||1) FN672-S.SNP.9:18417046 chr09:018417046 0 W/18417046-18417046 FN672-S Single Base Substitution A-T INTRON HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN2594-S.SNP.9:18437206 chr09:018437206 0 W/18437206-18437206 FN2594-S SNP T -> C AC=1;AN=198;BQB=0.958617;DP=4536;DP4=1903,2336,11,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.01496e-09;MQSB=0.798211;RPB=0.9982;SGB=63.3342;VDB=0.816693;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.9:18438326 chr09:018438326 0 W/18438326-18438326 FN2247-S SNP C -> T AC=2;AN=190;BQB=0.999151;DP=4750;DP4=2274,2052,25,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000210526;MQB=5.40305e-26;MQSB=0.277769;RPB=0.969614;SGB=1.7327;VDB=0.428486;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.9:18438327 chr09:018438327 0 W/18438327-18438327 FN2247-S SNP C -> T AC=2;AN=190;BQB=0.994105;DP=4751;DP4=2272,2048,22,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000420964;MQB=1.45901e-25;MQSB=0.31024;RPB=0.771255;SGB=-48.3698;VDB=0.514674;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.9:18439743 chr09:018439743 0 W/18439743-18439743 FN4020-S SNP T -> G AC=1;AN=168;BQB=0.999473;DP=2579;DP4=1105,1294,8,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.20319e-11;MQSB=0.995949;RPB=0.980214;SGB=39.2004;VDB=0.807885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3983-S.SNP.9:18446327 chr09:018446327 0 W/18446327-18446327 FN3983-S SNP A -> T AC=1;AN=168;BQB=0.862714;DP=2550;DP4=1298,1140,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.39644e-08;MQSB=0.852138;RPB=0.416426;SGB=34.748;VDB=0.45831;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.9:18463189 chr09:018463189 0 W/18463189-18463189 FN1234-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN526-S.SNP.9:18465678 chr09:018465678 0 W/18465678-18465678 FN526-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1576-S.SNP.9:18469751 chr09:018469751 0 W/18469751-18469751 FN1576-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1576-S.SNP.9:18471943 chr09:018471943 0 W/18471943-18471943 FN1576-S Single Base Substitution A-G INTRON HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1576-S.SNP.9:18471944 chr09:018471944 0 W/18471944-18471944 FN1576-S Single Base Substitution C-A INTRON HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2575-S.SNP.9:18472137 chr09:018472137 0 W/18472137-18472137 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.373201;DP=4436;DP4=2048,2121,11,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.78752e-20;MQSB=0.935326;RPB=0.273414;SGB=65.676;VDB=0.000904409;EFF=INTRON(MODIFIER||||573|LOC_Os09g30350|protein_coding|CODING|LOC_Os09g30350.1|1|1) FN2575-S.SNP.9:18472138 chr09:018472138 0 W/18472138-18472138 FN2575-S SNP A -> T AC=1;AN=198;BQB=0.888608;DP=4444;DP4=2072,1871,10,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.8169e-21;MQSB=0.951532;RPB=0.202759;SGB=33.2762;VDB=0.00163988;EFF=INTRON(MODIFIER||||573|LOC_Os09g30350|protein_coding|CODING|LOC_Os09g30350.1|1|1) FN449-S.SNP.9:18474927 chr09:018474927 0 W/18474927-18474927 FN449-S Single Base Substitution G-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN2288.SNP.9:18478208 chr09:018478208 0 W/18478208-18478208 FN2288 SNP G -> C AC=1;AN=192;BQB=0.796843;DP=1821;DP4=647,793,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=17;MQ0F=0.304228;MQB=0.206156;MQSB=3.20219e-34;RPB=0.386554;SGB=53.7748;VDB=0.106715;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.9:18496473 chr09:018496473 0 W/18496473-18496473 FN_546-3-1 Single Base Substitution C-A Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN591-S.SNP.9:18499379 chr09:018499379 0 W/18499379-18499379 FN591-S Single Base Substitution A-G INTRON HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2475.SNP.9:18499387 chr09:018499387 0 W/18499387-18499387 FN2475 SNP A -> T AC=2;AN=200;BQB=0.980873;DP=4911;DP4=2256,2400,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17609e-26;MQSB=0.968499;RPB=0.389662;SGB=137.609;VDB=0.00395429;EFF=INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.1|2|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.2|1|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.3|2|1) FN2475.SNP.9:18499388 chr09:018499388 0 W/18499388-18499388 FN2475 SNP G -> T AC=2;AN=200;BQB=0.982982;DP=4900;DP4=2216,2388,16,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.05515e-25;MQSB=0.96317;RPB=0.421533;SGB=173.999;VDB=0.0184289;EFF=INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.1|2|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.2|1|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.3|2|1) FN2475.SNP.9:18499389 chr09:018499389 0 W/18499389-18499389 FN2475 SNP A -> T AC=2;AN=200;BQB=0.25288;DP=4885;DP4=2214,2323,16,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.76775e-27;MQSB=0.970898;RPB=0.316675;SGB=137.609;VDB=0.00647267;EFF=INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.1|2|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.2|1|1),INTRON(MODIFIER||||633|LOC_Os09g30400|protein_coding|CODING|LOC_Os09g30400.3|2|1) FN948-S.SNP.9:18500028 chr09:018500028 0 W/18500028-18500028 FN948-S Single Base Substitution A-T INTRON HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN948-S.SNP.9:18500029 chr09:018500029 0 W/18500029-18500029 FN948-S Single Base Substitution C-T INTRON HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN709-S.SNP.9:18500284 chr09:018500284 0 W/18500284-18500284 FN709-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN709-S.SNP.9:18500352 chr09:018500352 0 W/18500352-18500352 FN709-S Single Base Substitution A-T START_GAINED HET LOC_Os09g30400 WRKY90, expressed SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN709-S.SNP.9:18500378 chr09:018500378 0 W/18500378-18500378 FN709-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN2306.SNP.9:18504681 chr09:018504681 0 W/18504681-18504681 FN2306 SNP T -> C AC=1;AN=192;BQB=0.276014;DP=4988;DP4=2234,2442,2,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.79965e-05;MQSB=0.930507;RPB=0.817306;SGB=30.9536;VDB=0.114068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.9:18507200 chr09:018507200 0 W/18507200-18507200 FN3810-S SNP A -> C AC=1;AN=190;BQB=0.782625;DP=2683;DP4=1267,1312,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20698e-06;MQSB=0.873396;RPB=0.089321;SGB=36.1006;VDB=0.339188;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.9:18515298 chr09:018515298 0 W/18515298-18515298 FN4083-S SNP T -> A AC=1;AN=182;BQB=0.993727;DP=2882;DP4=1335,1453,7,20;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0263706;MQB=0.11073;MQSB=3.57196e-05;RPB=0.526738;SGB=84.7797;VDB=0.404043;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K588*|699|LOC_Os09g30412|protein_coding|CODING|LOC_Os09g30412.1|3|1) FN1123-S.SNP.9:18543292 chr09:018543292 0 W/18543292-18543292 FN1123-S Single Base Substitution G-A INTERGENIC HET SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN798-S.SNP.9:18548293 chr09:018548293 0 W/18548293-18548293 FN798-S Single Base Substitution C-T INTRON HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN971-S.SNP.9:18553903 chr09:018553903 0 W/18553903-18553903 FN971-S Single Base Substitution A-G INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3439-S.SNP.9:18554046 chr09:018554046 0 W/18554046-18554046 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.450898;DP=2573;DP4=1285,1108,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000388651;MQB=0.000430069;MQSB=0.354452;RPB=0.999631;SGB=25.1826;VDB=0.947685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.9:18560293 chr09:018560293 0 W/18560293-18560293 FN3598-S SNP C -> G AC=1;AN=188;BQB=0.984092;DP=2968;DP4=1180,1722,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.53856e-11;MQSB=0.979273;RPB=0.999113;SGB=71.6954;VDB=0.766477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E431Q|810|LOC_Os09g30458|protein_coding|CODING|LOC_Os09g30458.1|5|1) FN-143.SNP.9:18573040 chr09:018573040 0 W/18573040-18573040 FN-143 Single Base Substitution G-C INTRON HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3306-S.SNP.9:18574205 chr09:018574205 0 W/18574205-18574205 FN3306-S SNP A -> G AC=1;AN=184;BQB=0.98747;DP=3547;DP4=1709,1631,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.47296e-08;MQSB=0.602834;RPB=0.996496;SGB=28.3187;VDB=0.747647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.9:18575219 chr09:018575219 0 W/18575219-18575219 FN3902-S SNP G -> C AC=1;AN=158;BQB=0.633418;DP=1566;DP4=704,693,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.0048269;MQSB=0.936264;RPB=0.991275;SGB=9.60207;VDB=0.806617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.9:18575906 chr09:018575906 0 W/18575906-18575906 FN-344 Single Base Substitution C-T INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3692-S.SNP.9:18578102 chr09:018578102 0 W/18578102-18578102 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.746911;DP=2811;DP4=1289,1410,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29038e-06;MQSB=0.960806;RPB=0.872701;SGB=28.9929;VDB=0.3365;EFF=INTRON(MODIFIER||||318|LOC_Os09g30478|protein_coding|CODING|LOC_Os09g30478.1|4|1) FN425-S.SNP.9:18578924 chr09:018578924 0 W/18578924-18578924 FN425-S Single Base Substitution T-G INTRON HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN989-S.SNP.9:18584204 chr09:018584204 0 W/18584204-18584204 FN989-S Single Base Substitution A-T INTERGENIC HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3495-S.SNP.9:18585360 chr09:018585360 0 W/18585360-18585360 FN3495-S SNP C -> G AC=2;AN=188;BQB=0.905214;DP=2513;DP4=1391,1038,13,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.13656e-12;MQSB=0.995946;RPB=0.0395115;SGB=60.7873;VDB=0.359085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.9:18589062 chr09:018589062 0 W/18589062-18589062 FN3592-S SNP A -> G AC=2;AN=188;BQB=0.933047;DP=3182;DP4=1542,1474,18,19;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0087995;MQB=4.16197e-07;MQSB=0.00939732;RPB=0.405838;SGB=-3.59057;VDB=0.920462;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.9:18589761 chr09:018589761 0 W/18589761-18589761 FN2661-S SNP G -> T AC=1;AN=200;BQB=0.554249;DP=4851;DP4=2339,2244,12,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.002886;MQB=4.45461e-13;MQSB=0.501932;RPB=0.792865;SGB=95.7111;VDB=0.288065;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.9:18589762 chr09:018589762 0 W/18589762-18589762 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.683269;DP=4872;DP4=2381,2175,13,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00287356;MQB=1.89307e-13;MQSB=0.421965;RPB=0.805075;SGB=100.316;VDB=0.196433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.9:18593617 chr09:018593617 0 W/18593617-18593617 FN1625-S Single Base Substitution G-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:18593617 chr09:018593617 0 W/18593617-18593617 FN1626-S SNP G -> A AC=2;AN=188;BQB=0.970714;DP=1741;DP4=749,953,7,14;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=4.67841e-10;MQSB=0.607585;RPB=0.938186;SGB=13.2547;VDB=0.294685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.9:18593618 chr09:018593618 0 W/18593618-18593618 FN1625-S Single Base Substitution G-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.9:18593618 chr09:018593618 0 W/18593618-18593618 FN1626-S SNP G -> A AC=2;AN=188;BQB=0.887393;DP=1738;DP4=744,953,9,11;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=2.66177e-09;MQSB=0.606012;RPB=0.822276;SGB=36.2493;VDB=0.384373;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.9:18595920 chr09:018595920 0 W/18595920-18595920 FN778-S Single Base Substitution C-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3670-S.SNP.9:18597641 chr09:018597641 0 W/18597641-18597641 FN3670-S SNP C -> T AC=1;AN=190;BQB=0.80526;DP=2894;DP4=1546,1264,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.09359e-07;MQSB=0.0739745;RPB=0.512412;SGB=46.7622;VDB=0.788664;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.9:18597862 chr09:018597862 0 W/18597862-18597862 FN3944-S SNP C -> T AC=1;AN=168;BQB=0.98518;DP=2623;DP4=1268,1237,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.18452e-05;MQSB=0.00269085;RPB=0.838728;SGB=31.3172;VDB=0.488444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.9:18601749 chr09:018601749 0 W/18601749-18601749 FN3923-S SNP T -> C AC=1;AN=158;BQB=0.802236;DP=2600;DP4=1091,1260,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00615385;MQB=0.0487983;MQSB=6.88913e-27;RPB=0.771411;SGB=33.9591;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN2442.SNP.9:18603284 chr09:018603284 0 W/18603284-18603284 FN2442 SNP C -> G AC=2;AN=200;BQB=0.351801;DP=2551;DP4=863,1336,9,14;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00823207;MQB=0.000174645;MQSB=1.77764e-22;RPB=0.868787;SGB=72.7161;VDB=0.090834;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.9:18604632 chr09:018604632 0 W/18604632-18604632 FN1514-S Single Base Substitution G-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3389-S.SNP.9:18605030 chr09:018605030 0 W/18605030-18605030 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.0823453;DP=2707;DP4=1263,1342,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00078706;MQSB=0.0291695;RPB=0.805848;SGB=56.8786;VDB=0.889657;EFF=INTERGENIC(MODIFIER||||||||||1) FN539-S.SNP.9:18614683 chr09:018614683 0 W/18614683-18614683 FN539-S Single Base Substitution T-A INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2260-S.SNP.9:18618317 chr09:018618317 0 W/18618317-18618317 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.278525;DP=3714;DP4=1726,1653,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.57022e-09;MQSB=0.566061;RPB=0.492115;SGB=31.3213;VDB=0.123825;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A69|137|LOC_Os09g30490|protein_coding|CODING|LOC_Os09g30490.1|1|1) FN476-S.SNP.9:18621236 chr09:018621236 0 W/18621236-18621236 FN476-S Single Base Substitution C-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN476-S.SNP.9:18621238 chr09:018621238 0 W/18621238-18621238 FN476-S Single Base Substitution G-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3867-S.SNP.9:18623483 chr09:018623483 0 W/18623483-18623483 FN3867-S SNP T -> C AC=2;AN=158;BQB=0.999899;DP=2914;DP4=1145,1504,1,18;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0.110501;MQB=0.341137;MQSB=0;RPB=0.0808018;SGB=54.2901;VDB=0.00164908;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.9:18623490 chr09:018623490 0 W/18623490-18623490 FN3867-S SNP C -> G AC=2;AN=158;BQB=0.875648;DP=2880;DP4=1205,1513,0,19;HOB=0.024996;ICB=0.493752;MQ=32;MQ0F=0.106597;MQB=0.337842;MQSB=0;RPB=0.224145;SGB=30.927;VDB=0.0261257;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.9:18624055 chr09:018624055 0 W/18624055-18624055 FN669-S Single Base Substitution C-A INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3867-S.SNP.9:18625592 chr09:018625592 0 W/18625592-18625592 FN3867-S SNP T -> C AC=2;AN=158;BQB=0.432332;DP=2340;DP4=1188,1040,13,1;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.000854701;MQB=5.46458e-08;MQSB=0.0323896;RPB=0.44692;SGB=19.0798;VDB=0.973843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.9:18625718 chr09:018625718 0 W/18625718-18625718 FN3867-S SNP T -> C AC=2;AN=158;BQB=0.422958;DP=2614;DP4=1190,1320,15,1;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.000382555;MQB=6.21646e-08;MQSB=0.0298012;RPB=0.585702;SGB=44.1818;VDB=0.389411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.9:18630776 chr09:018630776 0 W/18630776-18630776 FN2577-S SNP C -> G AC=1;AN=198;BQB=0.661644;DP=4583;DP4=2429,1908,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.22758;MQB=0.987605;MQSB=0;RPB=0.989927;SGB=26.7492;VDB=0.212649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D1333E|1570|LOC_Os09g30494|protein_coding|CODING|LOC_Os09g30494.1|3|1) FN432-S.SNP.9:18636154 chr09:018636154 0 W/18636154-18636154 FN432-S Single Base Substitution A-G INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2721-S.SNP.9:18643267 chr09:018643267 0 W/18643267-18643267 FN2721-S SNP T -> C AC=1;AN=200;BQB=0.126701;DP=4516;DP4=1872,2248,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.45996e-12;MQSB=0.922322;RPB=0.720169;SGB=77.2904;VDB=0.522834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E208G|271|LOC_Os09g30510|protein_coding|CODING|LOC_Os09g30510.1|1|1) FN2213-S.SNP.9:18645249 chr09:018645249 0 W/18645249-18645249 FN2213-S SNP T -> C AC=1;AN=190;BQB=0.525754;DP=4925;DP4=2346,2286,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.56765e-12;MQSB=0.625577;RPB=0.988471;SGB=68.0854;VDB=0.537656;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.9:18646917 chr09:018646917 0 W/18646917-18646917 FN631-S Single Base Substitution G-A INTERGENIC HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2637-S.SNP.9:18647927 chr09:018647927 0 W/18647927-18647927 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.788912;DP=4760;DP4=2318,2025,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64852e-11;MQSB=0.657135;RPB=0.917024;SGB=72.6852;VDB=0.963964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.9:18651616 chr09:018651616 0 W/18651616-18651616 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.660156;DP=3106;DP4=1457,1544,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21007e-08;MQSB=0.991249;RPB=0.997731;SGB=50.3161;VDB=0.915797;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.9:18653570 chr09:018653570 0 W/18653570-18653570 FN1254-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3626-S.SNP.9:18654006 chr09:018654006 0 W/18654006-18654006 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.32155;DP=3352;DP4=1465,1752,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00686157;MQB=0.00281877;MQSB=5.00158e-18;RPB=0.918476;SGB=26.2136;VDB=0.507228;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.9:18655042 chr09:018655042 0 W/18655042-18655042 FN433-S Single Base Substitution C-T STOP_GAINED HET LOC_Os09g30970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN-316.SNP.9:18659604 chr09:018659604 0 W/18659604-18659604 FN-316 Single Base Substitution T-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN3439-S.SNP.9:18659988 chr09:018659988 0 W/18659988-18659988 FN3439-S SNP G -> T AC=1;AN=184;BQB=0.97734;DP=2539;DP4=1167,1231,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60304e-05;MQSB=0.976535;RPB=0.86594;SGB=18.1394;VDB=0.038698;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.9:18661029 chr09:018661029 0 W/18661029-18661029 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.810167;DP=3164;DP4=1637,1419,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.0386e-14;MQSB=0.865109;RPB=0.602206;SGB=93.9603;VDB=0.785289;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.9:18664379 chr09:018664379 0 W/18664379-18664379 FN411-S Single Base Substitution G-C INTRON HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN411-S.SNP.9:18664380 chr09:018664380 0 W/18664380-18664380 FN411-S Single Base Substitution C-A INTRON HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN-402.SNP.9:18670397 chr09:018670397 0 W/18670397-18670397 FN-402 Single Base Substitution A-G INTRON HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1631-S.SNP.9:18675014 chr09:018675014 0 W/18675014-18675014 FN1631-S Single Base Substitution C-T INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3842-S.SNP.9:18675201 chr09:018675201 0 W/18675201-18675201 FN3842-S SNP C -> T AC=2;AN=190;BQB=0.0942455;DP=2422;DP4=1222,1032,12,3;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.000289799;MQSB=0.992915;RPB=0.868668;SGB=62.7569;VDB=0.690334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P8L|259|LOC_Os09g31060|protein_coding|CODING|LOC_Os09g31060.1|1|1) FN2442.SNP.9:18677332 chr09:018677332 0 W/18677332-18677332 FN2442 SNP T -> C AC=2;AN=200;BQB=0.414282;DP=3822;DP4=1825,1729,14,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.33075e-17;MQSB=0.00028967;RPB=0.582296;SGB=146.368;VDB=0.271054;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.9:18678006 chr09:018678006 0 W/18678006-18678006 FN848-S Single Base Substitution C-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN957-S.SNP.9:18689160 chr09:018689160 0 W/18689160-18689160 FN957-S Single Base Substitution T-A INTRON HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN858-S.SNP.9:18697278 chr09:018697278 0 W/18697278-18697278 FN858-S Single Base Substitution C-T INTERGENIC HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. FN743-S.SNP.9:18702831 chr09:018702831 0 W/18702831-18702831 FN743-S Single Base Substitution T-G INTERGENIC HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN2550-S.SNP.9:18711655 chr09:018711655 0 W/18711655-18711655 FN2550-S SNP A -> G AC=1;AN=198;BQB=0.995963;DP=3835;DP4=1767,1863,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16012e-05;MQSB=0.931801;RPB=0.917465;SGB=11.1786;VDB=0.279539;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.9:18721639 chr09:018721639 0 W/18721639-18721639 FN4021-S SNP C -> T AC=2;AN=168;BQB=0.938848;DP=2385;DP4=1033,1250,10,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.93602e-13;MQSB=0.737037;RPB=0.524103;SGB=114.204;VDB=0.701935;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.9:18722414 chr09:018722414 0 W/18722414-18722414 FN1327-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN937-S.SNP.9:18724580 chr09:018724580 0 W/18724580-18724580 FN937-S Single Base Substitution T-A INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN-275.SNP.9:18735551 chr09:018735551 0 W/18735551-18735551 FN-275 Single Base Substitution T-A INTRON HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1423-S.SNP.9:18738037 chr09:018738037 0 W/18738037-18738037 FN1423-S Single Base Substitution G-T INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1085-S.SNP.9:18752368 chr09:018752368 0 W/18752368-18752368 FN1085-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2794-S.SNP.9:18759470 chr09:018759470 0 W/18759470-18759470 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.583994;DP=2905;DP4=1289,1489,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000344234;MQB=0.000113311;MQSB=6.66101e-21;RPB=0.864687;SGB=32.9588;VDB=0.123546;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.9:18761587 chr09:018761587 0 W/18761587-18761587 FN888-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN-60.SNP.9:18766033 chr09:018766033 0 W/18766033-18766033 FN-60 Single Base Substitution G-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1133-S.SNP.9:18766302 chr09:018766302 0 W/18766302-18766302 FN1133-S Single Base Substitution G-A INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN810-S.SNP.9:18779113 chr09:018779113 0 W/18779113-18779113 FN810-S Single Base Substitution G-A INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-223.SNP.9:18781316 chr09:018781316 0 W/18781316-18781316 FN-223 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g31220 expressed protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-223.SNP.9:18781317 chr09:018781317 0 W/18781317-18781317 FN-223 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g31220 expressed protein SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3875-S.SNP.9:18803358 chr09:018803358 0 W/18803358-18803358 FN3875-S SNP A -> G AC=2;AN=158;BQB=0.802708;DP=1937;DP4=814,544,22,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.9434e-12;MQSB=0.659959;RPB=0.867896;SGB=-29.5096;VDB=0.922766;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F27L|457|LOC_Os09g31270|protein_coding|CODING|LOC_Os09g31270.1|1|1) FN3493-S.SNP.9:18818133 chr09:018818133 0 W/18818133-18818133 FN3493-S SNP A -> T AC=1;AN=184;BQB=0.408958;DP=3031;DP4=1356,1368,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38213e-06;MQSB=0.886018;RPB=0.0114802;SGB=-14.714;VDB=0.182506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.9:18819569 chr09:018819569 0 W/18819569-18819569 FN2342 SNP C -> T AC=1;AN=192;BQB=0.816164;DP=4846;DP4=2382,2201,7,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.74987e-07;MQSB=0.911396;RPB=0.135166;SGB=29.087;VDB=0.109006;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.9:18819576 chr09:018819576 0 W/18819576-18819576 FN861-S Single Base Substitution C-T INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN4202-S.SNP.9:18819918 chr09:018819918 0 W/18819918-18819918 FN4202-S SNP G -> A AC=1;AN=170;BQB=0.991409;DP=2246;DP4=1050,1121,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16812e-10;MQSB=0.973514;RPB=0.413936;SGB=78.9707;VDB=0.467038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.9:18820774 chr09:018820774 0 W/18820774-18820774 FN2308 SNP T -> A AC=1;AN=192;BQB=0.357879;DP=4868;DP4=2172,2437,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.69476e-08;MQSB=0.996991;RPB=0.92415;SGB=13.6122;VDB=0.77203;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.9:18820978 chr09:018820978 0 W/18820978-18820978 FN2715-S SNP A -> T AC=1;AN=200;BQB=0.676176;DP=5074;DP4=2645,2127,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.27413e-18;MQSB=0.879982;RPB=0.685206;SGB=63.3521;VDB=0.202297;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.9:18828485 chr09:018828485 0 W/18828485-18828485 FN489-S Single Base Substitution G-A INTERGENIC HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN1557-S.SNP.9:18832425 chr09:018832425 0 W/18832425-18832425 FN1557-S Single Base Substitution G-A INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-196.SNP.9:18832826 chr09:018832826 0 W/18832826-18832826 FN-196 Single Base Substitution C-T INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-248.SNP.9:18836595 chr09:018836595 0 W/18836595-18836595 FN-248 Single Base Substitution C-T INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN-346.SNP.9:18842480 chr09:018842480 0 W/18842480-18842480 FN-346 Single Base Substitution C-G INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN413-S.SNP.9:18842493 chr09:018842493 0 W/18842493-18842493 FN413-S Single Base Substitution C-T INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3948-S.SNP.9:18848064 chr09:018848064 0 W/18848064-18848064 FN3948-S SNP C -> T AC=2;AN=168;BQB=0.915529;DP=2469;DP4=1249,1069,24,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.73414e-19;MQSB=0.797664;RPB=0.99914;SGB=162.943;VDB=0.905639;EFF=UTR_3_PRIME(MODIFIER||850||456|LOC_Os09g31350|protein_coding|CODING|LOC_Os09g31350.1|7|1) FN863-S.SNP.9:18867078 chr09:018867078 0 W/18867078-18867078 FN863-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g31380 jmjC domain-containing protein 5, putative, expressed SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3369-S.SNP.9:18872112 chr09:018872112 0 W/18872112-18872112 FN3369-S SNP T -> A AC=2;AN=184;BQB=0.952085;DP=3512;DP4=1483,1816,22,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.53484e-21;MQSB=0.98926;RPB=0.968123;SGB=127.314;VDB=0.845249;EFF=INTRON(MODIFIER||||523|LOC_Os09g31390|protein_coding|CODING|LOC_Os09g31390.1|8|1),INTRON(MODIFIER||||521|LOC_Os09g31390|protein_coding|CODING|LOC_Os09g31390.2|8|1),INTRON(MODIFIER||||427|LOC_Os09g31390|protein_coding|CODING|LOC_Os09g31390.3|6|1) FN-121.SNP.9:18873283 chr09:018873283 0 W/18873283-18873283 FN-121 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g31390 transcription factor, putative, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1464-S.SNP.9:18875570 chr09:018875570 0 W/18875570-18875570 FN1464-S Single Base Substitution T-A INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN829-S.SNP.9:18875649 chr09:018875649 0 W/18875649-18875649 FN829-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os09g31390 transcription factor, putative, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN-256.SNP.9:18878034 chr09:018878034 0 W/18878034-18878034 FN-256 Single Base Substitution A-T INTERGENIC HOMO SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3531-S.SNP.9:18881054 chr09:018881054 0 W/18881054-18881054 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.964882;DP=2686;DP4=1269,1329,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.80887e-05;MQSB=0.977974;RPB=0.00200421;SGB=39.8925;VDB=0.034237;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.9:18894591 chr09:018894591 0 W/18894591-18894591 FN964-S Single Base Substitution G-C INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3495-S.SNP.9:18897080 chr09:018897080 0 W/18897080-18897080 FN3495-S SNP C -> T AC=2;AN=188;BQB=0.565375;DP=3183;DP4=1793,1269,18,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.50355e-12;MQSB=0.593155;RPB=0.0497825;SGB=117.128;VDB=0.801383;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.9:18900903 chr09:018900903 0 W/18900903-18900903 FN-362 Single Base Substitution G-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2320.SNP.9:18908655 chr09:018908655 0 W/18908655-18908655 FN2320 SNP C -> T AC=1;AN=192;BQB=0.299251;DP=5381;DP4=2751,2190,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.86471e-07;MQSB=0.993022;RPB=0.231451;SGB=-34.8921;VDB=0.152765;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.9:18913044 chr09:018913044 0 W/18913044-18913044 FN-160 Single Base Substitution A-C INTERGENIC HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN487-S.SNP.9:18919457 chr09:018919457 0 W/18919457-18919457 FN487-S Single Base Substitution C-T INTRON HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN-180.SNP.9:18925308 chr09:018925308 0 W/18925308-18925308 FN-180 Single Base Substitution A-G INTERGENIC HOMO SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN-281.SNP.9:18930572 chr09:018930572 0 W/18930572-18930572 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN792-S.SNP.9:18932689 chr09:018932689 0 W/18932689-18932689 FN792-S Single Base Substitution A-T INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN661-S.SNP.9:18935366 chr09:018935366 0 W/18935366-18935366 FN661-S Single Base Substitution T-C INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2104-S.SNP.9:18937864 chr09:018937864 0 W/18937864-18937864 FN2104-S SNP A -> T AC=2;AN=168;BQB=0.933649;DP=3008;DP4=1884,1088,20,5;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00265957;MQB=8.39515e-11;MQSB=0.991789;RPB=0.660644;SGB=-12.3568;VDB=0.988222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F99I|261|LOC_Os09g31442|protein_coding|CODING|LOC_Os09g31442.1|3|1) FN1344-S.SNP.9:18938461 chr09:018938461 0 W/18938461-18938461 FN1344-S Single Base Substitution T-A SPLICE_SITE_REGION HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3385-S.SNP.9:18943965 chr09:018943965 0 W/18943965-18943965 FN3385-S SNP T -> G AC=1;AN=184;BQB=0.922073;DP=2899;DP4=1022,1742,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=6.93231e-07;MQSB=5.58894e-31;RPB=0.4121;SGB=48.7425;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.9:18945219 chr09:018945219 0 W/18945219-18945219 FN959-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2311.SNP.9:18950984 chr09:018950984 0 W/18950984-18950984 FN2311 SNP C -> T AC=1;AN=192;BQB=0.107017;DP=4386;DP4=2298,1525,13,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.40886e-07;MQSB=0.00150183;RPB=0.929347;SGB=28.9139;VDB=0.986516;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A98|342|LOC_Os09g31450|protein_coding|CODING|LOC_Os09g31450.1|1|1) FN1741-S.SNP.9:18974737 chr09:018974737 0 W/18974737-18974737 FN1741-S SNP G -> T AC=1;AN=188;BQB=0.652768;DP=3723;DP4=2205,1467,20,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.42592e-10;MQSB=0.998406;RPB=0.921781;SGB=-70.6427;VDB=0.516261;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.9:18976919 chr09:018976919 0 W/18976919-18976919 FN621-S Single Base Substitution C-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2583-S.SNP.9:18984900 chr09:018984900 0 W/18984900-18984900 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.595456;DP=4927;DP4=2146,2530,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.36161e-07;MQSB=0.99413;RPB=0.299065;SGB=33.0593;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.9:18994308 chr09:018994308 0 W/18994308-18994308 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.995965;DP=4968;DP4=1984,2639,6,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69474e-15;MQSB=0.855358;RPB=0.196193;SGB=19.1209;VDB=0.702304;EFF=INTERGENIC(MODIFIER||||||||||1) FN1007-S.SNP.9:19000976 chr09:019000976 0 W/19000976-19000976 FN1007-S Single Base Substitution C-A INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN1640-S.SNP.9:19002045 chr09:019002045 0 W/19002045-19002045 FN1640-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os09g31494 conserved hypothetical protein SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN976-S.SNP.9:19002045 chr09:019002045 0 W/19002045-19002045 FN976-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g31494 conserved hypothetical protein SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN601-S.SNP.9:19002150 chr09:019002150 0 W/19002150-19002150 FN601-S Single Base Substitution G-A INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1543-S.SNP.9:19009293 chr09:019009293 0 W/19009293-19009293 FN1543-S Single Base Substitution C-A INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. W466-5-1.SNP.9:19009755 chr09:019009755 0 W/19009755-19009755 W466-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. W466-5-1.SNP.9:19009756 chr09:019009756 0 W/19009756-19009756 W466-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1309-S.SNP.9:19014733 chr09:019014733 0 W/19014733-19014733 FN1309-S Single Base Substitution C-T INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2119-S.SNP.9:19016998 chr09:019016998 0 W/19016998-19016998 FN2119-S SNP G -> C AC=1;AN=168;BQB=0.909811;DP=1922;DP4=338,1555,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000520291;MQB=2.14518e-07;MQSB=0.909764;RPB=0.2603;SGB=27.8864;VDB=0.0012481;EFF=INTRON(MODIFIER||||220|LOC_Os09g31506|protein_coding|CODING|LOC_Os09g31506.1|3|1) FN501-S.SNP.9:19021921 chr09:019021921 0 W/19021921-19021921 FN501-S Single Base Substitution G-A INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN-246.SNP.9:19029062 chr09:019029062 0 W/19029062-19029062 FN-246 Single Base Substitution G-A INTRON HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2120-S.SNP.9:19029862 chr09:019029862 0 W/19029862-19029862 FN2120-S SNP A -> T AC=2;AN=168;BQB=0.184107;DP=3617;DP4=1725,1683,36,29;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=1.95684e-05;MQSB=0;RPB=0.988359;SGB=-491.029;VDB=0.00185956;EFF=INTRON(MODIFIER||||166|LOC_Os09g31518|protein_coding|CODING|LOC_Os09g31518.1|1|1) FN2554-S.SNP.9:19031288 chr09:019031288 0 W/19031288-19031288 FN2554-S SNP T -> G AC=2;AN=198;BQB=0.93553;DP=3861;DP4=1779,1727,18,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.23208e-20;MQSB=0.959418;RPB=0.999859;SGB=104.861;VDB=0.442803;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D15A|166|LOC_Os09g31518|protein_coding|CODING|LOC_Os09g31518.1|1|1) FN2554-S.SNP.9:19031289 chr09:019031289 0 W/19031289-19031289 FN2554-S SNP C -> T AC=2;AN=198;BQB=0.578319;DP=3850;DP4=1869,1784,16,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.95659e-19;MQSB=0.994322;RPB=0.993652;SGB=127.666;VDB=0.47887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D15N|166|LOC_Os09g31518|protein_coding|CODING|LOC_Os09g31518.1|1|1) FN-150.SNP.9:19034809 chr09:019034809 0 W/19034809-19034809 FN-150 Single Base Substitution T-G INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2458.SNP.9:19035254 chr09:019035254 0 W/19035254-19035254 FN2458 SNP G -> T AC=1;AN=200;BQB=0.544238;DP=4526;DP4=1963,2245,5,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44923e-08;MQSB=0.98309;RPB=0.788899;SGB=81.8956;VDB=0.714362;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.9:19043486 chr09:019043486 0 W/19043486-19043486 FN2593-S SNP G -> T AC=1;AN=198;BQB=0.346811;DP=4131;DP4=2105,1782,17,18;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.343742;MQB=0.878969;MQSB=1.67374e-30;RPB=0.541564;SGB=115.647;VDB=0.865501;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.9:19047716 chr09:019047716 0 W/19047716-19047716 FN2553-S SNP A -> G AC=1;AN=198;BQB=0.264955;DP=4109;DP4=1805,2068,3,8;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0338282;MQB=0.87673;MQSB=1.43444e-11;RPB=0.563301;SGB=-17.4065;VDB=0.429561;EFF=INTRON(MODIFIER||||158|LOC_Os09g31940|protein_coding|CODING|LOC_Os09g31940.1|1|1) FN3979-S.SNP.9:19047927 chr09:019047927 0 W/19047927-19047927 FN3979-S SNP T -> C AC=1;AN=168;BQB=0.886464;DP=2690;DP4=1173,1392,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0163569;MQB=0.702641;MQSB=0.612;RPB=0.911424;SGB=74.3269;VDB=0.409408;EFF=INTRON(MODIFIER||||158|LOC_Os09g31940|protein_coding|CODING|LOC_Os09g31940.1|1|1) FN2749-S.SNP.9:19051274 chr09:019051274 0 W/19051274-19051274 FN2749-S SNP G -> T AC=1;AN=200;BQB=0.368377;DP=4716;DP4=2139,2355,8,10;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.0733673;MQB=0.453538;MQSB=0;RPB=0.59368;SGB=54.6902;VDB=0.177892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R607L|1937|LOC_Os09g31950|protein_coding|CODING|LOC_Os09g31950.1|1|1) FN3382-S.SNP.9:19057231 chr09:019057231 0 W/19057231-19057231 FN3382-S SNP G -> A AC=1;AN=184;BQB=0.161153;DP=3858;DP4=1773,2008,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00725765;MQB=0.0207191;MQSB=0.0469427;RPB=0.816583;SGB=60.4004;VDB=0.950899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R766W|1096|LOC_Os09g31960|protein_coding|CODING|LOC_Os09g31960.1|1|1) FN3707-S.SNP.9:19060627 chr09:019060627 0 W/19060627-19060627 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.677792;DP=2134;DP4=1309,756,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.219775;MQB=0.227609;MQSB=0;RPB=0.81329;SGB=53.6492;VDB=0.777864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3817-S.SNP.9:19077612 chr09:019077612 0 W/19077612-19077612 FN3817-S SNP C -> A AC=2;AN=190;BQB=0.996858;DP=2885;DP4=1353,1344,8,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.60063e-14;MQSB=0.957549;RPB=0.469956;SGB=112.85;VDB=0.837366;EFF=INTRON(MODIFIER||||576|LOC_Os09g31970|protein_coding|CODING|LOC_Os09g31970.1|3|1) FN4009-S.SNP.9:19078537 chr09:019078537 0 W/19078537-19078537 FN4009-S SNP G -> T AC=2;AN=168;BQB=0.868155;DP=2605;DP4=1262,1192,13,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.72992e-13;MQSB=0.802106;RPB=0.882284;SGB=11.3448;VDB=0.922608;EFF=UTR_3_PRIME(MODIFIER||514||576|LOC_Os09g31970|protein_coding|CODING|LOC_Os09g31970.1|4|1) FN2196-S.SNP.9:19088260 chr09:019088260 0 W/19088260-19088260 FN2196-S SNP T -> A AC=1;AN=190;BQB=0.79582;DP=4768;DP4=2212,2254,14,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.49928e-16;MQSB=0.814967;RPB=0.933451;SGB=56.8601;VDB=0.0486842;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.9:19092918 chr09:019092918 0 W/19092918-19092918 FN541-S Single Base Substitution T-G INTERGENIC HOMO SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1128-S.SNP.9:19109657 chr09:019109657 0 W/19109657-19109657 FN1128-S Single Base Substitution T-C INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN3763-S.SNP.9:19127812 chr09:019127812 0 W/19127812-19127812 FN3763-S SNP C -> A AC=1;AN=190;BQB=0.98848;DP=2739;DP4=1335,1322,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.54736e-07;MQSB=0.967914;RPB=0.766388;SGB=39.9877;VDB=0.560195;EFF=INTRON(MODIFIER||||395|LOC_Os09g32050|protein_coding|CODING|LOC_Os09g32050.1|4|1),INTRON(MODIFIER||||328|LOC_Os09g32050|protein_coding|CODING|LOC_Os09g32050.2|3|1) FN2687-S.SNP.9:19130043 chr09:019130043 0 W/19130043-19130043 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.636756;DP=4663;DP4=2320,2012,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.442e-10;MQSB=0.788029;RPB=0.486037;SGB=68.0801;VDB=0.123095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.9:19133168 chr09:019133168 0 W/19133168-19133168 FN3064-S SNP C -> T AC=2;AN=184;BQB=0.907488;DP=2642;DP4=1615,945,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.2032e-09;MQSB=0.923238;RPB=0.930534;SGB=103.004;VDB=0.973411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.9:19138880 chr09:019138880 0 W/19138880-19138880 FN3933-S SNP G -> T AC=1;AN=158;BQB=0.939829;DP=3055;DP4=1520,1414,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000654664;MQB=2.24814e-06;MQSB=0.124713;RPB=0.686849;SGB=64.5449;VDB=0.923849;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.9:19147444 chr09:019147444 0 W/19147444-19147444 FN487-S Single Base Substitution T-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2539-S.SNP.9:19149595 chr09:019149595 0 W/19149595-19149595 FN2539-S SNP T -> G AC=1;AN=198;BQB=0.415295;DP=4348;DP4=2206,1910,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.93806e-14;MQSB=0.990414;RPB=0.339192;SGB=-39.8795;VDB=0.193382;EFF=UTR_3_PRIME(MODIFIER||90||326|LOC_Os09g32080|protein_coding|CODING|LOC_Os09g32080.1|3|1),INTRON(MODIFIER||||326|LOC_Os09g32080|protein_coding|CODING|LOC_Os09g32080.2|3|1) FN3537-S.SNP.9:19155947 chr09:019155947 0 W/19155947-19155947 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.998857;DP=3359;DP4=1346,1931,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.62985e-10;MQSB=0.943933;RPB=0.606548;SGB=85.3253;VDB=0.106656;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.9:19158508 chr09:019158508 0 W/19158508-19158508 FN919-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN919-S.SNP.9:19158509 chr09:019158509 0 W/19158509-19158509 FN919-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g32095 expressed protein SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN-160.SNP.9:19167831 chr09:019167831 0 W/19167831-19167831 FN-160 Single Base Substitution T-C UTR_3_PRIME HET SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN3863-S.SNP.9:19173205 chr09:019173205 0 W/19173205-19173205 FN3863-S SNP G -> T AC=1;AN=158;BQB=0.76234;DP=2492;DP4=1274,1118,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.76705e-07;MQSB=0.966332;RPB=0.963964;SGB=51.4366;VDB=0.792118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.9:19175747 chr09:019175747 0 W/19175747-19175747 FN2178-S SNP T -> A AC=1;AN=168;BQB=0.15718;DP=3667;DP4=1911,1701,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57294e-05;MQSB=0.999511;RPB=0.980685;SGB=-15.3725;VDB=0.0758628;EFF=INTRON(MODIFIER||||491|LOC_Os09g32120|protein_coding|CODING|LOC_Os09g32120.1|3|1) FN4229-S.SNP.9:19176353 chr09:019176353 0 W/19176353-19176353 FN4229-S SNP T -> A AC=1;AN=170;BQB=0.843245;DP=2474;DP4=1184,1192,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000151003;MQSB=0.998701;RPB=0.701402;SGB=38.987;VDB=0.534485;EFF=INTRON(MODIFIER||||491|LOC_Os09g32120|protein_coding|CODING|LOC_Os09g32120.1|5|1) FN596-S.SNP.9:19176353 chr09:019176353 0 W/19176353-19176353 FN596-S Single Base Substitution T-A INTRON HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN-142.SNP.9:19188999 chr09:019188999 0 W/19188999-19188999 FN-142 Single Base Substitution C-T INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN1732-S.SNP.9:19197664 chr09:019197664 0 W/19197664-19197664 FN1732-S SNP C -> G AC=2;AN=188;BQB=0.99576;DP=1020;DP4=432,499,5,8;HOB=0.0210502;ICB=0.494738;MQ=23;MQ0F=0.307843;MQB=0.566686;MQSB=0.00165769;RPB=0.00940553;SGB=35.9843;VDB=0.00837166;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.9:19209660 chr09:019209660 0 W/19209660-19209660 FN886-S Single Base Substitution G-A INTERGENIC HOMO SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN3420-S.SNP.9:19211932 chr09:019211932 0 W/19211932-19211932 FN3420-S SNP G -> T AC=1;AN=184;BQB=0.435759;DP=2695;DP4=1296,1302,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.45452e-07;MQSB=0.780185;RPB=0.779256;SGB=15.7097;VDB=0.548795;EFF=INTRON(MODIFIER||||240|LOC_Os09g32190|protein_coding|CODING|LOC_Os09g32190.1|1|1) FN2794-S.SNP.9:19216828 chr09:019216828 0 W/19216828-19216828 FN2794-S SNP T -> A AC=1;AN=198;BQB=0.978623;DP=3981;DP4=1981,1813,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.34657e-08;MQSB=0.992461;RPB=0.227345;SGB=50.9344;VDB=0.878735;EFF=INTRON(MODIFIER||||391|LOC_Os09g32200|protein_coding|CODING|LOC_Os09g32200.1|1|1) FN876-S.SNP.9:19220145 chr09:019220145 0 W/19220145-19220145 FN876-S Single Base Substitution A-T INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2668-S.SNP.9:19220275 chr09:019220275 0 W/19220275-19220275 FN2668-S SNP G -> T AC=1;AN=200;BQB=0.20474;DP=4706;DP4=2181,2285,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.07245e-14;MQSB=0.87949;RPB=0.916954;SGB=95.7111;VDB=0.428433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.9:19220275 chr09:019220275 0 W/19220275-19220275 FN3064-S SNP G -> T AC=2;AN=184;BQB=0.977796;DP=2822;DP4=1446,1248,13,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.68048e-13;MQSB=0.98448;RPB=0.864733;SGB=48.493;VDB=0.370941;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.9:19220275 chr09:019220275 0 W/19220275-19220275 FN4109-S SNP G -> T AC=1;AN=182;BQB=0.286901;DP=2792;DP4=1374,1317,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.79412e-05;MQSB=0.722393;RPB=0.87372;SGB=39.1386;VDB=0.921594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.9:19230192 chr09:019230192 0 W/19230192-19230192 FN2426 SNP C -> A AC=1;AN=200;BQB=0.714296;DP=4600;DP4=2015,2222,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10606e-06;MQSB=0.795104;RPB=0.186209;SGB=33.0593;VDB=0.122175;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.9:19232108 chr09:019232108 0 W/19232108-19232108 FN4077-S SNP T -> C AC=1;AN=182;BQB=0.95344;DP=2940;DP4=1465,1409,7,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.00975e-07;MQSB=0.999905;RPB=0.554853;SGB=32.1169;VDB=0.855219;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.9:19234959 chr09:019234959 0 W/19234959-19234959 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1554-S.SNP.9:19238103 chr09:019238103 0 W/19238103-19238103 FN1554-S Single Base Substitution G-A INTRON Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1554-S.SNP.9:19238104 chr09:019238104 0 W/19238104-19238104 FN1554-S Single Base Substitution C-A INTRON Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN3364-S.SNP.9:19252001 chr09:019252001 0 W/19252001-19252001 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.964774;DP=3893;DP4=1534,2150,10,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.66016e-16;MQSB=0.827693;RPB=0.714905;SGB=121.091;VDB=0.0618868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.9:19282406 chr09:019282406 0 W/19282406-19282406 FN2286 SNP C -> T AC=1;AN=192;BQB=0.719469;DP=5197;DP4=2465,2430,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17941e-14;MQSB=0.948039;RPB=0.283089;SGB=-39.2487;VDB=0.798739;EFF=INTRON(MODIFIER||||616|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.1|3|1),INTRON(MODIFIER||||398|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.2|3|1),INTRON(MODIFIER||||398|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.3|3|1) FN2492.SNP.9:19283877 chr09:019283877 0 W/19283877-19283877 FN2492 SNP C -> G AC=1;AN=200;BQB=0.936668;DP=4916;DP4=2475,2147,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.02244e-17;MQSB=0.952076;RPB=0.999648;SGB=87.1368;VDB=0.97021;EFF=INTRON(MODIFIER||||616|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.1|5|1),INTRON(MODIFIER||||398|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.2|5|1),INTRON(MODIFIER||||398|LOC_Os09g32300|protein_coding|CODING|LOC_Os09g32300.3|5|1) FN3761-S.SNP.9:19286134 chr09:019286134 0 W/19286134-19286134 FN3761-S SNP T -> A AC=1;AN=190;BQB=0.966971;DP=2208;DP4=1097,980,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.05181e-05;MQSB=0.750829;RPB=0.927386;SGB=-17.0991;VDB=0.546126;EFF=INTERGENIC(MODIFIER||||||||||1) FN4125-S.SNP.9:19286134 chr09:019286134 0 W/19286134-19286134 FN4125-S SNP T -> A AC=1;AN=182;BQB=0.995018;DP=2536;DP4=1278,1123,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.46318e-06;MQSB=0.982495;RPB=0.583568;SGB=20.6332;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN-24.SNP.9:19292148 chr09:019292148 0 W/19292148-19292148 FN-24 Single Base Substitution C-A INTERGENIC Homo SNo: 24, Mutant_ID: FN-24, Generation: M2, Mutations: 27, Genes: 8, Seed availability: Yes. FN1636-S.SNP.9:19295020 chr09:019295020 0 W/19295020-19295020 FN1636-S Single Base Substitution C-T INTRON HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN-146.SNP.9:19295488 chr09:019295488 0 W/19295488-19295488 FN-146 Single Base Substitution A-T INTRON HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN4184-S.SNP.9:19300280 chr09:019300280 0 W/19300280-19300280 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.969333;DP=2815;DP4=1252,1462,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000207598;MQSB=0.980164;RPB=0.975489;SGB=30.1021;VDB=0.594311;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.9:19300652 chr09:019300652 0 W/19300652-19300652 FN_822-5-1 Single Base Substitution C-G Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. W7-1-1.SNP.9:19301504 chr09:019301504 0 W/19301504-19301504 W7-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN4154-S.SNP.9:19304530 chr09:019304530 0 W/19304530-19304530 FN4154-S SNP G -> C AC=1;AN=170;BQB=0.995409;DP=2552;DP4=1496,960,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.44863e-09;MQSB=0.948938;RPB=0.969143;SGB=65.6427;VDB=0.0279625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D80E|259|LOC_Os09g32330|protein_coding|CODING|LOC_Os09g32330.1|1|1) FN849-S.SNP.9:19310112 chr09:019310112 0 W/19310112-19310112 FN849-S Single Base Substitution C-T INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1720-S.SNP.9:19313314 chr09:019313314 0 W/19313314-19313314 FN1720-S SNP A -> T AC=1;AN=188;BQB=0.901403;DP=3450;DP4=1617,1798,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.33889e-09;MQSB=0.762557;RPB=0.664573;SGB=31.1628;VDB=0.907891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.9:19322624 chr09:019322624 0 W/19322624-19322624 FN3748-S SNP G -> A AC=2;AN=190;BQB=0.89495;DP=2995;DP4=1569,1286,18,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.2113e-21;MQSB=0.926169;RPB=0.98761;SGB=149.281;VDB=0.726682;EFF=INTRON(MODIFIER||||203|LOC_Os09g32350|protein_coding|CODING|LOC_Os09g32350.1|2|1) FN3325-S.SNP.9:19325337 chr09:019325337 0 W/19325337-19325337 FN3325-S SNP G -> A AC=1;AN=184;BQB=0.579845;DP=2846;DP4=1223,1485,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45163e-05;MQSB=0.479591;RPB=0.970961;SGB=-0.806606;VDB=0.938316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.9:19350610 chr09:019350610 0 W/19350610-19350610 FN2749-S SNP A -> G AC=1;AN=200;BQB=0.813527;DP=5027;DP4=2258,2573,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25646e-12;MQSB=0.876017;RPB=0.998604;SGB=81.8956;VDB=0.392716;EFF=INTRON(MODIFIER||||167|LOC_Os09g32400|protein_coding|CODING|LOC_Os09g32400.1|1|1) FN-140.SNP.9:19353807 chr09:019353807 0 W/19353807-19353807 FN-140 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g32410 OsFBX333 - F-box domain containing protein, expressed SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2753-S.SNP.9:19362809 chr09:019362809 0 W/19362809-19362809 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.996668;DP=4918;DP4=2105,2479,10,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.05534e-16;MQSB=0.723964;RPB=0.947142;SGB=87.1368;VDB=0.618967;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.9:19364418 chr09:019364418 0 W/19364418-19364418 FN465-S Single Base Substitution G-C INTRON HOMO SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN412-S.SNP.9:19372443 chr09:019372443 0 W/19372443-19372443 FN412-S Single Base Substitution G-A INTRON HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1709-S.SNP.9:19375717 chr09:019375717 0 W/19375717-19375717 FN1709-S SNP G -> A AC=1;AN=188;BQB=0.802253;DP=1505;DP4=742,720,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=16;MQ0F=0.374086;MQB=0.458185;MQSB=0.000284302;RPB=0.375942;SGB=44.4357;VDB=0.616215;EFF=INTRON(MODIFIER||||866|LOC_Os09g32450|protein_coding|CODING|LOC_Os09g32450.1|3|1) FN-189.SNP.9:19382949 chr09:019382949 0 W/19382949-19382949 FN-189 Single Base Substitution A-G INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2447.SNP.9:19383733 chr09:019383733 0 W/19383733-19383733 FN2447 SNP T -> C AC=1;AN=200;BQB=0.280784;DP=5126;DP4=2357,2507,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.02906e-10;MQSB=0.95666;RPB=0.998117;SGB=81.8956;VDB=0.499039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.9:19393432 chr09:019393432 0 W/19393432-19393432 FN3814-S SNP C -> T AC=1;AN=190;BQB=0.339598;DP=3143;DP4=1345,1700,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00127267;MQB=0.000705634;MQSB=0.996256;RPB=0.666121;SGB=35.4339;VDB=0.832119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D79N|473|LOC_Os09g32490|protein_coding|CODING|LOC_Os09g32490.1|2|1) FN2753-S.SNP.9:19400857 chr09:019400857 0 W/19400857-19400857 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.839598;DP=5127;DP4=2191,2685,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.91929e-11;MQSB=0.930364;RPB=0.97861;SGB=34.6953;VDB=0.434617;EFF=UTR_3_PRIME(MODIFIER||116||133|LOC_Os09g32500|protein_coding|CODING|LOC_Os09g32500.1|4|1),UTR_3_PRIME(MODIFIER||116||133|LOC_Os09g32500|protein_coding|CODING|LOC_Os09g32500.2|4|1) FN2539-S.SNP.9:19401640 chr09:019401640 0 W/19401640-19401640 FN2539-S SNP G -> T AC=1;AN=198;BQB=0.998409;DP=3956;DP4=1919,1815,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.22228e-14;MQSB=0.995429;RPB=0.922825;SGB=76.1002;VDB=0.989242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.9:19406545 chr09:019406545 0 W/19406545-19406545 FN3341-S SNP T -> C AC=1;AN=184;BQB=0.972491;DP=2527;DP4=1202,1258,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.70468e-05;MQSB=0.935618;RPB=0.677075;SGB=26.1347;VDB=0.987063;EFF=STOP_LOST(HIGH|MISSENSE|tAg/tGg|*367W|366|LOC_Os09g32510|protein_coding|CODING|LOC_Os09g32510.4|8|1),STOP_LOST(HIGH|MISSENSE|tAg/tGg|*263W|262|LOC_Os09g32510|protein_coding|CODING|LOC_Os09g32510.5|7|1),STOP_LOST(HIGH|MISSENSE|tAg/tGg|*399W|398|LOC_Os09g32510|protein_coding|CODING|LOC_Os09g32510.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L365|368|LOC_Os09g32510|protein_coding|CODING|LOC_Os09g32510.3|8|1),UTR_3_PRIME(MODIFIER||111||389|LOC_Os09g32510|protein_coding|CODING|LOC_Os09g32510.2|6|1) FN2232-S.SNP.9:19415328 chr09:019415328 0 W/19415328-19415328 FN2232-S SNP A -> C AC=1;AN=190;BQB=0.387028;DP=5021;DP4=2326,2327,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57624e-09;MQSB=0.991391;RPB=0.781509;SGB=36.4291;VDB=0.132675;EFF=UTR_3_PRIME(MODIFIER||345||154|LOC_Os09g32526|protein_coding|CODING|LOC_Os09g32526.1|6|1),UTR_3_PRIME(MODIFIER||345||110|LOC_Os09g32526|protein_coding|CODING|LOC_Os09g32526.2|5|1) FN876-S.SNP.9:19450405 chr09:019450405 0 W/19450405-19450405 FN876-S Single Base Substitution C-T INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN938-S.SNP.9:19454169 chr09:019454169 0 W/19454169-19454169 FN938-S Single Base Substitution G-A INTERGENIC HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1623-S.SNP.9:19457722 chr09:019457722 0 W/19457722-19457722 FN1623-S Single Base Substitution A-T INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3592-S.SNP.9:19463953 chr09:019463953 0 W/19463953-19463953 FN3592-S SNP A -> G AC=2;AN=188;BQB=0.999683;DP=2781;DP4=1387,1234,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.83562e-13;MQSB=0.970432;RPB=0.900245;SGB=54.0524;VDB=0.0460575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.9:19500492 chr09:019500492 0 W/19500492-19500492 FN3862-S SNP T -> G AC=1;AN=158;BQB=0.873092;DP=2444;DP4=1096,1275,6,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.05234e-05;MQSB=0.979;RPB=0.276397;SGB=29.5899;VDB=0.454873;EFF=INTRON(MODIFIER||||198|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.3|1|1),INTRON(MODIFIER||||257|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.1|3|1),INTRON(MODIFIER||||214|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.2|2|1),INTRON(MODIFIER||||180|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.4|2|1) FN2628-S.SNP.9:19501745 chr09:019501745 0 W/19501745-19501745 FN2628-S SNP G -> T AC=1;AN=200;BQB=0.999863;DP=4469;DP4=2119,2096,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.60681e-06;MQSB=0.856269;RPB=0.112499;SGB=22.2439;VDB=0.354937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R122L|257|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R79L|214|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R63L|198|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.3|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cTg|R45L|180|LOC_Os09g32680|protein_coding|CODING|LOC_Os09g32680.4|5|1) FN1003-S.SNP.9:19518068 chr09:019518068 0 W/19518068-19518068 FN1003-S Single Base Substitution T-A INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN4047-S.SNP.9:19519747 chr09:019519747 0 W/19519747-19519747 FN4047-S SNP G -> A AC=2;AN=168;BQB=0.375591;DP=2235;DP4=1269,885,12,4;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.87109e-10;MQSB=0.903939;RPB=0.992785;SGB=65.4653;VDB=0.268925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S99L|214|LOC_Os09g32730|protein_coding|CODING|LOC_Os09g32730.1|1|1) FN4047-S.SNP.9:19519748 chr09:019519748 0 W/19519748-19519748 FN4047-S SNP A -> T AC=2;AN=168;BQB=0.90958;DP=2226;DP4=1194,814,14,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.89413e-10;MQSB=0.916034;RPB=0.996995;SGB=8.48315;VDB=0.642595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S99T|214|LOC_Os09g32730|protein_coding|CODING|LOC_Os09g32730.1|1|1) FN2758-S.SNP.9:19520235 chr09:019520235 0 W/19520235-19520235 FN2758-S SNP T -> G AC=2;AN=200;BQB=0.924591;DP=4272;DP4=2153,1824,13,21;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000468165;MQB=2.85334e-13;MQSB=2.35104e-26;RPB=0.819341;SGB=112.373;VDB=0.0619167;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.9:19520743 chr09:019520743 0 W/19520743-19520743 FN-307 Single Base Substitution C-T INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN2108-S.SNP.9:19521834 chr09:019521834 0 W/19521834-19521834 FN2108-S SNP G -> C AC=1;AN=168;BQB=0.736525;DP=2669;DP4=1660,969,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.94551e-05;MQSB=0.868606;RPB=0.982358;SGB=12.4615;VDB=0.965844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.9:19523557 chr09:019523557 0 W/19523557-19523557 FN1028-S Single Base Substitution A-G INTRON HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-73.SNP.9:19528334 chr09:019528334 0 W/19528334-19528334 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2249-S.SNP.9:19535677 chr09:019535677 0 W/19535677-19535677 FN2249-S SNP T -> C AC=1;AN=190;BQB=0.999145;DP=4843;DP4=2121,2406,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.59527e-06;MQSB=0.140794;RPB=0.206522;SGB=44.5415;VDB=0.349765;EFF=INTRON(MODIFIER||||372|LOC_Os09g32750|protein_coding|CODING|LOC_Os09g32750.1|2|1) FN547-S.SNP.9:19540355 chr09:019540355 0 W/19540355-19540355 FN547-S Single Base Substitution C-T INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN1644-S.SNP.9:19541952 chr09:019541952 0 W/19541952-19541952 FN1644-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1644-S.SNP.9:19541953 chr09:019541953 0 W/19541953-19541953 FN1644-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1012-S.SNP.9:19550956 chr09:019550956 0 W/19550956-19550956 FN1012-S Single Base Substitution A-C INTRON HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2282.SNP.9:19552827 chr09:019552827 0 W/19552827-19552827 FN2282 SNP C -> T AC=1;AN=192;BQB=0.868949;DP=5222;DP4=2514,2343,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.04256e-08;MQSB=0.324242;RPB=0.710155;SGB=-91.06;VDB=0.450553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.9:19560917 chr09:019560917 0 W/19560917-19560917 FN2178-S SNP G -> A AC=1;AN=168;BQB=0.927728;DP=2946;DP4=1316,1570,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0594026;MQB=0.586139;MQSB=0;RPB=0.841531;SGB=12.4615;VDB=0.118261;EFF=INTERGENIC(MODIFIER||||||||||1) FN-284.SNP.9:19572444 chr09:019572444 0 W/19572444-19572444 FN-284 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os09g32820 uridine/cytidine kinase-like 1, putative, expressed SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3325-S.SNP.9:19573170 chr09:019573170 0 W/19573170-19573170 FN3325-S SNP T -> A AC=1;AN=184;BQB=0.935908;DP=2804;DP4=1207,1490,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.39133e-08;MQSB=0.999091;RPB=0.660563;SGB=32.2261;VDB=0.479045;EFF=INTRON(MODIFIER||||496|LOC_Os09g32820|protein_coding|CODING|LOC_Os09g32820.1|9|1) FN1412-S.SNP.9:19600251 chr09:019600251 0 W/19600251-19600251 FN1412-S Single Base Substitution T-A INTRON HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN1007-S.SNP.9:19608513 chr09:019608513 0 W/19608513-19608513 FN1007-S Single Base Substitution T-A INTERGENIC HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN1318-S.SNP.9:19612330 chr09:019612330 0 W/19612330-19612330 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN4011-S.SNP.9:19617225 chr09:019617225 0 W/19617225-19617225 FN4011-S SNP G -> A AC=1;AN=168;BQB=0.798353;DP=2667;DP4=1204,1338,21,26;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000374953;MQB=2.03015e-24;MQSB=0.988856;RPB=0.666354;SGB=113.783;VDB=0.374394;EFF=INTRON(MODIFIER||||462|LOC_Os09g32910|protein_coding|CODING|LOC_Os09g32910.1|3|1) FN-56.SNP.9:19617827 chr09:019617827 0 W/19617827-19617827 FN-56 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os09g32910 OsFBX337 - F-box domain containing protein, expressed SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN467-S.SNP.9:19621206 chr09:019621206 0 W/19621206-19621206 FN467-S Single Base Substitution G-C INTRON HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3826-S.SNP.9:19627175 chr09:019627175 0 W/19627175-19627175 FN3826-S SNP A -> T AC=2;AN=190;BQB=0.713183;DP=2668;DP4=1291,1269,18,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.29193e-12;MQSB=0.812434;RPB=0.91121;SGB=108.296;VDB=0.924438;EFF=INTRON(MODIFIER||||610|LOC_Os09g32930|protein_coding|CODING|LOC_Os09g32930.1|17|1),INTRON(MODIFIER||||609|LOC_Os09g32930|protein_coding|CODING|LOC_Os09g32930.3|17|1) FN-104.SNP.9:19628381 chr09:019628381 0 W/19628381-19628381 FN-104 Single Base Substitution C-T INTRON HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1152-S.SNP.9:19635679 chr09:019635679 0 W/19635679-19635679 FN1152-S Single Base Substitution C-T INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2185-S.SNP.9:19635700 chr09:019635700 0 W/19635700-19635700 FN2185-S SNP T -> C AC=2;AN=190;BQB=0.107572;DP=5004;DP4=2248,2314,26,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.34715e-28;MQSB=0.947873;RPB=0.398256;SGB=217.589;VDB=0.464587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.9:19636479 chr09:019636479 0 W/19636479-19636479 FN2179-S SNP G -> A AC=2;AN=168;BQB=0.171561;DP=4079;DP4=2152,1869,21,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.19416e-13;MQSB=0.844676;RPB=0.344799;SGB=-176.456;VDB=0.290082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.9:19652745 chr09:019652745 0 W/19652745-19652745 FN3570-S SNP C -> T AC=1;AN=190;BQB=0.998701;DP=2986;DP4=1328,1525,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.26044e-09;MQSB=0.795854;RPB=0.983048;SGB=46.7622;VDB=0.629558;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.9:19654129 chr09:019654129 0 W/19654129-19654129 FN550-S Single Base Substitution T-C INTRON HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN-223.SNP.9:19660402 chr09:019660402 0 W/19660402-19660402 FN-223 Single Base Substitution A-G INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3777-S.SNP.9:19665607 chr09:019665607 0 W/19665607-19665607 FN3777-S SNP A -> T AC=1;AN=190;BQB=0.914224;DP=2922;DP4=1459,1334,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.9089e-08;MQSB=0.785209;RPB=0.285287;SGB=67.3108;VDB=0.987083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.9:19674789 chr09:019674789 0 W/19674789-19674789 FN1561-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1561-S.SNP.9:19674790 chr09:019674790 0 W/19674790-19674790 FN1561-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g32964 peroxidase precursor, putative, expressed SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN862-S.SNP.9:19683030 chr09:019683030 0 W/19683030-19683030 FN862-S Single Base Substitution T-A INTERGENIC HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN3462-S.SNP.9:19697434 chr09:019697434 0 W/19697434-19697434 FN3462-S SNP G -> A AC=2;AN=184;BQB=0.847024;DP=3157;DP4=1578,1419,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08309e-12;MQSB=0.957712;RPB=0.588087;SGB=74.4875;VDB=0.930843;EFF=UTR_3_PRIME(MODIFIER||76||140|LOC_Os09g32992|protein_coding|CODING|LOC_Os09g32992.1|2|1) FN750-S.SNP.9:19707435 chr09:019707435 0 W/19707435-19707435 FN750-S Single Base Substitution T-C INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN-154.SNP.9:19712123 chr09:019712123 0 W/19712123-19712123 FN-154 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g33460 double-stranded RNA binding motif containing protein, expressed SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN-154.SNP.9:19712124 chr09:019712124 0 W/19712124-19712124 FN-154 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g33460 double-stranded RNA binding motif containing protein, expressed SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3789-S.SNP.9:19715313 chr09:019715313 0 W/19715313-19715313 FN3789-S SNP A -> G AC=2;AN=190;BQB=0.566708;DP=2694;DP4=1225,1292,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.99518e-10;MQSB=0.963184;RPB=0.999947;SGB=85.5263;VDB=0.960482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.9:19717688 chr09:019717688 0 W/19717688-19717688 FN3632-S SNP T -> G AC=2;AN=190;BQB=0.936293;DP=2584;DP4=1204,1279,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.19556e-15;MQSB=0.893154;RPB=0.376381;SGB=117.403;VDB=0.571001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2596-S.SNP.9:19718385 chr09:019718385 0 W/19718385-19718385 FN2596-S SNP T -> C AC=2;AN=198;BQB=0.925931;DP=4018;DP4=1939,1852,21,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.4508e-24;MQSB=0.995307;RPB=0.981289;SGB=102.008;VDB=0.920246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.9:19722499 chr09:019722499 0 W/19722499-19722499 FN1633-S Single Base Substitution C-G INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1749-S.SNP.9:19728883 chr09:019728883 0 W/19728883-19728883 FN1749-S SNP C -> A AC=2;AN=188;BQB=0.813726;DP=4014;DP4=2068,1874,30,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.97177e-28;MQSB=0.944086;RPB=0.527217;SGB=107.462;VDB=0.397955;EFF=INTRON(MODIFIER||||363|LOC_Os09g33470|protein_coding|CODING|LOC_Os09g33470.1|11|1) FN1239-S.SNP.9:19733070 chr09:019733070 0 W/19733070-19733070 FN1239-S Single Base Substitution C-T INTRON HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2429.SNP.9:19733711 chr09:019733711 0 W/19733711-19733711 FN2429 SNP G -> T AC=1;AN=200;BQB=0.882682;DP=4421;DP4=2427,1726,11,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00203574;MQB=1.2671e-05;MQSB=0.783065;RPB=0.991135;SGB=-10.6896;VDB=0.637804;EFF=INTRON(MODIFIER||||363|LOC_Os09g33470|protein_coding|CODING|LOC_Os09g33470.1|1|1) FN767-S.SNP.9:19734103 chr09:019734103 0 W/19734103-19734103 FN767-S Single Base Substitution C-T INTRON HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN835-S.SNP.9:19737819 chr09:019737819 0 W/19737819-19737819 FN835-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g33480 DAG protein, chloroplast precursor, putative, expressed SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-308.SNP.9:19738446 chr09:019738446 0 W/19738446-19738446 FN-308 Single Base Substitution C-T INTRON HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN-90.SNP.9:19741221 chr09:019741221 0 W/19741221-19741221 FN-90 Single Base Substitution G-A INTERGENIC HOMO SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-250.SNP.9:19742430 chr09:019742430 0 W/19742430-19742430 FN-250 Single Base Substitution G-A INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1304-S.SNP.9:19748393 chr09:019748393 0 W/19748393-19748393 FN1304-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2684-S.SNP.9:19756845 chr09:019756845 0 W/19756845-19756845 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.983243;DP=5125;DP4=2579,2180,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09692e-07;MQSB=0.891736;RPB=0.996128;SGB=40.2696;VDB=0.527722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A262V|376|LOC_Os09g33500|protein_coding|CODING|LOC_Os09g33500.1|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A242V|356|LOC_Os09g33500|protein_coding|CODING|LOC_Os09g33500.2|10|1),SPLICE_SITE_REGION(LOW||||376|LOC_Os09g33500|protein_coding|CODING|LOC_Os09g33500.1|11|1),SPLICE_SITE_REGION(LOW||||356|LOC_Os09g33500|protein_coding|CODING|LOC_Os09g33500.2|10|1) FN1345-S.SNP.9:19759792 chr09:019759792 0 W/19759792-19759792 FN1345-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2130-S.SNP.9:19762328 chr09:019762328 0 W/19762328-19762328 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.0849864;DP=4045;DP4=1975,2033,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.18776e-05;MQSB=0.995592;RPB=0.327972;SGB=-87.7854;VDB=0.476431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M75I|627|LOC_Os09g33510|protein_coding|CODING|LOC_Os09g33510.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M75I|627|LOC_Os09g33510|protein_coding|CODING|LOC_Os09g33510.2|3|1) FN3455-S.SNP.9:19787696 chr09:019787696 0 W/19787696-19787696 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.965686;DP=2930;DP4=1273,1547,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.1492e-07;MQSB=0.992795;RPB=0.642396;SGB=44.2207;VDB=0.165711;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.9:19794790 chr09:019794790 0 W/19794790-19794790 FN494-S Single Base Substitution A-T INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN2697-S.SNP.9:19799988 chr09:019799988 0 W/19799988-19799988 FN2697-S SNP G -> T AC=1;AN=200;BQB=0.861114;DP=4871;DP4=2470,2145,22,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.95379e-18;MQSB=0.999597;RPB=0.649654;SGB=31.9623;VDB=0.150012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.9:19810582 chr09:019810582 0 W/19810582-19810582 FN2461 SNP T -> A AC=1;AN=200;BQB=0.887263;DP=4965;DP4=2256,2380,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28338e-15;MQSB=0.96588;RPB=0.975546;SGB=33.5675;VDB=0.0881159;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.9:19820852 chr09:019820852 0 W/19820852-19820852 FN796-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g33590 retrotransposon protein, putative, unclassified, expressed SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN-188.SNP.9:19832128 chr09:019832128 0 W/19832128-19832128 FN-188 Single Base Substitution T-C INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN698-S.SNP.9:19833103 chr09:019833103 0 W/19833103-19833103 FN698-S Single Base Substitution G-A INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN3932-S.SNP.9:19835211 chr09:019835211 0 W/19835211-19835211 FN3932-S SNP T -> A AC=2;AN=158;BQB=0.277624;DP=2476;DP4=1225,1056,8,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.28922e-07;MQSB=0.986821;RPB=0.616737;SGB=8.93339;VDB=0.293058;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.9:19835876 chr09:019835876 0 W/19835876-19835876 FN-140 Single Base Substitution C-G INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3807-S.SNP.9:19837077 chr09:019837077 0 W/19837077-19837077 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.621065;DP=2515;DP4=1139,1286,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000612295;MQSB=0.947808;RPB=0.964107;SGB=35.4339;VDB=0.892739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.9:19841842 chr09:019841842 0 W/19841842-19841842 FN2457 SNP A -> G AC=1;AN=200;BQB=0.651877;DP=4837;DP4=2349,2188,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020674;MQB=9.19109e-14;MQSB=0.980683;RPB=0.95836;SGB=47.7211;VDB=0.142981;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.9:19844625 chr09:019844625 0 W/19844625-19844625 FN2309 SNP G -> A AC=1;AN=192;BQB=0.0402163;DP=7068;DP4=3706,2958,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.029004;MQB=1.79169e-08;MQSB=0.355435;RPB=0.188752;SGB=-71.6791;VDB=0.69675;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T1215I|1981|LOC_Os09g33610|protein_coding|CODING|LOC_Os09g33610.1|9|1) FN539-S.SNP.9:19854037 chr09:019854037 0 W/19854037-19854037 FN539-S Single Base Substitution T-C INTERGENIC HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN-223.SNP.9:19856807 chr09:019856807 0 W/19856807-19856807 FN-223 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g33620 Leucine Rich Repeat domain containing protein, expressed SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-223.SNP.9:19856808 chr09:019856808 0 W/19856808-19856808 FN-223 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-223.SNP.9:19856814 chr09:019856814 0 W/19856814-19856814 FN-223 Single Base Substitution A-T STOP_GAINED HET LOC_Os09g33620 Leucine Rich Repeat domain containing protein, expressed SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3728-S.SNP.9:19858830 chr09:019858830 0 W/19858830-19858830 FN3728-S SNP C -> T AC=1;AN=190;BQB=0.0320381;DP=2282;DP4=1001,1136,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0296846;MQSB=0.689981;RPB=0.778846;SGB=-0.550503;VDB=0.118129;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.9:19864148 chr09:019864148 0 W/19864148-19864148 FN_812-4-1 Single Base Substitution T-A Homo LOC_Os09g33630 protein kinase domain containing protein, expressed SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1668-S.SNP.9:19867417 chr09:019867417 0 W/19867417-19867417 FN1668-S SNP C -> T AC=1;AN=188;BQB=0.998484;DP=3576;DP4=1703,1839,6,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.61463e-14;MQSB=0.959403;RPB=0.643035;SGB=94.4119;VDB=0.781587;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.9:19868527 chr09:019868527 0 W/19868527-19868527 FN1153-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN2625-S.SNP.9:19873526 chr09:019873526 0 W/19873526-19873526 FN2625-S SNP A -> T AC=1;AN=200;BQB=0.0937255;DP=5221;DP4=2455,2379,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63092e-10;MQSB=0.998863;RPB=0.999767;SGB=-8.87404;VDB=0.629265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.9:19873914 chr09:019873914 0 W/19873914-19873914 FN2190-S SNP T -> G AC=1;AN=190;BQB=0.497528;DP=5022;DP4=2343,2362,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.0642e-09;MQSB=0.000770718;RPB=0.900194;SGB=54.3062;VDB=0.403322;EFF=INTERGENIC(MODIFIER||||||||||1) FN-21.SNP.9:19874315 chr09:019874315 0 W/19874315-19874315 FN-21 Single Base Substitution G-A INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN3555-S.SNP.9:19875789 chr09:019875789 0 W/19875789-19875789 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.298756;DP=2723;DP4=1336,1222,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.50474e-08;MQSB=0.999809;RPB=0.850835;SGB=41.3359;VDB=0.0576888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.9:19882315 chr09:019882315 0 W/19882315-19882315 FN2117-S SNP T -> C AC=1;AN=168;BQB=0.198385;DP=4364;DP4=1991,2312,11,16;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00110893;MQSB=0.151756;RPB=0.935902;SGB=-105.77;VDB=0.874379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.9:19894483 chr09:019894483 0 W/19894483-19894483 FN3803-S SNP G -> T AC=2;AN=190;BQB=0.984584;DP=3363;DP4=1340,1716,19,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.61557e-21;MQSB=0.924679;RPB=0.967277;SGB=149.825;VDB=0.227343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.9:19897721 chr09:019897721 0 W/19897721-19897721 FN2385 SNP G -> T AC=1;AN=192;BQB=0.139873;DP=4616;DP4=2133,2218,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0017331;MQB=1.92327e-08;MQSB=5.19048e-07;RPB=0.442329;SGB=103.938;VDB=0.900324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.9:19898955 chr09:019898955 0 W/19898955-19898955 FN2446 SNP G -> C AC=2;AN=200;BQB=0.756059;DP=4287;DP4=2080,1968,21,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.82913e-19;MQSB=0.356503;RPB=0.999759;SGB=115.978;VDB=0.0270986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.9:19900906 chr09:019900906 0 W/19900906-19900906 FN2587-S SNP A -> C AC=2;AN=198;BQB=0.89174;DP=4241;DP4=1845,2115,25,21;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.08932e-17;MQSB=0.027837;RPB=0.999767;SGB=104.603;VDB=0.780173;EFF=UTR_3_PRIME(MODIFIER||150||533|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.1|13|1),UTR_3_PRIME(MODIFIER||179||508|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.2|13|1),UTR_3_PRIME(MODIFIER||179||348|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.3|13|1),UTR_3_PRIME(MODIFIER||1635||274|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.4|13|1) FN2730-S.SNP.9:19901046 chr09:019901046 0 W/19901046-19901046 FN2730-S SNP A -> T AC=1;AN=200;BQB=0.117254;DP=4937;DP4=2711,1905,8,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.36433e-07;MQSB=0.748851;RPB=0.340535;SGB=34.6953;VDB=0.44158;EFF=UTR_3_PRIME(MODIFIER||10||533|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.1|13|1),UTR_3_PRIME(MODIFIER||39||508|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.2|13|1),UTR_3_PRIME(MODIFIER||39||348|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.3|13|1),UTR_3_PRIME(MODIFIER||1495||274|LOC_Os09g33690|protein_coding|CODING|LOC_Os09g33690.4|13|1) FN856-S.SNP.9:19906985 chr09:019906985 0 W/19906985-19906985 FN856-S Single Base Substitution A-T INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN-197.SNP.9:19910792 chr09:019910792 0 W/19910792-19910792 FN-197 Single Base Substitution T-C INTRON HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN3888-S.SNP.9:19913143 chr09:019913143 0 W/19913143-19913143 FN3888-S SNP C -> G AC=2;AN=158;BQB=0.998802;DP=2797;DP4=1091,1545,27,26;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.85217e-28;MQSB=0.988025;RPB=0.989426;SGB=190.009;VDB=0.991737;EFF=INTRON(MODIFIER||||504|LOC_Os09g33710|protein_coding|CODING|LOC_Os09g33710.1|6|1) FN3541-S.SNP.9:19927531 chr09:019927531 0 W/19927531-19927531 FN3541-S SNP A -> C AC=1;AN=188;BQB=0.972645;DP=2586;DP4=1192,1296,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.9211e-06;MQSB=0.903624;RPB=0.354695;SGB=35.3493;VDB=0.146504;EFF=INTRON(MODIFIER||||576|LOC_Os09g33740|protein_coding|CODING|LOC_Os09g33740.1|4|1) FN3838-S.SNP.9:19929999 chr09:019929999 0 W/19929999-19929999 FN3838-S SNP G -> C AC=1;AN=190;BQB=0.568403;DP=2366;DP4=730,1469,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00127421;MQSB=0.972704;RPB=0.0546319;SGB=44.5415;VDB=0.170749;EFF=INTRON(MODIFIER||||576|LOC_Os09g33740|protein_coding|CODING|LOC_Os09g33740.1|8|1) FN4109-S.SNP.9:19932428 chr09:019932428 0 W/19932428-19932428 FN4109-S SNP A -> T AC=1;AN=182;BQB=0.984726;DP=3159;DP4=1505,1570,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.25385e-06;MQSB=0.820295;RPB=0.601268;SGB=35.0899;VDB=0.364077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.9:19935482 chr09:019935482 0 W/19935482-19935482 FN2262-S SNP G -> A AC=1;AN=190;BQB=0.532568;DP=4788;DP4=2455,1965,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00584795;MQB=0.00918192;MQSB=0.848001;RPB=0.997546;SGB=78.7471;VDB=0.203866;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R507|1239|LOC_Os09g33750|protein_coding|CODING|LOC_Os09g33750.1|3|1) FN1762-S.SNP.9:19937269 chr09:019937269 0 W/19937269-19937269 FN1762-S SNP G -> A AC=1;AN=188;BQB=0.00222033;DP=3153;DP4=1516,1604,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0155408;MQB=0.00339998;MQSB=0;RPB=0.73878;SGB=-63.3592;VDB=0.753977;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W1103*|1239|LOC_Os09g33750|protein_coding|CODING|LOC_Os09g33750.1|3|1) FN3868-S.SNP.9:19937984 chr09:019937984 0 W/19937984-19937984 FN3868-S SNP G -> A AC=1;AN=158;BQB=0.964251;DP=2359;DP4=1134,1131,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.000532387;MQSB=0.0182333;RPB=0.305673;SGB=29.5899;VDB=0.146847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.9:19939182 chr09:019939182 0 W/19939182-19939182 FN2458 SNP A -> G AC=1;AN=200;BQB=0.000109114;DP=4726;DP4=2063,1683,18,27;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.5206e-14;MQSB=0.645282;RPB=0.848305;SGB=-1137.57;VDB=0.0648787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y104C|184|LOC_Os09g33760|protein_coding|CODING|LOC_Os09g33760.1|1|1) FN-284.SNP.9:19941348 chr09:019941348 0 W/19941348-19941348 FN-284 Single Base Substitution G-A INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3836-S.SNP.9:19948546 chr09:019948546 0 W/19948546-19948546 FN3836-S SNP G -> A AC=2;AN=190;BQB=0.996885;DP=2567;DP4=1188,1278,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.2754e-14;MQSB=0.936415;RPB=0.174184;SGB=94.6341;VDB=0.739406;EFF=UTR_3_PRIME(MODIFIER||191||410|LOC_Os09g33780|protein_coding|CODING|LOC_Os09g33780.1|8|1) FN1739-S.SNP.9:19950493 chr09:019950493 0 W/19950493-19950493 FN1739-S SNP C -> G AC=2;AN=188;BQB=0.968406;DP=2952;DP4=801,2108,8,25;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=5.27497e-11;MQSB=0.0237408;RPB=0.999473;SGB=106.85;VDB=0.78407;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.9:19952310 chr09:019952310 0 W/19952310-19952310 FN403-S Single Base Substitution T-A INTRON HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN704-S.SNP.9:19954683 chr09:019954683 0 W/19954683-19954683 FN704-S Single Base Substitution T-C INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN1515-S.SNP.9:19957146 chr09:019957146 0 W/19957146-19957146 FN1515-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. 704-4-3.SNP.9:19960056 chr09:019960056 0 W/19960056-19960056 704-4-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. FN498-S.SNP.9:19960847 chr09:019960847 0 W/19960847-19960847 FN498-S Single Base Substitution C-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2551-S.SNP.9:19968733 chr09:019968733 0 W/19968733-19968733 FN2551-S SNP A -> T AC=2;AN=198;BQB=0.538024;DP=3940;DP4=1947,1792,30,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.64592e-27;MQSB=0.987943;RPB=0.25953;SGB=219.568;VDB=0.345594;EFF=UTR_3_PRIME(MODIFIER||136||379|LOC_Os09g33820|protein_coding|CODING|LOC_Os09g33820.1|8|1),INTRON(MODIFIER||||471|LOC_Os09g33820|protein_coding|CODING|LOC_Os09g33820.2|8|1),INTRON(MODIFIER||||270|LOC_Os09g33820|protein_coding|CODING|LOC_Os09g33820.3|8|1) FN-93.SNP.9:19971837 chr09:019971837 0 W/19971837-19971837 FN-93 Single Base Substitution A-T INTRON HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1336-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN1336-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN1358-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN1358-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1513-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN1513-S Single Base Substitution C-A INTERGENIC Homo SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1579-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN1579-S Single Base Substitution C-A INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2451.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN2451 SNP C -> A AC=2;AN=200;BQB=0.240279;DP=5446;DP4=2800,2257,42,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.29147e-38;MQSB=0.9996;RPB=0.943453;SGB=167.559;VDB=0.0224179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN3713-S SNP C -> A AC=2;AN=190;BQB=0.692801;DP=3293;DP4=1686,1469,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.50212e-13;MQSB=0.955641;RPB=0.984039;SGB=25.8654;VDB=0.948698;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN466-S Single Base Substitution C-A INTERGENIC HOMO SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN914-S.SNP.9:20008035 chr09:020008035 0 W/20008035-20008035 FN914-S Single Base Substitution C-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-62.SNP.9:20018431 chr09:020018431 0 W/20018431-20018431 FN-62 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g33910 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN-402.SNP.9:20023155 chr09:020023155 0 W/20023155-20023155 FN-402 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g33920 expressed protein SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1151-S.SNP.9:20023284 chr09:020023284 0 W/20023284-20023284 FN1151-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2126-S.SNP.9:20030077 chr09:020030077 0 W/20030077-20030077 FN2126-S SNP A -> G AC=2;AN=168;BQB=0.717014;DP=4154;DP4=2031,2051,26,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.64105e-25;MQSB=0.99152;RPB=0.788712;SGB=1.42934;VDB=0.322526;EFF=INTRON(MODIFIER||||433|LOC_Os09g33940|protein_coding|CODING|LOC_Os09g33940.2|2|1) FN3629-S.SNP.9:20030521 chr09:020030521 0 W/20030521-20030521 FN3629-S SNP A -> G AC=1;AN=190;BQB=0.905597;DP=3153;DP4=1716,1364,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24886e-07;MQSB=0.990032;RPB=0.935869;SGB=62.7569;VDB=0.710252;EFF=INTRON(MODIFIER||||433|LOC_Os09g33940|protein_coding|CODING|LOC_Os09g33940.2|2|1) FN3955-S.SNP.9:20032563 chr09:020032563 0 W/20032563-20032563 FN3955-S SNP T -> C AC=1;AN=168;BQB=0.568228;DP=2036;DP4=835,935,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05447e-06;MQSB=0.114028;RPB=0.453796;SGB=-0.101747;VDB=0.0445127;EFF=INTRON(MODIFIER||||433|LOC_Os09g33940|protein_coding|CODING|LOC_Os09g33940.2|2|1),INTRON(MODIFIER||||603|LOC_Os09g33940|protein_coding|CODING|LOC_Os09g33940.1|1|1) FN891-S.SNP.9:20054308 chr09:020054308 0 W/20054308-20054308 FN891-S Single Base Substitution A-G INTRON HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2243-S.SNP.9:20055852 chr09:020055852 0 W/20055852-20055852 FN2243-S SNP T -> C AC=2;AN=190;BQB=0.14012;DP=5161;DP4=2242,2271,27,30;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=2.44373e-18;MQSB=0.394488;RPB=0.559283;SGB=7.82534;VDB=0.000595372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C312R|633|LOC_Os09g33970|protein_coding|CODING|LOC_Os09g33970.1|3|1) FN3811-S.SNP.9:20060591 chr09:020060591 0 W/20060591-20060591 FN3811-S SNP T -> A AC=2;AN=190;BQB=0.742749;DP=3009;DP4=1348,1511,19,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.57231e-20;MQSB=0.936178;RPB=0.998051;SGB=-1.03669;VDB=0.10891;EFF=INTRON(MODIFIER||||1198|LOC_Os09g33980|protein_coding|CODING|LOC_Os09g33980.1|2|1) FN-203.SNP.9:20087740 chr09:020087740 0 W/20087740-20087740 FN-203 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. W22-2-1.SNP.9:20092124 chr09:020092124 0 W/20092124-20092124 W22-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g34050 expressed protein SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2595-S.SNP.9:20102190 chr09:020102190 0 W/20102190-20102190 FN2595-S SNP T -> C AC=2;AN=198;BQB=0.750413;DP=4160;DP4=2008,1819,17,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.87427e-19;MQSB=0.993476;RPB=0.82386;SGB=97.671;VDB=0.462893;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.9:20103108 chr09:020103108 0 W/20103108-20103108 FN1471-S SNP G -> A AC=2;AN=188;BQB=0.604287;DP=4473;DP4=2154,2254,24,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.64083e-20;MQSB=0.993384;RPB=0.981501;SGB=-152.771;VDB=0.580746;EFF=INTERGENIC(MODIFIER||||||||||1) FN960-S.SNP.9:20118902 chr09:020118902 0 W/20118902-20118902 FN960-S Single Base Substitution T-A INTRON HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN457-S.SNP.9:20119980 chr09:020119980 0 W/20119980-20119980 FN457-S Single Base Substitution T-A INTRON HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN4066-S.SNP.9:20120297 chr09:020120297 0 W/20120297-20120297 FN4066-S SNP C -> T AC=1;AN=168;BQB=0.996384;DP=2831;DP4=1448,1294,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.62631e-06;MQSB=0.971561;RPB=0.866997;SGB=34.4498;VDB=0.0780669;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M225I|570|LOC_Os09g34090|protein_coding|CODING|LOC_Os09g34090.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M225I|516|LOC_Os09g34090|protein_coding|CODING|LOC_Os09g34090.2|3|1) FN2095-S.SNP.9:20121788 chr09:020121788 0 W/20121788-20121788 FN2095-S SNP C -> A AC=1;AN=168;BQB=0.747176;DP=2858;DP4=2023,780,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.59524e-09;MQSB=0.241749;RPB=0.864005;SGB=-66.4989;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.9:20132497 chr09:020132497 0 W/20132497-20132497 FN418-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os09g34110 expressed protein SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN845-S.SNP.9:20140923 chr09:020140923 0 W/20140923-20140923 FN845-S Single Base Substitution T-G INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN4065-S.SNP.9:20144432 chr09:020144432 0 W/20144432-20144432 FN4065-S SNP T -> C AC=1;AN=168;BQB=0.93356;DP=1905;DP4=1161,685,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.34344e-06;MQSB=0.871767;RPB=0.722381;SGB=27.8864;VDB=0.721802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.9:20145943 chr09:020145943 0 W/20145943-20145943 FN3857-S SNP C -> T AC=1;AN=158;BQB=0.873327;DP=2341;DP4=1227,1026,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.88305e-05;MQSB=0.992302;RPB=0.563649;SGB=14.3409;VDB=0.511287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R45W|169|LOC_Os09g34120|protein_coding|CODING|LOC_Os09g34120.1|2|1) FN854-S.SNP.9:20153101 chr09:020153101 0 W/20153101-20153101 FN854-S Single Base Substitution T-A INTRON HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN854-S.SNP.9:20153102 chr09:020153102 0 W/20153102-20153102 FN854-S Single Base Substitution C-A INTRON HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2330.SNP.9:20154208 chr09:020154208 0 W/20154208-20154208 FN2330 SNP C -> A AC=2;AN=192;BQB=0.9884;DP=4251;DP4=1893,1973,13,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.55837e-13;MQSB=0.0462673;RPB=0.204724;SGB=140.497;VDB=0.18618;EFF=START_GAINED(LOW||||612|LOC_Os09g34130|protein_coding|CODING|LOC_Os09g34130.1|1|1),UTR_5_PRIME(MODIFIER||98||612|LOC_Os09g34130|protein_coding|CODING|LOC_Os09g34130.1|1|1) FN2597-S.SNP.9:20159504 chr09:020159504 0 W/20159504-20159504 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.175608;DP=4250;DP4=2065,2004,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.27442e-08;MQSB=0.162095;RPB=0.536162;SGB=52.7004;VDB=0.834635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R449H|680|LOC_Os09g34150|protein_coding|CODING|LOC_Os09g34150.1|2|1),UTR_3_PRIME(MODIFIER||503||440|LOC_Os09g34150|protein_coding|CODING|LOC_Os09g34150.2|3|1) FN1335-S.SNP.9:20161859 chr09:020161859 0 W/20161859-20161859 FN1335-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g34150 NBS-LRR disease resistance protein, putative, expressed SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2630-S.SNP.9:20166261 chr09:020166261 0 W/20166261-20166261 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.80682;DP=4857;DP4=2575,2085,18,10;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.67292e-13;MQSB=0.162035;RPB=0.996874;SGB=90.7419;VDB=0.0631649;EFF=INTRON(MODIFIER||||975|LOC_Os09g34160|protein_coding|CODING|LOC_Os09g34160.1|1|1) FN2457.SNP.9:20169928 chr09:020169928 0 W/20169928-20169928 FN2457 SNP G -> A AC=1;AN=200;BQB=0.756077;DP=4289;DP4=2114,1942,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67069e-09;MQSB=0.909182;RPB=0.664997;SGB=81.8956;VDB=0.484946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.9:20195326 chr09:020195326 0 W/20195326-20195326 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2269-S.SNP.9:20203684 chr09:020203684 0 W/20203684-20203684 FN2269-S SNP T -> A AC=1;AN=190;BQB=0.934033;DP=4285;DP4=2496,1398,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.88372e-14;MQSB=0.151713;RPB=0.264965;SGB=92.9626;VDB=0.213843;EFF=UTR_3_PRIME(MODIFIER||166||482|LOC_Os09g34214|protein_coding|CODING|LOC_Os09g34214.1|2|1) FN3559-S.SNP.9:20205966 chr09:020205966 0 W/20205966-20205966 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.952811;DP=2357;DP4=1109,1213,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.0988545;MQB=0.649435;MQSB=9.18628e-25;RPB=0.985462;SGB=48.979;VDB=0.0817731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.9:20206068 chr09:020206068 0 W/20206068-20206068 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.833613;DP=2221;DP4=1005,1126,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.040072;MQB=0.245116;MQSB=5.85743e-43;RPB=0.51582;SGB=21.8853;VDB=0.218349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.9:20207254 chr09:020207254 0 W/20207254-20207254 FN2729-S SNP G -> A AC=2;AN=200;BQB=0.00840227;DP=4214;DP4=1537,2144,9,15;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0.00593261;MQB=0.330607;MQSB=0.999601;RPB=0.0192732;SGB=104.921;VDB=0.126879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.9:20211682 chr09:020211682 0 W/20211682-20211682 FN1614-S Single Base Substitution C-T INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1916.SNP.9:20229561 chr09:020229561 0 W/20229561-20229561 FN1916 Single Base Substitution C-T Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2095-S.SNP.9:20232921 chr09:020232921 0 W/20232921-20232921 FN2095-S SNP G -> C AC=2;AN=168;BQB=0.77928;DP=3953;DP4=1930,1963,21,23;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.75735e-23;MQSB=0.124411;RPB=0.662549;SGB=92.6784;VDB=0.07464;EFF=INTRON(MODIFIER||||754|LOC_Os09g34270|protein_coding|CODING|LOC_Os09g34270.1|6|1) FN2540-S.SNP.9:20255881 chr09:020255881 0 W/20255881-20255881 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.98519;DP=3921;DP4=1863,1848,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000255037;MQB=1.20392e-08;MQSB=0.997569;RPB=0.935203;SGB=54.144;VDB=0.148412;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.9:20260402 chr09:020260402 0 W/20260402-20260402 FN622-S Single Base Substitution T-C INTERGENIC HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3559-S.SNP.9:20265840 chr09:020265840 0 W/20265840-20265840 FN3559-S SNP G -> T AC=1;AN=188;BQB=0.998443;DP=2771;DP4=1306,1394,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.99159e-15;MQSB=0.983719;RPB=0.652546;SGB=112.585;VDB=0.930798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.9:20265974 chr09:020265974 0 W/20265974-20265974 FN3411-S SNP A -> C AC=1;AN=184;BQB=0.993588;DP=2581;DP4=1277,1203,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45746e-09;MQSB=0.988617;RPB=0.927139;SGB=23.2751;VDB=0.572021;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.9:20269090 chr09:020269090 0 W/20269090-20269090 FN1488-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g34330 helix-loop-helix DNA-binding domain containing protein, expressed SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN2178-S.SNP.9:20288843 chr09:020288843 0 W/20288843-20288843 FN2178-S SNP T -> G AC=1;AN=168;BQB=0.417737;DP=3376;DP4=1496,1847,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02556e-08;MQSB=0.999866;RPB=0.716612;SGB=27.0464;VDB=0.805578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.9:20290389 chr09:020290389 0 W/20290389-20290389 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.951759;DP=5076;DP4=2321,2535,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.6496e-13;MQSB=0.966629;RPB=0.236083;SGB=42.5108;VDB=0.00876691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.9:20293237 chr09:020293237 0 W/20293237-20293237 FN3380-S SNP G -> T AC=2;AN=184;BQB=0.592358;DP=2749;DP4=1310,1321,9,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31834e-07;MQSB=0.536923;RPB=0.596187;SGB=39.2697;VDB=0.563998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.9:20294558 chr09:020294558 0 W/20294558-20294558 FN3513-S SNP A -> G AC=1;AN=188;BQB=0.988706;DP=3222;DP4=1676,1395,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.95552e-05;MQSB=0.999231;RPB=0.917779;SGB=21.8113;VDB=0.803731;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.9:20303462 chr09:020303462 0 W/20303462-20303462 FN1008-S Single Base Substitution G-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN3480-S.SNP.9:20305980 chr09:020305980 0 W/20305980-20305980 FN3480-S SNP C -> T AC=1;AN=184;BQB=0.370389;DP=3391;DP4=1842,1457,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40815e-09;MQSB=0.999982;RPB=0.982098;SGB=93.9603;VDB=0.35215;EFF=UTR_5_PRIME(MODIFIER||214||82|LOC_Os09g34847|protein_coding|CODING|LOC_Os09g34847.1|1|1),UTR_5_PRIME(MODIFIER||214||82|LOC_Os09g34847|protein_coding|CODING|LOC_Os09g34847.2|1|1) FN1022-S.SNP.9:20309907 chr09:020309907 0 W/20309907-20309907 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2273-S.SNP.9:20323341 chr09:020323341 0 W/20323341-20323341 FN2273-S SNP T -> A AC=2;AN=190;BQB=0.711592;DP=4825;DP4=2241,2210,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.87947e-18;MQSB=0.922972;RPB=0.513022;SGB=153.834;VDB=0.168496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N485K|753|LOC_Os09g34870|protein_coding|CODING|LOC_Os09g34870.1|1|1) FN947-S.SNP.9:20324667 chr09:020324667 0 W/20324667-20324667 FN947-S Single Base Substitution G-T INTRON HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN-216.SNP.9:20325505 chr09:020325505 0 W/20325505-20325505 FN-216 Single Base Substitution A-T INTRON HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3486-S.SNP.9:20326937 chr09:020326937 0 W/20326937-20326937 FN3486-S SNP C -> T AC=1;AN=184;BQB=0.7865;DP=2571;DP4=1209,1268,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57291e-12;MQSB=0.959489;RPB=0.846085;SGB=103.004;VDB=0.131847;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A111V|446|LOC_Os09g34880|protein_coding|CODING|LOC_Os09g34880.1|1|1) FN3600-S.SNP.9:20328913 chr09:020328913 0 W/20328913-20328913 FN3600-S SNP G -> A AC=1;AN=190;BQB=0.958319;DP=3019;DP4=1378,1526,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.58572e-06;MQSB=0.947093;RPB=0.783054;SGB=44.5415;VDB=0.0920819;EFF=INTRON(MODIFIER||||446|LOC_Os09g34880|protein_coding|CODING|LOC_Os09g34880.1|4|1) FN3756-S.SNP.9:20330180 chr09:020330180 0 W/20330180-20330180 FN3756-S SNP T -> C AC=1;AN=190;BQB=0.93865;DP=2731;DP4=1364,1287,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.49199e-06;MQSB=0.956614;RPB=0.538166;SGB=21.8853;VDB=0.0295463;EFF=UTR_3_PRIME(MODIFIER||128||446|LOC_Os09g34880|protein_coding|CODING|LOC_Os09g34880.1|5|1) FN-189.SNP.9:20330377 chr09:020330377 0 W/20330377-20330377 FN-189 Single Base Substitution A-T UTR_3_PRIME HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN620-S.SNP.9:20338033 chr09:020338033 0 W/20338033-20338033 FN620-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN495-S.SNP.9:20341374 chr09:020341374 0 W/20341374-20341374 FN495-S Single Base Substitution T-A INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN1307-S.SNP.9:20358953 chr09:020358953 0 W/20358953-20358953 FN1307-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2318.SNP.9:20359911 chr09:020359911 0 W/20359911-20359911 FN2318 SNP T -> C AC=1;AN=192;BQB=0.956044;DP=4634;DP4=2318,2049,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.96422e-13;MQSB=0.65385;RPB=0.3695;SGB=26.127;VDB=0.565824;EFF=INTRON(MODIFIER||||67|LOC_Os09g34940|protein_coding|CODING|LOC_Os09g34940.1|1|1) FN3418-S.SNP.9:20363463 chr09:020363463 0 W/20363463-20363463 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.85151;DP=3014;DP4=1646,1281,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.067e-06;MQSB=0.993583;RPB=0.98252;SGB=53.2642;VDB=0.382138;EFF=INTERGENIC(MODIFIER||||||||||1) FN1677-S.SNP.9:20374238 chr09:020374238 0 W/20374238-20374238 FN1677-S SNP T -> C AC=1;AN=188;BQB=0.0029053;DP=3181;DP4=1772,1361,31,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.14171e-14;MQSB=0.995203;RPB=0.20861;SGB=-229.107;VDB=0.577735;EFF=INTRON(MODIFIER||||361|LOC_Os09g34970|protein_coding|CODING|LOC_Os09g34970.1|1|1) FN2674-S.SNP.9:20374600 chr09:020374600 0 W/20374600-20374600 FN2674-S SNP T -> A AC=1;AN=200;BQB=0.946332;DP=4541;DP4=1993,2269,18,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44475e-14;MQSB=0.98383;RPB=0.99343;SGB=79.9264;VDB=0.868771;EFF=INTRON(MODIFIER||||361|LOC_Os09g34970|protein_coding|CODING|LOC_Os09g34970.1|1|1) FN-295.SNP.9:20376333 chr09:020376333 0 W/20376333-20376333 FN-295 Single Base Substitution A-T INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1375-S.SNP.9:20380044 chr09:020380044 0 W/20380044-20380044 FN1375-S Single Base Substitution G-A INTRON HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1727-S.SNP.9:20382145 chr09:020382145 0 W/20382145-20382145 FN1727-S SNP C -> A AC=2;AN=188;BQB=0.837629;DP=3986;DP4=2120,1788,31,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.12579e-36;MQSB=0.989866;RPB=0.0940266;SGB=206.633;VDB=0.209444;EFF=INTRON(MODIFIER||||85|LOC_Os09g34985|protein_coding|CODING|LOC_Os09g34985.1|1|1) FN3090-S.SNP.9:20387607 chr09:020387607 0 W/20387607-20387607 FN3090-S SNP C -> A AC=2;AN=184;BQB=0.926678;DP=2616;DP4=1098,1407,7,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.56448e-12;MQSB=0.952185;RPB=0.985065;SGB=80.3949;VDB=0.632356;EFF=INTRON(MODIFIER||||570|LOC_Os09g34990|protein_coding|CODING|LOC_Os09g34990.1|1|1) FN_776-5-1.SNP.9:20391063 chr09:020391063 0 W/20391063-20391063 FN_776-5-1 Single Base Substitution G-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN_776-5-1.SNP.9:20391064 chr09:020391064 0 W/20391064-20391064 FN_776-5-1 Single Base Substitution A-T HET SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN-118.SNP.9:20393938 chr09:020393938 0 W/20393938-20393938 FN-118 Single Base Substitution T-C UTR_3_PRIME HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN3906-S.SNP.9:20395046 chr09:020395046 0 W/20395046-20395046 FN3906-S SNP A -> C AC=1;AN=158;BQB=0.907296;DP=2587;DP4=1101,1356,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.05434e-06;MQSB=0.988087;RPB=0.0762851;SGB=33.9591;VDB=0.41275;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.9:20396523 chr09:020396523 0 W/20396523-20396523 FN2342 SNP C -> T AC=1;AN=192;BQB=0.691384;DP=4386;DP4=2158,1900,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000227998;MQB=5.93075e-06;MQSB=0.175167;RPB=0.00133824;SGB=1.09742;VDB=0.0129172;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.9:20397167 chr09:020397167 0 W/20397167-20397167 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.986209;DP=2901;DP4=1380,1382,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.22749e-13;MQSB=0.85926;RPB=0.506633;SGB=84.9167;VDB=0.574043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.9:20397168 chr09:020397168 0 W/20397168-20397168 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.772592;DP=2913;DP4=1390,1401,17,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.46472e-13;MQSB=0.85844;RPB=0.420808;SGB=-11.0615;VDB=0.364313;EFF=INTERGENIC(MODIFIER||||||||||1) FN436-S.SNP.9:20401189 chr09:020401189 0 W/20401189-20401189 FN436-S Single Base Substitution G-T INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1197-S.SNP.9:20401278 chr09:020401278 0 W/20401278-20401278 FN1197-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN547-S.SNP.9:20401299 chr09:020401299 0 W/20401299-20401299 FN547-S Single Base Substitution T-C INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN-286.SNP.9:20416189 chr09:020416189 0 W/20416189-20416189 FN-286 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os09g35530 expressed protein SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-286.SNP.9:20416190 chr09:020416190 0 W/20416190-20416190 FN-286 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2335.SNP.9:20417049 chr09:020417049 0 W/20417049-20417049 FN2335 SNP C -> T AC=1;AN=192;BQB=0.0581855;DP=5020;DP4=2291,2403,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00677291;MQB=4.29281e-08;MQSB=0.340839;RPB=0.90617;SGB=-112.981;VDB=0.58374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P517S|978|LOC_Os09g35530|protein_coding|CODING|LOC_Os09g35530.1|1|1) FN-118.SNP.9:20418080 chr09:020418080 0 W/20418080-20418080 FN-118 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g35530 expressed protein SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN789-S.SNP.9:20425049 chr09:020425049 0 W/20425049-20425049 FN789-S Single Base Substitution A-G INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN1297-S.SNP.9:20428183 chr09:020428183 0 W/20428183-20428183 FN1297-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1297-S.SNP.9:20428184 chr09:020428184 0 W/20428184-20428184 FN1297-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3967-S.SNP.9:20429075 chr09:020429075 0 W/20429075-20429075 FN3967-S SNP A -> T AC=1;AN=180;BQB=0.824724;DP=2670;DP4=1401,1174,9,16;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=2.11459e-13;MQSB=0.908939;RPB=0.384376;SGB=107.263;VDB=0.456217;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.9:20433130 chr09:020433130 0 W/20433130-20433130 FN_1017-1 Single Base Substitution C-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3869-S.SNP.9:20434699 chr09:020434699 0 W/20434699-20434699 FN3869-S SNP A -> G AC=1;AN=158;BQB=0.970717;DP=2387;DP4=1274,1012,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.38295e-06;MQSB=0.986717;RPB=0.98452;SGB=23.9652;VDB=0.25953;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y99|100|LOC_Os09g35560|protein_coding|CODING|LOC_Os09g35560.1|1|1) FN3404-S.SNP.9:20444524 chr09:020444524 0 W/20444524-20444524 FN3404-S SNP C -> T AC=2;AN=184;BQB=0.962968;DP=2779;DP4=1387,1323,11,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.09704e-07;MQSB=0.953224;RPB=0.906595;SGB=75.8731;VDB=0.502856;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.9:20445512 chr09:020445512 0 W/20445512-20445512 FN4071-S SNP A -> T AC=1;AN=182;BQB=0.664753;DP=3022;DP4=1494,1392,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08801e-08;MQSB=0.992801;RPB=0.998367;SGB=42.6494;VDB=0.832711;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.9:20447472 chr09:020447472 0 W/20447472-20447472 FN798-S Single Base Substitution G-T INTERGENIC HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN457-S.SNP.9:20455985 chr09:020455985 0 W/20455985-20455985 FN457-S Single Base Substitution T-C INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN-154.SNP.9:20456306 chr09:020456306 0 W/20456306-20456306 FN-154 Single Base Substitution A-C INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN577-S.SNP.9:20463280 chr09:020463280 0 W/20463280-20463280 FN577-S Single Base Substitution C-T INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN2171-S.SNP.9:20467117 chr09:020467117 0 W/20467117-20467117 FN2171-S SNP A -> T AC=1;AN=168;BQB=0.00545708;DP=3496;DP4=1977,1488,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.20465e-07;MQSB=0.994209;RPB=0.894578;SGB=-64.9298;VDB=0.0617461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.9:20484284 chr09:020484284 0 W/20484284-20484284 FN-66 Single Base Substitution C-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN3843-S.SNP.9:20484694 chr09:020484694 0 W/20484694-20484694 FN3843-S SNP A -> T AC=1;AN=190;BQB=0.724583;DP=2646;DP4=1349,1190,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00238169;MQSB=0.890965;RPB=0.900263;SGB=18.3316;VDB=0.740326;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.9:20484989 chr09:020484989 0 W/20484989-20484989 FN3298-S SNP G -> T AC=1;AN=184;BQB=0.639628;DP=3476;DP4=1351,1958,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.58248e-06;MQSB=0.699664;RPB=0.986668;SGB=-2.32838;VDB=0.264185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.9:20490214 chr09:020490214 0 W/20490214-20490214 FN3721-S SNP G -> T AC=1;AN=190;BQB=0.59721;DP=2764;DP4=1213,1436,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41842e-08;MQSB=0.969429;RPB=0.999651;SGB=53.8699;VDB=0.303136;EFF=INTERGENIC(MODIFIER||||||||||1) FN979-S.SNP.9:20490430 chr09:020490430 0 W/20490430-20490430 FN979-S Single Base Substitution A-G INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2338.SNP.9:20490842 chr09:020490842 0 W/20490842-20490842 FN2338 SNP T -> A AC=1;AN=192;BQB=0.339461;DP=5226;DP4=2563,2368,20,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.36836e-18;MQSB=0.636526;RPB=0.443341;SGB=46.4635;VDB=0.328742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.9:20504493 chr09:020504493 0 W/20504493-20504493 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.994564;DP=1892;DP4=890,869,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000138558;MQSB=0.501855;RPB=0.577832;SGB=35.4339;VDB=0.584965;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.9:20505028 chr09:020505028 0 W/20505028-20505028 W313-1-1-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2106-S.SNP.9:20513906 chr09:020513906 0 W/20513906-20513906 FN2106-S SNP A -> T AC=2;AN=168;BQB=0.980257;DP=3586;DP4=1729,1792,25,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.78154e-23;MQSB=0.964674;RPB=0.192781;SGB=45.6844;VDB=0.374528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.9:20515514 chr09:020515514 0 W/20515514-20515514 FN3360-S SNP G -> A AC=1;AN=184;BQB=0.880951;DP=3393;DP4=2082,1186,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.42466e-13;MQSB=0.990439;RPB=0.313537;SGB=89.4385;VDB=0.734175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1646-S.SNP.9:20519470 chr09:020519470 0 W/20519470-20519470 FN1646-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN-258.SNP.9:20526973 chr09:020526973 0 W/20526973-20526973 FN-258 Single Base Substitution G-A INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2533-S.SNP.9:20533222 chr09:020533222 0 W/20533222-20533222 FN2533-S SNP C -> T AC=2;AN=198;BQB=0.715594;DP=4040;DP4=1858,1905,17,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.31292e-18;MQSB=0.892463;RPB=0.55868;SGB=30.086;VDB=0.709048;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.9:20536862 chr09:020536862 0 W/20536862-20536862 W472-5-1 Single Base Substitution T-G INTRON HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN565-S.SNP.9:20540193 chr09:020540193 0 W/20540193-20540193 FN565-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN-55.SNP.9:20544979 chr09:020544979 0 W/20544979-20544979 FN-55 Single Base Substitution G-C INTRON HOMO SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN424-S.SNP.9:20548518 chr09:020548518 0 W/20548518-20548518 FN424-S Single Base Substitution A-G INTERGENIC HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN3374-S.SNP.9:20563809 chr09:020563809 0 W/20563809-20563809 FN3374-S SNP C -> T AC=2;AN=184;BQB=0.999767;DP=3015;DP4=1506,1371,30,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.64276e-22;MQSB=0.787232;RPB=0.514599;SGB=184.396;VDB=0.875196;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.9:20564719 chr09:020564719 0 W/20564719-20564719 FN2456 SNP T -> A AC=1;AN=200;BQB=0.961768;DP=4931;DP4=2724,1878,14,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.77452e-09;MQSB=0.985119;RPB=0.820093;SGB=47.4799;VDB=0.578992;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN-366 Single Base Substitution A-T INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1499-S.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN1499-S Single Base Substitution A-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2178-S.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN2178-S SNP A -> T AC=2;AN=168;BQB=0.198615;DP=3483;DP4=1719,1674,32,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.02786e-18;MQSB=0.999438;RPB=0.953926;SGB=-311.428;VDB=0.465133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN3591-S SNP A -> T AC=2;AN=188;BQB=0.999001;DP=3111;DP4=1525,1436,14,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.27446e-13;MQSB=0.959161;RPB=0.957003;SGB=85.5904;VDB=0.425821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN3687-S SNP A -> T AC=1;AN=190;BQB=0.881525;DP=3069;DP4=1574,1331,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.15493e-09;MQSB=0.385644;RPB=0.428225;SGB=46.7622;VDB=0.908907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.9:20564720 chr09:020564720 0 W/20564720-20564720 FN3844-S SNP A -> T AC=2;AN=190;BQB=0.863939;DP=3130;DP4=1516,1432,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.24532e-15;MQSB=0.862095;RPB=0.364737;SGB=135.619;VDB=0.373147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.9:20566922 chr09:020566922 0 W/20566922-20566922 FN3526-S SNP C -> T AC=1;AN=188;BQB=0.689023;DP=2823;DP4=1504,1263,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0001575;MQSB=0.195902;RPB=0.93917;SGB=35.3493;VDB=0.743634;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.9:20575411 chr09:020575411 0 W/20575411-20575411 FN-170 Single Base Substitution C-T INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN547-S.SNP.9:20581823 chr09:020581823 0 W/20581823-20581823 FN547-S Single Base Substitution T-C INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN409-S.SNP.9:20584643 chr09:020584643 0 W/20584643-20584643 FN409-S Single Base Substitution C-G INTERGENIC HOMO SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3283-S.SNP.9:20592152 chr09:020592152 0 W/20592152-20592152 FN3283-S SNP A -> G AC=1;AN=184;BQB=0.99756;DP=2841;DP4=1388,1318,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.34923e-07;MQSB=0.475717;RPB=0.457981;SGB=28.7043;VDB=0.29105;EFF=INTRON(MODIFIER||||454|LOC_Os09g35790|protein_coding|CODING|LOC_Os09g35790.1|2|1),INTRON(MODIFIER||||103|LOC_Os09g35790|protein_coding|CODING|LOC_Os09g35790.3|1|1) FN3503-S.SNP.9:20596358 chr09:020596358 0 W/20596358-20596358 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.0640045;DP=2586;DP4=1474,992,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000386698;MQB=2.08952e-05;MQSB=0.712072;RPB=0.649512;SGB=-18.2595;VDB=0.150505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.9:20604516 chr09:020604516 0 W/20604516-20604516 FN2421 SNP C -> A AC=1;AN=200;BQB=0.723293;DP=4762;DP4=2343,2093,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209996;MQB=7.85461e-10;MQSB=0.978973;RPB=0.999995;SGB=-12.5051;VDB=0.107643;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.9:20613080 chr09:020613080 0 W/20613080-20613080 FN626-S Single Base Substitution G-A INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN2656-S.SNP.9:20613353 chr09:020613353 0 W/20613353-20613353 FN2656-S SNP A -> C AC=1;AN=200;BQB=0.861008;DP=4326;DP4=2209,1857,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76164e-15;MQSB=0.846886;RPB=0.998737;SGB=76.3213;VDB=0.370529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.9:20624886 chr09:020624886 0 W/20624886-20624886 FN2598-S SNP G -> A AC=2;AN=198;BQB=0.398319;DP=4333;DP4=2016,1988,26,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.50408e-23;MQSB=0.82236;RPB=0.97762;SGB=169.573;VDB=0.341907;EFF=INTRON(MODIFIER||||158|LOC_Os09g35830|protein_coding|CODING|LOC_Os09g35830.4|6|1),INTRON(MODIFIER||||135|LOC_Os09g35830|protein_coding|CODING|LOC_Os09g35830.1|9|1),INTRON(MODIFIER||||116|LOC_Os09g35830|protein_coding|CODING|LOC_Os09g35830.2|9|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||158|LOC_Os09g35830|protein_coding|CODING|LOC_Os09g35830.3|6|1) FN1287-S.SNP.9:20627322 chr09:020627322 0 W/20627322-20627322 FN1287-S Single Base Substitution G-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN-409.SNP.9:20644583 chr09:020644583 0 W/20644583-20644583 FN-409 Single Base Substitution T-A INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN565-S.SNP.9:20646050 chr09:020646050 0 W/20646050-20646050 FN565-S Single Base Substitution G-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN774-S.SNP.9:20646125 chr09:020646125 0 W/20646125-20646125 FN774-S Single Base Substitution T-C INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN520-S.SNP.9:20652052 chr09:020652052 0 W/20652052-20652052 FN520-S Single Base Substitution T-A INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN4272-S.SNP.9:20652700 chr09:020652700 0 W/20652700-20652700 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.464446;DP=2835;DP4=1338,1376,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46059e-08;MQSB=0.970795;RPB=0.992609;SGB=8.66042;VDB=0.376758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.9:20652834 chr09:020652834 0 W/20652834-20652834 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.943394;DP=2735;DP4=1254,1359,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62329e-06;MQSB=0.984553;RPB=0.998635;SGB=35.1773;VDB=0.796894;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.9:20654288 chr09:020654288 0 W/20654288-20654288 FN576-S Single Base Substitution G-A INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3563-S.SNP.9:20655804 chr09:020655804 0 W/20655804-20655804 FN3563-S SNP G -> A AC=2;AN=188;BQB=0.997038;DP=2667;DP4=1352,1229,19,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.11603e-24;MQSB=0.827715;RPB=0.962533;SGB=154.316;VDB=0.372641;EFF=INTRON(MODIFIER||||862|LOC_Os09g35890|protein_coding|CODING|LOC_Os09g35890.1|4|1),INTRON(MODIFIER||||678|LOC_Os09g35890|protein_coding|CODING|LOC_Os09g35890.2|4|1) FN3710-S.SNP.9:20664709 chr09:020664709 0 W/20664709-20664709 FN3710-S SNP G -> T AC=1;AN=190;BQB=0.970616;DP=2876;DP4=1400,1375,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.75971e-05;MQSB=0.639301;RPB=0.862596;SGB=35.4339;VDB=0.794121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.9:20666369 chr09:020666369 0 W/20666369-20666369 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.926454;DP=2858;DP4=1441,1218,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.19241e-08;MQSB=0.693633;RPB=0.173219;SGB=62.3078;VDB=0.43361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.9:20671038 chr09:020671038 0 W/20671038-20671038 FN2485 SNP T -> A AC=1;AN=200;BQB=0.306822;DP=4220;DP4=1798,2070,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51941e-08;MQSB=0.337644;RPB=0.988278;SGB=39.9056;VDB=0.688488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.9:20677536 chr09:020677536 0 W/20677536-20677536 FN1452-S Single Base Substitution G-A INTRON HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN1276-S.SNP.9:20687753 chr09:020687753 0 W/20687753-20687753 FN1276-S Single Base Substitution A-T INTERGENIC HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN_955-1.SNP.9:20691255 chr09:020691255 0 W/20691255-20691255 FN_955-1 Single Base Substitution T-G HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN4082-S.SNP.9:20693791 chr09:020693791 0 W/20693791-20693791 FN4082-S SNP G -> A AC=1;AN=182;BQB=0.999953;DP=3191;DP4=1810,1271,15,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.78269e-13;MQSB=0.947705;RPB=0.681148;SGB=84.7091;VDB=0.196109;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.9:20704349 chr09:020704349 0 W/20704349-20704349 FN771-S Single Base Substitution G-T INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1485-S.SNP.9:20706208 chr09:020706208 0 W/20706208-20706208 FN1485-S Single Base Substitution A-G INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN-335.SNP.9:20708310 chr09:020708310 0 W/20708310-20708310 FN-335 Single Base Substitution G-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-335.SNP.9:20708311 chr09:020708311 0 W/20708311-20708311 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3283-S.SNP.9:20716314 chr09:020716314 0 W/20716314-20716314 FN3283-S SNP T -> C AC=1;AN=184;BQB=0.940585;DP=2235;DP4=909,1256,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.98009e-05;MQSB=0.833996;RPB=0.518081;SGB=5.62295;VDB=0.817761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.9:20722068 chr09:020722068 0 W/20722068-20722068 FN1211-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN500-S.SNP.9:20723919 chr09:020723919 0 W/20723919-20723919 FN500-S Single Base Substitution G-T INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3394-S.SNP.9:20726018 chr09:020726018 0 W/20726018-20726018 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.853042;DP=3334;DP4=1753,1481,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44786e-10;MQSB=0.857704;RPB=0.673093;SGB=25.7969;VDB=0.641471;EFF=INTRON(MODIFIER||||324|LOC_Os09g35970|protein_coding|CODING|LOC_Os09g35970.1|2|1) FN2418.SNP.9:20744760 chr09:020744760 0 W/20744760-20744760 FN2418 SNP A -> G AC=1;AN=200;BQB=0.790016;DP=4335;DP4=2419,1731,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000222463;MQSB=0.998374;RPB=0.548173;SGB=18.639;VDB=0.920438;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.9:20759320 chr09:020759320 0 W/20759320-20759320 FN-237 Single Base Substitution T-A INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2086-S.SNP.9:20764025 chr09:020764025 0 W/20764025-20764025 FN2086-S SNP A -> T AC=1;AN=168;BQB=0.48124;DP=3761;DP4=1420,2290,13,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.76107e-18;MQSB=0.978347;RPB=0.583519;SGB=-48.0427;VDB=0.257736;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.9:20764755 chr09:020764755 0 W/20764755-20764755 FN4325-S SNP C -> T AC=1;AN=170;BQB=0.480193;DP=2759;DP4=1579,1108,9,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000228673;MQSB=0.998243;RPB=0.833984;SGB=31.4354;VDB=0.941134;EFF=INTRON(MODIFIER||||515|LOC_Os09g36060|protein_coding|CODING|LOC_Os09g36060.1|1|1) FN463-S.SNP.9:20772002 chr09:020772002 0 W/20772002-20772002 FN463-S Single Base Substitution T-A INTERGENIC HET SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2139-S.SNP.9:20772398 chr09:020772398 0 W/20772398-20772398 FN2139-S SNP T -> C AC=1;AN=168;BQB=0.731484;DP=3717;DP4=1816,1865,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.5469e-07;MQSB=0.999822;RPB=0.192553;SGB=-36.659;VDB=0.114111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.9:20775911 chr09:020775911 0 W/20775911-20775911 FN1338-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os09g36080 cytochrome P450, putative, expressed SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-262.SNP.9:20775965 chr09:020775965 0 W/20775965-20775965 FN-262 Single Base Substitution A-T UTR_3_PRIME HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3324-S.SNP.9:20778511 chr09:020778511 0 W/20778511-20778511 FN3324-S SNP G -> A AC=1;AN=184;BQB=0.996076;DP=3338;DP4=1520,1730,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39181e-08;MQSB=0.97783;RPB=0.710597;SGB=62.3078;VDB=0.227355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D15N|1835|LOC_Os09g36090|protein_coding|CODING|LOC_Os09g36090.1|1|1) FN-386.SNP.9:20782200 chr09:020782200 0 W/20782200-20782200 FN-386 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g36090 plus-3 domain containing protein, expressed SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2155-S.SNP.9:20783748 chr09:020783748 0 W/20783748-20783748 FN2155-S SNP A -> T AC=1;AN=168;BQB=0.0718284;DP=3498;DP4=1763,1700,8,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.97555e-13;MQSB=0.975151;RPB=0.914977;SGB=-12.7876;VDB=0.887511;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctT|L1065|1835|LOC_Os09g36090|protein_coding|CODING|LOC_Os09g36090.1|9|1) FN3663-S.SNP.9:20791763 chr09:020791763 0 W/20791763-20791763 FN3663-S SNP A -> G AC=1;AN=190;BQB=0.911051;DP=2703;DP4=1462,1117,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.27257e-08;MQSB=0.982784;RPB=0.455371;SGB=49.0954;VDB=0.343517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2430.SNP.9:20792149 chr09:020792149 0 W/20792149-20792149 FN2430 SNP G -> A AC=1;AN=200;BQB=0.294032;DP=5023;DP4=2491,2260,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.14609e-13;MQSB=0.832778;RPB=0.904939;SGB=37.3004;VDB=0.684631;EFF=INTERGENIC(MODIFIER||||||||||1) FN491-S.SNP.9:20793606 chr09:020793606 0 W/20793606-20793606 FN491-S Single Base Substitution T-A INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN3309-S.SNP.9:20793607 chr09:020793607 0 W/20793607-20793607 FN3309-S SNP A -> T AC=1;AN=184;BQB=0.957796;DP=2425;DP4=1058,1217,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000412371;MQB=3.16906e-06;MQSB=0.981642;RPB=0.998836;SGB=2.23696;VDB=0.635603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.9:20793607 chr09:020793607 0 W/20793607-20793607 FN3509-S SNP A -> T AC=1;AN=188;BQB=0.999329;DP=2331;DP4=1008,1195,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000429;MQB=7.4704e-07;MQSB=0.965803;RPB=0.967579;SGB=-2.17824;VDB=0.52194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.9:20802058 chr09:020802058 0 W/20802058-20802058 FN2243-S SNP G -> T AC=1;AN=190;BQB=0.344045;DP=5182;DP4=2537,2294,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000192976;MQB=1.25546e-09;MQSB=0.933962;RPB=0.553527;SGB=64.5316;VDB=0.957276;EFF=INTRON(MODIFIER||||329|LOC_Os09g36130|protein_coding|CODING|LOC_Os09g36130.1|2|1) FN893-S.SNP.9:20804447 chr09:020804447 0 W/20804447-20804447 FN893-S Single Base Substitution A-C INTERGENIC HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. 703-1.SNP.9:20808770 chr09:020808770 0 W/20808770-20808770 703-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1450, Mutant_ID: 703-1, Generation: M2, Mutations: 30, Genes: 28, Seed availability: No. FN4107-S.SNP.9:20809120 chr09:020809120 0 W/20809120-20809120 FN4107-S SNP C -> T AC=1;AN=182;BQB=0.986039;DP=3048;DP4=1604,1334,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.60554e-07;MQSB=0.96075;RPB=0.911894;SGB=35.6277;VDB=0.691791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.9:20817149 chr09:020817149 0 W/20817149-20817149 FN2768-S SNP C -> T AC=2;AN=198;BQB=0.989532;DP=3104;DP4=1258,1583,10,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.76945e-12;MQSB=0.999941;RPB=0.921464;SGB=100.095;VDB=0.755484;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.9:20820374 chr09:020820374 0 W/20820374-20820374 FN4271-S SNP T -> C AC=1;AN=170;BQB=0.913673;DP=2615;DP4=1261,1247,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.79468e-07;MQSB=0.909088;RPB=0.579188;SGB=38.987;VDB=0.309361;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.9:20822657 chr09:020822657 0 W/20822657-20822657 FN2157-S SNP C -> T AC=1;AN=168;BQB=0.794606;DP=3303;DP4=1610,1551,93,14;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.117166;MQB=8.28869e-22;MQSB=1.2765e-15;RPB=2.18777e-07;SGB=-1800.37;VDB=0.108806;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.9:20824118 chr09:020824118 0 W/20824118-20824118 FN1725-S SNP G -> A AC=1;AN=188;BQB=0.0287507;DP=4262;DP4=2248,1975,17,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000469263;MQB=2.76377e-16;MQSB=0.999188;RPB=0.529113;SGB=-135.175;VDB=0.880986;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.9:20826765 chr09:020826765 0 W/20826765-20826765 FN1345-S Single Base Substitution T-A INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1115-S.SNP.9:20828806 chr09:020828806 0 W/20828806-20828806 FN1115-S Single Base Substitution C-T INTRON HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3440-S.SNP.9:20842347 chr09:020842347 0 W/20842347-20842347 FN3440-S SNP G -> A AC=2;AN=184;BQB=0.99984;DP=2632;DP4=1119,1388,19,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.25608e-21;MQSB=0.778371;RPB=0.577523;SGB=170.831;VDB=0.723012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.9:20842492 chr09:020842492 0 W/20842492-20842492 FN3800-S SNP T -> A AC=1;AN=190;BQB=0.994103;DP=2965;DP4=1244,1541,16,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.45913e-10;MQSB=0.952359;RPB=0.99858;SGB=10.3266;VDB=0.968383;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.9:20842683 chr09:020842683 0 W/20842683-20842683 FN2202-S SNP G -> T AC=1;AN=190;BQB=0.991488;DP=4619;DP4=2314,1997,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.78244e-11;MQSB=0.969441;RPB=0.998927;SGB=85.5263;VDB=0.972154;EFF=INTERGENIC(MODIFIER||||||||||1) FN601-S.SNP.9:20847694 chr09:020847694 0 W/20847694-20847694 FN601-S Single Base Substitution A-G INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1617-S.SNP.9:20848685 chr09:020848685 0 W/20848685-20848685 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN3821-S.SNP.9:20849667 chr09:020849667 0 W/20849667-20849667 FN3821-S SNP G -> A AC=1;AN=190;BQB=0.455739;DP=2921;DP4=1300,1493,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05202e-08;MQSB=0.231547;RPB=0.333337;SGB=28.7675;VDB=0.702177;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.9:20850642 chr09:020850642 0 W/20850642-20850642 FN740-S Single Base Substitution G-A INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN457-S.SNP.9:20852245 chr09:020852245 0 W/20852245-20852245 FN457-S Single Base Substitution T-C INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN4160-S.SNP.9:20856690 chr09:020856690 0 W/20856690-20856690 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.843143;DP=2096;DP4=879,1138,6,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.44607e-10;MQSB=0.967283;RPB=0.613819;SGB=83.4133;VDB=0.0192733;EFF=INTRON(MODIFIER||||1080|LOC_Os09g36180|protein_coding|CODING|LOC_Os09g36180.1|10|1) FN1483-S.SNP.9:20857958 chr09:020857958 0 W/20857958-20857958 FN1483-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os09g36180 glycosyl transferase family 8 protein, expressed SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1439-S.SNP.9:20868289 chr09:020868289 0 W/20868289-20868289 FN1439-S Single Base Substitution T-G INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN1076-S.SNP.9:20871298 chr09:020871298 0 W/20871298-20871298 FN1076-S Single Base Substitution C-A INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN763-S.SNP.9:20871973 chr09:020871973 0 W/20871973-20871973 FN763-S Single Base Substitution A-T INTERGENIC HET SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2734-S.SNP.9:20872499 chr09:020872499 0 W/20872499-20872499 FN2734-S SNP C -> A AC=1;AN=200;BQB=0.184162;DP=4988;DP4=2440,2288,16,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.22693e-21;MQSB=0.863022;RPB=0.995842;SGB=78.9831;VDB=0.405232;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.9:20875498 chr09:020875498 0 W/20875498-20875498 FN460-S Single Base Substitution C-T INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1514-S.SNP.9:20875543 chr09:020875543 0 W/20875543-20875543 FN1514-S Single Base Substitution T-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN_955-1.SNP.9:20875552 chr09:020875552 0 W/20875552-20875552 FN_955-1 Single Base Substitution G-A HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN512-S.SNP.9:20883495 chr09:020883495 0 W/20883495-20883495 FN512-S Single Base Substitution A-G INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1375-S.SNP.9:20895511 chr09:020895511 0 W/20895511-20895511 FN1375-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN-123.SNP.9:20900883 chr09:020900883 0 W/20900883-20900883 FN-123 Single Base Substitution A-G INTRON HOMO SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN4040-S.SNP.9:20901199 chr09:020901199 0 W/20901199-20901199 FN4040-S SNP C -> T AC=1;AN=168;BQB=0.667119;DP=2517;DP4=1144,1303,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.50092e-05;MQSB=0.993663;RPB=0.0202637;SGB=17.5943;VDB=0.364656;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F477|695|LOC_Os09g36240|protein_coding|CODING|LOC_Os09g36240.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F477|695|LOC_Os09g36240|protein_coding|CODING|LOC_Os09g36240.3|8|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F477|613|LOC_Os09g36240|protein_coding|CODING|LOC_Os09g36240.4|8|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F477|519|LOC_Os09g36240|protein_coding|CODING|LOC_Os09g36240.2|8|1) FN1545-S.SNP.9:20902887 chr09:020902887 0 W/20902887-20902887 FN1545-S Single Base Substitution A-G SYNONYMOUS_CODING Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2774-S.SNP.9:20914093 chr09:020914093 0 W/20914093-20914093 FN2774-S SNP G -> A AC=1;AN=198;BQB=0.969464;DP=3725;DP4=1625,1932,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.28899e-12;MQSB=0.846451;RPB=0.956935;SGB=90.9049;VDB=0.887823;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.9:20928654 chr09:020928654 0 W/20928654-20928654 FN4087-S SNP G -> T AC=1;AN=182;BQB=0.0682977;DP=3248;DP4=1632,1261,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.91996e-06;MQSB=0.745385;RPB=0.446054;SGB=-36.3502;VDB=0.848553;EFF=UTR_5_PRIME(MODIFIER||4||904|LOC_Os09g36270|protein_coding|CODING|LOC_Os09g36270.1|1|1),UTR_5_PRIME(MODIFIER||4||715|LOC_Os09g36270|protein_coding|CODING|LOC_Os09g36270.2|1|1) FN3810-S.SNP.9:20929367 chr09:020929367 0 W/20929367-20929367 FN3810-S SNP A -> G AC=1;AN=190;BQB=0.955734;DP=2966;DP4=1436,1350,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30475e-08;MQSB=0.807955;RPB=0.5321;SGB=4.11112;VDB=0.43267;EFF=INTRON(MODIFIER||||904|LOC_Os09g36270|protein_coding|CODING|LOC_Os09g36270.1|1|1),INTRON(MODIFIER||||715|LOC_Os09g36270|protein_coding|CODING|LOC_Os09g36270.2|1|1) FN1493-S.SNP.9:20938434 chr09:020938434 0 W/20938434-20938434 FN1493-S Single Base Substitution T-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN571-S.SNP.9:20939052 chr09:020939052 0 W/20939052-20939052 FN571-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g36280 glycosyl hydrolases family 17, putative, expressed SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN678-S.SNP.9:20947062 chr09:020947062 0 W/20947062-20947062 FN678-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g36300 OsLonP4 - Putative Lon protease homologue, expressed SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2288.SNP.9:20958537 chr09:020958537 0 W/20958537-20958537 FN2288 SNP G -> A AC=1;AN=192;BQB=0.690165;DP=4425;DP4=1507,2424,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00858757;MQB=3.91323e-05;MQSB=1.29075e-06;RPB=0.661699;SGB=5.79046;VDB=0.399873;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.9:20960620 chr09:020960620 0 W/20960620-20960620 FN3759-S SNP G -> A AC=2;AN=190;BQB=0.89742;DP=2979;DP4=1427,1422,13,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.77564e-18;MQSB=0.976046;RPB=0.932714;SGB=153.834;VDB=0.475918;EFF=INTRON(MODIFIER||||114|LOC_Os09g36310|protein_coding|CODING|LOC_Os09g36310.1|1|1) FN_1017-1.SNP.9:20960620 chr09:020960620 0 W/20960620-20960620 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN343-S.SNP.9:20963004 chr09:020963004 0 W/20963004-20963004 FN343-S Single Base Substitution T-G INTRON HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2478.SNP.9:20963152 chr09:020963152 0 W/20963152-20963152 FN2478 SNP T -> C AC=1;AN=200;BQB=0.544379;DP=4260;DP4=2106,1839,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000234742;MQB=1.13881e-07;MQSB=0.0654885;RPB=0.998496;SGB=47.4799;VDB=0.762219;EFF=INTRON(MODIFIER||||406|LOC_Os09g36320|protein_coding|CODING|LOC_Os09g36320.1|3|1) FN919-S.SNP.9:20980101 chr09:020980101 0 W/20980101-20980101 FN919-S Single Base Substitution T-C INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3363-S.SNP.9:20993603 chr09:020993603 0 W/20993603-20993603 FN3363-S SNP G -> C AC=2;AN=184;BQB=0.749664;DP=3540;DP4=1557,1866,14,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.73518e-22;MQSB=0.903431;RPB=0.30535;SGB=120.271;VDB=0.647322;EFF=INTRON(MODIFIER||||532|LOC_Os09g36370|protein_coding|CODING|LOC_Os09g36370.1|7|1) FN2611-S.SNP.9:21016047 chr09:021016047 0 W/21016047-21016047 FN2611-S SNP G -> C AC=1;AN=200;BQB=0.978164;DP=4808;DP4=2385,2146,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3537e-18;MQSB=0.99974;RPB=0.292888;SGB=94.3471;VDB=0.966624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E650D|1046|LOC_Os09g36420|protein_coding|CODING|LOC_Os09g36420.1|10|1) FN2279-S.SNP.9:21019259 chr09:021019259 0 W/21019259-21019259 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.761352;DP=5222;DP4=2162,2721,28,31;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.0691306;MQB=0.955776;MQSB=3.22837e-15;RPB=0.423157;SGB=199.579;VDB=0.183775;EFF=INTRON(MODIFIER||||1046|LOC_Os09g36420|protein_coding|CODING|LOC_Os09g36420.1|16|1) FN2611-S.SNP.9:21019908 chr09:021019908 0 W/21019908-21019908 FN2611-S SNP A -> G AC=1;AN=200;BQB=0.275123;DP=4992;DP4=2496,2222,5,16;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0580929;MQB=0.0118836;MQSB=0.236454;RPB=0.858514;SGB=91.1059;VDB=0.815391;EFF=INTRON(MODIFIER||||1046|LOC_Os09g36420|protein_coding|CODING|LOC_Os09g36420.1|16|1) FN4065-S.SNP.9:21021819 chr09:021021819 0 W/21021819-21021819 FN4065-S SNP C -> T AC=1;AN=168;BQB=0.996572;DP=1959;DP4=1136,717,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47256e-05;MQSB=0.816039;RPB=0.857479;SGB=43.3113;VDB=0.480377;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.9:21023774 chr09:021023774 0 W/21023774-21023774 FN4119-S SNP C -> A AC=2;AN=182;BQB=0.982282;DP=3314;DP4=1644,1551,9,11;HOB=0.0217365;ICB=0.494567;MQ=24;MQ0F=0.253168;MQB=0.231849;MQSB=0;RPB=0.0720175;SGB=60.2037;VDB=0.149364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.9:21025382 chr09:021025382 0 W/21025382-21025382 FN3729-S SNP C -> T AC=2;AN=190;BQB=0.998951;DP=2715;DP4=1280,1298,16,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.96951e-20;MQSB=0.951992;RPB=0.139033;SGB=158.388;VDB=0.170948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.9:21034729 chr09:021034729 0 W/21034729-21034729 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.731049;DP=5083;DP4=2186,2659,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.36607e-13;MQSB=0.821943;RPB=0.24888;SGB=42.5108;VDB=0.261414;EFF=INTRON(MODIFIER||||304|LOC_Os09g36450|protein_coding|CODING|LOC_Os09g36450.1|4|1),INTRON(MODIFIER||||207|LOC_Os09g36450|protein_coding|CODING|LOC_Os09g36450.2|4|1) FN1640-S.SNP.9:21043684 chr09:021043684 0 W/21043684-21043684 FN1640-S Single Base Substitution G-T INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN-70.SNP.9:21046801 chr09:021046801 0 W/21046801-21046801 FN-70 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN417-S.SNP.9:21060326 chr09:021060326 0 W/21060326-21060326 FN417-S Single Base Substitution G-A INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2719-S.SNP.9:21061546 chr09:021061546 0 W/21061546-21061546 FN2719-S SNP C -> T AC=1;AN=200;BQB=0.724532;DP=4607;DP4=2075,2231,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16073e-10;MQSB=0.757294;RPB=0.859674;SGB=32.0901;VDB=0.902762;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V311|337|LOC_Os09g36520|protein_coding|CODING|LOC_Os09g36520.1|1|1) FN-120.SNP.9:21069534 chr09:021069534 0 W/21069534-21069534 FN-120 Single Base Substitution C-T INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1058-S.SNP.9:21069772 chr09:021069772 0 W/21069772-21069772 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2403.SNP.9:21072838 chr09:021072838 0 W/21072838-21072838 FN2403 SNP C -> A AC=1;AN=200;BQB=0.995443;DP=4157;DP4=1834,2034,2,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61853e-07;MQSB=0.988363;RPB=0.86084;SGB=45.0543;VDB=0.528324;EFF=INTRON(MODIFIER||||1678|LOC_Os09g36540|protein_coding|CODING|LOC_Os09g36540.1|4|1) FN2403.SNP.9:21072839 chr09:021072839 0 W/21072839-21072839 FN2403 SNP G -> T AC=1;AN=200;BQB=0.70099;DP=4164;DP4=1841,2071,2,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.84329e-07;MQSB=0.974389;RPB=0.643786;SGB=33.0593;VDB=0.551461;EFF=INTRON(MODIFIER||||1678|LOC_Os09g36540|protein_coding|CODING|LOC_Os09g36540.1|4|1) FN1076-S.SNP.9:21074352 chr09:021074352 0 W/21074352-21074352 FN1076-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN3631-S.SNP.9:21075081 chr09:021075081 0 W/21075081-21075081 FN3631-S SNP G -> A AC=2;AN=190;BQB=0.903316;DP=2656;DP4=1258,1276,18,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.32163e-15;MQSB=0.972952;RPB=0.0674002;SGB=112.85;VDB=0.291268;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A864T|1678|LOC_Os09g36540|protein_coding|CODING|LOC_Os09g36540.1|7|1) FN3781-S.SNP.9:21078635 chr09:021078635 0 W/21078635-21078635 FN3781-S SNP A -> G AC=2;AN=190;BQB=0.988108;DP=3364;DP4=1777,1446,16,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.41072e-21;MQSB=0.982986;RPB=0.0376504;SGB=167.496;VDB=0.211899;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.9:21083209 chr09:021083209 0 W/21083209-21083209 FN4164-S SNP T -> A AC=1;AN=170;BQB=0.982696;DP=2874;DP4=1555,1192,12,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.0869e-09;MQSB=0.988129;RPB=0.37903;SGB=65.6427;VDB=0.567444;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V244E|738|LOC_Os09g36550|protein_coding|CODING|LOC_Os09g36550.1|1|1) FN3998-S.SNP.9:21083296 chr09:021083296 0 W/21083296-21083296 FN3998-S SNP G -> A AC=1;AN=168;BQB=0.823741;DP=3258;DP4=1665,1478,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.26336e-06;MQSB=0.999364;RPB=0.996116;SGB=43.3113;VDB=0.902127;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R273Q|738|LOC_Os09g36550|protein_coding|CODING|LOC_Os09g36550.1|1|1) FN870-S.SNP.9:21085540 chr09:021085540 0 W/21085540-21085540 FN870-S Single Base Substitution T-A INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN870-S.SNP.9:21085541 chr09:021085541 0 W/21085541-21085541 FN870-S Single Base Substitution T-A INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN2450.SNP.9:21089180 chr09:021089180 0 W/21089180-21089180 FN2450 SNP C -> T AC=1;AN=200;BQB=0.863627;DP=3077;DP4=1071,1633,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00138e-06;MQSB=0.158623;RPB=0.831152;SGB=29.4541;VDB=0.736405;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A81|330|LOC_Os09g36560|protein_coding|CODING|LOC_Os09g36560.1|2|1) FN2149-S.SNP.9:21095647 chr09:021095647 0 W/21095647-21095647 FN2149-S SNP G -> T AC=1;AN=168;BQB=0.0689849;DP=3475;DP4=1966,1476,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.74489e-11;MQSB=0.957964;RPB=0.55943;SGB=-98.0622;VDB=0.214054;EFF=INTERGENIC(MODIFIER||||||||||1) FN2149-S.SNP.9:21095648 chr09:021095648 0 W/21095648-21095648 FN2149-S SNP A -> T AC=1;AN=168;BQB=0.00375338;DP=3478;DP4=1972,1469,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94751e-08;MQSB=0.967435;RPB=0.707386;SGB=-133.625;VDB=0.25233;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.9:21110604 chr09:021110604 0 W/21110604-21110604 FN1283-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3780-S.SNP.9:21116762 chr09:021116762 0 W/21116762-21116762 FN3780-S SNP T -> C AC=1;AN=190;BQB=0.199643;DP=2291;DP4=1165,990,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00436491;MQB=0.000852695;MQSB=0.0320957;RPB=0.997015;SGB=18.552;VDB=0.965278;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.9:21117664 chr09:021117664 0 W/21117664-21117664 FN3965-S SNP C -> T AC=1;AN=168;BQB=0.983598;DP=2849;DP4=1389,1317,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.002106;MQB=3.28451e-07;MQSB=0.71871;RPB=0.895734;SGB=109.773;VDB=0.573532;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S77F|1601|LOC_Os09g36610|protein_coding|CODING|LOC_Os09g36610.1|1|1) FN3533-S.SNP.9:21119084 chr09:021119084 0 W/21119084-21119084 FN3533-S SNP T -> A AC=1;AN=188;BQB=0.623996;DP=2541;DP4=1032,1401,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00590319;MQB=2.4957e-07;MQSB=0.341206;RPB=0.719916;SGB=-15.5431;VDB=0.147198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D466E|1601|LOC_Os09g36610|protein_coding|CODING|LOC_Os09g36610.1|2|1) FN2404.SNP.9:21121441 chr09:021121441 0 W/21121441-21121441 FN2404 SNP T -> C AC=1;AN=200;BQB=0.545877;DP=4251;DP4=2119,1887,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00211715;MQB=9.97341e-09;MQSB=0.896986;RPB=0.423916;SGB=40.2696;VDB=0.740922;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T1068|1601|LOC_Os09g36610|protein_coding|CODING|LOC_Os09g36610.1|5|1) FN2348.SNP.9:21122817 chr09:021122817 0 W/21122817-21122817 FN2348 SNP C -> T AC=1;AN=192;BQB=0.966113;DP=6006;DP4=2664,3032,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0865801;MQB=0.890647;MQSB=4.43822e-17;RPB=0.470268;SGB=86.1165;VDB=0.692507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1527V|1601|LOC_Os09g36610|protein_coding|CODING|LOC_Os09g36610.1|5|1) FN1205-S.SNP.9:21124211 chr09:021124211 0 W/21124211-21124211 FN1205-S Single Base Substitution A-G INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3668-S.SNP.9:21140245 chr09:021140245 0 W/21140245-21140245 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.963952;DP=2986;DP4=1474,1416,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.66936e-11;MQSB=0.909308;RPB=0.967354;SGB=50.3161;VDB=0.509204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.9:21143302 chr09:021143302 0 W/21143302-21143302 FN1123-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g36640 expressed protein SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN2421.SNP.9:21148460 chr09:021148460 0 W/21148460-21148460 FN2421 SNP G -> T AC=1;AN=200;BQB=0.974575;DP=4864;DP4=2436,2150,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50962e-12;MQSB=0.652896;RPB=0.79181;SGB=58.2954;VDB=0.916531;EFF=INTRON(MODIFIER||||615|LOC_Os09g36650|protein_coding|CODING|LOC_Os09g36650.1|4|1) FN2421.SNP.9:21148461 chr09:021148461 0 W/21148461-21148461 FN2421 SNP G -> T AC=1;AN=200;BQB=0.993134;DP=4880;DP4=2430,2170,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05569e-13;MQSB=0.602802;RPB=0.997895;SGB=14.3054;VDB=0.954107;EFF=INTRON(MODIFIER||||615|LOC_Os09g36650|protein_coding|CODING|LOC_Os09g36650.1|4|1) FN441-S.SNP.9:21154432 chr09:021154432 0 W/21154432-21154432 FN441-S Single Base Substitution C-T INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1058-S.SNP.9:21154711 chr09:021154711 0 W/21154711-21154711 FN1058-S Single Base Substitution G-C INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1553-S.SNP.9:21155288 chr09:021155288 0 W/21155288-21155288 FN1553-S Single Base Substitution G-A INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2219-S.SNP.9:21161799 chr09:021161799 0 W/21161799-21161799 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.000311356;DP=4717;DP4=2067,2074,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.0529e-09;MQSB=0.999491;RPB=0.998538;SGB=-83.8678;VDB=0.814295;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.9:21165108 chr09:021165108 0 W/21165108-21165108 FN3503-S SNP T -> A AC=1;AN=188;BQB=0.999774;DP=3331;DP4=1635,1624,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.46776e-08;MQSB=0.972659;RPB=0.197668;SGB=32.441;VDB=0.445608;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.9:21170117 chr09:021170117 0 W/21170117-21170117 FN2488 SNP G -> A AC=1;AN=200;BQB=0.991628;DP=4038;DP4=2027,1743,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.26297e-15;MQSB=0.999768;RPB=0.937216;SGB=23.9365;VDB=0.846963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.9:21181759 chr09:021181759 0 W/21181759-21181759 FN1465-S Single Base Substitution G-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN889-S.SNP.9:21185709 chr09:021185709 0 W/21185709-21185709 FN889-S Single Base Substitution A-G INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN744-S.SNP.9:21185977 chr09:021185977 0 W/21185977-21185977 FN744-S Single Base Substitution A-G INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN495-S.SNP.9:21188220 chr09:021188220 0 W/21188220-21188220 FN495-S Single Base Substitution T-G INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3372-S.SNP.9:21195065 chr09:021195065 0 W/21195065-21195065 FN3372-S SNP C -> G AC=2;AN=184;BQB=0.991484;DP=2564;DP4=1299,1166,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.91879e-14;MQSB=0.979848;RPB=0.815068;SGB=98.4821;VDB=0.678933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.9:21196033 chr09:021196033 0 W/21196033-21196033 FN2535-S SNP A -> G AC=1;AN=198;BQB=0.539853;DP=4107;DP4=1965,1877,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10834e-13;MQSB=0.994129;RPB=0.947682;SGB=68.91;VDB=0.889706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.9:21198620 chr09:021198620 0 W/21198620-21198620 FN2407 SNP G -> C AC=2;AN=200;BQB=0.902696;DP=3334;DP4=1496,1515,12,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.54644e-12;MQSB=0.80284;RPB=0.989119;SGB=61.9006;VDB=0.108963;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cCc|R262P|515|LOC_Os09g36740|protein_coding|CODING|LOC_Os09g36740.1|4|1) FN2333.SNP.9:21201415 chr09:021201415 0 W/21201415-21201415 FN2333 SNP G -> A AC=1;AN=192;BQB=0.982227;DP=4863;DP4=2369,2134,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.81195e-07;MQSB=0.998067;RPB=0.771644;SGB=18.6565;VDB=0.796206;EFF=INTRON(MODIFIER||||171|LOC_Os09g36750|protein_coding|CODING|LOC_Os09g36750.1|3|1),INTRON(MODIFIER||||109|LOC_Os09g36750|protein_coding|CODING|LOC_Os09g36750.2|3|1) FN506-S.SNP.9:21203902 chr09:021203902 0 W/21203902-21203902 FN506-S Single Base Substitution C-T INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN554-S.SNP.9:21210340 chr09:021210340 0 W/21210340-21210340 FN554-S Single Base Substitution A-G INTRON HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN-108.SNP.9:21223034 chr09:021223034 0 W/21223034-21223034 FN-108 Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN782-S.SNP.9:21235921 chr09:021235921 0 W/21235921-21235921 FN782-S Single Base Substitution G-A INTRON HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN778-S.SNP.9:21237987 chr09:021237987 0 W/21237987-21237987 FN778-S Single Base Substitution G-A INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN3691-S.SNP.9:21239487 chr09:021239487 0 W/21239487-21239487 FN3691-S SNP T -> C AC=1;AN=190;BQB=0.925814;DP=2362;DP4=688,1518,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74786e-06;MQSB=0.0175527;RPB=0.747573;SGB=26.2136;VDB=0.601875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1388-S.SNP.9:21244241 chr09:021244241 0 W/21244241-21244241 FN1388-S Single Base Substitution T-A INTRON HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN946-S.SNP.9:21245651 chr09:021245651 0 W/21245651-21245651 FN946-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN-170.SNP.9:21247932 chr09:021247932 0 W/21247932-21247932 FN-170 Single Base Substitution A-G INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN1761-S.SNP.9:21252569 chr09:021252569 0 W/21252569-21252569 FN1761-S SNP C -> T AC=1;AN=188;BQB=0.863319;DP=1752;DP4=1063,622,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000650954;MQSB=0.887775;RPB=0.902204;SGB=8.27326;VDB=0.0295463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A36T|210|LOC_Os09g36850|protein_coding|CODING|LOC_Os09g36850.1|1|1) FN1057-S.SNP.9:21253884 chr09:021253884 0 W/21253884-21253884 FN1057-S Single Base Substitution A-G INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN2652-S.SNP.9:21254558 chr09:021254558 0 W/21254558-21254558 FN2652-S SNP T -> C AC=1;AN=200;BQB=0.531507;DP=5039;DP4=2714,2097,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92061e-17;MQSB=0.91024;RPB=0.976883;SGB=63.3521;VDB=0.249342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I127V|135|LOC_Os09g36860|protein_coding|CODING|LOC_Os09g36860.1|4|1) FN2652-S.SNP.9:21254559 chr09:021254559 0 W/21254559-21254559 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.945205;DP=5026;DP4=2657,2090,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82237e-17;MQSB=0.822926;RPB=0.811879;SGB=28.752;VDB=0.335457;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L126|135|LOC_Os09g36860|protein_coding|CODING|LOC_Os09g36860.1|4|1) FN2597-S.SNP.9:21264419 chr09:021264419 0 W/21264419-21264419 FN2597-S SNP T -> C AC=1;AN=198;BQB=0.802476;DP=4027;DP4=1563,2171,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00173827;MQB=1.46483e-06;MQSB=0.106431;RPB=0.670264;SGB=21.559;VDB=0.154594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.9:21268279 chr09:021268279 0 W/21268279-21268279 FN2151-S SNP G -> A AC=1;AN=168;BQB=2.21907e-13;DP=3906;DP4=2099,1722,43,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0190708;MQSB=0.626433;RPB=6.81317e-07;SGB=-1577.33;VDB=1.31571e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN-137.SNP.9:21285010 chr09:021285010 0 W/21285010-21285010 FN-137 Single Base Substitution G-T INTERGENIC HET SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3804-S.SNP.9:21291307 chr09:021291307 0 W/21291307-21291307 FN3804-S SNP G -> C AC=1;AN=190;BQB=0.908693;DP=2403;DP4=1281,1024,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.32909e-08;MQSB=0.951725;RPB=0.999662;SGB=46.7622;VDB=0.966381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.9:21294705 chr09:021294705 0 W/21294705-21294705 FN3740-S SNP G -> A AC=1;AN=190;BQB=0.833779;DP=2961;DP4=1640,1216,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.6497e-06;MQSB=0.969628;RPB=0.289202;SGB=49.0954;VDB=0.40601;EFF=INTERGENIC(MODIFIER||||||||||1) FN685-S.SNP.9:21294720 chr09:021294720 0 W/21294720-21294720 FN685-S Single Base Substitution A-G INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN2185-S.SNP.9:21309478 chr09:021309478 0 W/21309478-21309478 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.953775;DP=4740;DP4=2407,1985,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.29307e-08;MQSB=0.0083696;RPB=0.70104;SGB=31.3213;VDB=0.531382;EFF=INTERGENIC(MODIFIER||||||||||1) FN_846-8-1.SNP.9:21313847 chr09:021313847 0 W/21313847-21313847 FN_846-8-1 Single Base Substitution A-T Homo SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN3837-S.SNP.9:21319349 chr09:021319349 0 W/21319349-21319349 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.974254;DP=2384;DP4=1248,1064,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66811e-05;MQSB=0.942471;RPB=0.0733009;SGB=18.3316;VDB=0.0288971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.9:21320248 chr09:021320248 0 W/21320248-21320248 FN2730-S SNP A -> G AC=1;AN=200;BQB=0.927452;DP=4964;DP4=2191,2661,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.50266e-06;MQSB=0.981924;RPB=0.133133;SGB=22.2439;VDB=0.945531;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.9:21338043 chr09:021338043 0 W/21338043-21338043 FN-176 Single Base Substitution A-C INTRON HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN3722-S.SNP.9:21339193 chr09:021339193 0 W/21339193-21339193 FN3722-S SNP A -> T AC=1;AN=190;BQB=0.817099;DP=3134;DP4=1426,1520,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44393e-11;MQSB=0.985926;RPB=0.995959;SGB=71.8647;VDB=0.0227879;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N454K|487|LOC_Os09g37000|protein_coding|CODING|LOC_Os09g37000.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N359K|392|LOC_Os09g37000|protein_coding|CODING|LOC_Os09g37000.2|7|1) FN2128-S.SNP.9:21350572 chr09:021350572 0 W/21350572-21350572 FN2128-S SNP T -> C AC=2;AN=168;BQB=0.802603;DP=2621;DP4=1368,1170,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.74705e-17;MQSB=0.999802;RPB=0.871482;SGB=-90.0367;VDB=0.820504;EFF=INTRON(MODIFIER||||513|LOC_Os09g37012|protein_coding|CODING|LOC_Os09g37012.1|1|1) FN1754-S.SNP.9:21356929 chr09:021356929 0 W/21356929-21356929 FN1754-S SNP G -> T AC=1;AN=188;BQB=0.401216;DP=3828;DP4=1738,2050,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.53907e-08;MQSB=0.901151;RPB=0.651233;SGB=-63.3592;VDB=0.258157;EFF=INTRON(MODIFIER||||242|LOC_Os09g37020|protein_coding|CODING|LOC_Os09g37020.1|1|1),INTRON(MODIFIER||||237|LOC_Os09g37020|protein_coding|CODING|LOC_Os09g37020.3|1|1) FN4151-S.SNP.9:21359709 chr09:021359709 0 W/21359709-21359709 FN4151-S SNP A -> T AC=1;AN=170;BQB=0.84231;DP=2732;DP4=1191,1077,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=1.02434e-06;MQSB=0.00701015;RPB=0.320436;SGB=47.8722;VDB=0.0711401;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.9:21362821 chr09:021362821 0 W/21362821-21362821 FN-221 Single Base Substitution C-G INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3105-S.SNP.9:21378480 chr09:021378480 0 W/21378480-21378480 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.62345;DP=2918;DP4=1224,1611,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.60421e-07;MQSB=0.995796;RPB=0.998281;SGB=18.2315;VDB=0.914754;EFF=UTR_5_PRIME(MODIFIER||61||482|LOC_Os09g37060|protein_coding|CODING|LOC_Os09g37060.1|1|1) FN774-S.SNP.9:21382012 chr09:021382012 0 W/21382012-21382012 FN774-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os09g37070 pentatricopeptide, putative, expressed SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1394-S.SNP.9:21387400 chr09:021387400 0 W/21387400-21387400 FN1394-S Single Base Substitution A-G INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN1184-S.SNP.9:21398825 chr09:021398825 0 W/21398825-21398825 FN1184-S Single Base Substitution A-G INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1295-S.SNP.9:21398825 chr09:021398825 0 W/21398825-21398825 FN1295-S Single Base Substitution A-G INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1570-S.SNP.9:21398825 chr09:021398825 0 W/21398825-21398825 FN1570-S Single Base Substitution A-G INTERGENIC Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN2379.SNP.9:21398825 chr09:021398825 0 W/21398825-21398825 FN2379 SNP A -> G AC=1;AN=192;BQB=0.425874;DP=4977;DP4=2690,1946,16,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.91609e-22;MQSB=0.411609;RPB=0.959766;SGB=-44.4765;VDB=0.151683;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.9:21398825 chr09:021398825 0 W/21398825-21398825 FN3487-S SNP A -> G AC=1;AN=184;BQB=0.842129;DP=4035;DP4=2367,1389,17,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.90629e-12;MQSB=0.978657;RPB=0.180389;SGB=-8.45255;VDB=0.805302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2171-S.SNP.9:21401682 chr09:021401682 0 W/21401682-21401682 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.265621;DP=3551;DP4=1959,1546,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.53535e-07;MQSB=0.98902;RPB=0.99622;SGB=-63.3606;VDB=0.369016;EFF=INTRON(MODIFIER||||487|LOC_Os09g37110|protein_coding|CODING|LOC_Os09g37110.1|1|1) FN774-S.SNP.9:21405485 chr09:021405485 0 W/21405485-21405485 FN774-S Single Base Substitution G-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1665-S.SNP.9:21407738 chr09:021407738 0 W/21407738-21407738 FN1665-S Single Base Substitution C-T INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN854-S.SNP.9:21408784 chr09:021408784 0 W/21408784-21408784 FN854-S Single Base Substitution A-C INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN3456-S.SNP.9:21410208 chr09:021410208 0 W/21410208-21410208 FN3456-S SNP C -> T AC=2;AN=184;BQB=0.993726;DP=3354;DP4=1480,1740,8,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19827e-13;MQSB=0.997335;RPB=0.615201;SGB=112.047;VDB=0.206736;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S97N|408|LOC_Os09g37120|protein_coding|CODING|LOC_Os09g37120.1|1|1) FN944-S.SNP.9:21410884 chr09:021410884 0 W/21410884-21410884 FN944-S Single Base Substitution G-A INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN-173.SNP.9:21411549 chr09:021411549 0 W/21411549-21411549 FN-173 Single Base Substitution T-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN550-S.SNP.9:21413479 chr09:021413479 0 W/21413479-21413479 FN550-S Single Base Substitution G-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN550-S.SNP.9:21413480 chr09:021413480 0 W/21413480-21413480 FN550-S Single Base Substitution T-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN432-S.SNP.9:21414912 chr09:021414912 0 W/21414912-21414912 FN432-S Single Base Substitution C-G INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1212-S.SNP.9:21419153 chr09:021419153 0 W/21419153-21419153 FN1212-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2299.SNP.9:21419153 chr09:021419153 0 W/21419153-21419153 FN2299 SNP G -> A AC=1;AN=192;BQB=0.0264374;DP=2283;DP4=206,1914,1,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.74633e-07;MQSB=0.949417;RPB=0.162199;SGB=1.09742;VDB=0.636384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.9:21419153 chr09:021419153 0 W/21419153-21419153 FN3512-S SNP G -> A AC=2;AN=188;BQB=0.944757;DP=1318;DP4=10,1259,0,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.23079e-07;MQSB=0.117285;RPB=0.275871;SGB=32.441;VDB=0.819703;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.9:21419153 chr09:021419153 0 W/21419153-21419153 W246-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN-272.SNP.9:21424037 chr09:021424037 0 W/21424037-21424037 FN-272 Single Base Substitution G-A INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1746-S.SNP.9:21424037 chr09:021424037 0 W/21424037-21424037 FN1746-S SNP G -> A AC=2;AN=188;BQB=0.997132;DP=3134;DP4=1344,1716,24,24;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00638162;MQB=4.66402e-17;MQSB=0.631123;RPB=0.602726;SGB=54.9236;VDB=0.352107;EFF=INTERGENIC(MODIFIER||||||||||1) FN531-S.SNP.9:21424037 chr09:021424037 0 W/21424037-21424037 FN531-S Single Base Substitution G-A INTERGENIC HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN4009-S.SNP.9:21426316 chr09:021426316 0 W/21426316-21426316 FN4009-S SNP C -> T AC=1;AN=168;BQB=0.986225;DP=2508;DP4=1227,1175,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0127592;MQB=0.0558517;MQSB=0.65705;RPB=0.114997;SGB=27.8864;VDB=0.119856;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.9:21427272 chr09:021427272 0 W/21427272-21427272 FN1062-S Single Base Substitution C-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2313.SNP.9:21436017 chr09:021436017 0 W/21436017-21436017 FN2313 SNP C -> G AC=1;AN=192;BQB=0.697477;DP=5724;DP4=2254,2841,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=15;MQ0F=0.41754;MQB=0.00905141;MQSB=0;RPB=0.21432;SGB=85.7252;VDB=0.558744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L671V|1045|LOC_Os09g37160|protein_coding|CODING|LOC_Os09g37160.1|2|1) FN3453-S.SNP.9:21438288 chr09:021438288 0 W/21438288-21438288 FN3453-S SNP C -> G AC=1;AN=184;BQB=0.998151;DP=3762;DP4=1828,1749,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.0999468;MQB=0.514387;MQSB=0.000121569;RPB=0.806741;SGB=32.2261;VDB=0.154023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K1667N|1836|LOC_Os09g37170|protein_coding|CODING|LOC_Os09g37170.1|3|1) FN_546-3-1.SNP.9:21447484 chr09:021447484 0 W/21447484-21447484 FN_546-3-1 Single Base Substitution T-C Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN511-S.SNP.9:21448658 chr09:021448658 0 W/21448658-21448658 FN511-S Single Base Substitution G-T INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN2376.SNP.9:21452667 chr09:021452667 0 W/21452667-21452667 FN2376 SNP T -> A AC=1;AN=192;BQB=0.0665633;DP=4885;DP4=2624,1892,6,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000166098;MQSB=0.817118;RPB=0.0496741;SGB=-33.5852;VDB=0.0475124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.9:21455976 chr09:021455976 0 W/21455976-21455976 FN2175-S SNP C -> T AC=2;AN=168;BQB=0.0607367;DP=2776;DP4=1431,1284,10,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.49273e-08;MQSB=0.917274;RPB=0.994034;SGB=11.3448;VDB=0.173619;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.9:21456678 chr09:021456678 0 W/21456678-21456678 FN2187-S SNP T -> G AC=1;AN=190;BQB=0.777014;DP=5221;DP4=2077,2753,5,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57182e-13;MQSB=0.366222;RPB=0.278508;SGB=19.6499;VDB=0.0674875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.9:21457313 chr09:021457313 0 W/21457313-21457313 FN2175-S SNP C -> A AC=2;AN=168;BQB=0.175924;DP=3329;DP4=2066,1207,26,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.26237e-14;MQSB=0.984974;RPB=0.999847;SGB=-176.456;VDB=0.487345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1411-S.SNP.9:21462488 chr09:021462488 0 W/21462488-21462488 FN1411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN1411-S.SNP.9:21462490 chr09:021462490 0 W/21462490-21462490 FN1411-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN581-S.SNP.9:21492108 chr09:021492108 0 W/21492108-21492108 FN581-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g37230 protein kinase family protein, putative, expressed SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN521-S.SNP.9:21496986 chr09:021496986 0 W/21496986-21496986 FN521-S Single Base Substitution C-T INTRON HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN4099-S.SNP.9:21504183 chr09:021504183 0 W/21504183-21504183 FN4099-S SNP T -> G AC=1;AN=182;BQB=0.973704;DP=2597;DP4=1346,1163,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00038506;MQB=7.94984e-07;MQSB=0.21082;RPB=0.886617;SGB=57.644;VDB=0.347979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S2053A|4303|LOC_Os09g37240|protein_coding|CODING|LOC_Os09g37240.1|3|1) FN1520-S.SNP.9:21517143 chr09:021517143 0 W/21517143-21517143 FN1520-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g37250 high mobility group, putative, expressed SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1366-S.SNP.9:21517927 chr09:021517927 0 W/21517927-21517927 FN1366-S Single Base Substitution T-G INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN_1017-1.SNP.9:21523499 chr09:021523499 0 W/21523499-21523499 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN1496-S.SNP.9:21524495 chr09:021524495 0 W/21524495-21524495 FN1496-S Single Base Substitution A-C INTRON HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN4305-S.SNP.9:21531290 chr09:021531290 0 W/21531290-21531290 FN4305-S SNP A -> G AC=2;AN=170;BQB=0.818516;DP=2437;DP4=1278,1084,15,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.83619e-12;MQSB=0.874186;RPB=0.994313;SGB=69.3045;VDB=0.603822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.9:21533081 chr09:021533081 0 W/21533081-21533081 FN3849-S SNP C -> T AC=2;AN=158;BQB=0.72694;DP=2249;DP4=1026,1114,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.12179e-10;MQSB=0.8198;RPB=0.65237;SGB=35.6659;VDB=0.136664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.9:21534651 chr09:021534651 0 W/21534651-21534651 FN2397 SNP G -> A AC=2;AN=200;BQB=0.899891;DP=4737;DP4=2398,2037,25,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000211104;MQB=1.91988e-26;MQSB=0.388132;RPB=0.734238;SGB=110.245;VDB=0.55151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.9:21534651 chr09:021534651 0 W/21534651-21534651 FN3798-S SNP G -> A AC=2;AN=190;BQB=0.957404;DP=2846;DP4=1413,1325,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.82065e-11;MQSB=0.983667;RPB=0.353345;SGB=64.5316;VDB=0.0563176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.9:21535805 chr09:021535805 0 W/21535805-21535805 FN2618-S SNP G -> C AC=1;AN=198;BQB=0.263484;DP=4095;DP4=1932,1949,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.03712e-13;MQSB=0.948275;RPB=0.329965;SGB=90.9049;VDB=0.212781;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.9:21538632 chr09:021538632 0 W/21538632-21538632 FN467-S Single Base Substitution C-T INTRON HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2795-S.SNP.9:21539246 chr09:021539246 0 W/21539246-21539246 FN2795-S SNP C -> A AC=1;AN=198;BQB=0.188771;DP=4184;DP4=1798,2179,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.66973e-12;MQSB=0.970303;RPB=0.780002;SGB=58.1246;VDB=0.892357;EFF=INTRON(MODIFIER||||315|LOC_Os09g37280|protein_coding|CODING|LOC_Os09g37280.1|8|1),INTRON(MODIFIER||||313|LOC_Os09g37280|protein_coding|CODING|LOC_Os09g37280.2|8|1|WARNING_TRANSCRIPT_INCOMPLETE) FN3549-S.SNP.9:21550324 chr09:021550324 0 W/21550324-21550324 FN3549-S SNP C -> A AC=1;AN=188;BQB=0.962537;DP=2763;DP4=1299,1400,1,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.40816e-05;MQSB=0.999998;RPB=0.928794;SGB=26.2637;VDB=0.624012;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.9:21553825 chr09:021553825 0 W/21553825-21553825 FN764-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g37310 retrotransposon protein, putative, unclassified, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-12.SNP.9:21559748 chr09:021559748 0 W/21559748-21559748 FN-12 Single Base Substitution T-C INTRON Homo SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN1442-S.SNP.9:21567511 chr09:021567511 0 W/21567511-21567511 FN1442-S Single Base Substitution G-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1442-S.SNP.9:21567531 chr09:021567531 0 W/21567531-21567531 FN1442-S Single Base Substitution C-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN-174.SNP.9:21572154 chr09:021572154 0 W/21572154-21572154 FN-174 Single Base Substitution G-T INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3679-S.SNP.9:21577067 chr09:021577067 0 W/21577067-21577067 FN3679-S SNP A -> G AC=1;AN=190;BQB=0.963347;DP=2796;DP4=1228,1416,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.19002e-14;MQSB=0.989559;RPB=0.105424;SGB=51.7524;VDB=0.208172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.9:21585167 chr09:021585167 0 W/21585167-21585167 FN2441 SNP C -> A AC=2;AN=200;BQB=0.881931;DP=5016;DP4=2363,2187,42,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.77549e-37;MQSB=0.939331;RPB=0.996314;SGB=279.777;VDB=0.931299;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.9:21593839 chr09:021593839 0 W/21593839-21593839 FN671-S Single Base Substitution T-C INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-279.SNP.9:21596362 chr09:021596362 0 W/21596362-21596362 FN-279 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g37446 expressed protein SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN879-S.SNP.9:21596494 chr09:021596494 0 W/21596494-21596494 FN879-S Single Base Substitution G-A INTRON HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN498-S.SNP.9:21599084 chr09:021599084 0 W/21599084-21599084 FN498-S Single Base Substitution A-C INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2626-S.SNP.9:21604445 chr09:021604445 0 W/21604445-21604445 FN2626-S SNP C -> A AC=1;AN=200;BQB=0.852325;DP=5110;DP4=2543,2326,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57904e-08;MQSB=0.991933;RPB=0.953509;SGB=54.2646;VDB=0.91653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3752-S.SNP.9:21612461 chr09:021612461 0 W/21612461-21612461 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.685559;DP=2936;DP4=1657,1170,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.44148e-08;MQSB=0.560413;RPB=0.484874;SGB=67.3108;VDB=0.232213;EFF=INTRON(MODIFIER||||476|LOC_Os09g37510|protein_coding|CODING|LOC_Os09g37510.1|2|1) FN-315.SNP.9:21615299 chr09:021615299 0 W/21615299-21615299 FN-315 Single Base Substitution G-A INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-223.SNP.9:21617295 chr09:021617295 0 W/21617295-21617295 FN-223 Single Base Substitution G-C INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2438.SNP.9:21622794 chr09:021622794 0 W/21622794-21622794 FN2438 SNP C -> T AC=2;AN=200;BQB=0.803271;DP=4703;DP4=2273,2058,22,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04613e-31;MQSB=0.947988;RPB=0.741901;SGB=120.666;VDB=0.855933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.9:21622797 chr09:021622797 0 W/21622797-21622797 FN2438 SNP A -> T AC=2;AN=200;BQB=0.239711;DP=4716;DP4=2283,2079,22,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.06057e-30;MQSB=0.998339;RPB=0.452179;SGB=64.0657;VDB=0.652409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.9:21624198 chr09:021624198 0 W/21624198-21624198 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.58972;DP=4424;DP4=2187,1996,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.24109e-16;MQSB=0.999939;RPB=0.916412;SGB=-7.28946;VDB=0.544948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.9:21627895 chr09:021627895 0 W/21627895-21627895 FN2698-S SNP G -> T AC=1;AN=200;BQB=0.823052;DP=4867;DP4=2174,2401,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.87453e-09;MQSB=0.952499;RPB=0.990868;SGB=34.6953;VDB=0.543168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.9:21648670 chr09:021648670 0 W/21648670-21648670 FN2697-S SNP C -> A AC=1;AN=200;BQB=0.999544;DP=5199;DP4=2450,2419,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.29153e-13;MQSB=0.999875;RPB=0.783166;SGB=45.1159;VDB=0.265651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.9:21649091 chr09:021649091 0 W/21649091-21649091 FN2102-S SNP G -> A AC=1;AN=168;BQB=0.0359814;DP=3377;DP4=1278,2058,3,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00124418;MQSB=0.81875;RPB=0.862321;SGB=-97.9335;VDB=0.459409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.9:21661930 chr09:021661930 0 W/21661930-21661930 FN2241-S SNP A -> G AC=2;AN=190;BQB=0.693191;DP=4846;DP4=2290,2191,20,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.71318e-23;MQSB=0.998984;RPB=0.0626976;SGB=135.609;VDB=0.0134363;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V1038|1243|LOC_Os09g37580|protein_coding|CODING|LOC_Os09g37580.1|8|1) FN4325-S.SNP.9:21666633 chr09:021666633 0 W/21666633-21666633 FN4325-S SNP T -> A AC=1;AN=170;BQB=0.968227;DP=2480;DP4=1367,1019,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.58751e-05;MQSB=0.856843;RPB=0.999901;SGB=30.1021;VDB=0.020653;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.9:21670529 chr09:021670529 0 W/21670529-21670529 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.999999;DP=2169;DP4=1134,888,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.64329e-05;MQSB=0.0130533;RPB=0.688709;SGB=30.8803;VDB=0.396463;EFF=INTRON(MODIFIER||||959|LOC_Os09g37590|protein_coding|CODING|LOC_Os09g37590.1|4|1) FN902-S.SNP.9:21673464 chr09:021673464 0 W/21673464-21673464 FN902-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g37590 OsFBDUF47 - F-box and DUF domain containing protein, expressed SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2478.SNP.9:21674082 chr09:021674082 0 W/21674082-21674082 FN2478 SNP G -> C AC=1;AN=200;BQB=0.563091;DP=4941;DP4=2295,2347,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.07465e-18;MQSB=0.998606;RPB=0.40644;SGB=31.9623;VDB=0.49806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.9:21674326 chr09:021674326 0 W/21674326-21674326 FN3700-S SNP C -> T AC=2;AN=190;BQB=0.983492;DP=3066;DP4=1541,1400,17,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.43299e-19;MQSB=0.879926;RPB=0.181947;SGB=144.727;VDB=0.197968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.9:21685543 chr09:021685543 0 W/21685543-21685543 FN2449 SNP T -> C AC=2;AN=200;BQB=0.575119;DP=5083;DP4=2527,2297,14,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.91346e-15;MQSB=0.998093;RPB=0.552826;SGB=123.342;VDB=0.0119259;EFF=INTRON(MODIFIER||||577|LOC_Os09g37610|protein_coding|CODING|LOC_Os09g37610.1|13|1) FN2646-S.SNP.9:21703402 chr09:021703402 0 W/21703402-21703402 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.878889;DP=4817;DP4=2347,2177,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24797e-13;MQSB=0.991512;RPB=0.90214;SGB=20.7261;VDB=0.930722;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R57|408|LOC_Os09g37660|protein_coding|CODING|LOC_Os09g37660.1|1|1) FN1410-S.SNP.9:21714252 chr09:021714252 0 W/21714252-21714252 FN1410-S Single Base Substitution T-A INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4129-S.SNP.9:21714456 chr09:021714456 0 W/21714456-21714456 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.999634;DP=3220;DP4=1547,1585,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=1.07221e-06;MQSB=0.710636;RPB=0.389106;SGB=42.6494;VDB=0.662019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.9:21714564 chr09:021714564 0 W/21714564-21714564 FN3464-S SNP T -> C AC=1;AN=184;BQB=0.232567;DP=3081;DP4=1469,1511,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.60184e-07;MQSB=0.979817;RPB=0.433633;SGB=0.715177;VDB=0.0475598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.9:21717002 chr09:021717002 0 W/21717002-21717002 FN2455 SNP G -> T AC=1;AN=200;BQB=0.26897;DP=4634;DP4=2043,2233,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51926e-05;MQSB=0.375288;RPB=0.856615;SGB=11.2488;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.9:21717319 chr09:021717319 0 W/21717319-21717319 FN319-S Single Base Substitution C-T INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3446-S.SNP.9:21718130 chr09:021718130 0 W/21718130-21718130 FN3446-S SNP A -> G AC=1;AN=184;BQB=0.77942;DP=2567;DP4=1009,1477,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11803e-08;MQSB=0.999626;RPB=0.107135;SGB=25.7969;VDB=0.0409749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.9:21721507 chr09:021721507 0 W/21721507-21721507 FN2194-S SNP C -> T AC=1;AN=190;BQB=0.962278;DP=5127;DP4=2269,2538,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.91948e-09;MQSB=0.989386;RPB=0.963066;SGB=5.66499;VDB=0.471111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.9:21727308 chr09:021727308 0 W/21727308-21727308 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.908039;DP=4699;DP4=2191,2276,12,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=4.19781e-07;MQSB=0.534476;RPB=0.774632;SGB=39.9056;VDB=0.409507;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.9:21730746 chr09:021730746 0 W/21730746-21730746 FN679-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN584-S.SNP.9:21734944 chr09:021734944 0 W/21734944-21734944 FN584-S Single Base Substitution T-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2442.SNP.9:21736564 chr09:021736564 0 W/21736564-21736564 FN2442 SNP T -> C AC=1;AN=200;BQB=0.958886;DP=4021;DP4=1910,1862,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000197587;MQSB=0.97046;RPB=0.977149;SGB=18.639;VDB=0.947685;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G215|842|LOC_Os09g37710|protein_coding|CODING|LOC_Os09g37710.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G215|842|LOC_Os09g37710|protein_coding|CODING|LOC_Os09g37710.2|3|1) FN1152-S.SNP.9:21740290 chr09:021740290 0 W/21740290-21740290 FN1152-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN862-S.SNP.9:21743166 chr09:021743166 0 W/21743166-21743166 FN862-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2704-S.SNP.9:21749431 chr09:021749431 0 W/21749431-21749431 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.549305;DP=4814;DP4=2419,2150,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.76579e-09;MQSB=0.998509;RPB=0.411988;SGB=-13.7154;VDB=0.604818;EFF=INTERGENIC(MODIFIER||||||||||1) FN-252.SNP.9:21751422 chr09:021751422 0 W/21751422-21751422 FN-252 Single Base Substitution A-G INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2373.SNP.9:21761719 chr09:021761719 0 W/21761719-21761719 FN2373 SNP T -> C AC=1;AN=192;BQB=0.823514;DP=5208;DP4=2493,2413,19,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18703e-17;MQSB=0.368454;RPB=0.974664;SGB=107.503;VDB=0.845695;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.9:21767780 chr09:021767780 0 W/21767780-21767780 FN1761-S SNP C -> T AC=1;AN=188;BQB=0.982772;DP=2650;DP4=1071,1501,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.124906;MQB=0.779163;MQSB=0;RPB=0.956373;SGB=-14.9998;VDB=0.493675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2683-S.SNP.9:21767828 chr09:021767828 0 W/21767828-21767828 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.377409;DP=5020;DP4=2127,2599,13,11;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.186255;MQB=0.984291;MQSB=1.35764e-08;RPB=0.920367;SGB=47.7211;VDB=0.470219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3090-S.SNP.9:21768244 chr09:021768244 0 W/21768244-21768244 FN3090-S SNP C -> A AC=2;AN=184;BQB=0.923439;DP=3490;DP4=1876,1456,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.42973e-12;MQSB=0.00962341;RPB=0.91556;SGB=78.0093;VDB=0.0586216;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.9:21768641 chr09:021768641 0 W/21768641-21768641 FN1636-S Single Base Substitution G-A INTERGENIC Homo SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1715-S.SNP.9:21768669 chr09:021768669 0 W/21768669-21768669 FN1715-S SNP G -> T AC=2;AN=188;BQB=0.0494177;DP=2152;DP4=977,1103,13,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.36257e-09;MQSB=0.985556;RPB=0.708984;SGB=-38.7347;VDB=0.913554;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.9:21775034 chr09:021775034 0 W/21775034-21775034 FN1254-S Single Base Substitution T-A INTRON HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN883-S.SNP.9:21775163 chr09:021775163 0 W/21775163-21775163 FN883-S Single Base Substitution A-T INTRON HOMO SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN-307.SNP.9:21779364 chr09:021779364 0 W/21779364-21779364 FN-307 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g37800 serine/threonine kinase, putative, expressed SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3676-S.SNP.9:21782639 chr09:021782639 0 W/21782639-21782639 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.736387;DP=3082;DP4=1584,1402,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79278e-06;MQSB=0.652624;RPB=0.172835;SGB=-2.10437;VDB=0.117469;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.9:21792627 chr09:021792627 0 W/21792627-21792627 FN4065-S SNP G -> T AC=1;AN=168;BQB=0.994277;DP=3090;DP4=1661,1341,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000323625;MQB=2.9691e-06;MQSB=0.976105;RPB=0.980298;SGB=34.4498;VDB=0.666297;EFF=INTERGENIC(MODIFIER||||||||||1) FN4065-S.SNP.9:21792628 chr09:021792628 0 W/21792628-21792628 FN4065-S SNP T -> A AC=1;AN=168;BQB=0.00469216;DP=3091;DP4=1625,1071,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00032352;MQB=0.000212219;MQSB=0.984139;RPB=0.878791;SGB=-97.9335;VDB=0.897668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2390.SNP.9:21796555 chr09:021796555 0 W/21796555-21796555 FN2390 SNP C -> T AC=2;AN=200;BQB=0.93217;DP=3960;DP4=2161,1548,25,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000252525;MQB=5.682e-16;MQSB=0.00430307;RPB=0.733679;SGB=150.973;VDB=0.254368;EFF=INTRON(MODIFIER||||162|LOC_Os09g37830|protein_coding|CODING|LOC_Os09g37830.1|1|1) FN2442.SNP.9:21820762 chr09:021820762 0 W/21820762-21820762 FN2442 SNP G -> A AC=1;AN=200;BQB=0.981953;DP=4857;DP4=2464,2160,14,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09992e-20;MQSB=0.913969;RPB=0.802426;SGB=115.978;VDB=0.533114;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.9:21823852 chr09:021823852 0 W/21823852-21823852 FN503-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN870-S.SNP.9:21835922 chr09:021835922 0 W/21835922-21835922 FN870-S Single Base Substitution T-C INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3834-S.SNP.9:21840041 chr09:021840041 0 W/21840041-21840041 FN3834-S SNP T -> C AC=1;AN=190;BQB=0.954888;DP=2755;DP4=1478,1219,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35175e-06;MQSB=0.973143;RPB=0.730609;SGB=35.4339;VDB=0.552312;EFF=INTERGENIC(MODIFIER||||||||||1) FN574-S.SNP.9:21840543 chr09:021840543 0 W/21840543-21840543 FN574-S Single Base Substitution T-A INTERGENIC HOMO SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN1410-S.SNP.9:21840742 chr09:021840742 0 W/21840742-21840742 FN1410-S Single Base Substitution G-A INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4177-S.SNP.9:21841647 chr09:021841647 0 W/21841647-21841647 FN4177-S SNP G -> A AC=1;AN=170;BQB=0.999915;DP=2980;DP4=1570,1315,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.63816e-10;MQSB=0.918561;RPB=0.461674;SGB=45.206;VDB=0.824046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E98K|838|LOC_Os09g37880|protein_coding|CODING|LOC_Os09g37880.1|1|1) FN3729-S.SNP.9:21855385 chr09:021855385 0 W/21855385-21855385 FN3729-S SNP A -> G AC=2;AN=190;BQB=0.951786;DP=2769;DP4=1316,1333,17,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.67717e-19;MQSB=0.9498;RPB=0.982351;SGB=149.281;VDB=0.838015;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.9:21858636 chr09:021858636 0 W/21858636-21858636 FN-199 Single Base Substitution C-T UTR_3_PRIME HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN547-S.SNP.9:21859643 chr09:021859643 0 W/21859643-21859643 FN547-S Single Base Substitution T-C INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2458.SNP.9:21870021 chr09:021870021 0 W/21870021-21870021 FN2458 SNP T -> G AC=1;AN=200;BQB=0.469073;DP=5060;DP4=2256,2408,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.44889e-14;MQSB=0.850598;RPB=0.822021;SGB=69.1109;VDB=0.303567;EFF=INTRON(MODIFIER||||1229|LOC_Os09g37930|protein_coding|CODING|LOC_Os09g37930.1|21|1) FN3566-S.SNP.9:21871862 chr09:021871862 0 W/21871862-21871862 FN3566-S SNP C -> G AC=1;AN=188;BQB=0.976914;DP=2512;DP4=1272,1177,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.72298e-08;MQSB=0.974495;RPB=0.944169;SGB=53.5223;VDB=0.842816;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L971|1229|LOC_Os09g37930|protein_coding|CODING|LOC_Os09g37930.1|16|1) FN1162-S.SNP.9:21872978 chr09:021872978 0 W/21872978-21872978 FN1162-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os09g37930 expressed protein SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN4070-S.SNP.9:21874828 chr09:021874828 0 W/21874828-21874828 FN4070-S SNP A -> G AC=1;AN=182;BQB=0.945433;DP=2688;DP4=1496,1089,18,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.84865e-18;MQSB=0.940305;RPB=0.987849;SGB=91.8015;VDB=0.114295;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F360L|1229|LOC_Os09g37930|protein_coding|CODING|LOC_Os09g37930.1|10|1) FN2665-S.SNP.9:21876495 chr09:021876495 0 W/21876495-21876495 FN2665-S SNP A -> T AC=1;AN=200;BQB=0.923754;DP=4687;DP4=2197,2334,16,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.47827e-14;MQSB=0.916174;RPB=0.80531;SGB=14.3054;VDB=0.834814;EFF=INTRON(MODIFIER||||1229|LOC_Os09g37930|protein_coding|CODING|LOC_Os09g37930.1|5|1) FN2665-S.SNP.9:21876498 chr09:021876498 0 W/21876498-21876498 FN2665-S SNP A -> G AC=1;AN=200;BQB=0.923919;DP=4700;DP4=2208,2304,16,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27687e-15;MQSB=0.82923;RPB=0.994236;SGB=-9.47921;VDB=0.603469;EFF=INTRON(MODIFIER||||1229|LOC_Os09g37930|protein_coding|CODING|LOC_Os09g37930.1|5|1) FN2482.SNP.9:21882726 chr09:021882726 0 W/21882726-21882726 FN2482 SNP C -> T AC=1;AN=200;BQB=0.45317;DP=5027;DP4=2101,2578,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.44659e-08;MQSB=0.942816;RPB=0.871907;SGB=26.8797;VDB=0.197212;EFF=INTRON(MODIFIER||||421|LOC_Os09g37949|protein_coding|CODING|LOC_Os09g37949.1|2|1) FN2255-S.SNP.9:21883045 chr09:021883045 0 W/21883045-21883045 FN2255-S SNP T -> A AC=1;AN=190;BQB=0.223557;DP=4729;DP4=2244,2034,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.08854e-07;MQSB=0.6973;RPB=0.733982;SGB=10.3266;VDB=0.270551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I291F|421|LOC_Os09g37949|protein_coding|CODING|LOC_Os09g37949.1|2|1) FN999-S.SNP.9:21887733 chr09:021887733 0 W/21887733-21887733 FN999-S Single Base Substitution C-T INTRON HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN1129-S.SNP.9:21890963 chr09:021890963 0 W/21890963-21890963 FN1129-S Single Base Substitution A-G INTERGENIC HET SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. W475-4-2.SNP.9:21892690 chr09:021892690 0 W/21892690-21892690 W475-4-2 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN1613-S.SNP.9:21892711 chr09:021892711 0 W/21892711-21892711 FN1613-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN3770-S.SNP.9:21892746 chr09:021892746 0 W/21892746-21892746 FN3770-S SNP T -> C AC=1;AN=190;BQB=0.493748;DP=2850;DP4=1489,1155,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0799284;MQSB=0.000898528;RPB=0.757937;SGB=8.33661;VDB=0.509555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T148A|350|LOC_Os09g37967|protein_coding|CODING|LOC_Os09g37967.1|1|1) FN1429-S.SNP.9:21893883 chr09:021893883 0 W/21893883-21893883 FN1429-S Single Base Substitution T-G INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN2497.SNP.9:21902296 chr09:021902296 0 W/21902296-21902296 FN2497 SNP G -> C AC=2;AN=200;BQB=0.258948;DP=5124;DP4=2276,2484,17,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.49693e-23;MQSB=0.844601;RPB=0.983934;SGB=4.4397;VDB=0.66266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.9:21904232 chr09:021904232 0 W/21904232-21904232 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.405485;DP=4219;DP4=2175,1870,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17737e-08;MQSB=0.990373;RPB=0.989718;SGB=43.7442;VDB=0.713512;EFF=INTRON(MODIFIER||||366|LOC_Os09g38000|protein_coding|CODING|LOC_Os09g38000.1|2|1) W472-5-1.SNP.9:21909834 chr09:021909834 0 W/21909834-21909834 W472-5-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os09g38010 no apical meristem protein, putative, expressed SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2715-S.SNP.9:21922234 chr09:021922234 0 W/21922234-21922234 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.239605;DP=5322;DP4=2444,2609,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33898e-12;MQSB=0.99837;RPB=0.782705;SGB=45.1159;VDB=0.663623;EFF=UTR_3_PRIME(MODIFIER||462||442|LOC_Os09g38030|protein_coding|CODING|LOC_Os09g38030.2|20|1),UTR_3_PRIME(MODIFIER||64||469|LOC_Os09g38030|protein_coding|CODING|LOC_Os09g38030.1|21|1) FN2698-S.SNP.9:21923468 chr09:021923468 0 W/21923468-21923468 FN2698-S SNP C -> A AC=1;AN=200;BQB=0.982818;DP=4996;DP4=2438,2188,14,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.04072e-19;MQSB=0.500242;RPB=0.35434;SGB=-4.03268;VDB=0.319307;EFF=INTRON(MODIFIER||||270|LOC_Os09g38040|protein_coding|CODING|LOC_Os09g38040.1|6|1),INTRON(MODIFIER||||184|LOC_Os09g38040|protein_coding|CODING|LOC_Os09g38040.2|6|1) FN1754-S.SNP.9:21923752 chr09:021923752 0 W/21923752-21923752 FN1754-S SNP G -> C AC=1;AN=188;BQB=0.496593;DP=3938;DP4=1929,1964,10,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.53901e-11;MQSB=0.810225;RPB=0.821236;SGB=-145.545;VDB=0.0385132;EFF=INTRON(MODIFIER||||270|LOC_Os09g38040|protein_coding|CODING|LOC_Os09g38040.1|5|1),INTRON(MODIFIER||||184|LOC_Os09g38040|protein_coding|CODING|LOC_Os09g38040.2|5|1) FN-403.SNP.9:21925554 chr09:021925554 0 W/21925554-21925554 FN-403 Single Base Substitution C-T INTRON HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.9:21925554 chr09:021925554 0 W/21925554-21925554 FN403-S Single Base Substitution C-T INTRON HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN1348-S.SNP.9:21926389 chr09:021926389 0 W/21926389-21926389 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN4163-S.SNP.9:21937466 chr09:021937466 0 W/21937466-21937466 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.885335;DP=2432;DP4=1206,1146,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.96442e-08;MQSB=0.979617;RPB=0.776862;SGB=47.8722;VDB=0.290783;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D276|287|LOC_Os09g38070|protein_coding|CODING|LOC_Os09g38070.1|1|1) FN799-S.SNP.9:21940900 chr09:021940900 0 W/21940900-21940900 FN799-S Single Base Substitution T-A INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN416-S.SNP.9:21942907 chr09:021942907 0 W/21942907-21942907 FN416-S Single Base Substitution C-T INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2780-S.SNP.9:21950254 chr09:021950254 0 W/21950254-21950254 FN2780-S SNP A -> T AC=2;AN=198;BQB=0.307177;DP=4231;DP4=2268,1711,26,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.57987e-27;MQSB=0.944271;RPB=0.175695;SGB=148.003;VDB=0.311325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Atc|F299I|323|LOC_Os09g38100|protein_coding|CODING|LOC_Os09g38100.1|5|1) FN2780-S.SNP.9:21950255 chr09:021950255 0 W/21950255-21950255 FN2780-S SNP C -> T AC=2;AN=198;BQB=0.583773;DP=4241;DP4=2250,1770,28,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.25284e-28;MQSB=0.964357;RPB=0.0331164;SGB=52.4176;VDB=0.332358;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W298*|323|LOC_Os09g38100|protein_coding|CODING|LOC_Os09g38100.1|5|1) FN1375-S.SNP.9:21950799 chr09:021950799 0 W/21950799-21950799 FN1375-S Single Base Substitution T-A INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3713-S.SNP.9:21953309 chr09:021953309 0 W/21953309-21953309 FN3713-S SNP T -> G AC=1;AN=190;BQB=0.696381;DP=3155;DP4=1496,1523,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32941e-07;MQSB=0.992561;RPB=0.304745;SGB=7.21887;VDB=0.0205044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3836-S.SNP.9:21957692 chr09:021957692 0 W/21957692-21957692 FN3836-S SNP T -> A AC=2;AN=190;BQB=0.158972;DP=2687;DP4=1342,1177,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.54509e-07;MQSB=0.815024;RPB=0.854486;SGB=-11.5603;VDB=0.973483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.9:21959251 chr09:021959251 0 W/21959251-21959251 FN1708-S SNP C -> G AC=1;AN=188;BQB=0.0547185;DP=2459;DP4=1294,1131,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000225496;MQSB=0.984198;RPB=0.173276;SGB=0.908323;VDB=0.382138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.9:21961313 chr09:021961313 0 W/21961313-21961313 FN2255-S SNP G -> A AC=1;AN=190;BQB=0.272921;DP=4489;DP4=2612,1512,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37967e-07;MQSB=0.594846;RPB=0.718666;SGB=8.77275;VDB=0.361542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A72T|90|LOC_Os09g38120|protein_coding|CODING|LOC_Os09g38120.1|2|1) FN1329-S.SNP.9:21964588 chr09:021964588 0 W/21964588-21964588 FN1329-S Single Base Substitution T-A INTRON HET SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-128.SNP.9:21968801 chr09:021968801 0 W/21968801-21968801 FN-128 Single Base Substitution C-T INTERGENIC HOMO SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN4156-S.SNP.9:21972228 chr09:021972228 0 W/21972228-21972228 FN4156-S SNP T -> C AC=2;AN=170;BQB=0.388894;DP=2460;DP4=1018,1375,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.80279e-09;MQSB=0.931875;RPB=0.933266;SGB=39.4251;VDB=0.985987;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.9:21972476 chr09:021972476 0 W/21972476-21972476 FN3887-S SNP G -> A AC=2;AN=158;BQB=0.807436;DP=2243;DP4=1071,1044,24,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.16747e-20;MQSB=0.997362;RPB=0.615988;SGB=170.68;VDB=0.897165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3974-S.SNP.9:21975764 chr09:021975764 0 W/21975764-21975764 FN3974-S SNP G -> T AC=1;AN=168;BQB=0.976961;DP=2753;DP4=1453,1206,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.59481e-06;MQSB=0.956499;RPB=0.635178;SGB=47.7421;VDB=0.801464;EFF=INTERGENIC(MODIFIER||||||||||1) FN951-S.SNP.9:21977445 chr09:021977445 0 W/21977445-21977445 FN951-S Single Base Substitution C-A INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN951-S.SNP.9:21977446 chr09:021977446 0 W/21977446-21977446 FN951-S Single Base Substitution C-T INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2794-S.SNP.9:21990715 chr09:021990715 0 W/21990715-21990715 FN2794-S SNP C -> T AC=2;AN=198;BQB=0.946237;DP=4034;DP4=1982,1864,21,18;HOB=0.019998;ICB=0.495001;MQ=38;MQ0F=0.0530491;MQB=0.00952371;MQSB=6.56874e-12;RPB=0.69859;SGB=130.027;VDB=0.713691;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.9:21991105 chr09:021991105 0 W/21991105-21991105 FN-150 Single Base Substitution G-A INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2147-S.SNP.9:21992578 chr09:021992578 0 W/21992578-21992578 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.335286;DP=2186;DP4=1093,1050,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0379689;MQB=0.856781;MQSB=0.0235246;RPB=0.0629516;SGB=10.0307;VDB=0.334172;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R283|1571|LOC_Os09g38180|protein_coding|CODING|LOC_Os09g38180.1|2|1) FN883-S.SNP.9:21997963 chr09:021997963 0 W/21997963-21997963 FN883-S Single Base Substitution C-T INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN3373-S.SNP.9:22007946 chr09:022007946 0 W/22007946-22007946 FN3373-S SNP T -> C AC=2;AN=184;BQB=0.972948;DP=3344;DP4=1498,1673,25,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.64185e-26;MQSB=0.969993;RPB=0.897375;SGB=169.576;VDB=0.0908822;EFF=INTRON(MODIFIER||||423|LOC_Os09g38210|protein_coding|CODING|LOC_Os09g38210.1|2|1) FN-338.SNP.9:22013735 chr09:022013735 0 W/22013735-22013735 FN-338 Single Base Substitution C-T INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN3967-S.SNP.9:22015889 chr09:022015889 0 W/22015889-22015889 FN3967-S SNP G -> T AC=1;AN=182;BQB=0.997827;DP=3325;DP4=1593,1590,23,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.80854e-18;MQSB=0.967871;RPB=0.846318;SGB=105.845;VDB=0.623742;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.9:22017924 chr09:022017924 0 W/22017924-22017924 FN2353 SNP G -> A AC=1;AN=192;BQB=0.585252;DP=4633;DP4=2168,2124,16,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.50184e-15;MQSB=0.974926;RPB=0.14293;SGB=-83.1643;VDB=0.0722547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.9:22024980 chr09:022024980 0 W/22024980-22024980 FN2239-S SNP T -> A AC=1;AN=190;BQB=0.97453;DP=4938;DP4=2554,2131,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.30844e-10;MQSB=0.954881;RPB=0.780378;SGB=85.5263;VDB=0.280872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.9:22026442 chr09:022026442 0 W/22026442-22026442 FN2377 SNP A -> T AC=2;AN=192;BQB=0.993495;DP=4924;DP4=2220,2316,37,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.97931e-40;MQSB=0.983608;RPB=0.477663;SGB=159.739;VDB=0.432012;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.9:22036312 chr09:022036312 0 W/22036312-22036312 FN466-S Single Base Substitution T-G INTRON HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN771-S.SNP.9:22049502 chr09:022049502 0 W/22049502-22049502 FN771-S Single Base Substitution G-A INTRON HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2649-S.SNP.9:22050975 chr09:022050975 0 W/22050975-22050975 FN2649-S SNP G -> C AC=1;AN=200;BQB=0.180977;DP=5021;DP4=2298,2476,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.23517e-10;MQSB=0.995379;RPB=0.956555;SGB=63.4749;VDB=0.822343;EFF=INTRON(MODIFIER||||740|LOC_Os09g38330|protein_coding|CODING|LOC_Os09g38330.1|12|1) FN1304-S.SNP.9:22053183 chr09:022053183 0 W/22053183-22053183 FN1304-S Single Base Substitution G-A INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN318-S.SNP.9:22056638 chr09:022056638 0 W/22056638-22056638 FN318-S Single Base Substitution T-C INTRON HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN-346.SNP.9:22057607 chr09:022057607 0 W/22057607-22057607 FN-346 Single Base Substitution C-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2730-S.SNP.9:22067261 chr09:022067261 0 W/22067261-22067261 FN2730-S SNP G -> A AC=2;AN=200;BQB=0.837964;DP=5194;DP4=2217,2767,16,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.83541e-20;MQSB=0.940708;RPB=0.753263;SGB=160.183;VDB=0.802693;EFF=INTRON(MODIFIER||||535|LOC_Os09g38340|protein_coding|CODING|LOC_Os09g38340.1|3|1),INTRON(MODIFIER||||535|LOC_Os09g38340|protein_coding|CODING|LOC_Os09g38340.2|3|1),INTRON(MODIFIER||||535|LOC_Os09g38340|protein_coding|CODING|LOC_Os09g38340.3|3|1) FN2652-S.SNP.9:22076790 chr09:022076790 0 W/22076790-22076790 FN2652-S SNP C -> G AC=1;AN=200;BQB=0.921337;DP=3448;DP4=1886,1332,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00806e-09;MQSB=0.986076;RPB=0.0728845;SGB=43.8747;VDB=0.00335515;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.9:22079922 chr09:022079922 0 W/22079922-22079922 FN4047-S SNP G -> C AC=1;AN=168;BQB=0.332921;DP=2863;DP4=1367,1339,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.89326e-06;MQSB=0.930755;RPB=0.80911;SGB=-1.53256;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.9:22080352 chr09:022080352 0 W/22080352-22080352 FN4240-S SNP T -> C AC=1;AN=170;BQB=0.960032;DP=2562;DP4=1297,1191,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.58086e-07;MQSB=0.993652;RPB=0.957646;SGB=27.9928;VDB=0.261569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.9:22082422 chr09:022082422 0 W/22082422-22082422 FN1724-S SNP A -> G AC=1;AN=188;BQB=0.000833113;DP=3433;DP4=1481,1912,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.63874e-05;MQSB=0.947042;RPB=0.919549;SGB=-124.805;VDB=0.611622;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.9:22097849 chr09:022097849 0 W/22097849-22097849 FN757-S Single Base Substitution C-A INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN1585-S.SNP.9:22099738 chr09:022099738 0 W/22099738-22099738 FN1585-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2276-S.SNP.9:22107932 chr09:022107932 0 W/22107932-22107932 FN2276-S SNP T -> C AC=1;AN=190;BQB=0.241883;DP=4854;DP4=2253,2088,19,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000206016;MQB=9.66188e-12;MQSB=0.287605;RPB=0.534485;SGB=-40.3396;VDB=0.383981;EFF=INTRON(MODIFIER||||219|LOC_Os09g38410|protein_coding|CODING|LOC_Os09g38410.1|11|1),INTRON(MODIFIER||||154|LOC_Os09g38410|protein_coding|CODING|LOC_Os09g38410.2|4|1) FN1032-S.SNP.9:22123114 chr09:022123114 0 W/22123114-22123114 FN1032-S Single Base Substitution T-C INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2388.SNP.9:22128673 chr09:022128673 0 W/22128673-22128673 FN2388 SNP G -> C AC=1;AN=200;BQB=0.489258;DP=4783;DP4=2249,2269,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.89829e-08;MQSB=0.730143;RPB=0.641613;SGB=49.6594;VDB=0.343517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.9:22138025 chr09:022138025 0 W/22138025-22138025 FN3552-S SNP G -> A AC=2;AN=188;BQB=0.996884;DP=2733;DP4=1215,1390,13,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.99196e-15;MQSB=0.939376;RPB=0.971552;SGB=112.585;VDB=0.59779;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.9:22138051 chr09:022138051 0 W/22138051-22138051 FN901-S Single Base Substitution T-A INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN-346.SNP.9:22142191 chr09:022142191 0 W/22142191-22142191 FN-346 Single Base Substitution A-G INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2661-S.SNP.9:22151099 chr09:022151099 0 W/22151099-22151099 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.98335;DP=5018;DP4=2428,2197,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.89533e-05;MQSB=0.996269;RPB=0.196329;SGB=-1.74624;VDB=0.539478;EFF=INTRON(MODIFIER||||481|LOC_Os09g38490|protein_coding|CODING|LOC_Os09g38490.1|2|1) FN_N1-151-1.SNP.9:22155342 chr09:022155342 0 W/22155342-22155342 FN_N1-151-1 Single Base Substitution C-G INTRON HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN1176-S.SNP.9:22155438 chr09:022155438 0 W/22155438-22155438 FN1176-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3455-S.SNP.9:22156475 chr09:022156475 0 W/22156475-22156475 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.902803;DP=3264;DP4=1481,1552,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.84797e-12;MQSB=0.989705;RPB=0.932281;SGB=12.8895;VDB=0.906276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.9:22158640 chr09:022158640 0 W/22158640-22158640 FN2080-S SNP C -> A AC=1;AN=168;BQB=0.000390545;DP=4006;DP4=1807,2156,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.83649e-05;MQSB=0.968867;RPB=0.969579;SGB=-183.337;VDB=0.584274;EFF=INTRON(MODIFIER||||388|LOC_Os09g38510|protein_coding|CODING|LOC_Os09g38510.1|1|1) FN1053-S.SNP.9:22159270 chr09:022159270 0 W/22159270-22159270 FN1053-S Single Base Substitution T-A INTRON HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1761-S.SNP.9:22161503 chr09:022161503 0 W/22161503-22161503 FN1761-S SNP T -> A AC=1;AN=188;BQB=0.0141769;DP=3030;DP4=1586,1399,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.91734e-05;MQSB=0.91805;RPB=0.999562;SGB=-74.1569;VDB=0.145554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I685F|892|LOC_Os09g38520|protein_coding|CODING|LOC_Os09g38520.1|1|1) FN1761-S.SNP.9:22161505 chr09:022161505 0 W/22161505-22161505 FN1761-S SNP C -> A AC=1;AN=188;BQB=0.0549585;DP=3033;DP4=1581,1415,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.91495e-05;MQSB=0.925994;RPB=0.999997;SGB=-51.7056;VDB=0.474283;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G684V|892|LOC_Os09g38520|protein_coding|CODING|LOC_Os09g38520.1|1|1) FN555-S.SNP.9:22163500 chr09:022163500 0 W/22163500-22163500 FN555-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g38520 DOMON domain containing protein, expressed SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1286-S.SNP.9:22168146 chr09:022168146 0 W/22168146-22168146 FN1286-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2098-S.SNP.9:22169466 chr09:022169466 0 W/22169466-22169466 FN2098-S SNP G -> A AC=1;AN=168;BQB=0.619586;DP=4076;DP4=1958,2061,16,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.33415e-16;MQSB=0.956612;RPB=0.516213;SGB=-165.748;VDB=0.417232;EFF=INTRON(MODIFIER||||646|LOC_Os09g38530|protein_coding|CODING|LOC_Os09g38530.1|1|1) FN4179-S.SNP.9:22174997 chr09:022174997 0 W/22174997-22174997 FN4179-S SNP A -> C AC=1;AN=170;BQB=0.991307;DP=2539;DP4=1175,1273,12,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.87227e-18;MQSB=0.994354;RPB=0.983845;SGB=83.0751;VDB=0.107972;EFF=SPLICE_SITE_REGION(LOW||||362|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.1|8|1),SPLICE_SITE_REGION(LOW||||352|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.2|8|1),SPLICE_SITE_REGION(LOW||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.4|8|1),SPLICE_SITE_REGION(LOW||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.5|8|1),INTRON(MODIFIER||||362|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.1|8|1),INTRON(MODIFIER||||352|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.2|8|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.4|8|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.5|8|1) FN4179-S.SNP.9:22175001 chr09:022175001 0 W/22175001-22175001 FN4179-S SNP A -> C AC=1;AN=170;BQB=0.999733;DP=2545;DP4=1167,1287,12,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.52923e-17;MQSB=0.976711;RPB=0.955927;SGB=110.069;VDB=0.140543;EFF=SPLICE_SITE_REGION(LOW||||362|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.1|8|1),SPLICE_SITE_REGION(LOW||||352|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.2|8|1),SPLICE_SITE_REGION(LOW||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.4|8|1),SPLICE_SITE_REGION(LOW||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.5|8|1),INTRON(MODIFIER||||362|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.1|8|1),INTRON(MODIFIER||||352|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.2|8|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.4|8|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.5|8|1) FN1738-S.SNP.9:22175779 chr09:022175779 0 W/22175779-22175779 FN1738-S SNP T -> C AC=1;AN=188;BQB=0.335349;DP=4205;DP4=2117,2046,14,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.30955e-16;MQSB=0.999666;RPB=0.826075;SGB=25.601;VDB=0.454166;EFF=INTRON(MODIFIER||||362|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.1|5|1),INTRON(MODIFIER||||352|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.2|5|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.4|5|1),INTRON(MODIFIER||||351|LOC_Os09g38550|protein_coding|CODING|LOC_Os09g38550.5|5|1) FN3503-S.SNP.9:22179165 chr09:022179165 0 W/22179165-22179165 FN3503-S SNP T -> C AC=1;AN=188;BQB=0.878424;DP=2692;DP4=1432,1195,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000205207;MQSB=0.984118;RPB=0.868165;SGB=18.2682;VDB=0.841906;EFF=INTERGENIC(MODIFIER||||||||||1) FN871-S.SNP.9:22181319 chr09:022181319 0 W/22181319-22181319 FN871-S Single Base Substitution A-T INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN871-S.SNP.9:22181345 chr09:022181345 0 W/22181345-22181345 FN871-S Single Base Substitution C-T INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN4304-S.SNP.9:22181826 chr09:022181826 0 W/22181826-22181826 FN4304-S SNP C -> A AC=1;AN=170;BQB=0.955786;DP=2743;DP4=1314,1376,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.59649e-07;MQSB=0.999863;RPB=0.147349;SGB=24.5502;VDB=0.532765;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L21|72|LOC_Os09g38560|protein_coding|CODING|LOC_Os09g38560.1|1|1) FN442-S.SNP.9:22183551 chr09:022183551 0 W/22183551-22183551 FN442-S Single Base Substitution T-A INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. W22-2-1.SNP.9:22187039 chr09:022187039 0 W/22187039-22187039 W22-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3362-S.SNP.9:22187790 chr09:022187790 0 W/22187790-22187790 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.668728;DP=3467;DP4=1418,1939,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62157e-07;MQSB=0.966955;RPB=0.316445;SGB=49.835;VDB=0.450105;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.9:22194973 chr09:022194973 0 W/22194973-22194973 FN1094-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g38580 cyclic nucleotide-gated ion channel, putative, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2377.SNP.9:22199763 chr09:022199763 0 W/22199763-22199763 FN2377 SNP G -> A AC=2;AN=192;BQB=0.621748;DP=4847;DP4=2375,2095,20,33;HOB=0.0206163;ICB=0.494846;MQ=37;MQ0F=0.131421;MQB=0.0306878;MQSB=4.3445e-11;RPB=0.0645454;SGB=121.23;VDB=0.067009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.9:22201270 chr09:022201270 0 W/22201270-22201270 FN3676-S SNP C -> T AC=1;AN=190;BQB=0.883782;DP=3384;DP4=1720,1442,11,1;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0419622;MQB=0.510362;MQSB=0;RPB=0.932728;SGB=15.9981;VDB=0.59634;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.9:22204214 chr09:022204214 0 W/22204214-22204214 FN3503-S SNP A -> G AC=1;AN=188;BQB=0.920217;DP=2496;DP4=1285,1164,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.3932e-07;MQSB=0.945781;RPB=0.236653;SGB=28.8977;VDB=0.608538;EFF=INTERGENIC(MODIFIER||||||||||1) FN997-S.SNP.9:22210113 chr09:022210113 0 W/22210113-22210113 FN997-S Single Base Substitution C-A INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN354-S.SNP.9:22214509 chr09:022214509 0 W/22214509-22214509 FN354-S Single Base Substitution A-T INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN2432.SNP.9:22214865 chr09:022214865 0 W/22214865-22214865 FN2432 SNP G -> A AC=1;AN=200;BQB=0.951162;DP=4706;DP4=2278,2164,15,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.49709e-13;MQSB=0.954638;RPB=0.877275;SGB=86.5007;VDB=0.348672;EFF=INTRON(MODIFIER||||714|LOC_Os09g38620|protein_coding|CODING|LOC_Os09g38620.1|13|1) FN1094-S.SNP.9:22220590 chr09:022220590 0 W/22220590-22220590 FN1094-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2085-S.SNP.9:22221759 chr09:022221759 0 W/22221759-22221759 FN2085-S SNP A -> C AC=1;AN=168;BQB=0.712733;DP=2118;DP4=971,1042,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.08803e-05;MQSB=0.9642;RPB=0.56365;SGB=31.3172;VDB=0.24747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Gcg|S77A|525|LOC_Os09g38630|protein_coding|CODING|LOC_Os09g38630.1|1|1) FN3628-S.SNP.9:22225618 chr09:022225618 0 W/22225618-22225618 FN3628-S SNP C -> A AC=2;AN=190;BQB=0.996276;DP=2355;DP4=1344,917,6,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.6307e-06;MQSB=0.604524;RPB=0.138221;SGB=44.5415;VDB=0.00878963;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L369|446|LOC_Os09g38650|protein_coding|CODING|LOC_Os09g38650.1|2|1) FN3950-S.SNP.9:22227209 chr09:022227209 0 W/22227209-22227209 FN3950-S SNP T -> C AC=2;AN=168;BQB=0.744004;DP=1151;DP4=66,907,0,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.94985e-10;MQSB=0.999609;RPB=0.955774;SGB=69.1881;VDB=0.530276;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.9:22230190 chr09:022230190 0 W/22230190-22230190 W426-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN-77.SNP.9:22230234 chr09:022230234 0 W/22230234-22230234 FN-77 Single Base Substitution C-A INTERGENIC HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN1401-S.SNP.9:22236491 chr09:022236491 0 W/22236491-22236491 FN1401-S Single Base Substitution C-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2784-S.SNP.9:22237780 chr09:022237780 0 W/22237780-22237780 FN2784-S SNP A -> G AC=1;AN=198;BQB=0.933333;DP=4217;DP4=2004,1996,13,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.87205e-15;MQSB=0.993086;RPB=0.92983;SGB=52.7004;VDB=0.696633;EFF=INTRON(MODIFIER||||103|LOC_Os09g38680|protein_coding|CODING|LOC_Os09g38680.1|1|1) FN3599-S.SNP.9:22239851 chr09:022239851 0 W/22239851-22239851 FN3599-S SNP C -> A AC=1;AN=188;BQB=0.914051;DP=2986;DP4=1145,1738,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.91057e-11;MQSB=0.999864;RPB=0.768908;SGB=26.0762;VDB=0.428107;EFF=INTRON(MODIFIER||||490|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.1|1|1),INTRON(MODIFIER||||418|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.2|1|1),INTRON(MODIFIER||||405|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.3|1|1),INTRON(MODIFIER||||319|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.4|1|1) FN3599-S.SNP.9:22239852 chr09:022239852 0 W/22239852-22239852 FN3599-S SNP C -> A AC=1;AN=188;BQB=0.877856;DP=2980;DP4=1150,1750,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.98011e-08;MQSB=0.999884;RPB=0.93078;SGB=39.5276;VDB=0.608326;EFF=INTRON(MODIFIER||||490|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.1|1|1),INTRON(MODIFIER||||418|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.2|1|1),INTRON(MODIFIER||||405|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.3|1|1),INTRON(MODIFIER||||319|LOC_Os09g38690|protein_coding|CODING|LOC_Os09g38690.4|1|1) FN1085-S.SNP.9:22241545 chr09:022241545 0 W/22241545-22241545 FN1085-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os09g38690 transporter family protein, putative, expressed SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3442-S.SNP.9:22255449 chr09:022255449 0 W/22255449-22255449 FN3442-S SNP C -> A AC=1;AN=184;BQB=0.99995;DP=2675;DP4=1243,1333,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.93707e-09;MQSB=0.301679;RPB=0.945686;SGB=42.7914;VDB=0.502858;EFF=INTERGENIC(MODIFIER||||||||||1) FN-61.SNP.9:22258392 chr09:022258392 0 W/22258392-22258392 FN-61 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN685-S.SNP.9:22264156 chr09:022264156 0 W/22264156-22264156 FN685-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os09g38740 expressed protein SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN685-S.SNP.9:22264161 chr09:022264161 0 W/22264161-22264161 FN685-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN1142-S.SNP.9:22269035 chr09:022269035 0 W/22269035-22269035 FN1142-S Single Base Substitution G-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN3779-S.SNP.9:22275511 chr09:022275511 0 W/22275511-22275511 FN3779-S SNP G -> T AC=2;AN=190;BQB=0.938657;DP=2535;DP4=1239,1179,16,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.1858e-14;MQSB=0.669882;RPB=0.825355;SGB=82.301;VDB=0.50625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G14C|351|LOC_Os09g38768|protein_coding|CODING|LOC_Os09g38768.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G14C|351|LOC_Os09g38768|protein_coding|CODING|LOC_Os09g38768.1|2|1) FN2309.SNP.9:22280260 chr09:022280260 0 W/22280260-22280260 FN2309 SNP G -> A AC=1;AN=192;BQB=0.995162;DP=5312;DP4=2387,2549,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.57213e-12;MQSB=0.944565;RPB=0.709933;SGB=64.7304;VDB=0.554088;EFF=INTRON(MODIFIER||||324|LOC_Os09g38772|protein_coding|CODING|LOC_Os09g38772.1|6|1) FN2309.SNP.9:22280261 chr09:022280261 0 W/22280261-22280261 FN2309 SNP G -> T AC=1;AN=192;BQB=0.934291;DP=5301;DP4=2350,2530,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26962e-12;MQSB=0.975002;RPB=0.982208;SGB=64.7304;VDB=0.4567;EFF=INTRON(MODIFIER||||324|LOC_Os09g38772|protein_coding|CODING|LOC_Os09g38772.1|6|1) FN2684-S.SNP.9:22285135 chr09:022285135 0 W/22285135-22285135 FN2684-S SNP C -> A AC=2;AN=200;BQB=0.456262;DP=3822;DP4=1601,1764,13,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.27298e-12;MQSB=0.0127025;RPB=0.989906;SGB=109.527;VDB=0.0432496;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E376D|549|LOC_Os09g38784|protein_coding|CODING|LOC_Os09g38784.1|2|1) FN2734-S.SNP.9:22288478 chr09:022288478 0 W/22288478-22288478 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.943256;DP=4959;DP4=2393,2269,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15049e-12;MQSB=0.926741;RPB=0.990503;SGB=91.1059;VDB=0.75057;EFF=UTR_3_PRIME(MODIFIER||427||355|LOC_Os09g38790|protein_coding|CODING|LOC_Os09g38790.1|6|1),UTR_3_PRIME(MODIFIER||427||355|LOC_Os09g38790|protein_coding|CODING|LOC_Os09g38790.2|6|1),INTRON(MODIFIER||||345|LOC_Os09g38790|protein_coding|CODING|LOC_Os09g38790.3|6|1) FN3821-S.SNP.9:22299748 chr09:022299748 0 W/22299748-22299748 FN3821-S SNP T -> A AC=1;AN=190;BQB=0.88612;DP=3053;DP4=1373,1515,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50657e-06;MQSB=0.771043;RPB=0.0696783;SGB=44.5415;VDB=0.0843877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.9:22299749 chr09:022299749 0 W/22299749-22299749 FN3821-S SNP C -> T AC=1;AN=190;BQB=0.905971;DP=3067;DP4=1449,1531,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.84826e-07;MQSB=0.670597;RPB=0.0728178;SGB=44.5415;VDB=0.0652094;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.9:22305872 chr09:022305872 0 W/22305872-22305872 FN3567-S SNP T -> C AC=1;AN=188;BQB=0.736322;DP=2631;DP4=1306,1199,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.70273e-07;MQSB=0.965325;RPB=0.358292;SGB=28.8977;VDB=0.143787;EFF=INTERGENIC(MODIFIER||||||||||1) FN1444-S.SNP.9:22307975 chr09:022307975 0 W/22307975-22307975 FN1444-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN3888-S.SNP.9:22308252 chr09:022308252 0 W/22308252-22308252 FN3888-S SNP G -> A AC=2;AN=158;BQB=0.913674;DP=2541;DP4=1366,1067,29,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.64857e-21;MQSB=0.520417;RPB=0.852762;SGB=156.303;VDB=0.231709;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D251N|770|LOC_Os09g38834|protein_coding|CODING|LOC_Os09g38834.1|1|1) FN2337.SNP.9:22309705 chr09:022309705 0 W/22309705-22309705 FN2337 SNP A -> G AC=1;AN=192;BQB=0.995456;DP=4860;DP4=2320,2121,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.72188e-06;MQSB=0.918476;RPB=0.893026;SGB=7.3548;VDB=0.715252;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D613G|770|LOC_Os09g38834|protein_coding|CODING|LOC_Os09g38834.1|3|1) FN3395-S.SNP.9:22310780 chr09:022310780 0 W/22310780-22310780 FN3395-S SNP T -> A AC=1;AN=184;BQB=0.994628;DP=2984;DP4=1483,1410,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23229e-09;MQSB=0.993729;RPB=0.73574;SGB=49.835;VDB=0.1321;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.9:22313733 chr09:022313733 0 W/22313733-22313733 FN552-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2399.SNP.9:22316513 chr09:022316513 0 W/22316513-22316513 FN2399 SNP A -> T AC=2;AN=200;BQB=0.00176089;DP=3843;DP4=1729,1202,14,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.87405e-13;MQSB=0.65924;RPB=0.00364885;SGB=-534.998;VDB=0.00400141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E253V|729|LOC_Os09g38850|protein_coding|CODING|LOC_Os09g38850.1|1|1) FN2399.SNP.9:22316522 chr09:022316522 0 W/22316522-22316522 FN2399 SNP A -> G AC=2;AN=200;BQB=0.419453;DP=3879;DP4=1932,1246,15,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.91146e-15;MQSB=0.978149;RPB=0.0548543;SGB=-124.018;VDB=0.206739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N256S|729|LOC_Os09g38850|protein_coding|CODING|LOC_Os09g38850.1|1|1) FN1215-S.SNP.9:22319645 chr09:022319645 0 W/22319645-22319645 FN1215-S Single Base Substitution G-C INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN2330.SNP.9:22321046 chr09:022321046 0 W/22321046-22321046 FN2330 SNP G -> A AC=1;AN=192;BQB=0.913829;DP=5273;DP4=2174,2658,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000189645;MQB=2.16878e-10;MQSB=0.0168915;RPB=0.921299;SGB=18.3052;VDB=0.594813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.9:22324772 chr09:022324772 0 W/22324772-22324772 FN1339-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2480.SNP.9:22325175 chr09:022325175 0 W/22325175-22325175 FN2480 SNP C -> A AC=1;AN=200;BQB=0.400868;DP=4031;DP4=1874,1970,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.24277e-05;MQSB=0.717375;RPB=0.670508;SGB=40.4492;VDB=0.399237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.9:22331835 chr09:022331835 0 W/22331835-22331835 FN1080-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os09g38890 expressed protein SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-112.SNP.9:22333252 chr09:022333252 0 W/22333252-22333252 FN-112 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN574-S.SNP.9:22341722 chr09:022341722 0 W/22341722-22341722 FN574-S Single Base Substitution C-A INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN499-S.SNP.9:22352886 chr09:022352886 0 W/22352886-22352886 FN499-S Single Base Substitution C-T INTRON HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2725-S.SNP.9:22374907 chr09:022374907 0 W/22374907-22374907 FN2725-S SNP T -> C AC=1;AN=200;BQB=0.90304;DP=4981;DP4=2550,2282,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85326e-07;MQSB=0.813094;RPB=0.997594;SGB=29.4541;VDB=0.926487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.9:22377116 chr09:022377116 0 W/22377116-22377116 FN2478 SNP C -> T AC=1;AN=200;BQB=0.39581;DP=4569;DP4=1972,2395,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.5684e-08;MQSB=0.774802;RPB=0.284966;SGB=34.6953;VDB=0.611599;EFF=INTRON(MODIFIER||||700|LOC_Os09g38970|protein_coding|CODING|LOC_Os09g38970.1|1|1) FN2276-S.SNP.9:22395028 chr09:022395028 0 W/22395028-22395028 FN2276-S SNP A -> G AC=1;AN=190;BQB=0.732188;DP=5281;DP4=2503,2412,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.93676e-08;MQSB=0.998559;RPB=0.989802;SGB=36.1006;VDB=0.240536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.9:22395327 chr09:022395327 0 W/22395327-22395327 FN2410 SNP T -> A AC=1;AN=200;BQB=0.716248;DP=4312;DP4=1803,1449,9,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=4.8968e-08;MQSB=0.354013;RPB=0.970822;SGB=86.5007;VDB=0.343508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.9:22395327 chr09:022395327 0 W/22395327-22395327 FN3429-S SNP T -> A AC=1;AN=184;BQB=0.980939;DP=2431;DP4=1012,837,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=2.94693e-05;MQSB=0.796009;RPB=0.80732;SGB=8.14452;VDB=0.0222304;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.9:22395327 chr09:022395327 0 W/22395327-22395327 W246-5-1 Single Base Substitution T-A INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN4184-S.SNP.9:22398199 chr09:022398199 0 W/22398199-22398199 FN4184-S SNP T -> C AC=1;AN=170;BQB=0.732063;DP=2667;DP4=1256,1310,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00112486;MQB=0.151943;MQSB=0.99977;RPB=0.94589;SGB=38.987;VDB=0.759714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.9:22401126 chr09:022401126 0 W/22401126-22401126 FN1585-S Single Base Substitution A-T INTRON HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2123-S.SNP.9:22406188 chr09:022406188 0 W/22406188-22406188 FN2123-S SNP C -> A AC=1;AN=168;BQB=0.101197;DP=3684;DP4=1980,1648,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4439e-10;MQSB=0.999684;RPB=0.996784;SGB=-42.92;VDB=0.399721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C408F|432|LOC_Os09g39034|protein_coding|CODING|LOC_Os09g39034.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C403F|427|LOC_Os09g39034|protein_coding|CODING|LOC_Os09g39034.2|10|1) FN1561-S.SNP.9:22410881 chr09:022410881 0 W/22410881-22410881 FN1561-S Single Base Substitution G-A INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3570-S.SNP.9:22414570 chr09:022414570 0 W/22414570-22414570 FN3570-S SNP G -> T AC=1;AN=190;BQB=0.829628;DP=2622;DP4=1397,1070,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64634e-05;MQSB=0.997122;RPB=0.982387;SGB=25.439;VDB=0.960168;EFF=INTERGENIC(MODIFIER||||||||||1) FN1641-S.SNP.9:22415865 chr09:022415865 0 W/22415865-22415865 FN1641-S Single Base Substitution G-A INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2315.SNP.9:22416680 chr09:022416680 0 W/22416680-22416680 FN2315 SNP A -> T AC=2;AN=192;BQB=0.693299;DP=4876;DP4=2504,2130,31,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.30575e-24;MQSB=0.171727;RPB=0.990182;SGB=116.102;VDB=0.934148;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.9:22421758 chr09:022421758 0 W/22421758-22421758 FN3639-S SNP A -> T AC=1;AN=190;BQB=0.97222;DP=3113;DP4=1513,1483,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83288e-09;MQSB=0.687957;RPB=0.435608;SGB=71.8647;VDB=0.173104;EFF=INTRON(MODIFIER||||283|LOC_Os09g39060|protein_coding|CODING|LOC_Os09g39060.1|1|1) FN3516-S.SNP.9:22440984 chr09:022440984 0 W/22440984-22440984 FN3516-S SNP G -> C AC=2;AN=188;BQB=0.83182;DP=1889;DP4=296,1372,5,15;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.88055e-07;MQSB=1.35978e-09;RPB=0.995621;SGB=11.7114;VDB=0.936116;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.9:22441522 chr09:022441522 0 W/22441522-22441522 FN933-S Single Base Substitution T-A INTERGENIC HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-147.SNP.9:22443542 chr09:022443542 0 W/22443542-22443542 FN-147 Single Base Substitution T-C INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN3322-S.SNP.9:22454081 chr09:022454081 0 W/22454081-22454081 FN3322-S SNP T -> C AC=1;AN=184;BQB=0.995171;DP=2532;DP4=1101,1329,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.5483e-06;MQSB=0.974606;RPB=0.995842;SGB=8.14452;VDB=0.251355;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.9:22455912 chr09:022455912 0 W/22455912-22455912 FN4043-S SNP A -> G AC=1;AN=168;BQB=0.979566;DP=3548;DP4=1406,1879,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.63207e-13;MQSB=0.954696;RPB=0.85394;SGB=69.0561;VDB=0.337454;EFF=INTRON(MODIFIER||||359|LOC_Os09g39120|protein_coding|CODING|LOC_Os09g39120.1|2|1) FN891-S.SNP.9:22456023 chr09:022456023 0 W/22456023-22456023 FN891-S Single Base Substitution T-A INTRON HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3368-S.SNP.9:22457302 chr09:022457302 0 W/22457302-22457302 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.620183;DP=3061;DP4=1529,1454,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.06555e-09;MQSB=0.911942;RPB=0.452762;SGB=38.4058;VDB=0.994977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G93S|359|LOC_Os09g39120|protein_coding|CODING|LOC_Os09g39120.1|1|1) FN1184-S.SNP.9:22462682 chr09:022462682 0 W/22462682-22462682 FN1184-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2214-S.SNP.9:22483270 chr09:022483270 0 W/22483270-22483270 FN2214-S SNP T -> G AC=1;AN=190;BQB=0.777866;DP=2527;DP4=1201,1190,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0237436;MQB=0.655875;MQSB=1.41981e-07;RPB=0.95619;SGB=60.9777;VDB=0.0341363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.9:22497118 chr09:022497118 0 W/22497118-22497118 FN3750-S SNP C -> T AC=1;AN=188;BQB=0.985289;DP=1421;DP4=565,791,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00140746;MQB=0.0303243;MQSB=6.41031e-09;RPB=0.432647;SGB=44.5415;VDB=0.206417;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.9:22517727 chr09:022517727 0 W/22517727-22517727 FN4002-S SNP A -> G AC=1;AN=168;BQB=0.953201;DP=2379;DP4=1276,928,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.8507e-07;MQSB=0.832214;RPB=0.650931;SGB=-0.101747;VDB=0.588044;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.9:22517764 chr09:022517764 0 W/22517764-22517764 FN2492 SNP C -> A AC=1;AN=200;BQB=0.680146;DP=4583;DP4=2293,2028,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65565e-08;MQSB=0.87951;RPB=0.456407;SGB=29.4849;VDB=0.540352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.9:22520840 chr09:022520840 0 W/22520840-22520840 FN3511-S SNP T -> C AC=2;AN=188;BQB=0.998737;DP=2641;DP4=1267,1251,5,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.08057e-09;MQSB=0.837022;RPB=0.998485;SGB=43.0708;VDB=0.384463;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.9:22523080 chr09:022523080 0 W/22523080-22523080 FN2284 SNP G -> T AC=1;AN=192;BQB=0.569493;DP=4896;DP4=2358,2328,2,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.30707e-08;MQSB=0.995348;RPB=0.64483;SGB=2.66176;VDB=0.439122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.9:22528144 chr09:022528144 0 W/22528144-22528144 FN2575-S SNP G -> C AC=1;AN=198;BQB=0.740318;DP=4025;DP4=1899,1831,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.89205e-17;MQSB=0.991096;RPB=0.0125707;SGB=123.071;VDB=0.208449;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.9:22536657 chr09:022536657 0 W/22536657-22536657 W502-3-4 Single Base Substitution T-G UTR_5_PRIME HOMO SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN4128-S.SNP.9:22541764 chr09:022541764 0 W/22541764-22541764 FN4128-S SNP C -> T AC=2;AN=182;BQB=0.997897;DP=2936;DP4=1250,1595,12,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.90801e-14;MQSB=0.804904;RPB=0.129271;SGB=111.774;VDB=0.77359;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.9:22541764 chr09:022541764 0 W/22541764-22541764 FN673-S Single Base Substitution C-T INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN4279-S.SNP.9:22544624 chr09:022544624 0 W/22544624-22544624 FN4279-S SNP C -> T AC=1;AN=170;BQB=0.987802;DP=2700;DP4=1201,1435,4,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000149868;MQSB=0.459848;RPB=0.434055;SGB=31.4354;VDB=0.204983;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y129|268|LOC_Os09g39240|protein_coding|CODING|LOC_Os09g39240.1|1|1) FN1540-S.SNP.9:22548434 chr09:022548434 0 W/22548434-22548434 FN1540-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os09g39250 expressed protein SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2122-S.SNP.9:22551727 chr09:022551727 0 W/22551727-22551727 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.387363;DP=3093;DP4=1462,1586,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97883e-07;MQSB=0.989356;RPB=0.876372;SGB=9.91396;VDB=0.006808;EFF=INTRON(MODIFIER||||405|LOC_Os09g39250|protein_coding|CODING|LOC_Os09g39250.1|1|1) FN2535-S.SNP.9:22552301 chr09:022552301 0 W/22552301-22552301 FN2535-S SNP G -> T AC=1;AN=198;BQB=0.695982;DP=4474;DP4=2243,1935,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.04831e-08;MQSB=0.810876;RPB=0.995856;SGB=40.149;VDB=0.79373;EFF=INTRON(MODIFIER||||405|LOC_Os09g39250|protein_coding|CODING|LOC_Os09g39250.1|1|1) FN3979-S.SNP.9:22558415 chr09:022558415 0 W/22558415-22558415 FN3979-S SNP A -> T AC=1;AN=168;BQB=0.939864;DP=2513;DP4=1228,1133,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.142459;MQB=0.980678;MQSB=8.65492e-10;RPB=0.961827;SGB=51.902;VDB=0.702467;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.9:22559153 chr09:022559153 0 W/22559153-22559153 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3395-S.SNP.9:22573467 chr09:022573467 0 W/22573467-22573467 FN3395-S SNP A -> G AC=1;AN=184;BQB=0.895228;DP=3034;DP4=1445,1453,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.74269e-08;MQSB=0.932658;RPB=0.0449883;SGB=25.7969;VDB=0.77123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.9:22574971 chr09:022574971 0 W/22574971-22574971 FN2109-S SNP G -> A AC=1;AN=168;BQB=0.0101611;DP=4154;DP4=2116,1962,22,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.31853e-20;MQSB=0.907522;RPB=0.242727;SGB=-536.845;VDB=0.387823;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.9:22587361 chr09:022587361 0 W/22587361-22587361 FN4300-S SNP G -> A AC=1;AN=170;BQB=0.867001;DP=4164;DP4=1602,2428,15,14;HOB=6.92042e-05;ICB=0.000139222;MQ=22;MQ0F=0.247118;MQB=0.00343375;MQSB=4.58468e-25;RPB=0.30373;SGB=89.9604;VDB=0.429323;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A726V|980|LOC_Os09g39300|protein_coding|CODING|LOC_Os09g39300.1|3|1) FN2437.SNP.9:22590436 chr09:022590436 0 W/22590436-22590436 FN2437 SNP G -> A AC=1;AN=200;BQB=0.590661;DP=5137;DP4=2330,2346,15,15;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.149114;MQB=0.874873;MQSB=0;RPB=0.926011;SGB=-144.249;VDB=0.996032;EFF=INTERGENIC(MODIFIER||||||||||1) FN-62.SNP.9:22592537 chr09:022592537 0 W/22592537-22592537 FN-62 Single Base Substitution T-G INTERGENIC HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN-62.SNP.9:22592540 chr09:022592540 0 W/22592540-22592540 FN-62 Single Base Substitution A-T INTERGENIC HOMO SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN515-S.SNP.9:22593458 chr09:022593458 0 W/22593458-22593458 FN515-S Single Base Substitution T-A INTERGENIC HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN-189.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN-189 Single Base Substitution G-A INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1610-S.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN1610-S Single Base Substitution G-A INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2187-S.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN2187-S SNP G -> A AC=1;AN=190;BQB=0.441131;DP=3942;DP4=2116,1547,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000507357;MQB=3.43471e-10;MQSB=0.744517;RPB=0.767391;SGB=76.4186;VDB=0.883343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN2360 SNP G -> A AC=2;AN=192;BQB=0.520977;DP=4327;DP4=2237,1817,19,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.31488e-20;MQSB=0.95952;RPB=0.943827;SGB=177.012;VDB=0.378222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN3517-S SNP G -> A AC=2;AN=188;BQB=0.893156;DP=2377;DP4=1305,1022,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.30252e-08;MQSB=0.965505;RPB=0.833701;SGB=67.1521;VDB=0.725062;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN3717-S SNP G -> A AC=2;AN=190;BQB=0.933191;DP=2242;DP4=1214,942,3,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.75227e-05;MQSB=0.975209;RPB=0.651501;SGB=30.8803;VDB=0.394165;EFF=INTERGENIC(MODIFIER||||||||||1) FN994-S.SNP.9:22594118 chr09:022594118 0 W/22594118-22594118 FN994-S Single Base Substitution G-A INTERGENIC HOMO SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN1307-S.SNP.9:22597395 chr09:022597395 0 W/22597395-22597395 FN1307-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN477-S.SNP.9:22604201 chr09:022604201 0 W/22604201-22604201 FN477-S Single Base Substitution A-T INTRON HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2364.SNP.9:22609225 chr09:022609225 0 W/22609225-22609225 FN2364 SNP T -> C AC=1;AN=192;BQB=0.999983;DP=5296;DP4=2467,2538,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.56877e-14;MQSB=0.948265;RPB=0.981867;SGB=46.8644;VDB=0.457579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.9:22609784 chr09:022609784 0 W/22609784-22609784 FN3359-S SNP G -> T AC=1;AN=184;BQB=0.989968;DP=2193;DP4=1063,1022,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.55983e-05;MQSB=0.991557;RPB=0.374125;SGB=39.699;VDB=0.942396;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.9:22612979 chr09:022612979 0 W/22612979-22612979 FN-285 Single Base Substitution C-A INTRON HOMO SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN3818-S.SNP.9:22615310 chr09:022615310 0 W/22615310-22615310 FN3818-S SNP A -> G AC=1;AN=190;BQB=0.991768;DP=2774;DP4=1346,1342,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.49291e-11;MQSB=0.866928;RPB=0.758279;SGB=57.4238;VDB=0.229272;EFF=INTRON(MODIFIER||||915|LOC_Os09g39330|protein_coding|CODING|LOC_Os09g39330.1|8|1) FN2300.SNP.9:22629983 chr09:022629983 0 W/22629983-22629983 FN2300 SNP G -> C AC=1;AN=192;BQB=0.55474;DP=5191;DP4=2320,2540,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.32529e-06;MQSB=0.418214;RPB=0.780173;SGB=2.66176;VDB=0.536579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.9:22632214 chr09:022632214 0 W/22632214-22632214 FN3580-S SNP G -> A AC=1;AN=188;BQB=0.296023;DP=2765;DP4=1337,1381,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.62377e-05;MQSB=0.997021;RPB=0.901493;SGB=62.6088;VDB=0.783307;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y344|487|LOC_Os09g39350|protein_coding|CODING|LOC_Os09g39350.1|2|1),INTRON(MODIFIER||||172|LOC_Os09g39350|protein_coding|CODING|LOC_Os09g39350.2|1|1) FN2659-S.SNP.9:22634894 chr09:022634894 0 W/22634894-22634894 FN2659-S SNP G -> A AC=1;AN=200;BQB=0.977868;DP=4930;DP4=2211,2436,5,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.19563e-14;MQSB=0.835972;RPB=0.503658;SGB=95.7111;VDB=0.918442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.9:22635926 chr09:022635926 0 W/22635926-22635926 FN-402 Single Base Substitution C-T INTERGENIC HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1646-S.SNP.9:22635926 chr09:022635926 0 W/22635926-22635926 FN1646-S Single Base Substitution C-T START_GAINED HET LOC_Os09g39360 expressed protein SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN3509-S.SNP.9:22635926 chr09:022635926 0 W/22635926-22635926 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.609312;DP=3401;DP4=1483,1826,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.33372e-06;MQSB=0.983741;RPB=0.890505;SGB=62.6088;VDB=0.604541;EFF=START_GAINED(LOW||||101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1),UTR_5_PRIME(MODIFIER||1353||101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1) FN4138-S.SNP.9:22635926 chr09:022635926 0 W/22635926-22635926 FN4138-S SNP C -> T AC=1;AN=170;BQB=0.999913;DP=2455;DP4=1208,1165,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.29081e-08;MQSB=0.982122;RPB=0.502608;SGB=56.7575;VDB=0.884076;EFF=START_GAINED(LOW||||101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1),UTR_5_PRIME(MODIFIER||1353||101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1) FN3500-S.SNP.9:22637213 chr09:022637213 0 W/22637213-22637213 FN3500-S SNP T -> C AC=2;AN=188;BQB=0.945048;DP=2883;DP4=1222,1548,9,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.99704e-14;MQSB=0.925718;RPB=0.563752;SGB=103.498;VDB=0.808294;EFF=UTR_5_PRIME(MODIFIER||66||101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1) FN3285-S.SNP.9:22637575 chr09:022637575 0 W/22637575-22637575 FN3285-S SNP G -> T AC=1;AN=184;BQB=0.970284;DP=2911;DP4=1270,1496,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37557e-06;MQSB=0.999543;RPB=0.836623;SGB=48.7425;VDB=0.614492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W99C|101|LOC_Os09g39360|protein_coding|CODING|LOC_Os09g39360.1|1|1) FN4235-S.SNP.9:22641887 chr09:022641887 0 W/22641887-22641887 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.915823;DP=2090;DP4=1107,925,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.12866e-07;MQSB=0.86899;RPB=0.5925;SGB=38.987;VDB=0.956308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.9:22642418 chr09:022642418 0 W/22642418-22642418 FN1047-S Single Base Substitution G-T INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN516-S.SNP.9:22645323 chr09:022645323 0 W/22645323-22645323 FN516-S Single Base Substitution G-T INTRON HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN3473-S.SNP.9:22650334 chr09:022650334 0 W/22650334-22650334 FN3473-S SNP G -> T AC=1;AN=184;BQB=0.716789;DP=2612;DP4=1298,1237,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.99771e-07;MQSB=0.996055;RPB=0.400851;SGB=48.7425;VDB=0.905193;EFF=INTRON(MODIFIER||||385|LOC_Os09g39390|protein_coding|CODING|LOC_Os09g39390.1|3|1) FN-284.SNP.9:22652097 chr09:022652097 0 W/22652097-22652097 FN-284 Single Base Substitution T-G INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN853-S.SNP.9:22670729 chr09:022670729 0 W/22670729-22670729 FN853-S Single Base Substitution G-A INTRON HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3667-S.SNP.9:22670836 chr09:022670836 0 W/22670836-22670836 FN3667-S SNP G -> T AC=1;AN=190;BQB=0.892512;DP=2844;DP4=1485,1220,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.04576e-07;MQSB=0.996881;RPB=0.362482;SGB=25.439;VDB=0.42619;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R915M|975|LOC_Os09g39420|protein_coding|CODING|LOC_Os09g39420.1|10|1) FN1718-S.SNP.9:22684396 chr09:022684396 0 W/22684396-22684396 FN1718-S SNP C -> T AC=1;AN=188;BQB=0.833892;DP=3718;DP4=2077,1604,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71394e-10;MQSB=0.705402;RPB=0.738526;SGB=11.7114;VDB=0.670683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S244F|455|LOC_Os09g39462|protein_coding|CODING|LOC_Os09g39462.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S244F|455|LOC_Os09g39462|protein_coding|CODING|LOC_Os09g39462.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S244F|317|LOC_Os09g39462|protein_coding|CODING|LOC_Os09g39462.3|2|1) FN3751-S.SNP.9:22687106 chr09:022687106 0 W/22687106-22687106 FN3751-S SNP C -> T AC=1;AN=190;BQB=0.94499;DP=2542;DP4=1242,1209,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13064e-06;MQSB=0.883682;RPB=0.999832;SGB=35.4339;VDB=0.628185;EFF=UTR_3_PRIME(MODIFIER||1266||455|LOC_Os09g39462|protein_coding|CODING|LOC_Os09g39462.1|6|1) FN3751-S.SNP.9:22687108 chr09:022687108 0 W/22687108-22687108 FN3751-S SNP T -> C AC=1;AN=190;BQB=0.711884;DP=2565;DP4=1172,1188,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74136e-06;MQSB=0.878242;RPB=0.925379;SGB=15.9981;VDB=0.484415;EFF=UTR_3_PRIME(MODIFIER||1268||455|LOC_Os09g39462|protein_coding|CODING|LOC_Os09g39462.1|6|1) FN2640-S.SNP.9:22688211 chr09:022688211 0 W/22688211-22688211 FN2640-S SNP C -> T AC=1;AN=200;BQB=0.653709;DP=4122;DP4=1816,1907,17,20;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.27138e-17;MQSB=7.96272e-06;RPB=0.933637;SGB=164.789;VDB=0.344892;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V41|221|LOC_Os09g39474|protein_coding|CODING|LOC_Os09g39474.1|1|1) FN2781-S.SNP.9:22689733 chr09:022689733 0 W/22689733-22689733 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.991518;DP=4456;DP4=2019,2163,9,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.73498e-14;MQSB=0.926458;RPB=0.896842;SGB=118.476;VDB=0.791905;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.9:22690282 chr09:022690282 0 W/22690282-22690282 FN825-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN501-S.SNP.9:22697818 chr09:022697818 0 W/22697818-22697818 FN501-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os09g39520 Cupin domain containing protein, expressed SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN-128.SNP.9:22699816 chr09:022699816 0 W/22699816-22699816 FN-128 Single Base Substitution A-T INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN2251-S.SNP.9:22704889 chr09:022704889 0 W/22704889-22704889 FN2251-S SNP G -> T AC=1;AN=190;BQB=0.130153;DP=5155;DP4=2407,2381,4,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41562e-06;MQSB=0.243904;RPB=0.835706;SGB=-61.7653;VDB=0.993539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K54N|123|LOC_Os09g39550|protein_coding|CODING|LOC_Os09g39550.1|2|1),SPLICE_SITE_REGION(LOW||||123|LOC_Os09g39550|protein_coding|CODING|LOC_Os09g39550.1|2|1) FN775-S.SNP.9:22708175 chr09:022708175 0 W/22708175-22708175 FN775-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os09g39560 genetic modifier, putative, expressed SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN566-S.SNP.9:22714759 chr09:022714759 0 W/22714759-22714759 FN566-S Single Base Substitution G-A INTRON HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-294.SNP.9:22714848 chr09:022714848 0 W/22714848-22714848 FN-294 Single Base Substitution T-G INTRON HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN3292-S.SNP.9:22717510 chr09:022717510 0 W/22717510-22717510 FN3292-S SNP C -> A AC=1;AN=184;BQB=0.910827;DP=3060;DP4=1324,1620,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.55412e-10;MQSB=0.804307;RPB=0.93107;SGB=66.8296;VDB=0.917495;EFF=UTR_3_PRIME(MODIFIER||1355||273|LOC_Os09g39580|protein_coding|CODING|LOC_Os09g39580.1|2|1) FN3292-S.SNP.9:22717512 chr09:022717512 0 W/22717512-22717512 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.680966;DP=3066;DP4=1344,1631,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.7942e-11;MQSB=0.903905;RPB=0.93887;SGB=71.3514;VDB=0.873398;EFF=UTR_3_PRIME(MODIFIER||1353||273|LOC_Os09g39580|protein_coding|CODING|LOC_Os09g39580.1|2|1) FN537-S.SNP.9:22743705 chr09:022743705 0 W/22743705-22743705 FN537-S Single Base Substitution C-A INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN537-S.SNP.9:22743706 chr09:022743706 0 W/22743706-22743706 FN537-S Single Base Substitution C-A INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN2155-S.SNP.9:22745901 chr09:022745901 0 W/22745901-22745901 FN2155-S SNP T -> A AC=1;AN=168;BQB=0.0662372;DP=3837;DP4=1780,2016,9,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.32417e-10;MQSB=0.997741;RPB=0.986781;SGB=-77.4832;VDB=0.164838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.9:22748715 chr09:022748715 0 W/22748715-22748715 FN1614-S Single Base Substitution T-C INTRON Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN731-S.SNP.9:22752086 chr09:022752086 0 W/22752086-22752086 FN731-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2309.SNP.9:22753455 chr09:022753455 0 W/22753455-22753455 FN2309 SNP T -> C AC=1;AN=192;BQB=0.982067;DP=5169;DP4=2475,2449,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.06343e-09;MQSB=0.919605;RPB=0.811448;SGB=4.22611;VDB=0.0866911;EFF=UTR_5_PRIME(MODIFIER||159||615|LOC_Os09g39650|protein_coding|CODING|LOC_Os09g39650.3|1|1),UTR_5_PRIME(MODIFIER||159||615|LOC_Os09g39650|protein_coding|CODING|LOC_Os09g39650.2|1|1),UTR_5_PRIME(MODIFIER||159||615|LOC_Os09g39650|protein_coding|CODING|LOC_Os09g39650.1|1|1) FN1410-S.SNP.9:22762737 chr09:022762737 0 W/22762737-22762737 FN1410-S Single Base Substitution T-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN483-S.SNP.9:22762947 chr09:022762947 0 W/22762947-22762947 FN483-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2734-S.SNP.9:22769246 chr09:022769246 0 W/22769246-22769246 FN2734-S SNP A -> C AC=1;AN=200;BQB=0.063394;DP=4994;DP4=2523,2048,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.27173e-10;MQSB=0.0154432;RPB=0.155114;SGB=-58.3105;VDB=0.650456;EFF=INTRON(MODIFIER||||591|LOC_Os09g39680|protein_coding|CODING|LOC_Os09g39680.1|4|1) FN581-S.SNP.9:22777096 chr09:022777096 0 W/22777096-22777096 FN581-S Single Base Substitution T-G INTRON HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-346.SNP.9:22777857 chr09:022777857 0 W/22777857-22777857 FN-346 Single Base Substitution G-C INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN4312-S.SNP.9:22783791 chr09:022783791 0 W/22783791-22783791 FN4312-S SNP A -> T AC=2;AN=170;BQB=0.693006;DP=2535;DP4=1147,1318,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.46174e-17;MQSB=0.977796;RPB=0.764056;SGB=114.512;VDB=0.456309;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.9:22783792 chr09:022783792 0 W/22783792-22783792 FN4312-S SNP A -> T AC=2;AN=170;BQB=0.996945;DP=2533;DP4=1145,1301,14,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.59793e-18;MQSB=0.975125;RPB=0.872194;SGB=86.5178;VDB=0.44026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.9:22784991 chr09:022784991 0 W/22784991-22784991 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.490608;DP=4826;DP4=2361,2201,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207211;MQB=7.55604e-13;MQSB=0.974313;RPB=0.258296;SGB=47.7211;VDB=0.580133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3758-S.SNP.9:22785139 chr09:022785139 0 W/22785139-22785139 FN3758-S SNP G -> A AC=2;AN=190;BQB=0.898391;DP=2644;DP4=1253,1268,18,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.79286e-18;MQSB=0.990486;RPB=0.868978;SGB=110.732;VDB=0.599837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D35N|385|LOC_Os09g39710|protein_coding|CODING|LOC_Os09g39710.1|1|1) FN1357-S.SNP.9:22794953 chr09:022794953 0 W/22794953-22794953 FN1357-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3902-S.SNP.9:22800631 chr09:022800631 0 W/22800631-22800631 FN3902-S SNP C -> G AC=1;AN=158;BQB=0.530473;DP=2339;DP4=1258,998,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.79338e-06;MQSB=0.997873;RPB=0.925283;SGB=0.716704;VDB=0.462635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E478D|519|LOC_Os09g39750|protein_coding|CODING|LOC_Os09g39750.1|2|1) FN627-S.SNP.9:22815773 chr09:022815773 0 W/22815773-22815773 FN627-S Single Base Substitution G-A INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN4010-S.SNP.9:22816007 chr09:022816007 0 W/22816007-22816007 FN4010-S SNP C -> T AC=1;AN=168;BQB=0.833001;DP=3309;DP4=1546,1617,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.1736e-13;MQSB=0.772341;RPB=0.225739;SGB=48.9237;VDB=0.553758;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.9:22823835 chr09:022823835 0 W/22823835-22823835 FN718-S Single Base Substitution G-T INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1023-S.SNP.9:22825276 chr09:022825276 0 W/22825276-22825276 FN1023-S Single Base Substitution G-A INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2089-S.SNP.9:22825450 chr09:022825450 0 W/22825450-22825450 FN2089-S SNP C -> T AC=1;AN=168;BQB=0.639883;DP=3754;DP4=2014,1706,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.51162e-15;MQSB=0.966798;RPB=0.898914;SGB=17.068;VDB=0.424521;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.9:22826158 chr09:022826158 0 W/22826158-22826158 FN785-S Single Base Substitution A-G INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN944-S.SNP.9:22829906 chr09:022829906 0 W/22829906-22829906 FN944-S Single Base Substitution C-T INTRON HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3722-S.SNP.9:22829924 chr09:022829924 0 W/22829924-22829924 FN3722-S SNP C -> G AC=2;AN=190;BQB=0.899104;DP=2572;DP4=1329,1169,6,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81396e-08;MQSB=0.957528;RPB=0.895095;SGB=53.6492;VDB=0.0848216;EFF=INTRON(MODIFIER||||1577|LOC_Os09g39820|protein_coding|CODING|LOC_Os09g39820.1|1|1) FN3776-S.SNP.9:22831291 chr09:022831291 0 W/22831291-22831291 FN3776-S SNP C -> T AC=1;AN=190;BQB=0.905201;DP=3137;DP4=1488,1550,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.08834e-07;MQSB=0.924845;RPB=0.798565;SGB=39.9877;VDB=0.482741;EFF=INTRON(MODIFIER||||1577|LOC_Os09g39820|protein_coding|CODING|LOC_Os09g39820.1|3|1) FN2634-S.SNP.9:22833921 chr09:022833921 0 W/22833921-22833921 FN2634-S SNP C -> A AC=2;AN=200;BQB=0.307711;DP=4634;DP4=2144,2180,32,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.08627e-22;MQSB=0.448048;RPB=0.757777;SGB=213.318;VDB=0.287143;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P1319T|1577|LOC_Os09g39820|protein_coding|CODING|LOC_Os09g39820.1|6|1) FN2121-S.SNP.9:22836044 chr09:022836044 0 W/22836044-22836044 FN2121-S SNP C -> T AC=1;AN=166;BQB=0.927844;DP=1545;DP4=702,800,3,3;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=0.000353135;MQSB=0.790883;RPB=0.661384;SGB=21.16;VDB=0.191363;EFF=INTRON(MODIFIER||||758|LOC_Os09g39830|protein_coding|CODING|LOC_Os09g39830.1|4|1) FN438-S.SNP.9:22837421 chr09:022837421 0 W/22837421-22837421 FN438-S Single Base Substitution C-T INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN3856-S.SNP.9:22849588 chr09:022849588 0 W/22849588-22849588 FN3856-S SNP T -> C AC=1;AN=158;BQB=0.368199;DP=2156;DP4=1165,935,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=0.00617329;MQSB=0.306376;RPB=0.901778;SGB=23.9652;VDB=0.356498;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.9:22851547 chr09:022851547 0 W/22851547-22851547 FN3856-S SNP G -> T AC=1;AN=158;BQB=0.988196;DP=2198;DP4=1028,1109,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000217039;MQSB=0.668997;RPB=0.798495;SGB=25.2211;VDB=0.806316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.9:22860772 chr09:022860772 0 W/22860772-22860772 FN2703-S SNP G -> A AC=2;AN=200;BQB=0.501074;DP=4506;DP4=1987,2220,29,29;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.08307e-15;MQSB=0.989429;RPB=0.832041;SGB=73.6967;VDB=0.929214;EFF=INTERGENIC(MODIFIER||||||||||1) FN1596-S.SNP.9:22865355 chr09:022865355 0 W/22865355-22865355 FN1596-S Single Base Substitution C-A INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN500-S.SNP.9:22874562 chr09:022874562 0 W/22874562-22874562 FN500-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os09g39900 retrotransposon protein, putative, unclassified, expressed SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4143-S.SNP.9:22881990 chr09:022881990 0 W/22881990-22881990 FN4143-S SNP C -> T AC=2;AN=170;BQB=0.971345;DP=2483;DP4=1163,1192,21,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.75997e-18;MQSB=0.971516;RPB=0.758512;SGB=28.8575;VDB=0.731296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.9:22885242 chr09:022885242 0 W/22885242-22885242 FN2560-S SNP A -> T AC=1;AN=198;BQB=0.678732;DP=4364;DP4=2271,1923,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.37089e-06;MQSB=0.994844;RPB=0.625763;SGB=25.7687;VDB=0.321667;EFF=INTRON(MODIFIER||||575|LOC_Os09g39910|protein_coding|CODING|LOC_Os09g39910.1|4|1),INTRON(MODIFIER||||575|LOC_Os09g39910|protein_coding|CODING|LOC_Os09g39910.2|4|1),INTRON(MODIFIER||||471|LOC_Os09g39910|protein_coding|CODING|LOC_Os09g39910.3|3|1) FN628-S.SNP.9:22888803 chr09:022888803 0 W/22888803-22888803 FN628-S Single Base Substitution C-T INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN500-S.SNP.9:22890150 chr09:022890150 0 W/22890150-22890150 FN500-S Single Base Substitution T-C INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1677-S.SNP.9:22897682 chr09:022897682 0 W/22897682-22897682 FN1677-S SNP G -> A AC=1;AN=188;BQB=0.910439;DP=1657;DP4=909,700,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.37979e-06;MQSB=0.788012;RPB=0.698539;SGB=35.3493;VDB=0.322751;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R63|541|LOC_Os09g39920|protein_coding|CODING|LOC_Os09g39920.1|1|1) FN-115.SNP.9:22906575 chr09:022906575 0 W/22906575-22906575 FN-115 Single Base Substitution A-G INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN-335.SNP.9:22921082 chr09:022921082 0 W/22921082-22921082 FN-335 Single Base Substitution T-C INTRON HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1529-S.SNP.9:22924532 chr09:022924532 0 W/22924532-22924532 FN1529-S Single Base Substitution G-C INTRON Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3530-S.SNP.9:22937483 chr09:022937483 0 W/22937483-22937483 FN3530-S SNP T -> C AC=1;AN=188;BQB=0.990783;DP=2807;DP4=1386,1330,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.43733e-13;MQSB=0.826867;RPB=0.994827;SGB=60.7873;VDB=0.686289;EFF=UTR_3_PRIME(MODIFIER||111||453|LOC_Os09g40000|protein_coding|CODING|LOC_Os09g40000.2|6|1),INTRON(MODIFIER||||616|LOC_Os09g40000|protein_coding|CODING|LOC_Os09g40000.1|6|1),INTRON(MODIFIER||||349|LOC_Os09g40000|protein_coding|CODING|LOC_Os09g40000.3|5|1) FN416-S.SNP.10:2550 chr10:000002550 0 W/2550-2550 FN416-S Single Base Substitution T-G INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3860-S.SNP.10:13514 chr10:000013514 0 W/13514-13514 FN3860-S SNP G -> T AC=1;AN=158;BQB=0.912745;DP=2410;DP4=1143,1173,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.16888;MQB=0.90565;MQSB=1.35295e-08;RPB=0.99568;SGB=68.9144;VDB=0.188406;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.10:16534 chr10:000016534 0 W/16534-16534 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.390012;DP=3203;DP4=1383,1698,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0552607;MQB=0.328877;MQSB=0.0338611;RPB=0.732331;SGB=25.1826;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.10:21876 chr10:000021876 0 W/21876-21876 FN1385-S Single Base Substitution G-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN2254-S.SNP.10:22640 chr10:000022640 0 W/22640-22640 FN2254-S SNP C -> A AC=1;AN=190;BQB=0.982417;DP=5197;DP4=2290,2526,7,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.68247e-13;MQSB=0.985693;RPB=0.91811;SGB=44.0907;VDB=0.163497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.10:26902 chr10:000026902 0 W/26902-26902 FN1559-S Single Base Substitution G-A INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN896-S.SNP.10:31612 chr10:000031612 0 W/31612-31612 FN896-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g01020 retrotransposon protein, putative, unclassified, expressed SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2220-S.SNP.10:33570 chr10:000033570 0 W/33570-33570 FN2220-S SNP G -> T AC=1;AN=190;BQB=0.99349;DP=5072;DP4=2637,2177,20,19;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0106467;MQB=3.22945e-10;MQSB=0.881403;RPB=0.813421;SGB=41.4042;VDB=0.468263;EFF=INTRON(MODIFIER||||1991|LOC_Os10g01020|protein_coding|CODING|LOC_Os10g01020.1|4|1) FN3916-S.SNP.10:37619 chr10:000037619 0 W/37619-37619 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.732077;DP=2229;DP4=1151,974,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.00762674;MQB=0.867015;MQSB=1.22516e-06;RPB=0.801307;SGB=9.60209;VDB=0.798199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.10:38987 chr10:000038987 0 W/38987-38987 FN2316 SNP C -> T AC=1;AN=192;BQB=0.57391;DP=4662;DP4=2425,1919,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.38241e-16;MQSB=0.592971;RPB=0.968765;SGB=27.6913;VDB=0.399387;EFF=INTRON(MODIFIER||||211|LOC_Os10g01030|protein_coding|CODING|LOC_Os10g01030.1|3|1) FN-193.SNP.10:43559 chr10:000043559 0 W/43559-43559 FN-193 Single Base Substitution A-G INTERGENIC HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1251-S.SNP.10:50859 chr10:000050859 0 W/50859-50859 FN1251-S Single Base Substitution A-T INTRON HOMO SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN-370.SNP.10:51024 chr10:000051024 0 W/51024-51024 FN-370 Single Base Substitution T-A INTRON HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN489-S.SNP.10:55327 chr10:000055327 0 W/55327-55327 FN489-S Single Base Substitution T-A INTRON HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN-283.SNP.10:58524 chr10:000058524 0 W/58524-58524 FN-283 Single Base Substitution C-A INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. W276-2-1.SNP.10:64249 chr10:000064249 0 W/64249-64249 W276-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1464-S.SNP.10:64523 chr10:000064523 0 W/64523-64523 FN1464-S Single Base Substitution C-T INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2265-S.SNP.10:66235 chr10:000066235 0 W/66235-66235 FN2265-S SNP C -> A AC=1;AN=190;BQB=0.986285;DP=4531;DP4=2328,1868,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000220702;MQB=7.54553e-12;MQSB=0.025409;RPB=0.760495;SGB=60.9777;VDB=0.481388;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.10:66899 chr10:000066899 0 W/66899-66899 FN1434-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3325-S.SNP.10:71078 chr10:000071078 0 W/71078-71078 FN3325-S SNP T -> G AC=1;AN=184;BQB=0.78863;DP=2822;DP4=1289,1431,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.61159e-13;MQSB=0.911351;RPB=0.26598;SGB=-11.5833;VDB=0.744474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgT/tgG|C456W|811|LOC_Os10g01060|protein_coding|CODING|LOC_Os10g01060.1|6|1) FN872-S.SNP.10:79949 chr10:000079949 0 W/79949-79949 FN872-S Single Base Substitution A-T INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1227-S.SNP.10:82899 chr10:000082899 0 W/82899-82899 FN1227-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-97.SNP.10:85615 chr10:000085615 0 W/85615-85615 FN-97 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g01090 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN2560-S.SNP.10:85879 chr10:000085879 0 W/85879-85879 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.00302583;DP=4117;DP4=2266,1617,45,5;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0111732;MQB=9.6507e-28;MQSB=0.953918;RPB=5.23477e-13;SGB=-1358.95;VDB=4.0136e-08;EFF=INTRON(MODIFIER||||191|LOC_Os10g01090|protein_coding|CODING|LOC_Os10g01090.1|1|1) FN892-S.SNP.10:90116 chr10:000090116 0 W/90116-90116 FN892-S Single Base Substitution T-A INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2488.SNP.10:90497 chr10:000090497 0 W/90497-90497 FN2488 SNP A -> G AC=1;AN=200;BQB=0.737127;DP=4718;DP4=2396,2105,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35714e-11;MQSB=0.776356;RPB=0.824447;SGB=32.0901;VDB=0.179762;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.10:90655 chr10:000090655 0 W/90655-90655 FN1227-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1215-S.SNP.10:93931 chr10:000093931 0 W/93931-93931 FN1215-S Single Base Substitution C-T INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN968-S.SNP.10:93931 chr10:000093931 0 W/93931-93931 FN968-S Single Base Substitution C-T INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN2344.SNP.10:94869 chr10:000094869 0 W/94869-94869 FN2344 SNP G -> T AC=1;AN=192;BQB=0.928623;DP=4371;DP4=2154,2021,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.72711e-12;MQSB=0.422194;RPB=0.99965;SGB=68.2948;VDB=0.260503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Ttg|V8L|853|LOC_Os10g01100|protein_coding|CODING|LOC_Os10g01100.1|1|1) FN430-S.SNP.10:100241 chr10:000100241 0 W/100241-100241 FN430-S Single Base Substitution G-C INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3789-S.SNP.10:112271 chr10:000112271 0 W/112271-112271 FN3789-S SNP G -> C AC=1;AN=190;BQB=0.970301;DP=2789;DP4=1386,1295,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.61915e-07;MQSB=0.963849;RPB=0.359213;SGB=53.6492;VDB=0.700822;EFF=INTRON(MODIFIER||||472|LOC_Os10g01134|protein_coding|CODING|LOC_Os10g01134.1|1|1),INTRON(MODIFIER||||374|LOC_Os10g01134|protein_coding|CODING|LOC_Os10g01134.2|1|1) FN1525-S.SNP.10:112595 chr10:000112595 0 W/112595-112595 FN1525-S Single Base Substitution C-T INTRON HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3534-S.SNP.10:113201 chr10:000113201 0 W/113201-113201 FN3534-S SNP T -> A AC=1;AN=188;BQB=0.988328;DP=3114;DP4=1352,1644,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.89116e-13;MQSB=0.996138;RPB=0.122082;SGB=94.4119;VDB=0.106846;EFF=INTRON(MODIFIER||||472|LOC_Os10g01134|protein_coding|CODING|LOC_Os10g01134.1|1|1),INTRON(MODIFIER||||374|LOC_Os10g01134|protein_coding|CODING|LOC_Os10g01134.2|1|1) FN2276-S.SNP.10:120484 chr10:000120484 0 W/120484-120484 FN2276-S SNP G -> A AC=1;AN=190;BQB=0.949975;DP=3726;DP4=2151,1284,24,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.37063e-12;MQSB=3.47121e-19;RPB=0.307229;SGB=135.619;VDB=0.246314;EFF=INTERGENIC(MODIFIER||||||||||1) FN4311-S.SNP.10:124216 chr10:000124216 0 W/124216-124216 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.904195;DP=2686;DP4=1303,1323,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00132859;MQSB=0.992641;RPB=0.979185;SGB=25.6601;VDB=0.374894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2541-S.SNP.10:127063 chr10:000127063 0 W/127063-127063 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.545397;DP=3924;DP4=1687,1968,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.4878e-08;MQSB=0.997409;RPB=0.983894;SGB=24.1541;VDB=0.0368116;EFF=INTERGENIC(MODIFIER||||||||||1) FN3526-S.SNP.10:129435 chr10:000129435 0 W/129435-129435 FN3526-S SNP G -> A AC=1;AN=188;BQB=0.998261;DP=2646;DP4=1429,1153,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00113379;MQB=3.80542e-07;MQSB=0.153192;RPB=0.945704;SGB=26.0762;VDB=0.276451;EFF=INTERGENIC(MODIFIER||||||||||1) FN1220-S.SNP.10:131393 chr10:000131393 0 W/131393-131393 FN1220-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN721-S.SNP.10:131611 chr10:000131611 0 W/131611-131611 FN721-S Single Base Substitution C-T INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN948-S.SNP.10:132183 chr10:000132183 0 W/132183-132183 FN948-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g01200 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN4182-S.SNP.10:134021 chr10:000134021 0 W/134021-134021 FN4182-S SNP G -> A AC=1;AN=170;BQB=0.957912;DP=2545;DP4=1164,1296,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.34216e-07;MQSB=0.143517;RPB=0.981516;SGB=52.3148;VDB=0.198193;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.10:134377 chr10:000134377 0 W/134377-134377 FN765-S Single Base Substitution C-A INTRON HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN2572-S.SNP.10:137396 chr10:000137396 0 W/137396-137396 FN2572-S SNP G -> C AC=1;AN=198;BQB=0.358748;DP=3314;DP4=1705,1336,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00030175;MQB=2.39009e-14;MQSB=0.486176;RPB=0.890252;SGB=123.071;VDB=0.149883;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.10:137555 chr10:000137555 0 W/137555-137555 W42-1-3S-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2715-S.SNP.10:142035 chr10:000142035 0 W/142035-142035 FN2715-S SNP C -> A AC=1;AN=200;BQB=0.906683;DP=4829;DP4=2498,2056,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.17308e-10;MQSB=0.986814;RPB=0.893826;SGB=34.6953;VDB=0.336652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2254-S.SNP.10:142861 chr10:000142861 0 W/142861-142861 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.66237;DP=4939;DP4=2495,2153,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.68858e-12;MQSB=0.857866;RPB=0.926143;SGB=57.4238;VDB=0.501602;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.10:144661 chr10:000144661 0 W/144661-144661 FN483-S Single Base Substitution T-A INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN631-S.SNP.10:148745 chr10:000148745 0 W/148745-148745 FN631-S Single Base Substitution G-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1583-S.SNP.10:158827 chr10:000158827 0 W/158827-158827 FN1583-S Single Base Substitution A-G INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3288-S.SNP.10:159666 chr10:000159666 0 W/159666-159666 FN3288-S SNP C -> T AC=2;AN=184;BQB=0.799124;DP=2992;DP4=1665,1226,12,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.06317e-15;MQSB=0.956534;RPB=0.450876;SGB=78.0093;VDB=0.55346;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.10:160901 chr10:000160901 0 W/160901-160901 FN3370-S SNP G -> A AC=1;AN=184;BQB=0.97956;DP=3943;DP4=1634,2199,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.85211e-05;MQSB=0.970435;RPB=0.978866;SGB=21.6609;VDB=0.190636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.10:166536 chr10:000166536 0 W/166536-166536 FN1481-S Single Base Substitution T-C INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN948-S.SNP.10:170555 chr10:000170555 0 W/170555-170555 FN948-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g01260 retrotransposon protein, putative, unclassified, expressed SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3748-S.SNP.10:171442 chr10:000171442 0 W/171442-171442 FN3748-S SNP T -> C AC=1;AN=190;BQB=0.910836;DP=2877;DP4=1451,1321,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99931e-07;MQSB=0.959546;RPB=0.98793;SGB=44.5415;VDB=0.574293;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L44|218|LOC_Os10g01260|protein_coding|CODING|LOC_Os10g01260.1|1|1) FN796-S.SNP.10:172771 chr10:000172771 0 W/172771-172771 FN796-S Single Base Substitution T-A INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN4134-S.SNP.10:182440 chr10:000182440 0 W/182440-182440 FN4134-S SNP C -> T AC=2;AN=182;BQB=0.987502;DP=3036;DP4=1585,1354,10,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.83057e-15;MQSB=0.961936;RPB=0.759886;SGB=116.285;VDB=0.932134;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.10:184297 chr10:000184297 0 W/184297-184297 FN-168 Single Base Substitution C-T INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1234-S.SNP.10:192464 chr10:000192464 0 W/192464-192464 FN1234-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g01300 retrotransposon protein, putative, unclassified, expressed SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN4130-S.SNP.10:192464 chr10:000192464 0 W/192464-192464 FN4130-S SNP C -> G AC=2;AN=182;BQB=0.845638;DP=3174;DP4=1609,1473,15,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.27362e-13;MQSB=0.341046;RPB=0.99814;SGB=81.2689;VDB=0.61017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C544W|586|LOC_Os10g01300|protein_coding|CODING|LOC_Os10g01300.1|2|1) FN1758-S.SNP.10:196338 chr10:000196338 0 W/196338-196338 FN1758-S SNP G -> A AC=1;AN=188;BQB=0.706754;DP=2647;DP4=1166,1427,21,6;HOB=5.65867e-05;ICB=0.000113775;MQ=11;MQ0F=0.551568;MQB=0.000699548;MQSB=0;RPB=0.456525;SGB=-40.5615;VDB=0.526412;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.10:201534 chr10:000201534 0 W/201534-201534 FN1514-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os10g01330 retrotransposon protein, putative, unclassified, expressed SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3548-S.SNP.10:201691 chr10:000201691 0 W/201691-201691 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.933945;DP=3544;DP4=1839,1630,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.34027e-11;MQSB=0.980996;RPB=0.968752;SGB=76.2387;VDB=0.058269;EFF=INTRON(MODIFIER||||362|LOC_Os10g01330|protein_coding|CODING|LOC_Os10g01330.1|4|1) FN3883-S.SNP.10:208038 chr10:000208038 0 W/208038-208038 FN3883-S SNP T -> G AC=1;AN=158;BQB=0.683481;DP=2165;DP4=1023,1050,8,1;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.14387e-05;MQSB=0.990579;RPB=0.796491;SGB=33.9591;VDB=0.743634;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.10:215274 chr10:000215274 0 W/215274-215274 FN837-S Single Base Substitution G-A INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3865-S.SNP.10:220657 chr10:000220657 0 W/220657-220657 FN3865-S SNP C -> T AC=1;AN=158;BQB=0.842714;DP=2576;DP4=1146,1326,15,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.50452e-14;MQSB=0.982226;RPB=0.450421;SGB=19.889;VDB=0.506701;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.10:224437 chr10:000224437 0 W/224437-224437 FN_829-2-5 Single Base Substitution G-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3830-S.SNP.10:227294 chr10:000227294 0 W/227294-227294 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.936114;DP=3413;DP4=1695,1601,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000292997;MQB=1.19374e-07;MQSB=0.894925;RPB=0.363219;SGB=46.7622;VDB=0.000511399;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.10:232458 chr10:000232458 0 W/232458-232458 FN499-S Single Base Substitution G-A INTRON HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2374.SNP.10:232690 chr10:000232690 0 W/232690-232690 FN2374 SNP T -> C AC=2;AN=192;BQB=0.545772;DP=4966;DP4=2559,2140,23,17;HOB=0.0206163;ICB=0.494846;MQ=28;MQ0F=0.165324;MQB=0.12243;MQSB=0.854796;RPB=0.0581677;SGB=132.453;VDB=0.412365;EFF=INTRON(MODIFIER||||369|LOC_Os10g01380|protein_coding|CODING|LOC_Os10g01380.1|7|1) FN454-S.SNP.10:235156 chr10:000235156 0 W/235156-235156 FN454-S Single Base Substitution G-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN2240-S.SNP.10:236261 chr10:000236261 0 W/236261-236261 FN2240-S SNP C -> A AC=2;AN=190;BQB=0.906155;DP=4578;DP4=2366,1931,19,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00720839;MQB=2.51151e-09;MQSB=4.78606e-06;RPB=0.994486;SGB=64.5217;VDB=0.393226;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.10:240383 chr10:000240383 0 W/240383-240383 FN2533-S SNP A -> G AC=1;AN=186;BQB=0.99134;DP=3731;DP4=2028,1315,12,8;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=9.05707e-08;MQSB=0.0123396;RPB=0.723794;SGB=-36.6405;VDB=0.37726;EFF=INTRON(MODIFIER||||315|LOC_Os10g01390|protein_coding|CODING|LOC_Os10g01390.1|3|1) FN-291.SNP.10:242952 chr10:000242952 0 W/242952-242952 FN-291 Single Base Substitution G-A INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN3697-S.SNP.10:245572 chr10:000245572 0 W/245572-245572 FN3697-S SNP C -> G AC=1;AN=190;BQB=0.993676;DP=1995;DP4=1277,655,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00150376;MQB=1.51983e-06;MQSB=0.481118;RPB=0.647649;SGB=44.5415;VDB=0.404531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.10:246162 chr10:000246162 0 W/246162-246162 FN2730-S SNP A -> G AC=1;AN=200;BQB=0.997077;DP=4877;DP4=2199,2465,5,8;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0215296;MQB=0.0971888;MQSB=0.951595;RPB=0.996258;SGB=36.6644;VDB=0.336041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.10:246348 chr10:000246348 0 W/246348-246348 FN2378 SNP T -> G AC=1;AN=192;BQB=0.515046;DP=4598;DP4=2450,1830,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00413223;MQB=0.0209952;MQSB=0.151702;RPB=0.642916;SGB=39.1713;VDB=0.221831;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.10:249258 chr10:000249258 0 W/249258-249258 FN661-S Single Base Substitution T-C INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN3780-S.SNP.10:253533 chr10:000253533 0 W/253533-253533 FN3780-S SNP C -> T AC=1;AN=190;BQB=0.963646;DP=2376;DP4=870,1217,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00841751;MQB=0.0234114;MQSB=0.559093;RPB=0.933808;SGB=46.7622;VDB=0.297272;EFF=INTERGENIC(MODIFIER||||||||||1) FN712-S.SNP.10:253726 chr10:000253726 0 W/253726-253726 FN712-S Single Base Substitution C-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2158-S.SNP.10:255364 chr10:000255364 0 W/255364-255364 FN2158-S SNP A -> G AC=1;AN=168;BQB=0.441849;DP=3755;DP4=2071,1643,18,5;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00159787;MQB=2.53985e-05;MQSB=4.56945e-20;RPB=0.755585;SGB=14.2064;VDB=0.329986;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.10:258247 chr10:000258247 0 W/258247-258247 FN1399-S Single Base Substitution G-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3469-S.SNP.10:258545 chr10:000258545 0 W/258545-258545 FN3469-S SNP G -> A AC=1;AN=184;BQB=0.999925;DP=3169;DP4=1863,1206,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.25023e-08;MQSB=0.997704;RPB=0.9816;SGB=23.2751;VDB=0.579506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.10:260200 chr10:000260200 0 W/260200-260200 FN2742-S SNP G -> C AC=1;AN=200;BQB=0.98221;DP=4593;DP4=2272,2055,17,2;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0191596;MQB=0.412504;MQSB=3.59923e-19;RPB=0.108867;SGB=81.8956;VDB=0.104408;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcC|S69|162|LOC_Os10g01430|protein_coding|CODING|LOC_Os10g01430.1|1|1) FN3630-S.SNP.10:264609 chr10:000264609 0 W/264609-264609 FN3630-S SNP C -> A AC=2;AN=190;BQB=0.863836;DP=2869;DP4=1673,1103,13,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.77578e-10;MQSB=0.144583;RPB=0.6225;SGB=71.8647;VDB=0.315431;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.10:264628 chr10:000264628 0 W/264628-264628 FN1656-S Single Base Substitution G-A INTERGENIC Homo SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2551-S.SNP.10:266016 chr10:000266016 0 W/266016-266016 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.525047;DP=4499;DP4=2397,1910,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0724605;MQB=0.367897;MQSB=0;RPB=0.980673;SGB=47.3393;VDB=0.433446;EFF=INTRON(MODIFIER||||244|LOC_Os10g01440|protein_coding|CODING|LOC_Os10g01440.1|3|1) FN2197-S.SNP.10:267236 chr10:000267236 0 W/267236-267236 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.20747;DP=4386;DP4=2053,2007,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00227998;MQB=9.7183e-07;MQSB=0.989013;RPB=0.823841;SGB=-14.3297;VDB=0.238467;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.10:268031 chr10:000268031 0 W/268031-268031 FN2652-S SNP T -> A AC=2;AN=200;BQB=0.997982;DP=5617;DP4=3056,2281,33,30;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0316895;MQB=0.999391;MQSB=3.25418e-15;RPB=0.998116;SGB=216.923;VDB=0.826103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.10:272497 chr10:000272497 0 W/272497-272497 FN2667-S SNP G -> A AC=2;AN=200;BQB=0.806745;DP=4810;DP4=2198,2331,21,17;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00561331;MQB=0.00402094;MQSB=1.33663e-26;RPB=0.957499;SGB=126.794;VDB=0.969537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D944N|1005|LOC_Os10g01450|protein_coding|CODING|LOC_Os10g01450.1|3|1) FN3787-S.SNP.10:272954 chr10:000272954 0 W/272954-272954 FN3787-S SNP G -> A AC=2;AN=190;BQB=0.855855;DP=2929;DP4=1557,1244,18,16;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.76625e-08;MQSB=4.17882e-25;RPB=0.896427;SGB=149.281;VDB=0.886548;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.10:275579 chr10:000275579 0 W/275579-275579 FN2219-S SNP C -> T AC=1;AN=190;BQB=0.742275;DP=3405;DP4=1723,1281,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00499266;MQB=0.0681468;MQSB=0.00016965;RPB=0.557359;SGB=18.3316;VDB=0.657519;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.10:285422 chr10:000285422 0 W/285422-285422 FN4114-S SNP G -> A AC=2;AN=182;BQB=0.842349;DP=2331;DP4=1094,1138,10,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.21625e-11;MQSB=0.970469;RPB=0.898458;SGB=80.1982;VDB=0.408234;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V198|247|LOC_Os10g01470|protein_coding|CODING|LOC_Os10g01470.1|3|1) FN1586-S.SNP.10:294026 chr10:000294026 0 W/294026-294026 FN1586-S Single Base Substitution G-A INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN593-S.SNP.10:295333 chr10:000295333 0 W/295333-295333 FN593-S Single Base Substitution A-C INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2781-S.SNP.10:296661 chr10:000296661 0 W/296661-296661 FN2781-S SNP A -> T AC=1;AN=198;BQB=0.305386;DP=4185;DP4=1762,2027,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.36849e-08;MQSB=0.646015;RPB=0.0177863;SGB=9.3494;VDB=0.183541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.10:299975 chr10:000299975 0 W/299975-299975 FN-375 Single Base Substitution A-G INTERGENIC HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2251-S.SNP.10:305812 chr10:000305812 0 W/305812-305812 FN2251-S SNP A -> C AC=1;AN=190;BQB=0.918865;DP=4744;DP4=2260,2292,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53009e-06;MQSB=0.989653;RPB=0.899733;SGB=39.9877;VDB=0.929401;EFF=INTRON(MODIFIER||||354|LOC_Os10g01480|protein_coding|CODING|LOC_Os10g01480.1|1|1) FN-68.SNP.10:316036 chr10:000316036 0 W/316036-316036 FN-68 Single Base Substitution A-T INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2723-S.SNP.10:325354 chr10:000325354 0 W/325354-325354 FN2723-S SNP G -> A AC=1;AN=200;BQB=0.659346;DP=4419;DP4=2408,1735,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.96566e-10;MQSB=0.743479;RPB=0.5895;SGB=-12.5051;VDB=0.456832;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.10:327580 chr10:000327580 0 W/327580-327580 FN1422-S Single Base Substitution G-A INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1478-S.SNP.10:327999 chr10:000327999 0 W/327999-327999 FN1478-S Single Base Substitution C-T INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2329.SNP.10:328757 chr10:000328757 0 W/328757-328757 FN2329 SNP T -> G AC=1;AN=192;BQB=0.489592;DP=4450;DP4=2066,1977,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000224719;MQB=1.75914e-09;MQSB=0.0520386;RPB=0.535532;SGB=-103.238;VDB=0.874572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L150V|999|LOC_Os10g01510|protein_coding|CODING|LOC_Os10g01510.1|1|1) FN846-S.SNP.10:333003 chr10:000333003 0 W/333003-333003 FN846-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2542-S.SNP.10:338164 chr10:000338164 0 W/338164-338164 FN2542-S SNP T -> C AC=1;AN=186;BQB=0.944702;DP=3906;DP4=2026,1627,10,8;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.89256e-10;MQSB=0.956471;RPB=0.449;SGB=-13.2407;VDB=0.313211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.10:339069 chr10:000339069 0 W/339069-339069 FN1287-S Single Base Substitution C-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3791-S.SNP.10:347102 chr10:000347102 0 W/347102-347102 FN3791-S SNP C -> T AC=2;AN=190;BQB=0.923382;DP=2777;DP4=1378,1276,16,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.42058e-13;MQSB=0.965245;RPB=0.255689;SGB=49.1985;VDB=0.673813;EFF=INTRON(MODIFIER||||274|LOC_Os10g01530|protein_coding|CODING|LOC_Os10g01530.1|6|1) FN1740-S.SNP.10:351628 chr10:000351628 0 W/351628-351628 FN1740-S SNP T -> C AC=1;AN=188;BQB=0.0304405;DP=2948;DP4=2035,889,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69418e-05;MQSB=0.800987;RPB=0.177944;SGB=-15.5431;VDB=0.305467;EFF=INTRON(MODIFIER||||480|LOC_Os10g01540|protein_coding|CODING|LOC_Os10g01540.1|9|1),INTRON(MODIFIER||||441|LOC_Os10g01540|protein_coding|CODING|LOC_Os10g01540.2|9|1) FN1136-S.SNP.10:366112 chr10:000366112 0 W/366112-366112 FN1136-S Single Base Substitution C-A INTRON HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1566-S.SNP.10:366765 chr10:000366765 0 W/366765-366765 FN1566-S Single Base Substitution C-T UTR_5_PRIME Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN3373-S.SNP.10:383740 chr10:000383740 0 W/383740-383740 FN3373-S SNP T -> C AC=1;AN=184;BQB=0.926132;DP=2966;DP4=1502,1353,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46972e-08;MQSB=0.959557;RPB=0.653318;SGB=42.7914;VDB=0.637244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.10:385422 chr10:000385422 0 W/385422-385422 FN2608-S SNP C -> A AC=1;AN=198;BQB=0.217044;DP=3871;DP4=1909,1757,2,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000258331;MQB=0.000947057;MQSB=0.982603;RPB=0.985804;SGB=26.5745;VDB=0.856886;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.10:390456 chr10:000390456 0 W/390456-390456 FN2317 SNP T -> A AC=1;AN=192;BQB=0.562146;DP=5053;DP4=2283,2249,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000989511;MQB=5.93988e-14;MQSB=0.809435;RPB=0.988535;SGB=46.8644;VDB=0.380812;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.10:394135 chr10:000394135 0 W/394135-394135 FN2117-S SNP A -> T AC=1;AN=168;BQB=0.0580378;DP=3615;DP4=1655,1891,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0011065;MQB=0.00181828;MQSB=0.154547;RPB=0.933116;SGB=-16.665;VDB=0.939155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C1276S|1377|LOC_Os10g01600|protein_coding|CODING|LOC_Os10g01600.1|6|1) FN795-S.SNP.10:394621 chr10:000394621 0 W/394621-394621 FN795-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g01600 retrotransposon protein, putative, unclassified, expressed SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2705-S.SNP.10:401814 chr10:000401814 0 W/401814-401814 FN2705-S SNP A -> T AC=1;AN=200;BQB=0.839692;DP=5082;DP4=2527,2377,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.35657e-13;MQSB=0.933348;RPB=0.888436;SGB=61.9006;VDB=0.406539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.10:401890 chr10:000401890 0 W/401890-401890 FN3431-S SNP T -> C AC=1;AN=184;BQB=0.997409;DP=2563;DP4=1310,1202,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63039e-05;MQSB=0.984555;RPB=0.715724;SGB=18.1394;VDB=0.538025;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.10:413270 chr10:000413270 0 W/413270-413270 FN1735-S SNP G -> A AC=2;AN=188;BQB=0.779952;DP=3562;DP4=1755,1737,31,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.7663e-29;MQSB=0.998234;RPB=0.116142;SGB=84.2295;VDB=0.172806;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H227Y|1168|LOC_Os10g01610|protein_coding|CODING|LOC_Os10g01610.1|3|1) FN-199.SNP.10:425098 chr10:000425098 0 W/425098-425098 FN-199 Single Base Substitution C-T INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2558-S.SNP.10:425455 chr10:000425455 0 W/425455-425455 FN2558-S SNP G -> A AC=1;AN=198;BQB=0.973078;DP=4253;DP4=2143,1886,16,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.48554e-12;MQSB=0.541973;RPB=0.956621;SGB=-9.07482;VDB=0.339805;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.10:427551 chr10:000427551 0 W/427551-427551 FN-151 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g01640 decarboxylase, putative, expressed SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2739-S.SNP.10:429390 chr10:000429390 0 W/429390-429390 FN2739-S SNP A -> T AC=2;AN=200;BQB=0.997874;DP=4548;DP4=2251,2076,21,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.59235e-18;MQSB=0.890226;RPB=0.964224;SGB=108.768;VDB=0.938164;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K246N|467|LOC_Os10g01640|protein_coding|CODING|LOC_Os10g01640.1|4|1) FN3521-S.SNP.10:431390 chr10:000431390 0 W/431390-431390 FN3521-S SNP C -> G AC=1;AN=188;BQB=0.978894;DP=2670;DP4=1116,1467,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.19458e-06;MQSB=0.838107;RPB=0.87454;SGB=44.4357;VDB=0.786011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.10:459585 chr10:000459585 0 W/459585-459585 FN3790-S SNP C -> G AC=1;AN=190;BQB=0.837921;DP=2692;DP4=1460,1115,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000371471;MQB=4.75679e-10;MQSB=0.880373;RPB=0.943247;SGB=85.5263;VDB=0.842537;EFF=INTRON(MODIFIER||||247|LOC_Os10g01700|protein_coding|CODING|LOC_Os10g01700.1|1|1) FN489-S.SNP.10:461645 chr10:000461645 0 W/461645-461645 FN489-S Single Base Substitution G-A INTRON HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN4095-S.SNP.10:463654 chr10:000463654 0 W/463654-463654 FN4095-S SNP A -> G AC=2;AN=182;BQB=0.998582;DP=2430;DP4=1094,1208,11,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.87226e-12;MQSB=0.507566;RPB=0.999463;SGB=48.2527;VDB=0.469159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.10:466363 chr10:000466363 0 W/466363-466363 FN3331-S SNP G -> T AC=1;AN=184;BQB=0.990202;DP=2720;DP4=1277,1232,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.22426e-07;MQSB=0.958747;RPB=0.780052;SGB=15.7097;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.10:473256 chr10:000473256 0 W/473256-473256 FN714-S Single Base Substitution T-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN-195.SNP.10:476823 chr10:000476823 0 W/476823-476823 FN-195 Single Base Substitution A-G INTERGENIC HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1472-S.SNP.10:476949 chr10:000476949 0 W/476949-476949 FN1472-S Single Base Substitution T-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2580-S.SNP.10:478838 chr10:000478838 0 W/478838-478838 FN2580-S SNP A -> T AC=2;AN=198;BQB=0.95246;DP=4364;DP4=2400,1753,27,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=8.05676e-23;MQSB=0.73542;RPB=0.620793;SGB=94.2223;VDB=0.525946;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.10:478840 chr10:000478840 0 W/478840-478840 FN2580-S SNP A -> G AC=2;AN=198;BQB=0.896874;DP=4376;DP4=2418,1705,27,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.31393e-22;MQSB=0.750856;RPB=0.487676;SGB=140.812;VDB=0.559315;EFF=INTERGENIC(MODIFIER||||||||||1) FN919-S.SNP.10:482984 chr10:000482984 0 W/482984-482984 FN919-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN1237-S.SNP.10:486389 chr10:000486389 0 W/486389-486389 FN1237-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g01750 retrotransposon protein, putative, unclassified, expressed SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN-278.SNP.10:499474 chr10:000499474 0 W/499474-499474 FN-278 Single Base Substitution C-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3678-S.SNP.10:503114 chr10:000503114 0 W/503114-503114 FN3678-S SNP A -> C AC=1;AN=190;BQB=0.975159;DP=2792;DP4=1316,1366,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.33795e-05;MQSB=0.641973;RPB=0.94584;SGB=30.8803;VDB=0.382733;EFF=INTRON(MODIFIER||||1084|LOC_Os10g01770|protein_coding|CODING|LOC_Os10g01770.1|4|1) FN1551-S.SNP.10:513764 chr10:000513764 0 W/513764-513764 FN1551-S Single Base Substitution G-A INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN3416-S.SNP.10:525401 chr10:000525401 0 W/525401-525401 FN3416-S SNP T -> C AC=1;AN=184;BQB=0.950544;DP=2932;DP4=1357,1456,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.04354e-07;MQSB=0.464262;RPB=0.886605;SGB=53.3568;VDB=0.702466;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.10:527290 chr10:000527290 0 W/527290-527290 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.514086;DP=2589;DP4=1181,1316,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.91833e-09;MQSB=0.949848;RPB=0.989009;SGB=33.8752;VDB=0.299437;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q382*|394|LOC_Os10g01800|protein_coding|CODING|LOC_Os10g01800.1|1|1) FN876-S.SNP.10:532601 chr10:000532601 0 W/532601-532601 FN876-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN876-S.SNP.10:532606 chr10:000532606 0 W/532606-532606 FN876-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1739-S.SNP.10:534980 chr10:000534980 0 W/534980-534980 FN1739-S SNP G -> A AC=1;AN=188;BQB=0.613956;DP=3526;DP4=1440,2049,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04112e-08;MQSB=0.587325;RPB=0.747843;SGB=-12.8266;VDB=0.931927;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.10:538124 chr10:000538124 0 W/538124-538124 FN727-S Single Base Substitution T-A INTERGENIC HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN1121-S.SNP.10:541882 chr10:000541882 0 W/541882-541882 FN1121-S Single Base Substitution C-T INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.10:541884 chr10:000541884 0 W/541884-541884 FN1121-S Single Base Substitution G-T INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2404.SNP.10:542430 chr10:000542430 0 W/542430-542430 FN2404 SNP C -> T AC=2;AN=200;BQB=0.98069;DP=4578;DP4=2296,1851,37,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.00413e-29;MQSB=0.99169;RPB=0.749338;SGB=202.502;VDB=0.469125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T110I|176|LOC_Os10g01840|protein_coding|CODING|LOC_Os10g01840.1|3|1) FN3779-S.SNP.10:545318 chr10:000545318 0 W/545318-545318 FN3779-S SNP T -> A AC=1;AN=190;BQB=0.684095;DP=2575;DP4=1217,1280,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.78642e-09;MQSB=0.884922;RPB=0.0980833;SGB=26.2136;VDB=0.238482;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.10:546372 chr10:000546372 0 W/546372-546372 FN1104-S Single Base Substitution C-T INTRON HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2129-S.SNP.10:547227 chr10:000547227 0 W/547227-547227 FN2129-S SNP G -> A AC=2;AN=168;BQB=0.85785;DP=3110;DP4=1960,1077,37,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.63799e-26;MQSB=0.998809;RPB=0.989595;SGB=41.5622;VDB=0.480123;EFF=INTRON(MODIFIER||||66|LOC_Os10g01844|protein_coding|CODING|LOC_Os10g01844.1|2|1) FN2683-S.SNP.10:557289 chr10:000557289 0 W/557289-557289 FN2683-S SNP C -> A AC=2;AN=200;BQB=0.819351;DP=5108;DP4=2479,2411,27,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000195771;MQB=6.94809e-29;MQSB=0.710569;RPB=0.81742;SGB=123.271;VDB=0.600569;EFF=SPLICE_SITE_REGION(LOW||||1048|LOC_Os10g01850|protein_coding|CODING|LOC_Os10g01850.1|1|1),INTRON(MODIFIER||||1048|LOC_Os10g01850|protein_coding|CODING|LOC_Os10g01850.1|1|1) FN2234-S.SNP.10:559262 chr10:000559262 0 W/559262-559262 FN2234-S SNP A -> T AC=2;AN=188;BQB=0.295069;DP=4516;DP4=2224,1886,9,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.28356e-12;MQSB=0.699739;RPB=0.247407;SGB=38.983;VDB=0.877211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.10:566368 chr10:000566368 0 W/566368-566368 FN1446-S Single Base Substitution C-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2451.SNP.10:567373 chr10:000567373 0 W/567373-567373 FN2451 SNP G -> T AC=1;AN=200;BQB=0.838415;DP=6463;DP4=3926,2159,10,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00504535;MQSB=0;RPB=0.535572;SGB=37.3004;VDB=0.266376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1026-S.SNP.10:567693 chr10:000567693 0 W/567693-567693 FN1026-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g01880 retrotransposon protein, putative, unclassified, expressed SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN788-S.SNP.10:582253 chr10:000582253 0 W/582253-582253 FN788-S Single Base Substitution T-C INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN576-S.SNP.10:586034 chr10:000586034 0 W/586034-586034 FN576-S Single Base Substitution C-A INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3345-S.SNP.10:590952 chr10:000590952 0 W/590952-590952 FN3345-S SNP T -> C AC=1;AN=184;BQB=0.930063;DP=2794;DP4=1301,1331,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25292e-09;MQSB=0.981451;RPB=0.796922;SGB=28.3187;VDB=0.0577483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.10:599012 chr10:000599012 0 W/599012-599012 FN2589-S SNP T -> G AC=2;AN=198;BQB=0.0648357;DP=4114;DP4=1914,1910,10,14;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.88034e-13;MQSB=0.924654;RPB=0.698961;SGB=104.69;VDB=0.703527;EFF=INTRON(MODIFIER||||962|LOC_Os10g01950|protein_coding|CODING|LOC_Os10g01950.1|3|1) FN3280-S.SNP.10:603218 chr10:000603218 0 W/603218-603218 FN3280-S SNP C -> T AC=1;AN=184;BQB=0.803777;DP=2692;DP4=1231,1383,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.70894e-11;MQSB=0.859246;RPB=0.775012;SGB=49.835;VDB=0.175685;EFF=INTRON(MODIFIER||||657|LOC_Os10g01960|protein_coding|CODING|LOC_Os10g01960.1|2|1) FN2487.SNP.10:605510 chr10:000605510 0 W/605510-605510 FN2487 SNP C -> T AC=1;AN=200;BQB=0.878662;DP=4995;DP4=2449,2209,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5517e-14;MQSB=0.783851;RPB=0.870523;SGB=-7.6637;VDB=0.495598;EFF=INTERGENIC(MODIFIER||||||||||1) FN1626-S.SNP.10:606401 chr10:000606401 0 W/606401-606401 FN1626-S SNP G -> A AC=1;AN=188;BQB=0.910534;DP=2499;DP4=953,1490,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.22277e-09;MQSB=0.989472;RPB=0.380154;SGB=13.2547;VDB=0.432984;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.10:607856 chr10:000607856 0 W/607856-607856 FN1180-S Single Base Substitution A-G INTRON HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3057-S.SNP.10:607932 chr10:000607932 0 W/607932-607932 FN3057-S SNP G -> T AC=1;AN=184;BQB=0.970739;DP=3967;DP4=2096,1750,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.13862e-11;MQSB=0.923391;RPB=0.873779;SGB=80.3949;VDB=0.302233;EFF=INTRON(MODIFIER||||475|LOC_Os10g01970|protein_coding|CODING|LOC_Os10g01970.1|2|1) FN3453-S.SNP.10:608313 chr10:000608313 0 W/608313-608313 FN3453-S SNP C -> T AC=1;AN=184;BQB=0.819288;DP=3764;DP4=1771,1897,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01071e-05;MQSB=0.97366;RPB=0.172217;SGB=48.7425;VDB=0.519344;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A157T|475|LOC_Os10g01970|protein_coding|CODING|LOC_Os10g01970.1|2|1) FN2487.SNP.10:610342 chr10:000610342 0 W/610342-610342 FN2487 SNP C -> T AC=1;AN=200;BQB=0.380857;DP=4882;DP4=2408,2183,12,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70444e-17;MQSB=0.847404;RPB=0.940589;SGB=73.7728;VDB=0.495679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.10:610475 chr10:000610475 0 W/610475-610475 FN1455-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2629-S.SNP.10:614036 chr10:000614036 0 W/614036-614036 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.549487;DP=5115;DP4=2392,2510,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78346e-17;MQSB=0.57036;RPB=0.730135;SGB=118.737;VDB=0.964443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.10:614129 chr10:000614129 0 W/614129-614129 FN3105-S SNP A -> G AC=2;AN=184;BQB=0.968922;DP=3193;DP4=1718,1346,17,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30235e-17;MQSB=0.987054;RPB=0.954317;SGB=130.135;VDB=0.725664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.10:615646 chr10:000615646 0 W/615646-615646 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.873539;DP=3662;DP4=1530,1962,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.97888e-09;MQSB=0.0757981;RPB=0.384158;SGB=54.5295;VDB=0.774938;EFF=INTRON(MODIFIER||||1951|LOC_Os10g01984|protein_coding|CODING|LOC_Os10g01984.1|13|1) FN1128-S.SNP.10:619878 chr10:000619878 0 W/619878-619878 FN1128-S Single Base Substitution T-G INTRON HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN3651-S.SNP.10:624791 chr10:000624791 0 W/624791-624791 FN3651-S SNP C -> T AC=1;AN=190;BQB=0.820958;DP=1651;DP4=724,843,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.10894e-06;MQSB=0.998408;RPB=0.108668;SGB=44.5415;VDB=0.304945;EFF=INTRON(MODIFIER||||1951|LOC_Os10g01984|protein_coding|CODING|LOC_Os10g01984.1|3|1) FN2390.SNP.10:627549 chr10:000627549 0 W/627549-627549 FN2390 SNP C -> T AC=1;AN=200;BQB=0.778536;DP=4497;DP4=2094,2125,7,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0169002;MQB=3.3468e-06;MQSB=0.996886;RPB=0.6307;SGB=4.67442;VDB=0.861952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E548K|1951|LOC_Os10g01984|protein_coding|CODING|LOC_Os10g01984.1|3|1) FN1430-S.SNP.10:630628 chr10:000630628 0 W/630628-630628 FN1430-S Single Base Substitution C-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3490-S.SNP.10:633868 chr10:000633868 0 W/633868-633868 FN3490-S SNP T -> A AC=1;AN=184;BQB=0.952476;DP=2681;DP4=1134,1408,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.3968e-09;MQSB=0.97194;RPB=0.846803;SGB=71.3514;VDB=0.627799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.10:634025 chr10:000634025 0 W/634025-634025 FN2117-S SNP A -> G AC=1;AN=168;BQB=0.203418;DP=3428;DP4=1572,1822,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.10561e-07;MQSB=0.999642;RPB=0.984966;SGB=-15.8033;VDB=0.780961;EFF=INTERGENIC(MODIFIER||||||||||1) FN1600-S.SNP.10:637239 chr10:000637239 0 W/637239-637239 FN1600-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g02010 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2589-S.SNP.10:639834 chr10:000639834 0 W/639834-639834 FN2589-S SNP A -> T AC=1;AN=198;BQB=0.920043;DP=4578;DP4=2065,2360,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00742682;MQB=0.00750909;MQSB=9.3235e-12;RPB=0.98023;SGB=26.5745;VDB=0.084975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.10:643067 chr10:000643067 0 W/643067-643067 FN3693-S SNP A -> G AC=1;AN=190;BQB=0.979936;DP=2606;DP4=1267,1232,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.1221e-10;MQSB=0.857341;RPB=0.987446;SGB=50.3161;VDB=0.944084;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.10:643766 chr10:000643766 0 W/643766-643766 FN4109-S SNP C -> T AC=1;AN=182;BQB=0.945016;DP=3178;DP4=1556,1529,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.10577e-09;MQSB=0.956222;RPB=0.985243;SGB=6.66046;VDB=0.645118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-411.SNP.10:644180 chr10:000644180 0 W/644180-644180 FN-411 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g02020 expressed protein SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2781-S.SNP.10:647647 chr10:000647647 0 W/647647-647647 FN2781-S SNP G -> C AC=1;AN=198;BQB=0.143352;DP=3779;DP4=1749,1829,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0121725;MQB=0.000745672;MQSB=0.0170389;RPB=0.761121;SGB=72.5245;VDB=0.717968;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P313R|817|LOC_Os10g02030|protein_coding|CODING|LOC_Os10g02030.1|4|1) FN2665-S.SNP.10:659107 chr10:000659107 0 W/659107-659107 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.744797;DP=4857;DP4=2451,2148,10,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.98922e-08;MQSB=0.957912;RPB=0.7505;SGB=34.6953;VDB=0.082243;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.10:660884 chr10:000660884 0 W/660884-660884 FN1231-S Single Base Substitution A-G INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN437-S.SNP.10:660970 chr10:000660970 0 W/660970-660970 FN437-S Single Base Substitution A-G INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN3802-S.SNP.10:663157 chr10:000663157 0 W/663157-663157 FN3802-S SNP C -> A AC=1;AN=190;BQB=0.976923;DP=2460;DP4=1328,984,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0211382;MQB=0.0395613;MQSB=0.341769;RPB=0.726498;SGB=43.2083;VDB=0.196258;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.10:665950 chr10:000665950 0 W/665950-665950 FN3477-S SNP C -> T AC=1;AN=184;BQB=0.935329;DP=2704;DP4=1272,1303,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.57052e-08;MQSB=0.991962;RPB=0.584993;SGB=39.2697;VDB=0.62814;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.10:669243 chr10:000669243 0 W/669243-669243 FN3798-S SNP G -> A AC=1;AN=190;BQB=0.555877;DP=2195;DP4=1180,956,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00197018;MQSB=0.988045;RPB=0.516329;SGB=18.3316;VDB=0.62634;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.10:670843 chr10:000670843 0 W/670843-670843 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.722869;DP=5041;DP4=2708,2125,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01216e-08;MQSB=0.968597;RPB=0.582928;SGB=29.4849;VDB=0.744433;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.10:672882 chr10:000672882 0 W/672882-672882 FN939-S Single Base Substitution T-A INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN1363-S.SNP.10:680632 chr10:000680632 0 W/680632-680632 FN1363-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g02080 PTR-like peptide transporter, putatuve, expressed SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN622-S.SNP.10:682243 chr10:000682243 0 W/682243-682243 FN622-S Single Base Substitution C-T INTRON HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3424-S.SNP.10:690751 chr10:000690751 0 W/690751-690751 FN3424-S SNP T -> G AC=2;AN=184;BQB=0.79079;DP=2821;DP4=1363,1352,15,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.75601e-14;MQSB=0.969901;RPB=0.250401;SGB=-7.93076;VDB=0.157047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K254Q|574|LOC_Os10g02100|protein_coding|CODING|LOC_Os10g02100.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K249Q|569|LOC_Os10g02100|protein_coding|CODING|LOC_Os10g02100.2|4|1) FN3424-S.SNP.10:690752 chr10:000690752 0 W/690752-690752 FN3424-S SNP C -> T AC=2;AN=184;BQB=0.514744;DP=2822;DP4=1393,1355,11,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.85662e-15;MQSB=0.963105;RPB=0.278325;SGB=81.5311;VDB=0.328795;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q253|574|LOC_Os10g02100|protein_coding|CODING|LOC_Os10g02100.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q248|569|LOC_Os10g02100|protein_coding|CODING|LOC_Os10g02100.2|4|1) FN-156.SNP.10:692199 chr10:000692199 0 W/692199-692199 FN-156 Single Base Substitution A-C INTRON HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3388-S.SNP.10:695817 chr10:000695817 0 W/695817-695817 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.762528;DP=2618;DP4=1175,1361,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.96821e-08;MQSB=0.96476;RPB=0.479167;SGB=39.2697;VDB=0.891624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.10:700453 chr10:000700453 0 W/700453-700453 FN1240-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g02120 retrotransposon protein, putative, unclassified, expressed SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1689-S.SNP.10:700692 chr10:000700692 0 W/700692-700692 FN1689-S SNP C -> T AC=1;AN=188;BQB=0.295184;DP=3458;DP4=1433,1991,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00115674;MQB=1.34471e-06;MQSB=1.56117e-05;RPB=0.432051;SGB=-88.8972;VDB=0.0694036;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1076R|1522|LOC_Os10g02120|protein_coding|CODING|LOC_Os10g02120.1|5|1) FN2703-S.SNP.10:701899 chr10:000701899 0 W/701899-701899 FN2703-S SNP G -> T AC=1;AN=200;BQB=0.55124;DP=5046;DP4=2549,2229,18,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00237812;MQB=4.33339e-14;MQSB=0.917098;RPB=0.96898;SGB=105.163;VDB=0.718537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D765E|1522|LOC_Os10g02120|protein_coding|CODING|LOC_Os10g02120.1|4|1) FN2107-S.SNP.10:704034 chr10:000704034 0 W/704034-704034 FN2107-S SNP C -> A AC=1;AN=168;BQB=0.0131073;DP=4004;DP4=1752,2159,8,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0127373;MQB=1.08903e-05;MQSB=0.0618108;RPB=0.357289;SGB=-80.0779;VDB=0.427959;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A283S|1522|LOC_Os10g02120|protein_coding|CODING|LOC_Os10g02120.1|2|1) FN1728-S.SNP.10:705045 chr10:000705045 0 W/705045-705045 FN1728-S SNP C -> T AC=1;AN=188;BQB=0.740678;DP=3027;DP4=937,2049,6,20;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.033036;MQB=0.120129;MQSB=1.70848e-13;RPB=0.748578;SGB=112.585;VDB=0.176116;EFF=INTRON(MODIFIER||||1522|LOC_Os10g02120|protein_coding|CODING|LOC_Os10g02120.1|1|1) FN-69.SNP.10:711496 chr10:000711496 0 W/711496-711496 FN-69 Single Base Substitution A-G INTERGENIC HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2611-S.SNP.10:712057 chr10:000712057 0 W/712057-712057 FN2611-S SNP T -> A AC=1;AN=200;BQB=0.849263;DP=5004;DP4=2223,2495,29,28;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.10899e-29;MQSB=0.943062;RPB=0.853952;SGB=72.0916;VDB=0.628046;EFF=INTERGENIC(MODIFIER||||||||||1) FN-28.SNP.10:713871 chr10:000713871 0 W/713871-713871 FN-28 Single Base Substitution G-A INTERGENIC Homo SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN-258.SNP.10:723145 chr10:000723145 0 W/723145-723145 FN-258 Single Base Substitution T-A INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN814-S.SNP.10:723175 chr10:000723175 0 W/723175-723175 FN814-S Single Base Substitution C-T INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN4173-S.SNP.10:733356 chr10:000733356 0 W/733356-733356 FN4173-S SNP C -> T AC=1;AN=170;BQB=0.958646;DP=2277;DP4=1073,1137,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000238828;MQSB=0.957258;RPB=0.999989;SGB=30.1021;VDB=0.853153;EFF=INTRON(MODIFIER||||688|LOC_Os10g02150|protein_coding|CODING|LOC_Os10g02150.1|1|1) FN3360-S.SNP.10:744777 chr10:000744777 0 W/744777-744777 FN3360-S SNP G -> A AC=2;AN=184;BQB=0.998025;DP=3320;DP4=1464,1702,23,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.19564e-23;MQSB=0.970176;RPB=0.884823;SGB=184.396;VDB=0.566592;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.10:750397 chr10:000750397 0 W/750397-750397 FN1340-S Single Base Substitution G-T INTRON HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN2361.SNP.10:753079 chr10:000753079 0 W/753079-753079 FN2361 SNP T -> A AC=1;AN=190;BQB=0.925696;DP=4488;DP4=2052,1827,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0129234;MQB=0.998616;MQSB=0.000886478;RPB=0.775808;SGB=21.4339;VDB=0.00173029;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.10:753204 chr10:000753204 0 W/753204-753204 FN1421-S Single Base Substitution T-A INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1136-S.SNP.10:753732 chr10:000753732 0 W/753732-753732 FN1136-S Single Base Substitution A-C INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN3105-S.SNP.10:754040 chr10:000754040 0 W/754040-754040 FN3105-S SNP A -> G AC=2;AN=184;BQB=0.997265;DP=3206;DP4=1568,1544,8,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.99607e-15;MQSB=0.632461;RPB=0.896277;SGB=81.5311;VDB=0.749334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.10:754051 chr10:000754051 0 W/754051-754051 FN3105-S SNP A -> G AC=2;AN=184;BQB=0.984591;DP=3191;DP4=1593,1462,7,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.235e-15;MQSB=0.745174;RPB=0.958728;SGB=103.004;VDB=0.39935;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.10:754653 chr10:000754653 0 W/754653-754653 FN-184 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN777-S.SNP.10:756604 chr10:000756604 0 W/756604-756604 FN777-S Single Base Substitution C-A INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN1162-S.SNP.10:758659 chr10:000758659 0 W/758659-758659 FN1162-S Single Base Substitution A-T INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN2121-S.SNP.10:761606 chr10:000761606 0 W/761606-761606 FN2121-S SNP G -> T AC=1;AN=168;BQB=0.734316;DP=3793;DP4=1956,1804,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22195e-12;MQSB=0.990628;RPB=0.98791;SGB=-40.6433;VDB=0.0471514;EFF=INTRON(MODIFIER||||579|LOC_Os10g02210|protein_coding|CODING|LOC_Os10g02210.1|5|1) FN1696-S.SNP.10:769901 chr10:000769901 0 W/769901-769901 FN1696-S SNP T -> C AC=1;AN=188;BQB=0.067339;DP=4132;DP4=1683,2409,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0137948;MQB=0.0276844;MQSB=5.77785e-15;RPB=0.658132;SGB=0.908326;VDB=0.497166;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.10:770230 chr10:000770230 0 W/770230-770230 W423-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2529-S.SNP.10:780930 chr10:000780930 0 W/780930-780930 FN2529-S SNP A -> T AC=1;AN=198;BQB=0.993345;DP=4034;DP4=1846,1907,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04228e-10;MQSB=0.0662108;RPB=0.93455;SGB=54.5295;VDB=0.296913;EFF=INTERGENIC(MODIFIER||||||||||1) FN3593-S.SNP.10:788588 chr10:000788588 0 W/788588-788588 FN3593-S SNP C -> G AC=2;AN=190;BQB=0.994255;DP=2580;DP4=1362,1118,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.32866e-14;MQSB=0.555007;RPB=0.732027;SGB=112.85;VDB=0.148768;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggC|G426|580|LOC_Os10g02240|protein_coding|CODING|LOC_Os10g02240.1|5|1) FN3695-S.SNP.10:788730 chr10:000788730 0 W/788730-788730 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.999989;DP=2174;DP4=1181,901,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.09779e-05;MQSB=0.954496;RPB=0.338854;SGB=39.9877;VDB=0.600763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A379V|580|LOC_Os10g02240|protein_coding|CODING|LOC_Os10g02240.1|5|1) FN3567-S.SNP.10:789324 chr10:000789324 0 W/789324-789324 FN3567-S SNP G -> A AC=1;AN=188;BQB=0.998217;DP=2836;DP4=1566,1112,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.13408e-10;MQSB=1.45986e-05;RPB=0.937358;SGB=64.3306;VDB=0.510653;EFF=INTRON(MODIFIER||||580|LOC_Os10g02240|protein_coding|CODING|LOC_Os10g02240.1|4|1) FN1537-S.SNP.10:797022 chr10:000797022 0 W/797022-797022 FN1537-S Single Base Substitution G-A INTRON HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3373-S.SNP.10:803716 chr10:000803716 0 W/803716-803716 FN3373-S SNP A -> G AC=1;AN=184;BQB=0.698693;DP=2782;DP4=1300,1354,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.19426e-05;MQSB=0.990538;RPB=0.937766;SGB=21.6609;VDB=0.977194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.10:805735 chr10:000805735 0 W/805735-805735 FN2791-S SNP A -> G AC=2;AN=198;BQB=0.466156;DP=3948;DP4=1694,1766,12,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.96575e-15;MQSB=0.754625;RPB=0.840338;SGB=104.861;VDB=0.768823;EFF=UTR_3_PRIME(MODIFIER||429||576|LOC_Os10g02260|protein_coding|CODING|LOC_Os10g02260.1|5|1),UTR_3_PRIME(MODIFIER||584||491|LOC_Os10g02260|protein_coding|CODING|LOC_Os10g02260.2|5|1) FN4020-S.SNP.10:811150 chr10:000811150 0 W/811150-811150 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.997738;DP=2783;DP4=1233,1426,11,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.4944e-18;MQSB=0.988107;RPB=0.40921;SGB=136.358;VDB=0.0938475;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.10:824779 chr10:000824779 0 W/824779-824779 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.98158;DP=2286;DP4=1391,763,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.89996e-08;MQSB=0.00029881;RPB=0.882587;SGB=46.7622;VDB=0.461207;EFF=UTR_3_PRIME(MODIFIER||204||186|LOC_Os10g02300|protein_coding|CODING|LOC_Os10g02300.3|5|1),UTR_3_PRIME(MODIFIER||204||186|LOC_Os10g02300|protein_coding|CODING|LOC_Os10g02300.2|5|1) FN3815-S.SNP.10:830542 chr10:000830542 0 W/830542-830542 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.980289;DP=2896;DP4=1286,1534,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.20741e-08;MQSB=0.91853;RPB=0.257121;SGB=32.5467;VDB=0.681875;EFF=INTRON(MODIFIER||||238|LOC_Os10g02314|protein_coding|CODING|LOC_Os10g02314.1|3|1) FN2438.SNP.10:832888 chr10:000832888 0 W/832888-832888 FN2438 SNP C -> T AC=2;AN=200;BQB=0.251734;DP=3922;DP4=1768,1895,16,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.77539e-18;MQSB=0.996942;RPB=0.994288;SGB=119.583;VDB=0.803692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.10:833076 chr10:000833076 0 W/833076-833076 FN1053-S Single Base Substitution A-T INTERGENIC HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2128-S.SNP.10:846232 chr10:000846232 0 W/846232-846232 FN2128-S SNP G -> T AC=1;AN=168;BQB=0.870422;DP=2097;DP4=999,1052,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.27135e-09;MQSB=0.99422;RPB=0.801873;SGB=51.902;VDB=0.32022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.10:855924 chr10:000855924 0 W/855924-855924 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.945108;DP=1671;DP4=544,1061,1,11;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000598444;MQB=4.69735e-05;MQSB=1.80145e-05;RPB=0.399837;SGB=48.979;VDB=0.501881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.10:866118 chr10:000866118 0 W/866118-866118 FN3777-S SNP A -> T AC=2;AN=190;BQB=0.23264;DP=2951;DP4=1246,1593,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.04842e-13;MQSB=0.999996;RPB=0.918221;SGB=28.9731;VDB=0.51268;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.10:867568 chr10:000867568 0 W/867568-867568 FN2582-S SNP A -> C AC=1;AN=198;BQB=0.937545;DP=4768;DP4=2246,2280,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.6758e-13;MQSB=0.83761;RPB=0.993076;SGB=90.9049;VDB=0.0203436;EFF=INTRON(MODIFIER||||320|LOC_Os10g02380|protein_coding|CODING|LOC_Os10g02380.1|1|1) FN3631-S.SNP.10:871523 chr10:000871523 0 W/871523-871523 FN3631-S SNP C -> T AC=1;AN=190;BQB=0.736938;DP=2818;DP4=1375,1337,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00141945;MQB=0.0020195;MQSB=0.526134;RPB=0.934734;SGB=35.4339;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.10:871982 chr10:000871982 0 W/871982-871982 FN2578-S SNP C -> T AC=1;AN=198;BQB=0.991048;DP=4113;DP4=1884,2010,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243132;MQB=2.7802e-09;MQSB=0.76201;RPB=0.725885;SGB=72.5245;VDB=0.541148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.10:872022 chr10:000872022 0 W/872022-872022 FN2446 SNP T -> A AC=1;AN=200;BQB=0.966546;DP=4379;DP4=2001,2098,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48603e-06;MQSB=0.998599;RPB=0.937089;SGB=33.0593;VDB=0.307152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.10:878262 chr10:000878262 0 W/878262-878262 FN3790-S SNP T -> A AC=1;AN=190;BQB=0.938244;DP=2712;DP4=1229,1405,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.69732e-06;MQSB=0.937784;RPB=0.705444;SGB=44.5415;VDB=0.862874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.10:880939 chr10:000880939 0 W/880939-880939 FN2194-S SNP A -> C AC=1;AN=190;BQB=0.240737;DP=4609;DP4=2221,1909,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000433934;MQB=1.35741e-08;MQSB=0.322626;RPB=0.698108;SGB=10.3266;VDB=0.465123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.10:880941 chr10:000880941 0 W/880941-880941 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.166305;DP=4632;DP4=2263,2061,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000431779;MQB=9.51215e-08;MQSB=0.109713;RPB=0.980571;SGB=46.7622;VDB=0.0758269;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.10:885218 chr10:000885218 0 W/885218-885218 FN4116-S SNP A -> T AC=1;AN=182;BQB=0.986914;DP=3052;DP4=1470,1456,12,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.3933e-15;MQSB=0.930054;RPB=0.290239;SGB=102.753;VDB=0.620175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T202S|632|LOC_Os10g02420|protein_coding|CODING|LOC_Os10g02420.1|2|1) FN673-S.SNP.10:885369 chr10:000885369 0 W/885369-885369 FN673-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g02420 retrotransposon protein, putative, unclassified, expressed SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1541-S.SNP.10:885719 chr10:000885719 0 W/885719-885719 FN1541-S Single Base Substitution C-T INTRON HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN956-S.SNP.10:887198 chr10:000887198 0 W/887198-887198 FN956-S Single Base Substitution C-T INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3535-S.SNP.10:888731 chr10:000888731 0 W/888731-888731 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.697107;DP=3061;DP4=1557,1416,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00196014;MQB=9.98885e-09;MQSB=0.584169;RPB=0.662373;SGB=-81.5271;VDB=0.984265;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A295|534|LOC_Os10g02430|protein_coding|CODING|LOC_Os10g02430.1|3|1) FN418-S.SNP.10:891275 chr10:000891275 0 W/891275-891275 FN418-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g02440 retrotransposon protein, putative, unclassified, expressed SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN3501-S.SNP.10:893596 chr10:000893596 0 W/893596-893596 FN3501-S SNP C -> T AC=1;AN=188;BQB=0.940029;DP=2787;DP4=1488,1182,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000358809;MQB=0.000367788;MQSB=0.859956;RPB=0.958794;SGB=5.73019;VDB=0.931306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.10:898059 chr10:000898059 0 W/898059-898059 FN2198-S SNP G -> T AC=1;AN=190;BQB=0.59537;DP=5244;DP4=2582,2325,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0596873;MQB=0.585909;MQSB=8.99296e-07;RPB=0.781008;SGB=25.439;VDB=0.780718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.10:898643 chr10:000898643 0 W/898643-898643 FN2626-S SNP A -> G AC=1;AN=200;BQB=0.422026;DP=5187;DP4=2523,2454,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14131e-07;MQSB=0.490635;RPB=0.849484;SGB=16.4591;VDB=0.18368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.10:909832 chr10:000909832 0 W/909832-909832 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.719056;DP=2730;DP4=1125,1492,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05207e-08;MQSB=0.998603;RPB=0.997019;SGB=71.8647;VDB=0.815896;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.10:917972 chr10:000917972 0 W/917972-917972 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1423-S.SNP.10:917973 chr10:000917973 0 W/917973-917973 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2709-S.SNP.10:920617 chr10:000920617 0 W/920617-920617 FN2709-S SNP C -> G AC=1;AN=200;BQB=0.738004;DP=4980;DP4=2199,2468,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25143e-06;MQSB=0.616185;RPB=0.999187;SGB=13.8539;VDB=0.658291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.10:928181 chr10:000928181 0 W/928181-928181 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.995067;DP=3460;DP4=1736,1400,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000289017;MQB=0.00168553;MQSB=0.87688;RPB=0.895196;SGB=26.5745;VDB=0.841706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D614Y|1110|LOC_Os10g02500|protein_coding|CODING|LOC_Os10g02500.1|1|1) FN3416-S.SNP.10:930704 chr10:000930704 0 W/930704-930704 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.525975;DP=2831;DP4=1304,1188,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79026e-05;MQSB=0.191117;RPB=0.598509;SGB=-15.2358;VDB=0.202281;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.10:936539 chr10:000936539 0 W/936539-936539 FN1356-S Single Base Substitution T-C INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN589-S.SNP.10:944452 chr10:000944452 0 W/944452-944452 FN589-S Single Base Substitution T-C INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-92.SNP.10:944982 chr10:000944982 0 W/944982-944982 FN-92 Single Base Substitution T-C INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN4132-S.SNP.10:948187 chr10:000948187 0 W/948187-948187 FN4132-S SNP C -> G AC=1;AN=182;BQB=0.955895;DP=3287;DP4=1710,1494,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.00152e-06;MQSB=0.881226;RPB=0.278914;SGB=39.6007;VDB=0.165106;EFF=INTRON(MODIFIER||||768|LOC_Os10g02520|protein_coding|CODING|LOC_Os10g02520.1|5|1) FN4132-S.SNP.10:948902 chr10:000948902 0 W/948902-948902 FN4132-S SNP A -> T AC=1;AN=182;BQB=0.62994;DP=3337;DP4=1494,1736,8,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.94463e-11;MQSB=0.962415;RPB=0.051778;SGB=43.231;VDB=0.273281;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T561|768|LOC_Os10g02520|protein_coding|CODING|LOC_Os10g02520.1|5|1) FN1682-S.SNP.10:949666 chr10:000949666 0 W/949666-949666 FN1682-S SNP T -> G AC=2;AN=188;BQB=0.241791;DP=3184;DP4=1473,1644,30,25;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=3.46705e-28;MQSB=0.85188;RPB=0.242488;SGB=46.8642;VDB=0.15174;EFF=INTRON(MODIFIER||||768|LOC_Os10g02520|protein_coding|CODING|LOC_Os10g02520.1|3|1) FN_772-3-1.SNP.10:959577 chr10:000959577 0 W/959577-959577 FN_772-3-1 Single Base Substitution C-T HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN4240-S.SNP.10:962236 chr10:000962236 0 W/962236-962236 FN4240-S SNP G -> T AC=1;AN=170;BQB=0.986839;DP=2525;DP4=1302,1151,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.42039e-06;MQSB=0.895422;RPB=0.62339;SGB=34.5445;VDB=0.877587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G500V|1580|LOC_Os10g02544|protein_coding|CODING|LOC_Os10g02544.1|4|1) FN1572-S.SNP.10:965356 chr10:000965356 0 W/965356-965356 FN1572-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1625-S.SNP.10:972685 chr10:000972685 0 W/972685-972685 FN1625-S Single Base Substitution A-G INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.10:972685 chr10:000972685 0 W/972685-972685 FN1626-S SNP A -> G AC=1;AN=188;BQB=0.720235;DP=3890;DP4=1853,1993,9,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.92573e-09;MQSB=0.997797;RPB=0.850542;SGB=20.9711;VDB=0.720737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.10:973036 chr10:000973036 0 W/973036-973036 FN2377 SNP T -> C AC=2;AN=192;BQB=0.714761;DP=4868;DP4=2315,2248,27,39;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000410846;MQB=9.47631e-35;MQSB=0.93322;RPB=0.993056;SGB=225.126;VDB=0.98771;EFF=INTERGENIC(MODIFIER||||||||||1) FN1062-S.SNP.10:975169 chr10:000975169 0 W/975169-975169 FN1062-S Single Base Substitution A-T INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN704-S.SNP.10:982596 chr10:000982596 0 W/982596-982596 FN704-S Single Base Substitution A-G INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN707-S.SNP.10:982981 chr10:000982981 0 W/982981-982981 FN707-S Single Base Substitution C-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2266-S.SNP.10:990174 chr10:000990174 0 W/990174-990174 FN2266-S SNP C -> T AC=2;AN=190;BQB=0.649209;DP=5388;DP4=2769,2347,17,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.62771e-20;MQSB=0.716581;RPB=0.999697;SGB=124.947;VDB=0.44859;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.10:993871 chr10:000993871 0 W/993871-993871 FN477-S Single Base Substitution C-T INTRON HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN560-S.SNP.10:996071 chr10:000996071 0 W/996071-996071 FN560-S Single Base Substitution G-C INTERGENIC HOMO SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2434.SNP.10:1008677 chr10:001008677 0 W/1008677-1008677 FN2434 SNP T -> A AC=1;AN=200;BQB=0.257851;DP=4310;DP4=2068,1973,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.79151e-06;MQSB=0.873681;RPB=0.296195;SGB=35.8441;VDB=0.143164;EFF=INTRON(MODIFIER||||463|LOC_Os10g02630|protein_coding|CODING|LOC_Os10g02630.1|9|1) FN2434.SNP.10:1008678 chr10:001008678 0 W/1008678-1008678 FN2434 SNP G -> T AC=1;AN=200;BQB=0.979026;DP=4314;DP4=2073,1954,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79832e-07;MQSB=0.981702;RPB=0.685757;SGB=19.0642;VDB=0.0664823;EFF=INTRON(MODIFIER||||463|LOC_Os10g02630|protein_coding|CODING|LOC_Os10g02630.1|9|1) FN1583-S.SNP.10:1012039 chr10:001012039 0 W/1012039-1012039 FN1583-S Single Base Substitution G-A INTRON HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN_N1-169-1.SNP.10:1013617 chr10:001013617 0 W/1013617-1013617 FN_N1-169-1 Single Base Substitution T-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1196-S.SNP.10:1022376 chr10:001022376 0 W/1022376-1022376 FN1196-S Single Base Substitution G-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1625-S.SNP.10:1029287 chr10:001029287 0 W/1029287-1029287 FN1625-S Single Base Substitution C-T INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.10:1029287 chr10:001029287 0 W/1029287-1029287 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.999992;DP=3865;DP4=1550,2269,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.72206e-16;MQSB=0.976979;RPB=0.974012;SGB=-77.9263;VDB=0.272255;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.10:1030548 chr10:001030548 0 W/1030548-1030548 FN474-S Single Base Substitution C-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2789-S.SNP.10:1030952 chr10:001030952 0 W/1030952-1030952 FN2789-S SNP G -> T AC=1;AN=198;BQB=0.726235;DP=4057;DP4=2149,1661,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.38567e-10;MQSB=0.484531;RPB=0.883355;SGB=65.3149;VDB=0.992376;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.10:1036736 chr10:001036736 0 W/1036736-1036736 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.985122;DP=2872;DP4=1538,1251,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.2384e-08;MQSB=0.970401;RPB=0.969204;SGB=57.786;VDB=0.413893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T287M|949|LOC_Os10g02650|protein_coding|CODING|LOC_Os10g02650.1|1|1) FN_812-4-1.SNP.10:1038127 chr10:001038127 0 W/1038127-1038127 FN_812-4-1 Single Base Substitution G-A HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN1309-S.SNP.10:1038640 chr10:001038640 0 W/1038640-1038640 FN1309-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2214-S.SNP.10:1050578 chr10:001050578 0 W/1050578-1050578 FN2214-S SNP G -> A AC=1;AN=188;BQB=0.936259;DP=3885;DP4=1538,2138,9,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.27782e-16;MQSB=0.99753;RPB=0.620888;SGB=59.414;VDB=0.717893;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.10:1050629 chr10:001050629 0 W/1050629-1050629 FN-201 Single Base Substitution G-T INTERGENIC HOMO SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2629-S.SNP.10:1053176 chr10:001053176 0 W/1053176-1053176 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.986597;DP=4736;DP4=2389,2094,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000633446;MQB=9.15564e-09;MQSB=0.421533;RPB=0.309298;SGB=61.9006;VDB=0.401719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.10:1056934 chr10:001056934 0 W/1056934-1056934 FN2487 SNP G -> A AC=1;AN=200;BQB=0.702917;DP=3641;DP4=1748,1726,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.14202e-07;MQSB=0.998706;RPB=0.220752;SGB=58.8698;VDB=0.757462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.10:1066136 chr10:001066136 0 W/1066136-1066136 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN1369-S.SNP.10:1071114 chr10:001071114 0 W/1071114-1071114 FN1369-S Single Base Substitution A-T INTRON Homo SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN347-S.SNP.10:1071114 chr10:001071114 0 W/1071114-1071114 FN347-S Single Base Substitution A-T INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2577-S.SNP.10:1074884 chr10:001074884 0 W/1074884-1074884 FN2577-S SNP G -> A AC=1;AN=186;BQB=0.985039;DP=3787;DP4=1675,1923,5,8;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.75671e-08;MQSB=0.981602;RPB=0.461766;SGB=54.144;VDB=0.770967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.10:1076482 chr10:001076482 0 W/1076482-1076482 FN1472-S Single Base Substitution C-T INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN3833-S.SNP.10:1077647 chr10:001077647 0 W/1077647-1077647 FN3833-S SNP G -> A AC=2;AN=190;BQB=0.976446;DP=2763;DP4=1337,1298,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.1346e-14;MQSB=0.925252;RPB=0.99153;SGB=108.296;VDB=0.459664;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.10:1080963 chr10:001080963 0 W/1080963-1080963 FN1015-S Single Base Substitution C-T INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN2392.SNP.10:1080963 chr10:001080963 0 W/1080963-1080963 FN2392 SNP C -> T AC=2;AN=200;BQB=0.99184;DP=4957;DP4=2140,2472,18,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.77613e-22;MQSB=0.99214;RPB=0.362776;SGB=-45.976;VDB=0.148082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.10:1080963 chr10:001080963 0 W/1080963-1080963 FN3551-S SNP C -> T AC=1;AN=188;BQB=0.992864;DP=2956;DP4=1341,1506,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.28087e-07;MQSB=0.995746;RPB=0.982188;SGB=48.979;VDB=0.407317;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.10:1080963 chr10:001080963 0 W/1080963-1080963 FN4173-S SNP C -> T AC=1;AN=170;BQB=0.999994;DP=2675;DP4=1199,1355,9,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52568e-10;MQSB=0.978341;RPB=0.88624;SGB=52.0913;VDB=0.988372;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.10:1080963 chr10:001080963 0 W/1080963-1080963 FN937-S Single Base Substitution C-T INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN1492-S.SNP.10:1081912 chr10:001081912 0 W/1081912-1081912 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2114-S.SNP.10:1084063 chr10:001084063 0 W/1084063-1084063 FN2114-S SNP G -> T AC=1;AN=168;BQB=0.0153992;DP=3663;DP4=1700,1892,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34827e-10;MQSB=0.994803;RPB=0.925225;SGB=-105.77;VDB=0.783534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R177S|335|LOC_Os10g02750|protein_coding|CODING|LOC_Os10g02750.1|4|1) FN2153-S.SNP.10:1093802 chr10:001093802 0 W/1093802-1093802 FN2153-S SNP G -> A AC=1;AN=168;BQB=0.0440187;DP=3723;DP4=2023,1676,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.8211e-08;MQSB=0.944233;RPB=0.771204;SGB=-15.3725;VDB=0.219731;EFF=INTRON(MODIFIER||||339|LOC_Os10g02770|protein_coding|CODING|LOC_Os10g02770.1|3|1) FN1675-S.SNP.10:1095189 chr10:001095189 0 W/1095189-1095189 FN1675-S SNP T -> C AC=1;AN=188;BQB=0.108734;DP=3911;DP4=1998,1880,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.53783e-11;MQSB=0.939474;RPB=0.652717;SGB=10.1681;VDB=0.296653;EFF=INTRON(MODIFIER||||339|LOC_Os10g02770|protein_coding|CODING|LOC_Os10g02770.1|3|1) FN1700-S.SNP.10:1098374 chr10:001098374 0 W/1098374-1098374 FN1700-S SNP T -> C AC=1;AN=188;BQB=0.796443;DP=3734;DP4=1928,1775,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00133905;MQB=5.47724e-08;MQSB=0.552955;RPB=0.947237;SGB=60.7873;VDB=0.0385972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.10:1102960 chr10:001102960 0 W/1102960-1102960 FN-76 Single Base Substitution G-A INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2114-S.SNP.10:1103037 chr10:001103037 0 W/1103037-1103037 FN2114-S SNP G -> T AC=1;AN=168;BQB=0.95993;DP=1927;DP4=671,1163,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.000518941;MQB=0.00015398;MQSB=0.00572971;RPB=0.847576;SGB=17.3231;VDB=0.881805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.10:1110358 chr10:001110358 0 W/1110358-1110358 FN2198-S SNP T -> A AC=1;AN=190;BQB=0.915615;DP=5007;DP4=2397,2241,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00019972;MQB=3.2619e-09;MQSB=0.951628;RPB=0.999759;SGB=50.3161;VDB=0.416184;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.10:1111079 chr10:001111079 0 W/1111079-1111079 FN-143 Single Base Substitution G-T INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3568-S.SNP.10:1114978 chr10:001114978 0 W/1114978-1114978 FN3568-S SNP G -> A AC=2;AN=188;BQB=0.996159;DP=2898;DP4=1237,1549,16,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.06823e-22;MQSB=0.872696;RPB=0.09432;SGB=167.105;VDB=0.924437;EFF=INTRON(MODIFIER||||358|LOC_Os10g02790|protein_coding|CODING|LOC_Os10g02790.1|1|1) FN3324-S.SNP.10:1119436 chr10:001119436 0 W/1119436-1119436 FN3324-S SNP G -> C AC=1;AN=184;BQB=0.936007;DP=3218;DP4=1645,1479,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.75391e-06;MQSB=0.809216;RPB=0.978385;SGB=35.1773;VDB=0.903181;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.10:1121200 chr10:001121200 0 W/1121200-1121200 FN1219-S Single Base Substitution A-C INTERGENIC HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN-202.SNP.10:1125867 chr10:001125867 0 W/1125867-1125867 FN-202 Single Base Substitution G-T INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2668-S.SNP.10:1131478 chr10:001131478 0 W/1131478-1131478 FN2668-S SNP G -> C AC=1;AN=200;BQB=0.671671;DP=4967;DP4=2755,1968,21,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.40946e-20;MQSB=0.833782;RPB=0.775176;SGB=105.163;VDB=0.851083;EFF=UTR_3_PRIME(MODIFIER||1402||311|LOC_Os10g02814|protein_coding|CODING|LOC_Os10g02814.2|3|1) FN3294-S.SNP.10:1137859 chr10:001137859 0 W/1137859-1137859 FN3294-S SNP A -> T AC=2;AN=184;BQB=0.900097;DP=2174;DP4=717,1369,2,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.87172e-10;MQSB=0.0347267;RPB=0.925909;SGB=53.3568;VDB=0.90307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.10:1138324 chr10:001138324 0 W/1138324-1138324 FN3508-S SNP G -> T AC=2;AN=188;BQB=0.92208;DP=1944;DP4=1004,865,9,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.87591e-08;MQSB=0.997033;RPB=0.558664;SGB=18.4463;VDB=0.664011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.10:1140981 chr10:001140981 0 W/1140981-1140981 FN2116-S SNP A -> T AC=1;AN=168;BQB=0.419135;DP=3030;DP4=1466,1485,9,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.35165e-10;MQSB=0.997474;RPB=0.814516;SGB=-177.758;VDB=0.397578;EFF=UTR_5_PRIME(MODIFIER||27||216|LOC_Os10g02840|protein_coding|CODING|LOC_Os10g02840.1|2|1) FN2472.SNP.10:1143788 chr10:001143788 0 W/1143788-1143788 FN2472 SNP C -> T AC=1;AN=200;BQB=0.748801;DP=3842;DP4=1856,1788,10,6;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.252733;MQB=0.98783;MQSB=1.03097e-11;RPB=0.969284;SGB=47.4799;VDB=0.708972;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.10:1146485 chr10:001146485 0 W/1146485-1146485 FN4023-S SNP A -> T AC=2;AN=168;BQB=0.910859;DP=2221;DP4=1270,834,5,7;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00450248;MQB=2.17509e-05;MQSB=0.385591;RPB=0.270779;SGB=14.8923;VDB=0.598947;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I338F|980|LOC_Os10g02850|protein_coding|CODING|LOC_Os10g02850.1|2|1) FN2432.SNP.10:1147250 chr10:001147250 0 W/1147250-1147250 FN2432 SNP G -> T AC=2;AN=200;BQB=0.869893;DP=4030;DP4=1843,1942,13,25;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00347395;MQB=1.0398e-13;MQSB=0.865013;RPB=0.913748;SGB=169.394;VDB=0.028031;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E593*|980|LOC_Os10g02850|protein_coding|CODING|LOC_Os10g02850.1|2|1) FN2432.SNP.10:1147251 chr10:001147251 0 W/1147251-1147251 FN2432 SNP A -> T AC=2;AN=200;BQB=0.999992;DP=4005;DP4=1538,1755,16,29;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.00299625;MQB=3.16755e-13;MQSB=0.000240933;RPB=0.971922;SGB=52.8295;VDB=0.0172582;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E593V|980|LOC_Os10g02850|protein_coding|CODING|LOC_Os10g02850.1|2|1) FN-169.SNP.10:1167154 chr10:001167154 0 W/1167154-1167154 FN-169 Single Base Substitution C-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4116-S.SNP.10:1170481 chr10:001170481 0 W/1170481-1170481 FN4116-S SNP C -> A AC=1;AN=182;BQB=0.588846;DP=2122;DP4=980,1050,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.03266e-06;MQSB=0.766506;RPB=0.602001;SGB=53.1331;VDB=0.707761;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.10:1174267 chr10:001174267 0 W/1174267-1174267 FN952-S Single Base Substitution A-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN952-S.SNP.10:1174268 chr10:001174268 0 W/1174268-1174268 FN952-S Single Base Substitution A-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN952-S.SNP.10:1174269 chr10:001174269 0 W/1174269-1174269 FN952-S Single Base Substitution A-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2530-S.SNP.10:1181874 chr10:001181874 0 W/1181874-1181874 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.998234;DP=4570;DP4=2144,2072,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.41557e-09;MQSB=0.924387;RPB=0.994771;SGB=6.15916;VDB=0.166738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.10:1189919 chr10:001189919 0 W/1189919-1189919 FN2323 SNP C -> G AC=1;AN=192;BQB=0.24759;DP=5087;DP4=2387,2370,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.24332e-14;MQSB=0.948863;RPB=0.98617;SGB=35.5131;VDB=0.778254;EFF=UTR_3_PRIME(MODIFIER||58||225|LOC_Os10g02920|protein_coding|CODING|LOC_Os10g02920.1|4|1) FN1384-S.SNP.10:1191786 chr10:001191786 0 W/1191786-1191786 FN1384-S Single Base Substitution C-A START_LOST HET LOC_Os10g02920 cytochrome b561, putative, expressed SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1156-XA21.SNP.10:1201175 chr10:001201175 0 W/1201175-1201175 FN1156-XA21 Single Base Substitution C-T INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN-222.SNP.10:1208198 chr10:001208198 0 W/1208198-1208198 FN-222 Single Base Substitution G-A INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3511-S.SNP.10:1209604 chr10:001209604 0 W/1209604-1209604 FN3511-S SNP T -> A AC=1;AN=188;BQB=0.957557;DP=2533;DP4=1142,1299,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.20866e-06;MQSB=0.992196;RPB=0.516773;SGB=28.8977;VDB=0.182174;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.10:1211467 chr10:001211467 0 W/1211467-1211467 FN821-S Single Base Substitution A-G INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN1286-S.SNP.10:1212343 chr10:001212343 0 W/1212343-1212343 FN1286-S Single Base Substitution A-C INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3845-S.SNP.10:1215766 chr10:001215766 0 W/1215766-1215766 FN3845-S SNP T -> C AC=2;AN=190;BQB=0.938834;DP=2549;DP4=1154,1314,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.34705e-09;MQSB=0.393608;RPB=0.697252;SGB=67.3108;VDB=0.935717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.10:1222779 chr10:001222779 0 W/1222779-1222779 FN3522-S SNP T -> A AC=1;AN=188;BQB=0.971513;DP=2674;DP4=1303,1260,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.62568e-05;MQSB=0.328857;RPB=0.469471;SGB=30.8063;VDB=0.954906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.10:1238340 chr10:001238340 0 W/1238340-1238340 FN3380-S SNP A -> G AC=2;AN=184;BQB=0.930475;DP=2762;DP4=1476,1203,11,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.91976e-14;MQSB=0.969003;RPB=0.999347;SGB=85.0529;VDB=0.691853;EFF=INTRON(MODIFIER||||386|LOC_Os10g02980|protein_coding|CODING|LOC_Os10g02980.1|9|1) FN910-S.SNP.10:1240199 chr10:001240199 0 W/1240199-1240199 FN910-S Single Base Substitution T-A INTRON HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2297.SNP.10:1251050 chr10:001251050 0 W/1251050-1251050 FN2297 SNP C -> A AC=1;AN=192;BQB=0.41098;DP=4724;DP4=2234,2137,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=25;MQ0F=0.137384;MQB=0.644188;MQSB=5.63519e-21;RPB=0.908444;SGB=23.7852;VDB=0.985918;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T47|162|LOC_Os10g03010|protein_coding|CODING|LOC_Os10g03010.1|2|1) FN1656-S.SNP.10:1251520 chr10:001251520 0 W/1251520-1251520 FN1656-S Single Base Substitution T-C INTRON HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN2782-S.SNP.10:1261342 chr10:001261342 0 W/1261342-1261342 FN2782-S SNP G -> C AC=1;AN=186;BQB=0.983357;DP=3349;DP4=1907,1180,9,4;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.83804e-07;MQSB=0.517493;RPB=0.752419;SGB=36.5539;VDB=0.245929;EFF=INTRON(MODIFIER||||998|LOC_Os10g03040|protein_coding|CODING|LOC_Os10g03040.1|2|1) FN1746-S.SNP.10:1269640 chr10:001269640 0 W/1269640-1269640 FN1746-S SNP T -> C AC=1;AN=188;BQB=0.104288;DP=4194;DP4=2118,2045,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.59149e-09;MQSB=0.992407;RPB=0.430147;SGB=-38.278;VDB=0.379578;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.10:1272713 chr10:001272713 0 W/1272713-1272713 FN4063-S SNP A -> G AC=1;AN=168;BQB=0.943441;DP=2435;DP4=1283,1051,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.80393e-07;MQSB=0.987331;RPB=0.169581;SGB=43.3113;VDB=0.00473159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.10:1274602 chr10:001274602 0 W/1274602-1274602 FN2214-S SNP C -> T AC=1;AN=190;BQB=0.95284;DP=4492;DP4=2168,2038,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.74314e-10;MQSB=0.99969;RPB=0.982492;SGB=64.5316;VDB=0.814157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1355-S.SNP.10:1275326 chr10:001275326 0 W/1275326-1275326 FN1355-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-169.SNP.10:1276121 chr10:001276121 0 W/1276121-1276121 FN-169 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g03060 retrotransposon, putative, centromere-specific, expressed SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2735-S.SNP.10:1280514 chr10:001280514 0 W/1280514-1280514 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.764306;DP=4551;DP4=2256,2029,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.60892e-05;MQSB=0.994636;RPB=0.941633;SGB=22.2439;VDB=0.937552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G1297D|1604|LOC_Os10g03070|protein_coding|CODING|LOC_Os10g03070.1|7|1) FN-102.SNP.10:1281277 chr10:001281277 0 W/1281277-1281277 FN-102 Single Base Substitution C-A INTRON HOMO SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1526-S.SNP.10:1281700 chr10:001281700 0 W/1281700-1281700 FN1526-S Single Base Substitution G-T INTRON HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1526-S.SNP.10:1281701 chr10:001281701 0 W/1281701-1281701 FN1526-S Single Base Substitution A-T INTRON HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN970-S.SNP.10:1283673 chr10:001283673 0 W/1283673-1283673 FN970-S Single Base Substitution T-C INTRON HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1415-S.SNP.10:1285812 chr10:001285812 0 W/1285812-1285812 FN1415-S Single Base Substitution T-C INTRON HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN-127.SNP.10:1293914 chr10:001293914 0 W/1293914-1293914 FN-127 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g03080 retrotransposon protein, putative, unclassified SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1237-S.SNP.10:1294112 chr10:001294112 0 W/1294112-1294112 FN1237-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g03080 retrotransposon protein, putative, unclassified SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2292.SNP.10:1298832 chr10:001298832 0 W/1298832-1298832 FN2292 SNP T -> A AC=1;AN=192;BQB=0.998742;DP=4779;DP4=1923,2401,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.45595e-15;MQSB=0.730396;RPB=0.368051;SGB=-7.9965;VDB=0.442993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3473-S.SNP.10:1299507 chr10:001299507 0 W/1299507-1299507 FN3473-S SNP C -> T AC=1;AN=184;BQB=0.994779;DP=2757;DP4=1430,1215,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000362713;MQB=1.28619e-11;MQSB=0.987869;RPB=0.920673;SGB=38.4058;VDB=0.0542546;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.10:1304240 chr10:001304240 0 W/1304240-1304240 FN772-S Single Base Substitution T-C INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3529-S.SNP.10:1313749 chr10:001313749 0 W/1313749-1313749 FN3529-S SNP C -> A AC=1;AN=188;BQB=0.966229;DP=4002;DP4=2010,1929,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.50888e-05;MQSB=0.957992;RPB=0.994666;SGB=30.8063;VDB=0.259674;EFF=INTRON(MODIFIER||||1012|LOC_Os10g03110|protein_coding|CODING|LOC_Os10g03110.1|5|1) FN1702-S.SNP.10:1315227 chr10:001315227 0 W/1315227-1315227 FN1702-S SNP C -> G AC=1;AN=188;BQB=0.700983;DP=1270;DP4=580,665,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000142727;MQSB=0.976102;RPB=0.820949;SGB=21.8113;VDB=0.722752;EFF=INTRON(MODIFIER||||1012|LOC_Os10g03110|protein_coding|CODING|LOC_Os10g03110.1|2|1) FN2447.SNP.10:1318804 chr10:001318804 0 W/1318804-1318804 FN2447 SNP G -> A AC=2;AN=200;BQB=0.999979;DP=3952;DP4=1900,1832,25,15;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000253036;MQB=1.23334e-24;MQSB=0.527648;RPB=0.999812;SGB=178.604;VDB=0.0424884;EFF=INTRON(MODIFIER||||547|LOC_Os10g03120|protein_coding|CODING|LOC_Os10g03120.1|2|1) FN2447.SNP.10:1318805 chr10:001318805 0 W/1318805-1318805 FN2447 SNP T -> A AC=2;AN=200;BQB=0.995717;DP=3955;DP4=1819,1817,25,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=5.2538e-26;MQSB=0.1063;RPB=0.999233;SGB=187.814;VDB=0.072522;EFF=INTRON(MODIFIER||||547|LOC_Os10g03120|protein_coding|CODING|LOC_Os10g03120.1|2|1) FN1746-S.SNP.10:1318857 chr10:001318857 0 W/1318857-1318857 FN1746-S SNP T -> G AC=1;AN=188;BQB=0.100147;DP=1925;DP4=1004,894,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000621757;MQSB=0.986989;RPB=0.0912027;SGB=-15.5431;VDB=0.153896;EFF=SPLICE_SITE_REGION(LOW||||547|LOC_Os10g03120|protein_coding|CODING|LOC_Os10g03120.1|2|1),INTRON(MODIFIER||||547|LOC_Os10g03120|protein_coding|CODING|LOC_Os10g03120.1|2|1) FN2472.SNP.10:1320219 chr10:001320219 0 W/1320219-1320219 FN2472 SNP C -> T AC=1;AN=200;BQB=0.477671;DP=4648;DP4=1879,2514,8,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.78826e-12;MQSB=0.978312;RPB=0.898001;SGB=76.3213;VDB=0.807972;EFF=INTRON(MODIFIER||||547|LOC_Os10g03120|protein_coding|CODING|LOC_Os10g03120.1|7|1) FN-214.SNP.10:1322269 chr10:001322269 0 W/1322269-1322269 FN-214 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2791-S.SNP.10:1325936 chr10:001325936 0 W/1325936-1325936 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.980271;DP=3922;DP4=2262,1401,27,23;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.267721;MQB=0.99435;MQSB=0;RPB=0.0509162;SGB=-703.868;VDB=0.357596;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.10:1331737 chr10:001331737 0 W/1331737-1331737 FN2424 SNP C -> A AC=1;AN=200;BQB=0.998992;DP=4609;DP4=2123,2250,12,3;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0277718;MQB=0.0333942;MQSB=2.38079e-05;RPB=0.683382;SGB=63.4749;VDB=0.482854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V271L|395|LOC_Os10g03150|protein_coding|CODING|LOC_Os10g03150.1|2|1) FN230-S.SNP.10:1333187 chr10:001333187 0 W/1333187-1333187 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2649-S.SNP.10:1338387 chr10:001338387 0 W/1338387-1338387 FN2649-S SNP G -> T AC=1;AN=200;BQB=0.998775;DP=4845;DP4=2226,2367,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29359e-12;MQSB=0.912753;RPB=0.999829;SGB=39.9056;VDB=0.744176;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.10:1341172 chr10:001341172 0 W/1341172-1341172 FN1104-S Single Base Substitution G-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN895-S.SNP.10:1343150 chr10:001343150 0 W/1343150-1343150 FN895-S Single Base Substitution T-C INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2213-S.SNP.10:1343460 chr10:001343460 0 W/1343460-1343460 FN2213-S SNP G -> A AC=1;AN=190;BQB=0.342468;DP=4921;DP4=2367,2200,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.64052e-13;MQSB=0.999035;RPB=0.967351;SGB=85.8548;VDB=0.571001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2179-S.SNP.10:1349663 chr10:001349663 0 W/1349663-1349663 FN2179-S SNP T -> G AC=2;AN=168;BQB=0.917133;DP=1928;DP4=833,1038,4,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000215474;MQSB=0.946207;RPB=0.904973;SGB=10.0307;VDB=0.369485;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.10:1349709 chr10:001349709 0 W/1349709-1349709 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN2283.SNP.10:1353092 chr10:001353092 0 W/1353092-1353092 FN2283 SNP G -> A AC=2;AN=192;BQB=0.441925;DP=4969;DP4=2279,2228,33,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.75241e-35;MQSB=0.5842;RPB=0.959278;SGB=15.7061;VDB=0.609688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S121L|225|LOC_Os10g03200|protein_coding|CODING|LOC_Os10g03200.1|4|1) FN3449-S.SNP.10:1353092 chr10:001353092 0 W/1353092-1353092 FN3449-S SNP G -> A AC=2;AN=184;BQB=0.124661;DP=3564;DP4=1618,1839,15,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.42433e-17;MQSB=0.983675;RPB=0.784061;SGB=175.352;VDB=0.864591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S121L|225|LOC_Os10g03200|protein_coding|CODING|LOC_Os10g03200.1|4|1) FN692-S.SNP.10:1353092 chr10:001353092 0 W/1353092-1353092 FN692-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g03200 retrotransposon protein, putative, unclassified SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2715-S.SNP.10:1353650 chr10:001353650 0 W/1353650-1353650 FN2715-S SNP G -> A AC=2;AN=200;BQB=0.679605;DP=4512;DP4=2091,2151,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.33354e-20;MQSB=0.871908;RPB=0.570729;SGB=105.163;VDB=0.311714;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F43|225|LOC_Os10g03200|protein_coding|CODING|LOC_Os10g03200.1|2|1) FN1689-S.SNP.10:1357310 chr10:001357310 0 W/1357310-1357310 FN1689-S SNP G -> A AC=1;AN=188;BQB=0.211333;DP=2343;DP4=1075,1240,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.58509e-05;MQSB=0.699626;RPB=0.171781;SGB=13.3597;VDB=0.335038;EFF=INTRON(MODIFIER||||393|LOC_Os10g03220|protein_coding|CODING|LOC_Os10g03220.1|1|1) FN4063-S.SNP.10:1360102 chr10:001360102 0 W/1360102-1360102 FN4063-S SNP G -> A AC=1;AN=168;BQB=0.818069;DP=2844;DP4=1247,1492,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07093e-06;MQSB=0.96734;RPB=0.662905;SGB=38.1788;VDB=0.208536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C145Y|215|LOC_Os10g03230|protein_coding|CODING|LOC_Os10g03230.1|2|1) FN3295-S.SNP.10:1360540 chr10:001360540 0 W/1360540-1360540 FN3295-S SNP T -> A AC=2;AN=184;BQB=0.662838;DP=3071;DP4=1388,1544,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.05543e-12;MQSB=0.686553;RPB=0.296131;SGB=85.0529;VDB=0.524558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.10:1362316 chr10:001362316 0 W/1362316-1362316 FN1499-S Single Base Substitution C-T INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN510-S.SNP.10:1367946 chr10:001367946 0 W/1367946-1367946 FN510-S Single Base Substitution A-G INTRON HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN2534-S.SNP.10:1376937 chr10:001376937 0 W/1376937-1376937 FN2534-S SNP G -> A AC=1;AN=198;BQB=0.759785;DP=4924;DP4=1806,2771,14,20;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.267262;MQB=0.701134;MQSB=0;RPB=0.794269;SGB=73.4614;VDB=0.599837;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.10:1382694 chr10:001382694 0 W/1382694-1382694 FN4105-S SNP T -> G AC=1;AN=182;BQB=0.987946;DP=3249;DP4=1442,1733,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.77442e-10;MQSB=0.89183;RPB=0.994601;SGB=25.655;VDB=0.192221;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.10:1383189 chr10:001383189 0 W/1383189-1383189 FN1751-S SNP C -> G AC=1;AN=188;BQB=0.179659;DP=4044;DP4=1895,2110,14,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52473e-10;MQSB=0.983997;RPB=0.88173;SGB=-7.39363;VDB=0.798393;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.10:1389658 chr10:001389658 0 W/1389658-1389658 FN-218 Single Base Substitution G-C INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2279-S.SNP.10:1395228 chr10:001395228 0 W/1395228-1395228 FN2279-S SNP A -> C AC=2;AN=190;BQB=0.363981;DP=4979;DP4=2231,2484,18,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.91649e-27;MQSB=0.798361;RPB=0.839288;SGB=171.148;VDB=0.877887;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.10:1400651 chr10:001400651 0 W/1400651-1400651 FN465-S Single Base Substitution A-C INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN597-S.SNP.10:1406301 chr10:001406301 0 W/1406301-1406301 FN597-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g03320 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2664-S.SNP.10:1417487 chr10:001417487 0 W/1417487-1417487 FN2664-S SNP C -> T AC=1;AN=200;BQB=0.980306;DP=5284;DP4=2699,2312,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.86821e-19;MQSB=0.978083;RPB=0.86468;SGB=101.557;VDB=0.706266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.10:1417492 chr10:001417492 0 W/1417492-1417492 FN2664-S SNP C -> G AC=1;AN=200;BQB=0.424205;DP=5218;DP4=2608,2308,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.58007e-21;MQSB=0.996558;RPB=0.993805;SGB=105.163;VDB=0.825628;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.10:1419596 chr10:001419596 0 W/1419596-1419596 FN4258-S SNP G -> A AC=1;AN=170;BQB=0.916192;DP=2359;DP4=1265,1042,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.28974e-05;MQSB=0.997804;RPB=0.667503;SGB=25.6601;VDB=0.0907276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.10:1423778 chr10:001423778 0 W/1423778-1423778 FN2175-S SNP A -> T AC=2;AN=168;BQB=0.512412;DP=3711;DP4=1762,1873,23,28;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=3.24739e-11;MQSB=2.35621e-07;RPB=0.408564;SGB=220.544;VDB=0.560548;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.10:1424870 chr10:001424870 0 W/1424870-1424870 W554-1-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. W554-1-1.SNP.10:1424871 chr10:001424871 0 W/1424871-1424871 W554-1-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1517-S.SNP.10:1424915 chr10:001424915 0 W/1424915-1424915 FN1517-S Single Base Substitution C-G INTERGENIC Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1725-S.SNP.10:1432691 chr10:001432691 0 W/1432691-1432691 FN1725-S SNP A -> T AC=1;AN=188;BQB=0.59539;DP=2757;DP4=1266,1471,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.26194e-05;MQSB=0.611387;RPB=0.744184;SGB=18.4463;VDB=0.750486;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.10:1440878 chr10:001440878 0 W/1440878-1440878 FN1029-S Single Base Substitution G-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN882-S.SNP.10:1457093 chr10:001457093 0 W/1457093-1457093 FN882-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN819-S.SNP.10:1457402 chr10:001457402 0 W/1457402-1457402 FN819-S Single Base Substitution G-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3509-S.SNP.10:1457792 chr10:001457792 0 W/1457792-1457792 FN3509-S SNP A -> G AC=1;AN=188;BQB=0.998811;DP=2448;DP4=1167,1164,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27394e-07;MQSB=0.839697;RPB=0.491504;SGB=32.441;VDB=0.302434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.10:1460100 chr10:001460100 0 W/1460100-1460100 FN2339 SNP G -> A AC=1;AN=192;BQB=0.003273;DP=5019;DP4=2289,2283,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000167356;MQSB=0.998879;RPB=0.251861;SGB=-15.333;VDB=0.987999;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.10:1467203 chr10:001467203 0 W/1467203-1467203 FN4300-S SNP T -> G AC=2;AN=170;BQB=0.270268;DP=2817;DP4=1207,1522,9,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.12312e-10;MQSB=0.996967;RPB=0.796452;SGB=79.6325;VDB=0.673091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.10:1468130 chr10:001468130 0 W/1468130-1468130 FN2795-S SNP A -> C AC=1;AN=198;BQB=0.684883;DP=4320;DP4=2234,1846,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000231481;MQB=4.07367e-09;MQSB=0.884367;RPB=0.251875;SGB=50.9344;VDB=0.141325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.10:1473936 chr10:001473936 0 W/1473936-1473936 FN3900-S SNP C -> T AC=2;AN=158;BQB=0.688668;DP=2197;DP4=1003,1091,8,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.92434e-06;MQSB=0.00278133;RPB=0.995143;SGB=55.806;VDB=0.235019;EFF=INTERGENIC(MODIFIER||||||||||1) FN492-S.SNP.10:1473997 chr10:001473997 0 W/1473997-1473997 FN492-S Single Base Substitution C-T INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3883-S.SNP.10:1475522 chr10:001475522 0 W/1475522-1475522 FN3883-S SNP T -> A AC=1;AN=158;BQB=0.977696;DP=2558;DP4=1340,1086,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.10301e-05;MQSB=0.99965;RPB=0.482605;SGB=17.2267;VDB=0.301859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3883-S.SNP.10:1475525 chr10:001475525 0 W/1475525-1475525 FN3883-S SNP G -> A AC=1;AN=158;BQB=0.999998;DP=2559;DP4=1346,1084,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.6131e-06;MQSB=0.999109;RPB=0.949916;SGB=20.5959;VDB=0.493954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2258-S.SNP.10:1476532 chr10:001476532 0 W/1476532-1476532 FN2258-S SNP T -> C AC=2;AN=190;BQB=0.714758;DP=5028;DP4=2250,2450,15,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78535e-16;MQSB=0.930306;RPB=0.856946;SGB=69.6295;VDB=0.187604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.10:1477806 chr10:001477806 0 W/1477806-1477806 FN2192-S SNP G -> C AC=2;AN=190;BQB=0.64263;DP=4810;DP4=2416,2033,31,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.0004158;MQB=1.20372e-27;MQSB=0.66596;RPB=0.374147;SGB=5.60984;VDB=0.976498;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.10:1481899 chr10:001481899 0 W/1481899-1481899 FN-52 Single Base Substitution C-T INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN242-S.SNP.10:1496067 chr10:001496067 0 W/1496067-1496067 FN242-S Single Base Substitution A-G INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN-288.SNP.10:1496875 chr10:001496875 0 W/1496875-1496875 FN-288 Single Base Substitution G-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2115-S.SNP.10:1497450 chr10:001497450 0 W/1497450-1497450 FN2115-S SNP C -> G AC=1;AN=168;BQB=0.228001;DP=3054;DP4=1717,1286,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.45118e-09;MQSB=0.969196;RPB=0.931459;SGB=-14.0801;VDB=0.471378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.10:1504648 chr10:001504648 0 W/1504648-1504648 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.306886;DP=4834;DP4=2118,2324,21,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.452e-24;MQSB=0.819526;RPB=0.593592;SGB=139.163;VDB=0.135633;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C7|407|LOC_Os10g03490|protein_coding|CODING|LOC_Os10g03490.1|1|1) FN2120-S.SNP.10:1507596 chr10:001507596 0 W/1507596-1507596 FN2120-S SNP G -> C AC=1;AN=168;BQB=0.895181;DP=3715;DP4=1878,1794,13,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.29258e-19;MQSB=0.954982;RPB=0.79024;SGB=99.9335;VDB=0.777292;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.10:1521065 chr10:001521065 0 W/1521065-1521065 FN1606-S Single Base Substitution G-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1606-S.SNP.10:1521066 chr10:001521066 0 W/1521066-1521066 FN1606-S Single Base Substitution A-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN462-S.SNP.10:1524654 chr10:001524654 0 W/1524654-1524654 FN462-S Single Base Substitution C-T INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN461-S.SNP.10:1528046 chr10:001528046 0 W/1528046-1528046 FN461-S Single Base Substitution T-G INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN4087-S.SNP.10:1528228 chr10:001528228 0 W/1528228-1528228 FN4087-S SNP T -> G AC=1;AN=182;BQB=0.976568;DP=2971;DP4=1366,1521,1,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.86233e-07;MQSB=0.99564;RPB=0.999927;SGB=39.6007;VDB=0.448352;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.10:1530622 chr10:001530622 0 W/1530622-1530622 FN1049-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN1388-S.SNP.10:1538107 chr10:001538107 0 W/1538107-1538107 FN1388-S Single Base Substitution C-T INTERGENIC HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN620-S.SNP.10:1538854 chr10:001538854 0 W/1538854-1538854 FN620-S Single Base Substitution T-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3994-S.SNP.10:1540391 chr10:001540391 0 W/1540391-1540391 FN3994-S SNP T -> A AC=1;AN=168;BQB=0.33436;DP=2920;DP4=1348,1414,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00104981;MQSB=0.28099;RPB=0.998965;SGB=-1.53256;VDB=0.398191;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.10:1548295 chr10:001548295 0 W/1548295-1548295 FN507-S Single Base Substitution G-T INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN507-S.SNP.10:1548297 chr10:001548297 0 W/1548297-1548297 FN507-S Single Base Substitution G-T INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN4071-S.SNP.10:1549240 chr10:001549240 0 W/1549240-1549240 FN4071-S SNP T -> G AC=1;AN=182;BQB=0.997364;DP=2540;DP4=1207,1256,12,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.00702e-09;MQSB=0.93935;RPB=0.812917;SGB=53.182;VDB=0.424774;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.10:1553072 chr10:001553072 0 W/1553072-1553072 FN2124-S SNP C -> G AC=1;AN=168;BQB=0.0523467;DP=3577;DP4=1797,1721,18,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.07176e-17;MQSB=0.94781;RPB=0.589535;SGB=-88.4675;VDB=0.893653;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.10:1553919 chr10:001553919 0 W/1553919-1553919 FN4150-S SNP A -> T AC=1;AN=170;BQB=0.971433;DP=2488;DP4=1195,1189,16,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.49496e-14;MQSB=0.9806;RPB=0.993109;SGB=114.512;VDB=0.505999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.10:1559008 chr10:001559008 0 W/1559008-1559008 FN3509-S SNP T -> G AC=1;AN=188;BQB=0.724068;DP=2571;DP4=1257,1245,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.09347e-06;MQSB=0.942096;RPB=0.190307;SGB=18.4463;VDB=0.327707;EFF=INTRON(MODIFIER||||457|LOC_Os10g03600|protein_coding|CODING|LOC_Os10g03600.1|1|1),INTRON(MODIFIER||||457|LOC_Os10g03600|protein_coding|CODING|LOC_Os10g03600.2|1|1) FN2612-S.SNP.10:1572530 chr10:001572530 0 W/1572530-1572530 FN2612-S SNP T -> C AC=1;AN=198;BQB=0.847668;DP=4689;DP4=1965,2506,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.053103;MQB=0.500127;MQSB=0.425649;RPB=0.999939;SGB=63.3342;VDB=0.906718;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.10:1589648 chr10:001589648 0 W/1589648-1589648 FN1448-S Single Base Substitution G-A INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1274-S.SNP.10:1606824 chr10:001606824 0 W/1606824-1606824 FN1274-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1274-S.SNP.10:1606825 chr10:001606825 0 W/1606825-1606825 FN1274-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN-95.SNP.10:1620832 chr10:001620832 0 W/1620832-1620832 FN-95 Single Base Substitution C-T INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1028-S.SNP.10:1621017 chr10:001621017 0 W/1621017-1621017 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3546-S.SNP.10:1628265 chr10:001628265 0 W/1628265-1628265 FN3546-S SNP A -> G AC=1;AN=188;BQB=0.997522;DP=2453;DP4=1049,1310,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.35479e-07;MQSB=0.480918;RPB=0.659379;SGB=28.8977;VDB=0.58057;EFF=INTRON(MODIFIER||||1078|LOC_Os10g03660|protein_coding|CODING|LOC_Os10g03660.1|4|1) FN985-S.SNP.10:1628778 chr10:001628778 0 W/1628778-1628778 FN985-S Single Base Substitution C-T INTRON HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN689-S.SNP.10:1629306 chr10:001629306 0 W/1629306-1629306 FN689-S Single Base Substitution G-A INTRON HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2444.SNP.10:1639590 chr10:001639590 0 W/1639590-1639590 FN2444 SNP G -> A AC=1;AN=200;BQB=0.361211;DP=4532;DP4=1799,2339,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05381e-11;MQSB=0.980776;RPB=0.907496;SGB=-10.6896;VDB=0.835298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.10:1643330 chr10:001643330 0 W/1643330-1643330 FN1272-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g03669 expressed protein SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN1320-S.SNP.10:1651793 chr10:001651793 0 W/1651793-1651793 FN1320-S Single Base Substitution C-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3541-S.SNP.10:1652165 chr10:001652165 0 W/1652165-1652165 FN3541-S SNP A -> G AC=1;AN=188;BQB=0.914198;DP=3704;DP4=1877,1670,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00836933;MQB=7.70961e-07;MQSB=0.0906988;RPB=0.490474;SGB=26.0762;VDB=0.13063;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.10:1652204 chr10:001652204 0 W/1652204-1652204 FN1450-S Single Base Substitution A-G INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1426-S.SNP.10:1653697 chr10:001653697 0 W/1653697-1653697 FN1426-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3838-S.SNP.10:1658670 chr10:001658670 0 W/1658670-1658670 FN3838-S SNP C -> A AC=1;AN=190;BQB=0.955659;DP=3017;DP4=1450,1472,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77097e-08;MQSB=0.95805;RPB=0.857068;SGB=32.5467;VDB=0.187282;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G207C|423|LOC_Os10g03690|protein_coding|CODING|LOC_Os10g03690.1|2|1) FN477-S.SNP.10:1671034 chr10:001671034 0 W/1671034-1671034 FN477-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. W472-5-1.SNP.10:1674775 chr10:001674775 0 W/1674775-1674775 W472-5-1 Single Base Substitution A-G INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. W472-5-1.SNP.10:1676434 chr10:001676434 0 W/1676434-1676434 W472-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2540-S.SNP.10:1678099 chr10:001678099 0 W/1678099-1678099 FN2540-S SNP A -> G AC=2;AN=198;BQB=0.823666;DP=3859;DP4=1807,1853,23,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.17399e-16;MQSB=0.575551;RPB=0.252758;SGB=94.0758;VDB=0.172148;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T27|153|LOC_Os10g03720|protein_coding|CODING|LOC_Os10g03720.1|1|1) FN526-S.SNP.10:1680199 chr10:001680199 0 W/1680199-1680199 FN526-S Single Base Substitution C-T INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-164.SNP.10:1688173 chr10:001688173 0 W/1688173-1688173 FN-164 Single Base Substitution G-C INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN978-S.SNP.10:1691227 chr10:001691227 0 W/1691227-1691227 FN978-S Single Base Substitution G-A START_GAINED HET LOC_Os10g03740 OsFBX348 - F-box domain containing protein, expressed SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1440-S.SNP.10:1696295 chr10:001696295 0 W/1696295-1696295 FN1440-S Single Base Substitution A-T INTRON HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN-256.SNP.10:1696628 chr10:001696628 0 W/1696628-1696628 FN-256 Single Base Substitution C-T INTRON HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3463-S.SNP.10:1697392 chr10:001697392 0 W/1697392-1697392 FN3463-S SNP C -> A AC=1;AN=184;BQB=0.996991;DP=3397;DP4=1648,1675,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.45168e-08;MQSB=0.76584;RPB=0.491565;SGB=48.7425;VDB=0.231779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D55Y|441|LOC_Os10g03750|protein_coding|CODING|LOC_Os10g03750.1|2|1) FN3463-S.SNP.10:1697393 chr10:001697393 0 W/1697393-1697393 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.898194;DP=3389;DP4=1644,1677,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53189e-09;MQSB=0.83181;RPB=0.572434;SGB=39.2697;VDB=0.185218;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R54|441|LOC_Os10g03750|protein_coding|CODING|LOC_Os10g03750.1|2|1) FN901-S.SNP.10:1699819 chr10:001699819 0 W/1699819-1699819 FN901-S Single Base Substitution T-C INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN-71.SNP.10:1702930 chr10:001702930 0 W/1702930-1702930 FN-71 Single Base Substitution A-T UTR_5_PRIME HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN2619-S.SNP.10:1717945 chr10:001717945 0 W/1717945-1717945 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.976352;DP=4112;DP4=2094,1766,32,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.12401e-30;MQSB=0.983691;RPB=0.814123;SGB=127.959;VDB=0.77268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.10:1721385 chr10:001721385 0 W/1721385-1721385 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN730-S.SNP.10:1722490 chr10:001722490 0 W/1722490-1722490 FN730-S Single Base Substitution T-A INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN-197.SNP.10:1736218 chr10:001736218 0 W/1736218-1736218 FN-197 Single Base Substitution G-A INTRON HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN2324.SNP.10:1737849 chr10:001737849 0 W/1737849-1737849 FN2324 SNP C -> A AC=1;AN=192;BQB=0.861128;DP=5083;DP4=2465,2259,18,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.60813e-17;MQSB=0.67011;RPB=0.931524;SGB=-41.8626;VDB=0.940129;EFF=INTRON(MODIFIER||||697|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.1|3|1),INTRON(MODIFIER||||622|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.2|3|1) FN3815-S.SNP.10:1738415 chr10:001738415 0 W/1738415-1738415 FN3815-S SNP C -> T AC=2;AN=190;BQB=0.930863;DP=2785;DP4=1207,1441,15,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.94414e-20;MQSB=0.891416;RPB=0.771124;SGB=140.173;VDB=0.915835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V151I|697|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V151I|622|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.2|3|1),SPLICE_SITE_REGION(LOW||||697|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.1|3|1),SPLICE_SITE_REGION(LOW||||622|LOC_Os10g03830|protein_coding|CODING|LOC_Os10g03830.2|3|1) FN-353.SNP.10:1741558 chr10:001741558 0 W/1741558-1741558 FN-353 Single Base Substitution A-G INTRON HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN712-S.SNP.10:1742161 chr10:001742161 0 W/1742161-1742161 FN712-S Single Base Substitution G-A INTRON HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3343-S.SNP.10:1747233 chr10:001747233 0 W/1747233-1747233 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.869215;DP=4036;DP4=1508,2233,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.32606e-12;MQSB=0.599737;RPB=0.975941;SGB=17.4548;VDB=0.938344;EFF=INTRON(MODIFIER||||125|LOC_Os10g03850|protein_coding|CODING|LOC_Os10g03850.5|1|1),INTRON(MODIFIER||||211|LOC_Os10g03850|protein_coding|CODING|LOC_Os10g03850.4|1|1),INTRON(MODIFIER||||363|LOC_Os10g03850|protein_coding|CODING|LOC_Os10g03850.2|1|1) FN1200-S.SNP.10:1752726 chr10:001752726 0 W/1752726-1752726 FN1200-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g03855 expressed protein SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN446-S.SNP.10:1754092 chr10:001754092 0 W/1754092-1754092 FN446-S Single Base Substitution G-T INTERGENIC HET SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN_770-6-1.SNP.10:1756347 chr10:001756347 0 W/1756347-1756347 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_770-6-1.SNP.10:1756349 chr10:001756349 0 W/1756349-1756349 FN_770-6-1 Single Base Substitution A-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_770-6-1.SNP.10:1756350 chr10:001756350 0 W/1756350-1756350 FN_770-6-1 Single Base Substitution C-T Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2290.SNP.10:1760358 chr10:001760358 0 W/1760358-1760358 FN2290 SNP G -> A AC=2;AN=192;BQB=0.114767;DP=4992;DP4=2375,2245,38,33;HOB=0.0206163;ICB=0.494846;MQ=33;MQ0F=0.0188301;MQB=0.0708184;MQSB=0;RPB=0.991577;SGB=91.8296;VDB=0.11412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.10:1760359 chr10:001760359 0 W/1760359-1760359 FN2290 SNP C -> T AC=2;AN=192;BQB=0.052841;DP=4958;DP4=2321,2103,35,32;HOB=0.0206163;ICB=0.494846;MQ=33;MQ0F=0.0195643;MQB=0.0562178;MQSB=0;RPB=0.999713;SGB=85.5722;VDB=0.180616;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.10:1760360 chr10:001760360 0 W/1760360-1760360 FN2290 SNP C -> T AC=2;AN=192;BQB=0.484746;DP=4971;DP4=2326,2165,32,31;HOB=0.0206163;ICB=0.494846;MQ=33;MQ0F=0.0189097;MQB=0.0278694;MQSB=0;RPB=0.964246;SGB=146.874;VDB=0.113146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.10:1762827 chr10:001762827 0 W/1762827-1762827 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.999043;DP=3149;DP4=1200,1838,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0117498;MQB=0.1589;MQSB=0.000222398;RPB=0.828201;SGB=43.2083;VDB=0.12829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.10:1765893 chr10:001765893 0 W/1765893-1765893 FN3301-S SNP G -> A AC=2;AN=184;BQB=0.992117;DP=3200;DP4=1227,1878,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.4934e-14;MQSB=0.903951;RPB=0.998148;SGB=112.047;VDB=0.583744;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.10:1765985 chr10:001765985 0 W/1765985-1765985 FN-335 Single Base Substitution T-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. W276-2-1.SNP.10:1767781 chr10:001767781 0 W/1767781-1767781 W276-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2116-S.SNP.10:1769930 chr10:001769930 0 W/1769930-1769930 FN2116-S SNP C -> A AC=1;AN=168;BQB=0.296832;DP=4146;DP4=2147,1952,15,17;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.000482393;MQB=0.00150886;MQSB=0.000433306;RPB=0.662416;SGB=-118.616;VDB=0.493212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.10:1778965 chr10:001778965 0 W/1778965-1778965 FN2550-S SNP G -> A AC=1;AN=198;BQB=0.965606;DP=3779;DP4=1822,1747,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.77325e-05;MQSB=0.920857;RPB=0.999581;SGB=26.5745;VDB=0.911144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.10:1782460 chr10:001782460 0 W/1782460-1782460 FN2223-S SNP T -> C AC=1;AN=190;BQB=0.953694;DP=4314;DP4=2133,1796,13,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14738e-15;MQSB=0.369212;RPB=0.966801;SGB=82.301;VDB=0.266316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.10:1787925 chr10:001787925 0 W/1787925-1787925 FN1545-S Single Base Substitution G-T INTRON HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2691-S.SNP.10:1790951 chr10:001790951 0 W/1790951-1790951 FN2691-S SNP C -> T AC=1;AN=200;BQB=0.842657;DP=4979;DP4=2236,2469,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.92457e-10;MQSB=0.949213;RPB=0.88722;SGB=39.9056;VDB=0.939316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.10:1795342 chr10:001795342 0 W/1795342-1795342 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.987183;DP=4792;DP4=2043,2541,8,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000208681;MQB=5.58126e-13;MQSB=0.50268;RPB=0.213481;SGB=72.7161;VDB=0.982782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.10:1799169 chr10:001799169 0 W/1799169-1799169 FN3545-S SNP A -> G AC=1;AN=188;BQB=0.457225;DP=3044;DP4=1575,1393,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.95008e-10;MQSB=0.932005;RPB=0.877103;SGB=57.244;VDB=0.227814;EFF=INTERGENIC(MODIFIER||||||||||1) FN260-S.SNP.10:1801348 chr10:001801348 0 W/1801348-1801348 FN260-S Single Base Substitution C-T INTRON HOMO SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3534-S.SNP.10:1802367 chr10:001802367 0 W/1802367-1802367 FN3534-S SNP A -> G AC=1;AN=188;BQB=0.781283;DP=2344;DP4=1117,1020,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68929e-07;MQSB=0.783377;RPB=0.212249;SGB=32.441;VDB=0.373713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.10:1808541 chr10:001808541 0 W/1808541-1808541 FN2779-S SNP G -> C AC=1;AN=198;BQB=0.927524;DP=4265;DP4=1889,2157,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0145369;MQB=0.357946;MQSB=0;RPB=0.652017;SGB=32.9588;VDB=0.936239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H155D|535|LOC_Os10g03970|protein_coding|CODING|LOC_Os10g03970.1|4|1) FN2243-S.SNP.10:1819338 chr10:001819338 0 W/1819338-1819338 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.461375;DP=4511;DP4=2070,2130,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37171e-10;MQSB=0.78306;RPB=0.998597;SGB=44.0907;VDB=0.6826;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.10:1820324 chr10:001820324 0 W/1820324-1820324 FN1568-S Single Base Substitution A-T INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1717-S.SNP.10:1820324 chr10:001820324 0 W/1820324-1820324 FN1717-S SNP A -> T AC=1;AN=188;BQB=0.637302;DP=2431;DP4=1281,1131,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.20147e-05;MQSB=0.974559;RPB=0.34217;SGB=13.3597;VDB=0.897907;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.10:1821373 chr10:001821373 0 W/1821373-1821373 FN2223-S SNP A -> G AC=1;AN=190;BQB=0.919904;DP=4700;DP4=2362,1954,11,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.15923e-16;MQSB=0.96924;RPB=0.919363;SGB=24.3115;VDB=0.199618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.10:1823737 chr10:001823737 0 W/1823737-1823737 FN1009-S Single Base Substitution C-T INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1463-S.SNP.10:1823921 chr10:001823921 0 W/1823921-1823921 FN1463-S Single Base Substitution G-A INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN1463-S.SNP.10:1823922 chr10:001823922 0 W/1823922-1823922 FN1463-S Single Base Substitution C-A INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3869-S.SNP.10:1825212 chr10:001825212 0 W/1825212-1825212 FN3869-S SNP T -> C AC=1;AN=158;BQB=0.941493;DP=2931;DP4=1300,1547,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00034118;MQB=1.51288e-05;MQSB=0.975661;RPB=0.81389;SGB=27.3346;VDB=0.723146;EFF=INTERGENIC(MODIFIER||||||||||1) FN585-S.SNP.10:1829025 chr10:001829025 0 W/1829025-1829025 FN585-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g04000 STE_MEKK_ste11_MAP3K.22 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN-67.SNP.10:1831294 chr10:001831294 0 W/1831294-1831294 FN-67 Single Base Substitution A-G INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN3308-S.SNP.10:1839302 chr10:001839302 0 W/1839302-1839302 FN3308-S SNP T -> C AC=2;AN=184;BQB=0.988284;DP=3261;DP4=1586,1457,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.28793e-13;MQSB=0.996463;RPB=0.490392;SGB=53.5365;VDB=0.961506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S177P|359|LOC_Os10g04020|protein_coding|CODING|LOC_Os10g04020.1|1|1) FN2794-S.SNP.10:1839352 chr10:001839352 0 W/1839352-1839352 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.318239;DP=3481;DP4=1661,1568,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.65544e-11;MQSB=0.994747;RPB=0.447699;SGB=72.5245;VDB=0.0361945;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G193|359|LOC_Os10g04020|protein_coding|CODING|LOC_Os10g04020.1|1|1) FN3788-S.SNP.10:1840288 chr10:001840288 0 W/1840288-1840288 FN3788-S SNP A -> T AC=2;AN=190;BQB=0.570839;DP=2488;DP4=1220,1193,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.87894e-13;MQSB=0.955075;RPB=0.806538;SGB=71.6393;VDB=0.604316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.10:1842477 chr10:001842477 0 W/1842477-1842477 FN1541-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2356.SNP.10:1843996 chr10:001843996 0 W/1843996-1843996 FN2356 SNP A -> C AC=1;AN=192;BQB=0.512329;DP=5093;DP4=2488,2307,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.22452e-07;MQSB=0.119706;RPB=0.755201;SGB=62.9035;VDB=0.142842;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.10:1845890 chr10:001845890 0 W/1845890-1845890 FN3491-S SNP C -> T AC=1;AN=188;BQB=0.866643;DP=2736;DP4=1421,1251,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72949e-10;MQSB=0.856042;RPB=0.950964;SGB=67.1521;VDB=0.406889;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.10:1846026 chr10:001846026 0 W/1846026-1846026 FN-152 Single Base Substitution G-A INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN2292.SNP.10:1849956 chr10:001849956 0 W/1849956-1849956 FN2292 SNP C -> T AC=2;AN=192;BQB=0.0356305;DP=4634;DP4=2157,2209,18,17;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.00151057;MQB=7.89437e-10;MQSB=0.0131622;RPB=0.465831;SGB=114.631;VDB=0.992936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V288I|786|LOC_Os10g04040|protein_coding|CODING|LOC_Os10g04040.1|4|1) FN2765-S.SNP.10:1852779 chr10:001852779 0 W/1852779-1852779 FN2765-S SNP T -> A AC=1;AN=198;BQB=0.896523;DP=4422;DP4=2170,1957,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.46021e-07;MQSB=0.853211;RPB=0.985377;SGB=16.3688;VDB=0.780165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.10:1854531 chr10:001854531 0 W/1854531-1854531 FN3427-S SNP G -> A AC=2;AN=184;BQB=0.957767;DP=3037;DP4=1435,1471,11,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.81851e-14;MQSB=0.993677;RPB=0.368819;SGB=74.4875;VDB=0.185089;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.10:1856280 chr10:001856280 0 W/1856280-1856280 FN-403 Single Base Substitution C-T INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN3537-S.SNP.10:1857188 chr10:001857188 0 W/1857188-1857188 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.962578;DP=2798;DP4=1304,1427,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.42415e-11;MQSB=0.405051;RPB=0.825746;SGB=53.7007;VDB=0.333128;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.10:1865518 chr10:001865518 0 W/1865518-1865518 FN3748-S SNP G -> A AC=1;AN=190;BQB=0.67135;DP=2770;DP4=1394,1296,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0016565;MQSB=0.977753;RPB=0.810057;SGB=30.8803;VDB=0.868994;EFF=UTR_3_PRIME(MODIFIER||1704||240|LOC_Os10g04050|protein_coding|CODING|LOC_Os10g04050.1|4|1),UTR_3_PRIME(MODIFIER||1704||240|LOC_Os10g04050|protein_coding|CODING|LOC_Os10g04050.2|4|1) FN1196-S.SNP.10:1867615 chr10:001867615 0 W/1867615-1867615 FN1196-S Single Base Substitution C-T INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN825-S.SNP.10:1868146 chr10:001868146 0 W/1868146-1868146 FN825-S Single Base Substitution A-G INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2223-S.SNP.10:1887807 chr10:001887807 0 W/1887807-1887807 FN2223-S SNP G -> C AC=1;AN=190;BQB=0.999866;DP=5119;DP4=2579,2211,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000195351;MQB=2.8804e-11;MQSB=0.0174324;RPB=0.88198;SGB=33.8752;VDB=0.17975;EFF=INTERGENIC(MODIFIER||||||||||1) FN-327.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN-327 Single Base Substitution G-A INTERGENIC HET SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1403-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN1403-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1610-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN1610-S Single Base Substitution G-A INTERGENIC Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN1703-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN1703-S SNP G -> A AC=2;AN=188;BQB=0.47084;DP=3751;DP4=1520,2163,24,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.97964e-19;MQSB=0.999849;RPB=0.184215;SGB=-46.4986;VDB=0.851583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN2124-S SNP G -> A AC=1;AN=168;BQB=0.931741;DP=4000;DP4=1668,2266,15,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.07751e-14;MQSB=0.99926;RPB=0.780154;SGB=-43.4892;VDB=0.638184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN2187-S SNP G -> A AC=2;AN=190;BQB=0.801024;DP=5107;DP4=2306,2383,21,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.93419e-22;MQSB=0.905403;RPB=0.957399;SGB=102.83;VDB=0.671422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2360.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN2360 SNP G -> A AC=1;AN=192;BQB=0.59465;DP=4941;DP4=2275,2330,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000202388;MQB=1.0182e-10;MQSB=0.913817;RPB=0.497756;SGB=39.1713;VDB=0.517404;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN337-S Single Base Substitution G-A INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3937-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN3937-S SNP G -> A AC=2;AN=158;BQB=0.773475;DP=2742;DP4=1280,1347,14,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000364697;MQB=1.95773e-15;MQSB=0.541096;RPB=0.913431;SGB=98.093;VDB=0.979586;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN819-S Single Base Substitution G-A INTERGENIC HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN994-S.SNP.10:1895170 chr10:001895170 0 W/1895170-1895170 FN994-S Single Base Substitution G-A INTERGENIC HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN2157-S.SNP.10:1912240 chr10:001912240 0 W/1912240-1912240 FN2157-S SNP G -> A AC=1;AN=168;BQB=0.278937;DP=3148;DP4=1951,1145,22,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.48161e-12;MQSB=0.999884;RPB=0.86045;SGB=-108.339;VDB=0.531195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.10:1913225 chr10:001913225 0 W/1913225-1913225 FN3833-S SNP A -> T AC=1;AN=190;BQB=0.980218;DP=2621;DP4=1364,1109,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53161e-06;MQSB=0.797512;RPB=0.867459;SGB=18.552;VDB=0.213726;EFF=UTR_5_PRIME(MODIFIER||998||288|LOC_Os10g04130|protein_coding|CODING|LOC_Os10g04130.1|1|1) FN2611-S.SNP.10:1916536 chr10:001916536 0 W/1916536-1916536 FN2611-S SNP G -> T AC=1;AN=198;BQB=0.630742;DP=5072;DP4=2285,2480,12,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.34914e-17;MQSB=0.657954;RPB=0.563242;SGB=127.947;VDB=0.519747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.10:1917827 chr10:001917827 0 W/1917827-1917827 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.998811;DP=5071;DP4=2354,2408,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.42518e-09;MQSB=0.997888;RPB=0.0186997;SGB=76.4186;VDB=0.455826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.10:1919697 chr10:001919697 0 W/1919697-1919697 FN2653-S SNP T -> A AC=1;AN=198;BQB=0.344378;DP=4722;DP4=2227,2278,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.31523e-14;MQSB=0.843924;RPB=0.576292;SGB=72.7161;VDB=0.272003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.10:1922344 chr10:001922344 0 W/1922344-1922344 FN1636-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN-370.SNP.10:1926576 chr10:001926576 0 W/1926576-1926576 FN-370 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN906-S.SNP.10:1927194 chr10:001927194 0 W/1927194-1927194 FN906-S Single Base Substitution C-T INTRON HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN884-S.SNP.10:1932365 chr10:001932365 0 W/1932365-1932365 FN884-S Single Base Substitution C-G INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN3484-S.SNP.10:1938031 chr10:001938031 0 W/1938031-1938031 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.88918;DP=2601;DP4=1415,1128,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00422914;MQB=0.000434993;MQSB=0.216084;RPB=0.414639;SGB=35.1773;VDB=0.694248;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.10:1938665 chr10:001938665 0 W/1938665-1938665 FN416-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g04170 expressed protein SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3374-S.SNP.10:1942782 chr10:001942782 0 W/1942782-1942782 FN3374-S SNP A -> C AC=1;AN=184;BQB=0.97646;DP=2693;DP4=1388,1221,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.034534;MQB=0.663001;MQSB=1.61278e-26;RPB=0.780974;SGB=53.3568;VDB=0.716566;EFF=INTRON(MODIFIER||||584|LOC_Os10g04170|protein_coding|CODING|LOC_Os10g04170.1|5|1) FN828-S.SNP.10:1945080 chr10:001945080 0 W/1945080-1945080 FN828-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN1527-S.SNP.10:1953673 chr10:001953673 0 W/1953673-1953673 FN1527-S Single Base Substitution C-T INTRON Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN_N1-26-1.SNP.10:1953673 chr10:001953673 0 W/1953673-1953673 FN_N1-26-1 Single Base Substitution C-T Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1288-S.SNP.10:1955936 chr10:001955936 0 W/1955936-1955936 FN1288-S Single Base Substitution C-G INTRON HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN2353.SNP.10:1959425 chr10:001959425 0 W/1959425-1959425 FN2353 SNP C -> A AC=1;AN=192;BQB=0.876765;DP=4870;DP4=2231,2428,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00143737;MQB=1.31591e-10;MQSB=0.980955;RPB=0.5231;SGB=50.4731;VDB=0.683856;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.10:1964329 chr10:001964329 0 W/1964329-1964329 FN-288 Single Base Substitution A-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN4132-S.SNP.10:1964620 chr10:001964620 0 W/1964620-1964620 FN4132-S SNP G -> A AC=1;AN=182;BQB=1;DP=2707;DP4=1389,1251,9,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.27935e-07;MQSB=0.845403;RPB=0.875746;SGB=44.1115;VDB=0.705435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3363-S.SNP.10:1965424 chr10:001965424 0 W/1965424-1965424 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.843948;DP=2948;DP4=1499,1370,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000339213;MQB=1.9927e-07;MQSB=0.648732;RPB=0.921952;SGB=66.8296;VDB=0.177717;EFF=INTERGENIC(MODIFIER||||||||||1) FN4016-S.SNP.10:1971205 chr10:001971205 0 W/1971205-1971205 FN4016-S SNP G -> A AC=1;AN=168;BQB=0.919422;DP=2902;DP4=1455,1341,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00930393;MQB=0.00310209;MQSB=0.00437275;RPB=0.90363;SGB=69.8961;VDB=0.165509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A795V|827|LOC_Os10g04230|protein_coding|CODING|LOC_Os10g04230.1|3|1) FN3818-S.SNP.10:1972021 chr10:001972021 0 W/1972021-1972021 FN3818-S SNP A -> G AC=2;AN=190;BQB=0.971645;DP=3067;DP4=1393,1554,25,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000326052;MQB=4.22443e-18;MQSB=0.625623;RPB=0.977518;SGB=190.265;VDB=0.696009;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F523S|827|LOC_Os10g04230|protein_coding|CODING|LOC_Os10g04230.1|3|1) FN3565-S.SNP.10:1973532 chr10:001973532 0 W/1973532-1973532 FN3565-S SNP A -> G AC=1;AN=188;BQB=0.914684;DP=3094;DP4=1457,1544,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00937298;MQB=0.000737945;MQSB=4.24625e-05;RPB=0.0634665;SGB=71.6954;VDB=0.359373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M81T|827|LOC_Os10g04230|protein_coding|CODING|LOC_Os10g04230.1|1|1) FN530-S.SNP.10:1974669 chr10:001974669 0 W/1974669-1974669 FN530-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g04240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN854-S.SNP.10:1974672 chr10:001974672 0 W/1974672-1974672 FN854-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g04240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN804-S.SNP.10:1975894 chr10:001975894 0 W/1975894-1975894 FN804-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os10g04240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. W252-6-1.SNP.10:1982188 chr10:001982188 0 W/1982188-1982188 W252-6-1 Single Base Substitution G-A INTRON HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3867-S.SNP.10:1983386 chr10:001983386 0 W/1983386-1983386 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.77642;DP=2525;DP4=1205,1227,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.08241e-05;MQSB=0.986395;RPB=0.969155;SGB=23.9652;VDB=0.646725;EFF=INTRON(MODIFIER||||403|LOC_Os10g04250|protein_coding|CODING|LOC_Os10g04250.1|3|1) FN3867-S.SNP.10:1983387 chr10:001983387 0 W/1983387-1983387 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.922432;DP=2529;DP4=1161,1214,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.55227e-06;MQSB=0.991161;RPB=0.981558;SGB=-2.02218;VDB=0.733862;EFF=INTRON(MODIFIER||||403|LOC_Os10g04250|protein_coding|CODING|LOC_Os10g04250.1|3|1) FN3557-S.SNP.10:1983481 chr10:001983481 0 W/1983481-1983481 FN3557-S SNP G -> A AC=2;AN=188;BQB=0.920014;DP=2821;DP4=1459,1260,18,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01245e-20;MQSB=0.996641;RPB=0.754552;SGB=139.845;VDB=0.611129;EFF=INTRON(MODIFIER||||403|LOC_Os10g04250|protein_coding|CODING|LOC_Os10g04250.1|3|1) FN3557-S.SNP.10:1983482 chr10:001983482 0 W/1983482-1983482 FN3557-S SNP G -> A AC=2;AN=188;BQB=0.919109;DP=2818;DP4=1435,1268,18,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.91719e-21;MQSB=0.999916;RPB=0.823275;SGB=139.845;VDB=0.605293;EFF=INTRON(MODIFIER||||403|LOC_Os10g04250|protein_coding|CODING|LOC_Os10g04250.1|3|1) FN4123-S.SNP.10:1989107 chr10:001989107 0 W/1989107-1989107 FN4123-S SNP G -> A AC=1;AN=182;BQB=0.986769;DP=3235;DP4=1604,1572,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.86098e-10;MQSB=0.970066;RPB=0.723183;SGB=23.1441;VDB=0.658519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P27L|200|LOC_Os10g04260|protein_coding|CODING|LOC_Os10g04260.1|1|1) FN4123-S.SNP.10:1989108 chr10:001989108 0 W/1989108-1989108 FN4123-S SNP G -> A AC=1;AN=182;BQB=0.966486;DP=3228;DP4=1603,1571,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.17328e-09;MQSB=0.924217;RPB=0.816613;SGB=53.1331;VDB=0.874256;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P27S|200|LOC_Os10g04260|protein_coding|CODING|LOC_Os10g04260.1|1|1) FN2767-S.SNP.10:1990547 chr10:001990547 0 W/1990547-1990547 FN2767-S SNP A -> T AC=2;AN=198;BQB=0.863705;DP=3911;DP4=1756,1922,15,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.55846e-17;MQSB=0.852493;RPB=0.771327;SGB=-4.31386;VDB=0.447008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.10:1993000 chr10:001993000 0 W/1993000-1993000 FN2492 SNP C -> T AC=2;AN=200;BQB=0.622066;DP=4571;DP4=2084,2175,24,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04891e-23;MQSB=0.430963;RPB=0.990779;SGB=178.604;VDB=0.479556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.10:1996294 chr10:001996294 0 W/1996294-1996294 FN2768-S SNP A -> T AC=1;AN=198;BQB=0.430288;DP=4530;DP4=2141,2189,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000662252;MQB=3.22203e-09;MQSB=0.982984;RPB=0.725479;SGB=67.9293;VDB=0.187308;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.10:1996590 chr10:001996590 0 W/1996590-1996590 FN3434-S SNP T -> C AC=1;AN=184;BQB=0.824512;DP=2926;DP4=1404,1463,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00444293;MQB=0.00182008;MQSB=0.999758;RPB=0.764754;SGB=39.699;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.10:2008946 chr10:002008946 0 W/2008946-2008946 FN1488-S Single Base Substitution A-T INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3842-S.SNP.10:2010018 chr10:002010018 0 W/2010018-2010018 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.856213;DP=2552;DP4=1568,896,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0270376;MQB=0.357492;MQSB=2.46263e-14;RPB=0.796999;SGB=60.9777;VDB=0.81942;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.10:2010528 chr10:002010528 0 W/2010528-2010528 FN1323-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1554-S.SNP.10:2010528 chr10:002010528 0 W/2010528-2010528 FN1554-S Single Base Substitution T-A INTERGENIC Homo SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1722-S.SNP.10:2010528 chr10:002010528 0 W/2010528-2010528 FN1722-S SNP T -> A AC=1;AN=188;BQB=0.976142;DP=3109;DP4=1535,1550,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0186555;MQB=0.0148839;MQSB=1.98688e-06;RPB=0.962768;SGB=46.6141;VDB=0.317973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.10:2012674 chr10:002012674 0 W/2012674-2012674 FN2544-S SNP C -> G AC=1;AN=198;BQB=0.968281;DP=4356;DP4=1985,2150,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=19;MQ0F=0.348944;MQB=0.904392;MQSB=4.38605e-15;RPB=0.98797;SGB=42.3199;VDB=0.496307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.10:2017811 chr10:002017811 0 W/2017811-2017811 FN1330-S Single Base Substitution G-C INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN-213.SNP.10:2024563 chr10:002024563 0 W/2024563-2024563 FN-213 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN1416-S.SNP.10:2027730 chr10:002027730 0 W/2027730-2027730 FN1416-S Single Base Substitution A-C INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3342-S.SNP.10:2031083 chr10:002031083 0 W/2031083-2031083 FN3342-S SNP T -> C AC=2;AN=184;BQB=0.93402;DP=3112;DP4=1530,1466,11,13;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0302057;MQB=3.41455e-10;MQSB=0.647262;RPB=0.309734;SGB=103.004;VDB=0.873415;EFF=INTRON(MODIFIER||||2151|LOC_Os10g04290|protein_coding|CODING|LOC_Os10g04290.1|13|1) FN-249.SNP.10:2032071 chr10:002032071 0 W/2032071-2032071 FN-249 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g04290 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN466-S.SNP.10:2035149 chr10:002035149 0 W/2035149-2035149 FN466-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g04316 retrotransposon protein, putative, unclassified, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1327-S.SNP.10:2039964 chr10:002039964 0 W/2039964-2039964 FN1327-S Single Base Substitution A-C INTRON HOMO SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN801-S.SNP.10:2039964 chr10:002039964 0 W/2039964-2039964 FN801-S Single Base Substitution A-C INTRON HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1533-S.SNP.10:2041592 chr10:002041592 0 W/2041592-2041592 FN1533-S Single Base Substitution T-C INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN-106.SNP.10:2047711 chr10:002047711 0 W/2047711-2047711 FN-106 Single Base Substitution C-G INTRON HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2670-S.SNP.10:2048969 chr10:002048969 0 W/2048969-2048969 FN2670-S SNP G -> A AC=1;AN=198;BQB=0.121047;DP=4580;DP4=2096,2003,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000218341;MQB=2.94843e-10;MQSB=0.010261;RPB=0.977463;SGB=76.3213;VDB=0.0536644;EFF=INTRON(MODIFIER||||281|LOC_Os10g04342|protein_coding|CODING|LOC_Os10g04342.1|1|1) FN2639-S.SNP.10:2053388 chr10:002053388 0 W/2053388-2053388 FN2639-S SNP C -> A AC=1;AN=198;BQB=0.768481;DP=4959;DP4=2537,2022,18,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.21943e-16;MQSB=0.998089;RPB=0.967991;SGB=58.1418;VDB=0.214714;EFF=INTRON(MODIFIER||||281|LOC_Os10g04342|protein_coding|CODING|LOC_Os10g04342.1|1|1) FN428-S.SNP.10:2054499 chr10:002054499 0 W/2054499-2054499 FN428-S Single Base Substitution G-T INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2304.SNP.10:2054975 chr10:002054975 0 W/2054975-2054975 FN2304 SNP C -> T AC=1;AN=192;BQB=0.217246;DP=4697;DP4=2207,2179,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.01676e-12;MQSB=0.989427;RPB=0.656556;SGB=51.9931;VDB=0.24691;EFF=UTR_5_PRIME(MODIFIER||277||281|LOC_Os10g04342|protein_coding|CODING|LOC_Os10g04342.1|2|1) FN3463-S.SNP.10:2063514 chr10:002063514 0 W/2063514-2063514 FN3463-S SNP T -> C AC=1;AN=184;BQB=0.967772;DP=2718;DP4=1370,1281,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.88363e-09;MQSB=0.997048;RPB=0.980963;SGB=57.786;VDB=0.759007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E164G|503|LOC_Os10g04380|protein_coding|CODING|LOC_Os10g04380.1|1|1) FN3479-S.SNP.10:2064914 chr10:002064914 0 W/2064914-2064914 FN3479-S SNP T -> A AC=1;AN=184;BQB=0.967483;DP=2889;DP4=1158,1628,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=0.00189863;MQSB=0.807452;RPB=0.672526;SGB=35.1773;VDB=0.420379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.10:2066447 chr10:002066447 0 W/2066447-2066447 FN1568-S Single Base Substitution G-T INTERGENIC HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN837-S.SNP.10:2072352 chr10:002072352 0 W/2072352-2072352 FN837-S Single Base Substitution T-G INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3831-S.SNP.10:2076899 chr10:002076899 0 W/2076899-2076899 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.633461;DP=2715;DP4=1159,1455,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000188758;MQSB=0.999755;RPB=0.973817;SGB=30.8803;VDB=0.655325;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.10:2084016 chr10:002084016 0 W/2084016-2084016 FN1252-S Single Base Substitution T-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN669-S.SNP.10:2086008 chr10:002086008 0 W/2086008-2086008 FN669-S Single Base Substitution G-A INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN531-S.SNP.10:2089870 chr10:002089870 0 W/2089870-2089870 FN531-S Single Base Substitution T-A INTRON HOMO SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN2465.SNP.10:2119222 chr10:002119222 0 W/2119222-2119222 FN2465 SNP G -> T AC=1;AN=200;BQB=0.958149;DP=4506;DP4=2010,2264,16,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0197514;MQB=2.39019e-05;MQSB=0.0254652;RPB=0.997873;SGB=123.342;VDB=0.396993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.10:2125742 chr10:002125742 0 W/2125742-2125742 FN2348 SNP T -> C AC=1;AN=192;BQB=0.134292;DP=5271;DP4=2096,2529,13,26;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.70991e-14;MQSB=4.84317e-08;RPB=0.171512;SGB=-219.584;VDB=0.29853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.10:2130609 chr10:002130609 0 W/2130609-2130609 FN2330 SNP T -> A AC=2;AN=192;BQB=0.919553;DP=4866;DP4=2389,2225,23,30;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=4.49389e-31;MQSB=0.154379;RPB=0.190507;SGB=63.6713;VDB=0.0119583;EFF=INTRON(MODIFIER||||486|LOC_Os10g04490|protein_coding|CODING|LOC_Os10g04490.1|2|1) FN2330.SNP.10:2130611 chr10:002130611 0 W/2130611-2130611 FN2330 SNP A -> T AC=2;AN=192;BQB=0.894763;DP=4847;DP4=2371,2270,23,27;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.01421e-30;MQSB=0.133276;RPB=0.534421;SGB=113.537;VDB=0.0223316;EFF=INTRON(MODIFIER||||486|LOC_Os10g04490|protein_coding|CODING|LOC_Os10g04490.1|2|1) FN2330.SNP.10:2130612 chr10:002130612 0 W/2130612-2130612 FN2330 SNP C -> T AC=2;AN=192;BQB=0.982502;DP=4855;DP4=2369,2239,24,27;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=6.40311e-30;MQSB=0.117442;RPB=0.811991;SGB=171.661;VDB=0.0173531;EFF=INTRON(MODIFIER||||486|LOC_Os10g04490|protein_coding|CODING|LOC_Os10g04490.1|2|1) FN2602-S.SNP.10:2132773 chr10:002132773 0 W/2132773-2132773 FN2602-S SNP A -> C AC=2;AN=198;BQB=0.830022;DP=4347;DP4=1939,2187,16,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.44974e-19;MQSB=0.834821;RPB=0.966232;SGB=76.0565;VDB=0.880553;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.10:2139977 chr10:002139977 0 W/2139977-2139977 FN949-S Single Base Substitution A-T INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN593-S.SNP.10:2140903 chr10:002140903 0 W/2140903-2140903 FN593-S Single Base Substitution G-A INTERGENIC HOMO SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN1623-S.SNP.10:2141532 chr10:002141532 0 W/2141532-2141532 FN1623-S Single Base Substitution A-T INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN569-S.SNP.10:2143933 chr10:002143933 0 W/2143933-2143933 FN569-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN3287-S.SNP.10:2147823 chr10:002147823 0 W/2147823-2147823 FN3287-S SNP A -> G AC=2;AN=184;BQB=0.967404;DP=2893;DP4=1388,1377,13,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47535e-20;MQSB=0.992567;RPB=0.469243;SGB=120.271;VDB=0.0161771;EFF=INTRON(MODIFIER||||142|LOC_Os10g04520|protein_coding|CODING|LOC_Os10g04520.1|1|1) FN4111-S.SNP.10:2149198 chr10:002149198 0 W/2149198-2149198 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.967869;DP=2783;DP4=1425,1285,9,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.58583e-13;MQSB=0.988092;RPB=0.957991;SGB=74.2472;VDB=0.325692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P120S|213|LOC_Os10g04530|protein_coding|CODING|LOC_Os10g04530.1|4|1) FN4136-S.SNP.10:2153219 chr10:002153219 0 W/2153219-2153219 FN4136-S SNP A -> T AC=1;AN=170;BQB=0.398633;DP=2400;DP4=1340,1004,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.71844e-05;MQSB=0.991265;RPB=0.990884;SGB=43.4296;VDB=0.256379;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.10:2153313 chr10:002153313 0 W/2153313-2153313 FN-59 Single Base Substitution T-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1636-S.SNP.10:2154234 chr10:002154234 0 W/2154234-2154234 FN1636-S Single Base Substitution G-A INTERGENIC HET SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2282.SNP.10:2167070 chr10:002167070 0 W/2167070-2167070 FN2282 SNP G -> A AC=1;AN=190;BQB=0.922806;DP=4875;DP4=2277,2354,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55023e-08;MQSB=0.88118;RPB=0.909882;SGB=53.7748;VDB=0.514339;EFF=INTERGENIC(MODIFIER||||||||||1) FN3803-S.SNP.10:2179251 chr10:002179251 0 W/2179251-2179251 FN3803-S SNP G -> A AC=2;AN=190;BQB=0.599232;DP=3276;DP4=1606,1558,15,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=5.06111e-11;MQSB=0.693414;RPB=0.853421;SGB=144.727;VDB=0.000551067;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T304I|343|LOC_Os10g04580|protein_coding|CODING|LOC_Os10g04580.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T230I|269|LOC_Os10g04580|protein_coding|CODING|LOC_Os10g04580.2|7|1) FN2536-S.SNP.10:2186417 chr10:002186417 0 W/2186417-2186417 FN2536-S SNP G -> C AC=1;AN=198;BQB=0.899251;DP=4409;DP4=2123,2102,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.68439e-05;MQSB=0.992726;RPB=0.119883;SGB=31.1689;VDB=0.229708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R291T|406|LOC_Os10g04590|protein_coding|CODING|LOC_Os10g04590.1|1|1) FN1719-S.SNP.10:2194088 chr10:002194088 0 W/2194088-2194088 FN1719-S SNP C -> T AC=2;AN=188;BQB=0.0795555;DP=3437;DP4=1638,1734,19,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.40747e-19;MQSB=0.973945;RPB=0.93884;SGB=-0.330801;VDB=0.978189;EFF=UTR_3_PRIME(MODIFIER||759||386|LOC_Os10g04600|protein_coding|CODING|LOC_Os10g04600.2|2|1),UTR_3_PRIME(MODIFIER||759||386|LOC_Os10g04600|protein_coding|CODING|LOC_Os10g04600.1|2|1),INTRON(MODIFIER||||386|LOC_Os10g04600|protein_coding|CODING|LOC_Os10g04600.3|2|1) FN486-S.SNP.10:2200180 chr10:002200180 0 W/2200180-2200180 FN486-S Single Base Substitution G-A INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4031-S.SNP.10:2201519 chr10:002201519 0 W/2201519-2201519 FN4031-S SNP C -> T AC=2;AN=168;BQB=0.15901;DP=2406;DP4=1262,983,14,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.53731e-09;MQSB=0.937191;RPB=0.828952;SGB=82.7794;VDB=0.759026;EFF=UTR_5_PRIME(MODIFIER||246||369|LOC_Os10g04620|protein_coding|CODING|LOC_Os10g04620.1|1|1),UTR_5_PRIME(MODIFIER||246||223|LOC_Os10g04620|protein_coding|CODING|LOC_Os10g04620.2|1|1) FN3887-S.SNP.10:2207772 chr10:002207772 0 W/2207772-2207772 FN3887-S SNP C -> T AC=1;AN=158;BQB=0.378108;DP=2181;DP4=1282,830,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=41;MQ0F=0;MQB=0.00128511;MQSB=0.0319012;RPB=0.9887;SGB=51.4366;VDB=0.697825;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.10:2207772 chr10:002207772 0 W/2207772-2207772 W360-2S-2 Single Base Substitution C-T INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1219-S.SNP.10:2208840 chr10:002208840 0 W/2208840-2208840 FN1219-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1724-S.SNP.10:2213852 chr10:002213852 0 W/2213852-2213852 FN1724-S SNP T -> C AC=1;AN=188;BQB=0.98044;DP=3160;DP4=1934,1199,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.00146151;MQSB=0.183148;RPB=0.942882;SGB=53.7007;VDB=0.660997;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.10:2214095 chr10:002214095 0 W/2214095-2214095 FN824-S Single Base Substitution A-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN590-S.SNP.10:2214171 chr10:002214171 0 W/2214171-2214171 FN590-S Single Base Substitution T-A INTERGENIC HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN469-S.SNP.10:2226329 chr10:002226329 0 W/2226329-2226329 FN469-S Single Base Substitution T-G INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN3919-S.SNP.10:2229012 chr10:002229012 0 W/2229012-2229012 FN3919-S SNP G -> T AC=2;AN=158;BQB=0.913945;DP=2512;DP4=1226,1186,13,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.23806e-18;MQSB=0.877397;RPB=0.992773;SGB=130.087;VDB=0.558643;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G374|927|LOC_Os10g04674|protein_coding|CODING|LOC_Os10g04674.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G374|927|LOC_Os10g04674|protein_coding|CODING|LOC_Os10g04674.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G374|925|LOC_Os10g04674|protein_coding|CODING|LOC_Os10g04674.3|2|1) FN1430-S.SNP.10:2240093 chr10:002240093 0 W/2240093-2240093 FN1430-S Single Base Substitution A-T INTRON HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2614-S.SNP.10:2242239 chr10:002242239 0 W/2242239-2242239 FN2614-S SNP T -> C AC=1;AN=198;BQB=0.624316;DP=4196;DP4=2044,1929,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.23564e-05;MQSB=0.999889;RPB=0.446968;SGB=35.7638;VDB=0.605799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.10:2251473 chr10:002251473 0 W/2251473-2251473 FN2259-S SNP T -> A AC=1;AN=190;BQB=0.986491;DP=3943;DP4=1832,1676,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00472677;MQSB=0.771789;RPB=0.998219;SGB=25.439;VDB=0.580586;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S253|659|LOC_Os10g04720|protein_coding|CODING|LOC_Os10g04720.1|1|1) FN3487-S.SNP.10:2254065 chr10:002254065 0 W/2254065-2254065 FN3487-S SNP A -> T AC=2;AN=184;BQB=0.998245;DP=2870;DP4=1179,1551,14,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.56936e-17;MQSB=0.744619;RPB=0.628065;SGB=143.7;VDB=0.445313;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.10:2259276 chr10:002259276 0 W/2259276-2259276 FN976-S Single Base Substitution C-A INTRON HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN3852-S.SNP.10:2260722 chr10:002260722 0 W/2260722-2260722 FN3852-S SNP C -> A AC=1;AN=158;BQB=0.956909;DP=2381;DP4=1005,1311,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.40669e-07;MQSB=0.976898;RPB=0.0335074;SGB=23.9652;VDB=0.101636;EFF=INTRON(MODIFIER||||655|LOC_Os10g04730|protein_coding|CODING|LOC_Os10g04730.1|3|1) FN-235.SNP.10:2267999 chr10:002267999 0 W/2267999-2267999 FN-235 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN976-S.SNP.10:2274562 chr10:002274562 0 W/2274562-2274562 FN976-S Single Base Substitution C-G INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN2473.SNP.10:2276932 chr10:002276932 0 W/2276932-2276932 FN2473 SNP A -> G AC=1;AN=200;BQB=0.871292;DP=4661;DP4=1967,2427,15,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=4.05749e-05;MQSB=0.0128371;RPB=0.489749;SGB=45.1159;VDB=0.839118;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.10:2280063 chr10:002280063 0 W/2280063-2280063 FN360-S Single Base Substitution G-A INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2788-S.SNP.10:2282791 chr10:002282791 0 W/2282791-2282791 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.854362;DP=3616;DP4=1458,1967,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.000553097;MQB=0.00919896;MQSB=1.39734e-05;RPB=0.803831;SGB=63.3342;VDB=0.0961008;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.10:2284525 chr10:002284525 0 W/2284525-2284525 FN_N1-119-1 Single Base Substitution G-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2765-S.SNP.10:2289958 chr10:002289958 0 W/2289958-2289958 FN2765-S SNP T -> C AC=1;AN=198;BQB=0.53868;DP=4357;DP4=2114,2061,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.94903e-11;MQSB=0.984543;RPB=0.172375;SGB=81.7147;VDB=0.489428;EFF=INTRON(MODIFIER||||323|LOC_Os10g04770|protein_coding|CODING|LOC_Os10g04770.1|1|1) FN1094-S.SNP.10:2293733 chr10:002293733 0 W/2293733-2293733 FN1094-S Single Base Substitution A-G INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1464-S.SNP.10:2294052 chr10:002294052 0 W/2294052-2294052 FN1464-S Single Base Substitution A-T INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1556-S.SNP.10:2296033 chr10:002296033 0 W/2296033-2296033 FN1556-S Single Base Substitution G-A INTERGENIC Homo SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN3057-S.SNP.10:2296631 chr10:002296631 0 W/2296631-2296631 FN3057-S SNP C -> A AC=1;AN=184;BQB=0.446167;DP=2550;DP4=1372,1106,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.64358e-07;MQSB=0.760289;RPB=0.857241;SGB=32.2261;VDB=0.611913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.10:2302502 chr10:002302502 0 W/2302502-2302502 FN1263-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1525-S.SNP.10:2303604 chr10:002303604 0 W/2303604-2303604 FN1525-S Single Base Substitution A-G INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN503-S.SNP.10:2303754 chr10:002303754 0 W/2303754-2303754 FN503-S Single Base Substitution C-T INTERGENIC HOMO SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN1334-S.SNP.10:2331198 chr10:002331198 0 W/2331198-2331198 FN1334-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2674-S.SNP.10:2331590 chr10:002331590 0 W/2331590-2331590 FN2674-S SNP G -> T AC=1;AN=198;BQB=0.412195;DP=6136;DP4=2959,2935,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.00195567;MQB=0.00490823;MQSB=0.396627;RPB=0.787352;SGB=61.9006;VDB=0.524188;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.10:2333817 chr10:002333817 0 W/2333817-2333817 FN850-S Single Base Substitution T-G INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN1042-S.SNP.10:2334864 chr10:002334864 0 W/2334864-2334864 FN1042-S Single Base Substitution C-T INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN244-S.SNP.10:2337941 chr10:002337941 0 W/2337941-2337941 FN244-S Single Base Substitution A-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4271-S.SNP.10:2381917 chr10:002381917 0 W/2381917-2381917 FN4271-S SNP A -> T AC=2;AN=170;BQB=0.982886;DP=1298;DP4=546,669,5,11;HOB=0.0232526;ICB=0.494188;MQ=33;MQ0F=0.0508475;MQB=0.818363;MQSB=1.18985e-16;RPB=0.999447;SGB=65.6427;VDB=0.669814;EFF=INTERGENIC(MODIFIER||||||||||1) 701-1.SNP.10:2386853 chr10:002386853 0 W/2386853-2386853 701-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g04900 OsFBX364 - F-box domain containing protein, expressed SNo: 1435, Mutant_ID: 701-1, Generation: M2, Mutations: 36, Genes: 19, Seed availability: Yes. FN1456-S.SNP.10:2389544 chr10:002389544 0 W/2389544-2389544 FN1456-S Single Base Substitution G-A INTRON HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2158-S.SNP.10:2389924 chr10:002389924 0 W/2389924-2389924 FN2158-S SNP G -> A AC=1;AN=168;BQB=0.044228;DP=3843;DP4=2148,1647,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.01223;MQB=5.26643e-09;MQSB=8.06038e-17;RPB=0.935476;SGB=-103.201;VDB=0.835632;EFF=INTRON(MODIFIER||||513|LOC_Os10g04900|protein_coding|CODING|LOC_Os10g04900.1|1|1) FN-74.SNP.10:2391811 chr10:002391811 0 W/2391811-2391811 FN-74 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g04900 OsFBX364 - F-box domain containing protein, expressed SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN3994-S.SNP.10:2394817 chr10:002394817 0 W/2394817-2394817 FN3994-S SNP T -> C AC=2;AN=168;BQB=0.72746;DP=2553;DP4=1314,1136,7,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.36272e-10;MQSB=0.979762;RPB=0.663822;SGB=83.1885;VDB=0.853867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.10:2401396 chr10:002401396 0 W/2401396-2401396 FN3766-S SNP T -> C AC=2;AN=190;BQB=0.780366;DP=2979;DP4=1433,1406,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.2064e-10;MQSB=0.991105;RPB=0.344712;SGB=75.1932;VDB=0.464596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.10:2406213 chr10:002406213 0 W/2406213-2406213 FN3517-S SNP G -> T AC=1;AN=188;BQB=0.804533;DP=3065;DP4=1394,1601,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.64953e-05;MQSB=0.934581;RPB=0.997862;SGB=44.4357;VDB=0.791805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.10:2410284 chr10:002410284 0 W/2410284-2410284 FN3780-S SNP G -> T AC=1;AN=190;BQB=0.971854;DP=2852;DP4=1063,1705,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.0107206;MQSB=0.00169014;RPB=0.990436;SGB=39.9877;VDB=0.853504;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.10:2410846 chr10:002410846 0 W/2410846-2410846 FN1282-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2249-S.SNP.10:2415633 chr10:002415633 0 W/2415633-2415633 FN2249-S SNP G -> T AC=1;AN=190;BQB=0.996859;DP=5196;DP4=2311,2425,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22605e-06;MQSB=0.906458;RPB=0.906424;SGB=50.3161;VDB=0.126186;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.10:2419635 chr10:002419635 0 W/2419635-2419635 FN2437 SNP G -> T AC=1;AN=200;BQB=0.763294;DP=5044;DP4=2637,2100,15,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.13769e-09;MQSB=0.851332;RPB=0.944455;SGB=83.5316;VDB=0.635343;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.10:2421564 chr10:002421564 0 W/2421564-2421564 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.9796;DP=2338;DP4=1046,1159,13,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000427716;MQB=8.85759e-16;MQSB=0.959063;RPB=0.740015;SGB=49.1957;VDB=0.377254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.10:2423889 chr10:002423889 0 W/2423889-2423889 FN2378 SNP T -> A AC=2;AN=190;BQB=0.68896;DP=3401;DP4=2262,929,26,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.68675e-23;MQSB=0.363078;RPB=0.663229;SGB=163.319;VDB=0.832304;EFF=INTRON(MODIFIER||||425|LOC_Os10g04980|protein_coding|CODING|LOC_Os10g04980.1|2|1) FN2378.SNP.10:2423890 chr10:002423890 0 W/2423890-2423890 FN2378 SNP T -> A AC=2;AN=190;BQB=0.186474;DP=3407;DP4=2250,943,27,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.34206e-22;MQSB=0.427235;RPB=0.654542;SGB=87.8939;VDB=0.840022;EFF=INTRON(MODIFIER||||425|LOC_Os10g04980|protein_coding|CODING|LOC_Os10g04980.1|2|1) FN3549-S.SNP.10:2427105 chr10:002427105 0 W/2427105-2427105 FN3549-S SNP G -> T AC=1;AN=188;BQB=0.932802;DP=2436;DP4=1191,1180,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.19464e-05;MQSB=0.99656;RPB=0.731681;SGB=21.8113;VDB=0.408947;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.10:2430615 chr10:002430615 0 W/2430615-2430615 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g04990 expressed protein SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN518-S.SNP.10:2435728 chr10:002435728 0 W/2435728-2435728 FN518-S Single Base Substitution C-T INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN2782-S.SNP.10:2437289 chr10:002437289 0 W/2437289-2437289 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.643452;DP=3756;DP4=1742,1856,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000130314;MQSB=0.821074;RPB=0.993379;SGB=36.5539;VDB=0.42097;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.10:2441793 chr10:002441793 0 W/2441793-2441793 FN_N1-116-1 Single Base Substitution C-T Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN3677-S.SNP.10:2443528 chr10:002443528 0 W/2443528-2443528 FN3677-S SNP C -> T AC=1;AN=190;BQB=0.689326;DP=2768;DP4=1187,1457,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0025289;MQB=0.0161226;MQSB=0.832746;RPB=0.592241;SGB=46.7622;VDB=0.640624;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.10:2451311 chr10:002451311 0 W/2451311-2451311 FN963-S Single Base Substitution C-T INTERGENIC HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN2437.SNP.10:2454326 chr10:002454326 0 W/2454326-2454326 FN2437 SNP T -> C AC=1;AN=200;BQB=0.780248;DP=3793;DP4=1415,1535,12,14;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.85717e-09;MQSB=1.59531e-05;RPB=0.626561;SGB=-38.869;VDB=0.352353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D447G|530|LOC_Os10g05020|protein_coding|CODING|LOC_Os10g05020.1|1|1) FN855-S.SNP.10:2474153 chr10:002474153 0 W/2474153-2474153 FN855-S Single Base Substitution C-T INTERGENIC HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN1658-S.SNP.10:2479073 chr10:002479073 0 W/2479073-2479073 FN1658-S SNP C -> T AC=1;AN=188;BQB=0.958642;DP=3485;DP4=1925,1513,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.20884e-08;MQSB=0.998649;RPB=0.970541;SGB=10.1681;VDB=0.0614485;EFF=INTRON(MODIFIER||||1004|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.1|2|1),INTRON(MODIFIER||||815|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.3|2|1) FN1658-S.SNP.10:2479074 chr10:002479074 0 W/2479074-2479074 FN1658-S SNP G -> T AC=1;AN=188;BQB=0.354505;DP=3474;DP4=1923,1487,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.83041e-08;MQSB=0.998178;RPB=0.969559;SGB=-37.3645;VDB=0.110129;EFF=INTRON(MODIFIER||||1004|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.1|2|1),INTRON(MODIFIER||||815|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.3|2|1) FN1521-S.SNP.10:2480570 chr10:002480570 0 W/2480570-2480570 FN1521-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN3486-S.SNP.10:2482788 chr10:002482788 0 W/2482788-2482788 FN3486-S SNP A -> C AC=1;AN=184;BQB=0.978139;DP=2580;DP4=1226,1272,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.12267e-09;MQSB=0.910097;RPB=0.876838;SGB=39.2697;VDB=0.658584;EFF=INTRON(MODIFIER||||1004|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.1|12|1),INTRON(MODIFIER||||873|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.2|10|1),INTRON(MODIFIER||||815|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.3|11|1) FN1094-S.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN1094-S Single Base Substitution G-A INTRON HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1466-S.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN1466-S Single Base Substitution G-A INTRON Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1568-S.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN1568-S Single Base Substitution G-A INTRON HET SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1717-S.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN1717-S SNP G -> A AC=2;AN=188;BQB=0.744474;DP=3031;DP4=904,2070,12,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.46235e-11;MQSB=0.529651;RPB=0.890357;SGB=-79.383;VDB=0.133323;EFF=INTRON(MODIFIER||||1004|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.1|16|1),INTRON(MODIFIER||||873|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.2|14|1),INTRON(MODIFIER||||815|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.3|15|1) FN2333.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN2333 SNP G -> A AC=2;AN=192;BQB=0.999142;DP=4964;DP4=2346,2306,25,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.12449e-28;MQSB=0.951494;RPB=0.976618;SGB=62.107;VDB=0.140744;EFF=INTRON(MODIFIER||||1004|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.1|16|1),INTRON(MODIFIER||||873|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.2|14|1),INTRON(MODIFIER||||815|LOC_Os10g05069|protein_coding|CODING|LOC_Os10g05069.3|15|1) FN242-S.SNP.10:2484291 chr10:002484291 0 W/2484291-2484291 FN242-S Single Base Substitution G-A INTRON HOMO SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN872-S.SNP.10:2498218 chr10:002498218 0 W/2498218-2498218 FN872-S Single Base Substitution G-A INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3555-S.SNP.10:2500273 chr10:002500273 0 W/2500273-2500273 FN3555-S SNP G -> A AC=1;AN=188;BQB=0.959435;DP=2825;DP4=1269,1495,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000353982;MQB=1.14853e-11;MQSB=0.998645;RPB=0.698244;SGB=103.498;VDB=0.511564;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.10:2501806 chr10:002501806 0 W/2501806-2501806 FN2668-S SNP T -> C AC=1;AN=200;BQB=0.974916;DP=4480;DP4=2059,2186,11,16;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0;MQB=0.0133163;MQSB=0.446209;RPB=0.441158;SGB=-7.6637;VDB=0.0759392;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.10:2502834 chr10:002502834 0 W/2502834-2502834 FN3991-S SNP A -> T AC=1;AN=168;BQB=0.349358;DP=2475;DP4=926,1472,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.10595e-06;MQSB=0.996938;RPB=0.993696;SGB=-16.2342;VDB=0.648217;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.10:2531079 chr10:002531079 0 W/2531079-2531079 FN1320-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3738-S.SNP.10:2544820 chr10:002544820 0 W/2544820-2544820 FN3738-S SNP C -> A AC=1;AN=190;BQB=0.993909;DP=3216;DP4=1383,1726,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.72047e-06;MQSB=0.00161022;RPB=0.312521;SGB=53.6492;VDB=0.554252;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T2529|2535|LOC_Os10g05190|protein_coding|CODING|LOC_Os10g05190.1|10|1) FN3294-S.SNP.10:2555108 chr10:002555108 0 W/2555108-2555108 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.810346;DP=2612;DP4=1445,1071,18,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.82827e-09;MQSB=2.2214e-07;RPB=0.859261;SGB=74.4875;VDB=0.932088;EFF=UTR_5_PRIME(MODIFIER||199||388|LOC_Os10g05210|protein_coding|CODING|LOC_Os10g05210.1|2|1),UTR_5_PRIME(MODIFIER||547||252|LOC_Os10g05210|protein_coding|CODING|LOC_Os10g05210.3|2|1),UTR_5_PRIME(MODIFIER||199||368|LOC_Os10g05210|protein_coding|CODING|LOC_Os10g05210.2|2|1) FN986-S.SNP.10:2561649 chr10:002561649 0 W/2561649-2561649 FN986-S Single Base Substitution C-T INTRON HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3777-S.SNP.10:2563377 chr10:002563377 0 W/2563377-2563377 FN3777-S SNP T -> C AC=1;AN=190;BQB=0.996195;DP=2598;DP4=1390,1116,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.472e-06;MQSB=0.876322;RPB=0.883057;SGB=53.8699;VDB=0.383206;EFF=INTRON(MODIFIER||||396|LOC_Os10g05220|protein_coding|CODING|LOC_Os10g05220.1|9|1),INTRON(MODIFIER||||396|LOC_Os10g05220|protein_coding|CODING|LOC_Os10g05220.2|9|1) FN4173-S.SNP.10:2683660 chr10:002683660 0 W/2683660-2683660 FN4173-S SNP T -> C AC=2;AN=170;BQB=0.802659;DP=2656;DP4=1196,1292,11,11;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=1.20714e-08;MQSB=0.0192144;RPB=0.914199;SGB=65.8619;VDB=0.0884965;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y408|603|LOC_Os10g05440|protein_coding|CODING|LOC_Os10g05440.1|2|1) FN2462.SNP.10:2684557 chr10:002684557 0 W/2684557-2684557 FN2462 SNP T -> A AC=1;AN=200;BQB=0.834552;DP=4468;DP4=2203,2052,7,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.14453e-07;MQSB=0.0742931;RPB=0.706927;SGB=21.6694;VDB=0.191902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2272-S.SNP.10:2685307 chr10:002685307 0 W/2685307-2685307 FN2272-S SNP C -> T AC=1;AN=190;BQB=0.571399;DP=4019;DP4=1440,2221,15,17;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0;MQB=5.13221e-06;MQSB=0.227452;RPB=0.969628;SGB=140.173;VDB=0.645297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.10:2692699 chr10:002692699 0 W/2692699-2692699 FN2753-S SNP A -> G AC=1;AN=200;BQB=0.999654;DP=5037;DP4=2344,2471,10,16;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000198531;MQB=8.39592e-07;MQSB=0.972292;RPB=0.465843;SGB=114.132;VDB=0.336822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.10:2697057 chr10:002697057 0 W/2697057-2697057 FN2117-S SNP C -> T AC=1;AN=168;BQB=0.0406038;DP=4197;DP4=2080,2070,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.0299431;MQSB=0.0839045;RPB=0.684415;SGB=-14.9417;VDB=0.519536;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.10:2707179 chr10:002707179 0 W/2707179-2707179 FN2085-S SNP A -> C AC=1;AN=168;BQB=0.0067293;DP=4152;DP4=2195,1921,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.52677e-08;MQSB=0.997629;RPB=0.735056;SGB=-12.7876;VDB=0.736818;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.10:2707367 chr10:002707367 0 W/2707367-2707367 FN473-S Single Base Substitution T-C INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN2794-S.SNP.10:2709203 chr10:002709203 0 W/2709203-2709203 FN2794-S SNP A -> G AC=1;AN=198;BQB=0.328401;DP=4312;DP4=2474,1597,8,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.04361e-09;MQSB=0.717875;RPB=0.207926;SGB=-11.4553;VDB=0.548607;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M503T|515|LOC_Os10g05490|protein_coding|CODING|LOC_Os10g05490.1|2|1) FN4025-S.SNP.10:2713782 chr10:002713782 0 W/2713782-2713782 FN4025-S SNP T -> C AC=2;AN=168;BQB=0.507442;DP=2427;DP4=1085,1183,6,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.04725e-05;MQSB=0.949763;RPB=0.999826;SGB=51.902;VDB=0.491433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.10:2717132 chr10:002717132 0 W/2717132-2717132 FN1231-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g05500 OsFBX370 - F-box domain containing protein, expressed SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN427-S.SNP.10:2723309 chr10:002723309 0 W/2723309-2723309 FN427-S Single Base Substitution G-C INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1505-S.SNP.10:2724219 chr10:002724219 0 W/2724219-2724219 FN1505-S Single Base Substitution A-G INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1086-S.SNP.10:2724482 chr10:002724482 0 W/2724482-2724482 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN4201-S.SNP.10:2729817 chr10:002729817 0 W/2729817-2729817 FN4201-S SNP G -> C AC=1;AN=170;BQB=0.996216;DP=2414;DP4=1140,1096,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=9.40072e-05;MQSB=0.246262;RPB=0.0437615;SGB=7.67082;VDB=0.358583;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.10:2731554 chr10:002731554 0 W/2731554-2731554 FN2785-S SNP G -> C AC=1;AN=198;BQB=0.773548;DP=4089;DP4=2065,1782,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=0.00343804;MQSB=0.0655378;RPB=0.97515;SGB=21.559;VDB=0.808233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.10:2734711 chr10:002734711 0 W/2734711-2734711 FN2537-S SNP G -> C AC=1;AN=198;BQB=0.942533;DP=4206;DP4=2098,1906,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.77816e-06;MQSB=0.999124;RPB=0.815713;SGB=35.7638;VDB=0.227094;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.10:2734791 chr10:002734791 0 W/2734791-2734791 W7-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN1333-S.SNP.10:2735116 chr10:002735116 0 W/2735116-2735116 FN1333-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3515-S.SNP.10:2740971 chr10:002740971 0 W/2740971-2740971 FN3515-S SNP G -> C AC=1;AN=188;BQB=0.710017;DP=3383;DP4=1904,1409,15,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.37313e-10;MQSB=0.999388;RPB=0.8646;SGB=57.244;VDB=0.773639;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S275C|420|LOC_Os10g05530|protein_coding|CODING|LOC_Os10g05530.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S275C|379|LOC_Os10g05530|protein_coding|CODING|LOC_Os10g05530.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S275C|375|LOC_Os10g05530|protein_coding|CODING|LOC_Os10g05530.3|1|1) FN2106-S.SNP.10:2747133 chr10:002747133 0 W/2747133-2747133 FN2106-S SNP T -> C AC=2;AN=168;BQB=0.343756;DP=3641;DP4=1401,2169,24,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.66609e-22;MQSB=0.9798;RPB=0.872623;SGB=-121.42;VDB=0.181072;EFF=INTRON(MODIFIER||||378|LOC_Os10g05540|protein_coding|CODING|LOC_Os10g05540.1|1|1) FN4229-S.SNP.10:2747982 chr10:002747982 0 W/2747982-2747982 FN4229-S SNP A -> C AC=1;AN=170;BQB=0.992464;DP=2573;DP4=1261,1203,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.46839e-05;MQSB=0.781035;RPB=0.966404;SGB=34.5445;VDB=0.0472224;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L127W|378|LOC_Os10g05540|protein_coding|CODING|LOC_Os10g05540.1|1|1) FN3438-S.SNP.10:2751942 chr10:002751942 0 W/2751942-2751942 FN3438-S SNP C -> A AC=2;AN=184;BQB=0.617371;DP=3993;DP4=2171,1700,27,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.62111e-21;MQSB=0.338934;RPB=0.574989;SGB=155.489;VDB=0.766522;EFF=INTERGENIC(MODIFIER||||||||||1) FN796-S.SNP.10:2767119 chr10:002767119 0 W/2767119-2767119 FN796-S Single Base Substitution T-C INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2197-S.SNP.10:2772990 chr10:002772990 0 W/2772990-2772990 FN2197-S SNP T -> C AC=1;AN=190;BQB=0.963238;DP=4983;DP4=2474,2239,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.56842e-10;MQSB=0.552903;RPB=0.868962;SGB=36.4291;VDB=0.419867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.10:2773709 chr10:002773709 0 W/2773709-2773709 FN3577-S SNP A -> G AC=2;AN=188;BQB=0.784026;DP=3143;DP4=1662,1364,22,22;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0;MQB=2.64884e-16;MQSB=0.647046;RPB=0.976263;SGB=145.826;VDB=0.135087;EFF=INTRON(MODIFIER||||225|LOC_Os10g05580|protein_coding|CODING|LOC_Os10g05580.1|1|1) FN1749-S.SNP.10:2777775 chr10:002777775 0 W/2777775-2777775 FN1749-S SNP C -> A AC=1;AN=188;BQB=0.50499;DP=2978;DP4=1184,1751,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000355619;MQSB=0.882376;RPB=0.569696;SGB=-33.2542;VDB=0.292426;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.10:2779078 chr10:002779078 0 W/2779078-2779078 FN591-S Single Base Substitution C-T INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN-250.SNP.10:2788113 chr10:002788113 0 W/2788113-2788113 FN-250 Single Base Substitution C-T INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1755-S.SNP.10:2788873 chr10:002788873 0 W/2788873-2788873 FN1755-S SNP G -> A AC=1;AN=188;BQB=0.995892;DP=3850;DP4=1586,2225,17,13;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=5.0067e-08;MQSB=0.351133;RPB=0.882394;SGB=27.1443;VDB=0.254033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1117-S.SNP.10:2794609 chr10:002794609 0 W/2794609-2794609 FN1117-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3877-S.SNP.10:2794733 chr10:002794733 0 W/2794733-2794733 FN3877-S SNP C -> A AC=1;AN=158;BQB=0.884914;DP=2340;DP4=1312,930,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.72656e-07;MQSB=0.932016;RPB=0.970363;SGB=37.4429;VDB=0.291443;EFF=UTR_3_PRIME(MODIFIER||93||389|LOC_Os10g05600|protein_coding|CODING|LOC_Os10g05600.1|3|1) FN3448-S.SNP.10:2796193 chr10:002796193 0 W/2796193-2796193 FN3448-S SNP C -> A AC=1;AN=184;BQB=0.987683;DP=2419;DP4=1330,1001,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.26352e-05;MQSB=0.738465;RPB=0.709515;SGB=21.6609;VDB=0.18406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A66S|389|LOC_Os10g05600|protein_coding|CODING|LOC_Os10g05600.1|2|1) FN1472-S.SNP.10:2799688 chr10:002799688 0 W/2799688-2799688 FN1472-S Single Base Substitution G-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN1216-S.SNP.10:2800486 chr10:002800486 0 W/2800486-2800486 FN1216-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1411-S.SNP.10:2803077 chr10:002803077 0 W/2803077-2803077 FN1411-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN1339-S.SNP.10:2804572 chr10:002804572 0 W/2804572-2804572 FN1339-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g05620 transposon protein, putative, unclassified, expressed SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN_769-4-1.SNP.10:2814692 chr10:002814692 0 W/2814692-2814692 FN_769-4-1 Single Base Substitution T-C HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN2619-S.SNP.10:2818631 chr10:002818631 0 W/2818631-2818631 FN2619-S SNP T -> A AC=1;AN=198;BQB=0.806469;DP=3981;DP4=1856,1930,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00527506;MQB=8.27955e-07;MQSB=5.38714e-06;RPB=0.487824;SGB=118.476;VDB=0.98977;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K181*|841|LOC_Os10g05650|protein_coding|CODING|LOC_Os10g05650.1|4|1);LOF=(LOC_Os10g05650|LOC_Os10g05650|1|1.00);NMD=(LOC_Os10g05650|LOC_Os10g05650|1|1.00) FN4247-S.SNP.10:2823002 chr10:002823002 0 W/2823002-2823002 FN4247-S SNP G -> A AC=2;AN=170;BQB=0.994978;DP=2174;DP4=1063,1021,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.59514e-13;MQSB=0.951523;RPB=0.329894;SGB=44.3104;VDB=0.437074;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.10:2824344 chr10:002824344 0 W/2824344-2824344 FN-217 Single Base Substitution T-C INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2607-S.SNP.10:2829243 chr10:002829243 0 W/2829243-2829243 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.995867;DP=3943;DP4=1847,1923,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000276681;MQSB=0.394018;RPB=0.96828;SGB=18.5788;VDB=0.836076;EFF=START_GAINED(LOW||||325|LOC_Os10g05660|protein_coding|CODING|LOC_Os10g05660.1|1|1),UTR_5_PRIME(MODIFIER||19||325|LOC_Os10g05660|protein_coding|CODING|LOC_Os10g05660.1|1|1) FN1323-S.SNP.10:2829309 chr10:002829309 0 W/2829309-2829309 FN1323-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1255-S.SNP.10:2833367 chr10:002833367 0 W/2833367-2833367 FN1255-S Single Base Substitution G-A INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN951-S.SNP.10:2835352 chr10:002835352 0 W/2835352-2835352 FN951-S Single Base Substitution G-A INTERGENIC HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2756-S.SNP.10:2837559 chr10:002837559 0 W/2837559-2837559 FN2756-S SNP C -> A AC=1;AN=200;BQB=0.71944;DP=4397;DP4=2474,1712,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.97782e-07;MQSB=0.257349;RPB=0.929392;SGB=47.4799;VDB=0.0929623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.10:2858134 chr10:002858134 0 W/2858134-2858134 FN2269-S SNP C -> G AC=2;AN=190;BQB=0.996624;DP=4525;DP4=2201,1822,23,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.29113e-24;MQSB=0.999332;RPB=0.982983;SGB=4.50208;VDB=0.971751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1583-S.SNP.10:2864433 chr10:002864433 0 W/2864433-2864433 FN1583-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1231-S.SNP.10:2884701 chr10:002884701 0 W/2884701-2884701 FN1231-S Single Base Substitution C-G INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN2243-S.SNP.10:2887125 chr10:002887125 0 W/2887125-2887125 FN2243-S SNP T -> G AC=1;AN=190;BQB=0.0586563;DP=4956;DP4=2335,2422,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.44303e-11;MQSB=0.922362;RPB=0.586449;SGB=22.7576;VDB=0.16048;EFF=INTRON(MODIFIER||||660|LOC_Os10g05730|protein_coding|CODING|LOC_Os10g05730.1|1|1) FN2408.SNP.10:2887557 chr10:002887557 0 W/2887557-2887557 FN2408 SNP A -> G AC=1;AN=200;BQB=0.944014;DP=4907;DP4=2310,2204,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.87564e-05;MQSB=0.706008;RPB=0.272582;SGB=29.4541;VDB=0.528324;EFF=UTR_3_PRIME(MODIFIER||57||660|LOC_Os10g05730|protein_coding|CODING|LOC_Os10g05730.2|1|1),INTRON(MODIFIER||||660|LOC_Os10g05730|protein_coding|CODING|LOC_Os10g05730.1|1|1) FN-187.SNP.10:2892162 chr10:002892162 0 W/2892162-2892162 FN-187 Single Base Substitution C-G INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3509-S.SNP.10:2892358 chr10:002892358 0 W/2892358-2892358 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.50378;DP=2748;DP4=1111,1530,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.47086e-07;MQSB=0.955594;RPB=0.907492;SGB=67.1521;VDB=0.254916;EFF=INTERGENIC(MODIFIER||||||||||1) FN1543-S.SNP.10:2895590 chr10:002895590 0 W/2895590-2895590 FN1543-S Single Base Substitution G-A INTRON Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. W427-1-1.SNP.10:2904325 chr10:002904325 0 W/2904325-2904325 W427-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN972-S.SNP.10:2919652 chr10:002919652 0 W/2919652-2919652 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN689-S.SNP.10:2938924 chr10:002938924 0 W/2938924-2938924 FN689-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g05810 transposon protein, putative, Mutator sub-class, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN4234-S.SNP.10:2940067 chr10:002940067 0 W/2940067-2940067 FN4234-S SNP A -> G AC=2;AN=170;BQB=0.955916;DP=2616;DP4=1118,1384,9,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.12839e-11;MQSB=0.999622;RPB=0.957843;SGB=58.9766;VDB=0.0619604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.10:2951840 chr10:002951840 0 W/2951840-2951840 FN2128-S SNP G -> A AC=1;AN=168;BQB=0.119798;DP=7846;DP4=3946,3848,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.40267e-12;MQSB=0.923634;RPB=0.999605;SGB=-42.3508;VDB=0.556932;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.10:2952541 chr10:002952541 0 W/2952541-2952541 FN3760-S SNP A -> T AC=1;AN=190;BQB=0.746975;DP=4506;DP4=2386,2000,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.43121e-13;MQSB=0.995178;RPB=0.691903;SGB=82.301;VDB=0.284417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.10:2957920 chr10:002957920 0 W/2957920-2957920 FN2085-S SNP A -> G AC=1;AN=168;BQB=0.150405;DP=4882;DP4=1818,3022,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00327735;MQB=0.0793525;MQSB=0.148678;RPB=0.884695;SGB=-37.7974;VDB=0.331828;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.10:2961883 chr10:002961883 0 W/2961883-2961883 FN948-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g05870 retrotransposon protein, putative, unclassified SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN948-S.SNP.10:2961885 chr10:002961885 0 W/2961885-2961885 FN948-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2648-S.SNP.10:2972382 chr10:002972382 0 W/2972382-2972382 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.864128;DP=4582;DP4=2271,2050,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55852e-08;MQSB=0.925157;RPB=0.916003;SGB=36.6644;VDB=0.615726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D33N|195|LOC_Os10g05890|protein_coding|CODING|LOC_Os10g05890.1|1|1) FN2231-S.SNP.10:2985588 chr10:002985588 0 W/2985588-2985588 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.976279;DP=4999;DP4=2437,2207,15,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020004;MQB=3.94209e-15;MQSB=0.647066;RPB=0.993941;SGB=-7.68321;VDB=0.931502;EFF=INTERGENIC(MODIFIER||||||||||1) FN626-S.SNP.10:2988250 chr10:002988250 0 W/2988250-2988250 FN626-S Single Base Substitution A-C INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3541-S.SNP.10:2989728 chr10:002989728 0 W/2989728-2989728 FN3541-S SNP T -> A AC=2;AN=188;BQB=0.942069;DP=2590;DP4=1282,1243,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.50084e-13;MQSB=0.951935;RPB=0.999758;SGB=94.4119;VDB=0.339736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.10:2990882 chr10:002990882 0 W/2990882-2990882 FN2251-S SNP G -> T AC=1;AN=190;BQB=0.014139;DP=4439;DP4=2105,2096,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000225276;MQB=0.00236732;MQSB=0.796891;RPB=0.126871;SGB=25.439;VDB=0.446641;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.10:2993836 chr10:002993836 0 W/2993836-2993836 FN4047-S SNP G -> A AC=1;AN=168;BQB=0.706938;DP=2236;DP4=1467,651,13,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86356e-06;MQSB=0.422927;RPB=0.646968;SGB=4.1907;VDB=0.112371;EFF=INTERGENIC(MODIFIER||||||||||1) FN3488-S.SNP.10:2994073 chr10:002994073 0 W/2994073-2994073 FN3488-S SNP G -> C AC=1;AN=184;BQB=0.823191;DP=2381;DP4=1079,1239,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.7385e-07;MQSB=0.823287;RPB=0.609407;SGB=28.7043;VDB=0.746774;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.10:2999061 chr10:002999061 0 W/2999061-2999061 FN1211-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3500-S.SNP.10:2999077 chr10:002999077 0 W/2999077-2999077 FN3500-S SNP T -> C AC=1;AN=188;BQB=0.941241;DP=2806;DP4=1330,1369,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.89176e-10;MQSB=0.924386;RPB=0.611446;SGB=46.6141;VDB=0.849685;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.10:3002301 chr10:003002301 0 W/3002301-3002301 FN4155-S SNP T -> C AC=1;AN=170;BQB=0.935696;DP=2768;DP4=1376,1275,10,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.17721e-11;MQSB=0.941016;RPB=0.697832;SGB=74.528;VDB=0.881224;EFF=INTERGENIC(MODIFIER||||||||||1) FN-275.SNP.10:3002682 chr10:003002682 0 W/3002682-3002682 FN-275 Single Base Substitution A-C INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2691-S.SNP.10:3008738 chr10:003008738 0 W/3008738-3008738 FN2691-S SNP T -> G AC=1;AN=200;BQB=0.599878;DP=5268;DP4=2548,2498,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.31172e-13;MQSB=0.999774;RPB=0.852567;SGB=12.7003;VDB=0.191834;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.10:3014143 chr10:003014143 0 W/3014143-3014143 W598-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. W598-2-1.SNP.10:3014152 chr10:003014152 0 W/3014152-3014152 W598-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2477.SNP.10:3014714 chr10:003014714 0 W/3014714-3014714 FN2477 SNP G -> A AC=2;AN=200;BQB=0.972543;DP=3620;DP4=1589,1760,16,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25662e-15;MQSB=4.25849e-05;RPB=0.749603;SGB=164.789;VDB=0.374202;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.10:3018309 chr10:003018309 0 W/3018309-3018309 FN3332-S SNP T -> A AC=2;AN=184;BQB=0.977064;DP=2650;DP4=1374,1180,8,3;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.19315e-07;MQSB=0.998284;RPB=0.914069;SGB=44.2207;VDB=0.265497;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.10:3018370 chr10:003018370 0 W/3018370-3018370 FN948-S Single Base Substitution G-A INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN1477-S.SNP.10:3023243 chr10:003023243 0 W/3023243-3023243 FN1477-S Single Base Substitution C-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN689-S.SNP.10:3023243 chr10:003023243 0 W/3023243-3023243 FN689-S Single Base Substitution C-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3500-S.SNP.10:3023854 chr10:003023854 0 W/3023854-3023854 FN3500-S SNP C -> A AC=1;AN=188;BQB=0.999588;DP=3687;DP4=2548,1058,14,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.38046e-09;MQSB=0.627558;RPB=0.842277;SGB=71.6954;VDB=0.470811;EFF=INTERGENIC(MODIFIER||||||||||1) FN540-S.SNP.10:3025522 chr10:003025522 0 W/3025522-3025522 FN540-S Single Base Substitution C-T INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN540-S.SNP.10:3025525 chr10:003025525 0 W/3025525-3025525 FN540-S Single Base Substitution C-A INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN-107.SNP.10:3026808 chr10:003026808 0 W/3026808-3026808 FN-107 Single Base Substitution C-T INTERGENIC HOMO SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN3885-S.SNP.10:3028995 chr10:003028995 0 W/3028995-3028995 FN3885-S SNP T -> C AC=2;AN=158;BQB=0.795421;DP=2495;DP4=1181,1197,9,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.51155e-14;MQSB=0.750632;RPB=0.32278;SGB=64.3985;VDB=0.293352;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.10:3030801 chr10:003030801 0 W/3030801-3030801 FN706-S Single Base Substitution A-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3412-S.SNP.10:3033995 chr10:003033995 0 W/3033995-3033995 FN3412-S SNP T -> C AC=1;AN=184;BQB=0.676642;DP=2940;DP4=1600,1162,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30675e-05;MQSB=0.963761;RPB=0.629207;SGB=20.7533;VDB=0.767408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.10:3036209 chr10:003036209 0 W/3036209-3036209 FN1381-S Single Base Substitution C-A INTERGENIC HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2326.SNP.10:3037547 chr10:003037547 0 W/3037547-3037547 FN2326 SNP A -> G AC=1;AN=192;BQB=0.72245;DP=5102;DP4=2055,2753,14,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.18267e-16;MQSB=0.973895;RPB=0.765868;SGB=89.6809;VDB=0.229665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.10:3053471 chr10:003053471 0 W/3053471-3053471 FN2374 SNP G -> C AC=1;AN=192;BQB=0.999994;DP=4840;DP4=2381,2090,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000524154;MQSB=0.94174;RPB=0.925729;SGB=13.5279;VDB=0.93451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.10:3058105 chr10:003058105 0 W/3058105-3058105 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.787087;DP=3035;DP4=1282,1567,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.72976e-09;MQSB=0.940009;RPB=0.958303;SGB=39.5276;VDB=0.135433;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.10:3059229 chr10:003059229 0 W/3059229-3059229 FN475-S Single Base Substitution G-A INTERGENIC HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN2239-S.SNP.10:3064439 chr10:003064439 0 W/3064439-3064439 FN2239-S SNP G -> A AC=1;AN=190;BQB=0.986078;DP=4639;DP4=2220,2132,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34091e-08;MQSB=0.416947;RPB=0.59678;SGB=21.1058;VDB=0.474445;EFF=INTRON(MODIFIER||||693|LOC_Os10g06030|protein_coding|CODING|LOC_Os10g06030.1|2|1) FN500-S.SNP.10:3068228 chr10:003068228 0 W/3068228-3068228 FN500-S Single Base Substitution C-G INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1042-S.SNP.10:3069754 chr10:003069754 0 W/3069754-3069754 FN1042-S Single Base Substitution T-C INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN-154.SNP.10:3071012 chr10:003071012 0 W/3071012-3071012 FN-154 Single Base Substitution T-G INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN3353-S.SNP.10:3077994 chr10:003077994 0 W/3077994-3077994 FN3353-S SNP C -> A AC=1;AN=184;BQB=0.992181;DP=2223;DP4=1055,1057,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000169126;MQSB=2.26909e-07;RPB=0.994418;SGB=26.1347;VDB=0.925297;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.10:3077997 chr10:003077997 0 W/3077997-3077997 FN3353-S SNP C -> A AC=1;AN=184;BQB=0.818649;DP=2202;DP4=1011,1064,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000176243;MQSB=2.53839e-06;RPB=0.997538;SGB=26.1347;VDB=0.925297;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.10:3078136 chr10:003078136 0 W/3078136-3078136 FN1346-S Single Base Substitution T-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1346-S.SNP.10:3078137 chr10:003078137 0 W/3078137-3078137 FN1346-S Single Base Substitution C-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3959-S.SNP.10:3080209 chr10:003080209 0 W/3080209-3080209 FN3959-S SNP A -> G AC=1;AN=168;BQB=0.928721;DP=2480;DP4=1034,1339,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.11422e-06;MQSB=0.963517;RPB=0.556571;SGB=24.4556;VDB=0.288338;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L480|518|LOC_Os10g06070|protein_coding|CODING|LOC_Os10g06070.1|2|1) FN537-S.SNP.10:3089623 chr10:003089623 0 W/3089623-3089623 FN537-S Single Base Substitution G-A INTERGENIC HET SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN3824-S.SNP.10:3093323 chr10:003093323 0 W/3093323-3093323 FN3824-S SNP C -> A AC=1;AN=190;BQB=0.991218;DP=2191;DP4=1133,977,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34054e-06;MQSB=0.724862;RPB=0.959901;SGB=25.439;VDB=0.97674;EFF=INTRON(MODIFIER||||748|LOC_Os10g06090|protein_coding|CODING|LOC_Os10g06090.1|2|1) FN2089-S.SNP.10:3100805 chr10:003100805 0 W/3100805-3100805 FN2089-S SNP C -> A AC=2;AN=168;BQB=0.660735;DP=1961;DP4=1300,607,22,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.16092e-12;MQSB=0.993732;RPB=0.22213;SGB=-8.47945;VDB=0.662681;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.10:3103059 chr10:003103059 0 W/3103059-3103059 FN806-S Single Base Substitution A-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1740-S.SNP.10:3124202 chr10:003124202 0 W/3124202-3124202 FN1740-S SNP G -> A AC=1;AN=188;BQB=0.323908;DP=3958;DP4=1880,2050,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.23898e-06;MQSB=0.965504;RPB=0.641621;SGB=-12.8266;VDB=0.921786;EFF=INTRON(MODIFIER||||695|LOC_Os10g06140|protein_coding|CODING|LOC_Os10g06140.1|1|1) FN-371.SNP.10:3133473 chr10:003133473 0 W/3133473-3133473 FN-371 Single Base Substitution T-C INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3436-S.SNP.10:3133576 chr10:003133576 0 W/3133576-3133576 FN3436-S SNP G -> A AC=1;AN=184;BQB=0.889254;DP=2687;DP4=1392,1201,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78077e-08;MQSB=0.924804;RPB=0.814232;SGB=28.3187;VDB=0.364637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.10:3134328 chr10:003134328 0 W/3134328-3134328 FN1033-S Single Base Substitution A-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2306.SNP.10:3138978 chr10:003138978 0 W/3138978-3138978 FN2306 SNP C -> T AC=2;AN=192;BQB=0.870044;DP=4913;DP4=2128,2357,5,5;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.03622e-06;MQSB=0.86443;RPB=0.174249;SGB=10.9636;VDB=0.170536;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.10:3140457 chr10:003140457 0 W/3140457-3140457 FN3332-S SNP A -> G AC=1;AN=184;BQB=0.88115;DP=3049;DP4=1577,1329,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.01167e-07;MQSB=0.992124;RPB=0.389043;SGB=28.7043;VDB=0.431135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.10:3149683 chr10:003149683 0 W/3149683-3149683 FN2599-S SNP C -> T AC=2;AN=198;BQB=0.874463;DP=4371;DP4=2171,1941,28,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.06716e-25;MQSB=0.876288;RPB=0.811325;SGB=151.598;VDB=0.779028;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.10:3158239 chr10:003158239 0 W/3158239-3158239 FN1528-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g06170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN3780-S.SNP.10:3158462 chr10:003158462 0 W/3158462-3158462 FN3780-S SNP T -> A AC=1;AN=190;BQB=0.986308;DP=3589;DP4=1611,1851,4,14;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0111452;MQB=6.10512e-08;MQSB=0.263151;RPB=0.879036;SGB=53.8699;VDB=0.562568;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V811E|1788|LOC_Os10g06170|protein_coding|CODING|LOC_Os10g06170.1|3|1) FN3772-S.SNP.10:3162401 chr10:003162401 0 W/3162401-3162401 FN3772-S SNP G -> A AC=1;AN=190;BQB=0.987846;DP=2293;DP4=1099,1081,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00130833;MQB=5.44833e-05;MQSB=0.905119;RPB=0.700308;SGB=39.9877;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.10:3166337 chr10:003166337 0 W/3166337-3166337 FN1024-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1040-S.SNP.10:3168718 chr10:003168718 0 W/3168718-3168718 FN1040-S Single Base Substitution C-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1031-S.SNP.10:3169012 chr10:003169012 0 W/3169012-3169012 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1431-S.SNP.10:3169855 chr10:003169855 0 W/3169855-3169855 FN1431-S Single Base Substitution G-T INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN3579-S.SNP.10:3173259 chr10:003173259 0 W/3173259-3173259 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.996291;DP=3194;DP4=1887,1242,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.78124e-11;MQSB=0.999999;RPB=0.294972;SGB=80.782;VDB=0.29002;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.10:3176816 chr10:003176816 0 W/3176816-3176816 FN-64 Single Base Substitution C-T INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN1450-S.SNP.10:3176816 chr10:003176816 0 W/3176816-3176816 FN1450-S Single Base Substitution C-T INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3431-S.SNP.10:3176816 chr10:003176816 0 W/3176816-3176816 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.977361;DP=3770;DP4=1802,1878,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60584e-05;MQSB=0.891831;RPB=0.604166;SGB=39.699;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.10:3176816 chr10:003176816 0 W/3176816-3176816 FN731-S Single Base Substitution C-T INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN-382.SNP.10:3177977 chr10:003177977 0 W/3177977-3177977 FN-382 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN1696-S.SNP.10:3183612 chr10:003183612 0 W/3183612-3183612 FN1696-S SNP C -> A AC=1;AN=188;BQB=0.177598;DP=1930;DP4=991,889,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00941836;MQSB=0.989547;RPB=0.937673;SGB=10.8165;VDB=0.372756;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E318*|824|LOC_Os10g06200|protein_coding|CODING|LOC_Os10g06200.1|3|1);LOF=(LOC_Os10g06200|LOC_Os10g06200|1|1.00);NMD=(LOC_Os10g06200|LOC_Os10g06200|1|1.00) FN835-S.SNP.10:3192086 chr10:003192086 0 W/3192086-3192086 FN835-S Single Base Substitution G-A INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN-78.SNP.10:3192187 chr10:003192187 0 W/3192187-3192187 FN-78 Single Base Substitution G-T INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN933-S.SNP.10:3192187 chr10:003192187 0 W/3192187-3192187 FN933-S Single Base Substitution G-T INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1349-S.SNP.10:3197149 chr10:003197149 0 W/3197149-3197149 FN1349-S Single Base Substitution G-A INTRON HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN3478-S.SNP.10:3198498 chr10:003198498 0 W/3198498-3198498 FN3478-S SNP C -> G AC=2;AN=184;BQB=0.841795;DP=3358;DP4=1488,1758,20,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.82697e-24;MQSB=0.259996;RPB=0.769228;SGB=175.352;VDB=0.122061;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.10:3201152 chr10:003201152 0 W/3201152-3201152 FN4187-S SNP C -> T AC=2;AN=170;BQB=0.970468;DP=2579;DP4=1066,1415,9,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000387747;MQB=1.2977e-16;MQSB=0.800031;RPB=0.514525;SGB=93.4031;VDB=0.822719;EFF=INTRON(MODIFIER||||190|LOC_Os10g06240|protein_coding|CODING|LOC_Os10g06240.1|2|1) FN1742-S.SNP.10:3201738 chr10:003201738 0 W/3201738-3201738 FN1742-S SNP T -> A AC=1;AN=188;BQB=0.978741;DP=2358;DP4=1033,1291,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00254453;MQB=0.00181093;MQSB=9.17447e-08;RPB=0.880479;SGB=23.5329;VDB=0.559804;EFF=INTRON(MODIFIER||||190|LOC_Os10g06240|protein_coding|CODING|LOC_Os10g06240.1|2|1) FN883-S.SNP.10:3204817 chr10:003204817 0 W/3204817-3204817 FN883-S Single Base Substitution T-G INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN369-S.SNP.10:3206423 chr10:003206423 0 W/3206423-3206423 FN369-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g06250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN439-S.SNP.10:3206804 chr10:003206804 0 W/3206804-3206804 FN439-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g06250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN813-S.SNP.10:3207169 chr10:003207169 0 W/3207169-3207169 FN813-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g06250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN2681-S.SNP.10:3208613 chr10:003208613 0 W/3208613-3208613 FN2681-S SNP G -> C AC=2;AN=200;BQB=0.664875;DP=4823;DP4=2273,2276,31,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00020734;MQB=4.74493e-33;MQSB=0.83323;RPB=0.87606;SGB=144.112;VDB=0.251493;EFF=INTRON(MODIFIER||||333|LOC_Os10g06260|protein_coding|CODING|LOC_Os10g06260.1|1|1) FN3757-S.SNP.10:3208613 chr10:003208613 0 W/3208613-3208613 FN3757-S SNP G -> C AC=2;AN=190;BQB=0.92143;DP=2628;DP4=1245,1284,14,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.05869e-18;MQSB=0.987177;RPB=0.813437;SGB=149.281;VDB=0.467262;EFF=INTRON(MODIFIER||||333|LOC_Os10g06260|protein_coding|CODING|LOC_Os10g06260.1|1|1) FN1034-S.SNP.10:3216749 chr10:003216749 0 W/3216749-3216749 FN1034-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN3540-S.SNP.10:3216749 chr10:003216749 0 W/3216749-3216749 FN3540-S SNP C -> T AC=1;AN=188;BQB=0.966014;DP=3118;DP4=1453,1613,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.11064e-08;MQSB=0.992778;RPB=0.745298;SGB=58.0655;VDB=0.663114;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1079|1719|LOC_Os10g06270|protein_coding|CODING|LOC_Os10g06270.1|3|1) FN3710-S.SNP.10:3218192 chr10:003218192 0 W/3218192-3218192 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.30937;DP=3794;DP4=1727,1903,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0455983;MQB=0.415324;MQSB=0.577022;RPB=0.311923;SGB=28.9731;VDB=0.627329;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1511|1719|LOC_Os10g06270|protein_coding|CODING|LOC_Os10g06270.1|4|1) FN3376-S.SNP.10:3221359 chr10:003221359 0 W/3221359-3221359 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.889813;DP=3858;DP4=1637,2094,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.14282;MQB=0.279641;MQSB=0;RPB=0.984329;SGB=60.4004;VDB=0.976514;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.10:3223204 chr10:003223204 0 W/3223204-3223204 FN1716-S SNP C -> T AC=1;AN=188;BQB=0.146207;DP=2000;DP4=1159,790,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.15602e-07;MQSB=0.268767;RPB=0.684411;SGB=7.0815;VDB=0.473206;EFF=INTERGENIC(MODIFIER||||||||||1) FN1711-S.SNP.10:3227548 chr10:003227548 0 W/3227548-3227548 FN1711-S SNP G -> T AC=1;AN=188;BQB=0.121995;DP=1892;DP4=1151,686,17,4;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.0544397;MQB=0.900286;MQSB=0.000118549;RPB=0.196566;SGB=-12.2833;VDB=0.533337;EFF=INTRON(MODIFIER||||1786|LOC_Os10g06290|protein_coding|CODING|LOC_Os10g06290.1|2|1) FN-284.SNP.10:3230269 chr10:003230269 0 W/3230269-3230269 FN-284 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN2249-S.SNP.10:3230569 chr10:003230569 0 W/3230569-3230569 FN2249-S SNP C -> G AC=1;AN=190;BQB=0.953813;DP=4893;DP4=2392,2170,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204374;MQB=1.08497e-05;MQSB=0.927191;RPB=0.883731;SGB=13.4442;VDB=0.697088;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I1219M|1786|LOC_Os10g06290|protein_coding|CODING|LOC_Os10g06290.1|3|1) FN3725-S.SNP.10:3231683 chr10:003231683 0 W/3231683-3231683 FN3725-S SNP G -> A AC=1;AN=190;BQB=0.908224;DP=3083;DP4=1540,1439,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0107039;MQB=1.64082e-06;MQSB=0.00929801;RPB=0.929602;SGB=28.9929;VDB=0.0862643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1591R|1786|LOC_Os10g06290|protein_coding|CODING|LOC_Os10g06290.1|3|1) FN3767-S.SNP.10:3240148 chr10:003240148 0 W/3240148-3240148 FN3767-S SNP G -> T AC=1;AN=190;BQB=0.999968;DP=2905;DP4=1464,1345,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000688468;MQB=1.77819e-06;MQSB=0.809768;RPB=0.950188;SGB=58.2031;VDB=0.309523;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||261|LOC_Os10g06300|protein_coding|CODING|LOC_Os10g06300.1|2|1),INTRON(MODIFIER||||261|LOC_Os10g06300|protein_coding|CODING|LOC_Os10g06300.1|1|1);LOF=(LOC_Os10g06300|LOC_Os10g06300|1|1.00) FN-226.SNP.10:3244342 chr10:003244342 0 W/3244342-3244342 FN-226 Single Base Substitution C-T INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2392.SNP.10:3250728 chr10:003250728 0 W/3250728-3250728 FN2392 SNP T -> A AC=1;AN=200;BQB=0.608308;DP=4483;DP4=2089,2139,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223065;MQB=2.20333e-13;MQSB=0.93036;RPB=0.434103;SGB=25.5416;VDB=0.38238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L809Q|1730|LOC_Os10g06310|protein_coding|CODING|LOC_Os10g06310.1|5|1) FN2190-S.SNP.10:3251317 chr10:003251317 0 W/3251317-3251317 FN2190-S SNP T -> G AC=1;AN=190;BQB=0.909729;DP=5100;DP4=2451,2357,13,20;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00254902;MQB=2.92732e-15;MQSB=0.988064;RPB=0.951201;SGB=69.6295;VDB=0.816966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tGt|F979C|1730|LOC_Os10g06310|protein_coding|CODING|LOC_Os10g06310.1|6|1) FN1374-S.SNP.10:3252995 chr10:003252995 0 W/3252995-3252995 FN1374-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2651-S.SNP.10:3252995 chr10:003252995 0 W/3252995-3252995 FN2651-S SNP T -> A AC=2;AN=200;BQB=0.666593;DP=4982;DP4=2375,2327,27,25;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.0102369;MQB=0.0239177;MQSB=0.58229;RPB=0.970083;SGB=120.666;VDB=0.599918;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A1462|1730|LOC_Os10g06310|protein_coding|CODING|LOC_Os10g06310.1|8|1) FN2481.SNP.10:3253818 chr10:003253818 0 W/3253818-3253818 FN2481 SNP C -> G AC=1;AN=200;BQB=0.315733;DP=4729;DP4=1700,2644,8,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0038063;MQB=0.00557554;MQSB=1.63238e-13;RPB=0.481017;SGB=65.5058;VDB=0.172044;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.10:3258000 chr10:003258000 0 W/3258000-3258000 FN776-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g06330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1374-S.SNP.10:3262329 chr10:003262329 0 W/3262329-3262329 FN1374-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g06330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN2200-S.SNP.10:3278949 chr10:003278949 0 W/3278949-3278949 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.137649;DP=4729;DP4=2125,2258,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.122436;MQB=0.784922;MQSB=8.32101e-28;RPB=0.999658;SGB=57.4238;VDB=0.430195;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R290C|413|LOC_Os10g06370|protein_coding|CODING|LOC_Os10g06370.1|1|1) FN2113-S.SNP.10:3298675 chr10:003298675 0 W/3298675-3298675 FN2113-S SNP G -> A AC=2;AN=168;BQB=0.772633;DP=2799;DP4=1335,1390,12,20;HOB=0.0235261;ICB=0.494119;MQ=35;MQ0F=0.0635941;MQB=0.501973;MQSB=0.000741744;RPB=0.850735;SGB=-82.1908;VDB=0.844829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.10:3299296 chr10:003299296 0 W/3299296-3299296 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.814481;DP=2201;DP4=956,1184,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.19267e-11;MQSB=0.969642;RPB=0.27318;SGB=51.902;VDB=0.868704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R122H|191|LOC_Os10g06420|protein_coding|CODING|LOC_Os10g06420.1|1|1) FN3709-S.SNP.10:3302665 chr10:003302665 0 W/3302665-3302665 FN3709-S SNP C -> T AC=2;AN=190;BQB=0.999986;DP=2733;DP4=1397,1245,7,11;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00182949;MQB=1.93098e-06;MQSB=0.219801;RPB=0.476599;SGB=53.8699;VDB=0.5892;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R945|1569|LOC_Os10g06430|protein_coding|CODING|LOC_Os10g06430.1|6|1) FN810-S.SNP.10:3303444 chr10:003303444 0 W/3303444-3303444 FN810-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g06430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN810-S.SNP.10:3303451 chr10:003303451 0 W/3303451-3303451 FN810-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN-223.SNP.10:3305615 chr10:003305615 0 W/3305615-3305615 FN-223 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN1002-S.SNP.10:3308080 chr10:003308080 0 W/3308080-3308080 FN1002-S Single Base Substitution C-T INTERGENIC HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN-287.SNP.10:3308685 chr10:003308685 0 W/3308685-3308685 FN-287 Single Base Substitution C-G INTERGENIC HOMO SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2255-S.SNP.10:3308685 chr10:003308685 0 W/3308685-3308685 FN2255-S SNP C -> G AC=2;AN=190;BQB=0.561981;DP=5112;DP4=2367,2382,22,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00117371;MQB=3.25721e-16;MQSB=0.0464074;RPB=0.32164;SGB=-4.91383;VDB=0.345665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.10:3308685 chr10:003308685 0 W/3308685-3308685 FN2289 SNP C -> G AC=2;AN=192;BQB=0.851752;DP=5096;DP4=2350,2370,28,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00137363;MQB=2.7638e-26;MQSB=0.0495112;RPB=0.823233;SGB=7.80525;VDB=0.0367075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.10:3308970 chr10:003308970 0 W/3308970-3308970 FN2583-S SNP G -> A AC=1;AN=200;BQB=0.983291;DP=4778;DP4=2194,2226,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00125576;MQB=1.11046e-12;MQSB=0.969531;RPB=0.676463;SGB=83.5316;VDB=0.33426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.10:3322159 chr10:003322159 0 W/3322159-3322159 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.402949;DP=4649;DP4=2234,2047,72,69;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0705528;MQB=0;MQSB=7.91511e-10;RPB=0.999988;SGB=-2902;VDB=0.0010064;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1514|1859|LOC_Os10g06450|protein_coding|CODING|LOC_Os10g06450.1|4|1) FN3280-S.SNP.10:3323083 chr10:003323083 0 W/3323083-3323083 FN3280-S SNP G -> C AC=1;AN=184;BQB=0.995505;DP=3181;DP4=1261,1828,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.012889;MQB=1.4009e-07;MQSB=0.927822;RPB=0.99425;SGB=71.3514;VDB=0.326204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q1822H|1859|LOC_Os10g06450|protein_coding|CODING|LOC_Os10g06450.1|4|1) FN1275-S.SNP.10:3323948 chr10:003323948 0 W/3323948-3323948 FN1275-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2725-S.SNP.10:3328261 chr10:003328261 0 W/3328261-3328261 FN2725-S SNP G -> C AC=2;AN=200;BQB=0.225737;DP=5179;DP4=2458,2425,10,23;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00231705;MQB=1.8508e-07;MQSB=0.0869449;RPB=0.0662098;SGB=33.5675;VDB=0.0729905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.10:3329305 chr10:003329305 0 W/3329305-3329305 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.898832;DP=3126;DP4=1309,1589,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26474e-06;MQSB=0.317492;RPB=0.965137;SGB=54.144;VDB=0.129975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.10:3329409 chr10:003329409 0 W/3329409-3329409 FN2381 SNP C -> T AC=2;AN=192;BQB=0.0455541;DP=4260;DP4=1833,1941,21,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.05048e-21;MQSB=0.491343;RPB=0.984476;SGB=-51.4469;VDB=0.0164765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.10:3329834 chr10:003329834 0 W/3329834-3329834 FN2142-S SNP A -> C AC=2;AN=168;BQB=0.87706;DP=2771;DP4=1789,939,22,9;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.00541321;MQB=7.12246e-10;MQSB=0.385274;RPB=0.992792;SGB=25.6529;VDB=0.112866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.10:3329838 chr10:003329838 0 W/3329838-3329838 FN2142-S SNP T -> A AC=2;AN=168;BQB=0.296999;DP=2794;DP4=1813,933,23,10;HOB=0.0235261;ICB=0.494119;MQ=39;MQ0F=0.00608447;MQB=4.80658e-09;MQSB=0.937202;RPB=0.718707;SGB=-46.3351;VDB=0.0811396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.10:3333173 chr10:003333173 0 W/3333173-3333173 FN2453 SNP T -> C AC=1;AN=200;BQB=0.646498;DP=4572;DP4=2203,1960,10,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0203412;MQB=1.77914e-06;MQSB=0.526684;RPB=0.782079;SGB=9.48993;VDB=0.190271;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.10:3334160 chr10:003334160 0 W/3334160-3334160 FN4155-S SNP T -> C AC=1;AN=170;BQB=0.991043;DP=2638;DP4=1336,1214,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=39;MQ0F=0.0166793;MQB=0.984945;MQSB=0.000283208;RPB=0.74705;SGB=74.528;VDB=0.263199;EFF=INTRON(MODIFIER||||255|LOC_Os10g06480|protein_coding|CODING|LOC_Os10g06480.1|1|1) FN-105.SNP.10:3334805 chr10:003334805 0 W/3334805-3334805 FN-105 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN596-S.SNP.10:3335015 chr10:003335015 0 W/3335015-3335015 FN596-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN3910-S.SNP.10:3341790 chr10:003341790 0 W/3341790-3341790 FN3910-S SNP G -> A AC=2;AN=158;BQB=0.999462;DP=3171;DP4=1575,1485,7,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.9203e-08;MQSB=0.437928;RPB=0.478962;SGB=40.8124;VDB=0.684415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G24R|326|LOC_Os10g06510|protein_coding|CODING|LOC_Os10g06510.1|1|1) FN2273-S.SNP.10:3350907 chr10:003350907 0 W/3350907-3350907 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.586034;DP=5138;DP4=2438,2393,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00291942;MQB=1.73849e-16;MQSB=0.0739494;RPB=0.549337;SGB=67.0756;VDB=0.723641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R345W|1624|LOC_Os10g06520|protein_coding|CODING|LOC_Os10g06520.1|2|1) FN3802-S.SNP.10:3353926 chr10:003353926 0 W/3353926-3353926 FN3802-S SNP G -> A AC=1;AN=190;BQB=0.883562;DP=2766;DP4=1422,1261,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0144613;MQB=0.271759;MQSB=0.22595;RPB=0.963227;SGB=39.6545;VDB=0.712957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.10:3361203 chr10:003361203 0 W/3361203-3361203 FN2555-S SNP G -> C AC=1;AN=198;BQB=0.257942;DP=4172;DP4=1839,2079,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00599233;MQB=0.0439639;MQSB=0.06167;RPB=0.986136;SGB=-15.6211;VDB=0.765133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.10:3361766 chr10:003361766 0 W/3361766-3361766 FN-349 Single Base Substitution G-A INTERGENIC HOMO SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN4095-S.SNP.10:3362704 chr10:003362704 0 W/3362704-3362704 FN4095-S SNP T -> A AC=2;AN=182;BQB=0.919595;DP=2949;DP4=1352,1507,10,11;HOB=0.0217365;ICB=0.494567;MQ=38;MQ0F=0.0230587;MQB=0.060073;MQSB=7.32657e-08;RPB=0.104569;SGB=63.7146;VDB=0.169699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.10:3362893 chr10:003362893 0 W/3362893-3362893 FN2241-S SNP C -> T AC=2;AN=190;BQB=0.997601;DP=5110;DP4=2330,2370,23,20;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.118395;MQB=0.18864;MQSB=0;RPB=0.998607;SGB=95.1683;VDB=0.254659;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-150-1.SNP.10:3368572 chr10:003368572 0 W/3368572-3368572 FN_N1-150-1 Single Base Substitution C-T HET LOC_Os10g06550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN3308-S.SNP.10:3368635 chr10:003368635 0 W/3368635-3368635 FN3308-S SNP A -> G AC=2;AN=184;BQB=0.980058;DP=3019;DP4=1469,1435,15,21;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0198741;MQB=0.00773705;MQSB=7.75826e-10;RPB=0.967534;SGB=157.265;VDB=0.499856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E1210G|1662|LOC_Os10g06550|protein_coding|CODING|LOC_Os10g06550.1|4|1) FN927-S.SNP.10:3372207 chr10:003372207 0 W/3372207-3372207 FN927-S Single Base Substitution C-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN871-S.SNP.10:3376185 chr10:003376185 0 W/3376185-3376185 FN871-S Single Base Substitution G-T INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN713-S.SNP.10:3378812 chr10:003378812 0 W/3378812-3378812 FN713-S Single Base Substitution C-T INTERGENIC HOMO SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN347-S.SNP.10:3379884 chr10:003379884 0 W/3379884-3379884 FN347-S Single Base Substitution G-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3663-S.SNP.10:3380259 chr10:003380259 0 W/3380259-3380259 FN3663-S SNP G -> C AC=2;AN=190;BQB=0.93458;DP=3750;DP4=2246,1364,23,10;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.008;MQB=0.061597;MQSB=8.97504e-27;RPB=0.0457024;SGB=144.727;VDB=0.481051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.10:3383180 chr10:003383180 0 W/3383180-3383180 FN2485 SNP T -> A AC=2;AN=200;BQB=0.453436;DP=5141;DP4=2429,2343,14,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.99937e-20;MQSB=0.990426;RPB=0.791942;SGB=36.7778;VDB=0.618008;EFF=INTERGENIC(MODIFIER||||||||||1) FN-176.SNP.10:3385035 chr10:003385035 0 W/3385035-3385035 FN-176 Single Base Substitution A-G INTERGENIC HOMO SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN404-S.SNP.10:3388220 chr10:003388220 0 W/3388220-3388220 FN404-S Single Base Substitution A-T INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN2083-S.SNP.10:3391037 chr10:003391037 0 W/3391037-3391037 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.851444;DP=4321;DP4=1719,2432,26,105;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00462856;MQB=0;MQSB=0.337826;RPB=7.9604e-15;SGB=-2254.36;VDB=2.2836e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.10:3398093 chr10:003398093 0 W/3398093-3398093 FN3913-S SNP G -> T AC=1;AN=158;BQB=0.841471;DP=2376;DP4=1062,1219,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.68799e-07;MQSB=0.907374;RPB=0.960789;SGB=30.704;VDB=0.487101;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R48|145|LOC_Os10g06600|protein_coding|CODING|LOC_Os10g06600.1|1|1) W502-3-4.SNP.10:3410399 chr10:003410399 0 W/3410399-3410399 W502-3-4 Single Base Substitution A-G INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1205-S.SNP.10:3417406 chr10:003417406 0 W/3417406-3417406 FN1205-S Single Base Substitution A-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN416-S.SNP.10:3424543 chr10:003424543 0 W/3424543-3424543 FN416-S Single Base Substitution A-T INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN712-S.SNP.10:3437519 chr10:003437519 0 W/3437519-3437519 FN712-S Single Base Substitution T-C INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2436.SNP.10:3438772 chr10:003438772 0 W/3438772-3438772 FN2436 SNP C -> T AC=1;AN=200;BQB=0.931735;DP=4469;DP4=2043,2068,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.21257e-14;MQSB=0.907579;RPB=0.622255;SGB=72.7161;VDB=0.420745;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L60|181|LOC_Os10g06630|protein_coding|CODING|LOC_Os10g06630.1|1|1) FN2172-S.SNP.10:3441399 chr10:003441399 0 W/3441399-3441399 FN2172-S SNP G -> A AC=1;AN=168;BQB=0.000161973;DP=1978;DP4=657,1219,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.5299e-05;MQSB=0.859151;RPB=0.200831;SGB=-16.2342;VDB=0.190985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.10:3441925 chr10:003441925 0 W/3441925-3441925 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.379171;DP=3985;DP4=1777,1966,5,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.54549e-10;MQSB=0.754392;RPB=0.00585109;SGB=9.3494;VDB=0.034927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.10:3443342 chr10:003443342 0 W/3443342-3443342 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2444.SNP.10:3443391 chr10:003443391 0 W/3443391-3443391 FN2444 SNP G -> T AC=2;AN=200;BQB=0.337456;DP=5048;DP4=2342,2448,25,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000198098;MQB=3.76177e-28;MQSB=0.999995;RPB=0.75947;SGB=170.056;VDB=0.51003;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.10:3445616 chr10:003445616 0 W/3445616-3445616 FN_786-4-1 Single Base Substitution A-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-263.SNP.10:3447010 chr10:003447010 0 W/3447010-3447010 FN-263 Single Base Substitution G-A INTRON HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN1439-S.SNP.10:3450134 chr10:003450134 0 W/3450134-3450134 FN1439-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g06640 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN-327.SNP.10:3458637 chr10:003458637 0 W/3458637-3458637 FN-327 Single Base Substitution T-A INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN1757-S.SNP.10:3462749 chr10:003462749 0 W/3462749-3462749 FN1757-S SNP C -> T AC=2;AN=188;BQB=0.599656;DP=2744;DP4=958,1747,5,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.25194e-08;MQSB=0.947243;RPB=0.248234;SGB=-36.9078;VDB=0.479184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.10:3462750 chr10:003462750 0 W/3462750-3462750 FN1757-S SNP A -> C AC=2;AN=188;BQB=0.93849;DP=2758;DP4=958,1721,2,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.32513e-06;MQSB=0.961946;RPB=0.75311;SGB=-216.876;VDB=0.300215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.10:3465975 chr10:003465975 0 W/3465975-3465975 FN2436 SNP G -> T AC=1;AN=200;BQB=0.989621;DP=4532;DP4=2392,1863,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.74268e-17;MQSB=0.878406;RPB=0.740962;SGB=55.5366;VDB=0.941803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.10:3468369 chr10:003468369 0 W/3468369-3468369 FN2286 SNP A -> T AC=2;AN=192;BQB=0.968911;DP=4882;DP4=1951,2085,26,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.24085e-26;MQSB=0.351125;RPB=0.588115;SGB=-154.387;VDB=0.437817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H105L|379|LOC_Os10g06700|protein_coding|CODING|LOC_Os10g06700.1|1|1) FN2286.SNP.10:3468370 chr10:003468370 0 W/3468370-3468370 FN2286 SNP C -> T AC=2;AN=192;BQB=0.25821;DP=4885;DP4=2192,2351,21,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.12343e-22;MQSB=0.170437;RPB=0.971627;SGB=146.71;VDB=0.160974;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H105|379|LOC_Os10g06700|protein_coding|CODING|LOC_Os10g06700.1|1|1) FN3758-S.SNP.10:3469150 chr10:003469150 0 W/3469150-3469150 FN3758-S SNP C -> T AC=2;AN=190;BQB=0.870414;DP=2844;DP4=1230,1516,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.53486e-13;MQSB=0.701071;RPB=0.0876791;SGB=90.0802;VDB=0.365904;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y365|379|LOC_Os10g06700|protein_coding|CODING|LOC_Os10g06700.1|1|1) FN1264-S.SNP.10:3470004 chr10:003470004 0 W/3470004-3470004 FN1264-S Single Base Substitution G-T INTERGENIC HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1647-S.SNP.10:3471289 chr10:003471289 0 W/3471289-3471289 FN1647-S Single Base Substitution C-T INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN964-S.SNP.10:3481253 chr10:003481253 0 W/3481253-3481253 FN964-S Single Base Substitution C-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1104-S.SNP.10:3485323 chr10:003485323 0 W/3485323-3485323 FN1104-S Single Base Substitution T-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1104-S.SNP.10:3485324 chr10:003485324 0 W/3485324-3485324 FN1104-S Single Base Substitution T-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN_N1-151-1.SNP.10:3486799 chr10:003486799 0 W/3486799-3486799 FN_N1-151-1 Single Base Substitution G-A INTERGENIC HET SNo: 1373, Mutant_ID: FN_N1-151-1, Generation: M3, Mutations: 29, Genes: 18, Seed availability: No. FN2174-S.SNP.10:3490013 chr10:003490013 0 W/3490013-3490013 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.145686;DP=3794;DP4=1659,2106,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.64412e-05;MQSB=0.999934;RPB=0.849111;SGB=-34.9514;VDB=0.0381709;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.10:3496193 chr10:003496193 0 W/3496193-3496193 FN1299-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN979-S.SNP.10:3510671 chr10:003510671 0 W/3510671-3510671 FN979-S Single Base Substitution C-T INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN-214.SNP.10:3522979 chr10:003522979 0 W/3522979-3522979 FN-214 Single Base Substitution T-C INTERGENIC HOMO SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN3815-S.SNP.10:3523712 chr10:003523712 0 W/3523712-3523712 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.99403;DP=2603;DP4=1350,1154,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15405e-08;MQSB=0.944224;RPB=0.382264;SGB=18.552;VDB=0.106715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:3525264 chr10:003525264 0 W/3525264-3525264 FN2083-S SNP G -> A AC=2;AN=168;BQB=0.462208;DP=3734;DP4=1802,1868,23,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.68493e-29;MQSB=0.985566;RPB=0.355413;SGB=109.694;VDB=0.0906561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.10:3532844 chr10:003532844 0 W/3532844-3532844 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.0651056;DP=4519;DP4=2048,2302,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.10552e-09;MQSB=0.00118103;RPB=0.974377;SGB=58.1246;VDB=0.041329;EFF=INTRON(MODIFIER||||232|LOC_Os10g06790|protein_coding|CODING|LOC_Os10g06790.1|2|1) FN-232.SNP.10:3543690 chr10:003543690 0 W/3543690-3543690 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN-175.SNP.10:3543713 chr10:003543713 0 W/3543713-3543713 FN-175 Single Base Substitution C-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN_789-3-1.SNP.10:3545836 chr10:003545836 0 W/3545836-3545836 FN_789-3-1 Single Base Substitution T-A INTERGENIC HET SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN1356-S.SNP.10:3552546 chr10:003552546 0 W/3552546-3552546 FN1356-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN4096-S.SNP.10:3569015 chr10:003569015 0 W/3569015-3569015 FN4096-S SNP G -> A AC=1;AN=182;BQB=0.976693;DP=2864;DP4=1301,1496,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00139665;MQB=0.000401673;MQSB=0.999831;RPB=0.962982;SGB=21.5845;VDB=0.935112;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.10:3574373 chr10:003574373 0 W/3574373-3574373 FN495-S Single Base Substitution G-C INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN1190-S.SNP.10:3574721 chr10:003574721 0 W/3574721-3574721 FN1190-S Single Base Substitution T-A INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN751-S.SNP.10:3575931 chr10:003575931 0 W/3575931-3575931 FN751-S Single Base Substitution G-C INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3675-S.SNP.10:3580396 chr10:003580396 0 W/3580396-3580396 FN3675-S SNP T -> C AC=1;AN=190;BQB=0.931727;DP=3061;DP4=1358,1580,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.8757e-06;MQSB=0.996495;RPB=0.758726;SGB=21.8853;VDB=0.497855;EFF=INTRON(MODIFIER||||566|LOC_Os10g06860|protein_coding|CODING|LOC_Os10g06860.1|5|1) FN912-S.SNP.10:3587879 chr10:003587879 0 W/3587879-3587879 FN912-S Single Base Substitution G-A INTRON HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN589-S.SNP.10:3594034 chr10:003594034 0 W/3594034-3594034 FN589-S Single Base Substitution A-G INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN-169.SNP.10:3600495 chr10:003600495 0 W/3600495-3600495 FN-169 Single Base Substitution C-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN3517-S.SNP.10:3601587 chr10:003601587 0 W/3601587-3601587 FN3517-S SNP G -> T AC=1;AN=188;BQB=0.993899;DP=3096;DP4=1639,1362,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.87629e-05;MQSB=0.886883;RPB=0.99051;SGB=35.3493;VDB=0.763665;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.10:3601923 chr10:003601923 0 W/3601923-3601923 FN1274-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN4175-S.SNP.10:3602255 chr10:003602255 0 W/3602255-3602255 FN4175-S SNP A -> C AC=2;AN=170;BQB=0.929619;DP=2477;DP4=1222,1142,9,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.08149e-15;MQSB=0.998908;RPB=0.986602;SGB=72.7472;VDB=0.650718;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.10:3602376 chr10:003602376 0 W/3602376-3602376 FN861-S Single Base Substitution T-A INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. W423-5-1.SNP.10:3603423 chr10:003603423 0 W/3603423-3603423 W423-5-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2499.SNP.10:3605541 chr10:003605541 0 W/3605541-3605541 FN2499 SNP T -> A AC=2;AN=200;BQB=0.690756;DP=3861;DP4=1310,2304,11,25;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000259;MQB=8.71082e-19;MQSB=1.88654e-18;RPB=0.648695;SGB=78.9831;VDB=0.717017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.10:3605542 chr10:003605542 0 W/3605542-3605542 FN2499 SNP C -> A AC=2;AN=200;BQB=0.695387;DP=3858;DP4=1301,2255,9,24;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000518403;MQB=1.35202e-16;MQSB=4.74607e-18;RPB=0.373019;SGB=146.368;VDB=0.789264;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.10:3607089 chr10:003607089 0 W/3607089-3607089 FN318-S Single Base Substitution G-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN4146-S.SNP.10:3608406 chr10:003608406 0 W/3608406-3608406 FN4146-S SNP C -> A AC=1;AN=170;BQB=0.999202;DP=2009;DP4=1050,896,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.03756e-05;MQSB=0.77188;RPB=0.117294;SGB=34.5445;VDB=0.156836;EFF=INTERGENIC(MODIFIER||||||||||1) FN-135.SNP.10:3615752 chr10:003615752 0 W/3615752-3615752 FN-135 Single Base Substitution C-A INTERGENIC HET SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN1434-S.SNP.10:3623822 chr10:003623822 0 W/3623822-3623822 FN1434-S Single Base Substitution A-G INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3639-S.SNP.10:3637448 chr10:003637448 0 W/3637448-3637448 FN3639-S SNP A -> G AC=1;AN=190;BQB=0.925366;DP=2497;DP4=1167,1150,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00360433;MQB=0.00296782;MQSB=0.502942;RPB=0.878311;SGB=28.9929;VDB=0.850179;EFF=INTRON(MODIFIER||||808|LOC_Os10g06990|protein_coding|CODING|LOC_Os10g06990.1|1|1) FN623-S.SNP.10:3646671 chr10:003646671 0 W/3646671-3646671 FN623-S Single Base Substitution T-A INTERGENIC HOMO SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1317-S.SNP.10:3651086 chr10:003651086 0 W/3651086-3651086 FN1317-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN_830-6-1.SNP.10:3652586 chr10:003652586 0 W/3652586-3652586 FN_830-6-1 Single Base Substitution T-C Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2281.SNP.10:3661805 chr10:003661805 0 W/3661805-3661805 FN2281 SNP C -> T AC=1;AN=192;BQB=0.948523;DP=2441;DP4=428,1691,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.73891e-10;MQSB=0.334515;RPB=0.978398;SGB=-39.6843;VDB=0.0919363;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.10:3666245 chr10:003666245 0 W/3666245-3666245 FN1460-S Single Base Substitution G-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN484-S.SNP.10:3666837 chr10:003666837 0 W/3666837-3666837 FN484-S Single Base Substitution T-G INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3312-S.SNP.10:3671057 chr10:003671057 0 W/3671057-3671057 FN3312-S SNP A -> G AC=1;AN=184;BQB=0.991862;DP=3014;DP4=1794,1077,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42291e-11;MQSB=0.999993;RPB=0.832737;SGB=53.3568;VDB=0.149644;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.10:3672465 chr10:003672465 0 W/3672465-3672465 FN512-S Single Base Substitution C-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1728-S.SNP.10:3678479 chr10:003678479 0 W/3678479-3678479 FN1728-S SNP A -> C AC=1;AN=188;BQB=0.0236652;DP=3856;DP4=1857,1947,14,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.42926e-10;MQSB=0.977142;RPB=0.46211;SGB=-106.094;VDB=0.697209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.10:3679637 chr10:003679637 0 W/3679637-3679637 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.0879366;DP=4749;DP4=2233,1733,8,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.40325e-11;MQSB=0.217494;RPB=0.968075;SGB=-38.4742;VDB=0.616061;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.10:3690114 chr10:003690114 0 W/3690114-3690114 FN1382-S Single Base Substitution G-C INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2083-S.SNP.10:3694254 chr10:003694254 0 W/3694254-3694254 FN2083-S SNP A -> C AC=1;AN=168;BQB=0.116754;DP=3195;DP4=1274,1860,18,36;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=9.25687e-31;MQSB=0.0174896;RPB=0.37565;SGB=-1285.21;VDB=1.77022e-20;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:3694259 chr10:003694259 0 W/3694259-3694259 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.254709;DP=3172;DP4=1280,1824,18,41;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.34648e-28;MQSB=0.0266243;RPB=0.00806358;SGB=-686.035;VDB=1.23627e-15;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.10:3698276 chr10:003698276 0 W/3698276-3698276 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.787234;DP=3372;DP4=1663,1582,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.09864e-08;MQSB=0.952995;RPB=0.949172;SGB=50.3161;VDB=0.941083;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V233|398|LOC_Os10g07040|protein_coding|CODING|LOC_Os10g07040.1|2|1) FN3945-S.SNP.10:3698736 chr10:003698736 0 W/3698736-3698736 FN3945-S SNP C -> G AC=1;AN=168;BQB=0.96584;DP=3670;DP4=1502,2013,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.000817439;MQB=0.000487555;MQSB=0.841243;RPB=0.562415;SGB=34.3388;VDB=0.591045;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L387V|398|LOC_Os10g07040|protein_coding|CODING|LOC_Os10g07040.1|2|1) FN3288-S.SNP.10:3700936 chr10:003700936 0 W/3700936-3700936 FN3288-S SNP G -> T AC=2;AN=184;BQB=0.999607;DP=2628;DP4=1237,1248,14,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.72147e-14;MQSB=0.976965;RPB=0.88849;SGB=17.4548;VDB=0.363428;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.10:3701533 chr10:003701533 0 W/3701533-3701533 FN806-S Single Base Substitution A-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3792-S.SNP.10:3706593 chr10:003706593 0 W/3706593-3706593 FN3792-S SNP A -> T AC=1;AN=190;BQB=0.367757;DP=2749;DP4=1264,1402,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000382314;MQSB=0.944373;RPB=0.98824;SGB=13.4442;VDB=0.550602;EFF=INTERGENIC(MODIFIER||||||||||1) FN475-S.SNP.10:3708102 chr10:003708102 0 W/3708102-3708102 FN475-S Single Base Substitution T-C INTERGENIC HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN4172-S.SNP.10:3712306 chr10:003712306 0 W/3712306-3712306 FN4172-S SNP A -> G AC=2;AN=170;BQB=0.958706;DP=2280;DP4=1010,1191,10,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.04238e-11;MQSB=0.962956;RPB=0.468599;SGB=65.8619;VDB=0.390298;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.10:3713423 chr10:003713423 0 W/3713423-3713423 FN424-S Single Base Substitution T-G INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1635-S.SNP.10:3723903 chr10:003723903 0 W/3723903-3723903 FN1635-S SNP T -> A AC=1;AN=188;BQB=0.0256087;DP=4497;DP4=2077,2377,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000114976;MQSB=0.99877;RPB=0.135869;SGB=8.62479;VDB=0.454407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.10:3726302 chr10:003726302 0 W/3726302-3726302 FN2113-S SNP T -> A AC=1;AN=168;BQB=0.79381;DP=2537;DP4=829,1641,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.42486e-09;MQSB=0.967533;RPB=0.734804;SGB=17.068;VDB=0.47348;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.10:3739753 chr10:003739753 0 W/3739753-3739753 FN722-S Single Base Substitution A-G INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN3572-S.SNP.10:3746236 chr10:003746236 0 W/3746236-3746236 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.837918;DP=2895;DP4=1367,1458,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000345423;MQB=4.27324e-09;MQSB=0.00318257;RPB=0.373112;SGB=50.1574;VDB=0.306923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:3747862 chr10:003747862 0 W/3747862-3747862 FN2572-S Single Base Substitution A-G INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2795-S.SNP.10:3752696 chr10:003752696 0 W/3752696-3752696 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.319089;DP=3399;DP4=1793,1407,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33743e-06;MQSB=0.210238;RPB=0.971542;SGB=40.149;VDB=0.557167;EFF=INTERGENIC(MODIFIER||||||||||1) FN1287-S.SNP.10:3753431 chr10:003753431 0 W/3753431-3753431 FN1287-S Single Base Substitution A-G INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1679-S.SNP.10:3758576 chr10:003758576 0 W/3758576-3758576 FN1679-S SNP A -> T AC=2;AN=188;BQB=0.356124;DP=3381;DP4=1761,1547,26,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.05484e-23;MQSB=0.999299;RPB=0.251538;SGB=2.92897;VDB=0.902917;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctA|L251|683|LOC_Os10g07160|protein_coding|CODING|LOC_Os10g07160.1|6|1) FN3463-S.SNP.10:3761810 chr10:003761810 0 W/3761810-3761810 FN3463-S SNP C -> A AC=1;AN=184;BQB=0.962728;DP=3612;DP4=1650,1872,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.29231e-06;MQSB=0.965789;RPB=0.623459;SGB=44.2207;VDB=0.475586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R178L|683|LOC_Os10g07160|protein_coding|CODING|LOC_Os10g07160.1|3|1) FN-104.SNP.10:3765584 chr10:003765584 0 W/3765584-3765584 FN-104 Single Base Substitution T-A INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3773-S.SNP.10:3773874 chr10:003773874 0 W/3773874-3773874 FN3773-S SNP T -> C AC=1;AN=190;BQB=0.976136;DP=2406;DP4=1268,1079,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.4993e-05;MQSB=0.332334;RPB=0.815275;SGB=25.439;VDB=0.148491;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.10:3774666 chr10:003774666 0 W/3774666-3774666 FN4314-S SNP C -> G AC=1;AN=170;BQB=0.97467;DP=2445;DP4=1097,1264,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.43735e-08;MQSB=0.982521;RPB=0.7103;SGB=19.8839;VDB=0.965754;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||742|LOC_Os10g07190|protein_coding|CODING|LOC_Os10g07190.1|7|1),INTRON(MODIFIER||||742|LOC_Os10g07190|protein_coding|CODING|LOC_Os10g07190.1|6|1);LOF=(LOC_Os10g07190|LOC_Os10g07190|1|1.00) FN1128-S.SNP.10:3775652 chr10:003775652 0 W/3775652-3775652 FN1128-S Single Base Substitution G-C INTRON HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1543-S.SNP.10:3777831 chr10:003777831 0 W/3777831-3777831 FN1543-S Single Base Substitution A-T SYNONYMOUS_CODING Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN-251.SNP.10:3788314 chr10:003788314 0 W/3788314-3788314 FN-251 Single Base Substitution A-G INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2475.SNP.10:3792418 chr10:003792418 0 W/3792418-3792418 FN2475 SNP A -> C AC=1;AN=200;BQB=0.914106;DP=5005;DP4=2746,1953,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22736e-08;MQSB=0.712094;RPB=0.100752;SGB=77.2904;VDB=0.329882;EFF=INTERGENIC(MODIFIER||||||||||1) FN986-S.SNP.10:3792632 chr10:003792632 0 W/3792632-3792632 FN986-S Single Base Substitution C-A INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN825-S.SNP.10:3793061 chr10:003793061 0 W/3793061-3793061 FN825-S Single Base Substitution G-A INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN988-S.SNP.10:3795220 chr10:003795220 0 W/3795220-3795220 FN988-S Single Base Substitution C-T INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2134-S.SNP.10:3798084 chr10:003798084 0 W/3798084-3798084 FN2134-S SNP C -> G AC=1;AN=168;BQB=0.00924673;DP=4005;DP4=2004,1935,24,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.32113e-15;MQSB=0.982008;RPB=0.724914;SGB=-183.594;VDB=0.771675;EFF=INTRON(MODIFIER||||403|LOC_Os10g07229|protein_coding|CODING|LOC_Os10g07229.1|6|1) FN2160-S.SNP.10:3801454 chr10:003801454 0 W/3801454-3801454 FN2160-S SNP A -> G AC=1;AN=168;BQB=0.00791444;DP=3580;DP4=1726,1807,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51742e-05;MQSB=0.994077;RPB=0.998696;SGB=-192.054;VDB=0.813332;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S204P|403|LOC_Os10g07229|protein_coding|CODING|LOC_Os10g07229.1|4|1) FN-142.SNP.10:3809088 chr10:003809088 0 W/3809088-3809088 FN-142 Single Base Substitution T-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN1497-S.SNP.10:3813073 chr10:003813073 0 W/3813073-3813073 FN1497-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g07248 transposon protein, putative, unclassified, expressed SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2429.SNP.10:3816970 chr10:003816970 0 W/3816970-3816970 FN2429 SNP G -> C AC=1;AN=200;BQB=0.804438;DP=4665;DP4=2459,1948,9,14;HOB=5e-05;ICB=0.0001005;MQ=14;MQ0F=0.446945;MQB=0.00694521;MQSB=4.0484e-16;RPB=0.813094;SGB=17.5158;VDB=0.572369;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtC|V127|1460|LOC_Os10g07248|protein_coding|CODING|LOC_Os10g07248.1|6|1) FN-277.SNP.10:3818259 chr10:003818259 0 W/3818259-3818259 FN-277 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g07248 transposon protein, putative, unclassified, expressed SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN2353.SNP.10:3818729 chr10:003818729 0 W/3818729-3818729 FN2353 SNP A -> T AC=2;AN=192;BQB=0.737826;DP=4676;DP4=2244,2030,19,15;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.000855432;MQB=1.77717e-12;MQSB=0.00741654;RPB=0.692953;SGB=33.9487;VDB=0.57759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I663F|1460|LOC_Os10g07248|protein_coding|CODING|LOC_Os10g07248.1|8|1) FN1559-S.SNP.10:3824825 chr10:003824825 0 W/3824825-3824825 FN1559-S Single Base Substitution T-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN1353-S.SNP.10:3825398 chr10:003825398 0 W/3825398-3825398 FN1353-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3476-S.SNP.10:3826222 chr10:003826222 0 W/3826222-3826222 FN3476-S SNP G -> A AC=2;AN=184;BQB=0.999148;DP=2083;DP4=885,1110,8,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.17339e-09;MQSB=0.989922;RPB=1;SGB=66.8296;VDB=0.580763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3943-S.SNP.10:3833282 chr10:003833282 0 W/3833282-3833282 FN3943-S SNP C -> A AC=1;AN=168;BQB=0.961883;DP=2704;DP4=1153,1429,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.88986e-14;MQSB=0.993402;RPB=0.630972;SGB=39.2004;VDB=0.250584;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||931|LOC_Os10g07270|protein_coding|CODING|LOC_Os10g07270.1|11|1),INTRON(MODIFIER||||931|LOC_Os10g07270|protein_coding|CODING|LOC_Os10g07270.1|10|1);LOF=(LOC_Os10g07270|LOC_Os10g07270|1|1.00) FN2269-S.SNP.10:3834190 chr10:003834190 0 W/3834190-3834190 FN2269-S SNP T -> C AC=2;AN=190;BQB=0.948933;DP=5031;DP4=2199,2479,21,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.65814e-31;MQSB=0.916016;RPB=0.223288;SGB=254.02;VDB=0.252355;EFF=INTRON(MODIFIER||||931|LOC_Os10g07270|protein_coding|CODING|LOC_Os10g07270.1|8|1) FN543-S.SNP.10:3835638 chr10:003835638 0 W/3835638-3835638 FN543-S Single Base Substitution T-C INTRON HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3387-S.SNP.10:3842973 chr10:003842973 0 W/3842973-3842973 FN3387-S SNP C -> G AC=1;AN=184;BQB=0.998544;DP=2581;DP4=1026,1440,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.40191e-11;MQSB=0.990922;RPB=0.975436;SGB=49.835;VDB=0.382109;EFF=INTERGENIC(MODIFIER||||||||||1) FN906-S.SNP.10:3853397 chr10:003853397 0 W/3853397-3853397 FN906-S Single Base Substitution G-A INTERGENIC HET SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2271-S.SNP.10:3855531 chr10:003855531 0 W/3855531-3855531 FN2271-S SNP G -> A AC=1;AN=190;BQB=0.824614;DP=4523;DP4=2265,2053,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63571e-07;MQSB=0.872073;RPB=0.331846;SGB=58.2031;VDB=0.0225136;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.10:3865174 chr10:003865174 0 W/3865174-3865174 FN3512-S SNP T -> A AC=1;AN=188;BQB=0.997801;DP=3777;DP4=2027,1638,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.13684e-08;MQSB=0.462514;RPB=0.262753;SGB=43.0708;VDB=0.740498;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.10:3866302 chr10:003866302 0 W/3866302-3866302 FN897-S Single Base Substitution C-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3717-S.SNP.10:3871281 chr10:003871281 0 W/3871281-3871281 FN3717-S SNP G -> T AC=2;AN=190;BQB=0.971445;DP=2488;DP4=875,1531,5,9;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=2.76154e-07;MQSB=0.33877;RPB=0.440522;SGB=58.2031;VDB=0.663114;EFF=UTR_3_PRIME(MODIFIER||2275||166|LOC_Os10g07340|protein_coding|CODING|LOC_Os10g07340.1|1|1) FN3555-S.SNP.10:3877374 chr10:003877374 0 W/3877374-3877374 FN3555-S SNP T -> A AC=1;AN=188;BQB=0.995655;DP=2774;DP4=1365,1336,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.45197e-13;MQSB=0.997732;RPB=0.995875;SGB=98.9552;VDB=0.176149;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.10:3886173 chr10:003886173 0 W/3886173-3886173 FN4043-S SNP G -> A AC=1;AN=168;BQB=0.87375;DP=2565;DP4=1320,1133,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.74608e-08;MQSB=0.985128;RPB=0.986361;SGB=22.1847;VDB=0.821097;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.10:3889938 chr10:003889938 0 W/3889938-3889938 FN525-S Single Base Substitution C-T INTERGENIC HOMO SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-371.SNP.10:3895448 chr10:003895448 0 W/3895448-3895448 FN-371 Single Base Substitution C-T INTRON HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN3650-S.SNP.10:3898739 chr10:003898739 0 W/3898739-3898739 FN3650-S SNP C -> T AC=1;AN=190;BQB=0.869781;DP=2729;DP4=1240,1396,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.7858e-10;MQSB=0.983061;RPB=0.299227;SGB=26.2136;VDB=0.503614;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.10:3900500 chr10:003900500 0 W/3900500-3900500 FN2260-S SNP A -> G AC=1;AN=190;BQB=0.223582;DP=4597;DP4=2500,1711,20,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01608e-15;MQSB=0.93077;RPB=0.965228;SGB=35.1887;VDB=0.965452;EFF=INTERGENIC(MODIFIER||||||||||1) FN3385-S.SNP.10:3904257 chr10:003904257 0 W/3904257-3904257 FN3385-S SNP G -> T AC=1;AN=184;BQB=0.981218;DP=2995;DP4=1385,1529,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.76236e-05;MQSB=0.969996;RPB=0.948116;SGB=26.1347;VDB=0.892439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W99C|159|LOC_Os10g07390|protein_coding|CODING|LOC_Os10g07390.1|2|1) FN1520-S.SNP.10:3913792 chr10:003913792 0 W/3913792-3913792 FN1520-S Single Base Substitution C-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2715-S.SNP.10:3914015 chr10:003914015 0 W/3914015-3914015 FN2715-S SNP A -> G AC=1;AN=200;BQB=0.608484;DP=4756;DP4=2163,2173,10,11;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000210261;MQB=7.30293e-08;MQSB=0.678805;RPB=0.476742;SGB=14.3054;VDB=0.982005;EFF=INTERGENIC(MODIFIER||||||||||1) FN2216-S.SNP.10:3919983 chr10:003919983 0 W/3919983-3919983 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.999556;DP=4824;DP4=2140,2406,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5439e-07;MQSB=0.455414;RPB=0.998227;SGB=39.6545;VDB=0.0233202;EFF=INTRON(MODIFIER||||379|LOC_Os10g07410|protein_coding|CODING|LOC_Os10g07410.1|2|1) FN2771-S.SNP.10:3920303 chr10:003920303 0 W/3920303-3920303 FN2771-S SNP C -> T AC=1;AN=186;BQB=0.839504;DP=3898;DP4=1882,1746,11,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=4.96709e-12;MQSB=0.998243;RPB=0.766113;SGB=65.3149;VDB=0.979329;EFF=INTRON(MODIFIER||||379|LOC_Os10g07410|protein_coding|CODING|LOC_Os10g07410.1|2|1) FN2663-S.SNP.10:3924360 chr10:003924360 0 W/3924360-3924360 FN2663-S SNP T -> C AC=1;AN=200;BQB=0.541444;DP=4649;DP4=2320,2153,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.49698e-08;MQSB=0.832358;RPB=0.781253;SGB=33.0593;VDB=0.928309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.10:3928438 chr10:003928438 0 W/3928438-3928438 FN2449 SNP C -> G AC=1;AN=200;BQB=0.744026;DP=4527;DP4=1817,2380,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220897;MQB=2.27245e-07;MQSB=0.80597;RPB=0.615884;SGB=45.0543;VDB=0.389077;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.10:3949509 chr10:003949509 0 W/3949509-3949509 FN819-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN-87.SNP.10:3950501 chr10:003950501 0 W/3950501-3950501 FN-87 Single Base Substitution C-T INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2223-S.SNP.10:3950876 chr10:003950876 0 W/3950876-3950876 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.644799;DP=3659;DP4=1647,1763,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00273299;MQB=0.0183496;MQSB=0.098297;RPB=0.844953;SGB=80.9724;VDB=0.879019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A1178T|1283|LOC_Os10g07460|protein_coding|CODING|LOC_Os10g07460.1|9|1) FN3659-S.SNP.10:3959020 chr10:003959020 0 W/3959020-3959020 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.912335;DP=2663;DP4=1470,1102,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.13209e-05;MQSB=0.589517;RPB=0.986895;SGB=21.8853;VDB=0.390068;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.10:3961007 chr10:003961007 0 W/3961007-3961007 FN911-S Single Base Substitution G-A INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3913-S.SNP.10:3961054 chr10:003961054 0 W/3961054-3961054 FN3913-S SNP G -> A AC=1;AN=158;BQB=0.930959;DP=2606;DP4=1233,1274,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.06484e-10;MQSB=0.475962;RPB=0.618236;SGB=77.6532;VDB=0.739976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.10:3961309 chr10:003961309 0 W/3961309-3961309 FN3804-S SNP G -> A AC=2;AN=190;BQB=0.0541852;DP=3107;DP4=1371,1584,21,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.06214e-13;MQSB=0.965163;RPB=0.998238;SGB=74.7373;VDB=0.631254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3471-S.SNP.10:3967110 chr10:003967110 0 W/3967110-3967110 FN3471-S SNP G -> A AC=2;AN=184;BQB=0.525048;DP=2799;DP4=1565,1134,18,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.55724e-13;MQSB=0.977784;RPB=0.0777825;SGB=121.091;VDB=0.551805;EFF=INTRON(MODIFIER||||547|LOC_Os10g07470|protein_coding|CODING|LOC_Os10g07470.1|2|1) FN2210-S.SNP.10:3971031 chr10:003971031 0 W/3971031-3971031 FN2210-S SNP G -> A AC=2;AN=190;BQB=0.660652;DP=4884;DP4=2234,2337,12,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.42777e-14;MQSB=0.65899;RPB=0.999934;SGB=61.9679;VDB=0.725937;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.10:3977575 chr10:003977575 0 W/3977575-3977575 FN820-S Single Base Substitution A-G INTERGENIC HET SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN3569-S.SNP.10:3978938 chr10:003978938 0 W/3978938-3978938 FN3569-S SNP C -> G AC=2;AN=188;BQB=0.424084;DP=2690;DP4=1291,1281,22,21;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.4611e-11;MQSB=0.708245;RPB=0.976145;SGB=132.389;VDB=0.902119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3690-S.SNP.10:3980857 chr10:003980857 0 W/3980857-3980857 FN3690-S SNP A -> G AC=2;AN=190;BQB=0.732539;DP=3093;DP4=1474,1389,4,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.32754e-10;MQSB=0.848476;RPB=0.730533;SGB=67.3108;VDB=0.156207;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N549D|910|LOC_Os10g07480|protein_coding|CODING|LOC_Os10g07480.1|1|1) FN3653-S.SNP.10:3987306 chr10:003987306 0 W/3987306-3987306 FN3653-S SNP A -> G AC=1;AN=190;BQB=0.967259;DP=2796;DP4=1447,1246,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.33153e-05;MQSB=0.93977;RPB=0.225822;SGB=26.3271;VDB=0.0742966;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.10:3991430 chr10:003991430 0 W/3991430-3991430 FN-407 Single Base Substitution A-C INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.10:3991430 chr10:003991430 0 W/3991430-3991430 FN407-S Single Base Substitution A-C INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN460-S.SNP.10:3996801 chr10:003996801 0 W/3996801-3996801 FN460-S Single Base Substitution A-G INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN-306.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN-306 Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN-85.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN-85 Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN1075-S.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN1075-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3577-S.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN3577-S SNP T -> G AC=2;AN=188;BQB=0.996132;DP=2976;DP4=1503,1347,18,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00504032;MQB=8.6104e-19;MQSB=0.82402;RPB=0.992018;SGB=128.11;VDB=0.506993;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R215|844|LOC_Os10g07530|protein_coding|CODING|LOC_Os10g07530.1|2|1) FN3899-S.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN3899-S SNP T -> G AC=1;AN=158;BQB=0.373213;DP=2545;DP4=1253,1183,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00589391;MQB=0.00244238;MQSB=0.357508;RPB=0.846134;SGB=33.9591;VDB=0.792725;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R215|844|LOC_Os10g07530|protein_coding|CODING|LOC_Os10g07530.1|2|1) FN589-S.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN589-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN854-S.SNP.10:4015204 chr10:004015204 0 W/4015204-4015204 FN854-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2299.SNP.10:4020312 chr10:004020312 0 W/4020312-4020312 FN2299 SNP T -> A AC=1;AN=192;BQB=0.929482;DP=4350;DP4=1939,2080,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.37441e-11;MQSB=0.503093;RPB=0.543769;SGB=-192.48;VDB=0.116561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.10:4021868 chr10:004021868 0 W/4021868-4021868 FN2313 SNP C -> T AC=1;AN=192;BQB=0.898433;DP=5386;DP4=2614,2402,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64224e-16;MQSB=0.999991;RPB=0.657931;SGB=54.5574;VDB=0.602543;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.10:4022186 chr10:004022186 0 W/4022186-4022186 FN-132 Single Base Substitution C-T INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2483.SNP.10:4031397 chr10:004031397 0 W/4031397-4031397 FN2483 SNP A -> C AC=1;AN=200;BQB=0.999634;DP=4598;DP4=2221,2141,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45299e-08;MQSB=0.910036;RPB=0.997527;SGB=54.2646;VDB=0.337088;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.10:4042356 chr10:004042356 0 W/4042356-4042356 FN449-S Single Base Substitution A-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN853-S.SNP.10:4042504 chr10:004042504 0 W/4042504-4042504 FN853-S Single Base Substitution A-G INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3935-S.SNP.10:4043415 chr10:004043415 0 W/4043415-4043415 FN3935-S SNP A -> G AC=1;AN=158;BQB=0.953349;DP=2278;DP4=1357,756,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.95405e-06;MQSB=0.0011698;RPB=0.730567;SGB=60.1755;VDB=0.835685;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.10:4044289 chr10:004044289 0 W/4044289-4044289 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.317455;DP=4121;DP4=1657,2225,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.13779e-10;MQSB=0.047546;RPB=0.949233;SGB=54.5295;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.10:4044290 chr10:004044290 0 W/4044290-4044290 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.186387;DP=4120;DP4=1648,2172,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.47039e-09;MQSB=0.0501942;RPB=0.960649;SGB=77.1196;VDB=0.785005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.10:4044443 chr10:004044443 0 W/4044443-4044443 FN1688-S SNP G -> T AC=2;AN=188;BQB=0.560391;DP=2322;DP4=1799,475,22,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.85275e-15;MQSB=0.926575;RPB=0.8296;SGB=103.498;VDB=0.947382;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.10:4045257 chr10:004045257 0 W/4045257-4045257 FN3785-S SNP C -> G AC=1;AN=190;BQB=0.932417;DP=3387;DP4=2086,1157,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36275e-09;MQSB=0.758207;RPB=0.329448;SGB=71.8647;VDB=0.343006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.10:4049029 chr10:004049029 0 W/4049029-4049029 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.953094;DP=2930;DP4=1384,1392,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.81045e-06;MQSB=0.00108368;RPB=0.879338;SGB=28.7675;VDB=0.620184;EFF=INTRON(MODIFIER||||160|LOC_Os10g07546|protein_coding|CODING|LOC_Os10g07546.1|1|1) FN4136-S.SNP.10:4059121 chr10:004059121 0 W/4059121-4059121 FN4136-S SNP A -> T AC=1;AN=170;BQB=0.995323;DP=2201;DP4=1064,1032,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.30508e-08;MQSB=0.790204;RPB=0.115781;SGB=38.3207;VDB=0.526736;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.10:4061404 chr10:004061404 0 W/4061404-4061404 FN671-S Single Base Substitution C-A INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN671-S.SNP.10:4061405 chr10:004061405 0 W/4061405-4061405 FN671-S Single Base Substitution T-A INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN671-S.SNP.10:4061406 chr10:004061406 0 W/4061406-4061406 FN671-S Single Base Substitution G-T INTERGENIC HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. 701-6.SNP.10:4076264 chr10:004076264 0 W/4076264-4076264 701-6 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN2196-S.SNP.10:4079121 chr10:004079121 0 W/4079121-4079121 FN2196-S SNP T -> A AC=2;AN=190;BQB=0.200655;DP=4956;DP4=2663,1939,49,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.989255;RPB=0.928771;SGB=300.562;VDB=0.23837;EFF=INTRON(MODIFIER||||687|LOC_Os10g07556|protein_coding|CODING|LOC_Os10g07556.1|1|1) FN2196-S.SNP.10:4079122 chr10:004079122 0 W/4079122-4079122 FN2196-S SNP G -> A AC=2;AN=190;BQB=0.697252;DP=4955;DP4=2655,1864,50,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.953733;RPB=0.889205;SGB=257.019;VDB=0.173012;EFF=INTRON(MODIFIER||||687|LOC_Os10g07556|protein_coding|CODING|LOC_Os10g07556.1|1|1) FN3897-S.SNP.10:4080506 chr10:004080506 0 W/4080506-4080506 FN3897-S SNP A -> G AC=1;AN=158;BQB=0.817307;DP=2753;DP4=1490,1027,16,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.83637e-13;MQSB=0.875349;RPB=0.991798;SGB=130.087;VDB=0.0979758;EFF=INTRON(MODIFIER||||687|LOC_Os10g07556|protein_coding|CODING|LOC_Os10g07556.1|1|1) FN3330-S.SNP.10:4081463 chr10:004081463 0 W/4081463-4081463 FN3330-S SNP G -> C AC=2;AN=184;BQB=0.924953;DP=3193;DP4=1498,1608,16,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.61582e-17;MQSB=0.97632;RPB=0.986835;SGB=130.135;VDB=0.911206;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C53W|687|LOC_Os10g07556|protein_coding|CODING|LOC_Os10g07556.1|1|1) FN780-S.SNP.10:4081801 chr10:004081801 0 W/4081801-4081801 FN780-S Single Base Substitution T-C INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3679-S.SNP.10:4082823 chr10:004082823 0 W/4082823-4082823 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.998695;DP=1606;DP4=701,840,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.38001e-06;MQSB=0.114554;RPB=0.619946;SGB=62.7569;VDB=0.423297;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.10:4084265 chr10:004084265 0 W/4084265-4084265 FN2789-S SNP C -> T AC=2;AN=186;BQB=0.137486;DP=2979;DP4=1283,1253,15,13;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0;MQB=3.97087e-12;MQSB=0.0812127;RPB=0.941855;SGB=123.071;VDB=0.0375519;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.10:4090018 chr10:004090018 0 W/4090018-4090018 FN-64 Single Base Substitution T-C INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN1033-S.SNP.10:4098450 chr10:004098450 0 W/4098450-4098450 FN1033-S Single Base Substitution A-C INTRON HOMO SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2612-S.SNP.10:4101760 chr10:004101760 0 W/4101760-4101760 FN2612-S SNP G -> T AC=1;AN=186;BQB=0.302758;DP=3995;DP4=1967,1860,11,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.77056e-09;MQSB=0.972591;RPB=0.817874;SGB=54.5295;VDB=0.563978;EFF=INTRON(MODIFIER||||325|LOC_Os10g07612|protein_coding|CODING|LOC_Os10g07612.1|1|1) FN2612-S.SNP.10:4101761 chr10:004101761 0 W/4101761-4101761 FN2612-S SNP T -> A AC=1;AN=186;BQB=0.528554;DP=3991;DP4=1905,1837,11,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=6.47944e-12;MQSB=0.945501;RPB=0.965026;SGB=31.9395;VDB=0.677857;EFF=INTRON(MODIFIER||||325|LOC_Os10g07612|protein_coding|CODING|LOC_Os10g07612.1|1|1) FN514-S.SNP.10:4193744 chr10:004193744 0 W/4193744-4193744 FN514-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g07578 retrotransposon protein, putative, unclassified, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1214-S.SNP.10:4194778 chr10:004194778 0 W/4194778-4194778 FN1214-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g07578 retrotransposon protein, putative, unclassified, expressed SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN1031-S.SNP.10:4200105 chr10:004200105 0 W/4200105-4200105 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2219-S.SNP.10:4200463 chr10:004200463 0 W/4200463-4200463 FN2219-S SNP A -> T AC=1;AN=190;BQB=0.684482;DP=5049;DP4=2395,2260,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07204e-09;MQSB=0.520324;RPB=0.837766;SGB=62.7569;VDB=0.471439;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.10:4201234 chr10:004201234 0 W/4201234-4201234 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN4344-S.SNP.10:4207581 chr10:004207581 0 W/4207581-4207581 FN4344-S SNP A -> T AC=2;AN=170;BQB=0.752105;DP=2702;DP4=1337,1201,14,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.81055e-18;MQSB=0.978381;RPB=0.848592;SGB=127.84;VDB=0.379646;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.10:4217907 chr10:004217907 0 W/4217907-4217907 FN-279 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g07574 transposon protein, putative, unclassified, expressed SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1340-S.SNP.10:4221771 chr10:004221771 0 W/4221771-4221771 FN1340-S Single Base Substitution A-G INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN2597-S.SNP.10:4222896 chr10:004222896 0 W/4222896-4222896 FN2597-S SNP G -> C AC=1;AN=198;BQB=0.922549;DP=3599;DP4=1707,1617,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000277855;MQB=3.9242e-09;MQSB=0.545144;RPB=0.462133;SGB=81.7147;VDB=0.286183;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.10:4229767 chr10:004229767 0 W/4229767-4229767 FN3933-S SNP A -> G AC=1;AN=158;BQB=0.902966;DP=2422;DP4=1147,1140,9,12;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=2.70268e-07;MQSB=0.543556;RPB=0.646959;SGB=61.029;VDB=0.961696;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.10:4230043 chr10:004230043 0 W/4230043-4230043 FN-187 Single Base Substitution C-T INTERGENIC HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2422.SNP.10:4232785 chr10:004232785 0 W/4232785-4232785 FN2422 SNP C -> T AC=1;AN=200;BQB=0.745807;DP=4388;DP4=2028,2122,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95243e-13;MQSB=0.860926;RPB=0.0463748;SGB=79.9264;VDB=0.143022;EFF=INTRON(MODIFIER||||427|LOC_Os10g07622|protein_coding|CODING|LOC_Os10g07622.1|2|1) FN2350.SNP.10:4233371 chr10:004233371 0 W/4233371-4233371 FN2350 SNP A -> G AC=1;AN=192;BQB=0.44745;DP=4833;DP4=2324,2177,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.30297e-09;MQSB=0.840478;RPB=0.979412;SGB=85.7252;VDB=0.147563;EFF=INTRON(MODIFIER||||427|LOC_Os10g07622|protein_coding|CODING|LOC_Os10g07622.1|1|1) FN3487-S.SNP.10:4233995 chr10:004233995 0 W/4233995-4233995 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.926547;DP=2870;DP4=1506,1307,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.51e-09;MQSB=0.911738;RPB=0.533605;SGB=57.786;VDB=0.121425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L25F|427|LOC_Os10g07622|protein_coding|CODING|LOC_Os10g07622.1|1|1) FN2229-S.SNP.10:4234922 chr10:004234922 0 W/4234922-4234922 FN2229-S SNP A -> G AC=1;AN=190;BQB=0.95824;DP=4974;DP4=2252,2265,16,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=9.20797e-11;MQSB=0.88167;RPB=0.551586;SGB=46.6446;VDB=0.496991;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.10:4243358 chr10:004243358 0 W/4243358-4243358 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.620174;DP=4219;DP4=2012,2062,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.07214e-07;MQSB=0.984015;RPB=0.924647;SGB=25.7969;VDB=0.184881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A53V|255|LOC_Os10g07966|protein_coding|CODING|LOC_Os10g07966.1|1|1) FN897-S.SNP.10:4245072 chr10:004245072 0 W/4245072-4245072 FN897-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g07966 expressed protein SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN569-S.SNP.10:4253411 chr10:004253411 0 W/4253411-4253411 FN569-S Single Base Substitution G-T INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN4138-S.SNP.10:4269040 chr10:004269040 0 W/4269040-4269040 FN4138-S SNP C -> G AC=1;AN=170;BQB=0.684897;DP=1992;DP4=822,1082,5,12;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=2.38002e-07;MQSB=0.420121;RPB=0.236756;SGB=5.77511;VDB=0.112599;EFF=INTERGENIC(MODIFIER||||||||||1) FN683-S.SNP.10:4273642 chr10:004273642 0 W/4273642-4273642 FN683-S Single Base Substitution C-T INTERGENIC HET SNo: 616, Mutant_ID: FN683-S, Generation: M2, Mutations: 14, Genes: 45, Seed availability: Yes. FN3039-S.SNP.10:4273769 chr10:004273769 0 W/4273769-4273769 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.972824;DP=3117;DP4=1507,1527,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25217e-08;MQSB=0.984188;RPB=0.954863;SGB=18.2315;VDB=0.0437095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3663-S.SNP.10:4275278 chr10:004275278 0 W/4275278-4275278 FN3663-S SNP C -> T AC=2;AN=190;BQB=0.86965;DP=2725;DP4=1545,1071,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.44675e-12;MQSB=0.776646;RPB=0.729004;SGB=108.296;VDB=0.693523;EFF=INTERGENIC(MODIFIER||||||||||1) FN-328.SNP.10:4280557 chr10:004280557 0 W/4280557-4280557 FN-328 Single Base Substitution T-A INTERGENIC HET SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN1069-S.SNP.10:4287227 chr10:004287227 0 W/4287227-4287227 FN1069-S Single Base Substitution A-G INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN431-S.SNP.10:4287465 chr10:004287465 0 W/4287465-4287465 FN431-S Single Base Substitution G-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN2445.SNP.10:4288572 chr10:004288572 0 W/4288572-4288572 FN2445 SNP G -> A AC=1;AN=200;BQB=0.887226;DP=1642;DP4=668,663,2,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000166728;MQSB=0.977896;RPB=0.999898;SGB=35.8441;VDB=0.116373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.10:4288573 chr10:004288573 0 W/4288573-4288573 FN2445 SNP C -> A AC=1;AN=200;BQB=0.146336;DP=1639;DP4=767,687,3,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.47173e-05;MQSB=0.998629;RPB=0.779162;SGB=13.8539;VDB=0.138406;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.10:4291500 chr10:004291500 0 W/4291500-4291500 FN3319-S SNP G -> T AC=1;AN=184;BQB=0.992119;DP=2783;DP4=1529,1165,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.05593e-07;MQSB=0.959327;RPB=0.97632;SGB=39.699;VDB=0.491369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L264I|368|LOC_Os10g07998|protein_coding|CODING|LOC_Os10g07998.1|5|1) FN1363-S.SNP.10:4297411 chr10:004297411 0 W/4297411-4297411 FN1363-S Single Base Substitution G-A INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN461-S.SNP.10:4310772 chr10:004310772 0 W/4310772-4310772 FN461-S Single Base Substitution G-T INTRON HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN-366.SNP.10:4313159 chr10:004313159 0 W/4313159-4313159 FN-366 Single Base Substitution C-T INTRON HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1215-S.SNP.10:4313159 chr10:004313159 0 W/4313159-4313159 FN1215-S Single Base Substitution C-T INTRON HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN968-S.SNP.10:4313159 chr10:004313159 0 W/4313159-4313159 FN968-S Single Base Substitution C-T INTRON HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN-226.SNP.10:4314538 chr10:004314538 0 W/4314538-4314538 FN-226 Single Base Substitution G-T INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-251.SNP.10:4314657 chr10:004314657 0 W/4314657-4314657 FN-251 Single Base Substitution A-G INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2734-S.SNP.10:4316221 chr10:004316221 0 W/4316221-4316221 FN2734-S SNP C -> T AC=2;AN=200;BQB=0.329087;DP=4313;DP4=2499,1564,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.68349e-19;MQSB=0.965773;RPB=0.847045;SGB=164.789;VDB=0.618227;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.10:4317827 chr10:004317827 0 W/4317827-4317827 FN-390 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1373-S.SNP.10:4319101 chr10:004319101 0 W/4319101-4319101 FN1373-S Single Base Substitution C-A INTERGENIC HET SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3057-S.SNP.10:4319234 chr10:004319234 0 W/4319234-4319234 FN3057-S SNP T -> G AC=1;AN=184;BQB=0.999367;DP=2967;DP4=1689,1194,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.28636e-10;MQSB=0.94823;RPB=0.141476;SGB=71.3514;VDB=0.404482;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.10:4330238 chr10:004330238 0 W/4330238-4330238 FN2455 SNP A -> G AC=1;AN=200;BQB=0.748743;DP=4925;DP4=2224,2471,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83126e-13;MQSB=0.980446;RPB=0.434376;SGB=50.3263;VDB=0.776051;EFF=INTRON(MODIFIER||||506|LOC_Os10g08014|protein_coding|CODING|LOC_Os10g08014.1|5|1) FN2412.SNP.10:4340128 chr10:004340128 0 W/4340128-4340128 FN2412 SNP C -> T AC=2;AN=200;BQB=0.987334;DP=3757;DP4=1771,1637,13,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.6217e-10;MQSB=0.975767;RPB=0.820152;SGB=72.7161;VDB=0.370853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G21E|370|LOC_Os10g08018|protein_coding|CODING|LOC_Os10g08018.1|1|1) FN2575-S.SNP.10:4342715 chr10:004342715 0 W/4342715-4342715 FN2575-S SNP C -> G AC=2;AN=192;BQB=0.166899;DP=3853;DP4=1890,1690,38,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.08572e-39;MQSB=0.787113;RPB=0.997059;SGB=194.82;VDB=0.0749641;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.10:4349950 chr10:004349950 0 W/4349950-4349950 FN3572-S SNP C -> T AC=1;AN=188;BQB=0.918798;DP=3157;DP4=1585,1504,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.49484e-08;MQSB=0.954103;RPB=0.0291952;SGB=67.1521;VDB=0.0623137;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.10:4352080 chr10:004352080 0 W/4352080-4352080 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.965575;DP=2874;DP4=1337,1451,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29144e-06;MQSB=0.957961;RPB=0.201508;SGB=10.8165;VDB=0.125735;EFF=INTRON(MODIFIER||||724|LOC_Os10g08030|protein_coding|CODING|LOC_Os10g08030.1|4|1) FN3525-S.SNP.10:4357025 chr10:004357025 0 W/4357025-4357025 FN3525-S SNP C -> T AC=1;AN=188;BQB=0.571774;DP=2846;DP4=1434,1353,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00035137;MQB=0.00375154;MQSB=0.155699;RPB=0.714733;SGB=30.8063;VDB=0.762988;EFF=INTRON(MODIFIER||||339|LOC_Os10g08040|protein_coding|CODING|LOC_Os10g08040.1|2|1) FN3482-S.SNP.10:4361944 chr10:004361944 0 W/4361944-4361944 FN3482-S SNP T -> G AC=1;AN=184;BQB=0.974748;DP=2401;DP4=1205,1098,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.4563e-13;MQSB=0.877089;RPB=0.813408;SGB=60.4004;VDB=0.493794;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.10:4365086 chr10:004365086 0 W/4365086-4365086 FN497-S Single Base Substitution G-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. W416-6-1.SNP.10:4365852 chr10:004365852 0 W/4365852-4365852 W416-6-1 Single Base Substitution T-C INTERGENIC HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2708-S.SNP.10:4369908 chr10:004369908 0 W/4369908-4369908 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.0889239;DP=4704;DP4=2311,2241,10,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00650402;MQSB=0.0295081;RPB=0.621015;SGB=51.0851;VDB=0.67956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N306D|452|LOC_Os10g08060|protein_coding|CODING|LOC_Os10g08060.1|2|1) FN1038-S.SNP.10:4370219 chr10:004370219 0 W/4370219-4370219 FN1038-S Single Base Substitution G-C INTRON HOMO SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN3462-S.SNP.10:4370219 chr10:004370219 0 W/4370219-4370219 FN3462-S SNP G -> C AC=1;AN=184;BQB=0.630467;DP=2860;DP4=1261,1507,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.03311e-05;MQSB=0.96874;RPB=0.784076;SGB=57.786;VDB=0.27967;EFF=INTRON(MODIFIER||||452|LOC_Os10g08060|protein_coding|CODING|LOC_Os10g08060.1|2|1) FN3593-S.SNP.10:4372137 chr10:004372137 0 W/4372137-4372137 FN3593-S SNP G -> A AC=1;AN=190;BQB=0.952814;DP=3154;DP4=1634,1434,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24941e-05;MQSB=0.999616;RPB=0.992946;SGB=30.8803;VDB=0.979048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V205I|226|LOC_Os10g08070|protein_coding|CODING|LOC_Os10g08070.1|1|1) FN2595-S.SNP.10:4372883 chr10:004372883 0 W/4372883-4372883 FN2595-S SNP C -> A AC=1;AN=186;BQB=0.707758;DP=3859;DP4=1949,1698,8,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000259134;MQB=4.72821e-11;MQSB=0.716974;RPB=0.98785;SGB=58.1246;VDB=0.808655;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.10:4381003 chr10:004381003 0 W/4381003-4381003 FN_788-1-1 Single Base Substitution G-A HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2201-S.SNP.10:4383648 chr10:004383648 0 W/4383648-4383648 FN2201-S SNP A -> G AC=2;AN=190;BQB=0.584592;DP=4802;DP4=2182,2206,30,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.74263e-26;MQSB=0.938012;RPB=0.992199;SGB=110.492;VDB=0.435497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I375V|602|LOC_Os10g08100|protein_coding|CODING|LOC_Os10g08100.1|2|1) FN791-S.SNP.10:4390154 chr10:004390154 0 W/4390154-4390154 FN791-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g08120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2164-S.SNP.10:4392212 chr10:004392212 0 W/4392212-4392212 FN2164-S SNP A -> C AC=1;AN=168;BQB=0.0176986;DP=3129;DP4=1895,1198,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00287632;MQB=0.00356154;MQSB=0.00115865;RPB=0.961755;SGB=-69.6373;VDB=0.693673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.10:4396282 chr10:004396282 0 W/4396282-4396282 FN3357-S SNP A -> G AC=2;AN=184;BQB=0.999642;DP=3842;DP4=2163,1438,21,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.50095e-18;MQSB=0.767554;RPB=0.185994;SGB=34.1945;VDB=0.592099;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.10:4399590 chr10:004399590 0 W/4399590-4399590 FN3716-S SNP T -> A AC=1;AN=190;BQB=0.719505;DP=2024;DP4=870,1068,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0158143;MQSB=0.303146;RPB=0.99907;SGB=26.3271;VDB=0.634913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.10:4399647 chr10:004399647 0 W/4399647-4399647 FN1116-S Single Base Substitution C-G INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN3740-S.SNP.10:4399647 chr10:004399647 0 W/4399647-4399647 FN3740-S SNP C -> T AC=2;AN=190;BQB=0.875265;DP=2094;DP4=995,1021,2,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.08797e-05;MQSB=0.802433;RPB=0.630057;SGB=49.0954;VDB=0.738266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.10:4405639 chr10:004405639 0 W/4405639-4405639 FN2755-S SNP G -> A AC=1;AN=200;BQB=0.811519;DP=4748;DP4=2062,2433,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05052e-16;MQSB=0.982982;RPB=0.869712;SGB=114.132;VDB=0.296108;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.10:4407351 chr10:004407351 0 W/4407351-4407351 FN577-S Single Base Substitution A-G INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1745-S.SNP.10:4409768 chr10:004409768 0 W/4409768-4409768 FN1745-S SNP C -> A AC=1;AN=188;BQB=0.780004;DP=3513;DP4=1549,1924,13,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.76162e-17;MQSB=0.991516;RPB=0.671731;SGB=-42.3883;VDB=0.0976961;EFF=INTERGENIC(MODIFIER||||||||||1) FN435-S.SNP.10:4414311 chr10:004414311 0 W/4414311-4414311 FN435-S Single Base Substitution T-G INTERGENIC HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN2735-S.SNP.10:4415597 chr10:004415597 0 W/4415597-4415597 FN2735-S SNP C -> T AC=1;AN=200;BQB=0.616479;DP=4692;DP4=2383,2030,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.30806e-06;MQSB=0.926429;RPB=0.94647;SGB=16.4591;VDB=0.535431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.10:4416671 chr10:004416671 0 W/4416671-4416671 FN3806-S SNP G -> T AC=1;AN=190;BQB=0.994736;DP=3354;DP4=1470,1735,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00387597;MQB=0.00237332;MQSB=1.63973e-08;RPB=0.931669;SGB=39.6545;VDB=0.142558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.10:4420206 chr10:004420206 0 W/4420206-4420206 FN1180-S Single Base Substitution G-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN774-S.SNP.10:4422228 chr10:004422228 0 W/4422228-4422228 FN774-S Single Base Substitution G-T INTRON HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN515-S.SNP.10:4423702 chr10:004423702 0 W/4423702-4423702 FN515-S Single Base Substitution T-C INTRON HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN4181-S.SNP.10:4425640 chr10:004425640 0 W/4425640-4425640 FN4181-S SNP C -> T AC=1;AN=170;BQB=0.989362;DP=2615;DP4=1133,1422,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.025239;MQB=6.52116e-05;MQSB=1.90518e-06;RPB=0.191283;SGB=52.3148;VDB=0.370155;EFF=INTRON(MODIFIER||||1607|LOC_Os10g08180|protein_coding|CODING|LOC_Os10g08180.1|4|1) FN-396.SNP.10:4427752 chr10:004427752 0 W/4427752-4427752 FN-396 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os10g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN2797-S.SNP.10:4433744 chr10:004433744 0 W/4433744-4433744 FN2797-S SNP T -> A AC=1;AN=192;BQB=0.592034;DP=3682;DP4=1750,1728,4,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000271592;MQB=1.33484e-06;MQSB=0.961752;RPB=0.626833;SGB=40.3588;VDB=0.372756;EFF=INTRON(MODIFIER||||539|LOC_Os10g08190|protein_coding|CODING|LOC_Os10g08190.1|1|1) FN2566-S.SNP.10:4435187 chr10:004435187 0 W/4435187-4435187 FN2566-S SNP G -> A AC=1;AN=196;BQB=0.999986;DP=3242;DP4=1124,1869,5,6;HOB=5.20616e-05;ICB=0.000104654;MQ=48;MQ0F=0.00154226;MQB=7.2832e-06;MQSB=1.21424e-05;RPB=0.761615;SGB=-1.81641;VDB=0.964298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.10:4435199 chr10:004435199 0 W/4435199-4435199 FN2484 SNP C -> T AC=2;AN=200;BQB=0.574151;DP=3656;DP4=1427,2007,7,17;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000547046;MQB=1.3467e-09;MQSB=1.86169e-15;RPB=0.517444;SGB=104.921;VDB=0.238872;EFF=INTERGENIC(MODIFIER||||||||||1) FN4203-S.SNP.10:4436794 chr10:004436794 0 W/4436794-4436794 FN4203-S SNP T -> G AC=1;AN=170;BQB=0.983507;DP=3056;DP4=1395,1557,6,14;HOB=6.92042e-05;ICB=0.000139222;MQ=28;MQ0F=0.16983;MQB=0.144965;MQSB=0.974024;RPB=0.218744;SGB=58.9766;VDB=0.425957;EFF=INTRON(MODIFIER||||179|LOC_Os10g08200|protein_coding|CODING|LOC_Os10g08200.1|1|1) FN3715-S.SNP.10:4437110 chr10:004437110 0 W/4437110-4437110 FN3715-S SNP C -> G AC=1;AN=190;BQB=0.786805;DP=3357;DP4=1305,1928,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.12541;MQB=0.347721;MQSB=0;RPB=0.577528;SGB=13.4442;VDB=0.135767;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.10:4440214 chr10:004440214 0 W/4440214-4440214 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3509-S.SNP.10:4442986 chr10:004442986 0 W/4442986-4442986 FN3509-S SNP T -> A AC=1;AN=188;BQB=0.990422;DP=4304;DP4=2182,1937,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71563e-10;MQSB=0.964269;RPB=0.990759;SGB=53.7007;VDB=0.461507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M63K|179|LOC_Os10g08220|protein_coding|CODING|LOC_Os10g08220.1|1|1) FN1325-S.SNP.10:4447338 chr10:004447338 0 W/4447338-4447338 FN1325-S Single Base Substitution A-G INTERGENIC HET SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN-73.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN-73 Single Base Substitution A-G INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2195-S.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN2195-S SNP A -> G AC=2;AN=190;BQB=0.254667;DP=4761;DP4=2069,2237,19,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.53252e-28;MQSB=0.847827;RPB=0.970317;SGB=167.594;VDB=0.0849282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN2322 SNP A -> G AC=2;AN=192;BQB=0.156124;DP=5074;DP4=2277,2357,18,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.64821e-22;MQSB=0.98351;RPB=0.748817;SGB=90.4583;VDB=0.397454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN2411 SNP A -> G AC=2;AN=200;BQB=0.31956;DP=4673;DP4=2055,2211,37,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.03741e-36;MQSB=0.975071;RPB=0.142641;SGB=221.158;VDB=0.01164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN2675-S SNP A -> G AC=2;AN=200;BQB=0.804083;DP=4784;DP4=2159,2347,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.59442e-21;MQSB=0.900144;RPB=0.41276;SGB=48.014;VDB=0.4836;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN564-S Single Base Substitution A-G INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN_552-1-1.SNP.10:4449157 chr10:004449157 0 W/4449157-4449157 FN_552-1-1 Single Base Substitution A-G Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1409-S.SNP.10:4452848 chr10:004452848 0 W/4452848-4452848 FN1409-S Single Base Substitution A-G INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN949-S.SNP.10:4455576 chr10:004455576 0 W/4455576-4455576 FN949-S Single Base Substitution T-C INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2532-S.SNP.10:4467612 chr10:004467612 0 W/4467612-4467612 FN2532-S SNP A -> G AC=2;AN=198;BQB=0.776377;DP=3797;DP4=2001,1598,16,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000263366;MQB=5.4184e-15;MQSB=0.63786;RPB=0.6907;SGB=65.676;VDB=0.181964;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.10:4467843 chr10:004467843 0 W/4467843-4467843 FN3431-S SNP C -> A AC=1;AN=184;BQB=0.645718;DP=2515;DP4=1086,1351,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000105241;MQSB=0.390867;RPB=0.986744;SGB=8.14452;VDB=0.806426;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.10:4470448 chr10:004470448 0 W/4470448-4470448 FN-187 Single Base Substitution C-A INTERGENIC HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-192.SNP.10:4476912 chr10:004476912 0 W/4476912-4476912 FN-192 Single Base Substitution A-C INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2622-S.SNP.10:4477221 chr10:004477221 0 W/4477221-4477221 FN2622-S SNP G -> C AC=2;AN=200;BQB=0.758613;DP=4607;DP4=2250,2011,36,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.27801e-39;MQSB=0.738525;RPB=0.94917;SGB=259.252;VDB=0.155106;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.10:4484718 chr10:004484718 0 W/4484718-4484718 FN1058-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g08300 retrotransposon protein, putative, unclassified SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2150-S.SNP.10:4485508 chr10:004485508 0 W/4485508-4485508 FN2150-S SNP C -> T AC=2;AN=168;BQB=0.105431;DP=1892;DP4=948,869,5,13;HOB=0.0235261;ICB=0.494119;MQ=12;MQ0F=0.475687;MQB=0.0212357;MQSB=0;RPB=0.988915;SGB=-37.7974;VDB=0.16293;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A386|710|LOC_Os10g08300|protein_coding|CODING|LOC_Os10g08300.1|2|1) FN4154-S.SNP.10:4488631 chr10:004488631 0 W/4488631-4488631 FN4154-S SNP T -> C AC=1;AN=170;BQB=0.872348;DP=2392;DP4=1208,1020,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.03657e-06;MQSB=0.0173762;RPB=0.904339;SGB=27.2119;VDB=0.521201;EFF=INTERGENIC(MODIFIER||||||||||1) FN865-S.SNP.10:4489854 chr10:004489854 0 W/4489854-4489854 FN865-S Single Base Substitution C-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN-379.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN-379 Single Base Substitution G-C INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN2146-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN2146-S SNP G -> C AC=2;AN=168;BQB=0.108429;DP=3214;DP4=1110,2032,21,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.5827e-19;MQSB=0.629547;RPB=0.998751;SGB=-215.717;VDB=0.859612;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN3771-S SNP G -> C AC=2;AN=190;BQB=0.967471;DP=2353;DP4=1253,987,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.00749e-12;MQSB=0.605061;RPB=0.976138;SGB=41.5369;VDB=0.377976;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN3886-S SNP G -> C AC=1;AN=158;BQB=0.866562;DP=2147;DP4=1125,907,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.01815e-06;MQSB=0.673489;RPB=0.986181;SGB=37.4429;VDB=0.620629;EFF=INTERGENIC(MODIFIER||||||||||1) FN501-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN501-S Single Base Substitution G-C INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN661-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN661-S Single Base Substitution G-C INTERGENIC HOMO SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN797-S.SNP.10:4490047 chr10:004490047 0 W/4490047-4490047 FN797-S Single Base Substitution G-C INTERGENIC HET SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1499-S.SNP.10:4491327 chr10:004491327 0 W/4491327-4491327 FN1499-S Single Base Substitution A-G INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN_814-7-1.SNP.10:4491390 chr10:004491390 0 W/4491390-4491390 FN_814-7-1 Single Base Substitution A-G HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN2399.SNP.10:4496784 chr10:004496784 0 W/4496784-4496784 FN2399 SNP G -> A AC=1;AN=200;BQB=0.989937;DP=4518;DP4=2214,2065,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.78269e-08;MQSB=0.998905;RPB=0.98407;SGB=33.0593;VDB=0.0442697;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.10:4497087 chr10:004497087 0 W/4497087-4497087 FN3652-S SNP C -> T AC=1;AN=190;BQB=0.994418;DP=2801;DP4=1423,1266,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7036e-06;MQSB=0.91747;RPB=0.652457;SGB=44.5415;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN-274.SNP.10:4499147 chr10:004499147 0 W/4499147-4499147 FN-274 Single Base Substitution T-C INTRON HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. W674-4-1.SNP.10:4499465 chr10:004499465 0 W/4499465-4499465 W674-4-1 Single Base Substitution A-T INTRON HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3899-S.SNP.10:4504157 chr10:004504157 0 W/4504157-4504157 FN3899-S SNP A -> C AC=1;AN=158;BQB=0.820886;DP=1967;DP4=1187,692,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.29006e-08;MQSB=0.0138996;RPB=0.0856207;SGB=21.4493;VDB=0.0643746;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.10:4504202 chr10:004504202 0 W/4504202-4504202 FN861-S Single Base Substitution C-T INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN4302-S.SNP.10:4504631 chr10:004504631 0 W/4504631-4504631 FN4302-S SNP C -> A AC=1;AN=170;BQB=0.926766;DP=2082;DP4=880,1134,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.341e-07;MQSB=0.99964;RPB=0.337011;SGB=10.1134;VDB=0.800627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.10:4505724 chr10:004505724 0 W/4505724-4505724 FN1746-S SNP T -> G AC=1;AN=188;BQB=0.586562;DP=2658;DP4=2033,597,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.19844e-06;MQSB=0.761717;RPB=0.996992;SGB=5.5382;VDB=0.197212;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.10:4506032 chr10:004506032 0 W/4506032-4506032 FN1405-S Single Base Substitution T-A INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2419.SNP.10:4519166 chr10:004519166 0 W/4519166-4519166 FN2419 SNP C -> T AC=1;AN=200;BQB=0.344072;DP=4860;DP4=2442,2155,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.09764e-14;MQSB=0.865325;RPB=0.924764;SGB=69.1109;VDB=0.0139532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.10:4523066 chr10:004523066 0 W/4523066-4523066 FN2316 SNP G -> C AC=1;AN=192;BQB=0.998507;DP=2623;DP4=842,1645,2,13;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000381243;MQB=4.78966e-05;MQSB=0.0162455;RPB=0.963894;SGB=62.9035;VDB=0.0182067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.10:4523067 chr10:004523067 0 W/4523067-4523067 FN2316 SNP C -> A AC=1;AN=192;BQB=0.769706;DP=2593;DP4=818,1639,2,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000385654;MQB=0.000106037;MQSB=0.0190301;RPB=0.988351;SGB=58.3392;VDB=0.0255909;EFF=INTERGENIC(MODIFIER||||||||||1) FN-193.SNP.10:4524801 chr10:004524801 0 W/4524801-4524801 FN-193 Single Base Substitution G-T INTRON HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN2385.SNP.10:4528322 chr10:004528322 0 W/4528322-4528322 FN2385 SNP C -> T AC=1;AN=192;BQB=0.527873;DP=4053;DP4=1782,1919,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=0.0369814;MQSB=0.167031;RPB=0.990067;SGB=35.5177;VDB=0.712841;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.10:4528804 chr10:004528804 0 W/4528804-4528804 FN1292-S Single Base Substitution A-C INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2496.SNP.10:4530013 chr10:004530013 0 W/4530013-4530013 FN2496 SNP G -> T AC=1;AN=200;BQB=0.33948;DP=3965;DP4=1419,2240,1,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0214376;MQB=0.00215066;MQSB=0.302771;RPB=0.77192;SGB=33.0593;VDB=0.836021;EFF=INTERGENIC(MODIFIER||||||||||1) FN-12.SNP.10:4533516 chr10:004533516 0 W/4533516-4533516 FN-12 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os10g08360 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 12, Mutant_ID: FN-12, Generation: M2, Mutations: 37, Genes: 204, Seed availability: Yes. FN897-S.SNP.10:4539377 chr10:004539377 0 W/4539377-4539377 FN897-S Single Base Substitution A-G INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3529-S.SNP.10:4550314 chr10:004550314 0 W/4550314-4550314 FN3529-S SNP G -> A AC=1;AN=188;BQB=0.949809;DP=3707;DP4=1807,1560,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00026976;MQB=9.09169e-05;MQSB=0.181447;RPB=0.984651;SGB=39.8925;VDB=0.916943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.10:4556631 chr10:004556631 0 W/4556631-4556631 FN3657-S SNP G -> A AC=1;AN=190;BQB=0.800719;DP=2863;DP4=1226,1537,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30004e-06;MQSB=0.926862;RPB=0.914336;SGB=28.9929;VDB=0.566421;EFF=INTRON(MODIFIER||||889|LOC_Os10g08390|protein_coding|CODING|LOC_Os10g08390.1|7|1) FN3817-S.SNP.10:4558240 chr10:004558240 0 W/4558240-4558240 FN3817-S SNP C -> G AC=1;AN=190;BQB=0.973799;DP=2642;DP4=1166,1146,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000378501;MQB=1.63456e-06;MQSB=0.435204;RPB=0.317642;SGB=25.439;VDB=0.508632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.10:4562341 chr10:004562341 0 W/4562341-4562341 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN3591-S.SNP.10:4565002 chr10:004565002 0 W/4565002-4565002 FN3591-S SNP A -> T AC=1;AN=188;BQB=0.974063;DP=2878;DP4=1350,1429,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0201529;MQB=0.000531238;MQSB=0.374413;RPB=0.999991;SGB=58.0655;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.10:4567469 chr10:004567469 0 W/4567469-4567469 FN3771-S SNP T -> A AC=1;AN=190;BQB=0.918311;DP=2823;DP4=1395,1311,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0375487;MQB=0.0144854;MQSB=3.52699e-06;RPB=0.428353;SGB=21.1058;VDB=0.346151;EFF=INTERGENIC(MODIFIER||||||||||1) FN-334.SNP.10:4569621 chr10:004569621 0 W/4569621-4569621 FN-334 Single Base Substitution C-A INTRON HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3115-S.SNP.10:4571337 chr10:004571337 0 W/4571337-4571337 FN3115-S SNP A -> T AC=1;AN=184;BQB=0.952574;DP=3506;DP4=1613,1747,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.25857e-08;MQSB=0.831485;RPB=0.883041;SGB=49.835;VDB=0.777389;EFF=INTERGENIC(MODIFIER||||||||||1) FN1184-S.SNP.10:4572445 chr10:004572445 0 W/4572445-4572445 FN1184-S Single Base Substitution G-C INTERGENIC HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1277-S.SNP.10:4574637 chr10:004574637 0 W/4574637-4574637 FN1277-S Single Base Substitution A-T INTRON HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3710-S.SNP.10:4577263 chr10:004577263 0 W/4577263-4577263 FN3710-S SNP T -> C AC=2;AN=190;BQB=0.746961;DP=2846;DP4=1278,1482,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01251e-08;MQSB=0.995412;RPB=0.926862;SGB=28.7675;VDB=0.99186;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.10:4584825 chr10:004584825 0 W/4584825-4584825 FN1702-S SNP C -> A AC=2;AN=188;BQB=0.0497841;DP=2165;DP4=1657,473,13,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.85491e-07;MQSB=0.710984;RPB=0.394684;SGB=76.2387;VDB=0.561157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.10:4585961 chr10:004585961 0 W/4585961-4585961 FN3384-S SNP A -> T AC=1;AN=184;BQB=0.689833;DP=3079;DP4=1297,1607,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.87557e-08;MQSB=0.990307;RPB=0.773034;SGB=39.2696;VDB=0.688029;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.10:4585967 chr10:004585967 0 W/4585967-4585967 FN3384-S SNP A -> T AC=1;AN=184;BQB=0.812597;DP=3074;DP4=1306,1573,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.51008e-08;MQSB=0.914591;RPB=0.833238;SGB=5.28054;VDB=0.931634;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.10:4590770 chr10:004590770 0 W/4590770-4590770 FN4104-S SNP G -> A AC=2;AN=182;BQB=0.898823;DP=2967;DP4=1478,1423,6,4;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.2294e-05;MQSB=0.998628;RPB=0.825049;SGB=39.6007;VDB=0.684511;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M620I|955|LOC_Os10g08450|protein_coding|CODING|LOC_Os10g08450.1|2|1) FN2372.SNP.10:4599368 chr10:004599368 0 W/4599368-4599368 FN2372 SNP A -> T AC=1;AN=192;BQB=0.999977;DP=4985;DP4=2348,2302,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.37822e-11;MQSB=0.806398;RPB=0.387012;SGB=-38.813;VDB=0.584274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.10:4599654 chr10:004599654 0 W/4599654-4599654 FN3520-S SNP C -> A AC=1;AN=188;BQB=0.996253;DP=2790;DP4=1474,1202,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00275e-09;MQSB=0.937467;RPB=0.49484;SGB=43.0708;VDB=0.528561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.10:4600789 chr10:004600789 0 W/4600789-4600789 FN2116-S SNP A -> C AC=1;AN=168;BQB=0.870942;DP=2400;DP4=1262,1064,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.04596e-06;MQSB=0.950758;RPB=0.110292;SGB=1.32907;VDB=0.39472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D265A|494|LOC_Os10g08474|protein_coding|CODING|LOC_Os10g08474.1|1|1) FN3488-S.SNP.10:4603517 chr10:004603517 0 W/4603517-4603517 FN3488-S SNP C -> G AC=1;AN=184;BQB=0.999999;DP=2661;DP4=1558,1014,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.73793e-08;MQSB=0.88385;RPB=0.953464;SGB=62.3078;VDB=0.0693248;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.10:4603621 chr10:004603621 0 W/4603621-4603621 FN747-S Single Base Substitution A-G INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2701-S.SNP.10:4603695 chr10:004603695 0 W/4603695-4603695 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.975519;DP=4397;DP4=2009,2127,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96378e-09;MQSB=0.922215;RPB=0.948772;SGB=26.8797;VDB=0.301205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.10:4603739 chr10:004603739 0 W/4603739-4603739 FN1072-S Single Base Substitution C-T INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3858-S.SNP.10:4608837 chr10:004608837 0 W/4608837-4608837 FN3858-S SNP T -> C AC=2;AN=158;BQB=0.996772;DP=2290;DP4=1034,1127,10,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.82598e-17;MQSB=0.376341;RPB=0.392697;SGB=87.9846;VDB=0.138705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1641-S.SNP.10:4609160 chr10:004609160 0 W/4609160-4609160 FN1641-S Single Base Substitution C-T INTERGENIC Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN-231.SNP.10:4612441 chr10:004612441 0 W/4612441-4612441 FN-231 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g08500 retrotransposon protein, putative, unclassified, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-231.SNP.10:4612442 chr10:004612442 0 W/4612442-4612442 FN-231 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g08500 retrotransposon protein, putative, unclassified, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. W500-4-7-1.SNP.10:4615341 chr10:004615341 0 W/4615341-4615341 W500-4-7-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN3959-S.SNP.10:4624216 chr10:004624216 0 W/4624216-4624216 FN3959-S SNP G -> A AC=1;AN=168;BQB=0.966206;DP=2147;DP4=1021,1060,2,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000364301;MQSB=0.991961;RPB=0.932727;SGB=30.0193;VDB=0.310231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1722-S.SNP.10:4625208 chr10:004625208 0 W/4625208-4625208 FN1722-S SNP G -> A AC=1;AN=188;BQB=0.16136;DP=2950;DP4=1164,1751,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.26439e-05;MQSB=0.998903;RPB=0.987516;SGB=-15.5431;VDB=0.782605;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.10:4628152 chr10:004628152 0 W/4628152-4628152 FN1209-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g08530 expressed protein SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN462-S.SNP.10:4632556 chr10:004632556 0 W/4632556-4632556 FN462-S Single Base Substitution C-G INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1142-S.SNP.10:4634833 chr10:004634833 0 W/4634833-4634833 FN1142-S Single Base Substitution C-T INTRON HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN-14.SNP.10:4636749 chr10:004636749 0 W/4636749-4636749 FN-14 Single Base Substitution A-G INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN747-S.SNP.10:4638005 chr10:004638005 0 W/4638005-4638005 FN747-S Single Base Substitution G-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2181-S.SNP.10:4639384 chr10:004639384 0 W/4639384-4639384 FN2181-S SNP G -> T AC=1;AN=190;BQB=0.660589;DP=4466;DP4=2459,1708,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.72859e-08;MQSB=0.381829;RPB=0.826395;SGB=39.6545;VDB=0.87967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.10:4650378 chr10:004650378 0 W/4650378-4650378 FN2304 SNP C -> T AC=1;AN=192;BQB=0.174821;DP=3083;DP4=814,1730,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.00843334;MQB=0.493465;MQSB=0.10456;RPB=0.741698;SGB=39.78;VDB=0.677448;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.10:4652206 chr10:004652206 0 W/4652206-4652206 FN793-S Single Base Substitution A-C INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN471-S.SNP.10:4655320 chr10:004655320 0 W/4655320-4655320 FN471-S Single Base Substitution G-C INTERGENIC HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN2621-S.SNP.10:4669915 chr10:004669915 0 W/4669915-4669915 FN2621-S SNP A -> T AC=2;AN=200;BQB=0.788967;DP=3082;DP4=893,2023,18,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.49997e-21;MQSB=0.0129268;RPB=0.805374;SGB=141.967;VDB=0.0134107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.10:4677287 chr10:004677287 0 W/4677287-4677287 FN2376 SNP C -> T AC=1;AN=192;BQB=0.272547;DP=4961;DP4=2427,2145,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.29909e-08;MQSB=0.867504;RPB=0.623388;SGB=61.1661;VDB=0.816543;EFF=INTRON(MODIFIER||||408|LOC_Os10g08610|protein_coding|CODING|LOC_Os10g08610.1|1|1) FN351-S.SNP.10:4678434 chr10:004678434 0 W/4678434-4678434 FN351-S Single Base Substitution T-C INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1173-S.SNP.10:4682438 chr10:004682438 0 W/4682438-4682438 FN1173-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g08620 chalcone and stilbene synthases, putative, expressed SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1462-S.SNP.10:4683527 chr10:004683527 0 W/4683527-4683527 FN1462-S Single Base Substitution C-T INTRON HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3774-S.SNP.10:4686187 chr10:004686187 0 W/4686187-4686187 FN3774-S SNP T -> A AC=2;AN=190;BQB=0.915769;DP=2701;DP4=1342,1240,20,13;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.00925583;MQB=2.90482e-06;MQSB=5.83472e-07;RPB=0.958942;SGB=107.178;VDB=0.989323;EFF=INTRON(MODIFIER||||88|LOC_Os10g08640|protein_coding|CODING|LOC_Os10g08640.1|1|1) FN4173-S.SNP.10:4689901 chr10:004689901 0 W/4689901-4689901 FN4173-S SNP G -> A AC=1;AN=170;BQB=0.971004;DP=3124;DP4=1828,1192,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0707426;MQB=0.99997;MQSB=8.09068e-09;RPB=0.9962;SGB=38.987;VDB=0.397567;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P56L|545|LOC_Os10g08650|protein_coding|CODING|LOC_Os10g08650.1|1|1) FN944-S.SNP.10:4694088 chr10:004694088 0 W/4694088-4694088 FN944-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g08660 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3494-S.SNP.10:4704323 chr10:004704323 0 W/4704323-4704323 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.873832;DP=2747;DP4=1249,1339,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81099e-09;MQSB=0.824675;RPB=0.146619;SGB=57.786;VDB=0.0965375;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.10:4709701 chr10:004709701 0 W/4709701-4709701 FN3762-S SNP C -> G AC=2;AN=190;BQB=0.770802;DP=2496;DP4=1147,1215,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.61744e-13;MQSB=0.663395;RPB=0.601564;SGB=46.6446;VDB=0.541581;EFF=INTRON(MODIFIER||||136|LOC_Os10g08680|protein_coding|CODING|LOC_Os10g08680.1|1|1) FN3462-S.SNP.10:4711620 chr10:004711620 0 W/4711620-4711620 FN3462-S SNP C -> T AC=1;AN=184;BQB=0.968776;DP=2557;DP4=1140,1319,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53229e-08;MQSB=0.883485;RPB=0.924574;SGB=35.7479;VDB=0.386524;EFF=INTRON(MODIFIER||||136|LOC_Os10g08680|protein_coding|CODING|LOC_Os10g08680.1|1|1) FN-101.SNP.10:4711945 chr10:004711945 0 W/4711945-4711945 FN-101 Single Base Substitution C-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2729-S.SNP.10:4712092 chr10:004712092 0 W/4712092-4712092 FN2729-S SNP C -> G AC=1;AN=200;BQB=0.506678;DP=4764;DP4=2556,1928,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.00043e-10;MQSB=0.893223;RPB=0.749379;SGB=34.6953;VDB=0.70998;EFF=INTRON(MODIFIER||||136|LOC_Os10g08680|protein_coding|CODING|LOC_Os10g08680.1|2|1) FN4230-S.SNP.10:4715431 chr10:004715431 0 W/4715431-4715431 FN4230-S SNP C -> G AC=1;AN=170;BQB=0.451392;DP=2642;DP4=1317,1235,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00794852;MQB=0.121807;MQSB=0.0194793;RPB=0.752367;SGB=43.4296;VDB=0.93244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.10:4719649 chr10:004719649 0 W/4719649-4719649 FN-152 Single Base Substitution G-T STOP_GAINED HET LOC_Os10g08702 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN2658-S.SNP.10:4720042 chr10:004720042 0 W/4720042-4720042 FN2658-S SNP A -> C AC=1;AN=198;BQB=0.999916;DP=4883;DP4=2403,2274,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00573418;MQB=5.54907e-12;MQSB=0.99993;RPB=0.92834;SGB=104.921;VDB=0.403908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I644L|1251|LOC_Os10g08702|protein_coding|CODING|LOC_Os10g08702.1|3|1) FN351-S.SNP.10:4721723 chr10:004721723 0 W/4721723-4721723 FN351-S Single Base Substitution G-C INTRON HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN654-S.SNP.10:4724313 chr10:004724313 0 W/4724313-4724313 FN654-S Single Base Substitution G-T INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2583-S.SNP.10:4726640 chr10:004726640 0 W/4726640-4726640 FN2583-S SNP T -> C AC=1;AN=198;BQB=0.564257;DP=4985;DP4=2436,2299,16,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.33272e-14;MQSB=0.959299;RPB=0.218644;SGB=63.3521;VDB=0.826725;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.10:4728744 chr10:004728744 0 W/4728744-4728744 FN4174-S SNP G -> T AC=2;AN=170;BQB=0.778796;DP=2616;DP4=1263,1265,12,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.3273e-14;MQSB=0.996835;RPB=0.174858;SGB=44.3104;VDB=0.863619;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.10:4732797 chr10:004732797 0 W/4732797-4732797 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3934-S.SNP.10:4734131 chr10:004734131 0 W/4734131-4734131 FN3934-S SNP G -> A AC=1;AN=158;BQB=0.769105;DP=2463;DP4=1346,1022,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.05039e-05;MQSB=0.927893;RPB=0.416039;SGB=38.3284;VDB=0.534485;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.10:4734527 chr10:004734527 0 W/4734527-4734527 FN4240-S SNP A -> G AC=2;AN=170;BQB=0.927455;DP=2594;DP4=1279,1254,9,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.48346e-09;MQSB=0.973981;RPB=0.700094;SGB=52.0913;VDB=0.498572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.10:4734594 chr10:004734594 0 W/4734594-4734594 FN3039-S SNP T -> C AC=1;AN=184;BQB=0.952613;DP=3002;DP4=1312,1618,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32976e-06;MQSB=0.967753;RPB=0.830635;SGB=39.699;VDB=0.620674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.10:4739072 chr10:004739072 0 W/4739072-4739072 FN2784-S SNP C -> T AC=1;AN=198;BQB=0.986463;DP=4585;DP4=2409,1937,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.30814e-15;MQSB=0.640922;RPB=0.302976;SGB=65.676;VDB=0.132402;EFF=INTRON(MODIFIER||||521|LOC_Os10g08740|protein_coding|CODING|LOC_Os10g08740.1|1|1) FN884-S.SNP.10:4739233 chr10:004739233 0 W/4739233-4739233 FN884-S Single Base Substitution G-T INTRON HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN483-S.SNP.10:4743175 chr10:004743175 0 W/4743175-4743175 FN483-S Single Base Substitution C-T INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3687-S.SNP.10:4746836 chr10:004746836 0 W/4746836-4746836 FN3687-S SNP C -> G AC=2;AN=190;BQB=0.995104;DP=2618;DP4=1293,1217,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.31092e-15;MQSB=0.99522;RPB=0.722477;SGB=112.85;VDB=0.959407;EFF=UTR_3_PRIME(MODIFIER||1081||96|LOC_Os10g08754|protein_coding|CODING|LOC_Os10g08754.1|5|1) FN3553-S.SNP.10:4750625 chr10:004750625 0 W/4750625-4750625 FN3553-S SNP G -> T AC=2;AN=188;BQB=0.934691;DP=2770;DP4=1284,1369,6,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.06281e-14;MQSB=0.811307;RPB=0.998232;SGB=71.4172;VDB=0.288858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.10:4750627 chr10:004750627 0 W/4750627-4750627 FN3553-S SNP A -> T AC=2;AN=188;BQB=0.917198;DP=2771;DP4=1285,1408,8,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.91517e-15;MQSB=0.881659;RPB=0.765086;SGB=43.8792;VDB=0.226094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.10:4763696 chr10:004763696 0 W/4763696-4763696 FN2134-S SNP A -> C AC=1;AN=168;BQB=0.154407;DP=3142;DP4=1827,1261,10,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.21322e-12;MQSB=0.492008;RPB=0.94743;SGB=15.6372;VDB=0.851139;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.10:4767354 chr10:004767354 0 W/4767354-4767354 FN524-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2697-S.SNP.10:4769334 chr10:004769334 0 W/4769334-4769334 FN2697-S SNP C -> G AC=1;AN=200;BQB=0.84544;DP=6013;DP4=3561,2140,6,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0354232;MQB=0.0862705;MQSB=0;RPB=0.144942;SGB=40.2696;VDB=0.509971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P352A|1446|LOC_Os10g08820|protein_coding|CODING|LOC_Os10g08820.1|1|1) FN1698-S.SNP.10:4769534 chr10:004769534 0 W/4769534-4769534 FN1698-S SNP G -> A AC=2;AN=188;BQB=0.784478;DP=2385;DP4=1482,861,16,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0381551;MQB=1.81558e-08;MQSB=0.980394;RPB=0.605827;SGB=46.4225;VDB=0.582894;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T418|1446|LOC_Os10g08820|protein_coding|CODING|LOC_Os10g08820.1|1|1) FN2102-S.SNP.10:4770009 chr10:004770009 0 W/4770009-4770009 FN2102-S SNP G -> T AC=1;AN=168;BQB=0.543488;DP=3501;DP4=1686,1767,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.210226;MQB=0.356222;MQSB=1.59146e-05;RPB=0.994273;SGB=29.4772;VDB=0.614059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D577Y|1446|LOC_Os10g08820|protein_coding|CODING|LOC_Os10g08820.1|1|1) FN4208-S.SNP.10:4774298 chr10:004774298 0 W/4774298-4774298 FN4208-S SNP C -> T AC=1;AN=170;BQB=0.355872;DP=2535;DP4=1268,1130,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000788955;MQB=4.8128e-10;MQSB=0.00165568;RPB=0.71742;SGB=29.6545;VDB=0.968131;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.10:4776314 chr10:004776314 0 W/4776314-4776314 FN_N1-119-1 Single Base Substitution G-C HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN3375-S.SNP.10:4777203 chr10:004777203 0 W/4777203-4777203 FN3375-S SNP A -> G AC=1;AN=184;BQB=0.918492;DP=2753;DP4=1309,1342,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.25929e-06;MQSB=0.847103;RPB=0.674277;SGB=25.1826;VDB=0.268014;EFF=INTRON(MODIFIER||||340|LOC_Os10g08830|protein_coding|CODING|LOC_Os10g08830.1|4|1) FN3516-S.SNP.10:4777637 chr10:004777637 0 W/4777637-4777637 FN3516-S SNP A -> T AC=2;AN=188;BQB=0.970429;DP=2528;DP4=1210,1241,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.93886e-13;MQSB=0.924234;RPB=0.410947;SGB=89.8686;VDB=0.572881;EFF=INTRON(MODIFIER||||340|LOC_Os10g08830|protein_coding|CODING|LOC_Os10g08830.1|4|1) FN-279.SNP.10:4779901 chr10:004779901 0 W/4779901-4779901 FN-279 Single Base Substitution G-A INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2597-S.SNP.10:4783811 chr10:004783811 0 W/4783811-4783811 FN2597-S SNP A -> G AC=1;AN=198;BQB=0.768301;DP=3967;DP4=1835,1895,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.7118e-11;MQSB=0.933164;RPB=0.698902;SGB=109.285;VDB=0.148236;EFF=INTRON(MODIFIER||||387|LOC_Os10g08840|protein_coding|CODING|LOC_Os10g08840.1|1|1),INTRON(MODIFIER||||357|LOC_Os10g08840|protein_coding|CODING|LOC_Os10g08840.2|1|1) FN3393-S.SNP.10:4784964 chr10:004784964 0 W/4784964-4784964 FN3393-S SNP A -> G AC=2;AN=184;BQB=0.999986;DP=2599;DP4=1147,1341,12,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.66108e-10;MQSB=0.667535;RPB=0.322772;SGB=75.8731;VDB=0.708022;EFF=INTRON(MODIFIER||||387|LOC_Os10g08840|protein_coding|CODING|LOC_Os10g08840.1|2|1),INTRON(MODIFIER||||357|LOC_Os10g08840|protein_coding|CODING|LOC_Os10g08840.2|2|1) FN2448.SNP.10:4797730 chr10:004797730 0 W/4797730-4797730 FN2448 SNP T -> A AC=1;AN=200;BQB=0.782953;DP=4260;DP4=1876,2086,7,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=9.22156e-06;MQSB=0.577461;RPB=0.862838;SGB=43.8747;VDB=0.120452;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.10:4799255 chr10:004799255 0 W/4799255-4799255 FN795-S Single Base Substitution A-G INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN793-S.SNP.10:4824945 chr10:004824945 0 W/4824945-4824945 FN793-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g08920 retrotransposon protein, putative, unclassified, expressed SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2630-S.SNP.10:4825522 chr10:004825522 0 W/4825522-4825522 FN2630-S SNP G -> A AC=2;AN=200;BQB=0.744398;DP=5153;DP4=2398,2444,22,39;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000388123;MQB=2.8182e-15;MQSB=0.165873;RPB=0.805379;SGB=209.713;VDB=0.975942;EFF=INTRON(MODIFIER||||1759|LOC_Os10g08920|protein_coding|CODING|LOC_Os10g08920.1|6|1) FN1396-S.SNP.10:4825944 chr10:004825944 0 W/4825944-4825944 FN1396-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g08920 retrotransposon protein, putative, unclassified, expressed SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN735-S.SNP.10:4825944 chr10:004825944 0 W/4825944-4825944 FN735-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g08920 retrotransposon protein, putative, unclassified, expressed SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2782-S.SNP.10:4827129 chr10:004827129 0 W/4827129-4827129 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.744182;DP=3772;DP4=1960,1608,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000795334;MQB=9.61596e-09;MQSB=0.851622;RPB=0.930265;SGB=72.5051;VDB=0.105946;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R958K|1759|LOC_Os10g08920|protein_coding|CODING|LOC_Os10g08920.1|5|1) FN3527-S.SNP.10:4827798 chr10:004827798 0 W/4827798-4827798 FN3527-S SNP G -> A AC=1;AN=188;BQB=0.678132;DP=3912;DP4=2338,1512,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000768792;MQSB=0.638042;RPB=0.536532;SGB=35.3493;VDB=0.879559;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L749|1759|LOC_Os10g08920|protein_coding|CODING|LOC_Os10g08920.1|4|1) FN3839-S.SNP.10:4829298 chr10:004829298 0 W/4829298-4829298 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.783391;DP=3200;DP4=1414,1677,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.006875;MQB=5.11536e-09;MQSB=0.977562;RPB=0.818841;SGB=80.9724;VDB=0.979357;EFF=INTRON(MODIFIER||||1759|LOC_Os10g08920|protein_coding|CODING|LOC_Os10g08920.1|1|1) FN1344-S.SNP.10:4829318 chr10:004829318 0 W/4829318-4829318 FN1344-S Single Base Substitution G-A INTRON HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN4082-S.SNP.10:4842083 chr10:004842083 0 W/4842083-4842083 FN4082-S SNP G -> T AC=1;AN=182;BQB=0.57192;DP=3332;DP4=1606,1642,13,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.75614e-13;MQSB=0.995976;RPB=0.49308;SGB=81.2689;VDB=0.325172;EFF=UTR_3_PRIME(MODIFIER||1389||823|LOC_Os10g08940|protein_coding|CODING|LOC_Os10g08940.2|19|1),UTR_3_PRIME(MODIFIER||22||952|LOC_Os10g08940|protein_coding|CODING|LOC_Os10g08940.1|20|1) 703-4.SNP.10:4842684 chr10:004842684 0 W/4842684-4842684 703-4 Single Base Substitution A-T INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN1521-S.SNP.10:4856174 chr10:004856174 0 W/4856174-4856174 FN1521-S Single Base Substitution T-C INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1292-S.SNP.10:4856909 chr10:004856909 0 W/4856909-4856909 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN1383-S.SNP.10:4857883 chr10:004857883 0 W/4857883-4857883 FN1383-S Single Base Substitution G-C INTRON HOMO SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN3748-S.SNP.10:4860559 chr10:004860559 0 W/4860559-4860559 FN3748-S SNP T -> G AC=1;AN=190;BQB=0.977935;DP=2872;DP4=1276,1463,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91965e-05;MQSB=0.94809;RPB=0.729468;SGB=21.8853;VDB=0.592572;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.10:4877215 chr10:004877215 0 W/4877215-4877215 FN869-S Single Base Substitution A-C INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN1538-S.SNP.10:4878777 chr10:004878777 0 W/4878777-4878777 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3493-S.SNP.10:4879100 chr10:004879100 0 W/4879100-4879100 FN3493-S SNP A -> G AC=1;AN=184;BQB=0.990107;DP=2835;DP4=1426,1323,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=3.64507e-05;MQSB=0.421819;RPB=0.993797;SGB=53.2642;VDB=0.559918;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.10:4879393 chr10:004879393 0 W/4879393-4879393 FN2255-S SNP G -> A AC=1;AN=190;BQB=0.794199;DP=4909;DP4=2376,2130,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203707;MQB=3.15563e-07;MQSB=0.948349;RPB=0.374631;SGB=58.2031;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.10:4879439 chr10:004879439 0 W/4879439-4879439 FN3422-S SNP A -> G AC=1;AN=184;BQB=0.998737;DP=2776;DP4=1324,1371,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.28584e-06;MQSB=0.734929;RPB=0.977717;SGB=13.188;VDB=0.715037;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.10:4879600 chr10:004879600 0 W/4879600-4879600 FN2534-S SNP A -> G AC=2;AN=198;BQB=0.839876;DP=4198;DP4=1931,2064,19,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.28627e-11;MQSB=0.537023;RPB=0.999864;SGB=101.266;VDB=0.201614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.10:4879849 chr10:004879849 0 W/4879849-4879849 FN3806-S SNP T -> C AC=1;AN=190;BQB=0.995367;DP=2688;DP4=1278,1322,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34697e-08;MQSB=0.991487;RPB=0.440445;SGB=62.7569;VDB=0.378999;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.10:4885379 chr10:004885379 0 W/4885379-4885379 FN2742-S SNP C -> A AC=2;AN=200;BQB=0.835432;DP=4956;DP4=2300,2354,25,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.35463e-22;MQSB=0.9717;RPB=0.641877;SGB=192.42;VDB=0.638098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.10:4891910 chr10:004891910 0 W/4891910-4891910 FN2689-S SNP G -> C AC=1;AN=200;BQB=0.979501;DP=4781;DP4=2371,2155,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.21387e-08;MQSB=0.953013;RPB=0.511414;SGB=49.6594;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN956-S.SNP.10:4892263 chr10:004892263 0 W/4892263-4892263 FN956-S Single Base Substitution C-T INTERGENIC HET SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2373.SNP.10:4896881 chr10:004896881 0 W/4896881-4896881 FN2373 SNP G -> A AC=1;AN=192;BQB=0.520186;DP=4559;DP4=2048,2090,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000219346;MQB=2.36272e-09;MQSB=0.967607;RPB=0.994607;SGB=-9.12519;VDB=0.620149;EFF=INTERGENIC(MODIFIER||||||||||1) FN444-S.SNP.10:4899453 chr10:004899453 0 W/4899453-4899453 FN444-S Single Base Substitution A-C INTERGENIC HOMO SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN399-S.SNP.10:4913448 chr10:004913448 0 W/4913448-4913448 FN399-S Single Base Substitution T-C INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN505-S.SNP.10:4917210 chr10:004917210 0 W/4917210-4917210 FN505-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g09090 cytochrome P450, putative, expressed SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN3663-S.SNP.10:4917779 chr10:004917779 0 W/4917779-4917779 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.996682;DP=2338;DP4=1352,874,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.35207e-08;MQSB=0.43148;RPB=0.673877;SGB=53.6492;VDB=0.288356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.10:4927335 chr10:004927335 0 W/4927335-4927335 FN1549-S Single Base Substitution G-C INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN-163.SNP.10:4931503 chr10:004931503 0 W/4931503-4931503 FN-163 Single Base Substitution T-A INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2446.SNP.10:4933873 chr10:004933873 0 W/4933873-4933873 FN2446 SNP G -> A AC=1;AN=200;BQB=0.536895;DP=3112;DP4=1582,1110,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38891e-10;MQSB=0.594595;RPB=0.408449;SGB=-11.2947;VDB=0.039563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN-248 Single Base Substitution C-A INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN-273.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN-273 Single Base Substitution C-A INTERGENIC HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2085-S.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN2085-S SNP C -> A AC=2;AN=168;BQB=0.122268;DP=3601;DP4=2624,915,28,20;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0502638;MQB=0.0099126;MQSB=0;RPB=0.465044;SGB=-526.696;VDB=0.714943;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN2422 SNP C -> A AC=1;AN=200;BQB=0.672126;DP=5320;DP4=3029,2029,12,9;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0490602;MQB=0.000203915;MQSB=0;RPB=0.988576;SGB=14.3054;VDB=0.232036;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN244-S Single Base Substitution C-A INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3398-S.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN3398-S SNP C -> A AC=1;AN=184;BQB=0.653898;DP=3679;DP4=1727,1820,10,37;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0171242;MQB=5.24368e-20;MQSB=9.48514e-10;RPB=0.0258585;SGB=-1080.9;VDB=0.00339543;EFF=INTERGENIC(MODIFIER||||||||||1) FN3759-S.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN3759-S SNP C -> A AC=1;AN=190;BQB=0.388362;DP=3512;DP4=1813,1521,17,35;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.022779;MQB=3.55011e-16;MQSB=3.96894e-11;RPB=0.484521;SGB=-730.076;VDB=0.099857;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN418-S Single Base Substitution C-A INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_1017-1.SNP.10:4934277 chr10:004934277 0 W/4934277-4934277 FN_1017-1 Single Base Substitution C-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. W721-2-1.SNP.10:4935375 chr10:004935375 0 W/4935375-4935375 W721-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3509-S.SNP.10:4939065 chr10:004939065 0 W/4939065-4939065 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.202859;DP=3049;DP4=1378,1597,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0124631;MQB=0.00314595;MQSB=0.203941;RPB=0.00399868;SGB=26.0762;VDB=0.0183861;EFF=INTERGENIC(MODIFIER||||||||||1) FN4314-S.SNP.10:4940623 chr10:004940623 0 W/4940623-4940623 FN4314-S SNP T -> G AC=1;AN=170;BQB=0.953781;DP=2684;DP4=1347,1266,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.50415e-06;MQSB=0.668996;RPB=0.978383;SGB=34.5445;VDB=0.422291;EFF=INTRON(MODIFIER||||282|LOC_Os10g09140|protein_coding|CODING|LOC_Os10g09140.1|1|1) FN930-S.SNP.10:4944945 chr10:004944945 0 W/4944945-4944945 FN930-S Single Base Substitution T-C INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN700-S.SNP.10:4948247 chr10:004948247 0 W/4948247-4948247 FN700-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g09160 cytochrome P450, putative, expressed SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN3581-S.SNP.10:4948527 chr10:004948527 0 W/4948527-4948527 FN3581-S SNP A -> T AC=1;AN=190;BQB=0.948575;DP=3092;DP4=1446,1518,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.70281e-07;MQSB=0.999844;RPB=0.349706;SGB=44.5415;VDB=0.579002;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.10:4952446 chr10:004952446 0 W/4952446-4952446 FN2387 SNP C -> T AC=1;AN=192;BQB=0.755327;DP=5109;DP4=2031,2551,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37033e-14;MQSB=0.20794;RPB=0.437329;SGB=108.547;VDB=0.279042;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G169S|305|LOC_Os10g09170|protein_coding|CODING|LOC_Os10g09170.1|5|1) FN4184-S.SNP.10:4955723 chr10:004955723 0 W/4955723-4955723 FN4184-S SNP A -> G AC=2;AN=170;BQB=0.999869;DP=1288;DP4=164,1065,0,12;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.00310559;MQB=0.0078262;MQSB=2.77739e-23;RPB=0.287595;SGB=47.8722;VDB=0.782154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3722-S.SNP.10:4965685 chr10:004965685 0 W/4965685-4965685 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.995708;DP=2890;DP4=1361,1371,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.50631e-08;MQSB=0.957855;RPB=0.513231;SGB=49.0954;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.10:4968095 chr10:004968095 0 W/4968095-4968095 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.978955;DP=2951;DP4=1309,1518,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4496e-10;MQSB=0.908994;RPB=0.407877;SGB=53.8699;VDB=0.905503;EFF=INTRON(MODIFIER||||149|LOC_Os10g09200|protein_coding|CODING|LOC_Os10g09200.1|2|1) FN2662-S.SNP.10:4970186 chr10:004970186 0 W/4970186-4970186 FN2662-S SNP T -> G AC=1;AN=200;BQB=0.84378;DP=5020;DP4=2491,2296,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.21449e-12;MQSB=0.892471;RPB=0.0926246;SGB=-11.2947;VDB=0.154229;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.10:4971948 chr10:004971948 0 W/4971948-4971948 FN3662-S SNP A -> G AC=1;AN=190;BQB=0.83414;DP=3014;DP4=1360,1550,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58022e-07;MQSB=0.976432;RPB=0.287849;SGB=53.6492;VDB=0.272882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.10:4973558 chr10:004973558 0 W/4973558-4973558 FN1717-S SNP C -> G AC=1;AN=188;BQB=0;DP=3485;DP4=1173,1872,324,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00395773;MQSB=0.0229332;RPB=8.38995e-33;SGB=-2004.36;VDB=2.13234e-14;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.10:4975239 chr10:004975239 0 W/4975239-4975239 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.88776;DP=3216;DP4=1559,1539,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.80984e-08;MQSB=0.999961;RPB=0.994536;SGB=42.7914;VDB=0.727964;EFF=INTERGENIC(MODIFIER||||||||||1) FN998-S.SNP.10:4976293 chr10:004976293 0 W/4976293-4976293 FN998-S Single Base Substitution C-G INTERGENIC HET SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3693-S.SNP.10:4978286 chr10:004978286 0 W/4978286-4978286 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.942536;DP=2450;DP4=1010,1301,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0179592;MQB=1.47688e-05;MQSB=0.875674;RPB=0.999787;SGB=7.21887;VDB=0.0979924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.10:4979115 chr10:004979115 0 W/4979115-4979115 FN2640-S SNP C -> T AC=2;AN=200;BQB=0.832716;DP=4201;DP4=1730,2026,23,27;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000238039;MQB=1.47732e-20;MQSB=0.903688;RPB=0.986025;SGB=224.656;VDB=0.65882;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.10:4980890 chr10:004980890 0 W/4980890-4980890 FN2533-S SNP A -> T AC=1;AN=198;BQB=0.197003;DP=4170;DP4=1844,2072,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0961631;MQB=0.557055;MQSB=1.94848e-11;RPB=0.271631;SGB=29.3637;VDB=0.248694;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F1457I|1707|LOC_Os10g09220|protein_coding|CODING|LOC_Os10g09220.1|4|1) FN2356.SNP.10:4987162 chr10:004987162 0 W/4987162-4987162 FN2356 SNP T -> C AC=2;AN=192;BQB=0.999492;DP=4890;DP4=2183,2247,35,28;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00695297;MQB=1.18044e-14;MQSB=0.00935932;RPB=0.723548;SGB=146.874;VDB=0.973672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:4987903 chr10:004987903 0 W/4987903-4987903 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.940931;DP=2921;DP4=1439,1264,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000342349;MQB=8.47431e-05;MQSB=0.000102311;RPB=0.743941;SGB=49.0954;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.10:4990834 chr10:004990834 0 W/4990834-4990834 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3575-S.SNP.10:4992047 chr10:004992047 0 W/4992047-4992047 FN3575-S SNP T -> G AC=2;AN=188;BQB=0.999916;DP=3382;DP4=1518,1739,10,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.59042e-17;MQSB=0.777727;RPB=0.811323;SGB=130.758;VDB=0.252987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.10:4994746 chr10:004994746 0 W/4994746-4994746 FN2164-S SNP C -> T AC=2;AN=168;BQB=0.077411;DP=2455;DP4=1049,1319,11,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.16389e-10;MQSB=0.629292;RPB=0.519005;SGB=-11.0644;VDB=0.984904;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R130|136|LOC_Os10g09240|protein_coding|CODING|LOC_Os10g09240.1|1|1) FN3712-S.SNP.10:4997098 chr10:004997098 0 W/4997098-4997098 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.395106;DP=3469;DP4=1552,1739,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.54372e-06;MQSB=0.976106;RPB=0.362822;SGB=18.552;VDB=0.159996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.10:4999740 chr10:004999740 0 W/4999740-4999740 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.916589;DP=3360;DP4=1584,1686,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81685e-09;MQSB=0.998125;RPB=0.179934;SGB=66.8296;VDB=0.287158;EFF=INTRON(MODIFIER||||152|LOC_Os10g09250|protein_coding|CODING|LOC_Os10g09250.1|2|1) FN3667-S.SNP.10:5003382 chr10:005003382 0 W/5003382-5003382 FN3667-S SNP C -> A AC=1;AN=190;BQB=0.292239;DP=3084;DP4=1511,1461,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000332422;MQSB=0.722345;RPB=0.0614525;SGB=23.6597;VDB=0.0274092;EFF=INTERGENIC(MODIFIER||||||||||1) FN-387.SNP.10:5008290 chr10:005008290 0 W/5008290-5008290 FN-387 Single Base Substitution G-A INTERGENIC HET SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN670-S.SNP.10:5009846 chr10:005009846 0 W/5009846-5009846 FN670-S Single Base Substitution G-C INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2234-S.SNP.10:5011031 chr10:005011031 0 W/5011031-5011031 FN2234-S SNP G -> A AC=1;AN=190;BQB=0.903315;DP=5185;DP4=2612,2290,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14329e-09;MQSB=0.844985;RPB=0.604014;SGB=71.8647;VDB=0.26206;EFF=INTRON(MODIFIER||||147|LOC_Os10g09270|protein_coding|CODING|LOC_Os10g09270.1|3|1) FN2082-S.SNP.10:5011897 chr10:005011897 0 W/5011897-5011897 FN2082-S SNP G -> C AC=2;AN=168;BQB=0.0999682;DP=3138;DP4=1492,1559,27,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.1477e-23;MQSB=0.995391;RPB=0.0624091;SGB=-344.843;VDB=0.254178;EFF=INTRON(MODIFIER||||147|LOC_Os10g09270|protein_coding|CODING|LOC_Os10g09270.1|3|1) FN_N1-169-1.SNP.10:5014654 chr10:005014654 0 W/5014654-5014654 FN_N1-169-1 Single Base Substitution C-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1197-S.SNP.10:5018153 chr10:005018153 0 W/5018153-5018153 FN1197-S Single Base Substitution T-A INTRON HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN915-S.SNP.10:5020567 chr10:005020567 0 W/5020567-5020567 FN915-S Single Base Substitution C-T INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN4022-S.SNP.10:5021210 chr10:005021210 0 W/5021210-5021210 FN4022-S SNP A -> G AC=2;AN=168;BQB=0.750269;DP=2630;DP4=1393,1124,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.52358e-07;MQSB=0.871612;RPB=0.729681;SGB=58.7637;VDB=0.78622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E1022G|1371|LOC_Os10g09280|protein_coding|CODING|LOC_Os10g09280.1|5|1) FN-262.SNP.10:5024147 chr10:005024147 0 W/5024147-5024147 FN-262 Single Base Substitution G-C INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1028-S.SNP.10:5027993 chr10:005027993 0 W/5027993-5027993 FN1028-S Single Base Substitution A-C INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN724-S.SNP.10:5029192 chr10:005029192 0 W/5029192-5029192 FN724-S Single Base Substitution A-G INTRON HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN4094-S.SNP.10:5029651 chr10:005029651 0 W/5029651-5029651 FN4094-S SNP G -> C AC=1;AN=182;BQB=0.886766;DP=3067;DP4=1488,1455,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=2.51569e-07;MQSB=0.903901;RPB=0.471852;SGB=48.6223;VDB=0.162982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T36S|142|LOC_Os10g09300|protein_coding|CODING|LOC_Os10g09300.1|1|1) FN2375.SNP.10:5033727 chr10:005033727 0 W/5033727-5033727 FN2375 SNP C -> A AC=1;AN=192;BQB=0.954427;DP=4734;DP4=2422,2072,11,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.88549e-08;MQSB=0.995817;RPB=0.961292;SGB=28.9139;VDB=0.882335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E359D|693|LOC_Os10g09310|protein_coding|CODING|LOC_Os10g09310.1|4|1) FN-314.SNP.10:5036937 chr10:005036937 0 W/5036937-5036937 FN-314 Single Base Substitution G-A INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN3571-S.SNP.10:5039510 chr10:005039510 0 W/5039510-5039510 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.508224;DP=3767;DP4=1535,2115,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0353066;MQB=0.601944;MQSB=0.656913;RPB=0.556791;SGB=71.6954;VDB=0.932636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.10:5040174 chr10:005040174 0 W/5040174-5040174 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.302809;DP=5194;DP4=2571,2281,11,17;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000962649;MQB=8.75389e-15;MQSB=0.831388;RPB=0.847127;SGB=90.7419;VDB=0.291046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.10:5040174 chr10:005040174 0 W/5040174-5040174 FN3657-S SNP C -> A AC=2;AN=190;BQB=0.798169;DP=2864;DP4=1582,1143,20,4;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00174581;MQB=1.02949e-09;MQSB=0.866713;RPB=0.608312;SGB=46.6446;VDB=0.863619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.10:5040174 chr10:005040174 0 W/5040174-5040174 FN3921-S SNP C -> A AC=1;AN=158;BQB=0.463844;DP=2566;DP4=1419,1019,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00233827;MQB=0.000739309;MQSB=0.40984;RPB=0.990681;SGB=-2.02218;VDB=0.955982;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.10:5040174 chr10:005040174 0 W/5040174-5040174 FN706-S Single Base Substitution C-A INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN4105-S.SNP.10:5047009 chr10:005047009 0 W/5047009-5047009 FN4105-S SNP C -> T AC=1;AN=182;BQB=0.832906;DP=2751;DP4=1419,1277,4,3;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.000363504;MQB=0.00617749;MQSB=0.52269;RPB=0.823412;SGB=26.0691;VDB=0.939413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S145F|1453|LOC_Os10g09350|protein_coding|CODING|LOC_Os10g09350.1|2|1) FN1188-S.SNP.10:5048996 chr10:005048996 0 W/5048996-5048996 FN1188-S Single Base Substitution G-T INTRON HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN4221-S.SNP.10:5060227 chr10:005060227 0 W/5060227-5060227 FN4221-S SNP C -> G AC=2;AN=170;BQB=0.963227;DP=2098;DP4=950,1076,3,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.66027e-09;MQSB=0.724265;RPB=0.649283;SGB=61.2001;VDB=0.0885924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.10:5072434 chr10:005072434 0 W/5072434-5072434 FN1490-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN1650-S.SNP.10:5074124 chr10:005074124 0 W/5074124-5074124 FN1650-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g09400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2171-S.SNP.10:5080239 chr10:005080239 0 W/5080239-5080239 FN2171-S SNP T -> C AC=2;AN=168;BQB=0.0494615;DP=3680;DP4=1904,1722,21,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.49679e-18;MQSB=0.932441;RPB=0.618192;SGB=-48.0427;VDB=0.226276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.10:5085572 chr10:005085572 0 W/5085572-5085572 FN2453 SNP G -> A AC=1;AN=200;BQB=0.875741;DP=4284;DP4=1886,2162,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91883e-12;MQSB=0.42167;RPB=0.982276;SGB=95.7111;VDB=0.442237;EFF=INTRON(MODIFIER||||580|LOC_Os10g09430|protein_coding|CODING|LOC_Os10g09430.1|1|1) W252-6-1.SNP.10:5090691 chr10:005090691 0 W/5090691-5090691 W252-6-1 Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g09440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2561-S.SNP.10:5091928 chr10:005091928 0 W/5091928-5091928 FN2561-S SNP C -> G,A AC=6,7;AN=198;BQB=0.842217;DP=4722;DP4=1995,1831,568,113;HOB=0.0620855;ICB=0.169885;MQ=38;MQ0F=0.090216;MQB=0;MQSB=5.34634e-17;RPB=0;SGB=-2675.92;VDB=7.17221e-27;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tCt|C685S|1637|LOC_Os10g09440|protein_coding|CODING|LOC_Os10g09440.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C685F|1637|LOC_Os10g09440|protein_coding|CODING|LOC_Os10g09440.1|5|2) FN2204-S.SNP.10:5092186 chr10:005092186 0 W/5092186-5092186 FN2204-S SNP C -> A AC=1;AN=190;BQB=6.52296e-07;DP=4721;DP4=2107,2275,26,37;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.128786;MQB=5.06658e-09;MQSB=0;RPB=0.363986;SGB=-1812.66;VDB=0.999119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R599M|1637|LOC_Os10g09440|protein_coding|CODING|LOC_Os10g09440.1|5|1) FN915-S.SNP.10:5095032 chr10:005095032 0 W/5095032-5095032 FN915-S Single Base Substitution A-G INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. W591-4-1.SNP.10:5100969 chr10:005100969 0 W/5100969-5100969 W591-4-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g09460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1430, Mutant_ID: W591-4-1, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN-261.SNP.10:5102955 chr10:005102955 0 W/5102955-5102955 FN-261 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g09460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN3691-S.SNP.10:5110312 chr10:005110312 0 W/5110312-5110312 FN3691-S SNP G -> T AC=1;AN=190;BQB=0.786824;DP=2884;DP4=1505,1235,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.71596e-13;MQSB=0.674123;RPB=0.804778;SGB=90.0802;VDB=0.155328;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E936*|987|LOC_Os10g09470|protein_coding|CODING|LOC_Os10g09470.1|3|1) FN3777-S.SNP.10:5112807 chr10:005112807 0 W/5112807-5112807 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.755996;DP=3065;DP4=1598,1369,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.93066e-05;MQSB=0.947104;RPB=0.950712;SGB=28.9929;VDB=0.236165;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S528|627|LOC_Os10g09480|protein_coding|CODING|LOC_Os10g09480.1|2|1) FN2083-S.SNP.10:5113618 chr10:005113618 0 W/5113618-5113618 FN2083-S SNP G -> T AC=1;AN=168;BQB=0.42794;DP=3522;DP4=1431,1968,50,58;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0159001;MQB=7.10301e-37;MQSB=3.04717e-05;RPB=0.825152;SGB=-950.46;VDB=0.99969;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.10:5113859 chr10:005113859 0 W/5113859-5113859 FN728-S Single Base Substitution A-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN4077-S.SNP.10:5117760 chr10:005117760 0 W/5117760-5117760 FN4077-S SNP G -> T AC=2;AN=182;BQB=0.925863;DP=1873;DP4=703,1011,7,15;HOB=0.0217365;ICB=0.494567;MQ=39;MQ0F=0.0229578;MQB=7.86591e-06;MQSB=3.82103e-07;RPB=0.158723;SGB=67.2255;VDB=0.130153;EFF=INTERGENIC(MODIFIER||||||||||1) FN4077-S.SNP.10:5117761 chr10:005117761 0 W/5117761-5117761 FN4077-S SNP C -> G AC=2;AN=182;BQB=0.542424;DP=1880;DP4=738,1028,7,15;HOB=0.0217365;ICB=0.494567;MQ=39;MQ0F=0.0234043;MQB=4.81835e-05;MQSB=6.57243e-05;RPB=0.388715;SGB=93.7308;VDB=0.35007;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.10:5120432 chr10:005120432 0 W/5120432-5120432 FN1758-S SNP G -> A AC=1;AN=188;BQB=0.0442512;DP=2178;DP4=980,1146,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0606061;MQB=0.258513;MQSB=1.31879e-07;RPB=0.216306;SGB=-34.6243;VDB=0.723817;EFF=INTRON(MODIFIER||||892|LOC_Os10g09490|protein_coding|CODING|LOC_Os10g09490.1|1|1) FN3448-S.SNP.10:5121470 chr10:005121470 0 W/5121470-5121470 FN3448-S SNP G -> T AC=2;AN=184;BQB=0.895979;DP=3231;DP4=1240,1889,12,14;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0102136;MQB=0.0143933;MQSB=1.96227e-07;RPB=0.874405;SGB=112.047;VDB=0.942389;EFF=INTRON(MODIFIER||||892|LOC_Os10g09490|protein_coding|CODING|LOC_Os10g09490.1|3|1) FN1462-S.SNP.10:5128295 chr10:005128295 0 W/5128295-5128295 FN1462-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN276-S.SNP.10:5135605 chr10:005135605 0 W/5135605-5135605 FN276-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g09510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN1403-S.SNP.10:5139146 chr10:005139146 0 W/5139146-5139146 FN1403-S Single Base Substitution G-T INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN3371-S.SNP.10:5139352 chr10:005139352 0 W/5139352-5139352 FN3371-S SNP C -> A AC=1;AN=184;BQB=0.869738;DP=3032;DP4=1369,1520,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000659631;MQB=1.17735e-05;MQSB=0.00522757;RPB=0.988423;SGB=53.2642;VDB=0.886288;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.10:5140212 chr10:005140212 0 W/5140212-5140212 FN2331 SNP C -> A AC=2;AN=192;BQB=0.637791;DP=4849;DP4=2345,2223,9,20;HOB=0.0206163;ICB=0.494846;MQ=22;MQ0F=0.249948;MQB=0.325664;MQSB=0;RPB=0.793329;SGB=93.2452;VDB=0.569315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.10:5143103 chr10:005143103 0 W/5143103-5143103 FN2560-S SNP T -> A AC=2;AN=198;BQB=0.962981;DP=3788;DP4=1908,1667,11,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000527983;MQB=9.78657e-13;MQSB=0.929839;RPB=0.459902;SGB=17.325;VDB=0.13605;EFF=STOP_GAINED(HIGH|NONSENSE|Aaa/Taa|K288*|531|LOC_Os10g09529|protein_coding|CODING|LOC_Os10g09529.1|7|1);LOF=(LOC_Os10g09529|LOC_Os10g09529|1|1.00);NMD=(LOC_Os10g09529|LOC_Os10g09529|1|1.00) FN3394-S.SNP.10:5146142 chr10:005146142 0 W/5146142-5146142 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.303331;DP=3434;DP4=1489,1828,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.88438e-09;MQSB=0.187562;RPB=0.479365;SGB=45.9712;VDB=0.608458;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R172H|531|LOC_Os10g09529|protein_coding|CODING|LOC_Os10g09529.1|4|1) FN1292-S.SNP.10:5146685 chr10:005146685 0 W/5146685-5146685 FN1292-S Single Base Substitution T-C INTRON HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3480-S.SNP.10:5149521 chr10:005149521 0 W/5149521-5149521 FN3480-S SNP C -> T AC=2;AN=184;BQB=0.871299;DP=3932;DP4=2009,1737,32,30;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.90694e-29;MQSB=0.0883508;RPB=0.199769;SGB=269.319;VDB=0.141767;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.10:5149587 chr10:005149587 0 W/5149587-5149587 FN2560-S SNP A -> T AC=1;AN=198;BQB=0.931565;DP=3497;DP4=1440,1536,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000571919;MQB=0.0038248;MQSB=0.139641;RPB=0.774162;SGB=14.9842;VDB=0.973779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3539-S.SNP.10:5150704 chr10:005150704 0 W/5150704-5150704 FN3539-S SNP G -> A AC=1;AN=188;BQB=0.193763;DP=3188;DP4=1468,1645,3,20;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0401506;MQB=5.68576e-09;MQSB=0.243047;RPB=0.857109;SGB=-148.887;VDB=0.998657;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.10:5153879 chr10:005153879 0 W/5153879-5153879 FN838-S Single Base Substitution G-A INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN838-S.SNP.10:5153880 chr10:005153880 0 W/5153880-5153880 FN838-S Single Base Substitution T-C INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2637-S.SNP.10:5155337 chr10:005155337 0 W/5155337-5155337 FN2637-S SNP T -> C AC=2;AN=200;BQB=0.998014;DP=5152;DP4=2221,2696,14,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.49367e-25;MQSB=0.914805;RPB=0.979123;SGB=144.819;VDB=0.339557;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.10:5163401 chr10:005163401 0 W/5163401-5163401 FN3871-S SNP A -> T AC=1;AN=158;BQB=0.852602;DP=2147;DP4=1145,908,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.67508e-08;MQSB=0.939176;RPB=0.226355;SGB=68.9144;VDB=0.537165;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.10:5172562 chr10:005172562 0 W/5172562-5172562 FN_949-1 Single Base Substitution G-A HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN-286.SNP.10:5175326 chr10:005175326 0 W/5175326-5175326 FN-286 Single Base Substitution T-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2279-S.SNP.10:5175766 chr10:005175766 0 W/5175766-5175766 FN2279-S SNP C -> G AC=1;AN=190;BQB=0.981027;DP=4594;DP4=2233,2131,25,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000217675;MQB=7.96669e-16;MQSB=0.0297126;RPB=0.792146;SGB=69.6295;VDB=0.0874325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.10:5175955 chr10:005175955 0 W/5175955-5175955 FN2398 SNP C -> T AC=2;AN=200;BQB=0.971671;DP=4429;DP4=2182,2007,23,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.35534e-18;MQSB=0.799803;RPB=0.938157;SGB=73.7728;VDB=0.451241;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.10:5180569 chr10:005180569 0 W/5180569-5180569 FN1302-S Single Base Substitution G-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2696-S.SNP.10:5184816 chr10:005184816 0 W/5184816-5184816 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.960142;DP=4556;DP4=2307,2044,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41621e-08;MQSB=0.821855;RPB=0.834354;SGB=24.2746;VDB=0.889764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.10:5185829 chr10:005185829 0 W/5185829-5185829 FN1133-S Single Base Substitution T-A INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN4311-S.SNP.10:5189266 chr10:005189266 0 W/5189266-5189266 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.930523;DP=2402;DP4=992,1317,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.92315e-06;MQSB=0.843247;RPB=0.900394;SGB=21.1076;VDB=0.588772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.10:5193610 chr10:005193610 0 W/5193610-5193610 FN3310-S SNP T -> G AC=1;AN=184;BQB=0.730805;DP=2668;DP4=1104,1362,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.0462e-08;MQSB=0.993255;RPB=0.848677;SGB=71.3514;VDB=0.535571;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcC|A857|1853|LOC_Os10g09610|protein_coding|CODING|LOC_Os10g09610.1|2|1) FN536-S.SNP.10:5195541 chr10:005195541 0 W/5195541-5195541 FN536-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g09610 retrotransposon protein, putative, unclassified, expressed SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN427-S.SNP.10:5197354 chr10:005197354 0 W/5197354-5197354 FN427-S Single Base Substitution G-C INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1023-S.SNP.10:5198148 chr10:005198148 0 W/5198148-5198148 FN1023-S Single Base Substitution G-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN-162.SNP.10:5202116 chr10:005202116 0 W/5202116-5202116 FN-162 Single Base Substitution T-A INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1532-S.SNP.10:5203955 chr10:005203955 0 W/5203955-5203955 FN1532-S Single Base Substitution T-C INTRON Homo SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN4037-S.SNP.10:5206408 chr10:005206408 0 W/5206408-5206408 FN4037-S SNP C -> T AC=1;AN=168;BQB=0.995598;DP=2396;DP4=1231,1032,8,1;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0350584;MQB=0.979324;MQSB=3.71728e-33;RPB=0.891033;SGB=34.4498;VDB=0.730881;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.10:5208843 chr10:005208843 0 W/5208843-5208843 FN836-S Single Base Substitution T-A INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1297-S.SNP.10:5213009 chr10:005213009 0 W/5213009-5213009 FN1297-S Single Base Substitution G-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3897-S.SNP.10:5217317 chr10:005217317 0 W/5217317-5217317 FN3897-S SNP G -> A AC=1;AN=158;BQB=0.778548;DP=2426;DP4=1132,1180,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.27919e-14;MQSB=0.996822;RPB=0.999127;SGB=90.7616;VDB=0.587906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3897-S.SNP.10:5217318 chr10:005217318 0 W/5217318-5217318 FN3897-S SNP C -> T AC=1;AN=158;BQB=0.491347;DP=2424;DP4=1105,1194,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.058e-14;MQSB=0.998098;RPB=0.980584;SGB=90.7616;VDB=0.581891;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.10:5218310 chr10:005218310 0 W/5218310-5218310 FN-93 Single Base Substitution T-A INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2493.SNP.10:5218310 chr10:005218310 0 W/5218310-5218310 FN2493 SNP T -> A AC=2;AN=200;BQB=0.84634;DP=4105;DP4=2035,1796,12,21;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=7.22709e-11;MQSB=0.133205;RPB=0.913248;SGB=71.1676;VDB=0.338419;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.10:5218310 chr10:005218310 0 W/5218310-5218310 FN3287-S SNP T -> A AC=1;AN=184;BQB=0.931558;DP=2681;DP4=1463,1107,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=7.00877e-10;MQSB=0.541155;RPB=0.915567;SGB=85.0529;VDB=0.126836;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.10:5218310 chr10:005218310 0 W/5218310-5218310 FN4147-S SNP T -> A AC=2;AN=170;BQB=0.999697;DP=2040;DP4=1120,846,8,6;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0;MQB=0.000166469;MQSB=0.905335;RPB=0.825165;SGB=56.7575;VDB=0.797241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.10:5221391 chr10:005221391 0 W/5221391-5221391 FN2426 SNP G -> C AC=1;AN=200;BQB=0.801846;DP=4077;DP4=1924,1888,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.20855e-10;MQSB=0.99384;RPB=0.929818;SGB=32.0901;VDB=0.413586;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||174|LOC_Os10g09650|protein_coding|CODING|LOC_Os10g09650.1|2|1),INTRON(MODIFIER||||174|LOC_Os10g09650|protein_coding|CODING|LOC_Os10g09650.1|1|1);LOF=(LOC_Os10g09650|LOC_Os10g09650|1|1.00) FN3472-S.SNP.10:5222211 chr10:005222211 0 W/5222211-5222211 FN3472-S SNP T -> C AC=1;AN=184;BQB=0.737974;DP=3335;DP4=1531,1595,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.88485e-10;MQSB=0.680904;RPB=0.218089;SGB=45.9712;VDB=0.672694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.10:5226465 chr10:005226465 0 W/5226465-5226465 FN1175-S Single Base Substitution C-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN_830-6-1.SNP.10:5228481 chr10:005228481 0 W/5228481-5228481 FN_830-6-1 Single Base Substitution T-A Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1619-S.SNP.10:5230666 chr10:005230666 0 W/5230666-5230666 FN1619-S Single Base Substitution C-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2768-S.SNP.10:5230712 chr10:005230712 0 W/5230712-5230712 FN2768-S SNP C -> T AC=1;AN=186;BQB=0.995734;DP=3598;DP4=1728,1663,8,14;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.11222e-12;MQSB=0.919615;RPB=0.972499;SGB=42.3199;VDB=0.971531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.10:5231055 chr10:005231055 0 W/5231055-5231055 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.960578;DP=2710;DP4=1293,1328,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.3094e-05;MQSB=0.999284;RPB=0.84709;SGB=30.6558;VDB=0.215483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3418-S.SNP.10:5231056 chr10:005231056 0 W/5231056-5231056 FN3418-S SNP T -> C AC=1;AN=184;BQB=0.992345;DP=2714;DP4=1276,1299,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.04237e-06;MQSB=0.982409;RPB=0.614088;SGB=21.6609;VDB=0.254481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.10:5236666 chr10:005236666 0 W/5236666-5236666 FN1325-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g09684 expressed protein SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1325-S.SNP.10:5238184 chr10:005238184 0 W/5238184-5238184 FN1325-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g09690 OsWAK109 - OsWAK receptor-like protein kinase, expressed SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1295-S.SNP.10:5238995 chr10:005238995 0 W/5238995-5238995 FN1295-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2241-S.SNP.10:5239217 chr10:005239217 0 W/5239217-5239217 FN2241-S SNP G -> A AC=1;AN=190;BQB=0.710169;DP=5041;DP4=2050,2677,13,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000198373;MQB=4.60545e-08;MQSB=0.00254063;RPB=0.701928;SGB=26.2136;VDB=0.991617;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.10:5239500 chr10:005239500 0 W/5239500-5239500 W464-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN2426.SNP.10:5245832 chr10:005245832 0 W/5245832-5245832 FN2426 SNP C -> A AC=2;AN=200;BQB=0.852326;DP=4846;DP4=2321,2269,24,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.15819e-34;MQSB=0.982092;RPB=0.989943;SGB=75.3019;VDB=0.490448;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.10:5248719 chr10:005248719 0 W/5248719-5248719 FN355-S Single Base Substitution G-A INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN1536-S.SNP.10:5254886 chr10:005254886 0 W/5254886-5254886 FN1536-S Single Base Substitution A-G INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN4103-S.SNP.10:5255825 chr10:005255825 0 W/5255825-5255825 FN4103-S SNP T -> C AC=1;AN=182;BQB=0.870467;DP=2710;DP4=1351,1301,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000181328;MQSB=0.987279;RPB=0.915132;SGB=30.5793;VDB=0.31234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.10:5256035 chr10:005256035 0 W/5256035-5256035 FN1409-S Single Base Substitution C-T INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1409-S.SNP.10:5256037 chr10:005256037 0 W/5256037-5256037 FN1409-S Single Base Substitution A-G INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-316.SNP.10:5263382 chr10:005263382 0 W/5263382-5263382 FN-316 Single Base Substitution T-C INTERGENIC HOMO SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN660-S.SNP.10:5264877 chr10:005264877 0 W/5264877-5264877 FN660-S Single Base Substitution G-C INTERGENIC HET SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN1677-S.SNP.10:5268249 chr10:005268249 0 W/5268249-5268249 FN1677-S SNP A -> T AC=1;AN=188;BQB=0.751963;DP=3455;DP4=2087,1334,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.26762e-09;MQSB=0.909938;RPB=0.99428;SGB=11.7114;VDB=0.524809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.10:5269293 chr10:005269293 0 W/5269293-5269293 FN2557-S SNP A -> C AC=2;AN=198;BQB=0.998084;DP=3872;DP4=1539,1994,14,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.15411e-14;MQSB=0.921885;RPB=0.743118;SGB=104.861;VDB=0.152148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Gct|S128A|183|LOC_Os10g09740|protein_coding|CODING|LOC_Os10g09740.1|2|1) FN_N1-213-1.SNP.10:5269428 chr10:005269428 0 W/5269428-5269428 FN_N1-213-1 Single Base Substitution C-T HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN320-S.SNP.10:5271242 chr10:005271242 0 W/5271242-5271242 FN320-S Single Base Substitution G-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3487-S.SNP.10:5282663 chr10:005282663 0 W/5282663-5282663 FN3487-S SNP T -> A AC=1;AN=184;BQB=0.299371;DP=2723;DP4=1185,1321,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0672053;MQB=0.889868;MQSB=9.25964e-07;RPB=0.662306;SGB=2.23696;VDB=0.439122;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.10:5299571 chr10:005299571 0 W/5299571-5299571 FN419-S Single Base Substitution G-A INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN1424-S.SNP.10:5304480 chr10:005304480 0 W/5304480-5304480 FN1424-S Single Base Substitution C-T INTRON HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3511-S.SNP.10:5306053 chr10:005306053 0 W/5306053-5306053 FN3511-S SNP G -> T AC=1;AN=188;BQB=0.591896;DP=2719;DP4=1292,1321,2,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00727487;MQSB=0.954522;RPB=0.66484;SGB=26.2637;VDB=0.324191;EFF=INTRON(MODIFIER||||1264|LOC_Os10g09810|protein_coding|CODING|LOC_Os10g09810.1|6|1) FN1434-S.SNP.10:5306985 chr10:005306985 0 W/5306985-5306985 FN1434-S Single Base Substitution C-G INTRON HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2469.SNP.10:5317332 chr10:005317332 0 W/5317332-5317332 FN2469 SNP C -> A AC=1;AN=200;BQB=0.972919;DP=4452;DP4=2084,2070,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99783e-11;MQSB=0.912867;RPB=0.953211;SGB=17.5158;VDB=0.276277;EFF=INTRON(MODIFIER||||496|LOC_Os10g09820|protein_coding|CODING|LOC_Os10g09820.1|2|1) FN2469.SNP.10:5317333 chr10:005317333 0 W/5317333-5317333 FN2469 SNP A -> T AC=1;AN=200;BQB=0.0912372;DP=4457;DP4=2080,1957,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39903e-12;MQSB=0.798043;RPB=0.987306;SGB=81.8956;VDB=0.315241;EFF=INTRON(MODIFIER||||496|LOC_Os10g09820|protein_coding|CODING|LOC_Os10g09820.1|2|1) FN3462-S.SNP.10:5322024 chr10:005322024 0 W/5322024-5322024 FN3462-S SNP A -> T AC=1;AN=184;BQB=0.946904;DP=2818;DP4=1400,1347,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17647e-06;MQSB=0.850659;RPB=0.972215;SGB=39.699;VDB=0.419414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.10:5324440 chr10:005324440 0 W/5324440-5324440 FN2485 SNP G -> A AC=2;AN=200;BQB=0.723317;DP=4606;DP4=1742,2612,17,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.27617e-27;MQSB=0.795806;RPB=0.926283;SGB=152.03;VDB=0.324441;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.10:5324473 chr10:005324473 0 W/5324473-5324473 FN3890-S SNP T -> C AC=1;AN=158;BQB=0.982792;DP=2470;DP4=1066,1269,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.10203e-09;MQSB=0.975741;RPB=0.0914751;SGB=50.9207;VDB=0.124926;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.10:5330067 chr10:005330067 0 W/5330067-5330067 FN3518-S SNP T -> A AC=1;AN=188;BQB=0.957093;DP=2716;DP4=1239,1349,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63365e-10;MQSB=0.939054;RPB=0.933913;SGB=85.3253;VDB=0.752673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.10:5331752 chr10:005331752 0 W/5331752-5331752 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.937874;DP=2479;DP4=1154,1273,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.5243e-05;MQSB=0.85835;RPB=0.656949;SGB=26.2637;VDB=0.219617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.10:5340287 chr10:005340287 0 W/5340287-5340287 FN3987-S SNP C -> A AC=1;AN=168;BQB=0.99806;DP=2274;DP4=1059,1088,8,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.25765e-15;MQSB=0.996903;RPB=0.998705;SGB=82.7794;VDB=0.269465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.10:5342253 chr10:005342253 0 W/5342253-5342253 FN2139-S SNP A -> T AC=1;AN=168;BQB=0.0236303;DP=3907;DP4=2080,1775,20,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.39041e-10;MQSB=0.999947;RPB=0.849932;SGB=-151.471;VDB=0.492017;EFF=INTRON(MODIFIER||||347|LOC_Os10g09870|protein_coding|CODING|LOC_Os10g09870.2|6|1),INTRON(MODIFIER||||347|LOC_Os10g09870|protein_coding|CODING|LOC_Os10g09870.4|6|1),INTRON(MODIFIER||||348|LOC_Os10g09870|protein_coding|CODING|LOC_Os10g09870.1|6|1) FN2684-S.SNP.10:5348307 chr10:005348307 0 W/5348307-5348307 FN2684-S SNP T -> G AC=1;AN=200;BQB=0.786282;DP=4735;DP4=2323,2243,11,11;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0593453;MQB=0.508094;MQSB=9.00088e-21;RPB=0.779121;SGB=95.7111;VDB=0.723218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:5356943 chr10:005356943 0 W/5356943-5356943 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.0252601;DP=4748;DP4=2079,2407,126,102;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00758214;MQB=0;MQSB=0.422474;RPB=1.14339e-09;SGB=-3283.33;VDB=2.09469e-10;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.10:5360589 chr10:005360589 0 W/5360589-5360589 FN564-S Single Base Substitution G-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2375.SNP.10:5373334 chr10:005373334 0 W/5373334-5373334 FN2375 SNP C -> A AC=1;AN=192;BQB=0.0621381;DP=5289;DP4=2581,2487,11,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.8881e-09;MQSB=0.68538;RPB=0.899706;SGB=-14.7687;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1395-S.SNP.10:5382120 chr10:005382120 0 W/5382120-5382120 FN1395-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN2216-S.SNP.10:5383927 chr10:005383927 0 W/5383927-5383927 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.348511;DP=4815;DP4=1946,2377,8,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23482e-11;MQSB=0.968645;RPB=0.03161;SGB=21.2038;VDB=0.487422;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN1453-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2438.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN2438 SNP G -> A AC=2;AN=200;BQB=0.910818;DP=4344;DP4=1984,2103,22,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46454e-22;MQSB=0.99481;RPB=0.966355;SGB=54.4347;VDB=0.502158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN2597-S SNP G -> A AC=2;AN=198;BQB=0.471768;DP=4183;DP4=1915,2047,12,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.46157e-12;MQSB=0.970612;RPB=0.917046;SGB=86.8856;VDB=0.200517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3370-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN3370-S SNP G -> A AC=2;AN=184;BQB=0.336151;DP=2732;DP4=1109,1528,7,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.08983e-07;MQSB=0.662073;RPB=0.978345;SGB=89.4385;VDB=0.442082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3601-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN3601-S SNP G -> A AC=1;AN=190;BQB=0.130497;DP=2612;DP4=1135,1381,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01047e-05;MQSB=0.434967;RPB=0.86025;SGB=57.4238;VDB=0.976036;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN4234-S SNP G -> A AC=1;AN=168;BQB=0.979133;DP=2202;DP4=940,1205,2,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000446826;MQSB=0.48051;RPB=0.370795;SGB=21.2191;VDB=0.311141;EFF=INTERGENIC(MODIFIER||||||||||1) FN506-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN506-S Single Base Substitution G-A INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN807-S.SNP.10:5384461 chr10:005384461 0 W/5384461-5384461 FN807-S Single Base Substitution G-A INTERGENIC HOMO SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3462-S.SNP.10:5387746 chr10:005387746 0 W/5387746-5387746 FN3462-S SNP A -> G AC=1;AN=184;BQB=0.987283;DP=2932;DP4=1568,1235,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.61843e-05;MQSB=0.990571;RPB=0.958591;SGB=26.1347;VDB=0.783783;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L358|1085|LOC_Os10g09940|protein_coding|CODING|LOC_Os10g09940.1|4|1) FN1543-S.SNP.10:5392076 chr10:005392076 0 W/5392076-5392076 FN1543-S Single Base Substitution C-A INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1543-S.SNP.10:5392077 chr10:005392077 0 W/5392077-5392077 FN1543-S Single Base Substitution C-T INTERGENIC Homo SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1703-S.SNP.10:5392997 chr10:005392997 0 W/5392997-5392997 FN1703-S SNP A -> G AC=2;AN=188;BQB=0.483048;DP=3003;DP4=1503,1449,11,13;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.100233;MQB=0.112816;MQSB=0;RPB=0.190752;SGB=-39.1914;VDB=0.49229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.10:5393004 chr10:005393004 0 W/5393004-5393004 FN1703-S SNP A -> T AC=2;AN=188;BQB=0.166267;DP=3074;DP4=1544,1486,10,15;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.127521;MQB=0.283073;MQSB=0;RPB=0.442642;SGB=-39.6481;VDB=0.711946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.10:5405550 chr10:005405550 0 W/5405550-5405550 FN1546-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1488-S.SNP.10:5407042 chr10:005407042 0 W/5407042-5407042 FN1488-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g09970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1496-S.SNP.10:5407608 chr10:005407608 0 W/5407608-5407608 FN1496-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN940-S.SNP.10:5407845 chr10:005407845 0 W/5407845-5407845 FN940-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-348.SNP.10:5412339 chr10:005412339 0 W/5412339-5412339 FN-348 Single Base Substitution A-G INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN2792-S.SNP.10:5419574 chr10:005419574 0 W/5419574-5419574 FN2792-S SNP G -> A AC=2;AN=198;BQB=0.123497;DP=4845;DP4=1931,2696,30,12;HOB=0.019998;ICB=0.495001;MQ=18;MQ0F=0.406398;MQB=0.000192829;MQSB=0;RPB=0.706787;SGB=94.2223;VDB=0.0452982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.10:5422742 chr10:005422742 0 W/5422742-5422742 FN3386-S SNP T -> C AC=1;AN=184;BQB=0.63935;DP=3021;DP4=1417,1499,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.29172e-07;MQSB=0.520726;RPB=0.466784;SGB=66.8296;VDB=0.492772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.10:5423284 chr10:005423284 0 W/5423284-5423284 FN3796-S SNP G -> A AC=1;AN=190;BQB=0.754662;DP=2829;DP4=1448,1262,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000706964;MQB=5.17862e-08;MQSB=0.521393;RPB=0.952783;SGB=57.4238;VDB=0.972784;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.10:5433969 chr10:005433969 0 W/5433969-5433969 FN-156 Single Base Substitution G-C INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2612-S.SNP.10:5436806 chr10:005436806 0 W/5436806-5436806 FN2612-S SNP T -> C AC=1;AN=198;BQB=0.900173;DP=4020;DP4=1823,1879,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26522e-10;MQSB=0.999346;RPB=0.321669;SGB=-10.8602;VDB=0.745742;EFF=INTRON(MODIFIER||||253|LOC_Os10g10020|protein_coding|CODING|LOC_Os10g10020.1|1|1) FN401-S.SNP.10:5445086 chr10:005445086 0 W/5445086-5445086 FN401-S Single Base Substitution T-A INTRON HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN2110-S.SNP.10:5451362 chr10:005451362 0 W/5451362-5451362 FN2110-S SNP C -> T AC=2;AN=168;BQB=0.276072;DP=3820;DP4=2035,1722,31,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.86165e-21;MQSB=0.999044;RPB=0.873972;SGB=-56.0112;VDB=0.164756;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.10:5451874 chr10:005451874 0 W/5451874-5451874 FN-96 Single Base Substitution T-C INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN2174-S.SNP.10:5452793 chr10:005452793 0 W/5452793-5452793 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.00947876;DP=3482;DP4=1713,1726,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00598799;MQSB=0.974615;RPB=0.704414;SGB=-122.928;VDB=0.904414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.10:5453929 chr10:005453929 0 W/5453929-5453929 FN2426 SNP A -> G AC=1;AN=200;BQB=0.906494;DP=4407;DP4=2247,1771,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.07166e-06;MQSB=0.955646;RPB=0.400289;SGB=4.67442;VDB=0.423298;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.10:5457133 chr10:005457133 0 W/5457133-5457133 FN-89 Single Base Substitution G-A INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2090-S.SNP.10:5459556 chr10:005459556 0 W/5459556-5459556 FN2090-S SNP A -> G AC=1;AN=168;BQB=0.129795;DP=4386;DP4=2118,2234,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.10168e-06;MQSB=0.957368;RPB=0.945332;SGB=-87.7854;VDB=0.847724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.10:5463966 chr10:005463966 0 W/5463966-5463966 FN3399-S SNP T -> C AC=1;AN=184;BQB=0.904985;DP=2304;DP4=1148,1095,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00022215;MQSB=0.991476;RPB=0.946592;SGB=30.6558;VDB=0.269436;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T225A|394|LOC_Os10g10040|protein_coding|CODING|LOC_Os10g10040.1|3|1) FN467-S.SNP.10:5468153 chr10:005468153 0 W/5468153-5468153 FN467-S Single Base Substitution G-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN4031-S.SNP.10:5470410 chr10:005470410 0 W/5470410-5470410 FN4031-S SNP A -> C AC=1;AN=168;BQB=0.490873;DP=2876;DP4=1503,1096,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.25569e-09;MQSB=0.964387;RPB=0.0114282;SGB=-41.7816;VDB=0.108583;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.10:5470864 chr10:005470864 0 W/5470864-5470864 FN708-S Single Base Substitution T-C INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN964-S.SNP.10:5484231 chr10:005484231 0 W/5484231-5484231 FN964-S Single Base Substitution G-A INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-120.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN-120 Single Base Substitution T-A INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN-295.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN-295 Single Base Substitution T-A INTERGENIC HOMO SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1623-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN1623-S Single Base Substitution T-A INTERGENIC Homo SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1697-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN1697-S SNP T -> A AC=2;AN=188;BQB=0.663898;DP=1217;DP4=349,797,8,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.42274e-09;MQSB=0.983728;RPB=0.377681;SGB=45.3808;VDB=0.760787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN2113-S SNP T -> A AC=2;AN=168;BQB=0.27648;DP=1591;DP4=505,1000,4,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.45514e-05;MQSB=0.999923;RPB=0.754366;SGB=-37.2282;VDB=0.870034;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN2274-S SNP T -> A AC=2;AN=190;BQB=0.98672;DP=3774;DP4=1445,1497,23,31;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.15196e-23;MQSB=0.224073;RPB=0.699918;SGB=14.546;VDB=0.0311761;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN2707-S SNP T -> A AC=1;AN=200;BQB=0.463046;DP=4829;DP4=2239,1958,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207082;MQB=0.00347827;MQSB=0.85668;RPB=0.818543;SGB=13.8539;VDB=0.00917874;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN3566-S SNP T -> A AC=2;AN=188;BQB=0.847284;DP=3851;DP4=2294,1274,32,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.02043e-22;MQSB=0.995103;RPB=0.532887;SGB=138.74;VDB=0.43941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN3731-S SNP T -> A AC=1;AN=190;BQB=0.818811;DP=2590;DP4=1306,1062,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.869e-06;MQSB=0.972183;RPB=0.984337;SGB=25.439;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3906-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN3906-S SNP T -> A AC=2;AN=158;BQB=0.740689;DP=2490;DP4=1345,924,11,4;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.27294e-09;MQSB=0.973785;RPB=0.880388;SGB=40.8124;VDB=0.753481;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN456-S Single Base Substitution T-A INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN947-S.SNP.10:5486005 chr10:005486005 0 W/5486005-5486005 FN947-S Single Base Substitution T-A INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN4204-S.SNP.10:5490603 chr10:005490603 0 W/5490603-5490603 FN4204-S SNP T -> C AC=2;AN=168;BQB=0.515074;DP=2602;DP4=1076,1441,9,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.93445e-14;MQSB=0.413969;RPB=0.909896;SGB=56.5237;VDB=0.86355;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.10:5491153 chr10:005491153 0 W/5491153-5491153 FN-402 Single Base Substitution C-T INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2650-S.SNP.10:5491435 chr10:005491435 0 W/5491435-5491435 FN2650-S SNP C -> G AC=1;AN=200;BQB=0.601733;DP=4916;DP4=2550,2134,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30124e-08;MQSB=0.540049;RPB=0.475151;SGB=86.5007;VDB=0.470239;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.10:5496528 chr10:005496528 0 W/5496528-5496528 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3725-S.SNP.10:5498237 chr10:005498237 0 W/5498237-5498237 FN3725-S SNP T -> C AC=1;AN=190;BQB=0.863917;DP=2906;DP4=1418,1370,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.72114e-05;MQSB=0.969426;RPB=0.486239;SGB=53.6492;VDB=0.747744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.10:5498518 chr10:005498518 0 W/5498518-5498518 FN2408 SNP G -> A AC=1;AN=200;BQB=0.997064;DP=5022;DP4=2531,2252,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00199124;MQB=3.64742e-14;MQSB=0.498412;RPB=0.993201;SGB=90.7419;VDB=0.588518;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.10:5500939 chr10:005500939 0 W/5500939-5500939 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN1545-S.SNP.10:5506884 chr10:005506884 0 W/5506884-5506884 FN1545-S Single Base Substitution T-C INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN224-S.SNP.10:5513896 chr10:005513896 0 W/5513896-5513896 FN224-S Single Base Substitution C-T INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN-87.SNP.10:5515955 chr10:005515955 0 W/5515955-5515955 FN-87 Single Base Substitution G-A INTRON HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN522-S.SNP.10:5530477 chr10:005530477 0 W/5530477-5530477 FN522-S Single Base Substitution C-T INTERGENIC HOMO SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN1625-S.SNP.10:5543226 chr10:005543226 0 W/5543226-5543226 FN1625-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.10:5543226 chr10:005543226 0 W/5543226-5543226 FN1626-S SNP A -> C AC=1;AN=188;BQB=0.0584173;DP=3644;DP4=1829,1772,13,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03481e-09;MQSB=0.997585;RPB=0.997071;SGB=-73.5561;VDB=0.879194;EFF=UTR_5_PRIME(MODIFIER||1802||499|LOC_Os10g10130|protein_coding|CODING|LOC_Os10g10130.5|1|1),INTRON(MODIFIER||||1015|LOC_Os10g10130|protein_coding|CODING|LOC_Os10g10130.1|1|1),INTRON(MODIFIER||||993|LOC_Os10g10130|protein_coding|CODING|LOC_Os10g10130.2|1|1),INTRON(MODIFIER||||949|LOC_Os10g10130|protein_coding|CODING|LOC_Os10g10130.3|2|1) FN868-S.SNP.10:5546122 chr10:005546122 0 W/5546122-5546122 FN868-S Single Base Substitution C-A INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1079-S.SNP.10:5563328 chr10:005563328 0 W/5563328-5563328 FN1079-S Single Base Substitution C-A INTRON HOMO SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3366-S.SNP.10:5563767 chr10:005563767 0 W/5563767-5563767 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.995454;DP=2813;DP4=1323,1354,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.9918e-10;MQSB=0.760161;RPB=0.707239;SGB=5.28054;VDB=0.908907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K155R|167|LOC_Os10g10140|protein_coding|CODING|LOC_Os10g10140.1|4|1) FN2108-S.SNP.10:5582069 chr10:005582069 0 W/5582069-5582069 FN2108-S SNP C -> T AC=1;AN=168;BQB=0.136502;DP=4122;DP4=2052,2033,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.99592e-08;MQSB=0.998126;RPB=0.812017;SGB=-13.6493;VDB=0.578602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G644D|930|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.1|12|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G449D|735|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.2|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G449D|614|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.4|11|1),UTR_5_PRIME(MODIFIER||272||137|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.6|2|1) FN1725-S.SNP.10:5582311 chr10:005582311 0 W/5582311-5582311 FN1725-S SNP C -> T AC=1;AN=188;BQB=0.683325;DP=3895;DP4=1842,2019,6,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.30362e-09;MQSB=0.982012;RPB=0.983319;SGB=-37.8212;VDB=0.519244;EFF=INTRON(MODIFIER||||930|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.1|10|1),INTRON(MODIFIER||||735|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.2|9|1),INTRON(MODIFIER||||614|LOC_Os10g10170|protein_coding|CODING|LOC_Os10g10170.4|9|1) FN3991-S.SNP.10:5586424 chr10:005586424 0 W/5586424-5586424 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.588634;DP=2358;DP4=873,1391,1,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000884696;MQSB=0.354583;RPB=0.9863;SGB=27.8864;VDB=0.261569;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L44|127|LOC_Os10g10175|protein_coding|CODING|LOC_Os10g10175.1|1|1) FN533-S.SNP.10:5596398 chr10:005596398 0 W/5596398-5596398 FN533-S Single Base Substitution G-C INTRON HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2233-S.SNP.10:5607841 chr10:005607841 0 W/5607841-5607841 FN2233-S SNP T -> A AC=1;AN=190;BQB=0.889358;DP=5017;DP4=2405,2373,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000199322;MQB=1.83182e-05;MQSB=0.941395;RPB=0.593779;SGB=18.3316;VDB=0.96866;EFF=INTRON(MODIFIER||||609|LOC_Os10g10190|protein_coding|CODING|LOC_Os10g10190.1|5|1) FN1602-S.SNP.10:5617307 chr10:005617307 0 W/5617307-5617307 FN1602-S Single Base Substitution A-G INTRON Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN-247.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN-247 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-312.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN-312 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1297-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN1297-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1566-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN1566-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN2449.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN2449 SNP C -> T AC=1;AN=200;BQB=0.557543;DP=4065;DP4=1812,1956,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11994e-05;MQSB=0.724483;RPB=0.163445;SGB=16.4591;VDB=0.806125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E834K|1081|LOC_Os10g10214|protein_coding|CODING|LOC_Os10g10214.1|5|1) FN3955-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN3955-S SNP C -> T AC=2;AN=168;BQB=0.98271;DP=2644;DP4=1204,1341,8,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.6774e-11;MQSB=0.976016;RPB=0.017795;SGB=62.1945;VDB=0.368804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E834K|1081|LOC_Os10g10214|protein_coding|CODING|LOC_Os10g10214.1|5|1) FN477-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN477-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN780-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN780-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN853-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.10:5619500 chr10:005619500 0 W/5619500-5619500 FN908-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN-27.SNP.10:5621424 chr10:005621424 0 W/5621424-5621424 FN-27 Single Base Substitution C-T INTRON Homo SNo: 27, Mutant_ID: FN-27, Generation: M2, Mutations: 30, Genes: 57, Seed availability: Yes. FN3353-S.SNP.10:5622378 chr10:005622378 0 W/5622378-5622378 FN3353-S SNP C -> A AC=2;AN=184;BQB=0.987515;DP=3495;DP4=1666,1685,23,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.30875e-24;MQSB=0.732745;RPB=0.745034;SGB=179.874;VDB=0.159369;EFF=SPLICE_SITE_REGION(LOW||||1081|LOC_Os10g10214|protein_coding|CODING|LOC_Os10g10214.1|1|1),INTRON(MODIFIER||||1081|LOC_Os10g10214|protein_coding|CODING|LOC_Os10g10214.1|1|1) FN1318-S.SNP.10:5622857 chr10:005622857 0 W/5622857-5622857 FN1318-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g10214 retrotransposon protein, putative, unclassified, expressed SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN2274-S.SNP.10:5627772 chr10:005627772 0 W/5627772-5627772 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.999943;DP=4814;DP4=2332,2173,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06505e-14;MQSB=0.733802;RPB=0.8267;SGB=46.6446;VDB=0.16388;EFF=INTRON(MODIFIER||||77|LOC_Os10g10230|protein_coding|CODING|LOC_Os10g10230.1|1|1) FN1682-S.SNP.10:5660099 chr10:005660099 0 W/5660099-5660099 FN1682-S SNP T -> C AC=1;AN=188;BQB=0.408399;DP=2975;DP4=1605,1328,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.06316e-09;MQSB=0.643867;RPB=0.678829;SGB=13.2547;VDB=0.287297;EFF=INTRON(MODIFIER||||1305|LOC_Os10g10300|protein_coding|CODING|LOC_Os10g10300.1|3|1) FN4325-S.SNP.10:5665308 chr10:005665308 0 W/5665308-5665308 FN4325-S SNP A -> T AC=1;AN=170;BQB=0.609812;DP=1773;DP4=771,922,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96296e-05;MQSB=0.96008;RPB=0.237397;SGB=17.6652;VDB=0.283405;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.10:5668922 chr10:005668922 0 W/5668922-5668922 FN4160-S SNP T -> G AC=2;AN=170;BQB=0.991425;DP=2561;DP4=1400,1061,26,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.10291e-22;MQSB=0.922772;RPB=0.994436;SGB=76.0649;VDB=0.291843;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.10:5674507 chr10:005674507 0 W/5674507-5674507 FN454-S Single Base Substitution A-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN454-S.SNP.10:5674512 chr10:005674512 0 W/5674512-5674512 FN454-S Single Base Substitution T-G INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3942-S.SNP.10:5697058 chr10:005697058 0 W/5697058-5697058 FN3942-S SNP A -> T AC=2;AN=168;BQB=0.937059;DP=2556;DP4=1204,1285,12,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.92064e-11;MQSB=0.947889;RPB=0.865298;SGB=62.1945;VDB=0.221832;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V27|894|LOC_Os10g10360|protein_coding|CODING|LOC_Os10g10360.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V27|894|LOC_Os10g10360|protein_coding|CODING|LOC_Os10g10360.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V27|894|LOC_Os10g10360|protein_coding|CODING|LOC_Os10g10360.3|2|1),UTR_5_PRIME(MODIFIER||19||861|LOC_Os10g10360|protein_coding|CODING|LOC_Os10g10360.4|2|1) FN2163-S.SNP.10:5701079 chr10:005701079 0 W/5701079-5701079 FN2163-S SNP C -> A AC=2;AN=168;BQB=0.992438;DP=3875;DP4=1866,1943,22,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.14168e-26;MQSB=0.973118;RPB=0.885436;SGB=-53.7345;VDB=0.611088;EFF=INTRON(MODIFIER||||99|LOC_Os10g10370|protein_coding|CODING|LOC_Os10g10370.1|1|1) FN428-S.SNP.10:5705650 chr10:005705650 0 W/5705650-5705650 FN428-S Single Base Substitution A-G INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2311.SNP.10:5707048 chr10:005707048 0 W/5707048-5707048 FN2311 SNP G -> A AC=1;AN=192;BQB=0.951891;DP=5510;DP4=2820,2359,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0375681;MQB=3.54617e-07;MQSB=0.832181;RPB=0.740817;SGB=18.3052;VDB=0.615681;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A438T|1225|LOC_Os10g10380|protein_coding|CODING|LOC_Os10g10380.1|2|1) FN3892-S.SNP.10:5708344 chr10:005708344 0 W/5708344-5708344 FN3892-S SNP A -> C AC=1;AN=158;BQB=0.986174;DP=2662;DP4=1251,1299,5,2;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0522164;MQB=0.0131743;MQSB=0.505262;RPB=0.98729;SGB=25.2211;VDB=0.783783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ctt|I715L|1225|LOC_Os10g10380|protein_coding|CODING|LOC_Os10g10380.1|3|1) FN_N1-213-1.SNP.10:5709640 chr10:005709640 0 W/5709640-5709640 FN_N1-213-1 Single Base Substitution C-T HET LOC_Os10g10380 retrotransposon protein, putative, unclassified, expressed SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2350.SNP.10:5710893 chr10:005710893 0 W/5710893-5710893 FN2350 SNP A -> T AC=1;AN=192;BQB=0.518209;DP=4852;DP4=2115,2221,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=2.41257e-11;MQSB=0.933471;RPB=0.0110274;SGB=-70.2434;VDB=0.0229288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F273Y|324|LOC_Os10g10390|protein_coding|CODING|LOC_Os10g10390.1|1|1) FN836-S.SNP.10:5720627 chr10:005720627 0 W/5720627-5720627 FN836-S Single Base Substitution C-G INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN391-S.SNP.10:5727285 chr10:005727285 0 W/5727285-5727285 FN391-S Single Base Substitution A-G INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1504-S.SNP.10:5737618 chr10:005737618 0 W/5737618-5737618 FN1504-S Single Base Substitution G-A INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1600-S.SNP.10:5759614 chr10:005759614 0 W/5759614-5759614 FN1600-S Single Base Substitution T-A INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN4148-S.SNP.10:5761183 chr10:005761183 0 W/5761183-5761183 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.993382;DP=2598;DP4=1142,1373,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.53461e-08;MQSB=0.881513;RPB=0.794706;SGB=52.3148;VDB=0.680594;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D203G|1369|LOC_Os10g10480|protein_coding|CODING|LOC_Os10g10480.1|2|1) FN924-S.SNP.10:5783411 chr10:005783411 0 W/5783411-5783411 FN924-S Single Base Substitution T-A INTRON HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN3382-S.SNP.10:5791189 chr10:005791189 0 W/5791189-5791189 FN3382-S SNP A -> G AC=2;AN=184;BQB=0.339467;DP=3095;DP4=1560,1428,18,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.53673e-19;MQSB=0.987283;RPB=0.689882;SGB=127.314;VDB=0.766175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.10:5793397 chr10:005793397 0 W/5793397-5793397 FN1745-S SNP T -> C AC=1;AN=188;BQB=0.435626;DP=3614;DP4=2096,1469,17,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.42482e-11;MQSB=0.998642;RPB=0.998593;SGB=-40.1048;VDB=0.331705;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.10:5795956 chr10:005795956 0 W/5795956-5795956 FN-293 Single Base Substitution A-G INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1339-S.SNP.10:5798945 chr10:005798945 0 W/5798945-5798945 FN1339-S Single Base Substitution G-A INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN1339-S.SNP.10:5798946 chr10:005798946 0 W/5798946-5798946 FN1339-S Single Base Substitution G-A INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN-292.SNP.10:5799625 chr10:005799625 0 W/5799625-5799625 FN-292 Single Base Substitution G-A INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN3571-S.SNP.10:5807514 chr10:005807514 0 W/5807514-5807514 FN3571-S SNP C -> T AC=1;AN=188;BQB=0.972882;DP=2740;DP4=1336,1298,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02357e-06;MQSB=0.970214;RPB=0.924916;SGB=25.3545;VDB=0.916943;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.10:5810742 chr10:005810742 0 W/5810742-5810742 FN942-S Single Base Substitution G-T INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2259-S.SNP.10:5813791 chr10:005813791 0 W/5813791-5813791 FN2259-S SNP G -> T AC=1;AN=190;BQB=0.590857;DP=4915;DP4=2247,2322,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48634e-08;MQSB=0.994371;RPB=0.826209;SGB=62.7569;VDB=0.783307;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.10:5823068 chr10:005823068 0 W/5823068-5823068 FN3751-S SNP C -> A AC=1;AN=190;BQB=0.94048;DP=2960;DP4=1443,1379,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21359e-07;MQSB=0.986119;RPB=0.997879;SGB=67.3108;VDB=0.656585;EFF=INTRON(MODIFIER||||548|LOC_Os10g10540|protein_coding|CODING|LOC_Os10g10540.1|4|1) FN-194.SNP.10:5828868 chr10:005828868 0 W/5828868-5828868 FN-194 Single Base Substitution C-T INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1282-S.SNP.10:5828868 chr10:005828868 0 W/5828868-5828868 FN1282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN_1017-1.SNP.10:5828868 chr10:005828868 0 W/5828868-5828868 FN_1017-1 Single Base Substitution C-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3631-S.SNP.10:5835181 chr10:005835181 0 W/5835181-5835181 FN3631-S SNP A -> T AC=2;AN=190;BQB=0.515944;DP=2958;DP4=1427,1370,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00135227;MQB=7.13723e-14;MQSB=0.887898;RPB=0.968584;SGB=25.8654;VDB=0.91529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.10:5840155 chr10:005840155 0 W/5840155-5840155 FN3892-S SNP T -> G AC=1;AN=158;BQB=0.0675301;DP=2559;DP4=1024,1424,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00160687;MQSB=0.990888;RPB=0.841015;SGB=9.60209;VDB=0.570414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.10:5844787 chr10:005844787 0 W/5844787-5844787 FN2454 SNP A -> G AC=1;AN=200;BQB=0.787681;DP=4972;DP4=2337,2385,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.60855e-12;MQSB=0.980159;RPB=0.511997;SGB=45.1159;VDB=0.880894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.10:5848005 chr10:005848005 0 W/5848005-5848005 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.407657;DP=5097;DP4=2579,2170,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.72535e-14;MQSB=0.231708;RPB=0.270147;SGB=72.7161;VDB=0.376199;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.10:5855404 chr10:005855404 0 W/5855404-5855404 FN1176-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g10600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN3309-S.SNP.10:5857231 chr10:005857231 0 W/5857231-5857231 FN3309-S SNP T -> A AC=2;AN=184;BQB=0.8801;DP=3334;DP4=1467,1695,19,18;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0824835;MQB=5.47343e-06;MQSB=0.25672;RPB=0.980569;SGB=37.2381;VDB=0.831732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.10:5861332 chr10:005861332 0 W/5861332-5861332 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN542-S.SNP.10:5865055 chr10:005865055 0 W/5865055-5865055 FN542-S Single Base Substitution C-T INTERGENIC HOMO SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1152-S.SNP.10:5868586 chr10:005868586 0 W/5868586-5868586 FN1152-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2354.SNP.10:5869113 chr10:005869113 0 W/5869113-5869113 FN2354 SNP G -> A AC=1;AN=192;BQB=0.929747;DP=4437;DP4=2389,1759,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.92655e-11;MQSB=0.653444;RPB=0.242974;SGB=10.4835;VDB=0.390249;EFF=INTERGENIC(MODIFIER||||||||||1) FN999-S.SNP.10:5870088 chr10:005870088 0 W/5870088-5870088 FN999-S Single Base Substitution A-G INTERGENIC HET SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN909-S.SNP.10:5874190 chr10:005874190 0 W/5874190-5874190 FN909-S Single Base Substitution G-A INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN778-S.SNP.10:5875812 chr10:005875812 0 W/5875812-5875812 FN778-S Single Base Substitution C-G INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2239-S.SNP.10:5878207 chr10:005878207 0 W/5878207-5878207 FN2239-S SNP T -> A AC=2;AN=190;BQB=0.895997;DP=4697;DP4=2247,1968,12,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44117e-13;MQSB=0.032214;RPB=0.848072;SGB=-42.1241;VDB=0.981693;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I484|879|LOC_Os10g10640|protein_coding|CODING|LOC_Os10g10640.1|3|1) FN1532-S.SNP.10:5880537 chr10:005880537 0 W/5880537-5880537 FN1532-S Single Base Substitution C-T INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3848-S.SNP.10:5886739 chr10:005886739 0 W/5886739-5886739 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.987386;DP=2460;DP4=1263,1114,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=19;MQ0F=0.419919;MQB=0.568646;MQSB=0;RPB=0.529282;SGB=47.5512;VDB=0.794345;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.10:5887050 chr10:005887050 0 W/5887050-5887050 FN320-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2580-S.SNP.10:5897183 chr10:005897183 0 W/5897183-5897183 FN2580-S SNP A -> T AC=2;AN=198;BQB=0.227126;DP=3875;DP4=1662,1785,15,29;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000516129;MQB=1.76904e-18;MQSB=0.869696;RPB=0.661198;SGB=50.8225;VDB=0.227705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1462-S.SNP.10:5898168 chr10:005898168 0 W/5898168-5898168 FN1462-S Single Base Substitution G-T INTERGENIC Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN1538-S.SNP.10:5898301 chr10:005898301 0 W/5898301-5898301 FN1538-S Single Base Substitution C-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN_809-6-1.SNP.10:5898301 chr10:005898301 0 W/5898301-5898301 FN_809-6-1 Single Base Substitution C-A Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN950-S.SNP.10:5898633 chr10:005898633 0 W/5898633-5898633 FN950-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g10680 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN950-S.SNP.10:5902679 chr10:005902679 0 W/5902679-5902679 FN950-S Single Base Substitution A-T INTRON HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-288.SNP.10:5903637 chr10:005903637 0 W/5903637-5903637 FN-288 Single Base Substitution G-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN4138-S.SNP.10:5906641 chr10:005906641 0 W/5906641-5906641 FN4138-S SNP A -> C AC=1;AN=170;BQB=0.825309;DP=2213;DP4=1006,1045,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.9302e-05;MQSB=0.99354;RPB=0.25438;SGB=30.1021;VDB=0.27538;EFF=INTRON(MODIFIER||||270|LOC_Os10g10700|protein_coding|CODING|LOC_Os10g10700.1|1|1) FN776-S.SNP.10:5911151 chr10:005911151 0 W/5911151-5911151 FN776-S Single Base Substitution G-A INTERGENIC HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN2253-S.SNP.10:5913517 chr10:005913517 0 W/5913517-5913517 FN2253-S SNP G -> A AC=2;AN=190;BQB=0.277943;DP=4436;DP4=2242,1920,6,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.66703e-08;MQSB=7.23613e-05;RPB=0.836339;SGB=31.3213;VDB=0.981702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.10:5914971 chr10:005914971 0 W/5914971-5914971 FN1624-S Single Base Substitution G-C INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN898-S.SNP.10:5918763 chr10:005918763 0 W/5918763-5918763 FN898-S Single Base Substitution G-C INTRON HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN715-S.SNP.10:5919151 chr10:005919151 0 W/5919151-5919151 FN715-S Single Base Substitution C-T INTRON HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1668-S.SNP.10:5924411 chr10:005924411 0 W/5924411-5924411 FN1668-S SNP T -> G AC=1;AN=188;BQB=0.687749;DP=3711;DP4=1770,1907,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.16529e-11;MQSB=0.995628;RPB=0.594627;SGB=-73.5561;VDB=0.669788;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.10:5929053 chr10:005929053 0 W/5929053-5929053 FN825-S Single Base Substitution A-T INTERGENIC HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1099-S.SNP.10:5929868 chr10:005929868 0 W/5929868-5929868 FN1099-S Single Base Substitution G-T INTERGENIC HOMO SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN2758-S.SNP.10:5932492 chr10:005932492 0 W/5932492-5932492 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.954474;DP=5065;DP4=2418,2365,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20294e-14;MQSB=0.878238;RPB=0.871581;SGB=100.316;VDB=0.0997415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.10:5932619 chr10:005932619 0 W/5932619-5932619 FN1188-S Single Base Substitution C-T INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3698-S.SNP.10:5941931 chr10:005941931 0 W/5941931-5941931 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.727059;DP=5157;DP4=2366,2548,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00504169;MQB=3.85504e-05;MQSB=4.81712e-27;RPB=0.934145;SGB=10.3266;VDB=0.181015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.10:5946938 chr10:005946938 0 W/5946938-5946938 FN2531-S SNP T -> A AC=1;AN=186;BQB=0.574688;DP=5364;DP4=2038,3034,9,19;HOB=5.78101e-05;ICB=0.000116242;MQ=21;MQ0F=0.280761;MQB=0.00398206;MQSB=0;RPB=0.421906;SGB=57.8907;VDB=0.551462;EFF=INTRON(MODIFIER||||175|LOC_Os10g10750|protein_coding|CODING|LOC_Os10g10750.1|4|1),INTRON(MODIFIER||||124|LOC_Os10g10750|protein_coding|CODING|LOC_Os10g10750.2|4|1) FN1667-S.SNP.10:5947027 chr10:005947027 0 W/5947027-5947027 FN1667-S SNP G -> A AC=1;AN=188;BQB=0.0166624;DP=5266;DP4=2703,2495,25,21;HOB=5.65867e-05;ICB=0.000113775;MQ=18;MQ0F=0.364983;MQB=0.00216073;MQSB=1.50323e-13;RPB=0.00715124;SGB=-352.467;VDB=0.722305;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G171|175|LOC_Os10g10750|protein_coding|CODING|LOC_Os10g10750.1|5|1),UTR_3_PRIME(MODIFIER||365||124|LOC_Os10g10750|protein_coding|CODING|LOC_Os10g10750.2|5|1) FN-23.SNP.10:5949170 chr10:005949170 0 W/5949170-5949170 FN-23 Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os10g10760 expressed protein SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN-69.SNP.10:5949170 chr10:005949170 0 W/5949170-5949170 FN-69 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g10760 expressed protein SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN3950-S.SNP.10:5949170 chr10:005949170 0 W/5949170-5949170 FN3950-S SNP G -> C AC=1;AN=168;BQB=0.966464;DP=2452;DP4=1281,1077,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28009e-11;MQSB=0.302782;RPB=0.322077;SGB=96.481;VDB=0.770146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K39N|128|LOC_Os10g10760|protein_coding|CODING|LOC_Os10g10760.1|1|1) FN3342-S.SNP.10:5954394 chr10:005954394 0 W/5954394-5954394 FN3342-S SNP G -> C AC=1;AN=184;BQB=0.905237;DP=3639;DP4=1856,1704,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.276724;MQB=0.920245;MQSB=0.920746;RPB=0.805208;SGB=9.8459;VDB=0.288373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H101D|999|LOC_Os10g10770|protein_coding|CODING|LOC_Os10g10770.1|2|1) FN622-S.SNP.10:5961439 chr10:005961439 0 W/5961439-5961439 FN622-S Single Base Substitution T-C INTERGENIC HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-119.SNP.10:5974006 chr10:005974006 0 W/5974006-5974006 FN-119 Single Base Substitution G-A INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN_N1-150-1.SNP.10:5974303 chr10:005974303 0 W/5974303-5974303 FN_N1-150-1 Single Base Substitution T-G Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2196-S.SNP.10:5978569 chr10:005978569 0 W/5978569-5978569 FN2196-S SNP T -> A AC=1;AN=190;BQB=0.315692;DP=4813;DP4=2508,2061,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.43609e-09;MQSB=0.30255;RPB=0.819948;SGB=80.9724;VDB=0.416988;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.10:5978672 chr10:005978672 0 W/5978672-5978672 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1716-S.SNP.10:5979367 chr10:005979367 0 W/5979367-5979367 FN1716-S SNP G -> A AC=1;AN=188;BQB=0.826569;DP=1829;DP4=771,1010,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00164024;MQB=1.38993e-05;MQSB=0.000802619;RPB=0.942232;SGB=43.0708;VDB=0.0829803;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q16|1995|LOC_Os10g10810|protein_coding|CODING|LOC_Os10g10810.1|1|1) FN3923-S.SNP.10:5990864 chr10:005990864 0 W/5990864-5990864 FN3923-S SNP C -> T AC=1;AN=158;BQB=0.8047;DP=2448;DP4=1201,1132,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.067402;MQB=0.992071;MQSB=0.00326975;RPB=0.812566;SGB=30.927;VDB=0.536153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.10:5993743 chr10:005993743 0 W/5993743-5993743 FN1202-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN2492.SNP.10:5994187 chr10:005994187 0 W/5994187-5994187 FN2492 SNP G -> T AC=1;AN=200;BQB=0.57104;DP=5749;DP4=2897,2537,17,12;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.098104;MQB=0.550713;MQSB=0.000329921;RPB=0.559138;SGB=127.947;VDB=0.745547;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W1026C|1964|LOC_Os10g10830|protein_coding|CODING|LOC_Os10g10830.1|2|1) FN1548-S.SNP.10:5994912 chr10:005994912 0 W/5994912-5994912 FN1548-S SNP C -> A AC=2;AN=188;BQB=0.793335;DP=2284;DP4=1241,980,20,11;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.00175131;MQB=3.3419e-05;MQSB=4.75295e-22;RPB=0.695581;SGB=64.2256;VDB=0.473953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P1246Q|1964|LOC_Os10g10830|protein_coding|CODING|LOC_Os10g10830.1|3|1) FN3751-S.SNP.10:5996733 chr10:005996733 0 W/5996733-5996733 FN3751-S SNP G -> A AC=1;AN=190;BQB=0.923269;DP=3292;DP4=1631,1545,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00243013;MQB=0.00322227;MQSB=0.989686;RPB=0.993424;SGB=26.3271;VDB=0.408139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1853Q|1964|LOC_Os10g10830|protein_coding|CODING|LOC_Os10g10830.1|3|1) FN3880-S.SNP.10:6005511 chr10:006005511 0 W/6005511-6005511 FN3880-S SNP T -> C AC=1;AN=158;BQB=0.960951;DP=2492;DP4=1258,1158,8,3;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0690209;MQB=0.672018;MQSB=0;RPB=0.36954;SGB=27.3346;VDB=0.0203962;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.10:6013413 chr10:006013413 0 W/6013413-6013413 FN4204-S SNP A -> G AC=1;AN=170;BQB=0.747186;DP=2664;DP4=1329,1257,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.26529e-06;MQSB=0.975354;RPB=0.876125;SGB=52.3148;VDB=0.392028;EFF=INTRON(MODIFIER||||118|LOC_Os10g10860|protein_coding|CODING|LOC_Os10g10860.1|1|1) FN2138-S.SNP.10:6014444 chr10:006014444 0 W/6014444-6014444 FN2138-S SNP A -> G AC=1;AN=168;BQB=0.0676339;DP=3753;DP4=1999,1714,18,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.08031e-11;MQSB=0.923728;RPB=0.975232;SGB=18.4989;VDB=0.629289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.10:6020725 chr10:006020725 0 W/6020725-6020725 FN3306-S SNP G -> A AC=1;AN=184;BQB=0.99656;DP=2875;DP4=1407,1286,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.43094e-11;MQSB=0.980793;RPB=0.672926;SGB=71.3514;VDB=0.762154;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.10:6021887 chr10:006021887 0 W/6021887-6021887 FN2354 SNP T -> A AC=1;AN=192;BQB=0.866684;DP=4389;DP4=1841,2317,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.0112e-07;MQSB=0.420332;RPB=0.812694;SGB=36.2157;VDB=0.730968;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.10:6022698 chr10:006022698 0 W/6022698-6022698 FN4249-S SNP C -> G AC=1;AN=170;BQB=0.881507;DP=2616;DP4=1252,1269,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.62103e-06;MQSB=0.949496;RPB=0.876331;SGB=52.3148;VDB=0.339187;EFF=INTERGENIC(MODIFIER||||||||||1) FN690-S.SNP.10:6024009 chr10:006024009 0 W/6024009-6024009 FN690-S Single Base Substitution C-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1427-S.SNP.10:6025997 chr10:006025997 0 W/6025997-6025997 FN1427-S Single Base Substitution C-G INTRON HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN3493-S.SNP.10:6033445 chr10:006033445 0 W/6033445-6033445 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.992711;DP=3519;DP4=1797,1625,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.21466e-06;MQSB=0.928517;RPB=0.996951;SGB=44.2207;VDB=0.560105;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.10:6044991 chr10:006044991 0 W/6044991-6044991 FN784-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g10920 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN973-S.SNP.10:6048459 chr10:006048459 0 W/6048459-6048459 FN973-S Single Base Substitution T-G INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3861-S.SNP.10:6054046 chr10:006054046 0 W/6054046-6054046 FN3861-S SNP G -> A AC=1;AN=158;BQB=0.956323;DP=2700;DP4=1256,1374,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.67266e-05;MQSB=0.975686;RPB=0.325712;SGB=33.9591;VDB=0.103518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.10:6057882 chr10:006057882 0 W/6057882-6057882 FN3637-S SNP C -> T AC=1;AN=190;BQB=0.856925;DP=2838;DP4=1286,1439,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50056e-08;MQSB=0.94965;RPB=0.641442;SGB=43.2083;VDB=0.104499;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R191H|674|LOC_Os10g10950|protein_coding|CODING|LOC_Os10g10950.1|3|1) FN3991-S.SNP.10:6058274 chr10:006058274 0 W/6058274-6058274 FN3991-S SNP G -> A AC=1;AN=168;BQB=0.838862;DP=2707;DP4=1387,1187,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00480236;MQB=2.41495e-06;MQSB=0.321301;RPB=0.855831;SGB=52.1728;VDB=0.237864;EFF=INTRON(MODIFIER||||674|LOC_Os10g10950|protein_coding|CODING|LOC_Os10g10950.1|2|1) FN3663-S.SNP.10:6062505 chr10:006062505 0 W/6062505-6062505 FN3663-S SNP C -> T AC=1;AN=190;BQB=0.926127;DP=2716;DP4=1425,1179,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.27327e-07;MQSB=0.962074;RPB=0.99418;SGB=28.9929;VDB=0.379887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2691-S.SNP.10:6064123 chr10:006064123 0 W/6064123-6064123 FN2691-S SNP T -> C AC=2;AN=200;BQB=0.662035;DP=4397;DP4=2007,2100,24,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.49748e-31;MQSB=0.891214;RPB=0.463163;SGB=243.077;VDB=0.949735;EFF=INTERGENIC(MODIFIER||||||||||1) FN-381.SNP.10:6064492 chr10:006064492 0 W/6064492-6064492 FN-381 Single Base Substitution C-T INTERGENIC HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3627-S.SNP.10:6064670 chr10:006064670 0 W/6064670-6064670 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.805074;DP=1918;DP4=999,842,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15718e-06;MQSB=0.817878;RPB=0.650391;SGB=39.9877;VDB=0.0850605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.10:6068852 chr10:006068852 0 W/6068852-6068852 FN2555-S SNP C -> T AC=1;AN=198;BQB=0.514693;DP=3495;DP4=1811,1470,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.10645e-06;MQSB=0.736628;RPB=0.991002;SGB=49.5489;VDB=0.398191;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H4|319|LOC_Os10g10980|protein_coding|CODING|LOC_Os10g10980.1|1|1) FN3491-S.SNP.10:6071396 chr10:006071396 0 W/6071396-6071396 FN3491-S SNP C -> A AC=1;AN=188;BQB=0.944033;DP=2940;DP4=1481,1394,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74089e-05;MQSB=0.943852;RPB=0.297916;SGB=35.3493;VDB=0.0171185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.10:6082314 chr10:006082314 0 W/6082314-6082314 FN2275-S SNP A -> T AC=1;AN=190;BQB=0.999133;DP=4967;DP4=1966,2667,25,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57658e-25;MQSB=0.997831;RPB=0.478651;SGB=58.4968;VDB=0.14139;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcA|S369|531|LOC_Os10g10990|protein_coding|CODING|LOC_Os10g10990.2|7|1),SYNONYMOUS_CODING(LOW|SILENT|tcT/tcA|S370|532|LOC_Os10g10990|protein_coding|CODING|LOC_Os10g10990.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|tcT/tcA|S370|529|LOC_Os10g10990|protein_coding|CODING|LOC_Os10g10990.3|7|1) FN1073-S.SNP.10:6083219 chr10:006083219 0 W/6083219-6083219 FN1073-S Single Base Substitution C-G INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN949-S.SNP.10:6088072 chr10:006088072 0 W/6088072-6088072 FN949-S Single Base Substitution T-C INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2768-S.SNP.10:6090494 chr10:006090494 0 W/6090494-6090494 FN2768-S SNP A -> C AC=1;AN=198;BQB=0.434745;DP=4189;DP4=1960,1961,15,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.03698e-07;MQSB=0.888778;RPB=0.924197;SGB=72.5051;VDB=0.71738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3892-S.SNP.10:6092250 chr10:006092250 0 W/6092250-6092250 FN3892-S SNP T -> A AC=1;AN=158;BQB=0.589127;DP=2473;DP4=1227,1136,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.2749e-05;MQSB=0.810897;RPB=0.315526;SGB=47.0672;VDB=0.140079;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.10:6097976 chr10:006097976 0 W/6097976-6097976 FN3564-S SNP C -> A AC=1;AN=188;BQB=0.948115;DP=2858;DP4=1475,1292,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.91698e-08;MQSB=0.991755;RPB=0.441898;SGB=53.5223;VDB=0.610232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.10:6108623 chr10:006108623 0 W/6108623-6108623 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.581113;DP=2733;DP4=1256,1436,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00209336;MQSB=0.980032;RPB=0.567377;SGB=30.8063;VDB=0.0569337;EFF=INTRON(MODIFIER||||320|LOC_Os10g11034|protein_coding|CODING|LOC_Os10g11034.1|4|1) FN577-S.SNP.10:6116101 chr10:006116101 0 W/6116101-6116101 FN577-S Single Base Substitution A-G INTERGENIC HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN3843-S.SNP.10:6116615 chr10:006116615 0 W/6116615-6116615 FN3843-S SNP T -> C AC=1;AN=190;BQB=0.990686;DP=2374;DP4=957,1178,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13018e-07;MQSB=0.965471;RPB=0.926118;SGB=18.552;VDB=0.854264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.10:6116616 chr10:006116616 0 W/6116616-6116616 FN3843-S SNP A -> T AC=1;AN=190;BQB=0.997999;DP=2381;DP4=984,1277,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.08914e-08;MQSB=0.904591;RPB=0.722555;SGB=49.0954;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.10:6116617 chr10:006116617 0 W/6116617-6116617 FN3843-S SNP G -> T AC=1;AN=190;BQB=0.857447;DP=2392;DP4=999,1279,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17764e-08;MQSB=0.943464;RPB=0.993618;SGB=32.5467;VDB=0.877004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.10:6118707 chr10:006118707 0 W/6118707-6118707 FN3800-S SNP A -> G AC=1;AN=190;BQB=0.991118;DP=2909;DP4=1392,1427,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.99629e-16;MQSB=0.97719;RPB=0.142453;SGB=59.414;VDB=0.655061;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.10:6118756 chr10:006118756 0 W/6118756-6118756 FN805-S Single Base Substitution A-G INTERGENIC HOMO SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN3571-S.SNP.10:6120021 chr10:006120021 0 W/6120021-6120021 FN3571-S SNP G -> A AC=1;AN=188;BQB=0.99294;DP=2533;DP4=1200,1291,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.42791e-07;MQSB=0.971927;RPB=0.766415;SGB=35.9843;VDB=0.476568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.10:6125388 chr10:006125388 0 W/6125388-6125388 FN2540-S SNP C -> T AC=2;AN=198;BQB=0.766535;DP=4023;DP4=1889,1804,17,18;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.00223714;MQB=9.2539e-10;MQSB=0.155363;RPB=0.974114;SGB=115.647;VDB=0.265819;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.10:6126676 chr10:006126676 0 W/6126676-6126676 FN591-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g11080 retrotransposon protein, putative, unclassified, expressed SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2301.SNP.10:6129604 chr10:006129604 0 W/6129604-6129604 FN2301 SNP G -> A AC=1;AN=192;BQB=0.256929;DP=4373;DP4=2061,1978,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.64181e-08;MQSB=0.445695;RPB=0.95019;SGB=26.3496;VDB=0.906282;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.10:6129773 chr10:006129773 0 W/6129773-6129773 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.972961;DP=2622;DP4=1261,1274,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.55376e-08;MQSB=0.998084;RPB=0.86997;SGB=20.7533;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.10:6130450 chr10:006130450 0 W/6130450-6130450 FN3814-S SNP A -> G AC=1;AN=190;BQB=0.994804;DP=2682;DP4=1264,1336,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.61907e-05;MQSB=0.979741;RPB=0.97963;SGB=26.3271;VDB=0.984172;EFF=INTERGENIC(MODIFIER||||||||||1) FN405-S.SNP.10:6131363 chr10:006131363 0 W/6131363-6131363 FN405-S Single Base Substitution T-A INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN545-S.SNP.10:6133881 chr10:006133881 0 W/6133881-6133881 FN545-S Single Base Substitution C-T INTERGENIC HET SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN-89.SNP.10:6144718 chr10:006144718 0 W/6144718-6144718 FN-89 Single Base Substitution T-A INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2461.SNP.10:6151435 chr10:006151435 0 W/6151435-6151435 FN2461 SNP G -> A AC=2;AN=200;BQB=0.968993;DP=4144;DP4=1908,1948,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.78782e-23;MQSB=0.884597;RPB=0.788374;SGB=51.2243;VDB=0.866008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2097-S.SNP.10:6154357 chr10:006154357 0 W/6154357-6154357 FN2097-S SNP C -> G AC=1;AN=168;BQB=0.501483;DP=5877;DP4=2894,2936,18,14;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0553003;MQB=0.287005;MQSB=0;RPB=0.755429;SGB=-45.7659;VDB=0.949064;EFF=INTRON(MODIFIER||||193|LOC_Os10g11120|protein_coding|CODING|LOC_Os10g11120.1|1|1) FN1176-S.SNP.10:6154369 chr10:006154369 0 W/6154369-6154369 FN1176-S Single Base Substitution A-T INTRON HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN445-S.SNP.10:6155362 chr10:006155362 0 W/6155362-6155362 FN445-S Single Base Substitution C-G INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3506-S.SNP.10:6159691 chr10:006159691 0 W/6159691-6159691 FN3506-S SNP G -> A AC=2;AN=188;BQB=0.538492;DP=3014;DP4=1152,1748,17,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.32352e-19;MQSB=0.848318;RPB=0.414637;SGB=139.845;VDB=0.549148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.10:6161604 chr10:006161604 0 W/6161604-6161604 FN2729-S SNP A -> G AC=1;AN=200;BQB=0.577748;DP=5174;DP4=2423,2456,17,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63967e-20;MQSB=0.974808;RPB=0.930716;SGB=78.9831;VDB=0.556412;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.10:6164749 chr10:006164749 0 W/6164749-6164749 FN-185 Single Base Substitution G-A INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN3550-S.SNP.10:6171138 chr10:006171138 0 W/6171138-6171138 FN3550-S SNP T -> C AC=1;AN=188;BQB=0.960413;DP=2818;DP4=1368,1320,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29067e-10;MQSB=0.992063;RPB=0.982293;SGB=31.1628;VDB=0.429688;EFF=INTRON(MODIFIER||||609|LOC_Os10g11140|protein_coding|CODING|LOC_Os10g11140.1|10|1),INTRON(MODIFIER||||557|LOC_Os10g11140|protein_coding|CODING|LOC_Os10g11140.2|10|1) FN2275-S.SNP.10:6176012 chr10:006176012 0 W/6176012-6176012 FN2275-S SNP G -> T AC=1;AN=190;BQB=0.91263;DP=5157;DP4=2644,2102,30,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193911;MQB=1.7036e-25;MQSB=0.0269155;RPB=0.435972;SGB=7.82534;VDB=0.122065;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.10:6177416 chr10:006177416 0 W/6177416-6177416 FN-232 Single Base Substitution A-G INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3506-S.SNP.10:6178688 chr10:006178688 0 W/6178688-6178688 FN3506-S SNP T -> C AC=2;AN=188;BQB=0.985033;DP=3544;DP4=1999,1359,17,8;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00705418;MQB=0.00155908;MQSB=7.4422e-14;RPB=0.897183;SGB=108.042;VDB=0.908812;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.10:6180042 chr10:006180042 0 W/6180042-6180042 FN2322 SNP T -> G AC=1;AN=192;BQB=0.000610788;DP=2854;DP4=884,1122,17,38;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.134548;MQB=0.0670286;MQSB=0;RPB=0.449731;SGB=-650.524;VDB=0.488518;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgT/tgG|C378W|479|LOC_Os10g11150|protein_coding|CODING|LOC_Os10g11150.1|1|1) FN3838-S.SNP.10:6183298 chr10:006183298 0 W/6183298-6183298 FN3838-S SNP C -> G AC=1;AN=190;BQB=0.826628;DP=3151;DP4=1397,1639,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.41701;MQB=0.590345;MQSB=1.05414e-08;RPB=0.403633;SGB=71.8647;VDB=0.0177931;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T206S|302|LOC_Os10g11160|protein_coding|CODING|LOC_Os10g11160.1|1|1) FN1709-S.SNP.10:6183740 chr10:006183740 0 W/6183740-6183740 FN1709-S SNP C -> G AC=2;AN=188;BQB=0.996846;DP=2907;DP4=1911,961,14,11;HOB=0.0210502;ICB=0.494738;MQ=24;MQ0F=0.0722394;MQB=0.315849;MQSB=0.841879;RPB=0.996514;SGB=78.5038;VDB=0.0142664;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.10:6183740 chr10:006183740 0 W/6183740-6183740 FN244-S Single Base Substitution C-G INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN-308.SNP.10:6186666 chr10:006186666 0 W/6186666-6186666 FN-308 Single Base Substitution G-A INTERGENIC HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2493.SNP.10:6188506 chr10:006188506 0 W/6188506-6188506 FN2493 SNP G -> A AC=2;AN=200;BQB=0.999193;DP=4138;DP4=2055,1724,18,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.75872e-14;MQSB=0.889426;RPB=0.51421;SGB=94.3471;VDB=0.951847;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G44|132|LOC_Os10g11170|protein_coding|CODING|LOC_Os10g11170.1|1|1) FN2572-S.SNP.10:6190529 chr10:006190529 0 W/6190529-6190529 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.50283;DP=4455;DP4=2346,1858,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.75708e-15;MQSB=0.686548;RPB=0.994071;SGB=83.2905;VDB=0.533052;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.10:6192340 chr10:006192340 0 W/6192340-6192340 FN1221-S Single Base Substitution G-A INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN495-S.SNP.10:6194607 chr10:006194607 0 W/6194607-6194607 FN495-S Single Base Substitution C-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN629-S.SNP.10:6204815 chr10:006204815 0 W/6204815-6204815 FN629-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g11190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN-90.SNP.10:6206814 chr10:006206814 0 W/6206814-6206814 FN-90 Single Base Substitution C-T INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN2618-S.SNP.10:6208794 chr10:006208794 0 W/6208794-6208794 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.312427;DP=4186;DP4=2026,1952,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26778e-17;MQSB=0.960472;RPB=0.999093;SGB=127.666;VDB=0.0179734;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.10:6211157 chr10:006211157 0 W/6211157-6211157 FN1227-S Single Base Substitution A-G INTRON HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN762-S.SNP.10:6238152 chr10:006238152 0 W/6238152-6238152 FN762-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN4160-S.SNP.10:6249599 chr10:006249599 0 W/6249599-6249599 FN4160-S SNP A -> G AC=2;AN=170;BQB=0.898474;DP=2820;DP4=1423,1289,26,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.89354e-23;MQSB=0.952623;RPB=0.46442;SGB=131.272;VDB=6.08579e-05;EFF=INTRON(MODIFIER||||183|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.1|5|1),INTRON(MODIFIER||||177|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.2|5|1),INTRON(MODIFIER||||150|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.3|5|1),INTRON(MODIFIER||||115|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.4|5|1) FN4183-S.SNP.10:6250234 chr10:006250234 0 W/6250234-6250234 FN4183-S SNP A -> G AC=1;AN=170;BQB=0.805284;DP=2821;DP4=1309,1399,11,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.47774e-15;MQSB=0.834975;RPB=0.926766;SGB=101.184;VDB=0.308066;EFF=UTR_3_PRIME(MODIFIER||413||183|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.1|6|1),UTR_3_PRIME(MODIFIER||413||177|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.2|6|1),UTR_3_PRIME(MODIFIER||413||150|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.3|6|1),UTR_3_PRIME(MODIFIER||413||115|LOC_Os10g11260|protein_coding|CODING|LOC_Os10g11260.4|6|1) FN3553-S.SNP.10:6251277 chr10:006251277 0 W/6251277-6251277 FN3553-S SNP A -> G AC=1;AN=188;BQB=0.989431;DP=2671;DP4=1154,1363,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.43281e-08;MQSB=0.990841;RPB=0.974684;SGB=58.0655;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.10:6253673 chr10:006253673 0 W/6253673-6253673 FN1237-S Single Base Substitution C-T INTRON HOMO SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN2593-S.SNP.10:6253737 chr10:006253737 0 W/6253737-6253737 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.845157;DP=4163;DP4=1881,2048,17,18;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=3.67324e-16;MQSB=0.426176;RPB=0.670638;SGB=155.237;VDB=0.576997;EFF=INTRON(MODIFIER||||367|LOC_Os10g11270|protein_coding|CODING|LOC_Os10g11270.1|1|1) FN3910-S.SNP.10:6256361 chr10:006256361 0 W/6256361-6256361 FN3910-S SNP G -> T AC=1;AN=158;BQB=0.959685;DP=2634;DP4=1263,1294,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.52345e-05;MQSB=0.728552;RPB=0.288758;SGB=29.5899;VDB=0.102965;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.10:6258092 chr10:006258092 0 W/6258092-6258092 FN4051-S SNP G -> T AC=1;AN=168;BQB=0.969921;DP=1422;DP4=879,472,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.000703235;MQB=0.000152121;MQSB=1.74603e-06;RPB=0.995067;SGB=47.7421;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN729-S.SNP.10:6268495 chr10:006268495 0 W/6268495-6268495 FN729-S Single Base Substitution A-C INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN3531-S.SNP.10:6270802 chr10:006270802 0 W/6270802-6270802 FN3531-S SNP G -> A AC=1;AN=188;BQB=0.956259;DP=3034;DP4=1481,1477,4,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.10562e-08;MQSB=0.893591;RPB=0.514469;SGB=35.9843;VDB=0.926209;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.10:6272445 chr10:006272445 0 W/6272445-6272445 FN-312 Single Base Substitution T-C INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1673-S.SNP.10:6273699 chr10:006273699 0 W/6273699-6273699 FN1673-S SNP T -> C AC=1;AN=188;BQB=0.0112453;DP=3495;DP4=1590,1856,8,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.73931e-08;MQSB=0.999348;RPB=0.910528;SGB=-175.627;VDB=0.87832;EFF=INTRON(MODIFIER||||700|LOC_Os10g11310|protein_coding|CODING|LOC_Os10g11310.1|4|1),INTRON(MODIFIER||||700|LOC_Os10g11310|protein_coding|CODING|LOC_Os10g11310.2|5|1),INTRON(MODIFIER||||700|LOC_Os10g11310|protein_coding|CODING|LOC_Os10g11310.3|4|1) FN2395.SNP.10:6281308 chr10:006281308 0 W/6281308-6281308 FN2395 SNP T -> C AC=1;AN=200;BQB=0.999608;DP=5229;DP4=2321,2651,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.36773e-16;MQSB=0.785771;RPB=0.269848;SGB=109.527;VDB=0.00833127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.10:6285966 chr10:006285966 0 W/6285966-6285966 FN3659-S SNP G -> T AC=2;AN=190;BQB=0.975484;DP=2881;DP4=1255,1481,14,6;HOB=0.020831;ICB=0.494793;MQ=15;MQ0F=0.383547;MQB=0.0479128;MQSB=0;RPB=0.263547;SGB=85.5263;VDB=0.48759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A306D|595|LOC_Os10g11330|protein_coding|CODING|LOC_Os10g11330.1|1|1) FN406-S.SNP.10:6294588 chr10:006294588 0 W/6294588-6294588 FN406-S Single Base Substitution A-C INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN914-S.SNP.10:6304367 chr10:006304367 0 W/6304367-6304367 FN914-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g11370 LTPL87 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2534-S.SNP.10:6308680 chr10:006308680 0 W/6308680-6308680 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.200557;DP=4271;DP4=2116,1938,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000702412;MQB=0.000313099;MQSB=0.0640092;RPB=0.98017;SGB=13.7736;VDB=0.0819331;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K870|958|LOC_Os10g11384|protein_coding|CODING|LOC_Os10g11384.1|8|1) FN742-S.SNP.10:6309330 chr10:006309330 0 W/6309330-6309330 FN742-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2594-S.SNP.10:6311716 chr10:006311716 0 W/6311716-6311716 FN2594-S SNP T -> C AC=1;AN=198;BQB=0.967168;DP=4160;DP4=1925,1951,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00649038;MQB=0.00110686;MQSB=0.0166343;RPB=0.95961;SGB=67.9293;VDB=0.431665;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E101G|958|LOC_Os10g11384|protein_coding|CODING|LOC_Os10g11384.1|2|1) FN1061-S.SNP.10:6314510 chr10:006314510 0 W/6314510-6314510 FN1061-S Single Base Substitution C-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3980-S.SNP.10:6320427 chr10:006320427 0 W/6320427-6320427 FN3980-S SNP G -> A AC=1;AN=168;BQB=0.73127;DP=3047;DP4=1543,1409,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0761405;MQB=0.938429;MQSB=0;RPB=0.99999;SGB=10.0307;VDB=0.0760147;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P892L|1406|LOC_Os10g11400|protein_coding|CODING|LOC_Os10g11400.1|1|1) FN2093-S.SNP.10:6322841 chr10:006322841 0 W/6322841-6322841 FN2093-S SNP C -> G AC=1;AN=168;BQB=0.954093;DP=3069;DP4=1620,1405,17,6;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.214728;MQB=0.298382;MQSB=0;RPB=0.763468;SGB=-13.2184;VDB=0.25565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K87N|1406|LOC_Os10g11400|protein_coding|CODING|LOC_Os10g11400.1|1|1) FN3795-S.SNP.10:6328835 chr10:006328835 0 W/6328835-6328835 FN3795-S SNP C -> G AC=1;AN=190;BQB=0.97283;DP=4566;DP4=2363,2056,24,12;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0567236;MQB=0.748368;MQSB=1.33774e-29;RPB=0.927193;SGB=117.84;VDB=0.276882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q456E|1499|LOC_Os10g11430|protein_coding|CODING|LOC_Os10g11430.1|1|1) FN-94.SNP.10:6328978 chr10:006328978 0 W/6328978-6328978 FN-94 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2629-S.SNP.10:6331050 chr10:006331050 0 W/6331050-6331050 FN2629-S SNP G -> C AC=1;AN=200;BQB=0.505794;DP=4840;DP4=2443,2112,14,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.038843;MQB=0.120236;MQSB=0.00833297;RPB=0.918996;SGB=118.737;VDB=0.51157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S1194T|1499|LOC_Os10g11430|protein_coding|CODING|LOC_Os10g11430.1|1|1) FN1371-S.SNP.10:6340150 chr10:006340150 0 W/6340150-6340150 FN1371-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g11454 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN3930-S.SNP.10:6340601 chr10:006340601 0 W/6340601-6340601 FN3930-S SNP A -> G AC=1;AN=158;BQB=0.965177;DP=1944;DP4=999,847,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.92385e-06;MQSB=0.280435;RPB=0.708695;SGB=51.4366;VDB=0.71365;EFF=INTRON(MODIFIER||||1745|LOC_Os10g11454|protein_coding|CODING|LOC_Os10g11454.1|9|1) FN-288.SNP.10:6340935 chr10:006340935 0 W/6340935-6340935 FN-288 Single Base Substitution A-T INTRON HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-288.SNP.10:6340936 chr10:006340936 0 W/6340936-6340936 FN-288 Single Base Substitution A-T INTRON HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-288.SNP.10:6340938 chr10:006340938 0 W/6340938-6340938 FN-288 Single Base Substitution C-T INTRON HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-288.SNP.10:6347292 chr10:006347292 0 W/6347292-6347292 FN-288 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1192-S.SNP.10:6351533 chr10:006351533 0 W/6351533-6351533 FN1192-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN2594-S.SNP.10:6351933 chr10:006351933 0 W/6351933-6351933 FN2594-S SNP A -> T AC=1;AN=198;BQB=0.636872;DP=4030;DP4=2032,1829,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00942928;MQB=0.00416938;MQSB=0.0219633;RPB=0.986321;SGB=44.9538;VDB=0.810801;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.10:6353155 chr10:006353155 0 W/6353155-6353155 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.987498;DP=2612;DP4=1186,1335,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71407e-07;MQSB=0.172728;RPB=0.689537;SGB=62.6088;VDB=0.354724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1484-S.SNP.10:6353710 chr10:006353710 0 W/6353710-6353710 FN1484-S Single Base Substitution G-A INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN708-S.SNP.10:6361108 chr10:006361108 0 W/6361108-6361108 FN708-S Single Base Substitution C-A INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1763-S.SNP.10:6363955 chr10:006363955 0 W/6363955-6363955 FN1763-S SNP G -> A AC=1;AN=188;BQB=0.0155437;DP=4255;DP4=2137,2057,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000542119;MQSB=0.98597;RPB=0.603845;SGB=-81.5271;VDB=0.638458;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.10:6365661 chr10:006365661 0 W/6365661-6365661 FN3364-S SNP G -> T AC=1;AN=184;BQB=0.658575;DP=2940;DP4=1742,1093,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000279961;MQSB=0.527003;RPB=0.791375;SGB=30.6558;VDB=0.931306;EFF=INTERGENIC(MODIFIER||||||||||1) FN-382.SNP.10:6371449 chr10:006371449 0 W/6371449-6371449 FN-382 Single Base Substitution G-A INTERGENIC HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN3591-S.SNP.10:6375177 chr10:006375177 0 W/6375177-6375177 FN3591-S SNP T -> A AC=1;AN=188;BQB=0.914059;DP=2802;DP4=1454,1266,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.57811e-11;MQSB=0.992148;RPB=0.716279;SGB=50.1574;VDB=0.932636;EFF=INTRON(MODIFIER||||216|LOC_Os10g11506|protein_coding|CODING|LOC_Os10g11506.1|2|1) FN2204-S.SNP.10:6375277 chr10:006375277 0 W/6375277-6375277 FN2204-S SNP T -> A AC=1;AN=190;BQB=0.290731;DP=5248;DP4=2660,2252,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12422e-14;MQSB=0.97223;RPB=0.954469;SGB=30.527;VDB=0.406803;EFF=INTRON(MODIFIER||||216|LOC_Os10g11506|protein_coding|CODING|LOC_Os10g11506.1|2|1) FN945-S.SNP.10:6375739 chr10:006375739 0 W/6375739-6375739 FN945-S Single Base Substitution A-C INTRON HOMO SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2721-S.SNP.10:6375977 chr10:006375977 0 W/6375977-6375977 FN2721-S SNP G -> A AC=2;AN=200;BQB=0.476974;DP=4576;DP4=2102,2162,15,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00284091;MQB=1.72831e-13;MQSB=0.869761;RPB=0.992712;SGB=104.921;VDB=0.976771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T55I|216|LOC_Os10g11506|protein_coding|CODING|LOC_Os10g11506.1|2|1) FN2360.SNP.10:6382373 chr10:006382373 0 W/6382373-6382373 FN2360 SNP C -> T AC=1;AN=192;BQB=0.802335;DP=4885;DP4=2475,2114,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000204708;MQB=3.60473e-08;MQSB=0.867721;RPB=0.185845;SGB=23.7852;VDB=0.555089;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.10:6385985 chr10:006385985 0 W/6385985-6385985 FN4253-S SNP C -> A AC=1;AN=170;BQB=0.934853;DP=1705;DP4=833,786,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000115668;MQSB=0.884236;RPB=0.616601;SGB=25.6601;VDB=0.804329;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.10:6386270 chr10:006386270 0 W/6386270-6386270 FN988-S Single Base Substitution C-A INTERGENIC HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2337.SNP.10:6395583 chr10:006395583 0 W/6395583-6395583 FN2337 SNP G -> A AC=1;AN=192;BQB=0.344587;DP=4642;DP4=2377,1957,6,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.43414e-07;MQSB=0.942396;RPB=0.212998;SGB=-14.7687;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.10:6398993 chr10:006398993 0 W/6398993-6398993 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.746768;DP=3201;DP4=1450,1625,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00468604;MQB=0.0224127;MQSB=3.36207e-20;RPB=0.792183;SGB=39.9877;VDB=0.353276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.10:6399026 chr10:006399026 0 W/6399026-6399026 FN1446-S Single Base Substitution C-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1679-S.SNP.10:6406642 chr10:006406642 0 W/6406642-6406642 FN1679-S SNP G -> C AC=2;AN=188;BQB=0.972759;DP=3340;DP4=1483,1780,25,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.25871e-22;MQSB=0.991709;RPB=0.824545;SGB=110.005;VDB=0.00961909;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.10:6406642 chr10:006406642 0 W/6406642-6406642 FN2161-S SNP G -> C AC=2;AN=168;BQB=0.685269;DP=3756;DP4=1669,2018,13,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.53161e-15;MQSB=0.999948;RPB=0.524394;SGB=25.6529;VDB=0.377444;EFF=INTERGENIC(MODIFIER||||||||||1) FN894-S.SNP.10:6420068 chr10:006420068 0 W/6420068-6420068 FN894-S Single Base Substitution C-T INTERGENIC HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2246-S.SNP.10:6425045 chr10:006425045 0 W/6425045-6425045 FN2246-S SNP C -> T AC=2;AN=190;BQB=0.999414;DP=4684;DP4=2132,2202,12,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.42966e-16;MQSB=0.998121;RPB=0.99812;SGB=-4.35995;VDB=0.96916;EFF=INTRON(MODIFIER||||617|LOC_Os10g11650|protein_coding|CODING|LOC_Os10g11650.1|3|1) FN4078-S.SNP.10:6426461 chr10:006426461 0 W/6426461-6426461 FN4078-S SNP A -> G AC=1;AN=182;BQB=0.998065;DP=3121;DP4=1429,1617,9,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.74482e-07;MQSB=0.991535;RPB=0.949369;SGB=15.6115;VDB=0.0624259;EFF=INTRON(MODIFIER||||617|LOC_Os10g11650|protein_coding|CODING|LOC_Os10g11650.1|1|1) FN678-S.SNP.10:6427682 chr10:006427682 0 W/6427682-6427682 FN678-S Single Base Substitution G-A INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2678-S.SNP.10:6432685 chr10:006432685 0 W/6432685-6432685 FN2678-S SNP G -> A AC=2;AN=200;BQB=0.999276;DP=4930;DP4=2377,2276,19,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00020284;MQB=1.42203e-18;MQSB=0.398937;RPB=0.71318;SGB=84.1935;VDB=0.539283;EFF=INTRON(MODIFIER||||768|LOC_Os10g11660|protein_coding|CODING|LOC_Os10g11660.1|1|1) FN3727-S.SNP.10:6433961 chr10:006433961 0 W/6433961-6433961 FN3727-S SNP G -> C AC=2;AN=190;BQB=0.915274;DP=2266;DP4=823,1333,7,11;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00264784;MQB=0.0325932;MQSB=0.00221374;RPB=0.824242;SGB=76.4186;VDB=0.798852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3669-S.SNP.10:6436536 chr10:006436536 0 W/6436536-6436536 FN3669-S SNP C -> A AC=1;AN=190;BQB=0.999872;DP=2253;DP4=956,1222,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.452286;MQB=0.0492018;MQSB=5.91355e-06;RPB=0.987587;SGB=44.5415;VDB=0.610077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3669-S.SNP.10:6436537 chr10:006436537 0 W/6436537-6436537 FN3669-S SNP C -> T AC=1;AN=190;BQB=0.998292;DP=2267;DP4=960,1217,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.449052;MQB=0.0159791;MQSB=1.38939e-05;RPB=0.984731;SGB=39.9877;VDB=0.646725;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.10:6443892 chr10:006443892 0 W/6443892-6443892 FN788-S Single Base Substitution A-T STOP_GAINED HET LOC_Os10g11672 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1465-S.SNP.10:6444401 chr10:006444401 0 W/6444401-6444401 FN1465-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN3862-S.SNP.10:6447978 chr10:006447978 0 W/6447978-6447978 FN3862-S SNP T -> G AC=1;AN=158;BQB=0.532352;DP=2447;DP4=1138,1231,9,1;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000100142;MQSB=0.0215324;RPB=0.768118;SGB=23.9652;VDB=0.0830571;EFF=INTERGENIC(MODIFIER||||||||||1) 701-5.SNP.10:6454462 chr10:006454462 0 W/6454462-6454462 701-5 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os10g11680 retrotransposon protein, putative, unclassified, expressed SNo: 1439, Mutant_ID: 701-5, Generation: M2, Mutations: 18, Genes: 7, Seed availability: Yes. FN893-S.SNP.10:6457271 chr10:006457271 0 W/6457271-6457271 FN893-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g11690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN3912-S.SNP.10:6459398 chr10:006459398 0 W/6459398-6459398 FN3912-S SNP A -> T AC=2;AN=158;BQB=0.719679;DP=2033;DP4=1119,819,12,10;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000983768;MQB=3.40415e-09;MQSB=0.701318;RPB=0.411726;SGB=38.0354;VDB=0.879335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D332V|1797|LOC_Os10g11690|protein_coding|CODING|LOC_Os10g11690.1|3|1) FN961-S.SNP.10:6460145 chr10:006460145 0 W/6460145-6460145 FN961-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g11690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1600-S.SNP.10:6463596 chr10:006463596 0 W/6463596-6463596 FN1600-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g11690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN4183-S.SNP.10:6463889 chr10:006463889 0 W/6463889-6463889 FN4183-S SNP G -> T AC=1;AN=170;BQB=0.810208;DP=2604;DP4=847,1565,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=38;MQ0F=0.0633641;MQB=0.960804;MQSB=0.000643329;RPB=0.788651;SGB=34.878;VDB=0.431098;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.10:6465425 chr10:006465425 0 W/6465425-6465425 FN2779-S SNP G -> A AC=1;AN=194;BQB=0.90482;DP=2771;DP4=1391,1140,13,8;HOB=5.31406e-05;ICB=0.000106829;MQ=44;MQ0F=0.0119091;MQB=0.0105819;MQSB=0.46188;RPB=0.24634;SGB=90.9049;VDB=0.504513;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.10:6468134 chr10:006468134 0 W/6468134-6468134 FN2753-S SNP T -> A AC=1;AN=200;BQB=0.31411;DP=4976;DP4=2528,2248,16,14;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0401929;MQB=1.1873e-05;MQSB=1.36754e-11;RPB=0.88926;SGB=28.752;VDB=0.936741;EFF=INTRON(MODIFIER||||261|LOC_Os10g11696|protein_coding|CODING|LOC_Os10g11696.1|1|1) FN4304-S.SNP.10:6468368 chr10:006468368 0 W/6468368-6468368 FN4304-S SNP T -> G AC=2;AN=170;BQB=0.99303;DP=2477;DP4=1233,1153,10,8;HOB=0.0232526;ICB=0.494188;MQ=32;MQ0F=0.146145;MQB=0.929725;MQSB=3.0571e-31;RPB=0.721405;SGB=74.528;VDB=0.767352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Gtc|F64V|261|LOC_Os10g11696|protein_coding|CODING|LOC_Os10g11696.1|2|1) FN3720-S.SNP.10:6468475 chr10:006468475 0 W/6468475-6468475 FN3720-S SNP T -> C AC=1;AN=190;BQB=0.963011;DP=2777;DP4=1356,1345,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0140439;MQB=0.0120978;MQSB=0.172056;RPB=0.883397;SGB=18.3316;VDB=0.900208;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y99|261|LOC_Os10g11696|protein_coding|CODING|LOC_Os10g11696.1|2|1) FN-375.SNP.10:6469053 chr10:006469053 0 W/6469053-6469053 FN-375 Single Base Substitution T-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN1492-S.SNP.10:6469315 chr10:006469315 0 W/6469315-6469315 FN1492-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os10g11702 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2314.SNP.10:6470604 chr10:006470604 0 W/6470604-6470604 FN2314 SNP G -> T AC=1;AN=192;BQB=0.752773;DP=6486;DP4=3776,2339,3,18;HOB=5.42535e-05;ICB=0.000109072;MQ=13;MQ0F=0.604533;MQB=9.35576e-05;MQSB=0;RPB=0.436547;SGB=13.6122;VDB=0.585522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R459I|1475|LOC_Os10g11702|protein_coding|CODING|LOC_Os10g11702.1|1|1) FN1120-S.SNP.10:6486105 chr10:006486105 0 W/6486105-6486105 FN1120-S Single Base Substitution A-G INTRON HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2196-S.SNP.10:6486970 chr10:006486970 0 W/6486970-6486970 FN2196-S SNP C -> A AC=1;AN=190;BQB=0.435805;DP=4907;DP4=2534,2070,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203791;MQB=4.75206e-11;MQSB=0.931978;RPB=0.238965;SGB=41.5368;VDB=0.370007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.10:6488320 chr10:006488320 0 W/6488320-6488320 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.997432;DP=4749;DP4=2137,2394,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210571;MQB=1.24978e-06;MQSB=0.537592;RPB=0.405801;SGB=29.4541;VDB=0.863752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.10:6490296 chr10:006490296 0 W/6490296-6490296 FN2329 SNP G -> A AC=1;AN=192;BQB=0.595446;DP=5248;DP4=2006,2907,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.96982e-14;MQSB=0.513445;RPB=0.867105;SGB=78.9878;VDB=0.369709;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.10:6502013 chr10:006502013 0 W/6502013-6502013 FN440-S Single Base Substitution G-C INTRON HOMO SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN3433-S.SNP.10:6508698 chr10:006508698 0 W/6508698-6508698 FN3433-S SNP G -> A AC=1;AN=184;BQB=0.99834;DP=3022;DP4=1605,1280,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.53517e-08;MQSB=0.706752;RPB=0.257203;SGB=18.2315;VDB=0.328744;EFF=INTRON(MODIFIER||||184|LOC_Os10g11750|protein_coding|CODING|LOC_Os10g11750.1|2|1) FN2431.SNP.10:6514478 chr10:006514478 0 W/6514478-6514478 FN2431 SNP C -> A AC=2;AN=200;BQB=0.23046;DP=4347;DP4=1928,2133,10,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000230044;MQB=2.23062e-11;MQSB=0.995687;RPB=0.36862;SGB=-36.5;VDB=0.0365592;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.10:6522790 chr10:006522790 0 W/6522790-6522790 FN3832-S SNP C -> G AC=2;AN=190;BQB=0.997036;DP=3106;DP4=1658,1347,22,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.00771e-18;MQSB=0.986817;RPB=0.987406;SGB=149.281;VDB=0.793932;EFF=INTRON(MODIFIER||||1315|LOC_Os10g11794|protein_coding|CODING|LOC_Os10g11794.1|2|1) FN1452-S.SNP.10:6523880 chr10:006523880 0 W/6523880-6523880 FN1452-S Single Base Substitution G-A INTRON HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3488-S.SNP.10:6525646 chr10:006525646 0 W/6525646-6525646 FN3488-S SNP C -> A AC=1;AN=184;BQB=0.728054;DP=3690;DP4=1802,1673,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.72431e-06;MQSB=0.965301;RPB=0.846326;SGB=3.75875;VDB=0.634553;EFF=INTRON(MODIFIER||||1315|LOC_Os10g11794|protein_coding|CODING|LOC_Os10g11794.1|5|1) FN914-S.SNP.10:6526349 chr10:006526349 0 W/6526349-6526349 FN914-S Single Base Substitution A-T INTRON HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3578-S.SNP.10:6531355 chr10:006531355 0 W/6531355-6531355 FN3578-S SNP T -> G AC=2;AN=188;BQB=0.955666;DP=3491;DP4=1641,1662,29,13;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=1.91953e-08;MQSB=0;RPB=0.641982;SGB=45.6639;VDB=0.278066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.10:6532447 chr10:006532447 0 W/6532447-6532447 FN2696-S SNP G -> C AC=1;AN=200;BQB=0.778475;DP=4784;DP4=2220,2267,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00041806;MQB=1.47818e-12;MQSB=0.675515;RPB=0.687148;SGB=91.1059;VDB=0.119903;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.10:6540450 chr10:006540450 0 W/6540450-6540450 FN2592-S SNP T -> A AC=1;AN=198;BQB=0.787923;DP=4351;DP4=1907,2210,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.65909e-05;MQSB=0.996623;RPB=0.915474;SGB=29.3637;VDB=0.677213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.10:6545688 chr10:006545688 0 W/6545688-6545688 FN3971-S SNP T -> A AC=1;AN=168;BQB=0.996561;DP=2368;DP4=1203,1012,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.54248e-07;MQSB=0.707042;RPB=0.738152;SGB=27.8864;VDB=0.0737652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.10:6564363 chr10:006564363 0 W/6564363-6564363 FN2620-S SNP C -> T AC=2;AN=198;BQB=0.565924;DP=4077;DP4=2011,1804,36,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.1959e-32;MQSB=0.317003;RPB=0.912795;SGB=73.1542;VDB=0.353975;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.10:6580917 chr10:006580917 0 W/6580917-6580917 FN952-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g11860 MATE efflux family protein, putative, expressed SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3774-S.SNP.10:6590989 chr10:006590989 0 W/6590989-6590989 FN3774-S SNP C -> T AC=1;AN=190;BQB=0.975534;DP=4677;DP4=2463,2044,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.386573;MQB=0.994959;MQSB=0;RPB=0.688723;SGB=99.1879;VDB=0.0511982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.10:6590991 chr10:006590991 0 W/6590991-6590991 FN3774-S SNP C -> A AC=1;AN=190;BQB=0.761078;DP=4710;DP4=2499,2029,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.388535;MQB=0.633756;MQSB=0;RPB=0.675015;SGB=44.0907;VDB=0.0198525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.10:6590992 chr10:006590992 0 W/6590992-6590992 FN3774-S SNP C -> T AC=1;AN=190;BQB=0.835536;DP=4744;DP4=2492,2044,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.386172;MQB=0.998552;MQSB=0;RPB=0.571879;SGB=99.1879;VDB=0.0511982;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.10:6595022 chr10:006595022 0 W/6595022-6595022 FN909-S Single Base Substitution A-G INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN-90.SNP.10:6595876 chr10:006595876 0 W/6595876-6595876 FN-90 Single Base Substitution G-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN-397.SNP.10:6598159 chr10:006598159 0 W/6598159-6598159 FN-397 Single Base Substitution A-T INTRON HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1374-S.SNP.10:6603497 chr10:006603497 0 W/6603497-6603497 FN1374-S Single Base Substitution A-G INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1374-S.SNP.10:6603506 chr10:006603506 0 W/6603506-6603506 FN1374-S Single Base Substitution A-T INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1162-S.SNP.10:6609686 chr10:006609686 0 W/6609686-6609686 FN1162-S Single Base Substitution C-T INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1173-S.SNP.10:6612669 chr10:006612669 0 W/6612669-6612669 FN1173-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g11920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN820-S.SNP.10:6613724 chr10:006613724 0 W/6613724-6613724 FN820-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os10g11920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN4069-S.SNP.10:6619375 chr10:006619375 0 W/6619375-6619375 FN4069-S SNP A -> T AC=2;AN=182;BQB=0.951857;DP=3164;DP4=1613,1381,32,37;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000316056;MQB=6.59068e-39;MQSB=0.778582;RPB=0.566818;SGB=300.239;VDB=0.997144;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tat/Aat|Y39N|588|LOC_Os10g11930|protein_coding|CODING|LOC_Os10g11930.1|1|1) FN3521-S.SNP.10:6623881 chr10:006623881 0 W/6623881-6623881 FN3521-S SNP G -> A AC=1;AN=188;BQB=0.96265;DP=4069;DP4=2190,1609,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=6.42554e-05;MQSB=0.557935;RPB=0.93672;SGB=-0.634963;VDB=0.811629;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.10:6625440 chr10:006625440 0 W/6625440-6625440 FN479-S Single Base Substitution C-T INTRON HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-179.SNP.10:6627430 chr10:006627430 0 W/6627430-6627430 FN-179 Single Base Substitution C-T INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN1113-S.SNP.10:6631492 chr10:006631492 0 W/6631492-6631492 FN1113-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g11954 retrotransposon protein, putative, unclassified, expressed SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN2137-S.SNP.10:6633157 chr10:006633157 0 W/6633157-6633157 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.862604;DP=2948;DP4=1300,1543,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=4.32436e-09;MQSB=0.0783949;RPB=0.303391;SGB=-11.926;VDB=0.643612;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.10:6634132 chr10:006634132 0 W/6634132-6634132 FN1557-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os10g11970 retrotransposon protein, putative, unclassified, expressed SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-104.SNP.10:6638127 chr10:006638127 0 W/6638127-6638127 FN-104 Single Base Substitution G-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1031-S.SNP.10:6649590 chr10:006649590 0 W/6649590-6649590 FN1031-S Single Base Substitution T-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN501-S.SNP.10:6667519 chr10:006667519 0 W/6667519-6667519 FN501-S Single Base Substitution A-G INTRON HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2500.SNP.10:6669388 chr10:006669388 0 W/6669388-6669388 FN2500 SNP G -> A AC=2;AN=200;BQB=0.146518;DP=3967;DP4=1566,2186,7,11;HOB=0.0198;ICB=0.495051;MQ=35;MQ0F=0.0413411;MQB=0.98652;MQSB=1.0743e-12;RPB=0.886863;SGB=77.2904;VDB=0.67978;EFF=INTRON(MODIFIER||||503|LOC_Os10g12010|protein_coding|CODING|LOC_Os10g12010.1|2|1) FN2475.SNP.10:6690868 chr10:006690868 0 W/6690868-6690868 FN2475 SNP G -> A AC=1;AN=200;BQB=0.998093;DP=4998;DP4=2237,2326,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.50008e-06;MQSB=0.939544;RPB=0.847491;SGB=-15.5309;VDB=0.413893;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.10:6697054 chr10:006697054 0 W/6697054-6697054 FN591-S Single Base Substitution A-T INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2200-S.SNP.10:6697325 chr10:006697325 0 W/6697325-6697325 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.969588;DP=5215;DP4=2630,2278,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.60234e-07;MQSB=0.962382;RPB=0.657802;SGB=23.6597;VDB=0.983037;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.10:6702080 chr10:006702080 0 W/6702080-6702080 FN727-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN2725-S.SNP.10:6707478 chr10:006707478 0 W/6707478-6707478 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.673714;DP=4978;DP4=2438,2296,20,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.73907e-20;MQSB=0.979405;RPB=0.559795;SGB=48.014;VDB=0.816047;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.10:6709697 chr10:006709697 0 W/6709697-6709697 W23-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. W23-2-1.SNP.10:6709700 chr10:006709700 0 W/6709700-6709700 W23-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-51.SNP.10:6713956 chr10:006713956 0 W/6713956-6713956 FN-51 Single Base Substitution G-C INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.10:6713956 chr10:006713956 0 W/6713956-6713956 FN-51 Single Base Substitution G-C INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3674-S.SNP.10:6718256 chr10:006718256 0 W/6718256-6718256 FN3674-S SNP G -> T AC=1;AN=190;BQB=0.999484;DP=2888;DP4=1267,1463,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03205e-08;MQSB=0.94698;RPB=0.665686;SGB=58.2031;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN3946-S.SNP.10:6719703 chr10:006719703 0 W/6719703-6719703 FN3946-S SNP A -> C AC=1;AN=168;BQB=0.94485;DP=1946;DP4=942,916,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.70229e-08;MQSB=0.665701;RPB=0.860415;SGB=48.4712;VDB=0.745077;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.10:6720514 chr10:006720514 0 W/6720514-6720514 FN494-S Single Base Substitution T-A INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN2749-S.SNP.10:6727770 chr10:006727770 0 W/6727770-6727770 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.787189;DP=4928;DP4=2364,2256,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.5726e-10;MQSB=0.932396;RPB=0.995135;SGB=43.8747;VDB=0.850592;EFF=INTRON(MODIFIER||||328|LOC_Os10g12110|protein_coding|CODING|LOC_Os10g12110.1|1|1) FN2253-S.SNP.10:6728606 chr10:006728606 0 W/6728606-6728606 FN2253-S SNP G -> C AC=2;AN=190;BQB=0.696887;DP=4894;DP4=1939,2628,6,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.7207e-08;MQSB=0.99848;RPB=0.940838;SGB=-13.7759;VDB=0.140266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.10:6741759 chr10:006741759 0 W/6741759-6741759 FN3701-S SNP C -> G AC=2;AN=190;BQB=0.919322;DP=3090;DP4=1515,1409,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.02262e-13;MQSB=0.997109;RPB=0.992131;SGB=112.85;VDB=0.636851;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.10:6741965 chr10:006741965 0 W/6741965-6741965 FN3845-S SNP C -> A AC=1;AN=190;BQB=0.71961;DP=2642;DP4=1447,1121,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.30954e-08;MQSB=0.987042;RPB=0.940021;SGB=15.9981;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.10:6744846 chr10:006744846 0 W/6744846-6744846 FN-241 Single Base Substitution C-T INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3519-S.SNP.10:6748601 chr10:006748601 0 W/6748601-6748601 FN3519-S SNP T -> A AC=1;AN=188;BQB=0.92679;DP=3337;DP4=1691,1558,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03173e-07;MQSB=0.942066;RPB=0.961789;SGB=53.5223;VDB=0.301225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.10:6749024 chr10:006749024 0 W/6749024-6749024 FN2788-S SNP C -> T AC=1;AN=186;BQB=0.9694;DP=3647;DP4=1497,1947,12,13;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.20372e-15;MQSB=0.775983;RPB=0.653503;SGB=109.285;VDB=0.247165;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.10:6755283 chr10:006755283 0 W/6755283-6755283 FN758-S Single Base Substitution C-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN922-S.SNP.10:6755881 chr10:006755881 0 W/6755881-6755881 FN922-S Single Base Substitution T-A INTERGENIC HOMO SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2375.SNP.10:6757055 chr10:006757055 0 W/6757055-6757055 FN2375 SNP G -> A AC=1;AN=192;BQB=0.637359;DP=4616;DP4=2022,2211,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.63323e-05;MQSB=0.0234003;RPB=0.980254;SGB=21.9585;VDB=0.664517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.10:6759355 chr10:006759355 0 W/6759355-6759355 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.861678;DP=5405;DP4=2550,2557,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.70301e-09;MQSB=0.960983;RPB=0.996078;SGB=43.8747;VDB=0.453417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.10:6759426 chr10:006759426 0 W/6759426-6759426 FN2108-S SNP C -> T AC=2;AN=168;BQB=0.939362;DP=3922;DP4=1945,1914,29,14;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00101989;MQB=1.31281e-11;MQSB=0.995967;RPB=0.695072;SGB=-99.4518;VDB=0.897561;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.10:6760238 chr10:006760238 0 W/6760238-6760238 FN1252-S Single Base Substitution G-C INTRON HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2535-S.SNP.10:6762971 chr10:006762971 0 W/6762971-6762971 FN2535-S SNP C -> G AC=1;AN=188;BQB=0.968008;DP=3525;DP4=1948,1361,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.120567;MQB=0.700585;MQSB=6.56281e-09;RPB=0.52169;SGB=58.7391;VDB=0.0398901;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.10:6767049 chr10:006767049 0 W/6767049-6767049 FN3528-S SNP G -> T AC=1;AN=188;BQB=0.997975;DP=3039;DP4=1526,1449,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.441922;MQB=0.0666796;MQSB=0.387207;RPB=0.602013;SGB=89.8686;VDB=0.434801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R368S|1608|LOC_Os10g12160|protein_coding|CODING|LOC_Os10g12160.1|4|1) FN1424-S.SNP.10:6776389 chr10:006776389 0 W/6776389-6776389 FN1424-S Single Base Substitution T-A INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1135-S.SNP.10:6778900 chr10:006778900 0 W/6778900-6778900 FN1135-S Single Base Substitution A-T INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1456-S.SNP.10:6779463 chr10:006779463 0 W/6779463-6779463 FN1456-S Single Base Substitution C-T INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3864-S.SNP.10:6783516 chr10:006783516 0 W/6783516-6783516 FN3864-S SNP T -> C AC=1;AN=158;BQB=0.999784;DP=2548;DP4=1290,1159,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0117739;MQB=0.997725;MQSB=3.02876e-14;RPB=0.681931;SGB=64.5449;VDB=0.449535;EFF=INTRON(MODIFIER||||1806|LOC_Os10g12174|protein_coding|CODING|LOC_Os10g12174.1|19|1) FN3368-S.SNP.10:6787238 chr10:006787238 0 W/6787238-6787238 FN3368-S SNP A -> T AC=1;AN=184;BQB=0.877841;DP=2783;DP4=1275,1421,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.75871e-08;MQSB=0.2037;RPB=0.750466;SGB=71.3514;VDB=0.719999;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T752|1806|LOC_Os10g12174|protein_coding|CODING|LOC_Os10g12174.1|11|1) FN4130-S.SNP.10:6790231 chr10:006790231 0 W/6790231-6790231 FN4130-S SNP G -> A AC=2;AN=182;BQB=0.824589;DP=3012;DP4=1589,1322,17,17;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0.00498008;MQB=1.11014e-16;MQSB=0.381544;RPB=0.929239;SGB=109.356;VDB=0.321685;EFF=INTRON(MODIFIER||||1806|LOC_Os10g12174|protein_coding|CODING|LOC_Os10g12174.1|6|1) FN2749-S.SNP.10:6790383 chr10:006790383 0 W/6790383-6790383 FN2749-S SNP C -> G AC=1;AN=200;BQB=0.679181;DP=5055;DP4=2424,2345,6,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000593472;MQB=6.79182e-06;MQSB=0.000550358;RPB=0.966824;SGB=47.4799;VDB=0.767095;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R177T|1806|LOC_Os10g12174|protein_coding|CODING|LOC_Os10g12174.1|6|1) FN2310.SNP.10:6791161 chr10:006791161 0 W/6791161-6791161 FN2310 SNP T -> C AC=1;AN=192;BQB=0.99449;DP=4629;DP4=2157,1992,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00453662;MQB=2.32908e-07;MQSB=0.588725;RPB=0.359879;SGB=108.547;VDB=0.765852;EFF=INTRON(MODIFIER||||1806|LOC_Os10g12174|protein_coding|CODING|LOC_Os10g12174.1|3|1) FN-295.SNP.10:6796080 chr10:006796080 0 W/6796080-6796080 FN-295 Single Base Substitution T-G INTRON HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3676-S.SNP.10:6803017 chr10:006803017 0 W/6803017-6803017 FN3676-S SNP T -> C AC=1;AN=190;BQB=0.998064;DP=2919;DP4=1251,1471,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00171292;MQB=2.62259e-06;MQSB=0.891794;RPB=0.705436;SGB=25.439;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.10:6803825 chr10:006803825 0 W/6803825-6803825 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.857515;DP=5021;DP4=2275,2389,16,19;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0555666;MQB=0.292562;MQSB=0.731372;RPB=0.917745;SGB=115.978;VDB=0.806231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R251H|832|LOC_Os10g12220|protein_coding|CODING|LOC_Os10g12220.1|1|1) FN2315.SNP.10:6805367 chr10:006805367 0 W/6805367-6805367 FN2315 SNP C -> T AC=1;AN=192;BQB=0.820473;DP=4799;DP4=2292,2245,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00229214;MQB=1.17186e-10;MQSB=0.0454449;RPB=0.41616;SGB=46.8644;VDB=0.67609;EFF=INTRON(MODIFIER||||832|LOC_Os10g12220|protein_coding|CODING|LOC_Os10g12220.1|5|1) FN3864-S.SNP.10:6805727 chr10:006805727 0 W/6805727-6805727 FN3864-S SNP G -> T AC=1;AN=158;BQB=0.97297;DP=2450;DP4=1196,1202,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000816327;MQB=4.69763e-06;MQSB=0.0642545;RPB=0.0933862;SGB=51.4366;VDB=0.596958;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D732Y|832|LOC_Os10g12220|protein_coding|CODING|LOC_Os10g12220.1|7|1) FN3615-S.SNP.10:6811561 chr10:006811561 0 W/6811561-6811561 FN3615-S SNP C -> A AC=2;AN=190;BQB=0.925693;DP=3523;DP4=1728,1632,15,8;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0885609;MQB=0.970851;MQSB=1.7045e-21;RPB=0.371786;SGB=99.1879;VDB=0.00499016;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E293*|975|LOC_Os10g12232|protein_coding|CODING|LOC_Os10g12232.1|1|1) FN3463-S.SNP.10:6813568 chr10:006813568 0 W/6813568-6813568 FN3463-S SNP C -> T AC=1;AN=184;BQB=0.903184;DP=2649;DP4=1320,1264,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0245376;MQB=0.973981;MQSB=0.246817;RPB=0.99771;SGB=56.8786;VDB=0.655103;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.10:6821631 chr10:006821631 0 W/6821631-6821631 FN1627-S Single Base Substitution C-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN4154-S.SNP.10:6822213 chr10:006822213 0 W/6822213-6822213 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.988384;DP=3168;DP4=1088,1895,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.00662879;MQB=0.0699106;MQSB=0;RPB=0.569143;SGB=14.9986;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.10:6822471 chr10:006822471 0 W/6822471-6822471 FN2183-S SNP C -> A AC=1;AN=190;BQB=0.999317;DP=5089;DP4=2455,2242,40,15;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0510906;MQB=0.201417;MQSB=7.37495e-15;RPB=0.943051;SGB=185.363;VDB=0.232159;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.10:6824485 chr10:006824485 0 W/6824485-6824485 FN561-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g12260 retrotransposon protein, putative, unclassified, expressed SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN4050-S.SNP.10:6828349 chr10:006828349 0 W/6828349-6828349 FN4050-S SNP A -> T AC=2;AN=168;BQB=0.99226;DP=2428;DP4=1488,836,14,11;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.0560132;MQB=0.00524826;MQSB=5.26632e-14;RPB=0.699638;SGB=105.343;VDB=0.246479;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.10:6840727 chr10:006840727 0 W/6840727-6840727 FN857-S Single Base Substitution C-T INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2481.SNP.10:6841159 chr10:006841159 0 W/6841159-6841159 FN2481 SNP C -> A AC=1;AN=200;BQB=0.892187;DP=4030;DP4=2131,1634,3,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000104622;MQSB=0.430346;RPB=0.88921;SGB=26.6347;VDB=0.779529;EFF=INTRON(MODIFIER||||290|LOC_Os10g12290|protein_coding|CODING|LOC_Os10g12290.1|1|1) FN944-S.SNP.10:6843410 chr10:006843410 0 W/6843410-6843410 FN944-S Single Base Substitution C-T INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN3309-S.SNP.10:6848204 chr10:006848204 0 W/6848204-6848204 FN3309-S SNP C -> T AC=2;AN=184;BQB=0.215248;DP=2750;DP4=1372,1248,16,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.40264e-15;MQSB=0.904897;RPB=0.489056;SGB=-42.4471;VDB=0.294844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2447.SNP.10:6853144 chr10:006853144 0 W/6853144-6853144 FN2447 SNP G -> T AC=1;AN=200;BQB=0.217207;DP=5078;DP4=2644,2184,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65901e-09;MQSB=0.0574645;RPB=0.881595;SGB=72.7161;VDB=0.543504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.10:6853236 chr10:006853236 0 W/6853236-6853236 FN3563-S SNP C -> A AC=1;AN=188;BQB=0.470002;DP=2782;DP4=1311,1382,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0140187;MQB=6.89834e-08;MQSB=3.57406e-05;RPB=0.999998;SGB=78.5038;VDB=0.559036;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.10:6857405 chr10:006857405 0 W/6857405-6857405 FN970-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g12320 expressed protein SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN3823-S.SNP.10:6858139 chr10:006858139 0 W/6858139-6858139 FN3823-S SNP G -> A AC=2;AN=190;BQB=0.962696;DP=3467;DP4=1929,1414,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.55803e-14;MQSB=0.658273;RPB=0.700464;SGB=117.403;VDB=0.0462377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.10:6859394 chr10:006859394 0 W/6859394-6859394 FN2788-S SNP C -> A AC=1;AN=198;BQB=0.998385;DP=4316;DP4=2248,1827,17,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000231696;MQB=4.32597e-14;MQSB=0.870428;RPB=0.995594;SGB=-9.07482;VDB=0.731264;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.10:6859713 chr10:006859713 0 W/6859713-6859713 FN-400 Single Base Substitution C-T INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN-163.SNP.10:6862600 chr10:006862600 0 W/6862600-6862600 FN-163 Single Base Substitution C-T INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2207-S.SNP.10:6867844 chr10:006867844 0 W/6867844-6867844 FN2207-S SNP T -> C AC=1;AN=190;BQB=0.958555;DP=5030;DP4=2384,2328,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.89028e-10;MQSB=0.972432;RPB=0.458851;SGB=53.8699;VDB=0.85773;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.10:6871052 chr10:006871052 0 W/6871052-6871052 FN-184 Single Base Substitution C-T INTRON HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2572-S.SNP.10:6871509 chr10:006871509 0 W/6871509-6871509 FN2572-S SNP C -> A AC=1;AN=198;BQB=0.34574;DP=4435;DP4=2244,1932,23,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.78045e-20;MQSB=0.997105;RPB=0.844279;SGB=76.0565;VDB=0.979827;EFF=INTRON(MODIFIER||||564|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.1|3|1),INTRON(MODIFIER||||420|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.2|3|1) FN2572-S.SNP.10:6871509 chr10:006871509 0 W/6871509-6871509 FN2572-S Single Base Substitution C-A INTRON HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3282-S.SNP.10:6875526 chr10:006875526 0 W/6875526-6875526 FN3282-S SNP G -> T AC=1;AN=184;BQB=0.948212;DP=2819;DP4=1414,1303,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69771e-11;MQSB=0.930783;RPB=0.843827;SGB=53.3568;VDB=0.828558;EFF=INTRON(MODIFIER||||564|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.1|3|1),INTRON(MODIFIER||||420|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.2|3|1) FN2204-S.SNP.10:6876631 chr10:006876631 0 W/6876631-6876631 FN2204-S SNP A -> C AC=1;AN=190;BQB=0.998935;DP=5070;DP4=2263,2440,24,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.29086e-18;MQSB=0.675431;RPB=0.449517;SGB=36.7425;VDB=0.196442;EFF=INTRON(MODIFIER||||564|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.1|5|1),INTRON(MODIFIER||||420|LOC_Os10g12354|protein_coding|CODING|LOC_Os10g12354.2|5|1) FN3394-S.SNP.10:6880408 chr10:006880408 0 W/6880408-6880408 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.99935;DP=2985;DP4=926,1955,2,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24197e-07;MQSB=0.743269;RPB=0.98926;SGB=39.2697;VDB=0.474446;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.10:6881052 chr10:006881052 0 W/6881052-6881052 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.730601;DP=2622;DP4=1476,1050,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000164387;MQSB=0.999989;RPB=0.639418;SGB=39.9877;VDB=0.108725;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.10:6884947 chr10:006884947 0 W/6884947-6884947 FN957-S Single Base Substitution T-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN957-S.SNP.10:6884948 chr10:006884948 0 W/6884948-6884948 FN957-S Single Base Substitution T-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN957-S.SNP.10:6884950 chr10:006884950 0 W/6884950-6884950 FN957-S Single Base Substitution G-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1323-S.SNP.10:6885754 chr10:006885754 0 W/6885754-6885754 FN1323-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1431-S.SNP.10:6885781 chr10:006885781 0 W/6885781-6885781 FN1431-S Single Base Substitution A-G INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN-113.SNP.10:6887365 chr10:006887365 0 W/6887365-6887365 FN-113 Single Base Substitution C-T INTERGENIC HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-348.SNP.10:6889447 chr10:006889447 0 W/6889447-6889447 FN-348 Single Base Substitution A-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN3095-S.SNP.10:6894674 chr10:006894674 0 W/6894674-6894674 FN3095-S SNP G -> T AC=1;AN=184;BQB=0.392785;DP=3198;DP4=1529,1566,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.04831e-10;MQSB=0.976208;RPB=0.995686;SGB=70.9657;VDB=0.449023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:6895728 chr10:006895728 0 W/6895728-6895728 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.913467;DP=3930;DP4=1780,2001,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.72577e-08;MQSB=0.719479;RPB=0.978158;SGB=40.149;VDB=0.0891377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:6895729 chr10:006895729 0 W/6895729-6895729 FN2780-S SNP T -> G AC=1;AN=198;BQB=0.926652;DP=3935;DP4=1690,1989,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.65207e-10;MQSB=0.887577;RPB=0.912126;SGB=24.1541;VDB=0.119974;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.10:6898316 chr10:006898316 0 W/6898316-6898316 FN_N1-116-1 Single Base Substitution T-A HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2532-S.SNP.10:6899542 chr10:006899542 0 W/6899542-6899542 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.9892;DP=4168;DP4=2039,1949,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.43261e-07;MQSB=0.899739;RPB=0.765564;SGB=40.149;VDB=0.266504;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:6903567 chr10:006903567 0 W/6903567-6903567 FN2780-S SNP T -> A AC=1;AN=198;BQB=0.723128;DP=4743;DP4=1806,2751,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.08053e-16;MQSB=0.646522;RPB=0.814666;SGB=113.881;VDB=0.495833;EFF=INTRON(MODIFIER||||209|LOC_Os10g12400|protein_coding|CODING|LOC_Os10g12400.1|1|1) W453-3-1.SNP.10:6905598 chr10:006905598 0 W/6905598-6905598 W453-3-1 Single Base Substitution G-T INTRON HOMO SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2232-S.SNP.10:6911758 chr10:006911758 0 W/6911758-6911758 FN2232-S SNP T -> A AC=1;AN=190;BQB=0.858939;DP=4599;DP4=2514,1564,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000217439;MQB=4.07471e-11;MQSB=0.970173;RPB=0.332978;SGB=38.983;VDB=0.697679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.10:6914240 chr10:006914240 0 W/6914240-6914240 FN3964-S SNP G -> T AC=1;AN=168;BQB=0.464449;DP=2614;DP4=1180,1328,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.45102e-10;MQSB=0.996478;RPB=0.780648;SGB=44.0621;VDB=0.29452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.10:6921840 chr10:006921840 0 W/6921840-6921840 FN2334 SNP A -> C AC=1;AN=192;BQB=0.482505;DP=5289;DP4=2256,2716,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00926451;MQB=0.462411;MQSB=1.09202e-05;RPB=0.571026;SGB=36.2157;VDB=0.397552;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.10:6925942 chr10:006925942 0 W/6925942-6925942 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.992846;DP=4666;DP4=2277,2066,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.60305e-07;MQSB=0.386743;RPB=0.999511;SGB=16.5421;VDB=0.987967;EFF=INTERGENIC(MODIFIER||||||||||1) FN750-S.SNP.10:6930656 chr10:006930656 0 W/6930656-6930656 FN750-S Single Base Substitution G-A INTRON HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2735-S.SNP.10:6931317 chr10:006931317 0 W/6931317-6931317 FN2735-S SNP A -> T AC=1;AN=200;BQB=0.98602;DP=5227;DP4=1874,2933,9,14;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0966137;MQB=0.473797;MQSB=0;RPB=0.585228;SGB=17.5158;VDB=0.893182;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.10:6932766 chr10:006932766 0 W/6932766-6932766 FN457-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g12470 retrotransposon protein, putative, unclassified, expressed SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN1461-S.SNP.10:6939872 chr10:006939872 0 W/6939872-6939872 FN1461-S Single Base Substitution G-A INTERGENIC HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2247-S.SNP.10:6945864 chr10:006945864 0 W/6945864-6945864 FN2247-S SNP C -> G AC=1;AN=190;BQB=0.814131;DP=5045;DP4=2216,2400,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.69923e-09;MQSB=0.983572;RPB=0.747596;SGB=8.77274;VDB=0.852016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.10:6949626 chr10:006949626 0 W/6949626-6949626 FN2756-S SNP A -> G AC=1;AN=200;BQB=0.363837;DP=4706;DP4=2174,2400,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.34269e-14;MQSB=0.998183;RPB=0.90718;SGB=47.7211;VDB=0.961213;EFF=INTRON(MODIFIER||||306|LOC_Os10g12500|protein_coding|CODING|LOC_Os10g12500.1|2|1) FN695-S.SNP.10:6955497 chr10:006955497 0 W/6955497-6955497 FN695-S Single Base Substitution A-C INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN3519-S.SNP.10:6958648 chr10:006958648 0 W/6958648-6958648 FN3519-S SNP C -> T AC=1;AN=188;BQB=0.842233;DP=3166;DP4=1422,1675,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.09149e-07;MQSB=0.991893;RPB=0.910568;SGB=58.0655;VDB=0.529691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.10:6964070 chr10:006964070 0 W/6964070-6964070 FN1349-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN-157.SNP.10:6965086 chr10:006965086 0 W/6965086-6965086 FN-157 Single Base Substitution G-C INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-157.SNP.10:6965090 chr10:006965090 0 W/6965090-6965090 FN-157 Single Base Substitution G-A INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN3659-S.SNP.10:6966343 chr10:006966343 0 W/6966343-6966343 FN3659-S SNP G -> A AC=2;AN=190;BQB=0.929559;DP=2527;DP4=1552,834,23,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000395726;MQB=1.18502e-15;MQSB=0.983662;RPB=0.905424;SGB=121.957;VDB=0.325146;EFF=INTERGENIC(MODIFIER||||||||||1) FN789-S.SNP.10:6968748 chr10:006968748 0 W/6968748-6968748 FN789-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g12530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN3326-S.SNP.10:6969033 chr10:006969033 0 W/6969033-6969033 FN3326-S SNP G -> A AC=1;AN=184;BQB=0.731465;DP=2935;DP4=1282,1587,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.20647e-08;MQSB=0.246773;RPB=0.809723;SGB=53.3568;VDB=0.86563;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q527*|1263|LOC_Os10g12530|protein_coding|CODING|LOC_Os10g12530.1|4|1);LOF=(LOC_Os10g12530|LOC_Os10g12530|1|1.00);NMD=(LOC_Os10g12530|LOC_Os10g12530|1|1.00) FN3697-S.SNP.10:6969760 chr10:006969760 0 W/6969760-6969760 FN3697-S SNP C -> A AC=2;AN=190;BQB=0.850113;DP=2886;DP4=1507,1278,17,8;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00485101;MQB=1.55367e-05;MQSB=0.441535;RPB=0.992681;SGB=78.7471;VDB=0.860504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q316H|1263|LOC_Os10g12530|protein_coding|CODING|LOC_Os10g12530.1|3|1) FN947-S.SNP.10:6971262 chr10:006971262 0 W/6971262-6971262 FN947-S Single Base Substitution G-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3452-S.SNP.10:6971882 chr10:006971882 0 W/6971882-6971882 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.885341;DP=2703;DP4=1240,1391,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0358861;MQB=0.712447;MQSB=0.321202;RPB=0.820404;SGB=30.6558;VDB=0.716595;EFF=INTRON(MODIFIER||||1263|LOC_Os10g12530|protein_coding|CODING|LOC_Os10g12530.1|1|1) FN3965-S.SNP.10:6971988 chr10:006971988 0 W/6971988-6971988 FN3965-S SNP G -> A AC=2;AN=168;BQB=0.566651;DP=2823;DP4=1446,1234,27,20;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0053135;MQB=6.13362e-13;MQSB=0.781937;RPB=0.167011;SGB=99.9709;VDB=0.424033;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y38|1263|LOC_Os10g12530|protein_coding|CODING|LOC_Os10g12530.1|1|1) FN588-S.SNP.10:6972568 chr10:006972568 0 W/6972568-6972568 FN588-S Single Base Substitution G-A INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3395-S.SNP.10:6977879 chr10:006977879 0 W/6977879-6977879 FN3395-S SNP A -> T AC=1;AN=184;BQB=0.945057;DP=2558;DP4=1247,1202,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00039093;MQB=4.75148e-06;MQSB=0.137341;RPB=0.444989;SGB=39.2697;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.10:6979873 chr10:006979873 0 W/6979873-6979873 FN3841-S SNP C -> T AC=1;AN=190;BQB=0.91975;DP=2953;DP4=1438,1427,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00474094;MQB=3.61519e-05;MQSB=0.552507;RPB=0.660483;SGB=76.4186;VDB=0.898384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1219Q|1347|LOC_Os10g12548|protein_coding|CODING|LOC_Os10g12548.1|7|1) FN3982-S.SNP.10:6982140 chr10:006982140 0 W/6982140-6982140 FN3982-S SNP T -> A AC=1;AN=168;BQB=0.656735;DP=2725;DP4=1326,1329,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00844037;MQB=0.00456501;MQSB=0.0446736;RPB=0.845419;SGB=34.4498;VDB=0.239056;EFF=INTRON(MODIFIER||||1347|LOC_Os10g12548|protein_coding|CODING|LOC_Os10g12548.1|2|1) FN871-S.SNP.10:6982456 chr10:006982456 0 W/6982456-6982456 FN871-S Single Base Substitution A-G INTRON HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3879-S.SNP.10:6985296 chr10:006985296 0 W/6985296-6985296 FN3879-S SNP A -> C AC=1;AN=158;BQB=0.806103;DP=2457;DP4=1210,1164,14,7;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0634921;MQB=0.64043;MQSB=1.75716e-22;RPB=0.986251;SGB=35.6659;VDB=0.814569;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aGc|I525S|1347|LOC_Os10g12548|protein_coding|CODING|LOC_Os10g12548.1|1|1) FN3722-S.SNP.10:6989435 chr10:006989435 0 W/6989435-6989435 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.885182;DP=3540;DP4=1542,1843,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.155932;MQB=0.30671;MQSB=0;RPB=0.111825;SGB=18.096;VDB=0.686189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3577-S.SNP.10:6990676 chr10:006990676 0 W/6990676-6990676 FN3577-S SNP A -> T AC=2;AN=188;BQB=0.720899;DP=2861;DP4=1389,1383,15,13;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00349528;MQB=5.34033e-05;MQSB=0.0222661;RPB=0.675461;SGB=121.672;VDB=0.992521;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H213Q|376|LOC_Os10g12560|protein_coding|CODING|LOC_Os10g12560.1|1|1) FN545-S.SNP.10:6990992 chr10:006990992 0 W/6990992-6990992 FN545-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g12560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1751-S.SNP.10:6991140 chr10:006991140 0 W/6991140-6991140 FN1751-S SNP T -> C AC=2;AN=188;BQB=0.238244;DP=3245;DP4=1851,1340,17,20;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.000308166;MQB=9.88143e-10;MQSB=0.476286;RPB=0.999984;SGB=-3.59057;VDB=0.918509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M59V|376|LOC_Os10g12560|protein_coding|CODING|LOC_Os10g12560.1|1|1) FN3675-S.SNP.10:6993133 chr10:006993133 0 W/6993133-6993133 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.462091;DP=2890;DP4=1448,1339,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.69561e-05;MQSB=0.974413;RPB=0.591742;SGB=53.6492;VDB=0.672345;EFF=INTERGENIC(MODIFIER||||||||||1) FN4017-S.SNP.10:6995431 chr10:006995431 0 W/6995431-6995431 FN4017-S SNP G -> A AC=2;AN=168;BQB=0.627853;DP=2511;DP4=1271,1148,8,13;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00756671;MQB=1.59633e-07;MQSB=0.000354129;RPB=0.55253;SGB=62.1945;VDB=0.407713;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.10:6996394 chr10:006996394 0 W/6996394-6996394 FN4120-S SNP A -> C AC=1;AN=182;BQB=0.683779;DP=2916;DP4=1326,1510,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00137174;MQB=1.23513e-07;MQSB=0.339735;RPB=0.927847;SGB=71.1765;VDB=0.419317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agC|R148S|1874|LOC_Os10g12570|protein_coding|CODING|LOC_Os10g12570.1|1|1) FN1438-S.SNP.10:6996656 chr10:006996656 0 W/6996656-6996656 FN1438-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g12570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN_N1-119-1.SNP.10:6996803 chr10:006996803 0 W/6996803-6996803 FN_N1-119-1 Single Base Substitution T-A HET LOC_Os10g12570 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN2470.SNP.10:6998721 chr10:006998721 0 W/6998721-6998721 FN2470 SNP C -> T AC=2;AN=200;BQB=0.737059;DP=4162;DP4=1930,1965,19,18;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.0345987;MQB=3.73924e-09;MQSB=0.818835;RPB=0.649935;SGB=164.789;VDB=0.330771;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A866V|1874|LOC_Os10g12570|protein_coding|CODING|LOC_Os10g12570.1|3|1) FN-304.SNP.10:6999689 chr10:006999689 0 W/6999689-6999689 FN-304 Single Base Substitution A-C INTRON HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN3777-S.SNP.10:7004900 chr10:007004900 0 W/7004900-7004900 FN3777-S SNP T -> G AC=1;AN=190;BQB=0.78752;DP=3151;DP4=1115,1933,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0828308;MQB=0.606733;MQSB=0.384723;RPB=0.903817;SGB=28.9929;VDB=0.475586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L1764W|1874|LOC_Os10g12570|protein_coding|CODING|LOC_Os10g12570.1|12|1) FN2579-S.SNP.10:7006276 chr10:007006276 0 W/7006276-7006276 FN2579-S SNP G -> A AC=1;AN=198;BQB=0.999446;DP=1427;DP4=1041,289,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.00350385;MQB=0.0197232;MQSB=0.0910157;RPB=0.669372;SGB=16.3688;VDB=0.0495477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.10:7009997 chr10:007009997 0 W/7009997-7009997 FN2108-S SNP T -> G AC=2;AN=168;BQB=0.078066;DP=3643;DP4=1701,1869,18,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.9612e-11;MQSB=0.96741;RPB=0.877533;SGB=-134.031;VDB=0.246126;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D621A|652|LOC_Os10g12590|protein_coding|CODING|LOC_Os10g12590.1|4|1) FN1162-S.SNP.10:7014804 chr10:007014804 0 W/7014804-7014804 FN1162-S Single Base Substitution G-T INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3880-S.SNP.10:7019784 chr10:007019784 0 W/7019784-7019784 FN3880-S SNP G -> A AC=1;AN=158;BQB=0.942911;DP=1911;DP4=882,952,3,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.94775e-06;MQSB=0.629407;RPB=0.819894;SGB=55.806;VDB=0.595914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G75S|149|LOC_Os10g12610|protein_coding|CODING|LOC_Os10g12610.1|1|1) FN2648-S.SNP.10:7020206 chr10:007020206 0 W/7020206-7020206 FN2648-S SNP G -> A AC=2;AN=200;BQB=0.911857;DP=4320;DP4=1833,2268,18,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.64856e-22;MQSB=0.872199;RPB=0.896498;SGB=89.4038;VDB=0.840271;EFF=INTRON(MODIFIER||||149|LOC_Os10g12610|protein_coding|CODING|LOC_Os10g12610.1|1|1) FN1353-S.SNP.10:7020236 chr10:007020236 0 W/7020236-7020236 FN1353-S Single Base Substitution G-C INTRON HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN1482-S.SNP.10:7021793 chr10:007021793 0 W/7021793-7021793 FN1482-S Single Base Substitution A-T INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN789-S.SNP.10:7024609 chr10:007024609 0 W/7024609-7024609 FN789-S Single Base Substitution A-T INTRON HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN1106-S.SNP.10:7033472 chr10:007033472 0 W/7033472-7033472 FN1106-S Single Base Substitution G-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN3776-S.SNP.10:7041875 chr10:007041875 0 W/7041875-7041875 FN3776-S SNP G -> A AC=2;AN=190;BQB=0.0913274;DP=2763;DP4=1383,1281,13,12;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0101339;MQB=0.000108184;MQSB=0.551764;RPB=0.21264;SGB=108.296;VDB=0.9564;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D933N|1796|LOC_Os10g12630|protein_coding|CODING|LOC_Os10g12630.1|3|1) FN_N1-151-7.SNP.10:7042399 chr10:007042399 0 W/7042399-7042399 FN_N1-151-7 Single Base Substitution C-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2354.SNP.10:7049539 chr10:007049539 0 W/7049539-7049539 FN2354 SNP C -> T AC=1;AN=192;BQB=0.993661;DP=5033;DP4=2134,2506,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0826545;MQB=0.0489711;MQSB=0;RPB=0.978679;SGB=-10.2539;VDB=0.0104018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.10:7054395 chr10:007054395 0 W/7054395-7054395 FN3310-S SNP C -> G AC=1;AN=184;BQB=0.838564;DP=3702;DP4=1887,1683,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0353863;MQB=0.363692;MQSB=0.316047;RPB=0.648017;SGB=46.3132;VDB=0.900864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.10:7058768 chr10:007058768 0 W/7058768-7058768 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.301723;DP=3547;DP4=1859,1530,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.165774;MQB=0.346004;MQSB=0;RPB=0.0979643;SGB=60.4004;VDB=0.259273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.10:7060773 chr10:007060773 0 W/7060773-7060773 FN2477 SNP C -> G AC=1;AN=200;BQB=0.984098;DP=4673;DP4=2055,2242,8,80;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.144875;MQB=3.95203e-28;MQSB=4.69349e-30;RPB=0.728542;SGB=-1964.85;VDB=0.946192;EFF=INTRON(MODIFIER||||1826|LOC_Os10g12670|protein_coding|CODING|LOC_Os10g12670.1|1|1) FN-68.SNP.10:7060998 chr10:007060998 0 W/7060998-7060998 FN-68 Single Base Substitution T-C INTRON HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3547-S.SNP.10:7067241 chr10:007067241 0 W/7067241-7067241 FN3547-S SNP C -> T AC=1;AN=188;BQB=0.738293;DP=3101;DP4=1455,1501,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00225734;MQB=0.0269382;MQSB=0.00029146;RPB=0.198026;SGB=64.3306;VDB=0.00137962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2314.SNP.10:7073123 chr10:007073123 0 W/7073123-7073123 FN2314 SNP C -> A AC=1;AN=192;BQB=0.993216;DP=8095;DP4=3978,3467,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=23;MQ0F=0.199012;MQB=0.0578216;MQSB=0.567953;RPB=0.997344;SGB=57.1218;VDB=0.649158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P60T|1804|LOC_Os10g12690|protein_coding|CODING|LOC_Os10g12690.1|2|1) FN1727-S.SNP.10:7074130 chr10:007074130 0 W/7074130-7074130 FN1727-S SNP C -> T AC=1;AN=188;BQB=0.805696;DP=2471;DP4=1311,1078,16,7;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.256576;MQB=0.0355222;MQSB=0.991449;RPB=0.997702;SGB=16.3413;VDB=0.924149;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P325S|1804|LOC_Os10g12690|protein_coding|CODING|LOC_Os10g12690.1|3|1) FN1602-S.SNP.10:7074441 chr10:007074441 0 W/7074441-7074441 FN1602-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2253-S.SNP.10:7075800 chr10:007075800 0 W/7075800-7075800 FN2253-S SNP C -> T AC=2;AN=190;BQB=0.228371;DP=5981;DP4=2902,2510,13,11;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0543387;MQB=0.644186;MQSB=7.78837e-33;RPB=0.554386;SGB=18.096;VDB=0.243279;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A881|1804|LOC_Os10g12690|protein_coding|CODING|LOC_Os10g12690.1|3|1) FN485-S.SNP.10:7078956 chr10:007078956 0 W/7078956-7078956 FN485-S Single Base Substitution C-T INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3294-S.SNP.10:7091345 chr10:007091345 0 W/7091345-7091345 FN3294-S SNP G -> A AC=1;AN=184;BQB=0.300301;DP=4296;DP4=1958,1714,202,231;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0591248;MQB=0;MQSB=2.829e-10;RPB=3.24935e-14;SGB=-2662.6;VDB=1;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1665Q|1796|LOC_Os10g12710|protein_coding|CODING|LOC_Os10g12710.1|3|1) FN2136-S.SNP.10:7095378 chr10:007095378 0 W/7095378-7095378 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.292844;DP=3118;DP4=1209,1792,10,18;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.219371;MQB=0.950516;MQSB=6.82054e-19;RPB=0.872328;SGB=-238.038;VDB=0.180362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1084-S.SNP.10:7097000 chr10:007097000 0 W/7097000-7097000 FN1084-S Single Base Substitution G-A INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1200-S.SNP.10:7101634 chr10:007101634 0 W/7101634-7101634 FN1200-S Single Base Substitution C-T STOP_GAINED HET LOC_Os10g12730 retrotransposon protein, putative, unclassified, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1673-S.SNP.10:7102613 chr10:007102613 0 W/7102613-7102613 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.0262018;DP=2785;DP4=1336,1394,16,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23387e-05;MQSB=0.999593;RPB=0.962867;SGB=-88.8972;VDB=0.982005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.10:7103540 chr10:007103540 0 W/7103540-7103540 FN1619-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g12740 retrotransposon protein, putative, unclassified, expressed SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3933-S.SNP.10:7105399 chr10:007105399 0 W/7105399-7105399 FN3933-S SNP C -> T AC=1;AN=158;BQB=0.867071;DP=2676;DP4=1341,1259,10,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.50462e-12;MQSB=0.930397;RPB=0.656468;SGB=82.0227;VDB=0.856348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G893S|1475|LOC_Os10g12740|protein_coding|CODING|LOC_Os10g12740.1|2|1) FN1319-S.SNP.10:7107949 chr10:007107949 0 W/7107949-7107949 FN1319-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os10g12740 retrotransposon protein, putative, unclassified, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2749-S.SNP.10:7125298 chr10:007125298 0 W/7125298-7125298 FN2749-S SNP C -> T AC=1;AN=200;BQB=0.629081;DP=4422;DP4=2242,1942,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07791e-08;MQSB=0.998335;RPB=0.947685;SGB=47.4799;VDB=0.221971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V403M|1064|LOC_Os10g12760|protein_coding|CODING|LOC_Os10g12760.1|3|1) FN1735-S.SNP.10:7130967 chr10:007130967 0 W/7130967-7130967 FN1735-S SNP G -> A AC=1;AN=188;BQB=0.970728;DP=3203;DP4=1472,1681,18,18;HOB=5.65867e-05;ICB=0.000113775;MQ=14;MQ0F=0.456447;MQB=0.140873;MQSB=0.129046;RPB=0.87403;SGB=-44.6718;VDB=0.658713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P1500S|1849|LOC_Os10g12770|protein_coding|CODING|LOC_Os10g12770.1|3|1) FN2685-S.SNP.10:7133148 chr10:007133148 0 W/7133148-7133148 FN2685-S SNP G -> A AC=1;AN=200;BQB=0.958958;DP=7812;DP4=3345,4088,14,9;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.307476;MQB=0.0100727;MQSB=0;RPB=0.670318;SGB=100.316;VDB=0.594895;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q773*|1849|LOC_Os10g12770|protein_coding|CODING|LOC_Os10g12770.1|3|1) FN3555-S.SNP.10:7133929 chr10:007133929 0 W/7133929-7133929 FN3555-S SNP G -> A AC=1;AN=188;BQB=0.922045;DP=3720;DP4=1662,1995,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.016129;MQB=0.377162;MQSB=0.498596;RPB=0.878892;SGB=48.979;VDB=0.0607873;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V512|1849|LOC_Os10g12770|protein_coding|CODING|LOC_Os10g12770.1|3|1) FN3730-S.SNP.10:7133946 chr10:007133946 0 W/7133946-7133946 FN3730-S SNP G -> C AC=2;AN=190;BQB=0.873659;DP=2983;DP4=1427,1432,14,23;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0164264;MQB=1.99765e-06;MQSB=0.203392;RPB=0.356158;SGB=79.845;VDB=0.502601;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Gat|H507D|1849|LOC_Os10g12770|protein_coding|CODING|LOC_Os10g12770.1|3|1) FN2219-S.SNP.10:7139156 chr10:007139156 0 W/7139156-7139156 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.966241;DP=4207;DP4=1817,2038,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000214917;MQSB=0.180859;RPB=0.133452;SGB=-0.550503;VDB=0.0697765;EFF=INTERGENIC(MODIFIER||||||||||1) FN992-S.SNP.10:7140224 chr10:007140224 0 W/7140224-7140224 FN992-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN-63.SNP.10:7140668 chr10:007140668 0 W/7140668-7140668 FN-63 Single Base Substitution G-C INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN3805-S.SNP.10:7142889 chr10:007142889 0 W/7142889-7142889 FN3805-S SNP A -> C AC=2;AN=190;BQB=0.253573;DP=3373;DP4=1540,1592,18,15;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000296472;MQB=2.68536e-15;MQSB=0.0710828;RPB=0.81141;SGB=-80.5649;VDB=0.369216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D21E|200|LOC_Os10g12790|protein_coding|CODING|LOC_Os10g12790.1|1|1) FN2593-S.SNP.10:7145294 chr10:007145294 0 W/7145294-7145294 FN2593-S SNP G -> C AC=1;AN=198;BQB=0.961242;DP=4477;DP4=2175,2077,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.232745;MQB=0.065735;MQSB=0;RPB=0.579325;SGB=77.1196;VDB=0.6564;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.10:7147079 chr10:007147079 0 W/7147079-7147079 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.941016;DP=4882;DP4=2471,2029,19,12;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.144818;MQB=0.46491;MQSB=9.98909e-21;RPB=0.345581;SGB=101.557;VDB=0.817726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K331N|416|LOC_Os10g12800|protein_coding|CODING|LOC_Os10g12800.1|2|1) FN1368-S.SNP.10:7157238 chr10:007157238 0 W/7157238-7157238 FN1368-S Single Base Substitution T-C INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN421-S.SNP.10:7176925 chr10:007176925 0 W/7176925-7176925 FN421-S Single Base Substitution G-A INTRON HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2092-S.SNP.10:7186390 chr10:007186390 0 W/7186390-7186390 FN2092-S SNP T -> A AC=1;AN=168;BQB=0.081437;DP=3682;DP4=1236,2367,7,18;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.127376;MQB=0.363465;MQSB=0.000948992;RPB=0.946245;SGB=-100.631;VDB=0.912323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.10:7188383 chr10:007188383 0 W/7188383-7188383 FN1039-S Single Base Substitution C-T INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN3110-S.SNP.10:7189621 chr10:007189621 0 W/7189621-7189621 FN3110-S SNP C -> G AC=1;AN=184;BQB=0.999313;DP=3061;DP4=1640,1329,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00294022;MQB=0.000192688;MQSB=7.80775e-14;RPB=0.938789;SGB=25.7969;VDB=0.773282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.10:7193805 chr10:007193805 0 W/7193805-7193805 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.66989;DP=4705;DP4=2334,2073,10,3;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0456961;MQB=0.00318583;MQSB=9.03992e-13;RPB=0.806615;SGB=54.2646;VDB=0.7156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN1413-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g13350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1529-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN1529-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g13350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2445.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN2445 SNP G -> C AC=1;AN=200;BQB=0.692332;DP=6041;DP4=2211,3506,8,5;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0922033;MQB=0.60523;MQSB=3.39238e-40;RPB=0.847726;SGB=19.0642;VDB=0.151759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P348R|1229|LOC_Os10g13350|protein_coding|CODING|LOC_Os10g13350.1|3|1) FN3359-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN3359-S SNP G -> C AC=1;AN=184;BQB=0.997778;DP=3920;DP4=1701,2108,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.136224;MQB=0.361827;MQSB=9.25959e-11;RPB=0.0553864;SGB=48.7425;VDB=0.373713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P348R|1229|LOC_Os10g13350|protein_coding|CODING|LOC_Os10g13350.1|3|1) FN4049-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN4049-S SNP G -> C AC=1;AN=168;BQB=0.966773;DP=3164;DP4=1251,1774,6,22;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.134956;MQB=0.0491636;MQSB=6.70394e-10;RPB=0.490838;SGB=86.2102;VDB=0.769756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P348R|1229|LOC_Os10g13350|protein_coding|CODING|LOC_Os10g13350.1|3|1) FN550-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN550-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g13350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN673-S.SNP.10:7209217 chr10:007209217 0 W/7209217-7209217 FN673-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g13350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN1473-S.SNP.10:7214163 chr10:007214163 0 W/7214163-7214163 FN1473-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2488.SNP.10:7214784 chr10:007214784 0 W/7214784-7214784 FN2488 SNP C -> G AC=1;AN=200;BQB=0.994943;DP=2819;DP4=1126,1480,9,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00106421;MQB=4.97728e-06;MQSB=0.591806;RPB=0.87269;SGB=47.4799;VDB=0.565662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.10:7222918 chr10:007222918 0 W/7222918-7222918 FN1288-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g13370 retrotransposon protein, putative, unclassified, expressed SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN808-S.SNP.10:7223211 chr10:007223211 0 W/7223211-7223211 FN808-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g13370 retrotransposon protein, putative, unclassified, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3342-S.SNP.10:7231041 chr10:007231041 0 W/7231041-7231041 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.302607;DP=4593;DP4=2553,1928,9,18;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0200305;MQB=0.118994;MQSB=4.75424e-14;RPB=0.00856774;SGB=85.0529;VDB=0.612208;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N329|800|LOC_Os10g13390|protein_coding|CODING|LOC_Os10g13390.1|3|1) FN721-S.SNP.10:7237366 chr10:007237366 0 W/7237366-7237366 FN721-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g13400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3553-S.SNP.10:7247129 chr10:007247129 0 W/7247129-7247129 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.998989;DP=2729;DP4=1322,1352,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.81466e-07;MQSB=0.932647;RPB=0.934268;SGB=39.8925;VDB=0.0735697;EFF=INTRON(MODIFIER||||529|LOC_Os10g13420|protein_coding|CODING|LOC_Os10g13420.1|3|1) FN3553-S.SNP.10:7247130 chr10:007247130 0 W/7247130-7247130 FN3553-S SNP A -> T AC=1;AN=188;BQB=0.917368;DP=2737;DP4=1327,1342,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.17659e-07;MQSB=0.959426;RPB=0.906136;SGB=39.8925;VDB=0.0705986;EFF=INTRON(MODIFIER||||529|LOC_Os10g13420|protein_coding|CODING|LOC_Os10g13420.1|3|1) FN1499-S.SNP.10:7250135 chr10:007250135 0 W/7250135-7250135 FN1499-S Single Base Substitution C-A INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN473-S.SNP.10:7265668 chr10:007265668 0 W/7265668-7265668 FN473-S Single Base Substitution G-A INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN2272-S.SNP.10:7266042 chr10:007266042 0 W/7266042-7266042 FN2272-S SNP G -> A AC=1;AN=190;BQB=0.930762;DP=2239;DP4=294,1812,1,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.07953e-05;MQSB=0.958596;RPB=0.210632;SGB=44.5415;VDB=0.794097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.10:7269030 chr10:007269030 0 W/7269030-7269030 FN2577-S SNP G -> A AC=1;AN=198;BQB=0.996782;DP=4411;DP4=2011,2176,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.24081e-06;MQSB=0.968765;RPB=0.696528;SGB=18.9639;VDB=0.56105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.10:7277012 chr10:007277012 0 W/7277012-7277012 FN3517-S SNP G -> T AC=2;AN=188;BQB=0.998547;DP=2801;DP4=1240,1464,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.88796e-14;MQSB=0.999595;RPB=0.33586;SGB=108.042;VDB=0.613985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.10:7278933 chr10:007278933 0 W/7278933-7278933 FN1476-S Single Base Substitution T-C NON_SYNONYMOUS_CODING Homo LOC_Os10g13470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2139-S.SNP.10:7279848 chr10:007279848 0 W/7279848-7279848 FN2139-S SNP T -> C AC=1;AN=168;BQB=0.370428;DP=3698;DP4=1843,1812,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17527e-07;MQSB=0.974331;RPB=0.981781;SGB=-66.4989;VDB=0.555437;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I568|662|LOC_Os10g13470|protein_coding|CODING|LOC_Os10g13470.1|7|1) FN2302.SNP.10:7281936 chr10:007281936 0 W/7281936-7281936 FN2302 SNP C -> T AC=1;AN=192;BQB=0.126611;DP=4745;DP4=2292,2224,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.23979e-09;MQSB=0.672912;RPB=0.527438;SGB=-35.3278;VDB=0.212649;EFF=SPLICE_SITE_DONOR(HIGH||||795|LOC_Os10g13480|protein_coding|CODING|LOC_Os10g13480.1|3|1),INTRON(MODIFIER||||795|LOC_Os10g13480|protein_coding|CODING|LOC_Os10g13480.1|3|1);LOF=(LOC_Os10g13480|LOC_Os10g13480|1|1.00) FN976-S.SNP.10:7282265 chr10:007282265 0 W/7282265-7282265 FN976-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g13480 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN2122-S.SNP.10:7283514 chr10:007283514 0 W/7283514-7283514 FN2122-S SNP C -> T AC=2;AN=168;BQB=0.0856427;DP=3528;DP4=1721,1736,22,19;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=7.7637e-09;MQSB=0.440751;RPB=0.917574;SGB=-5.46373;VDB=0.997869;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C144Y|795|LOC_Os10g13480|protein_coding|CODING|LOC_Os10g13480.1|2|1) FN-100.SNP.10:7290965 chr10:007290965 0 W/7290965-7290965 FN-100 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g13490 retrotransposon protein, putative, unclassified, expressed SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN-101.SNP.10:7292388 chr10:007292388 0 W/7292388-7292388 FN-101 Single Base Substitution C-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-155.SNP.10:7293014 chr10:007293014 0 W/7293014-7293014 FN-155 Single Base Substitution G-A INTRON HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN4163-S.SNP.10:7295626 chr10:007295626 0 W/7295626-7295626 FN4163-S SNP G -> T AC=2;AN=170;BQB=0.895816;DP=2617;DP4=1158,1375,13,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.1991e-12;MQSB=0.985274;RPB=0.960283;SGB=78.9707;VDB=0.672098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.10:7299059 chr10:007299059 0 W/7299059-7299059 FN1460-S Single Base Substitution C-A INTRON Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. W500-4-7-1.SNP.10:7304085 chr10:007304085 0 W/7304085-7304085 W500-4-7-1 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN3947-S.SNP.10:7305055 chr10:007305055 0 W/7305055-7305055 FN3947-S SNP A -> G AC=1;AN=168;BQB=0.904707;DP=2692;DP4=1363,1138,15,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000371471;MQB=1.45407e-11;MQSB=0.970388;RPB=0.572318;SGB=41.6313;VDB=0.114895;EFF=INTERGENIC(MODIFIER||||||||||1) FN559-S.SNP.10:7307498 chr10:007307498 0 W/7307498-7307498 FN559-S Single Base Substitution G-A INTRON HOMO SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1266-S.SNP.10:7318949 chr10:007318949 0 W/7318949-7318949 FN1266-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2146-S.SNP.10:7318955 chr10:007318955 0 W/7318955-7318955 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.454416;DP=1282;DP4=540,691,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00780031;MQB=0.00419181;MQSB=2.87226e-07;RPB=0.903081;SGB=30.0193;VDB=0.843342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.10:7320499 chr10:007320499 0 W/7320499-7320499 FN3794-S SNP G -> C AC=2;AN=190;BQB=0.947429;DP=2957;DP4=1582,1273,20,14;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0189381;MQB=2.42748e-07;MQSB=0.132575;RPB=0.50065;SGB=149.281;VDB=0.73114;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q1516E|1713|LOC_Os10g13530|protein_coding|CODING|LOC_Os10g13530.1|4|1) FN_955-1.SNP.10:7320499 chr10:007320499 0 W/7320499-7320499 FN_955-1 Single Base Substitution G-C Homo LOC_Os10g13530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3845-S.SNP.10:7325750 chr10:007325750 0 W/7325750-7325750 FN3845-S SNP A -> G AC=1;AN=190;BQB=0.447413;DP=3027;DP4=1500,1386,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0538487;MQB=0.935807;MQSB=0.488913;RPB=0.417612;SGB=38.983;VDB=0.558951;EFF=INTRON(MODIFIER||||1713|LOC_Os10g13530|protein_coding|CODING|LOC_Os10g13530.1|2|1) FN-220.SNP.10:7327035 chr10:007327035 0 W/7327035-7327035 FN-220 Single Base Substitution G-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2785-S.SNP.10:7330545 chr10:007330545 0 W/7330545-7330545 FN2785-S SNP C -> G AC=1;AN=198;BQB=0.099553;DP=4604;DP4=2356,1865,21,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.06565e-14;MQSB=0.987701;RPB=0.947906;SGB=-78.0891;VDB=0.425767;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.10:7335586 chr10:007335586 0 W/7335586-7335586 FN3439-S SNP G -> C AC=1;AN=184;BQB=0.900991;DP=2551;DP4=1180,1283,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.7835e-05;MQSB=0.996336;RPB=0.28628;SGB=21.6609;VDB=0.709501;EFF=INTRON(MODIFIER||||471|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.1|10|1),INTRON(MODIFIER||||303|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.3|6|1) FN2280-S.SNP.10:7335903 chr10:007335903 0 W/7335903-7335903 FN2280-S SNP A -> T AC=2;AN=190;BQB=0.961486;DP=5079;DP4=2452,2283,21,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.33388e-22;MQSB=0.75453;RPB=0.981211;SGB=35.1887;VDB=0.0814972;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C426S|442|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.2|9|1),INTRON(MODIFIER||||471|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.1|10|1),INTRON(MODIFIER||||303|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.3|6|1) FN2280-S.SNP.10:7335904 chr10:007335904 0 W/7335904-7335904 FN2280-S SNP A -> T AC=2;AN=190;BQB=0.391012;DP=5065;DP4=2422,2300,21,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.02916e-22;MQSB=0.804758;RPB=0.884053;SGB=38.2964;VDB=0.176676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F425L|442|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.2|9|1),INTRON(MODIFIER||||471|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.1|10|1),INTRON(MODIFIER||||303|LOC_Os10g13550|protein_coding|CODING|LOC_Os10g13550.3|6|1) FN-163.SNP.10:7337190 chr10:007337190 0 W/7337190-7337190 FN-163 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g13550 endonuclease/exonuclease/phosphatase family domain containing protein, expressed SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2188-S.SNP.10:7340691 chr10:007340691 0 W/7340691-7340691 FN2188-S SNP A -> G AC=2;AN=190;BQB=0.708639;DP=4872;DP4=2114,2256,35,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.24296e-31;MQSB=0.690784;RPB=0.746881;SGB=11.7025;VDB=0.185334;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.10:7341975 chr10:007341975 0 W/7341975-7341975 FN1368-S Single Base Substitution A-C INTRON HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2588-S.SNP.10:7344838 chr10:007344838 0 W/7344838-7344838 FN2588-S SNP C -> T AC=1;AN=198;BQB=0.802504;DP=4415;DP4=2119,1998,14,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15529e-18;MQSB=0.564582;RPB=0.774993;SGB=112.051;VDB=0.192869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.10:7350163 chr10:007350163 0 W/7350163-7350163 FN1381-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g13570 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN_815-4-1.SNP.10:7350190 chr10:007350190 0 W/7350190-7350190 FN_815-4-1 Single Base Substitution C-T HET LOC_Os10g13570 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN-251.SNP.10:7350933 chr10:007350933 0 W/7350933-7350933 FN-251 Single Base Substitution C-T INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2696-S.SNP.10:7352155 chr10:007352155 0 W/7352155-7352155 FN2696-S SNP C -> T AC=1;AN=200;BQB=0.952181;DP=4766;DP4=2179,2334,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.80668e-12;MQSB=0.792689;RPB=0.995945;SGB=39.9056;VDB=0.418503;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.10:7364121 chr10:007364121 0 W/7364121-7364121 FN428-S Single Base Substitution C-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1304-S.SNP.10:7369280 chr10:007369280 0 W/7369280-7369280 FN1304-S Single Base Substitution T-G INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN4030-S.SNP.10:7377682 chr10:007377682 0 W/7377682-7377682 FN4030-S SNP G -> T AC=2;AN=168;BQB=0.586825;DP=2954;DP4=1505,1324,22,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.62816e-17;MQSB=0.897537;RPB=0.344743;SGB=-8.47945;VDB=0.695194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A121S|1735|LOC_Os10g13610|protein_coding|CODING|LOC_Os10g13610.1|1|1) FN1414-S.SNP.10:7379174 chr10:007379174 0 W/7379174-7379174 FN1414-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN1414-S.SNP.10:7379178 chr10:007379178 0 W/7379178-7379178 FN1414-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g13610 retrotransposon protein, putative, unclassified, expressed SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2572-S.SNP.10:7379797 chr10:007379797 0 W/7379797-7379797 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.969433;DP=3925;DP4=1834,1810,19,22;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.74833e-17;MQSB=0.610174;RPB=0.331706;SGB=46.0372;VDB=0.146901;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W756*|1735|LOC_Os10g13610|protein_coding|CODING|LOC_Os10g13610.1|3|1);LOF=(LOC_Os10g13610|LOC_Os10g13610|1|1.00);NMD=(LOC_Os10g13610|LOC_Os10g13610|1|1.00) FN2572-S.SNP.10:7379797 chr10:007379797 0 W/7379797-7379797 FN2572-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g13610 retrotransposon protein, putative, unclassified, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN673-S.SNP.10:7380444 chr10:007380444 0 W/7380444-7380444 FN673-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g13610 retrotransposon protein, putative, unclassified, expressed SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN2395.SNP.10:7383197 chr10:007383197 0 W/7383197-7383197 FN2395 SNP C -> A AC=1;AN=200;BQB=0.983827;DP=4321;DP4=1952,1870,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.90638e-16;MQSB=0.741159;RPB=0.612404;SGB=52.9314;VDB=0.369649;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W110L|116|LOC_Os10g13620|protein_coding|CODING|LOC_Os10g13620.1|3|1) FN2395.SNP.10:7383242 chr10:007383242 0 W/7383242-7383242 FN2395 SNP G -> A AC=1;AN=200;BQB=0.764315;DP=4429;DP4=1909,1988,18,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.39271e-15;MQSB=0.175865;RPB=0.335029;SGB=-41.238;VDB=0.503212;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A95V|116|LOC_Os10g13620|protein_coding|CODING|LOC_Os10g13620.1|3|1) FN-193.SNP.10:7384552 chr10:007384552 0 W/7384552-7384552 FN-193 Single Base Substitution T-C INTERGENIC HOMO SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1444-S.SNP.10:7387703 chr10:007387703 0 W/7387703-7387703 FN1444-S Single Base Substitution G-A INTRON HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN2338.SNP.10:7388841 chr10:007388841 0 W/7388841-7388841 FN2338 SNP G -> T AC=1;AN=192;BQB=0.391548;DP=4780;DP4=2256,2235,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.85737e-15;MQSB=0.855403;RPB=0.742203;SGB=93.2452;VDB=0.306779;EFF=INTRON(MODIFIER||||521|LOC_Os10g13630|protein_coding|CODING|LOC_Os10g13630.1|5|1),INTRON(MODIFIER||||458|LOC_Os10g13630|protein_coding|CODING|LOC_Os10g13630.2|4|1),INTRON(MODIFIER||||409|LOC_Os10g13630|protein_coding|CODING|LOC_Os10g13630.3|4|1) FN1330-S.SNP.10:7399513 chr10:007399513 0 W/7399513-7399513 FN1330-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2130-S.SNP.10:7405076 chr10:007405076 0 W/7405076-7405076 FN2130-S SNP A -> G AC=1;AN=168;BQB=0.27911;DP=2368;DP4=968,1262,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000422297;MQB=0.000655462;MQSB=3.96806e-33;RPB=0.926251;SGB=19.7539;VDB=0.793023;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.10:7407006 chr10:007407006 0 W/7407006-7407006 FN2482 SNP G -> A AC=1;AN=200;BQB=0.872239;DP=4342;DP4=1896,2166,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46068e-09;MQSB=0.777178;RPB=0.412312;SGB=7.88476;VDB=0.913289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.10:7408964 chr10:007408964 0 W/7408964-7408964 FN2199-S SNP G -> A AC=2;AN=190;BQB=0.989508;DP=3688;DP4=1833,1567,10,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.77809e-08;MQSB=8.06039e-14;RPB=0.51608;SGB=76.4186;VDB=0.0524691;EFF=INTRON(MODIFIER||||161|LOC_Os10g13650|protein_coding|CODING|LOC_Os10g13650.1|1|1) FN4132-S.SNP.10:7409429 chr10:007409429 0 W/7409429-7409429 FN4132-S SNP G -> T AC=1;AN=182;BQB=0.873467;DP=2949;DP4=1609,1228,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.15672e-09;MQSB=0.913076;RPB=0.747299;SGB=-14.8449;VDB=0.655518;EFF=INTRON(MODIFIER||||161|LOC_Os10g13650|protein_coding|CODING|LOC_Os10g13650.1|1|1) FN894-S.SNP.10:7419603 chr10:007419603 0 W/7419603-7419603 FN894-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1353-S.SNP.10:7427861 chr10:007427861 0 W/7427861-7427861 FN1353-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g13690 retrotransposon protein, putative, unclassified, expressed SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN982-S.SNP.10:7438335 chr10:007438335 0 W/7438335-7438335 FN982-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2539-S.SNP.10:7441964 chr10:007441964 0 W/7441964-7441964 FN2539-S SNP C -> A AC=1;AN=198;BQB=0.427464;DP=2815;DP4=1555,1130,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00035524;MQB=2.13961e-07;MQSB=0.00287042;RPB=0.944769;SGB=18.9639;VDB=0.565572;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G137|534|LOC_Os10g13700|protein_coding|CODING|LOC_Os10g13700.2|4|1),UTR_3_PRIME(MODIFIER||336||76|LOC_Os10g13694|protein_coding|CODING|LOC_Os10g13694.2|3|1),UTR_3_PRIME(MODIFIER||80||120|LOC_Os10g13694|protein_coding|CODING|LOC_Os10g13694.1|3|1) FN2539-S.SNP.10:7441965 chr10:007441965 0 W/7441965-7441965 FN2539-S SNP C -> A AC=1;AN=198;BQB=0.322771;DP=2793;DP4=1519,1101,9,5;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000358038;MQB=9.13006e-06;MQSB=0.00314033;RPB=0.998301;SGB=2.96892;VDB=0.324509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G137V|534|LOC_Os10g13700|protein_coding|CODING|LOC_Os10g13700.2|4|1),UTR_3_PRIME(MODIFIER||337||76|LOC_Os10g13694|protein_coding|CODING|LOC_Os10g13694.2|3|1),UTR_3_PRIME(MODIFIER||81||120|LOC_Os10g13694|protein_coding|CODING|LOC_Os10g13694.1|3|1) FN1374-S.SNP.10:7454701 chr10:007454701 0 W/7454701-7454701 FN1374-S Single Base Substitution C-A INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3927-S.SNP.10:7455141 chr10:007455141 0 W/7455141-7455141 FN3927-S SNP A -> T AC=1;AN=158;BQB=0.999935;DP=2295;DP4=1198,1025,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.87496e-11;MQSB=0.992974;RPB=0.679082;SGB=77.6532;VDB=0.189598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.10:7457759 chr10:007457759 0 W/7457759-7457759 FN3565-S SNP G -> A AC=1;AN=188;BQB=0.999451;DP=2631;DP4=1306,1276,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12908e-09;MQSB=0.984821;RPB=0.992173;SGB=43.0708;VDB=0.0496732;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.10:7458702 chr10:007458702 0 W/7458702-7458702 FN-127 Single Base Substitution G-A INTRON HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN511-S.SNP.10:7461442 chr10:007461442 0 W/7461442-7461442 FN511-S Single Base Substitution G-A INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN3411-S.SNP.10:7461546 chr10:007461546 0 W/7461546-7461546 FN3411-S SNP G -> A AC=1;AN=184;BQB=0.884767;DP=2796;DP4=1540,1146,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07405e-07;MQSB=0.994498;RPB=0.95239;SGB=35.7479;VDB=0.689768;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.10:7463387 chr10:007463387 0 W/7463387-7463387 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.668117;DP=4575;DP4=2370,1995,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.66854e-11;MQSB=0.967516;RPB=0.784852;SGB=65.5058;VDB=0.248796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.10:7469532 chr10:007469532 0 W/7469532-7469532 FN2320 SNP C -> T AC=2;AN=192;BQB=0.370044;DP=5185;DP4=2530,2361,22,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.36741e-20;MQSB=0.376177;RPB=0.740975;SGB=153.839;VDB=0.658645;EFF=INTRON(MODIFIER||||381|LOC_Os10g13740|protein_coding|CODING|LOC_Os10g13740.1|1|1) FN2729-S.SNP.10:7470337 chr10:007470337 0 W/7470337-7470337 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.53499;DP=4496;DP4=1919,2360,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01666e-15;MQSB=0.648603;RPB=0.788694;SGB=114.132;VDB=0.68317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.10:7472398 chr10:007472398 0 W/7472398-7472398 FN2212-S SNP T -> C AC=2;AN=190;BQB=0.662253;DP=5171;DP4=2448,2366,34,39;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00154709;MQB=9.86181e-18;MQSB=0.0171237;RPB=0.167797;SGB=326.882;VDB=0.599723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.10:7481409 chr10:007481409 0 W/7481409-7481409 FN2202-S SNP T -> C AC=1;AN=190;BQB=0.651307;DP=5869;DP4=3247,2305,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0294769;MQB=0.0423562;MQSB=2.99013e-36;RPB=0.0269367;SGB=23.6597;VDB=0.257185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.10:7485821 chr10:007485821 0 W/7485821-7485821 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.929171;DP=5102;DP4=2453,2417,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14202e-14;MQSB=0.940612;RPB=0.89184;SGB=69.1109;VDB=0.381715;EFF=INTRON(MODIFIER||||849|LOC_Os10g13770|protein_coding|CODING|LOC_Os10g13770.1|6|1) FN1698-S.SNP.10:7493438 chr10:007493438 0 W/7493438-7493438 FN1698-S SNP G -> A AC=1;AN=188;BQB=0.744677;DP=2585;DP4=1392,1164,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.11216e-05;MQSB=0.946821;RPB=0.614918;SGB=13.3597;VDB=0.980844;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L100|288|LOC_Os10g13790|protein_coding|CODING|LOC_Os10g13790.1|1|1) FN3892-S.SNP.10:7514872 chr10:007514872 0 W/7514872-7514872 FN3892-S SNP T -> C AC=1;AN=158;BQB=0.998801;DP=2730;DP4=1383,1191,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.55897e-06;MQSB=0.999996;RPB=0.367422;SGB=27.3346;VDB=0.187522;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.10:7525217 chr10:007525217 0 W/7525217-7525217 FN576-S Single Base Substitution T-C INTRON HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN591-S.SNP.10:7525379 chr10:007525379 0 W/7525379-7525379 FN591-S Single Base Substitution C-T INTRON HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN1239-S.SNP.10:7531445 chr10:007531445 0 W/7531445-7531445 FN1239-S Single Base Substitution C-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3426-S.SNP.10:7534783 chr10:007534783 0 W/7534783-7534783 FN3426-S SNP T -> A AC=1;AN=184;BQB=0.94421;DP=2676;DP4=1263,1334,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00252e-06;MQSB=0.996082;RPB=0.75527;SGB=25.1826;VDB=0.551648;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.10:7535030 chr10:007535030 0 W/7535030-7535030 FN3476-S SNP A -> G AC=1;AN=184;BQB=0.762465;DP=2245;DP4=1054,1107,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.32287e-08;MQSB=0.988628;RPB=0.727088;SGB=39.2697;VDB=0.495162;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.10:7535167 chr10:007535167 0 W/7535167-7535167 FN-163 Single Base Substitution C-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN1696-S.SNP.10:7537848 chr10:007537848 0 W/7537848-7537848 FN1696-S SNP C -> T AC=1;AN=188;BQB=0.0377831;DP=3522;DP4=1902,1584,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00010386;MQSB=0.962469;RPB=0.341158;SGB=-54.619;VDB=0.363652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.10:7537920 chr10:007537920 0 W/7537920-7537920 FN1573-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g13870 expressed protein SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2340.SNP.10:7541022 chr10:007541022 0 W/7541022-7541022 FN2340 SNP A -> T AC=1;AN=192;BQB=0.911726;DP=4488;DP4=2275,2011,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.33578e-10;MQSB=0.819287;RPB=0.328176;SGB=57.6018;VDB=0.0924374;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.10:7547874 chr10:007547874 0 W/7547874-7547874 FN4133-S SNP C -> T AC=2;AN=182;BQB=0.182789;DP=3032;DP4=1443,1502,22,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.66823e-15;MQSB=0.984729;RPB=0.170593;SGB=119.888;VDB=0.401401;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.10:7549302 chr10:007549302 0 W/7549302-7549302 FN785-S Single Base Substitution A-G INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3057-S.SNP.10:7550906 chr10:007550906 0 W/7550906-7550906 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.7927;DP=3337;DP4=1831,1388,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.0916e-12;MQSB=0.835202;RPB=0.611315;SGB=33.3622;VDB=0.726784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:7553183 chr10:007553183 0 W/7553183-7553183 FN2572-S SNP T -> C AC=1;AN=198;BQB=0.831953;DP=3722;DP4=1545,1783,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.9273e-08;MQSB=0.882131;RPB=0.893979;SGB=26.7492;VDB=0.593111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D209G|269|LOC_Os10g13900|protein_coding|CODING|LOC_Os10g13900.1|2|1) FN3822-S.SNP.10:7556702 chr10:007556702 0 W/7556702-7556702 FN3822-S SNP A -> G AC=1;AN=190;BQB=0.760481;DP=3089;DP4=1614,1371,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09276e-08;MQSB=0.9939;RPB=0.985487;SGB=53.6492;VDB=0.702813;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.10:7575207 chr10:007575207 0 W/7575207-7575207 FN483-S Single Base Substitution A-T INTRON HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2648-S.SNP.10:7579442 chr10:007579442 0 W/7579442-7579442 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.966429;DP=5094;DP4=2726,2118,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.83558e-06;MQSB=0.999398;RPB=0.981433;SGB=13.8539;VDB=0.698487;EFF=INTRON(MODIFIER||||537|LOC_Os10g13940|protein_coding|CODING|LOC_Os10g13940.1|11|1) FN2273-S.SNP.10:7581138 chr10:007581138 0 W/7581138-7581138 FN2273-S SNP G -> A AC=2;AN=190;BQB=0.292059;DP=4923;DP4=2464,2134,29,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.89618e-31;MQSB=0.967383;RPB=0.983051;SGB=58.4968;VDB=0.699751;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R63C|249|LOC_Os10g13950|protein_coding|CODING|LOC_Os10g13950.1|2|1) FN2273-S.SNP.10:7581139 chr10:007581139 0 W/7581139-7581139 FN2273-S SNP T -> A AC=2;AN=190;BQB=0.306818;DP=4911;DP4=2453,2079,33,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.85921e-30;MQSB=0.967206;RPB=0.935757;SGB=66.2662;VDB=0.849388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L62F|249|LOC_Os10g13950|protein_coding|CODING|LOC_Os10g13950.1|2|1) FN870-S.SNP.10:7581946 chr10:007581946 0 W/7581946-7581946 FN870-S Single Base Substitution G-C INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN993-S.SNP.10:7596002 chr10:007596002 0 W/7596002-7596002 FN993-S Single Base Substitution G-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN-362.SNP.10:7596014 chr10:007596014 0 W/7596014-7596014 FN-362 Single Base Substitution T-G INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN551-S.SNP.10:7597613 chr10:007597613 0 W/7597613-7597613 FN551-S Single Base Substitution C-T INTERGENIC HOMO SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3877-S.SNP.10:7602001 chr10:007602001 0 W/7602001-7602001 FN3877-S SNP C -> T AC=1;AN=158;BQB=0.651766;DP=3431;DP4=1870,1468,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=26;MQ0F=0.222093;MQB=0.937263;MQSB=1.53893e-15;RPB=0.995367;SGB=-15.7992;VDB=0.293328;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I348|1964|LOC_Os10g13980|protein_coding|CODING|LOC_Os10g13980.1|1|1) FN2188-S.SNP.10:7602067 chr10:007602067 0 W/7602067-7602067 FN2188-S SNP C -> T AC=2;AN=190;BQB=8.29429e-06;DP=4399;DP4=2066,1938,32,78;HOB=0.020831;ICB=0.494793;MQ=21;MQ0F=0.304615;MQB=0.286968;MQSB=4.44635e-08;RPB=0.65568;SGB=-956.019;VDB=0.00137498;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D370|1964|LOC_Os10g13980|protein_coding|CODING|LOC_Os10g13980.1|1|1) FN967-S.SNP.10:7603952 chr10:007603952 0 W/7603952-7603952 FN967-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g13980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2289.SNP.10:7618566 chr10:007618566 0 W/7618566-7618566 FN2289 SNP C -> A AC=1;AN=192;BQB=0.936917;DP=5192;DP4=2428,2520,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.26963e-16;MQSB=0.960906;RPB=0.955508;SGB=57.1218;VDB=0.0846254;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.10:7620817 chr10:007620817 0 W/7620817-7620817 FN1760-S SNP T -> C AC=1;AN=188;BQB=0.0224976;DP=2836;DP4=974,1834,2,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00352609;MQB=0.00532849;MQSB=0.000315166;RPB=0.618545;SGB=-54.619;VDB=0.998585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.10:7632178 chr10:007632178 0 W/7632178-7632178 FN2707-S SNP A -> T AC=1;AN=200;BQB=0.359409;DP=6321;DP4=2934,3098,13,10;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0667616;MQB=0.833591;MQSB=0.00105214;RPB=0.994498;SGB=45.1159;VDB=0.327666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.10:7636536 chr10:007636536 0 W/7636536-7636536 FN3545-S SNP G -> C AC=1;AN=188;BQB=0.221187;DP=2490;DP4=1310,1044,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.04453e-05;MQSB=0.742124;RPB=0.554852;SGB=13.3597;VDB=0.207563;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E48Q|620|LOC_Os10g14040|protein_coding|CODING|LOC_Os10g14040.1|3|1) FN276-S.SNP.10:7638077 chr10:007638077 0 W/7638077-7638077 FN276-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g14040 transposon protein, putative, unclassified, expressed SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN2537-S.SNP.10:7638371 chr10:007638371 0 W/7638371-7638371 FN2537-S SNP T -> C AC=1;AN=198;BQB=0.419729;DP=4215;DP4=2120,1936,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.32248e-07;MQSB=0.529354;RPB=0.962748;SGB=31.9395;VDB=0.288302;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L418S|620|LOC_Os10g14040|protein_coding|CODING|LOC_Os10g14040.1|5|1) FN2671-S.SNP.10:7644605 chr10:007644605 0 W/7644605-7644605 FN2671-S SNP T -> A AC=1;AN=200;BQB=0.737533;DP=4735;DP4=2350,2160,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49044e-05;MQSB=0.998636;RPB=0.739068;SGB=11.2488;VDB=0.881279;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.10:7646067 chr10:007646067 0 W/7646067-7646067 FN3749-S SNP C -> T AC=1;AN=190;BQB=0.978566;DP=3178;DP4=1495,1521,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08092e-08;MQSB=0.723154;RPB=0.70196;SGB=28.7675;VDB=0.0579806;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.10:7652730 chr10:007652730 0 W/7652730-7652730 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.592956;DP=4619;DP4=2134,2129,12,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0129898;MQB=2.71106e-06;MQSB=0.203703;RPB=0.933143;SGB=79.9264;VDB=0.229675;EFF=INTERGENIC(MODIFIER||||||||||1) FN3959-S.SNP.10:7655181 chr10:007655181 0 W/7655181-7655181 FN3959-S SNP T -> C AC=1;AN=168;BQB=0.944222;DP=2705;DP4=1449,1143,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.81312e-08;MQSB=0.507247;RPB=0.615412;SGB=34.748;VDB=0.735684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1206-S.SNP.10:7656358 chr10:007656358 0 W/7656358-7656358 FN1206-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g14070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1037, Mutant_ID: FN1206-S, Generation: M2, Mutations: 53, Genes: 47, Seed availability: Yes. FN2739-S.SNP.10:7659040 chr10:007659040 0 W/7659040-7659040 FN2739-S SNP A -> G AC=1;AN=200;BQB=0.96749;DP=5075;DP4=2310,2371,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63211e-17;MQSB=0.98935;RPB=0.440031;SGB=-41.6328;VDB=0.372184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.10:7666346 chr10:007666346 0 W/7666346-7666346 FN1116-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g14120 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN2708-S.SNP.10:7670399 chr10:007670399 0 W/7670399-7670399 FN2708-S SNP C -> G AC=1;AN=200;BQB=0.77982;DP=6668;DP4=3818,2590,6,13;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.147121;MQB=0.153069;MQSB=0;RPB=0.332892;SGB=-12.5051;VDB=0.267371;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.10:7672222 chr10:007672222 0 W/7672222-7672222 FN4139-S SNP G -> A AC=1;AN=170;BQB=0.837612;DP=2598;DP4=1315,1214,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.194765;MQB=0.906051;MQSB=0;RPB=0.96905;SGB=56.7575;VDB=0.458705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R7W|499|LOC_Os10g14130|protein_coding|CODING|LOC_Os10g14130.1|1|1) FN3460-S.SNP.10:7680633 chr10:007680633 0 W/7680633-7680633 FN3460-S SNP G -> A AC=2;AN=184;BQB=0.715103;DP=2828;DP4=1351,1370,3,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.11453e-10;MQSB=0.884162;RPB=0.960877;SGB=28.3187;VDB=0.584599;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.10:7681812 chr10:007681812 0 W/7681812-7681812 FN2324 SNP G -> T AC=1;AN=192;BQB=0.997553;DP=5198;DP4=2423,2354,17,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.881e-19;MQSB=0.999998;RPB=0.789408;SGB=80.2009;VDB=0.884201;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.10:7682351 chr10:007682351 0 W/7682351-7682351 FN631-S Single Base Substitution C-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN4181-S.SNP.10:7683140 chr10:007683140 0 W/7683140-7683140 FN4181-S SNP A -> C AC=1;AN=170;BQB=0.623649;DP=2062;DP4=706,1271,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00387973;MQB=0.00295062;MQSB=0.030614;RPB=0.999964;SGB=21.1076;VDB=0.20008;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.10:7684033 chr10:007684033 0 W/7684033-7684033 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN4082-S.SNP.10:7684257 chr10:007684257 0 W/7684257-7684257 FN4082-S SNP T -> A AC=1;AN=182;BQB=0.989933;DP=2848;DP4=1593,1114,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.95467e-06;MQSB=0.889229;RPB=0.830519;SGB=28.6061;VDB=0.310584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.10:7692097 chr10:007692097 0 W/7692097-7692097 FN2378 SNP T -> C AC=1;AN=192;BQB=0.911095;DP=4716;DP4=2302,1984,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000212044;MQB=2.29768e-11;MQSB=0.997103;RPB=0.984255;SGB=-9.12519;VDB=0.501042;EFF=UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.2|2|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.4|4|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.6|3|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.7|2|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.5|4|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.8|2|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.9|3|1),UTR_5_PRIME(MODIFIER||717||465|LOC_Os10g14180|protein_coding|CODING|LOC_Os10g14180.3|4|1) FN588-S.SNP.10:7692113 chr10:007692113 0 W/7692113-7692113 FN588-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN588-S.SNP.10:7692114 chr10:007692114 0 W/7692114-7692114 FN588-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN4011-S.SNP.10:7704969 chr10:007704969 0 W/7704969-7704969 FN4011-S SNP G -> C AC=1;AN=168;BQB=0.972483;DP=2615;DP4=1188,1273,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.32037e-11;MQSB=0.992114;RPB=0.987123;SGB=11.3448;VDB=0.404131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.10:7705833 chr10:007705833 0 W/7705833-7705833 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.804738;DP=4733;DP4=2370,2125,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60923e-11;MQSB=0.966908;RPB=0.98626;SGB=42.5108;VDB=0.449443;EFF=INTRON(MODIFIER||||67|LOC_Os10g14210|protein_coding|CODING|LOC_Os10g14210.1|1|1) FN1394-S.SNP.10:7715842 chr10:007715842 0 W/7715842-7715842 FN1394-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2780-S.SNP.10:7716993 chr10:007716993 0 W/7716993-7716993 FN2780-S SNP A -> T AC=1;AN=198;BQB=0.973885;DP=4083;DP4=2108,1789,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.30577e-12;MQSB=0.999882;RPB=0.0758081;SGB=37.1297;VDB=0.244876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1407-S.SNP.10:7723928 chr10:007723928 0 W/7723928-7723928 FN1407-S Single Base Substitution G-A INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1368-S.SNP.10:7748110 chr10:007748110 0 W/7748110-7748110 FN1368-S Single Base Substitution C-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN4084-S.SNP.10:7750685 chr10:007750685 0 W/7750685-7750685 FN4084-S SNP C -> T AC=1;AN=182;BQB=0.712165;DP=3550;DP4=1683,1797,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.33838e-05;MQSB=0.639936;RPB=0.804653;SGB=44.1115;VDB=0.361713;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L813|1386|LOC_Os10g14795|protein_coding|CODING|LOC_Os10g14795.1|6|1) FN515-S.SNP.10:7751429 chr10:007751429 0 W/7751429-7751429 FN515-S Single Base Substitution C-A INTRON HET SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN429-S.SNP.10:7752556 chr10:007752556 0 W/7752556-7752556 FN429-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g14795 retrotransposon protein, putative, unclassified, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN4063-S.SNP.10:7754218 chr10:007754218 0 W/7754218-7754218 FN4063-S SNP G -> A AC=2;AN=168;BQB=0.167094;DP=3085;DP4=1484,1448,19,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.06204e-12;MQSB=0.999374;RPB=0.331793;SGB=117.088;VDB=0.594407;EFF=INTERGENIC(MODIFIER||||||||||1) FN-24.SNP.10:7769718 chr10:007769718 0 W/7769718-7769718 FN-24 Single Base Substitution C-T INTERGENIC Homo SNo: 24, Mutant_ID: FN-24, Generation: M2, Mutations: 27, Genes: 8, Seed availability: Yes. FN1325-S.SNP.10:7774595 chr10:007774595 0 W/7774595-7774595 FN1325-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g14850 retrotransposon, putative, centromere-specific, expressed SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3430-S.SNP.10:7776597 chr10:007776597 0 W/7776597-7776597 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.961849;DP=2974;DP4=1626,1287,10,1;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00268998;MQB=7.92815e-05;MQSB=0.968099;RPB=0.582935;SGB=44.2207;VDB=0.0631957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.10:7776957 chr10:007776957 0 W/7776957-7776957 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.95894;DP=2905;DP4=1464,1347,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0144578;MQB=0.278748;MQSB=0.774296;RPB=0.685021;SGB=44.5415;VDB=0.580569;EFF=INTERGENIC(MODIFIER||||||||||1) FN3389-S.SNP.10:7781187 chr10:007781187 0 W/7781187-7781187 FN3389-S SNP G -> A AC=1;AN=184;BQB=0.947084;DP=2772;DP4=1226,1466,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.60218e-07;MQSB=0.99099;RPB=0.97194;SGB=25.1826;VDB=0.705724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.10:7787221 chr10:007787221 0 W/7787221-7787221 FN3808-S SNP G -> T AC=1;AN=190;BQB=0.903577;DP=3121;DP4=1642,1374,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00416533;MQB=0.00644703;MQSB=0.000108865;RPB=0.685169;SGB=23.6597;VDB=0.403762;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.10:7787636 chr10:007787636 0 W/7787636-7787636 FN3453-S SNP A -> T AC=1;AN=184;BQB=0.955607;DP=2919;DP4=1202,1563,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.10421e-09;MQSB=0.643496;RPB=0.620251;SGB=28.3187;VDB=0.067626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.10:7788710 chr10:007788710 0 W/7788710-7788710 FN1758-S SNP G -> A AC=1;AN=188;BQB=0.397563;DP=4071;DP4=2062,1967,12,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.25221e-10;MQSB=0.996727;RPB=0.621141;SGB=-40.1048;VDB=0.279331;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.10:7792386 chr10:007792386 0 W/7792386-7792386 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.511202;DP=2992;DP4=1634,1271,15,11;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.00668449;MQB=0.000330185;MQSB=0.154495;RPB=0.8112;SGB=112.585;VDB=0.461841;EFF=INTRON(MODIFIER||||148|LOC_Os10g14889|protein_coding|CODING|LOC_Os10g14889.1|1|1) FN2629-S.SNP.10:7792754 chr10:007792754 0 W/7792754-7792754 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.586304;DP=4820;DP4=2367,2236,14,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0128631;MQB=0.939845;MQSB=0.997172;RPB=0.263239;SGB=87.1368;VDB=0.425821;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.10:7794856 chr10:007794856 0 W/7794856-7794856 FN244-S Single Base Substitution G-A INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN3400-S.SNP.10:7798306 chr10:007798306 0 W/7798306-7798306 FN3400-S SNP C -> A AC=1;AN=184;BQB=0.952217;DP=3223;DP4=1649,1489,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.88434e-08;MQSB=0.996017;RPB=0.216309;SGB=48.7425;VDB=0.150847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:7799550 chr10:007799550 0 W/7799550-7799550 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.964376;DP=2924;DP4=1540,1292,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.12009e-10;MQSB=0.466547;RPB=0.743994;SGB=14.2064;VDB=0.213937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.10:7800580 chr10:007800580 0 W/7800580-7800580 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.998419;DP=3812;DP4=2174,1446,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=1.8021e-06;MQSB=0.917467;RPB=0.767149;SGB=49.5489;VDB=0.659945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.10:7800584 chr10:007800584 0 W/7800584-7800584 FN2537-S SNP C -> T AC=1;AN=198;BQB=0.444187;DP=3834;DP4=2173,1496,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000260824;MQB=2.25224e-06;MQSB=0.780985;RPB=0.813648;SGB=32.9588;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.10:7806489 chr10:007806489 0 W/7806489-7806489 FN2187-S SNP A -> G AC=2;AN=190;BQB=0.99473;DP=4412;DP4=2352,1793,23,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15565e-26;MQSB=0.743928;RPB=0.569591;SGB=153.378;VDB=0.510007;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.10:7812814 chr10:007812814 0 W/7812814-7812814 FN4166-S SNP G -> A AC=1;AN=170;BQB=0.992024;DP=695;DP4=446,221,4,2;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.002587;MQSB=2.81133e-07;RPB=0.966109;SGB=21.2191;VDB=0.0411825;EFF=UTR_3_PRIME(MODIFIER||693||364|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.1|7|1),UTR_3_PRIME(MODIFIER||693||270|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.5|6|1),INTRON(MODIFIER||||364|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.2|7|1) FN3725-S.SNP.10:7814808 chr10:007814808 0 W/7814808-7814808 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.737326;DP=2916;DP4=1478,1327,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000342936;MQB=2.57149e-08;MQSB=0.998323;RPB=0.997235;SGB=53.8699;VDB=0.0758628;EFF=UTR_5_PRIME(MODIFIER||234||251|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.7|3|1),UTR_5_PRIME(MODIFIER||234||251|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.3|2|1),INTRON(MODIFIER||||364|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.1|3|1),INTRON(MODIFIER||||364|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.2|3|1),INTRON(MODIFIER||||270|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.5|2|1),INTRON(MODIFIER||||310|LOC_Os10g14920|protein_coding|CODING|LOC_Os10g14920.6|3|1) FN1156-XA21.SNP.10:7819217 chr10:007819217 0 W/7819217-7819217 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1156-XA21.SNP.10:7819219 chr10:007819219 0 W/7819219-7819219 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3731-S.SNP.10:7827193 chr10:007827193 0 W/7827193-7827193 FN3731-S SNP T -> C AC=1;AN=190;BQB=0.895845;DP=2422;DP4=1243,1066,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19959e-06;MQSB=0.901759;RPB=0.600766;SGB=49.0954;VDB=0.973705;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.10:7831752 chr10:007831752 0 W/7831752-7831752 W7-1-1 Single Base Substitution G-T INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN3700-S.SNP.10:7833034 chr10:007833034 0 W/7833034-7833034 FN3700-S SNP C -> T AC=1;AN=190;BQB=0.997436;DP=2670;DP4=1361,1213,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57051e-07;MQSB=0.985116;RPB=0.948796;SGB=53.6492;VDB=0.409779;EFF=INTERGENIC(MODIFIER||||||||||1) FN753-S.SNP.10:7833272 chr10:007833272 0 W/7833272-7833272 FN753-S Single Base Substitution C-T INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN503-S.SNP.10:7833931 chr10:007833931 0 W/7833931-7833931 FN503-S Single Base Substitution C-T INTRON HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN698-S.SNP.10:7843931 chr10:007843931 0 W/7843931-7843931 FN698-S Single Base Substitution C-A INTERGENIC HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN630-S.SNP.10:7848848 chr10:007848848 0 W/7848848-7848848 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN2579-S.SNP.10:7849650 chr10:007849650 0 W/7849650-7849650 FN2579-S SNP A -> G AC=1;AN=188;BQB=0.80175;DP=3759;DP4=1919,1653,12,22;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000266028;MQB=1.41986e-16;MQSB=0.865905;RPB=0.364753;SGB=73.4614;VDB=0.617407;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.10:7850412 chr10:007850412 0 W/7850412-7850412 FN2556-S SNP T -> C AC=2;AN=198;BQB=0.807855;DP=4457;DP4=1977,2154,31,33;HOB=0.019998;ICB=0.495001;MQ=32;MQ0F=0.0827911;MQB=0.504425;MQSB=1.34474e-11;RPB=0.16923;SGB=246.324;VDB=0.161227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K31E|50|LOC_Os10g15000|protein_coding|CODING|LOC_Os10g15000.1|2|1) FN2754-S.SNP.10:7855800 chr10:007855800 0 W/7855800-7855800 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.664026;DP=4693;DP4=2311,2141,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.92796e-15;MQSB=0.491654;RPB=0.333686;SGB=22.3313;VDB=0.379545;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.10:7858941 chr10:007858941 0 W/7858941-7858941 FN2209-S SNP T -> A AC=1;AN=190;BQB=0.966106;DP=5945;DP4=3247,2186,24,26;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0849453;MQB=0.267256;MQSB=2.17754e-09;RPB=0.979272;SGB=3.9482;VDB=0.493602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K378I|694|LOC_Os10g15010|protein_coding|CODING|LOC_Os10g15010.1|3|1) FN4022-S.SNP.10:7860117 chr10:007860117 0 W/7860117-7860117 FN4022-S SNP G -> T AC=2;AN=168;BQB=0.999587;DP=2837;DP4=985,1718,16,13;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0447656;MQB=0.211965;MQSB=1.52944e-11;RPB=0.496081;SGB=56.2162;VDB=0.455766;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A58|694|LOC_Os10g15010|protein_coding|CODING|LOC_Os10g15010.1|1|1) FN3415-S.SNP.10:7881440 chr10:007881440 0 W/7881440-7881440 FN3415-S SNP C -> T AC=1;AN=184;BQB=0.93899;DP=4247;DP4=2301,1845,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00188368;MQB=1.34468e-10;MQSB=0.959039;RPB=0.377361;SGB=84.9167;VDB=0.238084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.10:7881441 chr10:007881441 0 W/7881441-7881441 FN3415-S SNP G -> A AC=1;AN=184;BQB=0.710609;DP=4271;DP4=2308,1858,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00210723;MQB=2.42042e-11;MQSB=0.991981;RPB=0.425534;SGB=80.3949;VDB=0.30673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.10:7883407 chr10:007883407 0 W/7883407-7883407 FN3968-S SNP C -> T AC=1;AN=168;BQB=0.649524;DP=2719;DP4=1454,1134,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00478117;MQB=0.00323096;MQSB=0.0642839;RPB=0.995007;SGB=36.7696;VDB=0.972572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E775K|784|LOC_Os10g15060|protein_coding|CODING|LOC_Os10g15060.1|3|1) FN1258-S.SNP.10:7883421 chr10:007883421 0 W/7883421-7883421 FN1258-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g15060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN2677-S.SNP.10:7887128 chr10:007887128 0 W/7887128-7887128 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.773154;DP=5479;DP4=2893,2353,5,6;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.162438;MQB=0.975521;MQSB=0.00207001;RPB=0.803309;SGB=45.0543;VDB=0.643457;EFF=INTRON(MODIFIER||||784|LOC_Os10g15060|protein_coding|CODING|LOC_Os10g15060.1|1|1) FN3753-S.SNP.10:7890817 chr10:007890817 0 W/7890817-7890817 FN3753-S SNP G -> A AC=1;AN=190;BQB=0.905274;DP=2477;DP4=1111,1283,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000403714;MQB=1.63114e-08;MQSB=0.76091;RPB=0.867897;SGB=71.8647;VDB=0.4996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.10:7893125 chr10:007893125 0 W/7893125-7893125 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.844489;DP=2588;DP4=1406,1088,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000386399;MQB=4.24289e-07;MQSB=0.540527;RPB=0.95393;SGB=36.1006;VDB=0.971012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1369H|1604|LOC_Os10g15079|protein_coding|CODING|LOC_Os10g15079.1|8|1) FN1345-S.SNP.10:7895494 chr10:007895494 0 W/7895494-7895494 FN1345-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g15079 retrotransposon protein, putative, unclassified, expressed SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2663-S.SNP.10:7899135 chr10:007899135 0 W/7899135-7899135 FN2663-S SNP C -> T AC=2;AN=200;BQB=0.896209;DP=4089;DP4=1770,2049,12,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000489117;MQB=1.43421e-20;MQSB=0.843268;RPB=0.606075;SGB=146.368;VDB=0.24208;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E136|1604|LOC_Os10g15079|protein_coding|CODING|LOC_Os10g15079.1|1|1) FN2663-S.SNP.10:7899136 chr10:007899136 0 W/7899136-7899136 FN2663-S SNP T -> C AC=2;AN=200;BQB=0.277051;DP=4099;DP4=1607,1849,18,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000243962;MQB=4.34625e-24;MQSB=0.96012;RPB=0.779921;SGB=-95.971;VDB=0.227882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E136G|1604|LOC_Os10g15079|protein_coding|CODING|LOC_Os10g15079.1|1|1) FN1173-S.SNP.10:7899905 chr10:007899905 0 W/7899905-7899905 FN1173-S Single Base Substitution C-T INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1486-S.SNP.10:7904600 chr10:007904600 0 W/7904600-7904600 FN1486-S Single Base Substitution C-G INTERGENIC Homo SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN2116-S.SNP.10:7904602 chr10:007904602 0 W/7904602-7904602 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.997004;DP=2053;DP4=1253,739,13,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.16689e-10;MQSB=0.967434;RPB=0.479527;SGB=-37.2282;VDB=0.081146;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.10:7905727 chr10:007905727 0 W/7905727-7905727 FN2496 SNP C -> A AC=1;AN=200;BQB=0.400478;DP=4156;DP4=2109,1786,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000240616;MQB=8.06116e-13;MQSB=0.907946;RPB=0.759367;SGB=27.1468;VDB=0.660398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.10:7910050 chr10:007910050 0 W/7910050-7910050 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.885565;DP=4141;DP4=1494,2342,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0135233;MQB=0.0220262;MQSB=0.498152;RPB=0.659151;SGB=1.00337;VDB=0.6928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.10:7911218 chr10:007911218 0 W/7911218-7911218 FN1401-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2780-S.SNP.10:7915984 chr10:007915984 0 W/7915984-7915984 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.299195;DP=3967;DP4=1950,1812,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000756239;MQB=2.25474e-08;MQSB=4.24344e-06;RPB=0.744084;SGB=-38.6649;VDB=0.813359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.10:7922082 chr10:007922082 0 W/7922082-7922082 FN3924-S SNP G -> A AC=2;AN=158;BQB=0.619353;DP=2093;DP4=938,1074,14,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.70768e-15;MQSB=0.296233;RPB=0.218048;SGB=116.978;VDB=0.771332;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.10:7931804 chr10:007931804 0 W/7931804-7931804 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.932686;DP=2897;DP4=1493,1310,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000345185;MQB=9.9243e-11;MQSB=0.858381;RPB=0.779974;SGB=71.6954;VDB=0.0678886;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M639I|986|LOC_Os10g15130|protein_coding|CODING|LOC_Os10g15130.1|1|1) FN4109-S.SNP.10:7932276 chr10:007932276 0 W/7932276-7932276 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.984751;DP=2985;DP4=1481,1392,9,4;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00301508;MQB=2.77123e-06;MQSB=0.000136922;RPB=0.398903;SGB=53.1331;VDB=0.830794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S482F|986|LOC_Os10g15130|protein_coding|CODING|LOC_Os10g15130.1|1|1) FN185-2_3_4.SNP.10:7935520 chr10:007935520 0 W/7935520-7935520 FN185-2_3_4 SNP C -> T AC=1;AN=188;BQB=0.00505834;DP=2968;DP4=1912,996,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000673854;MQB=0.0408915;MQSB=2.54499e-05;RPB=0.806496;SGB=-61.9025;VDB=0.563038;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.10:7935575 chr10:007935575 0 W/7935575-7935575 FN835-S Single Base Substitution T-G INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN418-S.SNP.10:7935983 chr10:007935983 0 W/7935983-7935983 FN418-S Single Base Substitution T-C INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2281.SNP.10:7938013 chr10:007938013 0 W/7938013-7938013 FN2281 SNP G -> A AC=2;AN=192;BQB=0.448889;DP=4972;DP4=2499,2208,24,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000201126;MQB=1.37408e-31;MQSB=0.760095;RPB=0.599872;SGB=131.488;VDB=0.972066;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.10:7938772 chr10:007938772 0 W/7938772-7938772 FN-161 Single Base Substitution G-A INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1375-S.SNP.10:7944190 chr10:007944190 0 W/7944190-7944190 FN1375-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g15150 expressed protein SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN560-S.SNP.10:7954547 chr10:007954547 0 W/7954547-7954547 FN560-S Single Base Substitution A-G INTRON HET SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN1324-S.SNP.10:7955513 chr10:007955513 0 W/7955513-7955513 FN1324-S Single Base Substitution T-G INTRON HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2683-S.SNP.10:7955732 chr10:007955732 0 W/7955732-7955732 FN2683-S SNP C -> T AC=1;AN=200;BQB=0.349499;DP=4673;DP4=2145,2276,4,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87735e-10;MQSB=0.922509;RPB=0.985288;SGB=12.7003;VDB=0.462817;EFF=INTRON(MODIFIER||||257|LOC_Os10g15390|protein_coding|CODING|LOC_Os10g15390.1|2|1),INTRON(MODIFIER||||197|LOC_Os10g15390|protein_coding|CODING|LOC_Os10g15390.2|2|1) FN4069-S.SNP.10:7955911 chr10:007955911 0 W/7955911-7955911 FN4069-S SNP C -> T AC=2;AN=182;BQB=0.944026;DP=3052;DP4=1348,1570,27,38;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.09187e-36;MQSB=0.922361;RPB=0.284576;SGB=245.197;VDB=0.281063;EFF=INTRON(MODIFIER||||257|LOC_Os10g15390|protein_coding|CODING|LOC_Os10g15390.1|2|1),INTRON(MODIFIER||||197|LOC_Os10g15390|protein_coding|CODING|LOC_Os10g15390.2|2|1) FN874-S.SNP.10:7958399 chr10:007958399 0 W/7958399-7958399 FN874-S Single Base Substitution T-G INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3923-S.SNP.10:7968193 chr10:007968193 0 W/7968193-7968193 FN3923-S SNP T -> A AC=2;AN=158;BQB=0.991115;DP=2305;DP4=1161,1018,7,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.70639e-12;MQSB=0.989073;RPB=0.0923233;SGB=-15.7992;VDB=0.447291;EFF=INTERGENIC(MODIFIER||||||||||1) FN4151-S.SNP.10:7974625 chr10:007974625 0 W/7974625-7974625 FN4151-S SNP G -> A AC=1;AN=170;BQB=0.997536;DP=2572;DP4=1476,1015,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00155521;MQB=1.69199e-07;MQSB=0.631553;RPB=0.910041;SGB=70.0854;VDB=0.981032;EFF=INTERGENIC(MODIFIER||||||||||1) FN3888-S.SNP.10:7976099 chr10:007976099 0 W/7976099-7976099 FN3888-S SNP G -> A AC=2;AN=158;BQB=0.805555;DP=2182;DP4=1012,1067,15,26;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00320807;MQB=1.22169e-19;MQSB=0.696016;RPB=0.683832;SGB=143.672;VDB=0.557624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.10:7982868 chr10:007982868 0 W/7982868-7982868 FN3743-S SNP C -> T AC=1;AN=190;BQB=0.983184;DP=2843;DP4=1368,1318,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18541e-05;MQSB=0.969062;RPB=0.838257;SGB=39.9877;VDB=0.439806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.10:7984644 chr10:007984644 0 W/7984644-7984644 FN3505-S SNP G -> C AC=1;AN=188;BQB=0.999943;DP=2784;DP4=1261,1435,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.66716e-07;MQSB=0.844674;RPB=0.25023;SGB=35.9843;VDB=0.594734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.10:7986235 chr10:007986235 0 W/7986235-7986235 FN2551-S SNP T -> G AC=1;AN=198;BQB=0.984039;DP=4103;DP4=1925,1957,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.86174e-09;MQSB=0.568963;RPB=0.820244;SGB=58.1246;VDB=0.786942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.10:7988300 chr10:007988300 0 W/7988300-7988300 FN2313 SNP T -> C AC=1;AN=192;BQB=0.586669;DP=3984;DP4=1980,1761,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000251004;MQB=1.57986e-11;MQSB=0.220404;RPB=0.572583;SGB=-11.9469;VDB=0.349244;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L90|312|LOC_Os10g15330|protein_coding|CODING|LOC_Os10g15330.1|3|1) FN3676-S.SNP.10:7988683 chr10:007988683 0 W/7988683-7988683 FN3676-S SNP T -> C AC=1;AN=190;BQB=0.982705;DP=2810;DP4=1457,1207,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.86383e-08;MQSB=0.934691;RPB=0.539232;SGB=21.1058;VDB=0.0280438;EFF=INTRON(MODIFIER||||312|LOC_Os10g15330|protein_coding|CODING|LOC_Os10g15330.1|1|1) FN501-S.SNP.10:7992525 chr10:007992525 0 W/7992525-7992525 FN501-S Single Base Substitution T-G INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN2792-S.SNP.10:7995739 chr10:007995739 0 W/7995739-7995739 FN2792-S SNP A -> C AC=2;AN=198;BQB=0.986205;DP=3552;DP4=1608,1505,16,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.04716e-13;MQSB=8.46574e-06;RPB=0.720533;SGB=127.666;VDB=0.866529;EFF=UTR_5_PRIME(MODIFIER||341||195|LOC_Os10g15310|protein_coding|CODING|LOC_Os10g15310.1|1|1),UTR_5_PRIME(MODIFIER||341||195|LOC_Os10g15310|protein_coding|CODING|LOC_Os10g15310.2|1|1),UTR_5_PRIME(MODIFIER||341||195|LOC_Os10g15310|protein_coding|CODING|LOC_Os10g15310.3|1|1),UTR_5_PRIME(MODIFIER||341||195|LOC_Os10g15310|protein_coding|CODING|LOC_Os10g15310.5|1|1),UTR_5_PRIME(MODIFIER||341||195|LOC_Os10g15310|protein_coding|CODING|LOC_Os10g15310.4|1|1) FN2308.SNP.10:7998828 chr10:007998828 0 W/7998828-7998828 FN2308 SNP G -> A AC=1;AN=192;BQB=0.229266;DP=4671;DP4=1889,2177,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000428174;MQB=1.67545e-06;MQSB=1.52735e-09;RPB=0.41911;SGB=-37.0704;VDB=0.152276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.10:8000369 chr10:008000369 0 W/8000369-8000369 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.0516728;DP=4419;DP4=2096,2063,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.45605e-11;MQSB=0.22982;RPB=0.981914;SGB=79.6954;VDB=0.540983;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.10:8012848 chr10:008012848 0 W/8012848-8012848 FN2739-S SNP G -> T AC=1;AN=200;BQB=0.767532;DP=4544;DP4=2191,2044,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56531e-11;MQSB=0.92523;RPB=0.868896;SGB=51.0851;VDB=0.773784;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.10:8019349 chr10:008019349 0 W/8019349-8019349 FN1636-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os10g15270 retrotransposon protein, putative, unclassified, expressed SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1247-S.SNP.10:8023123 chr10:008023123 0 W/8023123-8023123 FN1247-S Single Base Substitution G-A INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN1525-S.SNP.10:8025425 chr10:008025425 0 W/8025425-8025425 FN1525-S Single Base Substitution C-T INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN224-S.SNP.10:8029133 chr10:008029133 0 W/8029133-8029133 FN224-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g15250 retrotransposon protein, putative, unclassified, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1541-S.SNP.10:8033174 chr10:008033174 0 W/8033174-8033174 FN1541-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g15250 retrotransposon protein, putative, unclassified, expressed SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN185-2_3_4.SNP.10:8034398 chr10:008034398 0 W/8034398-8034398 FN185-2_3_4 SNP T -> C AC=1;AN=188;BQB=0.241507;DP=5745;DP4=3236,2436,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00167741;MQSB=0.178138;RPB=0.523744;SGB=10.1681;VDB=0.309556;EFF=SPLICE_SITE_REGION(LOW||||285|LOC_Os10g15240|protein_coding|CODING|LOC_Os10g15240.1|6|1),INTRON(MODIFIER||||285|LOC_Os10g15240|protein_coding|CODING|LOC_Os10g15240.1|6|1) FN_827-1.SNP.10:8042546 chr10:008042546 0 W/8042546-8042546 FN_827-1 Single Base Substitution G-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN_829-2-5.SNP.10:8047081 chr10:008047081 0 W/8047081-8047081 FN_829-2-5 Single Base Substitution A-T Homo LOC_Os10g15220 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN2147-S.SNP.10:8051654 chr10:008051654 0 W/8051654-8051654 FN2147-S SNP A -> G AC=1;AN=168;BQB=5.49212e-06;DP=4907;DP4=2713,1867,18,16;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00183411;MQB=0.234029;MQSB=6.02051e-31;RPB=0.791927;SGB=-469.578;VDB=0.784015;EFF=INTRON(MODIFIER||||723|LOC_Os10g15210|protein_coding|CODING|LOC_Os10g15210.1|3|1) FN1156-XA21.SNP.10:8053698 chr10:008053698 0 W/8053698-8053698 FN1156-XA21 Single Base Substitution A-G INTRON HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN1585-S.SNP.10:8054693 chr10:008054693 0 W/8054693-8054693 FN1585-S Single Base Substitution A-C INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2088-S.SNP.10:8065583 chr10:008065583 0 W/8065583-8065583 FN2088-S SNP A -> T AC=1;AN=168;BQB=0.145782;DP=6111;DP4=2373,3671,16,26;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=4.47875e-12;MQSB=0.937081;RPB=0.290992;SGB=-144.307;VDB=0.505496;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.10:8070886 chr10:008070886 0 W/8070886-8070886 FN-370 Single Base Substitution A-G UTR_5_PRIME HET SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3630-S.SNP.10:8072920 chr10:008072920 0 W/8072920-8072920 FN3630-S SNP C -> G AC=1;AN=190;BQB=0.81279;DP=2736;DP4=1244,1376,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0266813;MQB=0.0823194;MQSB=3.01323e-08;RPB=0.991513;SGB=36.1006;VDB=0.502891;EFF=UTR_5_PRIME(MODIFIER||386||104|LOC_Os10g15164|protein_coding|CODING|LOC_Os10g15164.1|4|1) FN2325.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN2325 SNP T -> C AC=2;AN=192;BQB=0.995521;DP=4947;DP4=2358,2282,17,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.79388e-15;MQSB=0.990391;RPB=0.999322;SGB=67.3792;VDB=0.364988;EFF=INTERGENIC(MODIFIER||||||||||1) FN3306-S.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN3306-S SNP T -> C AC=1;AN=184;BQB=0.921571;DP=2941;DP4=1427,1370,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31736e-09;MQSB=0.673696;RPB=0.700137;SGB=42.7914;VDB=0.706974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3424-S.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN3424-S SNP T -> C AC=2;AN=184;BQB=0.960839;DP=3108;DP4=1471,1470,17,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.13918e-19;MQSB=0.973595;RPB=0.996689;SGB=106.184;VDB=0.356357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN3743-S SNP T -> C AC=2;AN=190;BQB=0.993264;DP=3124;DP4=1441,1479,17,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.12619e-20;MQSB=0.999705;RPB=0.999663;SGB=121.394;VDB=0.431542;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN4081-S SNP T -> C AC=2;AN=182;BQB=0.925802;DP=3283;DP4=1518,1614,12,21;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.07636e-17;MQSB=0.901427;RPB=0.577741;SGB=143.35;VDB=0.257275;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.10:8077406 chr10:008077406 0 W/8077406-8077406 FN980-S Single Base Substitution T-C INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1623-S.SNP.10:8080302 chr10:008080302 0 W/8080302-8080302 FN1623-S Single Base Substitution C-T INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN3601-S.SNP.10:8080976 chr10:008080976 0 W/8080976-8080976 FN3601-S SNP T -> C AC=1;AN=190;BQB=0.996596;DP=3091;DP4=1779,1217,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00129408;MQB=2.15781e-06;MQSB=4.72462e-07;RPB=0.602734;SGB=67.3108;VDB=0.58783;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.10:8087046 chr10:008087046 0 W/8087046-8087046 FN929-S Single Base Substitution A-C INTERGENIC HOMO SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN1113-S.SNP.10:8106418 chr10:008106418 0 W/8106418-8106418 FN1113-S Single Base Substitution A-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN-175.SNP.10:8107673 chr10:008107673 0 W/8107673-8107673 FN-175 Single Base Substitution C-T INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2595-S.SNP.10:8126289 chr10:008126289 0 W/8126289-8126289 FN2595-S SNP C -> A AC=1;AN=188;BQB=0.0080833;DP=2872;DP4=1563,670,77,22;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0372563;MQB=3.56206e-26;MQSB=1.04454e-10;RPB=7.79444e-06;SGB=-1151.92;VDB=0.999978;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.10:8128051 chr10:008128051 0 W/8128051-8128051 FN1485-S Single Base Substitution A-G INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2597-S.SNP.10:8129802 chr10:008129802 0 W/8129802-8129802 FN2597-S SNP C -> T AC=1;AN=188;BQB=0.0648154;DP=6932;DP4=2022,3959,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.15277;MQB=0.264803;MQSB=0;RPB=0.324467;SGB=-37.0454;VDB=0.820677;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.10:8135256 chr10:008135256 0 W/8135256-8135256 FN3524-S SNP C -> G AC=1;AN=188;BQB=0.958035;DP=3261;DP4=885,2185,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.339773;MQB=0.237433;MQSB=5.01078e-15;RPB=0.503248;SGB=36.2493;VDB=0.71227;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.10:8142093 chr10:008142093 0 W/8142093-8142093 FN428-S Single Base Substitution C-A INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1455-S.SNP.10:8143135 chr10:008143135 0 W/8143135-8143135 FN1455-S Single Base Substitution G-T INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3388-S.SNP.10:8145040 chr10:008145040 0 W/8145040-8145040 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.857064;DP=6600;DP4=3330,3109,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.114091;MQB=0.0101133;MQSB=0;RPB=0.299363;SGB=93.9603;VDB=0.00751993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:8153323 chr10:008153323 0 W/8153323-8153323 FN2083-S SNP C -> A AC=1;AN=168;BQB=8.51693e-06;DP=7183;DP4=3107,3390,354,37;HOB=7.08617e-05;ICB=0.000142567;MQ=19;MQ0F=0.0439928;MQB=1.4013e-45;MQSB=0;RPB=0.562374;SGB=-4828.23;VDB=0.92771;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.10:8159402 chr10:008159402 0 W/8159402-8159402 FN2649-S SNP T -> C AC=1;AN=200;BQB=1.75871e-08;DP=8810;DP4=2304,5730,21,46;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.302384;MQB=0.700892;MQSB=0.32826;RPB=0.177538;SGB=-1845.06;VDB=0.002183;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.10:8159500 chr10:008159500 0 W/8159500-8159500 FN497-S Single Base Substitution A-G INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN2542-S.SNP.10:8160320 chr10:008160320 0 W/8160320-8160320 FN2542-S SNP T -> G AC=1;AN=190;BQB=0.408797;DP=7409;DP4=4892,1936,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.155757;MQB=0.0321127;MQSB=0;RPB=0.641488;SGB=-35.8307;VDB=0.0206685;EFF=INTERGENIC(MODIFIER||||||||||1) FN1061-S.SNP.10:8212879 chr10:008212879 0 W/8212879-8212879 FN1061-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3666-S.SNP.10:8216686 chr10:008216686 0 W/8216686-8216686 FN3666-S SNP C -> A AC=1;AN=190;BQB=0.970058;DP=3285;DP4=2262,792,15,5;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.205175;MQB=0.939475;MQSB=0;RPB=0.439426;SGB=36.4291;VDB=0.82589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.10:8216687 chr10:008216687 0 W/8216687-8216687 FN3666-S SNP T -> G AC=1;AN=190;BQB=0.992535;DP=3294;DP4=2299,793,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.204311;MQB=0.963456;MQSB=0;RPB=0.371715;SGB=53.8699;VDB=0.890212;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.10:8225787 chr10:008225787 0 W/8225787-8225787 FN760-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g16490 retrotransposon protein, putative, unclassified, expressed SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2705-S.SNP.10:8227467 chr10:008227467 0 W/8227467-8227467 FN2705-S SNP T -> G AC=2;AN=200;BQB=0.850329;DP=5035;DP4=2617,2160,8,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15622e-11;MQSB=0.560507;RPB=0.917827;SGB=12.7003;VDB=0.976771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.10:8228602 chr10:008228602 0 W/8228602-8228602 FN-121 Single Base Substitution T-G INTERGENIC HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN230-S.SNP.10:8230938 chr10:008230938 0 W/8230938-8230938 FN230-S Single Base Substitution C-T INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN1758-S.SNP.10:8236445 chr10:008236445 0 W/8236445-8236445 FN1758-S SNP T -> C AC=1;AN=188;BQB=0.513675;DP=2383;DP4=1099,1251,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0121695;MQB=0.0286858;MQSB=9.88855e-39;RPB=0.231774;SGB=-35.081;VDB=0.402837;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C260|538|LOC_Os10g16520|protein_coding|CODING|LOC_Os10g16520.1|2|1) FN2698-S.SNP.10:8250356 chr10:008250356 0 W/8250356-8250356 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.0981593;DP=5316;DP4=2256,2716,6,5;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0425132;MQB=0.19823;MQSB=4.2925e-09;RPB=0.64568;SGB=13.8539;VDB=0.659762;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F441|987|LOC_Os10g16550|protein_coding|CODING|LOC_Os10g16550.1|3|1) FN2651-S.SNP.10:8263635 chr10:008263635 0 W/8263635-8263635 FN2651-S SNP A -> G AC=1;AN=200;BQB=0.982403;DP=3684;DP4=1542,1919,9,11;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0773616;MQB=0.74548;MQSB=1.50107e-41;RPB=0.921973;SGB=61.9006;VDB=0.973134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.10:8265033 chr10:008265033 0 W/8265033-8265033 FN2625-S SNP T -> C AC=2;AN=200;BQB=0.560982;DP=4353;DP4=1938,2181,20,18;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0530668;MQB=3.21939e-05;MQSB=1.5647e-29;RPB=0.9743;SGB=169.394;VDB=0.363547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.10:8265046 chr10:008265046 0 W/8265046-8265046 FN2625-S SNP T -> C AC=2;AN=200;BQB=0.546831;DP=4307;DP4=1922,2164,19,20;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.0359879;MQB=2.07377e-07;MQSB=8.93468e-21;RPB=0.958053;SGB=130.399;VDB=0.373326;EFF=INTERGENIC(MODIFIER||||||||||1) FN876-S.SNP.10:8266992 chr10:008266992 0 W/8266992-8266992 FN876-S Single Base Substitution T-A INTERGENIC HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. W674-4-1.SNP.10:8269369 chr10:008269369 0 W/8269369-8269369 W674-4-1 Single Base Substitution T-C INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN589-S.SNP.10:8269861 chr10:008269861 0 W/8269861-8269861 FN589-S Single Base Substitution G-T INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3529-S.SNP.10:8269920 chr10:008269920 0 W/8269920-8269920 FN3529-S SNP A -> T AC=1;AN=188;BQB=0.947294;DP=2686;DP4=1336,1217,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.08394e-06;MQSB=0.99126;RPB=0.590323;SGB=35.3493;VDB=0.0276294;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.10:8271200 chr10:008271200 0 W/8271200-8271200 FN514-S Single Base Substitution C-T INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1096-S.SNP.10:8276836 chr10:008276836 0 W/8276836-8276836 FN1096-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g16600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN3450-S.SNP.10:8289520 chr10:008289520 0 W/8289520-8289520 FN3450-S SNP A -> G AC=1;AN=184;BQB=0.972448;DP=2743;DP4=1082,1587,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31896e-05;MQSB=0.992915;RPB=0.549018;SGB=30.6558;VDB=0.212008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.10:8291484 chr10:008291484 0 W/8291484-8291484 FN1405-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g16630 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2411.SNP.10:8293284 chr10:008293284 0 W/8293284-8293284 FN2411 SNP G -> A AC=1;AN=200;BQB=0.660414;DP=4677;DP4=2244,2023,22,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43256e-17;MQSB=0.971792;RPB=0.94586;SGB=39.9882;VDB=0.955562;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.10:8294518 chr10:008294518 0 W/8294518-8294518 FN3448-S SNP A -> C AC=1;AN=184;BQB=0.259058;DP=2755;DP4=1228,1445,2,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0544e-05;MQSB=0.988214;RPB=0.664409;SGB=15.7097;VDB=0.672201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1536-S.SNP.10:8297950 chr10:008297950 0 W/8297950-8297950 FN1536-S Single Base Substitution A-C INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN419-S.SNP.10:8303629 chr10:008303629 0 W/8303629-8303629 FN419-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g16640 expressed protein SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN909-S.SNP.10:8309036 chr10:008309036 0 W/8309036-8309036 FN909-S Single Base Substitution G-C INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN449-S.SNP.10:8309120 chr10:008309120 0 W/8309120-8309120 FN449-S Single Base Substitution T-A INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN497-S.SNP.10:8311094 chr10:008311094 0 W/8311094-8311094 FN497-S Single Base Substitution T-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3606-S.SNP.10:8311528 chr10:008311528 0 W/8311528-8311528 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.921623;DP=2196;DP4=1327,790,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0136612;MQB=0.291098;MQSB=4.4616e-10;RPB=0.269173;SGB=26.3271;VDB=0.0119151;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.10:8312635 chr10:008312635 0 W/8312635-8312635 FN2242-S SNP C -> A AC=1;AN=190;BQB=0.995714;DP=4743;DP4=1795,2452,15,24;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0219271;MQB=0.193362;MQSB=1.62184e-22;RPB=0.994866;SGB=128.501;VDB=0.168853;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.10:8321549 chr10:008321549 0 W/8321549-8321549 FN-194 Single Base Substitution T-A INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN956-S.SNP.10:8324147 chr10:008324147 0 W/8324147-8324147 FN956-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g16700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2119-S.SNP.10:8325010 chr10:008325010 0 W/8325010-8325010 FN2119-S SNP A -> T AC=1;AN=168;BQB=0.14971;DP=2940;DP4=1322,1538,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=34;MQ0F=0.0969388;MQB=0.97156;MQSB=0;RPB=0.86149;SGB=-14.9417;VDB=0.788341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.10:8325766 chr10:008325766 0 W/8325766-8325766 FN3843-S SNP G -> T AC=1;AN=190;BQB=0.845747;DP=3889;DP4=2210,1565,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.127282;MQB=0.899034;MQSB=6.46055e-41;RPB=0.212435;SGB=53.8699;VDB=0.634427;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.10:8330765 chr10:008330765 0 W/8330765-8330765 FN-93 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g16720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3768-S.SNP.10:8332065 chr10:008332065 0 W/8332065-8332065 FN3768-S SNP G -> T AC=1;AN=190;BQB=0.892386;DP=3779;DP4=1820,1827,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.331569;MQB=0.00764849;MQSB=0;RPB=0.716536;SGB=62.7569;VDB=0.940861;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S939|1714|LOC_Os10g16720|protein_coding|CODING|LOC_Os10g16720.1|3|1) FN4202-S.SNP.10:8334627 chr10:008334627 0 W/8334627-8334627 FN4202-S SNP A -> G AC=1;AN=170;BQB=0.956167;DP=3547;DP4=1419,1948,25,21;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0544122;MQB=0.349897;MQSB=5.91775e-05;RPB=0.935269;SGB=47.612;VDB=0.47845;EFF=INTRON(MODIFIER||||1714|LOC_Os10g16720|protein_coding|CODING|LOC_Os10g16720.1|1|1) FN2094-S.SNP.10:8346402 chr10:008346402 0 W/8346402-8346402 FN2094-S SNP T -> C AC=2;AN=168;BQB=0.923874;DP=2560;DP4=1253,1213,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87434e-14;MQSB=0.987813;RPB=0.579524;SGB=-46.9043;VDB=0.640794;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T27A|1326|LOC_Os10g16750|protein_coding|CODING|LOC_Os10g16750.1|1|1) FN620-S.SNP.10:8347260 chr10:008347260 0 W/8347260-8347260 FN620-S Single Base Substitution C-T INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN-179.SNP.10:8349602 chr10:008349602 0 W/8349602-8349602 FN-179 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-216.SNP.10:8351051 chr10:008351051 0 W/8351051-8351051 FN-216 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g16760 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3946-S.SNP.10:8352793 chr10:008352793 0 W/8352793-8352793 FN3946-S SNP C -> T AC=1;AN=168;BQB=0.981168;DP=2804;DP4=1488,1167,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=22;MQ0F=0.255349;MQB=0.885121;MQSB=7.14602e-29;RPB=0.648258;SGB=-14.5109;VDB=0.348672;EFF=INTERGENIC(MODIFIER||||||||||1) FN408-S.SNP.10:8353395 chr10:008353395 0 W/8353395-8353395 FN408-S Single Base Substitution C-G INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2403.SNP.10:8361393 chr10:008361393 0 W/8361393-8361393 FN2403 SNP G -> T AC=1;AN=200;BQB=0.00843178;DP=3439;DP4=862,2230,2,86;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.132597;MQB=2.39331e-19;MQSB=0;RPB=0.973482;SGB=-1477.46;VDB=1.38863e-23;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.10:8372521 chr10:008372521 0 W/8372521-8372521 FN1039-S Single Base Substitution C-T INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2618-S.SNP.10:8376376 chr10:008376376 0 W/8376376-8376376 FN2618-S SNP C -> T AC=1;AN=198;BQB=0.749485;DP=4198;DP4=2049,1905,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.43943e-12;MQSB=0.917002;RPB=0.993309;SGB=-38.26;VDB=0.994313;EFF=INTRON(MODIFIER||||407|LOC_Os10g16810|protein_coding|CODING|LOC_Os10g16810.1|2|1) FN1268-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN1268-S Single Base Substitution C-G INTRON HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2112-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN2112-S SNP C -> G AC=1;AN=168;BQB=0.100176;DP=3052;DP4=1715,1308,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.68729e-06;MQSB=0.976752;RPB=0.614061;SGB=4.1907;VDB=0.881906;EFF=INTRON(MODIFIER||||407|LOC_Os10g16810|protein_coding|CODING|LOC_Os10g16810.1|1|1) FN3531-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN3531-S SNP C -> G AC=2;AN=188;BQB=0.939015;DP=2983;DP4=1571,1339,11,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.33591e-11;MQSB=0.941458;RPB=0.596806;SGB=71.6954;VDB=0.196638;EFF=INTRON(MODIFIER||||407|LOC_Os10g16810|protein_coding|CODING|LOC_Os10g16810.1|1|1) FN4312-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN4312-S SNP C -> G AC=2;AN=170;BQB=0.993143;DP=2404;DP4=1259,1062,17,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.29997e-17;MQSB=0.994733;RPB=0.721439;SGB=123.397;VDB=0.606061;EFF=INTRON(MODIFIER||||407|LOC_Os10g16810|protein_coding|CODING|LOC_Os10g16810.1|1|1) FN524-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN524-S Single Base Substitution C-G INTRON HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN828-S.SNP.10:8377240 chr10:008377240 0 W/8377240-8377240 FN828-S Single Base Substitution C-G INTRON HET SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3293-S.SNP.10:8383658 chr10:008383658 0 W/8383658-8383658 FN3293-S SNP T -> A AC=1;AN=184;BQB=0.929634;DP=3232;DP4=1663,1419,18,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00556931;MQB=3.08081e-11;MQSB=0.996168;RPB=0.575494;SGB=-10.5397;VDB=0.607321;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N345I|635|LOC_Os10g16824|protein_coding|CODING|LOC_Os10g16824.1|3|1) FN874-S.SNP.10:8384702 chr10:008384702 0 W/8384702-8384702 FN874-S Single Base Substitution G-C INTRON HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN4095-S.SNP.10:8385499 chr10:008385499 0 W/8385499-8385499 FN4095-S SNP G -> C AC=1;AN=182;BQB=0.998751;DP=3019;DP4=1416,1536,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.2427e-07;MQSB=0.805637;RPB=0.924659;SGB=53.1331;VDB=0.217085;EFF=INTRON(MODIFIER||||635|LOC_Os10g16824|protein_coding|CODING|LOC_Os10g16824.1|1|1) FN2465.SNP.10:8387132 chr10:008387132 0 W/8387132-8387132 FN2465 SNP A -> C AC=1;AN=200;BQB=0.954748;DP=4832;DP4=1904,2607,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.34718e-17;MQSB=0.82874;RPB=0.432608;SGB=105.163;VDB=0.534683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.10:8388355 chr10:008388355 0 W/8388355-8388355 FN1443-S Single Base Substitution T-A INTRON HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1102-S.SNP.10:8388473 chr10:008388473 0 W/8388473-8388473 FN1102-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os10g16840 transposon protein, putative, CACTA, En/Spm sub-class SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1195-S.SNP.10:8390090 chr10:008390090 0 W/8390090-8390090 FN1195-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN759-S.SNP.10:8391417 chr10:008391417 0 W/8391417-8391417 FN759-S Single Base Substitution G-A INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN2275-S.SNP.10:8391705 chr10:008391705 0 W/8391705-8391705 FN2275-S SNP A -> T AC=1;AN=190;BQB=0.970495;DP=3997;DP4=1764,1464,27,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78945e-21;MQSB=0.00250726;RPB=0.889295;SGB=55.389;VDB=0.505265;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.10:8392024 chr10:008392024 0 W/8392024-8392024 FN3740-S SNP G -> A AC=1;AN=190;BQB=0.83849;DP=2382;DP4=1150,1136,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.59293e-05;MQSB=0.988822;RPB=0.942012;SGB=44.5415;VDB=0.88678;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T96|997|LOC_Os10g16850|protein_coding|CODING|LOC_Os10g16850.1|1|1) FN2469.SNP.10:8393342 chr10:008393342 0 W/8393342-8393342 FN2469 SNP C -> T AC=1;AN=200;BQB=0.48118;DP=3687;DP4=1718,1664,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52625e-05;MQSB=0.391097;RPB=0.753979;SGB=31.2392;VDB=0.378188;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R536C|997|LOC_Os10g16850|protein_coding|CODING|LOC_Os10g16850.1|1|1) FN768-S.SNP.10:8398322 chr10:008398322 0 W/8398322-8398322 FN768-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g16860 retrotransposon protein, putative, unclassified, expressed SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN3928-S.SNP.10:8398424 chr10:008398424 0 W/8398424-8398424 FN3928-S SNP G -> A AC=1;AN=158;BQB=0.83889;DP=2439;DP4=1219,1127,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000410004;MQB=2.3388e-05;MQSB=0.968795;RPB=0.211837;SGB=50.9207;VDB=0.0673141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R989C|1963|LOC_Os10g16860|protein_coding|CODING|LOC_Os10g16860.1|2|1) FN4143-S.SNP.10:8400196 chr10:008400196 0 W/8400196-8400196 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.998707;DP=2207;DP4=1097,1049,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0185773;MQB=0.0156753;MQSB=0.794418;RPB=0.194932;SGB=47.8722;VDB=0.629855;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R422Q|1963|LOC_Os10g16860|protein_coding|CODING|LOC_Os10g16860.1|1|1) FN1369-S.SNP.10:8401433 chr10:008401433 0 W/8401433-8401433 FN1369-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os10g16860 retrotransposon protein, putative, unclassified, expressed SNo: 1158, Mutant_ID: FN1369-S, Generation: M2, Mutations: 83, Genes: 24, Seed availability: Yes. FN2348.SNP.10:8404215 chr10:008404215 0 W/8404215-8404215 FN2348 SNP T -> C AC=1;AN=192;BQB=0.449136;DP=4791;DP4=2127,2336,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.91142e-09;MQSB=0.997443;RPB=0.282192;SGB=39.78;VDB=0.138691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.10:8408472 chr10:008408472 0 W/8408472-8408472 FN1195-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN4082-S.SNP.10:8408790 chr10:008408790 0 W/8408790-8408790 FN4082-S SNP G -> T AC=1;AN=182;BQB=0.983548;DP=3182;DP4=1495,1602,6,12;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0650534;MQB=0.00442139;MQSB=0.728857;RPB=0.777685;SGB=75.6874;VDB=0.903988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A888S|1204|LOC_Os10g16870|protein_coding|CODING|LOC_Os10g16870.1|2|1) FN2687-S.SNP.10:8411033 chr10:008411033 0 W/8411033-8411033 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.830728;DP=4680;DP4=2666,1751,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05138e-06;MQSB=0.566325;RPB=0.992848;SGB=-16.7412;VDB=0.985024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.10:8411526 chr10:008411526 0 W/8411526-8411526 FN1650-S Single Base Substitution G-T INTERGENIC HET SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2782-S.SNP.10:8412596 chr10:008412596 0 W/8412596-8412596 FN2782-S SNP G -> A AC=1;AN=188;BQB=0.246367;DP=3295;DP4=1675,1365,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.58216e-10;MQSB=0.907905;RPB=0.998272;SGB=15.7299;VDB=0.00485913;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A180T|1476|LOC_Os10g16880|protein_coding|CODING|LOC_Os10g16880.1|1|1) FN1319-S.SNP.10:8420119 chr10:008420119 0 W/8420119-8420119 FN1319-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN4037-S.SNP.10:8420573 chr10:008420573 0 W/8420573-8420573 FN4037-S SNP C -> G AC=1;AN=168;BQB=0.758321;DP=2471;DP4=1195,1185,13,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.65776e-10;MQSB=0.960167;RPB=0.8053;SGB=45.0404;VDB=0.0874373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.10:8424991 chr10:008424991 0 W/8424991-8424991 FN2379 SNP G -> A AC=2;AN=192;BQB=0.232841;DP=5166;DP4=2604,2196,44,38;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000193573;MQB=1.4013e-45;MQSB=0.939814;RPB=0.852127;SGB=226.497;VDB=0.84367;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.10:8428293 chr10:008428293 0 W/8428293-8428293 FN449-S Single Base Substitution A-G INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1440-S.SNP.10:8431463 chr10:008431463 0 W/8431463-8431463 FN1440-S Single Base Substitution C-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN3115-S.SNP.10:8435811 chr10:008435811 0 W/8435811-8435811 FN3115-S SNP G -> C AC=1;AN=184;BQB=0.85698;DP=3668;DP4=1504,2083,12,15;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.220556;MQB=0.401617;MQSB=1.2891e-24;RPB=0.103906;SGB=-9.49613;VDB=0.203402;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L1444|1773|LOC_Os10g16900|protein_coding|CODING|LOC_Os10g16900.1|3|1) FN1550-S.SNP.10:8438413 chr10:008438413 0 W/8438413-8438413 FN1550-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g16900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1675-S.SNP.10:8441129 chr10:008441129 0 W/8441129-8441129 FN1675-S SNP C -> G AC=1;AN=188;BQB=0.0716689;DP=3221;DP4=1217,1971,2,18;HOB=5.65867e-05;ICB=0.000113775;MQ=14;MQ0F=0.548898;MQB=0.00206343;MQSB=0;RPB=0.00138476;SGB=-12.8266;VDB=0.366085;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.10:8461801 chr10:008461801 0 W/8461801-8461801 FN1200-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN850-S.SNP.10:8463411 chr10:008463411 0 W/8463411-8463411 FN850-S Single Base Substitution T-A INTRON HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN1740-S.SNP.10:8468168 chr10:008468168 0 W/8468168-8468168 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.702991;DP=3231;DP4=1555,1643,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.7478e-12;MQSB=0.969124;RPB=0.869497;SGB=76.2387;VDB=0.823967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.10:8468958 chr10:008468958 0 W/8468958-8468958 FN2121-S SNP C -> G AC=1;AN=166;BQB=0.967189;DP=3153;DP4=1294,1800,6,15;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=3.90033e-12;MQSB=0.769641;RPB=0.555191;SGB=36.7696;VDB=0.696604;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.10:8471213 chr10:008471213 0 W/8471213-8471213 FN3551-S SNP G -> T AC=1;AN=188;BQB=0.900747;DP=2868;DP4=1313,1501,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68243e-07;MQSB=0.99983;RPB=0.887755;SGB=28.8977;VDB=0.728489;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.10:8473326 chr10:008473326 0 W/8473326-8473326 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.627698;DP=2544;DP4=1195,1288,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.01314e-09;MQSB=0.959381;RPB=0.0781288;SGB=48.6486;VDB=0.77499;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.10:8473564 chr10:008473564 0 W/8473564-8473564 FN465-S Single Base Substitution C-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1763-S.SNP.10:8474631 chr10:008474631 0 W/8474631-8474631 FN1763-S SNP C -> T AC=2;AN=188;BQB=0.398137;DP=3051;DP4=1463,1531,8,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.33647e-09;MQSB=0.929623;RPB=0.52626;SGB=-40.5615;VDB=0.645973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.10:8477129 chr10:008477129 0 W/8477129-8477129 FN2123-S SNP G -> A AC=1;AN=166;BQB=0.00576224;DP=3971;DP4=1736,2190,13,10;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=2.34059e-07;MQSB=0.999917;RPB=0.906881;SGB=14.2064;VDB=0.65184;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.10:8478413 chr10:008478413 0 W/8478413-8478413 FN3653-S SNP C -> T AC=1;AN=190;BQB=0.893195;DP=3141;DP4=1480,1560,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000669896;MQSB=0.965096;RPB=0.247804;SGB=26.3271;VDB=0.470666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.10:8485216 chr10:008485216 0 W/8485216-8485216 FN2286 SNP T -> A AC=1;AN=192;BQB=0.373154;DP=2839;DP4=1099,1475,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0373371;MQB=0.0276742;MQSB=0.00258295;RPB=0.412792;SGB=64.7304;VDB=0.650584;EFF=INTRON(MODIFIER||||1522|LOC_Os10g16950|protein_coding|CODING|LOC_Os10g16950.1|3|1) FN3519-S.SNP.10:8503191 chr10:008503191 0 W/8503191-8503191 FN3519-S SNP A -> C AC=1;AN=188;BQB=0.988308;DP=3438;DP4=1898,1460,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.06622e-08;MQSB=1;RPB=0.706866;SGB=32.441;VDB=0.737168;EFF=INTRON(MODIFIER||||535|LOC_Os10g16974|protein_coding|CODING|LOC_Os10g16974.1|1|1) FN2317.SNP.10:8504306 chr10:008504306 0 W/8504306-8504306 FN2317 SNP G -> A AC=2;AN=192;BQB=0.849514;DP=4940;DP4=2490,2105,20,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.37849e-16;MQSB=0.998458;RPB=0.907301;SGB=107.503;VDB=0.542228;EFF=UTR_3_PRIME(MODIFIER||373||535|LOC_Os10g16974|protein_coding|CODING|LOC_Os10g16974.1|2|1) FN3775-S.SNP.10:8504306 chr10:008504306 0 W/8504306-8504306 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.825304;DP=2750;DP4=1305,1312,6,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.80174e-09;MQSB=0.951366;RPB=0.780755;SGB=85.5263;VDB=0.767656;EFF=UTR_3_PRIME(MODIFIER||373||535|LOC_Os10g16974|protein_coding|CODING|LOC_Os10g16974.1|2|1) FN838-S.SNP.10:8504306 chr10:008504306 0 W/8504306-8504306 FN838-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN2788-S.SNP.10:8505378 chr10:008505378 0 W/8505378-8505378 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.171045;DP=4131;DP4=1960,1901,18,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.03961e-11;MQSB=0.878891;RPB=0.610066;SGB=104.69;VDB=0.345018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.10:8505746 chr10:008505746 0 W/8505746-8505746 FN1566-S Single Base Substitution A-G INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN-291.SNP.10:8506506 chr10:008506506 0 W/8506506-8506506 FN-291 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g16990 expressed protein SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN2255-S.SNP.10:8513525 chr10:008513525 0 W/8513525-8513525 FN2255-S SNP G -> A AC=1;AN=190;BQB=0.961799;DP=5270;DP4=2581,2347,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05875e-13;MQSB=0.987934;RPB=0.714017;SGB=22.7576;VDB=0.412722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.10:8514752 chr10:008514752 0 W/8514752-8514752 FN2779-S SNP A -> G AC=1;AN=198;BQB=0.876615;DP=3711;DP4=1903,1588,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.05727e-07;MQSB=0.0251786;RPB=0.768429;SGB=39.7248;VDB=0.632763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.10:8516161 chr10:008516161 0 W/8516161-8516161 FN2232-S SNP T -> A AC=1;AN=190;BQB=0.293533;DP=5488;DP4=2383,2675,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83482e-13;MQSB=0.509793;RPB=0.994259;SGB=-10.4526;VDB=0.778732;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.10:8526510 chr10:008526510 0 W/8526510-8526510 FN838-S Single Base Substitution G-T INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN620-S.SNP.10:8526813 chr10:008526813 0 W/8526813-8526813 FN620-S Single Base Substitution T-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN_955-1.SNP.10:8529189 chr10:008529189 0 W/8529189-8529189 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3807-S.SNP.10:8536715 chr10:008536715 0 W/8536715-8536715 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.760357;DP=3318;DP4=1714,1484,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.15822e-11;MQSB=0.799937;RPB=0.983701;SGB=71.8647;VDB=0.984054;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A160|493|LOC_Os10g17040|protein_coding|CODING|LOC_Os10g17040.1|3|1) FN780-S.SNP.10:8537483 chr10:008537483 0 W/8537483-8537483 FN780-S Single Base Substitution A-G INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN550-S.SNP.10:8537507 chr10:008537507 0 W/8537507-8537507 FN550-S Single Base Substitution G-A INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN-163.SNP.10:8539512 chr10:008539512 0 W/8539512-8539512 FN-163 Single Base Substitution A-G INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN542-S.SNP.10:8541339 chr10:008541339 0 W/8541339-8541339 FN542-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g17050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2708-S.SNP.10:8545410 chr10:008545410 0 W/8545410-8545410 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.365918;DP=5430;DP4=2835,2320,8,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0331492;MQB=0.000252459;MQSB=6.38384e-12;RPB=0.639052;SGB=29.4849;VDB=0.504402;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S295|321|LOC_Os10g17060|protein_coding|CODING|LOC_Os10g17060.1|1|1) FN3580-S.SNP.10:8548063 chr10:008548063 0 W/8548063-8548063 FN3580-S SNP C -> T AC=1;AN=188;BQB=0.5276;DP=3432;DP4=1701,1658,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=27;MQ0F=0.301573;MQB=0.833556;MQSB=0;RPB=0.686273;SGB=62.6088;VDB=0.901434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.10:8548769 chr10:008548769 0 W/8548769-8548769 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.419261;DP=1109;DP4=436,637,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.0883679;MQB=0.683837;MQSB=0.362255;RPB=0.804676;SGB=18.2682;VDB=0.72462;EFF=INTERGENIC(MODIFIER||||||||||1) FN1216-S.SNP.10:8550247 chr10:008550247 0 W/8550247-8550247 FN1216-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g17070 retrotransposon protein, putative, unclassified, expressed SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN3810-S.SNP.10:8550580 chr10:008550580 0 W/8550580-8550580 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.937833;DP=3055;DP4=1434,1525,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.20078e-09;MQSB=0.981874;RPB=0.0280927;SGB=58.2031;VDB=0.0759712;EFF=INTRON(MODIFIER||||392|LOC_Os10g17070|protein_coding|CODING|LOC_Os10g17070.1|5|1) FN3666-S.SNP.10:8552188 chr10:008552188 0 W/8552188-8552188 FN3666-S SNP A -> T AC=1;AN=190;BQB=0.998836;DP=2932;DP4=1404,1355,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23304e-08;MQSB=0.952184;RPB=0.995338;SGB=71.8647;VDB=0.155244;EFF=INTRON(MODIFIER||||392|LOC_Os10g17070|protein_coding|CODING|LOC_Os10g17070.1|2|1) 707-1.SNP.10:8569850 chr10:008569850 0 W/8569850-8569850 707-1 Single Base Substitution C-A INTERGENIC HET SNo: 1469, Mutant_ID: 707-1, Generation: M2, Mutations: 41, Genes: 34, Seed availability: Yes. 707-2.SNP.10:8569850 chr10:008569850 0 W/8569850-8569850 707-2 Single Base Substitution C-A INTERGENIC Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. 707-4.SNP.10:8569850 chr10:008569850 0 W/8569850-8569850 707-4 Single Base Substitution C-A INTERGENIC Homo SNo: 1472, Mutant_ID: 707-4, Generation: M2, Mutations: 33, Genes: 30, Seed availability: Yes. 707-6.SNP.10:8569850 chr10:008569850 0 W/8569850-8569850 707-6 Single Base Substitution C-A INTERGENIC HET SNo: 1474, Mutant_ID: 707-6, Generation: M2, Mutations: 28, Genes: 26, Seed availability: Yes. 707-7.SNP.10:8569850 chr10:008569850 0 W/8569850-8569850 707-7 Single Base Substitution C-A INTERGENIC HET SNo: 1475, Mutant_ID: 707-7, Generation: M2, Mutations: 32, Genes: 17, Seed availability: Yes. FN4088-S.SNP.10:8596919 chr10:008596919 0 W/8596919-8596919 FN4088-S SNP C -> T AC=1;AN=182;BQB=0.262595;DP=2977;DP4=1571,1254,5,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.24694e-06;MQSB=0.911127;RPB=0.40559;SGB=-15.3558;VDB=0.620972;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.10:8599076 chr10:008599076 0 W/8599076-8599076 FN3427-S SNP G -> A AC=1;AN=184;BQB=0.995993;DP=2781;DP4=1198,1500,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.32176e-07;MQSB=0.344774;RPB=0.918281;SGB=13.188;VDB=0.282858;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.10:8600367 chr10:008600367 0 W/8600367-8600367 FN1606-S Single Base Substitution G-C INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN-78.SNP.10:8601386 chr10:008601386 0 W/8601386-8601386 FN-78 Single Base Substitution C-T INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1056-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN1056-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN1173-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN1173-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1236-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN1236-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN3362-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN3362-S SNP C -> T AC=2;AN=184;BQB=0.821428;DP=3092;DP4=1560,1413,20,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.0548e-16;MQSB=0.999379;RPB=0.44735;SGB=139.178;VDB=0.272106;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C118|320|LOC_Os10g17140|protein_coding|CODING|LOC_Os10g17140.1|1|1) FN406-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN406-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN445-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN445-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN722-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN722-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN808-S.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 FN808-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. W278-3-1.SNP.10:8605251 chr10:008605251 0 W/8605251-8605251 W278-3-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN520-S.SNP.10:8606121 chr10:008606121 0 W/8606121-8606121 FN520-S Single Base Substitution T-G INTERGENIC HET SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN4272-S.SNP.10:8617805 chr10:008617805 0 W/8617805-8617805 FN4272-S SNP C -> T AC=1;AN=170;BQB=0.999413;DP=2599;DP4=1437,1094,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0954213;MQB=0.997595;MQSB=1.96881e-33;RPB=0.50635;SGB=45.206;VDB=0.448638;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.10:8620140 chr10:008620140 0 W/8620140-8620140 FN670-S Single Base Substitution G-T INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2531-S.SNP.10:8620937 chr10:008620937 0 W/8620937-8620937 FN2531-S SNP C -> A AC=1;AN=186;BQB=0.996389;DP=3432;DP4=1669,1494,11,9;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.06702e-09;MQSB=0.885759;RPB=0.258718;SGB=61.7198;VDB=0.59346;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.10:8621869 chr10:008621869 0 W/8621869-8621869 FN-184 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g17170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3668-S.SNP.10:8622148 chr10:008622148 0 W/8622148-8622148 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.954712;DP=2962;DP4=1442,1395,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0168805;MQB=0.0173845;MQSB=0.0888865;RPB=0.993161;SGB=39.9877;VDB=0.982084;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y1459C|1577|LOC_Os10g17170|protein_coding|CODING|LOC_Os10g17170.1|4|1) FN2374.SNP.10:8622663 chr10:008622663 0 W/8622663-8622663 FN2374 SNP C -> T AC=2;AN=192;BQB=0.495775;DP=4854;DP4=2144,2471,14,20;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.0181294;MQB=2.59796e-05;MQSB=0.00151685;RPB=0.977193;SGB=72.5078;VDB=0.260446;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1287|1577|LOC_Os10g17170|protein_coding|CODING|LOC_Os10g17170.1|4|1) FN930-S.SNP.10:8625262 chr10:008625262 0 W/8625262-8625262 FN930-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g17170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1084-S.SNP.10:8628726 chr10:008628726 0 W/8628726-8628726 FN1084-S Single Base Substitution A-T INTERGENIC HOMO SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1406-S.SNP.10:8631097 chr10:008631097 0 W/8631097-8631097 FN1406-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os10g17180 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3852-S.SNP.10:8631515 chr10:008631515 0 W/8631515-8631515 FN3852-S SNP G -> A AC=1;AN=158;BQB=0.267393;DP=2109;DP4=768,1240,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00875508;MQSB=0.105336;RPB=0.965859;SGB=33.9591;VDB=0.382586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.10:8633438 chr10:008633438 0 W/8633438-8633438 FN1473-S Single Base Substitution T-G INTERGENIC HET SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2558-S.SNP.10:8635061 chr10:008635061 0 W/8635061-8635061 FN2558-S SNP C -> T AC=1;AN=192;BQB=0.999868;DP=3886;DP4=1961,1750,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000257334;MQB=2.52895e-09;MQSB=0.985563;RPB=0.971036;SGB=72.5245;VDB=0.719323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.10:8635110 chr10:008635110 0 W/8635110-8635110 FN1732-S SNP C -> A AC=1;AN=188;BQB=0.913072;DP=4023;DP4=2085,1901,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00372856;MQB=4.75293e-10;MQSB=0.985644;RPB=0.976866;SGB=38.7926;VDB=0.268713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.10:8637171 chr10:008637171 0 W/8637171-8637171 FN2386 SNP G -> A AC=1;AN=192;BQB=0.998661;DP=4441;DP4=2072,2122,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.45638e-09;MQSB=0.760362;RPB=0.416212;SGB=54.0374;VDB=0.828558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.10:8639287 chr10:008639287 0 W/8639287-8639287 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.929948;DP=2350;DP4=1015,1255,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.64041e-07;MQSB=0.65717;RPB=0.777499;SGB=27.3346;VDB=0.292426;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.10:8642658 chr10:008642658 0 W/8642658-8642658 FN2789-S SNP G -> A AC=1;AN=186;BQB=0.290128;DP=3890;DP4=1799,1862,6,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.78241e-06;MQSB=0.945608;RPB=0.985917;SGB=18.9639;VDB=0.649234;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.10:8651446 chr10:008651446 0 W/8651446-8651446 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3749-S.SNP.10:8658139 chr10:008658139 0 W/8658139-8658139 FN3749-S SNP C -> A AC=1;AN=190;BQB=0.434448;DP=2920;DP4=1372,1439,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88205e-09;MQSB=0.950275;RPB=0.692465;SGB=31.3213;VDB=0.921811;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.10:8661493 chr10:008661493 0 W/8661493-8661493 FN904-S Single Base Substitution A-G INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN1424-S.SNP.10:8668883 chr10:008668883 0 W/8668883-8668883 FN1424-S Single Base Substitution A-C INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3571-S.SNP.10:8677928 chr10:008677928 0 W/8677928-8677928 FN3571-S SNP G -> A AC=1;AN=188;BQB=0.77368;DP=4139;DP4=1581,2455,14,26;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.175646;MQB=0.510317;MQSB=0;RPB=0.809282;SGB=-46.4986;VDB=0.973552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P51L|1945|LOC_Os10g17250|protein_coding|CODING|LOC_Os10g17250.1|1|1) FN483-S.SNP.10:8690121 chr10:008690121 0 W/8690121-8690121 FN483-S Single Base Substitution C-T INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2618-S.SNP.10:8697830 chr10:008697830 0 W/8697830-8697830 FN2618-S SNP C -> G AC=1;AN=198;BQB=0.180182;DP=4107;DP4=2158,1755,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.80451e-13;MQSB=0.950574;RPB=0.555621;SGB=127.666;VDB=0.60544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.10:8702557 chr10:008702557 0 W/8702557-8702557 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.350227;DP=4717;DP4=2179,2267,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32862e-17;MQSB=0.819268;RPB=0.994461;SGB=28.752;VDB=0.832727;EFF=SPLICE_SITE_REGION(LOW||||823|LOC_Os10g17300|protein_coding|CODING|LOC_Os10g17300.1|1|1),INTRON(MODIFIER||||823|LOC_Os10g17300|protein_coding|CODING|LOC_Os10g17300.1|1|1) FN2183-S.SNP.10:8705394 chr10:008705394 0 W/8705394-8705394 FN2183-S SNP C -> A AC=1;AN=190;BQB=0.900753;DP=5252;DP4=2549,2397,25,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8088e-24;MQSB=0.999684;RPB=0.999856;SGB=149.825;VDB=0.979528;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L747I|823|LOC_Os10g17300|protein_coding|CODING|LOC_Os10g17300.1|10|1) FN3508-S.SNP.10:8705728 chr10:008705728 0 W/8705728-8705728 FN3508-S SNP A -> G AC=1;AN=188;BQB=0.937618;DP=2856;DP4=1307,1466,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.7311e-06;MQSB=0.925595;RPB=0.90783;SGB=21.8113;VDB=0.219792;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.10:8708446 chr10:008708446 0 W/8708446-8708446 FN229-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g17310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2306.SNP.10:8710310 chr10:008710310 0 W/8710310-8710310 FN2306 SNP C -> T AC=1;AN=192;BQB=0.572115;DP=5091;DP4=2751,2015,3,6;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.10548;MQB=0.941155;MQSB=5.46382e-11;RPB=0.779018;SGB=8.3993;VDB=0.603917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.10:8720006 chr10:008720006 0 W/8720006-8720006 FN3374-S SNP G -> A AC=1;AN=184;BQB=0.98332;DP=3264;DP4=1362,1783,20,9;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.566483;MQB=0.0245267;MQSB=0;RPB=0.303355;SGB=92.0965;VDB=0.812556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.10:8721360 chr10:008721360 0 W/8721360-8721360 FN2620-S SNP A -> G AC=1;AN=198;BQB=0.68698;DP=4226;DP4=2080,1891,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.66296e-12;MQSB=0.992435;RPB=0.782927;SGB=60.4858;VDB=0.225543;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F34|231|LOC_Os10g17330|protein_coding|CODING|LOC_Os10g17330.1|2|1) FN2731-S.SNP.10:8722552 chr10:008722552 0 W/8722552-8722552 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.729492;DP=5290;DP4=2473,2496,20,13;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.031569;MQB=0.455508;MQSB=0;RPB=0.54503;SGB=-79.233;VDB=0.36787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.10:8724088 chr10:008724088 0 W/8724088-8724088 FN2767-S SNP C -> T AC=1;AN=196;BQB=0.895044;DP=4417;DP4=1930,2268,22,12;HOB=5.20616e-05;ICB=0.000104654;MQ=15;MQ0F=0.501019;MQB=0.0246889;MQSB=0;RPB=0.514202;SGB=73.4614;VDB=0.711255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.10:8726525 chr10:008726525 0 W/8726525-8726525 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.753921;DP=6650;DP4=4085,1599,10,15;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.157594;MQB=6.98492e-05;MQSB=9.57119e-05;RPB=0.878795;SGB=50.3263;VDB=0.837113;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.10:8736002 chr10:008736002 0 W/8736002-8736002 FN2218-S SNP G -> C AC=1;AN=190;BQB=0.982993;DP=2504;DP4=746,1372,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00359425;MQB=0.00174985;MQSB=0.0310247;RPB=0.0879934;SGB=49.0954;VDB=0.242177;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.10:8747402 chr10:008747402 0 W/8747402-8747402 FN1456-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g17360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN-171.SNP.10:8770644 chr10:008770644 0 W/8770644-8770644 FN-171 Single Base Substitution A-G INTRON HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN-101.SNP.10:8771288 chr10:008771288 0 W/8771288-8771288 FN-101 Single Base Substitution G-A INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-184.SNP.10:8774742 chr10:008774742 0 W/8774742-8774742 FN-184 Single Base Substitution T-C INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2583-S.SNP.10:8802673 chr10:008802673 0 W/8802673-8802673 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.911982;DP=5132;DP4=2576,2319,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.46475e-11;MQSB=0.898047;RPB=0.941754;SGB=77.2904;VDB=0.0494711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.10:8804180 chr10:008804180 0 W/8804180-8804180 FN2123-S SNP C -> T AC=1;AN=168;BQB=0.876792;DP=3905;DP4=2133,1723,21,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.22535e-20;MQSB=0.93337;RPB=0.0267114;SGB=106.795;VDB=0.343188;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.10:8810413 chr10:008810413 0 W/8810413-8810413 FN2372 SNP C -> T AC=1;AN=192;BQB=0.704229;DP=4632;DP4=2158,2134,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91831e-12;MQSB=0.913349;RPB=0.866716;SGB=-6.30345;VDB=0.221038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.10:8812832 chr10:008812832 0 W/8812832-8812832 FN3416-S SNP A -> T AC=1;AN=184;BQB=0.0420846;DP=4020;DP4=2105,1714,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.60842e-06;MQSB=0.993269;RPB=0.995596;SGB=11.3677;VDB=0.371954;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.10:8818738 chr10:008818738 0 W/8818738-8818738 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.309672;DP=4357;DP4=1752,2364,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=32;MQ0F=0.058297;MQB=0.431324;MQSB=0;RPB=0.618614;SGB=8.77275;VDB=0.0654688;EFF=INTRON(MODIFIER||||485|LOC_Os10g17489|protein_coding|CODING|LOC_Os10g17489.1|1|1) FN4094-S.SNP.10:8825271 chr10:008825271 0 W/8825271-8825271 FN4094-S SNP A -> T AC=1;AN=182;BQB=0.980068;DP=2748;DP4=1359,1326,10,1;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.40318e-06;MQSB=0.0263176;RPB=0.919434;SGB=44.1115;VDB=0.27211;EFF=INTRON(MODIFIER||||485|LOC_Os10g17489|protein_coding|CODING|LOC_Os10g17489.1|1|1) FN433-S.SNP.10:8827244 chr10:008827244 0 W/8827244-8827244 FN433-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g17489 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN4037-S.SNP.10:8828280 chr10:008828280 0 W/8828280-8828280 FN4037-S SNP T -> C AC=1;AN=168;BQB=0.667266;DP=2715;DP4=1250,1331,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.16677e-05;MQSB=0.878597;RPB=0.906952;SGB=34.748;VDB=0.843506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.10:8838908 chr10:008838908 0 W/8838908-8838908 FN3699-S SNP G -> A AC=1;AN=190;BQB=0.720604;DP=2914;DP4=1540,1287,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000343171;MQB=3.98739e-09;MQSB=0.944308;RPB=0.989066;SGB=67.3108;VDB=0.742167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.10:8840176 chr10:008840176 0 W/8840176-8840176 FN3828-S SNP G -> T AC=1;AN=190;BQB=0.615065;DP=2286;DP4=1346,844,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000437445;MQB=2.02904e-05;MQSB=0.811335;RPB=0.945497;SGB=25.439;VDB=0.549935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.10:8847055 chr10:008847055 0 W/8847055-8847055 FN2223-S SNP G -> T AC=1;AN=190;BQB=0.99995;DP=3785;DP4=2039,1496,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09081e-07;MQSB=0.330393;RPB=0.747127;SGB=53.6492;VDB=0.297237;EFF=INTERGENIC(MODIFIER||||||||||1) FN4095-S.SNP.10:8864706 chr10:008864706 0 W/8864706-8864706 FN4095-S SNP A -> C AC=1;AN=182;BQB=0.840839;DP=3259;DP4=1416,1692,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.0444922;MQB=0.942262;MQSB=3.09418e-34;RPB=0.93395;SGB=71.1765;VDB=0.291595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y279S|934|LOC_Os10g17570|protein_coding|CODING|LOC_Os10g17570.1|2|1) FN2666-S.SNP.10:8867827 chr10:008867827 0 W/8867827-8867827 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.878134;DP=4646;DP4=2342,2046,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92558e-15;MQSB=0.981487;RPB=0.945574;SGB=52.9314;VDB=0.863276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.10:8883050 chr10:008883050 0 W/8883050-8883050 FN1423-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g17590 retrotransposon protein, putative, unclassified, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN4025-S.SNP.10:8895039 chr10:008895039 0 W/8895039-8895039 FN4025-S SNP G -> T AC=2;AN=168;BQB=0.999863;DP=2918;DP4=1497,1320,14,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.71057e-13;MQSB=0.919032;RPB=0.933276;SGB=75.9177;VDB=0.439892;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.10:8900083 chr10:008900083 0 W/8900083-8900083 FN756-S Single Base Substitution C-T INTRON HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2380.SNP.10:8900672 chr10:008900672 0 W/8900672-8900672 FN2380 SNP C -> T AC=1;AN=192;BQB=0.917187;DP=4784;DP4=2231,2168,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17468e-08;MQSB=0.968314;RPB=0.679604;SGB=54.0374;VDB=0.632406;EFF=INTRON(MODIFIER||||1367|LOC_Os10g17610|protein_coding|CODING|LOC_Os10g17610.1|8|1) FN2191-S.SNP.10:8901157 chr10:008901157 0 W/8901157-8901157 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.987801;DP=4368;DP4=2232,1753,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.45193e-08;MQSB=0.10734;RPB=0.279227;SGB=31.3213;VDB=0.201148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T1248I|1367|LOC_Os10g17610|protein_coding|CODING|LOC_Os10g17610.1|9|1) FN1300-S.SNP.10:8906351 chr10:008906351 0 W/8906351-8906351 FN1300-S Single Base Substitution C-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN-285.SNP.10:8909688 chr10:008909688 0 W/8909688-8909688 FN-285 Single Base Substitution C-T INTRON HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN391-S.SNP.10:8911839 chr10:008911839 0 W/8911839-8911839 FN391-S Single Base Substitution A-C INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2378.SNP.10:8913414 chr10:008913414 0 W/8913414-8913414 FN2378 SNP C -> A AC=1;AN=192;BQB=0.956522;DP=4338;DP4=1405,2280,11,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28914e-13;MQSB=0.493483;RPB=0.966105;SGB=-74.5504;VDB=0.169689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.10:8924128 chr10:008924128 0 W/8924128-8924128 FN2752-S SNP T -> C AC=1;AN=200;BQB=0.41055;DP=5023;DP4=2433,2367,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43296e-05;MQSB=0.94254;RPB=0.138201;SGB=31.2392;VDB=0.419626;EFF=INTRON(MODIFIER||||510|LOC_Os10g17650|protein_coding|CODING|LOC_Os10g17650.1|7|1) FN-103.SNP.10:8928867 chr10:008928867 0 W/8928867-8928867 FN-103 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN3562-S.SNP.10:8937440 chr10:008937440 0 W/8937440-8937440 FN3562-S SNP A -> G AC=1;AN=188;BQB=0.904481;DP=2868;DP4=1394,1363,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.53245e-09;MQSB=0.997092;RPB=0.962907;SGB=39.5276;VDB=0.891162;EFF=UTR_3_PRIME(MODIFIER||142||131|LOC_Os10g17680|protein_coding|CODING|LOC_Os10g17680.1|3|1) FN738-S.SNP.10:8939327 chr10:008939327 0 W/8939327-8939327 FN738-S Single Base Substitution G-C INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN3848-S.SNP.10:8944914 chr10:008944914 0 W/8944914-8944914 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.999905;DP=2424;DP4=1222,1123,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.71854e-06;MQSB=0.928841;RPB=0.947325;SGB=42.6978;VDB=0.12391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.10:8944938 chr10:008944938 0 W/8944938-8944938 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.0565218;DP=1743;DP4=513,1148,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000132305;MQSB=0.671827;RPB=0.301384;SGB=-16.665;VDB=0.32843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.10:8946499 chr10:008946499 0 W/8946499-8946499 FN2222-S SNP C -> T AC=1;AN=190;BQB=0.952004;DP=2806;DP4=1325,1191,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.47543e-08;MQSB=0.539936;RPB=0.698151;SGB=85.5263;VDB=0.849184;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G5D|131|LOC_Os10g17700|protein_coding|CODING|LOC_Os10g17700.1|1|1) FN598-S.SNP.10:8953453 chr10:008953453 0 W/8953453-8953453 FN598-S Single Base Substitution G-A INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2206-S.SNP.10:8958435 chr10:008958435 0 W/8958435-8958435 FN2206-S SNP C -> T AC=1;AN=190;BQB=0.00132595;DP=4813;DP4=1818,2521,9,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.58089e-08;MQSB=0.991039;RPB=0.95347;SGB=44.0907;VDB=0.278858;EFF=INTRON(MODIFIER||||913|LOC_Os10g17724|protein_coding|CODING|LOC_Os10g17724.1|1|1) FN979-S.SNP.10:8959640 chr10:008959640 0 W/8959640-8959640 FN979-S Single Base Substitution G-T INTRON HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2090-S.SNP.10:8959811 chr10:008959811 0 W/8959811-8959811 FN2090-S SNP G -> A AC=1;AN=168;BQB=0.972724;DP=2903;DP4=1386,1481,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00137788;MQB=4.93707e-05;MQSB=0.998363;RPB=0.860066;SGB=-0.101747;VDB=0.947111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D261N|913|LOC_Os10g17724|protein_coding|CODING|LOC_Os10g17724.1|3|1) FN3452-S.SNP.10:8964981 chr10:008964981 0 W/8964981-8964981 FN3452-S SNP T -> C AC=1;AN=184;BQB=0.998515;DP=2852;DP4=1417,1340,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.02549e-07;MQSB=0.909504;RPB=0.50929;SGB=25.1826;VDB=0.572112;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.10:8965560 chr10:008965560 0 W/8965560-8965560 FN3512-S SNP C -> T AC=1;AN=188;BQB=0.843563;DP=2812;DP4=1383,1366,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.47373e-10;MQSB=0.969016;RPB=0.912394;SGB=85.3253;VDB=0.34408;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.10:8966168 chr10:008966168 0 W/8966168-8966168 FN1572-S Single Base Substitution C-A INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1692-S.SNP.10:8968926 chr10:008968926 0 W/8968926-8968926 FN1692-S SNP A -> G AC=2;AN=188;BQB=0.481858;DP=3488;DP4=1671,1775,16,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.6705e-13;MQSB=0.995636;RPB=0.927059;SGB=-7.93693;VDB=0.655953;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.10:8969233 chr10:008969233 0 W/8969233-8969233 FN3727-S SNP C -> T AC=2;AN=190;BQB=0.985909;DP=2707;DP4=1354,1254,8,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.87783e-09;MQSB=0.892761;RPB=0.509525;SGB=46.7622;VDB=0.785373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.10:8972828 chr10:008972828 0 W/8972828-8972828 FN2215-S SNP G -> A AC=1;AN=190;BQB=0.99325;DP=3094;DP4=1417,1341,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.46036e-05;MQSB=0.272385;RPB=0.657943;SGB=35.4339;VDB=0.466689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.10:8979704 chr10:008979704 0 W/8979704-8979704 FN3377-S SNP C -> G AC=1;AN=184;BQB=0.53788;DP=2585;DP4=1152,1361,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.92439e-05;MQSB=0.979569;RPB=0.261134;SGB=8.14452;VDB=0.362242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.10:8989156 chr10:008989156 0 W/8989156-8989156 FN1252-S Single Base Substitution T-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN1252-S.SNP.10:8989157 chr10:008989157 0 W/8989157-8989157 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3549-S.SNP.10:8991819 chr10:008991819 0 W/8991819-8991819 FN3549-S SNP A -> G AC=1;AN=188;BQB=0.601604;DP=2625;DP4=1137,1434,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.08573e-05;MQSB=0.949301;RPB=0.961636;SGB=21.8113;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.10:8998982 chr10:008998982 0 W/8998982-8998982 FN3553-S SNP T -> G AC=1;AN=188;BQB=0.619824;DP=2836;DP4=1027,1520,5,20;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.07956e-09;MQSB=0.997638;RPB=0.170992;SGB=-157.8;VDB=0.611074;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggG|G428|455|LOC_Os10g17780|protein_coding|CODING|LOC_Os10g17780.1|1|1) FN784-S.SNP.10:9006180 chr10:009006180 0 W/9006180-9006180 FN784-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g17800 retrotransposon protein, putative, unclassified, expressed SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN1687-S.SNP.10:9008793 chr10:009008793 0 W/9008793-9008793 FN1687-S SNP G -> C AC=1;AN=188;BQB=0.954596;DP=2434;DP4=859,1538,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00205423;MQB=3.56737e-08;MQSB=0.570406;RPB=0.828878;SGB=50.1574;VDB=0.346701;EFF=INTRON(MODIFIER||||58|LOC_Os10g17810|protein_coding|CODING|LOC_Os10g17810.1|1|1) FN-255.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN-255 Single Base Substitution C-T INTRON HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1142-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN1142-S Single Base Substitution C-T INTRON HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1751-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN1751-S SNP C -> T AC=1;AN=188;BQB=0.676652;DP=1485;DP4=449,998,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.38117e-05;MQSB=0.966262;RPB=0.635087;SGB=26.2637;VDB=0.929286;EFF=INTRON(MODIFIER||||58|LOC_Os10g17810|protein_coding|CODING|LOC_Os10g17810.1|1|1) FN4184-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN4184-S SNP C -> T AC=2;AN=170;BQB=1;DP=2744;DP4=1217,1442,8,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.63164e-14;MQSB=0.963567;RPB=0.99824;SGB=96.7413;VDB=0.786549;EFF=INTRON(MODIFIER||||58|LOC_Os10g17810|protein_coding|CODING|LOC_Os10g17810.1|1|1) FN480-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN480-S Single Base Substitution C-T INTRON HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN540-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN540-S Single Base Substitution C-T INTRON HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN739-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN739-S Single Base Substitution C-T INTRON HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.10:9009080 chr10:009009080 0 W/9009080-9009080 FN988-S Single Base Substitution C-T INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3440-S.SNP.10:9009645 chr10:009009645 0 W/9009645-9009645 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.665001;DP=3799;DP4=1828,1850,12,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00085e-13;MQSB=0.794806;RPB=0.535323;SGB=43.4494;VDB=0.604316;EFF=INTRON(MODIFIER||||58|LOC_Os10g17810|protein_coding|CODING|LOC_Os10g17810.1|1|1) FN1396-S.SNP.10:9013621 chr10:009013621 0 W/9013621-9013621 FN1396-S Single Base Substitution C-A INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN735-S.SNP.10:9013621 chr10:009013621 0 W/9013621-9013621 FN735-S Single Base Substitution C-A INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN_770-6-1.SNP.10:9016230 chr10:009016230 0 W/9016230-9016230 FN_770-6-1 Single Base Substitution G-A Homo LOC_Os10g17820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN483-S.SNP.10:9017351 chr10:009017351 0 W/9017351-9017351 FN483-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g17820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1590-S.SNP.10:9020077 chr10:009020077 0 W/9020077-9020077 FN1590-S Single Base Substitution G-C INTERGENIC Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN2317.SNP.10:9022783 chr10:009022783 0 W/9022783-9022783 FN2317 SNP C -> T AC=1;AN=192;BQB=0.243676;DP=4852;DP4=2479,2120,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0210223;MQB=0.239918;MQSB=0;RPB=0.998586;SGB=-34.8921;VDB=0.980131;EFF=INTERGENIC(MODIFIER||||||||||1) FN619-S.SNP.10:9028900 chr10:009028900 0 W/9028900-9028900 FN619-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN2469.SNP.10:9030578 chr10:009030578 0 W/9030578-9030578 FN2469 SNP G -> T AC=1;AN=200;BQB=0.692129;DP=4376;DP4=2131,2052,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.09404e-08;MQSB=0.998911;RPB=0.799261;SGB=40.2696;VDB=0.0416222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R91M|426|LOC_Os10g17850|protein_coding|CODING|LOC_Os10g17850.1|2|1) FN3879-S.SNP.10:9034193 chr10:009034193 0 W/9034193-9034193 FN3879-S SNP A -> G AC=1;AN=158;BQB=0.984157;DP=2346;DP4=1001,1214,9,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.3289e-13;MQSB=0.99058;RPB=0.820897;SGB=67.7679;VDB=0.389419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tCg|L603S|760|LOC_Os10g17870|protein_coding|CODING|LOC_Os10g17870.1|8|1) FN1031-S.SNP.10:9036224 chr10:009036224 0 W/9036224-9036224 FN1031-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3801-S.SNP.10:9037232 chr10:009037232 0 W/9037232-9037232 FN3801-S SNP G -> A AC=1;AN=190;BQB=0.906924;DP=2740;DP4=1251,1358,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.78317e-07;MQSB=0.953909;RPB=0.909512;SGB=39.9877;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.10:9042949 chr10:009042949 0 W/9042949-9042949 FN466-S Single Base Substitution T-C INTERGENIC HOMO SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN1278-S.SNP.10:9048183 chr10:009048183 0 W/9048183-9048183 FN1278-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g17900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2725-S.SNP.10:9049350 chr10:009049350 0 W/9049350-9049350 FN2725-S SNP C -> T AC=2;AN=200;BQB=0.996369;DP=4813;DP4=2219,2326,12,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.07891e-23;MQSB=0.782216;RPB=0.341268;SGB=89.4038;VDB=0.637075;EFF=INTRON(MODIFIER||||1594|LOC_Os10g17900|protein_coding|CODING|LOC_Os10g17900.1|3|1) FN-68.SNP.10:9050846 chr10:009050846 0 W/9050846-9050846 FN-68 Single Base Substitution T-A INTRON HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN_827-1.SNP.10:9050846 chr10:009050846 0 W/9050846-9050846 FN_827-1 Single Base Substitution T-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1162-S.SNP.10:9051233 chr10:009051233 0 W/9051233-9051233 FN1162-S Single Base Substitution G-C INTRON HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3301-S.SNP.10:9052411 chr10:009052411 0 W/9052411-9052411 FN3301-S SNP C -> T AC=2;AN=184;BQB=0.999758;DP=3322;DP4=1656,1538,14,8;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.012643;MQB=0.357351;MQSB=2.02037e-19;RPB=0.618511;SGB=67.4439;VDB=0.127208;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.10:9058330 chr10:009058330 0 W/9058330-9058330 FN3677-S SNP C -> G AC=2;AN=190;BQB=0.986317;DP=2807;DP4=1407,1280,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.73987e-16;MQSB=0.950034;RPB=0.434442;SGB=89.4087;VDB=0.662544;EFF=INTERGENIC(MODIFIER||||||||||1) FN967-S.SNP.10:9065902 chr10:009065902 0 W/9065902-9065902 FN967-S Single Base Substitution C-T INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN1254-S.SNP.10:9070010 chr10:009070010 0 W/9070010-9070010 FN1254-S Single Base Substitution C-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN-98.SNP.10:9070370 chr10:009070370 0 W/9070370-9070370 FN-98 Single Base Substitution C-T INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1368-S.SNP.10:9076400 chr10:009076400 0 W/9076400-9076400 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN625-S.SNP.10:9077331 chr10:009077331 0 W/9077331-9077331 FN625-S Single Base Substitution G-A INTERGENIC HET SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3800-S.SNP.10:9077998 chr10:009077998 0 W/9077998-9077998 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.995366;DP=2473;DP4=1233,1145,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2074e-07;MQSB=0.999011;RPB=0.812819;SGB=44.5415;VDB=0.0249134;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.10:9082058 chr10:009082058 0 W/9082058-9082058 FN402-S Single Base Substitution T-A INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN2195-S.SNP.10:9086118 chr10:009086118 0 W/9086118-9086118 FN2195-S SNP G -> T AC=1;AN=190;BQB=0.866931;DP=4984;DP4=2349,2296,15,18;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000401284;MQB=4.10041e-14;MQSB=0.962834;RPB=0.98266;SGB=144.727;VDB=0.540811;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.10:9088569 chr10:009088569 0 W/9088569-9088569 FN2782-S SNP T -> G AC=1;AN=198;BQB=0.226173;DP=4093;DP4=1922,1848,12,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.92935e-18;MQSB=0.918578;RPB=0.976941;SGB=146.046;VDB=0.987828;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E611A|687|LOC_Os10g17950|protein_coding|CODING|LOC_Os10g17950.1|7|1) FN4224-S.SNP.10:9093118 chr10:009093118 0 W/9093118-9093118 FN4224-S SNP T -> G AC=1;AN=170;BQB=0.73747;DP=2217;DP4=1016,1102,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.85736e-06;MQSB=0.997189;RPB=0.906091;SGB=47.8722;VDB=0.892694;EFF=INTRON(MODIFIER||||687|LOC_Os10g17950|protein_coding|CODING|LOC_Os10g17950.1|1|1) FN960-S.SNP.10:9100389 chr10:009100389 0 W/9100389-9100389 FN960-S Single Base Substitution G-C INTERGENIC HET SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1741-S.SNP.10:9100624 chr10:009100624 0 W/9100624-9100624 FN1741-S SNP G -> A AC=1;AN=188;BQB=0.653079;DP=3383;DP4=1636,1693,15,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.58814e-15;MQSB=0.785037;RPB=0.905775;SGB=-115.921;VDB=0.622437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.10:9103389 chr10:009103389 0 W/9103389-9103389 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.53669;DP=2849;DP4=1437,1302,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000111003;MQSB=0.996403;RPB=0.914399;SGB=32.5467;VDB=0.947919;EFF=SPLICE_SITE_REGION(LOW||||680|LOC_Os10g17960|protein_coding|CODING|LOC_Os10g17960.1|2|1),INTRON(MODIFIER||||680|LOC_Os10g17960|protein_coding|CODING|LOC_Os10g17960.1|2|1) FN3485-S.SNP.10:9106286 chr10:009106286 0 W/9106286-9106286 FN3485-S SNP G -> A AC=1;AN=184;BQB=0.944165;DP=2387;DP4=1247,1071,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00921659;MQB=6.64082e-05;MQSB=0.0093293;RPB=0.999893;SGB=39.699;VDB=0.346864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.10:9108695 chr10:009108695 0 W/9108695-9108695 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.858073;DP=2696;DP4=1353,1290,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.93258e-08;MQSB=0.363877;RPB=0.359073;SGB=67.1521;VDB=0.682027;EFF=INTRON(MODIFIER||||753|LOC_Os10g17970|protein_coding|CODING|LOC_Os10g17970.1|3|1) FN3401-S.SNP.10:9113846 chr10:009113846 0 W/9113846-9113846 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.870495;DP=3006;DP4=1228,1668,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00598802;MQB=2.63912e-06;MQSB=0.99865;RPB=0.462674;SGB=39.699;VDB=0.532765;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P453|925|LOC_Os10g17980|protein_coding|CODING|LOC_Os10g17980.1|3|1) FN2489.SNP.10:9116799 chr10:009116799 0 W/9116799-9116799 FN2489 SNP C -> A AC=1;AN=200;BQB=0.620789;DP=4587;DP4=2407,2000,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218007;MQB=3.7291e-11;MQSB=0.784286;RPB=0.982768;SGB=72.6852;VDB=0.9278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.10:9118221 chr10:009118221 0 W/9118221-9118221 FN2453 SNP G -> A AC=1;AN=200;BQB=0.991973;DP=4509;DP4=1978,2315,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.12249e-10;MQSB=0.999904;RPB=0.284809;SGB=54.6902;VDB=0.682974;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.10:9130924 chr10:009130924 0 W/9130924-9130924 FN887-S Single Base Substitution C-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN669-S.SNP.10:9131285 chr10:009131285 0 W/9131285-9131285 FN669-S Single Base Substitution C-A INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2461.SNP.10:9132429 chr10:009132429 0 W/9132429-9132429 FN2461 SNP C -> T AC=2;AN=200;BQB=0.911332;DP=3393;DP4=1438,1656,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.62723e-19;MQSB=0.999939;RPB=0.448102;SGB=164.789;VDB=0.443182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.10:9133926 chr10:009133926 0 W/9133926-9133926 FN3282-S SNP A -> G AC=1;AN=184;BQB=0.522624;DP=2761;DP4=1272,1346,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00246784;MQSB=0.35718;RPB=0.48286;SGB=28.7043;VDB=0.319126;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.10:9136423 chr10:009136423 0 W/9136423-9136423 FN984-S Single Base Substitution A-T INTERGENIC HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-362.SNP.10:9145015 chr10:009145015 0 W/9145015-9145015 FN-362 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g18042 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN684-S.SNP.10:9145501 chr10:009145501 0 W/9145501-9145501 FN684-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g18042 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1406-S.SNP.10:9149409 chr10:009149409 0 W/9149409-9149409 FN1406-S Single Base Substitution G-A INTERGENIC HET SNo: 1184, Mutant_ID: FN1406-S, Generation: M2, Mutations: 81, Genes: 9, Seed availability: Yes. FN3421-S.SNP.10:9152146 chr10:009152146 0 W/9152146-9152146 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.951788;DP=2611;DP4=1158,1309,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.01382e-05;MQSB=0.307911;RPB=0.961423;SGB=35.1773;VDB=0.834562;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.10:9159363 chr10:009159363 0 W/9159363-9159363 FN814-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g18070 expressed protein SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN4255-S.SNP.10:9162852 chr10:009162852 0 W/9162852-9162852 FN4255-S SNP A -> G AC=1;AN=170;BQB=0.998499;DP=3102;DP4=1432,1511,12,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.06999e-13;MQSB=0.991819;RPB=0.38051;SGB=34.5398;VDB=0.816542;EFF=INTRON(MODIFIER||||422|LOC_Os10g18070|protein_coding|CODING|LOC_Os10g18070.1|3|1) FN2614-S.SNP.10:9176857 chr10:009176857 0 W/9176857-9176857 FN2614-S SNP T -> C AC=2;AN=198;BQB=0.54547;DP=3989;DP4=2007,1768,28,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.30688e-23;MQSB=0.68288;RPB=0.711751;SGB=148.003;VDB=0.170516;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.10:9177195 chr10:009177195 0 W/9177195-9177195 FN3057-S SNP C -> A AC=1;AN=184;BQB=0.990072;DP=3480;DP4=1872,1491,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.52185e-11;MQSB=0.850568;RPB=0.417909;SGB=38.4058;VDB=0.992969;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.10:9179158 chr10:009179158 0 W/9179158-9179158 FN2173-S SNP T -> C AC=2;AN=168;BQB=0.00364558;DP=3470;DP4=1528,1881,21,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.24938e-15;MQSB=0.89523;RPB=0.155166;SGB=-104.159;VDB=0.538106;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.10:9183788 chr10:009183788 0 W/9183788-9183788 FN2724-S SNP A -> G AC=2;AN=200;BQB=0.805145;DP=4708;DP4=2361,1993,26,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.20539e-19;MQSB=0.827988;RPB=0.963826;SGB=-0.401659;VDB=0.520244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.10:9193666 chr10:009193666 0 W/9193666-9193666 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.992483;DP=4320;DP4=1993,2088,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.18892e-09;MQSB=0.830244;RPB=0.951902;SGB=7.75428;VDB=0.728711;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.10:9196182 chr10:009196182 0 W/9196182-9196182 FN733-S Single Base Substitution A-T INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN1563-S.SNP.10:9198301 chr10:009198301 0 W/9198301-9198301 FN1563-S Single Base Substitution A-T INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN4120-S.SNP.10:9203837 chr10:009203837 0 W/9203837-9203837 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.954033;DP=3160;DP4=1276,1754,7,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.83132e-11;MQSB=0.90831;RPB=0.225461;SGB=33.1875;VDB=0.279123;EFF=INTERGENIC(MODIFIER||||||||||1) FN-126.SNP.10:9204919 chr10:009204919 0 W/9204919-9204919 FN-126 Single Base Substitution A-G INTERGENIC HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3395-S.SNP.10:9214043 chr10:009214043 0 W/9214043-9214043 FN3395-S SNP G -> T AC=2;AN=184;BQB=0.992823;DP=3709;DP4=1919,1660,16,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.65526e-16;MQSB=0.805063;RPB=0.254869;SGB=134.656;VDB=0.0882759;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L304|711|LOC_Os10g18150|protein_coding|CODING|LOC_Os10g18150.1|1|1) FN3530-S.SNP.10:9223368 chr10:009223368 0 W/9223368-9223368 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.463113;DP=3349;DP4=1568,1726,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.0988355;MQB=0.879961;MQSB=0;RPB=0.861627;SGB=80.782;VDB=0.78834;EFF=INTRON(MODIFIER||||1538|LOC_Os10g18160|protein_coding|CODING|LOC_Os10g18160.1|5|1) FN2283.SNP.10:9225829 chr10:009225829 0 W/9225829-9225829 FN2283 SNP T -> G AC=2;AN=192;BQB=0.789006;DP=4897;DP4=1958,2596,32,27;HOB=0.0206163;ICB=0.494846;MQ=23;MQ0F=0.133551;MQB=0.338574;MQSB=2.10732e-14;RPB=0.858924;SGB=136.617;VDB=0.00153865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.10:9228922 chr10:009228922 0 W/9228922-9228922 FN1441-S Single Base Substitution C-T INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2659-S.SNP.10:9235004 chr10:009235004 0 W/9235004-9235004 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.917183;DP=4985;DP4=2384,2370,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.16864e-08;MQSB=0.96121;RPB=0.875554;SGB=21.6694;VDB=0.92993;EFF=INTERGENIC(MODIFIER||||||||||1) FN981-S.SNP.10:9237640 chr10:009237640 0 W/9237640-9237640 FN981-S Single Base Substitution A-C INTERGENIC HET SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1236-S.SNP.10:9237828 chr10:009237828 0 W/9237828-9237828 FN1236-S Single Base Substitution G-A INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN2196-S.SNP.10:9238880 chr10:009238880 0 W/9238880-9238880 FN2196-S SNP G -> A AC=1;AN=190;BQB=0.462468;DP=4844;DP4=2140,2400,10,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00247729;MQB=1.78786e-12;MQSB=0.202736;RPB=0.854548;SGB=51.7524;VDB=0.581391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G63E|259|LOC_Os10g18190|protein_coding|CODING|LOC_Os10g18190.1|1|1) FN-68.SNP.10:9246378 chr10:009246378 0 W/9246378-9246378 FN-68 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g18200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1321-S.SNP.10:9253598 chr10:009253598 0 W/9253598-9253598 FN1321-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g18210 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN2201-S.SNP.10:9261482 chr10:009261482 0 W/9261482-9261482 FN2201-S SNP C -> A AC=1;AN=190;BQB=0.164839;DP=4884;DP4=2414,2108,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000249037;MQSB=0.845404;RPB=0.113456;SGB=23.6597;VDB=0.358286;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.10:9265696 chr10:009265696 0 W/9265696-9265696 FN-250 Single Base Substitution G-A INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN-273.SNP.10:9266016 chr10:009266016 0 W/9266016-9266016 FN-273 Single Base Substitution A-G INTERGENIC HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2121-S.SNP.10:9271837 chr10:009271837 0 W/9271837-9271837 FN2121-S SNP C -> A AC=1;AN=168;BQB=0.505384;DP=4159;DP4=2031,2075,16,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.38503e-18;MQSB=0.9986;RPB=0.493614;SGB=96.5026;VDB=0.259248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.10:9271962 chr10:009271962 0 W/9271962-9271962 FN3541-S SNP C -> T AC=1;AN=188;BQB=0.646536;DP=2675;DP4=1170,1422,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.50061e-05;MQSB=0.989224;RPB=0.973375;SGB=21.8113;VDB=0.567736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.10:9272945 chr10:009272945 0 W/9272945-9272945 FN3311-S SNP A -> T AC=1;AN=184;BQB=0.805997;DP=2965;DP4=1428,1403,15,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.74267e-15;MQSB=0.991425;RPB=0.981095;SGB=48.493;VDB=0.411374;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.10:9272946 chr10:009272946 0 W/9272946-9272946 FN3311-S SNP C -> T AC=1;AN=184;BQB=0.870598;DP=2975;DP4=1450,1390,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.04109e-14;MQSB=0.96746;RPB=0.900687;SGB=89.4385;VDB=0.405324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.10:9273137 chr10:009273137 0 W/9273137-9273137 FN3901-S SNP T -> G AC=2;AN=158;BQB=0.993876;DP=2702;DP4=1310,1273,19,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.00065e-17;MQSB=0.891449;RPB=0.950286;SGB=94.7235;VDB=0.4946;EFF=INTERGENIC(MODIFIER||||||||||1) FN-366.SNP.10:9274482 chr10:009274482 0 W/9274482-9274482 FN-366 Single Base Substitution G-A INTERGENIC HET SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN474-S.SNP.10:9274750 chr10:009274750 0 W/9274750-9274750 FN474-S Single Base Substitution A-G INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. W385-6-8-4.SNP.10:9278119 chr10:009278119 0 W/9278119-9278119 W385-6-8-4 Single Base Substitution G-A INTERGENIC HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN-133.SNP.10:9278161 chr10:009278161 0 W/9278161-9278161 FN-133 Single Base Substitution A-G UTR_3_PRIME HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN833-S.SNP.10:9278307 chr10:009278307 0 W/9278307-9278307 FN833-S Single Base Substitution T-C STOP_LOST HOMO LOC_Os10g18260 TKL_IRAK_DUF26-lc.27 - DUF26 kinases have homology to DUF26 containing loci, expressed SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. W706-3-1.SNP.10:9280906 chr10:009280906 0 W/9280906-9280906 W706-3-1 Single Base Substitution C-T INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN927-S.SNP.10:9287344 chr10:009287344 0 W/9287344-9287344 FN927-S Single Base Substitution T-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN-113.SNP.10:9287451 chr10:009287451 0 W/9287451-9287451 FN-113 Single Base Substitution A-T INTERGENIC HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN3301-S.SNP.10:9289823 chr10:009289823 0 W/9289823-9289823 FN3301-S SNP T -> A AC=2;AN=184;BQB=0.852243;DP=3837;DP4=1763,1937,10,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.26875e-19;MQSB=0.998094;RPB=0.708658;SGB=130.135;VDB=0.38432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.10:9289824 chr10:009289824 0 W/9289824-9289824 FN3301-S SNP C -> A AC=2;AN=184;BQB=0.995436;DP=3830;DP4=1727,1900,12,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.06939e-21;MQSB=0.991287;RPB=0.976881;SGB=68.6673;VDB=0.53031;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.10:9293701 chr10:009293701 0 W/9293701-9293701 FN3555-S SNP G -> C AC=1;AN=188;BQB=0.866163;DP=3326;DP4=1584,1685,11,6;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0484065;MQB=0.51124;MQSB=9.4226e-16;RPB=0.408743;SGB=50.1574;VDB=0.920944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.10:9294787 chr10:009294787 0 W/9294787-9294787 FN2555-S SNP A -> G AC=1;AN=198;BQB=0.945043;DP=3691;DP4=1447,1843,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0111081;MQB=0.000784591;MQSB=0.0420176;RPB=0.479495;SGB=25.7687;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.10:9297233 chr10:009297233 0 W/9297233-9297233 FN2566-S SNP T -> A AC=1;AN=198;BQB=0.762607;DP=5341;DP4=2592,2487,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.14267;MQB=0.872611;MQSB=1.52325e-16;RPB=0.912826;SGB=35.7638;VDB=0.695961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L1192F|1683|LOC_Os10g18294|protein_coding|CODING|LOC_Os10g18294.1|5|1) FN3673-S.SNP.10:9298284 chr10:009298284 0 W/9298284-9298284 FN3673-S SNP C -> A AC=2;AN=190;BQB=0.99992;DP=3060;DP4=1556,1356,21,12;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00588235;MQB=1.03055e-13;MQSB=0.0600241;RPB=0.0566799;SGB=144.727;VDB=0.00814404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R842I|1683|LOC_Os10g18294|protein_coding|CODING|LOC_Os10g18294.1|5|1) FN755-S.SNP.10:9299183 chr10:009299183 0 W/9299183-9299183 FN755-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN477-S.SNP.10:9301158 chr10:009301158 0 W/9301158-9301158 FN477-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g18294 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1577-S.SNP.10:9301280 chr10:009301280 0 W/9301280-9301280 FN1577-S Single Base Substitution G-A INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1727-S.SNP.10:9303056 chr10:009303056 0 W/9303056-9303056 FN1727-S SNP C -> A AC=2;AN=188;BQB=0.434132;DP=2929;DP4=1516,1368,15,12;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.00580403;MQB=0.386172;MQSB=1.38792e-23;RPB=0.999988;SGB=54.0524;VDB=0.709637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.10:9313650 chr10:009313650 0 W/9313650-9313650 FN3818-S SNP C -> A AC=1;AN=190;BQB=0.98581;DP=2610;DP4=1132,1366,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.98601e-15;MQSB=0.96643;RPB=0.0602928;SGB=112.85;VDB=0.757255;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.10:9316889 chr10:009316889 0 W/9316889-9316889 FN764-S Single Base Substitution G-C INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN2674-S.SNP.10:9318844 chr10:009318844 0 W/9318844-9318844 FN2674-S SNP T -> A AC=1;AN=200;BQB=1;DP=3737;DP4=1919,1586,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000267594;MQB=1.05212e-08;MQSB=0.581618;RPB=0.997647;SGB=68.0801;VDB=0.698795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.10:9318844 chr10:009318844 0 W/9318844-9318844 FN3436-S SNP T -> A AC=1;AN=184;BQB=0.0384935;DP=1957;DP4=1359,397,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000311878;MQSB=1.58361e-05;RPB=0.170261;SGB=-17.3229;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.10:9318871 chr10:009318871 0 W/9318871-9318871 FN1006-S Single Base Substitution G-A INTERGENIC HET SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2589-S.SNP.10:9331813 chr10:009331813 0 W/9331813-9331813 FN2589-S SNP A -> T AC=1;AN=198;BQB=0.782298;DP=4285;DP4=2162,1894,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.83345e-16;MQSB=0.99382;RPB=0.721983;SGB=79.6954;VDB=0.0893316;EFF=INTRON(MODIFIER||||251|LOC_Os10g18364|protein_coding|CODING|LOC_Os10g18364.1|1|1) FN940-S.SNP.10:9339336 chr10:009339336 0 W/9339336-9339336 FN940-S Single Base Substitution T-C INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3389-S.SNP.10:9339654 chr10:009339654 0 W/9339654-9339654 FN3389-S SNP T -> C AC=2;AN=184;BQB=0.0198369;DP=1775;DP4=1028,623,18,5;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00056338;MQB=2.10559e-09;MQSB=0.00652726;RPB=0.0797216;SGB=-149.165;VDB=0.934874;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.10:9339915 chr10:009339915 0 W/9339915-9339915 FN1392-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3651-S.SNP.10:9339915 chr10:009339915 0 W/9339915-9339915 FN3651-S SNP C -> T AC=2;AN=190;BQB=0.983245;DP=2715;DP4=1936,635,24,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30235e-17;MQSB=0.0369282;RPB=0.958809;SGB=92.9626;VDB=0.737455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.10:9339915 chr10:009339915 0 W/9339915-9339915 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.987867;DP=2601;DP4=1852,619,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.73472e-07;MQSB=0.0353415;RPB=0.996151;SGB=53.6492;VDB=0.499456;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.10:9339915 chr10:009339915 0 W/9339915-9339915 FN4010-S SNP C -> T AC=2;AN=168;BQB=0.538006;DP=2559;DP4=1830,602,23,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.43874e-11;MQSB=0.0321652;RPB=0.903631;SGB=18.4989;VDB=0.419864;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.10:9343921 chr10:009343921 0 W/9343921-9343921 FN-179 Single Base Substitution T-C INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN1561-S.SNP.10:9351973 chr10:009351973 0 W/9351973-9351973 FN1561-S Single Base Substitution G-A INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN685-S.SNP.10:9357337 chr10:009357337 0 W/9357337-9357337 FN685-S Single Base Substitution T-C INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN1025-S.SNP.10:9357788 chr10:009357788 0 W/9357788-9357788 FN1025-S Single Base Substitution G-A INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-329.SNP.10:9366745 chr10:009366745 0 W/9366745-9366745 FN-329 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g18420 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-329.SNP.10:9366746 chr10:009366746 0 W/9366746-9366746 FN-329 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g18420 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3758-S.SNP.10:9368367 chr10:009368367 0 W/9368367-9368367 FN3758-S SNP A -> G AC=2;AN=190;BQB=0.679989;DP=2989;DP4=1345,1502,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.77269e-19;MQSB=0.926519;RPB=0.992415;SGB=131.065;VDB=0.166252;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.10:9372379 chr10:009372379 0 W/9372379-9372379 FN517-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g18440 retrotransposon protein, putative, unclassified, expressed SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN3539-S.SNP.10:9377938 chr10:009377938 0 W/9377938-9377938 FN3539-S SNP A -> G AC=1;AN=188;BQB=0.991385;DP=2819;DP4=1073,1657,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56283e-05;MQSB=0.917193;RPB=0.892578;SGB=39.8925;VDB=0.0417261;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G255|267|LOC_Os10g18450|protein_coding|CODING|LOC_Os10g18450.1|2|1) FN2395.SNP.10:9378284 chr10:009378284 0 W/9378284-9378284 FN2395 SNP A -> T AC=1;AN=200;BQB=0.898866;DP=3608;DP4=1682,1523,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27662e-10;MQSB=0.996769;RPB=0.995653;SGB=-13.1102;VDB=0.743763;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.10:9381625 chr10:009381625 0 W/9381625-9381625 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.974587;DP=2445;DP4=1231,1153,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.56677e-10;MQSB=0.909046;RPB=0.7888;SGB=55.5339;VDB=0.659235;EFF=INTRON(MODIFIER||||71|LOC_Os10g18460|protein_coding|CODING|LOC_Os10g18460.1|1|1) FN1067-S.SNP.10:9385786 chr10:009385786 0 W/9385786-9385786 FN1067-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g18480 glucosyltransferase, putative, expressed SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN4224-S.SNP.10:9390990 chr10:009390990 0 W/9390990-9390990 FN4224-S SNP A -> G AC=1;AN=170;BQB=0.994128;DP=2544;DP4=1337,1061,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.92789e-10;MQSB=0.997974;RPB=0.996923;SGB=7.21777;VDB=0.317026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.10:9391925 chr10:009391925 0 W/9391925-9391925 FN1492-S Single Base Substitution G-A INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN870-S.SNP.10:9394775 chr10:009394775 0 W/9394775-9394775 FN870-S Single Base Substitution A-T INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN1053-S.SNP.10:9402255 chr10:009402255 0 W/9402255-9402255 FN1053-S Single Base Substitution T-C INTERGENIC HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN4095-S.SNP.10:9406615 chr10:009406615 0 W/9406615-9406615 FN4095-S SNP A -> G AC=1;AN=182;BQB=0.774507;DP=2279;DP4=967,908,11,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.36044e-06;MQSB=0.963622;RPB=0.987194;SGB=-54.8773;VDB=0.233161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.10:9406931 chr10:009406931 0 W/9406931-9406931 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.966028;DP=2595;DP4=1053,1312,9,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.72862e-09;MQSB=0.00721832;RPB=0.81414;SGB=67.4439;VDB=0.177091;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.10:9409135 chr10:009409135 0 W/9409135-9409135 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.866038;DP=3151;DP4=1495,1500,15,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.13772e-10;MQSB=0.999998;RPB=0.390017;SGB=35.884;VDB=0.155969;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K204R|718|LOC_Os10g18550|protein_coding|CODING|LOC_Os10g18550.1|3|1) FN1213-S.SNP.10:9409951 chr10:009409951 0 W/9409951-9409951 FN1213-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g18550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN1213-S.SNP.10:9409952 chr10:009409952 0 W/9409952-9409952 FN1213-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN-310.SNP.10:9410137 chr10:009410137 0 W/9410137-9410137 FN-310 Single Base Substitution C-T INTRON HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN851-S.SNP.10:9411195 chr10:009411195 0 W/9411195-9411195 FN851-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN3720-S.SNP.10:9415530 chr10:009415530 0 W/9415530-9415530 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.820239;DP=2689;DP4=1015,1532,2,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0185943;MQB=0.00415413;MQSB=6.59854e-19;RPB=0.926255;SGB=58.2031;VDB=0.930262;EFF=INTRON(MODIFIER||||989|LOC_Os10g18560|protein_coding|CODING|LOC_Os10g18560.1|1|1) FN2651-S.SNP.10:9418213 chr10:009418213 0 W/9418213-9418213 FN2651-S SNP T -> C AC=1;AN=200;BQB=0.615009;DP=4816;DP4=2204,2311,16,11;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.327865;MQB=0.0518137;MQSB=9.41747e-14;RPB=0.842631;SGB=23.9365;VDB=0.810596;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.10:9418972 chr10:009418972 0 W/9418972-9418972 FN4160-S SNP C -> T AC=2;AN=170;BQB=0.945514;DP=2534;DP4=1328,1136,13,9;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.0142068;MQB=0.0310061;MQSB=1.85041e-41;RPB=0.997288;SGB=65.8619;VDB=0.318432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.10:9430289 chr10:009430289 0 W/9430289-9430289 FN2200-S SNP A -> G AC=1;AN=190;BQB=0.370183;DP=4968;DP4=2290,2398,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.119767;MQB=0.983813;MQSB=0;RPB=0.818987;SGB=71.8647;VDB=0.787424;EFF=INTRON(MODIFIER||||543|LOC_Os10g18590|protein_coding|CODING|LOC_Os10g18590.1|2|1) FN2661-S.SNP.10:9435241 chr10:009435241 0 W/9435241-9435241 FN2661-S SNP A -> T AC=1;AN=200;BQB=0.46434;DP=4158;DP4=1707,2207,10,18;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.205147;MQB=0.934862;MQSB=1.185e-13;RPB=0.735617;SGB=123.342;VDB=0.561379;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.10:9436100 chr10:009436100 0 W/9436100-9436100 FN937-S Single Base Substitution C-A INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN988-S.SNP.10:9439302 chr10:009439302 0 W/9439302-9439302 FN988-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g18610 retrotransposon protein, putative, unclassified, expressed SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1583-S.SNP.10:9439978 chr10:009439978 0 W/9439978-9439978 FN1583-S Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-112.SNP.10:9442230 chr10:009442230 0 W/9442230-9442230 FN-112 Single Base Substitution C-T INTERGENIC HOMO SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN3829-S.SNP.10:9447584 chr10:009447584 0 W/9447584-9447584 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.913798;DP=2895;DP4=1393,1385,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0262522;MQB=0.0152475;MQSB=0.343757;RPB=0.990013;SGB=28.7675;VDB=0.311164;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.10:9448611 chr10:009448611 0 W/9448611-9448611 FN768-S Single Base Substitution C-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN477-S.SNP.10:9450328 chr10:009450328 0 W/9450328-9450328 FN477-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g18630 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN1012-S.SNP.10:9450421 chr10:009450421 0 W/9450421-9450421 FN1012-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN536-S.SNP.10:9458357 chr10:009458357 0 W/9458357-9458357 FN536-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g18650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN573-S.SNP.10:9463925 chr10:009463925 0 W/9463925-9463925 FN573-S Single Base Substitution C-T INTRON HOMO SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN1020-S.SNP.10:9463928 chr10:009463928 0 W/9463928-9463928 FN1020-S Single Base Substitution G-T INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN1020-S.SNP.10:9463930 chr10:009463930 0 W/9463930-9463930 FN1020-S Single Base Substitution G-C INTRON HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN722-S.SNP.10:9469208 chr10:009469208 0 W/9469208-9469208 FN722-S Single Base Substitution T-C INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN1718-S.SNP.10:9472665 chr10:009472665 0 W/9472665-9472665 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.301266;DP=2736;DP4=1553,1151,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000365497;MQB=5.64154e-06;MQSB=0.772791;RPB=0.770662;SGB=-13.3699;VDB=0.138612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.10:9473207 chr10:009473207 0 W/9473207-9473207 FN2331 SNP G -> T AC=1;AN=190;BQB=0.887378;DP=3909;DP4=2020,1626,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.97191e-08;MQSB=0.886703;RPB=0.667428;SGB=32.6514;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.10:9473208 chr10:009473208 0 W/9473208-9473208 FN2331 SNP A -> G AC=1;AN=190;BQB=0.70179;DP=3907;DP4=2004,1604,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43481e-08;MQSB=0.835552;RPB=0.796667;SGB=18.6565;VDB=0.0791717;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.10:9473808 chr10:009473808 0 W/9473808-9473808 FN818-S Single Base Substitution G-A INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN1673-S.SNP.10:9478117 chr10:009478117 0 W/9478117-9478117 FN1673-S SNP A -> G AC=1;AN=188;BQB=0.35013;DP=2621;DP4=1080,1514,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000381534;MQB=0.00115488;MQSB=0.0358259;RPB=0.866809;SGB=-57.5324;VDB=0.942252;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:9479335 chr10:009479335 0 W/9479335-9479335 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.809113;DP=4886;DP4=2042,2649,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=24;MQ0F=0.29124;MQB=0.833451;MQSB=4.04987e-29;RPB=0.83069;SGB=77.1196;VDB=0.875442;EFF=INTERGENIC(MODIFIER||||||||||1) FN913-S.SNP.10:9480326 chr10:009480326 0 W/9480326-9480326 FN913-S Single Base Substitution G-A INTERGENIC HET SNo: 819, Mutant_ID: FN913-S, Generation: M2, Mutations: 1, Genes: 0, Seed availability: Yes. FN3343-S.SNP.10:9483167 chr10:009483167 0 W/9483167-9483167 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.351884;DP=2613;DP4=1226,1319,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.190203;MQB=0.948782;MQSB=0.00149072;RPB=0.17368;SGB=44.2207;VDB=0.404531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N947D|1183|LOC_Os10g18670|protein_coding|CODING|LOC_Os10g18670.1|5|1) FN2263-S.SNP.10:9485861 chr10:009485861 0 W/9485861-9485861 FN2263-S SNP A -> T AC=1;AN=188;BQB=0.985227;DP=5366;DP4=2277,2716,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.338427;MQB=0.428451;MQSB=0;RPB=0.942104;SGB=28.9731;VDB=0.792078;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A529|1183|LOC_Os10g18670|protein_coding|CODING|LOC_Os10g18670.1|3|1) FN2307.SNP.10:9486221 chr10:009486221 0 W/9486221-9486221 FN2307 SNP A -> T AC=2;AN=190;BQB=0.872638;DP=4790;DP4=2206,2295,32,29;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0164927;MQB=0.0181318;MQSB=3.7352e-09;RPB=0.71474;SGB=207.304;VDB=0.126774;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y409*|1183|LOC_Os10g18670|protein_coding|CODING|LOC_Os10g18670.1|3|1);LOF=(LOC_Os10g18670|LOC_Os10g18670|1|1.00);NMD=(LOC_Os10g18670|LOC_Os10g18670|1|1.00) FN2470.SNP.10:9490988 chr10:009490988 0 W/9490988-9490988 FN2470 SNP A -> G AC=2;AN=200;BQB=0.903767;DP=4129;DP4=2044,1728,25,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.76856e-27;MQSB=0.976221;RPB=0.908104;SGB=8.07072;VDB=0.907004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.10:9491293 chr10:009491293 0 W/9491293-9491293 FN3596-S SNP C -> T AC=1;AN=188;BQB=0.824545;DP=2409;DP4=1302,1035,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.49978e-08;MQSB=0.957547;RPB=0.441317;SGB=58.0655;VDB=0.83714;EFF=INTERGENIC(MODIFIER||||||||||1) FN-220.SNP.10:9494061 chr10:009494061 0 W/9494061-9494061 FN-220 Single Base Substitution G-A INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN1414-S.SNP.10:9500864 chr10:009500864 0 W/9500864-9500864 FN1414-S Single Base Substitution C-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2673-S.SNP.10:9510491 chr10:009510491 0 W/9510491-9510491 FN2673-S SNP T -> C AC=2;AN=200;BQB=0.993196;DP=4837;DP4=2307,2274,27,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.40617e-32;MQSB=0.976294;RPB=0.715547;SGB=78.5122;VDB=0.0261088;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.10:9516453 chr10:009516453 0 W/9516453-9516453 FN832-S Single Base Substitution G-C INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN1284-S.SNP.10:9525800 chr10:009525800 0 W/9525800-9525800 FN1284-S Single Base Substitution T-C INTRON HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN411-S.SNP.10:9526788 chr10:009526788 0 W/9526788-9526788 FN411-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1732-S.SNP.10:9531009 chr10:009531009 0 W/9531009-9531009 FN1732-S SNP T -> C AC=1;AN=188;BQB=0.883698;DP=3468;DP4=1607,1814,21,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.44473e-17;MQSB=0.636887;RPB=0.891929;SGB=64.2256;VDB=0.0833303;EFF=INTRON(MODIFIER||||936|LOC_Os10g18740|protein_coding|CODING|LOC_Os10g18740.1|3|1) FN2782-S.SNP.10:9531671 chr10:009531671 0 W/9531671-9531671 FN2782-S SNP T -> A AC=1;AN=198;BQB=0.994782;DP=4061;DP4=1842,1986,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.2689e-08;MQSB=0.982853;RPB=0.994782;SGB=10.9445;VDB=0.860676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D215V|936|LOC_Os10g18740|protein_coding|CODING|LOC_Os10g18740.1|2|1) FN3434-S.SNP.10:9532637 chr10:009532637 0 W/9532637-9532637 FN3434-S SNP A -> T AC=1;AN=184;BQB=0.977648;DP=2489;DP4=1212,1173,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.50279e-07;MQSB=0.95168;RPB=0.558944;SGB=48.7425;VDB=0.923588;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.10:9534108 chr10:009534108 0 W/9534108-9534108 FN1505-S Single Base Substitution G-T INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1142-S.SNP.10:9537065 chr10:009537065 0 W/9537065-9537065 FN1142-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN3834-S.SNP.10:9537711 chr10:009537711 0 W/9537711-9537711 FN3834-S SNP G -> A AC=1;AN=190;BQB=0.935705;DP=3366;DP4=1884,1350,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000297089;MQB=1.39395e-05;MQSB=0.924683;RPB=0.497849;SGB=30.8803;VDB=0.00266632;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.10:9539218 chr10:009539218 0 W/9539218-9539218 FN2687-S SNP C -> A AC=1;AN=200;BQB=0.927935;DP=4987;DP4=2569,2159,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76885e-06;MQSB=0.938948;RPB=0.976826;SGB=13.8539;VDB=0.922495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.10:9539422 chr10:009539422 0 W/9539422-9539422 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.95273;DP=4276;DP4=1846,1935,20,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.3062e-19;MQSB=0.762667;RPB=0.999674;SGB=97.7221;VDB=0.317298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.10:9546825 chr10:009546825 0 W/9546825-9546825 FN2136-S SNP G -> A AC=1;AN=168;BQB=0.958832;DP=3754;DP4=1996,1714,29,2;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0428876;MQB=0.57346;MQSB=0.995714;RPB=0.163196;SGB=25.6529;VDB=0.000356386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.10:9550707 chr10:009550707 0 W/9550707-9550707 FN3298-S SNP T -> A AC=2;AN=184;BQB=0.972562;DP=3174;DP4=1533,1492,13,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.81838e-14;MQSB=0.522111;RPB=0.020689;SGB=112.047;VDB=0.0117004;EFF=INTERGENIC(MODIFIER||||||||||1) FN4174-S.SNP.10:9551019 chr10:009551019 0 W/9551019-9551019 FN4174-S SNP A -> G AC=1;AN=170;BQB=0.687702;DP=2318;DP4=1212,1024,7,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00275516;MQSB=0.918285;RPB=0.864803;SGB=30.1021;VDB=0.751795;EFF=INTERGENIC(MODIFIER||||||||||1) FN1746-S.SNP.10:9557998 chr10:009557998 0 W/9557998-9557998 FN1746-S SNP C -> T AC=1;AN=188;BQB=0.0073221;DP=1665;DP4=518,1102,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.0105014;MQSB=0.0794107;RPB=0.75465;SGB=-53.1623;VDB=0.762081;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.10:9559576 chr10:009559576 0 W/9559576-9559576 FN4040-S SNP G -> T AC=2;AN=168;BQB=0.987423;DP=2220;DP4=982,1114,8,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.15463e-13;MQSB=0.975287;RPB=0.868138;SGB=65.6253;VDB=0.21422;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.10:9559577 chr10:009559577 0 W/9559577-9559577 FN4040-S SNP G -> T AC=2;AN=168;BQB=0.964101;DP=2217;DP4=995,1113,8,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.70866e-13;MQSB=0.999547;RPB=0.844068;SGB=65.6253;VDB=0.226691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.10:9560492 chr10:009560492 0 W/9560492-9560492 FN1136-19-S Single Base Substitution G-C INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3407-S.SNP.10:9565118 chr10:009565118 0 W/9565118-9565118 FN3407-S SNP C -> G AC=1;AN=184;BQB=0.976025;DP=1918;DP4=724,1145,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00195429;MQSB=0.00862474;RPB=0.679009;SGB=30.6558;VDB=0.98214;EFF=INTERGENIC(MODIFIER||||||||||1) FN4180-S.SNP.10:9568452 chr10:009568452 0 W/9568452-9568452 FN4180-S SNP A -> T AC=1;AN=170;BQB=0.647239;DP=2233;DP4=1064,903,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000643012;MQSB=0.620005;RPB=0.967791;SGB=21.1076;VDB=0.3298;EFF=INTRON(MODIFIER||||75|LOC_Os10g18800|protein_coding|CODING|LOC_Os10g18800.1|1|1) FN1082-S.SNP.10:9568695 chr10:009568695 0 W/9568695-9568695 FN1082-S Single Base Substitution T-A INTRON HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN4116-S.SNP.10:9568712 chr10:009568712 0 W/9568712-9568712 FN4116-S SNP T -> A AC=1;AN=182;BQB=0.988416;DP=2708;DP4=1336,1314,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.17975e-06;MQSB=0.999756;RPB=0.952736;SGB=35.0899;VDB=0.259208;EFF=INTRON(MODIFIER||||75|LOC_Os10g18800|protein_coding|CODING|LOC_Os10g18800.1|1|1) FN4116-S.SNP.10:9568713 chr10:009568713 0 W/9568713-9568713 FN4116-S SNP G -> T AC=1;AN=182;BQB=0.989007;DP=2705;DP4=1340,1311,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.13624e-06;MQSB=0.999265;RPB=0.928887;SGB=35.0899;VDB=0.249799;EFF=INTRON(MODIFIER||||75|LOC_Os10g18800|protein_coding|CODING|LOC_Os10g18800.1|1|1) FN3615-S.SNP.10:9571337 chr10:009571337 0 W/9571337-9571337 FN3615-S SNP G -> A AC=2;AN=190;BQB=0.348338;DP=2481;DP4=1193,1192,17,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.83007e-11;MQSB=0.804394;RPB=0.938649;SGB=117.403;VDB=0.572098;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.10:9572171 chr10:009572171 0 W/9572171-9572171 FN-240 Single Base Substitution T-G INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN1759-S.SNP.10:9573390 chr10:009573390 0 W/9573390-9573390 FN1759-S SNP C -> T AC=2;AN=188;BQB=0.507921;DP=1592;DP4=624,804,6,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.39411e-08;MQSB=0.00627531;RPB=0.821884;SGB=53.5223;VDB=0.371239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1759-S.SNP.10:9573391 chr10:009573391 0 W/9573391-9573391 FN1759-S SNP C -> T AC=2;AN=188;BQB=0.0934373;DP=1596;DP4=626,802,7,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.15189e-07;MQSB=0.00362053;RPB=0.790734;SGB=39.5276;VDB=0.262455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2404.SNP.10:9575151 chr10:009575151 0 W/9575151-9575151 FN2404 SNP C -> T AC=2;AN=200;BQB=0.7969;DP=3754;DP4=1262,2262,15,28;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.027171;MQB=3.66454e-07;MQSB=3.91224e-18;RPB=0.982288;SGB=97.2193;VDB=0.530417;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A101|129|LOC_Os10g18810|protein_coding|CODING|LOC_Os10g18810.1|1|1) FN3310-S.SNP.10:9578608 chr10:009578608 0 W/9578608-9578608 FN3310-S SNP G -> T AC=1;AN=184;BQB=0.998316;DP=2291;DP4=1143,1040,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000436491;MQB=0.000362094;MQSB=0.000701193;RPB=0.997703;SGB=39.699;VDB=0.460358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.10:9582027 chr10:009582027 0 W/9582027-9582027 FN3514-S SNP G -> T AC=1;AN=188;BQB=0.77784;DP=2587;DP4=1063,1444,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.68819e-05;MQSB=0.789268;RPB=0.341485;SGB=28.8977;VDB=0.0422707;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.10:9583892 chr10:009583892 0 W/9583892-9583892 FN-163 Single Base Substitution T-G INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-127.SNP.10:9587541 chr10:009587541 0 W/9587541-9587541 FN-127 Single Base Substitution T-G INTRON HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1195-S.SNP.10:9589519 chr10:009589519 0 W/9589519-9589519 FN1195-S Single Base Substitution C-T INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN901-S.SNP.10:9590013 chr10:009590013 0 W/9590013-9590013 FN901-S Single Base Substitution C-T INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3743-S.SNP.10:9592234 chr10:009592234 0 W/9592234-9592234 FN3743-S SNP T -> C AC=1;AN=190;BQB=0.996001;DP=2818;DP4=1378,1335,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75774e-10;MQSB=0.876029;RPB=0.567266;SGB=8.77275;VDB=0.604441;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K572E|981|LOC_Os10g18840|protein_coding|CODING|LOC_Os10g18840.1|4|1) FN1292-S.SNP.10:9598097 chr10:009598097 0 W/9598097-9598097 FN1292-S Single Base Substitution G-A INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2593-S.SNP.10:9599999 chr10:009599999 0 W/9599999-9599999 FN2593-S SNP T -> A AC=1;AN=186;BQB=0.197133;DP=3372;DP4=1629,1374,14,15;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.09508e-11;MQSB=0.605806;RPB=0.52646;SGB=26.8957;VDB=0.64068;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.10:9602802 chr10:009602802 0 W/9602802-9602802 FN-248 Single Base Substitution G-T INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN4240-S.SNP.10:9607804 chr10:009607804 0 W/9607804-9607804 FN4240-S SNP C -> A AC=2;AN=170;BQB=0.312956;DP=2156;DP4=1110,912,7,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.72439e-06;MQSB=0.998929;RPB=0.923245;SGB=17.4413;VDB=0.416485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K71N|76|LOC_Os10g18850|protein_coding|CODING|LOC_Os10g18850.1|2|1),SPLICE_SITE_REGION(LOW||||76|LOC_Os10g18850|protein_coding|CODING|LOC_Os10g18850.1|2|1) FN1251-S.SNP.10:9608324 chr10:009608324 0 W/9608324-9608324 FN1251-S Single Base Substitution A-T INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3057-S.SNP.10:9615994 chr10:009615994 0 W/9615994-9615994 FN3057-S SNP A -> G AC=1;AN=184;BQB=0.142185;DP=2655;DP4=1222,1341,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.71575e-07;MQSB=0.988695;RPB=0.890005;SGB=8.32411;VDB=0.332478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.10:9616775 chr10:009616775 0 W/9616775-9616775 FN1673-S SNP T -> C AC=1;AN=188;BQB=0.502198;DP=3685;DP4=1990,1671,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.4761e-06;MQSB=0.958876;RPB=0.770785;SGB=3.99491;VDB=0.583238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F5L|179|LOC_Os10g18870|protein_coding|CODING|LOC_Os10g18870.1|1|1) FN3711-S.SNP.10:9624195 chr10:009624195 0 W/9624195-9624195 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.893245;DP=2735;DP4=1174,1225,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94864e-06;MQSB=0.736458;RPB=0.0802743;SGB=-3.65821;VDB=0.00724193;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.10:9633194 chr10:009633194 0 W/9633194-9633194 FN767-S Single Base Substitution A-G INTRON HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN3288-S.SNP.10:9636249 chr10:009636249 0 W/9636249-9636249 FN3288-S SNP C -> G AC=1;AN=184;BQB=0.980656;DP=2636;DP4=1443,1112,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00758725;MQB=0.000105551;MQSB=0.0875202;RPB=0.999713;SGB=39.699;VDB=0.627244;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.10:9638462 chr10:009638462 0 W/9638462-9638462 FN445-S Single Base Substitution G-C INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2564-S.SNP.10:9641120 chr10:009641120 0 W/9641120-9641120 FN2564-S SNP T -> A AC=1;AN=196;BQB=0.118777;DP=3887;DP4=1959,1586,8,5;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0.00128634;MQB=6.06467e-05;MQSB=0.842604;RPB=0.996558;SGB=-16.2163;VDB=0.073411;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.10:9644226 chr10:009644226 0 W/9644226-9644226 FN1559-S Single Base Substitution A-G INTRON HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN-211.SNP.10:9645935 chr10:009645935 0 W/9645935-9645935 FN-211 Single Base Substitution T-G INTRON HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN355-S.SNP.10:9646528 chr10:009646528 0 W/9646528-9646528 FN355-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g18940 retrotransposon, putative, centromere-specific, expressed SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN1025-S.SNP.10:9646777 chr10:009646777 0 W/9646777-9646777 FN1025-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g18940 retrotransposon, putative, centromere-specific, expressed SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1136-S.SNP.10:9651419 chr10:009651419 0 W/9651419-9651419 FN1136-S Single Base Substitution A-G INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN898-S.SNP.10:9658080 chr10:009658080 0 W/9658080-9658080 FN898-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g18970 retrotransposon protein, putative, unclassified SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2462.SNP.10:9661047 chr10:009661047 0 W/9661047-9661047 FN2462 SNP T -> A AC=1;AN=200;BQB=0.993861;DP=5526;DP4=2700,2409,13,7;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0741947;MQB=0.587149;MQSB=1.90545e-22;RPB=0.952677;SGB=37.3004;VDB=0.467763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.10:9667264 chr10:009667264 0 W/9667264-9667264 FN3610-S SNP T -> A AC=2;AN=190;BQB=0.976553;DP=2978;DP4=1580,1246,20,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49383e-21;MQSB=0.985478;RPB=0.734358;SGB=167.496;VDB=0.306897;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L33*|751|LOC_Os10g18990|protein_coding|CODING|LOC_Os10g18990.1|1|1);LOF=(LOC_Os10g18990|LOC_Os10g18990|1|1.00);NMD=(LOC_Os10g18990|LOC_Os10g18990|1|1.00) FN2095-S.SNP.10:9670463 chr10:009670463 0 W/9670463-9670463 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.00595329;DP=3578;DP4=1787,1747,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04766e-06;MQSB=0.000285634;RPB=0.543444;SGB=-41.2125;VDB=0.61478;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.10:9673060 chr10:009673060 0 W/9673060-9673060 FN484-S Single Base Substitution G-T INTERGENIC HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2358.SNP.10:9673967 chr10:009673967 0 W/9673967-9673967 FN2358 SNP G -> C AC=2;AN=190;BQB=0.922743;DP=4903;DP4=2363,2080,38,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.07721e-28;MQSB=0.895894;RPB=0.968713;SGB=-173.872;VDB=0.433726;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.10:9677356 chr10:009677356 0 W/9677356-9677356 FN1023-S Single Base Substitution A-T INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN2275-S.SNP.10:9679536 chr10:009679536 0 W/9679536-9679536 FN2275-S SNP T -> A AC=1;AN=190;BQB=0.470995;DP=3990;DP4=2144,1377,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62641e-16;MQSB=0.101372;RPB=0.749162;SGB=64.5217;VDB=0.738268;EFF=INTRON(MODIFIER||||609|LOC_Os10g19010|protein_coding|CODING|LOC_Os10g19010.1|2|1) FN2715-S.SNP.10:9679924 chr10:009679924 0 W/9679924-9679924 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.7481;DP=4864;DP4=2328,2247,17,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00102796;MQB=3.48193e-11;MQSB=5.03404e-11;RPB=0.798089;SGB=39.9056;VDB=0.223668;EFF=INTRON(MODIFIER||||609|LOC_Os10g19010|protein_coding|CODING|LOC_Os10g19010.1|2|1) FN3492-S.SNP.10:9689829 chr10:009689829 0 W/9689829-9689829 FN3492-S SNP A -> T AC=1;AN=184;BQB=0.913723;DP=2774;DP4=1357,1306,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.34239e-08;MQSB=0.994051;RPB=0.427956;SGB=48.7425;VDB=0.489788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.10:9694198 chr10:009694198 0 W/9694198-9694198 FN1282-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2749-S.SNP.10:9694365 chr10:009694365 0 W/9694365-9694365 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.303081;DP=3958;DP4=1433,2338,2,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000811449;MQSB=0.934016;RPB=0.628337;SGB=26.6347;VDB=0.559649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.10:9698715 chr10:009698715 0 W/9698715-9698715 FN2665-S SNP T -> C AC=1;AN=200;BQB=0.65995;DP=4885;DP4=2183,2532,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.60438e-16;MQSB=0.996347;RPB=0.357057;SGB=-8.26887;VDB=0.621677;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.10:9698716 chr10:009698716 0 W/9698716-9698716 FN2665-S SNP A -> G AC=1;AN=200;BQB=0.773498;DP=4898;DP4=2198,2506,7,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49838e-14;MQSB=0.998629;RPB=0.217698;SGB=47.7211;VDB=0.432899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.10:9700328 chr10:009700328 0 W/9700328-9700328 FN1519-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g19050 expressed protein SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1182-S.SNP.10:9701916 chr10:009701916 0 W/9701916-9701916 FN1182-S Single Base Substitution C-T INTRON HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN-220.SNP.10:9702246 chr10:009702246 0 W/9702246-9702246 FN-220 Single Base Substitution G-T INTRON HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN-220.SNP.10:9702247 chr10:009702247 0 W/9702247-9702247 FN-220 Single Base Substitution C-T INTRON HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN3578-S.SNP.10:9702552 chr10:009702552 0 W/9702552-9702552 FN3578-S SNP C -> G AC=1;AN=188;BQB=0.998671;DP=3691;DP4=2003,1616,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.01429e-09;MQSB=0.986198;RPB=0.433533;SGB=67.1521;VDB=0.15675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.10:9709582 chr10:009709582 0 W/9709582-9709582 FN2730-S SNP C -> T AC=1;AN=200;BQB=0.180331;DP=4996;DP4=2224,2478,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.46348e-11;MQSB=0.947931;RPB=0.996648;SGB=72.6852;VDB=0.836479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.10:9736295 chr10:009736295 0 W/9736295-9736295 FN1745-S SNP A -> G AC=1;AN=188;BQB=0.0993752;DP=4369;DP4=1939,2391,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.22797;MQB=0.0327344;MQSB=1.331e-36;RPB=0.784694;SGB=-144.43;VDB=0.849484;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D750G|803|LOC_Os10g19120|protein_coding|CODING|LOC_Os10g19120.1|8|1) FN3353-S.SNP.10:9741432 chr10:009741432 0 W/9741432-9741432 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.992809;DP=4618;DP4=2588,1931,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.098744;MQB=0.266469;MQSB=0.418348;RPB=0.6095;SGB=71.3514;VDB=0.175684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A485T|1995|LOC_Os10g19130|protein_coding|CODING|LOC_Os10g19130.1|1|1) FN1467-S.SNP.10:9746421 chr10:009746421 0 W/9746421-9746421 FN1467-S Single Base Substitution A-T INTRON HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN4230-S.SNP.10:9749872 chr10:009749872 0 W/9749872-9749872 FN4230-S SNP A -> G AC=2;AN=170;BQB=0.973639;DP=2401;DP4=1254,1061,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.93798e-17;MQSB=0.98995;RPB=0.94903;SGB=83.0751;VDB=0.885011;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.10:9752778 chr10:009752778 0 W/9752778-9752778 FN1573-S Single Base Substitution A-C INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN769-S.SNP.10:9765241 chr10:009765241 0 W/9765241-9765241 FN769-S Single Base Substitution G-A INTERGENIC HOMO SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN347-S.SNP.10:9766095 chr10:009766095 0 W/9766095-9766095 FN347-S Single Base Substitution T-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN3364-S.SNP.10:9766594 chr10:009766594 0 W/9766594-9766594 FN3364-S SNP C -> T AC=1;AN=182;BQB=0.691133;DP=2945;DP4=1468,1357,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.00016772;MQSB=0.998569;RPB=0.99979;SGB=39.699;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.10:9768741 chr10:009768741 0 W/9768741-9768741 FN3376-S SNP A -> G AC=1;AN=182;BQB=0.867967;DP=3008;DP4=1455,1466,11,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.03329e-11;MQSB=0.986471;RPB=0.307302;SGB=75.8731;VDB=0.360202;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.10:9770613 chr10:009770613 0 W/9770613-9770613 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.497447;DP=4927;DP4=2318,2261,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9324e-16;MQSB=0.936648;RPB=0.982162;SGB=76.3213;VDB=0.577367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.10:9770614 chr10:009770614 0 W/9770614-9770614 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.908763;DP=4919;DP4=2340,2276,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0921e-17;MQSB=0.905884;RPB=0.987475;SGB=25.5416;VDB=0.637211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.10:9777759 chr10:009777759 0 W/9777759-9777759 FN2173-S SNP A -> G AC=2;AN=168;BQB=0.0134516;DP=4088;DP4=2057,1970,24,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.58136e-16;MQSB=0.922726;RPB=0.357085;SGB=-144.307;VDB=0.454626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cCt|L77P|140|LOC_Os10g19190|protein_coding|CODING|LOC_Os10g19190.1|5|1) FN-252.SNP.10:9781919 chr10:009781919 0 W/9781919-9781919 FN-252 Single Base Substitution C-T INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN623-S.SNP.10:9782697 chr10:009782697 0 W/9782697-9782697 FN623-S Single Base Substitution A-G INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1131-S.SNP.10:9785256 chr10:009785256 0 W/9785256-9785256 FN1131-S Single Base Substitution A-T INTERGENIC HET SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN-366.SNP.10:9785387 chr10:009785387 0 W/9785387-9785387 FN-366 Single Base Substitution C-T INTERGENIC HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN1215-S.SNP.10:9785387 chr10:009785387 0 W/9785387-9785387 FN1215-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN968-S.SNP.10:9785387 chr10:009785387 0 W/9785387-9785387 FN968-S Single Base Substitution C-T INTERGENIC HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN2239-S.SNP.10:9789669 chr10:009789669 0 W/9789669-9789669 FN2239-S SNP G -> A AC=2;AN=190;BQB=0.907055;DP=4334;DP4=2200,1846,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48544e-13;MQSB=0.416134;RPB=0.723425;SGB=92.9626;VDB=0.28339;EFF=INTRON(MODIFIER||||411|LOC_Os10g19230|protein_coding|CODING|LOC_Os10g19230.1|1|1) FN4084-S.SNP.10:9796674 chr10:009796674 0 W/9796674-9796674 FN4084-S SNP G -> A AC=1;AN=182;BQB=0.582711;DP=2759;DP4=1261,1420,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=0.00708656;MQSB=0.985815;RPB=0.543757;SGB=57.644;VDB=0.481346;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.10:9797527 chr10:009797527 0 W/9797527-9797527 FN-114 Single Base Substitution C-T INTRON HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN566-S.SNP.10:9797977 chr10:009797977 0 W/9797977-9797977 FN566-S Single Base Substitution A-G INTRON HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2630-S.SNP.10:9798698 chr10:009798698 0 W/9798698-9798698 FN2630-S SNP G -> A AC=1;AN=198;BQB=0.836635;DP=4805;DP4=2123,2403,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.38227e-18;MQSB=0.964625;RPB=0.27949;SGB=123.342;VDB=0.649159;EFF=INTRON(MODIFIER||||226|LOC_Os10g19240|protein_coding|CODING|LOC_Os10g19240.1|1|1) FN3312-S.SNP.10:9802256 chr10:009802256 0 W/9802256-9802256 FN3312-S SNP T -> A AC=1;AN=184;BQB=0.426865;DP=3308;DP4=1656,1521,14,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.73301e-14;MQSB=0.959385;RPB=0.210257;SGB=53.5365;VDB=0.488913;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.10:9806866 chr10:009806866 0 W/9806866-9806866 FN916-S Single Base Substitution G-A INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN4128-S.SNP.10:9823008 chr10:009823008 0 W/9823008-9823008 FN4128-S SNP C -> T AC=1;AN=182;BQB=0.71627;DP=2950;DP4=1581,1305,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00135593;MQB=8.64058e-06;MQSB=0.350979;RPB=0.995021;SGB=48.6223;VDB=0.559446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D164N|536|LOC_Os10g19280|protein_coding|CODING|LOC_Os10g19280.1|1|1) FN2464.SNP.10:9823306 chr10:009823306 0 W/9823306-9823306 FN2464 SNP G -> A AC=2;AN=200;BQB=0.985171;DP=4722;DP4=2254,2177,20,11;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0783566;MQB=0.865384;MQSB=7.81506e-19;RPB=0.761008;SGB=101.557;VDB=0.791149;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D64|536|LOC_Os10g19280|protein_coding|CODING|LOC_Os10g19280.1|1|1) FN2765-S.SNP.10:9823601 chr10:009823601 0 W/9823601-9823601 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.599114;DP=4036;DP4=1870,1940,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0138751;MQB=1.02502e-05;MQSB=0.000107235;RPB=0.87223;SGB=14.1348;VDB=0.799391;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.10:9828687 chr10:009828687 0 W/9828687-9828687 FN-356 Single Base Substitution C-T INTRON HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN2216-S.SNP.10:9831159 chr10:009831159 0 W/9831159-9831159 FN2216-S SNP G -> T AC=1;AN=190;BQB=0.942116;DP=3563;DP4=1997,1272,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.0010333;MQSB=0.00708246;RPB=0.897347;SGB=18.3316;VDB=0.657519;EFF=INTRON(MODIFIER||||220|LOC_Os10g19300|protein_coding|CODING|LOC_Os10g19300.1|3|1) FN4107-S.SNP.10:9834055 chr10:009834055 0 W/9834055-9834055 FN4107-S SNP A -> G AC=1;AN=182;BQB=0.978052;DP=2995;DP4=1562,1368,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.44666e-06;MQSB=0.960256;RPB=0.775177;SGB=35.0899;VDB=0.565813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.10:9839590 chr10:009839590 0 W/9839590-9839590 FN2329 SNP T -> A AC=1;AN=192;BQB=0.892805;DP=4804;DP4=2366,2170,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12381e-13;MQSB=0.747331;RPB=0.557469;SGB=21.4339;VDB=0.743871;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P77|418|LOC_Os10g19310|protein_coding|CODING|LOC_Os10g19310.1|2|1) FN4258-S.SNP.10:9840755 chr10:009840755 0 W/9840755-9840755 FN4258-S SNP G -> T AC=1;AN=170;BQB=0.373993;DP=1891;DP4=1121,709,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000168397;MQSB=0.855703;RPB=0.709915;SGB=10.1134;VDB=0.788314;EFF=INTRON(MODIFIER||||418|LOC_Os10g19310|protein_coding|CODING|LOC_Os10g19310.1|1|1) FN2715-S.SNP.10:9841160 chr10:009841160 0 W/9841160-9841160 FN2715-S SNP T -> C AC=1;AN=198;BQB=0.922649;DP=4596;DP4=2237,2047,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.62516e-09;MQSB=0.681739;RPB=0.992819;SGB=40.2696;VDB=0.490227;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D30G|418|LOC_Os10g19310|protein_coding|CODING|LOC_Os10g19310.1|1|1) FN2572-S.SNP.10:9844900 chr10:009844900 0 W/9844900-9844900 FN2572-S SNP C -> G AC=1;AN=198;BQB=0.997621;DP=3100;DP4=1502,1227,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.88504e-08;MQSB=0.977669;RPB=0.560396;SGB=58.7391;VDB=0.6178;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.10:9846072 chr10:009846072 0 W/9846072-9846072 FN945-S Single Base Substitution C-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN1416-S.SNP.10:9868271 chr10:009868271 0 W/9868271-9868271 FN1416-S Single Base Substitution A-C INTERGENIC HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN260-S.SNP.10:9871060 chr10:009871060 0 W/9871060-9871060 FN260-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g19338 retrotransposon protein, putative, Ty1-copia subclass SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN1519-S.SNP.10:9872516 chr10:009872516 0 W/9872516-9872516 FN1519-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g19338 retrotransposon protein, putative, Ty1-copia subclass SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3343-S.SNP.10:9875606 chr10:009875606 0 W/9875606-9875606 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.709458;DP=2970;DP4=1304,1578,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07023e-05;MQSB=0.964209;RPB=0.990303;SGB=44.2207;VDB=0.792953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.10:9878241 chr10:009878241 0 W/9878241-9878241 FN2473 SNP C -> T AC=2;AN=200;BQB=0.68484;DP=4642;DP4=2214,2077,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.57588e-26;MQSB=0.82357;RPB=0.415224;SGB=51.2243;VDB=0.966201;EFF=INTERGENIC(MODIFIER||||||||||1) FN1416-S.SNP.10:9880055 chr10:009880055 0 W/9880055-9880055 FN1416-S Single Base Substitution G-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1416-S.SNP.10:9880056 chr10:009880056 0 W/9880056-9880056 FN1416-S Single Base Substitution C-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1602-S.SNP.10:9894834 chr10:009894834 0 W/9894834-9894834 FN1602-S Single Base Substitution C-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2562-S.SNP.10:9899038 chr10:009899038 0 W/9899038-9899038 FN2562-S SNP T -> C AC=2;AN=198;BQB=0.386823;DP=3452;DP4=1385,1840,17,31;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000579374;MQB=1.29848e-19;MQSB=6.81762e-16;RPB=0.721273;SGB=214.973;VDB=0.249073;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.10:9920790 chr10:009920790 0 W/9920790-9920790 FN1748-S SNP G -> A AC=2;AN=188;BQB=0.00555942;DP=2797;DP4=1746,996,20,14;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=4.36193e-06;MQSB=0.992805;RPB=0.674508;SGB=-43.7584;VDB=0.255231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.10:9921534 chr10:009921534 0 W/9921534-9921534 FN1499-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g19880 alpha-1,2-fucosidase, putative, expressed SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3287-S.SNP.10:9940966 chr10:009940966 0 W/9940966-9940966 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.34613;DP=2899;DP4=1295,1515,15,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.82629e-09;MQSB=0.999668;RPB=0.992772;SGB=63.9222;VDB=0.723979;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.10:9952050 chr10:009952050 0 W/9952050-9952050 FN1068-S Single Base Substitution C-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2619-S.SNP.10:9955392 chr10:009955392 0 W/9955392-9955392 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.76089;DP=4538;DP4=2288,1985,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.66821e-14;MQSB=0.945039;RPB=0.400935;SGB=52.7004;VDB=0.521862;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.10:9955644 chr10:009955644 0 W/9955644-9955644 FN4305-S SNP G -> A AC=1;AN=170;BQB=0.775338;DP=2507;DP4=1164,1266,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.59565e-07;MQSB=0.99272;RPB=0.997298;SGB=41.7633;VDB=0.790939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.10:9962926 chr10:009962926 0 W/9962926-9962926 FN2719-S SNP C -> A AC=1;AN=198;BQB=0.905534;DP=4447;DP4=2227,1951,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.26095e-08;MQSB=0.932322;RPB=0.890187;SGB=19.0642;VDB=0.965278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.10:9966266 chr10:009966266 0 W/9966266-9966266 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.065274;DP=4632;DP4=2045,2221,16,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18795e-08;MQSB=0.786686;RPB=0.827599;SGB=-11.0065;VDB=0.992165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.10:9972147 chr10:009972147 0 W/9972147-9972147 FN2441 SNP A -> T AC=1;AN=200;BQB=0.0544979;DP=4772;DP4=2287,2221,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.69935e-18;MQSB=0.79722;RPB=0.883908;SGB=155.578;VDB=0.955584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.10:9973230 chr10:009973230 0 W/9973230-9973230 FN1108-S Single Base Substitution T-C INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN-381.SNP.10:9980098 chr10:009980098 0 W/9980098-9980098 FN-381 Single Base Substitution A-G INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2582-S.SNP.10:9980715 chr10:009980715 0 W/9980715-9980715 FN2582-S SNP C -> T AC=1;AN=198;BQB=0.416871;DP=4270;DP4=2188,1885,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234192;MQB=6.07098e-08;MQSB=0.999917;RPB=0.895972;SGB=26.7492;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.10:9986519 chr10:009986519 0 W/9986519-9986519 FN2491 SNP G -> A AC=1;AN=200;BQB=0.403979;DP=4390;DP4=2094,2073,8,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00820046;MQB=0.735157;MQSB=0.00662819;RPB=0.5104;SGB=54.6902;VDB=0.754023;EFF=INTRON(MODIFIER||||134|LOC_Os10g19919|protein_coding|CODING|LOC_Os10g19919.1|1|1),INTRON(MODIFIER||||134|LOC_Os10g19919|protein_coding|CODING|LOC_Os10g19919.4|1|1),INTRON(MODIFIER||||134|LOC_Os10g19919|protein_coding|CODING|LOC_Os10g19919.2|2|1),INTRON(MODIFIER||||134|LOC_Os10g19919|protein_coding|CODING|LOC_Os10g19919.3|2|1) FN955-S.SNP.10:10006203 chr10:010006203 0 W/10006203-10006203 FN955-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-344.SNP.10:10006385 chr10:010006385 0 W/10006385-10006385 FN-344 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g19950 retrotransposon protein, putative, unclassified, expressed SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN1545-S.SNP.10:10006385 chr10:010006385 0 W/10006385-10006385 FN1545-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g19950 retrotransposon protein, putative, unclassified, expressed SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN-218.SNP.10:10007875 chr10:010007875 0 W/10007875-10007875 FN-218 Single Base Substitution C-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1229-S.SNP.10:10009259 chr10:010009259 0 W/10009259-10009259 FN1229-S Single Base Substitution G-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3716-S.SNP.10:10020068 chr10:010020068 0 W/10020068-10020068 FN3716-S SNP A -> T AC=1;AN=190;BQB=0.965506;DP=2495;DP4=1244,1132,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000274797;MQSB=0.749635;RPB=0.919367;SGB=18.3316;VDB=0.49524;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.10:10025496 chr10:010025496 0 W/10025496-10025496 FN3421-S SNP C -> G AC=1;AN=184;BQB=0.943242;DP=2197;DP4=1082,1030,2,15;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.0609923;MQB=0.768056;MQSB=5.45274e-32;RPB=0.849184;SGB=49.835;VDB=0.611754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN1094-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1466-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN1466-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1555-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN1555-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN1568-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN1568-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN2134-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.814963;DP=3750;DP4=1942,1741,16,13;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.161067;MQB=0.608612;MQSB=2.18292e-30;RPB=0.548019;SGB=56.2162;VDB=0.269352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1066I|1785|LOC_Os10g20020|protein_coding|CODING|LOC_Os10g20020.1|3|1) FN2385.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN2385 SNP G -> A AC=2;AN=192;BQB=0.970958;DP=4986;DP4=2381,2237,27,27;HOB=0.0206163;ICB=0.494846;MQ=38;MQ0F=0.0607702;MQB=0.890737;MQSB=0.00443173;RPB=0.759757;SGB=182.354;VDB=0.11157;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1066I|1785|LOC_Os10g20020|protein_coding|CODING|LOC_Os10g20020.1|3|1) FN3523-S.SNP.10:10043080 chr10:010043080 0 W/10043080-10043080 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.972565;DP=3337;DP4=1798,1478,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0982919;MQB=0.826796;MQSB=1.68864e-28;RPB=0.0969514;SGB=35.9843;VDB=0.154473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1066I|1785|LOC_Os10g20020|protein_coding|CODING|LOC_Os10g20020.1|3|1) FN1313-S.SNP.10:10045858 chr10:010045858 0 W/10045858-10045858 FN1313-S Single Base Substitution C-T INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3606-S.SNP.10:10048349 chr10:010048349 0 W/10048349-10048349 FN3606-S SNP G -> A AC=2;AN=190;BQB=0.903357;DP=3205;DP4=1408,1674,14,6;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.232137;MQB=0.962987;MQSB=0;RPB=0.343869;SGB=85.5263;VDB=0.11549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A1040V|1045|LOC_Os10g20030|protein_coding|CODING|LOC_Os10g20030.1|3|1) FN911-S.SNP.10:10050812 chr10:010050812 0 W/10050812-10050812 FN911-S Single Base Substitution G-A INTRON HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN1335-S.SNP.10:10050981 chr10:010050981 0 W/10050981-10050981 FN1335-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3564-S.SNP.10:10072282 chr10:010072282 0 W/10072282-10072282 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.998836;DP=3654;DP4=1883,1706,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.112753;MQB=0.402078;MQSB=4.06531e-35;RPB=0.691653;SGB=67.1521;VDB=0.668172;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.10:10072282 chr10:010072282 0 W/10072282-10072282 FN432-S Single Base Substitution G-A INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN626-S.SNP.10:10072282 chr10:010072282 0 W/10072282-10072282 FN626-S Single Base Substitution G-A INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN558-S.SNP.10:10080894 chr10:010080894 0 W/10080894-10080894 FN558-S Single Base Substitution A-G INTERGENIC HOMO SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2206-S.SNP.10:10082983 chr10:010082983 0 W/10082983-10082983 FN2206-S SNP G -> T AC=1;AN=190;BQB=0.471354;DP=5075;DP4=2701,2072,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20957e-08;MQSB=0.704903;RPB=0.96961;SGB=43.2083;VDB=0.599934;EFF=INTERGENIC(MODIFIER||||||||||1) FN2206-S.SNP.10:10082984 chr10:010082984 0 W/10082984-10082984 FN2206-S SNP A -> T AC=1;AN=190;BQB=0.433544;DP=5078;DP4=2764,2095,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.29487e-10;MQSB=0.891372;RPB=0.933201;SGB=7.21887;VDB=0.768927;EFF=INTERGENIC(MODIFIER||||||||||1) FN-356.SNP.10:10084012 chr10:010084012 0 W/10084012-10084012 FN-356 Single Base Substitution C-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-66.SNP.10:10085587 chr10:010085587 0 W/10085587-10085587 FN-66 Single Base Substitution C-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN691-S.SNP.10:10088681 chr10:010088681 0 W/10088681-10088681 FN691-S Single Base Substitution A-T INTERGENIC HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN-221.SNP.10:10091120 chr10:010091120 0 W/10091120-10091120 FN-221 Single Base Substitution G-A INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN438-S.SNP.10:10091489 chr10:010091489 0 W/10091489-10091489 FN438-S Single Base Substitution A-T INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN-85.SNP.10:10093538 chr10:010093538 0 W/10093538-10093538 FN-85 Single Base Substitution G-A INTRON HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2750-S.SNP.10:10100824 chr10:010100824 0 W/10100824-10100824 FN2750-S SNP T -> C AC=1;AN=200;BQB=0.999265;DP=5202;DP4=2510,2448,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10619e-11;MQSB=0.956041;RPB=0.997519;SGB=104.921;VDB=0.360777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.10:10103431 chr10:010103431 0 W/10103431-10103431 FN2234-S SNP T -> C AC=1;AN=190;BQB=0.957583;DP=5309;DP4=2568,2396,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19279e-10;MQSB=0.550452;RPB=0.640271;SGB=46.7622;VDB=0.60711;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S247|800|LOC_Os10g20120|protein_coding|CODING|LOC_Os10g20120.1|1|1) FN4255-S.SNP.10:10103628 chr10:010103628 0 W/10103628-10103628 FN4255-S SNP A -> G AC=2;AN=170;BQB=0.946746;DP=2997;DP4=1468,1430,15,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.34599e-16;MQSB=0.977783;RPB=0.595351;SGB=93.4031;VDB=0.0635637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S182P|800|LOC_Os10g20120|protein_coding|CODING|LOC_Os10g20120.1|1|1) FN3547-S.SNP.10:10109648 chr10:010109648 0 W/10109648-10109648 FN3547-S SNP G -> A AC=1;AN=188;BQB=0.999517;DP=2558;DP4=1254,1247,5,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.17666e-05;MQSB=0.994856;RPB=0.618805;SGB=26.2637;VDB=0.0317414;EFF=INTRON(MODIFIER||||428|LOC_Os10g20139|protein_coding|CODING|LOC_Os10g20139.1|1|1) FN485-S.SNP.10:10112618 chr10:010112618 0 W/10112618-10112618 FN485-S Single Base Substitution C-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN450-S.SNP.10:10117495 chr10:010117495 0 W/10117495-10117495 FN450-S Single Base Substitution C-T INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN3842-S.SNP.10:10126824 chr10:010126824 0 W/10126824-10126824 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.997751;DP=3287;DP4=1712,1480,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.10588e-10;MQSB=0.968572;RPB=0.794312;SGB=67.3108;VDB=0.591352;EFF=INTRON(MODIFIER||||908|LOC_Os10g20170|protein_coding|CODING|LOC_Os10g20170.1|1|1) CW-631-3-1.SNP.10:10126978 chr10:010126978 0 W/10126978-10126978 CW-631-3-1 Single Base Substitution A-G INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1254-S.SNP.10:10141164 chr10:010141164 0 W/10141164-10141164 FN1254-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3378-S.SNP.10:10150240 chr10:010150240 0 W/10150240-10150240 FN3378-S SNP T -> A AC=2;AN=184;BQB=0.861885;DP=3568;DP4=1774,1530,20,18;HOB=0.0215028;ICB=0.494625;MQ=41;MQ0F=0.0151345;MQB=0.0215103;MQSB=2.72306e-30;RPB=0.911699;SGB=123.793;VDB=0.861138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3576-S.SNP.10:10151355 chr10:010151355 0 W/10151355-10151355 FN3576-S SNP C -> T AC=2;AN=188;BQB=0.977187;DP=3428;DP4=1781,1541,20,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.49546e-21;MQSB=0.980141;RPB=0.0845895;SGB=117.48;VDB=0.646521;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S321|544|LOC_Os10g20220|protein_coding|CODING|LOC_Os10g20220.1|3|1) FN1385-S.SNP.10:10151417 chr10:010151417 0 W/10151417-10151417 FN1385-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g20220 retrotransposon protein, putative, unclassified, expressed SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1170-S.SNP.10:10153228 chr10:010153228 0 W/10153228-10153228 FN1170-S Single Base Substitution G-A INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2263-S.SNP.10:10157346 chr10:010157346 0 W/10157346-10157346 FN2263-S SNP A -> C AC=2;AN=190;BQB=0.999802;DP=5024;DP4=2204,2279,25,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.42395e-24;MQSB=0.950749;RPB=0.950109;SGB=7.27147;VDB=0.651189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.10:10160858 chr10:010160858 0 W/10160858-10160858 FN3857-S SNP C -> T AC=2;AN=158;BQB=0.972421;DP=2179;DP4=1182,907,7,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.26032e-12;MQSB=0.903891;RPB=0.75779;SGB=61.029;VDB=0.89666;EFF=INTERGENIC(MODIFIER||||||||||1) W554-1-1.SNP.10:10176423 chr10:010176423 0 W/10176423-10176423 W554-1-1 Single Base Substitution C-T INTRON HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2488.SNP.10:10178414 chr10:010178414 0 W/10178414-10178414 FN2488 SNP A -> T AC=1;AN=200;BQB=0.869828;DP=4902;DP4=2332,2233,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.3155e-12;MQSB=0.863843;RPB=0.2102;SGB=39.9056;VDB=0.0967745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.10:10179376 chr10:010179376 0 W/10179376-10179376 FN2725-S SNP A -> G AC=2;AN=200;BQB=0.834773;DP=4661;DP4=2362,2059,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21051e-19;MQSB=0.999711;RPB=0.561594;SGB=-44.7915;VDB=0.157936;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.10:10184889 chr10:010184889 0 W/10184889-10184889 FN-212 Single Base Substitution T-C INTRON HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3607-S.SNP.10:10187515 chr10:010187515 0 W/10187515-10187515 FN3607-S SNP C -> T AC=1;AN=190;BQB=0.959039;DP=2544;DP4=1275,1115,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.65572e-10;MQSB=0.965504;RPB=0.911397;SGB=46.7622;VDB=0.17304;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S29|830|LOC_Os10g20260|protein_coding|CODING|LOC_Os10g20260.1|1|1) FN4112-S.SNP.10:10203562 chr10:010203562 0 W/10203562-10203562 FN4112-S SNP A -> G AC=1;AN=182;BQB=0.562619;DP=3047;DP4=1526,1446,4,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.34031e-06;MQSB=0.953844;RPB=0.598439;SGB=53.1331;VDB=0.824937;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.10:10209160 chr10:010209160 0 W/10209160-10209160 FN4183-S SNP C -> A AC=1;AN=170;BQB=0.958951;DP=2271;DP4=1186,1017,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.03303e-07;MQSB=0.981719;RPB=0.711341;SGB=52.3148;VDB=0.649234;EFF=INTRON(MODIFIER||||246|LOC_Os10g20300|protein_coding|CODING|LOC_Os10g20300.1|1|1) FN3968-S.SNP.10:10209304 chr10:010209304 0 W/10209304-10209304 FN3968-S SNP A -> T AC=1;AN=168;BQB=0.865025;DP=2333;DP4=1058,1137,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00900129;MQB=3.73757e-05;MQSB=0.311277;RPB=0.998678;SGB=34.4498;VDB=0.0759488;EFF=INTRON(MODIFIER||||246|LOC_Os10g20300|protein_coding|CODING|LOC_Os10g20300.1|1|1) FN3968-S.SNP.10:10209305 chr10:010209305 0 W/10209305-10209305 FN3968-S SNP T -> G AC=1;AN=168;BQB=0.99236;DP=2337;DP4=1057,1193,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00984168;MQB=1.32514e-05;MQSB=0.116018;RPB=0.995502;SGB=38.8805;VDB=0.0405813;EFF=INTRON(MODIFIER||||246|LOC_Os10g20300|protein_coding|CODING|LOC_Os10g20300.1|1|1) FN543-S.SNP.10:10211551 chr10:010211551 0 W/10211551-10211551 FN543-S Single Base Substitution G-A INTERGENIC HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN-59.SNP.10:10222030 chr10:010222030 0 W/10222030-10222030 FN-59 Single Base Substitution G-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN4090-S.SNP.10:10227234 chr10:010227234 0 W/10227234-10227234 FN4090-S SNP A -> T AC=1;AN=182;BQB=0.915716;DP=2937;DP4=1365,1451,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.07755e-11;MQSB=0.998942;RPB=0.994109;SGB=49.6712;VDB=0.131671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tTt|Y173F|309|LOC_Os10g20330|protein_coding|CODING|LOC_Os10g20330.1|1|1) FN498-S.SNP.10:10235842 chr10:010235842 0 W/10235842-10235842 FN498-S Single Base Substitution C-T INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2691-S.SNP.10:10238505 chr10:010238505 0 W/10238505-10238505 FN2691-S SNP T -> A AC=2;AN=198;BQB=0.872907;DP=4668;DP4=2142,2231,29,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.72576e-28;MQSB=0.653415;RPB=0.385119;SGB=120.666;VDB=0.163855;EFF=INTRON(MODIFIER||||234|LOC_Os10g20360|protein_coding|CODING|LOC_Os10g20360.1|1|1) FN2112-S.SNP.10:10240124 chr10:010240124 0 W/10240124-10240124 FN2112-S SNP T -> C AC=1;AN=168;BQB=0.0298989;DP=3331;DP4=1629,1654,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.8082e-10;MQSB=0.988853;RPB=0.811966;SGB=-74.3449;VDB=0.248669;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.10:10241115 chr10:010241115 0 W/10241115-10241115 FN224-S Single Base Substitution T-G INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN977-S.SNP.10:10249990 chr10:010249990 0 W/10249990-10249990 FN977-S Single Base Substitution C-T INTRON HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN_N1-151-7.SNP.10:10263497 chr10:010263497 0 W/10263497-10263497 FN_N1-151-7 Single Base Substitution T-C HET LOC_Os10g20410 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2629-S.SNP.10:10264155 chr10:010264155 0 W/10264155-10264155 FN2629-S SNP G -> A AC=1;AN=198;BQB=0.617222;DP=4798;DP4=2309,2274,18,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00020842;MQB=5.24413e-18;MQSB=0.922623;RPB=0.611933;SGB=68.5625;VDB=0.765572;EFF=INTRON(MODIFIER||||680|LOC_Os10g20410|protein_coding|CODING|LOC_Os10g20410.1|6|1) FN1426-S.SNP.10:10264569 chr10:010264569 0 W/10264569-10264569 FN1426-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g20410 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1050-S.SNP.10:10268167 chr10:010268167 0 W/10268167-10268167 FN1050-S Single Base Substitution C-G INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN-115.SNP.10:10269288 chr10:010269288 0 W/10269288-10269288 FN-115 Single Base Substitution C-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1307-S.SNP.10:10269288 chr10:010269288 0 W/10269288-10269288 FN1307-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN3446-S.SNP.10:10270050 chr10:010270050 0 W/10270050-10270050 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.8792;DP=3537;DP4=1907,1518,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.73321e-09;MQSB=0.847742;RPB=0.976649;SGB=71.3514;VDB=0.168017;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.10:10274929 chr10:010274929 0 W/10274929-10274929 FN3480-S SNP G -> A AC=2;AN=184;BQB=0.955069;DP=2757;DP4=1327,1310,20,13;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00145085;MQB=5.94979e-16;MQSB=0.291203;RPB=0.894329;SGB=143.7;VDB=0.156855;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P351L|1004|LOC_Os10g20430|protein_coding|CODING|LOC_Os10g20430.1|3|1) FN1240-S.SNP.10:10281223 chr10:010281223 0 W/10281223-10281223 FN1240-S Single Base Substitution A-G INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2530-S.SNP.10:10282296 chr10:010282296 0 W/10282296-10282296 FN2530-S SNP C -> T AC=1;AN=196;BQB=0.988276;DP=4049;DP4=2057,1823,10,11;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0.000246975;MQB=4.1734e-13;MQSB=0.971346;RPB=0.973542;SGB=90.9049;VDB=0.762147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.10:10294928 chr10:010294928 0 W/10294928-10294928 FN3309-S SNP T -> G AC=2;AN=184;BQB=0.962656;DP=2606;DP4=1064,1396,14,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.63562e-14;MQSB=0.997295;RPB=0.978456;SGB=125.613;VDB=0.86705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S362R|477|LOC_Os10g20450|protein_coding|CODING|LOC_Os10g20450.1|5|1) FN-101.SNP.10:10298295 chr10:010298295 0 W/10298295-10298295 FN-101 Single Base Substitution A-T INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-115.SNP.10:10305316 chr10:010305316 0 W/10305316-10305316 FN-115 Single Base Substitution C-T INTERGENIC HOMO SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1422-S.SNP.10:10306550 chr10:010306550 0 W/10306550-10306550 FN1422-S Single Base Substitution G-T INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3308-S.SNP.10:10320087 chr10:010320087 0 W/10320087-10320087 FN3308-S SNP G -> A AC=2;AN=184;BQB=0.999834;DP=2077;DP4=866,1154,5,12;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0;MQB=0.233504;MQSB=0.955701;RPB=0.258923;SGB=71.3514;VDB=1.04801e-05;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P85S|162|LOC_Os10g20480|protein_coding|CODING|LOC_Os10g20480.3|1|1),INTRON(MODIFIER||||670|LOC_Os10g20480|protein_coding|CODING|LOC_Os10g20480.1|2|1),INTRON(MODIFIER||||600|LOC_Os10g20480|protein_coding|CODING|LOC_Os10g20480.2|2|1) FN-283.SNP.10:10322625 chr10:010322625 0 W/10322625-10322625 FN-283 Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1112-S.SNP.10:10329795 chr10:010329795 0 W/10329795-10329795 FN1112-S Single Base Substitution T-C INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN705-S.SNP.10:10329901 chr10:010329901 0 W/10329901-10329901 FN705-S Single Base Substitution C-A INTERGENIC HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN2361.SNP.10:10330002 chr10:010330002 0 W/10330002-10330002 FN2361 SNP A -> G AC=1;AN=192;BQB=0.712262;DP=4510;DP4=2116,1832,15,18;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.09483e-09;MQSB=0.90914;RPB=0.264067;SGB=32.3844;VDB=0.502415;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D240|261|LOC_Os10g20500|protein_coding|CODING|LOC_Os10g20500.1|2|1) FN3679-S.SNP.10:10345256 chr10:010345256 0 W/10345256-10345256 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.988402;DP=2813;DP4=1373,1316,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.606e-12;MQSB=0.834595;RPB=0.321093;SGB=94.6341;VDB=0.554329;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.10:10351588 chr10:010351588 0 W/10351588-10351588 W464-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN483-S.SNP.10:10354841 chr10:010354841 0 W/10354841-10354841 FN483-S Single Base Substitution A-G INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN3434-S.SNP.10:10360665 chr10:010360665 0 W/10360665-10360665 FN3434-S SNP A -> G AC=1;AN=184;BQB=0.999846;DP=2692;DP4=1248,1278,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.57958e-06;MQSB=0.999972;RPB=0.824403;SGB=28.7043;VDB=0.0463984;EFF=INTRON(MODIFIER||||89|LOC_Os10g20560|protein_coding|CODING|LOC_Os10g20560.1|1|1) FN-265.SNP.10:10363563 chr10:010363563 0 W/10363563-10363563 FN-265 Single Base Substitution G-C INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN738-S.SNP.10:10366446 chr10:010366446 0 W/10366446-10366446 FN738-S Single Base Substitution A-T INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN2655-S.SNP.10:10367115 chr10:010367115 0 W/10367115-10367115 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.996722;DP=4701;DP4=2323,2089,18,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00148904;MQB=1.31099e-14;MQSB=0.684004;RPB=0.210864;SGB=68.5625;VDB=0.735206;EFF=INTRON(MODIFIER||||1109|LOC_Os10g20570|protein_coding|CODING|LOC_Os10g20570.1|3|1) FN1753-S.SNP.10:10369288 chr10:010369288 0 W/10369288-10369288 FN1753-S SNP G -> A AC=1;AN=188;BQB=0.768397;DP=2717;DP4=1312,1380,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000301366;MQSB=0.547771;RPB=0.0388697;SGB=2.45162;VDB=0.754356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P425L|1109|LOC_Os10g20570|protein_coding|CODING|LOC_Os10g20570.1|2|1) FN2196-S.SNP.10:10391657 chr10:010391657 0 W/10391657-10391657 FN2196-S SNP T -> A AC=1;AN=190;BQB=0.679782;DP=4044;DP4=2220,1516,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30151e-13;MQSB=0.0959563;RPB=0.125482;SGB=99.1879;VDB=0.460722;EFF=INTRON(MODIFIER||||599|LOC_Os10g20610|protein_coding|CODING|LOC_Os10g20610.1|5|1) FN2128-S.SNP.10:10393832 chr10:010393832 0 W/10393832-10393832 FN2128-S SNP C -> T AC=1;AN=168;BQB=0.944423;DP=2844;DP4=1752,1056,16,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47065e-13;MQSB=0.996353;RPB=0.19856;SGB=86.2102;VDB=0.157056;EFF=INTRON(MODIFIER||||599|LOC_Os10g20610|protein_coding|CODING|LOC_Os10g20610.1|4|1) FN497-S.SNP.10:10417002 chr10:010417002 0 W/10417002-10417002 FN497-S Single Base Substitution T-C INTRON HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN302-S.SNP.10:10418109 chr10:010418109 0 W/10418109-10418109 FN302-S Single Base Substitution G-A INTRON HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-68.SNP.10:10419600 chr10:010419600 0 W/10419600-10419600 FN-68 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2231-S.SNP.10:10419920 chr10:010419920 0 W/10419920-10419920 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.907843;DP=4046;DP4=1794,1981,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000494315;MQB=0.00412615;MQSB=0.810463;RPB=0.550757;SGB=5.78296;VDB=0.421959;EFF=INTERGENIC(MODIFIER||||||||||1) FN2218-S.SNP.10:10420633 chr10:010420633 0 W/10420633-10420633 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.0109275;DP=3763;DP4=1423,1853,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.000265745;MQB=0.00950789;MQSB=1.20873e-09;RPB=0.982117;SGB=80.9724;VDB=0.827319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.10:10422605 chr10:010422605 0 W/10422605-10422605 FN2273-S SNP C -> T AC=2;AN=190;BQB=0.958512;DP=4135;DP4=1446,2332,14,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.98648e-20;MQSB=0.135082;RPB=0.800702;SGB=97.7221;VDB=0.187374;EFF=INTERGENIC(MODIFIER||||||||||1) FN-40.SNP.10:10423502 chr10:010423502 0 W/10423502-10423502 FN-40 Single Base Substitution A-C INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN939-S.SNP.10:10426270 chr10:010426270 0 W/10426270-10426270 FN939-S Single Base Substitution T-A INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN3656-S.SNP.10:10433974 chr10:010433974 0 W/10433974-10433974 FN3656-S SNP G -> A AC=1;AN=190;BQB=0.398528;DP=2408;DP4=1248,1046,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8726e-05;MQSB=0.804107;RPB=0.329272;SGB=32.5467;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN974-S.SNP.10:10437264 chr10:010437264 0 W/10437264-10437264 FN974-S Single Base Substitution C-A INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN3992-S.SNP.10:10437348 chr10:010437348 0 W/10437348-10437348 FN3992-S SNP G -> T AC=1;AN=168;BQB=0.951907;DP=2749;DP4=1503,1117,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.102947;MQB=0.201432;MQSB=5.32993e-16;RPB=0.999555;SGB=38.8805;VDB=0.201801;EFF=INTERGENIC(MODIFIER||||||||||1) FN4149-S.SNP.10:10440577 chr10:010440577 0 W/10440577-10440577 FN4149-S SNP C -> A AC=2;AN=170;BQB=0.869118;DP=2363;DP4=1108,1184,7,11;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00846382;MQB=3.99149e-08;MQSB=0.160037;RPB=0.624756;SGB=74.528;VDB=0.99884;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S275|1267|LOC_Os10g20660|protein_coding|CODING|LOC_Os10g20660.1|1|1) FN2555-S.SNP.10:10441457 chr10:010441457 0 W/10441457-10441457 FN2555-S SNP T -> G AC=1;AN=196;BQB=0.642436;DP=3908;DP4=2000,1721,14,10;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=2.78524e-11;MQSB=0.327542;RPB=0.974104;SGB=-38.26;VDB=0.0445764;EFF=INTRON(MODIFIER||||1267|LOC_Os10g20660|protein_coding|CODING|LOC_Os10g20660.1|1|1) FN691-S.SNP.10:10449091 chr10:010449091 0 W/10449091-10449091 FN691-S Single Base Substitution T-G INTRON HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN3388-S.SNP.10:10450819 chr10:010450819 0 W/10450819-10450819 FN3388-S SNP A -> G AC=1;AN=184;BQB=0.99961;DP=3032;DP4=1328,1463,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33162e-10;MQSB=0.99809;RPB=0.671542;SGB=35.884;VDB=0.144005;EFF=INTRON(MODIFIER||||343|LOC_Os10g20670|protein_coding|CODING|LOC_Os10g20670.1|3|1) FN-219.SNP.10:10450938 chr10:010450938 0 W/10450938-10450938 FN-219 Single Base Substitution C-T INTRON HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1389-S.SNP.10:10455174 chr10:010455174 0 W/10455174-10455174 FN1389-S Single Base Substitution C-A INTERGENIC Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN276-S.SNP.10:10456858 chr10:010456858 0 W/10456858-10456858 FN276-S Single Base Substitution G-A INTERGENIC HET SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN3943-S.SNP.10:10463370 chr10:010463370 0 W/10463370-10463370 FN3943-S SNP G -> A AC=1;AN=168;BQB=0.999906;DP=2884;DP4=1304,1460,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.25746e-06;MQSB=0.963937;RPB=0.762776;SGB=52.1728;VDB=0.324603;EFF=INTERGENIC(MODIFIER||||||||||1) FN-15.SNP.10:10473553 chr10:010473553 0 W/10473553-10473553 FN-15 Single Base Substitution A-T INTERGENIC Homo SNo: 15, Mutant_ID: FN-15, Generation: M2, Mutations: 30, Genes: 79, Seed availability: Yes. FN1357-S.SNP.10:10477148 chr10:010477148 0 W/10477148-10477148 FN1357-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN3955-S.SNP.10:10480268 chr10:010480268 0 W/10480268-10480268 FN3955-S SNP T -> G AC=2;AN=168;BQB=0.4809;DP=2602;DP4=1330,1128,12,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.79745e-15;MQSB=0.640162;RPB=0.0134853;SGB=21.3605;VDB=0.272917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.10:10480272 chr10:010480272 0 W/10480272-10480272 FN3955-S SNP T -> C AC=2;AN=168;BQB=0.990103;DP=2603;DP4=1315,1133,11,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.59509e-16;MQSB=0.812862;RPB=0.0143471;SGB=75.9177;VDB=0.0599029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.10:10485415 chr10:010485415 0 W/10485415-10485415 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.833664;DP=3673;DP4=1854,1522,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.25448e-06;MQSB=0.925852;RPB=0.351055;SGB=40.3588;VDB=0.294276;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V174|849|LOC_Os10g20710|protein_coding|CODING|LOC_Os10g20710.1|1|1) FN3326-S.SNP.10:10486704 chr10:010486704 0 W/10486704-10486704 FN3326-S SNP A -> G AC=1;AN=184;BQB=0.47323;DP=2747;DP4=1332,1304,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29819e-07;MQSB=0.833076;RPB=0.728827;SGB=71.3514;VDB=0.385941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3507-S.SNP.10:10490396 chr10:010490396 0 W/10490396-10490396 FN3507-S SNP G -> A AC=1;AN=188;BQB=0.970763;DP=2891;DP4=1317,1466,9,2;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.000345901;MQB=0.000170275;MQSB=0.000213625;RPB=0.120764;SGB=28.8977;VDB=0.0460102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.10:10494017 chr10:010494017 0 W/10494017-10494017 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.97939;DP=3000;DP4=1329,1585,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=4.31541e-08;MQSB=0.529545;RPB=0.926159;SGB=57.786;VDB=0.419688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.10:10500755 chr10:010500755 0 W/10500755-10500755 FN1176-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1463-S.SNP.10:10508642 chr10:010508642 0 W/10508642-10508642 FN1463-S Single Base Substitution C-T INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN_N1-26-1.SNP.10:10509471 chr10:010509471 0 W/10509471-10509471 FN_N1-26-1 Single Base Substitution A-G Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN778-S.SNP.10:10510231 chr10:010510231 0 W/10510231-10510231 FN778-S Single Base Substitution T-A INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2542-S.SNP.10:10511969 chr10:010511969 0 W/10511969-10511969 FN2542-S SNP G -> A AC=1;AN=196;BQB=0.987167;DP=4278;DP4=1940,2111,12,15;HOB=5.20616e-05;ICB=0.000104654;MQ=43;MQ0F=0.00280505;MQB=2.22484e-09;MQSB=0.307485;RPB=0.869017;SGB=55.2955;VDB=0.521221;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R31*|79|LOC_Os10g20740|protein_coding|CODING|LOC_Os10g20740.1|2|1) FN2645-S.SNP.10:10512359 chr10:010512359 0 W/10512359-10512359 FN2645-S SNP T -> C AC=1;AN=200;BQB=0.587157;DP=4596;DP4=2301,2117,15,8;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00195822;MQB=5.42856e-07;MQSB=0.999713;RPB=0.894126;SGB=100.316;VDB=0.471944;EFF=INTRON(MODIFIER||||79|LOC_Os10g20740|protein_coding|CODING|LOC_Os10g20740.1|1|1) FN2621-S.SNP.10:10513135 chr10:010513135 0 W/10513135-10513135 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.802992;DP=4377;DP4=2217,1923,17,18;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0;MQB=3.94933e-05;MQSB=0.0135642;RPB=0.934708;SGB=115.978;VDB=0.802548;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.10:10513723 chr10:010513723 0 W/10513723-10513723 FN3851-S SNP A -> G AC=1;AN=158;BQB=0.495596;DP=2347;DP4=1166,1106,5,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04082e-09;MQSB=0.765778;RPB=0.994121;SGB=33.2965;VDB=0.300594;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.10:10514701 chr10:010514701 0 W/10514701-10514701 FN-304 Single Base Substitution C-T STOP_GAINED HET LOC_Os10g20750 retrotransposon protein, putative, unclassified, expressed SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN-335.SNP.10:10517083 chr10:010517083 0 W/10517083-10517083 FN-335 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g20750 retrotransposon protein, putative, unclassified, expressed SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN772-S.SNP.10:10517702 chr10:010517702 0 W/10517702-10517702 FN772-S Single Base Substitution G-A INTRON HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3708-S.SNP.10:10551275 chr10:010551275 0 W/10551275-10551275 FN3708-S SNP T -> A AC=1;AN=190;BQB=0.989575;DP=2704;DP4=1223,1382,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0214497;MQB=0.000780594;MQSB=3.03413e-07;RPB=0.95048;SGB=39.9877;VDB=0.788315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.10:10556292 chr10:010556292 0 W/10556292-10556292 FN1658-S SNP T -> A AC=2;AN=188;BQB=0.706869;DP=3265;DP4=1767,1454,16,14;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=3.57038e-09;MQSB=0.0866067;RPB=0.774319;SGB=130.758;VDB=0.709369;EFF=INTRON(MODIFIER||||638|LOC_Os10g20810|protein_coding|CODING|LOC_Os10g20810.1|5|1) FN780-S.SNP.10:10556974 chr10:010556974 0 W/10556974-10556974 FN780-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3563-S.SNP.10:10562287 chr10:010562287 0 W/10562287-10562287 FN3563-S SNP G -> A AC=1;AN=188;BQB=0.610028;DP=2562;DP4=1149,1321,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00107012;MQSB=0.970856;RPB=0.341354;SGB=62.6088;VDB=0.976417;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.10:10562304 chr10:010562304 0 W/10562304-10562304 FN-234 Single Base Substitution T-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN2278-S.SNP.10:10564467 chr10:010564467 0 W/10564467-10564467 FN2278-S SNP G -> A AC=2;AN=190;BQB=0.905513;DP=4851;DP4=2102,2389,24,33;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.08596e-19;MQSB=2.1589e-06;RPB=0.52185;SGB=130.923;VDB=0.919522;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.10:10571513 chr10:010571513 0 W/10571513-10571513 FN809-S Single Base Substitution A-T INTRON HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3285-S.SNP.10:10582693 chr10:010582693 0 W/10582693-10582693 FN3285-S SNP C -> G AC=1;AN=184;BQB=0.922913;DP=2482;DP4=1210,1183,9,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.44136e-13;MQSB=0.724992;RPB=0.0574076;SGB=78.0093;VDB=0.250608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.10:10589943 chr10:010589943 0 W/10589943-10589943 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.945649;DP=2514;DP4=1287,1122,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.97092e-06;MQSB=0.980053;RPB=0.512616;SGB=27.3346;VDB=0.497961;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.10:10595825 chr10:010595825 0 W/10595825-10595825 FN739-S Single Base Substitution A-G INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. W464-2-1.SNP.10:10598027 chr10:010598027 0 W/10598027-10598027 W464-2-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g20930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-262.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN-262 Single Base Substitution G-T INTRON HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1279-S.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN1279-S Single Base Substitution G-T INTRON HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1669-S.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN1669-S SNP G -> T AC=2;AN=188;BQB=0.436215;DP=1001;DP4=470,494,5,5;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=0.0191026;MQSB=0.196899;RPB=0.333814;SGB=10.8165;VDB=0.945331;EFF=INTRON(MODIFIER||||561|LOC_Os10g20930|protein_coding|CODING|LOC_Os10g20930.1|1|1) FN3095-S.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN3095-S SNP G -> T AC=2;AN=184;BQB=0.63523;DP=3445;DP4=1773,1559,12,22;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=3.44211e-19;MQSB=0.906362;RPB=0.991823;SGB=148.222;VDB=0.82481;EFF=INTRON(MODIFIER||||561|LOC_Os10g20930|protein_coding|CODING|LOC_Os10g20930.1|1|1) FN3455-S.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN3455-S SNP G -> T AC=2;AN=184;BQB=0.978522;DP=3532;DP4=1760,1654,16,11;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.51116e-17;MQSB=0.999939;RPB=0.692961;SGB=116.569;VDB=0.968403;EFF=INTRON(MODIFIER||||561|LOC_Os10g20930|protein_coding|CODING|LOC_Os10g20930.1|1|1) FN4130-S.SNP.10:10600041 chr10:010600041 0 W/10600041-10600041 FN4130-S SNP G -> T AC=1;AN=182;BQB=0.280969;DP=2966;DP4=1613,1270,12,7;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=2.80339e-10;MQSB=0.966359;RPB=0.358734;SGB=80.1982;VDB=0.866644;EFF=INTRON(MODIFIER||||561|LOC_Os10g20930|protein_coding|CODING|LOC_Os10g20930.1|1|1) FN3698-S.SNP.10:10613576 chr10:010613576 0 W/10613576-10613576 FN3698-S SNP G -> T AC=1;AN=190;BQB=0.762242;DP=3154;DP4=1735,1291,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000317058;MQB=7.19787e-09;MQSB=0.964056;RPB=0.120275;SGB=80.9724;VDB=0.476625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1323L|1392|LOC_Os10g20960|protein_coding|CODING|LOC_Os10g20960.1|8|1) FN1485-S.SNP.10:10613982 chr10:010613982 0 W/10613982-10613982 FN1485-S Single Base Substitution A-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN887-S.SNP.10:10614113 chr10:010614113 0 W/10614113-10614113 FN887-S Single Base Substitution T-A INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN3917-S.SNP.10:10615797 chr10:010615797 0 W/10615797-10615797 FN3917-S SNP G -> A AC=1;AN=158;BQB=0.88564;DP=1875;DP4=682,1137,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.86919e-06;MQSB=0.554361;RPB=0.24574;SGB=33.9591;VDB=0.435726;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S96|859|LOC_Os10g20970|protein_coding|CODING|LOC_Os10g20970.1|2|1) FN3751-S.SNP.10:10618123 chr10:010618123 0 W/10618123-10618123 FN3751-S SNP A -> G AC=1;AN=190;BQB=0.998242;DP=2799;DP4=1322,1360,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00178635;MQB=0.000362362;MQSB=0.643447;RPB=0.944385;SGB=32.5467;VDB=0.629855;EFF=INTRON(MODIFIER||||859|LOC_Os10g20970|protein_coding|CODING|LOC_Os10g20970.1|4|1) FN3566-S.SNP.10:10620143 chr10:010620143 0 W/10620143-10620143 FN3566-S SNP A -> T AC=1;AN=188;BQB=0.719137;DP=2553;DP4=1043,1443,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.55497e-06;MQSB=0.824979;RPB=0.815478;SGB=15.903;VDB=0.265917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.10:10620733 chr10:010620733 0 W/10620733-10620733 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.177186;DP=3277;DP4=1454,1550,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.47623e-06;MQSB=0.0661555;RPB=0.752025;SGB=68.91;VDB=0.880738;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.10:10620776 chr10:010620776 0 W/10620776-10620776 FN4147-S SNP C -> T AC=1;AN=170;BQB=0.941461;DP=2015;DP4=1243,713,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.000179729;MQSB=0.0505625;RPB=0.516891;SGB=30.1021;VDB=0.519034;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.10:10625100 chr10:010625100 0 W/10625100-10625100 FN320-S Single Base Substitution C-T INTRON HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN3594-S.SNP.10:10626534 chr10:010626534 0 W/10626534-10626534 FN3594-S SNP T -> A AC=2;AN=188;BQB=0.992009;DP=3701;DP4=1150,2291,11,25;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=8.13501e-23;MQSB=1.69233e-09;RPB=0.983917;SGB=76.9421;VDB=0.114818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I354F|561|LOC_Os10g20990|protein_coding|CODING|LOC_Os10g20990.1|7|1) FN3594-S.SNP.10:10626535 chr10:010626535 0 W/10626535-10626535 FN3594-S SNP T -> A AC=2;AN=188;BQB=0.636572;DP=3700;DP4=1163,2323,11,24;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.04857e-22;MQSB=1.01813e-10;RPB=0.960086;SGB=113.937;VDB=0.118657;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K353N|561|LOC_Os10g20990|protein_coding|CODING|LOC_Os10g20990.1|7|1) FN3594-S.SNP.10:10626540 chr10:010626540 0 W/10626540-10626540 FN3594-S SNP T -> A AC=2;AN=188;BQB=0.3342;DP=3728;DP4=1178,2385,11,23;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.19122e-18;MQSB=2.86789e-12;RPB=0.967428;SGB=148.931;VDB=0.377416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I352L|561|LOC_Os10g20990|protein_coding|CODING|LOC_Os10g20990.1|7|1) FN1528-S.SNP.10:10630484 chr10:010630484 0 W/10630484-10630484 FN1528-S Single Base Substitution C-T INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1076-S.SNP.10:10638516 chr10:010638516 0 W/10638516-10638516 FN1076-S Single Base Substitution A-G INTRON HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2134-S.SNP.10:10646547 chr10:010646547 0 W/10646547-10646547 FN2134-S SNP A -> T AC=1;AN=168;BQB=0.975336;DP=1649;DP4=869,721,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0;MQB=0.0055253;MQSB=0.700073;RPB=0.898042;SGB=45.0404;VDB=0.844875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.10:10651041 chr10:010651041 0 W/10651041-10651041 FN1221-S Single Base Substitution A-G INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN3690-S.SNP.10:10655951 chr10:010655951 0 W/10655951-10655951 FN3690-S SNP T -> A AC=2;AN=190;BQB=0.836023;DP=3274;DP4=1772,1334,10,13;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0;MQB=6.74718e-06;MQSB=1.89925e-16;RPB=0.773916;SGB=71.6393;VDB=0.907753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.10:10663320 chr10:010663320 0 W/10663320-10663320 FN2223-S SNP T -> A AC=1;AN=190;BQB=0.96339;DP=4426;DP4=2017,1937,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.85951e-08;MQSB=0.566013;RPB=0.535386;SGB=36.1006;VDB=0.17733;EFF=INTRON(MODIFIER||||253|LOC_Os10g21050|protein_coding|CODING|LOC_Os10g21050.1|1|1) FN3696-S.SNP.10:10672185 chr10:010672185 0 W/10672185-10672185 FN3696-S SNP G -> A AC=2;AN=190;BQB=0.791446;DP=2858;DP4=1553,1180,15,11;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.000349895;MQB=0.103796;MQSB=9.42387e-41;RPB=0.989691;SGB=21.2038;VDB=0.738673;EFF=INTRON(MODIFIER||||1701|LOC_Os10g21070|protein_coding|CODING|LOC_Os10g21070.1|6|1) FN1682-S.SNP.10:10682534 chr10:010682534 0 W/10682534-10682534 FN1682-S SNP A -> T AC=1;AN=188;BQB=0.998561;DP=3581;DP4=1743,1808,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.45713e-10;MQSB=0.950592;RPB=0.275295;SGB=57.244;VDB=0.0397894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.10:10683628 chr10:010683628 0 W/10683628-10683628 FN2284 SNP C -> G AC=1;AN=192;BQB=0.992384;DP=4627;DP4=1948,2326,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.69206e-10;MQSB=0.863159;RPB=0.702124;SGB=41.7357;VDB=0.00156557;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.10:10688553 chr10:010688553 0 W/10688553-10688553 FN985-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g21080 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN673-S.SNP.10:10695854 chr10:010695854 0 W/10695854-10695854 FN673-S Single Base Substitution T-G INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN3698-S.SNP.10:10700491 chr10:010700491 0 W/10700491-10700491 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.939498;DP=2503;DP4=1261,1152,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10027e-06;MQSB=0.998323;RPB=0.917616;SGB=39.9877;VDB=0.956308;EFF=INTRON(MODIFIER||||664|LOC_Os10g21090|protein_coding|CODING|LOC_Os10g21090.1|2|1) FN1093-S.SNP.10:10702789 chr10:010702789 0 W/10702789-10702789 FN1093-S Single Base Substitution A-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1093-S.SNP.10:10702790 chr10:010702790 0 W/10702790-10702790 FN1093-S Single Base Substitution C-T INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1276-S.SNP.10:10714027 chr10:010714027 0 W/10714027-10714027 FN1276-S Single Base Substitution T-C INTRON HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN4230-S.SNP.10:10719407 chr10:010719407 0 W/10719407-10719407 FN4230-S SNP G -> T AC=1;AN=170;BQB=0.941511;DP=2267;DP4=915,1250,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=1.32682e-05;MQSB=0.915988;RPB=0.965773;SGB=17.6652;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.10:10721156 chr10:010721156 0 W/10721156-10721156 FN3490-S SNP T -> A AC=1;AN=184;BQB=0.688986;DP=2635;DP4=1274,1303,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000112601;MQSB=0.0917194;RPB=0.0442452;SGB=32.2261;VDB=0.105328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.10:10721180 chr10:010721180 0 W/10721180-10721180 FN2134-S SNP A -> G AC=1;AN=168;BQB=0.835037;DP=3138;DP4=1595,1508,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.86162e-10;MQSB=0.98881;RPB=0.406235;SGB=22.7913;VDB=0.499469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.10:10730043 chr10:010730043 0 W/10730043-10730043 FN1120-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g21110 glycosyl hydrolase family 10 protein, putative, expressed SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1295-S.SNP.10:10733040 chr10:010733040 0 W/10733040-10733040 FN1295-S Single Base Substitution T-C INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN4108-S.SNP.10:10733755 chr10:010733755 0 W/10733755-10733755 FN4108-S SNP A -> T AC=1;AN=182;BQB=0.938535;DP=3015;DP4=1430,1533,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.71275e-06;MQSB=0.803068;RPB=0.630117;SGB=44.1115;VDB=0.0538447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:10738902 chr10:010738902 0 W/10738902-10738902 FN2572-S SNP A -> T AC=1;AN=198;BQB=0.469314;DP=4116;DP4=2212,1491,21,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.93261e-14;MQSB=0.0322062;RPB=0.99925;SGB=42.8469;VDB=0.320705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:10738902 chr10:010738902 0 W/10738902-10738902 FN2572-S Single Base Substitution A-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2572-S.SNP.10:10739128 chr10:010739128 0 W/10739128-10739128 FN2572-S SNP C -> T AC=1;AN=198;BQB=0.0776499;DP=4060;DP4=1772,2042,16,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.20531e-11;MQSB=0.486296;RPB=0.315334;SGB=122.837;VDB=0.263476;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:10739128 chr10:010739128 0 W/10739128-10739128 FN2572-S Single Base Substitution C-T INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2421.SNP.10:10742655 chr10:010742655 0 W/10742655-10742655 FN2421 SNP A -> G AC=1;AN=200;BQB=0.0652428;DP=5052;DP4=2397,2375,13,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00158353;MQB=1.27464e-05;MQSB=7.42005e-05;RPB=0.26509;SGB=12.7003;VDB=0.514892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.10:10742935 chr10:010742935 0 W/10742935-10742935 FN1422-S Single Base Substitution C-T INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1254-S.SNP.10:10743214 chr10:010743214 0 W/10743214-10743214 FN1254-S Single Base Substitution G-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN2580-S.SNP.10:10744056 chr10:010744056 0 W/10744056-10744056 FN2580-S SNP A -> C AC=2;AN=198;BQB=0.56545;DP=4133;DP4=1914,2008,18,21;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00193564;MQB=5.11645e-16;MQSB=0.0469066;RPB=0.690542;SGB=86.437;VDB=0.702985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.10:10747303 chr10:010747303 0 W/10747303-10747303 FN2620-S SNP T -> C AC=2;AN=198;BQB=0.336232;DP=3981;DP4=1758,1920,29,31;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=3.37907e-15;MQSB=0.52423;RPB=0.905611;SGB=229.946;VDB=0.409539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.10:10753828 chr10:010753828 0 W/10753828-10753828 FN3296-S SNP G -> T AC=1;AN=184;BQB=0.906349;DP=2443;DP4=1078,1257,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00204666;MQB=8.23857e-06;MQSB=0.000115904;RPB=0.590267;SGB=18.2315;VDB=0.737558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.10:10756857 chr10:010756857 0 W/10756857-10756857 FN1314-S Single Base Substitution C-T INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN4271-S.SNP.10:10769997 chr10:010769997 0 W/10769997-10769997 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.962169;DP=2130;DP4=969,1108,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.29201e-05;MQSB=0.776861;RPB=0.893138;SGB=30.1021;VDB=0.913132;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.10:10778331 chr10:010778331 0 W/10778331-10778331 FN1031-S Single Base Substitution T-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN486-S.SNP.10:10778828 chr10:010778828 0 W/10778828-10778828 FN486-S Single Base Substitution C-A INTERGENIC HOMO SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2594-S.SNP.10:10780024 chr10:010780024 0 W/10780024-10780024 FN2594-S SNP G -> T AC=1;AN=198;BQB=0.502169;DP=3613;DP4=1748,1619,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.0123993;MQSB=0.379288;RPB=0.929064;SGB=40.3588;VDB=0.0705986;EFF=INTRON(MODIFIER||||69|LOC_Os10g21160|protein_coding|CODING|LOC_Os10g21160.1|1|1) FN3558-S.SNP.10:10789172 chr10:010789172 0 W/10789172-10789172 FN3558-S SNP G -> A AC=1;AN=188;BQB=0.977964;DP=2341;DP4=1222,1050,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.5379e-05;MQSB=0.417382;RPB=0.98094;SGB=48.979;VDB=0.730534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A60T|285|LOC_Os10g21190|protein_coding|CODING|LOC_Os10g21190.1|1|1) FN2589-S.SNP.10:10793087 chr10:010793087 0 W/10793087-10793087 FN2589-S SNP G -> A AC=1;AN=198;BQB=0.1623;DP=5599;DP4=2161,3040,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=20;MQ0F=0.360957;MQB=0.0540328;MQSB=7.94523e-09;RPB=0.102052;SGB=-15.026;VDB=0.748939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.10:10931559 chr10:010931559 0 W/10931559-10931559 FN1448-S Single Base Substitution G-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1439-S.SNP.10:10931961 chr10:010931961 0 W/10931961-10931961 FN1439-S Single Base Substitution G-T INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN3905-S.SNP.10:10945658 chr10:010945658 0 W/10945658-10945658 FN3905-S SNP T -> A AC=1;AN=158;BQB=0.834447;DP=2463;DP4=1049,1260,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.54053e-05;MQSB=0.859869;RPB=0.64668;SGB=42.6978;VDB=0.702665;EFF=INTRON(MODIFIER||||192|LOC_Os10g21390|protein_coding|CODING|LOC_Os10g21390.1|1|1) FN1499-S.SNP.10:10952343 chr10:010952343 0 W/10952343-10952343 FN1499-S Single Base Substitution A-T INTERGENIC Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN632-S.SNP.10:10954024 chr10:010954024 0 W/10954024-10954024 FN632-S Single Base Substitution G-A INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN3723-S.SNP.10:10969504 chr10:010969504 0 W/10969504-10969504 FN3723-S SNP G -> A AC=1;AN=190;BQB=0.041453;DP=3033;DP4=1340,1596,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.95214e-05;MQSB=0.96214;RPB=0.479732;SGB=2.55724;VDB=0.712113;EFF=INTRON(MODIFIER||||74|LOC_Os10g21420|protein_coding|CODING|LOC_Os10g21420.1|1|1) FN2789-S.SNP.10:10979644 chr10:010979644 0 W/10979644-10979644 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.552121;DP=3841;DP4=1617,1861,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.87539e-06;MQSB=0.981991;RPB=0.776127;SGB=40.3588;VDB=0.910825;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.10:10981069 chr10:010981069 0 W/10981069-10981069 FN910-S Single Base Substitution C-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN1579-S.SNP.10:10981533 chr10:010981533 0 W/10981533-10981533 FN1579-S Single Base Substitution G-A INTERGENIC HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2392.SNP.10:10992823 chr10:010992823 0 W/10992823-10992823 FN2392 SNP T -> C AC=1;AN=200;BQB=0.611758;DP=4943;DP4=2438,2274,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.30652e-12;MQSB=0.991661;RPB=0.672884;SGB=58.2954;VDB=0.140396;EFF=UTR_3_PRIME(MODIFIER||2076||548|LOC_Os10g21470|protein_coding|CODING|LOC_Os10g21470.1|5|1) FN2392.SNP.10:10992824 chr10:010992824 0 W/10992824-10992824 FN2392 SNP A -> C AC=1;AN=200;BQB=0.833457;DP=4955;DP4=2397,2288,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.05902e-11;MQSB=0.929933;RPB=0.639701;SGB=37.3004;VDB=0.109545;EFF=UTR_3_PRIME(MODIFIER||2075||548|LOC_Os10g21470|protein_coding|CODING|LOC_Os10g21470.1|5|1) FN-194.SNP.10:10994696 chr10:010994696 0 W/10994696-10994696 FN-194 Single Base Substitution A-G INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2588-S.SNP.10:11002936 chr10:011002936 0 W/11002936-11002936 FN2588-S SNP G -> A AC=2;AN=198;BQB=0.989028;DP=3882;DP4=1796,1850,20,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.94541e-17;MQSB=0.868631;RPB=0.993651;SGB=73.4614;VDB=0.947112;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.10:11007335 chr10:011007335 0 W/11007335-11007335 FN1471-S SNP A -> G AC=1;AN=188;BQB=0.0159623;DP=3754;DP4=1778,1930,19,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.29622e-08;MQSB=0.914182;RPB=0.693843;SGB=-287.9;VDB=0.158452;EFF=INTRON(MODIFIER||||537|LOC_Os10g21490|protein_coding|CODING|LOC_Os10g21490.1|4|1) FN3714-S.SNP.10:11007907 chr10:011007907 0 W/11007907-11007907 FN3714-S SNP T -> A AC=2;AN=190;BQB=0.692921;DP=2698;DP4=1569,1008,33,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.39735e-28;MQSB=0.989212;RPB=0.392347;SGB=243.809;VDB=0.315318;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R376S|537|LOC_Os10g21490|protein_coding|CODING|LOC_Os10g21490.1|3|1) FN3316-S.SNP.10:11013244 chr10:011013244 0 W/11013244-11013244 FN3316-S SNP C -> T AC=1;AN=184;BQB=0.93787;DP=3066;DP4=1633,1328,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.012394;MQB=0.000754774;MQSB=4.40189e-05;RPB=0.785613;SGB=56.8786;VDB=0.68931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.10:11013703 chr10:011013703 0 W/11013703-11013703 FN1735-S SNP C -> T AC=2;AN=188;BQB=0.913203;DP=2561;DP4=1268,1238,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.90218e-18;MQSB=0.825656;RPB=0.270709;SGB=84.5719;VDB=0.955385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.10:11022112 chr10:011022112 0 W/11022112-11022112 FN3309-S SNP C -> T AC=1;AN=184;BQB=0.608718;DP=2893;DP4=1293,1486,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.40824e-12;MQSB=0.994449;RPB=0.645613;SGB=103.004;VDB=0.730628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.10:11029483 chr10:011029483 0 W/11029483-11029483 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.987777;DP=4100;DP4=1985,1960,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.93552e-11;MQSB=0.475033;RPB=0.654821;SGB=58.1246;VDB=0.348454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A421V|423|LOC_Os10g21540|protein_coding|CODING|LOC_Os10g21540.1|4|1) FN1089-S.SNP.10:11029918 chr10:011029918 0 W/11029918-11029918 FN1089-S Single Base Substitution A-C INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2411.SNP.10:11030208 chr10:011030208 0 W/11030208-11030208 FN2411 SNP G -> T AC=1;AN=200;BQB=0.769772;DP=4713;DP4=2442,1962,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.13594e-16;MQSB=0.997152;RPB=0.0881814;SGB=79.9264;VDB=0.55303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.10:11031643 chr10:011031643 0 W/11031643-11031643 FN2446 SNP A -> G AC=1;AN=200;BQB=0.695204;DP=4576;DP4=2066,2235,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000655594;MQB=5.6177e-13;MQSB=0.964465;RPB=0.87566;SGB=65.5058;VDB=0.348107;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.10:11036875 chr10:011036875 0 W/11036875-11036875 FN808-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g21560 no apical meristem protein, putative, expressed SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN869-S.SNP.10:11036875 chr10:011036875 0 W/11036875-11036875 FN869-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g21560 no apical meristem protein, putative, expressed SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN1236-S.SNP.10:11057136 chr10:011057136 0 W/11057136-11057136 FN1236-S Single Base Substitution A-T INTRON HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN544-S.SNP.10:11060160 chr10:011060160 0 W/11060160-11060160 FN544-S Single Base Substitution G-T INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2161-S.SNP.10:11060663 chr10:011060663 0 W/11060663-11060663 FN2161-S SNP C -> T AC=1;AN=168;BQB=0.00540488;DP=3396;DP4=1832,1529,7,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.83479e-06;MQSB=0.92453;RPB=0.989874;SGB=-92.9238;VDB=0.774491;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.10:11061631 chr10:011061631 0 W/11061631-11061631 FN-207 Single Base Substitution G-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1561-S.SNP.10:11061856 chr10:011061856 0 W/11061856-11061856 FN1561-S Single Base Substitution A-C INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN4148-S.SNP.10:11064672 chr10:011064672 0 W/11064672-11064672 FN4148-S SNP A -> G AC=1;AN=170;BQB=0.999998;DP=2353;DP4=1364,898,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.0110497;MQB=2.37817e-05;MQSB=0.000857227;RPB=0.23526;SGB=55.5339;VDB=0.0570914;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.10:11064676 chr10:011064676 0 W/11064676-11064676 FN1529-S Single Base Substitution T-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN4188-S.SNP.10:11066372 chr10:011066372 0 W/11066372-11066372 FN4188-S SNP T -> A AC=2;AN=170;BQB=0.990447;DP=2640;DP4=1333,1210,19,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.49742e-17;MQSB=0.420718;RPB=0.993343;SGB=150.053;VDB=0.530841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.10:11067224 chr10:011067224 0 W/11067224-11067224 FN4165-S SNP A -> T AC=2;AN=170;BQB=0.821085;DP=2332;DP4=1035,1202,6,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.192e-14;MQSB=0.960605;RPB=0.710356;SGB=69.3045;VDB=0.466329;EFF=INTERGENIC(MODIFIER||||||||||1) FN_829-2-5.SNP.10:11070579 chr10:011070579 0 W/11070579-11070579 FN_829-2-5 Single Base Substitution G-C HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN402-S.SNP.10:11071497 chr10:011071497 0 W/11071497-11071497 FN402-S Single Base Substitution G-A INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN3359-S.SNP.10:11072857 chr10:011072857 0 W/11072857-11072857 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.998416;DP=2811;DP4=1383,1334,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.62567e-10;MQSB=0.984986;RPB=0.620922;SGB=75.8731;VDB=0.848684;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.10:11077321 chr10:011077321 0 W/11077321-11077321 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.998803;DP=2956;DP4=1365,1494,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58074e-07;MQSB=0.999994;RPB=0.529473;SGB=18.2315;VDB=0.736622;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.10:11080900 chr10:011080900 0 W/11080900-11080900 FN598-S Single Base Substitution T-A INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN3992-S.SNP.10:11081286 chr10:011081286 0 W/11081286-11081286 FN3992-S SNP G -> T AC=1;AN=168;BQB=0.949681;DP=2615;DP4=1343,1175,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.14342e-10;MQSB=0.998839;RPB=0.927206;SGB=61.0344;VDB=0.822343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.10:11081292 chr10:011081292 0 W/11081292-11081292 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.996363;DP=2626;DP4=1332,1135,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.71454e-11;MQSB=0.996455;RPB=0.774304;SGB=45.0404;VDB=0.84325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.10:11084596 chr10:011084596 0 W/11084596-11084596 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.348032;DP=3806;DP4=1981,1537,24,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33932e-14;MQSB=0.250105;RPB=0.596709;SGB=144.727;VDB=0.671954;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.10:11086510 chr10:011086510 0 W/11086510-11086510 FN781-S Single Base Substitution G-A INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN-156.SNP.10:11090118 chr10:011090118 0 W/11090118-11090118 FN-156 Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2554-S.SNP.10:11098367 chr10:011098367 0 W/11098367-11098367 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.390973;DP=4151;DP4=1865,2019,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.6501e-12;MQSB=0.945742;RPB=0.922558;SGB=18.9201;VDB=0.430582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.10:11098643 chr10:011098643 0 W/11098643-11098643 FN2284 SNP C -> T AC=1;AN=192;BQB=0.84349;DP=4703;DP4=2339,2114,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.20249e-16;MQSB=0.443498;RPB=0.540918;SGB=126.804;VDB=0.240601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.10:11105395 chr10:011105395 0 W/11105395-11105395 FN-95 Single Base Substitution C-T INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1319-S.SNP.10:11106087 chr10:011106087 0 W/11106087-11106087 FN1319-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN-346.SNP.10:11107195 chr10:011107195 0 W/11107195-11107195 FN-346 Single Base Substitution A-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN282-S.SNP.10:11108174 chr10:011108174 0 W/11108174-11108174 FN282-S Single Base Substitution T-A INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. W466-5-1.SNP.10:11108710 chr10:011108710 0 W/11108710-11108710 W466-5-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2596-S.SNP.10:11112126 chr10:011112126 0 W/11112126-11112126 FN2596-S SNP C -> T AC=1;AN=186;BQB=0.609806;DP=3811;DP4=1685,1922,5,6;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.07798e-06;MQSB=0.938199;RPB=0.325818;SGB=13.7737;VDB=0.219224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.10:11112229 chr10:011112229 0 W/11112229-11112229 FN1548-S SNP G -> T AC=2;AN=188;BQB=0.790436;DP=2826;DP4=1200,1577,10,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.7362e-11;MQSB=0.808273;RPB=0.934064;SGB=31.1628;VDB=0.402468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1548-S.SNP.10:11112230 chr10:011112230 0 W/11112230-11112230 FN1548-S SNP A -> T AC=2;AN=188;BQB=0.932066;DP=2820;DP4=1202,1566,10,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.17384e-09;MQSB=0.778497;RPB=0.9453;SGB=31.1628;VDB=0.314481;EFF=INTERGENIC(MODIFIER||||||||||1) FN552-S.SNP.10:11118370 chr10:011118370 0 W/11118370-11118370 FN552-S Single Base Substitution A-C INTERGENIC HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2165-S.SNP.10:11119567 chr10:011119567 0 W/11119567-11119567 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.781041;DP=1192;DP4=423,738,3,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.68634e-05;MQSB=0.995615;RPB=0.999153;SGB=12.4615;VDB=0.0612308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.10:11119568 chr10:011119568 0 W/11119568-11119568 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.59279;DP=1191;DP4=423,735,2,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.19184e-06;MQSB=0.995314;RPB=0.997231;SGB=34.4498;VDB=0.180184;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.10:11121868 chr10:011121868 0 W/11121868-11121868 FN1460-S Single Base Substitution G-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN772-S.SNP.10:11123672 chr10:011123672 0 W/11123672-11123672 FN772-S Single Base Substitution A-G INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3481-S.SNP.10:11126341 chr10:011126341 0 W/11126341-11126341 FN3481-S SNP G -> C AC=1;AN=184;BQB=0.822433;DP=2542;DP4=1149,1333,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.42741e-09;MQSB=0.988973;RPB=0.731211;SGB=53.3568;VDB=0.398319;EFF=INTRON(MODIFIER||||436|LOC_Os10g21700|protein_coding|CODING|LOC_Os10g21700.1|3|1) FN3723-S.SNP.10:11129572 chr10:011129572 0 W/11129572-11129572 FN3723-S SNP T -> C AC=1;AN=190;BQB=0.94059;DP=2878;DP4=1278,1445,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.8118e-07;MQSB=0.97873;RPB=0.99921;SGB=36.1006;VDB=0.97972;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.10:11136974 chr10:011136974 0 W/11136974-11136974 FN-194 Single Base Substitution G-A INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1069-S.SNP.10:11138892 chr10:011138892 0 W/11138892-11138892 FN1069-S Single Base Substitution G-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2619-S.SNP.10:11143353 chr10:011143353 0 W/11143353-11143353 FN2619-S SNP T -> G AC=1;AN=198;BQB=0.627717;DP=2739;DP4=937,1513,4,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000365097;MQB=0.00227463;MQSB=8.37174e-09;RPB=0.874227;SGB=50.9344;VDB=0.571254;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.10:11144076 chr10:011144076 0 W/11144076-11144076 FN4304-S SNP G -> A AC=2;AN=170;BQB=0.943438;DP=2538;DP4=1232,1182,7,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.96551e-12;MQSB=0.460274;RPB=0.414135;SGB=101.184;VDB=0.438932;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.10:11148483 chr10:011148483 0 W/11148483-11148483 FN_815-4-1 Single Base Substitution C-A HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3429-S.SNP.10:11149458 chr10:011149458 0 W/11149458-11149458 FN3429-S SNP C -> A AC=2;AN=184;BQB=0.998991;DP=2566;DP4=1351,1080,7,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.66568e-07;MQSB=0.988457;RPB=0.662191;SGB=53.2642;VDB=0.271929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D35Y|120|LOC_Os10g21720|protein_coding|CODING|LOC_Os10g21720.1|1|1) FN439-S.SNP.10:11150916 chr10:011150916 0 W/11150916-11150916 FN439-S Single Base Substitution C-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1346-S.SNP.10:11156211 chr10:011156211 0 W/11156211-11156211 FN1346-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g21730 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2684-S.SNP.10:11165745 chr10:011165745 0 W/11165745-11165745 FN2684-S SNP G -> T AC=1;AN=200;BQB=0.94504;DP=4714;DP4=2061,2441,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9036e-07;MQSB=0.999428;RPB=0.927639;SGB=36.6644;VDB=0.18489;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.10:11172672 chr10:011172672 0 W/11172672-11172672 FN1283-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1022-S.SNP.10:11180781 chr10:011180781 0 W/11180781-11180781 FN1022-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3110-S.SNP.10:11191354 chr10:011191354 0 W/11191354-11191354 FN3110-S SNP A -> T AC=1;AN=184;BQB=0.783052;DP=3764;DP4=1347,2260,5,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.99588e-12;MQSB=0.87209;RPB=0.214791;SGB=70.9657;VDB=0.18698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.10:11195667 chr10:011195667 0 W/11195667-11195667 FN2260-S SNP A -> G AC=1;AN=190;BQB=0.98244;DP=5240;DP4=2215,2660,24,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.85913e-22;MQSB=0.989381;RPB=0.86738;SGB=181.158;VDB=0.209992;EFF=INTRON(MODIFIER||||1186|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.1|10|1),INTRON(MODIFIER||||608|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.2|9|1) FN4090-S.SNP.10:11196508 chr10:011196508 0 W/11196508-11196508 FN4090-S SNP A -> G AC=1;AN=182;BQB=0.818592;DP=2762;DP4=1319,1360,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.86193e-09;MQSB=0.997448;RPB=0.996712;SGB=57.644;VDB=0.955013;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F604|608|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.2|8|1),INTRON(MODIFIER||||1186|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.1|8|1) FN2495.SNP.10:11197466 chr10:011197466 0 W/11197466-11197466 FN2495 SNP T -> C AC=1;AN=200;BQB=0.152933;DP=4604;DP4=2008,2314,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12593e-10;MQSB=0.998472;RPB=0.999806;SGB=34.6953;VDB=0.615287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E410G|1186|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E394G|608|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.2|5|1),SPLICE_SITE_REGION(LOW||||1186|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.1|5|1),SPLICE_SITE_REGION(LOW||||608|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.2|5|1) FN2136-S.SNP.10:11199398 chr10:011199398 0 W/11199398-11199398 FN2136-S SNP A -> G AC=1;AN=168;BQB=0.240772;DP=4370;DP4=2108,2215,12,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.61896e-12;MQSB=0.971243;RPB=0.608783;SGB=-75.914;VDB=0.347892;EFF=INTRON(MODIFIER||||1186|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.1|3|1),INTRON(MODIFIER||||608|LOC_Os10g21810|protein_coding|CODING|LOC_Os10g21810.2|3|1) FN3846-S.SNP.10:11204920 chr10:011204920 0 W/11204920-11204920 FN3846-S SNP T -> C AC=1;AN=190;BQB=0.940978;DP=2348;DP4=1132,1139,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000316977;MQSB=0.96255;RPB=0.890786;SGB=21.7749;VDB=0.220895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.10:11205380 chr10:011205380 0 W/11205380-11205380 FN1053-S Single Base Substitution T-C INTERGENIC HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2453.SNP.10:11224039 chr10:011224039 0 W/11224039-11224039 FN2453 SNP G -> A AC=1;AN=200;BQB=0.967831;DP=4448;DP4=2178,2029,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.10735e-08;MQSB=0.654833;RPB=0.956578;SGB=-0.141083;VDB=0.830975;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C471|724|LOC_Os10g21840|protein_coding|CODING|LOC_Os10g21840.1|3|1) FN2295.SNP.10:11228152 chr10:011228152 0 W/11228152-11228152 FN2295 SNP G -> T AC=1;AN=192;BQB=0.996203;DP=5264;DP4=2474,2429,16,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.40004e-18;MQSB=0.932661;RPB=0.804535;SGB=-44.0408;VDB=0.189373;EFF=INTRON(MODIFIER||||1505|LOC_Os10g21850|protein_coding|CODING|LOC_Os10g21850.1|1|1) FN3774-S.SNP.10:11239706 chr10:011239706 0 W/11239706-11239706 FN3774-S SNP G -> T AC=1;AN=190;BQB=0.500573;DP=2647;DP4=1489,1050,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.71627e-05;MQSB=0.994155;RPB=0.273348;SGB=53.6492;VDB=0.250472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.10:11241930 chr10:011241930 0 W/11241930-11241930 FN3064-S SNP G -> A AC=2;AN=184;BQB=0.918688;DP=3058;DP4=1511,1433,15,19;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.00163506;MQB=1.11452e-06;MQSB=0.704311;RPB=0.8614;SGB=109.705;VDB=0.756891;EFF=INTERGENIC(MODIFIER||||||||||1) FN-364.SNP.10:11242544 chr10:011242544 0 W/11242544-11242544 FN-364 Single Base Substitution C-T INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2754-S.SNP.10:11244843 chr10:011244843 0 W/11244843-11244843 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.321571;DP=4722;DP4=2009,2463,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.41209e-07;MQSB=0.997972;RPB=0.785937;SGB=25.849;VDB=0.193383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L130F|132|LOC_Os10g21860|protein_coding|CODING|LOC_Os10g21860.1|1|1) FN3418-S.SNP.10:11247468 chr10:011247468 0 W/11247468-11247468 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.995037;DP=3016;DP4=1572,1349,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.16506e-06;MQSB=0.967846;RPB=0.539037;SGB=25.1826;VDB=0.0376527;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.10:11248082 chr10:011248082 0 W/11248082-11248082 FN447-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN2231-S.SNP.10:11256977 chr10:011256977 0 W/11256977-11256977 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.848398;DP=4799;DP4=2093,2472,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80249e-12;MQSB=0.259234;RPB=0.000754226;SGB=71.6393;VDB=0.00230457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.10:11258249 chr10:011258249 0 W/11258249-11258249 FN3396-S SNP C -> A AC=1;AN=184;BQB=0.943265;DP=3220;DP4=1413,1707,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.16073e-09;MQSB=0.990437;RPB=0.716758;SGB=75.8731;VDB=0.5892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.10:11261339 chr10:011261339 0 W/11261339-11261339 FN2554-S SNP T -> A AC=1;AN=186;BQB=0.907613;DP=4081;DP4=1735,2136,8,15;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0;MQB=5.71893e-10;MQSB=0.00508796;RPB=0.912609;SGB=17.325;VDB=0.956788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.10:11268834 chr10:011268834 0 W/11268834-11268834 FN2142-S SNP C -> T AC=1;AN=168;BQB=0.601279;DP=3294;DP4=1704,1547,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000135634;MQSB=0.86886;RPB=0.999959;SGB=10.0307;VDB=0.331028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3905-S.SNP.10:11281119 chr10:011281119 0 W/11281119-11281119 FN3905-S SNP G -> A AC=1;AN=158;BQB=0.984461;DP=2362;DP4=1238,1051,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.11256e-09;MQSB=0.963746;RPB=0.638286;SGB=37.4429;VDB=0.630944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1355H|2280|LOC_Os10g21910|protein_coding|CODING|LOC_Os10g21910.1|25|1) FN2304.SNP.10:11287194 chr10:011287194 0 W/11287194-11287194 FN2304 SNP A -> G AC=1;AN=192;BQB=0.996624;DP=5039;DP4=2330,2449,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.41426e-21;MQSB=0.652172;RPB=0.968915;SGB=103.938;VDB=0.598258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.10:11287195 chr10:011287195 0 W/11287195-11287195 FN2304 SNP G -> A AC=1;AN=192;BQB=0.985011;DP=5020;DP4=2316,2463,19,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.04514e-21;MQSB=0.790617;RPB=0.986884;SGB=103.938;VDB=0.598258;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.10:11287859 chr10:011287859 0 W/11287859-11287859 FN1571-S Single Base Substitution A-G INTERGENIC Homo SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN-105.SNP.10:11290587 chr10:011290587 0 W/11290587-11290587 FN-105 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g21920 PPR repeat containing protein, expressed SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN-362.SNP.10:11294952 chr10:011294952 0 W/11294952-11294952 FN-362 Single Base Substitution A-G INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN767-S.SNP.10:11316895 chr10:011316895 0 W/11316895-11316895 FN767-S Single Base Substitution A-G INTRON HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2729-S.SNP.10:11323703 chr10:011323703 0 W/11323703-11323703 FN2729-S SNP T -> C AC=1;AN=200;BQB=0.958821;DP=4706;DP4=2157,2330,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.88692e-11;MQSB=0.951684;RPB=0.947932;SGB=58.2954;VDB=0.899324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.10:11324058 chr10:011324058 0 W/11324058-11324058 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.991196;DP=1907;DP4=778,1054,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.38876e-06;MQSB=0.867228;RPB=0.924595;SGB=47.0672;VDB=0.750182;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|11|1) FN558-S.SNP.10:11325493 chr10:011325493 0 W/11325493-11325493 FN558-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g21950 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2651-S.SNP.10:11326745 chr10:011326745 0 W/11326745-11326745 FN2651-S SNP C -> A AC=1;AN=200;BQB=0.892995;DP=4634;DP4=2124,2155,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.49267e-13;MQSB=0.932508;RPB=0.727949;SGB=65.5058;VDB=0.0753379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G1411C|1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|9|1) FN2191-S.SNP.10:11326779 chr10:011326779 0 W/11326779-11326779 FN2191-S SNP G -> C AC=1;AN=190;BQB=0.270191;DP=4721;DP4=1976,2205,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.60317e-05;MQSB=0.998886;RPB=0.498396;SGB=-60.3192;VDB=0.724107;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|8|1) FN1233-S.SNP.10:11329347 chr10:011329347 0 W/11329347-11329347 FN1233-S Single Base Substitution C-T INTRON HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN496-S.SNP.10:11329347 chr10:011329347 0 W/11329347-11329347 FN496-S Single Base Substitution C-T INTRON HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN622-S.SNP.10:11330755 chr10:011330755 0 W/11330755-11330755 FN622-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-273.SNP.10:11334327 chr10:011334327 0 W/11334327-11334327 FN-273 Single Base Substitution G-A INTRON HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN2085-S.SNP.10:11334327 chr10:011334327 0 W/11334327-11334327 FN2085-S SNP G -> A AC=2;AN=168;BQB=0.85038;DP=2203;DP4=838,1277,5,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.23149e-11;MQSB=0.8862;RPB=0.950582;SGB=69.0561;VDB=0.143175;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|1|1) FN3398-S.SNP.10:11334327 chr10:011334327 0 W/11334327-11334327 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.968045;DP=3343;DP4=1933,1286,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.50197e-07;MQSB=0.979662;RPB=0.98613;SGB=62.3078;VDB=0.423298;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|1|1) FN3759-S.SNP.10:11334327 chr10:011334327 0 W/11334327-11334327 FN3759-S SNP G -> A AC=2;AN=190;BQB=0.941681;DP=2552;DP4=1275,1141,13,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.41664e-09;MQSB=0.977165;RPB=0.9969;SGB=90.0802;VDB=0.517404;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|1|1) FN4260-S.SNP.10:11334327 chr10:011334327 0 W/11334327-11334327 FN4260-S SNP G -> A AC=2;AN=170;BQB=0.995704;DP=2262;DP4=1126,1024,25,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.31093e-17;MQSB=0.998268;RPB=0.959756;SGB=154.496;VDB=0.962194;EFF=INTRON(MODIFIER||||1884|LOC_Os10g21950|protein_coding|CODING|LOC_Os10g21950.1|1|1) FN-243.SNP.10:11335890 chr10:011335890 0 W/11335890-11335890 FN-243 Single Base Substitution A-G INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN-138.SNP.10:11341426 chr10:011341426 0 W/11341426-11341426 FN-138 Single Base Substitution A-C INTERGENIC HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN-92.SNP.10:11342721 chr10:011342721 0 W/11342721-11342721 FN-92 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN2260-S.SNP.10:11342721 chr10:011342721 0 W/11342721-11342721 FN2260-S SNP C -> T AC=2;AN=190;BQB=0.969556;DP=4603;DP4=2055,2229,26,29;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00369324;MQB=8.39613e-22;MQSB=0.216742;RPB=0.539404;SGB=185.363;VDB=0.120189;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L43|249|LOC_Os10g21970|protein_coding|CODING|LOC_Os10g21970.1|1|1) FN933-S.SNP.10:11343098 chr10:011343098 0 W/11343098-11343098 FN933-S Single Base Substitution G-A INTRON HET SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN2404.SNP.10:11344925 chr10:011344925 0 W/11344925-11344925 FN2404 SNP A -> T AC=1;AN=200;BQB=0.617884;DP=4812;DP4=2174,2241,21,14;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00207814;MQB=0.0169926;MQSB=7.70714e-44;RPB=0.35259;SGB=76.378;VDB=0.463795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2539-S.SNP.10:11350052 chr10:011350052 0 W/11350052-11350052 FN2539-S SNP T -> A AC=2;AN=198;BQB=0.991936;DP=4195;DP4=2609,1436,24,6;HOB=0.019998;ICB=0.495001;MQ=26;MQ0F=0.310846;MQB=0.124618;MQSB=0;RPB=0.632416;SGB=63.0809;VDB=0.467763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F1058L|1647|LOC_Os10g21980|protein_coding|CODING|LOC_Os10g21980.1|4|1) FN1488-S.SNP.10:11351597 chr10:011351597 0 W/11351597-11351597 FN1488-S Single Base Substitution G-T SPLICE_SITE_REGION HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3527-S.SNP.10:11358809 chr10:011358809 0 W/11358809-11358809 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.698306;DP=3546;DP4=1981,1477,15,3;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.000282008;MQB=1.0494e-08;MQSB=0.497124;RPB=0.988936;SGB=31.1628;VDB=0.67914;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.10:11362695 chr10:011362695 0 W/11362695-11362695 FN-184 Single Base Substitution G-A UTR_3_PRIME HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2707-S.SNP.10:11363731 chr10:011363731 0 W/11363731-11363731 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.919325;DP=4440;DP4=2097,2127,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.66723e-11;MQSB=0.616762;RPB=0.946734;SGB=72.6852;VDB=0.41775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G2032S|2035|LOC_Os10g22010|protein_coding|CODING|LOC_Os10g22010.1|4|1) FN1499-S.SNP.10:11367829 chr10:011367829 0 W/11367829-11367829 FN1499-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN718-S.SNP.10:11369718 chr10:011369718 0 W/11369718-11369718 FN718-S Single Base Substitution G-A INTRON HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN919-S.SNP.10:11386778 chr10:011386778 0 W/11386778-11386778 FN919-S Single Base Substitution G-A INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN919-S.SNP.10:11386779 chr10:011386779 0 W/11386779-11386779 FN919-S Single Base Substitution C-A INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN-199.SNP.10:11386897 chr10:011386897 0 W/11386897-11386897 FN-199 Single Base Substitution C-T INTRON HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2675-S.SNP.10:11389485 chr10:011389485 0 W/11389485-11389485 FN2675-S SNP G -> A AC=1;AN=200;BQB=0.933331;DP=4805;DP4=2017,2526,3,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.62556e-07;MQSB=0.9974;RPB=0.894204;SGB=33.0593;VDB=0.872842;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.10:11397633 chr10:011397633 0 W/11397633-11397633 FN402-S Single Base Substitution T-C INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN458-S.SNP.10:11397986 chr10:011397986 0 W/11397986-11397986 FN458-S Single Base Substitution C-A INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN-171.SNP.10:11402575 chr10:011402575 0 W/11402575-11402575 FN-171 Single Base Substitution C-T INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1093-S.SNP.10:11417524 chr10:011417524 0 W/11417524-11417524 FN1093-S Single Base Substitution A-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN3875-S.SNP.10:11419782 chr10:011419782 0 W/11419782-11419782 FN3875-S SNP T -> C AC=2;AN=158;BQB=0.983386;DP=2304;DP4=1022,1206,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.24402e-14;MQSB=0.955819;RPB=0.984475;SGB=71.1374;VDB=0.603015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cGa|Q220R|238|LOC_Os10g22110|protein_coding|CODING|LOC_Os10g22110.1|5|1) FN1011-S.SNP.10:11429308 chr10:011429308 0 W/11429308-11429308 FN1011-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g22130 retrotransposon protein, putative, unclassified, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3311-S.SNP.10:11429641 chr10:011429641 0 W/11429641-11429641 FN3311-S SNP G -> A AC=2;AN=184;BQB=0.045303;DP=2915;DP4=1292,1497,21,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000686106;MQB=2.36224e-20;MQSB=0.997613;RPB=0.150799;SGB=-3.23467;VDB=0.974899;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T361|815|LOC_Os10g22130|protein_coding|CODING|LOC_Os10g22130.1|2|1) FN1650-S.SNP.10:11429651 chr10:011429651 0 W/11429651-11429651 FN1650-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g22130 retrotransposon protein, putative, unclassified, expressed SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN-86.SNP.10:11446456 chr10:011446456 0 W/11446456-11446456 FN-86 Single Base Substitution T-G INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1043-S.SNP.10:11447268 chr10:011447268 0 W/11447268-11447268 FN1043-S Single Base Substitution G-A INTERGENIC HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN3732-S.SNP.10:11453451 chr10:011453451 0 W/11453451-11453451 FN3732-S SNP A -> G AC=1;AN=190;BQB=0.889941;DP=3411;DP4=1634,1595,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.126942;MQB=0.998385;MQSB=0.000225385;RPB=0.934833;SGB=18.552;VDB=0.0319637;EFF=INTRON(MODIFIER||||1575|LOC_Os10g22164|protein_coding|CODING|LOC_Os10g22164.1|8|1) FN3496-S.SNP.10:11456350 chr10:011456350 0 W/11456350-11456350 FN3496-S SNP A -> T AC=2;AN=188;BQB=0.951098;DP=3697;DP4=1718,1879,11,14;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00351636;MQB=1.07736e-08;MQSB=0.388115;RPB=0.994138;SGB=108.042;VDB=0.15409;EFF=INTRON(MODIFIER||||1575|LOC_Os10g22164|protein_coding|CODING|LOC_Os10g22164.1|1|1) FN-223.SNP.10:11456677 chr10:011456677 0 W/11456677-11456677 FN-223 Single Base Substitution C-G INTRON HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2274-S.SNP.10:11458867 chr10:011458867 0 W/11458867-11458867 FN2274-S SNP C -> T AC=2;AN=190;BQB=0.86835;DP=4574;DP4=2173,2161,21,24;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0157411;MQB=0.000423009;MQSB=0.859793;RPB=0.222084;SGB=199.373;VDB=0.079464;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A153T|1575|LOC_Os10g22164|protein_coding|CODING|LOC_Os10g22164.1|1|1) FN3673-S.SNP.10:11466070 chr10:011466070 0 W/11466070-11466070 FN3673-S SNP G -> A AC=2;AN=190;BQB=0.85736;DP=2698;DP4=1276,1339,12,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.24472e-14;MQSB=0.999842;RPB=0.838025;SGB=46.6446;VDB=0.696974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3519-S.SNP.10:11471585 chr10:011471585 0 W/11471585-11471585 FN3519-S SNP C -> T AC=1;AN=188;BQB=0.888827;DP=3740;DP4=2075,1584,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.69848e-10;MQSB=0.991797;RPB=0.902135;SGB=46.6141;VDB=0.764316;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S236|269|LOC_Os10g22190|protein_coding|CODING|LOC_Os10g22190.1|2|1) FN819-S.SNP.10:11472539 chr10:011472539 0 W/11472539-11472539 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2488.SNP.10:11472947 chr10:011472947 0 W/11472947-11472947 FN2488 SNP C -> T AC=1;AN=200;BQB=0.981175;DP=4048;DP4=2088,1615,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.85405e-05;MQSB=0.792235;RPB=0.963009;SGB=40.4492;VDB=0.463795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:11474082 chr10:011474082 0 W/11474082-11474082 FN2780-S SNP C -> G AC=1;AN=186;BQB=0.479521;DP=3108;DP4=1461,1408,6,14;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.00032175;MQB=1.80081e-07;MQSB=9.56626e-05;RPB=0.914884;SGB=12.5396;VDB=0.543357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.10:11477374 chr10:011477374 0 W/11477374-11477374 FN2329 SNP A -> C AC=1;AN=192;BQB=0.229261;DP=5022;DP4=2096,2433,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199124;MQB=9.70995e-11;MQSB=0.25297;RPB=0.932375;SGB=13.6122;VDB=0.921936;EFF=INTERGENIC(MODIFIER||||||||||1) FN3896-S.SNP.10:11478610 chr10:011478610 0 W/11478610-11478610 FN3896-S SNP T -> C AC=1;AN=158;BQB=0.71678;DP=2784;DP4=1337,1315,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.07219e-09;MQSB=0.87728;RPB=0.70054;SGB=54.2901;VDB=0.355608;EFF=INTERGENIC(MODIFIER||||||||||1) FN879-S.SNP.10:11478610 chr10:011478610 0 W/11478610-11478610 FN879-S Single Base Substitution T-C INTERGENIC HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN-291.SNP.10:11481378 chr10:011481378 0 W/11481378-11481378 FN-291 Single Base Substitution C-T INTERGENIC HOMO SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1475-S.SNP.10:11482731 chr10:011482731 0 W/11482731-11482731 FN1475-S Single Base Substitution T-C INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN2403.SNP.10:11483581 chr10:011483581 0 W/11483581-11483581 FN2403 SNP G -> A AC=1;AN=200;BQB=0.429104;DP=3855;DP4=1518,2140,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.0002754;MQSB=0.288281;RPB=0.253909;SGB=22.2439;VDB=0.211211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.10:11487417 chr10:011487417 0 W/11487417-11487417 FN1320-S Single Base Substitution C-T INTRON HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2495.SNP.10:11492985 chr10:011492985 0 W/11492985-11492985 FN2495 SNP C -> T AC=1;AN=200;BQB=0.683941;DP=4564;DP4=2309,1990,10,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000438212;MQB=3.73727e-06;MQSB=6.99079e-06;RPB=0.866005;SGB=54.6902;VDB=0.150061;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.10:11493924 chr10:011493924 0 W/11493924-11493924 FN759-S Single Base Substitution T-G INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN1682-S.SNP.10:11494534 chr10:011494534 0 W/11494534-11494534 FN1682-S SNP C -> T AC=1;AN=188;BQB=0.967084;DP=3249;DP4=1239,1978,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.40917e-09;MQSB=0.80457;RPB=0.951185;SGB=67.8739;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.10:11495001 chr10:011495001 0 W/11495001-11495001 FN3791-S SNP G -> A AC=1;AN=190;BQB=0.786009;DP=2715;DP4=1262,1382,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2722e-06;MQSB=0.990263;RPB=0.152;SGB=21.8853;VDB=0.702766;EFF=INTRON(MODIFIER||||688|LOC_Os10g22220|protein_coding|CODING|LOC_Os10g22220.1|4|1) FN2085-S.SNP.10:11495897 chr10:011495897 0 W/11495897-11495897 FN2085-S SNP T -> C AC=1;AN=168;BQB=0.435085;DP=2980;DP4=1389,1511,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02194e-06;MQSB=0.980638;RPB=0.599671;SGB=-16.665;VDB=0.057195;EFF=INTRON(MODIFIER||||688|LOC_Os10g22220|protein_coding|CODING|LOC_Os10g22220.1|3|1) FN1099-S.SNP.10:11496796 chr10:011496796 0 W/11496796-11496796 FN1099-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g22220 retrotransposon, putative, centromere-specific, expressed SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3790-S.SNP.10:11497152 chr10:011497152 0 W/11497152-11497152 FN3790-S SNP A -> G AC=1;AN=190;BQB=0.955509;DP=2848;DP4=1393,1361,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000351124;MQB=8.05087e-07;MQSB=0.964684;RPB=0.53797;SGB=39.9877;VDB=0.895256;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Cgc|C288R|688|LOC_Os10g22220|protein_coding|CODING|LOC_Os10g22220.1|2|1) FN2196-S.SNP.10:11497556 chr10:011497556 0 W/11497556-11497556 FN2196-S SNP A -> T AC=1;AN=190;BQB=0.998761;DP=4759;DP4=2092,2132,23,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25702e-16;MQSB=0.935574;RPB=0.785203;SGB=149.281;VDB=0.726682;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I175N|688|LOC_Os10g22220|protein_coding|CODING|LOC_Os10g22220.1|1|1) FN3864-S.SNP.10:11503697 chr10:011503697 0 W/11503697-11503697 FN3864-S SNP C -> T AC=2;AN=158;BQB=0.750126;DP=2859;DP4=1503,1237,18,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.07362e-15;MQSB=0.687185;RPB=0.923008;SGB=151.934;VDB=0.237255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.10:11508907 chr10:011508907 0 W/11508907-11508907 FN2553-S SNP G -> A AC=1;AN=186;BQB=0.185333;DP=3857;DP4=2057,1581,8,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.19995e-07;MQSB=0.99942;RPB=0.969298;SGB=-34.6161;VDB=0.969269;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.10:11509126 chr10:011509126 0 W/11509126-11509126 FN2373 SNP C -> T AC=1;AN=192;BQB=0.995411;DP=4946;DP4=2270,2357,4,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.59953e-07;MQSB=0.905189;RPB=0.633676;SGB=-15.333;VDB=0.115729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.10:11510571 chr10:011510571 0 W/11510571-11510571 FN3366-S SNP G -> A AC=1;AN=184;BQB=0.999561;DP=3491;DP4=1763,1634,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.03219e-09;MQSB=0.94412;RPB=0.581145;SGB=46.3132;VDB=0.297272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R224H|782|LOC_Os10g22240|protein_coding|CODING|LOC_Os10g22240.1|1|1) FN3729-S.SNP.10:11521499 chr10:011521499 0 W/11521499-11521499 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.998825;DP=2681;DP4=1171,1398,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30714e-12;MQSB=0.968805;RPB=0.746886;SGB=90.0802;VDB=0.168148;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.10:11522575 chr10:011522575 0 W/11522575-11522575 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.988482;DP=2430;DP4=1205,1146,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.92171e-06;MQSB=0.977139;RPB=0.756716;SGB=43.4296;VDB=0.303542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2424.SNP.10:11523630 chr10:011523630 0 W/11523630-11523630 FN2424 SNP T -> C AC=1;AN=200;BQB=0.571604;DP=4273;DP4=2034,1896,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61028e-15;MQSB=0.957715;RPB=0.27303;SGB=-7.6637;VDB=0.674949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.10:11533565 chr10:011533565 0 W/11533565-11533565 FN1346-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g22300 resistance protein, putative, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3581-S.SNP.10:11534480 chr10:011534480 0 W/11534480-11534480 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.981777;DP=2764;DP4=1289,1379,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.96094e-06;MQSB=0.978801;RPB=0.988843;SGB=28.9929;VDB=0.149309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G419R|721|LOC_Os10g22300|protein_coding|CODING|LOC_Os10g22300.1|6|1) FN2472.SNP.10:11536291 chr10:011536291 0 W/11536291-11536291 FN2472 SNP A -> T AC=2;AN=200;BQB=0.945666;DP=4911;DP4=2289,2359,29,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000203625;MQB=5.9038e-38;MQSB=0.859984;RPB=0.792584;SGB=151.928;VDB=0.0201653;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.10:11543084 chr10:011543084 0 W/11543084-11543084 FN1582-S Single Base Substitution C-T INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1108-S.SNP.10:11543382 chr10:011543382 0 W/11543382-11543382 FN1108-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2729-S.SNP.10:11551343 chr10:011551343 0 W/11551343-11551343 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.994324;DP=4960;DP4=2464,2249,21,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201613;MQB=8.53343e-16;MQSB=0.846131;RPB=0.865337;SGB=101.557;VDB=0.247848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.10:11552349 chr10:011552349 0 W/11552349-11552349 FN2457 SNP C -> T AC=1;AN=200;BQB=0.999016;DP=4860;DP4=2269,2322,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69762e-18;MQSB=0.990409;RPB=0.667885;SGB=30.3571;VDB=0.586579;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.10:11556110 chr10:011556110 0 W/11556110-11556110 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.946915;DP=2504;DP4=1295,1163,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.46311e-07;MQSB=0.918237;RPB=0.84606;SGB=32.5467;VDB=0.7861;EFF=INTRON(MODIFIER||||428|LOC_Os10g22350|protein_coding|CODING|LOC_Os10g22350.1|6|1) FN1709-S.SNP.10:11557286 chr10:011557286 0 W/11557286-11557286 FN1709-S SNP T -> A AC=2;AN=188;BQB=0.166354;DP=4113;DP4=2050,2014,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72901e-15;MQSB=0.996167;RPB=0.978584;SGB=66.7689;VDB=0.882223;EFF=INTRON(MODIFIER||||428|LOC_Os10g22350|protein_coding|CODING|LOC_Os10g22350.1|4|1) FN2692-S.SNP.10:11562726 chr10:011562726 0 W/11562726-11562726 FN2692-S SNP T -> A AC=1;AN=200;BQB=0.972231;DP=5313;DP4=2617,2462,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56561e-18;MQSB=0.992875;RPB=0.615605;SGB=58.1418;VDB=0.315851;EFF=INTERGENIC(MODIFIER||||||||||1) FN959-S.SNP.10:11563215 chr10:011563215 0 W/11563215-11563215 FN959-S Single Base Substitution G-A INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2454.SNP.10:11563235 chr10:011563235 0 W/11563235-11563235 FN2454 SNP C -> A AC=1;AN=200;BQB=0.482598;DP=5120;DP4=2010,2658,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58383e-14;MQSB=0.782733;RPB=0.999204;SGB=-5.84819;VDB=0.524433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.10:11568547 chr10:011568547 0 W/11568547-11568547 FN2324 SNP G -> A AC=1;AN=192;BQB=0.45429;DP=4405;DP4=2004,1943,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26801e-11;MQSB=0.477824;RPB=0.800808;SGB=41.7357;VDB=0.302099;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A83|201|LOC_Os10g22362|protein_coding|CODING|LOC_Os10g22362.1|1|1) FN3632-S.SNP.10:11575072 chr10:011575072 0 W/11575072-11575072 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.998969;DP=3085;DP4=1452,1524,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.04593e-10;MQSB=0.995191;RPB=0.968873;SGB=62.7569;VDB=0.861953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G500R|913|LOC_Os10g22370|protein_coding|CODING|LOC_Os10g22370.1|1|1) FN1229-S.SNP.10:11580977 chr10:011580977 0 W/11580977-11580977 FN1229-S Single Base Substitution T-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1414-S.SNP.10:11598033 chr10:011598033 0 W/11598033-11598033 FN1414-S Single Base Substitution G-C INTRON HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2214-S.SNP.10:11601017 chr10:011601017 0 W/11601017-11601017 FN2214-S SNP G -> A AC=2;AN=190;BQB=0.111374;DP=4506;DP4=2118,2099,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.70991e-27;MQSB=7.36877e-05;RPB=0.997568;SGB=142.717;VDB=0.00691273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.10:11601018 chr10:011601018 0 W/11601018-11601018 FN2214-S SNP G -> A AC=2;AN=190;BQB=0.991737;DP=4489;DP4=2117,2088,24,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.64321e-27;MQSB=5.18954e-05;RPB=0.847677;SGB=102.83;VDB=0.0245976;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.10:11601019 chr10:011601019 0 W/11601019-11601019 FN2214-S SNP C -> A AC=2;AN=190;BQB=0.643672;DP=4485;DP4=2060,2069,23,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.75174e-26;MQSB=3.30045e-05;RPB=0.98707;SGB=146.271;VDB=0.034109;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.10:11602886 chr10:011602886 0 W/11602886-11602886 FN681-S Single Base Substitution A-T INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1401-S.SNP.10:11609624 chr10:011609624 0 W/11609624-11609624 FN1401-S Single Base Substitution G-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. W42-1-3S-1.SNP.10:11615058 chr10:011615058 0 W/11615058-11615058 W42-1-3S-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN3509-S.SNP.10:11618013 chr10:011618013 0 W/11618013-11618013 FN3509-S SNP G -> A AC=1;AN=188;BQB=0.463209;DP=4061;DP4=1876,2108,8,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.93057e-12;MQSB=0.959431;RPB=0.204724;SGB=82.0471;VDB=0.36511;EFF=INTERGENIC(MODIFIER||||||||||1) FN-148.SNP.10:11619964 chr10:011619964 0 W/11619964-11619964 FN-148 Single Base Substitution T-C INTERGENIC HET SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2468.SNP.10:11637688 chr10:011637688 0 W/11637688-11637688 FN2468 SNP T -> A AC=2;AN=200;BQB=0.861846;DP=5276;DP4=2311,2559,12,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.42665e-13;MQSB=0.997554;RPB=0.430208;SGB=91.1059;VDB=0.581317;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.10:11641682 chr10:011641682 0 W/11641682-11641682 FN947-S Single Base Substitution A-T INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1485-S.SNP.10:11646154 chr10:011646154 0 W/11646154-11646154 FN1485-S Single Base Substitution C-T INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN1224-S.SNP.10:11652470 chr10:011652470 0 W/11652470-11652470 FN1224-S Single Base Substitution C-T INTRON HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1200-S.SNP.10:11660991 chr10:011660991 0 W/11660991-11660991 FN1200-S Single Base Substitution C-T INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2317.SNP.10:11663409 chr10:011663409 0 W/11663409-11663409 FN2317 SNP C -> T AC=2;AN=192;BQB=0.994286;DP=4696;DP4=2200,2265,18,10;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.09083e-15;MQSB=0.9402;RPB=0.979051;SGB=57.1218;VDB=0.817078;EFF=UTR_5_PRIME(MODIFIER||363||741|LOC_Os10g22510|protein_coding|CODING|LOC_Os10g22510.1|1|1) FN3543-S.SNP.10:11673261 chr10:011673261 0 W/11673261-11673261 FN3543-S SNP T -> C AC=1;AN=188;BQB=0.911116;DP=3229;DP4=1990,1058,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000165992;MQSB=0.0372339;RPB=0.666663;SGB=39.5276;VDB=0.788754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N63D|510|LOC_Os10g22520|protein_coding|CODING|LOC_Os10g22520.1|1|1) FN-52.SNP.10:11674568 chr10:011674568 0 W/11674568-11674568 FN-52 Single Base Substitution G-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN3696-S.SNP.10:11674643 chr10:011674643 0 W/11674643-11674643 FN3696-S SNP A -> T AC=1;AN=190;BQB=0.75054;DP=3355;DP4=1689,1547,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51293e-07;MQSB=0.972862;RPB=0.230536;SGB=50.3161;VDB=0.22261;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.10:11677147 chr10:011677147 0 W/11677147-11677147 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.854374;DP=4486;DP4=1973,2163,15,13;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.079358;MQB=0.985209;MQSB=1.5336e-11;RPB=0.474817;SGB=90.7419;VDB=0.0827609;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.10:11679274 chr10:011679274 0 W/11679274-11679274 FN760-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g22540 retrotransposon protein, putative, unclassified, expressed SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3824-S.SNP.10:11679870 chr10:011679870 0 W/11679870-11679870 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.287972;DP=2452;DP4=1227,1127,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00530179;MQB=0.000590455;MQSB=0.186621;RPB=0.662867;SGB=53.8699;VDB=0.16293;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P429|1074|LOC_Os10g22540|protein_coding|CODING|LOC_Os10g22540.1|1|1) FN1113-S.SNP.10:11683368 chr10:011683368 0 W/11683368-11683368 FN1113-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1266-S.SNP.10:11683368 chr10:011683368 0 W/11683368-11683368 FN1266-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN3767-S.SNP.10:11683368 chr10:011683368 0 W/11683368-11683368 FN3767-S SNP C -> T AC=2;AN=190;BQB=0.899768;DP=3149;DP4=1576,1467,16,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.00222293;MQB=1.35926e-08;MQSB=0.564826;RPB=0.99328;SGB=117.403;VDB=0.670917;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L1483|1772|LOC_Os10g22550|protein_coding|CODING|LOC_Os10g22550.1|5|1) FN3302-S.SNP.10:11685303 chr10:011685303 0 W/11685303-11685303 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.991316;DP=3908;DP4=1955,1863,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.98949e-05;MQSB=0.932906;RPB=0.83745;SGB=10.6662;VDB=0.853504;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L849|1772|LOC_Os10g22550|protein_coding|CODING|LOC_Os10g22550.1|4|1) FN424-S.SNP.10:11686857 chr10:011686857 0 W/11686857-11686857 FN424-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN_809-6-1.SNP.10:11689452 chr10:011689452 0 W/11689452-11689452 FN_809-6-1 Single Base Substitution G-T Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN2297.SNP.10:11690893 chr10:011690893 0 W/11690893-11690893 FN2297 SNP T -> G AC=1;AN=192;BQB=0.0514024;DP=5347;DP4=2925,1955,21,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000187021;MQB=1.02652e-12;MQSB=0.520297;RPB=0.989102;SGB=-68.8078;VDB=0.855625;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.10:11692510 chr10:011692510 0 W/11692510-11692510 FN3427-S SNP C -> T AC=2;AN=184;BQB=0.741146;DP=3176;DP4=1412,1668,9,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.20806e-12;MQSB=0.984657;RPB=0.914499;SGB=107.526;VDB=0.103609;EFF=INTRON(MODIFIER||||570|LOC_Os10g22560|protein_coding|CODING|LOC_Os10g22560.1|4|1),INTRON(MODIFIER||||570|LOC_Os10g22560|protein_coding|CODING|LOC_Os10g22560.2|6|1),INTRON(MODIFIER||||570|LOC_Os10g22560|protein_coding|CODING|LOC_Os10g22560.3|5|1) FN1011-S.SNP.10:11709474 chr10:011709474 0 W/11709474-11709474 FN1011-S Single Base Substitution A-C INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN-381.SNP.10:11711318 chr10:011711318 0 W/11711318-11711318 FN-381 Single Base Substitution T-A INTRON HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN949-S.SNP.10:11730512 chr10:011730512 0 W/11730512-11730512 FN949-S Single Base Substitution T-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN2247-S.SNP.10:11736968 chr10:011736968 0 W/11736968-11736968 FN2247-S SNP C -> T AC=1;AN=190;BQB=0.971119;DP=3674;DP4=1201,2151,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000272183;MQB=4.89216e-10;MQSB=0.365187;RPB=0.310296;SGB=71.8647;VDB=0.897421;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.10:11736968 chr10:011736968 0 W/11736968-11736968 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.944308;DP=1532;DP4=350,1133,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77665e-06;MQSB=0.200605;RPB=0.950383;SGB=24.4556;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.10:11743244 chr10:011743244 0 W/11743244-11743244 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.841405;DP=3109;DP4=1381,1622,10,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.07774e-17;MQSB=0.941107;RPB=0.614565;SGB=116.569;VDB=0.844752;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G4|184|LOC_Os10g22610|protein_coding|CODING|LOC_Os10g22610.1|1|1) FN1024-S.SNP.10:11743618 chr10:011743618 0 W/11743618-11743618 FN1024-S Single Base Substitution A-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2179-S.SNP.10:11743659 chr10:011743659 0 W/11743659-11743659 FN2179-S SNP C -> A AC=1;AN=168;BQB=0.502678;DP=2562;DP4=1705,815,14,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.1691e-09;MQSB=0.713072;RPB=0.600064;SGB=7.05233;VDB=0.487151;EFF=INTERGENIC(MODIFIER||||||||||1) FN3860-S.SNP.10:11753752 chr10:011753752 0 W/11753752-11753752 FN3860-S SNP A -> T AC=1;AN=158;BQB=0.41995;DP=2295;DP4=1167,1067,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.10568e-09;MQSB=0.728717;RPB=0.563129;SGB=30.927;VDB=0.690444;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.10:11755808 chr10:011755808 0 W/11755808-11755808 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.204956;DP=3411;DP4=1832,1541,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.36794e-09;MQSB=0.967218;RPB=0.684645;SGB=-13.6493;VDB=0.205334;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.10:11763009 chr10:011763009 0 W/11763009-11763009 FN3505-S SNP T -> A AC=1;AN=188;BQB=0.89399;DP=3187;DP4=1569,1531,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0;MQB=2.20796e-08;MQSB=0.998749;RPB=0.491068;SGB=58.0655;VDB=0.389964;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.10:11782092 chr10:011782092 0 W/11782092-11782092 FN1314-S Single Base Substitution C-T INTERGENIC HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-333.SNP.10:11783731 chr10:011783731 0 W/11783731-11783731 FN-333 Single Base Substitution G-A INTERGENIC HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN899-S.SNP.10:11784218 chr10:011784218 0 W/11784218-11784218 FN899-S Single Base Substitution G-C INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN899-S.SNP.10:11784219 chr10:011784219 0 W/11784219-11784219 FN899-S Single Base Substitution A-G INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2268-S.SNP.10:11797819 chr10:011797819 0 W/11797819-11797819 FN2268-S SNP C -> G AC=1;AN=190;BQB=0.962643;DP=4302;DP4=1970,2108,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.41685e-11;MQSB=0.562251;RPB=0.409102;SGB=11.8805;VDB=0.337235;EFF=INTRON(MODIFIER||||474|LOC_Os10g22710|protein_coding|CODING|LOC_Os10g22710.1|1|1) FN911-S.SNP.10:11798578 chr10:011798578 0 W/11798578-11798578 FN911-S Single Base Substitution A-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3809-S.SNP.10:11803046 chr10:011803046 0 W/11803046-11803046 FN3809-S SNP T -> C AC=1;AN=190;BQB=0.630095;DP=2725;DP4=1131,1451,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0102752;MQB=0.000710433;MQSB=0.00339842;RPB=0.916998;SGB=44.5415;VDB=0.401428;EFF=INTRON(MODIFIER||||263|LOC_Os10g22720|protein_coding|CODING|LOC_Os10g22720.1|1|1) FN880-S.SNP.10:11803222 chr10:011803222 0 W/11803222-11803222 FN880-S Single Base Substitution A-T INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3554-S.SNP.10:11805623 chr10:011805623 0 W/11805623-11805623 FN3554-S SNP T -> C AC=1;AN=188;BQB=0.362565;DP=2676;DP4=1458,1122,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18388e-07;MQSB=0.975202;RPB=0.142547;SGB=50.1574;VDB=0.000126833;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.10:11818763 chr10:011818763 0 W/11818763-11818763 FN-218 Single Base Substitution G-A INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3436-S.SNP.10:11833038 chr10:011833038 0 W/11833038-11833038 FN3436-S SNP C -> G AC=1;AN=184;BQB=0.979577;DP=2969;DP4=1350,1527,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.19268e-13;MQSB=0.642488;RPB=0.99917;SGB=70.9657;VDB=0.865152;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.10:11837623 chr10:011837623 0 W/11837623-11837623 FN922-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g22770 expressed protein SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1515-S.SNP.10:11837701 chr10:011837701 0 W/11837701-11837701 FN1515-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g22770 expressed protein SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN1297-S.SNP.10:11843143 chr10:011843143 0 W/11843143-11843143 FN1297-S Single Base Substitution C-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1249-S.SNP.10:11844930 chr10:011844930 0 W/11844930-11844930 FN1249-S Single Base Substitution T-A INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN3502-S.SNP.10:11845146 chr10:011845146 0 W/11845146-11845146 FN3502-S SNP G -> A AC=2;AN=188;BQB=0.995719;DP=3748;DP4=1842,1776,17,11;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.169424;MQB=0.945622;MQSB=0;RPB=0.743039;SGB=121.672;VDB=0.373822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.10:11847662 chr10:011847662 0 W/11847662-11847662 FN3422-S SNP G -> A AC=1;AN=184;BQB=0.975485;DP=3004;DP4=1347,1591,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58042e-06;MQSB=0.951052;RPB=0.991742;SGB=44.2207;VDB=0.980844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T395M|467|LOC_Os10g22800|protein_coding|CODING|LOC_Os10g22800.1|4|1) FN-219.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN-219 Single Base Substitution C-T INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN-263.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN-263 Single Base Substitution C-T INTERGENIC HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN-393.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN-393 Single Base Substitution C-T INTERGENIC HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN1210-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN1210-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN1448-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN1448-S Single Base Substitution C-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1738-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN1738-S SNP C -> T AC=1;AN=188;BQB=0.605974;DP=2717;DP4=1266,1401,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.70276e-10;MQSB=0.964817;RPB=0.893396;SGB=14.798;VDB=0.752883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN3662-S SNP C -> T AC=1;AN=190;BQB=0.0559391;DP=2926;DP4=1349,1426,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00024969;MQSB=0.907869;RPB=0.765013;SGB=26.2136;VDB=0.659911;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN3761-S SNP C -> T AC=2;AN=190;BQB=0.213553;DP=2958;DP4=1440,1364,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.6992e-07;MQSB=0.999973;RPB=0.664387;SGB=71.6393;VDB=0.996951;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN3868-S SNP C -> T AC=2;AN=158;BQB=0.777986;DP=2520;DP4=1177,1231,5,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.73188e-06;MQSB=0.83539;RPB=0.793738;SGB=60.1755;VDB=0.349404;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN4124-S SNP C -> T AC=1;AN=182;BQB=0.946356;DP=3162;DP4=1469,1579,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.6165e-08;MQSB=0.987429;RPB=0.225987;SGB=66.6657;VDB=0.0818182;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN428-S Single Base Substitution C-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN547-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN547-S Single Base Substitution C-T INTERGENIC HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN577-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN577-S Single Base Substitution C-T INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN624-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN624-S Single Base Substitution C-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN736-S.SNP.10:11852717 chr10:011852717 0 W/11852717-11852717 FN736-S Single Base Substitution C-T INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN417-S.SNP.10:11857914 chr10:011857914 0 W/11857914-11857914 FN417-S Single Base Substitution C-T INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2477.SNP.10:11861501 chr10:011861501 0 W/11861501-11861501 FN2477 SNP C -> A AC=1;AN=200;BQB=0.881402;DP=4916;DP4=2572,2113,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.82182e-11;MQSB=0.694509;RPB=0.990191;SGB=58.2954;VDB=0.893836;EFF=INTRON(MODIFIER||||126|LOC_Os10g22820|protein_coding|CODING|LOC_Os10g22820.1|1|1) FN2455.SNP.10:11866018 chr10:011866018 0 W/11866018-11866018 FN2455 SNP G -> A AC=1;AN=200;BQB=0.922764;DP=4581;DP4=2088,2152,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.13858e-09;MQSB=0.334475;RPB=0.906659;SGB=58.8698;VDB=0.406196;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.10:11876774 chr10:011876774 0 W/11876774-11876774 FN3296-S SNP G -> T AC=1;AN=184;BQB=0.997051;DP=3914;DP4=1800,2025,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.42553e-12;MQSB=0.997755;RPB=0.482492;SGB=89.4385;VDB=0.14213;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D59Y|147|LOC_Os10g22850|protein_coding|CODING|LOC_Os10g22850.1|1|1) FN389-S.SNP.10:11892183 chr10:011892183 0 W/11892183-11892183 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN714-S.SNP.10:11895728 chr10:011895728 0 W/11895728-11895728 FN714-S Single Base Substitution A-C INTRON HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN2105-S.SNP.10:11897729 chr10:011897729 0 W/11897729-11897729 FN2105-S SNP A -> T AC=1;AN=168;BQB=0.196838;DP=3426;DP4=1861,1506,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.64859e-12;MQSB=0.97675;RPB=0.995014;SGB=18.4989;VDB=0.90457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N424I|1061|LOC_Os10g22890|protein_coding|CODING|LOC_Os10g22890.1|3|1) FN2541-S.SNP.10:11903794 chr10:011903794 0 W/11903794-11903794 FN2541-S SNP T -> G AC=1;AN=198;BQB=0.999204;DP=3996;DP4=1988,1776,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00125125;MQB=7.32997e-11;MQSB=8.42279e-05;RPB=0.595417;SGB=79.6954;VDB=0.411796;EFF=INTERGENIC(MODIFIER||||||||||1) FN943-S.SNP.10:11905849 chr10:011905849 0 W/11905849-11905849 FN943-S Single Base Substitution G-T INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. 705-6.SNP.10:11907534 chr10:011907534 0 W/11907534-11907534 705-6 Single Base Substitution T-C INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN601-S.SNP.10:11921231 chr10:011921231 0 W/11921231-11921231 FN601-S Single Base Substitution C-T INTERGENIC HET SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1258-S.SNP.10:11927853 chr10:011927853 0 W/11927853-11927853 FN1258-S Single Base Substitution G-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN-190.SNP.10:11929264 chr10:011929264 0 W/11929264-11929264 FN-190 Single Base Substitution G-A INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1633-S.SNP.10:11961727 chr10:011961727 0 W/11961727-11961727 FN1633-S Single Base Substitution G-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1633-S.SNP.10:11961729 chr10:011961729 0 W/11961729-11961729 FN1633-S Single Base Substitution G-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2731-S.SNP.10:11962310 chr10:011962310 0 W/11962310-11962310 FN2731-S SNP G -> A AC=1;AN=200;BQB=0.976806;DP=4496;DP4=2157,2001,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11141e-10;MQSB=0.991738;RPB=0.979739;SGB=72.6852;VDB=0.850895;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.10:11968740 chr10:011968740 0 W/11968740-11968740 FN2449 SNP C -> G AC=1;AN=200;BQB=0.577931;DP=4677;DP4=2248,2055,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.86952e-13;MQSB=0.950003;RPB=0.549112;SGB=42.5108;VDB=0.961331;EFF=INTERGENIC(MODIFIER||||||||||1) FN3980-S.SNP.10:11974636 chr10:011974636 0 W/11974636-11974636 FN3980-S SNP A -> C AC=1;AN=168;BQB=0.279169;DP=2916;DP4=1303,1479,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.62243e-05;MQSB=0.997873;RPB=0.897249;SGB=-17.9574;VDB=0.762846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.10:11977648 chr10:011977648 0 W/11977648-11977648 FN1012-S Single Base Substitution G-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2630-S.SNP.10:11988911 chr10:011988911 0 W/11988911-11988911 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.838756;DP=5078;DP4=2416,2413,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76494e-14;MQSB=0.992161;RPB=0.620436;SGB=22.3313;VDB=0.464234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3662-S.SNP.10:11990740 chr10:011990740 0 W/11990740-11990740 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.622556;DP=2633;DP4=1600,945,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.13602e-05;MQSB=0.902751;RPB=0.670243;SGB=35.4339;VDB=0.889084;EFF=INTERGENIC(MODIFIER||||||||||1) FN4155-S.SNP.10:11992876 chr10:011992876 0 W/11992876-11992876 FN4155-S SNP G -> C AC=1;AN=170;BQB=0.982074;DP=2317;DP4=1094,1155,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.91246e-08;MQSB=0.996682;RPB=0.514841;SGB=47.8722;VDB=0.990679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.10:11997553 chr10:011997553 0 W/11997553-11997553 FN1241-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN4175-S.SNP.10:11997596 chr10:011997596 0 W/11997596-11997596 FN4175-S SNP A -> G AC=2;AN=170;BQB=0.964917;DP=2331;DP4=1065,1191,5,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.26104e-12;MQSB=0.967824;RPB=0.906498;SGB=83.4133;VDB=0.702108;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.10:11999998 chr10:011999998 0 W/11999998-11999998 W443-5-1-3 Single Base Substitution T-A INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN-400.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN-400 Single Base Substitution T-A INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN-408.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN-408 Single Base Substitution T-A INTERGENIC HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN2239-S.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN2239-S SNP T -> A AC=2;AN=190;BQB=0.838893;DP=4208;DP4=1604,2175,16,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.34102e-17;MQSB=0.0758139;RPB=0.947416;SGB=121.394;VDB=0.66695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN2372 SNP T -> A AC=1;AN=192;BQB=0.643136;DP=4365;DP4=1803,2167,13,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.4559e-14;MQSB=0.410101;RPB=0.949252;SGB=67.3792;VDB=0.435316;EFF=INTERGENIC(MODIFIER||||||||||1) FN408-S.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN408-S Single Base Substitution T-A INTERGENIC HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN472-S.SNP.10:12001228 chr10:012001228 0 W/12001228-12001228 FN472-S Single Base Substitution T-A INTERGENIC HOMO SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN750-S.SNP.10:12003327 chr10:012003327 0 W/12003327-12003327 FN750-S Single Base Substitution A-G INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN3563-S.SNP.10:12020049 chr10:012020049 0 W/12020049-12020049 FN3563-S SNP T -> A AC=1;AN=188;BQB=0.988708;DP=2859;DP4=1576,1151,20,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.11977e-22;MQSB=0.995146;RPB=0.998416;SGB=74.3988;VDB=0.904011;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.10:12020050 chr10:012020050 0 W/12020050-12020050 FN3563-S SNP T -> A AC=1;AN=188;BQB=0.999437;DP=2856;DP4=1557,1175,19,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.48553e-20;MQSB=0.999232;RPB=0.978765;SGB=69.3122;VDB=0.770441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.10:12026396 chr10:012026396 0 W/12026396-12026396 FN1339-S Single Base Substitution A-G INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3776-S.SNP.10:12032087 chr10:012032087 0 W/12032087-12032087 FN3776-S SNP A -> G AC=1;AN=190;BQB=0.90068;DP=3044;DP4=1467,1485,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.26072e-09;MQSB=0.997266;RPB=0.966071;SGB=53.8699;VDB=0.281015;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.10:12037228 chr10:012037228 0 W/12037228-12037228 FN723-S Single Base Substitution G-A INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN2629-S.SNP.10:12041952 chr10:012041952 0 W/12041952-12041952 FN2629-S SNP T -> C AC=1;AN=200;BQB=0.990887;DP=4979;DP4=2146,2622,13,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13226e-21;MQSB=0.673855;RPB=0.85295;SGB=-2.82234;VDB=0.584193;EFF=UTR_5_PRIME(MODIFIER||118||281|LOC_Os10g23090|protein_coding|CODING|LOC_Os10g23090.2|1|1),INTRON(MODIFIER||||305|LOC_Os10g23090|protein_coding|CODING|LOC_Os10g23090.1|1|1) FN2725-S.SNP.10:12051403 chr10:012051403 0 W/12051403-12051403 FN2725-S SNP T -> A AC=2;AN=200;BQB=0.47592;DP=5074;DP4=2437,2408,27,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.51661e-27;MQSB=0.946547;RPB=0.999984;SGB=148.425;VDB=0.18189;EFF=INTRON(MODIFIER||||216|LOC_Os10g23100|protein_coding|CODING|LOC_Os10g23100.1|1|1) FN-196.SNP.10:12054690 chr10:012054690 0 W/12054690-12054690 FN-196 Single Base Substitution G-T INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1496-S.SNP.10:12056414 chr10:012056414 0 W/12056414-12056414 FN1496-S Single Base Substitution C-A SPLICE_SITE_REGION Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1080-S.SNP.10:12057585 chr10:012057585 0 W/12057585-12057585 FN1080-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os10g23110 retrotransposon protein, putative, unclassified, expressed SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-339.SNP.10:12061863 chr10:012061863 0 W/12061863-12061863 FN-339 Single Base Substitution A-T INTRON HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN2542-S.SNP.10:12079542 chr10:012079542 0 W/12079542-12079542 FN2542-S SNP T -> C AC=1;AN=198;BQB=0.983607;DP=3989;DP4=1925,1894,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.90982e-13;MQSB=0.286447;RPB=0.97099;SGB=68.91;VDB=0.232648;EFF=INTRON(MODIFIER||||131|LOC_Os10g23130|protein_coding|CODING|LOC_Os10g23130.1|2|1) FN934-S.SNP.10:12080360 chr10:012080360 0 W/12080360-12080360 FN934-S Single Base Substitution G-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2558-S.SNP.10:12090595 chr10:012090595 0 W/12090595-12090595 FN2558-S SNP T -> A AC=2;AN=198;BQB=0.709049;DP=4615;DP4=2030,2141,33,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.5975e-29;MQSB=0.98761;RPB=0.845465;SGB=140.934;VDB=0.301334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N477I|501|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N386I|410|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.2|5|1) FN2445.SNP.10:12098250 chr10:012098250 0 W/12098250-12098250 FN2445 SNP A -> T AC=1;AN=200;BQB=0.548496;DP=4745;DP4=2182,1901,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210748;MQB=2.23501e-06;MQSB=0.721716;RPB=0.15523;SGB=-59.7054;VDB=0.476625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F78Y|501|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F78Y|410|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F78Y|357|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.3|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F78Y|344|LOC_Os10g23180|protein_coding|CODING|LOC_Os10g23180.4|1|1) FN4082-S.SNP.10:12099506 chr10:012099506 0 W/12099506-12099506 FN4082-S SNP G -> C AC=1;AN=182;BQB=0.61041;DP=2087;DP4=841,1139,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.66707e-08;MQSB=0.949569;RPB=0.981177;SGB=39.1386;VDB=0.419688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3459-S.SNP.10:12100117 chr10:012100117 0 W/12100117-12100117 FN3459-S SNP A -> T AC=1;AN=184;BQB=0.996865;DP=2729;DP4=1485,1171,4,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000118697;MQSB=0.996921;RPB=0.544528;SGB=26.1347;VDB=0.900235;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.10:12101135 chr10:012101135 0 W/12101135-12101135 FN1606-S Single Base Substitution G-A INTERGENIC Homo SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2169-S.SNP.10:12101135 chr10:012101135 0 W/12101135-12101135 FN2169-S SNP G -> A AC=2;AN=168;BQB=7.75179e-07;DP=2796;DP4=1462,1285,9,19;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=5.67431e-08;MQSB=6.97024e-11;RPB=0.635152;SGB=-108.339;VDB=0.310941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.10:12101135 chr10:012101135 0 W/12101135-12101135 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.999873;DP=4679;DP4=2377,2025,13,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.52713e-10;MQSB=0.00100137;RPB=0.447869;SGB=20.7261;VDB=0.209135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.10:12101135 chr10:012101135 0 W/12101135-12101135 FN3979-S SNP G -> A AC=2;AN=168;BQB=0.0515442;DP=2510;DP4=1393,958,24,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.14859e-07;MQSB=0.00993626;RPB=0.720981;SGB=70.8011;VDB=0.469095;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.10:12101135 chr10:012101135 0 W/12101135-12101135 FN488-S Single Base Substitution G-A INTERGENIC HOMO SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2441.SNP.10:12102090 chr10:012102090 0 W/12102090-12102090 FN2441 SNP C -> T AC=1;AN=200;BQB=0.0865759;DP=4526;DP4=2277,1989,9,9;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00684932;MQB=0.0294901;MQSB=4.30992e-09;RPB=0.546823;SGB=-13.1102;VDB=0.898702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R615K|923|LOC_Os10g23190|protein_coding|CODING|LOC_Os10g23190.1|3|1) FN2180-S.SNP.10:12116771 chr10:012116771 0 W/12116771-12116771 FN2180-S SNP C -> T AC=2;AN=190;BQB=0.99698;DP=4688;DP4=2152,2180,28,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.55592e-25;MQSB=0.601917;RPB=0.258821;SGB=63.1584;VDB=0.119159;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.10:12117486 chr10:012117486 0 W/12117486-12117486 FN1563-S Single Base Substitution G-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3541-S.SNP.10:12122525 chr10:012122525 0 W/12122525-12122525 FN3541-S SNP C -> T AC=1;AN=188;BQB=0.934488;DP=2672;DP4=1241,1352,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.82424e-08;MQSB=0.999021;RPB=0.652403;SGB=58.0655;VDB=0.389015;EFF=INTERGENIC(MODIFIER||||||||||1) FN-33.SNP.10:12127673 chr10:012127673 0 W/12127673-12127673 FN-33 Single Base Substitution G-A INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN1227-S.SNP.10:12127743 chr10:012127743 0 W/12127743-12127743 FN1227-S Single Base Substitution G-C INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-197.SNP.10:12129078 chr10:012129078 0 W/12129078-12129078 FN-197 Single Base Substitution C-T INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN1142-S.SNP.10:12134604 chr10:012134604 0 W/12134604-12134604 FN1142-S Single Base Substitution C-T INTRON HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2619-S.SNP.10:12146492 chr10:012146492 0 W/12146492-12146492 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.8043;DP=4224;DP4=1938,2031,16,26;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.31641e-25;MQSB=0.987147;RPB=0.589752;SGB=187.402;VDB=0.479099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.10:12146881 chr10:012146881 0 W/12146881-12146881 FN2247-S SNP G -> A AC=1;AN=190;BQB=0.0707507;DP=5113;DP4=2448,2337,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.02174e-07;MQSB=0.969436;RPB=0.960927;SGB=21.1058;VDB=0.273048;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S288L|326|LOC_Os10g23270|protein_coding|CODING|LOC_Os10g23270.1|3|1) FN-36.SNP.10:12147404 chr10:012147404 0 W/12147404-12147404 FN-36 Single Base Substitution C-T INTRON Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1737-S.SNP.10:12147670 chr10:012147670 0 W/12147670-12147670 FN1737-S SNP T -> C AC=1;AN=188;BQB=0.165184;DP=3530;DP4=1478,2013,7,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.76166e-09;MQSB=0.995054;RPB=0.978227;SGB=11.7114;VDB=0.886317;EFF=INTRON(MODIFIER||||326|LOC_Os10g23270|protein_coding|CODING|LOC_Os10g23270.1|2|1) FN2781-S.SNP.10:12171661 chr10:012171661 0 W/12171661-12171661 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.997504;DP=3553;DP4=1633,1686,2,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.31287e-10;MQSB=0.753338;RPB=0.976911;SGB=63.3342;VDB=0.857158;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.10:12173160 chr10:012173160 0 W/12173160-12173160 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.848439;DP=4342;DP4=2189,1807,21,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.73761e-16;MQSB=0.992575;RPB=0.605449;SGB=132.261;VDB=0.451226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.10:12173287 chr10:012173287 0 W/12173287-12173287 FN3794-S SNP T -> G AC=1;AN=190;BQB=0.999915;DP=2302;DP4=1047,1148,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000434405;MQB=3.41654e-06;MQSB=0.981373;RPB=0.671121;SGB=13.4442;VDB=0.0771861;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.10:12173698 chr10:012173698 0 W/12173698-12173698 FN1485-S Single Base Substitution G-A INTERGENIC Homo SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN419-S.SNP.10:12179258 chr10:012179258 0 W/12179258-12179258 FN419-S Single Base Substitution A-C INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2779-S.SNP.10:12183496 chr10:012183496 0 W/12183496-12183496 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.853195;DP=4482;DP4=2142,2054,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.87561e-16;MQSB=0.998155;RPB=0.986543;SGB=86.8856;VDB=0.617903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.10:12186064 chr10:012186064 0 W/12186064-12186064 FN1039-S Single Base Substitution G-A INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN3662-S.SNP.10:12191461 chr10:012191461 0 W/12191461-12191461 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.721074;DP=2513;DP4=1267,1156,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000444542;MQSB=0.995389;RPB=0.49783;SGB=35.4339;VDB=0.617041;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.10:12201047 chr10:012201047 0 W/12201047-12201047 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.999912;DP=2839;DP4=1381,1362,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.62191e-07;MQSB=0.797238;RPB=0.638769;SGB=36.1006;VDB=0.962315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.10:12205360 chr10:012205360 0 W/12205360-12205360 FN1252-S Single Base Substitution T-C INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN-361.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN-361 Single Base Substitution T-C INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN-70.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN-70 Single Base Substitution T-C INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1067-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN1067-S Single Base Substitution T-C INTERGENIC HOMO SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1216-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN1216-S Single Base Substitution T-C INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1399-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN1399-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1545-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN1545-S Single Base Substitution T-C INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2473.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN2473 SNP T -> C AC=2;AN=200;BQB=0.833688;DP=4241;DP4=2020,1984,14,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.716e-11;MQSB=0.907594;RPB=0.919642;SGB=104.921;VDB=0.789092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN2730-S SNP T -> C AC=2;AN=200;BQB=0.656963;DP=4551;DP4=2130,2232,17,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.14857e-17;MQSB=0.944741;RPB=0.754745;SGB=123.342;VDB=0.61259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN3569-S SNP T -> C AC=1;AN=188;BQB=0.999861;DP=2843;DP4=1497,1249,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.58246e-08;MQSB=0.970994;RPB=0.912729;SGB=39.5276;VDB=0.603564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN3940-S SNP T -> C AC=2;AN=158;BQB=0.947013;DP=2290;DP4=1078,1088,14,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.5224e-15;MQSB=0.999656;RPB=0.999914;SGB=81.2457;VDB=0.545649;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN417-S Single Base Substitution T-C INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN561-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN561-S Single Base Substitution T-C INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN619-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN619-S Single Base Substitution T-C INTERGENIC HET SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN721-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN721-S Single Base Substitution T-C INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN796-S.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 FN796-S Single Base Substitution T-C INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. W674-4-1.SNP.10:12206886 chr10:012206886 0 W/12206886-12206886 W674-4-1 Single Base Substitution T-C INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. W443-5-1-3.SNP.10:12210183 chr10:012210183 0 W/12210183-12210183 W443-5-1-3 Single Base Substitution T-A INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN-269.SNP.10:12211294 chr10:012211294 0 W/12211294-12211294 FN-269 Single Base Substitution C-T INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2107-S.SNP.10:12211415 chr10:012211415 0 W/12211415-12211415 FN2107-S SNP C -> T AC=2;AN=168;BQB=0.893494;DP=2777;DP4=1231,1488,19,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.13993e-16;MQSB=0.940773;RPB=0.635691;SGB=29.9454;VDB=0.0206674;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.10:12212715 chr10:012212715 0 W/12212715-12212715 FN1625-S Single Base Substitution C-T INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.10:12212715 chr10:012212715 0 W/12212715-12212715 FN1626-S SNP C -> T AC=2;AN=188;BQB=0.98301;DP=1080;DP4=365,662,10,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.70459e-08;MQSB=0.87291;RPB=0.285645;SGB=46.8164;VDB=0.402468;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN-114 Single Base Substitution G-A INTERGENIC HOMO SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN-3.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN-3 Single Base Substitution G-A INTERGENIC Homo SNo: 3, Mutant_ID: FN-3, Generation: M2, Mutations: 22, Genes: 29, Seed availability: Yes. FN1288-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN1288-S Single Base Substitution G-A INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1356-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN1356-S Single Base Substitution G-A INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1670-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN1670-S SNP G -> A AC=1;AN=188;BQB=0.864537;DP=1434;DP4=993,376,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000470007;MQSB=0.0498795;RPB=0.97884;SGB=25.3545;VDB=0.140618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.668235;DP=1894;DP4=899,881,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.41731e-12;MQSB=0.368657;RPB=0.477098;SGB=94.6341;VDB=0.605821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN3862-S SNP G -> A AC=1;AN=158;BQB=0.952725;DP=2164;DP4=893,1173,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.98479e-05;MQSB=0.244131;RPB=0.77011;SGB=47.0672;VDB=0.696154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.91517;DP=1920;DP4=842,971,9,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.384e-11;MQSB=0.0876377;RPB=0.924631;SGB=100.912;VDB=0.0296415;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN467-S Single Base Substitution G-A INTERGENIC HET SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_N1-213-1.SNP.10:12213495 chr10:012213495 0 W/12213495-12213495 FN_N1-213-1 Single Base Substitution G-A HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN4089-S.SNP.10:12213831 chr10:012213831 0 W/12213831-12213831 FN4089-S SNP G -> A AC=2;AN=182;BQB=0.766905;DP=2651;DP4=1456,1083,19,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.58176e-19;MQSB=0.776383;RPB=0.870856;SGB=105.845;VDB=0.745242;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.10:12213832 chr10:012213832 0 W/12213832-12213832 FN4089-S SNP G -> A AC=2;AN=182;BQB=0.871695;DP=2650;DP4=1463,1096,19,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.47653e-20;MQSB=0.76732;RPB=0.993277;SGB=138.839;VDB=0.666817;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.10:12222867 chr10:012222867 0 W/12222867-12222867 FN431-S Single Base Substitution C-T INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN462-S.SNP.10:12223828 chr10:012223828 0 W/12223828-12223828 FN462-S Single Base Substitution T-A INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2104-S.SNP.10:12225739 chr10:012225739 0 W/12225739-12225739 FN2104-S SNP C -> T AC=2;AN=168;BQB=0.479964;DP=2351;DP4=1012,1303,1,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.98567e-06;MQSB=0.968756;RPB=0.204945;SGB=12.4615;VDB=0.0107754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3733-S.SNP.10:12228713 chr10:012228713 0 W/12228713-12228713 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.789112;DP=3232;DP4=1542,1520,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.25354e-12;MQSB=0.767434;RPB=0.725306;SGB=85.5263;VDB=0.384967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.10:12229973 chr10:012229973 0 W/12229973-12229973 FN1748-S SNP G -> A AC=1;AN=188;BQB=0.424059;DP=2133;DP4=1347,745,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.56288e-05;MQSB=0.958838;RPB=0.401759;SGB=-14.9998;VDB=0.116311;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.10:12232031 chr10:012232031 0 W/12232031-12232031 FN824-S Single Base Substitution C-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1034-S.SNP.10:12233589 chr10:012233589 0 W/12233589-12233589 FN1034-S Single Base Substitution C-T INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN-151.SNP.10:12235281 chr10:012235281 0 W/12235281-12235281 FN-151 Single Base Substitution T-A INTERGENIC HOMO SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2165-S.SNP.10:12235998 chr10:012235998 0 W/12235998-12235998 FN2165-S SNP T -> A AC=2;AN=168;BQB=0.570059;DP=2938;DP4=1695,1178,21,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.74176e-17;MQSB=0.803544;RPB=0.326091;SGB=-134.031;VDB=0.537573;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.10:12239955 chr10:012239955 0 W/12239955-12239955 FN4074-S SNP A -> T AC=1;AN=182;BQB=0.996294;DP=3180;DP4=1493,1610,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.27835e-10;MQSB=0.998949;RPB=0.743789;SGB=53.182;VDB=0.685519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C75S|237|LOC_Os10g23870|protein_coding|CODING|LOC_Os10g23870.1|2|1) FN4040-S.SNP.10:12241936 chr10:012241936 0 W/12241936-12241936 FN4040-S SNP T -> G AC=1;AN=168;BQB=0.975846;DP=2754;DP4=1363,1190,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=2.48868e-06;MQSB=0.360381;RPB=0.768152;SGB=14.8923;VDB=0.264813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.10:12242054 chr10:012242054 0 W/12242054-12242054 FN1441-S Single Base Substitution G-A INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN579-S.SNP.10:12243697 chr10:012243697 0 W/12243697-12243697 FN579-S Single Base Substitution C-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2142-S.SNP.10:12252928 chr10:012252928 0 W/12252928-12252928 FN2142-S SNP T -> G AC=1;AN=168;BQB=0.024407;DP=3491;DP4=1588,1854,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.65913e-09;MQSB=0.982407;RPB=0.614326;SGB=-144.333;VDB=0.900795;EFF=INTRON(MODIFIER||||84|LOC_Os10g23884|protein_coding|CODING|LOC_Os10g23884.1|2|1) FN3857-S.SNP.10:12261156 chr10:012261156 0 W/12261156-12261156 FN3857-S SNP G -> T AC=2;AN=158;BQB=0.952631;DP=2708;DP4=1367,1244,16,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.0053e-12;MQSB=0.932266;RPB=0.839;SGB=108.239;VDB=0.89541;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L365|526|LOC_Os10g23900|protein_coding|CODING|LOC_Os10g23900.1|1|1) FN-131.SNP.10:12266152 chr10:012266152 0 W/12266152-12266152 FN-131 Single Base Substitution G-C INTERGENIC HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN-370.SNP.10:12279754 chr10:012279754 0 W/12279754-12279754 FN-370 Single Base Substitution G-A INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3670-S.SNP.10:12284961 chr10:012284961 0 W/12284961-12284961 FN3670-S SNP A -> G AC=2;AN=190;BQB=0.824618;DP=3036;DP4=1371,1524,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.42716e-11;MQSB=0.898716;RPB=0.810374;SGB=56.8601;VDB=0.996396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.10:12286357 chr10:012286357 0 W/12286357-12286357 FN2217-S SNP T -> C AC=1;AN=190;BQB=0.999999;DP=5675;DP4=2267,2995,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0685463;MQB=0.117317;MQSB=2.72261e-39;RPB=0.942174;SGB=39.6545;VDB=0.611175;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H9R|234|LOC_Os10g23950|protein_coding|CODING|LOC_Os10g23950.1|1|1) FN627-S.SNP.10:12288463 chr10:012288463 0 W/12288463-12288463 FN627-S Single Base Substitution T-C INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3354-S.SNP.10:12288640 chr10:012288640 0 W/12288640-12288640 FN3354-S SNP T -> A AC=1;AN=184;BQB=0.905401;DP=3207;DP4=1624,1448,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.95489e-06;MQSB=0.997029;RPB=0.965512;SGB=35.1773;VDB=0.290164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.10:12288641 chr10:012288641 0 W/12288641-12288641 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.975285;DP=3201;DP4=1642,1463,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.51859e-05;MQSB=0.997418;RPB=0.994444;SGB=30.6558;VDB=0.283405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.10:12288830 chr10:012288830 0 W/12288830-12288830 FN1119-S Single Base Substitution C-T INTERGENIC HOMO SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2264-S.SNP.10:12290246 chr10:012290246 0 W/12290246-12290246 FN2264-S SNP C -> T AC=1;AN=190;BQB=0.191632;DP=3657;DP4=2122,1209,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00601586;MQB=1.43715e-05;MQSB=7.12843e-08;RPB=0.694684;SGB=-34.9861;VDB=0.997343;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L145|175|LOC_Os10g23980|protein_coding|CODING|LOC_Os10g23980.1|2|1) FN3282-S.SNP.10:12295591 chr10:012295591 0 W/12295591-12295591 FN3282-S SNP G -> C AC=1;AN=184;BQB=0.938541;DP=2566;DP4=1091,1362,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.34364e-08;MQSB=0.98755;RPB=0.999893;SGB=48.7425;VDB=0.783145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3282-S.SNP.10:12295592 chr10:012295592 0 W/12295592-12295592 FN3282-S SNP C -> A AC=1;AN=184;BQB=0.760008;DP=2555;DP4=1119,1351,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.24053e-09;MQSB=0.999153;RPB=0.956656;SGB=35.7479;VDB=0.821212;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.10:12300840 chr10:012300840 0 W/12300840-12300840 FN747-S Single Base Substitution C-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN919-S.SNP.10:12300840 chr10:012300840 0 W/12300840-12300840 FN919-S Single Base Substitution C-T INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN3738-S.SNP.10:12303422 chr10:012303422 0 W/12303422-12303422 FN3738-S SNP C -> T AC=1;AN=190;BQB=0.99995;DP=2370;DP4=1227,1059,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.8392e-05;MQSB=0.763964;RPB=0.892123;SGB=39.9877;VDB=0.590704;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R14|82|LOC_Os10g24004|protein_coding|CODING|LOC_Os10g24004.1|1|1) FN996-S.SNP.10:12307221 chr10:012307221 0 W/12307221-12307221 FN996-S Single Base Substitution C-A INTRON HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN-375.SNP.10:12313530 chr10:012313530 0 W/12313530-12313530 FN-375 Single Base Substitution C-T INTERGENIC HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN985-S.SNP.10:12317162 chr10:012317162 0 W/12317162-12317162 FN985-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g24040 transposon protein, putative, Pong sub-class, expressed SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1228-S.SNP.10:12321439 chr10:012321439 0 W/12321439-12321439 FN1228-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g24050 ribosome inactivating protein, putative, expressed SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN-220.SNP.10:12323512 chr10:012323512 0 W/12323512-12323512 FN-220 Single Base Substitution T-C INTERGENIC HOMO SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2668-S.SNP.10:12325811 chr10:012325811 0 W/12325811-12325811 FN2668-S SNP C -> A AC=1;AN=200;BQB=0.945919;DP=4920;DP4=2476,2188,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.46245e-19;MQSB=0.997121;RPB=0.929557;SGB=146.368;VDB=0.820168;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.10:12326105 chr10:012326105 0 W/12326105-12326105 FN2283 SNP T -> C AC=1;AN=192;BQB=0.965775;DP=5445;DP4=2743,2422,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.000390948;MQSB=0.0145786;RPB=0.574028;SGB=57.6018;VDB=0.850829;EFF=INTERGENIC(MODIFIER||||||||||1) FN-62.SNP.10:12335307 chr10:012335307 0 W/12335307-12335307 FN-62 Single Base Substitution A-G INTRON HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN680-S.SNP.10:12336317 chr10:012336317 0 W/12336317-12336317 FN680-S Single Base Substitution G-A SPLICE_SITE_ACCEPTOR HOMO LOC_Os10g24070 expressed protein SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2453.SNP.10:12338230 chr10:012338230 0 W/12338230-12338230 FN2453 SNP T -> A AC=1;AN=200;BQB=0.259575;DP=4050;DP4=1486,2334,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59617e-05;MQSB=0.668598;RPB=0.994478;SGB=40.4492;VDB=0.185182;EFF=INTRON(MODIFIER||||52|LOC_Os10g24080|protein_coding|CODING|LOC_Os10g24080.1|1|1) FN3319-S.SNP.10:12339555 chr10:012339555 0 W/12339555-12339555 FN3319-S SNP T -> A AC=1;AN=184;BQB=0.764529;DP=3370;DP4=1581,1667,1,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00313136;MQSB=0.747801;RPB=0.594455;SGB=44.2207;VDB=0.52194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.10:12342703 chr10:012342703 0 W/12342703-12342703 FN2222-S SNP C -> A AC=1;AN=190;BQB=0.733681;DP=2107;DP4=675,1054,1,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000313505;MQSB=0.651757;RPB=0.54626;SGB=36.1006;VDB=0.860729;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T14K|235|LOC_Os10g24090|protein_coding|CODING|LOC_Os10g24090.1|1|1),INTRON(MODIFIER||||77|LOC_Os10g24094|protein_coding|CODING|LOC_Os10g24094.2|4|1) FN-292.SNP.10:12349371 chr10:012349371 0 W/12349371-12349371 FN-292 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g24100 expressed protein SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN1086-S.SNP.10:12355755 chr10:012355755 0 W/12355755-12355755 FN1086-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g24110 retrotransposon protein, putative, unclassified, expressed SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN460-S.SNP.10:12357932 chr10:012357932 0 W/12357932-12357932 FN460-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g24110 retrotransposon protein, putative, unclassified, expressed SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1499-S.SNP.10:12362232 chr10:012362232 0 W/12362232-12362232 FN1499-S Single Base Substitution G-T INTRON Homo SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-160.SNP.10:12373116 chr10:012373116 0 W/12373116-12373116 FN-160 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os10g24150 zinc knuckle family protein, expressed SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1337-S.SNP.10:12376575 chr10:012376575 0 W/12376575-12376575 FN1337-S Single Base Substitution C-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN1688-S.SNP.10:12378243 chr10:012378243 0 W/12378243-12378243 FN1688-S SNP C -> G AC=2;AN=188;BQB=0.904161;DP=3234;DP4=1592,1594,11,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.67318e-14;MQSB=0.687641;RPB=0.735093;SGB=56.5957;VDB=0.585146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L36V|469|LOC_Os10g24160|protein_coding|CODING|LOC_Os10g24160.1|1|1) FN830-S.SNP.10:12380594 chr10:012380594 0 W/12380594-12380594 FN830-S Single Base Substitution G-A INTRON HET SNo: 743, Mutant_ID: FN830-S, Generation: M2, Mutations: 49, Genes: 26, Seed availability: Yes. FN2794-S.SNP.10:12380660 chr10:012380660 0 W/12380660-12380660 FN2794-S SNP G -> C AC=1;AN=198;BQB=0.0634427;DP=4257;DP4=2058,1981,12,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.10833e-06;MQSB=0.189162;RPB=0.630167;SGB=-9.07482;VDB=0.402104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S426T|469|LOC_Os10g24160|protein_coding|CODING|LOC_Os10g24160.1|5|1) FN3417-S.SNP.10:12382341 chr10:012382341 0 W/12382341-12382341 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.677535;DP=2808;DP4=1466,1273,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.23809e-07;MQSB=0.513122;RPB=0.969374;SGB=44.2207;VDB=0.78249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E311K|434|LOC_Os10g24170|protein_coding|CODING|LOC_Os10g24170.1|2|1) FN3417-S.SNP.10:12382343 chr10:012382343 0 W/12382343-12382343 FN3417-S SNP C -> T AC=1;AN=184;BQB=0.970234;DP=2814;DP4=1464,1263,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.34988e-07;MQSB=0.543148;RPB=0.999743;SGB=32.2261;VDB=0.888914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G310E|434|LOC_Os10g24170|protein_coding|CODING|LOC_Os10g24170.1|2|1) FN421-S.SNP.10:12384436 chr10:012384436 0 W/12384436-12384436 FN421-S Single Base Substitution C-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1722-S.SNP.10:12386668 chr10:012386668 0 W/12386668-12386668 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.600979;DP=2764;DP4=769,1912,8,14;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00470333;MQB=0.00286768;MQSB=0.19289;RPB=0.519134;SGB=-11.74;VDB=0.127207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.10:12386668 chr10:012386668 0 W/12386668-12386668 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.601439;DP=5379;DP4=2507,2715,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.00111545;MQB=0.000169553;MQSB=0.229699;RPB=0.990323;SGB=89.4087;VDB=0.109507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.10:12387170 chr10:012387170 0 W/12387170-12387170 FN2320 SNP G -> A AC=1;AN=192;BQB=0.259319;DP=9220;DP4=4384,4225,20,20;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00151844;MQB=6.49144e-11;MQSB=0.0981213;RPB=0.462801;SGB=-90.3426;VDB=0.506339;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A33|176|LOC_Os10g24180|protein_coding|CODING|LOC_Os10g24180.1|1|1) FN2630-S.SNP.10:12390851 chr10:012390851 0 W/12390851-12390851 FN2630-S SNP G -> A AC=2;AN=200;BQB=0.89228;DP=4998;DP4=2356,2375,27,23;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.52924e-21;MQSB=0.924902;RPB=0.419754;SGB=115.456;VDB=0.415262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R327K|1445|LOC_Os10g24190|protein_coding|CODING|LOC_Os10g24190.1|2|1) FN_N1-116-1.SNP.10:12394635 chr10:012394635 0 W/12394635-12394635 FN_N1-116-1 Single Base Substitution G-A HET LOC_Os10g24190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN319-S.SNP.10:12394707 chr10:012394707 0 W/12394707-12394707 FN319-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN669-S.SNP.10:12398847 chr10:012398847 0 W/12398847-12398847 FN669-S Single Base Substitution C-G INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN438-S.SNP.10:12400216 chr10:012400216 0 W/12400216-12400216 FN438-S Single Base Substitution A-C INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN1670-S.SNP.10:12401341 chr10:012401341 0 W/12401341-12401341 FN1670-S SNP A -> T AC=1;AN=188;BQB=0.877126;DP=3723;DP4=1900,1793,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.87316e-06;MQSB=0.999034;RPB=0.879334;SGB=35.9843;VDB=0.921272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.10:12401341 chr10:012401341 0 W/12401341-12401341 FN3862-S SNP A -> T AC=1;AN=158;BQB=0.898935;DP=2460;DP4=1296,1093,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.90003e-05;MQSB=0.894056;RPB=0.998217;SGB=27.3346;VDB=0.978067;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.10:12403765 chr10:012403765 0 W/12403765-12403765 FN1040-S Single Base Substitution T-C INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN3868-S.SNP.10:12405957 chr10:012405957 0 W/12405957-12405957 FN3868-S SNP C -> T AC=2;AN=158;BQB=0.917928;DP=2388;DP4=1083,1202,9,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.41406e-09;MQSB=0.999445;RPB=0.884844;SGB=44.1818;VDB=0.864993;EFF=INTERGENIC(MODIFIER||||||||||1) FN3770-S.SNP.10:12407400 chr10:012407400 0 W/12407400-12407400 FN3770-S SNP C -> T AC=1;AN=190;BQB=0.9292;DP=2612;DP4=1332,1202,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.89045e-07;MQSB=0.956842;RPB=0.71512;SGB=58.2031;VDB=0.189882;EFF=INTERGENIC(MODIFIER||||||||||1) FN-106.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN-106 Single Base Substitution C-T INTERGENIC HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN-311.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN-311 Single Base Substitution C-T INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1322-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN1322-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN1704-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN1704-S SNP C -> T AC=2;AN=188;BQB=0.937491;DP=1723;DP4=1124,545,19,2;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.76204e-12;MQSB=0.942976;RPB=0.744672;SGB=38.7926;VDB=0.229228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN2317 SNP C -> T AC=2;AN=192;BQB=0.315393;DP=4522;DP4=2150,2096,19,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000221141;MQB=6.88971e-14;MQSB=0.16734;RPB=0.134825;SGB=145.062;VDB=0.975307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN2477 SNP C -> T AC=2;AN=200;BQB=0.721939;DP=4216;DP4=1972,2009,20,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6092e-18;MQSB=0.192285;RPB=0.931375;SGB=141.763;VDB=0.662943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN3712-S SNP C -> T AC=1;AN=190;BQB=0.836866;DP=2587;DP4=1272,1229,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89155e-06;MQSB=0.788305;RPB=0.471574;SGB=44.5415;VDB=0.58057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN3775-S SNP C -> T AC=2;AN=190;BQB=0.967092;DP=2630;DP4=1286,1254,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.01549e-11;MQSB=0.978064;RPB=0.959244;SGB=90.0802;VDB=0.106331;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN3865-S SNP C -> T AC=1;AN=158;BQB=0.92344;DP=2368;DP4=1174,1126,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.66922e-07;MQSB=0.883811;RPB=0.996627;SGB=38.3284;VDB=0.630515;EFF=INTERGENIC(MODIFIER||||||||||1) FN778-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN778-S Single Base Substitution C-T INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN899-S.SNP.10:12407415 chr10:012407415 0 W/12407415-12407415 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN552-S.SNP.10:12407968 chr10:012407968 0 W/12407968-12407968 FN552-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN3505-S.SNP.10:12408539 chr10:012408539 0 W/12408539-12408539 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.653165;DP=3317;DP4=1532,1730,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000149057;MQSB=0.990088;RPB=0.32911;SGB=39.8925;VDB=0.431286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S250L|820|LOC_Os10g24220|protein_coding|CODING|LOC_Os10g24220.1|3|1) FN3520-S.SNP.10:12410486 chr10:012410486 0 W/12410486-12410486 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.723448;DP=2767;DP4=1369,1305,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68108e-11;MQSB=0.985876;RPB=0.941079;SGB=80.782;VDB=0.599855;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K769|820|LOC_Os10g24220|protein_coding|CODING|LOC_Os10g24220.1|6|1) FN3945-S.SNP.10:12413275 chr10:012413275 0 W/12413275-12413275 FN3945-S SNP A -> G AC=1;AN=168;BQB=0.957218;DP=2585;DP4=1058,1364,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22634e-07;MQSB=0.732504;RPB=0.368793;SGB=19.7539;VDB=0.149356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F507S|1077|LOC_Os10g24230|protein_coding|CODING|LOC_Os10g24230.1|6|1) FN912-S.SNP.10:12417755 chr10:012417755 0 W/12417755-12417755 FN912-S Single Base Substitution C-T INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2749-S.SNP.10:12417776 chr10:012417776 0 W/12417776-12417776 FN2749-S SNP C -> T AC=1;AN=200;BQB=0.866448;DP=4793;DP4=2447,2122,4,6;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0279574;MQB=0.348602;MQSB=4.43087e-05;RPB=0.989249;SGB=40.4492;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN-258 Single Base Substitution A-G INTERGENIC HOMO SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-390.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN-390 Single Base Substitution A-G INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-78.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN-78 Single Base Substitution A-G INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1501-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN1501-S Single Base Substitution A-G INTERGENIC HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN2231-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.452223;DP=5177;DP4=2392,2437,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10178e-14;MQSB=0.743183;RPB=0.672364;SGB=131.065;VDB=0.278709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2578-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN2578-S SNP A -> G AC=1;AN=198;BQB=0.734166;DP=4180;DP4=2000,1982,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.4417e-08;MQSB=0.999996;RPB=0.342031;SGB=24.1541;VDB=0.801753;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN3372-S SNP A -> G AC=2;AN=184;BQB=0.94104;DP=3169;DP4=1559,1501,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.59636e-16;MQSB=0.872972;RPB=0.997691;SGB=125.613;VDB=0.362252;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN4046-S SNP A -> G AC=1;AN=168;BQB=0.842546;DP=2875;DP4=1382,1381,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.36679e-09;MQSB=0.883576;RPB=0.862889;SGB=2.75988;VDB=0.561688;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN759-S Single Base Substitution A-G INTERGENIC HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN831-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN831-S Single Base Substitution A-G INTERGENIC HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN872-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN872-S Single Base Substitution A-G INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN933-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN933-S Single Base Substitution A-G INTERGENIC HOMO SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN956-S.SNP.10:12427593 chr10:012427593 0 W/12427593-12427593 FN956-S Single Base Substitution A-G INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2085-S.SNP.10:12428448 chr10:012428448 0 W/12428448-12428448 FN2085-S SNP T -> C AC=1;AN=168;BQB=6.39849e-05;DP=3110;DP4=1352,1720,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.20553e-06;MQSB=0.999492;RPB=0.309989;SGB=-115.779;VDB=0.222748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.10:12429396 chr10:012429396 0 W/12429396-12429396 FN2480 SNP C -> T AC=1;AN=200;BQB=0.499189;DP=4951;DP4=2433,2224,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.89293e-08;MQSB=0.9562;RPB=0.976129;SGB=-34.1311;VDB=0.746499;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.10:12429467 chr10:012429467 0 W/12429467-12429467 FN2782-S SNP A -> T AC=1;AN=198;BQB=0.830441;DP=4097;DP4=1959,1668,14,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.74061e-18;MQSB=0.99996;RPB=0.914474;SGB=-83.7086;VDB=0.0776645;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.10:12436242 chr10:012436242 0 W/12436242-12436242 FN2580-S SNP T -> C AC=2;AN=198;BQB=0.996572;DP=4544;DP4=2102,2198,17,20;HOB=0.019998;ICB=0.495001;MQ=38;MQ0F=0.0112236;MQB=0.672745;MQSB=0.959855;RPB=0.998334;SGB=122.837;VDB=0.543541;EFF=INTRON(MODIFIER||||193|LOC_Os10g24270|protein_coding|CODING|LOC_Os10g24270.1|1|1) FN-22.SNP.10:12437040 chr10:012437040 0 W/12437040-12437040 FN-22 Single Base Substitution T-A INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-22.SNP.10:12437042 chr10:012437042 0 W/12437042-12437042 FN-22 Single Base Substitution G-A INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-22.SNP.10:12437044 chr10:012437044 0 W/12437044-12437044 FN-22 Single Base Substitution C-A INTRON Homo SNo: 22, Mutant_ID: FN-22, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1443-S.SNP.10:12443024 chr10:012443024 0 W/12443024-12443024 FN1443-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24290 retrotransposon protein, putative, unclassified, expressed SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. W22-2-1.SNP.10:12449052 chr10:012449052 0 W/12449052-12449052 W22-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3889-S.SNP.10:12449120 chr10:012449120 0 W/12449120-12449120 FN3889-S SNP C -> T AC=2;AN=158;BQB=0.886592;DP=1795;DP4=934,713,9,10;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.000557103;MQB=2.43849e-09;MQSB=0.0553065;RPB=0.806975;SGB=30.927;VDB=0.354412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.10:12457294 chr10:012457294 0 W/12457294-12457294 FN3964-S SNP G -> A AC=1;AN=168;BQB=0.954102;DP=2049;DP4=856,1052,3,10;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0375793;MQB=0.0921066;MQSB=0.314989;RPB=0.832347;SGB=34.748;VDB=0.906409;EFF=INTRON(MODIFIER||||1016|LOC_Os10g24310|protein_coding|CODING|LOC_Os10g24310.1|11|1) FN996-S.SNP.10:12460549 chr10:012460549 0 W/12460549-12460549 FN996-S Single Base Substitution C-A INTERGENIC HET SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN773-S.SNP.10:12466270 chr10:012466270 0 W/12466270-12466270 FN773-S Single Base Substitution T-A INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN930-S.SNP.10:12469035 chr10:012469035 0 W/12469035-12469035 FN930-S Single Base Substitution G-A INTERGENIC HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2619-S.SNP.10:12472747 chr10:012472747 0 W/12472747-12472747 FN2619-S SNP C -> G AC=1;AN=198;BQB=0.930127;DP=6563;DP4=3259,2862,18,17;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.090355;MQB=0.0521552;MQSB=0.00679493;RPB=0.0475578;SGB=115.647;VDB=0.683011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.10:12473061 chr10:012473061 0 W/12473061-12473061 FN2440 SNP T -> C AC=1;AN=200;BQB=0.756964;DP=5897;DP4=2765,2646,6,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00576564;MQB=0.000593055;MQSB=1.5258e-11;RPB=0.826551;SGB=40.2696;VDB=0.406196;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.10:12477612 chr10:012477612 0 W/12477612-12477612 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1708-S.SNP.10:12480324 chr10:012480324 0 W/12480324-12480324 FN1708-S SNP G -> A AC=2;AN=188;BQB=0.524776;DP=2934;DP4=1571,1318,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.09992e-13;MQSB=0.96514;RPB=0.999915;SGB=-41.4749;VDB=0.903995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.10:12486230 chr10:012486230 0 W/12486230-12486230 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.954609;DP=2730;DP4=1339,1306,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0003663;MQB=6.20751e-05;MQSB=0.181877;RPB=0.999324;SGB=25.439;VDB=0.543076;EFF=INTRON(MODIFIER||||701|LOC_Os10g24370|protein_coding|CODING|LOC_Os10g24370.1|3|1) FN2583-S.SNP.10:12488793 chr10:012488793 0 W/12488793-12488793 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.754192;DP=4495;DP4=1942,2286,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.61839e-16;MQSB=0.999397;RPB=0.985821;SGB=79.9264;VDB=0.604396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D102Y|561|LOC_Os10g24380|protein_coding|CODING|LOC_Os10g24380.1|1|1) FN1661-S.SNP.10:12493808 chr10:012493808 0 W/12493808-12493808 FN1661-S Single Base Substitution A-T INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1371-S.SNP.10:12494393 chr10:012494393 0 W/12494393-12494393 FN1371-S Single Base Substitution C-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2273-S.SNP.10:12496852 chr10:012496852 0 W/12496852-12496852 FN2273-S SNP C -> A AC=1;AN=190;BQB=0.941197;DP=5242;DP4=2313,2558,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=2.19432e-06;MQSB=0.705536;RPB=0.960615;SGB=11.8805;VDB=0.919254;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.10:12498635 chr10:012498635 0 W/12498635-12498635 FN2347 SNP C -> T AC=1;AN=192;BQB=0.900485;DP=4826;DP4=2238,2345,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37288e-14;MQSB=0.912048;RPB=0.956601;SGB=89.6809;VDB=0.934637;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L110|120|LOC_Os10g24390|protein_coding|CODING|LOC_Os10g24390.1|3|1) FN3576-S.SNP.10:12498635 chr10:012498635 0 W/12498635-12498635 FN3576-S SNP C -> T AC=2;AN=188;BQB=0.255439;DP=3231;DP4=1667,1457,24,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.17411e-18;MQSB=0.74672;RPB=0.904127;SGB=145.826;VDB=0.964114;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L110|120|LOC_Os10g24390|protein_coding|CODING|LOC_Os10g24390.1|3|1) FN343-S.SNP.10:12505601 chr10:012505601 0 W/12505601-12505601 FN343-S Single Base Substitution A-G INTRON HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2091-S.SNP.10:12511563 chr10:012511563 0 W/12511563-12511563 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.33927;DP=2986;DP4=1241,1558,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.47793e-12;MQSB=0.0210501;RPB=0.752813;SGB=-44.0584;VDB=0.0156506;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.10:12516075 chr10:012516075 0 W/12516075-12516075 FN440-S Single Base Substitution C-T INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN1271-S.SNP.10:12519704 chr10:012519704 0 W/12519704-12519704 FN1271-S Single Base Substitution G-A INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2120-S.SNP.10:12519829 chr10:012519829 0 W/12519829-12519829 FN2120-S SNP G -> A AC=1;AN=168;BQB=0.386325;DP=1562;DP4=1022,484,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.0953905;MQB=0.559698;MQSB=2.14558e-05;RPB=0.423201;SGB=-1.53256;VDB=0.575341;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.10:12522726 chr10:012522726 0 W/12522726-12522726 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.890413;DP=3170;DP4=1408,1650,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.102839;MQB=0.551262;MQSB=0.995561;RPB=0.993954;SGB=-0.550503;VDB=0.652509;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q296*|1839|LOC_Os10g24420|protein_coding|CODING|LOC_Os10g24420.1|2|1);LOF=(LOC_Os10g24420|LOC_Os10g24420|1|1.00);NMD=(LOC_Os10g24420|LOC_Os10g24420|1|1.00) FN1707-S.SNP.10:12525436 chr10:012525436 0 W/12525436-12525436 FN1707-S SNP C -> T AC=1;AN=188;BQB=0.0716256;DP=3752;DP4=1314,2399,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.152719;MQB=0.814162;MQSB=0.0189373;RPB=0.956428;SGB=-114.435;VDB=0.976324;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P1126|1839|LOC_Os10g24420|protein_coding|CODING|LOC_Os10g24420.1|4|1) W247-2-1.SNP.10:12526039 chr10:012526039 0 W/12526039-12526039 W247-2-1 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN710-S.SNP.10:12526758 chr10:012526758 0 W/12526758-12526758 FN710-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN710-S.SNP.10:12526764 chr10:012526764 0 W/12526764-12526764 FN710-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN1400-S.SNP.10:12526997 chr10:012526997 0 W/12526997-12526997 FN1400-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN-251.SNP.10:12527264 chr10:012527264 0 W/12527264-12527264 FN-251 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g24420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN1120-S.SNP.10:12529151 chr10:012529151 0 W/12529151-12529151 FN1120-S Single Base Substitution T-C INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1735-S.SNP.10:12531123 chr10:012531123 0 W/12531123-12531123 FN1735-S SNP C -> T AC=2;AN=188;BQB=0.916513;DP=2950;DP4=1253,1637,10,26;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=8.85984e-16;MQSB=0.0659731;RPB=0.259923;SGB=117.48;VDB=0.0863875;EFF=INTRON(MODIFIER||||219|LOC_Os10g24430|protein_coding|CODING|LOC_Os10g24430.1|1|1) FN1093-S.SNP.10:12534337 chr10:012534337 0 W/12534337-12534337 FN1093-S Single Base Substitution G-C INTERGENIC HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2475.SNP.10:12538932 chr10:012538932 0 W/12538932-12538932 FN2475 SNP A -> T AC=1;AN=200;BQB=0.476347;DP=4661;DP4=2350,1947,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48958e-11;MQSB=0.998092;RPB=0.981276;SGB=77.2904;VDB=0.803346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S662T|724|LOC_Os10g24450|protein_coding|CODING|LOC_Os10g24450.1|9|1) FN2203-S.SNP.10:12541509 chr10:012541509 0 W/12541509-12541509 FN2203-S SNP T -> C AC=1;AN=190;BQB=0.199661;DP=4779;DP4=2519,1789,17,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000418498;MQB=1.1958e-10;MQSB=0.396426;RPB=0.591568;SGB=21.2038;VDB=0.963438;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K150R|724|LOC_Os10g24450|protein_coding|CODING|LOC_Os10g24450.1|6|1) FN4158-S.SNP.10:12546326 chr10:012546326 0 W/12546326-12546326 FN4158-S SNP C -> A AC=1;AN=170;BQB=0.903587;DP=774;DP4=113,609,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.189922;MQB=0.700702;MQSB=2.175e-17;RPB=0.997777;SGB=34.5445;VDB=0.490055;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.10:12547619 chr10:012547619 0 W/12547619-12547619 FN-127 Single Base Substitution G-A INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2544-S.SNP.10:12553367 chr10:012553367 0 W/12553367-12553367 FN2544-S SNP C -> A AC=1;AN=198;BQB=0.949411;DP=6527;DP4=2826,3276,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0162402;MQB=2.54249e-06;MQSB=3.31025e-09;RPB=0.00876182;SGB=20.5152;VDB=0.00194363;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C1546*|1751|LOC_Os10g24460|protein_coding|CODING|LOC_Os10g24460.1|4|1) FN3729-S.SNP.10:12553367 chr10:012553367 0 W/12553367-12553367 FN3729-S SNP C -> A AC=1;AN=190;BQB=0.999529;DP=5109;DP4=2154,2775,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0144842;MQB=0.000570095;MQSB=0.000735352;RPB=0.67627;SGB=50.3161;VDB=0.0826641;EFF=STOP_GAINED(HIGH|NONSENSE|tgC/tgA|C1546*|1751|LOC_Os10g24460|protein_coding|CODING|LOC_Os10g24460.1|4|1) FN926-S.SNP.10:12553367 chr10:012553367 0 W/12553367-12553367 FN926-S Single Base Substitution C-A STOP_GAINED HET LOC_Os10g24460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN984-S.SNP.10:12553367 chr10:012553367 0 W/12553367-12553367 FN984-S Single Base Substitution C-A STOP_GAINED HET LOC_Os10g24460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN751-S.SNP.10:12557479 chr10:012557479 0 W/12557479-12557479 FN751-S Single Base Substitution C-T INTERGENIC HOMO SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN959-S.SNP.10:12561329 chr10:012561329 0 W/12561329-12561329 FN959-S Single Base Substitution A-T INTRON HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN959-S.SNP.10:12561330 chr10:012561330 0 W/12561330-12561330 FN959-S Single Base Substitution C-T INTRON HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN4260-S.SNP.10:12561896 chr10:012561896 0 W/12561896-12561896 FN4260-S SNP A -> C AC=1;AN=170;BQB=0.959712;DP=2323;DP4=1113,1138,9,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.16768e-13;MQSB=0.968471;RPB=0.583524;SGB=101.184;VDB=0.958984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L179R|483|LOC_Os10g24470|protein_coding|CODING|LOC_Os10g24470.1|2|1) FN302-S.SNP.10:12563641 chr10:012563641 0 W/12563641-12563641 FN302-S Single Base Substitution A-G INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-412.SNP.10:12574459 chr10:012574459 0 W/12574459-12574459 FN-412 Single Base Substitution C-T INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN1273-S.SNP.10:12575307 chr10:012575307 0 W/12575307-12575307 FN1273-S Single Base Substitution A-C INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN4155-S.SNP.10:12575579 chr10:012575579 0 W/12575579-12575579 FN4155-S SNP C -> T AC=1;AN=170;BQB=0.981303;DP=3112;DP4=1180,1827,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0183162;MQB=0.088737;MQSB=5.1996e-08;RPB=0.999832;SGB=52.3148;VDB=0.841432;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.10:12578385 chr10:012578385 0 W/12578385-12578385 FN621-S Single Base Substitution C-T INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN229-S.SNP.10:12579663 chr10:012579663 0 W/12579663-12579663 FN229-S Single Base Substitution C-T INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN3564-S.SNP.10:12580056 chr10:012580056 0 W/12580056-12580056 FN3564-S SNP G -> A AC=1;AN=188;BQB=0.838342;DP=3099;DP4=1399,1572,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00484027;MQB=0.000839822;MQSB=0.0864186;RPB=0.913197;SGB=58.0655;VDB=0.542474;EFF=INTERGENIC(MODIFIER||||||||||1) FN1559-S.SNP.10:12587234 chr10:012587234 0 W/12587234-12587234 FN1559-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g24520 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN4093-S.SNP.10:12587520 chr10:012587520 0 W/12587520-12587520 FN4093-S SNP G -> T AC=2;AN=182;BQB=0.923598;DP=3263;DP4=1447,1683,8,10;HOB=0.0217365;ICB=0.494567;MQ=25;MQ0F=0.215752;MQB=0.82977;MQSB=6.89325e-14;RPB=0.281534;SGB=75.6874;VDB=0.632406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.10:12588510 chr10:012588510 0 W/12588510-12588510 FN2293 SNP C -> A AC=1;AN=192;BQB=0.998385;DP=4719;DP4=1896,2270,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00317864;MQB=0.343493;MQSB=2.12294e-13;RPB=0.984275;SGB=10.9636;VDB=0.108725;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P31T|454|LOC_Os10g24530|protein_coding|CODING|LOC_Os10g24530.1|1|1) FN1563-S.SNP.10:12590164 chr10:012590164 0 W/12590164-12590164 FN1563-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g24530 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. W252-6-1.SNP.10:12592165 chr10:012592165 0 W/12592165-12592165 W252-6-1 Single Base Substitution C-T INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2261-S.SNP.10:12594051 chr10:012594051 0 W/12594051-12594051 FN2261-S SNP G -> T AC=1;AN=190;BQB=0.931804;DP=4879;DP4=2307,2323,25,30;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00061488;MQB=5.04096e-20;MQSB=0.00504994;RPB=0.462519;SGB=125.815;VDB=0.726631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K603N|1326|LOC_Os10g24540|protein_coding|CODING|LOC_Os10g24540.1|1|1) FN3368-S.SNP.10:12594481 chr10:012594481 0 W/12594481-12594481 FN3368-S SNP G -> A AC=1;AN=184;BQB=0.804663;DP=2909;DP4=1439,1381,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00825026;MQB=0.135741;MQSB=0.231094;RPB=0.999997;SGB=39.2697;VDB=0.851906;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D736N|1326|LOC_Os10g24540|protein_coding|CODING|LOC_Os10g24540.1|2|1) FN3630-S.SNP.10:12599214 chr10:012599214 0 W/12599214-12599214 FN3630-S SNP A -> T AC=1;AN=190;BQB=0.960527;DP=2962;DP4=1431,1417,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0195814;MQB=0.429606;MQSB=0.00435897;RPB=0.49898;SGB=44.5415;VDB=0.253803;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.10:12603640 chr10:012603640 0 W/12603640-12603640 FN4069-S SNP A -> T AC=2;AN=182;BQB=0.9931;DP=3485;DP4=1522,1733,29,31;HOB=0.0217365;ICB=0.494567;MQ=31;MQ0F=0.112195;MQB=0.371836;MQSB=0;RPB=0.962902;SGB=156.155;VDB=0.999816;EFF=INTRON(MODIFIER||||1802|LOC_Os10g24560|protein_coding|CODING|LOC_Os10g24560.1|1|1) FN-223.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN-223 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-306.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN-306 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1075-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN1075-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN3577-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN3577-S SNP G -> A AC=2;AN=188;BQB=0.369622;DP=3327;DP4=1569,1620,19,25;HOB=0.0210502;ICB=0.494738;MQ=39;MQ0F=0.0120228;MQB=0.0582046;MQSB=0.0426761;RPB=0.980163;SGB=97.2884;VDB=0.879354;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A152T|1802|LOC_Os10g24560|protein_coding|CODING|LOC_Os10g24560.1|2|1) FN3899-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN3899-S SNP G -> A AC=1;AN=158;BQB=0.349838;DP=2366;DP4=977,1248,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.012257;MQB=0.172348;MQSB=0.654578;RPB=0.853507;SGB=-6.1304;VDB=0.326267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A152T|1802|LOC_Os10g24560|protein_coding|CODING|LOC_Os10g24560.1|2|1) FN405-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN405-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN589-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN589-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN854-S.SNP.10:12604490 chr10:012604490 0 W/12604490-12604490 FN854-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. W42-1-3S-1.SNP.10:12606323 chr10:012606323 0 W/12606323-12606323 W42-1-3S-1 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-370.SNP.10:12607834 chr10:012607834 0 W/12607834-12607834 FN-370 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN1427-S.SNP.10:12608016 chr10:012608016 0 W/12608016-12608016 FN1427-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1307-S.SNP.10:12608093 chr10:012608093 0 W/12608093-12608093 FN1307-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN906-S.SNP.10:12609402 chr10:012609402 0 W/12609402-12609402 FN906-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN3561-S.SNP.10:12609843 chr10:012609843 0 W/12609843-12609843 FN3561-S SNP T -> C AC=1;AN=188;BQB=0.995906;DP=2737;DP4=967,1605,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=1.04192e-06;MQSB=0.994083;RPB=0.90671;SGB=60.7873;VDB=0.435125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S1801P|1802|LOC_Os10g24560|protein_coding|CODING|LOC_Os10g24560.1|5|1) FN2146-S.SNP.10:12611498 chr10:012611498 0 W/12611498-12611498 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.0443217;DP=3680;DP4=1881,1768,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0421196;MQB=0.999043;MQSB=1.02526e-40;RPB=0.359718;SGB=-101.503;VDB=0.0408869;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.10:12614765 chr10:012614765 0 W/12614765-12614765 FN4090-S SNP T -> G AC=1;AN=182;BQB=0.999231;DP=3660;DP4=1700,1869,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.119945;MQB=0.924409;MQSB=0;RPB=0.944511;SGB=71.1765;VDB=0.379053;EFF=INTRON(MODIFIER||||710|LOC_Os10g24570|protein_coding|CODING|LOC_Os10g24570.1|3|1) FN3565-S.SNP.10:12616949 chr10:012616949 0 W/12616949-12616949 FN3565-S SNP A -> T AC=1;AN=188;BQB=0.898982;DP=3494;DP4=1334,1836,15,14;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.00457928;MQB=0.119171;MQSB=1.74271e-08;RPB=0.772161;SGB=59.139;VDB=0.410395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.10:12631736 chr10:012631736 0 W/12631736-12631736 FN2293 SNP G -> A AC=1;AN=192;BQB=0.993396;DP=4884;DP4=2481,2023,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0004095;MQB=4.04071e-05;MQSB=1.35442e-28;RPB=0.986156;SGB=36.2157;VDB=0.702813;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.10:12631739 chr10:012631739 0 W/12631739-12631739 FN2293 SNP C -> A AC=1;AN=192;BQB=0.0222592;DP=4862;DP4=2429,2122,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.000411353;MQB=0.000170059;MQSB=5.39792e-35;RPB=0.841401;SGB=23.7852;VDB=0.536159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.10:12637212 chr10:012637212 0 W/12637212-12637212 FN3566-S SNP A -> G AC=1;AN=188;BQB=0.883469;DP=2914;DP4=1649,1146,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.228895;MQB=0.0757031;MQSB=0;RPB=0.822356;SGB=62.6088;VDB=0.490473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T912A|1701|LOC_Os10g24620|protein_coding|CODING|LOC_Os10g24620.1|4|1) FN3627-S.SNP.10:12638034 chr10:012638034 0 W/12638034-12638034 FN3627-S SNP A -> C AC=1;AN=190;BQB=0.837579;DP=3260;DP4=1415,1660,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=15;MQ0F=0.48589;MQB=0.422246;MQSB=1.84711e-26;RPB=0.626991;SGB=71.6393;VDB=0.641826;EFF=SYNONYMOUS_CODING(LOW|SILENT|Aga/Cga|R1186|1701|LOC_Os10g24620|protein_coding|CODING|LOC_Os10g24620.1|4|1) FN3941-S.SNP.10:12641462 chr10:012641462 0 W/12641462-12641462 FN3941-S SNP G -> C AC=1;AN=168;BQB=0.998203;DP=3050;DP4=1747,1111,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=25;MQ0F=0.15541;MQB=0.789453;MQSB=0.139586;RPB=0.446631;SGB=45.0404;VDB=0.0271016;EFF=INTERGENIC(MODIFIER||||||||||1) FN_826-4-1.SNP.10:12649085 chr10:012649085 0 W/12649085-12649085 FN_826-4-1 Single Base Substitution C-T HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN1744-S.SNP.10:12653341 chr10:012653341 0 W/12653341-12653341 FN1744-S SNP T -> A AC=2;AN=188;BQB=0.154701;DP=3030;DP4=754,2229,8,21;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.000990099;MQB=0.776669;MQSB=0.965746;RPB=0.699782;SGB=92.677;VDB=0.647897;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.10:12654074 chr10:012654074 0 W/12654074-12654074 FN957-S Single Base Substitution G-A INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1444-S.SNP.10:12654191 chr10:012654191 0 W/12654191-12654191 FN1444-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN-118.SNP.10:12654956 chr10:012654956 0 W/12654956-12654956 FN-118 Single Base Substitution A-G INTERGENIC HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN4141-S.SNP.10:12654956 chr10:012654956 0 W/12654956-12654956 FN4141-S SNP A -> G AC=2;AN=170;BQB=0.441383;DP=2259;DP4=1277,905,9,11;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00486941;MQB=7.88389e-05;MQSB=0.473732;RPB=0.0833002;SGB=58.9766;VDB=0.767655;EFF=INTERGENIC(MODIFIER||||||||||1) FN576-S.SNP.10:12654956 chr10:012654956 0 W/12654956-12654956 FN576-S Single Base Substitution A-G INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3667-S.SNP.10:12656007 chr10:012656007 0 W/12656007-12656007 FN3667-S SNP G -> A AC=1;AN=190;BQB=0.83009;DP=2725;DP4=1332,1302,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.013578;MQB=3.05e-09;MQSB=0.479778;RPB=0.674721;SGB=85.5263;VDB=0.370777;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.10:12656697 chr10:012656697 0 W/12656697-12656697 FN2754-S SNP G -> A AC=1;AN=200;BQB=0.977161;DP=5036;DP4=2412,2311,10,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.76516e-12;MQSB=0.97893;RPB=0.354799;SGB=42.5108;VDB=0.471712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.10:12656700 chr10:012656700 0 W/12656700-12656700 FN2754-S SNP G -> T AC=1;AN=200;BQB=0.704018;DP=5013;DP4=2439,2234,9,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.30992e-12;MQSB=0.930676;RPB=0.401791;SGB=42.5108;VDB=0.194346;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.10:12658184 chr10:012658184 0 W/12658184-12658184 FN2379 SNP C -> A AC=1;AN=192;BQB=0.97783;DP=4813;DP4=2246,2262,17,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.97752e-22;MQSB=0.873275;RPB=0.774847;SGB=85.3296;VDB=0.40449;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.10:12661977 chr10:012661977 0 W/12661977-12661977 FN2365 SNP C -> G AC=1;AN=192;BQB=0.994431;DP=4739;DP4=2319,2198,17,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.0011e-20;MQSB=0.739296;RPB=0.773592;SGB=35.5131;VDB=0.793972;EFF=INTRON(MODIFIER||||886|LOC_Os10g24640|protein_coding|CODING|LOC_Os10g24640.1|1|1) 704-4-3.SNP.10:12664659 chr10:012664659 0 W/12664659-12664659 704-4-3 Single Base Substitution C-T INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. FN2476.SNP.10:12664660 chr10:012664660 0 W/12664660-12664660 FN2476 SNP G -> A AC=2;AN=200;BQB=0.983234;DP=5004;DP4=2302,2328,24,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.73654e-28;MQSB=0.829113;RPB=0.982202;SGB=120.666;VDB=0.984659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.10:12666985 chr10:012666985 0 W/12666985-12666985 FN3547-S SNP A -> G AC=2;AN=188;BQB=0.860958;DP=3179;DP4=1329,1663,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.27252e-13;MQSB=0.877142;RPB=0.998208;SGB=103.498;VDB=0.204564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.10:12671819 chr10:012671819 0 W/12671819-12671819 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.736193;DP=2961;DP4=1475,1382,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000337724;MQB=1.60515e-08;MQSB=0.999626;RPB=0.743322;SGB=18.2315;VDB=0.0917102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.10:12674791 chr10:012674791 0 W/12674791-12674791 FN1517-S Single Base Substitution G-A INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1073-S.SNP.10:12677780 chr10:012677780 0 W/12677780-12677780 FN1073-S Single Base Substitution A-G INTRON HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN-221.SNP.10:12684164 chr10:012684164 0 W/12684164-12684164 FN-221 Single Base Substitution C-T INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN1407-S.SNP.10:12684313 chr10:012684313 0 W/12684313-12684313 FN1407-S Single Base Substitution T-C INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN419-S.SNP.10:12686166 chr10:012686166 0 W/12686166-12686166 FN419-S Single Base Substitution G-C INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2704-S.SNP.10:12689208 chr10:012689208 0 W/12689208-12689208 FN2704-S SNP T -> A AC=2;AN=200;BQB=0.717986;DP=4876;DP4=2264,2344,35,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.99443e-40;MQSB=0.938567;RPB=0.865383;SGB=201.693;VDB=0.422471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2243-S.SNP.10:12697557 chr10:012697557 0 W/12697557-12697557 FN2243-S SNP C -> G AC=2;AN=190;BQB=0.519826;DP=5051;DP4=2164,2482,20,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000197981;MQB=5.40614e-18;MQSB=0.491111;RPB=0.434406;SGB=-2.69832;VDB=0.92148;EFF=INTRON(MODIFIER||||1138|LOC_Os10g24700|protein_coding|CODING|LOC_Os10g24700.1|6|1) FN-299.SNP.10:12701075 chr10:012701075 0 W/12701075-12701075 FN-299 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os10g24700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN_N1-220-1.SNP.10:12705527 chr10:012705527 0 W/12705527-12705527 FN_N1-220-1 Single Base Substitution T-A Homo SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN2223-S.SNP.10:12707668 chr10:012707668 0 W/12707668-12707668 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.72975;DP=4569;DP4=1940,2351,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31664e-06;MQSB=0.291784;RPB=0.998164;SGB=39.6545;VDB=0.94314;EFF=INTRON(MODIFIER||||434|LOC_Os10g24710|protein_coding|CODING|LOC_Os10g24710.1|3|1) FN1293-S.SNP.10:12709322 chr10:012709322 0 W/12709322-12709322 FN1293-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g24710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN417-S.SNP.10:12711570 chr10:012711570 0 W/12711570-12711570 FN417-S Single Base Substitution C-A INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN982-S.SNP.10:12714023 chr10:012714023 0 W/12714023-12714023 FN982-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g24720 retrotransposon protein, putative, unclassified, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3982-S.SNP.10:12721022 chr10:012721022 0 W/12721022-12721022 FN3982-S SNP A -> C AC=1;AN=168;BQB=0.994318;DP=2870;DP4=1456,1318,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.24549e-06;MQSB=0.147015;RPB=0.998947;SGB=65.4653;VDB=0.0842421;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q816P|1461|LOC_Os10g24730|protein_coding|CODING|LOC_Os10g24730.1|3|1) FN3355-S.SNP.10:12722048 chr10:012722048 0 W/12722048-12722048 FN3355-S SNP A -> G AC=1;AN=184;BQB=0.964824;DP=2979;DP4=1580,1311,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.0634441;MQB=0.716123;MQSB=1.65365e-25;RPB=0.955086;SGB=66.8296;VDB=0.57367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H1158R|1461|LOC_Os10g24730|protein_coding|CODING|LOC_Os10g24730.1|3|1) FN923-S.SNP.10:12728388 chr10:012728388 0 W/12728388-12728388 FN923-S Single Base Substitution A-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN499-S.SNP.10:12729315 chr10:012729315 0 W/12729315-12729315 FN499-S Single Base Substitution C-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1334-S.SNP.10:12740125 chr10:012740125 0 W/12740125-12740125 FN1334-S Single Base Substitution C-T INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1465-S.SNP.10:12742643 chr10:012742643 0 W/12742643-12742643 FN1465-S Single Base Substitution T-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1570-S.SNP.10:12749678 chr10:012749678 0 W/12749678-12749678 FN1570-S Single Base Substitution T-G NON_SYNONYMOUS_CODING Homo LOC_Os10g24790 transposon protein, putative, unclassified, expressed SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN1213-S.SNP.10:12753303 chr10:012753303 0 W/12753303-12753303 FN1213-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN840-S.SNP.10:12764016 chr10:012764016 0 W/12764016-12764016 FN840-S Single Base Substitution C-A INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN-183.SNP.10:12770940 chr10:012770940 0 W/12770940-12770940 FN-183 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g24830 expressed protein SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN4143-S.SNP.10:12771543 chr10:012771543 0 W/12771543-12771543 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.944769;DP=2520;DP4=1128,1320,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.41985e-07;MQSB=0.916894;RPB=0.955552;SGB=43.4296;VDB=0.351251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D33N|335|LOC_Os10g24830|protein_coding|CODING|LOC_Os10g24830.1|1|1) FN544-S.SNP.10:12772683 chr10:012772683 0 W/12772683-12772683 FN544-S Single Base Substitution G-A INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN-184.SNP.10:12773936 chr10:012773936 0 W/12773936-12773936 FN-184 Single Base Substitution C-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-51.SNP.10:12776476 chr10:012776476 0 W/12776476-12776476 FN-51 Single Base Substitution T-A INTERGENIC HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3712-S.SNP.10:12781794 chr10:012781794 0 W/12781794-12781794 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.953094;DP=3003;DP4=1442,1446,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.94341e-09;MQSB=0.999385;RPB=0.952174;SGB=53.8699;VDB=0.0763753;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.10:12781912 chr10:012781912 0 W/12781912-12781912 FN-120 Single Base Substitution C-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN3980-S.SNP.10:12788823 chr10:012788823 0 W/12788823-12788823 FN3980-S SNP C -> T AC=1;AN=168;BQB=0.976818;DP=2523;DP4=1271,1158,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=4.22644e-06;MQSB=0.988074;RPB=0.610762;SGB=31.3172;VDB=0.0227724;EFF=INTERGENIC(MODIFIER||||||||||1) FN1140-S.SNP.10:12792472 chr10:012792472 0 W/12792472-12792472 FN1140-S Single Base Substitution T-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1333-S.SNP.10:12813098 chr10:012813098 0 W/12813098-12813098 FN1333-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1333-S.SNP.10:12813099 chr10:012813099 0 W/12813099-12813099 FN1333-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN3840-S.SNP.10:12814193 chr10:012814193 0 W/12814193-12814193 FN3840-S SNP C -> T AC=1;AN=190;BQB=0.967627;DP=2468;DP4=1438,969,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.45204e-07;MQSB=0.972225;RPB=0.792615;SGB=39.9877;VDB=0.482741;EFF=INTERGENIC(MODIFIER||||||||||1) FN931-S.SNP.10:12818060 chr10:012818060 0 W/12818060-12818060 FN931-S Single Base Substitution G-T INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3914-S.SNP.10:12820656 chr10:012820656 0 W/12820656-12820656 FN3914-S SNP G -> A AC=1;AN=158;BQB=0.917134;DP=2301;DP4=1177,1038,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.95787e-08;MQSB=0.981782;RPB=0.830713;SGB=30.704;VDB=0.792905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.10:12822110 chr10:012822110 0 W/12822110-12822110 FN1271-S Single Base Substitution C-T INTRON HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2344.SNP.10:12823768 chr10:012823768 0 W/12823768-12823768 FN2344 SNP G -> A AC=2;AN=192;BQB=0.81422;DP=4676;DP4=2449,1973,22,26;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00556031;MQB=1.39643e-12;MQSB=0.0235918;RPB=0.789085;SGB=108.409;VDB=0.659516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A348T|870|LOC_Os10g24910|protein_coding|CODING|LOC_Os10g24910.1|5|1) FN1527-S.SNP.10:12824281 chr10:012824281 0 W/12824281-12824281 FN1527-S Single Base Substitution G-A INTRON Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3560-S.SNP.10:12824281 chr10:012824281 0 W/12824281-12824281 FN3560-S SNP G -> A AC=2;AN=188;BQB=0.465019;DP=2891;DP4=1518,1292,18,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.08986e-14;MQSB=0.982722;RPB=0.146547;SGB=82.0471;VDB=0.816032;EFF=INTRON(MODIFIER||||870|LOC_Os10g24910|protein_coding|CODING|LOC_Os10g24910.1|5|1) FN_N1-26-1.SNP.10:12824281 chr10:012824281 0 W/12824281-12824281 FN_N1-26-1 Single Base Substitution G-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN-286.SNP.10:12826766 chr10:012826766 0 W/12826766-12826766 FN-286 Single Base Substitution C-T INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN2674-S.SNP.10:12831647 chr10:012831647 0 W/12831647-12831647 FN2674-S SNP A -> T AC=1;AN=200;BQB=0.966068;DP=4826;DP4=2316,2274,10,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.44828e-10;MQSB=0.00654573;RPB=0.394945;SGB=83.5316;VDB=0.257813;EFF=INTRON(MODIFIER||||438|LOC_Os10g24920|protein_coding|CODING|LOC_Os10g24920.1|2|1) FN2242-S.SNP.10:12832793 chr10:012832793 0 W/12832793-12832793 FN2242-S SNP A -> G AC=2;AN=190;BQB=0.991984;DP=4262;DP4=1790,2074,18,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000234632;MQB=3.24815e-12;MQSB=0.0480242;RPB=0.8;SGB=85.8548;VDB=0.947524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1382-S.SNP.10:12844447 chr10:012844447 0 W/12844447-12844447 FN1382-S Single Base Substitution T-A INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2667-S.SNP.10:12845922 chr10:012845922 0 W/12845922-12845922 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.827793;DP=5842;DP4=2935,2594,14,3;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00941458;MQB=4.66707e-05;MQSB=3.17456e-16;RPB=0.964922;SGB=72.6852;VDB=0.860465;EFF=SPLICE_SITE_REGION(LOW||||984|LOC_Os10g24954|protein_coding|CODING|LOC_Os10g24954.1|4|1),INTRON(MODIFIER||||984|LOC_Os10g24954|protein_coding|CODING|LOC_Os10g24954.1|4|1) FN1698-S.SNP.10:12847527 chr10:012847527 0 W/12847527-12847527 FN1698-S SNP T -> A AC=2;AN=188;BQB=0.995275;DP=2831;DP4=1690,1100,10,6;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00635818;MQB=6.78564e-06;MQSB=0.231364;RPB=0.208283;SGB=5.5382;VDB=0.271923;EFF=INTRON(MODIFIER||||984|LOC_Os10g24954|protein_coding|CODING|LOC_Os10g24954.1|6|1) FN-78.SNP.10:12863644 chr10:012863644 0 W/12863644-12863644 FN-78 Single Base Substitution T-C INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1102-S.SNP.10:12872256 chr10:012872256 0 W/12872256-12872256 FN1102-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g25010 OsCML8 - Calmodulin-related calcium sensor protein, expressed SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN4165-S.SNP.10:12883599 chr10:012883599 0 W/12883599-12883599 FN4165-S SNP A -> G AC=1;AN=170;BQB=0.54085;DP=2703;DP4=1499,1086,12,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00517943;MQB=8.94293e-06;MQSB=0.0102176;RPB=0.665809;SGB=29.6545;VDB=0.0168249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.10:12883792 chr10:012883792 0 W/12883792-12883792 FN2187-S SNP A -> T AC=2;AN=190;BQB=0.828658;DP=5357;DP4=2393,2429,19,21;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000186672;MQB=2.80565e-16;MQSB=0.792906;RPB=0.911391;SGB=87.5066;VDB=0.763533;EFF=INTERGENIC(MODIFIER||||||||||1) FN4021-S.SNP.10:12889852 chr10:012889852 0 W/12889852-12889852 FN4021-S SNP C -> A AC=1;AN=168;BQB=0.393577;DP=2544;DP4=1313,1140,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77576e-06;MQSB=0.896951;RPB=0.435951;SGB=41.6096;VDB=0.103636;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.10:12894397 chr10:012894397 0 W/12894397-12894397 FN-361 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN2308.SNP.10:12896380 chr10:012896380 0 W/12896380-12896380 FN2308 SNP C -> T AC=1;AN=192;BQB=0.162154;DP=3868;DP4=1841,1778,7,5;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000258532;MQB=0.000132858;MQSB=0.0474897;RPB=0.0259436;SGB=16.0922;VDB=0.0981463;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.10:12906630 chr10:012906630 0 W/12906630-12906630 FN-368 Single Base Substitution G-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN509-S.SNP.10:12912980 chr10:012912980 0 W/12912980-12912980 FN509-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g25080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN948-S.SNP.10:12916684 chr10:012916684 0 W/12916684-12916684 FN948-S Single Base Substitution T-C INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN3828-S.SNP.10:12920718 chr10:012920718 0 W/12920718-12920718 FN3828-S SNP C -> T AC=1;AN=190;BQB=0.880876;DP=2516;DP4=1219,1179,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000192025;MQSB=0.999332;RPB=0.934859;SGB=30.8803;VDB=0.229708;EFF=INTERGENIC(MODIFIER||||||||||1) FN-198.SNP.10:12920910 chr10:012920910 0 W/12920910-12920910 FN-198 Single Base Substitution G-A INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN769-S.SNP.10:12924228 chr10:012924228 0 W/12924228-12924228 FN769-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN1264-S.SNP.10:12926467 chr10:012926467 0 W/12926467-12926467 FN1264-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g25090 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN4208-S.SNP.10:12934471 chr10:012934471 0 W/12934471-12934471 FN4208-S SNP A -> T AC=2;AN=170;BQB=0.909093;DP=2232;DP4=941,1212,9,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.41792e-15;MQSB=0.961504;RPB=0.479097;SGB=118.955;VDB=0.362075;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.10:12934534 chr10:012934534 0 W/12934534-12934534 FN-312 Single Base Substitution A-G INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1307-S.SNP.10:12937337 chr10:012937337 0 W/12937337-12937337 FN1307-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1655-S.SNP.10:12943044 chr10:012943044 0 W/12943044-12943044 FN1655-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2702-S.SNP.10:12953767 chr10:012953767 0 W/12953767-12953767 FN2702-S SNP G -> T AC=1;AN=200;BQB=0.747342;DP=4703;DP4=2360,2121,6,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00233893;MQB=0.0692152;MQSB=0.0183062;RPB=0.87292;SGB=35.8441;VDB=0.529033;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.10:12954803 chr10:012954803 0 W/12954803-12954803 FN771-S Single Base Substitution G-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN-179.SNP.10:12958641 chr10:012958641 0 W/12958641-12958641 FN-179 Single Base Substitution C-A INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN3673-S.SNP.10:12959448 chr10:012959448 0 W/12959448-12959448 FN3673-S SNP C -> A AC=1;AN=190;BQB=0.958999;DP=2613;DP4=1127,1384,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22709e-05;MQSB=0.982252;RPB=0.220479;SGB=35.4339;VDB=0.130321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1023-S.SNP.10:12962927 chr10:012962927 0 W/12962927-12962927 FN1023-S Single Base Substitution G-T INTRON HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN4021-S.SNP.10:12963579 chr10:012963579 0 W/12963579-12963579 FN4021-S SNP C -> T AC=1;AN=168;BQB=0.480644;DP=3116;DP4=1266,1713,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.58533e-13;MQSB=0.589651;RPB=0.584846;SGB=46.4929;VDB=0.679275;EFF=INTRON(MODIFIER||||130|LOC_Os10g25120|protein_coding|CODING|LOC_Os10g25120.1|1|1) FN1424-S.SNP.10:12973451 chr10:012973451 0 W/12973451-12973451 FN1424-S Single Base Substitution C-T INTRON HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN1596-S.SNP.10:12981280 chr10:012981280 0 W/12981280-12981280 FN1596-S Single Base Substitution C-T INTRON HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN1186-S.SNP.10:12984084 chr10:012984084 0 W/12984084-12984084 FN1186-S Single Base Substitution T-C INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1750-S.SNP.10:12986176 chr10:012986176 0 W/12986176-12986176 FN1750-S SNP A -> T AC=2;AN=188;BQB=0.913148;DP=3943;DP4=1541,2324,26,33;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.16316e-28;MQSB=0.963078;RPB=0.607608;SGB=-118.714;VDB=0.842084;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.10:12994879 chr10:012994879 0 W/12994879-12994879 FN1494-S Single Base Substitution C-T INTERGENIC Homo SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2791-S.SNP.10:12996454 chr10:012996454 0 W/12996454-12996454 FN2791-S SNP A -> G AC=1;AN=198;BQB=0.963925;DP=4457;DP4=1972,2172,10,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.85305e-11;MQSB=0.165374;RPB=0.21168;SGB=65.3149;VDB=0.301623;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.10:13003509 chr10:013003509 0 W/13003509-13003509 FN1453-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN1686-S.SNP.10:13007890 chr10:013007890 0 W/13007890-13007890 FN1686-S SNP G -> T AC=1;AN=188;BQB=0.106949;DP=3398;DP4=1610,1744,16,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11385e-11;MQSB=0.998888;RPB=0.972752;SGB=-72.0994;VDB=0.80679;EFF=INTRON(MODIFIER||||1272|LOC_Os10g25200|protein_coding|CODING|LOC_Os10g25200.1|4|1) FN2128-S.SNP.10:13009113 chr10:013009113 0 W/13009113-13009113 FN2128-S SNP C -> A AC=1;AN=168;BQB=0.308479;DP=4141;DP4=2119,1984,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.99173e-11;MQSB=0.957483;RPB=0.830057;SGB=46.4929;VDB=0.559036;EFF=INTRON(MODIFIER||||1272|LOC_Os10g25200|protein_coding|CODING|LOC_Os10g25200.1|5|1) FN780-S.SNP.10:13027649 chr10:013027649 0 W/13027649-13027649 FN780-S Single Base Substitution C-T INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN512-S.SNP.10:13034035 chr10:013034035 0 W/13034035-13034035 FN512-S Single Base Substitution G-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2452.SNP.10:13034481 chr10:013034481 0 W/13034481-13034481 FN2452 SNP C -> G AC=1;AN=200;BQB=0.982021;DP=4990;DP4=2364,2355,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.15459e-11;MQSB=0.704377;RPB=0.0450051;SGB=81.8956;VDB=0.866298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.10:13040021 chr10:013040021 0 W/13040021-13040021 FN2495 SNP T -> A AC=1;AN=200;BQB=0.999769;DP=4492;DP4=2120,2077,9,4;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0271594;MQB=0.0132664;MQSB=0;RPB=0.634671;SGB=54.2646;VDB=0.921693;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.10:13040022 chr10:013040022 0 W/13040022-13040022 FN2495 SNP T -> A AC=1;AN=200;BQB=0.968747;DP=4486;DP4=2121,2102,9,5;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0298707;MQB=0.0157592;MQSB=0;RPB=0.56828;SGB=58.8698;VDB=0.866283;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.10:13043225 chr10:013043225 0 W/13043225-13043225 FN4072-S SNP C -> A AC=2;AN=182;BQB=0.885108;DP=2965;DP4=1437,1277,16,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.26958e-11;MQSB=0.0094056;RPB=0.890768;SGB=50.7635;VDB=0.802375;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P223|330|LOC_Os10g25250|protein_coding|CODING|LOC_Os10g25250.1|3|1) FN3665-S.SNP.10:13043972 chr10:013043972 0 W/13043972-13043972 FN3665-S SNP A -> C AC=1;AN=190;BQB=0.143794;DP=2731;DP4=1401,1198,14,27;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.17796e-17;MQSB=0.763331;RPB=0.982898;SGB=150.697;VDB=0.0682204;EFF=INTRON(MODIFIER||||330|LOC_Os10g25250|protein_coding|CODING|LOC_Os10g25250.1|2|1) FN-157.SNP.10:13044151 chr10:013044151 0 W/13044151-13044151 FN-157 Single Base Substitution A-T INTRON HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2666-S.SNP.10:13053586 chr10:013053586 0 W/13053586-13053586 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.98867;DP=4800;DP4=2159,2362,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06159e-15;MQSB=0.490496;RPB=0.984999;SGB=127.947;VDB=0.745546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2160-S.SNP.10:13064938 chr10:013064938 0 W/13064938-13064938 FN2160-S SNP C -> T AC=1;AN=168;BQB=0.0246567;DP=2698;DP4=882,1781,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00151888;MQSB=0.898786;RPB=0.886597;SGB=-17.5266;VDB=0.96255;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.10:13069544 chr10:013069544 0 W/13069544-13069544 FN2734-S SNP T -> G AC=1;AN=200;BQB=0.864093;DP=4819;DP4=2353,2225,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78628e-18;MQSB=0.936087;RPB=0.919224;SGB=137.158;VDB=0.669342;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.10:13071906 chr10:013071906 0 W/13071906-13071906 FN718-S Single Base Substitution A-G INTERGENIC HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN2411.SNP.10:13072706 chr10:013072706 0 W/13072706-13072706 FN2411 SNP C -> T AC=1;AN=200;BQB=0.999698;DP=4883;DP4=2286,2237,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.09925e-17;MQSB=0.98272;RPB=0.787679;SGB=-4.03268;VDB=0.963178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3679-S.SNP.10:13072854 chr10:013072854 0 W/13072854-13072854 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.998609;DP=2655;DP4=1348,1200,14,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40667e-13;MQSB=0.975011;RPB=0.993363;SGB=99.1879;VDB=0.16318;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.10:13077029 chr10:013077029 0 W/13077029-13077029 FN302-S Single Base Substitution T-G INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN-344.SNP.10:13083659 chr10:013083659 0 W/13083659-13083659 FN-344 Single Base Substitution C-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2730-S.SNP.10:13090494 chr10:013090494 0 W/13090494-13090494 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.373984;DP=4423;DP4=2241,1929,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81697e-08;MQSB=0.999577;RPB=0.935894;SGB=-15.5309;VDB=0.948051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A132T|277|LOC_Os10g25310|protein_coding|CODING|LOC_Os10g25310.1|3|1) FN1227-S.SNP.10:13101687 chr10:013101687 0 W/13101687-13101687 FN1227-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1635-S.SNP.10:13103904 chr10:013103904 0 W/13103904-13103904 FN1635-S SNP C -> T AC=1;AN=188;BQB=0.372921;DP=1584;DP4=493,1034,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00031929;MQSB=0.767349;RPB=0.931959;SGB=-17.7162;VDB=0.352739;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.10:13103906 chr10:013103906 0 W/13103906-13103906 FN1635-S SNP G -> T AC=1;AN=188;BQB=0.999917;DP=1568;DP4=489,1029,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.37863e-05;MQSB=0.749048;RPB=0.601805;SGB=26.2637;VDB=0.345209;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.10:13104168 chr10:013104168 0 W/13104168-13104168 FN3819-S SNP T -> A AC=2;AN=190;BQB=0.18192;DP=2565;DP4=1030,1311,8,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.4546e-06;MQSB=0.995649;RPB=0.337849;SGB=44.0907;VDB=0.937283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.10:13104427 chr10:013104427 0 W/13104427-13104427 FN2592-S SNP C -> T AC=1;AN=198;BQB=0.0497263;DP=3628;DP4=1699,1708,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20324e-08;MQSB=0.0310321;RPB=0.910766;SGB=10.9445;VDB=0.240621;EFF=INTERGENIC(MODIFIER||||||||||1) FN967-S.SNP.10:13105237 chr10:013105237 0 W/13105237-13105237 FN967-S Single Base Substitution C-G INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2680-S.SNP.10:13106822 chr10:013106822 0 W/13106822-13106822 FN2680-S SNP A -> T AC=1;AN=200;BQB=0.961996;DP=4999;DP4=2311,2456,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9067e-12;MQSB=0.992704;RPB=0.969259;SGB=91.1059;VDB=0.942041;EFF=INTRON(MODIFIER||||409|LOC_Os10g25340|protein_coding|CODING|LOC_Os10g25340.1|2|1) FN490-S.SNP.10:13108715 chr10:013108715 0 W/13108715-13108715 FN490-S Single Base Substitution C-T INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN1106-S.SNP.10:13112597 chr10:013112597 0 W/13112597-13112597 FN1106-S Single Base Substitution A-C INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN-384.SNP.10:13113292 chr10:013113292 0 W/13113292-13113292 FN-384 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g25360 signal peptide peptidase domain containing protein, expressed SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1035-S.SNP.10:13115550 chr10:013115550 0 W/13115550-13115550 FN1035-S Single Base Substitution G-A INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN4174-S.SNP.10:13117657 chr10:013117657 0 W/13117657-13117657 FN4174-S SNP G -> A AC=1;AN=170;BQB=0.976678;DP=2327;DP4=1166,1090,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.33417e-05;MQSB=0.999323;RPB=0.997057;SGB=38.987;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.10:13118157 chr10:013118157 0 W/13118157-13118157 FN1269-S Single Base Substitution G-T INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN-268.SNP.10:13120925 chr10:013120925 0 W/13120925-13120925 FN-268 Single Base Substitution C-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3668-S.SNP.10:13122731 chr10:013122731 0 W/13122731-13122731 FN3668-S SNP G -> A AC=1;AN=190;BQB=0.74774;DP=2744;DP4=1082,1543,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.40628e-07;MQSB=0.997309;RPB=0.45813;SGB=49.0954;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.10:13126934 chr10:013126934 0 W/13126934-13126934 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.996351;DP=2142;DP4=1169,899,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.5525e-05;MQSB=0.914718;RPB=0.223236;SGB=35.4339;VDB=0.123208;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A252|386|LOC_Os10g25380|protein_coding|CODING|LOC_Os10g25380.1|4|1) FN4041-S.SNP.10:13129237 chr10:013129237 0 W/13129237-13129237 FN4041-S SNP C -> T AC=1;AN=168;BQB=0.636319;DP=2215;DP4=979,1136,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00305194;MQSB=0.830755;RPB=0.824535;SGB=30.0193;VDB=0.85857;EFF=INTERGENIC(MODIFIER||||||||||1) FN894-S.SNP.10:13137452 chr10:013137452 0 W/13137452-13137452 FN894-S Single Base Substitution C-T INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1573-S.SNP.10:13142020 chr10:013142020 0 W/13142020-13142020 FN1573-S Single Base Substitution G-A INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2696-S.SNP.10:13147824 chr10:013147824 0 W/13147824-13147824 FN2696-S SNP A -> G AC=1;AN=200;BQB=0.559167;DP=4213;DP4=1984,1990,11,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00166152;MQB=0.175769;MQSB=0.97372;RPB=0.530251;SGB=54.6902;VDB=0.286472;EFF=INTERGENIC(MODIFIER||||||||||1) FN-234.SNP.10:13150706 chr10:013150706 0 W/13150706-13150706 FN-234 Single Base Substitution C-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3869-S.SNP.10:13151484 chr10:013151484 0 W/13151484-13151484 FN3869-S SNP A -> G AC=2;AN=158;BQB=0.791362;DP=2422;DP4=1174,1155,11,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.12698e-12;MQSB=0.931785;RPB=0.384689;SGB=45.1437;VDB=0.100322;EFF=INTRON(MODIFIER||||377|LOC_Os10g25430|protein_coding|CODING|LOC_Os10g25430.1|5|1) FN1047-S.SNP.10:13152008 chr10:013152008 0 W/13152008-13152008 FN1047-S Single Base Substitution C-G INTRON HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-106.SNP.10:13155865 chr10:013155865 0 W/13155865-13155865 FN-106 Single Base Substitution G-A INTERGENIC HET SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2311.SNP.10:13167537 chr10:013167537 0 W/13167537-13167537 FN2311 SNP G -> A AC=1;AN=192;BQB=0.997528;DP=5192;DP4=2456,2414,17,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000192604;MQB=4.62572e-18;MQSB=0.770588;RPB=0.939902;SGB=-86.0356;VDB=0.879366;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.10:13170475 chr10:013170475 0 W/13170475-13170475 FN1529-S Single Base Substitution A-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN4143-S.SNP.10:13171005 chr10:013171005 0 W/13171005-13171005 FN4143-S SNP T -> A AC=1;AN=170;BQB=0.57548;DP=2541;DP4=1104,1332,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.99868e-06;MQSB=0.964207;RPB=0.692846;SGB=38.3207;VDB=0.189882;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.10:13181040 chr10:013181040 0 W/13181040-13181040 FN2418 SNP A -> T AC=1;AN=200;BQB=0.967868;DP=4686;DP4=2250,2215,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47558e-05;MQSB=0.83578;RPB=0.398151;SGB=25.849;VDB=0.306317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N6I|673|LOC_Os10g25487|protein_coding|CODING|LOC_Os10g25487.1|2|1) FN319-S.SNP.10:13190333 chr10:013190333 0 W/13190333-13190333 FN319-S Single Base Substitution G-A INTERGENIC HOMO SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN3395-S.SNP.10:13193180 chr10:013193180 0 W/13193180-13193180 FN3395-S SNP G -> A AC=2;AN=184;BQB=0.8418;DP=3975;DP4=1785,2051,19,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.2253e-19;MQSB=0.996815;RPB=0.542091;SGB=134.358;VDB=0.0879493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E114K|542|LOC_Os10g25502|protein_coding|CODING|LOC_Os10g25502.1|2|1) FN2488.SNP.10:13193253 chr10:013193253 0 W/13193253-13193253 FN2488 SNP T -> C AC=1;AN=200;BQB=0.995837;DP=4468;DP4=1904,1787,30,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73399e-22;MQSB=0.853921;RPB=0.623438;SGB=-235.982;VDB=0.160533;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V138A|542|LOC_Os10g25502|protein_coding|CODING|LOC_Os10g25502.1|2|1) FN3911-S.SNP.10:13195487 chr10:013195487 0 W/13195487-13195487 FN3911-S SNP C -> T AC=2;AN=158;BQB=0.997286;DP=2258;DP4=1097,1057,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.72688e-10;MQSB=0.885716;RPB=0.972079;SGB=82.0227;VDB=0.00190498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.10:13203684 chr10:013203684 0 W/13203684-13203684 FN2666-S SNP G -> A AC=1;AN=200;BQB=0.962087;DP=6405;DP4=3612,2459,4,13;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.270258;MQB=0.0461783;MQSB=0;RPB=0.978663;SGB=51.0851;VDB=0.525994;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P861|1784|LOC_Os10g25530|protein_coding|CODING|LOC_Os10g25530.1|3|1) FN2788-S.SNP.10:13203684 chr10:013203684 0 W/13203684-13203684 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.710702;DP=5341;DP4=3106,1981,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=23;MQ0F=0.280846;MQB=0.0368169;MQSB=0;RPB=0.0611626;SGB=97.671;VDB=0.446054;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P861|1784|LOC_Os10g25530|protein_coding|CODING|LOC_Os10g25530.1|3|1) FN3657-S.SNP.10:13203684 chr10:013203684 0 W/13203684-13203684 FN3657-S SNP G -> A AC=1;AN=190;BQB=0.999908;DP=4133;DP4=2348,1662,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.209291;MQB=0.21145;MQSB=0.000642443;RPB=0.320581;SGB=80.9724;VDB=0.0402046;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P861|1784|LOC_Os10g25530|protein_coding|CODING|LOC_Os10g25530.1|3|1) FN419-S.SNP.10:13205127 chr10:013205127 0 W/13205127-13205127 FN419-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g25530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2774-S.SNP.10:13221130 chr10:013221130 0 W/13221130-13221130 FN2774-S SNP A -> T AC=1;AN=198;BQB=0.726771;DP=4732;DP4=2443,2131,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000211327;MQB=1.35928e-12;MQSB=0.93047;RPB=0.910264;SGB=61.7198;VDB=0.0523451;EFF=INTRON(MODIFIER||||389|LOC_Os10g25550|protein_coding|CODING|LOC_Os10g25550.1|3|1) FN963-S.SNP.10:13235033 chr10:013235033 0 W/13235033-13235033 FN963-S Single Base Substitution C-T INTRON HOMO SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3866-S.SNP.10:13235612 chr10:013235612 0 W/13235612-13235612 FN3866-S SNP T -> C AC=1;AN=158;BQB=0.928981;DP=2241;DP4=1019,1084,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.884e-08;MQSB=0.999935;RPB=0.999648;SGB=37.4429;VDB=0.269766;EFF=INTRON(MODIFIER||||452|LOC_Os10g25560|protein_coding|CODING|LOC_Os10g25560.1|3|1) FN1553-S.SNP.10:13235750 chr10:013235750 0 W/13235750-13235750 FN1553-S Single Base Substitution A-G INTRON HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN833-S.SNP.10:13236626 chr10:013236626 0 W/13236626-13236626 FN833-S Single Base Substitution C-A INTRON HET SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN941-S.SNP.10:13241432 chr10:013241432 0 W/13241432-13241432 FN941-S Single Base Substitution A-C INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2619-S.SNP.10:13252405 chr10:013252405 0 W/13252405-13252405 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.0815172;DP=4110;DP4=1972,1917,21,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.95219e-27;MQSB=0.929643;RPB=0.637182;SGB=148.003;VDB=0.110082;EFF=INTRON(MODIFIER||||504|LOC_Os10g25565|protein_coding|CODING|LOC_Os10g25565.1|1|1) FN809-S.SNP.10:13256928 chr10:013256928 0 W/13256928-13256928 FN809-S Single Base Substitution T-G INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3381-S.SNP.10:13262247 chr10:013262247 0 W/13262247-13262247 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.919448;DP=2787;DP4=1131,1569,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.52162e-11;MQSB=0.584058;RPB=0.832932;SGB=75.8731;VDB=0.981702;EFF=INTERGENIC(MODIFIER||||||||||1) FN-228.SNP.10:13274191 chr10:013274191 0 W/13274191-13274191 FN-228 Single Base Substitution T-A INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN486-S.SNP.10:13291615 chr10:013291615 0 W/13291615-13291615 FN486-S Single Base Substitution A-T INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3437-S.SNP.10:13313934 chr10:013313934 0 W/13313934-13313934 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.835357;DP=3628;DP4=1506,1948,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0016538;MQB=2.19241e-08;MQSB=0.475768;RPB=0.998818;SGB=9.8459;VDB=0.682472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.10:13314587 chr10:013314587 0 W/13314587-13314587 FN1072-S Single Base Substitution C-G INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN2752-S.SNP.10:13322043 chr10:013322043 0 W/13322043-13322043 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.602341;DP=4702;DP4=2131,2346,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212675;MQB=3.16857e-09;MQSB=0.890837;RPB=0.790351;SGB=81.8956;VDB=0.799779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1154T|1245|LOC_Os10g25720|protein_coding|CODING|LOC_Os10g25720.1|2|1) FN-210.SNP.10:13323163 chr10:013323163 0 W/13323163-13323163 FN-210 Single Base Substitution T-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN2487.SNP.10:13326543 chr10:013326543 0 W/13326543-13326543 FN2487 SNP C -> T AC=2;AN=200;BQB=0.782553;DP=3241;DP4=1311,1728,14,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.43149e-11;MQSB=0.192983;RPB=0.730563;SGB=76.3213;VDB=0.518143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.10:13328037 chr10:013328037 0 W/13328037-13328037 FN2297 SNP A -> G AC=1;AN=192;BQB=0.854932;DP=5097;DP4=2495,2156,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0260938;MQB=0.033659;MQSB=1.70465e-10;RPB=0.999531;SGB=46.8644;VDB=0.997189;EFF=INTRON(MODIFIER||||59|LOC_Os10g25730|protein_coding|CODING|LOC_Os10g25730.1|1|1) FN360-S.SNP.10:13330774 chr10:013330774 0 W/13330774-13330774 FN360-S Single Base Substitution G-A INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-181.SNP.10:13331810 chr10:013331810 0 W/13331810-13331810 FN-181 Single Base Substitution G-A INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-315.SNP.10:13337630 chr10:013337630 0 W/13337630-13337630 FN-315 Single Base Substitution C-T INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-315.SNP.10:13337638 chr10:013337638 0 W/13337638-13337638 FN-315 Single Base Substitution C-T INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2280-S.SNP.10:13339703 chr10:013339703 0 W/13339703-13339703 FN2280-S SNP C -> A AC=1;AN=190;BQB=0.996385;DP=4109;DP4=1876,1937,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000243368;MQB=5.34268e-10;MQSB=0.563543;RPB=0.949291;SGB=90.0802;VDB=0.174014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R22M|120|LOC_Os10g25740|protein_coding|CODING|LOC_Os10g25740.1|1|1) FN1239-S.SNP.10:13340489 chr10:013340489 0 W/13340489-13340489 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2454.SNP.10:13342061 chr10:013342061 0 W/13342061-13342061 FN2454 SNP C -> G AC=1;AN=200;BQB=0.45645;DP=4007;DP4=1846,1943,10,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00124782;MQB=6.50665e-05;MQSB=6.70108e-07;RPB=0.664009;SGB=45.1159;VDB=0.140868;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G549R|774|LOC_Os10g25750|protein_coding|CODING|LOC_Os10g25750.1|4|1) FN-171.SNP.10:13349067 chr10:013349067 0 W/13349067-13349067 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN4143-S.SNP.10:13361412 chr10:013361412 0 W/13361412-13361412 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.808058;DP=2729;DP4=1374,1286,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.14895e-08;MQSB=0.979786;RPB=0.730144;SGB=70.0854;VDB=0.937465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E183K|589|LOC_Os10g25780|protein_coding|CODING|LOC_Os10g25780.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E155K|561|LOC_Os10g25780|protein_coding|CODING|LOC_Os10g25780.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E155K|561|LOC_Os10g25780|protein_coding|CODING|LOC_Os10g25780.3|1|1) FN3707-S.SNP.10:13365907 chr10:013365907 0 W/13365907-13365907 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.773182;DP=2936;DP4=1281,1537,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.99275e-08;MQSB=0.945162;RPB=0.643327;SGB=26.2136;VDB=0.676351;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.10:13366476 chr10:013366476 0 W/13366476-13366476 FN470-S Single Base Substitution A-G INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1113-S.SNP.10:13369523 chr10:013369523 0 W/13369523-13369523 FN1113-S Single Base Substitution C-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3723-S.SNP.10:13376507 chr10:013376507 0 W/13376507-13376507 FN3723-S SNP A -> G AC=1;AN=190;BQB=0.624514;DP=2112;DP4=897,900,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000247659;MQSB=0.919825;RPB=0.507341;SGB=-0.550507;VDB=0.0603829;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.10:13393427 chr10:013393427 0 W/13393427-13393427 FN-127 Single Base Substitution G-A INTRON HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-212.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN-212 Single Base Substitution C-A INTRON HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-353.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN-353 Single Base Substitution C-A INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1027-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN1027-S Single Base Substitution C-A INTRON HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1400-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN1400-S Single Base Substitution C-A INTRON HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1638-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN1638-S Single Base Substitution C-A INTRON HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2257-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN2257-S SNP C -> A AC=1;AN=190;BQB=0.39385;DP=5133;DP4=2489,2248,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.53598e-17;MQSB=0.774677;RPB=0.998275;SGB=27.4193;VDB=0.643754;EFF=INTRON(MODIFIER||||166|LOC_Os10g25850|protein_coding|CODING|LOC_Os10g25850.1|3|1) FN2709-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN2709-S SNP C -> A AC=1;AN=200;BQB=0.130002;DP=5038;DP4=2461,2279,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.93775e-11;MQSB=0.964703;RPB=0.976349;SGB=19.1209;VDB=0.303109;EFF=INTRON(MODIFIER||||166|LOC_Os10g25850|protein_coding|CODING|LOC_Os10g25850.1|3|1) FN3652-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN3652-S SNP C -> A AC=2;AN=190;BQB=0.907754;DP=2943;DP4=1434,1343,19,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.22726e-17;MQSB=0.989628;RPB=0.906627;SGB=121.957;VDB=0.351099;EFF=INTRON(MODIFIER||||166|LOC_Os10g25850|protein_coding|CODING|LOC_Os10g25850.1|3|1) FN373-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN373-S Single Base Substitution C-A INTRON HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN4043-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN4043-S SNP C -> A AC=1;AN=168;BQB=0.597622;DP=2756;DP4=1336,1275,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.06234e-11;MQSB=0.95533;RPB=0.908675;SGB=36.7696;VDB=0.930123;EFF=INTRON(MODIFIER||||166|LOC_Os10g25850|protein_coding|CODING|LOC_Os10g25850.1|3|1) FN475-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN475-S Single Base Substitution C-A INTRON HOMO SNo: 474, Mutant_ID: FN475-S, Generation: M2, Mutations: 60, Genes: 107, Seed availability: Yes. FN793-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN793-S Single Base Substitution C-A INTRON HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN897-S.SNP.10:13397231 chr10:013397231 0 W/13397231-13397231 FN897-S Single Base Substitution C-A INTRON HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2593-S.SNP.10:13406799 chr10:013406799 0 W/13406799-13406799 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.904368;DP=3647;DP4=1552,1898,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.77877e-13;MQSB=0.510659;RPB=0.93651;SGB=100.095;VDB=0.658929;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.10:13412403 chr10:013412403 0 W/13412403-13412403 FN-146 Single Base Substitution C-T INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. W22-2-1.SNP.10:13416694 chr10:013416694 0 W/13416694-13416694 W22-2-1 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-334.SNP.10:13424894 chr10:013424894 0 W/13424894-13424894 FN-334 Single Base Substitution A-T INTERGENIC HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1504-S.SNP.10:13447174 chr10:013447174 0 W/13447174-13447174 FN1504-S Single Base Substitution G-A INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN3474-S.SNP.10:13448247 chr10:013448247 0 W/13448247-13448247 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.702964;DP=3045;DP4=1572,1390,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.21437e-08;MQSB=0.988553;RPB=0.993108;SGB=53.3568;VDB=0.0682516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.10:13450091 chr10:013450091 0 W/13450091-13450091 FN2386 SNP C -> T AC=1;AN=192;BQB=0.388077;DP=4025;DP4=1673,2027,4,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000129807;MQSB=0.726736;RPB=0.850534;SGB=44.6462;VDB=0.317696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G257S|472|LOC_Os10g25950|protein_coding|CODING|LOC_Os10g25950.1|2|1) FN3797-S.SNP.10:13456812 chr10:013456812 0 W/13456812-13456812 FN3797-S SNP C -> T AC=2;AN=190;BQB=0.867949;DP=2035;DP4=548,1361,2,6;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0108108;MQB=0.100038;MQSB=0.986193;RPB=0.964843;SGB=30.8803;VDB=0.283405;EFF=INTERGENIC(MODIFIER||||||||||1) FN-338.SNP.10:13461100 chr10:013461100 0 W/13461100-13461100 FN-338 Single Base Substitution G-A INTRON HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2412.SNP.10:13461896 chr10:013461896 0 W/13461896-13461896 FN2412 SNP C -> A AC=1;AN=200;BQB=0.30613;DP=4247;DP4=2136,1868,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.6598e-13;MQSB=0.264422;RPB=0.296893;SGB=52.9314;VDB=0.0845475;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.10:13465284 chr10:013465284 0 W/13465284-13465284 FN1545-S Single Base Substitution A-T INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2398.SNP.10:13465647 chr10:013465647 0 W/13465647-13465647 FN2398 SNP C -> T AC=1;AN=200;BQB=0.882436;DP=2967;DP4=1805,1000,6,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00270116;MQSB=0.0089436;RPB=0.993394;SGB=26.6347;VDB=0.308783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.10:13471033 chr10:013471033 0 W/13471033-13471033 FN2344 SNP G -> A AC=1;AN=192;BQB=0.413867;DP=4603;DP4=2233,2108,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.64109e-14;MQSB=0.991622;RPB=0.0707541;SGB=113.111;VDB=0.44394;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.10:13472029 chr10:013472029 0 W/13472029-13472029 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.849451;DP=3232;DP4=1625,1520,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.4714e-09;MQSB=0.966822;RPB=0.841655;SGB=75.8731;VDB=0.945189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3479-S.SNP.10:13474857 chr10:013474857 0 W/13474857-13474857 FN3479-S SNP T -> A AC=1;AN=184;BQB=0.652405;DP=3232;DP4=1292,1765,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.14661e-08;MQSB=0.923107;RPB=0.0334323;SGB=11.3677;VDB=0.112489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H217Q|1172|LOC_Os10g26030|protein_coding|CODING|LOC_Os10g26030.1|1|1) FN541-S.SNP.10:13475251 chr10:013475251 0 W/13475251-13475251 FN541-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g26030 retrotransposon protein, putative, unclassified, expressed SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2305.SNP.10:13479418 chr10:013479418 0 W/13479418-13479418 FN2305 SNP C -> G AC=1;AN=192;BQB=0.32436;DP=4588;DP4=2238,1971,17,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.83173e-14;MQSB=0.13991;RPB=0.992273;SGB=22.9983;VDB=0.72878;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.10:13481603 chr10:013481603 0 W/13481603-13481603 FN828-S Single Base Substitution A-T INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3479-S.SNP.10:13486323 chr10:013486323 0 W/13486323-13486323 FN3479-S SNP G -> T AC=1;AN=184;BQB=0.973865;DP=2688;DP4=1345,1254,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00111607;MQB=9.59894e-06;MQSB=0.901068;RPB=0.70998;SGB=35.1773;VDB=0.530978;EFF=INTRON(MODIFIER||||1222|LOC_Os10g26040|protein_coding|CODING|LOC_Os10g26040.1|5|1) FN1416-S.SNP.10:13488108 chr10:013488108 0 W/13488108-13488108 FN1416-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g26040 retrotransposon protein, putative, unclassified, expressed SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN-334.SNP.10:13491442 chr10:013491442 0 W/13491442-13491442 FN-334 Single Base Substitution C-T INTERGENIC HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2535-S.SNP.10:13495400 chr10:013495400 0 W/13495400-13495400 FN2535-S SNP A -> T AC=1;AN=198;BQB=0.991155;DP=3974;DP4=1932,1850,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33843e-11;MQSB=0.91301;RPB=0.874632;SGB=77.1196;VDB=0.361542;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N408I|632|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.1|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N408I|605|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N408I|540|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.3|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N274I|471|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.4|7|1) FN2262-S.SNP.10:13496673 chr10:013496673 0 W/13496673-13496673 FN2262-S SNP T -> C AC=2;AN=190;BQB=0.759599;DP=5349;DP4=2592,2479,39,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.18945e-32;MQSB=0.768022;RPB=0.851743;SGB=13.918;VDB=0.192576;EFF=UTR_3_PRIME(MODIFIER||486||540|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.3|12|1),UTR_3_PRIME(MODIFIER||121||632|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.1|12|1),UTR_3_PRIME(MODIFIER||121||605|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.2|13|1),UTR_3_PRIME(MODIFIER||121||471|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.4|12|1) FN2481.SNP.10:13496673 chr10:013496673 0 W/13496673-13496673 FN2481 SNP T -> C AC=2;AN=200;BQB=0.302143;DP=5192;DP4=2517,2398,20,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000192604;MQB=3.5261e-19;MQSB=0.504741;RPB=0.583858;SGB=144.819;VDB=0.36665;EFF=UTR_3_PRIME(MODIFIER||486||540|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.3|12|1),UTR_3_PRIME(MODIFIER||121||632|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.1|12|1),UTR_3_PRIME(MODIFIER||121||605|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.2|13|1),UTR_3_PRIME(MODIFIER||121||471|LOC_Os10g26050|protein_coding|CODING|LOC_Os10g26050.4|12|1) FN373-S.SNP.10:13496673 chr10:013496673 0 W/13496673-13496673 FN373-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN1660-S.SNP.10:13502029 chr10:013502029 0 W/13502029-13502029 FN1660-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g26070 pentatricopeptide, putative, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN836-S.SNP.10:13505826 chr10:013505826 0 W/13505826-13505826 FN836-S Single Base Substitution T-C INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN465-S.SNP.10:13507140 chr10:013507140 0 W/13507140-13507140 FN465-S Single Base Substitution A-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1211-S.SNP.10:13507695 chr10:013507695 0 W/13507695-13507695 FN1211-S Single Base Substitution T-C INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN-32.SNP.10:13514315 chr10:013514315 0 W/13514315-13514315 FN-32 Single Base Substitution T-C INTERGENIC Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN571-S.SNP.10:13515046 chr10:013515046 0 W/13515046-13515046 FN571-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN453-S.SNP.10:13518482 chr10:013518482 0 W/13518482-13518482 FN453-S Single Base Substitution C-T INTERGENIC HET SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN1535-S.SNP.10:13521887 chr10:013521887 0 W/13521887-13521887 FN1535-S Single Base Substitution G-T INTERGENIC HET SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN3825-S.SNP.10:13523788 chr10:013523788 0 W/13523788-13523788 FN3825-S SNP A -> C AC=2;AN=190;BQB=0.643077;DP=2461;DP4=1225,1128,11,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.09818e-18;MQSB=0.930852;RPB=0.995038;SGB=107.178;VDB=0.045078;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.10:13527354 chr10:013527354 0 W/13527354-13527354 FN670-S Single Base Substitution G-C INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN_N1-116-1.SNP.10:13529771 chr10:013529771 0 W/13529771-13529771 FN_N1-116-1 Single Base Substitution A-G Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN782-S.SNP.10:13531144 chr10:013531144 0 W/13531144-13531144 FN782-S Single Base Substitution G-A INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN977-S.SNP.10:13544906 chr10:013544906 0 W/13544906-13544906 FN977-S Single Base Substitution G-A INTRON HOMO SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN2242-S.SNP.10:13545095 chr10:013545095 0 W/13545095-13545095 FN2242-S SNP G -> T AC=1;AN=190;BQB=0.570568;DP=5108;DP4=2530,2302,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09496e-09;MQSB=0.620861;RPB=0.7291;SGB=43.2083;VDB=0.326706;EFF=INTRON(MODIFIER||||710|LOC_Os10g26140|protein_coding|CODING|LOC_Os10g26140.3|1|1),INTRON(MODIFIER||||726|LOC_Os10g26140|protein_coding|CODING|LOC_Os10g26140.1|2|1),INTRON(MODIFIER||||710|LOC_Os10g26140|protein_coding|CODING|LOC_Os10g26140.2|2|1),INTRON(MODIFIER||||666|LOC_Os10g26145|protein_coding|CODING|LOC_Os10g26145.1|2|1) FN1643-S.SNP.10:13550943 chr10:013550943 0 W/13550943-13550943 FN1643-S Single Base Substitution T-C INTRON Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN721-S.SNP.10:13563435 chr10:013563435 0 W/13563435-13563435 FN721-S Single Base Substitution T-A INTRON HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2191-S.SNP.10:13572712 chr10:013572712 0 W/13572712-13572712 FN2191-S SNP C -> T AC=1;AN=190;BQB=0.187983;DP=4474;DP4=1496,2647,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.116227;MQB=0.0195949;MQSB=9.60477e-25;RPB=0.351189;SGB=39.6545;VDB=0.42647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3399-S.SNP.10:13584174 chr10:013584174 0 W/13584174-13584174 FN3399-S SNP A -> G AC=2;AN=184;BQB=0.988198;DP=2909;DP4=1150,1667,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.89081e-13;MQSB=0.999495;RPB=0.170711;SGB=81.5311;VDB=0.408127;EFF=INTRON(MODIFIER||||395|LOC_Os10g26220|protein_coding|CODING|LOC_Os10g26220.1|1|1) FN2612-S.SNP.10:13584422 chr10:013584422 0 W/13584422-13584422 FN2612-S SNP A -> T AC=1;AN=198;BQB=0.944493;DP=3960;DP4=1816,1906,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21189e-08;MQSB=0.235547;RPB=0.772639;SGB=31.9395;VDB=0.926411;EFF=INTRON(MODIFIER||||395|LOC_Os10g26220|protein_coding|CODING|LOC_Os10g26220.1|1|1) FN942-S.SNP.10:13585047 chr10:013585047 0 W/13585047-13585047 FN942-S Single Base Substitution C-T INTRON HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN754-S.SNP.10:13585428 chr10:013585428 0 W/13585428-13585428 FN754-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1072-S.SNP.10:13585930 chr10:013585930 0 W/13585930-13585930 FN1072-S Single Base Substitution G-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3832-S.SNP.10:13590170 chr10:013590170 0 W/13590170-13590170 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.763349;DP=2771;DP4=1323,1328,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00469145;MQB=0.0207057;MQSB=0.897103;RPB=0.887814;SGB=28.9929;VDB=0.754408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.10:13593909 chr10:013593909 0 W/13593909-13593909 FN3064-S SNP G -> A AC=2;AN=184;BQB=0.870866;DP=3418;DP4=1269,2052,6,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.00415e-14;MQSB=0.992535;RPB=0.999746;SGB=98.4821;VDB=0.833733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G148D|182|LOC_Os10g26250|protein_coding|CODING|LOC_Os10g26250.1|1|1) FN2204-S.SNP.10:13594159 chr10:013594159 0 W/13594159-13594159 FN2204-S SNP C -> A AC=1;AN=190;BQB=0.980795;DP=4310;DP4=1714,2287,11,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02245e-14;MQSB=0.267516;RPB=0.602118;SGB=59.414;VDB=0.258535;EFF=INTRON(MODIFIER||||182|LOC_Os10g26250|protein_coding|CODING|LOC_Os10g26250.1|1|1) FN4279-S.SNP.10:13594694 chr10:013594694 0 W/13594694-13594694 FN4279-S SNP T -> C AC=2;AN=170;BQB=0.928588;DP=2835;DP4=1504,1195,14,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.64418e-15;MQSB=0.685532;RPB=0.905474;SGB=114.512;VDB=0.710274;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T268A|307|LOC_Os10g26260|protein_coding|CODING|LOC_Os10g26260.1|5|1) FN1764-S.SNP.10:13595663 chr10:013595663 0 W/13595663-13595663 FN1764-S SNP T -> A AC=1;AN=188;BQB=0.949481;DP=3432;DP4=1776,1629,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.6449e-09;MQSB=0.760296;RPB=0.786002;SGB=53.5223;VDB=0.491441;EFF=INTRON(MODIFIER||||307|LOC_Os10g26260|protein_coding|CODING|LOC_Os10g26260.1|3|1) FN1764-S.SNP.10:13595664 chr10:013595664 0 W/13595664-13595664 FN1764-S SNP G -> A AC=1;AN=188;BQB=0.623566;DP=3414;DP4=1755,1631,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.85524e-08;MQSB=0.746194;RPB=0.531183;SGB=5.5382;VDB=0.273428;EFF=INTRON(MODIFIER||||307|LOC_Os10g26260|protein_coding|CODING|LOC_Os10g26260.1|3|1) FN3387-S.SNP.10:13596520 chr10:013596520 0 W/13596520-13596520 FN3387-S SNP G -> A AC=1;AN=184;BQB=0.598225;DP=2807;DP4=1470,1256,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00076288;MQSB=0.997693;RPB=0.707999;SGB=21.6609;VDB=0.552312;EFF=INTRON(MODIFIER||||307|LOC_Os10g26260|protein_coding|CODING|LOC_Os10g26260.1|2|1) FN4203-S.SNP.10:13600694 chr10:013600694 0 W/13600694-13600694 FN4203-S SNP G -> A AC=1;AN=170;BQB=0.927867;DP=2665;DP4=1301,1290,10,17;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.89928e-17;MQSB=0.962509;RPB=0.934876;SGB=83.0751;VDB=0.755531;EFF=UTR_3_PRIME(MODIFIER||206||718|LOC_Os10g26280|protein_coding|CODING|LOC_Os10g26280.1|17|1) FN3541-S.SNP.10:13609803 chr10:013609803 0 W/13609803-13609803 FN3541-S SNP G -> A AC=1;AN=188;BQB=0.956683;DP=2809;DP4=1465,1263,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.41835e-05;MQSB=0.999791;RPB=0.422516;SGB=44.4357;VDB=0.737713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.10:13610698 chr10:013610698 0 W/13610698-13610698 FN1379-S Single Base Substitution A-G INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN1350-S.SNP.10:13613394 chr10:013613394 0 W/13613394-13613394 FN1350-S Single Base Substitution C-T INTRON HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN495-S.SNP.10:13619028 chr10:013619028 0 W/13619028-13619028 FN495-S Single Base Substitution G-A INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN3489-S.SNP.10:13628910 chr10:013628910 0 W/13628910-13628910 FN3489-S SNP G -> A AC=1;AN=184;BQB=0.0394162;DP=2822;DP4=1356,1366,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000576363;MQSB=0.0503084;RPB=0.957206;SGB=46.3132;VDB=0.996082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1764-S.SNP.10:13639975 chr10:013639975 0 W/13639975-13639975 FN1764-S SNP G -> T AC=1;AN=188;BQB=0.142008;DP=4047;DP4=1962,2052,8,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.0689e-08;MQSB=0.991617;RPB=0.970776;SGB=-66.2726;VDB=0.95276;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.10:13640841 chr10:013640841 0 W/13640841-13640841 FN-335 Single Base Substitution G-T INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN808-S.SNP.10:13645351 chr10:013645351 0 W/13645351-13645351 FN808-S Single Base Substitution C-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN-232.SNP.10:13654090 chr10:013654090 0 W/13654090-13654090 FN-232 Single Base Substitution T-C INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN491-S.SNP.10:13654216 chr10:013654216 0 W/13654216-13654216 FN491-S Single Base Substitution G-T INTERGENIC HET SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2462.SNP.10:13654772 chr10:013654772 0 W/13654772-13654772 FN2462 SNP G -> T AC=1;AN=200;BQB=0.888978;DP=4650;DP4=2008,2425,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.51561e-08;MQSB=0.887798;RPB=0.711048;SGB=19.0642;VDB=0.498311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.10:13667080 chr10:013667080 0 W/13667080-13667080 FN3699-S SNP C -> A AC=2;AN=190;BQB=0.836961;DP=2966;DP4=1047,1743,14,33;HOB=0.020831;ICB=0.494793;MQ=26;MQ0F=0.166554;MQB=0.996097;MQSB=0;RPB=0.819294;SGB=146.931;VDB=0.592396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D1446Y|1592|LOC_Os10g26360|protein_coding|CODING|LOC_Os10g26360.1|9|1) FN2533-S.SNP.10:13673727 chr10:013673727 0 W/13673727-13673727 FN2533-S SNP T -> G AC=1;AN=198;BQB=0.993387;DP=3891;DP4=1781,1911,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.92195e-07;MQSB=0.798813;RPB=0.586378;SGB=18.9639;VDB=0.283476;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.10:13676898 chr10:013676898 0 W/13676898-13676898 FN898-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g26370 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN-293.SNP.10:13677628 chr10:013677628 0 W/13677628-13677628 FN-293 Single Base Substitution C-A INTRON HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2661-S.SNP.10:13679096 chr10:013679096 0 W/13679096-13679096 FN2661-S SNP C -> A AC=1;AN=200;BQB=0.939144;DP=5130;DP4=2554,2281,12,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.19168e-11;MQSB=0.96319;RPB=0.839608;SGB=52.9314;VDB=0.50625;EFF=INTRON(MODIFIER||||1943|LOC_Os10g26370|protein_coding|CODING|LOC_Os10g26370.1|2|1) FN-356.SNP.10:13689192 chr10:013689192 0 W/13689192-13689192 FN-356 Single Base Substitution G-A INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1315-S.SNP.10:13689200 chr10:013689200 0 W/13689200-13689200 FN1315-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2719-S.SNP.10:13690425 chr10:013690425 0 W/13690425-13690425 FN2719-S SNP C -> A AC=1;AN=200;BQB=0.388873;DP=4318;DP4=2157,1943,4,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00379983;MQSB=0.803942;RPB=0.853757;SGB=40.4492;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.10:13704944 chr10:013704944 0 W/13704944-13704944 FN2557-S SNP G -> C AC=2;AN=198;BQB=0.782279;DP=4391;DP4=2094,2088,24,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.52005e-22;MQSB=0.6393;RPB=0.695115;SGB=130.027;VDB=0.634306;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.10:13712434 chr10:013712434 0 W/13712434-13712434 FN-258 Single Base Substitution A-T INTRON HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1613-S.SNP.10:13713231 chr10:013713231 0 W/13713231-13713231 FN1613-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN4135-S.SNP.10:13714958 chr10:013714958 0 W/13714958-13714958 FN4135-S SNP T -> C AC=2;AN=182;BQB=0.92553;DP=3109;DP4=1550,1442,11,30;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000321647;MQB=1.15383e-24;MQSB=0.94843;RPB=0.516103;SGB=179.437;VDB=0.121565;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.10:13720634 chr10:013720634 0 W/13720634-13720634 FN-122 Single Base Substitution C-T INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1448-S.SNP.10:13721016 chr10:013721016 0 W/13721016-13721016 FN1448-S Single Base Substitution G-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-226.SNP.10:13729649 chr10:013729649 0 W/13729649-13729649 FN-226 Single Base Substitution C-T INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-103.SNP.10:13729951 chr10:013729951 0 W/13729951-13729951 FN-103 Single Base Substitution A-C INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN3987-S.SNP.10:13733720 chr10:013733720 0 W/13733720-13733720 FN3987-S SNP T -> C AC=1;AN=168;BQB=0.901198;DP=2166;DP4=769,1289,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0023084;MQB=6.5672e-08;MQSB=0.0233522;RPB=0.999961;SGB=29.4772;VDB=0.68552;EFF=INTRON(MODIFIER||||1500|LOC_Os10g26420|protein_coding|CODING|LOC_Os10g26420.1|3|1) FN1704-S.SNP.10:13742240 chr10:013742240 0 W/13742240-13742240 FN1704-S SNP G -> A AC=1;AN=188;BQB=0.618915;DP=2462;DP4=1144,1250,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.65661e-07;MQSB=0.970769;RPB=0.0794524;SGB=26.0762;VDB=0.676351;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.10:13751668 chr10:013751668 0 W/13751668-13751668 FN1045-S Single Base Substitution A-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1513-S.SNP.10:13755282 chr10:013755282 0 W/13755282-13755282 FN1513-S Single Base Substitution A-C INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN3677-S.SNP.10:13764880 chr10:013764880 0 W/13764880-13764880 FN3677-S SNP G -> A AC=2;AN=190;BQB=0.971766;DP=2951;DP4=1486,1318,21,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.86967e-19;MQSB=0.984257;RPB=0.853071;SGB=77.2911;VDB=0.684092;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.10:13768800 chr10:013768800 0 W/13768800-13768800 FN1108-S Single Base Substitution T-C INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN-390.SNP.10:13769229 chr10:013769229 0 W/13769229-13769229 FN-390 Single Base Substitution C-T INTERGENIC HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3858-S.SNP.10:13776831 chr10:013776831 0 W/13776831-13776831 FN3858-S SNP T -> C AC=1;AN=158;BQB=0.987103;DP=2561;DP4=1231,1234,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.11689e-09;MQSB=0.89656;RPB=0.995806;SGB=40.8124;VDB=0.723986;EFF=INTERGENIC(MODIFIER||||||||||1) FN-390.SNP.10:13784008 chr10:013784008 0 W/13784008-13784008 FN-390 Single Base Substitution G-A INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN4022-S.SNP.10:13799848 chr10:013799848 0 W/13799848-13799848 FN4022-S SNP C -> T AC=2;AN=168;BQB=0.161144;DP=1347;DP4=462,535,3,16;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000742391;MQB=1.95721e-05;MQSB=1.16651e-07;RPB=0.783757;SGB=-17.7998;VDB=0.539981;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.10:13806450 chr10:013806450 0 W/13806450-13806450 FN-185 Single Base Substitution A-T UTR_3_PRIME HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN-342.SNP.10:13809827 chr10:013809827 0 W/13809827-13809827 FN-342 Single Base Substitution C-G INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1606-S.SNP.10:13811219 chr10:013811219 0 W/13811219-13811219 FN1606-S Single Base Substitution C-G INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1033-S.SNP.10:13812706 chr10:013812706 0 W/13812706-13812706 FN1033-S Single Base Substitution T-G INTRON HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3537-S.SNP.10:13819316 chr10:013819316 0 W/13819316-13819316 FN3537-S SNP C -> T AC=1;AN=188;BQB=0.98388;DP=2825;DP4=1314,1426,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44373e-05;MQSB=0.964627;RPB=0.597023;SGB=30.8063;VDB=0.924763;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.10:13820193 chr10:013820193 0 W/13820193-13820193 FN1033-S Single Base Substitution C-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3650-S.SNP.10:13826270 chr10:013826270 0 W/13826270-13826270 FN3650-S SNP A -> G AC=1;AN=190;BQB=0.867323;DP=2897;DP4=1416,1364,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42568e-08;MQSB=0.862207;RPB=0.469946;SGB=67.3108;VDB=0.374727;EFF=INTRON(MODIFIER||||428|LOC_Os10g26520|protein_coding|CODING|LOC_Os10g26520.1|4|1) FN3481-S.SNP.10:13838472 chr10:013838472 0 W/13838472-13838472 FN3481-S SNP T -> C AC=1;AN=184;BQB=0.808815;DP=2933;DP4=1178,1542,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.71441e-06;MQSB=0.827879;RPB=0.242973;SGB=18.2315;VDB=0.102551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1565-S.SNP.10:13842581 chr10:013842581 0 W/13842581-13842581 FN1565-S Single Base Substitution C-A INTERGENIC HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN-193.SNP.10:13848600 chr10:013848600 0 W/13848600-13848600 FN-193 Single Base Substitution T-G UTR_3_PRIME HET SNo: 193, Mutant_ID: FN-193, Generation: M2, Mutations: 44, Genes: 46, Seed availability: Yes. FN1106-S.SNP.10:13853879 chr10:013853879 0 W/13853879-13853879 FN1106-S Single Base Substitution G-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2618-S.SNP.10:13856162 chr10:013856162 0 W/13856162-13856162 FN2618-S SNP T -> A AC=1;AN=198;BQB=0.614727;DP=4341;DP4=2103,2100,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.57561e-11;MQSB=0.598535;RPB=0.999908;SGB=31.9395;VDB=0.0830043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.10:13859068 chr10:013859068 0 W/13859068-13859068 FN3551-S SNP C -> G AC=1;AN=188;BQB=0.937362;DP=2374;DP4=1185,1107,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.70112e-06;MQSB=0.705403;RPB=0.935313;SGB=35.3493;VDB=0.726018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.10:13860456 chr10:013860456 0 W/13860456-13860456 FN2279-S SNP A -> T AC=2;AN=190;BQB=0.787112;DP=5159;DP4=2558,2146,23,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000193836;MQB=1.36974e-27;MQSB=0.927323;RPB=0.786372;SGB=5.60984;VDB=0.89337;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.10:13865606 chr10:013865606 0 W/13865606-13865606 FN1707-S SNP C -> T AC=1;AN=188;BQB=0.251687;DP=4088;DP4=2197,1835,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.98255e-08;MQSB=0.999214;RPB=0.541321;SGB=-69.186;VDB=0.407153;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.10:13866161 chr10:013866161 0 W/13866161-13866161 FN3115-S SNP A -> C AC=2;AN=184;BQB=0.617032;DP=2772;DP4=1437,1227,20,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.89012e-16;MQSB=0.955586;RPB=0.230496;SGB=120.271;VDB=0.758645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1482-S.SNP.10:13871204 chr10:013871204 0 W/13871204-13871204 FN1482-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g26610 mandelonitrile lyase, putative, expressed SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN3815-S.SNP.10:13874469 chr10:013874469 0 W/13874469-13874469 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.804041;DP=2675;DP4=1476,1091,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000156462;MQSB=0.900156;RPB=0.985057;SGB=10.8904;VDB=0.617376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H67L|433|LOC_Os10g26610|protein_coding|CODING|LOC_Os10g26610.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H67L|433|LOC_Os10g26610|protein_coding|CODING|LOC_Os10g26610.2|2|1) FN2646-S.SNP.10:13888649 chr10:013888649 0 W/13888649-13888649 FN2646-S SNP T -> A AC=1;AN=200;BQB=0.71331;DP=5236;DP4=2472,2641,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60593e-11;MQSB=0.999108;RPB=0.502655;SGB=77.2904;VDB=0.148812;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.10:13890407 chr10:013890407 0 W/13890407-13890407 FN477-S Single Base Substitution T-A INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN768-S.SNP.10:13895621 chr10:013895621 0 W/13895621-13895621 FN768-S Single Base Substitution A-G INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN4111-S.SNP.10:13901945 chr10:013901945 0 W/13901945-13901945 FN4111-S SNP C -> A AC=1;AN=182;BQB=0.999985;DP=2516;DP4=1099,1341,14,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.42996e-17;MQSB=0.819949;RPB=0.874907;SGB=116.285;VDB=0.206311;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.10:13909150 chr10:013909150 0 W/13909150-13909150 FN957-S Single Base Substitution A-T INTERGENIC HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN4088-S.SNP.10:13914625 chr10:013914625 0 W/13914625-13914625 FN4088-S SNP A -> T AC=1;AN=182;BQB=0.727013;DP=2753;DP4=1246,1462,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.59092e-05;MQSB=0.999207;RPB=0.514988;SGB=18.0739;VDB=0.342481;EFF=INTRON(MODIFIER||||1270|LOC_Os10g26650|protein_coding|CODING|LOC_Os10g26650.1|5|1) FN-48.SNP.10:13916980 chr10:013916980 0 W/13916980-13916980 FN-48 Single Base Substitution T-A INTRON Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN-48.SNP.10:13916981 chr10:013916981 0 W/13916981-13916981 FN-48 Single Base Substitution G-A INTRON Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN_786-4-1.SNP.10:13919436 chr10:013919436 0 W/13919436-13919436 FN_786-4-1 Single Base Substitution C-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN1624-S.SNP.10:13926058 chr10:013926058 0 W/13926058-13926058 FN1624-S Single Base Substitution C-T INTERGENIC HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2711-S.SNP.10:13929773 chr10:013929773 0 W/13929773-13929773 FN2711-S SNP A -> T AC=1;AN=200;BQB=0.274838;DP=4976;DP4=2911,1783,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.07351e-11;MQSB=0.906137;RPB=0.310565;SGB=42.5108;VDB=0.292869;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.10:13933484 chr10:013933484 0 W/13933484-13933484 FN3748-S SNP A -> T AC=1;AN=190;BQB=0.966381;DP=2735;DP4=1317,1317,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27182e-08;MQSB=0.998041;RPB=0.661576;SGB=43.2083;VDB=0.420494;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V250D|336|LOC_Os10g26680|protein_coding|CODING|LOC_Os10g26680.1|5|1),UTR_3_PRIME(MODIFIER||246||205|LOC_Os10g26680|protein_coding|CODING|LOC_Os10g26680.2|5|1) FN753-S.SNP.10:13940259 chr10:013940259 0 W/13940259-13940259 FN753-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g26700 YGL010w, putative, expressed SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN2233-S.SNP.10:13944239 chr10:013944239 0 W/13944239-13944239 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.70566;DP=4670;DP4=2424,1967,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000214133;MQB=2.34057e-12;MQSB=0.796041;RPB=0.812468;SGB=90.0802;VDB=0.014156;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.10:13957069 chr10:013957069 0 W/13957069-13957069 FN4070-S SNP G -> A AC=1;AN=182;BQB=0.998994;DP=2921;DP4=1398,1438,13,19;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.38325e-19;MQSB=0.990384;RPB=0.193043;SGB=138.839;VDB=0.0499261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A258T|267|LOC_Os10g26730|protein_coding|CODING|LOC_Os10g26730.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A258T|493|LOC_Os10g26730|protein_coding|CODING|LOC_Os10g26730.1|5|1) FN785-S.SNP.10:13959154 chr10:013959154 0 W/13959154-13959154 FN785-S Single Base Substitution A-T INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3799-S.SNP.10:13962175 chr10:013962175 0 W/13962175-13962175 FN3799-S SNP A -> G AC=1;AN=190;BQB=0.690854;DP=2554;DP4=1309,1168,1,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0207518;MQB=0.0434301;MQSB=7.74696e-07;RPB=0.991705;SGB=39.9877;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.10:13962175 chr10:013962175 0 W/13962175-13962175 FN3861-S SNP A -> G AC=1;AN=158;BQB=0.972544;DP=2430;DP4=1227,1117,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0193416;MQB=0.000498652;MQSB=8.11473e-08;RPB=0.990595;SGB=60.1755;VDB=0.889314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2500.SNP.10:13964139 chr10:013964139 0 W/13964139-13964139 FN2500 SNP G -> A AC=1;AN=200;BQB=0.963608;DP=3971;DP4=1881,1861,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28112e-06;MQSB=0.910614;RPB=0.748154;SGB=25.849;VDB=0.379326;EFF=INTERGENIC(MODIFIER||||||||||1) FN1677-S.SNP.10:13964478 chr10:013964478 0 W/13964478-13964478 FN1677-S SNP G -> C AC=1;AN=188;BQB=0.49067;DP=3097;DP4=1695,1364,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30979e-06;MQSB=0.993761;RPB=0.0389336;SGB=7.0815;VDB=0.0340193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.10:13965266 chr10:013965266 0 W/13965266-13965266 FN3716-S SNP G -> A AC=1;AN=190;BQB=0.980386;DP=2997;DP4=1424,1485,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34131e-07;MQSB=0.888244;RPB=0.193606;SGB=44.5415;VDB=0.257671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.10:13969941 chr10:013969941 0 W/13969941-13969941 FN2370 SNP C -> T AC=1;AN=192;BQB=0.989357;DP=7993;DP4=3475,3770,26,24;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.0831978;MQB=0.602229;MQSB=0;RPB=0.932356;SGB=58.9783;VDB=0.0371086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.10:13969950 chr10:013969950 0 W/13969950-13969950 FN2370 SNP T -> G AC=1;AN=192;BQB=0.983851;DP=8131;DP4=3658,4115,24,22;HOB=5.42535e-05;ICB=0.000109072;MQ=29;MQ0F=0.0895339;MQB=0.497927;MQSB=0;RPB=0.698915;SGB=103.28;VDB=0.108329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.10:13970868 chr10:013970868 0 W/13970868-13970868 FN3889-S SNP A -> G AC=1;AN=158;BQB=0.975329;DP=2126;DP4=912,1152,2,7;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0211665;MQB=0.00350253;MQSB=1.51456e-10;RPB=0.407469;SGB=33.9591;VDB=0.198714;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.10:13972551 chr10:013972551 0 W/13972551-13972551 FN895-S Single Base Substitution C-G INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN-250.SNP.10:13976517 chr10:013976517 0 W/13976517-13976517 FN-250 Single Base Substitution A-C INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN1129-S.SNP.10:13982698 chr10:013982698 0 W/13982698-13982698 FN1129-S Single Base Substitution C-T INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN3298-S.SNP.10:13989708 chr10:013989708 0 W/13989708-13989708 FN3298-S SNP A -> T AC=2;AN=182;BQB=0.822319;DP=2149;DP4=1193,805,7,3;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.09217e-05;MQSB=0.996741;RPB=0.829442;SGB=25.1826;VDB=0.0705986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.10:13989709 chr10:013989709 0 W/13989709-13989709 FN3298-S SNP T -> A AC=2;AN=182;BQB=0.926221;DP=2145;DP4=1215,846,7,2;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.9108e-06;MQSB=0.951711;RPB=0.590162;SGB=35.1773;VDB=0.0337118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.10:13990663 chr10:013990663 0 W/13990663-13990663 FN2784-S SNP G -> A AC=2;AN=198;BQB=0.138594;DP=4329;DP4=1737,2224,27,33;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.92772e-28;MQSB=0.838698;RPB=0.124945;SGB=195.364;VDB=0.934685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.10:13993097 chr10:013993097 0 W/13993097-13993097 FN3543-S SNP T -> C AC=1;AN=188;BQB=0.257186;DP=2467;DP4=1345,974,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00140283;MQSB=0.991019;RPB=0.915799;SGB=25.3545;VDB=0.891275;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.10:13996317 chr10:013996317 0 W/13996317-13996317 FN479-S Single Base Substitution C-T INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN391-S.SNP.10:13996322 chr10:013996322 0 W/13996322-13996322 FN391-S Single Base Substitution T-G INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2136-S.SNP.10:13997172 chr10:013997172 0 W/13997172-13997172 FN2136-S SNP A -> T AC=2;AN=168;BQB=0.484658;DP=3903;DP4=2034,1787,39,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.39593e-33;MQSB=0.933383;RPB=0.984122;SGB=-66.2565;VDB=0.542173;EFF=INTRON(MODIFIER||||941|LOC_Os10g26760|protein_coding|CODING|LOC_Os10g26760.1|1|1) FN4096-S.SNP.10:14005500 chr10:014005500 0 W/14005500-14005500 FN4096-S SNP C -> T AC=1;AN=182;BQB=0.936723;DP=2958;DP4=1617,1283,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.00878972;MQB=0.00454599;MQSB=0.0357164;RPB=0.829629;SGB=44.1115;VDB=0.766851;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S675L|980|LOC_Os10g26770|protein_coding|CODING|LOC_Os10g26770.1|3|1) FN868-S.SNP.10:14005809 chr10:014005809 0 W/14005809-14005809 FN868-S Single Base Substitution G-A INTRON HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN488-S.SNP.10:14015593 chr10:014015593 0 W/14015593-14015593 FN488-S Single Base Substitution C-G INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1468-S.SNP.10:14018423 chr10:014018423 0 W/14018423-14018423 FN1468-S Single Base Substitution T-A INTERGENIC Homo SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN846-S.SNP.10:14019870 chr10:014019870 0 W/14019870-14019870 FN846-S Single Base Substitution C-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2356.SNP.10:14026225 chr10:014026225 0 W/14026225-14026225 FN2356 SNP C -> T AC=1;AN=192;BQB=0.97493;DP=4948;DP4=2446,2186,10,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.419e-08;MQSB=0.557132;RPB=0.748143;SGB=-13.64;VDB=0.555508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.10:14031023 chr10:014031023 0 W/14031023-14031023 FN2232-S SNP T -> A AC=1;AN=190;BQB=0.100574;DP=4821;DP4=1772,2565,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0707322;MQB=0.764814;MQSB=4.91235e-24;RPB=0.944117;SGB=33.8752;VDB=0.877395;EFF=INTERGENIC(MODIFIER||||||||||1) FN1579-S.SNP.10:14031305 chr10:014031305 0 W/14031305-14031305 FN1579-S Single Base Substitution G-A INTERGENIC Homo SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN2719-S.SNP.10:14039808 chr10:014039808 0 W/14039808-14039808 FN2719-S SNP G -> T AC=1;AN=200;BQB=0.897235;DP=4459;DP4=2055,2105,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.35148e-07;MQSB=0.986123;RPB=0.327094;SGB=45.0543;VDB=0.296572;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.10:14044873 chr10:014044873 0 W/14044873-14044873 FN1423-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1433-S.SNP.10:14044873 chr10:014044873 0 W/14044873-14044873 FN1433-S Single Base Substitution A-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN3481-S.SNP.10:14048058 chr10:014048058 0 W/14048058-14048058 FN3481-S SNP T -> A AC=1;AN=184;BQB=0.763722;DP=2771;DP4=1359,1280,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.40265e-09;MQSB=0.679868;RPB=0.340066;SGB=93.9603;VDB=0.0403199;EFF=INTERGENIC(MODIFIER||||||||||1) FN3474-S.SNP.10:14052951 chr10:014052951 0 W/14052951-14052951 FN3474-S SNP G -> T AC=1;AN=184;BQB=0.887478;DP=2320;DP4=954,1201,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19692e-08;MQSB=0.997818;RPB=0.89454;SGB=49.835;VDB=0.462038;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.10:14056899 chr10:014056899 0 W/14056899-14056899 FN3666-S SNP C -> T AC=1;AN=190;BQB=0.990096;DP=2081;DP4=936,1017,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00666e-10;MQSB=0.917537;RPB=0.402577;SGB=80.9724;VDB=0.489429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.10:14059248 chr10:014059248 0 W/14059248-14059248 FN2460 SNP T -> C AC=1;AN=200;BQB=0.991926;DP=4864;DP4=2418,2250,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.35179e-11;MQSB=0.929638;RPB=0.882247;SGB=34.6953;VDB=0.287277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.10:14064535 chr10:014064535 0 W/14064535-14064535 FN2734-S SNP T -> C AC=1;AN=200;BQB=0.431001;DP=4747;DP4=2075,2487,12,14;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0294923;MQB=0.989893;MQSB=0.0343695;RPB=0.0798411;SGB=83.5316;VDB=0.996089;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.10:14070486 chr10:014070486 0 W/14070486-14070486 FN224-S Single Base Substitution G-A INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN-121.SNP.10:14080600 chr10:014080600 0 W/14080600-14080600 FN-121 Single Base Substitution C-T INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN2474.SNP.10:14080924 chr10:014080924 0 W/14080924-14080924 FN2474 SNP A -> G AC=1;AN=200;BQB=0.869635;DP=5518;DP4=2618,2452,35,24;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.092606;MQB=0.0922178;MQSB=0.0100236;RPB=0.253925;SGB=138.902;VDB=0.893141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F815S|1419|LOC_Os10g26830|protein_coding|CODING|LOC_Os10g26830.1|4|1) FN3479-S.SNP.10:14086453 chr10:014086453 0 W/14086453-14086453 FN3479-S SNP G -> T AC=1;AN=184;BQB=0.9609;DP=2482;DP4=1220,1187,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.43437e-06;MQSB=0.929378;RPB=0.924248;SGB=28.7043;VDB=0.284215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.10:14086508 chr10:014086508 0 W/14086508-14086508 FN3626-S SNP A -> C AC=2;AN=190;BQB=0.613854;DP=2811;DP4=1387,1278,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000355745;MQB=6.83911e-15;MQSB=0.961784;RPB=0.469679;SGB=64.5217;VDB=0.829466;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.10:14089602 chr10:014089602 0 W/14089602-14089602 FN-149 Single Base Substitution A-G INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1060-S.SNP.10:14090155 chr10:014090155 0 W/14090155-14090155 FN1060-S Single Base Substitution C-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2438.SNP.10:14095864 chr10:014095864 0 W/14095864-14095864 FN2438 SNP A -> T AC=1;AN=200;BQB=0.128606;DP=3567;DP4=1556,1321,8,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0476591;MQB=0.948727;MQSB=1.11861e-11;RPB=0.529931;SGB=-103.511;VDB=0.011628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R14W|98|LOC_Os10g26850|protein_coding|CODING|LOC_Os10g26850.1|1|1) FN-372.SNP.10:14104661 chr10:014104661 0 W/14104661-14104661 FN-372 Single Base Substitution T-A INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN809-S.SNP.10:14113948 chr10:014113948 0 W/14113948-14113948 FN809-S Single Base Substitution C-G INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN809-S.SNP.10:14113954 chr10:014113954 0 W/14113954-14113954 FN809-S Single Base Substitution G-A INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN626-S.SNP.10:14121983 chr10:014121983 0 W/14121983-14121983 FN626-S Single Base Substitution C-G INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3457-S.SNP.10:14122353 chr10:014122353 0 W/14122353-14122353 FN3457-S SNP C -> T AC=1;AN=184;BQB=0.96733;DP=2667;DP4=1159,1393,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000205466;MQSB=0.996169;RPB=0.983907;SGB=18.1394;VDB=0.930513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.10:14137163 chr10:014137163 0 W/14137163-14137163 FN1234-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1180-S.SNP.10:14142662 chr10:014142662 0 W/14142662-14142662 FN1180-S Single Base Substitution G-A INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1545-S.SNP.10:14143683 chr10:014143683 0 W/14143683-14143683 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN3875-S.SNP.10:14148939 chr10:014148939 0 W/14148939-14148939 FN3875-S SNP T -> A AC=1;AN=158;BQB=0.851168;DP=2326;DP4=1155,1050,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.90047e-10;MQSB=0.757317;RPB=0.525448;SGB=47.5512;VDB=0.687416;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.10:14158806 chr10:014158806 0 W/14158806-14158806 FN1217-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g26920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1217-S.SNP.10:14158807 chr10:014158807 0 W/14158807-14158807 FN1217-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g26920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2462.SNP.10:14159108 chr10:014159108 0 W/14159108-14159108 FN2462 SNP C -> T AC=2;AN=200;BQB=0.275966;DP=4419;DP4=2109,2058,19,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.22246e-21;MQSB=0.994409;RPB=0.225788;SGB=134.004;VDB=0.189092;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F106|1725|LOC_Os10g26920|protein_coding|CODING|LOC_Os10g26920.1|1|1) FN2462.SNP.10:14159109 chr10:014159109 0 W/14159109-14159109 FN2462 SNP A -> T AC=2;AN=200;BQB=0.996067;DP=4411;DP4=2041,2019,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.6137e-22;MQSB=0.998533;RPB=0.132904;SGB=130.399;VDB=0.220041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Tct|T107S|1725|LOC_Os10g26920|protein_coding|CODING|LOC_Os10g26920.1|1|1) FN_829-2-5.SNP.10:14160867 chr10:014160867 0 W/14160867-14160867 FN_829-2-5 Single Base Substitution G-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3580-S.SNP.10:14166441 chr10:014166441 0 W/14166441-14166441 FN3580-S SNP G -> A AC=1;AN=188;BQB=0.837966;DP=3264;DP4=1800,1400,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.91157e-07;MQSB=0.97939;RPB=0.23288;SGB=58.0655;VDB=0.741722;EFF=SPLICE_SITE_REGION(LOW||||720|LOC_Os10g26930|protein_coding|CODING|LOC_Os10g26930.1|4|1),INTRON(MODIFIER||||720|LOC_Os10g26930|protein_coding|CODING|LOC_Os10g26930.1|4|1) FN-71.SNP.10:14167524 chr10:014167524 0 W/14167524-14167524 FN-71 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN2534-S.SNP.10:14168185 chr10:014168185 0 W/14168185-14168185 FN2534-S SNP T -> C AC=1;AN=198;BQB=0.925283;DP=4134;DP4=1776,1921,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.07348e-05;MQSB=0.95702;RPB=0.0283872;SGB=-3.4115;VDB=0.0810895;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.10:14171010 chr10:014171010 0 W/14171010-14171010 FN-236 Single Base Substitution G-A INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3285-S.SNP.10:14174029 chr10:014174029 0 W/14174029-14174029 FN3285-S SNP A -> G AC=1;AN=184;BQB=0.966448;DP=2314;DP4=1182,1023,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07192e-07;MQSB=0.995566;RPB=0.634912;SGB=35.7479;VDB=0.315366;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.10:14174605 chr10:014174605 0 W/14174605-14174605 FN-71 Single Base Substitution A-G INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN972-S.SNP.10:14187524 chr10:014187524 0 W/14187524-14187524 FN972-S Single Base Substitution T-A INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN565-S.SNP.10:14189140 chr10:014189140 0 W/14189140-14189140 FN565-S Single Base Substitution A-G INTRON HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN3499-S.SNP.10:14189811 chr10:014189811 0 W/14189811-14189811 FN3499-S SNP A -> T AC=1;AN=188;BQB=0.438551;DP=2941;DP4=1570,1244,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.92368e-05;MQSB=0.996152;RPB=0.775736;SGB=3.99491;VDB=0.67157;EFF=INTRON(MODIFIER||||493|LOC_Os10g26950|protein_coding|CODING|LOC_Os10g26950.1|2|1) FN524-S.SNP.10:14201591 chr10:014201591 0 W/14201591-14201591 FN524-S Single Base Substitution T-G INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN3546-S.SNP.10:14202213 chr10:014202213 0 W/14202213-14202213 FN3546-S SNP G -> T AC=2;AN=188;BQB=0.956118;DP=2538;DP4=1281,1176,16,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.53419e-13;MQSB=0.999939;RPB=0.958802;SGB=98.9552;VDB=0.767802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.10:14204352 chr10:014204352 0 W/14204352-14204352 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.871652;DP=3131;DP4=1650,1328,24,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.55097e-23;MQSB=0.964399;RPB=0.950927;SGB=179.874;VDB=0.10032;EFF=INTERGENIC(MODIFIER||||||||||1) FN560-S.SNP.10:14207776 chr10:014207776 0 W/14207776-14207776 FN560-S Single Base Substitution G-A INTERGENIC HET SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN2239-S.SNP.10:14214759 chr10:014214759 0 W/14214759-14214759 FN2239-S SNP G -> T AC=1;AN=190;BQB=0.710204;DP=4285;DP4=1903,2101,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03234e-06;MQSB=0.0822704;RPB=0.978423;SGB=39.9877;VDB=0.895256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.10:14214760 chr10:014214760 0 W/14214760-14214760 FN2239-S SNP A -> T AC=1;AN=190;BQB=0.974127;DP=4295;DP4=1864,1980,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.77984e-06;MQSB=0.107603;RPB=0.79344;SGB=28.9929;VDB=0.9514;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.10:14216331 chr10:014216331 0 W/14216331-14216331 FN-371 Single Base Substitution A-C INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN-285.SNP.10:14217615 chr10:014217615 0 W/14217615-14217615 FN-285 Single Base Substitution T-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2163-S.SNP.10:14223103 chr10:014223103 0 W/14223103-14223103 FN2163-S SNP C -> G AC=2;AN=168;BQB=0.963326;DP=3791;DP4=1951,1774,22,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.88725e-20;MQSB=0.995306;RPB=0.970807;SGB=35.6687;VDB=0.180913;EFF=INTERGENIC(MODIFIER||||||||||1) FN-77.SNP.10:14232043 chr10:014232043 0 W/14232043-14232043 FN-77 Single Base Substitution G-C INTERGENIC HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN-88.SNP.10:14236349 chr10:014236349 0 W/14236349-14236349 FN-88 Single Base Substitution G-A INTERGENIC HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN1687-S.SNP.10:14244659 chr10:014244659 0 W/14244659-14244659 FN1687-S SNP T -> A AC=1;AN=188;BQB=0.340904;DP=1756;DP4=902,825,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.67167e-06;MQSB=0.899362;RPB=0.990232;SGB=58.0655;VDB=0.465585;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P797|868|LOC_Os10g27030|protein_coding|CODING|LOC_Os10g27030.1|4|1) FN3760-S.SNP.10:14246678 chr10:014246678 0 W/14246678-14246678 FN3760-S SNP G -> T AC=1;AN=190;BQB=0.993003;DP=2934;DP4=1240,1587,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.03329e-09;MQSB=0.998914;RPB=0.719445;SGB=67.3108;VDB=0.0929623;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S1112Y|1260|LOC_Os10g27040|protein_coding|CODING|LOC_Os10g27040.1|6|1) FN3431-S.SNP.10:14249149 chr10:014249149 0 W/14249149-14249149 FN3431-S SNP G -> C AC=1;AN=184;BQB=0.950858;DP=3915;DP4=1779,2050,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.93322e-09;MQSB=0.99836;RPB=0.980567;SGB=53.2642;VDB=0.293274;EFF=SPLICE_SITE_REGION(LOW||||1260|LOC_Os10g27040|protein_coding|CODING|LOC_Os10g27040.1|3|1),INTRON(MODIFIER||||1260|LOC_Os10g27040|protein_coding|CODING|LOC_Os10g27040.1|3|1) W138-2-1.SNP.10:14251949 chr10:014251949 0 W/14251949-14251949 W138-2-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g27040 retrotransposon protein, putative, unclassified, expressed SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN-52.SNP.10:14255429 chr10:014255429 0 W/14255429-14255429 FN-52 Single Base Substitution G-A INTERGENIC HOMO SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN542-S.SNP.10:14261055 chr10:014261055 0 W/14261055-14261055 FN542-S Single Base Substitution T-A INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN542-S.SNP.10:14261058 chr10:014261058 0 W/14261058-14261058 FN542-S Single Base Substitution T-A INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1711-S.SNP.10:14262416 chr10:014262416 0 W/14262416-14262416 FN1711-S SNP A -> T AC=2;AN=188;BQB=0.549944;DP=4008;DP4=1703,2248,20,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01066e-20;MQSB=0.969417;RPB=0.990434;SGB=-98.3201;VDB=0.769765;EFF=SPLICE_SITE_REGION(LOW||||298|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.1|5|1),SPLICE_SITE_REGION(LOW||||261|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.2|5|1),INTRON(MODIFIER||||298|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.1|5|1),INTRON(MODIFIER||||261|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.2|5|1) FN1711-S.SNP.10:14262417 chr10:014262417 0 W/14262417-14262417 FN1711-S SNP T -> G AC=2;AN=188;BQB=0.581486;DP=4015;DP4=1715,2240,18,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.1456e-21;MQSB=0.991618;RPB=0.977484;SGB=-98.3201;VDB=0.725585;EFF=SPLICE_SITE_REGION(LOW||||298|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.1|5|1),SPLICE_SITE_REGION(LOW||||261|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.2|5|1),INTRON(MODIFIER||||298|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.1|5|1),INTRON(MODIFIER||||261|LOC_Os10g27060|protein_coding|CODING|LOC_Os10g27060.2|5|1) FN399-S.SNP.10:14267564 chr10:014267564 0 W/14267564-14267564 FN399-S Single Base Substitution C-A INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN2185-S.SNP.10:14273203 chr10:014273203 0 W/14273203-14273203 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.00648806;DP=4827;DP4=1968,2411,19,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30265e-06;MQSB=0.244823;RPB=0.996765;SGB=-9.34484;VDB=0.666544;EFF=INTERGENIC(MODIFIER||||||||||1) FN-151.SNP.10:14277029 chr10:014277029 0 W/14277029-14277029 FN-151 Single Base Substitution C-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN-151.SNP.10:14277030 chr10:014277030 0 W/14277030-14277030 FN-151 Single Base Substitution C-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN848-S.SNP.10:14283324 chr10:014283324 0 W/14283324-14283324 FN848-S Single Base Substitution A-T INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN463-S.SNP.10:14284105 chr10:014284105 0 W/14284105-14284105 FN463-S Single Base Substitution G-A INTRON HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN2788-S.SNP.10:14301508 chr10:014301508 0 W/14301508-14301508 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.827832;DP=3344;DP4=1623,1506,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0194378;MQB=0.000691848;MQSB=0.765315;RPB=0.566921;SGB=54.144;VDB=0.922529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.10:14308622 chr10:014308622 0 W/14308622-14308622 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.113751;DP=2407;DP4=1132,1238,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00498546;MQB=0.0270459;MQSB=0.844751;RPB=0.835642;SGB=10.0307;VDB=0.675225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A292V|476|LOC_Os10g27150|protein_coding|CODING|LOC_Os10g27150.1|2|1) FN3502-S.SNP.10:14308622 chr10:014308622 0 W/14308622-14308622 FN3502-S SNP C -> T AC=2;AN=188;BQB=0.630631;DP=3012;DP4=1359,1577,12,12;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00431607;MQB=2.09569e-06;MQSB=0.623403;RPB=0.923108;SGB=46.4225;VDB=0.804412;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A292V|476|LOC_Os10g27150|protein_coding|CODING|LOC_Os10g27150.1|2|1) FN418-S.SNP.10:14309284 chr10:014309284 0 W/14309284-14309284 FN418-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g27150 transposon protein, putative, CACTA, En/Spm sub-class SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2630-S.SNP.10:14311684 chr10:014311684 0 W/14311684-14311684 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.923805;DP=4227;DP4=1977,1996,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.86822e-14;MQSB=0.840751;RPB=0.653581;SGB=123.342;VDB=0.38238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.10:14317354 chr10:014317354 0 W/14317354-14317354 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.923111;DP=2254;DP4=425,1628,4,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00588896;MQSB=6.82917e-29;RPB=0.97792;SGB=31.1689;VDB=0.15523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.10:14324351 chr10:014324351 0 W/14324351-14324351 FN1366-S Single Base Substitution T-A INTRON HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3913-S.SNP.10:14333903 chr10:014333903 0 W/14333903-14333903 FN3913-S SNP C -> A AC=1;AN=158;BQB=0.802796;DP=2637;DP4=1171,1367,12,10;HOB=8.01154e-05;ICB=0.000161245;MQ=30;MQ0F=0.0891164;MQB=0.981423;MQSB=0;RPB=0.371789;SGB=64.3985;VDB=0.163245;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.10:14344588 chr10:014344588 0 W/14344588-14344588 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.896973;DP=2682;DP4=1475,1139,13,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.2413e-13;MQSB=0.99629;RPB=0.632326;SGB=84.7091;VDB=0.608475;EFF=INTRON(MODIFIER||||502|LOC_Os10g27220|protein_coding|CODING|LOC_Os10g27220.1|5|1) FN3867-S.SNP.10:14353135 chr10:014353135 0 W/14353135-14353135 FN3867-S SNP A -> T AC=1;AN=158;BQB=0.82712;DP=2210;DP4=1020,1032,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=3.84672e-05;MQSB=0.181133;RPB=0.434383;SGB=11.9715;VDB=0.375317;EFF=INTERGENIC(MODIFIER||||||||||1) FN-225.SNP.10:14356938 chr10:014356938 0 W/14356938-14356938 FN-225 Single Base Substitution G-A INTERGENIC HOMO SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-225.SNP.10:14356939 chr10:014356939 0 W/14356939-14356939 FN-225 Single Base Substitution T-A INTERGENIC HOMO SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN4052-S.SNP.10:14358453 chr10:014358453 0 W/14358453-14358453 FN4052-S SNP C -> T AC=2;AN=168;BQB=0.251989;DP=2756;DP4=1263,1335,20,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.09499e-17;MQSB=0.841297;RPB=0.79378;SGB=85.386;VDB=0.479219;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S469N|605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S469N|605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.2|8|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S469N|605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.3|9|1),SPLICE_SITE_REGION(LOW||||605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.1|9|1),SPLICE_SITE_REGION(LOW||||605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.2|8|1),SPLICE_SITE_REGION(LOW||||605|LOC_Os10g27230|protein_coding|CODING|LOC_Os10g27230.3|9|1) FN840-S.SNP.10:14393026 chr10:014393026 0 W/14393026-14393026 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN840-S.SNP.10:14393027 chr10:014393027 0 W/14393027-14393027 FN840-S Single Base Substitution C-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN512-S.SNP.10:14394005 chr10:014394005 0 W/14394005-14394005 FN512-S Single Base Substitution A-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN840-S.SNP.10:14394590 chr10:014394590 0 W/14394590-14394590 FN840-S Single Base Substitution A-C INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN1389-S.SNP.10:14396361 chr10:014396361 0 W/14396361-14396361 FN1389-S Single Base Substitution C-T INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1696-S.SNP.10:14413720 chr10:014413720 0 W/14413720-14413720 FN1696-S SNP A -> T AC=2;AN=188;BQB=0.204522;DP=3898;DP4=1662,2173,20,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.33491e-22;MQSB=0.991737;RPB=0.945295;SGB=51.837;VDB=0.921876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1738-S.SNP.10:14413963 chr10:014413963 0 W/14413963-14413963 FN1738-S SNP C -> T AC=1;AN=188;BQB=0.987293;DP=3575;DP4=1679,1843,11,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.80205e-14;MQSB=0.972927;RPB=0.832749;SGB=-7.39363;VDB=0.0679533;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.10:14428357 chr10:014428357 0 W/14428357-14428357 FN542-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN542-S.SNP.10:14428358 chr10:014428358 0 W/14428358-14428358 FN542-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN2421.SNP.10:14428363 chr10:014428363 0 W/14428363-14428363 FN2421 SNP A -> G AC=2;AN=200;BQB=0.668621;DP=4929;DP4=2219,2363,26,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.82996e-22;MQSB=0.972393;RPB=0.850339;SGB=51.2243;VDB=0.79963;EFF=UTR_3_PRIME(MODIFIER||408||308|LOC_Os10g27340|protein_coding|CODING|LOC_Os10g27340.2|7|1) FN-250.SNP.10:14432880 chr10:014432880 0 W/14432880-14432880 FN-250 Single Base Substitution A-T INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN3948-S.SNP.10:14441079 chr10:014441079 0 W/14441079-14441079 FN3948-S SNP G -> A AC=1;AN=168;BQB=0.969749;DP=2429;DP4=1129,1206,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.0176e-12;MQSB=0.997578;RPB=0.992817;SGB=92.0501;VDB=0.121738;EFF=INTERGENIC(MODIFIER||||||||||1) FN537-S.SNP.10:14447756 chr10:014447756 0 W/14447756-14447756 FN537-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN418-S.SNP.10:14451468 chr10:014451468 0 W/14451468-14451468 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2789-S.SNP.10:14455527 chr10:014455527 0 W/14455527-14455527 FN2789-S SNP T -> A AC=1;AN=198;BQB=0.999603;DP=3881;DP4=2000,1662,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.63204e-13;MQSB=0.931644;RPB=0.399755;SGB=47.5102;VDB=0.234871;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.10:14458099 chr10:014458099 0 W/14458099-14458099 FN431-S Single Base Substitution G-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN3712-S.SNP.10:14466461 chr10:014466461 0 W/14466461-14466461 FN3712-S SNP G -> T AC=1;AN=190;BQB=0.962111;DP=3173;DP4=1407,1654,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.51019e-05;MQSB=0.978801;RPB=0.823065;SGB=35.4339;VDB=0.182763;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.10:14468460 chr10:014468460 0 W/14468460-14468460 FN795-S Single Base Substitution A-G INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1014-S.SNP.10:14474677 chr10:014474677 0 W/14474677-14474677 FN1014-S Single Base Substitution C-T INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1415-S.SNP.10:14481234 chr10:014481234 0 W/14481234-14481234 FN1415-S Single Base Substitution C-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1673-S.SNP.10:14484236 chr10:014484236 0 W/14484236-14484236 FN1673-S SNP T -> A AC=1;AN=188;BQB=0.00011909;DP=3784;DP4=1611,2112,21,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.83494e-07;MQSB=0.486722;RPB=0.916592;SGB=-249.159;VDB=0.122967;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.10:14486204 chr10:014486204 0 W/14486204-14486204 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.94151;DP=2947;DP4=1291,1562,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.58864e-08;MQSB=0.996617;RPB=0.832156;SGB=53.2642;VDB=0.318432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A142T|184|LOC_Os10g27460|protein_coding|CODING|LOC_Os10g27460.1|1|1) FN921-S.SNP.10:14489598 chr10:014489598 0 W/14489598-14489598 FN921-S Single Base Substitution C-A INTRON HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN2268-S.SNP.10:14520324 chr10:014520324 0 W/14520324-14520324 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.000837542;DP=3952;DP4=1472,1704,9,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000253036;MQB=1.61558e-06;MQSB=0.0146782;RPB=0.0239992;SGB=-210.293;VDB=0.00868675;EFF=START_GAINED(LOW||||84|LOC_Os10g28009|protein_coding|CODING|LOC_Os10g28009.1|1|1),UTR_5_PRIME(MODIFIER||3091||84|LOC_Os10g28009|protein_coding|CODING|LOC_Os10g28009.1|1|1) FN3784-S.SNP.10:14520686 chr10:014520686 0 W/14520686-14520686 FN3784-S SNP G -> A AC=1;AN=190;BQB=0.999644;DP=3037;DP4=1681,1236,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28788e-06;MQSB=0.975176;RPB=0.598335;SGB=49.0954;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.10:14522097 chr10:014522097 0 W/14522097-14522097 FN-93 Single Base Substitution T-G INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN2426.SNP.10:14530471 chr10:014530471 0 W/14530471-14530471 FN2426 SNP A -> C AC=2;AN=200;BQB=0.407914;DP=3766;DP4=1989,1511,23,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000265534;MQB=8.19753e-24;MQSB=0.865142;RPB=0.843465;SGB=170.056;VDB=0.0898985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.10:14538625 chr10:014538625 0 W/14538625-14538625 FN3432-S SNP G -> T AC=1;AN=184;BQB=0.855828;DP=2364;DP4=1152,1117,7,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.92891e-12;MQSB=0.983286;RPB=0.966342;SGB=40.9276;VDB=0.877637;EFF=INTRON(MODIFIER||||839|LOC_Os10g28020|protein_coding|CODING|LOC_Os10g28020.1|6|1),INTRON(MODIFIER||||822|LOC_Os10g28020|protein_coding|CODING|LOC_Os10g28020.2|6|1),INTRON(MODIFIER||||775|LOC_Os10g28020|protein_coding|CODING|LOC_Os10g28020.3|6|1),INTRON(MODIFIER||||775|LOC_Os10g28020|protein_coding|CODING|LOC_Os10g28020.4|6|1) FN982-S.SNP.10:14546323 chr10:014546323 0 W/14546323-14546323 FN982-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g28030 OsPOP22 - Putative Prolyl Oligopeptidase homologue, expressed SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN2698-S.SNP.10:14548165 chr10:014548165 0 W/14548165-14548165 FN2698-S SNP C -> A AC=1;AN=200;BQB=0.902867;DP=4702;DP4=2207,2185,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66774e-08;MQSB=0.896007;RPB=0.92391;SGB=7.88476;VDB=0.00559041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q718K|772|LOC_Os10g28030|protein_coding|CODING|LOC_Os10g28030.1|16|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q717K|771|LOC_Os10g28030|protein_coding|CODING|LOC_Os10g28030.2|16|1),SPLICE_SITE_REGION(LOW||||772|LOC_Os10g28030|protein_coding|CODING|LOC_Os10g28030.1|16|1),SPLICE_SITE_REGION(LOW||||771|LOC_Os10g28030|protein_coding|CODING|LOC_Os10g28030.2|16|1) FN2207-S.SNP.10:14559604 chr10:014559604 0 W/14559604-14559604 FN2207-S SNP T -> A AC=2;AN=190;BQB=0.558283;DP=4599;DP4=2107,2005,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.42125e-10;MQSB=0.419764;RPB=0.822971;SGB=44.0907;VDB=0.585418;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y197N|307|LOC_Os10g28050|protein_coding|CODING|LOC_Os10g28050.1|1|1) FN3522-S.SNP.10:14563562 chr10:014563562 0 W/14563562-14563562 FN3522-S SNP A -> C AC=1;AN=188;BQB=0.766317;DP=2611;DP4=1269,1256,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.65732e-05;MQSB=0.955747;RPB=0.46935;SGB=13.3597;VDB=0.443772;EFF=INTRON(MODIFIER||||523|LOC_Os10g28060|protein_coding|CODING|LOC_Os10g28060.1|1|1) FN1755-S.SNP.10:14568994 chr10:014568994 0 W/14568994-14568994 FN1755-S SNP A -> G AC=2;AN=188;BQB=0.0471208;DP=3954;DP4=1742,2097,36,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.02736e-19;MQSB=0.994862;RPB=0.693884;SGB=-765.55;VDB=0.00385768;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.10:14577077 chr10:014577077 0 W/14577077-14577077 FN411-S Single Base Substitution G-A INTERGENIC HET SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN-64.SNP.10:14582652 chr10:014582652 0 W/14582652-14582652 FN-64 Single Base Substitution C-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-64.SNP.10:14582653 chr10:014582653 0 W/14582653-14582653 FN-64 Single Base Substitution A-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN-269.SNP.10:14583552 chr10:014583552 0 W/14583552-14583552 FN-269 Single Base Substitution T-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2768-S.SNP.10:14583687 chr10:014583687 0 W/14583687-14583687 FN2768-S SNP C -> T AC=1;AN=198;BQB=0.452417;DP=4020;DP4=2474,1274,16,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16467e-08;MQSB=0.0807699;RPB=0.636471;SGB=-11.4553;VDB=0.533337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.10:14585146 chr10:014585146 0 W/14585146-14585146 FN2487 SNP C -> A AC=2;AN=200;BQB=0.186453;DP=4245;DP4=2089,1902,32,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29919e-22;MQSB=0.76339;RPB=0.213472;SGB=107.64;VDB=0.0661382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1266-S.SNP.10:14602857 chr10:014602857 0 W/14602857-14602857 FN1266-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g28120 glycosyl hydrolase, putative, expressed SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN1516-S.SNP.10:14604688 chr10:014604688 0 W/14604688-14604688 FN1516-S Single Base Substitution G-A INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN2558-S.SNP.10:14606848 chr10:014606848 0 W/14606848-14606848 FN2558-S SNP C -> T AC=1;AN=198;BQB=0.897707;DP=3825;DP4=1695,1912,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000261438;MQB=3.8517e-08;MQSB=0.562164;RPB=0.995606;SGB=54.144;VDB=0.275752;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V202|213|LOC_Os10g28130|protein_coding|CODING|LOC_Os10g28130.1|2|1) FN789-S.SNP.10:14610155 chr10:014610155 0 W/14610155-14610155 FN789-S Single Base Substitution T-A STOP_GAINED HET LOC_Os10g28140 retrotransposon protein, putative, unclassified, expressed SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN3561-S.SNP.10:14614513 chr10:014614513 0 W/14614513-14614513 FN3561-S SNP G -> A AC=1;AN=188;BQB=0.999984;DP=2383;DP4=1307,933,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.88364e-09;MQSB=0.484207;RPB=0.962906;SGB=50.1574;VDB=0.4996;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N435|800|LOC_Os10g28150|protein_coding|CODING|LOC_Os10g28150.1|2|1) FN4165-S.SNP.10:14615530 chr10:014615530 0 W/14615530-14615530 FN4165-S SNP C -> T AC=1;AN=170;BQB=0.890156;DP=2385;DP4=1362,926,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.81935e-06;MQSB=0.560826;RPB=0.668638;SGB=38.987;VDB=0.309361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R133K|800|LOC_Os10g28150|protein_coding|CODING|LOC_Os10g28150.1|1|1) FN-346.SNP.10:14619522 chr10:014619522 0 W/14619522-14619522 FN-346 Single Base Substitution C-T INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2165-S.SNP.10:14621106 chr10:014621106 0 W/14621106-14621106 FN2165-S SNP G -> A AC=1;AN=168;BQB=5.20405e-06;DP=3476;DP4=1580,1839,6,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00112685;MQSB=0.941328;RPB=0.16179;SGB=-287.467;VDB=0.34688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3990-S.SNP.10:14628410 chr10:014628410 0 W/14628410-14628410 FN3990-S SNP C -> A AC=1;AN=168;BQB=0.995943;DP=2390;DP4=1224,1080,13,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.55782e-10;MQSB=0.95736;RPB=0.998618;SGB=74.3269;VDB=0.911961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.10:14630025 chr10:014630025 0 W/14630025-14630025 FN3665-S SNP G -> T AC=1;AN=190;BQB=0.874299;DP=2945;DP4=1799,1031,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.19695e-18;MQSB=0.812041;RPB=0.85386;SGB=131.065;VDB=0.396865;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.10:14630026 chr10:014630026 0 W/14630026-14630026 FN3665-S SNP A -> T AC=1;AN=190;BQB=0.85931;DP=2944;DP4=1790,1026,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81969e-17;MQSB=0.82168;RPB=0.973164;SGB=59.414;VDB=0.262993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.10:14637295 chr10:014637295 0 W/14637295-14637295 FN2375 SNP G -> A AC=1;AN=192;BQB=0.161227;DP=4540;DP4=2144,1981,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61808e-08;MQSB=0.993025;RPB=0.112205;SGB=-121.055;VDB=0.961401;EFF=INTERGENIC(MODIFIER||||||||||1) FN-118.SNP.10:14642524 chr10:014642524 0 W/14642524-14642524 FN-118 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g28200 NAD dependent epimerase/dehydratase family protein, putative, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-118.SNP.10:14642536 chr10:014642536 0 W/14642536-14642536 FN-118 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g28200 NAD dependent epimerase/dehydratase family protein, putative, expressed SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN1508-S.SNP.10:14642702 chr10:014642702 0 W/14642702-14642702 FN1508-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os10g28200 NAD dependent epimerase/dehydratase family protein, putative, expressed SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-279.SNP.10:14650975 chr10:014650975 0 W/14650975-14650975 FN-279 Single Base Substitution T-C INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1336-S.SNP.10:14661947 chr10:014661947 0 W/14661947-14661947 FN1336-S Single Base Substitution A-T INTERGENIC HET SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3394-S.SNP.10:14663307 chr10:014663307 0 W/14663307-14663307 FN3394-S SNP G -> A AC=1;AN=184;BQB=0.955475;DP=3776;DP4=1514,2130,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.94261e-10;MQSB=0.934135;RPB=0.999998;SGB=53.3568;VDB=0.735631;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.10:14666507 chr10:014666507 0 W/14666507-14666507 W463-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. W463-2-1.SNP.10:14666508 chr10:014666508 0 W/14666508-14666508 W463-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3494-S.SNP.10:14667282 chr10:014667282 0 W/14667282-14667282 FN3494-S SNP A -> G AC=1;AN=184;BQB=0.999638;DP=2622;DP4=1215,1320,12,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.33421e-14;MQSB=0.971661;RPB=0.972001;SGB=112.047;VDB=0.574319;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.10:14668533 chr10:014668533 0 W/14668533-14668533 FN929-S Single Base Substitution G-T INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2797-S.SNP.10:14683310 chr10:014683310 0 W/14683310-14683310 FN2797-S SNP G -> A AC=2;AN=198;BQB=0.156848;DP=3826;DP4=1946,1641,24,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.62731e-21;MQSB=0.960171;RPB=0.911749;SGB=-46.3576;VDB=0.888929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A641V|1035|LOC_Os10g28240|protein_coding|CODING|LOC_Os10g28240.1|1|1) FN808-S.SNP.10:14685511 chr10:014685511 0 W/14685511-14685511 FN808-S Single Base Substitution A-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN808-S.SNP.10:14685512 chr10:014685512 0 W/14685512-14685512 FN808-S Single Base Substitution A-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3740-S.SNP.10:14702060 chr10:014702060 0 W/14702060-14702060 FN3740-S SNP C -> T AC=2;AN=190;BQB=0.688947;DP=1495;DP4=621,761,5,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30662e-07;MQSB=0.999966;RPB=0.925113;SGB=67.3108;VDB=0.73702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R6W|90|LOC_Os10g28260|protein_coding|CODING|LOC_Os10g28260.1|1|1) FN428-S.SNP.10:14712251 chr10:014712251 0 W/14712251-14712251 FN428-S Single Base Substitution C-G INTRON HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3822-S.SNP.10:14713851 chr10:014713851 0 W/14713851-14713851 FN3822-S SNP A -> T AC=1;AN=190;BQB=0.913992;DP=2620;DP4=1286,1160,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.85802e-07;MQSB=0.999925;RPB=0.958912;SGB=5.66499;VDB=0.159485;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.10:14714085 chr10:014714085 0 W/14714085-14714085 FN4161-S SNP A -> T AC=1;AN=170;BQB=0.942516;DP=1648;DP4=937,651,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.56009e-08;MQSB=0.809087;RPB=0.993099;SGB=41.7633;VDB=0.398222;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.10:14721465 chr10:014721465 0 W/14721465-14721465 FN1180-S Single Base Substitution C-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1180-S.SNP.10:14721468 chr10:014721468 0 W/14721468-14721468 FN1180-S Single Base Substitution A-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1180-S.SNP.10:14721469 chr10:014721469 0 W/14721469-14721469 FN1180-S Single Base Substitution G-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN4070-S.SNP.10:14744501 chr10:014744501 0 W/14744501-14744501 FN4070-S SNP G -> T AC=2;AN=182;BQB=0.954679;DP=2727;DP4=1358,1256,27,29;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.74971e-31;MQSB=0.780285;RPB=0.645009;SGB=241.601;VDB=0.727319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.10:14749416 chr10:014749416 0 W/14749416-14749416 FN2207-S SNP G -> C AC=2;AN=190;BQB=0.421219;DP=4796;DP4=1900,2545,11,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.96772e-10;MQSB=0.89635;RPB=0.0284385;SGB=100.07;VDB=0.211078;EFF=INTRON(MODIFIER||||358|LOC_Os10g28340|protein_coding|CODING|LOC_Os10g28340.1|1|1),INTRON(MODIFIER||||358|LOC_Os10g28340|protein_coding|CODING|LOC_Os10g28340.5|1|1),INTRON(MODIFIER||||258|LOC_Os10g28340|protein_coding|CODING|LOC_Os10g28340.2|1|1),INTRON(MODIFIER||||258|LOC_Os10g28340|protein_coding|CODING|LOC_Os10g28340.3|1|1) FN3777-S.SNP.10:14750346 chr10:014750346 0 W/14750346-14750346 FN3777-S SNP C -> A AC=2;AN=190;BQB=0.988801;DP=2228;DP4=1044,1095,11,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.52371e-10;MQSB=0.107587;RPB=0.396885;SGB=94.6341;VDB=0.354756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:14755863 chr10:014755863 0 W/14755863-14755863 FN2572-S SNP A -> C AC=1;AN=198;BQB=0.228576;DP=4532;DP4=2108,2256,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.54696e-08;MQSB=0.990646;RPB=0.89156;SGB=63.3342;VDB=0.370849;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.10:14756579 chr10:014756579 0 W/14756579-14756579 FN1420-S Single Base Substitution G-A INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1376-S.SNP.10:14762613 chr10:014762613 0 W/14762613-14762613 FN1376-S Single Base Substitution C-T INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN1655-S.SNP.10:14765702 chr10:014765702 0 W/14765702-14765702 FN1655-S Single Base Substitution A-C INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2220-S.SNP.10:14779502 chr10:014779502 0 W/14779502-14779502 FN2220-S SNP T -> A AC=1;AN=190;BQB=0.999216;DP=4007;DP4=1976,1734,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00074869;MQB=1.08927e-06;MQSB=0.688873;RPB=0.999984;SGB=38.983;VDB=0.985604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.10:14788834 chr10:014788834 0 W/14788834-14788834 FN2463 SNP C -> T AC=1;AN=200;BQB=0.00753915;DP=4853;DP4=2613,1973,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24073e-09;MQSB=0.853313;RPB=0.685592;SGB=-35.3156;VDB=0.948252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.10:14798781 chr10:014798781 0 W/14798781-14798781 FN3513-S SNP G -> A AC=2;AN=188;BQB=0.982086;DP=3475;DP4=1437,1957,6,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.711e-15;MQSB=0.972692;RPB=0.998846;SGB=103.498;VDB=0.646346;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A93|383|LOC_Os10g28440|protein_coding|CODING|LOC_Os10g28440.1|3|1) W674-4-1.SNP.10:14801818 chr10:014801818 0 W/14801818-14801818 W674-4-1 Single Base Substitution T-C INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. W416-6-1.SNP.10:14809293 chr10:014809293 0 W/14809293-14809293 W416-6-1 Single Base Substitution G-A INTRON HOMO SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1186-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN1186-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g28470 retrotransposon protein, putative, unclassified, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2440.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN2440 SNP G -> A AC=2;AN=200;BQB=0.63871;DP=5229;DP4=2579,2317,24,16;HOB=0.0198;ICB=0.495051;MQ=30;MQ0F=0.125837;MQB=0.0405175;MQSB=2.82293e-11;RPB=0.999677;SGB=178.604;VDB=0.0774989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN2564-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN2564-S SNP G -> A AC=1;AN=198;BQB=0.314713;DP=4970;DP4=2481,2261,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.139034;MQB=0.828904;MQSB=8.55536e-10;RPB=0.774276;SGB=11.1786;VDB=0.577201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN2648-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.992375;DP=5998;DP4=2926,2766,14,14;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.137212;MQB=0.929302;MQSB=9.60509e-14;RPB=0.121598;SGB=90.7419;VDB=0.172732;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN317-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN317-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g28470 retrotransposon protein, putative, unclassified, expressed SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3306-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN3306-S SNP G -> A AC=1;AN=184;BQB=0.998211;DP=3820;DP4=1712,2024,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0958115;MQB=0.787418;MQSB=0;RPB=0.25944;SGB=75.8731;VDB=0.79174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN3424-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN3424-S SNP G -> A AC=2;AN=184;BQB=0.953843;DP=3946;DP4=1768,2074,20,18;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.099848;MQB=0.859173;MQSB=0;RPB=0.99546;SGB=123.793;VDB=0.892419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN3615-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN3615-S SNP G -> A AC=1;AN=190;BQB=0.932999;DP=2496;DP4=1217,1198,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.116587;MQB=0.848041;MQSB=1.82169e-44;RPB=0.207208;SGB=71.8647;VDB=0.0997383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN4081-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN4081-S SNP G -> A AC=1;AN=182;BQB=0.873199;DP=3606;DP4=1796,1739,16,10;HOB=6.03792e-05;ICB=0.000121422;MQ=31;MQ0F=0.133111;MQB=0.748032;MQSB=0;RPB=0.873504;SGB=81.2689;VDB=0.915172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN4201-S.SNP.10:14813865 chr10:014813865 0 W/14813865-14813865 FN4201-S SNP G -> A AC=2;AN=170;BQB=0.597992;DP=2801;DP4=1383,1341,11,11;HOB=0.0232526;ICB=0.494188;MQ=31;MQ0F=0.124955;MQB=0.476241;MQSB=7.50816e-42;RPB=0.999749;SGB=92.2986;VDB=0.823927;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1210W|1765|LOC_Os10g28470|protein_coding|CODING|LOC_Os10g28470.1|4|1) FN989-S.SNP.10:14830088 chr10:014830088 0 W/14830088-14830088 FN989-S Single Base Substitution G-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN2358.SNP.10:14830564 chr10:014830564 0 W/14830564-14830564 FN2358 SNP T -> C AC=1;AN=192;BQB=0.974377;DP=8376;DP4=5360,2583,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.0429799;MQB=0.181933;MQSB=0;RPB=0.610831;SGB=46.9087;VDB=0.94357;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.10:14832856 chr10:014832856 0 W/14832856-14832856 FN911-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN2254-S.SNP.10:14833031 chr10:014833031 0 W/14833031-14833031 FN2254-S SNP T -> C AC=2;AN=188;BQB=0.574303;DP=4904;DP4=2272,2390,10,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.0071e-10;MQSB=0.000136995;RPB=0.25743;SGB=85.8548;VDB=0.352055;EFF=UTR_3_PRIME(MODIFIER||2158||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.1|5|1),UTR_3_PRIME(MODIFIER||2158||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.2|6|1) FN3557-S.SNP.10:14834614 chr10:014834614 0 W/14834614-14834614 FN3557-S SNP A -> T AC=2;AN=188;BQB=0.999412;DP=2859;DP4=1424,1306,22,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.4766e-20;MQSB=0.95307;RPB=0.99834;SGB=113.937;VDB=0.368447;EFF=UTR_3_PRIME(MODIFIER||575||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.1|5|1),UTR_3_PRIME(MODIFIER||575||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.2|6|1) FN3528-S.SNP.10:14838988 chr10:014838988 0 W/14838988-14838988 FN3528-S SNP A -> G AC=1;AN=188;BQB=0.945958;DP=3150;DP4=1827,1185,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.58841e-10;MQSB=0.991142;RPB=0.970555;SGB=43.0708;VDB=0.462893;EFF=INTRON(MODIFIER||||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.1|1|1),INTRON(MODIFIER||||106|LOC_Os10g28510|protein_coding|CODING|LOC_Os10g28510.2|1|1) FN434-S.SNP.10:14843162 chr10:014843162 0 W/14843162-14843162 FN434-S Single Base Substitution T-G INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN3822-S.SNP.10:14845513 chr10:014845513 0 W/14845513-14845513 FN3822-S SNP A -> G AC=1;AN=190;BQB=0.981547;DP=2893;DP4=1457,1323,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84157e-05;MQSB=0.994097;RPB=0.915177;SGB=21.8853;VDB=0.868432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.10:14860182 chr10:014860182 0 W/14860182-14860182 FN1106-S Single Base Substitution G-A INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN4138-S.SNP.10:14863128 chr10:014863128 0 W/14863128-14863128 FN4138-S SNP C -> T AC=1;AN=170;BQB=0.994435;DP=1526;DP4=770,676,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.0035202;MQSB=0.0435326;RPB=0.447446;SGB=25.6601;VDB=0.519566;EFF=INTERGENIC(MODIFIER||||||||||1) FN3308-S.SNP.10:14866270 chr10:014866270 0 W/14866270-14866270 FN3308-S SNP G -> A AC=2;AN=184;BQB=0.919657;DP=3006;DP4=1411,1465,22,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.35061e-20;MQSB=0.741351;RPB=0.526136;SGB=120.271;VDB=0.273592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.10:14870280 chr10:014870280 0 W/14870280-14870280 FN2375 SNP A -> G AC=1;AN=192;BQB=0.710871;DP=4898;DP4=2589,2058,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.41648e-06;MQSB=0.970324;RPB=0.096218;SGB=16.0922;VDB=0.349734;EFF=UTR_3_PRIME(MODIFIER||681||70|LOC_Os10g28570|protein_coding|CODING|LOC_Os10g28570.1|3|1),INTRON(MODIFIER||||63|LOC_Os10g28570|protein_coding|CODING|LOC_Os10g28570.2|5|1),INTRON(MODIFIER||||71|LOC_Os10g28570|protein_coding|CODING|LOC_Os10g28570.3|4|1) FN3893-S.SNP.10:14873484 chr10:014873484 0 W/14873484-14873484 FN3893-S SNP C -> T AC=2;AN=158;BQB=0.993382;DP=2352;DP4=1076,1178,12,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.8984e-17;MQSB=0.896745;RPB=0.999584;SGB=91.3541;VDB=0.104135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.10:14881841 chr10:014881841 0 W/14881841-14881841 FN2473 SNP T -> C AC=2;AN=200;BQB=0.461184;DP=4749;DP4=2176,2290,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.22732e-18;MQSB=0.971879;RPB=0.678095;SGB=68.5625;VDB=0.0814075;EFF=INTERGENIC(MODIFIER||||||||||1) FN1215-S.SNP.10:14882283 chr10:014882283 0 W/14882283-14882283 FN1215-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1094-S.SNP.10:14883792 chr10:014883792 0 W/14883792-14883792 FN1094-S Single Base Substitution C-A INTERGENIC HOMO SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN846-S.SNP.10:14886219 chr10:014886219 0 W/14886219-14886219 FN846-S Single Base Substitution C-T INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN3767-S.SNP.10:14901942 chr10:014901942 0 W/14901942-14901942 FN3767-S SNP G -> A AC=1;AN=190;BQB=0.835099;DP=2778;DP4=1450,1197,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06987e-05;MQSB=0.999782;RPB=0.651361;SGB=49.0954;VDB=0.321497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.10:14902642 chr10:014902642 0 W/14902642-14902642 FN1121-S Single Base Substitution G-T INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2330.SNP.10:14902920 chr10:014902920 0 W/14902920-14902920 FN2330 SNP C -> T AC=1;AN=192;BQB=0.225585;DP=3883;DP4=2264,1260,18,1;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000515066;MQB=9.05726e-07;MQSB=0.0779999;RPB=0.950429;SGB=81.1609;VDB=0.125565;EFF=INTERGENIC(MODIFIER||||||||||1) FN490-S.SNP.10:14914272 chr10:014914272 0 W/14914272-14914272 FN490-S Single Base Substitution C-T INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. W453-3-1.SNP.10:14915842 chr10:014915842 0 W/14915842-14915842 W453-3-1 Single Base Substitution C-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2202-S.SNP.10:14937026 chr10:014937026 0 W/14937026-14937026 FN2202-S SNP C -> G AC=1;AN=190;BQB=0.837653;DP=5244;DP4=2584,2331,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=21;MQ0F=0.162853;MQB=0.0761347;MQSB=0.478936;RPB=0.990183;SGB=68.0854;VDB=0.862215;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgC|W27C|1421|LOC_Os10g28650|protein_coding|CODING|LOC_Os10g28650.1|1|1) FN-288.SNP.10:14939875 chr10:014939875 0 W/14939875-14939875 FN-288 Single Base Substitution C-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-74.SNP.10:14952411 chr10:014952411 0 W/14952411-14952411 FN-74 Single Base Substitution G-A INTERGENIC HET SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN-154.SNP.10:14953889 chr10:014953889 0 W/14953889-14953889 FN-154 Single Base Substitution C-T INTERGENIC HET SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN569-S.SNP.10:14955429 chr10:014955429 0 W/14955429-14955429 FN569-S Single Base Substitution A-G INTRON HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. W674-4-1.SNP.10:14976684 chr10:014976684 0 W/14976684-14976684 W674-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN865-S.SNP.10:14981912 chr10:014981912 0 W/14981912-14981912 FN865-S Single Base Substitution C-T INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2580-S.SNP.10:14982787 chr10:014982787 0 W/14982787-14982787 FN2580-S SNP G -> T AC=1;AN=198;BQB=0.944686;DP=4028;DP4=1941,1782,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.13558e-09;MQSB=0.894489;RPB=0.919445;SGB=29.3443;VDB=0.639877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.10:14991320 chr10:014991320 0 W/14991320-14991320 FN3502-S SNP C -> A AC=1;AN=188;BQB=0.950957;DP=3860;DP4=1794,1876,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00440415;MQB=2.25855e-08;MQSB=0.194017;RPB=0.912762;SGB=80.782;VDB=0.719255;EFF=INTERGENIC(MODIFIER||||||||||1) FN3465-S.SNP.10:14992891 chr10:014992891 0 W/14992891-14992891 FN3465-S SNP C -> T AC=2;AN=184;BQB=0.822001;DP=2747;DP4=1660,906,40,14;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0185657;MQB=2.10626e-05;MQSB=0;RPB=0.990713;SGB=201.644;VDB=0.796666;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.10:14993358 chr10:014993358 0 W/14993358-14993358 FN1231-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g28724 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN3502-S.SNP.10:14999971 chr10:014999971 0 W/14999971-14999971 FN3502-S SNP T -> A AC=1;AN=188;BQB=0.906098;DP=3142;DP4=1678,1352,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=21;MQ0F=0.288351;MQB=0.501063;MQSB=4.15059e-06;RPB=0.512589;SGB=39.5276;VDB=0.700181;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.10:15005907 chr10:015005907 0 W/15005907-15005907 FN-410 Single Base Substitution G-T INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.10:15005907 chr10:015005907 0 W/15005907-15005907 FN410-S Single Base Substitution G-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN_N1-150-1.SNP.10:15009747 chr10:015009747 0 W/15009747-15009747 FN_N1-150-1 Single Base Substitution C-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN2284.SNP.10:15014765 chr10:015014765 0 W/15014765-15014765 FN2284 SNP T -> A AC=1;AN=192;BQB=0.964496;DP=5230;DP4=2555,2396,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.05477e-14;MQSB=0.372839;RPB=0.207202;SGB=117.676;VDB=0.684939;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.10:15017082 chr10:015017082 0 W/15017082-15017082 FN3717-S SNP C -> T AC=2;AN=190;BQB=0.724709;DP=2629;DP4=1330,1217,3,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.7483e-06;MQSB=0.999899;RPB=0.738903;SGB=28.9929;VDB=0.699883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.10:15019830 chr10:015019830 0 W/15019830-15019830 FN2251-S SNP G -> C AC=2;AN=190;BQB=0.323729;DP=5121;DP4=2356,2474,19,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.22169e-16;MQSB=0.831336;RPB=0.998887;SGB=100.07;VDB=0.602581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1109-S.SNP.10:15024892 chr10:015024892 0 W/15024892-15024892 FN1109-S Single Base Substitution G-A INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN4002-S.SNP.10:15025539 chr10:015025539 0 W/15025539-15025539 FN4002-S SNP C -> G AC=1;AN=168;BQB=0.967482;DP=2832;DP4=1263,1447,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.81753e-08;MQSB=0.976824;RPB=0.976807;SGB=47.7421;VDB=0.906325;EFF=INTERGENIC(MODIFIER||||||||||1) FN2724-S.SNP.10:15026475 chr10:015026475 0 W/15026475-15026475 FN2724-S SNP T -> C AC=2;AN=200;BQB=0.948215;DP=4827;DP4=2218,2183,20,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.91062e-20;MQSB=0.91136;RPB=0.716298;SGB=92.009;VDB=0.899909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M218T|374|LOC_Os10g28820|protein_coding|CODING|LOC_Os10g28820.1|1|1) FN764-S.SNP.10:15033310 chr10:015033310 0 W/15033310-15033310 FN764-S Single Base Substitution C-A INTERGENIC HOMO SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1024-S.SNP.10:15038327 chr10:015038327 0 W/15038327-15038327 FN1024-S Single Base Substitution A-G INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN1561-S.SNP.10:15038340 chr10:015038340 0 W/15038340-15038340 FN1561-S Single Base Substitution A-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-277.SNP.10:15043871 chr10:015043871 0 W/15043871-15043871 FN-277 Single Base Substitution C-T INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3906-S.SNP.10:15053605 chr10:015053605 0 W/15053605-15053605 FN3906-S SNP G -> A AC=1;AN=158;BQB=0.476481;DP=2424;DP4=1108,1239,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.0709571;MQB=0.501022;MQSB=0.000301681;RPB=0.418554;SGB=40.8124;VDB=0.508575;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H666Y|1197|LOC_Os10g28890|protein_coding|CODING|LOC_Os10g28890.1|4|1) FN3500-S.SNP.10:15065122 chr10:015065122 0 W/15065122-15065122 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.910219;DP=3528;DP4=1723,1693,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.0782313;MQB=0.845296;MQSB=1.1626e-05;RPB=0.123573;SGB=16.3413;VDB=0.0514687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.10:15065587 chr10:015065587 0 W/15065587-15065587 FN2354 SNP G -> A AC=1;AN=192;BQB=0.90707;DP=5190;DP4=2737,2095,17,14;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.333333;MQB=0.303075;MQSB=3.94147e-25;RPB=0.629562;SGB=100.374;VDB=0.783156;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.10:15068091 chr10:015068091 0 W/15068091-15068091 FN1538-S Single Base Substitution G-A INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2451.SNP.10:15073727 chr10:015073727 0 W/15073727-15073727 FN2451 SNP C -> G AC=1;AN=200;BQB=0.895529;DP=4568;DP4=2577,1703,4,10;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0915061;MQB=0.547518;MQSB=8.09796e-29;RPB=0.339184;SGB=40.2696;VDB=0.641167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Gtc|L148V|197|LOC_Os10g28920|protein_coding|CODING|LOC_Os10g28920.1|1|1) FN2729-S.SNP.10:15077092 chr10:015077092 0 W/15077092-15077092 FN2729-S SNP C -> A AC=1;AN=200;BQB=0.666121;DP=4693;DP4=2316,2139,9,10;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.217558;MQB=0.912;MQSB=1.4013e-44;RPB=0.961493;SGB=11.0951;VDB=0.650357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H955N|1470|LOC_Os10g28930|protein_coding|CODING|LOC_Os10g28930.1|1|1) FN4150-S.SNP.10:15082773 chr10:015082773 0 W/15082773-15082773 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.984565;DP=3136;DP4=1570,1474,11,21;HOB=6.92042e-05;ICB=0.000139222;MQ=20;MQ0F=0.329082;MQB=0.00207527;MQSB=0.666039;RPB=0.161131;SGB=136.725;VDB=0.256946;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.10:15087542 chr10:015087542 0 W/15087542-15087542 FN485-S Single Base Substitution G-C INTERGENIC HOMO SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN1687-S.SNP.10:15088067 chr10:015088067 0 W/15088067-15088067 FN1687-S SNP G -> T AC=1;AN=188;BQB=0.990459;DP=1430;DP4=630,763,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000564954;MQSB=0.826537;RPB=0.988638;SGB=5.73019;VDB=0.834597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.10:15089248 chr10:015089248 0 W/15089248-15089248 FN2639-S SNP G -> A AC=2;AN=200;BQB=0.111559;DP=4599;DP4=2354,1625,40,28;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.0147858;MQB=4.94082e-06;MQSB=0.000634844;RPB=0.085725;SGB=301.952;VDB=0.209808;EFF=INTRON(MODIFIER||||1074|LOC_Os10g28950|protein_coding|CODING|LOC_Os10g28950.1|1|1) FN-149.SNP.10:15101096 chr10:015101096 0 W/15101096-15101096 FN-149 Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN3830-S.SNP.10:15103539 chr10:015103539 0 W/15103539-15103539 FN3830-S SNP T -> A AC=1;AN=190;BQB=0.781422;DP=2723;DP4=1263,1336,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45902e-14;MQSB=0.980129;RPB=0.774094;SGB=59.414;VDB=0.313043;EFF=UTR_3_PRIME(MODIFIER||24||388|LOC_Os10g28970|protein_coding|CODING|LOC_Os10g28970.2|1|1) FN-250.SNP.10:15106246 chr10:015106246 0 W/15106246-15106246 FN-250 Single Base Substitution C-T INTERGENIC HET SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN2617-S.SNP.10:15109063 chr10:015109063 0 W/15109063-15109063 FN2617-S SNP T -> A AC=1;AN=198;BQB=0.997593;DP=4566;DP4=2446,1876,18,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.45484e-14;MQSB=0.873723;RPB=0.889722;SGB=52.7004;VDB=0.443941;EFF=INTERGENIC(MODIFIER||||||||||1) FN809-S.SNP.10:15110787 chr10:015110787 0 W/15110787-15110787 FN809-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g28990 MBTB42 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2366.SNP.10:15123715 chr10:015123715 0 W/15123715-15123715 FN2366 SNP C -> T AC=1;AN=192;BQB=0.991687;DP=4693;DP4=1863,2542,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000213083;MQB=2.14889e-06;MQSB=0.660599;RPB=0.0286085;SGB=16.0922;VDB=0.0279378;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.10:15130594 chr10:015130594 0 W/15130594-15130594 FN1344-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN972-S.SNP.10:15131196 chr10:015131196 0 W/15131196-15131196 FN972-S Single Base Substitution G-C INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1572-S.SNP.10:15131277 chr10:015131277 0 W/15131277-15131277 FN1572-S Single Base Substitution A-C INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1334-S.SNP.10:15131612 chr10:015131612 0 W/15131612-15131612 FN1334-S Single Base Substitution A-G INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN751-S.SNP.10:15136578 chr10:015136578 0 W/15136578-15136578 FN751-S Single Base Substitution C-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2102-S.SNP.10:15139057 chr10:015139057 0 W/15139057-15139057 FN2102-S SNP C -> T AC=1;AN=168;BQB=0.409592;DP=2456;DP4=1379,1028,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.30797e-08;MQSB=0.900373;RPB=0.968906;SGB=19.7539;VDB=0.167284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T171M|362|LOC_Os10g29050|protein_coding|CODING|LOC_Os10g29050.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T138M|329|LOC_Os10g29050|protein_coding|CODING|LOC_Os10g29050.2|2|1) FN632-S.SNP.10:15142190 chr10:015142190 0 W/15142190-15142190 FN632-S Single Base Substitution C-T SYNONYMOUS_STOP HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN3445-S.SNP.10:15152793 chr10:015152793 0 W/15152793-15152793 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.966626;DP=2613;DP4=1221,1289,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.99708e-08;MQSB=0.416687;RPB=0.522324;SGB=42.7914;VDB=0.303795;EFF=INTRON(MODIFIER||||514|LOC_Os10g29090|protein_coding|CODING|LOC_Os10g29090.1|2|1) FN4075-S.SNP.10:15153284 chr10:015153284 0 W/15153284-15153284 FN4075-S SNP A -> G AC=1;AN=182;BQB=0.927827;DP=2565;DP4=1235,1270,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=41;MQ0F=0.0401559;MQB=0.0622445;MQSB=8.29257e-25;RPB=0.112382;SGB=62.1548;VDB=0.104933;EFF=INTRON(MODIFIER||||514|LOC_Os10g29090|protein_coding|CODING|LOC_Os10g29090.1|2|1) FN1686-S.SNP.10:15157922 chr10:015157922 0 W/15157922-15157922 FN1686-S SNP G -> T AC=1;AN=188;BQB=0.303579;DP=3465;DP4=2085,1334,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.28215e-12;MQSB=0.962844;RPB=0.901671;SGB=-115.921;VDB=0.551553;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.10:15159146 chr10:015159146 0 W/15159146-15159146 FN2412 SNP T -> C AC=1;AN=200;BQB=0.520501;DP=4794;DP4=1989,2499,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.46726e-08;MQSB=0.970219;RPB=0.768283;SGB=54.2646;VDB=0.124002;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.10:15163093 chr10:015163093 0 W/15163093-15163093 FN474-S Single Base Substitution C-T INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN3664-S.SNP.10:15163769 chr10:015163769 0 W/15163769-15163769 FN3664-S SNP A -> G AC=1;AN=190;BQB=0.976522;DP=2948;DP4=1588,1212,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.34949e-13;MQSB=0.996077;RPB=0.240119;SGB=75.1932;VDB=0.418578;EFF=INTERGENIC(MODIFIER||||||||||1) FN731-S.SNP.10:15173895 chr10:015173895 0 W/15173895-15173895 FN731-S Single Base Substitution C-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN3815-S.SNP.10:15175618 chr10:015175618 0 W/15175618-15175618 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.689496;DP=2830;DP4=1234,1451,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47307e-09;MQSB=0.227183;RPB=0.325218;SGB=28.7675;VDB=0.624758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.10:15189448 chr10:015189448 0 W/15189448-15189448 FN1571-S Single Base Substitution T-G INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1571-S.SNP.10:15189449 chr10:015189449 0 W/15189449-15189449 FN1571-S Single Base Substitution A-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN949-S.SNP.10:15198338 chr10:015198338 0 W/15198338-15198338 FN949-S Single Base Substitution T-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN949-S.SNP.10:15198339 chr10:015198339 0 W/15198339-15198339 FN949-S Single Base Substitution T-A INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN-228.SNP.10:15201043 chr10:015201043 0 W/15201043-15201043 FN-228 Single Base Substitution A-G UTR_3_PRIME HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN1573-S.SNP.10:15204224 chr10:015204224 0 W/15204224-15204224 FN1573-S Single Base Substitution C-T INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3964-S.SNP.10:15215664 chr10:015215664 0 W/15215664-15215664 FN3964-S SNP G -> C AC=1;AN=168;BQB=0.929918;DP=2838;DP4=1129,1556,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.51867e-09;MQSB=0.712516;RPB=0.89345;SGB=51.902;VDB=0.104505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.10:15216983 chr10:015216983 0 W/15216983-15216983 FN2617-S SNP G -> A AC=2;AN=198;BQB=0.125395;DP=4280;DP4=1941,2109,26,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.65305e-23;MQSB=0.909048;RPB=0.953876;SGB=137.217;VDB=0.645116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.10:15217677 chr10:015217677 0 W/15217677-15217677 FN1086-S Single Base Substitution A-T INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3511-S.SNP.10:15223538 chr10:015223538 0 W/15223538-15223538 FN3511-S SNP A -> G AC=2;AN=188;BQB=0.834574;DP=2251;DP4=1062,1075,5,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.55845e-09;MQSB=0.768249;RPB=0.760501;SGB=58.0655;VDB=0.763609;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.10:15224599 chr10:015224599 0 W/15224599-15224599 FN3782-S SNP C -> T AC=1;AN=190;BQB=0.873329;DP=3605;DP4=2069,1406,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.23337e-08;MQSB=0.930128;RPB=0.641768;SGB=49.0954;VDB=0.216658;EFF=INTERGENIC(MODIFIER||||||||||1) FN758-S.SNP.10:15226543 chr10:015226543 0 W/15226543-15226543 FN758-S Single Base Substitution A-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN3687-S.SNP.10:15228552 chr10:015228552 0 W/15228552-15228552 FN3687-S SNP T -> A AC=2;AN=190;BQB=0.98372;DP=2698;DP4=1518,950,23,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33628e-17;MQSB=0.989196;RPB=0.76161;SGB=72.1834;VDB=0.264834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V111E|300|LOC_Os10g29260|protein_coding|CODING|LOC_Os10g29260.1|2|1) FN789-S.SNP.10:15230410 chr10:015230410 0 W/15230410-15230410 FN789-S Single Base Substitution G-A INTRON HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN-272.SNP.10:15235987 chr10:015235987 0 W/15235987-15235987 FN-272 Single Base Substitution C-T INTERGENIC HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3947-S.SNP.10:15237617 chr10:015237617 0 W/15237617-15237617 FN3947-S SNP A -> T AC=1;AN=168;BQB=0.870193;DP=3114;DP4=1251,1785,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.144188;MQB=0.911863;MQSB=0;RPB=0.721917;SGB=83.1885;VDB=0.174911;EFF=INTERGENIC(MODIFIER||||||||||1) FN949-S.SNP.10:15239137 chr10:015239137 0 W/15239137-15239137 FN949-S Single Base Substitution A-G INTERGENIC HET SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN3373-S.SNP.10:15239309 chr10:015239309 0 W/15239309-15239309 FN3373-S SNP T -> A AC=1;AN=184;BQB=0.999209;DP=3322;DP4=1500,1692,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00270921;MQB=9.33228e-05;MQSB=1.66066e-06;RPB=0.95036;SGB=53.2642;VDB=0.972498;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.10:15242839 chr10:015242839 0 W/15242839-15242839 FN762-S Single Base Substitution T-G INTERGENIC HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2701-S.SNP.10:15254886 chr10:015254886 0 W/15254886-15254886 FN2701-S SNP A -> G AC=1;AN=200;BQB=0.807146;DP=4997;DP4=2362,2407,4,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.91243e-10;MQSB=0.999514;RPB=0.980415;SGB=32.0901;VDB=0.760738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3964-S.SNP.10:15258442 chr10:015258442 0 W/15258442-15258442 FN3964-S SNP C -> T AC=1;AN=168;BQB=0.416629;DP=2392;DP4=1075,1199,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.13793e-08;MQSB=0.992634;RPB=0.560371;SGB=39.2004;VDB=0.119206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3580-S.SNP.10:15259112 chr10:015259112 0 W/15259112-15259112 FN3580-S SNP A -> T AC=1;AN=188;BQB=0.911569;DP=2717;DP4=1257,1356,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.07996e-09;MQSB=0.855994;RPB=0.983615;SGB=58.0655;VDB=0.839565;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.10:15270847 chr10:015270847 0 W/15270847-15270847 FN1175-S Single Base Substitution A-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3750-S.SNP.10:15274133 chr10:015274133 0 W/15274133-15274133 FN3750-S SNP C -> T AC=1;AN=190;BQB=0.995996;DP=3030;DP4=1500,1430,10,15;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0993399;MQB=0.813471;MQSB=5.93856e-41;RPB=0.156195;SGB=78.7471;VDB=0.27722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.10:15281431 chr10:015281431 0 W/15281431-15281431 FN2124-S SNP C -> T AC=1;AN=168;BQB=0.402201;DP=3259;DP4=1613,1615,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.09539e-11;MQSB=0.968945;RPB=0.984726;SGB=-95.493;VDB=0.29947;EFF=INTERGENIC(MODIFIER||||||||||1) FN3492-S.SNP.10:15296189 chr10:015296189 0 W/15296189-15296189 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.857675;DP=3665;DP4=1193,2272,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0979536;MQB=0.868108;MQSB=1.25167e-38;RPB=0.881648;SGB=44.2207;VDB=0.472394;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.10:15300557 chr10:015300557 0 W/15300557-15300557 FN3535-S SNP A -> T AC=1;AN=188;BQB=0.60985;DP=2900;DP4=1417,1422,7,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000362637;MQSB=0.277832;RPB=0.29337;SGB=30.8063;VDB=0.37366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.10:15303598 chr10:015303598 0 W/15303598-15303598 FN2222-S SNP A -> G AC=2;AN=190;BQB=0.382081;DP=5209;DP4=2661,2177,28,29;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.73463e-31;MQSB=0.94235;RPB=0.249123;SGB=7.82534;VDB=0.731055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2222-S.SNP.10:15307506 chr10:015307506 0 W/15307506-15307506 FN2222-S SNP T -> A AC=2;AN=190;BQB=0.857051;DP=4112;DP4=2377,1478,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.23903e-14;MQSB=0.174919;RPB=0.840383;SGB=49.1985;VDB=0.257219;EFF=INTRON(MODIFIER||||366|LOC_Os10g29470|protein_coding|CODING|LOC_Os10g29470.1|1|1) FN2222-S.SNP.10:15307507 chr10:015307507 0 W/15307507-15307507 FN2222-S SNP T -> A AC=2;AN=190;BQB=0.850694;DP=4135;DP4=2362,1479,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.96079e-14;MQSB=0.1616;RPB=0.995833;SGB=71.6393;VDB=0.333246;EFF=INTRON(MODIFIER||||366|LOC_Os10g29470|protein_coding|CODING|LOC_Os10g29470.1|1|1) FN-136.SNP.10:15308224 chr10:015308224 0 W/15308224-15308224 FN-136 Single Base Substitution A-G INTRON HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2667-S.SNP.10:15317901 chr10:015317901 0 W/15317901-15317901 FN2667-S SNP T -> C AC=1;AN=200;BQB=0.662738;DP=4549;DP4=2266,2044,15,11;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0312157;MQB=0.989116;MQSB=1.04171e-35;RPB=0.980774;SGB=83.5316;VDB=0.581784;EFF=INTRON(MODIFIER||||1829|LOC_Os10g29490|protein_coding|CODING|LOC_Os10g29490.1|2|1) FN431-S.SNP.10:15319786 chr10:015319786 0 W/15319786-15319786 FN431-S Single Base Substitution G-A INTRON HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN1295-S.SNP.10:15320279 chr10:015320279 0 W/15320279-15320279 FN1295-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1634-S.SNP.10:15329998 chr10:015329998 0 W/15329998-15329998 FN1634-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN904-S.SNP.10:15331023 chr10:015331023 0 W/15331023-15331023 FN904-S Single Base Substitution G-A INTRON HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN904-S.SNP.10:15331040 chr10:015331040 0 W/15331040-15331040 FN904-S Single Base Substitution A-T INTRON HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2452.SNP.10:15337863 chr10:015337863 0 W/15337863-15337863 FN2452 SNP T -> G AC=2;AN=200;BQB=0.461004;DP=4730;DP4=2259,2142,22,27;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.000845666;MQB=1.04959e-12;MQSB=0;RPB=0.785854;SGB=112.85;VDB=0.825386;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.10:15340092 chr10:015340092 0 W/15340092-15340092 FN4188-S SNP G -> T AC=1;AN=170;BQB=0.669984;DP=2532;DP4=1281,1177,13,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.58874e-12;MQSB=0.999131;RPB=0.676198;SGB=105.627;VDB=0.687011;EFF=INTRON(MODIFIER||||265|LOC_Os10g29530|protein_coding|CODING|LOC_Os10g29530.1|5|1),INTRON(MODIFIER||||245|LOC_Os10g29530|protein_coding|CODING|LOC_Os10g29530.2|4|1),INTRON(MODIFIER||||175|LOC_Os10g29530|protein_coding|CODING|LOC_Os10g29530.3|2|1) FN402-S.SNP.10:15342146 chr10:015342146 0 W/15342146-15342146 FN402-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN3574-S.SNP.10:15346128 chr10:015346128 0 W/15346128-15346128 FN3574-S SNP A -> G AC=2;AN=188;BQB=0.847492;DP=2712;DP4=1390,1223,21,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.14142e-19;MQSB=0.943836;RPB=0.625192;SGB=117.48;VDB=0.471867;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C487R|839|LOC_Os10g29540|protein_coding|CODING|LOC_Os10g29540.1|4|1) FN319-S.SNP.10:15348121 chr10:015348121 0 W/15348121-15348121 FN319-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g29540 protein kinase domain containing protein, expressed SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN722-S.SNP.10:15348640 chr10:015348640 0 W/15348640-15348640 FN722-S Single Base Substitution T-A INTRON HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN722-S.SNP.10:15348641 chr10:015348641 0 W/15348641-15348641 FN722-S Single Base Substitution C-T INTRON HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN3981-S.SNP.10:15350508 chr10:015350508 0 W/15350508-15350508 FN3981-S SNP T -> C AC=1;AN=168;BQB=0.374581;DP=2144;DP4=994,938,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.3241e-07;MQSB=0.979349;RPB=0.0131806;SGB=-64.9298;VDB=0.330637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T52A|839|LOC_Os10g29540|protein_coding|CODING|LOC_Os10g29540.1|1|1) FN3720-S.SNP.10:15353759 chr10:015353759 0 W/15353759-15353759 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.574557;DP=2897;DP4=1549,1243,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2929e-05;MQSB=0.804623;RPB=0.999261;SGB=36.1006;VDB=0.723337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-315.SNP.10:15363767 chr10:015363767 0 W/15363767-15363767 FN-315 Single Base Substitution G-T STOP_GAINED HOMO LOC_Os10g29560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN-315.SNP.10:15363768 chr10:015363768 0 W/15363768-15363768 FN-315 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g29560 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN3375-S.SNP.10:15367154 chr10:015367154 0 W/15367154-15367154 FN3375-S SNP C -> A AC=1;AN=184;BQB=0.88138;DP=2776;DP4=1347,1321,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.43374e-08;MQSB=0.99827;RPB=0.821723;SGB=48.7425;VDB=0.168008;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A677E|916|LOC_Os10g29560|protein_coding|CODING|LOC_Os10g29560.1|14|1) FN2310.SNP.10:15374369 chr10:015374369 0 W/15374369-15374369 FN2310 SNP G -> A AC=1;AN=192;BQB=0.906942;DP=4510;DP4=2108,2127,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.67283e-14;MQSB=0.99981;RPB=0.998163;SGB=86.1165;VDB=0.00549708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.10:15375407 chr10:015375407 0 W/15375407-15375407 FN1073-S Single Base Substitution T-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2192-S.SNP.10:15375525 chr10:015375525 0 W/15375525-15375525 FN2192-S SNP C -> A AC=1;AN=190;BQB=0.859251;DP=2971;DP4=1656,842,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000673174;MQB=4.03867e-05;MQSB=9.58649e-05;RPB=0.560167;SGB=13.4442;VDB=0.0588422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.10:15378908 chr10:015378908 0 W/15378908-15378908 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.717867;DP=5184;DP4=2744,2140,10,15;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.119406;MQB=0.455183;MQSB=0;RPB=0.991828;SGB=109.527;VDB=0.367662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.10:15378909 chr10:015378909 0 W/15378909-15378909 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.980048;DP=5185;DP4=2815,2074,10,15;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.121311;MQB=0.532391;MQSB=0;RPB=0.998952;SGB=109.527;VDB=0.385392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.10:15379675 chr10:015379675 0 W/15379675-15379675 FN2711-S SNP G -> T AC=1;AN=200;BQB=0.820238;DP=6947;DP4=2786,3788,11,10;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.271772;MQB=0.0591891;MQSB=0;RPB=0.801222;SGB=65.5058;VDB=0.125851;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.10:15381366 chr10:015381366 0 W/15381366-15381366 FN745-S Single Base Substitution G-T INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN351-S.SNP.10:15386361 chr10:015386361 0 W/15386361-15386361 FN351-S Single Base Substitution T-G INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN-78.SNP.10:15386550 chr10:015386550 0 W/15386550-15386550 FN-78 Single Base Substitution G-A INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3956-S.SNP.10:15395234 chr10:015395234 0 W/15395234-15395234 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.951154;DP=2262;DP4=974,1194,3,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.66498e-05;MQSB=0.820077;RPB=0.926326;SGB=25.5891;VDB=0.0520917;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.10:15398012 chr10:015398012 0 W/15398012-15398012 FN1152-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1669-S.SNP.10:15398045 chr10:015398045 0 W/15398045-15398045 FN1669-S SNP G -> A AC=2;AN=188;BQB=0.556576;DP=1586;DP4=781,775,8,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.4461e-08;MQSB=0.99999;RPB=0.752015;SGB=13.2547;VDB=0.20048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.10:15401101 chr10:015401101 0 W/15401101-15401101 FN-53 Single Base Substitution A-T INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN3591-S.SNP.10:15409750 chr10:015409750 0 W/15409750-15409750 FN3591-S SNP T -> C AC=1;AN=188;BQB=0.959894;DP=2653;DP4=1314,1257,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.27425e-10;MQSB=0.996322;RPB=0.891044;SGB=62.6088;VDB=0.556976;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.10:15414384 chr10:015414384 0 W/15414384-15414384 FN-180 Single Base Substitution T-G INTRON HOMO SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. W23-2-1.SNP.10:15419707 chr10:015419707 0 W/15419707-15419707 W23-2-1 Single Base Substitution C-T INTRON HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN808-S.SNP.10:15423970 chr10:015423970 0 W/15423970-15423970 FN808-S Single Base Substitution G-C INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN3050-S.SNP.10:15424154 chr10:015424154 0 W/15424154-15424154 FN3050-S SNP G -> A AC=1;AN=184;BQB=0.856791;DP=2549;DP4=1314,1140,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.99313e-06;MQSB=0.993847;RPB=0.668948;SGB=28.7043;VDB=0.89429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.10:15427780 chr10:015427780 0 W/15427780-15427780 FN2489 SNP T -> C AC=1;AN=200;BQB=0.948228;DP=4663;DP4=2315,1934,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19627e-12;MQSB=0.300839;RPB=0.402942;SGB=69.1109;VDB=0.212994;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.10:15429260 chr10:015429260 0 W/15429260-15429260 FN404-S Single Base Substitution T-C INTRON HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN230-S.SNP.10:15429347 chr10:015429347 0 W/15429347-15429347 FN230-S Single Base Substitution T-C INTRON HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN-155.SNP.10:15435093 chr10:015435093 0 W/15435093-15435093 FN-155 Single Base Substitution G-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN1456-S.SNP.10:15438224 chr10:015438224 0 W/15438224-15438224 FN1456-S Single Base Substitution G-T INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN1121-S.SNP.10:15445853 chr10:015445853 0 W/15445853-15445853 FN1121-S Single Base Substitution T-C INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1643-S.SNP.10:15446396 chr10:015446396 0 W/15446396-15446396 FN1643-S Single Base Substitution T-C INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN-238.SNP.10:15446881 chr10:015446881 0 W/15446881-15446881 FN-238 Single Base Substitution G-T INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-238.SNP.10:15446882 chr10:015446882 0 W/15446882-15446882 FN-238 Single Base Substitution A-T INTERGENIC HET SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN419-S.SNP.10:15454953 chr10:015454953 0 W/15454953-15454953 FN419-S Single Base Substitution C-T INTRON HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN1622-S.SNP.10:15455237 chr10:015455237 0 W/15455237-15455237 FN1622-S Single Base Substitution A-G INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1461-S.SNP.10:15463915 chr10:015463915 0 W/15463915-15463915 FN1461-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2385.SNP.10:15466785 chr10:015466785 0 W/15466785-15466785 FN2385 SNP C -> T AC=2;AN=192;BQB=0.969666;DP=5275;DP4=2475,2414,31,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.84135e-29;MQSB=0.999992;RPB=0.963228;SGB=77.7505;VDB=0.691437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.10:15467692 chr10:015467692 0 W/15467692-15467692 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.792182;DP=2837;DP4=1482,1290,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.75991e-05;MQSB=0.698421;RPB=0.778637;SGB=28.8977;VDB=0.775348;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T122I|366|LOC_Os10g29750|protein_coding|CODING|LOC_Os10g29750.1|1|1) FN-164.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN-164 Single Base Substitution C-G INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-231.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN-231 Single Base Substitution C-G INTERGENIC HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-243.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN-243 Single Base Substitution C-G INTERGENIC HOMO SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN1270-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN1270-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1559-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN1559-S Single Base Substitution C-G INTERGENIC Homo SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN2141-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN2141-S SNP C -> G AC=2;AN=168;BQB=0.72701;DP=1627;DP4=583,969,13,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.21425e-14;MQSB=0.531069;RPB=0.7898;SGB=79.3486;VDB=0.165665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN2342 SNP C -> G AC=2;AN=192;BQB=0.150915;DP=4265;DP4=1765,2257,14,14;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.76502e-14;MQSB=6.17506e-05;RPB=0.480841;SGB=122.24;VDB=0.0518218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN3567-S SNP C -> G AC=2;AN=188;BQB=0.718035;DP=3041;DP4=1553,1378,17,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.59953e-22;MQSB=0.993609;RPB=0.956394;SGB=117.48;VDB=0.128885;EFF=INTERGENIC(MODIFIER||||||||||1) FN434-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN434-S Single Base Substitution C-G INTERGENIC HOMO SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN460-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN460-S Single Base Substitution C-G INTERGENIC HOMO SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN507-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN507-S Single Base Substitution C-G INTERGENIC HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN724-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN724-S Single Base Substitution C-G INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN873-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN873-S Single Base Substitution C-G INTERGENIC HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN932-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN932-S Single Base Substitution C-G INTERGENIC HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN961-S.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 FN961-S Single Base Substitution C-G INTERGENIC HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. W706-3-1.SNP.10:15468601 chr10:015468601 0 W/15468601-15468601 W706-3-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2126-S.SNP.10:15469855 chr10:015469855 0 W/15469855-15469855 FN2126-S SNP A -> T AC=1;AN=168;BQB=0.427717;DP=3722;DP4=1593,2078,17,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.88617e-15;MQSB=0.995462;RPB=0.86726;SGB=-128.892;VDB=0.978638;EFF=INTERGENIC(MODIFIER||||||||||1) FN-241.SNP.10:15475735 chr10:015475735 0 W/15475735-15475735 FN-241 Single Base Substitution G-A INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN-294.SNP.10:15479332 chr10:015479332 0 W/15479332-15479332 FN-294 Single Base Substitution C-G INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN-225.SNP.10:15484146 chr10:015484146 0 W/15484146-15484146 FN-225 Single Base Substitution C-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN4122-S.SNP.10:15484755 chr10:015484755 0 W/15484755-15484755 FN4122-S SNP A -> G AC=1;AN=182;BQB=0.957;DP=2591;DP4=1159,1346,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.59769e-05;MQSB=0.961461;RPB=0.678114;SGB=30.5793;VDB=0.630851;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.10:15485623 chr10:015485623 0 W/15485623-15485623 FN1582-S Single Base Substitution A-G INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3713-S.SNP.10:15498545 chr10:015498545 0 W/15498545-15498545 FN3713-S SNP C -> T AC=2;AN=190;BQB=0.980396;DP=3080;DP4=1529,1401,14,15;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0.0126623;MQB=0.999319;MQSB=0.749627;RPB=0.845433;SGB=92.9626;VDB=0.53709;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T257|397|LOC_Os10g29810|protein_coding|CODING|LOC_Os10g29810.1|1|1) FN3782-S.SNP.10:15498865 chr10:015498865 0 W/15498865-15498865 FN3782-S SNP C -> T AC=2;AN=190;BQB=0.952298;DP=3123;DP4=1363,1645,10,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47638e-14;MQSB=0.10164;RPB=0.840895;SGB=121.957;VDB=0.75802;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V151I|397|LOC_Os10g29810|protein_coding|CODING|LOC_Os10g29810.1|1|1) FN1108-S.SNP.10:15500137 chr10:015500137 0 W/15500137-15500137 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN4001-S.SNP.10:15505961 chr10:015505961 0 W/15505961-15505961 FN4001-S SNP T -> A AC=1;AN=168;BQB=0.929564;DP=2626;DP4=1336,1153,9,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.85307e-07;MQSB=0.995484;RPB=0.0646005;SGB=43.3113;VDB=0.741616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.10:15506178 chr10:015506178 0 W/15506178-15506178 FN3105-S SNP T -> A AC=2;AN=184;BQB=0.941466;DP=2964;DP4=1486,1369,16,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000337382;MQB=7.52205e-15;MQSB=0.9987;RPB=0.853907;SGB=20.4984;VDB=0.4234;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.10:15509875 chr10:015509875 0 W/15509875-15509875 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.983059;DP=2333;DP4=1048,1228,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.54333e-06;MQSB=0.94965;RPB=0.987862;SGB=38.987;VDB=0.996352;EFF=INTERGENIC(MODIFIER||||||||||1) FN1315-S.SNP.10:15510893 chr10:015510893 0 W/15510893-15510893 FN1315-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. W450-6-1.SNP.10:15511575 chr10:015511575 0 W/15511575-15511575 W450-6-1 Single Base Substitution T-C INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3373-S.SNP.10:15516961 chr10:015516961 0 W/15516961-15516961 FN3373-S SNP T -> G AC=1;AN=184;BQB=0.989852;DP=2612;DP4=1292,1230,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.81351e-09;MQSB=0.536093;RPB=0.505302;SGB=42.7914;VDB=0.294671;EFF=SPLICE_SITE_REGION(LOW||||355|LOC_Os10g29850|protein_coding|CODING|LOC_Os10g29850.1|2|1),UTR_5_PRIME(MODIFIER||1074||355|LOC_Os10g29850|protein_coding|CODING|LOC_Os10g29850.1|2|1) FN2229-S.SNP.10:15534563 chr10:015534563 0 W/15534563-15534563 FN2229-S SNP C -> T AC=1;AN=190;BQB=0.275591;DP=4874;DP4=2412,2073,15,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020517;MQB=6.56594e-11;MQSB=0.283028;RPB=0.724791;SGB=-114.309;VDB=0.344699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.10:15536990 chr10:015536990 0 W/15536990-15536990 FN2721-S SNP A -> T AC=1;AN=200;BQB=0.996972;DP=4801;DP4=2088,2156,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.32526e-08;MQSB=0.623782;RPB=0.999058;SGB=33.0593;VDB=0.756558;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.10:15539385 chr10:015539385 0 W/15539385-15539385 FN4142-S SNP C -> T AC=1;AN=170;BQB=0.945696;DP=2641;DP4=1377,1214,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.74714e-07;MQSB=0.0318012;RPB=0.555857;SGB=47.8722;VDB=0.42044;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E326K|371|LOC_Os10g29920|protein_coding|CODING|LOC_Os10g29920.1|2|1) W596-1-1.SNP.10:15544507 chr10:015544507 0 W/15544507-15544507 W596-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN2660-S.SNP.10:15545024 chr10:015545024 0 W/15545024-15545024 FN2660-S SNP A -> G AC=1;AN=200;BQB=0.0141175;DP=4397;DP4=1842,2019,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60831e-13;MQSB=0.992692;RPB=0.502214;SGB=45.1159;VDB=0.0327004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V61A|94|LOC_Os10g29940|protein_coding|CODING|LOC_Os10g29940.1|1|1) FN2559-S.SNP.10:15552400 chr10:015552400 0 W/15552400-15552400 FN2559-S SNP C -> A AC=1;AN=198;BQB=0.411357;DP=4288;DP4=2092,2016,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00489739;MQB=0.00821584;MQSB=0.00731156;RPB=0.355696;SGB=58.7391;VDB=0.631878;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.10:15555690 chr10:015555690 0 W/15555690-15555690 FN3721-S SNP C -> T AC=1;AN=190;BQB=0.935638;DP=2726;DP4=1385,1230,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.0487894;MQB=0.567111;MQSB=1.38736e-18;RPB=0.78605;SGB=67.3108;VDB=0.849155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A272T|1297|LOC_Os10g29970|protein_coding|CODING|LOC_Os10g29970.1|1|1) FN3283-S.SNP.10:15559160 chr10:015559160 0 W/15559160-15559160 FN3283-S SNP A -> C AC=1;AN=184;BQB=0.90053;DP=4148;DP4=2323,1579,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.275072;MQB=0.590409;MQSB=0;RPB=0.976596;SGB=57.786;VDB=0.768163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.10:15560277 chr10:015560277 0 W/15560277-15560277 FN1035-S Single Base Substitution C-T INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3434-S.SNP.10:15567728 chr10:015567728 0 W/15567728-15567728 FN3434-S SNP T -> G AC=2;AN=184;BQB=0.675763;DP=2796;DP4=1178,1436,14,20;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.00751073;MQB=2.46761e-09;MQSB=5.55725e-14;RPB=0.0496554;SGB=148.222;VDB=0.520901;EFF=INTERGENIC(MODIFIER||||||||||1) FN2299.SNP.10:15569016 chr10:015569016 0 W/15569016-15569016 FN2299 SNP C -> A AC=1;AN=192;BQB=0.437586;DP=5991;DP4=2962,2679,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0380571;MQB=0.996184;MQSB=0;RPB=0.998751;SGB=2.66176;VDB=0.252077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.10:15572470 chr10:015572470 0 W/15572470-15572470 FN3375-S SNP A -> G AC=1;AN=184;BQB=0.888839;DP=3104;DP4=1233,1765,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.81618e-10;MQSB=0.999028;RPB=0.608739;SGB=49.835;VDB=0.00177166;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aga/Gga|R346G|476|LOC_Os10g30000|protein_coding|CODING|LOC_Os10g30000.1|3|1) 707-2.SNP.10:15573554 chr10:015573554 0 W/15573554-15573554 707-2 Single Base Substitution C-T INTERGENIC Homo SNo: 1470, Mutant_ID: 707-2, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. FN3434-S.SNP.10:15574092 chr10:015574092 0 W/15574092-15574092 FN3434-S SNP C -> A AC=2;AN=184;BQB=0.734618;DP=2965;DP4=1741,1130,19,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.12429e-17;MQSB=0.987523;RPB=0.6303;SGB=125.613;VDB=0.166646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.10:15574093 chr10:015574093 0 W/15574093-15574093 FN3434-S SNP G -> A AC=2;AN=184;BQB=0.895485;DP=2964;DP4=1709,1119,20,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.85704e-18;MQSB=0.999288;RPB=0.887165;SGB=130.135;VDB=0.167069;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.10:15576278 chr10:015576278 0 W/15576278-15576278 FN3815-S SNP A -> C AC=1;AN=190;BQB=0.701112;DP=3497;DP4=1717,1601,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77328e-06;MQSB=0.935704;RPB=0.876789;SGB=-15.9914;VDB=0.179976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Cgc|S17R|665|LOC_Os10g30010|protein_coding|CODING|LOC_Os10g30010.1|1|1) FN3815-S.SNP.10:15576279 chr10:015576279 0 W/15576279-15576279 FN3815-S SNP G -> A AC=1;AN=190;BQB=0.976921;DP=3502;DP4=1766,1598,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.19829e-06;MQSB=0.957903;RPB=0.561633;SGB=35.4339;VDB=0.0647638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S17N|665|LOC_Os10g30010|protein_coding|CODING|LOC_Os10g30010.1|1|1) FN3824-S.SNP.10:15578985 chr10:015578985 0 W/15578985-15578985 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.883455;DP=3229;DP4=1522,1573,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.76837e-06;MQSB=0.922108;RPB=0.606796;SGB=35.4339;VDB=0.272032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1396-S.SNP.10:15582704 chr10:015582704 0 W/15582704-15582704 FN1396-S Single Base Substitution A-G INTRON HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1533-S.SNP.10:15587033 chr10:015587033 0 W/15587033-15587033 FN1533-S Single Base Substitution C-T INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN2602-S.SNP.10:15594276 chr10:015594276 0 W/15594276-15594276 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.972152;DP=4250;DP4=2186,1911,6,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.43546e-11;MQSB=0.997527;RPB=0.373212;SGB=7.75428;VDB=0.977643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.10:15597715 chr10:015597715 0 W/15597715-15597715 FN3558-S SNP A -> G AC=1;AN=188;BQB=0.991719;DP=2679;DP4=1332,1276,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.85869e-08;MQSB=0.830585;RPB=0.970811;SGB=35.9843;VDB=0.359369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2383.SNP.10:15600127 chr10:015600127 0 W/15600127-15600127 FN2383 SNP G -> A AC=1;AN=192;BQB=0.990933;DP=4988;DP4=2640,2057,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.82893e-10;MQSB=0.782461;RPB=0.502441;SGB=31.4783;VDB=0.355525;EFF=INTERGENIC(MODIFIER||||||||||1) FN1582-S.SNP.10:15607017 chr10:015607017 0 W/15607017-15607017 FN1582-S Single Base Substitution C-T INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN921-S.SNP.10:15616103 chr10:015616103 0 W/15616103-15616103 FN921-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN1310-S.SNP.10:15620005 chr10:015620005 0 W/15620005-15620005 FN1310-S Single Base Substitution T-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN1401-S.SNP.10:15622797 chr10:015622797 0 W/15622797-15622797 FN1401-S Single Base Substitution C-T INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1339-S.SNP.10:15629491 chr10:015629491 0 W/15629491-15629491 FN1339-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN-375.SNP.10:15650359 chr10:015650359 0 W/15650359-15650359 FN-375 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g30130 retrotransposon protein, putative, unclassified, expressed SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3829-S.SNP.10:15662966 chr10:015662966 0 W/15662966-15662966 FN3829-S SNP G -> A AC=1;AN=190;BQB=0.912443;DP=2243;DP4=889,1255,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.1912e-10;MQSB=0.845747;RPB=0.892823;SGB=67.3108;VDB=0.10895;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.10:15664255 chr10:015664255 0 W/15664255-15664255 FN909-S Single Base Substitution T-C INTRON HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN1505-S.SNP.10:15668350 chr10:015668350 0 W/15668350-15668350 FN1505-S Single Base Substitution A-T INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3502-S.SNP.10:15686622 chr10:015686622 0 W/15686622-15686622 FN3502-S SNP T -> C AC=1;AN=188;BQB=0.89703;DP=3928;DP4=2143,1654,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.15308e-11;MQSB=0.975212;RPB=0.959169;SGB=67.8739;VDB=0.52706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-304.SNP.10:15687337 chr10:015687337 0 W/15687337-15687337 FN-304 Single Base Substitution G-A INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN561-S.SNP.10:15688985 chr10:015688985 0 W/15688985-15688985 FN561-S Single Base Substitution A-G INTRON HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN561-S.SNP.10:15688986 chr10:015688986 0 W/15688986-15688986 FN561-S Single Base Substitution G-T INTRON HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN561-S.SNP.10:15688987 chr10:015688987 0 W/15688987-15688987 FN561-S Single Base Substitution G-A INTRON HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. W42-1-3S-1.SNP.10:15694273 chr10:015694273 0 W/15694273-15694273 W42-1-3S-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN-119.SNP.10:15710554 chr10:015710554 0 W/15710554-15710554 FN-119 Single Base Substitution A-T INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN4188-S.SNP.10:15721488 chr10:015721488 0 W/15721488-15721488 FN4188-S SNP G -> A AC=1;AN=170;BQB=0.851488;DP=2126;DP4=1042,1022,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=21;MQ0F=0.190499;MQB=0.945959;MQSB=0.0006361;RPB=0.990708;SGB=74.528;VDB=0.629029;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T598I|2026|LOC_Os10g30260|protein_coding|CODING|LOC_Os10g30260.1|1|1) FN2797-S.SNP.10:15721673 chr10:015721673 0 W/15721673-15721673 FN2797-S SNP G -> T AC=2;AN=186;BQB=0.730211;DP=2944;DP4=1360,1416,17,26;HOB=0.0212741;ICB=0.494682;MQ=31;MQ0F=0.0628397;MQB=0.424328;MQSB=0;RPB=0.972186;SGB=134.417;VDB=0.891854;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D536E|2026|LOC_Os10g30260|protein_coding|CODING|LOC_Os10g30260.1|1|1) FN3416-S.SNP.10:15722250 chr10:015722250 0 W/15722250-15722250 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.913415;DP=4666;DP4=2318,2254,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.202315;MQB=0.0268646;MQSB=1.23312e-09;RPB=0.572118;SGB=66.8296;VDB=0.884131;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R344H|2026|LOC_Os10g30260|protein_coding|CODING|LOC_Os10g30260.1|1|1) FN_769-4-1.SNP.10:15723341 chr10:015723341 0 W/15723341-15723341 FN_769-4-1 Single Base Substitution C-T Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN320-S.SNP.10:15725846 chr10:015725846 0 W/15725846-15725846 FN320-S Single Base Substitution G-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN701-S.SNP.10:15725851 chr10:015725851 0 W/15725851-15725851 FN701-S Single Base Substitution C-T INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3950-S.SNP.10:15729528 chr10:015729528 0 W/15729528-15729528 FN3950-S SNP G -> C AC=1;AN=168;BQB=0.833383;DP=2782;DP4=1131,1511,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000359454;MQB=2.55672e-13;MQSB=0.61646;RPB=0.610164;SGB=72.4869;VDB=0.688692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.10:15730540 chr10:015730540 0 W/15730540-15730540 FN2751-S SNP T -> A AC=1;AN=200;BQB=0.0878252;DP=4818;DP4=1884,2435,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50827e-09;MQSB=0.993157;RPB=0.606608;SGB=-83.3055;VDB=0.477905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.10:15730673 chr10:015730673 0 W/15730673-15730673 FN1209-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1239-S.SNP.10:15736430 chr10:015736430 0 W/15736430-15736430 FN1239-S Single Base Substitution C-T INTRON HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN912-S.SNP.10:15755838 chr10:015755838 0 W/15755838-15755838 FN912-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN-112.SNP.10:15761109 chr10:015761109 0 W/15761109-15761109 FN-112 Single Base Substitution G-T INTERGENIC HET SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN1727-S.SNP.10:15761109 chr10:015761109 0 W/15761109-15761109 FN1727-S SNP G -> T AC=2;AN=188;BQB=0.999628;DP=4006;DP4=2135,1827,20,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.62556e-18;MQSB=0.00104275;RPB=0.895439;SGB=113.937;VDB=0.578735;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.10:15761109 chr10:015761109 0 W/15761109-15761109 FN4024-S SNP G -> T AC=1;AN=168;BQB=0.992368;DP=2392;DP4=1279,1027,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.34083e-06;MQSB=0.984599;RPB=0.985811;SGB=52.1728;VDB=0.83439;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.10:15761109 chr10:015761109 0 W/15761109-15761109 FN_935-1 Single Base Substitution G-T Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN337-S.SNP.10:15761259 chr10:015761259 0 W/15761259-15761259 FN337-S Single Base Substitution A-G INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN-212.SNP.10:15761278 chr10:015761278 0 W/15761278-15761278 FN-212 Single Base Substitution G-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN4145-S.SNP.10:15762365 chr10:015762365 0 W/15762365-15762365 FN4145-S SNP C -> A AC=1;AN=170;BQB=0.940589;DP=2662;DP4=1282,1279,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.26547e-06;MQSB=0.991149;RPB=0.290079;SGB=38.987;VDB=0.285391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3471-S.SNP.10:15772533 chr10:015772533 0 W/15772533-15772533 FN3471-S SNP C -> A AC=2;AN=184;BQB=0.609898;DP=3498;DP4=1800,1490,25,13;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00428816;MQB=2.04888e-10;MQSB=0.000248092;RPB=0.43903;SGB=123.793;VDB=0.178232;EFF=INTRON(MODIFIER||||342|LOC_Os10g30350|protein_coding|CODING|LOC_Os10g30350.1|1|1) FN-182.SNP.10:15774479 chr10:015774479 0 W/15774479-15774479 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2137-S.SNP.10:15776797 chr10:015776797 0 W/15776797-15776797 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.924158;DP=1551;DP4=747,730,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.93713e-07;MQSB=0.849938;RPB=0.922796;SGB=10.0307;VDB=0.0735697;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.10:15783638 chr10:015783638 0 W/15783638-15783638 FN-329 Single Base Substitution C-T INTRON HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-329.SNP.10:15783639 chr10:015783639 0 W/15783639-15783639 FN-329 Single Base Substitution G-A INTRON HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2483.SNP.10:15789543 chr10:015789543 0 W/15789543-15789543 FN2483 SNP T -> C AC=1;AN=200;BQB=0.331601;DP=4132;DP4=1687,2239,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34034e-07;MQSB=0.435525;RPB=0.819479;SGB=45.0543;VDB=0.423272;EFF=INTERGENIC(MODIFIER||||||||||1) FN671-S.SNP.10:15791639 chr10:015791639 0 W/15791639-15791639 FN671-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g30380 cytochrome P450, putative, expressed SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN671-S.SNP.10:15791640 chr10:015791640 0 W/15791640-15791640 FN671-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN2704-S.SNP.10:15795952 chr10:015795952 0 W/15795952-15795952 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.969576;DP=5379;DP4=2348,2692,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.17512e-14;MQSB=0.727261;RPB=0.599658;SGB=50.3263;VDB=0.652403;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.10:15803013 chr10:015803013 0 W/15803013-15803013 FN3305-S SNP A -> G AC=2;AN=184;BQB=0.772251;DP=2706;DP4=1295,1248,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.39739e-17;MQSB=0.983732;RPB=0.777589;SGB=22.0202;VDB=0.582304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3305-S.SNP.10:15803015 chr10:015803015 0 W/15803015-15803015 FN3305-S SNP G -> T AC=2;AN=184;BQB=0.999827;DP=2714;DP4=1280,1328,15,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19317e-15;MQSB=0.999449;RPB=0.906776;SGB=103.004;VDB=0.284843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.10:15807017 chr10:015807017 0 W/15807017-15807017 FN3490-S SNP T -> C AC=2;AN=184;BQB=0.177905;DP=2635;DP4=1218,1253,18,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.81179e-20;MQSB=0.999423;RPB=0.818971;SGB=-46.751;VDB=0.571481;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A495|519|LOC_Os10g30410|protein_coding|CODING|LOC_Os10g30410.1|2|1) FN3490-S.SNP.10:15807026 chr10:015807026 0 W/15807026-15807026 FN3490-S SNP C -> A AC=2;AN=184;BQB=0.979671;DP=2680;DP4=1248,1317,12,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.88136e-22;MQSB=0.999796;RPB=0.822259;SGB=148.222;VDB=0.530544;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M492I|519|LOC_Os10g30410|protein_coding|CODING|LOC_Os10g30410.1|2|1) FN-128.SNP.10:15808108 chr10:015808108 0 W/15808108-15808108 FN-128 Single Base Substitution A-T INTRON HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN-174.SNP.10:15809183 chr10:015809183 0 W/15809183-15809183 FN-174 Single Base Substitution A-G INTRON HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3842-S.SNP.10:15820189 chr10:015820189 0 W/15820189-15820189 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.999583;DP=2643;DP4=1199,1357,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3252e-06;MQSB=0.987527;RPB=0.923247;SGB=25.439;VDB=0.684511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.10:15822787 chr10:015822787 0 W/15822787-15822787 FN2318 SNP A -> G AC=1;AN=192;BQB=0.567157;DP=5038;DP4=2371,2285,14,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.30837e-18;MQSB=0.888141;RPB=0.495048;SGB=72.5078;VDB=0.800578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.10:15824033 chr10:015824033 0 W/15824033-15824033 FN1121-S Single Base Substitution A-T INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-160.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN-160 Single Base Substitution T-A INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN-380.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN-380 Single Base Substitution T-A INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1522-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN1522-S Single Base Substitution T-A INTERGENIC Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1525-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN1525-S Single Base Substitution T-A INTERGENIC Homo SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2377.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN2377 SNP T -> A AC=2;AN=192;BQB=0.258638;DP=5070;DP4=2584,2174,38,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.24952e-38;MQSB=0.856311;RPB=0.89532;SGB=175.082;VDB=0.0881453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3374-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN3374-S SNP T -> A AC=2;AN=184;BQB=0.999999;DP=3194;DP4=1594,1439,32,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.65069e-28;MQSB=0.982812;RPB=0.926234;SGB=138.653;VDB=0.294852;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN3489-S SNP T -> A AC=1;AN=184;BQB=0.995462;DP=2946;DP4=1503,1358,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.47351e-07;MQSB=0.999913;RPB=0.998566;SGB=57.786;VDB=0.338877;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN3559-S SNP T -> A AC=1;AN=188;BQB=0.999457;DP=2988;DP4=1551,1358,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65713e-10;MQSB=0.902516;RPB=0.142381;SGB=50.1574;VDB=0.12453;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN3824-S SNP T -> A AC=2;AN=190;BQB=0.930664;DP=2817;DP4=1517,1214,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.63137e-09;MQSB=0.993116;RPB=0.998978;SGB=57.4238;VDB=0.657466;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.999344;DP=2528;DP4=1306,1147,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.71159e-09;MQSB=0.931391;RPB=0.861086;SGB=45.206;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN889-S Single Base Substitution T-A INTERGENIC HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN_N1-119-1.SNP.10:15824395 chr10:015824395 0 W/15824395-15824395 FN_N1-119-1 Single Base Substitution T-A Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN-54.SNP.10:15829418 chr10:015829418 0 W/15829418-15829418 FN-54 Single Base Substitution T-C INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN833-S.SNP.10:15832131 chr10:015832131 0 W/15832131-15832131 FN833-S Single Base Substitution G-A INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN943-S.SNP.10:15838413 chr10:015838413 0 W/15838413-15838413 FN943-S Single Base Substitution G-A INTERGENIC HET SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN2230-S.SNP.10:15845599 chr10:015845599 0 W/15845599-15845599 FN2230-S SNP T -> G AC=1;AN=190;BQB=0.978729;DP=4955;DP4=2342,1913,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78347e-16;MQSB=0.334596;RPB=0.582644;SGB=25.8654;VDB=0.65714;EFF=INTERGENIC(MODIFIER||||||||||1) FN2339.SNP.10:15850750 chr10:015850750 0 W/15850750-15850750 FN2339 SNP A -> G AC=1;AN=192;BQB=0.958857;DP=4260;DP4=1874,2101,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28561e-11;MQSB=0.96447;RPB=0.66164;SGB=39.1713;VDB=0.187786;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.10:15859560 chr10:015859560 0 W/15859560-15859560 FN1030-S Single Base Substitution C-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN2781-S.SNP.10:15876262 chr10:015876262 0 W/15876262-15876262 FN2781-S SNP G -> T AC=1;AN=198;BQB=0.9779;DP=3730;DP4=1923,1548,17,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.04448e-14;MQSB=0.898106;RPB=0.372217;SGB=47.5102;VDB=0.197285;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G640C|691|LOC_Os10g30530|protein_coding|CODING|LOC_Os10g30530.1|1|1) FN2781-S.SNP.10:15876264 chr10:015876264 0 W/15876264-15876264 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.982561;DP=3689;DP4=1905,1509,16,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.06649e-14;MQSB=0.882202;RPB=0.186729;SGB=68.91;VDB=0.222071;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G640|691|LOC_Os10g30530|protein_coding|CODING|LOC_Os10g30530.1|1|1) FN685-S.SNP.10:15877862 chr10:015877862 0 W/15877862-15877862 FN685-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g30540 lectin-like receptor kinase, putative, expressed SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN1120-S.SNP.10:15878113 chr10:015878113 0 W/15878113-15878113 FN1120-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2487.SNP.10:15884726 chr10:015884726 0 W/15884726-15884726 FN2487 SNP T -> C AC=2;AN=200;BQB=0.474891;DP=4876;DP4=2027,2380,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000205086;MQB=4.31975e-26;MQSB=0.748214;RPB=0.39011;SGB=105.035;VDB=0.706462;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.10:15889817 chr10:015889817 0 W/15889817-15889817 FN898-S Single Base Substitution T-C INTRON HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN2678-S.SNP.10:15900494 chr10:015900494 0 W/15900494-15900494 FN2678-S SNP T -> A AC=1;AN=200;BQB=0.354677;DP=5080;DP4=2671,2179,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00019685;MQB=6.69319e-08;MQSB=0.991632;RPB=0.854938;SGB=33.0593;VDB=0.194617;EFF=INTRON(MODIFIER||||497|LOC_Os10g30560|protein_coding|CODING|LOC_Os10g30560.1|1|1) FN2387.SNP.10:15903051 chr10:015903051 0 W/15903051-15903051 FN2387 SNP C -> G AC=1;AN=192;BQB=0.737481;DP=4471;DP4=2072,1841,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.81958e-06;MQSB=0.662936;RPB=0.857342;SGB=28.9139;VDB=0.312584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.10:15906346 chr10:015906346 0 W/15906346-15906346 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1634-S.SNP.10:15906347 chr10:015906347 0 W/15906347-15906347 FN1634-S Single Base Substitution G-A INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. W472-5-1.SNP.10:15910808 chr10:015910808 0 W/15910808-15910808 W472-5-1 Single Base Substitution A-T INTERGENIC HET SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3715-S.SNP.10:15911545 chr10:015911545 0 W/15911545-15911545 FN3715-S SNP C -> A AC=1;AN=190;BQB=0.995274;DP=3295;DP4=1772,1361,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30815e-09;MQSB=0.841259;RPB=0.760241;SGB=71.8647;VDB=0.631587;EFF=UTR_5_PRIME(MODIFIER||4||808|LOC_Os10g30580|protein_coding|CODING|LOC_Os10g30580.1|1|1) FN1224-S.SNP.10:15912613 chr10:015912613 0 W/15912613-15912613 FN1224-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2247-S.SNP.10:15913666 chr10:015913666 0 W/15913666-15913666 FN2247-S SNP T -> C AC=1;AN=190;BQB=0.99795;DP=4772;DP4=1997,2394,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.78945e-11;MQSB=0.746948;RPB=0.806088;SGB=60.9777;VDB=0.951997;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L384|808|LOC_Os10g30580|protein_coding|CODING|LOC_Os10g30580.1|4|1) FN3700-S.SNP.10:15917931 chr10:015917931 0 W/15917931-15917931 FN3700-S SNP C -> T AC=1;AN=190;BQB=0.994805;DP=2073;DP4=988,971,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.27941e-09;MQSB=0.694767;RPB=0.824114;SGB=85.5263;VDB=0.456643;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.10:15924800 chr10:015924800 0 W/15924800-15924800 FN4275-S SNP A -> T AC=2;AN=170;BQB=0.97889;DP=2346;DP4=1155,1089,14,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.25268e-19;MQSB=0.99829;RPB=0.269161;SGB=103.731;VDB=0.83968;EFF=INTERGENIC(MODIFIER||||||||||1) FN409-S.SNP.10:15936652 chr10:015936652 0 W/15936652-15936652 FN409-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN894-S.SNP.10:15937240 chr10:015937240 0 W/15937240-15937240 FN894-S Single Base Substitution C-T INTERGENIC HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN1353-S.SNP.10:15938047 chr10:015938047 0 W/15938047-15938047 FN1353-S Single Base Substitution A-T INTERGENIC HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-23.SNP.10:15939926 chr10:015939926 0 W/15939926-15939926 FN-23 Single Base Substitution C-T INTRON Homo SNo: 23, Mutant_ID: FN-23, Generation: M2, Mutations: 43, Genes: 34, Seed availability: Yes. FN2498.SNP.10:15941827 chr10:015941827 0 W/15941827-15941827 FN2498 SNP T -> G AC=1;AN=200;BQB=0.978112;DP=4543;DP4=2125,2055,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75827e-16;MQSB=0.924663;RPB=0.978411;SGB=94.3471;VDB=0.768769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E167A|492|LOC_Os10g30620|protein_coding|CODING|LOC_Os10g30620.1|2|1) FN2790-S.SNP.10:15942131 chr10:015942131 0 W/15942131-15942131 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.63965;DP=3658;DP4=1505,1948,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.27432e-06;MQSB=0.668315;RPB=0.705596;SGB=24.1541;VDB=0.84667;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P136|492|LOC_Os10g30620|protein_coding|CODING|LOC_Os10g30620.1|1|1) FN2489.SNP.10:15951113 chr10:015951113 0 W/15951113-15951113 FN2489 SNP T -> A AC=1;AN=200;BQB=0.967926;DP=4502;DP4=2023,2239,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.67e-14;MQSB=0.735303;RPB=0.996693;SGB=95.7111;VDB=0.142407;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.10:15954531 chr10:015954531 0 W/15954531-15954531 W42-1-3S-1 Single Base Substitution G-T INTERGENIC HET SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2407.SNP.10:15959652 chr10:015959652 0 W/15959652-15959652 FN2407 SNP C -> T AC=1;AN=200;BQB=0.212254;DP=7010;DP4=3470,3208,11,9;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.162482;MQB=0.538105;MQSB=0;RPB=0.0721869;SGB=12.7003;VDB=0.920182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A1604T|1954|LOC_Os10g30660|protein_coding|CODING|LOC_Os10g30660.1|5|1) FN3434-S.SNP.10:15964442 chr10:015964442 0 W/15964442-15964442 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.984998;DP=5883;DP4=3295,2480,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.190379;MQB=0.0490177;MQSB=0.0903612;RPB=0.2455;SGB=70.9657;VDB=0.701555;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R104*|1954|LOC_Os10g30660|protein_coding|CODING|LOC_Os10g30660.1|1|1);LOF=(LOC_Os10g30660|LOC_Os10g30660|1|1.00);NMD=(LOC_Os10g30660|LOC_Os10g30660|1|1.00) FN939-S.SNP.10:15968712 chr10:015968712 0 W/15968712-15968712 FN939-S Single Base Substitution C-T INTERGENIC HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN-216.SNP.10:15972716 chr10:015972716 0 W/15972716-15972716 FN-216 Single Base Substitution G-A INTERGENIC HOMO SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN-304.SNP.10:15972716 chr10:015972716 0 W/15972716-15972716 FN-304 Single Base Substitution G-A INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN3447-S.SNP.10:15972716 chr10:015972716 0 W/15972716-15972716 FN3447-S SNP G -> A AC=2;AN=184;BQB=0.879631;DP=2840;DP4=1370,1372,13,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.59488e-13;MQSB=0.999198;RPB=0.971153;SGB=98.4821;VDB=0.9185;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.10:15982657 chr10:015982657 0 W/15982657-15982657 FN2498 SNP C -> A AC=1;AN=200;BQB=0.562714;DP=13681;DP4=6720,6039,18,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=0.000907039;MQSB=0.348487;RPB=0.217257;SGB=-208.054;VDB=0.637356;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.10:15983038 chr10:015983038 0 W/15983038-15983038 FN1615-S Single Base Substitution C-T INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3525-S.SNP.10:15983091 chr10:015983091 0 W/15983091-15983091 FN3525-S SNP A -> G AC=2;AN=188;BQB=0.698339;DP=2808;DP4=1224,1488,13,8;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=5.17568e-09;MQSB=0.0829369;RPB=0.679602;SGB=64.3306;VDB=0.29628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.10:15983886 chr10:015983886 0 W/15983886-15983886 FN2556-S SNP A -> T AC=1;AN=198;BQB=0.586967;DP=4343;DP4=1532,2441,6,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.05058e-14;MQSB=0.755493;RPB=0.994173;SGB=90.4807;VDB=0.00125064;EFF=UTR_5_PRIME(MODIFIER||190||279|LOC_Os10g30690|protein_coding|CODING|LOC_Os10g30690.1|1|1) FN926-S.SNP.10:15989614 chr10:015989614 0 W/15989614-15989614 FN926-S Single Base Substitution G-A INTERGENIC HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-335.SNP.10:15995155 chr10:015995155 0 W/15995155-15995155 FN-335 Single Base Substitution A-G INTERGENIC HOMO SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2150-S.SNP.10:15995517 chr10:015995517 0 W/15995517-15995517 FN2150-S SNP A -> G AC=1;AN=168;BQB=0.993616;DP=3825;DP4=2089,1700,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.73447e-12;MQSB=0.93622;RPB=0.826828;SGB=55.3328;VDB=0.141833;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.10:15998694 chr10:015998694 0 W/15998694-15998694 FN2374 SNP T -> C AC=1;AN=192;BQB=0.873639;DP=4809;DP4=2096,2487,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.17115e-08;MQSB=0.184703;RPB=0.594407;SGB=62.9035;VDB=0.324984;EFF=INTRON(MODIFIER||||274|LOC_Os10g30719|protein_coding|CODING|LOC_Os10g30719.1|2|1) FN1582-S.SNP.10:16021815 chr10:016021815 0 W/16021815-16021815 FN1582-S Single Base Substitution A-C INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN941-S.SNP.10:16024173 chr10:016024173 0 W/16024173-16024173 FN941-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2160-S.SNP.10:16029807 chr10:016029807 0 W/16029807-16029807 FN2160-S SNP C -> A AC=2;AN=168;BQB=0.0157101;DP=3585;DP4=1762,1712,24,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.07875e-20;MQSB=0.895854;RPB=0.963634;SGB=-674.244;VDB=0.261298;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.10:16030529 chr10:016030529 0 W/16030529-16030529 FN3419-S SNP G -> T AC=1;AN=184;BQB=0.648055;DP=2696;DP4=1348,1255,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69858e-07;MQSB=0.836399;RPB=0.941958;SGB=23.2751;VDB=0.541849;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.10:16054844 chr10:016054844 0 W/16054844-16054844 FN1320-S Single Base Substitution A-G INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3481-S.SNP.10:16055884 chr10:016055884 0 W/16055884-16055884 FN3481-S SNP T -> A AC=1;AN=184;BQB=0.902449;DP=2753;DP4=1276,1387,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.74044e-09;MQSB=0.823132;RPB=0.927542;SGB=8.32411;VDB=0.859734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttA/ttT|L395F|591|LOC_Os10g30826|protein_coding|CODING|LOC_Os10g30826.1|1|1) FN-228.SNP.10:16056175 chr10:016056175 0 W/16056175-16056175 FN-228 Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2261-S.SNP.10:16057586 chr10:016057586 0 W/16057586-16057586 FN2261-S SNP T -> C AC=1;AN=190;BQB=0.518925;DP=5032;DP4=2353,2360,16,30;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00576312;MQB=8.07223e-05;MQSB=0.998592;RPB=0.348871;SGB=-48.8159;VDB=0.286261;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.10:16058281 chr10:016058281 0 W/16058281-16058281 FN3429-S SNP A -> G AC=1;AN=184;BQB=0.958037;DP=2828;DP4=1225,1496,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0106082;MQB=0.00134037;MQSB=0.0390381;RPB=0.33232;SGB=44.2207;VDB=0.704051;EFF=INTRON(MODIFIER||||172|LOC_Os10g30832|protein_coding|CODING|LOC_Os10g30832.1|2|1) FN3883-S.SNP.10:16059192 chr10:016059192 0 W/16059192-16059192 FN3883-S SNP A -> C AC=1;AN=158;BQB=0.832886;DP=2536;DP4=1134,1220,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.72706e-08;MQSB=0.306032;RPB=0.516295;SGB=60.1755;VDB=0.25488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.10:16060305 chr10:016060305 0 W/16060305-16060305 FN1526-S Single Base Substitution G-A INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1042-S.SNP.10:16062725 chr10:016062725 0 W/16062725-16062725 FN1042-S Single Base Substitution T-A INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3941-S.SNP.10:16075811 chr10:016075811 0 W/16075811-16075811 FN3941-S SNP C -> T AC=2;AN=168;BQB=0.96276;DP=2553;DP4=1227,1220,13,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.30289e-15;MQSB=0.96833;RPB=0.309508;SGB=82.7794;VDB=0.349294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.10:16077033 chr10:016077033 0 W/16077033-16077033 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.278655;DP=4462;DP4=2261,1958,17,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.79893e-19;MQSB=0.600088;RPB=0.931186;SGB=-2.5285;VDB=0.404302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.10:16077277 chr10:016077277 0 W/16077277-16077277 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.996082;DP=2898;DP4=1441,1336,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.76968e-09;MQSB=0.984341;RPB=0.625835;SGB=46.7622;VDB=0.844875;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.10:16077566 chr10:016077566 0 W/16077566-16077566 W138-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3523-S.SNP.10:16077925 chr10:016077925 0 W/16077925-16077925 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.795994;DP=3564;DP4=1684,1804,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.26738e-12;MQSB=0.977444;RPB=0.838523;SGB=85.3253;VDB=0.580132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.10:16077936 chr10:016077936 0 W/16077936-16077936 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.839634;DP=3538;DP4=1618,1842,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.45233e-11;MQSB=0.925648;RPB=0.980565;SGB=67.1521;VDB=0.10895;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.10:16089661 chr10:016089661 0 W/16089661-16089661 FN3893-S SNP A -> T AC=2;AN=158;BQB=0.904999;DP=2801;DP4=1373,1292,13,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.50398e-15;MQSB=0.940241;RPB=0.974815;SGB=121.348;VDB=0.66276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.10:16090777 chr10:016090777 0 W/16090777-16090777 FN3652-S SNP G -> A AC=2;AN=190;BQB=0.966452;DP=3157;DP4=1479,1478,22,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.54571e-16;MQSB=0.741295;RPB=0.956978;SGB=103.624;VDB=0.656819;EFF=INTERGENIC(MODIFIER||||||||||1) FN3842-S.SNP.10:16093888 chr10:016093888 0 W/16093888-16093888 FN3842-S SNP C -> T AC=1;AN=190;BQB=0.965848;DP=2255;DP4=1124,1053,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38653e-08;MQSB=0.981378;RPB=0.992032;SGB=43.2083;VDB=0.861425;EFF=INTRON(MODIFIER||||215|LOC_Os10g30860|protein_coding|CODING|LOC_Os10g30860.1|1|1) FN3418-S.SNP.10:16095248 chr10:016095248 0 W/16095248-16095248 FN3418-S SNP A -> G AC=1;AN=184;BQB=0.944795;DP=2411;DP4=1264,1061,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000211899;MQSB=0.858776;RPB=0.969298;SGB=30.6558;VDB=0.333755;EFF=INTRON(MODIFIER||||215|LOC_Os10g30860|protein_coding|CODING|LOC_Os10g30860.1|3|1) FN3610-S.SNP.10:16100503 chr10:016100503 0 W/16100503-16100503 FN3610-S SNP C -> T AC=1;AN=190;BQB=0.237994;DP=3712;DP4=1796,1715,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.02117e-08;MQSB=0.950727;RPB=0.308497;SGB=13.4344;VDB=0.189449;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.10:16104486 chr10:016104486 0 W/16104486-16104486 FN391-S Single Base Substitution C-T INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3509-S.SNP.10:16108303 chr10:016108303 0 W/16108303-16108303 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.699291;DP=2743;DP4=1484,1204,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.10829e-08;MQSB=0.924353;RPB=0.971236;SGB=32.441;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.10:16116685 chr10:016116685 0 W/16116685-16116685 FN-174 Single Base Substitution A-T INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN2577-S.SNP.10:16117989 chr10:016117989 0 W/16117989-16117989 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.669604;DP=4412;DP4=1823,2090,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.30416e-13;MQSB=0.919148;RPB=0.755108;SGB=37.1297;VDB=0.251772;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.10:16131018 chr10:016131018 0 W/16131018-16131018 FN355-S Single Base Substitution A-T INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2365.SNP.10:16143024 chr10:016143024 0 W/16143024-16143024 FN2365 SNP T -> C AC=2;AN=192;BQB=0.987757;DP=4536;DP4=2262,1780,11,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.83494e-16;MQSB=0.999319;RPB=0.976047;SGB=51.9931;VDB=0.0470298;EFF=INTRON(MODIFIER||||262|LOC_Os10g30944|protein_coding|CODING|LOC_Os10g30944.2|1|1) FN2365.SNP.10:16143025 chr10:016143025 0 W/16143025-16143025 FN2365 SNP C -> T AC=2;AN=192;BQB=0.796932;DP=4554;DP4=2374,1892,11,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.78095e-14;MQSB=0.976232;RPB=0.994269;SGB=71.8591;VDB=0.134098;EFF=INTRON(MODIFIER||||262|LOC_Os10g30944|protein_coding|CODING|LOC_Os10g30944.2|1|1) FN2365.SNP.10:16143029 chr10:016143029 0 W/16143029-16143029 FN2365 SNP C -> T AC=2;AN=192;BQB=0.501088;DP=4567;DP4=2386,1892,14,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.06954e-16;MQSB=0.99558;RPB=0.967405;SGB=24.5626;VDB=0.111467;EFF=INTRON(MODIFIER||||262|LOC_Os10g30944|protein_coding|CODING|LOC_Os10g30944.2|1|1) FN3956-S.SNP.10:16145553 chr10:016145553 0 W/16145553-16145553 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.960855;DP=2798;DP4=1415,1277,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.71999e-06;MQSB=0.992802;RPB=0.22706;SGB=43.3113;VDB=0.30917;EFF=INTRON(MODIFIER||||262|LOC_Os10g30944|protein_coding|CODING|LOC_Os10g30944.2|1|1) FN2403.SNP.10:16159474 chr10:016159474 0 W/16159474-16159474 FN2403 SNP G -> T AC=1;AN=200;BQB=0.742235;DP=3973;DP4=1755,1992,6,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00302039;MQB=0.0184323;MQSB=3.54898e-05;RPB=0.962729;SGB=61.9006;VDB=0.0805134;EFF=UTR_5_PRIME(MODIFIER||211||111|LOC_Os10g30951|protein_coding|CODING|LOC_Os10g30951.1|1|1),UTR_5_PRIME(MODIFIER||211||111|LOC_Os10g30951|protein_coding|CODING|LOC_Os10g30951.2|1|1) FN3362-S.SNP.10:16162526 chr10:016162526 0 W/16162526-16162526 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.973174;DP=2853;DP4=1420,1358,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67757e-08;MQSB=0.995594;RPB=0.921579;SGB=53.2642;VDB=0.893839;EFF=UTR_5_PRIME(MODIFIER||12||101|LOC_Os10g30970|protein_coding|CODING|LOC_Os10g30970.1|5|1) FN632-S.SNP.10:16166608 chr10:016166608 0 W/16166608-16166608 FN632-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1115-S.SNP.10:16170449 chr10:016170449 0 W/16170449-16170449 FN1115-S Single Base Substitution G-T INTERGENIC HOMO SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN2472.SNP.10:16178587 chr10:016178587 0 W/16178587-16178587 FN2472 SNP C -> T AC=1;AN=200;BQB=0.9953;DP=5203;DP4=2704,2181,17,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.67257e-20;MQSB=0.98413;RPB=0.871032;SGB=112.373;VDB=0.482262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.10:16187662 chr10:016187662 0 W/16187662-16187662 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.93798;DP=2479;DP4=1203,1177,11,16;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.0146e-16;MQSB=0.99999;RPB=0.869889;SGB=81.2457;VDB=0.949102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.10:16193897 chr10:016193897 0 W/16193897-16193897 FN3383-S SNP T -> G AC=1;AN=184;BQB=0.860873;DP=3019;DP4=1529,1380,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.68812e-07;MQSB=0.785643;RPB=0.918288;SGB=66.8296;VDB=0.812692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ctt|I457L|895|LOC_Os10g31020|protein_coding|CODING|LOC_Os10g31020.1|2|1) FN4178-S.SNP.10:16201001 chr10:016201001 0 W/16201001-16201001 FN4178-S SNP T -> C AC=1;AN=170;BQB=0.748715;DP=2621;DP4=1254,1218,6,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.50418e-10;MQSB=0.835489;RPB=0.992509;SGB=8.66042;VDB=0.650951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.10:16202739 chr10:016202739 0 W/16202739-16202739 FN4172-S SNP T -> A AC=2;AN=170;BQB=0.744616;DP=2317;DP4=1146,1093,12,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.82824e-17;MQSB=0.999848;RPB=0.846675;SGB=118.955;VDB=0.640778;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A144|1013|LOC_Os10g31030|protein_coding|CODING|LOC_Os10g31030.1|2|1) FN4172-S.SNP.10:16202740 chr10:016202740 0 W/16202740-16202740 FN4172-S SNP G -> A AC=2;AN=170;BQB=0.499443;DP=2301;DP4=1157,1070,13,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.15757e-17;MQSB=0.99807;RPB=0.839683;SGB=58.9663;VDB=0.670479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D145N|1013|LOC_Os10g31030|protein_coding|CODING|LOC_Os10g31030.1|2|1) FN3430-S.SNP.10:16214614 chr10:016214614 0 W/16214614-16214614 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.994698;DP=3204;DP4=1768,1340,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00780275;MQB=2.36996e-06;MQSB=0.760305;RPB=0.968055;SGB=20.7533;VDB=0.806879;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.10:16221895 chr10:016221895 0 W/16221895-16221895 W138-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2788-S.SNP.10:16226553 chr10:016226553 0 W/16226553-16226553 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.785114;DP=3980;DP4=1757,1864,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.93851e-13;MQSB=0.957231;RPB=0.87361;SGB=-40.6893;VDB=0.0713405;EFF=INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.1|1|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.5|1|1) FN-234.SNP.10:16227292 chr10:016227292 0 W/16227292-16227292 FN-234 Single Base Substitution A-C INTRON HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3432-S.SNP.10:16236947 chr10:016236947 0 W/16236947-16236947 FN3432-S SNP C -> A AC=1;AN=184;BQB=0.965749;DP=3452;DP4=1327,1968,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.03886e-10;MQSB=0.989559;RPB=0.997146;SGB=75.8731;VDB=0.8553;EFF=INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.1|2|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.2|2|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.3|2|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.4|2|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.5|2|1),INTRON(MODIFIER||||567|LOC_Os10g31040|protein_coding|CODING|LOC_Os10g31040.6|2|1) FN2387.SNP.10:16249881 chr10:016249881 0 W/16249881-16249881 FN2387 SNP G -> A AC=1;AN=192;BQB=0.97329;DP=4525;DP4=2032,2158,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37994e-06;MQSB=0.500539;RPB=0.923526;SGB=53.7748;VDB=0.18489;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.10:16251125 chr10:016251125 0 W/16251125-16251125 FN2721-S SNP A -> G AC=2;AN=200;BQB=0.578094;DP=4640;DP4=2282,2068,14,15;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000215517;MQB=1.23405e-08;MQSB=0.494031;RPB=0.999838;SGB=94.3471;VDB=0.544138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.10:16251372 chr10:016251372 0 W/16251372-16251372 FN2436 SNP A -> C AC=1;AN=200;BQB=0.992041;DP=4506;DP4=2110,2107,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.23554e-15;MQSB=0.101791;RPB=0.58987;SGB=97.9523;VDB=0.064177;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.10:16252795 chr10:016252795 0 W/16252795-16252795 W598-2-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1203-S.SNP.10:16263497 chr10:016263497 0 W/16263497-16263497 FN1203-S Single Base Substitution G-T INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN654-S.SNP.10:16267125 chr10:016267125 0 W/16267125-16267125 FN654-S Single Base Substitution G-C INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-293.SNP.10:16271613 chr10:016271613 0 W/16271613-16271613 FN-293 Single Base Substitution C-T INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1283-S.SNP.10:16277625 chr10:016277625 0 W/16277625-16277625 FN1283-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3668-S.SNP.10:16286989 chr10:016286989 0 W/16286989-16286989 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.941408;DP=2719;DP4=1351,1297,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.79136e-06;MQSB=0.340395;RPB=0.998153;SGB=28.9929;VDB=0.488366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.10:16290743 chr10:016290743 0 W/16290743-16290743 FN2612-S SNP C -> T AC=1;AN=198;BQB=0.265728;DP=3753;DP4=1998,1570,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.74266e-09;MQSB=0.732087;RPB=0.63277;SGB=67.9293;VDB=0.993475;EFF=INTRON(MODIFIER||||72|LOC_Os10g31110|protein_coding|CODING|LOC_Os10g31110.1|1|1) FN-259.SNP.10:16292125 chr10:016292125 0 W/16292125-16292125 FN-259 Single Base Substitution G-A INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN185-2_3_4.SNP.10:16295470 chr10:016295470 0 W/16295470-16295470 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.32324;DP=1504;DP4=943,521,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00864362;MQB=0.00555508;MQSB=0.00673686;RPB=0.0906737;SGB=-0.634963;VDB=0.00505206;EFF=INTRON(MODIFIER||||348|LOC_Os10g31120|protein_coding|CODING|LOC_Os10g31120.1|1|1) FN2663-S.SNP.10:16297997 chr10:016297997 0 W/16297997-16297997 FN2663-S SNP C -> G AC=1;AN=200;BQB=0.733613;DP=4856;DP4=2273,2354,15,7;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0275947;MQB=0.0185316;MQSB=0.000203424;RPB=0.327163;SGB=69.1109;VDB=0.0889475;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gGa|A135G|308|LOC_Os10g31130|protein_coding|CODING|LOC_Os10g31130.1|1|1) FN3448-S.SNP.10:16300233 chr10:016300233 0 W/16300233-16300233 FN3448-S SNP G -> A AC=1;AN=184;BQB=0.895081;DP=3246;DP4=1368,1742,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09234e-08;MQSB=0.872202;RPB=0.117003;SGB=53.2642;VDB=0.114849;EFF=INTERGENIC(MODIFIER||||||||||1) FN-298.SNP.10:16300821 chr10:016300821 0 W/16300821-16300821 FN-298 Single Base Substitution G-T INTERGENIC HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN3593-S.SNP.10:16303643 chr10:016303643 0 W/16303643-16303643 FN3593-S SNP A -> T AC=1;AN=190;BQB=0.703388;DP=2593;DP4=1354,1157,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.05966e-06;MQSB=0.904195;RPB=0.998742;SGB=36.1006;VDB=0.58245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.10:16308307 chr10:016308307 0 W/16308307-16308307 FN2221-S SNP A -> G AC=1;AN=190;BQB=0.72831;DP=5266;DP4=2605,2273,13,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.82223e-18;MQSB=0.959466;RPB=0.747971;SGB=96.5165;VDB=0.920656;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.10:16312027 chr10:016312027 0 W/16312027-16312027 FN1545-S Single Base Substitution G-T INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2792-S.SNP.10:16314018 chr10:016314018 0 W/16314018-16314018 FN2792-S SNP A -> G AC=2;AN=198;BQB=0.981471;DP=4030;DP4=1861,1978,18,21;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=2.08442e-11;MQSB=5.1128e-05;RPB=0.630739;SGB=173.617;VDB=0.310343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.10:16316636 chr10:016316636 0 W/16316636-16316636 FN1735-S SNP A -> G AC=1;AN=188;BQB=0.873482;DP=3440;DP4=1708,1690,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.08637e-13;MQSB=0.998998;RPB=0.962345;SGB=54.0524;VDB=0.815847;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.10:16325483 chr10:016325483 0 W/16325483-16325483 FN358-S Single Base Substitution G-T INTRON HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2084-S.SNP.10:16338348 chr10:016338348 0 W/16338348-16338348 FN2084-S SNP T -> C AC=1;AN=168;BQB=0.937958;DP=4308;DP4=2518,1747,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.53263e-14;MQSB=0.998109;RPB=0.308872;SGB=17.068;VDB=0.0627988;EFF=INTRON(MODIFIER||||150|LOC_Os10g31180|protein_coding|CODING|LOC_Os10g31180.1|2|1) FN2583-S.SNP.10:16340448 chr10:016340448 0 W/16340448-16340448 FN2583-S SNP G -> T AC=1;AN=200;BQB=0.817719;DP=4725;DP4=2268,2185,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.18451e-08;MQSB=0.933255;RPB=0.832268;SGB=21.6694;VDB=0.814914;EFF=INTRON(MODIFIER||||150|LOC_Os10g31180|protein_coding|CODING|LOC_Os10g31180.1|1|1) FN497-S.SNP.10:16342588 chr10:016342588 0 W/16342588-16342588 FN497-S Single Base Substitution A-G INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN3433-S.SNP.10:16343022 chr10:016343022 0 W/16343022-16343022 FN3433-S SNP T -> C AC=2;AN=184;BQB=0.647467;DP=2487;DP4=1138,1247,11,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.82334e-09;MQSB=0.997332;RPB=0.469112;SGB=35.884;VDB=0.629222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.10:16353934 chr10:016353934 0 W/16353934-16353934 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.458682;DP=4305;DP4=2122,1894,18,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000232288;MQB=3.4503e-14;MQSB=0.909682;RPB=0.682624;SGB=28.9731;VDB=0.282287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.10:16361754 chr10:016361754 0 W/16361754-16361754 FN3768-S SNP G -> A AC=1;AN=190;BQB=0.996669;DP=2874;DP4=1408,1365,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.19997e-10;MQSB=0.993361;RPB=0.958255;SGB=43.2083;VDB=0.319844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.10:16362199 chr10:016362199 0 W/16362199-16362199 FN2676-S SNP T -> C AC=2;AN=200;BQB=0.616357;DP=4183;DP4=2012,1908,28,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.04016e-32;MQSB=0.978265;RPB=0.775877;SGB=233.866;VDB=0.388587;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.10:16370041 chr10:016370041 0 W/16370041-16370041 FN1076-S Single Base Substitution G-A INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN964-S.SNP.10:16371270 chr10:016371270 0 W/16371270-16371270 FN964-S Single Base Substitution G-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN508-S.SNP.10:16372939 chr10:016372939 0 W/16372939-16372939 FN508-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN564-S.SNP.10:16381556 chr10:016381556 0 W/16381556-16381556 FN564-S Single Base Substitution T-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN2113-S.SNP.10:16387756 chr10:016387756 0 W/16387756-16387756 FN2113-S SNP C -> T AC=2;AN=168;BQB=0.994962;DP=3026;DP4=1408,1562,24,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.55865e-22;MQSB=0.974439;RPB=0.733771;SGB=-51.4578;VDB=0.323012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3864-S.SNP.10:16389919 chr10:016389919 0 W/16389919-16389919 FN3864-S SNP A -> T AC=1;AN=158;BQB=0.959341;DP=2680;DP4=1126,1415,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.51259e-05;MQSB=0.963239;RPB=0.995772;SGB=14.3409;VDB=0.805198;EFF=INTRON(MODIFIER||||796|LOC_Os10g31250|protein_coding|CODING|LOC_Os10g31250.1|1|1) FN1375-S.SNP.10:16391620 chr10:016391620 0 W/16391620-16391620 FN1375-S Single Base Substitution C-G INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2483.SNP.10:16398581 chr10:016398581 0 W/16398581-16398581 FN2483 SNP A -> T AC=1;AN=200;BQB=0.975548;DP=5334;DP4=2497,2573,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99278e-13;MQSB=0.931194;RPB=0.9952;SGB=83.5316;VDB=0.24124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.10:16399902 chr10:016399902 0 W/16399902-16399902 FN3902-S SNP C -> T AC=2;AN=158;BQB=0.926665;DP=1419;DP4=686,594,6,4;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.10963e-05;MQSB=0.343366;RPB=0.416568;SGB=9.60209;VDB=0.105532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.10:16399903 chr10:016399903 0 W/16399903-16399903 FN3902-S SNP C -> T AC=2;AN=158;BQB=0.985275;DP=1420;DP4=672,604,6,4;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.12816e-05;MQSB=0.447968;RPB=0.560645;SGB=23.9652;VDB=0.189841;EFF=INTERGENIC(MODIFIER||||||||||1) FN721-S.SNP.10:16406196 chr10:016406196 0 W/16406196-16406196 FN721-S Single Base Substitution C-A INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN-246.SNP.10:16407846 chr10:016407846 0 W/16407846-16407846 FN-246 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2085-S.SNP.10:16412504 chr10:016412504 0 W/16412504-16412504 FN2085-S SNP C -> A AC=1;AN=168;BQB=0.0504938;DP=4207;DP4=2137,2018,13,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.75384e-10;MQSB=0.988598;RPB=0.909471;SGB=-328.596;VDB=0.643746;EFF=INTRON(MODIFIER||||811|LOC_Os10g31290|protein_coding|CODING|LOC_Os10g31290.1|3|1) FN-234.SNP.10:16423707 chr10:016423707 0 W/16423707-16423707 FN-234 Single Base Substitution A-T INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-234.SNP.10:16423710 chr10:016423710 0 W/16423710-16423710 FN-234 Single Base Substitution G-A INTERGENIC HET SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN-397.SNP.10:16440320 chr10:016440320 0 W/16440320-16440320 FN-397 Single Base Substitution C-T INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2240-S.SNP.10:16443073 chr10:016443073 0 W/16443073-16443073 FN2240-S SNP G -> A AC=1;AN=190;BQB=0.643532;DP=4271;DP4=1778,2172,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000234137;MQB=8.19197e-06;MQSB=0.317241;RPB=0.95166;SGB=18.552;VDB=0.330822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.10:16454233 chr10:016454233 0 W/16454233-16454233 FN3395-S SNP C -> T AC=2;AN=184;BQB=0.0720533;DP=2517;DP4=1143,1221,9,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.65394e-11;MQSB=0.94665;RPB=0.832917;SGB=31.1509;VDB=0.754774;EFF=INTRON(MODIFIER||||297|LOC_Os10g31370|protein_coding|CODING|LOC_Os10g31370.1|1|1) FN430-S.SNP.10:16460233 chr10:016460233 0 W/16460233-16460233 FN430-S Single Base Substitution C-T INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN713-S.SNP.10:16464903 chr10:016464903 0 W/16464903-16464903 FN713-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN2675-S.SNP.10:16473108 chr10:016473108 0 W/16473108-16473108 FN2675-S SNP T -> A AC=2;AN=196;BQB=0.839374;DP=1115;DP4=271,661,5,9;HOB=0.0201999;ICB=0.494951;MQ=34;MQ0F=0.00627803;MQB=0.223735;MQSB=5.75109e-13;RPB=0.998738;SGB=23.1615;VDB=0.00676177;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.10:16473599 chr10:016473599 0 W/16473599-16473599 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1426-S.SNP.10:16482019 chr10:016482019 0 W/16482019-16482019 FN1426-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31440 retrotransposon protein, putative, unclassified, expressed SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1426-S.SNP.10:16482020 chr10:016482020 0 W/16482020-16482020 FN1426-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31440 retrotransposon protein, putative, unclassified, expressed SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2540-S.SNP.10:16488963 chr10:016488963 0 W/16488963-16488963 FN2540-S SNP T -> A AC=1;AN=198;BQB=0.962111;DP=3698;DP4=1789,1728,9,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.04362e-07;MQSB=0.940531;RPB=0.904712;SGB=29.3637;VDB=0.0433658;EFF=INTRAGENIC(MODIFIER|||||LOC_Os10g31460||CODING|||1) FN921-S.SNP.10:16495696 chr10:016495696 0 W/16495696-16495696 FN921-S Single Base Substitution C-G INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-157.SNP.10:16498345 chr10:016498345 0 W/16498345-16498345 FN-157 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31490 retrotransposon protein, putative, unclassified, expressed SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN2788-S.SNP.10:16502056 chr10:016502056 0 W/16502056-16502056 FN2788-S SNP G -> A AC=1;AN=198;BQB=0.993732;DP=4328;DP4=2431,1673,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.29541e-09;MQSB=0.288723;RPB=0.499096;SGB=81.7147;VDB=0.734739;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.10:16502180 chr10:016502180 0 W/16502180-16502180 FN930-S Single Base Substitution G-A INTERGENIC HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2607-S.SNP.10:16506887 chr10:016506887 0 W/16506887-16506887 FN2607-S SNP C -> G AC=1;AN=198;BQB=0.858467;DP=4041;DP4=1881,1951,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.26588e-07;MQSB=0.992576;RPB=0.939223;SGB=36.5539;VDB=0.279601;EFF=INTERGENIC(MODIFIER||||||||||1) FN853-S.SNP.10:16508168 chr10:016508168 0 W/16508168-16508168 FN853-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31510 glycine-rich cell wall structural protein 2 precursor, putative, expressed SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN-261.SNP.10:16527069 chr10:016527069 0 W/16527069-16527069 FN-261 Single Base Substitution T-G INTERGENIC HET SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. 702-2-1.SNP.10:16529486 chr10:016529486 0 W/16529486-16529486 702-2-1 Single Base Substitution C-T INTERGENIC Homo SNo: 1444, Mutant_ID: 702-2-1, Generation: M2, Mutations: 28, Genes: 16, Seed availability: No. FN2625-S.SNP.10:16530582 chr10:016530582 0 W/16530582-16530582 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.60603;DP=4725;DP4=2465,2075,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79264e-09;MQSB=0.946779;RPB=0.924485;SGB=86.5007;VDB=0.0826253;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.10:16536709 chr10:016536709 0 W/16536709-16536709 FN628-S Single Base Substitution G-A INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1550-S.SNP.10:16539600 chr10:016539600 0 W/16539600-16539600 FN1550-S Single Base Substitution C-T INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN2656-S.SNP.10:16546967 chr10:016546967 0 W/16546967-16546967 FN2656-S SNP C -> T AC=2;AN=200;BQB=0.966447;DP=4789;DP4=2384,2155,33,24;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.0121111;MQB=0.108726;MQSB=0.866886;RPB=0.664261;SGB=133.692;VDB=0.796901;EFF=INTERGENIC(MODIFIER||||||||||1) FN_935-1.SNP.10:16547558 chr10:016547558 0 W/16547558-16547558 FN_935-1 Single Base Substitution T-C Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN2785-S.SNP.10:16555521 chr10:016555521 0 W/16555521-16555521 FN2785-S SNP C -> A AC=1;AN=198;BQB=0.610179;DP=4389;DP4=1929,2233,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0594669;MQB=0.961892;MQSB=9.81547e-22;RPB=0.375676;SGB=25.7687;VDB=0.675225;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P1312T|1995|LOC_Os10g31590|protein_coding|CODING|LOC_Os10g31590.1|3|1) FN2418.SNP.10:16556855 chr10:016556855 0 W/16556855-16556855 FN2418 SNP C -> G AC=1;AN=200;BQB=0.0650755;DP=5412;DP4=2235,2431,362,116;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.103104;MQB=0;MQSB=0.0558764;RPB=0.0413355;SGB=-3761.09;VDB=0.997251;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N1756K|1995|LOC_Os10g31590|protein_coding|CODING|LOC_Os10g31590.1|3|1) FN456-S.SNP.10:16558249 chr10:016558249 0 W/16558249-16558249 FN456-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1373-S.SNP.10:16560729 chr10:016560729 0 W/16560729-16560729 FN1373-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN1024-S.SNP.10:16561166 chr10:016561166 0 W/16561166-16561166 FN1024-S Single Base Substitution C-T INTERGENIC HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-155.SNP.10:16567386 chr10:016567386 0 W/16567386-16567386 FN-155 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31620 glycine-rich cell wall structural protein 2 precursor, putative, expressed SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN914-S.SNP.10:16570207 chr10:016570207 0 W/16570207-16570207 FN914-S Single Base Substitution T-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2631-S.SNP.10:16571153 chr10:016571153 0 W/16571153-16571153 FN2631-S SNP A -> G AC=1;AN=200;BQB=0.897413;DP=4615;DP4=2239,2206,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216685;MQB=1.82419e-12;MQSB=0.947726;RPB=0.700334;SGB=69.1109;VDB=0.206532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.10:16572970 chr10:016572970 0 W/16572970-16572970 FN1120-S Single Base Substitution A-C INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2593-S.SNP.10:16574668 chr10:016574668 0 W/16574668-16574668 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.973032;DP=4119;DP4=1721,2108,19,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.95867e-19;MQSB=0.97748;RPB=0.918227;SGB=0.447097;VDB=0.981091;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.10:16579219 chr10:016579219 0 W/16579219-16579219 FN1545-S Single Base Substitution G-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN891-S.SNP.10:16580956 chr10:016580956 0 W/16580956-16580956 FN891-S Single Base Substitution C-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2440.SNP.10:16588864 chr10:016588864 0 W/16588864-16588864 FN2440 SNP T -> C AC=2;AN=200;BQB=0.331569;DP=4799;DP4=2278,2244,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000208377;MQB=3.86846e-26;MQSB=0.93875;RPB=0.662101;SGB=187.814;VDB=0.721536;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.10:16591985 chr10:016591985 0 W/16591985-16591985 FN524-S Single Base Substitution C-G INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN588-S.SNP.10:16594605 chr10:016594605 0 W/16594605-16594605 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2532-S.SNP.10:16604199 chr10:016604199 0 W/16604199-16604199 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.703096;DP=3887;DP4=1984,1626,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04104e-11;MQSB=0.866461;RPB=0.924815;SGB=47.5102;VDB=0.304345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.10:16604583 chr10:016604583 0 W/16604583-16604583 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN-172.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN-172 Single Base Substitution C-A INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN1026-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN1026-S Single Base Substitution C-A INTERGENIC HOMO SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN1175-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN1175-S Single Base Substitution C-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1320-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN1320-S Single Base Substitution C-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1514-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN1514-S Single Base Substitution C-A INTERGENIC Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN224-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN224-S Single Base Substitution C-A INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN4009-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN4009-S SNP C -> A AC=2;AN=168;BQB=0.995277;DP=2003;DP4=1104,804,9,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.20592e-10;MQSB=0.642347;RPB=0.083815;SGB=58.7637;VDB=0.0396505;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN508-S Single Base Substitution C-A INTERGENIC HOMO SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN672-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN672-S Single Base Substitution C-A INTERGENIC HOMO SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN748-S.SNP.10:16607758 chr10:016607758 0 W/16607758-16607758 FN748-S Single Base Substitution C-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1520-S.SNP.10:16619948 chr10:016619948 0 W/16619948-16619948 FN1520-S Single Base Substitution G-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2653-S.SNP.10:16621183 chr10:016621183 0 W/16621183-16621183 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.622979;DP=4673;DP4=2445,1977,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.71307e-18;MQSB=0.9437;RPB=0.119371;SGB=-2.82234;VDB=0.716128;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G174D|191|LOC_Os10g31710|protein_coding|CODING|LOC_Os10g31710.1|1|1) FN627-S.SNP.10:16622879 chr10:016622879 0 W/16622879-16622879 FN627-S Single Base Substitution A-C INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3383-S.SNP.10:16628651 chr10:016628651 0 W/16628651-16628651 FN3383-S SNP T -> C AC=1;AN=184;BQB=0.999961;DP=2981;DP4=1471,1335,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.25003e-10;MQSB=0.0436686;RPB=0.980996;SGB=38.4058;VDB=0.268712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.10:16630509 chr10:016630509 0 W/16630509-16630509 FN2164-S SNP A -> T AC=1;AN=168;BQB=0.124671;DP=2741;DP4=1125,1578,9,17;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0507114;MQB=0.470946;MQSB=0.12205;RPB=0.991385;SGB=-103.201;VDB=0.442354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.10:16630819 chr10:016630819 0 W/16630819-16630819 FN3852-S SNP C -> T AC=1;AN=158;BQB=0.985095;DP=2088;DP4=1042,974,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.00191571;MQB=0.635461;MQSB=0.149182;RPB=0.247108;SGB=42.6978;VDB=0.349765;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.10:16632586 chr10:016632586 0 W/16632586-16632586 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.933032;DP=2639;DP4=1463,1109,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.15635e-08;MQSB=0.0720482;RPB=0.123153;SGB=43.0708;VDB=0.00271665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.10:16637009 chr10:016637009 0 W/16637009-16637009 FN3569-S SNP C -> T AC=1;AN=188;BQB=0.999283;DP=2936;DP4=1477,1395,12,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.0799e-14;MQSB=0.996122;RPB=0.996644;SGB=103.498;VDB=0.650281;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.10:16641526 chr10:016641526 0 W/16641526-16641526 FN3830-S SNP A -> G AC=1;AN=190;BQB=0.995949;DP=2130;DP4=809,1242,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.75998e-07;MQSB=0.789823;RPB=0.440202;SGB=36.1006;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2325.SNP.10:16644349 chr10:016644349 0 W/16644349-16644349 FN2325 SNP T -> G AC=2;AN=192;BQB=0.908022;DP=5089;DP4=2433,2359,20,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.98932e-20;MQSB=0.915478;RPB=0.918382;SGB=121.76;VDB=0.252283;EFF=INTRON(MODIFIER||||126|LOC_Os10g31750|protein_coding|CODING|LOC_Os10g31750.1|1|1) FN-215.SNP.10:16645114 chr10:016645114 0 W/16645114-16645114 FN-215 Single Base Substitution G-A STOP_GAINED HET LOC_Os10g31750 hypothetical protein SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN1097-S.SNP.10:16646205 chr10:016646205 0 W/16646205-16646205 FN1097-S Single Base Substitution C-T INTERGENIC HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3881-S.SNP.10:16647315 chr10:016647315 0 W/16647315-16647315 FN3881-S SNP T -> A AC=1;AN=158;BQB=0.997334;DP=2429;DP4=1213,1129,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.62566e-05;MQSB=0.185433;RPB=0.597954;SGB=29.5899;VDB=0.0168362;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.10:16647889 chr10:016647889 0 W/16647889-16647889 FN3478-S SNP G -> C AC=1;AN=184;BQB=0.884124;DP=2663;DP4=1326,1256,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07117e-12;MQSB=0.965835;RPB=0.510955;SGB=103.004;VDB=0.496051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.10:16650932 chr10:016650932 0 W/16650932-16650932 FN2269-S SNP A -> T AC=2;AN=190;BQB=0.963488;DP=4748;DP4=2011,2318,32,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000210615;MQB=1.09791e-27;MQSB=0.915022;RPB=0.867721;SGB=69.3739;VDB=0.375867;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.10:16653638 chr10:016653638 0 W/16653638-16653638 FN441-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g31770 START domain containing protein, expressed SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3429-S.SNP.10:16662131 chr10:016662131 0 W/16662131-16662131 FN3429-S SNP C -> A AC=2;AN=184;BQB=0.97797;DP=2360;DP4=966,1330,3,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.05394e-08;MQSB=0.981162;RPB=0.0827669;SGB=48.7425;VDB=0.0436431;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.10:16664499 chr10:016664499 0 W/16664499-16664499 FN820-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g31780 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN1571-S.SNP.10:16668669 chr10:016668669 0 W/16668669-16668669 FN1571-S Single Base Substitution C-T INTRON HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN1577-S.SNP.10:16672545 chr10:016672545 0 W/16672545-16672545 FN1577-S Single Base Substitution C-A INTRON HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3445-S.SNP.10:16672599 chr10:016672599 0 W/16672599-16672599 FN3445-S SNP C -> G AC=1;AN=184;BQB=0.99256;DP=2851;DP4=1364,1387,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.57076e-07;MQSB=0.952915;RPB=0.952368;SGB=48.7425;VDB=0.919643;EFF=INTRON(MODIFIER||||378|LOC_Os10g31790|protein_coding|CODING|LOC_Os10g31790.1|2|1),INTRON(MODIFIER||||310|LOC_Os10g31790|protein_coding|CODING|LOC_Os10g31790.2|1|1) FN3418-S.SNP.10:16679084 chr10:016679084 0 W/16679084-16679084 FN3418-S SNP T -> A AC=1;AN=184;BQB=0.946441;DP=3152;DP4=1691,1293,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.92605e-10;MQSB=0.926667;RPB=0.952407;SGB=28.3187;VDB=0.765246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1439-S.SNP.10:16679549 chr10:016679549 0 W/16679549-16679549 FN1439-S Single Base Substitution C-T INTERGENIC HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN2530-S.SNP.10:16679904 chr10:016679904 0 W/16679904-16679904 FN2530-S SNP G -> A AC=2;AN=198;BQB=0.732231;DP=4319;DP4=2377,1687,18,16;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.0808e-16;MQSB=0.735052;RPB=0.594448;SGB=150.641;VDB=0.400111;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.10:16683195 chr10:016683195 0 W/16683195-16683195 FN442-S Single Base Substitution G-C INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN2444.SNP.10:16684518 chr10:016684518 0 W/16684518-16684518 FN2444 SNP A -> C AC=1;AN=200;BQB=0.716216;DP=5021;DP4=2742,1948,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.28212e-11;MQSB=0.981244;RPB=0.481977;SGB=39.9056;VDB=0.620524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.10:16688162 chr10:016688162 0 W/16688162-16688162 FN2412 SNP A -> G AC=2;AN=200;BQB=0.147375;DP=4575;DP4=2072,2007,27,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.12109e-24;MQSB=0.927841;RPB=0.54086;SGB=94.6142;VDB=0.0530123;EFF=INTRON(MODIFIER||||845|LOC_Os10g31820|protein_coding|CODING|LOC_Os10g31820.1|1|1),INTRON(MODIFIER||||822|LOC_Os10g31820|protein_coding|CODING|LOC_Os10g31820.2|1|1) FN3892-S.SNP.10:16689229 chr10:016689229 0 W/16689229-16689229 FN3892-S SNP C -> T AC=1;AN=158;BQB=0.643941;DP=2643;DP4=1285,1281,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.44347e-08;MQSB=0.99746;RPB=0.774237;SGB=50.9207;VDB=0.682336;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S266F|845|LOC_Os10g31820|protein_coding|CODING|LOC_Os10g31820.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S266F|822|LOC_Os10g31820|protein_coding|CODING|LOC_Os10g31820.2|6|1) FN1288-S.SNP.10:16691297 chr10:016691297 0 W/16691297-16691297 FN1288-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g31820 fluG, putative, expressed SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1288-S.SNP.10:16691298 chr10:016691298 0 W/16691298-16691298 FN1288-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN-303.SNP.10:16702407 chr10:016702407 0 W/16702407-16702407 FN-303 Single Base Substitution G-C INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-40.SNP.10:16707158 chr10:016707158 0 W/16707158-16707158 FN-40 Single Base Substitution A-C INTRON Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN4101-S.SNP.10:16709883 chr10:016709883 0 W/16709883-16709883 FN4101-S SNP C -> T AC=1;AN=182;BQB=0.914844;DP=2699;DP4=958,1581,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.23831e-06;MQSB=0.798134;RPB=0.953918;SGB=39.6007;VDB=0.94485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.10:16716584 chr10:016716584 0 W/16716584-16716584 FN3826-S SNP G -> A AC=1;AN=190;BQB=0.969443;DP=2431;DP4=1123,1234,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.45857e-07;MQSB=0.461841;RPB=0.838783;SGB=36.1006;VDB=0.749574;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A2316V|2405|LOC_Os10g31864|protein_coding|CODING|LOC_Os10g31864.1|49|1) FN1455-S.SNP.10:16731741 chr10:016731741 0 W/16731741-16731741 FN1455-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os10g31864 expressed protein SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2265-S.SNP.10:16735927 chr10:016735927 0 W/16735927-16735927 FN2265-S SNP G -> A AC=1;AN=190;BQB=0.872432;DP=4738;DP4=2195,2213,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.23351e-17;MQSB=0.995822;RPB=0.957006;SGB=27.4193;VDB=0.00874767;EFF=UTR_5_PRIME(MODIFIER||5956||2405|LOC_Os10g31864|protein_coding|CODING|LOC_Os10g31864.1|10|1) FN3850-S.SNP.10:16736571 chr10:016736571 0 W/16736571-16736571 FN3850-S SNP G -> A AC=1;AN=158;BQB=0.503287;DP=1959;DP4=767,1122,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.14759e-07;MQSB=0.85308;RPB=0.993084;SGB=34.0735;VDB=0.345514;EFF=INTRON(MODIFIER||||2405|LOC_Os10g31864|protein_coding|CODING|LOC_Os10g31864.1|8|1) FN1011-S.SNP.10:16751302 chr10:016751302 0 W/16751302-16751302 FN1011-S Single Base Substitution T-C INTRON HOMO SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3674-S.SNP.10:16751563 chr10:016751563 0 W/16751563-16751563 FN3674-S SNP C -> A AC=1;AN=190;BQB=0.454668;DP=2934;DP4=1405,1440,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.3884e-05;MQSB=0.95494;RPB=0.434834;SGB=53.6492;VDB=0.481142;EFF=INTRON(MODIFIER||||355|LOC_Os10g31900|protein_coding|CODING|LOC_Os10g31900.1|1|1) FN4111-S.SNP.10:16760269 chr10:016760269 0 W/16760269-16760269 FN4111-S SNP G -> A AC=2;AN=182;BQB=0.620808;DP=3311;DP4=1383,1789,17,33;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.29404e-21;MQSB=0.201411;RPB=0.986327;SGB=220.035;VDB=0.458921;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G178|491|LOC_Os10g31910|protein_coding|CODING|LOC_Os10g31910.1|2|1) FN835-S.SNP.10:16761580 chr10:016761580 0 W/16761580-16761580 FN835-S Single Base Substitution G-T INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN3353-S.SNP.10:16765084 chr10:016765084 0 W/16765084-16765084 FN3353-S SNP C -> A AC=1;AN=184;BQB=0.990395;DP=3381;DP4=1316,1952,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.53898e-06;MQSB=0.779243;RPB=0.955528;SGB=28.7043;VDB=0.644951;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.10:16766040 chr10:016766040 0 W/16766040-16766040 FN3343-S SNP T -> A AC=2;AN=184;BQB=0.987588;DP=3312;DP4=1635,1511,25,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.07105e-19;MQSB=0.823784;RPB=0.659984;SGB=113.227;VDB=0.829701;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.10:16769362 chr10:016769362 0 W/16769362-16769362 FN-66 Single Base Substitution G-T INTRON HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN3830-S.SNP.10:16773683 chr10:016773683 0 W/16773683-16773683 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.626176;DP=3374;DP4=1320,1928,6,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.65895e-10;MQSB=0.907769;RPB=0.61832;SGB=44.0907;VDB=0.570858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.10:16774938 chr10:016774938 0 W/16774938-16774938 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.276731;DP=4589;DP4=1870,2378,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14789e-08;MQSB=0.0448547;RPB=0.938192;SGB=53.6492;VDB=0.348694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.10:16780956 chr10:016780956 0 W/16780956-16780956 FN3395-S SNP G -> A AC=1;AN=184;BQB=0.982419;DP=2638;DP4=1073,1304,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000379075;MQB=9.26525e-10;MQSB=0.0654968;RPB=0.769563;SGB=30.8405;VDB=0.854484;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.10:16782870 chr10:016782870 0 W/16782870-16782870 FN-283 Single Base Substitution G-A INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN2620-S.SNP.10:16787454 chr10:016787454 0 W/16787454-16787454 FN2620-S SNP C -> G AC=1;AN=198;BQB=0.541137;DP=3609;DP4=1409,1842,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00788e-09;MQSB=0.0896468;RPB=0.728965;SGB=95.5;VDB=0.0300386;EFF=INTERGENIC(MODIFIER||||||||||1) FN4312-S.SNP.10:16791207 chr10:016791207 0 W/16791207-16791207 FN4312-S SNP A -> T AC=1;AN=170;BQB=0.948805;DP=2503;DP4=1173,1274,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.50638e-08;MQSB=0.911415;RPB=0.775605;SGB=38.3207;VDB=0.91409;EFF=INTRON(MODIFIER||||1476|LOC_Os10g31970|protein_coding|CODING|LOC_Os10g31970.1|7|1) FN4080-S.SNP.10:16800993 chr10:016800993 0 W/16800993-16800993 FN4080-S SNP A -> T AC=1;AN=182;BQB=0.914028;DP=3096;DP4=1527,1503,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.88065e-07;MQSB=0.998413;RPB=0.00433135;SGB=28.6061;VDB=0.000564336;EFF=UTR_3_PRIME(MODIFIER||105||1476|LOC_Os10g31970|protein_coding|CODING|LOC_Os10g31970.1|26|1) FN3716-S.SNP.10:16801515 chr10:016801515 0 W/16801515-16801515 FN3716-S SNP T -> C AC=1;AN=190;BQB=0.878711;DP=2894;DP4=1527,1231,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11241e-08;MQSB=0.704815;RPB=0.869144;SGB=39.6545;VDB=0.0154701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T645A|654|LOC_Os10g31980|protein_coding|CODING|LOC_Os10g31980.1|3|1) FN3452-S.SNP.10:16806685 chr10:016806685 0 W/16806685-16806685 FN3452-S SNP A -> T AC=2;AN=184;BQB=0.980833;DP=2802;DP4=1228,1453,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.70027e-12;MQSB=0.954274;RPB=0.990651;SGB=98.4821;VDB=0.644697;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I1252N|1517|LOC_Os10g31990|protein_coding|CODING|LOC_Os10g31990.1|4|1) FN_829-2-5.SNP.10:16817823 chr10:016817823 0 W/16817823-16817823 FN_829-2-5 Single Base Substitution C-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN3820-S.SNP.10:16820132 chr10:016820132 0 W/16820132-16820132 FN3820-S SNP C -> G AC=1;AN=190;BQB=0.996752;DP=2801;DP4=1408,1305,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47951e-07;MQSB=0.877067;RPB=0.956926;SGB=44.5415;VDB=0.567998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H193Q|248|LOC_Os10g32010|protein_coding|CODING|LOC_Os10g32010.1|1|1) FN441-S.SNP.10:16824652 chr10:016824652 0 W/16824652-16824652 FN441-S Single Base Substitution T-A INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN441-S.SNP.10:16824653 chr10:016824653 0 W/16824653-16824653 FN441-S Single Base Substitution G-T INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3510-S.SNP.10:16829641 chr10:016829641 0 W/16829641-16829641 FN3510-S SNP C -> A AC=1;AN=188;BQB=0.965424;DP=2859;DP4=1459,1325,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22642e-05;MQSB=0.980484;RPB=0.807585;SGB=30.8063;VDB=0.55693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cTa|R590L|1573|LOC_Os10g32030|protein_coding|CODING|LOC_Os10g32030.1|1|1) FN2279-S.SNP.10:16833793 chr10:016833793 0 W/16833793-16833793 FN2279-S SNP A -> C AC=1;AN=190;BQB=0.676597;DP=4785;DP4=2366,2168,23,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.42388e-17;MQSB=0.989007;RPB=0.421112;SGB=30.527;VDB=0.411525;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.10:16836606 chr10:016836606 0 W/16836606-16836606 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.91092;DP=4770;DP4=2041,2398,7,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84187e-06;MQSB=0.904005;RPB=0.918741;SGB=22.2439;VDB=0.373295;EFF=UTR_5_PRIME(MODIFIER||3||194|LOC_Os10g32050|protein_coding|CODING|LOC_Os10g32050.1|1|1) FN2582-S.SNP.10:16839702 chr10:016839702 0 W/16839702-16839702 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.948201;DP=4421;DP4=1795,2220,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.86084e-06;MQSB=0.892036;RPB=0.958876;SGB=-15.026;VDB=0.8517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3893-S.SNP.10:16839702 chr10:016839702 0 W/16839702-16839702 FN3893-S SNP G -> A AC=2;AN=158;BQB=0.405656;DP=2672;DP4=1106,1386,28,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.71771e-14;MQSB=0.224376;RPB=0.913421;SGB=30.8446;VDB=0.746087;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.10:16841109 chr10:016841109 0 W/16841109-16841109 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.958734;DP=2625;DP4=1233,1312,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.08111e-10;MQSB=0.980917;RPB=0.709361;SGB=65.6427;VDB=0.345082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R11K|323|LOC_Os10g32060|protein_coding|CODING|LOC_Os10g32060.1|2|1) FN-121.SNP.10:16841876 chr10:016841876 0 W/16841876-16841876 FN-121 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g32060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN2550-S.SNP.10:16843608 chr10:016843608 0 W/16843608-16843608 FN2550-S SNP G -> A AC=1;AN=198;BQB=0.96229;DP=4808;DP4=2123,2484,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000272649;MQSB=0.977387;RPB=0.517241;SGB=18.5788;VDB=0.471462;EFF=INTRON(MODIFIER||||323|LOC_Os10g32060|protein_coding|CODING|LOC_Os10g32060.1|6|1) FN2275-S.SNP.10:16849900 chr10:016849900 0 W/16849900-16849900 FN2275-S SNP C -> T AC=1;AN=190;BQB=0.518001;DP=5316;DP4=2248,2608,27,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5381e-24;MQSB=0.842944;RPB=0.997654;SGB=-49.7081;VDB=0.301299;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.10:16858722 chr10:016858722 0 W/16858722-16858722 FN915-S Single Base Substitution C-G INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3780-S.SNP.10:16863813 chr10:016863813 0 W/16863813-16863813 FN3780-S SNP A -> T AC=1;AN=190;BQB=0.989361;DP=2111;DP4=1145,882,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000220378;MQSB=0.994486;RPB=0.981031;SGB=21.7749;VDB=0.660869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.10:16864567 chr10:016864567 0 W/16864567-16864567 FN2403 SNP A -> T AC=1;AN=200;BQB=0.843712;DP=4836;DP4=2158,2333,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.07556e-10;MQSB=0.927388;RPB=0.72384;SGB=43.8747;VDB=0.866121;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.10:16866361 chr10:016866361 0 W/16866361-16866361 FN-190 Single Base Substitution A-T INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1680-S.SNP.10:16866461 chr10:016866461 0 W/16866461-16866461 FN1680-S SNP G -> T AC=2;AN=188;BQB=0.146463;DP=3462;DP4=1223,2176,21,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.55575e-23;MQSB=0.978792;RPB=0.353798;SGB=-51.9791;VDB=0.889532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3731-S.SNP.10:16866769 chr10:016866769 0 W/16866769-16866769 FN3731-S SNP T -> A AC=2;AN=190;BQB=0.86006;DP=2352;DP4=838,1354,7,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.5961e-08;MQSB=0.710011;RPB=0.858304;SGB=53.8699;VDB=0.3436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.10:16870480 chr10:016870480 0 W/16870480-16870480 FN2655-S SNP G -> A AC=1;AN=200;BQB=0.971518;DP=3982;DP4=1770,1937,9,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03218e-16;MQSB=0.886591;RPB=0.700417;SGB=83.5316;VDB=0.117548;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.10:16876206 chr10:016876206 0 W/16876206-16876206 FN414-S Single Base Substitution G-A INTRON HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1025-S.SNP.10:16882862 chr10:016882862 0 W/16882862-16882862 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN477-S.SNP.10:16887120 chr10:016887120 0 W/16887120-16887120 FN477-S Single Base Substitution C-G INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2584-S.SNP.10:16890741 chr10:016890741 0 W/16890741-16890741 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.779884;DP=4082;DP4=2216,1664,17,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.51003e-17;MQSB=0.195037;RPB=0.999939;SGB=101.266;VDB=0.406043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G10D|609|LOC_Os10g32150|protein_coding|CODING|LOC_Os10g32150.1|1|1) FN1613-S.SNP.10:16900351 chr10:016900351 0 W/16900351-16900351 FN1613-S Single Base Substitution C-G INTERGENIC HET SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN1400-S.SNP.10:16911998 chr10:016911998 0 W/16911998-16911998 FN1400-S Single Base Substitution C-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN-196.SNP.10:16912438 chr10:016912438 0 W/16912438-16912438 FN-196 Single Base Substitution G-A INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN1509-S.SNP.10:16914303 chr10:016914303 0 W/16914303-16914303 FN1509-S Single Base Substitution T-C INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN825-S.SNP.10:16915838 chr10:016915838 0 W/16915838-16915838 FN825-S Single Base Substitution C-T INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN825-S.SNP.10:16915839 chr10:016915839 0 W/16915839-16915839 FN825-S Single Base Substitution A-G INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2332.SNP.10:16917029 chr10:016917029 0 W/16917029-16917029 FN2332 SNP C -> T AC=1;AN=192;BQB=0.489327;DP=4849;DP4=2549,2047,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.77176e-14;MQSB=0.969722;RPB=0.685355;SGB=86.1165;VDB=0.812858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.10:16921161 chr10:016921161 0 W/16921161-16921161 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.913147;DP=2560;DP4=1269,1164,19,17;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.0015625;MQB=3.6498e-14;MQSB=0.297302;RPB=0.0980329;SGB=151.934;VDB=0.946027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.10:16923342 chr10:016923342 0 W/16923342-16923342 FN2752-S SNP G -> A AC=2;AN=200;BQB=0.410078;DP=4391;DP4=2017,2150,12,8;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000683216;MQB=9.77317e-09;MQSB=0.183047;RPB=0.996579;SGB=61.9006;VDB=0.907995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.10:16926941 chr10:016926941 0 W/16926941-16926941 FN2196-S SNP G -> A AC=2;AN=190;BQB=0.0285319;DP=2557;DP4=927,1390,14,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.71762e-10;MQSB=0.999364;RPB=0.448201;SGB=103.624;VDB=0.161819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G13E|443|LOC_Os10g32240|protein_coding|CODING|LOC_Os10g32240.1|1|1) FN3524-S.SNP.10:16927488 chr10:016927488 0 W/16927488-16927488 FN3524-S SNP C -> T AC=2;AN=188;BQB=0.989282;DP=3150;DP4=1560,1502,23,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.06268e-18;MQSB=0.728327;RPB=0.127063;SGB=139.845;VDB=0.660442;EFF=INTRON(MODIFIER||||443|LOC_Os10g32240|protein_coding|CODING|LOC_Os10g32240.1|1|1) FN859-S.SNP.10:16932419 chr10:016932419 0 W/16932419-16932419 FN859-S Single Base Substitution A-T INTERGENIC HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1086-S.SNP.10:16935003 chr10:016935003 0 W/16935003-16935003 FN1086-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g32260 retrotransposon protein, putative, unclassified, expressed SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2752-S.SNP.10:16936883 chr10:016936883 0 W/16936883-16936883 FN2752-S SNP C -> A AC=1;AN=200;BQB=0.982033;DP=3334;DP4=859,2163,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.21554e-10;MQSB=0.885103;RPB=0.367485;SGB=54.6902;VDB=0.841004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.10:16940611 chr10:016940611 0 W/16940611-16940611 FN3794-S SNP A -> G AC=1;AN=190;BQB=0.457799;DP=2364;DP4=1137,1128,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00253807;MQB=0.000267322;MQSB=0.973794;RPB=0.862498;SGB=49.0954;VDB=0.598947;EFF=INTRON(MODIFIER||||307|LOC_Os10g32270|protein_coding|CODING|LOC_Os10g32270.1|1|1) FN1104-S.SNP.10:16948578 chr10:016948578 0 W/16948578-16948578 FN1104-S Single Base Substitution T-A INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1104-S.SNP.10:16948580 chr10:016948580 0 W/16948580-16948580 FN1104-S Single Base Substitution C-A INTERGENIC HOMO SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3511-S.SNP.10:16950502 chr10:016950502 0 W/16950502-16950502 FN3511-S SNP C -> T AC=2;AN=188;BQB=0.151968;DP=2599;DP4=1328,1192,13,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.95758e-08;MQSB=0.848663;RPB=0.771179;SGB=60.7873;VDB=0.836469;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.10:16951514 chr10:016951514 0 W/16951514-16951514 FN4107-S SNP T -> A AC=2;AN=182;BQB=0.356957;DP=2986;DP4=1281,1587,8,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.38754e-06;MQSB=0.836339;RPB=0.0995611;SGB=75.6874;VDB=0.288302;EFF=INTRON(MODIFIER||||364|LOC_Os10g32300|protein_coding|CODING|LOC_Os10g32300.1|5|1) FN3552-S.SNP.10:16970847 chr10:016970847 0 W/16970847-16970847 FN3552-S SNP G -> A AC=2;AN=188;BQB=0.970824;DP=3242;DP4=1733,1397,15,11;HOB=0.0210502;ICB=0.494738;MQ=18;MQ0F=0.407465;MQB=0.32052;MQSB=1.27608e-27;RPB=0.244468;SGB=112.585;VDB=0.938098;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.10:16995701 chr10:016995701 0 W/16995701-16995701 FN821-S Single Base Substitution C-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN2568-S.SNP.10:16998569 chr10:016998569 0 W/16998569-16998569 FN2568-S SNP A -> G AC=1;AN=198;BQB=0.336567;DP=1735;DP4=448,675,2,12;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000576369;MQB=0.00259988;MQSB=0.00445296;RPB=0.00931868;SGB=-89.9814;VDB=0.347065;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.10:16999656 chr10:016999656 0 W/16999656-16999656 FN_N1-116-1 Single Base Substitution A-C Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1429-S.SNP.10:17006436 chr10:017006436 0 W/17006436-17006436 FN1429-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g32444 expressed protein SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1152-S.SNP.10:17013900 chr10:017013900 0 W/17013900-17013900 FN1152-S Single Base Substitution G-T INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN3950-S.SNP.10:17014807 chr10:017014807 0 W/17014807-17014807 FN3950-S SNP A -> G AC=1;AN=168;BQB=0.856693;DP=2533;DP4=1278,1135,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05288e-10;MQSB=0.979901;RPB=0.180665;SGB=11.3448;VDB=0.854978;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.10:17016467 chr10:017016467 0 W/17016467-17016467 FN793-S Single Base Substitution C-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN793-S.SNP.10:17016468 chr10:017016468 0 W/17016468-17016468 FN793-S Single Base Substitution G-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1366-S.SNP.10:17017664 chr10:017017664 0 W/17017664-17017664 FN1366-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN2353.SNP.10:17026706 chr10:017026706 0 W/17026706-17026706 FN2353 SNP G -> C AC=2;AN=192;BQB=0.504469;DP=4896;DP4=2279,2340,24,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.07669e-26;MQSB=0.858009;RPB=0.552878;SGB=4.98351;VDB=0.0927095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.10:17026749 chr10:017026749 0 W/17026749-17026749 FN3845-S SNP T -> C AC=1;AN=190;BQB=0.41283;DP=2571;DP4=1172,1333,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000141611;MQSB=0.998416;RPB=0.983699;SGB=25.439;VDB=0.979237;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.10:17033949 chr10:017033949 0 W/17033949-17033949 FN1024-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN-380.SNP.10:17037626 chr10:017037626 0 W/17037626-17037626 FN-380 Single Base Substitution T-C INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3807-S.SNP.10:17038734 chr10:017038734 0 W/17038734-17038734 FN3807-S SNP T -> C AC=1;AN=190;BQB=0.912091;DP=2885;DP4=1374,1401,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27806e-09;MQSB=0.961539;RPB=0.945151;SGB=71.8647;VDB=0.933157;EFF=INTERGENIC(MODIFIER||||||||||1) FN539-S.SNP.10:17038778 chr10:017038778 0 W/17038778-17038778 FN539-S Single Base Substitution T-A INTERGENIC HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN3323-S.SNP.10:17039603 chr10:017039603 0 W/17039603-17039603 FN3323-S SNP G -> T AC=1;AN=184;BQB=0.994191;DP=3043;DP4=923,1974,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.16984e-05;MQSB=0.835791;RPB=0.802428;SGB=-3.85014;VDB=0.964429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.10:17045782 chr10:017045782 0 W/17045782-17045782 FN2366 SNP C -> A AC=2;AN=192;BQB=0.96777;DP=5291;DP4=2332,2606,21,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.34095e-26;MQSB=0.928293;RPB=0.887016;SGB=55.8496;VDB=0.415328;EFF=INTRON(MODIFIER||||898|LOC_Os10g32540|protein_coding|CODING|LOC_Os10g32540.1|10|1) FN3717-S.SNP.10:17047225 chr10:017047225 0 W/17047225-17047225 FN3717-S SNP T -> C AC=2;AN=190;BQB=0.997212;DP=2633;DP4=1159,1386,4,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.69525e-09;MQSB=0.961544;RPB=0.999579;SGB=39.6545;VDB=0.997108;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V879A|898|LOC_Os10g32540|protein_coding|CODING|LOC_Os10g32540.1|13|1) FN2249-S.SNP.10:17052388 chr10:017052388 0 W/17052388-17052388 FN2249-S SNP C -> T AC=1;AN=190;BQB=0.993989;DP=5302;DP4=2560,2384,18,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08931e-15;MQSB=0.99889;RPB=0.770282;SGB=-42.5702;VDB=0.4133;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L510F|634|LOC_Os10g32550|protein_coding|CODING|LOC_Os10g32550.1|15|1) FN4137-S.SNP.10:17052542 chr10:017052542 0 W/17052542-17052542 FN4137-S SNP G -> A AC=2;AN=170;BQB=0.985823;DP=2613;DP4=1328,1234,2,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.66703e-09;MQSB=0.998095;RPB=0.979022;SGB=56.7575;VDB=0.802783;EFF=INTRON(MODIFIER||||634|LOC_Os10g32550|protein_coding|CODING|LOC_Os10g32550.1|15|1) FN2713-S.SNP.10:17053760 chr10:017053760 0 W/17053760-17053760 FN2713-S SNP C -> T AC=2;AN=200;BQB=0.835291;DP=4970;DP4=2402,2230,23,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000402414;MQB=1.70928e-27;MQSB=0.986914;RPB=0.982415;SGB=195.292;VDB=0.573958;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.10:17053760 chr10:017053760 0 W/17053760-17053760 FN4119-S SNP C -> T AC=2;AN=182;BQB=0.989177;DP=2703;DP4=1223,1397,8,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.000369959;MQB=4.55493e-11;MQSB=0.890018;RPB=0.999344;SGB=84.7091;VDB=0.260787;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.10:17064628 chr10:017064628 0 W/17064628-17064628 FN3938-S SNP G -> A AC=1;AN=158;BQB=0.692516;DP=2506;DP4=1153,1262,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.72761e-06;MQSB=0.98629;RPB=0.780585;SGB=42.6978;VDB=0.79976;EFF=INTRON(MODIFIER||||491|LOC_Os10g32570|protein_coding|CODING|LOC_Os10g32570.1|3|1) FN773-S.SNP.10:17067404 chr10:017067404 0 W/17067404-17067404 FN773-S Single Base Substitution G-T INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN505-S.SNP.10:17072542 chr10:017072542 0 W/17072542-17072542 FN505-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN4099-S.SNP.10:17072859 chr10:017072859 0 W/17072859-17072859 FN4099-S SNP G -> A AC=2;AN=182;BQB=0.996817;DP=3210;DP4=1735,1383,14,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.31183e-13;MQSB=0.975928;RPB=0.759822;SGB=84.7091;VDB=0.175312;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.10:17097609 chr10:017097609 0 W/17097609-17097609 FN-208 Single Base Substitution G-A STOP_GAINED HET LOC_Os10g32640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3285-S.SNP.10:17098625 chr10:017098625 0 W/17098625-17098625 FN3285-S SNP A -> T AC=1;AN=184;BQB=0.768615;DP=3051;DP4=1458,1496,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00163881;MQB=0.000523253;MQSB=0.752705;RPB=0.953958;SGB=25.1826;VDB=0.992758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.10:17102502 chr10:017102502 0 W/17102502-17102502 FN3811-S SNP G -> T AC=1;AN=190;BQB=0.820511;DP=3212;DP4=1586,1546,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000622665;MQB=3.24449e-07;MQSB=0.914515;RPB=0.39881;SGB=21.1058;VDB=0.650373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L945I|1291|LOC_Os10g32649|protein_coding|CODING|LOC_Os10g32649.1|2|1) FN1582-S.SNP.10:17103332 chr10:017103332 0 W/17103332-17103332 FN1582-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g32649 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN4094-S.SNP.10:17103356 chr10:017103356 0 W/17103356-17103356 FN4094-S SNP G -> T AC=2;AN=182;BQB=0.965816;DP=2914;DP4=1398,1456,8,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.10396e-14;MQSB=0.943078;RPB=0.967654;SGB=98.2417;VDB=0.651839;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S660*|1291|LOC_Os10g32649|protein_coding|CODING|LOC_Os10g32649.1|2|1);LOF=(LOC_Os10g32649|LOC_Os10g32649|1|1.00);NMD=(LOC_Os10g32649|LOC_Os10g32649|1|1.00) FN995-S.SNP.10:17105322 chr10:017105322 0 W/17105322-17105322 FN995-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g32649 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN4095-S.SNP.10:17105586 chr10:017105586 0 W/17105586-17105586 FN4095-S SNP A -> T AC=2;AN=182;BQB=0.963975;DP=3205;DP4=1762,1263,17,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.84856e-16;MQSB=0.952223;RPB=0.688607;SGB=68.3396;VDB=0.0127941;EFF=UTR_3_PRIME(MODIFIER||51||308|LOC_Os10g32658|protein_coding|CODING|LOC_Os10g32658.1|1|1) FN798-S.SNP.10:17106607 chr10:017106607 0 W/17106607-17106607 FN798-S Single Base Substitution A-T INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2330.SNP.10:17109214 chr10:017109214 0 W/17109214-17109214 FN2330 SNP A -> G AC=1;AN=192;BQB=0.645354;DP=5141;DP4=2436,2251,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194515;MQB=5.77571e-11;MQSB=0.834051;RPB=0.997808;SGB=68.2948;VDB=0.219159;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.10:17109527 chr10:017109527 0 W/17109527-17109527 FN786-S Single Base Substitution G-A INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN1614-S.SNP.10:17113025 chr10:017113025 0 W/17113025-17113025 FN1614-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os10g32680 expressed protein SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1466-S.SNP.10:17118894 chr10:017118894 0 W/17118894-17118894 FN1466-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3698-S.SNP.10:17127897 chr10:017127897 0 W/17127897-17127897 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.931852;DP=3097;DP4=1400,1538,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47469e-10;MQSB=0.899449;RPB=0.995069;SGB=62.7569;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.10:17129265 chr10:017129265 0 W/17129265-17129265 FN1412-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN526-S.SNP.10:17134166 chr10:017134166 0 W/17134166-17134166 FN526-S Single Base Substitution G-A STOP_GAINED HET LOC_Os10g32730 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1402-S.SNP.10:17147353 chr10:017147353 0 W/17147353-17147353 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2283.SNP.10:17150024 chr10:017150024 0 W/17150024-17150024 FN2283 SNP C -> T AC=1;AN=192;BQB=0.892589;DP=4592;DP4=2001,2275,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021777;MQB=7.37124e-14;MQSB=0.543065;RPB=0.965826;SGB=16.7409;VDB=0.346881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.10:17150265 chr10:017150265 0 W/17150265-17150265 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.999947;DP=2709;DP4=1426,1179,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54425e-09;MQSB=0.338002;RPB=0.118764;SGB=71.3514;VDB=0.118857;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.10:17154489 chr10:017154489 0 W/17154489-17154489 FN728-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g32750 zinc finger family protein, putative, expressed SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN1152-S.SNP.10:17156320 chr10:017156320 0 W/17156320-17156320 FN1152-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g32760 zinc finger family protein, putative, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN4172-S.SNP.10:17169413 chr10:017169413 0 W/17169413-17169413 FN4172-S SNP A -> C AC=2;AN=170;BQB=0.949368;DP=1380;DP4=1111,238,8,1;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.25095e-06;MQSB=0.965678;RPB=0.994379;SGB=34.5445;VDB=0.588772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atT/atG|I171M|222|LOC_Os10g32790|protein_coding|CODING|LOC_Os10g32790.1|2|1) FN3632-S.SNP.10:17171143 chr10:017171143 0 W/17171143-17171143 FN3632-S SNP C -> T AC=1;AN=190;BQB=0.408241;DP=1934;DP4=868,967,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00457479;MQSB=0.950508;RPB=0.963011;SGB=21.8853;VDB=0.326267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R41H|222|LOC_Os10g32790|protein_coding|CODING|LOC_Os10g32790.1|1|1) FN3824-S.SNP.10:17175537 chr10:017175537 0 W/17175537-17175537 FN3824-S SNP G -> T AC=1;AN=190;BQB=0.990056;DP=2457;DP4=1186,1161,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15428e-10;MQSB=0.822798;RPB=0.99392;SGB=64.5316;VDB=0.158657;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.10:17176220 chr10:017176220 0 W/17176220-17176220 FN517-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g32800 expressed protein SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN1438-S.SNP.10:17176694 chr10:017176694 0 W/17176694-17176694 FN1438-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g32800 expressed protein SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN276-S.SNP.10:17182502 chr10:017182502 0 W/17182502-17182502 FN276-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 273, Mutant_ID: FN276-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN358-S.SNP.10:17196022 chr10:017196022 0 W/17196022-17196022 FN358-S Single Base Substitution T-A INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2381.SNP.10:17209952 chr10:017209952 0 W/17209952-17209952 FN2381 SNP A -> T AC=1;AN=192;BQB=0.969703;DP=4756;DP4=2220,2242,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.60731e-09;MQSB=0.810736;RPB=0.988524;SGB=58.3392;VDB=0.557167;EFF=INTRON(MODIFIER||||497|LOC_Os10g32880|protein_coding|CODING|LOC_Os10g32880.1|1|1) W276-2-1.SNP.10:17212606 chr10:017212606 0 W/17212606-17212606 W276-2-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-219.SNP.10:17215166 chr10:017215166 0 W/17215166-17215166 FN-219 Single Base Substitution C-A INTERGENIC HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN4160-S.SNP.10:17218773 chr10:017218773 0 W/17218773-17218773 FN4160-S SNP T -> C AC=1;AN=170;BQB=0.816415;DP=2474;DP4=933,1472,10,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.87972e-08;MQSB=0.880692;RPB=0.795236;SGB=65.6427;VDB=0.677165;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.10:17221464 chr10:017221464 0 W/17221464-17221464 FN1723-S SNP T -> C AC=1;AN=188;BQB=0.00198613;DP=3904;DP4=1703,2148,17,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.02981e-09;MQSB=0.993435;RPB=0.176215;SGB=-249.159;VDB=0.431237;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.10:17231085 chr10:017231085 0 W/17231085-17231085 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.98939;DP=2934;DP4=1491,1350,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17657e-06;MQSB=0.999904;RPB=0.234771;SGB=35.4339;VDB=0.133454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.10:17237657 chr10:017237657 0 W/17237657-17237657 FN2364 SNP C -> T AC=1;AN=192;BQB=0.999306;DP=4726;DP4=2184,2279,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.54707e-08;MQSB=0.987858;RPB=0.91837;SGB=32.6514;VDB=0.896381;EFF=INTERGENIC(MODIFIER||||||||||1) FN1195-S.SNP.10:17238789 chr10:017238789 0 W/17238789-17238789 FN1195-S Single Base Substitution T-A INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1735-S.SNP.10:17239467 chr10:017239467 0 W/17239467-17239467 FN1735-S SNP T -> C AC=1;AN=188;BQB=0.172472;DP=3521;DP4=1569,1916,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.61122e-05;MQSB=0.646247;RPB=0.931166;SGB=-35.5377;VDB=0.865484;EFF=INTERGENIC(MODIFIER||||||||||1) FN1443-S.SNP.10:17240761 chr10:017240761 0 W/17240761-17240761 FN1443-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. W577-3-1.SNP.10:17241297 chr10:017241297 0 W/17241297-17241297 W577-3-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN1057-S.SNP.10:17242628 chr10:017242628 0 W/17242628-17242628 FN1057-S Single Base Substitution A-G INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN-187.SNP.10:17242991 chr10:017242991 0 W/17242991-17242991 FN-187 Single Base Substitution C-G INTERGENIC HOMO SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3864-S.SNP.10:17243001 chr10:017243001 0 W/17243001-17243001 FN3864-S SNP A -> T AC=2;AN=158;BQB=0.997729;DP=2138;DP4=985,910,21,15;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.39901e-14;MQSB=0.888615;RPB=0.590909;SGB=36.543;VDB=0.533576;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.10:17247055 chr10:017247055 0 W/17247055-17247055 FN813-S Single Base Substitution C-A INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN980-S.SNP.10:17257839 chr10:017257839 0 W/17257839-17257839 FN980-S Single Base Substitution C-T INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1135-S.SNP.10:17265405 chr10:017265405 0 W/17265405-17265405 FN1135-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g32980 CESA7 - cellulose synthase, expressed SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN3547-S.SNP.10:17269984 chr10:017269984 0 W/17269984-17269984 FN3547-S SNP G -> A AC=1;AN=188;BQB=0.921233;DP=3383;DP4=1567,1702,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.48169e-09;MQSB=0.935669;RPB=0.604387;SGB=31.1628;VDB=0.252792;EFF=INTRON(MODIFIER||||1090|LOC_Os10g32990|protein_coding|CODING|LOC_Os10g32990.1|1|1) FN2295.SNP.10:17277107 chr10:017277107 0 W/17277107-17277107 FN2295 SNP A -> T AC=1;AN=192;BQB=0.995755;DP=4585;DP4=2112,2110,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.04156e-16;MQSB=0.791465;RPB=0.0208459;SGB=-6.8678;VDB=0.0213614;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I55F|700|LOC_Os10g33000|protein_coding|CODING|LOC_Os10g33000.1|1|1) FN684-S.SNP.10:17280677 chr10:017280677 0 W/17280677-17280677 FN684-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN1464-S.SNP.10:17288445 chr10:017288445 0 W/17288445-17288445 FN1464-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN1120-S.SNP.10:17289514 chr10:017289514 0 W/17289514-17289514 FN1120-S Single Base Substitution C-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1120-S.SNP.10:17289515 chr10:017289515 0 W/17289515-17289515 FN1120-S Single Base Substitution A-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN899-S.SNP.10:17292057 chr10:017292057 0 W/17292057-17292057 FN899-S Single Base Substitution T-C INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN485-S.SNP.10:17293220 chr10:017293220 0 W/17293220-17293220 FN485-S Single Base Substitution C-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3398-S.SNP.10:17294987 chr10:017294987 0 W/17294987-17294987 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.905745;DP=3307;DP4=1717,1517,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.248866;MQB=0.425142;MQSB=9.50453e-24;RPB=0.974618;SGB=66.8296;VDB=0.822283;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.10:17301510 chr10:017301510 0 W/17301510-17301510 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.413295;DP=3413;DP4=1968,1375,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000174057;MQSB=0.927326;RPB=0.942444;SGB=25.1826;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.10:17308526 chr10:017308526 0 W/17308526-17308526 FN4030-S SNP T -> A AC=1;AN=168;BQB=0.602662;DP=2634;DP4=1104,1417,1,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.52085e-05;MQSB=0.999981;RPB=0.864571;SGB=34.748;VDB=0.085717;EFF=INTERGENIC(MODIFIER||||||||||1) FN1658-S.SNP.10:17308774 chr10:017308774 0 W/17308774-17308774 FN1658-S SNP G -> A AC=1;AN=188;BQB=0.125885;DP=3137;DP4=1364,1736,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.33401e-07;MQSB=0.838636;RPB=0.899329;SGB=-14.9998;VDB=0.353465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.10:17312247 chr10:017312247 0 W/17312247-17312247 FN2198-S SNP T -> A AC=2;AN=190;BQB=0.977387;DP=2686;DP4=834,1339,1,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.49341e-09;MQSB=0.166559;RPB=0.227191;SGB=10.3266;VDB=0.244135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.10:17312248 chr10:017312248 0 W/17312248-17312248 FN2198-S SNP C -> A AC=2;AN=190;BQB=0.760898;DP=2705;DP4=943,1573,1,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.82258e-07;MQSB=0.0448194;RPB=0.266134;SGB=58.2031;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.10:17322782 chr10:017322782 0 W/17322782-17322782 FN-168 Single Base Substitution T-C INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1380-S.SNP.10:17340409 chr10:017340409 0 W/17340409-17340409 FN1380-S Single Base Substitution G-A INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN-185.SNP.10:17343288 chr10:017343288 0 W/17343288-17343288 FN-185 Single Base Substitution A-T INTERGENIC HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN711-S.SNP.10:17345168 chr10:017345168 0 W/17345168-17345168 FN711-S Single Base Substitution A-G INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2572-S.SNP.10:17351029 chr10:017351029 0 W/17351029-17351029 FN2572-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3455-S.SNP.10:17356392 chr10:017356392 0 W/17356392-17356392 FN3455-S SNP A -> G AC=1;AN=184;BQB=0.758788;DP=3150;DP4=1855,1185,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.42927e-07;MQSB=0.999675;RPB=0.998227;SGB=42.7914;VDB=0.82849;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.10:17364193 chr10:017364193 0 W/17364193-17364193 FN3928-S SNP A -> G AC=2;AN=158;BQB=0.935843;DP=2331;DP4=1115,1119,9,12;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=4.77536e-08;MQSB=2.4702e-05;RPB=0.702549;SGB=61.029;VDB=0.475054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.10:17369703 chr10:017369703 0 W/17369703-17369703 FN1297-S Single Base Substitution T-A INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1263-S.SNP.10:17396598 chr10:017396598 0 W/17396598-17396598 FN1263-S Single Base Substitution G-A INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1721-S.SNP.10:17396598 chr10:017396598 0 W/17396598-17396598 FN1721-S SNP G -> A AC=2;AN=188;BQB=0.999368;DP=3258;DP4=1763,1425,34,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000306937;MQB=7.26782e-26;MQSB=0.977378;RPB=0.974247;SGB=11.2171;VDB=0.926421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.10:17398030 chr10:017398030 0 W/17398030-17398030 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.758946;DP=4640;DP4=1954,2244,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.39489e-12;MQSB=0.261553;RPB=0.827903;SGB=39.9056;VDB=0.33455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.10:17398031 chr10:017398031 0 W/17398031-17398031 FN2678-S SNP A -> G AC=1;AN=200;BQB=0.779951;DP=4656;DP4=2016,2293,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9429e-12;MQSB=0.298028;RPB=0.536385;SGB=-10.0844;VDB=0.552144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:17399066 chr10:017399066 0 W/17399066-17399066 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.770527;DP=4374;DP4=2092,1959,22,21;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.66243e-16;MQSB=0.568207;RPB=0.985961;SGB=96.8175;VDB=0.92487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.10:17399066 chr10:017399066 0 W/17399066-17399066 FN2572-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN2608-S.SNP.10:17399453 chr10:017399453 0 W/17399453-17399453 FN2608-S SNP A -> T AC=1;AN=198;BQB=0.810945;DP=4132;DP4=2044,1853,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.3347e-09;MQSB=0.360211;RPB=0.870508;SGB=26.7492;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.10:17400609 chr10:017400609 0 W/17400609-17400609 FN914-S Single Base Substitution T-C INTRON HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-345.SNP.10:17406863 chr10:017406863 0 W/17406863-17406863 FN-345 Single Base Substitution G-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-345.SNP.10:17406864 chr10:017406864 0 W/17406864-17406864 FN-345 Single Base Substitution G-T INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2274-S.SNP.10:17421836 chr10:017421836 0 W/17421836-17421836 FN2274-S SNP T -> C AC=1;AN=190;BQB=0.511208;DP=4551;DP4=2083,2102,19,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.08987e-16;MQSB=0.021621;RPB=0.668667;SGB=110.732;VDB=0.617151;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.10:17431236 chr10:017431236 0 W/17431236-17431236 FN400-S Single Base Substitution C-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN3366-S.SNP.10:17432807 chr10:017432807 0 W/17432807-17432807 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.990144;DP=2567;DP4=1220,1225,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07508e-07;MQSB=0.984824;RPB=0.894584;SGB=23.2751;VDB=0.354724;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E446G|464|LOC_Os10g33230|protein_coding|CODING|LOC_Os10g33230.1|2|1) FN1624-S.SNP.10:17432821 chr10:017432821 0 W/17432821-17432821 FN1624-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g33230 RNA recognition motif containing protein, putative, expressed SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1395-S.SNP.10:17434106 chr10:017434106 0 W/17434106-17434106 FN1395-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN-122.SNP.10:17434288 chr10:017434288 0 W/17434288-17434288 FN-122 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN4148-S.SNP.10:17434724 chr10:017434724 0 W/17434724-17434724 FN4148-S SNP C -> T AC=1;AN=170;BQB=0.995484;DP=2363;DP4=1174,1043,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.92192e-06;MQSB=0.984614;RPB=0.847355;SGB=43.4296;VDB=0.664159;EFF=UTR_3_PRIME(MODIFIER||1859||464|LOC_Os10g33230|protein_coding|CODING|LOC_Os10g33230.1|2|1) FN4148-S.SNP.10:17434745 chr10:017434745 0 W/17434745-17434745 FN4148-S SNP C -> T AC=1;AN=170;BQB=0.829271;DP=2418;DP4=1193,1125,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.18943e-07;MQSB=0.999982;RPB=0.989422;SGB=43.4296;VDB=0.319127;EFF=UTR_3_PRIME(MODIFIER||1880||464|LOC_Os10g33230|protein_coding|CODING|LOC_Os10g33230.1|2|1) FN4148-S.SNP.10:17434750 chr10:017434750 0 W/17434750-17434750 FN4148-S SNP C -> A AC=1;AN=170;BQB=0.998584;DP=2416;DP4=1183,1075,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.92321e-07;MQSB=0.980798;RPB=0.993109;SGB=38.987;VDB=0.0870998;EFF=UTR_3_PRIME(MODIFIER||1885||464|LOC_Os10g33230|protein_coding|CODING|LOC_Os10g33230.1|2|1) FN3709-S.SNP.10:17440549 chr10:017440549 0 W/17440549-17440549 FN3709-S SNP C -> A AC=2;AN=190;BQB=0.472856;DP=1678;DP4=914,654,6,4;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0.00284052;MQSB=0.461958;RPB=0.903105;SGB=39.9877;VDB=0.730559;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T945K|983|LOC_Os10g33240|protein_coding|CODING|LOC_Os10g33240.1|4|1) FN-236.SNP.10:17445069 chr10:017445069 0 W/17445069-17445069 FN-236 Single Base Substitution T-A INTERGENIC HET SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN764-S.SNP.10:17451797 chr10:017451797 0 W/17451797-17451797 FN764-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g33250 WAX2, putative, expressed SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1554-37-38.SNP.10:17456578 chr10:017456578 0 W/17456578-17456578 FN1554-37-38 SNP C -> T AC=1;AN=190;BQB=0.75215;DP=3995;DP4=1964,1790,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000399843;MQSB=0.00044215;RPB=0.734676;SGB=18.552;VDB=0.988711;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.10:17461233 chr10:017461233 0 W/17461233-17461233 FN1448-S Single Base Substitution A-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. W500-4-7-1.SNP.10:17468158 chr10:017468158 0 W/17468158-17468158 W500-4-7-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN3924-S.SNP.10:17468262 chr10:017468262 0 W/17468262-17468262 FN3924-S SNP C -> T AC=1;AN=158;BQB=0.94569;DP=2568;DP4=1037,1354,7,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.66283e-10;MQSB=0.984068;RPB=0.790856;SGB=50.9207;VDB=0.939832;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.10:17475354 chr10:017475354 0 W/17475354-17475354 FN620-S Single Base Substitution T-C INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3551-S.SNP.10:17478417 chr10:017478417 0 W/17478417-17478417 FN3551-S SNP A -> T AC=2;AN=188;BQB=0.85734;DP=2865;DP4=1311,1460,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.48161e-13;MQSB=0.995574;RPB=0.972839;SGB=78.5038;VDB=0.161686;EFF=INTRON(MODIFIER||||1125|LOC_Os10g33275|protein_coding|CODING|LOC_Os10g33275.1|11|1),INTRON(MODIFIER||||902|LOC_Os10g33275|protein_coding|CODING|LOC_Os10g33275.2|10|1) FN3355-S.SNP.10:17479646 chr10:017479646 0 W/17479646-17479646 FN3355-S SNP C -> T AC=1;AN=184;BQB=0.930953;DP=2454;DP4=1229,1123,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.9046e-06;MQSB=0.986952;RPB=0.974267;SGB=13.188;VDB=0.113567;EFF=INTRON(MODIFIER||||1125|LOC_Os10g33275|protein_coding|CODING|LOC_Os10g33275.1|10|1),INTRON(MODIFIER||||902|LOC_Os10g33275|protein_coding|CODING|LOC_Os10g33275.2|9|1) FN1436-S.SNP.10:17480335 chr10:017480335 0 W/17480335-17480335 FN1436-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g33275 DEAD/DEAH box helicase domain containing protein, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3514-S.SNP.10:17487827 chr10:017487827 0 W/17487827-17487827 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.733458;DP=2675;DP4=1336,1281,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16063e-09;MQSB=0.990016;RPB=0.641817;SGB=50.1574;VDB=0.636116;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E486*|727|LOC_Os10g33290|protein_coding|CODING|LOC_Os10g33290.1|4|1),STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E486*|727|LOC_Os10g33290|protein_coding|CODING|LOC_Os10g33290.2|4|1);LOF=(LOC_Os10g33290|LOC_Os10g33290|2|1.00);NMD=(LOC_Os10g33290|LOC_Os10g33290|2|1.00) FN1326-S.SNP.10:17516789 chr10:017516789 0 W/17516789-17516789 FN1326-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN452-S.SNP.10:17516789 chr10:017516789 0 W/17516789-17516789 FN452-S Single Base Substitution G-T INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN-301.SNP.10:17517365 chr10:017517365 0 W/17517365-17517365 FN-301 Single Base Substitution G-A INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1707-S.SNP.10:17518125 chr10:017518125 0 W/17518125-17518125 FN1707-S SNP A -> G AC=1;AN=188;BQB=0.146491;DP=4006;DP4=2107,1852,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.00924e-07;MQSB=0.996092;RPB=0.998789;SGB=-37.8212;VDB=0.666961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-279.SNP.10:17518130 chr10:017518130 0 W/17518130-17518130 FN-279 Single Base Substitution C-T INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN_789-2-1.SNP.10:17526740 chr10:017526740 0 W/17526740-17526740 FN_789-2-1 Single Base Substitution C-T Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2594-S.SNP.10:17528231 chr10:017528231 0 W/17528231-17528231 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.985424;DP=4037;DP4=2060,1706,3,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.27949e-05;MQSB=0.99218;RPB=0.0953695;SGB=11.1786;VDB=0.3048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3711-S.SNP.10:17537714 chr10:017537714 0 W/17537714-17537714 FN3711-S SNP G -> A AC=1;AN=190;BQB=0.936318;DP=2138;DP4=1108,913,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000120599;MQSB=0.846237;RPB=0.597392;SGB=35.4339;VDB=0.18147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.10:17547220 chr10:017547220 0 W/17547220-17547220 FN1490-S Single Base Substitution G-T SYNONYMOUS_CODING Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN4108-S.SNP.10:17555059 chr10:017555059 0 W/17555059-17555059 FN4108-S SNP C -> T AC=1;AN=182;BQB=0.971033;DP=3042;DP4=1412,1550,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.76656e-06;MQSB=0.997737;RPB=0.824929;SGB=44.1115;VDB=0.882096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.10:17558421 chr10:017558421 0 W/17558421-17558421 FN2555-S SNP G -> A AC=2;AN=198;BQB=0.816611;DP=4062;DP4=1861,1981,21,17;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.43032e-22;MQSB=0.742068;RPB=0.201955;SGB=83.8419;VDB=0.262357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.10:17558732 chr10:017558732 0 W/17558732-17558732 FN4300-S SNP C -> A AC=1;AN=170;BQB=0.891034;DP=2378;DP4=1220,1104,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46514e-05;MQSB=0.996548;RPB=0.180652;SGB=38.987;VDB=0.682972;EFF=INTERGENIC(MODIFIER||||||||||1) FN977-S.SNP.10:17561372 chr10:017561372 0 W/17561372-17561372 FN977-S Single Base Substitution A-G INTERGENIC HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN500-S.SNP.10:17565810 chr10:017565810 0 W/17565810-17565810 FN500-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1320-S.SNP.10:17566145 chr10:017566145 0 W/17566145-17566145 FN1320-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3311-S.SNP.10:17568036 chr10:017568036 0 W/17568036-17568036 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.621395;DP=2797;DP4=1361,1340,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.46722e-06;MQSB=0.999216;RPB=0.983735;SGB=23.2751;VDB=0.260277;EFF=INTRON(MODIFIER||||465|LOC_Os10g33370|protein_coding|CODING|LOC_Os10g33370.1|2|1) FN3508-S.SNP.10:17568485 chr10:017568485 0 W/17568485-17568485 FN3508-S SNP C -> T AC=2;AN=188;BQB=0.662337;DP=2714;DP4=1333,1287,17,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.86213e-17;MQSB=0.9999;RPB=0.29513;SGB=96.2203;VDB=0.0990586;EFF=INTRON(MODIFIER||||465|LOC_Os10g33370|protein_coding|CODING|LOC_Os10g33370.1|2|1) FN1121-S.SNP.10:17570204 chr10:017570204 0 W/17570204-17570204 FN1121-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.10:17570776 chr10:017570776 0 W/17570776-17570776 FN1121-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g33370 3-ketoacyl-CoA synthase precursor, putative, expressed SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.10:17570777 chr10:017570777 0 W/17570777-17570777 FN1121-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2214-S.SNP.10:17571769 chr10:017571769 0 W/17571769-17571769 FN2214-S SNP C -> T AC=1;AN=190;BQB=0.950051;DP=4235;DP4=1828,2092,15,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000236128;MQB=1.64592e-12;MQSB=0.597149;RPB=0.956219;SGB=21.2038;VDB=0.396472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.10:17575236 chr10:017575236 0 W/17575236-17575236 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.995381;DP=2628;DP4=1422,1101,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.45306e-06;MQSB=0.974558;RPB=0.677417;SGB=28.9929;VDB=0.477182;EFF=INTRON(MODIFIER||||115|LOC_Os10g33380|protein_coding|CODING|LOC_Os10g33380.1|4|1) FN-99.SNP.10:17579370 chr10:017579370 0 W/17579370-17579370 FN-99 Single Base Substitution G-A INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1477-S.SNP.10:17579370 chr10:017579370 0 W/17579370-17579370 FN1477-S Single Base Substitution G-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN811-S.SNP.10:17583134 chr10:017583134 0 W/17583134-17583134 FN811-S Single Base Substitution G-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1346-S.SNP.10:17584391 chr10:017584391 0 W/17584391-17584391 FN1346-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3463-S.SNP.10:17602914 chr10:017602914 0 W/17602914-17602914 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.991626;DP=2886;DP4=1437,1349,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.15439e-07;MQSB=0.982591;RPB=0.822648;SGB=53.2642;VDB=0.0826138;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.10:17618425 chr10:017618425 0 W/17618425-17618425 FN1073-S Single Base Substitution T-A INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2374.SNP.10:17631068 chr10:017631068 0 W/17631068-17631068 FN2374 SNP C -> T AC=1;AN=192;BQB=0.672277;DP=4457;DP4=2304,1905,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.0152569;MQB=0.00013368;MQSB=0.00194642;RPB=0.961113;SGB=72.0322;VDB=0.556241;EFF=INTERGENIC(MODIFIER||||||||||1) FN499-S.SNP.10:17639610 chr10:017639610 0 W/17639610-17639610 FN499-S Single Base Substitution C-T INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1651-S.SNP.10:17651306 chr10:017651306 0 W/17651306-17651306 FN1651-S Single Base Substitution G-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN972-S.SNP.10:17653811 chr10:017653811 0 W/17653811-17653811 FN972-S Single Base Substitution T-C INTRON HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1282-S.SNP.10:17658548 chr10:017658548 0 W/17658548-17658548 FN1282-S Single Base Substitution C-A INTRON HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1269-S.SNP.10:17659242 chr10:017659242 0 W/17659242-17659242 FN1269-S Single Base Substitution A-T INTRON HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN487-S.SNP.10:17660754 chr10:017660754 0 W/17660754-17660754 FN487-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g33500 expressed protein SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2428.SNP.10:17662119 chr10:017662119 0 W/17662119-17662119 FN2428 SNP G -> T AC=1;AN=200;BQB=0.475429;DP=4858;DP4=2377,2155,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.04117e-08;MQSB=0.885038;RPB=0.0307336;SGB=33.0593;VDB=0.336114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.10:17662336 chr10:017662336 0 W/17662336-17662336 FN2141-S SNP T -> A AC=2;AN=168;BQB=0.371568;DP=3988;DP4=1894,2008,28,39;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.86927e-34;MQSB=0.986325;RPB=0.678252;SGB=-65.6873;VDB=0.409916;EFF=INTERGENIC(MODIFIER||||||||||1) FN-45.SNP.10:17664309 chr10:017664309 0 W/17664309-17664309 FN-45 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os10g33510 hypothetical protein SNo: 45, Mutant_ID: FN-45, Generation: M2, Mutations: 30, Genes: 47, Seed availability: Yes. FN815-S.SNP.10:17667783 chr10:017667783 0 W/17667783-17667783 FN815-S Single Base Substitution T-A INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN2683-S.SNP.10:17669352 chr10:017669352 0 W/17669352-17669352 FN2683-S SNP G -> A AC=1;AN=200;BQB=0.999015;DP=5049;DP4=2224,2582,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67103e-06;MQSB=0.986404;RPB=0.691281;SGB=24.2746;VDB=0.248784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.10:17672876 chr10:017672876 0 W/17672876-17672876 FN2335 SNP G -> A AC=1;AN=192;BQB=0.189465;DP=5158;DP4=2562,2313,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.06555e-08;MQSB=0.999957;RPB=0.992124;SGB=10.4835;VDB=0.373104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.10:17681829 chr10:017681829 0 W/17681829-17681829 FN2351 SNP C -> T AC=1;AN=192;BQB=0.896728;DP=4784;DP4=2075,2254,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.17179e-07;MQSB=0.969935;RPB=0.781713;SGB=43.3444;VDB=0.210436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.10:17685308 chr10:017685308 0 W/17685308-17685308 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.66795;DP=3933;DP4=1895,1805,19,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.18819e-20;MQSB=0.968228;RPB=0.138313;SGB=-4.31386;VDB=0.667814;EFF=INTERGENIC(MODIFIER||||||||||1) FN-116.SNP.10:17685762 chr10:017685762 0 W/17685762-17685762 FN-116 Single Base Substitution C-A INTERGENIC HET SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN-315.SNP.10:17686108 chr10:017686108 0 W/17686108-17686108 FN-315 Single Base Substitution C-G INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN935-S.SNP.10:17699277 chr10:017699277 0 W/17699277-17699277 FN935-S Single Base Substitution G-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2597-S.SNP.10:17700249 chr10:017700249 0 W/17700249-17700249 FN2597-S SNP C -> A AC=1;AN=198;BQB=0.74287;DP=4283;DP4=1989,2026,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.43111e-11;MQSB=0.999359;RPB=0.380595;SGB=95.5;VDB=0.0567232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.10:17700705 chr10:017700705 0 W/17700705-17700705 FN3554-S SNP T -> C AC=1;AN=188;BQB=0.991616;DP=3767;DP4=1812,1674,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21578e-13;MQSB=0.670051;RPB=0.90678;SGB=41.3359;VDB=0.629359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3738-S.SNP.10:17703327 chr10:017703327 0 W/17703327-17703327 FN3738-S SNP A -> G AC=1;AN=190;BQB=0.907959;DP=2635;DP4=1296,1255,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.94725e-08;MQSB=0.856267;RPB=0.843195;SGB=18.552;VDB=0.110458;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G642|1288|LOC_Os10g33570|protein_coding|CODING|LOC_Os10g33570.1|3|1) FN1355-S.SNP.10:17713395 chr10:017713395 0 W/17713395-17713395 FN1355-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3316-S.SNP.10:17734461 chr10:017734461 0 W/17734461-17734461 FN3316-S SNP A -> G AC=2;AN=184;BQB=0.993578;DP=3050;DP4=1332,1619,11,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.97476e-11;MQSB=0.882109;RPB=0.998707;SGB=60.4004;VDB=0.545207;EFF=SPLICE_SITE_REGION(LOW||||528|LOC_Os10g33640|protein_coding|CODING|LOC_Os10g33640.1|7|1),INTRON(MODIFIER||||528|LOC_Os10g33640|protein_coding|CODING|LOC_Os10g33640.1|7|1) FN1403-S.SNP.10:17738758 chr10:017738758 0 W/17738758-17738758 FN1403-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN1190-S.SNP.10:17752166 chr10:017752166 0 W/17752166-17752166 FN1190-S Single Base Substitution G-T INTRON HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3722-S.SNP.10:17756380 chr10:017756380 0 W/17756380-17756380 FN3722-S SNP C -> A AC=1;AN=190;BQB=0.87524;DP=2616;DP4=1130,1259,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11994e-11;MQSB=0.95777;RPB=0.281235;SGB=53.8699;VDB=0.00421581;EFF=INTRON(MODIFIER||||541|LOC_Os10g33680|protein_coding|CODING|LOC_Os10g33680.1|1|1) FN4260-S.SNP.10:17757627 chr10:017757627 0 W/17757627-17757627 FN4260-S SNP G -> A AC=1;AN=170;BQB=1;DP=2609;DP4=1277,1243,14,14;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.16125e-16;MQSB=0.999164;RPB=0.820403;SGB=118.955;VDB=0.312166;EFF=INTRON(MODIFIER||||541|LOC_Os10g33680|protein_coding|CODING|LOC_Os10g33680.1|1|1) FN1548-S.SNP.10:17762673 chr10:017762673 0 W/17762673-17762673 FN1548-S SNP G -> T AC=2;AN=188;BQB=0.948369;DP=3666;DP4=1993,1636,14,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.66844e-10;MQSB=0.997788;RPB=0.987228;SGB=-13.9132;VDB=0.803842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L516F|541|LOC_Os10g33680|protein_coding|CODING|LOC_Os10g33680.1|12|1) FN2183-S.SNP.10:17767966 chr10:017767966 0 W/17767966-17767966 FN2183-S SNP T -> C AC=2;AN=190;BQB=0.728924;DP=4723;DP4=2459,1827,27,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00021173;MQB=3.00069e-33;MQSB=0.919817;RPB=0.433831;SGB=78.6972;VDB=0.149932;EFF=INTRON(MODIFIER||||270|LOC_Os10g33690|protein_coding|CODING|LOC_Os10g33690.1|2|1) FN2274-S.SNP.10:17769049 chr10:017769049 0 W/17769049-17769049 FN2274-S SNP A -> G AC=1;AN=190;BQB=0.989257;DP=4966;DP4=2307,2378,20,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29187e-23;MQSB=0.99983;RPB=0.999944;SGB=44.5119;VDB=0.319393;EFF=INTRON(MODIFIER||||270|LOC_Os10g33690|protein_coding|CODING|LOC_Os10g33690.1|4|1) FN2274-S.SNP.10:17769196 chr10:017769196 0 W/17769196-17769196 FN2274-S SNP T -> G AC=1;AN=190;BQB=0.0987848;DP=4766;DP4=2268,2214,19,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.87834e-16;MQSB=0.693076;RPB=0.953498;SGB=67.0756;VDB=0.804142;EFF=INTRON(MODIFIER||||270|LOC_Os10g33690|protein_coding|CODING|LOC_Os10g33690.1|4|1) FN3520-S.SNP.10:17772487 chr10:017772487 0 W/17772487-17772487 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.812398;DP=2554;DP4=1220,1265,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22751e-08;MQSB=0.813868;RPB=0.941412;SGB=50.1574;VDB=0.970009;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.10:17780339 chr10:017780339 0 W/17780339-17780339 FN718-S Single Base Substitution A-C INTRON HET SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN455-S.SNP.10:17804720 chr10:017804720 0 W/17804720-17804720 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN2622-S.SNP.10:17815213 chr10:017815213 0 W/17815213-17815213 FN2622-S SNP C -> T AC=1;AN=200;BQB=0.987682;DP=4942;DP4=2180,2504,13,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18236e-21;MQSB=0.893205;RPB=0.530905;SGB=150.973;VDB=0.315442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.10:17817440 chr10:017817440 0 W/17817440-17817440 FN3440-S SNP G -> C AC=1;AN=184;BQB=0.913482;DP=2380;DP4=1039,1270,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.69503e-07;MQSB=0.998688;RPB=0.795633;SGB=53.2642;VDB=0.558785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.10:17824681 chr10:017824681 0 W/17824681-17824681 FN2374 SNP C -> T AC=1;AN=192;BQB=0.685389;DP=4758;DP4=2233,2136,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000630517;MQB=1.59532e-11;MQSB=0.997439;RPB=0.999887;SGB=41.7357;VDB=0.195505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A44T|938|LOC_Os10g33740|protein_coding|CODING|LOC_Os10g33740.1|2|1) FN872-S.SNP.10:17831995 chr10:017831995 0 W/17831995-17831995 FN872-S Single Base Substitution A-T INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN872-S.SNP.10:17831996 chr10:017831996 0 W/17831996-17831996 FN872-S Single Base Substitution G-T INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3651-S.SNP.10:17834032 chr10:017834032 0 W/17834032-17834032 FN3651-S SNP G -> C AC=1;AN=190;BQB=0.969454;DP=2633;DP4=1119,1421,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07538e-06;MQSB=0.915386;RPB=0.891563;SGB=35.4339;VDB=0.198714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.10:17834058 chr10:017834058 0 W/17834058-17834058 FN1619-S Single Base Substitution C-T INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-169.SNP.10:17836969 chr10:017836969 0 W/17836969-17836969 FN-169 Single Base Substitution C-T INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN4224-S.SNP.10:17837836 chr10:017837836 0 W/17837836-17837836 FN4224-S SNP G -> A AC=2;AN=170;BQB=0.897465;DP=2224;DP4=1088,1043,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.96838e-14;MQSB=0.928647;RPB=0.613645;SGB=96.7413;VDB=0.198572;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.10:17848144 chr10:017848144 0 W/17848144-17848144 FN770-S Single Base Substitution T-C INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2649-S.SNP.10:17850953 chr10:017850953 0 W/17850953-17850953 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.776067;DP=4630;DP4=2112,2282,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.89835e-17;MQSB=0.936455;RPB=0.0874857;SGB=94.3471;VDB=0.352912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I303V|324|LOC_Os10g33760|protein_coding|CODING|LOC_Os10g33760.1|3|1) FN360-S.SNP.10:17861258 chr10:017861258 0 W/17861258-17861258 FN360-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-245.SNP.10:17861421 chr10:017861421 0 W/17861421-17861421 FN-245 Single Base Substitution G-A INTRON HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2594-S.SNP.10:17861623 chr10:017861623 0 W/17861623-17861623 FN2594-S SNP T -> C AC=2;AN=198;BQB=0.995049;DP=4038;DP4=1870,2021,21,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.73876e-24;MQSB=0.992792;RPB=0.322266;SGB=178.212;VDB=0.37045;EFF=INTRON(MODIFIER||||929|LOC_Os10g33770|protein_coding|CODING|LOC_Os10g33770.1|6|1) FN493-S.SNP.10:17862060 chr10:017862060 0 W/17862060-17862060 FN493-S Single Base Substitution C-T INTRON HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2789-S.SNP.10:17864233 chr10:017864233 0 W/17864233-17864233 FN2789-S SNP C -> T AC=1;AN=198;BQB=0.983543;DP=4314;DP4=2073,2026,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.74888e-08;MQSB=0.961872;RPB=0.314418;SGB=43.7442;VDB=0.234625;EFF=INTRON(MODIFIER||||929|LOC_Os10g33770|protein_coding|CODING|LOC_Os10g33770.1|9|1) FN1158-S.SNP.10:17868090 chr10:017868090 0 W/17868090-17868090 FN1158-S Single Base Substitution C-G SPLICE_SITE_REGION HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN3425-S.SNP.10:17873100 chr10:017873100 0 W/17873100-17873100 FN3425-S SNP G -> A AC=1;AN=184;BQB=0.976922;DP=3003;DP4=1539,1369,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.4774e-09;MQSB=0.840851;RPB=0.999054;SGB=39.2697;VDB=0.273871;EFF=INTERGENIC(MODIFIER||||||||||1) FN706-S.SNP.10:17875071 chr10:017875071 0 W/17875071-17875071 FN706-S Single Base Substitution C-T SPLICE_SITE_REGION HOMO SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN479-S.SNP.10:17877408 chr10:017877408 0 W/17877408-17877408 FN479-S Single Base Substitution C-T INTRON HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2366.SNP.10:17880457 chr10:017880457 0 W/17880457-17880457 FN2366 SNP T -> C AC=1;AN=192;BQB=0.784411;DP=4681;DP4=2419,1903,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.49932e-11;MQSB=0.645749;RPB=0.999903;SGB=22.9983;VDB=0.925946;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.10:17883302 chr10:017883302 0 W/17883302-17883302 FN1135-S Single Base Substitution T-G INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN2423.SNP.10:17884579 chr10:017884579 0 W/17884579-17884579 FN2423 SNP A -> C AC=1;AN=200;BQB=0.933866;DP=5318;DP4=2912,2144,8,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.26756e-07;MQSB=0.945477;RPB=0.518697;SGB=54.6902;VDB=0.0221363;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.10:17898751 chr10:017898751 0 W/17898751-17898751 FN4130-S SNP G -> C AC=1;AN=182;BQB=0.981882;DP=2285;DP4=909,1308,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000437637;MQB=8.39178e-07;MQSB=0.661159;RPB=0.879512;SGB=44.1115;VDB=0.134027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.10:17899062 chr10:017899062 0 W/17899062-17899062 FN2455 SNP G -> T AC=1;AN=200;BQB=0.382505;DP=4632;DP4=2287,1981,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.17499e-08;MQSB=0.943121;RPB=0.979381;SGB=-34.9207;VDB=0.734799;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.10:17900613 chr10:017900613 0 W/17900613-17900613 FN2295 SNP G -> A AC=1;AN=192;BQB=0.4585;DP=4990;DP4=2388,2106,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000200401;MQB=7.89915e-13;MQSB=0.999998;RPB=0.825203;SGB=-138.233;VDB=0.175401;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.10:17901552 chr10:017901552 0 W/17901552-17901552 FN-215 Single Base Substitution C-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3591-S.SNP.10:17906891 chr10:017906891 0 W/17906891-17906891 FN3591-S SNP T -> A AC=1;AN=188;BQB=0.335478;DP=2763;DP4=1431,1211,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.06585e-06;MQSB=0.961695;RPB=0.994653;SGB=18.4463;VDB=0.304231;EFF=INTRON(MODIFIER||||298|LOC_Os10g33790|protein_coding|CODING|LOC_Os10g33790.1|9|1),INTRON(MODIFIER||||280|LOC_Os10g33790|protein_coding|CODING|LOC_Os10g33790.2|9|1) FN-307.SNP.10:17917770 chr10:017917770 0 W/17917770-17917770 FN-307 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3997-S.SNP.10:17926443 chr10:017926443 0 W/17926443-17926443 FN3997-S SNP G -> A AC=1;AN=168;BQB=0.961436;DP=2716;DP4=1282,1182,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76118e-09;MQSB=0.869433;RPB=0.959114;SGB=5.62151;VDB=0.721348;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.10:17929323 chr10:017929323 0 W/17929323-17929323 FN4023-S SNP A -> G AC=2;AN=168;BQB=0.947023;DP=2732;DP4=1413,1226,16,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.42164e-15;MQSB=0.959944;RPB=0.9392;SGB=82.7794;VDB=0.934304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.10:17932697 chr10:017932697 0 W/17932697-17932697 FN3855-S SNP G -> T AC=1;AN=158;BQB=0.973752;DP=2317;DP4=1360,901,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.82379e-05;MQSB=0.676801;RPB=0.982561;SGB=25.2211;VDB=0.596338;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.10:17932932 chr10:017932932 0 W/17932932-17932932 FN-400 Single Base Substitution T-A INTERGENIC HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.10:17932932 chr10:017932932 0 W/17932932-17932932 FN400-S Single Base Substitution T-A INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. W466-5-1.SNP.10:17933749 chr10:017933749 0 W/17933749-17933749 W466-5-1 Single Base Substitution C-A INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN-293.SNP.10:17938026 chr10:017938026 0 W/17938026-17938026 FN-293 Single Base Substitution T-C INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2423.SNP.10:17940685 chr10:017940685 0 W/17940685-17940685 FN2423 SNP T -> C AC=1;AN=200;BQB=0.812824;DP=3550;DP4=1544,1500,10,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00028169;MQB=2.74401e-08;MQSB=2.42978e-08;RPB=0.900312;SGB=42.5108;VDB=0.144949;EFF=INTERGENIC(MODIFIER||||||||||1) FN1079-S.SNP.10:17953602 chr10:017953602 0 W/17953602-17953602 FN1079-S Single Base Substitution T-C INTRON HET SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN1136-S.SNP.10:17992861 chr10:017992861 0 W/17992861-17992861 FN1136-S Single Base Substitution C-T INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN4130-S.SNP.10:18001671 chr10:018001671 0 W/18001671-18001671 FN4130-S SNP C -> T AC=1;AN=182;BQB=0.251553;DP=2964;DP4=1397,1503,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.64694e-06;MQSB=0.991569;RPB=0.813711;SGB=57.644;VDB=0.686276;EFF=INTRON(MODIFIER||||204|LOC_Os10g33900|protein_coding|CODING|LOC_Os10g33900.1|1|1) FN4130-S.SNP.10:18002198 chr10:018002198 0 W/18002198-18002198 FN4130-S SNP G -> C AC=1;AN=182;BQB=0.903661;DP=2687;DP4=1202,1435,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.53541e-06;MQSB=0.967898;RPB=0.67844;SGB=44.1115;VDB=0.366229;EFF=INTRON(MODIFIER||||204|LOC_Os10g33900|protein_coding|CODING|LOC_Os10g33900.1|2|1) FN3322-S.SNP.10:18006607 chr10:018006607 0 W/18006607-18006607 FN3322-S SNP A -> T AC=1;AN=184;BQB=0.961039;DP=3601;DP4=1923,1519,5,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.58803e-05;MQSB=0.675139;RPB=0.876137;SGB=26.1347;VDB=0.0287765;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.10:18010044 chr10:018010044 0 W/18010044-18010044 FN1480-S Single Base Substitution C-A INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN2614-S.SNP.10:18010346 chr10:018010346 0 W/18010346-18010346 FN2614-S SNP A -> C AC=1;AN=198;BQB=0.959611;DP=4680;DP4=2322,2136,6,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10275e-14;MQSB=0.8674;RPB=0.553387;SGB=100.095;VDB=0.824944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.10:18010662 chr10:018010662 0 W/18010662-18010662 FN2365 SNP G -> A AC=2;AN=192;BQB=0.272697;DP=4834;DP4=2145,2416,21,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.87582e-29;MQSB=0.910351;RPB=0.949437;SGB=6.11221;VDB=0.732041;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.10:18014287 chr10:018014287 0 W/18014287-18014287 FN-103 Single Base Substitution T-A INTRON HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN2212-S.SNP.10:18014287 chr10:018014287 0 W/18014287-18014287 FN2212-S SNP T -> A AC=1;AN=190;BQB=0.570659;DP=5017;DP4=2395,2074,17,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13694e-14;MQSB=0.997522;RPB=0.920145;SGB=-4.91383;VDB=0.00519923;EFF=INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.2|1|1),INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.1|1|1),INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.3|1|1) FN967-S.SNP.10:18014287 chr10:018014287 0 W/18014287-18014287 FN967-S Single Base Substitution T-A INTRON HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2245-S.SNP.10:18014715 chr10:018014715 0 W/18014715-18014715 FN2245-S SNP A -> G AC=1;AN=190;BQB=0.761796;DP=4787;DP4=1771,2668,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.26088e-06;MQSB=0.974733;RPB=0.984692;SGB=21.8853;VDB=0.9326;EFF=INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.2|1|1),INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.1|1|1),INTRON(MODIFIER||||370|LOC_Os10g33920|protein_coding|CODING|LOC_Os10g33920.3|1|1) FN1485-S.SNP.10:18019843 chr10:018019843 0 W/18019843-18019843 FN1485-S Single Base Substitution G-A INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN3949-S.SNP.10:18023300 chr10:018023300 0 W/18023300-18023300 FN3949-S SNP A -> G AC=1;AN=168;BQB=0.995781;DP=2499;DP4=1206,1185,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.52409e-07;MQSB=0.959384;RPB=0.998349;SGB=34.748;VDB=0.195804;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.10:18025807 chr10:018025807 0 W/18025807-18025807 FN1346-S Single Base Substitution G-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3715-S.SNP.10:18026260 chr10:018026260 0 W/18026260-18026260 FN3715-S SNP C -> A AC=1;AN=190;BQB=0.955847;DP=2639;DP4=1362,1138,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05813e-10;MQSB=0.967006;RPB=0.912977;SGB=60.9777;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.10:18028758 chr10:018028758 0 W/18028758-18028758 FN3415-S SNP T -> C AC=1;AN=184;BQB=0.745992;DP=3418;DP4=1984,1276,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.02905e-10;MQSB=0.99148;RPB=0.242766;SGB=56.8786;VDB=0.566647;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.10:18032936 chr10:018032936 0 W/18032936-18032936 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1028-S.SNP.10:18032941 chr10:018032941 0 W/18032941-18032941 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2199-S.SNP.10:18038270 chr10:018038270 0 W/18038270-18038270 FN2199-S SNP T -> A AC=1;AN=190;BQB=0.999999;DP=4931;DP4=2471,2207,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53587e-10;MQSB=0.978873;RPB=0.784573;SGB=50.3161;VDB=0.858225;EFF=INTRON(MODIFIER||||412|LOC_Os10g33930|protein_coding|CODING|LOC_Os10g33930.1|4|1) FN-5.SNP.10:18043159 chr10:018043159 0 W/18043159-18043159 FN-5 Single Base Substitution A-G INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN1708-S.SNP.10:18046167 chr10:018046167 0 W/18046167-18046167 FN1708-S SNP G -> A AC=2;AN=188;BQB=0.703104;DP=3570;DP4=1581,1937,11,23;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0.000280112;MQB=0.105779;MQSB=0.911585;RPB=0.828241;SGB=-82.2964;VDB=0.474758;EFF=INTERGENIC(MODIFIER||||||||||1) FN-312.SNP.10:18046186 chr10:018046186 0 W/18046186-18046186 FN-312 Single Base Substitution G-A INTERGENIC HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN871-S.SNP.10:18046308 chr10:018046308 0 W/18046308-18046308 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-293.SNP.10:18049345 chr10:018049345 0 W/18049345-18049345 FN-293 Single Base Substitution T-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN-293.SNP.10:18049346 chr10:018049346 0 W/18049346-18049346 FN-293 Single Base Substitution A-T INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN3411-S.SNP.10:18052207 chr10:018052207 0 W/18052207-18052207 FN3411-S SNP T -> C AC=1;AN=184;BQB=0.716724;DP=3249;DP4=1833,1222,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.04631e-12;MQSB=0.305114;RPB=0.712579;SGB=84.9167;VDB=0.513651;EFF=UTR_5_PRIME(MODIFIER||19||698|LOC_Os10g33940|protein_coding|CODING|LOC_Os10g33940.1|2|1) FN-50.SNP.10:18056551 chr10:018056551 0 W/18056551-18056551 FN-50 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os10g33940 auxin response factor 18, putative, expressed SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN809-S.SNP.10:18061752 chr10:018061752 0 W/18061752-18061752 FN809-S Single Base Substitution A-T INTERGENIC HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN685-S.SNP.10:18066595 chr10:018066595 0 W/18066595-18066595 FN685-S Single Base Substitution G-A INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN685-S.SNP.10:18066596 chr10:018066596 0 W/18066596-18066596 FN685-S Single Base Substitution A-G INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN527-S.SNP.10:18068185 chr10:018068185 0 W/18068185-18068185 FN527-S Single Base Substitution T-A INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1317-S.SNP.10:18068294 chr10:018068294 0 W/18068294-18068294 FN1317-S Single Base Substitution T-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN524-S.SNP.10:18068753 chr10:018068753 0 W/18068753-18068753 FN524-S Single Base Substitution T-C INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2254-S.SNP.10:18070175 chr10:018070175 0 W/18070175-18070175 FN2254-S SNP G -> A AC=1;AN=190;BQB=0.523965;DP=4632;DP4=2005,2367,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.38498e-07;MQSB=0.759378;RPB=0.321477;SGB=18.552;VDB=0.0907686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.10:18074983 chr10:018074983 0 W/18074983-18074983 FN2366 SNP T -> A AC=1;AN=192;BQB=0.32938;DP=5000;DP4=2020,2444,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.41157e-11;MQSB=0.846827;RPB=0.866834;SGB=-8.56084;VDB=0.391114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.10:18079374 chr10:018079374 0 W/18079374-18079374 FN2366 SNP G -> T AC=1;AN=192;BQB=0.156582;DP=4984;DP4=2438,2282,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.17226e-07;MQSB=0.876373;RPB=0.739707;SGB=8.91915;VDB=0.991178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.10:18081089 chr10:018081089 0 W/18081089-18081089 FN3753-S SNP G -> A AC=2;AN=190;BQB=0.756188;DP=3158;DP4=1399,1626,14,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000316656;MQB=9.62656e-23;MQSB=0.778031;RPB=0.132122;SGB=162.942;VDB=0.557704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3576-S.SNP.10:18083299 chr10:018083299 0 W/18083299-18083299 FN3576-S SNP T -> G AC=1;AN=188;BQB=0.26435;DP=2432;DP4=1142,1100,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.39021e-07;MQSB=0.698581;RPB=0.999629;SGB=3.99491;VDB=0.740498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.10:18087197 chr10:018087197 0 W/18087197-18087197 FN2553-S SNP A -> G AC=1;AN=198;BQB=0.286388;DP=4257;DP4=2029,2030,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.24666e-07;MQSB=0.942811;RPB=0.166689;SGB=1.37381;VDB=0.122248;EFF=SPLICE_SITE_REGION(LOW||||840|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.1|4|1),SPLICE_SITE_REGION(LOW||||840|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.2|3|1),SPLICE_SITE_REGION(LOW||||481|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.3|4|1),SPLICE_SITE_REGION(LOW||||458|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.4|4|1),INTRON(MODIFIER||||840|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.1|4|1),INTRON(MODIFIER||||840|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.2|3|1),INTRON(MODIFIER||||481|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.3|4|1),INTRON(MODIFIER||||458|LOC_Os10g33960|protein_coding|CODING|LOC_Os10g33960.4|4|1) FN1256-S.SNP.10:18092748 chr10:018092748 0 W/18092748-18092748 FN1256-S Single Base Substitution G-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN470-S.SNP.10:18096696 chr10:018096696 0 W/18096696-18096696 FN470-S Single Base Substitution G-A INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. W138-2-1.SNP.10:18096746 chr10:018096746 0 W/18096746-18096746 W138-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN792-S.SNP.10:18097422 chr10:018097422 0 W/18097422-18097422 FN792-S Single Base Substitution G-T INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2254-S.SNP.10:18114554 chr10:018114554 0 W/18114554-18114554 FN2254-S SNP T -> G AC=1;AN=190;BQB=0.997659;DP=4930;DP4=2327,2311,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00020284;MQB=5.42748e-07;MQSB=0.943186;RPB=0.961653;SGB=53.6492;VDB=0.686723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2598-S.SNP.10:18114749 chr10:018114749 0 W/18114749-18114749 FN2598-S SNP T -> C AC=1;AN=198;BQB=0.97559;DP=3869;DP4=1922,1736,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.50815e-05;MQSB=0.972829;RPB=0.863131;SGB=25.7687;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.10:18123496 chr10:018123496 0 W/18123496-18123496 FN4039-S SNP G -> C AC=1;AN=168;BQB=0.491157;DP=2121;DP4=1086,903,10,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.21044e-08;MQSB=0.698359;RPB=0.998628;SGB=56.6036;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN-384 Single Base Substitution C-T INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1008-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN1008-S Single Base Substitution C-T INTERGENIC HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1186-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1349-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN1349-S Single Base Substitution C-T INTERGENIC HET SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN1543-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN1543-S Single Base Substitution C-T INTERGENIC HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN2564-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN2564-S SNP C -> T AC=1;AN=198;BQB=0.314514;DP=4323;DP4=2171,1964,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.64047e-05;MQSB=0.999313;RPB=0.999843;SGB=11.1786;VDB=0.902899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN3480-S SNP C -> T AC=2;AN=184;BQB=0.7735;DP=2562;DP4=1280,1175,17,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.01652e-17;MQSB=0.989848;RPB=0.968507;SGB=102.662;VDB=0.629057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN3743-S SNP C -> T AC=2;AN=190;BQB=0.601068;DP=2835;DP4=1388,1318,12,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.62802e-12;MQSB=0.98978;RPB=0.972947;SGB=82.301;VDB=0.29715;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN4072-S SNP C -> T AC=2;AN=182;BQB=0.103013;DP=2775;DP4=1430,1239,15,10;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.32086e-10;MQSB=0.748424;RPB=0.966471;SGB=77.758;VDB=0.366434;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN4202-S SNP C -> T AC=2;AN=170;BQB=0.262307;DP=2343;DP4=1148,1076,26,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.71778e-27;MQSB=0.95525;RPB=0.430434;SGB=206.829;VDB=0.77424;EFF=INTERGENIC(MODIFIER||||||||||1) FN478-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN478-S Single Base Substitution C-T INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN730-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN730-S Single Base Substitution C-T INTERGENIC HET SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN777-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN777-S Single Base Substitution C-T INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN941-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN941-S Single Base Substitution C-T INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN980-S.SNP.10:18124939 chr10:018124939 0 W/18124939-18124939 FN980-S Single Base Substitution C-T INTERGENIC HOMO SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1261-S.SNP.10:18131047 chr10:018131047 0 W/18131047-18131047 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2533-S.SNP.10:18131442 chr10:018131442 0 W/18131442-18131442 FN2533-S SNP C -> T AC=1;AN=198;BQB=0.375237;DP=4345;DP4=2083,1989,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.75186e-07;MQSB=0.922245;RPB=0.956947;SGB=9.3494;VDB=0.201148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.10:18131994 chr10:018131994 0 W/18131994-18131994 FN2707-S SNP T -> C AC=1;AN=200;BQB=0.47738;DP=4469;DP4=2217,2053,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.98079e-11;MQSB=0.959392;RPB=0.0853718;SGB=65.5058;VDB=0.12176;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.10:18145153 chr10:018145153 0 W/18145153-18145153 FN929-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN4154-S.SNP.10:18155258 chr10:018155258 0 W/18155258-18155258 FN4154-S SNP T -> A AC=1;AN=170;BQB=0.890028;DP=2558;DP4=1213,1274,3,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.66941e-07;MQSB=0.942032;RPB=0.998145;SGB=41.7633;VDB=0.965802;EFF=SPLICE_SITE_REGION(LOW||||168|LOC_Os10g34030|protein_coding|CODING|LOC_Os10g34030.1|2|1),INTRON(MODIFIER||||168|LOC_Os10g34030|protein_coding|CODING|LOC_Os10g34030.1|2|1) FN3559-S.SNP.10:18159399 chr10:018159399 0 W/18159399-18159399 FN3559-S SNP T -> A AC=1;AN=188;BQB=0.944899;DP=2567;DP4=1329,1159,12,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.68695e-08;MQSB=0.836073;RPB=0.579531;SGB=39.5276;VDB=0.668518;EFF=INTERGENIC(MODIFIER||||||||||1) FN3595-S.SNP.10:18160352 chr10:018160352 0 W/18160352-18160352 FN3595-S SNP T -> A AC=2;AN=190;BQB=0.999695;DP=2884;DP4=1305,1476,8,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.97789e-15;MQSB=0.999595;RPB=0.998939;SGB=103.742;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3778-S.SNP.10:18162556 chr10:018162556 0 W/18162556-18162556 FN3778-S SNP C -> T AC=1;AN=190;BQB=0.990307;DP=2785;DP4=1506,1135,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.79436e-10;MQSB=0.998672;RPB=0.954753;SGB=67.3108;VDB=0.754445;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.10:18163937 chr10:018163937 0 W/18163937-18163937 FN3756-S SNP C -> T AC=1;AN=190;BQB=0.746802;DP=2633;DP4=1409,1103,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.77937e-09;MQSB=0.97841;RPB=0.495281;SGB=58.2031;VDB=0.32629;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.10:18164096 chr10:018164096 0 W/18164096-18164096 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2305.SNP.10:18182890 chr10:018182890 0 W/18182890-18182890 FN2305 SNP G -> A AC=1;AN=192;BQB=0.984654;DP=4824;DP4=2146,2051,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.31278e-11;MQSB=0.850343;RPB=0.0364416;SGB=57.6018;VDB=0.0222091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.10:18187313 chr10:018187313 0 W/18187313-18187313 FN2202-S SNP A -> G AC=2;AN=190;BQB=0.410493;DP=4675;DP4=2109,1918,23,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48225e-18;MQSB=0.662283;RPB=0.0377594;SGB=36.7425;VDB=0.117635;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G55|132|LOC_Os10g34071|protein_coding|CODING|LOC_Os10g34071.1|1|1) FN1652-S.SNP.10:18189744 chr10:018189744 0 W/18189744-18189744 FN1652-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g34078 retrotransposon protein, putative, unclassified SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN1114-S.SNP.10:18194352 chr10:018194352 0 W/18194352-18194352 FN1114-S Single Base Substitution T-C INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1068-S.SNP.10:18204901 chr10:018204901 0 W/18204901-18204901 FN1068-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g34110 expressed protein SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1068-S.SNP.10:18204905 chr10:018204905 0 W/18204905-18204905 FN1068-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g34110 expressed protein SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN-191.SNP.10:18208129 chr10:018208129 0 W/18208129-18208129 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3559-S.SNP.10:18210815 chr10:018210815 0 W/18210815-18210815 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.976111;DP=2841;DP4=1507,1257,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0031679;MQB=0.00119896;MQSB=1.7369e-07;RPB=0.972753;SGB=67.1521;VDB=0.730327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R594C|1312|LOC_Os10g34120|protein_coding|CODING|LOC_Os10g34120.1|2|1) FN3901-S.SNP.10:18213515 chr10:018213515 0 W/18213515-18213515 FN3901-S SNP G -> C AC=1;AN=158;BQB=0.984916;DP=2625;DP4=1312,1231,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.38243e-06;MQSB=0.990214;RPB=0.222502;SGB=42.6978;VDB=0.227606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.10:18221691 chr10:018221691 0 W/18221691-18221691 FN1379-S Single Base Substitution A-G INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN3056-S.SNP.10:18223790 chr10:018223790 0 W/18223790-18223790 FN3056-S SNP T -> A AC=1;AN=184;BQB=0.927095;DP=3330;DP4=1865,1281,17,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.15648e-10;MQSB=0.565015;RPB=0.981642;SGB=-38.6214;VDB=0.161523;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.10:18232992 chr10:018232992 0 W/18232992-18232992 FN922-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g34170 glutaredoxin domain containing protein, putative, expressed SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN750-S.SNP.10:18234066 chr10:018234066 0 W/18234066-18234066 FN750-S Single Base Substitution G-A INTRON HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN2419.SNP.10:18237894 chr10:018237894 0 W/18237894-18237894 FN2419 SNP G -> C AC=1;AN=200;BQB=0.388549;DP=5113;DP4=2416,2389,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09642e-14;MQSB=0.907275;RPB=0.979887;SGB=101.557;VDB=0.734036;EFF=INTERGENIC(MODIFIER||||||||||1) FN1695-S.SNP.10:18240056 chr10:018240056 0 W/18240056-18240056 FN1695-S SNP C -> T AC=1;AN=188;BQB=0.601588;DP=3827;DP4=1926,1864,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.28207e-11;MQSB=0.929597;RPB=0.386931;SGB=-11.1967;VDB=0.658457;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.10:18255443 chr10:018255443 0 W/18255443-18255443 FN984-S Single Base Substitution C-T INTERGENIC HOMO SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1180-S.SNP.10:18257987 chr10:018257987 0 W/18257987-18257987 FN1180-S Single Base Substitution G-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN2141-S.SNP.10:18262907 chr10:018262907 0 W/18262907-18262907 FN2141-S SNP A -> T AC=2;AN=168;BQB=0.995239;DP=1830;DP4=564,1220,11,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.75175e-10;MQSB=0.352991;RPB=0.940842;SGB=65.6253;VDB=0.569805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.10:18263606 chr10:018263606 0 W/18263606-18263606 FN3917-S SNP G -> A AC=1;AN=158;BQB=0.990621;DP=1840;DP4=1019,755,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.19096e-06;MQSB=0.995336;RPB=0.618793;SGB=20.5959;VDB=0.275286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.10:18281785 chr10:018281785 0 W/18281785-18281785 FN2326 SNP C -> T AC=1;AN=192;BQB=0.242228;DP=4012;DP4=2027,1784,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000249252;MQB=2.22135e-07;MQSB=0.103952;RPB=0.993088;SGB=50.4731;VDB=0.125356;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T157|213|LOC_Os10g34260|protein_coding|CODING|LOC_Os10g34260.1|2|1) FN1014-S.SNP.10:18286881 chr10:018286881 0 W/18286881-18286881 FN1014-S Single Base Substitution T-A INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1014-S.SNP.10:18286882 chr10:018286882 0 W/18286882-18286882 FN1014-S Single Base Substitution C-G INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1014-S.SNP.10:18286883 chr10:018286883 0 W/18286883-18286883 FN1014-S Single Base Substitution G-C INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN687-S.SNP.10:18289323 chr10:018289323 0 W/18289323-18289323 FN687-S Single Base Substitution G-A INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1450-S.SNP.10:18306693 chr10:018306693 0 W/18306693-18306693 FN1450-S Single Base Substitution G-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1675-S.SNP.10:18307964 chr10:018307964 0 W/18307964-18307964 FN1675-S SNP G -> A AC=1;AN=188;BQB=0.229899;DP=3720;DP4=1932,1722,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.5905e-06;MQSB=0.714185;RPB=0.767217;SGB=-86.4405;VDB=0.0528463;EFF=INTERGENIC(MODIFIER||||||||||1) FN1071-S.SNP.10:18314298 chr10:018314298 0 W/18314298-18314298 FN1071-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN-293.SNP.10:18320891 chr10:018320891 0 W/18320891-18320891 FN-293 Single Base Substitution G-A INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2353.SNP.10:18326818 chr10:018326818 0 W/18326818-18326818 FN2353 SNP C -> A AC=1;AN=192;BQB=0.467971;DP=5094;DP4=2573,2232,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.03393e-09;MQSB=0.981475;RPB=0.940537;SGB=81.1609;VDB=0.614673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G579W|1078|LOC_Os10g34380|protein_coding|CODING|LOC_Os10g34380.1|8|1) FN1525-S.SNP.10:18336562 chr10:018336562 0 W/18336562-18336562 FN1525-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2655-S.SNP.10:18347668 chr10:018347668 0 W/18347668-18347668 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.960104;DP=4510;DP4=2255,2004,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99537e-13;MQSB=0.798222;RPB=0.701809;SGB=69.1109;VDB=0.816201;EFF=INTRON(MODIFIER||||727|LOC_Os10g34400|protein_coding|CODING|LOC_Os10g34400.1|5|1),INTRON(MODIFIER||||727|LOC_Os10g34400|protein_coding|CODING|LOC_Os10g34400.2|5|1) FN789-S.SNP.10:18352125 chr10:018352125 0 W/18352125-18352125 FN789-S Single Base Substitution G-A INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2316.SNP.10:18352161 chr10:018352161 0 W/18352161-18352161 FN2316 SNP C -> A AC=2;AN=192;BQB=0.267614;DP=4831;DP4=2238,2277,33,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.42822e-31;MQSB=0.58452;RPB=0.973261;SGB=14.0131;VDB=0.903694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.10:18357061 chr10:018357061 0 W/18357061-18357061 FN3692-S SNP G -> C AC=1;AN=190;BQB=0.666857;DP=2850;DP4=991,1655,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22281e-08;MQSB=0.22134;RPB=0.647218;SGB=-36.7706;VDB=0.724644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.10:18360672 chr10:018360672 0 W/18360672-18360672 FN2282 SNP G -> A AC=1;AN=192;BQB=0.202411;DP=4252;DP4=2197,1810,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.76266e-11;MQSB=0.885228;RPB=0.966542;SGB=-11.3826;VDB=0.601497;EFF=START_GAINED(LOW||||1571|LOC_Os10g34430|protein_coding|CODING|LOC_Os10g34430.1|1|1),UTR_5_PRIME(MODIFIER||86||1571|LOC_Os10g34430|protein_coding|CODING|LOC_Os10g34430.1|1|1) FN3711-S.SNP.10:18363447 chr10:018363447 0 W/18363447-18363447 FN3711-S SNP T -> C AC=1;AN=190;BQB=0.992793;DP=3128;DP4=1658,1384,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.42365e-10;MQSB=0.794375;RPB=0.73765;SGB=53.8699;VDB=0.257391;EFF=INTRON(MODIFIER||||1571|LOC_Os10g34430|protein_coding|CODING|LOC_Os10g34430.1|7|1) FN1484-S.SNP.10:18365641 chr10:018365641 0 W/18365641-18365641 FN1484-S Single Base Substitution G-T INTRON HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1484-S.SNP.10:18365643 chr10:018365643 0 W/18365643-18365643 FN1484-S Single Base Substitution A-T INTRON HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN412-S.SNP.10:18368672 chr10:018368672 0 W/18368672-18368672 FN412-S Single Base Substitution T-C INTRON HOMO SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN-78.SNP.10:18374949 chr10:018374949 0 W/18374949-18374949 FN-78 Single Base Substitution G-A INTERGENIC HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3763-S.SNP.10:18376949 chr10:018376949 0 W/18376949-18376949 FN3763-S SNP A -> T AC=1;AN=190;BQB=0.803854;DP=2783;DP4=1258,1309,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.67792e-13;MQSB=0.487631;RPB=0.692682;SGB=-9.34484;VDB=0.259762;EFF=INTRON(MODIFIER||||323|LOC_Os10g34440|protein_coding|CODING|LOC_Os10g34440.1|1|1) FN1443-S.SNP.10:18380439 chr10:018380439 0 W/18380439-18380439 FN1443-S Single Base Substitution G-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN501-S.SNP.10:18380577 chr10:018380577 0 W/18380577-18380577 FN501-S Single Base Substitution C-T INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1528-S.SNP.10:18384422 chr10:018384422 0 W/18384422-18384422 FN1528-S Single Base Substitution T-G INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN929-S.SNP.10:18389857 chr10:018389857 0 W/18389857-18389857 FN929-S Single Base Substitution T-C INTRON HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN4185-S.SNP.10:18390633 chr10:018390633 0 W/18390633-18390633 FN4185-S SNP G -> C AC=1;AN=170;BQB=0.980135;DP=2843;DP4=1502,1262,3,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.51028e-05;MQSB=0.952018;RPB=0.999946;SGB=25.6601;VDB=0.510937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T553S|560|LOC_Os10g34480|protein_coding|CODING|LOC_Os10g34480.1|2|1),UTR_3_PRIME(MODIFIER||630||224|LOC_Os10g34470|protein_coding|CODING|LOC_Os10g34470.1|7|1) FN1513-S.SNP.10:18392026 chr10:018392026 0 W/18392026-18392026 FN1513-S Single Base Substitution G-T INTRON HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1571-S.SNP.10:18395524 chr10:018395524 0 W/18395524-18395524 FN1571-S Single Base Substitution C-T INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN866-S.SNP.10:18396583 chr10:018396583 0 W/18396583-18396583 FN866-S Single Base Substitution T-C INTERGENIC HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3393-S.SNP.10:18397353 chr10:018397353 0 W/18397353-18397353 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.935322;DP=2958;DP4=1261,1569,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.23146e-10;MQSB=0.830566;RPB=0.77345;SGB=84.9167;VDB=0.561811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.10:18400707 chr10:018400707 0 W/18400707-18400707 FN3901-S SNP A -> T AC=1;AN=158;BQB=0.76294;DP=2477;DP4=1206,1201,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.05707e-07;MQSB=0.981086;RPB=0.982986;SGB=42.6978;VDB=0.00697498;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.10:18404696 chr10:018404696 0 W/18404696-18404696 FN4142-S SNP G -> A AC=1;AN=170;BQB=0.887246;DP=2581;DP4=1222,1287,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.42362e-07;MQSB=0.932399;RPB=0.982617;SGB=41.7633;VDB=0.41025;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q134*|280|LOC_Os10g34500|protein_coding|CODING|LOC_Os10g34500.1|4|1) FN1221-S.SNP.10:18411838 chr10:018411838 0 W/18411838-18411838 FN1221-S Single Base Substitution G-T INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1285-S.SNP.10:18414388 chr10:018414388 0 W/18414388-18414388 FN1285-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN948-S.SNP.10:18422439 chr10:018422439 0 W/18422439-18422439 FN948-S Single Base Substitution A-G INTRON HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. W481-5-1.SNP.10:18426639 chr10:018426639 0 W/18426639-18426639 W481-5-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN-235.SNP.10:18430982 chr10:018430982 0 W/18430982-18430982 FN-235 Single Base Substitution A-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN-82.SNP.10:18433774 chr10:018433774 0 W/18433774-18433774 FN-82 Single Base Substitution A-T INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1411-S.SNP.10:18462648 chr10:018462648 0 W/18462648-18462648 FN1411-S Single Base Substitution C-T INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN3381-S.SNP.10:18466275 chr10:018466275 0 W/18466275-18466275 FN3381-S SNP C -> T AC=1;AN=184;BQB=0.902906;DP=2782;DP4=1101,1598,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0136592;MQB=0.0131508;MQSB=0.994949;RPB=0.53619;SGB=46.3132;VDB=0.0554092;EFF=INTRON(MODIFIER||||714|LOC_Os10g34650|protein_coding|CODING|LOC_Os10g34650.1|4|1) FN3569-S.SNP.10:18474711 chr10:018474711 0 W/18474711-18474711 FN3569-S SNP A -> G AC=1;AN=188;BQB=0.770453;DP=3007;DP4=1170,1712,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.44263e-08;MQSB=0.918657;RPB=0.825521;SGB=53.7007;VDB=0.876175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.10:18477750 chr10:018477750 0 W/18477750-18477750 FN1274-S Single Base Substitution C-A INTRON HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN2595-S.SNP.10:18481005 chr10:018481005 0 W/18481005-18481005 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.663989;DP=3380;DP4=1652,1560,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00177515;MQB=2.80345e-08;MQSB=0.581364;RPB=0.157281;SGB=40.149;VDB=0.107093;EFF=INTRON(MODIFIER||||150|LOC_Os10g34670|protein_coding|CODING|LOC_Os10g34670.1|2|1),INTRON(MODIFIER||||124|LOC_Os10g34670|protein_coding|CODING|LOC_Os10g34670.2|2|1) FN541-S.SNP.10:18489918 chr10:018489918 0 W/18489918-18489918 FN541-S Single Base Substitution A-G INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2484.SNP.10:18492539 chr10:018492539 0 W/18492539-18492539 FN2484 SNP A -> T AC=1;AN=200;BQB=0.666175;DP=4783;DP4=2290,2170,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.3618e-12;MQSB=0.792899;RPB=0.707773;SGB=14.3054;VDB=0.341303;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||690|LOC_Os10g34680|protein_coding|CODING|LOC_Os10g34680.1|12|1),INTRON(MODIFIER||||690|LOC_Os10g34680|protein_coding|CODING|LOC_Os10g34680.1|11|1);LOF=(LOC_Os10g34680|LOC_Os10g34680|1|1.00) FN-313.SNP.10:18495024 chr10:018495024 0 W/18495024-18495024 FN-313 Single Base Substitution A-G INTRON HET SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN2634-S.SNP.10:18497224 chr10:018497224 0 W/18497224-18497224 FN2634-S SNP A -> G AC=1;AN=200;BQB=0.980878;DP=4771;DP4=2282,2228,16,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.03055e-19;MQSB=0.939732;RPB=0.739854;SGB=105.163;VDB=0.374162;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.10:18499606 chr10:018499606 0 W/18499606-18499606 FN2670-S SNP T -> C AC=1;AN=200;BQB=0.999911;DP=4866;DP4=2184,2413,18,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.80124e-14;MQSB=0.499266;RPB=0.595534;SGB=83.5316;VDB=0.655519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H58R|60|LOC_Os10g34694|protein_coding|CODING|LOC_Os10g34694.1|3|1) FN2618-S.SNP.10:18504645 chr10:018504645 0 W/18504645-18504645 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.397506;DP=3686;DP4=1796,1575,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81728e-12;MQSB=0.923724;RPB=0.99993;SGB=83.2905;VDB=0.64436;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A9|485|LOC_Os10g34700|protein_coding|CODING|LOC_Os10g34700.1|1|1) FN-120.SNP.10:18509719 chr10:018509719 0 W/18509719-18509719 FN-120 Single Base Substitution A-G INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2387.SNP.10:18510140 chr10:018510140 0 W/18510140-18510140 FN2387 SNP G -> A AC=1;AN=192;BQB=0.627333;DP=4518;DP4=1958,2305,13,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.22985e-17;MQSB=0.965242;RPB=0.573749;SGB=-42.7339;VDB=0.337114;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.10:18512566 chr10:018512566 0 W/18512566-18512566 FN2789-S SNP T -> C AC=1;AN=198;BQB=0.667129;DP=4053;DP4=2005,1861,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000105565;MQSB=0.894118;RPB=0.972032;SGB=13.7737;VDB=0.98413;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.10:18512613 chr10:018512613 0 W/18512613-18512613 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3698-S.SNP.10:18514361 chr10:018514361 0 W/18514361-18514361 FN3698-S SNP G -> C AC=1;AN=190;BQB=0.97207;DP=3253;DP4=1510,1636,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31105e-09;MQSB=0.998763;RPB=0.992764;SGB=46.7622;VDB=0.836636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1064-S.SNP.10:18514655 chr10:018514655 0 W/18514655-18514655 FN1064-S Single Base Substitution G-A INTERGENIC HOMO SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1261-S.SNP.10:18527194 chr10:018527194 0 W/18527194-18527194 FN1261-S Single Base Substitution A-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1261-S.SNP.10:18527195 chr10:018527195 0 W/18527195-18527195 FN1261-S Single Base Substitution A-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2217-S.SNP.10:18529944 chr10:018529944 0 W/18529944-18529944 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.679931;DP=4496;DP4=2038,1958,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00044484;MQB=8.41809e-09;MQSB=0.0976488;RPB=0.989328;SGB=-12.1142;VDB=0.823883;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.10:18536258 chr10:018536258 0 W/18536258-18536258 FN3380-S SNP G -> A AC=1;AN=184;BQB=0.940244;DP=2501;DP4=1208,1228,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.05273e-08;MQSB=0.99877;RPB=0.954826;SGB=39.2697;VDB=0.838961;EFF=INTRON(MODIFIER||||995|LOC_Os10g34710|protein_coding|CODING|LOC_Os10g34710.1|15|1) FN3519-S.SNP.10:18538609 chr10:018538609 0 W/18538609-18538609 FN3519-S SNP T -> C AC=2;AN=188;BQB=0.827404;DP=2758;DP4=1344,1332,18,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.67819e-16;MQSB=0.992381;RPB=0.507349;SGB=103.307;VDB=0.437709;EFF=INTRON(MODIFIER||||995|LOC_Os10g34710|protein_coding|CODING|LOC_Os10g34710.1|22|1) FN506-S.SNP.10:18543187 chr10:018543187 0 W/18543187-18543187 FN506-S Single Base Substitution T-G INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2441.SNP.10:18550910 chr10:018550910 0 W/18550910-18550910 FN2441 SNP C -> T AC=2;AN=200;BQB=0.680912;DP=5057;DP4=2397,2298,28,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.1389e-35;MQSB=0.913909;RPB=0.929925;SGB=81.7226;VDB=0.927286;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y193|395|LOC_Os10g34740|protein_coding|CODING|LOC_Os10g34740.1|8|1) FN1464-S.SNP.10:18562442 chr10:018562442 0 W/18562442-18562442 FN1464-S Single Base Substitution A-G INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN-381.SNP.10:18571213 chr10:018571213 0 W/18571213-18571213 FN-381 Single Base Substitution A-T INTERGENIC HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN322-S.SNP.10:18572036 chr10:018572036 0 W/18572036-18572036 FN322-S Single Base Substitution C-A INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3446-S.SNP.10:18580314 chr10:018580314 0 W/18580314-18580314 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.819252;DP=3708;DP4=2475,1013,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.40533e-13;MQSB=0.804291;RPB=0.878811;SGB=67.4439;VDB=0.617645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G65S|100|LOC_Os10g34795|protein_coding|CODING|LOC_Os10g34795.1|1|1) FN3363-S.SNP.10:18581256 chr10:018581256 0 W/18581256-18581256 FN3363-S SNP A -> C AC=2;AN=184;BQB=0.960014;DP=2779;DP4=1110,1422,16,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.4316e-22;MQSB=0.643625;RPB=0.991854;SGB=76.2326;VDB=0.642497;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.10:18584902 chr10:018584902 0 W/18584902-18584902 FN2356 SNP C -> T AC=2;AN=192;BQB=0.494287;DP=4031;DP4=1110,2529,21,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.48752e-25;MQSB=0.952656;RPB=0.993104;SGB=128.924;VDB=0.633015;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.10:18595751 chr10:018595751 0 W/18595751-18595751 FN2584-S SNP A -> G AC=1;AN=198;BQB=0.841506;DP=4059;DP4=2009,1716,25,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.47941e-16;MQSB=0.132036;RPB=0.991706;SGB=-1.33826;VDB=0.0287309;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.10:18597161 chr10:018597161 0 W/18597161-18597161 FN2653-S SNP G -> A AC=2;AN=200;BQB=0.956879;DP=4730;DP4=2217,2245,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.93958e-16;MQSB=0.558937;RPB=0.571145;SGB=97.9523;VDB=0.817792;EFF=INTERGENIC(MODIFIER||||||||||1) FN761-S.SNP.10:18606038 chr10:018606038 0 W/18606038-18606038 FN761-S Single Base Substitution G-A INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN580-S.SNP.10:18608530 chr10:018608530 0 W/18608530-18608530 FN580-S Single Base Substitution C-A INTRON HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN772-S.SNP.10:18610391 chr10:018610391 0 W/18610391-18610391 FN772-S Single Base Substitution T-C INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-199.SNP.10:18611944 chr10:018611944 0 W/18611944-18611944 FN-199 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g34880 ulp1 protease family, C-terminal catalytic domain containing protein, expressed SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-131.SNP.10:18612203 chr10:018612203 0 W/18612203-18612203 FN-131 Single Base Substitution T-A INTRON HOMO SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2593-S.SNP.10:18614218 chr10:018614218 0 W/18614218-18614218 FN2593-S SNP C -> T AC=2;AN=186;BQB=0.358681;DP=3273;DP4=1467,1587,18,27;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.73065e-25;MQSB=0.993183;RPB=0.956215;SGB=151.598;VDB=0.186678;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R970K|1202|LOC_Os10g34884|protein_coding|CODING|LOC_Os10g34884.1|14|1) FN3909-S.SNP.10:18614263 chr10:018614263 0 W/18614263-18614263 FN3909-S SNP T -> A AC=2;AN=158;BQB=0.985666;DP=2438;DP4=1090,1224,20,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.35226e-21;MQSB=0.999959;RPB=0.996179;SGB=111.571;VDB=0.635531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E955V|1202|LOC_Os10g34884|protein_coding|CODING|LOC_Os10g34884.1|14|1) FN2742-S.SNP.10:18616433 chr10:018616433 0 W/18616433-18616433 FN2742-S SNP T -> C AC=2;AN=200;BQB=0.688816;DP=3994;DP4=2042,1774,20,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31163e-20;MQSB=0.967109;RPB=0.670768;SGB=164.789;VDB=0.150352;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I344V|1202|LOC_Os10g34884|protein_coding|CODING|LOC_Os10g34884.1|10|1) FN692-S.SNP.10:18618366 chr10:018618366 0 W/18618366-18618366 FN692-S Single Base Substitution C-T INTRON HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN692-S.SNP.10:18618367 chr10:018618367 0 W/18618367-18618367 FN692-S Single Base Substitution A-T INTRON HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN1536-S.SNP.10:18620450 chr10:018620450 0 W/18620450-18620450 FN1536-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g34884 RIPER7 - Ripening-related family protein precursor, expressed SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN527-S.SNP.10:18633148 chr10:018633148 0 W/18633148-18633148 FN527-S Single Base Substitution A-G INTERGENIC HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN-212.SNP.10:18640127 chr10:018640127 0 W/18640127-18640127 FN-212 Single Base Substitution C-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN-279.SNP.10:18644280 chr10:018644280 0 W/18644280-18644280 FN-279 Single Base Substitution G-A INTERGENIC HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2374.SNP.10:18651208 chr10:018651208 0 W/18651208-18651208 FN2374 SNP T -> A AC=1;AN=192;BQB=0.447974;DP=4833;DP4=2175,2413,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.44378e-06;MQSB=0.993147;RPB=0.213868;SGB=18.6565;VDB=0.422093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.10:18655384 chr10:018655384 0 W/18655384-18655384 FN2190-S SNP T -> G AC=1;AN=190;BQB=0.0833001;DP=3373;DP4=615,2478,3,15;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=4.80048e-08;MQSB=0.0234319;RPB=0.999476;SGB=31.3213;VDB=0.240374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.10:18663409 chr10:018663409 0 W/18663409-18663409 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.987063;DP=4357;DP4=1728,2375,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81734e-07;MQSB=0.827198;RPB=0.866742;SGB=39.6545;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.10:18663614 chr10:018663614 0 W/18663614-18663614 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.496367;DP=3839;DP4=1964,1733,23,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.87929e-18;MQSB=0.505408;RPB=0.885763;SGB=88.8416;VDB=0.985057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.10:18668333 chr10:018668333 0 W/18668333-18668333 FN-121 Single Base Substitution C-G INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN724-S.SNP.10:18686965 chr10:018686965 0 W/18686965-18686965 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN2739-S.SNP.10:18688413 chr10:018688413 0 W/18688413-18688413 FN2739-S SNP C -> T AC=1;AN=200;BQB=0.860069;DP=5200;DP4=2433,2444,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.28281e-09;MQSB=0.978369;RPB=0.705977;SGB=68.0801;VDB=0.345082;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R417|442|LOC_Os10g35030|protein_coding|CODING|LOC_Os10g35030.1|11|1),SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R406|431|LOC_Os10g35030|protein_coding|CODING|LOC_Os10g35030.3|11|1),UTR_3_PRIME(MODIFIER||700||381|LOC_Os10g35030|protein_coding|CODING|LOC_Os10g35030.2|11|1) FN-194.SNP.10:18691051 chr10:018691051 0 W/18691051-18691051 FN-194 Single Base Substitution A-C INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN-221.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN-221 Single Base Substitution C-A INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN1304-S.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN1304-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2364.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN2364 SNP C -> A AC=2;AN=192;BQB=0.389153;DP=5028;DP4=2507,2216,14,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.52031e-21;MQSB=0.998854;RPB=0.203502;SGB=154.19;VDB=0.407839;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN3536-S SNP C -> A AC=2;AN=188;BQB=0.9973;DP=2430;DP4=1199,1173,8,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.64194e-09;MQSB=0.999995;RPB=0.986389;SGB=58.0655;VDB=0.35717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN3814-S SNP C -> A AC=2;AN=190;BQB=0.938954;DP=2514;DP4=1207,1225,5,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.61287e-08;MQSB=0.990196;RPB=0.297608;SGB=49.0954;VDB=0.534093;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN728-S Single Base Substitution C-A INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN940-S.SNP.10:18694206 chr10:018694206 0 W/18694206-18694206 FN940-S Single Base Substitution C-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN784-S.SNP.10:18706272 chr10:018706272 0 W/18706272-18706272 FN784-S Single Base Substitution C-T INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN4156-S.SNP.10:18718505 chr10:018718505 0 W/18718505-18718505 FN4156-S SNP G -> C AC=2;AN=170;BQB=0.572623;DP=2779;DP4=1257,1403,14,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.78567e-13;MQSB=0.249467;RPB=0.765379;SGB=127.84;VDB=0.558464;EFF=UTR_3_PRIME(MODIFIER||2687||173|LOC_Os10g35090|protein_coding|CODING|LOC_Os10g35090.1|4|1) FN2771-S.SNP.10:18718866 chr10:018718866 0 W/18718866-18718866 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.875257;DP=4393;DP4=2206,1983,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.00182108;MQB=0.0282359;MQSB=0.89181;RPB=0.343871;SGB=47.3393;VDB=0.0153568;EFF=UTR_3_PRIME(MODIFIER||2326||173|LOC_Os10g35090|protein_coding|CODING|LOC_Os10g35090.1|4|1) FN4249-S.SNP.10:18730464 chr10:018730464 0 W/18730464-18730464 FN4249-S SNP C -> T AC=2;AN=170;BQB=0.878114;DP=2434;DP4=1149,1176,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.48289e-16;MQSB=0.951443;RPB=0.674537;SGB=110.069;VDB=0.630806;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.10:18733908 chr10:018733908 0 W/18733908-18733908 FN1464-S Single Base Substitution T-A INTRON HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2534-S.SNP.10:18742272 chr10:018742272 0 W/18742272-18742272 FN2534-S SNP T -> A AC=1;AN=198;BQB=0.787094;DP=3975;DP4=1692,2063,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.90031e-11;MQSB=0.396591;RPB=0.745897;SGB=118.476;VDB=0.970336;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.10:18746087 chr10:018746087 0 W/18746087-18746087 FN3826-S SNP T -> C AC=1;AN=190;BQB=0.756685;DP=2730;DP4=1063,1514,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.06899e-09;MQSB=0.57639;RPB=0.991414;SGB=31.3213;VDB=0.143887;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.10:18748500 chr10:018748500 0 W/18748500-18748500 FN4153-S SNP A -> G AC=1;AN=170;BQB=0.931668;DP=2620;DP4=1219,1217,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.89037e-07;MQSB=0.961758;RPB=0.800032;SGB=56.7575;VDB=0.987374;EFF=SYNONYMOUS_CODING(LOW|SILENT|caA/caG|Q87|283|LOC_Os10g35130|protein_coding|CODING|LOC_Os10g35130.1|4|1) FN-14.SNP.10:18749169 chr10:018749169 0 W/18749169-18749169 FN-14 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os10g35130 expressed protein SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN-194.SNP.10:18752117 chr10:018752117 0 W/18752117-18752117 FN-194 Single Base Substitution G-A INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3892-S.SNP.10:18752910 chr10:018752910 0 W/18752910-18752910 FN3892-S SNP T -> C AC=1;AN=158;BQB=0.794672;DP=2220;DP4=1063,1010,9,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.48825e-07;MQSB=0.815485;RPB=0.876053;SGB=11.9715;VDB=0.0940842;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L40|143|LOC_Os10g35140|protein_coding|CODING|LOC_Os10g35140.1|5|1) FN3752-S.SNP.10:18758153 chr10:018758153 0 W/18758153-18758153 FN3752-S SNP C -> G AC=2;AN=190;BQB=0.579665;DP=2493;DP4=1284,1072,16,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.89146e-16;MQSB=0.934911;RPB=0.936377;SGB=117.403;VDB=0.856652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.10:18758407 chr10:018758407 0 W/18758407-18758407 FN2165-S SNP G -> A AC=1;AN=168;BQB=0.106348;DP=3340;DP4=2146,1141,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.98362e-06;MQSB=0.957244;RPB=0.999812;SGB=-61.7914;VDB=0.834608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.10:18758577 chr10:018758577 0 W/18758577-18758577 FN1452-S Single Base Substitution C-T INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN3786-S.SNP.10:18759231 chr10:018759231 0 W/18759231-18759231 FN3786-S SNP T -> C AC=1;AN=190;BQB=0.742612;DP=3051;DP4=1471,1485,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.42428e-08;MQSB=0.000530698;RPB=0.794243;SGB=85.5263;VDB=0.404127;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.10:18761633 chr10:018761633 0 W/18761633-18761633 FN1193-S Single Base Substitution A-G INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1320-S.SNP.10:18768490 chr10:018768490 0 W/18768490-18768490 FN1320-S Single Base Substitution G-A INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3700-S.SNP.10:18770812 chr10:018770812 0 W/18770812-18770812 FN3700-S SNP G -> A AC=1;AN=190;BQB=0.917908;DP=2473;DP4=1181,1169,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0101092;MQB=4.01641e-05;MQSB=0.774498;RPB=0.776612;SGB=39.9877;VDB=0.066595;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P622L|689|LOC_Os10g35160|protein_coding|CODING|LOC_Os10g35160.1|1|1) FN2723-S.SNP.10:18791917 chr10:018791917 0 W/18791917-18791917 FN2723-S SNP A -> T AC=1;AN=200;BQB=0.975867;DP=4890;DP4=2358,2311,10,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67718e-09;MQSB=0.697087;RPB=0.815817;SGB=58.8698;VDB=0.964224;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.10:18797838 chr10:018797838 0 W/18797838-18797838 FN_N1-169-1 Single Base Substitution G-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1658-S.SNP.10:18799365 chr10:018799365 0 W/18799365-18799365 FN1658-S SNP G -> A AC=2;AN=188;BQB=0.921363;DP=3755;DP4=1955,1751,27,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.25777e-21;MQSB=0.965656;RPB=0.666871;SGB=74.3988;VDB=0.36105;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D821|875|LOC_Os10g35200|protein_coding|CODING|LOC_Os10g35200.1|16|1) FN4016-S.SNP.10:18800012 chr10:018800012 0 W/18800012-18800012 FN4016-S SNP C -> G AC=2;AN=168;BQB=0.27581;DP=2561;DP4=1165,1212,20,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.04963e-18;MQSB=0.989952;RPB=0.793519;SGB=130.811;VDB=0.727155;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||875|LOC_Os10g35200|protein_coding|CODING|LOC_Os10g35200.1|13|1),INTRON(MODIFIER||||875|LOC_Os10g35200|protein_coding|CODING|LOC_Os10g35200.1|12|1);LOF=(LOC_Os10g35200|LOC_Os10g35200|1|1.00) FN3772-S.SNP.10:18808441 chr10:018808441 0 W/18808441-18808441 FN3772-S SNP T -> A AC=1;AN=190;BQB=0.978157;DP=2401;DP4=1295,1045,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27349e-06;MQSB=0.754532;RPB=0.999607;SGB=25.439;VDB=0.772968;EFF=INTRON(MODIFIER||||406|LOC_Os10g35210|protein_coding|CODING|LOC_Os10g35210.1|1|1) FN2440.SNP.10:18809866 chr10:018809866 0 W/18809866-18809866 FN2440 SNP T -> C AC=1;AN=200;BQB=0.985609;DP=3484;DP4=1197,1874,8,4;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000861079;MQB=0.000172145;MQSB=3.66334e-24;RPB=0.97874;SGB=33.0593;VDB=0.11483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tCg|L227S|406|LOC_Os10g35210|protein_coding|CODING|LOC_Os10g35210.1|3|1) FN_N1-169-1.SNP.10:18810969 chr10:018810969 0 W/18810969-18810969 FN_N1-169-1 Single Base Substitution C-G Homo LOC_Os10g35210 expressed protein SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN3494-S.SNP.10:18813485 chr10:018813485 0 W/18813485-18813485 FN3494-S SNP A -> G AC=1;AN=184;BQB=0.99963;DP=3416;DP4=1972,1339,15,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.78759e-12;MQSB=0.895742;RPB=0.999996;SGB=89.4385;VDB=0.443905;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.10:18817619 chr10:018817619 0 W/18817619-18817619 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.846683;DP=2615;DP4=1139,1405,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.6933e-12;MQSB=0.977226;RPB=0.33305;SGB=62.4192;VDB=0.845662;EFF=INTRON(MODIFIER||||762|LOC_Os10g35220|protein_coding|CODING|LOC_Os10g35220.1|4|1),INTRON(MODIFIER||||677|LOC_Os10g35220|protein_coding|CODING|LOC_Os10g35220.2|4|1) FN1640-S.SNP.10:18819670 chr10:018819670 0 W/18819670-18819670 FN1640-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1640-S.SNP.10:18819671 chr10:018819671 0 W/18819671-18819671 FN1640-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN3797-S.SNP.10:18825916 chr10:018825916 0 W/18825916-18825916 FN3797-S SNP T -> A AC=1;AN=190;BQB=0.244842;DP=1421;DP4=267,855,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.00170864;MQSB=0.00026029;RPB=0.0334663;SGB=5.78296;VDB=0.0138492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.10:18835703 chr10:018835703 0 W/18835703-18835703 FN4160-S SNP C -> T AC=2;AN=170;BQB=0.784403;DP=2745;DP4=1259,1385,13,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.29422e-12;MQSB=0.707334;RPB=0.97977;SGB=118.955;VDB=0.103465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G86S|782|LOC_Os10g35240|protein_coding|CODING|LOC_Os10g35240.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G86S|782|LOC_Os10g35240|protein_coding|CODING|LOC_Os10g35240.2|1|1) FN2352.SNP.10:18836218 chr10:018836218 0 W/18836218-18836218 FN2352 SNP A -> T AC=2;AN=192;BQB=0.207061;DP=5034;DP4=2587,2204,19,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.30076e-17;MQSB=0.11616;RPB=0.646142;SGB=33.9487;VDB=0.403234;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.10:18836218 chr10:018836218 0 W/18836218-18836218 FN431-S Single Base Substitution A-T INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN1707-S.SNP.10:18838180 chr10:018838180 0 W/18838180-18838180 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.544799;DP=2121;DP4=892,1193,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.00141685;MQSB=0.00763507;RPB=0.71055;SGB=43.0708;VDB=0.471439;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H820|883|LOC_Os10g35250|protein_coding|CODING|LOC_Os10g35250.1|8|1) FN3522-S.SNP.10:18840642 chr10:018840642 0 W/18840642-18840642 FN3522-S SNP A -> C AC=1;AN=188;BQB=0.952489;DP=2341;DP4=1203,1068,7,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.77797e-05;MQSB=0.87116;RPB=0.414621;SGB=21.8113;VDB=0.160384;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctG|L567|883|LOC_Os10g35250|protein_coding|CODING|LOC_Os10g35250.1|3|1) FN2723-S.SNP.10:18843404 chr10:018843404 0 W/18843404-18843404 FN2723-S SNP T -> A AC=1;AN=200;BQB=0.96517;DP=3911;DP4=1744,1942,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67768e-06;MQSB=0.356853;RPB=0.0700847;SGB=1.46408;VDB=0.087529;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.10:18849951 chr10:018849951 0 W/18849951-18849951 FN-170 Single Base Substitution C-T INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.10:18849953 chr10:018849953 0 W/18849953-18849953 FN-170 Single Base Substitution A-T INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN786-S.SNP.10:18852446 chr10:018852446 0 W/18852446-18852446 FN786-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os10g35280 nucleolar complex protein 2, putative, expressed SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2110-S.SNP.10:18857508 chr10:018857508 0 W/18857508-18857508 FN2110-S SNP T -> C AC=2;AN=168;BQB=0.611591;DP=2608;DP4=1966,606,18,6;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=0.00022487;MQSB=0.859054;RPB=0.0796689;SGB=72.4869;VDB=0.366085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.10:18863398 chr10:018863398 0 W/18863398-18863398 FN3889-S SNP T -> C AC=1;AN=158;BQB=0.783974;DP=2412;DP4=1134,1129,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.21927e-07;MQSB=0.93995;RPB=0.740614;SGB=37.4429;VDB=0.448898;EFF=INTRON(MODIFIER||||1035|LOC_Os10g35290|protein_coding|CODING|LOC_Os10g35290.1|11|1) FN_955-1.SNP.10:18879699 chr10:018879699 0 W/18879699-18879699 FN_955-1 Single Base Substitution G-A HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3912-S.SNP.10:18881240 chr10:018881240 0 W/18881240-18881240 FN3912-S SNP A -> G AC=1;AN=158;BQB=0.805109;DP=2526;DP4=1247,1200,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.6402e-08;MQSB=0.999938;RPB=0.480738;SGB=47.0672;VDB=0.295418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.10:18881719 chr10:018881719 0 W/18881719-18881719 FN3681-S SNP A -> T AC=1;AN=190;BQB=0.918909;DP=3229;DP4=1569,1471,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.61971e-10;MQSB=0.627978;RPB=0.704261;SGB=31.3213;VDB=0.367594;EFF=INTERGENIC(MODIFIER||||||||||1) FN3949-S.SNP.10:18882311 chr10:018882311 0 W/18882311-18882311 FN3949-S SNP A -> T AC=1;AN=168;BQB=0.00983474;DP=3103;DP4=1229,1399,2,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.27213e-08;MQSB=0.41696;RPB=0.632039;SGB=-277.18;VDB=0.683926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aAg|M74K|206|LOC_Os10g35310|protein_coding|CODING|LOC_Os10g35310.1|2|1) FN2579-S.SNP.10:18885603 chr10:018885603 0 W/18885603-18885603 FN2579-S SNP C -> A AC=1;AN=198;BQB=0.969468;DP=4557;DP4=2083,2228,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.17119e-07;MQSB=0.999998;RPB=0.984447;SGB=24.1541;VDB=0.795035;EFF=INTRON(MODIFIER||||286|LOC_Os10g35330|protein_coding|CODING|LOC_Os10g35330.1|3|1) FN964-S.SNP.10:18900113 chr10:018900113 0 W/18900113-18900113 FN964-S Single Base Substitution G-T INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-386.SNP.10:18901630 chr10:018901630 0 W/18901630-18901630 FN-386 Single Base Substitution A-G INTRON HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN736-S.SNP.10:18902887 chr10:018902887 0 W/18902887-18902887 FN736-S Single Base Substitution T-A INTRON HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN3514-S.SNP.10:18916786 chr10:018916786 0 W/18916786-18916786 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.601404;DP=3099;DP4=1543,1473,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=5.51874e-06;MQSB=0.699446;RPB=0.513409;SGB=62.6088;VDB=0.144465;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.10:18923727 chr10:018923727 0 W/18923727-18923727 FN2210-S SNP C -> A AC=1;AN=190;BQB=0.569933;DP=4528;DP4=2397,1772,15,18;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0700088;MQB=0.496793;MQSB=3.28383e-05;RPB=0.427358;SGB=144.727;VDB=0.211966;EFF=SPLICE_SITE_REGION(LOW||||851|LOC_Os10g35400|protein_coding|CODING|LOC_Os10g35400.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A143|851|LOC_Os10g35400|protein_coding|CODING|LOC_Os10g35400.1|2|1) FN2558-S.SNP.10:18925179 chr10:018925179 0 W/18925179-18925179 FN2558-S SNP T -> C,G AC=7,6;AN=198;BQB=1.99135e-05;DP=3715;DP4=1377,1474,177,110;HOB=0.0519845;ICB=0.288588;MQ=44;MQ0F=0.0131898;MQB=0;MQSB=0.880824;RPB=0;SGB=-1841.72;VDB=0.0342865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Cgg|W482R|851|LOC_Os10g35400|protein_coding|CODING|LOC_Os10g35400.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W482G|851|LOC_Os10g35400|protein_coding|CODING|LOC_Os10g35400.1|3|2) FN1022-S.SNP.10:18925645 chr10:018925645 0 W/18925645-18925645 FN1022-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g35400 retrotransposon protein, putative, unclassified, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3877-S.SNP.10:18926800 chr10:018926800 0 W/18926800-18926800 FN3877-S SNP G -> T AC=1;AN=158;BQB=0.795956;DP=3267;DP4=1344,1790,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=27;MQ0F=0.131925;MQB=0.332477;MQSB=1.1274e-27;RPB=0.999554;SGB=50.9207;VDB=0.520696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.10:18926955 chr10:018926955 0 W/18926955-18926955 FN2326 SNP G -> A AC=1;AN=192;BQB=0.302209;DP=5052;DP4=2363,2437,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0348377;MQB=0.0527676;MQSB=2.77493e-05;RPB=0.190033;SGB=68.2948;VDB=0.957922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.10:18930815 chr10:018930815 0 W/18930815-18930815 FN2685-S SNP G -> A AC=1;AN=200;BQB=0.304636;DP=7602;DP4=4812,2465,11,1;HOB=5e-05;ICB=0.0001005;MQ=33;MQ0F=0.075638;MQB=0.994001;MQSB=0;RPB=0.931468;SGB=33.0593;VDB=0.993626;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I180|1417|LOC_Os10g35412|protein_coding|CODING|LOC_Os10g35412.1|1|1) FN1263-S.SNP.10:18933674 chr10:018933674 0 W/18933674-18933674 FN1263-S Single Base Substitution C-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2091-S.SNP.10:18939685 chr10:018939685 0 W/18939685-18939685 FN2091-S SNP A -> G AC=1;AN=168;BQB=0.0938219;DP=3960;DP4=1939,1989,17,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.01387e-10;MQSB=0.400589;RPB=0.757275;SGB=14.2064;VDB=0.792474;EFF=UTR_3_PRIME(MODIFIER||1505||794|LOC_Os10g35436|protein_coding|CODING|LOC_Os10g35436.1|4|1) FN1316-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN1316-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1402-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN1402-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1471-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN1471-S SNP C -> T AC=2;AN=188;BQB=0.000149149;DP=3148;DP4=1168,1820,23,52;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.74145e-09;MQSB=0.562251;RPB=0.07168;SGB=-878.433;VDB=0.117677;EFF=UTR_3_PRIME(MODIFIER||3137||794|LOC_Os10g35436|protein_coding|CODING|LOC_Os10g35436.1|8|1) FN1531-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN1531-S Single Base Substitution C-T UTR_3_PRIME Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2116-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN2116-S SNP C -> T AC=2;AN=168;BQB=0.000691763;DP=3381;DP4=1285,1942,16,55;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.57781e-11;MQSB=0.639895;RPB=0.793195;SGB=-842.408;VDB=0.515138;EFF=UTR_3_PRIME(MODIFIER||3137||794|LOC_Os10g35436|protein_coding|CODING|LOC_Os10g35436.1|8|1) FN2316.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN2316 SNP C -> T AC=2;AN=192;BQB=0.230985;DP=5028;DP4=2331,2196,30,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.86873e-27;MQSB=0.999444;RPB=0.497142;SGB=-428.98;VDB=0.823358;EFF=UTR_3_PRIME(MODIFIER||3137||794|LOC_Os10g35436|protein_coding|CODING|LOC_Os10g35436.1|8|1) FN3090-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN3090-S SNP C -> T AC=2;AN=184;BQB=0.969776;DP=2865;DP4=1489,1215,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.60766e-14;MQSB=0.855313;RPB=0.254494;SGB=112.047;VDB=0.985096;EFF=UTR_3_PRIME(MODIFIER||3137||794|LOC_Os10g35436|protein_coding|CODING|LOC_Os10g35436.1|8|1) FN473-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN473-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN978-S.SNP.10:18941317 chr10:018941317 0 W/18941317-18941317 FN978-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1284-S.SNP.10:18949619 chr10:018949619 0 W/18949619-18949619 FN1284-S Single Base Substitution A-G INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN908-S.SNP.10:18951419 chr10:018951419 0 W/18951419-18951419 FN908-S Single Base Substitution T-G INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3810-S.SNP.10:18952166 chr10:018952166 0 W/18952166-18952166 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.995494;DP=3138;DP4=1334,1722,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.63177e-05;MQSB=0.197448;RPB=0.54379;SGB=53.6492;VDB=0.304231;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R147|266|LOC_Os10g35440|protein_coding|CODING|LOC_Os10g35440.1|1|1) FN1536-S.SNP.10:18957454 chr10:018957454 0 W/18957454-18957454 FN1536-S Single Base Substitution C-T INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2708-S.SNP.10:18967816 chr10:018967816 0 W/18967816-18967816 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.866051;DP=4913;DP4=2292,2345,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.82983e-15;MQSB=0.94207;RPB=0.612465;SGB=20.7261;VDB=0.969184;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.10:18970877 chr10:018970877 0 W/18970877-18970877 FN972-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN548-S.SNP.10:18973769 chr10:018973769 0 W/18973769-18973769 FN548-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g35450 serine/threonine-protein kinase, putative, expressed SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN437-S.SNP.10:18981430 chr10:018981430 0 W/18981430-18981430 FN437-S Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN730-S.SNP.10:18981564 chr10:018981564 0 W/18981564-18981564 FN730-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g35470 oxidoreductase, putative, expressed SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN3353-S.SNP.10:18983050 chr10:018983050 0 W/18983050-18983050 FN3353-S SNP C -> T AC=1;AN=184;BQB=0.993178;DP=2523;DP4=1173,1266,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.09918e-12;MQSB=0.985199;RPB=0.175223;SGB=84.9167;VDB=0.114283;EFF=INTRON(MODIFIER||||321|LOC_Os10g35470|protein_coding|CODING|LOC_Os10g35470.1|4|1) FN1228-S.SNP.10:18991902 chr10:018991902 0 W/18991902-18991902 FN1228-S Single Base Substitution C-T INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2244-S.SNP.10:18997864 chr10:018997864 0 W/18997864-18997864 FN2244-S SNP G -> A AC=2;AN=190;BQB=0.351578;DP=2688;DP4=1289,1095,8,13;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.190476;MQB=0.993512;MQSB=0;RPB=0.611557;SGB=64.5316;VDB=0.330079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P62L|107|LOC_Os10g35510|protein_coding|CODING|LOC_Os10g35510.1|1|1) FN2532-S.SNP.10:19000472 chr10:019000472 0 W/19000472-19000472 FN2532-S SNP A -> T AC=2;AN=198;BQB=0.491749;DP=4347;DP4=2144,1891,21,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.09053e-25;MQSB=0.989153;RPB=0.775268;SGB=144.408;VDB=0.215305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K246N|318|LOC_Os10g35520|protein_coding|CODING|LOC_Os10g35520.1|5|1) FN2742-S.SNP.10:19003396 chr10:019003396 0 W/19003396-19003396 FN2742-S SNP T -> G AC=2;AN=200;BQB=0.996764;DP=5045;DP4=2549,2280,20,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.33322e-24;MQSB=0.655536;RPB=0.608645;SGB=201.63;VDB=0.280649;EFF=INTRON(MODIFIER||||268|LOC_Os10g35530|protein_coding|CODING|LOC_Os10g35530.1|3|1),INTRON(MODIFIER||||268|LOC_Os10g35530|protein_coding|CODING|LOC_Os10g35530.2|2|1) FN3546-S.SNP.10:19009757 chr10:019009757 0 W/19009757-19009757 FN3546-S SNP G -> A AC=1;AN=188;BQB=0.427984;DP=2732;DP4=1426,1249,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16413e-05;MQSB=0.617515;RPB=0.785569;SGB=32.441;VDB=0.534093;EFF=UTR_3_PRIME(MODIFIER||1342||1039|LOC_Os10g35550|protein_coding|CODING|LOC_Os10g35550.1|2|1) FN-390.SNP.10:19010219 chr10:019010219 0 W/19010219-19010219 FN-390 Single Base Substitution G-C INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN-56.SNP.10:19011758 chr10:019011758 0 W/19011758-19011758 FN-56 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g35550 pre-mRNA-processing factor 6, putative, expressed SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN-133.SNP.10:19021019 chr10:019021019 0 W/19021019-19021019 FN-133 Single Base Substitution C-A INTRON HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN3509-S.SNP.10:19021659 chr10:019021659 0 W/19021659-19021659 FN3509-S SNP T -> G AC=1;AN=188;BQB=0.988333;DP=2974;DP4=1356,1513,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.49047e-09;MQSB=0.99233;RPB=0.956604;SGB=39.5276;VDB=0.843751;EFF=INTRON(MODIFIER||||1301|LOC_Os10g35560|protein_coding|CODING|LOC_Os10g35560.1|10|1),INTRON(MODIFIER||||1301|LOC_Os10g35560|protein_coding|CODING|LOC_Os10g35560.2|10|1) FN468-S.SNP.10:19021951 chr10:019021951 0 W/19021951-19021951 FN468-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g35560 expressed protein SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3372-S.SNP.10:19022184 chr10:019022184 0 W/19022184-19022184 FN3372-S SNP G -> A AC=2;AN=184;BQB=0.988535;DP=3107;DP4=1634,1313,12,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.27152e-17;MQSB=0.998185;RPB=0.442263;SGB=56.0583;VDB=0.660644;EFF=INTRON(MODIFIER||||1301|LOC_Os10g35560|protein_coding|CODING|LOC_Os10g35560.1|11|1),INTRON(MODIFIER||||1301|LOC_Os10g35560|protein_coding|CODING|LOC_Os10g35560.2|11|1) FN900-S.SNP.10:19022673 chr10:019022673 0 W/19022673-19022673 FN900-S Single Base Substitution T-A INTRON HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN900-S.SNP.10:19026145 chr10:019026145 0 W/19026145-19026145 FN900-S Single Base Substitution T-C INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN3545-S.SNP.10:19027143 chr10:019027143 0 W/19027143-19027143 FN3545-S SNP C -> T AC=1;AN=188;BQB=0.919033;DP=3177;DP4=1567,1513,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=6.76425e-06;MQSB=0.000228582;RPB=0.717655;SGB=67.1521;VDB=0.915758;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.10:19027668 chr10:019027668 0 W/19027668-19027668 FN4177-S SNP G -> A AC=2;AN=170;BQB=0.957389;DP=2299;DP4=1084,1109,11,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.17777e-11;MQSB=0.997532;RPB=0.160433;SGB=83.4133;VDB=0.00196237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.10:19049756 chr10:019049756 0 W/19049756-19049756 FN2730-S SNP T -> A AC=1;AN=200;BQB=0.750089;DP=5096;DP4=2719,2187,8,7;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=9.0846e-05;MQSB=1.90044e-06;RPB=0.979869;SGB=24.2746;VDB=0.70368;EFF=INTERGENIC(MODIFIER||||||||||1) FN794-S.SNP.10:19053256 chr10:019053256 0 W/19053256-19053256 FN794-S Single Base Substitution T-A INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN2297.SNP.10:19057634 chr10:019057634 0 W/19057634-19057634 FN2297 SNP C -> T AC=1;AN=192;BQB=0.999422;DP=4649;DP4=2273,2152,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0;MQB=0.00580637;MQSB=0.208234;RPB=0.884945;SGB=43.3444;VDB=0.875672;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T165I|506|LOC_Os10g35640|protein_coding|CODING|LOC_Os10g35640.1|2|1) FN803-S.SNP.10:19061332 chr10:019061332 0 W/19061332-19061332 FN803-S Single Base Substitution T-C INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1202-S.SNP.10:19062181 chr10:019062181 0 W/19062181-19062181 FN1202-S Single Base Substitution T-C INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1288-S.SNP.10:19075517 chr10:019075517 0 W/19075517-19075517 FN1288-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1288-S.SNP.10:19075518 chr10:019075518 0 W/19075518-19075518 FN1288-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN490-S.SNP.10:19082288 chr10:019082288 0 W/19082288-19082288 FN490-S Single Base Substitution A-G INTERGENIC HOMO SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN3347-S.SNP.10:19092610 chr10:019092610 0 W/19092610-19092610 FN3347-S SNP T -> A AC=1;AN=184;BQB=0.629503;DP=3623;DP4=2097,1212,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.00302e-05;MQSB=0.00759068;RPB=0.161762;SGB=-38.1432;VDB=0.0802659;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.10:19093685 chr10:019093685 0 W/19093685-19093685 FN752-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g35710 expressed protein SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2422.SNP.10:19108009 chr10:019108009 0 W/19108009-19108009 FN2422 SNP G -> A AC=2;AN=200;BQB=0.967336;DP=2004;DP4=853,1021,6,12;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0;MQB=0.554928;MQSB=0.905797;RPB=0.392928;SGB=32.0901;VDB=0.000190912;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.10:19121727 chr10:019121727 0 W/19121727-19121727 FN2484 SNP C -> G AC=2;AN=200;BQB=0.953706;DP=4301;DP4=1915,2089,22,23;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=8.34227e-17;MQSB=0.000416587;RPB=0.996612;SGB=52.8295;VDB=0.689989;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.10:19122106 chr10:019122106 0 W/19122106-19122106 FN3416-S SNP A -> G AC=2;AN=184;BQB=0.999173;DP=2711;DP4=1444,1198,8,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.48675e-10;MQSB=0.82809;RPB=0.997878;SGB=66.8296;VDB=0.787351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.10:19122587 chr10:019122587 0 W/19122587-19122587 FN2169-S SNP C -> A AC=1;AN=168;BQB=0.236848;DP=3724;DP4=1967,1724,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.04928e-06;MQSB=0.193251;RPB=0.719003;SGB=-38.9357;VDB=0.2211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.10:19134489 chr10:019134489 0 W/19134489-19134489 FN2304 SNP T -> C AC=1;AN=192;BQB=0.946379;DP=5278;DP4=2833,2133,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.19183e-07;MQSB=0.234263;RPB=0.957038;SGB=39.78;VDB=0.223026;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.10:19136257 chr10:019136257 0 W/19136257-19136257 FN4202-S SNP C -> T AC=1;AN=170;BQB=0.936075;DP=2340;DP4=1147,1106,14,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.70171e-11;MQSB=0.740342;RPB=0.998315;SGB=114.512;VDB=0.293978;EFF=INTRON(MODIFIER||||87|LOC_Os10g35780|protein_coding|CODING|LOC_Os10g35780.1|1|1) FN4300-S.SNP.10:19147326 chr10:019147326 0 W/19147326-19147326 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.944786;DP=2390;DP4=1338,985,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00022068;MQSB=0.964911;RPB=0.670403;SGB=30.1021;VDB=0.612706;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I240|363|LOC_Os10g35800|protein_coding|CODING|LOC_Os10g35800.1|1|1) FN2719-S.SNP.10:19148426 chr10:019148426 0 W/19148426-19148426 FN2719-S SNP T -> A AC=1;AN=200;BQB=0.663444;DP=5114;DP4=2530,2255,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.38135e-15;MQSB=0.944659;RPB=0.575928;SGB=50.3263;VDB=0.54012;EFF=UTR_3_PRIME(MODIFIER||26||236|LOC_Os10g35810|protein_coding|CODING|LOC_Os10g35810.1|3|1),UTR_3_PRIME(MODIFIER||633||363|LOC_Os10g35800|protein_coding|CODING|LOC_Os10g35800.1|2|1) FN2366.SNP.10:19149976 chr10:019149976 0 W/19149976-19149976 FN2366 SNP T -> C AC=1;AN=192;BQB=0.997712;DP=5122;DP4=2407,2336,20,7;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00156189;MQB=0.0156381;MQSB=0.0543563;RPB=0.848951;SGB=-8.56084;VDB=0.902889;EFF=INTRON(MODIFIER||||236|LOC_Os10g35810|protein_coding|CODING|LOC_Os10g35810.1|1|1) FN_826-4-1.SNP.10:19154101 chr10:019154101 0 W/19154101-19154101 FN_826-4-1 Single Base Substitution G-A HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN-401.SNP.10:19156520 chr10:019156520 0 W/19156520-19156520 FN-401 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g35830 expressed protein SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN-401.SNP.10:19156521 chr10:019156521 0 W/19156521-19156521 FN-401 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g35830 expressed protein SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN2188-S.SNP.10:19161943 chr10:019161943 0 W/19161943-19161943 FN2188-S SNP A -> G AC=2;AN=190;BQB=0.74273;DP=3821;DP4=1746,1624,20,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71463e-22;MQSB=0.647733;RPB=0.425799;SGB=185.712;VDB=0.622435;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S77P|537|LOC_Os10g35840|protein_coding|CODING|LOC_Os10g35840.1|1|1) FN3841-S.SNP.10:19197185 chr10:019197185 0 W/19197185-19197185 FN3841-S SNP C -> T AC=1;AN=190;BQB=0.99735;DP=3667;DP4=1682,1860,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.37683e-07;MQSB=0.999933;RPB=0.755935;SGB=15.9981;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.10:19199120 chr10:019199120 0 W/19199120-19199120 FN1441-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1658-S.SNP.10:19201891 chr10:019201891 0 W/19201891-19201891 FN1658-S SNP T -> C AC=2;AN=188;BQB=0.995136;DP=3695;DP4=1778,1871,16,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.5162e-16;MQSB=0.999676;RPB=0.0212087;SGB=-3.59057;VDB=0.223137;EFF=UTR_3_PRIME(MODIFIER||5||577|LOC_Os10g35940|protein_coding|CODING|LOC_Os10g35940.1|15|1),UTR_3_PRIME(MODIFIER||5||293|LOC_Os10g35940|protein_coding|CODING|LOC_Os10g35940.2|14|1) FN2535-S.SNP.10:19209662 chr10:019209662 0 W/19209662-19209662 FN2535-S SNP A -> T AC=1;AN=198;BQB=0.399243;DP=4578;DP4=2222,2174,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.154e-08;MQSB=0.822031;RPB=0.360197;SGB=67.9293;VDB=0.167305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2330.SNP.10:19211324 chr10:019211324 0 W/19211324-19211324 FN2330 SNP A -> G AC=1;AN=192;BQB=0.999182;DP=4727;DP4=2427,2018,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.3078e-11;MQSB=0.484246;RPB=0.976898;SGB=90.2896;VDB=0.287297;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.10:19214922 chr10:019214922 0 W/19214922-19214922 FN3558-S SNP C -> T AC=1;AN=188;BQB=0.726003;DP=4432;DP4=1809,2493,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.80085e-09;MQSB=0.973483;RPB=0.956983;SGB=57.244;VDB=0.78366;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A413V|553|LOC_Os10g35950|protein_coding|CODING|LOC_Os10g35950.1|1|1) FN1394-S.SNP.10:19242552 chr10:019242552 0 W/19242552-19242552 FN1394-S Single Base Substitution A-G INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN951-S.SNP.10:19245918 chr10:019245918 0 W/19245918-19245918 FN951-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN2366.SNP.10:19248525 chr10:019248525 0 W/19248525-19248525 FN2366 SNP G -> A AC=1;AN=192;BQB=0.894482;DP=4787;DP4=2116,2341,11,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.32191e-13;MQSB=0.622322;RPB=0.917137;SGB=18.3052;VDB=0.0270423;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.10:19257694 chr10:019257694 0 W/19257694-19257694 FN4066-S SNP A -> C AC=1;AN=168;BQB=0.999359;DP=2834;DP4=1301,1339,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.10458e-05;MQSB=0.621161;RPB=0.136741;SGB=10.0307;VDB=0.525878;EFF=INTRON(MODIFIER||||230|LOC_Os10g36030|protein_coding|CODING|LOC_Os10g36030.1|1|1) FN3659-S.SNP.10:19258197 chr10:019258197 0 W/19258197-19258197 FN3659-S SNP G -> T AC=1;AN=190;BQB=0.899986;DP=2157;DP4=977,1090,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.76431e-07;MQSB=0.989184;RPB=0.981908;SGB=36.1006;VDB=0.478855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.10:19265356 chr10:019265356 0 W/19265356-19265356 FN3439-S SNP A -> G AC=2;AN=184;BQB=0.910946;DP=2718;DP4=1363,1172,20,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.17546e-13;MQSB=0.754353;RPB=0.560651;SGB=23.542;VDB=0.550778;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.10:19266105 chr10:019266105 0 W/19266105-19266105 FN4023-S SNP G -> A AC=1;AN=168;BQB=0.894853;DP=2667;DP4=1144,1406,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.41757e-05;MQSB=0.946399;RPB=0.849891;SGB=34.4498;VDB=0.846429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1116-S.SNP.10:19269345 chr10:019269345 0 W/19269345-19269345 FN1116-S Single Base Substitution T-C INTERGENIC HOMO SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN499-S.SNP.10:19273482 chr10:019273482 0 W/19273482-19273482 FN499-S Single Base Substitution C-G INTERGENIC HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN995-S.SNP.10:19280804 chr10:019280804 0 W/19280804-19280804 FN995-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g36060 protein transport protein-related, putative, expressed SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN-237.SNP.10:19285214 chr10:019285214 0 W/19285214-19285214 FN-237 Single Base Substitution T-G INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN-204.SNP.10:19287542 chr10:019287542 0 W/19287542-19287542 FN-204 Single Base Substitution T-A INTERGENIC HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-177.SNP.10:19289658 chr10:019289658 0 W/19289658-19289658 FN-177 Single Base Substitution C-A INTERGENIC HOMO SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1025-S.SNP.10:19289658 chr10:019289658 0 W/19289658-19289658 FN1025-S Single Base Substitution C-A INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN-377.SNP.10:19291226 chr10:019291226 0 W/19291226-19291226 FN-377 Single Base Substitution G-A INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN2662-S.SNP.10:19293376 chr10:019293376 0 W/19293376-19293376 FN2662-S SNP A -> C AC=1;AN=200;BQB=0.965325;DP=2383;DP4=1921,378,9,3;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0075535;MQB=0.0067899;MQSB=2.22473e-06;RPB=0.987101;SGB=33.0593;VDB=0.634931;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.10:19294465 chr10:019294465 0 W/19294465-19294465 FN-206 Single Base Substitution C-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2627-S.SNP.10:19295666 chr10:019295666 0 W/19295666-19295666 FN2627-S SNP C -> T AC=2;AN=200;BQB=0.957701;DP=5429;DP4=2484,2635,22,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.5973e-21;MQSB=0.997285;RPB=0.960633;SGB=123.188;VDB=0.354569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.10:19297321 chr10:019297321 0 W/19297321-19297321 FN2555-S SNP G -> A AC=1;AN=188;BQB=0.433175;DP=3724;DP4=1841,1693,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.59403e-06;MQSB=0.999407;RPB=0.990787;SGB=35.7638;VDB=0.424206;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.10:19298228 chr10:019298228 0 W/19298228-19298228 FN3967-S SNP C -> G AC=2;AN=182;BQB=0.895682;DP=2929;DP4=1398,1392,29,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.44552e-28;MQSB=0.856945;RPB=0.194214;SGB=223.562;VDB=0.0347322;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.10:19299072 chr10:019299072 0 W/19299072-19299072 FN2335 SNP A -> G AC=1;AN=192;BQB=0.531936;DP=4008;DP4=1751,1998,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=5.27449e-06;MQSB=3.37008e-06;RPB=0.991008;SGB=-10.2539;VDB=0.48759;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.10:19304573 chr10:019304573 0 W/19304573-19304573 FN3501-S SNP C -> A AC=1;AN=188;BQB=0.964978;DP=2730;DP4=1313,1348,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.63178e-06;MQSB=0.995748;RPB=0.890117;SGB=35.3493;VDB=0.76965;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.10:19308511 chr10:019308511 0 W/19308511-19308511 FN323-S Single Base Substitution C-T INTERGENIC HOMO SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2752-S.SNP.10:19310054 chr10:019310054 0 W/19310054-19310054 FN2752-S SNP C -> T AC=2;AN=200;BQB=0.8656;DP=4688;DP4=2431,1943,20,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.16809e-20;MQSB=0.901064;RPB=0.653201;SGB=150.973;VDB=0.972502;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.10:19311610 chr10:019311610 0 W/19311610-19311610 FN983-S Single Base Substitution T-C INTRON HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2278-S.SNP.10:19311907 chr10:019311907 0 W/19311907-19311907 FN2278-S SNP G -> A AC=1;AN=190;BQB=0.989496;DP=4418;DP4=2118,1994,13,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000226347;MQB=1.97319e-15;MQSB=0.704048;RPB=0.595783;SGB=121.957;VDB=0.300618;EFF=INTRON(MODIFIER||||90|LOC_Os10g36130|protein_coding|CODING|LOC_Os10g36130.1|1|1) FN2765-S.SNP.10:19318754 chr10:019318754 0 W/19318754-19318754 FN2765-S SNP G -> A AC=1;AN=188;BQB=0.256605;DP=3154;DP4=1674,1257,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00887762;MQB=0.270158;MQSB=0.177929;RPB=0.323181;SGB=58.7391;VDB=0.0572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A444T|1068|LOC_Os10g36140|protein_coding|CODING|LOC_Os10g36140.1|2|1) FN1467-S.SNP.10:19325111 chr10:019325111 0 W/19325111-19325111 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1467-S.SNP.10:19325112 chr10:019325112 0 W/19325112-19325112 FN1467-S Single Base Substitution G-A INTERGENIC HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1446-S.SNP.10:19326489 chr10:019326489 0 W/19326489-19326489 FN1446-S Single Base Substitution T-G INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2473.SNP.10:19327574 chr10:019327574 0 W/19327574-19327574 FN2473 SNP G -> A AC=1;AN=200;BQB=0.87714;DP=4884;DP4=2258,2369,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.65818e-07;MQSB=0.982853;RPB=0.919404;SGB=-0.141083;VDB=0.987825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.10:19346978 chr10:019346978 0 W/19346978-19346978 FN1230-S Single Base Substitution T-G SPLICE_SITE_REGION HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2348.SNP.10:19348823 chr10:019348823 0 W/19348823-19348823 FN2348 SNP C -> T AC=1;AN=192;BQB=0.37011;DP=4998;DP4=2603,2075,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.23682e-12;MQSB=0.870183;RPB=0.999996;SGB=41.7357;VDB=0.517563;EFF=INTERGENIC(MODIFIER||||||||||1) FN403-S.SNP.10:19349413 chr10:019349413 0 W/19349413-19349413 FN403-S Single Base Substitution T-C INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN995-S.SNP.10:19350880 chr10:019350880 0 W/19350880-19350880 FN995-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN-293.SNP.10:19357174 chr10:019357174 0 W/19357174-19357174 FN-293 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g36210 valyl-tRNA synthetase, putative, expressed SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN2572-S.SNP.10:19358309 chr10:019358309 0 W/19358309-19358309 FN2572-S SNP A -> C AC=1;AN=198;BQB=0.557593;DP=3953;DP4=1876,1840,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20709e-14;MQSB=0.934805;RPB=0.911696;SGB=127.666;VDB=0.519426;EFF=SPLICE_SITE_REGION(LOW||||1056|LOC_Os10g36210|protein_coding|CODING|LOC_Os10g36210.1|9|1),INTRON(MODIFIER||||1056|LOC_Os10g36210|protein_coding|CODING|LOC_Os10g36210.1|9|1) FN2572-S.SNP.10:19358309 chr10:019358309 0 W/19358309-19358309 FN2572-S Single Base Substitution A-C SPLICE_SITE_REGION HOMO SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3550-S.SNP.10:19366576 chr10:019366576 0 W/19366576-19366576 FN3550-S SNP C -> T AC=2;AN=188;BQB=0.998924;DP=4179;DP4=2170,1926,22,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.02138e-25;MQSB=0.854689;RPB=0.999841;SGB=185.278;VDB=0.445082;EFF=INTRON(MODIFIER||||1242|LOC_Os10g36229|protein_coding|CODING|LOC_Os10g36229.1|2|1) FN3302-S.SNP.10:19370831 chr10:019370831 0 W/19370831-19370831 FN3302-S SNP C -> T AC=1;AN=184;BQB=0.707366;DP=2351;DP4=1336,901,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=3.43408e-05;MQSB=0.000154565;RPB=0.85599;SGB=35.7479;VDB=0.397552;EFF=INTRON(MODIFIER||||1242|LOC_Os10g36229|protein_coding|CODING|LOC_Os10g36229.1|8|1) FN1104-S.SNP.10:19384345 chr10:019384345 0 W/19384345-19384345 FN1104-S Single Base Substitution G-A INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. 703-1.SNP.10:19384947 chr10:019384947 0 W/19384947-19384947 703-1 Single Base Substitution A-T INTERGENIC Homo SNo: 1450, Mutant_ID: 703-1, Generation: M2, Mutations: 30, Genes: 28, Seed availability: No. 703-2.SNP.10:19384947 chr10:019384947 0 W/19384947-19384947 703-2 Single Base Substitution A-T INTERGENIC Homo SNo: 1451, Mutant_ID: 703-2, Generation: M2, Mutations: 24, Genes: 23, Seed availability: Yes. 703-3.SNP.10:19384947 chr10:019384947 0 W/19384947-19384947 703-3 Single Base Substitution A-T INTERGENIC Homo SNo: 1452, Mutant_ID: 703-3, Generation: M2, Mutations: 24, Genes: 38, Seed availability: Yes. FN1114-S.SNP.10:19388055 chr10:019388055 0 W/19388055-19388055 FN1114-S Single Base Substitution A-C INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN684-S.SNP.10:19390956 chr10:019390956 0 W/19390956-19390956 FN684-S Single Base Substitution A-T INTRON HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN2439.SNP.10:19391871 chr10:019391871 0 W/19391871-19391871 FN2439 SNP C -> A AC=1;AN=200;BQB=0.999657;DP=4794;DP4=2227,2316,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23823e-07;MQSB=0.979296;RPB=0.785539;SGB=54.2646;VDB=0.286399;EFF=UTR_5_PRIME(MODIFIER||2406||707|LOC_Os10g36270|protein_coding|CODING|LOC_Os10g36270.1|2|1) FN2439.SNP.10:19391873 chr10:019391873 0 W/19391873-19391873 FN2439 SNP A -> G AC=1;AN=200;BQB=0.138365;DP=4834;DP4=2152,2338,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04157e-07;MQSB=0.852855;RPB=0.999991;SGB=43.8747;VDB=0.354724;EFF=UTR_5_PRIME(MODIFIER||2404||707|LOC_Os10g36270|protein_coding|CODING|LOC_Os10g36270.1|2|1) FN2754-S.SNP.10:19402610 chr10:019402610 0 W/19402610-19402610 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.865969;DP=4648;DP4=2286,2061,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.59021e-14;MQSB=0.987814;RPB=0.999742;SGB=95.7111;VDB=0.039237;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.10:19409520 chr10:019409520 0 W/19409520-19409520 FN744-S Single Base Substitution G-A INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4032-S.SNP.10:19412164 chr10:019412164 0 W/19412164-19412164 FN4032-S SNP C -> T AC=2;AN=168;BQB=0.890678;DP=2739;DP4=1384,1179,30,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.02087e-24;MQSB=0.918564;RPB=0.645347;SGB=169.517;VDB=0.685392;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.10:19412457 chr10:019412457 0 W/19412457-19412457 FN771-S Single Base Substitution A-G INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2288.SNP.10:19417311 chr10:019417311 0 W/19417311-19417311 FN2288 SNP T -> A AC=1;AN=192;BQB=0.886762;DP=5081;DP4=2419,2253,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.93763e-07;MQSB=0.977591;RPB=0.184315;SGB=-34.4565;VDB=0.308651;EFF=INTRON(MODIFIER||||275|LOC_Os10g36350|protein_coding|CODING|LOC_Os10g36350.1|7|1),INTRON(MODIFIER||||240|LOC_Os10g36350|protein_coding|CODING|LOC_Os10g36350.2|7|1) FN4039-S.SNP.10:19417671 chr10:019417671 0 W/19417671-19417671 FN4039-S SNP G -> C AC=1;AN=168;BQB=0.428973;DP=2644;DP4=1452,1083,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93148e-09;MQSB=0.943453;RPB=0.997875;SGB=48.4712;VDB=0.695188;EFF=INTRON(MODIFIER||||275|LOC_Os10g36350|protein_coding|CODING|LOC_Os10g36350.1|5|1),INTRON(MODIFIER||||240|LOC_Os10g36350|protein_coding|CODING|LOC_Os10g36350.2|5|1) FN1731-S.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN1731-S SNP C -> T AC=2;AN=188;BQB=0.553564;DP=3025;DP4=2074,874,37,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.00899e-13;MQSB=0.941935;RPB=0.637487;SGB=-352.467;VDB=0.616491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN2308 SNP C -> T AC=1;AN=192;BQB=0.903886;DP=4956;DP4=2333,2198,16,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.26168e-05;MQSB=0.599464;RPB=0.351457;SGB=-10.8182;VDB=0.378637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN2419 SNP C -> T AC=1;AN=200;BQB=0.654147;DP=4758;DP4=2293,2047,12,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00105083;MQSB=0.919385;RPB=0.0331821;SGB=65.5058;VDB=0.00732821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN3310-S SNP C -> T AC=2;AN=184;BQB=0.846998;DP=2976;DP4=1307,1528,17,17;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=6.95202e-08;MQSB=0.0994179;RPB=0.997043;SGB=71.1891;VDB=0.174116;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN4119-S SNP C -> T AC=2;AN=182;BQB=0.47351;DP=2671;DP4=1155,1411,10,6;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0;MQB=0.001439;MQSB=0.914947;RPB=0.433055;SGB=46.1603;VDB=0.66157;EFF=INTERGENIC(MODIFIER||||||||||1) FN845-S.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN845-S Single Base Substitution C-T INTERGENIC HOMO SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN881-S.SNP.10:19418877 chr10:019418877 0 W/19418877-19418877 FN881-S Single Base Substitution C-T INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2533-S.SNP.10:19420732 chr10:019420732 0 W/19420732-19420732 FN2533-S SNP A -> G AC=2;AN=198;BQB=0.431214;DP=3591;DP4=1872,1544,13,10;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=4.0185e-13;MQSB=0.966004;RPB=0.871075;SGB=72.5051;VDB=0.00847303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.10:19420734 chr10:019420734 0 W/19420734-19420734 FN2533-S SNP A -> T AC=2;AN=198;BQB=0.996771;DP=3604;DP4=1886,1564,14,9;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.96592e-13;MQSB=0.943259;RPB=0.999918;SGB=100.095;VDB=0.00868233;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.10:19421490 chr10:019421490 0 W/19421490-19421490 FN2175-S SNP A -> T AC=1;AN=168;BQB=0.00018911;DP=4335;DP4=2038,2253,16,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3932e-07;MQSB=0.902717;RPB=0.895179;SGB=-75.914;VDB=0.832702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.10:19423274 chr10:019423274 0 W/19423274-19423274 FN2214-S SNP A -> T AC=1;AN=190;BQB=0.828399;DP=4551;DP4=2031,2203,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.09296e-12;MQSB=0.117015;RPB=0.615641;SGB=99.1879;VDB=0.725566;EFF=INTERGENIC(MODIFIER||||||||||1) FN1128-S.SNP.10:19424978 chr10:019424978 0 W/19424978-19424978 FN1128-S Single Base Substitution C-T INTERGENIC HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1128-S.SNP.10:19424979 chr10:019424979 0 W/19424979-19424979 FN1128-S Single Base Substitution A-T INTERGENIC HOMO SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN4165-S.SNP.10:19430165 chr10:019430165 0 W/19430165-19430165 FN4165-S SNP G -> A AC=2;AN=170;BQB=0.581626;DP=2690;DP4=1277,1343,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.84711e-10;MQSB=0.922269;RPB=0.975057;SGB=96.7413;VDB=0.596387;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.10:19438868 chr10:019438868 0 W/19438868-19438868 FN433-S Single Base Substitution A-G INTRON HOMO SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN2204-S.SNP.10:19471291 chr10:019471291 0 W/19471291-19471291 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.964346;DP=4875;DP4=2474,2141,20,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92768e-19;MQSB=0.756114;RPB=0.6231;SGB=103.624;VDB=0.626758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M308I|313|LOC_Os10g36420|protein_coding|CODING|LOC_Os10g36420.1|7|1) FN-210.SNP.10:19475298 chr10:019475298 0 W/19475298-19475298 FN-210 Single Base Substitution T-C UTR_5_PRIME HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN2463.SNP.10:19477388 chr10:019477388 0 W/19477388-19477388 FN2463 SNP T -> C AC=1;AN=200;BQB=0.868243;DP=4816;DP4=2434,2099,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55176e-17;MQSB=0.927127;RPB=0.912255;SGB=123.342;VDB=0.240038;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.10:19483247 chr10:019483247 0 W/19483247-19483247 FN2671-S SNP A -> T AC=1;AN=200;BQB=0.983328;DP=4581;DP4=2454,1773,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218293;MQB=1.12269e-06;MQSB=0.536412;RPB=0.928617;SGB=11.2488;VDB=0.851509;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.10:19483248 chr10:019483248 0 W/19483248-19483248 FN2671-S SNP G -> T AC=1;AN=200;BQB=0.25021;DP=4555;DP4=2339,1833,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219539;MQB=1.20183e-06;MQSB=0.458289;RPB=0.677763;SGB=25.849;VDB=0.649936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.10:19497644 chr10:019497644 0 W/19497644-19497644 FN2479 SNP C -> T AC=1;AN=200;BQB=0.083407;DP=3550;DP4=1783,1507,8,9;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.135493;MQB=0.544734;MQSB=0;RPB=0.751074;SGB=51.0851;VDB=0.831983;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R682H|987|LOC_Os10g36440|protein_coding|CODING|LOC_Os10g36440.1|2|1) FN2380.SNP.10:19501493 chr10:019501493 0 W/19501493-19501493 FN2380 SNP T -> A AC=1;AN=192;BQB=0.918273;DP=7370;DP4=3080,3697,2,24;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00434193;MQB=1.83291e-12;MQSB=0;RPB=0.413946;SGB=51.9931;VDB=0.441165;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.10:19502870 chr10:019502870 0 W/19502870-19502870 FN747-S Single Base Substitution C-A INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2574-S.SNP.10:19519145 chr10:019519145 0 W/19519145-19519145 FN2574-S SNP C -> A AC=2;AN=198;BQB=0.785288;DP=3972;DP4=1821,1922,15,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.45487e-11;MQSB=0.998544;RPB=0.857626;SGB=-10.8602;VDB=0.138652;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A840S|1139|LOC_Os10g36490|protein_coding|CODING|LOC_Os10g36490.1|12|1) FN1522-S.SNP.10:19519984 chr10:019519984 0 W/19519984-19519984 FN1522-S Single Base Substitution A-T INTRON Homo SNo: 1274, Mutant_ID: FN1522-S, Generation: M2, Mutations: 64, Genes: 18, Seed availability: Yes. FN1096-S.SNP.10:19533194 chr10:019533194 0 W/19533194-19533194 FN1096-S Single Base Substitution G-A INTERGENIC HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1533-S.SNP.10:19533257 chr10:019533257 0 W/19533257-19533257 FN1533-S Single Base Substitution G-A INTERGENIC HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN3692-S.SNP.10:19533920 chr10:019533920 0 W/19533920-19533920 FN3692-S SNP T -> C AC=1;AN=190;BQB=0.597284;DP=2396;DP4=1382,832,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000219285;MQSB=0.657164;RPB=0.325655;SGB=10.8904;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.10:19534526 chr10:019534526 0 W/19534526-19534526 FN1585-S Single Base Substitution T-C INTRON Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-179.SNP.10:19546145 chr10:019546145 0 W/19546145-19546145 FN-179 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g36530 mutS domain V family protein, expressed SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2575-S.SNP.10:19546145 chr10:019546145 0 W/19546145-19546145 FN2575-S SNP C -> T AC=2;AN=198;BQB=0.982134;DP=4256;DP4=1720,2290,35,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.73329e-37;MQSB=0.948155;RPB=0.321526;SGB=238.499;VDB=0.813158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T443I|550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.1|15|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T443I|550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.2|15|1) FN3776-S.SNP.10:19546145 chr10:019546145 0 W/19546145-19546145 FN3776-S SNP C -> T AC=2;AN=190;BQB=0.595311;DP=2976;DP4=1132,1757,13,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.52296e-18;MQSB=0.996047;RPB=0.688962;SGB=158.388;VDB=0.253875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T443I|550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.1|15|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T443I|550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.2|15|1) FN3844-S.SNP.10:19547110 chr10:019547110 0 W/19547110-19547110 FN3844-S SNP T -> C AC=1;AN=190;BQB=0.887374;DP=2662;DP4=1335,1236,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56681e-05;MQSB=0.878946;RPB=0.929687;SGB=30.8803;VDB=0.0887706;EFF=INTRON(MODIFIER||||550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.1|16|1),INTRON(MODIFIER||||550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.2|16|1) FN2788-S.SNP.10:19547447 chr10:019547447 0 W/19547447-19547447 FN2788-S SNP T -> G AC=1;AN=198;BQB=0.845522;DP=4493;DP4=2157,2017,23,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.07167e-20;MQSB=0.977352;RPB=0.519128;SGB=-90.733;VDB=0.0742257;EFF=INTRON(MODIFIER||||550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.1|16|1),INTRON(MODIFIER||||550|LOC_Os10g36530|protein_coding|CODING|LOC_Os10g36530.2|16|1) FN450-S.SNP.10:19558414 chr10:019558414 0 W/19558414-19558414 FN450-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN418-S.SNP.10:19559545 chr10:019559545 0 W/19559545-19559545 FN418-S Single Base Substitution A-G INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN2458.SNP.10:19560152 chr10:019560152 0 W/19560152-19560152 FN2458 SNP C -> T AC=1;AN=200;BQB=0.948282;DP=4356;DP4=1864,2165,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52726e-07;MQSB=0.97675;RPB=0.567602;SGB=45.0543;VDB=0.262875;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.10:19573278 chr10:019573278 0 W/19573278-19573278 FN1284-S Single Base Substitution A-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3710-S.SNP.10:19578756 chr10:019578756 0 W/19578756-19578756 FN3710-S SNP G -> A AC=2;AN=190;BQB=0.955865;DP=2670;DP4=1264,1319,8,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.78727e-11;MQSB=0.877601;RPB=0.564596;SGB=53.8699;VDB=0.956114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.10:19582727 chr10:019582727 0 W/19582727-19582727 FN1492-S Single Base Substitution T-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1389-S.SNP.10:19592260 chr10:019592260 0 W/19592260-19592260 FN1389-S Single Base Substitution C-G INTERGENIC Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN4051-S.SNP.10:19594495 chr10:019594495 0 W/19594495-19594495 FN4051-S SNP C -> T AC=2;AN=168;BQB=0.697995;DP=2850;DP4=1453,1254,20,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.32833e-16;MQSB=0.926073;RPB=0.753318;SGB=103.364;VDB=0.361161;EFF=UTR_3_PRIME(MODIFIER||118||127|LOC_Os10g36620|protein_coding|CODING|LOC_Os10g36620.1|1|1) FN3991-S.SNP.10:19601892 chr10:019601892 0 W/19601892-19601892 FN3991-S SNP C -> A AC=2;AN=168;BQB=0.9818;DP=2289;DP4=824,1355,12,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.61212e-12;MQSB=0.651235;RPB=0.870978;SGB=100.912;VDB=0.52706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.10:19605380 chr10:019605380 0 W/19605380-19605380 FN2130-S SNP G -> A AC=1;AN=168;BQB=0.00772121;DP=3859;DP4=2189,1621,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48807e-09;MQSB=0.237892;RPB=0.791977;SGB=-44.6276;VDB=0.116761;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.10:19612987 chr10:019612987 0 W/19612987-19612987 FN1400-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN4022-S.SNP.10:19621356 chr10:019621356 0 W/19621356-19621356 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.999976;DP=2581;DP4=1363,1034,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.85832e-08;MQSB=0.998076;RPB=0.920145;SGB=22.1847;VDB=0.474291;EFF=INTRON(MODIFIER||||634|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.4|1|1) FN-221.SNP.10:19621463 chr10:019621463 0 W/19621463-19621463 FN-221 Single Base Substitution T-C INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN3389-S.SNP.10:19623453 chr10:019623453 0 W/19623453-19623453 FN3389-S SNP C -> T AC=1;AN=184;BQB=0.827182;DP=3906;DP4=1681,2138,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2214e-07;MQSB=0.35697;RPB=0.843484;SGB=57.786;VDB=0.954305;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N186|634|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N186|634|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N186|634|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.4|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N186|560|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.5|2|1),SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N186|634|LOC_Os10g36690|protein_coding|CODING|LOC_Os10g36690.2|2|1) FN873-S.SNP.10:19626284 chr10:019626284 0 W/19626284-19626284 FN873-S Single Base Substitution G-A INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN1420-S.SNP.10:19628958 chr10:019628958 0 W/19628958-19628958 FN1420-S Single Base Substitution G-C INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3430-S.SNP.10:19631393 chr10:019631393 0 W/19631393-19631393 FN3430-S SNP C -> T AC=1;AN=184;BQB=0.997095;DP=3540;DP4=2159,1264,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.63896e-11;MQSB=0.985236;RPB=0.74758;SGB=80.3949;VDB=0.773639;EFF=UTR_3_PRIME(MODIFIER||233||125|LOC_Os10g36703|protein_coding|CODING|LOC_Os10g36703.1|1|1) FN1658-S.SNP.10:19650955 chr10:019650955 0 W/19650955-19650955 FN1658-S SNP T -> A AC=2;AN=188;BQB=0.00505799;DP=3600;DP4=1935,1618,19,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.39588e-06;MQSB=0.999761;RPB=0.62196;SGB=-75.0128;VDB=0.975381;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.10:19663763 chr10:019663763 0 W/19663763-19663763 FN2441 SNP G -> A AC=2;AN=200;BQB=0.96512;DP=4849;DP4=2171,2265,25,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000206228;MQB=1.69704e-28;MQSB=0.864864;RPB=0.851782;SGB=72.0916;VDB=0.291096;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.10:19664550 chr10:019664550 0 W/19664550-19664550 FN-350 Single Base Substitution G-T INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN1333-S.SNP.10:19667015 chr10:019667015 0 W/19667015-19667015 FN1333-S Single Base Substitution T-C INTRON HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1230-S.SNP.10:19679615 chr10:019679615 0 W/19679615-19679615 FN1230-S Single Base Substitution A-T INTRON HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2532-S.SNP.10:19685111 chr10:019685111 0 W/19685111-19685111 FN2532-S SNP A -> G AC=2;AN=198;BQB=0.974935;DP=3634;DP4=1568,1652,10,23;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.79611e-15;MQSB=0.644302;RPB=0.968414;SGB=-4.31386;VDB=0.803806;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.10:19691537 chr10:019691537 0 W/19691537-19691537 FN-152 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g36780 OsProCP4 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1625-S.SNP.10:19691925 chr10:019691925 0 W/19691925-19691925 FN1625-S Single Base Substitution A-C STOP_LOST Homo LOC_Os10g36780 OsProCP4 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.10:19691925 chr10:019691925 0 W/19691925-19691925 FN1626-S SNP A -> C AC=2;AN=188;BQB=0.908921;DP=2564;DP4=1307,1206,24,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62412e-15;MQSB=0.990851;RPB=0.644667;SGB=121.023;VDB=0.489002;EFF=STOP_LOST(HIGH|MISSENSE|tgA/tgC|*491C|490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.2|14|1),STOP_LOST(HIGH|MISSENSE|tgA/tgC|*491C|490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.3|14|1),STOP_LOST(HIGH|MISSENSE|tgA/tgC|*491C|490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.1|14|1),UTR_3_PRIME(MODIFIER||1575||404|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.4|13|1) FN2150-S.SNP.10:19692310 chr10:019692310 0 W/19692310-19692310 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.400139;DP=2939;DP4=1526,1367,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.69612e-08;MQSB=0.995277;RPB=0.988512;SGB=-39.5049;VDB=0.219549;EFF=UTR_3_PRIME(MODIFIER||385||490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.1|14|1),UTR_3_PRIME(MODIFIER||385||490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.3|15|1),INTRON(MODIFIER||||490|LOC_Os10g36780|protein_coding|CODING|LOC_Os10g36780.2|14|1) FN3905-S.SNP.10:19697185 chr10:019697185 0 W/19697185-19697185 FN3905-S SNP G -> T AC=1;AN=158;BQB=0.981168;DP=2435;DP4=1110,1230,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.37251e-06;MQSB=0.936737;RPB=0.778261;SGB=33.9591;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.10:19703698 chr10:019703698 0 W/19703698-19703698 FN3994-S SNP C -> T AC=1;AN=168;BQB=0.739245;DP=1799;DP4=979,674,6,2;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000555864;MQB=0.000483823;MQSB=0.0128096;RPB=0.999868;SGB=30.0193;VDB=0.287459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.10:19708478 chr10:019708478 0 W/19708478-19708478 FN2109-S SNP A -> C AC=1;AN=168;BQB=0.214783;DP=3691;DP4=1895,1755,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.65497e-10;MQSB=0.994095;RPB=0.999926;SGB=31.908;VDB=0.947192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaC|K621N|1706|LOC_Os10g36810|protein_coding|CODING|LOC_Os10g36810.1|6|1) FN3390-S.SNP.10:19717703 chr10:019717703 0 W/19717703-19717703 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.985755;DP=3085;DP4=1669,1310,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21367e-10;MQSB=0.943206;RPB=0.328148;SGB=75.8731;VDB=0.0428976;EFF=INTRON(MODIFIER||||636|LOC_Os10g36830|protein_coding|CODING|LOC_Os10g36830.1|7|1) FN3390-S.SNP.10:19717705 chr10:019717705 0 W/19717705-19717705 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.9915;DP=3068;DP4=1655,1310,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.93659e-12;MQSB=0.934633;RPB=0.253209;SGB=30.8405;VDB=0.0452321;EFF=SPLICE_SITE_REGION(LOW||||636|LOC_Os10g36830|protein_coding|CODING|LOC_Os10g36830.1|7|1),INTRON(MODIFIER||||636|LOC_Os10g36830|protein_coding|CODING|LOC_Os10g36830.1|7|1) FN2358.SNP.10:19722888 chr10:019722888 0 W/19722888-19722888 FN2358 SNP A -> G AC=1;AN=192;BQB=0.95509;DP=4584;DP4=2110,2181,5,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000200901;MQSB=0.99448;RPB=0.994418;SGB=10.9636;VDB=0.998131;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.10:19723648 chr10:019723648 0 W/19723648-19723648 FN869-S Single Base Substitution T-G INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN807-S.SNP.10:19724554 chr10:019724554 0 W/19724554-19724554 FN807-S Single Base Substitution T-G INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3693-S.SNP.10:19736140 chr10:019736140 0 W/19736140-19736140 FN3693-S SNP T -> C AC=1;AN=190;BQB=0.897182;DP=3308;DP4=1417,1771,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80893e-07;MQSB=0.94885;RPB=0.93133;SGB=44.5415;VDB=0.255089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.10:19750295 chr10:019750295 0 W/19750295-19750295 FN3440-S SNP C -> A AC=1;AN=184;BQB=0.703627;DP=3305;DP4=1723,1445,12,16;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000302572;MQB=1.3593e-17;MQSB=0.0354991;RPB=0.0124579;SGB=88.5747;VDB=0.0087618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.10:19750296 chr10:019750296 0 W/19750296-19750296 FN3440-S SNP C -> G AC=1;AN=184;BQB=0.804229;DP=3332;DP4=1730,1442,13,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.9104e-19;MQSB=0.0386214;RPB=0.0187058;SGB=29.6292;VDB=0.0168941;EFF=INTERGENIC(MODIFIER||||||||||1) FN832-S.SNP.10:19750807 chr10:019750807 0 W/19750807-19750807 FN832-S Single Base Substitution C-T INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN483-S.SNP.10:19751462 chr10:019751462 0 W/19751462-19751462 FN483-S Single Base Substitution A-C INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1759-S.SNP.10:19755796 chr10:019755796 0 W/19755796-19755796 FN1759-S SNP T -> C AC=2;AN=188;BQB=0.897135;DP=3384;DP4=1813,1531,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.10352e-13;MQSB=0.77329;RPB=0.787016;SGB=-7.93693;VDB=0.330984;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.10:19757207 chr10:019757207 0 W/19757207-19757207 FN1716-S SNP G -> C AC=2;AN=188;BQB=0.666806;DP=3694;DP4=1863,1775,30,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.43699e-22;MQSB=0.987556;RPB=0.486074;SGB=-101.234;VDB=0.369898;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T1059S|1059|LOC_Os10g36880|protein_coding|CODING|LOC_Os10g36880.1|24|1) FN1517-S.SNP.10:19758875 chr10:019758875 0 W/19758875-19758875 FN1517-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g36880 kinesin motor domain containing protein, putative, expressed SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3311-S.SNP.10:19769132 chr10:019769132 0 W/19769132-19769132 FN3311-S SNP C -> T AC=1;AN=184;BQB=0.938209;DP=2605;DP4=1267,1223,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17343e-09;MQSB=0.915562;RPB=0.849523;SGB=62.3078;VDB=0.554145;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.10:19772327 chr10:019772327 0 W/19772327-19772327 FN456-S Single Base Substitution A-G INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN2494.SNP.10:19774173 chr10:019774173 0 W/19774173-19774173 FN2494 SNP A -> G AC=1;AN=200;BQB=0.99923;DP=4233;DP4=1961,1892,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.23661e-08;MQSB=0.64486;RPB=0.944314;SGB=33.0593;VDB=0.448272;EFF=INTERGENIC(MODIFIER||||||||||1) FN4020-S.SNP.10:19776045 chr10:019776045 0 W/19776045-19776045 FN4020-S SNP T -> C AC=2;AN=168;BQB=0.96435;DP=2806;DP4=1403,1215,21,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.18151e-19;MQSB=0.828839;RPB=0.871999;SGB=42.8227;VDB=0.996319;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G106|195|LOC_Os10g36900|protein_coding|CODING|LOC_Os10g36900.1|2|1) FN1271-S.SNP.10:19776668 chr10:019776668 0 W/19776668-19776668 FN1271-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN4247-S.SNP.10:19777592 chr10:019777592 0 W/19777592-19777592 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.955285;DP=2627;DP4=1319,1240,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01769e-06;MQSB=0.992977;RPB=0.94141;SGB=47.8722;VDB=0.843405;EFF=INTERGENIC(MODIFIER||||||||||1) FN620-S.SNP.10:19781574 chr10:019781574 0 W/19781574-19781574 FN620-S Single Base Substitution C-T INTRON HOMO SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3832-S.SNP.10:19782516 chr10:019782516 0 W/19782516-19782516 FN3832-S SNP G -> A AC=2;AN=190;BQB=0.985553;DP=2838;DP4=1271,1416,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.13697e-17;MQSB=0.951627;RPB=0.353256;SGB=56.8601;VDB=0.849673;EFF=INTRON(MODIFIER||||311|LOC_Os10g36924|protein_coding|CODING|LOC_Os10g36924.1|1|1) FN2262-S.SNP.10:19783025 chr10:019783025 0 W/19783025-19783025 FN2262-S SNP T -> C AC=1;AN=190;BQB=0.467185;DP=4946;DP4=2316,1934,20,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.36514e-15;MQSB=0.892679;RPB=0.830441;SGB=-3.2522;VDB=0.0622633;EFF=INTRON(MODIFIER||||311|LOC_Os10g36924|protein_coding|CODING|LOC_Os10g36924.1|1|1) FN2441.SNP.10:19790729 chr10:019790729 0 W/19790729-19790729 FN2441 SNP G -> T AC=2;AN=200;BQB=0.997093;DP=3986;DP4=1527,1797,20,18;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000250878;MQB=3.03795e-20;MQSB=0.170666;RPB=0.642393;SGB=-384.408;VDB=0.140803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.10:19798470 chr10:019798470 0 W/19798470-19798470 FN2117-S SNP G -> A AC=1;AN=168;BQB=0.21162;DP=3458;DP4=1770,1652,7,16;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=3.13253e-05;MQSB=0.919058;RPB=0.849942;SGB=-68.0681;VDB=0.570858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.10:19804300 chr10:019804300 0 W/19804300-19804300 FN3768-S SNP T -> C AC=1;AN=190;BQB=0.981377;DP=3357;DP4=1877,1318,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.42587e-09;MQSB=0.839799;RPB=0.953097;SGB=31.3213;VDB=0.565387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.10:19806358 chr10:019806358 0 W/19806358-19806358 FN1754-S SNP T -> G AC=1;AN=188;BQB=0.885194;DP=3238;DP4=1924,1285,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.57361e-05;MQSB=0.676997;RPB=0.876922;SGB=15.903;VDB=0.361024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.10:19807880 chr10:019807880 0 W/19807880-19807880 FN2275-S SNP G -> T AC=1;AN=190;BQB=0.867311;DP=3466;DP4=1676,1409,32,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.15186e-21;MQSB=0.147365;RPB=0.698325;SGB=208.481;VDB=0.541511;EFF=INTRON(MODIFIER||||55|LOC_Os10g36966|protein_coding|CODING|LOC_Os10g36966.1|1|1) FN708-S.SNP.10:19816201 chr10:019816201 0 W/19816201-19816201 FN708-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g36990 transposon protein, putative, unclassified, expressed SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3858-S.SNP.10:19822752 chr10:019822752 0 W/19822752-19822752 FN3858-S SNP C -> A AC=1;AN=158;BQB=0.911323;DP=2400;DP4=996,1261,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.82006e-06;MQSB=0.885359;RPB=0.87981;SGB=51.4366;VDB=0.691791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.10:19828778 chr10:019828778 0 W/19828778-19828778 FN2634-S SNP G -> A AC=1;AN=200;BQB=0.475862;DP=4563;DP4=2214,2099,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000219154;MQB=6.16552e-16;MQSB=0.858272;RPB=0.948956;SGB=55.5366;VDB=0.54823;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.10:19830167 chr10:019830167 0 W/19830167-19830167 FN812-S Single Base Substitution C-T INTRON HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN_955-1.SNP.10:19830901 chr10:019830901 0 W/19830901-19830901 FN_955-1 Single Base Substitution T-C HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN_955-1.SNP.10:19830902 chr10:019830902 0 W/19830902-19830902 FN_955-1 Single Base Substitution G-A HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN1703-S.SNP.10:19840084 chr10:019840084 0 W/19840084-19840084 FN1703-S SNP T -> C AC=2;AN=188;BQB=0.370038;DP=2954;DP4=1402,1488,13,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.43682e-16;MQSB=0.995182;RPB=0.889169;SGB=-42.845;VDB=0.723641;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.10:19840723 chr10:019840723 0 W/19840723-19840723 FN-186 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-144.SNP.10:19850627 chr10:019850627 0 W/19850627-19850627 FN-144 Single Base Substitution T-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3781-S.SNP.10:19853853 chr10:019853853 0 W/19853853-19853853 FN3781-S SNP A -> C AC=1;AN=190;BQB=0.423589;DP=2775;DP4=1467,1200,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61555e-06;MQSB=0.966458;RPB=0.650103;SGB=23.6597;VDB=0.582305;EFF=UTR_3_PRIME(MODIFIER||1197||123|LOC_Os10g37090|protein_coding|CODING|LOC_Os10g37090.1|1|1) FN2492.SNP.10:19853939 chr10:019853939 0 W/19853939-19853939 FN2492 SNP C -> T AC=2;AN=200;BQB=0.104447;DP=4596;DP4=2246,2086,18,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.73077e-23;MQSB=0.879211;RPB=0.689326;SGB=48.014;VDB=0.378287;EFF=UTR_3_PRIME(MODIFIER||1111||123|LOC_Os10g37090|protein_coding|CODING|LOC_Os10g37090.1|1|1) FN-348.SNP.10:19854018 chr10:019854018 0 W/19854018-19854018 FN-348 Single Base Substitution C-T UTR_3_PRIME HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1058-S.SNP.10:19854108 chr10:019854108 0 W/19854108-19854108 FN1058-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. W475-4-2.SNP.10:19856616 chr10:019856616 0 W/19856616-19856616 W475-4-2 Single Base Substitution T-C INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN3385-S.SNP.10:19870819 chr10:019870819 0 W/19870819-19870819 FN3385-S SNP G -> T AC=1;AN=184;BQB=0.393326;DP=3133;DP4=1452,1498,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.75054e-06;MQSB=0.907592;RPB=0.478477;SGB=18.2315;VDB=0.243224;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.10:19873500 chr10:019873500 0 W/19873500-19873500 FN1758-S SNP C -> T AC=2;AN=188;BQB=0.911083;DP=2778;DP4=1110,1609,10,23;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.06479e-15;MQSB=1.26457e-05;RPB=0.999965;SGB=69.3122;VDB=0.658166;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.10:19874563 chr10:019874563 0 W/19874563-19874563 FN484-S Single Base Substitution C-T INTERGENIC HET SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2097-S.SNP.10:19875446 chr10:019875446 0 W/19875446-19875446 FN2097-S SNP T -> G AC=2;AN=168;BQB=0.477271;DP=2239;DP4=610,1498,7,30;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.02676e-17;MQSB=0.995993;RPB=0.700374;SGB=75.6627;VDB=0.221445;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.10:19878286 chr10:019878286 0 W/19878286-19878286 FN1528-S Single Base Substitution A-T INTERGENIC HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN933-S.SNP.10:19885022 chr10:019885022 0 W/19885022-19885022 FN933-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN933-S.SNP.10:19885023 chr10:019885023 0 W/19885023-19885023 FN933-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN933-S.SNP.10:19885024 chr10:019885024 0 W/19885024-19885024 FN933-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN-178.SNP.10:19885903 chr10:019885903 0 W/19885903-19885903 FN-178 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN850-S.SNP.10:19886882 chr10:019886882 0 W/19886882-19886882 FN850-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g37170 retrotransposon protein, putative, unclassified, expressed SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN2597-S.SNP.10:19891791 chr10:019891791 0 W/19891791-19891791 FN2597-S SNP A -> G AC=2;AN=198;BQB=0.989417;DP=4078;DP4=1936,1904,12,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.57711e-17;MQSB=0.911889;RPB=0.199148;SGB=146.046;VDB=0.111987;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.10:19896232 chr10:019896232 0 W/19896232-19896232 FN1176-S Single Base Substitution A-C INTRON HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2532-S.SNP.10:19906079 chr10:019906079 0 W/19906079-19906079 FN2532-S SNP G -> A AC=2;AN=198;BQB=0.938269;DP=4091;DP4=2162,1671,19,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000244439;MQB=3.47269e-21;MQSB=0.826724;RPB=0.789847;SGB=1.63734;VDB=0.591155;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.10:19926065 chr10:019926065 0 W/19926065-19926065 FN-410 Single Base Substitution A-T INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.10:19926065 chr10:019926065 0 W/19926065-19926065 FN410-S Single Base Substitution A-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN767-S.SNP.10:19934494 chr10:019934494 0 W/19934494-19934494 FN767-S Single Base Substitution G-A INTRON HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2634-S.SNP.10:19964307 chr10:019964307 0 W/19964307-19964307 FN2634-S SNP T -> C AC=1;AN=200;BQB=0.387719;DP=4418;DP4=2185,1878,18,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71202e-14;MQSB=0.997919;RPB=0.878072;SGB=28.752;VDB=0.378091;EFF=INTRON(MODIFIER||||757|LOC_Os10g37280|protein_coding|CODING|LOC_Os10g37280.1|1|1) FN2241-S.SNP.10:19972756 chr10:019972756 0 W/19972756-19972756 FN2241-S SNP T -> A AC=1;AN=190;BQB=0.991658;DP=5150;DP4=2191,2559,9,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.76495e-11;MQSB=0.712733;RPB=0.352878;SGB=36.4291;VDB=0.905401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.10:19977425 chr10:019977425 0 W/19977425-19977425 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.000325507;DP=4217;DP4=1696,2390,13,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.3234e-08;MQSB=0.995732;RPB=0.297016;SGB=-502.046;VDB=0.888035;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.10:19978566 chr10:019978566 0 W/19978566-19978566 FN-199 Single Base Substitution T-G INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3571-S.SNP.10:19980365 chr10:019980365 0 W/19980365-19980365 FN3571-S SNP T -> A AC=2;AN=188;BQB=0.862562;DP=2932;DP4=1561,1169,8,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.2416e-13;MQSB=0.815133;RPB=0.95867;SGB=94.4119;VDB=0.95305;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.10:19981510 chr10:019981510 0 W/19981510-19981510 FN551-S Single Base Substitution C-G INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN4039-S.SNP.10:19985757 chr10:019985757 0 W/19985757-19985757 FN4039-S SNP G -> A AC=1;AN=168;BQB=0.872834;DP=2323;DP4=1024,1224,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.14479e-08;MQSB=0.999936;RPB=0.669841;SGB=61.0344;VDB=0.796389;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.10:19987204 chr10:019987204 0 W/19987204-19987204 FN3569-S SNP G -> T AC=1;AN=188;BQB=0.324737;DP=2590;DP4=1235,1290,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.11402e-11;MQSB=0.983953;RPB=0.985585;SGB=85.5904;VDB=0.773852;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.10:19989350 chr10:019989350 0 W/19989350-19989350 FN1150-S Single Base Substitution A-T INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2204-S.SNP.10:19989949 chr10:019989949 0 W/19989949-19989949 FN2204-S SNP A -> T AC=1;AN=190;BQB=0.848461;DP=5201;DP4=2349,2421,23,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.00954e-20;MQSB=0.312268;RPB=0.210581;SGB=41.4042;VDB=0.829538;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.10:19991571 chr10:019991571 0 W/19991571-19991571 FN4073-S SNP G -> A AC=1;AN=182;BQB=0.779781;DP=3268;DP4=1494,1706,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.75378e-06;MQSB=0.267948;RPB=0.632401;SGB=28.6061;VDB=0.0748923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.10:19993973 chr10:019993973 0 W/19993973-19993973 FN1504-S Single Base Substitution T-C INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN-140.SNP.10:19994220 chr10:019994220 0 W/19994220-19994220 FN-140 Single Base Substitution A-G INTERGENIC HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN3681-S.SNP.10:19999887 chr10:019999887 0 W/19999887-19999887 FN3681-S SNP T -> A AC=1;AN=190;BQB=0.537145;DP=2844;DP4=1277,1470,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.42739e-06;MQSB=0.999334;RPB=0.766919;SGB=39.6545;VDB=0.134895;EFF=INTRON(MODIFIER||||375|LOC_Os10g37330|protein_coding|CODING|LOC_Os10g37330.1|4|1) FN1026-S.SNP.10:20000424 chr10:020000424 0 W/20000424-20000424 FN1026-S Single Base Substitution C-T INTRON HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. W23-2-1.SNP.10:20002440 chr10:020002440 0 W/20002440-20002440 W23-2-1 Single Base Substitution T-A INTRON HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN2134-S.SNP.10:20005793 chr10:020005793 0 W/20005793-20005793 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.930251;DP=3833;DP4=1790,1994,15,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.42078e-15;MQSB=0.989017;RPB=0.344459;SGB=-9.7719;VDB=0.281741;EFF=INTERGENIC(MODIFIER||||||||||1) FN1025-S.SNP.10:20008930 chr10:020008930 0 W/20008930-20008930 FN1025-S Single Base Substitution G-C INTERGENIC HOMO SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN4187-S.SNP.10:20010105 chr10:020010105 0 W/20010105-20010105 FN4187-S SNP A -> G AC=1;AN=170;BQB=0.888456;DP=2406;DP4=1176,1147,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.13267e-09;MQSB=0.439602;RPB=0.390697;SGB=41.7633;VDB=0.930993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.10:20016392 chr10:020016392 0 W/20016392-20016392 FN1222-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN3834-S.SNP.10:20017472 chr10:020017472 0 W/20017472-20017472 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.957112;DP=2408;DP4=937,1307,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.80484e-09;MQSB=0.907833;RPB=0.329546;SGB=23.6597;VDB=0.0699638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3481-S.SNP.10:20022067 chr10:020022067 0 W/20022067-20022067 FN3481-S SNP C -> G AC=1;AN=184;BQB=0.579823;DP=2429;DP4=1338,1016,10,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.1043e-06;MQSB=0.0506178;RPB=0.556407;SGB=48.7425;VDB=0.840969;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.10:20026253 chr10:020026253 0 W/20026253-20026253 FN887-S Single Base Substitution A-G INTRON HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2662-S.SNP.10:20026577 chr10:020026577 0 W/20026577-20026577 FN2662-S SNP C -> G AC=1;AN=200;BQB=0.882158;DP=5253;DP4=2390,2577,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25058e-16;MQSB=0.984707;RPB=0.972273;SGB=123.342;VDB=0.451211;EFF=INTRON(MODIFIER||||586|LOC_Os10g37410|protein_coding|CODING|LOC_Os10g37410.1|4|1) FN1302-S.SNP.10:20037271 chr10:020037271 0 W/20037271-20037271 FN1302-S Single Base Substitution A-G INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2197-S.SNP.10:20038810 chr10:020038810 0 W/20038810-20038810 FN2197-S SNP G -> C AC=1;AN=190;BQB=0.36001;DP=4945;DP4=2301,2272,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.52651e-09;MQSB=0.844811;RPB=0.990421;SGB=26.2136;VDB=0.440585;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.10:20038926 chr10:020038926 0 W/20038926-20038926 FN3541-S SNP G -> A AC=1;AN=188;BQB=0.899649;DP=2770;DP4=1419,1304,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.92533e-06;MQSB=0.989644;RPB=0.99038;SGB=21.8113;VDB=0.319249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.10:20039012 chr10:020039012 0 W/20039012-20039012 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.695153;DP=5057;DP4=2450,2333,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.83793e-10;MQSB=0.999606;RPB=0.997181;SGB=8.77274;VDB=0.101616;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.10:20040719 chr10:020040719 0 W/20040719-20040719 FN3355-S SNP G -> C AC=1;AN=184;BQB=0.605637;DP=2689;DP4=1276,1318,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82833e-05;MQSB=0.98444;RPB=0.780763;SGB=25.1826;VDB=0.258129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.10:20045642 chr10:020045642 0 W/20045642-20045642 FN2204-S SNP G -> T AC=1;AN=190;BQB=0.991002;DP=3488;DP4=1579,1659,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.41039e-08;MQSB=0.450095;RPB=0.231489;SGB=80.9724;VDB=0.939134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R163S|399|LOC_Os10g37450|protein_coding|CODING|LOC_Os10g37450.1|2|1) FN581-S.SNP.10:20049800 chr10:020049800 0 W/20049800-20049800 FN581-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2175-S.SNP.10:20051521 chr10:020051521 0 W/20051521-20051521 FN2175-S SNP A -> G AC=1;AN=168;BQB=0.0262291;DP=3256;DP4=1587,1636,8,13;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.135442;MQB=0.858857;MQSB=4.71743e-16;RPB=0.634604;SGB=-39.5049;VDB=0.278446;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S1310P|1457|LOC_Os10g37468|protein_coding|CODING|LOC_Os10g37468.1|1|1) FN3495-S.SNP.10:20053257 chr10:020053257 0 W/20053257-20053257 FN3495-S SNP C -> T AC=2;AN=188;BQB=0.564167;DP=2666;DP4=1212,1384,11,17;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.00412603;MQB=0.022798;MQSB=0.878771;RPB=0.230342;SGB=121.672;VDB=0.123754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G731E|1457|LOC_Os10g37468|protein_coding|CODING|LOC_Os10g37468.1|1|1) FN1220-S.SNP.10:20065402 chr10:020065402 0 W/20065402-20065402 FN1220-S Single Base Substitution C-A INTRON HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1220-S.SNP.10:20065403 chr10:020065403 0 W/20065403-20065403 FN1220-S Single Base Substitution T-C INTRON HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-368.SNP.10:20067880 chr10:020067880 0 W/20067880-20067880 FN-368 Single Base Substitution A-T INTRON HOMO SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN1012-S.SNP.10:20070624 chr10:020070624 0 W/20070624-20070624 FN1012-S Single Base Substitution A-C INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3858-S.SNP.10:20073128 chr10:020073128 0 W/20073128-20073128 FN3858-S SNP C -> T AC=1;AN=158;BQB=0.995985;DP=2398;DP4=1220,1103,12,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.80102e-10;MQSB=0.934219;RPB=0.998135;SGB=44.1818;VDB=0.942534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R171H|387|LOC_Os10g37490|protein_coding|CODING|LOC_Os10g37490.1|4|1) FN-402.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN-402 Single Base Substitution A-T INTERGENIC HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN1646-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN1646-S Single Base Substitution A-T INTERGENIC Homo SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1761-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN1761-S SNP A -> T AC=2;AN=188;BQB=0.0237251;DP=2075;DP4=797,692,18,7;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=0.000944557;MQSB=1.70895e-06;RPB=0.529127;SGB=-109.509;VDB=0.0330328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN2296 SNP A -> T AC=2;AN=192;BQB=0.487445;DP=4115;DP4=1643,1588,22,18;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0;MQB=1.82383e-18;MQSB=0.864107;RPB=0.805086;SGB=43.3348;VDB=0.20809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN2547-S SNP A -> T AC=2;AN=198;BQB=0.99039;DP=3592;DP4=1492,1395,12,6;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.000278396;MQB=2.87656e-07;MQSB=0.965192;RPB=0.326396;SGB=-103.601;VDB=0.431797;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN3378-S SNP A -> T AC=2;AN=184;BQB=0.990566;DP=2696;DP4=1135,996,19,8;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0;MQB=6.67893e-15;MQSB=0.715377;RPB=0.990331;SGB=53.5365;VDB=0.183238;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN3832-S SNP A -> T AC=2;AN=190;BQB=0.944808;DP=2227;DP4=935,799,15,12;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=2.43813e-13;MQSB=0.947488;RPB=0.986826;SGB=25.1583;VDB=0.883741;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN402-S Single Base Substitution A-T INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN4138-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN4138-S SNP A -> T AC=2;AN=170;BQB=0.40703;DP=2164;DP4=903,824,14,5;HOB=0.0232526;ICB=0.494188;MQ=45;MQ0F=0;MQB=1.95295e-07;MQSB=0.371056;RPB=0.647162;SGB=8.66042;VDB=0.631751;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN510-S Single Base Substitution A-T INTERGENIC HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN585-S.SNP.10:20074557 chr10:020074557 0 W/20074557-20074557 FN585-S Single Base Substitution A-T INTERGENIC HET SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN-390.SNP.10:20093212 chr10:020093212 0 W/20093212-20093212 FN-390 Single Base Substitution A-C INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN1476-S.SNP.10:20094120 chr10:020094120 0 W/20094120-20094120 FN1476-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g37520 major facilitator superfamily domain-containing protein 5, putative, expressed SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN1606-S.SNP.10:20098944 chr10:020098944 0 W/20098944-20098944 FN1606-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g37540 OsFBDUF48 - F-box and DUF domain containing protein, expressed SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3712-S.SNP.10:20102178 chr10:020102178 0 W/20102178-20102178 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.893654;DP=2698;DP4=1213,1349,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00111193;MQB=4.70348e-07;MQSB=0.0957491;RPB=0.427394;SGB=49.0954;VDB=0.232807;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.10:20102496 chr10:020102496 0 W/20102496-20102496 FN1227-S Single Base Substitution G-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN775-S.SNP.10:20103763 chr10:020103763 0 W/20103763-20103763 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2171-S.SNP.10:20104975 chr10:020104975 0 W/20104975-20104975 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.0414557;DP=3203;DP4=1518,1625,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=23;MQ0F=0.261318;MQB=0.987908;MQSB=9.41966e-20;RPB=0.0885199;SGB=-113.477;VDB=0.00916284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R475Q|513|LOC_Os10g37560|protein_coding|CODING|LOC_Os10g37560.1|6|1) FN2171-S.SNP.10:20104976 chr10:020104976 0 W/20104976-20104976 FN2171-S SNP G -> T AC=1;AN=168;BQB=0.825769;DP=3203;DP4=1530,1618,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.253825;MQB=0.981411;MQSB=9.17899e-17;RPB=0.0820149;SGB=69.0561;VDB=0.000541237;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R475|513|LOC_Os10g37560|protein_coding|CODING|LOC_Os10g37560.1|6|1) FN3698-S.SNP.10:20106826 chr10:020106826 0 W/20106826-20106826 FN3698-S SNP C -> T AC=1;AN=190;BQB=0.993859;DP=3488;DP4=1504,1852,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.100057;MQB=0.995557;MQSB=0;RPB=0.884729;SGB=31.3213;VDB=0.394181;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E42K|513|LOC_Os10g37560|protein_coding|CODING|LOC_Os10g37560.1|1|1) FN1230-S.SNP.10:20108340 chr10:020108340 0 W/20108340-20108340 FN1230-S Single Base Substitution G-C INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN3521-S.SNP.10:20114395 chr10:020114395 0 W/20114395-20114395 FN3521-S SNP G -> C AC=1;AN=188;BQB=0.937331;DP=4094;DP4=1572,2431,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.7305e-08;MQSB=0.793396;RPB=0.87279;SGB=71.6954;VDB=0.233523;EFF=INTERGENIC(MODIFIER||||||||||1) FN3718-S.SNP.10:20117044 chr10:020117044 0 W/20117044-20117044 FN3718-S SNP A -> C AC=2;AN=190;BQB=0.880518;DP=2832;DP4=1395,1345,16,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.85677e-12;MQSB=0.913605;RPB=0.761053;SGB=99.1879;VDB=0.979918;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.10:20120036 chr10:020120036 0 W/20120036-20120036 FN456-S Single Base Substitution T-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1725-S.SNP.10:20127937 chr10:020127937 0 W/20127937-20127937 FN1725-S SNP C -> A AC=1;AN=188;BQB=0.0629717;DP=3464;DP4=1909,1510,16,10;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000288684;MQB=0.00263296;MQSB=5.11473e-10;RPB=0.158926;SGB=-40.1048;VDB=0.497837;EFF=INTRON(MODIFIER||||768|LOC_Os10g37610|protein_coding|CODING|LOC_Os10g37610.1|1|1) FN3452-S.SNP.10:20128457 chr10:020128457 0 W/20128457-20128457 FN3452-S SNP G -> A AC=2;AN=184;BQB=0.979601;DP=2527;DP4=1360,1098,12,8;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.0767709;MQB=0.956584;MQSB=0.00684514;RPB=0.0156799;SGB=84.9167;VDB=0.178542;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G538|768|LOC_Os10g37610|protein_coding|CODING|LOC_Os10g37610.1|2|1) FN887-S.SNP.10:20129394 chr10:020129394 0 W/20129394-20129394 FN887-S Single Base Substitution G-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN437-S.SNP.10:20131172 chr10:020131172 0 W/20131172-20131172 FN437-S Single Base Substitution C-T INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN2538-S.SNP.10:20143844 chr10:020143844 0 W/20143844-20143844 FN2538-S SNP A -> G AC=1;AN=198;BQB=0.76811;DP=4115;DP4=2155,1734,12,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243013;MQB=1.78496e-14;MQSB=0.999993;RPB=0.905977;SGB=72.5051;VDB=0.666428;EFF=INTRON(MODIFIER||||420|LOC_Os10g37640|protein_coding|CODING|LOC_Os10g37640.1|2|1),INTRON(MODIFIER||||348|LOC_Os10g37640|protein_coding|CODING|LOC_Os10g37640.2|1|1) FN2240-S.SNP.10:20151391 chr10:020151391 0 W/20151391-20151391 FN2240-S SNP T -> C AC=1;AN=190;BQB=0.945597;DP=4879;DP4=2413,2097,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.3013e-09;MQSB=0.829279;RPB=0.850762;SGB=-12.6681;VDB=0.650176;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.10:20152754 chr10:020152754 0 W/20152754-20152754 FN431-S Single Base Substitution G-A INTERGENIC HET SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN3395-S.SNP.10:20163385 chr10:020163385 0 W/20163385-20163385 FN3395-S SNP C -> T AC=1;AN=184;BQB=0.99864;DP=3462;DP4=1401,1948,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50974e-09;MQSB=0.588306;RPB=0.916169;SGB=28.3187;VDB=0.245357;EFF=INTERGENIC(MODIFIER||||||||||1) FN_1017-1.SNP.10:20163594 chr10:020163594 0 W/20163594-20163594 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2468.SNP.10:20170324 chr10:020170324 0 W/20170324-20170324 FN2468 SNP T -> C AC=2;AN=200;BQB=0.760988;DP=5231;DP4=2261,2651,11,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.8004e-17;MQSB=0.465235;RPB=0.802783;SGB=90.7419;VDB=0.222376;EFF=INTRON(MODIFIER||||413|LOC_Os10g37690|protein_coding|CODING|LOC_Os10g37690.1|8|1) FN2452.SNP.10:20175409 chr10:020175409 0 W/20175409-20175409 FN2452 SNP G -> A AC=1;AN=200;BQB=0.49724;DP=3344;DP4=1451,1684,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03139e-08;MQSB=0.854043;RPB=0.633396;SGB=32.0901;VDB=0.474315;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.10:20186690 chr10:020186690 0 W/20186690-20186690 FN3923-S SNP C -> A AC=1;AN=158;BQB=0.898844;DP=2604;DP4=1232,1267,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.85253e-05;MQSB=0.999073;RPB=0.396161;SGB=33.9591;VDB=0.186673;EFF=INTRON(MODIFIER||||520|LOC_Os10g37730|protein_coding|CODING|LOC_Os10g37730.1|9|1),INTRON(MODIFIER||||334|LOC_Os10g37730|protein_coding|CODING|LOC_Os10g37730.2|9|1),INTRON(MODIFIER||||329|LOC_Os10g37730|protein_coding|CODING|LOC_Os10g37730.3|8|1) FN3287-S.SNP.10:20198640 chr10:020198640 0 W/20198640-20198640 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.916875;DP=2692;DP4=1340,1259,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31905e-12;MQSB=0.892974;RPB=0.987862;SGB=35.884;VDB=0.159721;EFF=INTRON(MODIFIER||||469|LOC_Os10g37740|protein_coding|CODING|LOC_Os10g37740.1|6|1) FN1277-S.SNP.10:20215310 chr10:020215310 0 W/20215310-20215310 FN1277-S Single Base Substitution G-A INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN837-S.SNP.10:20223846 chr10:020223846 0 W/20223846-20223846 FN837-S Single Base Substitution G-T INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2767-S.SNP.10:20227728 chr10:020227728 0 W/20227728-20227728 FN2767-S SNP A -> C AC=1;AN=198;BQB=0.554937;DP=3795;DP4=1797,1827,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.7691e-08;MQSB=0.972057;RPB=0.645356;SGB=36.5539;VDB=0.790469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S909R|1151|LOC_Os10g37800|protein_coding|CODING|LOC_Os10g37800.1|5|1) FN3783-S.SNP.10:20230698 chr10:020230698 0 W/20230698-20230698 FN3783-S SNP G -> A AC=2;AN=190;BQB=0.977831;DP=2922;DP4=1333,1455,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.05492e-10;MQSB=0.902718;RPB=0.188721;SGB=80.9724;VDB=0.0282391;EFF=INTRON(MODIFIER||||1151|LOC_Os10g37800|protein_coding|CODING|LOC_Os10g37800.1|1|1) FN2500.SNP.10:20244847 chr10:020244847 0 W/20244847-20244847 FN2500 SNP C -> T AC=1;AN=200;BQB=0.993001;DP=4769;DP4=2160,2326,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06671e-16;MQSB=0.88945;RPB=0.848259;SGB=55.5366;VDB=0.303348;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q869*|926|LOC_Os10g37820|protein_coding|CODING|LOC_Os10g37820.1|9|1);LOF=(LOC_Os10g37820|LOC_Os10g37820|1|1.00);NMD=(LOC_Os10g37820|LOC_Os10g37820|1|1.00) FN4147-S.SNP.10:20250464 chr10:020250464 0 W/20250464-20250464 FN4147-S SNP C -> A AC=1;AN=170;BQB=0.791082;DP=2592;DP4=1234,1266,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.16366e-06;MQSB=0.951975;RPB=0.442769;SGB=31.4354;VDB=0.532754;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.10:20258249 chr10:020258249 0 W/20258249-20258249 FN4190-S SNP G -> T AC=1;AN=170;BQB=0.996399;DP=2339;DP4=1191,1096,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.99653e-08;MQSB=0.998572;RPB=0.570433;SGB=56.7575;VDB=0.902698;EFF=UTR_3_PRIME(MODIFIER||539||133|LOC_Os10g37840|protein_coding|CODING|LOC_Os10g37840.5|4|1),INTRON(MODIFIER||||176|LOC_Os10g37840|protein_coding|CODING|LOC_Os10g37840.4|4|1),INTRON(MODIFIER||||291|LOC_Os10g37840|protein_coding|CODING|LOC_Os10g37840.2|4|1),INTRON(MODIFIER||||240|LOC_Os10g37840|protein_coding|CODING|LOC_Os10g37840.3|4|1),INTRON(MODIFIER||||291|LOC_Os10g37840|protein_coding|CODING|LOC_Os10g37840.7|4|1) FN739-S.SNP.10:20259063 chr10:020259063 0 W/20259063-20259063 FN739-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3997-S.SNP.10:20268392 chr10:020268392 0 W/20268392-20268392 FN3997-S SNP A -> G AC=2;AN=168;BQB=0.903093;DP=2596;DP4=1184,1257,15,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.11697e-14;MQSB=0.91011;RPB=0.811393;SGB=86.2102;VDB=0.598594;EFF=INTERGENIC(MODIFIER||||||||||1) FN2351.SNP.10:20285609 chr10:020285609 0 W/20285609-20285609 FN2351 SNP C -> T AC=1;AN=192;BQB=0.959794;DP=4750;DP4=2038,2327,11,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58319e-15;MQSB=0.453648;RPB=0.264811;SGB=-40.5556;VDB=0.889973;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.10:20285965 chr10:020285965 0 W/20285965-20285965 FN903-S Single Base Substitution T-C INTERGENIC HOMO SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN2463.SNP.10:20286772 chr10:020286772 0 W/20286772-20286772 FN2463 SNP C -> A AC=1;AN=200;BQB=0.463455;DP=2943;DP4=1473,1227,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000339789;MQB=0.000237125;MQSB=0.988563;RPB=0.696997;SGB=11.2488;VDB=0.687582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.10:20288839 chr10:020288839 0 W/20288839-20288839 FN2380 SNP G -> A AC=1;AN=192;BQB=0.968426;DP=5123;DP4=2581,2313,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.92799e-12;MQSB=0.98156;RPB=0.997124;SGB=71.8591;VDB=0.970732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.10:20289484 chr10:020289484 0 W/20289484-20289484 FN2408 SNP A -> T AC=1;AN=200;BQB=0.416721;DP=5093;DP4=2287,2481,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15311e-07;MQSB=0.999934;RPB=0.728559;SGB=7.88476;VDB=0.177244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1290-S.SNP.10:20300101 chr10:020300101 0 W/20300101-20300101 FN1290-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1554-37-38.SNP.10:20303093 chr10:020303093 0 W/20303093-20303093 FN1554-37-38 SNP C -> A AC=1;AN=190;BQB=0.996785;DP=5239;DP4=2484,2438,19,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05017e-15;MQSB=0.91155;RPB=0.98926;SGB=-10.4526;VDB=0.205905;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.10:20303969 chr10:020303969 0 W/20303969-20303969 FN-237 Single Base Substitution G-A INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN887-S.SNP.10:20306528 chr10:020306528 0 W/20306528-20306528 FN887-S Single Base Substitution T-A INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN512-S.SNP.10:20308300 chr10:020308300 0 W/20308300-20308300 FN512-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN512-S.SNP.10:20308301 chr10:020308301 0 W/20308301-20308301 FN512-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os10g37920 MATE efflux family protein, putative, expressed SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3815-S.SNP.10:20309959 chr10:020309959 0 W/20309959-20309959 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.962252;DP=2358;DP4=1039,1232,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37546e-05;MQSB=0.992126;RPB=0.831733;SGB=10.8904;VDB=0.356498;EFF=INTERGENIC(MODIFIER||||||||||1) FN1205-S.SNP.10:20313794 chr10:020313794 0 W/20313794-20313794 FN1205-S Single Base Substitution A-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3828-S.SNP.10:20322886 chr10:020322886 0 W/20322886-20322886 FN3828-S SNP G -> T AC=2;AN=190;BQB=0.999985;DP=2893;DP4=1323,1477,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.60637e-12;MQSB=0.996944;RPB=0.911443;SGB=36.4291;VDB=0.364915;EFF=INTRON(MODIFIER||||1585|LOC_Os10g37940|protein_coding|CODING|LOC_Os10g37940.1|6|1) FN2279-S.SNP.10:20329618 chr10:020329618 0 W/20329618-20329618 FN2279-S SNP T -> C AC=1;AN=190;BQB=0.958932;DP=5231;DP4=2802,1975,18,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000191168;MQB=2.26932e-18;MQSB=0.999947;RPB=0.714759;SGB=61.9679;VDB=0.170361;EFF=INTERGENIC(MODIFIER||||||||||1) FN748-S.SNP.10:20333230 chr10:020333230 0 W/20333230-20333230 FN748-S Single Base Substitution C-A INTERGENIC HET SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3504-S.SNP.10:20333481 chr10:020333481 0 W/20333481-20333481 FN3504-S SNP C -> T AC=1;AN=188;BQB=0.984921;DP=2752;DP4=1438,1217,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.98518e-08;MQSB=0.855903;RPB=0.365011;SGB=62.6088;VDB=0.0149618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.10:20340670 chr10:020340670 0 W/20340670-20340670 FN1251-S Single Base Substitution G-A SPLICE_SITE_REGION HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN322-S.SNP.10:20341916 chr10:020341916 0 W/20341916-20341916 FN322-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g37970 expressed protein SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN-132.SNP.10:20347630 chr10:020347630 0 W/20347630-20347630 FN-132 Single Base Substitution G-C INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2532-S.SNP.10:20353515 chr10:020353515 0 W/20353515-20353515 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.830096;DP=4164;DP4=2082,1877,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.68959e-13;MQSB=0.737577;RPB=0.868356;SGB=44.9151;VDB=0.16991;EFF=INTRON(MODIFIER||||74|LOC_Os10g37990|protein_coding|CODING|LOC_Os10g37990.1|1|1) FN3752-S.SNP.10:20356537 chr10:020356537 0 W/20356537-20356537 FN3752-S SNP T -> A AC=1;AN=190;BQB=0.982793;DP=2793;DP4=1259,1466,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000351998;MQSB=0.771918;RPB=0.584797;SGB=21.8853;VDB=0.680401;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.10:20356637 chr10:020356637 0 W/20356637-20356637 FN-169 Single Base Substitution T-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1333-S.SNP.10:20360260 chr10:020360260 0 W/20360260-20360260 FN1333-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1711-S.SNP.10:20369834 chr10:020369834 0 W/20369834-20369834 FN1711-S SNP T -> G AC=2;AN=188;BQB=0.329169;DP=3575;DP4=1717,1805,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.55273e-16;MQSB=0.931574;RPB=0.938843;SGB=-133.118;VDB=0.0280082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1133-S.SNP.10:20373102 chr10:020373102 0 W/20373102-20373102 FN1133-S Single Base Substitution C-A INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2463.SNP.10:20379573 chr10:020379573 0 W/20379573-20379573 FN2463 SNP G -> A AC=1;AN=200;BQB=0.947844;DP=4680;DP4=2282,2171,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.63987e-15;MQSB=0.778623;RPB=0.857405;SGB=76.3213;VDB=0.244388;EFF=UTR_3_PRIME(MODIFIER||253||586|LOC_Os10g38050|protein_coding|CODING|LOC_Os10g38050.1|4|1),UTR_3_PRIME(MODIFIER||377||1046|LOC_Os10g38060|protein_coding|CODING|LOC_Os10g38060.2|10|1),INTRON(MODIFIER||||1046|LOC_Os10g38060|protein_coding|CODING|LOC_Os10g38060.1|10|1) FN1324-S.SNP.10:20382221 chr10:020382221 0 W/20382221-20382221 FN1324-S Single Base Substitution T-G INTRON HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN-243.SNP.10:20402876 chr10:020402876 0 W/20402876-20402876 FN-243 Single Base Substitution A-G INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN3514-S.SNP.10:20407015 chr10:020407015 0 W/20407015-20407015 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.926141;DP=3249;DP4=1483,1681,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.09895e-07;MQSB=0.00581427;RPB=0.964863;SGB=48.979;VDB=0.567407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.10:20408963 chr10:020408963 0 W/20408963-20408963 FN3868-S SNP T -> C AC=2;AN=158;BQB=0.981515;DP=2382;DP4=983,1250,3,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.4422e-09;MQSB=0.96009;RPB=0.994232;SGB=40.8124;VDB=0.395459;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.10:20410102 chr10:020410102 0 W/20410102-20410102 FN-329 Single Base Substitution G-A INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3789-S.SNP.10:20410102 chr10:020410102 0 W/20410102-20410102 FN3789-S SNP G -> A AC=2;AN=190;BQB=0.937706;DP=2857;DP4=1009,1702,15,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.27944e-16;MQSB=0.0280061;RPB=0.926072;SGB=107.178;VDB=0.159442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.10:20429779 chr10:020429779 0 W/20429779-20429779 FN2470 SNP G -> T AC=1;AN=200;BQB=0.999939;DP=4774;DP4=2135,2292,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.5194e-11;MQSB=0.994478;RPB=0.501305;SGB=32.0901;VDB=0.0781895;EFF=INTRON(MODIFIER||||532|LOC_Os10g38120|protein_coding|CODING|LOC_Os10g38120.1|1|1) FN4139-S.SNP.10:20431877 chr10:020431877 0 W/20431877-20431877 FN4139-S SNP A -> C AC=1;AN=170;BQB=0.849333;DP=2433;DP4=1225,1076,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.95524e-07;MQSB=0.934879;RPB=0.804431;SGB=38.3207;VDB=0.995836;EFF=UTR_3_PRIME(MODIFIER||408||244|LOC_Os10g38140|protein_coding|CODING|LOC_Os10g38140.1|2|1) FN3515-S.SNP.10:20435381 chr10:020435381 0 W/20435381-20435381 FN3515-S SNP A -> T AC=1;AN=188;BQB=0.556739;DP=2464;DP4=1178,1152,11,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67969e-08;MQSB=0.999741;RPB=0.999393;SGB=20.9896;VDB=0.810923;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gAg|V68E|144|LOC_Os10g38150|protein_coding|CODING|LOC_Os10g38150.1|1|1) FN3515-S.SNP.10:20435382 chr10:020435382 0 W/20435382-20435382 FN3515-S SNP C -> T AC=1;AN=188;BQB=0.839832;DP=2470;DP4=1212,1187,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.18925e-07;MQSB=0.98807;RPB=0.677344;SGB=44.4357;VDB=0.887548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V68M|144|LOC_Os10g38150|protein_coding|CODING|LOC_Os10g38150.1|1|1) FN795-S.SNP.10:20442376 chr10:020442376 0 W/20442376-20442376 FN795-S Single Base Substitution G-A INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2348.SNP.10:20447183 chr10:020447183 0 W/20447183-20447183 FN2348 SNP G -> A AC=1;AN=192;BQB=0.470716;DP=1925;DP4=40,1775,1,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.29466e-07;MQSB=0.97397;RPB=0.796574;SGB=53.7748;VDB=0.274794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.10:20448428 chr10:020448428 0 W/20448428-20448428 FN1082-S Single Base Substitution T-C INTERGENIC HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN-364.SNP.10:20448761 chr10:020448761 0 W/20448761-20448761 FN-364 Single Base Substitution C-T INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2715-S.SNP.10:20488813 chr10:020488813 0 W/20488813-20488813 FN2715-S SNP G -> C AC=1;AN=200;BQB=0.932637;DP=5040;DP4=2723,2067,7,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.31925e-12;MQSB=0.742708;RPB=0.603516;SGB=104.921;VDB=0.180717;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L8|239|LOC_Os10g38340|protein_coding|CODING|LOC_Os10g38340.1|1|1) FN-155.SNP.10:20489975 chr10:020489975 0 W/20489975-20489975 FN-155 Single Base Substitution G-C INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN2360.SNP.10:20491339 chr10:020491339 0 W/20491339-20491339 FN2360 SNP G -> A AC=1;AN=192;BQB=0.835373;DP=5287;DP4=2378,2624,12,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.98685e-12;MQSB=0.957981;RPB=0.937326;SGB=-38.3774;VDB=0.601843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.10:20496538 chr10:020496538 0 W/20496538-20496538 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.637552;DP=3897;DP4=1963,1697,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.61613e-06;MQSB=0.997645;RPB=0.960638;SGB=35.7638;VDB=0.635556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.10:20502436 chr10:020502436 0 W/20502436-20502436 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.781746;DP=4537;DP4=2526,1769,9,16;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0108001;MQB=8.55376e-07;MQSB=3.65447e-27;RPB=0.865697;SGB=79.6954;VDB=0.527169;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.10:20510952 chr10:020510952 0 W/20510952-20510952 FN-70 Single Base Substitution C-G INTERGENIC HOMO SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2327.SNP.10:20511629 chr10:020511629 0 W/20511629-20511629 FN2327 SNP C -> T AC=1;AN=192;BQB=0.0595967;DP=4573;DP4=2203,1967,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000218675;MQB=5.45421e-09;MQSB=0.00155558;RPB=0.84335;SGB=22.9983;VDB=0.365626;EFF=UTR_3_PRIME(MODIFIER||4||89|LOC_Os10g38570|protein_coding|CODING|LOC_Os10g38570.1|1|1) FN886-S.SNP.10:20512195 chr10:020512195 0 W/20512195-20512195 FN886-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g38386 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN473-S.SNP.10:20517900 chr10:020517900 0 W/20517900-20517900 FN473-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g38402 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1537-S.SNP.10:20519626 chr10:020519626 0 W/20519626-20519626 FN1537-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g38402 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3690-S.SNP.10:20519687 chr10:020519687 0 W/20519687-20519687 FN3690-S SNP T -> A AC=1;AN=190;BQB=0.93379;DP=3059;DP4=1539,1415,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.0424975;MQB=0.625077;MQSB=6.48883e-07;RPB=0.364746;SGB=25.439;VDB=0.946753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L930H|1666|LOC_Os10g38402|protein_coding|CODING|LOC_Os10g38402.1|4|1) FN-387.SNP.10:20523490 chr10:020523490 0 W/20523490-20523490 FN-387 Single Base Substitution C-T INTERGENIC HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1438-S.SNP.10:20523759 chr10:020523759 0 W/20523759-20523759 FN1438-S Single Base Substitution C-T INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4068-S.SNP.10:20528523 chr10:020528523 0 W/20528523-20528523 FN4068-S SNP C -> T AC=1;AN=182;BQB=0.704065;DP=2648;DP4=1142,1374,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000377644;MQB=0.000644271;MQSB=0.95837;RPB=0.0401307;SGB=30.5793;VDB=0.0367379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L71F|251|LOC_Os10g38420|protein_coding|CODING|LOC_Os10g38420.1|1|1) FN2094-S.SNP.10:20531475 chr10:020531475 0 W/20531475-20531475 FN2094-S SNP C -> A AC=2;AN=168;BQB=0.969598;DP=2849;DP4=1722,1073,19,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000351;MQB=3.17755e-17;MQSB=0.137632;RPB=0.911588;SGB=37.0995;VDB=0.759065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.10:20531475 chr10:020531475 0 W/20531475-20531475 FN3925-S SNP C -> A AC=2;AN=158;BQB=0.999143;DP=2543;DP4=1242,1091,32,30;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.02971e-30;MQSB=0.614146;RPB=0.789339;SGB=189.47;VDB=0.759421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.10:20537528 chr10:020537528 0 W/20537528-20537528 FN1323-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN-249.SNP.10:20539392 chr10:020539392 0 W/20539392-20539392 FN-249 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g38450 receptor-like protein kinase 2 precursor, putative, expressed SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-249.SNP.10:20539393 chr10:020539393 0 W/20539393-20539393 FN-249 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g38450 receptor-like protein kinase 2 precursor, putative, expressed SNo: 248, Mutant_ID: FN-249, Generation: M2, Mutations: 46, Genes: 138, Seed availability: Yes. FN-189.SNP.10:20541353 chr10:020541353 0 W/20541353-20541353 FN-189 Single Base Substitution T-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2791-S.SNP.10:20542303 chr10:020542303 0 W/20542303-20542303 FN2791-S SNP A -> T AC=2;AN=198;BQB=0.786685;DP=4070;DP4=1965,1859,24,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.37427e-23;MQSB=0.479199;RPB=0.952104;SGB=187.402;VDB=0.228109;EFF=INTERGENIC(MODIFIER||||||||||1) FN1142-S.SNP.10:20548092 chr10:020548092 0 W/20548092-20548092 FN1142-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2725-S.SNP.10:20563734 chr10:020563734 0 W/20563734-20563734 FN2725-S SNP C -> A AC=2;AN=200;BQB=0.39679;DP=5123;DP4=2415,2423,22,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.82368e-19;MQSB=0.265726;RPB=0.457146;SGB=51.2243;VDB=0.461899;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.10:20569570 chr10:020569570 0 W/20569570-20569570 FN4138-S SNP T -> C AC=2;AN=170;BQB=0.492302;DP=2822;DP4=1611,1122,6,15;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.0758327;MQB=0.771295;MQSB=2.68233e-34;RPB=0.785636;SGB=87.856;VDB=0.164308;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.10:20577099 chr10:020577099 0 W/20577099-20577099 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.996223;DP=4350;DP4=1986,2077,11,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.48647e-10;MQSB=0.943325;RPB=0.593548;SGB=67.9293;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.10:20578648 chr10:020578648 0 W/20578648-20578648 FN2438 SNP G -> A AC=2;AN=200;BQB=0.305585;DP=5228;DP4=2490,2328,24,22;HOB=0.0198;ICB=0.495051;MQ=20;MQ0F=0.28443;MQB=0.85572;MQSB=1.64352e-35;RPB=0.731665;SGB=54.4347;VDB=0.0628282;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.10:20578649 chr10:020578649 0 W/20578649-20578649 FN2438 SNP T -> A AC=2;AN=200;BQB=0.153145;DP=5233;DP4=2194,2321,26,19;HOB=0.0198;ICB=0.495051;MQ=20;MQ0F=0.273648;MQB=0.999456;MQSB=6.93686e-32;RPB=0.317741;SGB=52.8295;VDB=0.145069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.10:20578650 chr10:020578650 0 W/20578650-20578650 FN2438 SNP T -> A AC=2;AN=200;BQB=0.932032;DP=5260;DP4=2418,2353,21,21;HOB=0.0198;ICB=0.495051;MQ=20;MQ0F=0.284791;MQB=0.959888;MQSB=2.05758e-34;RPB=0.698916;SGB=141.214;VDB=0.171104;EFF=INTERGENIC(MODIFIER||||||||||1) FN3867-S.SNP.10:20587680 chr10:020587680 0 W/20587680-20587680 FN3867-S SNP C -> T AC=1;AN=158;BQB=0.32001;DP=2617;DP4=1202,1320,7,12;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=4.01479e-06;MQSB=0.9765;RPB=0.999583;SGB=77.6532;VDB=0.803803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.10:20588353 chr10:020588353 0 W/20588353-20588353 FN2440 SNP C -> T AC=1;AN=200;BQB=0.00736293;DP=2972;DP4=1545,938,6,9;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0114401;MQB=0.0222986;MQSB=0;RPB=0.856608;SGB=-14.9257;VDB=0.140698;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.10:20591183 chr10:020591183 0 W/20591183-20591183 FN1639-S Single Base Substitution G-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN2724-S.SNP.10:20595096 chr10:020595096 0 W/20595096-20595096 FN2724-S SNP G -> C AC=1;AN=200;BQB=0.751692;DP=5128;DP4=2701,2151,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69899e-05;MQSB=0.985764;RPB=0.423157;SGB=31.2392;VDB=0.476212;EFF=START_GAINED(LOW||||238|LOC_Os10g38600|protein_coding|CODING|LOC_Os10g38600.1|1|1),UTR_5_PRIME(MODIFIER||9||238|LOC_Os10g38600|protein_coding|CODING|LOC_Os10g38600.1|1|1) FN2410.SNP.10:20596721 chr10:020596721 0 W/20596721-20596721 FN2410 SNP A -> T AC=2;AN=200;BQB=0.540396;DP=4895;DP4=2084,2494,25,43;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.2609e-40;MQSB=0.928653;RPB=0.423297;SGB=307.549;VDB=0.0382334;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.10:20602291 chr10:020602291 0 W/20602291-20602291 FN4078-S SNP G -> A AC=2;AN=182;BQB=0.518347;DP=2758;DP4=1277,1372,9,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.19669e-09;MQSB=0.997793;RPB=0.83161;SGB=35.6984;VDB=0.904348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.10:20613565 chr10:020613565 0 W/20613565-20613565 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.355943;DP=3500;DP4=1745,1537,14,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00171429;MQB=2.04134e-13;MQSB=0.102295;RPB=0.7723;SGB=136.856;VDB=0.971485;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.10:20621627 chr10:020621627 0 W/20621627-20621627 FN2165-S SNP T -> A AC=1;AN=168;BQB=0.00260137;DP=4002;DP4=1797,2152,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.88687e-08;MQSB=0.142553;RPB=0.910263;SGB=-328.596;VDB=0.491371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1699-S.SNP.10:20624597 chr10:020624597 0 W/20624597-20624597 FN1699-S SNP T -> C AC=1;AN=188;BQB=0.159697;DP=3801;DP4=1674,2106,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000145069;MQSB=0.994763;RPB=0.408821;SGB=18.4463;VDB=0.634227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.10:20627339 chr10:020627339 0 W/20627339-20627339 FN1008-S Single Base Substitution C-A INTERGENIC HOMO SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2782-S.SNP.10:20628177 chr10:020628177 0 W/20628177-20628177 FN2782-S SNP G -> T AC=1;AN=198;BQB=0.998361;DP=4314;DP4=1890,2211,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.46306e-12;MQSB=0.972096;RPB=0.729191;SGB=61.7198;VDB=0.0446829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1475-S.SNP.10:20628203 chr10:020628203 0 W/20628203-20628203 FN1475-S Single Base Substitution G-A INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN574-S.SNP.10:20633267 chr10:020633267 0 W/20633267-20633267 FN574-S Single Base Substitution C-A INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN574-S.SNP.10:20633268 chr10:020633268 0 W/20633268-20633268 FN574-S Single Base Substitution G-A INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN3753-S.SNP.10:20635936 chr10:020635936 0 W/20635936-20635936 FN3753-S SNP T -> C AC=1;AN=190;BQB=0.907706;DP=3237;DP4=1609,1516,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.68078e-10;MQSB=0.985604;RPB=0.599655;SGB=43.2083;VDB=0.897649;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.10:20637627 chr10:020637627 0 W/20637627-20637627 FN-237 Single Base Substitution C-T INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN1121-S.SNP.10:20637967 chr10:020637967 0 W/20637967-20637967 FN1121-S Single Base Substitution G-A INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2328.SNP.10:20638794 chr10:020638794 0 W/20638794-20638794 FN2328 SNP C -> T AC=2;AN=192;BQB=0.0821436;DP=4729;DP4=2322,2081,24,29;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.80757e-26;MQSB=0.99417;RPB=0.998313;SGB=121.23;VDB=0.436667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.10:20641465 chr10:020641465 0 W/20641465-20641465 FN1557-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os10g38750 transposon protein, putative, Mutator sub-class, expressed SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2664-S.SNP.10:20642242 chr10:020642242 0 W/20642242-20642242 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.788348;DP=4964;DP4=2351,2310,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.57224e-10;MQSB=0.983267;RPB=0.655648;SGB=58.2954;VDB=0.899889;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W740*|835|LOC_Os10g38750|protein_coding|CODING|LOC_Os10g38750.1|4|1) FN4070-S.SNP.10:20642461 chr10:020642461 0 W/20642461-20642461 FN4070-S SNP G -> T AC=1;AN=182;BQB=0.999723;DP=2919;DP4=1380,1400,10,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.74287e-13;MQSB=0.968128;RPB=0.963462;SGB=102.753;VDB=0.540177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R813M|835|LOC_Os10g38750|protein_coding|CODING|LOC_Os10g38750.1|4|1) FN2444.SNP.10:20642842 chr10:020642842 0 W/20642842-20642842 FN2444 SNP G -> A AC=1;AN=200;BQB=0.388722;DP=4545;DP4=1951,2369,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000220022;MQB=2.58546e-12;MQSB=0.586544;RPB=0.998082;SGB=50.3263;VDB=0.949019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.10:20675862 chr10:020675862 0 W/20675862-20675862 FN2496 SNP T -> C AC=1;AN=200;BQB=0.949633;DP=4020;DP4=1605,2166,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76873e-10;MQSB=0.04543;RPB=0.999824;SGB=61.9006;VDB=0.0983212;EFF=INTRON(MODIFIER||||341|LOC_Os10g38834|protein_coding|CODING|LOC_Os10g38834.1|1|1) FN2198-S.SNP.10:20679397 chr10:020679397 0 W/20679397-20679397 FN2198-S SNP T -> A AC=1;AN=190;BQB=0.708321;DP=4874;DP4=2238,2354,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40835e-08;MQSB=0.999951;RPB=0.978398;SGB=7.21887;VDB=0.756532;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.10:20692172 chr10:020692172 0 W/20692172-20692172 FN2305 SNP G -> T AC=1;AN=192;BQB=0.972859;DP=4548;DP4=2399,1912,17,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.50661e-18;MQSB=0.999038;RPB=0.913622;SGB=57.1218;VDB=0.151503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.10:20692173 chr10:020692173 0 W/20692173-20692173 FN2305 SNP A -> T AC=1;AN=192;BQB=0.847988;DP=4561;DP4=2341,1833,17,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.93388e-18;MQSB=0.976942;RPB=0.987809;SGB=-6.8678;VDB=0.188541;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.10:20692369 chr10:020692369 0 W/20692369-20692369 FN1209-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1014-S.SNP.10:20692777 chr10:020692777 0 W/20692777-20692777 FN1014-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1630-S.SNP.10:20697641 chr10:020697641 0 W/20697641-20697641 FN1630-S Single Base Substitution C-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN596-S.SNP.10:20698640 chr10:020698640 0 W/20698640-20698640 FN596-S Single Base Substitution C-T INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN2447.SNP.10:20699822 chr10:020699822 0 W/20699822-20699822 FN2447 SNP T -> C AC=1;AN=200;BQB=0.750664;DP=4805;DP4=2430,2140,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.55409e-09;MQSB=0.995422;RPB=0.555344;SGB=26.8797;VDB=0.10895;EFF=INTERGENIC(MODIFIER||||||||||1) FN-348.SNP.10:20708901 chr10:020708901 0 W/20708901-20708901 FN-348 Single Base Substitution C-T INTERGENIC HET SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1389-S.SNP.10:20709105 chr10:020709105 0 W/20709105-20709105 FN1389-S Single Base Substitution T-G INTERGENIC Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3382-S.SNP.10:20713315 chr10:020713315 0 W/20713315-20713315 FN3382-S SNP G -> C AC=2;AN=184;BQB=0.825706;DP=3239;DP4=1232,1853,10,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.63003e-17;MQSB=0.941146;RPB=0.986391;SGB=148.222;VDB=0.890634;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.10:20714409 chr10:020714409 0 W/20714409-20714409 FN907-S Single Base Substitution T-A INTERGENIC HOMO SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN343-S.SNP.10:20727808 chr10:020727808 0 W/20727808-20727808 FN343-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g38900 erythronate-4-phosphate dehydrogenase, putative, expressed SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3668-S.SNP.10:20737524 chr10:020737524 0 W/20737524-20737524 FN3668-S SNP T -> A AC=2;AN=190;BQB=0.915289;DP=2273;DP4=1049,942,16,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.66834e-15;MQSB=0.949019;RPB=0.980343;SGB=36.3856;VDB=0.390971;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L170H|336|LOC_Os10g38930|protein_coding|CODING|LOC_Os10g38930.1|1|1) FN2347.SNP.10:20740623 chr10:020740623 0 W/20740623-20740623 FN2347 SNP G -> T AC=1;AN=192;BQB=0.999975;DP=5231;DP4=2347,2321,17,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.60812e-19;MQSB=0.8381;RPB=0.377182;SGB=-81.7287;VDB=0.584687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.10:20741098 chr10:020741098 0 W/20741098-20741098 FN3807-S SNP C -> T AC=1;AN=190;BQB=0.686392;DP=2779;DP4=1276,1361,4,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.85558e-07;MQSB=0.995569;RPB=0.706094;SGB=39.6545;VDB=0.229729;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.10:20743550 chr10:020743550 0 W/20743550-20743550 FN2187-S SNP G -> A AC=2;AN=190;BQB=0.998739;DP=4886;DP4=1821,2642,24,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.87001e-28;MQSB=0.943102;RPB=0.605731;SGB=8.9331;VDB=0.195663;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.10:20743550 chr10:020743550 0 W/20743550-20743550 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.936761;DP=3151;DP4=1476,1587,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.01094e-06;MQSB=0.915436;RPB=0.852044;SGB=48.979;VDB=0.441617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-169.SNP.10:20743565 chr10:020743565 0 W/20743565-20743565 FN-169 Single Base Substitution C-A INTERGENIC HET SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN-138.SNP.10:20744448 chr10:020744448 0 W/20744448-20744448 FN-138 Single Base Substitution C-T UTR_5_PRIME HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN2653-S.SNP.10:20750109 chr10:020750109 0 W/20750109-20750109 FN2653-S SNP A -> G AC=1;AN=200;BQB=0.674238;DP=5098;DP4=2502,2348,10,17;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000196155;MQB=5.92433e-13;MQSB=0.920752;RPB=0.962635;SGB=118.737;VDB=0.26062;EFF=INTERGENIC(MODIFIER||||||||||1) FN_815-4-1.SNP.10:20755009 chr10:020755009 0 W/20755009-20755009 FN_815-4-1 Single Base Substitution G-A HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3887-S.SNP.10:20761356 chr10:020761356 0 W/20761356-20761356 FN3887-S SNP G -> A AC=1;AN=158;BQB=0.676492;DP=2396;DP4=1170,1127,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.63287e-08;MQSB=0.369032;RPB=0.998684;SGB=54.2901;VDB=0.680178;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.10:20765509 chr10:020765509 0 W/20765509-20765509 FN-164 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g38960 lectin-like receptor kinase, putative, expressed SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1282-S.SNP.10:20768531 chr10:020768531 0 W/20768531-20768531 FN1282-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN1121-S.SNP.10:20777089 chr10:020777089 0 W/20777089-20777089 FN1121-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3294-S.SNP.10:20779269 chr10:020779269 0 W/20779269-20779269 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.981578;DP=2698;DP4=1326,1310,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.21785e-07;MQSB=0.995656;RPB=0.986403;SGB=39.699;VDB=0.359729;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.10:20785914 chr10:020785914 0 W/20785914-20785914 FN508-S Single Base Substitution T-A INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN-246.SNP.10:20788262 chr10:020788262 0 W/20788262-20788262 FN-246 Single Base Substitution G-A INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN351-S.SNP.10:20790324 chr10:020790324 0 W/20790324-20790324 FN351-S Single Base Substitution G-A INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1247-S.SNP.10:20801648 chr10:020801648 0 W/20801648-20801648 FN1247-S Single Base Substitution A-T INTERGENIC HET SNo: 1066, Mutant_ID: FN1247-S, Generation: M2, Mutations: 49, Genes: 30, Seed availability: Yes. FN1600-S.SNP.10:20803078 chr10:020803078 0 W/20803078-20803078 FN1600-S Single Base Substitution A-G INTRON HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2650-S.SNP.10:20815000 chr10:020815000 0 W/20815000-20815000 FN2650-S SNP G -> A AC=2;AN=200;BQB=0.730462;DP=4709;DP4=2208,2089,25,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.32883e-22;MQSB=0.967465;RPB=0.953722;SGB=123.188;VDB=0.125486;EFF=INTERGENIC(MODIFIER||||||||||1) FN760-S.SNP.10:20816287 chr10:020816287 0 W/20816287-20816287 FN760-S Single Base Substitution C-T INTERGENIC HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN553-S.SNP.10:20820934 chr10:020820934 0 W/20820934-20820934 FN553-S Single Base Substitution C-A INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN2536-S.SNP.10:20822716 chr10:020822716 0 W/20822716-20822716 FN2536-S SNP A -> T AC=1;AN=198;BQB=0.689883;DP=4522;DP4=2088,2203,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.2894e-08;MQSB=0.8642;RPB=0.932107;SGB=32.9588;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.10:20823083 chr10:020823083 0 W/20823083-20823083 FN3700-S SNP A -> T AC=1;AN=190;BQB=0.677755;DP=3140;DP4=1538,1474,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20016e-11;MQSB=0.897112;RPB=0.37605;SGB=49.1985;VDB=0.0927104;EFF=INTERGENIC(MODIFIER||||||||||1) FN3693-S.SNP.10:20825394 chr10:020825394 0 W/20825394-20825394 FN3693-S SNP C -> T AC=1;AN=190;BQB=0.947191;DP=2805;DP4=1377,1319,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69543e-11;MQSB=0.758214;RPB=0.146101;SGB=-36.3245;VDB=0.160737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M495I|581|LOC_Os10g39070|protein_coding|CODING|LOC_Os10g39070.1|2|1) FN2461.SNP.10:20830440 chr10:020830440 0 W/20830440-20830440 FN2461 SNP C -> A AC=1;AN=200;BQB=0.531527;DP=3928;DP4=1752,1737,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.93201e-06;MQSB=0.52402;RPB=0.978764;SGB=21.6694;VDB=0.273871;EFF=INTRON(MODIFIER||||808|LOC_Os10g39080|protein_coding|CODING|LOC_Os10g39080.1|3|1) FN3824-S.SNP.10:20832284 chr10:020832284 0 W/20832284-20832284 FN3824-S SNP C -> T AC=2;AN=190;BQB=0.925781;DP=3661;DP4=1732,1780,17,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.70327e-17;MQSB=0.970913;RPB=0.793902;SGB=158.388;VDB=0.545252;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A133|808|LOC_Os10g39080|protein_coding|CODING|LOC_Os10g39080.1|1|1) FN4128-S.SNP.10:20833789 chr10:020833789 0 W/20833789-20833789 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.733953;DP=2908;DP4=1551,1275,2,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.0001747;MQSB=0.729921;RPB=0.908479;SGB=39.6007;VDB=0.975524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A73T|95|LOC_Os10g39084|protein_coding|CODING|LOC_Os10g39084.1|2|1) FN979-S.SNP.10:20837211 chr10:020837211 0 W/20837211-20837211 FN979-S Single Base Substitution T-C INTERGENIC HOMO SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN3507-S.SNP.10:20841611 chr10:020841611 0 W/20841611-20841611 FN3507-S SNP G -> T AC=1;AN=188;BQB=0.92019;DP=2892;DP4=1407,1411,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.44054e-08;MQSB=0.985905;RPB=0.979913;SGB=32.441;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.10:20842364 chr10:020842364 0 W/20842364-20842364 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.806889;DP=4729;DP4=2257,2192,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57746e-15;MQSB=0.810844;RPB=0.822411;SGB=52.9314;VDB=0.227076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1602-S.SNP.10:20860785 chr10:020860785 0 W/20860785-20860785 FN1602-S Single Base Substitution G-T INTERGENIC Homo SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1315-S.SNP.10:20872318 chr10:020872318 0 W/20872318-20872318 FN1315-S Single Base Substitution A-G INTRON HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1089-S.SNP.10:20874999 chr10:020874999 0 W/20874999-20874999 FN1089-S Single Base Substitution C-T INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN1280-S.SNP.10:20880511 chr10:020880511 0 W/20880511-20880511 FN1280-S Single Base Substitution T-C INTERGENIC HET SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2711-S.SNP.10:20880981 chr10:020880981 0 W/20880981-20880981 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.941861;DP=4849;DP4=2300,2201,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.61362e-13;MQSB=0.771192;RPB=0.785554;SGB=17.5158;VDB=0.764262;EFF=INTERGENIC(MODIFIER||||||||||1) FN569-S.SNP.10:20885221 chr10:020885221 0 W/20885221-20885221 FN569-S Single Base Substitution G-A INTERGENIC HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN412-S.SNP.10:20890920 chr10:020890920 0 W/20890920-20890920 FN412-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g39140 flavonol synthase/flavanone 3-hydroxylase, putative, expressed SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1720-S.SNP.10:20894606 chr10:020894606 0 W/20894606-20894606 FN1720-S SNP G -> A AC=2;AN=188;BQB=0.00286329;DP=4043;DP4=2359,1588,43,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.22955e-11;MQSB=0.603668;RPB=0.24876;SGB=-1254.23;VDB=0.315568;EFF=INTRON(MODIFIER||||172|LOC_Os10g39150|protein_coding|CODING|LOC_Os10g39150.1|4|1) FN3811-S.SNP.10:20903364 chr10:020903364 0 W/20903364-20903364 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.585171;DP=2999;DP4=1127,1748,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.64562e-13;MQSB=0.999357;RPB=0.905353;SGB=51.7524;VDB=0.893577;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.10:20905829 chr10:020905829 0 W/20905829-20905829 FN-144 Single Base Substitution T-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3938-S.SNP.10:20907248 chr10:020907248 0 W/20907248-20907248 FN3938-S SNP C -> A AC=1;AN=158;BQB=0.910357;DP=2679;DP4=1372,1206,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.66163e-08;MQSB=0.989639;RPB=0.195701;SGB=68.9144;VDB=0.872981;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.10:20914672 chr10:020914672 0 W/20914672-20914672 FN3568-S SNP T -> A AC=1;AN=188;BQB=0.501494;DP=2729;DP4=1239,1415,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.39809e-07;MQSB=0.999881;RPB=0.999902;SGB=46.6141;VDB=0.817527;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.10:20921731 chr10:020921731 0 W/20921731-20921731 FN2172-S SNP T -> A AC=2;AN=168;BQB=0.32964;DP=3825;DP4=2073,1623,21,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.6045e-15;MQSB=0.999635;RPB=0.999595;SGB=-8.04863;VDB=0.00693674;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.10:20926129 chr10:020926129 0 W/20926129-20926129 FN1006-S Single Base Substitution C-T INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN3474-S.SNP.10:20926445 chr10:020926445 0 W/20926445-20926445 FN3474-S SNP T -> G AC=2;AN=184;BQB=0.935265;DP=3179;DP4=1394,1563,25,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.6594e-26;MQSB=0.973401;RPB=0.899966;SGB=94.6952;VDB=0.474033;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.10:20938445 chr10:020938445 0 W/20938445-20938445 FN1374-S Single Base Substitution T-C INTRON Homo SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3486-S.SNP.10:20945077 chr10:020945077 0 W/20945077-20945077 FN3486-S SNP T -> A AC=1;AN=184;BQB=0.926791;DP=2830;DP4=1484,1237,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07668e-11;MQSB=0.902899;RPB=0.0770357;SGB=56.8786;VDB=0.809966;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K425I|1361|LOC_Os10g39230|protein_coding|CODING|LOC_Os10g39230.1|3|1) FN1337-S.SNP.10:20948376 chr10:020948376 0 W/20948376-20948376 FN1337-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2729-S.SNP.10:20949319 chr10:020949319 0 W/20949319-20949319 FN2729-S SNP C -> G AC=1;AN=200;BQB=0.801273;DP=4253;DP4=2107,1914,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000139802;MQSB=7.47521e-31;RPB=0.857734;SGB=45.0543;VDB=0.870636;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.10:20951101 chr10:020951101 0 W/20951101-20951101 FN1392-S Single Base Substitution C-T INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2165-S.SNP.10:20951784 chr10:020951784 0 W/20951784-20951784 FN2165-S SNP G -> A AC=1;AN=168;BQB=0.524369;DP=2242;DP4=1281,858,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00669046;MQB=0.121733;MQSB=0.0104153;RPB=0.587017;SGB=-0.101747;VDB=0.234327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-S.SNP.10:20959440 chr10:020959440 0 W/20959440-20959440 FN1136-S Single Base Substitution G-C INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN-177.SNP.10:20960731 chr10:020960731 0 W/20960731-20960731 FN-177 Single Base Substitution C-T INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN2475.SNP.10:20967114 chr10:020967114 0 W/20967114-20967114 FN2475 SNP T -> A AC=1;AN=200;BQB=0.349457;DP=4924;DP4=2435,2155,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.55876e-13;MQSB=0.572826;RPB=0.909865;SGB=65.5058;VDB=0.160902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.10:20968265 chr10:020968265 0 W/20968265-20968265 FN2226-S SNP A -> G AC=1;AN=190;BQB=0.584175;DP=4176;DP4=1893,1829,16,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.21619e-16;MQSB=0.895002;RPB=0.187211;SGB=30.527;VDB=0.0125102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.10:20968431 chr10:020968431 0 W/20968431-20968431 FN3701-S SNP C -> T AC=1;AN=190;BQB=0.789016;DP=2755;DP4=1564,1093,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.32453e-09;MQSB=0.040901;RPB=0.988577;SGB=50.3161;VDB=0.154289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2247-S.SNP.10:20971615 chr10:020971615 0 W/20971615-20971615 FN2247-S SNP G -> A AC=2;AN=190;BQB=0.205826;DP=3937;DP4=1762,1758,22,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.71351e-13;MQSB=0.710515;RPB=0.702083;SGB=167.496;VDB=0.227514;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E104|394|LOC_Os10g39300|protein_coding|CODING|LOC_Os10g39300.1|1|1) FN1509-S.SNP.10:20976818 chr10:020976818 0 W/20976818-20976818 FN1509-S Single Base Substitution G-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN803-S.SNP.10:20978550 chr10:020978550 0 W/20978550-20978550 FN803-S Single Base Substitution G-T INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN4075-S.SNP.10:20980074 chr10:020980074 0 W/20980074-20980074 FN4075-S SNP G -> C AC=1;AN=182;BQB=0.956623;DP=2857;DP4=1517,1275,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000236384;MQSB=0.969799;RPB=0.321355;SGB=30.5793;VDB=0.0907041;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R338T|382|LOC_Os10g39310|protein_coding|CODING|LOC_Os10g39310.1|1|1) FN3446-S.SNP.10:20981312 chr10:020981312 0 W/20981312-20981312 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.867061;DP=2240;DP4=1051,1139,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.41206e-05;MQSB=0.954714;RPB=0.979193;SGB=39.699;VDB=0.262342;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.10:20982976 chr10:020982976 0 W/20982976-20982976 FN4070-S SNP G -> C AC=1;AN=182;BQB=0.780212;DP=3223;DP4=1570,1561,9,17;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.75028e-12;MQSB=0.854013;RPB=0.0832503;SGB=81.2689;VDB=0.026715;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.10:20986732 chr10:020986732 0 W/20986732-20986732 FN3715-S SNP C -> T AC=1;AN=190;BQB=0.931966;DP=2429;DP4=801,1541,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03426e-05;MQSB=0.209388;RPB=0.705285;SGB=21.8853;VDB=0.910508;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.10:20987806 chr10:020987806 0 W/20987806-20987806 FN1261-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1426-S.SNP.10:20990397 chr10:020990397 0 W/20990397-20990397 FN1426-S Single Base Substitution G-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN701-S.SNP.10:20993200 chr10:020993200 0 W/20993200-20993200 FN701-S Single Base Substitution G-T INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. W463-2-1.SNP.10:20995899 chr10:020995899 0 W/20995899-20995899 W463-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2237-S.SNP.10:21012618 chr10:021012618 0 W/21012618-21012618 FN2237-S SNP A -> C AC=1;AN=190;BQB=0.890255;DP=4166;DP4=1735,1819,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.98608e-13;MQSB=0.0153666;RPB=0.621391;SGB=82.301;VDB=0.714628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K208T|405|LOC_Os10g39390|protein_coding|CODING|LOC_Os10g39390.1|1|1) FN-168.SNP.10:21013177 chr10:021013177 0 W/21013177-21013177 FN-168 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1443-S.SNP.10:21013928 chr10:021013928 0 W/21013928-21013928 FN1443-S Single Base Substitution G-T INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1443-S.SNP.10:21013929 chr10:021013929 0 W/21013929-21013929 FN1443-S Single Base Substitution C-G INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3880-S.SNP.10:21021072 chr10:021021072 0 W/21021072-21021072 FN3880-S SNP A -> C AC=1;AN=158;BQB=0.92913;DP=3031;DP4=1239,1660,6,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.55594e-12;MQSB=0.765117;RPB=0.354036;SGB=86.3921;VDB=0.574088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.10:21022937 chr10:021022937 0 W/21022937-21022937 FN1112-S Single Base Substitution A-G INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN862-S.SNP.10:21037612 chr10:021037612 0 W/21037612-21037612 FN862-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g39430 expressed protein SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN4305-S.SNP.10:21048998 chr10:021048998 0 W/21048998-21048998 FN4305-S SNP T -> A AC=1;AN=170;BQB=0.526214;DP=2608;DP4=1230,1270,4,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.67669e-06;MQSB=0.365186;RPB=0.578986;SGB=70.0854;VDB=0.83796;EFF=INTRON(MODIFIER||||740|LOC_Os10g39440|protein_coding|CODING|LOC_Os10g39440.1|2|1),INTRON(MODIFIER||||445|LOC_Os10g39440|protein_coding|CODING|LOC_Os10g39440.2|2|1) FN3786-S.SNP.10:21051295 chr10:021051295 0 W/21051295-21051295 FN3786-S SNP G -> A AC=1;AN=190;BQB=0.145401;DP=2635;DP4=1332,1195,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000127622;MQSB=0.927312;RPB=0.956066;SGB=-3.65821;VDB=0.659505;EFF=INTRON(MODIFIER||||445|LOC_Os10g39440|protein_coding|CODING|LOC_Os10g39440.2|4|1),INTRON(MODIFIER||||740|LOC_Os10g39440|protein_coding|CODING|LOC_Os10g39440.1|4|1) FN224-S.SNP.10:21054394 chr10:021054394 0 W/21054394-21054394 FN224-S Single Base Substitution T-A INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN495-S.SNP.10:21054395 chr10:021054395 0 W/21054395-21054395 FN495-S Single Base Substitution A-T INTERGENIC HET SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN1326-S.SNP.10:21055399 chr10:021055399 0 W/21055399-21055399 FN1326-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2383.SNP.10:21058409 chr10:021058409 0 W/21058409-21058409 FN2383 SNP T -> C AC=1;AN=192;BQB=0.699178;DP=4742;DP4=2099,2389,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64738e-09;MQSB=0.991304;RPB=0.171811;SGB=-11.9469;VDB=0.138357;EFF=UTR_3_PRIME(MODIFIER||826||681|LOC_Os10g39460|protein_coding|CODING|LOC_Os10g39460.1|3|1),UTR_3_PRIME(MODIFIER||826||681|LOC_Os10g39460|protein_coding|CODING|LOC_Os10g39460.2|4|1) FN2109-S.SNP.10:21068466 chr10:021068466 0 W/21068466-21068466 FN2109-S SNP C -> A AC=1;AN=168;BQB=0.997116;DP=2108;DP4=727,1342,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.1921e-05;MQSB=0.958705;RPB=0.0658544;SGB=21.0249;VDB=0.0042011;EFF=UTR_5_PRIME(MODIFIER||630||260|LOC_Os10g39470|protein_coding|CODING|LOC_Os10g39470.1|1|1),UTR_5_PRIME(MODIFIER||630||243|LOC_Os10g39470|protein_coding|CODING|LOC_Os10g39470.2|1|1) FN3708-S.SNP.10:21076209 chr10:021076209 0 W/21076209-21076209 FN3708-S SNP A -> T AC=1;AN=190;BQB=0.935708;DP=2689;DP4=1198,1363,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.50158e-08;MQSB=0.981756;RPB=0.98939;SGB=49.0954;VDB=0.190927;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.10:21083617 chr10:021083617 0 W/21083617-21083617 FN4271-S SNP G -> A AC=1;AN=170;BQB=0.931215;DP=1875;DP4=913,687,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000533333;MQB=3.92844e-05;MQSB=2.2748e-11;RPB=0.390723;SGB=12.556;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.10:21085865 chr10:021085865 0 W/21085865-21085865 FN2482 SNP C -> T AC=1;AN=200;BQB=0.682804;DP=4744;DP4=2233,2189,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.44615e-06;MQSB=0.971639;RPB=0.78491;SGB=-14.3206;VDB=0.79644;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.10:21101074 chr10:021101074 0 W/21101074-21101074 FN2538-S SNP C -> A AC=1;AN=198;BQB=0.307836;DP=4411;DP4=2066,2058,16,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21679e-16;MQSB=0.862634;RPB=0.882554;SGB=-39.8795;VDB=0.211944;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.10:21101407 chr10:021101407 0 W/21101407-21101407 FN-117 Single Base Substitution C-T INTERGENIC HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN2177-S.SNP.10:21101407 chr10:021101407 0 W/21101407-21101407 FN2177-S SNP C -> T AC=2;AN=168;BQB=0.108352;DP=3437;DP4=1786,1592,17,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.00267e-14;MQSB=0.729421;RPB=0.413843;SGB=-88.4675;VDB=0.0471018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3725-S.SNP.10:21101407 chr10:021101407 0 W/21101407-21101407 FN3725-S SNP C -> T AC=2;AN=190;BQB=0.937046;DP=2783;DP4=1369,1284,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.25809e-16;MQSB=0.90326;RPB=0.957548;SGB=140.173;VDB=0.965479;EFF=INTERGENIC(MODIFIER||||||||||1) FN3944-S.SNP.10:21101713 chr10:021101713 0 W/21101713-21101713 FN3944-S SNP A -> G AC=1;AN=168;BQB=0.986647;DP=2709;DP4=1182,1412,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3753e-09;MQSB=0.821649;RPB=0.0318205;SGB=41.6096;VDB=0.0534589;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.10:21103305 chr10:021103305 0 W/21103305-21103305 FN4156-S SNP G -> A AC=2;AN=170;BQB=0.992261;DP=2617;DP4=1135,1374,7,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000382117;MQB=5.30914e-14;MQSB=0.915501;RPB=0.886301;SGB=101.184;VDB=0.540178;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.10:21107645 chr10:021107645 0 W/21107645-21107645 FN519-S Single Base Substitution T-C INTRON HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN449-S.SNP.10:21111695 chr10:021111695 0 W/21111695-21111695 FN449-S Single Base Substitution A-G INTRON HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN2587-S.SNP.10:21129320 chr10:021129320 0 W/21129320-21129320 FN2587-S SNP A -> G AC=1;AN=198;BQB=0.94373;DP=4538;DP4=2161,2109,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.46463e-17;MQSB=0.922801;RPB=0.985547;SGB=55.2955;VDB=0.368782;EFF=STOP_LOST(HIGH|MISSENSE|tgA/tgG|*198W|197|LOC_Os10g39540|protein_coding|CODING|LOC_Os10g39540.4|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E32G|195|LOC_Os10g39540|protein_coding|CODING|LOC_Os10g39540.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E166G|329|LOC_Os10g39540|protein_coding|CODING|LOC_Os10g39540.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E121G|284|LOC_Os10g39540|protein_coding|CODING|LOC_Os10g39540.3|4|1) FN-85.SNP.10:21133339 chr10:021133339 0 W/21133339-21133339 FN-85 Single Base Substitution G-T INTERGENIC HET SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN2780-S.SNP.10:21135259 chr10:021135259 0 W/21135259-21135259 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.657578;DP=4012;DP4=1947,1862,13,25;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.16967e-22;MQSB=0.93654;RPB=0.838069;SGB=41.2518;VDB=0.575002;EFF=INTRON(MODIFIER||||329|LOC_Os10g39550|protein_coding|CODING|LOC_Os10g39550.1|4|1) FN2711-S.SNP.10:21135881 chr10:021135881 0 W/21135881-21135881 FN2711-S SNP T -> A AC=1;AN=200;BQB=0.237463;DP=4756;DP4=2286,2281,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.95728e-12;MQSB=0.970651;RPB=0.833667;SGB=14.3054;VDB=0.420308;EFF=INTRON(MODIFIER||||329|LOC_Os10g39550|protein_coding|CODING|LOC_Os10g39550.1|4|1) FN757-S.SNP.10:21136893 chr10:021136893 0 W/21136893-21136893 FN757-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g39550 MYB family transcription factor, putative, expressed SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN3949-S.SNP.10:21140916 chr10:021140916 0 W/21140916-21140916 FN3949-S SNP C -> A AC=1;AN=168;BQB=0.983392;DP=1999;DP4=816,1108,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000195036;MQSB=0.0949488;RPB=0.940898;SGB=25.5891;VDB=0.914575;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.10:21146506 chr10:021146506 0 W/21146506-21146506 FN2235-S SNP T -> C AC=1;AN=190;BQB=0.117047;DP=5073;DP4=2200,2495,16,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21045e-18;MQSB=0.665562;RPB=0.342528;SGB=131.065;VDB=0.480449;EFF=INTRON(MODIFIER||||460|LOC_Os10g39560|protein_coding|CODING|LOC_Os10g39560.1|1|1) FN-189.SNP.10:21165216 chr10:021165216 0 W/21165216-21165216 FN-189 Single Base Substitution T-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3657-S.SNP.10:21177601 chr10:021177601 0 W/21177601-21177601 FN3657-S SNP A -> T AC=2;AN=190;BQB=0.395652;DP=2966;DP4=1511,1318,19,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=4.41727e-22;MQSB=0.014254;RPB=0.999628;SGB=79.845;VDB=0.760766;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.10:21177603 chr10:021177603 0 W/21177603-21177603 FN3657-S SNP C -> T AC=2;AN=190;BQB=0.364834;DP=2955;DP4=1523,1306,18,16;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=6.03042e-22;MQSB=0.0136435;RPB=0.99583;SGB=149.281;VDB=0.877645;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.10:21177609 chr10:021177609 0 W/21177609-21177609 FN3657-S SNP A -> T AC=2;AN=190;BQB=0.566152;DP=2983;DP4=1552,1326,18,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=5.02212e-23;MQSB=0.0120025;RPB=0.990603;SGB=121.394;VDB=0.88197;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.10:21186617 chr10:021186617 0 W/21186617-21186617 FN703-S Single Base Substitution C-T INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN-233.SNP.10:21186833 chr10:021186833 0 W/21186833-21186833 FN-233 Single Base Substitution T-G INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2566-S.SNP.10:21187773 chr10:021187773 0 W/21187773-21187773 FN2566-S SNP C -> T AC=1;AN=198;BQB=0.0369619;DP=3872;DP4=1967,1711,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.52615e-05;MQSB=0.886662;RPB=0.999993;SGB=44.9538;VDB=0.668534;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.10:21187774 chr10:021187774 0 W/21187774-21187774 FN2566-S SNP G -> T AC=1;AN=198;BQB=0.415481;DP=3864;DP4=1930,1710,9,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.23044e-07;MQSB=0.864917;RPB=0.88685;SGB=49.5489;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.10:21190817 chr10:021190817 0 W/21190817-21190817 FN3637-S SNP C -> A AC=2;AN=190;BQB=0.761856;DP=1896;DP4=1281,517,13,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16753e-07;MQSB=0.175713;RPB=0.489549;SGB=60.9777;VDB=0.417437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A283D|311|LOC_Os10g39660|protein_coding|CODING|LOC_Os10g39660.1|1|1) FN3848-S.SNP.10:21192515 chr10:021192515 0 W/21192515-21192515 FN3848-S SNP T -> C AC=2;AN=158;BQB=0.987527;DP=2620;DP4=1256,1250,12,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.9796e-15;MQSB=0.929802;RPB=0.878462;SGB=84.6152;VDB=0.844769;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.10:21195983 chr10:021195983 0 W/21195983-21195983 FN946-S Single Base Substitution G-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN946-S.SNP.10:21195984 chr10:021195984 0 W/21195984-21195984 FN946-S Single Base Substitution G-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2249-S.SNP.10:21197168 chr10:021197168 0 W/21197168-21197168 FN2249-S SNP G -> T AC=1;AN=190;BQB=0.982584;DP=4957;DP4=2395,2239,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.2205e-11;MQSB=0.010141;RPB=0.978026;SGB=64.5217;VDB=0.873495;EFF=INTERGENIC(MODIFIER||||||||||1) FN-172.SNP.10:21204933 chr10:021204933 0 W/21204933-21204933 FN-172 Single Base Substitution T-C INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN3516-S.SNP.10:21216783 chr10:021216783 0 W/21216783-21216783 FN3516-S SNP G -> T AC=1;AN=188;BQB=0.996604;DP=2868;DP4=1368,1438,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.0190762;MQSB=2.02122e-07;RPB=0.188582;SGB=53.5223;VDB=0.336041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.10:21218280 chr10:021218280 0 W/21218280-21218280 FN2574-S SNP C -> T AC=2;AN=198;BQB=0.934867;DP=4529;DP4=2349,1983,6,3;HOB=0.019998;ICB=0.495001;MQ=42;MQ0F=0;MQB=0.0158042;MQSB=1.09302e-07;RPB=0.543524;SGB=35.7638;VDB=0.204212;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.10:21220023 chr10:021220023 0 W/21220023-21220023 FN267-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os10g39700 CHIT15 - Chitinase family protein precursor, putative, expressed SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN4181-S.SNP.10:21223672 chr10:021223672 0 W/21223672-21223672 FN4181-S SNP G -> A AC=2;AN=170;BQB=0.244247;DP=2681;DP4=1395,1172,16,4;HOB=0.0232526;ICB=0.494188;MQ=35;MQ0F=0.000372995;MQB=0.16156;MQSB=0.445869;RPB=0.688846;SGB=58.9766;VDB=0.600085;EFF=INTERGENIC(MODIFIER||||||||||1) FN-164.SNP.10:21226608 chr10:021226608 0 W/21226608-21226608 FN-164 Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN1116-S.SNP.10:21239312 chr10:021239312 0 W/21239312-21239312 FN1116-S Single Base Substitution C-A INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN-212.SNP.10:21241750 chr10:021241750 0 W/21241750-21241750 FN-212 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g39744 PE-PGRS family protein, putative, expressed SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1396-S.SNP.10:21262167 chr10:021262167 0 W/21262167-21262167 FN1396-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN4247-S.SNP.10:21264263 chr10:021264263 0 W/21264263-21264263 FN4247-S SNP C -> T AC=1;AN=170;BQB=0.528542;DP=2547;DP4=1268,1197,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.22506e-05;MQSB=0.964885;RPB=0.993116;SGB=31.4354;VDB=0.943469;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.10:21266735 chr10:021266735 0 W/21266735-21266735 FN2638-S SNP C -> G AC=2;AN=200;BQB=0.837952;DP=5136;DP4=2487,2283,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.01978e-22;MQSB=0.816447;RPB=0.884455;SGB=-1.00683;VDB=0.836822;EFF=INTERGENIC(MODIFIER||||||||||1) FN925-S.SNP.10:21266827 chr10:021266827 0 W/21266827-21266827 FN925-S Single Base Substitution T-C INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN4145-S.SNP.10:21268472 chr10:021268472 0 W/21268472-21268472 FN4145-S SNP G -> A AC=2;AN=170;BQB=0.847162;DP=2857;DP4=1463,1248,16,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.79763e-13;MQSB=0.29357;RPB=0.927217;SGB=76.1898;VDB=0.467863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.10:21269311 chr10:021269311 0 W/21269311-21269311 FN1430-S Single Base Substitution A-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2611-S.SNP.10:21280639 chr10:021280639 0 W/21280639-21280639 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.984302;DP=3391;DP4=1273,1827,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000294898;MQB=2.20476e-05;MQSB=7.64684e-19;RPB=0.734814;SGB=45.0543;VDB=0.296572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.10:21281284 chr10:021281284 0 W/21281284-21281284 FN2282 SNP C -> A AC=2;AN=192;BQB=0.00382367;DP=4321;DP4=1854,1319,27,33;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=8.51852e-18;MQSB=7.0561e-05;RPB=0.855692;SGB=-115.937;VDB=0.0846628;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.10:21290599 chr10:021290599 0 W/21290599-21290599 FN343-S Single Base Substitution A-G INTERGENIC HOMO SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2083-S.SNP.10:21301983 chr10:021301983 0 W/21301983-21301983 FN2083-S SNP C -> G AC=1;AN=168;BQB=0.256248;DP=1906;DP4=1167,639,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000101569;MQSB=0.977136;RPB=0.42686;SGB=14.8923;VDB=0.990847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.10:21302523 chr10:021302523 0 W/21302523-21302523 FN1409-S Single Base Substitution G-A INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN_N1-151-7.SNP.10:21302577 chr10:021302577 0 W/21302577-21302577 FN_N1-151-7 Single Base Substitution A-T Homo SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN_949-1.SNP.10:21306352 chr10:021306352 0 W/21306352-21306352 FN_949-1 Single Base Substitution G-A Homo SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN2659-S.SNP.10:21306514 chr10:021306514 0 W/21306514-21306514 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.981736;DP=5530;DP4=2218,3008,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.08855e-11;MQSB=0.39744;RPB=0.9911;SGB=58.2954;VDB=0.809093;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.10:21314922 chr10:021314922 0 W/21314922-21314922 FN1037-S Single Base Substitution T-A INTRON HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1745-S.SNP.10:21315344 chr10:021315344 0 W/21315344-21315344 FN1745-S SNP G -> A AC=1;AN=188;BQB=0.466591;DP=2059;DP4=989,1028,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.94861e-07;MQSB=0.991175;RPB=0.998483;SGB=15.903;VDB=0.0827962;EFF=UTR_5_PRIME(MODIFIER||873||247|LOC_Os10g39820|protein_coding|CODING|LOC_Os10g39820.1|1|1) FN1186-S.SNP.10:21324754 chr10:021324754 0 W/21324754-21324754 FN1186-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g39850 zinc finger, C3HC4 type domain containing protein, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2575-S.SNP.10:21339204 chr10:021339204 0 W/21339204-21339204 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.989763;DP=4020;DP4=2008,1774,21,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.5145e-19;MQSB=0.790773;RPB=0.981853;SGB=155.237;VDB=0.90172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P95L|168|LOC_Os10g39890|protein_coding|CODING|LOC_Os10g39890.1|2|1) FN3561-S.SNP.10:21347166 chr10:021347166 0 W/21347166-21347166 FN3561-S SNP A -> G AC=2;AN=188;BQB=0.539142;DP=2856;DP4=1440,1323,28,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.20136e-24;MQSB=0.999474;RPB=0.981775;SGB=153.536;VDB=0.148303;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G878|1012|LOC_Os10g39900|protein_coding|CODING|LOC_Os10g39900.1|13|1) FN1230-S.SNP.10:21356078 chr10:021356078 0 W/21356078-21356078 FN1230-S Single Base Substitution A-G INTRON HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN959-S.SNP.10:21360027 chr10:021360027 0 W/21360027-21360027 FN959-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1576-S.SNP.10:21366455 chr10:021366455 0 W/21366455-21366455 FN1576-S Single Base Substitution A-G INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN-31.SNP.10:21371298 chr10:021371298 0 W/21371298-21371298 FN-31 Single Base Substitution A-G INTRON Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN1163-S.SNP.10:21380667 chr10:021380667 0 W/21380667-21380667 FN1163-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2622-S.SNP.10:21401687 chr10:021401687 0 W/21401687-21401687 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.674132;DP=4813;DP4=2219,2287,10,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45261e-19;MQSB=0.942897;RPB=0.640048;SGB=101.557;VDB=0.819858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.10:21401910 chr10:021401910 0 W/21401910-21401910 FN3945-S SNP C -> T AC=1;AN=168;BQB=0.921615;DP=2786;DP4=1306,1330,2,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.35365e-08;MQSB=0.658426;RPB=0.699876;SGB=34.748;VDB=0.815913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.10:21409725 chr10:021409725 0 W/21409725-21409725 FN2664-S SNP A -> G AC=1;AN=200;BQB=0.913953;DP=4781;DP4=2435,2084,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.9063e-11;MQSB=0.62422;RPB=0.71248;SGB=58.2954;VDB=0.838963;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.10:21423634 chr10:021423634 0 W/21423634-21423634 FN1037-S Single Base Substitution T-A INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2696-S.SNP.10:21433719 chr10:021433719 0 W/21433719-21433719 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.390726;DP=5198;DP4=2464,2402,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34438e-16;MQSB=0.707945;RPB=0.906433;SGB=20.7261;VDB=0.553459;EFF=INTERGENIC(MODIFIER||||||||||1) FN3480-S.SNP.10:21435155 chr10:021435155 0 W/21435155-21435155 FN3480-S SNP G -> T AC=2;AN=184;BQB=0.59445;DP=2367;DP4=1079,1207,13,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.89578e-13;MQSB=0.924386;RPB=0.847081;SGB=121.091;VDB=0.379741;EFF=UTR_3_PRIME(MODIFIER||275||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.1|11|1),UTR_3_PRIME(MODIFIER||275||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.2|10|1),UTR_3_PRIME(MODIFIER||275||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.3|11|1) FN1692-S.SNP.10:21435650 chr10:021435650 0 W/21435650-21435650 FN1692-S SNP G -> A AC=1;AN=188;BQB=0.790668;DP=3780;DP4=1895,1839,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16408e-09;MQSB=0.910563;RPB=0.968596;SGB=-37.8212;VDB=0.989195;EFF=INTRON(MODIFIER||||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.1|10|1),INTRON(MODIFIER||||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.2|9|1),INTRON(MODIFIER||||314|LOC_Os10g40020|protein_coding|CODING|LOC_Os10g40020.3|10|1) FN-183.SNP.10:21444894 chr10:021444894 0 W/21444894-21444894 FN-183 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g40040 expressed protein SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN2749-S.SNP.10:21456170 chr10:021456170 0 W/21456170-21456170 FN2749-S SNP T -> G AC=1;AN=200;BQB=0.661761;DP=5218;DP4=2317,2677,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78998e-16;MQSB=0.988548;RPB=0.993869;SGB=109.527;VDB=0.14549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M176L|688|LOC_Os10g40060|protein_coding|CODING|LOC_Os10g40060.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M145L|657|LOC_Os10g40060|protein_coding|CODING|LOC_Os10g40060.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M133L|645|LOC_Os10g40060|protein_coding|CODING|LOC_Os10g40060.3|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ctg|M133L|645|LOC_Os10g40060|protein_coding|CODING|LOC_Os10g40060.4|6|1) FN430-S.SNP.10:21457844 chr10:021457844 0 W/21457844-21457844 FN430-S Single Base Substitution T-C INTRON HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN947-S.SNP.10:21463149 chr10:021463149 0 W/21463149-21463149 FN947-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g40080 expressed protein SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN1459-S.SNP.10:21467441 chr10:021467441 0 W/21467441-21467441 FN1459-S Single Base Substitution G-A INTERGENIC HET SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN1065-S.SNP.10:21470423 chr10:021470423 0 W/21470423-21470423 FN1065-S Single Base Substitution G-T INTRON HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN-41.SNP.10:21476270 chr10:021476270 0 W/21476270-21476270 FN-41 Single Base Substitution A-T SYNONYMOUS_CODING Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN-124.SNP.10:21481690 chr10:021481690 0 W/21481690-21481690 FN-124 Single Base Substitution A-C INTRON HET SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN824-S.SNP.10:21482060 chr10:021482060 0 W/21482060-21482060 FN824-S Single Base Substitution G-A INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN-223.SNP.10:21486934 chr10:021486934 0 W/21486934-21486934 FN-223 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN-306.SNP.10:21486934 chr10:021486934 0 W/21486934-21486934 FN-306 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN1075-S.SNP.10:21486934 chr10:021486934 0 W/21486934-21486934 FN1075-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN589-S.SNP.10:21486934 chr10:021486934 0 W/21486934-21486934 FN589-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN544-S.SNP.10:21493676 chr10:021493676 0 W/21493676-21493676 FN544-S Single Base Substitution C-G INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2719-S.SNP.10:21500310 chr10:021500310 0 W/21500310-21500310 FN2719-S SNP C -> A AC=1;AN=200;BQB=0.492182;DP=7727;DP4=3985,3361,8,12;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.10651;MQB=0.498333;MQSB=2.33717e-22;RPB=0.946613;SGB=37.3004;VDB=0.51241;EFF=STOP_LOST(HIGH|MISSENSE|tGa/tTa|*832L|831|LOC_Os10g40160|protein_coding|CODING|LOC_Os10g40160.1|7|1) FN-400.SNP.10:21511777 chr10:021511777 0 W/21511777-21511777 FN-400 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.10:21511777 chr10:021511777 0 W/21511777-21511777 FN400-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN-400.SNP.10:21511778 chr10:021511778 0 W/21511778-21511778 FN-400 Single Base Substitution A-T STOP_GAINED HOMO LOC_Os10g40180 retrotransposon protein, putative, unclassified, expressed SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.10:21511778 chr10:021511778 0 W/21511778-21511778 FN400-S Single Base Substitution A-T STOP_GAINED HET LOC_Os10g40180 retrotransposon protein, putative, unclassified, expressed SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN3935-S.SNP.10:21514318 chr10:021514318 0 W/21514318-21514318 FN3935-S SNP C -> T AC=1;AN=158;BQB=0.915226;DP=2631;DP4=1194,1351,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00152033;MQB=4.37901e-06;MQSB=0.262298;RPB=0.999695;SGB=38.3284;VDB=0.800627;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A599|742|LOC_Os10g40190|protein_coding|CODING|LOC_Os10g40190.1|7|1) FN2781-S.SNP.10:21518305 chr10:021518305 0 W/21518305-21518305 FN2781-S SNP G -> C AC=1;AN=198;BQB=0.164553;DP=4329;DP4=2034,2029,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.80107e-09;MQSB=0.834994;RPB=0.40319;SGB=21.559;VDB=0.189211;EFF=INTERGENIC(MODIFIER||||||||||1) FN2535-S.SNP.10:21529600 chr10:021529600 0 W/21529600-21529600 FN2535-S SNP T -> C AC=1;AN=198;BQB=0.908491;DP=4444;DP4=1554,2613,5,10;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0558056;MQB=0.568997;MQSB=0.159762;RPB=0.148956;SGB=63.3342;VDB=0.0790378;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.10:21536790 chr10:021536790 0 W/21536790-21536790 FN3934-S SNP C -> T AC=1;AN=158;BQB=0.997155;DP=3014;DP4=1520,1380,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.7215e-10;MQSB=0.507192;RPB=0.969018;SGB=50.9207;VDB=0.0591071;EFF=INTRON(MODIFIER||||598|LOC_Os10g40220|protein_coding|CODING|LOC_Os10g40220.1|6|1) FN-283.SNP.10:21551806 chr10:021551806 0 W/21551806-21551806 FN-283 Single Base Substitution G-T INTERGENIC HOMO SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN-41.SNP.10:21561864 chr10:021561864 0 W/21561864-21561864 FN-41 Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os10g40250 expressed protein SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN-41.SNP.10:21561865 chr10:021561865 0 W/21561865-21561865 FN-41 Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os10g40250 expressed protein SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN2233-S.SNP.10:21564850 chr10:021564850 0 W/21564850-21564850 FN2233-S SNP A -> G AC=1;AN=190;BQB=0.953889;DP=4598;DP4=2116,2152,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.7121e-09;MQSB=0.424168;RPB=0.807773;SGB=39.6545;VDB=0.835306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.10:21566349 chr10:021566349 0 W/21566349-21566349 FN1163-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN838-S.SNP.10:21566438 chr10:021566438 0 W/21566438-21566438 FN838-S Single Base Substitution C-T INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. W453-3-1.SNP.10:21584270 chr10:021584270 0 W/21584270-21584270 W453-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN4253-S.SNP.10:21593295 chr10:021593295 0 W/21593295-21593295 FN4253-S SNP G -> C AC=1;AN=170;BQB=0.674983;DP=2423;DP4=1312,1034,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.47788e-06;MQSB=0.869727;RPB=0.999362;SGB=41.7633;VDB=0.645276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tCc|C182S|390|LOC_Os10g40280|protein_coding|CODING|LOC_Os10g40280.1|1|1) FN1423-S.SNP.10:21595770 chr10:021595770 0 W/21595770-21595770 FN1423-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g40290 pectinacetylesterase domain containing protein, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3711-S.SNP.10:21600961 chr10:021600961 0 W/21600961-21600961 FN3711-S SNP C -> T AC=1;AN=190;BQB=0.995317;DP=2454;DP4=1264,1090,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50133e-10;MQSB=0.0299769;RPB=0.668739;SGB=71.8647;VDB=0.782144;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.10:21601025 chr10:021601025 0 W/21601025-21601025 W423-5-1 Single Base Substitution G-A INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. W138-2-1.SNP.10:21611568 chr10:021611568 0 W/21611568-21611568 W138-2-1 Single Base Substitution A-G INTRON HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3810-S.SNP.10:21614262 chr10:021614262 0 W/21614262-21614262 FN3810-S SNP G -> A AC=2;AN=190;BQB=0.998283;DP=2863;DP4=1493,1261,7,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.86675e-09;MQSB=0.787225;RPB=0.887764;SGB=67.3108;VDB=0.161694;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.10:21616663 chr10:021616663 0 W/21616663-21616663 FN4137-S SNP G -> T AC=1;AN=170;BQB=0.999979;DP=2766;DP4=1171,1515,3,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.72908e-10;MQSB=0.919524;RPB=0.474942;SGB=61.2001;VDB=0.0840807;EFF=INTERGENIC(MODIFIER||||||||||1) FN4137-S.SNP.10:21616664 chr10:021616664 0 W/21616664-21616664 FN4137-S SNP C -> T AC=1;AN=170;BQB=0.895207;DP=2768;DP4=1156,1502,3,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.41097e-10;MQSB=0.959772;RPB=0.507712;SGB=61.2001;VDB=0.0776399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.10:21617304 chr10:021617304 0 W/21617304-21617304 FN2353 SNP C -> T AC=1;AN=192;BQB=0.964631;DP=4816;DP4=2259,2295,8,2;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.5139e-06;MQSB=0.879306;RPB=0.890454;SGB=25.5227;VDB=0.343674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.10:21646899 chr10:021646899 0 W/21646899-21646899 FN2436 SNP A -> G AC=1;AN=200;BQB=0.964055;DP=4744;DP4=2193,2104,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66775e-09;MQSB=0.936038;RPB=0.922513;SGB=15.9106;VDB=0.52706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V829A|1477|LOC_Os10g40400|protein_coding|CODING|LOC_Os10g40400.1|1|1) FN1490-S.SNP.10:21650102 chr10:021650102 0 W/21650102-21650102 FN1490-S Single Base Substitution A-C INTERGENIC Homo SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2500.SNP.10:21650102 chr10:021650102 0 W/21650102-21650102 FN2500 SNP A -> C AC=2;AN=200;BQB=0.987194;DP=4609;DP4=2526,1650,30,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.57887e-23;MQSB=0.888088;RPB=0.102647;SGB=52.8295;VDB=0.3873;EFF=INTERGENIC(MODIFIER||||||||||1) FN3669-S.SNP.10:21650102 chr10:021650102 0 W/21650102-21650102 FN3669-S SNP A -> C AC=1;AN=190;BQB=0.244878;DP=3004;DP4=1675,1128,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60568e-06;MQSB=0.970808;RPB=0.950541;SGB=23.6597;VDB=0.827881;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.10:21661501 chr10:021661501 0 W/21661501-21661501 FN3714-S SNP T -> A AC=1;AN=190;BQB=0.998927;DP=2648;DP4=1353,1228,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.07786e-12;MQSB=0.963841;RPB=0.97636;SGB=76.4186;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.10:21661502 chr10:021661502 0 W/21661502-21661502 FN3714-S SNP C -> T AC=1;AN=190;BQB=0.878623;DP=2651;DP4=1352,1222,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.84586e-11;MQSB=0.951301;RPB=0.913722;SGB=71.8647;VDB=0.459649;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.10:21661503 chr10:021661503 0 W/21661503-21661503 FN3714-S SNP A -> T AC=1;AN=190;BQB=0.990486;DP=2658;DP4=1351,1217,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44075e-12;MQSB=0.976144;RPB=0.999342;SGB=76.4186;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.10:21670130 chr10:021670130 0 W/21670130-21670130 FN2214-S SNP C -> T AC=1;AN=190;BQB=0.882953;DP=5185;DP4=2269,2583,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.07383e-09;MQSB=0.746885;RPB=0.999252;SGB=39.6545;VDB=0.914477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2141-S.SNP.10:21675972 chr10:021675972 0 W/21675972-21675972 FN2141-S SNP G -> A AC=1;AN=168;BQB=0.390539;DP=2337;DP4=1191,1077,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000676466;MQSB=0.994293;RPB=0.748314;SGB=-17.9574;VDB=0.622197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.10:21678185 chr10:021678185 0 W/21678185-21678185 FN2138-S SNP T -> A AC=1;AN=168;BQB=9.87633e-30;DP=3445;DP4=1854,1296,11,83;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000406775;MQSB=0.0569809;RPB=0.000107835;SGB=-2143.68;VDB=0.000997649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.10:21678186 chr10:021678186 0 W/21678186-21678186 FN2138-S SNP A -> T AC=1;AN=168;BQB=0.000157194;DP=3416;DP4=1830,1423,17,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00504503;MQSB=0.0318265;RPB=0.763127;SGB=-344.882;VDB=0.128613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.10:21678536 chr10:021678536 0 W/21678536-21678536 FN2370 SNP C -> T AC=2;AN=192;BQB=0.889568;DP=5140;DP4=2076,2741,18,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.55729e-19;MQSB=0.995236;RPB=0.988762;SGB=41.7705;VDB=0.89303;EFF=INTERGENIC(MODIFIER||||||||||1) FN1057-S.SNP.10:21678863 chr10:021678863 0 W/21678863-21678863 FN1057-S Single Base Substitution G-C INTERGENIC HET SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1224-S.SNP.10:21684987 chr10:021684987 0 W/21684987-21684987 FN1224-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3673-S.SNP.10:21685574 chr10:021685574 0 W/21685574-21685574 FN3673-S SNP C -> G AC=2;AN=190;BQB=0.895337;DP=1731;DP4=615,1010,7,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.02175e-06;MQSB=0.551914;RPB=0.571265;SGB=62.7569;VDB=0.0389776;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.10:21689316 chr10:021689316 0 W/21689316-21689316 FN1279-S Single Base Substitution C-T INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3990-S.SNP.10:21690542 chr10:021690542 0 W/21690542-21690542 FN3990-S SNP A -> G AC=1;AN=168;BQB=0.998048;DP=2655;DP4=1205,1264,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.73098e-09;MQSB=0.335689;RPB=0.897256;SGB=78.7577;VDB=0.861032;EFF=UTR_3_PRIME(MODIFIER||58||133|LOC_Os10g40510|protein_coding|CODING|LOC_Os10g40510.1|1|1) FN445-S.SNP.10:21693956 chr10:021693956 0 W/21693956-21693956 FN445-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-226.SNP.10:21701078 chr10:021701078 0 W/21701078-21701078 FN-226 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g40540 enoyl-CoA hydratase/isomerase family protein, putative, expressed SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1535-S.SNP.10:21726403 chr10:021726403 0 W/21726403-21726403 FN1535-S Single Base Substitution A-G INTRON Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN2217-S.SNP.10:21726403 chr10:021726403 0 W/21726403-21726403 FN2217-S SNP A -> G AC=2;AN=190;BQB=0.819121;DP=4495;DP4=1788,2336,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000222469;MQB=1.55184e-19;MQSB=0.696262;RPB=0.816738;SGB=114.286;VDB=0.381931;EFF=INTRON(MODIFIER||||482|LOC_Os10g40570|protein_coding|CODING|LOC_Os10g40570.1|1|1) FN867-S.SNP.10:21726896 chr10:021726896 0 W/21726896-21726896 FN867-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os10g40570 flavin-containing monooxygenase family protein, putative, expressed SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN3855-S.SNP.10:21732320 chr10:021732320 0 W/21732320-21732320 FN3855-S SNP C -> T AC=2;AN=158;BQB=0.725904;DP=2481;DP4=1290,1076,20,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.89894e-19;MQSB=0.873204;RPB=0.835291;SGB=114.94;VDB=0.964221;EFF=INTRON(MODIFIER||||590|LOC_Os10g40580|protein_coding|CODING|LOC_Os10g40580.1|2|1) FN2539-S.SNP.10:21737322 chr10:021737322 0 W/21737322-21737322 FN2539-S SNP A -> G AC=1;AN=198;BQB=0.993158;DP=4498;DP4=2074,2226,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.35367e-12;MQSB=0.953084;RPB=0.849904;SGB=58.1246;VDB=0.444751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:21737326 chr10:021737326 0 W/21737326-21737326 FN2249-S SNP G -> A AC=1;AN=190;BQB=0.767505;DP=5080;DP4=2353,2447,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.76715e-11;MQSB=0.896416;RPB=0.233972;SGB=10.3266;VDB=0.0486214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:21737329 chr10:021737329 0 W/21737329-21737329 FN2249-S SNP A -> T AC=1;AN=190;BQB=0.999915;DP=5110;DP4=2356,2359,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99437e-11;MQSB=0.894584;RPB=0.627091;SGB=50.3161;VDB=0.109184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:21737330 chr10:021737330 0 W/21737330-21737330 FN2249-S SNP G -> T AC=1;AN=190;BQB=0.738303;DP=5120;DP4=2377,2444,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.62863e-13;MQSB=0.976926;RPB=0.620129;SGB=-11.5603;VDB=0.144949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:21737587 chr10:021737587 0 W/21737587-21737587 FN2249-S SNP C -> T AC=1;AN=190;BQB=0.96256;DP=4866;DP4=2388,2194,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10898e-11;MQSB=0.989876;RPB=0.666557;SGB=76.4186;VDB=0.789681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.10:21737588 chr10:021737588 0 W/21737588-21737588 FN2249-S SNP A -> T AC=1;AN=190;BQB=0.627491;DP=4882;DP4=2315,2188,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.73193e-12;MQSB=0.99442;RPB=0.843823;SGB=13.4344;VDB=0.522923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.10:21738825 chr10:021738825 0 W/21738825-21738825 FN1028-S Single Base Substitution C-T INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN3957-S.SNP.10:21744131 chr10:021744131 0 W/21744131-21744131 FN3957-S SNP A -> T AC=2;AN=168;BQB=0.725721;DP=2414;DP4=1188,1103,14,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.94789e-14;MQSB=0.741351;RPB=0.867637;SGB=69.0561;VDB=0.275848;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.10:21756264 chr10:021756264 0 W/21756264-21756264 FN_822-5-1 Single Base Substitution G-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2444.SNP.10:21760714 chr10:021760714 0 W/21760714-21760714 FN2444 SNP C -> T AC=2;AN=200;BQB=0.899263;DP=4441;DP4=2035,2135,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.51099e-23;MQSB=0.90793;RPB=0.98282;SGB=3.83453;VDB=0.464495;EFF=INTRON(MODIFIER||||596|LOC_Os10g40600|protein_coding|CODING|LOC_Os10g40600.1|1|1) FN4040-S.SNP.10:21767175 chr10:021767175 0 W/21767175-21767175 FN4040-S SNP C -> G AC=2;AN=168;BQB=0.968215;DP=2518;DP4=1157,1265,13,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.80217e-17;MQSB=0.974702;RPB=0.997142;SGB=103.364;VDB=0.932484;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.10:21769224 chr10:021769224 0 W/21769224-21769224 FN3437-S SNP A -> T AC=1;AN=184;BQB=0.997958;DP=2498;DP4=1075,1361,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2787e-05;MQSB=0.866545;RPB=0.901681;SGB=25.1826;VDB=0.294276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.10:21773660 chr10:021773660 0 W/21773660-21773660 FN3773-S SNP A -> G AC=2;AN=190;BQB=0.626428;DP=2631;DP4=1348,1182,10,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.33102e-12;MQSB=0.505913;RPB=0.10784;SGB=78.7471;VDB=0.329521;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.10:21779986 chr10:021779986 0 W/21779986-21779986 FN1281-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2455.SNP.10:21784437 chr10:021784437 0 W/21784437-21784437 FN2455 SNP A -> T AC=2;AN=200;BQB=0.625621;DP=4910;DP4=2486,2120,36,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.76889e-32;MQSB=0.355845;RPB=0.845098;SGB=136.297;VDB=0.283103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.10:21786126 chr10:021786126 0 W/21786126-21786126 FN2498 SNP A -> G AC=1;AN=200;BQB=0.978427;DP=4864;DP4=2445,2102,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60096e-11;MQSB=0.983268;RPB=0.311609;SGB=54.6902;VDB=0.48287;EFF=UTR_5_PRIME(MODIFIER||85||167|LOC_Os10g40614|protein_coding|CODING|LOC_Os10g40614.1|1|1) FN2467.SNP.10:21790708 chr10:021790708 0 W/21790708-21790708 FN2467 SNP C -> A AC=2;AN=200;BQB=0.98505;DP=4787;DP4=2409,1841,15,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.13518e-18;MQSB=0.736511;RPB=0.994084;SGB=-184.987;VDB=0.173198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.10:21794525 chr10:021794525 0 W/21794525-21794525 FN2296 SNP C -> T AC=1;AN=192;BQB=0.822922;DP=4875;DP4=2183,2462,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.48859e-14;MQSB=0.859406;RPB=0.936114;SGB=78.9878;VDB=0.942575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3669-S.SNP.10:21794593 chr10:021794593 0 W/21794593-21794593 FN3669-S SNP T -> C AC=1;AN=190;BQB=0.876997;DP=2986;DP4=1301,1552,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.06846e-08;MQSB=0.853152;RPB=0.970239;SGB=21.1058;VDB=0.62439;EFF=INTERGENIC(MODIFIER||||||||||1) FN502-S.SNP.10:21795602 chr10:021795602 0 W/21795602-21795602 FN502-S Single Base Substitution C-T INTERGENIC HOMO SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN4183-S.SNP.10:21795813 chr10:021795813 0 W/21795813-21795813 FN4183-S SNP C -> T AC=1;AN=170;BQB=0.967099;DP=2749;DP4=1334,1325,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000363769;MQB=1.85076e-07;MQSB=0.84458;RPB=0.961604;SGB=43.4296;VDB=0.297961;EFF=INTERGENIC(MODIFIER||||||||||1) FN761-S.SNP.10:21807088 chr10:021807088 0 W/21807088-21807088 FN761-S Single Base Substitution T-C INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2322.SNP.10:21809515 chr10:021809515 0 W/21809515-21809515 FN2322 SNP T -> A AC=2;AN=192;BQB=0.507454;DP=4772;DP4=2186,2192,20,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.54839e-19;MQSB=0.374586;RPB=0.948148;SGB=80.2009;VDB=0.866845;EFF=UTR_3_PRIME(MODIFIER||56||359|LOC_Os10g40660|protein_coding|CODING|LOC_Os10g40660.1|1|1) FN2637-S.SNP.10:21812253 chr10:021812253 0 W/21812253-21812253 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.915707;DP=5021;DP4=2404,2362,6,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46943e-13;MQSB=0.975307;RPB=0.0448292;SGB=39.9056;VDB=0.00182362;EFF=INTERGENIC(MODIFIER||||||||||1) FN689-S.SNP.10:21815530 chr10:021815530 0 W/21815530-21815530 FN689-S Single Base Substitution A-C INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1170-S.SNP.10:21816941 chr10:021816941 0 W/21816941-21816941 FN1170-S Single Base Substitution G-A INTERGENIC HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3983-S.SNP.10:21816941 chr10:021816941 0 W/21816941-21816941 FN3983-S SNP G -> A AC=2;AN=168;BQB=0.794196;DP=1431;DP4=728,635,7,6;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.80516e-05;MQSB=0.00102819;RPB=0.971973;SGB=52.1728;VDB=0.476568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4093-S.SNP.10:21816941 chr10:021816941 0 W/21816941-21816941 FN4093-S SNP G -> A AC=2;AN=182;BQB=0.998607;DP=1838;DP4=894,856,10,10;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=6.09544e-10;MQSB=9.14554e-08;RPB=0.84339;SGB=35.6984;VDB=0.00586559;EFF=INTERGENIC(MODIFIER||||||||||1) FN4175-S.SNP.10:21816941 chr10:021816941 0 W/21816941-21816941 FN4175-S SNP G -> A AC=2;AN=170;BQB=0.983524;DP=1542;DP4=748,721,10,5;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.000648508;MQB=1.55181e-06;MQSB=6.0751e-05;RPB=0.970945;SGB=41.7633;VDB=0.00515589;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.10:21816941 chr10:021816941 0 W/21816941-21816941 FN429-S Single Base Substitution G-A INTERGENIC HOMO SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3916-S.SNP.10:21820242 chr10:021820242 0 W/21820242-21820242 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.954771;DP=2650;DP4=1210,1300,13,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.72595e-11;MQSB=0.950801;RPB=0.92084;SGB=57.6596;VDB=0.348672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.10:21822029 chr10:021822029 0 W/21822029-21822029 FN3294-S SNP T -> G AC=1;AN=184;BQB=0.985117;DP=3170;DP4=1649,1404,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84438e-05;MQSB=0.916094;RPB=0.053362;SGB=39.699;VDB=0.0453183;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.10:21829515 chr10:021829515 0 W/21829515-21829515 FN2364 SNP C -> G AC=1;AN=192;BQB=0.377213;DP=4826;DP4=2311,2170,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.95996e-06;MQSB=0.95393;RPB=0.871449;SGB=7.3548;VDB=0.658469;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.10:21831391 chr10:021831391 0 W/21831391-21831391 FN1481-S Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os10g40700 expansin precursor, putative, expressed SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN-222.SNP.10:21834744 chr10:021834744 0 W/21834744-21834744 FN-222 Single Base Substitution T-C INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN922-S.SNP.10:21837285 chr10:021837285 0 W/21837285-21837285 FN922-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os10g40710 expansin precursor, putative, expressed SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1254-S.SNP.10:21837291 chr10:021837291 0 W/21837291-21837291 FN1254-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g40710 expansin precursor, putative, expressed SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN505-S.SNP.10:21838019 chr10:021838019 0 W/21838019-21838019 FN505-S Single Base Substitution C-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.10:21838020 chr10:021838020 0 W/21838020-21838020 FN505-S Single Base Substitution G-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN505-S.SNP.10:21838023 chr10:021838023 0 W/21838023-21838023 FN505-S Single Base Substitution G-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2580-S.SNP.10:21843174 chr10:021843174 0 W/21843174-21843174 FN2580-S SNP G -> C AC=2;AN=198;BQB=0.987044;DP=4064;DP4=2206,1618,29,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.289e-27;MQSB=0.658884;RPB=0.89621;SGB=169.573;VDB=0.99249;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.10:21843523 chr10:021843523 0 W/21843523-21843523 FN-155 Single Base Substitution C-A INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN482-S.SNP.10:21843999 chr10:021843999 0 W/21843999-21843999 FN482-S Single Base Substitution C-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN4204-S.SNP.10:21845114 chr10:021845114 0 W/21845114-21845114 FN4204-S SNP C -> G AC=1;AN=170;BQB=0.955262;DP=3323;DP4=1931,1304,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.48438e-07;MQSB=0.992906;RPB=0.65077;SGB=38.987;VDB=0.273746;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.10:21847518 chr10:021847518 0 W/21847518-21847518 FN864-S Single Base Substitution G-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN4024-S.SNP.10:21851857 chr10:021851857 0 W/21851857-21851857 FN4024-S SNP G -> A AC=1;AN=168;BQB=0.944114;DP=2877;DP4=1329,1426,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.68985e-07;MQSB=0.99309;RPB=0.912166;SGB=43.3113;VDB=0.477182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.10:21852885 chr10:021852885 0 W/21852885-21852885 FN3857-S SNP A -> G AC=1;AN=158;BQB=0.904735;DP=2884;DP4=1107,1656,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.11922e-10;MQSB=0.992674;RPB=0.258512;SGB=64.5449;VDB=0.212649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2308.SNP.10:21860273 chr10:021860273 0 W/21860273-21860273 FN2308 SNP T -> A AC=1;AN=192;BQB=0.439524;DP=4603;DP4=2250,2063,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.66942e-09;MQSB=0.999306;RPB=0.905965;SGB=43.3444;VDB=0.39638;EFF=INTRON(MODIFIER||||286|LOC_Os10g40730|protein_coding|CODING|LOC_Os10g40730.1|3|1) FN852-S.SNP.10:21862843 chr10:021862843 0 W/21862843-21862843 FN852-S Single Base Substitution T-C INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2286.SNP.10:21864661 chr10:021864661 0 W/21864661-21864661 FN2286 SNP A -> C AC=2;AN=192;BQB=0.998007;DP=5221;DP4=2699,2079,26,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.23459e-25;MQSB=0.749022;RPB=0.865714;SGB=60.5426;VDB=0.558361;EFF=INTRON(MODIFIER||||465|LOC_Os10g40740|protein_coding|CODING|LOC_Os10g40740.1|2|1) FN3449-S.SNP.10:21868379 chr10:021868379 0 W/21868379-21868379 FN3449-S SNP T -> A AC=2;AN=184;BQB=0.661944;DP=3158;DP4=1593,1405,19,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.3152e-16;MQSB=0.800535;RPB=0.92856;SGB=116.569;VDB=0.53678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2213-S.SNP.10:21875696 chr10:021875696 0 W/21875696-21875696 FN2213-S SNP T -> A AC=1;AN=190;BQB=0.144535;DP=4978;DP4=2290,2329,10,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7622e-14;MQSB=0.775103;RPB=0.264834;SGB=54.3062;VDB=0.331546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.10:21881093 chr10:021881093 0 W/21881093-21881093 FN2096-S SNP T -> G AC=1;AN=156;BQB=0.676539;DP=466;DP4=125,268,4,9;HOB=8.21828e-05;ICB=0.000165419;MQ=43;MQ0F=0.0193133;MQB=0.143674;MQSB=0.00306025;RPB=0.996571;SGB=7.46024;VDB=0.56105;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.10:21883447 chr10:021883447 0 W/21883447-21883447 FN505-S Single Base Substitution C-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN_552-1-1.SNP.10:21888390 chr10:021888390 0 W/21888390-21888390 FN_552-1-1 Single Base Substitution G-A HET LOC_Os10g40780 CCR4-Not complex component, Not1domain containing protein, expressed SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1099-S.SNP.10:21896070 chr10:021896070 0 W/21896070-21896070 FN1099-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN791-S.SNP.10:21903614 chr10:021903614 0 W/21903614-21903614 FN791-S Single Base Substitution G-T INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN1230-S.SNP.10:21923160 chr10:021923160 0 W/21923160-21923160 FN1230-S Single Base Substitution A-T INTERGENIC HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1003-S.SNP.10:21925882 chr10:021925882 0 W/21925882-21925882 FN1003-S Single Base Substitution T-A INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1237-S.SNP.10:21934193 chr10:021934193 0 W/21934193-21934193 FN1237-S Single Base Substitution C-T INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN1071-S.SNP.10:21942248 chr10:021942248 0 W/21942248-21942248 FN1071-S Single Base Substitution G-A INTERGENIC HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN1461-S.SNP.10:21959985 chr10:021959985 0 W/21959985-21959985 FN1461-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN2219-S.SNP.10:21961886 chr10:021961886 0 W/21961886-21961886 FN2219-S SNP C -> T AC=1;AN=190;BQB=0.260508;DP=4577;DP4=2096,2099,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.63273e-11;MQSB=0.99449;RPB=0.917137;SGB=16.5421;VDB=0.501613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.10:21978919 chr10:021978919 0 W/21978919-21978919 FN1465-S Single Base Substitution C-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN527-S.SNP.10:21980787 chr10:021980787 0 W/21980787-21980787 FN527-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN1734-S.SNP.10:21982380 chr10:021982380 0 W/21982380-21982380 FN1734-S SNP C -> G AC=1;AN=188;BQB=0.589487;DP=1675;DP4=807,841,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00119403;MQB=0.999977;MQSB=0.648742;RPB=0.324552;SGB=-14.9998;VDB=0.0514699;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.10:21988810 chr10:021988810 0 W/21988810-21988810 FN544-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN836-S.SNP.10:21998912 chr10:021998912 0 W/21998912-21998912 FN836-S Single Base Substitution T-A INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN628-S.SNP.10:21999716 chr10:021999716 0 W/21999716-21999716 FN628-S Single Base Substitution G-A INTERGENIC HET SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1389-S.SNP.10:22005794 chr10:022005794 0 W/22005794-22005794 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1681-S.SNP.10:22014883 chr10:022014883 0 W/22014883-22014883 FN1681-S SNP C -> A AC=2;AN=188;BQB=0.883927;DP=4104;DP4=1829,2212,19,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.50231e-21;MQSB=0.908035;RPB=0.985766;SGB=1.29908;VDB=0.00853434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.10:22022262 chr10:022022262 0 W/22022262-22022262 FN3549-S SNP T -> C AC=1;AN=188;BQB=0.981464;DP=2794;DP4=1472,1236,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.95472e-06;MQSB=0.983783;RPB=0.212767;SGB=21.8113;VDB=0.300288;EFF=INTRON(MODIFIER||||360|LOC_Os10g41020|protein_coding|CODING|LOC_Os10g41020.1|2|1) FN902-S.SNP.10:22038203 chr10:022038203 0 W/22038203-22038203 FN902-S Single Base Substitution G-A INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. W450-6-1.SNP.10:22050480 chr10:022050480 0 W/22050480-22050480 W450-6-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2725-S.SNP.10:22054887 chr10:022054887 0 W/22054887-22054887 FN2725-S SNP G -> T AC=2;AN=200;BQB=0.999518;DP=4928;DP4=2307,2364,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.56172e-19;MQSB=0.970263;RPB=0.721716;SGB=101.557;VDB=0.224174;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.10:22066081 chr10:022066081 0 W/22066081-22066081 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.328512;DP=2166;DP4=1070,1045,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000516152;MQSB=0.997561;RPB=0.839915;SGB=-2.96336;VDB=0.208712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.10:22068633 chr10:022068633 0 W/22068633-22068633 FN2582-S SNP T -> C AC=1;AN=198;BQB=0.913665;DP=4189;DP4=1908,2078,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.034137;MQB=0.00495255;MQSB=1.82143e-14;RPB=0.678411;SGB=26.5745;VDB=0.347872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.10:22071567 chr10:022071567 0 W/22071567-22071567 FN2577-S SNP G -> A AC=1;AN=198;BQB=0.887463;DP=4123;DP4=1775,2122,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.79488e-07;MQSB=0.957279;RPB=0.756145;SGB=13.7737;VDB=0.357216;EFF=INTRON(MODIFIER||||297|LOC_Os10g41100|protein_coding|CODING|LOC_Os10g41100.1|1|1) FN-73.SNP.10:22072854 chr10:022072854 0 W/22072854-22072854 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN2637-S.SNP.10:22074950 chr10:022074950 0 W/22074950-22074950 FN2637-S SNP T -> G AC=2;AN=200;BQB=0.246753;DP=4891;DP4=2753,1850,30,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000204457;MQB=1.23262e-27;MQSB=0.999431;RPB=0.819151;SGB=220.051;VDB=0.837062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.10:22078664 chr10:022078664 0 W/22078664-22078664 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.994156;DP=5209;DP4=2608,2341,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7319e-10;MQSB=0.998105;RPB=0.782932;SGB=32.0901;VDB=0.892215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.10:22085297 chr10:022085297 0 W/22085297-22085297 FN2536-S SNP G -> T AC=1;AN=198;BQB=0.999378;DP=4387;DP4=2077,2047,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.89866e-10;MQSB=0.977358;RPB=0.383956;SGB=43.7442;VDB=0.836865;EFF=INTRON(MODIFIER||||594|LOC_Os10g41120|protein_coding|CODING|LOC_Os10g41120.1|1|1) FN3831-S.SNP.10:22090787 chr10:022090787 0 W/22090787-22090787 FN3831-S SNP T -> A AC=1;AN=190;BQB=0.904793;DP=2568;DP4=1237,1235,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.95278e-07;MQSB=0.979065;RPB=0.442901;SGB=39.6545;VDB=0.140339;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.10:22093407 chr10:022093407 0 W/22093407-22093407 FN-211 Single Base Substitution C-T INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-211.SNP.10:22093408 chr10:022093408 0 W/22093408-22093408 FN-211 Single Base Substitution T-G INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1725-S.SNP.10:22109199 chr10:022109199 0 W/22109199-22109199 FN1725-S SNP A -> T AC=1;AN=188;BQB=0.695905;DP=3760;DP4=1931,1802,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.94916e-11;MQSB=0.796368;RPB=0.978563;SGB=33.7061;VDB=0.395807;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.10:22118239 chr10:022118239 0 W/22118239-22118239 FN2091-S SNP G -> T AC=1;AN=168;BQB=0.0115498;DP=4504;DP4=2216,2225,20,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.8982e-11;MQSB=0.87577;RPB=0.601453;SGB=-462.86;VDB=0.18143;EFF=INTRON(MODIFIER||||331|LOC_Os10g41170|protein_coding|CODING|LOC_Os10g41170.1|2|1) FN691-S.SNP.10:22118599 chr10:022118599 0 W/22118599-22118599 FN691-S Single Base Substitution T-A INTRON HET SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN-294.SNP.10:22120816 chr10:022120816 0 W/22120816-22120816 FN-294 Single Base Substitution G-A INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN-294.SNP.10:22120817 chr10:022120817 0 W/22120817-22120817 FN-294 Single Base Substitution T-A INTERGENIC HET SNo: 290, Mutant_ID: FN-294, Generation: M2, Mutations: 60, Genes: 30, Seed availability: Yes. FN2723-S.SNP.10:22149372 chr10:022149372 0 W/22149372-22149372 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.493346;DP=5163;DP4=2557,2367,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85544e-10;MQSB=0.883566;RPB=0.383777;SGB=47.4799;VDB=0.118992;EFF=INTERGENIC(MODIFIER||||||||||1) FN976-S.SNP.10:22150169 chr10:022150169 0 W/22150169-22150169 FN976-S Single Base Substitution A-T INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN976-S.SNP.10:22150170 chr10:022150170 0 W/22150170-22150170 FN976-S Single Base Substitution G-T INTERGENIC HET SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN544-S.SNP.10:22162845 chr10:022162845 0 W/22162845-22162845 FN544-S Single Base Substitution A-C INTRON HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN3563-S.SNP.10:22165739 chr10:022165739 0 W/22165739-22165739 FN3563-S SNP T -> C AC=1;AN=188;BQB=0.886261;DP=2515;DP4=1190,1227,13,17;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09873e-17;MQSB=0.98625;RPB=0.826808;SGB=27.1443;VDB=0.636418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3869-S.SNP.10:22169754 chr10:022169754 0 W/22169754-22169754 FN3869-S SNP A -> G AC=1;AN=158;BQB=0.37682;DP=2842;DP4=1107,1577,6,14;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.30333e-09;MQSB=0.29533;RPB=0.522759;SGB=8.93339;VDB=0.555673;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.10:22172091 chr10:022172091 0 W/22172091-22172091 FN-285 Single Base Substitution G-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-66.SNP.10:22178807 chr10:022178807 0 W/22178807-22178807 FN-66 Single Base Substitution A-G INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1154-S.SNP.10:22178987 chr10:022178987 0 W/22178987-22178987 FN1154-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN1154-S.SNP.10:22178997 chr10:022178997 0 W/22178997-22178997 FN1154-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN505-S.SNP.10:22194451 chr10:022194451 0 W/22194451-22194451 FN505-S Single Base Substitution A-T UTR_5_PRIME HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2395.SNP.10:22208980 chr10:022208980 0 W/22208980-22208980 FN2395 SNP G -> A AC=1;AN=200;BQB=0.278895;DP=5013;DP4=2397,2249,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.97826e-13;MQSB=0.775714;RPB=0.264791;SGB=52.9314;VDB=0.556139;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.10:22210022 chr10:022210022 0 W/22210022-22210022 FN2347 SNP T -> A AC=1;AN=192;BQB=0.668828;DP=3962;DP4=1300,2372,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000252398;MQB=5.60053e-11;MQSB=0.976657;RPB=0.997772;SGB=46.8644;VDB=0.15139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.10:22213519 chr10:022213519 0 W/22213519-22213519 FN3743-S SNP G -> C AC=1;AN=190;BQB=0.997696;DP=2008;DP4=961,955,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.50422e-06;MQSB=0.834989;RPB=0.980096;SGB=28.9929;VDB=0.5837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E104D|273|LOC_Os10g41330|protein_coding|CODING|LOC_Os10g41330.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E104D|246|LOC_Os10g41330|protein_coding|CODING|LOC_Os10g41330.2|1|1) FN-315.SNP.10:22213960 chr10:022213960 0 W/22213960-22213960 FN-315 Single Base Substitution C-T INTRON HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1330-S.SNP.10:22224807 chr10:022224807 0 W/22224807-22224807 FN1330-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g41350 transposon protein, putative, Pong sub-class, expressed SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2122-S.SNP.10:22225039 chr10:022225039 0 W/22225039-22225039 FN2122-S SNP T -> C AC=1;AN=168;BQB=0.432092;DP=3199;DP4=1540,1620,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=2.84038e-06;MQSB=4.83497e-10;RPB=0.883379;SGB=92.0501;VDB=0.307501;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T116|513|LOC_Os10g41350|protein_coding|CODING|LOC_Os10g41350.1|1|1) FN876-S.SNP.10:22239435 chr10:022239435 0 W/22239435-22239435 FN876-S Single Base Substitution C-T STOP_GAINED HET LOC_Os10g41370 WD repeat-containing protein 8, putative, expressed SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3628-S.SNP.10:22247676 chr10:022247676 0 W/22247676-22247676 FN3628-S SNP G -> C AC=1;AN=190;BQB=0.975611;DP=2406;DP4=1020,1129,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2838e-06;MQSB=0.640887;RPB=0.923259;SGB=13.4442;VDB=0.625368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.10:22249170 chr10:022249170 0 W/22249170-22249170 FN3868-S SNP G -> A AC=2;AN=158;BQB=0.905234;DP=2437;DP4=1232,1129,5,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.52671e-05;MQSB=0.904384;RPB=0.468441;SGB=23.9652;VDB=0.947685;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M193I|999|LOC_Os10g41390|protein_coding|CODING|LOC_Os10g41390.1|3|1) FN3293-S.SNP.10:22252793 chr10:022252793 0 W/22252793-22252793 FN3293-S SNP C -> A AC=2;AN=184;BQB=0.991656;DP=2934;DP4=1506,1322,16,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.54892e-16;MQSB=0.876507;RPB=0.546007;SGB=95.6183;VDB=0.797702;EFF=INTRON(MODIFIER||||999|LOC_Os10g41390|protein_coding|CODING|LOC_Os10g41390.1|14|1) FN3453-S.SNP.10:22254145 chr10:022254145 0 W/22254145-22254145 FN3453-S SNP T -> C AC=1;AN=184;BQB=0.727481;DP=3149;DP4=1462,1566,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000167897;MQSB=0.957335;RPB=0.298339;SGB=25.1826;VDB=0.845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1216-S.SNP.10:22254470 chr10:022254470 0 W/22254470-22254470 FN1216-S Single Base Substitution T-C INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN4149-S.SNP.10:22262381 chr10:022262381 0 W/22262381-22262381 FN4149-S SNP G -> A AC=1;AN=170;BQB=0.996281;DP=1810;DP4=965,735,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.97137e-06;MQSB=0.999991;RPB=0.412225;SGB=43.4296;VDB=0.0699219;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G44|212|LOC_Os10g41420|protein_coding|CODING|LOC_Os10g41420.1|1|1) FN-292.SNP.10:22263051 chr10:022263051 0 W/22263051-22263051 FN-292 Single Base Substitution T-A INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN-46.SNP.10:22267300 chr10:022267300 0 W/22267300-22267300 FN-46 Single Base Substitution T-A INTERGENIC Homo SNo: 46, Mutant_ID: FN-46, Generation: M2, Mutations: 16, Genes: 6, Seed availability: Yes. FN-46.SNP.10:22267301 chr10:022267301 0 W/22267301-22267301 FN-46 Single Base Substitution T-A INTERGENIC Homo SNo: 46, Mutant_ID: FN-46, Generation: M2, Mutations: 16, Genes: 6, Seed availability: Yes. FN3312-S.SNP.10:22275508 chr10:022275508 0 W/22275508-22275508 FN3312-S SNP T -> C AC=1;AN=184;BQB=0.915408;DP=3232;DP4=1717,1387,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37229e-11;MQSB=0.87789;RPB=0.940978;SGB=35.884;VDB=0.840279;EFF=INTRON(MODIFIER||||458|LOC_Os10g41440|protein_coding|CODING|LOC_Os10g41440.1|1|1) FN1759-S.SNP.10:22275685 chr10:022275685 0 W/22275685-22275685 FN1759-S SNP G -> A AC=1;AN=188;BQB=0.111978;DP=3392;DP4=1668,1683,12,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69952e-09;MQSB=0.899154;RPB=0.91437;SGB=19.4279;VDB=0.547012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R124K|458|LOC_Os10g41440|protein_coding|CODING|LOC_Os10g41440.1|2|1) FN1049-S.SNP.10:22297271 chr10:022297271 0 W/22297271-22297271 FN1049-S Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3431-S.SNP.10:22298562 chr10:022298562 0 W/22298562-22298562 FN3431-S SNP C -> A AC=2;AN=184;BQB=0.957335;DP=3949;DP4=1736,2053,10,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.39837e-12;MQSB=0.596428;RPB=0.999646;SGB=60.4004;VDB=0.342363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.10:22314662 chr10:022314662 0 W/22314662-22314662 FN3760-S SNP C -> T AC=1;AN=190;BQB=0.947439;DP=2251;DP4=1107,1080,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11133e-05;MQSB=0.750561;RPB=0.694468;SGB=30.8803;VDB=0.131006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.10:22332486 chr10:022332486 0 W/22332486-22332486 FN3407-S SNP G -> A AC=1;AN=184;BQB=0.812473;DP=3526;DP4=1387,2036,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.73777e-07;MQSB=0.832395;RPB=0.555472;SGB=57.786;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.10:22340703 chr10:022340703 0 W/22340703-22340703 FN2210-S SNP T -> G AC=1;AN=190;BQB=0.98831;DP=4936;DP4=2375,2235,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32112e-09;MQSB=0.754926;RPB=0.891806;SGB=80.9724;VDB=0.235649;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.10:22342123 chr10:022342123 0 W/22342123-22342123 FN737-S Single Base Substitution T-C INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN1687-S.SNP.10:22343670 chr10:022343670 0 W/22343670-22343670 FN1687-S SNP T -> C AC=1;AN=188;BQB=5.0546e-06;DP=4061;DP4=1926,2089,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37758e-05;MQSB=0.999555;RPB=0.116126;SGB=-255.616;VDB=0.431013;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.10:22354769 chr10:022354769 0 W/22354769-22354769 FN993-S Single Base Substitution G-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN1220-S.SNP.10:22355828 chr10:022355828 0 W/22355828-22355828 FN1220-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN501-S.SNP.10:22362595 chr10:022362595 0 W/22362595-22362595 FN501-S Single Base Substitution C-T INTERGENIC HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN824-S.SNP.10:22364416 chr10:022364416 0 W/22364416-22364416 FN824-S Single Base Substitution C-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN3769-S.SNP.10:22366825 chr10:022366825 0 W/22366825-22366825 FN3769-S SNP G -> A AC=1;AN=190;BQB=0.645782;DP=3044;DP4=1118,1789,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.16446e-06;MQSB=0.941932;RPB=0.90197;SGB=58.2031;VDB=0.680992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.10:22368343 chr10:022368343 0 W/22368343-22368343 FN2419 SNP C -> T AC=1;AN=200;BQB=0.805411;DP=4935;DP4=2232,2066,11,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000202634;MQB=1.11462e-07;MQSB=3.73263e-08;RPB=0.469309;SGB=-92.8849;VDB=0.653735;EFF=INTERGENIC(MODIFIER||||||||||1) FN-77.SNP.10:22371438 chr10:022371438 0 W/22371438-22371438 FN-77 Single Base Substitution A-G INTERGENIC HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN-345.SNP.10:22372015 chr10:022372015 0 W/22372015-22372015 FN-345 Single Base Substitution T-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2201-S.SNP.10:22373040 chr10:022373040 0 W/22373040-22373040 FN2201-S SNP G -> T AC=1;AN=190;BQB=0.629039;DP=3834;DP4=1584,1828,12,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.92116e-06;MQSB=0.26106;RPB=0.847202;SGB=46.7622;VDB=0.301205;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.10:22373041 chr10:022373041 0 W/22373041-22373041 FN2201-S SNP C -> T AC=1;AN=190;BQB=0.389235;DP=3856;DP4=1732,1859,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.4642e-07;MQSB=0.349116;RPB=0.915037;SGB=49.0954;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.10:22374091 chr10:022374091 0 W/22374091-22374091 FN4123-S SNP C -> A AC=2;AN=182;BQB=0.977026;DP=3205;DP4=1611,1509,15,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.09977e-11;MQSB=0.900735;RPB=0.934962;SGB=63.7146;VDB=0.870515;EFF=INTRON(MODIFIER||||351|LOC_Os10g41580|protein_coding|CODING|LOC_Os10g41580.1|3|1) FN497-S.SNP.10:22378616 chr10:022378616 0 W/22378616-22378616 FN497-S Single Base Substitution C-A INTERGENIC HOMO SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1384-S.SNP.10:22382694 chr10:022382694 0 W/22382694-22382694 FN1384-S Single Base Substitution G-A INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN980-S.SNP.10:22382792 chr10:022382792 0 W/22382792-22382792 FN980-S Single Base Substitution G-T INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. W276-2-1.SNP.10:22384224 chr10:022384224 0 W/22384224-22384224 W276-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. W276-2-1.SNP.10:22384226 chr10:022384226 0 W/22384226-22384226 W276-2-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3831-S.SNP.10:22411014 chr10:022411014 0 W/22411014-22411014 FN3831-S SNP T -> A AC=1;AN=190;BQB=0.807341;DP=2825;DP4=1540,1185,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00389381;MQB=0.0229306;MQSB=0.00908996;RPB=0.562536;SGB=80.9724;VDB=0.191782;EFF=INTRON(MODIFIER||||693|LOC_Os10g41620|protein_coding|CODING|LOC_Os10g41620.1|7|1) FN2657-S.SNP.10:22411589 chr10:022411589 0 W/22411589-22411589 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.999879;DP=4773;DP4=2348,2182,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000209512;MQB=5.65729e-12;MQSB=0.538449;RPB=0.856431;SGB=81.8956;VDB=0.0300525;EFF=INTRON(MODIFIER||||693|LOC_Os10g41620|protein_coding|CODING|LOC_Os10g41620.1|7|1) FN3833-S.SNP.10:22428508 chr10:022428508 0 W/22428508-22428508 FN3833-S SNP T -> C AC=1;AN=190;BQB=0.537148;DP=2785;DP4=1213,1486,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.11686e-08;MQSB=0.917844;RPB=0.472452;SGB=46.7622;VDB=0.696424;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.10:22432509 chr10:022432509 0 W/22432509-22432509 FN624-S Single Base Substitution G-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2372.SNP.10:22435765 chr10:022435765 0 W/22435765-22435765 FN2372 SNP G -> T AC=1;AN=192;BQB=0.134781;DP=4514;DP4=2047,2158,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02185e-08;MQSB=0.666813;RPB=0.25845;SGB=-37.0704;VDB=0.470238;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L132|371|LOC_Os10g41660|protein_coding|CODING|LOC_Os10g41660.1|1|1) FN3549-S.SNP.10:22436358 chr10:022436358 0 W/22436358-22436358 FN3549-S SNP C -> A AC=1;AN=188;BQB=0.510474;DP=3219;DP4=1187,1876,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.45836e-05;MQSB=0.48044;RPB=0.82545;SGB=28.8977;VDB=0.754408;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A330E|371|LOC_Os10g41660|protein_coding|CODING|LOC_Os10g41660.1|1|1) FN850-S.SNP.10:22442862 chr10:022442862 0 W/22442862-22442862 FN850-S Single Base Substitution C-T INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN_769-4-1.SNP.10:22449684 chr10:022449684 0 W/22449684-22449684 FN_769-4-1 Single Base Substitution G-A HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1456-S.SNP.10:22451094 chr10:022451094 0 W/22451094-22451094 FN1456-S Single Base Substitution A-T INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3363-S.SNP.10:22463614 chr10:022463614 0 W/22463614-22463614 FN3363-S SNP C -> T AC=2;AN=184;BQB=0.974415;DP=3362;DP4=1970,1281,19,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.1621e-17;MQSB=0.884291;RPB=0.448185;SGB=99.14;VDB=0.23697;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.10:22476491 chr10:022476491 0 W/22476491-22476491 FN939-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os10g41760 chlorophyllide a oxygenase, chloroplast precursor, putative, expressed SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN462-S.SNP.10:22486541 chr10:022486541 0 W/22486541-22486541 FN462-S Single Base Substitution G-A INTERGENIC HOMO SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN224-S.SNP.10:22490247 chr10:022490247 0 W/22490247-22490247 FN224-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g41790 type II intron maturase protein, putative, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1405-S.SNP.10:22499904 chr10:022499904 0 W/22499904-22499904 FN1405-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2540-S.SNP.10:22510643 chr10:022510643 0 W/22510643-22510643 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.546217;DP=4071;DP4=1857,1999,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.34422e-10;MQSB=0.975793;RPB=0.266982;SGB=47.3393;VDB=0.175954;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.10:22517907 chr10:022517907 0 W/22517907-22517907 FN-111 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1762-S.SNP.10:22517996 chr10:022517996 0 W/22517996-22517996 FN1762-S SNP T -> A AC=2;AN=188;BQB=0.458445;DP=3571;DP4=2344,1186,15,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.65761e-14;MQSB=0.654409;RPB=0.891693;SGB=-42.845;VDB=0.942205;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.10:22524143 chr10:022524143 0 W/22524143-22524143 FN-188 Single Base Substitution T-C INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2731-S.SNP.10:22534403 chr10:022534403 0 W/22534403-22534403 FN2731-S SNP T -> G AC=1;AN=200;BQB=0.305269;DP=4764;DP4=2256,2231,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.96828e-09;MQSB=0.802086;RPB=0.879281;SGB=58.8698;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.10:22540191 chr10:022540191 0 W/22540191-22540191 FN-71 Single Base Substitution T-A INTERGENIC HET SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN-41.SNP.10:22540434 chr10:022540434 0 W/22540434-22540434 FN-41 Single Base Substitution G-A INTERGENIC Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN620-S.SNP.10:22547112 chr10:022547112 0 W/22547112-22547112 FN620-S Single Base Substitution C-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN1367-S.SNP.10:22549187 chr10:022549187 0 W/22549187-22549187 FN1367-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os10g41910 expressed protein SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN439-S.SNP.10:22552254 chr10:022552254 0 W/22552254-22552254 FN439-S Single Base Substitution G-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN3449-S.SNP.10:22556093 chr10:022556093 0 W/22556093-22556093 FN3449-S SNP T -> C AC=2;AN=184;BQB=0.846773;DP=3247;DP4=1262,1834,17,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.18084e-22;MQSB=0.995083;RPB=0.338016;SGB=166.309;VDB=0.583636;EFF=UTR_5_PRIME(MODIFIER||643||162|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.7|1|1),UTR_5_PRIME(MODIFIER||1020||110|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.4|1|1),UTR_5_PRIME(MODIFIER||643||162|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.3|1|1),INTRON(MODIFIER||||289|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.6|1|1),INTRON(MODIFIER||||288|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.1|1|1),INTRON(MODIFIER||||287|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.2|1|1),INTRON(MODIFIER||||110|LOC_Os10g41930|protein_coding|CODING|LOC_Os10g41930.5|1|1) FN879-S.SNP.10:22559576 chr10:022559576 0 W/22559576-22559576 FN879-S Single Base Substitution A-G INTRON HOMO SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN358-S.SNP.10:22572158 chr10:022572158 0 W/22572158-22572158 FN358-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os10g41970 methyltransferase, putative, expressed SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN922-S.SNP.10:22584173 chr10:022584173 0 W/22584173-22584173 FN922-S Single Base Substitution T-C INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN-236.SNP.10:22584778 chr10:022584778 0 W/22584778-22584778 FN-236 Single Base Substitution G-C INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN4124-S.SNP.10:22585256 chr10:022585256 0 W/22585256-22585256 FN4124-S SNP A -> G AC=1;AN=182;BQB=0.763872;DP=2938;DP4=1473,1381,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.93285e-09;MQSB=0.998558;RPB=0.995043;SGB=25.655;VDB=0.166173;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.10:22593470 chr10:022593470 0 W/22593470-22593470 FN881-S Single Base Substitution C-T INTERGENIC HOMO SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN4126-S.SNP.10:22594718 chr10:022594718 0 W/22594718-22594718 FN4126-S SNP A -> G AC=2;AN=182;BQB=0.849509;DP=2957;DP4=1519,1362,14,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.59655e-12;MQSB=0.984836;RPB=0.307735;SGB=38.2092;VDB=0.178799;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.10:22597304 chr10:022597304 0 W/22597304-22597304 FN_786-4-1 Single Base Substitution G-A Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3674-S.SNP.10:22599412 chr10:022599412 0 W/22599412-22599412 FN3674-S SNP C -> A AC=1;AN=190;BQB=0.998352;DP=2578;DP4=1018,1465,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38904e-06;MQSB=0.944555;RPB=0.89417;SGB=49.0954;VDB=0.915024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Aag|Q217K|296|LOC_Os10g42030|protein_coding|CODING|LOC_Os10g42030.1|3|1) FN1713-S.SNP.10:22602572 chr10:022602572 0 W/22602572-22602572 FN1713-S SNP C -> T AC=1;AN=188;BQB=0.0390198;DP=4415;DP4=1848,2523,22,14;HOB=5.65867e-05;ICB=0.000113775;MQ=19;MQ0F=0.47316;MQB=0.0328739;MQSB=0;RPB=0.95967;SGB=-247.362;VDB=0.409424;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.10:22606076 chr10:022606076 0 W/22606076-22606076 FN4176-S SNP C -> T AC=1;AN=170;BQB=0.720724;DP=1646;DP4=933,568,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.0036452;MQB=0.00694786;MQSB=0.122071;RPB=0.208962;SGB=10.1134;VDB=0.346864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.10:22611062 chr10:022611062 0 W/22611062-22611062 FN2429 SNP C -> A AC=1;AN=200;BQB=1;DP=3372;DP4=1711,1246,3,5;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0157177;MQB=0.0114535;MQSB=0.00113432;RPB=0.335849;SGB=31.2392;VDB=0.62634;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.10:22620442 chr10:022620442 0 W/22620442-22620442 FN4101-S SNP G -> A AC=1;AN=182;BQB=0.815869;DP=3214;DP4=1456,1697,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=32;MQ0F=0.0930305;MQB=0.998324;MQSB=6.87346e-10;RPB=0.999708;SGB=49.6712;VDB=0.873398;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L1478|1565|LOC_Os10g42050|protein_coding|CODING|LOC_Os10g42050.1|3|1) FN3662-S.SNP.10:22625252 chr10:022625252 0 W/22625252-22625252 FN3662-S SNP G -> A AC=1;AN=190;BQB=0.907478;DP=2735;DP4=1237,1423,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0691042;MQB=0.595351;MQSB=2.9298e-17;RPB=0.997417;SGB=35.4339;VDB=0.391945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2269-S.SNP.10:22626796 chr10:022626796 0 W/22626796-22626796 FN2269-S SNP G -> A AC=1;AN=190;BQB=0.966568;DP=5384;DP4=2514,2502,13,21;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.110327;MQB=0.895983;MQSB=0.880469;RPB=0.651375;SGB=110.732;VDB=0.273273;EFF=INTERGENIC(MODIFIER||||||||||1) FN3740-S.SNP.10:22628808 chr10:022628808 0 W/22628808-22628808 FN3740-S SNP C -> T AC=2;AN=190;BQB=0.998412;DP=2579;DP4=1031,1432,7,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.01576e-09;MQSB=0.823927;RPB=0.982808;SGB=38.983;VDB=0.821482;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A282|296|LOC_Os10g42060|protein_coding|CODING|LOC_Os10g42060.1|1|1) FN_846-8-1.SNP.10:22631595 chr10:022631595 0 W/22631595-22631595 FN_846-8-1 Single Base Substitution C-G HET SNo: 1501, Mutant_ID: FN_846-8-1, Generation: M3, Mutations: 51, Genes: 9, Seed availability: No. FN1028-S.SNP.10:22634844 chr10:022634844 0 W/22634844-22634844 FN1028-S Single Base Substitution G-A INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2662-S.SNP.10:22643674 chr10:022643674 0 W/22643674-22643674 FN2662-S SNP G -> C AC=1;AN=200;BQB=0.996711;DP=5118;DP4=2424,2442,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29538e-11;MQSB=0.968136;RPB=0.932702;SGB=86.5007;VDB=0.506205;EFF=INTRON(MODIFIER||||570|LOC_Os10g42100|protein_coding|CODING|LOC_Os10g42100.1|8|1) FN2790-S.SNP.10:22649473 chr10:022649473 0 W/22649473-22649473 FN2790-S SNP A -> G AC=2;AN=198;BQB=0.594756;DP=4803;DP4=2609,1943,36,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.15474e-36;MQSB=0.999841;RPB=0.96779;SGB=270.115;VDB=0.0447596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.10:22649587 chr10:022649587 0 W/22649587-22649587 FN3341-S SNP C -> T AC=1;AN=184;BQB=0.997683;DP=3399;DP4=1493,1775,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.97216e-08;MQSB=0.721892;RPB=0.952676;SGB=62.3078;VDB=0.639929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1645-S.SNP.10:22650803 chr10:022650803 0 W/22650803-22650803 FN1645-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN801-S.SNP.10:22658785 chr10:022658785 0 W/22658785-22658785 FN801-S Single Base Substitution G-C INTERGENIC HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN4070-S.SNP.10:22659159 chr10:022659159 0 W/22659159-22659159 FN4070-S SNP C -> T AC=1;AN=182;BQB=0.887605;DP=3044;DP4=1691,1240,14,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.96693e-16;MQSB=0.975744;RPB=0.886173;SGB=107.263;VDB=0.235984;EFF=INTERGENIC(MODIFIER||||||||||1) FN1712-S.SNP.10:22686574 chr10:022686574 0 W/22686574-22686574 FN1712-S SNP G -> A AC=1;AN=188;BQB=0.00411614;DP=2633;DP4=1595,989,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.12259e-05;MQSB=0.988309;RPB=0.139294;SGB=-37.8212;VDB=0.859491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2292.SNP.10:22708879 chr10:022708879 0 W/22708879-22708879 FN2292 SNP T -> G AC=1;AN=192;BQB=0.839158;DP=5046;DP4=2587,2158,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.52096e-15;MQSB=0.955111;RPB=0.999032;SGB=-7.9965;VDB=0.567515;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.10:22710825 chr10:022710825 0 W/22710825-22710825 FN4229-S SNP T -> C AC=1;AN=170;BQB=0.953992;DP=1716;DP4=883,751,3,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01107e-07;MQSB=0.956401;RPB=0.746476;SGB=14.9986;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.10:22714062 chr10:022714062 0 W/22714062-22714062 FN3478-S SNP T -> C AC=1;AN=184;BQB=0.995695;DP=3233;DP4=1653,1507,5,14;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.491494;MQB=0.0464754;MQSB=0;RPB=0.93322;SGB=80.3949;VDB=0.435249;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q1242R|1264|LOC_Os10g42202|protein_coding|CODING|LOC_Os10g42202.1|3|1) FN3115-S.SNP.10:22721470 chr10:022721470 0 W/22721470-22721470 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.710365;DP=2899;DP4=1227,1370,12,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37649e-10;MQSB=0.822307;RPB=0.442353;SGB=18.9766;VDB=0.840829;EFF=INTERGENIC(MODIFIER||||||||||1) FN920-S.SNP.10:22721671 chr10:022721671 0 W/22721671-22721671 FN920-S Single Base Substitution G-C INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN927-S.SNP.10:22721786 chr10:022721786 0 W/22721786-22721786 FN927-S Single Base Substitution G-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN3377-S.SNP.10:22733649 chr10:022733649 0 W/22733649-22733649 FN3377-S SNP G -> T AC=1;AN=184;BQB=0.778899;DP=2964;DP4=1274,1533,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.99937e-05;MQSB=0.943121;RPB=0.453007;SGB=25.1826;VDB=0.882989;EFF=INTRON(MODIFIER||||361|LOC_Os10g42210|protein_coding|CODING|LOC_Os10g42210.1|1|1) FN3652-S.SNP.10:22733649 chr10:022733649 0 W/22733649-22733649 FN3652-S SNP G -> T AC=2;AN=190;BQB=0.341026;DP=2568;DP4=896,1492,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.99974e-09;MQSB=0.96981;RPB=0.998367;SGB=-36.7706;VDB=0.814294;EFF=INTRON(MODIFIER||||361|LOC_Os10g42210|protein_coding|CODING|LOC_Os10g42210.1|1|1) FN793-S.SNP.10:22733649 chr10:022733649 0 W/22733649-22733649 FN793-S Single Base Substitution G-T INTRON HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3295-S.SNP.10:22739894 chr10:022739894 0 W/22739894-22739894 FN3295-S SNP A -> C AC=2;AN=184;BQB=0.98296;DP=2945;DP4=1496,1340,12,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.7769e-15;MQSB=0.820816;RPB=0.610506;SGB=43.4494;VDB=0.456139;EFF=INTRON(MODIFIER||||209|LOC_Os10g42220|protein_coding|CODING|LOC_Os10g42220.1|1|1) FN3295-S.SNP.10:22739896 chr10:022739896 0 W/22739896-22739896 FN3295-S SNP T -> A AC=2;AN=184;BQB=0.946055;DP=2966;DP4=1485,1379,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.47463e-15;MQSB=0.928232;RPB=0.563963;SGB=70.9657;VDB=0.220728;EFF=INTRON(MODIFIER||||209|LOC_Os10g42220|protein_coding|CODING|LOC_Os10g42220.1|1|1) FN3692-S.SNP.10:22743027 chr10:022743027 0 W/22743027-22743027 FN3692-S SNP G -> A AC=1;AN=190;BQB=0.404788;DP=2955;DP4=1558,1269,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.83805e-05;MQSB=0.729658;RPB=0.748921;SGB=21.8853;VDB=0.54263;EFF=INTRON(MODIFIER||||405|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.1|4|1),INTRON(MODIFIER||||405|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.2|4|1),INTRON(MODIFIER||||200|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.3|1|1) FN3692-S.SNP.10:22743028 chr10:022743028 0 W/22743028-22743028 FN3692-S SNP C -> G AC=1;AN=190;BQB=0.940087;DP=2954;DP4=1582,1269,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.95664e-05;MQSB=0.706784;RPB=0.563776;SGB=26.3271;VDB=0.585123;EFF=INTRON(MODIFIER||||405|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.1|4|1),INTRON(MODIFIER||||405|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.2|4|1),INTRON(MODIFIER||||200|LOC_Os10g42230|protein_coding|CODING|LOC_Os10g42230.3|1|1) FN3523-S.SNP.10:22747165 chr10:022747165 0 W/22747165-22747165 FN3523-S SNP C -> T AC=2;AN=188;BQB=0.919881;DP=3468;DP4=1436,1872,17,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.31896e-20;MQSB=0.988342;RPB=0.978255;SGB=79.4854;VDB=0.0114461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.10:22748849 chr10:022748849 0 W/22748849-22748849 FN3947-S SNP C -> A AC=1;AN=168;BQB=0.988895;DP=2775;DP4=1266,1389,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.31658e-14;MQSB=0.437099;RPB=0.876238;SGB=105.343;VDB=0.852641;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.10:22751246 chr10:022751246 0 W/22751246-22751246 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.998282;DP=4899;DP4=2141,2521,10,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.70946e-20;MQSB=0.963222;RPB=0.795002;SGB=105.163;VDB=0.988605;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V189M|458|LOC_Os10g42240|protein_coding|CODING|LOC_Os10g42240.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V189M|308|LOC_Os10g42240|protein_coding|CODING|LOC_Os10g42240.2|2|1) FN-279.SNP.10:22754221 chr10:022754221 0 W/22754221-22754221 FN-279 Single Base Substitution C-T START_GAINED HET LOC_Os10g42250 expressed protein SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN449-S.SNP.10:22754694 chr10:022754694 0 W/22754694-22754694 FN449-S Single Base Substitution G-T INTRON HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1007-S.SNP.10:22755360 chr10:022755360 0 W/22755360-22755360 FN1007-S Single Base Substitution G-T INTRON HET SNo: 908, Mutant_ID: FN1007-S, Generation: M2, Mutations: 28, Genes: 7, Seed availability: Yes. FN-287.SNP.10:22761855 chr10:022761855 0 W/22761855-22761855 FN-287 Single Base Substitution T-A INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2150-S.SNP.10:22765201 chr10:022765201 0 W/22765201-22765201 FN2150-S SNP C -> T AC=2;AN=168;BQB=0.610166;DP=3004;DP4=1697,1276,12,2;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.66972e-06;MQSB=0.967225;RPB=0.604232;SGB=1.32907;VDB=0.588227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2085-S.SNP.10:22766738 chr10:022766738 0 W/22766738-22766738 FN2085-S SNP C -> G AC=2;AN=168;BQB=0.97386;DP=1969;DP4=909,967,14,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.60152e-12;MQSB=0.798401;RPB=0.08415;SGB=19.9297;VDB=0.306609;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L91|212|LOC_Os10g42280|protein_coding|CODING|LOC_Os10g42280.1|1|1) FN2754-S.SNP.10:22766780 chr10:022766780 0 W/22766780-22766780 FN2754-S SNP C -> A AC=1;AN=200;BQB=0.855782;DP=4727;DP4=2312,2140,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48595e-10;MQSB=0.692915;RPB=0.999117;SGB=81.8956;VDB=0.987859;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L105|212|LOC_Os10g42280|protein_coding|CODING|LOC_Os10g42280.1|1|1) FN1709-S.SNP.10:22767030 chr10:022767030 0 W/22767030-22767030 FN1709-S SNP G -> T AC=1;AN=188;BQB=0.968129;DP=2032;DP4=1379,575,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000231812;MQSB=0.407906;RPB=0.881406;SGB=30.8063;VDB=0.251998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V189F|212|LOC_Os10g42280|protein_coding|CODING|LOC_Os10g42280.1|1|1) FN1330-S.SNP.10:22785591 chr10:022785591 0 W/22785591-22785591 FN1330-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN2234-S.SNP.10:22785591 chr10:022785591 0 W/22785591-22785591 FN2234-S SNP T -> A AC=1;AN=190;BQB=0.667727;DP=3945;DP4=1683,1786,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.63465e-07;MQSB=0.398011;RPB=0.510131;SGB=-78.9755;VDB=0.401376;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.10:22785591 chr10:022785591 0 W/22785591-22785591 FN456-S Single Base Substitution T-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN3752-S.SNP.10:22785592 chr10:022785592 0 W/22785592-22785592 FN3752-S SNP A -> T AC=2;AN=190;BQB=0.935783;DP=2677;DP4=1367,1144,11,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.4795e-08;MQSB=0.235373;RPB=0.429262;SGB=-37.2167;VDB=0.360248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.10:22791897 chr10:022791897 0 W/22791897-22791897 FN2083-S SNP A -> G AC=1;AN=168;BQB=5.91658e-33;DP=4173;DP4=1936,2132,62,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.667554;RPB=0.00177292;SGB=-1242.73;VDB=0.0011277;EFF=INTRON(MODIFIER||||242|LOC_Os10g42340|protein_coding|CODING|LOC_Os10g42340.1|1|1) FN2083-S.SNP.10:22791933 chr10:022791933 0 W/22791933-22791933 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.29958;DP=4060;DP4=2072,1885,38,41;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.997635;RPB=0.988201;SGB=-1313.54;VDB=0.998405;EFF=INTRON(MODIFIER||||242|LOC_Os10g42340|protein_coding|CODING|LOC_Os10g42340.1|1|1) FN4187-S.SNP.10:22792954 chr10:022792954 0 W/22792954-22792954 FN4187-S SNP T -> C AC=2;AN=170;BQB=0.997548;DP=2116;DP4=1067,993,9,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.39954e-08;MQSB=0.976029;RPB=0.376086;SGB=61.2001;VDB=0.559805;EFF=INTRON(MODIFIER||||242|LOC_Os10g42340|protein_coding|CODING|LOC_Os10g42340.1|1|1) FN829-S.SNP.10:22805012 chr10:022805012 0 W/22805012-22805012 FN829-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os10g42364 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN4311-S.SNP.10:22805950 chr10:022805950 0 W/22805950-22805950 FN4311-S SNP C -> T AC=1;AN=170;BQB=0.920847;DP=2767;DP4=1423,1264,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.66672e-09;MQSB=0.504229;RPB=0.722127;SGB=65.6427;VDB=0.900864;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1253|1759|LOC_Os10g42364|protein_coding|CODING|LOC_Os10g42364.1|5|1) FN1262-S.SNP.10:22806021 chr10:022806021 0 W/22806021-22806021 FN1262-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os10g42364 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2705-S.SNP.10:22808781 chr10:022808781 0 W/22808781-22808781 FN2705-S SNP T -> C AC=1;AN=200;BQB=0.860583;DP=4836;DP4=2235,2359,7,8;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00765095;MQB=0.128315;MQSB=0.962995;RPB=0.585048;SGB=63.4749;VDB=0.905115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S360G|1759|LOC_Os10g42364|protein_coding|CODING|LOC_Os10g42364.1|4|1) FN884-S.SNP.10:22808911 chr10:022808911 0 W/22808911-22808911 FN884-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN623-S.SNP.10:22811758 chr10:022811758 0 W/22811758-22811758 FN623-S Single Base Substitution C-A INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN1227-S.SNP.10:22812170 chr10:022812170 0 W/22812170-22812170 FN1227-S Single Base Substitution G-A INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN3715-S.SNP.10:22815472 chr10:022815472 0 W/22815472-22815472 FN3715-S SNP T -> A AC=1;AN=190;BQB=0.90788;DP=2758;DP4=1338,1299,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.492e-09;MQSB=0.997397;RPB=0.41669;SGB=26.2136;VDB=0.0742235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.10:22822941 chr10:022822941 0 W/22822941-22822941 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.992742;DP=1848;DP4=813,940,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000541126;MQB=3.64897e-08;MQSB=0.0893873;RPB=0.977287;SGB=64.5449;VDB=0.971451;EFF=INTRON(MODIFIER||||603|LOC_Os10g42400|protein_coding|CODING|LOC_Os10g42400.1|2|1) FN1380-S.SNP.10:22824430 chr10:022824430 0 W/22824430-22824430 FN1380-S Single Base Substitution A-T INTERGENIC HET SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. W360-2S-2.SNP.10:22824430 chr10:022824430 0 W/22824430-22824430 W360-2S-2 Single Base Substitution A-T INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3730-S.SNP.10:22824965 chr10:022824965 0 W/22824965-22824965 FN3730-S SNP G -> A AC=2;AN=190;BQB=0.972731;DP=1746;DP4=453,1201,2,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000572738;MQB=1.08639e-07;MQSB=0.00373442;RPB=0.814097;SGB=58.2031;VDB=0.387118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.10:22824968 chr10:022824968 0 W/22824968-22824968 FN3730-S SNP A -> C AC=2;AN=190;BQB=0.468649;DP=1706;DP4=390,1164,3,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.16671e-08;MQSB=0.0363702;RPB=0.996311;SGB=39.6545;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3730-S.SNP.10:22824969 chr10:022824969 0 W/22824969-22824969 FN3730-S SNP G -> T AC=2;AN=190;BQB=0.195074;DP=1703;DP4=418,1185,2,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000587199;MQB=7.08454e-08;MQSB=0.011283;RPB=0.962873;SGB=58.2031;VDB=0.385224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.10:22825839 chr10:022825839 0 W/22825839-22825839 FN2417 SNP G -> A AC=1;AN=200;BQB=0.529163;DP=3891;DP4=1977,1683,8,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.21289e-05;MQSB=0.97706;RPB=0.14118;SGB=35.8441;VDB=0.270411;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.10:22827630 chr10:022827630 0 W/22827630-22827630 FN3478-S SNP C -> T AC=1;AN=184;BQB=0.99969;DP=2453;DP4=1379,1008,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01945e-09;MQSB=0.988489;RPB=0.984868;SGB=71.3514;VDB=0.791477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.10:22830732 chr10:022830732 0 W/22830732-22830732 FN2749-S SNP T -> C AC=1;AN=200;BQB=0.171163;DP=4794;DP4=2122,2371,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05148e-05;MQSB=0.941326;RPB=0.115989;SGB=-13.7154;VDB=0.929169;EFF=UTR_5_PRIME(MODIFIER||199||186|LOC_Os10g42410|protein_coding|CODING|LOC_Os10g42410.2|1|1),INTRON(MODIFIER||||254|LOC_Os10g42410|protein_coding|CODING|LOC_Os10g42410.1|1|1),INTRON(MODIFIER||||285|LOC_Os10g42410|protein_coding|CODING|LOC_Os10g42410.3|1|1) FN2674-S.SNP.10:22833945 chr10:022833945 0 W/22833945-22833945 FN2674-S SNP A -> G AC=1;AN=200;BQB=0.878844;DP=5413;DP4=2283,2823,15,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.51338e-19;MQSB=0.941947;RPB=0.963372;SGB=-3.42751;VDB=0.0742737;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.10:22838946 chr10:022838946 0 W/22838946-22838946 FN4163-S SNP T -> A AC=2;AN=170;BQB=0.918487;DP=2457;DP4=1214,1180,9,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.5416e-10;MQSB=0.999442;RPB=0.107541;SGB=65.6427;VDB=0.571004;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A204|407|LOC_Os10g42420|protein_coding|CODING|LOC_Os10g42420.1|3|1) FN3974-S.SNP.10:22842409 chr10:022842409 0 W/22842409-22842409 FN3974-S SNP T -> C AC=1;AN=168;BQB=0.793353;DP=2414;DP4=1199,1146,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00041425;MQB=3.5052e-08;MQSB=0.000811319;RPB=0.805551;SGB=61.0344;VDB=0.500953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.10:22845149 chr10:022845149 0 W/22845149-22845149 FN2529-S SNP G -> A AC=1;AN=198;BQB=0.987456;DP=4244;DP4=2380,1581,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.59732e-05;MQSB=0.88539;RPB=0.580853;SGB=-1.81641;VDB=0.165711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.10:22845938 chr10:022845938 0 W/22845938-22845938 FN2181-S SNP C -> A AC=1;AN=190;BQB=0.968355;DP=5142;DP4=2568,2201,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000194477;MQB=2.78714e-10;MQSB=0.935375;RPB=0.720478;SGB=26.2136;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.10:22851814 chr10:022851814 0 W/22851814-22851814 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.998772;DP=2654;DP4=1290,1260,6,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.30103e-11;MQSB=0.993867;RPB=0.868403;SGB=48.6486;VDB=0.10658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.10:22854623 chr10:022854623 0 W/22854623-22854623 FN2661-S SNP C -> A AC=1;AN=200;BQB=0.46486;DP=4933;DP4=2370,2327,11,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.77181e-18;MQSB=0.788531;RPB=0.830451;SGB=90.7419;VDB=0.771856;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.10:22858501 chr10:022858501 0 W/22858501-22858501 FN4109-S SNP C -> T AC=1;AN=182;BQB=0.734852;DP=3292;DP4=1648,1391,10,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.05322e-08;MQSB=0.133362;RPB=0.915583;SGB=57.644;VDB=0.705322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A460V|751|LOC_Os10g42430|protein_coding|CODING|LOC_Os10g42430.1|1|1) FN1072-S.SNP.10:22873780 chr10:022873780 0 W/22873780-22873780 FN1072-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os10g42439 heat shock protein DnaJ, putative, expressed SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3360-S.SNP.10:22877805 chr10:022877805 0 W/22877805-22877805 FN3360-S SNP G -> A AC=2;AN=184;BQB=0.989167;DP=2712;DP4=1252,1348,17,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.25593e-17;MQSB=0.758658;RPB=0.453883;SGB=92.0965;VDB=0.597652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.10:22882040 chr10:022882040 0 W/22882040-22882040 FN3627-S SNP C -> T AC=1;AN=190;BQB=0.917889;DP=1416;DP4=683,644,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000706215;MQB=9.22218e-07;MQSB=0.464874;RPB=0.993049;SGB=49.0954;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3613-S.SNP.10:22883494 chr10:022883494 0 W/22883494-22883494 FN3613-S SNP T -> C AC=1;AN=190;BQB=0.998694;DP=3027;DP4=1301,1611,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.139412;MQB=0.924537;MQSB=6.39305e-17;RPB=0.32196;SGB=57.4238;VDB=0.663348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.10:22897440 chr10:022897440 0 W/22897440-22897440 FN3478-S SNP T -> C AC=1;AN=184;BQB=0.677882;DP=4656;DP4=2508,1972,16,9;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0266323;MQB=0.647857;MQSB=0.00276837;RPB=0.81601;SGB=107.526;VDB=0.86621;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I234T|1099|LOC_Os10g42470|protein_coding|CODING|LOC_Os10g42470.1|2|1) FN3383-S.SNP.10:22897986 chr10:022897986 0 W/22897986-22897986 FN3383-S SNP C -> G AC=1;AN=184;BQB=0.487145;DP=3724;DP4=1396,2214,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0150376;MQB=0.01487;MQSB=6.20772e-25;RPB=0.992538;SGB=33.3622;VDB=0.815581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P416R|1099|LOC_Os10g42470|protein_coding|CODING|LOC_Os10g42470.1|2|1) FN2268-S.SNP.10:22898760 chr10:022898760 0 W/22898760-22898760 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.201216;DP=6103;DP4=2628,3092,12,18;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0132722;MQB=0.0152236;MQSB=1.05742e-22;RPB=0.664939;SGB=96.5165;VDB=0.622531;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T674I|1099|LOC_Os10g42470|protein_coding|CODING|LOC_Os10g42470.1|2|1) FN3354-S.SNP.10:22903778 chr10:022903778 0 W/22903778-22903778 FN3354-S SNP G -> C AC=2;AN=184;BQB=0.912757;DP=3600;DP4=1890,1533,24,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000833333;MQB=1.61811e-18;MQSB=0.436738;RPB=0.818387;SGB=193.44;VDB=0.338573;EFF=INTRON(MODIFIER||||638|LOC_Os10g42480|protein_coding|CODING|LOC_Os10g42480.1|1|1) FN-263.SNP.10:22903797 chr10:022903797 0 W/22903797-22903797 FN-263 Single Base Substitution C-G INTRON HET SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN1033-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN1033-S Single Base Substitution G-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1046-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN1046-S Single Base Substitution G-T INTERGENIC HOMO SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1496-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN1496-S Single Base Substitution G-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN1517-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN1517-S Single Base Substitution G-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN1734-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN1734-S SNP G -> T AC=1;AN=188;BQB=0.908989;DP=2575;DP4=1152,1394,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.152621;MQB=0.950152;MQSB=0.104941;RPB=0.942294;SGB=28.6195;VDB=0.769537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2142-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN2142-S SNP G -> T AC=2;AN=168;BQB=0.137529;DP=2974;DP4=1316,1608,15,19;HOB=0.0235261;ICB=0.494119;MQ=23;MQ0F=0.17384;MQB=0.498703;MQSB=0.00620969;RPB=0.99433;SGB=-123.754;VDB=0.872944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN2209-S SNP G -> T AC=2;AN=190;BQB=0.800384;DP=4870;DP4=2113,2441,20,33;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0468172;MQB=0.00840567;MQSB=7.13858e-27;RPB=0.278963;SGB=178.256;VDB=0.0366343;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN2415 SNP G -> T AC=2;AN=200;BQB=0.23388;DP=4763;DP4=2013,2480,29,21;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0388411;MQB=0.997897;MQSB=3.00764e-25;RPB=0.999562;SGB=224.656;VDB=0.141391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN2657-S SNP G -> T AC=2;AN=200;BQB=0.0847692;DP=4900;DP4=2129,2517,28,43;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.047551;MQB=0.602097;MQSB=1.04963e-32;RPB=0.95965;SGB=155.39;VDB=0.230692;EFF=INTERGENIC(MODIFIER||||||||||1) FN3656-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN3656-S SNP G -> T AC=2;AN=190;BQB=0.939408;DP=2923;DP4=1443,1381,8,13;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.133425;MQB=0.276796;MQSB=7.95555e-17;RPB=0.584113;SGB=90.0802;VDB=0.676971;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN3850-S SNP G -> T AC=2;AN=158;BQB=0.999816;DP=3027;DP4=1403,1522,13,10;HOB=0.024996;ICB=0.493752;MQ=30;MQ0F=0.135117;MQB=0.163593;MQSB=2.00337e-18;RPB=0.574944;SGB=95.131;VDB=0.625407;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN4132-S SNP G -> T AC=2;AN=182;BQB=0.90115;DP=3463;DP4=1683,1694,14,12;HOB=0.0217365;ICB=0.494567;MQ=33;MQ0F=0.0837424;MQB=0.868463;MQSB=5.76778e-13;RPB=0.0925625;SGB=20.2582;VDB=0.800696;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN679-S Single Base Substitution G-T INTERGENIC HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN754-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN754-S Single Base Substitution G-T INTERGENIC HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN857-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN857-S Single Base Substitution G-T INTERGENIC HOMO SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN900-S.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN900-S Single Base Substitution G-T INTERGENIC HET SNo: 806, Mutant_ID: FN900-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: Yes. FN_830-6-1.SNP.10:22905633 chr10:022905633 0 W/22905633-22905633 FN_830-6-1 Single Base Substitution G-T Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3469-S.SNP.10:22920858 chr10:022920858 0 W/22920858-22920858 FN3469-S SNP A -> T AC=2;AN=184;BQB=0.0358238;DP=3017;DP4=1212,1161,9,40;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.37202e-17;MQSB=0.691697;RPB=0.0228;SGB=-529.986;VDB=0.00427378;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q109H|374|LOC_Os10g42500|protein_coding|CODING|LOC_Os10g42500.1|1|1) FN4137-S.SNP.10:22923461 chr10:022923461 0 W/22923461-22923461 FN4137-S SNP T -> C AC=1;AN=170;BQB=0.961475;DP=2453;DP4=1214,1168,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.72295e-07;MQSB=0.987064;RPB=0.0461398;SGB=34.878;VDB=0.18489;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.10:22928165 chr10:022928165 0 W/22928165-22928165 W276-2-1 Single Base Substitution T-C INTRON HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN_789-2-1.SNP.10:22948078 chr10:022948078 0 W/22948078-22948078 FN_789-2-1 Single Base Substitution C-A Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN_789-2-1.SNP.10:22948079 chr10:022948079 0 W/22948079-22948079 FN_789-2-1 Single Base Substitution C-A Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN2678-S.SNP.10:22949865 chr10:022949865 0 W/22949865-22949865 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.636554;DP=4458;DP4=2164,2056,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.06485e-08;MQSB=0.913238;RPB=0.71516;SGB=21.6694;VDB=0.981311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T99M|419|LOC_Os10g42570|protein_coding|CODING|LOC_Os10g42570.1|1|1) FN-361.SNP.10:22951632 chr10:022951632 0 W/22951632-22951632 FN-361 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN2146-S.SNP.10:22955819 chr10:022955819 0 W/22955819-22955819 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.179596;DP=2753;DP4=1238,1476,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.36927e-06;MQSB=0.993698;RPB=0.985575;SGB=27.0464;VDB=0.950754;EFF=INTERGENIC(MODIFIER||||||||||1) FN-277.SNP.10:22967845 chr10:022967845 0 W/22967845-22967845 FN-277 Single Base Substitution G-A INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3459-S.SNP.10:22973803 chr10:022973803 0 W/22973803-22973803 FN3459-S SNP G -> A AC=1;AN=184;BQB=0.943964;DP=2884;DP4=1554,1181,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5226e-07;MQSB=0.991647;RPB=0.936209;SGB=23.2751;VDB=0.440196;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.10:22974155 chr10:022974155 0 W/22974155-22974155 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.976934;DP=2832;DP4=1159,1602,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.93177e-06;MQSB=0.991914;RPB=0.798605;SGB=21.6609;VDB=0.0496804;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.10:22974751 chr10:022974751 0 W/22974751-22974751 FN591-S Single Base Substitution T-A INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN4230-S.SNP.10:22999716 chr10:022999716 0 W/22999716-22999716 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.531289;DP=2419;DP4=1233,1118,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.43713e-05;MQSB=0.968802;RPB=0.958813;SGB=43.4296;VDB=0.878088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.10:23000162 chr10:023000162 0 W/23000162-23000162 FN3800-S SNP A -> G AC=1;AN=190;BQB=0.938578;DP=2654;DP4=1366,1205,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94865e-07;MQSB=0.804595;RPB=0.822901;SGB=28.9929;VDB=0.868938;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.10:23004497 chr10:023004497 0 W/23004497-23004497 FN756-S Single Base Substitution G-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2549-S.SNP.10:23010525 chr10:023010525 0 W/23010525-23010525 FN2549-S SNP C -> T AC=2;AN=198;BQB=0.389392;DP=4253;DP4=1888,2099,3,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.2756e-08;MQSB=0.922183;RPB=0.917417;SGB=54.144;VDB=0.941638;EFF=INTRON(MODIFIER||||323|LOC_Os10g42670|protein_coding|CODING|LOC_Os10g42670.1|2|1) FN4052-S.SNP.10:23012732 chr10:023012732 0 W/23012732-23012732 FN4052-S SNP T -> A AC=2;AN=168;BQB=0.997817;DP=2118;DP4=1090,936,17,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.80159e-18;MQSB=0.87918;RPB=0.935238;SGB=136.358;VDB=0.205488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.10:23012800 chr10:023012800 0 W/23012800-23012800 FN2658-S SNP G -> T AC=1;AN=200;BQB=0.920233;DP=4974;DP4=2047,2623,14,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.34464e-17;MQSB=0.993587;RPB=0.0222264;SGB=65.9573;VDB=0.0631691;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.10:23018061 chr10:023018061 0 W/23018061-23018061 FN2232-S SNP A -> G AC=1;AN=190;BQB=0.401119;DP=3919;DP4=2101,1614,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01446e-09;MQSB=0.99935;RPB=0.255181;SGB=5.66499;VDB=0.548672;EFF=INTERGENIC(MODIFIER||||||||||1) FN-362.SNP.10:23018680 chr10:023018680 0 W/23018680-23018680 FN-362 Single Base Substitution G-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1622-S.SNP.10:23031584 chr10:023031584 0 W/23031584-23031584 FN1622-S Single Base Substitution A-G UTR_3_PRIME Homo SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2784-S.SNP.10:23034384 chr10:023034384 0 W/23034384-23034384 FN2784-S SNP A -> T AC=2;AN=198;BQB=0.860225;DP=4157;DP4=1948,1904,37,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.49224e-37;MQSB=0.806576;RPB=0.620986;SGB=176.253;VDB=0.0491485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K310M|375|LOC_Os10g42700|protein_coding|CODING|LOC_Os10g42700.1|7|1) FN2492.SNP.10:23035404 chr10:023035404 0 W/23035404-23035404 FN2492 SNP T -> A AC=1;AN=200;BQB=0.917126;DP=5077;DP4=2254,2450,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22569e-14;MQSB=0.642477;RPB=0.547726;SGB=79.9264;VDB=0.910581;EFF=UTR_3_PRIME(MODIFIER||274||591|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.1|7|1),UTR_3_PRIME(MODIFIER||1064||542|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.2|6|1),UTR_3_PRIME(MODIFIER||1064||512|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.3|7|1),UTR_3_PRIME(MODIFIER||1001||499|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.4|7|1),UTR_3_PRIME(MODIFIER||1131||497|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.5|7|1),UTR_3_PRIME(MODIFIER||1965||375|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.7|5|1),UTR_3_PRIME(MODIFIER||1131||497|LOC_Os10g42710|protein_coding|CODING|LOC_Os10g42710.6|6|1) FN751-S.SNP.10:23044567 chr10:023044567 0 W/23044567-23044567 FN751-S Single Base Substitution T-G INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2655-S.SNP.10:23052172 chr10:023052172 0 W/23052172-23052172 FN2655-S SNP A -> G AC=1;AN=200;BQB=0.899662;DP=4839;DP4=2519,2136,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95499e-12;MQSB=0.979056;RPB=0.51942;SGB=14.3054;VDB=0.676418;EFF=START_GAINED(LOW||||387|LOC_Os10g42724|protein_coding|CODING|LOC_Os10g42724.1|1|1),UTR_5_PRIME(MODIFIER||804||387|LOC_Os10g42724|protein_coding|CODING|LOC_Os10g42724.1|1|1) FN815-S.SNP.10:23052647 chr10:023052647 0 W/23052647-23052647 FN815-S Single Base Substitution C-G INTRON HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1278-S.SNP.10:23053497 chr10:023053497 0 W/23053497-23053497 FN1278-S Single Base Substitution A-T SPLICE_SITE_REGION HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1278-S.SNP.10:23053498 chr10:023053498 0 W/23053498-23053498 FN1278-S Single Base Substitution C-A SPLICE_SITE_REGION HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN425-S.SNP.10:23057660 chr10:023057660 0 W/23057660-23057660 FN425-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN-141.SNP.10:23063935 chr10:023063935 0 W/23063935-23063935 FN-141 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN723-S.SNP.10:23067577 chr10:023067577 0 W/23067577-23067577 FN723-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g42754 expressed protein SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1517-S.SNP.10:23072495 chr10:023072495 0 W/23072495-23072495 FN1517-S Single Base Substitution C-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN3879-S.SNP.10:23081693 chr10:023081693 0 W/23081693-23081693 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.519303;DP=2296;DP4=1088,1090,12,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.87977e-08;MQSB=0.93258;RPB=0.19955;SGB=50.9207;VDB=0.532093;EFF=INTRON(MODIFIER||||289|LOC_Os10g42790|protein_coding|CODING|LOC_Os10g42790.1|1|1) FN4202-S.SNP.10:23084333 chr10:023084333 0 W/23084333-23084333 FN4202-S SNP A -> T AC=1;AN=170;BQB=0.997899;DP=2512;DP4=1272,1126,17,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000398089;MQB=8.09938e-18;MQSB=0.997922;RPB=0.638774;SGB=54.081;VDB=0.566834;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D445E|564|LOC_Os10g42800|protein_coding|CODING|LOC_Os10g42800.1|3|1) FN1011-S.SNP.10:23089656 chr10:023089656 0 W/23089656-23089656 FN1011-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os10g42820 early-responsive to dehydration protein-related, putative, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN-64.SNP.10:23090223 chr10:023090223 0 W/23090223-23090223 FN-64 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os10g42820 early-responsive to dehydration protein-related, putative, expressed SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN410-S.SNP.10:23094139 chr10:023094139 0 W/23094139-23094139 FN410-S Single Base Substitution C-T INTERGENIC HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN1450-S.SNP.10:23095729 chr10:023095729 0 W/23095729-23095729 FN1450-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os10g42830 transporter family protein, putative, expressed SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN4182-S.SNP.10:23096205 chr10:023096205 0 W/23096205-23096205 FN4182-S SNP C -> T AC=1;AN=170;BQB=0.980474;DP=2507;DP4=1290,1152,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.78245e-05;MQSB=0.936114;RPB=0.633836;SGB=25.6601;VDB=0.337267;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V401|502|LOC_Os10g42830|protein_coding|CODING|LOC_Os10g42830.1|12|1) FN3536-S.SNP.10:23098284 chr10:023098284 0 W/23098284-23098284 FN3536-S SNP G -> C AC=1;AN=188;BQB=0.980401;DP=2776;DP4=1419,1289,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8124e-07;MQSB=0.988475;RPB=0.755458;SGB=28.8977;VDB=0.534701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I223M|502|LOC_Os10g42830|protein_coding|CODING|LOC_Os10g42830.1|8|1) FN2691-S.SNP.10:23098655 chr10:023098655 0 W/23098655-23098655 FN2691-S SNP A -> G AC=1;AN=200;BQB=0.669132;DP=4957;DP4=2341,2386,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01147e-11;MQSB=0.926023;RPB=0.999001;SGB=12.7003;VDB=0.681863;EFF=INTRON(MODIFIER||||502|LOC_Os10g42830|protein_coding|CODING|LOC_Os10g42830.1|6|1) FN2333.SNP.10:23100089 chr10:023100089 0 W/23100089-23100089 FN2333 SNP G -> A AC=1;AN=192;BQB=0.844663;DP=4889;DP4=1917,2404,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000204541;MQB=2.00741e-16;MQSB=0.000562824;RPB=0.133386;SGB=-80.293;VDB=0.526332;EFF=INTERGENIC(MODIFIER||||||||||1) W276-2-1.SNP.10:23108305 chr10:023108305 0 W/23108305-23108305 W276-2-1 Single Base Substitution C-T STOP_GAINED HOMO LOC_Os10g42850 WRKY2, expressed SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. W276-2-1.SNP.10:23108307 chr10:023108307 0 W/23108307-23108307 W276-2-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g42850 WRKY2, expressed SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3935-S.SNP.10:23111831 chr10:023111831 0 W/23111831-23111831 FN3935-S SNP C -> T AC=2;AN=158;BQB=0.987121;DP=2530;DP4=1194,1200,19,19;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.50391e-23;MQSB=0.997271;RPB=0.961685;SGB=118.31;VDB=0.431805;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.10:23116182 chr10:023116182 0 W/23116182-23116182 FN801-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os10g42870 peptide transporter PTR2, putative, expressed SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN801-S.SNP.10:23116183 chr10:023116183 0 W/23116183-23116183 FN801-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1520-S.SNP.10:23136211 chr10:023136211 0 W/23136211-23136211 FN1520-S Single Base Substitution G-A INTRON HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN866-S.SNP.10:23141948 chr10:023141948 0 W/23141948-23141948 FN866-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN3763-S.SNP.10:23146074 chr10:023146074 0 W/23146074-23146074 FN3763-S SNP T -> C AC=1;AN=190;BQB=0.985606;DP=2705;DP4=1360,1215,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50919e-09;MQSB=0.798484;RPB=0.98846;SGB=58.2031;VDB=0.112672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.10:23151971 chr10:023151971 0 W/23151971-23151971 FN4258-S SNP T -> C AC=1;AN=170;BQB=0.509034;DP=2563;DP4=1194,1328,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.0071156;MQSB=0.919987;RPB=0.675159;SGB=25.6601;VDB=0.898965;EFF=INTRON(MODIFIER||||475|LOC_Os10g42950|protein_coding|CODING|LOC_Os10g42950.1|5|1),INTRON(MODIFIER||||422|LOC_Os10g42950|protein_coding|CODING|LOC_Os10g42950.2|5|1),INTRON(MODIFIER||||374|LOC_Os10g42950|protein_coding|CODING|LOC_Os10g42950.3|4|1),INTRON(MODIFIER||||346|LOC_Os10g42950|protein_coding|CODING|LOC_Os10g42950.4|5|1),INTRON(MODIFIER||||260|LOC_Os10g42950|protein_coding|CODING|LOC_Os10g42950.5|5|1) FN3840-S.SNP.10:23167207 chr10:023167207 0 W/23167207-23167207 FN3840-S SNP G -> A AC=1;AN=190;BQB=0.390783;DP=2135;DP4=742,1290,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=24;MQ0F=0.237002;MQB=0.569652;MQSB=5.96126e-26;RPB=0.682121;SGB=53.8699;VDB=0.296913;EFF=INTRON(MODIFIER||||284|LOC_Os10g42980|protein_coding|CODING|LOC_Os10g42980.1|1|1) FN2281.SNP.10:23168800 chr10:023168800 0 W/23168800-23168800 FN2281 SNP C -> T AC=1;AN=192;BQB=0.999951;DP=5005;DP4=2240,2471,8,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.35455e-10;MQSB=0.0291733;RPB=0.36916;SGB=99.4183;VDB=0.161919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.10:23173126 chr10:023173126 0 W/23173126-23173126 FN2164-S SNP C -> T AC=1;AN=168;BQB=0.0912722;DP=2855;DP4=1404,1412,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=8.71063e-05;MQSB=0.812141;RPB=0.996695;SGB=-40.0741;VDB=0.73345;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1057V|1658|LOC_Os10g42999|protein_coding|CODING|LOC_Os10g42999.1|4|1) FN2649-S.SNP.10:23174384 chr10:023174384 0 W/23174384-23174384 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.872863;DP=4535;DP4=2239,2077,10,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95903e-14;MQSB=0.32563;RPB=0.926525;SGB=31.9623;VDB=0.440105;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A1476|1658|LOC_Os10g42999|protein_coding|CODING|LOC_Os10g42999.1|4|1) FN-219.SNP.10:23174808 chr10:023174808 0 W/23174808-23174808 FN-219 Single Base Substitution G-A INTRON HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN2480.SNP.10:23181305 chr10:023181305 0 W/23181305-23181305 FN2480 SNP T -> A AC=1;AN=200;BQB=0.982098;DP=4478;DP4=1998,2150,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000669942;MQB=1.0236e-12;MQSB=0.992541;RPB=0.823169;SGB=42.5108;VDB=0.0469223;EFF=INTRON(MODIFIER||||540|LOC_Os10g43020|protein_coding|CODING|LOC_Os10g43020.1|1|1) FN2481.SNP.10:23184663 chr10:023184663 0 W/23184663-23184663 FN2481 SNP C -> G AC=2;AN=200;BQB=0.88527;DP=4036;DP4=1432,2305,12,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.23737e-15;MQSB=0.820751;RPB=0.959177;SGB=127.947;VDB=0.741125;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.10:23184866 chr10:023184866 0 W/23184866-23184866 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.63692;DP=4579;DP4=2433,1918,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.87943e-13;MQSB=0.860704;RPB=0.86161;SGB=39.9056;VDB=0.761194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.10:23185776 chr10:023185776 0 W/23185776-23185776 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.88597;DP=4886;DP4=2508,2140,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.85466e-14;MQSB=0.974038;RPB=0.0458548;SGB=79.9264;VDB=0.125647;EFF=INTRON(MODIFIER||||117|LOC_Os10g43030|protein_coding|CODING|LOC_Os10g43030.1|1|1) FN723-S.SNP.10:23187781 chr10:023187781 0 W/23187781-23187781 FN723-S Single Base Substitution C-T INTRON HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN-396.SNP.10:23197687 chr10:023197687 0 W/23197687-23197687 FN-396 Single Base Substitution T-A INTRON HOMO SNo: 382, Mutant_ID: FN-396, Generation: M2, Mutations: 36, Genes: 8, Seed availability: No. FN1117-S.SNP.10:23205988 chr10:023205988 0 W/23205988-23205988 FN1117-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN692-S.SNP.11:133525 chr11:000133525 0 W/133525-133525 FN692-S Single Base Substitution T-C INTRON HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN3396-S.SNP.11:134533 chr11:000134533 0 W/134533-134533 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.96294;DP=2705;DP4=1344,1224,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000369686;MQB=1.63142e-05;MQSB=6.4577e-05;RPB=0.763455;SGB=62.3078;VDB=0.293026;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.11:135060 chr11:000135060 0 W/135060-135060 FN1018-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2600-S.SNP.11:136163 chr11:000136163 0 W/136163-136163 FN2600-S SNP G -> T AC=1;AN=198;BQB=0.992254;DP=3241;DP4=1556,1276,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000605324;MQSB=0.973868;RPB=0.963388;SGB=9.3494;VDB=0.702466;EFF=INTERGENIC(MODIFIER||||||||||1) FN1120-S.SNP.11:136679 chr11:000136679 0 W/136679-136679 FN1120-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g01240 IBR domain containing protein, expressed SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2258-S.SNP.11:154221 chr11:000154221 0 W/154221-154221 FN2258-S SNP C -> T AC=1;AN=190;BQB=0.972007;DP=4959;DP4=2218,2441,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.85713e-12;MQSB=0.658281;RPB=0.96158;SGB=76.4186;VDB=0.284648;EFF=INTRON(MODIFIER||||155|LOC_Os11g01280|protein_coding|CODING|LOC_Os11g01280.1|1|1) FN2258-S.SNP.11:154223 chr11:000154223 0 W/154223-154223 FN2258-S SNP G -> T AC=1;AN=190;BQB=0.995741;DP=4990;DP4=2203,2427,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.73643e-12;MQSB=0.614125;RPB=0.801619;SGB=36.4291;VDB=0.527285;EFF=INTRON(MODIFIER||||155|LOC_Os11g01280|protein_coding|CODING|LOC_Os11g01280.1|1|1) FN1674-S.SNP.11:158192 chr11:000158192 0 W/158192-158192 FN1674-S SNP T -> G AC=1;AN=188;BQB=0.176746;DP=3169;DP4=1769,1373,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000182493;MQSB=0.918759;RPB=0.923626;SGB=-34.1676;VDB=0.208747;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.11:161374 chr11:000161374 0 W/161374-161374 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.353967;DP=4820;DP4=2355,2219,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47259e-12;MQSB=0.589704;RPB=0.156713;SGB=38.983;VDB=0.363013;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.11:167808 chr11:000167808 0 W/167808-167808 FN771-S Single Base Substitution G-A INTERGENIC HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN-73.SNP.11:168192 chr11:000168192 0 W/168192-168192 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN-329.SNP.11:170752 chr11:000170752 0 W/170752-170752 FN-329 Single Base Substitution G-A INTERGENIC HET SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN230-S.SNP.11:186303 chr11:000186303 0 W/186303-186303 FN230-S Single Base Substitution C-G INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3490-S.SNP.11:186513 chr11:000186513 0 W/186513-186513 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.958256;DP=2685;DP4=944,1632,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.66599e-07;MQSB=0.995296;RPB=0.966884;SGB=49.835;VDB=0.653299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.11:191158 chr11:000191158 0 W/191158-191158 FN2719-S SNP C -> T AC=1;AN=200;BQB=0.978445;DP=4490;DP4=1981,2272,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.0984e-10;MQSB=0.925522;RPB=0.65322;SGB=29.4849;VDB=0.0990372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.11:195124 chr11:000195124 0 W/195124-195124 FN3886-S SNP C -> T AC=2;AN=158;BQB=0.999906;DP=2660;DP4=1379,1174,11,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.47076e-09;MQSB=0.821516;RPB=0.87344;SGB=35.6659;VDB=0.512494;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A248|1131|LOC_Os11g01330|protein_coding|CODING|LOC_Os11g01330.1|1|1) FN-81.SNP.11:196858 chr11:000196858 0 W/196858-196858 FN-81 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g01330 expressed protein SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN-81.SNP.11:196859 chr11:000196859 0 W/196859-196859 FN-81 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN3374-S.SNP.11:197038 chr11:000197038 0 W/197038-197038 FN3374-S SNP G -> C AC=1;AN=184;BQB=0.866079;DP=3051;DP4=1291,1603,15,10;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0222878;MQB=0.000889325;MQSB=3.85457e-06;RPB=0.820048;SGB=-10.5397;VDB=0.37464;EFF=INTRON(MODIFIER||||1131|LOC_Os11g01330|protein_coding|CODING|LOC_Os11g01330.1|2|1) FN2582-S.SNP.11:210975 chr11:000210975 0 W/210975-210975 FN2582-S SNP A -> T AC=1;AN=198;BQB=0.806015;DP=4188;DP4=2113,1876,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.59474e-07;MQSB=0.474814;RPB=0.976864;SGB=49.5489;VDB=0.624755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.11:214474 chr11:000214474 0 W/214474-214474 FN2083-S SNP A -> G AC=1;AN=168;BQB=0.247179;DP=3714;DP4=1697,1788,13,175;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00592353;MQB=0;MQSB=0.000132652;RPB=7.22154e-19;SGB=-2595.05;VDB=0.0182983;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.11:215275 chr11:000215275 0 W/215275-215275 FN1399-S Single Base Substitution G-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2279-S.SNP.11:217467 chr11:000217467 0 W/217467-217467 FN2279-S SNP T -> C AC=1;AN=190;BQB=0.78445;DP=5137;DP4=2443,2381,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66364e-12;MQSB=0.9411;RPB=0.992613;SGB=85.5263;VDB=0.893344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.11:219143 chr11:000219143 0 W/219143-219143 FN3777-S SNP G -> A AC=1;AN=190;BQB=0.918012;DP=2320;DP4=908,1322,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29752e-07;MQSB=0.937254;RPB=0.947438;SGB=44.5415;VDB=0.181116;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.11:220584 chr11:000220584 0 W/220584-220584 FN1232-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-155.SNP.11:224132 chr11:000224132 0 W/224132-224132 FN-155 Single Base Substitution G-C INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN-155.SNP.11:224136 chr11:000224136 0 W/224136-224136 FN-155 Single Base Substitution G-A INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN3056-S.SNP.11:227313 chr11:000227313 0 W/227313-227313 FN3056-S SNP C -> A AC=2;AN=184;BQB=0.960448;DP=2745;DP4=1582,1035,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.90074e-12;MQSB=0.360594;RPB=0.415168;SGB=112.047;VDB=0.883085;EFF=UTR_5_PRIME(MODIFIER||144||476|LOC_Os11g01370|protein_coding|CODING|LOC_Os11g01370.1|1|1) FN-175.SNP.11:231642 chr11:000231642 0 W/231642-231642 FN-175 Single Base Substitution A-G UTR_3_PRIME HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN3492-S.SNP.11:236114 chr11:000236114 0 W/236114-236114 FN3492-S SNP C -> T AC=2;AN=184;BQB=0.9841;DP=2589;DP4=1253,1247,14,17;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.144457;MQB=0.658271;MQSB=0.643897;RPB=0.839931;SGB=99.14;VDB=0.961799;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R163*|1708|LOC_Os11g01380|protein_coding|CODING|LOC_Os11g01380.1|5|1);LOF=(LOC_Os11g01380|LOC_Os11g01380|1|1.00);NMD=(LOC_Os11g01380|LOC_Os11g01380|1|1.00) FN-273.SNP.11:241126 chr11:000241126 0 W/241126-241126 FN-273 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g01380 clathrin heavy chain, putative, expressed SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3695-S.SNP.11:242094 chr11:000242094 0 W/242094-242094 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.995868;DP=2830;DP4=1480,1230,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.10636;MQB=0.0538623;MQSB=0;RPB=0.990862;SGB=50.3161;VDB=0.932111;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1308R|1708|LOC_Os11g01380|protein_coding|CODING|LOC_Os11g01380.1|25|1) FN3695-S.SNP.11:242097 chr11:000242097 0 W/242097-242097 FN3695-S SNP T -> C AC=1;AN=190;BQB=1;DP=2826;DP4=1484,1254,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.112527;MQB=0.0233262;MQSB=0;RPB=0.941766;SGB=62.7569;VDB=0.818589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Cgt|C1309R|1708|LOC_Os11g01380|protein_coding|CODING|LOC_Os11g01380.1|25|1) FN2594-S.SNP.11:247854 chr11:000247854 0 W/247854-247854 FN2594-S SNP C -> A AC=1;AN=198;BQB=0.785161;DP=3163;DP4=1369,1363,11,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000316156;MQB=0.000149593;MQSB=0.00299054;RPB=0.992789;SGB=21.559;VDB=0.33346;EFF=INTRON(MODIFIER||||295|LOC_Os11g01400|protein_coding|CODING|LOC_Os11g01400.1|1|1) FN1276-S.SNP.11:251587 chr11:000251587 0 W/251587-251587 FN1276-S Single Base Substitution C-T STOP_GAINED HET LOC_Os11g01410 ammonium transporter protein, putative, expressed SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3759-S.SNP.11:257538 chr11:000257538 0 W/257538-257538 FN3759-S SNP C -> A AC=2;AN=190;BQB=0.988231;DP=2670;DP4=1320,1246,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.29903e-16;MQSB=0.849123;RPB=0.933874;SGB=117.403;VDB=0.920169;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G844V|930|LOC_Os11g01439|protein_coding|CODING|LOC_Os11g01439.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G776V|862|LOC_Os11g01439|protein_coding|CODING|LOC_Os11g01439.2|6|1) FN3759-S.SNP.11:257539 chr11:000257539 0 W/257539-257539 FN3759-S SNP C -> A AC=2;AN=190;BQB=0.893118;DP=2666;DP4=1313,1254,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.7684e-17;MQSB=0.889594;RPB=0.935413;SGB=112.85;VDB=0.935355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G844C|930|LOC_Os11g01439|protein_coding|CODING|LOC_Os11g01439.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G776C|862|LOC_Os11g01439|protein_coding|CODING|LOC_Os11g01439.2|6|1) FN2217-S.SNP.11:268355 chr11:000268355 0 W/268355-268355 FN2217-S SNP G -> T AC=2;AN=190;BQB=0.18997;DP=4873;DP4=2046,2539,17,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000410425;MQB=3.2425e-15;MQSB=0.995816;RPB=0.767709;SGB=-6.57546;VDB=0.431968;EFF=INTERGENIC(MODIFIER||||||||||1) FN867-S.SNP.11:268828 chr11:000268828 0 W/268828-268828 FN867-S Single Base Substitution A-C INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN1557-S.SNP.11:275532 chr11:000275532 0 W/275532-275532 FN1557-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g01470 retrotransposon protein, putative, unclassified, expressed SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2269-S.SNP.11:284249 chr11:000284249 0 W/284249-284249 FN2269-S SNP T -> A AC=1;AN=190;BQB=0.81796;DP=5075;DP4=2317,2438,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70247e-11;MQSB=0.71165;RPB=0.867526;SGB=80.9724;VDB=0.13755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.11:288721 chr11:000288721 0 W/288721-288721 FN2444 SNP A -> G AC=1;AN=200;BQB=0.847505;DP=4814;DP4=2285,2231,14,14;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0583714;MQB=0.286416;MQSB=0;RPB=0.930792;SGB=58.1418;VDB=0.644332;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S267P|520|LOC_Os11g01490|protein_coding|CODING|LOC_Os11g01490.1|7|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Ccc|S267P|497|LOC_Os11g01490|protein_coding|CODING|LOC_Os11g01490.2|6|1) FN2537-S.SNP.11:292861 chr11:000292861 0 W/292861-292861 FN2537-S SNP A -> C AC=1;AN=198;BQB=0.930007;DP=4199;DP4=2110,1909,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.69133e-05;MQSB=0.803255;RPB=0.971855;SGB=31.1689;VDB=0.308129;EFF=UTR_5_PRIME(MODIFIER||2707||520|LOC_Os11g01490|protein_coding|CODING|LOC_Os11g01490.1|3|1),UTR_5_PRIME(MODIFIER||2707||497|LOC_Os11g01490|protein_coding|CODING|LOC_Os11g01490.2|3|1) FN3366-S.SNP.11:295256 chr11:000295256 0 W/295256-295256 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.991838;DP=2999;DP4=1458,1438,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=35;MQ0F=0.21007;MQB=0.683198;MQSB=0;RPB=0.999963;SGB=20.7533;VDB=0.25684;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.11:301323 chr11:000301323 0 W/301323-301323 FN2379 SNP G -> A AC=1;AN=192;BQB=0.159107;DP=4421;DP4=2233,1884,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000226193;MQB=5.17941e-12;MQSB=0.0665284;RPB=0.98304;SGB=81.1609;VDB=0.68533;EFF=UTR_5_PRIME(MODIFIER||36||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.1|2|1),UTR_5_PRIME(MODIFIER||36||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.3|2|1),UTR_5_PRIME(MODIFIER||36||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.2|1|1) FN2379.SNP.11:301327 chr11:000301327 0 W/301327-301327 FN2379 SNP C -> A AC=1;AN=192;BQB=0.071353;DP=4361;DP4=2098,1776,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000229305;MQB=1.34606e-11;MQSB=0.0336041;RPB=0.677712;SGB=12.0478;VDB=0.733113;EFF=UTR_5_PRIME(MODIFIER||40||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.1|2|1),UTR_5_PRIME(MODIFIER||40||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.3|2|1),UTR_5_PRIME(MODIFIER||40||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.2|1|1) FN2379.SNP.11:301342 chr11:000301342 0 W/301342-301342 FN2379 SNP G -> C AC=1;AN=192;BQB=0.0642598;DP=4330;DP4=2228,1837,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000230947;MQB=1.35301e-10;MQSB=0.064291;RPB=0.994792;SGB=64.7304;VDB=0.723978;EFF=UTR_5_PRIME(MODIFIER||55||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.1|2|1),UTR_5_PRIME(MODIFIER||55||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.3|2|1),UTR_5_PRIME(MODIFIER||55||1048|LOC_Os11g01510|protein_coding|CODING|LOC_Os11g01510.2|1|1) FN-296.SNP.11:303376 chr11:000303376 0 W/303376-303376 FN-296 Single Base Substitution C-A INTERGENIC HOMO SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN2280-S.SNP.11:311440 chr11:000311440 0 W/311440-311440 FN2280-S SNP T -> G AC=1;AN=190;BQB=0.99908;DP=4689;DP4=2261,2133,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27743e-12;MQSB=0.252572;RPB=0.320935;SGB=64.5316;VDB=0.316262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.11:316664 chr11:000316664 0 W/316664-316664 FN1572-S Single Base Substitution C-T INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN322-S.SNP.11:320383 chr11:000320383 0 W/320383-320383 FN322-S Single Base Substitution T-C INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN_N1-26-1.SNP.11:321637 chr11:000321637 0 W/321637-321637 FN_N1-26-1 Single Base Substitution G-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN4305-S.SNP.11:321677 chr11:000321677 0 W/321677-321677 FN4305-S SNP A -> T AC=1;AN=170;BQB=0.576798;DP=2822;DP4=1292,1312,12,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.83165e-10;MQSB=0.893183;RPB=0.99999;SGB=11.5457;VDB=0.000458102;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.11:332935 chr11:000332935 0 W/332935-332935 FN1075-S Single Base Substitution T-A INTERGENIC HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN4083-S.SNP.11:333365 chr11:000333365 0 W/333365-333365 FN4083-S SNP T -> C AC=1;AN=182;BQB=0.81255;DP=3026;DP4=1695,1051,21,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.18202e-12;MQSB=0.673748;RPB=0.887495;SGB=-75.7253;VDB=0.620273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.11:341418 chr11:000341418 0 W/341418-341418 FN1537-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2081-S.SNP.11:356534 chr11:000356534 0 W/356534-356534 FN2081-S SNP G -> A AC=1;AN=168;BQB=0.433519;DP=2564;DP4=416,2109,3,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.81737e-05;MQSB=0.401793;RPB=0.237284;SGB=-16.665;VDB=0.191012;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.11:358812 chr11:000358812 0 W/358812-358812 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.546107;DP=4960;DP4=2510,1991,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.73391e-06;MQSB=0.813227;RPB=0.799611;SGB=-0.550503;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.11:367989 chr11:000367989 0 W/367989-367989 FN3372-S SNP C -> A AC=1;AN=184;BQB=0.816608;DP=3627;DP4=2216,1241,14,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00220568;MQB=1.64353e-05;MQSB=1.36174e-10;RPB=0.608254;SGB=30.8405;VDB=0.587808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.11:372926 chr11:000372926 0 W/372926-372926 FN2268-S SNP C -> A AC=2;AN=190;BQB=0.999613;DP=3811;DP4=1801,1763,13,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.29002e-18;MQSB=0.270338;RPB=0.765455;SGB=131.065;VDB=0.943629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S83I|364|LOC_Os11g01670|protein_coding|CODING|LOC_Os11g01670.1|2|1) FN2268-S.SNP.11:372927 chr11:000372927 0 W/372927-372927 FN2268-S SNP T -> A AC=2;AN=190;BQB=0.980685;DP=3815;DP4=1640,1598,11,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33083e-14;MQSB=0.426139;RPB=0.439583;SGB=-7.12933;VDB=0.902217;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Tgc|S83C|364|LOC_Os11g01670|protein_coding|CODING|LOC_Os11g01670.1|2|1) FN1638-S.SNP.11:378053 chr11:000378053 0 W/378053-378053 FN1638-S Single Base Substitution G-A INTERGENIC Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3481-S.SNP.11:386927 chr11:000386927 0 W/386927-386927 FN3481-S SNP A -> T AC=1;AN=184;BQB=0.690361;DP=3786;DP4=1550,2080,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04449e-10;MQSB=0.996845;RPB=0.163075;SGB=74.4875;VDB=0.698618;EFF=INTRON(MODIFIER||||354|LOC_Os11g01720|protein_coding|CODING|LOC_Os11g01720.1|1|1) FN1550-S.SNP.11:393157 chr11:000393157 0 W/393157-393157 FN1550-S Single Base Substitution T-C INTRON Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1586-S.SNP.11:393436 chr11:000393436 0 W/393436-393436 FN1586-S Single Base Substitution T-A INTRON HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2784-S.SNP.11:395468 chr11:000395468 0 W/395468-395468 FN2784-S SNP T -> A AC=1;AN=198;BQB=0.541201;DP=4249;DP4=2055,2013,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.8265e-16;MQSB=0.203564;RPB=0.698498;SGB=94.0758;VDB=0.157926;EFF=INTRON(MODIFIER||||567|LOC_Os11g01730|protein_coding|CODING|LOC_Os11g01730.1|2|1) FN622-S.SNP.11:404030 chr11:000404030 0 W/404030-404030 FN622-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN-372.SNP.11:404189 chr11:000404189 0 W/404189-404189 FN-372 Single Base Substitution G-T INTRON HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN421-S.SNP.11:408027 chr11:000408027 0 W/408027-408027 FN421-S Single Base Substitution T-C INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1348-S.SNP.11:409579 chr11:000409579 0 W/409579-409579 FN1348-S Single Base Substitution C-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3784-S.SNP.11:411549 chr11:000411549 0 W/411549-411549 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.8227;DP=2784;DP4=1398,1188,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000144616;MQSB=0.961644;RPB=0.96902;SGB=25.439;VDB=0.974255;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.11:413555 chr11:000413555 0 W/413555-413555 FN3356-S SNP A -> T AC=1;AN=184;BQB=0.790491;DP=3492;DP4=1741,1635,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.03208e-09;MQSB=0.626082;RPB=0.999986;SGB=57.786;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) W247-2-1.SNP.11:421475 chr11:000421475 0 W/421475-421475 W247-2-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN322-S.SNP.11:432099 chr11:000432099 0 W/432099-432099 FN322-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN2650-S.SNP.11:434957 chr11:000434957 0 W/434957-434957 FN2650-S SNP G -> C AC=2;AN=200;BQB=0.977385;DP=4747;DP4=2175,2241,24,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.83503e-21;MQSB=0.926052;RPB=0.789247;SGB=130.399;VDB=0.180974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.11:434960 chr11:000434960 0 W/434960-434960 FN2650-S SNP C -> A AC=2;AN=200;BQB=0.994429;DP=4744;DP4=2255,2225,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.78062e-24;MQSB=0.786171;RPB=0.890605;SGB=130.399;VDB=0.167825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.11:454586 chr11:000454586 0 W/454586-454586 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.97336;DP=3144;DP4=1818,1266,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.81834e-07;MQSB=0.502444;RPB=0.826133;SGB=44.2207;VDB=0.396784;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.11:456124 chr11:000456124 0 W/456124-456124 FN443-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g01860 pentatricopeptide, putative, expressed SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN2546-S.SNP.11:462741 chr11:000462741 0 W/462741-462741 FN2546-S SNP A -> G AC=1;AN=198;BQB=0.983287;DP=4018;DP4=1998,1774,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00647088;MQB=8.8215e-06;MQSB=1.15677e-05;RPB=0.656531;SGB=21.559;VDB=0.162373;EFF=INTERGENIC(MODIFIER||||||||||1) FN2110-S.SNP.11:464424 chr11:000464424 0 W/464424-464424 FN2110-S SNP A -> C AC=1;AN=168;BQB=0.868986;DP=3875;DP4=2255,1581,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00490323;MQB=2.28605e-10;MQSB=0.210343;RPB=0.968576;SGB=11.3448;VDB=0.14881;EFF=INTRON(MODIFIER||||1218|LOC_Os11g01872|protein_coding|CODING|LOC_Os11g01872.1|19|1) FN3851-S.SNP.11:482412 chr11:000482412 0 W/482412-482412 FN3851-S SNP A -> G AC=1;AN=158;BQB=0.8936;DP=2601;DP4=1263,1252,12,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.55148e-08;MQSB=0.969559;RPB=0.966578;SGB=40.8124;VDB=0.923739;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F195|324|LOC_Os11g01880|protein_coding|CODING|LOC_Os11g01880.1|7|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F195|250|LOC_Os11g01880|protein_coding|CODING|LOC_Os11g01880.2|7|1) FN1586-S.SNP.11:488269 chr11:000488269 0 W/488269-488269 FN1586-S Single Base Substitution C-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN3983-S.SNP.11:496347 chr11:000496347 0 W/496347-496347 FN3983-S SNP G -> C AC=1;AN=168;BQB=0.999218;DP=3020;DP4=1338,1553,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0821192;MQB=0.95408;MQSB=1.78761e-12;RPB=0.745938;SGB=92.0501;VDB=0.212995;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G958R|1981|LOC_Os11g01920|protein_coding|CODING|LOC_Os11g01920.1|2|1) FN3476-S.SNP.11:496574 chr11:000496574 0 W/496574-496574 FN3476-S SNP C -> T AC=2;AN=184;BQB=0.914695;DP=3432;DP4=1659,1667,16,22;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0483683;MQB=5.55911e-11;MQSB=5.20317e-10;RPB=0.905033;SGB=123.793;VDB=0.0647268;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A1033|1981|LOC_Os11g01920|protein_coding|CODING|LOC_Os11g01920.1|2|1) FN3476-S.SNP.11:496575 chr11:000496575 0 W/496575-496575 FN3476-S SNP C -> T AC=2;AN=184;BQB=0.993558;DP=3448;DP4=1682,1667,17,21;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0.0478538;MQB=8.5359e-11;MQSB=4.54923e-10;RPB=0.991067;SGB=166.309;VDB=0.160038;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R1034*|1981|LOC_Os11g01920|protein_coding|CODING|LOC_Os11g01920.1|2|1);LOF=(LOC_Os11g01920|LOC_Os11g01920|1|1.00);NMD=(LOC_Os11g01920|LOC_Os11g01920|1|1.00) FN1288-S.SNP.11:500243 chr11:000500243 0 W/500243-500243 FN1288-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN-173.SNP.11:500450 chr11:000500450 0 W/500450-500450 FN-173 Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN4083-S.SNP.11:503461 chr11:000503461 0 W/503461-503461 FN4083-S SNP G -> T AC=1;AN=182;BQB=0.99146;DP=3121;DP4=1560,1464,13,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00064082;MQB=1.37099e-09;MQSB=0.0766401;RPB=0.214135;SGB=80.1982;VDB=0.185705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.11:506546 chr11:000506546 0 W/506546-506546 FN1455-S Single Base Substitution G-A INTERGENIC HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN2214-S.SNP.11:508811 chr11:000508811 0 W/508811-508811 FN2214-S SNP C -> T AC=1;AN=190;BQB=0.344578;DP=4953;DP4=2389,2292,11,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18797e-13;MQSB=0.685582;RPB=0.999458;SGB=112.85;VDB=0.339025;EFF=INTERGENIC(MODIFIER||||||||||1) FN851-S.SNP.11:512589 chr11:000512589 0 W/512589-512589 FN851-S Single Base Substitution C-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2267-S.SNP.11:512770 chr11:000512770 0 W/512770-512770 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.999914;DP=4113;DP4=2082,1730,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.50834e-07;MQSB=0.866468;RPB=0.98509;SGB=1.00337;VDB=0.714626;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.11:513142 chr11:000513142 0 W/513142-513142 FN3516-S SNP C -> A AC=2;AN=188;BQB=0.768672;DP=3326;DP4=1810,1445,18,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000300661;MQB=2.7577e-18;MQSB=0.993465;RPB=0.958774;SGB=96.2203;VDB=0.420347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.11:513143 chr11:000513143 0 W/513143-513143 FN3516-S SNP T -> C AC=2;AN=188;BQB=0.99285;DP=3324;DP4=1789,1420,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000300842;MQB=9.64413e-21;MQSB=0.997149;RPB=0.858053;SGB=30.2309;VDB=0.0648962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.11:516089 chr11:000516089 0 W/516089-516089 FN2417 SNP G -> A AC=1;AN=200;BQB=0.532551;DP=5544;DP4=2316,2940,7,5;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0984849;MQB=0.859936;MQSB=9.63653e-19;RPB=0.724105;SGB=49.6594;VDB=0.76076;EFF=INTRON(MODIFIER||||213|LOC_Os11g01960|protein_coding|CODING|LOC_Os11g01960.1|1|1) FN1108-S.SNP.11:521210 chr11:000521210 0 W/521210-521210 FN1108-S Single Base Substitution C-A INTRON HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2126-S.SNP.11:526378 chr11:000526378 0 W/526378-526378 FN2126-S SNP T -> A AC=1;AN=168;BQB=0.0738133;DP=2508;DP4=1483,938,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.36609e-07;MQSB=0.891742;RPB=0.973762;SGB=-92.9238;VDB=0.465577;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.11:531821 chr11:000531821 0 W/531821-531821 FN550-S Single Base Substitution G-A INTRON HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN558-S.SNP.11:539221 chr11:000539221 0 W/539221-539221 FN558-S Single Base Substitution G-A INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3507-S.SNP.11:539285 chr11:000539285 0 W/539285-539285 FN3507-S SNP G -> T AC=1;AN=188;BQB=0.963735;DP=2881;DP4=1398,1414,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.11213e-07;MQSB=0.960354;RPB=0.999798;SGB=53.5223;VDB=0.612432;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.11:545990 chr11:000545990 0 W/545990-545990 FN2454 SNP T -> C AC=1;AN=200;BQB=0.933304;DP=4268;DP4=2090,1829,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03803e-06;MQSB=0.916003;RPB=0.955587;SGB=26.8797;VDB=0.371298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.11:563799 chr11:000563799 0 W/563799-563799 FN1480-S Single Base Substitution T-A INTRON Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1480-S.SNP.11:563801 chr11:000563801 0 W/563801-563801 FN1480-S Single Base Substitution C-A INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN1600-S.SNP.11:564367 chr11:000564367 0 W/564367-564367 FN1600-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3470-S.SNP.11:571116 chr11:000571116 0 W/571116-571116 FN3470-S SNP G -> A AC=1;AN=184;BQB=0.8338;DP=2625;DP4=1281,1254,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.000380952;MQB=0.551144;MQSB=0.000359938;RPB=0.450657;SGB=98.4821;VDB=0.890079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.11:574224 chr11:000574224 0 W/574224-574224 FN2572-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g02110 expressed protein SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN924-S.SNP.11:577918 chr11:000577918 0 W/577918-577918 FN924-S Single Base Substitution C-A INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN701-S.SNP.11:580294 chr11:000580294 0 W/580294-580294 FN701-S Single Base Substitution A-G INTRON HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3676-S.SNP.11:585686 chr11:000585686 0 W/585686-585686 FN3676-S SNP G -> T AC=2;AN=190;BQB=0.688061;DP=2841;DP4=1401,1236,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.08747e-10;MQSB=0.561454;RPB=0.633059;SGB=49.1985;VDB=0.697324;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.11:587567 chr11:000587567 0 W/587567-587567 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.990664;DP=4015;DP4=2224,1701,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.0826899;MQB=0.226258;MQSB=3.89586e-19;RPB=0.993852;SGB=44.1115;VDB=0.823545;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.11:588385 chr11:000588385 0 W/588385-588385 FN1022-S Single Base Substitution G-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN1209-S.SNP.11:599147 chr11:000599147 0 W/599147-599147 FN1209-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g02159 expressed protein SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN2742-S.SNP.11:604806 chr11:000604806 0 W/604806-604806 FN2742-S SNP A -> T AC=1;AN=200;BQB=0.915275;DP=4820;DP4=2530,2137,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.71647e-12;MQSB=0.99775;RPB=0.339438;SGB=91.1059;VDB=0.19196;EFF=INTRON(MODIFIER||||271|LOC_Os11g02180|protein_coding|CODING|LOC_Os11g02180.1|1|1) FN3827-S.SNP.11:606242 chr11:000606242 0 W/606242-606242 FN3827-S SNP A -> C AC=1;AN=190;BQB=0.896945;DP=2914;DP4=1546,1262,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.92467e-06;MQSB=0.915941;RPB=0.248817;SGB=18.552;VDB=0.932793;EFF=INTRON(MODIFIER||||271|LOC_Os11g02180|protein_coding|CODING|LOC_Os11g02180.1|1|1) FN891-S.SNP.11:634190 chr11:000634190 0 W/634190-634190 FN891-S Single Base Substitution G-C INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN1394-S.SNP.11:634206 chr11:000634206 0 W/634206-634206 FN1394-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3440-S.SNP.11:638208 chr11:000638208 0 W/638208-638208 FN3440-S SNP G -> A AC=2;AN=184;BQB=0.883325;DP=2362;DP4=1221,903,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.51086e-11;MQSB=0.845079;RPB=0.514034;SGB=43.4494;VDB=0.93389;EFF=INTERGENIC(MODIFIER||||||||||1) FN1686-S.SNP.11:641217 chr11:000641217 0 W/641217-641217 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.115517;DP=2849;DP4=1034,1779,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19899e-09;MQSB=0.310559;RPB=0.946964;SGB=-70.6427;VDB=0.225263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.11:649603 chr11:000649603 0 W/649603-649603 FN1634-S Single Base Substitution A-G INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1375-S.SNP.11:662654 chr11:000662654 0 W/662654-662654 FN1375-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN943-S.SNP.11:666338 chr11:000666338 0 W/666338-666338 FN943-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g02320 nucleotidyltransferase, putative, expressed SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN3713-S.SNP.11:669146 chr11:000669146 0 W/669146-669146 FN3713-S SNP C -> T AC=2;AN=190;BQB=0.68984;DP=2963;DP4=1580,1261,19,11;HOB=0.020831;ICB=0.494793;MQ=25;MQ0F=0.176848;MQB=0.326887;MQSB=0;RPB=0.998699;SGB=96.5165;VDB=0.921498;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E115K|801|LOC_Os11g02320|protein_coding|CODING|LOC_Os11g02320.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E115K|801|LOC_Os11g02320|protein_coding|CODING|LOC_Os11g02320.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E115K|783|LOC_Os11g02320|protein_coding|CODING|LOC_Os11g02320.3|2|1) W463-2-1.SNP.11:671033 chr11:000671033 0 W/671033-671033 W463-2-1 Single Base Substitution G-A INTRON HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3438-S.SNP.11:672064 chr11:000672064 0 W/672064-672064 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.988019;DP=3368;DP4=1837,1432,16,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07352e-13;MQSB=0.99884;RPB=0.225212;SGB=78.0093;VDB=0.199587;EFF=UTR_5_PRIME(MODIFIER||140||334|LOC_Os11g02310|protein_coding|CODING|LOC_Os11g02310.1|1|1) FN1466-S.SNP.11:679034 chr11:000679034 0 W/679034-679034 FN1466-S Single Base Substitution G-A INTERGENIC Homo SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN594-S.SNP.11:679602 chr11:000679602 0 W/679602-679602 FN594-S Single Base Substitution C-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN832-S.SNP.11:688273 chr11:000688273 0 W/688273-688273 FN832-S Single Base Substitution G-T INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2388.SNP.11:689052 chr11:000689052 0 W/689052-689052 FN2388 SNP C -> T AC=2;AN=200;BQB=0.99101;DP=4657;DP4=2138,2249,29,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.60271e-30;MQSB=0.576813;RPB=0.437153;SGB=206.107;VDB=0.460766;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.11:691878 chr11:000691878 0 W/691878-691878 FN2470 SNP T -> A AC=1;AN=200;BQB=0.244196;DP=3629;DP4=1836,1424,5,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000135271;MQSB=0.397324;RPB=0.974997;SGB=26.6347;VDB=0.243804;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.11:694955 chr11:000694955 0 W/694955-694955 FN378-S Single Base Substitution G-A INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN1453-S.SNP.11:704196 chr11:000704196 0 W/704196-704196 FN1453-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN735-S.SNP.11:704368 chr11:000704368 0 W/704368-704368 FN735-S Single Base Substitution T-C INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN516-S.SNP.11:705116 chr11:000705116 0 W/705116-705116 FN516-S Single Base Substitution C-A INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. W466-5-1.SNP.11:710052 chr11:000710052 0 W/710052-710052 W466-5-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2329.SNP.11:711268 chr11:000711268 0 W/711268-711268 FN2329 SNP C -> T AC=1;AN=192;BQB=0.906254;DP=5178;DP4=2780,2140,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.32683e-16;MQSB=0.816686;RPB=0.97189;SGB=27.6913;VDB=0.0132628;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.11:712993 chr11:000712993 0 W/712993-712993 FN-182 Single Base Substitution T-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN2532-S.SNP.11:718187 chr11:000718187 0 W/718187-718187 FN2532-S SNP A -> G AC=1;AN=198;BQB=0.997632;DP=4364;DP4=2026,2083,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.92843e-11;MQSB=0.981982;RPB=0.168503;SGB=72.5245;VDB=0.26206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.11:722117 chr11:000722117 0 W/722117-722117 FN2555-S SNP C -> T AC=1;AN=198;BQB=0.851891;DP=4235;DP4=1969,2061,11,1;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.79049e-06;MQSB=0.920487;RPB=0.995414;SGB=32.9588;VDB=0.1371;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.11:724468 chr11:000724468 0 W/724468-724468 FN3491-S SNP A -> T AC=2;AN=188;BQB=0.988875;DP=2610;DP4=1209,1330,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91434e-10;MQSB=0.993062;RPB=0.905937;SGB=67.1521;VDB=0.805293;EFF=UTR_3_PRIME(MODIFIER||341||118|LOC_Os11g02424|protein_coding|CODING|LOC_Os11g02424.2|2|1),INTRON(MODIFIER||||233|LOC_Os11g02424|protein_coding|CODING|LOC_Os11g02424.1|1|1) FN496-S.SNP.11:725734 chr11:000725734 0 W/725734-725734 FN496-S Single Base Substitution G-A INTRON HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN-380.SNP.11:738421 chr11:000738421 0 W/738421-738421 FN-380 Single Base Substitution G-A INTRON HOMO SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2715-S.SNP.11:765546 chr11:000765546 0 W/765546-765546 FN2715-S SNP A -> G AC=1;AN=200;BQB=0.933266;DP=4303;DP4=2090,2069,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26708e-10;MQSB=0.992161;RPB=0.4203;SGB=47.4799;VDB=0.0241319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.11:774148 chr11:000774148 0 W/774148-774148 FN2479 SNP A -> G AC=2;AN=200;BQB=0.437641;DP=3633;DP4=1981,1424,20,8;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.0110102;MQB=0.00058308;MQSB=2.9886e-31;RPB=0.947316;SGB=123.342;VDB=0.425618;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.11:774360 chr11:000774360 0 W/774360-774360 FN1151-S Single Base Substitution G-A INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-345.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN-345 Single Base Substitution C-T INTERGENIC HOMO SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-71.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN-71 Single Base Substitution C-T INTERGENIC HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1093-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN1093-S Single Base Substitution C-T INTERGENIC HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1158-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN1158-S Single Base Substitution C-T INTERGENIC HET SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN2279-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.874536;DP=3982;DP4=1532,2202,19,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.89447e-20;MQSB=0.043669;RPB=0.986406;SGB=156.932;VDB=0.557406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN2337 SNP C -> T AC=1;AN=192;BQB=0.996825;DP=4558;DP4=1951,2395,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.46892e-13;MQSB=0.803346;RPB=0.935037;SGB=94.8539;VDB=0.0132217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN2486 SNP C -> T AC=2;AN=200;BQB=0.117;DP=3881;DP4=1473,2192,19,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.65711e-17;MQSB=0.804572;RPB=0.283999;SGB=115.978;VDB=0.287703;EFF=INTERGENIC(MODIFIER||||||||||1) FN3665-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN3665-S SNP C -> T AC=2;AN=190;BQB=0.533277;DP=2395;DP4=925,1346,16,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.94335e-18;MQSB=0.453524;RPB=0.65388;SGB=175.678;VDB=0.831098;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN4063-S SNP C -> T AC=2;AN=168;BQB=0.866794;DP=2294;DP4=908,1286,9,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.12553e-12;MQSB=0.253383;RPB=0.965607;SGB=96.481;VDB=0.584918;EFF=INTERGENIC(MODIFIER||||||||||1) FN4069-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN4069-S SNP C -> T AC=2;AN=182;BQB=0.346114;DP=2738;DP4=1174,1449,35,28;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.66408e-27;MQSB=0.331542;RPB=0.860146;SGB=273.174;VDB=0.993659;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN627-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN627-S Single Base Substitution C-T INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN725-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN836-S.SNP.11:778173 chr11:000778173 0 W/778173-778173 FN836-S Single Base Substitution C-T INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN2483.SNP.11:779285 chr11:000779285 0 W/779285-779285 FN2483 SNP G -> T AC=1;AN=200;BQB=0.267938;DP=4661;DP4=1996,2306,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53581e-07;MQSB=0.999975;RPB=0.694987;SGB=6.27959;VDB=0.992409;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.11:785161 chr11:000785161 0 W/785161-785161 FN3343-S SNP G -> T AC=1;AN=184;BQB=0.470866;DP=2946;DP4=1422,1439,3,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.67742e-10;MQSB=0.978234;RPB=0.946821;SGB=38.4058;VDB=0.61524;EFF=INTERGENIC(MODIFIER||||||||||1) FN2350.SNP.11:791449 chr11:000791449 0 W/791449-791449 FN2350 SNP C -> T AC=1;AN=192;BQB=0.412394;DP=4882;DP4=2083,2428,18,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.35844e-19;MQSB=0.946352;RPB=0.552187;SGB=140.497;VDB=0.849136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.11:795985 chr11:000795985 0 W/795985-795985 FN2267-S SNP T -> G AC=2;AN=190;BQB=0.60227;DP=4852;DP4=1973,2550,21,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.80751e-13;MQSB=0.537808;RPB=0.938192;SGB=67.0756;VDB=0.951558;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.11:799346 chr11:000799346 0 W/799346-799346 FN-160 Single Base Substitution T-G INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN2262-S.SNP.11:805086 chr11:000805086 0 W/805086-805086 FN2262-S SNP T -> A AC=1;AN=190;BQB=0.649192;DP=5075;DP4=2340,2373,7,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.49918e-10;MQSB=0.962515;RPB=0.106237;SGB=-10.4526;VDB=0.228048;EFF=INTRON(MODIFIER||||865|LOC_Os11g02550|protein_coding|CODING|LOC_Os11g02550.1|1|1) FN2446.SNP.11:806147 chr11:000806147 0 W/806147-806147 FN2446 SNP A -> T AC=1;AN=200;BQB=0.997463;DP=5276;DP4=2557,2414,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000379075;MQB=1.15558e-10;MQSB=0.837722;RPB=0.999097;SGB=51.0851;VDB=0.863121;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.11:813916 chr11:000813916 0 W/813916-813916 FN-231 Single Base Substitution A-G UTR_5_PRIME HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN2332.SNP.11:814666 chr11:000814666 0 W/814666-814666 FN2332 SNP G -> T AC=1;AN=192;BQB=0.641102;DP=4918;DP4=2320,2321,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.000406669;MQB=6.18685e-09;MQSB=0.908123;RPB=0.976983;SGB=59.6861;VDB=0.959046;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G80V|252|LOC_Os11g02580|protein_coding|CODING|LOC_Os11g02580.1|2|1) FN-83.SNP.11:824637 chr11:000824637 0 W/824637-824637 FN-83 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g02610 BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN1243-S.SNP.11:829207 chr11:000829207 0 W/829207-829207 FN1243-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g02620 BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN4136-S.SNP.11:829729 chr11:000829729 0 W/829729-829729 FN4136-S SNP T -> C AC=1;AN=170;BQB=0.889235;DP=2434;DP4=946,1432,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.66228e-08;MQSB=0.944199;RPB=0.782946;SGB=38.3207;VDB=0.757462;EFF=INTRON(MODIFIER||||643|LOC_Os11g02620|protein_coding|CODING|LOC_Os11g02620.1|2|1) FN2386.SNP.11:833034 chr11:000833034 0 W/833034-833034 FN2386 SNP G -> T AC=1;AN=192;BQB=0.994981;DP=4875;DP4=2355,2215,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00184615;MQB=0.0523124;MQSB=0.230523;RPB=0.664929;SGB=57.1218;VDB=0.7224;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.11:835721 chr11:000835721 0 W/835721-835721 FN3287-S SNP A -> G AC=1;AN=184;BQB=0.760415;DP=3875;DP4=1702,1945,14,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.22029e-14;MQSB=0.901423;RPB=0.488747;SGB=-8.97434;VDB=0.238157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1374-S.SNP.11:842213 chr11:000842213 0 W/842213-842213 FN1374-S Single Base Substitution C-A INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN988-S.SNP.11:858108 chr11:000858108 0 W/858108-858108 FN988-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g02670 zinc finger, C3HC4 type domain containing protein, expressed SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2203-S.SNP.11:860049 chr11:000860049 0 W/860049-860049 FN2203-S SNP A -> G AC=1;AN=190;BQB=0.929627;DP=4705;DP4=2106,2345,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00148778;MQB=2.07625e-09;MQSB=0.814454;RPB=0.910837;SGB=53.8699;VDB=0.324714;EFF=INTRON(MODIFIER||||491|LOC_Os11g02670|protein_coding|CODING|LOC_Os11g02670.1|2|1) FN-211.SNP.11:868030 chr11:000868030 0 W/868030-868030 FN-211 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g02690 expressed protein SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3919-S.SNP.11:869433 chr11:000869433 0 W/869433-869433 FN3919-S SNP G -> A AC=1;AN=158;BQB=0.539142;DP=2314;DP4=1041,1130,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000104738;MQSB=0.0612262;RPB=0.934817;SGB=9.60209;VDB=0.414348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.11:873394 chr11:000873394 0 W/873394-873394 FN2462 SNP T -> C AC=1;AN=200;BQB=0.0869233;DP=4280;DP4=1639,2028,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.13209e-05;MQSB=0.988089;RPB=0.442093;SGB=3.06925;VDB=0.515892;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R450|978|LOC_Os11g02700|protein_coding|CODING|LOC_Os11g02700.1|2|1) FN3758-S.SNP.11:873688 chr11:000873688 0 W/873688-873688 FN3758-S SNP C -> T AC=1;AN=190;BQB=0.991142;DP=2862;DP4=1278,1461,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.56649e-05;MQSB=0.960292;RPB=0.678504;SGB=35.4339;VDB=0.132404;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S352|978|LOC_Os11g02700|protein_coding|CODING|LOC_Os11g02700.1|2|1) FN2453.SNP.11:874893 chr11:000874893 0 W/874893-874893 FN2453 SNP A -> G AC=2;AN=200;BQB=0.942383;DP=4731;DP4=2220,2240,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.72898e-22;MQSB=0.562748;RPB=0.998152;SGB=99.8245;VDB=0.436007;EFF=INTRON(MODIFIER||||978|LOC_Os11g02700|protein_coding|CODING|LOC_Os11g02700.1|1|1) FN3697-S.SNP.11:881035 chr11:000881035 0 W/881035-881035 FN3697-S SNP G -> A AC=1;AN=190;BQB=0.998837;DP=2536;DP4=1309,1149,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46016e-08;MQSB=0.903859;RPB=0.987995;SGB=43.2083;VDB=0.909864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.11:881730 chr11:000881730 0 W/881730-881730 FN2123-S SNP G -> A AC=2;AN=166;BQB=0.430397;DP=3436;DP4=1334,2031,26,32;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=2.41815e-24;MQSB=0.950925;RPB=0.905613;SGB=-122.99;VDB=0.183232;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.11:897795 chr11:000897795 0 W/897795-897795 FN3606-S SNP G -> A AC=1;AN=190;BQB=0.380251;DP=2953;DP4=1404,1444,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.70333e-08;MQSB=0.519047;RPB=0.523257;SGB=33.8752;VDB=0.681326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.11:899375 chr11:000899375 0 W/899375-899375 FN2217-S SNP A -> G AC=1;AN=190;BQB=0.238639;DP=5435;DP4=2794,2484,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00588776;MQB=5.40532e-05;MQSB=1.15464e-06;RPB=0.323024;SGB=13.4442;VDB=0.525133;EFF=INTERGENIC(MODIFIER||||||||||1) FN554-S.SNP.11:900357 chr11:000900357 0 W/900357-900357 FN554-S Single Base Substitution A-G INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN2681-S.SNP.11:900365 chr11:000900365 0 W/900365-900365 FN2681-S SNP A -> G AC=1;AN=200;BQB=0.816097;DP=4983;DP4=2432,2230,20,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06846e-21;MQSB=0.939263;RPB=0.666559;SGB=92.009;VDB=0.813737;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.11:904957 chr11:000904957 0 W/904957-904957 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.898355;DP=2175;DP4=1217,895,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.24178e-05;MQSB=0.525166;RPB=0.930808;SGB=23.9652;VDB=0.301776;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.11:916731 chr11:000916731 0 W/916731-916731 FN555-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2611-S.SNP.11:916753 chr11:000916753 0 W/916753-916753 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.81152;DP=4309;DP4=2122,1858,9,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.89366e-11;MQSB=5.66294e-12;RPB=0.860268;SGB=61.9006;VDB=0.209278;EFF=START_GAINED(LOW||||120|LOC_Os11g02778|protein_coding|CODING|LOC_Os11g02778.1|1|1),UTR_5_PRIME(MODIFIER||246||120|LOC_Os11g02778|protein_coding|CODING|LOC_Os11g02778.1|1|1) FN3095-S.SNP.11:917344 chr11:000917344 0 W/917344-917344 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.426003;DP=3587;DP4=1603,1831,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00195149;MQB=7.70901e-07;MQSB=0.566096;RPB=0.378352;SGB=6.80232;VDB=0.994473;EFF=UTR_5_PRIME(MODIFIER||837||120|LOC_Os11g02778|protein_coding|CODING|LOC_Os11g02778.1|1|1) FN2476.SNP.11:921704 chr11:000921704 0 W/921704-921704 FN2476 SNP G -> A AC=1;AN=200;BQB=0.15536;DP=4759;DP4=2108,2305,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210128;MQB=7.50025e-13;MQSB=0.969347;RPB=0.592485;SGB=45.1159;VDB=0.670154;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C1553|1718|LOC_Os11g02780|protein_coding|CODING|LOC_Os11g02780.1|5|1) FN4206-S.SNP.11:923245 chr11:000923245 0 W/923245-923245 FN4206-S SNP G -> C AC=1;AN=170;BQB=0.577201;DP=2589;DP4=1345,1177,12,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00463499;MQB=6.20098e-06;MQSB=0.860777;RPB=0.820644;SGB=41.7633;VDB=0.0283262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Gtt|L1080V|1718|LOC_Os11g02780|protein_coding|CODING|LOC_Os11g02780.1|4|1) FN-344.SNP.11:931482 chr11:000931482 0 W/931482-931482 FN-344 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g02800 DUF567 domain containing protein, putative, expressed SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN479-S.SNP.11:937170 chr11:000937170 0 W/937170-937170 FN479-S Single Base Substitution A-T INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN618-S.SNP.11:938118 chr11:000938118 0 W/938118-938118 FN618-S Single Base Substitution T-G INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1554-S.SNP.11:945415 chr11:000945415 0 W/945415-945415 FN1554-S Single Base Substitution C-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN4146-S.SNP.11:946677 chr11:000946677 0 W/946677-946677 FN4146-S SNP C -> T AC=2;AN=170;BQB=0.953315;DP=2589;DP4=1345,1173,17,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.54861e-20;MQSB=0.998893;RPB=0.593965;SGB=158.938;VDB=0.329536;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.11:963461 chr11:000963461 0 W/963461-963461 FN3979-S SNP C -> A AC=1;AN=168;BQB=0.997557;DP=2551;DP4=1334,1082,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.93473e-10;MQSB=0.681713;RPB=0.198626;SGB=78.7577;VDB=0.56791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2729-S.SNP.11:969648 chr11:000969648 0 W/969648-969648 FN2729-S SNP A -> T AC=1;AN=200;BQB=0.605798;DP=5067;DP4=2593,2219,17,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.62982e-13;MQSB=0.84592;RPB=0.930375;SGB=-8.26887;VDB=0.713604;EFF=INTERGENIC(MODIFIER||||||||||1) FN4025-S.SNP.11:975838 chr11:000975838 0 W/975838-975838 FN4025-S SNP G -> A AC=2;AN=168;BQB=0.311649;DP=2751;DP4=1395,1237,11,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.97943e-08;MQSB=0.995762;RPB=0.715801;SGB=27.0464;VDB=0.103298;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S2|1860|LOC_Os11g02880|protein_coding|CODING|LOC_Os11g02880.1|1|1) FN4025-S.SNP.11:975839 chr11:000975839 0 W/975839-975839 FN4025-S SNP G -> A AC=2;AN=168;BQB=0.87651;DP=2746;DP4=1392,1232,10,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.65724e-08;MQSB=0.983157;RPB=0.969287;SGB=52.1728;VDB=0.0975129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D3N|1860|LOC_Os11g02880|protein_coding|CODING|LOC_Os11g02880.1|1|1) FN2765-S.SNP.11:975856 chr11:000975856 0 W/975856-975856 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.0380995;DP=4177;DP4=2018,1886,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.60071e-14;MQSB=0.979919;RPB=0.97198;SGB=-75.2793;VDB=0.64801;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N8|1860|LOC_Os11g02880|protein_coding|CODING|LOC_Os11g02880.1|1|1) FN901-S.SNP.11:976166 chr11:000976166 0 W/976166-976166 FN901-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g02880 retrotransposon protein, putative, unclassified, expressed SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN1633-S.SNP.11:977852 chr11:000977852 0 W/977852-977852 FN1633-S Single Base Substitution C-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN-185.SNP.11:979282 chr11:000979282 0 W/979282-979282 FN-185 Single Base Substitution T-G INTRON HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1049-S.SNP.11:991993 chr11:000991993 0 W/991993-991993 FN1049-S Single Base Substitution C-A INTERGENIC HOMO SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN-293.SNP.11:992736 chr11:000992736 0 W/992736-992736 FN-293 Single Base Substitution C-T INTERGENIC HET SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1192-S.SNP.11:993501 chr11:000993501 0 W/993501-993501 FN1192-S Single Base Substitution G-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN1120-S.SNP.11:994521 chr11:000994521 0 W/994521-994521 FN1120-S Single Base Substitution T-C INTERGENIC HOMO SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN1739-S.SNP.11:1008275 chr11:001008275 0 W/1008275-1008275 FN1739-S SNP T -> C AC=1;AN=188;BQB=0.00708123;DP=3056;DP4=1388,1634,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.82428e-06;MQSB=0.938402;RPB=0.787088;SGB=10.1681;VDB=0.428304;EFF=INTERGENIC(MODIFIER||||||||||1) FN3090-S.SNP.11:1016702 chr11:001016702 0 W/1016702-1016702 FN3090-S SNP G -> T AC=1;AN=184;BQB=0.908849;DP=3058;DP4=1708,1225,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.25681e-08;MQSB=0.978361;RPB=0.314042;SGB=66.8296;VDB=0.268925;EFF=INTERGENIC(MODIFIER||||||||||1) FN840-S.SNP.11:1024006 chr11:001024006 0 W/1024006-1024006 FN840-S Single Base Substitution G-A INTRON HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN777-S.SNP.11:1024158 chr11:001024158 0 W/1024158-1024158 FN777-S Single Base Substitution G-A INTRON HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN870-S.SNP.11:1026730 chr11:001026730 0 W/1026730-1026730 FN870-S Single Base Substitution C-G INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3423-S.SNP.11:1039447 chr11:001039447 0 W/1039447-1039447 FN3423-S SNP C -> T AC=1;AN=184;BQB=0.731952;DP=2741;DP4=1276,1392,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.07194e-08;MQSB=0.951442;RPB=0.999819;SGB=53.2642;VDB=0.881236;EFF=INTRON(MODIFIER||||325|LOC_Os11g02980|protein_coding|CODING|LOC_Os11g02980.1|1|1) FN2093-S.SNP.11:1041060 chr11:001041060 0 W/1041060-1041060 FN2093-S SNP C -> A AC=1;AN=168;BQB=0.877196;DP=3572;DP4=1862,1627,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27145e-15;MQSB=0.997424;RPB=0.281679;SGB=-79.0524;VDB=0.470689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2529-S.SNP.11:1042312 chr11:001042312 0 W/1042312-1042312 FN2529-S SNP T -> C AC=1;AN=198;BQB=0.852288;DP=4272;DP4=2187,1885,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000171151;MQSB=0.710799;RPB=0.835248;SGB=11.1786;VDB=0.754296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K197E|304|LOC_Os11g02990|protein_coding|CODING|LOC_Os11g02990.1|4|1) FN4325-S.SNP.11:1044288 chr11:001044288 0 W/1044288-1044288 FN4325-S SNP C -> T AC=2;AN=170;BQB=0.902382;DP=2725;DP4=1463,1162,16,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.50149e-18;MQSB=0.990309;RPB=0.279703;SGB=145.61;VDB=0.582063;EFF=INTRON(MODIFIER||||264|LOC_Os11g03000|protein_coding|CODING|LOC_Os11g03000.1|2|1) FN1722-S.SNP.11:1044594 chr11:001044594 0 W/1044594-1044594 FN1722-S SNP G -> A AC=1;AN=188;BQB=0.185251;DP=3362;DP4=1987,1336,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.5873e-09;MQSB=0.958599;RPB=0.714688;SGB=13.2547;VDB=0.969311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G124R|264|LOC_Os11g03000|protein_coding|CODING|LOC_Os11g03000.1|3|1) FN1415-S.SNP.11:1045396 chr11:001045396 0 W/1045396-1045396 FN1415-S Single Base Substitution T-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3311-S.SNP.11:1062294 chr11:001062294 0 W/1062294-1062294 FN3311-S SNP A -> C AC=2;AN=184;BQB=0.642655;DP=3354;DP4=1628,1591,24,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.78466e-25;MQSB=0.949491;RPB=0.0986176;SGB=159.01;VDB=0.650979;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.11:1062294 chr11:001062294 0 W/1062294-1062294 FN3311-S Single Base Substitution A-C INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3436-S.SNP.11:1062294 chr11:001062294 0 W/1062294-1062294 FN3436-S SNP A -> C AC=1;AN=184;BQB=0.742617;DP=3120;DP4=1608,1424,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.24062e-12;MQSB=0.984968;RPB=0.780775;SGB=63.9222;VDB=0.391661;EFF=INTERGENIC(MODIFIER||||||||||1) FN530-S.SNP.11:1062294 chr11:001062294 0 W/1062294-1062294 FN530-S Single Base Substitution A-C INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN3437-S.SNP.11:1064887 chr11:001064887 0 W/1064887-1064887 FN3437-S SNP C -> T AC=2;AN=184;BQB=0.837814;DP=3152;DP4=1615,1432,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.05958e-13;MQSB=0.968326;RPB=0.801663;SGB=116.569;VDB=0.665509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A89T|702|LOC_Os11g03040|protein_coding|CODING|LOC_Os11g03040.1|1|1) FN996-S.SNP.11:1064961 chr11:001064961 0 W/1064961-1064961 FN996-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g03040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN419-S.SNP.11:1065879 chr11:001065879 0 W/1065879-1065879 FN419-S Single Base Substitution C-T INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN524-S.SNP.11:1067115 chr11:001067115 0 W/1067115-1067115 FN524-S Single Base Substitution G-A INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2638-S.SNP.11:1072235 chr11:001072235 0 W/1072235-1072235 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.983062;DP=4843;DP4=2270,2405,6,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00309725;MQB=4.46388e-09;MQSB=0.782097;RPB=0.846306;SGB=54.6902;VDB=0.113185;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I384V|424|LOC_Os11g03050|protein_coding|CODING|LOC_Os11g03050.1|8|1) FN468-S.SNP.11:1080493 chr11:001080493 0 W/1080493-1080493 FN468-S Single Base Substitution G-A INTRON HET SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN2093-S.SNP.11:1084471 chr11:001084471 0 W/1084471-1084471 FN2093-S SNP C -> A AC=1;AN=168;BQB=0.00113464;DP=4190;DP4=2151,1912,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000238663;MQB=0.00116452;MQSB=0.999999;RPB=0.0273552;SGB=-335.313;VDB=0.603942;EFF=INTERGENIC(MODIFIER||||||||||1) FN-86.SNP.11:1085592 chr11:001085592 0 W/1085592-1085592 FN-86 Single Base Substitution G-A INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN2713-S.SNP.11:1089887 chr11:001089887 0 W/1089887-1089887 FN2713-S SNP A -> G AC=2;AN=200;BQB=0.597556;DP=4792;DP4=2635,1940,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.37733e-27;MQSB=0.109705;RPB=0.528417;SGB=215.445;VDB=0.616251;EFF=INTRON(MODIFIER||||82|LOC_Os11g03080|protein_coding|CODING|LOC_Os11g03080.1|1|1) FN448-S.SNP.11:1096912 chr11:001096912 0 W/1096912-1096912 FN448-S Single Base Substitution C-T INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-255.SNP.11:1117111 chr11:001117111 0 W/1117111-1117111 FN-255 Single Base Substitution T-C INTERGENIC HET SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN-275.SNP.11:1117111 chr11:001117111 0 W/1117111-1117111 FN-275 Single Base Substitution T-C INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN739-S.SNP.11:1117111 chr11:001117111 0 W/1117111-1117111 FN739-S Single Base Substitution T-C INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.11:1117111 chr11:001117111 0 W/1117111-1117111 FN988-S Single Base Substitution T-C INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3533-S.SNP.11:1117790 chr11:001117790 0 W/1117790-1117790 FN3533-S SNP C -> T AC=1;AN=188;BQB=0.891842;DP=2893;DP4=1241,1574,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.20882e-08;MQSB=0.992075;RPB=0.955585;SGB=48.979;VDB=0.390412;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.11:1121115 chr11:001121115 0 W/1121115-1121115 FN3713-S SNP G -> A AC=2;AN=190;BQB=0.982988;DP=2616;DP4=1697,822,15,4;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00382263;MQB=1.29038e-05;MQSB=0.0018222;RPB=0.789229;SGB=80.9724;VDB=0.207039;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E393|651|LOC_Os11g03110|protein_coding|CODING|LOC_Os11g03110.1|1|1) FN851-S.SNP.11:1125970 chr11:001125970 0 W/1125970-1125970 FN851-S Single Base Substitution A-T INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2344.SNP.11:1127846 chr11:001127846 0 W/1127846-1127846 FN2344 SNP A -> T AC=1;AN=192;BQB=0.999994;DP=4737;DP4=2170,2272,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.2204e-10;MQSB=0.468772;RPB=0.991548;SGB=51.9931;VDB=0.463835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.11:1128861 chr11:001128861 0 W/1128861-1128861 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.997892;DP=4955;DP4=2039,2568,10,22;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000605449;MQB=0.000689475;MQSB=0.983621;RPB=0.958602;SGB=141.763;VDB=0.114687;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G98|283|LOC_Os11g03130|protein_coding|CODING|LOC_Os11g03130.1|1|1) FN-203.SNP.11:1135167 chr11:001135167 0 W/1135167-1135167 FN-203 Single Base Substitution G-A INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN3958-S.SNP.11:1135283 chr11:001135283 0 W/1135283-1135283 FN3958-S SNP A -> T AC=1;AN=168;BQB=0.753055;DP=2868;DP4=1565,1169,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.22099e-07;MQSB=0.941676;RPB=0.980597;SGB=47.7421;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.11:1138921 chr11:001138921 0 W/1138921-1138921 FN-94 Single Base Substitution C-A INTRON HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN3309-S.SNP.11:1143884 chr11:001143884 0 W/1143884-1143884 FN3309-S SNP G -> T AC=1;AN=184;BQB=0.885283;DP=3083;DP4=1217,1741,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52387e-07;MQSB=0.983633;RPB=0.955896;SGB=62.3078;VDB=0.219508;EFF=INTERGENIC(MODIFIER||||||||||1) FN1504-S.SNP.11:1144088 chr11:001144088 0 W/1144088-1144088 FN1504-S Single Base Substitution C-G INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. W360-2S-2.SNP.11:1144520 chr11:001144520 0 W/1144520-1144520 W360-2S-2 Single Base Substitution C-T INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1484-S.SNP.11:1144673 chr11:001144673 0 W/1144673-1144673 FN1484-S Single Base Substitution A-T INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN973-S.SNP.11:1148056 chr11:001148056 0 W/1148056-1148056 FN973-S Single Base Substitution T-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2629-S.SNP.11:1152675 chr11:001152675 0 W/1152675-1152675 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.869536;DP=5444;DP4=2660,2518,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00422483;MQB=4.11155e-17;MQSB=0.406284;RPB=0.547082;SGB=97.9523;VDB=0.553624;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.11:1155868 chr11:001155868 0 W/1155868-1155868 FN547-S Single Base Substitution T-G INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN3525-S.SNP.11:1157858 chr11:001157858 0 W/1157858-1157858 FN3525-S SNP C -> T AC=2;AN=188;BQB=0.998036;DP=2657;DP4=1240,1344,7,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.36469e-09;MQSB=0.863693;RPB=0.398118;SGB=39.5276;VDB=0.717157;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.11:1161992 chr11:001161992 0 W/1161992-1161992 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN899-S.SNP.11:1167693 chr11:001167693 0 W/1167693-1167693 FN899-S Single Base Substitution A-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN1031-S.SNP.11:1171411 chr11:001171411 0 W/1171411-1171411 FN1031-S Single Base Substitution G-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-164.SNP.11:1172428 chr11:001172428 0 W/1172428-1172428 FN-164 Single Base Substitution A-G INTERGENIC HET SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN-278.SNP.11:1173029 chr11:001173029 0 W/1173029-1173029 FN-278 Single Base Substitution C-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2390.SNP.11:1174554 chr11:001174554 0 W/1174554-1174554 FN2390 SNP T -> C AC=2;AN=200;BQB=0.738333;DP=4733;DP4=2051,2371,23,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.2309e-27;MQSB=0.996778;RPB=0.582827;SGB=105.035;VDB=0.523817;EFF=INTERGENIC(MODIFIER||||||||||1) FN777-S.SNP.11:1178911 chr11:001178911 0 W/1178911-1178911 FN777-S Single Base Substitution A-T INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN777-S.SNP.11:1178925 chr11:001178925 0 W/1178925-1178925 FN777-S Single Base Substitution C-T INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN1707-S.SNP.11:1180964 chr11:001180964 0 W/1180964-1180964 FN1707-S SNP A -> C AC=1;AN=188;BQB=0.0549825;DP=2455;DP4=460,1973,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0553971;MQB=0.562335;MQSB=0.335421;RPB=0.980539;SGB=35.9843;VDB=0.215402;EFF=INTERGENIC(MODIFIER||||||||||1) FN-19.SNP.11:1191950 chr11:001191950 0 W/1191950-1191950 FN-19 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN2161-S.SNP.11:1195730 chr11:001195730 0 W/1195730-1195730 FN2161-S SNP G -> A AC=1;AN=168;BQB=0.00808135;DP=3389;DP4=1380,1968,5,17;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00885217;MQB=0.0141848;MQSB=2.54463e-12;RPB=0.768868;SGB=-119.349;VDB=0.90617;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.11:1195852 chr11:001195852 0 W/1195852-1195852 FN-185 Single Base Substitution A-T INTERGENIC HOMO SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2164-S.SNP.11:1207305 chr11:001207305 0 W/1207305-1207305 FN2164-S SNP C -> A AC=1;AN=166;BQB=0.472404;DP=4081;DP4=2024,2014,13,19;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=7.49731e-14;MQSB=0.993675;RPB=0.510167;SGB=-45.7659;VDB=0.324721;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P475|548|LOC_Os11g03270|protein_coding|CODING|LOC_Os11g03270.1|10|1) FN2164-S.SNP.11:1207307 chr11:001207307 0 W/1207307-1207307 FN2164-S SNP G -> T AC=1;AN=166;BQB=0.218966;DP=4068;DP4=2026,1994,15,16;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=1.55783e-15;MQSB=0.986748;RPB=0.356373;SGB=-45.1967;VDB=0.672856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R476I|548|LOC_Os11g03270|protein_coding|CODING|LOC_Os11g03270.1|10|1) FN3930-S.SNP.11:1208884 chr11:001208884 0 W/1208884-1208884 FN3930-S SNP A -> G AC=1;AN=158;BQB=0.925247;DP=2261;DP4=1004,1181,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62293e-08;MQSB=0.956333;RPB=0.981019;SGB=60.1755;VDB=0.664634;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.11:1208923 chr11:001208923 0 W/1208923-1208923 FN1662-S Single Base Substitution A-T INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN3775-S.SNP.11:1211775 chr11:001211775 0 W/1211775-1211775 FN3775-S SNP C -> G AC=1;AN=188;BQB=0.85583;DP=2652;DP4=1355,1224,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00188537;MQB=0.00517144;MQSB=0.0360045;RPB=0.729385;SGB=31.3213;VDB=0.272629;EFF=INTRON(MODIFIER||||894|LOC_Os11g03280|protein_coding|CODING|LOC_Os11g03280.1|4|1) FN-393.SNP.11:1219106 chr11:001219106 0 W/1219106-1219106 FN-393 Single Base Substitution A-G INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2433.SNP.11:1219834 chr11:001219834 0 W/1219834-1219834 FN2433 SNP T -> A AC=1;AN=200;BQB=0.909079;DP=4880;DP4=2171,2429,13,16;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0354508;MQB=0.118872;MQSB=6.02839e-08;RPB=0.918672;SGB=127.947;VDB=0.831065;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.11:1221376 chr11:001221376 0 W/1221376-1221376 FN432-S Single Base Substitution G-C INTERGENIC HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN229-S.SNP.11:1221465 chr11:001221465 0 W/1221465-1221465 FN229-S Single Base Substitution C-G INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN1254-S.SNP.11:1238562 chr11:001238562 0 W/1238562-1238562 FN1254-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN414-S.SNP.11:1239364 chr11:001239364 0 W/1239364-1239364 FN414-S Single Base Substitution T-C INTERGENIC HOMO SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN-60.SNP.11:1245539 chr11:001245539 0 W/1245539-1245539 FN-60 Single Base Substitution C-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN1272-S.SNP.11:1247202 chr11:001247202 0 W/1247202-1247202 FN1272-S Single Base Substitution G-A INTRON HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2421.SNP.11:1255422 chr11:001255422 0 W/1255422-1255422 FN2421 SNP C -> T AC=2;AN=200;BQB=0.129179;DP=4888;DP4=2392,2101,27,14;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.251432;MQB=0.412685;MQSB=0;RPB=0.78739;SGB=46.4088;VDB=0.243697;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G117|452|LOC_Os11g03340|protein_coding|CODING|LOC_Os11g03340.1|5|1) FN4146-S.SNP.11:1256089 chr11:001256089 0 W/1256089-1256089 FN4146-S SNP C -> T AC=1;AN=170;BQB=0.342952;DP=2608;DP4=1144,1388,7,13;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0440951;MQB=0.981053;MQSB=2.26542e-13;RPB=0.532027;SGB=83.4133;VDB=0.191835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R279C|452|LOC_Os11g03340|protein_coding|CODING|LOC_Os11g03340.1|7|1) FN-278.SNP.11:1267401 chr11:001267401 0 W/1267401-1267401 FN-278 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g03360 RNA-directed DNA polymerase, putative, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-278.SNP.11:1267402 chr11:001267402 0 W/1267402-1267402 FN-278 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g03360 RNA-directed DNA polymerase, putative, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN813-S.SNP.11:1272055 chr11:001272055 0 W/1272055-1272055 FN813-S Single Base Substitution T-C INTERGENIC HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN2611-S.SNP.11:1285405 chr11:001285405 0 W/1285405-1285405 FN2611-S SNP G -> A AC=1;AN=200;BQB=0.949939;DP=4919;DP4=2290,2278,41,32;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37053e-38;MQSB=0.704838;RPB=0.948496;SGB=201.693;VDB=0.698919;EFF=UTR_3_PRIME(MODIFIER||317||149|LOC_Os11g03400|protein_coding|CODING|LOC_Os11g03400.1|1|1) FN1173-S.SNP.11:1290111 chr11:001290111 0 W/1290111-1290111 FN1173-S Single Base Substitution A-G INTRON HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN728-S.SNP.11:1292332 chr11:001292332 0 W/1292332-1292332 FN728-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN728-S.SNP.11:1292333 chr11:001292333 0 W/1292333-1292333 FN728-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN1661-S.SNP.11:1295781 chr11:001295781 0 W/1295781-1295781 FN1661-S Single Base Substitution T-C INTERGENIC Homo SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN584-S.SNP.11:1295854 chr11:001295854 0 W/1295854-1295854 FN584-S Single Base Substitution T-C INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN3494-S.SNP.11:1298030 chr11:001298030 0 W/1298030-1298030 FN3494-S SNP G -> A AC=1;AN=184;BQB=0.998226;DP=2881;DP4=1418,1352,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.16309e-13;MQSB=0.493515;RPB=0.875922;SGB=45.9712;VDB=0.378569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.11:1302654 chr11:001302654 0 W/1302654-1302654 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.66966;DP=5062;DP4=2564,2177,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.46242e-19;MQSB=0.858586;RPB=0.553534;SGB=101.557;VDB=0.217451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.11:1302826 chr11:001302826 0 W/1302826-1302826 FN3776-S SNP T -> A AC=1;AN=188;BQB=0.713847;DP=2906;DP4=1353,1437,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.6563e-06;MQSB=0.861939;RPB=0.414144;SGB=13.4442;VDB=0.211022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.11:1323170 chr11:001323170 0 W/1323170-1323170 FN3709-S SNP G -> C AC=2;AN=190;BQB=0.918856;DP=2933;DP4=1453,1321,17,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.99283e-16;MQSB=0.96429;RPB=0.870938;SGB=51.7524;VDB=0.184825;EFF=INTERGENIC(MODIFIER||||||||||1) FN-388.SNP.11:1326936 chr11:001326936 0 W/1326936-1326936 FN-388 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g03460 Mad3/BUB1 homology region 1 domain containing protein, expressed SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN2433.SNP.11:1331667 chr11:001331667 0 W/1331667-1331667 FN2433 SNP C -> A AC=1;AN=200;BQB=0.975324;DP=5107;DP4=2298,2428,15,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02571e-20;MQSB=0.976927;RPB=0.922939;SGB=-2.21717;VDB=0.804023;EFF=INTRON(MODIFIER||||395|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.1|7|1),INTRON(MODIFIER||||394|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.2|7|1),INTRON(MODIFIER||||384|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.3|7|1),INTRON(MODIFIER||||256|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.4|7|1) FN2433.SNP.11:1331669 chr11:001331669 0 W/1331669-1331669 FN2433 SNP C -> A AC=1;AN=200;BQB=0.970533;DP=5133;DP4=2356,2441,11,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45923e-19;MQSB=0.998708;RPB=0.70888;SGB=105.163;VDB=0.745545;EFF=INTRON(MODIFIER||||395|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.1|7|1),INTRON(MODIFIER||||394|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.2|7|1),INTRON(MODIFIER||||384|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.3|7|1),INTRON(MODIFIER||||256|LOC_Os11g03470|protein_coding|CODING|LOC_Os11g03470.4|7|1) FN1086-S.SNP.11:1336038 chr11:001336038 0 W/1336038-1336038 FN1086-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g03484 MATE efflux family protein, putative, expressed SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2301.SNP.11:1336213 chr11:001336213 0 W/1336213-1336213 FN2301 SNP A -> T AC=1;AN=192;BQB=0.455137;DP=5126;DP4=2478,2441,5,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.41234e-06;MQSB=0.819549;RPB=0.971989;SGB=35.5177;VDB=0.0991863;EFF=INTRON(MODIFIER||||329|LOC_Os11g03484|protein_coding|CODING|LOC_Os11g03484.1|1|1) FN-388.SNP.11:1340386 chr11:001340386 0 W/1340386-1340386 FN-388 Single Base Substitution A-G INTRON HET SNo: 374, Mutant_ID: FN-388, Generation: M2, Mutations: 36, Genes: 26, Seed availability: Yes. FN547-S.SNP.11:1342345 chr11:001342345 0 W/1342345-1342345 FN547-S Single Base Substitution T-C INTRON HOMO SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN-390.SNP.11:1342621 chr11:001342621 0 W/1342621-1342621 FN-390 Single Base Substitution G-T INTRON HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3577-S.SNP.11:1344204 chr11:001344204 0 W/1344204-1344204 FN3577-S SNP A -> T AC=1;AN=188;BQB=0.993084;DP=2425;DP4=1234,1106,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.00618557;MQB=0.657316;MQSB=0;RPB=0.310408;SGB=53.7007;VDB=0.214472;EFF=INTRON(MODIFIER||||329|LOC_Os11g03484|protein_coding|CODING|LOC_Os11g03484.1|1|1) FN463-S.SNP.11:1344204 chr11:001344204 0 W/1344204-1344204 FN463-S Single Base Substitution A-T INTRON HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1438-S.SNP.11:1354639 chr11:001354639 0 W/1354639-1354639 FN1438-S Single Base Substitution C-T INTERGENIC HET SNo: 1209, Mutant_ID: FN1438-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3569-S.SNP.11:1358010 chr11:001358010 0 W/1358010-1358010 FN3569-S SNP G -> A AC=2;AN=188;BQB=0.991858;DP=2538;DP4=1282,1178,13,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.47729e-19;MQSB=0.992549;RPB=0.223555;SGB=96.2203;VDB=0.0597855;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V43I|138|LOC_Os11g03510|protein_coding|CODING|LOC_Os11g03510.1|2|1) FN1750-S.SNP.11:1359529 chr11:001359529 0 W/1359529-1359529 FN1750-S SNP C -> T AC=2;AN=188;BQB=0.112494;DP=2530;DP4=695,1769,11,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.72247e-15;MQSB=0.185152;RPB=0.125978;SGB=-130.661;VDB=0.18063;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T281|362|LOC_Os11g03520|protein_coding|CODING|LOC_Os11g03520.1|3|1) FN3438-S.SNP.11:1365392 chr11:001365392 0 W/1365392-1365392 FN3438-S SNP C -> G AC=1;AN=184;BQB=0.967867;DP=2611;DP4=1122,1403,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0187668;MQB=0.0835151;MQSB=0.608771;RPB=0.999325;SGB=32.2261;VDB=0.869299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E221Q|449|LOC_Os11g03540|protein_coding|CODING|LOC_Os11g03540.1|6|1) FN2081-S.SNP.11:1376711 chr11:001376711 0 W/1376711-1376711 FN2081-S SNP C -> A AC=1;AN=168;BQB=0.929881;DP=4151;DP4=1843,2240,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.34457e-14;MQSB=0.998413;RPB=0.928868;SGB=44.0621;VDB=0.862844;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.11:1383057 chr11:001383057 0 W/1383057-1383057 FN698-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g03570 protein of unknown function, DUF618 domain containing protein, expressed SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN2673-S.SNP.11:1392160 chr11:001392160 0 W/1392160-1392160 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.977861;DP=4987;DP4=2275,2411,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.12608e-10;MQSB=0.991668;RPB=0.291092;SGB=43.8747;VDB=0.316436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.11:1398425 chr11:001398425 0 W/1398425-1398425 FN2621-S SNP G -> T AC=1;AN=200;BQB=0.885372;DP=4232;DP4=1940,2086,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000236295;MQB=1.23687e-10;MQSB=0.824937;RPB=0.177127;SGB=81.8956;VDB=0.777966;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.11:1398493 chr11:001398493 0 W/1398493-1398493 FN937-S Single Base Substitution A-G INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN-84.SNP.11:1399635 chr11:001399635 0 W/1399635-1399635 FN-84 Single Base Substitution G-C INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN596-S.SNP.11:1399635 chr11:001399635 0 W/1399635-1399635 FN596-S Single Base Substitution G-C INTERGENIC HOMO SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN973-S.SNP.11:1400000 chr11:001400000 0 W/1400000-1400000 FN973-S Single Base Substitution T-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN806-S.SNP.11:1405763 chr11:001405763 0 W/1405763-1405763 FN806-S Single Base Substitution T-A INTRON HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN806-S.SNP.11:1405764 chr11:001405764 0 W/1405764-1405764 FN806-S Single Base Substitution C-A INTRON HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1730-S.SNP.11:1407695 chr11:001407695 0 W/1407695-1407695 FN1730-S SNP G -> T AC=1;AN=188;BQB=0.449336;DP=2367;DP4=1161,1145,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.43244e-09;MQSB=0.994858;RPB=0.295424;SGB=-12.2833;VDB=0.0959856;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.11:1414656 chr11:001414656 0 W/1414656-1414656 FN-288 Single Base Substitution A-C INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1625-S.SNP.11:1415562 chr11:001415562 0 W/1415562-1415562 FN1625-S Single Base Substitution C-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.11:1415562 chr11:001415562 0 W/1415562-1415562 FN1626-S SNP C -> A AC=2;AN=188;BQB=0.088553;DP=2364;DP4=1034,1229,17,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.85752e-12;MQSB=0.998734;RPB=0.983933;SGB=31.7742;VDB=0.577153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.11:1415563 chr11:001415563 0 W/1415563-1415563 FN1625-S Single Base Substitution G-A INTERGENIC Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.11:1415563 chr11:001415563 0 W/1415563-1415563 FN1626-S SNP G -> A AC=2;AN=188;BQB=0.0438027;DP=2377;DP4=1041,1241,18,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.01209e-11;MQSB=0.999233;RPB=0.997288;SGB=-44.2151;VDB=0.735586;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.11:1420407 chr11:001420407 0 W/1420407-1420407 FN725-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g03650 mla1, putative, expressed SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2541-S.SNP.11:1422184 chr11:001422184 0 W/1422184-1422184 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.522252;DP=4388;DP4=2040,2178,17,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.20848e-15;MQSB=0.560063;RPB=0.623282;SGB=52.7004;VDB=0.18269;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.11:1423160 chr11:001423160 0 W/1423160-1423160 FN_814-7-1 Single Base Substitution A-T Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN3438-S.SNP.11:1424935 chr11:001424935 0 W/1424935-1424935 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.936871;DP=2695;DP4=1444,1173,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.29475e-10;MQSB=0.99684;RPB=0.865664;SGB=84.9167;VDB=0.389733;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.11:1441870 chr11:001441870 0 W/1441870-1441870 FN811-S Single Base Substitution T-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2237-S.SNP.11:1449965 chr11:001449965 0 W/1449965-1449965 FN2237-S SNP T -> C AC=2;AN=190;BQB=0.541011;DP=4621;DP4=2207,2038,23,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.71975e-20;MQSB=0.99182;RPB=0.940591;SGB=128.501;VDB=0.688492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.11:1455711 chr11:001455711 0 W/1455711-1455711 FN4166-S SNP T -> A AC=2;AN=170;BQB=0.538923;DP=2458;DP4=1200,1123,11,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.68694e-11;MQSB=0.993051;RPB=0.0275347;SGB=72.7472;VDB=0.606645;EFF=INTRON(MODIFIER||||658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.1|5|1),INTRON(MODIFIER||||658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.2|5|1),INTRON(MODIFIER||||658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.3|5|1) FN3288-S.SNP.11:1455831 chr11:001455831 0 W/1455831-1455831 FN3288-S SNP G -> T AC=1;AN=184;BQB=0.896618;DP=2694;DP4=1247,1358,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.13314e-11;MQSB=0.941134;RPB=0.966799;SGB=6.80232;VDB=0.697292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G204V|658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G204V|658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gTa|G204V|658|LOC_Os11g03730|protein_coding|CODING|LOC_Os11g03730.3|6|1) FN1529-S.SNP.11:1459410 chr11:001459410 0 W/1459410-1459410 FN1529-S Single Base Substitution T-C INTRON HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1356-S.SNP.11:1467932 chr11:001467932 0 W/1467932-1467932 FN1356-S Single Base Substitution G-A INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN436-S.SNP.11:1470661 chr11:001470661 0 W/1470661-1470661 FN436-S Single Base Substitution G-A INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2781-S.SNP.11:1471704 chr11:001471704 0 W/1471704-1471704 FN2781-S SNP T -> C AC=1;AN=198;BQB=0.935159;DP=4358;DP4=1959,2060,3,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.000437485;MQSB=0.0202138;RPB=0.639494;SGB=32.9588;VDB=0.376267;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.11:1472565 chr11:001472565 0 W/1472565-1472565 FN771-S Single Base Substitution T-C INTERGENIC HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN2215-S.SNP.11:1478118 chr11:001478118 0 W/1478118-1478118 FN2215-S SNP C -> G AC=1;AN=190;BQB=0.987631;DP=3881;DP4=1673,1838,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09356e-10;MQSB=0.9271;RPB=0.977838;SGB=50.3161;VDB=0.617891;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.11:1480409 chr11:001480409 0 W/1480409-1480409 FN-269 Single Base Substitution G-T INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3383-S.SNP.11:1480409 chr11:001480409 0 W/1480409-1480409 FN3383-S SNP G -> T AC=2;AN=184;BQB=0.566368;DP=2680;DP4=1360,1198,15,22;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0567164;MQB=0.821792;MQSB=0.0178791;RPB=0.734396;SGB=37.2381;VDB=0.119151;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.11:1480409 chr11:001480409 0 W/1480409-1480409 FN723-S Single Base Substitution G-T INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1272-S.SNP.11:1481170 chr11:001481170 0 W/1481170-1481170 FN1272-S Single Base Substitution T-G INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN4164-S.SNP.11:1492730 chr11:001492730 0 W/1492730-1492730 FN4164-S SNP C -> T AC=1;AN=170;BQB=0.874781;DP=2531;DP4=1293,1192,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.42302e-05;MQSB=0.990292;RPB=0.739314;SGB=38.987;VDB=0.0504901;EFF=INTRON(MODIFIER||||443|LOC_Os11g03794|protein_coding|CODING|LOC_Os11g03794.1|12|1) FN2380.SNP.11:1494213 chr11:001494213 0 W/1494213-1494213 FN2380 SNP C -> A AC=1;AN=192;BQB=0.978631;DP=5393;DP4=2540,2583,13,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7943e-16;MQSB=0.999611;RPB=0.951662;SGB=21.4339;VDB=0.5939;EFF=INTRON(MODIFIER||||443|LOC_Os11g03794|protein_coding|CODING|LOC_Os11g03794.1|9|1) FN3797-S.SNP.11:1504528 chr11:001504528 0 W/1504528-1504528 FN3797-S SNP A -> T AC=1;AN=190;BQB=0.621485;DP=2827;DP4=1474,1297,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79054e-05;MQSB=0.709749;RPB=0.882695;SGB=49.0954;VDB=0.954067;EFF=INTRON(MODIFIER||||116|LOC_Os11g03810|protein_coding|CODING|LOC_Os11g03810.1|5|1) FN2465.SNP.11:1505745 chr11:001505745 0 W/1505745-1505745 FN2465 SNP G -> A AC=1;AN=200;BQB=0.90509;DP=4829;DP4=2025,2507,18,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000414164;MQB=5.66243e-11;MQSB=0.455055;RPB=0.37472;SGB=65.9573;VDB=0.647962;EFF=SYNONYMOUS_STOP(LOW|SILENT|taG/taA|*117|116|LOC_Os11g03810|protein_coding|CODING|LOC_Os11g03810.1|6|1) FN1073-S.SNP.11:1514632 chr11:001514632 0 W/1514632-1514632 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2595-S.SNP.11:1516080 chr11:001516080 0 W/1516080-1516080 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.926984;DP=4454;DP4=2119,2117,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00112259;MQB=2.08106e-10;MQSB=0.154072;RPB=0.90475;SGB=58.1246;VDB=0.332557;EFF=INTRON(MODIFIER||||1138|LOC_Os11g03830|protein_coding|CODING|LOC_Os11g03830.1|4|1) FN2680-S.SNP.11:1520378 chr11:001520378 0 W/1520378-1520378 FN2680-S SNP C -> T AC=1;AN=200;BQB=0.985575;DP=4842;DP4=2475,2085,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00351095;MQB=1.13499e-11;MQSB=0.962534;RPB=0.882623;SGB=45.1159;VDB=0.451055;EFF=INTRON(MODIFIER||||1138|LOC_Os11g03830|protein_coding|CODING|LOC_Os11g03830.1|1|1) FN2749-S.SNP.11:1522543 chr11:001522543 0 W/1522543-1522543 FN2749-S SNP C -> T AC=1;AN=200;BQB=0.936579;DP=4763;DP4=2493,1995,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35623e-07;MQSB=0.993877;RPB=0.0217334;SGB=33.0593;VDB=0.0891378;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G758|841|LOC_Os11g03840|protein_coding|CODING|LOC_Os11g03840.1|1|1) FN543-S.SNP.11:1530614 chr11:001530614 0 W/1530614-1530614 FN543-S Single Base Substitution G-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN543-S.SNP.11:1530615 chr11:001530615 0 W/1530615-1530615 FN543-S Single Base Substitution G-A INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN3613-S.SNP.11:1538054 chr11:001538054 0 W/1538054-1538054 FN3613-S SNP A -> T AC=2;AN=190;BQB=0.882048;DP=2778;DP4=1329,1341,22,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=6.0711e-15;MQSB=0.208555;RPB=0.00439284;SGB=176.604;VDB=0.182777;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.11:1538697 chr11:001538697 0 W/1538697-1538697 FN-195 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3495-S.SNP.11:1543117 chr11:001543117 0 W/1543117-1543117 FN3495-S SNP C -> A AC=2;AN=188;BQB=0.991223;DP=2594;DP4=1190,1303,12,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.12015e-14;MQSB=0.968288;RPB=0.999285;SGB=103.498;VDB=0.374989;EFF=INTERGENIC(MODIFIER||||||||||1) FN2161-S.SNP.11:1549188 chr11:001549188 0 W/1549188-1549188 FN2161-S SNP A -> G AC=1;AN=168;BQB=0.0210392;DP=3702;DP4=1822,1847,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000199791;MQSB=0.0116724;RPB=0.742513;SGB=-15.8033;VDB=0.788006;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.11:1584522 chr11:001584522 0 W/1584522-1584522 FN2631-S SNP A -> T AC=1;AN=200;BQB=0.974158;DP=5419;DP4=2595,2614,10,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.81237e-07;MQSB=7.29357e-13;RPB=0.548746;SGB=42.5108;VDB=0.438364;EFF=INTRON(MODIFIER||||2027|LOC_Os11g03940|protein_coding|CODING|LOC_Os11g03940.1|1|1) FN-19.SNP.11:1586339 chr11:001586339 0 W/1586339-1586339 FN-19 Single Base Substitution C-T INTERGENIC Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN3613-S.SNP.11:1598976 chr11:001598976 0 W/1598976-1598976 FN3613-S SNP G -> A AC=2;AN=190;BQB=0.999921;DP=1061;DP4=165,820,1,13;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.116871;MQB=0.498174;MQSB=0;RPB=0.994361;SGB=58.2031;VDB=0.729579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P356S|1438|LOC_Os11g03960|protein_coding|CODING|LOC_Os11g03960.1|2|1) FN3401-S.SNP.11:1617085 chr11:001617085 0 W/1617085-1617085 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.94482;DP=3877;DP4=2163,1574,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.78388e-10;MQSB=0.98026;RPB=0.883624;SGB=30.8405;VDB=0.104505;EFF=UTR_3_PRIME(MODIFIER||91||341|LOC_Os11g04010|protein_coding|CODING|LOC_Os11g04010.1|1|1) FN2200-S.SNP.11:1625679 chr11:001625679 0 W/1625679-1625679 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.950682;DP=4556;DP4=2242,2062,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.72847e-11;MQSB=0.2619;RPB=0.856178;SGB=11.8805;VDB=0.140505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.11:1626220 chr11:001626220 0 W/1626220-1626220 FN2344 SNP T -> C AC=1;AN=192;BQB=0.962203;DP=3966;DP4=1654,1770,23,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.12542e-20;MQSB=0.524875;RPB=0.773834;SGB=41.7705;VDB=0.675544;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.11:1627253 chr11:001627253 0 W/1627253-1627253 FN-181 Single Base Substitution A-G INTRON HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN-157.SNP.11:1627335 chr11:001627335 0 W/1627335-1627335 FN-157 Single Base Substitution G-C INTRON HOMO SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN-412.SNP.11:1628081 chr11:001628081 0 W/1628081-1628081 FN-412 Single Base Substitution T-A INTRON HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN1750-S.SNP.11:1639233 chr11:001639233 0 W/1639233-1639233 FN1750-S SNP T -> C AC=1;AN=188;BQB=0.943701;DP=2396;DP4=1173,1132,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000417362;MQB=5.31968e-10;MQSB=0.85953;RPB=0.124757;SGB=8.62479;VDB=0.0716127;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:1644067 chr11:001644067 0 W/1644067-1644067 FN2337 SNP A -> T AC=1;AN=192;BQB=0.892393;DP=5068;DP4=2543,2316,6,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.21273e-10;MQSB=0.697899;RPB=0.368213;SGB=57.6018;VDB=0.479185;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L109*|287|LOC_Os11g04060|protein_coding|CODING|LOC_Os11g04060.1|5|1);LOF=(LOC_Os11g04060|LOC_Os11g04060|1|1.00);NMD=(LOC_Os11g04060|LOC_Os11g04060|1|1.00) FN_1017-1.SNP.11:1660900 chr11:001660900 0 W/1660900-1660900 FN_1017-1 Single Base Substitution T-A Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN3525-S.SNP.11:1664454 chr11:001664454 0 W/1664454-1664454 FN3525-S SNP G -> A AC=2;AN=188;BQB=0.53421;DP=2491;DP4=1522,895,10,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.19374e-09;MQSB=0.106919;RPB=0.598303;SGB=62.6088;VDB=0.577638;EFF=INTRON(MODIFIER||||419|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.1|1|1),INTRON(MODIFIER||||490|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.2|1|1),INTRON(MODIFIER||||504|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.3|1|1) FN3525-S.SNP.11:1664455 chr11:001664455 0 W/1664455-1664455 FN3525-S SNP T -> A AC=2;AN=188;BQB=0.995311;DP=2488;DP4=1466,895,10,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08372e-10;MQSB=0.0353809;RPB=0.714707;SGB=28.6195;VDB=0.575974;EFF=INTRON(MODIFIER||||419|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.1|1|1),INTRON(MODIFIER||||490|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.2|1|1),INTRON(MODIFIER||||504|LOC_Os11g04104|protein_coding|CODING|LOC_Os11g04104.3|1|1) FN417-S.SNP.11:1673112 chr11:001673112 0 W/1673112-1673112 FN417-S Single Base Substitution C-T INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN1263-S.SNP.11:1676057 chr11:001676057 0 W/1676057-1676057 FN1263-S Single Base Substitution T-C INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2317.SNP.11:1676473 chr11:001676473 0 W/1676473-1676473 FN2317 SNP C -> T AC=1;AN=192;BQB=0.613191;DP=4989;DP4=2424,2221,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.010022;MQB=0.00114212;MQSB=0.00361552;RPB=0.480763;SGB=44.3;VDB=0.88115;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.11:1680915 chr11:001680915 0 W/1680915-1680915 FN4164-S SNP G -> A AC=1;AN=170;BQB=0.906939;DP=2214;DP4=1066,1095,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=0.00301009;MQSB=0.966756;RPB=0.871847;SGB=17.6652;VDB=0.349081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.11:1685295 chr11:001685295 0 W/1685295-1685295 FN1499-S Single Base Substitution T-A INTRON HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN322-S.SNP.11:1694390 chr11:001694390 0 W/1694390-1694390 FN322-S Single Base Substitution G-C INTERGENIC HET SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN898-S.SNP.11:1720052 chr11:001720052 0 W/1720052-1720052 FN898-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g04220 HEAT repeat family protein, putative, expressed SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN-88.SNP.11:1724715 chr11:001724715 0 W/1724715-1724715 FN-88 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN2354.SNP.11:1736118 chr11:001736118 0 W/1736118-1736118 FN2354 SNP T -> A AC=2;AN=192;BQB=0.999948;DP=5023;DP4=2359,2366,18,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.15261e-20;MQSB=0.952331;RPB=0.94585;SGB=177.012;VDB=0.767935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.11:1737721 chr11:001737721 0 W/1737721-1737721 FN2129-S SNP A -> G AC=1;AN=168;BQB=0.843499;DP=4096;DP4=1992,2032,24,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.852e-18;MQSB=0.995329;RPB=0.1932;SGB=-215.717;VDB=0.20391;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.11:1749366 chr11:001749366 0 W/1749366-1749366 FN2649-S SNP T -> C AC=1;AN=200;BQB=0.852804;DP=4613;DP4=2027,2405,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.55997e-08;MQSB=0.991075;RPB=0.705358;SGB=40.2696;VDB=0.191902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.11:1760742 chr11:001760742 0 W/1760742-1760742 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.975452;DP=2338;DP4=1266,770,12,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000855432;MQB=1.35384e-06;MQSB=8.75852e-10;RPB=0.994992;SGB=62.7569;VDB=0.888862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.11:1761254 chr11:001761254 0 W/1761254-1761254 FN-56 Single Base Substitution C-T INTERGENIC HET SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN2387.SNP.11:1762023 chr11:001762023 0 W/1762023-1762023 FN2387 SNP A -> G AC=1;AN=192;BQB=0.300852;DP=4661;DP4=2217,2231,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28132e-09;MQSB=0.794885;RPB=0.692122;SGB=76.5965;VDB=0.955781;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.11:1762238 chr11:001762238 0 W/1762238-1762238 FN1615-S Single Base Substitution T-C INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN-167.SNP.11:1762454 chr11:001762454 0 W/1762454-1762454 FN-167 Single Base Substitution C-T INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN367-S.SNP.11:1781141 chr11:001781141 0 W/1781141-1781141 FN367-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g04295 pentatricopeptide repeat domain containing protein, putative, expressed SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3358-S.SNP.11:1787134 chr11:001787134 0 W/1787134-1787134 FN3358-S SNP C -> T AC=2;AN=184;BQB=0.593004;DP=2920;DP4=1356,1445,13,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.66346e-15;MQSB=0.887714;RPB=0.739049;SGB=139.178;VDB=0.922765;EFF=INTRON(MODIFIER||||1024|LOC_Os11g04300|protein_coding|CODING|LOC_Os11g04300.1|7|1) FN1283-S.SNP.11:1789406 chr11:001789406 0 W/1789406-1789406 FN1283-S Single Base Substitution C-T INTRON HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3572-S.SNP.11:1791470 chr11:001791470 0 W/1791470-1791470 FN3572-S SNP C -> A AC=1;AN=188;BQB=0.901359;DP=2815;DP4=1319,1347,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0017762;MQB=5.13549e-07;MQSB=0.355698;RPB=0.358104;SGB=62.6088;VDB=0.736613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A429S|1024|LOC_Os11g04300|protein_coding|CODING|LOC_Os11g04300.1|2|1) W596-1-1.SNP.11:1792050 chr11:001792050 0 W/1792050-1792050 W596-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN2639-S.SNP.11:1797400 chr11:001797400 0 W/1797400-1797400 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.210218;DP=4815;DP4=1964,2513,11,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0182762;MQB=0.26855;MQSB=6.51516e-34;RPB=0.942332;SGB=-37.6845;VDB=0.996037;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.11:1797431 chr11:001797431 0 W/1797431-1797431 FN3797-S SNP T -> C AC=1;AN=190;BQB=0.985089;DP=2169;DP4=818,1210,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0341171;MQB=0.09685;MQSB=1.73705e-15;RPB=0.672336;SGB=21.7749;VDB=0.572009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3797-S.SNP.11:1797436 chr11:001797436 0 W/1797436-1797436 FN3797-S SNP C -> G AC=1;AN=190;BQB=0.0850131;DP=2199;DP4=822,1223,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0336517;MQB=0.359871;MQSB=1.6696e-11;RPB=0.683265;SGB=-33.6477;VDB=0.332435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.11:1802593 chr11:001802593 0 W/1802593-1802593 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.985059;DP=3735;DP4=1797,1748,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.62991e-08;MQSB=0.863855;RPB=0.975173;SGB=36.5539;VDB=0.367989;EFF=UTR_3_PRIME(MODIFIER||89||415|LOC_Os11g04330|protein_coding|CODING|LOC_Os11g04330.1|1|1) FN2338.SNP.11:1803213 chr11:001803213 0 W/1803213-1803213 FN2338 SNP A -> G AC=2;AN=192;BQB=0.897286;DP=4703;DP4=2162,2172,24,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.09363e-22;MQSB=0.707394;RPB=0.813622;SGB=52.7209;VDB=0.524497;EFF=INTERGENIC(MODIFIER||||||||||1) FN-93.SNP.11:1804713 chr11:001804713 0 W/1804713-1804713 FN-93 Single Base Substitution G-A INTERGENIC HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1449-S.SNP.11:1804805 chr11:001804805 0 W/1804805-1804805 FN1449-S Single Base Substitution G-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN840-S.SNP.11:1805505 chr11:001805505 0 W/1805505-1805505 FN840-S Single Base Substitution T-C INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3858-S.SNP.11:1810289 chr11:001810289 0 W/1810289-1810289 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.990336;DP=2479;DP4=1116,1181,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.94155e-08;MQSB=0.213206;RPB=0.983474;SGB=44.1818;VDB=0.367878;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.11:1818193 chr11:001818193 0 W/1818193-1818193 FN846-S Single Base Substitution G-A INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN962-S.SNP.11:1824720 chr11:001824720 0 W/1824720-1824720 FN962-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g04390 RNA recognition motif containing protein, expressed SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1647-S.SNP.11:1826278 chr11:001826278 0 W/1826278-1826278 FN1647-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2261-S.SNP.11:1829593 chr11:001829593 0 W/1829593-1829593 FN2261-S SNP G -> A AC=1;AN=190;BQB=0.288699;DP=4703;DP4=2084,2251,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021263;MQB=2.81707e-09;MQSB=0.906129;RPB=0.852876;SGB=38.983;VDB=0.947699;EFF=INTRON(MODIFIER||||549|LOC_Os11g04400|protein_coding|CODING|LOC_Os11g04400.1|1|1) FN3383-S.SNP.11:1829634 chr11:001829634 0 W/1829634-1829634 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.522137;DP=3350;DP4=1596,1664,11,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23472e-10;MQSB=0.999959;RPB=0.949592;SGB=103.004;VDB=0.652896;EFF=INTRON(MODIFIER||||549|LOC_Os11g04400|protein_coding|CODING|LOC_Os11g04400.1|1|1) FN3482-S.SNP.11:1830031 chr11:001830031 0 W/1830031-1830031 FN3482-S SNP A -> G AC=1;AN=184;BQB=0.777441;DP=3002;DP4=1214,1664,6,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.01935e-14;MQSB=0.479402;RPB=0.89569;SGB=15.9331;VDB=0.378149;EFF=INTRON(MODIFIER||||549|LOC_Os11g04400|protein_coding|CODING|LOC_Os11g04400.1|1|1) FN3955-S.SNP.11:1832646 chr11:001832646 0 W/1832646-1832646 FN3955-S SNP T -> A AC=1;AN=168;BQB=0.77382;DP=2539;DP4=1191,1198,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.62742e-08;MQSB=0.782462;RPB=0.999084;SGB=45.0404;VDB=0.297272;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.11:1836242 chr11:001836242 0 W/1836242-1836242 FN2081-S SNP G -> C AC=1;AN=168;BQB=0.463715;DP=4605;DP4=2187,2387,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.4174e-07;MQSB=0.996376;RPB=0.91615;SGB=-36.659;VDB=0.488255;EFF=UTR_3_PRIME(MODIFIER||1433||64|LOC_Os11g04409|protein_coding|CODING|LOC_Os11g04409.1|2|1),UTR_3_PRIME(MODIFIER||1433||64|LOC_Os11g04409|protein_coding|CODING|LOC_Os11g04409.2|2|1) FN2780-S.SNP.11:1837676 chr11:001837676 0 W/1837676-1837676 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.316559;DP=4060;DP4=1831,2004,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.5642e-14;MQSB=0.74683;RPB=0.998297;SGB=100.095;VDB=0.361679;EFF=SYNONYMOUS_STOP(LOW|SILENT|tGa/tAa|*65|64|LOC_Os11g04409|protein_coding|CODING|LOC_Os11g04409.1|1|1),SYNONYMOUS_STOP(LOW|SILENT|tGa/tAa|*65|64|LOC_Os11g04409|protein_coding|CODING|LOC_Os11g04409.2|1|1) W500-4-7-1.SNP.11:1844641 chr11:001844641 0 W/1844641-1844641 W500-4-7-1 Single Base Substitution A-T INTRON HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2155-S.SNP.11:1847265 chr11:001847265 0 W/1847265-1847265 FN2155-S SNP G -> A AC=2;AN=168;BQB=0.254454;DP=2633;DP4=652,1917,2,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.84069e-07;MQSB=0.989323;RPB=0.996545;SGB=-14.9417;VDB=0.708328;EFF=INTRON(MODIFIER||||191|LOC_Os11g04420|protein_coding|CODING|LOC_Os11g04420.1|1|1) FN-309.SNP.11:1855759 chr11:001855759 0 W/1855759-1855759 FN-309 Single Base Substitution G-A INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1085-S.SNP.11:1865810 chr11:001865810 0 W/1865810-1865810 FN1085-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN3681-S.SNP.11:1879074 chr11:001879074 0 W/1879074-1879074 FN3681-S SNP C -> T AC=1;AN=190;BQB=0.995351;DP=2697;DP4=1147,1393,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.14987e-09;MQSB=0.670797;RPB=0.848573;SGB=43.2083;VDB=0.706152;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.11:1880475 chr11:001880475 0 W/1880475-1880475 FN-307 Single Base Substitution C-T INTRON HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN1740-S.SNP.11:1882589 chr11:001882589 0 W/1882589-1882589 FN1740-S SNP C -> A AC=1;AN=188;BQB=0.602656;DP=4152;DP4=1967,2153,6,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000240848;MQB=3.66062e-08;MQSB=0.833703;RPB=0.318083;SGB=-12.8266;VDB=0.580132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.11:1882668 chr11:001882668 0 W/1882668-1882668 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.993809;DP=2813;DP4=1384,1326,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000637848;MQSB=0.342803;RPB=0.534717;SGB=30.8063;VDB=0.594311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.11:1884499 chr11:001884499 0 W/1884499-1884499 FN1173-S Single Base Substitution T-A INTRON HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN972-S.SNP.11:1885053 chr11:001885053 0 W/1885053-1885053 FN972-S Single Base Substitution T-A INTRON HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1072-S.SNP.11:1891043 chr11:001891043 0 W/1891043-1891043 FN1072-S Single Base Substitution T-G INTRON HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1383-S.SNP.11:1899299 chr11:001899299 0 W/1899299-1899299 FN1383-S Single Base Substitution C-T INTRON HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN845-S.SNP.11:1902317 chr11:001902317 0 W/1902317-1902317 FN845-S Single Base Substitution C-T INTRON HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN-153.SNP.11:1902322 chr11:001902322 0 W/1902322-1902322 FN-153 Single Base Substitution G-A INTRON HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3499-S.SNP.11:1903429 chr11:001903429 0 W/1903429-1903429 FN3499-S SNP T -> A AC=2;AN=188;BQB=0.985772;DP=2668;DP4=1386,1220,11,11;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00712144;MQB=3.70412e-07;MQSB=0.997848;RPB=0.799413;SGB=94.4119;VDB=0.532082;EFF=INTRON(MODIFIER||||418|LOC_Os11g04520|protein_coding|CODING|LOC_Os11g04520.2|9|1) FN4151-S.SNP.11:1903696 chr11:001903696 0 W/1903696-1903696 FN4151-S SNP G -> T AC=1;AN=170;BQB=0.920898;DP=2428;DP4=973,1392,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.23937e-06;MQSB=0.6585;RPB=0.311622;SGB=38.987;VDB=0.865097;EFF=INTRON(MODIFIER||||418|LOC_Os11g04520|protein_coding|CODING|LOC_Os11g04520.2|9|1) FN879-S.SNP.11:1912644 chr11:001912644 0 W/1912644-1912644 FN879-S Single Base Substitution C-T INTRON HET SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN266-S.SNP.11:1914276 chr11:001914276 0 W/1914276-1914276 FN266-S Single Base Substitution G-A INTRON HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-305.SNP.11:1915309 chr11:001915309 0 W/1915309-1915309 FN-305 Single Base Substitution T-A INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN853-S.SNP.11:1916850 chr11:001916850 0 W/1916850-1916850 FN853-S Single Base Substitution G-C INTERGENIC HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN757-S.SNP.11:1926741 chr11:001926741 0 W/1926741-1926741 FN757-S Single Base Substitution A-T INTERGENIC HET SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN580-S.SNP.11:1927259 chr11:001927259 0 W/1927259-1927259 FN580-S Single Base Substitution T-C INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2495.SNP.11:1940662 chr11:001940662 0 W/1940662-1940662 FN2495 SNP G -> T AC=1;AN=200;BQB=0.303661;DP=4215;DP4=1911,2026,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000474496;MQB=0.000119116;MQSB=0.282034;RPB=0.791087;SGB=13.8539;VDB=0.925362;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acT|T98|210|LOC_Os11g04580|protein_coding|CODING|LOC_Os11g04580.1|1|1) FN-265.SNP.11:1948253 chr11:001948253 0 W/1948253-1948253 FN-265 Single Base Substitution G-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN2334.SNP.11:1962928 chr11:001962928 0 W/1962928-1962928 FN2334 SNP C -> A AC=1;AN=192;BQB=0.998139;DP=5835;DP4=3339,2173,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0318766;MQB=0.291751;MQSB=0;RPB=0.752526;SGB=39.1713;VDB=0.89666;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.11:1963973 chr11:001963973 0 W/1963973-1963973 FN389-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g04620 retrotransposon protein, putative, unclassified, expressed SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3459-S.SNP.11:1969074 chr11:001969074 0 W/1969074-1969074 FN3459-S SNP A -> T AC=2;AN=184;BQB=0.991247;DP=2883;DP4=1255,1524,12,10;HOB=0.0215028;ICB=0.494625;MQ=33;MQ0F=0.187999;MQB=0.295405;MQSB=0;RPB=0.513548;SGB=93.9603;VDB=0.325471;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.11:1994874 chr11:001994874 0 W/1994874-1994874 FN550-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN2125-S.SNP.11:2004814 chr11:002004814 0 W/2004814-2004814 FN2125-S SNP G -> A AC=2;AN=168;BQB=0.0537926;DP=2386;DP4=1481,833,25,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.10857e-15;MQSB=0.868817;RPB=0.995113;SGB=-49.7502;VDB=0.330095;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.11:2015258 chr11:002015258 0 W/2015258-2015258 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.713277;DP=3031;DP4=1442,1461,11,11;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00890795;MQB=6.44203e-10;MQSB=0.15281;RPB=0.809377;SGB=93.7308;VDB=0.174192;EFF=UTR_3_PRIME(MODIFIER||127||208|LOC_Os11g04720|protein_coding|CODING|LOC_Os11g04720.1|5|1),UTR_3_PRIME(MODIFIER||127||201|LOC_Os11g04720|protein_coding|CODING|LOC_Os11g04720.2|5|1) FN3774-S.SNP.11:2032602 chr11:002032602 0 W/2032602-2032602 FN3774-S SNP G -> A AC=2;AN=190;BQB=0.882261;DP=2296;DP4=1092,1119,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.76847e-13;MQSB=0.0633881;RPB=0.79422;SGB=117.403;VDB=0.329522;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.11:2045432 chr11:002045432 0 W/2045432-2045432 FN-68 Single Base Substitution G-A INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN904-S.SNP.11:2045432 chr11:002045432 0 W/2045432-2045432 FN904-S Single Base Substitution G-A INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN_827-1.SNP.11:2045432 chr11:002045432 0 W/2045432-2045432 FN_827-1 Single Base Substitution G-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN4311-S.SNP.11:2064450 chr11:002064450 0 W/2064450-2064450 FN4311-S SNP T -> A AC=1;AN=170;BQB=0.968387;DP=2665;DP4=1308,1272,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07945e-08;MQSB=0.996084;RPB=0.899467;SGB=34.878;VDB=0.727166;EFF=INTRON(MODIFIER||||256|LOC_Os11g04850|protein_coding|CODING|LOC_Os11g04850.1|2|1),INTRON(MODIFIER||||256|LOC_Os11g04850|protein_coding|CODING|LOC_Os11g04850.2|1|1) FN2492.SNP.11:2066897 chr11:002066897 0 W/2066897-2066897 FN2492 SNP G -> T AC=2;AN=200;BQB=0.696864;DP=3832;DP4=1955,1590,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.06191e-25;MQSB=0.41062;RPB=0.0352959;SGB=137.609;VDB=0.296296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.11:2066898 chr11:002066898 0 W/2066898-2066898 FN2492 SNP G -> T AC=2;AN=200;BQB=0.371207;DP=3826;DP4=1957,1578,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.6383e-23;MQSB=0.390705;RPB=0.0624987;SGB=137.609;VDB=0.342818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.11:2074084 chr11:002074084 0 W/2074084-2074084 FN3748-S SNP T -> C AC=1;AN=190;BQB=0.802172;DP=2751;DP4=1206,1312,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19401e-13;MQSB=0.92624;RPB=0.369886;SGB=25.8654;VDB=0.61812;EFF=INTERGENIC(MODIFIER||||||||||1) FN2278-S.SNP.11:2076202 chr11:002076202 0 W/2076202-2076202 FN2278-S SNP T -> C AC=1;AN=190;BQB=0.184011;DP=4980;DP4=2359,2348,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37639e-16;MQSB=0.853909;RPB=0.986534;SGB=100.07;VDB=0.767886;EFF=INTRON(MODIFIER||||73|LOC_Os11g04880|protein_coding|CODING|LOC_Os11g04880.1|1|1) FN3627-S.SNP.11:2080384 chr11:002080384 0 W/2080384-2080384 FN3627-S SNP T -> G AC=1;AN=190;BQB=0.999937;DP=2855;DP4=1358,1421,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.32551e-08;MQSB=0.995622;RPB=0.999997;SGB=53.6492;VDB=0.107244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.11:2084533 chr11:002084533 0 W/2084533-2084533 FN3301-S SNP A -> G AC=1;AN=184;BQB=0.48753;DP=3232;DP4=1329,1706,1,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.0115207;MQSB=3.09705e-09;RPB=0.992371;SGB=39.699;VDB=0.913584;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.11:2086712 chr11:002086712 0 W/2086712-2086712 FN2229-S SNP A -> G AC=1;AN=190;BQB=0.309593;DP=4810;DP4=2215,2358,13,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.10345e-19;MQSB=0.995256;RPB=0.999301;SGB=110.732;VDB=0.0537503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.11:2087410 chr11:002087410 0 W/2087410-2087410 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.057986;DP=3395;DP4=1363,1963,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.0801089;MQSB=0.968335;RPB=0.358726;SGB=22.1847;VDB=0.818589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V81I|146|LOC_Os11g04894|protein_coding|CODING|LOC_Os11g04894.1|1|1) FN2166-S.SNP.11:2087414 chr11:002087414 0 W/2087414-2087414 FN2166-S SNP G -> C AC=1;AN=168;BQB=0.351739;DP=3306;DP4=1319,1918,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.027627;MQSB=0.973594;RPB=0.762136;SGB=38.1788;VDB=0.811592;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S79|146|LOC_Os11g04894|protein_coding|CODING|LOC_Os11g04894.1|1|1) FN2091-S.SNP.11:2090465 chr11:002090465 0 W/2090465-2090465 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.947847;DP=2470;DP4=1209,1152,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.76317e-09;MQSB=0.938091;RPB=0.867635;SGB=45.0404;VDB=0.681219;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.11:2093295 chr11:002093295 0 W/2093295-2093295 FN4089-S SNP T -> A AC=1;AN=182;BQB=0.976291;DP=3030;DP4=1590,1341,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.98746e-06;MQSB=0.999998;RPB=0.979594;SGB=44.1115;VDB=0.168722;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN-211 Single Base Substitution A-T INTRON HOMO SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN1741-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN1741-S SNP A -> T AC=2;AN=188;BQB=0.0255217;DP=2809;DP4=1601,1153,21,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.34564e-09;MQSB=0.949628;RPB=0.296395;SGB=-225.535;VDB=0.232149;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN2310.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN2310 SNP A -> T AC=1;AN=192;BQB=0.754801;DP=4725;DP4=2169,2212,6,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.51719e-12;MQSB=0.995596;RPB=0.983902;SGB=68.2948;VDB=0.114797;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN3115-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN3115-S SNP A -> T AC=1;AN=184;BQB=0.998936;DP=2671;DP4=1471,1070,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.03875e-10;MQSB=0.926549;RPB=0.844736;SGB=60.4004;VDB=0.516131;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN3809-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN3809-S SNP A -> T AC=2;AN=190;BQB=0.911847;DP=2462;DP4=1362,1003,14,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.32884e-09;MQSB=0.992336;RPB=0.991466;SGB=60.9777;VDB=0.413796;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN3856-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN3856-S SNP A -> T AC=2;AN=158;BQB=0.894328;DP=2224;DP4=1237,893,12,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.32548e-11;MQSB=0.803532;RPB=0.850427;SGB=82.0227;VDB=0.163531;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN4151-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN4151-S SNP A -> T AC=1;AN=170;BQB=0.835164;DP=2373;DP4=1285,1000,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.45788e-06;MQSB=0.999975;RPB=0.763784;SGB=38.987;VDB=0.224432;EFF=INTRON(MODIFIER||||204|LOC_Os11g04920|protein_coding|CODING|LOC_Os11g04920.1|1|1) FN849-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN849-S Single Base Substitution A-T INTRON HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN989-S.SNP.11:2097945 chr11:002097945 0 W/2097945-2097945 FN989-S Single Base Substitution A-T INTRON HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN-141.SNP.11:2101113 chr11:002101113 0 W/2101113-2101113 FN-141 Single Base Substitution G-C INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN4139-S.SNP.11:2109308 chr11:002109308 0 W/2109308-2109308 FN4139-S SNP G -> A AC=2;AN=170;BQB=0.995264;DP=2940;DP4=1396,1438,10,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.37023e-17;MQSB=0.774315;RPB=0.46653;SGB=127.84;VDB=0.552008;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H6|204|LOC_Os11g04935|protein_coding|CODING|LOC_Os11g04935.1|1|1) FN441-S.SNP.11:2119110 chr11:002119110 0 W/2119110-2119110 FN441-S Single Base Substitution C-G INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3444-S.SNP.11:2124507 chr11:002124507 0 W/2124507-2124507 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.888983;DP=3166;DP4=1481,1584,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.91299e-09;MQSB=0.969026;RPB=0.95793;SGB=57.786;VDB=0.224506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:2126627 chr11:002126627 0 W/2126627-2126627 FN2337 SNP T -> C AC=1;AN=192;BQB=0.932048;DP=4773;DP4=2217,2307,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.80478e-09;MQSB=0.820004;RPB=0.988742;SGB=-13.64;VDB=0.702466;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I445T|451|LOC_Os11g04960|protein_coding|CODING|LOC_Os11g04960.1|3|1) FN4158-S.SNP.11:2136226 chr11:002136226 0 W/2136226-2136226 FN4158-S SNP T -> A AC=1;AN=170;BQB=0.992961;DP=2633;DP4=1206,1362,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.28538e-08;MQSB=0.996729;RPB=0.667803;SGB=31.4354;VDB=0.399491;EFF=SPLICE_SITE_REGION(LOW||||709|LOC_Os11g04980|protein_coding|CODING|LOC_Os11g04980.1|14|1),SPLICE_SITE_REGION(LOW||||707|LOC_Os11g04980|protein_coding|CODING|LOC_Os11g04980.2|14|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A374|709|LOC_Os11g04980|protein_coding|CODING|LOC_Os11g04980.1|14|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcT|A372|707|LOC_Os11g04980|protein_coding|CODING|LOC_Os11g04980.2|14|1) FN2309.SNP.11:2154141 chr11:002154141 0 W/2154141-2154141 FN2309 SNP G -> A AC=2;AN=192;BQB=0.966073;DP=4598;DP4=1925,2346,23,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.71117e-18;MQSB=0.653147;RPB=0.452804;SGB=114.631;VDB=0.10805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.11:2158367 chr11:002158367 0 W/2158367-2158367 FN2165-S SNP C -> A AC=1;AN=168;BQB=0.092579;DP=3841;DP4=1485,2329,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.80252e-05;MQSB=0.998794;RPB=0.611361;SGB=-15.3725;VDB=0.932919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.11:2165586 chr11:002165586 0 W/2165586-2165586 FN1655-S Single Base Substitution C-T INTERGENIC HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN-342.SNP.11:2166157 chr11:002166157 0 W/2166157-2166157 FN-342 Single Base Substitution G-C INTERGENIC HET SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN856-S.SNP.11:2175264 chr11:002175264 0 W/2175264-2175264 FN856-S Single Base Substitution G-A INTERGENIC HET SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN4146-S.SNP.11:2177356 chr11:002177356 0 W/2177356-2177356 FN4146-S SNP G -> A AC=2;AN=170;BQB=0.800806;DP=2102;DP4=1120,829,20,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.78527e-17;MQSB=0.851151;RPB=0.865778;SGB=144.797;VDB=0.550746;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P72L|129|LOC_Os11g05020|protein_coding|CODING|LOC_Os11g05020.1|1|1) FN1506-S.SNP.11:2189572 chr11:002189572 0 W/2189572-2189572 FN1506-S Single Base Substitution T-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1099-S.SNP.11:2194085 chr11:002194085 0 W/2194085-2194085 FN1099-S Single Base Substitution G-A INTERGENIC HOMO SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN3999-S.SNP.11:2200835 chr11:002200835 0 W/2200835-2200835 FN3999-S SNP A -> T AC=1;AN=168;BQB=0.882506;DP=1713;DP4=1004,583,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0671337;MQB=0.00136248;MQSB=0.0237431;RPB=0.355069;SGB=-34.9514;VDB=0.39866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2285.SNP.11:2215780 chr11:002215780 0 W/2215780-2215780 FN2285 SNP T -> C AC=1;AN=192;BQB=0.99736;DP=5364;DP4=2773,2278,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.59783e-15;MQSB=0.976812;RPB=0.982334;SGB=27.6913;VDB=0.0690321;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.11:2220782 chr11:002220782 0 W/2220782-2220782 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.997143;DP=3403;DP4=1590,1352,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000293858;MQB=6.64585e-07;MQSB=0.220451;RPB=0.707271;SGB=43.7442;VDB=0.76317;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.11:2223912 chr11:002223912 0 W/2223912-2223912 FN2347 SNP G -> A AC=2;AN=192;BQB=0.65758;DP=1006;DP4=912,2,11,0;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.9413e-07;MQSB=0.952329;RPB=0.749756;SGB=44.6462;VDB=0.000351238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.11:2223913 chr11:002223913 0 W/2223913-2223913 FN2347 SNP A -> T AC=2;AN=192;BQB=0.360982;DP=1026;DP4=975,2,11,0;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.82824e-07;MQSB=0.946247;RPB=0.705257;SGB=44.6462;VDB=0.000346138;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.11:2229216 chr11:002229216 0 W/2229216-2229216 FN4271-S SNP A -> T AC=1;AN=170;BQB=0.980508;DP=2375;DP4=973,1294,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.55253e-05;MQSB=0.916165;RPB=0.177708;SGB=30.1021;VDB=0.00836812;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.11:2234290 chr11:002234290 0 W/2234290-2234290 FN4032-S SNP C -> T AC=2;AN=168;BQB=0.964717;DP=2451;DP4=1189,1121,24,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.83913e-24;MQSB=0.75815;RPB=0.874603;SGB=141.634;VDB=0.311388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2446.SNP.11:2235996 chr11:002235996 0 W/2235996-2235996 FN2446 SNP T -> G AC=1;AN=200;BQB=0.789267;DP=4888;DP4=2436,2151,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2122e-10;MQSB=0.956575;RPB=0.999928;SGB=58.2954;VDB=0.012815;EFF=INTRON(MODIFIER||||629|LOC_Os11g05100|protein_coding|CODING|LOC_Os11g05100.1|1|1) FN2580-S.SNP.11:2238138 chr11:002238138 0 W/2238138-2238138 FN2580-S SNP C -> T AC=2;AN=198;BQB=0.701653;DP=3999;DP4=1870,1892,32,39;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.79839e-42;MQSB=0.948085;RPB=0.978907;SGB=234.904;VDB=0.837013;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D577|629|LOC_Os11g05100|protein_coding|CODING|LOC_Os11g05100.1|7|1) FN679-S.SNP.11:2238474 chr11:002238474 0 W/2238474-2238474 FN679-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN3503-S.SNP.11:2245230 chr11:002245230 0 W/2245230-2245230 FN3503-S SNP C -> T AC=2;AN=188;BQB=0.630415;DP=2731;DP4=1341,1334,4,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.40675e-05;MQSB=0.934969;RPB=0.754036;SGB=35.3493;VDB=0.721112;EFF=UTR_3_PRIME(MODIFIER||1115||186|LOC_Os11g05120|protein_coding|CODING|LOC_Os11g05120.1|3|1) FN2653-S.SNP.11:2250610 chr11:002250610 0 W/2250610-2250610 FN2653-S SNP T -> G AC=2;AN=200;BQB=0.937829;DP=5148;DP4=2426,2497,27,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.35253e-30;MQSB=0.994015;RPB=0.731829;SGB=62.4605;VDB=0.0633058;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1230T|1888|LOC_Os11g05130|protein_coding|CODING|LOC_Os11g05130.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1226T|1884|LOC_Os11g05130|protein_coding|CODING|LOC_Os11g05130.2|6|1) FN4178-S.SNP.11:2250610 chr11:002250610 0 W/2250610-2250610 FN4178-S SNP T -> G AC=1;AN=170;BQB=0.975941;DP=2597;DP4=1130,1319,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.50662e-07;MQSB=0.994941;RPB=0.996411;SGB=24.5502;VDB=0.474122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1230T|1888|LOC_Os11g05130|protein_coding|CODING|LOC_Os11g05130.1|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K1226T|1884|LOC_Os11g05130|protein_coding|CODING|LOC_Os11g05130.2|6|1) FN3659-S.SNP.11:2258590 chr11:002258590 0 W/2258590-2258590 FN3659-S SNP A -> C AC=1;AN=190;BQB=0.997052;DP=2727;DP4=1299,1288,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.50005e-05;MQSB=0.955741;RPB=0.624827;SGB=35.4339;VDB=0.281852;EFF=INTRON(MODIFIER||||358|LOC_Os11g05140|protein_coding|CODING|LOC_Os11g05140.1|5|1) FN_807-3-1.SNP.11:2263989 chr11:002263989 0 W/2263989-2263989 FN_807-3-1 Single Base Substitution G-A Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN3864-S.SNP.11:2268959 chr11:002268959 0 W/2268959-2268959 FN3864-S SNP T -> C AC=1;AN=158;BQB=0.97712;DP=2516;DP4=1222,1186,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.41767e-12;MQSB=0.996481;RPB=0.920969;SGB=61.029;VDB=0.172437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2557-S.SNP.11:2270734 chr11:002270734 0 W/2270734-2270734 FN2557-S SNP A -> G AC=2;AN=198;BQB=0.494788;DP=4378;DP4=2272,1823,11,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.07904e-14;MQSB=0.635637;RPB=0.56742;SGB=100.095;VDB=0.148163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.11:2271294 chr11:002271294 0 W/2271294-2271294 FN3485-S SNP A -> T AC=1;AN=184;BQB=0.986185;DP=2697;DP4=1270,1310,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.39641e-11;MQSB=0.989468;RPB=0.220485;SGB=49.835;VDB=0.435057;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caT|Q36H|366|LOC_Os11g05160|protein_coding|CODING|LOC_Os11g05160.1|1|1) FN3485-S.SNP.11:2271295 chr11:002271295 0 W/2271295-2271295 FN3485-S SNP G -> T AC=1;AN=184;BQB=0.933061;DP=2712;DP4=1307,1346,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0185e-10;MQSB=0.951405;RPB=0.22877;SGB=66.8296;VDB=0.509035;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E37*|366|LOC_Os11g05160|protein_coding|CODING|LOC_Os11g05160.1|1|1);LOF=(LOC_Os11g05160|LOC_Os11g05160|1|1.00);NMD=(LOC_Os11g05160|LOC_Os11g05160|1|1.00) FN2281.SNP.11:2275798 chr11:002275798 0 W/2275798-2275798 FN2281 SNP G -> A AC=2;AN=192;BQB=0.328329;DP=5489;DP4=2640,2405,35,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.96786e-34;MQSB=0.852664;RPB=0.32536;SGB=-573.331;VDB=0.941659;EFF=INTERGENIC(MODIFIER||||||||||1) FN438-S.SNP.11:2285239 chr11:002285239 0 W/2285239-2285239 FN438-S Single Base Substitution C-T INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN1529-S.SNP.11:2286576 chr11:002286576 0 W/2286576-2286576 FN1529-S Single Base Substitution T-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2118-S.SNP.11:2292953 chr11:002292953 0 W/2292953-2292953 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.928801;DP=4286;DP4=2017,2188,13,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55686e-17;MQSB=0.925977;RPB=0.764073;SGB=-9.7719;VDB=0.199797;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.11:2293021 chr11:002293021 0 W/2293021-2293021 FN2708-S SNP T -> A AC=2;AN=200;BQB=0.84788;DP=4807;DP4=2543,1964,31,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.64373e-27;MQSB=0.963693;RPB=0.994987;SGB=6.25521;VDB=0.032514;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.11:2293273 chr11:002293273 0 W/2293273-2293273 FN1274-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN409-S.SNP.11:2307978 chr11:002307978 0 W/2307978-2307978 FN409-S Single Base Substitution G-T INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN3632-S.SNP.11:2314168 chr11:002314168 0 W/2314168-2314168 FN3632-S SNP G -> A AC=2;AN=190;BQB=0.9973;DP=2628;DP4=1207,1300,14,10;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.00342466;MQB=0.000209775;MQSB=2.1898e-17;RPB=0.811193;SGB=75.1932;VDB=0.569973;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A996T|1603|LOC_Os11g05220|protein_coding|CODING|LOC_Os11g05220.1|4|1) FN3632-S.SNP.11:2314169 chr11:002314169 0 W/2314169-2314169 FN3632-S SNP C -> A AC=2;AN=190;BQB=0.857328;DP=2623;DP4=1226,1295,14,7;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.00381243;MQB=0.000182697;MQSB=3.5742e-16;RPB=0.471809;SGB=90.0802;VDB=0.296812;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A996E|1603|LOC_Os11g05220|protein_coding|CODING|LOC_Os11g05220.1|4|1) FN4151-S.SNP.11:2316180 chr11:002316180 0 W/2316180-2316180 FN4151-S SNP G -> A AC=1;AN=170;BQB=0.995105;DP=2969;DP4=1625,1286,11,11;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0501852;MQB=0.338292;MQSB=1.95948e-10;RPB=0.409185;SGB=92.2986;VDB=0.558207;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1492|1603|LOC_Os11g05220|protein_coding|CODING|LOC_Os11g05220.1|10|1) FN-11.SNP.11:2318690 chr11:002318690 0 W/2318690-2318690 FN-11 Single Base Substitution T-A INTERGENIC Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3569-S.SNP.11:2326007 chr11:002326007 0 W/2326007-2326007 FN3569-S SNP C -> T AC=2;AN=188;BQB=0.980523;DP=3016;DP4=1480,1452,15,24;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00265252;MQB=4.66351e-17;MQSB=0.00011549;RPB=0.107323;SGB=128.11;VDB=0.075817;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S98|161|LOC_Os11g05250|protein_coding|CODING|LOC_Os11g05250.1|2|1) FN3659-S.SNP.11:2326337 chr11:002326337 0 W/2326337-2326337 FN3659-S SNP C -> T AC=1;AN=190;BQB=0.422667;DP=2363;DP4=1167,1003,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0143885;MQB=0.059516;MQSB=0.911017;RPB=0.816746;SGB=21.8853;VDB=0.558106;EFF=INTRON(MODIFIER||||161|LOC_Os11g05250|protein_coding|CODING|LOC_Os11g05250.1|2|1) FN-148.SNP.11:2327919 chr11:002327919 0 W/2327919-2327919 FN-148 Single Base Substitution A-G INTERGENIC HOMO SNo: 148, Mutant_ID: FN-148, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2662-S.SNP.11:2329282 chr11:002329282 0 W/2329282-2329282 FN2662-S SNP C -> T AC=2;AN=200;BQB=0.528095;DP=4723;DP4=2160,2246,19,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.21179e-26;MQSB=0.965169;RPB=0.129881;SGB=187.814;VDB=0.3932;EFF=INTERGENIC(MODIFIER||||||||||1) FN4089-S.SNP.11:2339944 chr11:002339944 0 W/2339944-2339944 FN4089-S SNP G -> T AC=1;AN=182;BQB=0.954523;DP=3243;DP4=1519,1592,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000308356;MQB=7.94376e-08;MQSB=0.729975;RPB=0.888862;SGB=66.6657;VDB=0.000928987;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A67S|338|LOC_Os11g05280|protein_coding|CODING|LOC_Os11g05280.1|1|1) FN1371-S.SNP.11:2349392 chr11:002349392 0 W/2349392-2349392 FN1371-S Single Base Substitution A-G INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN769-S.SNP.11:2350784 chr11:002350784 0 W/2350784-2350784 FN769-S Single Base Substitution G-T INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2545-S.SNP.11:2352135 chr11:002352135 0 W/2352135-2352135 FN2545-S SNP G -> T AC=1;AN=198;BQB=0.772478;DP=3909;DP4=1585,1948,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0910719;MQB=0.99959;MQSB=0.0256104;RPB=0.715168;SGB=36.5539;VDB=0.996152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3957-S.SNP.11:2352549 chr11:002352549 0 W/2352549-2352549 FN3957-S SNP C -> T AC=1;AN=168;BQB=0.857232;DP=2839;DP4=1158,1569,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.06103e-06;MQSB=0.00259849;RPB=0.921847;SGB=34.748;VDB=0.237864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2725-S.SNP.11:2366329 chr11:002366329 0 W/2366329-2366329 FN2725-S SNP G -> A AC=1;AN=200;BQB=0.974195;DP=4826;DP4=2342,2217,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.84166e-08;MQSB=0.996262;RPB=0.768486;SGB=26.8797;VDB=0.671454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H715Y|1185|LOC_Os11g05340|protein_coding|CODING|LOC_Os11g05340.1|11|1) FN3981-S.SNP.11:2368064 chr11:002368064 0 W/2368064-2368064 FN3981-S SNP C -> A AC=2;AN=168;BQB=0.840398;DP=2357;DP4=1075,1168,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.79271e-11;MQSB=0.999632;RPB=0.754186;SGB=96.481;VDB=0.472454;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A412S|1185|LOC_Os11g05340|protein_coding|CODING|LOC_Os11g05340.1|9|1) FN887-S.SNP.11:2373717 chr11:002373717 0 W/2373717-2373717 FN887-S Single Base Substitution A-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN887-S.SNP.11:2373718 chr11:002373718 0 W/2373718-2373718 FN887-S Single Base Substitution C-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2774-S.SNP.11:2377333 chr11:002377333 0 W/2377333-2377333 FN2774-S SNP C -> T AC=1;AN=198;BQB=0.966779;DP=4414;DP4=1774,2406,5,14;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=2.40143e-08;MQSB=0.88304;RPB=0.998125;SGB=34.5346;VDB=0.98568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.11:2379256 chr11:002379256 0 W/2379256-2379256 FN2449 SNP G -> T AC=2;AN=200;BQB=0.0369279;DP=4636;DP4=2016,2352,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000215703;MQB=2.41181e-14;MQSB=0.297201;RPB=0.171954;SGB=31.9623;VDB=0.693425;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G40*|352|LOC_Os11g05360|protein_coding|CODING|LOC_Os11g05360.1|1|1);LOF=(LOC_Os11g05360|LOC_Os11g05360|1|1.00);NMD=(LOC_Os11g05360|LOC_Os11g05360|1|1.00) FN_N1-26-1.SNP.11:2387377 chr11:002387377 0 W/2387377-2387377 FN_N1-26-1 Single Base Substitution G-A Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN1635-S.SNP.11:2389470 chr11:002389470 0 W/2389470-2389470 FN1635-S SNP T -> C AC=1;AN=188;BQB=0.00986531;DP=3497;DP4=1823,1641,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.03157e-06;MQSB=0.964868;RPB=0.800024;SGB=-117.892;VDB=0.446115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.11:2390374 chr11:002390374 0 W/2390374-2390374 FN2537-S SNP G -> A AC=1;AN=198;BQB=0.65769;DP=4085;DP4=2037,1836,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.81327e-08;MQSB=0.991364;RPB=0.633843;SGB=47.3393;VDB=0.116311;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.11:2391077 chr11:002391077 0 W/2391077-2391077 FN4325-S SNP G -> A AC=2;AN=170;BQB=0.989886;DP=2426;DP4=1069,1274,5,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.53086e-08;MQSB=0.980103;RPB=0.955504;SGB=56.7575;VDB=0.798635;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A411|520|LOC_Os11g05380|protein_coding|CODING|LOC_Os11g05380.1|1|1) FN2260-S.SNP.11:2398257 chr11:002398257 0 W/2398257-2398257 FN2260-S SNP T -> A AC=1;AN=190;BQB=0.996489;DP=4874;DP4=2088,2259,22,25;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.29297e-19;MQSB=0.988096;RPB=0.0138622;SGB=-49.262;VDB=0.431588;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.11:2410399 chr11:002410399 0 W/2410399-2410399 FN1627-S Single Base Substitution G-A INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN3798-S.SNP.11:2413894 chr11:002413894 0 W/2413894-2413894 FN3798-S SNP A -> G AC=1;AN=190;BQB=0.977928;DP=2660;DP4=1414,1146,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92626e-07;MQSB=0.969688;RPB=0.925003;SGB=53.6492;VDB=0.056073;EFF=UTR_3_PRIME(MODIFIER||131||451|LOC_Os11g05390|protein_coding|CODING|LOC_Os11g05390.1|14|1) FN3890-S.SNP.11:2431932 chr11:002431932 0 W/2431932-2431932 FN3890-S SNP C -> G AC=2;AN=158;BQB=0.705665;DP=2750;DP4=1272,1340,31,21;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.35733e-30;MQSB=0.736912;RPB=0.395471;SGB=216.492;VDB=0.69407;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.11:2441486 chr11:002441486 0 W/2441486-2441486 FN-76 Single Base Substitution C-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN3455-S.SNP.11:2442532 chr11:002442532 0 W/2442532-2442532 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.450131;DP=2538;DP4=1214,1218,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.50155e-06;MQSB=0.988613;RPB=0.754714;SGB=35.7479;VDB=0.229076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.11:2443941 chr11:002443941 0 W/2443941-2443941 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN2239-S.SNP.11:2445518 chr11:002445518 0 W/2445518-2445518 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.973498;DP=3772;DP4=1519,1927,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.59455e-08;MQSB=0.999994;RPB=0.827453;SGB=53.6492;VDB=0.641758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D63N|159|LOC_Os11g05440|protein_coding|CODING|LOC_Os11g05440.1|1|1) FN3980-S.SNP.11:2446118 chr11:002446118 0 W/2446118-2446118 FN3980-S SNP T -> A AC=2;AN=168;BQB=0.99805;DP=2315;DP4=1272,874,8,4;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000431965;MQB=0.00029965;MQSB=0.0374321;RPB=0.506401;SGB=47.7421;VDB=0.681875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.11:2448756 chr11:002448756 0 W/2448756-2448756 FN2530-S SNP A -> T AC=1;AN=198;BQB=0.898009;DP=3950;DP4=1928,1806,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81393e-05;MQSB=0.821205;RPB=0.630839;SGB=16.3688;VDB=0.436305;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.11:2450599 chr11:002450599 0 W/2450599-2450599 FN2240-S SNP A -> T AC=1;AN=190;BQB=0.297482;DP=3825;DP4=1787,1639,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.14671e-07;MQSB=0.392782;RPB=0.241463;SGB=-15.4375;VDB=0.174567;EFF=INTRON(MODIFIER||||129|LOC_Os11g05460|protein_coding|CODING|LOC_Os11g05460.1|1|1) FN2240-S.SNP.11:2450602 chr11:002450602 0 W/2450602-2450602 FN2240-S SNP C -> G AC=1;AN=190;BQB=0.638992;DP=3797;DP4=1810,1674,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.87338e-05;MQSB=0.480174;RPB=0.999384;SGB=32.5467;VDB=0.469658;EFF=INTRON(MODIFIER||||129|LOC_Os11g05460|protein_coding|CODING|LOC_Os11g05460.1|1|1) FN666-S.SNP.11:2452517 chr11:002452517 0 W/2452517-2452517 FN666-S Single Base Substitution T-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN666-S.SNP.11:2452519 chr11:002452519 0 W/2452519-2452519 FN666-S Single Base Substitution A-T INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN-232.SNP.11:2453061 chr11:002453061 0 W/2453061-2453061 FN-232 Single Base Substitution T-C UTR_3_PRIME HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3115-S.SNP.11:2455613 chr11:002455613 0 W/2455613-2455613 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.656407;DP=2724;DP4=1258,1370,5,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.59616e-11;MQSB=0.999859;RPB=0.956491;SGB=53.3568;VDB=0.0610272;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.11:2455614 chr11:002455614 0 W/2455614-2455614 FN3115-S SNP C -> T AC=1;AN=184;BQB=0.914908;DP=2736;DP4=1246,1392,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.52018e-12;MQSB=0.997573;RPB=0.660079;SGB=35.884;VDB=0.0380792;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.11:2458479 chr11:002458479 0 W/2458479-2458479 FN-76 Single Base Substitution A-C INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1084-S.SNP.11:2479969 chr11:002479969 0 W/2479969-2479969 FN1084-S Single Base Substitution A-C INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1600-S.SNP.11:2480126 chr11:002480126 0 W/2480126-2480126 FN1600-S Single Base Substitution G-A INTERGENIC HET SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2204-S.SNP.11:2481981 chr11:002481981 0 W/2481981-2481981 FN2204-S SNP C -> G AC=1;AN=190;BQB=0.553404;DP=3678;DP4=1734,1662,9,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.81593e-13;MQSB=0.775755;RPB=0.510362;SGB=19.6499;VDB=0.66634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cGc|P49R|90|LOC_Os11g05494|protein_coding|CODING|LOC_Os11g05494.1|1|1) FN2282.SNP.11:2482166 chr11:002482166 0 W/2482166-2482166 FN2282 SNP T -> A AC=1;AN=192;BQB=0.939107;DP=5570;DP4=2739,2478,24,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.7497e-21;MQSB=0.868405;RPB=0.986371;SGB=-0.659969;VDB=0.0642725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.11:2487616 chr11:002487616 0 W/2487616-2487616 FN1566-S Single Base Substitution C-G INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN510-S.SNP.11:2496699 chr11:002496699 0 W/2496699-2496699 FN510-S Single Base Substitution A-T INTERGENIC HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1759-S.SNP.11:2498120 chr11:002498120 0 W/2498120-2498120 FN1759-S SNP G -> T AC=1;AN=188;BQB=0.201852;DP=4048;DP4=1980,2022,13,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63797e-13;MQSB=0.978688;RPB=0.822212;SGB=-79.383;VDB=0.928531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.11:2499535 chr11:002499535 0 W/2499535-2499535 FN1151-S Single Base Substitution G-A INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN4041-S.SNP.11:2525469 chr11:002525469 0 W/2525469-2525469 FN4041-S SNP A -> G AC=2;AN=168;BQB=0.873535;DP=2186;DP4=1307,699,8,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.55595e-11;MQSB=0.604289;RPB=0.787665;SGB=36.7696;VDB=0.0698151;EFF=INTRON(MODIFIER||||108|LOC_Os11g05562|protein_coding|CODING|LOC_Os11g05562.1|3|1) 704-1-1.SNP.11:2533770 chr11:002533770 0 W/2533770-2533770 704-1-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN-292.SNP.11:2534072 chr11:002534072 0 W/2534072-2534072 FN-292 Single Base Substitution A-T INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN2103-S.SNP.11:2557413 chr11:002557413 0 W/2557413-2557413 FN2103-S SNP C -> T AC=1;AN=168;BQB=0.858069;DP=2745;DP4=1305,1398,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.55775e-09;MQSB=0.966356;RPB=0.778285;SGB=27.0464;VDB=0.854133;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.11:2559999 chr11:002559999 0 W/2559999-2559999 FN4052-S SNP A -> G AC=1;AN=168;BQB=0.911921;DP=2618;DP4=1119,1397,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.05302e-12;MQSB=0.709675;RPB=0.993712;SGB=75.9177;VDB=0.908813;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.11:2560131 chr11:002560131 0 W/2560131-2560131 FN-368 Single Base Substitution A-C INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN2756-S.SNP.11:2561379 chr11:002561379 0 W/2561379-2561379 FN2756-S SNP T -> C AC=1;AN=200;BQB=0.89108;DP=4472;DP4=2060,2091,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.66421e-11;MQSB=0.675255;RPB=0.708016;SGB=81.8956;VDB=0.212125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M119T|394|LOC_Os11g05640|protein_coding|CODING|LOC_Os11g05640.1|2|1) FN2098-S.SNP.11:2574292 chr11:002574292 0 W/2574292-2574292 FN2098-S SNP A -> T AC=1;AN=168;BQB=0.99715;DP=4400;DP4=2108,2226,23,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.3283e-17;MQSB=0.353027;RPB=0.181573;SGB=-4.6021;VDB=0.296808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.11:2579105 chr11:002579105 0 W/2579105-2579105 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.921543;DP=2630;DP4=1260,1232,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62785e-05;MQSB=0.998171;RPB=0.774562;SGB=30.6558;VDB=0.702288;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.11:2580667 chr11:002580667 0 W/2580667-2580667 FN654-S Single Base Substitution C-T INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1640-S.SNP.11:2581389 chr11:002581389 0 W/2581389-2581389 FN1640-S Single Base Substitution T-G INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1156-S.SNP.11:2583464 chr11:002583464 0 W/2583464-2583464 FN1156-S Single Base Substitution C-T INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1156-S.SNP.11:2583465 chr11:002583465 0 W/2583465-2583465 FN1156-S Single Base Substitution A-T INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN740-S.SNP.11:2597471 chr11:002597471 0 W/2597471-2597471 FN740-S Single Base Substitution T-C INTRON HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN892-S.SNP.11:2598641 chr11:002598641 0 W/2598641-2598641 FN892-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g05690 amino acid permease family protein, putative, expressed SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3675-S.SNP.11:2600977 chr11:002600977 0 W/2600977-2600977 FN3675-S SNP G -> T AC=1;AN=190;BQB=0.803089;DP=3324;DP4=1543,1660,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.01552e-08;MQSB=0.664721;RPB=0.834363;SGB=-0.550503;VDB=0.338575;EFF=INTRON(MODIFIER||||470|LOC_Os11g05690|protein_coding|CODING|LOC_Os11g05690.1|3|1),INTRON(MODIFIER||||610|LOC_Os11g05690|protein_coding|CODING|LOC_Os11g05690.2|3|1),INTRON(MODIFIER||||483|LOC_Os11g05690|protein_coding|CODING|LOC_Os11g05690.3|2|1) FN409-S.SNP.11:2609676 chr11:002609676 0 W/2609676-2609676 FN409-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g05700 ABC transporter family protein, putative, expressed SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN2545-S.SNP.11:2612971 chr11:002612971 0 W/2612971-2612971 FN2545-S SNP G -> A AC=1;AN=198;BQB=0.754074;DP=4261;DP4=2049,2009,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.1527e-10;MQSB=0.894985;RPB=0.866932;SGB=58.1246;VDB=0.733685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.11:2616905 chr11:002616905 0 W/2616905-2616905 FN3536-S SNP G -> T AC=1;AN=188;BQB=0.589818;DP=2918;DP4=1382,1474,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.97794e-08;MQSB=0.914067;RPB=0.515861;SGB=50.1574;VDB=0.564153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.11:2617955 chr11:002617955 0 W/2617955-2617955 FN1258-S Single Base Substitution T-A INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. W427-1-1.SNP.11:2618712 chr11:002618712 0 W/2618712-2618712 W427-1-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g05710 expressed protein SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3967-S.SNP.11:2622729 chr11:002622729 0 W/2622729-2622729 FN3967-S SNP C -> T AC=1;AN=182;BQB=0.99614;DP=4258;DP4=1964,2177,9,21;HOB=6.03792e-05;ICB=0.000121422;MQ=28;MQ0F=0.0974636;MQB=0.360253;MQSB=1.98928e-08;RPB=0.869572;SGB=95.3123;VDB=0.904177;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y551|838|LOC_Os11g05720|protein_coding|CODING|LOC_Os11g05720.1|2|1) FN2438.SNP.11:2623691 chr11:002623691 0 W/2623691-2623691 FN2438 SNP C -> A AC=2;AN=200;BQB=0.154438;DP=5617;DP4=3133,2098,23,25;HOB=0.0198;ICB=0.495051;MQ=39;MQ0F=0.022966;MQB=0.0276474;MQSB=0;RPB=0.077829;SGB=162.845;VDB=0.158578;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.11:2625160 chr11:002625160 0 W/2625160-2625160 FN2426 SNP G -> T AC=1;AN=200;BQB=0.293692;DP=4904;DP4=2313,2350,20,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46958e-16;MQSB=0.831093;RPB=0.062779;SGB=-4.63785;VDB=0.84878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.11:2626387 chr11:002626387 0 W/2626387-2626387 FN2347 SNP G -> T AC=2;AN=192;BQB=0.787389;DP=4143;DP4=1948,1867,20,21;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.000241371;MQB=2.10234e-16;MQSB=0.000300233;RPB=0.149438;SGB=136.017;VDB=0.0353508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.11:2631017 chr11:002631017 0 W/2631017-2631017 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.255479;DP=3981;DP4=1896,2029,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.55874e-09;MQSB=0.989702;RPB=0.999539;SGB=-105.77;VDB=0.441205;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.11:2635674 chr11:002635674 0 W/2635674-2635674 FN621-S Single Base Substitution C-A INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN1520-S.SNP.11:2640177 chr11:002640177 0 W/2640177-2640177 FN1520-S Single Base Substitution G-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1658-S.SNP.11:2661505 chr11:002661505 0 W/2661505-2661505 FN1658-S SNP G -> A AC=2;AN=186;BQB=0.0084104;DP=3228;DP4=1461,1503,13,14;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.30494e-08;MQSB=0.433562;RPB=0.67218;SGB=-103.637;VDB=0.920444;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.11:2662960 chr11:002662960 0 W/2662960-2662960 FN3712-S SNP G -> A AC=1;AN=190;BQB=0.766571;DP=2751;DP4=1297,1359,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.51936e-06;MQSB=0.996817;RPB=0.969793;SGB=36.1006;VDB=0.884062;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.11:2663525 chr11:002663525 0 W/2663525-2663525 FN4140-S SNP G -> T AC=1;AN=170;BQB=0.761518;DP=2589;DP4=1372,1147,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.45543e-12;MQSB=0.971962;RPB=0.918877;SGB=78.9707;VDB=0.377978;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.11:2663526 chr11:002663526 0 W/2663526-2663526 FN4140-S SNP C -> T AC=1;AN=170;BQB=0.725603;DP=2591;DP4=1366,1153,10,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.94721e-13;MQSB=0.964583;RPB=0.895084;SGB=83.4133;VDB=0.309311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.11:2663970 chr11:002663970 0 W/2663970-2663970 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2209-S.SNP.11:2667814 chr11:002667814 0 W/2667814-2667814 FN2209-S SNP T -> A AC=1;AN=190;BQB=0.92475;DP=4747;DP4=2325,2136,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23523e-07;MQSB=0.996711;RPB=0.997852;SGB=36.1006;VDB=0.751396;EFF=INTERGENIC(MODIFIER||||||||||1) FN1075-S.SNP.11:2667818 chr11:002667818 0 W/2667818-2667818 FN1075-S Single Base Substitution A-G INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN870-S.SNP.11:2669183 chr11:002669183 0 W/2669183-2669183 FN870-S Single Base Substitution A-G INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN440-S.SNP.11:2676687 chr11:002676687 0 W/2676687-2676687 FN440-S Single Base Substitution C-G INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2546-S.SNP.11:2677973 chr11:002677973 0 W/2677973-2677973 FN2546-S SNP G -> A AC=1;AN=198;BQB=0.280507;DP=3832;DP4=1698,1862,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.42463e-06;MQSB=0.349144;RPB=0.653707;SGB=40.149;VDB=0.0600955;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V136I|337|LOC_Os11g05790|protein_coding|CODING|LOC_Os11g05790.1|1|1) FN2333.SNP.11:2680485 chr11:002680485 0 W/2680485-2680485 FN2333 SNP T -> A AC=1;AN=192;BQB=0.467363;DP=5301;DP4=2824,2156,6,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.51903e-10;MQSB=0.55903;RPB=0.86702;SGB=-11.3826;VDB=0.369477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.11:2684612 chr11:002684612 0 W/2684612-2684612 FN3598-S SNP T -> A AC=1;AN=188;BQB=1;DP=2686;DP4=1272,1326,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.22439e-06;MQSB=0.763249;RPB=0.424658;SGB=28.8977;VDB=0.54107;EFF=INTRON(MODIFIER||||217|LOC_Os11g05800|protein_coding|CODING|LOC_Os11g05800.1|4|1) FN2629-S.SNP.11:2686224 chr11:002686224 0 W/2686224-2686224 FN2629-S SNP C -> A AC=1;AN=200;BQB=0.944731;DP=4552;DP4=2274,2083,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.8454e-12;MQSB=0.764926;RPB=0.32714;SGB=39.9056;VDB=0.900481;EFF=INTRON(MODIFIER||||217|LOC_Os11g05800|protein_coding|CODING|LOC_Os11g05800.1|5|1) FN2442.SNP.11:2695504 chr11:002695504 0 W/2695504-2695504 FN2442 SNP G -> A AC=2;AN=200;BQB=0.99491;DP=4928;DP4=2340,2102,19,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.66271e-18;MQSB=0.46247;RPB=0.619108;SGB=146.368;VDB=0.0764176;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.11:2698674 chr11:002698674 0 W/2698674-2698674 FN2484 SNP G -> A AC=1;AN=200;BQB=0.751757;DP=4607;DP4=1831,2411,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.44447e-06;MQSB=0.857011;RPB=0.468459;SGB=35.8441;VDB=0.827164;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R576Q|845|LOC_Os11g05820|protein_coding|CODING|LOC_Os11g05820.1|2|1) FN2285.SNP.11:2698851 chr11:002698851 0 W/2698851-2698851 FN2285 SNP C -> T AC=1;AN=192;BQB=0.685622;DP=4927;DP4=2526,2127,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.83694e-11;MQSB=0.570267;RPB=0.67884;SGB=-10.2539;VDB=0.884327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T635I|845|LOC_Os11g05820|protein_coding|CODING|LOC_Os11g05820.1|2|1) FN-109.SNP.11:2700924 chr11:002700924 0 W/2700924-2700924 FN-109 Single Base Substitution A-G INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN462-S.SNP.11:2703765 chr11:002703765 0 W/2703765-2703765 FN462-S Single Base Substitution A-G INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN-103.SNP.11:2721140 chr11:002721140 0 W/2721140-2721140 FN-103 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g05840 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN-101.SNP.11:2723397 chr11:002723397 0 W/2723397-2723397 FN-101 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g05840 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2083-S.SNP.11:2724187 chr11:002724187 0 W/2724187-2724187 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.833762;DP=2237;DP4=1086,1074,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.13388e-06;MQSB=0.99558;RPB=0.321063;SGB=43.3113;VDB=0.729816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S30N|2340|LOC_Os11g05840|protein_coding|CODING|LOC_Os11g05840.1|1|1) FN4025-S.SNP.11:2724197 chr11:002724197 0 W/2724197-2724197 FN4025-S SNP C -> T AC=2;AN=168;BQB=0.998464;DP=2267;DP4=1089,1069,9,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.33254e-08;MQSB=0.975893;RPB=0.0520404;SGB=48.4712;VDB=0.554655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D27N|2340|LOC_Os11g05840|protein_coding|CODING|LOC_Os11g05840.1|1|1) FN3696-S.SNP.11:2728538 chr11:002728538 0 W/2728538-2728538 FN3696-S SNP T -> G AC=1;AN=190;BQB=0.287301;DP=2971;DP4=1370,1484,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.19849e-06;MQSB=0.996712;RPB=0.729267;SGB=21.1058;VDB=0.355325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.11:2737423 chr11:002737423 0 W/2737423-2737423 FN3525-S SNP G -> A AC=1;AN=188;BQB=0.997696;DP=2810;DP4=1276,1473,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.52246e-06;MQSB=0.982084;RPB=0.878683;SGB=35.3493;VDB=0.126223;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.11:2739679 chr11:002739679 0 W/2739679-2739679 FN1284-S Single Base Substitution T-C INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2765-S.SNP.11:2740387 chr11:002740387 0 W/2740387-2740387 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.814178;DP=2700;DP4=1694,829,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.39469e-08;MQSB=0.899205;RPB=0.881683;SGB=54.144;VDB=0.327707;EFF=INTERGENIC(MODIFIER||||||||||1) FN932-S.SNP.11:2746550 chr11:002746550 0 W/2746550-2746550 FN932-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN1496-S.SNP.11:2752517 chr11:002752517 0 W/2752517-2752517 FN1496-S Single Base Substitution G-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2791-S.SNP.11:2758408 chr11:002758408 0 W/2758408-2758408 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.987552;DP=4165;DP4=1865,2135,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.92554e-12;MQSB=0.968321;RPB=0.999932;SGB=12.5396;VDB=0.567935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.11:2758409 chr11:002758409 0 W/2758409-2758409 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.896488;DP=4178;DP4=1868,2117,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.19702e-12;MQSB=0.959403;RPB=0.992202;SGB=34.5346;VDB=0.314671;EFF=INTERGENIC(MODIFIER||||||||||1) FN-109.SNP.11:2760410 chr11:002760410 0 W/2760410-2760410 FN-109 Single Base Substitution G-A INTRON HOMO SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN3639-S.SNP.11:2763448 chr11:002763448 0 W/2763448-2763448 FN3639-S SNP A -> G AC=2;AN=190;BQB=0.989621;DP=2654;DP4=1343,1176,16,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.24963e-21;MQSB=0.932758;RPB=0.894551;SGB=39.8503;VDB=0.430536;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atC|I210|643|LOC_Os11g05880|protein_coding|CODING|LOC_Os11g05880.1|4|1) FN3817-S.SNP.11:2768701 chr11:002768701 0 W/2768701-2768701 FN3817-S SNP T -> G AC=1;AN=190;BQB=0.74786;DP=2851;DP4=1595,1144,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.268327;MQB=0.998885;MQSB=4.90459e-38;RPB=0.858424;SGB=-13.7759;VDB=0.183541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.11:2768880 chr11:002768880 0 W/2768880-2768880 FN3388-S SNP T -> G AC=1;AN=184;BQB=0.880709;DP=2743;DP4=1375,1288,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.0725483;MQB=0.225562;MQSB=0;RPB=0.525248;SGB=71.3514;VDB=0.70426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caG|H55Q|1084|LOC_Os11g05890|protein_coding|CODING|LOC_Os11g05890.1|1|1) FN989-S.SNP.11:2780423 chr11:002780423 0 W/2780423-2780423 FN989-S Single Base Substitution A-G INTRON HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1429-S.SNP.11:2780495 chr11:002780495 0 W/2780495-2780495 FN1429-S Single Base Substitution T-C INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-243.SNP.11:2789381 chr11:002789381 0 W/2789381-2789381 FN-243 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g05930 response regulator receiver domain containing protein, expressed SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN466-S.SNP.11:2807928 chr11:002807928 0 W/2807928-2807928 FN466-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g05950 expressed protein SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN3673-S.SNP.11:2808687 chr11:002808687 0 W/2808687-2808687 FN3673-S SNP G -> A AC=1;AN=190;BQB=0.915601;DP=2979;DP4=1357,1491,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.36506e-11;MQSB=0.712596;RPB=0.860157;SGB=71.8647;VDB=0.382109;EFF=INTERGENIC(MODIFIER||||||||||1) FN-386.SNP.11:2813867 chr11:002813867 0 W/2813867-2813867 FN-386 Single Base Substitution T-C INTERGENIC HET SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN4180-S.SNP.11:2819448 chr11:002819448 0 W/2819448-2819448 FN4180-S SNP G -> A AC=2;AN=170;BQB=0.952114;DP=2225;DP4=1040,1112,5,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.40887e-05;MQSB=0.994233;RPB=0.999767;SGB=38.987;VDB=0.09489;EFF=INTRON(MODIFIER||||736|LOC_Os11g05990|protein_coding|CODING|LOC_Os11g05990.1|1|1),INTRON(MODIFIER||||729|LOC_Os11g05990|protein_coding|CODING|LOC_Os11g05990.2|1|1) FN-63.SNP.11:2831986 chr11:002831986 0 W/2831986-2831986 FN-63 Single Base Substitution C-T INTERGENIC HOMO SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN3858-S.SNP.11:2858468 chr11:002858468 0 W/2858468-2858468 FN3858-S SNP G -> A AC=1;AN=158;BQB=0.988348;DP=2382;DP4=1007,1254,6,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.73601e-12;MQSB=0.999999;RPB=0.992074;SGB=30.927;VDB=0.106754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3411-S.SNP.11:2863494 chr11:002863494 0 W/2863494-2863494 FN3411-S SNP A -> G AC=2;AN=184;BQB=0.970276;DP=2925;DP4=1368,1406,20,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.06325e-16;MQSB=0.8696;RPB=0.928571;SGB=95.6183;VDB=0.778779;EFF=INTRON(MODIFIER||||1077|LOC_Os11g06040|protein_coding|CODING|LOC_Os11g06040.1|12|1),INTRON(MODIFIER||||900|LOC_Os11g06040|protein_coding|CODING|LOC_Os11g06040.2|12|1),INTRON(MODIFIER||||900|LOC_Os11g06040|protein_coding|CODING|LOC_Os11g06040.3|12|1) FN-241.SNP.11:2882704 chr11:002882704 0 W/2882704-2882704 FN-241 Single Base Substitution C-A INTERGENIC HET SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN2477.SNP.11:2886537 chr11:002886537 0 W/2886537-2886537 FN2477 SNP C -> T AC=1;AN=200;BQB=0.746624;DP=4630;DP4=2085,2016,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.53495e-05;MQSB=0.816216;RPB=0.664535;SGB=-14.3206;VDB=0.0409749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.11:2888584 chr11:002888584 0 W/2888584-2888584 FN2553-S SNP G -> A AC=2;AN=198;BQB=0.0981875;DP=3945;DP4=1798,1951,15,8;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0;MQB=1.50911e-08;MQSB=0.710214;RPB=0.817695;SGB=44.9151;VDB=0.426775;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.11:2894178 chr11:002894178 0 W/2894178-2894178 FN2169-S SNP A -> G AC=2;AN=168;BQB=0.1735;DP=2998;DP4=1023,1932,10,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.3773e-11;MQSB=0.984675;RPB=1;SGB=22.7913;VDB=0.958761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3707-S.SNP.11:2899426 chr11:002899426 0 W/2899426-2899426 FN3707-S SNP C -> T AC=2;AN=190;BQB=0.903059;DP=2828;DP4=1259,1409,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.87599e-14;MQSB=0.999061;RPB=0.35456;SGB=49.1985;VDB=0.825073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M166I|201|LOC_Os11g06080|protein_coding|CODING|LOC_Os11g06080.1|3|1) FN1480-S.SNP.11:2909937 chr11:002909937 0 W/2909937-2909937 FN1480-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN799-S.SNP.11:2914035 chr11:002914035 0 W/2914035-2914035 FN799-S Single Base Substitution A-G INTRON HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN3698-S.SNP.11:2916724 chr11:002916724 0 W/2916724-2916724 FN3698-S SNP C -> A AC=1;AN=190;BQB=0.880898;DP=2706;DP4=1463,1136,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.50174e-06;MQSB=0.970249;RPB=0.997885;SGB=53.6492;VDB=0.804235;EFF=INTRON(MODIFIER||||235|LOC_Os11g06130|protein_coding|CODING|LOC_Os11g06130.4|1|1),INTRON(MODIFIER||||631|LOC_Os11g06130|protein_coding|CODING|LOC_Os11g06130.2|1|1),INTRON(MODIFIER||||688|LOC_Os11g06130|protein_coding|CODING|LOC_Os11g06130.1|1|1),INTRON(MODIFIER||||267|LOC_Os11g06130|protein_coding|CODING|LOC_Os11g06130.3|1|1) FN2245-S.SNP.11:2934233 chr11:002934233 0 W/2934233-2934233 FN2245-S SNP A -> T AC=1;AN=190;BQB=0.783565;DP=4662;DP4=2400,1982,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.0394e-07;MQSB=0.825528;RPB=0.254146;SGB=43.2083;VDB=0.466689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.11:2937727 chr11:002937727 0 W/2937727-2937727 FN2698-S SNP T -> A AC=1;AN=200;BQB=0.923593;DP=4658;DP4=2298,2193,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.02116e-09;MQSB=0.999678;RPB=0.414179;SGB=51.0851;VDB=0.828942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.11:2942796 chr11:002942796 0 W/2942796-2942796 FN2198-S SNP A -> G AC=1;AN=190;BQB=0.359989;DP=4831;DP4=2365,2093,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59726e-09;MQSB=0.954939;RPB=0.998624;SGB=43.2083;VDB=0.706974;EFF=UTR_3_PRIME(MODIFIER||2471||236|LOC_Os11g06170|protein_coding|CODING|LOC_Os11g06170.1|3|1),UTR_3_PRIME(MODIFIER||241||200|LOC_Os11g06170|protein_coding|CODING|LOC_Os11g06170.2|4|1) FN2554-S.SNP.11:2945540 chr11:002945540 0 W/2945540-2945540 FN2554-S SNP C -> T AC=1;AN=198;BQB=0.143744;DP=4429;DP4=2086,1795,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00722511;MQB=3.92573e-07;MQSB=0.0591295;RPB=0.993771;SGB=-148.215;VDB=0.992463;EFF=INTERGENIC(MODIFIER||||||||||1) FN497-S.SNP.11:2948516 chr11:002948516 0 W/2948516-2948516 FN497-S Single Base Substitution G-A INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN-384.SNP.11:2948812 chr11:002948812 0 W/2948812-2948812 FN-384 Single Base Substitution G-T INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN485-S.SNP.11:2955006 chr11:002955006 0 W/2955006-2955006 FN485-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g06190 expressed protein SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN689-S.SNP.11:2959153 chr11:002959153 0 W/2959153-2959153 FN689-S Single Base Substitution G-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN689-S.SNP.11:2959154 chr11:002959154 0 W/2959154-2959154 FN689-S Single Base Substitution G-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN678-S.SNP.11:2961709 chr11:002961709 0 W/2961709-2961709 FN678-S Single Base Substitution T-A INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN1688-S.SNP.11:2964000 chr11:002964000 0 W/2964000-2964000 FN1688-S SNP G -> A AC=1;AN=188;BQB=0.310166;DP=4000;DP4=2153,1801,16,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.34639e-18;MQSB=0.968143;RPB=0.960995;SGB=-83.7531;VDB=0.635794;EFF=INTRON(MODIFIER||||295|LOC_Os11g06200|protein_coding|CODING|LOC_Os11g06200.1|4|1) FN2792-S.SNP.11:2973399 chr11:002973399 0 W/2973399-2973399 FN2792-S SNP G -> C AC=1;AN=198;BQB=0.497511;DP=4309;DP4=2222,1874,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.2281e-09;MQSB=0.00364239;RPB=0.88884;SGB=9.3494;VDB=0.0758628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A268P|486|LOC_Os11g06220|protein_coding|CODING|LOC_Os11g06220.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A268P|486|LOC_Os11g06220|protein_coding|CODING|LOC_Os11g06220.1|2|1) FN2676-S.SNP.11:2977200 chr11:002977200 0 W/2977200-2977200 FN2676-S SNP T -> A AC=1;AN=200;BQB=0.931634;DP=4946;DP4=2151,2457,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.36819e-06;MQSB=0.95799;RPB=0.712609;SGB=45.0543;VDB=0.878089;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.11:3013525 chr11:003013525 0 W/3013525-3013525 FN633-S Single Base Substitution G-A INTRON HOMO SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3572-S.SNP.11:3014996 chr11:003014996 0 W/3014996-3014996 FN3572-S SNP G -> C AC=2;AN=188;BQB=0.618945;DP=2964;DP4=1464,1426,15,14;HOB=0.0210502;ICB=0.494738;MQ=40;MQ0F=0.0482456;MQB=0.000430478;MQSB=0.0292243;RPB=0.443024;SGB=92.677;VDB=0.480477;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T457S|1460|LOC_Os11g06280|protein_coding|CODING|LOC_Os11g06280.1|2|1) FN3445-S.SNP.11:3015969 chr11:003015969 0 W/3015969-3015969 FN3445-S SNP T -> C AC=2;AN=184;BQB=0.923602;DP=3085;DP4=1670,1331,13,6;HOB=0.0215028;ICB=0.494625;MQ=28;MQ0F=0.0982172;MQB=0.129951;MQSB=8.09216e-32;RPB=0.124161;SGB=56.8786;VDB=0.0349496;EFF=INTRON(MODIFIER||||1460|LOC_Os11g06280|protein_coding|CODING|LOC_Os11g06280.1|1|1) FN2290.SNP.11:3016767 chr11:003016767 0 W/3016767-3016767 FN2290 SNP C -> T AC=2;AN=192;BQB=0.974311;DP=5492;DP4=2625,2549,26,30;HOB=0.0206163;ICB=0.494846;MQ=11;MQ0F=0.484705;MQB=0.0154157;MQSB=0;RPB=0.55305;SGB=68.3644;VDB=0.434932;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G14R|1460|LOC_Os11g06280|protein_coding|CODING|LOC_Os11g06280.1|1|1) FN3749-S.SNP.11:3019016 chr11:003019016 0 W/3019016-3019016 FN3749-S SNP C -> T AC=2;AN=190;BQB=0.583568;DP=1948;DP4=985,870,9,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.47241e-07;MQSB=0.328273;RPB=0.706886;SGB=53.8699;VDB=0.139868;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.11:3019607 chr11:003019607 0 W/3019607-3019607 FN2540-S SNP C -> T AC=2;AN=198;BQB=0.92949;DP=4329;DP4=2244,1784,17,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.33316e-19;MQSB=0.8171;RPB=0.792116;SGB=164.427;VDB=0.0609504;EFF=UTR_5_PRIME(MODIFIER||1164||448|LOC_Os11g06290|protein_coding|CODING|LOC_Os11g06290.1|1|1) FN3879-S.SNP.11:3052022 chr11:003052022 0 W/3052022-3052022 FN3879-S SNP C -> T AC=1;AN=158;BQB=0.635265;DP=2086;DP4=735,1254,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.69735e-05;MQSB=0.783291;RPB=0.596706;SGB=42.6978;VDB=0.637461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.11:3053068 chr11:003053068 0 W/3053068-3053068 FN1136-19-S Single Base Substitution G-A INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1210-S.SNP.11:3053934 chr11:003053934 0 W/3053934-3053934 FN1210-S Single Base Substitution T-G INTERGENIC HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN1212-S.SNP.11:3057724 chr11:003057724 0 W/3057724-3057724 FN1212-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3463-S.SNP.11:3060418 chr11:003060418 0 W/3060418-3060418 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.686006;DP=2588;DP4=1245,1268,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000486536;MQSB=0.419733;RPB=0.997999;SGB=39.699;VDB=0.967056;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.11:3067878 chr11:003067878 0 W/3067878-3067878 FN-189 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g06380 transposon protein, putative, unclassified, expressed SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3779-S.SNP.11:3078259 chr11:003078259 0 W/3078259-3078259 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.853346;DP=2517;DP4=1331,1068,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.23479e-13;MQSB=0.996955;RPB=0.580691;SGB=90.0802;VDB=0.349815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.11:3078664 chr11:003078664 0 W/3078664-3078664 FN3848-S SNP C -> A AC=1;AN=158;BQB=0.995893;DP=2529;DP4=1166,1177,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.51377e-05;MQSB=0.778787;RPB=0.905171;SGB=38.3284;VDB=0.0316915;EFF=INTERGENIC(MODIFIER||||||||||1) FN759-S.SNP.11:3081606 chr11:003081606 0 W/3081606-3081606 FN759-S Single Base Substitution C-A INTRON HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN759-S.SNP.11:3081607 chr11:003081607 0 W/3081607-3081607 FN759-S Single Base Substitution A-T INTRON HET SNo: 681, Mutant_ID: FN759-S, Generation: M2, Mutations: 53, Genes: 43, Seed availability: Yes. FN3437-S.SNP.11:3091260 chr11:003091260 0 W/3091260-3091260 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.994251;DP=2619;DP4=1378,1156,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.54421e-07;MQSB=0.804135;RPB=0.937269;SGB=35.7479;VDB=0.444671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.11:3093856 chr11:003093856 0 W/3093856-3093856 FN2479 SNP T -> G AC=1;AN=200;BQB=0.345123;DP=4553;DP4=2129,2081,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.60556e-17;MQSB=0.851314;RPB=0.879084;SGB=-208.054;VDB=0.90289;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D137E|483|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D137E|483|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaG|D89E|435|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.3|2|1) FN4158-S.SNP.11:3095103 chr11:003095103 0 W/3095103-3095103 FN4158-S SNP G -> T AC=1;AN=170;BQB=0.949156;DP=2448;DP4=1289,1110,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.71625e-07;MQSB=0.904853;RPB=0.995882;SGB=52.3148;VDB=0.236092;EFF=INTRON(MODIFIER||||483|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.1|2|1),INTRON(MODIFIER||||483|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.2|3|1),INTRON(MODIFIER||||435|LOC_Os11g06410|protein_coding|CODING|LOC_Os11g06410.3|2|1) FN2251-S.SNP.11:3099524 chr11:003099524 0 W/3099524-3099524 FN2251-S SNP T -> A AC=2;AN=190;BQB=0.976311;DP=4627;DP4=2057,2155,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000216123;MQB=1.90071e-17;MQSB=0.669615;RPB=0.990462;SGB=67.0756;VDB=0.639342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I108N|440|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.1|2|1),UTR_5_PRIME(MODIFIER||240||317|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.2|2|1) FN2251-S.SNP.11:3099525 chr11:003099525 0 W/3099525-3099525 FN2251-S SNP C -> A AC=2;AN=190;BQB=0.878976;DP=4624;DP4=2099,2152,10,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000216263;MQB=3.96422e-19;MQSB=0.717134;RPB=0.737788;SGB=100.07;VDB=0.454017;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I108|440|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.1|2|1),UTR_5_PRIME(MODIFIER||239||317|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.2|2|1) FN2345.SNP.11:3102601 chr11:003102601 0 W/3102601-3102601 FN2345 SNP G -> C AC=2;AN=192;BQB=0.997879;DP=5327;DP4=2669,2226,42,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.86633e-39;MQSB=0.974023;RPB=0.501166;SGB=90.2653;VDB=0.595687;EFF=UTR_3_PRIME(MODIFIER||279||440|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.1|5|1),UTR_3_PRIME(MODIFIER||279||317|LOC_Os11g06420|protein_coding|CODING|LOC_Os11g06420.2|5|1) FN446-S.SNP.11:3105050 chr11:003105050 0 W/3105050-3105050 FN446-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g06430 hypothetical protein SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN2649-S.SNP.11:3108154 chr11:003108154 0 W/3108154-3108154 FN2649-S SNP C -> A AC=1;AN=200;BQB=0.773794;DP=5243;DP4=2613,2314,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.11532e-11;MQSB=0.998815;RPB=0.873966;SGB=29.4849;VDB=0.881939;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.11:3109216 chr11:003109216 0 W/3109216-3109216 FN2475 SNP G -> A AC=2;AN=200;BQB=0.921081;DP=3925;DP4=1826,1797,13,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.59267e-14;MQSB=0.946117;RPB=0.974704;SGB=79.9264;VDB=0.107374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.11:3113673 chr11:003113673 0 W/3113673-3113673 FN2302 SNP G -> A AC=2;AN=192;BQB=0.985127;DP=4950;DP4=2341,2309,25,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.10759e-32;MQSB=0.853394;RPB=0.747666;SGB=141.745;VDB=0.867591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A74V|169|LOC_Os11g06450|protein_coding|CODING|LOC_Os11g06450.1|1|1) FN4132-S.SNP.11:3120421 chr11:003120421 0 W/3120421-3120421 FN4132-S SNP T -> G AC=2;AN=182;BQB=0.944758;DP=1732;DP4=456,1209,4,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.32197e-06;MQSB=0.859939;RPB=0.936391;SGB=48.6223;VDB=0.130558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.11:3124308 chr11:003124308 0 W/3124308-3124308 FN2753-S SNP G -> T AC=2;AN=200;BQB=0.962859;DP=4629;DP4=2087,2259,13,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.299e-20;MQSB=0.906883;RPB=0.521125;SGB=105.163;VDB=0.0785848;EFF=INTERGENIC(MODIFIER||||||||||1) FN-139.SNP.11:3128420 chr11:003128420 0 W/3128420-3128420 FN-139 Single Base Substitution G-A INTRON HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN2715-S.SNP.11:3134868 chr11:003134868 0 W/3134868-3134868 FN2715-S SNP C -> T AC=1;AN=200;BQB=0.526681;DP=5060;DP4=2587,2201,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10969e-15;MQSB=0.991406;RPB=0.813661;SGB=63.3521;VDB=0.460945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.11:3150644 chr11:003150644 0 W/3150644-3150644 FN2461 SNP C -> T AC=1;AN=200;BQB=0.863267;DP=4620;DP4=2439,1965,19,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.39505e-15;MQSB=0.835694;RPB=0.99767;SGB=123.342;VDB=0.649159;EFF=INTRON(MODIFIER||||101|LOC_Os11g06530|protein_coding|CODING|LOC_Os11g06530.1|1|1) FN3297-S.SNP.11:3154140 chr11:003154140 0 W/3154140-3154140 FN3297-S SNP G -> A AC=1;AN=184;BQB=0.599472;DP=3221;DP4=1346,1656,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.51219e-08;MQSB=0.921948;RPB=0.233733;SGB=6.80232;VDB=0.370685;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.11:3155535 chr11:003155535 0 W/3155535-3155535 FN-159 Single Base Substitution C-T INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2407.SNP.11:3155859 chr11:003155859 0 W/3155859-3155859 FN2407 SNP T -> A AC=2;AN=200;BQB=0.713087;DP=5180;DP4=2414,2537,30,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.4875e-34;MQSB=0.682258;RPB=0.731601;SGB=261.497;VDB=0.994323;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.11:3157220 chr11:003157220 0 W/3157220-3157220 FN3440-S SNP T -> A AC=2;AN=184;BQB=0.0768296;DP=2545;DP4=1275,1168,12,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.63753e-12;MQSB=0.996704;RPB=0.388314;SGB=71.1891;VDB=0.200891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.11:3157560 chr11:003157560 0 W/3157560-3157560 FN1094-S Single Base Substitution G-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2301.SNP.11:3158018 chr11:003158018 0 W/3158018-3158018 FN2301 SNP C -> G AC=1;AN=192;BQB=0.8775;DP=4650;DP4=2073,2193,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215054;MQB=1.00752e-06;MQSB=0.541084;RPB=0.965677;SGB=44.6462;VDB=0.231252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.11:3158427 chr11:003158427 0 W/3158427-3158427 FN3657-S SNP A -> G AC=1;AN=190;BQB=0.192203;DP=2584;DP4=1434,1038,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41979e-06;MQSB=0.591512;RPB=0.983655;SGB=33.8752;VDB=0.711627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.11:3158507 chr11:003158507 0 W/3158507-3158507 FN2600-S SNP G -> T AC=1;AN=198;BQB=0.999908;DP=4066;DP4=1960,1922,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.06017e-08;MQSB=0.99731;RPB=0.855177;SGB=31.9395;VDB=0.949421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.11:3159601 chr11:003159601 0 W/3159601-3159601 FN1506-S Single Base Substitution G-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3770-S.SNP.11:3159913 chr11:003159913 0 W/3159913-3159913 FN3770-S SNP T -> C AC=2;AN=190;BQB=0.9101;DP=2724;DP4=1195,1419,10,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.19059e-14;MQSB=0.979049;RPB=0.303907;SGB=99.1879;VDB=0.749399;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R62|2505|LOC_Os11g06570|protein_coding|CODING|LOC_Os11g06570.1|1|1) FN-222.SNP.11:3160972 chr11:003160972 0 W/3160972-3160972 FN-222 Single Base Substitution T-A INTRON HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN3555-S.SNP.11:3160972 chr11:003160972 0 W/3160972-3160972 FN3555-S SNP T -> A AC=2;AN=188;BQB=0.822868;DP=2244;DP4=982,1156,5,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=8.57277e-11;MQSB=0.165984;RPB=0.616749;SGB=51.5091;VDB=0.266316;EFF=INTRON(MODIFIER||||2505|LOC_Os11g06570|protein_coding|CODING|LOC_Os11g06570.1|2|1) FN2210-S.SNP.11:3161402 chr11:003161402 0 W/3161402-3161402 FN2210-S SNP G -> T AC=2;AN=190;BQB=0.770113;DP=4898;DP4=2478,2047,16,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204165;MQB=5.22791e-18;MQSB=0.993481;RPB=0.846936;SGB=121.957;VDB=0.274647;EFF=INTRON(MODIFIER||||2505|LOC_Os11g06570|protein_coding|CODING|LOC_Os11g06570.1|2|1) FN2210-S.SNP.11:3161404 chr11:003161404 0 W/3161404-3161404 FN2210-S SNP C -> T AC=2;AN=190;BQB=0.751417;DP=4887;DP4=2531,2052,16,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204625;MQB=3.15547e-19;MQSB=0.999967;RPB=0.936324;SGB=96.5165;VDB=0.320698;EFF=INTRON(MODIFIER||||2505|LOC_Os11g06570|protein_coding|CODING|LOC_Os11g06570.1|2|1) FN2674-S.SNP.11:3174478 chr11:003174478 0 W/3174478-3174478 FN2674-S SNP A -> G AC=2;AN=200;BQB=0.65352;DP=5166;DP4=2303,2614,23,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.23542e-31;MQSB=0.949688;RPB=0.626976;SGB=224.656;VDB=0.145421;EFF=INTRON(MODIFIER||||2505|LOC_Os11g06570|protein_coding|CODING|LOC_Os11g06570.1|12|1) FN3110-S.SNP.11:3178215 chr11:003178215 0 W/3178215-3178215 FN3110-S SNP T -> C AC=2;AN=184;BQB=0.99144;DP=2702;DP4=1379,1180,22,20;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=7.12952e-17;MQSB=0.86273;RPB=0.691814;SGB=178.936;VDB=0.654903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-194.SNP.11:3188762 chr11:003188762 0 W/3188762-3188762 FN-194 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g06600 retrotransposon protein, putative, unclassified, expressed SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1282-S.SNP.11:3188762 chr11:003188762 0 W/3188762-3188762 FN1282-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g06600 retrotransposon protein, putative, unclassified, expressed SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN_1017-1.SNP.11:3188762 chr11:003188762 0 W/3188762-3188762 FN_1017-1 Single Base Substitution C-A Homo LOC_Os11g06600 retrotransposon protein, putative, unclassified, expressed SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN1084-S.SNP.11:3197493 chr11:003197493 0 W/3197493-3197493 FN1084-S Single Base Substitution T-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3838-S.SNP.11:3197898 chr11:003197898 0 W/3197898-3197898 FN3838-S SNP G -> T AC=1;AN=190;BQB=0.379304;DP=2396;DP4=1162,1048,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.79594e-05;MQSB=0.994616;RPB=0.46916;SGB=8.33661;VDB=0.265581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.11:3212600 chr11:003212600 0 W/3212600-3212600 FN1631-S Single Base Substitution C-A INTERGENIC Homo SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1334-S.SNP.11:3230037 chr11:003230037 0 W/3230037-3230037 FN1334-S Single Base Substitution C-T INTERGENIC HET SNo: 1135, Mutant_ID: FN1334-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2204-S.SNP.11:3237978 chr11:003237978 0 W/3237978-3237978 FN2204-S SNP T -> A AC=1;AN=190;BQB=0.272456;DP=4653;DP4=1820,2516,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.42401e-14;MQSB=0.926876;RPB=0.946638;SGB=-6.57546;VDB=0.403847;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.11:3239532 chr11:003239532 0 W/3239532-3239532 FN988-S Single Base Substitution G-A INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3765-S.SNP.11:3261840 chr11:003261840 0 W/3261840-3261840 FN3765-S SNP A -> G AC=1;AN=190;BQB=0.369083;DP=2613;DP4=1236,863,14,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.95301e-13;MQSB=0.71961;RPB=0.322904;SGB=-88.0857;VDB=0.986824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.11:3267230 chr11:003267230 0 W/3267230-3267230 FN2252-S SNP G -> C AC=1;AN=190;BQB=0.886384;DP=3191;DP4=1178,1677,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000112323;MQSB=0.000716528;RPB=0.870924;SGB=2.55724;VDB=0.736899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Ccc|A368P|692|LOC_Os11g06700|protein_coding|CODING|LOC_Os11g06700.1|1|1) FN2708-S.SNP.11:3272416 chr11:003272416 0 W/3272416-3272416 FN2708-S SNP A -> G AC=1;AN=200;BQB=0.482016;DP=4929;DP4=2387,2258,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95856e-11;MQSB=0.921301;RPB=0.949869;SGB=19.1209;VDB=0.441722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.11:3272749 chr11:003272749 0 W/3272749-3272749 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.968335;DP=3019;DP4=1487,1457,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.59872e-05;MQSB=0.846763;RPB=0.0336716;SGB=28.8977;VDB=0.118261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.11:3274761 chr11:003274761 0 W/3274761-3274761 FN1514-S Single Base Substitution G-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1231-S.SNP.11:3274872 chr11:003274872 0 W/3274872-3274872 FN1231-S Single Base Substitution G-A INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN2152-S.SNP.11:3282349 chr11:003282349 0 W/3282349-3282349 FN2152-S SNP T -> C AC=1;AN=168;BQB=0.00198347;DP=4115;DP4=2042,1974,9,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.76818e-06;MQSB=0.894759;RPB=0.536603;SGB=-144.333;VDB=0.0387837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1367-S.SNP.11:3286240 chr11:003286240 0 W/3286240-3286240 FN1367-S Single Base Substitution T-C INTERGENIC Homo SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN712-S.SNP.11:3303753 chr11:003303753 0 W/3303753-3303753 FN712-S Single Base Substitution A-T INTERGENIC HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3452-S.SNP.11:3304813 chr11:003304813 0 W/3304813-3304813 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.999988;DP=3299;DP4=1683,1348,9,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.46942e-09;MQSB=0.0239161;RPB=0.909685;SGB=43.4494;VDB=0.241825;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.11:3319195 chr11:003319195 0 W/3319195-3319195 FN850-S Single Base Substitution C-T INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN4066-S.SNP.11:3320032 chr11:003320032 0 W/3320032-3320032 FN4066-S SNP A -> T AC=2;AN=168;BQB=0.761896;DP=2517;DP4=1269,1066,15,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.51941e-17;MQSB=0.990313;RPB=0.993877;SGB=82.7794;VDB=0.693162;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.11:3320033 chr11:003320033 0 W/3320033-3320033 FN4066-S SNP C -> T AC=2;AN=168;BQB=0.999777;DP=2530;DP4=1294,1127,17,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.47235e-17;MQSB=0.978326;RPB=0.996623;SGB=123.066;VDB=0.626096;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.11:3326246 chr11:003326246 0 W/3326246-3326246 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.668647;DP=3068;DP4=1715,1294,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.99973e-07;MQSB=0.93995;RPB=0.759741;SGB=10.8165;VDB=0.0495969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.11:3326429 chr11:003326429 0 W/3326429-3326429 FN1400-S Single Base Substitution C-T INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1419-S.SNP.11:3333639 chr11:003333639 0 W/3333639-3333639 FN1419-S Single Base Substitution T-G INTRON HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2146-S.SNP.11:3336105 chr11:003336105 0 W/3336105-3336105 FN2146-S SNP C -> G AC=1;AN=168;BQB=0.00149577;DP=3887;DP4=1993,1851,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.93566e-08;MQSB=0.994486;RPB=0.733859;SGB=-98.0622;VDB=0.989005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P491R|862|LOC_Os11g06810|protein_coding|CODING|LOC_Os11g06810.1|5|1) FN1204-S.SNP.11:3337290 chr11:003337290 0 W/3337290-3337290 FN1204-S Single Base Substitution A-T INTRON HOMO SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2649-S.SNP.11:3345895 chr11:003345895 0 W/3345895-3345895 FN2649-S SNP T -> G AC=1;AN=200;BQB=0.938591;DP=4675;DP4=2144,2331,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.80227e-15;MQSB=0.902548;RPB=0.997266;SGB=60.747;VDB=0.270686;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.11:3354420 chr11:003354420 0 W/3354420-3354420 FN493-S Single Base Substitution T-A INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2498.SNP.11:3356001 chr11:003356001 0 W/3356001-3356001 FN2498 SNP A -> T AC=1;AN=200;BQB=0.13914;DP=4805;DP4=2494,1900,15,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.2718e-14;MQSB=0.553251;RPB=0.997835;SGB=97.9523;VDB=0.68629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2258-S.SNP.11:3356616 chr11:003356616 0 W/3356616-3356616 FN2258-S SNP A -> T AC=1;AN=190;BQB=0.999724;DP=5149;DP4=2715,2146,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000194212;MQB=3.85514e-11;MQSB=0.800423;RPB=0.67376;SGB=68.0854;VDB=0.73529;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.11:3358717 chr11:003358717 0 W/3358717-3358717 FN833-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1335-S.SNP.11:3365538 chr11:003365538 0 W/3365538-3365538 FN1335-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3815-S.SNP.11:3367899 chr11:003367899 0 W/3367899-3367899 FN3815-S SNP G -> C AC=1;AN=190;BQB=0.823653;DP=3263;DP4=1655,1488,13,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.71271e-16;MQSB=0.980309;RPB=0.423304;SGB=108.296;VDB=0.18737;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Gca|P317A|428|LOC_Os11g06860|protein_coding|CODING|LOC_Os11g06860.1|1|1) FN3476-S.SNP.11:3384110 chr11:003384110 0 W/3384110-3384110 FN3476-S SNP T -> A AC=2;AN=184;BQB=0.985029;DP=3109;DP4=1431,1485,16,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.34958e-22;MQSB=0.993671;RPB=0.615791;SGB=184.396;VDB=0.054753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ttc|I432F|651|LOC_Os11g06900|protein_coding|CODING|LOC_Os11g06900.1|12|1) FN4149-S.SNP.11:3393254 chr11:003393254 0 W/3393254-3393254 FN4149-S SNP C -> A AC=2;AN=170;BQB=0.860519;DP=2703;DP4=1309,1309,14,21;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.57759e-21;MQSB=0.99911;RPB=0.050837;SGB=150.053;VDB=0.217753;EFF=INTRON(MODIFIER||||901|LOC_Os11g06910|protein_coding|CODING|LOC_Os11g06910.1|2|1),INTRON(MODIFIER||||901|LOC_Os11g06910|protein_coding|CODING|LOC_Os11g06910.2|2|1),INTRON(MODIFIER||||821|LOC_Os11g06910|protein_coding|CODING|LOC_Os11g06910.3|2|1) FN2370.SNP.11:3396124 chr11:003396124 0 W/3396124-3396124 FN2370 SNP G -> A AC=1;AN=192;BQB=0.439868;DP=5115;DP4=2245,2487,12,22;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=5.90342e-11;MQSB=0.157686;RPB=0.772646;SGB=-4.61041;VDB=0.945793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.11:3418843 chr11:003418843 0 W/3418843-3418843 FN2335 SNP T -> C AC=1;AN=192;BQB=0.999907;DP=4967;DP4=2370,2272,22,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.05109e-16;MQSB=0.879403;RPB=0.997128;SGB=-40.5556;VDB=0.988149;EFF=UTR_3_PRIME(MODIFIER||250||560|LOC_Os11g06930|protein_coding|CODING|LOC_Os11g06930.1|14|1) FN541-S.SNP.11:3424486 chr11:003424486 0 W/3424486-3424486 FN541-S Single Base Substitution C-T INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN874-S.SNP.11:3430711 chr11:003430711 0 W/3430711-3430711 FN874-S Single Base Substitution T-C INTRON HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN1219-S.SNP.11:3433428 chr11:003433428 0 W/3433428-3433428 FN1219-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2252-S.SNP.11:3438733 chr11:003438733 0 W/3438733-3438733 FN2252-S SNP C -> G AC=1;AN=190;BQB=0.999027;DP=3446;DP4=1274,1733,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.88485e-05;MQSB=6.85923e-05;RPB=0.743147;SGB=15.9981;VDB=0.730534;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.11:3438951 chr11:003438951 0 W/3438951-3438951 FN2092-S SNP G -> A AC=1;AN=168;BQB=0.287934;DP=3968;DP4=1994,1879,19,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.02667e-13;MQSB=0.425411;RPB=0.0811731;SGB=-266.874;VDB=0.223082;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.11:3439128 chr11:003439128 0 W/3439128-3439128 FN1394-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN4302-S.SNP.11:3439669 chr11:003439669 0 W/3439669-3439669 FN4302-S SNP G -> A AC=1;AN=170;BQB=0.997285;DP=2375;DP4=1176,1145,7,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.30922e-05;MQSB=0.732422;RPB=0.580914;SGB=30.1021;VDB=0.13615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4302-S.SNP.11:3439670 chr11:003439670 0 W/3439670-3439670 FN4302-S SNP T -> A AC=1;AN=170;BQB=0.886659;DP=2379;DP4=1182,1133,8,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.02764e-06;MQSB=0.763595;RPB=0.856097;SGB=21.1076;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.11:3442033 chr11:003442033 0 W/3442033-3442033 FN1640-S Single Base Substitution T-C INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1057-S.SNP.11:3444785 chr11:003444785 0 W/3444785-3444785 FN1057-S Single Base Substitution T-C INTERGENIC HOMO SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3651-S.SNP.11:3444785 chr11:003444785 0 W/3444785-3444785 FN3651-S SNP T -> C AC=2;AN=190;BQB=0.955468;DP=2602;DP4=1269,1238,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.15522e-11;MQSB=0.990427;RPB=0.924195;SGB=36.4291;VDB=0.685185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.11:3444785 chr11:003444785 0 W/3444785-3444785 FN3837-S SNP T -> C AC=2;AN=190;BQB=0.903378;DP=2197;DP4=1007,1108,7,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.34745e-08;MQSB=0.988839;RPB=0.998573;SGB=58.2031;VDB=0.980622;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.11:3444785 chr11:003444785 0 W/3444785-3444785 FN4010-S SNP T -> C AC=1;AN=168;BQB=0.663893;DP=2212;DP4=1077,1051,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.55315e-05;MQSB=0.985056;RPB=0.47867;SGB=47.7421;VDB=0.217648;EFF=INTERGENIC(MODIFIER||||||||||1) FN837-S.SNP.11:3446751 chr11:003446751 0 W/3446751-3446751 FN837-S Single Base Substitution G-A INTERGENIC HET SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN-226.SNP.11:3447166 chr11:003447166 0 W/3447166-3447166 FN-226 Single Base Substitution C-G INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-278.SNP.11:3455944 chr11:003455944 0 W/3455944-3455944 FN-278 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN1061-S.SNP.11:3458495 chr11:003458495 0 W/3458495-3458495 FN1061-S Single Base Substitution C-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN994-S.SNP.11:3463905 chr11:003463905 0 W/3463905-3463905 FN994-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 897, Mutant_ID: FN994-S, Generation: M2, Mutations: 41, Genes: 17, Seed availability: Yes. FN-344.SNP.11:3473205 chr11:003473205 0 W/3473205-3473205 FN-344 Single Base Substitution T-C INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. W450-6-1.SNP.11:3477220 chr11:003477220 0 W/3477220-3477220 W450-6-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g06990 expressed protein SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2241-S.SNP.11:3482072 chr11:003482072 0 W/3482072-3482072 FN2241-S SNP C -> T AC=1;AN=190;BQB=0.877415;DP=3710;DP4=2311,1125,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59383e-10;MQSB=0.825973;RPB=0.992519;SGB=50.3161;VDB=0.945428;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.11:3487904 chr11:003487904 0 W/3487904-3487904 FN404-S Single Base Substitution T-C INTERGENIC HOMO SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN2172-S.SNP.11:3494314 chr11:003494314 0 W/3494314-3494314 FN2172-S SNP G -> C AC=1;AN=168;BQB=0.452383;DP=1585;DP4=566,971,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000910924;MQSB=0.255689;RPB=0.876726;SGB=21.0249;VDB=0.860992;EFF=UTR_5_PRIME(MODIFIER||323||242|LOC_Os11g07030|protein_coding|CODING|LOC_Os11g07030.1|1|1) FN589-S.SNP.11:3502021 chr11:003502021 0 W/3502021-3502021 FN589-S Single Base Substitution C-T INTERGENIC HOMO SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3446-S.SNP.11:3516423 chr11:003516423 0 W/3516423-3516423 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.172068;DP=2415;DP4=1358,962,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00393432;MQSB=0.375336;RPB=0.700769;SGB=13.188;VDB=0.947652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3805-S.SNP.11:3529050 chr11:003529050 0 W/3529050-3529050 FN3805-S SNP C -> T AC=1;AN=190;BQB=0.612398;DP=2760;DP4=1242,1447,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.025;MQB=0.333189;MQSB=0.167858;RPB=1;SGB=35.4339;VDB=0.482258;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V485I|898|LOC_Os11g07080|protein_coding|CODING|LOC_Os11g07080.1|2|1) FN2195-S.SNP.11:3539300 chr11:003539300 0 W/3539300-3539300 FN2195-S SNP C -> T AC=2;AN=190;BQB=0.972622;DP=5076;DP4=2403,2361,23,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.81878e-25;MQSB=0.929555;RPB=0.779358;SGB=139.163;VDB=0.226407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L858F|1014|LOC_Os11g07100|protein_coding|CODING|LOC_Os11g07100.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L938F|1094|LOC_Os11g07100|protein_coding|CODING|LOC_Os11g07100.1|3|1) FN1737-S.SNP.11:3546874 chr11:003546874 0 W/3546874-3546874 FN1737-S SNP T -> A AC=2;AN=188;BQB=0.786786;DP=4247;DP4=1841,2353,20,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.97678e-22;MQSB=0.943847;RPB=0.914003;SGB=-46.9554;VDB=0.255838;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.11:3546876 chr11:003546876 0 W/3546876-3546876 FN1737-S SNP T -> A AC=2;AN=188;BQB=0.814112;DP=4253;DP4=1859,2347,21,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.65159e-23;MQSB=0.878385;RPB=0.962774;SGB=41.034;VDB=0.328246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.11:3546879 chr11:003546879 0 W/3546879-3546879 FN1737-S SNP T -> A AC=2;AN=188;BQB=0.818828;DP=4246;DP4=1873,2327,20,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.19324e-23;MQSB=0.898889;RPB=0.323757;SGB=121.023;VDB=0.349929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1445-S.SNP.11:3547776 chr11:003547776 0 W/3547776-3547776 FN1445-S Single Base Substitution T-C INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN762-S.SNP.11:3549856 chr11:003549856 0 W/3549856-3549856 FN762-S Single Base Substitution T-C INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN3444-S.SNP.11:3551691 chr11:003551691 0 W/3551691-3551691 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.761959;DP=2740;DP4=1318,1300,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.65982e-06;MQSB=0.976842;RPB=0.474765;SGB=28.7043;VDB=0.818302;EFF=INTRON(MODIFIER||||369|LOC_Os11g07124|protein_coding|CODING|LOC_Os11g07124.1|5|1) FN3854-S.SNP.11:3554869 chr11:003554869 0 W/3554869-3554869 FN3854-S SNP G -> A AC=1;AN=158;BQB=0.972134;DP=2346;DP4=1063,1205,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.43059e-06;MQSB=0.9816;RPB=0.886666;SGB=33.9591;VDB=0.397591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.11:3558508 chr11:003558508 0 W/3558508-3558508 FN3807-S SNP G -> A AC=2;AN=190;BQB=0.984453;DP=3039;DP4=1593,1336,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.48954e-11;MQSB=0.739655;RPB=0.814556;SGB=90.0802;VDB=0.830573;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.11:3558776 chr11:003558776 0 W/3558776-3558776 FN698-S Single Base Substitution C-T INTERGENIC HOMO SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN916-S.SNP.11:3560011 chr11:003560011 0 W/3560011-3560011 FN916-S Single Base Substitution A-G INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3728-S.SNP.11:3563034 chr11:003563034 0 W/3563034-3563034 FN3728-S SNP A -> G AC=2;AN=190;BQB=0.962011;DP=2919;DP4=1392,1378,17,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.6479e-20;MQSB=0.999906;RPB=0.826642;SGB=124.947;VDB=0.905549;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.11:3563302 chr11:003563302 0 W/3563302-3563302 FN3570-S SNP G -> A AC=1;AN=190;BQB=0.914912;DP=2648;DP4=1285,1255,2,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.54889e-08;MQSB=0.762741;RPB=0.585717;SGB=53.6492;VDB=0.922945;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.11:3564956 chr11:003564956 0 W/3564956-3564956 FN3499-S SNP T -> C AC=1;AN=188;BQB=0.976211;DP=3230;DP4=1372,1750,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.06648e-07;MQSB=0.990566;RPB=0.93652;SGB=25.3545;VDB=0.769036;EFF=INTRON(MODIFIER||||350|LOC_Os11g07150|protein_coding|CODING|LOC_Os11g07150.1|1|1) FN775-S.SNP.11:3578685 chr11:003578685 0 W/3578685-3578685 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3698-S.SNP.11:3579139 chr11:003579139 0 W/3579139-3579139 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.892965;DP=2338;DP4=1367,871,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000427716;MQB=4.82958e-07;MQSB=0.610808;RPB=0.579792;SGB=32.5467;VDB=0.928309;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.11:3584676 chr11:003584676 0 W/3584676-3584676 FN1234-S Single Base Substitution G-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN584-S.SNP.11:3593704 chr11:003593704 0 W/3593704-3593704 FN584-S Single Base Substitution G-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN1506-S.SNP.11:3601472 chr11:003601472 0 W/3601472-3601472 FN1506-S Single Base Substitution C-T INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN968-S.SNP.11:3609412 chr11:003609412 0 W/3609412-3609412 FN968-S Single Base Substitution C-T INTRON HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN2791-S.SNP.11:3613750 chr11:003613750 0 W/3613750-3613750 FN2791-S SNP G -> A AC=1;AN=198;BQB=0.884111;DP=3509;DP4=1743,1536,13,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=5.83447e-05;MQSB=0.490516;RPB=0.994356;SGB=43.7442;VDB=0.794356;EFF=INTRON(MODIFIER||||1024|LOC_Os11g07200|protein_coding|CODING|LOC_Os11g07200.1|1|1),INTRON(MODIFIER||||1024|LOC_Os11g07200|protein_coding|CODING|LOC_Os11g07200.2|1|1) FN894-S.SNP.11:3616263 chr11:003616263 0 W/3616263-3616263 FN894-S Single Base Substitution A-T INTRON HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2661-S.SNP.11:3618149 chr11:003618149 0 W/3618149-3618149 FN2661-S SNP T -> A AC=2;AN=200;BQB=0.878564;DP=5177;DP4=2413,2455,25,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.83502e-27;MQSB=0.992098;RPB=0.579286;SGB=152.03;VDB=0.45486;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R327|1024|LOC_Os11g07200|protein_coding|CODING|LOC_Os11g07200.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R327|1024|LOC_Os11g07200|protein_coding|CODING|LOC_Os11g07200.1|3|1) FN3650-S.SNP.11:3621919 chr11:003621919 0 W/3621919-3621919 FN3650-S SNP T -> A AC=1;AN=190;BQB=0.978589;DP=2961;DP4=1474,1329,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81766e-13;MQSB=0.596723;RPB=0.542252;SGB=64.5316;VDB=0.631022;EFF=INTRON(MODIFIER||||226|LOC_Os11g07220|protein_coding|CODING|LOC_Os11g07220.1|2|1) FN_543-2-6.SNP.11:3626234 chr11:003626234 0 W/3626234-3626234 FN_543-2-6 Single Base Substitution T-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN_543-2-6.SNP.11:3626335 chr11:003626335 0 W/3626335-3626335 FN_543-2-6 Single Base Substitution A-G HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1389-S.SNP.11:3630424 chr11:003630424 0 W/3630424-3630424 FN1389-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g07225 expressed protein SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3607-S.SNP.11:3634168 chr11:003634168 0 W/3634168-3634168 FN3607-S SNP G -> T AC=1;AN=190;BQB=0.938809;DP=2473;DP4=1172,1198,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.69543e-10;MQSB=0.958245;RPB=0.919459;SGB=67.3108;VDB=0.112371;EFF=UTR_5_PRIME(MODIFIER||1187||1012|LOC_Os11g07230|protein_coding|CODING|LOC_Os11g07230.1|2|1) FN906-S.SNP.11:3641216 chr11:003641216 0 W/3641216-3641216 FN906-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g07240 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN2200-S.SNP.11:3648262 chr11:003648262 0 W/3648262-3648262 FN2200-S SNP G -> T AC=2;AN=190;BQB=0.150979;DP=4763;DP4=2336,1846,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.90526e-23;MQSB=0.289083;RPB=0.922054;SGB=47.6197;VDB=0.839088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.11:3648263 chr11:003648263 0 W/3648263-3648263 FN2200-S SNP A -> T AC=2;AN=190;BQB=0.0587959;DP=4764;DP4=2376,1717,21,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.07076e-24;MQSB=0.446326;RPB=0.861671;SGB=44.5119;VDB=0.759064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.11:3654451 chr11:003654451 0 W/3654451-3654451 FN2708-S SNP A -> G AC=2;AN=200;BQB=0.882563;DP=4724;DP4=2172,2109,20,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.75658e-20;MQSB=0.588542;RPB=0.714349;SGB=134.004;VDB=0.734158;EFF=INTERGENIC(MODIFIER||||||||||1) FN3991-S.SNP.11:3655287 chr11:003655287 0 W/3655287-3655287 FN3991-S SNP C -> G AC=1;AN=168;BQB=0.874452;DP=1787;DP4=280,1423,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00167879;MQB=0.0111473;MQSB=0.00815391;RPB=0.991029;SGB=31.3172;VDB=0.814345;EFF=INTERGENIC(MODIFIER||||||||||1) FN-381.SNP.11:3658294 chr11:003658294 0 W/3658294-3658294 FN-381 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g07260 expressed protein SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN3597-S.SNP.11:3662813 chr11:003662813 0 W/3662813-3662813 FN3597-S SNP C -> T AC=1;AN=188;BQB=0.97968;DP=2480;DP4=1363,1029,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.40212e-08;MQSB=0.931178;RPB=0.785314;SGB=48.979;VDB=0.78708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.11:3669565 chr11:003669565 0 W/3669565-3669565 FN1338-S Single Base Substitution C-T INTRON HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2575-S.SNP.11:3680537 chr11:003680537 0 W/3680537-3680537 FN2575-S SNP A -> G AC=1;AN=198;BQB=0.354962;DP=4940;DP4=2111,2585,12,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.85641e-18;MQSB=0.236567;RPB=0.989682;SGB=115.647;VDB=0.527051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.11:3680662 chr11:003680662 0 W/3680662-3680662 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.94984;DP=4284;DP4=2011,1943,10,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.71372e-14;MQSB=0.893002;RPB=0.803883;SGB=44.9151;VDB=0.628808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3378-S.SNP.11:3683761 chr11:003683761 0 W/3683761-3683761 FN3378-S SNP C -> T AC=1;AN=184;BQB=0.96405;DP=2924;DP4=1614,1142,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.02993e-11;MQSB=0.762558;RPB=0.59839;SGB=63.9222;VDB=0.9055;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.11:3685285 chr11:003685285 0 W/3685285-3685285 FN451-S Single Base Substitution C-T INTERGENIC HET SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3460-S.SNP.11:3688821 chr11:003688821 0 W/3688821-3688821 FN3460-S SNP G -> A AC=1;AN=184;BQB=0.94903;DP=2612;DP4=1144,1357,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.77148e-05;MQSB=0.000375598;RPB=0.779968;SGB=21.6609;VDB=0.852145;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.11:3692363 chr11:003692363 0 W/3692363-3692363 FN2674-S SNP T -> C AC=1;AN=200;BQB=0.742418;DP=4904;DP4=2449,2211,18,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10267e-17;MQSB=0.721448;RPB=0.403544;SGB=-7.05853;VDB=0.215474;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.11:3694145 chr11:003694145 0 W/3694145-3694145 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.986405;DP=2816;DP4=1266,1376,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0372869;MQB=0.404851;MQSB=3.6293e-25;RPB=0.0425337;SGB=58.2031;VDB=0.0571999;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.11:3696038 chr11:003696038 0 W/3696038-3696038 FN4304-S SNP T -> A AC=1;AN=170;BQB=0.833302;DP=2257;DP4=1145,958,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00886132;MQB=0.000512236;MQSB=0.0830635;RPB=0.986321;SGB=34.5445;VDB=0.784237;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.11:3696819 chr11:003696819 0 W/3696819-3696819 FN598-S Single Base Substitution C-T INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN-217.SNP.11:3706357 chr11:003706357 0 W/3706357-3706357 FN-217 Single Base Substitution C-T INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN512-S.SNP.11:3727284 chr11:003727284 0 W/3727284-3727284 FN512-S Single Base Substitution T-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2123-S.SNP.11:3730075 chr11:003730075 0 W/3730075-3730075 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.0563808;DP=2741;DP4=1171,1510,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0200657;MQB=0.851862;MQSB=1.00802e-24;RPB=0.998241;SGB=-98.0622;VDB=0.170967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1435-S.SNP.11:3730657 chr11:003730657 0 W/3730657-3730657 FN1435-S Single Base Substitution C-T INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1309-S.SNP.11:3733354 chr11:003733354 0 W/3733354-3733354 FN1309-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. W481-5-1.SNP.11:3741390 chr11:003741390 0 W/3741390-3741390 W481-5-1 Single Base Substitution A-G INTRON HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN4113-S.SNP.11:3742508 chr11:003742508 0 W/3742508-3742508 FN4113-S SNP G -> T AC=2;AN=182;BQB=0.222986;DP=3107;DP4=1570,1367,22,31;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.11025e-21;MQSB=0.973382;RPB=0.439103;SGB=197.078;VDB=0.998938;EFF=INTRON(MODIFIER||||548|LOC_Os11g07440|protein_coding|CODING|LOC_Os11g07440.1|2|1),INTRON(MODIFIER||||451|LOC_Os11g07440|protein_coding|CODING|LOC_Os11g07440.2|2|1),INTRON(MODIFIER||||548|LOC_Os11g07440|protein_coding|CODING|LOC_Os11g07440.3|2|1),INTRON(MODIFIER||||451|LOC_Os11g07440|protein_coding|CODING|LOC_Os11g07440.4|2|1) FN1214-S.SNP.11:3755390 chr11:003755390 0 W/3755390-3755390 FN1214-S Single Base Substitution G-T INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN3411-S.SNP.11:3769390 chr11:003769390 0 W/3769390-3769390 FN3411-S SNP G -> T AC=2;AN=184;BQB=0.925638;DP=2856;DP4=1474,1299,6,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4061e-06;MQSB=0.643043;RPB=0.824872;SGB=35.7479;VDB=0.6928;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.11:3773907 chr11:003773907 0 W/3773907-3773907 FN1012-S Single Base Substitution G-T INTERGENIC HOMO SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3851-S.SNP.11:3779519 chr11:003779519 0 W/3779519-3779519 FN3851-S SNP T -> G AC=2;AN=158;BQB=0.751647;DP=2351;DP4=1037,1191,24,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.20595e-20;MQSB=0.399343;RPB=0.929572;SGB=143.195;VDB=0.263075;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.11:3780517 chr11:003780517 0 W/3780517-3780517 FN351-S Single Base Substitution G-T INTERGENIC HET SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN1403-S.SNP.11:3799714 chr11:003799714 0 W/3799714-3799714 FN1403-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g07490 RNA recognition motif containing protein, putative, expressed SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2630-S.SNP.11:3802699 chr11:003802699 0 W/3802699-3802699 FN2630-S SNP A -> G AC=1;AN=200;BQB=0.999639;DP=4621;DP4=2340,2109,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.9642e-17;MQSB=0.877609;RPB=0.750764;SGB=94.3471;VDB=0.0774056;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y970|970|LOC_Os11g07500|protein_coding|CODING|LOC_Os11g07500.2|14|1),INTRON(MODIFIER||||1003|LOC_Os11g07500|protein_coding|CODING|LOC_Os11g07500.1|14|1) FN2325.SNP.11:3818115 chr11:003818115 0 W/3818115-3818115 FN2325 SNP C -> T AC=1;AN=192;BQB=0.347666;DP=4484;DP4=2089,1988,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=3.30188e-06;MQSB=0.00832111;RPB=0.719979;SGB=5.79046;VDB=0.268925;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A99|342|LOC_Os11g07530|protein_coding|CODING|LOC_Os11g07530.1|1|1) FN2485.SNP.11:3819558 chr11:003819558 0 W/3819558-3819558 FN2485 SNP T -> A AC=2;AN=200;BQB=0.85462;DP=4890;DP4=2500,2094,25,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.82408e-19;MQSB=0.371557;RPB=0.98684;SGB=35.1726;VDB=0.0362009;EFF=INTRON(MODIFIER||||342|LOC_Os11g07530|protein_coding|CODING|LOC_Os11g07530.1|1|1) FN3292-S.SNP.11:3821939 chr11:003821939 0 W/3821939-3821939 FN3292-S SNP G -> A AC=1;AN=184;BQB=0.903662;DP=3178;DP4=1643,1426,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.6283e-11;MQSB=0.989646;RPB=0.997766;SGB=49.835;VDB=0.0326785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V39M|345|LOC_Os11g07540|protein_coding|CODING|LOC_Os11g07540.1|1|1) FN1293-S.SNP.11:3822824 chr11:003822824 0 W/3822824-3822824 FN1293-S Single Base Substitution G-A INTRON HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN898-S.SNP.11:3823784 chr11:003823784 0 W/3823784-3823784 FN898-S Single Base Substitution T-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN4325-S.SNP.11:3824162 chr11:003824162 0 W/3824162-3824162 FN4325-S SNP T -> C AC=2;AN=170;BQB=0.892013;DP=2166;DP4=832,1230,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.54231e-09;MQSB=0.859002;RPB=0.455197;SGB=87.856;VDB=0.368804;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.11:3832730 chr11:003832730 0 W/3832730-3832730 FN4305-S SNP A -> T AC=1;AN=170;BQB=0.964756;DP=1742;DP4=871,807,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.5357e-05;MQSB=0.999955;RPB=0.795405;SGB=30.1021;VDB=0.255821;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.11:3837905 chr11:003837905 0 W/3837905-3837905 FN-286 Single Base Substitution G-A INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN773-S.SNP.11:3851217 chr11:003851217 0 W/3851217-3851217 FN773-S Single Base Substitution A-G INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN2637-S.SNP.11:3851324 chr11:003851324 0 W/3851324-3851324 FN2637-S SNP T -> C AC=1;AN=200;BQB=0.944018;DP=4200;DP4=1967,1983,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.82889e-08;MQSB=0.99465;RPB=0.956247;SGB=49.6594;VDB=0.954391;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.11:3858384 chr11:003858384 0 W/3858384-3858384 FN4176-S SNP T -> C AC=2;AN=170;BQB=0.228441;DP=2250;DP4=1208,977,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.81139e-08;MQSB=0.997258;RPB=0.762168;SGB=87.856;VDB=0.945355;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.11:3859277 chr11:003859277 0 W/3859277-3859277 FN3467-S SNP C -> A AC=1;AN=184;BQB=0.99141;DP=2633;DP4=1356,1219,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.15667e-10;MQSB=0.92665;RPB=0.985482;SGB=71.3514;VDB=0.287478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.11:3860665 chr11:003860665 0 W/3860665-3860665 FN2702-S SNP A -> T AC=1;AN=200;BQB=0.660761;DP=4519;DP4=2126,2235,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.21139e-11;MQSB=0.861165;RPB=0.974997;SGB=72.6852;VDB=0.0128728;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.11:3862674 chr11:003862674 0 W/3862674-3862674 FN3628-S SNP G -> A AC=1;AN=190;BQB=0.385565;DP=3299;DP4=1678,1490,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000352166;MQSB=0.848114;RPB=0.898291;SGB=44.5415;VDB=0.929782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.11:3865576 chr11:003865576 0 W/3865576-3865576 FN3810-S SNP T -> A AC=1;AN=190;BQB=0.90521;DP=2750;DP4=1312,1330,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.67259e-08;MQSB=0.873032;RPB=0.626789;SGB=32.5467;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.11:3880161 chr11:003880161 0 W/3880161-3880161 FN_N1-169-1 Single Base Substitution C-A HET SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN3956-S.SNP.11:3881575 chr11:003881575 0 W/3881575-3881575 FN3956-S SNP A -> T AC=1;AN=168;BQB=0.182218;DP=2340;DP4=1145,1101,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.87756e-05;MQSB=0.978494;RPB=0.847452;SGB=14.8923;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.11:3885019 chr11:003885019 0 W/3885019-3885019 FN-303 Single Base Substitution C-T INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3468-S.SNP.11:3885173 chr11:003885173 0 W/3885173-3885173 FN3468-S SNP G -> A AC=1;AN=184;BQB=0.897772;DP=2376;DP4=1103,1191,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10259e-08;MQSB=0.971657;RPB=0.94707;SGB=71.3514;VDB=0.687416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.11:3895497 chr11:003895497 0 W/3895497-3895497 FN2487 SNP C -> A AC=1;AN=200;BQB=0.277217;DP=3482;DP4=1928,1379,15,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0031591;MQB=2.34507e-08;MQSB=2.12508e-06;RPB=0.476833;SGB=50.3263;VDB=0.180439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2251-S.SNP.11:3899003 chr11:003899003 0 W/3899003-3899003 FN2251-S SNP C -> T AC=2;AN=190;BQB=0.670577;DP=4763;DP4=2257,2133,12,13;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0812513;MQB=0.280265;MQSB=0;RPB=0.59705;SGB=19.6499;VDB=0.707856;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.11:3901315 chr11:003901315 0 W/3901315-3901315 FN1739-S SNP T -> C AC=1;AN=188;BQB=0.77847;DP=3745;DP4=1825,1886,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0160214;MQB=0.085949;MQSB=9.25815e-06;RPB=0.294773;SGB=19.4279;VDB=0.141556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.11:3904842 chr11:003904842 0 W/3904842-3904842 FN2283 SNP A -> G AC=1;AN=192;BQB=0.364843;DP=5204;DP4=2311,2598,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.71363e-15;MQSB=0.704736;RPB=0.547109;SGB=62.2505;VDB=0.36113;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.11:3905498 chr11:003905498 0 W/3905498-3905498 FN3386-S SNP A -> C AC=1;AN=184;BQB=0.999934;DP=2608;DP4=1308,1185,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.979e-08;MQSB=0.951137;RPB=0.987275;SGB=42.7914;VDB=0.937995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.11:3907008 chr11:003907008 0 W/3907008-3907008 FN3464-S SNP C -> T AC=1;AN=184;BQB=0.905862;DP=3253;DP4=1781,1350,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.45714e-12;MQSB=0.76171;RPB=0.687185;SGB=80.3949;VDB=0.645587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.11:3908550 chr11:003908550 0 W/3908550-3908550 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.974221;DP=4840;DP4=2357,2223,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.07651e-06;MQSB=0.831291;RPB=0.990096;SGB=29.4541;VDB=0.39524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G851R|1094|LOC_Os11g07650|protein_coding|CODING|LOC_Os11g07650.1|7|1) FN2597-S.SNP.11:3910492 chr11:003910492 0 W/3910492-3910492 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.566577;DP=4036;DP4=2068,1775,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.08606e-13;MQSB=0.951211;RPB=0.438041;SGB=86.3098;VDB=0.867325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G364D|1094|LOC_Os11g07650|protein_coding|CODING|LOC_Os11g07650.1|4|1) FN-206.SNP.11:3915344 chr11:003915344 0 W/3915344-3915344 FN-206 Single Base Substitution G-C INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN2435.SNP.11:3916045 chr11:003916045 0 W/3916045-3916045 FN2435 SNP G -> A AC=2;AN=200;BQB=0.915084;DP=4736;DP4=2542,1899,22,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90387e-20;MQSB=0.90933;RPB=0.241653;SGB=130.399;VDB=0.891515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.11:3916394 chr11:003916394 0 W/3916394-3916394 FN2794-S SNP G -> A AC=1;AN=198;BQB=0.935347;DP=4308;DP4=2049,1911,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.32019e-06;MQSB=0.921549;RPB=0.540661;SGB=-15.026;VDB=0.814147;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.11:3919606 chr11:003919606 0 W/3919606-3919606 FN2411 SNP A -> T AC=1;AN=200;BQB=0.800349;DP=4915;DP4=2142,2294,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.66069e-10;MQSB=0.990925;RPB=0.995716;SGB=42.5108;VDB=0.204138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.11:3924410 chr11:003924410 0 W/3924410-3924410 FN3283-S SNP T -> A AC=1;AN=184;BQB=0.965866;DP=2892;DP4=1422,1372,3,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06446e-06;MQSB=0.999962;RPB=0.778286;SGB=39.2697;VDB=0.868407;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.11:3924411 chr11:003924411 0 W/3924411-3924411 FN411-S Single Base Substitution A-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN828-S.SNP.11:3926507 chr11:003926507 0 W/3926507-3926507 FN828-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g07690 dirigent, putative, expressed SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN-390.SNP.11:3933849 chr11:003933849 0 W/3933849-3933849 FN-390 Single Base Substitution G-T INTERGENIC HOMO SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN3050-S.SNP.11:3937123 chr11:003937123 0 W/3937123-3937123 FN3050-S SNP G -> T AC=1;AN=184;BQB=0.960783;DP=2926;DP4=1351,1490,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.55339e-08;MQSB=0.995579;RPB=0.968623;SGB=53.2642;VDB=0.433355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q339H|777|LOC_Os11g07720|protein_coding|CODING|LOC_Os11g07720.1|2|1) FN2275-S.SNP.11:3937732 chr11:003937732 0 W/3937732-3937732 FN2275-S SNP G -> A AC=1;AN=190;BQB=0.299998;DP=4070;DP4=2133,1662,29,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.93279e-18;MQSB=0.999462;RPB=0.935357;SGB=142.717;VDB=0.915659;EFF=INTRON(MODIFIER||||777|LOC_Os11g07720|protein_coding|CODING|LOC_Os11g07720.1|3|1) FN2309.SNP.11:3940393 chr11:003940393 0 W/3940393-3940393 FN2309 SNP G -> A AC=2;AN=192;BQB=0.924221;DP=5087;DP4=2368,2327,25,17;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.0184785;MQB=6.36383e-10;MQSB=0.000888386;RPB=0.889235;SGB=-0.0956204;VDB=0.655283;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.11:3943747 chr11:003943747 0 W/3943747-3943747 FN765-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN2136-S.SNP.11:3945656 chr11:003945656 0 W/3945656-3945656 FN2136-S SNP T -> C AC=2;AN=168;BQB=0.860981;DP=2807;DP4=1411,1338,17,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.33932e-18;MQSB=0.84727;RPB=0.821831;SGB=-139.169;VDB=0.366584;EFF=INTRON(MODIFIER||||1604|LOC_Os11g07730|protein_coding|CODING|LOC_Os11g07730.1|4|1) FN739-S.SNP.11:3947268 chr11:003947268 0 W/3947268-3947268 FN739-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g07730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3569-S.SNP.11:3949472 chr11:003949472 0 W/3949472-3949472 FN3569-S SNP G -> C AC=2;AN=188;BQB=0.933738;DP=2386;DP4=1124,1197,10,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72384e-14;MQSB=0.83366;RPB=0.299343;SGB=98.9552;VDB=0.228028;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.11:3961231 chr11:003961231 0 W/3961231-3961231 FN872-S Single Base Substitution C-T INTRON HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN555-S.SNP.11:3965517 chr11:003965517 0 W/3965517-3965517 FN555-S Single Base Substitution G-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2742-S.SNP.11:3967718 chr11:003967718 0 W/3967718-3967718 FN2742-S SNP C -> T AC=1;AN=200;BQB=0.82677;DP=4039;DP4=1708,2018,9,14;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.018569;MQB=0.000135485;MQSB=0.112151;RPB=0.999826;SGB=100.316;VDB=0.0216463;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.11:3967892 chr11:003967892 0 W/3967892-3967892 FN1020-S Single Base Substitution T-C INTERGENIC HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2204-S.SNP.11:3969100 chr11:003969100 0 W/3969100-3969100 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.158022;DP=4043;DP4=1859,1767,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0284442;MQB=0.0969971;MQSB=5.89701e-07;RPB=0.928654;SGB=41.5369;VDB=0.721807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A243T|1756|LOC_Os11g07790|protein_coding|CODING|LOC_Os11g07790.1|1|1) FN3381-S.SNP.11:3969333 chr11:003969333 0 W/3969333-3969333 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.996238;DP=3302;DP4=1288,1892,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00726832;MQB=1.6749e-10;MQSB=0.0856603;RPB=0.791528;SGB=12.8895;VDB=0.167375;EFF=INTRON(MODIFIER||||1756|LOC_Os11g07790|protein_coding|CODING|LOC_Os11g07790.1|1|1) FN4124-S.SNP.11:3971116 chr11:003971116 0 W/3971116-3971116 FN4124-S SNP G -> C AC=1;AN=182;BQB=0.97141;DP=3196;DP4=1483,1650,7,11;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.00406758;MQB=0.000177064;MQSB=5.71153e-11;RPB=0.778654;SGB=75.6874;VDB=0.644474;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E760Q|1756|LOC_Os11g07790|protein_coding|CODING|LOC_Os11g07790.1|4|1) 701-2.SNP.11:3974283 chr11:003974283 0 W/3974283-3974283 701-2 Single Base Substitution G-A INTERGENIC Homo SNo: 1436, Mutant_ID: 701-2, Generation: M2, Mutations: 21, Genes: 34, Seed availability: Yes. FN354-S.SNP.11:3975465 chr11:003975465 0 W/3975465-3975465 FN354-S Single Base Substitution G-T INTERGENIC HOMO SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN-104.SNP.11:3984410 chr11:003984410 0 W/3984410-3984410 FN-104 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g07800 retrotransposon protein, putative, unclassified, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN-104.SNP.11:3984411 chr11:003984411 0 W/3984411-3984411 FN-104 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g07800 retrotransposon protein, putative, unclassified, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1134-S.SNP.11:3987835 chr11:003987835 0 W/3987835-3987835 FN1134-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN794-S.SNP.11:3993867 chr11:003993867 0 W/3993867-3993867 FN794-S Single Base Substitution C-T INTERGENIC HET SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1492-S.SNP.11:3997403 chr11:003997403 0 W/3997403-3997403 FN1492-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g07840 expressed protein SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2556-S.SNP.11:3997915 chr11:003997915 0 W/3997915-3997915 FN2556-S SNP T -> A AC=1;AN=198;BQB=0.765181;DP=4545;DP4=2317,2044,28,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.24961e-24;MQSB=0.714966;RPB=0.89234;SGB=137.217;VDB=0.0749082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K214M|461|LOC_Os11g07840|protein_coding|CODING|LOC_Os11g07840.1|7|1) FN-188.SNP.11:3999945 chr11:003999945 0 W/3999945-3999945 FN-188 Single Base Substitution A-T INTERGENIC HOMO SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. 822-5-5.SNP.11:4002619 chr11:004002619 0 W/4002619-4002619 822-5-5 Single Base Substitution A-G INTERGENIC Homo SNo: 1493, Mutant_ID: 822-5-5, Generation: M2, Mutations: 21, Genes: 100, Seed availability: Yes. FN_822-5-1.SNP.11:4002619 chr11:004002619 0 W/4002619-4002619 FN_822-5-1 Single Base Substitution A-G HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2267-S.SNP.11:4004836 chr11:004004836 0 W/4004836-4004836 FN2267-S SNP A -> T AC=2;AN=190;BQB=0.888209;DP=4693;DP4=2222,2081,30,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.95164e-22;MQSB=0.179922;RPB=0.705913;SGB=146.271;VDB=0.883893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D378E|387|LOC_Os11g07850|protein_coding|CODING|LOC_Os11g07850.1|11|1) FN-368.SNP.11:4006617 chr11:004006617 0 W/4006617-4006617 FN-368 Single Base Substitution T-G INTRON HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN461-S.SNP.11:4006952 chr11:004006952 0 W/4006952-4006952 FN461-S Single Base Substitution G-A INTRON HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN266-S.SNP.11:4013216 chr11:004013216 0 W/4013216-4013216 FN266-S Single Base Substitution A-G INTERGENIC HET SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1297-S.SNP.11:4013338 chr11:004013338 0 W/4013338-4013338 FN1297-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1388-S.SNP.11:4028861 chr11:004028861 0 W/4028861-4028861 FN1388-S Single Base Substitution T-C INTRON HET SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2428.SNP.11:4038840 chr11:004038840 0 W/4038840-4038840 FN2428 SNP T -> A AC=1;AN=200;BQB=0.965196;DP=4626;DP4=2217,1962,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216169;MQB=5.11785e-11;MQSB=0.915727;RPB=0.480805;SGB=58.2954;VDB=0.292223;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.11:4039165 chr11:004039165 0 W/4039165-4039165 FN3900-S SNP T -> A AC=1;AN=158;BQB=0.69681;DP=2561;DP4=1108,1283,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.17663e-06;MQSB=0.961932;RPB=0.987461;SGB=-0.652741;VDB=0.0758393;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.11:4043066 chr11:004043066 0 W/4043066-4043066 FN4039-S SNP C -> T AC=2;AN=168;BQB=0.908802;DP=2564;DP4=1144,1291,14,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.73033e-16;MQSB=0.994847;RPB=0.173454;SGB=114.204;VDB=0.0811248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.11:4049721 chr11:004049721 0 W/4049721-4049721 FN3835-S SNP C -> T AC=1;AN=190;BQB=0.910372;DP=2548;DP4=1097,1380,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.96082e-06;MQSB=0.999911;RPB=0.526557;SGB=35.4339;VDB=0.0408554;EFF=INTRON(MODIFIER||||2147|LOC_Os11g07890|protein_coding|CODING|LOC_Os11g07890.1|1|1) FN3979-S.SNP.11:4069824 chr11:004069824 0 W/4069824-4069824 FN3979-S SNP A -> T AC=1;AN=168;BQB=0.351741;DP=2424;DP4=1041,1247,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44764e-07;MQSB=0.950055;RPB=0.491278;SGB=78.7577;VDB=0.516975;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.11:4088744 chr11:004088744 0 W/4088744-4088744 FN591-S Single Base Substitution C-A INTRON HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2129-S.SNP.11:4095205 chr11:004095205 0 W/4095205-4095205 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.212048;DP=3359;DP4=2097,1217,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.25856e-07;MQSB=0.982494;RPB=0.632606;SGB=-71.2065;VDB=0.433903;EFF=UTR_3_PRIME(MODIFIER||90||128|LOC_Os11g07922|protein_coding|CODING|LOC_Os11g07922.2|2|1),INTRON(MODIFIER||||332|LOC_Os11g07922|protein_coding|CODING|LOC_Os11g07922.1|2|1) FN-126.SNP.11:4106216 chr11:004106216 0 W/4106216-4106216 FN-126 Single Base Substitution C-G INTRON HET SNo: 126, Mutant_ID: FN-126, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN1222-S.SNP.11:4108543 chr11:004108543 0 W/4108543-4108543 FN1222-S Single Base Substitution C-T INTRON HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1546-S.SNP.11:4108833 chr11:004108833 0 W/4108833-4108833 FN1546-S Single Base Substitution T-A SPLICE_SITE_REGION Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1546-S.SNP.11:4108834 chr11:004108834 0 W/4108834-4108834 FN1546-S Single Base Substitution T-A SPLICE_SITE_REGION Homo SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1762-S.SNP.11:4114749 chr11:004114749 0 W/4114749-4114749 FN1762-S SNP G -> C AC=2;AN=188;BQB=0.493716;DP=2509;DP4=1799,684,14,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.93366e-07;MQSB=0.99386;RPB=0.731516;SGB=10.1681;VDB=0.804248;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.11:4118323 chr11:004118323 0 W/4118323-4118323 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN4078-S.SNP.11:4122867 chr11:004122867 0 W/4122867-4122867 FN4078-S SNP C -> T AC=1;AN=182;BQB=0.999783;DP=2592;DP4=1103,1374,7,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.59897e-06;MQSB=0.787358;RPB=0.749817;SGB=44.1115;VDB=0.509155;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G221D|262|LOC_Os11g07950|protein_coding|CODING|LOC_Os11g07950.1|1|1) FN2302.SNP.11:4130671 chr11:004130671 0 W/4130671-4130671 FN2302 SNP C -> T AC=2;AN=192;BQB=0.99526;DP=4798;DP4=2267,2170,31,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.87756e-28;MQSB=0.734921;RPB=0.69209;SGB=-120.491;VDB=0.618777;EFF=INTERGENIC(MODIFIER||||||||||1) FN1650-S.SNP.11:4131781 chr11:004131781 0 W/4131781-4131781 FN1650-S Single Base Substitution C-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN1119-S.SNP.11:4131862 chr11:004131862 0 W/4131862-4131862 FN1119-S Single Base Substitution C-T INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2662-S.SNP.11:4144019 chr11:004144019 0 W/4144019-4144019 FN2662-S SNP A -> G AC=2;AN=200;BQB=0.999453;DP=4865;DP4=2260,2216,34,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.88676e-33;MQSB=0.978944;RPB=0.949688;SGB=146.718;VDB=0.891491;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.11:4150774 chr11:004150774 0 W/4150774-4150774 FN2581-S SNP G -> T AC=1;AN=198;BQB=0.520967;DP=4227;DP4=2002,2008,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.25345e-08;MQSB=0.561716;RPB=0.824689;SGB=47.3393;VDB=0.767787;EFF=INTRON(MODIFIER||||191|LOC_Os11g07980|protein_coding|CODING|LOC_Os11g07980.1|1|1) FN-301.SNP.11:4151811 chr11:004151811 0 W/4151811-4151811 FN-301 Single Base Substitution C-T INTRON HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN893-S.SNP.11:4154426 chr11:004154426 0 W/4154426-4154426 FN893-S Single Base Substitution A-T INTRON HOMO SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN997-S.SNP.11:4159682 chr11:004159682 0 W/4159682-4159682 FN997-S Single Base Substitution C-A INTRON HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN4001-S.SNP.11:4177102 chr11:004177102 0 W/4177102-4177102 FN4001-S SNP T -> C AC=2;AN=168;BQB=0.885232;DP=2560;DP4=1313,1113,14,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.77914e-16;MQSB=0.815656;RPB=0.992688;SGB=96.5026;VDB=0.99701;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.11:4179880 chr11:004179880 0 W/4179880-4179880 FN3396-S SNP T -> A AC=1;AN=184;BQB=0.816744;DP=2978;DP4=1584,1230,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.15202e-11;MQSB=0.235722;RPB=0.298569;SGB=80.3949;VDB=0.43778;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.11:4190645 chr11:004190645 0 W/4190645-4190645 FN1744-S SNP G -> A AC=2;AN=188;BQB=0.871364;DP=2099;DP4=866,1103,10,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.26971e-14;MQSB=0.952534;RPB=0.804725;SGB=25.601;VDB=0.159293;EFF=INTRON(MODIFIER||||709|LOC_Os11g08050|protein_coding|CODING|LOC_Os11g08050.1|2|1) FN3039-S.SNP.11:4190645 chr11:004190645 0 W/4190645-4190645 FN3039-S SNP G -> A AC=2;AN=184;BQB=0.444766;DP=2597;DP4=1149,1295,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.04778e-13;MQSB=0.977066;RPB=0.78504;SGB=125.613;VDB=0.966625;EFF=INTRON(MODIFIER||||709|LOC_Os11g08050|protein_coding|CODING|LOC_Os11g08050.1|2|1) FN4235-S.SNP.11:4190645 chr11:004190645 0 W/4190645-4190645 FN4235-S SNP G -> A AC=1;AN=170;BQB=0.940797;DP=2230;DP4=1022,1089,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.13314e-06;MQSB=0.930301;RPB=0.996382;SGB=38.987;VDB=0.193383;EFF=INTRON(MODIFIER||||709|LOC_Os11g08050|protein_coding|CODING|LOC_Os11g08050.1|2|1) FN-64.SNP.11:4191774 chr11:004191774 0 W/4191774-4191774 FN-64 Single Base Substitution G-A INTRON HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN3412-S.SNP.11:4213280 chr11:004213280 0 W/4213280-4213280 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.926648;DP=2785;DP4=1288,1415,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.64011e-07;MQSB=0.974736;RPB=0.389959;SGB=53.2642;VDB=0.309271;EFF=INTRON(MODIFIER||||404|LOC_Os11g08070|protein_coding|CODING|LOC_Os11g08070.1|1|1) FN3545-S.SNP.11:4215918 chr11:004215918 0 W/4215918-4215918 FN3545-S SNP G -> A AC=2;AN=188;BQB=0.985282;DP=2789;DP4=1317,1397,12,12;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0200789;MQB=0.858798;MQSB=0.928515;RPB=0.561828;SGB=103.498;VDB=0.0174289;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.11:4231272 chr11:004231272 0 W/4231272-4231272 FN_786-4-1 Single Base Substitution G-C HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN-397.SNP.11:4237015 chr11:004237015 0 W/4237015-4237015 FN-397 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g08090 expressed protein SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN829-S.SNP.11:4244738 chr11:004244738 0 W/4244738-4244738 FN829-S Single Base Substitution C-T INTERGENIC HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN2217-S.SNP.11:4272426 chr11:004272426 0 W/4272426-4272426 FN2217-S SNP C -> T AC=2;AN=190;BQB=0.795407;DP=3454;DP4=1676,1317,20,10;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00231616;MQB=8.67966e-07;MQSB=0.75476;RPB=0.786468;SGB=96.5165;VDB=0.422265;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G93|156|LOC_Os11g08140|protein_coding|CODING|LOC_Os11g08140.1|1|1) FN1739-S.SNP.11:4272875 chr11:004272875 0 W/4272875-4272875 FN1739-S SNP C -> T AC=1;AN=188;BQB=0.903497;DP=1436;DP4=1020,371,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000696379;MQB=0.000227497;MQSB=0.999895;RPB=0.964735;SGB=26.2637;VDB=0.342553;EFF=INTRON(MODIFIER||||156|LOC_Os11g08140|protein_coding|CODING|LOC_Os11g08140.1|1|1) FN1288-S.SNP.11:4280180 chr11:004280180 0 W/4280180-4280180 FN1288-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN2637-S.SNP.11:4286116 chr11:004286116 0 W/4286116-4286116 FN2637-S SNP T -> C AC=1;AN=200;BQB=0.976928;DP=5169;DP4=2657,2287,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60044e-13;MQSB=0.903459;RPB=0.225364;SGB=100.316;VDB=0.454614;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.11:4296545 chr11:004296545 0 W/4296545-4296545 FN517-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g08200 eukaryotic aspartyl protease domain containing protein, expressed SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2395.SNP.11:4308052 chr11:004308052 0 W/4308052-4308052 FN2395 SNP G -> T AC=2;AN=200;BQB=0.961056;DP=5023;DP4=2479,2026,25,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000199084;MQB=1.49134e-19;MQSB=0.731329;RPB=0.512679;SGB=-90.3916;VDB=0.710815;EFF=INTERGENIC(MODIFIER||||||||||1) FN4041-S.SNP.11:4308487 chr11:004308487 0 W/4308487-4308487 FN4041-S SNP T -> C AC=2;AN=168;BQB=0.999953;DP=2564;DP4=1240,1186,14,6;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000780031;MQB=6.16741e-07;MQSB=1.00191e-09;RPB=0.480465;SGB=34.3388;VDB=0.782578;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.11:4314135 chr11:004314135 0 W/4314135-4314135 FN914-S Single Base Substitution A-T INTERGENIC HOMO SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1697-S.SNP.11:4316109 chr11:004316109 0 W/4316109-4316109 FN1697-S SNP G -> A AC=1;AN=188;BQB=0.737777;DP=2584;DP4=1242,1307,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.76745e-07;MQSB=0.989741;RPB=0.500429;SGB=32.441;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2648-S.SNP.11:4318184 chr11:004318184 0 W/4318184-4318184 FN2648-S SNP A -> C AC=1;AN=200;BQB=0.984261;DP=4284;DP4=2098,1900,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.87344e-14;MQSB=0.712946;RPB=0.96857;SGB=15.9106;VDB=0.226691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1624-S.SNP.11:4320944 chr11:004320944 0 W/4320944-4320944 FN1624-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g08230 DEFL46 - Defensin and Defensin-like DEFL family, expressed SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1488-S.SNP.11:4321471 chr11:004321471 0 W/4321471-4321471 FN1488-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g08230 DEFL46 - Defensin and Defensin-like DEFL family, expressed SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1022-S.SNP.11:4323098 chr11:004323098 0 W/4323098-4323098 FN1022-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g08230 DEFL46 - Defensin and Defensin-like DEFL family, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2463.SNP.11:4324782 chr11:004324782 0 W/4324782-4324782 FN2463 SNP G -> A AC=1;AN=200;BQB=0.641708;DP=4258;DP4=1965,1981,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.05992e-07;MQSB=0.981222;RPB=0.872251;SGB=16.4591;VDB=0.97092;EFF=SPLICE_SITE_REGION(LOW||||885|LOC_Os11g08230|protein_coding|CODING|LOC_Os11g08230.1|2|1),INTRON(MODIFIER||||885|LOC_Os11g08230|protein_coding|CODING|LOC_Os11g08230.1|2|1) FN715-S.SNP.11:4328832 chr11:004328832 0 W/4328832-4328832 FN715-S Single Base Substitution T-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN715-S.SNP.11:4328836 chr11:004328836 0 W/4328836-4328836 FN715-S Single Base Substitution T-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN715-S.SNP.11:4328837 chr11:004328837 0 W/4328837-4328837 FN715-S Single Base Substitution G-A INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN2121-S.SNP.11:4328980 chr11:004328980 0 W/4328980-4328980 FN2121-S SNP G -> A AC=2;AN=168;BQB=0.997482;DP=3333;DP4=1580,1689,14,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.17824e-17;MQSB=0.965438;RPB=0.995991;SGB=75.6627;VDB=0.674965;EFF=INTERGENIC(MODIFIER||||||||||1) FN-187.SNP.11:4355524 chr11:004355524 0 W/4355524-4355524 FN-187 Single Base Substitution G-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN474-S.SNP.11:4361218 chr11:004361218 0 W/4361218-4361218 FN474-S Single Base Substitution T-G INTERGENIC HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN1680-S.SNP.11:4363704 chr11:004363704 0 W/4363704-4363704 FN1680-S SNP A -> T AC=1;AN=188;BQB=0.00121225;DP=3650;DP4=1898,1701,25,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.20405e-14;MQSB=0.620757;RPB=0.972339;SGB=-190.483;VDB=0.649592;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.11:4364108 chr11:004364108 0 W/4364108-4364108 FN4253-S SNP A -> T AC=1;AN=170;BQB=0.853622;DP=2339;DP4=1096,1161,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.35988e-05;MQSB=0.995673;RPB=0.650754;SGB=10.1134;VDB=0.630515;EFF=INTERGENIC(MODIFIER||||||||||1) FN588-S.SNP.11:4366918 chr11:004366918 0 W/4366918-4366918 FN588-S Single Base Substitution A-G INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN2399.SNP.11:4368596 chr11:004368596 0 W/4368596-4368596 FN2399 SNP C -> T AC=1;AN=200;BQB=0.511033;DP=4490;DP4=2476,1797,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02068e-07;MQSB=0.906648;RPB=0.971888;SGB=24.2746;VDB=0.634553;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.11:4370091 chr11:004370091 0 W/4370091-4370091 FN1668-S SNP A -> G AC=2;AN=188;BQB=0.486597;DP=3147;DP4=1620,1462,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.00729e-21;MQSB=0.996392;RPB=0.846228;SGB=41.034;VDB=0.550313;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.11:4370637 chr11:004370637 0 W/4370637-4370637 FN1094-S Single Base Substitution G-A INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN4160-S.SNP.11:4372827 chr11:004372827 0 W/4372827-4372827 FN4160-S SNP T -> A AC=1;AN=170;BQB=0.964513;DP=1796;DP4=1063,691,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.87196e-06;MQSB=0.991923;RPB=0.193605;SGB=34.5445;VDB=0.690812;EFF=INTERGENIC(MODIFIER||||||||||1) FN3753-S.SNP.11:4374307 chr11:004374307 0 W/4374307-4374307 FN3753-S SNP C -> G AC=1;AN=190;BQB=0.842294;DP=2516;DP4=1246,1110,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.50519e-05;MQSB=0.999011;RPB=0.953193;SGB=25.439;VDB=0.337328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.11:4374351 chr11:004374351 0 W/4374351-4374351 FN2795-S SNP C -> T AC=1;AN=186;BQB=0.823256;DP=3886;DP4=2101,1618,16,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=4.96256e-15;MQSB=0.980722;RPB=1;SGB=72.5051;VDB=0.0658298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.11:4374352 chr11:004374352 0 W/4374352-4374352 FN2795-S SNP T -> C AC=1;AN=186;BQB=0.933522;DP=3891;DP4=2117,1578,15,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.72628e-14;MQSB=0.905538;RPB=0.995118;SGB=95.5;VDB=0.0836507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.11:4388881 chr11:004388881 0 W/4388881-4388881 FN1222-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g08330 POLD1 - Putative DNA polymerase delta catalytic subunit, expressed SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2666-S.SNP.11:4394509 chr11:004394509 0 W/4394509-4394509 FN2666-S SNP T -> C AC=1;AN=200;BQB=0.994521;DP=4630;DP4=2052,2305,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64912e-11;MQSB=0.981142;RPB=0.894291;SGB=11.0951;VDB=0.389017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T346A|1105|LOC_Os11g08330|protein_coding|CODING|LOC_Os11g08330.1|7|1) FN1523-S.SNP.11:4401757 chr11:004401757 0 W/4401757-4401757 FN1523-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g08340 OsGH3.12 - Probable indole-3-acetic acid-amido synthetase, expressed SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN3578-S.SNP.11:4402028 chr11:004402028 0 W/4402028-4402028 FN3578-S SNP C -> T AC=1;AN=188;BQB=0.977306;DP=4130;DP4=2118,1893,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.90904e-11;MQSB=0.999953;RPB=0.920114;SGB=94.4119;VDB=0.617645;EFF=INTRON(MODIFIER||||613|LOC_Os11g08340|protein_coding|CODING|LOC_Os11g08340.1|2|1) FN757-S.SNP.11:4405466 chr11:004405466 0 W/4405466-4405466 FN757-S Single Base Substitution T-C INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN2795-S.SNP.11:4416903 chr11:004416903 0 W/4416903-4416903 FN2795-S SNP A -> G AC=1;AN=198;BQB=0.924695;DP=4011;DP4=1893,1893,15,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=8.22904e-12;MQSB=0.633126;RPB=0.892571;SGB=118.476;VDB=0.107972;EFF=INTRON(MODIFIER||||309|LOC_Os11g08380|protein_coding|CODING|LOC_Os11g08380.1|3|1) FN3944-S.SNP.11:4420877 chr11:004420877 0 W/4420877-4420877 FN3944-S SNP G -> A AC=2;AN=168;BQB=0.997849;DP=2653;DP4=1386,1143,20,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.82144e-17;MQSB=0.929119;RPB=0.999258;SGB=93.0718;VDB=0.151611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.11:4422366 chr11:004422366 0 W/4422366-4422366 FN3666-S SNP C -> T AC=2;AN=190;BQB=0.996425;DP=2724;DP4=1203,1420,11,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00367107;MQB=2.96203e-13;MQSB=0.983192;RPB=0.46256;SGB=108.296;VDB=0.192082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A335T|503|LOC_Os11g08390|protein_coding|CODING|LOC_Os11g08390.1|1|1) FN1142-S.SNP.11:4422481 chr11:004422481 0 W/4422481-4422481 FN1142-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2749-S.SNP.11:4427695 chr11:004427695 0 W/4427695-4427695 FN2749-S SNP T -> G AC=1;AN=200;BQB=0.99426;DP=5161;DP4=2566,2405,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24e-10;MQSB=0.992454;RPB=0.97349;SGB=54.6902;VDB=0.34822;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.11:4440000 chr11:004440000 0 W/4440000-4440000 FN1739-S SNP T -> C AC=1;AN=188;BQB=0.460315;DP=1916;DP4=904,961,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000244957;MQSB=0.560579;RPB=0.884367;SGB=10.8165;VDB=0.38593;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S38G|182|LOC_Os11g08420|protein_coding|CODING|LOC_Os11g08420.1|1|1) FN2652-S.SNP.11:4450055 chr11:004450055 0 W/4450055-4450055 FN2652-S SNP G -> A AC=1;AN=200;BQB=0.965559;DP=4570;DP4=2239,2085,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.81663e-08;MQSB=0.999971;RPB=0.937254;SGB=47.4799;VDB=0.446847;EFF=INTRON(MODIFIER||||658|LOC_Os11g08445|protein_coding|CODING|LOC_Os11g08445.1|1|1) FN2121-S.SNP.11:4458218 chr11:004458218 0 W/4458218-4458218 FN2121-S SNP C -> A AC=2;AN=168;BQB=0.595056;DP=2774;DP4=973,1723,11,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.51813e-21;MQSB=0.919583;RPB=0.289626;SGB=73.2319;VDB=0.28274;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.11:4465843 chr11:004465843 0 W/4465843-4465843 FN3493-S SNP G -> A AC=2;AN=184;BQB=0.997065;DP=2536;DP4=1101,1349,14,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.716e-17;MQSB=0.974684;RPB=0.490598;SGB=112.047;VDB=0.535448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.11:4465844 chr11:004465844 0 W/4465844-4465844 FN3493-S SNP A -> G AC=2;AN=184;BQB=0.923044;DP=2550;DP4=1106,1343,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.31825e-17;MQSB=0.953863;RPB=0.64464;SGB=116.569;VDB=0.53345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.11:4474549 chr11:004474549 0 W/4474549-4474549 FN3729-S SNP C -> A AC=1;AN=190;BQB=0.876317;DP=2514;DP4=1311,1080,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.60493e-12;MQSB=0.916943;RPB=0.399192;SGB=99.1879;VDB=0.889354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.11:4481315 chr11:004481315 0 W/4481315-4481315 FN3560-S SNP A -> G AC=1;AN=188;BQB=0.998552;DP=3240;DP4=1554,1547,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.41879e-13;MQSB=0.934058;RPB=0.987867;SGB=74.9605;VDB=0.238872;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.11:4481847 chr11:004481847 0 W/4481847-4481847 FN1265-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g08480 expressed protein SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN3694-S.SNP.11:4489029 chr11:004489029 0 W/4489029-4489029 FN3694-S SNP C -> T AC=1;AN=190;BQB=0.662632;DP=3003;DP4=1513,1343,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63395e-06;MQSB=0.993868;RPB=0.956817;SGB=21.1058;VDB=0.939074;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.11:4497517 chr11:004497517 0 W/4497517-4497517 FN3837-S SNP C -> T AC=2;AN=190;BQB=0.613752;DP=1114;DP4=142,883,1,9;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.000897666;MQB=0.515452;MQSB=2.27313e-23;RPB=0.198187;SGB=39.9877;VDB=0.539642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.11:4500193 chr11:004500193 0 W/4500193-4500193 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.987045;DP=4783;DP4=2576,1854,20,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40249e-14;MQSB=0.142441;RPB=0.137149;SGB=23.9365;VDB=0.547862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.11:4502531 chr11:004502531 0 W/4502531-4502531 FN2240-S SNP C -> G AC=1;AN=190;BQB=0.803634;DP=4591;DP4=1708,2588,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.30303e-07;MQSB=0.883336;RPB=0.953003;SGB=28.9929;VDB=0.603911;EFF=INTERGENIC(MODIFIER||||||||||1) FN-223.SNP.11:4503285 chr11:004503285 0 W/4503285-4503285 FN-223 Single Base Substitution T-C INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN3773-S.SNP.11:4510252 chr11:004510252 0 W/4510252-4510252 FN3773-S SNP C -> T AC=1;AN=190;BQB=0.898908;DP=3270;DP4=1720,1473,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.69262e-09;MQSB=0.951496;RPB=0.0702963;SGB=58.2031;VDB=0.514905;EFF=INTERGENIC(MODIFIER||||||||||1) FN450-S.SNP.11:4510373 chr11:004510373 0 W/4510373-4510373 FN450-S Single Base Substitution A-C INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN1346-S.SNP.11:4512967 chr11:004512967 0 W/4512967-4512967 FN1346-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g08542 retrotransposon protein, putative, unclassified, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN3324-S.SNP.11:4518931 chr11:004518931 0 W/4518931-4518931 FN3324-S SNP C -> T AC=1;AN=184;BQB=0.99039;DP=2640;DP4=1262,1304,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.18147e-06;MQSB=0.976787;RPB=0.999564;SGB=48.7425;VDB=0.622197;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G163|1301|LOC_Os11g08550|protein_coding|CODING|LOC_Os11g08550.1|2|1) FN-309.SNP.11:4520640 chr11:004520640 0 W/4520640-4520640 FN-309 Single Base Substitution G-A INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2242-S.SNP.11:4521031 chr11:004521031 0 W/4521031-4521031 FN2242-S SNP G -> T AC=1;AN=190;BQB=0.995621;DP=5044;DP4=2369,2227,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22219e-10;MQSB=0.950777;RPB=0.316733;SGB=13.4344;VDB=0.425731;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.11:4524213 chr11:004524213 0 W/4524213-4524213 FN-131 Single Base Substitution A-T INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN1254-S.SNP.11:4524441 chr11:004524441 0 W/4524441-4524441 FN1254-S Single Base Substitution G-A INTRON HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN-82.SNP.11:4525730 chr11:004525730 0 W/4525730-4525730 FN-82 Single Base Substitution A-T INTRON HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2285.SNP.11:4541997 chr11:004541997 0 W/4541997-4541997 FN2285 SNP A -> T AC=1;AN=192;BQB=0.753101;DP=4739;DP4=2093,2326,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.11608e-13;MQSB=0.818382;RPB=0.919882;SGB=-8.56084;VDB=0.965735;EFF=INTRON(MODIFIER||||759|LOC_Os11g08569|protein_coding|CODING|LOC_Os11g08569.1|7|1) FN1249-S.SNP.11:4544194 chr11:004544194 0 W/4544194-4544194 FN1249-S Single Base Substitution T-C INTRON HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN-231.SNP.11:4546172 chr11:004546172 0 W/4546172-4546172 FN-231 Single Base Substitution G-A INTRON HOMO SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN819-S.SNP.11:4549046 chr11:004549046 0 W/4549046-4549046 FN819-S Single Base Substitution T-C INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3785-S.SNP.11:4550202 chr11:004550202 0 W/4550202-4550202 FN3785-S SNP C -> T AC=2;AN=190;BQB=0.582601;DP=2559;DP4=1164,1310,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.54025e-08;MQSB=0.999997;RPB=0.85544;SGB=71.8647;VDB=0.58225;EFF=INTRON(MODIFIER||||759|LOC_Os11g08569|protein_coding|CODING|LOC_Os11g08569.1|10|1) FN1687-S.SNP.11:4554506 chr11:004554506 0 W/4554506-4554506 FN1687-S SNP G -> A AC=1;AN=188;BQB=0.433496;DP=2732;DP4=1779,917,16,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.77219e-12;MQSB=0.92392;RPB=0.288202;SGB=46.4225;VDB=0.967487;EFF=INTRON(MODIFIER||||759|LOC_Os11g08569|protein_coding|CODING|LOC_Os11g08569.1|17|1) FN-312.SNP.11:4555215 chr11:004555215 0 W/4555215-4555215 FN-312 Single Base Substitution G-A INTRON HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN399-S.SNP.11:4556000 chr11:004556000 0 W/4556000-4556000 FN399-S Single Base Substitution G-A INTRON HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN267-S.SNP.11:4558402 chr11:004558402 0 W/4558402-4558402 FN267-S Single Base Substitution C-T INTRON HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3450-S.SNP.11:4560817 chr11:004560817 0 W/4560817-4560817 FN3450-S SNP T -> G AC=1;AN=184;BQB=0.998668;DP=2148;DP4=1030,1055,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.97278e-08;MQSB=0.926523;RPB=0.738226;SGB=48.7425;VDB=0.376267;EFF=INTRON(MODIFIER||||269|LOC_Os11g08590|protein_coding|CODING|LOC_Os11g08590.1|8|1) FN1097-S.SNP.11:4562081 chr11:004562081 0 W/4562081-4562081 FN1097-S Single Base Substitution T-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2673-S.SNP.11:4563823 chr11:004563823 0 W/4563823-4563823 FN2673-S SNP C -> T AC=1;AN=200;BQB=0.714254;DP=4941;DP4=2486,2209,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.09912e-11;MQSB=0.457403;RPB=0.29885;SGB=42.5108;VDB=0.70848;EFF=INTRON(MODIFIER||||269|LOC_Os11g08590|protein_coding|CODING|LOC_Os11g08590.1|6|1) FN2351.SNP.11:4577170 chr11:004577170 0 W/4577170-4577170 FN2351 SNP G -> A AC=1;AN=192;BQB=0.81808;DP=4794;DP4=2250,2232,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39932e-05;MQSB=0.999963;RPB=0.40375;SGB=39.78;VDB=0.508984;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P1305L|1411|LOC_Os11g08610|protein_coding|CODING|LOC_Os11g08610.1|6|1) FN915-S.SNP.11:4579083 chr11:004579083 0 W/4579083-4579083 FN915-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g08610 retrotransposon protein, putative, unclassified, expressed SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2385.SNP.11:4580771 chr11:004580771 0 W/4580771-4580771 FN2385 SNP C -> T AC=2;AN=192;BQB=0.928534;DP=4972;DP4=2633,2029,45,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.84962e-39;MQSB=0.998912;RPB=0.597161;SGB=250.077;VDB=0.586684;EFF=INTRON(MODIFIER||||1411|LOC_Os11g08610|protein_coding|CODING|LOC_Os11g08610.1|4|1) FN3956-S.SNP.11:4581884 chr11:004581884 0 W/4581884-4581884 FN3956-S SNP G -> C AC=1;AN=168;BQB=0.999939;DP=2526;DP4=1147,1278,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.63542e-09;MQSB=0.962747;RPB=0.992961;SGB=45.0404;VDB=0.662398;EFF=INTRON(MODIFIER||||1411|LOC_Os11g08610|protein_coding|CODING|LOC_Os11g08610.1|1|1) W278-3-1.SNP.11:4583494 chr11:004583494 0 W/4583494-4583494 W278-3-1 Single Base Substitution G-A INTRON HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN419-S.SNP.11:4585600 chr11:004585600 0 W/4585600-4585600 FN419-S Single Base Substitution C-G INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2276-S.SNP.11:4587224 chr11:004587224 0 W/4587224-4587224 FN2276-S SNP G -> A AC=1;AN=190;BQB=0.351489;DP=4581;DP4=2104,2175,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000218293;MQB=1.35968e-14;MQSB=0.200618;RPB=0.996497;SGB=117.403;VDB=0.657334;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R234K|784|LOC_Os11g08620|protein_coding|CODING|LOC_Os11g08620.1|2|1) FN-216.SNP.11:4590638 chr11:004590638 0 W/4590638-4590638 FN-216 Single Base Substitution G-C INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN3778-S.SNP.11:4596728 chr11:004596728 0 W/4596728-4596728 FN3778-S SNP A -> G AC=1;AN=190;BQB=0.898473;DP=2839;DP4=1305,1417,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41499e-11;MQSB=0.750483;RPB=0.858919;SGB=53.8699;VDB=0.885436;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.11:4615621 chr11:004615621 0 W/4615621-4615621 FN523-S Single Base Substitution G-A INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.11:4615621 chr11:004615621 0 W/4615621-4615621 FN532-S Single Base Substitution G-A INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. CW-631-3-1.SNP.11:4616114 chr11:004616114 0 W/4616114-4616114 CW-631-3-1 Single Base Substitution A-G INTRON HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN1673-S.SNP.11:4630666 chr11:004630666 0 W/4630666-4630666 FN1673-S SNP A -> C AC=2;AN=188;BQB=0.611995;DP=4028;DP4=1821,2146,17,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.99743e-18;MQSB=0.996901;RPB=0.241881;SGB=89.6585;VDB=0.12124;EFF=INTRON(MODIFIER||||981|LOC_Os11g08670|protein_coding|CODING|LOC_Os11g08670.1|7|1) FN840-S.SNP.11:4633917 chr11:004633917 0 W/4633917-4633917 FN840-S Single Base Substitution A-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN840-S.SNP.11:4633918 chr11:004633918 0 W/4633918-4633918 FN840-S Single Base Substitution G-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN1255-S.SNP.11:4661040 chr11:004661040 0 W/4661040-4661040 FN1255-S Single Base Substitution G-A INTRON HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN493-S.SNP.11:4680192 chr11:004680192 0 W/4680192-4680192 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN4179-S.SNP.11:4685759 chr11:004685759 0 W/4685759-4685759 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.986787;DP=1640;DP4=822,711,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.67122e-08;MQSB=0.809362;RPB=0.871661;SGB=41.7633;VDB=0.467639;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.11:4685760 chr11:004685760 0 W/4685760-4685760 FN4179-S SNP G -> A AC=1;AN=170;BQB=0.614177;DP=1629;DP4=816,718,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.15649e-08;MQSB=0.839823;RPB=0.542825;SGB=56.7575;VDB=0.321842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.11:4690594 chr11:004690594 0 W/4690594-4690594 FN2440 SNP G -> T AC=1;AN=200;BQB=0.850448;DP=4629;DP4=2002,2367,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.05251e-11;MQSB=0.922754;RPB=0.998294;SGB=51.0851;VDB=0.999675;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.11:4690950 chr11:004690950 0 W/4690950-4690950 FN2432 SNP C -> A AC=1;AN=200;BQB=0.976636;DP=4661;DP4=2228,2192,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000214546;MQB=6.89386e-06;MQSB=0.0742401;RPB=0.684629;SGB=63.4749;VDB=0.557919;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.11:4698362 chr11:004698362 0 W/4698362-4698362 FN857-S Single Base Substitution C-A INTRON HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2673-S.SNP.11:4730273 chr11:004730273 0 W/4730273-4730273 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.922418;DP=4716;DP4=2355,2063,15,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.20414e-20;MQSB=0.994076;RPB=0.979032;SGB=112.373;VDB=0.308302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.11:4745438 chr11:004745438 0 W/4745438-4745438 FN3597-S SNP A -> G AC=1;AN=188;BQB=0.75772;DP=2711;DP4=1344,1328,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.08514e-08;MQSB=0.999866;RPB=0.816156;SGB=50.1574;VDB=0.9278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.11:4747049 chr11:004747049 0 W/4747049-4747049 FN2622-S SNP G -> A AC=1;AN=200;BQB=0.923919;DP=4609;DP4=2203,2060,21,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.74977e-20;MQSB=0.693927;RPB=0.900364;SGB=101.557;VDB=0.42181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.11:4747050 chr11:004747050 0 W/4747050-4747050 FN2622-S SNP T -> A AC=1;AN=200;BQB=0.238031;DP=4623;DP4=2288,2037,22,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04094e-20;MQSB=0.476571;RPB=0.754096;SGB=68.5625;VDB=0.278191;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.11:4748395 chr11:004748395 0 W/4748395-4748395 FN1490-S Single Base Substitution A-T INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN854-S.SNP.11:4750274 chr11:004750274 0 W/4750274-4750274 FN854-S Single Base Substitution A-G INTERGENIC HOMO SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2790-S.SNP.11:4751276 chr11:004751276 0 W/4751276-4751276 FN2790-S SNP G -> C AC=2;AN=198;BQB=0.897079;DP=3999;DP4=2192,1591,25,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.54742e-15;MQSB=0.847051;RPB=0.995155;SGB=164.427;VDB=0.497841;EFF=INTERGENIC(MODIFIER||||||||||1) FN3914-S.SNP.11:4757128 chr11:004757128 0 W/4757128-4757128 FN3914-S SNP C -> T AC=1;AN=158;BQB=0.992942;DP=2203;DP4=924,1192,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=0.00145416;MQSB=0.996922;RPB=0.268473;SGB=51.4366;VDB=0.422093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.11:4759739 chr11:004759739 0 W/4759739-4759739 FN2181-S SNP A -> C AC=1;AN=190;BQB=0.401012;DP=4791;DP4=2367,2060,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01394e-10;MQSB=0.989312;RPB=0.172871;SGB=36.4291;VDB=0.586203;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.11:4768019 chr11:004768019 0 W/4768019-4768019 FN4161-S SNP G -> T AC=2;AN=170;BQB=0.448667;DP=2531;DP4=1196,1237,18,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.16979e-17;MQSB=0.938919;RPB=0.495556;SGB=110.616;VDB=0.483255;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L695|1096|LOC_Os11g08980|protein_coding|CODING|LOC_Os11g08980.1|20|1) FN3946-S.SNP.11:4777627 chr11:004777627 0 W/4777627-4777627 FN3946-S SNP G -> A AC=1;AN=168;BQB=0.994964;DP=2187;DP4=1501,614,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0160037;MQB=0.0671514;MQSB=0;RPB=0.441776;SGB=41.6096;VDB=0.156172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G232S|296|LOC_Os11g08990|protein_coding|CODING|LOC_Os11g08990.1|2|1) FN2435.SNP.11:4778703 chr11:004778703 0 W/4778703-4778703 FN2435 SNP T -> G AC=2;AN=200;BQB=0.970673;DP=4934;DP4=2088,2395,22,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.7446e-25;MQSB=0.354141;RPB=0.0483866;SGB=67.2761;VDB=0.85585;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.11:4784101 chr11:004784101 0 W/4784101-4784101 FN692-S Single Base Substitution A-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN-221.SNP.11:4784172 chr11:004784172 0 W/4784172-4784172 FN-221 Single Base Substitution T-G INTERGENIC HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN4179-S.SNP.11:4784956 chr11:004784956 0 W/4784956-4784956 FN4179-S SNP G -> C AC=1;AN=170;BQB=0.99951;DP=2118;DP4=1126,922,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01279e-06;MQSB=0.980764;RPB=0.992035;SGB=52.3148;VDB=0.553116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2106-S.SNP.11:4793867 chr11:004793867 0 W/4793867-4793867 FN2106-S SNP G -> A AC=2;AN=168;BQB=0.997318;DP=3746;DP4=1774,1852,29,29;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.75904e-26;MQSB=0.995605;RPB=0.591311;SGB=-185.414;VDB=0.726528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.11:4803679 chr11:004803679 0 W/4803679-4803679 FN2098-S SNP C -> T AC=2;AN=168;BQB=0.172698;DP=4398;DP4=2075,2227,43,28;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=1.20801e-11;MQSB=0.515736;RPB=0.971142;SGB=-445.088;VDB=0.753974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1286-S.SNP.11:4804912 chr11:004804912 0 W/4804912-4804912 FN1286-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1286-S.SNP.11:4804918 chr11:004804918 0 W/4804918-4804918 FN1286-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN428-S.SNP.11:4808469 chr11:004808469 0 W/4808469-4808469 FN428-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1176-S.SNP.11:4809713 chr11:004809713 0 W/4809713-4809713 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-279.SNP.11:4811654 chr11:004811654 0 W/4811654-4811654 FN-279 Single Base Substitution C-A INTRON HET SNo: 276, Mutant_ID: FN-279, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-392.SNP.11:4827422 chr11:004827422 0 W/4827422-4827422 FN-392 Single Base Substitution C-T INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN2581-S.SNP.11:4827839 chr11:004827839 0 W/4827839-4827839 FN2581-S SNP C -> T AC=1;AN=198;BQB=0.800273;DP=4139;DP4=2066,1738,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=6.46364e-06;MQSB=0.00710439;RPB=0.41952;SGB=4.56404;VDB=0.699537;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.11:4829544 chr11:004829544 0 W/4829544-4829544 FN2789-S SNP C -> T AC=1;AN=198;BQB=0.454202;DP=3925;DP4=1798,1919,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.82698e-09;MQSB=0.866246;RPB=0.507781;SGB=31.9395;VDB=0.303136;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.11:4847798 chr11:004847798 0 W/4847798-4847798 FN1302-S Single Base Substitution T-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2174-S.SNP.11:4847875 chr11:004847875 0 W/4847875-4847875 FN2174-S SNP G -> A AC=1;AN=168;BQB=0.693091;DP=3883;DP4=1723,2089,3,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.81002e-08;MQSB=0.852128;RPB=0.365708;SGB=-38.9357;VDB=0.309311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3421-S.SNP.11:4848926 chr11:004848926 0 W/4848926-4848926 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.997026;DP=2906;DP4=1521,1304,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19854e-08;MQSB=0.902878;RPB=0.330121;SGB=53.2642;VDB=0.17733;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.11:4849964 chr11:004849964 0 W/4849964-4849964 FN1550-S Single Base Substitution C-A INTERGENIC Homo SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. W252-6-1.SNP.11:4859491 chr11:004859491 0 W/4859491-4859491 W252-6-1 Single Base Substitution T-A INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2094-S.SNP.11:4859984 chr11:004859984 0 W/4859984-4859984 FN2094-S SNP C -> A AC=1;AN=168;BQB=0.118009;DP=4143;DP4=1965,2139,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.63433e-08;MQSB=0.921488;RPB=0.890074;SGB=-68.0681;VDB=0.669223;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.11:4865078 chr11:004865078 0 W/4865078-4865078 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.990786;DP=2426;DP4=1099,1201,8,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.63525e-10;MQSB=0.986164;RPB=0.633464;SGB=55.3328;VDB=0.3141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3786-S.SNP.11:4874321 chr11:004874321 0 W/4874321-4874321 FN3786-S SNP T -> A AC=2;AN=190;BQB=0.97963;DP=2324;DP4=1079,1125,13,5;HOB=0.020831;ICB=0.494793;MQ=32;MQ0F=0.10241;MQB=0.652629;MQSB=1.4013e-45;RPB=0.586949;SGB=53.8699;VDB=0.311944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.11:4879410 chr11:004879410 0 W/4879410-4879410 FN2231-S SNP T -> C AC=1;AN=190;BQB=0.905373;DP=5193;DP4=2536,2321,11,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.46172e-17;MQSB=0.772911;RPB=0.88366;SGB=89.4087;VDB=0.311553;EFF=INTERGENIC(MODIFIER||||||||||1) FN853-S.SNP.11:4884077 chr11:004884077 0 W/4884077-4884077 FN853-S Single Base Substitution C-T INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN1505-S.SNP.11:4886097 chr11:004886097 0 W/4886097-4886097 FN1505-S Single Base Substitution C-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1520-S.SNP.11:4891997 chr11:004891997 0 W/4891997-4891997 FN1520-S Single Base Substitution A-G INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1214-S.SNP.11:4900864 chr11:004900864 0 W/4900864-4900864 FN1214-S Single Base Substitution G-A INTRON HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2410.SNP.11:4921806 chr11:004921806 0 W/4921806-4921806 FN2410 SNP A -> T AC=1;AN=200;BQB=0.86819;DP=4174;DP4=1988,1946,13,12;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0;MQB=0.0838173;MQSB=0.00661157;RPB=0.996308;SGB=109.527;VDB=0.146983;EFF=INTRON(MODIFIER||||674|LOC_Os11g09170|protein_coding|CODING|LOC_Os11g09170.1|4|1),INTRON(MODIFIER||||442|LOC_Os11g09170|protein_coding|CODING|LOC_Os11g09170.2|3|1) FN389-S.SNP.11:4963855 chr11:004963855 0 W/4963855-4963855 FN389-S Single Base Substitution G-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3707-S.SNP.11:4991480 chr11:004991480 0 W/4991480-4991480 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.877657;DP=2874;DP4=1370,1411,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.19954e-11;MQSB=0.846631;RPB=0.990787;SGB=76.4186;VDB=0.944591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S238L|273|LOC_Os11g09310|protein_coding|CODING|LOC_Os11g09310.1|2|1) FN-364.SNP.11:5011551 chr11:005011551 0 W/5011551-5011551 FN-364 Single Base Substitution C-A INTRON HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN4148-S.SNP.11:5084182 chr11:005084182 0 W/5084182-5084182 FN4148-S SNP C -> T AC=2;AN=170;BQB=0.780442;DP=2291;DP4=1504,727,16,8;HOB=0.0232526;ICB=0.494188;MQ=38;MQ0F=0;MQB=5.97739e-06;MQSB=0.793671;RPB=0.651132;SGB=101.184;VDB=0.39844;EFF=INTRON(MODIFIER||||987|LOC_Os11g09474|protein_coding|CODING|LOC_Os11g09474.1|4|1) FN2328.SNP.11:5092915 chr11:005092915 0 W/5092915-5092915 FN2328 SNP C -> T AC=2;AN=192;BQB=0.73865;DP=4769;DP4=2126,2270,29,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.1529e-29;MQSB=0.982991;RPB=0.992371;SGB=193.047;VDB=0.102078;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q84|457|LOC_Os11g09478|protein_coding|CODING|LOC_Os11g09478.1|2|1) FN-125.SNP.11:5099667 chr11:005099667 0 W/5099667-5099667 FN-125 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN4147-S.SNP.11:5128697 chr11:005128697 0 W/5128697-5128697 FN4147-S SNP C -> T AC=2;AN=170;BQB=0.978573;DP=2372;DP4=1229,1051,7,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.44618e-08;MQSB=0.056694;RPB=0.839238;SGB=65.6427;VDB=0.641471;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.11:5128699 chr11:005128699 0 W/5128699-5128699 FN4147-S SNP G -> A AC=2;AN=170;BQB=0.966192;DP=2366;DP4=1239,1055,6,9;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=7.11956e-09;MQSB=0.0647587;RPB=0.767462;SGB=61.2001;VDB=0.619182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.11:5135399 chr11:005135399 0 W/5135399-5135399 FN3552-S SNP C -> T AC=2;AN=188;BQB=0.998706;DP=2489;DP4=1500,924,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3753e-12;MQSB=0.891135;RPB=0.883277;SGB=78.5038;VDB=0.744354;EFF=UTR_3_PRIME(MODIFIER||892||317|LOC_Os11g09600|protein_coding|CODING|LOC_Os11g09600.1|5|1) FN597-S.SNP.11:5135680 chr11:005135680 0 W/5135680-5135680 FN597-S Single Base Substitution T-A INTRON HET SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN495-S.SNP.11:5138956 chr11:005138956 0 W/5138956-5138956 FN495-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os11g09610 hypothetical protein SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN4114-S.SNP.11:5145770 chr11:005145770 0 W/5145770-5145770 FN4114-S SNP C -> A AC=1;AN=182;BQB=0.956107;DP=2976;DP4=1413,1509,5,10;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=7.10703e-10;MQSB=0.740981;RPB=0.869696;SGB=62.1548;VDB=0.833905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.11:5149227 chr11:005149227 0 W/5149227-5149227 FN3311-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g09630 OsFBX407 - F-box domain containing protein, expressed SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN2753-S.SNP.11:5149599 chr11:005149599 0 W/5149599-5149599 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.999991;DP=4944;DP4=2525,2128,13,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26991e-16;MQSB=0.949673;RPB=0.912176;SGB=90.7419;VDB=0.692964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R121W|420|LOC_Os11g09630|protein_coding|CODING|LOC_Os11g09630.1|1|1) FN2453.SNP.11:5159050 chr11:005159050 0 W/5159050-5159050 FN2453 SNP C -> T AC=2;AN=200;BQB=0.416311;DP=3832;DP4=1918,1598,20,14;HOB=0.0198;ICB=0.495051;MQ=34;MQ0F=0.0558455;MQB=0.00610956;MQSB=3.94193e-14;RPB=0.866073;SGB=112.373;VDB=0.191398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2407.SNP.11:5161327 chr11:005161327 0 W/5161327-5161327 FN2407 SNP A -> G AC=1;AN=200;BQB=0.918667;DP=3952;DP4=1754,1808,11,11;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0642713;MQB=0.192454;MQSB=1.35995e-13;RPB=0.942813;SGB=42.5108;VDB=0.891806;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.11:5162575 chr11:005162575 0 W/5162575-5162575 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.957223;DP=2798;DP4=1490,1207,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.77078e-05;MQSB=0.0076723;RPB=0.323379;SGB=10.8904;VDB=0.0474189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.11:5164702 chr11:005164702 0 W/5164702-5164702 FN2794-S SNP T -> A AC=2;AN=198;BQB=0.314276;DP=4085;DP4=1982,1812,27,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.76415e-21;MQSB=0.963;RPB=0.605897;SGB=191.998;VDB=0.67973;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I410F|412|LOC_Os11g09670|protein_coding|CODING|LOC_Os11g09670.1|5|1),UTR_3_PRIME(MODIFIER||823||303|LOC_Os11g09670|protein_coding|CODING|LOC_Os11g09670.2|4|1) FN1124-S.SNP.11:5165402 chr11:005165402 0 W/5165402-5165402 FN1124-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3824-S.SNP.11:5174432 chr11:005174432 0 W/5174432-5174432 FN3824-S SNP A -> C AC=1;AN=190;BQB=0.899481;DP=2767;DP4=1291,1376,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.90735e-10;MQSB=0.999451;RPB=0.698332;SGB=33.8752;VDB=0.456196;EFF=INTRON(MODIFIER||||394|LOC_Os11g09690|protein_coding|CODING|LOC_Os11g09690.1|2|1) FN504-S.SNP.11:5181292 chr11:005181292 0 W/5181292-5181292 FN504-S Single Base Substitution A-G INTERGENIC HET SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-344.SNP.11:5193634 chr11:005193634 0 W/5193634-5193634 FN-344 Single Base Substitution C-G INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3319-S.SNP.11:5194799 chr11:005194799 0 W/5194799-5194799 FN3319-S SNP G -> A AC=2;AN=184;BQB=0.973241;DP=3262;DP4=1677,1465,13,10;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0;MQB=0.631864;MQSB=7.87805e-14;RPB=0.00313118;SGB=98.4821;VDB=0.05966;EFF=INTERGENIC(MODIFIER||||||||||1) FN-368.SNP.11:5201220 chr11:005201220 0 W/5201220-5201220 FN-368 Single Base Substitution C-T INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN736-S.SNP.11:5203825 chr11:005203825 0 W/5203825-5203825 FN736-S Single Base Substitution A-G INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN1028-S.SNP.11:5261028 chr11:005261028 0 W/5261028-5261028 FN1028-S Single Base Substitution C-A INTERGENIC HOMO SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN2446.SNP.11:5262854 chr11:005262854 0 W/5262854-5262854 FN2446 SNP A -> T AC=1;AN=200;BQB=0.715408;DP=4171;DP4=1611,1788,5,13;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0;MQB=5.10836e-09;MQSB=0.201788;RPB=0.810194;SGB=9.48993;VDB=0.00187095;EFF=INTRON(MODIFIER||||231|LOC_Os11g09840|protein_coding|CODING|LOC_Os11g09840.1|2|1) FN2467.SNP.11:5267825 chr11:005267825 0 W/5267825-5267825 FN2467 SNP T -> A AC=1;AN=200;BQB=0.105597;DP=5832;DP4=3236,1915,14,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00188615;MQB=0.142576;MQSB=1.54444e-27;RPB=0.424595;SGB=-38.0794;VDB=0.0562849;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.11:5269702 chr11:005269702 0 W/5269702-5269702 W502-3-4 Single Base Substitution C-G INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN761-S.SNP.11:5275698 chr11:005275698 0 W/5275698-5275698 FN761-S Single Base Substitution T-C INTERGENIC HOMO SNo: 683, Mutant_ID: FN761-S, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN695-S.SNP.11:5277175 chr11:005277175 0 W/5277175-5277175 FN695-S Single Base Substitution C-A INTRON HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN493-S.SNP.11:5278406 chr11:005278406 0 W/5278406-5278406 FN493-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g09850 expressed protein SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN3496-S.SNP.11:5278830 chr11:005278830 0 W/5278830-5278830 FN3496-S SNP T -> A AC=2;AN=188;BQB=0.99011;DP=2652;DP4=1282,1221,13,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62986e-13;MQSB=0.908129;RPB=0.982239;SGB=108.042;VDB=0.78883;EFF=INTRON(MODIFIER||||138|LOC_Os11g09850|protein_coding|CODING|LOC_Os11g09850.1|4|1),INTRON(MODIFIER||||136|LOC_Os11g09850|protein_coding|CODING|LOC_Os11g09850.2|5|1) FN3390-S.SNP.11:5283597 chr11:005283597 0 W/5283597-5283597 FN3390-S SNP C -> T AC=2;AN=184;BQB=0.920485;DP=2631;DP4=1246,1246,7,7;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=2.12358e-07;MQSB=0.347954;RPB=0.881577;SGB=57.786;VDB=0.310396;EFF=UTR_3_PRIME(MODIFIER||1008||72|LOC_Os11g09864|protein_coding|CODING|LOC_Os11g09864.1|1|1),INTRON(MODIFIER||||72|LOC_Os11g09864|protein_coding|CODING|LOC_Os11g09864.2|1|1) FN4023-S.SNP.11:5288715 chr11:005288715 0 W/5288715-5288715 FN4023-S SNP A -> T AC=1;AN=168;BQB=0.999848;DP=1973;DP4=799,1053,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.03081e-05;MQSB=0.251586;RPB=0.995992;SGB=56.6036;VDB=0.570811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.11:5295345 chr11:005295345 0 W/5295345-5295345 FN3476-S SNP A -> T AC=2;AN=184;BQB=0.999088;DP=3314;DP4=1440,1692,20,22;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.0006035;MQB=9.05714e-09;MQSB=0.0547425;RPB=0.958058;SGB=137.88;VDB=0.658301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.11:5295704 chr11:005295704 0 W/5295704-5295704 FN2138-S SNP C -> A AC=2;AN=168;BQB=0.613288;DP=1449;DP4=904,482,15,12;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.00207039;MQB=3.61116e-08;MQSB=0.0566732;RPB=0.537757;SGB=109.425;VDB=0.504885;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.11:5299094 chr11:005299094 0 W/5299094-5299094 FN852-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g09900 expressed protein SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN780-S.SNP.11:5299755 chr11:005299755 0 W/5299755-5299755 FN780-S Single Base Substitution A-T INTERGENIC HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1573-S.SNP.11:5300671 chr11:005300671 0 W/5300671-5300671 FN1573-S Single Base Substitution T-G INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN2707-S.SNP.11:5302271 chr11:005302271 0 W/5302271-5302271 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.695108;DP=3814;DP4=1918,1622,3,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00185495;MQSB=0.768593;RPB=0.752046;SGB=45.0543;VDB=0.381414;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.11:5305014 chr11:005305014 0 W/5305014-5305014 FN_N1-169-1 Single Base Substitution T-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2464.SNP.11:5306025 chr11:005306025 0 W/5306025-5306025 FN2464 SNP C -> T AC=2;AN=200;BQB=0.261252;DP=4329;DP4=1958,1961,18,16;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.002541;MQB=2.62987e-13;MQSB=4.46057e-20;RPB=0.317391;SGB=35.1726;VDB=0.228772;EFF=INTRON(MODIFIER||||2188|LOC_Os11g09919|protein_coding|CODING|LOC_Os11g09919.1|12|1) FN2464.SNP.11:5306034 chr11:005306034 0 W/5306034-5306034 FN2464 SNP G -> A AC=2;AN=200;BQB=0.324938;DP=4400;DP4=1944,2094,21,16;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00340909;MQB=4.84113e-12;MQSB=4.40122e-22;RPB=0.974923;SGB=81.5883;VDB=0.194756;EFF=INTRON(MODIFIER||||2188|LOC_Os11g09919|protein_coding|CODING|LOC_Os11g09919.1|12|1) FN2540-S.SNP.11:5306265 chr11:005306265 0 W/5306265-5306265 FN2540-S SNP T -> G AC=1;AN=186;BQB=0.060405;DP=3866;DP4=1950,1729,8,3;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0;MQB=0.000101646;MQSB=0.323462;RPB=0.283489;SGB=44.9538;VDB=0.417004;EFF=INTRON(MODIFIER||||2188|LOC_Os11g09919|protein_coding|CODING|LOC_Os11g09919.1|12|1) FN4077-S.SNP.11:5306284 chr11:005306284 0 W/5306284-5306284 FN4077-S SNP C -> T AC=2;AN=182;BQB=0.998988;DP=3115;DP4=1700,1313,9,15;HOB=0.0217365;ICB=0.494567;MQ=46;MQ0F=0;MQB=1.14941e-11;MQSB=0.890173;RPB=0.69138;SGB=102.753;VDB=0.152498;EFF=INTRON(MODIFIER||||2188|LOC_Os11g09919|protein_coding|CODING|LOC_Os11g09919.1|12|1) FN360-S.SNP.11:5309233 chr11:005309233 0 W/5309233-5309233 FN360-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2530-S.SNP.11:5323856 chr11:005323856 0 W/5323856-5323856 FN2530-S SNP T -> C AC=1;AN=188;BQB=0.265754;DP=3830;DP4=1717,1908,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=5.25828e-07;MQSB=0.0809931;RPB=0.970146;SGB=21.559;VDB=0.580506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.11:5324788 chr11:005324788 0 W/5324788-5324788 FN3439-S SNP A -> G AC=1;AN=184;BQB=0.964242;DP=3077;DP4=1343,1665,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000124178;MQSB=0.994551;RPB=0.98774;SGB=32.2261;VDB=0.42044;EFF=UTR_3_PRIME(MODIFIER||249||783|LOC_Os11g09940|protein_coding|CODING|LOC_Os11g09940.1|3|1) FN4234-S.SNP.11:5341922 chr11:005341922 0 W/5341922-5341922 FN4234-S SNP G -> A AC=2;AN=170;BQB=0.885027;DP=1621;DP4=806,740,5,5;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=0.000388531;MQSB=0.00142971;RPB=0.852037;SGB=38.987;VDB=0.850504;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.11:5345233 chr11:005345233 0 W/5345233-5345233 FN708-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g09970 OsFBX411 - F-box domain containing protein, expressed SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1688-S.SNP.11:5366296 chr11:005366296 0 W/5366296-5366296 FN1688-S SNP C -> G AC=1;AN=188;BQB=0.160363;DP=3466;DP4=1775,1652,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=3.2231e-05;MQSB=0.0978438;RPB=0.999246;SGB=10.1681;VDB=0.176401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1688-S.SNP.11:5366297 chr11:005366297 0 W/5366297-5366297 FN1688-S SNP T -> A AC=1;AN=188;BQB=0.136692;DP=3485;DP4=1781,1657,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=1.8563e-06;MQSB=0.117259;RPB=0.873336;SGB=31.1628;VDB=0.0891879;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.11:5369142 chr11:005369142 0 W/5369142-5369142 FN1446-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN840-S.SNP.11:5369463 chr11:005369463 0 W/5369463-5369463 FN840-S Single Base Substitution G-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN3982-S.SNP.11:5385355 chr11:005385355 0 W/5385355-5385355 FN3982-S SNP T -> C AC=1;AN=168;BQB=0.791567;DP=2452;DP4=1031,1287,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000696983;MQSB=0.995287;RPB=0.641095;SGB=34.4498;VDB=0.54263;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.11:5388470 chr11:005388470 0 W/5388470-5388470 FN4253-S SNP G -> T AC=2;AN=170;BQB=0.999526;DP=2193;DP4=1077,1036,6,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.01229e-08;MQSB=0.960732;RPB=0.843131;SGB=38.3207;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.11:5388829 chr11:005388829 0 W/5388829-5388829 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN4111-S.SNP.11:5391184 chr11:005391184 0 W/5391184-5391184 FN4111-S SNP T -> A AC=1;AN=182;BQB=0.881788;DP=2900;DP4=1445,1337,20,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.51837e-17;MQSB=0.999797;RPB=0.00911049;SGB=125.307;VDB=0.0890111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.11:5400145 chr11:005400145 0 W/5400145-5400145 FN2375 SNP G -> A AC=1;AN=192;BQB=0.725429;DP=4314;DP4=2158,1861,10,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000463607;MQB=9.38976e-07;MQSB=0.749548;RPB=0.859826;SGB=36.2157;VDB=0.127562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A11T|1077|LOC_Os11g10060|protein_coding|CODING|LOC_Os11g10060.1|1|1) FN3484-S.SNP.11:5401911 chr11:005401911 0 W/5401911-5401911 FN3484-S SNP T -> A AC=1;AN=184;BQB=0.65061;DP=3115;DP4=1314,1650,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12762e-09;MQSB=0.843615;RPB=0.777798;SGB=63.9222;VDB=0.815801;EFF=SPLICE_SITE_REGION(LOW||||1077|LOC_Os11g10060|protein_coding|CODING|LOC_Os11g10060.1|4|1),INTRON(MODIFIER||||1077|LOC_Os11g10060|protein_coding|CODING|LOC_Os11g10060.1|4|1) FN-300.SNP.11:5432521 chr11:005432521 0 W/5432521-5432521 FN-300 Single Base Substitution G-A INTERGENIC HET SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN3834-S.SNP.11:5435663 chr11:005435663 0 W/5435663-5435663 FN3834-S SNP A -> T AC=2;AN=190;BQB=0.834152;DP=2606;DP4=1283,1236,13,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.68776e-09;MQSB=0.147881;RPB=0.46916;SGB=103.742;VDB=0.259808;EFF=INTERGENIC(MODIFIER||||||||||1) FN-37.SNP.11:5439090 chr11:005439090 0 W/5439090-5439090 FN-37 Single Base Substitution T-C INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN378-S.SNP.11:5452620 chr11:005452620 0 W/5452620-5452620 FN378-S Single Base Substitution T-C INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN2129-S.SNP.11:5453446 chr11:005453446 0 W/5453446-5453446 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.815793;DP=3996;DP4=1896,2036,14,24;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=3.98984e-15;MQSB=0.365424;RPB=0.806689;SGB=78.0935;VDB=0.0814174;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.11:5484535 chr11:005484535 0 W/5484535-5484535 FN745-S Single Base Substitution G-C INTERGENIC HOMO SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN3715-S.SNP.11:5488045 chr11:005488045 0 W/5488045-5488045 FN3715-S SNP A -> T AC=1;AN=190;BQB=0.995038;DP=3085;DP4=1654,1253,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.56485e-08;MQSB=0.938065;RPB=0.656415;SGB=58.2031;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.11:5492881 chr11:005492881 0 W/5492881-5492881 FN915-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g10140 flavin monooxygenase, putative, expressed SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN2324.SNP.11:5495054 chr11:005495054 0 W/5495054-5495054 FN2324 SNP G -> T AC=1;AN=192;BQB=0.958709;DP=4759;DP4=2345,2145,18,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.05472e-14;MQSB=0.920034;RPB=0.942065;SGB=108.547;VDB=0.895508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.11:5502704 chr11:005502704 0 W/5502704-5502704 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.545257;DP=5546;DP4=2899,2150,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.307609;MQB=0.678333;MQSB=7.03536e-16;RPB=0.332634;SGB=-13.222;VDB=0.331974;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.11:5506348 chr11:005506348 0 W/5506348-5506348 W500-4-7-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN-14.SNP.11:5516697 chr11:005516697 0 W/5516697-5516697 FN-14 Single Base Substitution T-G INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN4078-S.SNP.11:5529266 chr11:005529266 0 W/5529266-5529266 FN4078-S SNP T -> A AC=1;AN=182;BQB=0.942139;DP=2181;DP4=849,1246,3,4;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=0.00367566;MQSB=5.75498e-06;RPB=0.999673;SGB=26.0691;VDB=0.313883;EFF=INTERGENIC(MODIFIER||||||||||1) FN1350-S.SNP.11:5533857 chr11:005533857 0 W/5533857-5533857 FN1350-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g10200 OsFBX413 - F-box domain containing protein, expressed SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN-68.SNP.11:5539283 chr11:005539283 0 W/5539283-5539283 FN-68 Single Base Substitution G-A INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2533-S.SNP.11:5539483 chr11:005539483 0 W/5539483-5539483 FN2533-S SNP A -> T AC=1;AN=198;BQB=0.977624;DP=4517;DP4=2017,2295,2,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.39846e-06;MQSB=0.762187;RPB=0.825092;SGB=40.3588;VDB=0.0362545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.11:5543321 chr11:005543321 0 W/5543321-5543321 FN3766-S SNP C -> T AC=2;AN=190;BQB=0.648869;DP=2520;DP4=1225,1019,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.87727e-11;MQSB=0.985553;RPB=0.60893;SGB=75.1932;VDB=0.690772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.11:5544898 chr11:005544898 0 W/5544898-5544898 FN1442-S Single Base Substitution C-T INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1689-S.SNP.11:5553139 chr11:005553139 0 W/5553139-5553139 FN1689-S SNP T -> G AC=1;AN=188;BQB=0.0970587;DP=2688;DP4=1910,747,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.53479e-05;MQSB=1.85495e-06;RPB=0.879425;SGB=8.62479;VDB=0.844448;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||528|LOC_Os11g10230|protein_coding|CODING|LOC_Os11g10230.1|3|1),INTRON(MODIFIER||||528|LOC_Os11g10230|protein_coding|CODING|LOC_Os11g10230.1|2|1);LOF=(LOC_Os11g10230|LOC_Os11g10230|1|1.00) FN-48.SNP.11:5553195 chr11:005553195 0 W/5553195-5553195 FN-48 Single Base Substitution T-C INTRON Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2340.SNP.11:5556522 chr11:005556522 0 W/5556522-5556522 FN2340 SNP T -> C AC=2;AN=192;BQB=0.236767;DP=5379;DP4=2236,2812,21,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.68334e-24;MQSB=0.990991;RPB=0.987167;SGB=108.409;VDB=0.249821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.11:5558222 chr11:005558222 0 W/5558222-5558222 FN2165-S SNP T -> A AC=2;AN=168;BQB=0.994555;DP=4003;DP4=2280,1653,30,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.0431e-24;MQSB=0.956686;RPB=0.67988;SGB=-3.74047;VDB=0.00415001;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T423|443|LOC_Os11g10240|protein_coding|CODING|LOC_Os11g10240.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|acA/acT|T423|425|LOC_Os11g10240|protein_coding|CODING|LOC_Os11g10240.2|3|1) FN2165-S.SNP.11:5558223 chr11:005558223 0 W/5558223-5558223 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.648216;DP=3974;DP4=2265,1639,28,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.41232e-22;MQSB=0.980076;RPB=0.916756;SGB=-53.1653;VDB=0.00729288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T423I|443|LOC_Os11g10240|protein_coding|CODING|LOC_Os11g10240.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T423I|425|LOC_Os11g10240|protein_coding|CODING|LOC_Os11g10240.2|3|1) FN2082-S.SNP.11:5569346 chr11:005569346 0 W/5569346-5569346 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.000180485;DP=3760;DP4=1969,1739,16,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.05137e-07;MQSB=0.816912;RPB=0.446428;SGB=-133.625;VDB=0.254581;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.11:5570127 chr11:005570127 0 W/5570127-5570127 FN564-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g10260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN1433-S.SNP.11:5573091 chr11:005573091 0 W/5573091-5573091 FN1433-S Single Base Substitution A-G INTRON HOMO SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2320.SNP.11:5573370 chr11:005573370 0 W/5573370-5573370 FN2320 SNP A -> G AC=1;AN=192;BQB=0.415971;DP=4516;DP4=2335,1874,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000221435;MQB=5.23328e-12;MQSB=0.865799;RPB=0.737132;SGB=39.1713;VDB=0.057727;EFF=INTRON(MODIFIER||||1093|LOC_Os11g10260|protein_coding|CODING|LOC_Os11g10260.1|6|1) FN1069-S.SNP.11:5578972 chr11:005578972 0 W/5578972-5578972 FN1069-S Single Base Substitution C-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1436-S.SNP.11:5579410 chr11:005579410 0 W/5579410-5579410 FN1436-S Single Base Substitution C-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN2600-S.SNP.11:5579424 chr11:005579424 0 W/5579424-5579424 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.773116;DP=3771;DP4=1741,1823,16,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00106073;MQB=1.43509e-08;MQSB=0.9995;RPB=0.992954;SGB=18.9201;VDB=0.727505;EFF=INTERGENIC(MODIFIER||||||||||1) FN-89.SNP.11:5583683 chr11:005583683 0 W/5583683-5583683 FN-89 Single Base Substitution A-C INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2735-S.SNP.11:5592997 chr11:005592997 0 W/5592997-5592997 FN2735-S SNP C -> T AC=2;AN=200;BQB=0.184393;DP=4522;DP4=2090,2172,13,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.28343e-13;MQSB=0.970947;RPB=0.989838;SGB=22.3313;VDB=0.859726;EFF=UTR_3_PRIME(MODIFIER||227||1074|LOC_Os11g10310|protein_coding|CODING|LOC_Os11g10310.1|2|1) FN3800-S.SNP.11:5596974 chr11:005596974 0 W/5596974-5596974 FN3800-S SNP C -> A AC=1;AN=190;BQB=0.590538;DP=2272;DP4=1173,1004,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.03483e-05;MQSB=0.995549;RPB=0.838784;SGB=21.8853;VDB=0.851014;EFF=INTRON(MODIFIER||||1074|LOC_Os11g10310|protein_coding|CODING|LOC_Os11g10310.1|1|1) FN3657-S.SNP.11:5599580 chr11:005599580 0 W/5599580-5599580 FN3657-S SNP A -> T AC=1;AN=190;BQB=0.99936;DP=2650;DP4=1354,1179,11,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000377358;MQB=2.50015e-07;MQSB=0.990419;RPB=0.702438;SGB=46.7622;VDB=0.421008;EFF=INTRON(MODIFIER||||1074|LOC_Os11g10310|protein_coding|CODING|LOC_Os11g10310.1|1|1) FN2233-S.SNP.11:5610413 chr11:005610413 0 W/5610413-5610413 FN2233-S SNP G -> T AC=1;AN=190;BQB=0.676463;DP=3424;DP4=1658,1364,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4356e-07;MQSB=0.754308;RPB=0.985492;SGB=18.552;VDB=0.675449;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.11:5612353 chr11:005612353 0 W/5612353-5612353 FN3887-S SNP C -> T AC=2;AN=158;BQB=0.866568;DP=2178;DP4=1037,1036,22,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.99031e-22;MQSB=0.903655;RPB=0.824089;SGB=164.118;VDB=0.910389;EFF=INTRON(MODIFIER||||416|LOC_Os11g10330|protein_coding|CODING|LOC_Os11g10330.1|4|1) FN-86.SNP.11:5617750 chr11:005617750 0 W/5617750-5617750 FN-86 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g10340 OsFBX417 - F-box domain containing protein, expressed SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN1163-S.SNP.11:5622240 chr11:005622240 0 W/5622240-5622240 FN1163-S Single Base Substitution C-T INTRON HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2792-S.SNP.11:5623009 chr11:005623009 0 W/5623009-5623009 FN2792-S SNP A -> G AC=1;AN=198;BQB=0.526846;DP=4356;DP4=2193,1952,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.60458e-09;MQSB=0.805586;RPB=0.997794;SGB=58.1246;VDB=0.0803099;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.11:5623187 chr11:005623187 0 W/5623187-5623187 FN848-S Single Base Substitution A-G INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1173-S.SNP.11:5627050 chr11:005627050 0 W/5627050-5627050 FN1173-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN3822-S.SNP.11:5634389 chr11:005634389 0 W/5634389-5634389 FN3822-S SNP G -> A AC=1;AN=190;BQB=0.985305;DP=3022;DP4=1697,1231,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44583e-05;MQSB=0.961574;RPB=0.756913;SGB=30.8803;VDB=0.985061;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.11:5638900 chr11:005638900 0 W/5638900-5638900 FN875-S Single Base Substitution T-C INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1660-S.SNP.11:5645707 chr11:005645707 0 W/5645707-5645707 FN1660-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1735-S.SNP.11:5646325 chr11:005646325 0 W/5646325-5646325 FN1735-S SNP T -> A AC=1;AN=188;BQB=1.81784e-06;DP=3924;DP4=2013,1742,24,31;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000259438;MQSB=0.329522;RPB=0.0279092;SGB=-1244.11;VDB=0.0867867;EFF=INTRON(MODIFIER||||330|LOC_Os11g10400|protein_coding|CODING|LOC_Os11g10400.1|3|1) FN2450.SNP.11:5658758 chr11:005658758 0 W/5658758-5658758 FN2450 SNP A -> T AC=1;AN=200;BQB=0.54403;DP=4631;DP4=2391,2062,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.6796e-11;MQSB=0.655746;RPB=0.837317;SGB=58.2954;VDB=0.957376;EFF=UTR_3_PRIME(MODIFIER||24||889|LOC_Os11g10420|protein_coding|CODING|LOC_Os11g10420.2|5|1),INTRON(MODIFIER||||1208|LOC_Os11g10420|protein_coding|CODING|LOC_Os11g10420.1|5|1) FN2600-S.SNP.11:5673923 chr11:005673923 0 W/5673923-5673923 FN2600-S SNP C -> G AC=1;AN=198;BQB=0.995933;DP=3651;DP4=1861,1555,12,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.76841e-10;MQSB=0.687814;RPB=0.676196;SGB=67.9293;VDB=0.910016;EFF=INTERGENIC(MODIFIER||||||||||1) FN1422-S.SNP.11:5676749 chr11:005676749 0 W/5676749-5676749 FN1422-S Single Base Substitution A-G INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. W313-1-1-1-1.SNP.11:5676957 chr11:005676957 0 W/5676957-5676957 W313-1-1-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-221.SNP.11:5683448 chr11:005683448 0 W/5683448-5683448 FN-221 Single Base Substitution A-G INTRON HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN748-S.SNP.11:5689311 chr11:005689311 0 W/5689311-5689311 FN748-S Single Base Substitution G-A INTRON HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN693-S.SNP.11:5689698 chr11:005689698 0 W/5689698-5689698 FN693-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g10440 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN693-S.SNP.11:5689699 chr11:005689699 0 W/5689699-5689699 FN693-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN4152-S.SNP.11:5692424 chr11:005692424 0 W/5692424-5692424 FN4152-S SNP G -> A AC=1;AN=170;BQB=0.316072;DP=1689;DP4=1223,402,13,2;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.61165e-06;MQSB=1.98417e-05;RPB=0.830979;SGB=2.88981;VDB=0.015699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.11:5693263 chr11:005693263 0 W/5693263-5693263 FN3453-S SNP G -> T AC=1;AN=184;BQB=0.960782;DP=2872;DP4=825,1961,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84999e-05;MQSB=0.869002;RPB=0.344233;SGB=18.1394;VDB=0.44307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1702-S.SNP.11:5695385 chr11:005695385 0 W/5695385-5695385 FN1702-S SNP A -> G AC=1;AN=188;BQB=0.0544171;DP=3226;DP4=1832,1361,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0083695;MQB=0.0338627;MQSB=4.86537e-07;RPB=0.389248;SGB=-13.9132;VDB=0.944791;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P297|616|LOC_Os11g10450|protein_coding|CODING|LOC_Os11g10450.1|1|1) FN3580-S.SNP.11:5695418 chr11:005695418 0 W/5695418-5695418 FN3580-S SNP A -> G AC=2;AN=188;BQB=0.998898;DP=2771;DP4=1266,1439,12,12;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.0104655;MQB=6.38786e-10;MQSB=0.566178;RPB=0.939563;SGB=74.9605;VDB=0.427807;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C286|616|LOC_Os11g10450|protein_coding|CODING|LOC_Os11g10450.1|1|1) FN940-S.SNP.11:5707336 chr11:005707336 0 W/5707336-5707336 FN940-S Single Base Substitution G-A INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN806-S.SNP.11:5707395 chr11:005707395 0 W/5707395-5707395 FN806-S Single Base Substitution A-T INTERGENIC HET SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1285-S.SNP.11:5708148 chr11:005708148 0 W/5708148-5708148 FN1285-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1374-S.SNP.11:5723626 chr11:005723626 0 W/5723626-5723626 FN1374-S Single Base Substitution C-T INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN4189-S.SNP.11:5733968 chr11:005733968 0 W/5733968-5733968 FN4189-S SNP T -> C AC=1;AN=170;BQB=0.990457;DP=2016;DP4=903,993,4,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000496032;MQB=0.000662508;MQSB=0.907094;RPB=0.991596;SGB=21.2191;VDB=0.264054;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.11:5735237 chr11:005735237 0 W/5735237-5735237 FN677-S Single Base Substitution T-C INTERGENIC HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN2784-S.SNP.11:5736916 chr11:005736916 0 W/5736916-5736916 FN2784-S SNP G -> C AC=1;AN=198;BQB=0.566315;DP=3823;DP4=1814,1790,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000261575;MQB=7.37892e-06;MQSB=0.690198;RPB=0.401862;SGB=54.144;VDB=0.344456;EFF=INTERGENIC(MODIFIER||||||||||1) FN2129-S.SNP.11:5740953 chr11:005740953 0 W/5740953-5740953 FN2129-S SNP G -> A AC=1;AN=168;BQB=0.195059;DP=3375;DP4=1701,1636,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00118519;MQB=1.5625e-06;MQSB=0.870612;RPB=0.932792;SGB=-38.3665;VDB=0.195752;EFF=INTRON(MODIFIER||||1263|LOC_Os11g10500|protein_coding|CODING|LOC_Os11g10500.1|5|1) FN2383.SNP.11:5743622 chr11:005743622 0 W/5743622-5743622 FN2383 SNP T -> A AC=1;AN=192;BQB=0.405067;DP=6408;DP4=2930,3128,3,16;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0188826;MQB=0.00244718;MQSB=5.44736e-28;RPB=0.849847;SGB=34.0426;VDB=0.0311636;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.11:5743942 chr11:005743942 0 W/5743942-5743942 FN2233-S SNP C -> T AC=1;AN=190;BQB=0.978881;DP=5361;DP4=2284,2788,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01617e-07;MQSB=0.946056;RPB=0.992785;SGB=62.7569;VDB=0.68101;EFF=INTERGENIC(MODIFIER||||||||||1) FN3471-S.SNP.11:5754949 chr11:005754949 0 W/5754949-5754949 FN3471-S SNP A -> T AC=1;AN=184;BQB=0.999598;DP=3112;DP4=1484,1411,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83085e-08;MQSB=0.883176;RPB=0.954948;SGB=42.7914;VDB=0.668109;EFF=INTERGENIC(MODIFIER||||||||||1) FN1751-S.SNP.11:5757675 chr11:005757675 0 W/5757675-5757675 FN1751-S SNP A -> G AC=1;AN=188;BQB=0.0562979;DP=3812;DP4=2138,1639,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.04799e-06;MQSB=0.941539;RPB=0.682596;SGB=-79.0704;VDB=0.832486;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V207|380|LOC_Os11g10520|protein_coding|CODING|LOC_Os11g10520.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V173|346|LOC_Os11g10520|protein_coding|CODING|LOC_Os11g10520.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V207|303|LOC_Os11g10520|protein_coding|CODING|LOC_Os11g10520.3|5|1) FN1423-S.SNP.11:5765098 chr11:005765098 0 W/5765098-5765098 FN1423-S Single Base Substitution C-G INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2334.SNP.11:5782664 chr11:005782664 0 W/5782664-5782664 FN2334 SNP T -> C AC=1;AN=192;BQB=0.636948;DP=4945;DP4=2289,2336,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.04e-11;MQSB=0.919683;RPB=0.478978;SGB=10.4835;VDB=0.0622321;EFF=INTRON(MODIFIER||||1307|LOC_Os11g10550|protein_coding|CODING|LOC_Os11g10550.1|2|1) FN3562-S.SNP.11:5790864 chr11:005790864 0 W/5790864-5790864 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.932348;DP=3403;DP4=1376,1939,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.1691e-10;MQSB=0.873245;RPB=0.975701;SGB=80.782;VDB=0.584892;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.11:5794098 chr11:005794098 0 W/5794098-5794098 FN-131 Single Base Substitution A-C INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2292.SNP.11:5800714 chr11:005800714 0 W/5800714-5800714 FN2292 SNP A -> T AC=1;AN=192;BQB=0.478033;DP=5003;DP4=2581,2243,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00039976;MQB=7.7954e-07;MQSB=4.98457e-09;RPB=0.758945;SGB=72.0322;VDB=0.37372;EFF=INTRON(MODIFIER||||833|LOC_Os11g10570|protein_coding|CODING|LOC_Os11g10570.1|1|1) FN1682-S.SNP.11:5804643 chr11:005804643 0 W/5804643-5804643 FN1682-S SNP G -> T AC=1;AN=188;BQB=0.99894;DP=3368;DP4=1809,1512,18,13;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0567102;MQB=0.0686284;MQSB=1.16924e-06;RPB=0.985537;SGB=-6.85034;VDB=0.0602133;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G357*|791|LOC_Os11g10580|protein_coding|CODING|LOC_Os11g10580.1|1|1) FN2084-S.SNP.11:5813265 chr11:005813265 0 W/5813265-5813265 FN2084-S SNP G -> A AC=2;AN=168;BQB=0.938104;DP=2684;DP4=1366,1260,19,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.00051e-11;MQSB=0.892267;RPB=0.698581;SGB=-44.6276;VDB=0.169534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.11:5815079 chr11:005815079 0 W/5815079-5815079 FN1916 Single Base Substitution C-A HET SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN2401.SNP.11:5818354 chr11:005818354 0 W/5818354-5818354 FN2401 SNP C -> A AC=1;AN=200;BQB=0.995127;DP=4890;DP4=2378,2028,24,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07794e-17;MQSB=0.986486;RPB=0.459533;SGB=-124.018;VDB=0.0635814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.11:5821433 chr11:005821433 0 W/5821433-5821433 FN2275-S SNP G -> A AC=2;AN=190;BQB=0.985045;DP=4536;DP4=2189,2041,55,52;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=0;MQSB=0.846562;RPB=0.991924;SGB=476.168;VDB=0.840517;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C981|1155|LOC_Os11g10610|protein_coding|CODING|LOC_Os11g10610.1|3|1) FN740-S.SNP.11:5824630 chr11:005824630 0 W/5824630-5824630 FN740-S Single Base Substitution C-T INTRON HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN1203-S.SNP.11:5826316 chr11:005826316 0 W/5826316-5826316 FN1203-S Single Base Substitution C-G SYNONYMOUS_CODING HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN3815-S.SNP.11:5830298 chr11:005830298 0 W/5830298-5830298 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.869152;DP=3213;DP4=1554,1489,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79789e-05;MQSB=0.99827;RPB=0.622773;SGB=-2.10437;VDB=0.303542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.11:5832180 chr11:005832180 0 W/5832180-5832180 FN1458-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN2436.SNP.11:5832180 chr11:005832180 0 W/5832180-5832180 FN2436 SNP C -> T AC=2;AN=200;BQB=0.986947;DP=3294;DP4=1538,1508,23,16;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00121433;MQB=6.7246e-12;MQSB=0.106886;RPB=0.261141;SGB=173.999;VDB=0.684686;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D69|685|LOC_Os11g10630|protein_coding|CODING|LOC_Os11g10630.1|2|1) FN3869-S.SNP.11:5832180 chr11:005832180 0 W/5832180-5832180 FN3869-S SNP C -> T AC=2;AN=158;BQB=0.948818;DP=2109;DP4=959,1061,11,8;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=5.02741e-07;MQSB=0.886047;RPB=0.904969;SGB=54.2901;VDB=0.758879;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D69|685|LOC_Os11g10630|protein_coding|CODING|LOC_Os11g10630.1|2|1) FN389-S.SNP.11:5832180 chr11:005832180 0 W/5832180-5832180 FN389-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN774-S.SNP.11:5832180 chr11:005832180 0 W/5832180-5832180 FN774-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2441.SNP.11:5843012 chr11:005843012 0 W/5843012-5843012 FN2441 SNP G -> A AC=1;AN=200;BQB=0.772793;DP=4575;DP4=2478,1881,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75495e-17;MQSB=0.990242;RPB=0.911997;SGB=123.342;VDB=0.749836;EFF=INTERGENIC(MODIFIER||||||||||1) FN-5.SNP.11:5844442 chr11:005844442 0 W/5844442-5844442 FN-5 Single Base Substitution A-T INTERGENIC Homo SNo: 5, Mutant_ID: FN-5, Generation: M2, Mutations: 33, Genes: 77, Seed availability: Yes. FN4020-S.SNP.11:5847093 chr11:005847093 0 W/5847093-5847093 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.431124;DP=2569;DP4=1242,1209,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.82472e-08;MQSB=0.994196;RPB=0.903633;SGB=45.0404;VDB=0.42633;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.11:5848251 chr11:005848251 0 W/5848251-5848251 FN836-S Single Base Substitution C-T INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3395-S.SNP.11:5848982 chr11:005848982 0 W/5848982-5848982 FN3395-S SNP G -> T AC=1;AN=184;BQB=0.924063;DP=3255;DP4=1869,1287,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.63847e-09;MQSB=0.995466;RPB=0.388452;SGB=20.7533;VDB=0.126489;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.11:5851509 chr11:005851509 0 W/5851509-5851509 FN2408 SNP T -> G AC=1;AN=200;BQB=0.658735;DP=5011;DP4=2313,2365,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38633e-13;MQSB=0.950522;RPB=0.40429;SGB=27.1468;VDB=0.793764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1420-S.SNP.11:5852277 chr11:005852277 0 W/5852277-5852277 FN1420-S Single Base Substitution T-A INTRON HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3607-S.SNP.11:5853090 chr11:005853090 0 W/5853090-5853090 FN3607-S SNP G -> A AC=1;AN=188;BQB=0.944855;DP=2839;DP4=1268,1432,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.86217e-09;MQSB=0.868075;RPB=0.334462;SGB=36.1006;VDB=0.232569;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S143|306|LOC_Os11g10670|protein_coding|CODING|LOC_Os11g10670.1|3|1) FN-156.SNP.11:5858288 chr11:005858288 0 W/5858288-5858288 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN1075-S.SNP.11:5869009 chr11:005869009 0 W/5869009-5869009 FN1075-S Single Base Substitution G-A INTERGENIC HOMO SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN-380.SNP.11:5869680 chr11:005869680 0 W/5869680-5869680 FN-380 Single Base Substitution G-T INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN690-S.SNP.11:5875030 chr11:005875030 0 W/5875030-5875030 FN690-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1027-S.SNP.11:5880468 chr11:005880468 0 W/5880468-5880468 FN1027-S Single Base Substitution G-T INTRON HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN1027-S.SNP.11:5880469 chr11:005880469 0 W/5880469-5880469 FN1027-S Single Base Substitution C-T INTRON HOMO SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2342.SNP.11:5888731 chr11:005888731 0 W/5888731-5888731 FN2342 SNP G -> T AC=1;AN=192;BQB=0.905258;DP=5001;DP4=2388,2327,4,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.43426e-09;MQSB=0.975851;RPB=0.0919068;SGB=23.7852;VDB=0.390867;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.11:5908603 chr11:005908603 0 W/5908603-5908603 FN3449-S SNP C -> T AC=1;AN=184;BQB=0.973436;DP=2577;DP4=1267,1220,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.16027e-10;MQSB=0.992022;RPB=0.888039;SGB=53.3568;VDB=0.554093;EFF=INTRON(MODIFIER||||895|LOC_Os11g10760|protein_coding|CODING|LOC_Os11g10760.1|1|1) W278-3-1.SNP.11:5914429 chr11:005914429 0 W/5914429-5914429 W278-3-1 Single Base Substitution C-T INTRON HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1000-S.SNP.11:5922143 chr11:005922143 0 W/5922143-5922143 FN1000-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-381.SNP.11:5922840 chr11:005922840 0 W/5922840-5922840 FN-381 Single Base Substitution T-A INTRON HOMO SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2494.SNP.11:5924829 chr11:005924829 0 W/5924829-5924829 FN2494 SNP C -> G AC=1;AN=200;BQB=0.563969;DP=5231;DP4=2389,2564,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.97089e-18;MQSB=0.99281;RPB=0.259429;SGB=-5.84819;VDB=0.610676;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.11:5928239 chr11:005928239 0 W/5928239-5928239 FN2665-S SNP G -> C AC=1;AN=200;BQB=0.920706;DP=4668;DP4=2263,2096,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.34163e-07;MQSB=0.995776;RPB=0.847814;SGB=49.6594;VDB=0.135627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2706-S.SNP.11:5937372 chr11:005937372 0 W/5937372-5937372 FN2706-S SNP A -> G AC=2;AN=200;BQB=0.00495052;DP=3495;DP4=1827,1238,13,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.40854e-11;MQSB=0.734186;RPB=0.756521;SGB=-178.849;VDB=0.556529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1190-S.SNP.11:5941325 chr11:005941325 0 W/5941325-5941325 FN1190-S Single Base Substitution G-A INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2153-S.SNP.11:5942146 chr11:005942146 0 W/5942146-5942146 FN2153-S SNP T -> C AC=1;AN=168;BQB=0.32583;DP=3857;DP4=1540,2273,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.59775e-13;MQSB=0.984468;RPB=0.425957;SGB=-12.7876;VDB=0.187935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.11:5953536 chr11:005953536 0 W/5953536-5953536 FN2709-S SNP G -> A AC=1;AN=200;BQB=0.402674;DP=5079;DP4=2456,2379,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.56051e-07;MQSB=0.982799;RPB=0.996529;SGB=40.4492;VDB=0.392568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.11:5954613 chr11:005954613 0 W/5954613-5954613 FN1412-S Single Base Substitution G-A INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3462-S.SNP.11:5958420 chr11:005958420 0 W/5958420-5958420 FN3462-S SNP A -> G AC=2;AN=184;BQB=0.971108;DP=2581;DP4=1278,1174,12,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.28666e-09;MQSB=0.856789;RPB=0.959443;SGB=30.8405;VDB=0.77601;EFF=INTERGENIC(MODIFIER||||||||||1) FN1633-S.SNP.11:5959404 chr11:005959404 0 W/5959404-5959404 FN1633-S Single Base Substitution C-T INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2387.SNP.11:5964650 chr11:005964650 0 W/5964650-5964650 FN2387 SNP C -> G AC=1;AN=192;BQB=0.139564;DP=4665;DP4=2366,2089,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.01217e-05;MQSB=0.969953;RPB=0.25348;SGB=23.7852;VDB=0.527611;EFF=INTRON(MODIFIER||||1929|LOC_Os11g10820|protein_coding|CODING|LOC_Os11g10820.1|3|1) FN1011-S.SNP.11:5964888 chr11:005964888 0 W/5964888-5964888 FN1011-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g10820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1299-S.SNP.11:5967786 chr11:005967786 0 W/5967786-5967786 FN1299-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1264-S.SNP.11:5969174 chr11:005969174 0 W/5969174-5969174 FN1264-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g10820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN1506-S.SNP.11:5969174 chr11:005969174 0 W/5969174-5969174 FN1506-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g10820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1682-S.SNP.11:5991981 chr11:005991981 0 W/5991981-5991981 FN1682-S SNP C -> T AC=1;AN=188;BQB=0.0585341;DP=3745;DP4=1690,2006,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00423e-09;MQSB=0.935973;RPB=0.641745;SGB=-72.0994;VDB=0.606847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.11:5992708 chr11:005992708 0 W/5992708-5992708 FN2779-S SNP C -> A AC=1;AN=198;BQB=0.572049;DP=3950;DP4=1857,1822,9,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50915e-16;MQSB=0.602326;RPB=0.189112;SGB=113.881;VDB=0.418295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.11:5998009 chr11:005998009 0 W/5998009-5998009 FN1614-S Single Base Substitution T-C INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1108-S.SNP.11:6002826 chr11:006002826 0 W/6002826-6002826 FN1108-S Single Base Substitution A-C INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN1546-S.SNP.11:6003209 chr11:006003209 0 W/6003209-6003209 FN1546-S Single Base Substitution G-T INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN1546-S.SNP.11:6003239 chr11:006003239 0 W/6003239-6003239 FN1546-S Single Base Substitution G-A INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN343-S.SNP.11:6004579 chr11:006004579 0 W/6004579-6004579 FN343-S Single Base Substitution G-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3419-S.SNP.11:6005837 chr11:006005837 0 W/6005837-6005837 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.72693;DP=2736;DP4=1078,1480,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00250694;MQSB=0.999995;RPB=0.842604;SGB=18.1394;VDB=0.598931;EFF=INTERGENIC(MODIFIER||||||||||1) FN441-S.SNP.11:6005837 chr11:006005837 0 W/6005837-6005837 FN441-S Single Base Substitution G-A INTERGENIC HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. W706-3-1.SNP.11:6006452 chr11:006006452 0 W/6006452-6006452 W706-3-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN480-S.SNP.11:6010757 chr11:006010757 0 W/6010757-6010757 FN480-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3110-S.SNP.11:6013018 chr11:006013018 0 W/6013018-6013018 FN3110-S SNP C -> T AC=1;AN=184;BQB=0.95623;DP=4539;DP4=1776,2611,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0319454;MQB=0.990906;MQSB=3.36774e-06;RPB=0.908161;SGB=74.4875;VDB=0.0496731;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T666I|1777|LOC_Os11g10900|protein_coding|CODING|LOC_Os11g10900.1|3|1) FN-407.SNP.11:6022025 chr11:006022025 0 W/6022025-6022025 FN-407 Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.11:6022025 chr11:006022025 0 W/6022025-6022025 FN407-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1117-S.SNP.11:6031607 chr11:006031607 0 W/6031607-6031607 FN1117-S Single Base Substitution A-C INTRON HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN618-S.SNP.11:6031629 chr11:006031629 0 W/6031629-6031629 FN618-S Single Base Substitution T-C INTRON HOMO SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3853-S.SNP.11:6039644 chr11:006039644 0 W/6039644-6039644 FN3853-S SNP T -> A AC=1;AN=158;BQB=0.819579;DP=2198;DP4=1197,792,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.95052e-08;MQSB=0.425422;RPB=0.636521;SGB=28.5576;VDB=0.0391228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I110N|134|LOC_Os11g10940|protein_coding|CODING|LOC_Os11g10940.1|2|1) FN1330-S.SNP.11:6040511 chr11:006040511 0 W/6040511-6040511 FN1330-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN-166.SNP.11:6043787 chr11:006043787 0 W/6043787-6043787 FN-166 Single Base Substitution G-A INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-220.SNP.11:6046287 chr11:006046287 0 W/6046287-6046287 FN-220 Single Base Substitution G-A INTERGENIC HOMO SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2158-S.SNP.11:6054772 chr11:006054772 0 W/6054772-6054772 FN2158-S SNP C -> T AC=1;AN=168;BQB=0.0033326;DP=3894;DP4=1496,2349,11,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000256805;MQB=2.46657e-09;MQSB=0.197707;RPB=0.74678;SGB=-113.477;VDB=0.0811701;EFF=INTRON(MODIFIER||||1099|LOC_Os11g10970|protein_coding|CODING|LOC_Os11g10970.1|1|1) FN2756-S.SNP.11:6072187 chr11:006072187 0 W/6072187-6072187 FN2756-S SNP T -> C AC=1;AN=200;BQB=0.70458;DP=4991;DP4=2395,2363,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000200361;MQB=4.17953e-09;MQSB=0.914122;RPB=0.532981;SGB=58.8698;VDB=0.402361;EFF=INTRON(MODIFIER||||675|LOC_Os11g11000|protein_coding|CODING|LOC_Os11g11000.1|3|1),INTRON(MODIFIER||||675|LOC_Os11g11000|protein_coding|CODING|LOC_Os11g11000.2|3|1),INTRON(MODIFIER||||542|LOC_Os11g11000|protein_coding|CODING|LOC_Os11g11000.3|3|1) FN478-S.SNP.11:6077923 chr11:006077923 0 W/6077923-6077923 FN478-S Single Base Substitution A-G INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN2487.SNP.11:6081515 chr11:006081515 0 W/6081515-6081515 FN2487 SNP A -> T AC=1;AN=200;BQB=0.609268;DP=4696;DP4=2534,1876,15,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.47521e-16;MQSB=0.849878;RPB=0.0601008;SGB=90.7419;VDB=0.572956;EFF=INTERGENIC(MODIFIER||||||||||1) FN451-S.SNP.11:6083727 chr11:006083727 0 W/6083727-6083727 FN451-S Single Base Substitution G-A INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN462-S.SNP.11:6090613 chr11:006090613 0 W/6090613-6090613 FN462-S Single Base Substitution T-A INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1282-S.SNP.11:6094394 chr11:006094394 0 W/6094394-6094394 FN1282-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2438.SNP.11:6094778 chr11:006094778 0 W/6094778-6094778 FN2438 SNP G -> A AC=1;AN=200;BQB=0.917205;DP=3812;DP4=1866,1583,7,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000262329;MQB=3.51186e-05;MQSB=0.0787777;RPB=0.991786;SGB=36.6644;VDB=0.699825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.11:6097175 chr11:006097175 0 W/6097175-6097175 FN3517-S SNP G -> A AC=2;AN=188;BQB=0.94614;DP=2617;DP4=1336,1176,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.79349e-15;MQSB=0.896411;RPB=0.963579;SGB=103.498;VDB=0.329096;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.11:6100663 chr11:006100663 0 W/6100663-6100663 FN4279-S SNP A -> G AC=1;AN=170;BQB=0.875092;DP=2378;DP4=1035,1183,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.88311e-06;MQSB=0.975851;RPB=0.441581;SGB=7.67082;VDB=0.763665;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.11:6106691 chr11:006106691 0 W/6106691-6106691 FN1519-S Single Base Substitution T-G INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3383-S.SNP.11:6113157 chr11:006113157 0 W/6113157-6113157 FN3383-S SNP G -> A AC=2;AN=184;BQB=0.822125;DP=2976;DP4=1032,1834,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.08439e-14;MQSB=0.984323;RPB=0.913073;SGB=26.5856;VDB=0.898788;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P343|353|LOC_Os11g11060|protein_coding|CODING|LOC_Os11g11060.1|6|1) FN598-S.SNP.11:6132354 chr11:006132354 0 W/6132354-6132354 FN598-S Single Base Substitution G-A INTERGENIC HOMO SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2397.SNP.11:6159018 chr11:006159018 0 W/6159018-6159018 FN2397 SNP C -> G AC=2;AN=200;BQB=0.845637;DP=3429;DP4=1845,1354,13,11;HOB=0.0198;ICB=0.495051;MQ=27;MQ0F=0.00174978;MQB=0.00544678;MQSB=0.0976855;RPB=0.988476;SGB=104.921;VDB=0.966269;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.11:6159091 chr11:006159091 0 W/6159091-6159091 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN389-S.SNP.11:6159728 chr11:006159728 0 W/6159728-6159728 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2751-S.SNP.11:6160057 chr11:006160057 0 W/6160057-6160057 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.99783;DP=2821;DP4=1883,835,11,5;HOB=0.0198;ICB=0.495051;MQ=29;MQ0F=0.109536;MQB=0.999545;MQSB=0.0259847;RPB=0.654453;SGB=68.0801;VDB=0.515357;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.11:6160944 chr11:006160944 0 W/6160944-6160944 FN514-S Single Base Substitution G-T INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3407-S.SNP.11:6162937 chr11:006162937 0 W/6162937-6162937 FN3407-S SNP A -> T AC=1;AN=184;BQB=0.860773;DP=3354;DP4=1632,1521,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00178891;MQB=0.0136186;MQSB=0.000312208;RPB=0.452548;SGB=5.28054;VDB=0.0849445;EFF=INTRON(MODIFIER||||476|LOC_Os11g11140|protein_coding|CODING|LOC_Os11g11140.1|1|1) FN1422-S.SNP.11:6162982 chr11:006162982 0 W/6162982-6162982 FN1422-S Single Base Substitution C-T INTRON HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN3912-S.SNP.11:6173333 chr11:006173333 0 W/6173333-6173333 FN3912-S SNP G -> A AC=1;AN=158;BQB=0.947431;DP=2232;DP4=1095,1084,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.30998e-06;MQSB=0.120389;RPB=0.504397;SGB=27.3346;VDB=0.972263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P159L|495|LOC_Os11g11160|protein_coding|CODING|LOC_Os11g11160.1|3|1) FN2377.SNP.11:6176662 chr11:006176662 0 W/6176662-6176662 FN2377 SNP T -> A AC=1;AN=192;BQB=0.986642;DP=9924;DP4=4334,4990,22,25;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0470576;MQB=0.00247757;MQSB=7.1086e-10;RPB=0.199701;SGB=2.72612;VDB=0.203284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Tgt|S1519C|1529|LOC_Os11g11170|protein_coding|CODING|LOC_Os11g11170.1|8|1) FN3942-S.SNP.11:6177632 chr11:006177632 0 W/6177632-6177632 FN3942-S SNP T -> A AC=1;AN=168;BQB=0.872399;DP=4548;DP4=2486,1911,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.189754;MQB=0.836687;MQSB=0;RPB=0.784603;SGB=55.3328;VDB=0.373104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R1256S|1529|LOC_Os11g11170|protein_coding|CODING|LOC_Os11g11170.1|7|1) FN2704-S.SNP.11:6182169 chr11:006182169 0 W/6182169-6182169 FN2704-S SNP A -> G AC=1;AN=200;BQB=0.486273;DP=9013;DP4=4090,4418,30,19;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.022634;MQB=5.78641e-05;MQSB=4.89615e-10;RPB=0.321292;SGB=112.85;VDB=0.527232;EFF=INTRON(MODIFIER||||1529|LOC_Os11g11170|protein_coding|CODING|LOC_Os11g11170.1|2|1) FN3390-S.SNP.11:6185853 chr11:006185853 0 W/6185853-6185853 FN3390-S SNP C -> T AC=1;AN=184;BQB=0.575737;DP=3391;DP4=1382,1849,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.20956e-05;MQSB=0.531099;RPB=0.820897;SGB=-0.806606;VDB=0.0607873;EFF=INTERGENIC(MODIFIER||||||||||1) FN909-S.SNP.11:6187970 chr11:006187970 0 W/6187970-6187970 FN909-S Single Base Substitution G-A INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2470.SNP.11:6189791 chr11:006189791 0 W/6189791-6189791 FN2470 SNP G -> A AC=1;AN=200;BQB=0.946015;DP=4822;DP4=2537,2042,22,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06691e-15;MQSB=0.936244;RPB=0.923074;SGB=137.158;VDB=0.164158;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.11:6190999 chr11:006190999 0 W/6190999-6190999 FN4202-S SNP C -> A AC=1;AN=170;BQB=0.940921;DP=2434;DP4=1182,1164,10,14;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=4.67301e-14;MQSB=0.00225203;RPB=0.677366;SGB=101.184;VDB=0.118267;EFF=INTRON(MODIFIER||||267|LOC_Os11g11180|protein_coding|CODING|LOC_Os11g11180.1|2|1) FN2245-S.SNP.11:6196289 chr11:006196289 0 W/6196289-6196289 FN2245-S SNP C -> T AC=2;AN=190;BQB=0.283496;DP=3543;DP4=1956,1398,7,6;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.000282247;MQB=4.61306e-08;MQSB=0.632857;RPB=0.843145;SGB=36.1006;VDB=0.399768;EFF=INTRON(MODIFIER||||112|LOC_Os11g11200|protein_coding|CODING|LOC_Os11g11200.1|3|1) FN2200-S.SNP.11:6201322 chr11:006201322 0 W/6201322-6201322 FN2200-S SNP G -> T AC=1;AN=190;BQB=0.912798;DP=5060;DP4=2354,2336,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.03786e-11;MQSB=0.983811;RPB=0.295004;SGB=-39.8934;VDB=0.5688;EFF=UTR_3_PRIME(MODIFIER||33||280|LOC_Os11g11210|protein_coding|CODING|LOC_Os11g11210.1|7|1) FN2701-S.SNP.11:6208583 chr11:006208583 0 W/6208583-6208583 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.825786;DP=4821;DP4=2237,2360,15,12;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0412777;MQB=1.77971e-06;MQSB=7.62486e-09;RPB=0.970503;SGB=-7.6637;VDB=0.342768;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A526E|677|LOC_Os11g11220|protein_coding|CODING|LOC_Os11g11220.1|5|1) FN2701-S.SNP.11:6208584 chr11:006208584 0 W/6208584-6208584 FN2701-S SNP C -> T AC=1;AN=200;BQB=0.768611;DP=4815;DP4=2271,2286,13,12;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0413292;MQB=3.83404e-06;MQSB=2.82814e-10;RPB=0.747876;SGB=79.9264;VDB=0.0599031;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A526T|677|LOC_Os11g11220|protein_coding|CODING|LOC_Os11g11220.1|5|1) FN3787-S.SNP.11:6212250 chr11:006212250 0 W/6212250-6212250 FN3787-S SNP C -> T AC=1;AN=190;BQB=0.998389;DP=2765;DP4=1294,1376,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=0.000244335;MQSB=0.398567;RPB=0.714201;SGB=32.5467;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.11:6222763 chr11:006222763 0 W/6222763-6222763 FN3861-S SNP C -> T AC=2;AN=158;BQB=0.959477;DP=2432;DP4=990,1319,13,12;HOB=0.024996;ICB=0.493752;MQ=45;MQ0F=0.000411184;MQB=6.88652e-11;MQSB=0.000137517;RPB=0.213686;SGB=74.5068;VDB=0.165439;EFF=INTRON(MODIFIER||||355|LOC_Os11g11240|protein_coding|CODING|LOC_Os11g11240.1|3|1) FN-115.SNP.11:6226827 chr11:006226827 0 W/6226827-6226827 FN-115 Single Base Substitution A-T INTERGENIC HET SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN3677-S.SNP.11:6231436 chr11:006231436 0 W/6231436-6231436 FN3677-S SNP C -> A AC=1;AN=190;BQB=0.988761;DP=2758;DP4=1315,1352,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.39648e-10;MQSB=0.999998;RPB=0.991423;SGB=-35.4322;VDB=0.917149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.11:6236128 chr11:006236128 0 W/6236128-6236128 FN2456 SNP C -> A AC=1;AN=200;BQB=0.9999;DP=4280;DP4=1674,2291,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.2823e-07;MQSB=0.999832;RPB=0.999976;SGB=36.6644;VDB=0.281535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.11:6236790 chr11:006236790 0 W/6236790-6236790 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.476215;DP=2416;DP4=1844,509,18,0;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.95494e-07;MQSB=0.983385;RPB=0.996078;SGB=-13.9132;VDB=0.0981637;EFF=INTERGENIC(MODIFIER||||||||||1) FN3677-S.SNP.11:6237471 chr11:006237471 0 W/6237471-6237471 FN3677-S SNP C -> A AC=1;AN=190;BQB=0.888322;DP=2439;DP4=1051,1314,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47848e-06;MQSB=0.994493;RPB=0.459818;SGB=53.6492;VDB=0.181842;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.11:6243049 chr11:006243049 0 W/6243049-6243049 FN1557-S Single Base Substitution T-C INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-121.SNP.11:6248706 chr11:006248706 0 W/6248706-6248706 FN-121 Single Base Substitution C-A INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-121.SNP.11:6248736 chr11:006248736 0 W/6248736-6248736 FN-121 Single Base Substitution G-A INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN1278-S.SNP.11:6250398 chr11:006250398 0 W/6250398-6250398 FN1278-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g11290 retrotransposon protein, putative, unclassified, expressed SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN769-S.SNP.11:6251849 chr11:006251849 0 W/6251849-6251849 FN769-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g11290 retrotransposon protein, putative, unclassified, expressed SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2540-S.SNP.11:6252719 chr11:006252719 0 W/6252719-6252719 FN2540-S SNP C -> T AC=2;AN=198;BQB=0.969338;DP=4057;DP4=1818,1988,24,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.8286e-19;MQSB=0.452174;RPB=0.591132;SGB=89.0321;VDB=0.409572;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L920|1658|LOC_Os11g11290|protein_coding|CODING|LOC_Os11g11290.1|3|1) FN2476.SNP.11:6256770 chr11:006256770 0 W/6256770-6256770 FN2476 SNP C -> A AC=1;AN=200;BQB=0.873516;DP=4399;DP4=2132,1845,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3295e-11;MQSB=0.897971;RPB=0.812719;SGB=45.1159;VDB=0.174163;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.11:6257434 chr11:006257434 0 W/6257434-6257434 FN3390-S SNP G -> A AC=1;AN=184;BQB=0.92717;DP=3481;DP4=1853,1501,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.46612e-10;MQSB=0.995614;RPB=0.0812104;SGB=30.8405;VDB=0.706792;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.11:6277561 chr11:006277561 0 W/6277561-6277561 FN764-S Single Base Substitution C-T INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN-102.SNP.11:6278574 chr11:006278574 0 W/6278574-6278574 FN-102 Single Base Substitution C-G INTERGENIC HET SNo: 102, Mutant_ID: FN-102, Generation: M2, Mutations: 97, Genes: 13, Seed availability: Yes. FN1486-S.SNP.11:6279208 chr11:006279208 0 W/6279208-6279208 FN1486-S Single Base Substitution G-A INTERGENIC HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN391-S.SNP.11:6289819 chr11:006289819 0 W/6289819-6289819 FN391-S Single Base Substitution A-C INTRON HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN1323-S.SNP.11:6295651 chr11:006295651 0 W/6295651-6295651 FN1323-S Single Base Substitution C-T INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1554-S.SNP.11:6295651 chr11:006295651 0 W/6295651-6295651 FN1554-S Single Base Substitution C-T INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1722-S.SNP.11:6295651 chr11:006295651 0 W/6295651-6295651 FN1722-S SNP C -> T AC=1;AN=188;BQB=0.00196613;DP=3189;DP4=1766,1351,14,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42235e-06;MQSB=0.999877;RPB=0.918568;SGB=-262.073;VDB=0.888113;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.11:6299847 chr11:006299847 0 W/6299847-6299847 FN4258-S SNP T -> C AC=1;AN=170;BQB=0.997017;DP=2728;DP4=1759,880,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.61502e-06;MQSB=0.850946;RPB=0.829293;SGB=34.5445;VDB=0.275286;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P343|843|LOC_Os11g11350|protein_coding|CODING|LOC_Os11g11350.1|1|1) FN2279-S.SNP.11:6303871 chr11:006303871 0 W/6303871-6303871 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.322771;DP=4467;DP4=2021,2080,15,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000223864;MQB=3.72826e-13;MQSB=0.213662;RPB=0.998629;SGB=78.7471;VDB=0.493826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.11:6303872 chr11:006303872 0 W/6303872-6303872 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.409644;DP=4464;DP4=2008,2029,16,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13705e-12;MQSB=0.341599;RPB=0.9719;SGB=51.7524;VDB=0.795323;EFF=INTERGENIC(MODIFIER||||||||||1) FN740-S.SNP.11:6312480 chr11:006312480 0 W/6312480-6312480 FN740-S Single Base Substitution A-G INTERGENIC HOMO SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3468-S.SNP.11:6333351 chr11:006333351 0 W/6333351-6333351 FN3468-S SNP A -> T AC=1;AN=184;BQB=0.86072;DP=2101;DP4=795,1248,1,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000475964;MQB=4.52083e-08;MQSB=0.975161;RPB=0.509096;SGB=48.7425;VDB=0.148495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.11:6333496 chr11:006333496 0 W/6333496-6333496 FN1465-S Single Base Substitution A-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1322-S.SNP.11:6353552 chr11:006353552 0 W/6353552-6353552 FN1322-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN_815-4-1.SNP.11:6369860 chr11:006369860 0 W/6369860-6369860 FN_815-4-1 Single Base Substitution G-T HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN378-S.SNP.11:6371069 chr11:006371069 0 W/6371069-6371069 FN378-S Single Base Substitution G-T INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN775-S.SNP.11:6372712 chr11:006372712 0 W/6372712-6372712 FN775-S Single Base Substitution T-C INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3751-S.SNP.11:6373608 chr11:006373608 0 W/6373608-6373608 FN3751-S SNP C -> T AC=1;AN=190;BQB=0.908859;DP=2817;DP4=1230,1426,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.98342e-08;MQSB=0.989437;RPB=0.952627;SGB=49.0954;VDB=0.470998;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.11:6380759 chr11:006380759 0 W/6380759-6380759 FN985-S Single Base Substitution A-T INTERGENIC HOMO SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN3916-S.SNP.11:6389658 chr11:006389658 0 W/6389658-6389658 FN3916-S SNP A -> C AC=1;AN=158;BQB=0.973902;DP=2384;DP4=1072,1248,5,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.8229e-11;MQSB=0.988882;RPB=0.917546;SGB=68.9144;VDB=0.780368;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.11:6393122 chr11:006393122 0 W/6393122-6393122 FN3468-S SNP C -> A AC=1;AN=184;BQB=0.99998;DP=2606;DP4=1251,1285,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36264e-10;MQSB=0.985296;RPB=0.620452;SGB=75.8731;VDB=0.881934;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A381|439|LOC_Os11g11500|protein_coding|CODING|LOC_Os11g11500.1|2|1) FN-301.SNP.11:6400365 chr11:006400365 0 W/6400365-6400365 FN-301 Single Base Substitution G-C INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3310-S.SNP.11:6401095 chr11:006401095 0 W/6401095-6401095 FN3310-S SNP C -> A AC=1;AN=184;BQB=0.783131;DP=3232;DP4=1347,1769,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.19507e-07;MQSB=0.975653;RPB=0.738741;SGB=39.2697;VDB=0.00924065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1345-S.SNP.11:6413329 chr11:006413329 0 W/6413329-6413329 FN1345-S Single Base Substitution T-C INTERGENIC HET SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1333-S.SNP.11:6414617 chr11:006414617 0 W/6414617-6414617 FN1333-S Single Base Substitution T-C INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN4146-S.SNP.11:6417666 chr11:006417666 0 W/6417666-6417666 FN4146-S SNP G -> A AC=1;AN=170;BQB=0.854331;DP=2489;DP4=1304,1067,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.78441e-09;MQSB=0.956222;RPB=0.562887;SGB=61.2001;VDB=0.633655;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A32T|138|LOC_Os11g11540|protein_coding|CODING|LOC_Os11g11540.1|1|1) FN_827-1.SNP.11:6417780 chr11:006417780 0 W/6417780-6417780 FN_827-1 Single Base Substitution T-C Homo LOC_Os11g11540 LGC1, putative, expressed SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN774-S.SNP.11:6423857 chr11:006423857 0 W/6423857-6423857 FN774-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3452-S.SNP.11:6425947 chr11:006425947 0 W/6425947-6425947 FN3452-S SNP C -> G AC=1;AN=184;BQB=0.969557;DP=3324;DP4=1593,1604,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00049436;MQSB=0.866998;RPB=0.615814;SGB=18.1394;VDB=0.283405;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.11:6427084 chr11:006427084 0 W/6427084-6427084 FN714-S Single Base Substitution A-G INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN3319-S.SNP.11:6427772 chr11:006427772 0 W/6427772-6427772 FN3319-S SNP T -> C AC=2;AN=184;BQB=0.951606;DP=3106;DP4=1544,1328,18,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.06263e-16;MQSB=0.872564;RPB=0.853737;SGB=61.1019;VDB=0.915082;EFF=INTERGENIC(MODIFIER||||||||||1) W426-1-1.SNP.11:6431187 chr11:006431187 0 W/6431187-6431187 W426-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1582-S.SNP.11:6431256 chr11:006431256 0 W/6431256-6431256 FN1582-S Single Base Substitution A-G INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN849-S.SNP.11:6432397 chr11:006432397 0 W/6432397-6432397 FN849-S Single Base Substitution C-G INTERGENIC HET SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN3859-S.SNP.11:6432939 chr11:006432939 0 W/6432939-6432939 FN3859-S SNP C -> T AC=1;AN=158;BQB=0.547551;DP=2590;DP4=915,1579,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.0003861;MQB=0.0357324;MQSB=2.83152e-11;RPB=0.178848;SGB=17.2267;VDB=0.188618;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.11:6435154 chr11:006435154 0 W/6435154-6435154 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.979581;DP=4559;DP4=2075,2044,17,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.87381e-13;MQSB=0.864038;RPB=0.760193;SGB=-42.1241;VDB=0.00867125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I53L|84|LOC_Os11g11570|protein_coding|CODING|LOC_Os11g11570.1|1|1) FN4300-S.SNP.11:6438159 chr11:006438159 0 W/6438159-6438159 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.977418;DP=2583;DP4=1145,1381,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.11403e-05;MQSB=0.890103;RPB=0.978539;SGB=25.6601;VDB=0.510937;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.11:6441880 chr11:006441880 0 W/6441880-6441880 FN2684-S SNP C -> T AC=2;AN=200;BQB=0.811918;DP=4866;DP4=2267,2345,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.00647e-25;MQSB=0.963689;RPB=0.571971;SGB=152.03;VDB=0.874594;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H363Y|1437|LOC_Os11g11580|protein_coding|CODING|LOC_Os11g11580.1|2|1) FN1108-S.SNP.11:6449964 chr11:006449964 0 W/6449964-6449964 FN1108-S Single Base Substitution T-G INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2494.SNP.11:6455480 chr11:006455480 0 W/6455480-6455480 FN2494 SNP G -> A AC=1;AN=200;BQB=0.101345;DP=4180;DP4=1883,2036,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.57194e-06;MQSB=0.950556;RPB=0.654941;SGB=16.4591;VDB=0.632396;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C68|182|LOC_Os11g11610|protein_coding|CODING|LOC_Os11g11610.1|1|1) FN-127.SNP.11:6457686 chr11:006457686 0 W/6457686-6457686 FN-127 Single Base Substitution C-A INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2729-S.SNP.11:6458726 chr11:006458726 0 W/6458726-6458726 FN2729-S SNP T -> C AC=1;AN=200;BQB=0.652012;DP=4861;DP4=1934,2357,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56198e-12;MQSB=0.996482;RPB=0.775983;SGB=-73.6537;VDB=0.413536;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.11:6459691 chr11:006459691 0 W/6459691-6459691 FN811-S Single Base Substitution G-C INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4074-S.SNP.11:6467732 chr11:006467732 0 W/6467732-6467732 FN4074-S SNP C -> A AC=2;AN=182;BQB=0.998652;DP=2900;DP4=1306,1477,10,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.42458e-13;MQSB=0.934848;RPB=0.77418;SGB=98.2417;VDB=0.504172;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.11:6469086 chr11:006469086 0 W/6469086-6469086 FN2166-S SNP T -> A AC=2;AN=168;BQB=0.35571;DP=2650;DP4=1507,1083,30,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.67533e-18;MQSB=0.999755;RPB=0.958888;SGB=-5.89455;VDB=0.11715;EFF=INTERGENIC(MODIFIER||||||||||1) FN539-S.SNP.11:6474578 chr11:006474578 0 W/6474578-6474578 FN539-S Single Base Substitution T-C INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN2687-S.SNP.11:6477110 chr11:006477110 0 W/6477110-6477110 FN2687-S SNP A -> T AC=2;AN=200;BQB=0.813994;DP=3641;DP4=1823,1430,9,11;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.88444e-07;MQSB=2.89203e-12;RPB=0.950822;SGB=61.9006;VDB=0.140852;EFF=INTRON(MODIFIER||||844|LOC_Os11g11650|protein_coding|CODING|LOC_Os11g11650.1|1|1) FN3787-S.SNP.11:6481645 chr11:006481645 0 W/6481645-6481645 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.831303;DP=2567;DP4=1194,1279,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=4.73168e-07;MQSB=0.416961;RPB=0.527778;SGB=64.5316;VDB=0.678627;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G309D|438|LOC_Os11g11660|protein_coding|CODING|LOC_Os11g11660.1|1|1) FN4137-S.SNP.11:6483536 chr11:006483536 0 W/6483536-6483536 FN4137-S SNP A -> G AC=1;AN=170;BQB=0.996162;DP=2427;DP4=1083,1290,3,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.64842e-09;MQSB=0.895893;RPB=0.563721;SGB=38.3207;VDB=0.874637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.11:6486050 chr11:006486050 0 W/6486050-6486050 FN-206 Single Base Substitution A-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-206.SNP.11:6486051 chr11:006486051 0 W/6486051-6486051 FN-206 Single Base Substitution C-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN584-S.SNP.11:6487151 chr11:006487151 0 W/6487151-6487151 FN584-S Single Base Substitution G-A INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN750-S.SNP.11:6507392 chr11:006507392 0 W/6507392-6507392 FN750-S Single Base Substitution T-A INTERGENIC HOMO SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN973-S.SNP.11:6507392 chr11:006507392 0 W/6507392-6507392 FN973-S Single Base Substitution T-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3508-S.SNP.11:6510889 chr11:006510889 0 W/6510889-6510889 FN3508-S SNP G -> A AC=2;AN=188;BQB=0.996249;DP=2946;DP4=836,2051,6,18;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0;MQB=4.81435e-05;MQSB=0.0501716;RPB=0.790127;SGB=103.498;VDB=0.589781;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F91|295|LOC_Os11g11710|protein_coding|CODING|LOC_Os11g11710.1|1|1) FN-375.SNP.11:6512153 chr11:006512153 0 W/6512153-6512153 FN-375 Single Base Substitution C-G INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN2593-S.SNP.11:6517372 chr11:006517372 0 W/6517372-6517372 FN2593-S SNP C -> G AC=1;AN=198;BQB=0.899176;DP=3792;DP4=2060,1569,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=9.98495e-11;MQSB=0.276543;RPB=0.0733967;SGB=90.9049;VDB=0.0432443;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acG|T190|338|LOC_Os11g11720|protein_coding|CODING|LOC_Os11g11720.1|2|1) FN-133.SNP.11:6519534 chr11:006519534 0 W/6519534-6519534 FN-133 Single Base Substitution G-A INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN748-S.SNP.11:6523702 chr11:006523702 0 W/6523702-6523702 FN748-S Single Base Substitution A-T INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN3628-S.SNP.11:6524866 chr11:006524866 0 W/6524866-6524866 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.791765;DP=2664;DP4=1190,1364,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0;MQB=0.0019277;MQSB=0.280959;RPB=0.900525;SGB=46.7622;VDB=0.725062;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.11:6651378 chr11:006651378 0 W/6651378-6651378 FN4176-S SNP T -> A AC=2;AN=170;BQB=0.844024;DP=2409;DP4=1114,1119,11,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.93847e-13;MQSB=0.962148;RPB=0.762642;SGB=69.3045;VDB=0.556709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.11:6655684 chr11:006655684 0 W/6655684-6655684 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.905753;DP=4728;DP4=2379,2112,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.89205e-11;MQSB=0.691645;RPB=0.757706;SGB=81.8956;VDB=0.288922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1456-S.SNP.11:6724327 chr11:006724327 0 W/6724327-6724327 FN1456-S Single Base Substitution T-C INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN-121.SNP.11:6871988 chr11:006871988 0 W/6871988-6871988 FN-121 Single Base Substitution T-C INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-121.SNP.11:6871995 chr11:006871995 0 W/6871995-6871995 FN-121 Single Base Substitution T-C INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-189.SNP.11:6915677 chr11:006915677 0 W/6915677-6915677 FN-189 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN1650-S.SNP.11:6919815 chr11:006919815 0 W/6919815-6919815 FN1650-S Single Base Substitution G-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN3524-S.SNP.11:6946776 chr11:006946776 0 W/6946776-6946776 FN3524-S SNP T -> C AC=1;AN=188;BQB=0.985344;DP=2685;DP4=1106,1529,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.0643437;MQSB=0.540001;RPB=0.149288;SGB=44.4357;VDB=0.0662348;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G301|338|LOC_Os11g12430|protein_coding|CODING|LOC_Os11g12430.1|7|1) FN2637-S.SNP.11:6960635 chr11:006960635 0 W/6960635-6960635 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.866289;DP=4655;DP4=2201,2228,11,10;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=6.28618e-06;MQSB=0.9614;RPB=0.504172;SGB=39.9056;VDB=0.986586;EFF=INTERGENIC(MODIFIER||||||||||1) FN2493.SNP.11:6978405 chr11:006978405 0 W/6978405-6978405 FN2493 SNP C -> T AC=1;AN=200;BQB=0.823766;DP=4544;DP4=1749,2551,4,15;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=2.10695e-08;MQSB=8.32798e-11;RPB=0.437906;SGB=58.2954;VDB=0.618353;EFF=INTERGENIC(MODIFIER||||||||||1) FN-313.SNP.11:7008630 chr11:007008630 0 W/7008630-7008630 FN-313 Single Base Substitution T-C INTERGENIC HOMO SNo: 308, Mutant_ID: FN-313, Generation: M2, Mutations: 42, Genes: 114, Seed availability: Yes. FN1309-S.SNP.11:7013142 chr11:007013142 0 W/7013142-7013142 FN1309-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g12530 receptor-like protein kinase 5 precursor, putative, expressed SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN818-S.SNP.11:7019685 chr11:007019685 0 W/7019685-7019685 FN818-S Single Base Substitution G-C INTERGENIC HET SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN3474-S.SNP.11:7022497 chr11:007022497 0 W/7022497-7022497 FN3474-S SNP G -> A AC=1;AN=184;BQB=0.907778;DP=2868;DP4=1307,1479,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0156904;MQB=2.15802e-05;MQSB=3.01248e-05;RPB=0.89631;SGB=98.4821;VDB=0.5185;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.11:7029982 chr11:007029982 0 W/7029982-7029982 FN873-S Single Base Substitution C-T INTERGENIC HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2734-S.SNP.11:7036789 chr11:007036789 0 W/7036789-7036789 FN2734-S SNP A -> G AC=1;AN=200;BQB=0.780169;DP=4768;DP4=2811,1752,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.7795e-09;MQSB=0.999237;RPB=0.919274;SGB=21.6694;VDB=0.498124;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.11:7038261 chr11:007038261 0 W/7038261-7038261 FN2244-S SNP C -> G AC=2;AN=190;BQB=0.998931;DP=4658;DP4=2266,2071,13,20;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.000214684;MQB=7.75767e-05;MQSB=0.000348243;RPB=0.197156;SGB=69.6295;VDB=0.185878;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.11:7040988 chr11:007040988 0 W/7040988-7040988 FN2721-S SNP C -> T AC=1;AN=200;BQB=0.415892;DP=2889;DP4=750,1947,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.16511e-09;MQSB=0.273911;RPB=0.773616;SGB=58.8698;VDB=0.415823;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.11:7050277 chr11:007050277 0 W/7050277-7050277 FN2403 SNP G -> A AC=1;AN=200;BQB=0.987697;DP=3517;DP4=1976,1367,10,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=1.14463e-05;MQSB=0.587974;RPB=0.72928;SGB=63.4749;VDB=0.754234;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.11:7054253 chr11:007054253 0 W/7054253-7054253 FN496-S Single Base Substitution G-T INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN343-S.SNP.11:7056162 chr11:007056162 0 W/7056162-7056162 FN343-S Single Base Substitution T-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN343-S.SNP.11:7056163 chr11:007056163 0 W/7056163-7056163 FN343-S Single Base Substitution G-A INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN3937-S.SNP.11:7066250 chr11:007066250 0 W/7066250-7066250 FN3937-S SNP A -> T AC=1;AN=158;BQB=0.709381;DP=2443;DP4=1236,1130,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0;MQB=0.000321767;MQSB=0.239653;RPB=0.588708;SGB=38.3284;VDB=0.327896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I61L|113|LOC_Os11g12570|protein_coding|CODING|LOC_Os11g12570.1|2|1) FN1666-S.SNP.11:7066489 chr11:007066489 0 W/7066489-7066489 FN1666-S SNP T -> C AC=1;AN=188;BQB=0.360976;DP=3199;DP4=1418,1736,9,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.09795e-05;MQSB=0.946855;RPB=0.985895;SGB=-39.6481;VDB=0.111855;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.11:7070725 chr11:007070725 0 W/7070725-7070725 FN514-S Single Base Substitution T-C INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN244-S.SNP.11:7081471 chr11:007081471 0 W/7081471-7081471 FN244-S Single Base Substitution A-G INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2397.SNP.11:7087182 chr11:007087182 0 W/7087182-7087182 FN2397 SNP C -> A AC=2;AN=200;BQB=0.755979;DP=4560;DP4=2090,2211,17,24;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0;MQB=1.42413e-14;MQSB=0.850675;RPB=0.691643;SGB=92.009;VDB=0.890124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.11:7089067 chr11:007089067 0 W/7089067-7089067 FN3673-S SNP C -> T AC=2;AN=190;BQB=0.405752;DP=2521;DP4=1345,1098,10,13;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=5.26984e-15;MQSB=0.816838;RPB=0.999859;SGB=99.1879;VDB=0.350203;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.11:7089091 chr11:007089091 0 W/7089091-7089091 FN3673-S SNP C -> T AC=2;AN=190;BQB=0.97976;DP=2571;DP4=1298,1151,14,16;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0;MQB=1.30526e-18;MQSB=0.755995;RPB=0.677428;SGB=96.5165;VDB=0.82881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.11:7099028 chr11:007099028 0 W/7099028-7099028 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.99485;DP=1126;DP4=596,463,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0;MQB=0.425395;MQSB=0.0773481;RPB=0.245848;SGB=14.9842;VDB=0.00165115;EFF=INTERGENIC(MODIFIER||||||||||1) FN3353-S.SNP.11:7106183 chr11:007106183 0 W/7106183-7106183 FN3353-S SNP T -> C AC=1;AN=184;BQB=0.692526;DP=3201;DP4=1415,1583,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000312402;MQB=0.0011241;MQSB=8.03974e-07;RPB=0.990956;SGB=32.2261;VDB=0.997799;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Cac|Y617H|1061|LOC_Os11g12620|protein_coding|CODING|LOC_Os11g12620.1|1|1) FN2589-S.SNP.11:7109871 chr11:007109871 0 W/7109871-7109871 FN2589-S SNP A -> T AC=1;AN=198;BQB=0.749279;DP=3960;DP4=1859,1804,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=2.50734e-07;MQSB=1.46787e-06;RPB=0.993327;SGB=29.3637;VDB=0.848303;EFF=UTR_3_PRIME(MODIFIER||51||1061|LOC_Os11g12620|protein_coding|CODING|LOC_Os11g12620.1|2|1) FN2269-S.SNP.11:7120325 chr11:007120325 0 W/7120325-7120325 FN2269-S SNP G -> T AC=2;AN=190;BQB=0.498742;DP=4293;DP4=1921,2043,26,17;HOB=0.020831;ICB=0.494793;MQ=40;MQ0F=0;MQB=2.61926e-08;MQSB=0.833032;RPB=0.325097;SGB=142.717;VDB=0.0260442;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.11:7128379 chr11:007128379 0 W/7128379-7128379 FN2593-S SNP A -> T AC=1;AN=198;BQB=0.801673;DP=3197;DP4=1880,1139,10,10;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=4.97187e-07;MQSB=0.861097;RPB=0.518818;SGB=86.3098;VDB=0.679639;EFF=INTRON(MODIFIER||||715|LOC_Os11g12650|protein_coding|CODING|LOC_Os11g12650.1|1|1) FN540-S.SNP.11:7144247 chr11:007144247 0 W/7144247-7144247 FN540-S Single Base Substitution C-A INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN2080-S.SNP.11:7144791 chr11:007144791 0 W/7144791-7144791 FN2080-S SNP A -> G AC=1;AN=168;BQB=0.905456;DP=2093;DP4=1298,748,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=2.56041e-06;MQSB=0.626636;RPB=0.882416;SGB=31.908;VDB=0.439679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.11:7197352 chr11:007197352 0 W/7197352-7197352 FN1481-S Single Base Substitution G-A INTRON HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN-169.SNP.11:7201237 chr11:007201237 0 W/7201237-7201237 FN-169 Single Base Substitution T-G INTERGENIC HOMO SNo: 169, Mutant_ID: FN-169, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2272-S.SNP.11:7210058 chr11:007210058 0 W/7210058-7210058 FN2272-S SNP A -> C AC=1;AN=190;BQB=0.858023;DP=4898;DP4=2239,2420,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66744e-12;MQSB=0.934487;RPB=0.718846;SGB=75.1932;VDB=0.221688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.11:7212697 chr11:007212697 0 W/7212697-7212697 FN2678-S SNP T -> C AC=1;AN=200;BQB=0.0735443;DP=5319;DP4=2724,2325,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.04739e-11;MQSB=0.981866;RPB=0.963338;SGB=-62.495;VDB=0.281034;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.11:7218605 chr11:007218605 0 W/7218605-7218605 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN960-S.SNP.11:7224194 chr11:007224194 0 W/7224194-7224194 FN960-S Single Base Substitution G-T INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1319-S.SNP.11:7247933 chr11:007247933 0 W/7247933-7247933 FN1319-S Single Base Substitution T-A INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN1043-S.SNP.11:7249066 chr11:007249066 0 W/7249066-7249066 FN1043-S Single Base Substitution A-C INTERGENIC HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN3507-S.SNP.11:7258784 chr11:007258784 0 W/7258784-7258784 FN3507-S SNP G -> A AC=1;AN=188;BQB=0.993505;DP=4248;DP4=2408,1755,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000113181;MQSB=0.0681544;RPB=0.976234;SGB=48.979;VDB=0.51263;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L558|1105|LOC_Os11g12810|protein_coding|CODING|LOC_Os11g12810.1|5|1) FN2113-S.SNP.11:7264817 chr11:007264817 0 W/7264817-7264817 FN2113-S SNP A -> G AC=1;AN=168;BQB=0.28988;DP=3465;DP4=1954,1360,14,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=0.226229;MQSB=0.0482808;RPB=0.977966;SGB=-119.349;VDB=0.0548302;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.11:7274605 chr11:007274605 0 W/7274605-7274605 FN-371 Single Base Substitution C-T INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN4221-S.SNP.11:7288450 chr11:007288450 0 W/7288450-7288450 FN4221-S SNP C -> A AC=1;AN=170;BQB=0.999986;DP=2869;DP4=766,2047,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=27;MQ0F=0.167306;MQB=0.999372;MQSB=2.4599e-19;RPB=0.957792;SGB=52.3148;VDB=0.283476;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Acc|P191T|844|LOC_Os11g12850|protein_coding|CODING|LOC_Os11g12850.1|1|1) FN1034-S.SNP.11:7328639 chr11:007328639 0 W/7328639-7328639 FN1034-S Single Base Substitution A-C INTERGENIC HOMO SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN1295-S.SNP.11:7360924 chr11:007360924 0 W/7360924-7360924 FN1295-S Single Base Substitution T-C INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2779-S.SNP.11:7361926 chr11:007361926 0 W/7361926-7361926 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.703128;DP=4004;DP4=1898,1904,12,18;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.61551e-10;MQSB=0.032241;RPB=0.882056;SGB=132.261;VDB=0.994076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.11:7365467 chr11:007365467 0 W/7365467-7365467 FN1022-S Single Base Substitution A-T STOP_GAINED HET LOC_Os11g13440 RGH1A, putative, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN819-S.SNP.11:7374873 chr11:007374873 0 W/7374873-7374873 FN819-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2083-S.SNP.11:7382977 chr11:007382977 0 W/7382977-7382977 FN2083-S SNP C -> A AC=1;AN=168;BQB=0.951571;DP=1782;DP4=741,964,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.00252337;MQSB=0.771317;RPB=0.844288;SGB=10.0307;VDB=0.960168;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A136S|446|LOC_Os11g13480|protein_coding|CODING|LOC_Os11g13480.1|3|1) FN3396-S.SNP.11:7385017 chr11:007385017 0 W/7385017-7385017 FN3396-S SNP A -> G AC=1;AN=184;BQB=0.940722;DP=3054;DP4=1405,1512,11,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.15608e-10;MQSB=0.784367;RPB=0.757431;SGB=28.3187;VDB=0.777389;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.11:7387628 chr11:007387628 0 W/7387628-7387628 FN893-S Single Base Substitution C-T INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN1212-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1212-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1315-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1315-S Single Base Substitution G-T INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN1413-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1413-S Single Base Substitution G-T INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1430-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1430-S Single Base Substitution G-T INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1529-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1529-S Single Base Substitution G-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1619-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN1619-S Single Base Substitution G-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2194-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.114346;DP=4664;DP4=1932,2420,7,32;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.45136e-18;MQSB=0.998726;RPB=0.917992;SGB=-45.693;VDB=0.728974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN2445 SNP G -> T AC=2;AN=200;BQB=0.975679;DP=4351;DP4=1835,2261,12,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.49849e-17;MQSB=0.632429;RPB=0.460273;SGB=35.1726;VDB=0.250071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN3639-S SNP G -> T AC=2;AN=190;BQB=0.415094;DP=2472;DP4=935,1427,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35923e-10;MQSB=0.63881;RPB=0.996579;SGB=75.1932;VDB=0.265959;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN3792-S SNP G -> T AC=1;AN=190;BQB=0.320837;DP=2497;DP4=987,1421,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000672198;MQSB=0.412315;RPB=0.105716;SGB=21.8853;VDB=0.0169122;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN437-S Single Base Substitution G-T INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN673-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN673-S Single Base Substitution G-T INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN770-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN770-S Single Base Substitution G-T INTERGENIC HOMO SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN912-S.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN912-S Single Base Substitution G-T INTERGENIC HOMO SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_789-2-1.SNP.11:7391556 chr11:007391556 0 W/7391556-7391556 FN_789-2-1 Single Base Substitution G-T Homo SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN786-S.SNP.11:7392568 chr11:007392568 0 W/7392568-7392568 FN786-S Single Base Substitution C-T INTRON HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN2593-S.SNP.11:7409542 chr11:007409542 0 W/7409542-7409542 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.203082;DP=4054;DP4=1971,1912,7,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.90543e-08;MQSB=0.914197;RPB=0.982541;SGB=32.9588;VDB=0.311903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.11:7412217 chr11:007412217 0 W/7412217-7412217 FN1735-S SNP G -> A AC=1;AN=188;BQB=0.816438;DP=1743;DP4=428,1247,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.84833e-07;MQSB=0.850238;RPB=0.472056;SGB=28.8977;VDB=0.715037;EFF=INTRON(MODIFIER||||204|LOC_Os11g13520|protein_coding|CODING|LOC_Os11g13520.1|2|1) FN2687-S.SNP.11:7414075 chr11:007414075 0 W/7414075-7414075 FN2687-S SNP T -> C AC=1;AN=200;BQB=0.953358;DP=4755;DP4=2232,2338,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.102e-07;MQSB=0.326681;RPB=0.998344;SGB=33.0593;VDB=0.450939;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.11:7415736 chr11:007415736 0 W/7415736-7415736 FN4090-S SNP G -> T AC=1;AN=182;BQB=0.999236;DP=2433;DP4=1233,1144,1,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.40441e-05;MQSB=0.872421;RPB=0.958879;SGB=30.5793;VDB=0.905336;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.11:7415902 chr11:007415902 0 W/7415902-7415902 FN3743-S SNP C -> T AC=1;AN=190;BQB=0.125657;DP=2757;DP4=1337,1343,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.58978e-05;MQSB=0.83227;RPB=0.907247;SGB=62.7569;VDB=0.87221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.11:7418789 chr11:007418789 0 W/7418789-7418789 FN2428 SNP C -> G AC=2;AN=200;BQB=0.95955;DP=4782;DP4=2098,2337,19,24;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=1.03954e-13;MQSB=0.89878;RPB=0.823584;SGB=192.42;VDB=0.0217813;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.11:7420893 chr11:007420893 0 W/7420893-7420893 FN496-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2308.SNP.11:7428539 chr11:007428539 0 W/7428539-7428539 FN2308 SNP T -> A AC=2;AN=192;BQB=0.956075;DP=4728;DP4=2101,2065,18,10;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.3237e-17;MQSB=0.559112;RPB=0.755977;SGB=24.5626;VDB=0.731897;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M326L|404|LOC_Os11g13540|protein_coding|CODING|LOC_Os11g13540.1|2|1) FN3413-S.SNP.11:7430249 chr11:007430249 0 W/7430249-7430249 FN3413-S SNP G -> A AC=2;AN=184;BQB=0.974579;DP=2584;DP4=1370,1099,9,12;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.42148e-08;MQSB=0.375409;RPB=0.995459;SGB=63.9222;VDB=0.847483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.11:7438412 chr11:007438412 0 W/7438412-7438412 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.925927;DP=4830;DP4=2282,2188,22,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.19961e-18;MQSB=0.737733;RPB=0.469352;SGB=97.2193;VDB=0.193789;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E233|367|LOC_Os11g13570|protein_coding|CODING|LOC_Os11g13570.1|1|1) FN1272-S.SNP.11:7444305 chr11:007444305 0 W/7444305-7444305 FN1272-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN-349.SNP.11:7462537 chr11:007462537 0 W/7462537-7462537 FN-349 Single Base Substitution T-A INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-101.SNP.11:7467996 chr11:007467996 0 W/7467996-7467996 FN-101 Single Base Substitution A-C INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2221-S.SNP.11:7472760 chr11:007472760 0 W/7472760-7472760 FN2221-S SNP T -> C AC=2;AN=190;BQB=0.40495;DP=5174;DP4=2253,2154,38,20;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000193274;MQB=1.93316e-14;MQSB=0.291837;RPB=0.543255;SGB=-179.267;VDB=0.762886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3543-S.SNP.11:7477370 chr11:007477370 0 W/7477370-7477370 FN3543-S SNP G -> T AC=1;AN=188;BQB=0.969562;DP=2766;DP4=1469,1191,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000156168;MQSB=0.226023;RPB=0.54844;SGB=25.3545;VDB=0.273746;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.11:7480595 chr11:007480595 0 W/7480595-7480595 FN1723-S SNP G -> T AC=2;AN=188;BQB=0.0619755;DP=3490;DP4=1557,1777,27,25;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=2.66418e-07;MQSB=0.260074;RPB=0.815588;SGB=-165.055;VDB=0.79928;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.11:7485042 chr11:007485042 0 W/7485042-7485042 FN_831-4-1 Single Base Substitution C-T HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN485-S.SNP.11:7496264 chr11:007496264 0 W/7496264-7496264 FN485-S Single Base Substitution T-C INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN4202-S.SNP.11:7496515 chr11:007496515 0 W/7496515-7496515 FN4202-S SNP T -> C AC=1;AN=168;BQB=0.684805;DP=2256;DP4=988,1157,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=0.00572101;MQSB=0.548856;RPB=0.957461;SGB=34.5398;VDB=0.674053;EFF=INTERGENIC(MODIFIER||||||||||1) 702-8.SNP.11:7498664 chr11:007498664 0 W/7498664-7498664 702-8 Single Base Substitution A-G INTERGENIC Homo SNo: 1449, Mutant_ID: 702-8, Generation: M2, Mutations: 12, Genes: 9, Seed availability: Yes. FN1582-S.SNP.11:7500363 chr11:007500363 0 W/7500363-7500363 FN1582-S Single Base Substitution G-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1231-S.SNP.11:7512611 chr11:007512611 0 W/7512611-7512611 FN1231-S Single Base Substitution G-A INTRON HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN2122-S.SNP.11:7515183 chr11:007515183 0 W/7515183-7515183 FN2122-S SNP G -> A AC=2;AN=168;BQB=0.0722005;DP=3726;DP4=1849,1809,20,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.11159e-20;MQSB=0.999955;RPB=0.754528;SGB=-4.17128;VDB=0.450961;EFF=INTRON(MODIFIER||||451|LOC_Os11g13694|protein_coding|CODING|LOC_Os11g13694.1|2|1) FN-403.SNP.11:7522345 chr11:007522345 0 W/7522345-7522345 FN-403 Single Base Substitution G-T INTRON HOMO SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.11:7522345 chr11:007522345 0 W/7522345-7522345 FN403-S Single Base Substitution G-T INTRON HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3430-S.SNP.11:7526308 chr11:007526308 0 W/7526308-7526308 FN3430-S SNP A -> G AC=1;AN=184;BQB=0.986601;DP=2233;DP4=1152,1010,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00205e-06;MQSB=0.99193;RPB=0.971772;SGB=39.699;VDB=0.755657;EFF=INTRON(MODIFIER||||451|LOC_Os11g13694|protein_coding|CODING|LOC_Os11g13694.1|9|1) FN-97.SNP.11:7527030 chr11:007527030 0 W/7527030-7527030 FN-97 Single Base Substitution T-G INTRON HET SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1371-S.SNP.11:7538600 chr11:007538600 0 W/7538600-7538600 FN1371-S Single Base Substitution C-G INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2282.SNP.11:7539390 chr11:007539390 0 W/7539390-7539390 FN2282 SNP A -> T AC=1;AN=192;BQB=0.914048;DP=4931;DP4=2119,2458,16,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.9653e-18;MQSB=0.871752;RPB=0.122869;SGB=35.5131;VDB=0.573513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1666-S.SNP.11:7548442 chr11:007548442 0 W/7548442-7548442 FN1666-S SNP C -> T AC=1;AN=188;BQB=0.913126;DP=3382;DP4=1851,1486,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.7506e-13;MQSB=0.965725;RPB=0.110174;SGB=17.8846;VDB=0.154171;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.11:7551094 chr11:007551094 0 W/7551094-7551094 FN1049-S Single Base Substitution G-A INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN3846-S.SNP.11:7552012 chr11:007552012 0 W/7552012-7552012 FN3846-S SNP T -> A AC=2;AN=190;BQB=0.775184;DP=2885;DP4=1475,1289,15,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.68469e-13;MQSB=0.913612;RPB=0.712613;SGB=78.7471;VDB=0.889892;EFF=UTR_3_PRIME(MODIFIER||105||178|LOC_Os11g13720|protein_coding|CODING|LOC_Os11g13720.1|1|1) FN2129-S.SNP.11:7552677 chr11:007552677 0 W/7552677-7552677 FN2129-S SNP G -> T AC=2;AN=168;BQB=0.0103705;DP=3134;DP4=1670,1395,35,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.92709e-26;MQSB=0.950405;RPB=0.96289;SGB=114.556;VDB=0.423388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.11:7552729 chr11:007552729 0 W/7552729-7552729 FN2146-S SNP G -> C AC=1;AN=168;BQB=0.0624567;DP=3500;DP4=2263,1205,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.79668e-07;MQSB=0.968172;RPB=0.766907;SGB=-95.493;VDB=0.89599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.11:7552993 chr11:007552993 0 W/7552993-7552993 FN3676-S SNP A -> G AC=2;AN=190;BQB=0.998741;DP=2623;DP4=1510,1013,11,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.91713e-08;MQSB=0.869619;RPB=0.893045;SGB=57.4238;VDB=0.501602;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.11:7576846 chr11:007576846 0 W/7576846-7576846 FN-325 Single Base Substitution A-G INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN4272-S.SNP.11:7578561 chr11:007578561 0 W/7578561-7578561 FN4272-S SNP C -> A AC=1;AN=170;BQB=0.999625;DP=2002;DP4=1151,768,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.101898;MQB=0.886189;MQSB=0.00618369;RPB=0.698277;SGB=43.4296;VDB=0.0720987;EFF=INTRON(MODIFIER||||338|LOC_Os11g13780|protein_coding|CODING|LOC_Os11g13780.1|1|1) FN1572-S.SNP.11:7584810 chr11:007584810 0 W/7584810-7584810 FN1572-S Single Base Substitution C-G UTR_3_PRIME Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN-217.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN-217 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-238.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN-238 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-394.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN-394 Single Base Substitution G-A UTR_5_PRIME HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-87.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN-87 Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1117-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN1117-S Single Base Substitution G-A START_GAINED HET LOC_Os11g13800 expressed protein SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN1434-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN1434-S Single Base Substitution G-A START_GAINED HOMO LOC_Os11g13800 expressed protein SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1483-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN1483-S Single Base Substitution G-A START_GAINED Homo LOC_Os11g13800 expressed protein SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1640-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN1640-S Single Base Substitution G-A START_GAINED HET LOC_Os11g13800 expressed protein SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1719-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN1719-S SNP G -> A AC=1;AN=188;BQB=0.206303;DP=2862;DP4=1382,1439,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.16194e-07;MQSB=0.970393;RPB=0.916485;SGB=-14.9998;VDB=0.753732;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN2119-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN2119-S SNP G -> A AC=1;AN=168;BQB=0.778208;DP=3277;DP4=1524,1710,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.30885e-08;MQSB=0.996939;RPB=0.494772;SGB=56.6036;VDB=0.154007;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN3468-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN3468-S SNP G -> A AC=1;AN=184;BQB=0.927901;DP=2533;DP4=1009,1440,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.3744e-12;MQSB=0.951775;RPB=0.999982;SGB=80.3949;VDB=0.0343342;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN3521-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN3521-S SNP G -> A AC=2;AN=188;BQB=0.785551;DP=2570;DP4=1062,1443,5,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.48078e-11;MQSB=0.980244;RPB=0.999992;SGB=89.8686;VDB=0.506355;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN3659-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.551234;DP=2686;DP4=1034,1555,1,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.34678e-05;MQSB=0.943199;RPB=0.80846;SGB=36.1006;VDB=0.904475;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN4016-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN4016-S SNP G -> A AC=2;AN=168;BQB=0.966293;DP=2242;DP4=866,1271,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.23026e-10;MQSB=0.97737;RPB=0.423951;SGB=83.1885;VDB=0.389733;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN4107-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN4107-S SNP G -> A AC=2;AN=182;BQB=0.998668;DP=2738;DP4=1138,1509,7,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.53917e-12;MQSB=0.999975;RPB=0.996787;SGB=75.6874;VDB=0.3436;EFF=START_GAINED(LOW||||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),START_GAINED(LOW||||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),START_GAINED(LOW||||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1),UTR_5_PRIME(MODIFIER||870||453|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.1|2|1),UTR_5_PRIME(MODIFIER||870||447|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.2|2|1),UTR_5_PRIME(MODIFIER||1227||363|LOC_Os11g13800|protein_coding|CODING|LOC_Os11g13800.3|2|1) FN573-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN573-S Single Base Substitution G-A START_GAINED HOMO LOC_Os11g13800 expressed protein SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN976-S.SNP.11:7587452 chr11:007587452 0 W/7587452-7587452 FN976-S Single Base Substitution G-A START_GAINED HOMO LOC_Os11g13800 expressed protein SNo: 880, Mutant_ID: FN976-S, Generation: M2, Mutations: 72, Genes: 13, Seed availability: Yes. FN1650-S.SNP.11:7588458 chr11:007588458 0 W/7588458-7588458 FN1650-S Single Base Substitution T-C INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN899-S.SNP.11:7589924 chr11:007589924 0 W/7589924-7589924 FN899-S Single Base Substitution T-A INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3830-S.SNP.11:7589979 chr11:007589979 0 W/7589979-7589979 FN3830-S SNP C -> G AC=1;AN=190;BQB=0.938984;DP=2468;DP4=1185,1169,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.70103e-10;MQSB=0.809479;RPB=0.581967;SGB=67.3108;VDB=0.448638;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.11:7592353 chr11:007592353 0 W/7592353-7592353 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.690914;DP=2536;DP4=1217,1240,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000594428;MQSB=0.923091;RPB=0.878345;SGB=8.14452;VDB=0.671615;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.11:7596610 chr11:007596610 0 W/7596610-7596610 FN1114-S Single Base Substitution C-T INTRON HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1304-S.SNP.11:7598626 chr11:007598626 0 W/7598626-7598626 FN1304-S Single Base Substitution G-A INTRON HOMO SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN946-S.SNP.11:7604826 chr11:007604826 0 W/7604826-7604826 FN946-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN-258.SNP.11:7613677 chr11:007613677 0 W/7613677-7613677 FN-258 Single Base Substitution T-C INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3911-S.SNP.11:7617662 chr11:007617662 0 W/7617662-7617662 FN3911-S SNP G -> A AC=1;AN=158;BQB=0.959684;DP=2463;DP4=1333,1011,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.95134e-08;MQSB=0.993382;RPB=0.902481;SGB=34.0735;VDB=0.791295;EFF=INTRON(MODIFIER||||397|LOC_Os11g13820|protein_coding|CODING|LOC_Os11g13820.1|2|1) FN2241-S.SNP.11:7617691 chr11:007617691 0 W/7617691-7617691 FN2241-S SNP C -> T AC=1;AN=190;BQB=0.226026;DP=4574;DP4=2297,1951,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.61233e-09;MQSB=0.947129;RPB=0.934679;SGB=58.2031;VDB=0.297415;EFF=INTRON(MODIFIER||||397|LOC_Os11g13820|protein_coding|CODING|LOC_Os11g13820.1|2|1) FN2691-S.SNP.11:7622157 chr11:007622157 0 W/7622157-7622157 FN2691-S SNP C -> A AC=1;AN=200;BQB=0.988027;DP=4584;DP4=2097,2105,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33497e-14;MQSB=0.634881;RPB=0.998377;SGB=100.316;VDB=0.635095;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.11:7629472 chr11:007629472 0 W/7629472-7629472 FN1333-S Single Base Substitution G-C INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2472.SNP.11:7636487 chr11:007636487 0 W/7636487-7636487 FN2472 SNP T -> C AC=1;AN=200;BQB=0.723789;DP=4818;DP4=2239,2327,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88008e-09;MQSB=0.989378;RPB=0.992688;SGB=3.06925;VDB=0.582439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1585-S.SNP.11:7647331 chr11:007647331 0 W/7647331-7647331 FN1585-S Single Base Substitution T-A INTRON Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1585-S.SNP.11:7647333 chr11:007647333 0 W/7647333-7647333 FN1585-S Single Base Substitution C-A INTRON Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN-226.SNP.11:7651086 chr11:007651086 0 W/7651086-7651086 FN-226 Single Base Substitution C-T UTR_3_PRIME HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN4177-S.SNP.11:7660831 chr11:007660831 0 W/7660831-7660831 FN4177-S SNP T -> A AC=1;AN=168;BQB=0.913074;DP=2743;DP4=1458,1164,12,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.65572e-08;MQSB=0.696414;RPB=0.971587;SGB=41.7633;VDB=0.819218;EFF=UTR_5_PRIME(MODIFIER||88||159|LOC_Os11g13890|protein_coding|CODING|LOC_Os11g13890.6|2|1),INTRON(MODIFIER||||283|LOC_Os11g13890|protein_coding|CODING|LOC_Os11g13890.1|3|1),INTRON(MODIFIER||||245|LOC_Os11g13890|protein_coding|CODING|LOC_Os11g13890.2|3|1),INTRON(MODIFIER||||222|LOC_Os11g13890|protein_coding|CODING|LOC_Os11g13890.4|3|1),INTRON(MODIFIER||||186|LOC_Os11g13890|protein_coding|CODING|LOC_Os11g13890.5|3|1) FN666-S.SNP.11:7665351 chr11:007665351 0 W/7665351-7665351 FN666-S Single Base Substitution T-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN880-S.SNP.11:7675998 chr11:007675998 0 W/7675998-7675998 FN880-S Single Base Substitution T-G INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN1073-S.SNP.11:7705718 chr11:007705718 0 W/7705718-7705718 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN796-S.SNP.11:7726348 chr11:007726348 0 W/7726348-7726348 FN796-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g13960 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2209-S.SNP.11:7727635 chr11:007727635 0 W/7727635-7727635 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.75096;DP=4881;DP4=2501,2032,18,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.80815e-15;MQSB=0.270969;RPB=0.991999;SGB=22.7576;VDB=0.830342;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P459L|671|LOC_Os11g13960|protein_coding|CODING|LOC_Os11g13960.1|7|1) FN3994-S.SNP.11:7729946 chr11:007729946 0 W/7729946-7729946 FN3994-S SNP A -> T AC=1;AN=168;BQB=0.967888;DP=2584;DP4=1358,1160,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=8.67744e-07;MQSB=0.137957;RPB=0.994526;SGB=47.7421;VDB=0.248535;EFF=INTRON(MODIFIER||||671|LOC_Os11g13960|protein_coding|CODING|LOC_Os11g13960.1|1|1) FN781-S.SNP.11:7739524 chr11:007739524 0 W/7739524-7739524 FN781-S Single Base Substitution T-G INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN781-S.SNP.11:7739525 chr11:007739525 0 W/7739525-7739525 FN781-S Single Base Substitution G-A INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN781-S.SNP.11:7739526 chr11:007739526 0 W/7739526-7739526 FN781-S Single Base Substitution C-A INTERGENIC HOMO SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN2289.SNP.11:7744569 chr11:007744569 0 W/7744569-7744569 FN2289 SNP T -> G AC=1;AN=192;BQB=0.688468;DP=4752;DP4=2284,1782,21,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.63029e-17;MQSB=0.441764;RPB=0.0722094;SGB=96.8096;VDB=0.388071;EFF=INTERGENIC(MODIFIER||||||||||1) FN-53.SNP.11:7747765 chr11:007747765 0 W/7747765-7747765 FN-53 Single Base Substitution A-G INTERGENIC HOMO SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN4174-S.SNP.11:7751564 chr11:007751564 0 W/7751564-7751564 FN4174-S SNP T -> C AC=1;AN=170;BQB=0.747826;DP=2278;DP4=1164,961,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.97013e-07;MQSB=0.944836;RPB=0.258178;SGB=41.7633;VDB=0.0680605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.11:7753063 chr11:007753063 0 W/7753063-7753063 FN3659-S SNP A -> T AC=1;AN=190;BQB=0.497626;DP=3023;DP4=1551,1383,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.02045e-06;MQSB=0.999971;RPB=0.830358;SGB=1.00337;VDB=0.469713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.11:7761165 chr11:007761165 0 W/7761165-7761165 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.870057;DP=4054;DP4=2208,1657,7,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.71395e-07;MQSB=0.974228;RPB=0.929997;SGB=44.9538;VDB=0.809714;EFF=INTRON(MODIFIER||||1124|LOC_Os11g13990|protein_coding|CODING|LOC_Os11g13990.1|1|1) FN1443-S.SNP.11:7762528 chr11:007762528 0 W/7762528-7762528 FN1443-S Single Base Substitution T-C INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN-149.SNP.11:7785196 chr11:007785196 0 W/7785196-7785196 FN-149 Single Base Substitution G-A INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN-149.SNP.11:7785197 chr11:007785197 0 W/7785197-7785197 FN-149 Single Base Substitution A-G INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN3506-S.SNP.11:7790457 chr11:007790457 0 W/7790457-7790457 FN3506-S SNP C -> A AC=2;AN=188;BQB=0.946853;DP=3841;DP4=1716,2019,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.52044e-14;MQSB=0.600437;RPB=0.532892;SGB=85.5904;VDB=0.869507;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.11:7801195 chr11:007801195 0 W/7801195-7801195 FN3522-S SNP T -> C AC=1;AN=188;BQB=0.973546;DP=2651;DP4=1384,1214,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.06546e-06;MQSB=0.989526;RPB=0.209448;SGB=35.3493;VDB=0.201452;EFF=INTRON(MODIFIER||||972|LOC_Os11g14050|protein_coding|CODING|LOC_Os11g14050.1|16|1),INTRON(MODIFIER||||900|LOC_Os11g14050|protein_coding|CODING|LOC_Os11g14050.2|16|1) FN-274.SNP.11:7806242 chr11:007806242 0 W/7806242-7806242 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3502-S.SNP.11:7840358 chr11:007840358 0 W/7840358-7840358 FN3502-S SNP G -> A AC=2;AN=188;BQB=0.890664;DP=2932;DP4=1640,1207,20,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.88961e-14;MQSB=0.779732;RPB=0.0420694;SGB=78.5038;VDB=0.124306;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.11:7843452 chr11:007843452 0 W/7843452-7843452 FN4090-S SNP G -> A AC=1;AN=182;BQB=0.999718;DP=2926;DP4=1498,1347,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.020164;MQB=6.96708e-07;MQSB=0.0257514;RPB=0.986491;SGB=84.7091;VDB=0.0983212;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I1454|2122|LOC_Os11g14090|protein_coding|CODING|LOC_Os11g14090.1|6|1) FN3325-S.SNP.11:7856271 chr11:007856271 0 W/7856271-7856271 FN3325-S SNP C -> A AC=1;AN=184;BQB=0.473236;DP=2490;DP4=1092,1284,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.4863e-06;MQSB=0.909361;RPB=0.821163;SGB=35.7479;VDB=0.986798;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.11:7867663 chr11:007867663 0 W/7867663-7867663 FN1551-S Single Base Substitution A-G INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2564-S.SNP.11:7868216 chr11:007868216 0 W/7868216-7868216 FN2564-S SNP G -> A AC=2;AN=198;BQB=0.917359;DP=3646;DP4=1663,1641,6,6;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.68994e-07;MQSB=0.993177;RPB=0.567466;SGB=49.5489;VDB=0.628582;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.11:7868216 chr11:007868216 0 W/7868216-7868216 FN4202-S SNP G -> A AC=1;AN=170;BQB=0.982589;DP=1972;DP4=857,984,17,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.4172e-14;MQSB=0.129329;RPB=0.898847;SGB=83.0751;VDB=0.782714;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.11:7872054 chr11:007872054 0 W/7872054-7872054 FN406-S Single Base Substitution T-C INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN4001-S.SNP.11:7876076 chr11:007876076 0 W/7876076-7876076 FN4001-S SNP T -> A AC=1;AN=168;BQB=0.822689;DP=2851;DP4=1317,1436,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=4.36049e-09;MQSB=0.973556;RPB=0.829701;SGB=58.7637;VDB=0.432065;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.11:7880906 chr11:007880906 0 W/7880906-7880906 FN466-S Single Base Substitution G-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN731-S.SNP.11:7881643 chr11:007881643 0 W/7881643-7881643 FN731-S Single Base Substitution T-A INTERGENIC HOMO SNo: 656, Mutant_ID: FN731-S, Generation: M2, Mutations: 69, Genes: 36, Seed availability: Yes. FN2276-S.SNP.11:7881682 chr11:007881682 0 W/7881682-7881682 FN2276-S SNP G -> T AC=1;AN=190;BQB=0.800267;DP=5155;DP4=2448,2311,16,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000193986;MQB=4.48527e-13;MQSB=0.621921;RPB=0.844622;SGB=56.8601;VDB=0.755036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.11:7881741 chr11:007881741 0 W/7881741-7881741 FN3530-S SNP A -> T AC=2;AN=188;BQB=0.989753;DP=2857;DP4=1237,1492,14,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.05882e-21;MQSB=0.999871;RPB=0.485937;SGB=148.931;VDB=0.789105;EFF=INTERGENIC(MODIFIER||||||||||1) FN3530-S.SNP.11:7881749 chr11:007881749 0 W/7881749-7881749 FN3530-S SNP C -> T AC=2;AN=188;BQB=0.992498;DP=2873;DP4=1283,1469,16,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.38725e-21;MQSB=0.979615;RPB=0.0624301;SGB=144.388;VDB=0.677356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.11:7885327 chr11:007885327 0 W/7885327-7885327 FN2242-S SNP C -> A AC=1;AN=190;BQB=0.188457;DP=4413;DP4=1925,2100,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74057e-08;MQSB=0.873606;RPB=0.926375;SGB=26.2136;VDB=0.5;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.11:7887030 chr11:007887030 0 W/7887030-7887030 FN3792-S SNP T -> G AC=1;AN=190;BQB=0.961534;DP=2753;DP4=1335,1338,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.59457e-08;MQSB=0.998122;RPB=0.78864;SGB=49.0954;VDB=0.936239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.11:7888509 chr11:007888509 0 W/7888509-7888509 FN3538-S SNP C -> T AC=2;AN=188;BQB=0.915187;DP=2948;DP4=1381,1476,14,10;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=8.08352e-09;MQSB=0.000593663;RPB=0.43895;SGB=74.9605;VDB=0.845605;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.11:7888510 chr11:007888510 0 W/7888510-7888510 FN3538-S SNP A -> G AC=2;AN=188;BQB=0.464347;DP=2948;DP4=1396,1462,13,9;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0;MQB=1.04705e-07;MQSB=0.000800305;RPB=0.308154;SGB=94.4119;VDB=0.81358;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.11:7893420 chr11:007893420 0 W/7893420-7893420 FN-258 Single Base Substitution A-T INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN432-S.SNP.11:7900081 chr11:007900081 0 W/7900081-7900081 FN432-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN524-S.SNP.11:7902282 chr11:007902282 0 W/7902282-7902282 FN524-S Single Base Substitution T-A INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1490-S.SNP.11:7917114 chr11:007917114 0 W/7917114-7917114 FN1490-S Single Base Substitution T-G UTR_3_PRIME HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN-330.SNP.11:7918355 chr11:007918355 0 W/7918355-7918355 FN-330 Single Base Substitution G-T INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN-330.SNP.11:7918356 chr11:007918356 0 W/7918356-7918356 FN-330 Single Base Substitution A-T INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN4105-S.SNP.11:7923745 chr11:007923745 0 W/7923745-7923745 FN4105-S SNP C -> T AC=1;AN=182;BQB=0.945549;DP=2910;DP4=1547,1292,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.83048e-07;MQSB=0.976115;RPB=0.826324;SGB=28.6061;VDB=0.534701;EFF=INTERGENIC(MODIFIER||||||||||1) FN2460.SNP.11:7927601 chr11:007927601 0 W/7927601-7927601 FN2460 SNP G -> A AC=1;AN=200;BQB=0.722633;DP=4794;DP4=2583,1864,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.20924e-09;MQSB=0.987601;RPB=0.77847;SGB=-12.5051;VDB=0.914541;EFF=INTERGENIC(MODIFIER||||||||||1) FN693-S.SNP.11:7929399 chr11:007929399 0 W/7929399-7929399 FN693-S Single Base Substitution G-T INTERGENIC HET SNo: 624, Mutant_ID: FN693-S, Generation: M2, Mutations: 13, Genes: 29, Seed availability: Yes. FN564-S.SNP.11:7935894 chr11:007935894 0 W/7935894-7935894 FN564-S Single Base Substitution A-G INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN-235.SNP.11:7936815 chr11:007936815 0 W/7936815-7936815 FN-235 Single Base Substitution A-G INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN2611-S.SNP.11:7945910 chr11:007945910 0 W/7945910-7945910 FN2611-S SNP T -> G AC=1;AN=198;BQB=0.681948;DP=4443;DP4=1774,2415,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.48832e-12;MQSB=0.998676;RPB=0.678229;SGB=47.7211;VDB=0.659401;EFF=INTRON(MODIFIER||||196|LOC_Os11g14200|protein_coding|CODING|LOC_Os11g14200.1|1|1) FN3630-S.SNP.11:7949981 chr11:007949981 0 W/7949981-7949981 FN3630-S SNP A -> T AC=2;AN=190;BQB=0.967681;DP=2747;DP4=1338,1342,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.97401e-13;MQSB=0.998006;RPB=0.421709;SGB=90.0802;VDB=0.341868;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.11:7953533 chr11:007953533 0 W/7953533-7953533 FN3375-S SNP T -> A AC=1;AN=184;BQB=0.960621;DP=2724;DP4=1239,1364,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24898e-09;MQSB=0.41462;RPB=0.954226;SGB=56.8786;VDB=0.958243;EFF=INTERGENIC(MODIFIER||||||||||1) FN1018-S.SNP.11:7953702 chr11:007953702 0 W/7953702-7953702 FN1018-S Single Base Substitution A-G INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1687-S.SNP.11:7957205 chr11:007957205 0 W/7957205-7957205 FN1687-S SNP G -> A AC=1;AN=188;BQB=2.20716e-09;DP=3927;DP4=1902,1947,14,45;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.72867e-07;MQSB=0.969604;RPB=0.0107353;SGB=-1770.7;VDB=0.501745;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.11:7958776 chr11:007958776 0 W/7958776-7958776 FN-174 Single Base Substitution T-A INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1382-S.SNP.11:7966925 chr11:007966925 0 W/7966925-7966925 FN1382-S Single Base Substitution G-A INTRON HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2257-S.SNP.11:7969083 chr11:007969083 0 W/7969083-7969083 FN2257-S SNP G -> A AC=1;AN=190;BQB=0.991009;DP=3912;DP4=1686,1936,13,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.27834e-13;MQSB=0.00953821;RPB=0.868638;SGB=54.3062;VDB=0.266398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN1162-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1423-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1715-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN1715-S SNP G -> A AC=2;AN=188;BQB=0.983738;DP=1941;DP4=937,957,6,4;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.1982e-05;MQSB=0.99507;RPB=0.981181;SGB=10.8165;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.11301;DP=4188;DP4=2025,1935,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.15607e-10;MQSB=0.92453;RPB=0.94567;SGB=31.9395;VDB=0.765707;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN3821-S SNP G -> A AC=2;AN=190;BQB=0.998454;DP=2779;DP4=1394,1276,18,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000359842;MQB=1.07302e-17;MQSB=0.999704;RPB=0.95352;SGB=67.0756;VDB=0.0915779;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN4305-S SNP G -> A AC=1;AN=170;BQB=0.864354;DP=2395;DP4=1218,1096,12,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.88939e-15;MQSB=0.998424;RPB=0.405768;SGB=72.7472;VDB=0.0182046;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 FN755-S Single Base Substitution G-A INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. W464-2-1.SNP.11:7969526 chr11:007969526 0 W/7969526-7969526 W464-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-186.SNP.11:7978057 chr11:007978057 0 W/7978057-7978057 FN-186 Single Base Substitution A-G INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1517-S.SNP.11:7987108 chr11:007987108 0 W/7987108-7987108 FN1517-S Single Base Substitution T-C SYNONYMOUS_CODING Homo SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN945-S.SNP.11:7994472 chr11:007994472 0 W/7994472-7994472 FN945-S Single Base Substitution A-G INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2563-S.SNP.11:8018573 chr11:008018573 0 W/8018573-8018573 FN2563-S SNP C -> T AC=1;AN=198;BQB=0.578571;DP=4141;DP4=1867,1981,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.56324e-07;MQSB=0.503454;RPB=0.547369;SGB=1.37381;VDB=0.241431;EFF=UTR_3_PRIME(MODIFIER||194||341|LOC_Os11g14300|protein_coding|CODING|LOC_Os11g14300.1|10|1) FN2563-S.SNP.11:8018577 chr11:008018577 0 W/8018577-8018577 FN2563-S SNP A -> T AC=1;AN=198;BQB=0.501503;DP=4149;DP4=1935,1984,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.15364e-06;MQSB=0.843728;RPB=0.0951137;SGB=35.7638;VDB=0.0204797;EFF=UTR_3_PRIME(MODIFIER||190||341|LOC_Os11g14300|protein_coding|CODING|LOC_Os11g14300.1|10|1) FN3828-S.SNP.11:8024268 chr11:008024268 0 W/8024268-8024268 FN3828-S SNP T -> C AC=1;AN=190;BQB=0.996409;DP=2747;DP4=1344,1332,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.04345e-12;MQSB=0.998147;RPB=0.985889;SGB=76.4186;VDB=0.532093;EFF=INTRON(MODIFIER||||341|LOC_Os11g14300|protein_coding|CODING|LOC_Os11g14300.1|2|1) FN3828-S.SNP.11:8024271 chr11:008024271 0 W/8024271-8024271 FN3828-S SNP T -> A AC=1;AN=190;BQB=0.675052;DP=2715;DP4=1305,1309,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.21529e-12;MQSB=0.999975;RPB=0.881058;SGB=76.4186;VDB=0.538493;EFF=INTRON(MODIFIER||||341|LOC_Os11g14300|protein_coding|CODING|LOC_Os11g14300.1|2|1) FN3444-S.SNP.11:8029450 chr11:008029450 0 W/8029450-8029450 FN3444-S SNP G -> T AC=1;AN=184;BQB=0.703977;DP=2919;DP4=1540,1272,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45416e-05;MQSB=0.999762;RPB=0.37415;SGB=10.6662;VDB=0.086416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.11:8032481 chr11:008032481 0 W/8032481-8032481 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.998349;DP=2970;DP4=1329,1554,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.78174e-08;MQSB=0.994733;RPB=0.731565;SGB=57.786;VDB=0.866283;EFF=INTERGENIC(MODIFIER||||||||||1) FN544-S.SNP.11:8034011 chr11:008034011 0 W/8034011-8034011 FN544-S Single Base Substitution T-G INTERGENIC HOMO SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN3658-S.SNP.11:8035244 chr11:008035244 0 W/8035244-8035244 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.985231;DP=2883;DP4=1591,1202,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10901e-05;MQSB=0.857276;RPB=0.751528;SGB=35.4339;VDB=0.245164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.11:8037175 chr11:008037175 0 W/8037175-8037175 FN3354-S SNP C -> T AC=1;AN=184;BQB=0.847453;DP=3030;DP4=1559,1384,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.05479e-06;MQSB=0.898215;RPB=0.943892;SGB=44.2207;VDB=0.520342;EFF=INTRON(MODIFIER||||143|LOC_Os11g14320|protein_coding|CODING|LOC_Os11g14320.1|1|1) FN416-S.SNP.11:8041730 chr11:008041730 0 W/8041730-8041730 FN416-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g14330 retrotransposon protein, putative, unclassified, expressed SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN671-S.SNP.11:8042526 chr11:008042526 0 W/8042526-8042526 FN671-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. W138-2-1.SNP.11:8047233 chr11:008047233 0 W/8047233-8047233 W138-2-1 Single Base Substitution T-C INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3489-S.SNP.11:8050944 chr11:008050944 0 W/8050944-8050944 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.996773;DP=3318;DP4=1773,1467,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0229054;MQB=2.62864e-05;MQSB=9.12958e-05;RPB=0.438962;SGB=75.8731;VDB=0.686789;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D508|1070|LOC_Os11g14340|protein_coding|CODING|LOC_Os11g14340.1|2|1) FN4120-S.SNP.11:8057570 chr11:008057570 0 W/8057570-8057570 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.998948;DP=3350;DP4=1518,1754,10,12;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.00507463;MQB=0.000339076;MQSB=0.0271784;RPB=0.854086;SGB=67.2255;VDB=0.702192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E167K|873|LOC_Os11g14350|protein_coding|CODING|LOC_Os11g14350.1|1|1) FN2461.SNP.11:8057968 chr11:008057968 0 W/8057968-8057968 FN2461 SNP C -> A AC=2;AN=200;BQB=0.639106;DP=3788;DP4=1649,1816,19,16;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00237592;MQB=6.2993e-16;MQSB=0.0779884;RPB=0.864571;SGB=155.578;VDB=0.272526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F299L|873|LOC_Os11g14350|protein_coding|CODING|LOC_Os11g14350.1|1|1) FN-232.SNP.11:8058443 chr11:008058443 0 W/8058443-8058443 FN-232 Single Base Substitution C-T STOP_GAINED HET LOC_Os11g14350 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1448-S.SNP.11:8060660 chr11:008060660 0 W/8060660-8060660 FN1448-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN500-S.SNP.11:8067610 chr11:008067610 0 W/8067610-8067610 FN500-S Single Base Substitution G-A INTERGENIC HET SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1280-S.SNP.11:8072193 chr11:008072193 0 W/8072193-8072193 FN1280-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3752-S.SNP.11:8073066 chr11:008073066 0 W/8073066-8073066 FN3752-S SNP C -> T AC=2;AN=190;BQB=0.879762;DP=2464;DP4=1056,1305,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.10076e-13;MQSB=0.982275;RPB=0.889098;SGB=46.6446;VDB=0.605739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A164V|918|LOC_Os11g14380|protein_coding|CODING|LOC_Os11g14380.1|1|1) FN1184-S.SNP.11:8085180 chr11:008085180 0 W/8085180-8085180 FN1184-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN1184-S.SNP.11:8085181 chr11:008085181 0 W/8085181-8085181 FN1184-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN-372.SNP.11:8087822 chr11:008087822 0 W/8087822-8087822 FN-372 Single Base Substitution G-A INTERGENIC HOMO SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN239-S.SNP.11:8087822 chr11:008087822 0 W/8087822-8087822 FN239-S Single Base Substitution G-A INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2691-S.SNP.11:8087822 chr11:008087822 0 W/8087822-8087822 FN2691-S SNP G -> A AC=2;AN=200;BQB=0.728584;DP=4405;DP4=2247,1832,29,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000227015;MQB=4.63019e-26;MQSB=0.00732901;RPB=0.992237;SGB=229.261;VDB=0.0501775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.11:8087822 chr11:008087822 0 W/8087822-8087822 FN3524-S SNP G -> A AC=2;AN=188;BQB=0.371571;DP=3221;DP4=1453,1687,12,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08409e-16;MQSB=0.549221;RPB=0.0613913;SGB=74.3988;VDB=0.725096;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.11:8087822 chr11:008087822 0 W/8087822-8087822 FN3774-S SNP G -> A AC=2;AN=190;BQB=0.997331;DP=2850;DP4=1262,1492,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.98349e-13;MQSB=0.137151;RPB=0.924865;SGB=108.296;VDB=0.948792;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.11:8088195 chr11:008088195 0 W/8088195-8088195 FN1473-S Single Base Substitution A-G INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN696-S.SNP.11:8088195 chr11:008088195 0 W/8088195-8088195 FN696-S Single Base Substitution A-G INTERGENIC HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN1496-S.SNP.11:8089663 chr11:008089663 0 W/8089663-8089663 FN1496-S Single Base Substitution C-T INTERGENIC Homo SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN2545-S.SNP.11:8096130 chr11:008096130 0 W/8096130-8096130 FN2545-S SNP T -> G AC=2;AN=198;BQB=0.973018;DP=4251;DP4=1870,2163,8,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.63086e-10;MQSB=0.991671;RPB=0.886525;SGB=31.9395;VDB=0.0944972;EFF=INTRON(MODIFIER||||606|LOC_Os11g14420|protein_coding|CODING|LOC_Os11g14420.1|1|1) FN3956-S.SNP.11:8105714 chr11:008105714 0 W/8105714-8105714 FN3956-S SNP C -> T AC=1;AN=168;BQB=0.383654;DP=2762;DP4=1423,1226,4,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00644502;MQSB=0.93865;RPB=0.0377478;SGB=7.59999;VDB=0.237542;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.11:8110899 chr11:008110899 0 W/8110899-8110899 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.989875;DP=2712;DP4=1394,1236,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.73893e-05;MQSB=0.981323;RPB=0.937962;SGB=26.3271;VDB=0.525314;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.11:8115628 chr11:008115628 0 W/8115628-8115628 FN780-S Single Base Substitution T-A INTRON HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN880-S.SNP.11:8119934 chr11:008119934 0 W/8119934-8119934 FN880-S Single Base Substitution C-T INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3856-S.SNP.11:8121761 chr11:008121761 0 W/8121761-8121761 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.934443;DP=2401;DP4=1286,1006,10,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.46743e-07;MQSB=0.935044;RPB=0.996648;SGB=73.2838;VDB=0.850357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D459N|2041|LOC_Os11g14460|protein_coding|CODING|LOC_Os11g14460.1|1|1) FN3659-S.SNP.11:8135402 chr11:008135402 0 W/8135402-8135402 FN3659-S SNP G -> T AC=1;AN=190;BQB=0.999878;DP=2834;DP4=1285,1441,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03784e-07;MQSB=0.871806;RPB=0.965074;SGB=53.6492;VDB=0.0504729;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.11:8142180 chr11:008142180 0 W/8142180-8142180 FN3434-S SNP T -> C AC=1;AN=184;BQB=0.457055;DP=2525;DP4=1258,1187,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.32596e-06;MQSB=0.990487;RPB=0.999929;SGB=13.188;VDB=0.841615;EFF=INTERGENIC(MODIFIER||||||||||1) FN406-S.SNP.11:8142189 chr11:008142189 0 W/8142189-8142189 FN406-S Single Base Substitution T-C INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. W470-2-1.SNP.11:8146251 chr11:008146251 0 W/8146251-8146251 W470-2-1 Single Base Substitution C-T INTRON HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-275.SNP.11:8155086 chr11:008155086 0 W/8155086-8155086 FN-275 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g14520 expressed protein SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3360-S.SNP.11:8159375 chr11:008159375 0 W/8159375-8159375 FN3360-S SNP T -> A AC=1;AN=184;BQB=0.996705;DP=3514;DP4=1258,1838,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12101e-09;MQSB=0.544797;RPB=0.743323;SGB=53.3568;VDB=0.461507;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R29W|138|LOC_Os11g14525|protein_coding|CODING|LOC_Os11g14525.1|1|1) FN2309.SNP.11:8165507 chr11:008165507 0 W/8165507-8165507 FN2309 SNP A -> G AC=2;AN=192;BQB=0.757392;DP=4729;DP4=2186,2030,11,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.78248e-18;MQSB=0.999972;RPB=0.970966;SGB=107.503;VDB=0.105985;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.2|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.3|3|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.4|5|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.5|4|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgC|R238|584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.6|3|1) FN670-S.SNP.11:8167260 chr11:008167260 0 W/8167260-8167260 FN670-S Single Base Substitution T-A INTRON HET SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN-42.SNP.11:8168008 chr11:008168008 0 W/8168008-8168008 FN-42 Single Base Substitution G-T INTRON Homo SNo: 42, Mutant_ID: FN-42, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2092-S.SNP.11:8170034 chr11:008170034 0 W/8170034-8170034 FN2092-S SNP G -> A AC=1;AN=168;BQB=0.340066;DP=2754;DP4=1176,1501,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.76488e-05;MQSB=0.993654;RPB=0.639248;SGB=-36.659;VDB=0.890202;EFF=UTR_5_PRIME(MODIFIER||3519||584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.1|1|1),UTR_5_PRIME(MODIFIER||3519||584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.2|1|1),UTR_5_PRIME(MODIFIER||3519||584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.3|1|1),UTR_5_PRIME(MODIFIER||3519||584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.5|1|1),UTR_5_PRIME(MODIFIER||3519||223|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.7|1|1),UTR_5_PRIME(MODIFIER||3519||584|LOC_Os11g14544|protein_coding|CODING|LOC_Os11g14544.4|1|1) FN2094-S.SNP.11:8174652 chr11:008174652 0 W/8174652-8174652 FN2094-S SNP C -> T AC=1;AN=168;BQB=0.117428;DP=3393;DP4=1523,1829,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=21;MQ0F=0.268199;MQB=0.206512;MQSB=2.09198e-19;RPB=0.83637;SGB=-92.9238;VDB=0.941136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.11:8177193 chr11:008177193 0 W/8177193-8177193 FN2483 SNP G -> A AC=1;AN=200;BQB=0.0832868;DP=4450;DP4=2053,2129,13,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0114607;MQB=0.000252622;MQSB=0.603668;RPB=0.930679;SGB=47.7211;VDB=0.457579;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P1342S|1600|LOC_Os11g14560|protein_coding|CODING|LOC_Os11g14560.1|11|1) FN3661-S.SNP.11:8181103 chr11:008181103 0 W/8181103-8181103 FN3661-S SNP G -> A AC=1;AN=190;BQB=0.594798;DP=2866;DP4=1356,1380,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.95549e-11;MQSB=0.987463;RPB=0.697542;SGB=71.6393;VDB=0.654681;EFF=INTRON(MODIFIER||||1600|LOC_Os11g14560|protein_coding|CODING|LOC_Os11g14560.1|9|1) FN3965-S.SNP.11:8187127 chr11:008187127 0 W/8187127-8187127 FN3965-S SNP A -> G AC=2;AN=168;BQB=0.995965;DP=2740;DP4=1331,1254,19,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.95034e-27;MQSB=0.920333;RPB=0.981223;SGB=185.22;VDB=0.97381;EFF=INTRON(MODIFIER||||1600|LOC_Os11g14560|protein_coding|CODING|LOC_Os11g14560.1|1|1) FN2452.SNP.11:8192261 chr11:008192261 0 W/8192261-8192261 FN2452 SNP G -> A AC=1;AN=200;BQB=0.679587;DP=2524;DP4=1704,631,9,2;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000396197;MQB=0.000133637;MQSB=6.35652e-13;RPB=0.952334;SGB=29.4541;VDB=0.902127;EFF=INTERGENIC(MODIFIER||||||||||1) FN1337-S.SNP.11:8195759 chr11:008195759 0 W/8195759-8195759 FN1337-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN3626-S.SNP.11:8198128 chr11:008198128 0 W/8198128-8198128 FN3626-S SNP A -> T AC=2;AN=190;BQB=0.849511;DP=2513;DP4=1394,963,14,2;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.33965e-10;MQSB=0.992502;RPB=0.967422;SGB=67.3108;VDB=0.163924;EFF=UTR_3_PRIME(MODIFIER||387||566|LOC_Os11g14570|protein_coding|CODING|LOC_Os11g14570.1|5|1),UTR_3_PRIME(MODIFIER||387||566|LOC_Os11g14570|protein_coding|CODING|LOC_Os11g14570.2|5|1) FN1572-S.SNP.11:8201250 chr11:008201250 0 W/8201250-8201250 FN1572-S Single Base Substitution T-A INTRON Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN2265-S.SNP.11:8216108 chr11:008216108 0 W/8216108-8216108 FN2265-S SNP T -> C AC=1;AN=190;BQB=0.173446;DP=4660;DP4=2491,1942,19,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01736e-17;MQSB=0.998462;RPB=0.999937;SGB=100.07;VDB=0.948568;EFF=INTRON(MODIFIER||||662|LOC_Os11g14590|protein_coding|CODING|LOC_Os11g14590.1|1|1) FN817-S.SNP.11:8226100 chr11:008226100 0 W/8226100-8226100 FN817-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 734, Mutant_ID: FN817-S, Generation: M2, Mutations: 62, Genes: 28, Seed availability: Yes. FN-283.SNP.11:8226727 chr11:008226727 0 W/8226727-8226727 FN-283 Single Base Substitution C-A INTRON HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3854-S.SNP.11:8229727 chr11:008229727 0 W/8229727-8229727 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.950082;DP=2360;DP4=1108,1171,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00013615;MQSB=0.983151;RPB=0.708086;SGB=33.9591;VDB=0.931315;EFF=INTRON(MODIFIER||||1847|LOC_Os11g14610|protein_coding|CODING|LOC_Os11g14610.1|4|1) FN755-S.SNP.11:8232291 chr11:008232291 0 W/8232291-8232291 FN755-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g14610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3827-S.SNP.11:8232577 chr11:008232577 0 W/8232577-8232577 FN3827-S SNP G -> A AC=2;AN=190;BQB=0.902636;DP=2664;DP4=1325,1244,14,18;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0045045;MQB=1.05296e-12;MQSB=0.000292795;RPB=0.605312;SGB=140.173;VDB=0.83541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1292M|1847|LOC_Os11g14610|protein_coding|CODING|LOC_Os11g14610.1|5|1) FN1279-S.SNP.11:8234710 chr11:008234710 0 W/8234710-8234710 FN1279-S Single Base Substitution C-T INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3937-S.SNP.11:8235549 chr11:008235549 0 W/8235549-8235549 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.96439;DP=2791;DP4=1288,1344,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.88947e-09;MQSB=0.962636;RPB=0.615483;SGB=68.9144;VDB=0.705645;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.11:8238788 chr11:008238788 0 W/8238788-8238788 FN1412-S Single Base Substitution T-G INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2721-S.SNP.11:8238788 chr11:008238788 0 W/8238788-8238788 FN2721-S SNP T -> G AC=1;AN=200;BQB=0.94845;DP=4859;DP4=2294,2415,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.231e-08;MQSB=0.942561;RPB=0.0653798;SGB=36.6644;VDB=0.525775;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.11:8238788 chr11:008238788 0 W/8238788-8238788 FN3839-S SNP T -> G AC=2;AN=190;BQB=0.985847;DP=2669;DP4=1302,1266,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.70905e-16;MQSB=0.991435;RPB=0.988077;SGB=78.7471;VDB=0.474345;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.11:8238788 chr11:008238788 0 W/8238788-8238788 FN447-S Single Base Substitution T-G INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN1273-S.SNP.11:8239495 chr11:008239495 0 W/8239495-8239495 FN1273-S Single Base Substitution C-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1701-S.SNP.11:8239495 chr11:008239495 0 W/8239495-8239495 FN1701-S SNP C -> T AC=1;AN=188;BQB=0.00887074;DP=3870;DP4=2007,1825,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.835e-06;MQSB=0.981935;RPB=0.766608;SGB=-114.435;VDB=0.831349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:8242108 chr11:008242108 0 W/8242108-8242108 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.756015;DP=3998;DP4=1942,1829,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.95553e-08;MQSB=0.780082;RPB=0.291666;SGB=43.7442;VDB=0.174567;EFF=INTERGENIC(MODIFIER||||||||||1) W481-5-1.SNP.11:8247020 chr11:008247020 0 W/8247020-8247020 W481-5-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g14630 expressed protein SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1696-S.SNP.11:8249352 chr11:008249352 0 W/8249352-8249352 FN1696-S SNP G -> T AC=1;AN=188;BQB=0.501545;DP=4194;DP4=1959,2200,16,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.07413e-11;MQSB=0.914957;RPB=0.979338;SGB=-39.1914;VDB=0.927001;EFF=INTERGENIC(MODIFIER||||||||||1) FN1675-S.SNP.11:8252707 chr11:008252707 0 W/8252707-8252707 FN1675-S SNP C -> G AC=1;AN=188;BQB=7.78394e-05;DP=3793;DP4=1856,1892,15,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.59548e-08;MQSB=0.996701;RPB=0.199798;SGB=-242.703;VDB=0.704103;EFF=INTRON(MODIFIER||||220|LOC_Os11g14640|protein_coding|CODING|LOC_Os11g14640.1|1|1) FN1094-S.SNP.11:8257237 chr11:008257237 0 W/8257237-8257237 FN1094-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g14650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1227-S.SNP.11:8257313 chr11:008257313 0 W/8257313-8257313 FN1227-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g14650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN3416-S.SNP.11:8257492 chr11:008257492 0 W/8257492-8257492 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.740306;DP=3297;DP4=1718,1527,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00055e-05;MQSB=0.958187;RPB=0.45149;SGB=15.7097;VDB=0.243231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S1012L|1535|LOC_Os11g14650|protein_coding|CODING|LOC_Os11g14650.1|2|1) FN1217-S.SNP.11:8258990 chr11:008258990 0 W/8258990-8258990 FN1217-S Single Base Substitution C-G INTRON HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3287-S.SNP.11:8264015 chr11:008264015 0 W/8264015-8264015 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.770998;DP=2675;DP4=1248,1328,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.35715e-11;MQSB=0.899597;RPB=0.9936;SGB=98.4821;VDB=0.9223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D137V|186|LOC_Os11g14660|protein_coding|CODING|LOC_Os11g14660.1|2|1) FN2545-S.SNP.11:8264479 chr11:008264479 0 W/8264479-8264479 FN2545-S SNP C -> A AC=1;AN=198;BQB=0.770666;DP=3971;DP4=1824,1918,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.83074e-05;MQSB=0.771924;RPB=0.726852;SGB=18.5788;VDB=0.834597;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.11:8265115 chr11:008265115 0 W/8265115-8265115 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.61087;DP=2797;DP4=1551,1053,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000357526;MQB=0.000209817;MQSB=0.000126005;RPB=0.154793;SGB=44.5415;VDB=0.107516;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.11:8269516 chr11:008269516 0 W/8269516-8269516 FN-132 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN-401.SNP.11:8270110 chr11:008270110 0 W/8270110-8270110 FN-401 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g14680 hypothetical protein SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN1020-S.SNP.11:8270852 chr11:008270852 0 W/8270852-8270852 FN1020-S Single Base Substitution T-G INTERGENIC HOMO SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2317.SNP.11:8271494 chr11:008271494 0 W/8271494-8271494 FN2317 SNP C -> A AC=1;AN=192;BQB=0.29404;DP=4805;DP4=2664,1873,6,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208117;MQB=4.25748e-08;MQSB=0.882554;RPB=0.709731;SGB=36.2157;VDB=0.953859;EFF=INTERGENIC(MODIFIER||||||||||1) FN412-S.SNP.11:8275730 chr11:008275730 0 W/8275730-8275730 FN412-S Single Base Substitution T-A INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN524-S.SNP.11:8278287 chr11:008278287 0 W/8278287-8278287 FN524-S Single Base Substitution G-A INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN4156-S.SNP.11:8278655 chr11:008278655 0 W/8278655-8278655 FN4156-S SNP G -> A AC=2;AN=170;BQB=0.999711;DP=2376;DP4=1090,1202,6,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.10395e-12;MQSB=0.848946;RPB=0.766777;SGB=92.2986;VDB=0.122022;EFF=INTERGENIC(MODIFIER||||||||||1) FN2169-S.SNP.11:8280508 chr11:008280508 0 W/8280508-8280508 FN2169-S SNP T -> G AC=2;AN=168;BQB=0.120186;DP=4464;DP4=2033,2371,22,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000224014;MQB=7.4906e-21;MQSB=0.999877;RPB=0.869141;SGB=-53.7345;VDB=0.671421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.11:8285193 chr11:008285193 0 W/8285193-8285193 FN1412-S Single Base Substitution T-C INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-142.SNP.11:8291868 chr11:008291868 0 W/8291868-8291868 FN-142 Single Base Substitution C-T INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3448-S.SNP.11:8292203 chr11:008292203 0 W/8292203-8292203 FN3448-S SNP C -> T AC=1;AN=184;BQB=0.841471;DP=2418;DP4=1571,700,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000413565;MQB=2.07835e-05;MQSB=0.999221;RPB=0.194264;SGB=25.1826;VDB=0.436395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.11:8295802 chr11:008295802 0 W/8295802-8295802 FN2105-S SNP G -> A AC=1;AN=168;BQB=0.0487706;DP=4007;DP4=2090,1886,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.000998253;MQB=0.0403328;MQSB=0.00127326;RPB=0.999758;SGB=-82.6471;VDB=0.876905;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W331*|581|LOC_Os11g14710|protein_coding|CODING|LOC_Os11g14710.1|1|1);LOF=(LOC_Os11g14710|LOC_Os11g14710|1|1.00);NMD=(LOC_Os11g14710|LOC_Os11g14710|1|1.00) FN2658-S.SNP.11:8297218 chr11:008297218 0 W/8297218-8297218 FN2658-S SNP T -> A AC=1;AN=200;BQB=0.890168;DP=4581;DP4=2189,2204,11,18;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00742196;MQB=1.57296e-16;MQSB=0.97012;RPB=0.141274;SGB=-409.655;VDB=0.900512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D556E|581|LOC_Os11g14710|protein_coding|CODING|LOC_Os11g14710.1|3|1) FN1162-S.SNP.11:8298894 chr11:008298894 0 W/8298894-8298894 FN1162-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g14720 expressed protein SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN1579-S.SNP.11:8306214 chr11:008306214 0 W/8306214-8306214 FN1579-S Single Base Substitution T-A INTRON HET SNo: 1316, Mutant_ID: FN1579-S, Generation: M2, Mutations: 60, Genes: 10, Seed availability: Yes. FN1255-S.SNP.11:8307460 chr11:008307460 0 W/8307460-8307460 FN1255-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN2105-S.SNP.11:8312778 chr11:008312778 0 W/8312778-8312778 FN2105-S SNP T -> A AC=1;AN=168;BQB=0.0660897;DP=4180;DP4=2019,2111,18,20;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.084689;MQB=0.00248161;MQSB=1.30626e-31;RPB=0.455047;SGB=-176.456;VDB=0.726682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.11:8312779 chr11:008312779 0 W/8312779-8312779 FN2105-S SNP C -> T AC=1;AN=168;BQB=0.132115;DP=4168;DP4=2008,2103,23,19;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.084453;MQB=0.00892392;MQSB=2.62262e-32;RPB=0.483719;SGB=-283.582;VDB=0.90118;EFF=INTERGENIC(MODIFIER||||||||||1) FN-359.SNP.11:8323875 chr11:008323875 0 W/8323875-8323875 FN-359 Single Base Substitution G-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN4078-S.SNP.11:8327685 chr11:008327685 0 W/8327685-8327685 FN4078-S SNP C -> A AC=2;AN=182;BQB=0.992135;DP=2775;DP4=1296,1397,8,13;HOB=0.0217365;ICB=0.494567;MQ=47;MQ0F=0.00216216;MQB=5.37938e-07;MQSB=0.0288884;RPB=0.996006;SGB=63.7146;VDB=0.2537;EFF=INTRON(MODIFIER||||272|LOC_Os11g14790|protein_coding|CODING|LOC_Os11g14790.1|1|1) FN500-S.SNP.11:8329289 chr11:008329289 0 W/8329289-8329289 FN500-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g14790 retrotransposon protein, putative, unclassified, expressed SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN819-S.SNP.11:8330475 chr11:008330475 0 W/8330475-8330475 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3919-S.SNP.11:8335885 chr11:008335885 0 W/8335885-8335885 FN3919-S SNP G -> A AC=1;AN=158;BQB=0.962118;DP=2364;DP4=1124,1151,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.00930626;MQB=0.0148411;MQSB=0.00703017;RPB=0.997774;SGB=57.6596;VDB=0.600086;EFF=INTRON(MODIFIER||||342|LOC_Os11g14810|protein_coding|CODING|LOC_Os11g14810.1|2|1) FN2422.SNP.11:8337668 chr11:008337668 0 W/8337668-8337668 FN2422 SNP T -> A AC=1;AN=200;BQB=0.881385;DP=4787;DP4=2674,1877,15,4;HOB=5e-05;ICB=0.0001005;MQ=16;MQ0F=0.539169;MQB=0.0704515;MQSB=0;RPB=0.990842;SGB=58.2954;VDB=0.136845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.11:8339442 chr11:008339442 0 W/8339442-8339442 FN2487 SNP A -> G AC=1;AN=200;BQB=0.346836;DP=4679;DP4=2465,1943,19,13;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00170977;MQB=4.49109e-10;MQSB=1.2069e-05;RPB=0.644435;SGB=141.763;VDB=0.614619;EFF=INTERGENIC(MODIFIER||||||||||1) FN1448-S.SNP.11:8342691 chr11:008342691 0 W/8342691-8342691 FN1448-S Single Base Substitution C-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN990-S.SNP.11:8343914 chr11:008343914 0 W/8343914-8343914 FN990-S Single Base Substitution C-T INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2242-S.SNP.11:8344670 chr11:008344670 0 W/8344670-8344670 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.974561;DP=4804;DP4=2071,2483,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64135e-07;MQSB=0.574541;RPB=0.99816;SGB=21.1058;VDB=0.826571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.11:8344715 chr11:008344715 0 W/8344715-8344715 FN1024-S Single Base Substitution G-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. 701-3.SNP.11:8348240 chr11:008348240 0 W/8348240-8348240 701-3 Single Base Substitution C-T INTRON HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. 701-3.SNP.11:8348240 chr11:008348240 0 W/8348240-8348240 701-3 Single Base Substitution C-T INTRON Homo SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN2673-S.SNP.11:8352051 chr11:008352051 0 W/8352051-8352051 FN2673-S SNP T -> C AC=1;AN=200;BQB=0.695911;DP=4966;DP4=2231,2517,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201369;MQB=5.1598e-11;MQSB=0.917091;RPB=0.216899;SGB=32.0901;VDB=0.493575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3802-S.SNP.11:8352879 chr11:008352879 0 W/8352879-8352879 FN3802-S SNP A -> G AC=2;AN=190;BQB=0.729372;DP=2446;DP4=1172,1167,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.00229e-12;MQSB=0.992467;RPB=0.76987;SGB=56.8601;VDB=0.967199;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.11:8353401 chr11:008353401 0 W/8353401-8353401 FN1400-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN3854-S.SNP.11:8355559 chr11:008355559 0 W/8355559-8355559 FN3854-S SNP T -> G AC=1;AN=158;BQB=0.784895;DP=2496;DP4=1208,1171,9,1;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62153e-05;MQSB=0.805498;RPB=0.864317;SGB=9.60209;VDB=0.741871;EFF=INTERGENIC(MODIFIER||||||||||1) FN869-S.SNP.11:8358715 chr11:008358715 0 W/8358715-8358715 FN869-S Single Base Substitution C-T INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2440.SNP.11:8374860 chr11:008374860 0 W/8374860-8374860 FN2440 SNP A -> G AC=1;AN=200;BQB=0.899297;DP=4703;DP4=2250,2098,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74217e-09;MQSB=0.769561;RPB=0.9967;SGB=-11.8999;VDB=0.0272548;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.11:8376242 chr11:008376242 0 W/8376242-8376242 FN793-S Single Base Substitution A-T INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN421-S.SNP.11:8380402 chr11:008380402 0 W/8380402-8380402 FN421-S Single Base Substitution A-G INTRON HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN-170.SNP.11:8383437 chr11:008383437 0 W/8383437-8383437 FN-170 Single Base Substitution T-C INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN421-S.SNP.11:8383809 chr11:008383809 0 W/8383809-8383809 FN421-S Single Base Substitution A-G INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2339.SNP.11:8384767 chr11:008384767 0 W/8384767-8384767 FN2339 SNP A -> G AC=1;AN=192;BQB=0.286809;DP=4538;DP4=1841,2245,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.64945e-07;MQSB=0.904867;RPB=0.0834946;SGB=21.2209;VDB=0.431328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3901-S.SNP.11:8385242 chr11:008385242 0 W/8385242-8385242 FN3901-S SNP C -> G AC=1;AN=158;BQB=0.894482;DP=1838;DP4=681,1083,2,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.81451e-07;MQSB=0.56236;RPB=0.855329;SGB=34.0735;VDB=0.838639;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.11:8386395 chr11:008386395 0 W/8386395-8386395 FN2260-S SNP G -> T AC=1;AN=190;BQB=0.39445;DP=4485;DP4=2142,1918,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000222965;MQB=3.19723e-08;MQSB=0.999115;RPB=0.880535;SGB=50.3161;VDB=0.896341;EFF=INTERGENIC(MODIFIER||||||||||1) FN-221.SNP.11:8397153 chr11:008397153 0 W/8397153-8397153 FN-221 Single Base Substitution A-C INTERGENIC HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN2320.SNP.11:8397417 chr11:008397417 0 W/8397417-8397417 FN2320 SNP G -> A AC=2;AN=192;BQB=0.370849;DP=5156;DP4=2361,2402,17,14;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=2.5639e-14;MQSB=0.00631896;RPB=0.977587;SGB=135.933;VDB=0.969974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.11:8399356 chr11:008399356 0 W/8399356-8399356 FN3627-S SNP G -> A AC=1;AN=190;BQB=0.968418;DP=2611;DP4=1104,1428,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0164688;MQB=5.93539e-06;MQSB=0.590191;RPB=0.252422;SGB=36.1006;VDB=0.963478;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.11:8400291 chr11:008400291 0 W/8400291-8400291 FN541-S Single Base Substitution T-C INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN-192.SNP.11:8400577 chr11:008400577 0 W/8400577-8400577 FN-192 Single Base Substitution G-A INTERGENIC HOMO SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN2223-S.SNP.11:8403512 chr11:008403512 0 W/8403512-8403512 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.978807;DP=4867;DP4=2431,2125,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00308198;MQB=5.84023e-16;MQSB=0.868279;RPB=0.249231;SGB=-6.57546;VDB=0.683589;EFF=INTRON(MODIFIER||||320|LOC_Os11g14930|protein_coding|CODING|LOC_Os11g14930.1|1|1) FN-54.SNP.11:8407239 chr11:008407239 0 W/8407239-8407239 FN-54 Single Base Substitution A-G INTERGENIC HOMO SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN2198-S.SNP.11:8407239 chr11:008407239 0 W/8407239-8407239 FN2198-S SNP A -> G AC=2;AN=190;BQB=0.930112;DP=4529;DP4=2270,1898,26,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000220799;MQB=5.53606e-21;MQSB=0.0138479;RPB=0.978555;SGB=92.6144;VDB=0.914398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.11:8407239 chr11:008407239 0 W/8407239-8407239 FN3467-S SNP A -> G AC=2;AN=184;BQB=0.864003;DP=2616;DP4=1270,1223,17,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.09066e-16;MQSB=0.989692;RPB=0.945484;SGB=88.5747;VDB=0.293724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3732-S.SNP.11:8407239 chr11:008407239 0 W/8407239-8407239 FN3732-S SNP A -> G AC=2;AN=190;BQB=0.999837;DP=2666;DP4=1338,1183,9,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.71945e-11;MQSB=0.990392;RPB=0.787449;SGB=94.6341;VDB=0.150123;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.11:8407239 chr11:008407239 0 W/8407239-8407239 FN763-S Single Base Substitution A-G INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1726-S.SNP.11:8415368 chr11:008415368 0 W/8415368-8415368 FN1726-S SNP A -> C AC=1;AN=188;BQB=0.852657;DP=3778;DP4=1928,1811,16,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.09394e-13;MQSB=0.984719;RPB=0.970972;SGB=-75.0128;VDB=0.63796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.11:8417470 chr11:008417470 0 W/8417470-8417470 FN3971-S SNP C -> A AC=1;AN=168;BQB=0.97948;DP=2940;DP4=1554,1276,4,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000319964;MQSB=0.966143;RPB=0.848616;SGB=21.16;VDB=0.269736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.11:8422277 chr11:008422277 0 W/8422277-8422277 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.676449;DP=4051;DP4=1393,2190,5,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000246853;MQB=1.97997e-09;MQSB=0.0173438;RPB=0.686218;SGB=80.9724;VDB=0.904329;EFF=INTRON(MODIFIER||||476|LOC_Os11g14950|protein_coding|CODING|LOC_Os11g14950.1|1|1) FN230-S.SNP.11:8430313 chr11:008430313 0 W/8430313-8430313 FN230-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN2680-S.SNP.11:8430313 chr11:008430313 0 W/8430313-8430313 FN2680-S SNP G -> A AC=2;AN=200;BQB=0.862588;DP=5312;DP4=2397,2548,29,35;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0.0222139;MQB=5.71397e-18;MQSB=0.623541;RPB=0.379216;SGB=289.128;VDB=0.562682;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R1657|2027|LOC_Os11g14970|protein_coding|CODING|LOC_Os11g14970.1|2|1) FN4114-S.SNP.11:8430313 chr11:008430313 0 W/8430313-8430313 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.876112;DP=3389;DP4=1641,1690,9,6;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.0256713;MQB=0.00120451;MQSB=0.481656;RPB=0.293171;SGB=42.6494;VDB=0.438312;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R1657|2027|LOC_Os11g14970|protein_coding|CODING|LOC_Os11g14970.1|2|1) FN713-S.SNP.11:8430313 chr11:008430313 0 W/8430313-8430313 FN713-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN3658-S.SNP.11:8445607 chr11:008445607 0 W/8445607-8445607 FN3658-S SNP A -> T AC=1;AN=190;BQB=0.840141;DP=3173;DP4=1704,1329,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.16891e-08;MQSB=0.985624;RPB=0.610021;SGB=49.0954;VDB=0.383964;EFF=INTRON(MODIFIER||||148|LOC_Os11g14990|protein_coding|CODING|LOC_Os11g14990.1|1|1) FN3457-S.SNP.11:8445858 chr11:008445858 0 W/8445858-8445858 FN3457-S SNP C -> T AC=1;AN=184;BQB=0.934176;DP=3045;DP4=1811,1167,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82175e-09;MQSB=0.93539;RPB=0.593686;SGB=57.786;VDB=0.16116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G33S|148|LOC_Os11g14990|protein_coding|CODING|LOC_Os11g14990.1|1|1) FN722-S.SNP.11:8451532 chr11:008451532 0 W/8451532-8451532 FN722-S Single Base Substitution C-T INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN3510-S.SNP.11:8453011 chr11:008453011 0 W/8453011-8453011 FN3510-S SNP G -> A AC=1;AN=188;BQB=0.094682;DP=2728;DP4=1494,1040,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.25492e-06;MQSB=0.907583;RPB=0.140412;SGB=-83.9838;VDB=0.700563;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.11:8460261 chr11:008460261 0 W/8460261-8460261 FN-163 Single Base Substitution G-C INTERGENIC HOMO SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2691-S.SNP.11:8460332 chr11:008460332 0 W/8460332-8460332 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.979507;DP=5404;DP4=2542,2409,16,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.48956e-15;MQSB=0.988301;RPB=0.997294;SGB=-41.6328;VDB=0.279158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.11:8460929 chr11:008460929 0 W/8460929-8460929 FN1615-S Single Base Substitution G-T INTERGENIC Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN3722-S.SNP.11:8464552 chr11:008464552 0 W/8464552-8464552 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.981826;DP=3263;DP4=1646,1499,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.72182e-16;MQSB=0.963488;RPB=0.844401;SGB=49.1985;VDB=0.356263;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.11:8465216 chr11:008465216 0 W/8465216-8465216 FN-216 Single Base Substitution A-T INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2480.SNP.11:8469325 chr11:008469325 0 W/8469325-8469325 FN2480 SNP G -> T AC=2;AN=200;BQB=0.985074;DP=4699;DP4=2349,2095,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.40994e-20;MQSB=0.752795;RPB=0.988933;SGB=84.1935;VDB=0.723266;EFF=UTR_3_PRIME(MODIFIER||126||203|LOC_Os11g15040|protein_coding|CODING|LOC_Os11g15040.1|4|1),UTR_3_PRIME(MODIFIER||126||203|LOC_Os11g15040|protein_coding|CODING|LOC_Os11g15040.2|4|1),UTR_3_PRIME(MODIFIER||126||203|LOC_Os11g15040|protein_coding|CODING|LOC_Os11g15040.3|3|1),UTR_3_PRIME(MODIFIER||126||203|LOC_Os11g15040|protein_coding|CODING|LOC_Os11g15040.4|3|1),UTR_3_PRIME(MODIFIER||126||203|LOC_Os11g15040|protein_coding|CODING|LOC_Os11g15040.5|2|1) FN987-S.SNP.11:8471526 chr11:008471526 0 W/8471526-8471526 FN987-S Single Base Substitution C-T INTERGENIC HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN-211.SNP.11:8480539 chr11:008480539 0 W/8480539-8480539 FN-211 Single Base Substitution A-T INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3477-S.SNP.11:8480746 chr11:008480746 0 W/8480746-8480746 FN3477-S SNP G -> A AC=1;AN=184;BQB=0.716506;DP=2906;DP4=1574,1221,15,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.00882e-11;MQSB=0.845021;RPB=0.688159;SGB=80.3949;VDB=0.818561;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.11:8484380 chr11:008484380 0 W/8484380-8484380 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.901588;DP=2427;DP4=1140,1218,8,15;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.36273e-12;MQSB=0.962959;RPB=0.953368;SGB=96.7413;VDB=0.145508;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L662|683|LOC_Os11g15070|protein_coding|CODING|LOC_Os11g15070.1|7|1) FN-73.SNP.11:8485918 chr11:008485918 0 W/8485918-8485918 FN-73 Single Base Substitution C-A STOP_GAINED HET LOC_Os11g15080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN760-S.SNP.11:8487238 chr11:008487238 0 W/8487238-8487238 FN760-S Single Base Substitution T-G INTRON HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN1094-S.SNP.11:8493200 chr11:008493200 0 W/8493200-8493200 FN1094-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g15090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN2375.SNP.11:8493949 chr11:008493949 0 W/8493949-8493949 FN2375 SNP C -> T AC=1;AN=192;BQB=6.43675e-08;DP=4809;DP4=2414,2116,9,27;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00270326;MQB=9.32229e-17;MQSB=0.685072;RPB=1.66603e-08;SGB=-449.632;VDB=0.0795131;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D554|1945|LOC_Os11g15090|protein_coding|CODING|LOC_Os11g15090.1|1|1) FN2114-S.SNP.11:8495781 chr11:008495781 0 W/8495781-8495781 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.9541;DP=3050;DP4=1494,1525,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.116393;MQB=0.974561;MQSB=0.137412;RPB=0.610296;SGB=17.3231;VDB=0.524632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R1074K|1945|LOC_Os11g15090|protein_coding|CODING|LOC_Os11g15090.1|4|1) FN2209-S.SNP.11:8498812 chr11:008498812 0 W/8498812-8498812 FN2209-S SNP C -> T AC=1;AN=190;BQB=0.927874;DP=5128;DP4=2553,2274,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0140406;MQB=4.09944e-07;MQSB=0.00389384;RPB=0.988192;SGB=76.4186;VDB=0.860132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A784T|815|LOC_Os11g15100|protein_coding|CODING|LOC_Os11g15100.1|7|1) FN2715-S.SNP.11:8498812 chr11:008498812 0 W/8498812-8498812 FN2715-S SNP C -> T AC=2;AN=200;BQB=0.400891;DP=4837;DP4=2419,2156,19,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.0111639;MQB=1.82145e-17;MQSB=0.009156;RPB=0.132048;SGB=126.794;VDB=0.654729;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A784T|815|LOC_Os11g15100|protein_coding|CODING|LOC_Os11g15100.1|7|1) FN507-S.SNP.11:8501259 chr11:008501259 0 W/8501259-8501259 FN507-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g15100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-275.SNP.11:8501809 chr11:008501809 0 W/8501809-8501809 FN-275 Single Base Substitution G-A INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1186-S.SNP.11:8506758 chr11:008506758 0 W/8506758-8506758 FN1186-S Single Base Substitution A-T INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN629-S.SNP.11:8507932 chr11:008507932 0 W/8507932-8507932 FN629-S Single Base Substitution G-A INTERGENIC HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2599-S.SNP.11:8512190 chr11:008512190 0 W/8512190-8512190 FN2599-S SNP C -> G AC=1;AN=198;BQB=0.0902661;DP=4763;DP4=2571,1922,9,14;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0837707;MQB=0.930544;MQSB=0;RPB=0.00424791;SGB=-10.2651;VDB=0.0213819;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.11:8514814 chr11:008514814 0 W/8514814-8514814 FN2229-S SNP C -> A AC=1;AN=190;BQB=0.999762;DP=4663;DP4=2059,2275,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.27223e-09;MQSB=0.982929;RPB=0.962705;SGB=46.7622;VDB=0.972614;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S276|600|LOC_Os11g15120|protein_coding|CODING|LOC_Os11g15120.1|2|1) FN630-S.SNP.11:8517558 chr11:008517558 0 W/8517558-8517558 FN630-S Single Base Substitution T-G INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1735-S.SNP.11:8520170 chr11:008520170 0 W/8520170-8520170 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.826939;DP=3663;DP4=1765,1842,14,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.36985e-14;MQSB=0.903957;RPB=0.770175;SGB=-162.829;VDB=0.112111;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.11:8521128 chr11:008521128 0 W/8521128-8521128 FN863-S Single Base Substitution A-G INTERGENIC HOMO SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1363-S.SNP.11:8522325 chr11:008522325 0 W/8522325-8522325 FN1363-S Single Base Substitution C-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2399.SNP.11:8525552 chr11:008525552 0 W/8525552-8525552 FN2399 SNP G -> A AC=1;AN=200;BQB=0.999151;DP=4962;DP4=2480,2109,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27635e-14;MQSB=0.997117;RPB=0.852511;SGB=55.5366;VDB=0.886987;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.11:8528198 chr11:008528198 0 W/8528198-8528198 FN793-S Single Base Substitution G-C INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN-365.SNP.11:8531251 chr11:008531251 0 W/8531251-8531251 FN-365 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g15130 jasmonate O-methyltransferase, putative, expressed SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN-409.SNP.11:8533468 chr11:008533468 0 W/8533468-8533468 FN-409 Single Base Substitution C-T INTERGENIC HET SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN1636-S.SNP.11:8536077 chr11:008536077 0 W/8536077-8536077 FN1636-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g15140 retrotransposon, putative, centromere-specific, expressed SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN1351-S.SNP.11:8538279 chr11:008538279 0 W/8538279-8538279 FN1351-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g15150 retrotransposon, putative, centromere-specific, expressed SNo: 1148, Mutant_ID: FN1351-S, Generation: M2, Mutations: 51, Genes: 24, Seed availability: No. FN1655-S.SNP.11:8538916 chr11:008538916 0 W/8538916-8538916 FN1655-S Single Base Substitution C-G INTRON Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN_776-5-1.SNP.11:8546485 chr11:008546485 0 W/8546485-8546485 FN_776-5-1 Single Base Substitution G-A Homo LOC_Os11g15170 transposon protein, putative, unclassified, expressed SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2562-S.SNP.11:8551222 chr11:008551222 0 W/8551222-8551222 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.990345;DP=3912;DP4=1928,1768,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00460123;MQB=4.08886e-10;MQSB=2.33446e-10;RPB=0.880538;SGB=123.071;VDB=0.531194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C1245Y|1722|LOC_Os11g15170|protein_coding|CODING|LOC_Os11g15170.1|8|1) FN1284-S.SNP.11:8555017 chr11:008555017 0 W/8555017-8555017 FN1284-S Single Base Substitution C-T INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN782-S.SNP.11:8560438 chr11:008560438 0 W/8560438-8560438 FN782-S Single Base Substitution T-C INTERGENIC HET SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN1037-S.SNP.11:8562967 chr11:008562967 0 W/8562967-8562967 FN1037-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g15180 SAM dependent carboxyl methyltransferase, putative, expressed SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN_398-3-4-5.SNP.11:8566338 chr11:008566338 0 W/8566338-8566338 FN_398-3-4-5 Single Base Substitution G-A INTERGENIC HET SNo: 1370, Mutant_ID: FN_398-3-4-5, Generation: M2, Mutations: 38, Genes: 20, Seed availability: No. FN684-S.SNP.11:8567408 chr11:008567408 0 W/8567408-8567408 FN684-S Single Base Substitution G-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN358-S.SNP.11:8573079 chr11:008573079 0 W/8573079-8573079 FN358-S Single Base Substitution G-C INTERGENIC HET SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN450-S.SNP.11:8578616 chr11:008578616 0 W/8578616-8578616 FN450-S Single Base Substitution G-A INTERGENIC HOMO SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN2340.SNP.11:8581014 chr11:008581014 0 W/8581014-8581014 FN2340 SNP T -> C AC=2;AN=192;BQB=0.0159317;DP=4457;DP4=2163,1608,21,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.35451e-24;MQSB=0.980837;RPB=0.409453;SGB=46.4635;VDB=0.77739;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.11:8581575 chr11:008581575 0 W/8581575-8581575 FN2686-S SNP C -> A AC=1;AN=200;BQB=0.0129314;DP=5033;DP4=2411,2305,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000198689;MQB=2.0736e-06;MQSB=0.992356;RPB=0.564812;SGB=19.0642;VDB=0.854919;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.11:8583489 chr11:008583489 0 W/8583489-8583489 W463-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN_N1-151-7.SNP.11:8589748 chr11:008589748 0 W/8589748-8589748 FN_N1-151-7 Single Base Substitution T-C HET LOC_Os11g15220 retrotransposon protein, putative, unclassified, expressed SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2081-S.SNP.11:8604839 chr11:008604839 0 W/8604839-8604839 FN2081-S SNP G -> T AC=1;AN=168;BQB=0.539687;DP=3146;DP4=1581,1517,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.92436e-10;MQSB=0.934418;RPB=0.280635;SGB=8.48315;VDB=0.610368;EFF=INTRON(MODIFIER||||613|LOC_Os11g15240|protein_coding|CODING|LOC_Os11g15240.1|4|1) FN2218-S.SNP.11:8606648 chr11:008606648 0 W/8606648-8606648 FN2218-S SNP G -> A AC=1;AN=190;BQB=0.963262;DP=4674;DP4=2170,2073,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.89837e-10;MQSB=0.975697;RPB=0.993861;SGB=8.77275;VDB=0.593371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1698-S.SNP.11:8609245 chr11:008609245 0 W/8609245-8609245 FN1698-S SNP A -> T AC=1;AN=188;BQB=0.188696;DP=3837;DP4=1996,1810,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.58653e-07;MQSB=0.991402;RPB=0.848417;SGB=23.5329;VDB=0.284054;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.11:8615813 chr11:008615813 0 W/8615813-8615813 FN3852-S SNP C -> T AC=2;AN=158;BQB=0.973316;DP=2350;DP4=1391,838,16,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.15e-14;MQSB=0.71462;RPB=0.875091;SGB=112.609;VDB=0.599308;EFF=INTERGENIC(MODIFIER||||||||||1) FN4114-S.SNP.11:8616727 chr11:008616727 0 W/8616727-8616727 FN4114-S SNP G -> A AC=1;AN=182;BQB=0.848132;DP=2874;DP4=1473,1324,7,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000347947;MQB=3.6236e-09;MQSB=0.920657;RPB=0.91633;SGB=62.1548;VDB=0.200248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.11:8616749 chr11:008616749 0 W/8616749-8616749 FN3826-S SNP G -> A AC=2;AN=190;BQB=0.997077;DP=2630;DP4=1449,1089,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000380228;MQB=3.17928e-12;MQSB=0.62198;RPB=0.570504;SGB=64.5316;VDB=0.486094;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.11:8617088 chr11:008617088 0 W/8617088-8617088 FN2441 SNP C -> T AC=1;AN=198;BQB=0.488546;DP=4078;DP4=1931,1858,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.94878e-08;MQSB=0.884188;RPB=0.248479;SGB=26.8797;VDB=0.195957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.11:8617635 chr11:008617635 0 W/8617635-8617635 FN2468 SNP C -> T AC=1;AN=200;BQB=0.0281841;DP=5607;DP4=3244,2056,11,12;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00303192;MQB=0.0282969;MQSB=0;RPB=0.632215;SGB=-148.085;VDB=0.775563;EFF=INTERGENIC(MODIFIER||||||||||1) FN858-S.SNP.11:8620206 chr11:008620206 0 W/8620206-8620206 FN858-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 764, Mutant_ID: FN858-S, Generation: M2, Mutations: 70, Genes: 53, Seed availability: Yes. W252-6-1.SNP.11:8622870 chr11:008622870 0 W/8622870-8622870 W252-6-1 Single Base Substitution C-T INTERGENIC HET SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN3342-S.SNP.11:8628540 chr11:008628540 0 W/8628540-8628540 FN3342-S SNP A -> C AC=1;AN=184;BQB=0.986975;DP=3109;DP4=1569,1395,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.2281e-11;MQSB=0.84258;RPB=0.517438;SGB=49.835;VDB=0.922411;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.11:8635998 chr11:008635998 0 W/8635998-8635998 FN2661-S SNP G -> A AC=1;AN=200;BQB=0.999832;DP=4970;DP4=2516,2159,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.348e-17;MQSB=0.778392;RPB=0.999548;SGB=23.9365;VDB=0.970959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.11:8642139 chr11:008642139 0 W/8642139-8642139 FN1175-S Single Base Substitution A-T INTRON HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1441-S.SNP.11:8645212 chr11:008645212 0 W/8645212-8645212 FN1441-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2408.SNP.11:8645212 chr11:008645212 0 W/8645212-8645212 FN2408 SNP C -> A AC=1;AN=200;BQB=0.333426;DP=5004;DP4=2442,2262,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.97397e-08;MQSB=0.946989;RPB=0.998915;SGB=49.6594;VDB=0.892694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.11:8645212 chr11:008645212 0 W/8645212-8645212 FN3845-S SNP C -> A AC=1;AN=190;BQB=0.952129;DP=2978;DP4=1613,1206,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.26524e-10;MQSB=0.998466;RPB=0.977122;SGB=62.7569;VDB=0.599011;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.11:8645212 chr11:008645212 0 W/8645212-8645212 FN776-S Single Base Substitution C-A INTERGENIC HOMO SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN840-S.SNP.11:8660121 chr11:008660121 0 W/8660121-8660121 FN840-S Single Base Substitution G-T INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN1506-S.SNP.11:8660674 chr11:008660674 0 W/8660674-8660674 FN1506-S Single Base Substitution C-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN418-S.SNP.11:8667933 chr11:008667933 0 W/8667933-8667933 FN418-S Single Base Substitution G-A INTRON HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1531-S.SNP.11:8676034 chr11:008676034 0 W/8676034-8676034 FN1531-S Single Base Substitution C-T INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1456-S.SNP.11:8679039 chr11:008679039 0 W/8679039-8679039 FN1456-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2161-S.SNP.11:8679484 chr11:008679484 0 W/8679484-8679484 FN2161-S SNP A -> G AC=2;AN=168;BQB=7.30278e-07;DP=4044;DP4=1814,2162,16,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.86555e-12;MQSB=0.999976;RPB=0.935742;SGB=-344.843;VDB=0.866375;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN1233-S Single Base Substitution C-G INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1631-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN1631-S Single Base Substitution C-G INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1754-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN1754-S SNP C -> G AC=1;AN=188;BQB=0.986096;DP=3197;DP4=1440,1722,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.23075e-09;MQSB=0.231523;RPB=0.220478;SGB=8.62479;VDB=0.234842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN2323 SNP C -> G AC=2;AN=192;BQB=0.651861;DP=4448;DP4=2380,1728,35,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.05601e-31;MQSB=0.792654;RPB=0.991779;SGB=180.535;VDB=0.0996824;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN3354-S SNP C -> G AC=2;AN=184;BQB=0.946323;DP=2076;DP4=775,1228,8,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.70218e-09;MQSB=0.0433202;RPB=0.0268156;SGB=89.4385;VDB=0.675311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN3628-S SNP C -> G AC=1;AN=190;BQB=0.889072;DP=1992;DP4=756,1158,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.0065771;MQSB=0.0243622;RPB=0.97542;SGB=21.7749;VDB=0.17309;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN4022-S SNP C -> G AC=2;AN=168;BQB=0.896826;DP=1763;DP4=669,1010,12,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.04073e-12;MQSB=0.00101569;RPB=0.735622;SGB=96.481;VDB=0.4648;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN496-S Single Base Substitution C-G INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN740-S.SNP.11:8688934 chr11:008688934 0 W/8688934-8688934 FN740-S Single Base Substitution C-G INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN4070-S.SNP.11:8690729 chr11:008690729 0 W/8690729-8690729 FN4070-S SNP C -> A AC=2;AN=182;BQB=0.993397;DP=3213;DP4=1480,1628,14,21;HOB=0.0217365;ICB=0.494567;MQ=10;MQ0F=0.339558;MQB=0.00457768;MQSB=0.0155009;RPB=0.124054;SGB=152.372;VDB=0.00380629;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A181E|1110|LOC_Os11g15350|protein_coding|CODING|LOC_Os11g15350.1|1|1) FN_776-5-1.SNP.11:8704581 chr11:008704581 0 W/8704581-8704581 FN_776-5-1 Single Base Substitution T-C Homo SNo: 1481, Mutant_ID: FN_776-5-1, Generation: M3, Mutations: 58, Genes: 19, Seed availability: Yes. FN2194-S.SNP.11:8711621 chr11:008711621 0 W/8711621-8711621 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.674128;DP=2672;DP4=1815,674,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.62117e-09;MQSB=0.879701;RPB=0.967142;SGB=53.8699;VDB=0.985624;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.11:8714558 chr11:008714558 0 W/8714558-8714558 FN1405-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3595-S.SNP.11:8716228 chr11:008716228 0 W/8716228-8716228 FN3595-S SNP G -> C AC=1;AN=190;BQB=0.882243;DP=2488;DP4=1251,1130,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17848e-07;MQSB=0.968034;RPB=0.10747;SGB=44.5415;VDB=0.227606;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.11:8718016 chr11:008718016 0 W/8718016-8718016 FN3521-S SNP A -> G AC=1;AN=188;BQB=0.968279;DP=3044;DP4=1659,1292,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.13612e-09;MQSB=0.970011;RPB=0.913176;SGB=62.6088;VDB=0.104067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.11:8726651 chr11:008726651 0 W/8726651-8726651 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.215043;DP=4160;DP4=2135,1991,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.36609e-08;MQSB=0.99973;RPB=0.723329;SGB=-37.7974;VDB=0.405934;EFF=INTRON(MODIFIER||||1170|LOC_Os11g15400|protein_coding|CODING|LOC_Os11g15400.1|2|1) FN2150-S.SNP.11:8728614 chr11:008728614 0 W/8728614-8728614 FN2150-S SNP C -> T AC=1;AN=168;BQB=0.00933092;DP=3456;DP4=2182,1235,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.15326e-09;MQSB=0.893611;RPB=0.0830787;SGB=-68.0681;VDB=0.251951;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.11:8734126 chr11:008734126 0 W/8734126-8734126 FN2200-S SNP T -> C AC=2;AN=190;BQB=0.736963;DP=4941;DP4=2288,2326,22,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.98653e-20;MQSB=0.99864;RPB=0.754974;SGB=84.9528;VDB=0.393039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.11:8734535 chr11:008734535 0 W/8734535-8734535 FN3743-S SNP G -> A AC=1;AN=190;BQB=0.96015;DP=2930;DP4=1416,1409,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.07958e-06;MQSB=0.963636;RPB=0.475815;SGB=49.0954;VDB=0.773123;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.11:8735013 chr11:008735013 0 W/8735013-8735013 FN1270-S Single Base Substitution A-G INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2780-S.SNP.11:8739896 chr11:008739896 0 W/8739896-8739896 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.97725;DP=3933;DP4=1793,1926,12,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.96734e-16;MQSB=0.996728;RPB=0.63278;SGB=90.4807;VDB=0.87461;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.11:8752101 chr11:008752101 0 W/8752101-8752101 FN926-S Single Base Substitution G-A INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1015-S.SNP.11:8755327 chr11:008755327 0 W/8755327-8755327 FN1015-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN2331.SNP.11:8756094 chr11:008756094 0 W/8756094-8756094 FN2331 SNP G -> A AC=1;AN=192;BQB=0.104361;DP=4856;DP4=2312,2205,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.94163e-06;MQSB=0.916992;RPB=0.960668;SGB=-36.1991;VDB=0.234292;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R973Q|977|LOC_Os11g15440|protein_coding|CODING|LOC_Os11g15440.1|5|1) FN1451-S.SNP.11:8759942 chr11:008759942 0 W/8759942-8759942 FN1451-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g15450 retrotransposon protein, putative, unclassified SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN1284-S.SNP.11:8764375 chr11:008764375 0 W/8764375-8764375 FN1284-S Single Base Substitution G-A INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3956-S.SNP.11:8764375 chr11:008764375 0 W/8764375-8764375 FN3956-S SNP G -> A AC=1;AN=168;BQB=0.999994;DP=2224;DP4=891,1182,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.022482;MQB=0.779177;MQSB=0.0196594;RPB=0.555748;SGB=31.3172;VDB=0.840151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.11:8766256 chr11:008766256 0 W/8766256-8766256 FN1204-S Single Base Substitution C-G INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN3386-S.SNP.11:8777214 chr11:008777214 0 W/8777214-8777214 FN3386-S SNP T -> A AC=1;AN=184;BQB=0.891693;DP=2908;DP4=1385,1423,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.99704e-10;MQSB=0.973491;RPB=0.998142;SGB=62.3078;VDB=0.515242;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E48V|110|LOC_Os11g15490|protein_coding|CODING|LOC_Os11g15490.1|1|1) FN3386-S.SNP.11:8777215 chr11:008777215 0 W/8777215-8777215 FN3386-S SNP C -> A AC=1;AN=184;BQB=0.8134;DP=2913;DP4=1409,1417,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.72638e-09;MQSB=0.998082;RPB=0.996892;SGB=57.786;VDB=0.650373;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E48*|110|LOC_Os11g15490|protein_coding|CODING|LOC_Os11g15490.1|1|1);LOF=(LOC_Os11g15490|LOC_Os11g15490|1|1.00);NMD=(LOC_Os11g15490|LOC_Os11g15490|1|1.00) FN3670-S.SNP.11:8781431 chr11:008781431 0 W/8781431-8781431 FN3670-S SNP T -> G AC=1;AN=190;BQB=0.98623;DP=3068;DP4=1492,1441,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.70634e-08;MQSB=0.787066;RPB=0.871298;SGB=32.5467;VDB=0.341043;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cGt|L432R|939|LOC_Os11g15500|protein_coding|CODING|LOC_Os11g15500.1|2|1) FN2661-S.SNP.11:8783850 chr11:008783850 0 W/8783850-8783850 FN2661-S SNP A -> C AC=1;AN=200;BQB=0.916829;DP=4590;DP4=2210,2106,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0917e-12;MQSB=0.996383;RPB=0.586477;SGB=100.316;VDB=0.533313;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.11:8785743 chr11:008785743 0 W/8785743-8785743 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.986398;DP=4740;DP4=2204,2207,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.89847e-15;MQSB=0.886575;RPB=0.781732;SGB=-39.2639;VDB=0.694469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Gcc|T108A|547|LOC_Os11g15510|protein_coding|CODING|LOC_Os11g15510.1|1|1) FN3715-S.SNP.11:8787501 chr11:008787501 0 W/8787501-8787501 FN3715-S SNP A -> C AC=1;AN=190;BQB=0.999487;DP=2938;DP4=1457,1314,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.35136e-10;MQSB=0.980973;RPB=0.932402;SGB=85.5263;VDB=0.246836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2300.SNP.11:8789056 chr11:008789056 0 W/8789056-8789056 FN2300 SNP T -> C AC=1;AN=192;BQB=0.674637;DP=5016;DP4=2142,2431,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.39363e-12;MQSB=0.683696;RPB=0.935774;SGB=-40.12;VDB=0.503399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.11:8789587 chr11:008789587 0 W/8789587-8789587 FN1346-S Single Base Substitution T-A INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1623-S.SNP.11:8794086 chr11:008794086 0 W/8794086-8794086 FN1623-S Single Base Substitution G-C INTRON HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2122-S.SNP.11:8796402 chr11:008796402 0 W/8796402-8796402 FN2122-S SNP G -> T AC=2;AN=168;BQB=0.535819;DP=3301;DP4=1272,1961,15,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.46201e-23;MQSB=0.982467;RPB=0.995663;SGB=-194.301;VDB=0.897911;EFF=INTRON(MODIFIER||||736|LOC_Os11g15520|protein_coding|CODING|LOC_Os11g15520.1|3|1) FN2122-S.SNP.11:8796403 chr11:008796403 0 W/8796403-8796403 FN2122-S SNP G -> T AC=2;AN=168;BQB=0.821334;DP=3293;DP4=1265,1959,13,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.41359e-20;MQSB=0.98772;RPB=0.705032;SGB=-50.3194;VDB=0.5;EFF=INTRON(MODIFIER||||736|LOC_Os11g15520|protein_coding|CODING|LOC_Os11g15520.1|3|1) FN2594-S.SNP.11:8796968 chr11:008796968 0 W/8796968-8796968 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.829495;DP=4163;DP4=1892,2074,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.51632e-06;MQSB=0.963111;RPB=0.993187;SGB=16.3688;VDB=0.840969;EFF=INTRON(MODIFIER||||736|LOC_Os11g15520|protein_coding|CODING|LOC_Os11g15520.1|3|1) FN3721-S.SNP.11:8797518 chr11:008797518 0 W/8797518-8797518 FN3721-S SNP T -> C AC=2;AN=190;BQB=0.548699;DP=2608;DP4=1464,1021,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.076e-10;MQSB=0.0475082;RPB=0.673047;SGB=41.5369;VDB=0.918443;EFF=INTRON(MODIFIER||||736|LOC_Os11g15520|protein_coding|CODING|LOC_Os11g15520.1|3|1) FN3757-S.SNP.11:8801384 chr11:008801384 0 W/8801384-8801384 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.723919;DP=2235;DP4=982,1141,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.673e-06;MQSB=0.999081;RPB=0.883939;SGB=28.9929;VDB=0.864626;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.11:8802019 chr11:008802019 0 W/8802019-8802019 FN2315 SNP G -> A AC=1;AN=192;BQB=0.701367;DP=4516;DP4=2268,2010,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.12624e-11;MQSB=0.955039;RPB=0.0909292;SGB=68.2948;VDB=0.318431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.11:8804611 chr11:008804611 0 W/8804611-8804611 FN2121-S SNP A -> G AC=2;AN=168;BQB=0.079902;DP=4618;DP4=2188,2351,34,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.99519e-36;MQSB=0.968418;RPB=0.775309;SGB=-66.2565;VDB=0.0101119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.11:8805080 chr11:008805080 0 W/8805080-8805080 FN2495 SNP C -> T AC=2;AN=200;BQB=0.428563;DP=4567;DP4=2214,2110,26,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.35634e-23;MQSB=0.967737;RPB=0.484976;SGB=183.209;VDB=0.340644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R31C|186|LOC_Os11g15540|protein_coding|CODING|LOC_Os11g15540.1|1|1) FN2450.SNP.11:8806297 chr11:008806297 0 W/8806297-8806297 FN2450 SNP G -> C AC=1;AN=200;BQB=0.144495;DP=5192;DP4=2136,2704,6,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.8211e-11;MQSB=0.572682;RPB=0.573871;SGB=-10.6896;VDB=0.440576;EFF=INTRON(MODIFIER||||186|LOC_Os11g15540|protein_coding|CODING|LOC_Os11g15540.1|1|1) FN2598-S.SNP.11:8807564 chr11:008807564 0 W/8807564-8807564 FN2598-S SNP G -> A AC=1;AN=198;BQB=0.836284;DP=4266;DP4=2050,1926,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.94384e-11;MQSB=0.999476;RPB=0.828347;SGB=61.7198;VDB=0.622147;EFF=INTRON(MODIFIER||||186|LOC_Os11g15540|protein_coding|CODING|LOC_Os11g15540.1|2|1) FN3980-S.SNP.11:8813776 chr11:008813776 0 W/8813776-8813776 FN3980-S SNP T -> C AC=1;AN=168;BQB=0.997562;DP=2652;DP4=1224,1260,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00226244;MQB=2.36393e-05;MQSB=0.687138;RPB=0.936518;SGB=-1.53256;VDB=0.261515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I495T|1686|LOC_Os11g15560|protein_coding|CODING|LOC_Os11g15560.1|4|1) FN2304.SNP.11:8817025 chr11:008817025 0 W/8817025-8817025 FN2304 SNP C -> T AC=1;AN=192;BQB=0.424533;DP=4720;DP4=2168,2237,12,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000211864;MQB=2.67437e-17;MQSB=0.871613;RPB=0.837686;SGB=149.626;VDB=0.809115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A1556V|1686|LOC_Os11g15560|protein_coding|CODING|LOC_Os11g15560.1|5|1) FN4109-S.SNP.11:8818695 chr11:008818695 0 W/8818695-8818695 FN4109-S SNP G -> T AC=1;AN=182;BQB=0.894629;DP=3014;DP4=1547,1384,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=36;MQ0F=0.0431321;MQB=0.993963;MQSB=5.24135e-40;RPB=0.942444;SGB=39.6007;VDB=0.668972;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.11:8821862 chr11:008821862 0 W/8821862-8821862 FN2583-S SNP C -> G AC=1;AN=200;BQB=0.145861;DP=4807;DP4=2307,2204,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.31483e-12;MQSB=0.885266;RPB=0.992089;SGB=81.8956;VDB=0.659235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-76.SNP.11:8823172 chr11:008823172 0 W/8823172-8823172 FN-76 Single Base Substitution C-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2360.SNP.11:8825690 chr11:008825690 0 W/8825690-8825690 FN2360 SNP G -> A AC=1;AN=192;BQB=0.127254;DP=4569;DP4=2202,2136,4,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.22069e-08;MQSB=0.999958;RPB=0.925546;SGB=18.6565;VDB=0.565572;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.11:8829629 chr11:008829629 0 W/8829629-8829629 FN3435-S SNP C -> T AC=1;AN=184;BQB=0.998533;DP=2479;DP4=1226,1166,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.01234e-06;MQSB=0.913676;RPB=0.991854;SGB=35.1773;VDB=0.202829;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.11:8839704 chr11:008839704 0 W/8839704-8839704 FN4143-S SNP G -> T AC=1;AN=170;BQB=0.979869;DP=2376;DP4=1239,1064,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.65747e-06;MQSB=0.683622;RPB=0.756187;SGB=38.987;VDB=0.577201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S229Y|251|LOC_Os11g15590|protein_coding|CODING|LOC_Os11g15590.1|5|1) FN506-S.SNP.11:8846404 chr11:008846404 0 W/8846404-8846404 FN506-S Single Base Substitution C-A INTERGENIC HOMO SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN1108-S.SNP.11:8849387 chr11:008849387 0 W/8849387-8849387 FN1108-S Single Base Substitution T-C INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN302-S.SNP.11:8857030 chr11:008857030 0 W/8857030-8857030 FN302-S Single Base Substitution G-A INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN2731-S.SNP.11:8857914 chr11:008857914 0 W/8857914-8857914 FN2731-S SNP G -> T AC=1;AN=200;BQB=0.89751;DP=3946;DP4=2336,1294,9,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00278763;MQB=2.65489e-06;MQSB=7.53407e-35;RPB=0.787227;SGB=63.4749;VDB=0.56357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Agc|R98S|140|LOC_Os11g15610|protein_coding|CODING|LOC_Os11g15610.1|3|1) FN2619-S.SNP.11:8865131 chr11:008865131 0 W/8865131-8865131 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.295115;DP=4390;DP4=1860,2284,17,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.34403e-22;MQSB=0.89558;RPB=0.990495;SGB=137.217;VDB=0.108308;EFF=INTRON(MODIFIER||||129|LOC_Os11g15624|protein_coding|CODING|LOC_Os11g15624.1|2|1),INTRON(MODIFIER||||76|LOC_Os11g15624|protein_coding|CODING|LOC_Os11g15624.2|2|1),INTRON(MODIFIER||||100|LOC_Os11g15624|protein_coding|CODING|LOC_Os11g15624.3|1|1) FN-51.SNP.11:8865337 chr11:008865337 0 W/8865337-8865337 FN-51 Single Base Substitution C-T INTRON HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.11:8865337 chr11:008865337 0 W/8865337-8865337 FN-51 Single Base Substitution C-T INTRON Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-185.SNP.11:8866668 chr11:008866668 0 W/8866668-8866668 FN-185 Single Base Substitution G-A INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN-185.SNP.11:8866669 chr11:008866669 0 W/8866669-8866669 FN-185 Single Base Substitution T-A INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2260-S.SNP.11:8869768 chr11:008869768 0 W/8869768-8869768 FN2260-S SNP T -> A AC=1;AN=190;BQB=0.734859;DP=4973;DP4=2136,2452,24,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000402172;MQB=4.71045e-24;MQSB=0.059947;RPB=0.999638;SGB=-49.262;VDB=0.342416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D172V|255|LOC_Os11g15630|protein_coding|CODING|LOC_Os11g15630.1|3|1) FN3751-S.SNP.11:8871273 chr11:008871273 0 W/8871273-8871273 FN3751-S SNP T -> C AC=1;AN=190;BQB=0.989366;DP=2901;DP4=1578,1213,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000344709;MQB=3.78299e-06;MQSB=0.00502568;RPB=0.893359;SGB=58.2031;VDB=0.507997;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.11:8881249 chr11:008881249 0 W/8881249-8881249 FN470-S Single Base Substitution C-T INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN470-S.SNP.11:8881250 chr11:008881250 0 W/8881250-8881250 FN470-S Single Base Substitution C-T INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1372-S.SNP.11:8884583 chr11:008884583 0 W/8884583-8884583 FN1372-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g15670 NBS-LRR disease resistance protein, putative, expressed SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2317.SNP.11:8885993 chr11:008885993 0 W/8885993-8885993 FN2317 SNP A -> G AC=1;AN=192;BQB=0.81198;DP=5523;DP4=2741,2484,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74225e-10;MQSB=0.98169;RPB=0.409524;SGB=13.6122;VDB=0.0461457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.11:8886280 chr11:008886280 0 W/8886280-8886280 FN3780-S SNP T -> A AC=2;AN=190;BQB=0.932909;DP=2484;DP4=918,1462,6,20;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.81369e-13;MQSB=0.0216436;RPB=0.994822;SGB=112.85;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.11:8892375 chr11:008892375 0 W/8892375-8892375 FN810-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g15690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2768-S.SNP.11:8892783 chr11:008892783 0 W/8892783-8892783 FN2768-S SNP T -> A AC=1;AN=198;BQB=0.273273;DP=4728;DP4=2408,2084,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0604907;MQB=0.00136387;MQSB=1.92491e-12;RPB=0.999674;SGB=63.3342;VDB=0.964328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S659T|1337|LOC_Os11g15690|protein_coding|CODING|LOC_Os11g15690.1|1|1) FN919-S.SNP.11:8896185 chr11:008896185 0 W/8896185-8896185 FN919-S Single Base Substitution C-T INTERGENIC HOMO SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN-363.SNP.11:8896338 chr11:008896338 0 W/8896338-8896338 FN-363 Single Base Substitution T-A INTERGENIC HOMO SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-272.SNP.11:8901336 chr11:008901336 0 W/8901336-8901336 FN-272 Single Base Substitution G-A INTERGENIC HOMO SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3796-S.SNP.11:8906368 chr11:008906368 0 W/8906368-8906368 FN3796-S SNP T -> A AC=2;AN=190;BQB=0.977065;DP=3152;DP4=1594,1419,13,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.84856e-17;MQSB=0.767214;RPB=0.991882;SGB=59.414;VDB=0.0888813;EFF=UTR_5_PRIME(MODIFIER||200||97|LOC_Os11g15720|protein_coding|CODING|LOC_Os11g15720.1|1|1) FN3796-S.SNP.11:8906369 chr11:008906369 0 W/8906369-8906369 FN3796-S SNP C -> G AC=2;AN=190;BQB=0.886872;DP=3153;DP4=1631,1422,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.503e-18;MQSB=0.763777;RPB=0.995035;SGB=121.957;VDB=0.0689427;EFF=START_GAINED(LOW||||97|LOC_Os11g15720|protein_coding|CODING|LOC_Os11g15720.1|1|1),UTR_5_PRIME(MODIFIER||199||97|LOC_Os11g15720|protein_coding|CODING|LOC_Os11g15720.1|1|1) FN3796-S.SNP.11:8906371 chr11:008906371 0 W/8906371-8906371 FN3796-S SNP G -> A AC=2;AN=190;BQB=0.888261;DP=3199;DP4=1634,1458,12,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35844e-17;MQSB=0.7576;RPB=0.998521;SGB=117.403;VDB=0.0825329;EFF=UTR_5_PRIME(MODIFIER||197||97|LOC_Os11g15720|protein_coding|CODING|LOC_Os11g15720.1|1|1) FN-166.SNP.11:8922571 chr11:008922571 0 W/8922571-8922571 FN-166 Single Base Substitution G-A INTRON HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2323.SNP.11:8924354 chr11:008924354 0 W/8924354-8924354 FN2323 SNP C -> T AC=1;AN=192;BQB=0.466528;DP=3203;DP4=1004,2021,8,16;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=4.57874e-12;MQSB=3.93146e-05;RPB=0.910241;SGB=75.4235;VDB=0.0985667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1085-S.SNP.11:8927668 chr11:008927668 0 W/8927668-8927668 FN1085-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN-180.SNP.11:8928074 chr11:008928074 0 W/8928074-8928074 FN-180 Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3457-S.SNP.11:8931107 chr11:008931107 0 W/8931107-8931107 FN3457-S SNP G -> A AC=1;AN=184;BQB=0.976651;DP=2996;DP4=1399,1518,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.84658e-07;MQSB=0.909364;RPB=0.180236;SGB=48.7425;VDB=0.712442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S184N|231|LOC_Os11g16246|protein_coding|CODING|LOC_Os11g16246.1|3|1) FN2301.SNP.11:8935597 chr11:008935597 0 W/8935597-8935597 FN2301 SNP C -> T AC=1;AN=192;BQB=0.94377;DP=5231;DP4=2457,2463,11,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000191168;MQB=5.40902e-12;MQSB=0.951056;RPB=0.986872;SGB=57.6018;VDB=0.230247;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.11:8937944 chr11:008937944 0 W/8937944-8937944 FN752-S Single Base Substitution G-A INTERGENIC HOMO SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN3637-S.SNP.11:8939276 chr11:008939276 0 W/8939276-8939276 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.88728;DP=2821;DP4=1335,1372,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.33078e-11;MQSB=0.916358;RPB=0.603185;SGB=50.3161;VDB=0.131671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F295S|544|LOC_Os11g16248|protein_coding|CODING|LOC_Os11g16248.1|4|1) FN1356-S.SNP.11:8940005 chr11:008940005 0 W/8940005-8940005 FN1356-S Single Base Substitution G-C INTRON HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN_552-1-1.SNP.11:8948006 chr11:008948006 0 W/8948006-8948006 FN_552-1-1 Single Base Substitution A-G HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN507-S.SNP.11:8949681 chr11:008949681 0 W/8949681-8949681 FN507-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN-51.SNP.11:8955488 chr11:008955488 0 W/8955488-8955488 FN-51 Single Base Substitution C-A INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.11:8955488 chr11:008955488 0 W/8955488-8955488 FN-51 Single Base Substitution C-A INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-289.SNP.11:8957979 chr11:008957979 0 W/8957979-8957979 FN-289 Single Base Substitution T-C INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN3923-S.SNP.11:8962997 chr11:008962997 0 W/8962997-8962997 FN3923-S SNP G -> A AC=1;AN=158;BQB=0.973648;DP=2034;DP4=999,950,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.96853e-07;MQSB=0.996695;RPB=0.44034;SGB=51.4366;VDB=0.151085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.11:8964784 chr11:008964784 0 W/8964784-8964784 FN2652-S SNP C -> A AC=1;AN=200;BQB=0.855951;DP=5018;DP4=2619,2157,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.65716e-12;MQSB=0.999921;RPB=0.846645;SGB=91.1059;VDB=0.68083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.11:8964811 chr11:008964811 0 W/8964811-8964811 FN2408 SNP C -> T AC=1;AN=200;BQB=0.743843;DP=4846;DP4=2558,2016,11,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.13667e-12;MQSB=0.908144;RPB=0.562914;SGB=-9.47921;VDB=0.445445;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.11:8964972 chr11:008964972 0 W/8964972-8964972 FN-212 Single Base Substitution G-A INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1525-S.SNP.11:8965395 chr11:008965395 0 W/8965395-8965395 FN1525-S Single Base Substitution G-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2631-S.SNP.11:8977722 chr11:008977722 0 W/8977722-8977722 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.330336;DP=4367;DP4=2350,1802,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.26699e-10;MQSB=0.985258;RPB=0.701874;SGB=63.4749;VDB=0.96082;EFF=INTRON(MODIFIER||||165|LOC_Os11g16300|protein_coding|CODING|LOC_Os11g16300.1|1|1) FN4072-S.SNP.11:8977763 chr11:008977763 0 W/8977763-8977763 FN4072-S SNP T -> A AC=2;AN=182;BQB=0.993577;DP=2523;DP4=1362,1089,9,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.22413e-14;MQSB=0.908002;RPB=0.466707;SGB=102.753;VDB=0.328243;EFF=INTRON(MODIFIER||||165|LOC_Os11g16300|protein_coding|CODING|LOC_Os11g16300.1|1|1) FN4072-S.SNP.11:8979581 chr11:008979581 0 W/8979581-8979581 FN4072-S SNP C -> T AC=2;AN=182;BQB=0.896073;DP=3091;DP4=1567,1431,12,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.12369e-14;MQSB=0.915335;RPB=0.918947;SGB=74.2472;VDB=0.00814669;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.11:8980135 chr11:008980135 0 W/8980135-8980135 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.979106;DP=2344;DP4=1187,1081,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.34856e-05;MQSB=0.835406;RPB=0.791961;SGB=38.987;VDB=0.781995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.11:8982840 chr11:008982840 0 W/8982840-8982840 FN1330-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN4068-S.SNP.11:8987423 chr11:008987423 0 W/8987423-8987423 FN4068-S SNP C -> T AC=1;AN=182;BQB=0.994116;DP=2548;DP4=1127,1338,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.58514e-07;MQSB=0.997839;RPB=0.985272;SGB=39.6007;VDB=0.294276;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.11:8991638 chr11:008991638 0 W/8991638-8991638 FN2566-S SNP A -> T AC=1;AN=198;BQB=0.588706;DP=4540;DP4=2103,2180,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.99483e-10;MQSB=0.716944;RPB=0.948312;SGB=-15.026;VDB=0.799082;EFF=INTRON(MODIFIER||||560|LOC_Os11g16310|protein_coding|CODING|LOC_Os11g16310.1|2|1) FN3342-S.SNP.11:8993735 chr11:008993735 0 W/8993735-8993735 FN3342-S SNP G -> T AC=1;AN=184;BQB=0.0243599;DP=3203;DP4=1037,1962,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000312207;MQB=5.07016e-07;MQSB=0.905911;RPB=0.970697;SGB=-16.2794;VDB=0.538544;EFF=INTRON(MODIFIER||||560|LOC_Os11g16310|protein_coding|CODING|LOC_Os11g16310.1|9|1) FN3342-S.SNP.11:8993736 chr11:008993736 0 W/8993736-8993736 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.886786;DP=3205;DP4=1048,2023,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31463e-10;MQSB=0.945713;RPB=0.999957;SGB=3.75875;VDB=0.832112;EFF=INTRON(MODIFIER||||560|LOC_Os11g16310|protein_coding|CODING|LOC_Os11g16310.1|9|1) FN3535-S.SNP.11:8994086 chr11:008994086 0 W/8994086-8994086 FN3535-S SNP C -> T AC=1;AN=188;BQB=0.989623;DP=2785;DP4=1440,1251,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000359066;MQB=2.57244e-06;MQSB=8.18296e-08;RPB=0.415593;SGB=39.5276;VDB=0.0438724;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L419|560|LOC_Os11g16310|protein_coding|CODING|LOC_Os11g16310.1|10|1) FN2380.SNP.11:9000237 chr11:009000237 0 W/9000237-9000237 FN2380 SNP A -> T AC=2;AN=192;BQB=0.331197;DP=4946;DP4=2074,2429,23,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000202184;MQB=3.67658e-17;MQSB=0.0674314;RPB=0.979714;SGB=-182.896;VDB=0.129911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2115-S.SNP.11:9007586 chr11:009007586 0 W/9007586-9007586 FN2115-S SNP A -> G AC=2;AN=168;BQB=0.519246;DP=3574;DP4=1850,1665,21,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.53612e-17;MQSB=0.935094;RPB=0.79569;SGB=-6.32537;VDB=0.718543;EFF=INTRON(MODIFIER||||442|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.1|2|1),INTRON(MODIFIER||||417|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.2|2|1),INTRON(MODIFIER||||309|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.4|2|1) FN3796-S.SNP.11:9008057 chr11:009008057 0 W/9008057-9008057 FN3796-S SNP T -> C AC=2;AN=190;BQB=0.864477;DP=2656;DP4=1396,1171,5,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.22233e-12;MQSB=0.979873;RPB=0.596362;SGB=80.9724;VDB=0.295543;EFF=INTRON(MODIFIER||||442|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.1|2|1),INTRON(MODIFIER||||417|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.2|2|1),INTRON(MODIFIER||||309|LOC_Os11g16330|protein_coding|CODING|LOC_Os11g16330.4|2|1) FN2268-S.SNP.11:9016760 chr11:009016760 0 W/9016760-9016760 FN2268-S SNP C -> T AC=1;AN=190;BQB=0.777823;DP=5216;DP4=2372,2414,15,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.25484e-18;MQSB=0.993723;RPB=0.915059;SGB=121.394;VDB=0.594848;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.11:9017188 chr11:009017188 0 W/9017188-9017188 FN-150 Single Base Substitution G-A INTERGENIC HET SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN571-S.SNP.11:9018913 chr11:009018913 0 W/9018913-9018913 FN571-S Single Base Substitution C-A INTRON HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2532-S.SNP.11:9029660 chr11:009029660 0 W/9029660-9029660 FN2532-S SNP G -> A AC=1;AN=198;BQB=0.99017;DP=4350;DP4=2088,2006,8,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.02407e-11;MQSB=0.724434;RPB=0.600713;SGB=44.9151;VDB=0.251541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.11:9033780 chr11:009033780 0 W/9033780-9033780 FN3764-S SNP G -> T AC=1;AN=190;BQB=0.92833;DP=2959;DP4=956,1869,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.97325e-08;MQSB=0.999822;RPB=0.999528;SGB=15.9981;VDB=0.963006;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.11:9034685 chr11:009034685 0 W/9034685-9034685 FN-235 Single Base Substitution A-T INTRON HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1759-S.SNP.11:9040952 chr11:009040952 0 W/9040952-9040952 FN1759-S SNP G -> A AC=1;AN=188;BQB=0.756754;DP=3456;DP4=1804,1620,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.85579e-13;MQSB=0.831127;RPB=0.570151;SGB=14.798;VDB=0.465019;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R386|491|LOC_Os11g16370|protein_coding|CODING|LOC_Os11g16370.1|13|1) FN3375-S.SNP.11:9043034 chr11:009043034 0 W/9043034-9043034 FN3375-S SNP A -> G AC=1;AN=184;BQB=0.641631;DP=2589;DP4=1160,1377,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.08292e-06;MQSB=0.783531;RPB=0.884011;SGB=25.1826;VDB=0.635404;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.11:9043345 chr11:009043345 0 W/9043345-9043345 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.575991;DP=4673;DP4=2240,2212,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.2378e-12;MQSB=0.989184;RPB=0.660012;SGB=65.5058;VDB=0.140406;EFF=INTERGENIC(MODIFIER||||||||||1) FN465-S.SNP.11:9044364 chr11:009044364 0 W/9044364-9044364 FN465-S Single Base Substitution G-A INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN928-S.SNP.11:9046155 chr11:009046155 0 W/9046155-9046155 FN928-S Single Base Substitution C-A INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2598-S.SNP.11:9047249 chr11:009047249 0 W/9047249-9047249 FN2598-S SNP G -> C AC=1;AN=198;BQB=0.94648;DP=4181;DP4=1912,2025,12,16;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00191342;MQB=4.78419e-12;MQSB=0.045011;RPB=0.849416;SGB=90.4807;VDB=0.880754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.11:9047887 chr11:009047887 0 W/9047887-9047887 FN1561-S Single Base Substitution C-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1701-S.SNP.11:9051547 chr11:009051547 0 W/9051547-9051547 FN1701-S SNP A -> G AC=1;AN=188;BQB=0.490756;DP=4154;DP4=2007,2125,5,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00144439;MQB=8.93203e-06;MQSB=0.985535;RPB=0.922927;SGB=31.1628;VDB=0.986328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2130-S.SNP.11:9052185 chr11:009052185 0 W/9052185-9052185 FN2130-S SNP T -> C AC=2;AN=168;BQB=0.328007;DP=3737;DP4=1681,1992,28,24;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.000267594;MQB=3.10506e-13;MQSB=0.0559474;RPB=0.999552;SGB=-226.424;VDB=0.454061;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.11:9056769 chr11:009056769 0 W/9056769-9056769 FN2298 SNP C -> T AC=2;AN=192;BQB=0.225913;DP=5062;DP4=2321,2384,26,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.01132e-29;MQSB=0.953655;RPB=0.37809;SGB=7.80525;VDB=0.996013;EFF=INTRON(MODIFIER||||457|LOC_Os11g16390|protein_coding|CODING|LOC_Os11g16390.1|2|1),INTRON(MODIFIER||||425|LOC_Os11g16390|protein_coding|CODING|LOC_Os11g16390.2|3|1),INTRON(MODIFIER||||421|LOC_Os11g16390|protein_coding|CODING|LOC_Os11g16390.3|2|1) FN-232.SNP.11:9062916 chr11:009062916 0 W/9062916-9062916 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2638-S.SNP.11:9064129 chr11:009064129 0 W/9064129-9064129 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.655801;DP=5020;DP4=2278,2418,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.89082e-07;MQSB=0.24869;RPB=0.29441;SGB=1.46408;VDB=0.704797;EFF=INTERGENIC(MODIFIER||||||||||1) FN-127.SNP.11:9064583 chr11:009064583 0 W/9064583-9064583 FN-127 Single Base Substitution G-A INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-127.SNP.11:9064584 chr11:009064584 0 W/9064584-9064584 FN-127 Single Base Substitution G-A INTERGENIC HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2361.SNP.11:9065086 chr11:009065086 0 W/9065086-9065086 FN2361 SNP A -> T AC=2;AN=192;BQB=0.987353;DP=4404;DP4=2109,1810,35,24;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=8.41396e-27;MQSB=1.69584e-05;RPB=0.602865;SGB=263.735;VDB=0.848007;EFF=INTERGENIC(MODIFIER||||||||||1) FN-375.SNP.11:9070217 chr11:009070217 0 W/9070217-9070217 FN-375 Single Base Substitution G-A INTERGENIC HET SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN3978-S.SNP.11:9070568 chr11:009070568 0 W/9070568-9070568 FN3978-S SNP C -> T AC=1;AN=168;BQB=0.842617;DP=2547;DP4=1158,1285,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.03715e-08;MQSB=0.91591;RPB=0.968574;SGB=31.3172;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.11:9071573 chr11:009071573 0 W/9071573-9071573 FN2260-S SNP C -> G AC=1;AN=190;BQB=0.203815;DP=4634;DP4=2161,2057,17,26;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.75613e-23;MQSB=0.966597;RPB=0.971254;SGB=0.0710663;VDB=0.606672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.11:9074007 chr11:009074007 0 W/9074007-9074007 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.627775;DP=2863;DP4=1304,1410,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62166e-07;MQSB=0.181185;RPB=0.250402;SGB=25.7969;VDB=0.905522;EFF=INTRON(MODIFIER||||328|LOC_Os11g16410|protein_coding|CODING|LOC_Os11g16410.1|1|1),INTRON(MODIFIER||||258|LOC_Os11g16410|protein_coding|CODING|LOC_Os11g16410.3|1|1),INTRON(MODIFIER||||207|LOC_Os11g16410|protein_coding|CODING|LOC_Os11g16410.4|1|1),INTRON(MODIFIER||||294|LOC_Os11g16410|protein_coding|CODING|LOC_Os11g16410.5|1|1) FN1176-S.SNP.11:9079983 chr11:009079983 0 W/9079983-9079983 FN1176-S Single Base Substitution G-A INTRON HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1596-S.SNP.11:9085721 chr11:009085721 0 W/9085721-9085721 FN1596-S Single Base Substitution C-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN3658-S.SNP.11:9086220 chr11:009086220 0 W/9086220-9086220 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.685211;DP=3034;DP4=1353,1530,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.48433e-06;MQSB=0.986981;RPB=0.318693;SGB=36.1006;VDB=0.217929;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.11:9091008 chr11:009091008 0 W/9091008-9091008 FN462-S Single Base Substitution T-A INTRON HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN-94.SNP.11:9091954 chr11:009091954 0 W/9091954-9091954 FN-94 Single Base Substitution T-A INTRON HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-94.SNP.11:9091976 chr11:009091976 0 W/9091976-9091976 FN-94 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN2081-S.SNP.11:9095336 chr11:009095336 0 W/9095336-9095336 FN2081-S SNP A -> C AC=1;AN=168;BQB=0.0687423;DP=3099;DP4=1861,1198,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.19754e-05;MQSB=0.999856;RPB=0.681979;SGB=-92.9238;VDB=0.972254;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.11:9101938 chr11:009101938 0 W/9101938-9101938 FN-262 Single Base Substitution G-A INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN1492-S.SNP.11:9108404 chr11:009108404 0 W/9108404-9108404 FN1492-S Single Base Substitution C-T INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN1085-S.SNP.11:9115770 chr11:009115770 0 W/9115770-9115770 FN1085-S Single Base Substitution G-A INTRON HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2359.SNP.11:9121740 chr11:009121740 0 W/9121740-9121740 FN2359 SNP C -> T AC=2;AN=192;BQB=0.945564;DP=4980;DP4=2345,2355,19,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.00912e-22;MQSB=0.998318;RPB=0.922926;SGB=41.7705;VDB=0.915315;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.11:9126221 chr11:009126221 0 W/9126221-9126221 FN462-S Single Base Substitution A-T INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2199-S.SNP.11:9130823 chr11:009130823 0 W/9130823-9130823 FN2199-S SNP C -> A AC=1;AN=190;BQB=0.988935;DP=5123;DP4=2552,2258,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.60751e-10;MQSB=0.979943;RPB=0.947207;SGB=67.3108;VDB=0.620972;EFF=INTERGENIC(MODIFIER||||||||||1) FN1468-S.SNP.11:9135681 chr11:009135681 0 W/9135681-9135681 FN1468-S Single Base Substitution T-G INTERGENIC HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1037-S.SNP.11:9147620 chr11:009147620 0 W/9147620-9147620 FN1037-S Single Base Substitution A-T INTRON HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN3451-S.SNP.11:9150383 chr11:009150383 0 W/9150383-9150383 FN3451-S SNP T -> A AC=1;AN=184;BQB=0.916396;DP=2867;DP4=1427,1341,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.09692e-06;MQSB=0.969683;RPB=0.990432;SGB=35.1773;VDB=0.822117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F641Y|757|LOC_Os11g16530|protein_coding|CODING|LOC_Os11g16530.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F641Y|757|LOC_Os11g16530|protein_coding|CODING|LOC_Os11g16530.2|3|1) FN3509-S.SNP.11:9154882 chr11:009154882 0 W/9154882-9154882 FN3509-S SNP T -> C AC=1;AN=188;BQB=0.990446;DP=2903;DP4=1524,1300,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71419e-05;MQSB=0.987586;RPB=0.688075;SGB=30.8063;VDB=0.755557;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.11:9155356 chr11:009155356 0 W/9155356-9155356 FN3981-S SNP A -> T AC=2;AN=168;BQB=0.96462;DP=3022;DP4=1484,1393,16,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.11505e-17;MQSB=0.828293;RPB=0.843264;SGB=86.2102;VDB=0.960332;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.11:9155357 chr11:009155357 0 W/9155357-9155357 FN3981-S SNP A -> T AC=2;AN=168;BQB=0.986508;DP=3026;DP4=1467,1367,17,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.38762e-18;MQSB=0.899297;RPB=0.991076;SGB=89.641;VDB=0.947064;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.11:9179579 chr11:009179579 0 W/9179579-9179579 FN417-S Single Base Substitution C-T INTRON HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN3662-S.SNP.11:9181021 chr11:009181021 0 W/9181021-9181021 FN3662-S SNP T -> A AC=1;AN=190;BQB=0.445383;DP=2847;DP4=1279,1488,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.49837e-07;MQSB=0.978586;RPB=0.784467;SGB=39.9877;VDB=0.327895;EFF=INTRON(MODIFIER||||276|LOC_Os11g16560|protein_coding|CODING|LOC_Os11g16560.1|8|1) FN3437-S.SNP.11:9183869 chr11:009183869 0 W/9183869-9183869 FN3437-S SNP C -> T AC=1;AN=184;BQB=0.913864;DP=2911;DP4=1402,1391,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.09873e-08;MQSB=0.997006;RPB=0.888896;SGB=46.3132;VDB=0.192221;EFF=INTRON(MODIFIER||||276|LOC_Os11g16560|protein_coding|CODING|LOC_Os11g16560.1|1|1) FN3784-S.SNP.11:9184928 chr11:009184928 0 W/9184928-9184928 FN3784-S SNP A -> G AC=1;AN=190;BQB=0.967542;DP=2989;DP4=1239,1615,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1131e-07;MQSB=0.999372;RPB=0.0809993;SGB=43.2083;VDB=0.874197;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L182P|189|LOC_Os11g16570|protein_coding|CODING|LOC_Os11g16570.1|3|1) FN1332-S.SNP.11:9197175 chr11:009197175 0 W/9197175-9197175 FN1332-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g16590 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3366-S.SNP.11:9197882 chr11:009197882 0 W/9197882-9197882 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.883086;DP=3131;DP4=1939,1129,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.54973e-07;MQSB=0.802749;RPB=0.846686;SGB=53.2642;VDB=0.632065;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaG/gaA|E174|932|LOC_Os11g16590|protein_coding|CODING|LOC_Os11g16590.1|2|1) FN3302-S.SNP.11:9200226 chr11:009200226 0 W/9200226-9200226 FN3302-S SNP C -> T AC=1;AN=184;BQB=0.831702;DP=2754;DP4=1317,1311,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.7406e-07;MQSB=0.920857;RPB=0.174221;SGB=-2.32838;VDB=0.125558;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.11:9203891 chr11:009203891 0 W/9203891-9203891 FN3442-S SNP T -> G AC=2;AN=184;BQB=0.988718;DP=2969;DP4=1688,1189,16,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.74118e-13;MQSB=0.947236;RPB=0.589339;SGB=43.4494;VDB=0.0449218;EFF=STOP_LOST(HIGH|MISSENSE|tAa/tCa|*118S|117|LOC_Os11g16600|protein_coding|CODING|LOC_Os11g16600.1|3|1) FN3678-S.SNP.11:9204038 chr11:009204038 0 W/9204038-9204038 FN3678-S SNP T -> G AC=1;AN=190;BQB=0.33569;DP=3221;DP4=1550,1565,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61735e-05;MQSB=0.999888;RPB=0.985777;SGB=43.2083;VDB=0.991704;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cCc|H69P|117|LOC_Os11g16600|protein_coding|CODING|LOC_Os11g16600.1|3|1) FN497-S.SNP.11:9207577 chr11:009207577 0 W/9207577-9207577 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN975-S.SNP.11:9209696 chr11:009209696 0 W/9209696-9209696 FN975-S Single Base Substitution G-C INTRON HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN3442-S.SNP.11:9219695 chr11:009219695 0 W/9219695-9219695 FN3442-S SNP G -> A AC=2;AN=184;BQB=0.999142;DP=1673;DP4=566,1045,6,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.09992e-06;MQSB=0.90695;RPB=0.783463;SGB=48.7425;VDB=0.583244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1003-S.SNP.11:9223879 chr11:009223879 0 W/9223879-9223879 FN1003-S Single Base Substitution A-G INTRON HOMO SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN2231-S.SNP.11:9230302 chr11:009230302 0 W/9230302-9230302 FN2231-S SNP C -> G AC=1;AN=190;BQB=0.0557057;DP=4855;DP4=2304,2268,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26457e-14;MQSB=0.520074;RPB=0.431114;SGB=85.8548;VDB=0.309558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R102T|446|LOC_Os11g16640|protein_coding|CODING|LOC_Os11g16640.1|2|1) FN1205-S.SNP.11:9232257 chr11:009232257 0 W/9232257-9232257 FN1205-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN3834-S.SNP.11:9235390 chr11:009235390 0 W/9235390-9235390 FN3834-S SNP C -> T AC=1;AN=190;BQB=0.966384;DP=3249;DP4=1847,1272,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.40526e-08;MQSB=0.924698;RPB=0.724067;SGB=31.3213;VDB=0.629706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.11:9236068 chr11:009236068 0 W/9236068-9236068 FN-73 Single Base Substitution A-G INTRON HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN853-S.SNP.11:9245492 chr11:009245492 0 W/9245492-9245492 FN853-S Single Base Substitution C-G INTRON HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN2211-S.SNP.11:9245966 chr11:009245966 0 W/9245966-9245966 FN2211-S SNP G -> A AC=1;AN=190;BQB=0.914414;DP=5331;DP4=2629,2283,23,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.66092e-16;MQSB=0.79235;RPB=0.542261;SGB=-4.91383;VDB=0.528135;EFF=INTRON(MODIFIER||||359|LOC_Os11g16680|protein_coding|CODING|LOC_Os11g16680.1|1|1) FN438-S.SNP.11:9245966 chr11:009245966 0 W/9245966-9245966 FN438-S Single Base Substitution G-A INTRON HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2316.SNP.11:9256003 chr11:009256003 0 W/9256003-9256003 FN2316 SNP G -> A AC=1;AN=192;BQB=0.704349;DP=4693;DP4=2392,2040,18,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.61352e-16;MQSB=0.744861;RPB=0.8311;SGB=62.2505;VDB=0.202758;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.11:9258289 chr11:009258289 0 W/9258289-9258289 FN1381-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1381-S.SNP.11:9258296 chr11:009258296 0 W/9258296-9258296 FN1381-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2765-S.SNP.11:9258824 chr11:009258824 0 W/9258824-9258824 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.996983;DP=4087;DP4=2034,1890,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.65416e-08;MQSB=0.939253;RPB=0.620065;SGB=-35.8307;VDB=0.616795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.11:9261154 chr11:009261154 0 W/9261154-9261154 FN2444 SNP G -> A AC=2;AN=200;BQB=0.0788317;DP=3727;DP4=1636,1696,16,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000268312;MQB=4.32485e-11;MQSB=0.532237;RPB=0.870314;SGB=114.132;VDB=0.104081;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R81*|257|LOC_Os11g16710|protein_coding|CODING|LOC_Os11g16710.1|1|1) FN-210.SNP.11:9262361 chr11:009262361 0 W/9262361-9262361 FN-210 Single Base Substitution T-C INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN947-S.SNP.11:9263198 chr11:009263198 0 W/9263198-9263198 FN947-S Single Base Substitution T-C INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN-195.SNP.11:9264492 chr11:009264492 0 W/9264492-9264492 FN-195 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2698-S.SNP.11:9266171 chr11:009266171 0 W/9266171-9266171 FN2698-S SNP T -> G AC=1;AN=200;BQB=0.0232309;DP=4403;DP4=2150,2033,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.90568e-09;MQSB=0.964769;RPB=0.413783;SGB=-11.2947;VDB=0.281554;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.11:9270327 chr11:009270327 0 W/9270327-9270327 FN1521-S Single Base Substitution G-A INTRON HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1674-S.SNP.11:9271414 chr11:009271414 0 W/9271414-9271414 FN1674-S SNP A -> C AC=2;AN=188;BQB=0.386545;DP=2439;DP4=1110,1286,9,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.21382e-10;MQSB=0.998036;RPB=0.378471;SGB=-70.6427;VDB=0.509053;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L148W|517|LOC_Os11g16730|protein_coding|CODING|LOC_Os11g16730.1|2|1) FN3723-S.SNP.11:9280386 chr11:009280386 0 W/9280386-9280386 FN3723-S SNP A -> T AC=2;AN=190;BQB=0.991641;DP=2677;DP4=1312,1271,12,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.24714e-14;MQSB=0.984037;RPB=0.786402;SGB=99.1879;VDB=0.917528;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.11:9282248 chr11:009282248 0 W/9282248-9282248 FN2242-S SNP C -> T AC=2;AN=190;BQB=0.979936;DP=3572;DP4=1642,1561,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.82231e-16;MQSB=0.5659;RPB=0.758908;SGB=-43.9086;VDB=0.577742;EFF=INTERGENIC(MODIFIER||||||||||1) FN3541-S.SNP.11:9282776 chr11:009282776 0 W/9282776-9282776 FN3541-S SNP G -> C AC=1;AN=188;BQB=0.956838;DP=2482;DP4=1190,1231,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.25622e-06;MQSB=0.373187;RPB=0.954762;SGB=39.8925;VDB=0.92274;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.11:9284013 chr11:009284013 0 W/9284013-9284013 FN1392-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. W22-2-1.SNP.11:9300851 chr11:009300851 0 W/9300851-9300851 W22-2-1 Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-59.SNP.11:9302279 chr11:009302279 0 W/9302279-9302279 FN-59 Single Base Substitution C-G INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1133-S.SNP.11:9305401 chr11:009305401 0 W/9305401-9305401 FN1133-S Single Base Substitution G-A INTERGENIC HET SNo: 1000, Mutant_ID: FN1133-S, Generation: M2, Mutations: 48, Genes: 12, Seed availability: Yes. FN2491.SNP.11:9306784 chr11:009306784 0 W/9306784-9306784 FN2491 SNP G -> A AC=1;AN=200;BQB=0.718059;DP=4636;DP4=2168,2202,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18782e-09;MQSB=0.235197;RPB=0.884818;SGB=51.0851;VDB=0.636869;EFF=INTERGENIC(MODIFIER||||||||||1) FN-285.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN-285 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g16790 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN1278-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g16790 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2572-S.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.204279;DP=4539;DP4=2331,1981,10,38;HOB=5.10152e-05;ICB=0.000102546;MQ=19;MQ0F=0.466182;MQB=7.59934e-05;MQSB=0;RPB=0.582336;SGB=-47.9771;VDB=0.745563;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P708L|1602|LOC_Os11g16790|protein_coding|CODING|LOC_Os11g16790.1|1|1) FN2572-S.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN2572-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g16790 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN3450-S.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.884272;DP=3169;DP4=1338,1718,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.328495;MQB=0.187304;MQSB=0;RPB=0.922604;SGB=62.3078;VDB=0.995845;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P708L|1602|LOC_Os11g16790|protein_coding|CODING|LOC_Os11g16790.1|1|1) FN4161-S.SNP.11:9316026 chr11:009316026 0 W/9316026-9316026 FN4161-S SNP G -> A AC=2;AN=170;BQB=0.917133;DP=2714;DP4=1201,1404,15,21;HOB=0.0232526;ICB=0.494188;MQ=22;MQ0F=0.383935;MQB=0.344024;MQSB=0;RPB=0.774248;SGB=114.059;VDB=0.691526;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P708L|1602|LOC_Os11g16790|protein_coding|CODING|LOC_Os11g16790.1|1|1) FN3705-S.SNP.11:9324497 chr11:009324497 0 W/9324497-9324497 FN3705-S SNP C -> A AC=1;AN=190;BQB=0.864655;DP=2737;DP4=1348,1303,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.95834e-07;MQSB=0.986507;RPB=0.473786;SGB=18.552;VDB=0.300226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.11:9325444 chr11:009325444 0 W/9325444-9325444 FN3298-S SNP A -> T AC=1;AN=184;BQB=0.856626;DP=1769;DP4=1038,579,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000565291;MQB=3.06645e-05;MQSB=0.99778;RPB=0.8649;SGB=-3.85014;VDB=0.173848;EFF=INTERGENIC(MODIFIER||||||||||1) FN3514-S.SNP.11:9328603 chr11:009328603 0 W/9328603-9328603 FN3514-S SNP C -> A AC=1;AN=188;BQB=0.80146;DP=1947;DP4=1143,686,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.44221e-05;MQSB=0.19615;RPB=0.996575;SGB=30.8063;VDB=0.285428;EFF=INTRON(MODIFIER||||153|LOC_Os11g16800|protein_coding|CODING|LOC_Os11g16800.1|1|1) FN1478-S.SNP.11:9333840 chr11:009333840 0 W/9333840-9333840 FN1478-S Single Base Substitution T-A INTERGENIC HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN3500-S.SNP.11:9338169 chr11:009338169 0 W/9338169-9338169 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.287415;DP=4791;DP4=2473,2239,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.010645;MQB=0.159594;MQSB=2.70482e-07;RPB=0.562308;SGB=60.7873;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A294V|1789|LOC_Os11g16820|protein_coding|CODING|LOC_Os11g16820.1|2|1) FN2476.SNP.11:9343471 chr11:009343471 0 W/9343471-9343471 FN2476 SNP G -> A AC=1;AN=200;BQB=0.990673;DP=3344;DP4=1893,1223,9,4;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0460526;MQB=0.484528;MQSB=2.49805e-21;RPB=0.652439;SGB=36.6644;VDB=0.58469;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.11:9349322 chr11:009349322 0 W/9349322-9349322 FN4161-S SNP C -> T AC=2;AN=170;BQB=0.368019;DP=2537;DP4=1275,1172,17,15;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.000394166;MQB=1.02544e-08;MQSB=0.0107863;RPB=0.357745;SGB=100.288;VDB=0.541621;EFF=INTRON(MODIFIER||||127|LOC_Os11g16840|protein_coding|CODING|LOC_Os11g16840.1|4|1) FN3381-S.SNP.11:9349466 chr11:009349466 0 W/9349466-9349466 FN3381-S SNP C -> T AC=1;AN=184;BQB=0.508261;DP=3171;DP4=1422,1665,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0151372;MQB=0.375887;MQSB=0.775586;RPB=0.20036;SGB=32.2261;VDB=0.0397426;EFF=INTRON(MODIFIER||||127|LOC_Os11g16840|protein_coding|CODING|LOC_Os11g16840.1|4|1) FN1540-S.SNP.11:9350055 chr11:009350055 0 W/9350055-9350055 FN1540-S Single Base Substitution G-T INTRON HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3434-S.SNP.11:9350952 chr11:009350952 0 W/9350952-9350952 FN3434-S SNP T -> G AC=2;AN=184;BQB=0.971666;DP=2591;DP4=1365,1110,17,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.0366e-14;MQSB=0.935546;RPB=0.483954;SGB=107.526;VDB=0.127905;EFF=INTRON(MODIFIER||||127|LOC_Os11g16840|protein_coding|CODING|LOC_Os11g16840.1|2|1) W22-2-1.SNP.11:9355144 chr11:009355144 0 W/9355144-9355144 W22-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN4117-S.SNP.11:9363747 chr11:009363747 0 W/9363747-9363747 FN4117-S SNP T -> A AC=1;AN=182;BQB=0.937109;DP=3853;DP4=1941,1798,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=33;MQ0F=0.0970672;MQB=0.916613;MQSB=1.98256e-22;RPB=0.976887;SGB=32.1169;VDB=0.407317;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTt/cAt|L1476H|1719|LOC_Os11g16870|protein_coding|CODING|LOC_Os11g16870.1|2|1) FN1382-S.SNP.11:9370680 chr11:009370680 0 W/9370680-9370680 FN1382-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g16890 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1382-S.SNP.11:9370681 chr11:009370681 0 W/9370681-9370681 FN1382-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g16890 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2749-S.SNP.11:9382366 chr11:009382366 0 W/9382366-9382366 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.973048;DP=5114;DP4=2077,2620,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81506e-07;MQSB=0.99558;RPB=0.639027;SGB=-16.1361;VDB=0.636384;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.11:9382386 chr11:009382386 0 W/9382386-9382386 FN-232 Single Base Substitution A-C INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN2708-S.SNP.11:9383139 chr11:009383139 0 W/9383139-9383139 FN2708-S SNP A -> C AC=1;AN=200;BQB=0.511751;DP=4951;DP4=2493,2261,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27509e-11;MQSB=0.975458;RPB=0.95825;SGB=17.5158;VDB=0.941293;EFF=SYNONYMOUS_CODING(LOW|SILENT|Agg/Cgg|R34|195|LOC_Os11g16910|protein_coding|CODING|LOC_Os11g16910.1|1|1) FN3439-S.SNP.11:9390973 chr11:009390973 0 W/9390973-9390973 FN3439-S SNP C -> T AC=1;AN=184;BQB=0.967696;DP=3198;DP4=1502,1620,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.5312e-06;MQSB=0.983856;RPB=0.555707;SGB=35.1773;VDB=0.393825;EFF=INTRON(MODIFIER||||205|LOC_Os11g16924|protein_coding|CODING|LOC_Os11g16924.1|2|1),INTRON(MODIFIER||||205|LOC_Os11g16924|protein_coding|CODING|LOC_Os11g16924.2|2|1) FN2619-S.SNP.11:9393831 chr11:009393831 0 W/9393831-9393831 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.999116;DP=4323;DP4=1951,1971,19,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.94253e-17;MQSB=0.00395791;RPB=0.915211;SGB=137.217;VDB=0.898101;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.11:9394917 chr11:009394917 0 W/9394917-9394917 FN-149 Single Base Substitution G-A INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN1420-S.SNP.11:9398032 chr11:009398032 0 W/9398032-9398032 FN1420-S Single Base Substitution C-G INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN1420-S.SNP.11:9398033 chr11:009398033 0 W/9398033-9398033 FN1420-S Single Base Substitution G-C INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN418-S.SNP.11:9402483 chr11:009402483 0 W/9402483-9402483 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-147.SNP.11:9407979 chr11:009407979 0 W/9407979-9407979 FN-147 Single Base Substitution C-A INTRON HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN369-S.SNP.11:9415292 chr11:009415292 0 W/9415292-9415292 FN369-S Single Base Substitution A-T INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3935-S.SNP.11:9417353 chr11:009417353 0 W/9417353-9417353 FN3935-S SNP T -> A AC=2;AN=158;BQB=0.918016;DP=2627;DP4=1192,1304,22,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.4456e-22;MQSB=0.475429;RPB=0.945549;SGB=85.4243;VDB=0.473174;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E241V|244|LOC_Os11g16990|protein_coding|CODING|LOC_Os11g16990.1|1|1) FN1575-S.SNP.11:9417622 chr11:009417622 0 W/9417622-9417622 FN1575-S Single Base Substitution C-A SYNONYMOUS_CODING Homo SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN3699-S.SNP.11:9423147 chr11:009423147 0 W/9423147-9423147 FN3699-S SNP A -> G AC=1;AN=190;BQB=0.893054;DP=2931;DP4=1338,1449,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.66138e-10;MQSB=0.975462;RPB=0.724789;SGB=31.3213;VDB=0.914506;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.11:9423338 chr11:009423338 0 W/9423338-9423338 FN3667-S SNP A -> T AC=1;AN=190;BQB=0.897339;DP=2770;DP4=1309,1275,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34356e-09;MQSB=0.98664;RPB=0.859318;SGB=28.7675;VDB=0.93597;EFF=INTERGENIC(MODIFIER||||||||||1) FN4105-S.SNP.11:9425630 chr11:009425630 0 W/9425630-9425630 FN4105-S SNP C -> T AC=2;AN=182;BQB=0.990841;DP=2815;DP4=1432,1258,10,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.11657e-11;MQSB=0.949341;RPB=0.523509;SGB=53.182;VDB=0.358864;EFF=INTRON(MODIFIER||||866|LOC_Os11g17014|protein_coding|CODING|LOC_Os11g17014.1|1|1) FN3691-S.SNP.11:9433826 chr11:009433826 0 W/9433826-9433826 FN3691-S SNP G -> C AC=1;AN=190;BQB=0.370617;DP=2889;DP4=1395,1374,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63434e-06;MQSB=0.928711;RPB=0.934757;SGB=43.2083;VDB=0.183942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.11:9437658 chr11:009437658 0 W/9437658-9437658 FN2549-S SNP T -> G AC=2;AN=198;BQB=0.632453;DP=4275;DP4=2144,1921,4,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.43375e-06;MQSB=0.88716;RPB=0.939374;SGB=29.3637;VDB=0.0333891;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.11:9438278 chr11:009438278 0 W/9438278-9438278 FN2377 SNP C -> A AC=1;AN=192;BQB=0.151373;DP=4586;DP4=2217,2036,14,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.7448e-16;MQSB=0.795894;RPB=0.953944;SGB=103.938;VDB=0.752319;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A44E|131|LOC_Os11g17030|protein_coding|CODING|LOC_Os11g17030.1|1|1) FN2204-S.SNP.11:9438602 chr11:009438602 0 W/9438602-9438602 FN2204-S SNP C -> A AC=1;AN=190;BQB=0.977853;DP=4192;DP4=1815,1972,16,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00023855;MQB=8.7553e-08;MQSB=0.00323223;RPB=0.580328;SGB=68.0854;VDB=0.19901;EFF=INTERGENIC(MODIFIER||||||||||1) FN-402.SNP.11:9451411 chr11:009451411 0 W/9451411-9451411 FN-402 Single Base Substitution T-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN424-S.SNP.11:9453142 chr11:009453142 0 W/9453142-9453142 FN424-S Single Base Substitution G-A INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN424-S.SNP.11:9453143 chr11:009453143 0 W/9453143-9453143 FN424-S Single Base Substitution C-G INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1538-S.SNP.11:9453563 chr11:009453563 0 W/9453563-9453563 FN1538-S Single Base Substitution A-G INTERGENIC HET SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2431.SNP.11:9457003 chr11:009457003 0 W/9457003-9457003 FN2431 SNP T -> C AC=1;AN=200;BQB=0.999374;DP=4704;DP4=2230,2172,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.01343e-07;MQSB=0.881047;RPB=0.847634;SGB=43.8747;VDB=0.528562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2356.SNP.11:9459651 chr11:009459651 0 W/9459651-9459651 FN2356 SNP T -> A AC=1;AN=192;BQB=0.170137;DP=4777;DP4=2212,2249,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.4976e-14;MQSB=0.868554;RPB=0.929012;SGB=-9.12519;VDB=0.41125;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.11:9459651 chr11:009459651 0 W/9459651-9459651 FN512-S Single Base Substitution T-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN2175-S.SNP.11:9460763 chr11:009460763 0 W/9460763-9460763 FN2175-S SNP C -> T AC=1;AN=168;BQB=0.281111;DP=3547;DP4=1611,1880,4,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.18808e-08;MQSB=0.988074;RPB=0.0413031;SGB=-15.3725;VDB=0.183541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.11:9473082 chr11:009473082 0 W/9473082-9473082 FN-64 Single Base Substitution C-T INTRON HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN2354.SNP.11:9477912 chr11:009477912 0 W/9477912-9477912 FN2354 SNP A -> T AC=1;AN=192;BQB=0.765161;DP=4978;DP4=2657,2011,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.66644e-08;MQSB=0.999851;RPB=0.460799;SGB=-15.8974;VDB=0.355325;EFF=INTRON(MODIFIER||||498|LOC_Os11g17080|protein_coding|CODING|LOC_Os11g17080.1|9|1),INTRON(MODIFIER||||402|LOC_Os11g17080|protein_coding|CODING|LOC_Os11g17080.2|9|1),INTRON(MODIFIER||||276|LOC_Os11g17080|protein_coding|CODING|LOC_Os11g17080.3|10|1) FN861-S.SNP.11:9485197 chr11:009485197 0 W/9485197-9485197 FN861-S Single Base Substitution C-T INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN1356-S.SNP.11:9489738 chr11:009489738 0 W/9489738-9489738 FN1356-S Single Base Substitution G-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2470.SNP.11:9491906 chr11:009491906 0 W/9491906-9491906 FN2470 SNP G -> A AC=1;AN=200;BQB=0.571171;DP=4532;DP4=2077,2216,6,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00353045;MQB=3.54794e-06;MQSB=0.184993;RPB=0.295024;SGB=54.6902;VDB=0.580828;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.11:9495132 chr11:009495132 0 W/9495132-9495132 FN887-S Single Base Substitution C-A INTERGENIC HOMO SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN3932-S.SNP.11:9509459 chr11:009509459 0 W/9509459-9509459 FN3932-S SNP G -> C AC=1;AN=158;BQB=0.988665;DP=2419;DP4=1049,1289,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.31145e-08;MQSB=0.930702;RPB=0.7674;SGB=47.0672;VDB=0.558117;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.11:9514117 chr11:009514117 0 W/9514117-9514117 FN1233-S Single Base Substitution A-T INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1630-S.SNP.11:9514556 chr11:009514556 0 W/9514556-9514556 FN1630-S Single Base Substitution G-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2496.SNP.11:9516000 chr11:009516000 0 W/9516000-9516000 FN2496 SNP A -> T AC=1;AN=200;BQB=0.749324;DP=4582;DP4=1941,2283,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00862e-12;MQSB=0.893987;RPB=0.974539;SGB=34.6953;VDB=0.311257;EFF=INTRON(MODIFIER||||537|LOC_Os11g17130|protein_coding|CODING|LOC_Os11g17130.1|1|1) FN1284-S.SNP.11:9516451 chr11:009516451 0 W/9516451-9516451 FN1284-S Single Base Substitution G-C INTRON HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN1520-S.SNP.11:9520059 chr11:009520059 0 W/9520059-9520059 FN1520-S Single Base Substitution T-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1520-S.SNP.11:9520065 chr11:009520065 0 W/9520065-9520065 FN1520-S Single Base Substitution G-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2191-S.SNP.11:9521397 chr11:009521397 0 W/9521397-9521397 FN2191-S SNP G -> C AC=2;AN=190;BQB=0.956386;DP=3889;DP4=1571,2003,11,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.45989e-12;MQSB=0.299717;RPB=0.910658;SGB=56.8601;VDB=0.749836;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.11:9523418 chr11:009523418 0 W/9523418-9523418 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.998322;DP=2740;DP4=1349,1311,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.08812e-09;MQSB=0.641141;RPB=0.746932;SGB=38.3207;VDB=0.209247;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R130H|759|LOC_Os11g17150|protein_coding|CODING|LOC_Os11g17150.1|5|1) FN-232.SNP.11:9524658 chr11:009524658 0 W/9524658-9524658 FN-232 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN4100-S.SNP.11:9524893 chr11:009524893 0 W/9524893-9524893 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.954039;DP=3144;DP4=1537,1538,12,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.12708e-15;MQSB=0.995463;RPB=0.381696;SGB=98.2417;VDB=0.388435;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R584C|759|LOC_Os11g17150|protein_coding|CODING|LOC_Os11g17150.1|6|1) FN3537-S.SNP.11:9527485 chr11:009527485 0 W/9527485-9527485 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.993465;DP=3066;DP4=1581,1430,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40954e-08;MQSB=0.772693;RPB=0.224076;SGB=62.6088;VDB=0.675016;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H668|761|LOC_Os11g17160|protein_coding|CODING|LOC_Os11g17160.1|8|1) FN934-S.SNP.11:9536299 chr11:009536299 0 W/9536299-9536299 FN934-S Single Base Substitution C-A INTERGENIC HET SNo: 840, Mutant_ID: FN934-S, Generation: M2, Mutations: 74, Genes: 47, Seed availability: Yes. FN2223-S.SNP.11:9536403 chr11:009536403 0 W/9536403-9536403 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.976218;DP=4520;DP4=2305,1939,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00973451;MQB=9.12284e-06;MQSB=5.69332e-12;RPB=0.590621;SGB=13.4344;VDB=0.769231;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.11:9539692 chr11:009539692 0 W/9539692-9539692 FN785-S Single Base Substitution C-T INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN914-S.SNP.11:9540247 chr11:009540247 0 W/9540247-9540247 FN914-S Single Base Substitution A-C INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN-213.SNP.11:9540996 chr11:009540996 0 W/9540996-9540996 FN-213 Single Base Substitution G-A INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN2217-S.SNP.11:9541141 chr11:009541141 0 W/9541141-9541141 FN2217-S SNP A -> T AC=1;AN=190;BQB=0.766855;DP=4564;DP4=1995,2010,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.79772e-09;MQSB=0.985585;RPB=0.958095;SGB=-37.6628;VDB=0.0764371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1373-S.SNP.11:9543104 chr11:009543104 0 W/9543104-9543104 FN1373-S Single Base Substitution G-A INTERGENIC Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN3716-S.SNP.11:9543620 chr11:009543620 0 W/9543620-9543620 FN3716-S SNP C -> T AC=1;AN=190;BQB=0.999535;DP=2925;DP4=1610,1203,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39423e-08;MQSB=0.998134;RPB=0.999665;SGB=53.6492;VDB=0.966365;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.11:9546637 chr11:009546637 0 W/9546637-9546637 FN488-S Single Base Substitution C-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN488-S.SNP.11:9546638 chr11:009546638 0 W/9546638-9546638 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2795-S.SNP.11:9549510 chr11:009549510 0 W/9549510-9549510 FN2795-S SNP T -> A AC=1;AN=198;BQB=0.97946;DP=4358;DP4=2052,2152,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.93385e-09;MQSB=0.954121;RPB=0.940416;SGB=6.15916;VDB=0.0680677;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.11:9559502 chr11:009559502 0 W/9559502-9559502 FN627-S Single Base Substitution A-G INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN-359.SNP.11:9562665 chr11:009562665 0 W/9562665-9562665 FN-359 Single Base Substitution A-C INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN866-S.SNP.11:9563718 chr11:009563718 0 W/9563718-9563718 FN866-S Single Base Substitution C-A INTERGENIC HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN239-S.SNP.11:9586381 chr11:009586381 0 W/9586381-9586381 FN239-S Single Base Substitution A-G INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3845-S.SNP.11:9588023 chr11:009588023 0 W/9588023-9588023 FN3845-S SNP A -> T AC=1;AN=190;BQB=0.999866;DP=2415;DP4=1108,1199,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00331263;MQB=0.000851088;MQSB=0.866558;RPB=0.922223;SGB=25.439;VDB=0.882989;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.11:9588545 chr11:009588545 0 W/9588545-9588545 FN4135-S SNP A -> T AC=1;AN=182;BQB=0.990232;DP=2257;DP4=1259,949,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.46478e-07;MQSB=0.211638;RPB=0.889867;SGB=44.1115;VDB=0.295187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.11:9589383 chr11:009589383 0 W/9589383-9589383 FN2304 SNP C -> T AC=1;AN=192;BQB=0.47815;DP=3729;DP4=1374,2122,5,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.12055e-07;MQSB=0.431178;RPB=0.993463;SGB=29.087;VDB=0.649418;EFF=INTERGENIC(MODIFIER||||||||||1) FN1551-S.SNP.11:9594711 chr11:009594711 0 W/9594711-9594711 FN1551-S Single Base Substitution T-C INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2568-S.SNP.11:9594860 chr11:009594860 0 W/9594860-9594860 FN2568-S SNP C -> T AC=1;AN=198;BQB=0.686902;DP=3873;DP4=2218,1463,2,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000258198;MQB=4.38752e-05;MQSB=0.55367;RPB=0.817901;SGB=31.1689;VDB=0.836076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.11:9597616 chr11:009597616 0 W/9597616-9597616 FN3592-S SNP A -> G AC=1;AN=188;BQB=0.40291;DP=3280;DP4=1949,1100,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00487805;MQB=1.28743e-05;MQSB=2.60625e-14;RPB=0.975724;SGB=16.3413;VDB=0.473987;EFF=INTRON(MODIFIER||||92|LOC_Os11g17220|protein_coding|CODING|LOC_Os11g17220.1|1|1) FN753-S.SNP.11:9600109 chr11:009600109 0 W/9600109-9600109 FN753-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g17230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. W463-2-1.SNP.11:9600208 chr11:009600208 0 W/9600208-9600208 W463-2-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g17230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1707-S.SNP.11:9600557 chr11:009600557 0 W/9600557-9600557 FN1707-S SNP G -> T AC=1;AN=188;BQB=0.555306;DP=2350;DP4=1233,1076,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000425532;MQB=3.9418e-10;MQSB=0.982125;RPB=0.0898347;SGB=57.244;VDB=0.183991;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A806|1285|LOC_Os11g17230|protein_coding|CODING|LOC_Os11g17230.1|3|1) FN2114-S.SNP.11:9602651 chr11:009602651 0 W/9602651-9602651 FN2114-S SNP G -> A AC=1;AN=168;BQB=0.993611;DP=1921;DP4=922,959,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000721859;MQSB=0.993923;RPB=0.541554;SGB=25.5891;VDB=0.405339;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q175*|1285|LOC_Os11g17230|protein_coding|CODING|LOC_Os11g17230.1|1|1);LOF=(LOC_Os11g17230|LOC_Os11g17230|1|1.00);NMD=(LOC_Os11g17230|LOC_Os11g17230|1|1.00) FN2334.SNP.11:9613046 chr11:009613046 0 W/9613046-9613046 FN2334 SNP G -> A AC=1;AN=192;BQB=0.183905;DP=4123;DP4=1729,2002,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.01891e-07;MQSB=0.748884;RPB=0.501049;SGB=-15.333;VDB=0.694533;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.11:9613939 chr11:009613939 0 W/9613939-9613939 FN859-S Single Base Substitution T-G INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1636-S.SNP.11:9614994 chr11:009614994 0 W/9614994-9614994 FN1636-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g17260 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2495.SNP.11:9645199 chr11:009645199 0 W/9645199-9645199 FN2495 SNP A -> C AC=2;AN=200;BQB=0.980793;DP=3386;DP4=1445,1688,7,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000590667;MQB=1.84149e-10;MQSB=0.935373;RPB=0.846046;SGB=77.2904;VDB=0.614058;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.11:9645695 chr11:009645695 0 W/9645695-9645695 FN2365 SNP A -> C AC=1;AN=192;BQB=0.336424;DP=3756;DP4=1335,1643,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=1.83901e-07;MQSB=1.46725e-16;RPB=0.268691;SGB=-197.916;VDB=0.212472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.11:9647831 chr11:009647831 0 W/9647831-9647831 FN3610-S SNP C -> T AC=2;AN=190;BQB=0.686677;DP=2637;DP4=995,1517,10,14;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.104664;MQB=0.952899;MQSB=0;RPB=0.315211;SGB=18.096;VDB=0.710015;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.11:9651093 chr11:009651093 0 W/9651093-9651093 FN3903-S SNP A -> T AC=2;AN=158;BQB=0.968238;DP=2237;DP4=1013,1101,16,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.36849e-14;MQSB=0.935233;RPB=0.647404;SGB=81.2457;VDB=0.211932;EFF=INTRON(MODIFIER||||1500|LOC_Os11g17310|protein_coding|CODING|LOC_Os11g17310.1|2|1) FN3976-S.SNP.11:9653148 chr11:009653148 0 W/9653148-9653148 FN3976-S SNP A -> C AC=1;AN=168;BQB=0.967602;DP=2726;DP4=1350,1287,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00623624;MQB=4.79451e-08;MQSB=0.0054076;RPB=0.199423;SGB=65.4653;VDB=0.252016;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcC|S995|1500|LOC_Os11g17310|protein_coding|CODING|LOC_Os11g17310.1|7|1) FN3399-S.SNP.11:9656766 chr11:009656766 0 W/9656766-9656766 FN3399-S SNP C -> T AC=1;AN=184;BQB=0.898631;DP=2608;DP4=1321,1198,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68462e-06;MQSB=0.755246;RPB=0.750384;SGB=25.1826;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1739-S.SNP.11:9658132 chr11:009658132 0 W/9658132-9658132 FN1739-S SNP G -> T AC=1;AN=188;BQB=0.400181;DP=1871;DP4=707,1137,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00132586;MQSB=0.862272;RPB=0.99941;SGB=10.8165;VDB=0.751563;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.11:9663528 chr11:009663528 0 W/9663528-9663528 FN2550-S SNP G -> A AC=1;AN=198;BQB=0.573935;DP=4125;DP4=2158,1776,3,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000242424;MQB=0.000470446;MQSB=0.84517;RPB=0.626289;SGB=21.981;VDB=0.17309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R138H|957|LOC_Os11g17330|protein_coding|CODING|LOC_Os11g17330.1|1|1) FN2300.SNP.11:9670309 chr11:009670309 0 W/9670309-9670309 FN2300 SNP T -> C AC=1;AN=192;BQB=0.622313;DP=5151;DP4=2525,2372,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.61603e-15;MQSB=0.998645;RPB=0.794846;SGB=78.9878;VDB=0.0327139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3288-S.SNP.11:9670664 chr11:009670664 0 W/9670664-9670664 FN3288-S SNP G -> A AC=1;AN=184;BQB=0.987671;DP=2847;DP4=1466,1300,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000351247;MQB=4.72302e-06;MQSB=0.848275;RPB=0.492654;SGB=35.1773;VDB=0.807765;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN1340-S Single Base Substitution G-A INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1582-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN1582-S Single Base Substitution G-A INTERGENIC HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3391-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.450158;DP=3188;DP4=1636,1463,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000406017;MQSB=0.934491;RPB=0.652206;SGB=44.2207;VDB=0.194065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3499-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN3499-S SNP G -> A AC=1;AN=188;BQB=0.809883;DP=2927;DP4=1448,1430,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.3559e-07;MQSB=0.99323;RPB=0.971835;SGB=58.0655;VDB=0.337067;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN3815-S SNP G -> A AC=2;AN=190;BQB=0.888799;DP=2926;DP4=1449,1387,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.02442e-15;MQSB=0.95968;RPB=0.860581;SGB=103.742;VDB=0.238873;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.11:9674140 chr11:009674140 0 W/9674140-9674140 FN3939-S SNP G -> A AC=1;AN=158;BQB=0.933928;DP=2595;DP4=1319,1215,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000385356;MQB=3.95017e-09;MQSB=0.976264;RPB=0.455418;SGB=37.4429;VDB=0.0394664;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.11:9678464 chr11:009678464 0 W/9678464-9678464 FN2785-S SNP A -> G AC=1;AN=198;BQB=0.66008;DP=4048;DP4=2023,1830,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07351e-06;MQSB=0.999083;RPB=0.792303;SGB=40.3588;VDB=0.837034;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.11:9678576 chr11:009678576 0 W/9678576-9678576 FN768-S Single Base Substitution C-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN886-S.SNP.11:9680728 chr11:009680728 0 W/9680728-9680728 FN886-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1163-S.SNP.11:9681300 chr11:009681300 0 W/9681300-9681300 FN1163-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2259-S.SNP.11:9684713 chr11:009684713 0 W/9684713-9684713 FN2259-S SNP G -> T AC=2;AN=190;BQB=0.808239;DP=4114;DP4=1915,1938,16,21;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00486145;MQB=4.29891e-15;MQSB=0.63328;RPB=0.6952;SGB=38.2964;VDB=0.102828;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.11:9684714 chr11:009684714 0 W/9684714-9684714 FN2259-S SNP G -> A AC=2;AN=190;BQB=0.819535;DP=4116;DP4=1898,1926,17,17;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.005345;MQB=7.15316e-16;MQSB=0.579149;RPB=0.658147;SGB=110.732;VDB=0.108086;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.11:9691924 chr11:009691924 0 W/9691924-9691924 FN513-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g17380 protein kinase domain containing protein, expressed SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2561-S.SNP.11:9695902 chr11:009695902 0 W/9695902-9695902 FN2561-S SNP A -> T AC=1;AN=198;BQB=0.868473;DP=4296;DP4=1918,2146,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232775;MQB=6.57449e-09;MQSB=0.710113;RPB=0.802775;SGB=40.149;VDB=0.275522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1128-S.SNP.11:9707882 chr11:009707882 0 W/9707882-9707882 FN1128-S Single Base Substitution C-T INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN3578-S.SNP.11:9709478 chr11:009709478 0 W/9709478-9709478 FN3578-S SNP C -> T AC=2;AN=188;BQB=0.954086;DP=2636;DP4=1321,1226,23,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.39178e-20;MQSB=0.891294;RPB=0.745454;SGB=99.7635;VDB=0.326429;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G62|499|LOC_Os11g17410|protein_coding|CODING|LOC_Os11g17410.1|1|1) FN3578-S.SNP.11:9709480 chr11:009709480 0 W/9709480-9709480 FN3578-S SNP C -> A AC=2;AN=188;BQB=0.922115;DP=2634;DP4=1320,1219,23,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.37415e-19;MQSB=0.795785;RPB=0.544266;SGB=96.2203;VDB=0.188762;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T63K|499|LOC_Os11g17410|protein_coding|CODING|LOC_Os11g17410.1|1|1) FN570-S.SNP.11:9718876 chr11:009718876 0 W/9718876-9718876 FN570-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g17430 retrotransposon protein, putative, unclassified, expressed SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN1278-S.SNP.11:9728930 chr11:009728930 0 W/9728930-9728930 FN1278-S Single Base Substitution G-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1278-S.SNP.11:9728932 chr11:009728932 0 W/9728932-9728932 FN1278-S Single Base Substitution G-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1278-S.SNP.11:9728935 chr11:009728935 0 W/9728935-9728935 FN1278-S Single Base Substitution T-A INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN-217.SNP.11:9733185 chr11:009733185 0 W/9733185-9733185 FN-217 Single Base Substitution G-A INTERGENIC HET SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN989-S.SNP.11:9735594 chr11:009735594 0 W/9735594-9735594 FN989-S Single Base Substitution C-T INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN3727-S.SNP.11:9735826 chr11:009735826 0 W/9735826-9735826 FN3727-S SNP G -> A AC=1;AN=190;BQB=0.999725;DP=2801;DP4=1653,1047,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46879e-08;MQSB=0.720584;RPB=0.321445;SGB=10.3266;VDB=0.0423337;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:9735965 chr11:009735965 0 W/9735965-9735965 FN2337 SNP G -> A AC=1;AN=192;BQB=0.980059;DP=4794;DP4=2500,1972,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.0474e-10;MQSB=0.991284;RPB=0.330301;SGB=12.0478;VDB=0.00182175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3841-S.SNP.11:9743801 chr11:009743801 0 W/9743801-9743801 FN3841-S SNP C -> A AC=2;AN=190;BQB=0.974658;DP=2462;DP4=958,1365,13,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.9619e-17;MQSB=0.77929;RPB=0.9826;SGB=24.3115;VDB=0.553517;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.11:9755086 chr11:009755086 0 W/9755086-9755086 FN4167-S SNP C -> G AC=1;AN=170;BQB=0.990088;DP=2236;DP4=1170,968,13,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.14096e-10;MQSB=0.911607;RPB=0.982492;SGB=78.9707;VDB=0.941422;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P38R|266|LOC_Os11g17504|protein_coding|CODING|LOC_Os11g17504.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cGg|P38R|127|LOC_Os11g17504|protein_coding|CODING|LOC_Os11g17504.2|1|1) FN-156.SNP.11:9755885 chr11:009755885 0 W/9755885-9755885 FN-156 Single Base Substitution G-A INTRON HOMO SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN2306.SNP.11:9756293 chr11:009756293 0 W/9756293-9756293 FN2306 SNP G -> A AC=1;AN=192;BQB=0.986024;DP=4721;DP4=2188,2155,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.92901e-05;MQSB=0.927576;RPB=0.995441;SGB=10.9636;VDB=0.814818;EFF=INTRON(MODIFIER||||266|LOC_Os11g17504|protein_coding|CODING|LOC_Os11g17504.1|2|1),INTRON(MODIFIER||||127|LOC_Os11g17504|protein_coding|CODING|LOC_Os11g17504.2|2|1) FN4120-S.SNP.11:9762389 chr11:009762389 0 W/9762389-9762389 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.877472;DP=2934;DP4=1248,1571,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=18;MQ0F=0.239605;MQB=0.397208;MQSB=4.96954e-11;RPB=0.894869;SGB=49.6712;VDB=0.546717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R59W|374|LOC_Os11g17520|protein_coding|CODING|LOC_Os11g17520.1|2|1) FN748-S.SNP.11:9772921 chr11:009772921 0 W/9772921-9772921 FN748-S Single Base Substitution T-A INTERGENIC HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2792-S.SNP.11:9774269 chr11:009774269 0 W/9774269-9774269 FN2792-S SNP T -> C AC=1;AN=198;BQB=0.949145;DP=4484;DP4=2057,2246,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17576e-09;MQSB=0.266498;RPB=0.544968;SGB=47.3393;VDB=0.69086;EFF=INTRON(MODIFIER||||280|LOC_Os11g17540|protein_coding|CODING|LOC_Os11g17540.1|2|1) FN1582-S.SNP.11:9776742 chr11:009776742 0 W/9776742-9776742 FN1582-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN1582-S.SNP.11:9776743 chr11:009776743 0 W/9776743-9776743 FN1582-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN3380-S.SNP.11:9777744 chr11:009777744 0 W/9777744-9777744 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.981295;DP=2954;DP4=1327,1530,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45352e-09;MQSB=0.998232;RPB=0.802969;SGB=46.3132;VDB=0.909278;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.11:9781411 chr11:009781411 0 W/9781411-9781411 FN389-S Single Base Substitution T-A INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN3555-S.SNP.11:9785251 chr11:009785251 0 W/9785251-9785251 FN3555-S SNP G -> C AC=2;AN=188;BQB=0.987965;DP=4187;DP4=2184,1865,36,24;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.1259e-32;MQSB=0.855294;RPB=0.734333;SGB=267.057;VDB=0.957343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G35A|117|LOC_Os11g17570|protein_coding|CODING|LOC_Os11g17570.1|1|1) FN2607-S.SNP.11:9786904 chr11:009786904 0 W/9786904-9786904 FN2607-S SNP A -> G AC=1;AN=198;BQB=0.99999;DP=4224;DP4=1913,2113,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000248392;MQSB=0.999766;RPB=0.339231;SGB=18.5788;VDB=0.251998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.11:9787815 chr11:009787815 0 W/9787815-9787815 FN3058-S SNP G -> A AC=1;AN=184;BQB=0.666972;DP=3311;DP4=1836,1282,16,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.80042e-12;MQSB=0.707775;RPB=0.999658;SGB=51.0148;VDB=0.90251;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.11:9797206 chr11:009797206 0 W/9797206-9797206 FN-159 Single Base Substitution C-T INTRON HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN2541-S.SNP.11:9797479 chr11:009797479 0 W/9797479-9797479 FN2541-S SNP C -> G AC=1;AN=198;BQB=0.761178;DP=4586;DP4=2010,2113,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.36018e-09;MQSB=0.871419;RPB=0.908561;SGB=-36.2356;VDB=0.145838;EFF=INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.1|5|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.2|5|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.3|5|1) FN1243-S.SNP.11:9799947 chr11:009799947 0 W/9799947-9799947 FN1243-S Single Base Substitution T-C INTRON HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2288.SNP.11:9803463 chr11:009803463 0 W/9803463-9803463 FN2288 SNP T -> A AC=1;AN=192;BQB=0.947833;DP=4886;DP4=2254,2280,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000204666;MQB=2.96426e-12;MQSB=0.875651;RPB=0.756785;SGB=12.0478;VDB=0.782577;EFF=INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.1|13|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.2|13|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.3|13|1) FN4249-S.SNP.11:9804749 chr11:009804749 0 W/9804749-9804749 FN4249-S SNP A -> G AC=2;AN=170;BQB=0.917725;DP=2322;DP4=1070,1188,9,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000430663;MQB=5.2791e-08;MQSB=0.788104;RPB=0.836743;SGB=38.3207;VDB=0.738512;EFF=INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.1|18|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.2|18|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.3|18|1) FN940-S.SNP.11:9805705 chr11:009805705 0 W/9805705-9805705 FN940-S Single Base Substitution T-G INTRON HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-138.SNP.11:9807390 chr11:009807390 0 W/9807390-9807390 FN-138 Single Base Substitution T-C INTRON HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN2220-S.SNP.11:9807806 chr11:009807806 0 W/9807806-9807806 FN2220-S SNP T -> C AC=2;AN=190;BQB=0.955634;DP=4775;DP4=2288,2194,26,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.29409e-32;MQSB=0.627104;RPB=0.999347;SGB=199.579;VDB=0.165817;EFF=INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.3|25|1),INTRON(MODIFIER||||875|LOC_Os11g17600|protein_coding|CODING|LOC_Os11g17600.2|25|1) FN2209-S.SNP.11:9810348 chr11:009810348 0 W/9810348-9810348 FN2209-S SNP A -> G AC=1;AN=190;BQB=0.902731;DP=4792;DP4=2325,2187,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000208681;MQB=9.48423e-16;MQSB=0.862179;RPB=0.999907;SGB=61.9679;VDB=0.894081;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.11:9824747 chr11:009824747 0 W/9824747-9824747 FN2630-S SNP C -> T AC=2;AN=200;BQB=0.593321;DP=4911;DP4=2004,2531,15,33;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.68687e-26;MQSB=0.0643162;RPB=0.624641;SGB=162.845;VDB=0.285083;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.11:9825839 chr11:009825839 0 W/9825839-9825839 FN4141-S SNP A -> T AC=1;AN=170;BQB=0.997458;DP=2144;DP4=1143,953,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.33386e-08;MQSB=0.939463;RPB=0.107117;SGB=47.8722;VDB=0.334886;EFF=INTERGENIC(MODIFIER||||||||||1) FN476-S.SNP.11:9829555 chr11:009829555 0 W/9829555-9829555 FN476-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g17620 expressed protein SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2237-S.SNP.11:9831681 chr11:009831681 0 W/9831681-9831681 FN2237-S SNP T -> A AC=1;AN=190;BQB=0.999991;DP=5002;DP4=2184,2459,3,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000278761;MQSB=0.860803;RPB=0.996981;SGB=21.7749;VDB=0.917952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S64T|196|LOC_Os11g17630|protein_coding|CODING|LOC_Os11g17630.1|1|1) FN2487.SNP.11:9836790 chr11:009836790 0 W/9836790-9836790 FN2487 SNP T -> G AC=1;AN=200;BQB=0.974089;DP=4953;DP4=2338,2290,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.3489e-18;MQSB=0.995916;RPB=0.761017;SGB=87.1368;VDB=0.160027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.11:9836791 chr11:009836791 0 W/9836791-9836791 FN2487 SNP C -> T AC=1;AN=200;BQB=0.960366;DP=4964;DP4=2379,2289,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35163e-16;MQSB=0.988429;RPB=0.922518;SGB=109.527;VDB=0.217027;EFF=INTERGENIC(MODIFIER||||||||||1) FN2487.SNP.11:9836793 chr11:009836793 0 W/9836793-9836793 FN2487 SNP T -> C AC=1;AN=200;BQB=0.993801;DP=5003;DP4=2421,2328,13,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43557e-16;MQSB=0.994829;RPB=0.971614;SGB=109.527;VDB=0.201109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.11:9837952 chr11:009837952 0 W/9837952-9837952 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.341118;DP=4062;DP4=1944,1874,16,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000246184;MQB=1.41156e-15;MQSB=0.915505;RPB=0.135922;SGB=104.69;VDB=0.83705;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.11:9842739 chr11:009842739 0 W/9842739-9842739 FN2563-S SNP C -> G AC=1;AN=198;BQB=0.938918;DP=4131;DP4=1951,1978,2,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000936001;MQSB=0.851936;RPB=0.770519;SGB=14.9842;VDB=0.433529;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aGa|T99R|101|LOC_Os11g17640|protein_coding|CODING|LOC_Os11g17640.1|3|1) FN2771-S.SNP.11:9843842 chr11:009843842 0 W/9843842-9843842 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.306559;DP=4340;DP4=1904,2113,15,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.80553e-10;MQSB=0.956833;RPB=0.89248;SGB=-61.2305;VDB=0.581348;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.11:9844220 chr11:009844220 0 W/9844220-9844220 FN3855-S SNP G -> A AC=1;AN=158;BQB=0.682039;DP=2850;DP4=1358,1370,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000181928;MQSB=0.98081;RPB=0.278845;SGB=38.3284;VDB=0.0147504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.11:9844391 chr11:009844391 0 W/9844391-9844391 FN-339 Single Base Substitution C-T INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN3574-S.SNP.11:9844602 chr11:009844602 0 W/9844602-9844602 FN3574-S SNP G -> A AC=1;AN=188;BQB=0.948405;DP=3054;DP4=1516,1403,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.02473e-13;MQSB=0.994402;RPB=0.931892;SGB=60.7873;VDB=0.988433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.11:9845988 chr11:009845988 0 W/9845988-9845988 FN3285-S SNP C -> T AC=2;AN=184;BQB=0.99977;DP=2692;DP4=1329,1280,10,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.03705e-14;MQSB=0.952357;RPB=0.297851;SGB=103.004;VDB=0.0174289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.11:9850285 chr11:009850285 0 W/9850285-9850285 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.394869;DP=3212;DP4=1413,1748,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.97314e-10;MQSB=0.994091;RPB=0.928666;SGB=-222.321;VDB=0.695871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.11:9850286 chr11:009850286 0 W/9850286-9850286 FN2082-S SNP C -> A AC=1;AN=168;BQB=0.640849;DP=3223;DP4=1420,1750,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.33221e-13;MQSB=0.997537;RPB=0.978338;SGB=-41.7816;VDB=0.457941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.11:9851443 chr11:009851443 0 W/9851443-9851443 FN1114-S Single Base Substitution C-T INTRON HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3715-S.SNP.11:9851443 chr11:009851443 0 W/9851443-9851443 FN3715-S SNP C -> T AC=2;AN=190;BQB=0.0684269;DP=2466;DP4=1351,980,16,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.91848e-07;MQSB=0.0128806;RPB=0.954598;SGB=112.85;VDB=0.642863;EFF=INTRON(MODIFIER||||187|LOC_Os11g17650|protein_coding|CODING|LOC_Os11g17650.1|2|1) FN3375-S.SNP.11:9854716 chr11:009854716 0 W/9854716-9854716 FN3375-S SNP G -> T AC=1;AN=184;BQB=0.681976;DP=2519;DP4=1149,1240,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.100437;MQB=0.144437;MQSB=8.10143e-07;RPB=0.406356;SGB=-3.85014;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN351-S.SNP.11:9862738 chr11:009862738 0 W/9862738-9862738 FN351-S Single Base Substitution A-G INTRON HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN2424.SNP.11:9865027 chr11:009865027 0 W/9865027-9865027 FN2424 SNP T -> C AC=1;AN=200;BQB=0.926881;DP=4570;DP4=2097,2076,3,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00124402;MQSB=0.464525;RPB=0.565982;SGB=35.8441;VDB=0.560035;EFF=INTRON(MODIFIER||||289|LOC_Os11g17670|protein_coding|CODING|LOC_Os11g17670.1|3|1) FN-78.SNP.11:9872727 chr11:009872727 0 W/9872727-9872727 FN-78 Single Base Substitution C-T INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN2656-S.SNP.11:9873874 chr11:009873874 0 W/9873874-9873874 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.97104;DP=4491;DP4=1993,2170,26,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.41398e-22;MQSB=0.99019;RPB=0.857056;SGB=2.62419;VDB=0.940208;EFF=INTRON(MODIFIER||||1146|LOC_Os11g17690|protein_coding|CODING|LOC_Os11g17690.1|6|1) FN1636-S.SNP.11:9879572 chr11:009879572 0 W/9879572-9879572 FN1636-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g17700 retrotransposon protein, putative, unclassified, expressed SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN2655-S.SNP.11:9884950 chr11:009884950 0 W/9884950-9884950 FN2655-S SNP T -> C AC=2;AN=200;BQB=0.778833;DP=5166;DP4=2386,2493,31,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000774293;MQB=2.77661e-24;MQSB=0.671128;RPB=0.0236584;SGB=64.0657;VDB=0.675591;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.11:9886328 chr11:009886328 0 W/9886328-9886328 FN3923-S SNP G -> A AC=1;AN=158;BQB=0.877126;DP=2940;DP4=1344,1488,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00272109;MQB=0.00239171;MQSB=0.12293;RPB=0.894261;SGB=55.806;VDB=0.943983;EFF=INTERGENIC(MODIFIER||||||||||1) FN710-S.SNP.11:9890785 chr11:009890785 0 W/9890785-9890785 FN710-S Single Base Substitution T-G INTERGENIC HOMO SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN3518-S.SNP.11:9891787 chr11:009891787 0 W/9891787-9891787 FN3518-S SNP C -> A AC=2;AN=188;BQB=0.975236;DP=2561;DP4=1298,1184,14,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.29868e-17;MQSB=0.96172;RPB=0.98482;SGB=56.5957;VDB=0.247092;EFF=INTERGENIC(MODIFIER||||||||||1) FN1625-S.SNP.11:9896751 chr11:009896751 0 W/9896751-9896751 FN1625-S Single Base Substitution A-G UTR_3_PRIME Homo SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.11:9896751 chr11:009896751 0 W/9896751-9896751 FN1626-S SNP A -> G AC=2;AN=188;BQB=0.756204;DP=3417;DP4=1592,1760,24,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.20875e-24;MQSB=0.969151;RPB=0.775043;SGB=115.091;VDB=0.0708665;EFF=UTR_3_PRIME(MODIFIER||142||448|LOC_Os11g17720|protein_coding|CODING|LOC_Os11g17720.1|1|1) FN1448-S.SNP.11:9909122 chr11:009909122 0 W/9909122-9909122 FN1448-S Single Base Substitution C-A INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN427-S.SNP.11:9917967 chr11:009917967 0 W/9917967-9917967 FN427-S Single Base Substitution A-C INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3833-S.SNP.11:9918001 chr11:009918001 0 W/9918001-9918001 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.986845;DP=2682;DP4=1221,1372,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.39017e-09;MQSB=0.152934;RPB=0.205717;SGB=-14.3297;VDB=0.364637;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.11:9925327 chr11:009925327 0 W/9925327-9925327 FN1232-S Single Base Substitution T-C INTRON HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-286.SNP.11:9925905 chr11:009925905 0 W/9925905-9925905 FN-286 Single Base Substitution G-A INTRON HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN3766-S.SNP.11:9930921 chr11:009930921 0 W/9930921-9930921 FN3766-S SNP C -> G AC=2;AN=190;BQB=0.975351;DP=2723;DP4=1264,1354,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.54543e-14;MQSB=0.994851;RPB=0.91796;SGB=90.0802;VDB=0.195342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.11:9930922 chr11:009930922 0 W/9930922-9930922 FN3766-S SNP T -> C AC=2;AN=190;BQB=0.797694;DP=2716;DP4=1259,1380,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15615e-12;MQSB=0.964622;RPB=0.857343;SGB=64.5316;VDB=0.165837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1276-S.SNP.11:9932550 chr11:009932550 0 W/9932550-9932550 FN1276-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN494-S.SNP.11:9939322 chr11:009939322 0 W/9939322-9939322 FN494-S Single Base Substitution G-C INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-299.SNP.11:9942727 chr11:009942727 0 W/9942727-9942727 FN-299 Single Base Substitution T-A INTERGENIC HET SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2723-S.SNP.11:9943259 chr11:009943259 0 W/9943259-9943259 FN2723-S SNP G -> T AC=1;AN=200;BQB=0.637711;DP=4746;DP4=2290,2236,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00105352;MQB=1.39173e-09;MQSB=0.122275;RPB=0.838094;SGB=54.6902;VDB=0.611318;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.11:9949004 chr11:009949004 0 W/9949004-9949004 FN788-S Single Base Substitution A-G INTRON HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN2706-S.SNP.11:9951543 chr11:009951543 0 W/9951543-9951543 FN2706-S SNP C -> G AC=1;AN=200;BQB=0.882996;DP=4923;DP4=2477,2208,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.53928e-07;MQSB=0.998952;RPB=0.782373;SGB=58.8698;VDB=0.733659;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.11:9951637 chr11:009951637 0 W/9951637-9951637 FN2403 SNP C -> T AC=1;AN=200;BQB=0.798899;DP=4456;DP4=2069,2107,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2926e-05;MQSB=0.188563;RPB=0.679279;SGB=40.2696;VDB=0.740922;EFF=INTERGENIC(MODIFIER||||||||||1) FN700-S.SNP.11:9953235 chr11:009953235 0 W/9953235-9953235 FN700-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g17780 retrotransposon, putative, centromere-specific, expressed SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN3591-S.SNP.11:9955194 chr11:009955194 0 W/9955194-9955194 FN3591-S SNP A -> T AC=1;AN=188;BQB=0.784844;DP=2705;DP4=1320,1281,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.79186e-14;MQSB=0.981356;RPB=0.476729;SGB=24.0577;VDB=0.973905;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.11:9956582 chr11:009956582 0 W/9956582-9956582 FN4272-S SNP T -> A AC=1;AN=170;BQB=0.834908;DP=2598;DP4=1355,1149,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.06296e-08;MQSB=0.929268;RPB=0.971588;SGB=52.3148;VDB=0.453757;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.11:9956583 chr11:009956583 0 W/9956583-9956583 FN4272-S SNP T -> A AC=1;AN=170;BQB=0.998706;DP=2593;DP4=1366,1148,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.58201e-10;MQSB=0.897807;RPB=0.909171;SGB=22.3266;VDB=0.421428;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.11:9959624 chr11:009959624 0 W/9959624-9959624 FN953-S Single Base Substitution G-A INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2780-S.SNP.11:9964029 chr11:009964029 0 W/9964029-9964029 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.75612;DP=4268;DP4=1898,1984,14,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71778e-15;MQSB=0.670111;RPB=0.97737;SGB=25.3006;VDB=0.411752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.11:9964030 chr11:009964030 0 W/9964030-9964030 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.932904;DP=4264;DP4=1833,1989,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.96955e-15;MQSB=0.722553;RPB=0.268388;SGB=55.2955;VDB=0.497827;EFF=INTERGENIC(MODIFIER||||||||||1) FN_814-7-1.SNP.11:9964222 chr11:009964222 0 W/9964222-9964222 FN_814-7-1 Single Base Substitution G-A Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN4203-S.SNP.11:9966118 chr11:009966118 0 W/9966118-9966118 FN4203-S SNP A -> T AC=1;AN=170;BQB=0.911505;DP=2325;DP4=1108,1140,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.18108e-06;MQSB=0.969951;RPB=0.989768;SGB=12.556;VDB=0.435867;EFF=INTERGENIC(MODIFIER||||||||||1) FN993-S.SNP.11:9972230 chr11:009972230 0 W/9972230-9972230 FN993-S Single Base Substitution A-C INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN1762-S.SNP.11:9974630 chr11:009974630 0 W/9974630-9974630 FN1762-S SNP T -> G AC=1;AN=188;BQB=0.0329968;DP=2428;DP4=1685,707,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.07017e-05;MQSB=0.903297;RPB=0.31992;SGB=-57.5324;VDB=0.0191547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3854-S.SNP.11:9975111 chr11:009975111 0 W/9975111-9975111 FN3854-S SNP C -> T AC=1;AN=158;BQB=0.699607;DP=1867;DP4=928,842,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00803428;MQB=0.000207495;MQSB=2.87686e-07;RPB=0.947364;SGB=38.3284;VDB=0.262342;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.11:9981274 chr11:009981274 0 W/9981274-9981274 FN1186-S Single Base Substitution G-A INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1135-S.SNP.11:9981774 chr11:009981774 0 W/9981774-9981774 FN1135-S Single Base Substitution G-A INTRON HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN870-S.SNP.11:9986303 chr11:009986303 0 W/9986303-9986303 FN870-S Single Base Substitution T-A INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN1410-S.SNP.11:9988511 chr11:009988511 0 W/9988511-9988511 FN1410-S Single Base Substitution G-A INTRON HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN4084-S.SNP.11:9990261 chr11:009990261 0 W/9990261-9990261 FN4084-S SNP T -> A AC=1;AN=182;BQB=0.98429;DP=2949;DP4=1516,1348,8,3;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00542557;MQB=1.32224e-05;MQSB=0.335242;RPB=0.117674;SGB=44.1115;VDB=0.412316;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S681T|943|LOC_Os11g17840|protein_coding|CODING|LOC_Os11g17840.1|3|1) FN4312-S.SNP.11:9990534 chr11:009990534 0 W/9990534-9990534 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.975234;DP=2312;DP4=1225,1044,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00129758;MQB=1.82025e-06;MQSB=0.971845;RPB=0.0091677;SGB=38.987;VDB=0.279539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V772I|943|LOC_Os11g17840|protein_coding|CODING|LOC_Os11g17840.1|3|1) FN3926-S.SNP.11:9992666 chr11:009992666 0 W/9992666-9992666 FN3926-S SNP A -> C AC=1;AN=158;BQB=0.995401;DP=2268;DP4=1166,874,12,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.1552e-09;MQSB=0.764442;RPB=0.926722;SGB=86.3921;VDB=0.682477;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.11:9992673 chr11:009992673 0 W/9992673-9992673 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.698643;DP=4120;DP4=2069,1507,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.69522e-05;MQSB=1.29709e-08;RPB=0.793862;SGB=40.149;VDB=0.680992;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.11:9993606 chr11:009993606 0 W/9993606-9993606 W360-2S-2 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g17850 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN-304.SNP.11:9995257 chr11:009995257 0 W/9995257-9995257 FN-304 Single Base Substitution G-T INTRON HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN2272-S.SNP.11:9998215 chr11:009998215 0 W/9998215-9998215 FN2272-S SNP C -> A AC=1;AN=190;BQB=0.943249;DP=4956;DP4=2267,2351,14,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.9237e-19;MQSB=0.929013;RPB=0.686707;SGB=-6.57546;VDB=0.25222;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.11:10000303 chr11:010000303 0 W/10000303-10000303 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.630742;DP=2979;DP4=1544,1298,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5286e-09;MQSB=0.953875;RPB=0.700174;SGB=66.8296;VDB=0.0251786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.11:10000304 chr11:010000304 0 W/10000304-10000304 FN3446-S SNP C -> T AC=1;AN=184;BQB=0.994672;DP=2972;DP4=1548,1288,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.63386e-09;MQSB=0.981943;RPB=0.871106;SGB=46.3132;VDB=0.0062008;EFF=INTERGENIC(MODIFIER||||||||||1) FN1480-S.SNP.11:10001303 chr11:010001303 0 W/10001303-10001303 FN1480-S Single Base Substitution C-T INTERGENIC HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN4087-S.SNP.11:10003604 chr11:010003604 0 W/10003604-10003604 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.466723;DP=2676;DP4=1240,1387,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.00298954;MQB=6.46515e-05;MQSB=0.983269;RPB=0.354468;SGB=30.5793;VDB=0.732531;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.11:10004191 chr11:010004191 0 W/10004191-10004191 FN3839-S SNP T -> A AC=1;AN=190;BQB=0.997435;DP=2607;DP4=1170,1349,2,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.2977e-09;MQSB=0.553217;RPB=0.813547;SGB=43.2083;VDB=0.502859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.11:10007987 chr11:010007987 0 W/10007987-10007987 FN2588-S SNP G -> A AC=1;AN=198;BQB=0.708516;DP=4193;DP4=1879,2091,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.05564e-14;MQSB=0.985668;RPB=0.997683;SGB=-7.88458;VDB=0.950068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.11:10015545 chr11:010015545 0 W/10015545-10015545 FN2262-S SNP G -> A AC=1;AN=190;BQB=0.492409;DP=4397;DP4=2059,2034,14,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.25645e-15;MQSB=0.893699;RPB=0.994395;SGB=67.0756;VDB=0.787351;EFF=INTERGENIC(MODIFIER||||||||||1) FN964-S.SNP.11:10027772 chr11:010027772 0 W/10027772-10027772 FN964-S Single Base Substitution G-A INTERGENIC HET SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1712-S.SNP.11:10030050 chr11:010030050 0 W/10030050-10030050 FN1712-S SNP T -> C AC=1;AN=188;BQB=0.541108;DP=3563;DP4=1803,1726,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.86302e-10;MQSB=0.934035;RPB=0.522541;SGB=13.2547;VDB=0.707804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.11:10032727 chr11:010032727 0 W/10032727-10032727 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.968532;DP=2555;DP4=1296,1211,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.28895e-06;MQSB=0.861118;RPB=0.917961;SGB=39.8925;VDB=0.678333;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L159|879|LOC_Os11g17890|protein_coding|CODING|LOC_Os11g17890.1|3|1) FN2403.SNP.11:10044983 chr11:010044983 0 W/10044983-10044983 FN2403 SNP A -> T AC=1;AN=200;BQB=0.12182;DP=4778;DP4=2714,1754,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54346e-06;MQSB=0.999293;RPB=0.974806;SGB=24.2746;VDB=0.961822;EFF=INTRON(MODIFIER||||935|LOC_Os11g17900|protein_coding|CODING|LOC_Os11g17900.1|1|1) FN2609-S.SNP.11:10047806 chr11:010047806 0 W/10047806-10047806 FN2609-S SNP T -> C AC=1;AN=198;BQB=0.862265;DP=4371;DP4=2082,2062,19,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.12029e-19;MQSB=0.771382;RPB=0.78601;SGB=73.4614;VDB=0.305937;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.11:10053709 chr11:010053709 0 W/10053709-10053709 FN486-S Single Base Substitution C-T INTERGENIC HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN627-S.SNP.11:10054737 chr11:010054737 0 W/10054737-10054737 FN627-S Single Base Substitution G-A INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2338.SNP.11:10055323 chr11:010055323 0 W/10055323-10055323 FN2338 SNP C -> T AC=1;AN=192;BQB=0.55594;DP=5074;DP4=2215,2528,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.95973e-14;MQSB=0.992459;RPB=0.887482;SGB=18.3052;VDB=0.591155;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.11:10061087 chr11:010061087 0 W/10061087-10061087 FN-207 Single Base Substitution G-C INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN1619-S.SNP.11:10061702 chr11:010061702 0 W/10061702-10061702 FN1619-S Single Base Substitution G-A INTERGENIC HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN3369-S.SNP.11:10063022 chr11:010063022 0 W/10063022-10063022 FN3369-S SNP A -> G AC=1;AN=184;BQB=0.167961;DP=2595;DP4=1055,1421,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48137e-06;MQSB=0.73858;RPB=0.929994;SGB=39.2697;VDB=0.0735254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.11:10064124 chr11:010064124 0 W/10064124-10064124 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.873097;DP=2746;DP4=1207,1437,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.82106e-07;MQSB=0.863823;RPB=0.968554;SGB=52.1728;VDB=0.928194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.11:10069663 chr11:010069663 0 W/10069663-10069663 FN2334 SNP T -> C AC=1;AN=192;BQB=0.84457;DP=5170;DP4=2426,2533,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.83401e-08;MQSB=0.938182;RPB=0.634681;SGB=31.4783;VDB=0.237599;EFF=UTR_3_PRIME(MODIFIER||396||232|LOC_Os11g17930|protein_coding|CODING|LOC_Os11g17930.1|2|1) FN2300.SNP.11:10073787 chr11:010073787 0 W/10073787-10073787 FN2300 SNP A -> C AC=1;AN=192;BQB=0.751841;DP=4534;DP4=1975,2199,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.92672e-10;MQSB=0.955018;RPB=0.674817;SGB=78.9878;VDB=0.961099;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.11:10074400 chr11:010074400 0 W/10074400-10074400 FN-136 Single Base Substitution C-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-136.SNP.11:10074404 chr11:010074404 0 W/10074404-10074404 FN-136 Single Base Substitution C-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3090-S.SNP.11:10077790 chr11:010077790 0 W/10077790-10077790 FN3090-S SNP A -> C AC=2;AN=184;BQB=0.968846;DP=2816;DP4=1294,1315,8,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.40741e-11;MQSB=0.846525;RPB=0.581241;SGB=63.9222;VDB=0.989018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-180.SNP.11:10082376 chr11:010082376 0 W/10082376-10082376 FN-180 Single Base Substitution C-G INTRON HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN3867-S.SNP.11:10086306 chr11:010086306 0 W/10086306-10086306 FN3867-S SNP G -> A AC=1;AN=158;BQB=0.9941;DP=2462;DP4=1205,1157,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.24497e-06;MQSB=0.321613;RPB=0.978038;SGB=20.5959;VDB=0.315765;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.11:10093089 chr11:010093089 0 W/10093089-10093089 FN2754-S SNP C -> T AC=1;AN=200;BQB=0.783712;DP=4937;DP4=2387,2308,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.2956e-10;MQSB=1;RPB=0.697975;SGB=24.2746;VDB=0.163136;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.11:10093240 chr11:010093240 0 W/10093240-10093240 FN2188-S SNP G -> C AC=1;AN=190;BQB=0.996081;DP=4568;DP4=2206,2061,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.46638e-08;MQSB=0.0118591;RPB=0.399652;SGB=28.7675;VDB=0.460445;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.11:10099862 chr11:010099862 0 W/10099862-10099862 FN1520-S Single Base Substitution A-T INTRON HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3381-S.SNP.11:10100357 chr11:010100357 0 W/10100357-10100357 FN3381-S SNP T -> A AC=1;AN=184;BQB=0.860629;DP=3175;DP4=1365,1659,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30501e-05;MQSB=0.888002;RPB=0.277564;SGB=57.786;VDB=0.438147;EFF=INTRON(MODIFIER||||603|LOC_Os11g17970|protein_coding|CODING|LOC_Os11g17970.1|2|1) FN3848-S.SNP.11:10107870 chr11:010107870 0 W/10107870-10107870 FN3848-S SNP G -> T AC=1;AN=158;BQB=0.993475;DP=2421;DP4=1207,1146,11,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00495663;MQB=9.26889e-09;MQSB=0.150134;RPB=0.858807;SGB=44.1818;VDB=0.578992;EFF=INTERGENIC(MODIFIER||||||||||1) FN2551-S.SNP.11:10108887 chr11:010108887 0 W/10108887-10108887 FN2551-S SNP T -> G AC=1;AN=198;BQB=0.554374;DP=4263;DP4=2056,1984,13,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.80343e-17;MQSB=0.998379;RPB=0.193903;SGB=132.261;VDB=0.515643;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q1127H|1323|LOC_Os11g17990|protein_coding|CODING|LOC_Os11g17990.1|7|1) FN3434-S.SNP.11:10109410 chr11:010109410 0 W/10109410-10109410 FN3434-S SNP A -> G AC=2;AN=184;BQB=0.99684;DP=2741;DP4=1344,1281,17,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.9134e-16;MQSB=0.670542;RPB=0.479762;SGB=125.613;VDB=0.766551;EFF=INTRON(MODIFIER||||1323|LOC_Os11g17990|protein_coding|CODING|LOC_Os11g17990.1|6|1) FN1606-S.SNP.11:10111159 chr11:010111159 0 W/10111159-10111159 FN1606-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g17990 retrotransposon protein, putative, unclassified, expressed SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN1630-S.SNP.11:10111933 chr11:010111933 0 W/10111933-10111933 FN1630-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g17990 retrotransposon protein, putative, unclassified, expressed SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1319-S.SNP.11:10112687 chr11:010112687 0 W/10112687-10112687 FN1319-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g17990 retrotransposon protein, putative, unclassified, expressed SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2465.SNP.11:10113851 chr11:010113851 0 W/10113851-10113851 FN2465 SNP G -> A AC=1;AN=200;BQB=0.456966;DP=4615;DP4=2032,2206,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.38106e-13;MQSB=0.685628;RPB=0.270646;SGB=50.3263;VDB=0.363577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.11:10115863 chr11:010115863 0 W/10115863-10115863 FN3528-S SNP T -> C AC=1;AN=188;BQB=0.966864;DP=2623;DP4=1157,1372,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.99551e-14;MQSB=0.945086;RPB=0.985472;SGB=67.8739;VDB=0.63359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.11:10120804 chr11:010120804 0 W/10120804-10120804 FN2555-S SNP C -> T AC=1;AN=198;BQB=0.983532;DP=3812;DP4=1837,1810,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.46519e-09;MQSB=0.387953;RPB=0.967876;SGB=72.5245;VDB=0.760911;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.11:10124138 chr11:010124138 0 W/10124138-10124138 FN519-S Single Base Substitution C-T INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN-394.SNP.11:10140633 chr11:010140633 0 W/10140633-10140633 FN-394 Single Base Substitution G-T INTRON HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1284-S.SNP.11:10154742 chr11:010154742 0 W/10154742-10154742 FN1284-S Single Base Substitution G-A INTERGENIC HET SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN-39.SNP.11:10156519 chr11:010156519 0 W/10156519-10156519 FN-39 Single Base Substitution G-A INTERGENIC Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN3389-S.SNP.11:10158176 chr11:010158176 0 W/10158176-10158176 FN3389-S SNP G -> C AC=2;AN=184;BQB=0.975818;DP=3484;DP4=1352,2000,13,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.3702e-22;MQSB=1;RPB=0.980924;SGB=166.309;VDB=0.441141;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q156E|487|LOC_Os11g18070|protein_coding|CODING|LOC_Os11g18070.1|3|1) FN3537-S.SNP.11:10160124 chr11:010160124 0 W/10160124-10160124 FN3537-S SNP C -> A AC=1;AN=188;BQB=0.862848;DP=3284;DP4=1396,1815,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.38185e-10;MQSB=0.998542;RPB=0.961169;SGB=85.3253;VDB=0.83221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.11:10164562 chr11:010164562 0 W/10164562-10164562 FN2462 SNP C -> A AC=1;AN=200;BQB=0.857483;DP=4538;DP4=2090,2156,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.03201e-05;MQSB=0.947278;RPB=0.606691;SGB=22.2439;VDB=0.0285745;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.11:10168303 chr11:010168303 0 W/10168303-10168303 FN2591-S SNP C -> T AC=1;AN=198;BQB=0.653057;DP=4217;DP4=1806,2208,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.0397e-08;MQSB=0.981065;RPB=0.99997;SGB=36.5539;VDB=0.704797;EFF=INTRON(MODIFIER||||332|LOC_Os11g18080|protein_coding|CODING|LOC_Os11g18080.1|1|1) FN3572-S.SNP.11:10171207 chr11:010171207 0 W/10171207-10171207 FN3572-S SNP C -> T AC=2;AN=188;BQB=0.73221;DP=2465;DP4=1037,1359,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.4387e-12;MQSB=0.9492;RPB=0.749687;SGB=89.8686;VDB=0.0260666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3572-S.SNP.11:10171209 chr11:010171209 0 W/10171209-10171209 FN3572-S SNP G -> A AC=2;AN=188;BQB=0.908985;DP=2454;DP4=1033,1356,12,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.93192e-14;MQSB=0.991934;RPB=0.783723;SGB=89.8686;VDB=0.00536167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.11:10175029 chr11:010175029 0 W/10175029-10175029 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.933704;DP=5017;DP4=2375,2407,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.25353e-13;MQSB=0.857862;RPB=0.420992;SGB=42.5108;VDB=0.45333;EFF=INTERGENIC(MODIFIER||||||||||1) FN-118.SNP.11:10184903 chr11:010184903 0 W/10184903-10184903 FN-118 Single Base Substitution G-A INTERGENIC HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN3282-S.SNP.11:10186879 chr11:010186879 0 W/10186879-10186879 FN3282-S SNP G -> T AC=1;AN=184;BQB=0.852946;DP=3591;DP4=1412,2061,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000278474;MQB=6.45789e-12;MQSB=0.929096;RPB=0.0675131;SGB=-12.6269;VDB=0.330637;EFF=INTRON(MODIFIER||||569|LOC_Os11g18110|protein_coding|CODING|LOC_Os11g18110.1|2|1) FN3966-S.SNP.11:10187141 chr11:010187141 0 W/10187141-10187141 FN3966-S SNP T -> C AC=1;AN=168;BQB=0.921471;DP=2314;DP4=1121,1081,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.30555e-06;MQSB=0.96438;RPB=0.229392;SGB=38.8805;VDB=0.395899;EFF=INTRON(MODIFIER||||569|LOC_Os11g18110|protein_coding|CODING|LOC_Os11g18110.1|2|1) FN2788-S.SNP.11:10189601 chr11:010189601 0 W/10189601-10189601 FN2788-S SNP G -> T AC=1;AN=198;BQB=0.567254;DP=4257;DP4=1862,2134,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000939629;MQB=1.37403e-12;MQSB=0.00854558;RPB=0.833873;SGB=83.2905;VDB=0.564851;EFF=INTRON(MODIFIER||||569|LOC_Os11g18110|protein_coding|CODING|LOC_Os11g18110.1|6|1) FN3371-S.SNP.11:10190420 chr11:010190420 0 W/10190420-10190420 FN3371-S SNP C -> T AC=2;AN=184;BQB=0.64258;DP=3037;DP4=1330,1590,9,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.17067e-14;MQSB=0.824796;RPB=0.924537;SGB=81.5311;VDB=0.600894;EFF=INTRON(MODIFIER||||569|LOC_Os11g18110|protein_coding|CODING|LOC_Os11g18110.1|6|1) FN3818-S.SNP.11:10194044 chr11:010194044 0 W/10194044-10194044 FN3818-S SNP A -> T AC=2;AN=190;BQB=0.972462;DP=2591;DP4=1183,1276,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13271e-12;MQSB=0.893562;RPB=0.859139;SGB=75.1932;VDB=0.920587;EFF=INTERGENIC(MODIFIER||||||||||1) FN4073-S.SNP.11:10194044 chr11:010194044 0 W/10194044-10194044 FN4073-S SNP A -> T AC=2;AN=182;BQB=0.961897;DP=3024;DP4=1376,1517,15,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.47832e-14;MQSB=0.973369;RPB=0.230765;SGB=111.774;VDB=0.159737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.11:10196191 chr11:010196191 0 W/10196191-10196191 FN2562-S SNP T -> G AC=1;AN=198;BQB=0.982647;DP=4080;DP4=2035,1781,20,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.77037e-17;MQSB=0.995512;RPB=0.923314;SGB=104.861;VDB=0.876427;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acG|T7|1014|LOC_Os11g18120|protein_coding|CODING|LOC_Os11g18120.1|1|1) FN3297-S.SNP.11:10199521 chr11:010199521 0 W/10199521-10199521 FN3297-S SNP T -> C AC=1;AN=184;BQB=0.999633;DP=2716;DP4=1358,1284,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=9.86657e-05;MQSB=1.30375e-08;RPB=0.697634;SGB=39.2697;VDB=0.87967;EFF=INTRON(MODIFIER||||1014|LOC_Os11g18120|protein_coding|CODING|LOC_Os11g18120.1|8|1) FN1282-S.SNP.11:10204655 chr11:010204655 0 W/10204655-10204655 FN1282-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g18130 expressed protein SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2203-S.SNP.11:10220651 chr11:010220651 0 W/10220651-10220651 FN2203-S SNP A -> C AC=1;AN=190;BQB=0.8715;DP=5071;DP4=2466,2297,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.34399e-09;MQSB=0.916141;RPB=0.722274;SGB=39.6545;VDB=0.730398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1472-S.SNP.11:10230926 chr11:010230926 0 W/10230926-10230926 FN1472-S Single Base Substitution G-C INTRON HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2602-S.SNP.11:10238573 chr11:010238573 0 W/10238573-10238573 FN2602-S SNP C -> T AC=2;AN=198;BQB=0.917207;DP=4163;DP4=1976,1908,18,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.08079e-21;MQSB=0.713579;RPB=0.611309;SGB=-0.743142;VDB=0.417218;EFF=INTRON(MODIFIER||||760|LOC_Os11g18194|protein_coding|CODING|LOC_Os11g18194.1|15|1) FN1373-S.SNP.11:10244442 chr11:010244442 0 W/10244442-10244442 FN1373-S Single Base Substitution G-A INTRON Homo SNo: 1161, Mutant_ID: FN1373-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN598-S.SNP.11:10244604 chr11:010244604 0 W/10244604-10244604 FN598-S Single Base Substitution T-C INTRON HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2330.SNP.11:10245248 chr11:010245248 0 W/10245248-10245248 FN2330 SNP G -> A AC=1;AN=192;BQB=0.600115;DP=4941;DP4=2266,2323,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.54567e-14;MQSB=0.862566;RPB=0.771082;SGB=86.1165;VDB=0.670917;EFF=INTRON(MODIFIER||||760|LOC_Os11g18194|protein_coding|CODING|LOC_Os11g18194.1|8|1) FN2549-S.SNP.11:10254338 chr11:010254338 0 W/10254338-10254338 FN2549-S SNP T -> G AC=1;AN=198;BQB=0.534097;DP=4286;DP4=2051,2018,2,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.51698e-05;MQSB=0.982327;RPB=0.986785;SGB=8.58354;VDB=0.523195;EFF=INTRON(MODIFIER||||760|LOC_Os11g18194|protein_coding|CODING|LOC_Os11g18194.1|5|1) FN3800-S.SNP.11:10255085 chr11:010255085 0 W/10255085-10255085 FN3800-S SNP T -> G AC=1;AN=190;BQB=0.999463;DP=2692;DP4=1376,1178,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.38644e-09;MQSB=0.972514;RPB=0.33601;SGB=46.7622;VDB=0.208075;EFF=INTRON(MODIFIER||||760|LOC_Os11g18194|protein_coding|CODING|LOC_Os11g18194.1|5|1) FN-226.SNP.11:10264519 chr11:010264519 0 W/10264519-10264519 FN-226 Single Base Substitution T-A INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN-142.SNP.11:10265783 chr11:010265783 0 W/10265783-10265783 FN-142 Single Base Substitution C-G INTRON HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN4311-S.SNP.11:10277595 chr11:010277595 0 W/10277595-10277595 FN4311-S SNP G -> A AC=1;AN=170;BQB=0.149182;DP=2065;DP4=1060,902,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.45513e-06;MQSB=0.00439392;RPB=0.901079;SGB=-18.3175;VDB=0.314843;EFF=INTERGENIC(MODIFIER||||||||||1) FN-349.SNP.11:10278165 chr11:010278165 0 W/10278165-10278165 FN-349 Single Base Substitution G-C INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN321-S.SNP.11:10278393 chr11:010278393 0 W/10278393-10278393 FN321-S Single Base Substitution G-A INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1070-S.SNP.11:10280664 chr11:010280664 0 W/10280664-10280664 FN1070-S Single Base Substitution G-A INTRON HET SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3994-S.SNP.11:10280757 chr11:010280757 0 W/10280757-10280757 FN3994-S SNP T -> G AC=1;AN=168;BQB=0.98214;DP=2371;DP4=1214,1030,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.32764e-08;MQSB=0.855926;RPB=0.987584;SGB=2.75988;VDB=0.318137;EFF=INTRON(MODIFIER||||854|LOC_Os11g18240|protein_coding|CODING|LOC_Os11g18240.1|1|1) FN439-S.SNP.11:10281484 chr11:010281484 0 W/10281484-10281484 FN439-S Single Base Substitution C-T INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1150-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN1150-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1335-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN1335-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1647-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN1647-S Single Base Substitution G-A INTERGENIC Homo SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN1692-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN1692-S SNP G -> A AC=2;AN=188;BQB=0.650537;DP=2127;DP4=1089,987,15,10;HOB=0.0210502;ICB=0.494738;MQ=25;MQ0F=0.190409;MQB=0.34698;MQSB=1.05929e-06;RPB=0.116753;SGB=-39.6481;VDB=0.553031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN2220-S SNP G -> A AC=2;AN=190;BQB=0.265617;DP=4460;DP4=1931,2064,33,27;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0284753;MQB=0.000224178;MQSB=0.870203;RPB=0.402015;SGB=-184.159;VDB=0.210971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN2347 SNP G -> A AC=2;AN=192;BQB=0.599159;DP=4958;DP4=2313,2208,28,34;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0.0240016;MQB=5.15923e-06;MQSB=0.386314;RPB=0.250245;SGB=-321.604;VDB=0.927505;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN2589-S SNP G -> A AC=2;AN=198;BQB=0.998819;DP=4378;DP4=2041,2061,17,16;HOB=0.019998;ICB=0.495001;MQ=38;MQ0F=0.0386021;MQB=0.0781465;MQSB=0.756238;RPB=0.986718;SGB=70.8662;VDB=0.441928;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN3105-S SNP G -> A AC=2;AN=184;BQB=0.978365;DP=3128;DP4=1606,1439,10,9;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0.0415601;MQB=0.0382902;MQSB=1.99447e-20;RPB=0.438358;SGB=56.8786;VDB=0.164595;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN4135-S SNP G -> A AC=2;AN=182;BQB=0.995763;DP=3136;DP4=1638,1430,11,16;HOB=0.0217365;ICB=0.494567;MQ=39;MQ0F=0.0404974;MQB=0.0176343;MQSB=8.88899e-18;RPB=0.89239;SGB=53.2744;VDB=0.71913;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.11:10286058 chr11:010286058 0 W/10286058-10286058 FN4240-S SNP G -> A AC=2;AN=170;BQB=0.999253;DP=2511;DP4=1282,1157,12,12;HOB=0.0232526;ICB=0.494188;MQ=38;MQ0F=0.0457985;MQB=0.00602351;MQSB=1.21523e-12;RPB=0.773456;SGB=101.184;VDB=0.550454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.11:10288065 chr11:010288065 0 W/10288065-10288065 FN3930-S SNP C -> A AC=1;AN=158;BQB=0.605777;DP=1928;DP4=770,1024,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000518672;MQB=6.45935e-05;MQSB=0.00416219;RPB=0.991885;SGB=27.3346;VDB=0.176923;EFF=INTRON(MODIFIER||||378|LOC_Os11g18250|protein_coding|CODING|LOC_Os11g18250.1|1|1) FN3639-S.SNP.11:10289692 chr11:010289692 0 W/10289692-10289692 FN3639-S SNP G -> T AC=2;AN=190;BQB=0.991786;DP=2869;DP4=1257,1502,10,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.12991e-11;MQSB=0.998478;RPB=0.839285;SGB=80.9724;VDB=0.949903;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.11:10292514 chr11:010292514 0 W/10292514-10292514 FN3858-S SNP C -> A AC=1;AN=158;BQB=0.954707;DP=1585;DP4=729,699,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000856614;MQSB=0.94176;RPB=0.961494;SGB=25.2211;VDB=0.380378;EFF=INTRON(MODIFIER||||340|LOC_Os11g18260|protein_coding|CODING|LOC_Os11g18260.1|1|1) FN1227-S.SNP.11:10293464 chr11:010293464 0 W/10293464-10293464 FN1227-S Single Base Substitution G-A INTRON HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-189.SNP.11:10294592 chr11:010294592 0 W/10294592-10294592 FN-189 Single Base Substitution C-G INTERGENIC HOMO SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-48.SNP.11:10296594 chr11:010296594 0 W/10296594-10296594 FN-48 Single Base Substitution A-T INTRON Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN4185-S.SNP.11:10300740 chr11:010300740 0 W/10300740-10300740 FN4185-S SNP G -> A AC=1;AN=170;BQB=0.987293;DP=2492;DP4=1207,1204,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00321027;MQB=3.04774e-08;MQSB=0.477007;RPB=0.538541;SGB=52.3148;VDB=0.35082;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S1333|1401|LOC_Os11g18290|protein_coding|CODING|LOC_Os11g18290.1|8|1) FN3425-S.SNP.11:10303567 chr11:010303567 0 W/10303567-10303567 FN3425-S SNP G -> A AC=1;AN=184;BQB=0.990445;DP=3440;DP4=1723,1644,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.53526e-06;MQSB=0.920945;RPB=0.981914;SGB=44.2207;VDB=0.176923;EFF=INTRON(MODIFIER||||1401|LOC_Os11g18290|protein_coding|CODING|LOC_Os11g18290.1|5|1) FN672-S.SNP.11:10306235 chr11:010306235 0 W/10306235-10306235 FN672-S Single Base Substitution C-T SPLICE_SITE_ACCEPTOR HET LOC_Os11g18290 retrotransposon protein, putative, unclassified, expressed SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3937-S.SNP.11:10308149 chr11:010308149 0 W/10308149-10308149 FN3937-S SNP C -> T AC=1;AN=158;BQB=0.981896;DP=2296;DP4=1029,1126,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.6676e-06;MQSB=0.47056;RPB=0.942459;SGB=23.9652;VDB=0.726254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.11:10323665 chr11:010323665 0 W/10323665-10323665 FN3567-S SNP T -> C AC=2;AN=188;BQB=0.978434;DP=2611;DP4=1214,1295,23,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.25504e-22;MQSB=0.988497;RPB=0.709851;SGB=125.373;VDB=0.147025;EFF=INTERGENIC(MODIFIER||||||||||1) FN926-S.SNP.11:10325938 chr11:010325938 0 W/10325938-10325938 FN926-S Single Base Substitution G-A INTERGENIC HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN-291.SNP.11:10329231 chr11:010329231 0 W/10329231-10329231 FN-291 Single Base Substitution T-C INTERGENIC HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1712-S.SNP.11:10335076 chr11:010335076 0 W/10335076-10335076 FN1712-S SNP G -> A AC=1;AN=188;BQB=0.631933;DP=3959;DP4=2109,1820,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.03137e-09;MQSB=0.666885;RPB=0.989406;SGB=-13.9132;VDB=0.827646;EFF=INTRON(MODIFIER||||52|LOC_Os11g18320|protein_coding|CODING|LOC_Os11g18320.2|1|1) FN_N1-119-1.SNP.11:10335318 chr11:010335318 0 W/10335318-10335318 FN_N1-119-1 Single Base Substitution G-A Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN1512-S.SNP.11:10338458 chr11:010338458 0 W/10338458-10338458 FN1512-S Single Base Substitution T-G SPLICE_SITE_REGION HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1512-S.SNP.11:10339786 chr11:010339786 0 W/10339786-10339786 FN1512-S Single Base Substitution C-A INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN4230-S.SNP.11:10345956 chr11:010345956 0 W/10345956-10345956 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.899941;DP=2464;DP4=1238,1156,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.70387e-06;MQSB=0.864255;RPB=0.73564;SGB=34.5445;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.11:10354042 chr11:010354042 0 W/10354042-10354042 W500-4-7-1 Single Base Substitution G-A INTRON HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN2692-S.SNP.11:10354476 chr11:010354476 0 W/10354476-10354476 FN2692-S SNP C -> A AC=1;AN=200;BQB=0.905315;DP=4483;DP4=2076,2139,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32714e-12;MQSB=0.796056;RPB=0.60194;SGB=95.7111;VDB=0.163246;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|15|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|14|1) FN2555-S.SNP.11:10355189 chr11:010355189 0 W/10355189-10355189 FN2555-S SNP G -> C AC=1;AN=198;BQB=0.491803;DP=4070;DP4=2199,1651,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22468e-06;MQSB=0.791925;RPB=0.518511;SGB=32.9588;VDB=0.204983;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|15|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|14|1) FN3488-S.SNP.11:10365954 chr11:010365954 0 W/10365954-10365954 FN3488-S SNP G -> T AC=2;AN=184;BQB=0.668229;DP=2107;DP4=961,1057,9,2;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.41285e-05;MQSB=0.93997;RPB=0.674105;SGB=44.2207;VDB=0.885234;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|2|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|2|1),INTRON(MODIFIER||||281|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.4|2|1) FN1346-S.SNP.11:10367644 chr11:010367644 0 W/10367644-10367644 FN1346-S Single Base Substitution C-A INTRON HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN4302-S.SNP.11:10370140 chr11:010370140 0 W/10370140-10370140 FN4302-S SNP C -> T AC=1;AN=170;BQB=0.6295;DP=2439;DP4=1004,1334,7,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.87515e-09;MQSB=0.984939;RPB=0.988876;SGB=58.9766;VDB=0.988896;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|1|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|1|1),INTRON(MODIFIER||||281|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.4|1|1) FN4038-S.SNP.11:10370491 chr11:010370491 0 W/10370491-10370491 FN4038-S SNP A -> T AC=2;AN=168;BQB=0.401469;DP=2489;DP4=1239,1027,29,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.87964e-28;MQSB=0.570116;RPB=0.996765;SGB=181.293;VDB=0.0355314;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|1|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|1|1),INTRON(MODIFIER||||281|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.4|1|1) FN486-S.SNP.11:10372372 chr11:010372372 0 W/10372372-10372372 FN486-S Single Base Substitution T-A INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN2418.SNP.11:10373592 chr11:010373592 0 W/10373592-10373592 FN2418 SNP A -> C AC=1;AN=200;BQB=0.364519;DP=3862;DP4=2060,1338,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000258933;MQB=4.06375e-06;MQSB=0.557294;RPB=0.221427;SGB=-34.5259;VDB=0.441138;EFF=INTRON(MODIFIER||||617|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.2|1|1),INTRON(MODIFIER||||554|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.3|1|1),INTRON(MODIFIER||||281|LOC_Os11g18366|protein_coding|CODING|LOC_Os11g18366.4|1|1) FN762-S.SNP.11:10374564 chr11:010374564 0 W/10374564-10374564 FN762-S Single Base Substitution G-A INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN762-S.SNP.11:10374565 chr11:010374565 0 W/10374565-10374565 FN762-S Single Base Substitution G-A INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1440-S.SNP.11:10377103 chr11:010377103 0 W/10377103-10377103 FN1440-S Single Base Substitution G-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN-116.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN-116 Single Base Substitution G-A INTERGENIC HOMO SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN-73.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN-73 Single Base Substitution G-A INTERGENIC HOMO SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN1572-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN1572-S Single Base Substitution G-A INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN1655-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN1655-S Single Base Substitution G-A INTERGENIC Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN2149-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN2149-S SNP G -> A AC=2;AN=168;BQB=0.989648;DP=4272;DP4=1728,2468,15,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.79265e-19;MQSB=0.244686;RPB=0.638459;SGB=39.9611;VDB=0.0291434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN2322 SNP G -> A AC=2;AN=192;BQB=0.785992;DP=4819;DP4=1951,2622,12,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.30581e-19;MQSB=0.431745;RPB=0.944567;SGB=-2.35301;VDB=0.135458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2411.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN2411 SNP G -> A AC=2;AN=200;BQB=0.765161;DP=4287;DP4=1442,2607,22,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.93749e-28;MQSB=0.218431;RPB=0.759446;SGB=243.077;VDB=0.146569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN2675-S SNP G -> A AC=2;AN=200;BQB=0.251409;DP=4817;DP4=1919,2661,26,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.3638e-32;MQSB=0.293492;RPB=0.947732;SGB=136.297;VDB=0.1521;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN3366-S SNP G -> A AC=2;AN=184;BQB=0.995772;DP=3054;DP4=1350,1584,19,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.68851e-17;MQSB=0.0615125;RPB=0.919847;SGB=139.178;VDB=0.225937;EFF=INTERGENIC(MODIFIER||||||||||1) FN3948-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN3948-S SNP G -> A AC=2;AN=168;BQB=0.99498;DP=2567;DP4=1011,1434,16,32;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.01209e-22;MQSB=0.0203426;RPB=0.849282;SGB=201.845;VDB=0.330631;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN461-S Single Base Substitution G-A INTERGENIC HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN482-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN482-S Single Base Substitution G-A INTERGENIC HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN564-S.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN564-S Single Base Substitution G-A INTERGENIC HOMO SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN_552-1-1.SNP.11:10378174 chr11:010378174 0 W/10378174-10378174 FN_552-1-1 Single Base Substitution G-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN1675-S.SNP.11:10379172 chr11:010379172 0 W/10379172-10379172 FN1675-S SNP T -> A AC=1;AN=188;BQB=0.00152248;DP=2495;DP4=1103,1352,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.23626e-05;MQSB=0.841873;RPB=0.897901;SGB=-15.5431;VDB=0.217394;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T83S|90|LOC_Os11g18382|protein_coding|CODING|LOC_Os11g18382.1|3|1) FN3513-S.SNP.11:10385265 chr11:010385265 0 W/10385265-10385265 FN3513-S SNP T -> A AC=1;AN=188;BQB=0.539814;DP=2946;DP4=1440,1412,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00407332;MQB=0.0826972;MQSB=8.86327e-09;RPB=0.964093;SGB=13.3597;VDB=0.786011;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.11:10385630 chr11:010385630 0 W/10385630-10385630 FN962-S Single Base Substitution G-A INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN4208-S.SNP.11:10386862 chr11:010386862 0 W/10386862-10386862 FN4208-S SNP A -> T AC=1;AN=170;BQB=0.996221;DP=2451;DP4=943,1341,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0273358;MQB=0.780665;MQSB=0.119232;RPB=0.167158;SGB=34.5445;VDB=0.380722;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.11:10387219 chr11:010387219 0 W/10387219-10387219 FN4150-S SNP C -> G AC=1;AN=170;BQB=0.927399;DP=2106;DP4=1007,1015,13,9;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00379867;MQB=1.12843e-06;MQSB=0.920836;RPB=0.120207;SGB=39.4251;VDB=0.0282685;EFF=INTERGENIC(MODIFIER||||||||||1) FN428-S.SNP.11:10387381 chr11:010387381 0 W/10387381-10387381 FN428-S Single Base Substitution C-T INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3452-S.SNP.11:10390209 chr11:010390209 0 W/10390209-10390209 FN3452-S SNP G -> T AC=2;AN=184;BQB=0.714094;DP=2718;DP4=1351,1274,15,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.53532e-12;MQSB=0.906262;RPB=0.866864;SGB=70.9657;VDB=0.291935;EFF=INTRON(MODIFIER||||493|LOC_Os11g18410|protein_coding|CODING|LOC_Os11g18410.1|1|1) FN439-S.SNP.11:10399675 chr11:010399675 0 W/10399675-10399675 FN439-S Single Base Substitution C-T INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1645-S.SNP.11:10400924 chr11:010400924 0 W/10400924-10400924 FN1645-S Single Base Substitution C-T INTRON HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN-227.SNP.11:10404950 chr11:010404950 0 W/10404950-10404950 FN-227 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN1202-S.SNP.11:10406911 chr11:010406911 0 W/10406911-10406911 FN1202-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1585-S.SNP.11:10407373 chr11:010407373 0 W/10407373-10407373 FN1585-S Single Base Substitution C-A INTERGENIC Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1363-S.SNP.11:10416271 chr11:010416271 0 W/10416271-10416271 FN1363-S Single Base Substitution T-C INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN868-S.SNP.11:10417832 chr11:010417832 0 W/10417832-10417832 FN868-S Single Base Substitution C-A INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN3817-S.SNP.11:10420006 chr11:010420006 0 W/10420006-10420006 FN3817-S SNP G -> T AC=1;AN=190;BQB=0.986665;DP=3165;DP4=1548,1495,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.20735e-07;MQSB=0.997306;RPB=0.107169;SGB=25.439;VDB=0.0772601;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P253Q|309|LOC_Os11g18480|protein_coding|CODING|LOC_Os11g18480.1|3|1) FN1003-S.SNP.11:10420883 chr11:010420883 0 W/10420883-10420883 FN1003-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g18480 retrotransposon protein, putative, unclassified, expressed SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN2328.SNP.11:10425468 chr11:010425468 0 W/10425468-10425468 FN2328 SNP C -> T AC=2;AN=192;BQB=0.172815;DP=4775;DP4=2081,2349,37,41;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.17289e-41;MQSB=0.990347;RPB=0.967393;SGB=127.133;VDB=0.406647;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.11:10425494 chr11:010425494 0 W/10425494-10425494 FN2584-S SNP G -> A AC=1;AN=198;BQB=0.839527;DP=4441;DP4=2036,2202,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.47536e-14;MQSB=0.999999;RPB=0.853856;SGB=127.666;VDB=0.248971;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.11:10433576 chr11:010433576 0 W/10433576-10433576 FN973-S Single Base Substitution A-G INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN576-S.SNP.11:10435995 chr11:010435995 0 W/10435995-10435995 FN576-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g18510 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN_N1-169-1.SNP.11:10436647 chr11:010436647 0 W/10436647-10436647 FN_N1-169-1 Single Base Substitution C-A Homo LOC_Os11g18510 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN1700-S.SNP.11:10437843 chr11:010437843 0 W/10437843-10437843 FN1700-S SNP C -> A AC=2;AN=188;BQB=0.889655;DP=2232;DP4=1179,1010,12,11;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.00851254;MQB=0.099261;MQSB=0.0830241;RPB=0.436771;SGB=16.3413;VDB=0.178484;EFF=INTRON(MODIFIER||||673|LOC_Os11g18510|protein_coding|CODING|LOC_Os11g18510.1|3|1) FN3552-S.SNP.11:10438391 chr11:010438391 0 W/10438391-10438391 FN3552-S SNP G -> T AC=2;AN=188;BQB=0.969521;DP=2953;DP4=1366,1526,7,14;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0152387;MQB=0.216609;MQSB=0.413829;RPB=0.993354;SGB=89.8686;VDB=0.0842381;EFF=INTRON(MODIFIER||||673|LOC_Os11g18510|protein_coding|CODING|LOC_Os11g18510.1|3|1) 701-6.SNP.11:10438935 chr11:010438935 0 W/10438935-10438935 701-6 Single Base Substitution G-A INTERGENIC Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN2688-S.SNP.11:10443931 chr11:010443931 0 W/10443931-10443931 FN2688-S SNP G -> T AC=1;AN=200;BQB=0.471009;DP=4882;DP4=2535,1976,14,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76869e-10;MQSB=0.970132;RPB=0.0273294;SGB=65.5058;VDB=0.324522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1486-S.SNP.11:10444927 chr11:010444927 0 W/10444927-10444927 FN1486-S Single Base Substitution A-T INTERGENIC HET SNo: 1250, Mutant_ID: FN1486-S, Generation: M2, Mutations: 80, Genes: 92, Seed availability: Yes. FN1712-S.SNP.11:10449326 chr11:010449326 0 W/10449326-10449326 FN1712-S SNP G -> T AC=2;AN=188;BQB=0.317255;DP=2199;DP4=1092,1075,12,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.74184e-07;MQSB=0.968199;RPB=0.993985;SGB=7.0815;VDB=0.480398;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A64|221|LOC_Os11g18540|protein_coding|CODING|LOC_Os11g18540.1|1|1) FN3711-S.SNP.11:10451871 chr11:010451871 0 W/10451871-10451871 FN3711-S SNP A -> G AC=2;AN=190;BQB=0.623136;DP=3136;DP4=1345,1688,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.52863e-16;MQSB=0.990049;RPB=0.812603;SGB=126.511;VDB=0.523605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.11:10451920 chr11:010451920 0 W/10451920-10451920 FN2792-S SNP T -> C AC=1;AN=198;BQB=0.996359;DP=4518;DP4=2256,2074,9,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.33513e-14;MQSB=0.999959;RPB=0.870078;SGB=47.5102;VDB=0.0665623;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.11:10455773 chr11:010455773 0 W/10455773-10455773 FN2181-S SNP C -> G AC=1;AN=190;BQB=0.999551;DP=2699;DP4=248,2272,1,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57973e-05;MQSB=8.6386e-15;RPB=0.186265;SGB=35.4339;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN2494.SNP.11:10457090 chr11:010457090 0 W/10457090-10457090 FN2494 SNP G -> T AC=1;AN=200;BQB=0.733337;DP=4169;DP4=1927,2047,5,7;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0443752;MQB=0.905612;MQSB=0;RPB=0.992126;SGB=33.0593;VDB=0.38912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V189F|1011|LOC_Os11g18550|protein_coding|CODING|LOC_Os11g18550.1|1|1) FN2381.SNP.11:10470149 chr11:010470149 0 W/10470149-10470149 FN2381 SNP A -> G AC=1;AN=192;BQB=0.581393;DP=5098;DP4=2565,2303,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=5.60835e-05;MQSB=0.120402;RPB=0.450704;SGB=28.9139;VDB=0.260754;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.11:10471794 chr11:010471794 0 W/10471794-10471794 FN3342-S SNP G -> C AC=1;AN=184;BQB=0.994532;DP=2864;DP4=1481,1231,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.23795e-07;MQSB=0.998353;RPB=0.0495653;SGB=44.2207;VDB=0.3365;EFF=INTERGENIC(MODIFIER||||||||||1) FN3667-S.SNP.11:10474882 chr11:010474882 0 W/10474882-10474882 FN3667-S SNP C -> A AC=1;AN=190;BQB=0.822468;DP=2741;DP4=1293,1362,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.61757e-09;MQSB=0.896655;RPB=0.668591;SGB=39.6545;VDB=0.703613;EFF=UTR_5_PRIME(MODIFIER||71||484|LOC_Os11g18570|protein_coding|CODING|LOC_Os11g18570.1|1|1) FN1032-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN1032-S Single Base Substitution C-G INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1318-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN1318-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1762-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN1762-S SNP C -> G AC=2;AN=188;BQB=0.129334;DP=2259;DP4=951,1269,10,10;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00619743;MQB=1.07239e-05;MQSB=0.137203;RPB=0.687237;SGB=11.7114;VDB=0.829464;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN3464-S SNP C -> G AC=2;AN=184;BQB=0.96507;DP=3146;DP4=1278,1721,9,21;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00222505;MQB=8.05159e-11;MQSB=7.63685e-05;RPB=0.491912;SGB=130.135;VDB=0.553301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN3845-S SNP C -> G AC=1;AN=190;BQB=0.987181;DP=2580;DP4=903,1552,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00193798;MQB=0.000356191;MQSB=0.0111791;RPB=0.311037;SGB=44.5415;VDB=0.190776;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN3902-S SNP C -> G AC=1;AN=158;BQB=0.996443;DP=2317;DP4=833,1353,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.000431593;MQB=9.32118e-06;MQSB=0.00471098;RPB=0.93276;SGB=37.4429;VDB=0.515892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3958-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN3958-S SNP C -> G AC=1;AN=168;BQB=0.999765;DP=2230;DP4=717,1398,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00224215;MQB=4.27336e-05;MQSB=0.00452309;RPB=0.958215;SGB=61.0344;VDB=0.545637;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN457-S Single Base Substitution C-G INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN494-S.SNP.11:10483476 chr11:010483476 0 W/10483476-10483476 FN494-S Single Base Substitution C-G INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN3848-S.SNP.11:10484953 chr11:010484953 0 W/10484953-10484953 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.998509;DP=2105;DP4=1074,915,9,3;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0489311;MQB=0.872208;MQSB=0.417638;RPB=0.980502;SGB=47.0672;VDB=0.235908;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.11:10486420 chr11:010486420 0 W/10486420-10486420 FN742-S Single Base Substitution G-A INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2608-S.SNP.11:10490921 chr11:010490921 0 W/10490921-10490921 FN2608-S SNP G -> A AC=1;AN=198;BQB=0.78892;DP=4635;DP4=2208,2150,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000431499;MQB=8.20955e-07;MQSB=0.93736;RPB=0.195503;SGB=54.144;VDB=0.492586;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R1122K|1184|LOC_Os11g18580|protein_coding|CODING|LOC_Os11g18580.1|3|1) FN3723-S.SNP.11:10491332 chr11:010491332 0 W/10491332-10491332 FN3723-S SNP A -> T AC=2;AN=190;BQB=0.900032;DP=3193;DP4=1576,1523,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000313185;MQB=1.09002e-10;MQSB=0.674504;RPB=0.798966;SGB=80.9724;VDB=0.255357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3566-S.SNP.11:10492052 chr11:010492052 0 W/10492052-10492052 FN3566-S SNP C -> T AC=1;AN=188;BQB=0.982448;DP=3274;DP4=1297,1904,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00213806;MQB=0.000102177;MQSB=0.157558;RPB=0.419035;SGB=35.3493;VDB=0.579238;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.11:10499267 chr11:010499267 0 W/10499267-10499267 FN-212 Single Base Substitution A-G INTERGENIC HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN1073-S.SNP.11:10501958 chr11:010501958 0 W/10501958-10501958 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3508-S.SNP.11:10507117 chr11:010507117 0 W/10507117-10507117 FN3508-S SNP A -> G AC=2;AN=188;BQB=0.986905;DP=3113;DP4=1170,1736,21,19;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.0147767;MQB=0.999982;MQSB=0.191437;RPB=0.791423;SGB=-1.96068;VDB=0.438481;EFF=INTERGENIC(MODIFIER||||||||||1) FN3877-S.SNP.11:10507392 chr11:010507392 0 W/10507392-10507392 FN3877-S SNP A -> G AC=1;AN=158;BQB=0.888241;DP=2572;DP4=1193,1288,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00583204;MQB=4.84629e-08;MQSB=0.362246;RPB=0.526884;SGB=73.2838;VDB=0.645807;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.11:10511089 chr11:010511089 0 W/10511089-10511089 FN3862-S SNP C -> T AC=2;AN=158;BQB=0.46076;DP=2393;DP4=1026,1269,13,10;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.00668617;MQB=0.000107771;MQSB=0.000459283;RPB=0.319912;SGB=40.4048;VDB=0.766232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.11:10511627 chr11:010511627 0 W/10511627-10511627 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1281-S.SNP.11:10511796 chr11:010511796 0 W/10511796-10511796 FN1281-S Single Base Substitution T-G INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN519-S.SNP.11:10512492 chr11:010512492 0 W/10512492-10512492 FN519-S Single Base Substitution G-T INTERGENIC HOMO SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN488-S.SNP.11:10512913 chr11:010512913 0 W/10512913-10512913 FN488-S Single Base Substitution G-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2658-S.SNP.11:10522657 chr11:010522657 0 W/10522657-10522657 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.29567;DP=4728;DP4=2271,2190,20,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.20138e-13;MQSB=7.34196e-05;RPB=0.835811;SGB=146.368;VDB=0.714068;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R405H|677|LOC_Os11g18640|protein_coding|CODING|LOC_Os11g18640.1|5|1) FN2398.SNP.11:10525306 chr11:010525306 0 W/10525306-10525306 FN2398 SNP C -> A AC=2;AN=200;BQB=0.21653;DP=4652;DP4=2335,2059,24,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.46098e-20;MQSB=0.867069;RPB=0.930672;SGB=183.209;VDB=0.093669;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.11:10526323 chr11:010526323 0 W/10526323-10526323 FN369-S Single Base Substitution G-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN2547-S.SNP.11:10528863 chr11:010528863 0 W/10528863-10528863 FN2547-S SNP A -> G AC=1;AN=198;BQB=0.930757;DP=3578;DP4=1925,1382,5,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.00197744;MQSB=0.147927;RPB=0.766323;SGB=26.5745;VDB=0.531056;EFF=INTERGENIC(MODIFIER||||||||||1) FN3806-S.SNP.11:10531937 chr11:010531937 0 W/10531937-10531937 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.979228;DP=2698;DP4=1196,1408,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99289e-06;MQSB=0.998261;RPB=0.965722;SGB=28.9929;VDB=0.252521;EFF=INTERGENIC(MODIFIER||||||||||1) FN679-S.SNP.11:10541414 chr11:010541414 0 W/10541414-10541414 FN679-S Single Base Substitution G-C INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN-79.SNP.11:10541977 chr11:010541977 0 W/10541977-10541977 FN-79 Single Base Substitution T-C INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN1031-S.SNP.11:10562486 chr11:010562486 0 W/10562486-10562486 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2223-S.SNP.11:10564802 chr11:010564802 0 W/10564802-10564802 FN2223-S SNP T -> G AC=1;AN=190;BQB=0.902962;DP=3808;DP4=1231,2161,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31839e-07;MQSB=0.997673;RPB=0.913395;SGB=-14.3297;VDB=0.893051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2426.SNP.11:10567201 chr11:010567201 0 W/10567201-10567201 FN2426 SNP C -> A AC=2;AN=200;BQB=0.379197;DP=4263;DP4=1828,2178,27,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000469153;MQB=1.9716e-25;MQSB=0.910636;RPB=0.968382;SGB=173.661;VDB=0.137974;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.11:10569043 chr11:010569043 0 W/10569043-10569043 FN3926-S SNP A -> T AC=1;AN=158;BQB=0.989755;DP=2072;DP4=962,1031,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.56491e-11;MQSB=0.981895;RPB=0.540429;SGB=90.7616;VDB=0.416905;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.11:10569271 chr11:010569271 0 W/10569271-10569271 FN1336-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN3763-S.SNP.11:10572469 chr11:010572469 0 W/10572469-10572469 FN3763-S SNP C -> T AC=2;AN=190;BQB=0.902594;DP=2836;DP4=1343,1354,10,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.30196e-13;MQSB=0.961515;RPB=0.906381;SGB=117.403;VDB=0.994329;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R47*|70|LOC_Os11g18680|protein_coding|CODING|LOC_Os11g18680.1|2|1) FN1565-S.SNP.11:10581486 chr11:010581486 0 W/10581486-10581486 FN1565-S Single Base Substitution G-T INTRON HET SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2436.SNP.11:10582339 chr11:010582339 0 W/10582339-10582339 FN2436 SNP C -> G AC=1;AN=200;BQB=0.921819;DP=4076;DP4=1786,1951,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.24238e-06;MQSB=0.845367;RPB=0.997713;SGB=45.0543;VDB=0.991348;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A188|793|LOC_Os11g18690|protein_coding|CODING|LOC_Os11g18690.1|2|1) FN2085-S.SNP.11:10592020 chr11:010592020 0 W/10592020-10592020 FN2085-S SNP C -> A AC=1;AN=168;BQB=0.937638;DP=4429;DP4=2002,2390,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000225785;MQB=1.61487e-13;MQSB=0.864541;RPB=0.999895;SGB=14.2064;VDB=0.81655;EFF=INTRON(MODIFIER||||560|LOC_Os11g18700|protein_coding|CODING|LOC_Os11g18700.1|2|1) FN-77.SNP.11:10592802 chr11:010592802 0 W/10592802-10592802 FN-77 Single Base Substitution A-C INTRON HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN1119-S.SNP.11:10598668 chr11:010598668 0 W/10598668-10598668 FN1119-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g18710 expressed protein SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2794-S.SNP.11:10598953 chr11:010598953 0 W/10598953-10598953 FN2794-S SNP C -> G AC=1;AN=198;BQB=0.90182;DP=3814;DP4=2017,1580,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.55672e-15;MQSB=0.937526;RPB=0.574446;SGB=-5.5041;VDB=0.569479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I126M|647|LOC_Os11g18710|protein_coding|CODING|LOC_Os11g18710.1|1|1) FN2685-S.SNP.11:10600679 chr11:010600679 0 W/10600679-10600679 FN2685-S SNP T -> C AC=2;AN=200;BQB=0.812891;DP=4516;DP4=2083,2165,19,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32505e-20;MQSB=0.787388;RPB=0.914674;SGB=155.578;VDB=0.566031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2233-S.SNP.11:10604359 chr11:010604359 0 W/10604359-10604359 FN2233-S SNP A -> G AC=1;AN=190;BQB=0.211547;DP=4851;DP4=2342,2142,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.60532e-11;MQSB=0.882365;RPB=0.830532;SGB=85.5263;VDB=0.352708;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Gtg|M643V|796|LOC_Os11g18720|protein_coding|CODING|LOC_Os11g18720.1|5|1) FN4160-S.SNP.11:10609801 chr11:010609801 0 W/10609801-10609801 FN4160-S SNP T -> A AC=1;AN=170;BQB=0.959559;DP=2585;DP4=1266,1234,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.27868e-09;MQSB=0.793528;RPB=0.844381;SGB=32.0972;VDB=0.828957;EFF=UTR_3_PRIME(MODIFIER||257||771|LOC_Os11g18730|protein_coding|CODING|LOC_Os11g18730.1|5|1) FN865-S.SNP.11:10614996 chr11:010614996 0 W/10614996-10614996 FN865-S Single Base Substitution G-T INTRON HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN865-S.SNP.11:10615010 chr11:010615010 0 W/10615010-10615010 FN865-S Single Base Substitution T-G INTRON HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN865-S.SNP.11:10615034 chr11:010615034 0 W/10615034-10615034 FN865-S Single Base Substitution G-A INTRON HOMO SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2458.SNP.11:10616631 chr11:010616631 0 W/10616631-10616631 FN2458 SNP A -> T AC=1;AN=200;BQB=0.916097;DP=4706;DP4=2218,2296,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000295306;MQSB=5.66081e-06;RPB=0.994814;SGB=33.0593;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.11:10616650 chr11:010616650 0 W/10616650-10616650 FN4113-S SNP A -> G AC=1;AN=182;BQB=0.477249;DP=2713;DP4=1143,1440,5,20;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=2.56462e-09;MQSB=0.172672;RPB=0.795225;SGB=77.758;VDB=0.379177;EFF=INTERGENIC(MODIFIER||||||||||1) FN2358.SNP.11:10617712 chr11:010617712 0 W/10617712-10617712 FN2358 SNP A -> G AC=1;AN=192;BQB=0.744098;DP=4559;DP4=1992,2287,10,2;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000219346;MQB=2.97553e-05;MQSB=0.235692;RPB=0.169483;SGB=16.0922;VDB=0.0254437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.11:10623326 chr11:010623326 0 W/10623326-10623326 FN3890-S SNP A -> C AC=1;AN=158;BQB=0.636365;DP=2470;DP4=1116,1253,9,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.41352e-10;MQSB=0.704169;RPB=0.811375;SGB=90.7616;VDB=0.988177;EFF=INTERGENIC(MODIFIER||||||||||1) FN-68.SNP.11:10629607 chr11:010629607 0 W/10629607-10629607 FN-68 Single Base Substitution G-A INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN-68.SNP.11:10629608 chr11:010629608 0 W/10629608-10629608 FN-68 Single Base Substitution T-A INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN_N1-130-1.SNP.11:10644684 chr11:010644684 0 W/10644684-10644684 FN_N1-130-1 Single Base Substitution G-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN511-S.SNP.11:10644756 chr11:010644756 0 W/10644756-10644756 FN511-S Single Base Substitution T-G INTERGENIC HOMO SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1093-S.SNP.11:10664398 chr11:010664398 0 W/10664398-10664398 FN1093-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN-386.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN-386 Single Base Substitution G-A STOP_GAINED HET LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 372, Mutant_ID: FN-386, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN1043-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1043-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN1070-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1070-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 957, Mutant_ID: FN1070-S, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1230-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1230-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1275-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1275-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN1385-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1385-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1550-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1550-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1688-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN1688-S SNP G -> A AC=2;AN=188;BQB=0.0630705;DP=2081;DP4=873,1142,7,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.99555e-06;MQSB=0.955274;RPB=0.833376;SGB=-79.0704;VDB=0.903388;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q223*|1058|LOC_Os11g18790|protein_coding|CODING|LOC_Os11g18790.1|3|1);LOF=(LOC_Os11g18790|LOC_Os11g18790|1|1.00);NMD=(LOC_Os11g18790|LOC_Os11g18790|1|1.00) FN3110-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN3110-S SNP G -> A AC=2;AN=184;BQB=0.985495;DP=3121;DP4=1402,1601,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.16015e-18;MQSB=0.937308;RPB=0.241753;SGB=92.0965;VDB=0.696811;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q223*|1058|LOC_Os11g18790|protein_coding|CODING|LOC_Os11g18790.1|3|1);LOF=(LOC_Os11g18790|LOC_Os11g18790|1|1.00);NMD=(LOC_Os11g18790|LOC_Os11g18790|1|1.00) FN3722-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN3722-S SNP G -> A AC=2;AN=190;BQB=0.988852;DP=2811;DP4=1179,1471,14,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.49914e-19;MQSB=0.996068;RPB=0.990235;SGB=103.624;VDB=0.827962;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q223*|1058|LOC_Os11g18790|protein_coding|CODING|LOC_Os11g18790.1|3|1);LOF=(LOC_Os11g18790|LOC_Os11g18790|1|1.00);NMD=(LOC_Os11g18790|LOC_Os11g18790|1|1.00) FN3790-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN3790-S SNP G -> A AC=2;AN=190;BQB=0.44076;DP=3007;DP4=1341,1522,22,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.52919e-16;MQSB=0.968654;RPB=0.627682;SGB=114.286;VDB=0.474907;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q223*|1058|LOC_Os11g18790|protein_coding|CODING|LOC_Os11g18790.1|3|1);LOF=(LOC_Os11g18790|LOC_Os11g18790|1|1.00);NMD=(LOC_Os11g18790|LOC_Os11g18790|1|1.00) FN3926-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN3926-S SNP G -> A AC=1;AN=158;BQB=0.867663;DP=2444;DP4=1009,1310,19,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.79655e-18;MQSB=0.955114;RPB=0.896969;SGB=143.195;VDB=0.562262;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q223*|1058|LOC_Os11g18790|protein_coding|CODING|LOC_Os11g18790.1|3|1);LOF=(LOC_Os11g18790|LOC_Os11g18790|1|1.00);NMD=(LOC_Os11g18790|LOC_Os11g18790|1|1.00) FN552-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN552-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN726-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN726-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN907-S.SNP.11:10667584 chr11:010667584 0 W/10667584-10667584 FN907-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3947-S.SNP.11:10671606 chr11:010671606 0 W/10671606-10671606 FN3947-S SNP A -> T AC=1;AN=168;BQB=0.562693;DP=2995;DP4=1456,1383,15,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.70291e-12;MQSB=0.98068;RPB=0.349978;SGB=75.9177;VDB=0.477805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.11:10678648 chr11:010678648 0 W/10678648-10678648 FN1642-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os11g18810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2331.SNP.11:10680008 chr11:010680008 0 W/10680008-10680008 FN2331 SNP A -> G AC=2;AN=192;BQB=0.0952053;DP=4830;DP4=2032,2432,17,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=6.61415e-25;MQSB=0.997355;RPB=0.0940266;SGB=55.8496;VDB=0.160486;EFF=SPLICE_SITE_REGION(LOW||||650|LOC_Os11g18820|protein_coding|CODING|LOC_Os11g18820.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P431|650|LOC_Os11g18820|protein_coding|CODING|LOC_Os11g18820.1|4|1) FN1075-S.SNP.11:10682245 chr11:010682245 0 W/10682245-10682245 FN1075-S Single Base Substitution A-T INTRON HET SNo: 962, Mutant_ID: FN1075-S, Generation: M2, Mutations: 84, Genes: 49, Seed availability: Yes. FN-259.SNP.11:10691514 chr11:010691514 0 W/10691514-10691514 FN-259 Single Base Substitution G-T INTERGENIC HOMO SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN1118-S.SNP.11:10691514 chr11:010691514 0 W/10691514-10691514 FN1118-S Single Base Substitution G-T INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1124-S.SNP.11:10691514 chr11:010691514 0 W/10691514-10691514 FN1124-S Single Base Substitution G-T INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN2494.SNP.11:10691514 chr11:010691514 0 W/10691514-10691514 FN2494 SNP G -> T AC=1;AN=200;BQB=0.96264;DP=4598;DP4=2134,2186,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32429e-13;MQSB=0.943502;RPB=0.72483;SGB=72.7161;VDB=0.593402;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.11:10700303 chr11:010700303 0 W/10700303-10700303 FN533-S Single Base Substitution A-G INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN1521-S.SNP.11:10704964 chr11:010704964 0 W/10704964-10704964 FN1521-S Single Base Substitution C-A INTERGENIC HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2483.SNP.11:10711923 chr11:010711923 0 W/10711923-10711923 FN2483 SNP C -> T AC=1;AN=200;BQB=0.481386;DP=4905;DP4=2498,2193,11,15;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.103976;MQB=0.0056002;MQSB=0.0230671;RPB=0.753498;SGB=52.9314;VDB=0.823676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.11:10713474 chr11:010713474 0 W/10713474-10713474 FN3311-S SNP T -> G AC=2;AN=184;BQB=0.844023;DP=2859;DP4=1305,1444,19,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.72171e-23;MQSB=0.993084;RPB=0.138632;SGB=161.787;VDB=0.734097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.11:10715677 chr11:010715677 0 W/10715677-10715677 FN3713-S SNP A -> G AC=1;AN=190;BQB=0.318583;DP=2393;DP4=1280,1019,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.94284e-10;MQSB=0.98817;RPB=0.776957;SGB=13.4344;VDB=0.929294;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.11:10719913 chr11:010719913 0 W/10719913-10719913 FN1724-S SNP G -> C AC=2;AN=188;BQB=0.589221;DP=2784;DP4=1232,1504,12,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.000269333;MQSB=0.947867;RPB=0.888488;SGB=16.3413;VDB=0.129441;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.11:10722326 chr11:010722326 0 W/10722326-10722326 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.201692;DP=4086;DP4=1977,1893,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21498e-13;MQSB=0.991975;RPB=0.932393;SGB=65.3149;VDB=0.163547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.11:10723497 chr11:010723497 0 W/10723497-10723497 FN2139-S SNP C -> A AC=1;AN=168;BQB=0.765411;DP=3729;DP4=1905,1770,14,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.51286e-12;MQSB=0.999378;RPB=0.783841;SGB=-10.6335;VDB=0.530352;EFF=INTERGENIC(MODIFIER||||||||||1) FN3444-S.SNP.11:10728139 chr11:010728139 0 W/10728139-10728139 FN3444-S SNP C -> T AC=1;AN=184;BQB=0.883641;DP=2655;DP4=1162,1399,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.89169e-08;MQSB=0.989736;RPB=0.980056;SGB=49.835;VDB=0.800009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.11:10731059 chr11:010731059 0 W/10731059-10731059 FN3698-S SNP T -> C AC=1;AN=190;BQB=0.987171;DP=3104;DP4=1630,1398,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.28631e-07;MQSB=0.936214;RPB=0.671367;SGB=39.9877;VDB=0.859382;EFF=INTERGENIC(MODIFIER||||||||||1) FN925-S.SNP.11:10746558 chr11:010746558 0 W/10746558-10746558 FN925-S Single Base Substitution C-T INTRON HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3418-S.SNP.11:10747918 chr11:010747918 0 W/10747918-10747918 FN3418-S SNP A -> G AC=1;AN=184;BQB=0.532614;DP=3031;DP4=1260,1307,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.59639e-08;MQSB=0.746491;RPB=0.900183;SGB=-86.6977;VDB=0.946479;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T31A|152|LOC_Os11g18890|protein_coding|CODING|LOC_Os11g18890.1|1|1) FN3535-S.SNP.11:10751805 chr11:010751805 0 W/10751805-10751805 FN3535-S SNP T -> C AC=2;AN=188;BQB=0.969019;DP=2948;DP4=1447,1419,7,10;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.61157e-06;MQSB=0.99987;RPB=0.970667;SGB=71.6954;VDB=0.135128;EFF=INTRON(MODIFIER||||270|LOC_Os11g18900|protein_coding|CODING|LOC_Os11g18900.1|1|1) FN2630-S.SNP.11:10763969 chr11:010763969 0 W/10763969-10763969 FN2630-S SNP C -> T AC=2;AN=200;BQB=0.758326;DP=4425;DP4=2181,1858,25,18;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00519774;MQB=2.28039e-17;MQSB=0.060345;RPB=0.996535;SGB=97.2193;VDB=0.382608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.11:10767415 chr11:010767415 0 W/10767415-10767415 FN3442-S SNP G -> T AC=2;AN=184;BQB=0.945467;DP=2449;DP4=1378,980,9,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47697e-11;MQSB=0.915814;RPB=0.368769;SGB=60.4004;VDB=0.860534;EFF=INTERGENIC(MODIFIER||||||||||1) FN-208.SNP.11:10767908 chr11:010767908 0 W/10767908-10767908 FN-208 Single Base Substitution G-A INTERGENIC HOMO SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-375.SNP.11:10767908 chr11:010767908 0 W/10767908-10767908 FN-375 Single Base Substitution G-A INTERGENIC HOMO SNo: 364, Mutant_ID: FN-375, Generation: M2, Mutations: 62, Genes: 157, Seed availability: Yes. FN-411.SNP.11:10767908 chr11:010767908 0 W/10767908-10767908 FN-411 Single Base Substitution G-A INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN-89.SNP.11:10767908 chr11:010767908 0 W/10767908-10767908 FN-89 Single Base Substitution G-A INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN411-S.SNP.11:10767908 chr11:010767908 0 W/10767908-10767908 FN411-S Single Base Substitution G-A INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN2719-S.SNP.11:10770342 chr11:010770342 0 W/10770342-10770342 FN2719-S SNP T -> C AC=1;AN=200;BQB=0.855493;DP=4665;DP4=2393,2080,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.93531e-09;MQSB=0.624325;RPB=0.802129;SGB=29.4849;VDB=0.716612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.11:10771596 chr11:010771596 0 W/10771596-10771596 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.99994;DP=4523;DP4=2221,2066,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47704e-10;MQSB=0.93553;RPB=0.0879991;SGB=68.0801;VDB=0.604495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.11:10780106 chr11:010780106 0 W/10780106-10780106 FN2335 SNP A -> T AC=1;AN=192;BQB=0.892998;DP=5154;DP4=2340,2486,13,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.76845e-17;MQSB=0.223008;RPB=0.980349;SGB=135.933;VDB=0.462687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.11:10783010 chr11:010783010 0 W/10783010-10783010 FN3913-S SNP T -> G AC=1;AN=158;BQB=0.877423;DP=3041;DP4=1040,1773,10,25;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.96478e-20;MQSB=0.781742;RPB=0.999788;SGB=-9.888;VDB=0.183773;EFF=INTERGENIC(MODIFIER||||||||||1) FN988-S.SNP.11:10788372 chr11:010788372 0 W/10788372-10788372 FN988-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN-81.SNP.11:10793859 chr11:010793859 0 W/10793859-10793859 FN-81 Single Base Substitution G-A INTERGENIC HOMO SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN747-S.SNP.11:10796924 chr11:010796924 0 W/10796924-10796924 FN747-S Single Base Substitution A-T INTERGENIC HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN-52.SNP.11:10798417 chr11:010798417 0 W/10798417-10798417 FN-52 Single Base Substitution T-C INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN885-S.SNP.11:10798655 chr11:010798655 0 W/10798655-10798655 FN885-S Single Base Substitution A-T INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN480-S.SNP.11:10813695 chr11:010813695 0 W/10813695-10813695 FN480-S Single Base Substitution G-A INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3948-S.SNP.11:10819701 chr11:010819701 0 W/10819701-10819701 FN3948-S SNP C -> T AC=2;AN=168;BQB=0.454349;DP=3185;DP4=1258,1652,20,31;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00376766;MQB=1.11437e-17;MQSB=1.24169e-05;RPB=0.360865;SGB=54.2693;VDB=0.72504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-339.SNP.11:10820182 chr11:010820182 0 W/10820182-10820182 FN-339 Single Base Substitution C-G INTERGENIC HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN1030-S.SNP.11:10822911 chr11:010822911 0 W/10822911-10822911 FN1030-S Single Base Substitution A-T INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN3764-S.SNP.11:10836572 chr11:010836572 0 W/10836572-10836572 FN3764-S SNP T -> C AC=1;AN=190;BQB=0.802528;DP=2525;DP4=1201,1260,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27929e-08;MQSB=0.932708;RPB=0.813612;SGB=43.2083;VDB=0.767569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.11:10844075 chr11:010844075 0 W/10844075-10844075 FN1561-S Single Base Substitution C-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-277.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN-277 Single Base Substitution C-T INTRON HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-308.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN-308 Single Base Substitution C-T INTRON HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN1458-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN1458-S Single Base Substitution C-T INTRON HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1488-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN1488-S Single Base Substitution C-T INTRON Homo SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN1585-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN1585-S Single Base Substitution C-T INTRON Homo SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN3548-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN3548-S SNP C -> T AC=1;AN=188;BQB=0.775484;DP=2751;DP4=1046,1531,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35005e-09;MQSB=0.000658152;RPB=0.916361;SGB=-13.9132;VDB=0.369619;EFF=INTRON(MODIFIER||||1243|LOC_Os11g19030|protein_coding|CODING|LOC_Os11g19030.1|1|1) FN4116-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN4116-S SNP C -> T AC=2;AN=182;BQB=0.481487;DP=2887;DP4=1125,1547,16,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.87693e-09;MQSB=0.0221539;RPB=0.68472;SGB=43.231;VDB=0.254826;EFF=INTRON(MODIFIER||||1243|LOC_Os11g19030|protein_coding|CODING|LOC_Os11g19030.1|1|1) FN414-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN414-S Single Base Substitution C-T INTRON HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN943-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN943-S Single Base Substitution C-T INTRON HOMO SNo: 849, Mutant_ID: FN943-S, Generation: M2, Mutations: 64, Genes: 79, Seed availability: Yes. FN989-S.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 FN989-S Single Base Substitution C-T INTRON HOMO SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. W674-4-1.SNP.11:10845900 chr11:010845900 0 W/10845900-10845900 W674-4-1 Single Base Substitution C-T INTRON HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2418.SNP.11:10848993 chr11:010848993 0 W/10848993-10848993 FN2418 SNP C -> T AC=1;AN=200;BQB=0.690241;DP=4862;DP4=2216,2332,14,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000411353;MQB=2.62586e-17;MQSB=0.773773;RPB=0.308292;SGB=25.5416;VDB=0.713333;EFF=INTRON(MODIFIER||||1243|LOC_Os11g19030|protein_coding|CODING|LOC_Os11g19030.1|4|1) FN2335.SNP.11:10854993 chr11:010854993 0 W/10854993-10854993 FN2335 SNP A -> G AC=1;AN=192;BQB=0.292232;DP=4577;DP4=2007,2194,12,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.29295e-16;MQSB=0.98771;RPB=0.588355;SGB=64.8148;VDB=0.17793;EFF=INTRON(MODIFIER||||1243|LOC_Os11g19030|protein_coding|CODING|LOC_Os11g19030.1|11|1) FN1471-S.SNP.11:10858748 chr11:010858748 0 W/10858748-10858748 FN1471-S SNP G -> A AC=2;AN=188;BQB=0.539584;DP=3598;DP4=1760,1774,21,27;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0;MQB=1.01819e-09;MQSB=0.969657;RPB=0.981027;SGB=-102.69;VDB=0.459261;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.11:10859163 chr11:010859163 0 W/10859163-10859163 FN2399 SNP C -> A AC=1;AN=200;BQB=0.322253;DP=4834;DP4=2143,2347,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.50084e-08;MQSB=0.904139;RPB=0.192802;SGB=-106.906;VDB=0.0342123;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.11:10862195 chr11:010862195 0 W/10862195-10862195 FN3757-S SNP A -> T AC=1;AN=190;BQB=0.498253;DP=2811;DP4=1391,1309,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.87987e-10;MQSB=0.917679;RPB=0.700133;SGB=76.4186;VDB=0.632406;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.11:10862593 chr11:010862593 0 W/10862593-10862593 FN2398 SNP A -> C AC=1;AN=200;BQB=0.892142;DP=5019;DP4=2362,2349,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199243;MQB=5.8087e-13;MQSB=0.957604;RPB=0.749508;SGB=83.5316;VDB=0.970786;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.11:10865581 chr11:010865581 0 W/10865581-10865581 FN3987-S SNP C -> T AC=1;AN=168;BQB=0.215372;DP=2618;DP4=1134,1361,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.64815e-09;MQSB=0.964222;RPB=0.546024;SGB=8.48315;VDB=0.516975;EFF=INTRON(MODIFIER||||559|LOC_Os11g19060|protein_coding|CODING|LOC_Os11g19060.1|2|1) FN1467-S.SNP.11:10865951 chr11:010865951 0 W/10865951-10865951 FN1467-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g19060 BABY BOOM 1, putative, expressed SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN3489-S.SNP.11:10866328 chr11:010866328 0 W/10866328-10866328 FN3489-S SNP C -> T AC=1;AN=184;BQB=0.528371;DP=2474;DP4=1043,1335,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.02678e-05;MQSB=0.999546;RPB=0.282051;SGB=53.2642;VDB=0.656653;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P234L|559|LOC_Os11g19060|protein_coding|CODING|LOC_Os11g19060.1|4|1),SPLICE_SITE_REGION(LOW||||559|LOC_Os11g19060|protein_coding|CODING|LOC_Os11g19060.1|4|1) FN2082-S.SNP.11:10878140 chr11:010878140 0 W/10878140-10878140 FN2082-S SNP T -> A AC=1;AN=168;BQB=0.186329;DP=4043;DP4=2105,1906,15,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27096e-07;MQSB=0.990678;RPB=0.872276;SGB=-90.3546;VDB=0.570464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.11:10878142 chr11:010878142 0 W/10878142-10878142 FN2082-S SNP T -> A AC=1;AN=168;BQB=0.10309;DP=4013;DP4=2083,1901,18,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.68843e-07;MQSB=0.98766;RPB=0.762597;SGB=-92.9238;VDB=0.563736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.11:10878746 chr11:010878746 0 W/10878746-10878746 FN2614-S SNP A -> G AC=2;AN=198;BQB=0.803968;DP=4222;DP4=1950,2002,17,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.07607e-17;MQSB=0.384949;RPB=0.954577;SGB=104.861;VDB=0.603537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1310-S.SNP.11:10879266 chr11:010879266 0 W/10879266-10879266 FN1310-S Single Base Substitution G-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2467.SNP.11:10882350 chr11:010882350 0 W/10882350-10882350 FN2467 SNP G -> A AC=2;AN=200;BQB=0.907021;DP=5015;DP4=2360,2371,31,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34302e-26;MQSB=0.884116;RPB=0.998309;SGB=173.661;VDB=0.142817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.11:10882639 chr11:010882639 0 W/10882639-10882639 FN2146-S SNP T -> C AC=1;AN=168;BQB=0.66945;DP=3681;DP4=1672,1971,9,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.42087e-05;MQSB=0.879798;RPB=0.830397;SGB=14.8923;VDB=0.189099;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.11:10883642 chr11:010883642 0 W/10883642-10883642 W246-5-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3627-S.SNP.11:10883820 chr11:010883820 0 W/10883820-10883820 FN3627-S SNP A -> G AC=1;AN=190;BQB=0.833696;DP=2735;DP4=1644,876,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.39344e-07;MQSB=0.010073;RPB=0.104306;SGB=-13.7759;VDB=0.282224;EFF=INTERGENIC(MODIFIER||||||||||1) FN4167-S.SNP.11:10889720 chr11:010889720 0 W/10889720-10889720 FN4167-S SNP C -> T AC=1;AN=170;BQB=0.576339;DP=2511;DP4=1231,1229,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000205449;MQSB=0.952511;RPB=0.983372;SGB=30.1021;VDB=0.791433;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q392*|412|LOC_Os11g19100|protein_coding|CODING|LOC_Os11g19100.3|1|1),STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q392*|412|LOC_Os11g19100|protein_coding|CODING|LOC_Os11g19100.2|2|1) FN3292-S.SNP.11:10891332 chr11:010891332 0 W/10891332-10891332 FN3292-S SNP T -> A AC=2;AN=184;BQB=0.943499;DP=2690;DP4=1229,1305,18,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.30783e-13;MQSB=0.993031;RPB=0.999601;SGB=22.0202;VDB=0.619677;EFF=INTRON(MODIFIER||||412|LOC_Os11g19100|protein_coding|CODING|LOC_Os11g19100.3|3|1) FN989-S.SNP.11:10905832 chr11:010905832 0 W/10905832-10905832 FN989-S Single Base Substitution G-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN772-S.SNP.11:10906488 chr11:010906488 0 W/10906488-10906488 FN772-S Single Base Substitution T-C INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-233.SNP.11:10912485 chr11:010912485 0 W/10912485-10912485 FN-233 Single Base Substitution C-T INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN411-S.SNP.11:10913009 chr11:010913009 0 W/10913009-10913009 FN411-S Single Base Substitution T-G INTRON HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1053-S.SNP.11:10917099 chr11:010917099 0 W/10917099-10917099 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1056-S.SNP.11:10919192 chr11:010919192 0 W/10919192-10919192 FN1056-S Single Base Substitution C-A INTRON HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN-305.SNP.11:10919775 chr11:010919775 0 W/10919775-10919775 FN-305 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g19140 methyltransferase domain containing protein, expressed SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-305.SNP.11:10919776 chr11:010919776 0 W/10919776-10919776 FN-305 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g19140 methyltransferase domain containing protein, expressed SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3829-S.SNP.11:10921694 chr11:010921694 0 W/10921694-10921694 FN3829-S SNP A -> C AC=2;AN=190;BQB=0.968903;DP=2000;DP4=688,1218,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.44709e-10;MQSB=0.250721;RPB=0.366909;SGB=33.8752;VDB=0.903782;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gGc|V81G|371|LOC_Os11g19140|protein_coding|CODING|LOC_Os11g19140.1|2|1),SPLICE_SITE_REGION(LOW||||371|LOC_Os11g19140|protein_coding|CODING|LOC_Os11g19140.1|2|1) FN2182-S.SNP.11:10921731 chr11:010921731 0 W/10921731-10921731 FN2182-S SNP G -> A AC=1;AN=190;BQB=0.883812;DP=4307;DP4=1636,2369,5,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.89533e-10;MQSB=0.606117;RPB=0.997442;SGB=85.5263;VDB=0.871941;EFF=INTRON(MODIFIER||||371|LOC_Os11g19140|protein_coding|CODING|LOC_Os11g19140.1|1|1) FN2696-S.SNP.11:10923621 chr11:010923621 0 W/10923621-10923621 FN2696-S SNP C -> G AC=1;AN=200;BQB=0.990023;DP=4776;DP4=2557,1997,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.29351e-09;MQSB=0.860575;RPB=0.915297;SGB=77.2904;VDB=0.461507;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.11:10930630 chr11:010930630 0 W/10930630-10930630 FN2108-S SNP A -> G AC=2;AN=168;BQB=0.283322;DP=3389;DP4=1742,1592,16,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.01848e-08;MQSB=0.988708;RPB=0.989796;SGB=-10.2027;VDB=0.741759;EFF=INTERGENIC(MODIFIER||||||||||1) FN1068-S.SNP.11:10958718 chr11:010958718 0 W/10958718-10958718 FN1068-S Single Base Substitution C-A INTERGENIC HET SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN-76.SNP.11:10971927 chr11:010971927 0 W/10971927-10971927 FN-76 Single Base Substitution G-A INTERGENIC HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN389-S.SNP.11:10974020 chr11:010974020 0 W/10974020-10974020 FN389-S Single Base Substitution A-G INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1116-S.SNP.11:10974473 chr11:010974473 0 W/10974473-10974473 FN1116-S Single Base Substitution A-G INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN975-S.SNP.11:10982717 chr11:010982717 0 W/10982717-10982717 FN975-S Single Base Substitution C-T INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN4221-S.SNP.11:10991446 chr11:010991446 0 W/10991446-10991446 FN4221-S SNP C -> A AC=1;AN=170;BQB=0.995506;DP=2984;DP4=1634,1250,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.58096e-09;MQSB=0.730601;RPB=0.421056;SGB=65.6427;VDB=0.322835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.11:10994116 chr11:010994116 0 W/10994116-10994116 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.778141;DP=4259;DP4=2112,1970,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00704391;MQB=0.00287089;MQSB=0.00487314;RPB=0.907043;SGB=35.7638;VDB=0.420379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A482T|1234|LOC_Os11g19230|protein_coding|CODING|LOC_Os11g19230.1|3|1) FN821-S.SNP.11:10998399 chr11:010998399 0 W/10998399-10998399 FN821-S Single Base Substitution T-A INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN3411-S.SNP.11:11001511 chr11:011001511 0 W/11001511-11001511 FN3411-S SNP T -> A AC=1;AN=184;BQB=0.9514;DP=2775;DP4=1223,1461,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.70919e-07;MQSB=0.97989;RPB=0.916853;SGB=39.699;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.11:11007314 chr11:011007314 0 W/11007314-11007314 FN-247 Single Base Substitution G-A INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN948-S.SNP.11:11011495 chr11:011011495 0 W/11011495-11011495 FN948-S Single Base Substitution T-A INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN4032-S.SNP.11:11025055 chr11:011025055 0 W/11025055-11025055 FN4032-S SNP T -> A AC=2;AN=168;BQB=0.510798;DP=2814;DP4=1255,1332,25,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.35898e-22;MQSB=0.99991;RPB=0.698427;SGB=34.6966;VDB=0.00160395;EFF=INTRON(MODIFIER||||80|LOC_Os11g19260|protein_coding|CODING|LOC_Os11g19260.1|1|1) FN3713-S.SNP.11:11025354 chr11:011025354 0 W/11025354-11025354 FN3713-S SNP A -> C AC=2;AN=190;BQB=0.928671;DP=2396;DP4=1108,1158,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.39031e-15;MQSB=0.853827;RPB=0.334839;SGB=135.619;VDB=0.929008;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.11:11028920 chr11:011028920 0 W/11028920-11028920 FN3384-S SNP G -> C AC=1;AN=184;BQB=0.96451;DP=2906;DP4=1241,1545,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.12352e-08;MQSB=0.971025;RPB=0.661052;SGB=35.7479;VDB=0.141866;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.11:11030967 chr11:011030967 0 W/11030967-11030967 FN2178-S SNP A -> G AC=2;AN=168;BQB=0.627095;DP=3371;DP4=1711,1588,21,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.29876e-16;MQSB=0.991576;RPB=0.368475;SGB=-141.738;VDB=0.192743;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.11:11034489 chr11:011034489 0 W/11034489-11034489 FN3697-S SNP G -> C AC=2;AN=190;BQB=0.565972;DP=3117;DP4=1582,1378,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.39019e-16;MQSB=0.969605;RPB=0.763838;SGB=100.07;VDB=0.943147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.11:11037880 chr11:011037880 0 W/11037880-11037880 FN1669-S SNP C -> T AC=2;AN=188;BQB=0.65569;DP=1426;DP4=717,643,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.56613e-10;MQSB=0.369811;RPB=0.882135;SGB=76.2387;VDB=0.05363;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.11:11038732 chr11:011038732 0 W/11038732-11038732 W278-3-1 Single Base Substitution C-G INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN_786-4-1.SNP.11:11043209 chr11:011043209 0 W/11043209-11043209 FN_786-4-1 Single Base Substitution T-C Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN4302-S.SNP.11:11044331 chr11:011044331 0 W/11044331-11044331 FN4302-S SNP G -> A AC=2;AN=170;BQB=0.975576;DP=2493;DP4=1354,1066,16,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.23847e-12;MQSB=0.978846;RPB=0.993512;SGB=101.184;VDB=0.889079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.11:11048165 chr11:011048165 0 W/11048165-11048165 FN1243-S Single Base Substitution G-T INTRON HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2541-S.SNP.11:11053096 chr11:011053096 0 W/11053096-11053096 FN2541-S SNP T -> C AC=1;AN=198;BQB=0.546521;DP=4609;DP4=2029,2368,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0547e-14;MQSB=0.987206;RPB=0.0905742;SGB=25.3006;VDB=0.0542544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2098-S.SNP.11:11053337 chr11:011053337 0 W/11053337-11053337 FN2098-S SNP G -> A AC=2;AN=168;BQB=0.734591;DP=3843;DP4=1934,1830,28,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.47647e-28;MQSB=0.996978;RPB=0.952761;SGB=-118.282;VDB=0.9818;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.11:11058115 chr11:011058115 0 W/11058115-11058115 W278-3-1 Single Base Substitution T-C INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1414-S.SNP.11:11065363 chr11:011065363 0 W/11065363-11065363 FN1414-S Single Base Substitution G-A INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2269-S.SNP.11:11067949 chr11:011067949 0 W/11067949-11067949 FN2269-S SNP C -> A AC=2;AN=190;BQB=0.173866;DP=4533;DP4=2190,1992,21,26;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33952e-24;MQSB=0.263329;RPB=0.54836;SGB=105.384;VDB=0.193581;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.11:11071945 chr11:011071945 0 W/11071945-11071945 FN454-S Single Base Substitution C-T INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN3459-S.SNP.11:11082768 chr11:011082768 0 W/11082768-11082768 FN3459-S SNP G -> A AC=1;AN=184;BQB=0.935705;DP=2831;DP4=1420,1342,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000197396;MQSB=0.999917;RPB=0.994441;SGB=30.6558;VDB=0.299782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3825-S.SNP.11:11085493 chr11:011085493 0 W/11085493-11085493 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.972256;DP=2531;DP4=1292,1136,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.36272e-07;MQSB=0.987899;RPB=0.839001;SGB=49.0954;VDB=0.44694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.11:11088135 chr11:011088135 0 W/11088135-11088135 FN1213-S Single Base Substitution G-A INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2702-S.SNP.11:11093038 chr11:011093038 0 W/11093038-11093038 FN2702-S SNP A -> G AC=1;AN=200;BQB=0.726391;DP=5261;DP4=2393,2650,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38747e-10;MQSB=0.813531;RPB=0.745951;SGB=61.9006;VDB=0.799558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.11:11094410 chr11:011094410 0 W/11094410-11094410 FN1557-S Single Base Substitution T-C INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1124-S.SNP.11:11101912 chr11:011101912 0 W/11101912-11101912 FN1124-S Single Base Substitution A-G INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN891-S.SNP.11:11106939 chr11:011106939 0 W/11106939-11106939 FN891-S Single Base Substitution A-T INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN1060-S.SNP.11:11107428 chr11:011107428 0 W/11107428-11107428 FN1060-S Single Base Substitution T-C INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2594-S.SNP.11:11110665 chr11:011110665 0 W/11110665-11110665 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.937762;DP=4239;DP4=2157,1832,6,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.78203e-05;MQSB=0.77536;RPB=0.88667;SGB=22.1736;VDB=0.310568;EFF=UTR_3_PRIME(MODIFIER||64||460|LOC_Os11g19340|protein_coding|CODING|LOC_Os11g19340.1|1|1) FN1504-S.SNP.11:11121747 chr11:011121747 0 W/11121747-11121747 FN1504-S Single Base Substitution T-A INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN654-S.SNP.11:11123206 chr11:011123206 0 W/11123206-11123206 FN654-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g19350 retrotransposon protein, putative, unclassified, expressed SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN715-S.SNP.11:11130077 chr11:011130077 0 W/11130077-11130077 FN715-S Single Base Substitution G-A INTRON HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN2467.SNP.11:11133786 chr11:011133786 0 W/11133786-11133786 FN2467 SNP A -> G AC=1;AN=200;BQB=0.608559;DP=4638;DP4=2090,1968,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.89104e-06;MQSB=0.748263;RPB=0.940842;SGB=-13.7154;VDB=0.929169;EFF=INTRON(MODIFIER||||433|LOC_Os11g19360|protein_coding|CODING|LOC_Os11g19360.1|4|1) FN3485-S.SNP.11:11139691 chr11:011139691 0 W/11139691-11139691 FN3485-S SNP A -> T AC=2;AN=184;BQB=0.989673;DP=4069;DP4=1706,2089,25,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.73346e-26;MQSB=0.997834;RPB=0.305509;SGB=0.939641;VDB=0.354081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.11:11139692 chr11:011139692 0 W/11139692-11139692 FN3485-S SNP G -> T AC=2;AN=184;BQB=0.894752;DP=4070;DP4=1757,2180,22,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.67499e-26;MQSB=0.951441;RPB=0.0861362;SGB=197.961;VDB=0.173197;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.11:11141391 chr11:011141391 0 W/11141391-11141391 FN-195 Single Base Substitution T-A INTERGENIC HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3743-S.SNP.11:11141855 chr11:011141855 0 W/11141855-11141855 FN3743-S SNP G -> T AC=2;AN=190;BQB=0.945775;DP=2999;DP4=1504,1323,19,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.89109e-17;MQSB=0.99922;RPB=0.992256;SGB=103.624;VDB=0.301315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.11:11144099 chr11:011144099 0 W/11144099-11144099 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.948425;DP=4858;DP4=2317,2183,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50215e-11;MQSB=0.828111;RPB=0.584482;SGB=38.983;VDB=0.574691;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.11:11144807 chr11:011144807 0 W/11144807-11144807 FN460-S Single Base Substitution T-G INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3386-S.SNP.11:11145900 chr11:011145900 0 W/11145900-11145900 FN3386-S SNP C -> T AC=1;AN=184;BQB=0.999908;DP=3233;DP4=1644,1438,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=7.3534e-05;MQSB=0.93909;RPB=0.941993;SGB=53.2642;VDB=0.656653;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A66T|151|LOC_Os11g19370|protein_coding|CODING|LOC_Os11g19370.1|1|1) FN3944-S.SNP.11:11147450 chr11:011147450 0 W/11147450-11147450 FN3944-S SNP A -> T AC=2;AN=168;BQB=0.998755;DP=2647;DP4=1180,1363,14,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.91611e-16;MQSB=0.99963;RPB=0.853831;SGB=-10.6335;VDB=0.625791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.11:11151639 chr11:011151639 0 W/11151639-11151639 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.936687;DP=4622;DP4=1831,2433,11,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00432713;MQB=6.74643e-10;MQSB=0.98404;RPB=0.991273;SGB=32.0901;VDB=0.291978;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S204P|874|LOC_Os11g19380|protein_coding|CODING|LOC_Os11g19380.1|2|1) FN2629-S.SNP.11:11153742 chr11:011153742 0 W/11153742-11153742 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.98384;DP=4688;DP4=2343,2109,9,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.7896e-07;MQSB=0.00126045;RPB=0.370866;SGB=-12.5051;VDB=0.965543;EFF=INTRON(MODIFIER||||874|LOC_Os11g19380|protein_coding|CODING|LOC_Os11g19380.1|4|1) FN4107-S.SNP.11:11155328 chr11:011155328 0 W/11155328-11155328 FN4107-S SNP C -> T AC=2;AN=182;BQB=0.713469;DP=3395;DP4=1792,1526,8,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.26963e-09;MQSB=0.768282;RPB=0.714832;SGB=84.7091;VDB=0.729006;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N219|425|LOC_Os11g19390|protein_coding|CODING|LOC_Os11g19390.1|1|1) FN3951-S.SNP.11:11156048 chr11:011156048 0 W/11156048-11156048 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.893577;DP=3014;DP4=1506,1399,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.46767e-08;MQSB=0.00243943;RPB=0.283107;SGB=61.0344;VDB=0.0634776;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S399|425|LOC_Os11g19390|protein_coding|CODING|LOC_Os11g19390.1|2|1) FN1688-S.SNP.11:11157493 chr11:011157493 0 W/11157493-11157493 FN1688-S SNP T -> A AC=1;AN=188;BQB=0.455984;DP=2129;DP4=1129,955,3,10;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00704556;MQB=8.71182e-05;MQSB=9.89548e-06;RPB=0.999999;SGB=-16.6296;VDB=0.83439;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E340V|488|LOC_Os11g19400|protein_coding|CODING|LOC_Os11g19400.1|6|1) FN1688-S.SNP.11:11157494 chr11:011157494 0 W/11157494-11157494 FN1688-S SNP C -> A AC=1;AN=188;BQB=0.930921;DP=2142;DP4=1136,972,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0070028;MQB=0.000172235;MQSB=7.01913e-06;RPB=0.7302;SGB=25.3545;VDB=0.853504;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E340*|488|LOC_Os11g19400|protein_coding|CODING|LOC_Os11g19400.1|6|1) FN2533-S.SNP.11:11157804 chr11:011157804 0 W/11157804-11157804 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.716984;DP=3844;DP4=1691,1844,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00104058;MQB=6.04627e-07;MQSB=0.0988147;RPB=0.552773;SGB=29.3637;VDB=0.36925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D269Y|488|LOC_Os11g19400|protein_coding|CODING|LOC_Os11g19400.1|5|1),SPLICE_SITE_REGION(LOW||||488|LOC_Os11g19400|protein_coding|CODING|LOC_Os11g19400.1|5|1) FN3363-S.SNP.11:11159133 chr11:011159133 0 W/11159133-11159133 FN3363-S SNP C -> G AC=1;AN=184;BQB=0.82268;DP=3167;DP4=1431,1630,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000315756;MQB=1.37647e-10;MQSB=0.309264;RPB=0.656626;SGB=60.4004;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.11:11159657 chr11:011159657 0 W/11159657-11159657 FN1203-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-157.SNP.11:11164030 chr11:011164030 0 W/11164030-11164030 FN-157 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g19420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN3413-S.SNP.11:11166831 chr11:011166831 0 W/11166831-11166831 FN3413-S SNP C -> G AC=1;AN=184;BQB=0.978749;DP=3160;DP4=1483,1605,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00316456;MQB=7.83599e-08;MQSB=0.726598;RPB=0.662064;SGB=39.2697;VDB=0.768163;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Gac|H1052D|1409|LOC_Os11g19420|protein_coding|CODING|LOC_Os11g19420.1|3|1) FN3391-S.SNP.11:11168961 chr11:011168961 0 W/11168961-11168961 FN3391-S SNP G -> T AC=1;AN=184;BQB=0.883292;DP=2984;DP4=1574,1266,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00536193;MQB=1.08932e-05;MQSB=0.0066243;RPB=0.9593;SGB=44.2207;VDB=0.260266;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.11:11171187 chr11:011171187 0 W/11171187-11171187 FN-155 Single Base Substitution C-T INTERGENIC HOMO SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN756-S.SNP.11:11171363 chr11:011171363 0 W/11171363-11171363 FN756-S Single Base Substitution G-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN1356-S.SNP.11:11177215 chr11:011177215 0 W/11177215-11177215 FN1356-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g19430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2325.SNP.11:11177450 chr11:011177450 0 W/11177450-11177450 FN2325 SNP G -> C AC=1;AN=192;BQB=0.357118;DP=5806;DP4=3217,2319,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=31;MQ0F=0.105753;MQB=0.610286;MQSB=2.51248e-13;RPB=0.649159;SGB=43.3444;VDB=0.579506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K992N|1636|LOC_Os11g19430|protein_coding|CODING|LOC_Os11g19430.1|2|1) FN1384-S.SNP.11:11179070 chr11:011179070 0 W/11179070-11179070 FN1384-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-311.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN-311 Single Base Substitution G-A INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN-9.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN-9 Single Base Substitution G-A INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN1704-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN1704-S SNP G -> A AC=2;AN=188;BQB=0.949938;DP=1442;DP4=349,1049,8,8;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=6.32005e-07;MQSB=0.987931;RPB=0.304069;SGB=26.0762;VDB=0.0554092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN2317 SNP G -> A AC=2;AN=192;BQB=0.999365;DP=4562;DP4=1637,2424,12,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000219202;MQB=2.78347e-14;MQSB=0.0862442;RPB=0.248948;SGB=95.587;VDB=0.585059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN2674-S SNP G -> A AC=2;AN=200;BQB=0.401519;DP=4481;DP4=1611,2548,19,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.77549e-26;MQSB=0.967004;RPB=0.829644;SGB=162.845;VDB=0.445259;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN3493-S SNP G -> A AC=2;AN=184;BQB=0.995786;DP=3307;DP4=1504,1675,25,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.55175e-18;MQSB=0.917489;RPB=0.959562;SGB=170.831;VDB=0.910866;EFF=INTERGENIC(MODIFIER||||||||||1) FN3712-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN3712-S SNP G -> A AC=2;AN=190;BQB=0.999459;DP=2073;DP4=847,1124,5,14;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.13655e-08;MQSB=0.741407;RPB=0.983872;SGB=57.4238;VDB=0.521456;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.778655;DP=2652;DP4=1174,1360,14,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.48976e-08;MQSB=0.905307;RPB=0.501307;SGB=90.0802;VDB=0.975273;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN3865-S SNP G -> A AC=2;AN=158;BQB=0.715663;DP=2445;DP4=1069,1275,11,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.33592e-12;MQSB=0.79031;RPB=0.787006;SGB=95.131;VDB=0.736993;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN4116-S SNP G -> A AC=2;AN=182;BQB=0.982968;DP=2757;DP4=1213,1435,20,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.37123e-15;MQSB=0.415386;RPB=0.972397;SGB=170.415;VDB=0.779132;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN514-S Single Base Substitution G-A INTERGENIC HOMO SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN742-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN742-S Single Base Substitution G-A INTERGENIC HOMO SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN778-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN778-S Single Base Substitution G-A INTERGENIC HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN899-S.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN899-S Single Base Substitution G-A INTERGENIC HOMO SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN_N2-29a-1.SNP.11:11179822 chr11:011179822 0 W/11179822-11179822 FN_N2-29a-1 Single Base Substitution G-A Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN673-S.SNP.11:11183588 chr11:011183588 0 W/11183588-11183588 FN673-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN2155-S.SNP.11:11185352 chr11:011185352 0 W/11185352-11185352 FN2155-S SNP G -> T AC=1;AN=168;BQB=0.259728;DP=3857;DP4=2220,1584,17,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.62391e-07;MQSB=0.996533;RPB=0.883145;SGB=12.7756;VDB=0.0980804;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.11:11187076 chr11:011187076 0 W/11187076-11187076 FN1299-S Single Base Substitution G-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2281.SNP.11:11188850 chr11:011188850 0 W/11188850-11188850 FN2281 SNP C -> T AC=1;AN=192;BQB=0.797182;DP=5054;DP4=2447,2295,11,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000197863;MQB=1.81139e-05;MQSB=0.550158;RPB=0.751295;SGB=64.7304;VDB=0.184486;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.11:11192834 chr11:011192834 0 W/11192834-11192834 FN-153 Single Base Substitution A-C INTRON HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN1513-S.SNP.11:11193685 chr11:011193685 0 W/11193685-11193685 FN1513-S Single Base Substitution A-C INTRON HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1513-S.SNP.11:11193692 chr11:011193692 0 W/11193692-11193692 FN1513-S Single Base Substitution C-A INTRON HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1551-S.SNP.11:11194737 chr11:011194737 0 W/11194737-11194737 FN1551-S Single Base Substitution C-A INTRON HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN2664-S.SNP.11:11198798 chr11:011198798 0 W/11198798-11198798 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.682487;DP=4905;DP4=2392,2146,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.03678e-13;MQSB=0.847829;RPB=0.99968;SGB=100.316;VDB=0.0314092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:11199616 chr11:011199616 0 W/11199616-11199616 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.992627;DP=4506;DP4=2287,1942,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.31218e-11;MQSB=0.712608;RPB=0.835923;SGB=-10.8602;VDB=0.919495;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.11:11209195 chr11:011209195 0 W/11209195-11209195 FN1114-S Single Base Substitution A-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3993-S.SNP.11:11214711 chr11:011214711 0 W/11214711-11214711 FN3993-S SNP A -> T AC=2;AN=168;BQB=0.477714;DP=2775;DP4=1278,1370,10,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.58217e-11;MQSB=0.998629;RPB=0.996883;SGB=19.9297;VDB=0.787879;EFF=INTERGENIC(MODIFIER||||||||||1) FN3432-S.SNP.11:11227431 chr11:011227431 0 W/11227431-11227431 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.906118;DP=2686;DP4=1335,1245,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.50546e-11;MQSB=0.896796;RPB=0.838864;SGB=35.884;VDB=0.12166;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.11:11234730 chr11:011234730 0 W/11234730-11234730 FN1557-S Single Base Substitution A-G INTERGENIC Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN3432-S.SNP.11:11248705 chr11:011248705 0 W/11248705-11248705 FN3432-S SNP C -> G AC=1;AN=184;BQB=0.875824;DP=3795;DP4=1749,1946,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000527009;MQB=1.64892e-14;MQSB=0.853011;RPB=0.224973;SGB=103.004;VDB=0.214742;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R1261T|1590|LOC_Os11g19520|protein_coding|CODING|LOC_Os11g19520.1|5|1) FN1392-S.SNP.11:11252415 chr11:011252415 0 W/11252415-11252415 FN1392-S Single Base Substitution C-A SYNONYMOUS_CODING HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN1097-S.SNP.11:11253439 chr11:011253439 0 W/11253439-11253439 FN1097-S Single Base Substitution A-G INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3407-S.SNP.11:11253574 chr11:011253574 0 W/11253574-11253574 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.942383;DP=3534;DP4=1501,1958,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.83871e-05;MQSB=0.781205;RPB=0.357636;SGB=35.1773;VDB=0.898924;EFF=INTERGENIC(MODIFIER||||||||||1) FN785-S.SNP.11:11253626 chr11:011253626 0 W/11253626-11253626 FN785-S Single Base Substitution A-T INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN824-S.SNP.11:11255454 chr11:011255454 0 W/11255454-11255454 FN824-S Single Base Substitution C-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN824-S.SNP.11:11255455 chr11:011255455 0 W/11255455-11255455 FN824-S Single Base Substitution A-T INTERGENIC HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN2545-S.SNP.11:11256251 chr11:011256251 0 W/11256251-11256251 FN2545-S SNP T -> A AC=2;AN=198;BQB=0.444062;DP=4166;DP4=1945,2002,16,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.6255e-16;MQSB=0.872726;RPB=0.793567;SGB=90.4807;VDB=0.650442;EFF=INTERGENIC(MODIFIER||||||||||1) FN1483-S.SNP.11:11257689 chr11:011257689 0 W/11257689-11257689 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN4152-S.SNP.11:11257689 chr11:011257689 0 W/11257689-11257689 FN4152-S SNP G -> A AC=2;AN=170;BQB=0.899935;DP=2395;DP4=1242,1072,15,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.53734e-14;MQSB=0.938156;RPB=0.919891;SGB=114.512;VDB=0.126449;EFF=INTERGENIC(MODIFIER||||||||||1) FN1731-S.SNP.11:11266808 chr11:011266808 0 W/11266808-11266808 FN1731-S SNP G -> C AC=2;AN=188;BQB=0.894575;DP=2006;DP4=946,1003,12,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.30286e-11;MQSB=0.999979;RPB=0.970643;SGB=41.3359;VDB=0.715181;EFF=INTRON(MODIFIER||||493|LOC_Os11g19550|protein_coding|CODING|LOC_Os11g19550.1|5|1) FN-199.SNP.11:11272610 chr11:011272610 0 W/11272610-11272610 FN-199 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2235-S.SNP.11:11277351 chr11:011277351 0 W/11277351-11277351 FN2235-S SNP T -> C AC=2;AN=190;BQB=0.923258;DP=5308;DP4=2550,2439,18,27;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.000565185;MQB=2.51371e-07;MQSB=0.0136501;RPB=0.997339;SGB=149.825;VDB=0.133379;EFF=INTRON(MODIFIER||||1032|LOC_Os11g19570|protein_coding|CODING|LOC_Os11g19570.1|5|1) FN3282-S.SNP.11:11283348 chr11:011283348 0 W/11283348-11283348 FN3282-S SNP A -> T AC=1;AN=184;BQB=0.372395;DP=2813;DP4=1463,1212,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.41433e-06;MQSB=0.636316;RPB=0.587994;SGB=20.7533;VDB=0.58437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3550-S.SNP.11:11288792 chr11:011288792 0 W/11288792-11288792 FN3550-S SNP A -> G AC=1;AN=188;BQB=0.949858;DP=3278;DP4=1556,1591,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.40881e-12;MQSB=0.936241;RPB=0.780844;SGB=64.3306;VDB=0.319556;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.11:11289367 chr11:011289367 0 W/11289367-11289367 FN4032-S SNP G -> A AC=2;AN=168;BQB=0.992665;DP=2618;DP4=1159,1334,11,27;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=1.40332e-12;MQSB=0.678073;RPB=0.879516;SGB=162.943;VDB=0.533291;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.11:11292139 chr11:011292139 0 W/11292139-11292139 FN577-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g19590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN1537-S.SNP.11:11292595 chr11:011292595 0 W/11292595-11292595 FN1537-S Single Base Substitution C-T STOP_GAINED Homo LOC_Os11g19590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2707-S.SNP.11:11292831 chr11:011292831 0 W/11292831-11292831 FN2707-S SNP G -> A AC=1;AN=200;BQB=0.995014;DP=4839;DP4=2372,2257,7,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.28233e-05;MQSB=0.11486;RPB=0.587564;SGB=49.6594;VDB=0.678262;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R309|586|LOC_Os11g19590|protein_coding|CODING|LOC_Os11g19590.1|6|1) FN1399-S.SNP.11:11294587 chr11:011294587 0 W/11294587-11294587 FN1399-S Single Base Substitution G-A INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN892-S.SNP.11:11297706 chr11:011297706 0 W/11297706-11297706 FN892-S Single Base Substitution C-A INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN756-S.SNP.11:11299662 chr11:011299662 0 W/11299662-11299662 FN756-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN-72.SNP.11:11301773 chr11:011301773 0 W/11301773-11301773 FN-72 Single Base Substitution C-T INTRON HET SNo: 72, Mutant_ID: FN-72, Generation: M2, Mutations: 66, Genes: 6, Seed availability: Yes. FN2252-S.SNP.11:11307815 chr11:011307815 0 W/11307815-11307815 FN2252-S SNP C -> A AC=1;AN=190;BQB=0.320607;DP=4755;DP4=2185,2251,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00483701;MQB=9.24837e-05;MQSB=0.808218;RPB=0.706073;SGB=28.7675;VDB=0.852751;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.11:11308733 chr11:011308733 0 W/11308733-11308733 FN786-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3712-S.SNP.11:11313384 chr11:011313384 0 W/11313384-11313384 FN3712-S SNP C -> G AC=1;AN=190;BQB=0.970418;DP=2834;DP4=1226,1484,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.00734e-13;MQSB=0.800927;RPB=0.825876;SGB=44.0907;VDB=0.620534;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.11:11313522 chr11:011313522 0 W/11313522-11313522 FN1533-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g19630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1533-S.SNP.11:11313524 chr11:011313524 0 W/11313524-11313524 FN1533-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g19630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN961-S.SNP.11:11314293 chr11:011314293 0 W/11314293-11314293 FN961-S Single Base Substitution A-T INTRON HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2299.SNP.11:11315442 chr11:011315442 0 W/11315442-11315442 FN2299 SNP C -> A AC=2;AN=192;BQB=0.858622;DP=4659;DP4=2166,2116,22,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00450741;MQB=5.52686e-20;MQSB=0.985133;RPB=0.960811;SGB=90.4583;VDB=0.48351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P419T|582|LOC_Os11g19630|protein_coding|CODING|LOC_Os11g19630.1|3|1) FN2151-S.SNP.11:11318811 chr11:011318811 0 W/11318811-11318811 FN2151-S SNP A -> T AC=2;AN=168;BQB=0.102377;DP=3956;DP4=1889,1986,25,29;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000252781;MQB=1.00455e-24;MQSB=0.0005189;RPB=0.82111;SGB=-116.713;VDB=0.69276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E665D|1080|LOC_Os11g19640|protein_coding|CODING|LOC_Os11g19640.1|3|1) FN3535-S.SNP.11:11323253 chr11:011323253 0 W/11323253-11323253 FN3535-S SNP G -> A AC=1;AN=188;BQB=0.966118;DP=2756;DP4=1403,1304,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.33038e-07;MQSB=0.504724;RPB=0.901643;SGB=44.4357;VDB=0.0720988;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G184|559|LOC_Os11g19650|protein_coding|CODING|LOC_Os11g19650.1|2|1) FN1484-S.SNP.11:11327156 chr11:011327156 0 W/11327156-11327156 FN1484-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os11g19660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN3722-S.SNP.11:11329202 chr11:011329202 0 W/11329202-11329202 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.982227;DP=3005;DP4=1517,1372,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.25446e-09;MQSB=0.970524;RPB=0.00991058;SGB=58.2031;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.11:11329335 chr11:011329335 0 W/11329335-11329335 FN1119-S Single Base Substitution G-C INTERGENIC HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN660-S.SNP.11:11336351 chr11:011336351 0 W/11336351-11336351 FN660-S Single Base Substitution G-A INTRON HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN2421.SNP.11:11336368 chr11:011336368 0 W/11336368-11336368 FN2421 SNP C -> T AC=1;AN=200;BQB=0.877188;DP=4586;DP4=2354,1963,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06399e-06;MQSB=0.996978;RPB=0.887369;SGB=40.4492;VDB=0.237603;EFF=INTRON(MODIFIER||||214|LOC_Os11g19690|protein_coding|CODING|LOC_Os11g19690.1|3|1) FN1532-S.SNP.11:11352503 chr11:011352503 0 W/11352503-11352503 FN1532-S Single Base Substitution T-A INTRON HET SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2361.SNP.11:11357205 chr11:011357205 0 W/11357205-11357205 FN2361 SNP T -> C AC=2;AN=192;BQB=0.992963;DP=4791;DP4=2204,2216,29,35;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.0025047;MQB=4.57284e-31;MQSB=0.179687;RPB=0.872825;SGB=80.8792;VDB=0.706372;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.11:11358124 chr11:011358124 0 W/11358124-11358124 FN3508-S SNP G -> C AC=2;AN=188;BQB=0.980166;DP=4067;DP4=2080,1649,25,25;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00147529;MQB=2.71116e-17;MQSB=5.59907e-07;RPB=0.91197;SGB=221.624;VDB=0.482234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.11:11360468 chr11:011360468 0 W/11360468-11360468 FN1749-S SNP T -> G AC=2;AN=188;BQB=0.878066;DP=2481;DP4=1513,913,21,11;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00846433;MQB=2.17909e-07;MQSB=0.0622189;RPB=0.651232;SGB=-42.845;VDB=0.0712823;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.11:11360475 chr11:011360475 0 W/11360475-11360475 FN-400 Single Base Substitution C-T INTERGENIC HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN3535-S.SNP.11:11361137 chr11:011361137 0 W/11361137-11361137 FN3535-S SNP T -> C AC=2;AN=188;BQB=0.998021;DP=2797;DP4=1528,1177,15,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48478e-12;MQSB=0.68087;RPB=0.547453;SGB=94.4119;VDB=0.16221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.11:11364761 chr11:011364761 0 W/11364761-11364761 FN2204-S SNP T -> C AC=1;AN=190;BQB=0.837785;DP=4948;DP4=1996,2483,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28234e-12;MQSB=0.808115;RPB=0.445535;SGB=-11.5603;VDB=0.0469223;EFF=INTRON(MODIFIER||||430|LOC_Os11g19720|protein_coding|CODING|LOC_Os11g19720.1|5|1) FN2103-S.SNP.11:11369445 chr11:011369445 0 W/11369445-11369445 FN2103-S SNP C -> T AC=2;AN=168;BQB=0.968961;DP=1918;DP4=857,1004,2,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000215751;MQSB=0.947464;RPB=0.858465;SGB=30.0193;VDB=0.351291;EFF=INTERGENIC(MODIFIER||||||||||1) FN3868-S.SNP.11:11373422 chr11:011373422 0 W/11373422-11373422 FN3868-S SNP A -> T AC=1;AN=158;BQB=0.998439;DP=2250;DP4=1051,1114,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000298876;MQSB=0.947684;RPB=0.261817;SGB=17.2267;VDB=0.163924;EFF=INTRON(MODIFIER||||772|LOC_Os11g19730|protein_coding|CODING|LOC_Os11g19730.1|1|1) W385-6-8-4.SNP.11:11389112 chr11:011389112 0 W/11389112-11389112 W385-6-8-4 Single Base Substitution C-A INTRON HOMO SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3293-S.SNP.11:11389421 chr11:011389421 0 W/11389421-11389421 FN3293-S SNP T -> A AC=1;AN=184;BQB=0.817841;DP=2621;DP4=1229,1257,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.48604e-09;MQSB=0.985886;RPB=0.405843;SGB=57.786;VDB=0.601655;EFF=INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.1|4|1),INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.2|4|1),INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.3|4|1) FN3293-S.SNP.11:11389422 chr11:011389422 0 W/11389422-11389422 FN3293-S SNP T -> A AC=1;AN=184;BQB=0.811118;DP=2607;DP4=1234,1255,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.22887e-10;MQSB=0.996235;RPB=0.292132;SGB=8.32411;VDB=0.417075;EFF=INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.1|4|1),INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.2|4|1),INTRON(MODIFIER||||98|LOC_Os11g19764|protein_coding|CODING|LOC_Os11g19764.3|4|1) FN3110-S.SNP.11:11393110 chr11:011393110 0 W/11393110-11393110 FN3110-S SNP T -> A AC=1;AN=184;BQB=0.924087;DP=2689;DP4=963,1516,4,15;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.4166e-08;MQSB=0.726744;RPB=0.652416;SGB=80.3949;VDB=0.0822431;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.11:11393337 chr11:011393337 0 W/11393337-11393337 FN-120 Single Base Substitution G-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2204-S.SNP.11:11393813 chr11:011393813 0 W/11393813-11393813 FN2204-S SNP T -> C AC=1;AN=190;BQB=0.991164;DP=3281;DP4=1895,952,12,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000304785;MQB=4.61537e-07;MQSB=0.60208;RPB=0.77656;SGB=11.8805;VDB=0.854224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.11:11395989 chr11:011395989 0 W/11395989-11395989 FN2790-S SNP T -> A AC=2;AN=198;BQB=0.753045;DP=4363;DP4=2001,2103,28,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.75407e-28;MQSB=0.966354;RPB=0.698921;SGB=173.168;VDB=0.814126;EFF=START_GAINED(LOW||||54|LOC_Os11g19780|protein_coding|CODING|LOC_Os11g19780.1|1|1),UTR_5_PRIME(MODIFIER||82||54|LOC_Os11g19780|protein_coding|CODING|LOC_Os11g19780.1|1|1) FN2499.SNP.11:11401154 chr11:011401154 0 W/11401154-11401154 FN2499 SNP T -> A AC=1;AN=200;BQB=0.0427895;DP=3329;DP4=1194,1988,2,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.56705e-05;MQSB=0.861767;RPB=0.73807;SGB=21.6694;VDB=0.555212;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.11:11403867 chr11:011403867 0 W/11403867-11403867 FN463-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g19790 O-methyltransferase, putative, expressed SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1492-S.SNP.11:11408294 chr11:011408294 0 W/11408294-11408294 FN1492-S Single Base Substitution G-C INTERGENIC HET SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2794-S.SNP.11:11410781 chr11:011410781 0 W/11410781-11410781 FN2794-S SNP T -> C AC=2;AN=198;BQB=0.999664;DP=4138;DP4=1933,1965,25,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.46698e-28;MQSB=0.999433;RPB=0.881853;SGB=169.573;VDB=0.409868;EFF=SPLICE_SITE_REGION(LOW||||151|LOC_Os11g19800|protein_coding|CODING|LOC_Os11g19800.1|6|1),INTRON(MODIFIER||||151|LOC_Os11g19800|protein_coding|CODING|LOC_Os11g19800.1|6|1) FN3890-S.SNP.11:11413129 chr11:011413129 0 W/11413129-11413129 FN3890-S SNP T -> C AC=1;AN=158;BQB=0.870229;DP=2407;DP4=1234,1058,18,17;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.33775e-18;MQSB=0.999929;RPB=0.999263;SGB=29.4751;VDB=0.594563;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S627|1040|LOC_Os11g19810|protein_coding|CODING|LOC_Os11g19810.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S642|1055|LOC_Os11g19810|protein_coding|CODING|LOC_Os11g19810.1|3|1) FN-160.SNP.11:11423503 chr11:011423503 0 W/11423503-11423503 FN-160 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1545-S.SNP.11:11424069 chr11:011424069 0 W/11424069-11424069 FN1545-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g19830 retrotransposon protein, putative, unclassified, expressed SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN_935-1.SNP.11:11429095 chr11:011429095 0 W/11429095-11429095 FN_935-1 Single Base Substitution G-A HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN3283-S.SNP.11:11434343 chr11:011434343 0 W/11434343-11434343 FN3283-S SNP G -> A AC=1;AN=184;BQB=0.8596;DP=3760;DP4=1734,1916,6,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.54443e-13;MQSB=0.283809;RPB=0.986767;SGB=12.8895;VDB=0.532112;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G88|277|LOC_Os11g19850|protein_coding|CODING|LOC_Os11g19850.1|1|1) FN2197-S.SNP.11:11434487 chr11:011434487 0 W/11434487-11434487 FN2197-S SNP C -> T AC=1;AN=190;BQB=0.0737934;DP=4362;DP4=2157,1935,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000229253;MQB=1.60367e-07;MQSB=0.153586;RPB=0.543824;SGB=4.11112;VDB=0.801753;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A136|277|LOC_Os11g19850|protein_coding|CODING|LOC_Os11g19850.1|1|1) FN1759-S.SNP.11:11442832 chr11:011442832 0 W/11442832-11442832 FN1759-S SNP G -> T AC=1;AN=188;BQB=0.543146;DP=3852;DP4=2029,1789,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.93689e-08;MQSB=0.958717;RPB=0.754834;SGB=-37.8212;VDB=0.150242;EFF=INTRON(MODIFIER||||434|LOC_Os11g19864|protein_coding|CODING|LOC_Os11g19864.1|1|1) FN1283-S.SNP.11:11443687 chr11:011443687 0 W/11443687-11443687 FN1283-S Single Base Substitution T-A INTRON HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1658-S.SNP.11:11448423 chr11:011448423 0 W/11448423-11448423 FN1658-S SNP C -> A AC=1;AN=188;BQB=2.87354e-21;DP=4043;DP4=1930,1970,50,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000334435;MQSB=0.0658065;RPB=0.0377015;SGB=-1707.16;VDB=0.107007;EFF=INTERGENIC(MODIFIER||||||||||1) FN764-S.SNP.11:11448769 chr11:011448769 0 W/11448769-11448769 FN764-S Single Base Substitution A-G INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN479-S.SNP.11:11448945 chr11:011448945 0 W/11448945-11448945 FN479-S Single Base Substitution C-G INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2242-S.SNP.11:11449200 chr11:011449200 0 W/11449200-11449200 FN2242-S SNP A -> T AC=1;AN=190;BQB=0.0504358;DP=5262;DP4=2609,2418,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35457e-08;MQSB=0.717974;RPB=0.999115;SGB=53.6492;VDB=0.681619;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.11:11452928 chr11:011452928 0 W/11452928-11452928 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.783326;DP=2933;DP4=1458,1393,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.11939e-07;MQSB=0.948781;RPB=0.60048;SGB=15.7097;VDB=0.53677;EFF=INTRON(MODIFIER||||603|LOC_Os11g19880|protein_coding|CODING|LOC_Os11g19880.1|3|1) FN957-S.SNP.11:11454483 chr11:011454483 0 W/11454483-11454483 FN957-S Single Base Substitution T-C INTRON HET SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN3479-S.SNP.11:11460374 chr11:011460374 0 W/11460374-11460374 FN3479-S SNP C -> T AC=2;AN=184;BQB=0.808897;DP=3179;DP4=1762,1323,16,12;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00534759;MQB=1.61668e-07;MQSB=0.0109813;RPB=0.930353;SGB=56.0583;VDB=0.0944219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.11:11462474 chr11:011462474 0 W/11462474-11462474 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.922477;DP=1179;DP4=738,301,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.25042e-05;MQSB=1.19588e-05;RPB=0.919258;SGB=32.5467;VDB=0.971802;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.11:11467671 chr11:011467671 0 W/11467671-11467671 FN3326-S SNP C -> T AC=2;AN=184;BQB=0.992059;DP=2969;DP4=1225,1630,8,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000336814;MQB=9.78174e-16;MQSB=0.997318;RPB=0.22542;SGB=88.5747;VDB=0.128779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S10N|1436|LOC_Os11g19910|protein_coding|CODING|LOC_Os11g19910.1|1|1) FN4142-S.SNP.11:11472554 chr11:011472554 0 W/11472554-11472554 FN4142-S SNP C -> A AC=1;AN=170;BQB=0.972772;DP=1780;DP4=943,730,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.87814e-07;MQSB=0.564652;RPB=0.551421;SGB=56.7575;VDB=0.366445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A42E|432|LOC_Os11g19930|protein_coding|CODING|LOC_Os11g19930.1|1|1),SPLICE_SITE_REGION(LOW||||432|LOC_Os11g19930|protein_coding|CODING|LOC_Os11g19930.1|1|1) FN2372.SNP.11:11473574 chr11:011473574 0 W/11473574-11473574 FN2372 SNP G -> A AC=1;AN=192;BQB=0.259749;DP=4687;DP4=2269,2047,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.4021e-12;MQSB=0.999514;RPB=0.439078;SGB=82.5522;VDB=0.0898014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A130T|432|LOC_Os11g19930|protein_coding|CODING|LOC_Os11g19930.1|4|1) FN1036-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN1036-S Single Base Substitution G-A INTERGENIC HET SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1196-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN1196-S Single Base Substitution G-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1338-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1643-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN1643-S Single Base Substitution G-A INTERGENIC Homo SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1658-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN1658-S SNP G -> A AC=2;AN=188;BQB=8.39332e-05;DP=2082;DP4=930,1097,12,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000480307;MQB=0.000444428;MQSB=0.899323;RPB=0.354924;SGB=-203.962;VDB=0.572872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN2118-S SNP G -> A AC=2;AN=168;BQB=0.905983;DP=2680;DP4=1177,1422,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.84921e-13;MQSB=0.947016;RPB=0.995227;SGB=53.7853;VDB=0.797171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN2283 SNP G -> A AC=1;AN=192;BQB=0.723895;DP=4711;DP4=2356,2023,21,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.18282e-22;MQSB=0.670603;RPB=0.814508;SGB=150.275;VDB=0.610752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN2431 SNP G -> A AC=2;AN=200;BQB=0.924747;DP=4375;DP4=2167,1912,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.16024e-15;MQSB=0.566981;RPB=0.414421;SGB=30.3571;VDB=0.00358816;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN3449-S SNP G -> A AC=1;AN=184;BQB=0.996746;DP=3354;DP4=1853,1410,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.09364e-12;MQSB=0.995567;RPB=0.999414;SGB=80.3949;VDB=0.0524628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3723-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN3723-S SNP G -> A AC=2;AN=190;BQB=0.992836;DP=2976;DP4=1518,1326,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.54559e-14;MQSB=0.980377;RPB=0.720353;SGB=49.1985;VDB=0.497292;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN4040-S SNP G -> A AC=1;AN=168;BQB=0.930042;DP=3024;DP4=1571,1337,10,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.29945e-08;MQSB=0.838782;RPB=0.650465;SGB=47.7421;VDB=0.728304;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN692-S Single Base Substitution G-A INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN870-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN870-S Single Base Substitution G-A INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN921-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN921-S Single Base Substitution G-A INTERGENIC HET SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN959-S.SNP.11:11477660 chr11:011477660 0 W/11477660-11477660 FN959-S Single Base Substitution G-A INTERGENIC HET SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN4190-S.SNP.11:11478366 chr11:011478366 0 W/11478366-11478366 FN4190-S SNP C -> T AC=1;AN=170;BQB=0.696029;DP=2550;DP4=1187,1309,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000392157;MQB=5.90762e-07;MQSB=0.958771;RPB=0.535675;SGB=24.5502;VDB=0.342083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V466I|646|LOC_Os11g19950|protein_coding|CODING|LOC_Os11g19950.1|5|1) FN4190-S.SNP.11:11478367 chr11:011478367 0 W/11478367-11478367 FN4190-S SNP C -> T AC=1;AN=170;BQB=0.962938;DP=2556;DP4=1173,1324,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000391236;MQB=2.4889e-06;MQSB=0.990058;RPB=0.749887;SGB=34.5445;VDB=0.33691;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V465|646|LOC_Os11g19950|protein_coding|CODING|LOC_Os11g19950.1|5|1) FN545-S.SNP.11:11487792 chr11:011487792 0 W/11487792-11487792 FN545-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g19960 retrotransposon protein, putative, unclassified, expressed SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1163-S.SNP.11:11490094 chr11:011490094 0 W/11490094-11490094 FN1163-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g19960 retrotransposon protein, putative, unclassified, expressed SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1617-S.SNP.11:11492226 chr11:011492226 0 W/11492226-11492226 FN1617-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2318.SNP.11:11492922 chr11:011492922 0 W/11492922-11492922 FN2318 SNP G -> A AC=1;AN=192;BQB=0.9288;DP=4372;DP4=2136,1956,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=6.18437e-08;MQSB=0.377928;RPB=0.962997;SGB=103.983;VDB=0.309312;EFF=INTRON(MODIFIER||||1280|LOC_Os11g19960|protein_coding|CODING|LOC_Os11g19960.1|7|1) FN1660-S.SNP.11:11493372 chr11:011493372 0 W/11493372-11493372 FN1660-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1576-S.SNP.11:11499197 chr11:011499197 0 W/11499197-11499197 FN1576-S Single Base Substitution T-C INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2558-S.SNP.11:11499732 chr11:011499732 0 W/11499732-11499732 FN2558-S SNP G -> T AC=2;AN=198;BQB=0.93428;DP=4458;DP4=2250,1891,38,19;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00157021;MQB=3.54971e-15;MQSB=0.223323;RPB=0.751536;SGB=71.5591;VDB=0.683941;EFF=INTERGENIC(MODIFIER||||||||||1) FN319-S.SNP.11:11500174 chr11:011500174 0 W/11500174-11500174 FN319-S Single Base Substitution C-T INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN-284.SNP.11:11500907 chr11:011500907 0 W/11500907-11500907 FN-284 Single Base Substitution C-T INTERGENIC HOMO SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN406-S.SNP.11:11506565 chr11:011506565 0 W/11506565-11506565 FN406-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN-285.SNP.11:11507591 chr11:011507591 0 W/11507591-11507591 FN-285 Single Base Substitution C-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1121-S.SNP.11:11515246 chr11:011515246 0 W/11515246-11515246 FN1121-S Single Base Substitution A-G INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.11:11515247 chr11:011515247 0 W/11515247-11515247 FN1121-S Single Base Substitution G-T INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN876-S.SNP.11:11516175 chr11:011516175 0 W/11516175-11516175 FN876-S Single Base Substitution G-T INTERGENIC HOMO SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3500-S.SNP.11:11518113 chr11:011518113 0 W/11518113-11518113 FN3500-S SNP C -> G AC=1;AN=188;BQB=0.996022;DP=2885;DP4=1092,1708,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.19264e-10;MQSB=0.983623;RPB=0.109151;SGB=28.6195;VDB=0.294356;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.11:11519771 chr11:011519771 0 W/11519771-11519771 FN3839-S SNP C -> A AC=1;AN=190;BQB=0.960499;DP=2601;DP4=1253,1286,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68093e-06;MQSB=0.981531;RPB=0.378162;SGB=35.4339;VDB=0.256052;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L14|112|LOC_Os11g20020|protein_coding|CODING|LOC_Os11g20020.1|1|1) FN2199-S.SNP.11:11524335 chr11:011524335 0 W/11524335-11524335 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.576796;DP=4862;DP4=2411,2198,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00555327;MQB=0.179754;MQSB=0.00924974;RPB=0.285278;SGB=8.77275;VDB=0.512849;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.11:11535853 chr11:011535853 0 W/11535853-11535853 FN-123 Single Base Substitution T-A INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3389-S.SNP.11:11538789 chr11:011538789 0 W/11538789-11538789 FN3389-S SNP T -> C AC=1;AN=184;BQB=0.717373;DP=2702;DP4=1365,1173,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000689705;MQSB=0.987321;RPB=0.969021;SGB=8.14452;VDB=0.805081;EFF=INTRON(MODIFIER||||368|LOC_Os11g20040|protein_coding|CODING|LOC_Os11g20040.1|1|1) FN3388-S.SNP.11:11543460 chr11:011543460 0 W/11543460-11543460 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.928165;DP=2658;DP4=1298,1247,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2305e-05;MQSB=0.888688;RPB=0.788749;SGB=10.6662;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.11:11553213 chr11:011553213 0 W/11553213-11553213 FN772-S Single Base Substitution G-C INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2491.SNP.11:11557314 chr11:011557314 0 W/11557314-11557314 FN2491 SNP G -> A AC=1;AN=200;BQB=0.976977;DP=3973;DP4=1985,1776,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.28066e-09;MQSB=0.997793;RPB=0.0040445;SGB=43.8747;VDB=0.0643744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P40L|165|LOC_Os11g20060|protein_coding|CODING|LOC_Os11g20060.1|1|1) FN-127.SNP.11:11564495 chr11:011564495 0 W/11564495-11564495 FN-127 Single Base Substitution T-A INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN525-S.SNP.11:11566919 chr11:011566919 0 W/11566919-11566919 FN525-S Single Base Substitution C-A INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3825-S.SNP.11:11568447 chr11:011568447 0 W/11568447-11568447 FN3825-S SNP C -> T AC=2;AN=190;BQB=0.568827;DP=2954;DP4=1410,1358,17,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000338524;MQB=1.35375e-11;MQSB=0.737187;RPB=0.665431;SGB=140.173;VDB=0.525316;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.11:11568447 chr11:011568447 0 W/11568447-11568447 FN4258-S SNP C -> T AC=2;AN=170;BQB=0.511485;DP=2309;DP4=1136,1037,14,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=2.486e-08;MQSB=0.219432;RPB=0.910278;SGB=92.2986;VDB=0.857845;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.11:11568447 chr11:011568447 0 W/11568447-11568447 FN773-S Single Base Substitution C-T INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. W481-5-1.SNP.11:11568447 chr11:011568447 0 W/11568447-11568447 W481-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN580-S.SNP.11:11572842 chr11:011572842 0 W/11572842-11572842 FN580-S Single Base Substitution C-A INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN4043-S.SNP.11:11573591 chr11:011573591 0 W/11573591-11573591 FN4043-S SNP G -> A AC=1;AN=168;BQB=0.933139;DP=2399;DP4=1171,1140,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.3295e-07;MQSB=0.086146;RPB=0.785298;SGB=55.3328;VDB=0.796159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.11:11574294 chr11:011574294 0 W/11574294-11574294 FN2167-S SNP A -> T AC=1;AN=168;BQB=0.854866;DP=1982;DP4=861,1038,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.14056e-07;MQSB=0.8979;RPB=0.955879;SGB=22.1847;VDB=0.539004;EFF=INTERGENIC(MODIFIER||||||||||1) FN-202.SNP.11:11586236 chr11:011586236 0 W/11586236-11586236 FN-202 Single Base Substitution T-C INTRON HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN983-S.SNP.11:11607269 chr11:011607269 0 W/11607269-11607269 FN983-S Single Base Substitution G-T INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3992-S.SNP.11:11609269 chr11:011609269 0 W/11609269-11609269 FN3992-S SNP T -> A AC=1;AN=168;BQB=0.983229;DP=2683;DP4=1306,1240,14,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.74156e-11;MQSB=0.926718;RPB=0.860594;SGB=34.3388;VDB=0.0454207;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.11:11613509 chr11:011613509 0 W/11613509-11613509 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.952457;DP=3099;DP4=1414,1576,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.22592e-07;MQSB=0.99208;RPB=0.885427;SGB=25.439;VDB=0.256733;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.11:11616175 chr11:011616175 0 W/11616175-11616175 FN521-S Single Base Substitution C-T INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3887-S.SNP.11:11628440 chr11:011628440 0 W/11628440-11628440 FN3887-S SNP T -> C AC=1;AN=158;BQB=0.928864;DP=2584;DP4=1044,1330,10,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.40986e-13;MQSB=0.923839;RPB=0.850841;SGB=67.7679;VDB=0.337925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1322-S.SNP.11:11632792 chr11:011632792 0 W/11632792-11632792 FN1322-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN3398-S.SNP.11:11640786 chr11:011640786 0 W/11640786-11640786 FN3398-S SNP T -> C AC=1;AN=184;BQB=0.920416;DP=2867;DP4=1441,1324,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0491803;MQB=0.725525;MQSB=3.44323e-19;RPB=0.070198;SGB=39.699;VDB=0.0284488;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E898|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|7|1) FN4154-S.SNP.11:11641416 chr11:011641416 0 W/11641416-11641416 FN4154-S SNP C -> T AC=1;AN=170;BQB=0.954814;DP=2451;DP4=1226,1164,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000407997;MQB=1.28054e-05;MQSB=0.937469;RPB=0.681921;SGB=38.987;VDB=0.769035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A790T|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1) W577-3-1.SNP.11:11641437 chr11:011641437 0 W/11641437-11641437 W577-3-1 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2222-S.SNP.11:11641945 chr11:011641945 0 W/11641945-11641945 FN2222-S SNP C -> A AC=1;AN=190;BQB=0.913938;DP=4809;DP4=2402,2109,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.31055e-05;MQSB=0.865484;RPB=0.691959;SGB=67.3108;VDB=0.959025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q613H|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1) FN-170.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN-170 Single Base Substitution G-A STOP_GAINED HET LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-63.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN-63 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN1368-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN1368-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3501-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN3501-S SNP G -> A AC=1;AN=188;BQB=0.902106;DP=3232;DP4=1651,1531,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000618812;MQB=0.000504624;MQSB=0.971628;RPB=0.216714;SGB=18.2682;VDB=0.0840715;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN354-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN354-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3669-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN3669-S SNP G -> A AC=1;AN=190;BQB=0.973301;DP=3132;DP4=1492,1550,4,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00063857;MQB=0.000562549;MQSB=0.999991;RPB=0.857855;SGB=21.7749;VDB=0.329692;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN3762-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN3762-S SNP G -> A AC=2;AN=190;BQB=0.0725742;DP=3174;DP4=1559,1507,17,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.17405e-13;MQSB=0.896346;RPB=0.987483;SGB=128.501;VDB=0.194187;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN3915-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN3915-S SNP G -> A AC=1;AN=158;BQB=0.795305;DP=2848;DP4=1390,1359,10,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000702247;MQB=1.38794e-10;MQSB=0.858418;RPB=0.351422;SGB=67.7679;VDB=0.581914;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN4031-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN4031-S SNP G -> A AC=1;AN=168;BQB=0.997411;DP=3033;DP4=1490,1453,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.82251e-08;MQSB=0.848736;RPB=0.434757;SGB=69.8961;VDB=0.23291;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN4129-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.577775;DP=3424;DP4=1760,1583,11,15;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.24753e-12;MQSB=0.986616;RPB=0.96551;SGB=111.774;VDB=0.830356;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q489*|1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|5|1);LOF=(LOC_Os11g20150|LOC_Os11g20150|1|1.00);NMD=(LOC_Os11g20150|LOC_Os11g20150|1|1.00) FN925-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN925-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN969-S.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 FN969-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. W466-5-1.SNP.11:11642319 chr11:011642319 0 W/11642319-11642319 W466-5-1 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g20150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2275-S.SNP.11:11644498 chr11:011644498 0 W/11644498-11644498 FN2275-S SNP T -> A AC=1;AN=190;BQB=0.798831;DP=4711;DP4=2291,1775,29,18;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00148588;MQB=4.92027e-05;MQSB=0.000127933;RPB=0.757051;SGB=105.384;VDB=0.79472;EFF=INTRON(MODIFIER||||1506|LOC_Os11g20150|protein_coding|CODING|LOC_Os11g20150.1|2|1) FN4156-S.SNP.11:11652950 chr11:011652950 0 W/11652950-11652950 FN4156-S SNP G -> T AC=2;AN=170;BQB=0.906466;DP=2420;DP4=1171,1164,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.12629e-13;MQSB=0.997658;RPB=0.547401;SGB=114.512;VDB=0.819541;EFF=INTERGENIC(MODIFIER||||||||||1) FN591-S.SNP.11:11658787 chr11:011658787 0 W/11658787-11658787 FN591-S Single Base Substitution G-A INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN3692-S.SNP.11:11664061 chr11:011664061 0 W/11664061-11664061 FN3692-S SNP C -> G AC=1;AN=190;BQB=0.76948;DP=2715;DP4=1348,1282,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.10274e-05;MQSB=0.417217;RPB=0.0238854;SGB=8.33661;VDB=0.505655;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.11:11664687 chr11:011664687 0 W/11664687-11664687 FN1254-S Single Base Substitution T-C INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN1061-S.SNP.11:11668510 chr11:011668510 0 W/11668510-11668510 FN1061-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3287-S.SNP.11:11677785 chr11:011677785 0 W/11677785-11677785 FN3287-S SNP G -> A AC=1;AN=184;BQB=0.70778;DP=3067;DP4=1428,1547,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.89658e-08;MQSB=0.97401;RPB=0.639888;SGB=75.8731;VDB=0.904899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C371Y|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|1|1) FN3834-S.SNP.11:11678473 chr11:011678473 0 W/11678473-11678473 FN3834-S SNP C -> T AC=2;AN=190;BQB=0.59706;DP=3246;DP4=1625,1529,9,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.54886e-12;MQSB=0.554004;RPB=0.960369;SGB=75.1932;VDB=0.132099;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I543|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|2|1) FN1227-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN1227-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1277-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN1277-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2297.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN2297 SNP G -> C AC=2;AN=192;BQB=0.953896;DP=4510;DP4=2319,1924,25,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.8152e-23;MQSB=0.695641;RPB=0.471966;SGB=98.1513;VDB=0.322815;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R889T|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|3|1) FN3422-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN3422-S SNP G -> C AC=2;AN=184;BQB=0.993489;DP=2442;DP4=1107,1243,13,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.00739e-12;MQSB=0.994521;RPB=0.693632;SGB=89.4385;VDB=0.088356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R889T|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|3|1) FN3658-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN3658-S SNP G -> C AC=1;AN=190;BQB=0.455781;DP=2206;DP4=1022,1099,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27366e-05;MQSB=0.999948;RPB=0.592133;SGB=-0.550503;VDB=0.516659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R889T|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|3|1) FN3760-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN3760-S SNP G -> C AC=2;AN=190;BQB=0.896236;DP=2233;DP4=1023,1119,7,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.67697e-11;MQSB=0.916628;RPB=0.996584;SGB=57.4238;VDB=0.979116;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R889T|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|3|1) FN3848-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN3848-S SNP G -> C AC=1;AN=158;BQB=0.957771;DP=2042;DP4=943,1013,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.54398e-09;MQSB=0.96145;RPB=0.999989;SGB=55.806;VDB=0.76967;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R889T|938|LOC_Os11g20220|protein_coding|CODING|LOC_Os11g20220.1|3|1) FN678-S.SNP.11:11679980 chr11:011679980 0 W/11679980-11679980 FN678-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3478-S.SNP.11:11681298 chr11:011681298 0 W/11681298-11681298 FN3478-S SNP C -> T AC=2;AN=184;BQB=0.599551;DP=3633;DP4=1780,1716,17,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.09909e-18;MQSB=0.445503;RPB=0.135492;SGB=130.836;VDB=0.568179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.11:11682452 chr11:011682452 0 W/11682452-11682452 FN3846-S SNP G -> A AC=1;AN=190;BQB=0.902125;DP=2999;DP4=1265,1650,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04535e-07;MQSB=0.738582;RPB=0.730753;SGB=49.0954;VDB=0.809805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.11:11687430 chr11:011687430 0 W/11687430-11687430 FN2436 SNP A -> T AC=2;AN=200;BQB=0.998189;DP=4588;DP4=2288,2006,26,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.97097e-26;MQSB=0.547928;RPB=0.789841;SGB=155.635;VDB=0.171776;EFF=INTRON(MODIFIER||||521|LOC_Os11g20239|protein_coding|CODING|LOC_Os11g20239.1|3|1) FN1461-S.SNP.11:11688550 chr11:011688550 0 W/11688550-11688550 FN1461-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 1229, Mutant_ID: FN1461-S, Generation: M2, Mutations: 63, Genes: 15, Seed availability: Yes. FN1716-S.SNP.11:11689475 chr11:011689475 0 W/11689475-11689475 FN1716-S SNP T -> C AC=1;AN=188;BQB=0.619235;DP=2388;DP4=357,2008,1,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.35645e-07;MQSB=0.567918;RPB=0.956367;SGB=-35.081;VDB=0.560746;EFF=INTRON(MODIFIER||||521|LOC_Os11g20239|protein_coding|CODING|LOC_Os11g20239.1|1|1) FN1203-S.SNP.11:11693538 chr11:011693538 0 W/11693538-11693538 FN1203-S Single Base Substitution C-T INTRON HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN3449-S.SNP.11:11696800 chr11:011696800 0 W/11696800-11696800 FN3449-S SNP A -> C AC=1;AN=184;BQB=0.997633;DP=1953;DP4=663,1241,2,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.24421e-06;MQSB=0.998716;RPB=0.928383;SGB=39.699;VDB=0.693683;EFF=INTRON(MODIFIER||||521|LOC_Os11g20239|protein_coding|CODING|LOC_Os11g20239.1|1|1) FN678-S.SNP.11:11698004 chr11:011698004 0 W/11698004-11698004 FN678-S Single Base Substitution G-A INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN1529-S.SNP.11:11700557 chr11:011700557 0 W/11700557-11700557 FN1529-S Single Base Substitution T-C INTRON HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN4121-S.SNP.11:11700655 chr11:011700655 0 W/11700655-11700655 FN4121-S SNP T -> A AC=2;AN=182;BQB=0.978075;DP=3082;DP4=1537,1473,7,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.81469e-08;MQSB=0.999168;RPB=0.873149;SGB=62.1548;VDB=0.61371;EFF=INTRON(MODIFIER||||521|LOC_Os11g20239|protein_coding|CODING|LOC_Os11g20239.1|1|1) FN2338.SNP.11:11707196 chr11:011707196 0 W/11707196-11707196 FN2338 SNP G -> T AC=1;AN=192;BQB=0.998505;DP=4829;DP4=2239,2317,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.72866e-14;MQSB=0.995448;RPB=0.999517;SGB=54.5574;VDB=0.219841;EFF=INTRON(MODIFIER||||413|LOC_Os11g20260|protein_coding|CODING|LOC_Os11g20260.1|1|1) FN1376-S.SNP.11:11713026 chr11:011713026 0 W/11713026-11713026 FN1376-S Single Base Substitution A-G INTERGENIC HET SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN2742-S.SNP.11:11719665 chr11:011719665 0 W/11719665-11719665 FN2742-S SNP G -> A AC=1;AN=200;BQB=0.793045;DP=5006;DP4=2422,2329,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46563e-12;MQSB=0.987931;RPB=0.656047;SGB=72.7161;VDB=0.73783;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.11:11722166 chr11:011722166 0 W/11722166-11722166 FN4120-S SNP G -> A AC=1;AN=182;BQB=0.783834;DP=2420;DP4=1409,942,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=20;MQ0F=0.319421;MQB=0.0891495;MQSB=0;RPB=0.0303581;SGB=28.6061;VDB=0.218041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.11:11724839 chr11:011724839 0 W/11724839-11724839 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.510516;DP=3839;DP4=1816,1812,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=26;MQ0F=0.0646002;MQB=0.932386;MQSB=1.0434e-19;RPB=0.92838;SGB=77.1196;VDB=0.956114;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P542|1914|LOC_Os11g20290|protein_coding|CODING|LOC_Os11g20290.1|1|1) FN3553-S.SNP.11:11729881 chr11:011729881 0 W/11729881-11729881 FN3553-S SNP G -> A AC=1;AN=188;BQB=0.990255;DP=4507;DP4=2344,2080,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=19;MQ0F=0.323053;MQB=0.360022;MQSB=1.00937e-31;RPB=0.702842;SGB=67.8739;VDB=0.416905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A944V|1008|LOC_Os11g20300|protein_coding|CODING|LOC_Os11g20300.1|3|1) FN421-S.SNP.11:11736370 chr11:011736370 0 W/11736370-11736370 FN421-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN3466-S.SNP.11:11742236 chr11:011742236 0 W/11742236-11742236 FN3466-S SNP A -> G AC=1;AN=184;BQB=0.964893;DP=3355;DP4=1417,1803,12,17;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00417288;MQB=1.6292e-14;MQSB=0.135282;RPB=0.91243;SGB=92.0965;VDB=0.176298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2316.SNP.11:11742932 chr11:011742932 0 W/11742932-11742932 FN2316 SNP G -> C AC=1;AN=192;BQB=0.895177;DP=4851;DP4=2240,2355,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206143;MQB=3.26119e-15;MQSB=0.188404;RPB=0.915864;SGB=54.5574;VDB=0.121307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.11:11750731 chr11:011750731 0 W/11750731-11750731 FN2444 SNP A -> G AC=1;AN=200;BQB=0.998961;DP=4652;DP4=2049,2309,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000214961;MQB=8.89968e-08;MQSB=0.884204;RPB=0.648815;SGB=21.6694;VDB=0.437172;EFF=INTRON(MODIFIER||||134|LOC_Os11g20330|protein_coding|CODING|LOC_Os11g20330.1|2|1),INTRON(MODIFIER||||134|LOC_Os11g20330|protein_coding|CODING|LOC_Os11g20330.2|2|1) FN3548-S.SNP.11:11754731 chr11:011754731 0 W/11754731-11754731 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.903192;DP=2888;DP4=1269,1565,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97797e-06;MQSB=0.962186;RPB=0.829876;SGB=35.3493;VDB=0.999915;EFF=INTRON(MODIFIER||||134|LOC_Os11g20330|protein_coding|CODING|LOC_Os11g20330.1|1|1),INTRON(MODIFIER||||134|LOC_Os11g20330|protein_coding|CODING|LOC_Os11g20330.2|1|1) 822-5-5.SNP.11:11761931 chr11:011761931 0 W/11761931-11761931 822-5-5 Single Base Substitution T-A INTERGENIC HET SNo: 1493, Mutant_ID: 822-5-5, Generation: M2, Mutations: 21, Genes: 100, Seed availability: Yes. 822-5-6.SNP.11:11761931 chr11:011761931 0 W/11761931-11761931 822-5-6 Single Base Substitution T-A INTERGENIC Homo SNo: 1494, Mutant_ID: 822-5-6, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN_822-5-1.SNP.11:11761931 chr11:011761931 0 W/11761931-11761931 FN_822-5-1 Single Base Substitution T-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2465.SNP.11:11764416 chr11:011764416 0 W/11764416-11764416 FN2465 SNP C -> T AC=1;AN=200;BQB=0.955627;DP=3374;DP4=2262,921,14,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000296384;MQB=2.29182e-10;MQSB=0.994557;RPB=0.827936;SGB=81.8956;VDB=0.374321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.11:11766399 chr11:011766399 0 W/11766399-11766399 FN1014-S Single Base Substitution C-T INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2611-S.SNP.11:11769158 chr11:011769158 0 W/11769158-11769158 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.942362;DP=4814;DP4=2363,2239,24,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.25236e-26;MQSB=0.999964;RPB=0.991165;SGB=155.635;VDB=0.86095;EFF=INTERGENIC(MODIFIER||||||||||1) FN-216.SNP.11:11770792 chr11:011770792 0 W/11770792-11770792 FN-216 Single Base Substitution T-G INTERGENIC HET SNo: 215, Mutant_ID: FN-216, Generation: M2, Mutations: 64, Genes: 65, Seed availability: Yes. FN2116-S.SNP.11:11783719 chr11:011783719 0 W/11783719-11783719 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.981156;DP=3573;DP4=1904,1607,15,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57473e-15;MQSB=0.846986;RPB=0.854189;SGB=-8.47945;VDB=0.743209;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.11:11783793 chr11:011783793 0 W/11783793-11783793 FN-236 Single Base Substitution G-A INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN927-S.SNP.11:11786701 chr11:011786701 0 W/11786701-11786701 FN927-S Single Base Substitution A-C INTRON HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1730-S.SNP.11:11788190 chr11:011788190 0 W/11788190-11788190 FN1730-S SNP T -> C AC=1;AN=188;BQB=0.908756;DP=4154;DP4=2007,2106,15,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.59988e-15;MQSB=0.998467;RPB=0.999094;SGB=89.1337;VDB=0.423921;EFF=INTRON(MODIFIER||||597|LOC_Os11g20384|protein_coding|CODING|LOC_Os11g20384.1|15|1) FN4221-S.SNP.11:11789392 chr11:011789392 0 W/11789392-11789392 FN4221-S SNP A -> T AC=1;AN=170;BQB=0.799925;DP=2940;DP4=1414,1470,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000142314;MQSB=0.95456;RPB=0.060349;SGB=24.5502;VDB=0.369485;EFF=INTRON(MODIFIER||||597|LOC_Os11g20384|protein_coding|CODING|LOC_Os11g20384.1|13|1) FN-53.SNP.11:11791891 chr11:011791891 0 W/11791891-11791891 FN-53 Single Base Substitution G-T INTRON HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN266-S.SNP.11:11795251 chr11:011795251 0 W/11795251-11795251 FN266-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN514-S.SNP.11:11797695 chr11:011797695 0 W/11797695-11797695 FN514-S Single Base Substitution A-C INTRON HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3979-S.SNP.11:11802798 chr11:011802798 0 W/11802798-11802798 FN3979-S SNP C -> T AC=1;AN=168;BQB=0.910187;DP=2169;DP4=1041,1021,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.7846e-05;MQSB=0.872956;RPB=0.886301;SGB=30.0193;VDB=0.342481;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.11:11811713 chr11:011811713 0 W/11811713-11811713 FN1277-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g20400 retrotransposon protein, putative, unclassified, expressed SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN3050-S.SNP.11:11828450 chr11:011828450 0 W/11828450-11828450 FN3050-S SNP G -> A AC=1;AN=184;BQB=0.313175;DP=2938;DP4=1463,1349,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000340368;MQB=4.66116e-07;MQSB=0.510103;RPB=0.419299;SGB=35.7479;VDB=0.728119;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K3|308|LOC_Os11g20440|protein_coding|CODING|LOC_Os11g20440.1|1|1) FN3851-S.SNP.11:11831256 chr11:011831256 0 W/11831256-11831256 FN3851-S SNP C -> G AC=1;AN=158;BQB=0.969487;DP=2320;DP4=871,1318,6,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.84618e-05;MQSB=0.051512;RPB=0.970559;SGB=21.4493;VDB=0.224483;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D248E|308|LOC_Os11g20440|protein_coding|CODING|LOC_Os11g20440.1|3|1) FN_N1-130-1.SNP.11:11831717 chr11:011831717 0 W/11831717-11831717 FN_N1-130-1 Single Base Substitution C-G HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3910-S.SNP.11:11833309 chr11:011833309 0 W/11833309-11833309 FN3910-S SNP C -> T AC=1;AN=158;BQB=0.851393;DP=2073;DP4=893,1052,1,9;HOB=8.01154e-05;ICB=0.000161245;MQ=19;MQ0F=0.345876;MQB=0.0301699;MQSB=1.94501e-08;RPB=0.994143;SGB=38.3284;VDB=0.71461;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.11:11833504 chr11:011833504 0 W/11833504-11833504 FN3460-S SNP C -> G AC=1;AN=184;BQB=0.8335;DP=3662;DP4=1435,2104,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0931185;MQB=0.170014;MQSB=0.000859056;RPB=0.907338;SGB=98.4821;VDB=0.0134365;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.11:11837190 chr11:011837190 0 W/11837190-11837190 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.906679;DP=4607;DP4=2979,1330,18,13;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.12112;MQB=0.360196;MQSB=4.76649e-32;RPB=1;SGB=101.557;VDB=0.147336;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P502|1651|LOC_Os11g20450|protein_coding|CODING|LOC_Os11g20450.1|4|1) FN4009-S.SNP.11:11839605 chr11:011839605 0 W/11839605-11839605 FN4009-S SNP T -> C AC=1;AN=168;BQB=0.999529;DP=4098;DP4=1713,2230,4,7;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.211079;MQB=0.174193;MQSB=2.8026e-45;RPB=0.907271;SGB=43.3113;VDB=0.954548;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V1152|1651|LOC_Os11g20450|protein_coding|CODING|LOC_Os11g20450.1|5|1) FN721-S.SNP.11:11850067 chr11:011850067 0 W/11850067-11850067 FN721-S Single Base Substitution C-T INTERGENIC HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN1508-S.SNP.11:11856917 chr11:011856917 0 W/11856917-11856917 FN1508-S Single Base Substitution C-T STOP_GAINED HET LOC_Os11g20470 retrotransposon protein, putative, unclassified, expressed SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1213-S.SNP.11:11863560 chr11:011863560 0 W/11863560-11863560 FN1213-S Single Base Substitution T-G INTRON HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2242-S.SNP.11:11868395 chr11:011868395 0 W/11868395-11868395 FN2242-S SNP C -> T AC=1;AN=190;BQB=0.97014;DP=4414;DP4=2301,1805,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.81053e-08;MQSB=0.514892;RPB=0.661031;SGB=71.8647;VDB=0.255568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.11:11870139 chr11:011870139 0 W/11870139-11870139 FN2295 SNP T -> G AC=1;AN=192;BQB=0.828217;DP=2886;DP4=2201,407,13,1;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.99676e-08;MQSB=0.96866;RPB=0.993625;SGB=58.3392;VDB=0.988387;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.11:11871467 chr11:011871467 0 W/11871467-11871467 FN1399-S Single Base Substitution T-G INTRON HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1067-S.SNP.11:11871483 chr11:011871483 0 W/11871483-11871483 FN1067-S Single Base Substitution C-A INTRON HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1399-S.SNP.11:11879186 chr11:011879186 0 W/11879186-11879186 FN1399-S Single Base Substitution A-C INTERGENIC HET SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN747-S.SNP.11:11893442 chr11:011893442 0 W/11893442-11893442 FN747-S Single Base Substitution G-A INTRON HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3434-S.SNP.11:11896344 chr11:011896344 0 W/11896344-11896344 FN3434-S SNP G -> A AC=1;AN=184;BQB=0.997795;DP=2936;DP4=1785,1049,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52589e-11;MQSB=0.967701;RPB=0.756096;SGB=84.9167;VDB=0.561811;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.11:11897151 chr11:011897151 0 W/11897151-11897151 FN1099-S Single Base Substitution G-A INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN479-S.SNP.11:11905535 chr11:011905535 0 W/11905535-11905535 FN479-S Single Base Substitution C-T INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. W443-5-1-3.SNP.11:11912077 chr11:011912077 0 W/11912077-11912077 W443-5-1-3 Single Base Substitution A-G INTRON HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN508-S.SNP.11:11912521 chr11:011912521 0 W/11912521-11912521 FN508-S Single Base Substitution A-T INTRON HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN-204.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN-204 Single Base Substitution T-G INTRON HOMO SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-410.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN-410 Single Base Substitution T-G INTRON HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2596-S.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN2596-S SNP T -> G AC=2;AN=198;BQB=0.269516;DP=4063;DP4=1752,1824,22,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.79702e-21;MQSB=0.33037;RPB=0.548169;SGB=50.8225;VDB=0.43527;EFF=INTRON(MODIFIER||||708|LOC_Os11g20554|protein_coding|CODING|LOC_Os11g20554.1|10|1) FN3578-S.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN3578-S SNP T -> G AC=2;AN=188;BQB=0.955578;DP=2842;DP4=1421,1225,29,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.25227e-24;MQSB=0.926194;RPB=0.986089;SGB=160.605;VDB=0.132153;EFF=INTRON(MODIFIER||||708|LOC_Os11g20554|protein_coding|CODING|LOC_Os11g20554.1|10|1) FN3772-S.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN3772-S SNP T -> G AC=2;AN=190;BQB=0.773923;DP=2951;DP4=1405,1369,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.19869e-11;MQSB=0.85219;RPB=0.116393;SGB=57.4238;VDB=0.390866;EFF=INTRON(MODIFIER||||708|LOC_Os11g20554|protein_coding|CODING|LOC_Os11g20554.1|10|1) FN410-S.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN410-S Single Base Substitution T-G INTRON HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN439-S.SNP.11:11917951 chr11:011917951 0 W/11917951-11917951 FN439-S Single Base Substitution T-G INTRON HOMO SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1300-S.SNP.11:11919711 chr11:011919711 0 W/11919711-11919711 FN1300-S Single Base Substitution A-C INTRON HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2545-S.SNP.11:11924804 chr11:011924804 0 W/11924804-11924804 FN2545-S SNP C -> G AC=2;AN=198;BQB=0.916249;DP=4125;DP4=1953,1903,15,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.42122e-19;MQSB=0.643366;RPB=0.965958;SGB=73.4614;VDB=0.364451;EFF=UTR_3_PRIME(MODIFIER||312||708|LOC_Os11g20554|protein_coding|CODING|LOC_Os11g20554.1|16|1) FN2664-S.SNP.11:11929098 chr11:011929098 0 W/11929098-11929098 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.528538;DP=4997;DP4=2277,2439,18,18;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0456274;MQB=0.014716;MQSB=0.00774251;RPB=0.966275;SGB=78.9831;VDB=0.54858;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I550V|770|LOC_Os11g20570|protein_coding|CODING|LOC_Os11g20570.1|3|1) FN2285.SNP.11:11930706 chr11:011930706 0 W/11930706-11930706 FN2285 SNP G -> A AC=1;AN=192;BQB=0.999098;DP=4507;DP4=2371,1783,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0213002;MQB=5.98288e-06;MQSB=2.29464e-06;RPB=0.996977;SGB=1.09742;VDB=0.840736;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R158C|770|LOC_Os11g20570|protein_coding|CODING|LOC_Os11g20570.1|1|1) FN1118-S.SNP.11:11931771 chr11:011931771 0 W/11931771-11931771 FN1118-S Single Base Substitution C-T INTERGENIC HOMO SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2468.SNP.11:11933203 chr11:011933203 0 W/11933203-11933203 FN2468 SNP T -> A AC=1;AN=200;BQB=0.962392;DP=3850;DP4=2223,1458,9,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00311688;MQB=2.1497e-05;MQSB=0;RPB=0.502733;SGB=63.4749;VDB=0.239048;EFF=INTRON(MODIFIER||||93|LOC_Os11g20580|protein_coding|CODING|LOC_Os11g20580.1|2|1) FN1367-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN1367-S Single Base Substitution C-A INTERGENIC Homo SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1537-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN1537-S Single Base Substitution C-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2182-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN2182-S SNP C -> A AC=2;AN=190;BQB=0.993195;DP=4235;DP4=2007,1770,28,20;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00472255;MQB=2.78217e-05;MQSB=7.98471e-06;RPB=0.771709;SGB=55.389;VDB=0.167576;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN2538-S SNP C -> A AC=2;AN=198;BQB=0.991904;DP=3645;DP4=1663,1639,29,21;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0.00631001;MQB=0.0001421;MQSB=0.164678;RPB=0.995591;SGB=100.419;VDB=0.508293;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN3442-S SNP C -> A AC=2;AN=184;BQB=0.51741;DP=2072;DP4=1066,896,5,11;HOB=0.0215028;ICB=0.494625;MQ=44;MQ0F=0.019305;MQB=0.0649619;MQSB=0.891538;RPB=0.788872;SGB=46.3132;VDB=0.331828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN3547-S SNP C -> A AC=2;AN=188;BQB=0.99966;DP=2039;DP4=1030,919,11,9;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0.0171653;MQB=0.00542189;MQSB=0.906771;RPB=0.931774;SGB=60.7873;VDB=0.839901;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.11:11933705 chr11:011933705 0 W/11933705-11933705 FN448-S Single Base Substitution C-A INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1097-S.SNP.11:11935216 chr11:011935216 0 W/11935216-11935216 FN1097-S Single Base Substitution T-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN4001-S.SNP.11:11940188 chr11:011940188 0 W/11940188-11940188 FN4001-S SNP G -> T AC=1;AN=168;BQB=0.967529;DP=2735;DP4=1438,1186,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.196447;MQSB=0.0416431;RPB=0.868196;SGB=34.4498;VDB=0.310568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.11:11942884 chr11:011942884 0 W/11942884-11942884 FN3491-S SNP G -> A AC=2;AN=188;BQB=0.97896;DP=3025;DP4=1761,1147,10,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62391e-11;MQSB=0.589415;RPB=0.51375;SGB=85.3253;VDB=0.214687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2335.SNP.11:11948488 chr11:011948488 0 W/11948488-11948488 FN2335 SNP C -> G AC=1;AN=192;BQB=0.999989;DP=4644;DP4=2195,2185,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14571e-15;MQSB=0.71245;RPB=0.696928;SGB=140.497;VDB=0.578754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R807P|1261|LOC_Os11g20610|protein_coding|CODING|LOC_Os11g20610.1|4|1) FN2609-S.SNP.11:11950558 chr11:011950558 0 W/11950558-11950558 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.89045;DP=3779;DP4=1834,1686,14,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00026462;MQB=8.27297e-11;MQSB=0.625986;RPB=0.506835;SGB=79.6954;VDB=0.992836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A218T|1261|LOC_Os11g20610|protein_coding|CODING|LOC_Os11g20610.1|1|1) FN585-S.SNP.11:11953435 chr11:011953435 0 W/11953435-11953435 FN585-S Single Base Substitution C-A INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN868-S.SNP.11:11953912 chr11:011953912 0 W/11953912-11953912 FN868-S Single Base Substitution T-C INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2326.SNP.11:11956791 chr11:011956791 0 W/11956791-11956791 FN2326 SNP C -> G AC=1;AN=192;BQB=0.659051;DP=5162;DP4=2421,2358,17,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.32541e-14;MQSB=0.996394;RPB=0.237308;SGB=44.3;VDB=0.0175097;EFF=INTERGENIC(MODIFIER||||||||||1) FN460-S.SNP.11:11957729 chr11:011957729 0 W/11957729-11957729 FN460-S Single Base Substitution A-C INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN460-S.SNP.11:11957731 chr11:011957731 0 W/11957731-11957731 FN460-S Single Base Substitution A-C INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN-228.SNP.11:11962215 chr11:011962215 0 W/11962215-11962215 FN-228 Single Base Substitution T-A INTRON HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN_N1-220-1.SNP.11:11967620 chr11:011967620 0 W/11967620-11967620 FN_N1-220-1 Single Base Substitution T-C HET LOC_Os11g20640 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. W674-4-1.SNP.11:11968060 chr11:011968060 0 W/11968060-11968060 W674-4-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN3541-S.SNP.11:11970684 chr11:011970684 0 W/11970684-11970684 FN3541-S SNP A -> T AC=2;AN=188;BQB=0.900733;DP=2676;DP4=1267,1343,7,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.08625e-11;MQSB=0.913417;RPB=0.872088;SGB=53.7007;VDB=0.750627;EFF=INTERGENIC(MODIFIER||||||||||1) FN448-S.SNP.11:11970684 chr11:011970684 0 W/11970684-11970684 FN448-S Single Base Substitution A-T INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN-174.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN-174 Single Base Substitution C-T INTRON HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-399.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN-399 Single Base Substitution C-T INTRON HOMO SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN2460.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN2460 SNP C -> T AC=1;AN=200;BQB=0.966494;DP=4662;DP4=2265,2221,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.00281e-10;MQSB=0.972191;RPB=0.39718;SGB=81.8956;VDB=0.325585;EFF=INTRON(MODIFIER||||172|LOC_Os11g20660|protein_coding|CODING|LOC_Os11g20660.1|1|1) FN2671-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN2671-S SNP C -> T AC=2;AN=200;BQB=0.97768;DP=4933;DP4=2451,2262,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.63639e-20;MQSB=0.999318;RPB=0.869402;SGB=105.163;VDB=0.242712;EFF=INTRON(MODIFIER||||172|LOC_Os11g20660|protein_coding|CODING|LOC_Os11g20660.1|1|1) FN2782-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.739631;DP=4252;DP4=2084,2005,15,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.36774e-19;MQSB=0.994594;RPB=0.672797;SGB=155.237;VDB=0.795236;EFF=INTRON(MODIFIER||||172|LOC_Os11g20660|protein_coding|CODING|LOC_Os11g20660.1|1|1) FN3407-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.918114;DP=2962;DP4=1283,1613,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.41554e-05;MQSB=0.960402;RPB=0.777263;SGB=21.6609;VDB=0.272032;EFF=INTRON(MODIFIER||||172|LOC_Os11g20660|protein_coding|CODING|LOC_Os11g20660.1|1|1) FN399-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN399-S Single Base Substitution C-T INTRON HOMO SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN786-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN786-S Single Base Substitution C-T INTRON HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN930-S.SNP.11:11974037 chr11:011974037 0 W/11974037-11974037 FN930-S Single Base Substitution C-T INTRON HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2795-S.SNP.11:11979986 chr11:011979986 0 W/11979986-11979986 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.47066;DP=4174;DP4=2027,1931,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00287494;MQB=1.9105e-06;MQSB=0.573782;RPB=0.999968;SGB=25.7687;VDB=0.967056;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.11:12001334 chr11:012001334 0 W/12001334-12001334 FN2652-S SNP A -> G AC=1;AN=200;BQB=0.394715;DP=3993;DP4=1642,2102,7,13;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.401703;MQB=0.175926;MQSB=0;RPB=0.031704;SGB=37.3004;VDB=0.240982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T494A|603|LOC_Os11g20720|protein_coding|CODING|LOC_Os11g20720.1|2|1) FN367-S.SNP.11:12001411 chr11:012001411 0 W/12001411-12001411 FN367-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3924-S.SNP.11:12002375 chr11:012002375 0 W/12002375-12002375 FN3924-S SNP C -> T AC=1;AN=158;BQB=0.167122;DP=2926;DP4=1285,1519,4,16;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.82709e-06;MQSB=0.179202;RPB=0.52521;SGB=57.6596;VDB=0.810703;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L120|161|LOC_Os11g20730|protein_coding|CODING|LOC_Os11g20730.1|1|1) FN2188-S.SNP.11:12002639 chr11:012002639 0 W/12002639-12002639 FN2188-S SNP G -> A AC=1;AN=190;BQB=0.541384;DP=4878;DP4=2139,2322,17,26;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.23079e-24;MQSB=0.488572;RPB=0.97719;SGB=47.6197;VDB=0.368679;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F32|161|LOC_Os11g20730|protein_coding|CODING|LOC_Os11g20730.1|1|1) FN4044-S.SNP.11:12003577 chr11:012003577 0 W/12003577-12003577 FN4044-S SNP G -> A AC=1;AN=168;BQB=0.679221;DP=2472;DP4=1234,1151,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.6112e-06;MQSB=0.987376;RPB=0.129874;SGB=21.0249;VDB=0.344079;EFF=INTERGENIC(MODIFIER||||||||||1) FN2262-S.SNP.11:12007097 chr11:012007097 0 W/12007097-12007097 FN2262-S SNP T -> C AC=1;AN=190;BQB=0.897948;DP=4821;DP4=2484,1940,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207426;MQB=6.94123e-16;MQSB=0.709649;RPB=0.984875;SGB=103.624;VDB=0.911896;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N45|65|LOC_Os11g20740|protein_coding|CODING|LOC_Os11g20740.1|2|1) FN3294-S.SNP.11:12009850 chr11:012009850 0 W/12009850-12009850 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.653037;DP=2800;DP4=1265,1451,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00271719;MQSB=0.996827;RPB=0.952867;SGB=39.699;VDB=0.570414;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K148|222|LOC_Os11g20750|protein_coding|CODING|LOC_Os11g20750.1|2|1) FN3283-S.SNP.11:12010790 chr11:012010790 0 W/12010790-12010790 FN3283-S SNP C -> A AC=2;AN=184;BQB=0.599734;DP=3281;DP4=2022,1148,11,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.16827e-08;MQSB=0.982962;RPB=0.451228;SGB=84.9167;VDB=0.0814469;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E66*|222|LOC_Os11g20750|protein_coding|CODING|LOC_Os11g20750.1|1|1);LOF=(LOC_Os11g20750|LOC_Os11g20750|1|1.00);NMD=(LOC_Os11g20750|LOC_Os11g20750|1|1.00) FN2459.SNP.11:12013347 chr11:012013347 0 W/12013347-12013347 FN2459 SNP A -> C AC=2;AN=200;BQB=0.568956;DP=4746;DP4=2285,2142,21,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000210704;MQB=1.83125e-22;MQSB=0.984935;RPB=0.92827;SGB=141.214;VDB=0.162384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2187-S.SNP.11:12015318 chr11:012015318 0 W/12015318-12015318 FN2187-S SNP G -> A AC=1;AN=190;BQB=0.99678;DP=5117;DP4=2441,2333,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78006e-10;MQSB=0.188848;RPB=0.938749;SGB=76.4186;VDB=0.603062;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T997I|1556|LOC_Os11g20760|protein_coding|CODING|LOC_Os11g20760.1|5|1) FN524-S.SNP.11:12019987 chr11:012019987 0 W/12019987-12019987 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1551-S.SNP.11:12046509 chr11:012046509 0 W/12046509-12046509 FN1551-S Single Base Substitution A-C INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1550-S.SNP.11:12063977 chr11:012063977 0 W/12063977-12063977 FN1550-S Single Base Substitution C-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN4152-S.SNP.11:12064792 chr11:012064792 0 W/12064792-12064792 FN4152-S SNP G -> T AC=1;AN=170;BQB=0.656582;DP=2832;DP4=1315,1252,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00423729;MQB=0.00321821;MQSB=5.66924e-05;RPB=0.993541;SGB=34.878;VDB=0.760401;EFF=INTERGENIC(MODIFIER||||||||||1) FN3513-S.SNP.11:12076407 chr11:012076407 0 W/12076407-12076407 FN3513-S SNP C -> A AC=1;AN=188;BQB=0.898788;DP=2847;DP4=1346,1421,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.15285e-07;MQSB=0.803105;RPB=0.477414;SGB=44.4357;VDB=0.478779;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.11:12076587 chr11:012076587 0 W/12076587-12076587 FN571-S Single Base Substitution C-T INTERGENIC HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN1615-S.SNP.11:12078191 chr11:012078191 0 W/12078191-12078191 FN1615-S Single Base Substitution G-T INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN2495.SNP.11:12117564 chr11:012117564 0 W/12117564-12117564 FN2495 SNP G -> A AC=1;AN=200;BQB=0.619164;DP=8612;DP4=3839,4149,15,15;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=1.29232e-10;MQSB=7.73974e-33;RPB=0.540032;SGB=-5.84819;VDB=0.915589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1302-S.SNP.11:12117939 chr11:012117939 0 W/12117939-12117939 FN1302-S Single Base Substitution T-C INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3782-S.SNP.11:12142214 chr11:012142214 0 W/12142214-12142214 FN3782-S SNP C -> T AC=1;AN=190;BQB=0.668653;DP=2213;DP4=903,1230,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.75027e-06;MQSB=0.729328;RPB=0.446949;SGB=39.9877;VDB=0.460358;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.11:12148860 chr11:012148860 0 W/12148860-12148860 FN1222-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN1531-S.SNP.11:12185485 chr11:012185485 0 W/12185485-12185485 FN1531-S Single Base Substitution T-G INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN715-S.SNP.11:12195395 chr11:012195395 0 W/12195395-12195395 FN715-S Single Base Substitution A-G INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN1415-S.SNP.11:12280718 chr11:012280718 0 W/12280718-12280718 FN1415-S Single Base Substitution A-C INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN442-S.SNP.11:12289823 chr11:012289823 0 W/12289823-12289823 FN442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN3713-S.SNP.11:12290704 chr11:012290704 0 W/12290704-12290704 FN3713-S SNP G -> T AC=2;AN=190;BQB=0.522123;DP=2848;DP4=1231,1422,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.10783e-13;MQSB=0.154606;RPB=0.986756;SGB=64.5217;VDB=0.374066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.11:12293212 chr11:012293212 0 W/12293212-12293212 FN2378 SNP T -> G AC=1;AN=192;BQB=0.60777;DP=5154;DP4=2209,2641,11,28;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.50275e-23;MQSB=0.926274;RPB=0.106153;SGB=128.889;VDB=0.738876;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.11:12293419 chr11:012293419 0 W/12293419-12293419 FN439-S Single Base Substitution C-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN4146-S.SNP.11:12293964 chr11:012293964 0 W/12293964-12293964 FN4146-S SNP G -> C AC=1;AN=170;BQB=0.734799;DP=2760;DP4=1517,1163,10,16;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.91505e-13;MQSB=0.936001;RPB=0.992126;SGB=110.069;VDB=0.909905;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.11:12306429 chr11:012306429 0 W/12306429-12306429 FN2091-S SNP G -> A AC=1;AN=168;BQB=0.575008;DP=3417;DP4=1499,1821,23,11;HOB=7.08617e-05;ICB=0.000142567;MQ=26;MQ0F=0.0377524;MQB=0.000149207;MQSB=0;RPB=0.806054;SGB=-162.179;VDB=0.84485;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.11:12307368 chr11:012307368 0 W/12307368-12307368 FN1037-S Single Base Substitution C-T INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN1545-S.SNP.11:12308539 chr11:012308539 0 W/12308539-12308539 FN1545-S Single Base Substitution A-C INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN703-S.SNP.11:12555908 chr11:012555908 0 W/12555908-12555908 FN703-S Single Base Substitution A-T INTRON HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN703-S.SNP.11:12555910 chr11:012555910 0 W/12555910-12555910 FN703-S Single Base Substitution A-T INTRON HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN703-S.SNP.11:12555922 chr11:012555922 0 W/12555922-12555922 FN703-S Single Base Substitution A-T INTRON HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3599-S.SNP.11:12558462 chr11:012558462 0 W/12558462-12558462 FN3599-S SNP G -> A AC=1;AN=188;BQB=0.784614;DP=3013;DP4=1532,1427,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0295387;MQB=0.776995;MQSB=1.2551e-27;RPB=0.999541;SGB=50.1574;VDB=0.708404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R416K|504|LOC_Os11g21870|protein_coding|CODING|LOC_Os11g21870.1|3|1) FN509-S.SNP.11:12560644 chr11:012560644 0 W/12560644-12560644 FN509-S Single Base Substitution C-T INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN3404-S.SNP.11:12563884 chr11:012563884 0 W/12563884-12563884 FN3404-S SNP G -> T AC=1;AN=184;BQB=0.95841;DP=3810;DP4=1562,2159,2,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.2543e-08;MQSB=0.804367;RPB=0.983002;SGB=53.2642;VDB=0.770967;EFF=INTRON(MODIFIER||||503|LOC_Os11g21890|protein_coding|CODING|LOC_Os11g21890.1|5|1) FN2464.SNP.11:12565824 chr11:012565824 0 W/12565824-12565824 FN2464 SNP A -> C AC=1;AN=200;BQB=0.777677;DP=4306;DP4=2148,1923,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.68605e-10;MQSB=0.847648;RPB=0.997868;SGB=77.2904;VDB=0.0509526;EFF=INTRON(MODIFIER||||503|LOC_Os11g21890|protein_coding|CODING|LOC_Os11g21890.1|3|1) FN971-S.SNP.11:12577731 chr11:012577731 0 W/12577731-12577731 FN971-S Single Base Substitution C-A INTERGENIC HOMO SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN1513-S.SNP.11:12582569 chr11:012582569 0 W/12582569-12582569 FN1513-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN3412-S.SNP.11:12586703 chr11:012586703 0 W/12586703-12586703 FN3412-S SNP C -> T AC=1;AN=184;BQB=0.911025;DP=3865;DP4=1870,1848,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.25289e-10;MQSB=0.906881;RPB=0.730948;SGB=93.9603;VDB=0.563736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.11:12588248 chr11:012588248 0 W/12588248-12588248 FN2423 SNP G -> A AC=1;AN=200;BQB=0.309034;DP=4259;DP4=2005,1961,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9383e-05;MQSB=0.710471;RPB=0.955192;SGB=29.4541;VDB=0.496362;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C269|353|LOC_Os11g21940|protein_coding|CODING|LOC_Os11g21940.1|2|1) FN2223-S.SNP.11:12588808 chr11:012588808 0 W/12588808-12588808 FN2223-S SNP C -> T AC=1;AN=190;BQB=0.170591;DP=4682;DP4=2133,2268,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000427168;MQB=3.50921e-09;MQSB=5.74734e-06;RPB=0.101729;SGB=-13.222;VDB=0.386555;EFF=INTRON(MODIFIER||||353|LOC_Os11g21940|protein_coding|CODING|LOC_Os11g21940.1|1|1) FN591-S.SNP.11:12589474 chr11:012589474 0 W/12589474-12589474 FN591-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN2611-S.SNP.11:12590905 chr11:012590905 0 W/12590905-12590905 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.737331;DP=4649;DP4=2235,2164,13,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.79731e-10;MQSB=0.350794;RPB=0.993608;SGB=123.342;VDB=0.295216;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D382G|592|LOC_Os11g21950|protein_coding|CODING|LOC_Os11g21950.1|2|1) FN2756-S.SNP.11:12613191 chr11:012613191 0 W/12613191-12613191 FN2756-S SNP G -> T AC=2;AN=200;BQB=0.978072;DP=4673;DP4=2394,1980,23,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.08797e-21;MQSB=0.984624;RPB=0.210584;SGB=134.004;VDB=0.667377;EFF=INTERGENIC(MODIFIER||||||||||1) FN504-S.SNP.11:12619738 chr11:012619738 0 W/12619738-12619738 FN504-S Single Base Substitution G-C INTERGENIC HOMO SNo: 502, Mutant_ID: FN504-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-185.SNP.11:12622153 chr11:012622153 0 W/12622153-12622153 FN-185 Single Base Substitution A-G INTRON HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2422.SNP.11:12622635 chr11:012622635 0 W/12622635-12622635 FN2422 SNP C -> T AC=1;AN=200;BQB=0.859694;DP=4510;DP4=1946,2314,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221729;MQB=1.16405e-05;MQSB=0.999924;RPB=0.874973;SGB=35.8441;VDB=0.719467;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T860|1497|LOC_Os11g21980|protein_coding|CODING|LOC_Os11g21980.1|5|1) FN1196-S.SNP.11:12628894 chr11:012628894 0 W/12628894-12628894 FN1196-S Single Base Substitution T-C INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN3613-S.SNP.11:12632710 chr11:012632710 0 W/12632710-12632710 FN3613-S SNP T -> C AC=2;AN=190;BQB=0.897963;DP=2943;DP4=1515,1277,16,21;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=2.32906e-15;MQSB=0.676682;RPB=0.139309;SGB=121.394;VDB=0.0350674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3828-S.SNP.11:12633554 chr11:012633554 0 W/12633554-12633554 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.888258;DP=2563;DP4=1346,1145,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.49615e-11;MQSB=0.976345;RPB=0.561033;SGB=57.4238;VDB=0.857082;EFF=UTR_3_PRIME(MODIFIER||19||412|LOC_Os11g21990|protein_coding|CODING|LOC_Os11g21990.1|8|1) FN3577-S.SNP.11:12640229 chr11:012640229 0 W/12640229-12640229 FN3577-S SNP A -> C AC=1;AN=188;BQB=0.99997;DP=3075;DP4=1647,1293,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.94848e-11;MQSB=0.844904;RPB=0.884064;SGB=28.6195;VDB=0.112216;EFF=INTRON(MODIFIER||||412|LOC_Os11g21990|protein_coding|CODING|LOC_Os11g21990.1|1|1),INTRON(MODIFIER||||355|LOC_Os11g21990|protein_coding|CODING|LOC_Os11g21990.2|1|1) FN4300-S.SNP.11:12641080 chr11:012641080 0 W/12641080-12641080 FN4300-S SNP C -> T AC=2;AN=170;BQB=0.940505;DP=2436;DP4=1118,1234,11,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.35501e-09;MQSB=0.802745;RPB=0.999971;SGB=52.0913;VDB=0.3436;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.11:12641080 chr11:012641080 0 W/12641080-12641080 FN942-S Single Base Substitution C-T INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2276-S.SNP.11:12643132 chr11:012643132 0 W/12643132-12643132 FN2276-S SNP C -> T AC=1;AN=190;BQB=0.997272;DP=4928;DP4=2155,2360,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14715e-10;MQSB=0.470353;RPB=0.975695;SGB=71.8647;VDB=0.079649;EFF=INTERGENIC(MODIFIER||||||||||1) FN835-S.SNP.11:12643181 chr11:012643181 0 W/12643181-12643181 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN1517-S.SNP.11:12645430 chr11:012645430 0 W/12645430-12645430 FN1517-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os11g22000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN-79.SNP.11:12645753 chr11:012645753 0 W/12645753-12645753 FN-79 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g22000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN2789-S.SNP.11:12647944 chr11:012647944 0 W/12647944-12647944 FN2789-S SNP G -> A AC=1;AN=198;BQB=0.510154;DP=2971;DP4=1222,1146,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.40443e-07;MQSB=0.94632;RPB=0.249511;SGB=36.5539;VDB=0.0157305;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.11:12653149 chr11:012653149 0 W/12653149-12653149 FN1640-S Single Base Substitution C-A INTRON HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN2323.SNP.11:12658506 chr11:012658506 0 W/12658506-12658506 FN2323 SNP G -> A AC=2;AN=192;BQB=0.987397;DP=4952;DP4=2268,2352,26,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.20689e-29;MQSB=0.820282;RPB=0.984316;SGB=196.611;VDB=0.401607;EFF=INTRON(MODIFIER||||734|LOC_Os11g22020|protein_coding|CODING|LOC_Os11g22020.1|7|1) FN3991-S.SNP.11:12666951 chr11:012666951 0 W/12666951-12666951 FN3991-S SNP C -> T AC=1;AN=168;BQB=0.996031;DP=2324;DP4=1081,1138,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0124785;MQB=0.00187742;MQSB=0.00125254;RPB=0.713264;SGB=69.8961;VDB=0.122076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.11:12670327 chr11:012670327 0 W/12670327-12670327 FN2338 SNP A -> G AC=1;AN=192;BQB=0.935346;DP=5420;DP4=2541,2442,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.91833e-15;MQSB=0.763522;RPB=0.0459329;SGB=22.9983;VDB=0.675619;EFF=INTRON(MODIFIER||||321|LOC_Os11g22030|protein_coding|CODING|LOC_Os11g22030.1|4|1) FN1412-S.SNP.11:12682719 chr11:012682719 0 W/12682719-12682719 FN1412-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g22070 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN3793-S.SNP.11:12683054 chr11:012683054 0 W/12683054-12683054 FN3793-S SNP C -> T AC=1;AN=190;BQB=0.999554;DP=2794;DP4=1210,1492,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30239e-08;MQSB=0.964807;RPB=0.888183;SGB=62.7569;VDB=0.51429;EFF=INTRON(MODIFIER||||134|LOC_Os11g22070|protein_coding|CODING|LOC_Os11g22070.1|1|1) FN391-S.SNP.11:12683377 chr11:012683377 0 W/12683377-12683377 FN391-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3860-S.SNP.11:12685421 chr11:012685421 0 W/12685421-12685421 FN3860-S SNP C -> A AC=1;AN=158;BQB=0.20772;DP=2300;DP4=1232,929,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.8267e-06;MQSB=0.439837;RPB=0.946073;SGB=47.5512;VDB=0.251074;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.11:12689574 chr11:012689574 0 W/12689574-12689574 FN1363-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g22100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2471.SNP.11:12692535 chr11:012692535 0 W/12692535-12692535 FN2471 SNP C -> G AC=1;AN=200;BQB=0.81054;DP=4068;DP4=2001,1771,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.32547e-13;MQSB=0.155746;RPB=0.0519579;SGB=72.7161;VDB=0.594894;EFF=INTERGENIC(MODIFIER||||||||||1) FN-26.SNP.11:12692693 chr11:012692693 0 W/12692693-12692693 FN-26 Single Base Substitution A-G INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN2385.SNP.11:12700186 chr11:012700186 0 W/12700186-12700186 FN2385 SNP G -> A AC=1;AN=192;BQB=0.596087;DP=4597;DP4=2097,2236,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.02536e-08;MQSB=0.723125;RPB=0.310048;SGB=-78.8817;VDB=0.101863;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T192|268|LOC_Os11g22130|protein_coding|CODING|LOC_Os11g22130.1|2|1) FN1129-S.SNP.11:12707277 chr11:012707277 0 W/12707277-12707277 FN1129-S Single Base Substitution C-A INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN1426-S.SNP.11:12714332 chr11:012714332 0 W/12714332-12714332 FN1426-S Single Base Substitution C-G INTRON HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3664-S.SNP.11:12715180 chr11:012715180 0 W/12715180-12715180 FN3664-S SNP G -> A AC=2;AN=190;BQB=0.671505;DP=2524;DP4=1219,1212,13,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.66421e-10;MQSB=0.907556;RPB=0.545326;SGB=64.5316;VDB=0.39818;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K458|1367|LOC_Os11g22160|protein_coding|CODING|LOC_Os11g22160.1|3|1) FN3382-S.SNP.11:12717736 chr11:012717736 0 W/12717736-12717736 FN3382-S SNP T -> A AC=1;AN=184;BQB=0.917338;DP=2897;DP4=1468,1336,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.51557e-12;MQSB=0.542247;RPB=0.936192;SGB=78.0093;VDB=0.585454;EFF=INTRON(MODIFIER||||1367|LOC_Os11g22160|protein_coding|CODING|LOC_Os11g22160.1|8|1) FN748-S.SNP.11:12718569 chr11:012718569 0 W/12718569-12718569 FN748-S Single Base Substitution T-A INTRON HOMO SNo: 671, Mutant_ID: FN748-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1324-S.SNP.11:12718925 chr11:012718925 0 W/12718925-12718925 FN1324-S Single Base Substitution C-A INTRON HOMO SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN769-S.SNP.11:12724547 chr11:012724547 0 W/12724547-12724547 FN769-S Single Base Substitution G-C INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3716-S.SNP.11:12724741 chr11:012724741 0 W/12724741-12724741 FN3716-S SNP T -> G AC=1;AN=190;BQB=0.296851;DP=3040;DP4=1489,1381,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000657895;MQB=1.19107e-05;MQSB=0.787461;RPB=0.701407;SGB=1.00337;VDB=0.554251;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.11:12724933 chr11:012724933 0 W/12724933-12724933 FN1410-S Single Base Substitution C-G INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN-223.SNP.11:12725366 chr11:012725366 0 W/12725366-12725366 FN-223 Single Base Substitution G-A INTERGENIC HET SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN_807-3-1.SNP.11:12728673 chr11:012728673 0 W/12728673-12728673 FN_807-3-1 Single Base Substitution C-T Homo SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2474.SNP.11:12732875 chr11:012732875 0 W/12732875-12732875 FN2474 SNP T -> C AC=1;AN=200;BQB=0.914699;DP=4940;DP4=2494,2124,12,10;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0048583;MQB=0.240133;MQSB=0.209378;RPB=0.999725;SGB=95.7111;VDB=0.369477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.11:12733590 chr11:012733590 0 W/12733590-12733590 FN3837-S SNP G -> A AC=1;AN=190;BQB=0.966203;DP=2119;DP4=988,1048,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00566305;MQB=0.00490253;MQSB=0.962298;RPB=0.756652;SGB=21.8853;VDB=0.816978;EFF=INTRON(MODIFIER||||703|LOC_Os11g22190|protein_coding|CODING|LOC_Os11g22190.1|1|1) FN-40.SNP.11:12737004 chr11:012737004 0 W/12737004-12737004 FN-40 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os11g22190 transposon protein, putative, unclassified SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN438-S.SNP.11:12738525 chr11:012738525 0 W/12738525-12738525 FN438-S Single Base Substitution C-T INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN803-S.SNP.11:12738525 chr11:012738525 0 W/12738525-12738525 FN803-S Single Base Substitution C-T INTERGENIC HOMO SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2283.SNP.11:12742756 chr11:012742756 0 W/12742756-12742756 FN2283 SNP T -> C AC=1;AN=192;BQB=0.231458;DP=5421;DP4=2725,2458,16,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0783e-18;MQSB=0.0102431;RPB=0.840075;SGB=125.324;VDB=0.524718;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.11:12749513 chr11:012749513 0 W/12749513-12749513 FN-159 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g22220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN-69.SNP.11:12750707 chr11:012750707 0 W/12750707-12750707 FN-69 Single Base Substitution A-G INTRON HET SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2542-S.SNP.11:12752488 chr11:012752488 0 W/12752488-12752488 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.927169;DP=4352;DP4=2153,1982,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000459559;MQB=5.34092e-08;MQSB=0.151336;RPB=0.659084;SGB=77.1196;VDB=0.149644;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S365|1109|LOC_Os11g22220|protein_coding|CODING|LOC_Os11g22220.1|3|1) FN3357-S.SNP.11:12755162 chr11:012755162 0 W/12755162-12755162 FN3357-S SNP T -> C AC=2;AN=184;BQB=0.633382;DP=2996;DP4=1288,1564,14,22;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00367156;MQB=1.75832e-13;MQSB=0.963321;RPB=0.835225;SGB=157.265;VDB=0.30045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.11:12755388 chr11:012755388 0 W/12755388-12755388 FN1412-S Single Base Substitution C-T INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN4224-S.SNP.11:12761900 chr11:012761900 0 W/12761900-12761900 FN4224-S SNP C -> G AC=1;AN=170;BQB=0.988376;DP=2310;DP4=1018,1233,7,3;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0354978;MQB=0.203715;MQSB=0.538653;RPB=0.935451;SGB=38.987;VDB=0.99222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S909T|1273|LOC_Os11g22240|protein_coding|CODING|LOC_Os11g22240.1|7|1) FN2723-S.SNP.11:12761990 chr11:012761990 0 W/12761990-12761990 FN2723-S SNP C -> A AC=1;AN=200;BQB=0.755236;DP=5236;DP4=1866,3067,5,5;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00668449;MQB=0.0140587;MQSB=0.000929469;RPB=0.975627;SGB=25.849;VDB=0.337328;EFF=INTRON(MODIFIER||||1273|LOC_Os11g22240|protein_coding|CODING|LOC_Os11g22240.1|6|1) FN-28.SNP.11:12763680 chr11:012763680 0 W/12763680-12763680 FN-28 Single Base Substitution A-C NON_SYNONYMOUS_CODING Homo LOC_Os11g22240 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 28, Mutant_ID: FN-28, Generation: M2, Mutations: 31, Genes: 9, Seed availability: Yes. FN677-S.SNP.11:12774387 chr11:012774387 0 W/12774387-12774387 FN677-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g22280 retrotransposon protein, putative, unclassified, expressed SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN680-S.SNP.11:12774838 chr11:012774838 0 W/12774838-12774838 FN680-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3832-S.SNP.11:12774886 chr11:012774886 0 W/12774886-12774886 FN3832-S SNP C -> T AC=1;AN=190;BQB=0.992742;DP=3134;DP4=1370,1653,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.88301e-09;MQSB=0.841109;RPB=0.906272;SGB=46.7622;VDB=0.68766;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S114|320|LOC_Os11g22280|protein_coding|CODING|LOC_Os11g22280.1|1|1) FN4150-S.SNP.11:12779148 chr11:012779148 0 W/12779148-12779148 FN4150-S SNP A -> T AC=1;AN=170;BQB=0.55577;DP=2506;DP4=1140,1245,10,3;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=1.45378e-07;MQSB=0.0824774;RPB=0.990664;SGB=52.3148;VDB=0.676481;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.11:12785857 chr11:012785857 0 W/12785857-12785857 FN908-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g22300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN-70.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN-70 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN2229-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN2229-S SNP G -> A AC=2;AN=190;BQB=0.820445;DP=4696;DP4=2144,2252,30,39;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.49872e-23;MQSB=0.917078;RPB=0.628803;SGB=235.118;VDB=0.757502;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q668*|925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|6|1);LOF=(LOC_Os11g22310|LOC_Os11g22310|1|1.00);NMD=(LOC_Os11g22310|LOC_Os11g22310|1|1.00) FN2293.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN2293 SNP G -> A AC=2;AN=192;BQB=0.97708;DP=4703;DP4=2275,2185,11,15;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.32821e-10;MQSB=0.545711;RPB=0.666503;SGB=82.5522;VDB=0.442354;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q668*|925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|6|1);LOF=(LOC_Os11g22310|LOC_Os11g22310|1|1.00);NMD=(LOC_Os11g22310|LOC_Os11g22310|1|1.00) FN3332-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN3332-S SNP G -> A AC=1;AN=184;BQB=0.999494;DP=3062;DP4=1471,1510,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.24246e-05;MQSB=0.642456;RPB=0.871181;SGB=75.8731;VDB=0.0483828;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q668*|925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|6|1);LOF=(LOC_Os11g22310|LOC_Os11g22310|1|1.00);NMD=(LOC_Os11g22310|LOC_Os11g22310|1|1.00) FN3627-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN3627-S SNP G -> A AC=1;AN=190;BQB=0.609127;DP=2788;DP4=1238,1463,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.000344753;MQSB=0.019399;RPB=0.611064;SGB=18.552;VDB=0.871867;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q668*|925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|6|1);LOF=(LOC_Os11g22310|LOC_Os11g22310|1|1.00);NMD=(LOC_Os11g22310|LOC_Os11g22310|1|1.00) FN3923-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN3923-S SNP G -> A AC=1;AN=158;BQB=0.953242;DP=2493;DP4=1161,1256,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=4.70918e-06;MQSB=0.989403;RPB=0.398159;SGB=47.0672;VDB=0.790005;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q668*|925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|6|1);LOF=(LOC_Os11g22310|LOC_Os11g22310|1|1.00);NMD=(LOC_Os11g22310|LOC_Os11g22310|1|1.00) FN420-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN420-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN680-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN680-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN796-S.SNP.11:12788717 chr11:012788717 0 W/12788717-12788717 FN796-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN3710-S.SNP.11:12790488 chr11:012790488 0 W/12790488-12790488 FN3710-S SNP G -> A AC=1;AN=190;BQB=0.456211;DP=2974;DP4=1475,1393,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.82036e-08;MQSB=0.824061;RPB=0.973644;SGB=33.8752;VDB=0.606666;EFF=INTRON(MODIFIER||||925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|2|1) FN3353-S.SNP.11:12791473 chr11:012791473 0 W/12791473-12791473 FN3353-S SNP G -> A AC=1;AN=184;BQB=0.9862;DP=3824;DP4=2124,1579,12,14;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.13886;MQB=0.179599;MQSB=0;RPB=0.113831;SGB=81.5311;VDB=0.028174;EFF=INTRON(MODIFIER||||925|LOC_Os11g22310|protein_coding|CODING|LOC_Os11g22310.1|1|1) FN369-S.SNP.11:12796622 chr11:012796622 0 W/12796622-12796622 FN369-S Single Base Substitution G-C INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3687-S.SNP.11:12797563 chr11:012797563 0 W/12797563-12797563 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.937434;DP=2929;DP4=1583,1240,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=2.40453e-06;MQSB=0.971579;RPB=0.502249;SGB=58.2031;VDB=0.467553;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.11:12803556 chr11:012803556 0 W/12803556-12803556 FN3916-S SNP G -> T AC=1;AN=158;BQB=0.995454;DP=2733;DP4=1333,1302,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.48409e-08;MQSB=0.573645;RPB=0.840962;SGB=51.4366;VDB=0.85881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L523I|971|LOC_Os11g22336|protein_coding|CODING|LOC_Os11g22336.1|2|1) FN2651-S.SNP.11:12806471 chr11:012806471 0 W/12806471-12806471 FN2651-S SNP G -> A AC=1;AN=200;BQB=0.732797;DP=4613;DP4=2305,2040,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91826e-16;MQSB=0.985303;RPB=0.780847;SGB=63.3521;VDB=0.807908;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.11:12817929 chr11:012817929 0 W/12817929-12817929 FN-191 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g22350 white-brown complex homolog protein, putative, expressed SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN4344-S.SNP.11:12821916 chr11:012821916 0 W/12821916-12821916 FN4344-S SNP T -> C AC=1;AN=170;BQB=0.998647;DP=2580;DP4=1328,1185,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.59945e-06;MQSB=0.989069;RPB=0.312491;SGB=43.4296;VDB=0.574293;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.11:12836226 chr11:012836226 0 W/12836226-12836226 FN-335 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g22380 retrotransposon protein, putative, unclassified SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3708-S.SNP.11:12839507 chr11:012839507 0 W/12839507-12839507 FN3708-S SNP G -> A AC=2;AN=190;BQB=0.984671;DP=2810;DP4=1321,1373,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.73482e-15;MQSB=0.935;RPB=0.365604;SGB=112.85;VDB=0.751565;EFF=INTRON(MODIFIER||||73|LOC_Os11g22390|protein_coding|CODING|LOC_Os11g22390.1|2|1) FN2347.SNP.11:12846442 chr11:012846442 0 W/12846442-12846442 FN2347 SNP A -> G AC=2;AN=192;BQB=0.101603;DP=4992;DP4=2077,2593,20,39;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.0346554;MQB=0.000433998;MQSB=1.90783e-25;RPB=0.356145;SGB=200.176;VDB=0.363712;EFF=INTERGENIC(MODIFIER||||||||||1) FN3463-S.SNP.11:12847778 chr11:012847778 0 W/12847778-12847778 FN3463-S SNP T -> C AC=1;AN=184;BQB=0.777902;DP=2925;DP4=1709,1129,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.36013e-06;MQSB=0.214154;RPB=0.207069;SGB=32.2261;VDB=0.610622;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.11:12853748 chr11:012853748 0 W/12853748-12853748 FN1540-S Single Base Substitution T-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN1719-S.SNP.11:12866099 chr11:012866099 0 W/12866099-12866099 FN1719-S SNP C -> T AC=2;AN=188;BQB=0.995458;DP=3213;DP4=2234,921,15,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.26851e-14;MQSB=0.92062;RPB=0.575718;SGB=20.9711;VDB=0.461841;EFF=INTERGENIC(MODIFIER||||||||||1) FN662-S.SNP.11:12870979 chr11:012870979 0 W/12870979-12870979 FN662-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g22420 retrotransposon, putative, centromere-specific, expressed SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN3851-S.SNP.11:12875586 chr11:012875586 0 W/12875586-12875586 FN3851-S SNP A -> C AC=1;AN=158;BQB=0.995045;DP=2537;DP4=1345,1045,10,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.57033e-09;MQSB=0.191732;RPB=0.0968157;SGB=77.6532;VDB=0.0185069;EFF=INTERGENIC(MODIFIER||||||||||1) FN828-S.SNP.11:12876313 chr11:012876313 0 W/12876313-12876313 FN828-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN3517-S.SNP.11:12876875 chr11:012876875 0 W/12876875-12876875 FN3517-S SNP C -> A AC=2;AN=188;BQB=0.955672;DP=2932;DP4=1465,1382,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.37657e-12;MQSB=0.996566;RPB=0.75795;SGB=67.8739;VDB=0.381179;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W1151L|1431|LOC_Os11g22430|protein_coding|CODING|LOC_Os11g22430.1|9|1) FN1485-S.SNP.11:12881726 chr11:012881726 0 W/12881726-12881726 FN1485-S Single Base Substitution C-G INTRON HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2618-S.SNP.11:12882918 chr11:012882918 0 W/12882918-12882918 FN2618-S SNP A -> T AC=2;AN=198;BQB=0.607141;DP=3381;DP4=1312,1542,17,28;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=4.68638e-12;MQSB=0.720648;RPB=0.927238;SGB=34.2242;VDB=0.15625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L4H|1431|LOC_Os11g22430|protein_coding|CODING|LOC_Os11g22430.1|1|1) FN-269.SNP.11:12885199 chr11:012885199 0 W/12885199-12885199 FN-269 Single Base Substitution T-A INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN1401-S.SNP.11:12887052 chr11:012887052 0 W/12887052-12887052 FN1401-S Single Base Substitution C-A INTRON HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3389-S.SNP.11:12890937 chr11:012890937 0 W/12890937-12890937 FN3389-S SNP T -> C AC=1;AN=184;BQB=0.501285;DP=3257;DP4=1345,1721,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10658e-16;MQSB=0.575165;RPB=0.934726;SGB=53.5365;VDB=0.776644;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.11:12891605 chr11:012891605 0 W/12891605-12891605 FN3345-S SNP C -> A AC=2;AN=184;BQB=0.863643;DP=2989;DP4=1428,1432,16,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.09035e-16;MQSB=0.931303;RPB=0.844603;SGB=125.613;VDB=0.338922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN1022-S Single Base Substitution G-C INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN2595-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN2595-S SNP G -> C AC=2;AN=198;BQB=0.471692;DP=3816;DP4=1604,1827,12,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=8.97597e-20;MQSB=0.968032;RPB=0.846411;SGB=33.2762;VDB=0.901398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN2698-S SNP G -> C AC=2;AN=200;BQB=0.999172;DP=4333;DP4=1833,2148,13,10;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000230787;MQB=2.56035e-13;MQSB=0.955456;RPB=0.74227;SGB=72.7161;VDB=0.774793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN3050-S SNP G -> C AC=2;AN=184;BQB=0.916084;DP=3350;DP4=1428,1749,9,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000298507;MQB=1.42652e-15;MQSB=0.0919772;RPB=0.749781;SGB=53.5365;VDB=0.324482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3495-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN3495-S SNP G -> C AC=2;AN=188;BQB=0.916078;DP=3281;DP4=1569,1542,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000304785;MQB=1.80664e-11;MQSB=0.44496;RPB=0.989849;SGB=74.9605;VDB=0.303933;EFF=INTERGENIC(MODIFIER||||||||||1) FN401-S.SNP.11:12896705 chr11:012896705 0 W/12896705-12896705 FN401-S Single Base Substitution G-C INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN2785-S.SNP.11:12897101 chr11:012897101 0 W/12897101-12897101 FN2785-S SNP G -> A AC=1;AN=198;BQB=0.066556;DP=3940;DP4=1814,1831,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14008e-10;MQSB=0.980506;RPB=0.978049;SGB=39.7248;VDB=0.954255;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.11:12901836 chr11:012901836 0 W/12901836-12901836 FN347-S Single Base Substitution G-T INTRON HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2222-S.SNP.11:12905071 chr11:012905071 0 W/12905071-12905071 FN2222-S SNP T -> C AC=1;AN=190;BQB=0.986536;DP=5346;DP4=2389,2648,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.3565e-12;MQSB=0.749283;RPB=0.904078;SGB=85.8548;VDB=0.664492;EFF=INTRON(MODIFIER||||56|LOC_Os11g22449|protein_coding|CODING|LOC_Os11g22449.1|1|1) FN1449-S.SNP.11:12905599 chr11:012905599 0 W/12905599-12905599 FN1449-S Single Base Substitution C-T INTERGENIC HET SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN1031-S.SNP.11:12905866 chr11:012905866 0 W/12905866-12905866 FN1031-S Single Base Substitution C-A INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2282.SNP.11:12908365 chr11:012908365 0 W/12908365-12908365 FN2282 SNP C -> T AC=1;AN=192;BQB=0.959842;DP=4804;DP4=2446,2073,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=1.99203e-11;MQSB=0.0520702;RPB=0.132997;SGB=-7.43215;VDB=0.421413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.11:12911121 chr11:012911121 0 W/12911121-12911121 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.279941;DP=4720;DP4=2417,2047,6,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=7.84327e-07;MQSB=0.162176;RPB=0.172041;SGB=58.8698;VDB=0.241148;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.11:12913892 chr11:012913892 0 W/12913892-12913892 FN-170 Single Base Substitution A-G INTERGENIC HET SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN937-S.SNP.11:12915662 chr11:012915662 0 W/12915662-12915662 FN937-S Single Base Substitution C-G INTERGENIC HET SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN2249-S.SNP.11:12918286 chr11:012918286 0 W/12918286-12918286 FN2249-S SNP A -> T AC=1;AN=190;BQB=0.439326;DP=4829;DP4=2359,2103,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.1305e-08;MQSB=0.767516;RPB=0.153576;SGB=8.77275;VDB=0.210319;EFF=INTERGENIC(MODIFIER||||||||||1) FN321-S.SNP.11:12924815 chr11:012924815 0 W/12924815-12924815 FN321-S Single Base Substitution T-C INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN-380.SNP.11:12926799 chr11:012926799 0 W/12926799-12926799 FN-380 Single Base Substitution T-A INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2711-S.SNP.11:12929303 chr11:012929303 0 W/12929303-12929303 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.19382;DP=4679;DP4=2333,2121,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86362e-11;MQSB=0.98224;RPB=0.892683;SGB=58.2954;VDB=0.939904;EFF=INTERGENIC(MODIFIER||||||||||1) FN808-S.SNP.11:12931067 chr11:012931067 0 W/12931067-12931067 FN808-S Single Base Substitution G-T INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN2378.SNP.11:12931203 chr11:012931203 0 W/12931203-12931203 FN2378 SNP C -> T AC=1;AN=192;BQB=0.571993;DP=4898;DP4=2023,2605,19,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000204165;MQB=4.83838e-13;MQSB=0.963032;RPB=0.996825;SGB=-6.8678;VDB=0.211636;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.11:12935382 chr11:012935382 0 W/12935382-12935382 FN-305 Single Base Substitution G-A INTRON HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3968-S.SNP.11:12935382 chr11:012935382 0 W/12935382-12935382 FN3968-S SNP G -> A AC=1;AN=168;BQB=0.969123;DP=2897;DP4=1505,1268,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.24815e-12;MQSB=0.959273;RPB=0.758942;SGB=83.1885;VDB=0.094337;EFF=INTRON(MODIFIER||||318|LOC_Os11g22500|protein_coding|CODING|LOC_Os11g22500.1|1|1) FN3506-S.SNP.11:12936732 chr11:012936732 0 W/12936732-12936732 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.993046;DP=2651;DP4=1128,1462,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.30622e-06;MQSB=0.96301;RPB=0.399705;SGB=35.3493;VDB=0.168864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.11:12937846 chr11:012937846 0 W/12937846-12937846 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.910342;DP=2755;DP4=1284,1370,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.11932e-10;MQSB=0.895623;RPB=0.913761;SGB=62.7569;VDB=0.135432;EFF=INTRON(MODIFIER||||683|LOC_Os11g22510|protein_coding|CODING|LOC_Os11g22510.1|1|1) FN2438.SNP.11:12942538 chr11:012942538 0 W/12942538-12942538 FN2438 SNP G -> A AC=1;AN=200;BQB=0.988694;DP=4081;DP4=2248,1524,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.1192e-14;MQSB=0.791595;RPB=0.947438;SGB=17.5158;VDB=0.98684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1179V|1427|LOC_Os11g22530|protein_coding|CODING|LOC_Os11g22530.1|11|1) FN1657-S.SNP.11:12945143 chr11:012945143 0 W/12945143-12945143 FN1657-S Single Base Substitution C-A STOP_GAINED HET LOC_Os11g22530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3581-S.SNP.11:12945925 chr11:012945925 0 W/12945925-12945925 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.973716;DP=2810;DP4=1351,1354,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.55916e-12;MQSB=0.96845;RPB=0.716767;SGB=80.9724;VDB=0.337238;EFF=INTRON(MODIFIER||||1427|LOC_Os11g22530|protein_coding|CODING|LOC_Os11g22530.1|5|1) FN2120-S.SNP.11:12946181 chr11:012946181 0 W/12946181-12946181 FN2120-S SNP T -> C AC=1;AN=168;BQB=0.16852;DP=3594;DP4=1760,1784,19,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.5118e-16;MQSB=0.996778;RPB=0.181929;SGB=-47.4735;VDB=0.8486;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I338V|1427|LOC_Os11g22530|protein_coding|CODING|LOC_Os11g22530.1|5|1) FN2437.SNP.11:12952173 chr11:012952173 0 W/12952173-12952173 FN2437 SNP G -> T AC=1;AN=200;BQB=0.99069;DP=4622;DP4=2333,2051,10,2;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00324535;MQB=5.19044e-05;MQSB=1.26284e-11;RPB=0.792909;SGB=49.6594;VDB=0.646266;EFF=INTRON(MODIFIER||||1569|LOC_Os11g22540|protein_coding|CODING|LOC_Os11g22540.1|1|1) FN3515-S.SNP.11:12959776 chr11:012959776 0 W/12959776-12959776 FN3515-S SNP G -> T AC=1;AN=188;BQB=0.978977;DP=3174;DP4=1888,1174,16,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00031506;MQB=1.227e-10;MQSB=0.949468;RPB=0.954973;SGB=89.8686;VDB=0.75976;EFF=INTRON(MODIFIER||||1569|LOC_Os11g22540|protein_coding|CODING|LOC_Os11g22540.1|5|1) FN2684-S.SNP.11:12961857 chr11:012961857 0 W/12961857-12961857 FN2684-S SNP A -> G AC=1;AN=200;BQB=0.718369;DP=4915;DP4=2486,2217,9,10;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00752798;MQB=0.000223292;MQSB=0.0110207;RPB=0.774509;SGB=34.6953;VDB=0.110646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.11:12962417 chr11:012962417 0 W/12962417-12962417 FN3928-S SNP G -> A AC=1;AN=158;BQB=0.9488;DP=2628;DP4=1281,1247,12,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.47126e-11;MQSB=0.966196;RPB=0.720327;SGB=57.6596;VDB=0.309311;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.11:12965851 chr11:012965851 0 W/12965851-12965851 FN318-S Single Base Substitution G-C INTRON HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2474.SNP.11:12965994 chr11:012965994 0 W/12965994-12965994 FN2474 SNP T -> C AC=1;AN=200;BQB=0.217709;DP=4535;DP4=1893,2410,8,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.45538e-09;MQSB=0.00301365;RPB=0.635338;SGB=86.5007;VDB=0.0491003;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E1000G|1045|LOC_Os11g22550|protein_coding|CODING|LOC_Os11g22550.1|5|1) FN627-S.SNP.11:12969401 chr11:012969401 0 W/12969401-12969401 FN627-S Single Base Substitution T-G INTRON HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. W138-2-1.SNP.11:12973316 chr11:012973316 0 W/12973316-12973316 W138-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1069-S.SNP.11:12973844 chr11:012973844 0 W/12973844-12973844 FN1069-S Single Base Substitution C-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. W450-6-1.SNP.11:12976282 chr11:012976282 0 W/12976282-12976282 W450-6-1 Single Base Substitution C-G INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-115.SNP.11:12978609 chr11:012978609 0 W/12978609-12978609 FN-115 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g22570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN431-S.SNP.11:12980550 chr11:012980550 0 W/12980550-12980550 FN431-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g22570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN3854-S.SNP.11:12982601 chr11:012982601 0 W/12982601-12982601 FN3854-S SNP A -> G AC=1;AN=158;BQB=0.600564;DP=2600;DP4=1278,1211,15,8;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.0311538;MQB=0.0104469;MQSB=0.970963;RPB=0.948762;SGB=40.4048;VDB=0.92415;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgT/tgC|C297|1509|LOC_Os11g22570|protein_coding|CODING|LOC_Os11g22570.1|4|1) FN1301-S.SNP.11:12982708 chr11:012982708 0 W/12982708-12982708 FN1301-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g22570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN680-S.SNP.11:12985606 chr11:012985606 0 W/12985606-12985606 FN680-S Single Base Substitution G-A INTERGENIC HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN-177.SNP.11:12991075 chr11:012991075 0 W/12991075-12991075 FN-177 Single Base Substitution G-A INTRON HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN3540-S.SNP.11:12994104 chr11:012994104 0 W/12994104-12994104 FN3540-S SNP T -> C AC=1;AN=188;BQB=0.999789;DP=2611;DP4=1250,1279,12,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00344696;MQB=6.60067e-09;MQSB=0.964041;RPB=0.452258;SGB=50.1574;VDB=0.200553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F894S|962|LOC_Os11g22580|protein_coding|CODING|LOC_Os11g22580.1|13|1) FN-166.SNP.11:12995041 chr11:012995041 0 W/12995041-12995041 FN-166 Single Base Substitution C-T INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3892-S.SNP.11:12996303 chr11:012996303 0 W/12996303-12996303 FN3892-S SNP G -> A AC=2;AN=158;BQB=0.997371;DP=2318;DP4=1119,1110,12,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.59208e-12;MQSB=0.94085;RPB=0.995609;SGB=86.3921;VDB=0.125851;EFF=SPLICE_SITE_REGION(LOW||||305|LOC_Os11g22590|protein_coding|CODING|LOC_Os11g22590.1|1|1),INTRON(MODIFIER||||305|LOC_Os11g22590|protein_coding|CODING|LOC_Os11g22590.1|1|1) FN-178.SNP.11:12998495 chr11:012998495 0 W/12998495-12998495 FN-178 Single Base Substitution C-A INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN-222.SNP.11:12998748 chr11:012998748 0 W/12998748-12998748 FN-222 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g22600 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN2597-S.SNP.11:12998913 chr11:012998913 0 W/12998913-12998913 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.394553;DP=5267;DP4=2827,2137,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0480349;MQB=0.394972;MQSB=0;RPB=0.931626;SGB=86.3098;VDB=0.0207809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R317C|591|LOC_Os11g22600|protein_coding|CODING|LOC_Os11g22600.1|3|1) FN662-S.SNP.11:13006358 chr11:013006358 0 W/13006358-13006358 FN662-S Single Base Substitution G-C INTERGENIC HOMO SNo: 602, Mutant_ID: FN662-S, Generation: M2, Mutations: 53, Genes: 40, Seed availability: Yes. FN1720-S.SNP.11:13011144 chr11:013011144 0 W/13011144-13011144 FN1720-S SNP T -> C AC=2;AN=188;BQB=0.0286135;DP=2875;DP4=1707,1113,22,11;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00278261;MQB=6.09327e-13;MQSB=0.674103;RPB=0.998336;SGB=-80.8397;VDB=0.689811;EFF=INTERGENIC(MODIFIER||||||||||1) FN-359.SNP.11:13012316 chr11:013012316 0 W/13012316-13012316 FN-359 Single Base Substitution C-A INTERGENIC HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN1394-S.SNP.11:13013098 chr11:013013098 0 W/13013098-13013098 FN1394-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g22630 expressed protein SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN-159.SNP.11:13014394 chr11:013014394 0 W/13014394-13014394 FN-159 Single Base Substitution C-G INTRON HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN3652-S.SNP.11:13015069 chr11:013015069 0 W/13015069-13015069 FN3652-S SNP C -> A AC=2;AN=190;BQB=0.916634;DP=3233;DP4=1512,1587,18,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.33815e-14;MQSB=0.952654;RPB=0.996851;SGB=103.742;VDB=0.246986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A65S|526|LOC_Os11g22630|protein_coding|CODING|LOC_Os11g22630.1|1|1) FN2110-S.SNP.11:13016509 chr11:013016509 0 W/13016509-13016509 FN2110-S SNP T -> C AC=1;AN=168;BQB=0.338022;DP=4279;DP4=2000,2216,18,16;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0259406;MQB=0.222132;MQSB=2.56317e-20;RPB=0.466575;SGB=-162.179;VDB=0.167457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.11:13018821 chr11:013018821 0 W/13018821-13018821 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.709589;DP=3345;DP4=1804,1423,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000513129;MQSB=0.866413;RPB=0.999665;SGB=21.6609;VDB=0.583058;EFF=INTRON(MODIFIER||||257|LOC_Os11g22640|protein_coding|CODING|LOC_Os11g22640.1|1|1) FN2410.SNP.11:13021301 chr11:013021301 0 W/13021301-13021301 FN2410 SNP T -> C AC=1;AN=200;BQB=0.919481;DP=4299;DP4=1946,1882,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90559e-06;MQSB=0.256668;RPB=0.523055;SGB=21.6694;VDB=0.472475;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.11:13023698 chr11:013023698 0 W/13023698-13023698 FN-305 Single Base Substitution C-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN1596-S.SNP.11:13029333 chr11:013029333 0 W/13029333-13029333 FN1596-S Single Base Substitution G-A INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2333.SNP.11:13031883 chr11:013031883 0 W/13031883-13031883 FN2333 SNP A -> C AC=1;AN=192;BQB=0.879165;DP=5248;DP4=2478,2474,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.37799e-07;MQSB=0.999831;RPB=0.829644;SGB=-16.4617;VDB=0.231694;EFF=INTERGENIC(MODIFIER||||||||||1) FN337-S.SNP.11:13032440 chr11:013032440 0 W/13032440-13032440 FN337-S Single Base Substitution G-A INTRON HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN4020-S.SNP.11:13033649 chr11:013033649 0 W/13033649-13033649 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.727026;DP=2586;DP4=1243,1180,17,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0258e-12;MQSB=0.913982;RPB=0.703519;SGB=21.3605;VDB=0.780145;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.11:13046152 chr11:013046152 0 W/13046152-13046152 FN563-S Single Base Substitution G-T INTERGENIC HET SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3801-S.SNP.11:13046349 chr11:013046349 0 W/13046349-13046349 FN3801-S SNP G -> A AC=2;AN=190;BQB=0.726414;DP=2056;DP4=1170,692,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000486381;MQB=2.26981e-11;MQSB=0.0766898;RPB=0.974335;SGB=75.1932;VDB=0.414899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.11:13046725 chr11:013046725 0 W/13046725-13046725 FN1754-S SNP C -> T AC=1;AN=188;BQB=0.81146;DP=2411;DP4=997,1390,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.67179e-07;MQSB=0.965247;RPB=0.667619;SGB=5.5382;VDB=0.451328;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.11:13048151 chr11:013048151 0 W/13048151-13048151 FN1173-S Single Base Substitution A-C INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN678-S.SNP.11:13049778 chr11:013049778 0 W/13049778-13049778 FN678-S Single Base Substitution C-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN1442-S.SNP.11:13054570 chr11:013054570 0 W/13054570-13054570 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3319-S.SNP.11:13059368 chr11:013059368 0 W/13059368-13059368 FN3319-S SNP A -> G AC=1;AN=184;BQB=0.995272;DP=3210;DP4=1517,1599,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.34141e-06;MQSB=0.999619;RPB=0.563297;SGB=13.188;VDB=0.761916;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.11:13063440 chr11:013063440 0 W/13063440-13063440 FN1173-S Single Base Substitution A-G INTRON HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN2494.SNP.11:13063908 chr11:013063908 0 W/13063908-13063908 FN2494 SNP G -> A AC=1;AN=200;BQB=0.390528;DP=4609;DP4=2096,2224,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216967;MQB=9.67824e-09;MQSB=0.971273;RPB=0.857495;SGB=26.8797;VDB=0.82346;EFF=INTRON(MODIFIER||||220|LOC_Os11g22700|protein_coding|CODING|LOC_Os11g22700.1|1|1) FN864-S.SNP.11:13069066 chr11:013069066 0 W/13069066-13069066 FN864-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN1480-S.SNP.11:13073011 chr11:013073011 0 W/13073011-13073011 FN1480-S Single Base Substitution G-C INTRON HET SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN3339-S.SNP.11:13073744 chr11:013073744 0 W/13073744-13073744 FN3339-S SNP G -> A AC=1;AN=184;BQB=0.67239;DP=3333;DP4=1767,1468,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000564863;MQSB=0.963165;RPB=0.989941;SGB=35.1773;VDB=0.814374;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A353V|710|LOC_Os11g22720|protein_coding|CODING|LOC_Os11g22720.1|3|1) FN1426-S.SNP.11:13075361 chr11:013075361 0 W/13075361-13075361 FN1426-S Single Base Substitution C-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN1633-S.SNP.11:13077015 chr11:013077015 0 W/13077015-13077015 FN1633-S Single Base Substitution A-C INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3791-S.SNP.11:13077350 chr11:013077350 0 W/13077350-13077350 FN3791-S SNP G -> A AC=1;AN=190;BQB=0.965337;DP=2819;DP4=1420,1317,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75232e-06;MQSB=0.700371;RPB=0.959434;SGB=39.9877;VDB=0.837034;EFF=INTRON(MODIFIER||||232|LOC_Os11g22730|protein_coding|CODING|LOC_Os11g22730.1|1|1) FN3316-S.SNP.11:13085224 chr11:013085224 0 W/13085224-13085224 FN3316-S SNP G -> A AC=2;AN=184;BQB=0.999994;DP=3631;DP4=1710,1800,19,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.81803e-21;MQSB=0.895159;RPB=0.868111;SGB=152.744;VDB=0.0560605;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T189I|713|LOC_Os11g22750|protein_coding|CODING|LOC_Os11g22750.1|2|1) FN1204-S.SNP.11:13086926 chr11:013086926 0 W/13086926-13086926 FN1204-S Single Base Substitution G-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1287-S.SNP.11:13090766 chr11:013090766 0 W/13090766-13090766 FN1287-S Single Base Substitution A-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3105-S.SNP.11:13102071 chr11:013102071 0 W/13102071-13102071 FN3105-S SNP G -> A AC=1;AN=184;BQB=0.957763;DP=3065;DP4=1656,1277,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.94143e-05;MQSB=0.998154;RPB=0.961073;SGB=21.6609;VDB=0.655561;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.11:13103164 chr11:013103164 0 W/13103164-13103164 FN3879-S SNP C -> A AC=1;AN=158;BQB=0.912936;DP=2637;DP4=1179,1387,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.90408e-08;MQSB=0.932773;RPB=0.662597;SGB=47.0672;VDB=0.859771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.11:13107484 chr11:013107484 0 W/13107484-13107484 FN-147 Single Base Substitution C-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2707-S.SNP.11:13110784 chr11:013110784 0 W/13110784-13110784 FN2707-S SNP C -> T AC=1;AN=200;BQB=0.982843;DP=4404;DP4=1937,2066,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.42505e-06;MQSB=0.265436;RPB=0.809184;SGB=36.6644;VDB=0.131805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.11:13116468 chr11:013116468 0 W/13116468-13116468 FN3909-S SNP G -> A AC=2;AN=158;BQB=0.666626;DP=2378;DP4=1102,1157,16,17;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00841043;MQB=1.09173e-09;MQSB=0.561868;RPB=0.985369;SGB=138.826;VDB=0.914921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.11:13117461 chr11:013117461 0 W/13117461-13117461 FN3415-S SNP T -> C AC=1;AN=184;BQB=0.936216;DP=3883;DP4=1700,2050,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0015452;MQB=0.00963436;MQSB=4.02664e-05;RPB=0.829484;SGB=30.6558;VDB=0.0456635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.11:13120415 chr11:013120415 0 W/13120415-13120415 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.7225;DP=1588;DP4=662,887,3,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2072e-05;MQSB=0.780437;RPB=0.72475;SGB=19.7539;VDB=0.82338;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.11:13125029 chr11:013125029 0 W/13125029-13125029 FN-215 Single Base Substitution T-C INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN-311.SNP.11:13125119 chr11:013125119 0 W/13125119-13125119 FN-311 Single Base Substitution C-T INTERGENIC HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN478-S.SNP.11:13129420 chr11:013129420 0 W/13129420-13129420 FN478-S Single Base Substitution C-T INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN706-S.SNP.11:13133227 chr11:013133227 0 W/13133227-13133227 FN706-S Single Base Substitution G-T INTRON HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN2703-S.SNP.11:13135299 chr11:013135299 0 W/13135299-13135299 FN2703-S SNP A -> G AC=1;AN=200;BQB=0.0210943;DP=4630;DP4=2111,2280,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000387045;MQSB=0.777743;RPB=0.992958;SGB=13.8539;VDB=0.041198;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N189|738|LOC_Os11g22840|protein_coding|CODING|LOC_Os11g22840.1|3|1) FN1204-S.SNP.11:13137422 chr11:013137422 0 W/13137422-13137422 FN1204-S Single Base Substitution C-A INTRON HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN780-S.SNP.11:13137422 chr11:013137422 0 W/13137422-13137422 FN780-S Single Base Substitution C-A INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN3966-S.SNP.11:13137958 chr11:013137958 0 W/13137958-13137958 FN3966-S SNP C -> T AC=1;AN=168;BQB=0.705976;DP=2529;DP4=1102,1345,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.4692e-06;MQSB=0.999848;RPB=0.00172922;SGB=21.0249;VDB=0.00676979;EFF=INTERGENIC(MODIFIER||||||||||1) FN-147.SNP.11:13142343 chr11:013142343 0 W/13142343-13142343 FN-147 Single Base Substitution T-G INTRON HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN-278.SNP.11:13143512 chr11:013143512 0 W/13143512-13143512 FN-278 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g22850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3559-S.SNP.11:13143695 chr11:013143695 0 W/13143695-13143695 FN3559-S SNP G -> A AC=1;AN=188;BQB=0.862893;DP=2595;DP4=1365,1165,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1196e-06;MQSB=0.955806;RPB=0.817958;SGB=48.979;VDB=0.996493;EFF=INTRON(MODIFIER||||884|LOC_Os11g22850|protein_coding|CODING|LOC_Os11g22850.1|7|1) FN3430-S.SNP.11:13145677 chr11:013145677 0 W/13145677-13145677 FN3430-S SNP A -> C AC=2;AN=184;BQB=0.996874;DP=2919;DP4=1458,1346,7,9;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0.0061665;MQB=3.65874e-05;MQSB=0.0203727;RPB=0.638266;SGB=66.8296;VDB=0.0761508;EFF=INTRON(MODIFIER||||884|LOC_Os11g22850|protein_coding|CODING|LOC_Os11g22850.1|7|1) FN4120-S.SNP.11:13160817 chr11:013160817 0 W/13160817-13160817 FN4120-S SNP C -> T AC=1;AN=182;BQB=0.961696;DP=3351;DP4=1780,1524,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000194964;MQSB=0.951271;RPB=0.763815;SGB=30.5793;VDB=0.585032;EFF=SPLICE_SITE_REGION(LOW||||235|LOC_Os11g22880|protein_coding|CODING|LOC_Os11g22880.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G67|235|LOC_Os11g22880|protein_coding|CODING|LOC_Os11g22880.1|2|1) FN1570-S.SNP.11:13162805 chr11:013162805 0 W/13162805-13162805 FN1570-S Single Base Substitution C-G INTERGENIC HET SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN3746-S.SNP.11:13167620 chr11:013167620 0 W/13167620-13167620 FN3746-S SNP G -> A AC=1;AN=190;BQB=0.830383;DP=2419;DP4=989,1345,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.26142e-06;MQSB=0.831706;RPB=0.978802;SGB=32.5467;VDB=0.931032;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.11:13169703 chr11:013169703 0 W/13169703-13169703 FN1080-S Single Base Substitution A-G INTERGENIC HOMO SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN_789-3-1.SNP.11:13169864 chr11:013169864 0 W/13169864-13169864 FN_789-3-1 Single Base Substitution G-C INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN_789-3-1.SNP.11:13169867 chr11:013169867 0 W/13169867-13169867 FN_789-3-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1372, Mutant_ID: FN_789-3-1, Generation: M3, Mutations: 87, Genes: 49, Seed availability: No. FN3581-S.SNP.11:13170693 chr11:013170693 0 W/13170693-13170693 FN3581-S SNP C -> T AC=1;AN=190;BQB=0.227084;DP=2738;DP4=1240,1389,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.5312e-06;MQSB=0.878699;RPB=0.626739;SGB=67.3108;VDB=0.57367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S123F|552|LOC_Os11g22910|protein_coding|CODING|LOC_Os11g22910.1|2|1) FN3730-S.SNP.11:13170954 chr11:013170954 0 W/13170954-13170954 FN3730-S SNP C -> T AC=1;AN=190;BQB=0.873806;DP=2662;DP4=1248,1312,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.90081e-13;MQSB=0.999998;RPB=0.999198;SGB=68.0854;VDB=0.939303;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A210V|552|LOC_Os11g22910|protein_coding|CODING|LOC_Os11g22910.1|2|1) FN2179-S.SNP.11:13172846 chr11:013172846 0 W/13172846-13172846 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.0191107;DP=3333;DP4=1631,1654,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.016424;MQSB=0.181297;RPB=0.847303;SGB=-42.3508;VDB=0.811727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.11:13172985 chr11:013172985 0 W/13172985-13172985 FN3666-S SNP C -> T AC=2;AN=190;BQB=0.997503;DP=3088;DP4=1488,1444,12,15;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.6491e-09;MQSB=0.941132;RPB=0.989632;SGB=85.8548;VDB=0.860616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.11:13175982 chr11:013175982 0 W/13175982-13175982 FN1039-S Single Base Substitution C-T INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN-168.SNP.11:13178547 chr11:013178547 0 W/13178547-13178547 FN-168 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g22920 retrotransposon protein, putative, unclassified, expressed SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN3517-S.SNP.11:13182313 chr11:013182313 0 W/13182313-13182313 FN3517-S SNP C -> T AC=2;AN=188;BQB=0.969356;DP=2802;DP4=1406,1319,8,13;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=1.0271e-08;MQSB=0.0670453;RPB=0.999963;SGB=64.3306;VDB=0.425731;EFF=INTRON(MODIFIER||||887|LOC_Os11g22930|protein_coding|CODING|LOC_Os11g22930.1|2|1) FN2178-S.SNP.11:13183940 chr11:013183940 0 W/13183940-13183940 FN2178-S SNP G -> T AC=2;AN=168;BQB=0.210516;DP=3261;DP4=1724,1449,20,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.34749e-17;MQSB=0.991786;RPB=0.517416;SGB=-311.428;VDB=0.477849;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E357*|887|LOC_Os11g22930|protein_coding|CODING|LOC_Os11g22930.1|4|1);LOF=(LOC_Os11g22930|LOC_Os11g22930|1|1.00);NMD=(LOC_Os11g22930|LOC_Os11g22930|1|1.00) FN1379-S.SNP.11:13191982 chr11:013191982 0 W/13191982-13191982 FN1379-S Single Base Substitution T-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN793-S.SNP.11:13192141 chr11:013192141 0 W/13192141-13192141 FN793-S Single Base Substitution G-A INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3552-S.SNP.11:13193757 chr11:013193757 0 W/13193757-13193757 FN3552-S SNP C -> A AC=2;AN=188;BQB=0.927088;DP=2878;DP4=1470,1348,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.40866e-16;MQSB=0.965997;RPB=0.738516;SGB=108.042;VDB=0.734836;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y52*|477|LOC_Os11g22950|protein_coding|CODING|LOC_Os11g22950.1|1|1);LOF=(LOC_Os11g22950|LOC_Os11g22950|1|1.00);NMD=(LOC_Os11g22950|LOC_Os11g22950|1|1.00) FN3552-S.SNP.11:13193758 chr11:013193758 0 W/13193758-13193758 FN3552-S SNP T -> A AC=2;AN=188;BQB=0.845558;DP=2867;DP4=1454,1287,12,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.11902e-17;MQSB=0.986463;RPB=0.828822;SGB=82.0471;VDB=0.747092;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgc/Agc|C53S|477|LOC_Os11g22950|protein_coding|CODING|LOC_Os11g22950.1|1|1) FN713-S.SNP.11:13194112 chr11:013194112 0 W/13194112-13194112 FN713-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g22950 retrotransposon, putative, centromere-specific, expressed SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN4221-S.SNP.11:13210736 chr11:013210736 0 W/13210736-13210736 FN4221-S SNP G -> T AC=1;AN=170;BQB=0.97812;DP=2329;DP4=1022,1178,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.49255e-05;MQSB=0.982031;RPB=0.727206;SGB=38.987;VDB=0.583965;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.11:13211395 chr11:013211395 0 W/13211395-13211395 FN632-S Single Base Substitution C-A INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1112-S.SNP.11:13213919 chr11:013213919 0 W/13213919-13213919 FN1112-S Single Base Substitution T-A INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3651-S.SNP.11:13214058 chr11:013214058 0 W/13214058-13214058 FN3651-S SNP A -> T AC=2;AN=190;BQB=0.71413;DP=3032;DP4=1271,1636,8,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.04286e-11;MQSB=0.861564;RPB=0.805186;SGB=108.296;VDB=0.0046997;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.11:13216975 chr11:013216975 0 W/13216975-13216975 FN3992-S SNP G -> T AC=1;AN=168;BQB=0.99871;DP=2733;DP4=1155,1436,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.7057e-08;MQSB=0.997474;RPB=0.656352;SGB=24.6155;VDB=0.478325;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.11:13221021 chr11:013221021 0 W/13221021-13221021 FN_N1-116-1 Single Base Substitution G-A HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2081-S.SNP.11:13229682 chr11:013229682 0 W/13229682-13229682 FN2081-S SNP C -> G AC=1;AN=168;BQB=0.990587;DP=3003;DP4=1732,1224,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.002331;MQB=2.02213e-08;MQSB=0.876778;RPB=0.682757;SGB=51.902;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.11:13234640 chr11:013234640 0 W/13234640-13234640 FN2313 SNP G -> A AC=2;AN=192;BQB=0.982512;DP=4800;DP4=2319,2178,29,17;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.00979167;MQB=2.63388e-07;MQSB=4.99284e-08;RPB=0.965465;SGB=153.839;VDB=0.0694196;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D743N|803|LOC_Os11g23010|protein_coding|CODING|LOC_Os11g23010.1|6|1) FN2646-S.SNP.11:13236547 chr11:013236547 0 W/13236547-13236547 FN2646-S SNP C -> A AC=1;AN=200;BQB=0.0498862;DP=3552;DP4=1762,1605,12,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00788288;MQB=2.49221e-07;MQSB=3.30256e-07;RPB=0.907924;SGB=61.9006;VDB=0.901409;EFF=INTERGENIC(MODIFIER||||||||||1) FN2104-S.SNP.11:13238637 chr11:013238637 0 W/13238637-13238637 FN2104-S SNP G -> A AC=2;AN=168;BQB=0.912602;DP=2372;DP4=1054,1284,4,4;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0029511;MQB=0.00172277;MQSB=0.296142;RPB=0.957381;SGB=30.0193;VDB=0.585032;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aAc|S363N|846|LOC_Os11g23020|protein_coding|CODING|LOC_Os11g23020.1|2|1) FN2104-S.SNP.11:13238638 chr11:013238638 0 W/13238638-13238638 FN2104-S SNP C -> A AC=2;AN=168;BQB=0.999683;DP=2383;DP4=1055,1287,6,4;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.00293747;MQB=0.000367724;MQSB=0.324946;RPB=0.894386;SGB=10.0307;VDB=0.474122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S363R|846|LOC_Os11g23020|protein_coding|CODING|LOC_Os11g23020.1|2|1) FN631-S.SNP.11:13238675 chr11:013238675 0 W/13238675-13238675 FN631-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g23020 transposon protein, putative, CACTA, En/Spm sub-class SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2237-S.SNP.11:13242322 chr11:013242322 0 W/13242322-13242322 FN2237-S SNP C -> G AC=1;AN=190;BQB=0.800355;DP=4330;DP4=2188,1958,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000240202;MQSB=0.955581;RPB=0.699551;SGB=28.9929;VDB=0.0165932;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G30R|78|LOC_Os11g23030|protein_coding|CODING|LOC_Os11g23030.1|1|1) FN1293-S.SNP.11:13254405 chr11:013254405 0 W/13254405-13254405 FN1293-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g23050 expressed protein SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1561-S.SNP.11:13256182 chr11:013256182 0 W/13256182-13256182 FN1561-S Single Base Substitution G-A INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3976-S.SNP.11:13258388 chr11:013258388 0 W/13258388-13258388 FN3976-S SNP A -> G AC=1;AN=168;BQB=0.692235;DP=2528;DP4=1140,1259,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.19144e-11;MQSB=0.911691;RPB=0.39825;SGB=34.3388;VDB=0.679082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.11:13259231 chr11:013259231 0 W/13259231-13259231 FN2091-S SNP C -> T AC=1;AN=168;BQB=0.198941;DP=3841;DP4=1897,1896,18,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00260349;MQB=9.91898e-10;MQSB=0.997069;RPB=0.515933;SGB=-103.201;VDB=0.363977;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.11:13265586 chr11:013265586 0 W/13265586-13265586 FN1708-S SNP G -> T AC=1;AN=188;BQB=0.0555209;DP=4185;DP4=2167,1989,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.0187998;MQSB=0.914539;RPB=0.908458;SGB=-88.8972;VDB=0.56986;EFF=INTRON(MODIFIER||||938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|5|1) FN2596-S.SNP.11:13266388 chr11:013266388 0 W/13266388-13266388 FN2596-S SNP A -> G AC=2;AN=198;BQB=0.943457;DP=4224;DP4=2021,2011,27,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.82374e-25;MQSB=0.998941;RPB=0.714664;SGB=214.973;VDB=0.656342;EFF=INTRON(MODIFIER||||938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|6|1) FN2360.SNP.11:13266692 chr11:013266692 0 W/13266692-13266692 FN2360 SNP G -> T AC=1;AN=192;BQB=0.621056;DP=4810;DP4=2255,2317,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.36363e-12;MQSB=0.869037;RPB=0.999882;SGB=64.7304;VDB=0.974184;EFF=INTRON(MODIFIER||||938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|6|1) FN2536-S.SNP.11:13268182 chr11:013268182 0 W/13268182-13268182 FN2536-S SNP G -> A AC=1;AN=198;BQB=0.671599;DP=4242;DP4=1977,2032,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.69189e-06;MQSB=0.843772;RPB=0.68707;SGB=16.3688;VDB=0.551461;EFF=INTRON(MODIFIER||||938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|8|1) FN2417.SNP.11:13269437 chr11:013269437 0 W/13269437-13269437 FN2417 SNP G -> A AC=1;AN=200;BQB=0.855833;DP=5048;DP4=2340,2392,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78175e-12;MQSB=0.905783;RPB=0.919973;SGB=19.1209;VDB=0.200574;EFF=INTRON(MODIFIER||||938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|10|1) FN2378.SNP.11:13270680 chr11:013270680 0 W/13270680-13270680 FN2378 SNP C -> T AC=1;AN=192;BQB=0.389102;DP=4450;DP4=2165,2009,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.08646e-11;MQSB=0.0781208;RPB=0.386806;SGB=108.547;VDB=0.469158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P908L|938|LOC_Os11g23060|protein_coding|CODING|LOC_Os11g23060.1|13|1) FN3550-S.SNP.11:13275298 chr11:013275298 0 W/13275298-13275298 FN3550-S SNP C -> T AC=1;AN=188;BQB=0.757335;DP=2946;DP4=1233,1620,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00271555;MQB=0.00123559;MQSB=0.475032;RPB=0.934745;SGB=48.979;VDB=0.87837;EFF=INTRON(MODIFIER||||267|LOC_Os11g23070|protein_coding|CODING|LOC_Os11g23070.1|1|1) FN3837-S.SNP.11:13275437 chr11:013275437 0 W/13275437-13275437 FN3837-S SNP C -> A AC=2;AN=190;BQB=0.923813;DP=3039;DP4=1295,1465,13,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000329056;MQB=3.50081e-10;MQSB=0.356766;RPB=0.865237;SGB=67.0756;VDB=0.842279;EFF=INTRON(MODIFIER||||267|LOC_Os11g23070|protein_coding|CODING|LOC_Os11g23070.1|1|1) FN-359.SNP.11:13275765 chr11:013275765 0 W/13275765-13275765 FN-359 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 348, Mutant_ID: FN-359, Generation: M2, Mutations: 40, Genes: 12, Seed availability: Yes. FN-92.SNP.11:13285036 chr11:013285036 0 W/13285036-13285036 FN-92 Single Base Substitution A-G INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN-188.SNP.11:13285391 chr11:013285391 0 W/13285391-13285391 FN-188 Single Base Substitution G-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1039-S.SNP.11:13287561 chr11:013287561 0 W/13287561-13287561 FN1039-S Single Base Substitution G-T INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN4122-S.SNP.11:13293507 chr11:013293507 0 W/13293507-13293507 FN4122-S SNP C -> G AC=2;AN=182;BQB=0.95933;DP=3221;DP4=1523,1578,16,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.40305e-21;MQSB=0.99998;RPB=0.998871;SGB=138.839;VDB=0.470209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Ccg|A1601P|1731|LOC_Os11g23100|protein_coding|CODING|LOC_Os11g23100.1|6|1) FN4122-S.SNP.11:13293508 chr11:013293508 0 W/13293508-13293508 FN4122-S SNP T -> C AC=2;AN=182;BQB=0.844978;DP=3239;DP4=1522,1610,16,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.65739e-22;MQSB=0.999971;RPB=0.990422;SGB=70.8504;VDB=0.631193;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K1600|1731|LOC_Os11g23100|protein_coding|CODING|LOC_Os11g23100.1|6|1) FN3375-S.SNP.11:13294811 chr11:013294811 0 W/13294811-13294811 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.921099;DP=2919;DP4=1362,1456,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28524e-06;MQSB=0.786214;RPB=0.320929;SGB=39.699;VDB=0.117011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P1184L|1731|LOC_Os11g23100|protein_coding|CODING|LOC_Os11g23100.1|5|1) FN2086-S.SNP.11:13295729 chr11:013295729 0 W/13295729-13295729 FN2086-S SNP C -> G AC=2;AN=168;BQB=0.981357;DP=3231;DP4=1536,1627,28,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.51546e-25;MQSB=0.966962;RPB=0.908167;SGB=-59.4263;VDB=0.844001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V993L|1731|LOC_Os11g23100|protein_coding|CODING|LOC_Os11g23100.1|4|1),SPLICE_SITE_REGION(LOW||||1731|LOC_Os11g23100|protein_coding|CODING|LOC_Os11g23100.1|4|1) FN3509-S.SNP.11:13301366 chr11:013301366 0 W/13301366-13301366 FN3509-S SNP T -> G AC=2;AN=188;BQB=0.650407;DP=2725;DP4=1243,1389,11,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.73259e-08;MQSB=0.983652;RPB=0.985128;SGB=33.7061;VDB=0.662175;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.11:13302835 chr11:013302835 0 W/13302835-13302835 FN-156 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g23110 retrotransposon, putative, centromere-specific, expressed SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN3339-S.SNP.11:13303999 chr11:013303999 0 W/13303999-13303999 FN3339-S SNP A -> T AC=1;AN=184;BQB=0.323152;DP=3263;DP4=1359,1652,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00143598;MQSB=0.932876;RPB=0.978988;SGB=10.6662;VDB=0.751563;EFF=INTERGENIC(MODIFIER||||||||||1) FN4031-S.SNP.11:13305416 chr11:013305416 0 W/13305416-13305416 FN4031-S SNP A -> T AC=1;AN=168;BQB=0.938305;DP=2961;DP4=1289,1380,14,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.64289e-13;MQSB=0.906053;RPB=0.0708579;SGB=17.068;VDB=0.625154;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.11:13307981 chr11:013307981 0 W/13307981-13307981 FN2792-S SNP G -> A AC=1;AN=198;BQB=0.980084;DP=4079;DP4=2107,1765,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04748e-06;MQSB=0.985343;RPB=0.754398;SGB=25.7687;VDB=0.522432;EFF=INTRON(MODIFIER||||288|LOC_Os11g23120|protein_coding|CODING|LOC_Os11g23120.1|2|1) FN2608-S.SNP.11:13313335 chr11:013313335 0 W/13313335-13313335 FN2608-S SNP A -> G AC=1;AN=198;BQB=0.50277;DP=4162;DP4=1937,2032,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000240269;MQB=6.33866e-05;MQSB=0.990349;RPB=0.570081;SGB=26.5745;VDB=0.808291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.11:13316016 chr11:013316016 0 W/13316016-13316016 FN2108-S SNP G -> C AC=2;AN=168;BQB=0.725016;DP=2845;DP4=1401,1372,24,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00492091;MQB=6.8447e-17;MQSB=0.999624;RPB=0.915165;SGB=-50.3194;VDB=0.000151536;EFF=UTR_5_PRIME(MODIFIER||333||1118|LOC_Os11g23140|protein_coding|CODING|LOC_Os11g23140.1|3|1) FN3939-S.SNP.11:13316678 chr11:013316678 0 W/13316678-13316678 FN3939-S SNP C -> T AC=1;AN=158;BQB=0.926377;DP=2913;DP4=1456,1353,8,10;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00240302;MQB=1.60134e-10;MQSB=0.38115;RPB=0.697771;SGB=28.5576;VDB=0.392804;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V70|1118|LOC_Os11g23140|protein_coding|CODING|LOC_Os11g23140.1|4|1) FN2424.SNP.11:13319468 chr11:013319468 0 W/13319468-13319468 FN2424 SNP C -> T AC=2;AN=200;BQB=0.930873;DP=4229;DP4=1868,2107,16,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000236463;MQB=5.61396e-16;MQSB=0.9333;RPB=0.959092;SGB=81.5883;VDB=0.563754;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I834|1118|LOC_Os11g23140|protein_coding|CODING|LOC_Os11g23140.1|8|1) FN2465.SNP.11:13319636 chr11:013319636 0 W/13319636-13319636 FN2465 SNP C -> A AC=1;AN=200;BQB=0.997145;DP=4204;DP4=2123,1839,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55532e-13;MQSB=0.800444;RPB=0.499523;SGB=47.7211;VDB=0.427807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S890R|1118|LOC_Os11g23140|protein_coding|CODING|LOC_Os11g23140.1|8|1) FN3967-S.SNP.11:13322619 chr11:013322619 0 W/13322619-13322619 FN3967-S SNP T -> G AC=1;AN=182;BQB=0.99962;DP=3295;DP4=1575,1612,4,11;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.0212443;MQB=0.912517;MQSB=5.66004e-13;RPB=0.392403;SGB=62.1548;VDB=0.187135;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.11:13323425 chr11:013323425 0 W/13323425-13323425 FN-233 Single Base Substitution G-C INTERGENIC HOMO SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN2401.SNP.11:13324418 chr11:013324418 0 W/13324418-13324418 FN2401 SNP C -> T AC=2;AN=200;BQB=0.542771;DP=4283;DP4=2031,1928,26,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.34217e-22;MQSB=0.974508;RPB=0.00564783;SGB=180.871;VDB=0.303562;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L139|287|LOC_Os11g23150|protein_coding|CODING|LOC_Os11g23150.1|1|1) FN751-S.SNP.11:13326191 chr11:013326191 0 W/13326191-13326191 FN751-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN2640-S.SNP.11:13326442 chr11:013326442 0 W/13326442-13326442 FN2640-S SNP C -> A AC=1;AN=200;BQB=0.725096;DP=4495;DP4=1936,2238,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.51397e-13;MQSB=0.522564;RPB=0.73966;SGB=65.5058;VDB=0.237235;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A208S|460|LOC_Os11g23160|protein_coding|CODING|LOC_Os11g23160.1|5|1) FN545-S.SNP.11:13331024 chr11:013331024 0 W/13331024-13331024 FN545-S Single Base Substitution G-A INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN874-S.SNP.11:13331718 chr11:013331718 0 W/13331718-13331718 FN874-S Single Base Substitution A-G INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN3630-S.SNP.11:13335746 chr11:013335746 0 W/13335746-13335746 FN3630-S SNP G -> A AC=2;AN=190;BQB=0.999145;DP=2680;DP4=1362,1177,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.30934e-11;MQSB=0.908866;RPB=0.790108;SGB=90.0802;VDB=0.133323;EFF=INTRON(MODIFIER||||311|LOC_Os11g23170|protein_coding|CODING|LOC_Os11g23170.1|3|1),INTRON(MODIFIER||||310|LOC_Os11g23170|protein_coding|CODING|LOC_Os11g23170.2|3|1),INTRON(MODIFIER||||306|LOC_Os11g23170|protein_coding|CODING|LOC_Os11g23170.3|3|1) FN480-S.SNP.11:13336765 chr11:013336765 0 W/13336765-13336765 FN480-S Single Base Substitution C-T INTRON HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN1660-S.SNP.11:13346466 chr11:013346466 0 W/13346466-13346466 FN1660-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g23180 hypothetical protein SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN3412-S.SNP.11:13348495 chr11:013348495 0 W/13348495-13348495 FN3412-S SNP G -> T AC=2;AN=184;BQB=0.578105;DP=2788;DP4=1246,1395,14,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.38704e-12;MQSB=0.986197;RPB=0.504548;SGB=125.613;VDB=0.932034;EFF=INTERGENIC(MODIFIER||||||||||1) FN803-S.SNP.11:13350542 chr11:013350542 0 W/13350542-13350542 FN803-S Single Base Substitution G-A INTERGENIC HET SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN1661-S.SNP.11:13352749 chr11:013352749 0 W/13352749-13352749 FN1661-S Single Base Substitution C-G INTERGENIC HET SNo: 1361, Mutant_ID: FN1661-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN957-S.SNP.11:13354582 chr11:013354582 0 W/13354582-13354582 FN957-S Single Base Substitution C-A INTRON HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2213-S.SNP.11:13360856 chr11:013360856 0 W/13360856-13360856 FN2213-S SNP G -> A AC=1;AN=190;BQB=0.903948;DP=5303;DP4=2393,2491,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.74116e-06;MQSB=0.685794;RPB=0.38704;SGB=-15.4375;VDB=0.572021;EFF=INTERGENIC(MODIFIER||||||||||1) FN4101-S.SNP.11:13360905 chr11:013360905 0 W/13360905-13360905 FN4101-S SNP G -> C AC=1;AN=182;BQB=0.978564;DP=3222;DP4=1408,1707,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.70854e-06;MQSB=0.95475;RPB=0.971996;SGB=21.5845;VDB=0.99135;EFF=INTERGENIC(MODIFIER||||||||||1) FN3804-S.SNP.11:13363512 chr11:013363512 0 W/13363512-13363512 FN3804-S SNP G -> C AC=1;AN=190;BQB=0.802994;DP=2421;DP4=1256,1075,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28657e-08;MQSB=0.941797;RPB=0.941627;SGB=53.6492;VDB=0.100009;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A60G|125|LOC_Os11g23210|protein_coding|CODING|LOC_Os11g23210.1|2|1) FN2681-S.SNP.11:13364323 chr11:013364323 0 W/13364323-13364323 FN2681-S SNP T -> C AC=1;AN=200;BQB=0.990428;DP=5054;DP4=2438,2417,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34147e-15;MQSB=0.323258;RPB=0.995531;SGB=127.947;VDB=0.887674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3552-S.SNP.11:13365102 chr11:013365102 0 W/13365102-13365102 FN3552-S SNP T -> C AC=2;AN=188;BQB=0.544738;DP=3290;DP4=1444,1690,16,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.15495e-11;MQSB=0.157686;RPB=0.762696;SGB=56.5957;VDB=0.225224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.11:13365779 chr11:013365779 0 W/13365779-13365779 FN2134-S SNP C -> T AC=1;AN=168;BQB=0.263657;DP=3743;DP4=1772,1916,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.58126e-11;MQSB=0.999905;RPB=0.996526;SGB=-44.6276;VDB=0.756327;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.11:13367542 chr11:013367542 0 W/13367542-13367542 FN548-S Single Base Substitution C-T INTERGENIC HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN3425-S.SNP.11:13369486 chr11:013369486 0 W/13369486-13369486 FN3425-S SNP T -> G AC=1;AN=184;BQB=0.990881;DP=2967;DP4=1247,1451,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.58559e-08;MQSB=0.922204;RPB=0.163931;SGB=23.2751;VDB=0.172728;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.11:13370579 chr11:013370579 0 W/13370579-13370579 FN-195 Single Base Substitution C-T INTERGENIC HOMO SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN773-S.SNP.11:13380469 chr11:013380469 0 W/13380469-13380469 FN773-S Single Base Substitution C-T INTERGENIC HOMO SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN4150-S.SNP.11:13385860 chr11:013385860 0 W/13385860-13385860 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.698572;DP=2513;DP4=1000,1439,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.04125e-06;MQSB=0.830066;RPB=0.980084;SGB=29.6545;VDB=0.834857;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T180I|890|LOC_Os11g23230|protein_coding|CODING|LOC_Os11g23230.1|2|1) FN2139-S.SNP.11:13386059 chr11:013386059 0 W/13386059-13386059 FN2139-S SNP G -> A AC=1;AN=168;BQB=0.804499;DP=2740;DP4=1206,1466,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.62927e-07;MQSB=0.756651;RPB=0.95866;SGB=19.7539;VDB=0.763609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L114F|890|LOC_Os11g23230|protein_coding|CODING|LOC_Os11g23230.1|2|1) FN3542-S.SNP.11:13388055 chr11:013388055 0 W/13388055-13388055 FN3542-S SNP C -> T AC=1;AN=188;BQB=0.988831;DP=2731;DP4=864,1805,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=1.49425e-05;MQSB=0.000617915;RPB=0.880718;SGB=15.903;VDB=0.158054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.11:13390417 chr11:013390417 0 W/13390417-13390417 FN1761-S SNP A -> G AC=2;AN=188;BQB=0.00536477;DP=2665;DP4=1456,1097,17,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.42065e-08;MQSB=5.90092e-06;RPB=0.261448;SGB=-236.246;VDB=0.00683959;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.11:13392434 chr11:013392434 0 W/13392434-13392434 FN680-S Single Base Substitution G-A INTRON HOMO SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN3452-S.SNP.11:13393820 chr11:013393820 0 W/13393820-13393820 FN3452-S SNP A -> G AC=2;AN=184;BQB=0.9733;DP=2949;DP4=1514,1339,13,14;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=3.96517e-08;MQSB=0.956894;RPB=0.960432;SGB=85.0529;VDB=0.505628;EFF=INTRON(MODIFIER||||243|LOC_Os11g23234|protein_coding|CODING|LOC_Os11g23234.1|1|1) FN3708-S.SNP.11:13398814 chr11:013398814 0 W/13398814-13398814 FN3708-S SNP C -> A AC=1;AN=190;BQB=0.971613;DP=3025;DP4=1441,1494,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.59799e-05;MQSB=0.994512;RPB=0.772262;SGB=30.8803;VDB=0.933643;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S265*|651|LOC_Os11g23236|protein_coding|CODING|LOC_Os11g23236.1|4|1);LOF=(LOC_Os11g23236|LOC_Os11g23236|1|1.00);NMD=(LOC_Os11g23236|LOC_Os11g23236|1|1.00) FN4224-S.SNP.11:13402199 chr11:013402199 0 W/13402199-13402199 FN4224-S SNP C -> G AC=1;AN=170;BQB=0.962003;DP=1969;DP4=1186,726,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.000507872;MQB=0.073994;MQSB=0;RPB=0.994196;SGB=47.8722;VDB=0.283895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K63N|343|LOC_Os11g23238|protein_coding|CODING|LOC_Os11g23238.1|1|1) FN707-S.SNP.11:13405182 chr11:013405182 0 W/13405182-13405182 FN707-S Single Base Substitution T-A INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN2487.SNP.11:13416361 chr11:013416361 0 W/13416361-13416361 FN2487 SNP G -> A AC=1;AN=200;BQB=0.612981;DP=4574;DP4=2567,1775,12,18;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.07292e-15;MQSB=0.428812;RPB=0.428197;SGB=132.552;VDB=0.012743;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.11:13416717 chr11:013416717 0 W/13416717-13416717 FN3342-S SNP G -> T AC=1;AN=184;BQB=0.468623;DP=3726;DP4=1635,1959,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26993e-08;MQSB=0.983524;RPB=0.0084743;SGB=33.3622;VDB=0.115575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.11:13418825 chr11:013418825 0 W/13418825-13418825 FN3372-S SNP A -> G AC=1;AN=184;BQB=0.9163;DP=3092;DP4=1700,1207,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=1.25312e-08;MQSB=0.200882;RPB=0.510852;SGB=53.3568;VDB=0.188816;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T9A|155|LOC_Os11g23740|protein_coding|CODING|LOC_Os11g23740.1|1|1) FN4110-S.SNP.11:13423572 chr11:013423572 0 W/13423572-13423572 FN4110-S SNP T -> C AC=1;AN=182;BQB=0.605134;DP=3038;DP4=1415,1522,12,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.24651e-14;MQSB=0.882543;RPB=0.54499;SGB=95.3123;VDB=0.269996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.11:13426489 chr11:013426489 0 W/13426489-13426489 FN1034-S Single Base Substitution G-A INTRON HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN-131.SNP.11:13428275 chr11:013428275 0 W/13428275-13428275 FN-131 Single Base Substitution T-A INTRON HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN4150-S.SNP.11:13429686 chr11:013429686 0 W/13429686-13429686 FN4150-S SNP A -> G AC=1;AN=170;BQB=0.990181;DP=2543;DP4=1173,1309,13,4;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0110106;MQB=8.42858e-07;MQSB=0.54772;RPB=0.946943;SGB=70.0854;VDB=0.0134151;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L418|938|LOC_Os11g23750|protein_coding|CODING|LOC_Os11g23750.1|5|1) FN4050-S.SNP.11:13431771 chr11:013431771 0 W/13431771-13431771 FN4050-S SNP C -> T AC=1;AN=168;BQB=0.942769;DP=2694;DP4=1318,1277,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00371195;MQB=1.01208e-10;MQSB=0.340062;RPB=0.899634;SGB=72.4869;VDB=0.874392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S895L|938|LOC_Os11g23750|protein_coding|CODING|LOC_Os11g23750.1|8|1) FN2372.SNP.11:13432045 chr11:013432045 0 W/13432045-13432045 FN2372 SNP T -> C AC=1;AN=192;BQB=0.541034;DP=5089;DP4=2531,2228,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000786009;MQB=2.80652e-13;MQSB=0.131945;RPB=0.928139;SGB=89.6809;VDB=0.741227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.11:13433366 chr11:013433366 0 W/13433366-13433366 FN2116-S SNP T -> A AC=2;AN=168;BQB=0.924442;DP=3271;DP4=1307,1887,25,39;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0.000611434;MQB=7.0499e-12;MQSB=0.957605;RPB=0.0867375;SGB=127.059;VDB=0.508617;EFF=INTERGENIC(MODIFIER||||||||||1) FN1272-S.SNP.11:13437945 chr11:013437945 0 W/13437945-13437945 FN1272-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g23760 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN811-S.SNP.11:13437986 chr11:013437986 0 W/13437986-13437986 FN811-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g23760 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN4087-S.SNP.11:13443580 chr11:013443580 0 W/13443580-13443580 FN4087-S SNP G -> T AC=1;AN=182;BQB=0.426355;DP=3546;DP4=1734,1721,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.95434e-07;MQSB=0.420174;RPB=0.7093;SGB=42.6494;VDB=0.490472;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R194M|210|LOC_Os11g23770|protein_coding|CODING|LOC_Os11g23770.1|2|1),UTR_3_PRIME(MODIFIER||121||185|LOC_Os11g23770|protein_coding|CODING|LOC_Os11g23770.2|1|1) FN3951-S.SNP.11:13448568 chr11:013448568 0 W/13448568-13448568 FN3951-S SNP G -> T AC=1;AN=168;BQB=0.999262;DP=1795;DP4=571,1134,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.05403e-05;MQSB=0.152026;RPB=0.528855;SGB=24.4556;VDB=0.477568;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.11:13451842 chr11:013451842 0 W/13451842-13451842 FN742-S Single Base Substitution C-A INTRON HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2789-S.SNP.11:13454104 chr11:013454104 0 W/13454104-13454104 FN2789-S SNP A -> G AC=1;AN=198;BQB=0.0557015;DP=4256;DP4=1982,2075,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234962;MQB=2.16698e-06;MQSB=0.0121482;RPB=0.952756;SGB=18.9639;VDB=0.408663;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.11:13460725 chr11:013460725 0 W/13460725-13460725 FN633-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN2332.SNP.11:13463650 chr11:013463650 0 W/13463650-13463650 FN2332 SNP C -> A AC=1;AN=192;BQB=0.508293;DP=5028;DP4=2211,2475,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=3.66917e-13;MQSB=0.570155;RPB=0.318624;SGB=24.5626;VDB=0.343742;EFF=INTRON(MODIFIER||||382|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.1|2|1),INTRON(MODIFIER||||382|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.2|2|1),INTRON(MODIFIER||||363|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.3|2|1) FN3546-S.SNP.11:13463650 chr11:013463650 0 W/13463650-13463650 FN3546-S SNP C -> A AC=2;AN=188;BQB=0.988675;DP=2567;DP4=1147,1334,7,8;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=2.64541e-07;MQSB=3.36656e-06;RPB=0.6361;SGB=62.6088;VDB=0.903899;EFF=INTRON(MODIFIER||||382|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.1|2|1),INTRON(MODIFIER||||382|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.2|2|1),INTRON(MODIFIER||||363|LOC_Os11g23790|protein_coding|CODING|LOC_Os11g23790.3|2|1) FN2529-S.SNP.11:13469621 chr11:013469621 0 W/13469621-13469621 FN2529-S SNP A -> C AC=1;AN=198;BQB=0.712507;DP=4717;DP4=2206,2282,9,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.06749e-10;MQSB=0.856181;RPB=0.861328;SGB=67.9293;VDB=0.316359;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atC|I26|124|LOC_Os11g23800|protein_coding|CODING|LOC_Os11g23800.1|1|1) FN3477-S.SNP.11:13470030 chr11:013470030 0 W/13470030-13470030 FN3477-S SNP T -> A AC=1;AN=184;BQB=0.999997;DP=2666;DP4=1212,1338,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00187547;MQB=5.25787e-07;MQSB=0.897001;RPB=0.972891;SGB=62.3078;VDB=0.977203;EFF=INTRON(MODIFIER||||124|LOC_Os11g23800|protein_coding|CODING|LOC_Os11g23800.1|1|1) FN1513-S.SNP.11:13471058 chr11:013471058 0 W/13471058-13471058 FN1513-S Single Base Substitution A-C INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN3817-S.SNP.11:13474347 chr11:013474347 0 W/13474347-13474347 FN3817-S SNP A -> G AC=1;AN=190;BQB=0.991439;DP=2500;DP4=1226,1107,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.32388e-08;MQSB=0.472807;RPB=0.589265;SGB=39.6545;VDB=0.822094;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.11:13476267 chr11:013476267 0 W/13476267-13476267 FN1662-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2701-S.SNP.11:13477973 chr11:013477973 0 W/13477973-13477973 FN2701-S SNP G -> C AC=2;AN=200;BQB=0.752383;DP=4662;DP4=2109,2282,12,13;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.00943801;MQB=0.395506;MQSB=3.87781e-05;RPB=0.400435;SGB=79.9264;VDB=0.250954;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agG|S211R|873|LOC_Os11g23810|protein_coding|CODING|LOC_Os11g23810.1|4|1) FN3417-S.SNP.11:13483178 chr11:013483178 0 W/13483178-13483178 FN3417-S SNP T -> C AC=2;AN=184;BQB=0.991454;DP=2710;DP4=1332,1267,15,12;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00110701;MQB=1.36462e-09;MQSB=0.827039;RPB=0.758672;SGB=85.0529;VDB=0.77076;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I576M|1048|LOC_Os11g23820|protein_coding|CODING|LOC_Os11g23820.1|2|1) FN3490-S.SNP.11:13486782 chr11:013486782 0 W/13486782-13486782 FN3490-S SNP C -> T AC=2;AN=184;BQB=0.266678;DP=2748;DP4=1369,1295,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.8627e-12;MQSB=0.997699;RPB=0.702458;SGB=116.569;VDB=0.411635;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L265|562|LOC_Os11g23830|protein_coding|CODING|LOC_Os11g23830.1|4|1) FN946-S.SNP.11:13489648 chr11:013489648 0 W/13489648-13489648 FN946-S Single Base Substitution T-C INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2488.SNP.11:13496192 chr11:013496192 0 W/13496192-13496192 FN2488 SNP G -> A AC=1;AN=200;BQB=0.948939;DP=4894;DP4=2374,2303,15,14;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.79792e-13;MQSB=0.00470364;RPB=0.812313;SGB=60.747;VDB=0.198207;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.11:13496214 chr11:013496214 0 W/13496214-13496214 FN2463 SNP T -> A AC=1;AN=200;BQB=0.950254;DP=4910;DP4=2366,2196,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.51196e-13;MQSB=0.074388;RPB=0.952775;SGB=20.7261;VDB=0.7615;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.11:13496215 chr11:013496215 0 W/13496215-13496215 FN2463 SNP T -> A AC=1;AN=200;BQB=0.631006;DP=4911;DP4=2350,2212,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.6195e-14;MQSB=0.0904038;RPB=0.996028;SGB=95.7111;VDB=0.890759;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.11:13497858 chr11:013497858 0 W/13497858-13497858 FN1344-S Single Base Substitution C-T INTRON HOMO SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3475-S.SNP.11:13498829 chr11:013498829 0 W/13498829-13498829 FN3475-S SNP T -> C AC=1;AN=184;BQB=0.847473;DP=3281;DP4=1435,1751,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00060957;MQB=0.0058749;MQSB=0.8803;RPB=0.999912;SGB=18.2315;VDB=0.0532145;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.11:13499617 chr11:013499617 0 W/13499617-13499617 FN1086-S Single Base Substitution G-A INTERGENIC HET SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2439.SNP.11:13499909 chr11:013499909 0 W/13499909-13499909 FN2439 SNP A -> G AC=2;AN=200;BQB=0.820703;DP=3982;DP4=1723,1863,6,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32986e-07;MQSB=0.6057;RPB=0.92356;SGB=34.6953;VDB=0.931215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.11:13504389 chr11:013504389 0 W/13504389-13504389 FN2092-S SNP A -> T AC=1;AN=168;BQB=0.975005;DP=4226;DP4=2136,2051,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.25821e-14;MQSB=0.999977;RPB=0.329794;SGB=46.4929;VDB=0.433902;EFF=INTERGENIC(MODIFIER||||||||||1) FN1640-S.SNP.11:13504532 chr11:013504532 0 W/13504532-13504532 FN1640-S Single Base Substitution T-C INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1640-S.SNP.11:13504537 chr11:013504537 0 W/13504537-13504537 FN1640-S Single Base Substitution T-G INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1274-S.SNP.11:13506025 chr11:013506025 0 W/13506025-13506025 FN1274-S Single Base Substitution A-T INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN1031-S.SNP.11:13507536 chr11:013507536 0 W/13507536-13507536 FN1031-S Single Base Substitution A-G INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4230-S.SNP.11:13508465 chr11:013508465 0 W/13508465-13508465 FN4230-S SNP C -> G AC=1;AN=170;BQB=0.803217;DP=2276;DP4=739,1336,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.30504e-06;MQSB=0.982653;RPB=0.805133;SGB=34.5445;VDB=0.310568;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.11:13516990 chr11:013516990 0 W/13516990-13516990 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.933795;DP=2463;DP4=1196,1181,8,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.70125e-07;MQSB=0.996998;RPB=0.55739;SGB=38.987;VDB=0.237602;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G594D|1205|LOC_Os11g23870|protein_coding|CODING|LOC_Os11g23870.1|4|1) FN3694-S.SNP.11:13519591 chr11:013519591 0 W/13519591-13519591 FN3694-S SNP C -> T AC=1;AN=190;BQB=0.99367;DP=2482;DP4=1021,1385,2,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00150993;MQSB=0.0719434;RPB=0.75012;SGB=21.7749;VDB=0.883498;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.11:13527008 chr11:013527008 0 W/13527008-13527008 FN-278 Single Base Substitution G-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3306-S.SNP.11:13529801 chr11:013529801 0 W/13529801-13529801 FN3306-S SNP G -> A AC=1;AN=184;BQB=0.940042;DP=3384;DP4=1726,1536,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00147754;MQB=3.41139e-09;MQSB=0.88734;RPB=0.721163;SGB=66.8296;VDB=0.619247;EFF=INTERGENIC(MODIFIER||||||||||1) FN811-S.SNP.11:13530482 chr11:013530482 0 W/13530482-13530482 FN811-S Single Base Substitution G-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN_822-5-1.SNP.11:13533938 chr11:013533938 0 W/13533938-13533938 FN_822-5-1 Single Base Substitution T-C HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1446-S.SNP.11:13540695 chr11:013540695 0 W/13540695-13540695 FN1446-S Single Base Substitution C-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1723-S.SNP.11:13552294 chr11:013552294 0 W/13552294-13552294 FN1723-S SNP G -> A AC=1;AN=186;BQB=4.57115e-05;DP=3398;DP4=1591,1743,22,18;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.04023e-11;MQSB=0.989124;RPB=0.784941;SGB=-402.802;VDB=0.55018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.11:13555254 chr11:013555254 0 W/13555254-13555254 FN1269-S Single Base Substitution T-G INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN3398-S.SNP.11:13563925 chr11:013563925 0 W/13563925-13563925 FN3398-S SNP G -> A AC=1;AN=184;BQB=0.992499;DP=3094;DP4=1513,1522,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.04215e-08;MQSB=0.965825;RPB=0.142956;SGB=62.3078;VDB=0.140165;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L57|388|LOC_Os11g23940|protein_coding|CODING|LOC_Os11g23940.1|1|1) FN2482.SNP.11:13568653 chr11:013568653 0 W/13568653-13568653 FN2482 SNP C -> T AC=2;AN=200;BQB=0.998941;DP=4182;DP4=2123,1782,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.78566e-12;MQSB=0.966876;RPB=0.898252;SGB=52.9314;VDB=0.787541;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.11:13579024 chr11:013579024 0 W/13579024-13579024 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN_N1-130-1.SNP.11:13579628 chr11:013579628 0 W/13579628-13579628 FN_N1-130-1 Single Base Substitution C-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1409-S.SNP.11:13585855 chr11:013585855 0 W/13585855-13585855 FN1409-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN3909-S.SNP.11:13592005 chr11:013592005 0 W/13592005-13592005 FN3909-S SNP A -> G AC=2;AN=158;BQB=0.804582;DP=2485;DP4=891,1420,1,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.38862e-06;MQSB=0.999181;RPB=0.556898;SGB=34.0735;VDB=0.275752;EFF=INTRON(MODIFIER||||140|LOC_Os11g23980|protein_coding|CODING|LOC_Os11g23980.1|1|1) FN2724-S.SNP.11:13594074 chr11:013594074 0 W/13594074-13594074 FN2724-S SNP C -> T AC=1;AN=200;BQB=0.797908;DP=5019;DP4=2500,2252,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.03293e-07;MQSB=0.955562;RPB=0.888484;SGB=-0.141083;VDB=0.642502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1280-S.SNP.11:13594143 chr11:013594143 0 W/13594143-13594143 FN1280-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2652-S.SNP.11:13595362 chr11:013595362 0 W/13595362-13595362 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.985539;DP=4867;DP4=2323,2172,18,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0158208;MQB=3.72587e-07;MQSB=6.04117e-11;RPB=0.795865;SGB=45.1159;VDB=0.681686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.11:13595363 chr11:013595363 0 W/13595363-13595363 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.706288;DP=4875;DP4=2321,2227,16,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0153846;MQB=1.48898e-07;MQSB=9.08815e-11;RPB=0.894141;SGB=91.1059;VDB=0.696604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.11:13603700 chr11:013603700 0 W/13603700-13603700 FN2217-S SNP C -> A AC=1;AN=190;BQB=0.989867;DP=4032;DP4=1848,1784,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00297619;MQB=5.28043e-09;MQSB=0.162443;RPB=0.717935;SGB=7.21887;VDB=0.7845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.11:13603701 chr11:013603701 0 W/13603701-13603701 FN2217-S SNP G -> A AC=1;AN=190;BQB=0.408964;DP=4025;DP4=1833,1824,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00372671;MQB=1.74946e-08;MQSB=0.123403;RPB=0.915714;SGB=58.2031;VDB=0.611175;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.11:13605380 chr11:013605380 0 W/13605380-13605380 FN2606-S SNP C -> T AC=1;AN=198;BQB=0.994888;DP=4601;DP4=2122,2205,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.0054336;MQB=0.00131561;MQSB=7.0054e-20;RPB=0.343949;SGB=13.7737;VDB=0.333578;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.11:13608097 chr11:013608097 0 W/13608097-13608097 FN1429-S Single Base Substitution G-A INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1527-S.SNP.11:13610497 chr11:013610497 0 W/13610497-13610497 FN1527-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g24012 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1711-S.SNP.11:13611962 chr11:013611962 0 W/13611962-13611962 FN1711-S SNP G -> A AC=1;AN=186;BQB=0.761009;DP=2342;DP4=1084,1216,10,10;HOB=5.78101e-05;ICB=0.000116242;MQ=41;MQ0F=0.0269001;MQB=0.00342688;MQSB=0.0280569;RPB=0.554259;SGB=-12.8266;VDB=0.551982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1051Q|1255|LOC_Os11g24012|protein_coding|CODING|LOC_Os11g24012.1|2|1) FN4314-S.SNP.11:13614985 chr11:013614985 0 W/13614985-13614985 FN4314-S SNP G -> A AC=1;AN=170;BQB=0.97382;DP=3222;DP4=1692,1446,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0105525;MQB=0.00398718;MQSB=1.07376e-05;RPB=0.627629;SGB=52.3148;VDB=0.188744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.11:13615651 chr11:013615651 0 W/13615651-13615651 FN2638-S SNP G -> A AC=1;AN=200;BQB=0.516864;DP=4861;DP4=2338,2273,8,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00308578;MQB=6.02804e-06;MQSB=0.384119;RPB=0.334515;SGB=16.4591;VDB=0.0306322;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.11:13619159 chr11:013619159 0 W/13619159-13619159 FN343-S Single Base Substitution T-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2139-S.SNP.11:13619777 chr11:013619777 0 W/13619777-13619777 FN2139-S SNP T -> C AC=1;AN=168;BQB=0.115431;DP=3880;DP4=1887,1931,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000257732;MQB=4.07405e-09;MQSB=0.995363;RPB=0.999996;SGB=-71.2065;VDB=0.451483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.11:13631253 chr11:013631253 0 W/13631253-13631253 FN3554-S SNP G -> A AC=2;AN=188;BQB=0.624135;DP=2337;DP4=1122,1077,17,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.21191e-14;MQSB=0.295089;RPB=0.960322;SGB=108.042;VDB=0.462252;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.11:13640510 chr11:013640510 0 W/13640510-13640510 FN627-S Single Base Substitution C-T INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN3369-S.SNP.11:13640952 chr11:013640952 0 W/13640952-13640952 FN3369-S SNP C -> A AC=1;AN=184;BQB=0.943341;DP=2841;DP4=1200,1511,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33154e-12;MQSB=0.916697;RPB=0.206923;SGB=84.9167;VDB=0.0164715;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.11:13641852 chr11:013641852 0 W/13641852-13641852 FN1299-S Single Base Substitution C-A INTERGENIC HET SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1319-S.SNP.11:13656580 chr11:013656580 0 W/13656580-13656580 FN1319-S Single Base Substitution G-T INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN3875-S.SNP.11:13657788 chr11:013657788 0 W/13657788-13657788 FN3875-S SNP G -> C AC=1;AN=158;BQB=0.872904;DP=2291;DP4=1034,1145,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.02552e-07;MQSB=0.799754;RPB=0.984704;SGB=64.5449;VDB=0.971451;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.11:13665496 chr11:013665496 0 W/13665496-13665496 FN618-S Single Base Substitution C-A INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. W596-1-1.SNP.11:13671216 chr11:013671216 0 W/13671216-13671216 W596-1-1 Single Base Substitution T-G INTERGENIC HOMO SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN986-S.SNP.11:13671394 chr11:013671394 0 W/13671394-13671394 FN986-S Single Base Substitution C-T INTERGENIC HET SNo: 890, Mutant_ID: FN986-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN3716-S.SNP.11:13688441 chr11:013688441 0 W/13688441-13688441 FN3716-S SNP T -> G AC=1;AN=190;BQB=0.366379;DP=4151;DP4=1850,2116,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0315587;MQB=0.319771;MQSB=1.11447e-07;RPB=0.97253;SGB=21.1058;VDB=0.900985;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.11:13696411 chr11:013696411 0 W/13696411-13696411 FN-361 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g24090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN-361.SNP.11:13696412 chr11:013696412 0 W/13696412-13696412 FN-361 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g24090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN1660-S.SNP.11:13696896 chr11:013696896 0 W/13696896-13696896 FN1660-S Single Base Substitution A-T INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2408.SNP.11:13697778 chr11:013697778 0 W/13697778-13697778 FN2408 SNP T -> C AC=1;AN=200;BQB=0.559307;DP=3232;DP4=1751,1092,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.41726e-12;MQSB=0.325974;RPB=0.559385;SGB=42.5108;VDB=0.812071;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.11:13702830 chr11:013702830 0 W/13702830-13702830 FN4010-S SNP C -> T AC=1;AN=168;BQB=0.99932;DP=2518;DP4=1315,1100,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.8081e-06;MQSB=0.999104;RPB=0.791059;SGB=27.8864;VDB=0.997863;EFF=INTERGENIC(MODIFIER||||||||||1) FN-329.SNP.11:13708979 chr11:013708979 0 W/13708979-13708979 FN-329 Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN794-S.SNP.11:13709288 chr11:013709288 0 W/13709288-13709288 FN794-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN681-S.SNP.11:13710718 chr11:013710718 0 W/13710718-13710718 FN681-S Single Base Substitution C-A INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN987-S.SNP.11:13711849 chr11:013711849 0 W/13711849-13711849 FN987-S Single Base Substitution G-A INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN488-S.SNP.11:13719505 chr11:013719505 0 W/13719505-13719505 FN488-S Single Base Substitution C-T INTRON HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2260-S.SNP.11:13724844 chr11:013724844 0 W/13724844-13724844 FN2260-S SNP T -> C AC=1;AN=190;BQB=0.984164;DP=5320;DP4=2312,2695,13,34;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.8705e-23;MQSB=0.527026;RPB=0.999308;SGB=105.384;VDB=0.332538;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.11:13726286 chr11:013726286 0 W/13726286-13726286 FN1204-S Single Base Substitution T-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN-335.SNP.11:13728548 chr11:013728548 0 W/13728548-13728548 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3383-S.SNP.11:13735122 chr11:013735122 0 W/13735122-13735122 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.990023;DP=3333;DP4=1689,1533,13,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.46409e-11;MQSB=0.998213;RPB=0.370217;SGB=93.9603;VDB=0.169192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.11:13735228 chr11:013735228 0 W/13735228-13735228 FN1236-S Single Base Substitution C-T INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1669-S.SNP.11:13740429 chr11:013740429 0 W/13740429-13740429 FN1669-S SNP C -> T AC=1;AN=186;BQB=0.866457;DP=3851;DP4=1777,2029,15,12;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.22224e-10;MQSB=0.995398;RPB=0.131569;SGB=-103.637;VDB=0.754067;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.11:13741064 chr11:013741064 0 W/13741064-13741064 FN972-S Single Base Substitution C-A INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN2231-S.SNP.11:13746950 chr11:013746950 0 W/13746950-13746950 FN2231-S SNP T -> C AC=1;AN=190;BQB=0.481561;DP=5004;DP4=2289,2239,13,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28236e-18;MQSB=0.836879;RPB=0.530632;SGB=-4.91383;VDB=0.715379;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K877|1415|LOC_Os11g24170|protein_coding|CODING|LOC_Os11g24170.1|1|1) FN3831-S.SNP.11:13750361 chr11:013750361 0 W/13750361-13750361 FN3831-S SNP G -> A AC=1;AN=190;BQB=0.998738;DP=2656;DP4=1053,1511,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2652e-07;MQSB=0.999936;RPB=0.794721;SGB=53.6492;VDB=0.178826;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.11:13752278 chr11:013752278 0 W/13752278-13752278 FN927-S Single Base Substitution C-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. W276-2-1.SNP.11:13757452 chr11:013757452 0 W/13757452-13757452 W276-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3571-S.SNP.11:13765134 chr11:013765134 0 W/13765134-13765134 FN3571-S SNP C -> T AC=2;AN=188;BQB=0.813343;DP=3807;DP4=1666,1980,10,17;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=1.29189e-08;MQSB=0.523769;RPB=0.932054;SGB=117.128;VDB=0.814854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.11:13765408 chr11:013765408 0 W/13765408-13765408 FN2234-S SNP G -> A AC=2;AN=188;BQB=0.523703;DP=1639;DP4=1316,217,9,3;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000610128;MQB=6.76723e-06;MQSB=2.60841e-14;RPB=0.944343;SGB=49.0954;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.11:13767469 chr11:013767469 0 W/13767469-13767469 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.865338;DP=2977;DP4=1325,1503,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04658e-06;MQSB=0.985806;RPB=0.901982;SGB=15.9981;VDB=0.519344;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.11:13768591 chr11:013768591 0 W/13768591-13768591 FN2304 SNP T -> C AC=2;AN=192;BQB=0.261798;DP=4716;DP4=2253,1984,39,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000212044;MQB=1.26737e-37;MQSB=0.997495;RPB=0.734971;SGB=335.772;VDB=0.635649;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.11:13769386 chr11:013769386 0 W/13769386-13769386 FN1720-S SNP G -> A AC=2;AN=186;BQB=0.363193;DP=3751;DP4=1801,1878,23,24;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=2.77762e-18;MQSB=0.990779;RPB=0.974881;SGB=-204.309;VDB=0.648783;EFF=INTERGENIC(MODIFIER||||||||||1) 701-6.SNP.11:13773648 chr11:013773648 0 W/13773648-13773648 701-6 Single Base Substitution A-G INTRON Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN1310-S.SNP.11:13776860 chr11:013776860 0 W/13776860-13776860 FN1310-S Single Base Substitution A-G INTRON HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN832-S.SNP.11:13781608 chr11:013781608 0 W/13781608-13781608 FN832-S Single Base Substitution C-T INTRON HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN400-S.SNP.11:13781623 chr11:013781623 0 W/13781623-13781623 FN400-S Single Base Substitution C-T INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN525-S.SNP.11:13788215 chr11:013788215 0 W/13788215-13788215 FN525-S Single Base Substitution T-A INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN4176-S.SNP.11:13790174 chr11:013790174 0 W/13790174-13790174 FN4176-S SNP C -> T AC=1;AN=170;BQB=0.99319;DP=2625;DP4=1190,1238,13,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.81319e-09;MQSB=0.692262;RPB=0.10024;SGB=52.0913;VDB=0.750627;EFF=INTRON(MODIFIER||||367|LOC_Os11g24220|protein_coding|CODING|LOC_Os11g24220.1|1|1) FN1273-S.SNP.11:13792222 chr11:013792222 0 W/13792222-13792222 FN1273-S Single Base Substitution C-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN626-S.SNP.11:13793196 chr11:013793196 0 W/13793196-13793196 FN626-S Single Base Substitution G-A INTERGENIC HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3568-S.SNP.11:13794285 chr11:013794285 0 W/13794285-13794285 FN3568-S SNP C -> T AC=2;AN=188;BQB=0.662364;DP=2815;DP4=1298,1433,16,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.22489e-14;MQSB=0.542336;RPB=0.839459;SGB=135.302;VDB=0.358231;EFF=INTERGENIC(MODIFIER||||||||||1) FN1135-S.SNP.11:13799841 chr11:013799841 0 W/13799841-13799841 FN1135-S Single Base Substitution T-C INTERGENIC HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN972-S.SNP.11:13800703 chr11:013800703 0 W/13800703-13800703 FN972-S Single Base Substitution G-A INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN-104.SNP.11:13804119 chr11:013804119 0 W/13804119-13804119 FN-104 Single Base Substitution C-A INTERGENIC HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN1330-S.SNP.11:13804634 chr11:013804634 0 W/13804634-13804634 FN1330-S Single Base Substitution A-G INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN3926-S.SNP.11:13807366 chr11:013807366 0 W/13807366-13807366 FN3926-S SNP C -> A AC=1;AN=158;BQB=0.638507;DP=2253;DP4=992,1169,7,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.82006e-06;MQSB=0.00588774;RPB=0.909498;SGB=26.1881;VDB=0.280001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.11:13807445 chr11:013807445 0 W/13807445-13807445 FN2652-S SNP A -> G AC=1;AN=200;BQB=0.439619;DP=5094;DP4=2442,2383,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07337e-08;MQSB=0.948313;RPB=0.813613;SGB=29.4849;VDB=0.592405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.11:13811979 chr11:013811979 0 W/13811979-13811979 FN1436-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g24240 sinapoylglucose choline sinapoyltransferase, putative, expressed SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN-133.SNP.11:13815349 chr11:013815349 0 W/13815349-13815349 FN-133 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g24250 retrotransposon protein, putative, unclassified SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN4024-S.SNP.11:13816662 chr11:013816662 0 W/13816662-13816662 FN4024-S SNP G -> A AC=1;AN=168;BQB=0.850501;DP=2682;DP4=1445,1132,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0734526;MQB=0.957792;MQSB=0.0022642;RPB=0.581896;SGB=31.908;VDB=0.268428;EFF=INTERGENIC(MODIFIER||||||||||1) FN1283-S.SNP.11:13818177 chr11:013818177 0 W/13818177-13818177 FN1283-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2648-S.SNP.11:13825554 chr11:013825554 0 W/13825554-13825554 FN2648-S SNP G -> C AC=1;AN=200;BQB=0.935645;DP=3981;DP4=1866,1929,7,17;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.243155;MQB=0.999803;MQSB=6.56597e-25;RPB=0.996421;SGB=47.7211;VDB=0.205234;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccC|P1101|1506|LOC_Os11g24270|protein_coding|CODING|LOC_Os11g24270.1|1|1) FN1677-S.SNP.11:13826884 chr11:013826884 0 W/13826884-13826884 FN1677-S SNP C -> A AC=1;AN=188;BQB=0.35513;DP=3475;DP4=1677,1767,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=25;MQ0F=0.181583;MQB=0.925235;MQSB=0;RPB=0.99555;SGB=23.5329;VDB=0.92907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3095-S.SNP.11:13841868 chr11:013841868 0 W/13841868-13841868 FN3095-S SNP G -> A AC=1;AN=184;BQB=0.701363;DP=2985;DP4=1333,1420,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31914e-07;MQSB=0.748874;RPB=0.440401;SGB=11.3677;VDB=0.0969796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2468.SNP.11:13845409 chr11:013845409 0 W/13845409-13845409 FN2468 SNP A -> G AC=1;AN=200;BQB=0.6958;DP=4615;DP4=2347,2042,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.40337e-08;MQSB=0.888338;RPB=0.673968;SGB=40.2696;VDB=0.319185;EFF=INTRON(MODIFIER||||172|LOC_Os11g24300|protein_coding|CODING|LOC_Os11g24300.1|1|1) FN2200-S.SNP.11:13850170 chr11:013850170 0 W/13850170-13850170 FN2200-S SNP C -> A AC=2;AN=190;BQB=0.930915;DP=4565;DP4=2307,1924,20,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000219058;MQB=1.41998e-19;MQSB=0.720562;RPB=0.56803;SGB=39.8503;VDB=0.186352;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:13850170 chr11:013850170 0 W/13850170-13850170 FN2765-S SNP C -> A AC=2;AN=198;BQB=0.999879;DP=4129;DP4=2102,1801,22,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.50745e-20;MQSB=0.55961;RPB=0.372479;SGB=76.0565;VDB=0.0351222;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.11:13850170 chr11:013850170 0 W/13850170-13850170 FN302-S Single Base Substitution C-A INTERGENIC HET SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN432-S.SNP.11:13851105 chr11:013851105 0 W/13851105-13851105 FN432-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2124-S.SNP.11:13854698 chr11:013854698 0 W/13854698-13854698 FN2124-S SNP T -> C AC=1;AN=168;BQB=0.0182702;DP=3865;DP4=1872,1957,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.88787e-05;MQSB=0.994474;RPB=0.0471041;SGB=-13.6493;VDB=0.401104;EFF=INTRON(MODIFIER||||161|LOC_Os11g24320|protein_coding|CODING|LOC_Os11g24320.1|3|1) FN2326.SNP.11:13859190 chr11:013859190 0 W/13859190-13859190 FN2326 SNP C -> T AC=1;AN=192;BQB=0.298271;DP=4890;DP4=2329,2317,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00245399;MQB=3.40961e-11;MQSB=0.0535435;RPB=0.817876;SGB=34.0426;VDB=0.0478167;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V361M|643|LOC_Os11g24330|protein_coding|CODING|LOC_Os11g24330.1|2|1) FN2326.SNP.11:13859191 chr11:013859191 0 W/13859191-13859191 FN2326 SNP A -> C AC=1;AN=192;BQB=0.522995;DP=4865;DP4=2271,2278,7,13;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00267215;MQB=2.19183e-10;MQSB=0.102346;RPB=0.672137;SGB=61.1661;VDB=0.0100596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaG|N360K|643|LOC_Os11g24330|protein_coding|CODING|LOC_Os11g24330.1|2|1) FN1402-S.SNP.11:13860190 chr11:013860190 0 W/13860190-13860190 FN1402-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g24330 retrotransposon protein, putative, Ty1-copia subclass SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN3310-S.SNP.11:13860394 chr11:013860394 0 W/13860394-13860394 FN3310-S SNP C -> T AC=1;AN=184;BQB=0.977596;DP=2879;DP4=1511,1291,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000999825;MQSB=0.960465;RPB=0.466204;SGB=57.786;VDB=0.209247;EFF=INTERGENIC(MODIFIER||||||||||1) FN-159.SNP.11:13877484 chr11:013877484 0 W/13877484-13877484 FN-159 Single Base Substitution G-A INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. FN697-S.SNP.11:13877822 chr11:013877822 0 W/13877822-13877822 FN697-S Single Base Substitution A-T INTERGENIC HET SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN1433-S.SNP.11:13877953 chr11:013877953 0 W/13877953-13877953 FN1433-S Single Base Substitution G-A INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN1462-S.SNP.11:13886395 chr11:013886395 0 W/13886395-13886395 FN1462-S Single Base Substitution T-G INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN2674-S.SNP.11:13889463 chr11:013889463 0 W/13889463-13889463 FN2674-S SNP A -> T AC=1;AN=200;BQB=0.887794;DP=4869;DP4=2206,2446,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.02157e-16;MQSB=0.91239;RPB=0.666335;SGB=114.132;VDB=0.0170788;EFF=INTERGENIC(MODIFIER||||||||||1) FN_552-1-1.SNP.11:13891448 chr11:013891448 0 W/13891448-13891448 FN_552-1-1 Single Base Substitution T-C HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN-84.SNP.11:13892669 chr11:013892669 0 W/13892669-13892669 FN-84 Single Base Substitution T-C INTRON HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN-277.SNP.11:13893192 chr11:013893192 0 W/13893192-13893192 FN-277 Single Base Substitution T-C INTRON HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-232.SNP.11:13897742 chr11:013897742 0 W/13897742-13897742 FN-232 Single Base Substitution A-T INTRON HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN1184-S.SNP.11:13897786 chr11:013897786 0 W/13897786-13897786 FN1184-S Single Base Substitution T-C INTRON HET SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN2109-S.SNP.11:13905738 chr11:013905738 0 W/13905738-13905738 FN2109-S SNP C -> T AC=2;AN=168;BQB=0.958979;DP=2668;DP4=1002,1607,12,23;HOB=0.0235261;ICB=0.494119;MQ=33;MQ0F=0.0835832;MQB=0.332413;MQSB=8.20193e-23;RPB=0.11303;SGB=31.3762;VDB=0.75474;EFF=INTRON(MODIFIER||||393|LOC_Os11g24374|protein_coding|CODING|LOC_Os11g24374.1|7|1) W247-2-1.SNP.11:13917058 chr11:013917058 0 W/13917058-13917058 W247-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1680-S.SNP.11:13925178 chr11:013925178 0 W/13925178-13925178 FN1680-S SNP G -> T AC=1;AN=188;BQB=0.00880104;DP=3358;DP4=1742,1563,13,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.82612e-14;MQSB=0.992166;RPB=0.495142;SGB=-79.383;VDB=0.175782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.11:13925178 chr11:013925178 0 W/13925178-13925178 FN2790-S SNP G -> T AC=2;AN=198;BQB=0.69609;DP=4223;DP4=1960,2041,18,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000236798;MQB=6.95845e-22;MQSB=0.999025;RPB=0.946358;SGB=122.837;VDB=0.975651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.11:13926627 chr11:013926627 0 W/13926627-13926627 FN1136-19-S Single Base Substitution G-A INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN1561-S.SNP.11:13928659 chr11:013928659 0 W/13928659-13928659 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1657-S.SNP.11:13929152 chr11:013929152 0 W/13929152-13929152 FN1657-S Single Base Substitution C-T INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN762-S.SNP.11:13929197 chr11:013929197 0 W/13929197-13929197 FN762-S Single Base Substitution C-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2579-S.SNP.11:13931781 chr11:013931781 0 W/13931781-13931781 FN2579-S SNP T -> C AC=1;AN=198;BQB=0.996611;DP=3976;DP4=1779,1967,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000754527;MQB=7.3904e-12;MQSB=0.0582126;RPB=0.171694;SGB=14.1348;VDB=0.140063;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.11:13933289 chr11:013933289 0 W/13933289-13933289 FN1402-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN-258.SNP.11:13933971 chr11:013933971 0 W/13933971-13933971 FN-258 Single Base Substitution T-C INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN-194.SNP.11:13943003 chr11:013943003 0 W/13943003-13943003 FN-194 Single Base Substitution G-T INTRON HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3851-S.SNP.11:13950708 chr11:013950708 0 W/13950708-13950708 FN3851-S SNP G -> C AC=1;AN=158;BQB=0.950632;DP=2644;DP4=1281,1258,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.05736e-08;MQSB=0.95659;RPB=0.945959;SGB=47.0672;VDB=0.0449036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.11:13967008 chr11:013967008 0 W/13967008-13967008 FN3757-S SNP C -> T AC=1;AN=190;BQB=0.988129;DP=2664;DP4=989,1343,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.86394e-12;MQSB=0.43863;RPB=0.88962;SGB=71.6393;VDB=0.272854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3976-S.SNP.11:13974207 chr11:013974207 0 W/13974207-13974207 FN3976-S SNP T -> C AC=1;AN=168;BQB=0.92167;DP=2303;DP4=1034,1156,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.74411e-11;MQSB=0.987147;RPB=0.963455;SGB=62.1945;VDB=0.323417;EFF=INTRON(MODIFIER||||455|LOC_Os11g24510|protein_coding|CODING|LOC_Os11g24510.2|8|1),INTRON(MODIFIER||||479|LOC_Os11g24510|protein_coding|CODING|LOC_Os11g24510.1|8|1),INTRON(MODIFIER||||449|LOC_Os11g24510|protein_coding|CODING|LOC_Os11g24510.3|8|1) FN2209-S.SNP.11:13979725 chr11:013979725 0 W/13979725-13979725 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.884087;DP=4896;DP4=2018,2434,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.54584e-08;MQSB=0.961867;RPB=0.924508;SGB=2.55724;VDB=0.656765;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.11:13981014 chr11:013981014 0 W/13981014-13981014 FN-256 Single Base Substitution G-A INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN554-S.SNP.11:13984158 chr11:013984158 0 W/13984158-13984158 FN554-S Single Base Substitution T-C INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN-84.SNP.11:13987184 chr11:013987184 0 W/13987184-13987184 FN-84 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g24530 pentatricopeptide, putative, expressed SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN1050-S.SNP.11:13989076 chr11:013989076 0 W/13989076-13989076 FN1050-S Single Base Substitution C-A INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN-98.SNP.11:13996373 chr11:013996373 0 W/13996373-13996373 FN-98 Single Base Substitution T-C INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN-98.SNP.11:13996374 chr11:013996374 0 W/13996374-13996374 FN-98 Single Base Substitution C-A INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN2204-S.SNP.11:13999801 chr11:013999801 0 W/13999801-13999801 FN2204-S SNP T -> A AC=1;AN=190;BQB=0.988764;DP=5480;DP4=2605,2600,17,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53856e-20;MQSB=0.966369;RPB=0.279034;SGB=149.281;VDB=0.412114;EFF=INTRON(MODIFIER||||534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.1|4|1),INTRON(MODIFIER||||534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.2|4|1) FN1755-S.SNP.11:14003132 chr11:014003132 0 W/14003132-14003132 FN1755-S SNP G -> A AC=2;AN=188;BQB=0.402728;DP=3705;DP4=1738,1902,25,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.40845e-26;MQSB=0.992426;RPB=0.884468;SGB=5.64544;VDB=0.969161;EFF=INTRON(MODIFIER||||534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.1|8|1),INTRON(MODIFIER||||534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.2|8|1) FN2619-S.SNP.11:14006698 chr11:014006698 0 W/14006698-14006698 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.990936;DP=4194;DP4=2100,1844,21,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.10017e-21;MQSB=0.845805;RPB=0.999564;SGB=0.447097;VDB=0.621201;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W511*|534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.1|14|1),STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W511*|534|LOC_Os11g24540|protein_coding|CODING|LOC_Os11g24540.2|14|1) FN1576-S.SNP.11:14006846 chr11:014006846 0 W/14006846-14006846 FN1576-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1434-S.SNP.11:14008083 chr11:014008083 0 W/14008083-14008083 FN1434-S Single Base Substitution G-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1434-S.SNP.11:14008084 chr11:014008084 0 W/14008084-14008084 FN1434-S Single Base Substitution G-A INTERGENIC HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1256-S.SNP.11:14018708 chr11:014018708 0 W/14018708-14018708 FN1256-S Single Base Substitution G-T INTRON HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN3564-S.SNP.11:14019249 chr11:014019249 0 W/14019249-14019249 FN3564-S SNP T -> A AC=1;AN=188;BQB=0.916498;DP=2153;DP4=934,1168,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.63635e-06;MQSB=0.536025;RPB=0.987321;SGB=21.8113;VDB=0.605799;EFF=INTRON(MODIFIER||||793|LOC_Os11g24560|protein_coding|CODING|LOC_Os11g24560.1|8|1) FN3564-S.SNP.11:14019250 chr11:014019250 0 W/14019250-14019250 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.861746;DP=2157;DP4=933,1184,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.23817e-06;MQSB=0.463431;RPB=0.78431;SGB=35.3493;VDB=0.426121;EFF=INTRON(MODIFIER||||793|LOC_Os11g24560|protein_coding|CODING|LOC_Os11g24560.1|8|1) W721-2-1.SNP.11:14024876 chr11:014024876 0 W/14024876-14024876 W721-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN4260-S.SNP.11:14028166 chr11:014028166 0 W/14028166-14028166 FN4260-S SNP G -> A AC=2;AN=170;BQB=0.864377;DP=2631;DP4=1474,1044,21,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.46568e-16;MQSB=0.922437;RPB=0.936228;SGB=100.288;VDB=0.341841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V168I|661|LOC_Os11g24570|protein_coding|CODING|LOC_Os11g24570.1|1|1) FN1707-S.SNP.11:14036685 chr11:014036685 0 W/14036685-14036685 FN1707-S SNP A -> C AC=1;AN=188;BQB=0.167499;DP=1846;DP4=1508,319,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.88605e-05;MQSB=0.999841;RPB=0.87697;SGB=-0.634963;VDB=0.902899;EFF=INTERGENIC(MODIFIER||||||||||1) FN1748-S.SNP.11:14041086 chr11:014041086 0 W/14041086-14041086 FN1748-S SNP G -> C AC=1;AN=188;BQB=0.527263;DP=3399;DP4=1618,1730,13,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.7049e-12;MQSB=0.987682;RPB=0.477674;SGB=17.8846;VDB=0.839935;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G284A|454|LOC_Os11g24590|protein_coding|CODING|LOC_Os11g24590.1|2|1) FN1450-S.SNP.11:14046243 chr11:014046243 0 W/14046243-14046243 FN1450-S Single Base Substitution C-T INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3822-S.SNP.11:14051367 chr11:014051367 0 W/14051367-14051367 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.986325;DP=2867;DP4=1321,1436,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26258e-06;MQSB=0.986399;RPB=0.931442;SGB=44.5415;VDB=0.332122;EFF=INTRON(MODIFIER||||221|LOC_Os11g24630|protein_coding|CODING|LOC_Os11g24630.1|1|1) FN2436.SNP.11:14055067 chr11:014055067 0 W/14055067-14055067 FN2436 SNP T -> A AC=2;AN=200;BQB=0.464284;DP=4305;DP4=2082,1988,22,24;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.01629e-18;MQSB=3.71454e-16;RPB=0.800404;SGB=206.235;VDB=0.966768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.11:14058115 chr11:014058115 0 W/14058115-14058115 FN1176-S Single Base Substitution C-G INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2268-S.SNP.11:14061650 chr11:014061650 0 W/14061650-14061650 FN2268-S SNP G -> C AC=1;AN=190;BQB=0.754721;DP=3550;DP4=1863,1489,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00145427;MQSB=3.26898e-05;RPB=0.758741;SGB=30.8803;VDB=0.549853;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cCt|R60P|166|LOC_Os11g24650|protein_coding|CODING|LOC_Os11g24650.1|2|1) FN3854-S.SNP.11:14068315 chr11:014068315 0 W/14068315-14068315 FN3854-S SNP C -> G AC=1;AN=158;BQB=0.98974;DP=2608;DP4=1214,1278,4,14;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.00920245;MQB=6.11804e-09;MQSB=0.772031;RPB=0.0129385;SGB=-60.8948;VDB=0.244289;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.11:14077487 chr11:014077487 0 W/14077487-14077487 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.997806;DP=2410;DP4=1112,1235,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.96711e-05;MQSB=0.988694;RPB=0.900978;SGB=26.1347;VDB=0.369435;EFF=INTERGENIC(MODIFIER||||||||||1) FN-168.SNP.11:14081810 chr11:014081810 0 W/14081810-14081810 FN-168 Single Base Substitution T-G INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2134-S.SNP.11:14093859 chr11:014093859 0 W/14093859-14093859 FN2134-S SNP C -> G AC=1;AN=168;BQB=0.951732;DP=3864;DP4=2008,1808,18,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.69004e-13;MQSB=0.997396;RPB=0.738538;SGB=-43.4892;VDB=0.182646;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.11:14098037 chr11:014098037 0 W/14098037-14098037 FN2113-S SNP G -> T AC=1;AN=168;BQB=0.483873;DP=3696;DP4=1968,1687,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.94202e-11;MQSB=0.998023;RPB=0.991491;SGB=11.3448;VDB=0.1756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A189D|378|LOC_Os11g24750|protein_coding|CODING|LOC_Os11g24750.1|2|1) FN-166.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN-166 Single Base Substitution T-C INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1188-S.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN1188-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1630-S.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1707-S.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN1707-S SNP T -> C AC=2;AN=188;BQB=0.406536;DP=2450;DP4=1812,603,20,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.37738e-14;MQSB=0.762044;RPB=0.145264;SGB=61.6823;VDB=0.15744;EFF=INTERGENIC(MODIFIER||||||||||1) FN2491.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN2491 SNP T -> C AC=1;AN=200;BQB=0.99869;DP=3587;DP4=2206,1164,11,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68074e-08;MQSB=0.872155;RPB=0.991454;SGB=54.2646;VDB=0.57234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN3417-S SNP T -> C AC=2;AN=184;BQB=0.969594;DP=1060;DP4=906,117,18,1;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.34087e-12;MQSB=0.337304;RPB=0.766882;SGB=76.6109;VDB=0.754856;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.11:14100823 chr11:014100823 0 W/14100823-14100823 FN3780-S SNP T -> C AC=1;AN=190;BQB=0.707593;DP=1081;DP4=906,140,7,0;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00127431;MQSB=0.744989;RPB=0.748791;SGB=26.3271;VDB=0.750734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.11:14107511 chr11:014107511 0 W/14107511-14107511 FN2387 SNP G -> A AC=2;AN=192;BQB=0.963356;DP=4581;DP4=2203,2098,33,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.09006e-33;MQSB=0.990176;RPB=0.101177;SGB=260.704;VDB=0.468649;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.11:14107685 chr11:014107685 0 W/14107685-14107685 FN4184-S SNP G -> A AC=1;AN=170;BQB=0.992008;DP=2551;DP4=1317,1171,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0.00352803;MQB=1.71284e-05;MQSB=0.19738;RPB=0.787843;SGB=43.4296;VDB=0.0771861;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.11:14111218 chr11:014111218 0 W/14111218-14111218 FN1273-S Single Base Substitution T-A INTRON HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1443-S.SNP.11:14114199 chr11:014114199 0 W/14114199-14114199 FN1443-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3964-S.SNP.11:14133465 chr11:014133465 0 W/14133465-14133465 FN3964-S SNP A -> G AC=2;AN=168;BQB=0.987356;DP=2476;DP4=1218,1141,26,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.54121e-25;MQSB=0.855868;RPB=0.795522;SGB=179.716;VDB=0.0248535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1742-S.SNP.11:14134385 chr11:014134385 0 W/14134385-14134385 FN1742-S SNP A -> C AC=2;AN=188;BQB=0.997677;DP=3777;DP4=1857,1855,20,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.49982e-23;MQSB=0.981455;RPB=0.963907;SGB=-157.685;VDB=0.601621;EFF=UTR_3_PRIME(MODIFIER||2138||113|LOC_Os11g24800|protein_coding|CODING|LOC_Os11g24800.1|2|1) FN2199-S.SNP.11:14134435 chr11:014134435 0 W/14134435-14134435 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.977665;DP=4865;DP4=2355,2180,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9696e-07;MQSB=0.976002;RPB=0.555415;SGB=8.77275;VDB=0.722594;EFF=UTR_3_PRIME(MODIFIER||2088||113|LOC_Os11g24800|protein_coding|CODING|LOC_Os11g24800.1|2|1) FN3980-S.SNP.11:14146538 chr11:014146538 0 W/14146538-14146538 FN3980-S SNP T -> A AC=1;AN=168;BQB=0.831814;DP=2566;DP4=1303,1197,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000273982;MQSB=0.967994;RPB=0.52483;SGB=30.0193;VDB=0.316575;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.11:14151197 chr11:014151197 0 W/14151197-14151197 FN-175 Single Base Substitution G-A INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1732-S.SNP.11:14153429 chr11:014153429 0 W/14153429-14153429 FN1732-S SNP G -> A AC=1;AN=188;BQB=0.811631;DP=3142;DP4=958,2148,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.87726e-07;MQSB=0.89295;RPB=0.850717;SGB=-14.9998;VDB=0.628702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1709-S.SNP.11:14156723 chr11:014156723 0 W/14156723-14156723 FN1709-S SNP C -> T AC=1;AN=188;BQB=0.982834;DP=3121;DP4=1556,1536,3,11;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.309516;MQB=0.204964;MQSB=0;RPB=0.997804;SGB=20.9896;VDB=0.189882;EFF=INTRON(MODIFIER||||80|LOC_Os11g24824|protein_coding|CODING|LOC_Os11g24824.1|1|1) FN1182-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN1182-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g24840 ankyrin repeat family protein, putative, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1519-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN1519-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os11g24840 ankyrin repeat family protein, putative, expressed SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2599-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.954185;DP=4753;DP4=2129,2365,13,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.2594e-17;MQSB=0.779156;RPB=0.923955;SGB=65.676;VDB=0.295841;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M337I|406|LOC_Os11g24840|protein_coding|CODING|LOC_Os11g24840.1|2|1) FN558-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN558-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g24840 ankyrin repeat family protein, putative, expressed SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN812-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN812-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g24840 ankyrin repeat family protein, putative, expressed SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN869-S.SNP.11:14164428 chr11:014164428 0 W/14164428-14164428 FN869-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g24840 ankyrin repeat family protein, putative, expressed SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN2190-S.SNP.11:14176553 chr11:014176553 0 W/14176553-14176553 FN2190-S SNP G -> A AC=1;AN=190;BQB=0.253938;DP=4488;DP4=2428,1670,24,20;HOB=5.54017e-05;ICB=0.000111386;MQ=15;MQ0F=0.389483;MQB=0.154279;MQSB=0;RPB=0.0701832;SGB=97.7221;VDB=0.122705;EFF=INTRON(MODIFIER||||745|LOC_Os11g24870|protein_coding|CODING|LOC_Os11g24870.1|1|1) FN2194-S.SNP.11:14179753 chr11:014179753 0 W/14179753-14179753 FN2194-S SNP T -> A AC=1;AN=190;BQB=0.742738;DP=4768;DP4=2048,2374,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=20;MQ0F=0.206376;MQB=0.432094;MQSB=0;RPB=0.568628;SGB=103.624;VDB=0.0806096;EFF=STOP_LOST(HIGH|MISSENSE|Tag/Aag|*746K|745|LOC_Os11g24870|protein_coding|CODING|LOC_Os11g24870.1|4|1) FN-123.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN-123 Single Base Substitution G-A INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN-305.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN-305 Single Base Substitution G-A INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-94.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN-94 Single Base Substitution G-A INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1039-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN1039-S Single Base Substitution G-A INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1131-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN1131-S Single Base Substitution G-A INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN1330-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN1330-S Single Base Substitution G-A INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1460-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN1460-S Single Base Substitution G-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2246-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN2246-S SNP G -> A AC=2;AN=190;BQB=0.996495;DP=5509;DP4=2346,2675,18,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.47375e-22;MQSB=0.806506;RPB=0.813363;SGB=0.0710663;VDB=0.755415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN2284 SNP G -> A AC=2;AN=192;BQB=0.862182;DP=5405;DP4=2405,2594,28,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.43975e-31;MQSB=0.873867;RPB=0.971039;SGB=-119.056;VDB=0.362691;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN267-S Single Base Substitution G-A INTERGENIC HOMO SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN3316-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN3316-S SNP G -> A AC=2;AN=184;BQB=0.516395;DP=3147;DP4=1505,1501,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.85145e-13;MQSB=0.866967;RPB=0.768359;SGB=22.0202;VDB=0.729704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN3727-S SNP G -> A AC=1;AN=190;BQB=0.343446;DP=3150;DP4=1472,1550,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.11803e-05;MQSB=0.908436;RPB=0.996201;SGB=58.2031;VDB=0.765133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN3818-S SNP G -> A AC=2;AN=190;BQB=0.99978;DP=2935;DP4=1395,1383,16,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.31667e-22;MQSB=0.981151;RPB=0.45268;SGB=167.496;VDB=0.830505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN3968-S SNP G -> A AC=1;AN=168;BQB=0.999731;DP=2932;DP4=1412,1386,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46028e-09;MQSB=0.759351;RPB=0.869961;SGB=27.0464;VDB=0.507603;EFF=INTERGENIC(MODIFIER||||||||||1) FN4302-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN4302-S SNP G -> A AC=2;AN=170;BQB=0.933479;DP=2552;DP4=1172,1301,11,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.75502e-14;MQSB=0.873998;RPB=0.880198;SGB=96.7413;VDB=0.440911;EFF=INTERGENIC(MODIFIER||||||||||1) FN444-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN444-S Single Base Substitution G-A INTERGENIC HOMO SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN703-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN703-S Single Base Substitution G-A INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN952-S.SNP.11:14183016 chr11:014183016 0 W/14183016-14183016 FN952-S Single Base Substitution G-A INTERGENIC HOMO SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-4.SNP.11:14194469 chr11:014194469 0 W/14194469-14194469 FN-4 Single Base Substitution C-A INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN1401-S.SNP.11:14194469 chr11:014194469 0 W/14194469-14194469 FN1401-S Single Base Substitution C-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1402-S.SNP.11:14196339 chr11:014196339 0 W/14196339-14196339 FN1402-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1368-S.SNP.11:14197093 chr11:014197093 0 W/14197093-14197093 FN1368-S Single Base Substitution G-C STOP_GAINED HET LOC_Os11g24930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2082-S.SNP.11:14198643 chr11:014198643 0 W/14198643-14198643 FN2082-S SNP C -> T AC=1;AN=168;BQB=0.862511;DP=2344;DP4=1276,1001,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0345563;MQB=0.804605;MQSB=1.2172e-21;RPB=0.783204;SGB=-12.7876;VDB=0.432899;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T540|1701|LOC_Os11g24930|protein_coding|CODING|LOC_Os11g24930.1|3|1) FN2198-S.SNP.11:14201631 chr11:014201631 0 W/14201631-14201631 FN2198-S SNP C -> G AC=1;AN=190;BQB=0.623645;DP=4940;DP4=2691,1926,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05498e-06;MQSB=0.898326;RPB=0.778063;SGB=49.0954;VDB=0.323915;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.11:14212929 chr11:014212929 0 W/14212929-14212929 FN1327-S Single Base Substitution G-A INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3319-S.SNP.11:14215668 chr11:014215668 0 W/14215668-14215668 FN3319-S SNP G -> A AC=2;AN=184;BQB=0.960282;DP=2876;DP4=1372,1403,12,11;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0399861;MQB=0.824107;MQSB=1.22759e-07;RPB=0.973397;SGB=98.4821;VDB=0.0760891;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A792V|1176|LOC_Os11g24964|protein_coding|CODING|LOC_Os11g24964.1|6|1) FN3543-S.SNP.11:14216154 chr11:014216154 0 W/14216154-14216154 FN3543-S SNP T -> A AC=1;AN=188;BQB=0.997538;DP=2856;DP4=1349,1360,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0129552;MQB=0.666045;MQSB=0.20123;RPB=0.723694;SGB=28.8977;VDB=0.420136;EFF=INTRON(MODIFIER||||1176|LOC_Os11g24964|protein_coding|CODING|LOC_Os11g24964.1|4|1) FN3863-S.SNP.11:14216482 chr11:014216482 0 W/14216482-14216482 FN3863-S SNP C -> T AC=1;AN=158;BQB=0.970935;DP=2174;DP4=1115,984,9,2;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.023919;MQB=0.80944;MQSB=0.872521;RPB=0.230444;SGB=42.6978;VDB=0.622324;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R634K|1176|LOC_Os11g24964|protein_coding|CODING|LOC_Os11g24964.1|4|1) FN4275-S.SNP.11:14221133 chr11:014221133 0 W/14221133-14221133 FN4275-S SNP A -> T AC=2;AN=170;BQB=0.976126;DP=2711;DP4=1402,1199,16,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.17982e-17;MQSB=0.977206;RPB=0.72212;SGB=89.9604;VDB=0.0464567;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.11:14229278 chr11:014229278 0 W/14229278-14229278 FN473-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g24990 retrotransposon protein, putative, unclassified, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN473-S.SNP.11:14229289 chr11:014229289 0 W/14229289-14229289 FN473-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g24990 retrotransposon protein, putative, unclassified, expressed SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. W706-3-1.SNP.11:14233305 chr11:014233305 0 W/14233305-14233305 W706-3-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g24990 retrotransposon protein, putative, unclassified, expressed SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2419.SNP.11:14234991 chr11:014234991 0 W/14234991-14234991 FN2419 SNP G -> A AC=2;AN=200;BQB=0.539042;DP=4398;DP4=2377,1743,21,28;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.0129604;MQB=3.36722e-21;MQSB=0.0135015;RPB=0.0419609;SGB=112.85;VDB=0.123594;EFF=INTRON(MODIFIER||||1819|LOC_Os11g24990|protein_coding|CODING|LOC_Os11g24990.1|8|1) FN-348.SNP.11:14235109 chr11:014235109 0 W/14235109-14235109 FN-348 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g24990 retrotransposon protein, putative, unclassified, expressed SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN1614-S.SNP.11:14235749 chr11:014235749 0 W/14235749-14235749 FN1614-S Single Base Substitution G-T INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN403-S.SNP.11:14248380 chr11:014248380 0 W/14248380-14248380 FN403-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g25020 plant-specific domain TIGR01615 family protein, expressed SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN_772-3-1.SNP.11:14249481 chr11:014249481 0 W/14249481-14249481 FN_772-3-1 Single Base Substitution A-C HET SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN1067-S.SNP.11:14254430 chr11:014254430 0 W/14254430-14254430 FN1067-S Single Base Substitution G-A INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN2275-S.SNP.11:14261627 chr11:014261627 0 W/14261627-14261627 FN2275-S SNP G -> A AC=1;AN=188;BQB=0.988421;DP=4492;DP4=2097,2086,19,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000445236;MQB=7.98263e-14;MQSB=0.00440603;RPB=0.657554;SGB=114.286;VDB=0.792157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.11:14278821 chr11:014278821 0 W/14278821-14278821 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.982297;DP=2510;DP4=1194,1242,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.09998e-09;MQSB=0.995418;RPB=0.905314;SGB=67.1521;VDB=0.406889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.11:14282809 chr11:014282809 0 W/14282809-14282809 FN2338 SNP G -> T AC=1;AN=192;BQB=0.859068;DP=5117;DP4=2224,2571,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.33542e-17;MQSB=0.999992;RPB=0.833083;SGB=-7.43215;VDB=0.868087;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.11:14285830 chr11:014285830 0 W/14285830-14285830 FN793-S Single Base Substitution G-T INTRON HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1444-S.SNP.11:14288053 chr11:014288053 0 W/14288053-14288053 FN1444-S Single Base Substitution T-A INTRON HOMO SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN2482.SNP.11:14295491 chr11:014295491 0 W/14295491-14295491 FN2482 SNP A -> G AC=2;AN=200;BQB=0.978271;DP=4534;DP4=2004,2089,11,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.06362e-13;MQSB=0.999896;RPB=0.169396;SGB=22.3313;VDB=0.00653752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.11:14296394 chr11:014296394 0 W/14296394-14296394 FN2618-S SNP G -> T AC=2;AN=198;BQB=0.830486;DP=4183;DP4=1860,2014,25,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.8995e-24;MQSB=0.701179;RPB=0.982878;SGB=102.008;VDB=0.344289;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.11:14303960 chr11:014303960 0 W/14303960-14303960 FN1229-S Single Base Substitution A-G INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN-93.SNP.11:14308436 chr11:014308436 0 W/14308436-14308436 FN-93 Single Base Substitution C-A INTRON HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1068-S.SNP.11:14312464 chr11:014312464 0 W/14312464-14312464 FN1068-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN1617-S.SNP.11:14318408 chr11:014318408 0 W/14318408-14318408 FN1617-S Single Base Substitution C-G INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2436.SNP.11:14318408 chr11:014318408 0 W/14318408-14318408 FN2436 SNP C -> G AC=2;AN=200;BQB=0.438721;DP=4719;DP4=2397,1962,29,23;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000211909;MQB=1.94444e-13;MQSB=0.359086;RPB=0.985199;SGB=64.0657;VDB=0.0100399;EFF=INTERGENIC(MODIFIER||||||||||1) FN2561-S.SNP.11:14318408 chr11:014318408 0 W/14318408-14318408 FN2561-S SNP C -> G AC=2;AN=198;BQB=0.87496;DP=4376;DP4=2285,1783,10,12;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000228519;MQB=7.28605e-07;MQSB=0.0898081;RPB=0.810796;SGB=15.7299;VDB=0.517564;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.11:14318408 chr11:014318408 0 W/14318408-14318408 FN3293-S SNP C -> G AC=1;AN=184;BQB=0.813181;DP=3280;DP4=1569,1571,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000304878;MQB=0.00134666;MQSB=0.032117;RPB=0.628504;SGB=62.3078;VDB=0.820472;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.11:14318408 chr11:014318408 0 W/14318408-14318408 FN3851-S SNP C -> G AC=1;AN=158;BQB=0.222258;DP=2504;DP4=1284,1098,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.000399361;MQB=0.000280034;MQSB=0.0711278;RPB=0.990743;SGB=54.2901;VDB=0.972885;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.11:14318736 chr11:014318736 0 W/14318736-14318736 FN2542-S SNP T -> C AC=1;AN=198;BQB=0.149969;DP=4692;DP4=2445,2038,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.82517e-09;MQSB=0.96161;RPB=0.485915;SGB=24.1541;VDB=0.848919;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.11:14322805 chr11:014322805 0 W/14322805-14322805 FN2375 SNP T -> G AC=1;AN=192;BQB=0.094851;DP=4819;DP4=2252,2220,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.6436e-10;MQSB=0.702718;RPB=0.996565;SGB=19.8696;VDB=0.76685;EFF=INTERGENIC(MODIFIER||||||||||1) FN3322-S.SNP.11:14327242 chr11:014327242 0 W/14327242-14327242 FN3322-S SNP T -> A AC=1;AN=184;BQB=0.900649;DP=2494;DP4=1260,1143,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.37026e-06;MQSB=0.919694;RPB=0.63048;SGB=35.1773;VDB=0.186674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2704-S.SNP.11:14332209 chr11:014332209 0 W/14332209-14332209 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.802349;DP=4715;DP4=2161,2288,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59139e-13;MQSB=0.439479;RPB=0.998539;SGB=39.9056;VDB=0.863571;EFF=UTR_3_PRIME(MODIFIER||289||413|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.2|7|1),UTR_3_PRIME(MODIFIER||289||131|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.5|3|1),INTRON(MODIFIER||||449|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.1|7|1),INTRON(MODIFIER||||264|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.3|4|1),INTRON(MODIFIER||||167|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.4|3|1),INTRON(MODIFIER||||167|LOC_Os11g25160|protein_coding|CODING|LOC_Os11g25160.6|3|1) W138-2-1.SNP.11:14335540 chr11:014335540 0 W/14335540-14335540 W138-2-1 Single Base Substitution C-A UTR_3_PRIME HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN923-S.SNP.11:14336585 chr11:014336585 0 W/14336585-14336585 FN923-S Single Base Substitution C-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2779-S.SNP.11:14336747 chr11:014336747 0 W/14336747-14336747 FN2779-S SNP G -> A AC=1;AN=198;BQB=0.486437;DP=2965;DP4=707,2075,4,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09128e-14;MQSB=0.537197;RPB=0.756848;SGB=83.2905;VDB=0.464234;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.11:14337503 chr11:014337503 0 W/14337503-14337503 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN-231.SNP.11:14347148 chr11:014347148 0 W/14347148-14347148 FN-231 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g25180 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN3464-S.SNP.11:14348713 chr11:014348713 0 W/14348713-14348713 FN3464-S SNP A -> G AC=2;AN=184;BQB=0.990294;DP=3042;DP4=1498,1410,17,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.86714e-17;MQSB=0.997894;RPB=0.989375;SGB=88.5747;VDB=0.430715;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.11:14348914 chr11:014348914 0 W/14348914-14348914 W598-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN3985-S.SNP.11:14350057 chr11:014350057 0 W/14350057-14350057 FN3985-S SNP G -> T AC=1;AN=168;BQB=0.989914;DP=3015;DP4=1531,1386,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17051e-10;MQSB=0.647291;RPB=0.344448;SGB=65.4653;VDB=0.439691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3985-S.SNP.11:14350058 chr11:014350058 0 W/14350058-14350058 FN3985-S SNP A -> G AC=1;AN=168;BQB=0.884416;DP=3004;DP4=1534,1379,5,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.15828e-10;MQSB=0.603078;RPB=0.385552;SGB=65.4653;VDB=0.429885;EFF=INTERGENIC(MODIFIER||||||||||1) FN1213-S.SNP.11:14350817 chr11:014350817 0 W/14350817-14350817 FN1213-S Single Base Substitution G-T INTERGENIC HET SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN2758-S.SNP.11:14355803 chr11:014355803 0 W/14355803-14355803 FN2758-S SNP G -> T AC=1;AN=200;BQB=0.643447;DP=4773;DP4=2292,2232,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.75008e-11;MQSB=0.952022;RPB=0.897252;SGB=77.2904;VDB=0.532805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L475I|576|LOC_Os11g25190|protein_coding|CODING|LOC_Os11g25190.1|1|1) FN1622-S.SNP.11:14358174 chr11:014358174 0 W/14358174-14358174 FN1622-S Single Base Substitution C-G INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1576-S.SNP.11:14360446 chr11:014360446 0 W/14360446-14360446 FN1576-S Single Base Substitution T-A INTERGENIC HET SNo: 1314, Mutant_ID: FN1576-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3924-S.SNP.11:14364500 chr11:014364500 0 W/14364500-14364500 FN3924-S SNP G -> A AC=1;AN=158;BQB=0.910806;DP=2125;DP4=996,1005,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.31554e-07;MQSB=0.49675;RPB=0.350376;SGB=44.1818;VDB=0.371298;EFF=INTRON(MODIFIER||||816|LOC_Os11g25210|protein_coding|CODING|LOC_Os11g25210.1|1|1) FN1333-S.SNP.11:14364504 chr11:014364504 0 W/14364504-14364504 FN1333-S Single Base Substitution C-T INTRON HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2339.SNP.11:14365036 chr11:014365036 0 W/14365036-14365036 FN2339 SNP T -> G AC=1;AN=192;BQB=0.989259;DP=4585;DP4=2191,2152,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.03276e-11;MQSB=0.988206;RPB=0.7043;SGB=61.1661;VDB=0.00949065;EFF=INTRON(MODIFIER||||816|LOC_Os11g25210|protein_coding|CODING|LOC_Os11g25210.1|1|1) FN3551-S.SNP.11:14372979 chr11:014372979 0 W/14372979-14372979 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.805717;DP=2709;DP4=1525,1102,7,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.68532e-06;MQSB=0.999238;RPB=0.756798;SGB=32.441;VDB=0.495162;EFF=INTRON(MODIFIER||||89|LOC_Os11g25230|protein_coding|CODING|LOC_Os11g25230.1|1|1) FN-59.SNP.11:14379728 chr11:014379728 0 W/14379728-14379728 FN-59 Single Base Substitution C-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1566-S.SNP.11:14432307 chr11:014432307 0 W/14432307-14432307 FN1566-S Single Base Substitution A-C INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN1566-S.SNP.11:14432308 chr11:014432308 0 W/14432308-14432308 FN1566-S Single Base Substitution T-A INTERGENIC HET SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN4164-S.SNP.11:14446968 chr11:014446968 0 W/14446968-14446968 FN4164-S SNP C -> A AC=2;AN=170;BQB=0.845879;DP=3254;DP4=1359,1610,12,22;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.00553165;MQB=4.82614e-07;MQSB=0.00526475;RPB=0.91422;SGB=145.61;VDB=0.719473;EFF=INTRON(MODIFIER||||518|LOC_Os11g25350|protein_coding|CODING|LOC_Os11g25350.1|1|1) FN3372-S.SNP.11:14448491 chr11:014448491 0 W/14448491-14448491 FN3372-S SNP C -> T AC=1;AN=184;BQB=0.999038;DP=2982;DP4=1325,1538,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.018444;MQB=0.0411352;MQSB=0.999349;RPB=0.501432;SGB=39.2697;VDB=0.291443;EFF=INTRON(MODIFIER||||518|LOC_Os11g25350|protein_coding|CODING|LOC_Os11g25350.1|3|1) FN760-S.SNP.11:14449195 chr11:014449195 0 W/14449195-14449195 FN760-S Single Base Substitution A-T INTRON HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2308.SNP.11:14457576 chr11:014457576 0 W/14457576-14457576 FN2308 SNP G -> T AC=1;AN=192;BQB=0.984653;DP=5060;DP4=2658,2174,8,12;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000395257;MQB=2.88801e-08;MQSB=1.63635e-07;RPB=0.819548;SGB=12.0478;VDB=0.938229;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.11:14463859 chr11:014463859 0 W/14463859-14463859 FN2652-S SNP T -> C AC=1;AN=200;BQB=0.0789429;DP=4387;DP4=1966,2054,14,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.28852e-22;MQSB=0.956225;RPB=0.915155;SGB=119.583;VDB=0.579062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.11:14465913 chr11:014465913 0 W/14465913-14465913 FN2464 SNP G -> A AC=1;AN=200;BQB=0.697507;DP=4576;DP4=2066,2208,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.76309e-05;MQSB=0.399415;RPB=0.575371;SGB=25.849;VDB=0.279539;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q79|473|LOC_Os11g25380|protein_coding|CODING|LOC_Os11g25380.1|3|1) FN3393-S.SNP.11:14467164 chr11:014467164 0 W/14467164-14467164 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.944262;DP=3346;DP4=1597,1653,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38903e-05;MQSB=0.9996;RPB=0.766179;SGB=39.699;VDB=0.42619;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H229|473|LOC_Os11g25380|protein_coding|CODING|LOC_Os11g25380.1|4|1) FN-268.SNP.11:14468732 chr11:014468732 0 W/14468732-14468732 FN-268 Single Base Substitution C-A INTRON HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3776-S.SNP.11:14469649 chr11:014469649 0 W/14469649-14469649 FN3776-S SNP G -> C AC=1;AN=190;BQB=0.998245;DP=2787;DP4=1274,1406,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000358809;MQB=8.41236e-09;MQSB=0.987863;RPB=0.872411;SGB=46.7622;VDB=0.456713;EFF=INTERGENIC(MODIFIER||||||||||1) FN4231-S.SNP.11:14473168 chr11:014473168 0 W/14473168-14473168 FN4231-S SNP A -> C AC=1;AN=170;BQB=0.97504;DP=2686;DP4=1167,1361,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0182427;MQB=0.0943039;MQSB=0.850342;RPB=0.497268;SGB=2.88981;VDB=0.346756;EFF=INTRON(MODIFIER||||366|LOC_Os11g25390|protein_coding|CODING|LOC_Os11g25390.1|1|1) W450-6-1.SNP.11:14475670 chr11:014475670 0 W/14475670-14475670 W450-6-1 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN4068-S.SNP.11:14479171 chr11:014479171 0 W/14479171-14479171 FN4068-S SNP T -> G AC=1;AN=182;BQB=0.932327;DP=3293;DP4=1513,1617,15,6;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.0416034;MQB=0.597573;MQSB=3.8907e-35;RPB=0.791954;SGB=63.7146;VDB=0.990561;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-119-1.SNP.11:14479805 chr11:014479805 0 W/14479805-14479805 FN_N1-119-1 Single Base Substitution G-T HET SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN-387.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN-387 Single Base Substitution G-A INTRON HOMO SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN1300-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN1300-S Single Base Substitution G-A INTRON HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN1473-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN1473-S Single Base Substitution G-A INTRON Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN2120-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN2120-S SNP G -> A AC=1;AN=168;BQB=0.201752;DP=3398;DP4=1867,1466,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.60578e-11;MQSB=0.591682;RPB=0.993352;SGB=-113.477;VDB=0.0658347;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2311.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN2311 SNP G -> A AC=2;AN=192;BQB=0.814954;DP=4891;DP4=2297,2201,27,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.13385e-25;MQSB=0.672751;RPB=0.627239;SGB=2.72612;VDB=0.527832;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2456.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN2456 SNP G -> A AC=2;AN=200;BQB=0.909475;DP=4367;DP4=2099,1932,16,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20546e-16;MQSB=0.690805;RPB=0.999999;SGB=127.947;VDB=0.849869;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2658-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.997361;DP=4785;DP4=2270,2214,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26622e-12;MQSB=0.999173;RPB=0.459117;SGB=95.7111;VDB=0.55876;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN3445-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN3445-S SNP G -> A AC=2;AN=184;BQB=0.999998;DP=2832;DP4=1342,1392,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.02958e-08;MQSB=0.585657;RPB=0.96871;SGB=62.3078;VDB=0.184578;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN3599-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN3599-S SNP G -> A AC=2;AN=188;BQB=0.956183;DP=2683;DP4=1229,1364,13,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.15404e-15;MQSB=0.788832;RPB=0.899857;SGB=112.585;VDB=0.329522;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN3946-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN3946-S SNP G -> A AC=2;AN=168;BQB=0.915826;DP=2597;DP4=1212,1258,9,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.89838e-16;MQSB=0.938942;RPB=0.00336089;SGB=58.647;VDB=0.25877;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN474-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN474-S Single Base Substitution G-A INTRON HOMO SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN696-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN696-S Single Base Substitution G-A INTRON HOMO SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN768-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN768-S Single Base Substitution G-A INTRON HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN874-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN874-S Single Base Substitution G-A INTRON HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN975-S.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN975-S Single Base Substitution G-A INTRON HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN_935-1.SNP.11:14480752 chr11:014480752 0 W/14480752-14480752 FN_935-1 Single Base Substitution G-A HET SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN2677-S.SNP.11:14481018 chr11:014481018 0 W/14481018-14481018 FN2677-S SNP C -> T AC=2;AN=200;BQB=0.916597;DP=4555;DP4=2025,2286,14,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000439078;MQB=8.23213e-22;MQSB=0.800567;RPB=1;SGB=173.999;VDB=0.696045;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2268-S.SNP.11:14481079 chr11:014481079 0 W/14481079-14481079 FN2268-S SNP A -> C AC=2;AN=190;BQB=0.511853;DP=4091;DP4=1457,2273,28,33;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0134441;MQB=5.42969e-13;MQSB=2.93063e-17;RPB=0.349116;SGB=231.649;VDB=0.502018;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2541-S.SNP.11:14482559 chr11:014482559 0 W/14482559-14482559 FN2541-S SNP G -> A AC=1;AN=198;BQB=0.95303;DP=3914;DP4=1867,1788,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0794e-10;MQSB=0.975865;RPB=0.92961;SGB=10.9445;VDB=0.222992;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R711W|1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|4|1) FN2534-S.SNP.11:14484586 chr11:014484586 0 W/14484586-14484586 FN2534-S SNP C -> G AC=1;AN=198;BQB=0.913006;DP=4113;DP4=1876,1987,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.01454e-09;MQSB=0.838431;RPB=0.903987;SGB=31.9395;VDB=0.682974;EFF=INTRON(MODIFIER||||1163|LOC_Os11g25400|protein_coding|CODING|LOC_Os11g25400.1|1|1) FN2088-S.SNP.11:14486547 chr11:014486547 0 W/14486547-14486547 FN2088-S SNP G -> C AC=1;AN=168;BQB=0.147267;DP=3489;DP4=1561,1874,14,13;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.00343938;MQB=0.79815;MQSB=0.0903499;RPB=0.317142;SGB=19.9297;VDB=0.668555;EFF=INTERGENIC(MODIFIER||||||||||1) FN1527-S.SNP.11:14494751 chr11:014494751 0 W/14494751-14494751 FN1527-S Single Base Substitution G-A INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN762-S.SNP.11:14499610 chr11:014499610 0 W/14499610-14499610 FN762-S Single Base Substitution G-C INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN519-S.SNP.11:14500467 chr11:014500467 0 W/14500467-14500467 FN519-S Single Base Substitution C-T INTERGENIC HOMO SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN3438-S.SNP.11:14501254 chr11:014501254 0 W/14501254-14501254 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.864449;DP=3762;DP4=2047,1584,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.9697e-14;MQSB=0.979182;RPB=0.613779;SGB=93.9603;VDB=0.291425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A207T|230|LOC_Os11g25440|protein_coding|CODING|LOC_Os11g25440.1|2|1) FN408-S.SNP.11:14504658 chr11:014504658 0 W/14504658-14504658 FN408-S Single Base Substitution T-G INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN458-S.SNP.11:14509417 chr11:014509417 0 W/14509417-14509417 FN458-S Single Base Substitution T-A INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN880-S.SNP.11:14512786 chr11:014512786 0 W/14512786-14512786 FN880-S Single Base Substitution C-T INTRON HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN739-S.SNP.11:14516679 chr11:014516679 0 W/14516679-14516679 FN739-S Single Base Substitution A-G INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN739-S.SNP.11:14516681 chr11:014516681 0 W/14516681-14516681 FN739-S Single Base Substitution T-A INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN739-S.SNP.11:14516682 chr11:014516682 0 W/14516682-14516682 FN739-S Single Base Substitution C-A INTERGENIC HOMO SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3993-S.SNP.11:14522208 chr11:014522208 0 W/14522208-14522208 FN3993-S SNP G -> T AC=2;AN=168;BQB=0.892519;DP=3005;DP4=1557,1282,28,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.05295e-21;MQSB=0.906646;RPB=0.945265;SGB=49.9768;VDB=0.699275;EFF=INTRON(MODIFIER||||97|LOC_Os11g25490|protein_coding|CODING|LOC_Os11g25490.1|1|1) FN846-S.SNP.11:14531398 chr11:014531398 0 W/14531398-14531398 FN846-S Single Base Substitution A-G INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2725-S.SNP.11:14531401 chr11:014531401 0 W/14531401-14531401 FN2725-S SNP G -> T AC=1;AN=200;BQB=0.799268;DP=4920;DP4=2255,2374,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90575e-12;MQSB=0.948769;RPB=0.819605;SGB=61.9006;VDB=0.0503784;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.11:14569501 chr11:014569501 0 W/14569501-14569501 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.734205;DP=4456;DP4=2232,1977,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.51406e-14;MQSB=0.881045;RPB=0.921284;SGB=47.5102;VDB=0.613428;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G447|508|LOC_Os11g25560|protein_coding|CODING|LOC_Os11g25560.1|4|1) FN1471-S.SNP.11:14572788 chr11:014572788 0 W/14572788-14572788 FN1471-S SNP G -> A AC=1;AN=188;BQB=0.258509;DP=3610;DP4=1786,1792,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.79806e-08;MQSB=0.980669;RPB=0.995206;SGB=5.5382;VDB=0.446847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.11:14573368 chr11:014573368 0 W/14573368-14573368 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.38322;DP=4300;DP4=2124,1927,18,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.77032e-14;MQSB=0.977794;RPB=0.547297;SGB=95.5;VDB=0.436153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.11:14576522 chr11:014576522 0 W/14576522-14576522 FN1509-S Single Base Substitution C-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN321-S.SNP.11:14578552 chr11:014578552 0 W/14578552-14578552 FN321-S Single Base Substitution G-A INTERGENIC HET SNo: 316, Mutant_ID: FN321-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN4030-S.SNP.11:14592072 chr11:014592072 0 W/14592072-14592072 FN4030-S SNP T -> A AC=1;AN=168;BQB=0.871662;DP=2776;DP4=1137,1485,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00180115;MQB=0.000159451;MQSB=0.144473;RPB=0.926663;SGB=30.0193;VDB=0.0251785;EFF=INTERGENIC(MODIFIER||||||||||1) FN2444.SNP.11:14594598 chr11:014594598 0 W/14594598-14594598 FN2444 SNP G -> T AC=2;AN=200;BQB=0.774753;DP=4361;DP4=2035,2131,8,19;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00412749;MQB=2.05162e-11;MQSB=0.000587873;RPB=0.25271;SGB=118.737;VDB=0.717558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K607N|1333|LOC_Os11g25590|protein_coding|CODING|LOC_Os11g25590.1|2|1) FN3626-S.SNP.11:14597499 chr11:014597499 0 W/14597499-14597499 FN3626-S SNP A -> T AC=1;AN=190;BQB=0.997843;DP=2637;DP4=877,1572,3,13;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.012135;MQB=0.88832;MQSB=0.341284;RPB=0.507711;SGB=46.7622;VDB=0.269673;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.11:14601258 chr11:014601258 0 W/14601258-14601258 FN1606-S Single Base Substitution T-G INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN4080-S.SNP.11:14602041 chr11:014602041 0 W/14602041-14602041 FN4080-S SNP A -> G AC=1;AN=182;BQB=0.890136;DP=2999;DP4=1274,1656,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.22987e-09;MQSB=0.523491;RPB=0.999994;SGB=66.6657;VDB=0.365321;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.11:14602322 chr11:014602322 0 W/14602322-14602322 FN1282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN780-S.SNP.11:14605784 chr11:014605784 0 W/14605784-14605784 FN780-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g25610 ZOS11-02 - C2H2 zinc finger protein, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1104-S.SNP.11:14622033 chr11:014622033 0 W/14622033-14622033 FN1104-S Single Base Substitution T-A INTRON HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN-184.SNP.11:14623064 chr11:014623064 0 W/14623064-14623064 FN-184 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g25640 retrotransposon protein, putative, unclassified, expressed SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN-132.SNP.11:14623409 chr11:014623409 0 W/14623409-14623409 FN-132 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g25640 retrotransposon protein, putative, unclassified, expressed SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN3983-S.SNP.11:14625178 chr11:014625178 0 W/14625178-14625178 FN3983-S SNP G -> A AC=1;AN=168;BQB=0.940283;DP=2898;DP4=1323,1470,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.72675e-06;MQSB=0.870778;RPB=0.624252;SGB=24.4556;VDB=0.187503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.11:14631357 chr11:014631357 0 W/14631357-14631357 FN3940-S SNP C -> G AC=2;AN=158;BQB=0.855606;DP=2340;DP4=1152,1083,8,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.72352e-08;MQSB=0.998163;RPB=0.991248;SGB=60.1755;VDB=0.342358;EFF=INTERGENIC(MODIFIER||||||||||1) FN2249-S.SNP.11:14636021 chr11:014636021 0 W/14636021-14636021 FN2249-S SNP G -> A AC=1;AN=188;BQB=0.986328;DP=2978;DP4=1470,1227,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=5.82824e-06;MQSB=0.810909;RPB=0.786701;SGB=53.6492;VDB=0.434484;EFF=INTRON(MODIFIER||||233|LOC_Os11g25650|protein_coding|CODING|LOC_Os11g25650.1|1|1) FN4187-S.SNP.11:14642925 chr11:014642925 0 W/14642925-14642925 FN4187-S SNP T -> A AC=2;AN=170;BQB=0.927245;DP=2572;DP4=1325,1154,15,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.86543e-16;MQSB=0.997892;RPB=0.664755;SGB=18.759;VDB=0.52706;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acA|T312|434|LOC_Os11g25660|protein_coding|CODING|LOC_Os11g25660.1|5|1) FN4187-S.SNP.11:14642926 chr11:014642926 0 W/14642926-14642926 FN4187-S SNP T -> A AC=2;AN=170;BQB=0.959517;DP=2586;DP4=1327,1157,14,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.70222e-14;MQSB=0.994123;RPB=0.214815;SGB=72.7472;VDB=0.269451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Aca|S313T|434|LOC_Os11g25660|protein_coding|CODING|LOC_Os11g25660.1|5|1) FN2448.SNP.11:14645671 chr11:014645671 0 W/14645671-14645671 FN2448 SNP T -> G AC=1;AN=200;BQB=0.994164;DP=4630;DP4=2161,2104,6,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.27974e-11;MQSB=0.98059;RPB=0.999928;SGB=11.0951;VDB=0.344306;EFF=INTRON(MODIFIER||||1263|LOC_Os11g25670|protein_coding|CODING|LOC_Os11g25670.1|5|1) FN1741-S.SNP.11:14647895 chr11:014647895 0 W/14647895-14647895 FN1741-S SNP C -> T AC=1;AN=188;BQB=0.0400421;DP=2797;DP4=1406,1312,14,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7635e-15;MQSB=0.930083;RPB=0.982289;SGB=103.498;VDB=0.438002;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W429*|1263|LOC_Os11g25670|protein_coding|CODING|LOC_Os11g25670.1|3|1);LOF=(LOC_Os11g25670|LOC_Os11g25670|1|1.00);NMD=(LOC_Os11g25670|LOC_Os11g25670|1|1.00) FN3534-S.SNP.11:14648047 chr11:014648047 0 W/14648047-14648047 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.138394;DP=2701;DP4=1359,1268,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000370233;MQB=1.61424e-06;MQSB=0.925107;RPB=0.18691;SGB=23.5329;VDB=0.0135764;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D378|1263|LOC_Os11g25670|protein_coding|CODING|LOC_Os11g25670.1|3|1) FN2092-S.SNP.11:14650319 chr11:014650319 0 W/14650319-14650319 FN2092-S SNP G -> A AC=1;AN=168;BQB=0.687053;DP=3000;DP4=1661,1312,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=0.0100033;MQSB=0.462914;RPB=0.938508;SGB=-1.53256;VDB=0.154823;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y135|236|LOC_Os11g25680|protein_coding|CODING|LOC_Os11g25680.1|2|1) FN570-S.SNP.11:14652917 chr11:014652917 0 W/14652917-14652917 FN570-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN570-S.SNP.11:14652921 chr11:014652921 0 W/14652921-14652921 FN570-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN2412.SNP.11:14653027 chr11:014653027 0 W/14653027-14653027 FN2412 SNP C -> A AC=2;AN=200;BQB=0.95384;DP=5061;DP4=2571,2171,25,30;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.0207469;MQB=2.9464e-10;MQSB=0.287557;RPB=0.775143;SGB=128.481;VDB=0.358011;EFF=STOP_GAINED(HIGH|NONSENSE|tCa/tAa|S171*|1115|LOC_Os11g25690|protein_coding|CODING|LOC_Os11g25690.1|3|1);LOF=(LOC_Os11g25690|LOC_Os11g25690|1|1.00);NMD=(LOC_Os11g25690|LOC_Os11g25690|1|1.00) FN3863-S.SNP.11:14653597 chr11:014653597 0 W/14653597-14653597 FN3863-S SNP C -> T AC=2;AN=158;BQB=0.870472;DP=2317;DP4=1017,1197,10,14;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.0056107;MQB=3.96936e-11;MQSB=0.023339;RPB=0.825579;SGB=-42.315;VDB=0.731017;EFF=INTRON(MODIFIER||||1115|LOC_Os11g25690|protein_coding|CODING|LOC_Os11g25690.1|4|1) FN428-S.SNP.11:14656173 chr11:014656173 0 W/14656173-14656173 FN428-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN4312-S.SNP.11:14662231 chr11:014662231 0 W/14662231-14662231 FN4312-S SNP C -> T AC=1;AN=170;BQB=0.490624;DP=2549;DP4=1082,1402,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.7888e-05;MQSB=0.897921;RPB=0.672156;SGB=27.9928;VDB=0.0325049;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A194V|260|LOC_Os11g25700|protein_coding|CODING|LOC_Os11g25700.1|4|1) FN1049-S.SNP.11:14662527 chr11:014662527 0 W/14662527-14662527 FN1049-S Single Base Substitution A-T INTRON HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2682-S.SNP.11:14664421 chr11:014664421 0 W/14664421-14664421 FN2682-S SNP C -> T AC=1;AN=200;BQB=0.91607;DP=4604;DP4=2162,2201,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.18429e-07;MQSB=0.977838;RPB=0.97853;SGB=29.4541;VDB=0.32056;EFF=INTRON(MODIFIER||||168|LOC_Os11g25720|protein_coding|CODING|LOC_Os11g25720.1|1|1) FN579-S.SNP.11:14666749 chr11:014666749 0 W/14666749-14666749 FN579-S Single Base Substitution C-T INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN2639-S.SNP.11:14667233 chr11:014667233 0 W/14667233-14667233 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.555859;DP=4692;DP4=2104,2334,9,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.0029838;MQB=6.69866e-09;MQSB=0.0359145;RPB=0.767799;SGB=63.4749;VDB=0.692856;EFF=INTRON(MODIFIER||||168|LOC_Os11g25720|protein_coding|CODING|LOC_Os11g25720.1|1|1) FN-314.SNP.11:14673737 chr11:014673737 0 W/14673737-14673737 FN-314 Single Base Substitution C-T INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN1129-S.SNP.11:14675683 chr11:014675683 0 W/14675683-14675683 FN1129-S Single Base Substitution A-C INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN2105-S.SNP.11:14678428 chr11:014678428 0 W/14678428-14678428 FN2105-S SNP C -> T AC=2;AN=168;BQB=0.962226;DP=1429;DP4=847,544,4,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.00524e-05;MQSB=0.998199;RPB=0.67321;SGB=21.0249;VDB=0.907304;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.11:14681783 chr11:014681783 0 W/14681783-14681783 FN1670-S SNP C -> A AC=2;AN=188;BQB=0.131161;DP=2232;DP4=1354,820,15,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.07746e-10;MQSB=0.969011;RPB=0.993991;SGB=-39.1914;VDB=0.325692;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.11:14686042 chr11:014686042 0 W/14686042-14686042 FN4030-S SNP C -> T AC=2;AN=168;BQB=0.990471;DP=910;DP4=373,481,3,5;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.0010989;MQB=0.00306988;MQSB=7.62143e-11;RPB=0.972675;SGB=30.0193;VDB=0.0132287;EFF=INTRON(MODIFIER||||301|LOC_Os11g25750|protein_coding|CODING|LOC_Os11g25750.1|2|1) FN469-S.SNP.11:14692782 chr11:014692782 0 W/14692782-14692782 FN469-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g25760 expressed protein SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN-400.SNP.11:14696960 chr11:014696960 0 W/14696960-14696960 FN-400 Single Base Substitution A-G INTERGENIC HOMO SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN553-S.SNP.11:14708198 chr11:014708198 0 W/14708198-14708198 FN553-S Single Base Substitution A-G INTRON HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-95.SNP.11:14710659 chr11:014710659 0 W/14710659-14710659 FN-95 Single Base Substitution A-G INTRON HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1419-S.SNP.11:14711791 chr11:014711791 0 W/14711791-14711791 FN1419-S Single Base Substitution C-G INTRON HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1279-S.SNP.11:14712983 chr11:014712983 0 W/14712983-14712983 FN1279-S Single Base Substitution C-T INTRON HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3506-S.SNP.11:14715129 chr11:014715129 0 W/14715129-14715129 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.899834;DP=2524;DP4=1154,1249,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.42162e-09;MQSB=0.998914;RPB=0.946332;SGB=57.244;VDB=0.932692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.11:14715215 chr11:014715215 0 W/14715215-14715215 FN2315 SNP G -> A AC=1;AN=192;BQB=0.873535;DP=4598;DP4=1987,2248,29,34;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.10873e-36;MQSB=0.568992;RPB=0.99988;SGB=79.3148;VDB=0.434444;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.11:14716611 chr11:014716611 0 W/14716611-14716611 FN-377 Single Base Substitution G-T INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN_543-2-6.SNP.11:14716748 chr11:014716748 0 W/14716748-14716748 FN_543-2-6 Single Base Substitution A-G HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3387-S.SNP.11:14719169 chr11:014719169 0 W/14719169-14719169 FN3387-S SNP C -> A AC=1;AN=184;BQB=0.702741;DP=2657;DP4=1348,1222,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00301091;MQB=0.00051464;MQSB=0.571982;RPB=0.566454;SGB=62.3078;VDB=0.0550357;EFF=INTRON(MODIFIER||||532|LOC_Os11g25810|protein_coding|CODING|LOC_Os11g25810.1|6|1) FN593-S.SNP.11:14719316 chr11:014719316 0 W/14719316-14719316 FN593-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g25810 retrotransposon protein, putative, Ty1-copia subclass SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2408.SNP.11:14725281 chr11:014725281 0 W/14725281-14725281 FN2408 SNP G -> A AC=1;AN=200;BQB=0.324891;DP=4052;DP4=1802,1927,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000246792;MQB=1.13982e-06;MQSB=0.874492;RPB=0.942713;SGB=40.4492;VDB=0.830559;EFF=INTERGENIC(MODIFIER||||||||||1) FN543-S.SNP.11:14727703 chr11:014727703 0 W/14727703-14727703 FN543-S Single Base Substitution G-A INTRON HOMO SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN-274.SNP.11:14729663 chr11:014729663 0 W/14729663-14729663 FN-274 Single Base Substitution G-A INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN1121-S.SNP.11:14729804 chr11:014729804 0 W/14729804-14729804 FN1121-S Single Base Substitution C-T INTERGENIC HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN872-S.SNP.11:14730439 chr11:014730439 0 W/14730439-14730439 FN872-S Single Base Substitution A-C INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN707-S.SNP.11:14732159 chr11:014732159 0 W/14732159-14732159 FN707-S Single Base Substitution G-C INTERGENIC HET SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN1434-S.SNP.11:14734318 chr11:014734318 0 W/14734318-14734318 FN1434-S Single Base Substitution G-A INTRON HET SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2299.SNP.11:14744140 chr11:014744140 0 W/14744140-14744140 FN2299 SNP G -> A AC=2;AN=192;BQB=0.780843;DP=4625;DP4=2471,1883,18,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.08787e-17;MQSB=0.81409;RPB=0.855872;SGB=69.9435;VDB=0.0498813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.11:14751429 chr11:014751429 0 W/14751429-14751429 FN1385-S Single Base Substitution T-A INTRON HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3914-S.SNP.11:14751789 chr11:014751789 0 W/14751789-14751789 FN3914-S SNP C -> T AC=1;AN=158;BQB=0.999584;DP=2693;DP4=1370,1222,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.18705e-06;MQSB=0.981833;RPB=0.635101;SGB=30.704;VDB=0.0290355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S133L|378|LOC_Os11g25880|protein_coding|CODING|LOC_Os11g25880.1|4|1) FN2678-S.SNP.11:14754167 chr11:014754167 0 W/14754167-14754167 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.673279;DP=5273;DP4=2371,2616,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8133e-09;MQSB=0.998714;RPB=0.996945;SGB=21.6694;VDB=0.981198;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.11:14754300 chr11:014754300 0 W/14754300-14754300 FN3056-S SNP G -> A AC=1;AN=184;BQB=0.956357;DP=2850;DP4=1425,1322,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.47665e-05;MQSB=0.983098;RPB=0.0538517;SGB=21.6609;VDB=0.0554472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1655-S.SNP.11:14754728 chr11:014754728 0 W/14754728-14754728 FN1655-S Single Base Substitution C-T INTERGENIC Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1374-S.SNP.11:14760804 chr11:014760804 0 W/14760804-14760804 FN1374-S Single Base Substitution T-C INTERGENIC HET SNo: 1162, Mutant_ID: FN1374-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1723-S.SNP.11:14765388 chr11:014765388 0 W/14765388-14765388 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.949826;DP=2974;DP4=1601,1307,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.71148e-05;MQSB=0.968113;RPB=0.9241;SGB=18.4463;VDB=0.135519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1723-S.SNP.11:14765389 chr11:014765389 0 W/14765389-14765389 FN1723-S SNP G -> A AC=1;AN=188;BQB=0.929224;DP=2977;DP4=1588,1330,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.68786e-06;MQSB=0.967886;RPB=0.995884;SGB=18.4463;VDB=0.213727;EFF=INTERGENIC(MODIFIER||||||||||1) FN1627-S.SNP.11:14770402 chr11:014770402 0 W/14770402-14770402 FN1627-S Single Base Substitution C-T INTERGENIC HET SNo: 1337, Mutant_ID: FN1627-S, Generation: M2, Mutations: 80, Genes: 56, Seed availability: Yes. FN2356.SNP.11:14771380 chr11:014771380 0 W/14771380-14771380 FN2356 SNP G -> A AC=1;AN=192;BQB=0.986914;DP=5028;DP4=2460,2187,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.23083e-08;MQSB=0.695804;RPB=0.806919;SGB=-14.2043;VDB=0.0230057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3916-S.SNP.11:14780400 chr11:014780400 0 W/14780400-14780400 FN3916-S SNP G -> A AC=1;AN=158;BQB=0.871836;DP=2588;DP4=1233,1257,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.72292e-08;MQSB=0.945718;RPB=0.48888;SGB=44.1818;VDB=0.776679;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.11:14780607 chr11:014780607 0 W/14780607-14780607 FN1690-S SNP T -> C AC=1;AN=188;BQB=0.141371;DP=3384;DP4=1725,1622,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.18156e-07;MQSB=0.808654;RPB=0.694962;SGB=8.62479;VDB=0.866788;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.11:14783432 chr11:014783432 0 W/14783432-14783432 FN-104 Single Base Substitution C-A INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN_841-7-2.SNP.11:14790344 chr11:014790344 0 W/14790344-14790344 FN_841-7-2 Single Base Substitution A-G Homo SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN2448.SNP.11:14790543 chr11:014790543 0 W/14790543-14790543 FN2448 SNP T -> A AC=1;AN=200;BQB=0.701393;DP=4279;DP4=2255,1789,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.11881e-07;MQSB=0.998953;RPB=0.99751;SGB=49.6594;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.11:14793118 chr11:014793118 0 W/14793118-14793118 FN2123-S SNP G -> A AC=1;AN=168;BQB=0.959903;DP=2381;DP4=1271,1058,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.29011e-07;MQSB=0.990537;RPB=0.999871;SGB=22.1847;VDB=0.68611;EFF=INTRON(MODIFIER||||936|LOC_Os11g25930|protein_coding|CODING|LOC_Os11g25930.1|1|1) FN3347-S.SNP.11:14793510 chr11:014793510 0 W/14793510-14793510 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.667633;DP=3894;DP4=1982,1800,18,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.78273e-12;MQSB=0.980683;RPB=0.488232;SGB=81.5311;VDB=0.98771;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D365|936|LOC_Os11g25930|protein_coding|CODING|LOC_Os11g25930.1|2|1) FN1221-S.SNP.11:14794103 chr11:014794103 0 W/14794103-14794103 FN1221-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g25930 retrotransposon protein, putative, unclassified SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1279-S.SNP.11:14799368 chr11:014799368 0 W/14799368-14799368 FN1279-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g25950 retrotransposon protein, putative, unclassified, expressed SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2160-S.SNP.11:14800035 chr11:014800035 0 W/14800035-14800035 FN2160-S SNP G -> A AC=1;AN=168;BQB=0.21946;DP=2103;DP4=1143,891,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00192289;MQSB=0.542495;RPB=0.962393;SGB=-18.819;VDB=0.682972;EFF=INTRON(MODIFIER||||658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|2|1) FN2233-S.SNP.11:14800214 chr11:014800214 0 W/14800214-14800214 FN2233-S SNP C -> T AC=1;AN=188;BQB=0.870781;DP=4035;DP4=1731,2067,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.00303067;MQSB=0.0347416;RPB=0.479455;SGB=39.9877;VDB=0.251186;EFF=INTRON(MODIFIER||||658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|2|1) FN3295-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN3295-S SNP G -> A AC=1;AN=184;BQB=0.893203;DP=3179;DP4=1521,1539,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.05862e-06;MQSB=0.842686;RPB=0.862011;SGB=39.699;VDB=0.800627;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A208|658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|1|1) FN3503-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.998231;DP=3072;DP4=1474,1521,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.51026e-06;MQSB=0.722374;RPB=0.976248;SGB=44.4357;VDB=0.993137;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A208|658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|1|1) FN3974-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN3974-S SNP G -> A AC=2;AN=168;BQB=0.960645;DP=2659;DP4=1241,1276,12,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.67e-12;MQSB=0.716799;RPB=0.897135;SGB=79.3486;VDB=0.250091;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A208|658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|1|1) FN4088-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN4088-S SNP G -> A AC=2;AN=182;BQB=0.999737;DP=2945;DP4=1456,1387,12,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.24789e-14;MQSB=0.867079;RPB=0.903757;SGB=77.758;VDB=0.0778291;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A208|658|LOC_Os11g25950|protein_coding|CODING|LOC_Os11g25950.1|1|1) FN449-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN449-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN521-S.SNP.11:14800675 chr11:014800675 0 W/14800675-14800675 FN521-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3457-S.SNP.11:14805201 chr11:014805201 0 W/14805201-14805201 FN3457-S SNP C -> T AC=1;AN=184;BQB=0.994153;DP=3395;DP4=1466,1835,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.2553e-11;MQSB=0.99889;RPB=0.510018;SGB=60.4004;VDB=0.152276;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.11:14812385 chr11:014812385 0 W/14812385-14812385 FN-256 Single Base Substitution G-A INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN867-S.SNP.11:14813789 chr11:014813789 0 W/14813789-14813789 FN867-S Single Base Substitution G-T INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN1536-S.SNP.11:14814379 chr11:014814379 0 W/14814379-14814379 FN1536-S Single Base Substitution A-T INTERGENIC Homo SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN1196-S.SNP.11:14821573 chr11:014821573 0 W/14821573-14821573 FN1196-S Single Base Substitution C-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN4314-S.SNP.11:14830357 chr11:014830357 0 W/14830357-14830357 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.487308;DP=2356;DP4=1226,1064,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52609e-07;MQSB=0.896623;RPB=0.927451;SGB=48.6486;VDB=0.485196;EFF=INTRON(MODIFIER||||1107|LOC_Os11g25980|protein_coding|CODING|LOC_Os11g25980.1|6|1),INTRON(MODIFIER||||1039|LOC_Os11g25980|protein_coding|CODING|LOC_Os11g25980.2|6|1) FN-66.SNP.11:14835925 chr11:014835925 0 W/14835925-14835925 FN-66 Single Base Substitution A-T INTRON HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2602-S.SNP.11:14848925 chr11:014848925 0 W/14848925-14848925 FN2602-S SNP G -> T AC=1;AN=198;BQB=0.845098;DP=4015;DP4=2002,1790,12,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14994e-06;MQSB=0.980602;RPB=0.925934;SGB=40.149;VDB=0.778595;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G272|504|LOC_Os11g25990|protein_coding|CODING|LOC_Os11g25990.1|1|1) FN1182-S.SNP.11:14851168 chr11:014851168 0 W/14851168-14851168 FN1182-S Single Base Substitution T-A INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2659-S.SNP.11:14852190 chr11:014852190 0 W/14852190-14852190 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.817979;DP=4985;DP4=2460,2247,7,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000122733;MQSB=0.702899;RPB=0.677868;SGB=25.849;VDB=0.731986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2432.SNP.11:14860510 chr11:014860510 0 W/14860510-14860510 FN2432 SNP T -> A AC=2;AN=200;BQB=0.239016;DP=4821;DP4=2129,2102,18,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.9783e-17;MQSB=0.983172;RPB=0.981698;SGB=-80.6278;VDB=0.637519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1614-S.SNP.11:14869474 chr11:014869474 0 W/14869474-14869474 FN1614-S Single Base Substitution A-T INTERGENIC Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1106-S.SNP.11:14878371 chr11:014878371 0 W/14878371-14878371 FN1106-S Single Base Substitution T-A INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2372.SNP.11:14879432 chr11:014879432 0 W/14879432-14879432 FN2372 SNP A -> T AC=1;AN=192;BQB=0.125786;DP=4832;DP4=2508,2018,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.29751e-09;MQSB=0.994707;RPB=0.992596;SGB=-12.5113;VDB=0.862253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1647-S.SNP.11:14880219 chr11:014880219 0 W/14880219-14880219 FN1647-S Single Base Substitution T-C INTERGENIC HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN3386-S.SNP.11:14882759 chr11:014882759 0 W/14882759-14882759 FN3386-S SNP C -> T AC=1;AN=184;BQB=0.998727;DP=3075;DP4=1370,1583,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.55078e-07;MQSB=0.73396;RPB=0.603648;SGB=53.2642;VDB=0.0791717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3521-S.SNP.11:14883567 chr11:014883567 0 W/14883567-14883567 FN3521-S SNP C -> T AC=1;AN=188;BQB=0.763866;DP=4097;DP4=2184,1736,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.21954e-08;MQSB=0.757307;RPB=0.792704;SGB=46.6141;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.11:14886997 chr11:014886997 0 W/14886997-14886997 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.782686;DP=3713;DP4=1816,1853,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.50356e-10;MQSB=0.986327;RPB=0.923775;SGB=-70.6427;VDB=0.0368205;EFF=INTRON(MODIFIER||||370|LOC_Os11g26030|protein_coding|CODING|LOC_Os11g26030.1|5|1) FN1737-S.SNP.11:14886998 chr11:014886998 0 W/14886998-14886998 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.910514;DP=3725;DP4=1812,1871,13,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.19779e-12;MQSB=0.983348;RPB=0.881199;SGB=-70.6427;VDB=0.211935;EFF=INTRON(MODIFIER||||370|LOC_Os11g26030|protein_coding|CODING|LOC_Os11g26030.1|5|1) FN2081-S.SNP.11:14894212 chr11:014894212 0 W/14894212-14894212 FN2081-S SNP G -> A AC=1;AN=168;BQB=0.00965038;DP=2538;DP4=1768,541,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00275808;MQB=0.0589539;MQSB=0;RPB=0.271697;SGB=-154.912;VDB=0.699439;EFF=INTERGENIC(MODIFIER||||||||||1) 704-4-3.SNP.11:14894290 chr11:014894290 0 W/14894290-14894290 704-4-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. 704-4-3.SNP.11:14894291 chr11:014894291 0 W/14894291-14894291 704-4-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. FN1006-S.SNP.11:14897044 chr11:014897044 0 W/14897044-14897044 FN1006-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g26040 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2794-S.SNP.11:14897668 chr11:014897668 0 W/14897668-14897668 FN2794-S SNP G -> C AC=1;AN=198;BQB=0.860398;DP=4025;DP4=1831,1923,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00124224;MQB=1.8037e-06;MQSB=0.982988;RPB=0.81025;SGB=4.56404;VDB=0.0977395;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R757T|868|LOC_Os11g26040|protein_coding|CODING|LOC_Os11g26040.1|3|1) FN1293-S.SNP.11:14903257 chr11:014903257 0 W/14903257-14903257 FN1293-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g26050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN835-S.SNP.11:14905592 chr11:014905592 0 W/14905592-14905592 FN835-S Single Base Substitution T-A INTERGENIC HOMO SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN4083-S.SNP.11:14906071 chr11:014906071 0 W/14906071-14906071 FN4083-S SNP G -> A AC=1;AN=182;BQB=0.993934;DP=3024;DP4=1445,1518,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00198413;MQB=0.000597207;MQSB=0.992378;RPB=0.623746;SGB=53.1331;VDB=0.220473;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A109V|234|LOC_Os11g26060|protein_coding|CODING|LOC_Os11g26060.1|2|1) FN2164-S.SNP.11:14908508 chr11:014908508 0 W/14908508-14908508 FN2164-S SNP A -> C AC=2;AN=168;BQB=0.716062;DP=3512;DP4=1923,1532,20,19;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.0281891;MQB=1.13071e-10;MQSB=0.979355;RPB=0.827953;SGB=37.0995;VDB=0.656943;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Cat|N88H|602|LOC_Os11g26070|protein_coding|CODING|LOC_Os11g26070.1|1|1) FN2164-S.SNP.11:14908510 chr11:014908510 0 W/14908510-14908510 FN2164-S SNP T -> C AC=2;AN=168;BQB=0.0736352;DP=3526;DP4=1924,1539,19,25;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.028928;MQB=6.77216e-11;MQSB=0.923223;RPB=0.571634;SGB=-149.446;VDB=0.3889;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N88|602|LOC_Os11g26070|protein_coding|CODING|LOC_Os11g26070.1|1|1) FN1122-S.SNP.11:14911105 chr11:014911105 0 W/14911105-14911105 FN1122-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN919-S.SNP.11:14914276 chr11:014914276 0 W/14914276-14914276 FN919-S Single Base Substitution C-T INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2790-S.SNP.11:14918136 chr11:014918136 0 W/14918136-14918136 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.839099;DP=4472;DP4=2165,2075,12,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.6734e-07;MQSB=0.0803995;RPB=0.99147;SGB=40.149;VDB=0.700181;EFF=INTRON(MODIFIER||||484|LOC_Os11g26080|protein_coding|CODING|LOC_Os11g26080.1|1|1) FN1448-S.SNP.11:14918880 chr11:014918880 0 W/14918880-14918880 FN1448-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g26080 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1470-S.SNP.11:14920330 chr11:014920330 0 W/14920330-14920330 FN1470-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2399.SNP.11:14927949 chr11:014927949 0 W/14927949-14927949 FN2399 SNP A -> G AC=1;AN=200;BQB=0.318031;DP=4267;DP4=1947,2064,6,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00351535;MQB=2.27004e-06;MQSB=0.0415741;RPB=0.66491;SGB=24.2746;VDB=0.86715;EFF=INTRON(MODIFIER||||933|LOC_Os11g26090|protein_coding|CODING|LOC_Os11g26090.1|2|1) FN2399.SNP.11:14927952 chr11:014927952 0 W/14927952-14927952 FN2399 SNP G -> A AC=1;AN=200;BQB=0.454052;DP=4274;DP4=2007,2086,6,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00280767;MQB=1.01411e-07;MQSB=0.1687;RPB=0.255422;SGB=54.2646;VDB=0.644969;EFF=INTRON(MODIFIER||||933|LOC_Os11g26090|protein_coding|CODING|LOC_Os11g26090.1|2|1) FN-112.SNP.11:14928661 chr11:014928661 0 W/14928661-14928661 FN-112 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g26090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 112, Mutant_ID: FN-112, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN3354-S.SNP.11:14930964 chr11:014930964 0 W/14930964-14930964 FN3354-S SNP A -> T AC=1;AN=184;BQB=0.955308;DP=3176;DP4=1709,1339,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00220403;MQB=5.33857e-07;MQSB=2.12976e-09;RPB=0.999997;SGB=11.3677;VDB=0.742236;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.11:14932308 chr11:014932308 0 W/14932308-14932308 FN1243-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-202.SNP.11:14936758 chr11:014936758 0 W/14936758-14936758 FN-202 Single Base Substitution G-C INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN1540-S.SNP.11:14940458 chr11:014940458 0 W/14940458-14940458 FN1540-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os11g26110 retrotransposon protein, putative, unclassified, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN455-S.SNP.11:14940458 chr11:014940458 0 W/14940458-14940458 FN455-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g26110 retrotransposon protein, putative, unclassified, expressed SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN2447.SNP.11:14950005 chr11:014950005 0 W/14950005-14950005 FN2447 SNP G -> C AC=1;AN=200;BQB=0.735161;DP=4876;DP4=2053,2418,9,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205086;MQB=2.79247e-13;MQSB=0.821607;RPB=0.992521;SGB=17.5158;VDB=0.682601;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.11:14952169 chr11:014952169 0 W/14952169-14952169 FN3607-S SNP T -> C AC=1;AN=190;BQB=0.756429;DP=2516;DP4=1051,1313,14,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00119237;MQB=3.66128e-08;MQSB=0.126806;RPB=0.799389;SGB=57.4238;VDB=0.540618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.11:14958841 chr11:014958841 0 W/14958841-14958841 FN3064-S SNP G -> A AC=1;AN=184;BQB=0.49724;DP=2941;DP4=1689,1147,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57259e-07;MQSB=0.978275;RPB=0.74054;SGB=44.2207;VDB=0.756925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3064-S.SNP.11:14958842 chr11:014958842 0 W/14958842-14958842 FN3064-S SNP C -> T AC=1;AN=184;BQB=0.916737;DP=2939;DP4=1679,1153,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67124e-07;MQSB=0.99097;RPB=0.79441;SGB=44.2207;VDB=0.750606;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.11:14959101 chr11:014959101 0 W/14959101-14959101 FN3862-S SNP G -> C AC=2;AN=158;BQB=0.995356;DP=2604;DP4=1298,1213,13,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.68962e-13;MQSB=0.965254;RPB=0.985184;SGB=67.7679;VDB=0.308898;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.11:14964154 chr11:014964154 0 W/14964154-14964154 FN1429-S Single Base Substitution A-T INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1429-S.SNP.11:14964155 chr11:014964155 0 W/14964155-14964155 FN1429-S Single Base Substitution A-T INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3951-S.SNP.11:14974412 chr11:014974412 0 W/14974412-14974412 FN3951-S SNP A -> G AC=1;AN=168;BQB=0.998601;DP=2226;DP4=864,1199,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.048e-09;MQSB=0.998563;RPB=0.494677;SGB=27.0464;VDB=0.109184;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S45|266|LOC_Os11g26150|protein_coding|CODING|LOC_Os11g26150.1|1|1) FN-410.SNP.11:14974571 chr11:014974571 0 W/14974571-14974571 FN-410 Single Base Substitution G-A UTR_5_PRIME HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN-248.SNP.11:14995971 chr11:014995971 0 W/14995971-14995971 FN-248 Single Base Substitution C-A INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN4325-S.SNP.11:15001247 chr11:015001247 0 W/15001247-15001247 FN4325-S SNP A -> G AC=1;AN=170;BQB=0.657132;DP=1369;DP4=832,492,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.002749;MQSB=0.976735;RPB=0.361438;SGB=30.1021;VDB=0.738388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.11:15002285 chr11:015002285 0 W/15002285-15002285 FN2620-S SNP A -> G AC=1;AN=198;BQB=0.028515;DP=4140;DP4=1880,2013,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.0368e-05;MQSB=0.666596;RPB=0.999966;SGB=21.559;VDB=0.366444;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.11:15003291 chr11:015003291 0 W/15003291-15003291 W22-2-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN4260-S.SNP.11:15009098 chr11:015009098 0 W/15009098-15009098 FN4260-S SNP A -> G AC=1;AN=170;BQB=0.991458;DP=2545;DP4=1353,982,15,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.34522e-10;MQSB=0.895091;RPB=0.824002;SGB=78.9707;VDB=0.0749434;EFF=INTERGENIC(MODIFIER||||||||||1) FN894-S.SNP.11:15012105 chr11:015012105 0 W/15012105-15012105 FN894-S Single Base Substitution T-A INTRON HOMO SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN2690-S.SNP.11:15013576 chr11:015013576 0 W/15013576-15013576 FN2690-S SNP G -> A AC=2;AN=200;BQB=0.543334;DP=5091;DP4=2186,2527,18,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.00196425;MQB=3.12874e-18;MQSB=0.658238;RPB=0.929984;SGB=155.578;VDB=0.953952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A151T|238|LOC_Os11g26220|protein_coding|CODING|LOC_Os11g26220.1|4|1) FN1458-S.SNP.11:15014208 chr11:015014208 0 W/15014208-15014208 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1175-S.SNP.11:15015015 chr11:015015015 0 W/15015015-15015015 FN1175-S Single Base Substitution C-A INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2690-S.SNP.11:15016129 chr11:015016129 0 W/15016129-15016129 FN2690-S SNP A -> G AC=1;AN=200;BQB=0.980495;DP=6027;DP4=3231,2581,10,6;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.371163;MQB=0.00971485;MQSB=0;RPB=0.732679;SGB=68.0801;VDB=0.606239;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.11:15024031 chr11:015024031 0 W/15024031-15024031 FN2397 SNP C -> T AC=2;AN=200;BQB=0.997443;DP=4352;DP4=2410,1742,26,19;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0.00919118;MQB=0.984317;MQSB=0.902592;RPB=0.962476;SGB=152.03;VDB=0.718992;EFF=INTERGENIC(MODIFIER||||||||||1) FN1034-S.SNP.11:15024658 chr11:015024658 0 W/15024658-15024658 FN1034-S Single Base Substitution T-G INTERGENIC HET SNo: 930, Mutant_ID: FN1034-S, Generation: M2, Mutations: 44, Genes: 34, Seed availability: Yes. FN2724-S.SNP.11:15025330 chr11:015025330 0 W/15025330-15025330 FN2724-S SNP G -> A AC=1;AN=200;BQB=0.97553;DP=4692;DP4=2118,2265,11,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000426257;MQB=2.43481e-16;MQSB=0.280136;RPB=0.196011;SGB=-130.67;VDB=0.933041;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.11:15035955 chr11:015035955 0 W/15035955-15035955 FN632-S Single Base Substitution G-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1286-S.SNP.11:15036716 chr11:015036716 0 W/15036716-15036716 FN1286-S Single Base Substitution T-G INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN1064-S.SNP.11:15039282 chr11:015039282 0 W/15039282-15039282 FN1064-S Single Base Substitution T-C INTERGENIC HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN2083-S.SNP.11:15039403 chr11:015039403 0 W/15039403-15039403 FN2083-S SNP C -> G AC=1;AN=168;BQB=0.563704;DP=7908;DP4=3484,4043,257,74;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000379363;MQB=0;MQSB=0.0328865;RPB=0;SGB=-5612.72;VDB=4.2039e-45;EFF=INTERGENIC(MODIFIER||||||||||1) FN495-S.SNP.11:15044954 chr11:015044954 0 W/15044954-15044954 FN495-S Single Base Substitution C-A INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN891-S.SNP.11:15045217 chr11:015045217 0 W/15045217-15045217 FN891-S Single Base Substitution C-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN2476.SNP.11:15045416 chr11:015045416 0 W/15045416-15045416 FN2476 SNP C -> T AC=1;AN=200;BQB=0.107235;DP=3529;DP4=1771,1583,11,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000566733;MQB=1.09295e-07;MQSB=0.479535;RPB=0.875719;SGB=63.4749;VDB=0.0454164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.11:15052635 chr11:015052635 0 W/15052635-15052635 FN2212-S SNP G -> A AC=1;AN=190;BQB=0.497947;DP=4290;DP4=1983,1859,22,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.69293e-16;MQSB=0.722828;RPB=0.878301;SGB=132.055;VDB=0.621583;EFF=INTERGENIC(MODIFIER||||||||||1) FN1455-S.SNP.11:15054832 chr11:015054832 0 W/15054832-15054832 FN1455-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3452-S.SNP.11:15058508 chr11:015058508 0 W/15058508-15058508 FN3452-S SNP G -> A AC=2;AN=184;BQB=0.970369;DP=2648;DP4=1397,1154,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.22832e-11;MQSB=0.986689;RPB=0.214721;SGB=93.9603;VDB=0.0741668;EFF=INTRON(MODIFIER||||857|LOC_Os11g26300|protein_coding|CODING|LOC_Os11g26300.1|2|1) FN2179-S.SNP.11:15059709 chr11:015059709 0 W/15059709-15059709 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.554871;DP=1891;DP4=744,1099,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000205954;MQSB=0.964082;RPB=0.703748;SGB=24.4556;VDB=0.366223;EFF=INTRON(MODIFIER||||857|LOC_Os11g26300|protein_coding|CODING|LOC_Os11g26300.1|2|1) FN-332.SNP.11:15059845 chr11:015059845 0 W/15059845-15059845 FN-332 Single Base Substitution C-A INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3851-S.SNP.11:15061182 chr11:015061182 0 W/15061182-15061182 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.886868;DP=2638;DP4=1439,1104,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.14613e-06;MQSB=0.948742;RPB=0.99738;SGB=38.3284;VDB=0.737658;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P213L|857|LOC_Os11g26300|protein_coding|CODING|LOC_Os11g26300.1|2|1) FN1106-S.SNP.11:15061272 chr11:015061272 0 W/15061272-15061272 FN1106-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g26300 transposon protein, putative, unclassified, expressed SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2387.SNP.11:15062235 chr11:015062235 0 W/15062235-15062235 FN2387 SNP G -> T AC=1;AN=192;BQB=0.864428;DP=4984;DP4=2454,2199,12,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.93855e-10;MQSB=0.912932;RPB=0.323201;SGB=67.4678;VDB=0.215289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2550-S.SNP.11:15063099 chr11:015063099 0 W/15063099-15063099 FN2550-S SNP A -> G AC=1;AN=198;BQB=0.981077;DP=4394;DP4=2107,2029,1,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.33655e-06;MQSB=0.797558;RPB=0.982648;SGB=35.7638;VDB=0.738889;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.11:15066705 chr11:015066705 0 W/15066705-15066705 FN1156-XA21 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN2362.SNP.11:15069418 chr11:015069418 0 W/15069418-15069418 FN2362 SNP G -> A AC=2;AN=192;BQB=0.861014;DP=4488;DP4=2385,1842,13,11;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.94158e-12;MQSB=0.99576;RPB=0.980641;SGB=103.983;VDB=0.698208;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.11:15069529 chr11:015069529 0 W/15069529-15069529 FN4064-S SNP A -> G AC=1;AN=168;BQB=0.974763;DP=2399;DP4=1164,1136,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.04291e-06;MQSB=0.970467;RPB=0.647095;SGB=31.3172;VDB=0.217648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1285-S.SNP.11:15070632 chr11:015070632 0 W/15070632-15070632 FN1285-S Single Base Substitution G-A INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2667-S.SNP.11:15078255 chr11:015078255 0 W/15078255-15078255 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.983214;DP=4840;DP4=2639,1887,5,9;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.502066;MQB=0.247931;MQSB=0;RPB=0.834762;SGB=40.2696;VDB=0.0991018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.11:15080814 chr11:015080814 0 W/15080814-15080814 FN3981-S SNP G -> C AC=2;AN=168;BQB=0.0208257;DP=2948;DP4=1395,1450,6,13;HOB=0.0235261;ICB=0.494119;MQ=26;MQ0F=0.173677;MQB=0.440835;MQSB=9.21441e-15;RPB=0.102245;SGB=8.48315;VDB=0.323275;EFF=INTRON(MODIFIER||||204|LOC_Os11g26350|protein_coding|CODING|LOC_Os11g26350.1|5|1) FN-26.SNP.11:15091032 chr11:015091032 0 W/15091032-15091032 FN-26 Single Base Substitution T-A INTERGENIC Homo SNo: 26, Mutant_ID: FN-26, Generation: M2, Mutations: 29, Genes: 35, Seed availability: Yes. FN2089-S.SNP.11:15092255 chr11:015092255 0 W/15092255-15092255 FN2089-S SNP C -> A AC=1;AN=168;BQB=0.551959;DP=3349;DP4=1647,1667,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=36;MQ0F=0.0152284;MQB=0.698466;MQSB=0.564302;RPB=0.854831;SGB=-68.0681;VDB=0.382548;EFF=INTERGENIC(MODIFIER||||||||||1) FN3469-S.SNP.11:15094704 chr11:015094704 0 W/15094704-15094704 FN3469-S SNP C -> T AC=1;AN=184;BQB=0.991637;DP=4583;DP4=2041,2359,9,16;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00174558;MQB=7.31612e-12;MQSB=0.457327;RPB=0.268525;SGB=107.526;VDB=0.913699;EFF=INTERGENIC(MODIFIER||||||||||1) FN-252.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN-252 Single Base Substitution C-T INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN1472-S.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN1472-S Single Base Substitution C-T INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN3920-S.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN3920-S SNP C -> T AC=1;AN=158;BQB=0.944064;DP=3150;DP4=1334,1620,9,20;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0371429;MQB=0.208371;MQSB=9.8254e-12;RPB=0.99954;SGB=87.9846;VDB=0.84104;EFF=INTERGENIC(MODIFIER||||||||||1) FN523-S.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN523-S Single Base Substitution C-T INTERGENIC HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN532-S Single Base Substitution C-T INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN890-S.SNP.11:15096452 chr11:015096452 0 W/15096452-15096452 FN890-S Single Base Substitution C-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN550-S.SNP.11:15097574 chr11:015097574 0 W/15097574-15097574 FN550-S Single Base Substitution C-T INTERGENIC HET SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN1481-S.SNP.11:15098597 chr11:015098597 0 W/15098597-15098597 FN1481-S Single Base Substitution T-C INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1340-S.SNP.11:15099185 chr11:015099185 0 W/15099185-15099185 FN1340-S Single Base Substitution C-T INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1316-S.SNP.11:15104297 chr11:015104297 0 W/15104297-15104297 FN1316-S Single Base Substitution T-C INTRON HET SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN2199-S.SNP.11:15109520 chr11:015109520 0 W/15109520-15109520 FN2199-S SNP C -> T AC=1;AN=190;BQB=0.606754;DP=5088;DP4=2520,2294,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.69423e-07;MQSB=0.965929;RPB=0.795314;SGB=36.1006;VDB=0.868837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.11:15112535 chr11:015112535 0 W/15112535-15112535 FN2673-S SNP G -> T AC=1;AN=200;BQB=0.881946;DP=4476;DP4=1842,2338,5,10;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.0728329;MQB=0.939551;MQSB=0;RPB=0.861021;SGB=63.4749;VDB=0.226635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.11:15114324 chr11:015114324 0 W/15114324-15114324 FN3951-S SNP A -> G AC=1;AN=168;BQB=0.907942;DP=2620;DP4=1352,1128,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.94154e-09;MQSB=0.894652;RPB=0.0967132;SGB=41.6096;VDB=0.022797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S329P|336|LOC_Os11g26390|protein_coding|CODING|LOC_Os11g26390.1|1|1) FN1606-S.SNP.11:15118666 chr11:015118666 0 W/15118666-15118666 FN1606-S Single Base Substitution G-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN-136.SNP.11:15118727 chr11:015118727 0 W/15118727-15118727 FN-136 Single Base Substitution C-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-136.SNP.11:15118728 chr11:015118728 0 W/15118728-15118728 FN-136 Single Base Substitution C-T INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2392.SNP.11:15123266 chr11:015123266 0 W/15123266-15123266 FN2392 SNP A -> T AC=2;AN=200;BQB=0.615529;DP=4543;DP4=2057,2170,27,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.13912e-26;MQSB=0.996322;RPB=0.999914;SGB=166.451;VDB=0.714399;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.11:15125603 chr11:015125603 0 W/15125603-15125603 FN4147-S SNP C -> T AC=2;AN=170;BQB=0.981053;DP=2118;DP4=939,1094,11,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.57825e-11;MQSB=0.670703;RPB=0.436256;SGB=83.4133;VDB=0.25676;EFF=INTERGENIC(MODIFIER||||||||||1) FN1657-S.SNP.11:15126081 chr11:015126081 0 W/15126081-15126081 FN1657-S Single Base Substitution G-A INTERGENIC HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN3939-S.SNP.11:15133454 chr11:015133454 0 W/15133454-15133454 FN3939-S SNP G -> A AC=1;AN=158;BQB=0.73448;DP=2552;DP4=1084,1378,7,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.57162e-07;MQSB=0.895111;RPB=0.112785;SGB=55.806;VDB=0.296558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.11:15135673 chr11:015135673 0 W/15135673-15135673 FN1058-S Single Base Substitution C-T INTERGENIC HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1175-S.SNP.11:15141761 chr11:015141761 0 W/15141761-15141761 FN1175-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g26440 retrotransposon, putative, centromere-specific, expressed SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1269-S.SNP.11:15143984 chr11:015143984 0 W/15143984-15143984 FN1269-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g26450 retrotransposon, putative, centromere-specific SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN3932-S.SNP.11:15144387 chr11:015144387 0 W/15144387-15144387 FN3932-S SNP C -> A AC=1;AN=158;BQB=0.886112;DP=2534;DP4=1174,1266,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.28309e-07;MQSB=0.974753;RPB=0.889552;SGB=37.4429;VDB=0.932552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P306Q|388|LOC_Os11g26450|protein_coding|CODING|LOC_Os11g26450.1|2|1) FN-368.SNP.11:15146309 chr11:015146309 0 W/15146309-15146309 FN-368 Single Base Substitution A-G INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN3725-S.SNP.11:15147106 chr11:015147106 0 W/15147106-15147106 FN3725-S SNP C -> T AC=1;AN=190;BQB=0.939968;DP=2553;DP4=1183,1302,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.15026e-06;MQSB=0.796322;RPB=0.152327;SGB=39.9877;VDB=0.021643;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.11:15147368 chr11:015147368 0 W/15147368-15147368 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.567613;DP=5238;DP4=2404,2473,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000572738;MQB=4.89735e-08;MQSB=1.91076e-07;RPB=0.97538;SGB=43.2083;VDB=0.495236;EFF=INTERGENIC(MODIFIER||||||||||1) FN509-S.SNP.11:15161256 chr11:015161256 0 W/15161256-15161256 FN509-S Single Base Substitution C-G INTERGENIC HOMO SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN799-S.SNP.11:15167024 chr11:015167024 0 W/15167024-15167024 FN799-S Single Base Substitution C-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN836-S.SNP.11:15167928 chr11:015167928 0 W/15167928-15167928 FN836-S Single Base Substitution A-C INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1563-S.SNP.11:15168301 chr11:015168301 0 W/15168301-15168301 FN1563-S Single Base Substitution A-G INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN354-S.SNP.11:15171541 chr11:015171541 0 W/15171541-15171541 FN354-S Single Base Substitution T-A INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3834-S.SNP.11:15173681 chr11:015173681 0 W/15173681-15173681 FN3834-S SNP T -> A AC=2;AN=190;BQB=0.948839;DP=2420;DP4=1254,1092,14,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31103e-12;MQSB=0.993691;RPB=0.975566;SGB=68.0854;VDB=0.880738;EFF=INTERGENIC(MODIFIER||||||||||1) FN3442-S.SNP.11:15174798 chr11:015174798 0 W/15174798-15174798 FN3442-S SNP T -> A AC=2;AN=184;BQB=0.373151;DP=3367;DP4=1224,2004,14,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.03527e-16;MQSB=0.997705;RPB=0.64906;SGB=37.2381;VDB=0.685929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.11:15175691 chr11:015175691 0 W/15175691-15175691 FN1561-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g26480 retrotransposon, putative, centromere-specific SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3838-S.SNP.11:15175928 chr11:015175928 0 W/15175928-15175928 FN3838-S SNP G -> A AC=1;AN=190;BQB=0.923934;DP=3050;DP4=1395,1570,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31324e-07;MQSB=0.995315;RPB=0.730383;SGB=49.0954;VDB=0.353483;EFF=INTRON(MODIFIER||||417|LOC_Os11g26480|protein_coding|CODING|LOC_Os11g26480.1|2|1) FN754-S.SNP.11:15176324 chr11:015176324 0 W/15176324-15176324 FN754-S Single Base Substitution A-T INTRON HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-205.SNP.11:15179083 chr11:015179083 0 W/15179083-15179083 FN-205 Single Base Substitution A-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN2498.SNP.11:15179970 chr11:015179970 0 W/15179970-15179970 FN2498 SNP C -> T AC=1;AN=200;BQB=0.511345;DP=3105;DP4=1241,1476,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.53097e-05;MQSB=0.45429;RPB=0.997417;SGB=-1.74624;VDB=0.418569;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN-394 Single Base Substitution G-A INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN1045-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1045-S Single Base Substitution G-A INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1416-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1416-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN1483-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1526-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1526-S Single Base Substitution G-A INTERGENIC HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1640-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1640-S Single Base Substitution G-A INTERGENIC HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1719-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN1719-S SNP G -> A AC=2;AN=188;BQB=0.0372778;DP=1496;DP4=793,661,5,7;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000668449;MQB=0.0109831;MQSB=0.936254;RPB=0.628318;SGB=-17.1729;VDB=0.717018;EFF=INTERGENIC(MODIFIER||||||||||1) FN2119-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN2119-S SNP G -> A AC=2;AN=168;BQB=0.999896;DP=1773;DP4=905,821,10,9;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.50636e-06;MQSB=0.645935;RPB=0.427692;SGB=31.908;VDB=0.495194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN2326 SNP G -> A AC=2;AN=192;BQB=0.711305;DP=4400;DP4=1714,2413,15,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000227273;MQB=1.69403e-17;MQSB=0.902214;RPB=0.978913;SGB=75.0722;VDB=0.653527;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.916765;DP=3221;DP4=1192,1879,11,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.39233e-17;MQSB=0.93862;RPB=0.791389;SGB=134.656;VDB=0.414854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3659-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.999613;DP=1985;DP4=764,1126,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.59342e-07;MQSB=0.982716;RPB=0.906794;SGB=28.9929;VDB=0.343845;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN4064-S SNP G -> A AC=1;AN=168;BQB=0.988793;DP=2052;DP4=735,1202,3,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000422298;MQSB=0.865713;RPB=0.943123;SGB=17.5943;VDB=0.612706;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN4113-S SNP G -> A AC=2;AN=182;BQB=0.575763;DP=2556;DP4=961,1450,22,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.60444e-18;MQSB=0.907692;RPB=0.998758;SGB=192.008;VDB=0.597492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN4241-S SNP G -> A AC=1;AN=170;BQB=0.715727;DP=2286;DP4=877,1323,4,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.91445e-07;MQSB=0.94261;RPB=0.646056;SGB=22.3266;VDB=0.0591386;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.11:15180057 chr11:015180057 0 W/15180057-15180057 FN666-S Single Base Substitution G-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN-310.SNP.11:15180869 chr11:015180869 0 W/15180869-15180869 FN-310 Single Base Substitution A-C INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1115-S.SNP.11:15181786 chr11:015181786 0 W/15181786-15181786 FN1115-S Single Base Substitution G-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1108-S.SNP.11:15184707 chr11:015184707 0 W/15184707-15184707 FN1108-S Single Base Substitution C-T INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN857-S.SNP.11:15185014 chr11:015185014 0 W/15185014-15185014 FN857-S Single Base Substitution G-A INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN2219-S.SNP.11:15186306 chr11:015186306 0 W/15186306-15186306 FN2219-S SNP A -> G AC=2;AN=190;BQB=0.663509;DP=3689;DP4=1229,1980,32,22;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.125779;MQB=0.0115296;MQSB=7.30673e-28;RPB=0.0551311;SGB=-479.935;VDB=0.999997;EFF=INTRON(MODIFIER||||308|LOC_Os11g26490|protein_coding|CODING|LOC_Os11g26490.1|1|1) FN1156-S.SNP.11:15189566 chr11:015189566 0 W/15189566-15189566 FN1156-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g26500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN821-S.SNP.11:15193859 chr11:015193859 0 W/15193859-15193859 FN821-S Single Base Substitution C-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. 701-4.SNP.11:15194330 chr11:015194330 0 W/15194330-15194330 701-4 Single Base Substitution G-C INTERGENIC Homo SNo: 1438, Mutant_ID: 701-4, Generation: M2, Mutations: 24, Genes: 47, Seed availability: Yes. FN2771-S.SNP.11:15198339 chr11:015198339 0 W/15198339-15198339 FN2771-S SNP G -> A AC=1;AN=198;BQB=0.969947;DP=4076;DP4=1867,2007,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.64346e-10;MQSB=0.959693;RPB=0.910708;SGB=67.9293;VDB=0.550465;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P525S|1206|LOC_Os11g26520|protein_coding|CODING|LOC_Os11g26520.1|6|1) FN-95.SNP.11:15206691 chr11:015206691 0 W/15206691-15206691 FN-95 Single Base Substitution T-C INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2295.SNP.11:15207889 chr11:015207889 0 W/15207889-15207889 FN2295 SNP G -> A AC=1;AN=192;BQB=0.989375;DP=5422;DP4=2448,2690,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0538547;MQB=0.186655;MQSB=0.0388627;RPB=0.872489;SGB=96.8096;VDB=0.943258;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.11:15208302 chr11:015208302 0 W/15208302-15208302 FN2359 SNP C -> T AC=1;AN=192;BQB=0.966999;DP=5979;DP4=2067,3052,11,435;HOB=5.42535e-05;ICB=0.000109072;MQ=33;MQ0F=0.0883091;MQB=0;MQSB=0;RPB=0.169703;SGB=-3982.18;VDB=3.23362e-17;EFF=INTRON(MODIFIER||||1214|LOC_Os11g26540|protein_coding|CODING|LOC_Os11g26540.1|1|1) FN2629-S.SNP.11:15211820 chr11:015211820 0 W/15211820-15211820 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.890401;DP=5181;DP4=2373,2521,17,14;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0187223;MQB=0.499869;MQSB=1.145e-13;RPB=0.358384;SGB=-5.24302;VDB=0.802808;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Tca|A672S|1214|LOC_Os11g26540|protein_coding|CODING|LOC_Os11g26540.1|4|1) FN1060-S.SNP.11:15214155 chr11:015214155 0 W/15214155-15214155 FN1060-S Single Base Substitution C-T INTERGENIC HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN2666-S.SNP.11:15215036 chr11:015215036 0 W/15215036-15215036 FN2666-S SNP C -> G AC=1;AN=200;BQB=0.707085;DP=4990;DP4=2137,2482,8,15;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000801603;MQB=3.50105e-09;MQSB=0.10702;RPB=0.743739;SGB=72.7161;VDB=0.489328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3942-S.SNP.11:15215422 chr11:015215422 0 W/15215422-15215422 FN3942-S SNP A -> T AC=1;AN=168;BQB=0.997963;DP=2871;DP4=1287,1422,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00766284;MQB=0.0126047;MQSB=0.0620568;RPB=0.110051;SGB=27.8864;VDB=0.158821;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.11:15218675 chr11:015218675 0 W/15218675-15218675 FN3852-S SNP C -> G AC=1;AN=158;BQB=0.801;DP=2151;DP4=989,1022,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.61848e-06;MQSB=0.646635;RPB=0.0734865;SGB=30.704;VDB=0.0891378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.11:15226283 chr11:015226283 0 W/15226283-15226283 FN2655-S SNP G -> T AC=1;AN=200;BQB=0.999777;DP=4791;DP4=2362,2140,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.65664e-13;MQSB=0.924159;RPB=0.998515;SGB=91.1059;VDB=0.672537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3364-S.SNP.11:15229491 chr11:015229491 0 W/15229491-15229491 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.65371;DP=3054;DP4=1634,1342,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.20485e-05;MQSB=0.999624;RPB=0.274246;SGB=28.7043;VDB=0.655343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E172K|209|LOC_Os11g26590|protein_coding|CODING|LOC_Os11g26590.1|2|1) FN2701-S.SNP.11:15230336 chr11:015230336 0 W/15230336-15230336 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.408925;DP=4969;DP4=2403,2298,24,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29757e-17;MQSB=0.980413;RPB=0.376112;SGB=97.9523;VDB=0.0365089;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.11:15231689 chr11:015231689 0 W/15231689-15231689 FN1372-S Single Base Substitution G-A INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN_N1-220-1.SNP.11:15232413 chr11:015232413 0 W/15232413-15232413 FN_N1-220-1 Single Base Substitution T-C HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN811-S.SNP.11:15233749 chr11:015233749 0 W/15233749-15233749 FN811-S Single Base Substitution A-G INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN491-S.SNP.11:15234153 chr11:015234153 0 W/15234153-15234153 FN491-S Single Base Substitution A-G INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN2440.SNP.11:15241299 chr11:015241299 0 W/15241299-15241299 FN2440 SNP A -> G AC=1;AN=200;BQB=0.944153;DP=5102;DP4=2418,2303,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196002;MQB=2.42249e-14;MQSB=0.77416;RPB=0.464732;SGB=50.3263;VDB=0.718947;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.11:15242534 chr11:015242534 0 W/15242534-15242534 FN2462 SNP C -> T AC=2;AN=200;BQB=0.830756;DP=5084;DP4=2226,2553,22,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.99797e-19;MQSB=0.0965494;RPB=0.995535;SGB=-1.612;VDB=0.0454033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3959-S.SNP.11:15243248 chr11:015243248 0 W/15243248-15243248 FN3959-S SNP C -> G AC=2;AN=168;BQB=0.874313;DP=2420;DP4=883,1423,9,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.20608e-11;MQSB=0.199588;RPB=0.912668;SGB=58.7637;VDB=0.800863;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.11:15245061 chr11:015245061 0 W/15245061-15245061 FN466-S Single Base Substitution G-C INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN-129.SNP.11:15247248 chr11:015247248 0 W/15247248-15247248 FN-129 Single Base Substitution G-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3363-S.SNP.11:15247248 chr11:015247248 0 W/15247248-15247248 FN3363-S SNP G -> T AC=2;AN=184;BQB=0.812896;DP=2275;DP4=1040,1076,5,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=5.79436e-08;MQSB=0.762304;RPB=0.946755;SGB=46.3132;VDB=0.705858;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.11:15247248 chr11:015247248 0 W/15247248-15247248 FN3940-S SNP G -> T AC=2;AN=158;BQB=0.910457;DP=1702;DP4=810,757,14,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.54316e-08;MQSB=0.915039;RPB=0.824825;SGB=77.6532;VDB=0.190907;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.11:15247248 chr11:015247248 0 W/15247248-15247248 FN417-S Single Base Substitution G-T INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN619-S.SNP.11:15247248 chr11:015247248 0 W/15247248-15247248 FN619-S Single Base Substitution G-T INTERGENIC HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN_N1-220-1.SNP.11:15261930 chr11:015261930 0 W/15261930-15261930 FN_N1-220-1 Single Base Substitution T-G HET SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN1446-S.SNP.11:15264208 chr11:015264208 0 W/15264208-15264208 FN1446-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g26650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN3493-S.SNP.11:15265546 chr11:015265546 0 W/15265546-15265546 FN3493-S SNP C -> G AC=1;AN=184;BQB=0.639674;DP=2736;DP4=1425,1196,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.57787e-05;MQSB=0.983663;RPB=0.15535;SGB=25.1826;VDB=0.332598;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S558C|1311|LOC_Os11g26650|protein_coding|CODING|LOC_Os11g26650.1|4|1) FN1481-S.SNP.11:15274259 chr11:015274259 0 W/15274259-15274259 FN1481-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g26670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. W252-6-1.SNP.11:15275729 chr11:015275729 0 W/15275729-15275729 W252-6-1 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g26670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN1287-S.SNP.11:15275959 chr11:015275959 0 W/15275959-15275959 FN1287-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g26670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3523-S.SNP.11:15276450 chr11:015276450 0 W/15276450-15276450 FN3523-S SNP C -> G AC=2;AN=188;BQB=0.957709;DP=3408;DP4=1784,1530,22,15;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00264085;MQB=2.4669e-12;MQSB=0.744055;RPB=0.434981;SGB=162.561;VDB=0.989071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Ctt|V870L|1567|LOC_Os11g26670|protein_coding|CODING|LOC_Os11g26670.1|4|1) FN3481-S.SNP.11:15277381 chr11:015277381 0 W/15277381-15277381 FN3481-S SNP G -> A AC=1;AN=184;BQB=0.957672;DP=3772;DP4=1558,2129,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00344645;MQB=6.89247e-08;MQSB=0.00250152;RPB=0.916328;SGB=62.3078;VDB=0.736613;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y559|1567|LOC_Os11g26670|protein_coding|CODING|LOC_Os11g26670.1|4|1) FN354-S.SNP.11:15285280 chr11:015285280 0 W/15285280-15285280 FN354-S Single Base Substitution C-A INTRON HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN3294-S.SNP.11:15287145 chr11:015287145 0 W/15287145-15287145 FN3294-S SNP C -> T AC=1;AN=184;BQB=0.570257;DP=2983;DP4=1642,1177,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.039e-06;MQSB=0.166905;RPB=0.996827;SGB=18.2315;VDB=0.773567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3294-S.SNP.11:15287148 chr11:015287148 0 W/15287148-15287148 FN3294-S SNP C -> G AC=1;AN=184;BQB=0.70931;DP=2979;DP4=1637,1231,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31594e-08;MQSB=0.918251;RPB=0.814143;SGB=23.2751;VDB=0.670706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.11:15298100 chr11:015298100 0 W/15298100-15298100 FN2721-S SNP T -> A AC=1;AN=200;BQB=0.948394;DP=4817;DP4=2519,2101,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.9885e-10;MQSB=0.869003;RPB=0.592119;SGB=61.9006;VDB=0.0498961;EFF=INTERGENIC(MODIFIER||||||||||1) FN-205.SNP.11:15305576 chr11:015305576 0 W/15305576-15305576 FN-205 Single Base Substitution A-T INTERGENIC HOMO SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN4314-S.SNP.11:15306146 chr11:015306146 0 W/15306146-15306146 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.576933;DP=2298;DP4=1044,1191,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.0948e-06;MQSB=0.963574;RPB=0.950962;SGB=34.878;VDB=0.800245;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.11:15306168 chr11:015306168 0 W/15306168-15306168 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.306248;DP=4815;DP4=2091,2389,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000207684;MQB=6.6986e-19;MQSB=0.998659;RPB=0.405484;SGB=28.752;VDB=0.623772;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.11:15308649 chr11:015308649 0 W/15308649-15308649 FN3369-S SNP T -> C AC=1;AN=184;BQB=0.925571;DP=2630;DP4=1270,1282,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62499e-13;MQSB=0.936491;RPB=0.0705081;SGB=63.9222;VDB=0.388118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.11:15313311 chr11:015313311 0 W/15313311-15313311 FN2608-S SNP G -> C AC=1;AN=198;BQB=0.918088;DP=4101;DP4=2025,1898,3,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.52834e-05;MQSB=0.985942;RPB=0.989078;SGB=26.5745;VDB=0.911144;EFF=INTERGENIC(MODIFIER||||||||||1) FN400-S.SNP.11:15316994 chr11:015316994 0 W/15316994-15316994 FN400-S Single Base Substitution T-C INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN762-S.SNP.11:15319591 chr11:015319591 0 W/15319591-15319591 FN762-S Single Base Substitution G-A INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2142-S.SNP.11:15323452 chr11:015323452 0 W/15323452-15323452 FN2142-S SNP T -> A AC=1;AN=168;BQB=0.284405;DP=3621;DP4=1819,1756,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000219258;MQSB=0.975431;RPB=0.808235;SGB=-36.0898;VDB=0.217394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1346-S.SNP.11:15325900 chr11:015325900 0 W/15325900-15325900 FN1346-S Single Base Substitution T-C INTERGENIC HET SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN672-S.SNP.11:15328066 chr11:015328066 0 W/15328066-15328066 FN672-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1499-S.SNP.11:15334701 chr11:015334701 0 W/15334701-15334701 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-290.SNP.11:15340981 chr11:015340981 0 W/15340981-15340981 FN-290 Single Base Substitution G-A INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1657-S.SNP.11:15342707 chr11:015342707 0 W/15342707-15342707 FN1657-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN2719-S.SNP.11:15342906 chr11:015342906 0 W/15342906-15342906 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.94814;DP=4622;DP4=2287,2059,16,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.32376e-11;MQSB=0.349852;RPB=0.987013;SGB=95.7111;VDB=0.766838;EFF=UTR_3_PRIME(MODIFIER||69||172|LOC_Os11g26790|protein_coding|CODING|LOC_Os11g26790.1|2|1) FN940-S.SNP.11:15344337 chr11:015344337 0 W/15344337-15344337 FN940-S Single Base Substitution A-G INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN-335.SNP.11:15345876 chr11:015345876 0 W/15345876-15345876 FN-335 Single Base Substitution A-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2656-S.SNP.11:15351998 chr11:015351998 0 W/15351998-15351998 FN2656-S SNP C -> T AC=2;AN=200;BQB=0.697459;DP=4185;DP4=1897,2056,32,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.51034e-35;MQSB=0.974926;RPB=0.344535;SGB=202.502;VDB=0.451579;EFF=INTERGENIC(MODIFIER||||||||||1) FN1042-S.SNP.11:15355429 chr11:015355429 0 W/15355429-15355429 FN1042-S Single Base Substitution C-T INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. W23-2-1.SNP.11:15360354 chr11:015360354 0 W/15360354-15360354 W23-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN-149.SNP.11:15361561 chr11:015361561 0 W/15361561-15361561 FN-149 Single Base Substitution C-G INTERGENIC HET SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2177-S.SNP.11:15364989 chr11:015364989 0 W/15364989-15364989 FN2177-S SNP G -> A AC=2;AN=168;BQB=0.0928002;DP=3025;DP4=1695,1274,22,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.66884e-18;MQSB=0.891237;RPB=0.874811;SGB=-237.157;VDB=0.205963;EFF=INTERGENIC(MODIFIER||||||||||1) FN-128.SNP.11:15365814 chr11:015365814 0 W/15365814-15365814 FN-128 Single Base Substitution A-T INTERGENIC HET SNo: 128, Mutant_ID: FN-128, Generation: M2, Mutations: 39, Genes: 116, Seed availability: Yes. FN964-S.SNP.11:15367130 chr11:015367130 0 W/15367130-15367130 FN964-S Single Base Substitution G-A INTERGENIC HOMO SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN-117.SNP.11:15371721 chr11:015371721 0 W/15371721-15371721 FN-117 Single Base Substitution C-T INTERGENIC HET SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN2304.SNP.11:15376384 chr11:015376384 0 W/15376384-15376384 FN2304 SNP C -> G AC=1;AN=192;BQB=0.934189;DP=5208;DP4=2494,2402,22,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28895e-21;MQSB=0.836203;RPB=0.18089;SGB=52.7209;VDB=0.537257;EFF=INTERGENIC(MODIFIER||||||||||1) FN3491-S.SNP.11:15383128 chr11:015383128 0 W/15383128-15383128 FN3491-S SNP G -> T AC=1;AN=188;BQB=0.945439;DP=2809;DP4=1338,1425,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.85761e-05;MQSB=0.907485;RPB=0.751851;SGB=21.8113;VDB=0.493954;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.11:15384128 chr11:015384128 0 W/15384128-15384128 FN3845-S SNP G -> A AC=1;AN=190;BQB=0.378562;DP=2836;DP4=1428,1321,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.73101e-06;MQSB=0.999785;RPB=0.826861;SGB=28.9929;VDB=0.0283691;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.11:15387837 chr11:015387837 0 W/15387837-15387837 FN3504-S SNP G -> A AC=2;AN=188;BQB=0.982163;DP=2607;DP4=1122,1358,6,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.77517e-10;MQSB=0.989193;RPB=0.436396;SGB=36.2493;VDB=0.177731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2286.SNP.11:15390086 chr11:015390086 0 W/15390086-15390086 FN2286 SNP C -> T AC=2;AN=192;BQB=0.637729;DP=5009;DP4=2291,2279,22,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.78123e-20;MQSB=0.79275;RPB=0.85972;SGB=-90.3426;VDB=0.831522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.11:15399862 chr11:015399862 0 W/15399862-15399862 FN3909-S SNP T -> C AC=2;AN=158;BQB=0.94574;DP=2492;DP4=1251,1106,14,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.93147e-16;MQSB=0.993077;RPB=0.504505;SGB=125.717;VDB=0.251422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.11:15403936 chr11:015403936 0 W/15403936-15403936 FN3050-S SNP A -> G AC=2;AN=184;BQB=0.909995;DP=3098;DP4=1207,1738,13,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.46562e-18;MQSB=0.995424;RPB=0.363369;SGB=130.135;VDB=0.633654;EFF=INTERGENIC(MODIFIER||||||||||1) FN1330-S.SNP.11:15410638 chr11:015410638 0 W/15410638-15410638 FN1330-S Single Base Substitution A-G INTERGENIC HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1265-S.SNP.11:15410703 chr11:015410703 0 W/15410703-15410703 FN1265-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN742-S.SNP.11:15413831 chr11:015413831 0 W/15413831-15413831 FN742-S Single Base Substitution G-T INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN2235-S.SNP.11:15414562 chr11:015414562 0 W/15414562-15414562 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.968806;DP=3280;DP4=1289,1687,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00425463;MQSB=1.27848e-17;RPB=0.833308;SGB=14.7784;VDB=0.217488;EFF=INTERGENIC(MODIFIER||||||||||1) FN3673-S.SNP.11:15422360 chr11:015422360 0 W/15422360-15422360 FN3673-S SNP A -> T AC=1;AN=190;BQB=0.900429;DP=2920;DP4=1452,1323,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02671e-11;MQSB=0.909707;RPB=0.910799;SGB=36.4291;VDB=0.51241;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F139Y|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F139Y|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN1573-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN1573-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g26850 erythronate-4-phosphate dehydrogenase, putative, expressed SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3283-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN3283-S SNP T -> G AC=1;AN=184;BQB=0.558776;DP=3611;DP4=1595,1763,17,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.31987e-13;MQSB=0.480384;RPB=0.426949;SGB=-167.078;VDB=0.209512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN3538-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN3538-S SNP T -> G AC=1;AN=188;BQB=0.0829838;DP=3629;DP4=1596,1759,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56807e-08;MQSB=0.129004;RPB=0.996655;SGB=-114.435;VDB=0.350956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN3890-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN3890-S SNP T -> G AC=1;AN=158;BQB=0.844856;DP=2661;DP4=1181,1246,10,15;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.63476e-14;MQSB=0.923991;RPB=0.928607;SGB=-42.9456;VDB=0.52933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN4087-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN4087-S SNP T -> G AC=1;AN=182;BQB=0.915067;DP=3469;DP4=1564,1693,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.31912e-07;MQSB=0.874637;RPB=0.763065;SGB=15.6115;VDB=0.542119;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN4160-S.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN4160-S SNP T -> G AC=1;AN=170;BQB=0.15404;DP=2790;DP4=1275,1303,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.26087e-10;MQSB=0.970537;RPB=0.753022;SGB=-38.7704;VDB=0.930276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|450|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.2|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q31P|392|LOC_Os11g26850|protein_coding|CODING|LOC_Os11g26850.3|1|1) FN_N1-130-1.SNP.11:15422684 chr11:015422684 0 W/15422684-15422684 FN_N1-130-1 Single Base Substitution T-G HET LOC_Os11g26850 erythronate-4-phosphate dehydrogenase, putative, expressed SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN-356.SNP.11:15424919 chr11:015424919 0 W/15424919-15424919 FN-356 Single Base Substitution C-T INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN666-S.SNP.11:15427029 chr11:015427029 0 W/15427029-15427029 FN666-S Single Base Substitution C-T INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN2629-S.SNP.11:15428551 chr11:015428551 0 W/15428551-15428551 FN2629-S SNP A -> G AC=1;AN=200;BQB=0.873699;DP=5053;DP4=2768,2026,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.29242e-16;MQSB=0.737269;RPB=0.0197109;SGB=50.3263;VDB=0.465273;EFF=INTERGENIC(MODIFIER||||||||||1) FN482-S.SNP.11:15434494 chr11:015434494 0 W/15434494-15434494 FN482-S Single Base Substitution T-C INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN1600-S.SNP.11:15445986 chr11:015445986 0 W/15445986-15445986 FN1600-S Single Base Substitution C-A INTERGENIC Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN3302-S.SNP.11:15450221 chr11:015450221 0 W/15450221-15450221 FN3302-S SNP G -> A AC=1;AN=184;BQB=0.408861;DP=3053;DP4=1269,1704,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.92463e-06;MQSB=0.973579;RPB=0.481401;SGB=62.3078;VDB=0.829097;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.11:15456460 chr11:015456460 0 W/15456460-15456460 FN4132-S SNP A -> G AC=1;AN=182;BQB=0.979316;DP=2609;DP4=1392,1168,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.36901e-09;MQSB=0.997783;RPB=0.850447;SGB=57.644;VDB=0.757462;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.11:15458560 chr11:015458560 0 W/15458560-15458560 FN2224-S SNP T -> C AC=1;AN=190;BQB=0.633843;DP=4989;DP4=2592,2119,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.65817e-11;MQSB=0.999301;RPB=0.822039;SGB=46.6446;VDB=0.83266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.11:15475615 chr11:015475615 0 W/15475615-15475615 FN3859-S SNP G -> T AC=1;AN=158;BQB=0.499811;DP=2543;DP4=1125,1302,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000122004;MQSB=0.990169;RPB=0.819066;SGB=30.704;VDB=0.952086;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cAg|P171Q|501|LOC_Os11g26920|protein_coding|CODING|LOC_Os11g26920.1|2|1) FN2297.SNP.11:15481445 chr11:015481445 0 W/15481445-15481445 FN2297 SNP A -> G AC=1;AN=192;BQB=0.63033;DP=4447;DP4=1972,2077,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000674612;MQB=1.63887e-06;MQSB=0.73896;RPB=0.716263;SGB=21.2209;VDB=0.00551972;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.11:15481723 chr11:015481723 0 W/15481723-15481723 FN343-S Single Base Substitution C-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2780-S.SNP.11:15482665 chr11:015482665 0 W/15482665-15482665 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.975216;DP=4335;DP4=2108,1933,8,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.91149e-11;MQSB=0.995767;RPB=0.720485;SGB=34.5346;VDB=0.55842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2307.SNP.11:15482686 chr11:015482686 0 W/15482686-15482686 FN2307 SNP C -> T AC=1;AN=192;BQB=0.518349;DP=5030;DP4=2390,2373,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.90108e-06;MQSB=0.68695;RPB=0.0551051;SGB=4.22611;VDB=0.434549;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.11:15483083 chr11:015483083 0 W/15483083-15483083 FN4188-S SNP A -> G AC=1;AN=170;BQB=0.861515;DP=2525;DP4=1306,1122,10,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.49333e-10;MQSB=0.991955;RPB=0.443849;SGB=65.8619;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.11:15483634 chr11:015483634 0 W/15483634-15483634 FN1754-S SNP T -> C AC=1;AN=188;BQB=0.343867;DP=2418;DP4=1091,1299,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.119885;MQSB=0.413569;RPB=0.691545;SGB=-13.9132;VDB=0.239262;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.11:15485951 chr11:015485951 0 W/15485951-15485951 FN4272-S SNP C -> G AC=1;AN=170;BQB=0.905172;DP=2507;DP4=1090,1280,13,16;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.69871e-16;MQSB=0.956817;RPB=0.995478;SGB=89.9604;VDB=0.268819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A62G|91|LOC_Os11g26930|protein_coding|CODING|LOC_Os11g26930.1|1|1) FN2263-S.SNP.11:15489268 chr11:015489268 0 W/15489268-15489268 FN2263-S SNP T -> G AC=2;AN=190;BQB=0.135028;DP=4900;DP4=2597,2041,25,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.48902e-26;MQSB=0.862092;RPB=0.841394;SGB=149.825;VDB=0.0459173;EFF=INTERGENIC(MODIFIER||||||||||1) FN584-S.SNP.11:15492381 chr11:015492381 0 W/15492381-15492381 FN584-S Single Base Substitution G-A INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2333.SNP.11:15494552 chr11:015494552 0 W/15494552-15494552 FN2333 SNP G -> A AC=1;AN=192;BQB=0.999074;DP=4749;DP4=2310,2180,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.07882e-08;MQSB=0.98308;RPB=0.962053;SGB=7.3548;VDB=0.680278;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.11:15494553 chr11:015494553 0 W/15494553-15494553 FN2333 SNP T -> A AC=1;AN=192;BQB=0.592858;DP=4766;DP4=2305,2191,4,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.44845e-09;MQSB=0.999962;RPB=0.820959;SGB=58.3392;VDB=0.729579;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.11:15495895 chr11:015495895 0 W/15495895-15495895 FN775-S Single Base Substitution C-T INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3657-S.SNP.11:15496401 chr11:015496401 0 W/15496401-15496401 FN3657-S SNP A -> G AC=2;AN=190;BQB=0.885788;DP=3128;DP4=1247,1756,12,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.61526e-16;MQSB=0.966004;RPB=0.207704;SGB=96.5165;VDB=0.365731;EFF=INTERGENIC(MODIFIER||||||||||1) FN-227.SNP.11:15499908 chr11:015499908 0 W/15499908-15499908 FN-227 Single Base Substitution A-G INTERGENIC HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN3444-S.SNP.11:15501745 chr11:015501745 0 W/15501745-15501745 FN3444-S SNP G -> A AC=1;AN=184;BQB=0.960806;DP=2631;DP4=1196,1370,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82297e-05;MQSB=0.943457;RPB=0.529716;SGB=30.6558;VDB=0.659709;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.11:15506832 chr11:015506832 0 W/15506832-15506832 FN4049-S SNP T -> A AC=1;AN=168;BQB=0.75946;DP=2816;DP4=950,1384,2,11;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.1618e-08;MQSB=0.00298283;RPB=0.616009;SGB=-17.5266;VDB=0.169243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.11:15512548 chr11:015512548 0 W/15512548-15512548 FN3564-S SNP G -> C AC=1;AN=188;BQB=0.966674;DP=2589;DP4=1368,1147,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.42981e-09;MQSB=0.999971;RPB=0.987215;SGB=76.2387;VDB=0.741453;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.11:15515281 chr11:015515281 0 W/15515281-15515281 W7-1-1 Single Base Substitution A-C INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN819-S.SNP.11:15527348 chr11:015527348 0 W/15527348-15527348 FN819-S Single Base Substitution C-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2459.SNP.11:15527459 chr11:015527459 0 W/15527459-15527459 FN2459 SNP A -> T AC=1;AN=200;BQB=0.369121;DP=4514;DP4=2309,1904,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35145e-11;MQSB=0.932384;RPB=0.534337;SGB=37.3004;VDB=0.231395;EFF=INTERGENIC(MODIFIER||||||||||1) FN-289.SNP.11:15533177 chr11:015533177 0 W/15533177-15533177 FN-289 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g26990 expressed protein SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN685-S.SNP.11:15534128 chr11:015534128 0 W/15534128-15534128 FN685-S Single Base Substitution T-A INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN4032-S.SNP.11:15535295 chr11:015535295 0 W/15535295-15535295 FN4032-S SNP A -> T AC=2;AN=168;BQB=0.729406;DP=2593;DP4=1163,1212,20,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.02173e-18;MQSB=0.037021;RPB=0.651035;SGB=140.789;VDB=0.0669537;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.11:15535296 chr11:015535296 0 W/15535296-15535296 FN4032-S SNP G -> T AC=2;AN=168;BQB=0.98914;DP=2597;DP4=1225,1222,20,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.7447e-17;MQSB=0.0399978;RPB=0.44179;SGB=96.5026;VDB=0.115524;EFF=INTERGENIC(MODIFIER||||||||||1) FN1326-S.SNP.11:15535648 chr11:015535648 0 W/15535648-15535648 FN1326-S Single Base Substitution G-A INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2113-S.SNP.11:15539411 chr11:015539411 0 W/15539411-15539411 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.02893;DP=4202;DP4=2192,1966,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.50653e-09;MQSB=0.960233;RPB=0.46414;SGB=-147.902;VDB=0.997334;EFF=INTERGENIC(MODIFIER||||||||||1) FN2293.SNP.11:15541738 chr11:015541738 0 W/15541738-15541738 FN2293 SNP G -> A AC=2;AN=192;BQB=0.274376;DP=5552;DP4=2953,2054,32,8;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.71181e-16;MQSB=0.861204;RPB=0.917749;SGB=-1.22432;VDB=0.50409;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.11:15542702 chr11:015542702 0 W/15542702-15542702 FN-247 Single Base Substitution A-G INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-94.SNP.11:15542868 chr11:015542868 0 W/15542868-15542868 FN-94 Single Base Substitution G-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-94.SNP.11:15542869 chr11:015542869 0 W/15542869-15542869 FN-94 Single Base Substitution A-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1326-S.SNP.11:15551173 chr11:015551173 0 W/15551173-15551173 FN1326-S Single Base Substitution G-A INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN3592-S.SNP.11:15554806 chr11:015554806 0 W/15554806-15554806 FN3592-S SNP G -> A AC=1;AN=188;BQB=0.849147;DP=2711;DP4=1163,1429,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31578e-07;MQSB=0.00018268;RPB=0.712463;SGB=53.5223;VDB=0.0198684;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.11:15555004 chr11:015555004 0 W/15555004-15555004 FN_N1-130-1 Single Base Substitution G-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1481-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN1481-S Single Base Substitution G-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1573-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN1573-S Single Base Substitution G-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN3283-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN3283-S SNP G -> T AC=1;AN=184;BQB=0.938352;DP=3406;DP4=1840,1429,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.33513e-07;MQSB=0.233059;RPB=0.907144;SGB=3.75875;VDB=0.228076;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN3538-S SNP G -> T AC=1;AN=188;BQB=0.945619;DP=3211;DP4=1789,1325,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.59212e-08;MQSB=0.376426;RPB=0.402851;SGB=20.9896;VDB=0.62439;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN3890-S SNP G -> T AC=1;AN=158;BQB=0.986542;DP=2824;DP4=1519,1178,17,12;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.38785e-14;MQSB=0.119966;RPB=0.922578;SGB=87.9846;VDB=0.945744;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN4160-S SNP G -> T AC=1;AN=170;BQB=0.948358;DP=2631;DP4=1512,1018,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.39123e-07;MQSB=0.337925;RPB=0.730765;SGB=14.9986;VDB=0.343518;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.11:15567450 chr11:015567450 0 W/15567450-15567450 FN_N1-130-1 Single Base Substitution G-T HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN3499-S.SNP.11:15573338 chr11:015573338 0 W/15573338-15573338 FN3499-S SNP A -> G AC=1;AN=188;BQB=0.90664;DP=2897;DP4=1220,1498,91,21;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0231274;MQB=0;MQSB=0.0321387;RPB=0.96679;SGB=-1095.23;VDB=0.999999;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K787E|1469|LOC_Os11g27050|protein_coding|CODING|LOC_Os11g27050.1|1|1) FN3722-S.SNP.11:15574253 chr11:015574253 0 W/15574253-15574253 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.918547;DP=2915;DP4=1247,1582,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0915952;MQB=0.8476;MQSB=2.53035e-08;RPB=0.964893;SGB=43.2083;VDB=0.67759;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D1054N|1469|LOC_Os11g27050|protein_coding|CODING|LOC_Os11g27050.1|2|1) FN-335.SNP.11:15577217 chr11:015577217 0 W/15577217-15577217 FN-335 Single Base Substitution C-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN574-S.SNP.11:15577700 chr11:015577700 0 W/15577700-15577700 FN574-S Single Base Substitution C-A INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN2582-S.SNP.11:15578848 chr11:015578848 0 W/15578848-15578848 FN2582-S SNP G -> C AC=1;AN=198;BQB=0.210204;DP=5392;DP4=2306,2811,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0830861;MQB=0.644631;MQSB=4.78399e-37;RPB=0.163867;SGB=63.3342;VDB=0.714324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.11:15585381 chr11:015585381 0 W/15585381-15585381 FN2475 SNP G -> A AC=1;AN=200;BQB=0.403032;DP=4177;DP4=1673,1957,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91779e-05;MQSB=0.0295038;RPB=0.777268;SGB=16.4591;VDB=0.950037;EFF=INTRON(MODIFIER||||307|LOC_Os11g27070|protein_coding|CODING|LOC_Os11g27070.1|1|1) FN3472-S.SNP.11:15587114 chr11:015587114 0 W/15587114-15587114 FN3472-S SNP A -> T AC=2;AN=184;BQB=0.943408;DP=3435;DP4=1586,1720,27,22;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=2.89106e-22;MQSB=0.825272;RPB=0.657935;SGB=162.532;VDB=0.0497519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E178V|213|LOC_Os11g27080|protein_coding|CODING|LOC_Os11g27080.1|2|1) FN1738-S.SNP.11:15594534 chr11:015594534 0 W/15594534-15594534 FN1738-S SNP C -> G AC=1;AN=188;BQB=0.142035;DP=7929;DP4=4688,3161,19,21;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.0562492;MQB=0.697154;MQSB=0;RPB=0.709168;SGB=-402.802;VDB=0.468944;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S55C|585|LOC_Os11g27100|protein_coding|CODING|LOC_Os11g27100.1|1|1) FN3293-S.SNP.11:15598252 chr11:015598252 0 W/15598252-15598252 FN3293-S SNP C -> A AC=1;AN=184;BQB=0.295911;DP=3065;DP4=1772,1158,14,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.6615e-10;MQSB=0.95494;RPB=0.2411;SGB=45.9712;VDB=0.761566;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.11:15598277 chr11:015598277 0 W/15598277-15598277 FN4046-S SNP G -> A AC=2;AN=168;BQB=4.53891e-08;DP=2761;DP4=1517,1100,14,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.06149e-12;MQSB=0.999988;RPB=0.892547;SGB=-12.3568;VDB=0.163824;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.11:15600559 chr11:015600559 0 W/15600559-15600559 FN962-S Single Base Substitution C-G INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1196-S.SNP.11:15608646 chr11:015608646 0 W/15608646-15608646 FN1196-S Single Base Substitution G-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1196-S.SNP.11:15608647 chr11:015608647 0 W/15608647-15608647 FN1196-S Single Base Substitution T-A INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1423-S.SNP.11:15618770 chr11:015618770 0 W/15618770-15618770 FN1423-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN892-S.SNP.11:15629296 chr11:015629296 0 W/15629296-15629296 FN892-S Single Base Substitution C-G INTERGENIC HET SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2689-S.SNP.11:15631616 chr11:015631616 0 W/15631616-15631616 FN2689-S SNP G -> C AC=1;AN=200;BQB=0.93837;DP=5067;DP4=2446,2331,17,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.14935e-18;MQSB=0.989076;RPB=0.914353;SGB=105.163;VDB=0.750394;EFF=INTERGENIC(MODIFIER||||||||||1) FN-71.SNP.11:15641551 chr11:015641551 0 W/15641551-15641551 FN-71 Single Base Substitution C-A INTRON HOMO SNo: 71, Mutant_ID: FN-71, Generation: M2, Mutations: 109, Genes: 9, Seed availability: Yes. FN1441-S.SNP.11:15641974 chr11:015641974 0 W/15641974-15641974 FN1441-S Single Base Substitution T-A INTRON HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN499-S.SNP.11:15644654 chr11:015644654 0 W/15644654-15644654 FN499-S Single Base Substitution G-A INTRON HOMO SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3934-S.SNP.11:15647289 chr11:015647289 0 W/15647289-15647289 FN3934-S SNP C -> T AC=2;AN=158;BQB=0.982206;DP=3055;DP4=1523,1427,17,13;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.00556465;MQB=5.17607e-14;MQSB=0.131937;RPB=0.300385;SGB=125.717;VDB=0.342935;EFF=INTRON(MODIFIER||||474|LOC_Os11g27170|protein_coding|CODING|LOC_Os11g27170.1|3|1) FN1722-S.SNP.11:15648531 chr11:015648531 0 W/15648531-15648531 FN1722-S SNP G -> A AC=1;AN=188;BQB=0.0788139;DP=2310;DP4=996,1248,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.0017316;MQB=9.76466e-05;MQSB=0.575804;RPB=0.996397;SGB=-14.9998;VDB=0.747261;EFF=INTRON(MODIFIER||||474|LOC_Os11g27170|protein_coding|CODING|LOC_Os11g27170.1|3|1) FN4112-S.SNP.11:15649655 chr11:015649655 0 W/15649655-15649655 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.974469;DP=2994;DP4=1495,1429,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.91334e-07;MQSB=0.990225;RPB=0.993814;SGB=28.6061;VDB=0.764391;EFF=INTRON(MODIFIER||||474|LOC_Os11g27170|protein_coding|CODING|LOC_Os11g27170.1|3|1) FN2701-S.SNP.11:15653368 chr11:015653368 0 W/15653368-15653368 FN2701-S SNP A -> G AC=1;AN=200;BQB=0.853062;DP=4834;DP4=2330,2180,15,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58483e-08;MQSB=0.25778;RPB=0.959011;SGB=58.2954;VDB=0.801126;EFF=INTRON(MODIFIER||||474|LOC_Os11g27170|protein_coding|CODING|LOC_Os11g27170.1|3|1) FN633-S.SNP.11:15663712 chr11:015663712 0 W/15663712-15663712 FN633-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g27210 retrotransposon protein, putative, unclassified, expressed SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN439-S.SNP.11:15677423 chr11:015677423 0 W/15677423-15677423 FN439-S Single Base Substitution T-A INTRON HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN2729-S.SNP.11:15677527 chr11:015677527 0 W/15677527-15677527 FN2729-S SNP T -> A AC=2;AN=200;BQB=0.872;DP=4856;DP4=2229,2409,26,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.85182e-20;MQSB=0.916612;RPB=0.976792;SGB=102.43;VDB=0.965633;EFF=INTRON(MODIFIER||||488|LOC_Os11g27250|protein_coding|CODING|LOC_Os11g27250.1|4|1) FN1641-S.SNP.11:15678781 chr11:015678781 0 W/15678781-15678781 FN1641-S Single Base Substitution G-A INTRON Homo SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3513-S.SNP.11:15679261 chr11:015679261 0 W/15679261-15679261 FN3513-S SNP C -> A AC=1;AN=188;BQB=0.994796;DP=2665;DP4=1315,1283,3,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.12405e-05;MQSB=0.894271;RPB=0.835997;SGB=26.2637;VDB=0.895085;EFF=INTRON(MODIFIER||||488|LOC_Os11g27250|protein_coding|CODING|LOC_Os11g27250.1|7|1) FN910-S.SNP.11:15681189 chr11:015681189 0 W/15681189-15681189 FN910-S Single Base Substitution C-G INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN3302-S.SNP.11:15685346 chr11:015685346 0 W/15685346-15685346 FN3302-S SNP A -> G AC=1;AN=184;BQB=0.986509;DP=2901;DP4=1447,1340,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.41057e-08;MQSB=0.92013;RPB=0.999819;SGB=57.786;VDB=0.389015;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N142D|483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N142D|483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.2|4|1) FN1270-S.SNP.11:15685641 chr11:015685641 0 W/15685641-15685641 FN1270-S Single Base Substitution C-T INTRON HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN2265-S.SNP.11:15689402 chr11:015689402 0 W/15689402-15689402 FN2265-S SNP A -> C AC=1;AN=190;BQB=0.907831;DP=5101;DP4=2340,2340,19,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.30162e-22;MQSB=0.847596;RPB=0.362832;SGB=-47.0314;VDB=0.0796408;EFF=INTRON(MODIFIER||||483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.1|5|1),INTRON(MODIFIER||||483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.2|4|1) FN1264-S.SNP.11:15690487 chr11:015690487 0 W/15690487-15690487 FN1264-S Single Base Substitution A-C INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3877-S.SNP.11:15692301 chr11:015692301 0 W/15692301-15692301 FN3877-S SNP A -> G AC=1;AN=158;BQB=0.132754;DP=2557;DP4=1352,1079,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.92329e-08;MQSB=0.97925;RPB=0.396653;SGB=54.2901;VDB=0.444117;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R292G|483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R292G|483|LOC_Os11g27264|protein_coding|CODING|LOC_Os11g27264.2|9|1) FN577-S.SNP.11:15699376 chr11:015699376 0 W/15699376-15699376 FN577-S Single Base Substitution T-A INTERGENIC HOMO SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN886-S.SNP.11:15706879 chr11:015706879 0 W/15706879-15706879 FN886-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN-40.SNP.11:15707972 chr11:015707972 0 W/15707972-15707972 FN-40 Single Base Substitution A-C INTRON Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN1030-S.SNP.11:15707972 chr11:015707972 0 W/15707972-15707972 FN1030-S Single Base Substitution A-C INTRON HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. W721-2-1.SNP.11:15707972 chr11:015707972 0 W/15707972-15707972 W721-2-1 Single Base Substitution A-C INTRON HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2711-S.SNP.11:15709691 chr11:015709691 0 W/15709691-15709691 FN2711-S SNP T -> G AC=2;AN=200;BQB=0.00426529;DP=4890;DP4=2099,2552,15,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.58472e-20;MQSB=0.289154;RPB=0.248981;SGB=86.7987;VDB=0.72421;EFF=INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.1|1|1),INTRON(MODIFIER||||189|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.2|1|1),INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.4|1|1),INTRON(MODIFIER||||225|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.5|1|1),INTRON(MODIFIER||||151|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.6|1|1) FN3923-S.SNP.11:15711419 chr11:015711419 0 W/15711419-15711419 FN3923-S SNP G -> T AC=1;AN=158;BQB=0.998354;DP=2092;DP4=1090,937,3,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.47876e-05;MQSB=0.969778;RPB=0.900936;SGB=23.9652;VDB=0.180595;EFF=INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.1|1|1),INTRON(MODIFIER||||189|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.2|1|1),INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.4|1|1),INTRON(MODIFIER||||225|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.5|1|1),INTRON(MODIFIER||||151|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.6|1|1) FN3902-S.SNP.11:15730248 chr11:015730248 0 W/15730248-15730248 FN3902-S SNP C -> T AC=1;AN=158;BQB=0.998196;DP=2564;DP4=1196,1291,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0276911;MQB=0.00959208;MQSB=0.0041458;RPB=0.397406;SGB=34.0735;VDB=0.712673;EFF=INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.1|7|1),INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.4|7|1),INTRON(MODIFIER||||225|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.5|5|1) FN1697-S.SNP.11:15732030 chr11:015732030 0 W/15732030-15732030 FN1697-S SNP G -> C AC=1;AN=188;BQB=0.901441;DP=2451;DP4=870,1538,3,12;HOB=5.65867e-05;ICB=0.000113775;MQ=35;MQ0F=0.0326397;MQB=0.178317;MQSB=5.61239e-36;RPB=0.647817;SGB=23.5329;VDB=0.0870689;EFF=INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.1|7|1),INTRON(MODIFIER||||358|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.4|7|1),INTRON(MODIFIER||||225|LOC_Os11g27329|protein_coding|CODING|LOC_Os11g27329.5|5|1) FN-68.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN-68 Single Base Substitution G-A INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1006-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN1006-S Single Base Substitution G-A INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN2395.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN2395 SNP G -> A AC=2;AN=200;BQB=0.734224;DP=4437;DP4=2257,1917,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.76041e-26;MQSB=0.998709;RPB=0.980518;SGB=159.24;VDB=0.484217;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN2579-S SNP G -> A AC=2;AN=198;BQB=0.544377;DP=4034;DP4=1995,1780,32,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.5583e-25;MQSB=0.971989;RPB=0.168781;SGB=228.759;VDB=0.552884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2705-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN2705-S SNP G -> A AC=2;AN=200;BQB=0.904145;DP=4586;DP4=2281,2084,15,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.45372e-19;MQSB=0.909193;RPB=0.36011;SGB=105.163;VDB=0.829892;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN3297-S SNP G -> A AC=2;AN=184;BQB=0.998437;DP=2865;DP4=1569,1197,22,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00034904;MQB=8.57296e-18;MQSB=0.938051;RPB=0.496736;SGB=130.135;VDB=0.725119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN3919-S SNP G -> A AC=2;AN=158;BQB=0.617126;DP=2317;DP4=1255,961,27,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.12318e-18;MQSB=0.89528;RPB=0.801704;SGB=128.418;VDB=0.179334;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN487-S Single Base Substitution G-A INTERGENIC HOMO SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN_827-1.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 FN_827-1 Single Base Substitution G-A Homo SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. W443-5-1-3.SNP.11:15739419 chr11:015739419 0 W/15739419-15739419 W443-5-1-3 Single Base Substitution G-A INTERGENIC HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN-338.SNP.11:15742141 chr11:015742141 0 W/15742141-15742141 FN-338 Single Base Substitution C-A INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN2433.SNP.11:15744908 chr11:015744908 0 W/15744908-15744908 FN2433 SNP C -> A AC=1;AN=200;BQB=0.953443;DP=6232;DP4=2509,2775,9,6;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0012837;MQB=0.00657596;MQSB=0;RPB=0.934112;SGB=4.67442;VDB=0.169693;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.11:15750632 chr11:015750632 0 W/15750632-15750632 FN2395 SNP T -> G AC=2;AN=200;BQB=0.242975;DP=4237;DP4=1852,2002,25,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000236016;MQB=8.97548e-32;MQSB=0.965583;RPB=0.557368;SGB=192.323;VDB=0.952083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.11:15751770 chr11:015751770 0 W/15751770-15751770 FN1429-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3753-S.SNP.11:15751770 chr11:015751770 0 W/15751770-15751770 FN3753-S SNP A -> G AC=2;AN=190;BQB=0.793478;DP=2839;DP4=1145,1515,11,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.1739e-18;MQSB=0.999909;RPB=0.37175;SGB=59.414;VDB=0.18608;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.11:15751770 chr11:015751770 0 W/15751770-15751770 FN4139-S SNP A -> G AC=2;AN=170;BQB=0.743404;DP=2590;DP4=1049,1376,19,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.20818e-18;MQSB=0.992621;RPB=0.996938;SGB=107.174;VDB=0.0800131;EFF=INTERGENIC(MODIFIER||||||||||1) FN4022-S.SNP.11:15755604 chr11:015755604 0 W/15755604-15755604 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.999808;DP=2376;DP4=1321,949,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.68032e-07;MQSB=0.982326;RPB=0.906941;SGB=34.748;VDB=0.754116;EFF=INTERGENIC(MODIFIER||||||||||1) FN2619-S.SNP.11:15757305 chr11:015757305 0 W/15757305-15757305 FN2619-S SNP G -> T AC=1;AN=198;BQB=0.721245;DP=4080;DP4=1910,1994,18,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00147059;MQB=2.13268e-16;MQSB=0.463937;RPB=0.9248;SGB=132.261;VDB=0.439923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.11:15757482 chr11:015757482 0 W/15757482-15757482 FN3757-S SNP G -> A AC=1;AN=190;BQB=0.8855;DP=2990;DP4=1353,1555,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.08737e-08;MQSB=0.994882;RPB=0.604718;SGB=39.6545;VDB=0.643015;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.11:15759730 chr11:015759730 0 W/15759730-15759730 FN3926-S SNP G -> A AC=1;AN=158;BQB=0.540696;DP=2748;DP4=1288,1163,18,23;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.54177e-24;MQSB=0.965564;RPB=0.622939;SGB=37.6918;VDB=0.187482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3926-S.SNP.11:15759731 chr11:015759731 0 W/15759731-15759731 FN3926-S SNP G -> A AC=1;AN=158;BQB=0.878306;DP=2743;DP4=1307,1108,19,24;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.38969e-26;MQSB=0.971206;RPB=0.734481;SGB=-6.93241;VDB=0.106233;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.11:15760135 chr11:015760135 0 W/15760135-15760135 FN762-S Single Base Substitution T-G INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1266-S.SNP.11:15764663 chr11:015764663 0 W/15764663-15764663 FN1266-S Single Base Substitution T-G INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN918-S.SNP.11:15766526 chr11:015766526 0 W/15766526-15766526 FN918-S Single Base Substitution G-A INTERGENIC HET SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN-86.SNP.11:15767452 chr11:015767452 0 W/15767452-15767452 FN-86 Single Base Substitution T-C INTERGENIC HET SNo: 86, Mutant_ID: FN-86, Generation: M2, Mutations: 33, Genes: 15, Seed availability: Yes. FN3452-S.SNP.11:15769852 chr11:015769852 0 W/15769852-15769852 FN3452-S SNP G -> T AC=2;AN=184;BQB=0.932976;DP=1978;DP4=267,1667,1,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.9622e-06;MQSB=0.00158359;RPB=0.254633;SGB=35.1773;VDB=0.682146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.11:15769853 chr11:015769853 0 W/15769853-15769853 FN3452-S SNP G -> T AC=2;AN=184;BQB=0.950912;DP=1976;DP4=259,1682,1,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.5645e-05;MQSB=0.00183874;RPB=0.396559;SGB=30.6558;VDB=0.751795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.11:15786506 chr11:015786506 0 W/15786506-15786506 FN2780-S SNP T -> C AC=1;AN=198;BQB=0.889978;DP=4440;DP4=2219,2028,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.5397e-10;MQSB=0.932002;RPB=0.999938;SGB=47.3393;VDB=0.0987412;EFF=INTERGENIC(MODIFIER||||||||||1) FN4142-S.SNP.11:15792112 chr11:015792112 0 W/15792112-15792112 FN4142-S SNP C -> A AC=1;AN=170;BQB=0.340785;DP=2146;DP4=1005,1076,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2172e-05;MQSB=0.999706;RPB=0.992273;SGB=31.4354;VDB=0.92114;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.11:15792451 chr11:015792451 0 W/15792451-15792451 FN948-S Single Base Substitution T-A INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2797-S.SNP.11:15795434 chr11:015795434 0 W/15795434-15795434 FN2797-S SNP G -> A AC=1;AN=198;BQB=0.713261;DP=4332;DP4=2088,2048,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.08397e-06;MQSB=0.780237;RPB=0.227791;SGB=40.3588;VDB=0.0155773;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R550|1251|LOC_Os11g27440|protein_coding|CODING|LOC_Os11g27440.1|2|1) FN3810-S.SNP.11:15801757 chr11:015801757 0 W/15801757-15801757 FN3810-S SNP C -> G AC=1;AN=190;BQB=0.979812;DP=2726;DP4=1359,1286,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98942e-06;MQSB=0.998663;RPB=0.916144;SGB=21.8853;VDB=0.107081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.11:15807926 chr11:015807926 0 W/15807926-15807926 FN3436-S SNP T -> G AC=1;AN=184;BQB=0.814288;DP=2748;DP4=1382,1246,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.49692e-09;MQSB=0.999999;RPB=0.797301;SGB=18.2315;VDB=0.286399;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.11:15816209 chr11:015816209 0 W/15816209-15816209 FN1538-S Single Base Substitution G-A INTRON Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN4202-S.SNP.11:15817398 chr11:015817398 0 W/15817398-15817398 FN4202-S SNP G -> T AC=1;AN=170;BQB=0.981057;DP=2561;DP4=1199,1272,16,11;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.18379e-09;MQSB=0.00385182;RPB=0.521796;SGB=83.0751;VDB=0.657334;EFF=INTERGENIC(MODIFIER||||||||||1) FN_788-1-1.SNP.11:15819086 chr11:015819086 0 W/15819086-15819086 FN_788-1-1 Single Base Substitution A-G HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2496.SNP.11:15823923 chr11:015823923 0 W/15823923-15823923 FN2496 SNP T -> G AC=1;AN=200;BQB=0.0845683;DP=4113;DP4=2018,1720,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00218818;MQB=1.16543e-09;MQSB=0.901097;RPB=0.385861;SGB=-59.7054;VDB=0.938551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1444-S.SNP.11:15824640 chr11:015824640 0 W/15824640-15824640 FN1444-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g27510 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1261-S.SNP.11:15828082 chr11:015828082 0 W/15828082-15828082 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1217-S.SNP.11:15828703 chr11:015828703 0 W/15828703-15828703 FN1217-S Single Base Substitution G-A INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN3353-S.SNP.11:15829795 chr11:015829795 0 W/15829795-15829795 FN3353-S SNP G -> A AC=1;AN=184;BQB=0.995734;DP=3818;DP4=1822,1875,15,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.30573e-14;MQSB=0.792017;RPB=0.774958;SGB=112.047;VDB=0.139649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.11:15830166 chr11:015830166 0 W/15830166-15830166 FN2204-S SNP A -> T AC=1;AN=190;BQB=0.179049;DP=2636;DP4=1389,659,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=7.16786e-05;MQSB=0.0237496;RPB=0.984685;SGB=13.4442;VDB=0.555357;EFF=INTERGENIC(MODIFIER||||||||||1) FN-397.SNP.11:15833045 chr11:015833045 0 W/15833045-15833045 FN-397 Single Base Substitution C-G INTRON HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2555-S.SNP.11:15857202 chr11:015857202 0 W/15857202-15857202 FN2555-S SNP G -> A AC=1;AN=198;BQB=0.860574;DP=4278;DP4=2054,1997,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.16146e-17;MQSB=0.967305;RPB=0.306503;SGB=63.0809;VDB=0.689757;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.11:15863252 chr11:015863252 0 W/15863252-15863252 FN874-S Single Base Substitution C-T INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2146-S.SNP.11:15864208 chr11:015864208 0 W/15864208-15864208 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.417657;DP=4420;DP4=2302,2087,13,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.07552e-07;MQSB=0.971855;RPB=0.602452;SGB=-38.3665;VDB=0.113092;EFF=INTERGENIC(MODIFIER||||||||||1) FN-214.SNP.11:15869382 chr11:015869382 0 W/15869382-15869382 FN-214 Single Base Substitution C-T INTERGENIC HET SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2351.SNP.11:15873790 chr11:015873790 0 W/15873790-15873790 FN2351 SNP C -> G AC=1;AN=192;BQB=0.991093;DP=4512;DP4=1996,2208,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.46697e-08;MQSB=0.11172;RPB=0.781891;SGB=21.2209;VDB=0.372984;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.11:15876750 chr11:015876750 0 W/15876750-15876750 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.990282;DP=3029;DP4=1465,1470,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85358e-08;MQSB=0.939083;RPB=0.886164;SGB=66.8296;VDB=0.00447768;EFF=INTRON(MODIFIER||||431|LOC_Os11g27570|protein_coding|CODING|LOC_Os11g27570.1|3|1) FN3663-S.SNP.11:15877004 chr11:015877004 0 W/15877004-15877004 FN3663-S SNP G -> C AC=1;AN=190;BQB=0.946906;DP=2514;DP4=1377,1065,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000176084;MQSB=0.411819;RPB=0.30985;SGB=21.8853;VDB=0.900643;EFF=INTRON(MODIFIER||||431|LOC_Os11g27570|protein_coding|CODING|LOC_Os11g27570.1|4|1) FN455-S.SNP.11:15882916 chr11:015882916 0 W/15882916-15882916 FN455-S Single Base Substitution T-C INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN2223-S.SNP.11:15882963 chr11:015882963 0 W/15882963-15882963 FN2223-S SNP G -> C AC=1;AN=190;BQB=0.89546;DP=4994;DP4=2526,2031,13,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98479e-12;MQSB=0.976554;RPB=0.683707;SGB=-6.57546;VDB=0.407927;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.11:15882963 chr11:015882963 0 W/15882963-15882963 FN908-S Single Base Substitution G-C INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN3687-S.SNP.11:15884647 chr11:015884647 0 W/15884647-15884647 FN3687-S SNP C -> A AC=1;AN=190;BQB=0.424456;DP=2416;DP4=1349,985,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000414281;MQSB=0.941029;RPB=0.647044;SGB=28.9929;VDB=0.628403;EFF=INTRON(MODIFIER||||170|LOC_Os11g27580|protein_coding|CODING|LOC_Os11g27580.1|2|1) FN3889-S.SNP.11:15885953 chr11:015885953 0 W/15885953-15885953 FN3889-S SNP C -> T AC=2;AN=158;BQB=0.958379;DP=1774;DP4=773,906,8,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.49331e-10;MQSB=0.997521;RPB=0.386797;SGB=99.5005;VDB=0.532686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.11:15897045 chr11:015897045 0 W/15897045-15897045 FN2366 SNP C -> T AC=2;AN=192;BQB=0.997215;DP=5163;DP4=2340,2415,18,35;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.40584e-30;MQSB=0.998425;RPB=0.752031;SGB=-51.4469;VDB=0.963977;EFF=INTERGENIC(MODIFIER||||||||||1) FN4275-S.SNP.11:15901164 chr11:015901164 0 W/15901164-15901164 FN4275-S SNP T -> A AC=2;AN=170;BQB=0.355979;DP=2458;DP4=1192,1197,11,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.87643e-11;MQSB=0.963378;RPB=0.995868;SGB=96.7413;VDB=0.843465;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.11:15902776 chr11:015902776 0 W/15902776-15902776 FN_N1-169-1 Single Base Substitution C-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN-251.SNP.11:15907795 chr11:015907795 0 W/15907795-15907795 FN-251 Single Base Substitution A-G INTERGENIC HET SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN4022-S.SNP.11:15908275 chr11:015908275 0 W/15908275-15908275 FN4022-S SNP A -> C AC=2;AN=168;BQB=0.829764;DP=2836;DP4=1477,1183,16,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.19858e-10;MQSB=0.924056;RPB=0.651737;SGB=46.4929;VDB=0.135793;EFF=INTERGENIC(MODIFIER||||||||||1) FN-153.SNP.11:15917110 chr11:015917110 0 W/15917110-15917110 FN-153 Single Base Substitution G-A INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN3432-S.SNP.11:15933379 chr11:015933379 0 W/15933379-15933379 FN3432-S SNP T -> A AC=1;AN=184;BQB=0.950181;DP=2588;DP4=894,1619,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66492e-06;MQSB=0.345232;RPB=0.826013;SGB=39.699;VDB=0.42619;EFF=INTRON(MODIFIER||||260|LOC_Os11g27670|protein_coding|CODING|LOC_Os11g27670.1|1|1) FN2639-S.SNP.11:15937347 chr11:015937347 0 W/15937347-15937347 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.877377;DP=4545;DP4=2176,2090,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.83878e-14;MQSB=0.99841;RPB=0.240514;SGB=69.1109;VDB=0.831797;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q50|169|LOC_Os11g27690|protein_coding|CODING|LOC_Os11g27690.1|1|1) FN2296.SNP.11:15937699 chr11:015937699 0 W/15937699-15937699 FN2296 SNP C -> A AC=2;AN=192;BQB=0.36005;DP=4800;DP4=2200,2242,26,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.64515e-29;MQSB=0.999993;RPB=0.980531;SGB=4.98351;VDB=0.214497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.11:15940796 chr11:015940796 0 W/15940796-15940796 FN3478-S SNP C -> T AC=2;AN=184;BQB=0.81405;DP=3531;DP4=1963,1482,22,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.43061e-19;MQSB=0.996618;RPB=0.964074;SGB=175.352;VDB=0.48487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.11:15945416 chr11:015945416 0 W/15945416-15945416 FN2150-S SNP G -> T AC=1;AN=168;BQB=4.50684e-05;DP=3300;DP4=1708,1558,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.00654e-07;MQSB=0.999078;RPB=0.99373;SGB=-98.0622;VDB=0.476318;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.11:15951812 chr11:015951812 0 W/15951812-15951812 FN768-S Single Base Substitution C-T INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN948-S.SNP.11:15952487 chr11:015952487 0 W/15952487-15952487 FN948-S Single Base Substitution A-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. W481-5-1.SNP.11:15954708 chr11:015954708 0 W/15954708-15954708 W481-5-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. 701-6.SNP.11:15955217 chr11:015955217 0 W/15955217-15955217 701-6 Single Base Substitution T-A INTERGENIC Homo SNo: 1440, Mutant_ID: 701-6, Generation: M2, Mutations: 27, Genes: 15, Seed availability: Yes. FN2464.SNP.11:15956569 chr11:015956569 0 W/15956569-15956569 FN2464 SNP G -> T AC=1;AN=200;BQB=0.924421;DP=5061;DP4=2310,2398,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000197589;MQB=1.25341e-14;MQSB=0.996141;RPB=0.290619;SGB=50.3263;VDB=0.918059;EFF=UTR_3_PRIME(MODIFIER||299||513|LOC_Os11g27730|protein_coding|CODING|LOC_Os11g27730.1|3|1),UTR_3_PRIME(MODIFIER||742||340|LOC_Os11g27730|protein_coding|CODING|LOC_Os11g27730.2|4|1) FN-178.SNP.11:15959786 chr11:015959786 0 W/15959786-15959786 FN-178 Single Base Substitution G-C INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN754-S.SNP.11:15960931 chr11:015960931 0 W/15960931-15960931 FN754-S Single Base Substitution C-T INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN973-S.SNP.11:15961072 chr11:015961072 0 W/15961072-15961072 FN973-S Single Base Substitution A-G INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN972-S.SNP.11:15961271 chr11:015961271 0 W/15961271-15961271 FN972-S Single Base Substitution C-T INTERGENIC HET SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN524-S.SNP.11:15962234 chr11:015962234 0 W/15962234-15962234 FN524-S Single Base Substitution G-A INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN_815-4-1.SNP.11:15962390 chr11:015962390 0 W/15962390-15962390 FN_815-4-1 Single Base Substitution G-T HET SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN1121-S.SNP.11:15963208 chr11:015963208 0 W/15963208-15963208 FN1121-S Single Base Substitution C-T INTERGENIC HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN1121-S.SNP.11:15963209 chr11:015963209 0 W/15963209-15963209 FN1121-S Single Base Substitution C-T INTERGENIC HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN4247-S.SNP.11:15969834 chr11:015969834 0 W/15969834-15969834 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.974182;DP=2547;DP4=1144,1350,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.3151e-06;MQSB=0.918813;RPB=0.805601;SGB=34.5445;VDB=0.617041;EFF=INTRON(MODIFIER||||587|LOC_Os11g27740|protein_coding|CODING|LOC_Os11g27740.1|7|1) FN2152-S.SNP.11:15979548 chr11:015979548 0 W/15979548-15979548 FN2152-S SNP G -> A AC=1;AN=168;BQB=0.071639;DP=3665;DP4=1704,1909,8,20;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.92015e-11;MQSB=0.511044;RPB=0.93608;SGB=-108.339;VDB=0.132269;EFF=INTERGENIC(MODIFIER||||||||||1) FN445-S.SNP.11:15984541 chr11:015984541 0 W/15984541-15984541 FN445-S Single Base Substitution G-A INTRON HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2231-S.SNP.11:15988204 chr11:015988204 0 W/15988204-15988204 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.44423;DP=5206;DP4=2392,2483,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.6325e-10;MQSB=0.999003;RPB=0.86615;SGB=-14.8836;VDB=0.287158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E96K|360|LOC_Os11g27770|protein_coding|CODING|LOC_Os11g27770.1|2|1) FN-304.SNP.11:15990726 chr11:015990726 0 W/15990726-15990726 FN-304 Single Base Substitution A-T INTERGENIC HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1514-S.SNP.11:15990743 chr11:015990743 0 W/15990743-15990743 FN1514-S Single Base Substitution T-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1484-S.SNP.11:15996314 chr11:015996314 0 W/15996314-15996314 FN1484-S Single Base Substitution A-T INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1484-S.SNP.11:15996353 chr11:015996353 0 W/15996353-15996353 FN1484-S Single Base Substitution A-G INTERGENIC Homo SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN3890-S.SNP.11:15998952 chr11:015998952 0 W/15998952-15998952 FN3890-S SNP G -> A AC=1;AN=158;BQB=0.970462;DP=2040;DP4=1145,776,9,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.49407e-07;MQSB=0.632607;RPB=0.565592;SGB=54.2901;VDB=0.11217;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.11:16006699 chr11:016006699 0 W/16006699-16006699 FN4305-S SNP C -> T AC=1;AN=170;BQB=0.771558;DP=2650;DP4=1300,1303,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.78379e-06;MQSB=0.992738;RPB=0.994494;SGB=43.4296;VDB=0.860218;EFF=UTR_3_PRIME(MODIFIER||1309||116|LOC_Os11g27799|protein_coding|CODING|LOC_Os11g27799.1|1|1) FN1679-S.SNP.11:16012961 chr11:016012961 0 W/16012961-16012961 FN1679-S SNP A -> C AC=2;AN=188;BQB=0.439227;DP=2442;DP4=1099,1291,24,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.68471e-17;MQSB=0.885864;RPB=0.666259;SGB=-45.1285;VDB=0.915821;EFF=INTRON(MODIFIER||||287|LOC_Os11g27810|protein_coding|CODING|LOC_Os11g27810.1|1|1) FN3690-S.SNP.11:16013797 chr11:016013797 0 W/16013797-16013797 FN3690-S SNP C -> T AC=1;AN=190;BQB=0.692164;DP=2848;DP4=1359,1390,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000109083;MQSB=0.969782;RPB=0.894981;SGB=10.8904;VDB=0.832735;EFF=INTRON(MODIFIER||||287|LOC_Os11g27810|protein_coding|CODING|LOC_Os11g27810.1|3|1) FN743-S.SNP.11:16015439 chr11:016015439 0 W/16015439-16015439 FN743-S Single Base Substitution G-A INTERGENIC HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN-233.SNP.11:16018000 chr11:016018000 0 W/16018000-16018000 FN-233 Single Base Substitution T-G INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3431-S.SNP.11:16018122 chr11:016018122 0 W/16018122-16018122 FN3431-S SNP A -> G AC=2;AN=184;BQB=0.216825;DP=3318;DP4=1821,1373,13,9;HOB=0.0215028;ICB=0.494625;MQ=45;MQ0F=0.00783605;MQB=2.92821e-06;MQSB=3.8892e-06;RPB=0.974627;SGB=14.4113;VDB=0.707517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.11:16018122 chr11:016018122 0 W/16018122-16018122 FN3909-S SNP A -> G AC=2;AN=158;BQB=0.867621;DP=2633;DP4=1275,1246,10,11;HOB=0.024996;ICB=0.493752;MQ=44;MQ0F=0.00987467;MQB=0.000154244;MQSB=0.0099512;RPB=0.919699;SGB=86.3921;VDB=0.0532458;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.11:16018122 chr11:016018122 0 W/16018122-16018122 FN848-S Single Base Substitution A-G INTERGENIC HOMO SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN354-S.SNP.11:16020005 chr11:016020005 0 W/16020005-16020005 FN354-S Single Base Substitution C-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN2322.SNP.11:16022385 chr11:016022385 0 W/16022385-16022385 FN2322 SNP G -> C AC=1;AN=192;BQB=0.104666;DP=4780;DP4=2449,1979,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.16357e-09;MQSB=0.999878;RPB=0.121567;SGB=-70.2434;VDB=0.958702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.11:16022657 chr11:016022657 0 W/16022657-16022657 FN1193-S Single Base Substitution G-T INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3430-S.SNP.11:16027296 chr11:016027296 0 W/16027296-16027296 FN3430-S SNP G -> C AC=1;AN=184;BQB=0.999558;DP=2826;DP4=1548,1199,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.027247;MQB=1.26253e-07;MQSB=8.44102e-05;RPB=0.967218;SGB=89.4385;VDB=0.770633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3342-S.SNP.11:16034368 chr11:016034368 0 W/16034368-16034368 FN3342-S SNP G -> C AC=1;AN=184;BQB=0.507493;DP=3864;DP4=1858,1857,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.146222;MQB=0.978869;MQSB=4.66611e-21;RPB=0.756256;SGB=39.2697;VDB=0.853048;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.11:16034828 chr11:016034828 0 W/16034828-16034828 FN1227-S Single Base Substitution C-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1277-S.SNP.11:16034828 chr11:016034828 0 W/16034828-16034828 FN1277-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2297.SNP.11:16034828 chr11:016034828 0 W/16034828-16034828 FN2297 SNP C -> T AC=2;AN=192;BQB=0.823969;DP=4707;DP4=2194,2226,21,14;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.54015e-19;MQSB=0.0266056;RPB=0.450499;SGB=114.631;VDB=0.163589;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.11:16034828 chr11:016034828 0 W/16034828-16034828 FN3422-S SNP C -> T AC=2;AN=184;BQB=0.820657;DP=2694;DP4=1206,1373,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.81593e-06;MQSB=0.0181198;RPB=0.437997;SGB=62.3078;VDB=0.276014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.11:16034828 chr11:016034828 0 W/16034828-16034828 FN3848-S SNP C -> T AC=1;AN=158;BQB=0.981928;DP=2401;DP4=1072,1200,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=1.0323e-08;MQSB=0.0108578;RPB=0.985439;SGB=47.5512;VDB=0.148175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.11:16038284 chr11:016038284 0 W/16038284-16038284 FN3437-S SNP C -> A AC=1;AN=184;BQB=0.287244;DP=2663;DP4=1195,1388,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0022365;MQSB=0.99875;RPB=0.90671;SGB=30.6558;VDB=0.346875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.11:16039070 chr11:016039070 0 W/16039070-16039070 FN-163 Single Base Substitution C-T INTERGENIC HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN-288.SNP.11:16040093 chr11:016040093 0 W/16040093-16040093 FN-288 Single Base Substitution T-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2411.SNP.11:16044662 chr11:016044662 0 W/16044662-16044662 FN2411 SNP C -> G AC=1;AN=200;BQB=0.740648;DP=4244;DP4=1895,2027,20,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.44888e-19;MQSB=0.998972;RPB=0.992769;SGB=41.5933;VDB=0.753227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1203-S.SNP.11:16048319 chr11:016048319 0 W/16048319-16048319 FN1203-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1221-S.SNP.11:16054882 chr11:016054882 0 W/16054882-16054882 FN1221-S Single Base Substitution C-T INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN4234-S.SNP.11:16054912 chr11:016054912 0 W/16054912-16054912 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.966456;DP=2498;DP4=1104,1317,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.04399e-06;MQSB=0.996985;RPB=0.940203;SGB=27.9928;VDB=0.337964;EFF=INTRON(MODIFIER||||436|LOC_Os11g27890|protein_coding|CODING|LOC_Os11g27890.1|2|1) FN428-S.SNP.11:16059261 chr11:016059261 0 W/16059261-16059261 FN428-S Single Base Substitution A-C INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN-403.SNP.11:16060939 chr11:016060939 0 W/16060939-16060939 FN-403 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN2134-S.SNP.11:16062778 chr11:016062778 0 W/16062778-16062778 FN2134-S SNP A -> T AC=1;AN=168;BQB=0.172336;DP=3385;DP4=1673,1646,18,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57339e-16;MQSB=0.43451;RPB=0.940566;SGB=-8.04863;VDB=0.988041;EFF=INTRON(MODIFIER||||615|LOC_Os11g27910|protein_coding|CODING|LOC_Os11g27910.1|3|1) FN3799-S.SNP.11:16064622 chr11:016064622 0 W/16064622-16064622 FN3799-S SNP G -> C AC=1;AN=190;BQB=0.814291;DP=2780;DP4=1324,1368,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.38788e-08;MQSB=0.92799;RPB=0.861522;SGB=58.2031;VDB=0.894812;EFF=INTRON(MODIFIER||||599|LOC_Os11g27920|protein_coding|CODING|LOC_Os11g27920.1|6|1) FN1445-S.SNP.11:16069363 chr11:016069363 0 W/16069363-16069363 FN1445-S Single Base Substitution G-T INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3372-S.SNP.11:16071961 chr11:016071961 0 W/16071961-16071961 FN3372-S SNP C -> A AC=1;AN=184;BQB=0.966538;DP=2959;DP4=1383,1476,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.587e-05;MQSB=0.93323;RPB=0.811571;SGB=14.6182;VDB=0.298692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1236-S.SNP.11:16073285 chr11:016073285 0 W/16073285-16073285 FN1236-S Single Base Substitution A-C INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN1473-S.SNP.11:16074557 chr11:016074557 0 W/16074557-16074557 FN1473-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os11g27940 expressed protein SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN682-S.SNP.11:16079426 chr11:016079426 0 W/16079426-16079426 FN682-S Single Base Substitution T-C INTERGENIC HOMO SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2209-S.SNP.11:16082997 chr11:016082997 0 W/16082997-16082997 FN2209-S SNP C -> T AC=1;AN=190;BQB=0.87452;DP=5132;DP4=2245,2392,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000389712;MQB=3.14323e-10;MQSB=0.987672;RPB=0.897593;SGB=-67.5498;VDB=0.838208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P214S|258|LOC_Os11g27960|protein_coding|CODING|LOC_Os11g27960.1|2|1) FN584-S.SNP.11:16083425 chr11:016083425 0 W/16083425-16083425 FN584-S Single Base Substitution A-C INTRON HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN2378.SNP.11:16083527 chr11:016083527 0 W/16083527-16083527 FN2378 SNP G -> A AC=1;AN=192;BQB=0.981188;DP=4950;DP4=2469,2179,23,11;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0010101;MQB=1.85268e-05;MQSB=6.87034e-06;RPB=0.19734;SGB=149.626;VDB=0.134895;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R250|258|LOC_Os11g27960|protein_coding|CODING|LOC_Os11g27960.1|3|1) FN3387-S.SNP.11:16084954 chr11:016084954 0 W/16084954-16084954 FN3387-S SNP G -> T AC=1;AN=184;BQB=0.999577;DP=2674;DP4=1113,1461,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32062e-05;MQSB=0.984476;RPB=0.892958;SGB=10.6662;VDB=0.443221;EFF=INTERGENIC(MODIFIER||||||||||1) FN2533-S.SNP.11:16096940 chr11:016096940 0 W/16096940-16096940 FN2533-S SNP C -> T AC=2;AN=198;BQB=0.455546;DP=4255;DP4=2116,1879,16,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.24579e-15;MQSB=0.271672;RPB=0.987216;SGB=83.2905;VDB=0.94467;EFF=INTRON(MODIFIER||||160|LOC_Os11g28000|protein_coding|CODING|LOC_Os11g28000.1|1|1) FN1016-S.SNP.11:16097140 chr11:016097140 0 W/16097140-16097140 FN1016-S Single Base Substitution T-C INTRON HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1249-S.SNP.11:16097507 chr11:016097507 0 W/16097507-16097507 FN1249-S Single Base Substitution C-T INTRON HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN4314-S.SNP.11:16099537 chr11:016099537 0 W/16099537-16099537 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.926971;DP=1918;DP4=713,1129,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.21589e-07;MQSB=0.983175;RPB=0.894437;SGB=61.2001;VDB=0.539953;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.11:16099563 chr11:016099563 0 W/16099563-16099563 FN4177-S SNP A -> G AC=1;AN=170;BQB=0.982948;DP=1909;DP4=722,1120,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.15768e-08;MQSB=0.866226;RPB=0.750794;SGB=38.3207;VDB=0.00387563;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.11:16101895 chr11:016101895 0 W/16101895-16101895 FN953-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g28010 hypothetical protein SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN-138.SNP.11:16104142 chr11:016104142 0 W/16104142-16104142 FN-138 Single Base Substitution G-A INTERGENIC HET SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN2271-S.SNP.11:16104838 chr11:016104838 0 W/16104838-16104838 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.659212;DP=4925;DP4=2283,2367,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20761e-05;MQSB=0.988208;RPB=0.733388;SGB=15.9981;VDB=0.249604;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.11:16104955 chr11:016104955 0 W/16104955-16104955 FN2439 SNP G -> A AC=2;AN=200;BQB=0.989921;DP=4799;DP4=2102,2402,15,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.85693e-15;MQSB=0.997902;RPB=0.303722;SGB=22.3313;VDB=0.402677;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.11:16105927 chr11:016105927 0 W/16105927-16105927 FN2173-S SNP C -> A AC=2;AN=168;BQB=0.0969402;DP=2407;DP4=911,1433,17,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.22318e-15;MQSB=0.907272;RPB=0.465037;SGB=-25.2325;VDB=0.103388;EFF=INTERGENIC(MODIFIER||||||||||1) FN3658-S.SNP.11:16107868 chr11:016107868 0 W/16107868-16107868 FN3658-S SNP G -> A AC=1;AN=190;BQB=0.986889;DP=2492;DP4=1411,967,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.38498e-05;MQSB=0.997104;RPB=0.936133;SGB=10.8904;VDB=0.998256;EFF=INTERGENIC(MODIFIER||||||||||1) FN2475.SNP.11:16111503 chr11:016111503 0 W/16111503-16111503 FN2475 SNP T -> G AC=1;AN=200;BQB=0.930125;DP=4608;DP4=2148,2186,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.95756e-10;MQSB=0.988094;RPB=0.859446;SGB=58.2954;VDB=0.870071;EFF=INTERGENIC(MODIFIER||||||||||1) FN1327-S.SNP.11:16112098 chr11:016112098 0 W/16112098-16112098 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3347-S.SNP.11:16112627 chr11:016112627 0 W/16112627-16112627 FN3347-S SNP C -> T AC=1;AN=184;BQB=0.798153;DP=3070;DP4=1222,1635,10,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29921e-10;MQSB=0.531248;RPB=0.999726;SGB=92.0965;VDB=0.942098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.11:16118085 chr11:016118085 0 W/16118085-16118085 FN1506-S Single Base Substitution A-G INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1042-S.SNP.11:16119841 chr11:016119841 0 W/16119841-16119841 FN1042-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN3980-S.SNP.11:16128172 chr11:016128172 0 W/16128172-16128172 FN3980-S SNP C -> A AC=1;AN=168;BQB=0.979645;DP=2655;DP4=1282,1262,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000376648;MQB=0.000168291;MQSB=0.976951;RPB=0.276468;SGB=38.8805;VDB=0.589022;EFF=INTRON(MODIFIER||||663|LOC_Os11g28050|protein_coding|CODING|LOC_Os11g28050.1|6|1) FN443-S.SNP.11:16129523 chr11:016129523 0 W/16129523-16129523 FN443-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN_552-1-1.SNP.11:16134403 chr11:016134403 0 W/16134403-16134403 FN_552-1-1 Single Base Substitution G-A HET SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3775-S.SNP.11:16137622 chr11:016137622 0 W/16137622-16137622 FN3775-S SNP C -> G AC=1;AN=190;BQB=0.96913;DP=2522;DP4=1305,1127,6,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.40349e-12;MQSB=0.999998;RPB=0.705619;SGB=80.9724;VDB=0.922758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Gtg|L165V|192|LOC_Os11g28070|protein_coding|CODING|LOC_Os11g28070.1|4|1) FN1514-S.SNP.11:16140202 chr11:016140202 0 W/16140202-16140202 FN1514-S Single Base Substitution T-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1392-S.SNP.11:16142767 chr11:016142767 0 W/16142767-16142767 FN1392-S Single Base Substitution G-A INTERGENIC HET SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3512-S.SNP.11:16150408 chr11:016150408 0 W/16150408-16150408 FN3512-S SNP G -> A AC=1;AN=188;BQB=0.92131;DP=2928;DP4=1436,1413,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02525e-06;MQSB=0.973152;RPB=0.987698;SGB=39.8925;VDB=0.990276;EFF=INTRON(MODIFIER||||643|LOC_Os11g28104|protein_coding|CODING|LOC_Os11g28104.1|1|1) FN901-S.SNP.11:16153168 chr11:016153168 0 W/16153168-16153168 FN901-S Single Base Substitution G-A INTRON HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN-210.SNP.11:16157178 chr11:016157178 0 W/16157178-16157178 FN-210 Single Base Substitution T-A INTRON HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3836-S.SNP.11:16157918 chr11:016157918 0 W/16157918-16157918 FN3836-S SNP A -> G AC=1;AN=190;BQB=0.824669;DP=2660;DP4=1378,1206,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02148e-07;MQSB=0.99128;RPB=0.993309;SGB=36.1006;VDB=0.604715;EFF=INTRON(MODIFIER||||643|LOC_Os11g28104|protein_coding|CODING|LOC_Os11g28104.1|1|1) FN1412-S.SNP.11:16159965 chr11:016159965 0 W/16159965-16159965 FN1412-S Single Base Substitution A-G INTRON HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2721-S.SNP.11:16159965 chr11:016159965 0 W/16159965-16159965 FN2721-S SNP A -> G AC=2;AN=200;BQB=0.999798;DP=4806;DP4=2314,2222,16,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.73714e-17;MQSB=0.990466;RPB=0.489991;SGB=101.557;VDB=0.608811;EFF=INTRON(MODIFIER||||643|LOC_Os11g28104|protein_coding|CODING|LOC_Os11g28104.1|1|1) FN4155-S.SNP.11:16162617 chr11:016162617 0 W/16162617-16162617 FN4155-S SNP G -> A AC=1;AN=170;BQB=0.987805;DP=2276;DP4=1054,1161,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.56802e-08;MQSB=0.993885;RPB=0.691135;SGB=47.8722;VDB=0.911836;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.11:16162639 chr11:016162639 0 W/16162639-16162639 FN355-S Single Base Substitution G-T INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2625-S.SNP.11:16163574 chr11:016163574 0 W/16163574-16163574 FN2625-S SNP C -> T AC=2;AN=200;BQB=0.0262767;DP=3938;DP4=2061,1559,17,22;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=6.8948e-16;MQSB=0.6738;RPB=0.988375;SGB=130.399;VDB=0.657319;EFF=START_GAINED(LOW||||102|LOC_Os11g28130|protein_coding|CODING|LOC_Os11g28130.1|1|1),UTR_5_PRIME(MODIFIER||151||102|LOC_Os11g28130|protein_coding|CODING|LOC_Os11g28130.1|1|1) FN-365.SNP.11:16164231 chr11:016164231 0 W/16164231-16164231 FN-365 Single Base Substitution T-C UTR_3_PRIME HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN818-S.SNP.11:16166020 chr11:016166020 0 W/16166020-16166020 FN818-S Single Base Substitution G-A INTERGENIC HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN2542-S.SNP.11:16168869 chr11:016168869 0 W/16168869-16168869 FN2542-S SNP C -> A AC=1;AN=198;BQB=0.926617;DP=4128;DP4=2048,1848,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.71491e-10;MQSB=0.999929;RPB=0.992375;SGB=61.7198;VDB=0.657065;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.11:16188216 chr11:016188216 0 W/16188216-16188216 FN784-S Single Base Substitution G-A INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN-274.SNP.11:16191804 chr11:016191804 0 W/16191804-16191804 FN-274 Single Base Substitution C-T INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN3343-S.SNP.11:16196624 chr11:016196624 0 W/16196624-16196624 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.989439;DP=2644;DP4=1282,1278,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.61269e-06;MQSB=0.990948;RPB=0.701196;SGB=28.7043;VDB=0.100284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.11:16202096 chr11:016202096 0 W/16202096-16202096 FN3325-S SNP G -> T AC=2;AN=184;BQB=0.597207;DP=2805;DP4=1089,1569,15,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.38296e-16;MQSB=0.992382;RPB=0.310233;SGB=29.6292;VDB=0.00748173;EFF=INTERGENIC(MODIFIER||||||||||1) FN-307.SNP.11:16202128 chr11:016202128 0 W/16202128-16202128 FN-307 Single Base Substitution A-T INTERGENIC HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-307.SNP.11:16202129 chr11:016202129 0 W/16202129-16202129 FN-307 Single Base Substitution A-T INTERGENIC HOMO SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN-368.SNP.11:16203498 chr11:016203498 0 W/16203498-16203498 FN-368 Single Base Substitution G-A INTERGENIC HET SNo: 357, Mutant_ID: FN-368, Generation: M2, Mutations: 48, Genes: 17, Seed availability: Yes. FN1385-S.SNP.11:16205953 chr11:016205953 0 W/16205953-16205953 FN1385-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-265.SNP.11:16207586 chr11:016207586 0 W/16207586-16207586 FN-265 Single Base Substitution G-C UTR_5_PRIME HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1526-S.SNP.11:16212293 chr11:016212293 0 W/16212293-16212293 FN1526-S Single Base Substitution A-G INTRON HET SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN-13.SNP.11:16214207 chr11:016214207 0 W/16214207-16214207 FN-13 Single Base Substitution G-A INTERGENIC HOMO SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN-13.SNP.11:16214207 chr11:016214207 0 W/16214207-16214207 FN-13 Single Base Substitution G-A INTERGENIC Homo SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN2701-S.SNP.11:16214270 chr11:016214270 0 W/16214270-16214270 FN2701-S SNP T -> A AC=2;AN=200;BQB=0.990163;DP=4467;DP4=2154,2019,18,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.7025e-20;MQSB=0.884202;RPB=0.00929997;SGB=-4.03268;VDB=0.106378;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.11:16214271 chr11:016214271 0 W/16214271-16214271 FN2701-S SNP G -> T AC=2;AN=200;BQB=0.789016;DP=4483;DP4=2197,2040,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20132e-18;MQSB=0.940631;RPB=0.0412329;SGB=94.3471;VDB=0.340994;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.11:16215675 chr11:016215675 0 W/16215675-16215675 FN744-S Single Base Substitution G-C INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4078-S.SNP.11:16229236 chr11:016229236 0 W/16229236-16229236 FN4078-S SNP G -> T AC=1;AN=182;BQB=0.951867;DP=2572;DP4=1313,1203,6,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.22997e-05;MQSB=0.99838;RPB=0.84647;SGB=39.6007;VDB=0.185182;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.11:16232775 chr11:016232775 0 W/16232775-16232775 FN2202-S SNP C -> T AC=1;AN=190;BQB=0.0120431;DP=4145;DP4=1925,1813,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00120627;MQB=1.7935e-09;MQSB=0.0123691;RPB=0.507718;SGB=-110.863;VDB=0.506206;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A504|993|LOC_Os11g28230|protein_coding|CODING|LOC_Os11g28230.1|5|1) FN-162.SNP.11:16233686 chr11:016233686 0 W/16233686-16233686 FN-162 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g28230 retrotransposon protein, putative, unclassified, expressed SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN4083-S.SNP.11:16235171 chr11:016235171 0 W/16235171-16235171 FN4083-S SNP G -> T AC=1;AN=182;BQB=0.980571;DP=3383;DP4=1713,1530,10,14;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.0070943;MQB=2.11456e-12;MQSB=0.0282866;RPB=0.762549;SGB=102.753;VDB=0.991094;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.11:16249100 chr11:016249100 0 W/16249100-16249100 FN973-S Single Base Substitution C-T INTERGENIC HOMO SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN1158-S.SNP.11:16254741 chr11:016254741 0 W/16254741-16254741 FN1158-S Single Base Substitution T-C INTRON HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN1430-S.SNP.11:16255082 chr11:016255082 0 W/16255082-16255082 FN1430-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN790-S.SNP.11:16262716 chr11:016262716 0 W/16262716-16262716 FN790-S Single Base Substitution T-A INTERGENIC HET SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN988-S.SNP.11:16278238 chr11:016278238 0 W/16278238-16278238 FN988-S Single Base Substitution A-C INTRON HET SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3751-S.SNP.11:16284722 chr11:016284722 0 W/16284722-16284722 FN3751-S SNP C -> T AC=2;AN=190;BQB=0.892299;DP=2353;DP4=1119,1148,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.27856e-15;MQSB=0.982118;RPB=0.805622;SGB=82.301;VDB=0.944219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.11:16285235 chr11:016285235 0 W/16285235-16285235 FN2313 SNP A -> G AC=2;AN=192;BQB=0.736876;DP=5399;DP4=2667,2470,26,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.70935e-28;MQSB=0.886272;RPB=0.712591;SGB=-98.9565;VDB=0.172214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.11:16292630 chr11:016292630 0 W/16292630-16292630 FN2563-S SNP A -> T AC=1;AN=198;BQB=0.544388;DP=4124;DP4=1999,1990,12,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.63818e-08;MQSB=0.869494;RPB=0.779358;SGB=58.7391;VDB=0.878175;EFF=INTERGENIC(MODIFIER||||||||||1) FN849-S.SNP.11:16301090 chr11:016301090 0 W/16301090-16301090 FN849-S Single Base Substitution T-A INTERGENIC HOMO SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN1436-S.SNP.11:16304263 chr11:016304263 0 W/16304263-16304263 FN1436-S Single Base Substitution C-A INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN3499-S.SNP.11:16307186 chr11:016307186 0 W/16307186-16307186 FN3499-S SNP T -> A AC=1;AN=188;BQB=0.966348;DP=2799;DP4=1280,1457,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.59427e-09;MQSB=0.996363;RPB=0.995967;SGB=26.0762;VDB=0.754445;EFF=INTRON(MODIFIER||||215|LOC_Os11g28340|protein_coding|CODING|LOC_Os11g28340.1|1|1),INTRON(MODIFIER||||153|LOC_Os11g28340|protein_coding|CODING|LOC_Os11g28340.2|1|1) FN3678-S.SNP.11:16312374 chr11:016312374 0 W/16312374-16312374 FN3678-S SNP C -> T AC=1;AN=190;BQB=0.830012;DP=2370;DP4=1270,991,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000256117;MQSB=0.406767;RPB=0.850606;SGB=39.9877;VDB=0.865097;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.11:16327713 chr11:016327713 0 W/16327713-16327713 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.855944;DP=3266;DP4=1633,1500,12,2;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=9.55103e-05;MQSB=1.56333e-05;RPB=0.6735;SGB=57.786;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3836-S.SNP.11:16343352 chr11:016343352 0 W/16343352-16343352 FN3836-S SNP G -> A AC=1;AN=190;BQB=0.995576;DP=2345;DP4=1062,1177,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.0019759;MQSB=0.706092;RPB=0.999044;SGB=35.4339;VDB=0.335127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.11:16344336 chr11:016344336 0 W/16344336-16344336 FN3293-S SNP C -> A AC=1;AN=184;BQB=0.990315;DP=2283;DP4=1055,1139,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5646e-07;MQSB=0.949468;RPB=0.843798;SGB=48.7425;VDB=0.781161;EFF=INTRON(MODIFIER||||1412|LOC_Os11g28400|protein_coding|CODING|LOC_Os11g28400.1|1|1) FN3452-S.SNP.11:16345123 chr11:016345123 0 W/16345123-16345123 FN3452-S SNP A -> G AC=1;AN=184;BQB=0.50017;DP=2849;DP4=1551,1187,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.02457;MQB=0.238917;MQSB=0.131078;RPB=0.281262;SGB=13.188;VDB=0.741616;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E255G|1412|LOC_Os11g28400|protein_coding|CODING|LOC_Os11g28400.1|2|1) FN3722-S.SNP.11:16346099 chr11:016346099 0 W/16346099-16346099 FN3722-S SNP G -> C AC=1;AN=190;BQB=0.988096;DP=2219;DP4=807,1311,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45847e-06;MQSB=0.969026;RPB=0.932899;SGB=25.439;VDB=0.348463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K580N|1412|LOC_Os11g28400|protein_coding|CODING|LOC_Os11g28400.1|2|1) FN-278.SNP.11:16347208 chr11:016347208 0 W/16347208-16347208 FN-278 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g28400 retrotransposon protein, putative, unclassified, expressed SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN_772-3-1.SNP.11:16350234 chr11:016350234 0 W/16350234-16350234 FN_772-3-1 Single Base Substitution A-G HET LOC_Os11g28410 retrotransposon protein, putative, unclassified, expressed SNo: 1480, Mutant_ID: FN_772-3-1, Generation: M3, Mutations: 55, Genes: 19, Seed availability: Yes. FN2492.SNP.11:16353231 chr11:016353231 0 W/16353231-16353231 FN2492 SNP C -> A AC=1;AN=200;BQB=0.684725;DP=5008;DP4=2465,2266,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4372e-11;MQSB=0.996008;RPB=0.447596;SGB=12.7003;VDB=0.183457;EFF=INTRON(MODIFIER||||1040|LOC_Os11g28410|protein_coding|CODING|LOC_Os11g28410.1|2|1) FN3484-S.SNP.11:16367043 chr11:016367043 0 W/16367043-16367043 FN3484-S SNP G -> T AC=1;AN=184;BQB=0.997585;DP=2790;DP4=1340,1279,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.3733e-08;MQSB=0.99167;RPB=0.934018;SGB=66.8296;VDB=0.346753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.11:16375193 chr11:016375193 0 W/16375193-16375193 FN1309-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g28440 retrotransposon protein, putative, Ty1-copia subclass SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN3979-S.SNP.11:16376062 chr11:016376062 0 W/16376062-16376062 FN3979-S SNP A -> T AC=1;AN=168;BQB=0.6139;DP=2450;DP4=1163,1200,18,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.45879e-14;MQSB=0.973914;RPB=0.0850095;SGB=86.2102;VDB=0.167255;EFF=INTRON(MODIFIER||||170|LOC_Os11g28440|protein_coding|CODING|LOC_Os11g28440.1|3|1) FN2167-S.SNP.11:16379835 chr11:016379835 0 W/16379835-16379835 FN2167-S SNP T -> G AC=2;AN=168;BQB=0.000438371;DP=2705;DP4=955,1692,9,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.06626e-05;MQSB=0.996055;RPB=0.858069;SGB=-39.5049;VDB=0.550435;EFF=INTRON(MODIFIER||||194|LOC_Os11g28460|protein_coding|CODING|LOC_Os11g28460.1|1|1) FN2677-S.SNP.11:16380880 chr11:016380880 0 W/16380880-16380880 FN2677-S SNP A -> C AC=1;AN=200;BQB=0.99841;DP=4920;DP4=2343,2371,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.09165e-14;MQSB=0.999675;RPB=0.929978;SGB=69.1109;VDB=0.176363;EFF=INTERGENIC(MODIFIER||||||||||1) FN2463.SNP.11:16383868 chr11:016383868 0 W/16383868-16383868 FN2463 SNP G -> A AC=1;AN=200;BQB=0.700671;DP=4323;DP4=2074,1994,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7636e-11;MQSB=0.996669;RPB=0.305282;SGB=69.1109;VDB=0.626175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3855-S.SNP.11:16385220 chr11:016385220 0 W/16385220-16385220 FN3855-S SNP C -> T AC=1;AN=158;BQB=0.939738;DP=2053;DP4=991,967,15,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.01373e-13;MQSB=0.981643;RPB=0.711967;SGB=99.5005;VDB=0.580133;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.11:16385278 chr11:016385278 0 W/16385278-16385278 FN-342 Single Base Substitution C-T INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-342.SNP.11:16385279 chr11:016385279 0 W/16385279-16385279 FN-342 Single Base Substitution A-T INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN-314.SNP.11:16391886 chr11:016391886 0 W/16391886-16391886 FN-314 Single Base Substitution G-T INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN-314.SNP.11:16391887 chr11:016391887 0 W/16391887-16391887 FN-314 Single Base Substitution C-T INTRON HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN2545-S.SNP.11:16394235 chr11:016394235 0 W/16394235-16394235 FN2545-S SNP C -> A AC=1;AN=198;BQB=0.705223;DP=4273;DP4=2089,2010,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234028;MQB=1.90197e-09;MQSB=0.987494;RPB=0.935015;SGB=40.149;VDB=0.820154;EFF=INTRON(MODIFIER||||371|LOC_Os11g28480|protein_coding|CODING|LOC_Os11g28480.1|1|1) FN2545-S.SNP.11:16394236 chr11:016394236 0 W/16394236-16394236 FN2545-S SNP A -> G AC=1;AN=198;BQB=0.442797;DP=4275;DP4=2099,2009,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000233918;MQB=7.44031e-09;MQSB=0.974244;RPB=0.999489;SGB=54.144;VDB=0.782113;EFF=INTRON(MODIFIER||||371|LOC_Os11g28480|protein_coding|CODING|LOC_Os11g28480.1|1|1) FN1739-S.SNP.11:16401321 chr11:016401321 0 W/16401321-16401321 FN1739-S SNP C -> T AC=1;AN=188;BQB=0.282253;DP=2342;DP4=756,1546,4,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.40612e-05;MQSB=0.999212;RPB=0.731328;SGB=26.0762;VDB=0.992504;EFF=INTERGENIC(MODIFIER||||||||||1) FN618-S.SNP.11:16411990 chr11:016411990 0 W/16411990-16411990 FN618-S Single Base Substitution T-A INTRON HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN3824-S.SNP.11:16413272 chr11:016413272 0 W/16413272-16413272 FN3824-S SNP G -> A AC=1;AN=188;BQB=0.947167;DP=2502;DP4=1237,1159,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.57242e-12;MQSB=0.992223;RPB=0.496806;SGB=57.4238;VDB=0.432089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.11:16417094 chr11:016417094 0 W/16417094-16417094 FN2658-S SNP G -> T AC=1;AN=200;BQB=0.994078;DP=4769;DP4=2551,1927,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01758e-14;MQSB=0.964379;RPB=0.971812;SGB=100.316;VDB=0.813123;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.11:16423491 chr11:016423491 0 W/16423491-16423491 FN4160-S SNP G -> T AC=1;AN=170;BQB=0.934074;DP=2329;DP4=1116,1156,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.34388e-06;MQSB=0.784362;RPB=0.666952;SGB=12.556;VDB=0.098185;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.11:16432706 chr11:016432706 0 W/16432706-16432706 FN1682-S SNP G -> T AC=1;AN=188;BQB=0.0128124;DP=3991;DP4=1753,2204,5,21;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.144826;MQB=0.893578;MQSB=0;RPB=0.305933;SGB=-40.1048;VDB=0.769031;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.11:16434662 chr11:016434662 0 W/16434662-16434662 FN944-S Single Base Substitution A-T INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2442.SNP.11:16439442 chr11:016439442 0 W/16439442-16439442 FN2442 SNP C -> G AC=2;AN=200;BQB=0.730639;DP=4661;DP4=2155,2164,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.29582e-21;MQSB=0.71864;RPB=0.300397;SGB=169.394;VDB=0.180347;EFF=INTRON(MODIFIER||||822|LOC_Os11g28530|protein_coding|CODING|LOC_Os11g28530.1|9|1),INTRON(MODIFIER||||822|LOC_Os11g28530|protein_coding|CODING|LOC_Os11g28530.2|9|1),INTRON(MODIFIER||||820|LOC_Os11g28530|protein_coding|CODING|LOC_Os11g28530.3|8|1) W385-6-8-4.SNP.11:16440164 chr11:016440164 0 W/16440164-16440164 W385-6-8-4 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3295-S.SNP.11:16442791 chr11:016442791 0 W/16442791-16442791 FN3295-S SNP C -> T AC=1;AN=184;BQB=0.889532;DP=2855;DP4=1262,1498,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.14655e-07;MQSB=0.423903;RPB=0.104498;SGB=53.2642;VDB=0.24143;EFF=INTRON(MODIFIER||||822|LOC_Os11g28530|protein_coding|CODING|LOC_Os11g28530.2|1|1),INTRON(MODIFIER||||822|LOC_Os11g28530|protein_coding|CODING|LOC_Os11g28530.1|1|1) FN2460.SNP.11:16449377 chr11:016449377 0 W/16449377-16449377 FN2460 SNP C -> T AC=1;AN=200;BQB=0.0454152;DP=4341;DP4=1894,2165,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.75716e-06;MQSB=0.812956;RPB=0.230742;SGB=6.27959;VDB=0.377306;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.11:16450642 chr11:016450642 0 W/16450642-16450642 FN1356-S Single Base Substitution C-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN2602-S.SNP.11:16452034 chr11:016452034 0 W/16452034-16452034 FN2602-S SNP C -> A AC=1;AN=198;BQB=0.438216;DP=4205;DP4=1932,2071,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.23734e-09;MQSB=0.992062;RPB=0.056334;SGB=24.1541;VDB=0.412108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.11:16452035 chr11:016452035 0 W/16452035-16452035 FN2602-S SNP G -> T AC=1;AN=198;BQB=0.153158;DP=4218;DP4=1936,2097,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.28519e-09;MQSB=0.999985;RPB=0.278259;SGB=43.7442;VDB=0.619182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.11:16454685 chr11:016454685 0 W/16454685-16454685 FN3652-S SNP C -> A AC=2;AN=190;BQB=0.948754;DP=2617;DP4=1157,1328,9,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.80521e-13;MQSB=0.972952;RPB=0.871121;SGB=90.0802;VDB=0.834431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGc/aTc|S200I|252|LOC_Os11g28540|protein_coding|CODING|LOC_Os11g28540.1|5|1) FN3342-S.SNP.11:16455043 chr11:016455043 0 W/16455043-16455043 FN3342-S SNP C -> T AC=1;AN=184;BQB=0.946747;DP=2818;DP4=1375,1332,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.82942e-06;MQSB=0.961983;RPB=0.935668;SGB=35.1773;VDB=0.439579;EFF=INTRON(MODIFIER||||252|LOC_Os11g28540|protein_coding|CODING|LOC_Os11g28540.1|3|1) FN3844-S.SNP.11:16456444 chr11:016456444 0 W/16456444-16456444 FN3844-S SNP A -> T AC=1;AN=188;BQB=0.94115;DP=3021;DP4=1500,1397,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.78084e-10;MQSB=0.904654;RPB=0.35006;SGB=46.7622;VDB=0.620972;EFF=INTRON(MODIFIER||||252|LOC_Os11g28540|protein_coding|CODING|LOC_Os11g28540.1|1|1) FN2089-S.SNP.11:16462423 chr11:016462423 0 W/16462423-16462423 FN2089-S SNP T -> C AC=1;AN=168;BQB=0.000274398;DP=3695;DP4=1926,1704,18,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.71174e-05;MQSB=0.999747;RPB=0.908525;SGB=-302.888;VDB=0.514298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1535-S.SNP.11:16463578 chr11:016463578 0 W/16463578-16463578 FN1535-S Single Base Substitution C-T INTERGENIC Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN2217-S.SNP.11:16463578 chr11:016463578 0 W/16463578-16463578 FN2217-S SNP C -> T AC=2;AN=188;BQB=0.965797;DP=4910;DP4=2660,1965,16,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.36407e-18;MQSB=0.755701;RPB=0.999813;SGB=25.8654;VDB=0.399446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-162.SNP.11:16464038 chr11:016464038 0 W/16464038-16464038 FN-162 Single Base Substitution T-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2187-S.SNP.11:16466071 chr11:016466071 0 W/16466071-16466071 FN2187-S SNP C -> A AC=2;AN=190;BQB=0.880707;DP=4830;DP4=2244,2205,15,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00144928;MQB=5.51598e-20;MQSB=0.957086;RPB=0.257721;SGB=72.1834;VDB=0.49863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.11:16466299 chr11:016466299 0 W/16466299-16466299 FN1217-S Single Base Substitution G-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1541-S.SNP.11:16467384 chr11:016467384 0 W/16467384-16467384 FN1541-S Single Base Substitution G-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN4247-S.SNP.11:16468975 chr11:016468975 0 W/16468975-16468975 FN4247-S SNP G -> T AC=1;AN=170;BQB=0.753107;DP=2285;DP4=1181,1019,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.98781e-06;MQSB=0.987193;RPB=0.763617;SGB=61.2001;VDB=0.427042;EFF=INTRON(MODIFIER||||546|LOC_Os11g28550|protein_coding|CODING|LOC_Os11g28550.1|4|1) FN2496.SNP.11:16471465 chr11:016471465 0 W/16471465-16471465 FN2496 SNP G -> C AC=1;AN=200;BQB=0.393303;DP=4410;DP4=2206,1987,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.19964e-11;MQSB=0.910266;RPB=0.626464;SGB=87.1368;VDB=0.296871;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.11:16474299 chr11:016474299 0 W/16474299-16474299 FN551-S Single Base Substitution G-T INTRON HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN1552-S.SNP.11:16475070 chr11:016475070 0 W/16475070-16475070 FN1552-S SNP A -> G AC=2;AN=188;BQB=0.504865;DP=2511;DP4=1142,1319,12,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.26046e-12;MQSB=0.970008;RPB=0.046627;SGB=-42.845;VDB=0.0800432;EFF=INTRON(MODIFIER||||611|LOC_Os11g28560|protein_coding|CODING|LOC_Os11g28560.1|4|1) FN3718-S.SNP.11:16475224 chr11:016475224 0 W/16475224-16475224 FN3718-S SNP G -> A AC=2;AN=190;BQB=0.908521;DP=3050;DP4=1450,1490,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.06721e-08;MQSB=0.976517;RPB=0.848495;SGB=71.8647;VDB=0.754011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R453K|611|LOC_Os11g28560|protein_coding|CODING|LOC_Os11g28560.1|5|1) FN1504-S.SNP.11:16476863 chr11:016476863 0 W/16476863-16476863 FN1504-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN902-S.SNP.11:16485837 chr11:016485837 0 W/16485837-16485837 FN902-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g28590 retrotransposon protein, putative, Ty1-copia subclass SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN_543-2-6.SNP.11:16486567 chr11:016486567 0 W/16486567-16486567 FN_543-2-6 Single Base Substitution C-T Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN3388-S.SNP.11:16486652 chr11:016486652 0 W/16486652-16486652 FN3388-S SNP G -> A AC=1;AN=184;BQB=0.91566;DP=2841;DP4=1209,1469,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.49741e-10;MQSB=0.616401;RPB=0.980461;SGB=35.884;VDB=0.19611;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.11:16492183 chr11:016492183 0 W/16492183-16492183 FN3681-S SNP A -> G AC=1;AN=190;BQB=0.855308;DP=2847;DP4=1397,1341,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.90341e-10;MQSB=0.999863;RPB=0.336818;SGB=50.3161;VDB=0.86224;EFF=INTERGENIC(MODIFIER||||||||||1) FN-122.SNP.11:16492728 chr11:016492728 0 W/16492728-16492728 FN-122 Single Base Substitution T-C INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN4202-S.SNP.11:16493460 chr11:016493460 0 W/16493460-16493460 FN4202-S SNP G -> A AC=1;AN=170;BQB=0.919002;DP=2344;DP4=1150,1129,6,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.66485e-12;MQSB=0.996949;RPB=0.593939;SGB=74.528;VDB=0.32086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.11:16493950 chr11:016493950 0 W/16493950-16493950 FN2687-S SNP C -> A AC=1;AN=200;BQB=0.50242;DP=4291;DP4=2105,1943,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97622e-13;MQSB=0.998394;RPB=0.695681;SGB=86.5007;VDB=0.733112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.11:16493951 chr11:016493951 0 W/16493951-16493951 FN2687-S SNP G -> A AC=1;AN=200;BQB=0.97535;DP=4292;DP4=2009,1964,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.21168e-14;MQSB=0.973607;RPB=0.74336;SGB=91.1059;VDB=0.84893;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.11:16494488 chr11:016494488 0 W/16494488-16494488 FN3357-S SNP C -> T AC=2;AN=184;BQB=0.983869;DP=2780;DP4=1503,1127,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.26252e-17;MQSB=0.981966;RPB=0.581242;SGB=88.5747;VDB=0.821859;EFF=INTERGENIC(MODIFIER||||||||||1) FN1096-S.SNP.11:16497385 chr11:016497385 0 W/16497385-16497385 FN1096-S Single Base Substitution A-T INTERGENIC HOMO SNo: 973, Mutant_ID: FN1096-S, Generation: M2, Mutations: 46, Genes: 33, Seed availability: Yes. FN2092-S.SNP.11:16500140 chr11:016500140 0 W/16500140-16500140 FN2092-S SNP A -> C AC=1;AN=168;BQB=0.166846;DP=2520;DP4=1249,1234,10,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.95027e-05;MQSB=0.88012;RPB=0.996798;SGB=-37.7974;VDB=0.949792;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.11:16502732 chr11:016502732 0 W/16502732-16502732 FN-247 Single Base Substitution A-G INTERGENIC HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN4247-S.SNP.11:16504488 chr11:016504488 0 W/16504488-16504488 FN4247-S SNP C -> T AC=2;AN=170;BQB=0.740377;DP=2297;DP4=1210,924,13,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.06793e-07;MQSB=0.800788;RPB=0.98127;SGB=29.6545;VDB=0.691215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.11:16513997 chr11:016513997 0 W/16513997-16513997 FN1196-S Single Base Substitution C-G INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1758-S.SNP.11:16514404 chr11:016514404 0 W/16514404-16514404 FN1758-S SNP A -> G AC=1;AN=188;BQB=0.811649;DP=3429;DP4=1930,1453,15,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29327e-11;MQSB=0.948496;RPB=0.916277;SGB=98.9552;VDB=0.90518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.11:16516210 chr11:016516210 0 W/16516210-16516210 FN2457 SNP C -> T AC=1;AN=200;BQB=0.523357;DP=2932;DP4=1730,966,12,2;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.000648389;MQSB=0.00318159;RPB=0.972978;SGB=-15.5309;VDB=0.252077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.11:16521096 chr11:016521096 0 W/16521096-16521096 FN2612-S SNP G -> A AC=2;AN=198;BQB=0.752687;DP=4424;DP4=1955,2079,30,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.78729e-25;MQSB=0.9439;RPB=0.958068;SGB=52.4176;VDB=0.96347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.11:16521115 chr11:016521115 0 W/16521115-16521115 FN2139-S SNP G -> T AC=1;AN=168;BQB=0.33609;DP=3698;DP4=1828,1830,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000270416;MQB=2.48443e-06;MQSB=0.981161;RPB=0.955943;SGB=-90.3546;VDB=0.153135;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.11:16527186 chr11:016527186 0 W/16527186-16527186 FN2423 SNP A -> T AC=1;AN=200;BQB=0.978804;DP=4467;DP4=2296,1835,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000223864;MQB=1.85909e-09;MQSB=0.0594352;RPB=0.704234;SGB=7.88476;VDB=0.18357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.11:16531075 chr11:016531075 0 W/16531075-16531075 FN4066-S SNP G -> A AC=1;AN=168;BQB=0.446964;DP=2652;DP4=1347,1186,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.73559e-05;MQSB=0.980358;RPB=0.151642;SGB=-2.96336;VDB=0.363216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.11:16552809 chr11:016552809 0 W/16552809-16552809 FN2734-S SNP G -> T AC=2;AN=200;BQB=0.940497;DP=5090;DP4=2271,2514,26,31;HOB=0.0198;ICB=0.495051;MQ=12;MQ0F=0.45501;MQB=0.0601525;MQSB=0;RPB=0.992382;SGB=72.0916;VDB=0.997579;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.11:16556981 chr11:016556981 0 W/16556981-16556981 FN881-S Single Base Substitution T-A INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN2229-S.SNP.11:16558318 chr11:016558318 0 W/16558318-16558318 FN2229-S SNP G -> A AC=1;AN=190;BQB=0.998076;DP=4511;DP4=2112,2116,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022168;MQB=8.04904e-09;MQSB=0.703945;RPB=0.702851;SGB=28.7675;VDB=0.496398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R51C|127|LOC_Os11g28640|protein_coding|CODING|LOC_Os11g28640.1|1|1) FN1527-S.SNP.11:16559318 chr11:016559318 0 W/16559318-16559318 FN1527-S Single Base Substitution C-A INTERGENIC Homo SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3679-S.SNP.11:16561518 chr11:016561518 0 W/16561518-16561518 FN3679-S SNP G -> C AC=2;AN=190;BQB=0.934744;DP=3088;DP4=1563,1395,21,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.91823e-22;MQSB=0.993783;RPB=0.839323;SGB=82.3989;VDB=0.491426;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.11:16563605 chr11:016563605 0 W/16563605-16563605 FN3782-S SNP T -> C AC=1;AN=190;BQB=0.959432;DP=2991;DP4=1519,1349,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.39614e-11;MQSB=0.940552;RPB=0.204021;SGB=50.3161;VDB=0.908107;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.11:16565960 chr11:016565960 0 W/16565960-16565960 FN4166-S SNP G -> T AC=1;AN=170;BQB=0.957175;DP=2274;DP4=1254,934,10,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.12935e-07;MQSB=0.907022;RPB=0.750366;SGB=43.4296;VDB=0.628403;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.11:16579358 chr11:016579358 0 W/16579358-16579358 FN3709-S SNP C -> G AC=1;AN=190;BQB=0.989859;DP=2664;DP4=1440,1099,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03732e-10;MQSB=0.655432;RPB=0.727138;SGB=50.3161;VDB=0.431111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.11:16584427 chr11:016584427 0 W/16584427-16584427 FN1112-S Single Base Substitution T-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN1420-S.SNP.11:16585888 chr11:016585888 0 W/16585888-16585888 FN1420-S Single Base Substitution C-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3412-S.SNP.11:16586628 chr11:016586628 0 W/16586628-16586628 FN3412-S SNP A -> C AC=1;AN=184;BQB=0.702467;DP=2800;DP4=1373,1327,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48244e-11;MQSB=0.999399;RPB=0.892611;SGB=67.4439;VDB=0.284248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1106-S.SNP.11:16590681 chr11:016590681 0 W/16590681-16590681 FN1106-S Single Base Substitution T-A INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1106-S.SNP.11:16591884 chr11:016591884 0 W/16591884-16591884 FN1106-S Single Base Substitution G-A INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN2412.SNP.11:16593829 chr11:016593829 0 W/16593829-16593829 FN2412 SNP C -> T AC=1;AN=200;BQB=0.883548;DP=6642;DP4=3503,2692,15,5;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0352304;MQB=0.511834;MQSB=4.28301e-06;RPB=0.477013;SGB=12.7003;VDB=0.824688;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1625Q|1912|LOC_Os11g28700|protein_coding|CODING|LOC_Os11g28700.1|2|1) FN1239-S.SNP.11:16607638 chr11:016607638 0 W/16607638-16607638 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN1407-S.SNP.11:16611014 chr11:016611014 0 W/16611014-16611014 FN1407-S Single Base Substitution G-A INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN2609-S.SNP.11:16611489 chr11:016611489 0 W/16611489-16611489 FN2609-S SNP A -> T AC=1;AN=198;BQB=0.350667;DP=4189;DP4=1953,2059,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00310337;MQB=7.49988e-11;MQSB=0.0393192;RPB=0.15047;SGB=79.6954;VDB=0.460958;EFF=INTERGENIC(MODIFIER||||||||||1) FN466-S.SNP.11:16612988 chr11:016612988 0 W/16612988-16612988 FN466-S Single Base Substitution C-T INTRON HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN2218-S.SNP.11:16615087 chr11:016615087 0 W/16615087-16615087 FN2218-S SNP A -> G AC=2;AN=190;BQB=0.621363;DP=5222;DP4=2367,2412,22,13;HOB=0.020831;ICB=0.494793;MQ=25;MQ0F=0.183455;MQB=0.991252;MQSB=0;RPB=0.951345;SGB=74.7373;VDB=0.26561;EFF=INTERGENIC(MODIFIER||||||||||1) FN-37.SNP.11:16617092 chr11:016617092 0 W/16617092-16617092 FN-37 Single Base Substitution C-G INTRON Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN3437-S.SNP.11:16617092 chr11:016617092 0 W/16617092-16617092 FN3437-S SNP C -> G AC=2;AN=184;BQB=0.987549;DP=3173;DP4=1571,1490,20,10;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.00535771;MQB=1.31474e-09;MQSB=0.0197914;RPB=0.731089;SGB=61.1019;VDB=0.431879;EFF=INTRON(MODIFIER||||1761|LOC_Os11g28730|protein_coding|CODING|LOC_Os11g28730.1|2|1) FN762-S.SNP.11:16617092 chr11:016617092 0 W/16617092-16617092 FN762-S Single Base Substitution C-G INTRON HOMO SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1537-S.SNP.11:16620160 chr11:016620160 0 W/16620160-16620160 FN1537-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g28730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1537-S.SNP.11:16620161 chr11:016620161 0 W/16620161-16620161 FN1537-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g28730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3369-S.SNP.11:16625921 chr11:016625921 0 W/16625921-16625921 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.972011;DP=3487;DP4=2135,1237,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00200746;MQB=6.15807e-06;MQSB=5.16659e-06;RPB=0.559387;SGB=33.3622;VDB=0.703347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.11:16626412 chr11:016626412 0 W/16626412-16626412 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.765246;DP=3739;DP4=1564,2096,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00802354;MQB=0.692644;MQSB=5.93196e-05;RPB=0.929496;SGB=53.2642;VDB=0.139941;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.11:16627096 chr11:016627096 0 W/16627096-16627096 FN1048-S Single Base Substitution C-T INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN882-S.SNP.11:16631583 chr11:016631583 0 W/16631583-16631583 FN882-S Single Base Substitution A-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2305.SNP.11:16635584 chr11:016635584 0 W/16635584-16635584 FN2305 SNP G -> A AC=1;AN=192;BQB=0.988968;DP=5095;DP4=2604,2224,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00745829;MQB=0.00150048;MQSB=0.242542;RPB=0.935211;SGB=90.2896;VDB=0.088356;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.11:16636570 chr11:016636570 0 W/16636570-16636570 FN2690-S SNP T -> C AC=1;AN=200;BQB=0.901718;DP=4949;DP4=2463,2281,11,9;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.013336;MQB=0.0023487;MQSB=1.00283e-16;RPB=0.996857;SGB=61.9006;VDB=0.630984;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.11:16638853 chr11:016638853 0 W/16638853-16638853 FN-353 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2333.SNP.11:16644120 chr11:016644120 0 W/16644120-16644120 FN2333 SNP G -> T AC=1;AN=192;BQB=0.0834523;DP=5014;DP4=1932,2704,13,23;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.89072e-14;MQSB=0.411922;RPB=0.49526;SGB=-84.6;VDB=0.30422;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.11:16644420 chr11:016644420 0 W/16644420-16644420 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.902458;DP=3041;DP4=1522,1421,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.06041e-11;MQSB=0.94172;RPB=0.887427;SGB=60.4004;VDB=0.495656;EFF=INTERGENIC(MODIFIER||||||||||1) FN-88.SNP.11:16650453 chr11:016650453 0 W/16650453-16650453 FN-88 Single Base Substitution G-T INTRON HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN-88.SNP.11:16650454 chr11:016650454 0 W/16650454-16650454 FN-88 Single Base Substitution G-T INTRON HET SNo: 88, Mutant_ID: FN-88, Generation: M2, Mutations: 45, Genes: 38, Seed availability: Yes. FN574-S.SNP.11:16651876 chr11:016651876 0 W/16651876-16651876 FN574-S Single Base Substitution A-G INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN-122.SNP.11:16661183 chr11:016661183 0 W/16661183-16661183 FN-122 Single Base Substitution G-A INTERGENIC HET SNo: 122, Mutant_ID: FN-122, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3607-S.SNP.11:16663719 chr11:016663719 0 W/16663719-16663719 FN3607-S SNP C -> A AC=1;AN=190;BQB=0.803243;DP=2708;DP4=1362,1237,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.22077e-05;MQSB=0.8425;RPB=0.763554;SGB=44.5415;VDB=0.140184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2739-S.SNP.11:16664026 chr11:016664026 0 W/16664026-16664026 FN2739-S SNP T -> A AC=1;AN=200;BQB=0.830974;DP=5158;DP4=2392,2560,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.42678e-12;MQSB=0.985793;RPB=0.994378;SGB=81.8956;VDB=0.597371;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.11:16666382 chr11:016666382 0 W/16666382-16666382 FN2322 SNP G -> A AC=2;AN=192;BQB=0.999381;DP=5759;DP4=2707,2574,20,25;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=2.69212e-18;MQSB=0.917782;RPB=0.848783;SGB=-47.9617;VDB=0.680306;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.11:16666643 chr11:016666643 0 W/16666643-16666643 FN439-S Single Base Substitution G-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-68.SNP.11:16667185 chr11:016667185 0 W/16667185-16667185 FN-68 Single Base Substitution T-A INTERGENIC HET SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1728-S.SNP.11:16678229 chr11:016678229 0 W/16678229-16678229 FN1728-S SNP G -> T AC=1;AN=188;BQB=0.690123;DP=1985;DP4=853,1080,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0236776;MQB=0.0257061;MQSB=0.000119376;RPB=0.705815;SGB=35.3493;VDB=0.112589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1728-S.SNP.11:16678230 chr11:016678230 0 W/16678230-16678230 FN1728-S SNP C -> T AC=1;AN=188;BQB=0.676622;DP=1979;DP4=858,1075,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0272865;MQB=0.0316796;MQSB=2.60961e-05;RPB=0.63194;SGB=35.3493;VDB=0.116373;EFF=INTERGENIC(MODIFIER||||||||||1) FN1634-S.SNP.11:16678289 chr11:016678289 0 W/16678289-16678289 FN1634-S Single Base Substitution C-T INTERGENIC HET SNo: 1341, Mutant_ID: FN1634-S, Generation: M2, Mutations: 123, Genes: 64, Seed availability: Yes. FN1047-S.SNP.11:16679323 chr11:016679323 0 W/16679323-16679323 FN1047-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g28780 retrotransposon protein, putative, unclassified, expressed SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1277-S.SNP.11:16680939 chr11:016680939 0 W/16680939-16680939 FN1277-S Single Base Substitution C-T INTRON HOMO SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN2329.SNP.11:16683443 chr11:016683443 0 W/16683443-16683443 FN2329 SNP G -> T AC=1;AN=192;BQB=0.972259;DP=4417;DP4=2316,1812,13,9;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0219606;MQB=0.000416729;MQSB=1.07401e-31;RPB=0.988925;SGB=-11.3826;VDB=0.121738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.11:16683445 chr11:016683445 0 W/16683445-16683445 FN2329 SNP G -> T AC=1;AN=192;BQB=0.341865;DP=4427;DP4=2336,1801,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0210075;MQB=0.000337229;MQSB=7.80948e-30;RPB=0.892272;SGB=36.607;VDB=0.119165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2209-S.SNP.11:16689640 chr11:016689640 0 W/16689640-16689640 FN2209-S SNP G -> A AC=1;AN=190;BQB=0.706238;DP=5055;DP4=2448,2308,6,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7047e-09;MQSB=0.632015;RPB=0.599763;SGB=38.983;VDB=0.828622;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D670N|729|LOC_Os11g28790|protein_coding|CODING|LOC_Os11g28790.1|7|1) FN882-S.SNP.11:16689640 chr11:016689640 0 W/16689640-16689640 FN882-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g28790 retrotransposon protein, putative, unclassified, expressed SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2092-S.SNP.11:16693077 chr11:016693077 0 W/16693077-16693077 FN2092-S SNP G -> A AC=1;AN=168;BQB=0.745798;DP=3061;DP4=1503,1492,17,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27317e-13;MQSB=0.624979;RPB=0.801711;SGB=-8.04863;VDB=0.0848011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P164S|619|LOC_Os11g28810|protein_coding|CODING|LOC_Os11g28810.1|2|1) FN-157.SNP.11:16694098 chr11:016694098 0 W/16694098-16694098 FN-157 Single Base Substitution G-T INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN871-S.SNP.11:16695080 chr11:016695080 0 W/16695080-16695080 FN871-S Single Base Substitution G-A INTERGENIC HET SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2411.SNP.11:16696442 chr11:016696442 0 W/16696442-16696442 FN2411 SNP C -> T AC=2;AN=200;BQB=0.0556893;DP=4224;DP4=2032,1937,22,32;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000236742;MQB=1.48386e-18;MQSB=0.0276571;RPB=0.853828;SGB=184.476;VDB=0.790194;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.11:16698404 chr11:016698404 0 W/16698404-16698404 FN2422 SNP A -> G AC=1;AN=200;BQB=0.830724;DP=4437;DP4=2018,2057,12,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00270453;MQB=0.000101576;MQSB=0.999814;RPB=0.276677;SGB=58.2954;VDB=0.259503;EFF=INTRON(MODIFIER||||150|LOC_Os11g28830|protein_coding|CODING|LOC_Os11g28830.1|1|1) FN754-S.SNP.11:16707623 chr11:016707623 0 W/16707623-16707623 FN754-S Single Base Substitution C-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3421-S.SNP.11:16707772 chr11:016707772 0 W/16707772-16707772 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.722299;DP=2907;DP4=1321,1490,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.76714e-06;MQSB=0.931284;RPB=0.71602;SGB=44.2207;VDB=0.478779;EFF=INTERGENIC(MODIFIER||||||||||1) W450-6-1.SNP.11:16712651 chr11:016712651 0 W/16712651-16712651 W450-6-1 Single Base Substitution G-A INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3331-S.SNP.11:16712827 chr11:016712827 0 W/16712827-16712827 FN3331-S SNP C -> A AC=1;AN=184;BQB=0.278775;DP=3793;DP4=1827,1868,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.40864e-11;MQSB=0.922124;RPB=0.897953;SGB=49.835;VDB=0.627798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3331-S.SNP.11:16712828 chr11:016712828 0 W/16712828-16712828 FN3331-S SNP C -> T AC=1;AN=184;BQB=0.962257;DP=3787;DP4=1806,1855,14,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.96971e-11;MQSB=0.920222;RPB=0.992147;SGB=8.32411;VDB=0.549845;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.11:16713043 chr11:016713043 0 W/16713043-16713043 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.99049;DP=2826;DP4=1493,1293,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.24602e-10;MQSB=0.973366;RPB=0.19786;SGB=11.3448;VDB=0.650014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.11:16713140 chr11:016713140 0 W/16713140-16713140 FN1114-S Single Base Substitution C-G INTERGENIC HOMO SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN1485-S.SNP.11:16715491 chr11:016715491 0 W/16715491-16715491 FN1485-S Single Base Substitution G-A INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN1175-S.SNP.11:16716145 chr11:016716145 0 W/16716145-16716145 FN1175-S Single Base Substitution C-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2175-S.SNP.11:16720335 chr11:016720335 0 W/16720335-16720335 FN2175-S SNP A -> G AC=1;AN=168;BQB=0.400123;DP=3094;DP4=1384,1675,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.37361e-07;MQSB=0.790469;RPB=0.589344;SGB=58.7637;VDB=0.796491;EFF=INTERGENIC(MODIFIER||||||||||1) FN3938-S.SNP.11:16723574 chr11:016723574 0 W/16723574-16723574 FN3938-S SNP C -> A AC=1;AN=158;BQB=0.906781;DP=2598;DP4=1208,1286,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=33;MQ0F=0.0812163;MQB=0.963296;MQSB=0.60415;RPB=0.932911;SGB=60.1755;VDB=0.127789;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.11:16732253 chr11:016732253 0 W/16732253-16732253 FN4141-S SNP A -> T AC=1;AN=170;BQB=0.955216;DP=2658;DP4=1236,1364,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.07672e-05;MQSB=0.977953;RPB=0.999987;SGB=38.987;VDB=0.619026;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q262L|713|LOC_Os11g28910|protein_coding|CODING|LOC_Os11g28910.1|3|1) FN1333-S.SNP.11:16744826 chr11:016744826 0 W/16744826-16744826 FN1333-S Single Base Substitution G-A INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1040-S.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN1040-S Single Base Substitution G-A INTERGENIC HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1693-S.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN1693-S SNP G -> A AC=2;AN=188;BQB=0.924669;DP=2068;DP4=1161,842,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.40095e-09;MQSB=0.984526;RPB=0.858889;SGB=53.7007;VDB=0.470042;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN2485 SNP G -> A AC=2;AN=200;BQB=0.957031;DP=4352;DP4=2092,1952,14,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.93363e-18;MQSB=0.135671;RPB=0.855997;SGB=115.978;VDB=0.361287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN2656-S SNP G -> A AC=2;AN=200;BQB=0.561383;DP=4674;DP4=2153,2177,31,37;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.81331e-39;MQSB=0.736263;RPB=0.944281;SGB=301.952;VDB=0.526053;EFF=INTERGENIC(MODIFIER||||||||||1) FN3429-S.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.897305;DP=3134;DP4=1479,1554,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66033e-06;MQSB=0.980293;RPB=0.484437;SGB=35.7479;VDB=0.574591;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.11:16749525 chr11:016749525 0 W/16749525-16749525 FN378-S Single Base Substitution G-A INTERGENIC HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. W472-5-1.SNP.11:16753759 chr11:016753759 0 W/16753759-16753759 W472-5-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g28950 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN4185-S.SNP.11:16754148 chr11:016754148 0 W/16754148-16754148 FN4185-S SNP T -> A AC=1;AN=170;BQB=0.856601;DP=2487;DP4=1164,1237,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.10571e-09;MQSB=0.89692;RPB=0.93985;SGB=4.33246;VDB=0.404255;EFF=INTRON(MODIFIER||||1070|LOC_Os11g28950|protein_coding|CODING|LOC_Os11g28950.1|4|1) FN-162.SNP.11:16762423 chr11:016762423 0 W/16762423-16762423 FN-162 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g28970 retrotransposon protein, putative, unclassified SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2475.SNP.11:16763049 chr11:016763049 0 W/16763049-16763049 FN2475 SNP A -> C AC=1;AN=200;BQB=0.41096;DP=4945;DP4=2411,2230,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.16226e-11;MQSB=0.955675;RPB=0.226442;SGB=51.0851;VDB=0.468417;EFF=INTRON(MODIFIER||||408|LOC_Os11g28970|protein_coding|CODING|LOC_Os11g28970.1|2|1) FN1357-S.SNP.11:16789960 chr11:016789960 0 W/16789960-16789960 FN1357-S Single Base Substitution T-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1333-S.SNP.11:16791344 chr11:016791344 0 W/16791344-16791344 FN1333-S Single Base Substitution A-G INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN2204-S.SNP.11:16791493 chr11:016791493 0 W/16791493-16791493 FN2204-S SNP A -> C AC=1;AN=190;BQB=0.758941;DP=5132;DP4=2342,2364,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.4202e-15;MQSB=0.99848;RPB=0.971119;SGB=108.296;VDB=0.543568;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.11:16793691 chr11:016793691 0 W/16793691-16793691 FN2456 SNP G -> A AC=1;AN=200;BQB=0.770488;DP=4520;DP4=2301,1960,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12717e-06;MQSB=0.882642;RPB=0.996837;SGB=40.4492;VDB=0.543076;EFF=INTRON(MODIFIER||||774|LOC_Os11g29014|protein_coding|CODING|LOC_Os11g29014.1|3|1) FN3382-S.SNP.11:16794205 chr11:016794205 0 W/16794205-16794205 FN3382-S SNP G -> A AC=1;AN=184;BQB=0.999252;DP=2966;DP4=1323,1557,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.9477e-11;MQSB=0.995514;RPB=0.72037;SGB=71.3514;VDB=0.424026;EFF=INTRON(MODIFIER||||774|LOC_Os11g29014|protein_coding|CODING|LOC_Os11g29014.1|2|1) FN1561-S.SNP.11:16798793 chr11:016798793 0 W/16798793-16798793 FN1561-S Single Base Substitution A-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. W464-2-1.SNP.11:16810800 chr11:016810800 0 W/16810800-16810800 W464-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN783-S.SNP.11:16814000 chr11:016814000 0 W/16814000-16814000 FN783-S Single Base Substitution T-C INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN438-S.SNP.11:16814499 chr11:016814499 0 W/16814499-16814499 FN438-S Single Base Substitution G-A INTERGENIC HET SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN2495.SNP.11:16815447 chr11:016815447 0 W/16815447-16815447 FN2495 SNP T -> C AC=2;AN=200;BQB=0.386944;DP=4243;DP4=2060,1714,14,12;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00329955;MQB=1.12665e-08;MQSB=0.0307501;RPB=0.80903;SGB=22.3313;VDB=0.530657;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.11:16817242 chr11:016817242 0 W/16817242-16817242 FN1233-S Single Base Substitution T-C INTERGENIC HET SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN4153-S.SNP.11:16817630 chr11:016817630 0 W/16817630-16817630 FN4153-S SNP C -> T AC=2;AN=170;BQB=0.868217;DP=2365;DP4=1313,971,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.1676e-12;MQSB=0.997961;RPB=0.980179;SGB=87.856;VDB=0.357254;EFF=INTERGENIC(MODIFIER||||||||||1) FN-259.SNP.11:16821229 chr11:016821229 0 W/16821229-16821229 FN-259 Single Base Substitution G-C INTERGENIC HET SNo: 258, Mutant_ID: FN-259, Generation: M2, Mutations: 47, Genes: 681, Seed availability: Yes. FN3366-S.SNP.11:16822468 chr11:016822468 0 W/16822468-16822468 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.263076;DP=2436;DP4=750,1565,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00382133;MQSB=0.26433;RPB=0.969889;SGB=44.2207;VDB=0.608538;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||762|LOC_Os11g29050|protein_coding|CODING|LOC_Os11g29050.1|2|1),INTRON(MODIFIER||||762|LOC_Os11g29050|protein_coding|CODING|LOC_Os11g29050.1|1|1);LOF=(LOC_Os11g29050|LOC_Os11g29050|1|1.00) FN1320-S.SNP.11:16828360 chr11:016828360 0 W/16828360-16828360 FN1320-S Single Base Substitution C-T INTERGENIC HET SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN545-S.SNP.11:16834983 chr11:016834983 0 W/16834983-16834983 FN545-S Single Base Substitution A-C INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN1716-S.SNP.11:16839146 chr11:016839146 0 W/16839146-16839146 FN1716-S SNP T -> G AC=1;AN=188;BQB=0.308579;DP=3344;DP4=1354,1954,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.40825e-10;MQSB=0.757985;RPB=0.690043;SGB=-10.6534;VDB=0.589323;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.11:16839493 chr11:016839493 0 W/16839493-16839493 FN1368-S Single Base Substitution G-A INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2752-S.SNP.11:16839493 chr11:016839493 0 W/16839493-16839493 FN2752-S SNP G -> A AC=2;AN=200;BQB=0.886391;DP=5349;DP4=2236,2847,17,19;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00186951;MQB=1.02875e-17;MQSB=7.33561e-06;RPB=0.127897;SGB=38.383;VDB=0.447572;EFF=INTERGENIC(MODIFIER||||||||||1) FN-103.SNP.11:16840146 chr11:016840146 0 W/16840146-16840146 FN-103 Single Base Substitution T-C INTERGENIC HET SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN1136-S.SNP.11:16842755 chr11:016842755 0 W/16842755-16842755 FN1136-S Single Base Substitution C-T INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN729-S.SNP.11:16843137 chr11:016843137 0 W/16843137-16843137 FN729-S Single Base Substitution C-T INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN4314-S.SNP.11:16844691 chr11:016844691 0 W/16844691-16844691 FN4314-S SNP C -> G AC=1;AN=170;BQB=0.999773;DP=2557;DP4=1254,1199,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00547517;MQB=1.26629e-08;MQSB=0.000111084;RPB=0.386142;SGB=70.0854;VDB=0.0287832;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcG|S321|1132|LOC_Os11g29074|protein_coding|CODING|LOC_Os11g29074.1|6|1) FN4314-S.SNP.11:16844695 chr11:016844695 0 W/16844695-16844695 FN4314-S SNP T -> A AC=1;AN=170;BQB=0.917604;DP=2572;DP4=1257,1231,11,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.00427683;MQB=5.76387e-09;MQSB=0.00046089;RPB=0.227339;SGB=70.0854;VDB=0.0306797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Act|S323T|1132|LOC_Os11g29074|protein_coding|CODING|LOC_Os11g29074.1|6|1) FN2574-S.SNP.11:16848069 chr11:016848069 0 W/16848069-16848069 FN2574-S SNP G -> A AC=1;AN=198;BQB=0.150135;DP=3898;DP4=1910,1808,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000256542;MQB=2.65895e-05;MQSB=0.53016;RPB=0.0370981;SGB=18.5788;VDB=0.0474063;EFF=INTERGENIC(MODIFIER||||||||||1) 703-3.SNP.11:16850788 chr11:016850788 0 W/16850788-16850788 703-3 Single Base Substitution T-A NON_SYNONYMOUS_CODING Homo LOC_Os11g29090 NB-ARC/LRR disease resistance protein, putative, expressed SNo: 1452, Mutant_ID: 703-3, Generation: M2, Mutations: 24, Genes: 38, Seed availability: Yes. FN1222-S.SNP.11:16853855 chr11:016853855 0 W/16853855-16853855 FN1222-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN3347-S.SNP.11:16857683 chr11:016857683 0 W/16857683-16857683 FN3347-S SNP G -> A AC=1;AN=184;BQB=0.998189;DP=2715;DP4=1202,1411,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.45954e-05;MQSB=0.999335;RPB=0.358957;SGB=21.6609;VDB=0.142062;EFF=INTERGENIC(MODIFIER||||||||||1) FN3927-S.SNP.11:16868322 chr11:016868322 0 W/16868322-16868322 FN3927-S SNP A -> G AC=1;AN=158;BQB=0.977056;DP=2108;DP4=948,1035,14,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.14455e-11;MQSB=0.897815;RPB=0.790222;SGB=57.6596;VDB=0.462817;EFF=INTRON(MODIFIER||||529|LOC_Os11g29120|protein_coding|CODING|LOC_Os11g29120.1|6|1),INTRON(MODIFIER||||525|LOC_Os11g29120|protein_coding|CODING|LOC_Os11g29120.2|6|1),INTRON(MODIFIER||||368|LOC_Os11g29120|protein_coding|CODING|LOC_Os11g29120.3|2|1) FN2120-S.SNP.11:16878657 chr11:016878657 0 W/16878657-16878657 FN2120-S SNP C -> A AC=1;AN=168;BQB=0.876302;DP=3490;DP4=1681,1767,13,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.24754e-12;MQSB=0.956442;RPB=0.1758;SGB=-11.0644;VDB=0.0685986;EFF=INTERGENIC(MODIFIER||||||||||1) FN_955-1.SNP.11:16880125 chr11:016880125 0 W/16880125-16880125 FN_955-1 Single Base Substitution G-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN2116-S.SNP.11:16885490 chr11:016885490 0 W/16885490-16885490 FN2116-S SNP C -> G AC=1;AN=168;BQB=0.32187;DP=2452;DP4=1327,1062,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.87474e-11;MQSB=0.472633;RPB=0.99065;SGB=-13.6493;VDB=0.871267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G158A|164|LOC_Os11g29130|protein_coding|CODING|LOC_Os11g29130.1|3|1) FN1600-S.SNP.11:16893442 chr11:016893442 0 W/16893442-16893442 FN1600-S Single Base Substitution C-A INTERGENIC Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN2345.SNP.11:16894455 chr11:016894455 0 W/16894455-16894455 FN2345 SNP A -> G AC=2;AN=192;BQB=0.800371;DP=4489;DP4=2044,2070,21,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.68144e-26;MQSB=0.922211;RPB=0.757997;SGB=57.4139;VDB=0.81861;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.11:16901125 chr11:016901125 0 W/16901125-16901125 FN4130-S SNP C -> A AC=2;AN=182;BQB=0.728029;DP=2581;DP4=1313,1194,10,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.2932e-07;MQSB=0.902708;RPB=0.989744;SGB=71.1765;VDB=0.872981;EFF=INTERGENIC(MODIFIER||||||||||1) FN-403.SNP.11:16901936 chr11:016901936 0 W/16901936-16901936 FN-403 Single Base Substitution C-T INTERGENIC HET SNo: 392, Mutant_ID: FN-403, Generation: M2, Mutations: 34, Genes: 102, Seed availability: Yes. FN403-S.SNP.11:16901936 chr11:016901936 0 W/16901936-16901936 FN403-S Single Base Substitution C-T INTERGENIC HOMO SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN-52.SNP.11:16907724 chr11:016907724 0 W/16907724-16907724 FN-52 Single Base Substitution A-C INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN3557-S.SNP.11:16914543 chr11:016914543 0 W/16914543-16914543 FN3557-S SNP A -> T AC=1;AN=188;BQB=0.934776;DP=2816;DP4=1377,1290,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.95793e-08;MQSB=0.783438;RPB=0.463387;SGB=20.9896;VDB=0.762081;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.11:16915258 chr11:016915258 0 W/16915258-16915258 FN3357-S SNP C -> T AC=2;AN=184;BQB=0.994471;DP=3069;DP4=1433,1528,23,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.25066e-15;MQSB=0.999999;RPB=0.069451;SGB=166.309;VDB=0.292484;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L197F|261|LOC_Os11g29180|protein_coding|CODING|LOC_Os11g29180.1|1|1) FN-59.SNP.11:16916812 chr11:016916812 0 W/16916812-16916812 FN-59 Single Base Substitution A-G INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN-79.SNP.11:16922525 chr11:016922525 0 W/16922525-16922525 FN-79 Single Base Substitution C-T INTERGENIC HET SNo: 79, Mutant_ID: FN-79, Generation: M2, Mutations: 45, Genes: 76, Seed availability: Yes. FN2121-S.SNP.11:16923297 chr11:016923297 0 W/16923297-16923297 FN2121-S SNP C -> T AC=1;AN=168;BQB=0.564493;DP=1949;DP4=729,1159,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.09797e-06;MQSB=0.846997;RPB=0.292266;SGB=14.8923;VDB=0.429681;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.11:16930853 chr11:016930853 0 W/16930853-16930853 FN4344-S SNP T -> A AC=1;AN=170;BQB=0.988595;DP=2675;DP4=1432,1176,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.6114e-08;MQSB=0.968019;RPB=0.00482129;SGB=31.4354;VDB=0.190928;EFF=INTRON(MODIFIER||||803|LOC_Os11g29200|protein_coding|CODING|LOC_Os11g29200.1|7|1) FN1497-S.SNP.11:16936356 chr11:016936356 0 W/16936356-16936356 FN1497-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN473-S.SNP.11:16948034 chr11:016948034 0 W/16948034-16948034 FN473-S Single Base Substitution A-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN1723-S.SNP.11:16948558 chr11:016948558 0 W/16948558-16948558 FN1723-S SNP A -> G AC=1;AN=188;BQB=0.530577;DP=3209;DP4=1692,1480,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21588e-08;MQSB=0.988882;RPB=0.787811;SGB=-38.278;VDB=0.560973;EFF=UTR_3_PRIME(MODIFIER||260||961|LOC_Os11g29240|protein_coding|CODING|LOC_Os11g29240.1|6|1) FN1140-S.SNP.11:16952648 chr11:016952648 0 W/16952648-16952648 FN1140-S Single Base Substitution A-G INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2242-S.SNP.11:16952817 chr11:016952817 0 W/16952817-16952817 FN2242-S SNP G -> T AC=1;AN=190;BQB=0.79125;DP=5030;DP4=2411,2286,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.03826e-11;MQSB=0.981554;RPB=0.39226;SGB=50.3161;VDB=0.0263663;EFF=INTRON(MODIFIER||||961|LOC_Os11g29240|protein_coding|CODING|LOC_Os11g29240.1|2|1) FN-277.SNP.11:16954827 chr11:016954827 0 W/16954827-16954827 FN-277 Single Base Substitution T-C INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3466-S.SNP.11:16959148 chr11:016959148 0 W/16959148-16959148 FN3466-S SNP C -> A AC=1;AN=184;BQB=0.851233;DP=3034;DP4=1779,1166,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.5993e-13;MQSB=0.980529;RPB=0.870559;SGB=70.9657;VDB=0.81689;EFF=INTRON(MODIFIER||||87|LOC_Os11g29250|protein_coding|CODING|LOC_Os11g29250.1|1|1) FN3662-S.SNP.11:16959973 chr11:016959973 0 W/16959973-16959973 FN3662-S SNP A -> T AC=1;AN=190;BQB=0.649488;DP=2991;DP4=1357,1438,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.50951e-06;MQSB=0.516714;RPB=0.404285;SGB=1.00337;VDB=0.197395;EFF=INTERGENIC(MODIFIER||||||||||1) FN797-S.SNP.11:16962645 chr11:016962645 0 W/16962645-16962645 FN797-S Single Base Substitution T-G INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN548-S.SNP.11:16971935 chr11:016971935 0 W/16971935-16971935 FN548-S Single Base Substitution G-A INTRON HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN1363-S.SNP.11:16973509 chr11:016973509 0 W/16973509-16973509 FN1363-S Single Base Substitution G-A INTRON HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN477-S.SNP.11:16976292 chr11:016976292 0 W/16976292-16976292 FN477-S Single Base Substitution C-T INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2639-S.SNP.11:16986184 chr11:016986184 0 W/16986184-16986184 FN2639-S SNP G -> A AC=1;AN=200;BQB=0.999976;DP=4050;DP4=1831,1944,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29637e-10;MQSB=0.954044;RPB=0.951187;SGB=39.9056;VDB=0.225051;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V199I|556|LOC_Os11g29290|protein_coding|CODING|LOC_Os11g29290.1|1|1) FN2555-S.SNP.11:16988529 chr11:016988529 0 W/16988529-16988529 FN2555-S SNP A -> T AC=2;AN=198;BQB=0.838377;DP=3798;DP4=1712,1826,17,18;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.09282e-19;MQSB=0.942884;RPB=0.563004;SGB=155.237;VDB=0.404883;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.11:16988531 chr11:016988531 0 W/16988531-16988531 FN2555-S SNP A -> T AC=2;AN=198;BQB=0.917338;DP=3804;DP4=1676,1814,15,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.74106e-19;MQSB=0.945747;RPB=0.433737;SGB=112.051;VDB=0.475829;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.11:16991443 chr11:016991443 0 W/16991443-16991443 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.998931;DP=2245;DP4=1221,922,11,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.01161e-08;MQSB=0.911543;RPB=0.968847;SGB=34.748;VDB=0.726211;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.11:16993849 chr11:016993849 0 W/16993849-16993849 FN3454-S SNP T -> C AC=1;AN=184;BQB=0.82086;DP=2670;DP4=1111,1408,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000374532;MQB=3.69199e-06;MQSB=0.933376;RPB=0.333326;SGB=-2.32838;VDB=0.569574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2707-S.SNP.11:17003561 chr11:017003561 0 W/17003561-17003561 FN2707-S SNP G -> A AC=1;AN=200;BQB=0.96688;DP=4490;DP4=2185,1965,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222717;MQB=7.93731e-07;MQSB=0.862081;RPB=0.674792;SGB=40.2696;VDB=0.944539;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S333L|680|LOC_Os11g29320|protein_coding|CODING|LOC_Os11g29320.1|2|1) FN1674-S.SNP.11:17006177 chr11:017006177 0 W/17006177-17006177 FN1674-S SNP C -> T AC=1;AN=188;BQB=0.696615;DP=3275;DP4=1574,1660,10,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000305344;MQB=1.06401e-12;MQSB=0.992076;RPB=0.395677;SGB=-10.6534;VDB=0.789092;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.11:17007771 chr11:017007771 0 W/17007771-17007771 FN2771-S SNP G -> T AC=1;AN=198;BQB=0.904972;DP=4200;DP4=2061,1901,14,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.57492e-11;MQSB=0.983422;RPB=0.999953;SGB=58.1246;VDB=0.617127;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.11:17016676 chr11:017016676 0 W/17016676-17016676 FN3637-S SNP A -> C AC=2;AN=190;BQB=0.895225;DP=2994;DP4=1586,1287,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.57786e-14;MQSB=0.871852;RPB=0.932987;SGB=82.301;VDB=0.945562;EFF=INTERGENIC(MODIFIER||||||||||1) FN266-S.SNP.11:17024380 chr11:017024380 0 W/17024380-17024380 FN266-S Single Base Substitution T-G INTERGENIC HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1038-S.SNP.11:17024672 chr11:017024672 0 W/17024672-17024672 FN1038-S Single Base Substitution G-A INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN2169-S.SNP.11:17053607 chr11:017053607 0 W/17053607-17053607 FN2169-S SNP A -> T AC=1;AN=168;BQB=0.00132776;DP=3165;DP4=1620,1513,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000329715;MQSB=0.98146;RPB=0.245576;SGB=-122.928;VDB=0.0719246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.11:17078341 chr11:017078341 0 W/17078341-17078341 FN1421-S Single Base Substitution C-T INTRON HOMO SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1104-S.SNP.11:17089330 chr11:017089330 0 W/17089330-17089330 FN1104-S Single Base Substitution A-C INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN833-S.SNP.11:17089363 chr11:017089363 0 W/17089363-17089363 FN833-S Single Base Substitution T-C INTERGENIC HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN1563-S.SNP.11:17093579 chr11:017093579 0 W/17093579-17093579 FN1563-S Single Base Substitution G-A STOP_GAINED Homo LOC_Os11g29450 retrotransposon protein, putative, unclassified, expressed SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN2473.SNP.11:17093579 chr11:017093579 0 W/17093579-17093579 FN2473 SNP G -> A AC=2;AN=200;BQB=0.966363;DP=4546;DP4=2141,2144,16,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.37558e-16;MQSB=0.68326;RPB=0.741837;SGB=68.5625;VDB=0.955616;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q458*|719|LOC_Os11g29450|protein_coding|CODING|LOC_Os11g29450.1|7|1);LOF=(LOC_Os11g29450|LOC_Os11g29450|1|1.00);NMD=(LOC_Os11g29450|LOC_Os11g29450|1|1.00) FN3332-S.SNP.11:17093579 chr11:017093579 0 W/17093579-17093579 FN3332-S SNP G -> A AC=1;AN=184;BQB=0.991755;DP=3179;DP4=1489,1595,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.99429e-09;MQSB=0.977251;RPB=0.315097;SGB=66.8296;VDB=0.73702;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q458*|719|LOC_Os11g29450|protein_coding|CODING|LOC_Os11g29450.1|7|1);LOF=(LOC_Os11g29450|LOC_Os11g29450|1|1.00);NMD=(LOC_Os11g29450|LOC_Os11g29450|1|1.00) FN3627-S.SNP.11:17093579 chr11:017093579 0 W/17093579-17093579 FN3627-S SNP G -> A AC=2;AN=190;BQB=0.665549;DP=2906;DP4=1368,1420,13,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.30303e-14;MQSB=0.916948;RPB=0.999458;SGB=92.9626;VDB=0.999088;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q458*|719|LOC_Os11g29450|protein_coding|CODING|LOC_Os11g29450.1|7|1);LOF=(LOC_Os11g29450|LOC_Os11g29450|1|1.00);NMD=(LOC_Os11g29450|LOC_Os11g29450|1|1.00) FN1009-S.SNP.11:17095490 chr11:017095490 0 W/17095490-17095490 FN1009-S Single Base Substitution G-T INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN-74.SNP.11:17099217 chr11:017099217 0 W/17099217-17099217 FN-74 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g29470 expressed protein SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1290-S.SNP.11:17100124 chr11:017100124 0 W/17100124-17100124 FN1290-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN1666-S.SNP.11:17100299 chr11:017100299 0 W/17100299-17100299 FN1666-S SNP G -> A AC=2;AN=188;BQB=0.71342;DP=3339;DP4=1983,1294,17,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.16259e-12;MQSB=0.858637;RPB=0.875716;SGB=108.042;VDB=0.306669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.11:17107979 chr11:017107979 0 W/17107979-17107979 FN3316-S SNP T -> A AC=2;AN=184;BQB=0.992866;DP=3344;DP4=1287,1900,16,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.00476e-17;MQSB=0.983172;RPB=0.541983;SGB=102.662;VDB=0.470814;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.11:17117615 chr11:017117615 0 W/17117615-17117615 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.0659854;DP=4741;DP4=2361,2113,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.12914e-05;MQSB=0.91931;RPB=0.561708;SGB=4.11112;VDB=0.582306;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.11:17122568 chr11:017122568 0 W/17122568-17122568 FN2309 SNP T -> C AC=1;AN=192;BQB=0.791575;DP=5417;DP4=2706,2359,10,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.41242e-08;MQSB=0.998863;RPB=0.838856;SGB=2.66176;VDB=0.5863;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.11:17124911 chr11:017124911 0 W/17124911-17124911 FN3628-S SNP T -> C AC=2;AN=190;BQB=0.980065;DP=2629;DP4=1184,1285,12,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15499e-13;MQSB=0.390098;RPB=0.99038;SGB=41.5369;VDB=0.957161;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.11:17125452 chr11:017125452 0 W/17125452-17125452 FN4082-S SNP A -> G AC=2;AN=182;BQB=0.720028;DP=2165;DP4=1268,821,21,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.79148e-18;MQSB=0.998856;RPB=0.635282;SGB=151.539;VDB=0.107987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.11:17126274 chr11:017126274 0 W/17126274-17126274 FN2283 SNP A -> C AC=1;AN=192;BQB=0.194665;DP=5354;DP4=2798,2194,19,22;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.15692e-21;MQSB=0.881769;RPB=0.567836;SGB=181.577;VDB=0.196301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3858-S.SNP.11:17129610 chr11:017129610 0 W/17129610-17129610 FN3858-S SNP T -> C AC=1;AN=158;BQB=0.978974;DP=2468;DP4=1158,1207,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.04532e-09;MQSB=0.999891;RPB=0.803577;SGB=3.4556;VDB=0.565662;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y757C|1452|LOC_Os11g29520|protein_coding|CODING|LOC_Os11g29520.1|3|1) FN745-S.SNP.11:17130203 chr11:017130203 0 W/17130203-17130203 FN745-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN4103-S.SNP.11:17132501 chr11:017132501 0 W/17132501-17132501 FN4103-S SNP G -> T AC=2;AN=182;BQB=0.968166;DP=2995;DP4=1523,1384,6,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.23863e-09;MQSB=0.986709;RPB=0.523671;SGB=62.1548;VDB=0.242021;EFF=INTERGENIC(MODIFIER||||||||||1) FN-182.SNP.11:17135504 chr11:017135504 0 W/17135504-17135504 FN-182 Single Base Substitution G-A INTERGENIC HET SNo: 182, Mutant_ID: FN-182, Generation: M2, Mutations: 55, Genes: 12, Seed availability: Yes. FN531-S.SNP.11:17138345 chr11:017138345 0 W/17138345-17138345 FN531-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g29530 retrotransposon protein, putative, unclassified, expressed SNo: 528, Mutant_ID: FN531-S, Generation: M2, Mutations: 43, Genes: 24, Seed availability: Yes. FN3823-S.SNP.11:17139376 chr11:017139376 0 W/17139376-17139376 FN3823-S SNP C -> T AC=1;AN=190;BQB=0.99942;DP=2973;DP4=1296,1585,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18843e-08;MQSB=0.99981;RPB=0.999794;SGB=62.7569;VDB=0.766839;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P555S|1216|LOC_Os11g29530|protein_coding|CODING|LOC_Os11g29530.1|5|1) FN-382.SNP.11:17139646 chr11:017139646 0 W/17139646-17139646 FN-382 Single Base Substitution G-A INTRON HET SNo: 370, Mutant_ID: FN-382, Generation: M2, Mutations: 44, Genes: 57, Seed availability: Yes. FN1204-S.SNP.11:17139796 chr11:017139796 0 W/17139796-17139796 FN1204-S Single Base Substitution C-A INTRON HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN2239-S.SNP.11:17141996 chr11:017141996 0 W/17141996-17141996 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.508486;DP=5362;DP4=2293,2736,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000186498;MQB=5.72115e-12;MQSB=0.354469;RPB=0.91345;SGB=68.0854;VDB=0.335124;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.11:17142812 chr11:017142812 0 W/17142812-17142812 FN3529-S SNP A -> G AC=1;AN=188;BQB=0.211487;DP=3863;DP4=2205,1463,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.99082e-05;MQSB=0.75697;RPB=0.137192;SGB=0.908323;VDB=0.969062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2438.SNP.11:17143038 chr11:017143038 0 W/17143038-17143038 FN2438 SNP T -> C AC=1;AN=200;BQB=0.685394;DP=4676;DP4=2127,2117,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.32427e-10;MQSB=0.983818;RPB=0.512679;SGB=-37.6845;VDB=0.355925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E285G|304|LOC_Os11g29540|protein_coding|CODING|LOC_Os11g29540.1|3|1) FN3356-S.SNP.11:17154407 chr11:017154407 0 W/17154407-17154407 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.948286;DP=2995;DP4=1346,1550,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.74695e-09;MQSB=0.996941;RPB=0.952727;SGB=57.786;VDB=0.620629;EFF=INTRON(MODIFIER||||1498|LOC_Os11g29570|protein_coding|CODING|LOC_Os11g29570.1|5|1) FN2702-S.SNP.11:17154966 chr11:017154966 0 W/17154966-17154966 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.806836;DP=4881;DP4=2457,2122,3,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0051219;MQB=4.71043e-05;MQSB=0.528567;RPB=0.4464;SGB=22.2439;VDB=0.397591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E1010K|1498|LOC_Os11g29570|protein_coding|CODING|LOC_Os11g29570.1|5|1) FN1261-S.SNP.11:17155589 chr11:017155589 0 W/17155589-17155589 FN1261-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2494.SNP.11:17156891 chr11:017156891 0 W/17156891-17156891 FN2494 SNP G -> A AC=1;AN=200;BQB=0.0476237;DP=4537;DP4=2013,2260,15,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00462861;MQB=3.63534e-05;MQSB=0.579027;RPB=0.988243;SGB=12.7003;VDB=0.751196;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T542|1498|LOC_Os11g29570|protein_coding|CODING|LOC_Os11g29570.1|2|1) FN-140.SNP.11:17158004 chr11:017158004 0 W/17158004-17158004 FN-140 Single Base Substitution C-T INTRON HET SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN2481.SNP.11:17158207 chr11:017158207 0 W/17158207-17158207 FN2481 SNP G -> A AC=2;AN=200;BQB=0.723746;DP=4292;DP4=2196,1689,19,16;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.0170084;MQB=2.25666e-06;MQSB=0.00185373;RPB=0.522396;SGB=155.578;VDB=0.144037;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R159*|1498|LOC_Os11g29570|protein_coding|CODING|LOC_Os11g29570.1|1|1);LOF=(LOC_Os11g29570|LOC_Os11g29570|1|1.00);NMD=(LOC_Os11g29570|LOC_Os11g29570|1|1.00) FN1358-S.SNP.11:17162502 chr11:017162502 0 W/17162502-17162502 FN1358-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN2332.SNP.11:17162596 chr11:017162596 0 W/17162596-17162596 FN2332 SNP T -> G AC=1;AN=192;BQB=0.425577;DP=3904;DP4=1700,1305,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000256148;MQB=1.08767e-09;MQSB=2.33252e-05;RPB=0.513547;SGB=19.8696;VDB=0.0255323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.11:17163887 chr11:017163887 0 W/17163887-17163887 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.999818;DP=4887;DP4=2382,2285,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.5699e-13;MQSB=0.999632;RPB=0.962266;SGB=95.7111;VDB=0.652421;EFF=INTERGENIC(MODIFIER||||||||||1) FN3980-S.SNP.11:17163887 chr11:017163887 0 W/17163887-17163887 FN3980-S SNP G -> T AC=2;AN=168;BQB=0.984151;DP=3312;DP4=1601,1529,12,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.88495e-18;MQSB=0.999899;RPB=0.118761;SGB=29.9454;VDB=0.515002;EFF=INTERGENIC(MODIFIER||||||||||1) FN4161-S.SNP.11:17164098 chr11:017164098 0 W/17164098-17164098 FN4161-S SNP G -> A AC=2;AN=170;BQB=0.98946;DP=2712;DP4=1415,1185,14,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.34608e-17;MQSB=0.999427;RPB=0.994292;SGB=93.4031;VDB=0.854072;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.11:17169858 chr11:017169858 0 W/17169858-17169858 FN2375 SNP C -> T AC=1;AN=192;BQB=0.358942;DP=4872;DP4=2382,2212,6,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=0.000208496;MQSB=0.881809;RPB=0.990763;SGB=25.5227;VDB=0.525878;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.11:17171096 chr11:017171096 0 W/17171096-17171096 FN916-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g29610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN1015-S.SNP.11:17174594 chr11:017174594 0 W/17174594-17174594 FN1015-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g29610 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3298-S.SNP.11:17194958 chr11:017194958 0 W/17194958-17194958 FN3298-S SNP A -> G AC=1;AN=184;BQB=0.953254;DP=2426;DP4=1334,973,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.31307e-05;MQSB=0.0107014;RPB=0.814642;SGB=30.6558;VDB=0.624078;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.11:17199177 chr11:017199177 0 W/17199177-17199177 FN3506-S SNP C -> A AC=1;AN=188;BQB=0.977913;DP=3213;DP4=1514,1627,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.1465e-07;MQSB=0.799293;RPB=0.60737;SGB=18.4463;VDB=0.085717;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.11:17199702 chr11:017199702 0 W/17199702-17199702 FN389-S Single Base Substitution A-G INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2533-S.SNP.11:17205727 chr11:017205727 0 W/17205727-17205727 FN2533-S SNP C -> A AC=1;AN=198;BQB=0.87658;DP=4290;DP4=1965,2140,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.58279e-08;MQSB=0.995934;RPB=0.999996;SGB=26.7492;VDB=0.86937;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N232K|249|LOC_Os11g29680|protein_coding|CODING|LOC_Os11g29680.1|2|1) FN576-S.SNP.11:17206488 chr11:017206488 0 W/17206488-17206488 FN576-S Single Base Substitution G-A INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN2158-S.SNP.11:17208615 chr11:017208615 0 W/17208615-17208615 FN2158-S SNP G -> A AC=2;AN=168;BQB=0.25207;DP=3879;DP4=1900,1923,16,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.15212e-18;MQSB=0.916547;RPB=0.890194;SGB=-94.7442;VDB=0.250601;EFF=INTRON(MODIFIER||||133|LOC_Os11g29690|protein_coding|CODING|LOC_Os11g29690.1|1|1) FN-168.SNP.11:17211045 chr11:017211045 0 W/17211045-17211045 FN-168 Single Base Substitution G-A INTRON HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN2608-S.SNP.11:17223772 chr11:017223772 0 W/17223772-17223772 FN2608-S SNP A -> T AC=1;AN=198;BQB=0.716906;DP=3718;DP4=1674,1882,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.29633e-07;MQSB=0.977719;RPB=0.996807;SGB=40.3588;VDB=0.600763;EFF=INTERGENIC(MODIFIER||||||||||1) FN833-S.SNP.11:17229967 chr11:017229967 0 W/17229967-17229967 FN833-S Single Base Substitution C-T UTR_5_PRIME HOMO SNo: 746, Mutant_ID: FN833-S, Generation: M2, Mutations: 67, Genes: 24, Seed availability: Yes. FN4017-S.SNP.11:17230432 chr11:017230432 0 W/17230432-17230432 FN4017-S SNP T -> C AC=2;AN=168;BQB=0.511078;DP=1572;DP4=683,701,7,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.47808e-09;MQSB=0.885131;RPB=0.817039;SGB=27.0464;VDB=0.0412401;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V97A|358|LOC_Os11g29710|protein_coding|CODING|LOC_Os11g29710.1|2|1) FN1633-S.SNP.11:17237260 chr11:017237260 0 W/17237260-17237260 FN1633-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g29720 cytochrome P450, putative, expressed SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN4031-S.SNP.11:17240722 chr11:017240722 0 W/17240722-17240722 FN4031-S SNP G -> A AC=1;AN=168;BQB=0.94627;DP=2719;DP4=1366,1225,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.05117e-11;MQSB=0.993414;RPB=0.573698;SGB=74.3269;VDB=0.220791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.11:17241130 chr11:017241130 0 W/17241130-17241130 FN2530-S SNP C -> A AC=1;AN=198;BQB=0.941139;DP=4335;DP4=2177,1918,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.15526e-09;MQSB=0.864846;RPB=0.639371;SGB=31.9395;VDB=0.457246;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.11:17244195 chr11:017244195 0 W/17244195-17244195 FN3886-S SNP T -> A AC=1;AN=158;BQB=0.788833;DP=2312;DP4=1089,1086,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000161281;MQSB=0.856039;RPB=0.971107;SGB=23.9652;VDB=0.834894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2418.SNP.11:17245684 chr11:017245684 0 W/17245684-17245684 FN2418 SNP C -> A AC=1;AN=200;BQB=0.995159;DP=4002;DP4=2217,1471,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.68273e-09;MQSB=0.708543;RPB=0.363304;SGB=26.8797;VDB=0.169013;EFF=INTRON(MODIFIER||||491|LOC_Os11g29730|protein_coding|CODING|LOC_Os11g29730.1|5|1) FN409-S.SNP.11:17246426 chr11:017246426 0 W/17246426-17246426 FN409-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN940-S.SNP.11:17252590 chr11:017252590 0 W/17252590-17252590 FN940-S Single Base Substitution G-C INTERGENIC HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3466-S.SNP.11:17259382 chr11:017259382 0 W/17259382-17259382 FN3466-S SNP C -> G AC=1;AN=184;BQB=0.490451;DP=3047;DP4=1499,1473,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38186e-07;MQSB=0.687606;RPB=0.488169;SGB=42.7914;VDB=0.112958;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.11:17260325 chr11:017260325 0 W/17260325-17260325 W138-2-1 Single Base Substitution C-G INTRON HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN2339.SNP.11:17263177 chr11:017263177 0 W/17263177-17263177 FN2339 SNP C -> A AC=1;AN=192;BQB=0.602922;DP=5113;DP4=2248,2500,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.34658e-13;MQSB=0.805675;RPB=0.966898;SGB=64.7304;VDB=0.0989011;EFF=INTRON(MODIFIER||||842|LOC_Os11g29750|protein_coding|CODING|LOC_Os11g29750.1|7|1) FN1049-S.SNP.11:17264519 chr11:017264519 0 W/17264519-17264519 FN1049-S Single Base Substitution C-T INTRON HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN406-S.SNP.11:17265683 chr11:017265683 0 W/17265683-17265683 FN406-S Single Base Substitution A-G INTERGENIC HET SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN1430-S.SNP.11:17268542 chr11:017268542 0 W/17268542-17268542 FN1430-S Single Base Substitution A-G INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN963-S.SNP.11:17270329 chr11:017270329 0 W/17270329-17270329 FN963-S Single Base Substitution C-G INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN_809-6-1.SNP.11:17271385 chr11:017271385 0 W/17271385-17271385 FN_809-6-1 Single Base Substitution G-T Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN3700-S.SNP.11:17279531 chr11:017279531 0 W/17279531-17279531 FN3700-S SNP T -> C AC=2;AN=190;BQB=0.953916;DP=2891;DP4=1128,1593,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.16845e-15;MQSB=0.810266;RPB=0.997457;SGB=126.511;VDB=0.610402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.11:17281525 chr11:017281525 0 W/17281525-17281525 FN1192-S Single Base Substitution G-A INTERGENIC HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3296-S.SNP.11:17281525 chr11:017281525 0 W/17281525-17281525 FN3296-S SNP G -> A AC=2;AN=184;BQB=0.998838;DP=2851;DP4=1230,1522,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.32237e-13;MQSB=0.777801;RPB=0.387094;SGB=70.9657;VDB=0.0494689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3945-S.SNP.11:17281525 chr11:017281525 0 W/17281525-17281525 FN3945-S SNP G -> A AC=2;AN=168;BQB=0.996114;DP=2472;DP4=996,1376,6,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23187e-10;MQSB=0.886681;RPB=0.475338;SGB=55.3328;VDB=0.511212;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.11:17285958 chr11:017285958 0 W/17285958-17285958 FN4078-S SNP C -> T AC=1;AN=182;BQB=0.891318;DP=2710;DP4=1394,1260,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.90359e-09;MQSB=0.995107;RPB=0.667032;SGB=57.644;VDB=0.706175;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.11:17287190 chr11:017287190 0 W/17287190-17287190 FN939-S Single Base Substitution C-A INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN939-S.SNP.11:17287191 chr11:017287191 0 W/17287191-17287191 FN939-S Single Base Substitution C-A INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2398.SNP.11:17293421 chr11:017293421 0 W/17293421-17293421 FN2398 SNP A -> G AC=1;AN=200;BQB=0.99969;DP=5097;DP4=2602,2236,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82159e-06;MQSB=0.99786;RPB=0.870159;SGB=13.8539;VDB=0.285576;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S774|1036|LOC_Os11g29790|protein_coding|CODING|LOC_Os11g29790.1|1|1) FN2531-S.SNP.11:17294588 chr11:017294588 0 W/17294588-17294588 FN2531-S SNP T -> C AC=1;AN=198;BQB=0.999857;DP=3952;DP4=2020,1633,5,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.12267e-07;MQSB=0.91926;RPB=0.233598;SGB=11.1786;VDB=0.0546694;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.11:17296351 chr11:017296351 0 W/17296351-17296351 FN3366-S SNP T -> G AC=1;AN=184;BQB=0.972578;DP=2523;DP4=777,1333,18,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000396354;MQB=1.78861e-15;MQSB=0.978459;RPB=0.489317;SGB=-284.061;VDB=0.929325;EFF=INTERGENIC(MODIFIER||||||||||1) FN3678-S.SNP.11:17298152 chr11:017298152 0 W/17298152-17298152 FN3678-S SNP G -> A AC=1;AN=190;BQB=0.998413;DP=2192;DP4=1196,899,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00136166;MQSB=0.329834;RPB=0.956719;SGB=35.4339;VDB=0.353119;EFF=INTERGENIC(MODIFIER||||||||||1) FN922-S.SNP.11:17300626 chr11:017300626 0 W/17300626-17300626 FN922-S Single Base Substitution T-G INTERGENIC HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN711-S.SNP.11:17301569 chr11:017301569 0 W/17301569-17301569 FN711-S Single Base Substitution C-T INTERGENIC HOMO SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN477-S.SNP.11:17308906 chr11:017308906 0 W/17308906-17308906 FN477-S Single Base Substitution T-A INTERGENIC HET SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN2436.SNP.11:17312130 chr11:017312130 0 W/17312130-17312130 FN2436 SNP G -> A AC=1;AN=200;BQB=0.80651;DP=4436;DP4=2206,2006,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22826e-05;MQSB=0.639151;RPB=0.0633877;SGB=16.4591;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.11:17312135 chr11:017312135 0 W/17312135-17312135 FN1402-S Single Base Substitution T-C INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN632-S.SNP.11:17315849 chr11:017315849 0 W/17315849-17315849 FN632-S Single Base Substitution C-T INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2638-S.SNP.11:17316080 chr11:017316080 0 W/17316080-17316080 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.964107;DP=4659;DP4=2043,2351,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00107319;MQB=3.26147e-10;MQSB=0.595981;RPB=0.0320821;SGB=68.0801;VDB=0.166173;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.11:17316100 chr11:017316100 0 W/17316100-17316100 FN2638-S SNP G -> T AC=1;AN=200;BQB=0.880534;DP=4689;DP4=1954,2491,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00106633;MQB=4.54962e-13;MQSB=0.160123;RPB=0.0187622;SGB=91.1059;VDB=0.0512727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.11:17316101 chr11:017316101 0 W/17316101-17316101 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.995879;DP=4677;DP4=2021,2360,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00106906;MQB=1.54312e-12;MQSB=0.605341;RPB=0.0253907;SGB=69.1109;VDB=0.0406862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.11:17322902 chr11:017322902 0 W/17322902-17322902 FN2241-S SNP C -> T AC=1;AN=190;BQB=0.809937;DP=4914;DP4=2240,2334,14,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.73898e-13;MQSB=0.986289;RPB=0.976773;SGB=22.7576;VDB=0.303673;EFF=INTRON(MODIFIER||||416|LOC_Os11g29840|protein_coding|CODING|LOC_Os11g29840.1|3|1) FN2725-S.SNP.11:17331039 chr11:017331039 0 W/17331039-17331039 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.87785;DP=4831;DP4=2367,2247,9,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11537e-11;MQSB=0.911897;RPB=0.72192;SGB=34.6953;VDB=0.415735;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S177L|289|LOC_Os11g29850|protein_coding|CODING|LOC_Os11g29850.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S177L|276|LOC_Os11g29850|protein_coding|CODING|LOC_Os11g29850.2|5|1),SPLICE_SITE_REGION(LOW||||289|LOC_Os11g29850|protein_coding|CODING|LOC_Os11g29850.1|5|1),SPLICE_SITE_REGION(LOW||||276|LOC_Os11g29850|protein_coding|CODING|LOC_Os11g29850.2|5|1) FN2386.SNP.11:17333300 chr11:017333300 0 W/17333300-17333300 FN2386 SNP C -> G AC=1;AN=192;BQB=0.880216;DP=5175;DP4=2214,2667,16,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.13303e-16;MQSB=0.961319;RPB=0.826737;SGB=-5.17475;VDB=0.613122;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.11:17336908 chr11:017336908 0 W/17336908-17336908 FN437-S Single Base Substitution G-C INTERGENIC HET SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN754-S.SNP.11:17338103 chr11:017338103 0 W/17338103-17338103 FN754-S Single Base Substitution G-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN505-S.SNP.11:17340565 chr11:017340565 0 W/17340565-17340565 FN505-S Single Base Substitution A-C INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN1471-S.SNP.11:17344380 chr11:017344380 0 W/17344380-17344380 FN1471-S SNP C -> T AC=1;AN=188;BQB=0.428992;DP=3335;DP4=1817,1492,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.08867e-05;MQSB=0.993634;RPB=0.98979;SGB=15.903;VDB=0.254982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3490-S.SNP.11:17345185 chr11:017345185 0 W/17345185-17345185 FN3490-S SNP A -> G AC=1;AN=184;BQB=0.807174;DP=2525;DP4=1072,1354,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.79772e-10;MQSB=0.988271;RPB=0.919593;SGB=66.8296;VDB=0.818126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.11:17349851 chr11:017349851 0 W/17349851-17349851 FN3968-S SNP G -> A AC=1;AN=168;BQB=0.807538;DP=2344;DP4=1031,1210,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.04906e-12;MQSB=0.995614;RPB=0.997858;SGB=8.48315;VDB=0.111864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.11:17349852 chr11:017349852 0 W/17349852-17349852 FN3968-S SNP C -> A AC=1;AN=168;BQB=0.976191;DP=2346;DP4=1049,1204,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.00687e-12;MQSB=0.993584;RPB=0.87175;SGB=-14.5109;VDB=0.0520133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.11:17361974 chr11:017361974 0 W/17361974-17361974 FN2625-S SNP T -> G AC=1;AN=200;BQB=0.905103;DP=4756;DP4=2369,2171,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.16224e-18;MQSB=0.985185;RPB=0.933812;SGB=137.158;VDB=0.518164;EFF=INTRON(MODIFIER||||1427|LOC_Os11g29880|protein_coding|CODING|LOC_Os11g29880.1|4|1) FN1758-S.SNP.11:17362099 chr11:017362099 0 W/17362099-17362099 FN1758-S SNP G -> C AC=1;AN=188;BQB=0.978553;DP=1522;DP4=574,907,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.60148e-07;MQSB=0.649168;RPB=0.379475;SGB=35.9843;VDB=0.751396;EFF=INTRON(MODIFIER||||1427|LOC_Os11g29880|protein_coding|CODING|LOC_Os11g29880.1|4|1) FN1434-S.SNP.11:17365260 chr11:017365260 0 W/17365260-17365260 FN1434-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g29890 retrotransposon protein, putative, unclassified, expressed SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3823-S.SNP.11:17365937 chr11:017365937 0 W/17365937-17365937 FN3823-S SNP C -> T AC=1;AN=190;BQB=0.999804;DP=3412;DP4=1857,1462,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07359e-12;MQSB=0.870457;RPB=0.992887;SGB=80.9724;VDB=0.780824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R291Q|932|LOC_Os11g29890|protein_coding|CODING|LOC_Os11g29890.1|3|1) FN2221-S.SNP.11:17366254 chr11:017366254 0 W/17366254-17366254 FN2221-S SNP C -> T AC=1;AN=190;BQB=0.962661;DP=4627;DP4=2392,1912,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00259347;MQB=5.1454e-09;MQSB=0.136988;RPB=0.911095;SGB=41.5369;VDB=0.496307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G215R|932|LOC_Os11g29890|protein_coding|CODING|LOC_Os11g29890.1|2|1) W385-6-8-4.SNP.11:17368602 chr11:017368602 0 W/17368602-17368602 W385-6-8-4 Single Base Substitution A-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. W385-6-8-4.SNP.11:17368603 chr11:017368603 0 W/17368603-17368603 W385-6-8-4 Single Base Substitution C-T INTERGENIC HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN3324-S.SNP.11:17369290 chr11:017369290 0 W/17369290-17369290 FN3324-S SNP T -> C AC=2;AN=184;BQB=0.962679;DP=2637;DP4=1248,1300,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.7852e-12;MQSB=0.998119;RPB=0.39327;SGB=98.4821;VDB=0.270302;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.11:17375797 chr11:017375797 0 W/17375797-17375797 FN-144 Single Base Substitution C-A INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-187.SNP.11:17391820 chr11:017391820 0 W/17391820-17391820 FN-187 Single Base Substitution G-A INTRON HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN4241-S.SNP.11:17396488 chr11:017396488 0 W/17396488-17396488 FN4241-S SNP T -> C AC=1;AN=170;BQB=0.72981;DP=2621;DP4=1363,1169,10,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.3448e-09;MQSB=0.978015;RPB=0.600588;SGB=62.4192;VDB=0.655698;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.11:17402386 chr11:017402386 0 W/17402386-17402386 FN895-S Single Base Substitution C-T INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN1515-S.SNP.11:17412532 chr11:017412532 0 W/17412532-17412532 FN1515-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g29970 NB-ARC domain containing protein, expressed SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN4047-S.SNP.11:17414676 chr11:017414676 0 W/17414676-17414676 FN4047-S SNP G -> A AC=2;AN=168;BQB=0.98777;DP=2507;DP4=1097,1324,9,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.8996e-08;MQSB=0.988367;RPB=0.793927;SGB=56.6036;VDB=0.62157;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N326|1184|LOC_Os11g29970|protein_coding|CODING|LOC_Os11g29970.1|3|1) FN960-S.SNP.11:17415130 chr11:017415130 0 W/17415130-17415130 FN960-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g29970 NB-ARC domain containing protein, expressed SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1526-S.SNP.11:17428514 chr11:017428514 0 W/17428514-17428514 FN1526-S Single Base Substitution G-A INTRON Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN3541-S.SNP.11:17430207 chr11:017430207 0 W/17430207-17430207 FN3541-S SNP G -> A AC=2;AN=188;BQB=0.932288;DP=3271;DP4=1933,1268,10,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48296e-11;MQSB=0.976744;RPB=0.896936;SGB=33.7061;VDB=0.618353;EFF=INTERGENIC(MODIFIER||||||||||1) FN-310.SNP.11:17431283 chr11:017431283 0 W/17431283-17431283 FN-310 Single Base Substitution T-C INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-78.SNP.11:17441721 chr11:017441721 0 W/17441721-17441721 FN-78 Single Base Substitution A-T INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN-78.SNP.11:17441722 chr11:017441722 0 W/17441722-17441722 FN-78 Single Base Substitution A-T INTRON HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN1085-S.SNP.11:17477102 chr11:017477102 0 W/17477102-17477102 FN1085-S Single Base Substitution C-T INTERGENIC HET SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN2232-S.SNP.11:17480993 chr11:017480993 0 W/17480993-17480993 FN2232-S SNP G -> A AC=1;AN=190;BQB=0.626715;DP=4940;DP4=2206,2363,8,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.27891e-13;MQSB=0.999338;RPB=0.723668;SGB=46.6446;VDB=0.683677;EFF=INTRON(MODIFIER||||601|LOC_Os11g30050|protein_coding|CODING|LOC_Os11g30050.1|3|1) FN-247.SNP.11:17481232 chr11:017481232 0 W/17481232-17481232 FN-247 Single Base Substitution T-A INTRON HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1115-S.SNP.11:17500112 chr11:017500112 0 W/17500112-17500112 FN1115-S Single Base Substitution C-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3758-S.SNP.11:17500943 chr11:017500943 0 W/17500943-17500943 FN3758-S SNP T -> C AC=1;AN=190;BQB=0.517533;DP=1953;DP4=1119,734,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.163338;MQB=0.115049;MQSB=0;RPB=0.530765;SGB=18.552;VDB=0.60582;EFF=INTRON(MODIFIER||||464|LOC_Os11g30080|protein_coding|CODING|LOC_Os11g30080.1|1|1) FN758-S.SNP.11:17514309 chr11:017514309 0 W/17514309-17514309 FN758-S Single Base Substitution G-C INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN790-S.SNP.11:17516436 chr11:017516436 0 W/17516436-17516436 FN790-S Single Base Substitution G-A INTERGENIC HOMO SNo: 710, Mutant_ID: FN790-S, Generation: M2, Mutations: 41, Genes: 38, Seed availability: Yes. FN4136-S.SNP.11:17519462 chr11:017519462 0 W/17519462-17519462 FN4136-S SNP T -> A AC=2;AN=170;BQB=0.749885;DP=2502;DP4=1345,1029,9,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.00039968;MQB=4.99853e-08;MQSB=0.954814;RPB=0.816599;SGB=27.2119;VDB=0.174649;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.11:17520066 chr11:017520066 0 W/17520066-17520066 FN3871-S SNP T -> A AC=1;AN=158;BQB=0.9754;DP=2006;DP4=831,1118,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=38;MQ0F=0.0428714;MQB=0.368761;MQSB=1.09161e-41;RPB=0.916158;SGB=29.5899;VDB=0.538025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.11:17520336 chr11:017520336 0 W/17520336-17520336 FN3729-S SNP T -> C AC=2;AN=190;BQB=0.724797;DP=1907;DP4=607,1227,4,16;HOB=0.020831;ICB=0.494793;MQ=30;MQ0F=0.156791;MQB=0.838463;MQSB=6.3387e-08;RPB=0.409832;SGB=36.4291;VDB=0.933346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1668-S.SNP.11:17531808 chr11:017531808 0 W/17531808-17531808 FN1668-S SNP G -> A AC=2;AN=188;BQB=1.15643e-12;DP=4002;DP4=1900,2041,31,19;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00049975;MQB=1.08057e-13;MQSB=0.00364948;RPB=0.339981;SGB=-269.218;VDB=0.760715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.11:17532345 chr11:017532345 0 W/17532345-17532345 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.760322;DP=4721;DP4=2389,2132,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.54108e-08;MQSB=0.9998;RPB=0.988085;SGB=23.6597;VDB=0.402837;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.11:17532948 chr11:017532948 0 W/17532948-17532948 FN1689-S SNP G -> T AC=1;AN=188;BQB=0.442372;DP=3412;DP4=1817,1574,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00119355;MQSB=0.994538;RPB=0.164381;SGB=25.3545;VDB=0.187503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.11:17535226 chr11:017535226 0 W/17535226-17535226 FN2625-S SNP G -> C AC=1;AN=200;BQB=0.614977;DP=4613;DP4=2293,2124,17,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00845437;MQB=2.00276e-12;MQSB=0.918877;RPB=0.917825;SGB=71.1676;VDB=0.317523;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.11:17537958 chr11:017537958 0 W/17537958-17537958 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.247247;DP=4935;DP4=2260,2418,11,20;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000607903;MQB=9.42673e-07;MQSB=0.1824;RPB=0.920642;SGB=65.9573;VDB=0.773285;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.11:17538111 chr11:017538111 0 W/17538111-17538111 FN3594-S SNP C -> T AC=2;AN=188;BQB=0.246926;DP=2634;DP4=1100,1467,19,12;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.022779;MQB=0.197618;MQSB=5.81799e-07;RPB=0.802237;SGB=135.302;VDB=0.301176;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1346T|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|12|1) FN924-S.SNP.11:17538111 chr11:017538111 0 W/17538111-17538111 FN924-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g30170 transposon protein, putative, unclassified, expressed SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN1057-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN1057-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os11g30170 transposon protein, putative, unclassified, expressed SNo: 947, Mutant_ID: FN1057-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN1392-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN1392-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os11g30170 transposon protein, putative, unclassified, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2218-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN2218-S SNP C -> A AC=2;AN=190;BQB=0.218114;DP=3586;DP4=1430,1869,14,15;HOB=0.020831;ICB=0.494793;MQ=26;MQ0F=0.185722;MQB=0.306802;MQSB=6.286e-08;RPB=0.218447;SGB=92.9626;VDB=0.422045;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E224*|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|2|1);LOF=(LOC_Os11g30170|LOC_Os11g30170|1|1.00);NMD=(LOC_Os11g30170|LOC_Os11g30170|1|1.00) FN2345.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN2345 SNP C -> A AC=2;AN=192;BQB=0.222731;DP=3696;DP4=1486,1918,24,27;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.195346;MQB=0.790615;MQSB=0.0829842;RPB=0.827017;SGB=60.5426;VDB=0.0444799;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E224*|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|2|1);LOF=(LOC_Os11g30170|LOC_Os11g30170|1|1.00);NMD=(LOC_Os11g30170|LOC_Os11g30170|1|1.00) FN2602-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN2602-S SNP C -> A AC=2;AN=198;BQB=0.211146;DP=3246;DP4=1325,1702,21,32;HOB=0.019998;ICB=0.495001;MQ=26;MQ0F=0.200246;MQB=0.000159799;MQSB=0.883518;RPB=0.236127;SGB=14.6598;VDB=0.510492;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E224*|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|2|1);LOF=(LOC_Os11g30170|LOC_Os11g30170|1|1.00);NMD=(LOC_Os11g30170|LOC_Os11g30170|1|1.00) FN3837-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN3837-S SNP C -> A AC=2;AN=190;BQB=0.945325;DP=1806;DP4=785,931,9,8;HOB=0.020831;ICB=0.494793;MQ=23;MQ0F=0.188261;MQB=0.51147;MQSB=0.000276192;RPB=0.975214;SGB=71.8647;VDB=0.299912;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E224*|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|2|1);LOF=(LOC_Os11g30170|LOC_Os11g30170|1|1.00);NMD=(LOC_Os11g30170|LOC_Os11g30170|1|1.00) FN3910-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN3910-S SNP C -> A AC=2;AN=158;BQB=0.99668;DP=1540;DP4=715,763,7,8;HOB=0.024996;ICB=0.493752;MQ=22;MQ0F=0.211688;MQB=0.993171;MQSB=1.73424e-05;RPB=0.9582;SGB=60.1755;VDB=0.683565;EFF=STOP_GAINED(HIGH|NONSENSE|Gag/Tag|E224*|1350|LOC_Os11g30170|protein_coding|CODING|LOC_Os11g30170.1|2|1);LOF=(LOC_Os11g30170|LOC_Os11g30170|1|1.00);NMD=(LOC_Os11g30170|LOC_Os11g30170|1|1.00) FN691-S.SNP.11:17542950 chr11:017542950 0 W/17542950-17542950 FN691-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os11g30170 transposon protein, putative, unclassified, expressed SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN1441-S.SNP.11:17545984 chr11:017545984 0 W/17545984-17545984 FN1441-S Single Base Substitution T-G INTERGENIC HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN3359-S.SNP.11:17558313 chr11:017558313 0 W/17558313-17558313 FN3359-S SNP T -> C AC=1;AN=184;BQB=0.790106;DP=1882;DP4=680,1083,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.000820503;MQSB=0.890288;RPB=0.641796;SGB=35.1773;VDB=0.631876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2792-S.SNP.11:17572506 chr11:017572506 0 W/17572506-17572506 FN2792-S SNP A -> G AC=1;AN=198;BQB=0.960864;DP=4179;DP4=1888,2135,2,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.38231e-06;MQSB=0.835155;RPB=0.0419998;SGB=44.9538;VDB=0.00265764;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.11:17577533 chr11:017577533 0 W/17577533-17577533 FN745-S Single Base Substitution T-A INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN745-S.SNP.11:17577536 chr11:017577536 0 W/17577536-17577536 FN745-S Single Base Substitution T-C INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN-70.SNP.11:17578997 chr11:017578997 0 W/17578997-17578997 FN-70 Single Base Substitution A-C INTRON HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN780-S.SNP.11:17588804 chr11:017588804 0 W/17588804-17588804 FN780-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g30260 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN-334.SNP.11:17597017 chr11:017597017 0 W/17597017-17597017 FN-334 Single Base Substitution G-C INTERGENIC HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2532-S.SNP.11:17605259 chr11:017605259 0 W/17605259-17605259 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.906733;DP=4536;DP4=2422,1934,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.76462e-08;MQSB=0.989398;RPB=0.990417;SGB=50.9344;VDB=0.624758;EFF=INTRON(MODIFIER||||234|LOC_Os11g30320|protein_coding|CODING|LOC_Os11g30320.1|1|1) FN654-S.SNP.11:17609303 chr11:017609303 0 W/17609303-17609303 FN654-S Single Base Substitution C-T INTERGENIC HOMO SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN852-S.SNP.11:17613688 chr11:017613688 0 W/17613688-17613688 FN852-S Single Base Substitution G-A INTERGENIC HOMO SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3447-S.SNP.11:17619140 chr11:017619140 0 W/17619140-17619140 FN3447-S SNP G -> A AC=1;AN=184;BQB=0.745645;DP=3210;DP4=1919,1211,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00021323;MQSB=0.675743;RPB=0.975616;SGB=25.1826;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN3919-S.SNP.11:17620216 chr11:017620216 0 W/17620216-17620216 FN3919-S SNP C -> G AC=2;AN=158;BQB=0.944636;DP=1904;DP4=944,862,16,14;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=7.87317e-15;MQSB=0.9569;RPB=0.769265;SGB=91.3541;VDB=0.568763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2420.SNP.11:17620255 chr11:017620255 0 W/17620255-17620255 FN2420 SNP T -> C AC=1;AN=200;BQB=0.982138;DP=3451;DP4=1811,1297,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000289771;MQB=4.49413e-05;MQSB=0.193041;RPB=0.0351238;SGB=31.2392;VDB=0.0498124;EFF=INTERGENIC(MODIFIER||||||||||1) FN1415-S.SNP.11:17623229 chr11:017623229 0 W/17623229-17623229 FN1415-S Single Base Substitution C-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2142-S.SNP.11:17624002 chr11:017624002 0 W/17624002-17624002 FN2142-S SNP C -> G AC=1;AN=168;BQB=0.871136;DP=3767;DP4=2062,1671,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.28297e-11;MQSB=0.925689;RPB=0.842783;SGB=48.4712;VDB=0.592405;EFF=INTERGENIC(MODIFIER||||||||||1) W500-4-7-1.SNP.11:17624294 chr11:017624294 0 W/17624294-17624294 W500-4-7-1 Single Base Substitution T-C INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN4021-S.SNP.11:17635972 chr11:017635972 0 W/17635972-17635972 FN4021-S SNP C -> T AC=1;AN=168;BQB=0.995178;DP=2019;DP4=1304,618,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000641696;MQSB=0.758809;RPB=0.642929;SGB=43.3113;VDB=0.52194;EFF=INTRON(MODIFIER||||352|LOC_Os11g30370|protein_coding|CODING|LOC_Os11g30370.1|2|1) FN3985-S.SNP.11:17636119 chr11:017636119 0 W/17636119-17636119 FN3985-S SNP A -> G AC=1;AN=168;BQB=0.601298;DP=1883;DP4=1134,646,10,3;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.0004069;MQSB=0.811023;RPB=0.718777;SGB=52.1728;VDB=0.0122632;EFF=INTRON(MODIFIER||||352|LOC_Os11g30370|protein_coding|CODING|LOC_Os11g30370.1|2|1) FN990-S.SNP.11:17644711 chr11:017644711 0 W/17644711-17644711 FN990-S Single Base Substitution T-A INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN1456-S.SNP.11:17653642 chr11:017653642 0 W/17653642-17653642 FN1456-S Single Base Substitution T-G INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN2627-S.SNP.11:17655350 chr11:017655350 0 W/17655350-17655350 FN2627-S SNP A -> G AC=1;AN=200;BQB=0.96914;DP=4934;DP4=2217,2453,4,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12586e-08;MQSB=0.990219;RPB=0.965616;SGB=21.6694;VDB=0.659492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.11:17656301 chr11:017656301 0 W/17656301-17656301 FN4279-S SNP T -> C AC=1;AN=170;BQB=0.737687;DP=1646;DP4=644,957,2,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000304592;MQSB=0.873829;RPB=0.749292;SGB=10.7821;VDB=0.111502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.11:17662531 chr11:017662531 0 W/17662531-17662531 FN2290 SNP G -> A AC=1;AN=192;BQB=0.346878;DP=4533;DP4=1949,2286,14,24;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00154423;MQB=6.71984e-11;MQSB=0.616757;RPB=0.729305;SGB=125.324;VDB=0.96379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V710I|1027|LOC_Os11g30390|protein_coding|CODING|LOC_Os11g30390.1|8|1) FN2107-S.SNP.11:17663862 chr11:017663862 0 W/17663862-17663862 FN2107-S SNP C -> T AC=1;AN=168;BQB=0.0203967;DP=3747;DP4=1955,1632,118,12;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.060048;MQB=0;MQSB=0;RPB=4.13334e-09;SGB=-2238.69;VDB=0.63504;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T892|1027|LOC_Os11g30390|protein_coding|CODING|LOC_Os11g30390.1|11|1) FN1596-S.SNP.11:17670083 chr11:017670083 0 W/17670083-17670083 FN1596-S Single Base Substitution A-G INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN496-S.SNP.11:17674458 chr11:017674458 0 W/17674458-17674458 FN496-S Single Base Substitution T-C INTRON HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN_769-4-1.SNP.11:17675301 chr11:017675301 0 W/17675301-17675301 FN_769-4-1 Single Base Substitution G-A Homo LOC_Os11g30410 ThiF family domain containing protein, putative, expressed SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN945-S.SNP.11:17678344 chr11:017678344 0 W/17678344-17678344 FN945-S Single Base Substitution A-T INTERGENIC HOMO SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN990-S.SNP.11:17678666 chr11:017678666 0 W/17678666-17678666 FN990-S Single Base Substitution T-C INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN772-S.SNP.11:17680283 chr11:017680283 0 W/17680283-17680283 FN772-S Single Base Substitution T-A INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2629-S.SNP.11:17683564 chr11:017683564 0 W/17683564-17683564 FN2629-S SNP C -> T AC=1;AN=200;BQB=0.992796;DP=4777;DP4=2466,2090,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55976e-12;MQSB=0.878835;RPB=0.845396;SGB=65.5058;VDB=0.962078;EFF=INTERGENIC(MODIFIER||||||||||1) FN978-S.SNP.11:17689817 chr11:017689817 0 W/17689817-17689817 FN978-S Single Base Substitution A-C INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN-152.SNP.11:17689890 chr11:017689890 0 W/17689890-17689890 FN-152 Single Base Substitution G-A INTERGENIC HOMO SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN4173-S.SNP.11:17692493 chr11:017692493 0 W/17692493-17692493 FN4173-S SNP C -> A AC=2;AN=170;BQB=0.828172;DP=1901;DP4=892,885,9,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.01379e-11;MQSB=0.813132;RPB=0.984394;SGB=92.2986;VDB=0.959534;EFF=INTERGENIC(MODIFIER||||||||||1) FN907-S.SNP.11:17692768 chr11:017692768 0 W/17692768-17692768 FN907-S Single Base Substitution A-C INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1504-S.SNP.11:17692818 chr11:017692818 0 W/17692818-17692818 FN1504-S Single Base Substitution C-T INTERGENIC HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN1427-S.SNP.11:17692929 chr11:017692929 0 W/17692929-17692929 FN1427-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2574-S.SNP.11:17696882 chr11:017696882 0 W/17696882-17696882 FN2574-S SNP T -> C AC=2;AN=198;BQB=0.581992;DP=4259;DP4=2091,1958,11,2;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.96268e-07;MQSB=0.010403;RPB=0.562658;SGB=1.37381;VDB=0.122248;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.11:17716746 chr11:017716746 0 W/17716746-17716746 FN1630-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g30470 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN850-S.SNP.11:17719146 chr11:017719146 0 W/17719146-17719146 FN850-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g30470 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN3479-S.SNP.11:17722807 chr11:017722807 0 W/17722807-17722807 FN3479-S SNP A -> C AC=2;AN=184;BQB=0.856918;DP=2697;DP4=1172,1334,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.58821e-12;MQSB=0.0119749;RPB=0.902936;SGB=18.9766;VDB=0.623919;EFF=INTRON(MODIFIER||||306|LOC_Os11g30484|protein_coding|CODING|LOC_Os11g30484.1|1|1) FN721-S.SNP.11:17724302 chr11:017724302 0 W/17724302-17724302 FN721-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN2535-S.SNP.11:17732187 chr11:017732187 0 W/17732187-17732187 FN2535-S SNP C -> T AC=1;AN=198;BQB=0.0405406;DP=3938;DP4=1990,1722,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=0.00335127;MQSB=0.000653329;RPB=0.809934;SGB=40.3588;VDB=0.916943;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L244|326|LOC_Os11g30510|protein_coding|CODING|LOC_Os11g30510.1|3|1) FN1338-S.SNP.11:17736481 chr11:017736481 0 W/17736481-17736481 FN1338-S Single Base Substitution C-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1109-S.SNP.11:17739769 chr11:017739769 0 W/17739769-17739769 FN1109-S Single Base Substitution G-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN3769-S.SNP.11:17742266 chr11:017742266 0 W/17742266-17742266 FN3769-S SNP T -> C AC=2;AN=190;BQB=0.811336;DP=2525;DP4=1180,1246,10,10;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=1.16742e-09;MQSB=5.93051e-05;RPB=0.349169;SGB=36.4291;VDB=0.665601;EFF=INTERGENIC(MODIFIER||||||||||1) FN2196-S.SNP.11:17748869 chr11:017748869 0 W/17748869-17748869 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.999935;DP=4916;DP4=2662,1928,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=5.67837e-14;MQSB=0.995859;RPB=0.988684;SGB=59.414;VDB=0.837296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.11:17759612 chr11:017759612 0 W/17759612-17759612 FN3837-S SNP C -> A AC=1;AN=190;BQB=0.915436;DP=2380;DP4=1126,1177,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0012605;MQB=0.00271937;MQSB=1.04531e-10;RPB=0.765609;SGB=30.8803;VDB=0.102965;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgT|R805|910|LOC_Os11g30540|protein_coding|CODING|LOC_Os11g30540.1|2|1) FN784-S.SNP.11:17766277 chr11:017766277 0 W/17766277-17766277 FN784-S Single Base Substitution A-T INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN2232-S.SNP.11:17772151 chr11:017772151 0 W/17772151-17772151 FN2232-S SNP A -> C AC=1;AN=190;BQB=0.755915;DP=4488;DP4=2187,2029,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.98228e-05;MQSB=0.99816;RPB=0.333149;SGB=71.8647;VDB=0.114529;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.11:17784818 chr11:017784818 0 W/17784818-17784818 FN2379 SNP G -> T AC=1;AN=192;BQB=0.998984;DP=2300;DP4=883,1212,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000869565;MQB=6.93886e-06;MQSB=0.000161401;RPB=0.75614;SGB=4.22611;VDB=0.316436;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.11:17785758 chr11:017785758 0 W/17785758-17785758 FN2113-S SNP G -> C AC=1;AN=168;BQB=0.980468;DP=3561;DP4=2106,1413,12,9;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0;MQB=0.000281999;MQSB=0.891898;RPB=0.706199;SGB=36.7696;VDB=0.956288;EFF=INTRON(MODIFIER||||354|LOC_Os11g30560|protein_coding|CODING|LOC_Os11g30560.1|1|1) FN2462.SNP.11:17789173 chr11:017789173 0 W/17789173-17789173 FN2462 SNP A -> T AC=1;AN=200;BQB=0.989239;DP=4738;DP4=2259,2195,2,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3966e-07;MQSB=0.973095;RPB=0.501144;SGB=6.27959;VDB=0.518968;EFF=INTRON(MODIFIER||||354|LOC_Os11g30560|protein_coding|CODING|LOC_Os11g30560.1|2|1) FN2196-S.SNP.11:17790171 chr11:017790171 0 W/17790171-17790171 FN2196-S SNP T -> C AC=1;AN=190;BQB=0.776978;DP=4988;DP4=2210,2446,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.2751e-08;MQSB=0.858996;RPB=0.997547;SGB=-13.222;VDB=0.918728;EFF=INTRON(MODIFIER||||354|LOC_Os11g30560|protein_coding|CODING|LOC_Os11g30560.1|3|1) FN540-S.SNP.11:17792706 chr11:017792706 0 W/17792706-17792706 FN540-S Single Base Substitution T-C INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN3489-S.SNP.11:17792943 chr11:017792943 0 W/17792943-17792943 FN3489-S SNP C -> A AC=1;AN=184;BQB=0.648278;DP=2600;DP4=1437,1062,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.89384e-05;MQSB=0.598765;RPB=0.76932;SGB=53.2642;VDB=0.507471;EFF=INTERGENIC(MODIFIER||||||||||1) FN3489-S.SNP.11:17792944 chr11:017792944 0 W/17792944-17792944 FN3489-S SNP G -> T AC=1;AN=184;BQB=0.486528;DP=2576;DP4=1419,1057,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=1.10497e-05;MQSB=0.509416;RPB=0.576364;SGB=39.2697;VDB=0.67567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.11:17793593 chr11:017793593 0 W/17793593-17793593 FN3830-S SNP A -> C AC=1;AN=190;BQB=0.680324;DP=2590;DP4=1135,1345,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.61611e-10;MQSB=0.998497;RPB=0.937199;SGB=36.4291;VDB=0.294129;EFF=INTRON(MODIFIER||||138|LOC_Os11g30570|protein_coding|CODING|LOC_Os11g30570.1|2|1) FN3681-S.SNP.11:17797888 chr11:017797888 0 W/17797888-17797888 FN3681-S SNP T -> C AC=1;AN=190;BQB=0.471711;DP=2887;DP4=1411,1401,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.0113118;MQSB=0.5442;RPB=0.956302;SGB=62.7569;VDB=0.466689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2375.SNP.11:17805739 chr11:017805739 0 W/17805739-17805739 FN2375 SNP G -> A AC=1;AN=192;BQB=0.000127051;DP=3810;DP4=1933,1688,8,13;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0;MQB=0.000920369;MQSB=0.0401244;RPB=0.812034;SGB=-37.5061;VDB=0.826262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.11:17807847 chr11:017807847 0 W/17807847-17807847 FN1375-S Single Base Substitution C-T INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3372-S.SNP.11:17815345 chr11:017815345 0 W/17815345-17815345 FN3372-S SNP C -> A AC=1;AN=184;BQB=0.99333;DP=2893;DP4=1458,1299,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08383e-10;MQSB=0.987708;RPB=0.547858;SGB=53.3568;VDB=0.752894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.11:17820696 chr11:017820696 0 W/17820696-17820696 FN2591-S SNP T -> C AC=1;AN=198;BQB=0.729692;DP=4619;DP4=2230,2176,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.94077e-06;MQSB=0.810654;RPB=0.205659;SGB=18.9639;VDB=0.356155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3750-S.SNP.11:17824527 chr11:017824527 0 W/17824527-17824527 FN3750-S SNP C -> T AC=2;AN=190;BQB=0.979652;DP=1658;DP4=721,848,11,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.98757e-12;MQSB=0.370114;RPB=0.808331;SGB=83.1889;VDB=0.415819;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.11:17830850 chr11:017830850 0 W/17830850-17830850 FN472-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g30620 expressed protein SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN455-S.SNP.11:17831566 chr11:017831566 0 W/17831566-17831566 FN455-S Single Base Substitution T-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN455-S.SNP.11:17831567 chr11:017831567 0 W/17831567-17831567 FN455-S Single Base Substitution C-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN455-S.SNP.11:17831569 chr11:017831569 0 W/17831569-17831569 FN455-S Single Base Substitution C-T INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1094-S.SNP.11:17833607 chr11:017833607 0 W/17833607-17833607 FN1094-S Single Base Substitution G-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1568-S.SNP.11:17833607 chr11:017833607 0 W/17833607-17833607 FN1568-S Single Base Substitution G-T INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1717-S.SNP.11:17833607 chr11:017833607 0 W/17833607-17833607 FN1717-S SNP G -> T AC=1;AN=188;BQB=0.474726;DP=1890;DP4=1131,722,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=2.05444e-05;MQSB=0.973476;RPB=0.0264316;SGB=20.9896;VDB=0.458705;EFF=INTERGENIC(MODIFIER||||||||||1) FN242-S.SNP.11:17833607 chr11:017833607 0 W/17833607-17833607 FN242-S Single Base Substitution G-T INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2197-S.SNP.11:17837150 chr11:017837150 0 W/17837150-17837150 FN2197-S SNP G -> A AC=1;AN=190;BQB=0.00488621;DP=5005;DP4=2260,1741,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000999001;MQB=0.111663;MQSB=0.542475;RPB=0.0378193;SGB=-14.3297;VDB=0.329102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A70V|158|LOC_Os11g30640|protein_coding|CODING|LOC_Os11g30640.1|1|1) FN1497-S.SNP.11:17837728 chr11:017837728 0 W/17837728-17837728 FN1497-S Single Base Substitution G-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN909-S.SNP.11:17840071 chr11:017840071 0 W/17840071-17840071 FN909-S Single Base Substitution C-T INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN909-S.SNP.11:17840072 chr11:017840072 0 W/17840072-17840072 FN909-S Single Base Substitution C-T INTERGENIC HET SNo: 815, Mutant_ID: FN909-S, Generation: M2, Mutations: 77, Genes: 30, Seed availability: Yes. FN2380.SNP.11:17841190 chr11:017841190 0 W/17841190-17841190 FN2380 SNP G -> A AC=1;AN=192;BQB=0.584695;DP=4674;DP4=1868,2568,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021395;MQB=7.16004e-06;MQSB=0.00229537;RPB=0.298814;SGB=32.6514;VDB=0.542119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.11:17845764 chr11:017845764 0 W/17845764-17845764 FN3775-S SNP C -> G AC=2;AN=190;BQB=0.86497;DP=2809;DP4=1334,1368,13,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.09213e-17;MQSB=0.981813;RPB=0.885336;SGB=135.619;VDB=0.428788;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G652A|852|LOC_Os11g30650|protein_coding|CODING|LOC_Os11g30650.1|5|1) FN1024-S.SNP.11:17856271 chr11:017856271 0 W/17856271-17856271 FN1024-S Single Base Substitution C-T INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN2357.SNP.11:17857335 chr11:017857335 0 W/17857335-17857335 FN2357 SNP C -> A AC=1;AN=192;BQB=0.569822;DP=4994;DP4=2399,2210,18,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.10438e-15;MQSB=0.927832;RPB=0.930829;SGB=62.2505;VDB=0.0339085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2668-S.SNP.11:17858815 chr11:017858815 0 W/17858815-17858815 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.481102;DP=4354;DP4=1980,2067,21,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.24013e-17;MQSB=0.925736;RPB=0.71702;SGB=108.768;VDB=0.448984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2782-S.SNP.11:17860464 chr11:017860464 0 W/17860464-17860464 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.999912;DP=3710;DP4=1734,1787,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.41709e-13;MQSB=0.816059;RPB=0.466925;SGB=90.9049;VDB=0.29098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.11:17860487 chr11:017860487 0 W/17860487-17860487 FN3798-S SNP T -> C AC=1;AN=190;BQB=0.874012;DP=2542;DP4=1027,1356,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.57774e-08;MQSB=0.774597;RPB=0.656908;SGB=28.7675;VDB=0.866608;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.11:17872175 chr11:017872175 0 W/17872175-17872175 FN2471 SNP A -> T AC=2;AN=200;BQB=0.47201;DP=4711;DP4=2030,2099,32,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05908e-34;MQSB=0.387931;RPB=0.969007;SGB=292.742;VDB=0.917184;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.11:17876829 chr11:017876829 0 W/17876829-17876829 FN2279-S SNP C -> T AC=1;AN=188;BQB=0.981978;DP=5000;DP4=2181,2461,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.59775e-07;MQSB=0.845507;RPB=0.527846;SGB=23.6597;VDB=0.790252;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.11:17882325 chr11:017882325 0 W/17882325-17882325 FN4240-S SNP G -> A AC=1;AN=170;BQB=0.965373;DP=2494;DP4=1245,1202,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.01779e-05;MQSB=0.0026729;RPB=0.290359;SGB=27.9928;VDB=0.617745;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L300F|889|LOC_Os11g30700|protein_coding|CODING|LOC_Os11g30700.1|3|1) FN3493-S.SNP.11:17882344 chr11:017882344 0 W/17882344-17882344 FN3493-S SNP C -> T AC=2;AN=184;BQB=0.685936;DP=3230;DP4=1546,1532,25,21;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=3.058e-12;MQSB=0.00025678;RPB=0.899415;SGB=101.451;VDB=0.661153;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G293|889|LOC_Os11g30700|protein_coding|CODING|LOC_Os11g30700.1|3|1) FN2637-S.SNP.11:17891740 chr11:017891740 0 W/17891740-17891740 FN2637-S SNP G -> T AC=1;AN=200;BQB=0.732045;DP=4939;DP4=2235,2482,9,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00020247;MQB=6.13917e-11;MQSB=0.420894;RPB=0.796086;SGB=65.5058;VDB=0.769698;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D131Y|149|LOC_Os11g30720|protein_coding|CODING|LOC_Os11g30720.1|2|1) FN1435-S.SNP.11:17896267 chr11:017896267 0 W/17896267-17896267 FN1435-S Single Base Substitution T-A INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN1103-S.SNP.11:17898471 chr11:017898471 0 W/17898471-17898471 FN1103-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g30740 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN1424-S.SNP.11:17902605 chr11:017902605 0 W/17902605-17902605 FN1424-S Single Base Substitution C-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN3375-S.SNP.11:17903727 chr11:017903727 0 W/17903727-17903727 FN3375-S SNP G -> C AC=1;AN=184;BQB=0.722874;DP=3302;DP4=1454,1737,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000341802;MQSB=0.0136016;RPB=0.99745;SGB=32.2261;VDB=0.70085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2398.SNP.11:17913994 chr11:017913994 0 W/17913994-17913994 FN2398 SNP A -> T AC=1;AN=200;BQB=0.999149;DP=4662;DP4=2138,2208,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25196e-14;MQSB=0.796083;RPB=0.999746;SGB=45.1159;VDB=0.721702;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.11:17916117 chr11:017916117 0 W/17916117-17916117 FN3840-S SNP T -> C AC=1;AN=190;BQB=0.769257;DP=2620;DP4=1382,1137,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.32292e-10;MQSB=0.972533;RPB=0.991471;SGB=33.8752;VDB=0.654511;EFF=INTERGENIC(MODIFIER||||||||||1) FN861-S.SNP.11:17917803 chr11:017917803 0 W/17917803-17917803 FN861-S Single Base Substitution G-C INTERGENIC HOMO SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN3918-S.SNP.11:17931153 chr11:017931153 0 W/17931153-17931153 FN3918-S SNP C -> T AC=1;AN=158;BQB=0.989153;DP=2370;DP4=1116,1162,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.68505e-05;MQSB=0.838769;RPB=0.948412;SGB=33.9591;VDB=0.428039;EFF=INTERGENIC(MODIFIER||||||||||1) FN3853-S.SNP.11:17931517 chr11:017931517 0 W/17931517-17931517 FN3853-S SNP C -> T AC=1;AN=158;BQB=0.984026;DP=1886;DP4=870,939,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.12288e-05;MQSB=0.998136;RPB=0.962949;SGB=25.2211;VDB=0.604698;EFF=INTERGENIC(MODIFIER||||||||||1) FN-66.SNP.11:17938952 chr11:017938952 0 W/17938952-17938952 FN-66 Single Base Substitution T-C INTRON HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN3789-S.SNP.11:17939232 chr11:017939232 0 W/17939232-17939232 FN3789-S SNP A -> T AC=1;AN=190;BQB=0.900893;DP=2674;DP4=1436,1123,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.96696e-07;MQSB=0.990278;RPB=0.133372;SGB=44.5415;VDB=0.0607471;EFF=INTRON(MODIFIER||||683|LOC_Os11g30790|protein_coding|CODING|LOC_Os11g30790.1|3|1) FN865-S.SNP.11:17940552 chr11:017940552 0 W/17940552-17940552 FN865-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN-264.SNP.11:17942396 chr11:017942396 0 W/17942396-17942396 FN-264 Single Base Substitution T-G INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. W138-2-1.SNP.11:17944292 chr11:017944292 0 W/17944292-17944292 W138-2-1 Single Base Substitution G-T INTRON HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1712-S.SNP.11:17947347 chr11:017947347 0 W/17947347-17947347 FN1712-S SNP C -> T AC=2;AN=188;BQB=0.538732;DP=4178;DP4=2310,1795,31,21;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00143609;MQB=3.70083e-27;MQSB=0.28976;RPB=0.673857;SGB=117.635;VDB=0.07662;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D71N|276|LOC_Os11g30820|protein_coding|CODING|LOC_Os11g30820.1|3|1) FN1712-S.SNP.11:17947349 chr11:017947349 0 W/17947349-17947349 FN1712-S SNP G -> T AC=2;AN=188;BQB=0.404034;DP=4154;DP4=2299,1782,33,23;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00144439;MQB=9.10288e-25;MQSB=0.188916;RPB=0.998506;SGB=-174.882;VDB=0.109667;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A70D|276|LOC_Os11g30820|protein_coding|CODING|LOC_Os11g30820.1|3|1) FN1411-S.SNP.11:17949951 chr11:017949951 0 W/17949951-17949951 FN1411-S Single Base Substitution G-A INTERGENIC HET SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN892-S.SNP.11:17950829 chr11:017950829 0 W/17950829-17950829 FN892-S Single Base Substitution A-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN892-S.SNP.11:17950832 chr11:017950832 0 W/17950832-17950832 FN892-S Single Base Substitution A-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN892-S.SNP.11:17950833 chr11:017950833 0 W/17950833-17950833 FN892-S Single Base Substitution C-T INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2160-S.SNP.11:17957926 chr11:017957926 0 W/17957926-17957926 FN2160-S SNP C -> A AC=1;AN=168;BQB=0.513731;DP=3184;DP4=1235,1901,21,15;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0370603;MQB=0.00524529;MQSB=0.00934924;RPB=0.88135;SGB=-48.0427;VDB=0.413627;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.11:17960685 chr11:017960685 0 W/17960685-17960685 FN2661-S SNP C -> T AC=1;AN=200;BQB=0.998309;DP=5140;DP4=2476,2381,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.52481e-06;MQSB=0.88103;RPB=0.264662;SGB=22.2439;VDB=0.254481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R342H|390|LOC_Os11g30850|protein_coding|CODING|LOC_Os11g30850.1|2|1) FN3782-S.SNP.11:17966460 chr11:017966460 0 W/17966460-17966460 FN3782-S SNP G -> T AC=1;AN=190;BQB=0.456241;DP=2893;DP4=1192,1609,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.6781e-10;MQSB=0.894553;RPB=0.93301;SGB=50.3161;VDB=0.607133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3782-S.SNP.11:17966461 chr11:017966461 0 W/17966461-17966461 FN3782-S SNP C -> T AC=1;AN=190;BQB=0.935429;DP=2899;DP4=1183,1603,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.24267e-10;MQSB=0.854791;RPB=0.253433;SGB=71.8647;VDB=0.291595;EFF=INTERGENIC(MODIFIER||||||||||1) FN267-S.SNP.11:17971517 chr11:017971517 0 W/17971517-17971517 FN267-S Single Base Substitution G-C INTERGENIC HET SNo: 266, Mutant_ID: FN267-S, Generation: M2, Mutations: 42, Genes: 6, Seed availability: Yes. FN2116-S.SNP.11:17979154 chr11:017979154 0 W/17979154-17979154 FN2116-S SNP T -> C AC=2;AN=166;BQB=0.967769;DP=3513;DP4=2015,1426,33,18;HOB=0.0238061;ICB=0.494049;MQ=49;MQ0F=0;MQB=3.7485e-29;MQSB=0.924532;RPB=0.0639316;SGB=-56.5804;VDB=0.021511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3771-S.SNP.11:17981091 chr11:017981091 0 W/17981091-17981091 FN3771-S SNP G -> T AC=2;AN=190;BQB=0.0241029;DP=3573;DP4=1819,1582,14,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.80043e-07;MQSB=0.801473;RPB=0.992273;SGB=82.301;VDB=0.0842365;EFF=INTERGENIC(MODIFIER||||||||||1) FN4080-S.SNP.11:17986129 chr11:017986129 0 W/17986129-17986129 FN4080-S SNP C -> A AC=1;AN=182;BQB=0.399787;DP=2778;DP4=1247,1427,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.30837e-06;MQSB=0.0357233;RPB=0.626907;SGB=20.6332;VDB=0.453798;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaA|D373E|395|LOC_Os11g30910|protein_coding|CODING|LOC_Os11g30910.1|1|1) FN3449-S.SNP.11:17995827 chr11:017995827 0 W/17995827-17995827 FN3449-S SNP C -> A AC=1;AN=184;BQB=0.928514;DP=2696;DP4=1224,1398,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54283e-09;MQSB=0.700857;RPB=0.962316;SGB=62.3078;VDB=0.604541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G260V|374|LOC_Os11g30930|protein_coding|CODING|LOC_Os11g30930.1|2|1) FN_N1-202-3.SNP.11:18003794 chr11:018003794 0 W/18003794-18003794 FN_N1-202-3 Single Base Substitution C-T HET SNo: 1390, Mutant_ID: FN_N1-202-3, Generation: M3, Mutations: 53, Genes: 12, Seed availability: Yes. FN2271-S.SNP.11:18007605 chr11:018007605 0 W/18007605-18007605 FN2271-S SNP A -> G AC=1;AN=188;BQB=0.446888;DP=5075;DP4=2258,2444,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00866995;MQB=2.32325e-05;MQSB=0.00536629;RPB=0.863873;SGB=-35.4322;VDB=0.0464209;EFF=INTERGENIC(MODIFIER||||||||||1) FN1300-S.SNP.11:18008933 chr11:018008933 0 W/18008933-18008933 FN1300-S Single Base Substitution T-C INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3871-S.SNP.11:18009691 chr11:018009691 0 W/18009691-18009691 FN3871-S SNP T -> C AC=1;AN=158;BQB=0.999847;DP=2507;DP4=1062,1348,8,16;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.04954e-11;MQSB=0.94862;RPB=0.800336;SGB=71.1374;VDB=0.160409;EFF=INTERGENIC(MODIFIER||||||||||1) FN4087-S.SNP.11:18013157 chr11:018013157 0 W/18013157-18013157 FN4087-S SNP C -> T AC=1;AN=182;BQB=0.994352;DP=2855;DP4=1436,1327,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.13149e-08;MQSB=0.892225;RPB=0.739851;SGB=57.644;VDB=0.874637;EFF=INTRON(MODIFIER||||991|LOC_Os11g30960|protein_coding|CODING|LOC_Os11g30960.1|4|1) FN545-S.SNP.11:18014611 chr11:018014611 0 W/18014611-18014611 FN545-S Single Base Substitution G-A INTRON HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN2677-S.SNP.11:18015074 chr11:018015074 0 W/18015074-18015074 FN2677-S SNP C -> T AC=1;AN=200;BQB=0.707307;DP=4932;DP4=2408,2284,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000405515;MQB=2.56895e-12;MQSB=0.621826;RPB=0.0422049;SGB=69.1109;VDB=0.0126606;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V344I|991|LOC_Os11g30960|protein_coding|CODING|LOC_Os11g30960.1|3|1) FN1420-S.SNP.11:18018852 chr11:018018852 0 W/18018852-18018852 FN1420-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g30970 retrotransposon protein, putative, unclassified, expressed SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN2235-S.SNP.11:18020406 chr11:018020406 0 W/18020406-18020406 FN2235-S SNP G -> A AC=1;AN=188;BQB=0.0226169;DP=4595;DP4=2249,2048,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000435256;MQB=0.00166494;MQSB=0.968743;RPB=0.95797;SGB=21.1058;VDB=0.264071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R781H|885|LOC_Os11g30970|protein_coding|CODING|LOC_Os11g30970.1|6|1) FN3595-S.SNP.11:18020526 chr11:018020526 0 W/18020526-18020526 FN3595-S SNP C -> T AC=1;AN=190;BQB=0.918237;DP=3025;DP4=1546,1391,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.66065e-05;MQSB=0.79321;RPB=0.353839;SGB=30.8803;VDB=0.722624;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A821V|885|LOC_Os11g30970|protein_coding|CODING|LOC_Os11g30970.1|6|1) FN3828-S.SNP.11:18023455 chr11:018023455 0 W/18023455-18023455 FN3828-S SNP C -> A AC=1;AN=190;BQB=0.962495;DP=3210;DP4=1543,1576,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0124611;MQB=9.16845e-06;MQSB=0.961692;RPB=0.641219;SGB=41.5369;VDB=0.0834353;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V1317F|1361|LOC_Os11g30990|protein_coding|CODING|LOC_Os11g30990.1|5|1) FN1371-S.SNP.11:18023555 chr11:018023555 0 W/18023555-18023555 FN1371-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN551-S.SNP.11:18025916 chr11:018025916 0 W/18025916-18025916 FN551-S Single Base Substitution T-A STOP_GAINED HET LOC_Os11g30990 retrotransposon protein, putative, unclassified, expressed SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN1577-S.SNP.11:18034811 chr11:018034811 0 W/18034811-18034811 FN1577-S Single Base Substitution A-T INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN-258.SNP.11:18038040 chr11:018038040 0 W/18038040-18038040 FN-258 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3998-S.SNP.11:18038151 chr11:018038151 0 W/18038151-18038151 FN3998-S SNP G -> C AC=2;AN=168;BQB=0.922917;DP=2756;DP4=1532,1063,12,12;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0.00290276;MQB=2.9321e-10;MQSB=0.0111812;RPB=0.969324;SGB=72.4869;VDB=0.305996;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgG|R132|238|LOC_Os11g31010|protein_coding|CODING|LOC_Os11g31010.1|2|1) FN2295.SNP.11:18049723 chr11:018049723 0 W/18049723-18049723 FN2295 SNP G -> A AC=2;AN=192;BQB=0.750126;DP=5097;DP4=2356,2279,29,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.05453e-29;MQSB=0.834433;RPB=0.542161;SGB=8.3696;VDB=0.56101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2128-S.SNP.11:18051951 chr11:018051951 0 W/18051951-18051951 FN2128-S SNP G -> T AC=1;AN=166;BQB=5.08433e-06;DP=3743;DP4=2039,1637,36,14;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0.00213732;MQB=3.40002e-07;MQSB=0.9929;RPB=0.238505;SGB=-981.234;VDB=0.102518;EFF=INTERGENIC(MODIFIER||||||||||1) FN718-S.SNP.11:18056681 chr11:018056681 0 W/18056681-18056681 FN718-S Single Base Substitution G-A INTERGENIC HOMO SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN1031-S.SNP.11:18058099 chr11:018058099 0 W/18058099-18058099 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2782-S.SNP.11:18062055 chr11:018062055 0 W/18062055-18062055 FN2782-S SNP G -> C AC=1;AN=198;BQB=0.7776;DP=4239;DP4=1852,2080,7,23;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.05875e-15;MQSB=0.0547126;RPB=0.725842;SGB=28.4908;VDB=0.618799;EFF=INTERGENIC(MODIFIER||||||||||1) FN1082-S.SNP.11:18065542 chr11:018065542 0 W/18065542-18065542 FN1082-S Single Base Substitution G-C INTRON HET SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN3629-S.SNP.11:18069359 chr11:018069359 0 W/18069359-18069359 FN3629-S SNP C -> T AC=2;AN=190;BQB=0.711883;DP=1832;DP4=901,821,7,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.82517e-12;MQSB=0.994304;RPB=0.497103;SGB=90.0802;VDB=0.848931;EFF=INTERGENIC(MODIFIER||||||||||1) FN3431-S.SNP.11:18069673 chr11:018069673 0 W/18069673-18069673 FN3431-S SNP C -> T AC=2;AN=184;BQB=0.911721;DP=3415;DP4=1568,1705,11,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.07079e-10;MQSB=0.0552675;RPB=0.318207;SGB=40.9276;VDB=0.730216;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.11:18079249 chr11:018079249 0 W/18079249-18079249 FN2479 SNP T -> A AC=1;AN=200;BQB=0.381773;DP=4147;DP4=2554,1325,7,6;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.00315526;MQSB=1.32369e-07;RPB=0.795563;SGB=36.6644;VDB=0.390925;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.11:18084954 chr11:018084954 0 W/18084954-18084954 FN1549-S Single Base Substitution G-T INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN4234-S.SNP.11:18086187 chr11:018086187 0 W/18086187-18086187 FN4234-S SNP A -> G AC=1;AN=170;BQB=0.996187;DP=1958;DP4=1275,626,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.46428e-05;MQSB=0.999178;RPB=0.974802;SGB=30.1021;VDB=0.308129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.11:18092397 chr11:018092397 0 W/18092397-18092397 FN3800-S SNP A -> G AC=1;AN=190;BQB=0.750004;DP=2385;DP4=991,1336,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.91649e-08;MQSB=0.15543;RPB=0.306223;SGB=49.0954;VDB=0.265917;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.11:18092398 chr11:018092398 0 W/18092398-18092398 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.886293;DP=2382;DP4=863,1336,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.08751e-07;MQSB=0.523777;RPB=0.0411868;SGB=2.55724;VDB=0.225991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.11:18100105 chr11:018100105 0 W/18100105-18100105 FN2431 SNP A -> T AC=1;AN=200;BQB=0.830978;DP=5245;DP4=2440,2484,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57577e-08;MQSB=0.946502;RPB=0.988505;SGB=-14.9257;VDB=0.217395;EFF=INTRON(MODIFIER||||772|LOC_Os11g31100|protein_coding|CODING|LOC_Os11g31100.1|1|1) FN-258.SNP.11:18102220 chr11:018102220 0 W/18102220-18102220 FN-258 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g31100 gibberellin response modulator protein, putative, expressed SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3451-S.SNP.11:18103047 chr11:018103047 0 W/18103047-18103047 FN3451-S SNP A -> C AC=1;AN=184;BQB=0.935762;DP=3732;DP4=1528,2013,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.12026e-07;MQSB=0.983519;RPB=0.489108;SGB=44.2207;VDB=0.677213;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.11:18104603 chr11:018104603 0 W/18104603-18104603 FN1525-S Single Base Substitution T-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN3506-S.SNP.11:18104603 chr11:018104603 0 W/18104603-18104603 FN3506-S SNP T -> A AC=1;AN=188;BQB=0.998353;DP=2818;DP4=1365,1367,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.93098e-06;MQSB=0.937047;RPB=0.812061;SGB=28.8977;VDB=0.566421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.11:18113222 chr11:018113222 0 W/18113222-18113222 FN2536-S SNP A -> C AC=1;AN=198;BQB=0.571124;DP=3989;DP4=1685,1990,5,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.82299e-08;MQSB=0.883589;RPB=0.314558;SGB=2.96892;VDB=0.189882;EFF=INTERGENIC(MODIFIER||||||||||1) FN2631-S.SNP.11:18114580 chr11:018114580 0 W/18114580-18114580 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.787527;DP=4798;DP4=2161,2342,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.98252e-17;MQSB=0.930322;RPB=0.678595;SGB=118.737;VDB=0.919197;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R143*|158|LOC_Os11g31120|protein_coding|CODING|LOC_Os11g31120.1|3|1) FN1304-S.SNP.11:18115342 chr11:018115342 0 W/18115342-18115342 FN1304-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g31120 hypothetical protein SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN-226.SNP.11:18117372 chr11:018117372 0 W/18117372-18117372 FN-226 Single Base Substitution C-A INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1388-S.SNP.11:18121208 chr11:018121208 0 W/18121208-18121208 FN1388-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN2206-S.SNP.11:18121208 chr11:018121208 0 W/18121208-18121208 FN2206-S SNP C -> T AC=1;AN=188;BQB=0.98325;DP=4730;DP4=2117,2312,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000211416;MQB=1.79694e-13;MQSB=0.983326;RPB=0.897045;SGB=75.1932;VDB=0.0985667;EFF=INTERGENIC(MODIFIER||||||||||1) FN3751-S.SNP.11:18121208 chr11:018121208 0 W/18121208-18121208 FN3751-S SNP C -> T AC=2;AN=190;BQB=0.987186;DP=2579;DP4=1228,1230,14,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.15349e-15;MQSB=0.91557;RPB=0.063159;SGB=117.403;VDB=0.00408077;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.11:18125492 chr11:018125492 0 W/18125492-18125492 FN4071-S SNP G -> A AC=2;AN=182;BQB=0.928782;DP=2930;DP4=1647,1212,15,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.43624e-12;MQSB=0.661446;RPB=0.995257;SGB=102.753;VDB=0.0741831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.11:18125558 chr11:018125558 0 W/18125558-18125558 FN2242-S SNP A -> T AC=1;AN=188;BQB=0.557112;DP=4283;DP4=2338,1541,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.15565e-08;MQSB=0.57812;RPB=0.276474;SGB=7.21887;VDB=0.73004;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.11:18127686 chr11:018127686 0 W/18127686-18127686 FN792-S Single Base Substitution G-A INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN-147.SNP.11:18129101 chr11:018129101 0 W/18129101-18129101 FN-147 Single Base Substitution A-G INTRON HOMO SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN434-S.SNP.11:18130973 chr11:018130973 0 W/18130973-18130973 FN434-S Single Base Substitution C-T INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN2442.SNP.11:18132451 chr11:018132451 0 W/18132451-18132451 FN2442 SNP C -> T AC=1;AN=200;BQB=0.95285;DP=4712;DP4=2310,2073,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.38445e-09;MQSB=0.555914;RPB=0.965698;SGB=58.2954;VDB=0.326743;EFF=INTRON(MODIFIER||||50|LOC_Os11g31150|protein_coding|CODING|LOC_Os11g31150.1|1|1) FN537-S.SNP.11:18138096 chr11:018138096 0 W/18138096-18138096 FN537-S Single Base Substitution G-A INTERGENIC HOMO SNo: 533, Mutant_ID: FN537-S, Generation: M2, Mutations: 66, Genes: 83, Seed availability: Yes. FN-217.SNP.11:18139043 chr11:018139043 0 W/18139043-18139043 FN-217 Single Base Substitution G-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-238.SNP.11:18139043 chr11:018139043 0 W/18139043-18139043 FN-238 Single Base Substitution G-A INTERGENIC HOMO SNo: 237, Mutant_ID: FN-238, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-87.SNP.11:18139043 chr11:018139043 0 W/18139043-18139043 FN-87 Single Base Substitution G-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1719-S.SNP.11:18139043 chr11:018139043 0 W/18139043-18139043 FN1719-S SNP G -> A AC=1;AN=188;BQB=0.903252;DP=2514;DP4=1168,1307,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000167336;MQSB=0.987333;RPB=0.137771;SGB=-3.72151;VDB=0.405936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.11:18140355 chr11:018140355 0 W/18140355-18140355 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.993784;DP=4645;DP4=2452,1987,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.96156e-14;MQSB=0.926375;RPB=0.907036;SGB=76.3213;VDB=0.360777;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.11:18141529 chr11:018141529 0 W/18141529-18141529 FN4128-S SNP T -> G AC=1;AN=182;BQB=0.801261;DP=2636;DP4=1074,1472,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.53359e-06;MQSB=0.99019;RPB=0.205958;SGB=44.1115;VDB=0.0525418;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.11:18146449 chr11:018146449 0 W/18146449-18146449 FN3464-S SNP T -> C AC=2;AN=184;BQB=0.982179;DP=2722;DP4=1293,1312,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.96703e-16;MQSB=0.957027;RPB=0.140109;SGB=85.0529;VDB=0.288231;EFF=INTRON(MODIFIER||||469|LOC_Os11g31160|protein_coding|CODING|LOC_Os11g31160.1|3|1) FN2650-S.SNP.11:18149131 chr11:018149131 0 W/18149131-18149131 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.161398;DP=4183;DP4=1868,1763,6,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000478126;MQB=5.17596e-05;MQSB=2.8026e-45;RPB=0.924754;SGB=21.6694;VDB=0.733659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1119-S.SNP.11:18153523 chr11:018153523 0 W/18153523-18153523 FN1119-S Single Base Substitution T-C INTRON HET SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2223-S.SNP.11:18153964 chr11:018153964 0 W/18153964-18153964 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.116397;DP=5155;DP4=2556,2236,19,13;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0595538;MQB=0.00861817;MQSB=5.97776e-34;RPB=0.544692;SGB=-152.216;VDB=0.308765;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T805|855|LOC_Os11g31180|protein_coding|CODING|LOC_Os11g31180.1|6|1) FN4174-S.SNP.11:18160726 chr11:018160726 0 W/18160726-18160726 FN4174-S SNP C -> A AC=1;AN=170;BQB=0.886261;DP=1573;DP4=892,615,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.0635728;MQB=0.975268;MQSB=0;RPB=0.62353;SGB=24.5502;VDB=0.10087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:18164370 chr11:018164370 0 W/18164370-18164370 FN2337 SNP G -> A AC=1;AN=192;BQB=0.484345;DP=4032;DP4=1322,2407,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000496032;MQB=7.25953e-07;MQSB=0.3809;RPB=0.385746;SGB=-17.0261;VDB=0.288478;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.11:18164434 chr11:018164434 0 W/18164434-18164434 W470-2-1 Single Base Substitution A-G INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1340-S.SNP.11:18164729 chr11:018164729 0 W/18164729-18164729 FN1340-S Single Base Substitution T-C INTERGENIC HET SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. W246-5-1.SNP.11:18168616 chr11:018168616 0 W/18168616-18168616 W246-5-1 Single Base Substitution C-G INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2120-S.SNP.11:18176360 chr11:018176360 0 W/18176360-18176360 FN2120-S SNP C -> T AC=1;AN=168;BQB=0.52952;DP=3723;DP4=1520,2174,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.87802e-09;MQSB=0.995172;RPB=0.942376;SGB=-15.8033;VDB=0.897421;EFF=INTERGENIC(MODIFIER||||||||||1) FN629-S.SNP.11:18179113 chr11:018179113 0 W/18179113-18179113 FN629-S Single Base Substitution T-C INTERGENIC HOMO SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2667-S.SNP.11:18180309 chr11:018180309 0 W/18180309-18180309 FN2667-S SNP G -> T AC=1;AN=200;BQB=0.996856;DP=5012;DP4=2111,2560,10,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.80998e-19;MQSB=0.997489;RPB=0.904692;SGB=105.163;VDB=0.162006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3547-S.SNP.11:18183530 chr11:018183530 0 W/18183530-18183530 FN3547-S SNP G -> T AC=1;AN=188;BQB=0.973035;DP=3384;DP4=1696,1588,1,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.64385e-06;MQSB=0.923577;RPB=0.34801;SGB=35.3493;VDB=0.165195;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.11:18189678 chr11:018189678 0 W/18189678-18189678 FN1410-S Single Base Substitution G-A INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN723-S.SNP.11:18192471 chr11:018192471 0 W/18192471-18192471 FN723-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g31210 retrotransposon protein, putative, unclassified SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN723-S.SNP.11:18192472 chr11:018192472 0 W/18192472-18192472 FN723-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g31210 retrotransposon protein, putative, unclassified SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN476-S.SNP.11:18196213 chr11:018196213 0 W/18196213-18196213 FN476-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g31220 transposon protein, putative, unclassified, expressed SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1754-S.SNP.11:18197484 chr11:018197484 0 W/18197484-18197484 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.452891;DP=2785;DP4=1456,1298,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=24;MQ0F=0.379174;MQB=0.966922;MQSB=2.76632e-30;RPB=0.538911;SGB=15.903;VDB=0.961343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G91R|1385|LOC_Os11g31220|protein_coding|CODING|LOC_Os11g31220.1|3|1) FN2323.SNP.11:18197484 chr11:018197484 0 W/18197484-18197484 FN2323 SNP G -> A AC=2;AN=192;BQB=0.99554;DP=5399;DP4=2677,2415,28,20;HOB=0.0206163;ICB=0.494846;MQ=27;MQ0F=0.350065;MQB=0.487778;MQSB=2.9214e-06;RPB=0.285492;SGB=108.409;VDB=0.468001;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G91R|1385|LOC_Os11g31220|protein_coding|CODING|LOC_Os11g31220.1|3|1) FN1035-S.SNP.11:18202815 chr11:018202815 0 W/18202815-18202815 FN1035-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g31220 transposon protein, putative, unclassified, expressed SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN3366-S.SNP.11:18203607 chr11:018203607 0 W/18203607-18203607 FN3366-S SNP A -> G AC=2;AN=184;BQB=0.741229;DP=2541;DP4=1313,1116,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.68913e-18;MQSB=0.896733;RPB=0.843042;SGB=113.227;VDB=0.538916;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.11:18206368 chr11:018206368 0 W/18206368-18206368 FN553-S Single Base Substitution G-T INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3801-S.SNP.11:18206913 chr11:018206913 0 W/18206913-18206913 FN3801-S SNP T -> G AC=2;AN=190;BQB=0.848151;DP=2223;DP4=1190,877,6,8;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0031489;MQB=0.197305;MQSB=0.681767;RPB=0.992632;SGB=58.2031;VDB=0.712113;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.11:18208431 chr11:018208431 0 W/18208431-18208431 FN485-S Single Base Substitution G-A INTERGENIC HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3039-S.SNP.11:18223290 chr11:018223290 0 W/18223290-18223290 FN3039-S SNP G -> A AC=1;AN=184;BQB=0.953664;DP=3835;DP4=1670,2029,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=17;MQ0F=0.391395;MQB=0.0311464;MQSB=1.89113e-21;RPB=0.316173;SGB=28.3187;VDB=0.943402;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.11:18225159 chr11:018225159 0 W/18225159-18225159 FN632-S Single Base Substitution C-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN4036-S.SNP.11:18226126 chr11:018226126 0 W/18226126-18226126 FN4036-S SNP C -> A AC=2;AN=168;BQB=0.812897;DP=3164;DP4=1332,1693,23,12;HOB=0.0235261;ICB=0.494119;MQ=34;MQ0F=0.0998736;MQB=0.518016;MQSB=3.47854e-16;RPB=0.879931;SGB=-126.323;VDB=0.0104079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.11:18226398 chr11:018226398 0 W/18226398-18226398 FN1405-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1032-S.SNP.11:18229398 chr11:018229398 0 W/18229398-18229398 FN1032-S Single Base Substitution A-T INTRON HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1423-S.SNP.11:18233913 chr11:018233913 0 W/18233913-18233913 FN1423-S Single Base Substitution G-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2701-S.SNP.11:18239688 chr11:018239688 0 W/18239688-18239688 FN2701-S SNP C -> G AC=1;AN=200;BQB=0.964664;DP=5302;DP4=2891,2154,7,5;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=3.78604e-06;MQSB=0.311654;RPB=0.343327;SGB=33.0593;VDB=0.158054;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.11:18252742 chr11:018252742 0 W/18252742-18252742 FN-265 Single Base Substitution T-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3438-S.SNP.11:18255057 chr11:018255057 0 W/18255057-18255057 FN3438-S SNP C -> T AC=2;AN=184;BQB=0.875766;DP=2952;DP4=1373,1443,10,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.25328e-15;MQSB=0.957548;RPB=0.93693;SGB=95.6183;VDB=0.904177;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D170|1151|LOC_Os11g31300|protein_coding|CODING|LOC_Os11g31300.1|1|1) FN899-S.SNP.11:18258937 chr11:018258937 0 W/18258937-18258937 FN899-S Single Base Substitution T-G INTRON HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN1050-S.SNP.11:18258938 chr11:018258938 0 W/18258938-18258938 FN1050-S Single Base Substitution A-C INTRON HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2625-S.SNP.11:18260811 chr11:018260811 0 W/18260811-18260811 FN2625-S SNP C -> T AC=1;AN=200;BQB=0.0507661;DP=5011;DP4=2502,2197,13,11;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.82151e-08;MQSB=0.0421676;RPB=0.948001;SGB=47.7211;VDB=0.793155;EFF=INTRON(MODIFIER||||1151|LOC_Os11g31300|protein_coding|CODING|LOC_Os11g31300.1|7|1) FN3941-S.SNP.11:18265780 chr11:018265780 0 W/18265780-18265780 FN3941-S SNP G -> A AC=2;AN=168;BQB=0.809347;DP=2670;DP4=1305,1216,15,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.1902e-12;MQSB=0.92367;RPB=0.963524;SGB=109.773;VDB=0.271618;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.11:18266339 chr11:018266339 0 W/18266339-18266339 FN418-S Single Base Substitution A-G INTERGENIC HOMO SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN_N1-150-1.SNP.11:18268050 chr11:018268050 0 W/18268050-18268050 FN_N1-150-1 Single Base Substitution T-A Homo SNo: 1379, Mutant_ID: FN_N1-150-1, Generation: M3, Mutations: 63, Genes: 12, Seed availability: Yes. FN1053-S.SNP.11:18271881 chr11:018271881 0 W/18271881-18271881 FN1053-S Single Base Substitution G-A INTERGENIC HOMO SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN3835-S.SNP.11:18276082 chr11:018276082 0 W/18276082-18276082 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.976461;DP=2922;DP4=1378,1468,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000135747;MQSB=0.977151;RPB=0.918125;SGB=30.8803;VDB=0.85857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.11:18279132 chr11:018279132 0 W/18279132-18279132 FN2587-S SNP G -> A AC=1;AN=198;BQB=0.950254;DP=3216;DP4=1524,1497,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.1988e-09;MQSB=0.56728;RPB=0.997934;SGB=67.9293;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.11:18279133 chr11:018279133 0 W/18279133-18279133 FN2587-S SNP C -> A AC=1;AN=198;BQB=0.992416;DP=3211;DP4=1515,1506,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.56461e-10;MQSB=0.605641;RPB=0.982226;SGB=50.9344;VDB=0.265995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2298.SNP.11:18284911 chr11:018284911 0 W/18284911-18284911 FN2298 SNP G -> A AC=1;AN=192;BQB=0.983889;DP=5025;DP4=2340,2289,20,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199005;MQB=9.55417e-17;MQSB=0.952767;RPB=0.991371;SGB=-127.595;VDB=0.997992;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.11:18294066 chr11:018294066 0 W/18294066-18294066 FN-305 Single Base Substitution C-T INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3298-S.SNP.11:18298417 chr11:018298417 0 W/18298417-18298417 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.58845;DP=2872;DP4=1431,1348,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.49425e-07;MQSB=0.997242;RPB=0.986995;SGB=39.2697;VDB=0.643938;EFF=INTERGENIC(MODIFIER||||||||||1) FN3881-S.SNP.11:18303038 chr11:018303038 0 W/18303038-18303038 FN3881-S SNP C -> T AC=1;AN=158;BQB=0.7634;DP=2671;DP4=1463,1018,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.47648e-05;MQSB=0.994958;RPB=0.981461;SGB=7.23273;VDB=0.474469;EFF=INTRON(MODIFIER||||290|LOC_Os11g31360|protein_coding|CODING|LOC_Os11g31360.1|2|1) FN621-S.SNP.11:18303786 chr11:018303786 0 W/18303786-18303786 FN621-S Single Base Substitution G-T INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN3890-S.SNP.11:18307612 chr11:018307612 0 W/18307612-18307612 FN3890-S SNP G -> A AC=1;AN=158;BQB=0.75084;DP=2480;DP4=1301,1079,16,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.08047e-11;MQSB=0.996782;RPB=0.924462;SGB=95.131;VDB=0.431309;EFF=INTRON(MODIFIER||||126|LOC_Os11g31370|protein_coding|CODING|LOC_Os11g31370.1|2|1) FN4314-S.SNP.11:18308011 chr11:018308011 0 W/18308011-18308011 FN4314-S SNP A -> G AC=1;AN=170;BQB=0.960289;DP=2758;DP4=1093,1593,2,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.32067e-07;MQSB=0.874126;RPB=0.855638;SGB=14.9986;VDB=0.741545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T119A|126|LOC_Os11g31370|protein_coding|CODING|LOC_Os11g31370.1|4|1) FN3942-S.SNP.11:18310345 chr11:018310345 0 W/18310345-18310345 FN3942-S SNP A -> T AC=1;AN=168;BQB=0.70176;DP=2580;DP4=1270,1178,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.77732e-05;MQSB=0.946565;RPB=0.0869642;SGB=24.4556;VDB=0.219282;EFF=INTERGENIC(MODIFIER||||||||||1) FN742-S.SNP.11:18310426 chr11:018310426 0 W/18310426-18310426 FN742-S Single Base Substitution A-G INTERGENIC HET SNo: 666, Mutant_ID: FN742-S, Generation: M2, Mutations: 77, Genes: 40, Seed availability: Yes. FN-194.SNP.11:18311204 chr11:018311204 0 W/18311204-18311204 FN-194 Single Base Substitution T-C INTERGENIC HET SNo: 194, Mutant_ID: FN-194, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1117-S.SNP.11:18316577 chr11:018316577 0 W/18316577-18316577 FN1117-S Single Base Substitution G-T INTRON HET SNo: 989, Mutant_ID: FN1117-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3387-S.SNP.11:18318609 chr11:018318609 0 W/18318609-18318609 FN3387-S SNP C -> G AC=1;AN=184;BQB=0.833749;DP=3168;DP4=1534,1569,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.51311e-06;MQSB=0.995122;RPB=0.67379;SGB=35.7479;VDB=0.684686;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H261Q|314|LOC_Os11g31390|protein_coding|CODING|LOC_Os11g31390.1|2|1) FN-189.SNP.11:18323099 chr11:018323099 0 W/18323099-18323099 FN-189 Single Base Substitution C-A INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN-411.SNP.11:18327659 chr11:018327659 0 W/18327659-18327659 FN-411 Single Base Substitution T-C INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN-411.SNP.11:18327660 chr11:018327660 0 W/18327660-18327660 FN-411 Single Base Substitution A-T INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN1720-S.SNP.11:18327763 chr11:018327763 0 W/18327763-18327763 FN1720-S SNP G -> A AC=1;AN=188;BQB=0.00102505;DP=3939;DP4=1743,2161,12,16;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.13379;MQB=0.390941;MQSB=0.203293;RPB=0.673489;SGB=-203.708;VDB=0.707706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3691-S.SNP.11:18328663 chr11:018328663 0 W/18328663-18328663 FN3691-S SNP A -> G AC=2;AN=190;BQB=0.881995;DP=2800;DP4=1380,1299,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.67683e-12;MQSB=0.978627;RPB=0.326289;SGB=85.5263;VDB=0.293593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3773-S.SNP.11:18330163 chr11:018330163 0 W/18330163-18330163 FN3773-S SNP C -> G AC=1;AN=190;BQB=0.627926;DP=2643;DP4=1394,1184,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.1157e-05;MQSB=0.971179;RPB=0.808632;SGB=21.8853;VDB=0.3298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aCt|S947T|959|LOC_Os11g31410|protein_coding|CODING|LOC_Os11g31410.1|7|1) FN2711-S.SNP.11:18341428 chr11:018341428 0 W/18341428-18341428 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.498274;DP=4413;DP4=2114,2107,11,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.37565e-10;MQSB=0.764259;RPB=0.20863;SGB=81.8956;VDB=0.29002;EFF=INTRON(MODIFIER||||405|LOC_Os11g31420|protein_coding|CODING|LOC_Os11g31420.1|1|1) FN2204-S.SNP.11:18342894 chr11:018342894 0 W/18342894-18342894 FN2204-S SNP C -> G AC=1;AN=188;BQB=0.685108;DP=2840;DP4=1594,1037,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.34721e-08;MQSB=0.000475611;RPB=0.982051;SGB=53.8699;VDB=0.00229335;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.11:18344298 chr11:018344298 0 W/18344298-18344298 FN4172-S SNP G -> T AC=1;AN=170;BQB=0.977986;DP=2653;DP4=1126,1442,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=4.85177e-06;MQSB=0.00699072;RPB=0.989735;SGB=34.878;VDB=0.972316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1473-S.SNP.11:18344360 chr11:018344360 0 W/18344360-18344360 FN1473-S Single Base Substitution C-A INTERGENIC Homo SNo: 1239, Mutant_ID: FN1473-S, Generation: M2, Mutations: 76, Genes: 26, Seed availability: Yes. FN4182-S.SNP.11:18357609 chr11:018357609 0 W/18357609-18357609 FN4182-S SNP G -> A AC=1;AN=170;BQB=0.822792;DP=2215;DP4=881,1292,4,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000762129;MQSB=0.911681;RPB=0.992899;SGB=25.6601;VDB=0.626747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E742K|1100|LOC_Os11g31430|protein_coding|CODING|LOC_Os11g31430.1|12|1),SPLICE_SITE_REGION(LOW||||1100|LOC_Os11g31430|protein_coding|CODING|LOC_Os11g31430.1|12|1) FN3819-S.SNP.11:18363192 chr11:018363192 0 W/18363192-18363192 FN3819-S SNP T -> A AC=1;AN=190;BQB=0.790129;DP=2887;DP4=1337,1345,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.61547e-11;MQSB=0.429829;RPB=0.946109;SGB=-13.222;VDB=0.915042;EFF=INTRON(MODIFIER||||1100|LOC_Os11g31430|protein_coding|CODING|LOC_Os11g31430.1|24|1) FN2622-S.SNP.11:18365627 chr11:018365627 0 W/18365627-18365627 FN2622-S SNP A -> G AC=2;AN=200;BQB=0.33738;DP=4951;DP4=2321,2362,27,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.29911e-30;MQSB=0.761341;RPB=0.79072;SGB=72.0916;VDB=0.866727;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.11:18365634 chr11:018365634 0 W/18365634-18365634 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN1239-S.SNP.11:18366980 chr11:018366980 0 W/18366980-18366980 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN4083-S.SNP.11:18367004 chr11:018367004 0 W/18367004-18367004 FN4083-S SNP G -> T AC=1;AN=182;BQB=0.988302;DP=2841;DP4=1396,1359,12,23;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.82624e-19;MQSB=0.993933;RPB=0.943169;SGB=152.372;VDB=0.831464;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.11:18373054 chr11:018373054 0 W/18373054-18373054 FN1295-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2404.SNP.11:18374316 chr11:018374316 0 W/18374316-18374316 FN2404 SNP A -> G AC=1;AN=200;BQB=0.934649;DP=4703;DP4=2148,2330,12,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.24634e-17;MQSB=0.866807;RPB=0.30827;SGB=146.368;VDB=0.0592607;EFF=INTRON(MODIFIER||||409|LOC_Os11g31450|protein_coding|CODING|LOC_Os11g31450.1|5|1) FN1032-S.SNP.11:18379100 chr11:018379100 0 W/18379100-18379100 FN1032-S Single Base Substitution G-C INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1332-S.SNP.11:18382309 chr11:018382309 0 W/18382309-18382309 FN1332-S Single Base Substitution C-A UTR_5_PRIME HOMO SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN-144.SNP.11:18390261 chr11:018390261 0 W/18390261-18390261 FN-144 Single Base Substitution C-T UTR_3_PRIME HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-334.SNP.11:18398403 chr11:018398403 0 W/18398403-18398403 FN-334 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3287-S.SNP.11:18402057 chr11:018402057 0 W/18402057-18402057 FN3287-S SNP A -> T AC=1;AN=184;BQB=0.95897;DP=5320;DP4=3298,1758,18,10;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0806391;MQB=0.751799;MQSB=0;RPB=0.989856;SGB=-41.4907;VDB=0.241115;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y258N|700|LOC_Os11g31490|protein_coding|CODING|LOC_Os11g31490.1|1|1) FN2279-S.SNP.11:18408479 chr11:018408479 0 W/18408479-18408479 FN2279-S SNP G -> A AC=1;AN=190;BQB=0.980156;DP=4453;DP4=2297,1877,20,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.90366e-18;MQSB=0.25977;RPB=0.589162;SGB=144.727;VDB=0.400049;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.11:18408862 chr11:018408862 0 W/18408862-18408862 W278-3-1 Single Base Substitution A-G INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1089-S.SNP.11:18415974 chr11:018415974 0 W/18415974-18415974 FN1089-S Single Base Substitution A-G INTRON HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN4189-S.SNP.11:18417572 chr11:018417572 0 W/18417572-18417572 FN4189-S SNP G -> T AC=1;AN=170;BQB=0.993229;DP=2563;DP4=1292,1219,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0948108;MQB=0.506247;MQSB=0;RPB=0.726735;SGB=52.3148;VDB=0.971763;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L176F|409|LOC_Os11g31510|protein_coding|CODING|LOC_Os11g31510.1|1|1) FN551-S.SNP.11:18419593 chr11:018419593 0 W/18419593-18419593 FN551-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g31520 transposon protein, putative, Pong sub-class, expressed SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3513-S.SNP.11:18423313 chr11:018423313 0 W/18423313-18423313 FN3513-S SNP G -> A AC=1;AN=188;BQB=0.589217;DP=3029;DP4=1417,1552,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.74285e-05;MQSB=0.964034;RPB=0.610715;SGB=26.2637;VDB=0.996932;EFF=INTERGENIC(MODIFIER||||||||||1) FN-141.SNP.11:18427034 chr11:018427034 0 W/18427034-18427034 FN-141 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN709-S.SNP.11:18434826 chr11:018434826 0 W/18434826-18434826 FN709-S Single Base Substitution T-A INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN709-S.SNP.11:18434827 chr11:018434827 0 W/18434827-18434827 FN709-S Single Base Substitution T-A INTERGENIC HET SNo: 638, Mutant_ID: FN709-S, Generation: M2, Mutations: 55, Genes: 46, Seed availability: Yes. FN1760-S.SNP.11:18439047 chr11:018439047 0 W/18439047-18439047 FN1760-S SNP G -> C AC=1;AN=188;BQB=0.134104;DP=3734;DP4=1695,1984,21,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.47731e-14;MQSB=0.943732;RPB=0.998788;SGB=-428.172;VDB=0.535671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.11:18441046 chr11:018441046 0 W/18441046-18441046 FN2450 SNP T -> C AC=1;AN=200;BQB=0.644975;DP=4788;DP4=2154,2359,6,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000395836;MQSB=0.670685;RPB=0.998916;SGB=29.4541;VDB=0.39833;EFF=INTERGENIC(MODIFIER||||||||||1) FN3322-S.SNP.11:18442319 chr11:018442319 0 W/18442319-18442319 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.936836;DP=3666;DP4=1689,1865,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.79667e-09;MQSB=0.993666;RPB=0.990429;SGB=25.7969;VDB=0.686055;EFF=INTERGENIC(MODIFIER||||||||||1) FN2437.SNP.11:18444672 chr11:018444672 0 W/18444672-18444672 FN2437 SNP A -> G AC=2;AN=200;BQB=0.731652;DP=4259;DP4=2025,1914,32,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.32285e-26;MQSB=0.792276;RPB=0.929589;SGB=62.4605;VDB=0.00196593;EFF=SPLICE_SITE_REGION(LOW||||251|LOC_Os11g31560|protein_coding|CODING|LOC_Os11g31560.1|3|1),INTRON(MODIFIER||||251|LOC_Os11g31560|protein_coding|CODING|LOC_Os11g31560.1|3|1) FN2279-S.SNP.11:18456697 chr11:018456697 0 W/18456697-18456697 FN2279-S SNP T -> G AC=1;AN=190;BQB=0.930209;DP=4763;DP4=2008,2338,25,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.11156e-19;MQSB=0.441599;RPB=0.654845;SGB=36.7425;VDB=0.721668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.11:18461806 chr11:018461806 0 W/18461806-18461806 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.695518;DP=4657;DP4=1979,2294,4,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.68197e-08;MQSB=0.898845;RPB=0.603076;SGB=68.0801;VDB=0.0405784;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.11:18467624 chr11:018467624 0 W/18467624-18467624 FN3467-S SNP C -> T AC=2;AN=184;BQB=0.924078;DP=2396;DP4=1054,1228,14,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.30287e-16;MQSB=0.658123;RPB=0.803712;SGB=121.091;VDB=0.0583747;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.11:18480417 chr11:018480417 0 W/18480417-18480417 FN-165 Single Base Substitution T-C INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN2529-S.SNP.11:18481903 chr11:018481903 0 W/18481903-18481903 FN2529-S SNP C -> T AC=2;AN=198;BQB=0.965503;DP=3991;DP4=1952,1827,10,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.71991e-12;MQSB=0.507744;RPB=0.374332;SGB=65.3149;VDB=0.932365;EFF=INTERGENIC(MODIFIER||||||||||1) FN-252.SNP.11:18482803 chr11:018482803 0 W/18482803-18482803 FN-252 Single Base Substitution G-A INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2559-S.SNP.11:18501052 chr11:018501052 0 W/18501052-18501052 FN2559-S SNP G -> A AC=2;AN=198;BQB=0.710004;DP=3893;DP4=1959,1750,12,5;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.76678e-11;MQSB=0.972978;RPB=0.807838;SGB=72.5245;VDB=0.580683;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.11:18507141 chr11:018507141 0 W/18507141-18507141 FN754-S Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3528-S.SNP.11:18526552 chr11:018526552 0 W/18526552-18526552 FN3528-S SNP A -> T AC=1;AN=188;BQB=0.530839;DP=2709;DP4=1222,1422,3,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.0018457;MQB=2.7237e-06;MQSB=0.964335;RPB=0.983804;SGB=67.1521;VDB=0.853356;EFF=INTRON(MODIFIER||||1533|LOC_Os11g31680|protein_coding|CODING|LOC_Os11g31680.1|22|1) FN3881-S.SNP.11:18527822 chr11:018527822 0 W/18527822-18527822 FN3881-S SNP A -> C AC=1;AN=158;BQB=0.991024;DP=2630;DP4=1256,1293,2,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.10248e-06;MQSB=0.833239;RPB=0.946334;SGB=27.3346;VDB=0.381414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cGg|L1148R|1533|LOC_Os11g31680|protein_coding|CODING|LOC_Os11g31680.1|19|1) FN1501-S.SNP.11:18530086 chr11:018530086 0 W/18530086-18530086 FN1501-S Single Base Substitution A-T NON_SYNONYMOUS_CODING Homo LOC_Os11g31680 retrotransposon protein, putative, unclassified, expressed SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN413-S.SNP.11:18540657 chr11:018540657 0 W/18540657-18540657 FN413-S Single Base Substitution T-C INTRON HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN1555-S.SNP.11:18542035 chr11:018542035 0 W/18542035-18542035 FN1555-S Single Base Substitution G-A INTERGENIC Homo SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN360-S.SNP.11:18543042 chr11:018543042 0 W/18543042-18543042 FN360-S Single Base Substitution C-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN4125-S.SNP.11:18546914 chr11:018546914 0 W/18546914-18546914 FN4125-S SNP T -> C AC=2;AN=182;BQB=0.958141;DP=2646;DP4=1106,1475,12,5;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.93952e-10;MQSB=0.98213;RPB=0.358006;SGB=71.1765;VDB=0.237846;EFF=INTRON(MODIFIER||||375|LOC_Os11g31690|protein_coding|CODING|LOC_Os11g31690.1|4|1),INTRON(MODIFIER||||375|LOC_Os11g31690|protein_coding|CODING|LOC_Os11g31690.2|4|1) FN3858-S.SNP.11:18548986 chr11:018548986 0 W/18548986-18548986 FN3858-S SNP T -> C AC=1;AN=158;BQB=0.953847;DP=2319;DP4=1111,1075,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33984e-06;MQSB=0.997103;RPB=0.924993;SGB=23.9652;VDB=0.508631;EFF=INTRON(MODIFIER||||375|LOC_Os11g31690|protein_coding|CODING|LOC_Os11g31690.1|1|1),INTRON(MODIFIER||||375|LOC_Os11g31690|protein_coding|CODING|LOC_Os11g31690.2|1|1) FN626-S.SNP.11:18554193 chr11:018554193 0 W/18554193-18554193 FN626-S Single Base Substitution G-A INTRON HET SNo: 591, Mutant_ID: FN626-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN3378-S.SNP.11:18560633 chr11:018560633 0 W/18560633-18560633 FN3378-S SNP G -> A AC=1;AN=184;BQB=0.473391;DP=2097;DP4=1124,881,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.32568e-06;MQSB=0.657142;RPB=0.425384;SGB=-0.806606;VDB=0.431004;EFF=INTRON(MODIFIER||||611|LOC_Os11g31705|protein_coding|CODING|LOC_Os11g31705.1|15|1) FN-208.SNP.11:18567274 chr11:018567274 0 W/18567274-18567274 FN-208 Single Base Substitution G-A INTRON HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-80.SNP.11:18572080 chr11:018572080 0 W/18572080-18572080 FN-80 Single Base Substitution A-C INTERGENIC HET SNo: 80, Mutant_ID: FN-80, Generation: M2, Mutations: 37, Genes: 31, Seed availability: Yes. FN3914-S.SNP.11:18573315 chr11:018573315 0 W/18573315-18573315 FN3914-S SNP G -> A AC=1;AN=158;BQB=0.842285;DP=2621;DP4=1369,1086,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.91724e-07;MQSB=0.99307;RPB=0.262629;SGB=42.6978;VDB=0.206417;EFF=INTERGENIC(MODIFIER||||||||||1) FN2684-S.SNP.11:18573528 chr11:018573528 0 W/18573528-18573528 FN2684-S SNP C -> G AC=1;AN=200;BQB=0.946861;DP=5022;DP4=2408,2371,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.37803e-12;MQSB=0.981074;RPB=0.999615;SGB=95.7111;VDB=0.593901;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.11:18575961 chr11:018575961 0 W/18575961-18575961 FN541-S Single Base Substitution A-C INTERGENIC HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1602-S.SNP.11:18576864 chr11:018576864 0 W/18576864-18576864 FN1602-S Single Base Substitution G-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN3811-S.SNP.11:18581271 chr11:018581271 0 W/18581271-18581271 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.489055;DP=2984;DP4=1454,1435,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00402145;MQB=1.6349e-09;MQSB=0.948195;RPB=0.352609;SGB=33.8752;VDB=0.249712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.11:18587230 chr11:018587230 0 W/18587230-18587230 FN2602-S SNP C -> T AC=1;AN=198;BQB=0.728776;DP=3865;DP4=1881,1780,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.40257e-09;MQSB=0.9924;RPB=0.643668;SGB=40.149;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.11:18589469 chr11:018589469 0 W/18589469-18589469 FN1537-S Single Base Substitution C-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN2379.SNP.11:18592274 chr11:018592274 0 W/18592274-18592274 FN2379 SNP T -> G AC=1;AN=192;BQB=0.936629;DP=4709;DP4=2428,2021,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.93958e-09;MQSB=0.899456;RPB=0.774164;SGB=7.3548;VDB=0.712522;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.11:18594117 chr11:018594117 0 W/18594117-18594117 FN3390-S SNP A -> G AC=1;AN=184;BQB=0.977469;DP=2781;DP4=1381,1259,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.03858e-06;MQSB=0.996397;RPB=0.995947;SGB=15.7097;VDB=0.83435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.11:18597147 chr11:018597147 0 W/18597147-18597147 FN1124-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g31720 retrotransposon protein, putative, unclassified, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3937-S.SNP.11:18601882 chr11:018601882 0 W/18601882-18601882 FN3937-S SNP A -> T AC=1;AN=158;BQB=0.980924;DP=2249;DP4=982,1154,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00222321;MQB=0.038788;MQSB=0.132278;RPB=0.9663;SGB=47.0672;VDB=0.830975;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F7I|1508|LOC_Os11g31720|protein_coding|CODING|LOC_Os11g31720.1|1|1) FN630-S.SNP.11:18602620 chr11:018602620 0 W/18602620-18602620 FN630-S Single Base Substitution C-T INTERGENIC HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN3283-S.SNP.11:18604245 chr11:018604245 0 W/18604245-18604245 FN3283-S SNP G -> A AC=1;AN=184;BQB=0.402345;DP=2030;DP4=1111,767,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.0810102;MQSB=0.238099;RPB=0.813581;SGB=35.1773;VDB=0.985724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.11:18611516 chr11:018611516 0 W/18611516-18611516 FN2315 SNP T -> C AC=1;AN=192;BQB=0.797582;DP=5398;DP4=2437,2542,32,40;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.31286e-40;MQSB=0.783631;RPB=0.827376;SGB=93.394;VDB=0.61726;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.11:18614223 chr11:018614223 0 W/18614223-18614223 FN971-S Single Base Substitution G-A INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN778-S.SNP.11:18616749 chr11:018616749 0 W/18616749-18616749 FN778-S Single Base Substitution C-T INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN767-S.SNP.11:18617062 chr11:018617062 0 W/18617062-18617062 FN767-S Single Base Substitution C-T INTERGENIC HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN1675-S.SNP.11:18617774 chr11:018617774 0 W/18617774-18617774 FN1675-S SNP G -> T AC=2;AN=188;BQB=0.860271;DP=3417;DP4=1524,1851,17,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.51281e-16;MQSB=0.940808;RPB=0.548721;SGB=112.585;VDB=0.408127;EFF=INTERGENIC(MODIFIER||||||||||1) FN1512-S.SNP.11:18622476 chr11:018622476 0 W/18622476-18622476 FN1512-S Single Base Substitution C-G INTERGENIC HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN1508-S.SNP.11:18627248 chr11:018627248 0 W/18627248-18627248 FN1508-S Single Base Substitution A-T INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN931-S.SNP.11:18628094 chr11:018628094 0 W/18628094-18628094 FN931-S Single Base Substitution G-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2260-S.SNP.11:18629334 chr11:018629334 0 W/18629334-18629334 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.860193;DP=4679;DP4=2540,1847,16,6;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0188074;MQB=0.00214799;MQSB=0;RPB=0.792474;SGB=68.0854;VDB=0.518682;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T1427|1584|LOC_Os11g31760|protein_coding|CODING|LOC_Os11g31760.1|9|1) FN2696-S.SNP.11:18635179 chr11:018635179 0 W/18635179-18635179 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.610076;DP=4520;DP4=1936,2300,9,13;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00951327;MQB=0.0841772;MQSB=0;RPB=0.904308;SGB=42.5108;VDB=0.78447;EFF=INTRON(MODIFIER||||1584|LOC_Os11g31760|protein_coding|CODING|LOC_Os11g31760.1|1|1) FN2630-S.SNP.11:18635819 chr11:018635819 0 W/18635819-18635819 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.0561619;DP=4264;DP4=1808,2161,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1202e-08;MQSB=0.0745666;RPB=0.97659;SGB=91.1059;VDB=0.511266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.11:18636220 chr11:018636220 0 W/18636220-18636220 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.065054;DP=3722;DP4=1792,1764,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.62457e-07;MQSB=0.922845;RPB=0.837238;SGB=1.37381;VDB=0.151085;EFF=INTERGENIC(MODIFIER||||||||||1) FN3715-S.SNP.11:18639097 chr11:018639097 0 W/18639097-18639097 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.928632;DP=2803;DP4=1414,1237,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.37923e-10;MQSB=0.99129;RPB=0.0570864;SGB=57.4238;VDB=0.223472;EFF=INTRON(MODIFIER||||977|LOC_Os11g31770|protein_coding|CODING|LOC_Os11g31770.1|6|1),INTRON(MODIFIER||||764|LOC_Os11g31770|protein_coding|CODING|LOC_Os11g31770.2|6|1),INTRON(MODIFIER||||925|LOC_Os11g31770|protein_coding|CODING|LOC_Os11g31770.3|6|1) FN455-S.SNP.11:18644782 chr11:018644782 0 W/18644782-18644782 FN455-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN455-S.SNP.11:18644787 chr11:018644787 0 W/18644787-18644787 FN455-S Single Base Substitution A-C UTR_3_PRIME HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN2612-S.SNP.11:18660902 chr11:018660902 0 W/18660902-18660902 FN2612-S SNP T -> A AC=1;AN=198;BQB=0.743272;DP=3808;DP4=1750,1737,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.85347e-13;MQSB=1;RPB=0.849873;SGB=17.325;VDB=0.610728;EFF=INTERGENIC(MODIFIER||||||||||1) FN930-S.SNP.11:18663779 chr11:018663779 0 W/18663779-18663779 FN930-S Single Base Substitution G-A INTRON HET SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN2124-S.SNP.11:18667803 chr11:018667803 0 W/18667803-18667803 FN2124-S SNP C -> G AC=2;AN=168;BQB=0.670333;DP=3144;DP4=1817,1264,31,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.59298e-28;MQSB=0.65701;RPB=0.999879;SGB=-226.424;VDB=0.129825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.11:18668756 chr11:018668756 0 W/18668756-18668756 FN2230-S SNP T -> A AC=1;AN=190;BQB=0.946204;DP=4910;DP4=2258,2432,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20789e-13;MQSB=0.676751;RPB=0.256482;SGB=68.0854;VDB=0.112637;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.11:18673958 chr11:018673958 0 W/18673958-18673958 FN810-S Single Base Substitution A-C INTERGENIC HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN835-S.SNP.11:18680744 chr11:018680744 0 W/18680744-18680744 FN835-S Single Base Substitution C-T INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN2204-S.SNP.11:18680745 chr11:018680745 0 W/18680745-18680745 FN2204-S SNP C -> T AC=1;AN=190;BQB=0.748555;DP=4937;DP4=2271,2323,19,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.39428e-13;MQSB=0.911576;RPB=0.66982;SGB=-41.2318;VDB=0.609782;EFF=INTERGENIC(MODIFIER||||||||||1) FN2688-S.SNP.11:18688138 chr11:018688138 0 W/18688138-18688138 FN2688-S SNP C -> T AC=2;AN=200;BQB=0.787075;DP=4718;DP4=1976,2458,12,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.13117e-17;MQSB=0.959918;RPB=0.888096;SGB=118.737;VDB=0.892425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.11:18688235 chr11:018688235 0 W/18688235-18688235 FN1254-S Single Base Substitution G-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN3057-S.SNP.11:18689387 chr11:018689387 0 W/18689387-18689387 FN3057-S SNP G -> T AC=2;AN=184;BQB=0.999974;DP=3034;DP4=1466,1446,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.59812e-13;MQSB=0.996891;RPB=0.174927;SGB=40.9276;VDB=0.882682;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.11:18693052 chr11:018693052 0 W/18693052-18693052 FN941-S Single Base Substitution T-A INTRON HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3653-S.SNP.11:18696631 chr11:018696631 0 W/18696631-18696631 FN3653-S SNP C -> A AC=1;AN=190;BQB=0.968803;DP=2857;DP4=1539,1239,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.33528e-05;MQSB=0.999995;RPB=0.368326;SGB=30.8803;VDB=0.229708;EFF=SPLICE_SITE_REGION(LOW||||965|LOC_Os11g31820|protein_coding|CODING|LOC_Os11g31820.1|14|1),INTRON(MODIFIER||||965|LOC_Os11g31820|protein_coding|CODING|LOC_Os11g31820.1|14|1) FN3834-S.SNP.11:18707645 chr11:018707645 0 W/18707645-18707645 FN3834-S SNP T -> G AC=2;AN=190;BQB=0.940446;DP=2209;DP4=1095,1032,9,11;HOB=0.020831;ICB=0.494793;MQ=28;MQ0F=0.107741;MQB=0.704418;MQSB=0.657952;RPB=0.571394;SGB=60.9777;VDB=0.769078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gCa|E208A|799|LOC_Os11g31830|protein_coding|CODING|LOC_Os11g31830.1|3|1) FN3523-S.SNP.11:18716104 chr11:018716104 0 W/18716104-18716104 FN3523-S SNP A -> G AC=1;AN=188;BQB=0.917852;DP=2712;DP4=1135,1499,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.63927e-05;MQSB=0.157429;RPB=0.752404;SGB=30.8063;VDB=0.15523;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T1318A|1336|LOC_Os11g31840|protein_coding|CODING|LOC_Os11g31840.1|3|1) FN1610-S.SNP.11:18720893 chr11:018720893 0 W/18720893-18720893 FN1610-S Single Base Substitution T-C INTERGENIC HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. 703-4.SNP.11:18724129 chr11:018724129 0 W/18724129-18724129 703-4 Single Base Substitution C-G SYNONYMOUS_CODING Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN2232-S.SNP.11:18726726 chr11:018726726 0 W/18726726-18726726 FN2232-S SNP G -> A AC=1;AN=190;BQB=0.089446;DP=3958;DP4=2119,1596,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.79349e-07;MQSB=0.992845;RPB=0.938669;SGB=50.3161;VDB=0.470013;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.11:18727637 chr11:018727637 0 W/18727637-18727637 FN3436-S SNP C -> T AC=2;AN=184;BQB=0.995479;DP=3029;DP4=1525,1410,20,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.5525e-21;MQSB=0.672632;RPB=0.447072;SGB=157.265;VDB=0.465898;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T275|402|LOC_Os11g31870|protein_coding|CODING|LOC_Os11g31870.1|1|1) FN1424-S.SNP.11:18731003 chr11:018731003 0 W/18731003-18731003 FN1424-S Single Base Substitution G-A INTRON HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN590-S.SNP.11:18741258 chr11:018741258 0 W/18741258-18741258 FN590-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN590-S.SNP.11:18741259 chr11:018741259 0 W/18741259-18741259 FN590-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN590-S.SNP.11:18741260 chr11:018741260 0 W/18741260-18741260 FN590-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1433-S.SNP.11:18746024 chr11:018746024 0 W/18746024-18746024 FN1433-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2234-S.SNP.11:18749273 chr11:018749273 0 W/18749273-18749273 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.993857;DP=3943;DP4=1657,2072,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000254291;MQSB=0.00852616;RPB=0.547024;SGB=-5.21201;VDB=0.064148;EFF=INTERGENIC(MODIFIER||||||||||1) FN-303.SNP.11:18754414 chr11:018754414 0 W/18754414-18754414 FN-303 Single Base Substitution C-G INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN2161-S.SNP.11:18755744 chr11:018755744 0 W/18755744-18755744 FN2161-S SNP C -> A AC=1;AN=168;BQB=0.00182539;DP=2702;DP4=1222,1445,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0340489;MQB=0.661444;MQSB=0.025456;RPB=0.297617;SGB=-17.0958;VDB=0.871028;EFF=START_GAINED(LOW||||1048|LOC_Os11g31910|protein_coding|CODING|LOC_Os11g31910.1|1|1),UTR_5_PRIME(MODIFIER||56||1048|LOC_Os11g31910|protein_coding|CODING|LOC_Os11g31910.1|1|1) FN_N1-169-1.SNP.11:18758259 chr11:018758259 0 W/18758259-18758259 FN_N1-169-1 Single Base Substitution G-C HET LOC_Os11g31910 retrotransposon protein, putative, unclassified, expressed SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN2262-S.SNP.11:18758358 chr11:018758358 0 W/18758358-18758358 FN2262-S SNP C -> T AC=1;AN=190;BQB=0.977672;DP=3708;DP4=1512,1738,7,17;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00458468;MQB=4.06075e-11;MQSB=0.215251;RPB=0.893876;SGB=103.742;VDB=0.0590055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R802W|1048|LOC_Os11g31910|protein_coding|CODING|LOC_Os11g31910.1|3|1) FN3676-S.SNP.11:18758366 chr11:018758366 0 W/18758366-18758366 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.962315;DP=2052;DP4=860,1068,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00389864;MQB=0.00307092;MQSB=0.408328;RPB=0.875323;SGB=26.3271;VDB=0.971974;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A804|1048|LOC_Os11g31910|protein_coding|CODING|LOC_Os11g31910.1|3|1) FN3851-S.SNP.11:18758519 chr11:018758519 0 W/18758519-18758519 FN3851-S SNP G -> A AC=1;AN=158;BQB=0.846362;DP=2365;DP4=1243,1015,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.57552e-06;MQSB=0.42803;RPB=0.105007;SGB=42.6978;VDB=0.127221;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A855|1048|LOC_Os11g31910|protein_coding|CODING|LOC_Os11g31910.1|3|1) FN2201-S.SNP.11:18765161 chr11:018765161 0 W/18765161-18765161 FN2201-S SNP G -> A AC=2;AN=190;BQB=0.986699;DP=4231;DP4=2040,1807,20,14;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0444339;MQB=0.943203;MQSB=6.36668e-37;RPB=0.999961;SGB=110.732;VDB=0.660713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P235L|1986|LOC_Os11g31920|protein_coding|CODING|LOC_Os11g31920.1|1|1) FN_546-3-1.SNP.11:18766216 chr11:018766216 0 W/18766216-18766216 FN_546-3-1 Single Base Substitution C-T Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2462.SNP.11:18767699 chr11:018767699 0 W/18767699-18767699 FN2462 SNP C -> T AC=2;AN=200;BQB=0.00372245;DP=4793;DP4=2445,2062,24,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.79925e-24;MQSB=0.856883;RPB=0.934908;SGB=102.43;VDB=0.884018;EFF=INTERGENIC(MODIFIER||||||||||1) FN4098-S.SNP.11:18769371 chr11:018769371 0 W/18769371-18769371 FN4098-S SNP T -> C AC=1;AN=182;BQB=0.932907;DP=2999;DP4=1320,1555,2,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.26992e-07;MQSB=0.994003;RPB=0.755838;SGB=39.6007;VDB=0.801834;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.11:18778658 chr11:018778658 0 W/18778658-18778658 FN2461 SNP G -> T AC=2;AN=200;BQB=0.782512;DP=4362;DP4=2173,1808,21,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.05531e-19;MQSB=0.993603;RPB=0.596299;SGB=-0.401659;VDB=0.994145;EFF=INTRON(MODIFIER||||582|LOC_Os11g31950|protein_coding|CODING|LOC_Os11g31950.1|1|1) FN1506-S.SNP.11:18780010 chr11:018780010 0 W/18780010-18780010 FN1506-S Single Base Substitution A-G INTRON HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1027-S.SNP.11:18792327 chr11:018792327 0 W/18792327-18792327 FN1027-S Single Base Substitution G-A INTERGENIC HET SNo: 923, Mutant_ID: FN1027-S, Generation: M2, Mutations: 79, Genes: 81, Seed availability: No. FN2531-S.SNP.11:18801668 chr11:018801668 0 W/18801668-18801668 FN2531-S SNP G -> A AC=1;AN=198;BQB=0.994263;DP=3855;DP4=1742,1940,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00337224;MQB=1.93513e-10;MQSB=0.978255;RPB=0.729089;SGB=77.1196;VDB=0.635772;EFF=INTERGENIC(MODIFIER||||||||||1) FN1727-S.SNP.11:18804232 chr11:018804232 0 W/18804232-18804232 FN1727-S SNP G -> A AC=2;AN=188;BQB=0.997027;DP=3915;DP4=2005,1847,28,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=7.08822e-17;MQSB=0.709125;RPB=0.835303;SGB=-50.609;VDB=0.619547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.11:18807208 chr11:018807208 0 W/18807208-18807208 FN2780-S SNP G -> T AC=1;AN=198;BQB=0.464798;DP=4389;DP4=2121,2006,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.30822e-09;MQSB=0.770827;RPB=0.0458504;SGB=21.559;VDB=0.616855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.11:18810787 chr11:018810787 0 W/18810787-18810787 FN2698-S SNP C -> G AC=1;AN=200;BQB=0.840435;DP=5054;DP4=2518,2241,20,30;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43131e-28;MQSB=0.975118;RPB=0.590709;SGB=170.056;VDB=0.823701;EFF=INTERGENIC(MODIFIER||||||||||1) FN881-S.SNP.11:18816108 chr11:018816108 0 W/18816108-18816108 FN881-S Single Base Substitution C-A INTERGENIC HET SNo: 787, Mutant_ID: FN881-S, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3807-S.SNP.11:18820322 chr11:018820322 0 W/18820322-18820322 FN3807-S SNP G -> A AC=1;AN=190;BQB=0.8884;DP=2065;DP4=1115,856,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.56707e-06;MQSB=0.579505;RPB=0.380321;SGB=35.4339;VDB=0.121227;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.11:18826875 chr11:018826875 0 W/18826875-18826875 FN2408 SNP G -> A AC=1;AN=200;BQB=0.68418;DP=3578;DP4=2437,775,17,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.3865e-07;MQSB=1.4527e-08;RPB=0.346613;SGB=32.0901;VDB=0.257391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.11:18829140 chr11:018829140 0 W/18829140-18829140 FN1307-S Single Base Substitution C-A INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1079-S.SNP.11:18833588 chr11:018833588 0 W/18833588-18833588 FN1079-S Single Base Substitution A-G INTRON HOMO SNo: 964, Mutant_ID: FN1079-S, Generation: M2, Mutations: 50, Genes: 10, Seed availability: Yes. FN3615-S.SNP.11:18834205 chr11:018834205 0 W/18834205-18834205 FN3615-S SNP T -> A AC=1;AN=190;BQB=0.466471;DP=2883;DP4=1345,1435,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.96763e-09;MQSB=0.961484;RPB=0.927761;SGB=80.9724;VDB=0.915042;EFF=INTRON(MODIFIER||||472|LOC_Os11g31980|protein_coding|CODING|LOC_Os11g31980.1|7|1) FN1309-S.SNP.11:18836550 chr11:018836550 0 W/18836550-18836550 FN1309-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1515-S.SNP.11:18836550 chr11:018836550 0 W/18836550-18836550 FN1515-S Single Base Substitution C-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2157-S.SNP.11:18836550 chr11:018836550 0 W/18836550-18836550 FN2157-S SNP C -> T AC=2;AN=168;BQB=0.228954;DP=3149;DP4=1686,1212,22,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.4834e-14;MQSB=0.712722;RPB=0.738571;SGB=-7.187;VDB=0.840301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.11:18836550 chr11:018836550 0 W/18836550-18836550 FN3872-S SNP C -> T AC=2;AN=158;BQB=0.947175;DP=2332;DP4=1174,954,9,17;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.43793e-13;MQSB=0.972705;RPB=0.940405;SGB=77.8763;VDB=0.807635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.11:18836550 chr11:018836550 0 W/18836550-18836550 FN3971-S SNP C -> T AC=1;AN=168;BQB=0.916873;DP=2486;DP4=1256,1056,1,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.00032e-05;MQSB=0.396377;RPB=0.622853;SGB=17.5943;VDB=0.140097;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.11:18836817 chr11:018836817 0 W/18836817-18836817 FN2177-S SNP A -> G AC=1;AN=168;BQB=1.91276e-05;DP=3442;DP4=1639,1772,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.34658e-06;MQSB=0.903869;RPB=0.92062;SGB=9.91396;VDB=0.395713;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.11:18837111 chr11:018837111 0 W/18837111-18837111 FN3796-S SNP T -> C AC=2;AN=190;BQB=0.938282;DP=2754;DP4=1442,1207,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.85687e-14;MQSB=0.936547;RPB=0.97038;SGB=75.1932;VDB=0.854665;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.11:18838096 chr11:018838096 0 W/18838096-18838096 FN1297-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN-156.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN1014-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN1014-S Single Base Substitution G-A INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1122-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN1122-S Single Base Substitution G-A INTERGENIC HOMO SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1202-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN1202-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1317-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN1317-S Single Base Substitution G-A INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN2492.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN2492 SNP G -> A AC=1;AN=200;BQB=0.361076;DP=3835;DP4=1772,1790,1,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.226e-06;MQSB=0.0222266;RPB=0.970219;SGB=33.0593;VDB=0.850567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN3057-S SNP G -> A AC=2;AN=184;BQB=0.946687;DP=3071;DP4=1644,1308,11,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.29482e-11;MQSB=0.980615;RPB=0.678659;SGB=35.884;VDB=0.356761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.999563;DP=3135;DP4=1763,1257,15,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.62158e-13;MQSB=0.89385;RPB=0.962034;SGB=108.042;VDB=0.662381;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN3785-S SNP G -> A AC=2;AN=190;BQB=0.983216;DP=2822;DP4=1460,1238,7,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.06401e-09;MQSB=0.981065;RPB=0.597251;SGB=67.3108;VDB=0.0899844;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN3994-S SNP G -> A AC=2;AN=168;BQB=0.756756;DP=2264;DP4=1095,1042,10,5;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.54721e-06;MQSB=0.916021;RPB=0.440702;SGB=61.0344;VDB=0.749699;EFF=INTERGENIC(MODIFIER||||||||||1) FN4173-S.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN4173-S SNP G -> A AC=2;AN=170;BQB=0.999852;DP=2287;DP4=1186,1014,3,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.92727e-07;MQSB=0.839344;RPB=0.992038;SGB=47.8722;VDB=0.138584;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.11:18838613 chr11:018838613 0 W/18838613-18838613 FN_822-5-1 Single Base Substitution G-A Homo SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1606-S.SNP.11:18840209 chr11:018840209 0 W/18840209-18840209 FN1606-S Single Base Substitution A-C INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2742-S.SNP.11:18840625 chr11:018840625 0 W/18840625-18840625 FN2742-S SNP A -> G AC=1;AN=200;BQB=0.721269;DP=4836;DP4=2132,2516,13,11;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00971878;MQB=0.00973149;MQSB=0.659528;RPB=0.800733;SGB=104.921;VDB=0.23019;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.11:18841562 chr11:018841562 0 W/18841562-18841562 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN838-S.SNP.11:18844027 chr11:018844027 0 W/18844027-18844027 FN838-S Single Base Substitution G-T INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN1039-S.SNP.11:18844228 chr11:018844228 0 W/18844228-18844228 FN1039-S Single Base Substitution C-T INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1217-S.SNP.11:18849139 chr11:018849139 0 W/18849139-18849139 FN1217-S Single Base Substitution C-A INTRON HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1520-S.SNP.11:18849627 chr11:018849627 0 W/18849627-18849627 FN1520-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g31990 retrotransposon protein, putative, unclassified, expressed SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2160-S.SNP.11:18850397 chr11:018850397 0 W/18850397-18850397 FN2160-S SNP G -> A AC=2;AN=168;BQB=0.792229;DP=2759;DP4=1482,1219,17,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00036245;MQB=3.17848e-16;MQSB=0.994405;RPB=0.722723;SGB=79.3486;VDB=0.158277;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q799|1567|LOC_Os11g31990|protein_coding|CODING|LOC_Os11g31990.1|5|1) 705-2.SNP.11:18852313 chr11:018852313 0 W/18852313-18852313 705-2 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os11g31990 retrotransposon protein, putative, unclassified, expressed SNo: 1462, Mutant_ID: 705-2, Generation: M2, Mutations: 38, Genes: 11, Seed availability: Yes. FN1433-S.SNP.11:18856777 chr11:018856777 0 W/18856777-18856777 FN1433-S Single Base Substitution T-C INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN2651-S.SNP.11:18860758 chr11:018860758 0 W/18860758-18860758 FN2651-S SNP C -> A AC=1;AN=200;BQB=0.912173;DP=4567;DP4=1928,2398,15,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218962;MQB=2.19239e-20;MQSB=0.952393;RPB=0.0150573;SGB=155.578;VDB=0.0628909;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.11:18863094 chr11:018863094 0 W/18863094-18863094 FN3628-S SNP C -> T AC=2;AN=190;BQB=0.880618;DP=2787;DP4=1472,1215,10,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.74118e-10;MQSB=0.990379;RPB=0.857569;SGB=85.5263;VDB=0.134688;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.11:18865564 chr11:018865564 0 W/18865564-18865564 FN1056-S Single Base Substitution C-T INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3393-S.SNP.11:18865578 chr11:018865578 0 W/18865578-18865578 FN3393-S SNP G -> A AC=2;AN=184;BQB=0.62285;DP=1424;DP4=386,995,3,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.04541e-05;MQSB=0.67501;RPB=0.832205;SGB=35.1773;VDB=0.418469;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.11:18865579 chr11:018865579 0 W/18865579-18865579 FN3393-S SNP T -> G AC=2;AN=184;BQB=0.981161;DP=1420;DP4=382,983,2,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.02908e-06;MQSB=0.738059;RPB=0.906127;SGB=10.6662;VDB=0.643503;EFF=INTERGENIC(MODIFIER||||||||||1) FN4189-S.SNP.11:18873839 chr11:018873839 0 W/18873839-18873839 FN4189-S SNP G -> A AC=1;AN=170;BQB=0.543845;DP=2067;DP4=1041,942,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00158274;MQSB=0.665411;RPB=0.718185;SGB=10.1134;VDB=0.237602;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.11:18876977 chr11:018876977 0 W/18876977-18876977 FN1217-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN429-S.SNP.11:18877542 chr11:018877542 0 W/18877542-18877542 FN429-S Single Base Substitution G-A INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2232-S.SNP.11:18878803 chr11:018878803 0 W/18878803-18878803 FN2232-S SNP G -> T AC=1;AN=190;BQB=0.341516;DP=4662;DP4=2221,2162,19,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24063e-13;MQSB=0.996253;RPB=0.577816;SGB=24.3115;VDB=0.753674;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.11:18884154 chr11:018884154 0 W/18884154-18884154 FN2092-S SNP G -> C AC=1;AN=168;BQB=0.499507;DP=3115;DP4=1789,1282,18,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.38564e-12;MQSB=0.970139;RPB=0.978684;SGB=-42.3508;VDB=0.0369825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2265-S.SNP.11:18885269 chr11:018885269 0 W/18885269-18885269 FN2265-S SNP A -> G AC=1;AN=190;BQB=0.994922;DP=4650;DP4=2330,1872,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000215054;MQB=6.90157e-15;MQSB=0.997995;RPB=0.898088;SGB=25.8654;VDB=0.756044;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.11:18887432 chr11:018887432 0 W/18887432-18887432 FN-121 Single Base Substitution A-G INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN2437.SNP.11:18887527 chr11:018887527 0 W/18887527-18887527 FN2437 SNP G -> A AC=2;AN=200;BQB=0.999995;DP=4381;DP4=1871,2230,18,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.06221e-26;MQSB=0.830854;RPB=0.79659;SGB=206.235;VDB=0.957999;EFF=INTRON(MODIFIER||||151|LOC_Os11g32050|protein_coding|CODING|LOC_Os11g32050.1|1|1) FN2495.SNP.11:18893833 chr11:018893833 0 W/18893833-18893833 FN2495 SNP A -> T AC=1;AN=200;BQB=0.863686;DP=4145;DP4=1966,1957,5,5;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00434258;MQB=0.000364588;MQSB=0.134735;RPB=0.685753;SGB=25.849;VDB=0.594064;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.11:18895139 chr11:018895139 0 W/18895139-18895139 FN3407-S SNP C -> T AC=2;AN=184;BQB=0.925426;DP=2089;DP4=1025,964,8,6;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.87227e-05;MQSB=0.0619677;RPB=0.30017;SGB=57.786;VDB=0.13869;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.11:18895663 chr11:018895663 0 W/18895663-18895663 FN2711-S SNP C -> T AC=1;AN=200;BQB=0.112466;DP=4662;DP4=2187,2179,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.95912e-07;MQSB=0.629958;RPB=0.778757;SGB=-83.3055;VDB=0.69496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.11:18906562 chr11:018906562 0 W/18906562-18906562 FN2268-S SNP A -> G AC=1;AN=190;BQB=0.461514;DP=5316;DP4=2520,2514,13,21;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.27928e-19;MQSB=0.95337;RPB=0.183976;SGB=33.6348;VDB=0.0988893;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.11:18907331 chr11:018907331 0 W/18907331-18907331 FN677-S Single Base Substitution A-T INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN1554-S.SNP.11:18907426 chr11:018907426 0 W/18907426-18907426 FN1554-S Single Base Substitution C-T INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN1646-S.SNP.11:18913826 chr11:018913826 0 W/18913826-18913826 FN1646-S Single Base Substitution A-T INTERGENIC HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN389-S.SNP.11:18916858 chr11:018916858 0 W/18916858-18916858 FN389-S Single Base Substitution T-C INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2655-S.SNP.11:18918682 chr11:018918682 0 W/18918682-18918682 FN2655-S SNP C -> A AC=1;AN=200;BQB=0.988004;DP=4408;DP4=1915,2166,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.36351e-12;MQSB=0.863288;RPB=0.114887;SGB=39.9056;VDB=0.690119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1577-S.SNP.11:18926774 chr11:018926774 0 W/18926774-18926774 FN1577-S Single Base Substitution A-G INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4119-S.SNP.11:18929270 chr11:018929270 0 W/18929270-18929270 FN4119-S SNP G -> T AC=1;AN=182;BQB=0.888553;DP=2539;DP4=1196,1299,2,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.17874e-05;MQSB=0.959717;RPB=0.40361;SGB=35.0899;VDB=0.00946171;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.11:18932539 chr11:018932539 0 W/18932539-18932539 FN737-S Single Base Substitution T-A INTERGENIC HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN4119-S.SNP.11:18932854 chr11:018932854 0 W/18932854-18932854 FN4119-S SNP T -> A AC=1;AN=182;BQB=0.54027;DP=2999;DP4=1742,1190,10,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.76275e-07;MQSB=0.869005;RPB=0.68033;SGB=42.6494;VDB=0.138575;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.11:18944388 chr11:018944388 0 W/18944388-18944388 FN1509-S Single Base Substitution A-C INTERGENIC Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1559-S.SNP.11:18944413 chr11:018944413 0 W/18944413-18944413 FN1559-S Single Base Substitution G-A INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN3626-S.SNP.11:18945820 chr11:018945820 0 W/18945820-18945820 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.705613;DP=2676;DP4=1727,855,15,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.22497e-11;MQSB=0.928579;RPB=0.857339;SGB=31.3213;VDB=0.408018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1568-S.SNP.11:18949700 chr11:018949700 0 W/18949700-18949700 FN1568-S Single Base Substitution T-C INTERGENIC Homo SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN1698-S.SNP.11:18949767 chr11:018949767 0 W/18949767-18949767 FN1698-S SNP C -> A AC=2;AN=188;BQB=0.970656;DP=3926;DP4=2006,1874,24,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.91001e-20;MQSB=0.912917;RPB=0.846334;SGB=76.9421;VDB=0.905477;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.11:18950872 chr11:018950872 0 W/18950872-18950872 FN512-S Single Base Substitution A-T INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN512-S.SNP.11:18950873 chr11:018950873 0 W/18950873-18950873 FN512-S Single Base Substitution T-A INTERGENIC HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN3714-S.SNP.11:18978244 chr11:018978244 0 W/18978244-18978244 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.941615;DP=2968;DP4=1454,1361,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.66987e-12;MQSB=0.399833;RPB=0.916865;SGB=103.742;VDB=0.355496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.11:18978760 chr11:018978760 0 W/18978760-18978760 FN2415 SNP G -> C AC=1;AN=200;BQB=0.988558;DP=4632;DP4=2295,2042,8,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=7.5362e-10;MQSB=0.24826;RPB=0.936986;SGB=37.3004;VDB=0.360248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.11:18980858 chr11:018980858 0 W/18980858-18980858 FN2753-S SNP T -> A AC=1;AN=200;BQB=0.820132;DP=4674;DP4=2210,2219,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.72785e-15;MQSB=0.999495;RPB=0.720703;SGB=83.5316;VDB=0.0147234;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.11:18984778 chr11:018984778 0 W/18984778-18984778 FN4119-S SNP T -> C AC=1;AN=182;BQB=0.998818;DP=2412;DP4=1298,1054,2,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.74469e-05;MQSB=0.986799;RPB=0.63076;SGB=26.0691;VDB=0.700305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F116L|275|LOC_Os11g32160|protein_coding|CODING|LOC_Os11g32160.1|5|1) FN1667-S.SNP.11:19027786 chr11:019027786 0 W/19027786-19027786 FN1667-S SNP T -> C AC=2;AN=188;BQB=0.887418;DP=4128;DP4=1913,2152,29,25;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.000968992;MQB=6.06106e-19;MQSB=0.000122018;RPB=0.895538;SGB=-111.43;VDB=0.513786;EFF=SPLICE_SITE_REGION(LOW||||1386|LOC_Os11g32210|protein_coding|CODING|LOC_Os11g32210.1|1|1),INTRON(MODIFIER||||1386|LOC_Os11g32210|protein_coding|CODING|LOC_Os11g32210.1|1|1) FN2474.SNP.11:19029334 chr11:019029334 0 W/19029334-19029334 FN2474 SNP C -> T AC=1;AN=200;BQB=0.188315;DP=3470;DP4=1794,1402,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.04151e-08;MQSB=0.227087;RPB=0.381904;SGB=40.2696;VDB=0.189211;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K19|1386|LOC_Os11g32210|protein_coding|CODING|LOC_Os11g32210.1|1|1) FN4111-S.SNP.11:19034996 chr11:019034996 0 W/19034996-19034996 FN4111-S SNP A -> T AC=1;AN=182;BQB=0.835676;DP=2773;DP4=1514,1174,17,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.11596e-16;MQSB=0.457859;RPB=0.518549;SGB=23.2799;VDB=0.494266;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.11:19039340 chr11:019039340 0 W/19039340-19039340 FN891-S Single Base Substitution C-G INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN-34.SNP.11:19041145 chr11:019041145 0 W/19041145-19041145 FN-34 Single Base Substitution A-T INTERGENIC Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN-399.SNP.11:19053843 chr11:019053843 0 W/19053843-19053843 FN-399 Single Base Substitution C-T INTERGENIC HET SNo: 384, Mutant_ID: FN-399, Generation: M2, Mutations: 51, Genes: 39, Seed availability: Yes. FN399-S.SNP.11:19053843 chr11:019053843 0 W/19053843-19053843 FN399-S Single Base Substitution C-T INTERGENIC HET SNo: 385, Mutant_ID: FN399-S, Generation: M2, Mutations: 61, Genes: 12, Seed availability: Yes. FN-393.SNP.11:19054589 chr11:019054589 0 W/19054589-19054589 FN-393 Single Base Substitution G-A INTERGENIC HET SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN631-S.SNP.11:19055235 chr11:019055235 0 W/19055235-19055235 FN631-S Single Base Substitution G-A INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2441.SNP.11:19055260 chr11:019055260 0 W/19055260-19055260 FN2441 SNP G -> A AC=2;AN=200;BQB=0.259435;DP=1909;DP4=1738,23,31,1;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.89449e-19;MQSB=0.999996;RPB=0.989437;SGB=136.508;VDB=0.299993;EFF=INTERGENIC(MODIFIER||||||||||1) FN1270-S.SNP.11:19056214 chr11:019056214 0 W/19056214-19056214 FN1270-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g32250 expressed protein SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3948-S.SNP.11:19058067 chr11:019058067 0 W/19058067-19058067 FN3948-S SNP T -> A AC=2;AN=168;BQB=0.882469;DP=3000;DP4=1429,1438,25,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.95784e-20;MQSB=0.137094;RPB=0.981296;SGB=193.959;VDB=0.322676;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.11:19058277 chr11:019058277 0 W/19058277-19058277 FN404-S Single Base Substitution G-A INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3903-S.SNP.11:19066439 chr11:019066439 0 W/19066439-19066439 FN3903-S SNP A -> G AC=1;AN=158;BQB=0.977626;DP=2358;DP4=1105,1186,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.53431e-06;MQSB=0.99976;RPB=0.35018;SGB=20.5959;VDB=0.0816964;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A904|1020|LOC_Os11g32260|protein_coding|CODING|LOC_Os11g32260.1|26|1),SYNONYMOUS_CODING(LOW|SILENT|gcA/gcG|A902|1018|LOC_Os11g32260|protein_coding|CODING|LOC_Os11g32260.2|26|1) FN2366.SNP.11:19068321 chr11:019068321 0 W/19068321-19068321 FN2366 SNP A -> G AC=2;AN=192;BQB=0.588945;DP=5241;DP4=2387,2552,25,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.17324e-30;MQSB=0.810219;RPB=0.578789;SGB=178.79;VDB=0.131144;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.11:19070510 chr11:019070510 0 W/19070510-19070510 FN3358-S SNP T -> C AC=1;AN=184;BQB=0.925887;DP=2914;DP4=1262,1544,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45619e-08;MQSB=0.991141;RPB=0.828498;SGB=0.715177;VDB=0.39866;EFF=INTRON(MODIFIER||||661|LOC_Os11g32270|protein_coding|CODING|LOC_Os11g32270.1|1|1),INTRON(MODIFIER||||462|LOC_Os11g32270|protein_coding|CODING|LOC_Os11g32270.2|1|1) FN984-S.SNP.11:19077148 chr11:019077148 0 W/19077148-19077148 FN984-S Single Base Substitution C-A INTRON HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN801-S.SNP.11:19078402 chr11:019078402 0 W/19078402-19078402 FN801-S Single Base Substitution G-A INTRON HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN4158-S.SNP.11:19084537 chr11:019084537 0 W/19084537-19084537 FN4158-S SNP T -> C AC=1;AN=170;BQB=0.906594;DP=2554;DP4=1345,1114,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.51708e-06;MQSB=0.981923;RPB=0.408336;SGB=21.1076;VDB=0.507605;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.11:19085033 chr11:019085033 0 W/19085033-19085033 FN2095-S SNP G -> A AC=1;AN=168;BQB=0.999987;DP=3363;DP4=1377,1935,10,22;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.44154e-14;MQSB=0.91818;RPB=0.262402;SGB=-45.7659;VDB=0.0426463;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.11:19086600 chr11:019086600 0 W/19086600-19086600 FN1022-S Single Base Substitution G-A INTRON HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3826-S.SNP.11:19089059 chr11:019089059 0 W/19089059-19089059 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.752793;DP=3228;DP4=1305,1828,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00101383;MQSB=0.309438;RPB=0.432306;SGB=35.4339;VDB=0.308844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.11:19089793 chr11:019089793 0 W/19089793-19089793 FN1152-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN2328.SNP.11:19098131 chr11:019098131 0 W/19098131-19098131 FN2328 SNP T -> C AC=1;AN=192;BQB=0.931353;DP=5185;DP4=2290,2571,28,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.04832e-24;MQSB=0.988224;RPB=0.960329;SGB=95.587;VDB=0.739942;EFF=INTRON(MODIFIER||||138|LOC_Os11g32330|protein_coding|CODING|LOC_Os11g32330.1|2|1) FN2328.SNP.11:19098140 chr11:019098140 0 W/19098140-19098140 FN2328 SNP G -> T AC=1;AN=192;BQB=0.980522;DP=5092;DP4=2324,2510,27,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.65245e-26;MQSB=0.99782;RPB=0.470711;SGB=1.03308;VDB=0.292739;EFF=INTRON(MODIFIER||||138|LOC_Os11g32330|protein_coding|CODING|LOC_Os11g32330.1|2|1) FN3516-S.SNP.11:19103246 chr11:019103246 0 W/19103246-19103246 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.949581;DP=2626;DP4=1275,1265,11,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.08259e-12;MQSB=0.992795;RPB=0.901963;SGB=64.3306;VDB=0.480572;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.11:19107047 chr11:019107047 0 W/19107047-19107047 W721-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3363-S.SNP.11:19108003 chr11:019108003 0 W/19108003-19108003 FN3363-S SNP G -> A AC=1;AN=184;BQB=0.994057;DP=3546;DP4=2113,1327,13,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.25569e-11;MQSB=0.981007;RPB=0.999605;SGB=80.3949;VDB=0.0496011;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.11:19124991 chr11:019124991 0 W/19124991-19124991 FN1104-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g32369 expressed protein SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN3967-S.SNP.11:19129115 chr11:019129115 0 W/19129115-19129115 FN3967-S SNP A -> T AC=1;AN=182;BQB=0.956423;DP=2840;DP4=1504,1262,11,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000352113;MQB=6.47199e-13;MQSB=0.987162;RPB=0.555533;SGB=84.7091;VDB=0.720699;EFF=INTRON(MODIFIER||||114|LOC_Os11g32390|protein_coding|CODING|LOC_Os11g32390.1|3|1) FN3896-S.SNP.11:19140242 chr11:019140242 0 W/19140242-19140242 FN3896-S SNP C -> T AC=1;AN=158;BQB=0.999506;DP=2857;DP4=1380,1368,11,9;HOB=8.01154e-05;ICB=0.000161245;MQ=36;MQ0F=0.0896045;MQB=0.491832;MQSB=0.00434603;RPB=0.186927;SGB=82.0227;VDB=0.0656537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R642W|1581|LOC_Os11g32420|protein_coding|CODING|LOC_Os11g32420.1|2|1) FN879-S.SNP.11:19140242 chr11:019140242 0 W/19140242-19140242 FN879-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g32420 transposon protein, putative, unclassified, expressed SNo: 785, Mutant_ID: FN879-S, Generation: M2, Mutations: 58, Genes: 22, Seed availability: Yes. FN2212-S.SNP.11:19143134 chr11:019143134 0 W/19143134-19143134 FN2212-S SNP C -> G AC=1;AN=190;BQB=0.923828;DP=5701;DP4=2669,2492,8,20;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.108227;MQB=0.76974;MQSB=0;RPB=0.605278;SGB=89.4087;VDB=0.235218;EFF=INTRON(MODIFIER||||1581|LOC_Os11g32420|protein_coding|CODING|LOC_Os11g32420.1|7|1) FN2305.SNP.11:19157822 chr11:019157822 0 W/19157822-19157822 FN2305 SNP G -> A AC=2;AN=192;BQB=0.308581;DP=4632;DP4=2341,2032,27,18;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000863558;MQB=1.08184e-23;MQSB=0.85926;RPB=0.266575;SGB=150.275;VDB=0.0232364;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.11:19158733 chr11:019158733 0 W/19158733-19158733 FN3840-S SNP G -> A AC=2;AN=190;BQB=0.959792;DP=2793;DP4=1105,1575,10,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.49599e-16;MQSB=0.595115;RPB=0.967748;SGB=103.624;VDB=0.998101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.11:19162602 chr11:019162602 0 W/19162602-19162602 FN1520-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os11g32460 expressed protein SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1545-S.SNP.11:19163408 chr11:019163408 0 W/19163408-19163408 FN1545-S Single Base Substitution T-C INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2374.SNP.11:19172323 chr11:019172323 0 W/19172323-19172323 FN2374 SNP A -> G AC=1;AN=192;BQB=0.745617;DP=5074;DP4=2437,2170,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197083;MQB=4.08554e-11;MQSB=0.998835;RPB=0.980376;SGB=-103.238;VDB=0.396488;EFF=UTR_3_PRIME(MODIFIER||499||1032|LOC_Os11g32470|protein_coding|CODING|LOC_Os11g32470.1|6|1) FN-228.SNP.11:19175080 chr11:019175080 0 W/19175080-19175080 FN-228 Single Base Substitution T-C INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2451.SNP.11:19185878 chr11:019185878 0 W/19185878-19185878 FN2451 SNP T -> C AC=1;AN=200;BQB=0.811029;DP=4946;DP4=2632,1988,22,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78039e-21;MQSB=0.926887;RPB=0.89904;SGB=84.1935;VDB=0.8568;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.11:19193521 chr11:019193521 0 W/19193521-19193521 FN631-S Single Base Substitution C-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1448-S.SNP.11:19196870 chr11:019196870 0 W/19196870-19196870 FN1448-S Single Base Substitution A-T INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2296.SNP.11:19201249 chr11:019201249 0 W/19201249-19201249 FN2296 SNP G -> T AC=1;AN=192;BQB=0.792321;DP=4926;DP4=2583,1975,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.00418e-08;MQSB=0.951726;RPB=0.999409;SGB=16.0922;VDB=0.272591;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.11:19209367 chr11:019209367 0 W/19209367-19209367 FN1097-S Single Base Substitution T-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN853-S.SNP.11:19210170 chr11:019210170 0 W/19210170-19210170 FN853-S Single Base Substitution C-T INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN4069-S.SNP.11:19210671 chr11:019210671 0 W/19210671-19210671 FN4069-S SNP G -> A AC=1;AN=182;BQB=0.624595;DP=2736;DP4=1336,1325,16,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.20795e-15;MQSB=0.801092;RPB=0.259762;SGB=138.839;VDB=0.682135;EFF=INTERGENIC(MODIFIER||||||||||1) FN-134.SNP.11:19210873 chr11:019210873 0 W/19210873-19210873 FN-134 Single Base Substitution G-A INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN3940-S.SNP.11:19212896 chr11:019212896 0 W/19212896-19212896 FN3940-S SNP A -> G AC=2;AN=158;BQB=0.995879;DP=2504;DP4=1273,1158,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.75411e-15;MQSB=0.992131;RPB=0.984037;SGB=77.8763;VDB=0.120544;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.11:19215630 chr11:019215630 0 W/19215630-19215630 FN1745-S SNP G -> A AC=1;AN=188;BQB=0.992718;DP=3297;DP4=1967,1303,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000303306;MQB=0.0710616;MQSB=0.788801;RPB=0.908317;SGB=20.9896;VDB=0.72876;EFF=INTRON(MODIFIER||||154|LOC_Os11g32560|protein_coding|CODING|LOC_Os11g32560.1|1|1) FN2496.SNP.11:19219264 chr11:019219264 0 W/19219264-19219264 FN2496 SNP C -> T AC=1;AN=200;BQB=0.937147;DP=4354;DP4=2230,1724,12,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.01281e-08;MQSB=0.364446;RPB=0.987478;SGB=36.6644;VDB=0.253219;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||217|LOC_Os11g32570|protein_coding|CODING|LOC_Os11g32570.1|2|1),INTRON(MODIFIER||||217|LOC_Os11g32570|protein_coding|CODING|LOC_Os11g32570.1|1|1);LOF=(LOC_Os11g32570|LOC_Os11g32570|1|1.00) FN2286.SNP.11:19225542 chr11:019225542 0 W/19225542-19225542 FN2286 SNP G -> C AC=2;AN=192;BQB=0.0314551;DP=4868;DP4=2562,2040,30,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.50037e-27;MQSB=0.965994;RPB=0.996481;SGB=69.9287;VDB=0.464175;EFF=INTERGENIC(MODIFIER||||||||||1) FN904-S.SNP.11:19226427 chr11:019226427 0 W/19226427-19226427 FN904-S Single Base Substitution T-A INTERGENIC HOMO SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN458-S.SNP.11:19226687 chr11:019226687 0 W/19226687-19226687 FN458-S Single Base Substitution G-A INTERGENIC HET SNo: 457, Mutant_ID: FN458-S, Generation: M2, Mutations: 46, Genes: 20, Seed availability: Yes. FN2223-S.SNP.11:19232748 chr11:019232748 0 W/19232748-19232748 FN2223-S SNP G -> A AC=1;AN=190;BQB=0.699732;DP=3937;DP4=1829,1795,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000394057;MQSB=0.0932237;RPB=0.901525;SGB=62.7569;VDB=0.921663;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R74C|168|LOC_Os11g32600|protein_coding|CODING|LOC_Os11g32600.1|1|1) FN1285-S.SNP.11:19234518 chr11:019234518 0 W/19234518-19234518 FN1285-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN-301.SNP.11:19236009 chr11:019236009 0 W/19236009-19236009 FN-301 Single Base Substitution T-C INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN-301.SNP.11:19237060 chr11:019237060 0 W/19237060-19237060 FN-301 Single Base Substitution G-A INTRON HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. W7-1-1.SNP.11:19242365 chr11:019242365 0 W/19242365-19242365 W7-1-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. W7-1-1.SNP.11:19242366 chr11:019242366 0 W/19242366-19242366 W7-1-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN492-S.SNP.11:19246515 chr11:019246515 0 W/19246515-19246515 FN492-S Single Base Substitution G-T INTERGENIC HET SNo: 490, Mutant_ID: FN492-S, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN711-S.SNP.11:19247396 chr11:019247396 0 W/19247396-19247396 FN711-S Single Base Substitution C-A INTERGENIC HOMO SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN403-S.SNP.11:19257205 chr11:019257205 0 W/19257205-19257205 FN403-S Single Base Substitution A-T INTERGENIC HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2289.SNP.11:19259106 chr11:019259106 0 W/19259106-19259106 FN2289 SNP G -> A AC=1;AN=192;BQB=0.735742;DP=4980;DP4=2520,2173,20,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.21186e-20;MQSB=0.854181;RPB=0.582439;SGB=69.9435;VDB=0.374348;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.11:19260828 chr11:019260828 0 W/19260828-19260828 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.575011;DP=3428;DP4=1849,1551,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.5709e-06;MQSB=0.89426;RPB=0.338253;SGB=-16.2342;VDB=0.428107;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.11:19262589 chr11:019262589 0 W/19262589-19262589 FN3309-S SNP T -> C AC=2;AN=184;BQB=0.997839;DP=2661;DP4=1447,1115,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.99604e-17;MQSB=0.98873;RPB=0.548946;SGB=125.613;VDB=0.382403;EFF=INTERGENIC(MODIFIER||||||||||1) FN4038-S.SNP.11:19280800 chr11:019280800 0 W/19280800-19280800 FN4038-S SNP G -> C AC=1;AN=168;BQB=0.902673;DP=2280;DP4=946,1219,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.17809e-10;MQSB=0.816764;RPB=0.909219;SGB=78.7577;VDB=0.28673;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A13G|398|LOC_Os11g32650|protein_coding|CODING|LOC_Os11g32650.1|1|1) FN785-S.SNP.11:19282401 chr11:019282401 0 W/19282401-19282401 FN785-S Single Base Substitution T-A INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN785-S.SNP.11:19282404 chr11:019282404 0 W/19282404-19282404 FN785-S Single Base Substitution G-A INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN_830-6-1.SNP.11:19282593 chr11:019282593 0 W/19282593-19282593 FN_830-6-1 Single Base Substitution G-A HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN3466-S.SNP.11:19286515 chr11:019286515 0 W/19286515-19286515 FN3466-S SNP G -> A AC=1;AN=184;BQB=0.618004;DP=2571;DP4=1146,1327,6,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=2.43736e-08;MQSB=1.942e-05;RPB=0.913962;SGB=60.4004;VDB=0.679639;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.11:19289516 chr11:019289516 0 W/19289516-19289516 FN_822-5-1 Single Base Substitution G-T HET LOC_Os11g32660 transposon protein, putative, unclassified, expressed SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN_822-5-1.SNP.11:19289517 chr11:019289517 0 W/19289517-19289517 FN_822-5-1 Single Base Substitution G-T HET LOC_Os11g32660 transposon protein, putative, unclassified, expressed SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2555-S.SNP.11:19289712 chr11:019289712 0 W/19289712-19289712 FN2555-S SNP T -> A AC=1;AN=198;BQB=0.0898262;DP=4311;DP4=1956,2125,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000231965;MQB=3.20765e-09;MQSB=0.999852;RPB=0.175826;SGB=77.1196;VDB=0.663613;EFF=INTRON(MODIFIER||||806|LOC_Os11g32660|protein_coding|CODING|LOC_Os11g32660.1|2|1) FN2103-S.SNP.11:19291180 chr11:019291180 0 W/19291180-19291180 FN2103-S SNP A -> G AC=2;AN=168;BQB=0.0609786;DP=3878;DP4=1818,1999,18,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.21113e-17;MQSB=0.694502;RPB=0.982201;SGB=130.811;VDB=0.994549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H691R|806|LOC_Os11g32660|protein_coding|CODING|LOC_Os11g32660.1|5|1) FN3332-S.SNP.11:19291439 chr11:019291439 0 W/19291439-19291439 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.821163;DP=2856;DP4=1362,1370,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.000498645;MQSB=0.172651;RPB=0.885316;SGB=20.7533;VDB=0.964611;EFF=INTRON(MODIFIER||||806|LOC_Os11g32660|protein_coding|CODING|LOC_Os11g32660.1|5|1) FN-269.SNP.11:19293719 chr11:019293719 0 W/19293719-19293719 FN-269 Single Base Substitution G-A INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2791-S.SNP.11:19296106 chr11:019296106 0 W/19296106-19296106 FN2791-S SNP C -> T AC=1;AN=198;BQB=0.96828;DP=4076;DP4=1744,2091,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.0252699;MQB=0.0180063;MQSB=0.000664421;RPB=0.999976;SGB=90.4807;VDB=0.232036;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V821I|964|LOC_Os11g32680|protein_coding|CODING|LOC_Os11g32680.1|4|1) FN2478.SNP.11:19296640 chr11:019296640 0 W/19296640-19296640 FN2478 SNP G -> T AC=1;AN=200;BQB=0.805127;DP=4437;DP4=2265,1903,11,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0308767;MQB=0.000194734;MQSB=9.04622e-09;RPB=0.497819;SGB=69.1109;VDB=0.554329;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I678|964|LOC_Os11g32680|protein_coding|CODING|LOC_Os11g32680.1|3|1) FN1086-S.SNP.11:19299323 chr11:019299323 0 W/19299323-19299323 FN1086-S Single Base Substitution A-G INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3369-S.SNP.11:19299572 chr11:019299572 0 W/19299572-19299572 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.897551;DP=3420;DP4=1687,1635,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.30553e-06;MQSB=0.221296;RPB=0.915131;SGB=42.7914;VDB=0.0555694;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.11:19299703 chr11:019299703 0 W/19299703-19299703 FN1033-S Single Base Substitution C-T INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2788-S.SNP.11:19300598 chr11:019300598 0 W/19300598-19300598 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.764124;DP=2562;DP4=1180,1130,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00156128;MQB=0.000124621;MQSB=2.59582e-12;RPB=0.985989;SGB=13.7737;VDB=0.533108;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.11:19301208 chr11:019301208 0 W/19301208-19301208 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.0130148;DP=4031;DP4=1670,2327,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0114116;MQB=0.418324;MQSB=0;RPB=0.237143;SGB=-177.768;VDB=0.469391;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.11:19302439 chr11:019302439 0 W/19302439-19302439 FN983-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g32690 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN2650-S.SNP.11:19303668 chr11:019303668 0 W/19303668-19303668 FN2650-S SNP T -> A AC=1;AN=200;BQB=0.318362;DP=5015;DP4=1801,2670,19,9;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0301097;MQB=0.000106516;MQSB=1.03493e-26;RPB=0.142335;SGB=-202.659;VDB=0.588518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.11:19303670 chr11:019303670 0 W/19303670-19303670 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.969511;DP=5031;DP4=2069,2681,10,9;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0306102;MQB=1.74135e-05;MQSB=2.14478e-20;RPB=0.324554;SGB=81.8956;VDB=0.756369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2166-S.SNP.11:19305168 chr11:019305168 0 W/19305168-19305168 FN2166-S SNP A -> T AC=2;AN=168;BQB=0.797939;DP=3676;DP4=2029,1591,19,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.72761e-17;MQSB=0.950949;RPB=0.999295;SGB=80.5243;VDB=0.828629;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.11:19307765 chr11:019307765 0 W/19307765-19307765 FN2781-S SNP A -> G AC=2;AN=198;BQB=0.986325;DP=4384;DP4=1912,2033,31,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.51505e-28;MQSB=0.0476627;RPB=0.694973;SGB=135.744;VDB=0.401193;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.11:19309368 chr11:019309368 0 W/19309368-19309368 FN2373 SNP G -> A AC=1;AN=192;BQB=0.478457;DP=5094;DP4=2871,1876,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.02759e-17;MQSB=0.925918;RPB=0.995879;SGB=-7.9965;VDB=0.86695;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.11:19309643 chr11:019309643 0 W/19309643-19309643 FN3675-S SNP A -> T AC=1;AN=190;BQB=0.991486;DP=3030;DP4=1183,1606,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000330033;MQB=1.78567e-07;MQSB=0.679908;RPB=0.999761;SGB=2.55724;VDB=0.825299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.11:19312246 chr11:019312246 0 W/19312246-19312246 FN2752-S SNP C -> G AC=1;AN=200;BQB=0.984629;DP=4506;DP4=2352,1861,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.46924e-10;MQSB=0.927754;RPB=0.642827;SGB=68.0801;VDB=0.0612098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.11:19316845 chr11:019316845 0 W/19316845-19316845 FN3637-S SNP A -> G AC=1;AN=190;BQB=0.540004;DP=2953;DP4=1409,1386,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000338639;MQB=0.000151;MQSB=0.998932;RPB=0.977574;SGB=25.439;VDB=0.845414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.11:19320393 chr11:019320393 0 W/19320393-19320393 FN3446-S SNP T -> A AC=1;AN=184;BQB=0.990164;DP=2717;DP4=1212,1420,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52479e-08;MQSB=0.999941;RPB=0.610352;SGB=42.7914;VDB=0.280825;EFF=INTERGENIC(MODIFIER||||||||||1) FN3596-S.SNP.11:19322758 chr11:019322758 0 W/19322758-19322758 FN3596-S SNP G -> A AC=1;AN=188;BQB=0.980899;DP=2625;DP4=1224,1344,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=1.07154e-05;MQSB=0.62687;RPB=0.788151;SGB=44.4357;VDB=0.233702;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.11:19323632 chr11:019323632 0 W/19323632-19323632 FN1520-S Single Base Substitution G-A INTERGENIC Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN597-S.SNP.11:19328003 chr11:019328003 0 W/19328003-19328003 FN597-S Single Base Substitution T-G INTERGENIC HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN1666-S.SNP.11:19330294 chr11:019330294 0 W/19330294-19330294 FN1666-S SNP G -> A AC=1;AN=188;BQB=0.000408741;DP=4152;DP4=1814,2278,15,26;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11168e-05;MQSB=0.954789;RPB=0.189859;SGB=-730.025;VDB=0.143218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.11:19330822 chr11:019330822 0 W/19330822-19330822 FN2781-S SNP C -> T AC=1;AN=198;BQB=0.973068;DP=3884;DP4=1985,1645,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.09335e-10;MQSB=0.822889;RPB=0.872418;SGB=39.7248;VDB=0.358403;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.11:19336340 chr11:019336340 0 W/19336340-19336340 FN2645-S SNP A -> G AC=1;AN=200;BQB=0.882332;DP=4933;DP4=2537,2172,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86368e-19;MQSB=0.832024;RPB=0.993727;SGB=30.3571;VDB=0.0144997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.11:19338756 chr11:019338756 0 W/19338756-19338756 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.929534;DP=4467;DP4=2166,2104,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.64977e-07;MQSB=0.180267;RPB=0.421032;SGB=28.7675;VDB=0.640627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.11:19344226 chr11:019344226 0 W/19344226-19344226 FN3506-S SNP C -> T AC=1;AN=188;BQB=0.987201;DP=2581;DP4=1334,1182,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.77037e-08;MQSB=0.896459;RPB=0.239384;SGB=53.5223;VDB=0.655596;EFF=INTERGENIC(MODIFIER||||||||||1) FN-236.SNP.11:19351414 chr11:019351414 0 W/19351414-19351414 FN-236 Single Base Substitution G-A INTERGENIC HOMO SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN1286-S.SNP.11:19351414 chr11:019351414 0 W/19351414-19351414 FN1286-S Single Base Substitution G-A INTERGENIC HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2297.SNP.11:19351414 chr11:019351414 0 W/19351414-19351414 FN2297 SNP G -> A AC=1;AN=192;BQB=0.719742;DP=4658;DP4=2109,2250,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.91793e-07;MQSB=0.138497;RPB=0.80628;SGB=-14.7687;VDB=0.0564303;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.11:19353244 chr11:019353244 0 W/19353244-19353244 FN_N1-116-1 Single Base Substitution C-T Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2195-S.SNP.11:19360226 chr11:019360226 0 W/19360226-19360226 FN2195-S SNP A -> G AC=2;AN=190;BQB=0.988984;DP=4981;DP4=2429,2225,18,25;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.71363e-23;MQSB=0.998671;RPB=0.128463;SGB=95.1683;VDB=0.652308;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.11:19365728 chr11:019365728 0 W/19365728-19365728 FN681-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g32780 expressed protein SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN1554-S.SNP.11:19384431 chr11:019384431 0 W/19384431-19384431 FN1554-S Single Base Substitution A-T INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN4078-S.SNP.11:19385805 chr11:019385805 0 W/19385805-19385805 FN4078-S SNP G -> A AC=1;AN=182;BQB=0.749716;DP=2779;DP4=1416,1258,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000683938;MQSB=0.401232;RPB=0.278637;SGB=35.0899;VDB=0.202829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A14T|471|LOC_Os11g32810|protein_coding|CODING|LOC_Os11g32810.1|2|1) FN2282.SNP.11:19387275 chr11:019387275 0 W/19387275-19387275 FN2282 SNP T -> A AC=1;AN=192;BQB=0.940617;DP=4962;DP4=2208,2370,22,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.19281e-18;MQSB=0.827238;RPB=0.991666;SGB=-4.04606;VDB=0.635794;EFF=INTRON(MODIFIER||||471|LOC_Os11g32810|protein_coding|CODING|LOC_Os11g32810.1|4|1) FN2282.SNP.11:19387276 chr11:019387276 0 W/19387276-19387276 FN2282 SNP T -> A AC=1;AN=192;BQB=0.934354;DP=4967;DP4=2229,2448,20,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.10533e-20;MQSB=0.912119;RPB=0.83972;SGB=32.3844;VDB=0.709191;EFF=INTRON(MODIFIER||||471|LOC_Os11g32810|protein_coding|CODING|LOC_Os11g32810.1|4|1) FN3520-S.SNP.11:19390290 chr11:019390290 0 W/19390290-19390290 FN3520-S SNP G -> A AC=1;AN=188;BQB=0.84843;DP=2631;DP4=1140,1399,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.19728e-13;MQSB=0.997577;RPB=0.328975;SGB=94.4119;VDB=0.499665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3494-S.SNP.11:19392843 chr11:019392843 0 W/19392843-19392843 FN3494-S SNP T -> A AC=2;AN=184;BQB=0.688854;DP=2516;DP4=1162,1263,7,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.58053e-12;MQSB=0.977848;RPB=0.315297;SGB=81.5311;VDB=0.997399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.11:19395122 chr11:019395122 0 W/19395122-19395122 FN3607-S SNP G -> C AC=1;AN=190;BQB=0.652041;DP=2485;DP4=1327,1064,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=2.75553e-05;MQSB=0.00534727;RPB=0.859917;SGB=21.8853;VDB=0.581149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.11:19397810 chr11:019397810 0 W/19397810-19397810 FN2784-S SNP T -> C AC=1;AN=198;BQB=0.0877915;DP=4298;DP4=1807,2031,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.26955e-14;MQSB=0.889259;RPB=0.687383;SGB=47.5102;VDB=0.416737;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.11:19399517 chr11:019399517 0 W/19399517-19399517 FN2697-S SNP T -> C AC=1;AN=200;BQB=0.253292;DP=4909;DP4=2223,2277,13,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39447e-06;MQSB=0.864536;RPB=0.896556;SGB=-78.5159;VDB=0.552277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.11:19400890 chr11:019400890 0 W/19400890-19400890 FN2690-S SNP C -> A AC=2;AN=200;BQB=0.992036;DP=5017;DP4=2453,2249,24,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.27884e-25;MQSB=0.995276;RPB=0.358391;SGB=155.635;VDB=0.958533;EFF=INTERGENIC(MODIFIER||||||||||1) FN3517-S.SNP.11:19401258 chr11:019401258 0 W/19401258-19401258 FN3517-S SNP C -> T AC=1;AN=188;BQB=0.980859;DP=2876;DP4=1271,1515,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.64564e-05;MQSB=0.973619;RPB=0.792272;SGB=25.3545;VDB=0.874265;EFF=INTERGENIC(MODIFIER||||||||||1) FN3451-S.SNP.11:19404394 chr11:019404394 0 W/19404394-19404394 FN3451-S SNP T -> A AC=1;AN=184;BQB=0.971396;DP=2524;DP4=1257,1199,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000303852;MQSB=0.866502;RPB=0.997142;SGB=30.6558;VDB=0.791433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.11:19405667 chr11:019405667 0 W/19405667-19405667 FN1121-S Single Base Substitution G-A INTRON HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2579-S.SNP.11:19407642 chr11:019407642 0 W/19407642-19407642 FN2579-S SNP A -> G AC=1;AN=198;BQB=0.519925;DP=3615;DP4=1605,1755,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0.00802213;MQB=0.0748852;MQSB=0.0140663;RPB=0.485247;SGB=58.1246;VDB=0.0829769;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K415R|844|LOC_Os11g32850|protein_coding|CODING|LOC_Os11g32850.1|4|1) FN230-S.SNP.11:19414581 chr11:019414581 0 W/19414581-19414581 FN230-S Single Base Substitution G-A INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN864-S.SNP.11:19416142 chr11:019416142 0 W/19416142-19416142 FN864-S Single Base Substitution A-T INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3990-S.SNP.11:19416817 chr11:019416817 0 W/19416817-19416817 FN3990-S SNP C -> T AC=1;AN=168;BQB=0.88325;DP=4135;DP4=1139,2785,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00169287;MQB=0.015715;MQSB=1.51688e-20;RPB=0.788627;SGB=100.912;VDB=0.0547007;EFF=INTRON(MODIFIER||||165|LOC_Os11g32870|protein_coding|CODING|LOC_Os11g32870.1|1|1) FN4150-S.SNP.11:19420512 chr11:019420512 0 W/19420512-19420512 FN4150-S SNP T -> A AC=2;AN=170;BQB=0.814098;DP=2322;DP4=1101,1145,20,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.25623e-18;MQSB=0.669168;RPB=0.927057;SGB=73.6222;VDB=0.604925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.11:19430255 chr11:019430255 0 W/19430255-19430255 FN3699-S SNP A -> G AC=1;AN=190;BQB=0.895262;DP=2684;DP4=1208,1341,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43402e-10;MQSB=0.990627;RPB=0.963122;SGB=76.4186;VDB=0.937004;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.11:19434080 chr11:019434080 0 W/19434080-19434080 FN735-S Single Base Substitution A-T INTRON HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN3715-S.SNP.11:19434257 chr11:019434257 0 W/19434257-19434257 FN3715-S SNP G -> T AC=1;AN=190;BQB=0.677153;DP=2510;DP4=1257,1023,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.29202e-08;MQSB=0.0114849;RPB=0.890108;SGB=-13.7759;VDB=0.228296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A121S|978|LOC_Os11g32900|protein_coding|CODING|LOC_Os11g32900.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A121S|873|LOC_Os11g32900|protein_coding|CODING|LOC_Os11g32900.2|4|1) FN2418.SNP.11:19435470 chr11:019435470 0 W/19435470-19435470 FN2418 SNP A -> C AC=1;AN=200;BQB=0.734397;DP=4694;DP4=2107,2279,3,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.56999e-05;MQSB=0.748391;RPB=0.699654;SGB=35.8441;VDB=0.76965;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Ccc|T311P|978|LOC_Os11g32900|protein_coding|CODING|LOC_Os11g32900.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Ccc|T311P|873|LOC_Os11g32900|protein_coding|CODING|LOC_Os11g32900.2|9|1) FN3322-S.SNP.11:19442766 chr11:019442766 0 W/19442766-19442766 FN3322-S SNP G -> A AC=1;AN=184;BQB=0.822588;DP=3185;DP4=1131,1866,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00515215;MQSB=0.915532;RPB=0.982232;SGB=10.6662;VDB=0.651538;EFF=UTR_5_PRIME(MODIFIER||1789||176|LOC_Os11g32910|protein_coding|CODING|LOC_Os11g32910.1|1|1) FN2729-S.SNP.11:19443309 chr11:019443309 0 W/19443309-19443309 FN2729-S SNP C -> T AC=1;AN=200;BQB=0.425913;DP=4696;DP4=2299,2154,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78667e-13;MQSB=0.920877;RPB=0.210409;SGB=65.5058;VDB=0.180818;EFF=INTERGENIC(MODIFIER||||||||||1) FN1464-S.SNP.11:19446175 chr11:019446175 0 W/19446175-19446175 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN408-S.SNP.11:19449643 chr11:019449643 0 W/19449643-19449643 FN408-S Single Base Substitution A-T INTRON HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN2664-S.SNP.11:19451937 chr11:019451937 0 W/19451937-19451937 FN2664-S SNP A -> T AC=1;AN=200;BQB=0.915225;DP=4790;DP4=2203,2392,8,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.63154e-16;MQSB=0.847144;RPB=0.83553;SGB=55.5366;VDB=0.713452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F115L|436|LOC_Os11g32940|protein_coding|CODING|LOC_Os11g32940.2|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F115L|436|LOC_Os11g32940|protein_coding|CODING|LOC_Os11g32940.3|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F115L|436|LOC_Os11g32940|protein_coding|CODING|LOC_Os11g32940.4|6|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttT/ttA|F153L|474|LOC_Os11g32940|protein_coding|CODING|LOC_Os11g32940.1|5|1) FN1552-S.SNP.11:19458506 chr11:019458506 0 W/19458506-19458506 FN1552-S SNP T -> C AC=2;AN=188;BQB=0.78099;DP=3029;DP4=1233,1737,16,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.8081e-17;MQSB=0.00336115;RPB=0.929149;SGB=45.6639;VDB=0.180385;EFF=INTERGENIC(MODIFIER||||||||||1) FN3548-S.SNP.11:19460851 chr11:019460851 0 W/19460851-19460851 FN3548-S SNP G -> A AC=1;AN=188;BQB=0.0870467;DP=2415;DP4=1256,852,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00282249;MQSB=0.917442;RPB=0.035068;SGB=-54.619;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN3564-S.SNP.11:19464815 chr11:019464815 0 W/19464815-19464815 FN3564-S SNP C -> T AC=1;AN=188;BQB=0.773476;DP=2772;DP4=1195,1500,2,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.64129e-06;MQSB=0.983081;RPB=0.965278;SGB=28.8977;VDB=0.890581;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.11:19474888 chr11:019474888 0 W/19474888-19474888 FN1423-S Single Base Substitution G-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3577-S.SNP.11:19480115 chr11:019480115 0 W/19480115-19480115 FN3577-S SNP C -> G AC=1;AN=188;BQB=0.943319;DP=2397;DP4=1212,1124,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.88102e-07;MQSB=0.965278;RPB=0.825989;SGB=28.8977;VDB=0.396784;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.11:19484855 chr11:019484855 0 W/19484855-19484855 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN4025-S.SNP.11:19490901 chr11:019490901 0 W/19490901-19490901 FN4025-S SNP G -> A AC=1;AN=168;BQB=0.939775;DP=2573;DP4=1233,1224,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0213758;MQB=0.00080358;MQSB=0.520429;RPB=0.834162;SGB=34.4498;VDB=0.364077;EFF=INTRON(MODIFIER||||558|LOC_Os11g32980|protein_coding|CODING|LOC_Os11g32980.1|2|1) FN4025-S.SNP.11:19490902 chr11:019490902 0 W/19490902-19490902 FN4025-S SNP A -> T AC=1;AN=168;BQB=0.972003;DP=2578;DP4=1239,1263,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0217223;MQB=0.00733793;MQSB=0.358487;RPB=0.742588;SGB=24.4556;VDB=0.800627;EFF=INTRON(MODIFIER||||558|LOC_Os11g32980|protein_coding|CODING|LOC_Os11g32980.1|2|1) FN1176-S.SNP.11:19496203 chr11:019496203 0 W/19496203-19496203 FN1176-S Single Base Substitution G-A INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1409-S.SNP.11:19518550 chr11:019518550 0 W/19518550-19518550 FN1409-S Single Base Substitution C-T INTRON HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2734-S.SNP.11:19519050 chr11:019519050 0 W/19519050-19519050 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.629282;DP=4494;DP4=1941,2212,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222519;MQB=1.56327e-05;MQSB=0.722958;RPB=0.329861;SGB=29.4541;VDB=0.307759;EFF=INTRON(MODIFIER||||721|LOC_Os11g33020|protein_coding|CODING|LOC_Os11g33020.1|3|1) FN4101-S.SNP.11:19522116 chr11:019522116 0 W/19522116-19522116 FN4101-S SNP A -> G AC=1;AN=182;BQB=0.905139;DP=3038;DP4=1632,1333,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000204097;MQSB=0.958942;RPB=0.726429;SGB=18.0739;VDB=0.201783;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.11:19522806 chr11:019522806 0 W/19522806-19522806 FN2713-S SNP T -> A AC=1;AN=200;BQB=0.340241;DP=3132;DP4=563,2318,2,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.19345e-08;MQSB=0.993765;RPB=0.915744;SGB=33.0593;VDB=0.174864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.11:19522807 chr11:019522807 0 W/19522807-19522807 FN2713-S SNP C -> A AC=1;AN=200;BQB=0.355553;DP=3110;DP4=574,2340,2,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.77937e-08;MQSB=0.999683;RPB=0.997693;SGB=45.0543;VDB=0.203003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.11:19528396 chr11:019528396 0 W/19528396-19528396 FN2499 SNP C -> T AC=1;AN=200;BQB=0.999476;DP=4324;DP4=2133,2033,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000231267;MQB=3.10586e-10;MQSB=0.978509;RPB=0.899461;SGB=68.0801;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN4070-S.SNP.11:19537074 chr11:019537074 0 W/19537074-19537074 FN4070-S SNP A -> T AC=2;AN=182;BQB=0.89992;DP=2709;DP4=1302,1314,21,19;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.88266e-23;MQSB=0.9841;RPB=0.267305;SGB=174.926;VDB=0.446982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.11:19540327 chr11:019540327 0 W/19540327-19540327 FN3821-S SNP T -> A AC=1;AN=190;BQB=0.863681;DP=2473;DP4=1257,1098,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000307427;MQSB=0.954018;RPB=0.988811;SGB=30.8803;VDB=0.325119;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.11:19542809 chr11:019542809 0 W/19542809-19542809 FN724-S Single Base Substitution C-G INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN322-S.SNP.11:19543914 chr11:019543914 0 W/19543914-19543914 FN322-S Single Base Substitution C-A INTERGENIC HOMO SNo: 317, Mutant_ID: FN322-S, Generation: M2, Mutations: 50, Genes: 19, Seed availability: Yes. FN3607-S.SNP.11:19549020 chr11:019549020 0 W/19549020-19549020 FN3607-S SNP G -> A AC=1;AN=190;BQB=0.999249;DP=2736;DP4=1342,1290,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27626e-07;MQSB=0.971644;RPB=0.832906;SGB=21.1058;VDB=0.347065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P1653S|1756|LOC_Os11g33070|protein_coding|CODING|LOC_Os11g33070.1|7|1) FN3791-S.SNP.11:19551328 chr11:019551328 0 W/19551328-19551328 FN3791-S SNP C -> T AC=1;AN=190;BQB=0.818327;DP=3005;DP4=1475,1422,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000665557;MQB=6.97562e-06;MQSB=0.964012;RPB=0.906403;SGB=53.6492;VDB=0.760401;EFF=INTRON(MODIFIER||||1756|LOC_Os11g33070|protein_coding|CODING|LOC_Os11g33070.1|5|1) FN2498.SNP.11:19559078 chr11:019559078 0 W/19559078-19559078 FN2498 SNP A -> T AC=1;AN=200;BQB=0.937058;DP=4412;DP4=2089,1959,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71743e-13;MQSB=0.749226;RPB=0.38016;SGB=-40.0535;VDB=0.214314;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.11:19563436 chr11:019563436 0 W/19563436-19563436 FN1045-S Single Base Substitution A-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN2681-S.SNP.11:19576786 chr11:019576786 0 W/19576786-19576786 FN2681-S SNP A -> G AC=1;AN=200;BQB=0.942786;DP=5024;DP4=2231,2321,17,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000199045;MQB=2.46122e-17;MQSB=0.298888;RPB=0.41241;SGB=28.752;VDB=0.267301;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.11:19576787 chr11:019576787 0 W/19576787-19576787 FN2681-S SNP C -> T AC=1;AN=200;BQB=0.88517;DP=5038;DP4=2198,2193,16,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000198491;MQB=2.29768e-14;MQSB=0.206038;RPB=0.419794;SGB=94.3471;VDB=0.43885;EFF=INTERGENIC(MODIFIER||||||||||1) FN1065-S.SNP.11:19580986 chr11:019580986 0 W/19580986-19580986 FN1065-S Single Base Substitution A-T INTRON HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN1536-S.SNP.11:19580986 chr11:019580986 0 W/19580986-19580986 FN1536-S Single Base Substitution A-T INTRON HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN2499.SNP.11:19580986 chr11:019580986 0 W/19580986-19580986 FN2499 SNP A -> T AC=1;AN=200;BQB=0.667014;DP=4326;DP4=2035,1916,6,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=5.6165e-08;MQSB=0.0839331;RPB=0.992066;SGB=16.4591;VDB=0.396891;EFF=INTRON(MODIFIER||||268|LOC_Os11g33100|protein_coding|CODING|LOC_Os11g33100.1|1|1) FN541-S.SNP.11:19580986 chr11:019580986 0 W/19580986-19580986 FN541-S Single Base Substitution A-T INTRON HET SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN3863-S.SNP.11:19582689 chr11:019582689 0 W/19582689-19582689 FN3863-S SNP T -> A AC=2;AN=158;BQB=0.995484;DP=2466;DP4=1174,1214,16,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.01801e-14;MQSB=0.861921;RPB=0.434868;SGB=99.5005;VDB=0.103145;EFF=INTRON(MODIFIER||||268|LOC_Os11g33100|protein_coding|CODING|LOC_Os11g33100.1|1|1) FN4241-S.SNP.11:19600361 chr11:019600361 0 W/19600361-19600361 FN4241-S SNP C -> T AC=1;AN=170;BQB=0.999918;DP=1848;DP4=793,921,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.00108225;MQB=0.000109237;MQSB=0.416363;RPB=0.996093;SGB=52.3148;VDB=0.899512;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.11:19603891 chr11:019603891 0 W/19603891-19603891 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.857221;DP=4382;DP4=2219,1880,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0;MQB=0.000136859;MQSB=0.955042;RPB=0.998074;SGB=50.1053;VDB=0.631725;EFF=INTERGENIC(MODIFIER||||||||||1) FN-131.SNP.11:19627479 chr11:019627479 0 W/19627479-19627479 FN-131 Single Base Substitution C-T INTERGENIC HET SNo: 131, Mutant_ID: FN-131, Generation: M2, Mutations: 63, Genes: 40, Seed availability: Yes. FN2656-S.SNP.11:19628155 chr11:019628155 0 W/19628155-19628155 FN2656-S SNP C -> A AC=1;AN=200;BQB=0.8639;DP=4242;DP4=2174,1824,18,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54396e-17;MQSB=0.998378;RPB=0.96947;SGB=127.947;VDB=0.0842972;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P31|163|LOC_Os11g33160|protein_coding|CODING|LOC_Os11g33160.1|1|1) FN3808-S.SNP.11:19642388 chr11:019642388 0 W/19642388-19642388 FN3808-S SNP G -> A AC=2;AN=190;BQB=0.94548;DP=2745;DP4=1421,1233,8,13;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=2.76847e-06;MQSB=0.00456459;RPB=0.999901;SGB=90.0802;VDB=0.434801;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V527|600|LOC_Os11g33210|protein_coding|CODING|LOC_Os11g33210.1|1|1) FN-346.SNP.11:19648869 chr11:019648869 0 W/19648869-19648869 FN-346 Single Base Substitution C-T INTERGENIC HOMO SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2665-S.SNP.11:19655329 chr11:019655329 0 W/19655329-19655329 FN2665-S SNP C -> G AC=1;AN=200;BQB=0.866385;DP=4797;DP4=2541,1984,20,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.66365e-19;MQSB=0.955201;RPB=0.800134;SGB=68.5625;VDB=0.926964;EFF=INTRON(MODIFIER||||472|LOC_Os11g33240|protein_coding|CODING|LOC_Os11g33240.1|19|1),INTRON(MODIFIER||||472|LOC_Os11g33240|protein_coding|CODING|LOC_Os11g33240.2|19|1),INTRON(MODIFIER||||441|LOC_Os11g33240|protein_coding|CODING|LOC_Os11g33240.3|18|1) FN2477.SNP.11:19661570 chr11:019661570 0 W/19661570-19661570 FN2477 SNP C -> G AC=1;AN=200;BQB=0.989335;DP=4506;DP4=2184,2111,8,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.89544e-05;MQSB=0.346541;RPB=0.777175;SGB=63.4749;VDB=0.686957;EFF=INTRON(MODIFIER||||428|LOC_Os11g33260|protein_coding|CODING|LOC_Os11g33260.1|3|1) FN2562-S.SNP.11:19669103 chr11:019669103 0 W/19669103-19669103 FN2562-S SNP A -> G AC=1;AN=198;BQB=0.0879073;DP=3637;DP4=1479,1851,8,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.80907e-10;MQSB=0.618157;RPB=0.805457;SGB=26.8957;VDB=0.992712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2577-S.SNP.11:19714800 chr11:019714800 0 W/19714800-19714800 FN2577-S SNP T -> G AC=2;AN=198;BQB=0.877945;DP=3570;DP4=1599,1758,10,17;HOB=0.019998;ICB=0.495001;MQ=39;MQ0F=0;MQB=9.86217e-12;MQSB=0.619105;RPB=0.828068;SGB=86.8856;VDB=0.013699;EFF=INTRON(MODIFIER||||716|LOC_Os11g33330|protein_coding|CODING|LOC_Os11g33330.1|8|1) FN337-S.SNP.11:19714826 chr11:019714826 0 W/19714826-19714826 FN337-S Single Base Substitution T-A INTRON HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN2310.SNP.11:19794340 chr11:019794340 0 W/19794340-19794340 FN2310 SNP G -> T AC=1;AN=192;BQB=0.660657;DP=8049;DP4=4284,3150,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00708163;MQB=0.00229055;MQSB=4.04693e-30;RPB=0.998874;SGB=90.2896;VDB=0.887823;EFF=INTERGENIC(MODIFIER||||||||||1) FN416-S.SNP.11:19817463 chr11:019817463 0 W/19817463-19817463 FN416-S Single Base Substitution T-G INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1156-XA21.SNP.11:19873061 chr11:019873061 0 W/19873061-19873061 FN1156-XA21 Single Base Substitution A-G INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3407-S.SNP.11:19875442 chr11:019875442 0 W/19875442-19875442 FN3407-S SNP G -> A AC=2;AN=184;BQB=0.21689;DP=2640;DP4=1033,1512,9,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.42812e-06;MQSB=0.222129;RPB=0.93095;SGB=35.884;VDB=0.395713;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G281|327|LOC_Os11g34020|protein_coding|CODING|LOC_Os11g34020.1|1|1) FN-208.SNP.11:19885636 chr11:019885636 0 W/19885636-19885636 FN-208 Single Base Substitution C-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN-171.SNP.11:19888642 chr11:019888642 0 W/19888642-19888642 FN-171 Single Base Substitution G-C INTERGENIC HOMO SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3656-S.SNP.11:19888642 chr11:019888642 0 W/19888642-19888642 FN3656-S SNP G -> C AC=2;AN=190;BQB=0.976318;DP=2165;DP4=927,1131,2,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.81203e-06;MQSB=0.797708;RPB=0.412747;SGB=49.0954;VDB=0.858265;EFF=INTERGENIC(MODIFIER||||||||||1) FN_830-6-1.SNP.11:19888642 chr11:019888642 0 W/19888642-19888642 FN_830-6-1 Single Base Substitution G-C HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN983-S.SNP.11:19895181 chr11:019895181 0 W/19895181-19895181 FN983-S Single Base Substitution C-G INTERGENIC HET SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN4133-S.SNP.11:19895368 chr11:019895368 0 W/19895368-19895368 FN4133-S SNP A -> G AC=1;AN=182;BQB=0.726859;DP=2664;DP4=1205,1407,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.53177e-08;MQSB=0.996322;RPB=0.849458;SGB=66.6657;VDB=0.0482089;EFF=INTERGENIC(MODIFIER||||||||||1) FN681-S.SNP.11:19900514 chr11:019900514 0 W/19900514-19900514 FN681-S Single Base Substitution G-C INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN942-S.SNP.11:19901100 chr11:019901100 0 W/19901100-19901100 FN942-S Single Base Substitution C-T INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN_814-7-1.SNP.11:19904822 chr11:019904822 0 W/19904822-19904822 FN_814-7-1 Single Base Substitution C-T HET SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN1271-S.SNP.11:19905477 chr11:019905477 0 W/19905477-19905477 FN1271-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g34050 retrotransposon, putative, centromere-specific, expressed SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN915-S.SNP.11:19906420 chr11:019906420 0 W/19906420-19906420 FN915-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN1698-S.SNP.11:19908862 chr11:019908862 0 W/19908862-19908862 FN1698-S SNP G -> A AC=2;AN=188;BQB=0.748524;DP=2538;DP4=1790,718,16,8;HOB=0.0210502;ICB=0.494738;MQ=30;MQ0F=0.161939;MQB=0.999967;MQSB=1.84987e-24;RPB=0.787704;SGB=17.8846;VDB=0.834132;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.11:19914628 chr11:019914628 0 W/19914628-19914628 FN2488 SNP G -> T AC=2;AN=200;BQB=0.724431;DP=4460;DP4=2425,1720,21,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.24477e-23;MQSB=0.922771;RPB=0.973665;SGB=0.203511;VDB=0.108133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.11:19914630 chr11:019914630 0 W/19914630-19914630 FN2488 SNP C -> T AC=2;AN=200;BQB=0.814389;DP=4458;DP4=2454,1710,20,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.64203e-23;MQSB=0.984107;RPB=0.999119;SGB=84.1935;VDB=0.0877626;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.11:19916994 chr11:019916994 0 W/19916994-19916994 FN1665-S Single Base Substitution T-C INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1136-19-S.SNP.11:19921311 chr11:019921311 0 W/19921311-19921311 FN1136-19-S Single Base Substitution T-C INTERGENIC Homo SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3578-S.SNP.11:19928081 chr11:019928081 0 W/19928081-19928081 FN3578-S SNP T -> C AC=1;AN=188;BQB=0.737818;DP=2522;DP4=1438,1020,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.84872e-10;MQSB=0.998597;RPB=0.952315;SGB=13.2547;VDB=0.83328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3757-S.SNP.11:19930177 chr11:019930177 0 W/19930177-19930177 FN3757-S SNP C -> A AC=1;AN=190;BQB=0.977414;DP=2632;DP4=1368,1141,10,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.88343e-09;MQSB=0.979443;RPB=0.641551;SGB=39.6545;VDB=0.125465;EFF=INTERGENIC(MODIFIER||||||||||1) FN-146.SNP.11:19931733 chr11:019931733 0 W/19931733-19931733 FN-146 Single Base Substitution A-G INTERGENIC HET SNo: 146, Mutant_ID: FN-146, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2789-S.SNP.11:19940695 chr11:019940695 0 W/19940695-19940695 FN2789-S SNP A -> G AC=2;AN=198;BQB=0.979314;DP=4000;DP4=1917,1833,18,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.81364e-22;MQSB=0.977496;RPB=0.882884;SGB=126.432;VDB=0.0532317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1704-S.SNP.11:19943510 chr11:019943510 0 W/19943510-19943510 FN1704-S SNP G -> A AC=1;AN=188;BQB=0.645763;DP=2548;DP4=1172,1313,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0196232;MQB=0.295258;MQSB=5.50139e-16;RPB=0.904346;SGB=30.8063;VDB=0.913132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.11:19949939 chr11:019949939 0 W/19949939-19949939 FN3565-S SNP G -> A AC=1;AN=188;BQB=0.974509;DP=3433;DP4=1958,1384,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.65739e-11;MQSB=0.372121;RPB=0.893356;SGB=89.8686;VDB=0.0183178;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G7S|502|LOC_Os11g34090|protein_coding|CODING|LOC_Os11g34090.1|1|1) FN3558-S.SNP.11:19950299 chr11:019950299 0 W/19950299-19950299 FN3558-S SNP G -> A AC=1;AN=188;BQB=0.96046;DP=3195;DP4=1306,1742,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000312989;MQB=4.33075e-12;MQSB=0.522281;RPB=0.859182;SGB=80.782;VDB=0.0580173;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G127S|502|LOC_Os11g34090|protein_coding|CODING|LOC_Os11g34090.1|1|1) FN3558-S.SNP.11:19950300 chr11:019950300 0 W/19950300-19950300 FN3558-S SNP G -> A AC=1;AN=188;BQB=0.923794;DP=3177;DP4=1305,1668,7,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000314762;MQB=8.00599e-10;MQSB=0.841725;RPB=0.787717;SGB=80.782;VDB=0.0948548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G127D|502|LOC_Os11g34090|protein_coding|CODING|LOC_Os11g34090.1|1|1) FN3353-S.SNP.11:19952878 chr11:019952878 0 W/19952878-19952878 FN3353-S SNP C -> A AC=1;AN=182;BQB=0.992671;DP=3700;DP4=1627,1938,7,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.09077e-10;MQSB=0.970093;RPB=0.78414;SGB=75.8731;VDB=0.288302;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A346|502|LOC_Os11g34090|protein_coding|CODING|LOC_Os11g34090.1|2|1) FN2749-S.SNP.11:19953774 chr11:019953774 0 W/19953774-19953774 FN2749-S SNP C -> A AC=1;AN=200;BQB=0.303746;DP=4950;DP4=2438,2264,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00020202;MQB=3.27677e-06;MQSB=0.968618;RPB=0.0037774;SGB=13.8539;VDB=0.00689749;EFF=INTERGENIC(MODIFIER||||||||||1) FN4133-S.SNP.11:19959236 chr11:019959236 0 W/19959236-19959236 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.793515;DP=2777;DP4=1401,1311,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.03543e-10;MQSB=0.921803;RPB=0.982517;SGB=25.655;VDB=0.934859;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V259I|448|LOC_Os11g34110|protein_coding|CODING|LOC_Os11g34110.1|7|1) FN4133-S.SNP.11:19959239 chr11:019959239 0 W/19959239-19959239 FN4133-S SNP C -> T AC=1;AN=182;BQB=0.988067;DP=2805;DP4=1409,1317,9,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.8329e-09;MQSB=0.896539;RPB=0.976816;SGB=57.644;VDB=0.900985;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A258T|448|LOC_Os11g34110|protein_coding|CODING|LOC_Os11g34110.1|7|1) FN1140-S.SNP.11:19962487 chr11:019962487 0 W/19962487-19962487 FN1140-S Single Base Substitution C-A INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1140-S.SNP.11:19962488 chr11:019962488 0 W/19962488-19962488 FN1140-S Single Base Substitution C-A INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1140-S.SNP.11:19962489 chr11:019962489 0 W/19962489-19962489 FN1140-S Single Base Substitution G-A INTRON HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN3914-S.SNP.11:19967796 chr11:019967796 0 W/19967796-19967796 FN3914-S SNP C -> T AC=1;AN=158;BQB=0.738392;DP=2264;DP4=1127,1041,3,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000199119;MQSB=0.979635;RPB=0.191526;SGB=17.2267;VDB=0.303943;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.11:19969036 chr11:019969036 0 W/19969036-19969036 FN-96 Single Base Substitution C-T INTERGENIC HOMO SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN4189-S.SNP.11:19972079 chr11:019972079 0 W/19972079-19972079 FN4189-S SNP A -> C AC=1;AN=170;BQB=0.980525;DP=2530;DP4=1173,1307,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.23953e-07;MQSB=0.988893;RPB=0.840729;SGB=38.987;VDB=0.224432;EFF=INTRON(MODIFIER||||962|LOC_Os11g34120|protein_coding|CODING|LOC_Os11g34120.1|18|1) FN2682-S.SNP.11:19974998 chr11:019974998 0 W/19974998-19974998 FN2682-S SNP T -> C AC=2;AN=200;BQB=0.191647;DP=4217;DP4=2068,1970,16,8;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.84493e-13;MQSB=0.864622;RPB=0.459964;SGB=-9.47921;VDB=0.355496;EFF=INTRON(MODIFIER||||962|LOC_Os11g34120|protein_coding|CODING|LOC_Os11g34120.1|12|1) FN974-S.SNP.11:19977576 chr11:019977576 0 W/19977576-19977576 FN974-S Single Base Substitution A-G INTRON HOMO SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN_788-1-1.SNP.11:19987862 chr11:019987862 0 W/19987862-19987862 FN_788-1-1 Single Base Substitution C-T HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN2407.SNP.11:19999424 chr11:019999424 0 W/19999424-19999424 FN2407 SNP C -> G AC=2;AN=200;BQB=0.344089;DP=4238;DP4=1935,2073,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.96999e-29;MQSB=0.858892;RPB=0.18439;SGB=180.871;VDB=0.642052;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.11:20002590 chr11:020002590 0 W/20002590-20002590 FN2304 SNP C -> T AC=2;AN=192;BQB=0.998134;DP=5102;DP4=2296,2396,30,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.38215e-34;MQSB=0.887179;RPB=0.996375;SGB=79.3148;VDB=0.371793;EFF=UTR_3_PRIME(MODIFIER||151||467|LOC_Os11g34160|protein_coding|CODING|LOC_Os11g34160.1|2|1) FN997-S.SNP.11:20013594 chr11:020013594 0 W/20013594-20013594 FN997-S Single Base Substitution T-A INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN2702-S.SNP.11:20015709 chr11:020015709 0 W/20015709-20015709 FN2702-S SNP A -> T AC=2;AN=200;BQB=0.715157;DP=4869;DP4=2195,2454,6,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.43856e-14;MQSB=0.997826;RPB=0.390176;SGB=79.9264;VDB=0.410529;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.11:20016112 chr11:020016112 0 W/20016112-20016112 FN767-S Single Base Substitution C-A INTERGENIC HOMO SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN_777-2-1.SNP.11:20017906 chr11:020017906 0 W/20017906-20017906 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN_777-2-1.SNP.11:20017911 chr11:020017911 0 W/20017911-20017911 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1763-S.SNP.11:20023732 chr11:020023732 0 W/20023732-20023732 FN1763-S SNP C -> T AC=1;AN=188;BQB=0.791958;DP=4324;DP4=2038,2240,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.05494e-08;MQSB=0.937083;RPB=0.15611;SGB=-66.2726;VDB=0.840056;EFF=INTRON(MODIFIER||||471|LOC_Os11g34190|protein_coding|CODING|LOC_Os11g34190.1|7|1) FN1284-S.SNP.11:20027537 chr11:020027537 0 W/20027537-20027537 FN1284-S Single Base Substitution G-A INTRON HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2290.SNP.11:20046708 chr11:020046708 0 W/20046708-20046708 FN2290 SNP A -> G AC=1;AN=192;BQB=0.436395;DP=5171;DP4=2694,2165,18,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.14132e-17;MQSB=0.905669;RPB=0.94731;SGB=126.804;VDB=0.588884;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y138|340|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y19|221|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.2|2|1),UTR_5_PRIME(MODIFIER||396||209|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.3|4|1),UTR_5_PRIME(MODIFIER||396||209|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.4|4|1),UTR_5_PRIME(MODIFIER||396||209|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.6|4|1),INTRON(MODIFIER||||284|LOC_Os11g34230|protein_coding|CODING|LOC_Os11g34230.5|3|1) FN678-S.SNP.11:20048796 chr11:020048796 0 W/20048796-20048796 FN678-S Single Base Substitution T-A INTRON HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN-149.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN-149 Single Base Substitution G-A INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN-286.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN-286 Single Base Substitution G-A INTERGENIC HOMO SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN-64.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN-64 Single Base Substitution G-A INTERGENIC HOMO SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN1450-S.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN1450-S Single Base Substitution G-A INTERGENIC HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN1534-S.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN1534-S Single Base Substitution G-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2551-S.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN2551-S SNP G -> A AC=1;AN=198;BQB=0.333308;DP=4213;DP4=1906,1987,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.57175e-09;MQSB=0.996173;RPB=0.984006;SGB=72.5245;VDB=0.596295;EFF=INTERGENIC(MODIFIER||||||||||1) FN2665-S.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.285683;DP=4823;DP4=2165,2340,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.59198e-15;MQSB=0.999928;RPB=0.736107;SGB=104.921;VDB=0.567657;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.11:20050670 chr11:020050670 0 W/20050670-20050670 FN358-S Single Base Substitution G-A INTERGENIC HOMO SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN3834-S.SNP.11:20064422 chr11:020064422 0 W/20064422-20064422 FN3834-S SNP C -> T AC=2;AN=190;BQB=0.678738;DP=2463;DP4=1150,1231,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.78383e-11;MQSB=0.999707;RPB=0.984362;SGB=108.296;VDB=0.0997502;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.11:20066539 chr11:020066539 0 W/20066539-20066539 FN-217 Single Base Substitution G-C INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN426-S.SNP.11:20069371 chr11:020069371 0 W/20069371-20069371 FN426-S Single Base Substitution G-C INTRON HOMO SNo: 425, Mutant_ID: FN426-S, Generation: M2, Mutations: 64, Genes: 34, Seed availability: Yes. FN3815-S.SNP.11:20071011 chr11:020071011 0 W/20071011-20071011 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.987418;DP=2620;DP4=1357,1145,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82316e-06;MQSB=0.945867;RPB=0.266068;SGB=35.4339;VDB=0.594469;EFF=UTR_5_PRIME(MODIFIER||517||500|LOC_Os11g34270|protein_coding|CODING|LOC_Os11g34270.1|5|1) FN997-S.SNP.11:20071686 chr11:020071686 0 W/20071686-20071686 FN997-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g34270 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN768-S.SNP.11:20075926 chr11:020075926 0 W/20075926-20075926 FN768-S Single Base Substitution A-T INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2247-S.SNP.11:20077568 chr11:020077568 0 W/20077568-20077568 FN2247-S SNP G -> A AC=1;AN=190;BQB=0.730624;DP=4182;DP4=2110,1697,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00023912;MQB=2.3447e-05;MQSB=0.0109501;RPB=0.992101;SGB=71.8647;VDB=0.724707;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.11:20078548 chr11:020078548 0 W/20078548-20078548 FN762-S Single Base Substitution C-T INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN1249-S.SNP.11:20080649 chr11:020080649 0 W/20080649-20080649 FN1249-S Single Base Substitution C-T INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2602-S.SNP.11:20081952 chr11:020081952 0 W/20081952-20081952 FN2602-S SNP G -> C AC=2;AN=198;BQB=0.785179;DP=3787;DP4=1775,1731,13,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.86303e-15;MQSB=0.982013;RPB=0.529908;SGB=57.8907;VDB=0.0990185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.11:20086687 chr11:020086687 0 W/20086687-20086687 FN3366-S SNP G -> A AC=2;AN=184;BQB=0.995616;DP=2780;DP4=1379,1257,22,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.9224e-21;MQSB=0.954704;RPB=0.692997;SGB=76.2326;VDB=0.456129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G559E|1917|LOC_Os11g34290|protein_coding|CODING|LOC_Os11g34290.1|2|1) FN2730-S.SNP.11:20089422 chr11:020089422 0 W/20089422-20089422 FN2730-S SNP T -> A AC=1;AN=200;BQB=0.935419;DP=4709;DP4=2339,2171,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212359;MQB=7.89277e-09;MQSB=0.3636;RPB=0.993421;SGB=26.8797;VDB=0.923849;EFF=INTRON(MODIFIER||||1917|LOC_Os11g34290|protein_coding|CODING|LOC_Os11g34290.1|3|1) FN824-S.SNP.11:20091145 chr11:020091145 0 W/20091145-20091145 FN824-S Single Base Substitution G-A INTRON HOMO SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN318-S.SNP.11:20091630 chr11:020091630 0 W/20091630-20091630 FN318-S Single Base Substitution C-A INTRON HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2211-S.SNP.11:20094587 chr11:020094587 0 W/20094587-20094587 FN2211-S SNP C -> T AC=2;AN=190;BQB=0.656242;DP=2607;DP4=1049,1113,9,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.1273e-05;MQSB=0.867354;RPB=0.9997;SGB=-13.222;VDB=0.388401;EFF=INTERGENIC(MODIFIER||||||||||1) FN2211-S.SNP.11:20094588 chr11:020094588 0 W/20094588-20094588 FN2211-S SNP G -> T AC=2;AN=190;BQB=0.501654;DP=2607;DP4=1041,1294,9,7;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.41367e-07;MQSB=0.922272;RPB=0.623902;SGB=46.7622;VDB=0.13063;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.11:20095017 chr11:020095017 0 W/20095017-20095017 FN3311-S Single Base Substitution C-T INTERGENIC HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN760-S.SNP.11:20097264 chr11:020097264 0 W/20097264-20097264 FN760-S Single Base Substitution A-T INTERGENIC HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN-166.SNP.11:20110782 chr11:020110782 0 W/20110782-20110782 FN-166 Single Base Substitution A-C INTRON HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN706-S.SNP.11:20117033 chr11:020117033 0 W/20117033-20117033 FN706-S Single Base Substitution C-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN760-S.SNP.11:20117249 chr11:020117249 0 W/20117249-20117249 FN760-S Single Base Substitution C-A INTERGENIC HET SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN893-S.SNP.11:20117669 chr11:020117669 0 W/20117669-20117669 FN893-S Single Base Substitution G-A INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN627-S.SNP.11:20119243 chr11:020119243 0 W/20119243-20119243 FN627-S Single Base Substitution T-C INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. W278-3-1.SNP.11:20127257 chr11:020127257 0 W/20127257-20127257 W278-3-1 Single Base Substitution T-C INTERGENIC HOMO SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3563-S.SNP.11:20129660 chr11:020129660 0 W/20129660-20129660 FN3563-S SNP A -> G AC=1;AN=188;BQB=0.99859;DP=3349;DP4=1385,1843,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58403e-09;MQSB=0.997598;RPB=0.732157;SGB=67.1521;VDB=0.745811;EFF=INTRON(MODIFIER||||604|LOC_Os11g34350|protein_coding|CODING|LOC_Os11g34350.1|1|1) FN873-S.SNP.11:20130562 chr11:020130562 0 W/20130562-20130562 FN873-S Single Base Substitution T-G INTRON HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2475.SNP.11:20135865 chr11:020135865 0 W/20135865-20135865 FN2475 SNP C -> A AC=1;AN=200;BQB=0.860636;DP=3503;DP4=1563,1569,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.4044e-07;MQSB=0.00884761;RPB=0.847727;SGB=33.0593;VDB=0.194617;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.11:20138487 chr11:020138487 0 W/20138487-20138487 FN3886-S SNP G -> A AC=2;AN=158;BQB=0.99357;DP=2330;DP4=1153,1083,8,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.51835e-11;MQSB=0.498292;RPB=0.925382;SGB=30.927;VDB=0.760876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R375H|514|LOC_Os11g34360|protein_coding|CODING|LOC_Os11g34360.1|2|1) FN_N1-151-7.SNP.11:20140734 chr11:020140734 0 W/20140734-20140734 FN_N1-151-7 Single Base Substitution G-C HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN-101.SNP.11:20142735 chr11:020142735 0 W/20142735-20142735 FN-101 Single Base Substitution C-G INTRON HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN-350.SNP.11:20148826 chr11:020148826 0 W/20148826-20148826 FN-350 Single Base Substitution C-A INTRON HOMO SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-341.SNP.11:20150948 chr11:020150948 0 W/20150948-20150948 FN-341 Single Base Substitution T-A INTERGENIC HET SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN1061-S.SNP.11:20151331 chr11:020151331 0 W/20151331-20151331 FN1061-S Single Base Substitution A-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN1061-S.SNP.11:20151338 chr11:020151338 0 W/20151338-20151338 FN1061-S Single Base Substitution C-T INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2649-S.SNP.11:20154989 chr11:020154989 0 W/20154989-20154989 FN2649-S SNP T -> C AC=2;AN=200;BQB=0.974981;DP=4896;DP4=2353,2174,31,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20132e-32;MQSB=0.90612;RPB=0.8296;SGB=141.507;VDB=0.405263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1366-S.SNP.11:20155646 chr11:020155646 0 W/20155646-20155646 FN1366-S Single Base Substitution T-C INTERGENIC HET SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3484-S.SNP.11:20159245 chr11:020159245 0 W/20159245-20159245 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.942155;DP=3925;DP4=1966,1872,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00968153;MQB=0.173138;MQSB=0.149226;RPB=0.137495;SGB=44.2207;VDB=0.0693857;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A247T|1739|LOC_Os11g34410|protein_coding|CODING|LOC_Os11g34410.1|1|1) FN1050-S.SNP.11:20162799 chr11:020162799 0 W/20162799-20162799 FN1050-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2697-S.SNP.11:20167171 chr11:020167171 0 W/20167171-20167171 FN2697-S SNP C -> T AC=1;AN=200;BQB=0.919104;DP=4484;DP4=2304,1961,5,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00156111;MQB=9.52665e-06;MQSB=0.917678;RPB=0.00298841;SGB=16.4591;VDB=0.0106462;EFF=INTRON(MODIFIER||||834|LOC_Os11g34420|protein_coding|CODING|LOC_Os11g34420.1|1|1) FN2260-S.SNP.11:20176678 chr11:020176678 0 W/20176678-20176678 FN2260-S SNP A -> T AC=1;AN=190;BQB=0.789497;DP=4710;DP4=2293,1996,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76664e-13;MQSB=0.7354;RPB=0.346089;SGB=64.5316;VDB=0.860177;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.11:20177120 chr11:020177120 0 W/20177120-20177120 FN1561-S Single Base Substitution C-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3427-S.SNP.11:20193185 chr11:020193185 0 W/20193185-20193185 FN3427-S SNP T -> C AC=1;AN=184;BQB=0.9004;DP=3525;DP4=1584,1800,11,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50744e-10;MQSB=0.998842;RPB=0.0726096;SGB=14.4113;VDB=0.552111;EFF=INTRON(MODIFIER||||205|LOC_Os11g34470|protein_coding|CODING|LOC_Os11g34470.1|3|1) FN3384-S.SNP.11:20193655 chr11:020193655 0 W/20193655-20193655 FN3384-S SNP G -> A AC=2;AN=184;BQB=0.421529;DP=3460;DP4=1713,1567,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.63088e-10;MQSB=0.99757;RPB=0.874263;SGB=107.526;VDB=0.409263;EFF=INTRON(MODIFIER||||205|LOC_Os11g34470|protein_coding|CODING|LOC_Os11g34470.1|2|1) FN3540-S.SNP.11:20195144 chr11:020195144 0 W/20195144-20195144 FN3540-S SNP G -> A AC=2;AN=188;BQB=0.892325;DP=3747;DP4=1759,1876,25,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.22673e-24;MQSB=0.826103;RPB=0.755493;SGB=145.826;VDB=0.832759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.11:20195553 chr11:020195553 0 W/20195553-20195553 FN2344 SNP G -> A AC=1;AN=192;BQB=0.0365123;DP=5330;DP4=2379,2436,20,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.78632e-18;MQSB=0.999229;RPB=0.393203;SGB=35.5131;VDB=0.598987;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.11:20200715 chr11:020200715 0 W/20200715-20200715 FN4300-S SNP A -> G AC=1;AN=170;BQB=0.863719;DP=2705;DP4=1368,1190,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.112015;MQB=0.999821;MQSB=4.1369e-25;RPB=0.960397;SGB=34.5445;VDB=0.822117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2497.SNP.11:20204851 chr11:020204851 0 W/20204851-20204851 FN2497 SNP C -> T AC=1;AN=200;BQB=0.796795;DP=4460;DP4=2124,2082,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00044843;MQB=6.22316e-07;MQSB=0.715182;RPB=0.584638;SGB=29.4849;VDB=0.134258;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W883*|1214|LOC_Os11g34490|protein_coding|CODING|LOC_Os11g34490.1|1|1);LOF=(LOC_Os11g34490|LOC_Os11g34490|1|1.00);NMD=(LOC_Os11g34490|LOC_Os11g34490|1|1.00) FN522-S.SNP.11:20206196 chr11:020206196 0 W/20206196-20206196 FN522-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g34490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN598-S.SNP.11:20210229 chr11:020210229 0 W/20210229-20210229 FN598-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g34500 retrotransposon protein, putative, unclassified, expressed SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN794-S.SNP.11:20212128 chr11:020212128 0 W/20212128-20212128 FN794-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g34500 retrotransposon protein, putative, unclassified, expressed SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN3443-S.SNP.11:20214647 chr11:020214647 0 W/20214647-20214647 FN3443-S SNP C -> A AC=1;AN=184;BQB=0.100269;DP=3637;DP4=1597,1895,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.130327;MQB=0.748647;MQSB=0;RPB=0.960427;SGB=42.7914;VDB=0.989808;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R1717|1800|LOC_Os11g34500|protein_coding|CODING|LOC_Os11g34500.1|7|1) FN1302-S.SNP.11:20214847 chr11:020214847 0 W/20214847-20214847 FN1302-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3326-S.SNP.11:20215042 chr11:020215042 0 W/20215042-20215042 FN3326-S SNP G -> A AC=2;AN=184;BQB=0.89076;DP=3589;DP4=1896,1542,21,18;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00250766;MQB=2.331e-15;MQSB=0.0293652;RPB=0.166914;SGB=170.831;VDB=0.182458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.11:20218222 chr11:020218222 0 W/20218222-20218222 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3856-S.SNP.11:20218643 chr11:020218643 0 W/20218643-20218643 FN3856-S SNP G -> A AC=1;AN=158;BQB=0.993141;DP=2847;DP4=1263,1492,7,5;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.0115911;MQB=0.00163128;MQSB=6.81705e-23;RPB=0.0967072;SGB=14.3409;VDB=0.390412;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.11:20220873 chr11:020220873 0 W/20220873-20220873 FN2327 SNP G -> A AC=1;AN=192;BQB=0.986393;DP=5085;DP4=2410,2264,5,11;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.117011;MQB=0.479827;MQSB=2.55811e-20;RPB=0.910236;SGB=5.79046;VDB=0.0787794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.11:20224744 chr11:020224744 0 W/20224744-20224744 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.207752;DP=4382;DP4=2083,2017,10,2;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000456413;MQB=6.25611e-06;MQSB=0.154597;RPB=0.999993;SGB=33.0593;VDB=0.65871;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y290|606|LOC_Os11g34520|protein_coding|CODING|LOC_Os11g34520.1|2|1) FN3453-S.SNP.11:20231675 chr11:020231675 0 W/20231675-20231675 FN3453-S SNP G -> A AC=1;AN=184;BQB=0.877665;DP=3363;DP4=1587,1668,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00118941;MQB=5.54326e-07;MQSB=0.808485;RPB=0.866413;SGB=28.7043;VDB=0.983149;EFF=INTERGENIC(MODIFIER||||||||||1) FN3924-S.SNP.11:20236508 chr11:020236508 0 W/20236508-20236508 FN3924-S SNP C -> T AC=1;AN=158;BQB=0.529183;DP=2334;DP4=1063,1189,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0.012425;MQB=0.00475232;MQSB=0.00295941;RPB=0.994895;SGB=23.9652;VDB=0.73483;EFF=INTERGENIC(MODIFIER||||||||||1) FN-136.SNP.11:20237325 chr11:020237325 0 W/20237325-20237325 FN-136 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g34560 transposon protein, putative, unclassified SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN3360-S.SNP.11:20238764 chr11:020238764 0 W/20238764-20238764 FN3360-S SNP A -> G AC=1;AN=184;BQB=0.992542;DP=2837;DP4=1363,1394,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.60151e-08;MQSB=0.942167;RPB=0.570069;SGB=53.2642;VDB=0.822708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.11:20239947 chr11:020239947 0 W/20239947-20239947 FN3325-S SNP G -> T AC=2;AN=184;BQB=0.868059;DP=3228;DP4=1215,1896,10,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.19953e-12;MQSB=0.998062;RPB=0.589009;SGB=70.9657;VDB=0.161919;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L193|226|LOC_Os11g34570|protein_coding|CODING|LOC_Os11g34570.1|1|1) FN2497.SNP.11:20244226 chr11:020244226 0 W/20244226-20244226 FN2497 SNP G -> A AC=1;AN=200;BQB=0.464945;DP=3990;DP4=1782,2011,7,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.22321e-05;MQSB=0.396793;RPB=0.674646;SGB=13.8539;VDB=0.631431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V57I|979|LOC_Os11g34590|protein_coding|CODING|LOC_Os11g34590.1|1|1) FN2497.SNP.11:20244227 chr11:020244227 0 W/20244227-20244227 FN2497 SNP T -> A AC=1;AN=200;BQB=0.715028;DP=4017;DP4=1614,1999,8,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=2.69613e-06;MQSB=0.999784;RPB=0.52981;SGB=-1.74624;VDB=0.211022;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gAc|V57D|979|LOC_Os11g34590|protein_coding|CODING|LOC_Os11g34590.1|1|1) FN_546-3-1.SNP.11:20246008 chr11:020246008 0 W/20246008-20246008 FN_546-3-1 Single Base Substitution G-A Homo LOC_Os11g34590 retrotransposon protein, putative, unclassified, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN3606-S.SNP.11:20246379 chr11:020246379 0 W/20246379-20246379 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.770806;DP=1391;DP4=634,660,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000225813;MQSB=0.982689;RPB=0.989641;SGB=18.3316;VDB=0.0103095;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A675|979|LOC_Os11g34590|protein_coding|CODING|LOC_Os11g34590.1|3|1) FN3606-S.SNP.11:20246380 chr11:020246380 0 W/20246380-20246380 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.861818;DP=1400;DP4=648,668,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64923e-05;MQSB=0.969316;RPB=0.928931;SGB=30.8803;VDB=0.116387;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R676C|979|LOC_Os11g34590|protein_coding|CODING|LOC_Os11g34590.1|3|1) FN3819-S.SNP.11:20246887 chr11:020246887 0 W/20246887-20246887 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.997479;DP=2607;DP4=1573,962,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00460299;MQB=2.43281e-07;MQSB=0.852105;RPB=0.428397;SGB=62.7569;VDB=0.534261;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q845*|979|LOC_Os11g34590|protein_coding|CODING|LOC_Os11g34590.1|3|1) FN1350-S.SNP.11:20253424 chr11:020253424 0 W/20253424-20253424 FN1350-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g34600 retrotransposon protein, putative, unclassified, expressed SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. W475-4-2.SNP.11:20254800 chr11:020254800 0 W/20254800-20254800 W475-4-2 Single Base Substitution C-T INTERGENIC HET SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN2497.SNP.11:20255609 chr11:020255609 0 W/20255609-20255609 FN2497 SNP A -> T AC=1;AN=200;BQB=0.616366;DP=4888;DP4=2098,2404,10,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.81178e-09;MQSB=0.992816;RPB=0.755362;SGB=54.2646;VDB=0.963248;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.11:20260267 chr11:020260267 0 W/20260267-20260267 FN2482 SNP T -> C AC=2;AN=200;BQB=0.86994;DP=4582;DP4=1994,2267,11,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.26342e-14;MQSB=0.998634;RPB=0.722487;SGB=79.9264;VDB=0.190307;EFF=INTRON(MODIFIER||||334|LOC_Os11g34610|protein_coding|CODING|LOC_Os11g34610.1|5|1) FN778-S.SNP.11:20263978 chr11:020263978 0 W/20263978-20263978 FN778-S Single Base Substitution G-C INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN2697-S.SNP.11:20266105 chr11:020266105 0 W/20266105-20266105 FN2697-S SNP G -> A AC=1;AN=200;BQB=0.832617;DP=4673;DP4=2196,2121,20,24;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.88345e-24;MQSB=0.996545;RPB=0.706967;SGB=148.425;VDB=0.881129;EFF=INTRON(MODIFIER||||596|LOC_Os11g34624|protein_coding|CODING|LOC_Os11g34624.1|1|1) FN1339-S.SNP.11:20267179 chr11:020267179 0 W/20267179-20267179 FN1339-S Single Base Substitution T-A INTRON HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN4163-S.SNP.11:20268085 chr11:020268085 0 W/20268085-20268085 FN4163-S SNP C -> T AC=1;AN=170;BQB=0.98315;DP=2530;DP4=1042,1359,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.36042e-07;MQSB=0.925067;RPB=0.779649;SGB=38.987;VDB=0.577201;EFF=INTRON(MODIFIER||||596|LOC_Os11g34624|protein_coding|CODING|LOC_Os11g34624.1|1|1) FN2461.SNP.11:20276565 chr11:020276565 0 W/20276565-20276565 FN2461 SNP G -> T AC=2;AN=200;BQB=0.412173;DP=4117;DP4=1704,2132,17,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.92759e-25;MQSB=0.953736;RPB=0.971981;SGB=155.635;VDB=0.803933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.11:20278401 chr11:020278401 0 W/20278401-20278401 FN2461 SNP A -> G AC=2;AN=200;BQB=0.815023;DP=4687;DP4=2520,1926,33,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.00281e-28;MQSB=0.907907;RPB=0.868021;SGB=162.845;VDB=0.918995;EFF=INTRON(MODIFIER||||172|LOC_Os11g34650|protein_coding|CODING|LOC_Os11g34650.1|4|1) FN527-S.SNP.11:20280413 chr11:020280413 0 W/20280413-20280413 FN527-S Single Base Substitution A-C INTRON HOMO SNo: 525, Mutant_ID: FN527-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3573-S.SNP.11:20283234 chr11:020283234 0 W/20283234-20283234 FN3573-S SNP T -> C AC=1;AN=188;BQB=0.731237;DP=2717;DP4=1317,1339,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.36002e-11;MQSB=0.998814;RPB=0.447752;SGB=89.8686;VDB=0.812919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3510-S.SNP.11:20286039 chr11:020286039 0 W/20286039-20286039 FN3510-S SNP A -> C AC=1;AN=188;BQB=0.997077;DP=2172;DP4=1060,924,5,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.79199e-09;MQSB=0.874329;RPB=0.263807;SGB=28.6195;VDB=0.835487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.11:20286455 chr11:020286455 0 W/20286455-20286455 FN2645-S SNP T -> A AC=1;AN=200;BQB=0.743377;DP=3093;DP4=1829,987,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.17002e-11;MQSB=0.12131;RPB=0.920457;SGB=29.4849;VDB=0.662876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.11:20286459 chr11:020286459 0 W/20286459-20286459 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.999986;DP=3121;DP4=1867,1055,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.84755e-08;MQSB=0.109744;RPB=0.969847;SGB=58.8698;VDB=0.843751;EFF=INTERGENIC(MODIFIER||||||||||1) FN-73.SNP.11:20288500 chr11:020288500 0 W/20288500-20288500 FN-73 Single Base Substitution G-A INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN3707-S.SNP.11:20289001 chr11:020289001 0 W/20289001-20289001 FN3707-S SNP G -> C AC=1;AN=190;BQB=0.811379;DP=2570;DP4=1220,1251,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00155642;MQB=0.000674829;MQSB=0.304699;RPB=0.808438;SGB=4.11112;VDB=0.914061;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.11:20289955 chr11:020289955 0 W/20289955-20289955 FN1124-S Single Base Substitution A-G INTERGENIC HET SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN875-S.SNP.11:20290432 chr11:020290432 0 W/20290432-20290432 FN875-S Single Base Substitution A-T INTERGENIC HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN1001-S.SNP.11:20290920 chr11:020290920 0 W/20290920-20290920 FN1001-S Single Base Substitution C-G INTERGENIC HET SNo: 904, Mutant_ID: FN1001-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3502-S.SNP.11:20298828 chr11:020298828 0 W/20298828-20298828 FN3502-S SNP G -> A AC=1;AN=188;BQB=0.982222;DP=3306;DP4=1449,1750,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0620085;MQB=0.572924;MQSB=4.82604e-30;RPB=0.986431;SGB=20.9896;VDB=0.17229;EFF=INTRON(MODIFIER||||221|LOC_Os11g34660|protein_coding|CODING|LOC_Os11g34660.1|2|1) FN673-S.SNP.11:20300916 chr11:020300916 0 W/20300916-20300916 FN673-S Single Base Substitution A-T INTRON HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN3607-S.SNP.11:20304055 chr11:020304055 0 W/20304055-20304055 FN3607-S SNP A -> G AC=1;AN=190;BQB=0.855858;DP=1809;DP4=892,791,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.20207e-06;MQSB=0.396177;RPB=0.886953;SGB=39.9877;VDB=0.869737;EFF=INTRON(MODIFIER||||221|LOC_Os11g34660|protein_coding|CODING|LOC_Os11g34660.1|2|1) FN-304.SNP.11:20306576 chr11:020306576 0 W/20306576-20306576 FN-304 Single Base Substitution G-A INTRON HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1427-S.SNP.11:20306897 chr11:020306897 0 W/20306897-20306897 FN1427-S Single Base Substitution T-C INTRON HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN2649-S.SNP.11:20313274 chr11:020313274 0 W/20313274-20313274 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.462529;DP=4220;DP4=2437,1548,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.00479e-06;MQSB=0.00218485;RPB=0.999915;SGB=35.8441;VDB=0.388194;EFF=INTRON(MODIFIER||||221|LOC_Os11g34660|protein_coding|CODING|LOC_Os11g34660.1|4|1) FN2448.SNP.11:20318847 chr11:020318847 0 W/20318847-20318847 FN2448 SNP T -> G AC=2;AN=200;BQB=0.988332;DP=4311;DP4=2149,1829,13,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.49381e-18;MQSB=0.910297;RPB=0.549477;SGB=65.9573;VDB=0.0935723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2337.SNP.11:20324063 chr11:020324063 0 W/20324063-20324063 FN2337 SNP A -> T AC=1;AN=192;BQB=0.308931;DP=4962;DP4=2423,2273,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.31311e-14;MQSB=0.984722;RPB=0.715262;SGB=-7.43215;VDB=0.421414;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccT|P658|859|LOC_Os11g34690|protein_coding|CODING|LOC_Os11g34690.1|5|1) FN1644-S.SNP.11:20326548 chr11:020326548 0 W/20326548-20326548 FN1644-S Single Base Substitution C-T INTERGENIC HET SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3796-S.SNP.11:20341782 chr11:020341782 0 W/20341782-20341782 FN3796-S SNP A -> T AC=1;AN=190;BQB=0.946921;DP=2495;DP4=1331,1108,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.90738e-07;MQSB=0.939967;RPB=0.787002;SGB=25.439;VDB=0.340495;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.11:20349159 chr11:020349159 0 W/20349159-20349159 FN485-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN4052-S.SNP.11:20351763 chr11:020351763 0 W/20351763-20351763 FN4052-S SNP C -> T AC=1;AN=168;BQB=0.81355;DP=2601;DP4=1145,1343,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.41334e-07;MQSB=0.777791;RPB=0.999586;SGB=74.3269;VDB=0.805817;EFF=INTERGENIC(MODIFIER||||||||||1) FN-4.SNP.11:20353696 chr11:020353696 0 W/20353696-20353696 FN-4 Single Base Substitution C-T INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN3513-S.SNP.11:20359605 chr11:020359605 0 W/20359605-20359605 FN3513-S SNP C -> T AC=1;AN=188;BQB=0.455601;DP=2763;DP4=1197,1457,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.69035e-05;MQSB=0.875496;RPB=0.781951;SGB=15.903;VDB=0.737168;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.11:20360090 chr11:020360090 0 W/20360090-20360090 FN-308 Single Base Substitution A-G INTRON HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN1221-S.SNP.11:20360827 chr11:020360827 0 W/20360827-20360827 FN1221-S Single Base Substitution T-C INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2364.SNP.11:20368608 chr11:020368608 0 W/20368608-20368608 FN2364 SNP G -> T AC=1;AN=192;BQB=0.812574;DP=5269;DP4=2617,2341,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000189789;MQB=7.87826e-09;MQSB=0.696606;RPB=0.996556;SGB=-15.8974;VDB=0.609276;EFF=UTR_3_PRIME(MODIFIER||328||428|LOC_Os11g34750|protein_coding|CODING|LOC_Os11g34750.1|16|1|WARNING_TRANSCRIPT_INCOMPLETE) FN2274-S.SNP.11:20370010 chr11:020370010 0 W/20370010-20370010 FN2274-S SNP T -> A AC=2;AN=190;BQB=0.569985;DP=4951;DP4=2400,2081,34,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000201979;MQB=3.53819e-35;MQSB=0.628384;RPB=0.92805;SGB=80.2511;VDB=0.959855;EFF=INTRON(MODIFIER||||331|LOC_Os11g34760|protein_coding|CODING|LOC_Os11g34760.1|7|1) FN2224-S.SNP.11:20376966 chr11:020376966 0 W/20376966-20376966 FN2224-S SNP A -> T AC=1;AN=190;BQB=0.988577;DP=3908;DP4=1360,2317,10,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.84943e-16;MQSB=0.39872;RPB=0.0737247;SGB=59.414;VDB=0.0584368;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.11:20379380 chr11:020379380 0 W/20379380-20379380 FN4190-S SNP G -> A AC=1;AN=170;BQB=0.9252;DP=1922;DP4=640,1237,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0.00416233;MQB=0.0742771;MQSB=0.00199918;RPB=0.40845;SGB=25.6601;VDB=0.255256;EFF=INTERGENIC(MODIFIER||||||||||1) FN4081-S.SNP.11:20386048 chr11:020386048 0 W/20386048-20386048 FN4081-S SNP C -> T AC=2;AN=182;BQB=0.868198;DP=2879;DP4=1296,1465,16,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.85801e-17;MQSB=0.997942;RPB=0.143203;SGB=129.818;VDB=5.78451e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.11:20386667 chr11:020386667 0 W/20386667-20386667 FN2157-S SNP C -> A AC=2;AN=168;BQB=0.00216736;DP=3231;DP4=1470,1647,20,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.52265e-13;MQSB=0.93418;RPB=0.988898;SGB=-279.8;VDB=0.00301598;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.11:20388127 chr11:020388127 0 W/20388127-20388127 FN493-S Single Base Substitution C-A INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2307.SNP.11:20393316 chr11:020393316 0 W/20393316-20393316 FN2307 SNP G -> A AC=2;AN=192;BQB=0.904854;DP=3834;DP4=1962,1421,35,24;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.000782473;MQB=3.36276e-08;MQSB=1.74359e-10;RPB=0.576902;SGB=190.079;VDB=0.984902;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.11:20395570 chr11:020395570 0 W/20395570-20395570 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.999985;DP=2799;DP4=801,1908,5,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00035727;MQB=4.02229e-10;MQSB=0.989039;RPB=0.996665;SGB=46.3132;VDB=0.901652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.11:20395893 chr11:020395893 0 W/20395893-20395893 FN3505-S SNP C -> A AC=1;AN=188;BQB=0.721446;DP=1982;DP4=531,1259,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00376164;MQSB=0.184076;RPB=0.750541;SGB=30.8063;VDB=0.165403;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.11:20402151 chr11:020402151 0 W/20402151-20402151 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.642573;DP=3098;DP4=1274,1719,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.28306e-07;MQSB=0.987556;RPB=0.480014;SGB=6.80232;VDB=0.63687;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.11:20404645 chr11:020404645 0 W/20404645-20404645 FN863-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g34824 expressed protein SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1322-S.SNP.11:20404988 chr11:020404988 0 W/20404988-20404988 FN1322-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1125, Mutant_ID: FN1322-S, Generation: M2, Mutations: 44, Genes: 105, Seed availability: Yes. FN829-S.SNP.11:20413851 chr11:020413851 0 W/20413851-20413851 FN829-S Single Base Substitution G-T INTRON HET SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN_822-5-1.SNP.11:20430566 chr11:020430566 0 W/20430566-20430566 FN_822-5-1 Single Base Substitution A-T HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN2397.SNP.11:20442580 chr11:020442580 0 W/20442580-20442580 FN2397 SNP G -> T AC=1;AN=200;BQB=0.693456;DP=4810;DP4=2441,2097,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56704e-16;MQSB=0.981171;RPB=0.280792;SGB=114.132;VDB=0.0595122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.11:20444813 chr11:020444813 0 W/20444813-20444813 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.607471;DP=5069;DP4=2613,2222,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.64178e-12;MQSB=0.898236;RPB=0.749574;SGB=69.1109;VDB=0.904277;EFF=INTERGENIC(MODIFIER||||||||||1) FN2697-S.SNP.11:20447487 chr11:020447487 0 W/20447487-20447487 FN2697-S SNP T -> A AC=1;AN=200;BQB=0.974016;DP=4605;DP4=2298,2073,32,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.00604e-28;MQSB=0.999203;RPB=0.768748;SGB=152.03;VDB=0.69345;EFF=INTRON(MODIFIER||||587|LOC_Os11g34880|protein_coding|CODING|LOC_Os11g34880.1|2|1) FN1666-S.SNP.11:20448659 chr11:020448659 0 W/20448659-20448659 FN1666-S SNP T -> A AC=1;AN=188;BQB=0.662062;DP=4129;DP4=1930,2158,12,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.59324e-13;MQSB=0.96519;RPB=0.849285;SGB=54.0524;VDB=0.0886486;EFF=INTRON(MODIFIER||||587|LOC_Os11g34880|protein_coding|CODING|LOC_Os11g34880.1|2|1) FN497-S.SNP.11:20459456 chr11:020459456 0 W/20459456-20459456 FN497-S Single Base Substitution A-G INTRON HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. W674-4-1.SNP.11:20460938 chr11:020460938 0 W/20460938-20460938 W674-4-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN2730-S.SNP.11:20464422 chr11:020464422 0 W/20464422-20464422 FN2730-S SNP A -> G AC=1;AN=200;BQB=0.981082;DP=4918;DP4=2291,2391,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55631e-09;MQSB=0.900901;RPB=0.893414;SGB=77.2904;VDB=0.96683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aca/Gca|T886A|914|LOC_Os11g34920|protein_coding|CODING|LOC_Os11g34920.1|4|1) FN4090-S.SNP.11:20477462 chr11:020477462 0 W/20477462-20477462 FN4090-S SNP G -> A AC=1;AN=182;BQB=0.970269;DP=2893;DP4=1398,1404,11,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.29353e-12;MQSB=0.997994;RPB=0.431076;SGB=75.6874;VDB=0.0921095;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.11:20479811 chr11:020479811 0 W/20479811-20479811 FN969-S Single Base Substitution C-A INTERGENIC HET SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN1590-S.SNP.11:20481087 chr11:020481087 0 W/20481087-20481087 FN1590-S Single Base Substitution G-A INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN1590-S.SNP.11:20481088 chr11:020481088 0 W/20481088-20481088 FN1590-S Single Base Substitution T-A INTERGENIC HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN3553-S.SNP.11:20482745 chr11:020482745 0 W/20482745-20482745 FN3553-S SNP C -> T AC=2;AN=188;BQB=0.598095;DP=2946;DP4=1386,1466,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.30158e-15;MQSB=0.995282;RPB=0.874253;SGB=89.1337;VDB=0.996878;EFF=UTR_3_PRIME(MODIFIER||336||272|LOC_Os11g34950|protein_coding|CODING|LOC_Os11g34950.1|8|1),UTR_3_PRIME(MODIFIER||336||375|LOC_Os11g34950|protein_coding|CODING|LOC_Os11g34950.2|8|1) FN1717-S.SNP.11:20490071 chr11:020490071 0 W/20490071-20490071 FN1717-S SNP C -> T AC=1;AN=188;BQB=0.451198;DP=3723;DP4=1915,1770,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.80538e-08;MQSB=0.990333;RPB=0.745065;SGB=-37.8212;VDB=0.808333;EFF=INTERGENIC(MODIFIER||||||||||1) FN503-S.SNP.11:20494168 chr11:020494168 0 W/20494168-20494168 FN503-S Single Base Substitution G-A INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN-278.SNP.11:20494484 chr11:020494484 0 W/20494484-20494484 FN-278 Single Base Substitution T-A INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN3631-S.SNP.11:20499396 chr11:020499396 0 W/20499396-20499396 FN3631-S SNP G -> A AC=1;AN=190;BQB=0.907757;DP=2923;DP4=1393,1445,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28935e-05;MQSB=0.998758;RPB=0.661577;SGB=25.439;VDB=0.0622373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E206K|508|LOC_Os11g34970|protein_coding|CODING|LOC_Os11g34970.1|2|1) 705-3.SNP.11:20502897 chr11:020502897 0 W/20502897-20502897 705-3 Single Base Substitution C-T UTR_5_PRIME Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. FN3516-S.SNP.11:20505411 chr11:020505411 0 W/20505411-20505411 FN3516-S SNP C -> G AC=1;AN=188;BQB=0.948251;DP=2267;DP4=1240,979,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.58138e-08;MQSB=0.999792;RPB=0.978546;SGB=32.441;VDB=0.237988;EFF=INTRON(MODIFIER||||86|LOC_Os11g34990|protein_coding|CODING|LOC_Os11g34990.1|1|1) FN_N1-151-7.SNP.11:20509750 chr11:020509750 0 W/20509750-20509750 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1746-S.SNP.11:20511938 chr11:020511938 0 W/20511938-20511938 FN1746-S SNP C -> G AC=1;AN=188;BQB=0.708978;DP=996;DP4=577,367,5,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0119961;MQSB=0.994588;RPB=0.342787;SGB=3.18749;VDB=0.164651;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.11:20514399 chr11:020514399 0 W/20514399-20514399 FN2538-S SNP G -> A AC=1;AN=198;BQB=0.986156;DP=4061;DP4=2060,1815,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.34859e-07;MQSB=0.668658;RPB=0.443936;SGB=40.3588;VDB=0.775568;EFF=INTERGENIC(MODIFIER||||||||||1) FN411-S.SNP.11:20518574 chr11:020518574 0 W/20518574-20518574 FN411-S Single Base Substitution A-T UTR_3_PRIME HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN1329-S.SNP.11:20522007 chr11:020522007 0 W/20522007-20522007 FN1329-S Single Base Substitution T-C START_GAINED HET LOC_Os11g35030 growth regulating factor protein, putative, expressed SNo: 1131, Mutant_ID: FN1329-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2397.SNP.11:20528778 chr11:020528778 0 W/20528778-20528778 FN2397 SNP A -> G AC=1;AN=200;BQB=0.558782;DP=4252;DP4=2172,1627,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.56935e-12;MQSB=0.992163;RPB=0.998267;SGB=52.9314;VDB=0.84586;EFF=INTRON(MODIFIER||||442|LOC_Os11g35040|protein_coding|CODING|LOC_Os11g35040.1|1|1) FN3516-S.SNP.11:20529503 chr11:020529503 0 W/20529503-20529503 FN3516-S SNP T -> A AC=1;AN=188;BQB=0.999072;DP=3111;DP4=1405,1520,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.7149e-08;MQSB=0.903754;RPB=0.819238;SGB=26.0762;VDB=0.00328447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2780-S.SNP.11:20534696 chr11:020534696 0 W/20534696-20534696 FN2780-S SNP G -> A AC=1;AN=198;BQB=0.597188;DP=4322;DP4=2014,2138,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.24267e-07;MQSB=0.829538;RPB=0.860162;SGB=1.37381;VDB=0.881236;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R426C|811|LOC_Os11g35050|protein_coding|CODING|LOC_Os11g35050.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R424C|809|LOC_Os11g35050|protein_coding|CODING|LOC_Os11g35050.2|5|1) FN1453-S.SNP.11:20535821 chr11:020535821 0 W/20535821-20535821 FN1453-S Single Base Substitution T-A STOP_GAINED HOMO LOC_Os11g35050 expressed protein SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN-220.SNP.11:20545510 chr11:020545510 0 W/20545510-20545510 FN-220 Single Base Substitution T-C INTERGENIC HET SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2795-S.SNP.11:20546670 chr11:020546670 0 W/20546670-20546670 FN2795-S SNP G -> C AC=1;AN=198;BQB=0.88444;DP=4435;DP4=1925,2237,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.29745e-14;MQSB=0.987204;RPB=0.989078;SGB=-10.8602;VDB=0.659133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1623-S.SNP.11:20548777 chr11:020548777 0 W/20548777-20548777 FN1623-S Single Base Substitution A-G INTERGENIC HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2378.SNP.11:20555135 chr11:020555135 0 W/20555135-20555135 FN2378 SNP A -> T AC=1;AN=192;BQB=0.943365;DP=4964;DP4=2590,1886,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.89363e-15;MQSB=0.976853;RPB=0.897909;SGB=26.127;VDB=0.523284;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.11:20562606 chr11:020562606 0 W/20562606-20562606 FN469-S Single Base Substitution A-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN2370.SNP.11:20580339 chr11:020580339 0 W/20580339-20580339 FN2370 SNP C -> G AC=1;AN=192;BQB=0.993607;DP=4867;DP4=2391,2181,15,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74646e-14;MQSB=0.965272;RPB=0.165629;SGB=-7.9965;VDB=0.0878945;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R119T|234|LOC_Os11g35100|protein_coding|CODING|LOC_Os11g35100.1|4|1) FN3523-S.SNP.11:20582144 chr11:020582144 0 W/20582144-20582144 FN3523-S SNP C -> T AC=1;AN=188;BQB=0.144118;DP=3747;DP4=2186,1445,9,5;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=0.0250646;MQSB=5.52658e-20;RPB=0.822481;SGB=58.0655;VDB=0.0120091;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L23F|344|LOC_Os11g35110|protein_coding|CODING|LOC_Os11g35110.1|1|1) FN3548-S.SNP.11:20585034 chr11:020585034 0 W/20585034-20585034 FN3548-S SNP A -> T AC=1;AN=188;BQB=0.88109;DP=3154;DP4=1464,1489,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.78101e-05;MQSB=0.962802;RPB=0.124172;SGB=8.27326;VDB=0.377003;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.11:20613335 chr11:020613335 0 W/20613335-20613335 FN462-S Single Base Substitution T-G INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2696-S.SNP.11:20614644 chr11:020614644 0 W/20614644-20614644 FN2696-S SNP T -> C AC=1;AN=200;BQB=0.186979;DP=3332;DP4=1251,1270,5,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00030012;MQB=0.00476132;MQSB=3.19051e-06;RPB=0.938834;SGB=-16.7412;VDB=0.987825;EFF=INTERGENIC(MODIFIER||||||||||1) FN927-S.SNP.11:20620082 chr11:020620082 0 W/20620082-20620082 FN927-S Single Base Substitution A-G INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN-118.SNP.11:20621356 chr11:020621356 0 W/20621356-20621356 FN-118 Single Base Substitution G-T INTERGENIC HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN2652-S.SNP.11:20621523 chr11:020621523 0 W/20621523-20621523 FN2652-S SNP A -> G AC=1;AN=200;BQB=0.917854;DP=4756;DP4=2058,2471,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.77626e-17;MQSB=0.805142;RPB=0.979733;SGB=118.737;VDB=0.749646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.11:20623664 chr11:020623664 0 W/20623664-20623664 FN3457-S SNP G -> A AC=1;AN=184;BQB=0.991416;DP=3743;DP4=1799,1826,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0892332;MQB=0.840731;MQSB=0.877392;RPB=0.0249648;SGB=53.3568;VDB=0.0880389;EFF=INTRON(MODIFIER||||300|LOC_Os11g35160|protein_coding|CODING|LOC_Os11g35160.1|1|1) FN2598-S.SNP.11:20626286 chr11:020626286 0 W/20626286-20626286 FN2598-S SNP A -> G AC=1;AN=190;BQB=0.89286;DP=4103;DP4=2436,1339,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00438703;MQB=4.16395e-07;MQSB=1.08081e-28;RPB=0.99993;SGB=-93.0352;VDB=0.194308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.11:20630650 chr11:020630650 0 W/20630650-20630650 FN1436-S Single Base Substitution A-T INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1020-S.SNP.11:20632093 chr11:020632093 0 W/20632093-20632093 FN1020-S Single Base Substitution C-T INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN728-S.SNP.11:20643021 chr11:020643021 0 W/20643021-20643021 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN3778-S.SNP.11:20646499 chr11:020646499 0 W/20646499-20646499 FN3778-S SNP G -> A AC=2;AN=190;BQB=0.983323;DP=2438;DP4=1268,1062,20,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.37538e-20;MQSB=0.985337;RPB=0.997025;SGB=153.008;VDB=0.329432;EFF=INTRON(MODIFIER||||1024|LOC_Os11g35210|protein_coding|CODING|LOC_Os11g35210.1|3|1) FN1071-S.SNP.11:20650485 chr11:020650485 0 W/20650485-20650485 FN1071-S Single Base Substitution A-G INTERGENIC HET SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN3694-S.SNP.11:20656877 chr11:020656877 0 W/20656877-20656877 FN3694-S SNP A -> G AC=1;AN=190;BQB=0.464322;DP=2932;DP4=1232,1579,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000158677;MQSB=0.999364;RPB=0.753255;SGB=32.5467;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.11:20660513 chr11:020660513 0 W/20660513-20660513 FN419-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g35240 transposon protein, putative, unclassified, expressed SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN3811-S.SNP.11:20667460 chr11:020667460 0 W/20667460-20667460 FN3811-S SNP C -> T AC=1;AN=190;BQB=0.994921;DP=2625;DP4=1295,1241,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.10882e-09;MQSB=0.920462;RPB=0.310522;SGB=67.3108;VDB=0.797719;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.11:20675122 chr11:020675122 0 W/20675122-20675122 FN810-S Single Base Substitution A-T INTRON HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3555-S.SNP.11:20677631 chr11:020677631 0 W/20677631-20677631 FN3555-S SNP T -> G AC=1;AN=188;BQB=0.991222;DP=2440;DP4=991,1241,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.27436e-13;MQSB=0.941259;RPB=0.907816;SGB=46.4225;VDB=0.984141;EFF=INTERGENIC(MODIFIER||||||||||1) FN762-S.SNP.11:20686011 chr11:020686011 0 W/20686011-20686011 FN762-S Single Base Substitution T-C INTERGENIC HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2342.SNP.11:20690002 chr11:020690002 0 W/20690002-20690002 FN2342 SNP T -> A AC=1;AN=192;BQB=0.995884;DP=4460;DP4=1925,2141,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.31276e-10;MQSB=0.125874;RPB=0.740926;SGB=36.607;VDB=0.407143;EFF=INTERGENIC(MODIFIER||||||||||1) FN-309.SNP.11:20699147 chr11:020699147 0 W/20699147-20699147 FN-309 Single Base Substitution C-T INTRON HET SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN2538-S.SNP.11:20699516 chr11:020699516 0 W/20699516-20699516 FN2538-S SNP A -> T AC=1;AN=198;BQB=0.858459;DP=3916;DP4=1606,1951,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=8.30764e-09;MQSB=0.664848;RPB=0.832582;SGB=86.3098;VDB=0.958173;EFF=INTRON(MODIFIER||||295|LOC_Os11g35300|protein_coding|CODING|LOC_Os11g35300.1|3|1) FN3541-S.SNP.11:20699516 chr11:020699516 0 W/20699516-20699516 FN3541-S SNP A -> T AC=1;AN=188;BQB=0.754076;DP=3490;DP4=1373,1913,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.24464e-08;MQSB=0.135187;RPB=0.863978;SGB=13.2547;VDB=0.519858;EFF=INTRON(MODIFIER||||295|LOC_Os11g35300|protein_coding|CODING|LOC_Os11g35300.1|3|1) FN448-S.SNP.11:20699516 chr11:020699516 0 W/20699516-20699516 FN448-S Single Base Substitution A-T INTRON HOMO SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN2103-S.SNP.11:20710328 chr11:020710328 0 W/20710328-20710328 FN2103-S SNP T -> C AC=1;AN=168;BQB=0.167563;DP=3705;DP4=1891,1770,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.32715e-08;MQSB=0.9892;RPB=0.850165;SGB=-130.056;VDB=0.696565;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Gat|N298D|430|LOC_Os11g35320|protein_coding|CODING|LOC_Os11g35320.1|3|1) FN1200-S.SNP.11:20711333 chr11:020711333 0 W/20711333-20711333 FN1200-S Single Base Substitution G-A INTRON HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1662-S.SNP.11:20718859 chr11:020718859 0 W/20718859-20718859 FN1662-S Single Base Substitution A-G INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN4204-S.SNP.11:20724121 chr11:020724121 0 W/20724121-20724121 FN4204-S SNP G -> A AC=1;AN=170;BQB=0.848503;DP=2770;DP4=1342,1284,11,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.33211e-10;MQSB=0.999907;RPB=0.420761;SGB=92.2986;VDB=0.941135;EFF=UTR_3_PRIME(MODIFIER||122||112|LOC_Os11g35350|protein_coding|CODING|LOC_Os11g35350.1|1|1) FN-172.SNP.11:20724855 chr11:020724855 0 W/20724855-20724855 FN-172 Single Base Substitution C-T INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN-172.SNP.11:20724856 chr11:020724856 0 W/20724856-20724856 FN-172 Single Base Substitution G-T INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN2579-S.SNP.11:20729434 chr11:020729434 0 W/20729434-20729434 FN2579-S SNP C -> A AC=1;AN=198;BQB=0.589916;DP=3844;DP4=1676,1975,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.27365e-08;MQSB=0.992322;RPB=0.905057;SGB=54.5295;VDB=0.474316;EFF=INTERGENIC(MODIFIER||||||||||1) FN-371.SNP.11:20733546 chr11:020733546 0 W/20733546-20733546 FN-371 Single Base Substitution A-T INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN-305.SNP.11:20734722 chr11:020734722 0 W/20734722-20734722 FN-305 Single Base Substitution C-G INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3968-S.SNP.11:20734722 chr11:020734722 0 W/20734722-20734722 FN3968-S SNP C -> G AC=1;AN=168;BQB=0.673197;DP=2796;DP4=1292,1363,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.55764e-11;MQSB=0.89393;RPB=0.996227;SGB=44.0621;VDB=0.240704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3934-S.SNP.11:20736445 chr11:020736445 0 W/20736445-20736445 FN3934-S SNP G -> A AC=1;AN=158;BQB=0.989555;DP=2138;DP4=1056,987,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.91208e-08;MQSB=0.998054;RPB=0.583012;SGB=47.0672;VDB=0.288478;EFF=INTRON(MODIFIER||||330|LOC_Os11g35390|protein_coding|CODING|LOC_Os11g35390.1|2|1) FN3934-S.SNP.11:20736446 chr11:020736446 0 W/20736446-20736446 FN3934-S SNP G -> A AC=1;AN=158;BQB=0.950304;DP=2138;DP4=1054,969,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.84256e-08;MQSB=0.999125;RPB=0.614297;SGB=47.0672;VDB=0.274833;EFF=INTRON(MODIFIER||||330|LOC_Os11g35390|protein_coding|CODING|LOC_Os11g35390.1|2|1) FN3934-S.SNP.11:20736451 chr11:020736451 0 W/20736451-20736451 FN3934-S SNP G -> A AC=1;AN=158;BQB=0.814419;DP=2122;DP4=1051,994,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.17645e-07;MQSB=0.944112;RPB=0.645178;SGB=51.4366;VDB=0.444671;EFF=INTRON(MODIFIER||||330|LOC_Os11g35390|protein_coding|CODING|LOC_Os11g35390.1|2|1) FN2244-S.SNP.11:20739919 chr11:020739919 0 W/20739919-20739919 FN2244-S SNP A -> T AC=1;AN=190;BQB=0.86098;DP=4837;DP4=2327,2088,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13414e-10;MQSB=0.899086;RPB=0.73164;SGB=60.9777;VDB=0.406539;EFF=INTERGENIC(MODIFIER||||||||||1) FN3716-S.SNP.11:20742549 chr11:020742549 0 W/20742549-20742549 FN3716-S SNP T -> C AC=2;AN=190;BQB=0.840461;DP=2902;DP4=1307,1493,5,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.87777e-10;MQSB=0.962501;RPB=0.503961;SGB=67.3108;VDB=0.441478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.11:20766034 chr11:020766034 0 W/20766034-20766034 FN1638-S Single Base Substitution G-A INTRON Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3287-S.SNP.11:20768048 chr11:020768048 0 W/20768048-20768048 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.276006;DP=3384;DP4=1943,1336,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.68485e-10;MQSB=0.973682;RPB=0.143536;SGB=38.4058;VDB=0.84965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.11:20768134 chr11:020768134 0 W/20768134-20768134 FN3558-S SNP C -> T AC=1;AN=188;BQB=0.847321;DP=2770;DP4=1445,1260,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.87659e-07;MQSB=0.958898;RPB=0.999169;SGB=58.0655;VDB=0.185218;EFF=INTERGENIC(MODIFIER||||||||||1) FN2579-S.SNP.11:20769902 chr11:020769902 0 W/20769902-20769902 FN2579-S SNP G -> T AC=1;AN=198;BQB=0.981225;DP=4170;DP4=1890,1899,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000239808;MQB=5.81738e-07;MQSB=0.951687;RPB=0.756666;SGB=61.7198;VDB=0.329317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1566-S.SNP.11:20773513 chr11:020773513 0 W/20773513-20773513 FN1566-S Single Base Substitution G-A INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN-152.SNP.11:20782752 chr11:020782752 0 W/20782752-20782752 FN-152 Single Base Substitution T-G INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN-166.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN-166 Single Base Substitution T-A INTERGENIC HOMO SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN-37.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN-37 Single Base Substitution T-A INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN1348-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN1348-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1630-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN1630-S Single Base Substitution T-A INTERGENIC Homo SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1707-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN1707-S SNP T -> A AC=2;AN=188;BQB=0.296675;DP=3607;DP4=1834,1734,23,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.22464e-17;MQSB=0.978318;RPB=0.684918;SGB=30.2309;VDB=0.0468736;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN2749-S SNP T -> A AC=2;AN=200;BQB=0.860478;DP=4920;DP4=2338,2412,18,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.1958e-21;MQSB=0.992963;RPB=0.194815;SGB=36.7778;VDB=0.292921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3390-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN3390-S SNP T -> A AC=2;AN=184;BQB=0.990844;DP=2749;DP4=1247,1321,9,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.76164e-13;MQSB=0.995846;RPB=0.975756;SGB=60.4004;VDB=0.503724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN3437-S SNP T -> A AC=2;AN=184;BQB=0.972771;DP=2529;DP4=1149,1226,9,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.80532e-13;MQSB=0.996587;RPB=0.450282;SGB=70.9657;VDB=0.287982;EFF=INTERGENIC(MODIFIER||||||||||1) FN3780-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN3780-S SNP T -> A AC=2;AN=190;BQB=0.352142;DP=2470;DP4=1051,1249,8,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.07777e-12;MQSB=0.979557;RPB=0.942351;SGB=51.7524;VDB=0.381841;EFF=INTERGENIC(MODIFIER||||||||||1) FN4078-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN4078-S SNP T -> A AC=2;AN=182;BQB=0.944439;DP=2420;DP4=945,1355,7,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.03911e-08;MQSB=0.906295;RPB=1;SGB=42.6494;VDB=0.818589;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.11:20783228 chr11:020783228 0 W/20783228-20783228 FN425-S Single Base Substitution T-A INTERGENIC HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN884-S.SNP.11:20785086 chr11:020785086 0 W/20785086-20785086 FN884-S Single Base Substitution T-C INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN2180-S.SNP.11:20796975 chr11:020796975 0 W/20796975-20796975 FN2180-S SNP T -> C AC=1;AN=190;BQB=0.900097;DP=4573;DP4=2120,2088,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.80555e-12;MQSB=0.988414;RPB=0.419853;SGB=44.0907;VDB=0.699772;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tCg|L101S|921|LOC_Os11g35490|protein_coding|CODING|LOC_Os11g35490.1|1|1) FN1718-S.SNP.11:20800372 chr11:020800372 0 W/20800372-20800372 FN1718-S SNP G -> T AC=1;AN=188;BQB=0.0268607;DP=3268;DP4=1280,1912,15,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.69144e-10;MQSB=0.966885;RPB=0.57909;SGB=-184.54;VDB=0.875998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.11:20807447 chr11:020807447 0 W/20807447-20807447 FN3559-S SNP A -> T AC=1;AN=188;BQB=0.890235;DP=2401;DP4=1259,1060,11,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77012e-10;MQSB=0.993832;RPB=0.997024;SGB=67.1521;VDB=0.600127;EFF=INTERGENIC(MODIFIER||||||||||1) FN563-S.SNP.11:20809860 chr11:020809860 0 W/20809860-20809860 FN563-S Single Base Substitution G-T INTRON HOMO SNo: 555, Mutant_ID: FN563-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN3968-S.SNP.11:20811322 chr11:020811322 0 W/20811322-20811322 FN3968-S SNP G -> A AC=1;AN=168;BQB=0.994113;DP=2498;DP4=1374,1032,17,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.91395e-14;MQSB=0.999714;RPB=0.682055;SGB=79.3486;VDB=0.819747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D78N|285|LOC_Os11g35510|protein_coding|CODING|LOC_Os11g35510.1|2|1) FN689-S.SNP.11:20814605 chr11:020814605 0 W/20814605-20814605 FN689-S Single Base Substitution A-C INTERGENIC HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. W721-2-1.SNP.11:20816751 chr11:020816751 0 W/20816751-20816751 W721-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3810-S.SNP.11:20818001 chr11:020818001 0 W/20818001-20818001 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.943289;DP=2848;DP4=1259,1467,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.465e-07;MQSB=0.96409;RPB=0.13958;SGB=43.2083;VDB=0.684414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.11:20818481 chr11:020818481 0 W/20818481-20818481 FN1400-S Single Base Substitution G-A INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN4109-S.SNP.11:20823864 chr11:020823864 0 W/20823864-20823864 FN4109-S SNP G -> T AC=1;AN=182;BQB=0.965628;DP=3077;DP4=1561,1457,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.33931e-06;MQSB=0.34828;RPB=0.244356;SGB=39.6007;VDB=0.630515;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K233N|888|LOC_Os11g35520|protein_coding|CODING|LOC_Os11g35520.1|4|1) FN1655-S.SNP.11:20833182 chr11:020833182 0 W/20833182-20833182 FN1655-S Single Base Substitution A-C UTR_3_PRIME Homo SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN-127.SNP.11:20838991 chr11:020838991 0 W/20838991-20838991 FN-127 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g35550 Leucine Rich Repeat family protein, expressed SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2587-S.SNP.11:20844275 chr11:020844275 0 W/20844275-20844275 FN2587-S SNP C -> T AC=1;AN=198;BQB=0.999038;DP=4342;DP4=2129,1964,13,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.0371e-14;MQSB=0.947987;RPB=0.239735;SGB=97.671;VDB=0.528661;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.11:20844282 chr11:020844282 0 W/20844282-20844282 FN421-S Single Base Substitution T-A INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN421-S.SNP.11:20844283 chr11:020844283 0 W/20844283-20844283 FN421-S Single Base Substitution G-A INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN3926-S.SNP.11:20851987 chr11:020851987 0 W/20851987-20851987 FN3926-S SNP A -> T AC=1;AN=158;BQB=0.838966;DP=3087;DP4=1366,1607,11,13;HOB=8.01154e-05;ICB=0.000161245;MQ=34;MQ0F=0.101393;MQB=0.459342;MQSB=0.000113301;RPB=0.759531;SGB=99.5005;VDB=0.198597;EFF=INTRON(MODIFIER||||1762|LOC_Os11g35560|protein_coding|CODING|LOC_Os11g35560.1|4|1) FN2358.SNP.11:20852412 chr11:020852412 0 W/20852412-20852412 FN2358 SNP G -> T AC=1;AN=192;BQB=0.275432;DP=5256;DP4=1986,2913,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0.0806697;MQB=0.765656;MQSB=2.60822e-39;RPB=0.792688;SGB=-14.2043;VDB=0.120459;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P394H|1762|LOC_Os11g35560|protein_coding|CODING|LOC_Os11g35560.1|4|1) FN3769-S.SNP.11:20855233 chr11:020855233 0 W/20855233-20855233 FN3769-S SNP T -> C AC=1;AN=190;BQB=0.970302;DP=4897;DP4=1959,2690,16,7;HOB=5.54017e-05;ICB=0.000111386;MQ=30;MQ0F=0.0867878;MQB=0.0178818;MQSB=0;RPB=0.754368;SGB=71.6393;VDB=0.49035;EFF=INTRON(MODIFIER||||1762|LOC_Os11g35560|protein_coding|CODING|LOC_Os11g35560.1|2|1) FN4140-S.SNP.11:20860255 chr11:020860255 0 W/20860255-20860255 FN4140-S SNP T -> C AC=2;AN=170;BQB=0.976149;DP=2189;DP4=1004,1115,12,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.34127e-17;MQSB=0.863544;RPB=0.171809;SGB=83.0751;VDB=0.0746172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Gta|I833V|970|LOC_Os11g35580|protein_coding|CODING|LOC_Os11g35580.1|2|1) FN706-S.SNP.11:20860547 chr11:020860547 0 W/20860547-20860547 FN706-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN669-S.SNP.11:20862091 chr11:020862091 0 W/20862091-20862091 FN669-S Single Base Substitution C-A STOP_GAINED HET LOC_Os11g35580 disease resistance protein RPM1, putative, expressed SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN2619-S.SNP.11:20869145 chr11:020869145 0 W/20869145-20869145 FN2619-S SNP C -> A AC=1;AN=188;BQB=0.356333;DP=3807;DP4=1858,1746,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=7.68971e-09;MQSB=0.437833;RPB=0.890496;SGB=113.881;VDB=0.582175;EFF=INTRON(MODIFIER||||1449|LOC_Os11g35590|protein_coding|CODING|LOC_Os11g35590.1|5|1) FN1405-S.SNP.11:20871147 chr11:020871147 0 W/20871147-20871147 FN1405-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g35590 retrotransposon protein, putative, unclassified, expressed SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3845-S.SNP.11:20872669 chr11:020872669 0 W/20872669-20872669 FN3845-S SNP C -> G AC=1;AN=190;BQB=0.978334;DP=3479;DP4=1812,1557,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00172463;MQB=5.99418e-06;MQSB=0.993356;RPB=0.598983;SGB=32.5467;VDB=0.535431;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caC|Q396H|1449|LOC_Os11g35590|protein_coding|CODING|LOC_Os11g35590.1|2|1) FN3430-S.SNP.11:20874100 chr11:020874100 0 W/20874100-20874100 FN3430-S SNP T -> A AC=2;AN=184;BQB=0.958869;DP=3051;DP4=1398,1450,22,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.81342e-18;MQSB=0.950286;RPB=0.96803;SGB=83.798;VDB=0.415223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M131L|1449|LOC_Os11g35590|protein_coding|CODING|LOC_Os11g35590.1|1|1) FN-237.SNP.11:20875595 chr11:020875595 0 W/20875595-20875595 FN-237 Single Base Substitution G-T INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN539-S.SNP.11:20880258 chr11:020880258 0 W/20880258-20880258 FN539-S Single Base Substitution C-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN469-S.SNP.11:20881669 chr11:020881669 0 W/20881669-20881669 FN469-S Single Base Substitution T-G INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN3897-S.SNP.11:20882666 chr11:020882666 0 W/20882666-20882666 FN3897-S SNP A -> G AC=2;AN=158;BQB=0.301829;DP=2439;DP4=1122,1169,10,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.87872e-08;MQSB=0.525499;RPB=0.721789;SGB=61.029;VDB=0.683026;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.11:20884623 chr11:020884623 0 W/20884623-20884623 FN2594-S SNP G -> A AC=1;AN=192;BQB=0.654657;DP=3937;DP4=1646,2055,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.002286;MQB=0.152062;MQSB=0.0264807;RPB=0.891643;SGB=25.7687;VDB=0.364597;EFF=INTRON(MODIFIER||||62|LOC_Os11g35610|protein_coding|CODING|LOC_Os11g35610.1|1|1) FN1266-S.SNP.11:20896531 chr11:020896531 0 W/20896531-20896531 FN1266-S Single Base Substitution C-T INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN2666-S.SNP.11:20906425 chr11:020906425 0 W/20906425-20906425 FN2666-S SNP A -> T AC=1;AN=200;BQB=0.967845;DP=5170;DP4=2453,2545,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85705e-10;MQSB=0.942248;RPB=0.867646;SGB=77.2904;VDB=0.634427;EFF=INTERGENIC(MODIFIER||||||||||1) FN1024-S.SNP.11:20908358 chr11:020908358 0 W/20908358-20908358 FN1024-S Single Base Substitution C-A INTERGENIC HOMO SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3743-S.SNP.11:20908367 chr11:020908367 0 W/20908367-20908367 FN3743-S SNP G -> T AC=2;AN=190;BQB=0.773761;DP=2485;DP4=1212,1166,13,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.7163e-09;MQSB=0.839226;RPB=0.935611;SGB=85.5263;VDB=0.948809;EFF=INTERGENIC(MODIFIER||||||||||1) FN2439.SNP.11:20914552 chr11:020914552 0 W/20914552-20914552 FN2439 SNP G -> T AC=2;AN=200;BQB=0.984642;DP=5096;DP4=2546,2125,18,16;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.0251177;MQB=0.778305;MQSB=4.62229e-06;RPB=0.515991;SGB=-3.42751;VDB=0.543907;EFF=INTRON(MODIFIER||||1505|LOC_Os11g35680|protein_coding|CODING|LOC_Os11g35680.1|2|1) FN2364.SNP.11:20918818 chr11:020918818 0 W/20918818-20918818 FN2364 SNP G -> A AC=1;AN=192;BQB=0.657412;DP=5650;DP4=2623,2767,3,10;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0341593;MQB=0.325438;MQSB=0.209461;RPB=0.384373;SGB=18.6565;VDB=0.165646;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V1181I|1505|LOC_Os11g35680|protein_coding|CODING|LOC_Os11g35680.1|4|1) FN952-S.SNP.11:20919997 chr11:020919997 0 W/20919997-20919997 FN952-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g35680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN428-S.SNP.11:20921260 chr11:020921260 0 W/20921260-20921260 FN428-S Single Base Substitution C-G INTERGENIC HOMO SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2436.SNP.11:20921483 chr11:020921483 0 W/20921483-20921483 FN2436 SNP G -> A AC=1;AN=200;BQB=0.871511;DP=3273;DP4=1563,1174,4,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00152765;MQB=6.82615e-05;MQSB=0.875167;RPB=0.998085;SGB=11.2488;VDB=0.534485;EFF=INTERGENIC(MODIFIER||||||||||1) FN-92.SNP.11:20922135 chr11:020922135 0 W/20922135-20922135 FN-92 Single Base Substitution C-G INTERGENIC HET SNo: 92, Mutant_ID: FN-92, Generation: M2, Mutations: 42, Genes: 51, Seed availability: No. FN713-S.SNP.11:20922939 chr11:020922939 0 W/20922939-20922939 FN713-S Single Base Substitution C-T INTERGENIC HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN1109-S.SNP.11:20928646 chr11:020928646 0 W/20928646-20928646 FN1109-S Single Base Substitution G-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2257-S.SNP.11:20932644 chr11:020932644 0 W/20932644-20932644 FN2257-S SNP C -> T AC=2;AN=190;BQB=0.860595;DP=4522;DP4=2068,2066,18,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000221141;MQB=2.22202e-18;MQSB=0.99489;RPB=0.947926;SGB=114.286;VDB=0.960797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R530H|1342|LOC_Os11g35700|protein_coding|CODING|LOC_Os11g35700.1|7|1) FN3804-S.SNP.11:20932858 chr11:020932858 0 W/20932858-20932858 FN3804-S SNP G -> A AC=1;AN=190;BQB=0.928351;DP=3160;DP4=1652,1398,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.26003e-15;MQSB=0.945024;RPB=0.901398;SGB=131.065;VDB=0.416517;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N476|1342|LOC_Os11g35700|protein_coding|CODING|LOC_Os11g35700.1|6|1) FN3431-S.SNP.11:20933742 chr11:020933742 0 W/20933742-20933742 FN3431-S SNP G -> A AC=1;AN=184;BQB=0.768155;DP=3454;DP4=1806,1571,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84688e-07;MQSB=0.993942;RPB=0.925673;SGB=44.2207;VDB=0.997154;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F245|1342|LOC_Os11g35700|protein_coding|CODING|LOC_Os11g35700.1|5|1) FN1186-S.SNP.11:20934593 chr11:020934593 0 W/20934593-20934593 FN1186-S Single Base Substitution A-G INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN867-S.SNP.11:20935465 chr11:020935465 0 W/20935465-20935465 FN867-S Single Base Substitution A-T INTRON HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN-125.SNP.11:20938255 chr11:020938255 0 W/20938255-20938255 FN-125 Single Base Substitution T-A INTERGENIC HOMO SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN4017-S.SNP.11:20938684 chr11:020938684 0 W/20938684-20938684 FN4017-S SNP C -> T AC=1;AN=168;BQB=0.80255;DP=2828;DP4=1449,1243,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.36191e-07;MQSB=0.96031;RPB=0.671285;SGB=51.902;VDB=0.934986;EFF=INTERGENIC(MODIFIER||||||||||1) FN3341-S.SNP.11:20940859 chr11:020940859 0 W/20940859-20940859 FN3341-S SNP A -> T AC=2;AN=184;BQB=0.989988;DP=2824;DP4=1264,1321,8,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.76915e-08;MQSB=0.934773;RPB=0.642137;SGB=28.3187;VDB=0.324037;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.11:20942774 chr11:020942774 0 W/20942774-20942774 FN1313-S Single Base Substitution A-T INTRON HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1094-S.SNP.11:20954566 chr11:020954566 0 W/20954566-20954566 FN1094-S Single Base Substitution A-G INTRON HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN869-S.SNP.11:20965287 chr11:020965287 0 W/20965287-20965287 FN869-S Single Base Substitution A-G INTERGENIC HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN3292-S.SNP.11:20966040 chr11:020966040 0 W/20966040-20966040 FN3292-S SNP C -> T AC=1;AN=184;BQB=0.999168;DP=3089;DP4=1606,1365,10,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.44914e-11;MQSB=0.784908;RPB=0.999679;SGB=60.4004;VDB=0.138089;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.11:20967100 chr11:020967100 0 W/20967100-20967100 FN1460-S Single Base Substitution G-C INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3538-S.SNP.11:20973329 chr11:020973329 0 W/20973329-20973329 FN3538-S SNP T -> G AC=1;AN=188;BQB=0.953633;DP=2528;DP4=1242,1155,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00039557;MQB=3.54681e-06;MQSB=0.999192;RPB=0.915056;SGB=21.8113;VDB=0.529034;EFF=INTERGENIC(MODIFIER||||||||||1) FN3872-S.SNP.11:20978104 chr11:020978104 0 W/20978104-20978104 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.80935;DP=2234;DP4=828,1323,2,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.75278e-08;MQSB=0.847722;RPB=0.54961;SGB=21.4493;VDB=0.37356;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.11:20978926 chr11:020978926 0 W/20978926-20978926 FN953-S Single Base Substitution T-C INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN884-S.SNP.11:20981224 chr11:020981224 0 W/20981224-20981224 FN884-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g35740 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN576-S.SNP.11:20984773 chr11:020984773 0 W/20984773-20984773 FN576-S Single Base Substitution C-G INTERGENIC HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3958-S.SNP.11:20985275 chr11:020985275 0 W/20985275-20985275 FN3958-S SNP C -> T AC=1;AN=168;BQB=0.999482;DP=2618;DP4=1263,1229,15,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.00851e-15;MQSB=0.996412;RPB=0.78306;SGB=100.912;VDB=0.212341;EFF=INTRON(MODIFIER||||224|LOC_Os11g35750|protein_coding|CODING|LOC_Os11g35750.1|1|1) FN2788-S.SNP.11:20988228 chr11:020988228 0 W/20988228-20988228 FN2788-S SNP C -> T AC=2;AN=198;BQB=0.301323;DP=3913;DP4=1864,1820,19,24;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.18821e-20;MQSB=0.760499;RPB=0.982755;SGB=191.998;VDB=0.713743;EFF=INTERGENIC(MODIFIER||||||||||1) FN4113-S.SNP.11:20997633 chr11:020997633 0 W/20997633-20997633 FN4113-S SNP T -> C AC=1;AN=182;BQB=0.999258;DP=2734;DP4=1144,1515,11,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000731529;MQB=3.34497e-12;MQSB=1;RPB=0.454625;SGB=70.7363;VDB=0.491887;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tCt|F720S|723|LOC_Os11g35762|protein_coding|CODING|LOC_Os11g35762.1|9|1) FN2795-S.SNP.11:20998738 chr11:020998738 0 W/20998738-20998738 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.546101;DP=3007;DP4=1823,934,11,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.48342e-09;MQSB=0.997858;RPB=0.755102;SGB=47.3393;VDB=0.888921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1553-S.SNP.11:20999563 chr11:020999563 0 W/20999563-20999563 FN1553-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g35770 retrotransposon protein, putative, unclassified, expressed SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN1315-S.SNP.11:21000810 chr11:021000810 0 W/21000810-21000810 FN1315-S Single Base Substitution C-T INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2094-S.SNP.11:21005867 chr11:021005867 0 W/21005867-21005867 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.996518;DP=1858;DP4=1225,574,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.34474e-10;MQSB=0.881977;RPB=0.0571958;SGB=74.3269;VDB=0.636444;EFF=INTRON(MODIFIER||||129|LOC_Os11g35780|protein_coding|CODING|LOC_Os11g35780.1|1|1) FN1315-S.SNP.11:21007908 chr11:021007908 0 W/21007908-21007908 FN1315-S Single Base Substitution C-A INTERGENIC HET SNo: 1118, Mutant_ID: FN1315-S, Generation: M2, Mutations: 68, Genes: 74, Seed availability: No. FN2663-S.SNP.11:21009832 chr11:021009832 0 W/21009832-21009832 FN2663-S SNP A -> C AC=1;AN=200;BQB=0.999979;DP=4150;DP4=2185,1783,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.02474e-10;MQSB=0.989972;RPB=0.982863;SGB=-11.8999;VDB=0.265355;EFF=INTRON(MODIFIER||||165|LOC_Os11g35790|protein_coding|CODING|LOC_Os11g35790.1|1|1) FN959-S.SNP.11:21010216 chr11:021010216 0 W/21010216-21010216 FN959-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g35790 Leucine rich repeat N-terminal domain containing protein, putative, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN812-S.SNP.11:21011382 chr11:021011382 0 W/21011382-21011382 FN812-S Single Base Substitution T-A INTRON HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1660-S.SNP.11:21011729 chr11:021011729 0 W/21011729-21011729 FN1660-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g35800 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2692-S.SNP.11:21015169 chr11:021015169 0 W/21015169-21015169 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.997108;DP=4933;DP4=2345,2326,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000608149;MQB=6.00969e-12;MQSB=0.766115;RPB=0.680687;SGB=12.7003;VDB=0.246836;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M1127I|1239|LOC_Os11g35800|protein_coding|CODING|LOC_Os11g35800.1|6|1) FN3301-S.SNP.11:21017059 chr11:021017059 0 W/21017059-21017059 FN3301-S SNP A -> G AC=1;AN=184;BQB=0.906473;DP=3188;DP4=1522,1565,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.62521e-10;MQSB=0.984523;RPB=0.674595;SGB=66.8296;VDB=0.0121813;EFF=INTRON(MODIFIER||||586|LOC_Os11g35810|protein_coding|CODING|LOC_Os11g35810.1|1|1) FN689-S.SNP.11:21018611 chr11:021018611 0 W/21018611-21018611 FN689-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN689-S.SNP.11:21018612 chr11:021018612 0 W/21018612-21018612 FN689-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g35810 expressed protein SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN3384-S.SNP.11:21018922 chr11:021018922 0 W/21018922-21018922 FN3384-S SNP G -> T AC=1;AN=184;BQB=0.721104;DP=2834;DP4=1341,1399,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.81111e-07;MQSB=0.998698;RPB=0.698856;SGB=32.2261;VDB=0.965649;EFF=INTRON(MODIFIER||||586|LOC_Os11g35810|protein_coding|CODING|LOC_Os11g35810.1|4|1) FN3365-S.SNP.11:21022515 chr11:021022515 0 W/21022515-21022515 FN3365-S SNP G -> A AC=1;AN=184;BQB=0.937053;DP=2735;DP4=1251,1387,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.35788e-11;MQSB=0.999747;RPB=0.611349;SGB=56.8786;VDB=0.962235;EFF=INTERGENIC(MODIFIER||||||||||1) FN-145.SNP.11:21026551 chr11:021026551 0 W/21026551-21026551 FN-145 Single Base Substitution G-A INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-145.SNP.11:21026552 chr11:021026552 0 W/21026552-21026552 FN-145 Single Base Substitution G-A INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-163.SNP.11:21033352 chr11:021033352 0 W/21033352-21033352 FN-163 Single Base Substitution G-T STOP_GAINED HET LOC_Os11g35840 expressed protein SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN501-S.SNP.11:21036215 chr11:021036215 0 W/21036215-21036215 FN501-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN1153-S.SNP.11:21036582 chr11:021036582 0 W/21036582-21036582 FN1153-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g35840 expressed protein SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN-68.SNP.11:21044249 chr11:021044249 0 W/21044249-21044249 FN-68 Single Base Substitution C-G INTERGENIC HOMO SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN487-S.SNP.11:21044249 chr11:021044249 0 W/21044249-21044249 FN487-S Single Base Substitution C-G INTERGENIC HOMO SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN_827-1.SNP.11:21044249 chr11:021044249 0 W/21044249-21044249 FN_827-1 Single Base Substitution C-G HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN1748-S.SNP.11:21045317 chr11:021045317 0 W/21045317-21045317 FN1748-S SNP C -> A AC=1;AN=188;BQB=0.749037;DP=3499;DP4=1509,1957,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.77001e-09;MQSB=0.969649;RPB=0.931666;SGB=5.5382;VDB=0.632975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.11:21046141 chr11:021046141 0 W/21046141-21046141 FN3343-S SNP A -> G AC=2;AN=184;BQB=0.99051;DP=3057;DP4=1456,1479,21,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.25092e-27;MQSB=0.930347;RPB=0.571253;SGB=98.9287;VDB=0.361892;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.11:21050437 chr11:021050437 0 W/21050437-21050437 FN1540-S Single Base Substitution A-G INTERGENIC Homo SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN4234-S.SNP.11:21060465 chr11:021060465 0 W/21060465-21060465 FN4234-S SNP T -> A AC=1;AN=170;BQB=0.987511;DP=2276;DP4=1076,1148,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.50028e-06;MQSB=0.996861;RPB=0.711801;SGB=43.4296;VDB=0.041198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2138-S.SNP.11:21073679 chr11:021073679 0 W/21073679-21073679 FN2138-S SNP G -> T AC=1;AN=168;BQB=0.593763;DP=3098;DP4=1092,1970,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=25;MQ0F=0.039703;MQB=0.649001;MQSB=1.42179e-10;RPB=0.775625;SGB=15.6372;VDB=0.216467;EFF=INTRON(MODIFIER||||1503|LOC_Os11g35880|protein_coding|CODING|LOC_Os11g35880.1|2|1) FN1280-S.SNP.11:21074471 chr11:021074471 0 W/21074471-21074471 FN1280-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g35880 transposon protein, putative, unclassified, expressed SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN3368-S.SNP.11:21074471 chr11:021074471 0 W/21074471-21074471 FN3368-S SNP C -> T AC=1;AN=184;BQB=0.924585;DP=3807;DP4=2296,1422,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=18;MQ0F=0.280799;MQB=0.0631093;MQSB=0;RPB=0.752697;SGB=46.3132;VDB=0.167305;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S904F|1503|LOC_Os11g35880|protein_coding|CODING|LOC_Os11g35880.1|5|1) FN3434-S.SNP.11:21074471 chr11:021074471 0 W/21074471-21074471 FN3434-S SNP C -> T AC=2;AN=184;BQB=0.992385;DP=3779;DP4=2209,1457,20,7;HOB=0.0215028;ICB=0.494625;MQ=18;MQ0F=0.28579;MQB=0.321129;MQSB=0;RPB=0.288752;SGB=116.569;VDB=0.0333765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S904F|1503|LOC_Os11g35880|protein_coding|CODING|LOC_Os11g35880.1|5|1) FN4094-S.SNP.11:21074471 chr11:021074471 0 W/21074471-21074471 FN4094-S SNP C -> T AC=2;AN=182;BQB=0.778414;DP=3398;DP4=2015,1297,17,19;HOB=0.0217365;ICB=0.494567;MQ=20;MQ0F=0.252207;MQB=0.00116481;MQSB=0;RPB=0.99473;SGB=156.883;VDB=0.898419;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S904F|1503|LOC_Os11g35880|protein_coding|CODING|LOC_Os11g35880.1|5|1) FN489-S.SNP.11:21074471 chr11:021074471 0 W/21074471-21074471 FN489-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g35880 transposon protein, putative, unclassified, expressed SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN-402.SNP.11:21081019 chr11:021081019 0 W/21081019-21081019 FN-402 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g35890 leucine rich repeat protein, putative, expressed SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN-402.SNP.11:21081020 chr11:021081020 0 W/21081020-21081020 FN-402 Single Base Substitution T-A SYNONYMOUS_CODING HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN574-S.SNP.11:21083841 chr11:021083841 0 W/21083841-21083841 FN574-S Single Base Substitution G-T INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN1069-S.SNP.11:21084573 chr11:021084573 0 W/21084573-21084573 FN1069-S Single Base Substitution C-G INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2785-S.SNP.11:21087054 chr11:021087054 0 W/21087054-21087054 FN2785-S SNP A -> C AC=1;AN=198;BQB=0.969215;DP=4269;DP4=2040,2013,15,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.2501e-08;MQSB=0.420295;RPB=0.303135;SGB=58.1246;VDB=0.101244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.11:21088561 chr11:021088561 0 W/21088561-21088561 FN2214-S SNP T -> G AC=2;AN=190;BQB=0.0168166;DP=4770;DP4=2050,2253,33,17;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=3.07981e-14;MQSB=0.00761998;RPB=0.345342;SGB=113.045;VDB=0.149437;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A118|893|LOC_Os11g35910|protein_coding|CODING|LOC_Os11g35910.1|2|1) FN1556-S.SNP.11:21092149 chr11:021092149 0 W/21092149-21092149 FN1556-S Single Base Substitution C-T INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN534-S.SNP.11:21094393 chr11:021094393 0 W/21094393-21094393 FN534-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g35920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN3799-S.SNP.11:21099590 chr11:021099590 0 W/21099590-21099590 FN3799-S SNP G -> T AC=1;AN=190;BQB=0.929604;DP=2386;DP4=1353,960,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00021199;MQSB=0.989713;RPB=0.954572;SGB=30.8803;VDB=0.538025;EFF=INTRON(MODIFIER||||1700|LOC_Os11g35920|protein_coding|CODING|LOC_Os11g35920.1|3|1) FN1009-S.SNP.11:21099731 chr11:021099731 0 W/21099731-21099731 FN1009-S Single Base Substitution A-C INTRON HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3555-S.SNP.11:21101144 chr11:021101144 0 W/21101144-21101144 FN3555-S SNP C -> T AC=1;AN=188;BQB=0.923209;DP=2432;DP4=1131,1239,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44583e-11;MQSB=0.92712;RPB=0.894454;SGB=94.4119;VDB=0.233936;EFF=INTRON(MODIFIER||||1700|LOC_Os11g35920|protein_coding|CODING|LOC_Os11g35920.1|3|1) FN3707-S.SNP.11:21111007 chr11:021111007 0 W/21111007-21111007 FN3707-S SNP T -> A AC=1;AN=190;BQB=0.97443;DP=2915;DP4=1283,1524,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0102916;MQB=0.480774;MQSB=1.01699e-06;RPB=0.996152;SGB=44.5415;VDB=0.818303;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I754N|1009|LOC_Os11g35940|protein_coding|CODING|LOC_Os11g35940.1|5|1) FN1735-S.SNP.11:21113191 chr11:021113191 0 W/21113191-21113191 FN1735-S SNP A -> T AC=1;AN=188;BQB=0.895726;DP=3681;DP4=1995,1644,20,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.30207e-15;MQSB=0.985726;RPB=0.555615;SGB=-9.02352;VDB=0.826551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.11:21119020 chr11:021119020 0 W/21119020-21119020 FN3493-S SNP T -> C AC=2;AN=184;BQB=0.598298;DP=4595;DP4=2522,1776,26,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.02793e-28;MQSB=0.739687;RPB=0.965875;SGB=169.576;VDB=0.996975;EFF=INTRON(MODIFIER||||270|LOC_Os11g35950|protein_coding|CODING|LOC_Os11g35950.1|1|1) FN2594-S.SNP.11:21121574 chr11:021121574 0 W/21121574-21121574 FN2594-S SNP T -> A AC=1;AN=198;BQB=0.950714;DP=4334;DP4=2144,1996,7,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.44027e-08;MQSB=0.963221;RPB=0.996623;SGB=67.9293;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN1297-S.SNP.11:21125400 chr11:021125400 0 W/21125400-21125400 FN1297-S Single Base Substitution A-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN985-S.SNP.11:21126980 chr11:021126980 0 W/21126980-21126980 FN985-S Single Base Substitution A-G INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN-245.SNP.11:21132362 chr11:021132362 0 W/21132362-21132362 FN-245 Single Base Substitution G-A INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN343-S.SNP.11:21142354 chr11:021142354 0 W/21142354-21142354 FN343-S Single Base Substitution C-T INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN2243-S.SNP.11:21146044 chr11:021146044 0 W/21146044-21146044 FN2243-S SNP G -> A AC=1;AN=190;BQB=0.840308;DP=4747;DP4=2213,2166,17,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.04678e-13;MQSB=0.998552;RPB=0.442991;SGB=19.6499;VDB=0.952342;EFF=UTR_5_PRIME(MODIFIER||1502||383|LOC_Os11g35980|protein_coding|CODING|LOC_Os11g35980.1|1|1) FN3439-S.SNP.11:21151301 chr11:021151301 0 W/21151301-21151301 FN3439-S SNP A -> C AC=2;AN=184;BQB=0.286781;DP=2777;DP4=1295,1329,12,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.74513e-16;MQSB=0.60747;RPB=0.329611;SGB=81.5311;VDB=0.0601088;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.11:21151999 chr11:021151999 0 W/21151999-21151999 FN3871-S SNP A -> T AC=2;AN=158;BQB=0.879737;DP=2296;DP4=995,1125,9,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.32622e-11;MQSB=0.229729;RPB=0.852309;SGB=45.1437;VDB=0.417724;EFF=INTERGENIC(MODIFIER||||||||||1) FN3880-S.SNP.11:21165361 chr11:021165361 0 W/21165361-21165361 FN3880-S SNP A -> T AC=1;AN=158;BQB=0.916468;DP=1652;DP4=689,772,10,4;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=2.71892e-05;MQSB=0.00106358;RPB=0.845945;SGB=19.0798;VDB=0.0509571;EFF=INTRON(MODIFIER||||156|LOC_Os11g36010|protein_coding|CODING|LOC_Os11g36010.1|2|1) FN3756-S.SNP.11:21167662 chr11:021167662 0 W/21167662-21167662 FN3756-S SNP G -> A AC=1;AN=190;BQB=0.89692;DP=1851;DP4=749,941,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00294538;MQSB=0.453212;RPB=0.921403;SGB=26.3271;VDB=0.173752;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.11:21168940 chr11:021168940 0 W/21168940-21168940 FN-288 Single Base Substitution C-T INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2197-S.SNP.11:21168940 chr11:021168940 0 W/21168940-21168940 FN2197-S SNP C -> T AC=2;AN=190;BQB=0.129857;DP=3606;DP4=1795,1542,9,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=6.49575e-07;MQSB=0.946985;RPB=0.550461;SGB=23.6597;VDB=0.155601;EFF=INTERGENIC(MODIFIER||||||||||1) FN967-S.SNP.11:21168940 chr11:021168940 0 W/21168940-21168940 FN967-S Single Base Substitution C-T INTERGENIC HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN-188.SNP.11:21174328 chr11:021174328 0 W/21174328-21174328 FN-188 Single Base Substitution G-T INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1314-S.SNP.11:21179005 chr11:021179005 0 W/21179005-21179005 FN1314-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN812-S.SNP.11:21179494 chr11:021179494 0 W/21179494-21179494 FN812-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g36030 protein binding protein, putative, expressed SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1037-S.SNP.11:21184481 chr11:021184481 0 W/21184481-21184481 FN1037-S Single Base Substitution C-A INTERGENIC HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN3476-S.SNP.11:21184824 chr11:021184824 0 W/21184824-21184824 FN3476-S SNP A -> G AC=1;AN=184;BQB=0.986909;DP=2301;DP4=957,1282,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66704e-07;MQSB=0.929908;RPB=0.899222;SGB=53.2642;VDB=0.557653;EFF=INTERGENIC(MODIFIER||||||||||1) W577-3-1.SNP.11:21188575 chr11:021188575 0 W/21188575-21188575 W577-3-1 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN1290-S.SNP.11:21192223 chr11:021192223 0 W/21192223-21192223 FN1290-S Single Base Substitution T-C INTRON HOMO SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN2785-S.SNP.11:21201812 chr11:021201812 0 W/21201812-21201812 FN2785-S SNP A -> C AC=1;AN=198;BQB=0.999883;DP=4099;DP4=1713,2144,2,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000243962;MQB=1.55892e-08;MQSB=0.999799;RPB=0.35973;SGB=54.144;VDB=0.67027;EFF=INTRON(MODIFIER||||549|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.1|1|1),INTRON(MODIFIER||||446|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.4|1|1),INTRON(MODIFIER||||143|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.5|1|1),INTRON(MODIFIER||||134|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.6|1|1),INTRON(MODIFIER||||134|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.7|1|1) FN2771-S.SNP.11:21205721 chr11:021205721 0 W/21205721-21205721 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.987148;DP=4301;DP4=2068,1986,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.91921e-12;MQSB=0.983486;RPB=0.996229;SGB=58.1246;VDB=0.586144;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D296|549|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.1|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D296|549|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.2|10|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D296|549|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.3|9|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D193|446|LOC_Os11g36070|protein_coding|CODING|LOC_Os11g36070.4|10|1) FN-56.SNP.11:21209623 chr11:021209623 0 W/21209623-21209623 FN-56 Single Base Substitution C-A INTERGENIC HOMO SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN1402-S.SNP.11:21215932 chr11:021215932 0 W/21215932-21215932 FN1402-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g36090 receptor kinase, putative, expressed SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN774-S.SNP.11:21227400 chr11:021227400 0 W/21227400-21227400 FN774-S Single Base Substitution C-T INTRON HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3740-S.SNP.11:21228000 chr11:021228000 0 W/21228000-21228000 FN3740-S SNP A -> T AC=1;AN=190;BQB=0.0144234;DP=2534;DP4=1033,1014,14,4;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00434096;MQB=0.222586;MQSB=2.03727e-09;RPB=0.248243;SGB=-126.519;VDB=0.0211181;EFF=INTRON(MODIFIER||||1133|LOC_Os11g36110|protein_coding|CODING|LOC_Os11g36110.1|1|1) FN2706-S.SNP.11:21233567 chr11:021233567 0 W/21233567-21233567 FN2706-S SNP A -> T AC=1;AN=200;BQB=0.29764;DP=5126;DP4=2568,2353,12,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32132e-17;MQSB=0.868727;RPB=0.754291;SGB=63.3521;VDB=0.325098;EFF=STOP_GAINED(HIGH|NONSENSE|tTg/tAg|L447*|755|LOC_Os11g36120|protein_coding|CODING|LOC_Os11g36120.1|2|1) FN1103-S.SNP.11:21233703 chr11:021233703 0 W/21233703-21233703 FN1103-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g36120 receptor-like protein kinase precursor, putative, expressed SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3389-S.SNP.11:21240146 chr11:021240146 0 W/21240146-21240146 FN3389-S SNP A -> G AC=1;AN=184;BQB=0.998507;DP=2662;DP4=1186,1340,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.89047e-06;MQSB=0.96986;RPB=0.836513;SGB=28.7043;VDB=0.30635;EFF=INTERGENIC(MODIFIER||||||||||1) FN756-S.SNP.11:21242561 chr11:021242561 0 W/21242561-21242561 FN756-S Single Base Substitution A-G INTERGENIC HOMO SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN-91.SNP.11:21247051 chr11:021247051 0 W/21247051-21247051 FN-91 Single Base Substitution T-A INTERGENIC HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN-281.SNP.11:21247129 chr11:021247129 0 W/21247129-21247129 FN-281 Single Base Substitution T-A INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1727-S.SNP.11:21255017 chr11:021255017 0 W/21255017-21255017 FN1727-S SNP T -> A AC=2;AN=188;BQB=0.973815;DP=2750;DP4=1215,1480,17,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.2492e-17;MQSB=0.970704;RPB=0.185548;SGB=-80.8397;VDB=0.131137;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.11:21255973 chr11:021255973 0 W/21255973-21255973 FN2639-S SNP G -> A AC=2;AN=200;BQB=0.349001;DP=5060;DP4=2244,2489,27,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.99906e-40;MQSB=0.550242;RPB=0.144417;SGB=216.923;VDB=0.0467428;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.11:21255976 chr11:021255976 0 W/21255976-21255976 FN2639-S SNP A -> G AC=2;AN=200;BQB=0.606647;DP=5077;DP4=2298,2514,28,36;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.59695e-39;MQSB=0.859138;RPB=0.0646866;SGB=220.528;VDB=0.027076;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.11:21256201 chr11:021256201 0 W/21256201-21256201 FN882-S Single Base Substitution C-G INTERGENIC HOMO SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN1724-S.SNP.11:21258125 chr11:021258125 0 W/21258125-21258125 FN1724-S SNP C -> A AC=1;AN=188;BQB=0.821195;DP=3924;DP4=2229,1635,14,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.43788e-14;MQSB=0.997993;RPB=0.57624;SGB=-42.845;VDB=0.536796;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.11:21261696 chr11:021261696 0 W/21261696-21261696 FN2365 SNP C -> G AC=1;AN=192;BQB=0.991647;DP=4922;DP4=2324,2309,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203169;MQB=1.01448e-14;MQSB=0.910722;RPB=0.878657;SGB=62.2505;VDB=0.666625;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G989A|1102|LOC_Os11g36160|protein_coding|CODING|LOC_Os11g36160.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gCa|G181A|294|LOC_Os11g36160|protein_coding|CODING|LOC_Os11g36160.2|2|1) FN896-S.SNP.11:21265001 chr11:021265001 0 W/21265001-21265001 FN896-S Single Base Substitution C-T INTRON HET SNo: 802, Mutant_ID: FN896-S, Generation: M2, Mutations: 63, Genes: 68, Seed availability: Yes. FN2365.SNP.11:21265284 chr11:021265284 0 W/21265284-21265284 FN2365 SNP A -> T AC=1;AN=192;BQB=0.0207021;DP=4574;DP4=1873,2126,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.77103e-10;MQSB=0.60052;RPB=0.833821;SGB=-108.11;VDB=0.499469;EFF=SYNONYMOUS_CODING(LOW|SILENT|atT/atA|I172|1102|LOC_Os11g36160|protein_coding|CODING|LOC_Os11g36160.1|1|1),INTRON(MODIFIER||||294|LOC_Os11g36160|protein_coding|CODING|LOC_Os11g36160.2|1|1) FN429-S.SNP.11:21272719 chr11:021272719 0 W/21272719-21272719 FN429-S Single Base Substitution C-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN_830-6-1.SNP.11:21279255 chr11:021279255 0 W/21279255-21279255 FN_830-6-1 Single Base Substitution A-T HET SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN1662-S.SNP.11:21282244 chr11:021282244 0 W/21282244-21282244 FN1662-S Single Base Substitution G-A INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN2340.SNP.11:21282244 chr11:021282244 0 W/21282244-21282244 FN2340 SNP G -> A AC=2;AN=192;BQB=0.934047;DP=4969;DP4=2510,1941,24,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.8085e-20;MQSB=0.990942;RPB=0.94109;SGB=-0.659969;VDB=0.753496;EFF=INTERGENIC(MODIFIER||||||||||1) FN1319-S.SNP.11:21295283 chr11:021295283 0 W/21295283-21295283 FN1319-S Single Base Substitution C-G INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2091-S.SNP.11:21295364 chr11:021295364 0 W/21295364-21295364 FN2091-S SNP T -> A AC=1;AN=168;BQB=0.346908;DP=957;DP4=601,280,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000761665;MQSB=0.820284;RPB=0.424501;SGB=26.905;VDB=0.00328447;EFF=INTERGENIC(MODIFIER||||||||||1) FN512-S.SNP.11:21297944 chr11:021297944 0 W/21297944-21297944 FN512-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 510, Mutant_ID: FN512-S, Generation: M2, Mutations: 77, Genes: 29, Seed availability: Yes. FN1014-S.SNP.11:21305594 chr11:021305594 0 W/21305594-21305594 FN1014-S Single Base Substitution C-A INTERGENIC HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1162-S.SNP.11:21306744 chr11:021306744 0 W/21306744-21306744 FN1162-S Single Base Substitution T-C INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3494-S.SNP.11:21306961 chr11:021306961 0 W/21306961-21306961 FN3494-S SNP C -> T AC=1;AN=184;BQB=0.827189;DP=3796;DP4=1598,2058,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.0123815;MQB=0.0135127;MQSB=0.0232742;RPB=0.665765;SGB=35.7479;VDB=0.831517;EFF=INTERGENIC(MODIFIER||||||||||1) FN4180-S.SNP.11:21312903 chr11:021312903 0 W/21312903-21312903 FN4180-S SNP G -> A AC=2;AN=170;BQB=0.786427;DP=2613;DP4=1268,1263,10,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0.000382702;MQB=7.89822e-11;MQSB=0.995246;RPB=0.659013;SGB=62.4192;VDB=0.35668;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1075*|1668|LOC_Os11g36220|protein_coding|CODING|LOC_Os11g36220.1|5|1);LOF=(LOC_Os11g36220|LOC_Os11g36220|1|1.00);NMD=(LOC_Os11g36220|LOC_Os11g36220|1|1.00) FN2185-S.SNP.11:21315664 chr11:021315664 0 W/21315664-21315664 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.1678;DP=4169;DP4=2210,1690,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.27557e-07;MQSB=0.842818;RPB=0.741667;SGB=39.6545;VDB=0.793023;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L282|1668|LOC_Os11g36220|protein_coding|CODING|LOC_Os11g36220.1|2|1) FN-356.SNP.11:21321827 chr11:021321827 0 W/21321827-21321827 FN-356 Single Base Substitution G-A INTERGENIC HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3306-S.SNP.11:21321892 chr11:021321892 0 W/21321892-21321892 FN3306-S SNP G -> T AC=1;AN=184;BQB=0.73145;DP=2137;DP4=1056,813,7,2;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000467946;MQB=0.0110942;MQSB=4.11505e-41;RPB=0.222652;SGB=35.1773;VDB=0.00108593;EFF=INTERGENIC(MODIFIER||||||||||1) FN3994-S.SNP.11:21323131 chr11:021323131 0 W/21323131-21323131 FN3994-S SNP G -> A AC=1;AN=168;BQB=0.0845426;DP=2839;DP4=1340,1320,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000352237;MQB=7.0872e-05;MQSB=0.101298;RPB=0.64033;SGB=2.75988;VDB=0.996621;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.11:21323836 chr11:021323836 0 W/21323836-21323836 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.466919;DP=3160;DP4=1649,1390,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.60783e-09;MQSB=0.949203;RPB=0.999842;SGB=25.7969;VDB=0.178899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.11:21326365 chr11:021326365 0 W/21326365-21326365 FN3810-S SNP C -> T AC=2;AN=190;BQB=0.972799;DP=2581;DP4=1095,1402,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.20464e-08;MQSB=0.966224;RPB=0.580562;SGB=50.3161;VDB=0.104747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.11:21328438 chr11:021328438 0 W/21328438-21328438 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3319-S.SNP.11:21330742 chr11:021330742 0 W/21330742-21330742 FN3319-S SNP C -> T AC=1;AN=184;BQB=0.399996;DP=3595;DP4=2174,1245,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50853e-07;MQSB=0.112211;RPB=0.865995;SGB=63.9222;VDB=0.950121;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.11:21332729 chr11:021332729 0 W/21332729-21332729 FN_812-4-1 Single Base Substitution G-T HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN2442.SNP.11:21333958 chr11:021333958 0 W/21333958-21333958 FN2442 SNP A -> G AC=2;AN=200;BQB=0.948808;DP=4660;DP4=2183,2037,19,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.54139e-21;MQSB=0.997689;RPB=0.643041;SGB=130.399;VDB=0.684686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.11:21334766 chr11:021334766 0 W/21334766-21334766 FN2344 SNP C -> A AC=2;AN=192;BQB=0.920913;DP=4885;DP4=2237,2387,29,33;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000204708;MQB=1.98526e-36;MQSB=0.89041;RPB=0.901422;SGB=210.869;VDB=0.331747;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.11:21335200 chr11:021335200 0 W/21335200-21335200 FN-207 Single Base Substitution G-A INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3432-S.SNP.11:21339723 chr11:021339723 0 W/21339723-21339723 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.95897;DP=3079;DP4=1422,1530,16,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.34418e-11;MQSB=0.517493;RPB=0.97589;SGB=93.9603;VDB=0.87448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.11:21354702 chr11:021354702 0 W/21354702-21354702 FN3714-S SNP C -> T AC=2;AN=190;BQB=0.923875;DP=3115;DP4=1279,1686,20,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.88619e-33;MQSB=0.942175;RPB=0.985858;SGB=195.177;VDB=0.990193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.11:21354703 chr11:021354703 0 W/21354703-21354703 FN3714-S SNP C -> T AC=2;AN=190;BQB=0.96782;DP=3117;DP4=1250,1725,21,33;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.59684e-33;MQSB=0.960449;RPB=0.95135;SGB=203.28;VDB=0.968902;EFF=INTERGENIC(MODIFIER||||||||||1) FN1123-S.SNP.11:21356915 chr11:021356915 0 W/21356915-21356915 FN1123-S Single Base Substitution A-T INTRON HOMO SNo: 995, Mutant_ID: FN1123-S, Generation: M2, Mutations: 61, Genes: 40, Seed availability: Yes. FN_N1-116-1.SNP.11:21360636 chr11:021360636 0 W/21360636-21360636 FN_N1-116-1 Single Base Substitution C-T HET SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2295.SNP.11:21364425 chr11:021364425 0 W/21364425-21364425 FN2295 SNP G -> A AC=1;AN=192;BQB=0.276945;DP=4751;DP4=2402,1954,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000210482;MQB=2.19408e-08;MQSB=0.997098;RPB=0.555176;SGB=34.0426;VDB=0.446021;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A443V|1791|LOC_Os11g36280|protein_coding|CODING|LOC_Os11g36280.1|7|1) FN3727-S.SNP.11:21375365 chr11:021375365 0 W/21375365-21375365 FN3727-S SNP G -> A AC=1;AN=190;BQB=0.985111;DP=1693;DP4=765,833,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1599e-06;MQSB=0.123356;RPB=0.529216;SGB=28.9929;VDB=0.783668;EFF=INTRON(MODIFIER||||228|LOC_Os11g36300|protein_coding|CODING|LOC_Os11g36300.1|1|1) FN2675-S.SNP.11:21394906 chr11:021394906 0 W/21394906-21394906 FN2675-S SNP T -> A AC=1;AN=200;BQB=0.774257;DP=4830;DP4=2402,2212,17,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.33747e-16;MQSB=0.975468;RPB=0.326251;SGB=58.1418;VDB=0.0122525;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.11:21395155 chr11:021395155 0 W/21395155-21395155 FN962-S Single Base Substitution G-T INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2438.SNP.11:21397175 chr11:021397175 0 W/21397175-21397175 FN2438 SNP T -> C AC=1;AN=200;BQB=0.990436;DP=4897;DP4=2031,2555,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.73656e-07;MQSB=0.951669;RPB=0.895746;SGB=47.4799;VDB=0.443267;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.11:21400801 chr11:021400801 0 W/21400801-21400801 FN928-S Single Base Substitution A-G INTERGENIC HET SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN1525-S.SNP.11:21400846 chr11:021400846 0 W/21400846-21400846 FN1525-S Single Base Substitution C-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN-411.SNP.11:21404841 chr11:021404841 0 W/21404841-21404841 FN-411 Single Base Substitution C-T INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN411-S.SNP.11:21404841 chr11:021404841 0 W/21404841-21404841 FN411-S Single Base Substitution C-T INTERGENIC HOMO SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN940-S.SNP.11:21409926 chr11:021409926 0 W/21409926-21409926 FN940-S Single Base Substitution A-T INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN997-S.SNP.11:21412110 chr11:021412110 0 W/21412110-21412110 FN997-S Single Base Substitution G-C INTERGENIC HET SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN3554-S.SNP.11:21412844 chr11:021412844 0 W/21412844-21412844 FN3554-S SNP T -> A AC=1;AN=188;BQB=0.909013;DP=2497;DP4=1412,1027,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.43576e-06;MQSB=0.943446;RPB=0.975814;SGB=28.8977;VDB=0.720456;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.11:21417941 chr11:021417941 0 W/21417941-21417941 FN1540-S Single Base Substitution T-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3424-S.SNP.11:21421525 chr11:021421525 0 W/21421525-21421525 FN3424-S SNP T -> C AC=1;AN=184;BQB=0.731864;DP=3457;DP4=1762,1533,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=30;MQ0F=0.131328;MQB=0.755795;MQSB=0;RPB=0.988511;SGB=15.9331;VDB=0.694845;EFF=INTRON(MODIFIER||||960|LOC_Os11g36360|protein_coding|CODING|LOC_Os11g36360.1|1|1) FN1217-S.SNP.11:21421620 chr11:021421620 0 W/21421620-21421620 FN1217-S Single Base Substitution C-T INTRON HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN-192.SNP.11:21429059 chr11:021429059 0 W/21429059-21429059 FN-192 Single Base Substitution G-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN3364-S.SNP.11:21431632 chr11:021431632 0 W/21431632-21431632 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.991174;DP=3254;DP4=1738,1425,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.0786724;MQB=0.999996;MQSB=0.505882;RPB=0.866131;SGB=57.786;VDB=0.768163;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R355|896|LOC_Os11g36370|protein_coding|CODING|LOC_Os11g36370.1|3|1) FN3796-S.SNP.11:21432791 chr11:021432791 0 W/21432791-21432791 FN3796-S SNP G -> A AC=1;AN=190;BQB=0.999332;DP=2876;DP4=1518,1275,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0107789;MQB=0.00586757;MQSB=0.128761;RPB=0.99589;SGB=36.1006;VDB=0.0870733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G742S|896|LOC_Os11g36370|protein_coding|CODING|LOC_Os11g36370.1|3|1) FN2122-S.SNP.11:21436071 chr11:021436071 0 W/21436071-21436071 FN2122-S SNP C -> T AC=1;AN=168;BQB=0.827346;DP=1584;DP4=711,834,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0189394;MQB=0.307368;MQSB=1.46641e-06;RPB=0.933825;SGB=22.1847;VDB=0.0608455;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R1300K|1837|LOC_Os11g36380|protein_coding|CODING|LOC_Os11g36380.1|2|1) FN2625-S.SNP.11:21436326 chr11:021436326 0 W/21436326-21436326 FN2625-S SNP G -> T AC=1;AN=200;BQB=0.998196;DP=3986;DP4=1726,2012,10,11;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0722529;MQB=0.843499;MQSB=1.24997e-21;RPB=0.940409;SGB=91.1059;VDB=0.157172;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1215H|1837|LOC_Os11g36380|protein_coding|CODING|LOC_Os11g36380.1|2|1) FN1338-S.SNP.11:21437792 chr11:021437792 0 W/21437792-21437792 FN1338-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3710-S.SNP.11:21439604 chr11:021439604 0 W/21439604-21439604 FN3710-S SNP C -> G AC=1;AN=190;BQB=0.801898;DP=2578;DP4=1275,1243,10,2;HOB=5.54017e-05;ICB=0.000111386;MQ=29;MQ0F=0.210628;MQB=0.637375;MQSB=0.603601;RPB=0.185087;SGB=49.0954;VDB=0.40601;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A146|1837|LOC_Os11g36380|protein_coding|CODING|LOC_Os11g36380.1|1|1) FN3534-S.SNP.11:21439892 chr11:021439892 0 W/21439892-21439892 FN3534-S SNP G -> A AC=1;AN=188;BQB=0.999379;DP=4637;DP4=1976,2573,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0.100065;MQB=0.959176;MQSB=4.46705e-24;RPB=0.620107;SGB=60.7873;VDB=0.268937;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S50|1837|LOC_Os11g36380|protein_coding|CODING|LOC_Os11g36380.1|1|1) FN4305-S.SNP.11:21441025 chr11:021441025 0 W/21441025-21441025 FN4305-S SNP A -> T AC=1;AN=170;BQB=0.0104791;DP=1851;DP4=976,594,8,18;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0810373;MQB=0.879621;MQSB=0;RPB=0.760065;SGB=-133.425;VDB=0.690996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.11:21445725 chr11:021445725 0 W/21445725-21445725 FN3921-S SNP G -> A AC=2;AN=158;BQB=0.625422;DP=2410;DP4=1139,1163,8,23;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.12156e-16;MQSB=0.99395;RPB=0.635743;SGB=94.7235;VDB=0.630387;EFF=INTRON(MODIFIER||||1021|LOC_Os11g36390|protein_coding|CODING|LOC_Os11g36390.1|7|1) FN2554-S.SNP.11:21447951 chr11:021447951 0 W/21447951-21447951 FN2554-S SNP A -> G AC=1;AN=198;BQB=0.397603;DP=3717;DP4=1712,1782,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.39927e-14;MQSB=0.90451;RPB=0.552173;SGB=-38.26;VDB=0.594814;EFF=INTRON(MODIFIER||||1021|LOC_Os11g36390|protein_coding|CODING|LOC_Os11g36390.1|13|1) FN897-S.SNP.11:21454551 chr11:021454551 0 W/21454551-21454551 FN897-S Single Base Substitution C-A INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN3484-S.SNP.11:21457215 chr11:021457215 0 W/21457215-21457215 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.96553;DP=2385;DP4=1205,1086,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.72749e-07;MQSB=0.957598;RPB=0.956227;SGB=44.2207;VDB=0.550602;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.11:21457728 chr11:021457728 0 W/21457728-21457728 FN-157 Single Base Substitution T-C INTERGENIC HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN4175-S.SNP.11:21465206 chr11:021465206 0 W/21465206-21465206 FN4175-S SNP A -> T AC=1;AN=170;BQB=0.211445;DP=2312;DP4=927,1281,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.95134e-05;MQSB=0.886068;RPB=0.635164;SGB=22.3266;VDB=0.719175;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.11:21482698 chr11:021482698 0 W/21482698-21482698 FN-190 Single Base Substitution A-T INTRON HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN736-S.SNP.11:21489251 chr11:021489251 0 W/21489251-21489251 FN736-S Single Base Substitution G-A INTRON HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN-30.SNP.11:21493015 chr11:021493015 0 W/21493015-21493015 FN-30 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN1112-S.SNP.11:21495545 chr11:021495545 0 W/21495545-21495545 FN1112-S Single Base Substitution A-G INTRON HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN410-S.SNP.11:21507584 chr11:021507584 0 W/21507584-21507584 FN410-S Single Base Substitution T-A INTRON HET SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN931-S.SNP.11:21510258 chr11:021510258 0 W/21510258-21510258 FN931-S Single Base Substitution T-G INTRON HOMO SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2688-S.SNP.11:21514794 chr11:021514794 0 W/21514794-21514794 FN2688-S SNP A -> G AC=1;AN=200;BQB=0.963997;DP=4901;DP4=2519,2132,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.32137e-08;MQSB=0.963006;RPB=0.0519451;SGB=47.4799;VDB=0.0811354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.11:21531936 chr11:021531936 0 W/21531936-21531936 FN3369-S SNP C -> G AC=1;AN=184;BQB=0.762549;DP=3380;DP4=1430,1807,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.50599e-14;MQSB=0.956825;RPB=0.331952;SGB=98.4821;VDB=0.369399;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.11:21532447 chr11:021532447 0 W/21532447-21532447 FN3777-S SNP C -> T AC=1;AN=190;BQB=0.806662;DP=2809;DP4=1238,1461,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.94613e-12;MQSB=0.029945;RPB=0.919893;SGB=38.983;VDB=0.0138266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.11:21537132 chr11:021537132 0 W/21537132-21537132 FN1214-S Single Base Substitution C-T SPLICE_SITE_ACCEPTOR HET LOC_Os11g36500 retrotransposon protein, putative, unclassified, expressed SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2734-S.SNP.11:21538320 chr11:021538320 0 W/21538320-21538320 FN2734-S SNP A -> C AC=1;AN=200;BQB=0.784993;DP=4469;DP4=2277,1926,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.19347e-09;MQSB=0.998981;RPB=0.338293;SGB=1.46408;VDB=0.539469;EFF=INTRON(MODIFIER||||318|LOC_Os11g36500|protein_coding|CODING|LOC_Os11g36500.1|3|1) FN2663-S.SNP.11:21548515 chr11:021548515 0 W/21548515-21548515 FN2663-S SNP T -> A AC=1;AN=200;BQB=0.440163;DP=4946;DP4=2309,2429,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.61302e-12;MQSB=0.59558;RPB=0.550271;SGB=61.9006;VDB=0.332701;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.11:21549837 chr11:021549837 0 W/21549837-21549837 FN1481-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g36520 expressed protein SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1442-S.SNP.11:21552861 chr11:021552861 0 W/21552861-21552861 FN1442-S Single Base Substitution A-T INTRON HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2464.SNP.11:21554125 chr11:021554125 0 W/21554125-21554125 FN2464 SNP C -> A AC=1;AN=200;BQB=0.933974;DP=5236;DP4=2360,2558,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.17853e-14;MQSB=0.631501;RPB=0.846925;SGB=69.1109;VDB=0.236956;EFF=INTRON(MODIFIER||||290|LOC_Os11g36530|protein_coding|CODING|LOC_Os11g36530.1|3|1) FN3732-S.SNP.11:21555547 chr11:021555547 0 W/21555547-21555547 FN3732-S SNP T -> A AC=2;AN=190;BQB=0.909647;DP=2462;DP4=1048,1239,13,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.4043e-20;MQSB=0.842831;RPB=0.938028;SGB=67.0756;VDB=0.0900875;EFF=INTRON(MODIFIER||||290|LOC_Os11g36530|protein_coding|CODING|LOC_Os11g36530.1|2|1) FN3732-S.SNP.11:21555556 chr11:021555556 0 W/21555556-21555556 FN3732-S SNP G -> A AC=2;AN=190;BQB=0.913415;DP=2518;DP4=1077,1322,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.2457e-18;MQSB=0.912161;RPB=0.878861;SGB=121.957;VDB=0.0534966;EFF=INTRON(MODIFIER||||290|LOC_Os11g36530|protein_coding|CODING|LOC_Os11g36530.1|2|1) FN4041-S.SNP.11:21558189 chr11:021558189 0 W/21558189-21558189 FN4041-S SNP A -> G AC=1;AN=168;BQB=0.972794;DP=2914;DP4=1276,1475,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.50789e-08;MQSB=0.888756;RPB=0.769855;SGB=41.6096;VDB=0.877621;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.11:21561929 chr11:021561929 0 W/21561929-21561929 FN863-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN950-S.SNP.11:21563045 chr11:021563045 0 W/21563045-21563045 FN950-S Single Base Substitution T-C INTRON HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-304.SNP.11:21563474 chr11:021563474 0 W/21563474-21563474 FN-304 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN923-S.SNP.11:21572308 chr11:021572308 0 W/21572308-21572308 FN923-S Single Base Substitution G-A INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN2106-S.SNP.11:21581486 chr11:021581486 0 W/21581486-21581486 FN2106-S SNP A -> G AC=1;AN=168;BQB=0.0912286;DP=3407;DP4=172,3172,2,39;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0111535;MQB=6.20635e-06;MQSB=0.00440193;RPB=0.967913;SGB=-141.738;VDB=0.834736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3794-S.SNP.11:21585216 chr11:021585216 0 W/21585216-21585216 FN3794-S SNP C -> T AC=2;AN=190;BQB=0.999538;DP=2927;DP4=1495,1305,19,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.20965e-16;MQSB=0.999436;RPB=0.994866;SGB=25.8654;VDB=0.1738;EFF=INTERGENIC(MODIFIER||||||||||1) FN-400.SNP.11:21587799 chr11:021587799 0 W/21587799-21587799 FN-400 Single Base Substitution A-T INTERGENIC HET SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN400-S.SNP.11:21587799 chr11:021587799 0 W/21587799-21587799 FN400-S Single Base Substitution A-T INTERGENIC HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN851-S.SNP.11:21605394 chr11:021605394 0 W/21605394-21605394 FN851-S Single Base Substitution A-G INTERGENIC HET SNo: 757, Mutant_ID: FN851-S, Generation: M2, Mutations: 70, Genes: 47, Seed availability: Yes. FN2551-S.SNP.11:21606999 chr11:021606999 0 W/21606999-21606999 FN2551-S SNP A -> G AC=1;AN=188;BQB=0.906815;DP=4038;DP4=1858,1924,15,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.64648e-11;MQSB=0.792273;RPB=0.974343;SGB=76.1002;VDB=0.763751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2670-S.SNP.11:21616516 chr11:021616516 0 W/21616516-21616516 FN2670-S SNP C -> T AC=1;AN=200;BQB=0.997887;DP=5084;DP4=2346,2456,19,27;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000196696;MQB=5.32586e-25;MQSB=0.572268;RPB=0.995099;SGB=155.635;VDB=0.999465;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S294|727|LOC_Os11g36630|protein_coding|CODING|LOC_Os11g36630.1|5|1) FN581-S.SNP.11:21619496 chr11:021619496 0 W/21619496-21619496 FN581-S Single Base Substitution C-T INTRON HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2196-S.SNP.11:21620269 chr11:021620269 0 W/21620269-21620269 FN2196-S SNP C -> A AC=1;AN=190;BQB=0.996345;DP=4676;DP4=2294,2087,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00171086;MQB=2.53388e-11;MQSB=0.524969;RPB=0.58736;SGB=41.5369;VDB=0.325471;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggT|G1345|1714|LOC_Os11g36640|protein_coding|CODING|LOC_Os11g36640.1|6|1) FN2196-S.SNP.11:21620270 chr11:021620270 0 W/21620270-21620270 FN2196-S SNP C -> T AC=1;AN=190;BQB=0.66961;DP=4687;DP4=2288,2087,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00128014;MQB=6.46042e-09;MQSB=0.427024;RPB=0.997903;SGB=44.0907;VDB=0.386961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G1345E|1714|LOC_Os11g36640|protein_coding|CODING|LOC_Os11g36640.1|6|1) FN2487.SNP.11:21621986 chr11:021621986 0 W/21621986-21621986 FN2487 SNP G -> A AC=1;AN=200;BQB=0.0168625;DP=4894;DP4=2321,2077,8,12;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0143032;MQB=0.00325317;MQSB=0.0423285;RPB=0.445892;SGB=37.3004;VDB=0.668993;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S891|1714|LOC_Os11g36640|protein_coding|CODING|LOC_Os11g36640.1|3|1) FN2593-S.SNP.11:21631117 chr11:021631117 0 W/21631117-21631117 FN2593-S SNP C -> T AC=1;AN=188;BQB=0.0271337;DP=3395;DP4=1701,1446,16,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.29113e-16;MQSB=0.999985;RPB=0.696578;SGB=104.861;VDB=0.00359704;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.11:21631862 chr11:021631862 0 W/21631862-21631862 FN2423 SNP A -> C AC=1;AN=200;BQB=0.80696;DP=4356;DP4=2362,1615,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36148e-05;MQSB=0.900152;RPB=0.736214;SGB=16.4591;VDB=0.717018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.11:21637471 chr11:021637471 0 W/21637471-21637471 FN-175 Single Base Substitution C-G INTERGENIC HOMO SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN2377.SNP.11:21640306 chr11:021640306 0 W/21640306-21640306 FN2377 SNP C -> T AC=1;AN=192;BQB=0.99206;DP=5247;DP4=2497,2402,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.37313e-15;MQSB=0.974815;RPB=0.955053;SGB=54.5574;VDB=0.835238;EFF=INTERGENIC(MODIFIER||||||||||1) FN765-S.SNP.11:21640306 chr11:021640306 0 W/21640306-21640306 FN765-S Single Base Substitution C-T INTERGENIC HET SNo: 687, Mutant_ID: FN765-S, Generation: M2, Mutations: 66, Genes: 64, Seed availability: Yes. FN_552-1-1.SNP.11:21647929 chr11:021647929 0 W/21647929-21647929 FN_552-1-1 Single Base Substitution C-A Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN2095-S.SNP.11:21652194 chr11:021652194 0 W/21652194-21652194 FN2095-S SNP C -> T AC=2;AN=168;BQB=0.293585;DP=1807;DP4=763,941,18,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.90449e-20;MQSB=0.845792;RPB=0.704621;SGB=114.513;VDB=0.491303;EFF=INTERGENIC(MODIFIER||||||||||1) FN2629-S.SNP.11:21659229 chr11:021659229 0 W/21659229-21659229 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.362357;DP=3058;DP4=1320,1451,15,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32454e-14;MQSB=0.894292;RPB=0.904438;SGB=83.5316;VDB=0.888133;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.11:21661551 chr11:021661551 0 W/21661551-21661551 FN2719-S SNP A -> G AC=1;AN=200;BQB=0.734908;DP=4682;DP4=2302,2168,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.34429e-16;MQSB=0.756147;RPB=0.534893;SGB=55.5366;VDB=0.777199;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.11:21668664 chr11:021668664 0 W/21668664-21668664 FN-248 Single Base Substitution T-A INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2359.SNP.11:21671648 chr11:021671648 0 W/21671648-21671648 FN2359 SNP C -> T AC=1;AN=192;BQB=0.495756;DP=4071;DP4=1820,1954,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.84761e-11;MQSB=0.99506;RPB=0.983895;SGB=57.6018;VDB=0.615287;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.11:21671760 chr11:021671760 0 W/21671760-21671760 FN4188-S SNP C -> T AC=1;AN=170;BQB=0.91867;DP=2288;DP4=1033,1178,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.31322e-08;MQSB=0.320223;RPB=0.965976;SGB=56.7575;VDB=0.488253;EFF=INTERGENIC(MODIFIER||||||||||1) W23-2-1.SNP.11:21673535 chr11:021673535 0 W/21673535-21673535 W23-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1398, Mutant_ID: W23-2-1, Generation: M2, Mutations: 52, Genes: 8, Seed availability: Yes. FN1750-S.SNP.11:21678684 chr11:021678684 0 W/21678684-21678684 FN1750-S SNP A -> T AC=2;AN=188;BQB=0.849938;DP=2185;DP4=560,1554,8,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.15744e-16;MQSB=0.999406;RPB=0.91724;SGB=96.2203;VDB=0.35655;EFF=INTRON(MODIFIER||||868|LOC_Os11g36719|protein_coding|CODING|LOC_Os11g36719.1|1|1) FN4305-S.SNP.11:21679671 chr11:021679671 0 W/21679671-21679671 FN4305-S SNP G -> C AC=1;AN=170;BQB=0.908428;DP=2520;DP4=1279,1162,4,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.53191e-10;MQSB=0.820044;RPB=0.463293;SGB=61.2001;VDB=0.46574;EFF=INTRON(MODIFIER||||868|LOC_Os11g36719|protein_coding|CODING|LOC_Os11g36719.1|1|1) FN-277.SNP.11:21682420 chr11:021682420 0 W/21682420-21682420 FN-277 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g36719 lipoxygenase, putative, expressed SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-353.SNP.11:21691160 chr11:021691160 0 W/21691160-21691160 FN-353 Single Base Substitution T-G UTR_3_PRIME HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN1427-S.SNP.11:21693739 chr11:021693739 0 W/21693739-21693739 FN1427-S Single Base Substitution G-A INTERGENIC HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1509-S.SNP.11:21695794 chr11:021695794 0 W/21695794-21695794 FN1509-S Single Base Substitution G-T INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN2663-S.SNP.11:21700850 chr11:021700850 0 W/21700850-21700850 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.748785;DP=4690;DP4=2132,2253,4,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.49932e-10;MQSB=0.96878;RPB=0.220621;SGB=43.8747;VDB=0.860367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.11:21700854 chr11:021700854 0 W/21700854-21700854 FN2663-S SNP G -> T AC=1;AN=200;BQB=0.877221;DP=4722;DP4=2123,2377,4,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.31546e-08;MQSB=0.95036;RPB=0.118331;SGB=7.88476;VDB=0.666532;EFF=INTERGENIC(MODIFIER||||||||||1) FN929-S.SNP.11:21702546 chr11:021702546 0 W/21702546-21702546 FN929-S Single Base Substitution A-T INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN929-S.SNP.11:21702547 chr11:021702547 0 W/21702547-21702547 FN929-S Single Base Substitution A-T INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN_798-4-2.SNP.11:21702935 chr11:021702935 0 W/21702935-21702935 FN_798-4-2 Single Base Substitution A-T Homo SNo: 1486, Mutant_ID: FN_798-4-2, Generation: M3, Mutations: 53, Genes: 12, Seed availability: No. FN448-S.SNP.11:21712681 chr11:021712681 0 W/21712681-21712681 FN448-S Single Base Substitution T-C INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1667-S.SNP.11:21713821 chr11:021713821 0 W/21713821-21713821 FN1667-S SNP C -> G AC=1;AN=188;BQB=0.992783;DP=2269;DP4=1067,1173,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.43805e-05;MQSB=0.903598;RPB=0.617829;SGB=21.8113;VDB=0.742057;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.11:21717696 chr11:021717696 0 W/21717696-21717696 FN2333 SNP A -> T AC=1;AN=192;BQB=0.340059;DP=3990;DP4=2579,1224,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000250627;MQB=1.74884e-09;MQSB=0.380214;RPB=0.703116;SGB=10.4835;VDB=0.751815;EFF=INTRON(MODIFIER||||71|LOC_Os11g36780|protein_coding|CODING|LOC_Os11g36780.1|1|1) FN865-S.SNP.11:21718428 chr11:021718428 0 W/21718428-21718428 FN865-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g36780 hypothetical protein SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2711-S.SNP.11:21724288 chr11:021724288 0 W/21724288-21724288 FN2711-S SNP A -> T AC=1;AN=200;BQB=0.992403;DP=5604;DP4=2916,2423,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.25099e-11;MQSB=0.998138;RPB=0.436502;SGB=9.48993;VDB=0.911961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.11:21729247 chr11:021729247 0 W/21729247-21729247 FN3626-S SNP G -> T AC=1;AN=190;BQB=0.755277;DP=2551;DP4=1352,1115,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80398e-09;MQSB=0.985243;RPB=0.891335;SGB=58.2031;VDB=0.189882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.11:21732777 chr11:021732777 0 W/21732777-21732777 FN1521-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN979-S.SNP.11:21739541 chr11:021739541 0 W/21739541-21739541 FN979-S Single Base Substitution T-A INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN_822-5-1.SNP.11:21744921 chr11:021744921 0 W/21744921-21744921 FN_822-5-1 Single Base Substitution C-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1357-S.SNP.11:21752135 chr11:021752135 0 W/21752135-21752135 FN1357-S Single Base Substitution T-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1367-S.SNP.11:21757895 chr11:021757895 0 W/21757895-21757895 FN1367-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os11g36880 retrotransposon protein, putative, unclassified, expressed SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1283-S.SNP.11:21765069 chr11:021765069 0 W/21765069-21765069 FN1283-S Single Base Substitution G-A INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4312-S.SNP.11:21765588 chr11:021765588 0 W/21765588-21765588 FN4312-S SNP A -> G AC=1;AN=170;BQB=0.813625;DP=1915;DP4=903,826,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.5007e-06;MQSB=0.983885;RPB=0.830146;SGB=-17.4322;VDB=0.994529;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L48|93|LOC_Os11g36900|protein_coding|CODING|LOC_Os11g36900.1|1|1) FN3821-S.SNP.11:21768112 chr11:021768112 0 W/21768112-21768112 FN3821-S SNP T -> A AC=1;AN=190;BQB=0.999998;DP=2728;DP4=1369,1252,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000366569;MQB=0.000105581;MQSB=0.648608;RPB=0.901403;SGB=28.9929;VDB=0.466016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.11:21779356 chr11:021779356 0 W/21779356-21779356 FN2191-S SNP A -> T AC=2;AN=190;BQB=0.318669;DP=5087;DP4=2524,2226,23,17;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0318459;MQB=3.19894e-18;MQSB=0;RPB=0.197095;SGB=42.958;VDB=0.540019;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.11:21779357 chr11:021779357 0 W/21779357-21779357 FN2191-S SNP A -> T AC=2;AN=190;BQB=0.985098;DP=5104;DP4=2540,2184,23,16;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0333072;MQB=1.37659e-17;MQSB=0;RPB=0.343562;SGB=128.501;VDB=0.663687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2191-S.SNP.11:21779358 chr11:021779358 0 W/21779358-21779358 FN2191-S SNP A -> T AC=2;AN=190;BQB=0.781762;DP=5121;DP4=2517,2216,18,18;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0353447;MQB=9.32266e-17;MQSB=0;RPB=0.815479;SGB=117.84;VDB=0.609769;EFF=INTERGENIC(MODIFIER||||||||||1) W464-2-1.SNP.11:21793418 chr11:021793418 0 W/21793418-21793418 W464-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN-173.SNP.11:21794592 chr11:021794592 0 W/21794592-21794592 FN-173 Single Base Substitution C-A INTERGENIC HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN2660-S.SNP.11:21798356 chr11:021798356 0 W/21798356-21798356 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.912418;DP=4497;DP4=2174,2133,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.77677e-07;MQSB=0.956309;RPB=0.987001;SGB=29.4541;VDB=0.558524;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M111I|141|LOC_Os11g36950|protein_coding|CODING|LOC_Os11g36950.1|5|1) FN1261-S.SNP.11:21799767 chr11:021799767 0 W/21799767-21799767 FN1261-S Single Base Substitution G-A INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2708-S.SNP.11:21800632 chr11:021800632 0 W/21800632-21800632 FN2708-S SNP C -> T AC=1;AN=200;BQB=0.780262;DP=4696;DP4=2145,2189,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.61759e-13;MQSB=0.903809;RPB=0.954;SGB=72.7161;VDB=0.00331282;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.11:21803214 chr11:021803214 0 W/21803214-21803214 FN801-S Single Base Substitution T-A INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN801-S.SNP.11:21803215 chr11:021803215 0 W/21803215-21803215 FN801-S Single Base Substitution C-A INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN859-S.SNP.11:21812560 chr11:021812560 0 W/21812560-21812560 FN859-S Single Base Substitution A-G INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1508-S.SNP.11:21814101 chr11:021814101 0 W/21814101-21814101 FN1508-S Single Base Substitution G-A INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN3374-S.SNP.11:21839667 chr11:021839667 0 W/21839667-21839667 FN3374-S SNP A -> T AC=1;AN=184;BQB=0.653581;DP=3382;DP4=1550,1701,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000295683;MQB=5.62198e-11;MQSB=0.937999;RPB=0.522845;SGB=17.4548;VDB=0.0128666;EFF=INTRON(MODIFIER||||624|LOC_Os11g37000|protein_coding|CODING|LOC_Os11g37000.1|1|1) FN2417.SNP.11:21846086 chr11:021846086 0 W/21846086-21846086 FN2417 SNP A -> G AC=1;AN=200;BQB=0.457014;DP=3204;DP4=1132,1732,2,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.00127901;MQSB=7.2527e-10;RPB=0.80424;SGB=18.639;VDB=0.876455;EFF=INTERGENIC(MODIFIER||||||||||1) FN-37.SNP.11:21857700 chr11:021857700 0 W/21857700-21857700 FN-37 Single Base Substitution G-A INTERGENIC Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN869-S.SNP.11:21862828 chr11:021862828 0 W/21862828-21862828 FN869-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g37040 expressed protein SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN-59.SNP.11:21889197 chr11:021889197 0 W/21889197-21889197 FN-59 Single Base Substitution G-A INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1290-S.SNP.11:21889244 chr11:021889244 0 W/21889244-21889244 FN1290-S Single Base Substitution C-A INTERGENIC HET SNo: 1103, Mutant_ID: FN1290-S, Generation: M2, Mutations: 55, Genes: 14, Seed availability: Yes. FN3652-S.SNP.11:21889829 chr11:021889829 0 W/21889829-21889829 FN3652-S SNP C -> T AC=2;AN=190;BQB=0.356475;DP=2367;DP4=1022,1274,8,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.08978e-06;MQSB=0.959845;RPB=0.448243;SGB=67.3108;VDB=0.425442;EFF=INTERGENIC(MODIFIER||||||||||1) FN3443-S.SNP.11:21890032 chr11:021890032 0 W/21890032-21890032 FN3443-S SNP T -> C AC=1;AN=184;BQB=0.890243;DP=2628;DP4=917,1588,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.35854e-11;MQSB=0.581571;RPB=0.997417;SGB=53.3568;VDB=0.779209;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.11:21901759 chr11:021901759 0 W/21901759-21901759 FN2092-S SNP C -> T AC=1;AN=168;BQB=0.982848;DP=4047;DP4=1880,2132,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.92348e-06;MQSB=0.835001;RPB=0.328878;SGB=14.8923;VDB=0.606741;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.11:21906619 chr11:021906619 0 W/21906619-21906619 FN-188 Single Base Substitution C-T INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1482-S.SNP.11:21911792 chr11:021911792 0 W/21911792-21911792 FN1482-S Single Base Substitution C-T INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN2403.SNP.11:21924108 chr11:021924108 0 W/21924108-21924108 FN2403 SNP T -> C AC=2;AN=200;BQB=0.404773;DP=4598;DP4=2351,2009,23,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.96607e-20;MQSB=0.556887;RPB=0.240908;SGB=150.973;VDB=0.430536;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.11:21925533 chr11:021925533 0 W/21925533-21925533 FN3386-S SNP A -> G AC=2;AN=184;BQB=0.505351;DP=3131;DP4=748,1842,10,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.2057e-14;MQSB=0.500088;RPB=0.234681;SGB=-69.5724;VDB=0.00876006;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.11:21932573 chr11:021932573 0 W/21932573-21932573 FN923-S Single Base Substitution A-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN3310-S.SNP.11:21935866 chr11:021935866 0 W/21935866-21935866 FN3310-S SNP G -> A AC=1;AN=184;BQB=0.616851;DP=3078;DP4=1422,1570,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.66536e-09;MQSB=0.998685;RPB=0.376237;SGB=8.32411;VDB=0.270256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3845-S.SNP.11:21945849 chr11:021945849 0 W/21945849-21945849 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.999824;DP=3005;DP4=1370,1505,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.73223e-07;MQSB=0.93805;RPB=0.990363;SGB=49.0954;VDB=0.336113;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R340*|1665|LOC_Os11g37170|protein_coding|CODING|LOC_Os11g37170.1|2|1);LOF=(LOC_Os11g37170|LOC_Os11g37170|1|1.00);NMD=(LOC_Os11g37170|LOC_Os11g37170|1|1.00) FN471-S.SNP.11:21947811 chr11:021947811 0 W/21947811-21947811 FN471-S Single Base Substitution C-T INTRON HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN_822-5-1.SNP.11:21961900 chr11:021961900 0 W/21961900-21961900 FN_822-5-1 Single Base Substitution A-G HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN3795-S.SNP.11:21970907 chr11:021970907 0 W/21970907-21970907 FN3795-S SNP T -> A AC=1;AN=190;BQB=0.942955;DP=2696;DP4=1214,1330,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.0103729;MQSB=1.94958e-05;RPB=0.999123;SGB=26.3271;VDB=0.51669;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.11:21974675 chr11:021974675 0 W/21974675-21974675 FN421-S Single Base Substitution G-A INTERGENIC HOMO SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN2388.SNP.11:21979644 chr11:021979644 0 W/21979644-21979644 FN2388 SNP T -> A AC=1;AN=200;BQB=0.150001;DP=4221;DP4=2257,1647,23,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.78098e-26;MQSB=0.901027;RPB=0.286902;SGB=144.819;VDB=0.108585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.11:21979645 chr11:021979645 0 W/21979645-21979645 FN2388 SNP C -> A AC=1;AN=200;BQB=0.135688;DP=4220;DP4=2260,1700,22,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36771e-26;MQSB=0.854086;RPB=0.271707;SGB=187.814;VDB=0.10878;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.11:21979885 chr11:021979885 0 W/21979885-21979885 FN962-S Single Base Substitution G-A INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3675-S.SNP.11:21985351 chr11:021985351 0 W/21985351-21985351 FN3675-S SNP T -> A AC=1;AN=190;BQB=0.35076;DP=2424;DP4=1308,895,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.68936e-05;MQSB=0.887831;RPB=0.830039;SGB=-14.3297;VDB=0.294356;EFF=INTRON(MODIFIER||||258|LOC_Os11g37200|protein_coding|CODING|LOC_Os11g37200.1|2|1) FN828-S.SNP.11:21994690 chr11:021994690 0 W/21994690-21994690 FN828-S Single Base Substitution T-C INTERGENIC HOMO SNo: 741, Mutant_ID: FN828-S, Generation: M2, Mutations: 52, Genes: 6, Seed availability: Yes. FN2252-S.SNP.11:21996804 chr11:021996804 0 W/21996804-21996804 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.909865;DP=5211;DP4=2458,2317,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000767607;MQB=2.39055e-10;MQSB=0.41948;RPB=0.999931;SGB=10.3266;VDB=0.711079;EFF=INTERGENIC(MODIFIER||||||||||1) FN1257-S.SNP.11:22001371 chr11:022001371 0 W/22001371-22001371 FN1257-S Single Base Substitution A-G INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1257-S.SNP.11:22001372 chr11:022001372 0 W/22001372-22001372 FN1257-S Single Base Substitution G-A INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1082-S.SNP.11:22003919 chr11:022003919 0 W/22003919-22003919 FN1082-S Single Base Substitution C-T INTRON HOMO SNo: 966, Mutant_ID: FN1082-S, Generation: M2, Mutations: 60, Genes: 17, Seed availability: Yes. FN224-S.SNP.11:22004540 chr11:022004540 0 W/22004540-22004540 FN224-S Single Base Substitution C-T INTRON HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1299-S.SNP.11:22005361 chr11:022005361 0 W/22005361-22005361 FN1299-S Single Base Substitution A-G INTRON HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN4230-S.SNP.11:22006677 chr11:022006677 0 W/22006677-22006677 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.561638;DP=2566;DP4=1265,1217,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.63112e-08;MQSB=0.982804;RPB=0.812992;SGB=65.6427;VDB=0.435229;EFF=INTRON(MODIFIER||||823|LOC_Os11g37260|protein_coding|CODING|LOC_Os11g37260.1|12|1) FN772-S.SNP.11:22017867 chr11:022017867 0 W/22017867-22017867 FN772-S Single Base Substitution G-A INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3524-S.SNP.11:22018756 chr11:022018756 0 W/22018756-22018756 FN3524-S SNP A -> G AC=1;AN=188;BQB=0.628079;DP=2026;DP4=512,1427,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.06202e-05;MQSB=0.863037;RPB=0.76215;SGB=-2.17824;VDB=0.566422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.11:22019121 chr11:022019121 0 W/22019121-22019121 FN2465 SNP G -> A AC=2;AN=200;BQB=0.788923;DP=2243;DP4=396,1704,9,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.99849e-15;MQSB=0.0727895;RPB=0.983074;SGB=127.947;VDB=0.192637;EFF=INTERGENIC(MODIFIER||||||||||1) FN-409.SNP.11:22019466 chr11:022019466 0 W/22019466-22019466 FN-409 Single Base Substitution G-A STOP_GAINED HOMO LOC_Os11g37290 hypothetical protein SNo: 404, Mutant_ID: FN-409, Generation: M2, Mutations: 72, Genes: 21, Seed availability: Yes. FN3365-S.SNP.11:22020779 chr11:022020779 0 W/22020779-22020779 FN3365-S SNP A -> C AC=2;AN=184;BQB=0.785428;DP=2711;DP4=1276,1266,21,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.19504e-21;MQSB=0.733024;RPB=0.989173;SGB=83.798;VDB=0.477219;EFF=INTRON(MODIFIER||||134|LOC_Os11g37290|protein_coding|CODING|LOC_Os11g37290.1|1|1) FN3365-S.SNP.11:22020782 chr11:022020782 0 W/22020782-22020782 FN3365-S SNP A -> T AC=2;AN=184;BQB=0.394439;DP=2699;DP4=1272,1328,16,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.25114e-20;MQSB=0.821391;RPB=0.908562;SGB=106.184;VDB=0.433766;EFF=INTRON(MODIFIER||||134|LOC_Os11g37290|protein_coding|CODING|LOC_Os11g37290.1|1|1) FN3514-S.SNP.11:22021445 chr11:022021445 0 W/22021445-22021445 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.677869;DP=3792;DP4=2057,1623,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00105485;MQB=2.35243e-05;MQSB=2.95747e-13;RPB=0.401029;SGB=43.0708;VDB=0.0985666;EFF=INTRON(MODIFIER||||134|LOC_Os11g37290|protein_coding|CODING|LOC_Os11g37290.1|1|1) FN-246.SNP.11:22034211 chr11:022034211 0 W/22034211-22034211 FN-246 Single Base Substitution C-T INTERGENIC HOMO SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN429-S.SNP.11:22038668 chr11:022038668 0 W/22038668-22038668 FN429-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g37320 LTPL79 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN661-S.SNP.11:22058255 chr11:022058255 0 W/22058255-22058255 FN661-S Single Base Substitution A-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2723-S.SNP.11:22081896 chr11:022081896 0 W/22081896-22081896 FN2723-S SNP C -> A AC=1;AN=200;BQB=0.479395;DP=4576;DP4=2249,2109,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.34294e-08;MQSB=0.999713;RPB=0.808174;SGB=33.0593;VDB=0.00414998;EFF=INTERGENIC(MODIFIER||||||||||1) FN1622-S.SNP.11:22084163 chr11:022084163 0 W/22084163-22084163 FN1622-S Single Base Substitution G-C INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2383.SNP.11:22086456 chr11:022086456 0 W/22086456-22086456 FN2383 SNP C -> G AC=1;AN=192;BQB=0.860742;DP=4307;DP4=2498,1546,10,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.0037e-07;MQSB=0.49234;RPB=0.999207;SGB=4.22611;VDB=0.900183;EFF=INTRON(MODIFIER||||139|LOC_Os11g37400|protein_coding|CODING|LOC_Os11g37400.1|2|1) FN3979-S.SNP.11:22087499 chr11:022087499 0 W/22087499-22087499 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.732322;DP=2206;DP4=1026,1004,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.63645e-05;MQSB=0.598545;RPB=0.584944;SGB=47.7421;VDB=0.868582;EFF=INTRON(MODIFIER||||139|LOC_Os11g37400|protein_coding|CODING|LOC_Os11g37400.1|2|1) FN373-S.SNP.11:22096944 chr11:022096944 0 W/22096944-22096944 FN373-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g37420 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3424-S.SNP.11:22118564 chr11:022118564 0 W/22118564-22118564 FN3424-S SNP C -> T AC=1;AN=184;BQB=0.366744;DP=2625;DP4=1380,1101,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0198095;MQB=0.234508;MQSB=0.000188141;RPB=0.64809;SGB=15.9331;VDB=0.848338;EFF=INTRON(MODIFIER||||363|LOC_Os11g37460|protein_coding|CODING|LOC_Os11g37460.1|1|1) FN2753-S.SNP.11:22125403 chr11:022125403 0 W/22125403-22125403 FN2753-S SNP G -> T AC=1;AN=200;BQB=0.657704;DP=4451;DP4=1965,2276,12,11;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00516738;MQB=2.75608e-08;MQSB=0.0109948;RPB=0.805194;SGB=72.7161;VDB=0.9859;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.11:22129012 chr11:022129012 0 W/22129012-22129012 FN801-S Single Base Substitution G-T INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN1283-S.SNP.11:22136979 chr11:022136979 0 W/22136979-22136979 FN1283-S Single Base Substitution C-T INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN_N1-151-7.SNP.11:22143392 chr11:022143392 0 W/22143392-22143392 FN_N1-151-7 Single Base Substitution T-G HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN1116-S.SNP.11:22164668 chr11:022164668 0 W/22164668-22164668 FN1116-S Single Base Substitution A-G INTRON HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN2195-S.SNP.11:22180743 chr11:022180743 0 W/22180743-22180743 FN2195-S SNP T -> C AC=2;AN=190;BQB=0.17551;DP=2867;DP4=1991,578,23,1;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000697593;MQB=4.51843e-08;MQSB=8.60791e-05;RPB=0.264087;SGB=75.1932;VDB=0.644153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1050-S.SNP.11:22182750 chr11:022182750 0 W/22182750-22182750 FN1050-S Single Base Substitution A-G INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2795-S.SNP.11:22217528 chr11:022217528 0 W/22217528-22217528 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.909878;DP=3427;DP4=1685,1572,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0;MQB=0.142228;MQSB=0.573361;RPB=0.842587;SGB=43.7442;VDB=0.121896;EFF=INTRON(MODIFIER||||184|LOC_Os11g37640|protein_coding|CODING|LOC_Os11g37640.1|1|1) FN1737-S.SNP.11:22222037 chr11:022222037 0 W/22222037-22222037 FN1737-S SNP G -> T AC=1;AN=188;BQB=0.729315;DP=4024;DP4=2371,1592,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0;MQB=0.476077;MQSB=0.968691;RPB=0.994763;SGB=2.45162;VDB=0.891624;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.11:22228024 chr11:022228024 0 W/22228024-22228024 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.988675;DP=2502;DP4=1260,1180,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.1989e-05;MQSB=0.810672;RPB=0.988955;SGB=39.2697;VDB=0.874637;EFF=INTRON(MODIFIER||||677|LOC_Os11g37660|protein_coding|CODING|LOC_Os11g37660.1|1|1) FN1423-S.SNP.11:22230163 chr11:022230163 0 W/22230163-22230163 FN1423-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g37660 vegetative storage protein, putative, expressed SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1065-S.SNP.11:22240200 chr11:022240200 0 W/22240200-22240200 FN1065-S Single Base Substitution T-C INTERGENIC HOMO SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3476-S.SNP.11:22242884 chr11:022242884 0 W/22242884-22242884 FN3476-S SNP C -> A AC=1;AN=184;BQB=0.691362;DP=3946;DP4=1910,1944,15,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06021e-11;MQSB=0.912504;RPB=0.90106;SGB=103.004;VDB=0.213369;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A380|794|LOC_Os11g37670|protein_coding|CODING|LOC_Os11g37670.1|2|1) FN587-S.SNP.11:22246155 chr11:022246155 0 W/22246155-22246155 FN587-S Single Base Substitution C-T INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN-90.SNP.11:22257335 chr11:022257335 0 W/22257335-22257335 FN-90 Single Base Substitution G-T INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN3842-S.SNP.11:22257543 chr11:022257543 0 W/22257543-22257543 FN3842-S SNP A -> T AC=1;AN=190;BQB=0.758068;DP=3015;DP4=1587,1323,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.91827e-10;MQSB=0.994943;RPB=0.7802;SGB=64.5316;VDB=0.373458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2263-S.SNP.11:22261000 chr11:022261000 0 W/22261000-22261000 FN2263-S SNP C -> T AC=1;AN=190;BQB=0.996325;DP=4850;DP4=2256,2329,11,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.95878e-12;MQSB=0.885911;RPB=0.725868;SGB=49.1985;VDB=0.12836;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.11:22263715 chr11:022263715 0 W/22263715-22263715 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.725088;DP=4853;DP4=2325,2153,6,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.24261e-06;MQSB=0.755631;RPB=0.907815;SGB=35.8441;VDB=0.320998;EFF=INTRON(MODIFIER||||217|LOC_Os11g37680|protein_coding|CODING|LOC_Os11g37680.1|3|1) FN-37.SNP.11:22265055 chr11:022265055 0 W/22265055-22265055 FN-37 Single Base Substitution G-T INTRON Homo SNo: 37, Mutant_ID: FN-37, Generation: M2, Mutations: 22, Genes: 20, Seed availability: Yes. FN-100.SNP.11:22267045 chr11:022267045 0 W/22267045-22267045 FN-100 Single Base Substitution T-G INTERGENIC HET SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN1120-S.SNP.11:22270287 chr11:022270287 0 W/22270287-22270287 FN1120-S Single Base Substitution G-T INTRON HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2292.SNP.11:22270287 chr11:022270287 0 W/22270287-22270287 FN2292 SNP G -> T AC=1;AN=192;BQB=0.979579;DP=4497;DP4=2362,1925,18,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00022237;MQB=4.50352e-14;MQSB=0.781303;RPB=0.874332;SGB=99.4183;VDB=0.164131;EFF=INTRON(MODIFIER||||447|LOC_Os11g37690|protein_coding|CODING|LOC_Os11g37690.1|2|1) FN3058-S.SNP.11:22270287 chr11:022270287 0 W/22270287-22270287 FN3058-S SNP G -> T AC=2;AN=184;BQB=0.894953;DP=3027;DP4=1665,1252,21,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.8149e-19;MQSB=0.974167;RPB=0.263397;SGB=152.744;VDB=0.179917;EFF=INTRON(MODIFIER||||447|LOC_Os11g37690|protein_coding|CODING|LOC_Os11g37690.1|2|1) FN4150-S.SNP.11:22270287 chr11:022270287 0 W/22270287-22270287 FN4150-S SNP G -> T AC=2;AN=170;BQB=0.992685;DP=2479;DP4=1323,1067,19,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.07109e-22;MQSB=0.96824;RPB=0.899793;SGB=154.496;VDB=0.454225;EFF=INTRON(MODIFIER||||447|LOC_Os11g37690|protein_coding|CODING|LOC_Os11g37690.1|2|1) FN-188.SNP.11:22280093 chr11:022280093 0 W/22280093-22280093 FN-188 Single Base Substitution C-A INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN950-S.SNP.11:22290016 chr11:022290016 0 W/22290016-22290016 FN950-S Single Base Substitution G-A INTRON HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN1497-S.SNP.11:22291403 chr11:022291403 0 W/22291403-22291403 FN1497-S Single Base Substitution G-T INTRON Homo SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3471-S.SNP.11:22300700 chr11:022300700 0 W/22300700-22300700 FN3471-S SNP G -> A AC=2;AN=184;BQB=0.774027;DP=3425;DP4=1539,1757,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.53947e-15;MQSB=0.926952;RPB=0.690451;SGB=148.222;VDB=0.213196;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.11:22309303 chr11:022309303 0 W/22309303-22309303 FN701-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g37730 glutathione S-transferase, N-terminal domain containing protein, expressed SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1025-S.SNP.11:22313586 chr11:022313586 0 W/22313586-22313586 FN1025-S Single Base Substitution A-T INTRON HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3401-S.SNP.11:22323452 chr11:022323452 0 W/22323452-22323452 FN3401-S SNP C -> T AC=1;AN=184;BQB=0.994348;DP=3114;DP4=1279,1734,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=3.8012e-06;MQSB=0.0541624;RPB=0.435648;SGB=32.2261;VDB=0.213703;EFF=INTRON(MODIFIER||||347|LOC_Os11g37750|protein_coding|CODING|LOC_Os11g37750.1|2|1) FN1673-S.SNP.11:22325834 chr11:022325834 0 W/22325834-22325834 FN1673-S SNP A -> T AC=1;AN=188;BQB=0.00417427;DP=4071;DP4=1664,2378,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.28732e-08;MQSB=0.710219;RPB=0.755869;SGB=-36.4511;VDB=0.805324;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.11:22325913 chr11:022325913 0 W/22325913-22325913 FN439-S Single Base Substitution C-T INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN-283.SNP.11:22326368 chr11:022326368 0 W/22326368-22326368 FN-283 Single Base Substitution G-A INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN1358-S.SNP.11:22328515 chr11:022328515 0 W/22328515-22328515 FN1358-S Single Base Substitution G-A INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1255-S.SNP.11:22344923 chr11:022344923 0 W/22344923-22344923 FN1255-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3970-S.SNP.11:22345029 chr11:022345029 0 W/22345029-22345029 FN3970-S SNP T -> A AC=1;AN=168;BQB=0.891272;DP=2666;DP4=1364,1190,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.82338e-11;MQSB=0.887598;RPB=0.935239;SGB=83.1885;VDB=0.132009;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.11:22348376 chr11:022348376 0 W/22348376-22348376 FN-232 Single Base Substitution C-T INTERGENIC HOMO SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3384-S.SNP.11:22348935 chr11:022348935 0 W/22348935-22348935 FN3384-S SNP C -> A AC=1;AN=184;BQB=0.991989;DP=3287;DP4=1825,1360,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.11186e-06;MQSB=0.552093;RPB=0.430323;SGB=28.7043;VDB=0.239887;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.11:22359590 chr11:022359590 0 W/22359590-22359590 FN3440-S SNP G -> A AC=1;AN=184;BQB=0.89125;DP=3173;DP4=1629,1437,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.7067e-06;MQSB=0.870606;RPB=0.93288;SGB=57.786;VDB=0.291443;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.11:22360108 chr11:022360108 0 W/22360108-22360108 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.986086;DP=3758;DP4=1656,1803,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0149015;MQB=0.977151;MQSB=0.000916102;RPB=0.671911;SGB=28.7675;VDB=0.272621;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.11:22361013 chr11:022361013 0 W/22361013-22361013 FN-305 Single Base Substitution G-C INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3968-S.SNP.11:22361013 chr11:022361013 0 W/22361013-22361013 FN3968-S SNP G -> C AC=1;AN=168;BQB=0.934214;DP=2631;DP4=700,1801,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0159635;MQB=0.798995;MQSB=0.128076;RPB=0.588661;SGB=43.3113;VDB=0.150242;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.11:22361247 chr11:022361247 0 W/22361247-22361247 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN2285.SNP.11:22365902 chr11:022365902 0 W/22365902-22365902 FN2285 SNP T -> C AC=1;AN=192;BQB=0.350758;DP=4761;DP4=2280,1952,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00021004;MQB=1.13369e-08;MQSB=0.956856;RPB=0.934673;SGB=-13.64;VDB=0.807779;EFF=INTERGENIC(MODIFIER||||||||||1) FN446-S.SNP.11:22367966 chr11:022367966 0 W/22367966-22367966 FN446-S Single Base Substitution A-T INTRON HOMO SNo: 445, Mutant_ID: FN446-S, Generation: M2, Mutations: 50, Genes: 11, Seed availability: Yes. FN1596-S.SNP.11:22369472 chr11:022369472 0 W/22369472-22369472 FN1596-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g37780 stripe rust resistance protein Yr10, putative, expressed SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN2104-S.SNP.11:22376903 chr11:022376903 0 W/22376903-22376903 FN2104-S SNP A -> G AC=1;AN=168;BQB=0.31787;DP=3239;DP4=1468,1679,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.55681e-05;MQSB=0.588526;RPB=0.768863;SGB=2.75988;VDB=0.505717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.11:22376992 chr11:022376992 0 W/22376992-22376992 FN2470 SNP C -> G AC=1;AN=200;BQB=0.624553;DP=5076;DP4=2337,2525,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.86322e-10;MQSB=0.971768;RPB=0.697786;SGB=54.6902;VDB=0.355525;EFF=INTERGENIC(MODIFIER||||||||||1) FN3310-S.SNP.11:22380124 chr11:022380124 0 W/22380124-22380124 FN3310-S SNP A -> G AC=1;AN=184;BQB=0.966359;DP=2693;DP4=1380,1257,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.19836e-06;MQSB=0.977413;RPB=0.0338461;SGB=44.2207;VDB=0.150242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.11:22382262 chr11:022382262 0 W/22382262-22382262 FN3325-S SNP A -> G AC=1;AN=184;BQB=0.727797;DP=2919;DP4=1465,1379,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.14715e-06;MQSB=0.936018;RPB=0.424981;SGB=18.2315;VDB=0.212059;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.11:22388781 chr11:022388781 0 W/22388781-22388781 FN2201-S SNP T -> A AC=1;AN=190;BQB=0.937039;DP=4057;DP4=1885,1861,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000246488;MQB=7.18511e-15;MQSB=0.330907;RPB=0.977081;SGB=85.8548;VDB=0.0418176;EFF=INTRON(MODIFIER||||298|LOC_Os11g37800|protein_coding|CODING|LOC_Os11g37800.1|2|1) FN3394-S.SNP.11:22399896 chr11:022399896 0 W/22399896-22399896 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.897381;DP=4173;DP4=2356,1705,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.202013;MQB=0.0922553;MQSB=1.29291e-23;RPB=0.974889;SGB=62.3078;VDB=0.855535;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T988M|1966|LOC_Os11g37820|protein_coding|CODING|LOC_Os11g37820.1|2|1) W598-2-1.SNP.11:22406685 chr11:022406685 0 W/22406685-22406685 W598-2-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g37830 retrotransposon protein, putative, unclassified, expressed SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN4204-S.SNP.11:22416590 chr11:022416590 0 W/22416590-22416590 FN4204-S SNP T -> C AC=1;AN=170;BQB=0.795684;DP=1945;DP4=794,950,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.31044e-06;MQSB=0.871831;RPB=0.742921;SGB=-17.8749;VDB=0.217648;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.11:22426672 chr11:022426672 0 W/22426672-22426672 FN1358-S Single Base Substitution A-C INTERGENIC HET SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1061-S.SNP.11:22427572 chr11:022427572 0 W/22427572-22427572 FN1061-S Single Base Substitution G-A INTERGENIC HET SNo: 950, Mutant_ID: FN1061-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN4173-S.SNP.11:22428570 chr11:022428570 0 W/22428570-22428570 FN4173-S SNP T -> C AC=1;AN=170;BQB=0.953698;DP=2344;DP4=1170,1094,12,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.612e-10;MQSB=0.774802;RPB=0.946281;SGB=65.6427;VDB=0.600127;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N52|854|LOC_Os11g37860|protein_coding|CODING|LOC_Os11g37860.1|2|1) FN2750-S.SNP.11:22432143 chr11:022432143 0 W/22432143-22432143 FN2750-S SNP T -> G AC=2;AN=200;BQB=0.274734;DP=4790;DP4=2378,2211,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.4122e-15;MQSB=0.986747;RPB=0.972451;SGB=65.9573;VDB=0.864019;EFF=INTRON(MODIFIER||||854|LOC_Os11g37860|protein_coding|CODING|LOC_Os11g37860.1|2|1) FN3301-S.SNP.11:22433176 chr11:022433176 0 W/22433176-22433176 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.992735;DP=2669;DP4=1373,1175,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.63658e-07;MQSB=0.970036;RPB=0.949948;SGB=25.1826;VDB=0.960168;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G547E|854|LOC_Os11g37860|protein_coding|CODING|LOC_Os11g37860.1|3|1) FN3798-S.SNP.11:22437233 chr11:022437233 0 W/22437233-22437233 FN3798-S SNP C -> T AC=1;AN=190;BQB=0.620841;DP=3105;DP4=1467,1482,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.15073e-08;MQSB=0.979776;RPB=0.841311;SGB=43.2083;VDB=0.953199;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.11:22441078 chr11:022441078 0 W/22441078-22441078 FN916-S Single Base Substitution T-A INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-261.SNP.11:22441166 chr11:022441166 0 W/22441166-22441166 FN-261 Single Base Substitution G-A INTERGENIC HOMO SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN967-S.SNP.11:22447522 chr11:022447522 0 W/22447522-22447522 FN967-S Single Base Substitution G-A INTERGENIC HOMO SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN462-S.SNP.11:22451893 chr11:022451893 0 W/22451893-22451893 FN462-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os11g37880 stripe rust resistance protein Yr10, putative, expressed SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN2311.SNP.11:22459802 chr11:022459802 0 W/22459802-22459802 FN2311 SNP T -> G AC=1;AN=192;BQB=0.861003;DP=4977;DP4=2680,1947,11,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.55879e-13;MQSB=0.994203;RPB=0.671415;SGB=51.9931;VDB=0.522663;EFF=UTR_3_PRIME(MODIFIER||473||371|LOC_Os11g37890|protein_coding|CODING|LOC_Os11g37890.1|7|1),UTR_3_PRIME(MODIFIER||2211||169|LOC_Os11g37890|protein_coding|CODING|LOC_Os11g37890.3|6|1) W607-2-1.SNP.11:22468411 chr11:022468411 0 W/22468411-22468411 W607-2-1 Single Base Substitution C-T UTR_3_PRIME HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN407-S.SNP.11:22469482 chr11:022469482 0 W/22469482-22469482 FN407-S Single Base Substitution A-T INTRON HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1217-S.SNP.11:22477490 chr11:022477490 0 W/22477490-22477490 FN1217-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN539-S.SNP.11:22477939 chr11:022477939 0 W/22477939-22477939 FN539-S Single Base Substitution A-T INTERGENIC HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN539-S.SNP.11:22477940 chr11:022477940 0 W/22477940-22477940 FN539-S Single Base Substitution G-T INTERGENIC HOMO SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN549-S.SNP.11:22480012 chr11:022480012 0 W/22480012-22480012 FN549-S Single Base Substitution T-C INTERGENIC HET SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN2327.SNP.11:22480543 chr11:022480543 0 W/22480543-22480543 FN2327 SNP T -> C AC=1;AN=192;BQB=0.936967;DP=5107;DP4=2222,2567,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.32178e-09;MQSB=0.971986;RPB=0.968679;SGB=39.78;VDB=0.761314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.11:22481005 chr11:022481005 0 W/22481005-22481005 FN2681-S SNP T -> C AC=2;AN=200;BQB=0.998497;DP=3983;DP4=1792,1974,19,31;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0;MQB=1.56748e-08;MQSB=7.4907e-28;RPB=0.977891;SGB=60.8554;VDB=0.00869273;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.11:22501555 chr11:022501555 0 W/22501555-22501555 FN3296-S SNP A -> T AC=2;AN=184;BQB=0.711001;DP=2058;DP4=853,1127,5,5;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0;MQB=0.0290024;MQSB=0.887039;RPB=0.998914;SGB=25.1826;VDB=0.0934367;EFF=INTERGENIC(MODIFIER||||||||||1) FN2797-S.SNP.11:22508400 chr11:022508400 0 W/22508400-22508400 FN2797-S SNP G -> T AC=1;AN=198;BQB=0.807139;DP=4366;DP4=2142,1927,13,16;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0;MQB=1.13823e-10;MQSB=0.547484;RPB=0.0394773;SGB=-107.465;VDB=0.0561194;EFF=INTERGENIC(MODIFIER||||||||||1) FN1219-S.SNP.11:22525136 chr11:022525136 0 W/22525136-22525136 FN1219-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g37990 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN3481-S.SNP.11:22530669 chr11:022530669 0 W/22530669-22530669 FN3481-S SNP A -> G AC=2;AN=184;BQB=0.992954;DP=2278;DP4=1063,1150,8,9;HOB=0.0215028;ICB=0.494625;MQ=40;MQ0F=0;MQB=0.0391366;MQSB=0.00546241;RPB=0.93592;SGB=71.3514;VDB=0.181976;EFF=INTERGENIC(MODIFIER||||||||||1) FN-39.SNP.11:22538288 chr11:022538288 0 W/22538288-22538288 FN-39 Single Base Substitution C-T UTR_3_PRIME Homo SNo: 39, Mutant_ID: FN-39, Generation: M2, Mutations: 17, Genes: 75, Seed availability: No. FN1338-S.SNP.11:22547792 chr11:022547792 0 W/22547792-22547792 FN1338-S Single Base Substitution A-G INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3896-S.SNP.11:22604611 chr11:022604611 0 W/22604611-22604611 FN3896-S SNP C -> T AC=1;AN=158;BQB=0.99095;DP=2320;DP4=1176,1063,2,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000191502;MQSB=0.999998;RPB=0.999177;SGB=25.2211;VDB=0.827357;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.11:22605031 chr11:022605031 0 W/22605031-22605031 FN975-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN769-S.SNP.11:22608758 chr11:022608758 0 W/22608758-22608758 FN769-S Single Base Substitution A-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN3761-S.SNP.11:22624258 chr11:022624258 0 W/22624258-22624258 FN3761-S SNP C -> T AC=1;AN=190;BQB=0.990587;DP=2728;DP4=1157,1462,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56988e-05;MQSB=0.998696;RPB=0.0455693;SGB=25.439;VDB=0.392568;EFF=UTR_5_PRIME(MODIFIER||158||525|LOC_Os11g38150|protein_coding|CODING|LOC_Os11g38150.1|1|1) FN1135-S.SNP.11:22630088 chr11:022630088 0 W/22630088-22630088 FN1135-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN977-S.SNP.11:22633142 chr11:022633142 0 W/22633142-22633142 FN977-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g38170 notchless protein, putative, expressed SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN2325.SNP.11:22660063 chr11:022660063 0 W/22660063-22660063 FN2325 SNP C -> A AC=1;AN=192;BQB=0.0330634;DP=3903;DP4=1666,1867,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.22339e-05;MQSB=0.00012146;RPB=0.908984;SGB=75.4235;VDB=0.243279;EFF=UTR_5_PRIME(MODIFIER||13||408|LOC_Os11g38250|protein_coding|CODING|LOC_Os11g38250.1|1|1) FN507-S.SNP.11:22687044 chr11:022687044 0 W/22687044-22687044 FN507-S Single Base Substitution A-C INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN2163-S.SNP.11:22687540 chr11:022687540 0 W/22687540-22687540 FN2163-S SNP C -> T AC=1;AN=166;BQB=1.53527e-06;DP=9204;DP4=5020,4080,32,23;HOB=7.25795e-05;ICB=0.000146033;MQ=49;MQ0F=0;MQB=6.10254e-12;MQSB=0.671258;RPB=0.754661;SGB=-712.53;VDB=0.397254;EFF=INTERGENIC(MODIFIER||||||||||1) FN3330-S.SNP.11:22687540 chr11:022687540 0 W/22687540-22687540 FN3330-S SNP C -> T AC=1;AN=184;BQB=0.434348;DP=7188;DP4=3368,3571,13,16;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.71029e-12;MQSB=0.0934337;RPB=0.854247;SGB=25.0638;VDB=0.844149;EFF=INTERGENIC(MODIFIER||||||||||1) FN1421-S.SNP.11:22701136 chr11:022701136 0 W/22701136-22701136 FN1421-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g38330 ZOS11-06 - C2H2 zinc finger protein, expressed SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN2089-S.SNP.11:22719738 chr11:022719738 0 W/22719738-22719738 FN2089-S SNP G -> A AC=1;AN=166;BQB=0.614746;DP=3539;DP4=2235,1277,11,7;HOB=7.25795e-05;ICB=0.000146033;MQ=37;MQ0F=0;MQB=0.106314;MQSB=0.981258;RPB=0.884887;SGB=29.4772;VDB=0.999886;EFF=INTERGENIC(MODIFIER||||||||||1) FN354-S.SNP.11:22722070 chr11:022722070 0 W/22722070-22722070 FN354-S Single Base Substitution G-T INTERGENIC HET SNo: 344, Mutant_ID: FN354-S, Generation: M2, Mutations: 59, Genes: 22, Seed availability: Yes. FN4165-S.SNP.11:22727731 chr11:022727731 0 W/22727731-22727731 FN4165-S SNP C -> G AC=1;AN=170;BQB=0.951194;DP=2833;DP4=1353,1421,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=41;MQ0F=0.0172962;MQB=0.00621184;MQSB=3.97016e-10;RPB=0.463339;SGB=43.4296;VDB=0.464423;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gCt|G46A|84|LOC_Os11g38370|protein_coding|CODING|LOC_Os11g38370.1|1|1) FN3424-S.SNP.11:22729374 chr11:022729374 0 W/22729374-22729374 FN3424-S SNP G -> A AC=2;AN=184;BQB=0.895395;DP=1510;DP4=1326,110,11,0;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.50743e-07;MQSB=0.0933405;RPB=0.273056;SGB=44.2207;VDB=0.564844;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L58|372|LOC_Os11g38380|protein_coding|CODING|LOC_Os11g38380.1|1|1) FN3871-S.SNP.11:22749654 chr11:022749654 0 W/22749654-22749654 FN3871-S SNP C -> T AC=2;AN=158;BQB=0.66171;DP=2208;DP4=871,1205,11,15;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0;MQB=3.06519e-08;MQSB=0.324332;RPB=0.733771;SGB=77.8763;VDB=0.880501;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.11:22767562 chr11:022767562 0 W/22767562-22767562 FN911-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g38440 expressed protein SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN874-S.SNP.11:22797420 chr11:022797420 0 W/22797420-22797420 FN874-S Single Base Substitution C-A INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN_788-1-1.SNP.11:22799388 chr11:022799388 0 W/22799388-22799388 FN_788-1-1 Single Base Substitution G-A HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN1340-S.SNP.11:22805918 chr11:022805918 0 W/22805918-22805918 FN1340-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN1009-S.SNP.11:22806061 chr11:022806061 0 W/22806061-22806061 FN1009-S Single Base Substitution T-C INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN3775-S.SNP.11:22813611 chr11:022813611 0 W/22813611-22813611 FN3775-S SNP T -> C AC=2;AN=190;BQB=0.996271;DP=2707;DP4=1147,1433,11,15;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.00923532;MQB=0.989203;MQSB=2.22345e-09;RPB=0.090727;SGB=82.301;VDB=0.235024;EFF=INTERGENIC(MODIFIER||||||||||1) W313-1-1-1-1.SNP.11:22820395 chr11:022820395 0 W/22820395-22820395 W313-1-1-1-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g38510 expressed protein SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2429.SNP.11:22828672 chr11:022828672 0 W/22828672-22828672 FN2429 SNP C -> T AC=1;AN=200;BQB=0.962291;DP=4181;DP4=2060,1869,9,15;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.0961492;MQB=0.235384;MQSB=0;RPB=0.938681;SGB=104.921;VDB=0.0780632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L113F|882|LOC_Os11g38530|protein_coding|CODING|LOC_Os11g38530.1|1|1) FN1606-S.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN1606-S Single Base Substitution C-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN2313.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN2313 SNP C -> T AC=2;AN=192;BQB=0.132629;DP=4973;DP4=2472,2159,24,19;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.00100543;MQB=8.05588e-11;MQSB=0.64103;RPB=0.752582;SGB=190.705;VDB=0.0218067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN2696-S SNP C -> T AC=2;AN=200;BQB=0.988353;DP=4582;DP4=2316,2003,21,10;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.000218245;MQB=8.43171e-09;MQSB=0.85904;RPB=0.992341;SGB=65.9573;VDB=0.168398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN3967-S SNP C -> T AC=1;AN=182;BQB=0.914022;DP=2625;DP4=1365,1200,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.000761905;MQB=0.00343265;MQSB=0.888677;RPB=0.225412;SGB=39.6007;VDB=0.324775;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN433-S Single Base Substitution C-T INTERGENIC HOMO SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN488-S.SNP.11:22839130 chr11:022839130 0 W/22839130-22839130 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN2314.SNP.11:22856928 chr11:022856928 0 W/22856928-22856928 FN2314 SNP A -> G AC=1;AN=192;BQB=0.916947;DP=4619;DP4=2308,1911,8,7;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.000865988;MQB=0.0173617;MQSB=0.000610348;RPB=0.871514;SGB=23.7852;VDB=0.112958;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.11:22879613 chr11:022879613 0 W/22879613-22879613 FN692-S Single Base Substitution G-A INTRON HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN1624-S.SNP.11:22880010 chr11:022880010 0 W/22880010-22880010 FN1624-S Single Base Substitution T-A INTRON HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN2578-S.SNP.11:22890451 chr11:022890451 0 W/22890451-22890451 FN2578-S SNP A -> T AC=2;AN=198;BQB=0.858199;DP=3712;DP4=1697,1835,6,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.95003e-12;MQSB=0.840237;RPB=0.888917;SGB=90.9049;VDB=0.193224;EFF=INTRON(MODIFIER||||700|LOC_Os11g38620|protein_coding|CODING|LOC_Os11g38620.2|4|1),INTRON(MODIFIER||||723|LOC_Os11g38620|protein_coding|CODING|LOC_Os11g38620.1|5|1) FN1040-S.SNP.11:22896133 chr11:022896133 0 W/22896133-22896133 FN1040-S Single Base Substitution A-G INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1263-S.SNP.11:22896987 chr11:022896987 0 W/22896987-22896987 FN1263-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN963-S.SNP.11:22899249 chr11:022899249 0 W/22899249-22899249 FN963-S Single Base Substitution T-A INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN1493-S.SNP.11:22901329 chr11:022901329 0 W/22901329-22901329 FN1493-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os11g38630 expressed protein SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN920-S.SNP.11:22918438 chr11:022918438 0 W/22918438-22918438 FN920-S Single Base Substitution C-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN2399.SNP.11:22920699 chr11:022920699 0 W/22920699-22920699 FN2399 SNP A -> T AC=2;AN=200;BQB=0.922953;DP=4268;DP4=2202,1805,9,16;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0;MQB=0.0055012;MQSB=0.0529191;RPB=0.999008;SGB=109.527;VDB=0.272871;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.11:22933895 chr11:022933895 0 W/22933895-22933895 FN755-S Single Base Substitution C-T INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2364.SNP.11:22939947 chr11:022939947 0 W/22939947-22939947 FN2364 SNP A -> T AC=2;AN=192;BQB=0.753869;DP=4169;DP4=1513,2384,17,18;HOB=0.0206163;ICB=0.494846;MQ=33;MQ0F=0;MQB=0.361104;MQSB=0.229361;RPB=0.093134;SGB=75.0722;VDB=0.0317687;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.11:22942002 chr11:022942002 0 W/22942002-22942002 FN2123-S SNP G -> A AC=2;AN=168;BQB=0.630769;DP=3239;DP4=1148,2024,18,29;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.0475455;MQB=0.35972;MQSB=0.00482813;RPB=0.257148;SGB=-157.153;VDB=0.388763;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R506*|645|LOC_Os11g38660|protein_coding|CODING|LOC_Os11g38660.1|5|1) FN1635-S.SNP.11:22947680 chr11:022947680 0 W/22947680-22947680 FN1635-S SNP T -> A AC=1;AN=188;BQB=0.884021;DP=3078;DP4=1138,1904,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=0.000366484;MQSB=6.01771e-05;RPB=0.779225;SGB=-14.9998;VDB=0.505421;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.11:22950737 chr11:022950737 0 W/22950737-22950737 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.938185;DP=4634;DP4=2267,2134,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07182e-13;MQSB=0.991564;RPB=0.552787;SGB=65.5058;VDB=0.684669;EFF=INTRON(MODIFIER||||623|LOC_Os11g38670|protein_coding|CODING|LOC_Os11g38670.1|2|1) FN3578-S.SNP.11:22955406 chr11:022955406 0 W/22955406-22955406 FN3578-S SNP T -> C AC=2;AN=188;BQB=0.946469;DP=1943;DP4=629,1198,5,22;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=5.14981e-07;MQSB=0.0275175;RPB=0.759557;SGB=117.128;VDB=0.873995;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.11:22961382 chr11:022961382 0 W/22961382-22961382 FN1703-S SNP C -> A AC=1;AN=188;BQB=0.855563;DP=2908;DP4=1219,1657,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=9.24961e-06;MQSB=0.00445893;RPB=0.821399;SGB=7.0815;VDB=0.688126;EFF=INTERGENIC(MODIFIER||||||||||1) FN2495.SNP.11:22985111 chr11:022985111 0 W/22985111-22985111 FN2495 SNP G -> A AC=1;AN=200;BQB=0.0405715;DP=4790;DP4=2093,2436,9,10;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.02881;MQB=0.00216285;MQSB=1.9061e-11;RPB=0.511342;SGB=-12.5051;VDB=0.506087;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.11:22998711 chr11:022998711 0 W/22998711-22998711 FN2146-S SNP C -> T AC=1;AN=168;BQB=0.000133708;DP=4014;DP4=2073,1910,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.21385e-06;MQSB=0.989243;RPB=0.909527;SGB=-82.6471;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.11:22999473 chr11:022999473 0 W/22999473-22999473 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN2440.SNP.11:23000730 chr11:023000730 0 W/23000730-23000730 FN2440 SNP A -> C AC=2;AN=198;BQB=0.909122;DP=3302;DP4=1341,1742,17,28;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.000605693;MQB=1.67369e-17;MQSB=0.99733;RPB=0.939329;SGB=201.63;VDB=0.99923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.11:23000969 chr11:023000969 0 W/23000969-23000969 FN1617-S Single Base Substitution T-A INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN1617-S.SNP.11:23000970 chr11:023000970 0 W/23000970-23000970 FN1617-S Single Base Substitution T-A INTERGENIC Homo SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2661-S.SNP.11:23002125 chr11:023002125 0 W/23002125-23002125 FN2661-S SNP T -> A AC=2;AN=200;BQB=0.947537;DP=3000;DP4=1450,1364,8,6;HOB=0.0198;ICB=0.495051;MQ=27;MQ0F=0;MQB=0.393727;MQSB=0.923348;RPB=0.405895;SGB=58.8698;VDB=0.819504;EFF=INTERGENIC(MODIFIER||||||||||1) FN4099-S.SNP.11:23011420 chr11:023011420 0 W/23011420-23011420 FN4099-S SNP T -> C AC=1;AN=182;BQB=0.965952;DP=3248;DP4=1529,1633,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=5.5486e-08;MQSB=0.96274;RPB=0.710808;SGB=48.6223;VDB=0.334886;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctA/ctG|L1218|1347|LOC_Os11g38750|protein_coding|CODING|LOC_Os11g38750.1|5|1) FN2713-S.SNP.11:23011542 chr11:023011542 0 W/23011542-23011542 FN2713-S SNP G -> A AC=1;AN=200;BQB=0.644238;DP=4442;DP4=2144,2050,22,14;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0;MQB=9.20624e-06;MQSB=0.221255;RPB=0.978548;SGB=78.9831;VDB=0.802692;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L1178F|1347|LOC_Os11g38750|protein_coding|CODING|LOC_Os11g38750.1|5|1) FN2477.SNP.11:23017890 chr11:023017890 0 W/23017890-23017890 FN2477 SNP T -> G AC=1;AN=200;BQB=0.685829;DP=4097;DP4=2266,1453,11,9;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.0003595;MQSB=0.00668536;RPB=0.983455;SGB=37.3004;VDB=0.790723;EFF=INTERGENIC(MODIFIER||||||||||1) FN75-S-43.SNP.11:23021686 chr11:023021686 0 W/23021686-23021686 FN75-S-43 SNP T -> C AC=2;AN=190;BQB=0.00129282;DP=4664;DP4=1666,2547,21,40;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.78097e-17;MQSB=0.436131;RPB=0.907449;SGB=10.0409;VDB=0.339696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.11:23030338 chr11:023030338 0 W/23030338-23030338 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.998643;DP=5784;DP4=3134,2353,18,10;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0629322;MQB=0.91631;MQSB=3.23487e-16;RPB=0.792551;SGB=58.1418;VDB=0.29164;EFF=INTERGENIC(MODIFIER||||||||||1) FN3440-S.SNP.11:23030924 chr11:023030924 0 W/23030924-23030924 FN3440-S SNP C -> T AC=1;AN=184;BQB=0.411235;DP=5345;DP4=2520,2595,11,20;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00336763;MQB=0.929908;MQSB=0.00600701;RPB=0.752239;SGB=-42.9253;VDB=0.958749;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.11:23033143 chr11:023033143 0 W/23033143-23033143 FN2365 SNP C -> T AC=1;AN=192;BQB=0.688782;DP=5074;DP4=2541,2259,13,15;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00630666;MQB=1.2718e-07;MQSB=0.957383;RPB=0.974652;SGB=57.1218;VDB=0.737572;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.11:23038297 chr11:023038297 0 W/23038297-23038297 FN1572-S Single Base Substitution C-T INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3356-S.SNP.11:23041982 chr11:023041982 0 W/23041982-23041982 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.640556;DP=2989;DP4=1481,1403,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00229559;MQSB=0.99911;RPB=0.233436;SGB=30.6558;VDB=0.131006;EFF=INTERGENIC(MODIFIER||||||||||1) FN1045-S.SNP.11:23043896 chr11:023043896 0 W/23043896-23043896 FN1045-S Single Base Substitution A-T INTERGENIC HET SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1304-S.SNP.11:23049723 chr11:023049723 0 W/23049723-23049723 FN1304-S Single Base Substitution A-G INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN845-S.SNP.11:23052143 chr11:023052143 0 W/23052143-23052143 FN845-S Single Base Substitution T-A INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN2296.SNP.11:23057615 chr11:023057615 0 W/23057615-23057615 FN2296 SNP G -> C AC=1;AN=192;BQB=0.890872;DP=5114;DP4=2158,2695,8,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.79354e-08;MQSB=0.461915;RPB=0.789476;SGB=-35.7635;VDB=0.963964;EFF=INTERGENIC(MODIFIER||||||||||1) FN4124-S.SNP.11:23070988 chr11:023070988 0 W/23070988-23070988 FN4124-S SNP G -> A AC=1;AN=182;BQB=0.774338;DP=2257;DP4=788,1401,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.22083e-05;MQSB=0.539449;RPB=0.970983;SGB=28.6061;VDB=0.376838;EFF=INTRON(MODIFIER||||278|LOC_Os11g38800|protein_coding|CODING|LOC_Os11g38800.1|7|1),INTRON(MODIFIER||||278|LOC_Os11g38800|protein_coding|CODING|LOC_Os11g38800.2|7|1) FN3506-S.SNP.11:23073562 chr11:023073562 0 W/23073562-23073562 FN3506-S SNP C -> A AC=1;AN=188;BQB=0.903053;DP=2834;DP4=1389,1258,11,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.29859e-07;MQSB=0.974939;RPB=0.987337;SGB=35.9843;VDB=0.602503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3511-S.SNP.11:23075533 chr11:023075533 0 W/23075533-23075533 FN3511-S SNP T -> A AC=1;AN=188;BQB=0.99959;DP=2822;DP4=1320,1409,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.66892e-07;MQSB=1;RPB=0.386015;SGB=28.8977;VDB=0.0677962;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.11:23075748 chr11:023075748 0 W/23075748-23075748 FN2574-S SNP T -> A AC=1;AN=198;BQB=0.963583;DP=3906;DP4=1934,1789,6,2;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00146378;MQSB=0.976506;RPB=0.073152;SGB=18.5788;VDB=0.331588;EFF=INTERGENIC(MODIFIER||||||||||1) FN4119-S.SNP.11:23081026 chr11:023081026 0 W/23081026-23081026 FN4119-S SNP T -> C AC=1;AN=182;BQB=0.949937;DP=2874;DP4=1693,1114,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.31464e-05;MQSB=0.994599;RPB=0.993963;SGB=21.5845;VDB=0.02641;EFF=INTRON(MODIFIER||||460|LOC_Os11g38810|protein_coding|CODING|LOC_Os11g38810.1|3|1),INTRON(MODIFIER||||282|LOC_Os11g38810|protein_coding|CODING|LOC_Os11g38810.2|3|1) FN-127.SNP.11:23082538 chr11:023082538 0 W/23082538-23082538 FN-127 Single Base Substitution A-T INTERGENIC HOMO SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN1690-S.SNP.11:23083481 chr11:023083481 0 W/23083481-23083481 FN1690-S SNP A -> T AC=1;AN=188;BQB=0.995941;DP=3142;DP4=1232,1884,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42281e-07;MQSB=0.883582;RPB=0.788783;SGB=3.99491;VDB=0.112958;EFF=INTERGENIC(MODIFIER||||||||||1) FN-295.SNP.11:23083681 chr11:023083681 0 W/23083681-23083681 FN-295 Single Base Substitution G-C INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN-295.SNP.11:23083682 chr11:023083682 0 W/23083682-23083682 FN-295 Single Base Substitution A-T INTERGENIC HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN1509-S.SNP.11:23086598 chr11:023086598 0 W/23086598-23086598 FN1509-S Single Base Substitution A-G INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN949-S.SNP.11:23091084 chr11:023091084 0 W/23091084-23091084 FN949-S Single Base Substitution C-T STOP_GAINED HET LOC_Os11g38820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN949-S.SNP.11:23093506 chr11:023093506 0 W/23093506-23093506 FN949-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g38820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 855, Mutant_ID: FN949-S, Generation: M2, Mutations: 47, Genes: 91, Seed availability: Yes. FN407-S.SNP.11:23100874 chr11:023100874 0 W/23100874-23100874 FN407-S Single Base Substitution G-A INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2290.SNP.11:23100920 chr11:023100920 0 W/23100920-23100920 FN2290 SNP G -> C AC=1;AN=192;BQB=0.139501;DP=5058;DP4=2460,2354,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.66768e-08;MQSB=0.0370276;RPB=0.657667;SGB=-37.0704;VDB=0.331571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1679-S.SNP.11:23101178 chr11:023101178 0 W/23101178-23101178 FN1679-S SNP G -> A AC=2;AN=188;BQB=0.522581;DP=3841;DP4=1743,2031,25,30;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.5341e-27;MQSB=0.80454;RPB=0.870456;SGB=-53.3492;VDB=0.319647;EFF=INTERGENIC(MODIFIER||||||||||1) FN4106-S.SNP.11:23109704 chr11:023109704 0 W/23109704-23109704 FN4106-S SNP G -> A AC=1;AN=182;BQB=0.951672;DP=2884;DP4=1426,1383,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.11562e-10;MQSB=0.912799;RPB=0.978675;SGB=46.1603;VDB=0.741435;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.11:23110319 chr11:023110319 0 W/23110319-23110319 FN2203-S SNP G -> A AC=1;AN=190;BQB=0.649434;DP=3927;DP4=972,2498,6,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.63886e-09;MQSB=0.446093;RPB=0.668009;SGB=18.096;VDB=0.80114;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.11:23129221 chr11:023129221 0 W/23129221-23129221 FN239-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g38860 methyltransferase, putative, expressed SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN-32.SNP.11:23142635 chr11:023142635 0 W/23142635-23142635 FN-32 Single Base Substitution C-T INTERGENIC Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN3832-S.SNP.11:23154236 chr11:023154236 0 W/23154236-23154236 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.813728;DP=2853;DP4=1128,1524,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1184e-07;MQSB=0.935093;RPB=0.275699;SGB=23.6597;VDB=0.831512;EFF=INTRON(MODIFIER||||1469|LOC_Os11g38890|protein_coding|CODING|LOC_Os11g38890.1|6|1) FN1355-S.SNP.11:23163939 chr11:023163939 0 W/23163939-23163939 FN1355-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1355-S.SNP.11:23163943 chr11:023163943 0 W/23163943-23163943 FN1355-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3432-S.SNP.11:23164197 chr11:023164197 0 W/23164197-23164197 FN3432-S SNP T -> A AC=1;AN=184;BQB=0.951658;DP=2550;DP4=1221,1232,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.23395e-05;MQSB=0.985686;RPB=0.536646;SGB=25.1826;VDB=0.635404;EFF=UTR_3_PRIME(MODIFIER||1224||813|LOC_Os11g38900|protein_coding|CODING|LOC_Os11g38900.1|4|1) FN4140-S.SNP.11:23184080 chr11:023184080 0 W/23184080-23184080 FN4140-S SNP G -> C AC=1;AN=170;BQB=0.695952;DP=2381;DP4=965,1353,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.24993e-07;MQSB=0.990591;RPB=0.518157;SGB=43.4296;VDB=0.262875;EFF=INTERGENIC(MODIFIER||||||||||1) FN3761-S.SNP.11:23196980 chr11:023196980 0 W/23196980-23196980 FN3761-S SNP A -> G AC=1;AN=190;BQB=0.8885;DP=3194;DP4=1533,1472,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6459e-08;MQSB=0.419584;RPB=0.999783;SGB=46.7622;VDB=0.367878;EFF=INTRON(MODIFIER||||432|LOC_Os11g38980|protein_coding|CODING|LOC_Os11g38980.1|1|1),INTRON(MODIFIER||||432|LOC_Os11g38980|protein_coding|CODING|LOC_Os11g38980.2|1|1),INTRON(MODIFIER||||432|LOC_Os11g38980|protein_coding|CODING|LOC_Os11g38980.3|1|1),INTRON(MODIFIER||||432|LOC_Os11g38980|protein_coding|CODING|LOC_Os11g38980.4|1|1) FN-393.SNP.11:23201147 chr11:023201147 0 W/23201147-23201147 FN-393 Single Base Substitution C-T INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2708-S.SNP.11:23201344 chr11:023201344 0 W/23201344-23201344 FN2708-S SNP A -> T AC=2;AN=200;BQB=0.494884;DP=4836;DP4=2246,2356,26,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.21224e-24;MQSB=0.926252;RPB=0.679281;SGB=94.6142;VDB=0.94197;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.11:23201345 chr11:023201345 0 W/23201345-23201345 FN2708-S SNP A -> T AC=2;AN=200;BQB=0.767948;DP=4839;DP4=2241,2342,27,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.74538e-23;MQSB=0.917928;RPB=0.373345;SGB=49.6192;VDB=0.935111;EFF=INTERGENIC(MODIFIER||||||||||1) FN1037-S.SNP.11:23204832 chr11:023204832 0 W/23204832-23204832 FN1037-S Single Base Substitution C-T INTERGENIC HOMO SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN-51.SNP.11:23206768 chr11:023206768 0 W/23206768-23206768 FN-51 Single Base Substitution C-T INTERGENIC HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN4070-S.SNP.11:23207890 chr11:023207890 0 W/23207890-23207890 FN4070-S SNP C -> T AC=1;AN=182;BQB=0.848217;DP=2323;DP4=1191,1031,7,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.44547e-08;MQSB=0.782933;RPB=0.937383;SGB=80.1982;VDB=0.713817;EFF=INTERGENIC(MODIFIER||||||||||1) FN1440-S.SNP.11:23211714 chr11:023211714 0 W/23211714-23211714 FN1440-S Single Base Substitution G-A INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN1355-S.SNP.11:23219995 chr11:023219995 0 W/23219995-23219995 FN1355-S Single Base Substitution T-C INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3311-S.SNP.11:23223796 chr11:023223796 0 W/23223796-23223796 FN3311-S SNP T -> A AC=2;AN=184;BQB=0.566175;DP=3280;DP4=1571,1509,17,21;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.45266e-17;MQSB=0.251465;RPB=0.518663;SGB=166.309;VDB=0.791703;EFF=INTRON(MODIFIER||||101|LOC_Os11g39000|protein_coding|CODING|LOC_Os11g39000.1|1|1),INTRON(MODIFIER||||100|LOC_Os11g39000|protein_coding|CODING|LOC_Os11g39000.2|1|1) FN1669-S.SNP.11:23229216 chr11:023229216 0 W/23229216-23229216 FN1669-S SNP A -> C AC=1;AN=188;BQB=0.0044339;DP=3776;DP4=1821,1926,11,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00016126;MQSB=0.997669;RPB=0.281096;SGB=-83.9838;VDB=0.614673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.11:23237926 chr11:023237926 0 W/23237926-23237926 FN3710-S SNP T -> C AC=2;AN=190;BQB=0.773625;DP=2678;DP4=1254,1254,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.13685e-08;MQSB=0.990282;RPB=0.394011;SGB=64.5316;VDB=0.96734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.11:23250493 chr11:023250493 0 W/23250493-23250493 FN2210-S SNP G -> C AC=1;AN=190;BQB=0.90019;DP=3982;DP4=1924,1754,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.01307e-06;MQSB=0.225237;RPB=0.973562;SGB=44.5415;VDB=0.345322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gGg|A8G|189|LOC_Os11g39050|protein_coding|CODING|LOC_Os11g39050.1|1|1) FN2472.SNP.11:23251859 chr11:023251859 0 W/23251859-23251859 FN2472 SNP T -> A AC=2;AN=200;BQB=0.339838;DP=4005;DP4=2026,1648,27,21;HOB=0.0198;ICB=0.495051;MQ=37;MQ0F=0.00149813;MQB=1.92267e-07;MQSB=7.3891e-19;RPB=0.777337;SGB=110.245;VDB=0.740498;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.11:23256647 chr11:023256647 0 W/23256647-23256647 FN2195-S SNP G -> A AC=2;AN=190;BQB=0.0796981;DP=3677;DP4=1792,1562,9,7;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0;MQB=0.000576146;MQSB=0.724522;RPB=0.438725;SGB=67.3108;VDB=0.00652528;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.11:23256852 chr11:023256852 0 W/23256852-23256852 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.823765;DP=3408;DP4=1414,1880,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0;MQB=0.000956914;MQSB=0.887177;RPB=0.738656;SGB=71.3514;VDB=0.252995;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.11:23257563 chr11:023257563 0 W/23257563-23257563 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.779869;DP=3544;DP4=1820,1527,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0;MQB=0.000215386;MQSB=5.0662e-17;RPB=0.317758;SGB=57.786;VDB=0.291443;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.11:23263441 chr11:023263441 0 W/23263441-23263441 FN3823-S SNP G -> A AC=1;AN=190;BQB=0.878193;DP=3026;DP4=1504,1435,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.7916e-07;MQSB=0.811908;RPB=0.976832;SGB=39.9877;VDB=0.577201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E133K|185|LOC_Os11g39090|protein_coding|CODING|LOC_Os11g39090.1|1|1) FN1338-S.SNP.11:23275365 chr11:023275365 0 W/23275365-23275365 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3861-S.SNP.11:23278972 chr11:023278972 0 W/23278972-23278972 FN3861-S SNP G -> T AC=2;AN=158;BQB=0.296401;DP=2252;DP4=944,1226,8,12;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0.0026643;MQB=1.09771e-06;MQSB=0.160424;RPB=0.727796;SGB=57.6596;VDB=0.639752;EFF=INTERGENIC(MODIFIER||||||||||1) FN2115-S.SNP.11:23285902 chr11:023285902 0 W/23285902-23285902 FN2115-S SNP C -> T AC=1;AN=168;BQB=0.76218;DP=2203;DP4=1136,1009,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.1523e-06;MQSB=0.777442;RPB=0.937473;SGB=22.1847;VDB=0.845537;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.11:23287704 chr11:023287704 0 W/23287704-23287704 FN4030-S SNP A -> G AC=1;AN=168;BQB=0.810888;DP=2722;DP4=1320,1289,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.93229e-10;MQSB=0.978922;RPB=0.705175;SGB=29.4772;VDB=0.211352;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.11:23287750 chr11:023287750 0 W/23287750-23287750 FN924-S Single Base Substitution C-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN2713-S.SNP.11:23289024 chr11:023289024 0 W/23289024-23289024 FN2713-S SNP C -> A AC=1;AN=200;BQB=0.496286;DP=4661;DP4=1973,2404,15,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.15332e-20;MQSB=0.885706;RPB=0.961364;SGB=73.7728;VDB=0.494068;EFF=INTERGENIC(MODIFIER||||||||||1) FN2450.SNP.11:23289698 chr11:023289698 0 W/23289698-23289698 FN2450 SNP A -> T AC=1;AN=200;BQB=0.631256;DP=4616;DP4=2309,2119,5,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29222e-05;MQSB=0.999864;RPB=0.997044;SGB=31.2392;VDB=0.108414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.11:23302548 chr11:023302548 0 W/23302548-23302548 FN3697-S SNP T -> C AC=1;AN=190;BQB=0.784482;DP=2383;DP4=1037,1206,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.6138e-07;MQSB=0.95944;RPB=0.967691;SGB=23.6597;VDB=0.252585;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K100|456|LOC_Os11g39150|protein_coding|CODING|LOC_Os11g39150.1|4|1) FN3538-S.SNP.11:23306909 chr11:023306909 0 W/23306909-23306909 FN3538-S SNP A -> T AC=1;AN=188;BQB=0.690915;DP=2689;DP4=1270,1353,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.85338e-07;MQSB=0.994166;RPB=0.116485;SGB=28.8977;VDB=0.770514;EFF=INTRON(MODIFIER||||1186|LOC_Os11g39160|protein_coding|CODING|LOC_Os11g39160.1|4|1) FN1596-S.SNP.11:23321936 chr11:023321936 0 W/23321936-23321936 FN1596-S Single Base Substitution C-G INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN553-S.SNP.11:23324428 chr11:023324428 0 W/23324428-23324428 FN553-S Single Base Substitution C-T INTERGENIC HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN861-S.SNP.11:23324428 chr11:023324428 0 W/23324428-23324428 FN861-S Single Base Substitution C-T INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN2658-S.SNP.11:23325086 chr11:023325086 0 W/23325086-23325086 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.68511;DP=5074;DP4=2209,2607,5,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.13674e-09;MQSB=0.856491;RPB=0.510922;SGB=-35.3156;VDB=0.425599;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.11:23337473 chr11:023337473 0 W/23337473-23337473 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.992644;DP=2647;DP4=1306,1255,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.59131e-08;MQSB=0.884444;RPB=0.879864;SGB=31.4354;VDB=0.363551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.11:23337947 chr11:023337947 0 W/23337947-23337947 FN2774-S SNP C -> T AC=1;AN=188;BQB=0.971665;DP=4270;DP4=1946,1986,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.79632e-07;MQSB=0.755104;RPB=0.362763;SGB=1.37381;VDB=0.303227;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.11:23338386 chr11:023338386 0 W/23338386-23338386 FN1210-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN1372-S.SNP.11:23340342 chr11:023340342 0 W/23340342-23340342 FN1372-S Single Base Substitution C-T INTERGENIC HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN1464-S.SNP.11:23341904 chr11:023341904 0 W/23341904-23341904 FN1464-S Single Base Substitution G-A INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN3764-S.SNP.11:23342892 chr11:023342892 0 W/23342892-23342892 FN3764-S SNP A -> T AC=1;AN=190;BQB=0.796788;DP=3372;DP4=1793,1462,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82926e-06;MQSB=0.995798;RPB=0.815796;SGB=53.6492;VDB=0.58245;EFF=INTRON(MODIFIER||||245|LOC_Os11g39200|protein_coding|CODING|LOC_Os11g39200.1|2|1) FN532-S.SNP.11:23350806 chr11:023350806 0 W/23350806-23350806 FN532-S Single Base Substitution C-T INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN758-S.SNP.11:23352353 chr11:023352353 0 W/23352353-23352353 FN758-S Single Base Substitution C-T INTERGENIC HET SNo: 680, Mutant_ID: FN758-S, Generation: M2, Mutations: 44, Genes: 103, Seed availability: Yes. FN2348.SNP.11:23360109 chr11:023360109 0 W/23360109-23360109 FN2348 SNP T -> A AC=2;AN=192;BQB=0.97693;DP=4577;DP4=1625,2610,13,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.35668e-23;MQSB=0.999712;RPB=0.064353;SGB=199.834;VDB=0.0410972;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.11:23360134 chr11:023360134 0 W/23360134-23360134 FN772-S Single Base Substitution T-A INTERGENIC HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1216-S.SNP.11:23364977 chr11:023364977 0 W/23364977-23364977 FN1216-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g39230 retrotransposon protein, putative, unclassified, expressed SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN2751-S.SNP.11:23368383 chr11:023368383 0 W/23368383-23368383 FN2751-S SNP T -> C AC=2;AN=200;BQB=0.96493;DP=4867;DP4=2701,1899,22,8;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.06096e-07;MQSB=0.00421629;RPB=0.90169;SGB=28.752;VDB=0.347452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.11:23375925 chr11:023375925 0 W/23375925-23375925 FN1040-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN1040-S.SNP.11:23375926 chr11:023375926 0 W/23375926-23375926 FN1040-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2551-S.SNP.11:23378985 chr11:023378985 0 W/23378985-23378985 FN2551-S SNP G -> A AC=1;AN=190;BQB=0.85234;DP=4048;DP4=2063,1753,15,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59177e-14;MQSB=0.936158;RPB=0.555598;SGB=86.8856;VDB=0.210586;EFF=INTERGENIC(MODIFIER||||||||||1) FN4190-S.SNP.11:23385509 chr11:023385509 0 W/23385509-23385509 FN4190-S SNP T -> G AC=2;AN=170;BQB=0.567474;DP=2881;DP4=1348,1445,13,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.44762e-13;MQSB=0.999315;RPB=0.806497;SGB=118.955;VDB=0.61259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgg/Ggg|W677G|815|LOC_Os11g39270|protein_coding|CODING|LOC_Os11g39270.1|7|1) FN886-S.SNP.11:23387748 chr11:023387748 0 W/23387748-23387748 FN886-S Single Base Substitution C-T INTERGENIC HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN1685-S.SNP.11:23402606 chr11:023402606 0 W/23402606-23402606 FN1685-S SNP T -> C AC=1;AN=188;BQB=0.970037;DP=3842;DP4=1648,2158,8,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.13647e-12;MQSB=0.974651;RPB=0.607389;SGB=74.9605;VDB=0.655069;EFF=INTERGENIC(MODIFIER||||||||||1) FN-207.SNP.11:23405362 chr11:023405362 0 W/23405362-23405362 FN-207 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN2151-S.SNP.11:23417138 chr11:023417138 0 W/23417138-23417138 FN2151-S SNP T -> A AC=1;AN=168;BQB=0.00320184;DP=3458;DP4=1782,1631,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.45167e-07;MQSB=0.992378;RPB=0.999943;SGB=-130.056;VDB=0.188248;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gTc|D457V|960|LOC_Os11g39330|protein_coding|CODING|LOC_Os11g39330.1|2|1) FN666-S.SNP.11:23420110 chr11:023420110 0 W/23420110-23420110 FN666-S Single Base Substitution T-C INTERGENIC HET SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN4271-S.SNP.11:23426205 chr11:023426205 0 W/23426205-23426205 FN4271-S SNP T -> C AC=1;AN=170;BQB=0.93998;DP=2970;DP4=1440,1438,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.117e-08;MQSB=0.989049;RPB=0.728085;SGB=48.6486;VDB=0.566522;EFF=INTRON(MODIFIER||||195|LOC_Os11g39350|protein_coding|CODING|LOC_Os11g39350.2|2|1),INTRON(MODIFIER||||195|LOC_Os11g39350|protein_coding|CODING|LOC_Os11g39350.1|2|1) FN4080-S.SNP.11:23432118 chr11:023432118 0 W/23432118-23432118 FN4080-S SNP A -> G AC=1;AN=182;BQB=0.71031;DP=2971;DP4=1351,1563,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.22085e-08;MQSB=0.95558;RPB=0.485491;SGB=39.1386;VDB=0.778595;EFF=UTR_3_PRIME(MODIFIER||116||528|LOC_Os11g39370|protein_coding|CODING|LOC_Os11g39370.2|11|1),INTRON(MODIFIER||||608|LOC_Os11g39370|protein_coding|CODING|LOC_Os11g39370.1|11|1) FN2592-S.SNP.11:23443905 chr11:023443905 0 W/23443905-23443905 FN2592-S SNP G -> A AC=2;AN=186;BQB=0.64764;DP=3435;DP4=1771,1318,26,7;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=4.30542e-15;MQSB=0.0977913;RPB=0.912134;SGB=146.046;VDB=0.343133;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L141|170|LOC_Os11g39380|protein_coding|CODING|LOC_Os11g39380.1|1|1) FN4189-S.SNP.11:23446167 chr11:023446167 0 W/23446167-23446167 FN4189-S SNP G -> C AC=2;AN=170;BQB=0.546361;DP=1253;DP4=1031,187,6,2;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=0.00073742;MQSB=6.11355e-05;RPB=0.933951;SGB=30.1021;VDB=0.89488;EFF=INTERGENIC(MODIFIER||||||||||1) FN4039-S.SNP.11:23448010 chr11:023448010 0 W/23448010-23448010 FN4039-S SNP G -> C AC=1;AN=168;BQB=0.993622;DP=3048;DP4=1515,1431,5,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.11751e-12;MQSB=0.697308;RPB=0.894967;SGB=92.0501;VDB=0.542666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.11:23450752 chr11:023450752 0 W/23450752-23450752 FN2309 SNP C -> T AC=1;AN=192;BQB=0.894564;DP=5128;DP4=2665,2236,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.00336e-08;MQSB=0.998752;RPB=0.957028;SGB=8.91915;VDB=0.621567;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.11:23451461 chr11:023451461 0 W/23451461-23451461 FN3767-S SNP A -> G AC=1;AN=190;BQB=0.984558;DP=3074;DP4=1389,1617,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.52816e-08;MQSB=0.999802;RPB=0.781048;SGB=43.2083;VDB=0.931625;EFF=INTERGENIC(MODIFIER||||||||||1) FN1509-S.SNP.11:23453604 chr11:023453604 0 W/23453604-23453604 FN1509-S Single Base Substitution G-A INTERGENIC HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. W554-1-1.SNP.11:23458346 chr11:023458346 0 W/23458346-23458346 W554-1-1 Single Base Substitution G-A INTRON HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1263-S.SNP.11:23470622 chr11:023470622 0 W/23470622-23470622 FN1263-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN2401.SNP.11:23474691 chr11:023474691 0 W/23474691-23474691 FN2401 SNP G -> T AC=1;AN=200;BQB=0.330755;DP=5045;DP4=2505,2188,17,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.86292e-20;MQSB=0.998629;RPB=0.450569;SGB=-2.21717;VDB=0.401051;EFF=INTRON(MODIFIER||||474|LOC_Os11g39420|protein_coding|CODING|LOC_Os11g39420.1|1|1) FN2428.SNP.11:23475978 chr11:023475978 0 W/23475978-23475978 FN2428 SNP G -> A AC=1;AN=200;BQB=0.967252;DP=4420;DP4=1945,2220,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000226244;MQB=6.36414e-08;MQSB=0.765553;RPB=0.994703;SGB=3.06925;VDB=0.752013;EFF=INTERGENIC(MODIFIER||||||||||1) FN977-S.SNP.11:23477518 chr11:023477518 0 W/23477518-23477518 FN977-S Single Base Substitution G-A INTERGENIC HET SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN3707-S.SNP.11:23485875 chr11:023485875 0 W/23485875-23485875 FN3707-S SNP G -> A AC=1;AN=190;BQB=0.987205;DP=2450;DP4=1308,1044,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44558e-06;MQSB=0.38404;RPB=0.826607;SGB=49.0954;VDB=0.065806;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.11:23486303 chr11:023486303 0 W/23486303-23486303 FN4304-S SNP T -> C AC=1;AN=170;BQB=0.893852;DP=2513;DP4=1140,1296,6,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.52839e-05;MQSB=0.999931;RPB=0.95245;SGB=30.1021;VDB=0.156658;EFF=INTERGENIC(MODIFIER||||||||||1) FN3561-S.SNP.11:23494313 chr11:023494313 0 W/23494313-23494313 FN3561-S SNP C -> T AC=2;AN=188;BQB=0.989246;DP=2488;DP4=1279,1111,29,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.99237e-23;MQSB=0.771362;RPB=0.992531;SGB=138.253;VDB=0.382097;EFF=INTRON(MODIFIER||||456|LOC_Os11g39450|protein_coding|CODING|LOC_Os11g39450.1|5|1) FN503-S.SNP.11:23497659 chr11:023497659 0 W/23497659-23497659 FN503-S Single Base Substitution C-G INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN2595-S.SNP.11:23497876 chr11:023497876 0 W/23497876-23497876 FN2595-S SNP C -> T AC=2;AN=186;BQB=0.70802;DP=3578;DP4=1672,1716,17,14;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0.00111794;MQB=2.12823e-15;MQSB=0.684842;RPB=0.463744;SGB=101.266;VDB=0.13102;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.11:23509455 chr11:023509455 0 W/23509455-23509455 FN-200 Single Base Substitution T-G INTRON HET SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN3385-S.SNP.11:23510447 chr11:023510447 0 W/23510447-23510447 FN3385-S SNP C -> T AC=1;AN=184;BQB=0.789942;DP=2568;DP4=1233,1248,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.62468e-10;MQSB=0.98793;RPB=0.79731;SGB=62.3078;VDB=0.923052;EFF=INTRON(MODIFIER||||837|LOC_Os11g39490|protein_coding|CODING|LOC_Os11g39490.1|6|1) FN3385-S.SNP.11:23510455 chr11:023510455 0 W/23510455-23510455 FN3385-S SNP A -> T AC=1;AN=184;BQB=0.904462;DP=2573;DP4=1241,1211,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.72347e-12;MQSB=0.995322;RPB=0.63612;SGB=75.8731;VDB=0.98325;EFF=INTRON(MODIFIER||||837|LOC_Os11g39490|protein_coding|CODING|LOC_Os11g39490.1|6|1) FN1313-S.SNP.11:23511347 chr11:023511347 0 W/23511347-23511347 FN1313-S Single Base Substitution G-C INTRON HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. W450-6-1.SNP.11:23514657 chr11:023514657 0 W/23514657-23514657 W450-6-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g39500 hypothetical protein SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN453-S.SNP.11:23514700 chr11:023514700 0 W/23514700-23514700 FN453-S Single Base Substitution T-A INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN453-S.SNP.11:23514706 chr11:023514706 0 W/23514706-23514706 FN453-S Single Base Substitution T-A INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN3296-S.SNP.11:23516051 chr11:023516051 0 W/23516051-23516051 FN3296-S SNP C -> G AC=1;AN=184;BQB=0.834927;DP=2761;DP4=1507,1163,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.52144e-08;MQSB=0.99993;RPB=0.571742;SGB=23.2751;VDB=0.119497;EFF=INTERGENIC(MODIFIER||||||||||1) FN3631-S.SNP.11:23520433 chr11:023520433 0 W/23520433-23520433 FN3631-S SNP A -> T AC=2;AN=190;BQB=0.995261;DP=2793;DP4=1238,1453,11,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.68753e-14;MQSB=0.648274;RPB=0.228124;SGB=51.7524;VDB=0.171222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.11:23523805 chr11:023523805 0 W/23523805-23523805 FN2696-S SNP T -> A AC=1;AN=200;BQB=0.476109;DP=5058;DP4=2356,2402,16,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2654e-18;MQSB=0.999197;RPB=0.999885;SGB=101.557;VDB=0.136255;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A424|1890|LOC_Os11g39510|protein_coding|CODING|LOC_Os11g39510.1|2|1) FN-50.SNP.11:23528183 chr11:023528183 0 W/23528183-23528183 FN-50 Single Base Substitution A-T INTRON Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN453-S.SNP.11:23530064 chr11:023530064 0 W/23530064-23530064 FN453-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g39510 retrotransposon protein, putative, unclassified, expressed SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN2191-S.SNP.11:23532492 chr11:023532492 0 W/23532492-23532492 FN2191-S SNP C -> G AC=1;AN=190;BQB=0.781846;DP=4041;DP4=1724,1942,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000742391;MQB=5.73552e-06;MQSB=0.373723;RPB=0.978316;SGB=15.9981;VDB=0.146167;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.11:23534434 chr11:023534434 0 W/23534434-23534434 FN3610-S SNP G -> T AC=1;AN=190;BQB=0.995667;DP=2918;DP4=1454,1297,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00514051;MQB=0.00395089;MQSB=9.25095e-06;RPB=0.914503;SGB=28.9929;VDB=0.649418;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.11:23534665 chr11:023534665 0 W/23534665-23534665 FN510-S Single Base Substitution A-G INTERGENIC HET SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN1097-S.SNP.11:23539614 chr11:023539614 0 W/23539614-23539614 FN1097-S Single Base Substitution A-T INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3447-S.SNP.11:23553047 chr11:023553047 0 W/23553047-23553047 FN3447-S SNP C -> T AC=1;AN=184;BQB=0.534081;DP=2567;DP4=1227,1265,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00038956;MQB=1.3626e-07;MQSB=0.987177;RPB=0.89319;SGB=23.2751;VDB=0.928093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2580-S.SNP.11:23553997 chr11:023553997 0 W/23553997-23553997 FN2580-S SNP A -> C AC=1;AN=198;BQB=0.804892;DP=4144;DP4=1906,2035,9,13;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=9.80779e-12;MQSB=0.797857;RPB=0.844954;SGB=95.5;VDB=0.527618;EFF=INTRON(MODIFIER||||230|LOC_Os11g39540|protein_coding|CODING|LOC_Os11g39540.1|5|1) FN2329.SNP.11:23560286 chr11:023560286 0 W/23560286-23560286 FN2329 SNP A -> G AC=1;AN=192;BQB=0.372441;DP=5321;DP4=2400,2601,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.09481e-11;MQSB=0.998381;RPB=0.679067;SGB=-10.2539;VDB=0.0178391;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.11:23561633 chr11:023561633 0 W/23561633-23561633 FN3438-S SNP A -> T AC=1;AN=184;BQB=0.258629;DP=2992;DP4=1398,1525,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.115e-10;MQSB=0.943529;RPB=0.820683;SGB=15.9331;VDB=0.403763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.11:23564110 chr11:023564110 0 W/23564110-23564110 FN2362 SNP G -> A AC=1;AN=192;BQB=0.288606;DP=5019;DP4=2143,2606,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000199243;MQB=3.60917e-08;MQSB=0.593897;RPB=0.88141;SGB=28.9139;VDB=0.98934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.11:23564310 chr11:023564310 0 W/23564310-23564310 FN1192-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN405-S.SNP.11:23568442 chr11:023568442 0 W/23568442-23568442 FN405-S Single Base Substitution A-T INTRON HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1586-S.SNP.11:23604662 chr11:023604662 0 W/23604662-23604662 FN1586-S Single Base Substitution C-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN3285-S.SNP.11:23604929 chr11:023604929 0 W/23604929-23604929 FN3285-S SNP G -> A AC=1;AN=184;BQB=0.871764;DP=3832;DP4=1972,1745,18,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.90344e-16;MQSB=0.999741;RPB=0.668994;SGB=85.0529;VDB=0.175438;EFF=INTERGENIC(MODIFIER||||||||||1) FN510-S.SNP.11:23605617 chr11:023605617 0 W/23605617-23605617 FN510-S Single Base Substitution C-T INTERGENIC HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3518-S.SNP.11:23610596 chr11:023610596 0 W/23610596-23610596 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.939082;DP=2663;DP4=1154,1400,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.68077e-07;MQSB=0.352698;RPB=0.997352;SGB=44.4357;VDB=0.671437;EFF=INTERGENIC(MODIFIER||||||||||1) FN3592-S.SNP.11:23613164 chr11:023613164 0 W/23613164-23613164 FN3592-S SNP T -> G AC=1;AN=188;BQB=0.997916;DP=2867;DP4=1386,1381,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87721e-07;MQSB=0.964257;RPB=0.995541;SGB=44.4357;VDB=0.784841;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.11:23614695 chr11:023614695 0 W/23614695-23614695 FN1307-S Single Base Substitution C-A INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN-32.SNP.11:23617133 chr11:023617133 0 W/23617133-23617133 FN-32 Single Base Substitution G-A INTRON Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN3050-S.SNP.11:23619690 chr11:023619690 0 W/23619690-23619690 FN3050-S SNP A -> G AC=2;AN=184;BQB=0.969736;DP=2861;DP4=1304,1374,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.08211e-09;MQSB=0.992117;RPB=0.18227;SGB=62.3078;VDB=0.835093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.11:23626081 chr11:023626081 0 W/23626081-23626081 FN2482 SNP G -> A AC=2;AN=200;BQB=0.978471;DP=5199;DP4=2515,2336,18,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.07538e-15;MQSB=0.284681;RPB=0.866856;SGB=118.737;VDB=0.241351;EFF=INTERGENIC(MODIFIER||||||||||1) FN2458.SNP.11:23627656 chr11:023627656 0 W/23627656-23627656 FN2458 SNP G -> C AC=1;AN=200;BQB=0.361191;DP=4893;DP4=2049,2566,8,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.84714e-05;MQSB=0.116001;RPB=0.695483;SGB=29.4541;VDB=0.288307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.11:23628011 chr11:023628011 0 W/23628011-23628011 FN1740-S SNP C -> T AC=1;AN=188;BQB=0.796312;DP=2621;DP4=545,2049,2,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.33909e-06;MQSB=0.427142;RPB=0.991322;SGB=-16.0863;VDB=0.94699;EFF=INTERGENIC(MODIFIER||||||||||1) FN2223-S.SNP.11:23628673 chr11:023628673 0 W/23628673-23628673 FN2223-S SNP C -> G AC=1;AN=190;BQB=0.967036;DP=4326;DP4=2132,1978,19,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.08139e-17;MQSB=0.835003;RPB=0.539777;SGB=-5.4677;VDB=0.563971;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctG|L101|509|LOC_Os11g39670|protein_coding|CODING|LOC_Os11g39670.1|2|1),START_GAINED(LOW||||382|LOC_Os11g39670|protein_coding|CODING|LOC_Os11g39670.2|2|1),UTR_5_PRIME(MODIFIER||946||382|LOC_Os11g39670|protein_coding|CODING|LOC_Os11g39670.2|2|1) FN3803-S.SNP.11:23636709 chr11:023636709 0 W/23636709-23636709 FN3803-S SNP C -> G AC=1;AN=190;BQB=0.903836;DP=3204;DP4=1657,1393,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00686642;MQB=5.54497e-08;MQSB=6.41012e-06;RPB=0.887406;SGB=53.8699;VDB=0.00761873;EFF=INTERGENIC(MODIFIER||||||||||1) FN1517-S.SNP.11:23638050 chr11:023638050 0 W/23638050-23638050 FN1517-S Single Base Substitution C-T INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN2725-S.SNP.11:23639822 chr11:023639822 0 W/23639822-23639822 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.998692;DP=5248;DP4=2676,2262,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.00662e-08;MQSB=0.956459;RPB=0.324261;SGB=9.48993;VDB=0.276208;EFF=INTERGENIC(MODIFIER||||||||||1) FN805-S.SNP.11:23653238 chr11:023653238 0 W/23653238-23653238 FN805-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1084-S.SNP.11:23654690 chr11:023654690 0 W/23654690-23654690 FN1084-S Single Base Substitution T-C INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN_769-4-1.SNP.11:23674967 chr11:023674967 0 W/23674967-23674967 FN_769-4-1 Single Base Substitution G-A Homo SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1693-S.SNP.11:23679491 chr11:023679491 0 W/23679491-23679491 FN1693-S SNP G -> T AC=1;AN=188;BQB=0.0708904;DP=4245;DP4=2187,2023,6,23;HOB=5.65867e-05;ICB=0.000113775;MQ=11;MQ0F=0.518257;MQB=0.00628146;MQSB=0;RPB=0.98395;SGB=-108.551;VDB=0.976523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1720-S.SNP.11:23684821 chr11:023684821 0 W/23684821-23684821 FN1720-S SNP C -> T AC=2;AN=188;BQB=0.0161026;DP=2012;DP4=860,1105,13,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.01537e-06;MQSB=0.998454;RPB=0.912266;SGB=-101.181;VDB=0.617087;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.11:23686632 chr11:023686632 0 W/23686632-23686632 FN1684-S SNP G -> A AC=1;AN=188;BQB=0.0355997;DP=3716;DP4=2085,1566,15,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.92025e-11;MQSB=0.967252;RPB=0.865345;SGB=-40.1048;VDB=0.911042;EFF=INTERGENIC(MODIFIER||||||||||1) FN4040-S.SNP.11:23690217 chr11:023690217 0 W/23690217-23690217 FN4040-S SNP C -> T AC=2;AN=168;BQB=0.926021;DP=2193;DP4=697,1390,6,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.82448e-11;MQSB=0.812621;RPB=0.931857;SGB=92.0501;VDB=0.9498;EFF=INTERGENIC(MODIFIER||||||||||1) FN1192-S.SNP.11:23690950 chr11:023690950 0 W/23690950-23690950 FN1192-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN3945-S.SNP.11:23690950 chr11:023690950 0 W/23690950-23690950 FN3945-S SNP C -> A AC=2;AN=168;BQB=0.965104;DP=1936;DP4=1052,785,12,2;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.42801e-06;MQSB=0.784734;RPB=0.586527;SGB=56.6036;VDB=0.2043;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.11:23690950 chr11:023690950 0 W/23690950-23690950 FN754-S Single Base Substitution C-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1279-S.SNP.11:23695413 chr11:023695413 0 W/23695413-23695413 FN1279-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2334.SNP.11:23697777 chr11:023697777 0 W/23697777-23697777 FN2334 SNP A -> C AC=1;AN=192;BQB=0.930378;DP=4904;DP4=2400,2167,9,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.21658e-06;MQSB=0.999955;RPB=0.828439;SGB=32.6514;VDB=0.0436431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3386-S.SNP.11:23719192 chr11:023719192 0 W/23719192-23719192 FN3386-S SNP G -> C AC=1;AN=184;BQB=0.988748;DP=3935;DP4=2122,1708,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00203304;MQB=8.67959e-07;MQSB=0.661065;RPB=0.522446;SGB=93.9603;VDB=0.205333;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R239G|1783|LOC_Os11g39790|protein_coding|CODING|LOC_Os11g39790.1|1|1) FN684-S.SNP.11:23739833 chr11:023739833 0 W/23739833-23739833 FN684-S Single Base Substitution C-T INTERGENIC HET SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN777-S.SNP.11:23741887 chr11:023741887 0 W/23741887-23741887 FN777-S Single Base Substitution C-G INTERGENIC HOMO SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN1277-S.SNP.11:23742277 chr11:023742277 0 W/23742277-23742277 FN1277-S Single Base Substitution A-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1277-S.SNP.11:23742278 chr11:023742278 0 W/23742278-23742278 FN1277-S Single Base Substitution G-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN-401.SNP.11:23748331 chr11:023748331 0 W/23748331-23748331 FN-401 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g39830 expressed protein SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.11:23748331 chr11:023748331 0 W/23748331-23748331 FN401-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g39830 expressed protein SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. W577-3-1.SNP.11:23751434 chr11:023751434 0 W/23751434-23751434 W577-3-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2190-S.SNP.11:23751653 chr11:023751653 0 W/23751653-23751653 FN2190-S SNP C -> A AC=1;AN=190;BQB=0.981039;DP=4599;DP4=1888,2424,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.57477e-06;MQSB=0.546973;RPB=0.913183;SGB=-0.550503;VDB=0.982862;EFF=INTERGENIC(MODIFIER||||||||||1) FN941-S.SNP.11:23757903 chr11:023757903 0 W/23757903-23757903 FN941-S Single Base Substitution T-A INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN584-S.SNP.11:23758251 chr11:023758251 0 W/23758251-23758251 FN584-S Single Base Substitution C-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN-231.SNP.11:23761178 chr11:023761178 0 W/23761178-23761178 FN-231 Single Base Substitution C-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN3900-S.SNP.11:23762368 chr11:023762368 0 W/23762368-23762368 FN3900-S SNP G -> T AC=1;AN=158;BQB=0.883592;DP=1931;DP4=769,1084,2,9;HOB=8.01154e-05;ICB=0.000161245;MQ=44;MQ0F=0.0170896;MQB=0.0173955;MQSB=0.0098225;RPB=0.766028;SGB=42.6978;VDB=0.753144;EFF=INTERGENIC(MODIFIER||||||||||1) FN1496-S.SNP.11:23763087 chr11:023763087 0 W/23763087-23763087 FN1496-S Single Base Substitution C-T INTERGENIC HET SNo: 1256, Mutant_ID: FN1496-S, Generation: M2, Mutations: 76, Genes: 13, Seed availability: Yes. FN3937-S.SNP.11:23763763 chr11:023763763 0 W/23763763-23763763 FN3937-S SNP G -> A AC=2;AN=158;BQB=0.987432;DP=2710;DP4=1518,1048,16,11;HOB=0.024996;ICB=0.493752;MQ=42;MQ0F=0.0114391;MQB=0.0186238;MQSB=0.810037;RPB=0.939604;SGB=18.5195;VDB=0.266704;EFF=INTERGENIC(MODIFIER||||||||||1) FN1036-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN1036-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1196-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN1196-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1338-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN1338-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1643-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN1643-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2431.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN2431 SNP C -> A AC=1;AN=200;BQB=0.0766764;DP=3714;DP4=1774,1667,14,4;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0368875;MQB=0.0444047;MQSB=4.72505e-18;RPB=0.990674;SGB=-80.9107;VDB=0.0932976;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN3449-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN3449-S SNP C -> A AC=2;AN=184;BQB=0.96684;DP=3518;DP4=1797,1584,27,20;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0.0378056;MQB=0.5202;MQSB=1.23403e-05;RPB=0.920155;SGB=0.939641;VDB=0.426442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN3557-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN3557-S SNP C -> A AC=2;AN=188;BQB=0.994605;DP=3934;DP4=1951,1842,35,18;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.0355872;MQB=0.996657;MQSB=4.40042e-11;RPB=0.999963;SGB=-52.4358;VDB=0.37712;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN3723-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN3723-S SNP C -> A AC=1;AN=190;BQB=0.996296;DP=2042;DP4=1053,899,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0538688;MQB=0.979823;MQSB=0.554679;RPB=0.672949;SGB=-2.10437;VDB=0.0569844;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN3834-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN3834-S SNP C -> A AC=1;AN=190;BQB=0.560446;DP=2679;DP4=1353,1222,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0425532;MQB=0.667352;MQSB=0.0445852;RPB=0.439609;SGB=53.6492;VDB=0.192647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN3864-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN3864-S SNP C -> A AC=2;AN=158;BQB=0.741108;DP=2195;DP4=1047,1041,13,17;HOB=0.024996;ICB=0.493752;MQ=37;MQ0F=0.0501139;MQB=0.563714;MQSB=0.570668;RPB=0.766827;SGB=22.6279;VDB=0.62965;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN4040-S.SNP.11:23768054 chr11:023768054 0 W/23768054-23768054 FN4040-S SNP C -> A AC=2;AN=168;BQB=0.991412;DP=2369;DP4=1222,1027,14,8;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0476995;MQB=0.582207;MQSB=0.00728837;RPB=0.655801;SGB=12.7756;VDB=0.622983;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1290H|1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN2387.SNP.11:23769505 chr11:023769505 0 W/23769505-23769505 FN2387 SNP C -> T AC=1;AN=192;BQB=0.353481;DP=4855;DP4=2634,2015,9,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.0053553;MQB=7.35401e-05;MQSB=0.991285;RPB=0.217182;SGB=-14.7687;VDB=0.351783;EFF=INTRON(MODIFIER||||1659|LOC_Os11g39870|protein_coding|CODING|LOC_Os11g39870.1|3|1) FN714-S.SNP.11:23776983 chr11:023776983 0 W/23776983-23776983 FN714-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g39890 retrotransposon protein, putative, unclassified SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN4093-S.SNP.11:23780272 chr11:023780272 0 W/23780272-23780272 FN4093-S SNP G -> A AC=1;AN=182;BQB=0.880345;DP=2868;DP4=1624,1177,11,3;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.00209205;MQB=0.201839;MQSB=0.911675;RPB=0.886291;SGB=57.644;VDB=0.351645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R234W|992|LOC_Os11g39900|protein_coding|CODING|LOC_Os11g39900.1|1|1) FN2194-S.SNP.11:23788640 chr11:023788640 0 W/23788640-23788640 FN2194-S SNP T -> A AC=1;AN=190;BQB=0.893931;DP=4632;DP4=2146,1984,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000215889;MQB=5.88389e-12;MQSB=0.435986;RPB=0.983736;SGB=68.0854;VDB=0.470596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F52I|93|LOC_Os11g39910|protein_coding|CODING|LOC_Os11g39910.1|2|1) FN506-S.SNP.11:23790768 chr11:023790768 0 W/23790768-23790768 FN506-S Single Base Substitution T-A INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN506-S.SNP.11:23792555 chr11:023792555 0 W/23792555-23792555 FN506-S Single Base Substitution G-C INTRON HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN-251.SNP.11:23795522 chr11:023795522 0 W/23795522-23795522 FN-251 Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2540-S.SNP.11:23795746 chr11:023795746 0 W/23795746-23795746 FN2540-S SNP G -> A AC=1;AN=192;BQB=0.32839;DP=3819;DP4=1673,1881,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.66421e-06;MQSB=0.0366337;RPB=0.860663;SGB=32.9588;VDB=0.513973;EFF=UTR_3_PRIME(MODIFIER||229||716|LOC_Os11g39920|protein_coding|CODING|LOC_Os11g39920.1|2|1) FN3630-S.SNP.11:23799614 chr11:023799614 0 W/23799614-23799614 FN3630-S SNP C -> A AC=1;AN=190;BQB=0.947874;DP=2845;DP4=1358,1370,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.17217e-05;MQSB=0.913346;RPB=0.643025;SGB=25.439;VDB=0.602433;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D393Y|709|LOC_Os11g39940|protein_coding|CODING|LOC_Os11g39940.1|1|1) FN-392.SNP.11:23800815 chr11:023800815 0 W/23800815-23800815 FN-392 Single Base Substitution A-T INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN-392.SNP.11:23804003 chr11:023804003 0 W/23804003-23804003 FN-392 Single Base Substitution G-C INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN-392.SNP.11:23804588 chr11:023804588 0 W/23804588-23804588 FN-392 Single Base Substitution G-T INTERGENIC HET SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN448-S.SNP.11:23805056 chr11:023805056 0 W/23805056-23805056 FN448-S Single Base Substitution C-T INTERGENIC HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN568-S.SNP.11:23808694 chr11:023808694 0 W/23808694-23808694 FN568-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1717-S.SNP.11:23814739 chr11:023814739 0 W/23814739-23814739 FN1717-S SNP G -> C AC=1;AN=188;BQB=0.954042;DP=3909;DP4=1654,2200,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=16;MQ0F=0.422359;MQB=0.592093;MQSB=4.18053e-16;RPB=0.949146;SGB=14.798;VDB=0.0535963;EFF=INTERGENIC(MODIFIER||||||||||1) FN3758-S.SNP.11:23814776 chr11:023814776 0 W/23814776-23814776 FN3758-S SNP T -> G AC=2;AN=190;BQB=0.941834;DP=2811;DP4=1467,1207,14,12;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.165422;MQB=0.967399;MQSB=1.87937e-18;RPB=0.606967;SGB=82.301;VDB=0.454271;EFF=INTERGENIC(MODIFIER||||||||||1) FN4121-S.SNP.11:23814776 chr11:023814776 0 W/23814776-23814776 FN4121-S SNP T -> G AC=2;AN=182;BQB=0.84341;DP=2901;DP4=1586,1204,10,10;HOB=0.0217365;ICB=0.494567;MQ=29;MQ0F=0.179249;MQB=0.97916;MQSB=0;RPB=0.882461;SGB=60.2037;VDB=0.232344;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN-82 Single Base Substitution G-A INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN1135-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN1135-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1715-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN1715-S SNP G -> A AC=2;AN=188;BQB=0.870795;DP=2992;DP4=1786,1142,17,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000334225;MQB=6.04524e-13;MQSB=7.27831e-07;RPB=0.689655;SGB=64.2256;VDB=0.920874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.287918;DP=3395;DP4=1950,1361,26,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000294551;MQB=2.18839e-17;MQSB=1.24153e-07;RPB=0.837763;SGB=-53.7345;VDB=0.881422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2197-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN2197-S SNP G -> A AC=2;AN=190;BQB=0.462891;DP=5144;DP4=2577,2234,9,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000194401;MQB=4.48617e-11;MQSB=0.0414628;RPB=0.850052;SGB=68.0854;VDB=0.738494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN2765-S SNP G -> A AC=2;AN=188;BQB=0.864922;DP=4014;DP4=2055,1727,24,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000249128;MQB=2.64887e-18;MQSB=0.00153118;RPB=0.98851;SGB=173.617;VDB=0.738545;EFF=INTERGENIC(MODIFIER||||||||||1) FN3423-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN3423-S SNP G -> A AC=2;AN=184;BQB=0.985851;DP=3146;DP4=1593,1435,7,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000317864;MQB=5.90181e-13;MQSB=0.000282582;RPB=0.990793;SGB=107.526;VDB=0.730547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3556-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN3556-S SNP G -> A AC=2;AN=188;BQB=0.935362;DP=3054;DP4=1556,1383,18,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000327439;MQB=1.71048e-26;MQSB=0.00129468;RPB=0.96349;SGB=153.536;VDB=0.228423;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN3821-S SNP G -> A AC=2;AN=190;BQB=0.822626;DP=2950;DP4=1529,1310,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000338983;MQB=4.10418e-17;MQSB=0.00129289;RPB=0.444545;SGB=135.619;VDB=0.369475;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN463-S Single Base Substitution G-A INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN806-S.SNP.11:23816458 chr11:023816458 0 W/23816458-23816458 FN806-S Single Base Substitution G-A INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1424-S.SNP.11:23817490 chr11:023817490 0 W/23817490-23817490 FN1424-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN689-S.SNP.11:23819319 chr11:023819319 0 W/23819319-23819319 FN689-S Single Base Substitution G-A INTERGENIC HET SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN2352.SNP.11:23822340 chr11:023822340 0 W/23822340-23822340 FN2352 SNP G -> A AC=1;AN=192;BQB=0.440736;DP=4851;DP4=2074,2471,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.54624e-14;MQSB=0.95585;RPB=0.966971;SGB=68.2948;VDB=0.593899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2352.SNP.11:23822342 chr11:023822342 0 W/23822342-23822342 FN2352 SNP G -> A AC=1;AN=192;BQB=0.479234;DP=4868;DP4=2098,2498,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.27186e-13;MQSB=0.922973;RPB=0.98188;SGB=90.2896;VDB=0.49039;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.11:23831029 chr11:023831029 0 W/23831029-23831029 FN4240-S SNP A -> T AC=1;AN=170;BQB=0.951207;DP=2509;DP4=1134,1290,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.29107e-05;MQSB=0.8089;RPB=0.537041;SGB=24.5502;VDB=0.346864;EFF=INTERGENIC(MODIFIER||||||||||1) FN1635-S.SNP.11:23831774 chr11:023831774 0 W/23831774-23831774 FN1635-S SNP A -> C AC=1;AN=188;BQB=0.651445;DP=4154;DP4=1954,2175,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53735e-07;MQSB=0.993153;RPB=0.893251;SGB=18.4463;VDB=0.477712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.11:23838192 chr11:023838192 0 W/23838192-23838192 FN2125-S SNP G -> A AC=2;AN=168;BQB=0.51103;DP=3713;DP4=1224,2435,7,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.35682e-18;MQSB=0.975911;RPB=0.498356;SGB=118.635;VDB=0.111303;EFF=INTERGENIC(MODIFIER||||||||||1) FN1645-S.SNP.11:23839953 chr11:023839953 0 W/23839953-23839953 FN1645-S Single Base Substitution G-C INTERGENIC HET SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN778-S.SNP.11:23858455 chr11:023858455 0 W/23858455-23858455 FN778-S Single Base Substitution G-C INTRON HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN-237.SNP.11:23859302 chr11:023859302 0 W/23859302-23859302 FN-237 Single Base Substitution T-A UTR_3_PRIME HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2715-S.SNP.11:23859421 chr11:023859421 0 W/23859421-23859421 FN2715-S SNP G -> A AC=1;AN=200;BQB=0.794254;DP=4657;DP4=2393,2005,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.31038e-13;MQSB=0.999146;RPB=0.888038;SGB=86.5007;VDB=0.136722;EFF=UTR_3_PRIME(MODIFIER||190||245|LOC_Os11g40009|protein_coding|CODING|LOC_Os11g40009.2|3|1),UTR_3_PRIME(MODIFIER||190||245|LOC_Os11g40009|protein_coding|CODING|LOC_Os11g40009.1|3|1) FN-144.SNP.11:23861834 chr11:023861834 0 W/23861834-23861834 FN-144 Single Base Substitution A-G INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1221-S.SNP.11:23865838 chr11:023865838 0 W/23865838-23865838 FN1221-S Single Base Substitution C-T INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2420.SNP.11:23866848 chr11:023866848 0 W/23866848-23866848 FN2420 SNP G -> C AC=1;AN=200;BQB=0.997373;DP=3593;DP4=1994,1162,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98739e-12;MQSB=0.857816;RPB=0.79796;SGB=-11.8999;VDB=0.384967;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A144|214|LOC_Os11g40030|protein_coding|CODING|LOC_Os11g40030.1|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A144|225|LOC_Os11g40030|protein_coding|CODING|LOC_Os11g40030.2|2|1) FN705-S.SNP.11:23872871 chr11:023872871 0 W/23872871-23872871 FN705-S Single Base Substitution T-C INTERGENIC HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN2138-S.SNP.11:23872934 chr11:023872934 0 W/23872934-23872934 FN2138-S SNP C -> G AC=1;AN=168;BQB=0.994949;DP=4015;DP4=1887,2070,11,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.8284e-12;MQSB=0.975747;RPB=0.530342;SGB=-43.4892;VDB=0.631022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.11:23879726 chr11:023879726 0 W/23879726-23879726 FN1273-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g40050 retrotransposon protein, putative, unclassified, expressed SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN963-S.SNP.11:23880083 chr11:023880083 0 W/23880083-23880083 FN963-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g40050 retrotransposon protein, putative, unclassified, expressed SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN429-S.SNP.11:23881667 chr11:023881667 0 W/23881667-23881667 FN429-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g40050 retrotransposon protein, putative, unclassified, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN1423-S.SNP.11:23882804 chr11:023882804 0 W/23882804-23882804 FN1423-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN2542-S.SNP.11:23883200 chr11:023883200 0 W/23883200-23883200 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.176357;DP=3586;DP4=1742,1668,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0103179;MQB=0.000377163;MQSB=0.995423;RPB=0.509989;SGB=50.9344;VDB=0.485196;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1726|1911|LOC_Os11g40060|protein_coding|CODING|LOC_Os11g40060.1|4|1) FN3545-S.SNP.11:23885029 chr11:023885029 0 W/23885029-23885029 FN3545-S SNP G -> A AC=1;AN=188;BQB=0.885481;DP=3863;DP4=1815,1975,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00802485;MQB=0.00623569;MQSB=2.64341e-13;RPB=0.508769;SGB=58.0655;VDB=0.492201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P1117S|1911|LOC_Os11g40060|protein_coding|CODING|LOC_Os11g40060.1|4|1) FN3651-S.SNP.11:23886392 chr11:023886392 0 W/23886392-23886392 FN3651-S SNP C -> T AC=2;AN=190;BQB=0.808199;DP=2743;DP4=1379,1285,7,19;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0459351;MQB=0.908909;MQSB=1.08088e-05;RPB=0.301438;SGB=112.85;VDB=0.387213;EFF=INTRON(MODIFIER||||1911|LOC_Os11g40060|protein_coding|CODING|LOC_Os11g40060.1|2|1) FN1647-S.SNP.11:23888053 chr11:023888053 0 W/23888053-23888053 FN1647-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN2345.SNP.11:23889653 chr11:023889653 0 W/23889653-23889653 FN2345 SNP G -> A AC=2;AN=192;BQB=0.0420845;DP=4832;DP4=2211,2258,43,36;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0.120654;MQB=0.797777;MQSB=7.71091e-10;RPB=0.257161;SGB=349.465;VDB=0.41274;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.11:23890343 chr11:023890343 0 W/23890343-23890343 FN2638-S SNP G -> A AC=2;AN=200;BQB=0.996391;DP=4693;DP4=2298,2158,27,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.08116e-23;MQSB=0.996184;RPB=0.241701;SGB=201.63;VDB=0.452736;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.11:23892125 chr11:023892125 0 W/23892125-23892125 FN3717-S SNP G -> A AC=1;AN=190;BQB=0.746873;DP=2962;DP4=1218,1612,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.90411e-06;MQSB=0.446796;RPB=0.410374;SGB=28.9928;VDB=0.815111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.11:23896656 chr11:023896656 0 W/23896656-23896656 FN2781-S SNP A -> T AC=1;AN=198;BQB=0.879503;DP=3823;DP4=1626,1960,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.34411e-07;MQSB=0.0366235;RPB=0.934342;SGB=32.9588;VDB=0.248535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.11:23899845 chr11:023899845 0 W/23899845-23899845 FN3387-S SNP T -> A AC=2;AN=184;BQB=0.986001;DP=3038;DP4=1569,1351,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.41531e-17;MQSB=0.746815;RPB=0.287073;SGB=53.5365;VDB=0.148312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3886-S.SNP.11:23908975 chr11:023908975 0 W/23908975-23908975 FN3886-S SNP T -> C AC=2;AN=158;BQB=0.932218;DP=2464;DP4=1198,1154,9,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.83129e-11;MQSB=0.907008;RPB=0.832064;SGB=90.7616;VDB=0.52706;EFF=UTR_3_PRIME(MODIFIER||354||1387|LOC_Os11g40080|protein_coding|CODING|LOC_Os11g40080.1|11|1) FN4247-S.SNP.11:23916640 chr11:023916640 0 W/23916640-23916640 FN4247-S SNP C -> T AC=1;AN=170;BQB=0.973266;DP=2314;DP4=1068,1166,3,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.0067e-08;MQSB=0.94964;RPB=0.362246;SGB=52.3148;VDB=0.534909;EFF=INTRON(MODIFIER||||127|LOC_Os11g40100|protein_coding|CODING|LOC_Os11g40100.1|1|1),INTRON(MODIFIER||||205|LOC_Os11g40100|protein_coding|CODING|LOC_Os11g40100.3|1|1) FN4247-S.SNP.11:23916642 chr11:023916642 0 W/23916642-23916642 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.971566;DP=2310;DP4=1052,1163,4,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.58668e-07;MQSB=0.981169;RPB=0.976025;SGB=17.4413;VDB=0.83439;EFF=INTRON(MODIFIER||||127|LOC_Os11g40100|protein_coding|CODING|LOC_Os11g40100.1|1|1),INTRON(MODIFIER||||205|LOC_Os11g40100|protein_coding|CODING|LOC_Os11g40100.3|1|1) FN2625-S.SNP.11:23918999 chr11:023918999 0 W/23918999-23918999 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.808626;DP=5422;DP4=3103,2060,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69367e-17;MQSB=0.969283;RPB=0.63221;SGB=87.1368;VDB=0.0561993;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.11:23922724 chr11:023922724 0 W/23922724-23922724 FN2317 SNP C -> T AC=1;AN=192;BQB=0.906479;DP=5121;DP4=2548,2320,9,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.77102e-12;MQSB=0.936858;RPB=0.980282;SGB=34.0426;VDB=0.65451;EFF=INTERGENIC(MODIFIER||||||||||1) FN1268-S.SNP.11:23924334 chr11:023924334 0 W/23924334-23924334 FN1268-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN911-S.SNP.11:23936704 chr11:023936704 0 W/23936704-23936704 FN911-S Single Base Substitution C-T INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN-84.SNP.11:23955425 chr11:023955425 0 W/23955425-23955425 FN-84 Single Base Substitution A-T INTERGENIC HOMO SNo: 84, Mutant_ID: FN-84, Generation: M2, Mutations: 45, Genes: 15, Seed availability: Yes. FN2147-S.SNP.11:23956040 chr11:023956040 0 W/23956040-23956040 FN2147-S SNP G -> A AC=1;AN=168;BQB=0.0611892;DP=3844;DP4=1909,1888,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.67793e-05;MQSB=0.977252;RPB=0.982402;SGB=-127.497;VDB=0.987356;EFF=INTERGENIC(MODIFIER||||||||||1) FN347-S.SNP.11:23961338 chr11:023961338 0 W/23961338-23961338 FN347-S Single Base Substitution T-A INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN-188.SNP.11:23970129 chr11:023970129 0 W/23970129-23970129 FN-188 Single Base Substitution G-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2475.SNP.11:23970431 chr11:023970431 0 W/23970431-23970431 FN2475 SNP C -> T AC=1;AN=200;BQB=0.737317;DP=4368;DP4=2057,1918,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.62986e-06;MQSB=0.0087976;RPB=0.755582;SGB=24.2746;VDB=0.80572;EFF=INTERGENIC(MODIFIER||||||||||1) FN2215-S.SNP.11:23974393 chr11:023974393 0 W/23974393-23974393 FN2215-S SNP A -> G AC=2;AN=190;BQB=0.858417;DP=5097;DP4=2003,2367,30,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.19392e-23;MQSB=0.332787;RPB=0.804127;SGB=235.804;VDB=0.22948;EFF=INTERGENIC(MODIFIER||||||||||1) FN459-S.SNP.11:23980755 chr11:023980755 0 W/23980755-23980755 FN459-S Single Base Substitution A-G INTERGENIC HOMO SNo: 458, Mutant_ID: FN459-S, Generation: M2, Mutations: 65, Genes: 29, Seed availability: Yes. FN466-S.SNP.11:23993219 chr11:023993219 0 W/23993219-23993219 FN466-S Single Base Substitution G-A INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN927-S.SNP.11:23995148 chr11:023995148 0 W/23995148-23995148 FN927-S Single Base Substitution G-A INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1721-S.SNP.11:23998869 chr11:023998869 0 W/23998869-23998869 FN1721-S SNP G -> A AC=1;AN=188;BQB=0.0365784;DP=2238;DP4=886,1316,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.27049e-06;MQSB=0.65246;RPB=0.980285;SGB=8.62479;VDB=0.429688;EFF=INTRON(MODIFIER||||360|LOC_Os11g40230|protein_coding|CODING|LOC_Os11g40230.1|1|1) FN2555-S.SNP.11:24001401 chr11:024001401 0 W/24001401-24001401 FN2555-S SNP T -> C AC=2;AN=188;BQB=0.97793;DP=3630;DP4=1451,1886,16,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.94929e-18;MQSB=0.857153;RPB=0.993527;SGB=-42.7137;VDB=0.828734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2662-S.SNP.11:24003594 chr11:024003594 0 W/24003594-24003594 FN2662-S SNP G -> A AC=1;AN=200;BQB=0.929131;DP=5002;DP4=2300,2472,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.87699e-09;MQSB=0.991663;RPB=0.993049;SGB=47.4799;VDB=0.996056;EFF=INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.1|1|1),INTRON(MODIFIER||||151|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.2|1|1),INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.4|1|1),INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.3|1|1) FN2198-S.SNP.11:24005114 chr11:024005114 0 W/24005114-24005114 FN2198-S SNP G -> A AC=1;AN=190;BQB=0.79548;DP=5377;DP4=2574,2452,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46715e-12;MQSB=0.998416;RPB=0.999903;SGB=36.4291;VDB=0.999872;EFF=INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.3|1|1),INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.1|3|1),INTRON(MODIFIER||||151|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.2|3|1),INTRON(MODIFIER||||371|LOC_Os11g40249|protein_coding|CODING|LOC_Os11g40249.4|3|1) FN1512-S.SNP.11:24007329 chr11:024007329 0 W/24007329-24007329 FN1512-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g40249 expressed protein SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2471.SNP.11:24021053 chr11:024021053 0 W/24021053-24021053 FN2471 SNP G -> A AC=1;AN=200;BQB=0.154351;DP=4305;DP4=1985,2030,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000232288;MQB=6.12657e-20;MQSB=0.951388;RPB=0.418546;SGB=35.1726;VDB=0.92758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.11:24032846 chr11:024032846 0 W/24032846-24032846 FN2296 SNP C -> T AC=2;AN=192;BQB=0.264141;DP=4935;DP4=2442,2115,21,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000202634;MQB=3.84863e-24;MQSB=0.183959;RPB=0.888984;SGB=4.98351;VDB=0.922341;EFF=UTR_5_PRIME(MODIFIER||319||166|LOC_Os11g40315|protein_coding|CODING|LOC_Os11g40315.1|1|1) FN1283-S.SNP.11:24033531 chr11:024033531 0 W/24033531-24033531 FN1283-S Single Base Substitution G-A START_GAINED HET LOC_Os11g40315 retrotransposon protein, putative, unclassified, expressed SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3991-S.SNP.11:24036268 chr11:024036268 0 W/24036268-24036268 FN3991-S SNP T -> A AC=2;AN=168;BQB=0.99592;DP=2814;DP4=1383,1313,13,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.2439e-12;MQSB=0.938726;RPB=0.536265;SGB=92.0501;VDB=0.68894;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.11:24056988 chr11:024056988 0 W/24056988-24056988 FN-265 Single Base Substitution G-A INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3838-S.SNP.11:24057797 chr11:024057797 0 W/24057797-24057797 FN3838-S SNP C -> G AC=2;AN=190;BQB=0.733309;DP=3039;DP4=1142,1726,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.82122e-13;MQSB=0.984911;RPB=0.778257;SGB=126.511;VDB=0.288054;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.11:24057930 chr11:024057930 0 W/24057930-24057930 FN1701-S SNP T -> A AC=1;AN=188;BQB=0.596294;DP=3836;DP4=2076,1719,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11178e-09;MQSB=0.974299;RPB=0.34899;SGB=-11.74;VDB=0.0903096;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.11:24067733 chr11:024067733 0 W/24067733-24067733 FN2482 SNP C -> A AC=2;AN=200;BQB=0.668154;DP=4514;DP4=2250,2011,14,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.29466e-16;MQSB=0.923879;RPB=0.801712;SGB=90.7419;VDB=0.634609;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K226N|372|LOC_Os11g40370|protein_coding|CODING|LOC_Os11g40370.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K226N|372|LOC_Os11g40370|protein_coding|CODING|LOC_Os11g40370.2|4|1) FN2482.SNP.11:24067734 chr11:024067734 0 W/24067734-24067734 FN2482 SNP T -> A AC=2;AN=200;BQB=0.209192;DP=4532;DP4=2181,1968,13,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.26028e-15;MQSB=0.976482;RPB=0.74776;SGB=-5.84819;VDB=0.820159;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K226M|372|LOC_Os11g40370|protein_coding|CODING|LOC_Os11g40370.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K226M|372|LOC_Os11g40370|protein_coding|CODING|LOC_Os11g40370.2|4|1) FN1072-S.SNP.11:24083107 chr11:024083107 0 W/24083107-24083107 FN1072-S Single Base Substitution C-G INTERGENIC HOMO SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN1413-S.SNP.11:24083589 chr11:024083589 0 W/24083589-24083589 FN1413-S Single Base Substitution C-T INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN1413-S.SNP.11:24083590 chr11:024083590 0 W/24083590-24083590 FN1413-S Single Base Substitution G-T INTERGENIC HET SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2536-S.SNP.11:24090258 chr11:024090258 0 W/24090258-24090258 FN2536-S SNP G -> T AC=1;AN=188;BQB=0.832491;DP=3948;DP4=2022,1732,5,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.1469e-05;MQSB=0.98469;RPB=0.273542;SGB=26.5745;VDB=0.545382;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A539|722|LOC_Os11g40410|protein_coding|CODING|LOC_Os11g40410.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A508|691|LOC_Os11g40410|protein_coding|CODING|LOC_Os11g40410.1|3|1) FN2536-S.SNP.11:24090259 chr11:024090259 0 W/24090259-24090259 FN2536-S SNP G -> T AC=1;AN=188;BQB=0.997943;DP=3951;DP4=2003,1771,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06588e-05;MQSB=0.99995;RPB=0.206836;SGB=18.5788;VDB=0.303943;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A539D|722|LOC_Os11g40410|protein_coding|CODING|LOC_Os11g40410.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A508D|691|LOC_Os11g40410|protein_coding|CODING|LOC_Os11g40410.1|3|1) FN543-S.SNP.11:24115647 chr11:024115647 0 W/24115647-24115647 FN543-S Single Base Substitution C-T INTERGENIC HET SNo: 539, Mutant_ID: FN543-S, Generation: M2, Mutations: 79, Genes: 96, Seed availability: Yes. FN2664-S.SNP.11:24118545 chr11:024118545 0 W/24118545-24118545 FN2664-S SNP A -> T AC=1;AN=200;BQB=0.9974;DP=4532;DP4=2047,2254,10,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.64796e-18;MQSB=0.354894;RPB=0.638178;SGB=97.9523;VDB=0.941657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3438-S.SNP.11:24118545 chr11:024118545 0 W/24118545-24118545 FN3438-S SNP A -> T AC=2;AN=184;BQB=0.997808;DP=2548;DP4=994,1420,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.41815e-12;MQSB=0.993372;RPB=0.988804;SGB=98.4821;VDB=0.637985;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.11:24118545 chr11:024118545 0 W/24118545-24118545 FN985-S Single Base Substitution A-T INTERGENIC HOMO SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN2226-S.SNP.11:24122225 chr11:024122225 0 W/24122225-24122225 FN2226-S SNP T -> C AC=2;AN=190;BQB=0.663142;DP=4915;DP4=2282,2125,28,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.63644e-19;MQSB=0.979425;RPB=0.884531;SGB=90.0605;VDB=0.825199;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G1805|2446|LOC_Os11g40450|protein_coding|CODING|LOC_Os11g40450.1|15|1) FN1093-S.SNP.11:24124892 chr11:024124892 0 W/24124892-24124892 FN1093-S Single Base Substitution A-T INTRON HET SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN524-S.SNP.11:24125141 chr11:024125141 0 W/24125141-24125141 FN524-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g40450 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN-262.SNP.11:24127331 chr11:024127331 0 W/24127331-24127331 FN-262 Single Base Substitution G-A INTRON HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2680-S.SNP.11:24128686 chr11:024128686 0 W/24128686-24128686 FN2680-S SNP C -> G AC=1;AN=200;BQB=0.995357;DP=4630;DP4=2251,2119,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.79882e-07;MQSB=0.981572;RPB=0.433172;SGB=36.6644;VDB=0.794576;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cCa|R873P|2446|LOC_Os11g40450|protein_coding|CODING|LOC_Os11g40450.1|7|1) FN3710-S.SNP.11:24138931 chr11:024138931 0 W/24138931-24138931 FN3710-S SNP T -> C AC=1;AN=190;BQB=0.937104;DP=3090;DP4=1568,1422,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.22997e-08;MQSB=0.00796989;RPB=0.996401;SGB=67.3108;VDB=0.703512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N176D|1144|LOC_Os11g40460|protein_coding|CODING|LOC_Os11g40460.1|2|1) FN2553-S.SNP.11:24139602 chr11:024139602 0 W/24139602-24139602 FN2553-S SNP T -> A AC=1;AN=190;BQB=0.959259;DP=3879;DP4=1919,1785,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0121165;MQB=0.658489;MQSB=0.322335;RPB=0.978013;SGB=29.3637;VDB=0.505957;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.11:24152983 chr11:024152983 0 W/24152983-24152983 FN632-S Single Base Substitution G-A INTERGENIC HET SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN946-S.SNP.11:24159887 chr11:024159887 0 W/24159887-24159887 FN946-S Single Base Substitution C-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN3451-S.SNP.11:24173522 chr11:024173522 0 W/24173522-24173522 FN3451-S SNP A -> C AC=1;AN=184;BQB=0.945652;DP=2409;DP4=1164,1157,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.77428e-07;MQSB=0.947201;RPB=0.886806;SGB=39.699;VDB=0.0362545;EFF=INTRON(MODIFIER||||441|LOC_Os11g40510|protein_coding|CODING|LOC_Os11g40510.1|3|1),INTRON(MODIFIER||||403|LOC_Os11g40510|protein_coding|CODING|LOC_Os11g40510.2|3|1) FN2684-S.SNP.11:24176897 chr11:024176897 0 W/24176897-24176897 FN2684-S SNP A -> G AC=1;AN=200;BQB=0.548152;DP=4929;DP4=2348,2366,9,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55357e-13;MQSB=0.675694;RPB=0.966928;SGB=50.3263;VDB=0.843968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.11:24179421 chr11:024179421 0 W/24179421-24179421 FN2231-S SNP C -> T AC=1;AN=190;BQB=0.586564;DP=4807;DP4=2385,1983,17,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.38946e-10;MQSB=0.84918;RPB=0.339468;SGB=-38.5551;VDB=0.244637;EFF=INTERGENIC(MODIFIER||||||||||1) FN4107-S.SNP.11:24190429 chr11:024190429 0 W/24190429-24190429 FN4107-S SNP C -> T AC=2;AN=182;BQB=0.999381;DP=2962;DP4=1474,1359,9,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.94029e-10;MQSB=0.992753;RPB=0.987362;SGB=71.1765;VDB=0.769538;EFF=INTRON(MODIFIER||||658|LOC_Os11g40540|protein_coding|CODING|LOC_Os11g40540.1|6|1),INTRON(MODIFIER||||654|LOC_Os11g40540|protein_coding|CODING|LOC_Os11g40540.2|6|1) FN862-S.SNP.11:24196421 chr11:024196421 0 W/24196421-24196421 FN862-S Single Base Substitution T-C INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN-255.SNP.11:24198606 chr11:024198606 0 W/24198606-24198606 FN-255 Single Base Substitution A-G INTERGENIC HOMO SNo: 254, Mutant_ID: FN-255, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN3401-S.SNP.11:24202527 chr11:024202527 0 W/24202527-24202527 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.960397;DP=3152;DP4=1578,1506,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.76539e-06;MQSB=0.952583;RPB=0.92271;SGB=35.1773;VDB=0.628185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3538-S.SNP.11:24214864 chr11:024214864 0 W/24214864-24214864 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.931349;DP=3200;DP4=1385,1689,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.35561e-05;MQSB=0.980866;RPB=0.848076;SGB=30.8063;VDB=0.824003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2538-S.SNP.11:24217044 chr11:024217044 0 W/24217044-24217044 FN2538-S SNP A -> T AC=1;AN=188;BQB=0.19117;DP=4113;DP4=1846,1992,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21537e-10;MQSB=0.711094;RPB=0.903785;SGB=17.325;VDB=0.683515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.11:24230085 chr11:024230085 0 W/24230085-24230085 FN1056-S Single Base Substitution G-C INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN-113.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN-113 Single Base Substitution T-A INTERGENIC HET SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN-362.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN-362 Single Base Substitution T-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN1011-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN1011-S Single Base Substitution T-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1140-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN1140-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1396-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN1396-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1618-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN1618-S Single Base Substitution T-A INTERGENIC HET SNo: 1331, Mutant_ID: FN1618-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN2103-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN2103-S SNP T -> A AC=2;AN=168;BQB=0.699626;DP=4072;DP4=1926,2086,26,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.00835e-22;MQSB=0.981473;RPB=0.792529;SGB=-108.867;VDB=0.356075;EFF=INTERGENIC(MODIFIER||||||||||1) FN2253-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN2253-S SNP T -> A AC=2;AN=190;BQB=0.00264311;DP=4907;DP4=2205,2381,7,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.3539e-08;MQSB=0.84802;RPB=0.758595;SGB=7.21887;VDB=0.972511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN3395-S SNP T -> A AC=1;AN=184;BQB=0.932106;DP=2576;DP4=1158,1286,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31178e-08;MQSB=0.950489;RPB=0.451224;SGB=42.7914;VDB=0.333627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3807-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN3807-S SNP T -> A AC=2;AN=190;BQB=0.975952;DP=2517;DP4=1243,1189,9,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.89901e-13;MQSB=0.956307;RPB=0.909987;SGB=68.0854;VDB=0.966018;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN3852-S SNP T -> A AC=2;AN=158;BQB=0.825138;DP=2241;DP4=1064,1085,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.17978e-10;MQSB=0.942816;RPB=0.924915;SGB=82.0227;VDB=0.940103;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN391-S Single Base Substitution T-A INTERGENIC HOMO SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4032-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN4032-S SNP T -> A AC=2;AN=168;BQB=0.782322;DP=2386;DP4=1157,1111,20,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.23904e-16;MQSB=0.962906;RPB=0.989043;SGB=110.226;VDB=0.9238;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.11:24237317 chr11:024237317 0 W/24237317-24237317 FN735-S Single Base Substitution T-A INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN861-S.SNP.11:24245228 chr11:024245228 0 W/24245228-24245228 FN861-S Single Base Substitution A-G INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN924-S.SNP.11:24247251 chr11:024247251 0 W/24247251-24247251 FN924-S Single Base Substitution C-T INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN229-S.SNP.11:24256389 chr11:024256389 0 W/24256389-24256389 FN229-S Single Base Substitution T-C INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN978-S.SNP.11:24262431 chr11:024262431 0 W/24262431-24262431 FN978-S Single Base Substitution G-A INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1180-S.SNP.11:24265271 chr11:024265271 0 W/24265271-24265271 FN1180-S Single Base Substitution A-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN939-S.SNP.11:24270495 chr11:024270495 0 W/24270495-24270495 FN939-S Single Base Substitution C-T INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2222-S.SNP.11:24271250 chr11:024271250 0 W/24271250-24271250 FN2222-S SNP G -> A AC=1;AN=188;BQB=0.903309;DP=2532;DP4=1253,1013,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=3.34298e-06;MQSB=0.00299719;RPB=0.822706;SGB=28.9929;VDB=0.929782;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.11:24273337 chr11:024273337 0 W/24273337-24273337 FN939-S Single Base Substitution T-C INTERGENIC HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN3360-S.SNP.11:24276016 chr11:024276016 0 W/24276016-24276016 FN3360-S SNP C -> T AC=1;AN=184;BQB=0.995139;DP=3115;DP4=1265,1747,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21405e-06;MQSB=0.486964;RPB=0.557904;SGB=32.2261;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.11:24279075 chr11:024279075 0 W/24279075-24279075 FN521-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g40680 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN1307-S.SNP.11:24280083 chr11:024280083 0 W/24280083-24280083 FN1307-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g40680 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1424-S.SNP.11:24285165 chr11:024285165 0 W/24285165-24285165 FN1424-S Single Base Substitution A-T INTERGENIC HET SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN405-S.SNP.11:24288323 chr11:024288323 0 W/24288323-24288323 FN405-S Single Base Substitution C-T INTERGENIC HET SNo: 397, Mutant_ID: FN405-S, Generation: M2, Mutations: 56, Genes: 155, Seed availability: Yes. FN1716-S.SNP.11:24288890 chr11:024288890 0 W/24288890-24288890 FN1716-S SNP G -> C AC=1;AN=188;BQB=0.0460854;DP=3784;DP4=1704,2023,16,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25115e-07;MQSB=0.999942;RPB=0.476972;SGB=-98.724;VDB=0.824233;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.11:24294838 chr11:024294838 0 W/24294838-24294838 FN910-S Single Base Substitution T-A INTERGENIC HOMO SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN2749-S.SNP.11:24298717 chr11:024298717 0 W/24298717-24298717 FN2749-S SNP T -> A AC=1;AN=200;BQB=0.749096;DP=4847;DP4=2233,2470,5,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=0.00547348;MQSB=0.00401504;RPB=0.657665;SGB=-1.74624;VDB=0.809714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1485-S.SNP.11:24301488 chr11:024301488 0 W/24301488-24301488 FN1485-S Single Base Substitution C-G INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN2612-S.SNP.11:24304006 chr11:024304006 0 W/24304006-24304006 FN2612-S SNP T -> A AC=1;AN=198;BQB=0.721569;DP=3417;DP4=1789,1453,15,6;HOB=5.10152e-05;ICB=0.000102546;MQ=39;MQ0F=0;MQB=0.00126123;MQSB=0.00045159;RPB=0.690297;SGB=90.9049;VDB=0.180008;EFF=INTRON(MODIFIER||||343|LOC_Os11g40690|protein_coding|CODING|LOC_Os11g40690.1|4|1) FN559-S.SNP.11:24307400 chr11:024307400 0 W/24307400-24307400 FN559-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g40690 dehydrogenase, putative, expressed SNo: 552, Mutant_ID: FN559-S, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN244-S.SNP.11:24321010 chr11:024321010 0 W/24321010-24321010 FN244-S Single Base Substitution C-A INTERGENIC HOMO SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN1577-S.SNP.11:24322522 chr11:024322522 0 W/24322522-24322522 FN1577-S Single Base Substitution T-C INTERGENIC HET SNo: 1315, Mutant_ID: FN1577-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1682-S.SNP.11:24327170 chr11:024327170 0 W/24327170-24327170 FN1682-S SNP A -> T AC=2;AN=188;BQB=0.69519;DP=2495;DP4=1296,1140,27,16;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=5.2355e-09;MQSB=0.977721;RPB=0.943799;SGB=29.3264;VDB=0.5776;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.11:24328129 chr11:024328129 0 W/24328129-24328129 FN4011-S SNP T -> C AC=1;AN=168;BQB=0.992887;DP=2677;DP4=1347,1119,13,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.45253e-11;MQSB=0.951383;RPB=0.960302;SGB=34.3388;VDB=0.859148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2134-S.SNP.11:24330815 chr11:024330815 0 W/24330815-24330815 FN2134-S SNP C -> A AC=2;AN=168;BQB=0.750741;DP=3518;DP4=1548,1889,35,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.67853e-29;MQSB=0.88718;RPB=0.705121;SGB=-61.1339;VDB=0.793705;EFF=INTERGENIC(MODIFIER||||||||||1) FN1552-S.SNP.11:24333300 chr11:024333300 0 W/24333300-24333300 FN1552-S SNP T -> A AC=1;AN=188;BQB=0.111892;DP=2893;DP4=1757,1098,8,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.02001e-05;MQSB=0.976161;RPB=0.982332;SGB=-110.978;VDB=0.957894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2701-S.SNP.11:24337677 chr11:024337677 0 W/24337677-24337677 FN2701-S SNP G -> T AC=1;AN=200;BQB=0.995997;DP=3214;DP4=2393,647,7,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000114002;MQSB=2.45169e-05;RPB=0.935097;SGB=25.849;VDB=0.00972359;EFF=INTERGENIC(MODIFIER||||||||||1) W423-5-1.SNP.11:24338477 chr11:024338477 0 W/24338477-24338477 W423-5-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN872-S.SNP.11:24340222 chr11:024340222 0 W/24340222-24340222 FN872-S Single Base Substitution A-G INTERGENIC HOMO SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-38.SNP.11:24342201 chr11:024342201 0 W/24342201-24342201 FN-38 Single Base Substitution G-A INTERGENIC Homo SNo: 38, Mutant_ID: FN-38, Generation: M2, Mutations: 9, Genes: 5, Seed availability: Yes. FN3341-S.SNP.11:24342834 chr11:024342834 0 W/24342834-24342834 FN3341-S SNP C -> T AC=1;AN=184;BQB=0.631512;DP=2722;DP4=1358,1290,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000234172;MQSB=0.976272;RPB=0.999978;SGB=30.6558;VDB=0.868994;EFF=INTERGENIC(MODIFIER||||||||||1) FN-231.SNP.11:24402534 chr11:024402534 0 W/24402534-24402534 FN-231 Single Base Substitution C-T INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN-393.SNP.11:24404003 chr11:024404003 0 W/24404003-24404003 FN-393 Single Base Substitution G-C INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN929-S.SNP.11:24404914 chr11:024404914 0 W/24404914-24404914 FN929-S Single Base Substitution A-G INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN-394.SNP.11:24406486 chr11:024406486 0 W/24406486-24406486 FN-394 Single Base Substitution G-C INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3764-S.SNP.11:24412690 chr11:024412690 0 W/24412690-24412690 FN3764-S SNP T -> C AC=1;AN=190;BQB=0.457073;DP=2690;DP4=1328,1251,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.69534e-09;MQSB=0.932571;RPB=0.782905;SGB=53.8699;VDB=0.848684;EFF=INTERGENIC(MODIFIER||||||||||1) FN-165.SNP.11:24419663 chr11:024419663 0 W/24419663-24419663 FN-165 Single Base Substitution G-T INTERGENIC HOMO SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN3666-S.SNP.11:24419663 chr11:024419663 0 W/24419663-24419663 FN3666-S SNP G -> T AC=2;AN=190;BQB=0.694587;DP=2924;DP4=1577,1263,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.15042e-15;MQSB=0.995437;RPB=0.958847;SGB=75.1932;VDB=0.0829923;EFF=INTERGENIC(MODIFIER||||||||||1) FN3727-S.SNP.11:24424443 chr11:024424443 0 W/24424443-24424443 FN3727-S SNP C -> G AC=1;AN=190;BQB=0.852096;DP=2700;DP4=1107,1513,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0974074;MQB=0.993047;MQSB=0;RPB=0.702886;SGB=53.6492;VDB=0.830069;EFF=INTRON(MODIFIER||||736|LOC_Os11g40810|protein_coding|CODING|LOC_Os11g40810.1|1|1) FN2322.SNP.11:24425867 chr11:024425867 0 W/24425867-24425867 FN2322 SNP C -> T AC=1;AN=192;BQB=0.930905;DP=5469;DP4=2678,2411,16,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=7.31843e-10;MQSB=0.121484;RPB=0.998114;SGB=122.24;VDB=0.409059;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G195|1965|LOC_Os11g40820|protein_coding|CODING|LOC_Os11g40820.1|1|1) FN3474-S.SNP.11:24429893 chr11:024429893 0 W/24429893-24429893 FN3474-S SNP C -> T AC=1;AN=184;BQB=0.945749;DP=3740;DP4=1694,1974,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.0013369;MQB=8.03289e-07;MQSB=0.0181383;RPB=0.899624;SGB=93.9603;VDB=0.921158;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q1459*|1965|LOC_Os11g40820|protein_coding|CODING|LOC_Os11g40820.1|4|1) FN2655-S.SNP.11:24432294 chr11:024432294 0 W/24432294-24432294 FN2655-S SNP C -> T AC=1;AN=200;BQB=0.966073;DP=4892;DP4=2278,2359,13,14;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=2.80155e-14;MQSB=0.688211;RPB=0.0335095;SGB=87.1368;VDB=0.136166;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A972|1055|LOC_Os11g40830|protein_coding|CODING|LOC_Os11g40830.1|2|1) FN3740-S.SNP.11:24433905 chr11:024433905 0 W/24433905-24433905 FN3740-S SNP C -> T AC=1;AN=190;BQB=0.832623;DP=1771;DP4=743,948,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0012812;MQSB=0.977954;RPB=0.997754;SGB=35.4339;VDB=0.2421;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q435|1055|LOC_Os11g40830|protein_coding|CODING|LOC_Os11g40830.1|2|1) FN-336.SNP.11:24435275 chr11:024435275 0 W/24435275-24435275 FN-336 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g40830 retrotransposon protein, putative, unclassified, expressed SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2180-S.SNP.11:24442940 chr11:024442940 0 W/24442940-24442940 FN2180-S SNP T -> C AC=1;AN=190;BQB=0.75063;DP=5420;DP4=2492,2563,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0;MQB=0.000438182;MQSB=8.66181e-06;RPB=0.912172;SGB=46.7622;VDB=0.765708;EFF=INTRON(MODIFIER||||626|LOC_Os11g40860|protein_coding|CODING|LOC_Os11g40860.1|3|1) FN-219.SNP.11:24449194 chr11:024449194 0 W/24449194-24449194 FN-219 Single Base Substitution T-A INTERGENIC HOMO SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN2299.SNP.11:24564454 chr11:024564454 0 W/24564454-24564454 FN2299 SNP G -> T AC=1;AN=192;BQB=0.524587;DP=4831;DP4=2531,2015,7,8;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=7.67422e-08;MQSB=0.432325;RPB=0.739451;SGB=62.9035;VDB=0.316436;EFF=START_GAINED(LOW||||123|LOC_Os11g41034|protein_coding|CODING|LOC_Os11g41034.1|2|1),UTR_5_PRIME(MODIFIER||5401||123|LOC_Os11g41034|protein_coding|CODING|LOC_Os11g41034.1|2|1) FN3806-S.SNP.11:24567994 chr11:024567994 0 W/24567994-24567994 FN3806-S SNP T -> G AC=1;AN=190;BQB=0.855779;DP=2539;DP4=1257,1168,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.245915;MQSB=0.570122;RPB=0.510125;SGB=13.4442;VDB=0.434288;EFF=INTRON(MODIFIER||||123|LOC_Os11g41034|protein_coding|CODING|LOC_Os11g41034.1|2|1) FN-74.SNP.11:24579715 chr11:024579715 0 W/24579715-24579715 FN-74 Single Base Substitution C-T INTERGENIC HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN2142-S.SNP.11:24629914 chr11:024629914 0 W/24629914-24629914 FN2142-S SNP G -> T AC=1;AN=168;BQB=0.644623;DP=3837;DP4=1942,1863,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00473e-09;MQSB=0.0486574;RPB=0.293902;SGB=-87.7854;VDB=0.0684826;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A244S|613|LOC_Os11g41110|protein_coding|CODING|LOC_Os11g41110.1|2|1) FN3630-S.SNP.11:24633671 chr11:024633671 0 W/24633671-24633671 FN3630-S SNP A -> T AC=2;AN=190;BQB=0.986596;DP=3427;DP4=1625,1652,14,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.00513e-15;MQSB=0.995181;RPB=0.997034;SGB=121.957;VDB=0.228354;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.11:24640060 chr11:024640060 0 W/24640060-24640060 FN3422-S SNP A -> C AC=1;AN=184;BQB=0.538178;DP=2895;DP4=1248,1485,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27333e-05;MQSB=0.365913;RPB=0.762889;SGB=15.7097;VDB=0.546126;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.11:24640939 chr11:024640939 0 W/24640939-24640939 FN705-S Single Base Substitution G-A INTERGENIC HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN560-S.SNP.11:24641994 chr11:024641994 0 W/24641994-24641994 FN560-S Single Base Substitution A-C INTERGENIC HET SNo: 553, Mutant_ID: FN560-S, Generation: M2, Mutations: 47, Genes: 16, Seed availability: Yes. FN3950-S.SNP.11:24643436 chr11:024643436 0 W/24643436-24643436 FN3950-S SNP A -> C AC=2;AN=168;BQB=0.824986;DP=2562;DP4=1179,1260,21,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.70791e-22;MQSB=0.983482;RPB=0.560657;SGB=130.811;VDB=0.349173;EFF=INTRON(MODIFIER||||267|LOC_Os11g41130|protein_coding|CODING|LOC_Os11g41130.2|3|1) FN825-S.SNP.11:24643835 chr11:024643835 0 W/24643835-24643835 FN825-S Single Base Substitution G-A INTRON HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN449-S.SNP.11:24646165 chr11:024646165 0 W/24646165-24646165 FN449-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g41130 vacuolar protein sorting-associated protein 26, putative, expressed SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1163-S.SNP.11:24647912 chr11:024647912 0 W/24647912-24647912 FN1163-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN3983-S.SNP.11:24648299 chr11:024648299 0 W/24648299-24648299 FN3983-S SNP C -> T AC=2;AN=168;BQB=0.77703;DP=2767;DP4=951,1690,13,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000361402;MQB=1.73672e-10;MQSB=0.791492;RPB=0.488859;SGB=46.4929;VDB=0.185913;EFF=INTRON(MODIFIER||||220|LOC_Os11g41140|protein_coding|CODING|LOC_Os11g41140.1|1|1) FN3830-S.SNP.11:24648923 chr11:024648923 0 W/24648923-24648923 FN3830-S SNP A -> G AC=2;AN=190;BQB=0.975625;DP=2384;DP4=1019,1268,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.45158e-14;MQSB=0.969334;RPB=0.995966;SGB=78.7471;VDB=0.876028;EFF=INTRON(MODIFIER||||220|LOC_Os11g41140|protein_coding|CODING|LOC_Os11g41140.1|2|1) FN729-S.SNP.11:24654014 chr11:024654014 0 W/24654014-24654014 FN729-S Single Base Substitution T-C INTERGENIC HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN2658-S.SNP.11:24660491 chr11:024660491 0 W/24660491-24660491 FN2658-S SNP G -> A AC=1;AN=200;BQB=0.959821;DP=5457;DP4=2253,2856,14,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39705e-16;MQSB=0.98903;RPB=0.94333;SGB=68.5625;VDB=0.309568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3788-S.SNP.11:24661341 chr11:024661341 0 W/24661341-24661341 FN3788-S SNP G -> A AC=2;AN=190;BQB=0.784081;DP=2250;DP4=1143,1010,10,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.71509e-15;MQSB=0.928687;RPB=0.0985277;SGB=103.742;VDB=0.134382;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.11:24665085 chr11:024665085 0 W/24665085-24665085 FN320-S Single Base Substitution G-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN2080-S.SNP.11:24669461 chr11:024669461 0 W/24669461-24669461 FN2080-S SNP A -> G AC=1;AN=168;BQB=0.230698;DP=3343;DP4=1615,1697,11,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.64039e-10;MQSB=0.923324;RPB=0.556929;SGB=14.2064;VDB=0.287107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.11:24676998 chr11:024676998 0 W/24676998-24676998 FN2676-S SNP G -> A AC=1;AN=200;BQB=0.952287;DP=4889;DP4=2337,2360,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13718e-10;MQSB=0.88833;RPB=0.844001;SGB=68.0801;VDB=0.906282;EFF=INTERGENIC(MODIFIER||||||||||1) FN-54.SNP.11:24678872 chr11:024678872 0 W/24678872-24678872 FN-54 Single Base Substitution A-T INTERGENIC HET SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN1477-S.SNP.11:24681104 chr11:024681104 0 W/24681104-24681104 FN1477-S Single Base Substitution C-T INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2661-S.SNP.11:24686495 chr11:024686495 0 W/24686495-24686495 FN2661-S SNP C -> A AC=1;AN=200;BQB=3.85889e-09;DP=4258;DP4=2124,1889,12,10;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0103335;MQB=0.443422;MQSB=0;RPB=0.991748;SGB=42.5108;VDB=0.0716413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P123T|800|LOC_Os11g41180|protein_coding|CODING|LOC_Os11g41180.1|3|1) FN2661-S.SNP.11:24686496 chr11:024686496 0 W/24686496-24686496 FN2661-S SNP C -> A AC=1;AN=200;BQB=5.04428e-09;DP=4261;DP4=2132,1916,12,11;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.00727529;MQB=0.285318;MQSB=0;RPB=0.894964;SGB=17.5158;VDB=0.102925;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P123Q|800|LOC_Os11g41180|protein_coding|CODING|LOC_Os11g41180.1|3|1) FN2661-S.SNP.11:24686508 chr11:024686508 0 W/24686508-24686508 FN2661-S SNP G -> A AC=1;AN=200;BQB=1.7376e-14;DP=4210;DP4=2068,1930,13,10;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.0456057;MQB=0.819953;MQSB=0;RPB=0.811372;SGB=72.7161;VDB=0.122797;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R127K|800|LOC_Os11g41180|protein_coding|CODING|LOC_Os11g41180.1|3|1) FN1517-S.SNP.11:24708058 chr11:024708058 0 W/24708058-24708058 FN1517-S Single Base Substitution C-G INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN848-S.SNP.11:24711510 chr11:024711510 0 W/24711510-24711510 FN848-S Single Base Substitution G-A INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. W464-2-1.SNP.11:24713774 chr11:024713774 0 W/24713774-24713774 W464-2-1 Single Base Substitution A-G INTRON HOMO SNo: 1417, Mutant_ID: W464-2-1, Generation: M2, Mutations: 58, Genes: 34, Seed availability: Yes. FN884-S.SNP.11:24716430 chr11:024716430 0 W/24716430-24716430 FN884-S Single Base Substitution C-T STOP_GAINED HET LOC_Os11g41210 disease resistance protein RPM1, putative, expressed SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN857-S.SNP.11:24718007 chr11:024718007 0 W/24718007-24718007 FN857-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN-240.SNP.11:24724690 chr11:024724690 0 W/24724690-24724690 FN-240 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g41230 ATBPM6, putative, expressed SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2155-S.SNP.11:24725039 chr11:024725039 0 W/24725039-24725039 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.00434726;DP=3361;DP4=1925,1403,11,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.18309e-05;MQSB=0.274781;RPB=0.962551;SGB=-16.665;VDB=0.95154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D186N|188|LOC_Os11g41230|protein_coding|CODING|LOC_Os11g41230.1|1|1) FN854-S.SNP.11:24732329 chr11:024732329 0 W/24732329-24732329 FN854-S Single Base Substitution A-C INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN-225.SNP.11:24733614 chr11:024733614 0 W/24733614-24733614 FN-225 Single Base Substitution C-T INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN4039-S.SNP.11:24736365 chr11:024736365 0 W/24736365-24736365 FN4039-S SNP G -> T AC=1;AN=168;BQB=0.859446;DP=2456;DP4=1028,1343,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29393e-08;MQSB=0.794807;RPB=0.999309;SGB=56.6036;VDB=0.802096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M320I|654|LOC_Os11g41260|protein_coding|CODING|LOC_Os11g41260.1|2|1) FN734-S.SNP.11:24736365 chr11:024736365 0 W/24736365-24736365 FN734-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g41260 snRNP protein, putative, expressed SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN3482-S.SNP.11:24742101 chr11:024742101 0 W/24742101-24742101 FN3482-S SNP A -> G AC=1;AN=184;BQB=0.973502;DP=3314;DP4=1612,1567,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.28808e-12;MQSB=0.842819;RPB=0.838049;SGB=89.4385;VDB=0.780315;EFF=INTERGENIC(MODIFIER||||||||||1) FN-243.SNP.11:24744970 chr11:024744970 0 W/24744970-24744970 FN-243 Single Base Substitution C-A INTRON HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN360-S.SNP.11:24746867 chr11:024746867 0 W/24746867-24746867 FN360-S Single Base Substitution T-G INTRON HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1062-S.SNP.11:24752943 chr11:024752943 0 W/24752943-24752943 FN1062-S Single Base Substitution G-A INTERGENIC HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3833-S.SNP.11:24756776 chr11:024756776 0 W/24756776-24756776 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.982258;DP=3147;DP4=1548,1489,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.55605e-09;MQSB=0.983578;RPB=0.92464;SGB=76.4186;VDB=0.662306;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P204L|358|LOC_Os11g41300|protein_coding|CODING|LOC_Os11g41300.1|1|1) W466-5-1.SNP.11:24758019 chr11:024758019 0 W/24758019-24758019 W466-5-1 Single Base Substitution T-G INTERGENIC HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1727-S.SNP.11:24758033 chr11:024758033 0 W/24758033-24758033 FN1727-S SNP G -> A AC=2;AN=188;BQB=0.653874;DP=3832;DP4=1832,1925,28,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.42676e-28;MQSB=0.937432;RPB=0.965158;SGB=-111.43;VDB=0.35483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.11:24763424 chr11:024763424 0 W/24763424-24763424 FN1108-S Single Base Substitution G-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN536-S.SNP.11:24764527 chr11:024764527 0 W/24764527-24764527 FN536-S Single Base Substitution G-A INTERGENIC HET SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN-118.SNP.11:24768055 chr11:024768055 0 W/24768055-24768055 FN-118 Single Base Substitution T-G INTERGENIC HET SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN2147-S.SNP.11:24772238 chr11:024772238 0 W/24772238-24772238 FN2147-S SNP A -> T AC=1;AN=168;BQB=0.29495;DP=3655;DP4=1651,1955,13,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.41011e-12;MQSB=0.988383;RPB=0.851824;SGB=-45.1967;VDB=0.767392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2660-S.SNP.11:24774111 chr11:024774111 0 W/24774111-24774111 FN2660-S SNP C -> T AC=1;AN=200;BQB=0.794879;DP=4458;DP4=2263,1971,8,5;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0130103;MQB=0.00220679;MQSB=5.71897e-05;RPB=0.953146;SGB=54.2646;VDB=0.994111;EFF=INTERGENIC(MODIFIER||||||||||1) FN4183-S.SNP.11:24774710 chr11:024774710 0 W/24774710-24774710 FN4183-S SNP G -> A AC=1;AN=170;BQB=0.537893;DP=2643;DP4=1358,1220,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0151343;MQB=0.0713915;MQSB=0.415986;RPB=0.909343;SGB=19.8839;VDB=0.255247;EFF=INTERGENIC(MODIFIER||||||||||1) 702-1.SNP.11:24783602 chr11:024783602 0 W/24783602-24783602 702-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1443, Mutant_ID: 702-1, Generation: M2, Mutations: 29, Genes: 12, Seed availability: Yes. 702-7.SNP.11:24783602 chr11:024783602 0 W/24783602-24783602 702-7 Single Base Substitution C-A INTERGENIC Homo SNo: 1448, Mutant_ID: 702-7, Generation: M2, Mutations: 31, Genes: 27, Seed availability: Yes. 702-8.SNP.11:24783602 chr11:024783602 0 W/24783602-24783602 702-8 Single Base Substitution C-A INTERGENIC Homo SNo: 1449, Mutant_ID: 702-8, Generation: M2, Mutations: 12, Genes: 9, Seed availability: Yes. FN941-S.SNP.11:24790388 chr11:024790388 0 W/24790388-24790388 FN941-S Single Base Substitution G-A INTERGENIC HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN-90.SNP.11:24794160 chr11:024794160 0 W/24794160-24794160 FN-90 Single Base Substitution C-A INTERGENIC HET SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN_N1-213-1.SNP.11:24796425 chr11:024796425 0 W/24796425-24796425 FN_N1-213-1 Single Base Substitution C-T HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3687-S.SNP.11:24800518 chr11:024800518 0 W/24800518-24800518 FN3687-S SNP A -> G AC=2;AN=190;BQB=0.975687;DP=2814;DP4=1303,1274,13,11;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.07513e-12;MQSB=0.832746;RPB=0.0790059;SGB=46.6446;VDB=0.586571;EFF=INTERGENIC(MODIFIER||||||||||1) FN4120-S.SNP.11:24802903 chr11:024802903 0 W/24802903-24802903 FN4120-S SNP A -> G AC=2;AN=182;BQB=0.429458;DP=2780;DP4=1357,1308,11,20;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.77539e-11;MQSB=0.977555;RPB=0.992689;SGB=98.8232;VDB=0.781727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.11:24806233 chr11:024806233 0 W/24806233-24806233 FN3629-S SNP A -> T AC=1;AN=190;BQB=0.957699;DP=3166;DP4=1658,1417,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000652759;MQSB=0.999494;RPB=0.782446;SGB=49.0954;VDB=0.897589;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.11:24807137 chr11:024807137 0 W/24807137-24807137 FN1689-S SNP G -> A AC=2;AN=188;BQB=0.877601;DP=2781;DP4=1295,1449,12,15;HOB=0.0210502;ICB=0.494738;MQ=44;MQ0F=0;MQB=1.5612e-06;MQSB=0.67378;RPB=0.540003;SGB=85.5904;VDB=0.907755;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.11:24810994 chr11:024810994 0 W/24810994-24810994 W246-5-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN1484-S.SNP.11:24811165 chr11:024811165 0 W/24811165-24811165 FN1484-S Single Base Substitution A-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN4069-S.SNP.11:24812285 chr11:024812285 0 W/24812285-24812285 FN4069-S SNP A -> G AC=1;AN=182;BQB=0.991429;DP=2755;DP4=1315,1305,19,18;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0;MQB=8.97438e-11;MQSB=0.0248767;RPB=0.754517;SGB=119.888;VDB=0.282935;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.11:24814762 chr11:024814762 0 W/24814762-24814762 FN508-S Single Base Substitution T-C INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN-353.SNP.11:24815724 chr11:024815724 0 W/24815724-24815724 FN-353 Single Base Substitution T-C INTERGENIC HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2706-S.SNP.11:24816707 chr11:024816707 0 W/24816707-24816707 FN2706-S SNP G -> A AC=1;AN=200;BQB=0.278927;DP=4043;DP4=1979,1772,15,4;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0234974;MQB=0.988778;MQSB=3.77661e-17;RPB=0.303864;SGB=58.2954;VDB=0.684758;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.11:24826885 chr11:024826885 0 W/24826885-24826885 FN2784-S SNP A -> T AC=1;AN=198;BQB=0.66874;DP=4303;DP4=1952,2041,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.83562e-11;MQSB=0.959227;RPB=0.777923;SGB=104.69;VDB=0.465066;EFF=UTR_5_PRIME(MODIFIER||282||150|LOC_Os11g41365|protein_coding|CODING|LOC_Os11g41365.1|1|1) FN1646-S.SNP.11:24841923 chr11:024841923 0 W/24841923-24841923 FN1646-S Single Base Substitution C-G INTRON HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN1686-S.SNP.11:24846925 chr11:024846925 0 W/24846925-24846925 FN1686-S SNP T -> A AC=1;AN=188;BQB=0.00730266;DP=1725;DP4=1081,581,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.0861043;MQSB=0.484232;RPB=0.972406;SGB=-35.9944;VDB=0.194422;EFF=INTERGENIC(MODIFIER||||||||||1) W466-5-1.SNP.11:24850558 chr11:024850558 0 W/24850558-24850558 W466-5-1 Single Base Substitution C-T INTRON HET SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN3786-S.SNP.11:24851554 chr11:024851554 0 W/24851554-24851554 FN3786-S SNP G -> C AC=1;AN=190;BQB=0.844932;DP=2547;DP4=1103,1353,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.76002e-09;MQSB=0.880874;RPB=0.504164;SGB=26.2136;VDB=0.552258;EFF=INTRON(MODIFIER||||132|LOC_Os11g41410|protein_coding|CODING|LOC_Os11g41410.1|2|1) W554-1-1.SNP.11:24855463 chr11:024855463 0 W/24855463-24855463 W554-1-1 Single Base Substitution G-A INTRON HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2702-S.SNP.11:24856870 chr11:024856870 0 W/24856870-24856870 FN2702-S SNP T -> A AC=2;AN=200;BQB=0.988593;DP=4746;DP4=2017,2428,7,7;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.8219e-09;MQSB=0.98994;RPB=0.876204;SGB=58.8698;VDB=0.793023;EFF=INTERGENIC(MODIFIER||||||||||1) FN4090-S.SNP.11:24859814 chr11:024859814 0 W/24859814-24859814 FN4090-S SNP C -> T AC=1;AN=182;BQB=0.691546;DP=2913;DP4=1335,1479,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.54156e-11;MQSB=0.99254;RPB=0.984259;SGB=30.6767;VDB=0.419171;EFF=INTERGENIC(MODIFIER||||||||||1) FN3398-S.SNP.11:24867110 chr11:024867110 0 W/24867110-24867110 FN3398-S SNP C -> A AC=1;AN=184;BQB=0.964571;DP=3232;DP4=1438,1691,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00216584;MQB=1.21108e-05;MQSB=0.961226;RPB=0.932205;SGB=35.1773;VDB=0.26558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.11:24869668 chr11:024869668 0 W/24869668-24869668 FN2618-S SNP G -> A AC=1;AN=198;BQB=0.642705;DP=3777;DP4=1932,1635,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.89293e-09;MQSB=0.960691;RPB=0.95107;SGB=72.5051;VDB=0.441417;EFF=INTRON(MODIFIER||||125|LOC_Os11g41450|protein_coding|CODING|LOC_Os11g41450.1|1|1) FN1064-S.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN1064-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 952, Mutant_ID: FN1064-S, Generation: M2, Mutations: 62, Genes: 6, Seed availability: Yes. FN1538-S.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN1538-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2130-S.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN2130-S SNP G -> A AC=2;AN=168;BQB=0.999118;DP=1810;DP4=778,986,8,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.0068e-07;MQSB=0.924221;RPB=0.324302;SGB=4.1907;VDB=0.641471;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A85|500|LOC_Os11g41460|protein_coding|CODING|LOC_Os11g41460.1|3|1) FN3324-S.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN3324-S SNP G -> A AC=1;AN=184;BQB=0.935417;DP=3561;DP4=1897,1575,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.24934e-07;MQSB=0.997166;RPB=0.810802;SGB=39.699;VDB=0.206708;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A85|500|LOC_Os11g41460|protein_coding|CODING|LOC_Os11g41460.1|3|1) FN4163-S.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN4163-S SNP G -> A AC=1;AN=170;BQB=0.997891;DP=2486;DP4=1321,1108,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.35648e-09;MQSB=0.999616;RPB=0.986801;SGB=38.3207;VDB=0.56692;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A85|500|LOC_Os11g41460|protein_coding|CODING|LOC_Os11g41460.1|3|1) FN_809-6-1.SNP.11:24871543 chr11:024871543 0 W/24871543-24871543 FN_809-6-1 Single Base Substitution G-A HET SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN3695-S.SNP.11:24874215 chr11:024874215 0 W/24874215-24874215 FN3695-S SNP G -> A AC=1;AN=190;BQB=0.999205;DP=3179;DP4=1446,1651,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00251651;MQB=5.97584e-09;MQSB=0.66919;RPB=0.853217;SGB=67.3108;VDB=0.177717;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S659L|731|LOC_Os11g41470|protein_coding|CODING|LOC_Os11g41470.1|5|1) FN2440.SNP.11:24877559 chr11:024877559 0 W/24877559-24877559 FN2440 SNP T -> C AC=2;AN=200;BQB=0.0995746;DP=4403;DP4=2116,1967,28,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.52327e-23;MQSB=0.928372;RPB=0.645997;SGB=177.266;VDB=0.581608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3942-S.SNP.11:24879159 chr11:024879159 0 W/24879159-24879159 FN3942-S SNP G -> A AC=1;AN=168;BQB=0.490642;DP=2635;DP4=1313,1227,12,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.15548e-08;MQSB=0.998646;RPB=0.957931;SGB=48.4712;VDB=0.447724;EFF=INTERGENIC(MODIFIER||||||||||1) FN2634-S.SNP.11:24880397 chr11:024880397 0 W/24880397-24880397 FN2634-S SNP C -> A AC=1;AN=200;BQB=0.757162;DP=4792;DP4=2322,2194,13,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.90528e-14;MQSB=0.994476;RPB=0.465587;SGB=15.9106;VDB=0.260503;EFF=INTRON(MODIFIER||||1162|LOC_Os11g41480|protein_coding|CODING|LOC_Os11g41480.1|1|1) FN3516-S.SNP.11:24880509 chr11:024880509 0 W/24880509-24880509 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.968574;DP=2664;DP4=1398,1203,10,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.78849e-15;MQSB=0.953936;RPB=0.975278;SGB=74.9605;VDB=0.217506;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q123|1162|LOC_Os11g41480|protein_coding|CODING|LOC_Os11g41480.1|2|1) FN2634-S.SNP.11:24881036 chr11:024881036 0 W/24881036-24881036 FN2634-S SNP G -> T AC=1;AN=200;BQB=0.984749;DP=4885;DP4=2306,2350,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12555e-14;MQSB=0.88819;RPB=0.114968;SGB=109.527;VDB=0.112269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L264F|1162|LOC_Os11g41480|protein_coding|CODING|LOC_Os11g41480.1|3|1) FN947-S.SNP.11:24882670 chr11:024882670 0 W/24882670-24882670 FN947-S Single Base Substitution C-A INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN413-S.SNP.11:24886444 chr11:024886444 0 W/24886444-24886444 FN413-S Single Base Substitution T-A INTERGENIC HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN413-S.SNP.11:24886451 chr11:024886451 0 W/24886451-24886451 FN413-S Single Base Substitution C-A INTERGENIC HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3889-S.SNP.11:24892805 chr11:024892805 0 W/24892805-24892805 FN3889-S SNP A -> T AC=1;AN=158;BQB=0.999888;DP=2450;DP4=1184,1156,7,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.000408163;MQB=5.3128e-09;MQSB=0.768014;RPB=0.70052;SGB=44.1818;VDB=0.729578;EFF=STOP_LOST(HIGH|MISSENSE|Taa/Aaa|*157K|156|LOC_Os11g41500|protein_coding|CODING|LOC_Os11g41500.1|2|1) FN789-S.SNP.11:24893690 chr11:024893690 0 W/24893690-24893690 FN789-S Single Base Substitution T-C INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN-179.SNP.11:24895142 chr11:024895142 0 W/24895142-24895142 FN-179 Single Base Substitution C-A INTERGENIC HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN1045-S.SNP.11:24895229 chr11:024895229 0 W/24895229-24895229 FN1045-S Single Base Substitution G-A INTERGENIC HOMO SNo: 939, Mutant_ID: FN1045-S, Generation: M2, Mutations: 47, Genes: 149, Seed availability: Yes. FN1614-S.SNP.11:24895442 chr11:024895442 0 W/24895442-24895442 FN1614-S Single Base Substitution T-C INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2307.SNP.11:24896018 chr11:024896018 0 W/24896018-24896018 FN2307 SNP C -> G AC=1;AN=192;BQB=0.988574;DP=4655;DP4=2168,2165,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.81635e-12;MQSB=0.969107;RPB=0.978593;SGB=49.4287;VDB=0.282337;EFF=INTERGENIC(MODIFIER||||||||||1) FN891-S.SNP.11:24896147 chr11:024896147 0 W/24896147-24896147 FN891-S Single Base Substitution T-C INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN-197.SNP.11:24903267 chr11:024903267 0 W/24903267-24903267 FN-197 Single Base Substitution C-T INTERGENIC HET SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-70.SNP.11:24908329 chr11:024908329 0 W/24908329-24908329 FN-70 Single Base Substitution G-A INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1745-S.SNP.11:24909768 chr11:024909768 0 W/24909768-24909768 FN1745-S SNP T -> C AC=2;AN=188;BQB=0.92918;DP=4146;DP4=1909,2179,22,27;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.29346e-26;MQSB=0.591341;RPB=1;SGB=56.4669;VDB=0.864349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.11:24910187 chr11:024910187 0 W/24910187-24910187 FN2730-S SNP C -> T AC=1;AN=200;BQB=0.99147;DP=4888;DP4=2273,2414,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.08207e-08;MQSB=0.991768;RPB=0.912562;SGB=36.6644;VDB=0.940627;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.11:24910820 chr11:024910820 0 W/24910820-24910820 FN1541-S Single Base Substitution T-A INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN920-S.SNP.11:24923574 chr11:024923574 0 W/24923574-24923574 FN920-S Single Base Substitution C-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN3326-S.SNP.11:24926813 chr11:024926813 0 W/24926813-24926813 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.937063;DP=1916;DP4=569,1293,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000204051;MQSB=0.946615;RPB=0.948213;SGB=18.1394;VDB=0.770293;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.11:24927066 chr11:024927066 0 W/24927066-24927066 FN4344-S SNP G -> T AC=1;AN=170;BQB=0.925573;DP=1728;DP4=319,1346,4,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.49781e-10;MQSB=0.835853;RPB=0.658151;SGB=65.6427;VDB=0.429885;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.11:24928136 chr11:024928136 0 W/24928136-24928136 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.785841;DP=2757;DP4=1452,1196,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.68275e-10;MQSB=0.79086;RPB=0.339292;SGB=33.3622;VDB=0.874434;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.11:24928137 chr11:024928137 0 W/24928137-24928137 FN3373-S SNP A -> T AC=1;AN=184;BQB=0.428291;DP=2751;DP4=1476,1161,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36094e-10;MQSB=0.932579;RPB=0.613878;SGB=53.3568;VDB=0.673997;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.11:24932309 chr11:024932309 0 W/24932309-24932309 FN1156-XA21 Single Base Substitution T-G INTERGENIC Homo SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN597-S.SNP.11:24939623 chr11:024939623 0 W/24939623-24939623 FN597-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g41570 OsFBX428 - F-box domain containing protein, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2080-S.SNP.11:24942324 chr11:024942324 0 W/24942324-24942324 FN2080-S SNP C -> A AC=1;AN=168;BQB=0.965677;DP=1502;DP4=746,712,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00665779;MQB=0.000101089;MQSB=0.695996;RPB=0.47902;SGB=52.1728;VDB=0.169243;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G157W|421|LOC_Os11g41580|protein_coding|CODING|LOC_Os11g41580.1|1|1) FN2183-S.SNP.11:24946161 chr11:024946161 0 W/24946161-24946161 FN2183-S SNP C -> T AC=2;AN=190;BQB=0.376339;DP=4513;DP4=2124,2098,31,29;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000221582;MQB=2.55764e-17;MQSB=0.00230678;RPB=0.638658;SGB=267.681;VDB=0.974414;EFF=INTERGENIC(MODIFIER||||||||||1) FN3666-S.SNP.11:24956093 chr11:024956093 0 W/24956093-24956093 FN3666-S SNP G -> A AC=1;AN=190;BQB=0.778277;DP=955;DP4=433,472,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0198953;MQB=0.11608;MQSB=0.0962062;RPB=0.282242;SGB=35.4339;VDB=0.000304667;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.11:24960385 chr11:024960385 0 W/24960385-24960385 FN798-S Single Base Substitution G-A INTERGENIC HET SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-196.SNP.11:24963387 chr11:024963387 0 W/24963387-24963387 FN-196 Single Base Substitution T-C INTERGENIC HOMO SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN799-S.SNP.11:24963559 chr11:024963559 0 W/24963559-24963559 FN799-S Single Base Substitution A-T INTERGENIC HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN3568-S.SNP.11:24965488 chr11:024965488 0 W/24965488-24965488 FN3568-S SNP A -> G AC=2;AN=188;BQB=0.994202;DP=3246;DP4=1710,1436,16,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000616143;MQB=1.83907e-10;MQSB=0.885443;RPB=0.47086;SGB=98.9552;VDB=0.44243;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.11:24974513 chr11:024974513 0 W/24974513-24974513 FN1724-S SNP C -> T AC=1;AN=188;BQB=0.00360501;DP=3820;DP4=1648,2135,9,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.09885e-07;MQSB=0.979868;RPB=0.994612;SGB=-41.0182;VDB=0.950595;EFF=INTRON(MODIFIER||||56|LOC_Os11g41610|protein_coding|CODING|LOC_Os11g41610.1|1|1) FN3601-S.SNP.11:24974887 chr11:024974887 0 W/24974887-24974887 FN3601-S SNP C -> T AC=1;AN=190;BQB=0.811759;DP=3307;DP4=1505,1655,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.96897e-09;MQSB=0.998816;RPB=0.987202;SGB=62.7569;VDB=0.79231;EFF=INTRON(MODIFIER||||56|LOC_Os11g41610|protein_coding|CODING|LOC_Os11g41610.1|2|1) FN3386-S.SNP.11:24977005 chr11:024977005 0 W/24977005-24977005 FN3386-S SNP C -> T AC=1;AN=184;BQB=0.629646;DP=2597;DP4=1309,1210,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.50198e-05;MQSB=0.989614;RPB=0.636154;SGB=21.6609;VDB=0.218349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A236V|735|LOC_Os11g41620|protein_coding|CODING|LOC_Os11g41620.1|2|1) FN3758-S.SNP.11:24977834 chr11:024977834 0 W/24977834-24977834 FN3758-S SNP A -> T AC=1;AN=190;BQB=0.588974;DP=2588;DP4=1279,1203,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000256735;MQSB=0.954399;RPB=0.845432;SGB=30.8803;VDB=0.575705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E498V|735|LOC_Os11g41620|protein_coding|CODING|LOC_Os11g41620.1|3|1) FN3468-S.SNP.11:24979554 chr11:024979554 0 W/24979554-24979554 FN3468-S SNP A -> G AC=2;AN=184;BQB=0.116383;DP=1913;DP4=850,912,11,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.51732e-06;MQSB=0.442009;RPB=0.995803;SGB=-13.6704;VDB=0.666275;EFF=INTERGENIC(MODIFIER||||||||||1) FN1757-S.SNP.11:24987824 chr11:024987824 0 W/24987824-24987824 FN1757-S SNP A -> G AC=2;AN=188;BQB=0.97734;DP=3627;DP4=1834,1739,18,25;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.14291e-21;MQSB=0.984944;RPB=0.144182;SGB=-47.8688;VDB=0.72708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3889-S.SNP.11:24988027 chr11:024988027 0 W/24988027-24988027 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.885799;DP=2027;DP4=1038,916,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.08831e-05;MQSB=0.978864;RPB=0.875463;SGB=20.5959;VDB=0.373295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.11:24994204 chr11:024994204 0 W/24994204-24994204 FN1200-S Single Base Substitution A-G INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3398-S.SNP.11:24995436 chr11:024995436 0 W/24995436-24995436 FN3398-S SNP A -> G AC=1;AN=184;BQB=0.970073;DP=2489;DP4=1165,1233,8,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.07513e-06;MQSB=0.886085;RPB=0.823727;SGB=35.1773;VDB=0.615174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.11:24998811 chr11:024998811 0 W/24998811-24998811 FN1689-S SNP C -> T AC=2;AN=188;BQB=0.0556937;DP=2260;DP4=1048,1168,11,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.87181e-05;MQSB=0.999888;RPB=0.968059;SGB=31.1628;VDB=0.957751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2264-S.SNP.11:25005325 chr11:025005325 0 W/25005325-25005325 FN2264-S SNP C -> T AC=1;AN=190;BQB=0.949643;DP=5117;DP4=2325,2444,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.43142e-08;MQSB=0.932786;RPB=0.180544;SGB=39.6545;VDB=0.867348;EFF=UTR_3_PRIME(MODIFIER||1585||195|LOC_Os11g41670|protein_coding|CODING|LOC_Os11g41670.1|3|1) FN920-S.SNP.11:25005680 chr11:025005680 0 W/25005680-25005680 FN920-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN846-S.SNP.11:25011806 chr11:025011806 0 W/25011806-25011806 FN846-S Single Base Substitution C-A INTERGENIC HOMO SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN752-S.SNP.11:25014264 chr11:025014264 0 W/25014264-25014264 FN752-S Single Base Substitution C-T INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2660-S.SNP.11:25028374 chr11:025028374 0 W/25028374-25028374 FN2660-S SNP G -> T AC=1;AN=200;BQB=0.849707;DP=4658;DP4=2022,2366,3,8;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00493774;MQB=0.00111367;MQSB=0.00106994;RPB=0.639;SGB=45.0543;VDB=0.317696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.11:25032988 chr11:025032988 0 W/25032988-25032988 FN1015-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g41690 retrotransposon protein, putative, unclassified, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1029-S.SNP.11:25035356 chr11:025035356 0 W/25035356-25035356 FN1029-S Single Base Substitution G-A INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN4049-S.SNP.11:25038504 chr11:025038504 0 W/25038504-25038504 FN4049-S SNP T -> A AC=1;AN=168;BQB=0.996034;DP=2519;DP4=1221,1199,5,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.80715e-09;MQSB=0.147672;RPB=0.564384;SGB=2.75988;VDB=0.123351;EFF=INTERGENIC(MODIFIER||||||||||1) FN-3.SNP.11:25041789 chr11:025041789 0 W/25041789-25041789 FN-3 Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 3, Mutant_ID: FN-3, Generation: M2, Mutations: 22, Genes: 29, Seed availability: Yes. FN1505-S.SNP.11:25042590 chr11:025042590 0 W/25042590-25042590 FN1505-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os11g41710 cytochrome P450, putative, expressed SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2412.SNP.11:25042746 chr11:025042746 0 W/25042746-25042746 FN2412 SNP G -> A AC=1;AN=200;BQB=0.973877;DP=4703;DP4=2195,2165,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.11167e-08;MQSB=0.998395;RPB=0.807604;SGB=7.88476;VDB=0.292974;EFF=UTR_3_PRIME(MODIFIER||37||512|LOC_Os11g41710|protein_coding|CODING|LOC_Os11g41710.1|3|1) FN1292-S.SNP.11:25057786 chr11:025057786 0 W/25057786-25057786 FN1292-S Single Base Substitution A-T INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN3679-S.SNP.11:25058816 chr11:025058816 0 W/25058816-25058816 FN3679-S SNP G -> A AC=1;AN=190;BQB=0.965007;DP=4014;DP4=2080,1797,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.350772;MQB=0.284815;MQSB=0;RPB=0.980873;SGB=53.6492;VDB=0.664012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H874Y|1086|LOC_Os11g41730|protein_coding|CODING|LOC_Os11g41730.1|4|1) FN4164-S.SNP.11:25066761 chr11:025066761 0 W/25066761-25066761 FN4164-S SNP T -> C AC=1;AN=170;BQB=0.989108;DP=3026;DP4=1309,1594,15,6;HOB=6.92042e-05;ICB=0.000139222;MQ=26;MQ0F=0.178123;MQB=0.99858;MQSB=0;RPB=0.320153;SGB=36.9825;VDB=0.686854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2115-S.SNP.11:25069960 chr11:025069960 0 W/25069960-25069960 FN2115-S SNP G -> T AC=2;AN=168;BQB=0.326957;DP=4060;DP4=2027,1955,19,28;HOB=0.0235261;ICB=0.494119;MQ=35;MQ0F=0.106897;MQB=0.214358;MQSB=0.548484;RPB=0.990246;SGB=-157.153;VDB=0.333281;EFF=INTRON(MODIFIER||||811|LOC_Os11g41750|protein_coding|CODING|LOC_Os11g41750.1|5|1) FN1533-S.SNP.11:25073409 chr11:025073409 0 W/25073409-25073409 FN1533-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN2089-S.SNP.11:25086777 chr11:025086777 0 W/25086777-25086777 FN2089-S SNP G -> T AC=1;AN=168;BQB=0.0697185;DP=2769;DP4=1939,800,16,5;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.10762;MQB=0.897368;MQSB=2.26705e-10;RPB=0.735345;SGB=-14.0801;VDB=0.404728;EFF=INTERGENIC(MODIFIER||||||||||1) FN1575-S.SNP.11:25094094 chr11:025094094 0 W/25094094-25094094 FN1575-S Single Base Substitution G-T INTERGENIC Homo SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN1575-S.SNP.11:25094095 chr11:025094095 0 W/25094095-25094095 FN1575-S Single Base Substitution C-T INTERGENIC Homo SNo: 1313, Mutant_ID: FN1575-S, Generation: M2, Mutations: 65, Genes: 28, Seed availability: Yes. FN1508-S.SNP.11:25096761 chr11:025096761 0 W/25096761-25096761 FN1508-S Single Base Substitution A-G INTERGENIC HET SNo: 1263, Mutant_ID: FN1508-S, Generation: M2, Mutations: 66, Genes: 24, Seed availability: Yes. FN442-S.SNP.11:25098969 chr11:025098969 0 W/25098969-25098969 FN442-S Single Base Substitution A-G INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. W554-1-1.SNP.11:25099743 chr11:025099743 0 W/25099743-25099743 W554-1-1 Single Base Substitution A-T INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN1348-S.SNP.11:25104823 chr11:025104823 0 W/25104823-25104823 FN1348-S Single Base Substitution C-G INTRON HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1239-S.SNP.11:25105567 chr11:025105567 0 W/25105567-25105567 FN1239-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os11g41780 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3455-S.SNP.11:25109066 chr11:025109066 0 W/25109066-25109066 FN3455-S SNP T -> G AC=1;AN=184;BQB=0.949769;DP=2675;DP4=1222,1359,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.86663e-06;MQSB=0.933343;RPB=0.8851;SGB=8.14452;VDB=0.9405;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.11:25114441 chr11:025114441 0 W/25114441-25114441 FN-346 Single Base Substitution G-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN854-S.SNP.11:25127601 chr11:025127601 0 W/25127601-25127601 FN854-S Single Base Substitution T-A INTERGENIC HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN-180.SNP.11:25130806 chr11:025130806 0 W/25130806-25130806 FN-180 Single Base Substitution G-A INTERGENIC HET SNo: 180, Mutant_ID: FN-180, Generation: M2, Mutations: 41, Genes: 69, Seed availability: No. FN929-S.SNP.11:25140634 chr11:025140634 0 W/25140634-25140634 FN929-S Single Base Substitution G-T INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2648-S.SNP.11:25143238 chr11:025143238 0 W/25143238-25143238 FN2648-S SNP G -> C AC=1;AN=200;BQB=0.989551;DP=5012;DP4=2359,2389,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00397e-07;MQSB=0.937714;RPB=0.981873;SGB=21.6694;VDB=0.83035;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.11:25145501 chr11:025145501 0 W/25145501-25145501 FN2441 SNP A -> G AC=1;AN=200;BQB=0.996523;DP=4513;DP4=2169,1904,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.15096e-17;MQSB=0.67286;RPB=0.250333;SGB=65.9573;VDB=0.37468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.11:25152958 chr11:025152958 0 W/25152958-25152958 FN3674-S SNP T -> C AC=2;AN=190;BQB=0.965948;DP=2917;DP4=1338,1418,17,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.08126e-15;MQSB=0.99455;RPB=0.975427;SGB=96.5165;VDB=0.84256;EFF=INTRON(MODIFIER||||574|LOC_Os11g41820|protein_coding|CODING|LOC_Os11g41820.1|1|1),INTRON(MODIFIER||||550|LOC_Os11g41820|protein_coding|CODING|LOC_Os11g41820.2|1|1) FN-290.SNP.11:25165647 chr11:025165647 0 W/25165647-25165647 FN-290 Single Base Substitution C-T INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN1069-S.SNP.11:25168808 chr11:025168808 0 W/25168808-25168808 FN1069-S Single Base Substitution G-A INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2426.SNP.11:25168815 chr11:025168815 0 W/25168815-25168815 FN2426 SNP T -> C AC=2;AN=200;BQB=0.317314;DP=4893;DP4=2042,2551,27,38;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000204374;MQB=1.0947e-39;MQSB=0.777475;RPB=0.979459;SGB=224.133;VDB=0.0604824;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.11:25173574 chr11:025173574 0 W/25173574-25173574 FN-185 Single Base Substitution C-T UTR_3_PRIME HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN2399.SNP.11:25180415 chr11:025180415 0 W/25180415-25180415 FN2399 SNP G -> C AC=2;AN=200;BQB=0.682319;DP=3702;DP4=1489,2020,10,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.41165e-16;MQSB=0.568097;RPB=0.606327;SGB=123.342;VDB=0.254811;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.11:25180458 chr11:025180458 0 W/25180458-25180458 FN2399 SNP G -> A AC=2;AN=200;BQB=0.553946;DP=3722;DP4=1563,1901,8,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.35635e-13;MQSB=0.880227;RPB=0.633293;SGB=65.5058;VDB=0.543117;EFF=INTERGENIC(MODIFIER||||||||||1) FN2399.SNP.11:25180459 chr11:025180459 0 W/25180459-25180459 FN2399 SNP G -> A AC=2;AN=200;BQB=0.972074;DP=3712;DP4=1574,1895,11,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.79297e-15;MQSB=0.730265;RPB=0.183395;SGB=17.5158;VDB=0.334646;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.11:25202320 chr11:025202320 0 W/25202320-25202320 FN579-S Single Base Substitution C-T INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN3578-S.SNP.11:25204448 chr11:025204448 0 W/25204448-25204448 FN3578-S SNP G -> A AC=2;AN=188;BQB=0.993237;DP=2757;DP4=1268,1393,14,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.22807e-20;MQSB=0.77954;RPB=0.846318;SGB=113.937;VDB=0.836214;EFF=INTRON(MODIFIER||||374|LOC_Os11g41900|protein_coding|CODING|LOC_Os11g41900.1|2|1) FN735-S.SNP.11:25207931 chr11:025207931 0 W/25207931-25207931 FN735-S Single Base Substitution C-T INTERGENIC HET SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN1415-S.SNP.11:25217197 chr11:025217197 0 W/25217197-25217197 FN1415-S Single Base Substitution G-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3809-S.SNP.11:25217561 chr11:025217561 0 W/25217561-25217561 FN3809-S SNP G -> A AC=1;AN=190;BQB=0.988438;DP=2783;DP4=1095,1599,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.76276e-08;MQSB=0.891945;RPB=0.572983;SGB=58.2031;VDB=0.481346;EFF=INTERGENIC(MODIFIER||||||||||1) FN1196-S.SNP.11:25218981 chr11:025218981 0 W/25218981-25218981 FN1196-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN4074-S.SNP.11:25225294 chr11:025225294 0 W/25225294-25225294 FN4074-S SNP T -> C AC=1;AN=182;BQB=0.995842;DP=2940;DP4=1425,1415,3,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.27826e-07;MQSB=0.662945;RPB=0.973062;SGB=53.1331;VDB=0.696823;EFF=INTERGENIC(MODIFIER||||||||||1) FN1258-S.SNP.11:25229965 chr11:025229965 0 W/25229965-25229965 FN1258-S Single Base Substitution C-T INTERGENIC HET SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3423-S.SNP.11:25230233 chr11:025230233 0 W/25230233-25230233 FN3423-S SNP G -> A AC=2;AN=184;BQB=0.430319;DP=3005;DP4=1722,1124,21,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.57642e-16;MQSB=0.917881;RPB=0.774984;SGB=120.271;VDB=0.24312;EFF=INTERGENIC(MODIFIER||||||||||1) FN857-S.SNP.11:25232820 chr11:025232820 0 W/25232820-25232820 FN857-S Single Base Substitution A-G INTERGENIC HET SNo: 763, Mutant_ID: FN857-S, Generation: M2, Mutations: 57, Genes: 9, Seed availability: Yes. FN4122-S.SNP.11:25233823 chr11:025233823 0 W/25233823-25233823 FN4122-S SNP T -> G AC=1;AN=182;BQB=0.881408;DP=2855;DP4=1476,1290,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.06184e-10;MQSB=0.996394;RPB=0.702957;SGB=75.6874;VDB=0.863292;EFF=INTERGENIC(MODIFIER||||||||||1) FN3553-S.SNP.11:25242115 chr11:025242115 0 W/25242115-25242115 FN3553-S SNP G -> A AC=1;AN=188;BQB=0.998379;DP=3765;DP4=2503,1141,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000265604;MQB=0.000462608;MQSB=5.34787e-28;RPB=0.827125;SGB=35.3493;VDB=0.941077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.11:25247462 chr11:025247462 0 W/25247462-25247462 FN2687-S SNP A -> G AC=1;AN=200;BQB=0.99778;DP=4807;DP4=2463,2180,2,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000177495;MQSB=0.931396;RPB=0.569679;SGB=18.639;VDB=0.038698;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y555|701|LOC_Os11g41990|protein_coding|CODING|LOC_Os11g41990.1|6|1),SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y554|700|LOC_Os11g41990|protein_coding|CODING|LOC_Os11g41990.2|6|1) W42-1-3S-1.SNP.11:25251153 chr11:025251153 0 W/25251153-25251153 W42-1-3S-1 Single Base Substitution A-C INTRON HOMO SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN4180-S.SNP.11:25257824 chr11:025257824 0 W/25257824-25257824 FN4180-S SNP C -> T AC=1;AN=170;BQB=0.997933;DP=2851;DP4=1461,1275,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.42038e-05;MQSB=0.872739;RPB=0.778719;SGB=38.987;VDB=0.26517;EFF=INTERGENIC(MODIFIER||||||||||1) FN1367-S.SNP.11:25262495 chr11:025262495 0 W/25262495-25262495 FN1367-S Single Base Substitution C-T UTR_3_PRIME Homo SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN1032-S.SNP.11:25266243 chr11:025266243 0 W/25266243-25266243 FN1032-S Single Base Substitution A-T INTERGENIC HOMO SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2327.SNP.11:25272142 chr11:025272142 0 W/25272142-25272142 FN2327 SNP G -> A AC=1;AN=192;BQB=0.653416;DP=9359;DP4=4994,3566,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000320547;MQB=2.05711e-11;MQSB=3.13432e-11;RPB=0.956071;SGB=-188.535;VDB=0.294733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.11:25275666 chr11:025275666 0 W/25275666-25275666 FN2582-S SNP G -> A AC=1;AN=198;BQB=0.708839;DP=6035;DP4=1981,3700,4,9;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0125932;MQB=0.953969;MQSB=6.27314e-36;RPB=0.721155;SGB=18.9639;VDB=0.256906;EFF=INTERGENIC(MODIFIER||||||||||1) W42-1-3S-1.SNP.11:25277760 chr11:025277760 0 W/25277760-25277760 W42-1-3S-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g42030 expressed protein SNo: 1409, Mutant_ID: W42-1-3S-1, Generation: M2, Mutations: 83, Genes: 77, Seed availability: No. FN2656-S.SNP.11:25284009 chr11:025284009 0 W/25284009-25284009 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.977864;DP=4936;DP4=2366,2328,16,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.82572e-21;MQSB=0.989828;RPB=0.93578;SGB=73.7728;VDB=0.796986;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.11:25295230 chr11:025295230 0 W/25295230-25295230 FN2092-S SNP C -> T AC=2;AN=168;BQB=0.966863;DP=3762;DP4=1877,1809,25,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.03239e-22;MQSB=0.918602;RPB=0.854175;SGB=-4.17128;VDB=0.417854;EFF=INTERGENIC(MODIFIER||||||||||1) FN508-S.SNP.11:25295409 chr11:025295409 0 W/25295409-25295409 FN508-S Single Base Substitution T-A INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN4249-S.SNP.11:25303709 chr11:025303709 0 W/25303709-25303709 FN4249-S SNP C -> T AC=2;AN=170;BQB=0.989431;DP=2548;DP4=1253,1218,9,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.76292e-13;MQSB=0.986113;RPB=0.793528;SGB=92.2986;VDB=0.399478;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.11:25306498 chr11:025306498 0 W/25306498-25306498 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.82773;DP=2658;DP4=1350,1205,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.47992e-09;MQSB=0.880572;RPB=0.866451;SGB=21.1058;VDB=0.315657;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.11:25315051 chr11:025315051 0 W/25315051-25315051 FN480-S Single Base Substitution C-T INTERGENIC HET SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN3503-S.SNP.11:25316046 chr11:025316046 0 W/25316046-25316046 FN3503-S SNP C -> G AC=1;AN=188;BQB=0.94176;DP=2848;DP4=1570,1212,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.81987e-08;MQSB=0.977922;RPB=0.0033461;SGB=32.441;VDB=0.00246621;EFF=UTR_3_PRIME(MODIFIER||57||648|LOC_Os11g42060|protein_coding|CODING|LOC_Os11g42060.1|1|1) FN631-S.SNP.11:25319996 chr11:025319996 0 W/25319996-25319996 FN631-S Single Base Substitution C-G INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN411-S.SNP.11:25323815 chr11:025323815 0 W/25323815-25323815 FN411-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g42070 Leucine Rich Repeat family protein, expressed SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. W466-5-1.SNP.11:25324961 chr11:025324961 0 W/25324961-25324961 W466-5-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g42070 Leucine Rich Repeat family protein, expressed SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN1673-S.SNP.11:25325916 chr11:025325916 0 W/25325916-25325916 FN1673-S SNP C -> T AC=1;AN=188;BQB=0.606281;DP=3369;DP4=1665,1678,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10781e-05;MQSB=0.998412;RPB=0.967684;SGB=25.3545;VDB=0.167265;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.11:25328023 chr11:025328023 0 W/25328023-25328023 FN461-S Single Base Substitution C-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN1285-S.SNP.11:25329773 chr11:025329773 0 W/25329773-25329773 FN1285-S Single Base Substitution G-A INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2555-S.SNP.11:25331717 chr11:025331717 0 W/25331717-25331717 FN2555-S SNP T -> A AC=2;AN=198;BQB=0.988833;DP=5043;DP4=2548,2266,22,16;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=5.46668e-13;MQSB=0.31871;RPB=0.965283;SGB=169.022;VDB=0.633863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2364.SNP.11:25332182 chr11:025332182 0 W/25332182-25332182 FN2364 SNP C -> T AC=1;AN=192;BQB=0.985248;DP=5319;DP4=2353,2408,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00131604;MQB=4.15654e-07;MQSB=0.985041;RPB=0.75867;SGB=-15.8974;VDB=0.171659;EFF=INTERGENIC(MODIFIER||||||||||1) FN868-S.SNP.11:25335968 chr11:025335968 0 W/25335968-25335968 FN868-S Single Base Substitution G-T INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2753-S.SNP.11:25338030 chr11:025338030 0 W/25338030-25338030 FN2753-S SNP C -> T AC=1;AN=200;BQB=0.49822;DP=4575;DP4=2218,2076,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.30257e-15;MQSB=0.996089;RPB=0.971306;SGB=45.1159;VDB=0.834692;EFF=INTERGENIC(MODIFIER||||||||||1) FN3518-S.SNP.11:25342379 chr11:025342379 0 W/25342379-25342379 FN3518-S SNP G -> T AC=1;AN=188;BQB=0.99008;DP=2614;DP4=1287,1270,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.21206e-07;MQSB=0.974613;RPB=0.652017;SGB=44.4357;VDB=0.0875327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q972K|1101|LOC_Os11g42090|protein_coding|CODING|LOC_Os11g42090.1|1|1) FN3518-S.SNP.11:25342380 chr11:025342380 0 W/25342380-25342380 FN3518-S SNP C -> A AC=1;AN=188;BQB=0.958749;DP=2611;DP4=1296,1259,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.72837e-08;MQSB=0.979065;RPB=0.501477;SGB=32.441;VDB=0.110959;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P971|1101|LOC_Os11g42090|protein_coding|CODING|LOC_Os11g42090.1|1|1) FN1622-S.SNP.11:25344579 chr11:025344579 0 W/25344579-25344579 FN1622-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g42090 Leucine Rich Repeat family protein, expressed SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1142-S.SNP.11:25345105 chr11:025345105 0 W/25345105-25345105 FN1142-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g42090 Leucine Rich Repeat family protein, expressed SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN1142-S.SNP.11:25345117 chr11:025345117 0 W/25345117-25345117 FN1142-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g42090 Leucine Rich Repeat family protein, expressed SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2247-S.SNP.11:25345624 chr11:025345624 0 W/25345624-25345624 FN2247-S SNP A -> G AC=2;AN=190;BQB=0.507825;DP=5604;DP4=2412,2612,28,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.37934e-22;MQSB=0.998105;RPB=0.687014;SGB=3.9482;VDB=3.52418e-05;EFF=INTERGENIC(MODIFIER||||||||||1) FN2779-S.SNP.11:25350606 chr11:025350606 0 W/25350606-25350606 FN2779-S SNP T -> C AC=1;AN=186;BQB=0.409034;DP=3848;DP4=1724,1797,14,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.40116e-12;MQSB=0.963085;RPB=0.779863;SGB=50.1053;VDB=0.400844;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.11:25350641 chr11:025350641 0 W/25350641-25350641 FN2673-S SNP A -> G AC=1;AN=200;BQB=0.890338;DP=5079;DP4=2620,2169,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84065e-13;MQSB=0.71791;RPB=0.800375;SGB=39.9056;VDB=0.19154;EFF=INTERGENIC(MODIFIER||||||||||1) FN677-S.SNP.11:25350644 chr11:025350644 0 W/25350644-25350644 FN677-S Single Base Substitution T-C INTERGENIC HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN3945-S.SNP.11:25352971 chr11:025352971 0 W/25352971-25352971 FN3945-S SNP T -> A AC=1;AN=168;BQB=0.966289;DP=2631;DP4=1236,1204,4,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.68491e-08;MQSB=0.990896;RPB=0.580686;SGB=-0.101747;VDB=0.66923;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.11:25363851 chr11:025363851 0 W/25363851-25363851 FN2620-S SNP C -> T AC=1;AN=186;BQB=0.209419;DP=3799;DP4=1798,1792,11,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.38372e-13;MQSB=0.866804;RPB=0.999201;SGB=90.9049;VDB=0.11535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.11:25369070 chr11:025369070 0 W/25369070-25369070 FN2584-S SNP G -> A AC=2;AN=198;BQB=0.401441;DP=4189;DP4=1880,1972,29,27;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00023872;MQB=2.71255e-33;MQSB=0.0440969;RPB=0.829319;SGB=251.734;VDB=0.000112143;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.11:25369071 chr11:025369071 0 W/25369071-25369071 FN2584-S SNP C -> T AC=2;AN=198;BQB=0.998777;DP=4204;DP4=1904,1969,30,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000237869;MQB=7.30185e-32;MQSB=0.0353498;RPB=0.768335;SGB=135.744;VDB=0.000131504;EFF=INTERGENIC(MODIFIER||||||||||1) FN3629-S.SNP.11:25387930 chr11:025387930 0 W/25387930-25387930 FN3629-S SNP A -> G AC=1;AN=190;BQB=0.997658;DP=2767;DP4=1266,1241,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.2908e-07;MQSB=0.988279;RPB=0.874343;SGB=58.2031;VDB=0.843751;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.11:25388743 chr11:025388743 0 W/25388743-25388743 FN946-S Single Base Substitution C-T INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN2226-S.SNP.11:25390326 chr11:025390326 0 W/25390326-25390326 FN2226-S SNP T -> G AC=2;AN=190;BQB=0.947208;DP=5466;DP4=2685,2358,23,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.30198e-22;MQSB=0.968291;RPB=0.49252;SGB=149.825;VDB=0.200413;EFF=INTERGENIC(MODIFIER||||||||||1) FN2436.SNP.11:25391171 chr11:025391171 0 W/25391171-25391171 FN2436 SNP G -> A AC=2;AN=200;BQB=0.329624;DP=2303;DP4=999,1026,17,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.05463e-16;MQSB=0.973595;RPB=0.724155;SGB=136.367;VDB=0.65677;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.11:25395274 chr11:025395274 0 W/25395274-25395274 FN2234-S SNP A -> T AC=1;AN=190;BQB=0.486814;DP=4947;DP4=2181,2433,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202143;MQB=8.37973e-07;MQSB=0.408161;RPB=0.958838;SGB=-17.653;VDB=0.0881721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R180S|614|LOC_Os11g42160|protein_coding|CODING|LOC_Os11g42160.1|2|1) FN2630-S.SNP.11:25401683 chr11:025401683 0 W/25401683-25401683 FN2630-S SNP C -> A AC=1;AN=200;BQB=0.738075;DP=4568;DP4=2147,2114,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31261e-08;MQSB=0.999225;RPB=0.604419;SGB=51.0851;VDB=0.826896;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.11:25420232 chr11:025420232 0 W/25420232-25420232 FN4068-S SNP T -> A AC=1;AN=182;BQB=0.847971;DP=3108;DP4=1603,1429,5,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.59289e-06;MQSB=0.987294;RPB=0.946046;SGB=48.6223;VDB=0.453607;EFF=INTERGENIC(MODIFIER||||||||||1) FN-213.SNP.11:25421805 chr11:025421805 0 W/25421805-25421805 FN-213 Single Base Substitution C-T INTERGENIC HET SNo: 212, Mutant_ID: FN-213, Generation: M2, Mutations: 46, Genes: 173, Seed availability: Yes. FN772-S.SNP.11:25428908 chr11:025428908 0 W/25428908-25428908 FN772-S Single Base Substitution T-G INTRON HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1561-S.SNP.11:25434957 chr11:025434957 0 W/25434957-25434957 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1190-S.SNP.11:25437102 chr11:025437102 0 W/25437102-25437102 FN1190-S Single Base Substitution T-C INTERGENIC HET SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN3849-S.SNP.11:25440076 chr11:025440076 0 W/25440076-25440076 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.889357;DP=2416;DP4=1142,1212,8,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=6.54061e-06;MQSB=0.00198641;RPB=0.654307;SGB=47.5512;VDB=0.683142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.11:25441397 chr11:025441397 0 W/25441397-25441397 FN1707-S SNP G -> T AC=1;AN=188;BQB=0.623319;DP=2511;DP4=1012,1446,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.31049e-09;MQSB=0.972615;RPB=0.997864;SGB=28.6195;VDB=0.976553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S479Y|652|LOC_Os11g42240|protein_coding|CODING|LOC_Os11g42240.1|1|1) FN2137-S.SNP.11:25447022 chr11:025447022 0 W/25447022-25447022 FN2137-S SNP A -> G AC=2;AN=168;BQB=0.0640505;DP=2976;DP4=2088,841,30,8;HOB=0.0235261;ICB=0.494119;MQ=21;MQ0F=0.335013;MQB=0.0288193;MQSB=5.84192e-37;RPB=0.450056;SGB=-176.456;VDB=0.447312;EFF=INTERGENIC(MODIFIER||||||||||1) FN2332.SNP.11:25460024 chr11:025460024 0 W/25460024-25460024 FN2332 SNP G -> A AC=1;AN=192;BQB=0.999414;DP=4332;DP4=1938,2047,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=22;MQ0F=0.234072;MQB=0.691695;MQSB=1.07301e-34;RPB=0.646414;SGB=75.4235;VDB=0.275321;EFF=INTERGENIC(MODIFIER||||||||||1) FN553-S.SNP.11:25460512 chr11:025460512 0 W/25460512-25460512 FN553-S Single Base Substitution C-T INTERGENIC HOMO SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3574-S.SNP.11:25464636 chr11:025464636 0 W/25464636-25464636 FN3574-S SNP G -> T AC=2;AN=188;BQB=0.507205;DP=3215;DP4=1656,1475,13,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.73973e-19;MQSB=0.974468;RPB=0.171819;SGB=126.215;VDB=0.41385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N320K|379|LOC_Os11g42280|protein_coding|CODING|LOC_Os11g42280.1|2|1) FN3574-S.SNP.11:25464637 chr11:025464637 0 W/25464637-25464637 FN3574-S SNP T -> A AC=2;AN=188;BQB=0.970973;DP=3208;DP4=1441,1464,17,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.26684e-19;MQSB=0.956348;RPB=0.0753482;SGB=-5.22045;VDB=0.257398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N320I|379|LOC_Os11g42280|protein_coding|CODING|LOC_Os11g42280.1|2|1) FN-243.SNP.11:25468898 chr11:025468898 0 W/25468898-25468898 FN-243 Single Base Substitution C-T INTERGENIC HET SNo: 242, Mutant_ID: FN-243, Generation: M2, Mutations: 51, Genes: 71, Seed availability: Yes. FN430-S.SNP.11:25475478 chr11:025475478 0 W/25475478-25475478 FN430-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g42300 OsFBX434 - F-box domain containing protein, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN430-S.SNP.11:25475479 chr11:025475479 0 W/25475479-25475479 FN430-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3782-S.SNP.11:25481328 chr11:025481328 0 W/25481328-25481328 FN3782-S SNP C -> T AC=1;AN=190;BQB=0.974514;DP=3641;DP4=1908,1654,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0285636;MQB=0.0277098;MQSB=0.999878;RPB=0.443564;SGB=39.9877;VDB=0.906563;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D397|1995|LOC_Os11g42320|protein_coding|CODING|LOC_Os11g42320.1|1|1) FN4311-S.SNP.11:25482998 chr11:025482998 0 W/25482998-25482998 FN4311-S SNP A -> G AC=2;AN=170;BQB=0.726354;DP=3147;DP4=1287,1780,7,11;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.0406737;MQB=0.675347;MQSB=0.999148;RPB=0.78191;SGB=52.0913;VDB=0.620886;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E954G|1995|LOC_Os11g42320|protein_coding|CODING|LOC_Os11g42320.1|1|1) FN3515-S.SNP.11:25501492 chr11:025501492 0 W/25501492-25501492 FN3515-S SNP C -> A AC=1;AN=188;BQB=0.989415;DP=3299;DP4=1897,1301,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.73599e-08;MQSB=0.994791;RPB=0.786821;SGB=32.441;VDB=0.286182;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.11:25501493 chr11:025501493 0 W/25501493-25501493 FN3515-S SNP T -> A AC=1;AN=188;BQB=0.517796;DP=3300;DP4=1918,1290,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.86693e-06;MQSB=0.970282;RPB=0.927776;SGB=28.8977;VDB=0.211022;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.11:25501494 chr11:025501494 0 W/25501494-25501494 FN3515-S SNP T -> C AC=1;AN=188;BQB=0.590864;DP=3301;DP4=1758,1297,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.82245e-09;MQSB=0.956132;RPB=0.42166;SGB=3.99491;VDB=0.093681;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.11:25506492 chr11:025506492 0 W/25506492-25506492 FN945-S Single Base Substitution G-C INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2166-S.SNP.11:25507958 chr11:025507958 0 W/25507958-25507958 FN2166-S SNP C -> T AC=1;AN=168;BQB=0.102732;DP=4609;DP4=2151,2414,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.41932e-09;MQSB=0.978166;RPB=0.580882;SGB=-72.7757;VDB=0.662885;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.11:25511288 chr11:025511288 0 W/25511288-25511288 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.976232;DP=2177;DP4=1236,859,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=37;MQ0F=0.0491502;MQB=0.49395;MQSB=0.000742429;RPB=0.996904;SGB=30.1021;VDB=0.853153;EFF=INTRON(MODIFIER||||462|LOC_Os11g42390|protein_coding|CODING|LOC_Os11g42390.1|1|1) FN1563-S.SNP.11:25515776 chr11:025515776 0 W/25515776-25515776 FN1563-S Single Base Substitution G-A INTERGENIC Homo SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN1662-S.SNP.11:25517760 chr11:025517760 0 W/25517760-25517760 FN1662-S Single Base Substitution C-T INTERGENIC HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN-150.SNP.11:25521387 chr11:025521387 0 W/25521387-25521387 FN-150 Single Base Substitution A-G INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN1557-S.SNP.11:25523186 chr11:025523186 0 W/25523186-25523186 FN1557-S Single Base Substitution C-G NON_SYNONYMOUS_CODING Homo LOC_Os11g42410 expressed protein SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN1089-S.SNP.11:25524108 chr11:025524108 0 W/25524108-25524108 FN1089-S Single Base Substitution G-A INTRON HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2211-S.SNP.11:25527890 chr11:025527890 0 W/25527890-25527890 FN2211-S SNP C -> A AC=1;AN=190;BQB=0.186182;DP=4553;DP4=2140,2137,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03231e-12;MQSB=0.993353;RPB=0.975152;SGB=-12.1142;VDB=0.853216;EFF=INTERGENIC(MODIFIER||||||||||1) FN3376-S.SNP.11:25546240 chr11:025546240 0 W/25546240-25546240 FN3376-S SNP C -> T AC=2;AN=184;BQB=0.998631;DP=3888;DP4=1963,1710,36,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.28576e-30;MQSB=0.802704;RPB=0.88208;SGB=256.745;VDB=0.700885;EFF=INTRON(MODIFIER||||603|LOC_Os11g42440|protein_coding|CODING|LOC_Os11g42440.1|6|1) FN1302-S.SNP.11:25548546 chr11:025548546 0 W/25548546-25548546 FN1302-S Single Base Substitution T-C INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN740-S.SNP.11:25553889 chr11:025553889 0 W/25553889-25553889 FN740-S Single Base Substitution T-C INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN740-S.SNP.11:25553891 chr11:025553891 0 W/25553891-25553891 FN740-S Single Base Substitution G-A INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN2265-S.SNP.11:25557338 chr11:025557338 0 W/25557338-25557338 FN2265-S SNP C -> T AC=1;AN=190;BQB=0.95089;DP=4913;DP4=2223,2262,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36164e-10;MQSB=0.363617;RPB=0.954186;SGB=13.4344;VDB=0.989018;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.11:25565984 chr11:025565984 0 W/25565984-25565984 FN-345 Single Base Substitution A-G INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4154-S.SNP.11:25569446 chr11:025569446 0 W/25569446-25569446 FN4154-S SNP G -> T AC=1;AN=170;BQB=0.999999;DP=2619;DP4=1008,1293,7,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.78639e-09;MQSB=0.867974;RPB=0.757733;SGB=70.0854;VDB=0.247255;EFF=INTERGENIC(MODIFIER||||||||||1) FN1349-S.SNP.11:25579197 chr11:025579197 0 W/25579197-25579197 FN1349-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN1035-S.SNP.11:25579475 chr11:025579475 0 W/25579475-25579475 FN1035-S Single Base Substitution G-A INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN1429-S.SNP.11:25580506 chr11:025580506 0 W/25580506-25580506 FN1429-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3355-S.SNP.11:25586323 chr11:025586323 0 W/25586323-25586323 FN3355-S SNP C -> A AC=1;AN=184;BQB=0.969195;DP=3173;DP4=1406,1648,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.52572e-07;MQSB=0.511726;RPB=0.974092;SGB=53.2642;VDB=0.52806;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.11:25587631 chr11:025587631 0 W/25587631-25587631 FN1410-S Single Base Substitution G-C INTERGENIC HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN3968-S.SNP.11:25588704 chr11:025588704 0 W/25588704-25588704 FN3968-S SNP C -> T AC=1;AN=168;BQB=0.856772;DP=2674;DP4=1257,1320,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.51326e-08;MQSB=0.999906;RPB=0.90411;SGB=45.0404;VDB=0.372154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.11:25589777 chr11:025589777 0 W/25589777-25589777 FN1549-S Single Base Substitution A-T INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1541-S.SNP.11:25595954 chr11:025595954 0 W/25595954-25595954 FN1541-S Single Base Substitution T-C INTERGENIC Homo SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN1708-S.SNP.11:25612310 chr11:025612310 0 W/25612310-25612310 FN1708-S SNP C -> T AC=1;AN=188;BQB=0.162086;DP=3285;DP4=1580,1624,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.84172e-05;MQSB=0.901399;RPB=0.328914;SGB=-83.9838;VDB=0.136845;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.11:25614404 chr11:025614404 0 W/25614404-25614404 FN3516-S SNP A -> C AC=1;AN=188;BQB=0.98387;DP=2737;DP4=1347,1270,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.31605e-05;MQSB=0.955746;RPB=0.580294;SGB=35.3493;VDB=0.443437;EFF=INTERGENIC(MODIFIER||||||||||1) FN2742-S.SNP.11:25624131 chr11:025624131 0 W/25624131-25624131 FN2742-S SNP G -> T AC=1;AN=200;BQB=0.239876;DP=4799;DP4=2273,2218,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29238e-08;MQSB=0.929735;RPB=0.0441134;SGB=43.8747;VDB=0.534261;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.11:25629170 chr11:025629170 0 W/25629170-25629170 FN968-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN-246.SNP.11:25632500 chr11:025632500 0 W/25632500-25632500 FN-246 Single Base Substitution A-G INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN2498.SNP.11:25637723 chr11:025637723 0 W/25637723-25637723 FN2498 SNP C -> G AC=1;AN=200;BQB=0.86846;DP=4621;DP4=2279,2116,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000216403;MQB=1.4613e-15;MQSB=0.976775;RPB=0.637609;SGB=27.1468;VDB=0.540936;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q1288E|1471|LOC_Os11g42590|protein_coding|CODING|LOC_Os11g42590.1|8|1) FN2126-S.SNP.11:25650211 chr11:025650211 0 W/25650211-25650211 FN2126-S SNP A -> C AC=1;AN=168;BQB=0.351776;DP=3535;DP4=1806,1696,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.91772e-05;MQSB=0.999682;RPB=0.7049;SGB=-57.0838;VDB=0.150845;EFF=INTRON(MODIFIER||||912|LOC_Os11g42610|protein_coding|CODING|LOC_Os11g42610.1|4|1) FN1058-S.SNP.11:25659838 chr11:025659838 0 W/25659838-25659838 FN1058-S Single Base Substitution G-A INTRON HOMO SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1121-S.SNP.11:25659838 chr11:025659838 0 W/25659838-25659838 FN1121-S Single Base Substitution G-A INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN753-S.SNP.11:25662623 chr11:025662623 0 W/25662623-25662623 FN753-S Single Base Substitution G-C INTRON HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN3487-S.SNP.11:25663152 chr11:025663152 0 W/25663152-25663152 FN3487-S SNP C -> T AC=1;AN=184;BQB=0.505595;DP=3108;DP4=1884,1108,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0608108;MQB=0.878459;MQSB=1.94549e-37;RPB=0.479308;SGB=32.2261;VDB=0.926917;EFF=INTRON(MODIFIER||||1651|LOC_Os11g42620|protein_coding|CODING|LOC_Os11g42620.1|2|1) FN591-S.SNP.11:25663420 chr11:025663420 0 W/25663420-25663420 FN591-S Single Base Substitution C-T INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN591-S.SNP.11:25663421 chr11:025663421 0 W/25663421-25663421 FN591-S Single Base Substitution C-T INTERGENIC HET SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN868-S.SNP.11:25663870 chr11:025663870 0 W/25663870-25663870 FN868-S Single Base Substitution T-G INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN868-S.SNP.11:25663871 chr11:025663871 0 W/25663871-25663871 FN868-S Single Base Substitution C-T INTERGENIC HET SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN-310.SNP.11:25663917 chr11:025663917 0 W/25663917-25663917 FN-310 Single Base Substitution T-C INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN2559-S.SNP.11:25668914 chr11:025668914 0 W/25668914-25668914 FN2559-S SNP G -> A AC=1;AN=196;BQB=0.890113;DP=3706;DP4=2041,1517,6,2;HOB=5.20616e-05;ICB=0.000104654;MQ=48;MQ0F=0;MQB=0.000446651;MQSB=0.8299;RPB=0.992286;SGB=31.1689;VDB=0.538025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R430Q|2096|LOC_Os11g42630|protein_coding|CODING|LOC_Os11g42630.1|1|1) FN2329.SNP.11:25672474 chr11:025672474 0 W/25672474-25672474 FN2329 SNP T -> C AC=1;AN=192;BQB=0.957999;DP=4415;DP4=2053,2055,9,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.64849e-11;MQSB=0.967862;RPB=1;SGB=68.2948;VDB=0.729288;EFF=SYNONYMOUS_CODING(LOW|SILENT|taT/taC|Y1571|2096|LOC_Os11g42630|protein_coding|CODING|LOC_Os11g42630.1|4|1) FN_N1-169-1.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 FN_N1-169-1 Single Base Substitution G-A Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. N1-169-2.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-2 Single Base Substitution G-A INTRON HET SNo: 1382, Mutant_ID: N1-169-2, Generation: M2, Mutations: 68, Genes: 25, Seed availability: Yes. N1-169-3.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-3 Single Base Substitution G-A INTRON HET SNo: 1383, Mutant_ID: N1-169-3, Generation: M2, Mutations: 29, Genes: 11, Seed availability: Yes. N1-169-4.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-4 Single Base Substitution G-A INTRON Homo SNo: 1384, Mutant_ID: N1-169-4, Generation: M2, Mutations: 23, Genes: 8, Seed availability: No. N1-169-5.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-5 Single Base Substitution G-A INTRON Homo SNo: 1385, Mutant_ID: N1-169-5, Generation: M2, Mutations: 40, Genes: 78, Seed availability: Yes. N1-169-6.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-6 Single Base Substitution G-A INTRON Homo SNo: 1386, Mutant_ID: N1-169-6, Generation: M2, Mutations: 34, Genes: 76, Seed availability: Yes. N1-169-7.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-7 Single Base Substitution G-A INTRON HET SNo: 1387, Mutant_ID: N1-169-7, Generation: M2, Mutations: 36, Genes: 15, Seed availability: Yes. N1-169-8.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-8 Single Base Substitution G-A INTRON HET SNo: 1388, Mutant_ID: N1-169-8, Generation: M2, Mutations: 35, Genes: 14, Seed availability: Yes. N1-169-9.SNP.11:25681971 chr11:025681971 0 W/25681971-25681971 N1-169-9 Single Base Substitution G-A INTRON HET SNo: 1389, Mutant_ID: N1-169-9, Generation: M2, Mutations: 36, Genes: 13, Seed availability: Yes. FN1633-S.SNP.11:25696881 chr11:025696881 0 W/25696881-25696881 FN1633-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g42660 Leucine Rich Repeat family protein, expressed SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN1196-S.SNP.11:25701160 chr11:025701160 0 W/25701160-25701160 FN1196-S Single Base Substitution T-C INTERGENIC HET SNo: 1029, Mutant_ID: FN1196-S, Generation: M2, Mutations: 71, Genes: 29, Seed availability: Yes. FN1042-S.SNP.11:25702674 chr11:025702674 0 W/25702674-25702674 FN1042-S Single Base Substitution C-T INTERGENIC HET SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN2729-S.SNP.11:25706488 chr11:025706488 0 W/25706488-25706488 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.279909;DP=4971;DP4=2554,2244,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.38468e-10;MQSB=0.880405;RPB=0.966759;SGB=77.2904;VDB=0.994187;EFF=INTERGENIC(MODIFIER||||||||||1) FN3500-S.SNP.11:25711922 chr11:025711922 0 W/25711922-25711922 FN3500-S SNP G -> T AC=2;AN=188;BQB=0.680891;DP=3236;DP4=1266,1870,17,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.92205e-17;MQSB=0.890876;RPB=0.917261;SGB=66.7689;VDB=0.757335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.11:25718865 chr11:025718865 0 W/25718865-25718865 FN3941-S SNP C -> A AC=2;AN=168;BQB=0.879684;DP=2843;DP4=1338,1372,10,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.75012e-17;MQSB=0.963534;RPB=0.386246;SGB=127.497;VDB=0.980875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.11:25720880 chr11:025720880 0 W/25720880-25720880 FN2758-S SNP C -> T AC=1;AN=200;BQB=0.962348;DP=4386;DP4=2113,2039,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.71815e-10;MQSB=0.986824;RPB=0.242397;SGB=26.8797;VDB=0.404255;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V100|331|LOC_Os11g42700|protein_coding|CODING|LOC_Os11g42700.1|1|1) FN835-S.SNP.11:25722508 chr11:025722508 0 W/25722508-25722508 FN835-S Single Base Substitution A-G INTERGENIC HET SNo: 747, Mutant_ID: FN835-S, Generation: M2, Mutations: 76, Genes: 48, Seed availability: Yes. FN899-S.SNP.11:25728381 chr11:025728381 0 W/25728381-25728381 FN899-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g42710 retrotransposon protein, putative, unclassified, expressed SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN2472.SNP.11:25729233 chr11:025729233 0 W/25729233-25729233 FN2472 SNP G -> A AC=1;AN=200;BQB=0.988933;DP=4829;DP4=2669,1944,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62974e-09;MQSB=0.995291;RPB=0.87982;SGB=61.9006;VDB=0.241953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1087M|1146|LOC_Os11g42710|protein_coding|CODING|LOC_Os11g42710.1|5|1) FN2630-S.SNP.11:25734078 chr11:025734078 0 W/25734078-25734078 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.892521;DP=4723;DP4=2249,2176,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.31493e-18;MQSB=0.922094;RPB=0.570344;SGB=94.3471;VDB=0.417943;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A527|1385|LOC_Os11g42720|protein_coding|CODING|LOC_Os11g42720.1|3|1) FN3296-S.SNP.11:25736151 chr11:025736151 0 W/25736151-25736151 FN3296-S SNP C -> T AC=1;AN=184;BQB=0.976082;DP=4199;DP4=1894,2147,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.000714456;MQB=0.448221;MQSB=0.00039024;RPB=0.999213;SGB=8.14452;VDB=0.605799;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S1102|1385|LOC_Os11g42720|protein_coding|CODING|LOC_Os11g42720.1|5|1) FN_788-1-1.SNP.11:25750292 chr11:025750292 0 W/25750292-25750292 FN_788-1-1 Single Base Substitution C-T HET SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN-66.SNP.11:25754712 chr11:025754712 0 W/25754712-25754712 FN-66 Single Base Substitution A-G INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN1097-S.SNP.11:25755184 chr11:025755184 0 W/25755184-25755184 FN1097-S Single Base Substitution T-C INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3751-S.SNP.11:25755851 chr11:025755851 0 W/25755851-25755851 FN3751-S SNP A -> T AC=2;AN=190;BQB=0.910033;DP=3250;DP4=1552,1541,19,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.08642e-22;MQSB=0.902523;RPB=0.590661;SGB=114.286;VDB=0.208161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.11:25768101 chr11:025768101 0 W/25768101-25768101 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.966186;DP=2516;DP4=1635,768,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.60012e-10;MQSB=0.114108;RPB=0.998196;SGB=49.835;VDB=0.0678886;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.11:25769559 chr11:025769559 0 W/25769559-25769559 FN3599-S SNP C -> T AC=1;AN=188;BQB=0.929566;DP=2587;DP4=1368,1153,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.04252e-08;MQSB=0.968286;RPB=0.9967;SGB=48.979;VDB=0.300087;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L400|545|LOC_Os11g42790|protein_coding|CODING|LOC_Os11g42790.1|11|1) FN466-S.SNP.11:25775289 chr11:025775289 0 W/25775289-25775289 FN466-S Single Base Substitution T-A INTERGENIC HOMO SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN471-S.SNP.11:25775909 chr11:025775909 0 W/25775909-25775909 FN471-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN4181-S.SNP.11:25784329 chr11:025784329 0 W/25784329-25784329 FN4181-S SNP G -> A AC=2;AN=170;BQB=0.977335;DP=2427;DP4=1166,1189,10,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.04043e-09;MQSB=0.802423;RPB=0.0972919;SGB=48.6486;VDB=0.209099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2415.SNP.11:25791050 chr11:025791050 0 W/25791050-25791050 FN2415 SNP G -> A AC=1;AN=200;BQB=0.332294;DP=4578;DP4=1738,2102,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15646e-06;MQSB=2.8254e-08;RPB=0.805175;SGB=6.27959;VDB=0.897668;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.11:25798806 chr11:025798806 0 W/25798806-25798806 FN1047-S Single Base Substitution C-G INTERGENIC HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3607-S.SNP.11:25799317 chr11:025799317 0 W/25799317-25799317 FN3607-S SNP T -> A AC=1;AN=190;BQB=0.934001;DP=3235;DP4=1484,1585,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.3114e-06;MQSB=0.957425;RPB=0.401036;SGB=32.5467;VDB=0.632396;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.11:25808715 chr11:025808715 0 W/25808715-25808715 FN2767-S SNP G -> T AC=1;AN=198;BQB=0.5013;DP=4218;DP4=1761,2082,4,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61556e-06;MQSB=0.560831;RPB=0.682867;SGB=26.7492;VDB=0.802788;EFF=INTRON(MODIFIER||||343|LOC_Os11g42850|protein_coding|CODING|LOC_Os11g42850.1|2|1),INTRON(MODIFIER||||315|LOC_Os11g42850|protein_coding|CODING|LOC_Os11g42850.2|3|1) FN734-S.SNP.11:25810621 chr11:025810621 0 W/25810621-25810621 FN734-S Single Base Substitution G-A INTERGENIC HET SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN-67.SNP.11:25815547 chr11:025815547 0 W/25815547-25815547 FN-67 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g42860 expressed protein SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2791-S.SNP.11:25822062 chr11:025822062 0 W/25822062-25822062 FN2791-S SNP C -> G AC=1;AN=198;BQB=0.896804;DP=3845;DP4=1960,1679,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=4.41774e-05;MQSB=0.000300402;RPB=0.998404;SGB=58.1246;VDB=0.705566;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.11:25825917 chr11:025825917 0 W/25825917-25825917 FN812-S Single Base Substitution T-A INTERGENIC HOMO SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN631-S.SNP.11:25827639 chr11:025827639 0 W/25827639-25827639 FN631-S Single Base Substitution A-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN3356-S.SNP.11:25828495 chr11:025828495 0 W/25828495-25828495 FN3356-S SNP C -> A AC=1;AN=184;BQB=0.632327;DP=3391;DP4=1529,1749,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.33737e-07;MQSB=0.622676;RPB=0.896198;SGB=42.7914;VDB=0.122864;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.11:25832413 chr11:025832413 0 W/25832413-25832413 FN1467-S Single Base Substitution C-T INTRON HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN2494.SNP.11:25842936 chr11:025842936 0 W/25842936-25842936 FN2494 SNP G -> A AC=2;AN=200;BQB=0.607757;DP=4983;DP4=2390,2181,21,23;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0;MQB=2.2931e-06;MQSB=0.155562;RPB=0.925112;SGB=2.62419;VDB=0.397348;EFF=INTRON(MODIFIER||||1133|LOC_Os11g42900|protein_coding|CODING|LOC_Os11g42900.1|8|1) FN3343-S.SNP.11:25885237 chr11:025885237 0 W/25885237-25885237 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.999508;DP=2265;DP4=924,1244,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0;MQB=0.00586014;MQSB=0.944723;RPB=0.815692;SGB=53.2642;VDB=0.550846;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.11:25885317 chr11:025885317 0 W/25885317-25885317 FN4024-S SNP C -> A AC=2;AN=168;BQB=0.999782;DP=1999;DP4=834,953,9,14;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0;MQB=1.00324e-11;MQSB=0.0184369;RPB=0.122416;SGB=69.0561;VDB=0.12516;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.11:25885318 chr11:025885318 0 W/25885318-25885318 FN4024-S SNP G -> A AC=2;AN=168;BQB=0.695598;DP=2016;DP4=850,917,9,16;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0;MQB=9.68907e-11;MQSB=0.262335;RPB=0.189357;SGB=-12.3568;VDB=0.279773;EFF=INTERGENIC(MODIFIER||||||||||1) FN4234-S.SNP.11:25892805 chr11:025892805 0 W/25892805-25892805 FN4234-S SNP A -> G AC=2;AN=170;BQB=0.947405;DP=2360;DP4=1155,1098,13,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.43322e-10;MQSB=0.166127;RPB=0.641215;SGB=62.4192;VDB=0.855679;EFF=INTERGENIC(MODIFIER||||||||||1) FN3439-S.SNP.11:25901391 chr11:025901391 0 W/25901391-25901391 FN3439-S SNP T -> C AC=1;AN=184;BQB=0.930705;DP=3014;DP4=1156,1732,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0232249;MQB=0.980088;MQSB=1.86758e-22;RPB=0.559635;SGB=35.1773;VDB=0.260793;EFF=INTERGENIC(MODIFIER||||||||||1) FN1726-S.SNP.11:25902084 chr11:025902084 0 W/25902084-25902084 FN1726-S SNP T -> A AC=1;AN=188;BQB=0.0926918;DP=3191;DP4=1808,1355,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=5.63141e-05;MQSB=0.963295;RPB=0.817254;SGB=-13.3699;VDB=0.766815;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.11:25907133 chr11:025907133 0 W/25907133-25907133 FN893-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g42980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. FN2655-S.SNP.11:25965714 chr11:025965714 0 W/25965714-25965714 FN2655-S SNP G -> T AC=1;AN=200;BQB=0.700622;DP=4443;DP4=2182,2028,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.90903e-09;MQSB=0.548078;RPB=0.285843;SGB=68.0801;VDB=0.0486643;EFF=INTERGENIC(MODIFIER||||||||||1) FN-316.SNP.11:25971672 chr11:025971672 0 W/25971672-25971672 FN-316 Single Base Substitution G-A INTERGENIC HET SNo: 311, Mutant_ID: FN-316, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1639-S.SNP.11:25984422 chr11:025984422 0 W/25984422-25984422 FN1639-S Single Base Substitution C-A INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN4149-S.SNP.11:26016058 chr11:026016058 0 W/26016058-26016058 FN4149-S SNP C -> A AC=2;AN=170;BQB=0.994977;DP=2409;DP4=1115,1227,4,15;HOB=0.0232526;ICB=0.494188;MQ=35;MQ0F=0.0361146;MQB=0.015269;MQSB=4.62371e-07;RPB=0.847582;SGB=78.9707;VDB=0.311257;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K231N|526|LOC_Os11g43110|protein_coding|CODING|LOC_Os11g43110.1|1|1) FN3939-S.SNP.11:26032957 chr11:026032957 0 W/26032957-26032957 FN3939-S SNP G -> A AC=2;AN=158;BQB=0.993372;DP=2418;DP4=1094,1159,10,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.33292e-10;MQSB=0.0269144;RPB=0.834288;SGB=33.2965;VDB=0.309311;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.11:26033199 chr11:026033199 0 W/26033199-26033199 FN1682-S SNP C -> T AC=2;AN=188;BQB=0.859512;DP=2877;DP4=1120,1668,15,18;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.06166e-09;MQSB=0.900379;RPB=0.999802;SGB=31.7742;VDB=0.873805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.11:26034302 chr11:026034302 0 W/26034302-26034302 FN2678-S SNP T -> C AC=1;AN=200;BQB=0.999981;DP=4965;DP4=2541,2176,14,6;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0;MQB=0.0613239;MQSB=5.65913e-16;RPB=0.926606;SGB=37.3004;VDB=0.910788;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.11:26035325 chr11:026035325 0 W/26035325-26035325 FN_807-3-1 Single Base Substitution C-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2656-S.SNP.11:26037426 chr11:026037426 0 W/26037426-26037426 FN2656-S SNP C -> T AC=1;AN=200;BQB=0.485356;DP=4678;DP4=2296,2099,18,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000213767;MQB=2.01297e-21;MQSB=0.995993;RPB=0.982776;SGB=150.973;VDB=0.366728;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-213-1.SNP.11:26037750 chr11:026037750 0 W/26037750-26037750 FN_N1-213-1 Single Base Substitution G-C HET SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN3347-S.SNP.11:26042030 chr11:026042030 0 W/26042030-26042030 FN3347-S SNP G -> T AC=1;AN=184;BQB=0.714745;DP=2878;DP4=1485,1315,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0104239;MQB=0.00403185;MQSB=0.572217;RPB=0.678931;SGB=98.4821;VDB=0.300361;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caG/caT|Q604H|725|LOC_Os11g43150|protein_coding|CODING|LOC_Os11g43150.1|3|1) FN3713-S.SNP.11:26057909 chr11:026057909 0 W/26057909-26057909 FN3713-S SNP T -> C AC=1;AN=190;BQB=0.991043;DP=3065;DP4=1491,1452,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.24617e-09;MQSB=0.981386;RPB=0.332705;SGB=39.6545;VDB=0.793023;EFF=INTRON(MODIFIER||||264|LOC_Os11g43200|protein_coding|CODING|LOC_Os11g43200.1|2|1) FN4184-S.SNP.11:26066165 chr11:026066165 0 W/26066165-26066165 FN4184-S SNP A -> G AC=1;AN=170;BQB=0.987504;DP=2547;DP4=1308,1136,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.28836e-06;MQSB=0.955009;RPB=0.931525;SGB=27.9928;VDB=0.494762;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Ctt|F123L|414|LOC_Os11g43210|protein_coding|CODING|LOC_Os11g43210.1|1|1) FN2751-S.SNP.11:26071961 chr11:026071961 0 W/26071961-26071961 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.521271;DP=4812;DP4=2037,2542,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.54021e-06;MQSB=0.940885;RPB=0.515135;SGB=35.8441;VDB=0.794121;EFF=INTERGENIC(MODIFIER||||||||||1) FN3355-S.SNP.11:26079703 chr11:026079703 0 W/26079703-26079703 FN3355-S SNP C -> G AC=1;AN=184;BQB=0.857894;DP=2972;DP4=1455,1408,8,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.24168e-12;MQSB=0.931854;RPB=0.879459;SGB=38.4058;VDB=0.904198;EFF=INTRON(MODIFIER||||825|LOC_Os11g43230|protein_coding|CODING|LOC_Os11g43230.1|2|1) FN3681-S.SNP.11:26080385 chr11:026080385 0 W/26080385-26080385 FN3681-S SNP T -> G AC=2;AN=190;BQB=0.95513;DP=2747;DP4=1236,1395,12,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.10073e-19;MQSB=0.970072;RPB=0.731795;SGB=140.173;VDB=0.682406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y329S|825|LOC_Os11g43230|protein_coding|CODING|LOC_Os11g43230.1|2|1) FN1268-S.SNP.11:26085529 chr11:026085529 0 W/26085529-26085529 FN1268-S Single Base Substitution T-G INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN-166.SNP.11:26086243 chr11:026086243 0 W/26086243-26086243 FN-166 Single Base Substitution C-T INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN3858-S.SNP.11:26088359 chr11:026088359 0 W/26088359-26088359 FN3858-S SNP G -> T AC=1;AN=158;BQB=0.943056;DP=2070;DP4=945,1046,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.27447e-07;MQSB=0.0744794;RPB=0.621707;SGB=14.3409;VDB=0.209801;EFF=UTR_3_PRIME(MODIFIER||218||848|LOC_Os11g43250|protein_coding|CODING|LOC_Os11g43250.1|1|1) FN794-S.SNP.11:26088583 chr11:026088583 0 W/26088583-26088583 FN794-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g43250 Leucine Rich Repeat family protein, expressed SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN1442-S.SNP.11:26089589 chr11:026089589 0 W/26089589-26089589 FN1442-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g43250 Leucine Rich Repeat family protein, expressed SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN4255-S.SNP.11:26091651 chr11:026091651 0 W/26091651-26091651 FN4255-S SNP A -> G AC=1;AN=170;BQB=0.974564;DP=2550;DP4=1236,1238,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.45045e-07;MQSB=0.841731;RPB=0.693247;SGB=43.4296;VDB=0.493164;EFF=INTERGENIC(MODIFIER||||||||||1) FN2690-S.SNP.11:26096576 chr11:026096576 0 W/26096576-26096576 FN2690-S SNP A -> G AC=1;AN=200;BQB=0.519417;DP=4896;DP4=2435,2304,16,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000204248;MQB=2.55006e-08;MQSB=0.113242;RPB=0.987872;SGB=72.7161;VDB=0.346881;EFF=INTERGENIC(MODIFIER||||||||||1) FN2464.SNP.11:26099728 chr11:026099728 0 W/26099728-26099728 FN2464 SNP T -> A AC=1;AN=200;BQB=0.735695;DP=4491;DP4=2186,1979,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53271e-12;MQSB=0.990726;RPB=0.338386;SGB=12.7003;VDB=0.124831;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V619|801|LOC_Os11g43260|protein_coding|CODING|LOC_Os11g43260.1|5|1) FN1472-S.SNP.11:26103137 chr11:026103137 0 W/26103137-26103137 FN1472-S Single Base Substitution C-G INTRON Homo SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN-187.SNP.11:26108072 chr11:026108072 0 W/26108072-26108072 FN-187 Single Base Substitution C-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN1118-S.SNP.11:26109145 chr11:026109145 0 W/26109145-26109145 FN1118-S Single Base Substitution G-T INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1118-S.SNP.11:26109147 chr11:026109147 0 W/26109147-26109147 FN1118-S Single Base Substitution A-G INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN1619-S.SNP.11:26111212 chr11:026111212 0 W/26111212-26111212 FN1619-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os11g43280 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4129-S.SNP.11:26111829 chr11:026111829 0 W/26111829-26111829 FN4129-S SNP C -> T AC=1;AN=182;BQB=0.909125;DP=2668;DP4=1194,1394,4,4;HOB=6.03792e-05;ICB=0.000121422;MQ=40;MQ0F=0.0262369;MQB=0.00466168;MQSB=0.0755539;RPB=0.150305;SGB=30.5793;VDB=0.0462387;EFF=INTERGENIC(MODIFIER||||||||||1) FN3555-S.SNP.11:26113599 chr11:026113599 0 W/26113599-26113599 FN3555-S SNP A -> T AC=2;AN=188;BQB=0.928997;DP=3903;DP4=1049,2585,13,46;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0999231;MQB=0.425021;MQSB=9.88664e-08;RPB=0.623855;SGB=154.897;VDB=0.258062;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.11:26115187 chr11:026115187 0 W/26115187-26115187 FN2489 SNP A -> G AC=2;AN=200;BQB=0.977845;DP=4217;DP4=1893,1908,22,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000474271;MQB=1.31102e-26;MQSB=0.926719;RPB=0.688611;SGB=105.035;VDB=0.699058;EFF=INTRON(MODIFIER||||1122|LOC_Os11g43290|protein_coding|CODING|LOC_Os11g43290.1|1|1) FN2765-S.SNP.11:26115239 chr11:026115239 0 W/26115239-26115239 FN2765-S SNP T -> C AC=1;AN=196;BQB=0.992327;DP=3846;DP4=1814,1742,15,14;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0;MQB=1.86489e-14;MQSB=0.65952;RPB=0.831079;SGB=26.8957;VDB=0.506874;EFF=INTRON(MODIFIER||||1122|LOC_Os11g43290|protein_coding|CODING|LOC_Os11g43290.1|1|1) FN2390.SNP.11:26116240 chr11:026116240 0 W/26116240-26116240 FN2390 SNP G -> A AC=1;AN=200;BQB=0.952859;DP=4072;DP4=1846,1815,13,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0;MQB=6.55976e-09;MQSB=6.60137e-12;RPB=0.554812;SGB=86.5007;VDB=0.0143065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V266I|1122|LOC_Os11g43290|protein_coding|CODING|LOC_Os11g43290.1|3|1) FN3507-S.SNP.11:26123620 chr11:026123620 0 W/26123620-26123620 FN3507-S SNP G -> T AC=1;AN=188;BQB=0.948801;DP=1503;DP4=1434,32,6,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.6127e-05;MQSB=0.0520214;RPB=0.906668;SGB=26.2637;VDB=0.773058;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A139S|253|LOC_Os11g43300|protein_coding|CODING|LOC_Os11g43300.1|2|1) FN3628-S.SNP.11:26123673 chr11:026123673 0 W/26123673-26123673 FN3628-S SNP C -> T AC=1;AN=190;BQB=0.964698;DP=1351;DP4=1198,104,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000248759;MQSB=0.619402;RPB=0.858617;SGB=30.8803;VDB=0.970307;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A156|253|LOC_Os11g43300|protein_coding|CODING|LOC_Os11g43300.1|2|1) FN2662-S.SNP.11:26124283 chr11:026124283 0 W/26124283-26124283 FN2662-S SNP C -> T AC=1;AN=200;BQB=0.933066;DP=4129;DP4=2097,1761,6,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000484379;MQB=1.49396e-06;MQSB=0.00126235;RPB=0.432791;SGB=33.0593;VDB=0.268133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.11:26129070 chr11:026129070 0 W/26129070-26129070 FN3664-S SNP T -> A AC=1;AN=190;BQB=0.859004;DP=3043;DP4=1551,1349,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.46083e-10;MQSB=0.917281;RPB=0.706079;SGB=62.7569;VDB=0.0195269;EFF=INTERGENIC(MODIFIER||||||||||1) FN3375-S.SNP.11:26129860 chr11:026129860 0 W/26129860-26129860 FN3375-S SNP G -> A AC=1;AN=184;BQB=0.518072;DP=3137;DP4=1406,1606,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.95781e-08;MQSB=0.367019;RPB=0.0255266;SGB=75.8731;VDB=0.295676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.11:26130357 chr11:026130357 0 W/26130357-26130357 FN3415-S SNP T -> A AC=1;AN=184;BQB=0.947364;DP=2759;DP4=1287,1346,1,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.94136e-07;MQSB=0.924018;RPB=0.874149;SGB=32.2261;VDB=0.436305;EFF=INTERGENIC(MODIFIER||||||||||1) FN-59.SNP.11:26133938 chr11:026133938 0 W/26133938-26133938 FN-59 Single Base Substitution A-C INTERGENIC HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1068-S.SNP.11:26134438 chr11:026134438 0 W/26134438-26134438 FN1068-S Single Base Substitution T-G INTERGENIC HOMO SNo: 955, Mutant_ID: FN1068-S, Generation: M2, Mutations: 59, Genes: 45, Seed availability: Yes. FN2107-S.SNP.11:26143494 chr11:026143494 0 W/26143494-26143494 FN2107-S SNP A -> C AC=2;AN=168;BQB=0.207796;DP=3483;DP4=1785,1629,17,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.65944e-17;MQSB=0.967112;RPB=0.358928;SGB=-46.9043;VDB=0.643808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.11:26143661 chr11:026143661 0 W/26143661-26143661 FN3800-S SNP T -> A AC=1;AN=190;BQB=0.8651;DP=2740;DP4=1373,1207,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23456e-10;MQSB=0.875969;RPB=0.927485;SGB=41.5369;VDB=0.41417;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.11:26150586 chr11:026150586 0 W/26150586-26150586 FN3311-S Single Base Substitution A-G INTRON HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN3311-S.SNP.11:26150587 chr11:026150587 0 W/26150587-26150587 FN3311-S Single Base Substitution G-A INTRON HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN4082-S.SNP.11:26174910 chr11:026174910 0 W/26174910-26174910 FN4082-S SNP A -> G AC=1;AN=182;BQB=0.946686;DP=2621;DP4=1229,1305,4,7;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=0.000744553;MQSB=0.0106884;RPB=0.974658;SGB=28.6061;VDB=0.389078;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.11:26175560 chr11:026175560 0 W/26175560-26175560 FN944-S Single Base Substitution A-G INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN1009-S.SNP.11:26178700 chr11:026178700 0 W/26178700-26178700 FN1009-S Single Base Substitution T-C INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. W466-5-1.SNP.11:26194335 chr11:026194335 0 W/26194335-26194335 W466-5-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2097-S.SNP.11:26272734 chr11:026272734 0 W/26272734-26272734 FN2097-S SNP T -> A AC=2;AN=168;BQB=0.960363;DP=3732;DP4=1902,1744,29,31;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0;MQB=9.77565e-08;MQSB=6.88337e-08;RPB=0.762212;SGB=67.1466;VDB=0.685986;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.11:26298561 chr11:026298561 0 W/26298561-26298561 FN1537-S Single Base Substitution G-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN587-S.SNP.11:26299122 chr11:026299122 0 W/26299122-26299122 FN587-S Single Base Substitution A-T INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN587-S.SNP.11:26299124 chr11:026299124 0 W/26299124-26299124 FN587-S Single Base Substitution A-T INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN2281.SNP.11:26301897 chr11:026301897 0 W/26301897-26301897 FN2281 SNP G -> A AC=1;AN=192;BQB=0.998969;DP=4896;DP4=2397,2209,12,19;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=9.67413e-13;MQSB=0.00290999;RPB=0.958779;SGB=64.8148;VDB=0.869933;EFF=INTRON(MODIFIER||||647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.1|5|1),INTRON(MODIFIER||||647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.2|5|1),INTRON(MODIFIER||||647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.3|5|1),INTRON(MODIFIER||||641|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.4|5|1) FN2464.SNP.11:26303009 chr11:026303009 0 W/26303009-26303009 FN2464 SNP G -> C AC=1;AN=200;BQB=0.999915;DP=4857;DP4=2231,2327,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22935e-08;MQSB=0.87944;RPB=0.957371;SGB=36.6644;VDB=0.295253;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G276R|647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G276R|647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.2|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G276R|647|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.3|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G270R|641|LOC_Os11g43590|protein_coding|CODING|LOC_Os11g43590.4|10|1) FN3516-S.SNP.11:26307697 chr11:026307697 0 W/26307697-26307697 FN3516-S SNP G -> A AC=2;AN=188;BQB=0.971065;DP=2073;DP4=883,1121,3,11;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=4.65951e-07;MQSB=3.66421e-08;RPB=0.997667;SGB=39.5276;VDB=0.438147;EFF=INTRON(MODIFIER||||416|LOC_Os11g43600|protein_coding|CODING|LOC_Os11g43600.1|7|1) FN3866-S.SNP.11:26312148 chr11:026312148 0 W/26312148-26312148 FN3866-S SNP G -> A AC=1;AN=158;BQB=0.871075;DP=2478;DP4=1138,1227,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.65101e-07;MQSB=0.942674;RPB=0.34041;SGB=30.704;VDB=0.732755;EFF=INTRON(MODIFIER||||259|LOC_Os11g43610|protein_coding|CODING|LOC_Os11g43610.1|1|1) FN3456-S.SNP.11:26312930 chr11:026312930 0 W/26312930-26312930 FN3456-S SNP C -> T AC=1;AN=184;BQB=0.958356;DP=4090;DP4=1732,2254,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=4.32618e-06;MQSB=0.338003;RPB=0.877846;SGB=32.2261;VDB=0.817036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3456-S.SNP.11:26312934 chr11:026312934 0 W/26312934-26312934 FN3456-S SNP G -> T AC=1;AN=184;BQB=0.946234;DP=4076;DP4=1723,2231,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=7.22586e-05;MQSB=0.320619;RPB=0.920078;SGB=28.7043;VDB=0.585264;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.11:26313663 chr11:026313663 0 W/26313663-26313663 FN3966-S SNP G -> A AC=1;AN=168;BQB=0.518417;DP=2631;DP4=1306,1200,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.11171e-05;MQSB=0.995168;RPB=0.512952;SGB=38.1788;VDB=0.604518;EFF=INTRON(MODIFIER||||85|LOC_Os11g43620|protein_coding|CODING|LOC_Os11g43620.2|1|1),INTRON(MODIFIER||||84|LOC_Os11g43620|protein_coding|CODING|LOC_Os11g43620.1|1|1|WARNING_TRANSCRIPT_NO_START_CODON) FN2631-S.SNP.11:26315175 chr11:026315175 0 W/26315175-26315175 FN2631-S SNP A -> G AC=2;AN=200;BQB=0.962901;DP=5035;DP4=2295,2488,24,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.02206e-33;MQSB=0.988225;RPB=0.942999;SGB=131.087;VDB=0.181372;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.11:26315902 chr11:026315902 0 W/26315902-26315902 FN4063-S SNP G -> A AC=2;AN=168;BQB=0.929404;DP=1314;DP4=104,1162,0,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.86082e-06;MQSB=0.763389;RPB=0.877114;SGB=17.3231;VDB=0.334994;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.11:26316988 chr11:026316988 0 W/26316988-26316988 FN1011-S Single Base Substitution G-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3951-S.SNP.11:26329660 chr11:026329660 0 W/26329660-26329660 FN3951-S SNP A -> G AC=2;AN=168;BQB=0.914234;DP=1168;DP4=437,606,6,8;HOB=0.0235261;ICB=0.494119;MQ=30;MQ0F=0.0684932;MQB=0.807721;MQSB=5.84168e-30;RPB=0.781617;SGB=19.7539;VDB=0.0230487;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.11:26337882 chr11:026337882 0 W/26337882-26337882 FN2790-S SNP C -> A AC=1;AN=198;BQB=0.995927;DP=4402;DP4=1863,2054,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.02497e-11;MQSB=0.971305;RPB=0.907235;SGB=-9.07482;VDB=0.168974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2174-S.SNP.11:26377679 chr11:026377679 0 W/26377679-26377679 FN2174-S SNP G -> A AC=2;AN=168;BQB=0.156215;DP=3157;DP4=1335,1769,17,15;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=7.69725e-10;MQSB=0.0886899;RPB=0.0248327;SGB=-82.1908;VDB=0.575781;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I944|1036|LOC_Os11g43700|protein_coding|CODING|LOC_Os11g43700.1|2|1) FN3803-S.SNP.11:26387192 chr11:026387192 0 W/26387192-26387192 FN3803-S SNP A -> G AC=1;AN=190;BQB=0.833916;DP=2695;DP4=1198,1355,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.66825e-09;MQSB=0.900597;RPB=0.498063;SGB=8.77275;VDB=0.0687241;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.11:26393555 chr11:026393555 0 W/26393555-26393555 FN229-S Single Base Substitution C-A INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2612-S.SNP.11:26404060 chr11:026404060 0 W/26404060-26404060 FN2612-S SNP A -> G AC=2;AN=198;BQB=0.33423;DP=4299;DP4=1919,2147,31,31;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=2.25265e-25;MQSB=0.989337;RPB=0.899124;SGB=238.135;VDB=0.359172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1323-S.SNP.11:26414082 chr11:026414082 0 W/26414082-26414082 FN1323-S Single Base Substitution T-C INTERGENIC HET SNo: 1126, Mutant_ID: FN1323-S, Generation: M2, Mutations: 49, Genes: 35, Seed availability: Yes. FN1682-S.SNP.11:26424943 chr11:026424943 0 W/26424943-26424943 FN1682-S SNP T -> G AC=2;AN=188;BQB=0.266445;DP=3919;DP4=1971,1879,32,23;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=3.75856e-14;MQSB=0.142386;RPB=0.0982924;SGB=244.341;VDB=0.251886;EFF=INTERGENIC(MODIFIER||||||||||1) FN4010-S.SNP.11:26432756 chr11:026432756 0 W/26432756-26432756 FN4010-S SNP G -> T AC=1;AN=168;BQB=0.18714;DP=2905;DP4=1409,1358,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.83785e-05;MQSB=0.997673;RPB=0.0612292;SGB=38.1788;VDB=0.116991;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.11:26445132 chr11:026445132 0 W/26445132-26445132 FN2771-S SNP C -> A AC=1;AN=198;BQB=3.06651e-19;DP=3227;DP4=1663,1238,11,52;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.0102653;MQSB=0.83877;RPB=0.637367;SGB=-896.508;VDB=1.23693e-11;EFF=INTERGENIC(MODIFIER||||||||||1) FN880-S.SNP.11:26445205 chr11:026445205 0 W/26445205-26445205 FN880-S Single Base Substitution A-G INTERGENIC HET SNo: 786, Mutant_ID: FN880-S, Generation: M2, Mutations: 49, Genes: 36, Seed availability: Yes. FN3482-S.SNP.11:26449066 chr11:026449066 0 W/26449066-26449066 FN3482-S SNP C -> T AC=1;AN=184;BQB=0.779024;DP=2795;DP4=1373,1326,13,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00107335;MQB=9.29173e-10;MQSB=0.701055;RPB=0.983297;SGB=89.4385;VDB=0.860519;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.11:26449706 chr11:026449706 0 W/26449706-26449706 FN1357-S Single Base Substitution T-G INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2572-S.SNP.11:26451252 chr11:026451252 0 W/26451252-26451252 FN2572-S SNP G -> A AC=1;AN=198;BQB=0.91075;DP=4150;DP4=2063,1862,12,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.22199e-16;MQSB=0.815372;RPB=0.389783;SGB=150.641;VDB=0.370535;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.11:26472532 chr11:026472532 0 W/26472532-26472532 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.986034;DP=2923;DP4=1263,1561,7,14;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000684229;MQB=1.47557e-09;MQSB=0.00013516;RPB=0.0702356;SGB=90.0802;VDB=0.10775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S8L|425|LOC_Os11g43820|protein_coding|CODING|LOC_Os11g43820.1|2|1) FN2538-S.SNP.11:26475251 chr11:026475251 0 W/26475251-26475251 FN2538-S SNP T -> C AC=1;AN=198;BQB=0.831054;DP=4067;DP4=2129,1680,17,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.41823e-16;MQSB=0.800492;RPB=0.999559;SGB=104.861;VDB=0.682948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2440.SNP.11:26479678 chr11:026479678 0 W/26479678-26479678 FN2440 SNP T -> A AC=2;AN=200;BQB=0.361689;DP=3996;DP4=1352,1958,18,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.99771e-24;MQSB=0.679222;RPB=0.960077;SGB=-45.976;VDB=0.395907;EFF=INTERGENIC(MODIFIER||||||||||1) FN3805-S.SNP.11:26480318 chr11:026480318 0 W/26480318-26480318 FN3805-S SNP T -> A AC=1;AN=190;BQB=0.994781;DP=2574;DP4=1234,1277,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.0844e-06;MQSB=0.937501;RPB=0.0618032;SGB=39.9877;VDB=0.0188917;EFF=INTRON(MODIFIER||||71|LOC_Os11g43840|protein_coding|CODING|LOC_Os11g43840.1|1|1) FN544-S.SNP.11:26484849 chr11:026484849 0 W/26484849-26484849 FN544-S Single Base Substitution C-G INTERGENIC HET SNo: 540, Mutant_ID: FN544-S, Generation: M2, Mutations: 72, Genes: 37, Seed availability: Yes. FN2551-S.SNP.11:26485870 chr11:026485870 0 W/26485870-26485870 FN2551-S SNP C -> T AC=1;AN=198;BQB=0.681359;DP=3755;DP4=1960,1552,6,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.10365e-09;MQSB=0.016724;RPB=0.18181;SGB=37.1297;VDB=0.0784422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2719-S.SNP.11:26487239 chr11:026487239 0 W/26487239-26487239 FN2719-S SNP G -> A AC=2;AN=200;BQB=0.930939;DP=4793;DP4=2325,2238,21,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.08812e-23;MQSB=0.997774;RPB=0.331771;SGB=137.609;VDB=0.827684;EFF=INTERGENIC(MODIFIER||||||||||1) FN463-S.SNP.11:26488069 chr11:026488069 0 W/26488069-26488069 FN463-S Single Base Substitution C-T INTERGENIC HOMO SNo: 462, Mutant_ID: FN463-S, Generation: M2, Mutations: 58, Genes: 53, Seed availability: Yes. FN1648-S.SNP.11:26491992 chr11:026491992 0 W/26491992-26491992 FN1648-S Single Base Substitution T-A INTRON Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN721-S.SNP.11:26496934 chr11:026496934 0 W/26496934-26496934 FN721-S Single Base Substitution C-T INTERGENIC HET SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN690-S.SNP.11:26497752 chr11:026497752 0 W/26497752-26497752 FN690-S Single Base Substitution G-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN4001-S.SNP.11:26501031 chr11:026501031 0 W/26501031-26501031 FN4001-S SNP T -> C AC=1;AN=168;BQB=0.943505;DP=2923;DP4=1407,1406,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.12989e-08;MQSB=0.994528;RPB=0.890512;SGB=34.748;VDB=0.927405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.11:26501494 chr11:026501494 0 W/26501494-26501494 FN2765-S SNP A -> G AC=1;AN=186;BQB=0.980894;DP=4083;DP4=1569,2208,7,12;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.7459e-09;MQSB=0.906773;RPB=0.365372;SGB=81.7147;VDB=0.0837159;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.11:26507524 chr11:026507524 0 W/26507524-26507524 FN2651-S SNP C -> T AC=1;AN=200;BQB=0.315904;DP=4413;DP4=2276,1773,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69794e-18;MQSB=7.22876e-05;RPB=0.501524;SGB=31.9623;VDB=0.402388;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R57H|205|LOC_Os11g43895|protein_coding|CODING|LOC_Os11g43895.1|1|1) FN4119-S.SNP.11:26512735 chr11:026512735 0 W/26512735-26512735 FN4119-S SNP C -> T AC=1;AN=182;BQB=0.922089;DP=3162;DP4=1541,1512,3,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000217003;MQSB=0.811606;RPB=0.121272;SGB=30.5793;VDB=0.655325;EFF=INTRON(MODIFIER||||168|LOC_Os11g43900|protein_coding|CODING|LOC_Os11g43900.1|1|1),INTRON(MODIFIER||||130|LOC_Os11g43900|protein_coding|CODING|LOC_Os11g43900.2|1|1) FN-301.SNP.11:26514158 chr11:026514158 0 W/26514158-26514158 FN-301 Single Base Substitution G-C INTERGENIC HET SNo: 296, Mutant_ID: FN-301, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2408.SNP.11:26515736 chr11:026515736 0 W/26515736-26515736 FN2408 SNP C -> T AC=1;AN=200;BQB=0.99926;DP=4142;DP4=2136,1746,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.1117e-13;MQSB=0.994906;RPB=0.99967;SGB=72.7161;VDB=0.384999;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.11:26523723 chr11:026523723 0 W/26523723-26523723 FN773-S Single Base Substitution A-G INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN1557-S.SNP.11:26527618 chr11:026527618 0 W/26527618-26527618 FN1557-S Single Base Substitution A-G UTR_3_PRIME Homo SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2619-S.SNP.11:26531962 chr11:026531962 0 W/26531962-26531962 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.153672;DP=4319;DP4=2172,1888,21,33;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.14301e-21;MQSB=0.983937;RPB=0.971905;SGB=125.364;VDB=0.189268;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.11:26532652 chr11:026532652 0 W/26532652-26532652 FN456-S Single Base Substitution T-C INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN1109-S.SNP.11:26533732 chr11:026533732 0 W/26533732-26533732 FN1109-S Single Base Substitution C-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN1407-S.SNP.11:26534058 chr11:026534058 0 W/26534058-26534058 FN1407-S Single Base Substitution C-T INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1216-S.SNP.11:26536756 chr11:026536756 0 W/26536756-26536756 FN1216-S Single Base Substitution G-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1216-S.SNP.11:26536757 chr11:026536757 0 W/26536757-26536757 FN1216-S Single Base Substitution G-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1427-S.SNP.11:26543839 chr11:026543839 0 W/26543839-26543839 FN1427-S Single Base Substitution T-C INTRON HET SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN1037-S.SNP.11:26545797 chr11:026545797 0 W/26545797-26545797 FN1037-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g43950 dnaJ domain containing protein, expressed SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN939-S.SNP.11:26547676 chr11:026547676 0 W/26547676-26547676 FN939-S Single Base Substitution C-T INTRON HOMO SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2447.SNP.11:26549409 chr11:026549409 0 W/26549409-26549409 FN2447 SNP T -> C AC=1;AN=200;BQB=0.95838;DP=5212;DP4=2329,2601,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000191865;MQB=6.4653e-10;MQSB=0.957531;RPB=0.0873509;SGB=34.6953;VDB=0.0718132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3464-S.SNP.11:26563864 chr11:026563864 0 W/26563864-26563864 FN3464-S SNP C -> T AC=2;AN=184;BQB=0.501474;DP=3061;DP4=1460,1239,14,7;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0133943;MQB=0.00191482;MQSB=8.99634e-43;RPB=0.638471;SGB=12.8895;VDB=0.0563177;EFF=INTERGENIC(MODIFIER||||||||||1) FN631-S.SNP.11:26565023 chr11:026565023 0 W/26565023-26565023 FN631-S Single Base Substitution A-T INTERGENIC HET SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN783-S.SNP.11:26565023 chr11:026565023 0 W/26565023-26565023 FN783-S Single Base Substitution A-T INTERGENIC HET SNo: 704, Mutant_ID: FN783-S, Generation: M2, Mutations: 36, Genes: 14, Seed availability: Yes. FN2534-S.SNP.11:26577316 chr11:026577316 0 W/26577316-26577316 FN2534-S SNP A -> G AC=1;AN=186;BQB=0.558375;DP=3914;DP4=2085,1633,5,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.42142e-05;MQSB=0.987234;RPB=0.993639;SGB=11.1786;VDB=0.484466;EFF=UTR_3_PRIME(MODIFIER||286||428|LOC_Os11g43990|protein_coding|CODING|LOC_Os11g43990.1|3|1) FN1439-S.SNP.11:26578427 chr11:026578427 0 W/26578427-26578427 FN1439-S Single Base Substitution C-T INTRON HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN3879-S.SNP.11:26583519 chr11:026583519 0 W/26583519-26583519 FN3879-S SNP G -> A AC=1;AN=158;BQB=0.74295;DP=2435;DP4=1023,1264,3,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.14943e-05;MQSB=0.574608;RPB=0.993766;SGB=30.704;VDB=0.92114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3777-S.SNP.11:26591161 chr11:026591161 0 W/26591161-26591161 FN3777-S SNP G -> C AC=1;AN=190;BQB=0.981981;DP=2811;DP4=1216,1531,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.072572;MQB=0.448414;MQSB=1.92032e-25;RPB=0.52289;SGB=35.4339;VDB=0.262384;EFF=INTRON(MODIFIER||||1643|LOC_Os11g44014|protein_coding|CODING|LOC_Os11g44014.1|5|1) FN1048-S.SNP.11:26593779 chr11:026593779 0 W/26593779-26593779 FN1048-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g44014 retrotransposon protein, putative, unclassified, expressed SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN-35.SNP.11:26598328 chr11:026598328 0 W/26598328-26598328 FN-35 Single Base Substitution G-A INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1529-S.SNP.11:26598328 chr11:026598328 0 W/26598328-26598328 FN1529-S Single Base Substitution G-A INTRON HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN1727-S.SNP.11:26600729 chr11:026600729 0 W/26600729-26600729 FN1727-S SNP G -> A AC=1;AN=186;BQB=0.959318;DP=4033;DP4=2109,1877,12,8;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.70934e-12;MQSB=0.754266;RPB=0.994365;SGB=60.7873;VDB=0.0309674;EFF=INTERGENIC(MODIFIER||||||||||1) FN3413-S.SNP.11:26620581 chr11:026620581 0 W/26620581-26620581 FN3413-S SNP C -> T AC=2;AN=184;BQB=0.961341;DP=2828;DP4=1362,1350,10,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.85255e-14;MQSB=0.982239;RPB=0.452259;SGB=93.9603;VDB=0.119206;EFF=INTERGENIC(MODIFIER||||||||||1) FN2255-S.SNP.11:26622827 chr11:026622827 0 W/26622827-26622827 FN2255-S SNP T -> C AC=1;AN=190;BQB=0.647445;DP=5798;DP4=2256,3130,12,5;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0926181;MQB=0.124652;MQSB=0;RPB=0.937238;SGB=28.7675;VDB=0.0579806;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.11:26623013 chr11:026623013 0 W/26623013-26623013 FN955-S Single Base Substitution C-A INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN-166.SNP.11:26623301 chr11:026623301 0 W/26623301-26623301 FN-166 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g44050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2134-S.SNP.11:26629087 chr11:026629087 0 W/26629087-26629087 FN2134-S SNP G -> A AC=1;AN=168;BQB=0.406403;DP=2708;DP4=1354,1333,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00184638;MQB=0.000644528;MQSB=0.699353;RPB=0.95787;SGB=27.8864;VDB=0.574293;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H157Y|1032|LOC_Os11g44060|protein_coding|CODING|LOC_Os11g44060.1|1|1) FN3371-S.SNP.11:26629231 chr11:026629231 0 W/26629231-26629231 FN3371-S SNP T -> C AC=1;AN=184;BQB=0.917253;DP=4153;DP4=1754,2284,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=27;MQ0F=0.288948;MQB=0.64199;MQSB=1.52529e-40;RPB=0.388177;SGB=25.7969;VDB=0.562095;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S109G|1032|LOC_Os11g44060|protein_coding|CODING|LOC_Os11g44060.1|1|1) FN698-S.SNP.11:26633553 chr11:026633553 0 W/26633553-26633553 FN698-S Single Base Substitution C-T INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN514-S.SNP.11:26639967 chr11:026639967 0 W/26639967-26639967 FN514-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g44100 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1337-S.SNP.11:26644664 chr11:026644664 0 W/26644664-26644664 FN1337-S Single Base Substitution G-T INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN4234-S.SNP.11:26645837 chr11:026645837 0 W/26645837-26645837 FN4234-S SNP G -> A AC=2;AN=170;BQB=0.573074;DP=1605;DP4=773,734,6,11;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0.000623053;MQB=6.17949e-08;MQSB=0.591419;RPB=0.91047;SGB=70.0854;VDB=0.175167;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.11:26648068 chr11:026648068 0 W/26648068-26648068 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.0319628;DP=3689;DP4=1343,1554,16,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00141781;MQSB=0.127463;RPB=0.146103;SGB=-135.411;VDB=0.235204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.11:26648816 chr11:026648816 0 W/26648816-26648816 FN1035-S Single Base Substitution C-A INTERGENIC HOMO SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-150.SNP.11:26651605 chr11:026651605 0 W/26651605-26651605 FN-150 Single Base Substitution G-T INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN2401.SNP.11:26652508 chr11:026652508 0 W/26652508-26652508 FN2401 SNP T -> G AC=1;AN=200;BQB=0.941588;DP=4501;DP4=2105,1950,8,15;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0208842;MQB=0.763384;MQSB=0.709007;RPB=0.947811;SGB=100.316;VDB=0.0335533;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgG|R292|1481|LOC_Os11g44150|protein_coding|CODING|LOC_Os11g44150.1|1|1) FN3729-S.SNP.11:26653208 chr11:026653208 0 W/26653208-26653208 FN3729-S SNP G -> A AC=1;AN=190;BQB=0.71252;DP=3049;DP4=1597,1314,12,20;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.117416;MQB=0.129845;MQSB=0.0464764;RPB=0.0305593;SGB=140.173;VDB=0.370139;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A526T|1481|LOC_Os11g44150|protein_coding|CODING|LOC_Os11g44150.1|1|1) FN498-S.SNP.11:26653208 chr11:026653208 0 W/26653208-26653208 FN498-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g44150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN4100-S.SNP.11:26655745 chr11:026655745 0 W/26655745-26655745 FN4100-S SNP G -> T AC=1;AN=182;BQB=0.553902;DP=3150;DP4=1586,1495,9,14;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0174603;MQB=2.03679e-09;MQSB=5.39458e-05;RPB=0.0348573;SGB=70.7363;VDB=0.195723;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctT|L1349|1481|LOC_Os11g44150|protein_coding|CODING|LOC_Os11g44150.1|2|1) FN4100-S.SNP.11:26655750 chr11:026655750 0 W/26655750-26655750 FN4100-S SNP T -> G AC=1;AN=182;BQB=0.998819;DP=3134;DP4=1561,1458,9,14;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0201021;MQB=1.06029e-09;MQSB=4.63636e-05;RPB=0.0384279;SGB=43.231;VDB=0.38647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTa/gGa|V1351G|1481|LOC_Os11g44150|protein_coding|CODING|LOC_Os11g44150.1|2|1) FN3749-S.SNP.11:26656563 chr11:026656563 0 W/26656563-26656563 FN3749-S SNP C -> A AC=2;AN=190;BQB=0.970618;DP=1298;DP4=602,624,6,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.00888e-06;MQSB=0.402139;RPB=0.982664;SGB=49.0954;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN3749-S.SNP.11:26656584 chr11:026656584 0 W/26656584-26656584 FN3749-S SNP G -> A AC=2;AN=190;BQB=0.595873;DP=1312;DP4=610,608,6,6;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=8.01012e-07;MQSB=0.718492;RPB=0.140029;SGB=49.0954;VDB=0.652509;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.11:26659917 chr11:026659917 0 W/26659917-26659917 FN944-S Single Base Substitution G-T INTERGENIC HET SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN2128-S.SNP.11:26664240 chr11:026664240 0 W/26664240-26664240 FN2128-S SNP G -> A AC=2;AN=168;BQB=0.990472;DP=2499;DP4=854,1567,11,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.64977e-14;MQSB=0.983309;RPB=0.990989;SGB=-45.1967;VDB=0.724389;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.11:26664619 chr11:026664619 0 W/26664619-26664619 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN589-S.SNP.11:26670244 chr11:026670244 0 W/26670244-26670244 FN589-S Single Base Substitution G-C INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN1540-S.SNP.11:26671416 chr11:026671416 0 W/26671416-26671416 FN1540-S Single Base Substitution G-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN455-S.SNP.11:26671416 chr11:026671416 0 W/26671416-26671416 FN455-S Single Base Substitution G-A INTERGENIC HET SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1741-S.SNP.11:26686658 chr11:026686658 0 W/26686658-26686658 FN1741-S SNP C -> T AC=2;AN=188;BQB=0.912053;DP=3807;DP4=2003,1747,22,23;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000262674;MQB=1.28044e-12;MQSB=0.0175084;RPB=0.641296;SGB=50.2938;VDB=0.89906;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V191|801|LOC_Os11g44180|protein_coding|CODING|LOC_Os11g44180.1|1|1) FN478-S.SNP.11:26686664 chr11:026686664 0 W/26686664-26686664 FN478-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-277.SNP.11:26698469 chr11:026698469 0 W/26698469-26698469 FN-277 Single Base Substitution T-C INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN2618-S.SNP.11:26712618 chr11:026712618 0 W/26712618-26712618 FN2618-S SNP C -> T AC=1;AN=186;BQB=0.973951;DP=4100;DP4=1932,1862,10,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.59946e-13;MQSB=0.999981;RPB=0.944309;SGB=90.9049;VDB=0.97717;EFF=INTERGENIC(MODIFIER||||||||||1) FN3575-S.SNP.11:26716993 chr11:026716993 0 W/26716993-26716993 FN3575-S SNP G -> A AC=1;AN=188;BQB=0.988306;DP=2521;DP4=1256,1212,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.14706e-06;MQSB=0.910955;RPB=0.934471;SGB=35.3493;VDB=0.349492;EFF=INTERGENIC(MODIFIER||||||||||1) FN745-S.SNP.11:26717911 chr11:026717911 0 W/26717911-26717911 FN745-S Single Base Substitution C-G INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN3479-S.SNP.11:26718397 chr11:026718397 0 W/26718397-26718397 FN3479-S SNP G -> A AC=1;AN=184;BQB=0.844137;DP=3776;DP4=2276,1381,13,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.56753e-14;MQSB=0.772831;RPB=0.846806;SGB=53.5365;VDB=0.986792;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.11:26719842 chr11:026719842 0 W/26719842-26719842 FN-174 Single Base Substitution T-A INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-174.SNP.11:26719847 chr11:026719847 0 W/26719847-26719847 FN-174 Single Base Substitution C-T INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-174.SNP.11:26719853 chr11:026719853 0 W/26719853-26719853 FN-174 Single Base Substitution G-C INTERGENIC HOMO SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN1725-S.SNP.11:26720042 chr11:026720042 0 W/26720042-26720042 FN1725-S SNP G -> A AC=2;AN=188;BQB=0.516318;DP=4257;DP4=2132,2030,29,37;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.01833e-31;MQSB=0.975075;RPB=0.958746;SGB=26.1203;VDB=0.00418414;EFF=INTERGENIC(MODIFIER||||||||||1) FN2366.SNP.11:26722393 chr11:026722393 0 W/26722393-26722393 FN2366 SNP T -> C AC=2;AN=192;BQB=0.97826;DP=4771;DP4=2661,1876,28,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.44834e-29;MQSB=0.716492;RPB=0.326468;SGB=236.349;VDB=0.380049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.11:26724172 chr11:026724172 0 W/26724172-26724172 FN2467 SNP C -> T AC=1;AN=200;BQB=0.775322;DP=4404;DP4=2230,1972,12,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.87469e-07;MQSB=0.802619;RPB=0.86994;SGB=47.4799;VDB=0.997648;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I85|350|LOC_Os11g44230|protein_coding|CODING|LOC_Os11g44230.1|1|1) FN2619-S.SNP.11:26726590 chr11:026726590 0 W/26726590-26726590 FN2619-S SNP T -> A AC=1;AN=188;BQB=0.975119;DP=3203;DP4=1826,1145,19,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.25616e-18;MQSB=0.9918;RPB=0.941729;SGB=127.666;VDB=0.286953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2713-S.SNP.11:26732938 chr11:026732938 0 W/26732938-26732938 FN2713-S SNP G -> T AC=2;AN=200;BQB=0.986306;DP=4679;DP4=1966,2499,22,19;HOB=0.0198;ICB=0.495051;MQ=35;MQ0F=0.151528;MQB=0.0572757;MQSB=0.2829;RPB=0.874379;SGB=183.209;VDB=0.544203;EFF=INTRON(MODIFIER||||1905|LOC_Os11g44240|protein_coding|CODING|LOC_Os11g44240.1|2|1) FN373-S.SNP.11:26736775 chr11:026736775 0 W/26736775-26736775 FN373-S Single Base Substitution C-T INTRON HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN3581-S.SNP.11:26740006 chr11:026740006 0 W/26740006-26740006 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.325961;DP=2776;DP4=1386,1286,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.33288e-05;MQSB=0.417662;RPB=0.590959;SGB=21.1058;VDB=0.605471;EFF=INTERGENIC(MODIFIER||||||||||1) FN550-S.SNP.11:26742360 chr11:026742360 0 W/26742360-26742360 FN550-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os11g44250 protein kinase, putative, expressed SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN2750-S.SNP.11:26748815 chr11:026748815 0 W/26748815-26748815 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.889242;DP=4913;DP4=2277,2352,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000407083;MQB=5.19823e-15;MQSB=0.793126;RPB=0.932476;SGB=19.1209;VDB=0.526122;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.11:26757239 chr11:026757239 0 W/26757239-26757239 FN1118-S Single Base Substitution T-C INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2108-S.SNP.11:26759493 chr11:026759493 0 W/26759493-26759493 FN2108-S SNP G -> C AC=1;AN=168;BQB=0.0587947;DP=2801;DP4=1136,1628,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000125058;MQSB=0.999906;RPB=0.204175;SGB=-36.0898;VDB=0.740498;EFF=INTRON(MODIFIER||||113|LOC_Os11g44270|protein_coding|CODING|LOC_Os11g44270.1|1|1) FN3784-S.SNP.11:26765681 chr11:026765681 0 W/26765681-26765681 FN3784-S SNP C -> T AC=1;AN=190;BQB=0.982779;DP=2958;DP4=1513,1329,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.30433e-05;MQSB=0.982643;RPB=0.709853;SGB=25.439;VDB=0.940371;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.11:26772812 chr11:026772812 0 W/26772812-26772812 FN1152-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN-374.SNP.11:26773290 chr11:026773290 0 W/26773290-26773290 FN-374 Single Base Substitution G-A INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN3541-S.SNP.11:26775012 chr11:026775012 0 W/26775012-26775012 FN3541-S SNP G -> A AC=1;AN=188;BQB=0.776291;DP=2963;DP4=1221,1643,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.94556e-05;MQSB=0.295987;RPB=0.966575;SGB=28.8977;VDB=0.081933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R22C|240|LOC_Os11g44300|protein_coding|CODING|LOC_Os11g44300.1|1|1) FN1056-S.SNP.11:26777790 chr11:026777790 0 W/26777790-26777790 FN1056-S Single Base Substitution G-A INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN4120-S.SNP.11:26784524 chr11:026784524 0 W/26784524-26784524 FN4120-S SNP G -> C AC=1;AN=182;BQB=0.736472;DP=3105;DP4=1473,1541,9,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.97186e-10;MQSB=0.977871;RPB=0.999047;SGB=60.2037;VDB=0.816543;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.11:26788099 chr11:026788099 0 W/26788099-26788099 FN3967-S SNP C -> T AC=1;AN=182;BQB=0.960735;DP=2864;DP4=1291,1437,13,19;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.38482e-20;MQSB=0.754774;RPB=0.82327;SGB=65.8287;VDB=0.354194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.11:26788100 chr11:026788100 0 W/26788100-26788100 FN3967-S SNP A -> T AC=1;AN=182;BQB=0.98669;DP=2858;DP4=1270,1491,14,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.55941e-20;MQSB=0.731875;RPB=0.533996;SGB=102.334;VDB=0.436213;EFF=INTERGENIC(MODIFIER||||||||||1) FN969-S.SNP.11:26798485 chr11:026798485 0 W/26798485-26798485 FN969-S Single Base Substitution G-A SPLICE_SITE_DONOR HET LOC_Os11g44340 calmodulin binding protein, putative, expressed SNo: 873, Mutant_ID: FN969-S, Generation: M2, Mutations: 48, Genes: 15, Seed availability: Yes. FN_546-3-1.SNP.11:26801964 chr11:026801964 0 W/26801964-26801964 FN_546-3-1 Single Base Substitution G-A HET LOC_Os11g44340 calmodulin binding protein, putative, expressed SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN4258-S.SNP.11:26803100 chr11:026803100 0 W/26803100-26803100 FN4258-S SNP A -> G AC=1;AN=170;BQB=0.811442;DP=2464;DP4=1075,1283,5,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.27488e-10;MQSB=0.970856;RPB=0.864143;SGB=41.7633;VDB=0.326706;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.11:26814340 chr11:026814340 0 W/26814340-26814340 FN3422-S SNP T -> A AC=1;AN=184;BQB=0.640481;DP=2928;DP4=1530,1218,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000403531;MQSB=0.893272;RPB=0.312613;SGB=-2.32838;VDB=0.488367;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.11:26824125 chr11:026824125 0 W/26824125-26824125 FN1423-S Single Base Substitution G-C INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-152.SNP.11:26830632 chr11:026830632 0 W/26830632-26830632 FN-152 Single Base Substitution C-T INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN1445-S.SNP.11:26833850 chr11:026833850 0 W/26833850-26833850 FN1445-S Single Base Substitution G-C INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2477.SNP.11:26837501 chr11:026837501 0 W/26837501-26837501 FN2477 SNP T -> C AC=1;AN=200;BQB=0.970495;DP=5377;DP4=2544,2415,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69274e-05;MQSB=0.772504;RPB=0.977326;SGB=19.0642;VDB=0.749574;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.11:26838000 chr11:026838000 0 W/26838000-26838000 FN2136-S SNP C -> T AC=1;AN=168;BQB=4.851e-05;DP=3690;DP4=2000,1641,18,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.43786e-11;MQSB=0.897114;RPB=0.0471354;SGB=-323.447;VDB=0.152856;EFF=INTERGENIC(MODIFIER||||||||||1) FN2785-S.SNP.11:26845765 chr11:026845765 0 W/26845765-26845765 FN2785-S SNP C -> T AC=1;AN=198;BQB=0.455825;DP=3522;DP4=1719,1597,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00255537;MQB=3.20814e-05;MQSB=1.48224e-06;RPB=0.646631;SGB=104.69;VDB=0.716835;EFF=INTRON(MODIFIER||||683|LOC_Os11g44390|protein_coding|CODING|LOC_Os11g44390.1|5|1) FN739-S.SNP.11:26850045 chr11:026850045 0 W/26850045-26850045 FN739-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2539-S.SNP.11:26851579 chr11:026851579 0 W/26851579-26851579 FN2539-S SNP A -> G AC=1;AN=198;BQB=0.999456;DP=3711;DP4=1791,1674,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.30667e-05;MQSB=0.896064;RPB=0.918984;SGB=49.5489;VDB=0.559446;EFF=INTRON(MODIFIER||||683|LOC_Os11g44390|protein_coding|CODING|LOC_Os11g44390.1|1|1) FN_822-5-1.SNP.11:26852012 chr11:026852012 0 W/26852012-26852012 FN_822-5-1 Single Base Substitution A-C HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN4050-S.SNP.11:26862940 chr11:026862940 0 W/26862940-26862940 FN4050-S SNP A -> T AC=2;AN=166;BQB=0.970334;DP=824;DP4=540,134,8,4;HOB=0.0238061;ICB=0.494049;MQ=47;MQ0F=0.00364078;MQB=0.0070849;MQSB=0.000576884;RPB=0.999939;SGB=25.683;VDB=0.000370466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2467.SNP.11:26872435 chr11:026872435 0 W/26872435-26872435 FN2467 SNP G -> A AC=1;AN=200;BQB=0.906412;DP=3506;DP4=1716,1457,7,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000855676;MQB=5.01994e-05;MQSB=6.28029e-09;RPB=0.790528;SGB=49.6594;VDB=0.489788;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.11:26880260 chr11:026880260 0 W/26880260-26880260 FN3968-S SNP A -> G AC=1;AN=168;BQB=0.977305;DP=2572;DP4=1136,1275,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.61313e-07;MQSB=0.406097;RPB=0.946976;SGB=31.3172;VDB=0.905193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3472-S.SNP.11:26880375 chr11:026880375 0 W/26880375-26880375 FN3472-S SNP G -> C AC=1;AN=184;BQB=0.970783;DP=3050;DP4=1477,1490,12,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.21733e-09;MQSB=0.904088;RPB=0.93916;SGB=62.3078;VDB=0.125803;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.11:26880430 chr11:026880430 0 W/26880430-26880430 FN-262 Single Base Substitution C-T INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3283-S.SNP.11:26900747 chr11:026900747 0 W/26900747-26900747 FN3283-S SNP A -> C AC=1;AN=184;BQB=0.960591;DP=3301;DP4=1614,1515,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.66592e-11;MQSB=0.995298;RPB=0.52835;SGB=53.3568;VDB=0.570312;EFF=INTERGENIC(MODIFIER||||||||||1) FN3720-S.SNP.11:26903977 chr11:026903977 0 W/26903977-26903977 FN3720-S SNP A -> C AC=1;AN=190;BQB=0.929768;DP=2986;DP4=1608,1263,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.00686e-05;MQSB=0.999955;RPB=0.887142;SGB=30.8803;VDB=0.121126;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.11:26915499 chr11:026915499 0 W/26915499-26915499 FN763-S Single Base Substitution T-C INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2540-S.SNP.11:26917545 chr11:026917545 0 W/26917545-26917545 FN2540-S SNP G -> A AC=1;AN=198;BQB=0.237606;DP=3800;DP4=1805,1770,3,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.33245e-06;MQSB=0.943923;RPB=0.994148;SGB=63.3342;VDB=0.241276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V301M|580|LOC_Os11g44500|protein_coding|CODING|LOC_Os11g44500.1|2|1) FN753-S.SNP.11:26919900 chr11:026919900 0 W/26919900-26919900 FN753-S Single Base Substitution G-A INTERGENIC HOMO SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN4036-S.SNP.11:26921335 chr11:026921335 0 W/26921335-26921335 FN4036-S SNP C -> G AC=1;AN=168;BQB=0.860657;DP=2857;DP4=1582,1196,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.1167e-08;MQSB=0.992306;RPB=0.950517;SGB=17.3231;VDB=0.45262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.11:26923261 chr11:026923261 0 W/26923261-26923261 FN1214-S Single Base Substitution C-A INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2108-S.SNP.11:26926764 chr11:026926764 0 W/26926764-26926764 FN2108-S SNP G -> A AC=1;AN=168;BQB=0.0130191;DP=5756;DP4=2662,3052,19,7;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.218555;MQB=0.104951;MQSB=0;RPB=0.99651;SGB=-164.05;VDB=0.156826;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L999|1407|LOC_Os11g44530|protein_coding|CODING|LOC_Os11g44530.1|2|1) FN-311.SNP.11:26930537 chr11:026930537 0 W/26930537-26930537 FN-311 Single Base Substitution G-A INTRON HET SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN2612-S.SNP.11:26930704 chr11:026930704 0 W/26930704-26930704 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.999596;DP=3302;DP4=1580,1355,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000302847;MQB=2.21172e-08;MQSB=0.150852;RPB=0.220973;SGB=43.7442;VDB=0.123351;EFF=INTRON(MODIFIER||||1407|LOC_Os11g44530|protein_coding|CODING|LOC_Os11g44530.1|1|1) FN3824-S.SNP.11:26931541 chr11:026931541 0 W/26931541-26931541 FN3824-S SNP C -> T AC=1;AN=188;BQB=0.783658;DP=2391;DP4=1269,1051,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.02133;MQB=0.915807;MQSB=0.191954;RPB=0.034532;SGB=28.9929;VDB=0.614683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.11:26932200 chr11:026932200 0 W/26932200-26932200 FN2711-S SNP G -> A AC=1;AN=200;BQB=0.87792;DP=4931;DP4=2433,2272,13,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85479e-11;MQSB=0.998166;RPB=0.823446;SGB=37.3004;VDB=0.559358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.11:26933441 chr11:026933441 0 W/26933441-26933441 FN3909-S SNP G -> A AC=1;AN=158;BQB=0.972486;DP=2473;DP4=1387,992,16,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.33182e-09;MQSB=0.997501;RPB=0.485023;SGB=50.9207;VDB=0.638457;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.11:26934187 chr11:026934187 0 W/26934187-26934187 FN3681-S SNP G -> A AC=2;AN=190;BQB=0.97488;DP=1329;DP4=873,336,10,7;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.000752445;MQB=1.20981e-05;MQSB=3.06971e-08;RPB=0.715987;SGB=71.8647;VDB=0.818024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G7R|305|LOC_Os11g44550|protein_coding|CODING|LOC_Os11g44550.1|1|1) FN1665-S.SNP.11:26954608 chr11:026954608 0 W/26954608-26954608 FN1665-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os11g44580 go35 NBS-LRR, putative, expressed SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1310-S.SNP.11:26959816 chr11:026959816 0 W/26959816-26959816 FN1310-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2677-S.SNP.11:26961797 chr11:026961797 0 W/26961797-26961797 FN2677-S SNP G -> T AC=1;AN=200;BQB=0.471317;DP=4825;DP4=2303,2303,9,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.95146e-07;MQSB=0.874992;RPB=0.761855;SGB=33.0593;VDB=0.348487;EFF=INTRON(MODIFIER||||232|LOC_Os11g44590|protein_coding|CODING|LOC_Os11g44590.1|1|1) FN4142-S.SNP.11:26963654 chr11:026963654 0 W/26963654-26963654 FN4142-S SNP A -> T AC=1;AN=170;BQB=0.337021;DP=2521;DP4=1232,1241,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.85142e-07;MQSB=0.999888;RPB=0.964147;SGB=19.8839;VDB=0.774158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1295-S.SNP.11:26968419 chr11:026968419 0 W/26968419-26968419 FN1295-S Single Base Substitution C-G INTRON HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN1732-S.SNP.11:26968522 chr11:026968522 0 W/26968522-26968522 FN1732-S SNP C -> T AC=1;AN=188;BQB=0.615329;DP=2376;DP4=948,1366,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00659191;MQSB=0.000519267;RPB=0.560531;SGB=-17.7162;VDB=0.113567;EFF=INTRON(MODIFIER||||589|LOC_Os11g44600|protein_coding|CODING|LOC_Os11g44600.1|2|1) FN2631-S.SNP.11:26981857 chr11:026981857 0 W/26981857-26981857 FN2631-S SNP C -> G AC=1;AN=200;BQB=0.0486706;DP=4319;DP4=2021,1978,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00162075;MQB=3.9729e-09;MQSB=0.745026;RPB=0.999982;SGB=63.4749;VDB=0.179528;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.11:26982452 chr11:026982452 0 W/26982452-26982452 FN-191 Single Base Substitution T-A INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3852-S.SNP.11:26982762 chr11:026982762 0 W/26982762-26982762 FN3852-S SNP A -> G AC=1;AN=158;BQB=0.974482;DP=2314;DP4=1158,1063,9,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.24317e-10;MQSB=0.626064;RPB=0.435459;SGB=68.9144;VDB=0.590846;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.11:26983298 chr11:026983298 0 W/26983298-26983298 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.988732;DP=2491;DP4=1334,1065,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.85221e-08;MQSB=0.908507;RPB=0.786733;SGB=53.2642;VDB=0.836523;EFF=INTRON(MODIFIER||||376|LOC_Os11g44630|protein_coding|CODING|LOC_Os11g44630.1|4|1) FN1430-S.SNP.11:26987705 chr11:026987705 0 W/26987705-26987705 FN1430-S Single Base Substitution T-G INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2451.SNP.11:26995241 chr11:026995241 0 W/26995241-26995241 FN2451 SNP G -> A AC=1;AN=200;BQB=0.999311;DP=1582;DP4=1167,314,11,2;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=0.000345094;MQSB=0.00584935;RPB=0.907982;SGB=54.2646;VDB=0.697825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.11:26996234 chr11:026996234 0 W/26996234-26996234 FN1423-S Single Base Substitution G-C INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN710-S.SNP.11:26998036 chr11:026998036 0 W/26998036-26998036 FN710-S Single Base Substitution A-G INTERGENIC HET SNo: 639, Mutant_ID: FN710-S, Generation: M2, Mutations: 46, Genes: 16, Seed availability: Yes. FN987-S.SNP.11:26999539 chr11:026999539 0 W/26999539-26999539 FN987-S Single Base Substitution C-T INTERGENIC HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN3471-S.SNP.11:27010541 chr11:027010541 0 W/27010541-27010541 FN3471-S SNP C -> T AC=2;AN=184;BQB=0.816534;DP=3314;DP4=1562,1471,104,53;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.0359083;MQB=0;MQSB=5.42729e-06;RPB=3.42955e-22;SGB=-1756.48;VDB=6.99112e-19;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.11:27015013 chr11:027015013 0 W/27015013-27015013 FN4032-S SNP A -> G AC=1;AN=168;BQB=0.983216;DP=2576;DP4=1159,1307,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86189e-08;MQSB=0.702298;RPB=0.948912;SGB=27.0464;VDB=0.0708308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.11:27017553 chr11:027017553 0 W/27017553-27017553 FN1162-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g44680 calmodulin binding protein, putative, expressed SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN2242-S.SNP.11:27018150 chr11:027018150 0 W/27018150-27018150 FN2242-S SNP G -> A AC=2;AN=190;BQB=0.994653;DP=4729;DP4=2063,2422,22,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000211461;MQB=8.05548e-21;MQSB=0.994296;RPB=0.269883;SGB=128.501;VDB=0.976132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A201T|618|LOC_Os11g44680|protein_coding|CODING|LOC_Os11g44680.1|6|1) FN1089-S.SNP.11:27019946 chr11:027019946 0 W/27019946-27019946 FN1089-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g44680 calmodulin binding protein, putative, expressed SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN940-S.SNP.11:27030580 chr11:027030580 0 W/27030580-27030580 FN940-S Single Base Substitution T-G INTRON HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2375.SNP.11:27032444 chr11:027032444 0 W/27032444-27032444 FN2375 SNP G -> A AC=1;AN=192;BQB=0.973036;DP=4657;DP4=2043,2278,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000429461;MQB=5.688e-06;MQSB=0.0535037;RPB=0.443334;SGB=50.4731;VDB=0.0383152;EFF=INTRON(MODIFIER||||385|LOC_Os11g44700|protein_coding|CODING|LOC_Os11g44700.1|6|1) FN2706-S.SNP.11:27032811 chr11:027032811 0 W/27032811-27032811 FN2706-S SNP C -> T AC=1;AN=200;BQB=0.298204;DP=3831;DP4=1779,1844,3,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00429418;MQSB=0.220427;RPB=0.851569;SGB=31.2392;VDB=0.251998;EFF=INTRON(MODIFIER||||385|LOC_Os11g44700|protein_coding|CODING|LOC_Os11g44700.1|6|1) FN-198.SNP.11:27038164 chr11:027038164 0 W/27038164-27038164 FN-198 Single Base Substitution G-T INTERGENIC HET SNo: 198, Mutant_ID: FN-198, Generation: M2, Mutations: 65, Genes: 38, Seed availability: Yes. FN524-S.SNP.11:27048225 chr11:027048225 0 W/27048225-27048225 FN524-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g44710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1494-S.SNP.11:27057130 chr11:027057130 0 W/27057130-27057130 FN1494-S Single Base Substitution T-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1494-S.SNP.11:27057131 chr11:027057131 0 W/27057131-27057131 FN1494-S Single Base Substitution C-A INTERGENIC HET SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3552-S.SNP.11:27079163 chr11:027079163 0 W/27079163-27079163 FN3552-S SNP T -> C AC=1;AN=188;BQB=0.896631;DP=2572;DP4=1277,1221,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000181348;MQSB=0.998617;RPB=0.991179;SGB=30.8063;VDB=0.231522;EFF=INTRON(MODIFIER||||2776|LOC_Os11g44750|protein_coding|CODING|LOC_Os11g44750.1|2|1) FN2530-S.SNP.11:27094790 chr11:027094790 0 W/27094790-27094790 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.641686;DP=5055;DP4=2587,2221,9,12;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0953511;MQB=0.953236;MQSB=0.000747046;RPB=0.681244;SGB=90.9049;VDB=0.408311;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W1732*|1980|LOC_Os11g44770|protein_coding|CODING|LOC_Os11g44770.1|1|1) FN906-S.SNP.11:27094813 chr11:027094813 0 W/27094813-27094813 FN906-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os11g44770 retrotransposon protein, putative, unclassified, expressed SNo: 812, Mutant_ID: FN906-S, Generation: M2, Mutations: 47, Genes: 19, Seed availability: Yes. FN3720-S.SNP.11:27099115 chr11:027099115 0 W/27099115-27099115 FN3720-S SNP G -> A AC=1;AN=190;BQB=0.999611;DP=3087;DP4=1381,1577,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.000323939;MQB=0.104825;MQSB=2.21463e-08;RPB=0.763516;SGB=62.7569;VDB=0.898922;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q291*|1980|LOC_Os11g44770|protein_coding|CODING|LOC_Os11g44770.1|1|1) FN2539-S.SNP.11:27105300 chr11:027105300 0 W/27105300-27105300 FN2539-S SNP C -> G AC=1;AN=198;BQB=0.658927;DP=8080;DP4=3740,4062,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=27;MQ0F=0.187624;MQB=0.21013;MQSB=0;RPB=0.296522;SGB=54.5295;VDB=0.393492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.11:27106521 chr11:027106521 0 W/27106521-27106521 FN2637-S SNP C -> A AC=1;AN=200;BQB=0.988819;DP=5048;DP4=2346,2438,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31034e-08;MQSB=0.952616;RPB=0.317585;SGB=7.88476;VDB=0.835487;EFF=INTRON(MODIFIER||||276|LOC_Os11g44790|protein_coding|CODING|LOC_Os11g44790.1|3|1) FN-402.SNP.11:27107655 chr11:027107655 0 W/27107655-27107655 FN-402 Single Base Substitution C-A INTRON HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN-299.SNP.11:27111562 chr11:027111562 0 W/27111562-27111562 FN-299 Single Base Substitution T-G INTERGENIC HOMO SNo: 294, Mutant_ID: FN-299, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN479-S.SNP.11:27115684 chr11:027115684 0 W/27115684-27115684 FN479-S Single Base Substitution G-A INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-177.SNP.11:27124282 chr11:027124282 0 W/27124282-27124282 FN-177 Single Base Substitution C-T INTERGENIC HET SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN890-S.SNP.11:27125596 chr11:027125596 0 W/27125596-27125596 FN890-S Single Base Substitution A-T INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN621-S.SNP.11:27141253 chr11:027141253 0 W/27141253-27141253 FN621-S Single Base Substitution C-T INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN445-S.SNP.11:27141597 chr11:027141597 0 W/27141597-27141597 FN445-S Single Base Substitution C-T INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN788-S.SNP.11:27142444 chr11:027142444 0 W/27142444-27142444 FN788-S Single Base Substitution G-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN788-S.SNP.11:27142445 chr11:027142445 0 W/27142445-27142445 FN788-S Single Base Substitution C-A INTERGENIC HET SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1573-S.SNP.11:27154975 chr11:027154975 0 W/27154975-27154975 FN1573-S Single Base Substitution G-C INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1436-S.SNP.11:27156059 chr11:027156059 0 W/27156059-27156059 FN1436-S Single Base Substitution G-A INTRON HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN-308.SNP.11:27156697 chr11:027156697 0 W/27156697-27156697 FN-308 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN1716-S.SNP.11:27161207 chr11:027161207 0 W/27161207-27161207 FN1716-S SNP C -> T AC=2;AN=188;BQB=0.790939;DP=4009;DP4=1937,2002,24,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.21412e-25;MQSB=0.997738;RPB=0.823645;SGB=4.55885;VDB=0.103649;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L525|1005|LOC_Os11g44880|protein_coding|CODING|LOC_Os11g44880.1|13|1) FN2356.SNP.11:27166451 chr11:027166451 0 W/27166451-27166451 FN2356 SNP C -> A AC=1;AN=192;BQB=0.993872;DP=5186;DP4=2452,2452,22,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.99898e-20;MQSB=0.915321;RPB=0.640829;SGB=-4.04606;VDB=0.534627;EFF=INTERGENIC(MODIFIER||||||||||1) FN4051-S.SNP.11:27170990 chr11:027170990 0 W/27170990-27170990 FN4051-S SNP G -> A AC=1;AN=168;BQB=0.368693;DP=1813;DP4=1009,694,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0165472;MQB=0.000217922;MQSB=0.0612408;RPB=0.974948;SGB=5.62151;VDB=0.116089;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.11:27178687 chr11:027178687 0 W/27178687-27178687 FN780-S Single Base Substitution C-G INTERGENIC HOMO SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN1162-S.SNP.11:27187255 chr11:027187255 0 W/27187255-27187255 FN1162-S Single Base Substitution C-T INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN4151-S.SNP.11:27187882 chr11:027187882 0 W/27187882-27187882 FN4151-S SNP C -> A AC=1;AN=170;BQB=0.992027;DP=2861;DP4=1414,1356,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.05069e-08;MQSB=0.99993;RPB=0.863379;SGB=61.2001;VDB=0.445855;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.11:27190142 chr11:027190142 0 W/27190142-27190142 FN-94 Single Base Substitution T-C INTERGENIC HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN849-S.SNP.11:27192193 chr11:027192193 0 W/27192193-27192193 FN849-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os11g44920 expressed protein SNo: 755, Mutant_ID: FN849-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN2656-S.SNP.11:27195885 chr11:027195885 0 W/27195885-27195885 FN2656-S SNP T -> A AC=2;AN=200;BQB=0.616369;DP=5145;DP4=2287,2518,35,37;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.97373e-37;MQSB=0.976284;RPB=0.755443;SGB=239.182;VDB=0.761328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3601-S.SNP.11:27195887 chr11:027195887 0 W/27195887-27195887 FN3601-S SNP A -> G AC=1;AN=190;BQB=0.972597;DP=2843;DP4=1335,1413,2,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55922e-11;MQSB=0.82241;RPB=0.983707;SGB=60.9777;VDB=0.462817;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.11:27207021 chr11:027207021 0 W/27207021-27207021 FN2448 SNP T -> G AC=1;AN=200;BQB=0.861093;DP=5092;DP4=1975,2638,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78815e-12;MQSB=0.974408;RPB=0.54418;SGB=15.9106;VDB=0.90356;EFF=INTRON(MODIFIER||||790|LOC_Os11g44950|protein_coding|CODING|LOC_Os11g44950.2|1|1),INTRON(MODIFIER||||664|LOC_Os11g44950|protein_coding|CODING|LOC_Os11g44950.1|1|1) FN542-S.SNP.11:27207284 chr11:027207284 0 W/27207284-27207284 FN542-S Single Base Substitution G-T INTRON HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1249-S.SNP.11:27210721 chr11:027210721 0 W/27210721-27210721 FN1249-S Single Base Substitution G-C INTERGENIC HET SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN-366.SNP.11:27223615 chr11:027223615 0 W/27223615-27223615 FN-366 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 355, Mutant_ID: FN-366, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-181.SNP.11:27227555 chr11:027227555 0 W/27227555-27227555 FN-181 Single Base Substitution C-T INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3522-S.SNP.11:27227877 chr11:027227877 0 W/27227877-27227877 FN3522-S SNP G -> A AC=2;AN=188;BQB=0.990473;DP=3471;DP4=1513,1896,10,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.70226e-12;MQSB=0.976614;RPB=0.652253;SGB=89.8686;VDB=0.125533;EFF=INTERGENIC(MODIFIER||||||||||1) FN-32.SNP.11:27233370 chr11:027233370 0 W/27233370-27233370 FN-32 Single Base Substitution A-T INTERGENIC Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN-76.SNP.11:27238381 chr11:027238381 0 W/27238381-27238381 FN-76 Single Base Substitution C-T INTRON HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN3846-S.SNP.11:27240913 chr11:027240913 0 W/27240913-27240913 FN3846-S SNP T -> C AC=1;AN=190;BQB=0.981961;DP=2359;DP4=1128,1161,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=0.00668688;MQSB=0.000227722;RPB=0.976834;SGB=49.0954;VDB=0.519344;EFF=INTERGENIC(MODIFIER||||||||||1) FN-295.SNP.11:27243606 chr11:027243606 0 W/27243606-27243606 FN-295 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os11g44990 NB-ARC domain containing protein, expressed SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN_827-1.SNP.11:27252266 chr11:027252266 0 W/27252266-27252266 FN_827-1 Single Base Substitution C-T HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2780-S.SNP.11:27256406 chr11:027256406 0 W/27256406-27256406 FN2780-S SNP A -> G AC=1;AN=198;BQB=0.814274;DP=3773;DP4=1618,1840,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0121919;MQB=0.0423991;MQSB=0.361147;RPB=0.879573;SGB=79.6954;VDB=0.450193;EFF=INTERGENIC(MODIFIER||||||||||1) FN818-S.SNP.11:27258291 chr11:027258291 0 W/27258291-27258291 FN818-S Single Base Substitution G-T INTERGENIC HOMO SNo: 735, Mutant_ID: FN818-S, Generation: M2, Mutations: 51, Genes: 13, Seed availability: Yes. FN3856-S.SNP.11:27274883 chr11:027274883 0 W/27274883-27274883 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.733429;DP=2424;DP4=1144,1187,7,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.53031e-05;MQSB=0.842685;RPB=0.634253;SGB=33.9591;VDB=0.219792;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.11:27275445 chr11:027275445 0 W/27275445-27275445 FN2219-S SNP C -> T AC=1;AN=190;BQB=0.60505;DP=5291;DP4=2349,2599,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27715e-08;MQSB=0.937798;RPB=0.562;SGB=62.7569;VDB=0.932876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2682-S.SNP.11:27275450 chr11:027275450 0 W/27275450-27275450 FN2682-S SNP G -> C AC=1;AN=200;BQB=0.983759;DP=5073;DP4=2226,2575,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.53714e-10;MQSB=0.991609;RPB=0.664508;SGB=47.4799;VDB=0.641471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.11:27275452 chr11:027275452 0 W/27275452-27275452 FN2219-S SNP A -> G AC=1;AN=190;BQB=0.16729;DP=5238;DP4=2296,2674,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.78633e-07;MQSB=0.994362;RPB=0.41953;SGB=5.66499;VDB=0.72051;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.11:27279845 chr11:027279845 0 W/27279845-27279845 FN2477 SNP C -> T AC=2;AN=200;BQB=0.931791;DP=4292;DP4=1958,2103,23,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04489e-23;MQSB=0.887206;RPB=0.999029;SGB=134.004;VDB=0.314941;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G92D|150|LOC_Os11g45080|protein_coding|CODING|LOC_Os11g45080.1|4|1) FN1154-S.SNP.11:27283394 chr11:027283394 0 W/27283394-27283394 FN1154-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g45090 NB-ARC domain containing protein, expressed SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN4100-S.SNP.11:27288269 chr11:027288269 0 W/27288269-27288269 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.872969;DP=3002;DP4=1450,1453,6,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.52991e-14;MQSB=0.692193;RPB=0.858063;SGB=93.7308;VDB=0.975322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.11:27291759 chr11:027291759 0 W/27291759-27291759 FN3435-S SNP G -> A AC=2;AN=184;BQB=0.787787;DP=2489;DP4=1113,1295,5,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.27974e-09;MQSB=0.98641;RPB=0.064318;SGB=75.8731;VDB=0.320861;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.11:27294477 chr11:027294477 0 W/27294477-27294477 FN1384-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN-289.SNP.11:27298090 chr11:027298090 0 W/27298090-27298090 FN-289 Single Base Substitution G-A INTRON HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN4001-S.SNP.11:27303814 chr11:027303814 0 W/27303814-27303814 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.565197;DP=2410;DP4=1339,964,9,9;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0141079;MQB=0.999517;MQSB=0.000437632;RPB=0.985115;SGB=51.902;VDB=0.700604;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.11:27304108 chr11:027304108 0 W/27304108-27304108 FN786-S Single Base Substitution G-A INTERGENIC HOMO SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN522-S.SNP.11:27309304 chr11:027309304 0 W/27309304-27309304 FN522-S Single Base Substitution G-T INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3791-S.SNP.11:27309650 chr11:027309650 0 W/27309650-27309650 FN3791-S SNP G -> A AC=2;AN=190;BQB=0.999993;DP=2114;DP4=746,1236,8,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=4.80038e-10;MQSB=0.960651;RPB=0.828887;SGB=112.85;VDB=0.418295;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G104|162|LOC_Os11g45120|protein_coding|CODING|LOC_Os11g45120.1|2|1) FN971-S.SNP.11:27316699 chr11:027316699 0 W/27316699-27316699 FN971-S Single Base Substitution A-T INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3782-S.SNP.11:27320725 chr11:027320725 0 W/27320725-27320725 FN3782-S SNP A -> C AC=1;AN=190;BQB=0.956848;DP=8264;DP4=4017,3995,16,15;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0;MQB=0.556122;MQSB=0.467393;RPB=0.646787;SGB=135.619;VDB=0.924509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gCt|D595A|929|LOC_Os11g45130|protein_coding|CODING|LOC_Os11g45130.1|1|1) FN494-S.SNP.11:27321491 chr11:027321491 0 W/27321491-27321491 FN494-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g45130 pollen signalling protein with adenylyl cyclase activity, putative, expressed SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN3477-S.SNP.11:27322004 chr11:027322004 0 W/27322004-27322004 FN3477-S SNP C -> A AC=1;AN=184;BQB=0.695863;DP=7851;DP4=3480,4106,10,16;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.44414e-11;MQSB=1.58308e-05;RPB=0.32525;SGB=112.047;VDB=0.568406;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y918*|929|LOC_Os11g45130|protein_coding|CODING|LOC_Os11g45130.1|2|1) FN2331.SNP.11:27323446 chr11:027323446 0 W/27323446-27323446 FN2331 SNP C -> T AC=1;AN=192;BQB=0.697273;DP=16018;DP4=7292,7955,28,24;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=4.50317e-14;MQSB=0.0920013;RPB=0.809882;SGB=-107.57;VDB=0.643499;EFF=INTRON(MODIFIER||||929|LOC_Os11g45130|protein_coding|CODING|LOC_Os11g45130.1|2|1) FN916-S.SNP.11:27323788 chr11:027323788 0 W/27323788-27323788 FN916-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN837-S.SNP.11:27330933 chr11:027330933 0 W/27330933-27330933 FN837-S Single Base Substitution C-T INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN3420-S.SNP.11:27332064 chr11:027332064 0 W/27332064-27332064 FN3420-S SNP G -> A AC=1;AN=184;BQB=0.999835;DP=3326;DP4=1686,1475,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.49719e-06;MQSB=0.946085;RPB=0.982802;SGB=15.7097;VDB=0.391706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2715-S.SNP.11:27332789 chr11:027332789 0 W/27332789-27332789 FN2715-S SNP C -> A AC=2;AN=200;BQB=0.997469;DP=5043;DP4=2400,2168,11,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.52479e-18;MQSB=0.874349;RPB=0.998838;SGB=38.383;VDB=0.383751;EFF=INTERGENIC(MODIFIER||||||||||1) FN1740-S.SNP.11:27355404 chr11:027355404 0 W/27355404-27355404 FN1740-S SNP G -> C AC=1;AN=188;BQB=0.50146;DP=3601;DP4=1675,1891,9,19;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.71051e-11;MQSB=0.823473;RPB=0.93851;SGB=-73.5561;VDB=0.379081;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.11:27361102 chr11:027361102 0 W/27361102-27361102 FN1114-S Single Base Substitution C-A INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN3454-S.SNP.11:27361940 chr11:027361940 0 W/27361940-27361940 FN3454-S SNP A -> T AC=1;AN=184;BQB=0.968263;DP=2702;DP4=1271,1333,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.38119e-07;MQSB=0.875732;RPB=0.181123;SGB=39.699;VDB=0.032944;EFF=INTERGENIC(MODIFIER||||||||||1) FN1029-S.SNP.11:27375804 chr11:027375804 0 W/27375804-27375804 FN1029-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1287-S.SNP.11:27382432 chr11:027382432 0 W/27382432-27382432 FN1287-S Single Base Substitution G-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2179-S.SNP.11:27382709 chr11:027382709 0 W/27382709-27382709 FN2179-S SNP C -> T AC=1;AN=168;BQB=0.581847;DP=3487;DP4=1464,1984,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.7842e-06;MQSB=0.983945;RPB=0.86184;SGB=-0.101747;VDB=0.441271;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.11:27388322 chr11:027388322 0 W/27388322-27388322 FN1540-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g45250 ribonucleases P/MRP protein subunit POP1 containing protein, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN4073-S.SNP.11:27398912 chr11:027398912 0 W/27398912-27398912 FN4073-S SNP A -> T AC=1;AN=182;BQB=0.632832;DP=2657;DP4=1398,1175,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.57497e-08;MQSB=0.991035;RPB=0.972688;SGB=25.655;VDB=0.666526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3676-S.SNP.11:27408331 chr11:027408331 0 W/27408331-27408331 FN3676-S SNP T -> C AC=1;AN=190;BQB=0.890817;DP=3086;DP4=1484,1467,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.37158e-06;MQSB=0.953755;RPB=0.680652;SGB=21.8853;VDB=0.986588;EFF=INTRON(MODIFIER||||140|LOC_Os11g45290|protein_coding|CODING|LOC_Os11g45290.1|1|1),INTRON(MODIFIER||||139|LOC_Os11g45290|protein_coding|CODING|LOC_Os11g45290.2|1|1) FN2792-S.SNP.11:27410360 chr11:027410360 0 W/27410360-27410360 FN2792-S SNP A -> G AC=1;AN=198;BQB=0.968378;DP=4434;DP4=2000,2163,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.18316e-11;MQSB=0.999994;RPB=0.984754;SGB=60.4858;VDB=0.442671;EFF=INTERGENIC(MODIFIER||||||||||1) FN2267-S.SNP.11:27411285 chr11:027411285 0 W/27411285-27411285 FN2267-S SNP T -> C AC=1;AN=190;BQB=0.748052;DP=2858;DP4=1491,1024,13,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000349895;MQB=6.62593e-08;MQSB=2.32061e-06;RPB=0.215102;SGB=28.7675;VDB=0.071376;EFF=INTRON(MODIFIER||||279|LOC_Os11g45295|protein_coding|CODING|LOC_Os11g45295.1|1|1) FN1121-S.SNP.11:27411739 chr11:027411739 0 W/27411739-27411739 FN1121-S Single Base Substitution A-C INTRON HOMO SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN-32.SNP.11:27446585 chr11:027446585 0 W/27446585-27446585 FN-32 Single Base Substitution C-G INTERGENIC Homo SNo: 32, Mutant_ID: FN-32, Generation: M2, Mutations: 31, Genes: 63, Seed availability: Yes. FN1429-S.SNP.11:27458566 chr11:027458566 0 W/27458566-27458566 FN1429-S Single Base Substitution C-G INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN523-S.SNP.11:27472287 chr11:027472287 0 W/27472287-27472287 FN523-S Single Base Substitution G-T INTRON HET SNo: 521, Mutant_ID: FN523-S, Generation: M2, Mutations: 41, Genes: 11, Seed availability: Yes. FN532-S.SNP.11:27472287 chr11:027472287 0 W/27472287-27472287 FN532-S Single Base Substitution G-T INTRON HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN2194-S.SNP.11:27473010 chr11:027473010 0 W/27473010-27473010 FN2194-S SNP C -> A AC=2;AN=190;BQB=0.328165;DP=4556;DP4=2145,2124,35,37;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.73345e-30;MQSB=0.609258;RPB=0.617595;SGB=276.239;VDB=0.965009;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S128|574|LOC_Os11g45390|protein_coding|CODING|LOC_Os11g45390.1|3|1) FN1642-S.SNP.11:27481699 chr11:027481699 0 W/27481699-27481699 FN1642-S Single Base Substitution C-T INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN971-S.SNP.11:27483937 chr11:027483937 0 W/27483937-27483937 FN971-S Single Base Substitution T-C INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN418-S.SNP.11:27496739 chr11:027496739 0 W/27496739-27496739 FN418-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g45410 expressed protein SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN724-S.SNP.11:27587595 chr11:027587595 0 W/27587595-27587595 FN724-S Single Base Substitution T-C INTRON HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN739-S.SNP.11:27587669 chr11:027587669 0 W/27587669-27587669 FN739-S Single Base Substitution G-A INTRON HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN1682-S.SNP.11:27588440 chr11:027588440 0 W/27588440-27588440 FN1682-S SNP G -> C AC=1;AN=188;BQB=0.62369;DP=1978;DP4=809,1133,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=0.334656;MQSB=0.987321;RPB=0.997185;SGB=10.8165;VDB=0.979666;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Gat|H38D|624|LOC_Os11g45580|protein_coding|CODING|LOC_Os11g45580.1|1|1) FN487-S.SNP.11:27594197 chr11:027594197 0 W/27594197-27594197 FN487-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN558-S.SNP.11:27595828 chr11:027595828 0 W/27595828-27595828 FN558-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2411.SNP.11:27606030 chr11:027606030 0 W/27606030-27606030 FN2411 SNP A -> G AC=1;AN=200;BQB=0.417956;DP=4732;DP4=2296,2071,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63119e-15;MQSB=0.976245;RPB=0.947805;SGB=127.947;VDB=0.850433;EFF=INTRON(MODIFIER||||771|LOC_Os11g45620|protein_coding|CODING|LOC_Os11g45620.1|4|1) FN2639-S.SNP.11:27611075 chr11:027611075 0 W/27611075-27611075 FN2639-S SNP G -> T AC=1;AN=200;BQB=0.98185;DP=4368;DP4=1560,2554,12,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22474e-17;MQSB=0.0118462;RPB=0.280375;SGB=30.3571;VDB=0.500088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.11:27627847 chr11:027627847 0 W/27627847-27627847 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-268.SNP.11:27644922 chr11:027644922 0 W/27644922-27644922 FN-268 Single Base Substitution G-T INTERGENIC HET SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3501-S.SNP.11:27649405 chr11:027649405 0 W/27649405-27649405 FN3501-S SNP A -> G AC=2;AN=188;BQB=0.371042;DP=2517;DP4=1173,1295,7,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.65427e-07;MQSB=0.989275;RPB=0.999323;SGB=50.1574;VDB=0.953939;EFF=UTR_3_PRIME(MODIFIER||1851||647|LOC_Os11g45710|protein_coding|CODING|LOC_Os11g45710.1|13|1),UTR_3_PRIME(MODIFIER||1851||647|LOC_Os11g45710|protein_coding|CODING|LOC_Os11g45710.3|13|1),UTR_3_PRIME(MODIFIER||1851||647|LOC_Os11g45710|protein_coding|CODING|LOC_Os11g45710.2|12|1),UTR_3_PRIME(MODIFIER||1851||647|LOC_Os11g45710|protein_coding|CODING|LOC_Os11g45710.4|12|1),UTR_3_PRIME(MODIFIER||1851||647|LOC_Os11g45710|protein_coding|CODING|LOC_Os11g45710.6|12|1) FN805-S.SNP.11:27656682 chr11:027656682 0 W/27656682-27656682 FN805-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g45720 pectinesterase, putative, expressed SNo: 723, Mutant_ID: FN805-S, Generation: M2, Mutations: 70, Genes: 48, Seed availability: Yes. FN1519-S.SNP.11:27660284 chr11:027660284 0 W/27660284-27660284 FN1519-S Single Base Substitution C-T INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2141-S.SNP.11:27672110 chr11:027672110 0 W/27672110-27672110 FN2141-S SNP G -> T AC=1;AN=168;BQB=0.0238182;DP=3719;DP4=1893,1776,17,19;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=0.00393307;MQSB=0.490786;RPB=0.997597;SGB=-250.167;VDB=0.955427;EFF=INTRON(MODIFIER||||285|LOC_Os11g45740|protein_coding|CODING|LOC_Os11g45740.1|2|1) FN864-S.SNP.11:27679181 chr11:027679181 0 W/27679181-27679181 FN864-S Single Base Substitution T-C INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN416-S.SNP.11:27679693 chr11:027679693 0 W/27679693-27679693 FN416-S Single Base Substitution T-A INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN2781-S.SNP.11:27682494 chr11:027682494 0 W/27682494-27682494 FN2781-S SNP G -> A AC=1;AN=186;BQB=0.946805;DP=4259;DP4=2047,2003,7,9;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0;MQB=0.000102124;MQSB=0.0705561;RPB=0.832084;SGB=6.15916;VDB=0.0183861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3729-S.SNP.11:27683590 chr11:027683590 0 W/27683590-27683590 FN3729-S SNP T -> A AC=1;AN=190;BQB=0.951127;DP=3112;DP4=1446,1519,11,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.75224e-14;MQSB=0.718048;RPB=0.972222;SGB=103.742;VDB=0.802453;EFF=INTERGENIC(MODIFIER||||||||||1) FN2362.SNP.11:27687913 chr11:027687913 0 W/27687913-27687913 FN2362 SNP A -> G AC=1;AN=192;BQB=0.364727;DP=5135;DP4=2505,2313,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=5.32689e-06;MQSB=0.000508114;RPB=0.210498;SGB=64.7304;VDB=0.509425;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G496|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G496|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.2|3|1) FN3341-S.SNP.11:27688157 chr11:027688157 0 W/27688157-27688157 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.992149;DP=2661;DP4=1351,1234,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.07625e-10;MQSB=0.995586;RPB=0.977666;SGB=46.3132;VDB=0.307546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S415N|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGt/aAt|S415N|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.2|3|1) FN3341-S.SNP.11:27688160 chr11:027688160 0 W/27688160-27688160 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.948959;DP=2664;DP4=1372,1212,9,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.88991e-11;MQSB=0.999563;RPB=0.940944;SGB=46.3132;VDB=0.389411;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C414Y|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.1|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C414Y|1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.2|3|1) FN-94.SNP.11:27690391 chr11:027690391 0 W/27690391-27690391 FN-94 Single Base Substitution G-T UTR_5_PRIME HOMO SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN3556-S.SNP.11:27693814 chr11:027693814 0 W/27693814-27693814 FN3556-S SNP C -> T AC=1;AN=188;BQB=0.683278;DP=2766;DP4=1439,1241,19,13;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0;MQB=3.47886e-17;MQSB=0.137698;RPB=0.0350455;SGB=139.845;VDB=0.350246;EFF=INTRON(MODIFIER||||1200|LOC_Os11g45750|protein_coding|CODING|LOC_Os11g45750.1|1|1) FN1466-S.SNP.11:27698016 chr11:027698016 0 W/27698016-27698016 FN1466-S Single Base Substitution C-T INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN1424-S.SNP.11:27699841 chr11:027699841 0 W/27699841-27699841 FN1424-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1199, Mutant_ID: FN1424-S, Generation: M2, Mutations: 74, Genes: 195, Seed availability: No. FN570-S.SNP.11:27703664 chr11:027703664 0 W/27703664-27703664 FN570-S Single Base Substitution G-A INTERGENIC HOMO SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN4110-S.SNP.11:27705138 chr11:027705138 0 W/27705138-27705138 FN4110-S SNP T -> C AC=2;AN=182;BQB=0.999977;DP=2917;DP4=1384,1389,18,21;HOB=0.0217365;ICB=0.494567;MQ=45;MQ0F=0;MQB=7.58501e-22;MQSB=0.999541;RPB=0.998215;SGB=126.91;VDB=0.783208;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D592G|998|LOC_Os11g45790|protein_coding|CODING|LOC_Os11g45790.1|2|1) FN1124-S.SNP.11:27705912 chr11:027705912 0 W/27705912-27705912 FN1124-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g45790 NB-ARC domain containing protein, expressed SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN889-S.SNP.11:27712752 chr11:027712752 0 W/27712752-27712752 FN889-S Single Base Substitution G-T INTERGENIC HOMO SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN2298.SNP.11:27734860 chr11:027734860 0 W/27734860-27734860 FN2298 SNP C -> T AC=1;AN=192;BQB=0.799649;DP=5113;DP4=2370,2400,24,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.13229e-19;MQSB=0.923599;RPB=0.879351;SGB=-4.04606;VDB=0.296864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H97Y|667|LOC_Os11g45840|protein_coding|CODING|LOC_Os11g45840.1|1|1) FN3522-S.SNP.11:27740539 chr11:027740539 0 W/27740539-27740539 FN3522-S SNP G -> A AC=2;AN=188;BQB=0.891396;DP=2339;DP4=1255,1024,7,3;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0;MQB=0.000997235;MQSB=3.27853e-09;RPB=0.91454;SGB=39.8925;VDB=0.727693;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V78|259|LOC_Os11g45850|protein_coding|CODING|LOC_Os11g45850.1|2|1) FN1224-S.SNP.11:27740626 chr11:027740626 0 W/27740626-27740626 FN1224-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g45850 WRKY61, expressed SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN1022-S.SNP.11:27741462 chr11:027741462 0 W/27741462-27741462 FN1022-S Single Base Substitution T-G INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN_770-6-1.SNP.11:27744486 chr11:027744486 0 W/27744486-27744486 FN_770-6-1 Single Base Substitution G-A Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN_770-6-1.SNP.11:27744487 chr11:027744487 0 W/27744487-27744487 FN_770-6-1 Single Base Substitution G-A Homo SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN4247-S.SNP.11:27744511 chr11:027744511 0 W/27744511-27744511 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.914464;DP=2253;DP4=1024,1156,11,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.43689e-11;MQSB=0.828649;RPB=0.247382;SGB=52.0913;VDB=0.00442011;EFF=INTRON(MODIFIER||||794|LOC_Os11g45864|protein_coding|CODING|LOC_Os11g45864.1|9|1) FN_935-1.SNP.11:27759452 chr11:027759452 0 W/27759452-27759452 FN_935-1 Single Base Substitution C-T Homo SNo: 1502, Mutant_ID: FN_935-1, Generation: M3, Mutations: 57, Genes: 22, Seed availability: Yes. FN1389-S.SNP.11:27765419 chr11:027765419 0 W/27765419-27765419 FN1389-S Single Base Substitution G-A INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN3787-S.SNP.11:27767378 chr11:027767378 0 W/27767378-27767378 FN3787-S SNP G -> C AC=1;AN=190;BQB=0.992445;DP=1537;DP4=325,1156,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=0.000164194;MQSB=0.429631;RPB=0.301254;SGB=58.2031;VDB=0.190554;EFF=SPLICE_SITE_REGION(LOW||||194|LOC_Os11g45899|protein_coding|CODING|LOC_Os11g45899.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|ctG/ctC|L162|194|LOC_Os11g45899|protein_coding|CODING|LOC_Os11g45899.1|5|1) FN-241.SNP.11:27777349 chr11:027777349 0 W/27777349-27777349 FN-241 Single Base Substitution A-G INTERGENIC HOMO SNo: 240, Mutant_ID: FN-241, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN618-S.SNP.11:27787766 chr11:027787766 0 W/27787766-27787766 FN618-S Single Base Substitution G-A INTERGENIC HET SNo: 583, Mutant_ID: FN618-S, Generation: M2, Mutations: 62, Genes: 58, Seed availability: Yes. FN1610-S.SNP.11:27791618 chr11:027791618 0 W/27791618-27791618 FN1610-S Single Base Substitution A-T INTRON Homo SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN3453-S.SNP.11:27805572 chr11:027805572 0 W/27805572-27805572 FN3453-S SNP G -> A AC=1;AN=184;BQB=0.886611;DP=2331;DP4=1541,715,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0;MQB=9.91817e-08;MQSB=0.131555;RPB=0.783006;SGB=48.7425;VDB=0.0693264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.11:27811016 chr11:027811016 0 W/27811016-27811016 FN2667-S SNP T -> A AC=1;AN=200;BQB=0.726306;DP=5093;DP4=2484,2422,6,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=8.14209e-07;MQSB=0.93604;RPB=0.551067;SGB=54.2646;VDB=0.0889066;EFF=INTERGENIC(MODIFIER||||||||||1) FN4166-S.SNP.11:27825376 chr11:027825376 0 W/27825376-27825376 FN4166-S SNP G -> T AC=2;AN=170;BQB=0.999726;DP=2937;DP4=1619,1225,13,12;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=4.84121e-10;MQSB=0.883712;RPB=0.997151;SGB=105.627;VDB=0.249573;EFF=INTERGENIC(MODIFIER||||||||||1) FN2140-S.SNP.11:27826120 chr11:027826120 0 W/27826120-27826120 FN2140-S SNP T -> A AC=1;AN=168;BQB=0.610293;DP=3835;DP4=1967,1820,12,20;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0;MQB=0.00149751;MQSB=0.000261482;RPB=0.712691;SGB=-191.465;VDB=0.0328266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.11:27826424 chr11:027826424 0 W/27826424-27826424 FN1348-S Single Base Substitution A-T INTERGENIC HET SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN1722-S.SNP.11:27835446 chr11:027835446 0 W/27835446-27835446 FN1722-S SNP G -> A AC=1;AN=188;BQB=0.220385;DP=3684;DP4=2058,1584,18,16;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0;MQB=5.54426e-07;MQSB=0.0414396;RPB=0.52986;SGB=-82.2964;VDB=0.71515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1555-S.SNP.11:27837020 chr11:027837020 0 W/27837020-27837020 FN1555-S Single Base Substitution G-A INTERGENIC HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. FN2715-S.SNP.11:27843437 chr11:027843437 0 W/27843437-27843437 FN2715-S SNP C -> G AC=1;AN=200;BQB=0.478743;DP=4568;DP4=2316,1928,6,9;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0;MQB=0.193805;MQSB=0.988328;RPB=0.979858;SGB=63.4749;VDB=0.0307311;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggG|G249|598|LOC_Os11g46000|protein_coding|CODING|LOC_Os11g46000.1|3|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggG|G229|578|LOC_Os11g46000|protein_coding|CODING|LOC_Os11g46000.3|2|1),UTR_3_PRIME(MODIFIER||902||155|LOC_Os11g46000|protein_coding|CODING|LOC_Os11g46000.2|1|1) FN1622-S.SNP.11:27995258 chr11:027995258 0 W/27995258-27995258 FN1622-S Single Base Substitution A-T INTRON HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN1220-S.SNP.11:27995972 chr11:027995972 0 W/27995972-27995972 FN1220-S Single Base Substitution A-G INTRON HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN-223.SNP.11:28002736 chr11:028002736 0 W/28002736-28002736 FN-223 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g46240 retrotransposon protein, putative, unclassified, expressed SNo: 222, Mutant_ID: FN-223, Generation: M2, Mutations: 98, Genes: 115, Seed availability: Yes. FN2715-S.SNP.11:28003589 chr11:028003589 0 W/28003589-28003589 FN2715-S SNP T -> A AC=2;AN=200;BQB=0.997014;DP=4934;DP4=2389,2325,22,17;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0;MQB=1.93241e-05;MQSB=0.756389;RPB=0.258703;SGB=43.1985;VDB=0.419814;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tAc|F951Y|1398|LOC_Os11g46240|protein_coding|CODING|LOC_Os11g46240.1|7|1) FN3764-S.SNP.11:28009636 chr11:028009636 0 W/28009636-28009636 FN3764-S SNP C -> G AC=1;AN=190;BQB=0.997144;DP=2616;DP4=1296,1236,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.00538067;MQSB=0.237252;RPB=0.925843;SGB=49.0954;VDB=0.713589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Gaa|Q720E|1530|LOC_Os11g46250|protein_coding|CODING|LOC_Os11g46250.1|7|1) FN850-S.SNP.11:28092565 chr11:028092565 0 W/28092565-28092565 FN850-S Single Base Substitution G-A INTERGENIC HET SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN-402.SNP.11:28121430 chr11:028121430 0 W/28121430-28121430 FN-402 Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN3853-S.SNP.11:28124753 chr11:028124753 0 W/28124753-28124753 FN3853-S SNP T -> C AC=1;AN=158;BQB=0.701123;DP=2244;DP4=1022,1151,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00311943;MQB=8.71813e-05;MQSB=0.00459993;RPB=0.306062;SGB=33.9591;VDB=0.799646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3968-S.SNP.11:28128450 chr11:028128450 0 W/28128450-28128450 FN3968-S SNP T -> C AC=1;AN=168;BQB=0.645115;DP=2481;DP4=1228,1171,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0;MQB=3.89989e-05;MQSB=0.000294642;RPB=0.681798;SGB=48.4712;VDB=0.440591;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.11:28129455 chr11:028129455 0 W/28129455-28129455 FN2597-S SNP A -> G AC=1;AN=186;BQB=0.734314;DP=4296;DP4=2161,1914,10,4;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=4.33486e-09;MQSB=0.959682;RPB=0.534865;SGB=40.149;VDB=0.78588;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.11:28141436 chr11:028141436 0 W/28141436-28141436 FN1430-S Single Base Substitution G-C INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1416-S.SNP.11:28161209 chr11:028161209 0 W/28161209-28161209 FN1416-S Single Base Substitution G-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN3452-S.SNP.11:28164770 chr11:028164770 0 W/28164770-28164770 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.91738;DP=3237;DP4=1636,1522,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=4.23652e-09;MQSB=0.999205;RPB=0.0198115;SGB=62.3078;VDB=0.213204;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S534|710|LOC_Os11g46880|protein_coding|CODING|LOC_Os11g46880.1|4|1) FN584-S.SNP.11:28167369 chr11:028167369 0 W/28167369-28167369 FN584-S Single Base Substitution G-A INTERGENIC HOMO SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN705-S.SNP.11:28170155 chr11:028170155 0 W/28170155-28170155 FN705-S Single Base Substitution A-G INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN2656-S.SNP.11:28176843 chr11:028176843 0 W/28176843-28176843 FN2656-S SNP A -> T AC=1;AN=198;BQB=0.549699;DP=4844;DP4=2424,2174,18,14;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=9.88491e-17;MQSB=0.985591;RPB=0.836249;SGB=31.9623;VDB=0.665159;EFF=INTRON(MODIFIER||||706|LOC_Os11g46900|protein_coding|CODING|LOC_Os11g46900.1|2|1) FN2614-S.SNP.11:28185076 chr11:028185076 0 W/28185076-28185076 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.846123;DP=5022;DP4=3251,1526,28,14;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0217045;MQB=0.854697;MQSB=5.6667e-28;RPB=0.882695;SGB=94.2223;VDB=0.0821794;EFF=INTERGENIC(MODIFIER||||||||||1) FN-135.SNP.11:28220644 chr11:028220644 0 W/28220644-28220644 FN-135 Single Base Substitution C-T INTRON HOMO SNo: 135, Mutant_ID: FN-135, Generation: M2, Mutations: 42, Genes: 16, Seed availability: Yes. FN2157-S.SNP.11:28240714 chr11:028240714 0 W/28240714-28240714 FN2157-S SNP G -> A AC=2;AN=168;BQB=0.25308;DP=2233;DP4=1689,501,24,8;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.00358262;MQB=0.00785404;MQSB=2.44957e-15;RPB=0.568888;SGB=-118.616;VDB=0.356457;EFF=INTRON(MODIFIER||||1172|LOC_Os11g46980|protein_coding|CODING|LOC_Os11g46980.1|3|1) FN2533-S.SNP.11:28241693 chr11:028241693 0 W/28241693-28241693 FN2533-S SNP C -> A AC=1;AN=188;BQB=0.765159;DP=3603;DP4=1613,1837,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=33;MQ0F=0;MQB=0.0173383;MQSB=0.00305184;RPB=0.986453;SGB=40.3588;VDB=0.00262538;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.11:28241989 chr11:028241989 0 W/28241989-28241989 FN2789-S SNP G -> T AC=1;AN=186;BQB=0.418692;DP=2703;DP4=853,1521,10,8;HOB=5.78101e-05;ICB=0.000116242;MQ=41;MQ0F=0;MQB=5.03989e-05;MQSB=2.42896e-24;RPB=0.724222;SGB=-35.8307;VDB=0.579429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.11:28244249 chr11:028244249 0 W/28244249-28244249 FN1053-S Single Base Substitution G-A INTERGENIC HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN2678-S.SNP.11:28340747 chr11:028340747 0 W/28340747-28340747 FN2678-S SNP C -> T AC=1;AN=198;BQB=0.589236;DP=5182;DP4=2643,2267,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.03487e-07;MQSB=0.241018;RPB=0.977589;SGB=61.9006;VDB=0.00758392;EFF=INTRON(MODIFIER||||1043|LOC_Os11g47130|protein_coding|CODING|LOC_Os11g47130.1|1|1) FN456-S.SNP.11:28344190 chr11:028344190 0 W/28344190-28344190 FN456-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os11g47130 protein transporter, putative, expressed SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-362.SNP.11:28348102 chr11:028348102 0 W/28348102-28348102 FN-362 Single Base Substitution G-A INTERGENIC HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2683-S.SNP.11:28376916 chr11:028376916 0 W/28376916-28376916 FN2683-S SNP A -> G AC=2;AN=198;BQB=0.286419;DP=4878;DP4=2381,2198,17,26;HOB=0.019998;ICB=0.495001;MQ=39;MQ0F=0;MQB=7.58335e-07;MQSB=0.0960096;RPB=0.596222;SGB=49.6192;VDB=0.758785;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aGc|N197S|1102|LOC_Os11g47180|protein_coding|CODING|LOC_Os11g47180.1|1|1) FN705-S.SNP.11:28398796 chr11:028398796 0 W/28398796-28398796 FN705-S Single Base Substitution G-T INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN1180-S.SNP.11:28410559 chr11:028410559 0 W/28410559-28410559 FN1180-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g47240 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN2578-S.SNP.11:28447064 chr11:028447064 0 W/28447064-28447064 FN2578-S SNP C -> T AC=1;AN=186;BQB=0.803008;DP=3919;DP4=1952,1795,8,8;HOB=5.78101e-05;ICB=0.000116242;MQ=36;MQ0F=0.00433784;MQB=0.0069427;MQSB=0.753566;RPB=0.941779;SGB=47.3393;VDB=0.334298;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F898|1107|LOC_Os11g47300|protein_coding|CODING|LOC_Os11g47300.1|1|1) FN2539-S.SNP.11:28448966 chr11:028448966 0 W/28448966-28448966 FN2539-S SNP C -> G AC=1;AN=186;BQB=0.996827;DP=3772;DP4=1646,1729,6,10;HOB=5.78101e-05;ICB=0.000116242;MQ=47;MQ0F=0;MQB=1.09019e-05;MQSB=4.48585e-06;RPB=0.865015;SGB=6.15916;VDB=0.997331;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.11:28452893 chr11:028452893 0 W/28452893-28452893 FN1749-S SNP T -> C AC=1;AN=188;BQB=0.172954;DP=5249;DP4=1916,3291,10,16;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00076205;MQB=0.0095203;MQSB=0;RPB=0.468296;SGB=-101.181;VDB=0.802933;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N125S|587|LOC_Os11g47310|protein_coding|CODING|LOC_Os11g47310.1|1|1) FN2611-S.SNP.11:28453493 chr11:028453493 0 W/28453493-28453493 FN2611-S SNP G -> A AC=1;AN=198;BQB=0.913296;DP=4621;DP4=2107,2258,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=1.43437e-10;MQSB=0.531704;RPB=0.485522;SGB=55.5366;VDB=0.28065;EFF=UTR_5_PRIME(MODIFIER||227||587|LOC_Os11g47310|protein_coding|CODING|LOC_Os11g47310.1|1|1) FN2089-S.SNP.11:28468659 chr11:028468659 0 W/28468659-28468659 FN2089-S SNP A -> G AC=1;AN=168;BQB=0.295207;DP=3392;DP4=1435,1917,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0389151;MQB=0.0669958;MQSB=7.63203e-10;RPB=0.60727;SGB=-12.3568;VDB=0.913357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I144T|1105|LOC_Os11g47320|protein_coding|CODING|LOC_Os11g47320.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I144T|1101|LOC_Os11g47320|protein_coding|CODING|LOC_Os11g47320.2|3|1) FN2415.SNP.11:28469086 chr11:028469086 0 W/28469086-28469086 FN2415 SNP T -> C AC=1;AN=200;BQB=0.41974;DP=4956;DP4=2191,2462,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88612e-09;MQSB=0.00784948;RPB=0.9704;SGB=47.4799;VDB=0.318781;EFF=INTRON(MODIFIER||||1105|LOC_Os11g47320|protein_coding|CODING|LOC_Os11g47320.1|1|1),INTRON(MODIFIER||||1101|LOC_Os11g47320|protein_coding|CODING|LOC_Os11g47320.2|1|1) FN3439-S.SNP.11:28470274 chr11:028470274 0 W/28470274-28470274 FN3439-S SNP C -> A AC=1;AN=184;BQB=0.999792;DP=2733;DP4=1499,1064,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.41792e-06;MQSB=0.83691;RPB=0.966386;SGB=35.7479;VDB=0.857521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.11:28488125 chr11:028488125 0 W/28488125-28488125 FN2784-S SNP G -> A AC=1;AN=198;BQB=0.874538;DP=4038;DP4=1985,1858,11,19;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.0796e-18;MQSB=0.997562;RPB=0.434834;SGB=97.671;VDB=0.783363;EFF=INTERGENIC(MODIFIER||||||||||1) FN1073-S.SNP.11:28489457 chr11:028489457 0 W/28489457-28489457 FN1073-S Single Base Substitution A-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN3343-S.SNP.11:28492035 chr11:028492035 0 W/28492035-28492035 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.999659;DP=3437;DP4=1495,1826,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.13087e-11;MQSB=0.951633;RPB=0.860337;SGB=49.835;VDB=0.484396;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccA|P118|196|LOC_Os11g47360|protein_coding|CODING|LOC_Os11g47360.1|2|1) FN2204-S.SNP.11:28501058 chr11:028501058 0 W/28501058-28501058 FN2204-S SNP G -> A AC=1;AN=190;BQB=0.648193;DP=4949;DP4=2299,2256,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.44779e-07;MQSB=0.569809;RPB=0.211625;SGB=50.3161;VDB=0.689544;EFF=INTERGENIC(MODIFIER||||||||||1) FN705-S.SNP.11:28501199 chr11:028501199 0 W/28501199-28501199 FN705-S Single Base Substitution T-C INTERGENIC HOMO SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN3712-S.SNP.11:28504613 chr11:028504613 0 W/28504613-28504613 FN3712-S SNP T -> G AC=2;AN=190;BQB=0.998807;DP=2574;DP4=1235,1213,10,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000777001;MQB=3.2395e-13;MQSB=0.998619;RPB=0.404464;SGB=112.85;VDB=0.928771;EFF=INTERGENIC(MODIFIER||||||||||1) FN-155.SNP.11:28517235 chr11:028517235 0 W/28517235-28517235 FN-155 Single Base Substitution C-T INTERGENIC HET SNo: 155, Mutant_ID: FN-155, Generation: M2, Mutations: 105, Genes: 23, Seed availability: Yes. FN4142-S.SNP.11:28517846 chr11:028517846 0 W/28517846-28517846 FN4142-S SNP T -> A AC=1;AN=170;BQB=0.980986;DP=2620;DP4=1233,1261,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.60673e-07;MQSB=0.999805;RPB=0.763591;SGB=43.4296;VDB=0.575864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L156Q|561|LOC_Os11g47410|protein_coding|CODING|LOC_Os11g47410.1|1|1) FN756-S.SNP.11:28519732 chr11:028519732 0 W/28519732-28519732 FN756-S Single Base Substitution T-A INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN855-S.SNP.11:28522115 chr11:028522115 0 W/28522115-28522115 FN855-S Single Base Substitution T-A INTERGENIC HOMO SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN4167-S.SNP.11:28525144 chr11:028525144 0 W/28525144-28525144 FN4167-S SNP T -> A AC=2;AN=170;BQB=0.912562;DP=2234;DP4=1245,857,9,7;HOB=0.0232526;ICB=0.494188;MQ=37;MQ0F=0.0434199;MQB=0.935977;MQSB=6.85408e-10;RPB=0.0662194;SGB=45.206;VDB=0.293362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L882I|1068|LOC_Os11g47420|protein_coding|CODING|LOC_Os11g47420.1|2|1) FN1624-S.SNP.11:28533380 chr11:028533380 0 W/28533380-28533380 FN1624-S Single Base Substitution G-C INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN-227.SNP.11:28536443 chr11:028536443 0 W/28536443-28536443 FN-227 Single Base Substitution G-A INTRON HET SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN-178.SNP.11:28616561 chr11:028616561 0 W/28616561-28616561 FN-178 Single Base Substitution G-A INTERGENIC HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN701-S.SNP.11:28626838 chr11:028626838 0 W/28626838-28626838 FN701-S Single Base Substitution A-T INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1445-S.SNP.11:28644341 chr11:028644341 0 W/28644341-28644341 FN1445-S Single Base Substitution G-A STOP_GAINED HET LOC_Os11g47445 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3407-S.SNP.11:28644587 chr11:028644587 0 W/28644587-28644587 FN3407-S SNP C -> T AC=2;AN=184;BQB=0.993633;DP=3090;DP4=1344,1670,8,14;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=1.91868e-09;MQSB=0.121939;RPB=0.750947;SGB=93.9603;VDB=0.557653;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.11:28654585 chr11:028654585 0 W/28654585-28654585 FN2329 SNP T -> C AC=1;AN=192;BQB=0.762143;DP=4835;DP4=2229,2268,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.31556e-10;MQSB=0.962914;RPB=0.198981;SGB=8.91915;VDB=0.696864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V197A|384|LOC_Os11g47447|protein_coding|CODING|LOC_Os11g47447.1|2|1) FN2595-S.SNP.11:28657415 chr11:028657415 0 W/28657415-28657415 FN2595-S SNP C -> G AC=2;AN=198;BQB=0.454095;DP=3966;DP4=1810,1927,21,8;HOB=0.019998;ICB=0.495001;MQ=45;MQ0F=0;MQB=1.54635e-11;MQSB=0.253534;RPB=0.903547;SGB=60.4858;VDB=0.558508;EFF=INTERGENIC(MODIFIER||||||||||1) FN2289.SNP.11:28663691 chr11:028663691 0 W/28663691-28663691 FN2289 SNP A -> T AC=2;AN=192;BQB=0.613906;DP=4849;DP4=2043,2299,28,25;HOB=0.0206163;ICB=0.494846;MQ=39;MQ0F=0;MQB=0.000717784;MQSB=1.3421e-07;RPB=0.32731;SGB=178.79;VDB=0.335668;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V123|283|LOC_Os11g47448|protein_coding|CODING|LOC_Os11g47448.1|3|1) FN1271-S.SNP.11:28664741 chr11:028664741 0 W/28664741-28664741 FN1271-S Single Base Substitution A-G INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN-67.SNP.11:28668945 chr11:028668945 0 W/28668945-28668945 FN-67 Single Base Substitution G-A INTERGENIC HET SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN3695-S.SNP.11:28668954 chr11:028668954 0 W/28668954-28668954 FN3695-S SNP C -> A AC=1;AN=190;BQB=0.978894;DP=2963;DP4=1185,1635,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.000642527;MQSB=0.818334;RPB=0.935914;SGB=50.3161;VDB=0.24284;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.11:28670362 chr11:028670362 0 W/28670362-28670362 FN4187-S SNP T -> C AC=1;AN=170;BQB=0.961325;DP=2721;DP4=1400,1189,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.13581e-08;MQSB=0.966199;RPB=0.755062;SGB=22.3266;VDB=0.0690071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y608C|822|LOC_Os11g47451|protein_coding|CODING|LOC_Os11g47451.1|3|1) FN3447-S.SNP.11:28672712 chr11:028672712 0 W/28672712-28672712 FN3447-S SNP G -> A AC=1;AN=184;BQB=0.999337;DP=3771;DP4=1988,1690,12,6;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.000471054;MQSB=0.0670562;RPB=0.164948;SGB=75.8731;VDB=0.820237;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.11:28674252 chr11:028674252 0 W/28674252-28674252 FN-344 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os11g47452 retrotransposon protein, putative, unclassified, expressed SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2440.SNP.11:28681436 chr11:028681436 0 W/28681436-28681436 FN2440 SNP A -> G AC=1;AN=200;BQB=0.401362;DP=3410;DP4=1941,1166,7,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00234604;MQB=2.04761e-06;MQSB=0.00948452;RPB=0.777929;SGB=33.0593;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.11:28681757 chr11:028681757 0 W/28681757-28681757 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.944772;DP=4446;DP4=2065,2032,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67402e-11;MQSB=0.966314;RPB=0.943062;SGB=76.3213;VDB=0.362543;EFF=INTERGENIC(MODIFIER||||||||||1) FN2626-S.SNP.11:28682238 chr11:028682238 0 W/28682238-28682238 FN2626-S SNP C -> T AC=1;AN=200;BQB=0.995687;DP=4159;DP4=1730,2194,3,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=9.49428e-05;MQSB=0.552332;RPB=0.372675;SGB=25.849;VDB=0.681429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.11:28685821 chr11:028685821 0 W/28685821-28685821 FN1405-S Single Base Substitution T-C INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3548-S.SNP.11:28690231 chr11:028690231 0 W/28690231-28690231 FN3548-S SNP T -> C AC=1;AN=188;BQB=0.973825;DP=3093;DP4=1505,1504,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.76609e-09;MQSB=0.982979;RPB=0.890199;SGB=67.1521;VDB=0.714384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2597-S.SNP.11:28690765 chr11:028690765 0 W/28690765-28690765 FN2597-S SNP C -> G AC=1;AN=198;BQB=0.925145;DP=4452;DP4=1941,2112,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0;MQB=3.94405e-05;MQSB=0.00919274;RPB=0.920692;SGB=-14.4309;VDB=0.340919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3748-S.SNP.11:28693951 chr11:028693951 0 W/28693951-28693951 FN3748-S SNP T -> C AC=1;AN=190;BQB=0.706777;DP=3044;DP4=1414,1454,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=1.19319e-07;MQSB=0.997558;RPB=0.296736;SGB=1.00337;VDB=0.57234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.11:28694335 chr11:028694335 0 W/28694335-28694335 FN1446-S Single Base Substitution G-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1283-S.SNP.11:28694633 chr11:028694633 0 W/28694633-28694633 FN1283-S Single Base Substitution A-T INTERGENIC HET SNo: 1097, Mutant_ID: FN1283-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1717-S.SNP.11:28695350 chr11:028695350 0 W/28695350-28695350 FN1717-S SNP A -> C AC=1;AN=188;BQB=0.103832;DP=3020;DP4=1079,1897,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0;MQB=0.24134;MQSB=0.986874;RPB=0.746679;SGB=-12.8266;VDB=0.812383;EFF=INTERGENIC(MODIFIER||||||||||1) FN500-S.SNP.11:28696874 chr11:028696874 0 W/28696874-28696874 FN500-S Single Base Substitution T-C INTERGENIC HOMO SNo: 498, Mutant_ID: FN500-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN2116-S.SNP.11:28708135 chr11:028708135 0 W/28708135-28708135 FN2116-S SNP A -> C AC=1;AN=168;BQB=0.146754;DP=3179;DP4=1667,1462,16,11;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.000314564;MQB=0.207813;MQSB=0.0186982;RPB=0.981864;SGB=-74.3449;VDB=0.274098;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A967|999|LOC_Os11g47470|protein_coding|CODING|LOC_Os11g47470.1|5|1) FN1555-S.SNP.11:28717706 chr11:028717706 0 W/28717706-28717706 FN1555-S Single Base Substitution T-C INTERGENIC HET SNo: 1300, Mutant_ID: FN1555-S, Generation: M2, Mutations: 66, Genes: 72, Seed availability: Yes. W596-1-1.SNP.11:28722967 chr11:028722967 0 W/28722967-28722967 W596-1-1 Single Base Substitution A-C INTERGENIC HET SNo: 1431, Mutant_ID: W596-1-1, Generation: M2, Mutations: 42, Genes: 58, Seed availability: No. FN-327.SNP.11:28723639 chr11:028723639 0 W/28723639-28723639 FN-327 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g47500 glycosyl hydrolase, putative, expressed SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN_N1-213-1.SNP.11:28725876 chr11:028725876 0 W/28725876-28725876 FN_N1-213-1 Single Base Substitution G-A Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2210-S.SNP.11:28727270 chr11:028727270 0 W/28727270-28727270 FN2210-S SNP C -> T AC=1;AN=190;BQB=0.293359;DP=3937;DP4=1955,1767,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000254001;MQB=4.21677e-05;MQSB=1.05777e-06;RPB=0.185361;SGB=36.1006;VDB=0.758614;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.11:28730010 chr11:028730010 0 W/28730010-28730010 FN-104 Single Base Substitution C-T INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. W22-2-1.SNP.11:28736760 chr11:028736760 0 W/28736760-28736760 W22-2-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-237.SNP.11:28737942 chr11:028737942 0 W/28737942-28737942 FN-237 Single Base Substitution T-C INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN3566-S.SNP.11:28739085 chr11:028739085 0 W/28739085-28739085 FN3566-S SNP T -> G AC=2;AN=188;BQB=0.971164;DP=2980;DP4=1376,1489,20,23;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=4.60469e-20;MQSB=0.285254;RPB=0.737985;SGB=189.821;VDB=0.382979;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.11:28759802 chr11:028759802 0 W/28759802-28759802 FN2109-S SNP A -> T AC=1;AN=168;BQB=0.998298;DP=1864;DP4=1215,620,1,8;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0;MQB=0.863151;MQSB=0.217485;RPB=0.476769;SGB=21.0249;VDB=0.138791;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y56N|301|LOC_Os11g47600|protein_coding|CODING|LOC_Os11g47600.1|1|1) FN928-S.SNP.11:28766332 chr11:028766332 0 W/28766332-28766332 FN928-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os11g47630 ZOS11-10 - C2H2 zinc finger protein, expressed SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN1585-S.SNP.11:28776847 chr11:028776847 0 W/28776847-28776847 FN1585-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1032-S.SNP.11:28777490 chr11:028777490 0 W/28777490-28777490 FN1032-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os11g47650 trp repressor/replication initiator, putative, expressed SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3869-S.SNP.11:28789263 chr11:028789263 0 W/28789263-28789263 FN3869-S SNP C -> T AC=1;AN=158;BQB=0.999017;DP=2340;DP4=936,1330,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0;MQB=1.89425e-06;MQSB=0.186085;RPB=0.330807;SGB=44.1818;VDB=0.183674;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.11:28803865 chr11:028803865 0 W/28803865-28803865 FN973-S Single Base Substitution A-G INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN400-S.SNP.11:28805099 chr11:028805099 0 W/28805099-28805099 FN400-S Single Base Substitution G-C INTRON HET SNo: 387, Mutant_ID: FN400-S, Generation: M2, Mutations: 53, Genes: 534, Seed availability: Yes. FN-315.SNP.11:28807153 chr11:028807153 0 W/28807153-28807153 FN-315 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g47760 DnaK family protein, putative, expressed SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN2617-S.SNP.11:28812048 chr11:028812048 0 W/28812048-28812048 FN2617-S SNP C -> T AC=1;AN=186;BQB=0.509625;DP=4111;DP4=1761,2113,19,12;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.05865e-18;MQSB=0.942594;RPB=0.839249;SGB=101.266;VDB=0.298363;EFF=UTR_3_PRIME(MODIFIER||25||1078|LOC_Os11g47780|protein_coding|CODING|LOC_Os11g47780.1|3|1) FN2566-S.SNP.11:28812322 chr11:028812322 0 W/28812322-28812322 FN2566-S SNP G -> A AC=1;AN=186;BQB=0.997815;DP=3951;DP4=2026,1703,8,3;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.37145e-07;MQSB=0.905323;RPB=0.795038;SGB=29.3637;VDB=0.00507322;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1040V|1078|LOC_Os11g47780|protein_coding|CODING|LOC_Os11g47780.1|2|1) FN1443-S.SNP.11:28829005 chr11:028829005 0 W/28829005-28829005 FN1443-S Single Base Substitution C-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3775-S.SNP.11:28839669 chr11:028839669 0 W/28839669-28839669 FN3775-S SNP G -> A AC=1;AN=190;BQB=0.711567;DP=3008;DP4=1480,1412,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=5.0572e-07;MQSB=0.720231;RPB=0.145338;SGB=71.8647;VDB=0.45726;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P370L|472|LOC_Os11g47820|protein_coding|CODING|LOC_Os11g47820.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P329L|431|LOC_Os11g47820|protein_coding|CODING|LOC_Os11g47820.2|3|1) FN-95.SNP.11:28840686 chr11:028840686 0 W/28840686-28840686 FN-95 Single Base Substitution T-A INTRON HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN-269.SNP.11:28843211 chr11:028843211 0 W/28843211-28843211 FN-269 Single Base Substitution G-T INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3383-S.SNP.11:28843211 chr11:028843211 0 W/28843211-28843211 FN3383-S SNP G -> T AC=2;AN=184;BQB=0.849364;DP=3193;DP4=1427,1571,18,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.46209e-13;MQSB=0.853931;RPB=0.353143;SGB=58.5801;VDB=0.983296;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.11:28843211 chr11:028843211 0 W/28843211-28843211 FN3454-S SNP G -> T AC=2;AN=184;BQB=0.81262;DP=2862;DP4=1316,1385,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.86149e-10;MQSB=0.999969;RPB=0.33962;SGB=35.884;VDB=0.298432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.11:28843211 chr11:028843211 0 W/28843211-28843211 FN3776-S SNP G -> T AC=2;AN=190;BQB=0.975652;DP=2701;DP4=1288,1243,9,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92276e-11;MQSB=0.987317;RPB=0.725587;SGB=36.4291;VDB=0.193538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.11:28850233 chr11:028850233 0 W/28850233-28850233 FN3746-S SNP C -> T AC=1;AN=190;BQB=0.616417;DP=2780;DP4=1316,1380,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.18287e-06;MQSB=0.997393;RPB=0.268276;SGB=21.8852;VDB=0.778467;EFF=INTRON(MODIFIER||||502|LOC_Os11g47830|protein_coding|CODING|LOC_Os11g47830.1|5|1),INTRON(MODIFIER||||477|LOC_Os11g47830|protein_coding|CODING|LOC_Os11g47830.2|5|1) FN3828-S.SNP.11:28858042 chr11:028858042 0 W/28858042-28858042 FN3828-S SNP G -> A AC=1;AN=190;BQB=0.999972;DP=2724;DP4=1466,1167,6,14;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.00220264;MQB=2.21601e-10;MQSB=0.108903;RPB=0.937263;SGB=11.8805;VDB=0.040727;EFF=INTERGENIC(MODIFIER||||||||||1) FN3559-S.SNP.11:28860513 chr11:028860513 0 W/28860513-28860513 FN3559-S SNP G -> A AC=1;AN=188;BQB=0.701839;DP=4054;DP4=1943,1975,15,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00049334;MQB=8.92189e-11;MQSB=0.135799;RPB=0.984741;SGB=108.042;VDB=0.146984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2451.SNP.11:28861106 chr11:028861106 0 W/28861106-28861106 FN2451 SNP C -> T AC=1;AN=200;BQB=0.675458;DP=3294;DP4=1376,1597,8,19;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.000607165;MQB=1.17654e-07;MQSB=0.859673;RPB=0.591974;SGB=87.1368;VDB=0.417805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R97W|211|LOC_Os11g47850|protein_coding|CODING|LOC_Os11g47850.1|1|1) FN1371-S.SNP.11:28863297 chr11:028863297 0 W/28863297-28863297 FN1371-S Single Base Substitution T-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2095-S.SNP.11:28863924 chr11:028863924 0 W/28863924-28863924 FN2095-S SNP A -> T AC=1;AN=168;BQB=0.761569;DP=2927;DP4=1211,1660,12,23;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.16242e-14;MQSB=0.970586;RPB=0.96854;SGB=-165.748;VDB=0.350405;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.11:28865441 chr11:028865441 0 W/28865441-28865441 W721-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN1302-S.SNP.11:28869484 chr11:028869484 0 W/28869484-28869484 FN1302-S Single Base Substitution C-A INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2171-S.SNP.11:28873968 chr11:028873968 0 W/28873968-28873968 FN2171-S SNP C -> T AC=1;AN=168;BQB=0.210141;DP=3856;DP4=1925,1873,14,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=7.10746e-08;MQSB=0.928852;RPB=0.937222;SGB=-126.487;VDB=0.907668;EFF=INTERGENIC(MODIFIER||||||||||1) FN953-S.SNP.11:28875326 chr11:028875326 0 W/28875326-28875326 FN953-S Single Base Substitution A-C INTERGENIC HET SNo: 859, Mutant_ID: FN953-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN1277-S.SNP.11:28878790 chr11:028878790 0 W/28878790-28878790 FN1277-S Single Base Substitution A-C INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN1324-S.SNP.11:28881740 chr11:028881740 0 W/28881740-28881740 FN1324-S Single Base Substitution T-G INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN1202-S.SNP.11:28882071 chr11:028882071 0 W/28882071-28882071 FN1202-S Single Base Substitution C-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN799-S.SNP.11:28892733 chr11:028892733 0 W/28892733-28892733 FN799-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os11g47900 SCARECROW, putative, expressed SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. W475-4-2.SNP.11:28913097 chr11:028913097 0 W/28913097-28913097 W475-4-2 Single Base Substitution T-C INTERGENIC HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN-103.SNP.11:28917805 chr11:028917805 0 W/28917805-28917805 FN-103 Single Base Substitution G-A INTERGENIC HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN671-S.SNP.11:28924645 chr11:028924645 0 W/28924645-28924645 FN671-S Single Base Substitution C-T INTERGENIC HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN420-S.SNP.11:28925320 chr11:028925320 0 W/28925320-28925320 FN420-S Single Base Substitution G-T INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2181-S.SNP.11:28927758 chr11:028927758 0 W/28927758-28927758 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.744222;DP=3525;DP4=1162,2192,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00283688;MQB=0.0218876;MQSB=1.4186e-06;RPB=0.811348;SGB=35.4339;VDB=0.802375;EFF=INTERGENIC(MODIFIER||||||||||1) FN708-S.SNP.11:28930657 chr11:028930657 0 W/28930657-28930657 FN708-S Single Base Substitution A-T INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN2611-S.SNP.11:28934238 chr11:028934238 0 W/28934238-28934238 FN2611-S SNP T -> G AC=1;AN=200;BQB=0.215272;DP=4672;DP4=2261,1951,22,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55093e-15;MQSB=0.910528;RPB=0.830475;SGB=-183.244;VDB=0.0710524;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.11:28934545 chr11:028934545 0 W/28934545-28934545 FN-121 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os11g47970 AAA-type ATPase family protein, putative, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN-121.SNP.11:28934546 chr11:028934546 0 W/28934546-28934546 FN-121 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os11g47970 AAA-type ATPase family protein, putative, expressed SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN907-S.SNP.11:28934903 chr11:028934903 0 W/28934903-28934903 FN907-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os11g47970 AAA-type ATPase family protein, putative, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN-143.SNP.11:28955954 chr11:028955954 0 W/28955954-28955954 FN-143 Single Base Substitution T-G INTRON HOMO SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN-372.SNP.11:28967956 chr11:028967956 0 W/28967956-28967956 FN-372 Single Base Substitution G-A INTERGENIC HET SNo: 361, Mutant_ID: FN-372, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2239-S.SNP.11:28986089 chr11:028986089 0 W/28986089-28986089 FN2239-S SNP C -> T AC=1;AN=190;BQB=0.79901;DP=4873;DP4=2024,2435,4,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.53135e-07;MQSB=0.483356;RPB=0.105931;SGB=-14.3297;VDB=0.0289153;EFF=INTERGENIC(MODIFIER||||||||||1) FN1755-S.SNP.11:28988097 chr11:028988097 0 W/28988097-28988097 FN1755-S SNP G -> A AC=1;AN=188;BQB=0.778968;DP=1652;DP4=911,693,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.11651e-06;MQSB=0.844223;RPB=0.857108;SGB=44.4357;VDB=0.870636;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D198N|363|LOC_Os11g48080|protein_coding|CODING|LOC_Os11g48080.1|1|1) FN1512-S.SNP.11:28995722 chr11:028995722 0 W/28995722-28995722 FN1512-S Single Base Substitution T-C INTRON HET SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN2687-S.SNP.11:29001206 chr11:029001206 0 W/29001206-29001206 FN2687-S SNP G -> T AC=1;AN=200;BQB=0.999718;DP=5069;DP4=2473,2288,10,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.495e-10;MQSB=0.912702;RPB=0.254165;SGB=11.0951;VDB=0.0411871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.11:29002681 chr11:029002681 0 W/29002681-29002681 FN3675-S SNP C -> T AC=2;AN=190;BQB=0.985762;DP=2629;DP4=1340,1143,10,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.10431e-11;MQSB=0.745772;RPB=0.845253;SGB=94.6341;VDB=0.816201;EFF=INTERGENIC(MODIFIER||||||||||1) FN985-S.SNP.11:29004369 chr11:029004369 0 W/29004369-29004369 FN985-S Single Base Substitution A-G INTERGENIC HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN4134-S.SNP.11:29008127 chr11:029008127 0 W/29008127-29008127 FN4134-S SNP T -> A AC=1;AN=182;BQB=0.847046;DP=2847;DP4=1285,1422,10,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.3631e-11;MQSB=0.935821;RPB=0.458909;SGB=75.6874;VDB=0.336387;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.11:29014955 chr11:029014955 0 W/29014955-29014955 FN2627-S SNP A -> G AC=1;AN=200;BQB=0.0322666;DP=4885;DP4=2386,2282,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.45986e-08;MQSB=0.871123;RPB=0.59434;SGB=-14.3206;VDB=0.659911 FN2749-S.SNP.12:21898 chr12:000021898 0 W/21898-21898 FN2749-S SNP C -> T AC=1;AN=200;BQB=0.998209;DP=6277;DP4=2914,2878,9,7;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.303489;MQB=0.457303;MQSB=1.5193e-09;RPB=0.701191;SGB=68.0801;VDB=0.717455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.12:47560 chr12:000047560 0 W/47560-47560 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.963866;DP=8066;DP4=3592,3773,32,28;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0808331;MQB=0.00101337;MQSB=0.00383692;RPB=0.98955;SGB=203.133;VDB=0.622813;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A688V|1465|LOC_Os12g01090|protein_coding|CODING|LOC_Os12g01090.1|3|1) FN3656-S.SNP.12:51495 chr12:000051495 0 W/51495-51495 FN3656-S SNP A -> G AC=1;AN=190;BQB=0.150345;DP=4753;DP4=2382,1719,9,26;HOB=5.54017e-05;ICB=0.000111386;MQ=37;MQ0F=0.0279823;MQB=0.0362728;MQSB=0.000699995;RPB=0.25164;SGB=-558.04;VDB=0.654933;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T93|153|LOC_Os12g01100|protein_coding|CODING|LOC_Os12g01100.1|3|1) FN3385-S.SNP.12:51939 chr12:000051939 0 W/51939-51939 FN3385-S SNP G -> A AC=1;AN=184;BQB=0.979536;DP=6308;DP4=3124,2900,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0309131;MQB=0.000679596;MQSB=0.000358806;RPB=0.973528;SGB=74.4875;VDB=0.29452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2310.SNP.12:53570 chr12:000053570 0 W/53570-53570 FN2310 SNP C -> T AC=1;AN=192;BQB=0.783274;DP=5299;DP4=1422,3549,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0422721;MQB=0.843102;MQSB=1.72839e-12;RPB=0.991113;SGB=50.4731;VDB=0.492397;EFF=INTRON(MODIFIER||||327|LOC_Os12g01110|protein_coding|CODING|LOC_Os12g01110.1|1|1) FN2554-S.SNP.12:57679 chr12:000057679 0 W/57679-57679 FN2554-S SNP T -> C AC=1;AN=198;BQB=0.954036;DP=8151;DP4=3883,3918,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.00527543;MQB=0.269922;MQSB=0;RPB=0.391108;SGB=44.9538;VDB=0.697088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.12:81955 chr12:000081955 0 W/81955-81955 FN2329 SNP C -> A AC=1;AN=192;BQB=0.0538664;DP=9020;DP4=4262,4320,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.0503326;MQB=1.76341e-06;MQSB=7.24009e-05;RPB=0.173277;SGB=-9.12519;VDB=0.739977;EFF=INTRON(MODIFIER||||921|LOC_Os12g01140|protein_coding|CODING|LOC_Os12g01140.1|2|1),INTRON(MODIFIER||||854|LOC_Os12g01140|protein_coding|CODING|LOC_Os12g01140.2|2|1),INTRON(MODIFIER||||854|LOC_Os12g01140|protein_coding|CODING|LOC_Os12g01140.3|2|1) FN812-S.SNP.12:108757 chr12:000108757 0 W/108757-108757 FN812-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g01190 RNA recognition motif containing protein, putative, expressed SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN-196.SNP.12:109759 chr12:000109759 0 W/109759-109759 FN-196 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g01190 RNA recognition motif containing protein, putative, expressed SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN-214.SNP.12:110534 chr12:000110534 0 W/110534-110534 FN-214 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g01190 RNA recognition motif containing protein, putative, expressed SNo: 213, Mutant_ID: FN-214, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2118-S.SNP.12:115558 chr12:000115558 0 W/115558-115558 FN2118-S SNP G -> T AC=1;AN=168;BQB=0.983057;DP=7545;DP4=3607,3863,17,25;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.51591e-15;MQSB=0.891664;RPB=0.241668;SGB=-237.157;VDB=0.815773;EFF=INTRON(MODIFIER||||921|LOC_Os12g01200|protein_coding|CODING|LOC_Os12g01200.1|11|1),INTRON(MODIFIER||||921|LOC_Os12g01200|protein_coding|CODING|LOC_Os12g01200.2|11|1),INTRON(MODIFIER||||921|LOC_Os12g01200|protein_coding|CODING|LOC_Os12g01200.3|10|1),INTRON(MODIFIER||||824|LOC_Os12g01200|protein_coding|CODING|LOC_Os12g01200.4|11|1) FN1440-S.SNP.12:116227 chr12:000116227 0 W/116227-116227 FN1440-S Single Base Substitution T-A INTRON HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN2241-S.SNP.12:120439 chr12:000120439 0 W/120439-120439 FN2241-S SNP C -> G AC=1;AN=190;BQB=0.882976;DP=8609;DP4=3884,4247,15,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000116158;MQB=7.78258e-16;MQSB=0.617664;RPB=0.98979;SGB=28.9731;VDB=0.583424;EFF=UTR_5_PRIME(MODIFIER||620||921|LOC_Os12g01200|protein_coding|CODING|LOC_Os12g01200.3|1|1) FN3656-S.SNP.12:130002 chr12:000130002 0 W/130002-130002 FN3656-S SNP G -> A AC=1;AN=190;BQB=0.285882;DP=2887;DP4=1435,1381,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.01939e-06;MQSB=0.993606;RPB=0.412025;SGB=62.7569;VDB=0.414899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S554L|814|LOC_Os12g01220|protein_coding|CODING|LOC_Os12g01220.1|9|1) FN3731-S.SNP.12:141092 chr12:000141092 0 W/141092-141092 FN3731-S SNP C -> A AC=2;AN=190;BQB=0.334901;DP=2256;DP4=981,1074,13,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.18546e-08;MQSB=0.431056;RPB=0.443139;SGB=112.85;VDB=0.745484;EFF=UTR_5_PRIME(MODIFIER||126||666|LOC_Os12g01240|protein_coding|CODING|LOC_Os12g01240.1|1|1) FN789-S.SNP.12:142178 chr12:000142178 0 W/142178-142178 FN789-S Single Base Substitution A-T INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2584-S.SNP.12:142298 chr12:000142298 0 W/142298-142298 FN2584-S SNP C -> T AC=1;AN=198;BQB=0.333498;DP=4048;DP4=1753,1991,10,22;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.87388e-16;MQSB=0.841498;RPB=0.43275;SGB=-4.90898;VDB=0.984524;EFF=INTERGENIC(MODIFIER||||||||||1) FN3452-S.SNP.12:143568 chr12:000143568 0 W/143568-143568 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.938841;DP=3324;DP4=2037,1199,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.68219e-05;MQSB=0.403701;RPB=0.583355;SGB=30.6558;VDB=0.478589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2279-S.SNP.12:147021 chr12:000147021 0 W/147021-147021 FN2279-S SNP C -> T AC=2;AN=190;BQB=0.999997;DP=4482;DP4=1965,2113,29,30;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.26449e-26;MQSB=0.549145;RPB=0.919284;SGB=263.128;VDB=0.0222383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.12:147115 chr12:000147115 0 W/147115-147115 FN1651-S Single Base Substitution C-T INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2663-S.SNP.12:168895 chr12:000168895 0 W/168895-168895 FN2663-S SNP G -> A AC=1;AN=200;BQB=0.303983;DP=4704;DP4=2226,2203,4,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25946e-08;MQSB=0.96818;RPB=0.772552;SGB=49.6594;VDB=0.383964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E605K|764|LOC_Os12g01290|protein_coding|CODING|LOC_Os12g01290.1|8|1) FN3919-S.SNP.12:173384 chr12:000173384 0 W/173384-173384 FN3919-S SNP T -> A AC=1;AN=158;BQB=0.977863;DP=2248;DP4=982,1065,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.41512e-05;MQSB=0.664209;RPB=0.646491;SGB=-18.3853;VDB=0.685471;EFF=INTERGENIC(MODIFIER||||||||||1) FN1002-S.SNP.12:175621 chr12:000175621 0 W/175621-175621 FN1002-S Single Base Substitution G-A INTERGENIC HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3443-S.SNP.12:179717 chr12:000179717 0 W/179717-179717 FN3443-S SNP C -> A AC=1;AN=184;BQB=0.952897;DP=2562;DP4=1220,1277,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01825e-09;MQSB=0.98404;RPB=0.550093;SGB=62.3078;VDB=0.183307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cAa|P60Q|1214|LOC_Os12g01320|protein_coding|CODING|LOC_Os12g01320.1|1|1) FN2216-S.SNP.12:190322 chr12:000190322 0 W/190322-190322 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.666878;DP=4734;DP4=2324,2190,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.12072e-09;MQSB=0.724484;RPB=0.724205;SGB=43.2083;VDB=0.51905;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.12:191889 chr12:000191889 0 W/191889-191889 FN3835-S SNP C -> T AC=1;AN=190;BQB=0.986664;DP=2565;DP4=1302,1165,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27679e-11;MQSB=0.947113;RPB=0.904226;SGB=31.3213;VDB=0.792765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D315N|614|LOC_Os12g01340|protein_coding|CODING|LOC_Os12g01340.1|2|1) FN1205-S.SNP.12:192529 chr12:000192529 0 W/192529-192529 FN1205-S Single Base Substitution C-T INTRON HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2373.SNP.12:197359 chr12:000197359 0 W/197359-197359 FN2373 SNP A -> G AC=2;AN=192;BQB=0.699377;DP=4736;DP4=2183,2076,27,26;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.51884e-24;MQSB=0.890731;RPB=0.936376;SGB=63.6713;VDB=0.998402;EFF=INTERGENIC(MODIFIER||||||||||1) FN1762-S.SNP.12:205314 chr12:000205314 0 W/205314-205314 FN1762-S SNP G -> C AC=2;AN=188;BQB=0.133807;DP=2172;DP4=1044,1089,8,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.53161e-06;MQSB=0.978863;RPB=0.924863;SGB=-114.435;VDB=0.665842;EFF=INTRON(MODIFIER||||363|LOC_Os12g01350|protein_coding|CODING|LOC_Os12g01350.1|1|1) FN3740-S.SNP.12:207633 chr12:000207633 0 W/207633-207633 FN3740-S SNP T -> C AC=2;AN=190;BQB=0.989329;DP=2881;DP4=1298,1478,6,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.02642e-11;MQSB=0.994472;RPB=0.991539;SGB=80.9724;VDB=0.37493;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.12:211649 chr12:000211649 0 W/211649-211649 FN-265 Single Base Substitution C-A UTR_3_PRIME HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1120-S.SNP.12:233988 chr12:000233988 0 W/233988-233988 FN1120-S Single Base Substitution T-A INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN995-S.SNP.12:236602 chr12:000236602 0 W/236602-236602 FN995-S Single Base Substitution C-A INTERGENIC HOMO SNo: 898, Mutant_ID: FN995-S, Generation: M2, Mutations: 62, Genes: 33, Seed availability: Yes. FN-336.SNP.12:247130 chr12:000247130 0 W/247130-247130 FN-336 Single Base Substitution C-T UTR_3_PRIME HET SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN2660-S.SNP.12:248452 chr12:000248452 0 W/248452-248452 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.445944;DP=4800;DP4=2363,2179,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000416667;MQB=2.89923e-08;MQSB=0.902078;RPB=0.454722;SGB=43.8747;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN2655-S.SNP.12:259254 chr12:000259254 0 W/259254-259254 FN2655-S SNP C -> G AC=1;AN=200;BQB=0.605206;DP=4930;DP4=2616,2034,5,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06708e-11;MQSB=0.789271;RPB=0.787555;SGB=58.2954;VDB=0.567279;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcG|A1662|1708|LOC_Os12g01390|protein_coding|CODING|LOC_Os12g01390.1|30|1) FN932-S.SNP.12:264676 chr12:000264676 0 W/264676-264676 FN932-S Single Base Substitution G-A INTRON HET SNo: 838, Mutant_ID: FN932-S, Generation: M2, Mutations: 41, Genes: 44, Seed availability: Yes. FN882-S.SNP.12:271596 chr12:000271596 0 W/271596-271596 FN882-S Single Base Substitution A-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN882-S.SNP.12:271597 chr12:000271597 0 W/271597-271597 FN882-S Single Base Substitution G-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2489.SNP.12:274250 chr12:000274250 0 W/274250-274250 FN2489 SNP T -> C AC=1;AN=200;BQB=0.485746;DP=4857;DP4=2307,1925,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205888;MQB=0.000213649;MQSB=0.00215333;RPB=0.942857;SGB=16.4591;VDB=0.519344;EFF=INTRON(MODIFIER||||929|LOC_Os12g01449|protein_coding|CODING|LOC_Os12g01449.1|8|1) FN978-S.SNP.12:277670 chr12:000277670 0 W/277670-277670 FN978-S Single Base Substitution G-T INTRON HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN3355-S.SNP.12:285128 chr12:000285128 0 W/285128-285128 FN3355-S SNP G -> A AC=1;AN=184;BQB=0.914166;DP=3282;DP4=1398,1761,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0255942;MQB=3.05235e-06;MQSB=4.26527e-09;RPB=0.13293;SGB=57.786;VDB=0.167284;EFF=SPLICE_SITE_REGION(LOW||||999|LOC_Os12g01470|protein_coding|CODING|LOC_Os12g01470.1|3|1),INTRON(MODIFIER||||999|LOC_Os12g01470|protein_coding|CODING|LOC_Os12g01470.1|3|1) FN807-S.SNP.12:287314 chr12:000287314 0 W/287314-287314 FN807-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN1270-S.SNP.12:291601 chr12:000291601 0 W/291601-291601 FN1270-S Single Base Substitution G-T INTERGENIC HET SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN982-S.SNP.12:292235 chr12:000292235 0 W/292235-292235 FN982-S Single Base Substitution T-C INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN1300-S.SNP.12:296212 chr12:000296212 0 W/296212-296212 FN1300-S Single Base Substitution G-T INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2583-S.SNP.12:303901 chr12:000303901 0 W/303901-303901 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.996544;DP=5064;DP4=2486,2377,10,7;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0576619;MQB=0.246689;MQSB=0;RPB=0.999542;SGB=29.4849;VDB=0.909096;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aCt|I209T|521|LOC_Os12g01500|protein_coding|CODING|LOC_Os12g01500.1|2|1) FN2779-S.SNP.12:304056 chr12:000304056 0 W/304056-304056 FN2779-S SNP T -> A AC=1;AN=198;BQB=0.888419;DP=4353;DP4=2120,1948,19,17;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00712153;MQB=1.06659e-15;MQSB=0.000770822;RPB=0.668813;SGB=38.0616;VDB=0.52259;EFF=INTRON(MODIFIER||||521|LOC_Os12g01500|protein_coding|CODING|LOC_Os12g01500.1|1|1) FN337-S.SNP.12:312314 chr12:000312314 0 W/312314-312314 FN337-S Single Base Substitution G-A INTERGENIC HET SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN3308-S.SNP.12:318131 chr12:000318131 0 W/318131-318131 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.727077;DP=3548;DP4=1720,1726,10,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000563698;MQB=3.20378e-07;MQSB=0.221669;RPB=0.933045;SGB=33.3622;VDB=0.86699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D43N|968|LOC_Os12g01520|protein_coding|CODING|LOC_Os12g01520.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D43N|968|LOC_Os12g01520|protein_coding|CODING|LOC_Os12g01520.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D43N|968|LOC_Os12g01520|protein_coding|CODING|LOC_Os12g01520.2|1|1) FN2178-S.SNP.12:319614 chr12:000319614 0 W/319614-319614 FN2178-S SNP C -> T AC=2;AN=168;BQB=0.990157;DP=2456;DP4=1368,1021,20,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.69757e-16;MQSB=0.950786;RPB=0.779721;SGB=-45.7659;VDB=0.366703;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.12:320291 chr12:000320291 0 W/320291-320291 FN1273-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1353-S.SNP.12:321715 chr12:000321715 0 W/321715-321715 FN1353-S Single Base Substitution T-A INTRON HET SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN2765-S.SNP.12:322860 chr12:000322860 0 W/322860-322860 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.886828;DP=4474;DP4=2267,1965,18,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21224e-15;MQSB=0.993947;RPB=0.851753;SGB=63.0809;VDB=0.655562;EFF=INTRON(MODIFIER||||263|LOC_Os12g01530|protein_coding|CODING|LOC_Os12g01530.1|1|1),INTRON(MODIFIER||||255|LOC_Os12g01530|protein_coding|CODING|LOC_Os12g01530.2|1|1),INTRON(MODIFIER||||191|LOC_Os12g01530|protein_coding|CODING|LOC_Os12g01530.3|1|1) FN3664-S.SNP.12:326506 chr12:000326506 0 W/326506-326506 FN3664-S SNP A -> T AC=2;AN=190;BQB=0.134209;DP=2908;DP4=1272,1526,14,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.42487e-18;MQSB=0.340454;RPB=0.0119081;SGB=96.5165;VDB=0.542945;EFF=INTRON(MODIFIER||||232|LOC_Os12g01540|protein_coding|CODING|LOC_Os12g01540.1|4|1) FN3664-S.SNP.12:326515 chr12:000326515 0 W/326515-326515 FN3664-S SNP A -> G AC=2;AN=190;BQB=0.990598;DP=2931;DP4=1225,1567,14,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.80982e-20;MQSB=0.323986;RPB=0.0207847;SGB=72.1834;VDB=0.29285;EFF=INTRON(MODIFIER||||232|LOC_Os12g01540|protein_coding|CODING|LOC_Os12g01540.1|4|1) FN4260-S.SNP.12:331331 chr12:000331331 0 W/331331-331331 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.880759;DP=2415;DP4=1209,1138,11,13;HOB=6.92042e-05;ICB=0.000139222;MQ=33;MQ0F=0.113872;MQB=0.777557;MQSB=2.54896e-42;RPB=0.443169;SGB=44.3104;VDB=0.760836;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R78|156|LOC_Os12g01550|protein_coding|CODING|LOC_Os12g01550.1|1|1) FN1195-S.SNP.12:343085 chr12:000343085 0 W/343085-343085 FN1195-S Single Base Substitution T-A INTERGENIC HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN3838-S.SNP.12:344706 chr12:000344706 0 W/344706-344706 FN3838-S SNP G -> C AC=1;AN=190;BQB=0.875724;DP=2563;DP4=1251,1186,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000390168;MQB=2.62227e-06;MQSB=1.07572e-05;RPB=0.131918;SGB=53.6492;VDB=0.824937;EFF=INTERGENIC(MODIFIER||||||||||1) FN973-S.SNP.12:355590 chr12:000355590 0 W/355590-355590 FN973-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN3793-S.SNP.12:359576 chr12:000359576 0 W/359576-359576 FN3793-S SNP A -> T AC=1;AN=190;BQB=0.871476;DP=2701;DP4=1279,1303,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.60183e-09;MQSB=0.666984;RPB=0.801746;SGB=26.2136;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.12:368680 chr12:000368680 0 W/368680-368680 FN4111-S SNP C -> G AC=1;AN=182;BQB=0.535385;DP=2533;DP4=1110,1077,12,16;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000394789;MQB=1.49832e-10;MQSB=0.999313;RPB=0.726187;SGB=88.2906;VDB=0.595243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3695-S.SNP.12:373672 chr12:000373672 0 W/373672-373672 FN3695-S SNP G -> A AC=2;AN=190;BQB=0.998536;DP=1643;DP4=773,756,8,10;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.54849e-07;MQSB=0.0102049;RPB=0.214644;SGB=76.4186;VDB=0.0857738;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.12:376874 chr12:000376874 0 W/376874-376874 FN1639-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g01620 expressed protein SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN769-S.SNP.12:377180 chr12:000377180 0 W/377180-377180 FN769-S Single Base Substitution T-C INTRON HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN2621-S.SNP.12:387428 chr12:000387428 0 W/387428-387428 FN2621-S SNP A -> G AC=1;AN=200;BQB=0.951033;DP=5014;DP4=2394,2454,10,12;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.304747;MQB=0.897057;MQSB=0.579808;RPB=0.596417;SGB=69.1109;VDB=0.646704;EFF=INTRON(MODIFIER||||1128|LOC_Os12g01640|protein_coding|CODING|LOC_Os12g01640.1|2|1) FN2621-S.SNP.12:387429 chr12:000387429 0 W/387429-387429 FN2621-S SNP A -> T AC=1;AN=200;BQB=0.616247;DP=5017;DP4=2400,2417,10,11;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.303967;MQB=0.830705;MQSB=0.368084;RPB=0.410878;SGB=65.5058;VDB=0.544338;EFF=INTRON(MODIFIER||||1128|LOC_Os12g01640|protein_coding|CODING|LOC_Os12g01640.1|2|1) FN3282-S.SNP.12:391359 chr12:000391359 0 W/391359-391359 FN3282-S SNP T -> C AC=1;AN=184;BQB=0.992665;DP=3031;DP4=1541,1406,14,5;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.0534477;MQB=0.871313;MQSB=0;RPB=0.993664;SGB=56.8786;VDB=0.828139;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T873|1034|LOC_Os12g01650|protein_coding|CODING|LOC_Os12g01650.1|3|1) FN919-S.SNP.12:398810 chr12:000398810 0 W/398810-398810 FN919-S Single Base Substitution C-A INTERGENIC HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2422.SNP.12:399222 chr12:000399222 0 W/399222-399222 FN2422 SNP C -> A AC=2;AN=200;BQB=0.992983;DP=4290;DP4=2174,1839,19,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47563e-17;MQSB=0.453462;RPB=0.926656;SGB=155.578;VDB=0.35915;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.12:415462 chr12:000415462 0 W/415462-415462 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN-168.SNP.12:426311 chr12:000426311 0 W/426311-426311 FN-168 Single Base Substitution G-A INTERGENIC HOMO SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1015-S.SNP.12:426311 chr12:000426311 0 W/426311-426311 FN1015-S Single Base Substitution G-A INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3551-S.SNP.12:426311 chr12:000426311 0 W/426311-426311 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.718781;DP=3183;DP4=1366,1578,9,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.38015e-11;MQSB=0.935672;RPB=0.201222;SGB=14.798;VDB=0.764255;EFF=INTERGENIC(MODIFIER||||||||||1) FN937-S.SNP.12:426311 chr12:000426311 0 W/426311-426311 FN937-S Single Base Substitution G-A INTERGENIC HOMO SNo: 843, Mutant_ID: FN937-S, Generation: M2, Mutations: 63, Genes: 45, Seed availability: Yes. FN_822-5-1.SNP.12:426311 chr12:000426311 0 W/426311-426311 FN_822-5-1 Single Base Substitution G-A HET SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1040-S.SNP.12:428638 chr12:000428638 0 W/428638-428638 FN1040-S Single Base Substitution A-G INTERGENIC HOMO SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN4147-S.SNP.12:446617 chr12:000446617 0 W/446617-446617 FN4147-S SNP A -> T AC=2;AN=170;BQB=0.794194;DP=2272;DP4=1157,1058,13,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.19684e-12;MQSB=0.99758;RPB=0.878832;SGB=96.7413;VDB=0.751842;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.12:448279 chr12:000448279 0 W/448279-448279 FN2089-S SNP G -> A AC=1;AN=168;BQB=0.331414;DP=3945;DP4=1999,1908,12,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.79647e-15;MQSB=0.985329;RPB=0.323552;SGB=-11.4952;VDB=0.848935;EFF=INTERGENIC(MODIFIER||||||||||1) FN789-S.SNP.12:452964 chr12:000452964 0 W/452964-452964 FN789-S Single Base Substitution C-T INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2577-S.SNP.12:453869 chr12:000453869 0 W/453869-453869 FN2577-S SNP G -> A AC=2;AN=198;BQB=0.592228;DP=4239;DP4=2121,1810,18,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.67671e-15;MQSB=0.953176;RPB=0.96703;SGB=34.8713;VDB=0.548706;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.12:456953 chr12:000456953 0 W/456953-456953 FN-410 Single Base Substitution G-C INTERGENIC HOMO SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN410-S.SNP.12:456953 chr12:000456953 0 W/456953-456953 FN410-S Single Base Substitution G-C INTERGENIC HOMO SNo: 407, Mutant_ID: FN410-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN2784-S.SNP.12:458063 chr12:000458063 0 W/458063-458063 FN2784-S SNP G -> T AC=1;AN=198;BQB=0.461751;DP=4380;DP4=2084,2021,10,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.79626e-19;MQSB=0.839287;RPB=0.997904;SGB=34.8713;VDB=0.426048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.12:461361 chr12:000461361 0 W/461361-461361 FN-235 Single Base Substitution A-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1379-S.SNP.12:461388 chr12:000461388 0 W/461388-461388 FN1379-S Single Base Substitution A-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN3511-S.SNP.12:470711 chr12:000470711 0 W/470711-470711 FN3511-S SNP A -> T AC=1;AN=188;BQB=0.963446;DP=2852;DP4=1338,1444,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.42799e-08;MQSB=0.935896;RPB=0.819862;SGB=32.441;VDB=0.82583;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtT|V198|476|LOC_Os12g01770|protein_coding|CODING|LOC_Os12g01770.1|2|1) FN2460.SNP.12:478850 chr12:000478850 0 W/478850-478850 FN2460 SNP G -> T AC=2;AN=200;BQB=0.14762;DP=4563;DP4=2172,2151,18,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.47803e-15;MQSB=0.997945;RPB=0.270527;SGB=30.3571;VDB=0.674314;EFF=INTRON(MODIFIER||||1328|LOC_Os12g01790|protein_coding|CODING|LOC_Os12g01790.1|1|1) FN2593-S.SNP.12:485299 chr12:000485299 0 W/485299-485299 FN2593-S SNP T -> C AC=1;AN=198;BQB=0.926379;DP=4284;DP4=1993,2087,21,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.90996e-19;MQSB=0.249535;RPB=0.498416;SGB=182.807;VDB=0.738662;EFF=INTRON(MODIFIER||||437|LOC_Os12g01800|protein_coding|CODING|LOC_Os12g01800.1|3|1) FN4136-S.SNP.12:487884 chr12:000487884 0 W/487884-487884 FN4136-S SNP T -> C AC=1;AN=170;BQB=0.877052;DP=2375;DP4=1057,1129,5,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.40653e-06;MQSB=0.822344;RPB=0.614239;SGB=12.556;VDB=0.381414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1261-S.SNP.12:489982 chr12:000489982 0 W/489982-489982 FN1261-S Single Base Substitution C-T INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN1256-S.SNP.12:493306 chr12:000493306 0 W/493306-493306 FN1256-S Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN1742-S.SNP.12:496706 chr12:000496706 0 W/496706-496706 FN1742-S SNP T -> G AC=1;AN=188;BQB=0.816532;DP=3927;DP4=1961,1923,13,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.38253e-15;MQSB=0.930129;RPB=0.286547;SGB=-77.9263;VDB=0.725469;EFF=UTR_3_PRIME(MODIFIER||3585||645|LOC_Os12g01850|protein_coding|CODING|LOC_Os12g01850.1|2|1),INTRON(MODIFIER||||235|LOC_Os12g01830|protein_coding|CODING|LOC_Os12g01830.1|2|1) FN2386.SNP.12:498911 chr12:000498911 0 W/498911-498911 FN2386 SNP G -> T AC=1;AN=192;BQB=0.947123;DP=3570;DP4=2410,902,14,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.50919e-12;MQSB=5.56051e-06;RPB=0.875196;SGB=82.5522;VDB=0.370407;EFF=INTRON(MODIFIER||||645|LOC_Os12g01850|protein_coding|CODING|LOC_Os12g01850.1|1|1),INTRON(MODIFIER||||235|LOC_Os12g01830|protein_coding|CODING|LOC_Os12g01830.1|7|1) FN2488.SNP.12:499998 chr12:000499998 0 W/499998-499998 FN2488 SNP A -> T AC=2;AN=200;BQB=0.938915;DP=5006;DP4=2544,2233,27,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.03579e-24;MQSB=0.787323;RPB=0.96058;SGB=162.845;VDB=0.382879;EFF=UTR_3_PRIME(MODIFIER||293||645|LOC_Os12g01850|protein_coding|CODING|LOC_Os12g01850.1|1|1) FN2274-S.SNP.12:506079 chr12:000506079 0 W/506079-506079 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.381535;DP=5102;DP4=2389,2406,23,10;HOB=5.54017e-05;ICB=0.000111386;MQ=11;MQ0F=0.585261;MQB=0.00425958;MQSB=0;RPB=0.643973;SGB=-118.114;VDB=0.174442;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N661|1110|LOC_Os12g01860|protein_coding|CODING|LOC_Os12g01860.1|1|1) FN876-S.SNP.12:516649 chr12:000516649 0 W/516649-516649 FN876-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2532-S.SNP.12:530904 chr12:000530904 0 W/530904-530904 FN2532-S SNP C -> A AC=1;AN=198;BQB=0.999086;DP=4233;DP4=1997,2016,13,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.47589e-14;MQSB=0.991636;RPB=0.929085;SGB=47.5102;VDB=0.678627;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.12:541264 chr12:000541264 0 W/541264-541264 FN378-S Single Base Substitution C-A INTERGENIC HET SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN3512-S.SNP.12:542962 chr12:000542962 0 W/542962-542962 FN3512-S SNP T -> C AC=1;AN=188;BQB=0.980079;DP=2491;DP4=1139,1289,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00240867;MQB=4.57858e-06;MQSB=0.99836;RPB=0.579317;SGB=44.4357;VDB=0.786011;EFF=INTRON(MODIFIER||||1359|LOC_Os12g01922|protein_coding|CODING|LOC_Os12g01922.1|19|1) FN2174-S.SNP.12:551690 chr12:000551690 0 W/551690-551690 FN2174-S SNP C -> T AC=1;AN=168;BQB=0.0108114;DP=3788;DP4=2193,1547,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000141732;MQSB=0.843679;RPB=0.990574;SGB=-82.6471;VDB=0.926411;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.12:559876 chr12:000559876 0 W/559876-559876 FN795-S Single Base Substitution A-C INTRON HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN-236.SNP.12:578624 chr12:000578624 0 W/578624-578624 FN-236 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g01970 F-box family protein, putative, expressed SNo: 235, Mutant_ID: FN-236, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN-289.SNP.12:591618 chr12:000591618 0 W/591618-591618 FN-289 Single Base Substitution G-A INTERGENIC HOMO SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN968-S.SNP.12:599854 chr12:000599854 0 W/599854-599854 FN968-S Single Base Substitution C-T INTRON HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3815-S.SNP.12:601623 chr12:000601623 0 W/601623-601623 FN3815-S SNP T -> A AC=1;AN=190;BQB=0.722166;DP=2835;DP4=1312,1400,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000569306;MQSB=0.697693;RPB=0.962394;SGB=35.4339;VDB=0.605799;EFF=INTRON(MODIFIER||||160|LOC_Os12g02020|protein_coding|CODING|LOC_Os12g02020.1|2|1) FN2595-S.SNP.12:617940 chr12:000617940 0 W/617940-617940 FN2595-S SNP T -> C AC=1;AN=198;BQB=0.986691;DP=4148;DP4=2000,1869,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00024108;MQB=4.59005e-10;MQSB=0.953086;RPB=0.872945;SGB=81.7147;VDB=0.877721;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.12:618709 chr12:000618709 0 W/618709-618709 FN1240-S Single Base Substitution G-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3391-S.SNP.12:618709 chr12:000618709 0 W/618709-618709 FN3391-S SNP G -> T AC=2;AN=184;BQB=0.928971;DP=2703;DP4=1243,1316,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.09629e-15;MQSB=0.996426;RPB=0.951581;SGB=121.091;VDB=0.522234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1639-S.SNP.12:619279 chr12:000619279 0 W/619279-619279 FN1639-S Single Base Substitution A-T INTERGENIC HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN1483-S.SNP.12:620137 chr12:000620137 0 W/620137-620137 FN1483-S Single Base Substitution G-T INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1483-S.SNP.12:621440 chr12:000621440 0 W/621440-621440 FN1483-S Single Base Substitution G-C INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN1483-S.SNP.12:621567 chr12:000621567 0 W/621567-621567 FN1483-S Single Base Substitution G-A INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN2454.SNP.12:627940 chr12:000627940 0 W/627940-627940 FN2454 SNP G -> T AC=1;AN=200;BQB=0.0526494;DP=4270;DP4=1875,2083,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000276798;MQSB=0.168144;RPB=0.86274;SGB=58.8698;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2395.SNP.12:631521 chr12:000631521 0 W/631521-631521 FN2395 SNP G -> A AC=1;AN=200;BQB=0.422636;DP=4356;DP4=1824,2248,14,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.16181e-16;MQSB=0.974075;RPB=0.938273;SGB=60.747;VDB=0.737455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3422-S.SNP.12:633816 chr12:000633816 0 W/633816-633816 FN3422-S SNP A -> C AC=1;AN=184;BQB=0.900281;DP=2394;DP4=1226,1101,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.5865e-07;MQSB=0.978029;RPB=0.517107;SGB=53.2642;VDB=0.846243;EFF=INTRON(MODIFIER||||499|LOC_Os12g02100|protein_coding|CODING|LOC_Os12g02100.1|3|1),INTRON(MODIFIER||||456|LOC_Os12g02100|protein_coding|CODING|LOC_Os12g02100.2|2|1) FN266-S.SNP.12:642688 chr12:000642688 0 W/642688-642688 FN266-S Single Base Substitution C-A INTRON HOMO SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3421-S.SNP.12:642936 chr12:000642936 0 W/642936-642936 FN3421-S SNP A -> G AC=2;AN=184;BQB=0.821006;DP=2682;DP4=1332,1212,18,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.31693e-13;MQSB=0.922822;RPB=0.994789;SGB=88.5747;VDB=0.702028;EFF=INTRON(MODIFIER||||271|LOC_Os12g02120|protein_coding|CODING|LOC_Os12g02120.1|1|1),INTRON(MODIFIER||||271|LOC_Os12g02120|protein_coding|CODING|LOC_Os12g02120.2|3|1) FN416-S.SNP.12:648899 chr12:000648899 0 W/648899-648899 FN416-S Single Base Substitution G-A INTRON HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN3391-S.SNP.12:650148 chr12:000650148 0 W/650148-650148 FN3391-S SNP G -> A AC=1;AN=184;BQB=0.928132;DP=2551;DP4=1254,1215,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000301872;MQSB=0.998437;RPB=0.934054;SGB=18.1394;VDB=0.566336;EFF=INTRON(MODIFIER||||806|LOC_Os12g02130|protein_coding|CODING|LOC_Os12g02130.1|2|1) FN2621-S.SNP.12:652456 chr12:000652456 0 W/652456-652456 FN2621-S SNP A -> T AC=1;AN=200;BQB=0.574639;DP=5046;DP4=2502,2373,14,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74143e-15;MQSB=0.970266;RPB=0.990005;SGB=109.527;VDB=0.185042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.12:652536 chr12:000652536 0 W/652536-652536 FN3713-S SNP C -> A AC=1;AN=190;BQB=0.912013;DP=2921;DP4=1574,1212,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.60963e-06;MQSB=0.917329;RPB=0.678825;SGB=32.5467;VDB=0.219635;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.12:653386 chr12:000653386 0 W/653386-653386 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.849037;DP=3208;DP4=1514,1614,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.0465e-10;MQSB=0.887303;RPB=0.541413;SGB=66.8296;VDB=0.627846;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G43|100|LOC_Os12g02140|protein_coding|CODING|LOC_Os12g02140.1|1|1) FN2659-S.SNP.12:654640 chr12:000654640 0 W/654640-654640 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.412393;DP=4361;DP4=2348,1753,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.91249e-07;MQSB=0.988138;RPB=0.97876;SGB=36.6644;VDB=0.659814;EFF=INTERGENIC(MODIFIER||||||||||1) FN230-S.SNP.12:662554 chr12:000662554 0 W/662554-662554 FN230-S Single Base Substitution G-A INTERGENIC HET SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN436-S.SNP.12:665897 chr12:000665897 0 W/665897-665897 FN436-S Single Base Substitution G-A INTERGENIC HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN2691-S.SNP.12:672240 chr12:000672240 0 W/672240-672240 FN2691-S SNP C -> A AC=2;AN=200;BQB=0.809626;DP=4804;DP4=2248,2244,26,34;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.68434e-34;MQSB=0.997424;RPB=0.731818;SGB=141.507;VDB=0.583698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2221-S.SNP.12:674271 chr12:000674271 0 W/674271-674271 FN2221-S SNP G -> A AC=1;AN=190;BQB=0.952532;DP=4444;DP4=2167,2020,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.98218e-09;MQSB=0.615752;RPB=0.515797;SGB=60.9777;VDB=0.923365;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L361|423|LOC_Os12g02180|protein_coding|CODING|LOC_Os12g02180.1|3|1) FN-303.SNP.12:675513 chr12:000675513 0 W/675513-675513 FN-303 Single Base Substitution T-A INTRON HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN3440-S.SNP.12:687737 chr12:000687737 0 W/687737-687737 FN3440-S SNP G -> A AC=2;AN=184;BQB=0.841544;DP=2702;DP4=1317,1095,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.71973e-15;MQSB=0.245659;RPB=0.837381;SGB=-41.0125;VDB=0.83639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.12:688048 chr12:000688048 0 W/688048-688048 FN1008-S Single Base Substitution A-C INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN712-S.SNP.12:693130 chr12:000693130 0 W/693130-693130 FN712-S Single Base Substitution C-T INTRON HOMO SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN3432-S.SNP.12:693881 chr12:000693881 0 W/693881-693881 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.339995;DP=2917;DP4=1635,1208,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.9823e-11;MQSB=0.927218;RPB=0.902428;SGB=25.7969;VDB=0.571893;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y234|423|LOC_Os12g02230|protein_coding|CODING|LOC_Os12g02230.1|2|1) FN3432-S.SNP.12:693882 chr12:000693882 0 W/693882-693882 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.821063;DP=2931;DP4=1641,1214,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42984e-09;MQSB=0.942756;RPB=0.824553;SGB=57.786;VDB=0.6178;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L235|423|LOC_Os12g02230|protein_coding|CODING|LOC_Os12g02230.1|2|1) FN2115-S.SNP.12:696493 chr12:000696493 0 W/696493-696493 FN2115-S SNP T -> G AC=1;AN=168;BQB=0.933046;DP=3531;DP4=1869,1617,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00113282;MQB=1.10575e-05;MQSB=0;RPB=0.468262;SGB=9.91396;VDB=0.0831003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.12:710254 chr12:000710254 0 W/710254-710254 FN1384-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN630-S.SNP.12:714374 chr12:000714374 0 W/714374-714374 FN630-S Single Base Substitution T-A INTRON HOMO SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN-356.SNP.12:718958 chr12:000718958 0 W/718958-718958 FN-356 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-356.SNP.12:718963 chr12:000718963 0 W/718963-718963 FN-356 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g02280 pentatricopeptide, putative, expressed SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN4020-S.SNP.12:722962 chr12:000722962 0 W/722962-722962 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.273092;DP=2400;DP4=1109,1193,10,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.47282e-10;MQSB=0.922341;RPB=0.713503;SGB=34.3388;VDB=0.266887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.12:737098 chr12:000737098 0 W/737098-737098 FN1451-S Single Base Substitution G-A INTERGENIC HET SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3784-S.SNP.12:739121 chr12:000739121 0 W/739121-739121 FN3784-S SNP G -> A AC=1;AN=190;BQB=0.954662;DP=2756;DP4=1363,1293,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.01107e-06;MQSB=0.915479;RPB=0.984222;SGB=35.4339;VDB=0.513454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3368-S.SNP.12:744949 chr12:000744949 0 W/744949-744949 FN3368-S SNP T -> C AC=1;AN=184;BQB=0.95995;DP=2566;DP4=1303,1180,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.62484e-08;MQSB=0.933828;RPB=0.896336;SGB=53.2642;VDB=0.102551;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.12:765820 chr12:000765820 0 W/765820-765820 FN2542-S SNP G -> A AC=1;AN=198;BQB=0.261119;DP=4350;DP4=2134,1889,15,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07736e-10;MQSB=0.995059;RPB=0.32274;SGB=18.9201;VDB=0.0179949;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.12:767351 chr12:000767351 0 W/767351-767351 FN483-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g02370 chalcone--flavonone isomerase, putative, expressed SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN791-S.SNP.12:768579 chr12:000768579 0 W/768579-768579 FN791-S Single Base Substitution A-T INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN791-S.SNP.12:768580 chr12:000768580 0 W/768580-768580 FN791-S Single Base Substitution A-T INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN489-S.SNP.12:780328 chr12:000780328 0 W/780328-780328 FN489-S Single Base Substitution A-G INTRON HET SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN931-S.SNP.12:788290 chr12:000788290 0 W/788290-788290 FN931-S Single Base Substitution C-A INTERGENIC HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2355.SNP.12:792336 chr12:000792336 0 W/792336-792336 FN2355 SNP C -> T AC=1;AN=192;BQB=0.99633;DP=5504;DP4=2597,2472,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.4765e-19;MQSB=0.815257;RPB=0.550878;SGB=114.631;VDB=0.930054;EFF=INTERGENIC(MODIFIER||||||||||1) FN-161.SNP.12:792719 chr12:000792719 0 W/792719-792719 FN-161 Single Base Substitution C-T INTERGENIC HOMO SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN-89.SNP.12:799130 chr12:000799130 0 W/799130-799130 FN-89 Single Base Substitution T-G INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN-124.SNP.12:800310 chr12:000800310 0 W/800310-800310 FN-124 Single Base Substitution C-T INTERGENIC HOMO SNo: 124, Mutant_ID: FN-124, Generation: M2, Mutations: 40, Genes: 9, Seed availability: Yes. FN2328.SNP.12:801612 chr12:000801612 0 W/801612-801612 FN2328 SNP G -> A AC=2;AN=192;BQB=0.701494;DP=4477;DP4=2177,1762,27,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.70422e-18;MQSB=0.000163598;RPB=0.98303;SGB=57.4139;VDB=0.923683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1150-S.SNP.12:808718 chr12:000808718 0 W/808718-808718 FN1150-S Single Base Substitution G-T INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2179-S.SNP.12:839836 chr12:000839836 0 W/839836-839836 FN2179-S SNP G -> A AC=1;AN=168;BQB=0.0608783;DP=2840;DP4=1351,1433,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=37;MQ0F=0.0394366;MQB=0.77195;MQSB=0.95949;RPB=0.87589;SGB=-16.2342;VDB=0.82346;EFF=INTERGENIC(MODIFIER||||||||||1) FN887-S.SNP.12:840649 chr12:000840649 0 W/840649-840649 FN887-S Single Base Substitution C-T INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN1116-S.SNP.12:842859 chr12:000842859 0 W/842859-842859 FN1116-S Single Base Substitution A-T INTERGENIC HET SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN-129.SNP.12:843619 chr12:000843619 0 W/843619-843619 FN-129 Single Base Substitution C-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN2593-S.SNP.12:844707 chr12:000844707 0 W/844707-844707 FN2593-S SNP A -> G AC=1;AN=198;BQB=0.686601;DP=4637;DP4=2231,2230,15,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.00204e-15;MQSB=0.451086;RPB=0.267085;SGB=101.266;VDB=0.550327;EFF=UTR_3_PRIME(MODIFIER||113||865|LOC_Os12g02490|protein_coding|CODING|LOC_Os12g02490.1|3|1) FN3549-S.SNP.12:850037 chr12:000850037 0 W/850037-850037 FN3549-S SNP A -> T AC=1;AN=188;BQB=0.984661;DP=2560;DP4=1196,1302,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.96998e-05;MQSB=0.899597;RPB=0.364339;SGB=26.2637;VDB=0.194875;EFF=INTERGENIC(MODIFIER||||||||||1) FN2126-S.SNP.12:857305 chr12:000857305 0 W/857305-857305 FN2126-S SNP C -> A AC=2;AN=168;BQB=0.599032;DP=3836;DP4=1826,1951,19,22;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.163973;MQB=0.309141;MQSB=0;RPB=0.884851;SGB=-50.8886;VDB=0.109716;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T146N|252|LOC_Os12g02510|protein_coding|CODING|LOC_Os12g02510.1|3|1) FN-65.SNP.12:858300 chr12:000858300 0 W/858300-858300 FN-65 Single Base Substitution A-T UTR_3_PRIME HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN498-S.SNP.12:864428 chr12:000864428 0 W/864428-864428 FN498-S Single Base Substitution T-C INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1338-S.SNP.12:874106 chr12:000874106 0 W/874106-874106 FN1338-S Single Base Substitution C-T INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN3885-S.SNP.12:885166 chr12:000885166 0 W/885166-885166 FN3885-S SNP C -> T AC=1;AN=158;BQB=0.992919;DP=2517;DP4=1230,1185,13,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.71316e-11;MQSB=0.998511;RPB=0.999949;SGB=50.9207;VDB=0.217618;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.12:889715 chr12:000889715 0 W/889715-889715 FN3407-S SNP C -> A AC=1;AN=184;BQB=0.956791;DP=2621;DP4=1264,1292,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.74014e-06;MQSB=0.288266;RPB=0.815149;SGB=39.699;VDB=0.474122;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A112S|250|LOC_Os12g02570|protein_coding|CODING|LOC_Os12g02570.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A93S|231|LOC_Os12g02570|protein_coding|CODING|LOC_Os12g02570.2|3|1) 701-3.SNP.12:908036 chr12:000908036 0 W/908036-908036 701-3 Single Base Substitution G-A INTRON HOMO SNo: 1437, Mutant_ID: 701-3, Generation: M2, Mutations: 51, Genes: 50, Seed availability: Yes. FN1356-S.SNP.12:908036 chr12:000908036 0 W/908036-908036 FN1356-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1442-S.SNP.12:908036 chr12:000908036 0 W/908036-908036 FN1442-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN3343-S.SNP.12:908036 chr12:000908036 0 W/908036-908036 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.829576;DP=2875;DP4=1519,1260,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.53117e-07;MQSB=0.998572;RPB=0.935321;SGB=49.835;VDB=0.450106;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C374Y|499|LOC_Os12g02620|protein_coding|CODING|LOC_Os12g02620.1|2|1),INTRON(MODIFIER||||523|LOC_Os12g02660|protein_coding|CODING|LOC_Os12g02660.2|9|1) FN1307-S.SNP.12:927296 chr12:000927296 0 W/927296-927296 FN1307-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g02660 expressed protein SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN-189.SNP.12:928467 chr12:000928467 0 W/928467-928467 FN-189 Single Base Substitution A-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN2314.SNP.12:930404 chr12:000930404 0 W/930404-930404 FN2314 SNP C -> T AC=1;AN=192;BQB=0.557157;DP=4479;DP4=2269,1927,7,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.95235e-05;MQSB=0.92783;RPB=0.821122;SGB=1.09742;VDB=0.799441;EFF=INTRON(MODIFIER||||552|LOC_Os12g02670|protein_coding|CODING|LOC_Os12g02670.1|1|1) FN3779-S.SNP.12:941246 chr12:000941246 0 W/941246-941246 FN3779-S SNP G -> A AC=2;AN=190;BQB=0.971317;DP=2940;DP4=1375,1419,17,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.36483e-17;MQSB=0.996871;RPB=0.87011;SGB=92.9626;VDB=0.0185156;EFF=UTR_5_PRIME(MODIFIER||1677||241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.1|1|1),INTRON(MODIFIER||||241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.2|1|1),INTRON(MODIFIER||||241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.3|1|1),INTRON(MODIFIER||||241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.4|1|1) FN1422-S.SNP.12:942259 chr12:000942259 0 W/942259-942259 FN1422-S Single Base Substitution C-A INTRON HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN1416-S.SNP.12:942621 chr12:000942621 0 W/942621-942621 FN1416-S Single Base Substitution C-T INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN4275-S.SNP.12:943635 chr12:000943635 0 W/943635-943635 FN4275-S SNP A -> G AC=2;AN=170;BQB=0.996838;DP=2763;DP4=1339,1277,18,15;HOB=0.0232526;ICB=0.494188;MQ=44;MQ0F=0.000361925;MQB=0.00106532;MQSB=0.105498;RPB=0.190391;SGB=103.731;VDB=0.619396;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K238R|241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K238R|241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K238R|241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.3|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aGa|K238R|241|LOC_Os12g02690|protein_coding|CODING|LOC_Os12g02690.4|2|1) FN3670-S.SNP.12:947664 chr12:000947664 0 W/947664-947664 FN3670-S SNP T -> C AC=2;AN=190;BQB=0.999649;DP=2770;DP4=1299,1356,10,8;HOB=0.020831;ICB=0.494793;MQ=42;MQ0F=0.0259928;MQB=0.0230957;MQSB=0.95071;RPB=0.913813;SGB=53.8699;VDB=0.861718;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cGc|H648R|708|LOC_Os12g02710|protein_coding|CODING|LOC_Os12g02710.1|4|1) FN3482-S.SNP.12:947669 chr12:000947669 0 W/947669-947669 FN3482-S SNP G -> A AC=1;AN=184;BQB=0.934175;DP=2581;DP4=1341,1176,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0232468;MQB=0.128019;MQSB=0.983786;RPB=0.99167;SGB=35.1773;VDB=0.923209;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S646|708|LOC_Os12g02710|protein_coding|CODING|LOC_Os12g02710.1|4|1) FN3710-S.SNP.12:951980 chr12:000951980 0 W/951980-951980 FN3710-S SNP A -> G AC=1;AN=190;BQB=0.872062;DP=2695;DP4=1271,1286,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000182949;MQSB=0.999685;RPB=0.97303;SGB=25.439;VDB=0.176079;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.12:960147 chr12:000960147 0 W/960147-960147 FN524-S Single Base Substitution C-T INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN2617-S.SNP.12:962564 chr12:000962564 0 W/962564-962564 FN2617-S SNP G -> T AC=1;AN=198;BQB=0.966168;DP=4424;DP4=1975,2240,18,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.9052e-17;MQSB=0.902151;RPB=0.985352;SGB=41.2518;VDB=0.697667;EFF=INTERGENIC(MODIFIER||||||||||1) FN1152-S.SNP.12:966551 chr12:000966551 0 W/966551-966551 FN1152-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g02730 histidine triad family protein, putative, expressed SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN1614-S.SNP.12:978163 chr12:000978163 0 W/978163-978163 FN1614-S Single Base Substitution G-A INTERGENIC HET SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3551-S.SNP.12:982794 chr12:000982794 0 W/982794-982794 FN3551-S SNP G -> A AC=1;AN=188;BQB=0.987288;DP=2968;DP4=1526,1390,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.22849e-07;MQSB=0.879202;RPB=0.29531;SGB=44.4357;VDB=0.602366;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.12:984346 chr12:000984346 0 W/984346-984346 FN4235-S SNP G -> A AC=1;AN=170;BQB=0.806296;DP=2448;DP4=1275,1089,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.75116e-06;MQSB=0.94999;RPB=0.700906;SGB=43.4296;VDB=0.575864;EFF=INTERGENIC(MODIFIER||||||||||1) FN1188-S.SNP.12:997592 chr12:000997592 0 W/997592-997592 FN1188-S Single Base Substitution A-T INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1188-S.SNP.12:997593 chr12:000997593 0 W/997593-997593 FN1188-S Single Base Substitution A-G INTERGENIC HET SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3371-S.SNP.12:1001133 chr12:001001133 0 W/1001133-1001133 FN3371-S SNP G -> T AC=1;AN=184;BQB=0.923284;DP=2779;DP4=1270,1424,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000719683;MQB=5.02385e-10;MQSB=0.696564;RPB=0.638286;SGB=84.9167;VDB=0.905401;EFF=INTERGENIC(MODIFIER||||||||||1) FN2639-S.SNP.12:1003893 chr12:001003893 0 W/1003893-1003893 FN2639-S SNP T -> A AC=1;AN=200;BQB=0.999632;DP=4543;DP4=2221,1977,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.90362e-08;MQSB=0.963724;RPB=0.0127939;SGB=49.6594;VDB=0.173134;EFF=START_GAINED(LOW||||306|LOC_Os12g02814|protein_coding|CODING|LOC_Os12g02814.1|1|1),UTR_5_PRIME(MODIFIER||275||306|LOC_Os12g02814|protein_coding|CODING|LOC_Os12g02814.1|1|1) FN3804-S.SNP.12:1008483 chr12:001008483 0 W/1008483-1008483 FN3804-S SNP A -> T AC=2;AN=190;BQB=0.999714;DP=2376;DP4=1211,1067,17,22;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.10101;MQB=0.741214;MQSB=0;RPB=0.775107;SGB=166.6;VDB=0.700679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D224E|424|LOC_Os12g02820|protein_coding|CODING|LOC_Os12g02820.1|3|1) FN3570-S.SNP.12:1008619 chr12:001008619 0 W/1008619-1008619 FN3570-S SNP T -> A AC=1;AN=190;BQB=0.31829;DP=2864;DP4=1289,1491,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0631983;MQB=0.662914;MQSB=1.15286e-35;RPB=0.865955;SGB=35.4339;VDB=0.77555;EFF=INTRON(MODIFIER||||424|LOC_Os12g02820|protein_coding|CODING|LOC_Os12g02820.1|2|1) FN1239-S.SNP.12:1010240 chr12:001010240 0 W/1010240-1010240 FN1239-S Single Base Substitution A-T INTRON HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN2691-S.SNP.12:1013405 chr12:001013405 0 W/1013405-1013405 FN2691-S SNP G -> A AC=2;AN=200;BQB=0.402562;DP=5017;DP4=2288,2407,28,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.54249e-34;MQSB=0.934166;RPB=0.322789;SGB=247.682;VDB=0.375966;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F85|216|LOC_Os12g02830|protein_coding|CODING|LOC_Os12g02830.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F85|216|LOC_Os12g02830|protein_coding|CODING|LOC_Os12g02830.2|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F31|162|LOC_Os12g02830|protein_coding|CODING|LOC_Os12g02830.3|1|1) FN3915-S.SNP.12:1018766 chr12:001018766 0 W/1018766-1018766 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.939902;DP=2740;DP4=1544,1108,6,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36991e-07;MQSB=0.827581;RPB=0.970329;SGB=47.0672;VDB=0.614492;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y163|839|LOC_Os12g02840|protein_coding|CODING|LOC_Os12g02840.1|1|1) FN2673-S.SNP.12:1019773 chr12:001019773 0 W/1019773-1019773 FN2673-S SNP T -> A AC=1;AN=200;BQB=0.777962;DP=4302;DP4=2063,1939,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023245;MQB=9.23427e-10;MQSB=0.802783;RPB=0.0263334;SGB=43.8747;VDB=0.261829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S471T|839|LOC_Os12g02840|protein_coding|CODING|LOC_Os12g02840.1|2|1) FN2392.SNP.12:1021160 chr12:001021160 0 W/1021160-1021160 FN2392 SNP G -> T AC=1;AN=200;BQB=0.165062;DP=4470;DP4=2261,1966,15,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.73328e-09;MQSB=0.0585319;RPB=0.483328;SGB=14.3054;VDB=0.608753;EFF=UTR_3_PRIME(MODIFIER||278||839|LOC_Os12g02840|protein_coding|CODING|LOC_Os12g02840.1|2|1) FN319-S.SNP.12:1023176 chr12:001023176 0 W/1023176-1023176 FN319-S Single Base Substitution C-T INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN2202-S.SNP.12:1023374 chr12:001023374 0 W/1023374-1023374 FN2202-S SNP T -> C AC=1;AN=190;BQB=0.355314;DP=5011;DP4=2180,2473,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.74812e-08;MQSB=0.987752;RPB=0.961424;SGB=36.1006;VDB=0.254138;EFF=INTERGENIC(MODIFIER||||||||||1) FN555-S.SNP.12:1023404 chr12:001023404 0 W/1023404-1023404 FN555-S Single Base Substitution T-A INTERGENIC HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN2723-S.SNP.12:1023814 chr12:001023814 0 W/1023814-1023814 FN2723-S SNP A -> T AC=2;AN=200;BQB=0.638918;DP=5385;DP4=2652,2460,14,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.87788e-16;MQSB=0.890909;RPB=0.248594;SGB=87.1368;VDB=0.184228;EFF=INTERGENIC(MODIFIER||||||||||1) FN772-S.SNP.12:1024584 chr12:001024584 0 W/1024584-1024584 FN772-S Single Base Substitution C-T INTERGENIC HOMO SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN1318-S.SNP.12:1025977 chr12:001025977 0 W/1025977-1025977 FN1318-S Single Base Substitution G-A INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN3676-S.SNP.12:1026386 chr12:001026386 0 W/1026386-1026386 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.600872;DP=2900;DP4=1412,1398,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89126e-07;MQSB=0.989675;RPB=0.998654;SGB=23.6597;VDB=0.697873;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.12:1026675 chr12:001026675 0 W/1026675-1026675 FN801-S Single Base Substitution A-G INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN3818-S.SNP.12:1029490 chr12:001029490 0 W/1029490-1029490 FN3818-S SNP G -> A AC=1;AN=190;BQB=0.80977;DP=2207;DP4=1138,976,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.1919e-08;MQSB=0.810045;RPB=0.927266;SGB=28.7675;VDB=0.24916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.12:1034923 chr12:001034923 0 W/1034923-1034923 FN2397 SNP G -> A AC=2;AN=200;BQB=0.889347;DP=4425;DP4=2226,1907,26,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.54104e-24;MQSB=0.730561;RPB=0.930398;SGB=59.2502;VDB=0.830861;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.12:1037642 chr12:001037642 0 W/1037642-1037642 FN4030-S SNP A -> T AC=1;AN=168;BQB=0.992961;DP=2950;DP4=1313,1516,10,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.37409e-12;MQSB=0.881603;RPB=0.107489;SGB=69.0561;VDB=0.0343267;EFF=INTERGENIC(MODIFIER||||||||||1) FN1035-S.SNP.12:1038671 chr12:001038671 0 W/1038671-1038671 FN1035-S Single Base Substitution G-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN935-S.SNP.12:1040067 chr12:001040067 0 W/1040067-1040067 FN935-S Single Base Substitution C-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2696-S.SNP.12:1057562 chr12:001057562 0 W/1057562-1057562 FN2696-S SNP T -> C AC=2;AN=200;BQB=0.501609;DP=5153;DP4=2246,2522,17,32;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.60903e-28;MQSB=0.911345;RPB=0.973945;SGB=112.85;VDB=0.472833;EFF=INTERGENIC(MODIFIER||||||||||1) FN1363-S.SNP.12:1063972 chr12:001063972 0 W/1063972-1063972 FN1363-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g02900 retrotransposon protein, putative, unclassified, expressed SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN2295.SNP.12:1066593 chr12:001066593 0 W/1066593-1066593 FN2295 SNP T -> C AC=1;AN=192;BQB=0.374266;DP=4917;DP4=2430,2165,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.85905e-10;MQSB=0.995263;RPB=0.998334;SGB=5.79046;VDB=0.04198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S886P|1407|LOC_Os12g02900|protein_coding|CODING|LOC_Os12g02900.1|5|1) W416-6-1.SNP.12:1071274 chr12:001071274 0 W/1071274-1071274 W416-6-1 Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g02910 glycosyl transferase, family 8, putative, expressed SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN2410.SNP.12:1073646 chr12:001073646 0 W/1073646-1073646 FN2410 SNP A -> T AC=2;AN=200;BQB=0.177245;DP=5063;DP4=2364,2381,28,50;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00197511;MQB=1.19405e-10;MQSB=0.853554;RPB=0.827739;SGB=260.813;VDB=0.442863;EFF=INTRON(MODIFIER||||659|LOC_Os12g02910|protein_coding|CODING|LOC_Os12g02910.1|4|1) FN-87.SNP.12:1073673 chr12:001073673 0 W/1073673-1073673 FN-87 Single Base Substitution A-C INTRON HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-53.SNP.12:1076537 chr12:001076537 0 W/1076537-1076537 FN-53 Single Base Substitution A-G INTERGENIC HET SNo: 53, Mutant_ID: FN-53, Generation: M2, Mutations: 50, Genes: 14, Seed availability: Yes. FN476-S.SNP.12:1087258 chr12:001087258 0 W/1087258-1087258 FN476-S Single Base Substitution C-T INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN3666-S.SNP.12:1087794 chr12:001087794 0 W/1087794-1087794 FN3666-S SNP C -> A AC=1;AN=190;BQB=0.963999;DP=2800;DP4=1262,1403,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.53765e-06;MQSB=0.717781;RPB=0.444833;SGB=28.9929;VDB=0.081328;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.12:1091547 chr12:001091547 0 W/1091547-1091547 FN4305-S SNP G -> T AC=2;AN=170;BQB=0.852946;DP=2514;DP4=1300,1123,15,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.45423e-14;MQSB=0.956437;RPB=0.7584;SGB=118.955;VDB=0.783207;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-130-1.SNP.12:1091661 chr12:001091661 0 W/1091661-1091661 FN_N1-130-1 Single Base Substitution C-T Homo SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1625-S.SNP.12:1093998 chr12:001093998 0 W/1093998-1093998 FN1625-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.12:1093998 chr12:001093998 0 W/1093998-1093998 FN1626-S SNP A -> T AC=1;AN=188;BQB=2.60541e-08;DP=3778;DP4=1912,1745,38,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.50521e-07;MQSB=0.904598;RPB=0.166262;SGB=-1051.21;VDB=0.000984761;EFF=UTR_3_PRIME(MODIFIER||130||292|LOC_Os12g02950|protein_coding|CODING|LOC_Os12g02950.1|7|1) FN3871-S.SNP.12:1097345 chr12:001097345 0 W/1097345-1097345 FN3871-S SNP G -> A AC=2;AN=158;BQB=0.939846;DP=2620;DP4=1298,1188,13,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.76154e-20;MQSB=0.891724;RPB=0.960206;SGB=23.9973;VDB=0.595384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3871-S.SNP.12:1097346 chr12:001097346 0 W/1097346-1097346 FN3871-S SNP G -> A AC=2;AN=158;BQB=0.997849;DP=2615;DP4=1286,1219,12,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.57375e-19;MQSB=0.754103;RPB=0.999863;SGB=56.991;VDB=0.749879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.12:1118422 chr12:001118422 0 W/1118422-1118422 FN2540-S SNP G -> C AC=1;AN=198;BQB=0.996679;DP=3904;DP4=1787,1893,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0550717;MQB=0.0483438;MQSB=0.000332052;RPB=0.682773;SGB=36.5539;VDB=0.0372281;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G552R|1054|LOC_Os12g03000|protein_coding|CODING|LOC_Os12g03000.1|2|1) FN3992-S.SNP.12:1123610 chr12:001123610 0 W/1123610-1123610 FN3992-S SNP G -> A AC=1;AN=168;BQB=0.7866;DP=2741;DP4=1245,1374,4,6;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.0802627;MQB=0.126699;MQSB=0;RPB=0.52134;SGB=38.8805;VDB=0.61407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P800L|1619|LOC_Os12g03010|protein_coding|CODING|LOC_Os12g03010.1|3|1) FN-164.SNP.12:1129560 chr12:001129560 0 W/1129560-1129560 FN-164 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g03020 transposon protein, putative, CACTA, En/Spm sub-class SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN541-S.SNP.12:1139859 chr12:001139859 0 W/1139859-1139859 FN541-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g03040 no apical meristem protein, putative, expressed SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN2560-S.SNP.12:1145803 chr12:001145803 0 W/1145803-1145803 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.00109989;DP=4049;DP4=1867,2001,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000243689;MQSB=0.989205;RPB=0.999608;SGB=-16.2163;VDB=0.453757;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.12:1151958 chr12:001151958 0 W/1151958-1151958 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.0771672;DP=4703;DP4=2215,2136,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.72605e-13;MQSB=0.923828;RPB=0.375375;SGB=76.3213;VDB=0.724364;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E311*|312|LOC_Os12g03060|protein_coding|CODING|LOC_Os12g03060.1|9|1),STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E310*|311|LOC_Os12g03060|protein_coding|CODING|LOC_Os12g03060.2|9|1) FN1462-S.SNP.12:1155717 chr12:001155717 0 W/1155717-1155717 FN1462-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN4158-S.SNP.12:1156364 chr12:001156364 0 W/1156364-1156364 FN4158-S SNP G -> A AC=1;AN=170;BQB=0.808704;DP=2434;DP4=1022,1262,11,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000410846;MQB=8.62883e-11;MQSB=0.860689;RPB=0.274727;SGB=78.9707;VDB=0.538706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2374.SNP.12:1167355 chr12:001167355 0 W/1167355-1167355 FN2374 SNP C -> T AC=1;AN=192;BQB=0.94203;DP=4905;DP4=1873,2445,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.21046e-06;MQSB=0.859643;RPB=0.789442;SGB=25.5227;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.12:1170486 chr12:001170486 0 W/1170486-1170486 FN2774-S SNP T -> A AC=2;AN=198;BQB=0.957794;DP=3609;DP4=1288,2003,15,25;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.56635e-19;MQSB=0.930524;RPB=0.368016;SGB=44.442;VDB=0.973268;EFF=INTERGENIC(MODIFIER||||||||||1) FN455-S.SNP.12:1172224 chr12:001172224 0 W/1172224-1172224 FN455-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 454, Mutant_ID: FN455-S, Generation: M2, Mutations: 62, Genes: 120, Seed availability: Yes. FN1046-S.SNP.12:1173294 chr12:001173294 0 W/1173294-1173294 FN1046-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN4110-S.SNP.12:1175337 chr12:001175337 0 W/1175337-1175337 FN4110-S SNP C -> T AC=1;AN=182;BQB=0.640287;DP=3546;DP4=1577,1810,15,11;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00253807;MQB=3.15803e-06;MQSB=0.462087;RPB=0.992722;SGB=111.774;VDB=0.190777;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G119E|475|LOC_Os12g03100|protein_coding|CODING|LOC_Os12g03100.1|1|1) FN479-S.SNP.12:1192928 chr12:001192928 0 W/1192928-1192928 FN479-S Single Base Substitution C-G INTRON HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2661-S.SNP.12:1201890 chr12:001201890 0 W/1201890-1201890 FN2661-S SNP A -> C AC=2;AN=200;BQB=0.790685;DP=4460;DP4=2086,2057,17,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.68467e-22;MQSB=0.925951;RPB=0.463266;SGB=-44.0018;VDB=0.547072;EFF=UTR_5_PRIME(MODIFIER||33||311|LOC_Os12g03150|protein_coding|CODING|LOC_Os12g03150.1|1|1) FN970-S.SNP.12:1206877 chr12:001206877 0 W/1206877-1206877 FN970-S Single Base Substitution T-A INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN3842-S.SNP.12:1216371 chr12:001216371 0 W/1216371-1216371 FN3842-S SNP C -> A AC=2;AN=190;BQB=0.990996;DP=2351;DP4=1069,1193,9,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.43183e-09;MQSB=0.859382;RPB=0.747512;SGB=80.9724;VDB=0.835803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.12:1219828 chr12:001219828 0 W/1219828-1219828 FN3358-S SNP T -> A AC=1;AN=184;BQB=0.994917;DP=2936;DP4=1465,1371,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.9593e-09;MQSB=0.955654;RPB=0.760654;SGB=62.3078;VDB=0.310509;EFF=INTRON(MODIFIER||||384|LOC_Os12g03190|protein_coding|CODING|LOC_Os12g03190.1|3|1) FN2364.SNP.12:1231167 chr12:001231167 0 W/1231167-1231167 FN2364 SNP T -> A AC=1;AN=192;BQB=0.453813;DP=6199;DP4=3375,2444,14,25;HOB=5.42535e-05;ICB=0.000109072;MQ=21;MQ0F=0.0961445;MQB=0.99025;MQSB=0;RPB=0.998719;SGB=172.448;VDB=0.0434503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaA/aaT|K202N|214|LOC_Os12g03220|protein_coding|CODING|LOC_Os12g03220.1|2|1) FN1031-S.SNP.12:1236506 chr12:001236506 0 W/1236506-1236506 FN1031-S Single Base Substitution T-C SPLICE_SITE_REGION HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2634-S.SNP.12:1239570 chr12:001239570 0 W/1239570-1239570 FN2634-S SNP A -> G AC=1;AN=200;BQB=0.935904;DP=4812;DP4=2250,2338,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.07179e-13;MQSB=0.55061;RPB=0.991904;SGB=45.1159;VDB=0.420243;EFF=INTERGENIC(MODIFIER||||||||||1) FN2618-S.SNP.12:1242581 chr12:001242581 0 W/1242581-1242581 FN2618-S SNP T -> A AC=1;AN=198;BQB=0.995875;DP=4487;DP4=2243,2062,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000445732;MQB=1.19518e-06;MQSB=0.637474;RPB=0.918801;SGB=21.559;VDB=0.723817;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atT|I502|572|LOC_Os12g03250|protein_coding|CODING|LOC_Os12g03250.1|7|1) FN3597-S.SNP.12:1246732 chr12:001246732 0 W/1246732-1246732 FN3597-S SNP G -> A AC=1;AN=188;BQB=0.975852;DP=3316;DP4=1528,1737,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.824e-07;MQSB=0.928758;RPB=0.820535;SGB=35.9843;VDB=0.37995;EFF=INTERGENIC(MODIFIER||||||||||1) FN4082-S.SNP.12:1250322 chr12:001250322 0 W/1250322-1250322 FN4082-S SNP G -> T AC=2;AN=182;BQB=0.964097;DP=2456;DP4=1359,1006,13,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.65907e-17;MQSB=0.314759;RPB=0.907025;SGB=125.307;VDB=0.271221;EFF=INTERGENIC(MODIFIER||||||||||1) FN795-S.SNP.12:1259742 chr12:001259742 0 W/1259742-1259742 FN795-S Single Base Substitution G-A INTERGENIC HET SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN2104-S.SNP.12:1260490 chr12:001260490 0 W/1260490-1260490 FN2104-S SNP C -> A AC=1;AN=168;BQB=0.271368;DP=3848;DP4=1942,1853,11,18;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.002079;MQB=0.0471389;MQSB=0.842459;RPB=0.994754;SGB=-77.4832;VDB=0.305647;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.12:1273502 chr12:001273502 0 W/1273502-1273502 FN447-S Single Base Substitution C-A INTRON HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN744-S.SNP.12:1275120 chr12:001275120 0 W/1275120-1275120 FN744-S Single Base Substitution T-A INTERGENIC HET SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN-330.SNP.12:1283347 chr12:001283347 0 W/1283347-1283347 FN-330 Single Base Substitution G-A INTERGENIC HET SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1764-S.SNP.12:1283589 chr12:001283589 0 W/1283589-1283589 FN1764-S SNP A -> G AC=1;AN=188;BQB=0.412636;DP=4099;DP4=2278,1771,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.64819e-09;MQSB=0.963153;RPB=0.347886;SGB=-128.262;VDB=0.39665;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.12:1283801 chr12:001283801 0 W/1283801-1283801 FN3529-S SNP T -> C AC=1;AN=188;BQB=0.999954;DP=2898;DP4=1092,1705,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.23945e-07;MQSB=0.00382532;RPB=0.198826;SGB=15.903;VDB=0.0993177;EFF=INTERGENIC(MODIFIER||||||||||1) FN4135-S.SNP.12:1289314 chr12:001289314 0 W/1289314-1289314 FN4135-S SNP A -> G AC=2;AN=182;BQB=0.995438;DP=2836;DP4=1475,1275,15,11;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.83971e-15;MQSB=0.998179;RPB=0.92756;SGB=111.774;VDB=0.403065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3295-S.SNP.12:1296676 chr12:001296676 0 W/1296676-1296676 FN3295-S SNP T -> A AC=1;AN=184;BQB=0.942919;DP=2816;DP4=1372,1351,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77879e-06;MQSB=0.941289;RPB=0.927134;SGB=21.6609;VDB=0.695961;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gTa|E209V|585|LOC_Os12g03340|protein_coding|CODING|LOC_Os12g03340.1|5|1) FN3677-S.SNP.12:1306708 chr12:001306708 0 W/1306708-1306708 FN3677-S SNP A -> G AC=1;AN=190;BQB=0.977738;DP=2579;DP4=1237,1266,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.01575e-08;MQSB=0.910996;RPB=0.478833;SGB=32.5467;VDB=0.309523;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R280|336|LOC_Os12g03360|protein_coding|CODING|LOC_Os12g03360.1|6|1) FN1239-S.SNP.12:1308875 chr12:001308875 0 W/1308875-1308875 FN1239-S Single Base Substitution G-A INTERGENIC HET SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3365-S.SNP.12:1310217 chr12:001310217 0 W/1310217-1310217 FN3365-S SNP G -> C AC=1;AN=184;BQB=0.974515;DP=3974;DP4=1696,2131,10,20;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000251636;MQB=6.13264e-17;MQSB=0.99818;RPB=0.0266163;SGB=130.135;VDB=0.0138007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A142G|275|LOC_Os12g03370|protein_coding|CODING|LOC_Os12g03370.1|1|1) FN-99.SNP.12:1317022 chr12:001317022 0 W/1317022-1317022 FN-99 Single Base Substitution A-T INTRON HOMO SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN3860-S.SNP.12:1317994 chr12:001317994 0 W/1317994-1317994 FN3860-S SNP C -> T AC=2;AN=158;BQB=0.97173;DP=2290;DP4=1167,989,14,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.59723e-14;MQSB=0.289025;RPB=0.323498;SGB=84.6152;VDB=0.206714;EFF=INTRON(MODIFIER||||364|LOC_Os12g03400|protein_coding|CODING|LOC_Os12g03400.1|1|1) FN1152-S.SNP.12:1320233 chr12:001320233 0 W/1320233-1320233 FN1152-S Single Base Substitution C-T INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN521-S.SNP.12:1323663 chr12:001323663 0 W/1323663-1323663 FN521-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN3464-S.SNP.12:1324025 chr12:001324025 0 W/1324025-1324025 FN3464-S SNP A -> G AC=1;AN=184;BQB=0.964024;DP=2517;DP4=1157,1269,3,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4508e-08;MQSB=0.795342;RPB=0.736741;SGB=35.7479;VDB=0.865758;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tCg|L644S|739|LOC_Os12g03410|protein_coding|CODING|LOC_Os12g03410.1|4|1) FN962-S.SNP.12:1333368 chr12:001333368 0 W/1333368-1333368 FN962-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g03420 VQ domain containing protein, putative, expressed SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1227-S.SNP.12:1350689 chr12:001350689 0 W/1350689-1350689 FN1227-S Single Base Substitution G-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1227-S.SNP.12:1350694 chr12:001350694 0 W/1350694-1350694 FN1227-S Single Base Substitution A-C INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN-65.SNP.12:1356638 chr12:001356638 0 W/1356638-1356638 FN-65 Single Base Substitution T-C INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN1356-S.SNP.12:1357263 chr12:001357263 0 W/1357263-1357263 FN1356-S Single Base Substitution G-A INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN861-S.SNP.12:1358973 chr12:001358973 0 W/1358973-1358973 FN861-S Single Base Substitution G-A INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN1120-S.SNP.12:1359054 chr12:001359054 0 W/1359054-1359054 FN1120-S Single Base Substitution C-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2292.SNP.12:1359054 chr12:001359054 0 W/1359054-1359054 FN2292 SNP C -> T AC=2;AN=192;BQB=0.822329;DP=4897;DP4=2187,2389,20,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.16971e-24;MQSB=0.970501;RPB=0.109806;SGB=160.968;VDB=0.622386;EFF=INTERGENIC(MODIFIER||||||||||1) FN3058-S.SNP.12:1359054 chr12:001359054 0 W/1359054-1359054 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.942657;DP=2571;DP4=1127,1344,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54482e-09;MQSB=0.974857;RPB=0.215895;SGB=62.3078;VDB=0.313043;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.12:1359054 chr12:001359054 0 W/1359054-1359054 FN4150-S SNP C -> T AC=1;AN=168;BQB=0.999892;DP=2348;DP4=968,1303,8,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.79417e-10;MQSB=0.887921;RPB=0.943161;SGB=74.528;VDB=0.193692;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.12:1360469 chr12:001360469 0 W/1360469-1360469 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.849012;DP=5169;DP4=2413,2469,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.54679e-09;MQSB=0.942965;RPB=0.720671;SGB=15.9106;VDB=0.27575;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L56|685|LOC_Os12g03470|protein_coding|CODING|LOC_Os12g03470.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L31|660|LOC_Os12g03470|protein_coding|CODING|LOC_Os12g03470.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L31|660|LOC_Os12g03470|protein_coding|CODING|LOC_Os12g03470.3|2|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L31|660|LOC_Os12g03470|protein_coding|CODING|LOC_Os12g03470.4|3|1),SYNONYMOUS_CODING(LOW|SILENT|ttA/ttG|L31|502|LOC_Os12g03470|protein_coding|CODING|LOC_Os12g03470.5|2|1) FN1062-S.SNP.12:1368173 chr12:001368173 0 W/1368173-1368173 FN1062-S Single Base Substitution G-A INTERGENIC HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN409-S.SNP.12:1371226 chr12:001371226 0 W/1371226-1371226 FN409-S Single Base Substitution C-T INTRON HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN476-S.SNP.12:1372069 chr12:001372069 0 W/1372069-1372069 FN476-S Single Base Substitution A-G INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1210-S.SNP.12:1373905 chr12:001373905 0 W/1373905-1373905 FN1210-S Single Base Substitution A-G INTRON HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN451-S.SNP.12:1375704 chr12:001375704 0 W/1375704-1375704 FN451-S Single Base Substitution A-C INTERGENIC HOMO SNo: 450, Mutant_ID: FN451-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN3830-S.SNP.12:1375929 chr12:001375929 0 W/1375929-1375929 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.920538;DP=2397;DP4=868,1451,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.79414e-05;MQSB=0.925141;RPB=0.766508;SGB=30.8803;VDB=0.55693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.12:1377550 chr12:001377550 0 W/1377550-1377550 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN-208.SNP.12:1379647 chr12:001379647 0 W/1379647-1379647 FN-208 Single Base Substitution G-C INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3551-S.SNP.12:1389815 chr12:001389815 0 W/1389815-1389815 FN3551-S SNP G -> A AC=1;AN=188;BQB=0.868042;DP=2722;DP4=1377,1292,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.88184e-08;MQSB=0.902171;RPB=0.731113;SGB=20.9896;VDB=0.798635;EFF=INTRON(MODIFIER||||225|LOC_Os12g03500|protein_coding|CODING|LOC_Os12g03500.1|1|1),INTRON(MODIFIER||||210|LOC_Os12g03500|protein_coding|CODING|LOC_Os12g03500.2|1|1) FN2153-S.SNP.12:1395276 chr12:001395276 0 W/1395276-1395276 FN2153-S SNP A -> T AC=1;AN=168;BQB=0.139548;DP=3468;DP4=1751,1677,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.681e-06;MQSB=0.970011;RPB=0.916073;SGB=2.75988;VDB=0.857696;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.12:1413272 chr12:001413272 0 W/1413272-1413272 FN2591-S SNP G -> A AC=2;AN=198;BQB=0.0876551;DP=3913;DP4=1885,1821,6,10;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.20146e-06;MQSB=0.998593;RPB=0.6996;SGB=47.3393;VDB=0.582532;EFF=INTRON(MODIFIER||||527|LOC_Os12g03554|protein_coding|CODING|LOC_Os12g03554.1|3|1) FN1639-S.SNP.12:1414429 chr12:001414429 0 W/1414429-1414429 FN1639-S Single Base Substitution A-G INTRON HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN3491-S.SNP.12:1418442 chr12:001418442 0 W/1418442-1418442 FN3491-S SNP G -> A AC=2;AN=188;BQB=0.566081;DP=3306;DP4=1616,1574,9,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.30235e-09;MQSB=0.93286;RPB=0.353256;SGB=98.9552;VDB=0.594398;EFF=INTRON(MODIFIER||||527|LOC_Os12g03554|protein_coding|CODING|LOC_Os12g03554.1|5|1) FN337-S.SNP.12:1420273 chr12:001420273 0 W/1420273-1420273 FN337-S Single Base Substitution T-C INTRON HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN-104.SNP.12:1428827 chr12:001428827 0 W/1428827-1428827 FN-104 Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g03570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN3294-S.SNP.12:1429708 chr12:001429708 0 W/1429708-1429708 FN3294-S SNP A -> G AC=2;AN=184;BQB=0.809123;DP=2700;DP4=1414,1156,23,18;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.82603e-23;MQSB=0.699086;RPB=0.36477;SGB=43.3252;VDB=0.719406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D483G|806|LOC_Os12g03570|protein_coding|CODING|LOC_Os12g03570.1|4|1) FN1633-S.SNP.12:1431062 chr12:001431062 0 W/1431062-1431062 FN1633-S Single Base Substitution G-T INTRON HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN3937-S.SNP.12:1431259 chr12:001431259 0 W/1431259-1431259 FN3937-S SNP A -> G AC=1;AN=158;BQB=0.96732;DP=2332;DP4=1180,1076,9,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.99012e-08;MQSB=0.995435;RPB=0.889745;SGB=40.8124;VDB=0.82666;EFF=INTRON(MODIFIER||||806|LOC_Os12g03570|protein_coding|CODING|LOC_Os12g03570.1|5|1) FN-89.SNP.12:1432691 chr12:001432691 0 W/1432691-1432691 FN-89 Single Base Substitution G-A INTERGENIC HOMO SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN436-S.SNP.12:1439683 chr12:001439683 0 W/1439683-1439683 FN436-S Single Base Substitution G-T INTRON HOMO SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-19.SNP.12:1443008 chr12:001443008 0 W/1443008-1443008 FN-19 Single Base Substitution A-T INTRON Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN1422-S.SNP.12:1445434 chr12:001445434 0 W/1445434-1445434 FN1422-S Single Base Substitution C-T INTERGENIC HET SNo: 1197, Mutant_ID: FN1422-S, Generation: M2, Mutations: 73, Genes: 22, Seed availability: Yes. FN2701-S.SNP.12:1445897 chr12:001445897 0 W/1445897-1445897 FN2701-S SNP T -> C AC=1;AN=200;BQB=0.997509;DP=4718;DP4=2398,2054,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.67697e-10;MQSB=0.94973;RPB=0.673997;SGB=29.4849;VDB=0.634609;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaA/aaG|K63|79|LOC_Os12g03601|protein_coding|CODING|LOC_Os12g03601.1|3|1) FN4063-S.SNP.12:1446898 chr12:001446898 0 W/1446898-1446898 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.768695;DP=2577;DP4=1085,1378,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.09709e-07;MQSB=0.932706;RPB=0.994921;SGB=45.0404;VDB=0.571893;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.12:1449000 chr12:001449000 0 W/1449000-1449000 FN519-S Single Base Substitution G-A INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN3705-S.SNP.12:1449013 chr12:001449013 0 W/1449013-1449013 FN3705-S SNP C -> T AC=1;AN=190;BQB=0.994904;DP=1682;DP4=567,1046,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.91941e-05;MQSB=0.988726;RPB=0.616486;SGB=30.8803;VDB=0.0694872;EFF=INTERGENIC(MODIFIER||||||||||1) FN3705-S.SNP.12:1449014 chr12:001449014 0 W/1449014-1449014 FN3705-S SNP C -> T AC=1;AN=190;BQB=0.777623;DP=1686;DP4=580,1037,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.3353e-05;MQSB=0.983979;RPB=0.568986;SGB=30.8803;VDB=0.07273;EFF=INTERGENIC(MODIFIER||||||||||1) FN1313-S.SNP.12:1466905 chr12:001466905 0 W/1466905-1466905 FN1313-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-69.SNP.12:1476770 chr12:001476770 0 W/1476770-1476770 FN-69 Single Base Substitution T-G INTERGENIC HOMO SNo: 69, Mutant_ID: FN-69, Generation: M2, Mutations: 78, Genes: 119, Seed availability: Yes. FN2668-S.SNP.12:1483334 chr12:001483334 0 W/1483334-1483334 FN2668-S SNP C -> T AC=1;AN=200;BQB=0.462923;DP=4746;DP4=2509,2019,19,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.69281e-20;MQSB=0.9956;RPB=0.91774;SGB=126.794;VDB=0.575423;EFF=INTRON(MODIFIER||||832|LOC_Os12g03680|protein_coding|CODING|LOC_Os12g03680.1|7|1) FN4109-S.SNP.12:1483334 chr12:001483334 0 W/1483334-1483334 FN4109-S SNP C -> T AC=2;AN=182;BQB=0.804427;DP=3144;DP4=1609,1453,10,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.57312e-12;MQSB=0.996489;RPB=0.879076;SGB=45.7418;VDB=0.917583;EFF=INTRON(MODIFIER||||832|LOC_Os12g03680|protein_coding|CODING|LOC_Os12g03680.1|7|1) FN3391-S.SNP.12:1485303 chr12:001485303 0 W/1485303-1485303 FN3391-S SNP A -> G AC=2;AN=184;BQB=0.800317;DP=3460;DP4=1729,1596,28,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.96643e-20;MQSB=0.935368;RPB=0.85653;SGB=134.358;VDB=0.946361;EFF=INTRON(MODIFIER||||832|LOC_Os12g03680|protein_coding|CODING|LOC_Os12g03680.1|3|1) FN_815-4-1.SNP.12:1487391 chr12:001487391 0 W/1487391-1487391 FN_815-4-1 Single Base Substitution A-C Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3531-S.SNP.12:1487417 chr12:001487417 0 W/1487417-1487417 FN3531-S SNP A -> G AC=2;AN=188;BQB=0.991316;DP=3048;DP4=1535,1258,13,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.19686e-10;MQSB=0.966263;RPB=0.974124;SGB=103.498;VDB=0.566267;EFF=INTERGENIC(MODIFIER||||||||||1) FN4088-S.SNP.12:1504655 chr12:001504655 0 W/1504655-1504655 FN4088-S SNP C -> T AC=2;AN=182;BQB=0.849587;DP=2899;DP4=1418,1408,9,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.22964e-15;MQSB=0.171431;RPB=0.988048;SGB=102.753;VDB=0.289663;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A109T|680|LOC_Os12g03720|protein_coding|CODING|LOC_Os12g03720.1|2|1),UTR_5_PRIME(MODIFIER||1121||492|LOC_Os12g03720|protein_coding|CODING|LOC_Os12g03720.2|2|1) FN2233-S.SNP.12:1505801 chr12:001505801 0 W/1505801-1505801 FN2233-S SNP G -> T AC=1;AN=190;BQB=0.717565;DP=4388;DP4=1867,2246,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000227894;MQB=4.2771e-07;MQSB=0.557153;RPB=0.863093;SGB=44.5415;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN768-S.SNP.12:1508166 chr12:001508166 0 W/1508166-1508166 FN768-S Single Base Substitution T-A INTRON HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN3401-S.SNP.12:1514259 chr12:001514259 0 W/1514259-1514259 FN3401-S SNP C -> G AC=1;AN=184;BQB=0.814878;DP=2600;DP4=1184,1338,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88179e-10;MQSB=0.995562;RPB=0.67888;SGB=84.9167;VDB=0.0528463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3815-S.SNP.12:1515065 chr12:001515065 0 W/1515065-1515065 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.936606;DP=2591;DP4=1298,1222,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000177753;MQSB=0.99337;RPB=0.780407;SGB=18.3316;VDB=0.594311;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T227K|302|LOC_Os12g03740|protein_coding|CODING|LOC_Os12g03740.1|3|1) FN968-S.SNP.12:1521926 chr12:001521926 0 W/1521926-1521926 FN968-S Single Base Substitution G-A INTRON HET SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3792-S.SNP.12:1523116 chr12:001523116 0 W/1523116-1523116 FN3792-S SNP A -> G AC=1;AN=190;BQB=0.836251;DP=2897;DP4=1278,1515,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52005e-06;MQSB=0.186139;RPB=0.850887;SGB=21.1058;VDB=0.570811;EFF=INTRON(MODIFIER||||869|LOC_Os12g03750|protein_coding|CODING|LOC_Os12g03750.1|1|1) FN-310.SNP.12:1525714 chr12:001525714 0 W/1525714-1525714 FN-310 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g03750 Leucine Rich Repeat family protein, expressed SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1478-S.SNP.12:1529355 chr12:001529355 0 W/1529355-1529355 FN1478-S Single Base Substitution A-T INTRON HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN1280-S.SNP.12:1532199 chr12:001532199 0 W/1532199-1532199 FN1280-S Single Base Substitution C-T INTRON HOMO SNo: 1094, Mutant_ID: FN1280-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1212-S.SNP.12:1535574 chr12:001535574 0 W/1535574-1535574 FN1212-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2252-S.SNP.12:1539205 chr12:001539205 0 W/1539205-1539205 FN2252-S SNP G -> A AC=1;AN=190;BQB=0.983246;DP=4926;DP4=2406,2187,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000203004;MQB=9.81727e-05;MQSB=0.891396;RPB=0.903338;SGB=21.8853;VDB=0.886285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.12:1541662 chr12:001541662 0 W/1541662-1541662 FN2477 SNP C -> T AC=1;AN=200;BQB=0.71272;DP=4469;DP4=1989,2206,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.18428e-11;MQSB=0.952529;RPB=0.949826;SGB=42.5108;VDB=0.519799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3387-S.SNP.12:1547159 chr12:001547159 0 W/1547159-1547159 FN3387-S SNP T -> C AC=1;AN=184;BQB=0.607851;DP=3140;DP4=1835,1205,10,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.86212e-08;MQSB=0.876268;RPB=0.391329;SGB=-16.2794;VDB=0.692394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.12:1548998 chr12:001548998 0 W/1548998-1548998 FN1217-S Single Base Substitution C-G INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN2638-S.SNP.12:1549358 chr12:001549358 0 W/1549358-1549358 FN2638-S SNP A -> T AC=1;AN=200;BQB=0.433596;DP=5680;DP4=2739,2703,9,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.58789e-08;MQSB=0.771843;RPB=0.526247;SGB=36.6644;VDB=0.273837;EFF=INTERGENIC(MODIFIER||||||||||1) FN3935-S.SNP.12:1549407 chr12:001549407 0 W/1549407-1549407 FN3935-S SNP T -> G AC=1;AN=158;BQB=0.894623;DP=2910;DP4=1612,1181,8,14;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.85182e-12;MQSB=0.831089;RPB=0.600346;SGB=90.7616;VDB=0.788551;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.12:1551349 chr12:001551349 0 W/1551349-1551349 FN917-S Single Base Substitution G-C INTERGENIC HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN-329.SNP.12:1554271 chr12:001554271 0 W/1554271-1554271 FN-329 Single Base Substitution C-T INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN2686-S.SNP.12:1555723 chr12:001555723 0 W/1555723-1555723 FN2686-S SNP G -> T AC=1;AN=200;BQB=0.85433;DP=5214;DP4=2594,2361,5,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00268508;MQB=0.00113807;MQSB=0.568335;RPB=0.98913;SGB=25.849;VDB=0.916943;EFF=INTRON(MODIFIER||||438|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.2|1|1),INTRON(MODIFIER||||237|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.3|1|1),INTRON(MODIFIER||||390|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.1|1|1) FN3286-S.SNP.12:1556247 chr12:001556247 0 W/1556247-1556247 FN3286-S SNP C -> G AC=1;AN=184;BQB=0.868971;DP=2640;DP4=1322,1249,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0215909;MQB=0.562645;MQSB=0.512844;RPB=0.875251;SGB=30.8405;VDB=0.571015;EFF=START_GAINED(LOW||||438|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.2|2|1),START_GAINED(LOW||||237|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.3|2|1),START_GAINED(LOW||||390|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.1|2|1),UTR_5_PRIME(MODIFIER||32||438|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.2|2|1),UTR_5_PRIME(MODIFIER||32||237|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.3|2|1),UTR_5_PRIME(MODIFIER||437||390|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.1|2|1) FN2555-S.SNP.12:1559665 chr12:001559665 0 W/1559665-1559665 FN2555-S SNP C -> T AC=2;AN=198;BQB=0.998874;DP=3833;DP4=1832,1806,20,18;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0.00573963;MQB=2.92519e-18;MQSB=0.40728;RPB=0.100247;SGB=126.432;VDB=0.418508;EFF=SPLICE_SITE_REGION(LOW||||390|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.1|12|1),SPLICE_SITE_REGION(LOW||||438|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.2|13|1),INTRON(MODIFIER||||390|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.1|12|1),INTRON(MODIFIER||||438|LOC_Os12g03810|protein_coding|CODING|LOC_Os12g03810.2|13|1) FN1640-S.SNP.12:1565692 chr12:001565692 0 W/1565692-1565692 FN1640-S Single Base Substitution G-A INTRON HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN1505-S.SNP.12:1580816 chr12:001580816 0 W/1580816-1580816 FN1505-S Single Base Substitution T-C INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1505-S.SNP.12:1580818 chr12:001580818 0 W/1580818-1580818 FN1505-S Single Base Substitution G-C INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN1685-S.SNP.12:1581585 chr12:001581585 0 W/1581585-1581585 FN1685-S SNP G -> A AC=1;AN=188;BQB=0.639671;DP=3270;DP4=1309,1903,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.67108e-08;MQSB=0.821123;RPB=0.65419;SGB=-36.9078;VDB=0.212591;EFF=INTERGENIC(MODIFIER||||||||||1) FN1124-S.SNP.12:1583162 chr12:001583162 0 W/1583162-1583162 FN1124-S Single Base Substitution T-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN3507-S.SNP.12:1590623 chr12:001590623 0 W/1590623-1590623 FN3507-S SNP A -> G AC=2;AN=188;BQB=0.970396;DP=2627;DP4=1214,1278,14,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.71455e-19;MQSB=0.946087;RPB=0.484751;SGB=106.85;VDB=0.588583;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.12:1595746 chr12:001595746 0 W/1595746-1595746 FN957-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g03870 major facilitator superfamily antiporter, putative, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN957-S.SNP.12:1595747 chr12:001595747 0 W/1595747-1595747 FN957-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g03870 major facilitator superfamily antiporter, putative, expressed SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN2161-S.SNP.12:1600648 chr12:001600648 0 W/1600648-1600648 FN2161-S SNP C -> T AC=2;AN=168;BQB=0.0913299;DP=3862;DP4=1511,2287,20,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.76178e-10;MQSB=0.722617;RPB=0.0722593;SGB=-162.179;VDB=0.874201;EFF=INTRON(MODIFIER||||465|LOC_Os12g03870|protein_coding|CODING|LOC_Os12g03870.1|1|1) FN940-S.SNP.12:1603066 chr12:001603066 0 W/1603066-1603066 FN940-S Single Base Substitution G-A INTRON HOMO SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN621-S.SNP.12:1608993 chr12:001608993 0 W/1608993-1608993 FN621-S Single Base Substitution A-T INTRON HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN2781-S.SNP.12:1617182 chr12:001617182 0 W/1617182-1617182 FN2781-S SNP G -> C AC=1;AN=198;BQB=0.734265;DP=4467;DP4=2269,1812,18,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.58133e-13;MQSB=0.376143;RPB=0.172594;SGB=79.6954;VDB=0.202331;EFF=INTRON(MODIFIER||||425|LOC_Os12g03899|protein_coding|CODING|LOC_Os12g03899.4|2|1) FN1375-S.SNP.12:1617649 chr12:001617649 0 W/1617649-1617649 FN1375-S Single Base Substitution T-G INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN2257-S.SNP.12:1630552 chr12:001630552 0 W/1630552-1630552 FN2257-S SNP T -> C AC=2;AN=190;BQB=0.683089;DP=4971;DP4=2226,2270,41,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000402334;MQB=9.20252e-28;MQSB=0.662187;RPB=0.837122;SGB=11.7025;VDB=0.640349;EFF=INTERGENIC(MODIFIER||||||||||1) FN542-S.SNP.12:1638825 chr12:001638825 0 W/1638825-1638825 FN542-S Single Base Substitution A-G INTRON HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN4229-S.SNP.12:1642506 chr12:001642506 0 W/1642506-1642506 FN4229-S SNP C -> T AC=1;AN=170;BQB=0.981048;DP=2419;DP4=1269,1083,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.89119e-05;MQSB=0.928797;RPB=0.711268;SGB=38.987;VDB=0.659505;EFF=INTRON(MODIFIER||||289|LOC_Os12g03950|protein_coding|CODING|LOC_Os12g03950.1|1|1) FN2494.SNP.12:1646439 chr12:001646439 0 W/1646439-1646439 FN2494 SNP G -> T AC=1;AN=200;BQB=0.755941;DP=3956;DP4=1951,1727,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.52907e-06;MQSB=0.907219;RPB=0.961107;SGB=45.0543;VDB=0.141079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E3D|283|LOC_Os12g03960|protein_coding|CODING|LOC_Os12g03960.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E3D|282|LOC_Os12g03960|protein_coding|CODING|LOC_Os12g03960.2|1|1) FN3511-S.SNP.12:1650034 chr12:001650034 0 W/1650034-1650034 FN3511-S SNP G -> T AC=1;AN=188;BQB=0.676014;DP=2676;DP4=1333,1273,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0227952;MQB=0.411308;MQSB=9.50439e-38;RPB=0.0707982;SGB=44.4357;VDB=0.261569;EFF=INTRON(MODIFIER||||541|LOC_Os12g03970|protein_coding|CODING|LOC_Os12g03970.1|4|1) FN2751-S.SNP.12:1653868 chr12:001653868 0 W/1653868-1653868 FN2751-S SNP A -> G AC=1;AN=200;BQB=0.133617;DP=4903;DP4=2321,2370,8,14;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0122374;MQB=0.275738;MQSB=0.000285459;RPB=0.991263;SGB=42.5108;VDB=0.138342;EFF=SPLICE_SITE_DONOR(HIGH||||356|LOC_Os12g03990|protein_coding|CODING|LOC_Os12g03990.1|4|1),INTRON(MODIFIER||||356|LOC_Os12g03990|protein_coding|CODING|LOC_Os12g03990.1|4|1);LOF=(LOC_Os12g03990|LOC_Os12g03990|1|1.00) FN2141-S.SNP.12:1654290 chr12:001654290 0 W/1654290-1654290 FN2141-S SNP A -> T AC=1;AN=168;BQB=0.455117;DP=4018;DP4=1645,2344,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.15206e-08;MQSB=0.829039;RPB=0.986297;SGB=-14.0801;VDB=0.996473;EFF=INTRON(MODIFIER||||356|LOC_Os12g03990|protein_coding|CODING|LOC_Os12g03990.1|1|1) FN3899-S.SNP.12:1663899 chr12:001663899 0 W/1663899-1663899 FN3899-S SNP T -> A AC=2;AN=158;BQB=0.873097;DP=2403;DP4=1277,1018,10,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.44473e-10;MQSB=0.990738;RPB=0.996311;SGB=90.7616;VDB=0.772379;EFF=UTR_3_PRIME(MODIFIER||362||542|LOC_Os12g04010|protein_coding|CODING|LOC_Os12g04010.1|12|1) FN3559-S.SNP.12:1664294 chr12:001664294 0 W/1664294-1664294 FN3559-S SNP A -> G AC=1;AN=188;BQB=0.942332;DP=2825;DP4=1321,1358,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.37352e-11;MQSB=0.294312;RPB=0.748036;SGB=89.8686;VDB=0.601642;EFF=SYNONYMOUS_CODING(LOW|SILENT|caT/caC|H532|542|LOC_Os12g04010|protein_coding|CODING|LOC_Os12g04010.1|12|1) FN-202.SNP.12:1669130 chr12:001669130 0 W/1669130-1669130 FN-202 Single Base Substitution G-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3710-S.SNP.12:1671209 chr12:001671209 0 W/1671209-1671209 FN3710-S SNP G -> C AC=1;AN=190;BQB=0.989265;DP=3302;DP4=1852,1309,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.19754e-06;MQSB=0.812824;RPB=0.635147;SGB=44.5415;VDB=0.293805;EFF=INTERGENIC(MODIFIER||||||||||1) FN3628-S.SNP.12:1691691 chr12:001691691 0 W/1691691-1691691 FN3628-S SNP A -> G AC=1;AN=190;BQB=0.992158;DP=2643;DP4=1535,937,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.2855e-06;MQSB=0.44922;RPB=0.504447;SGB=32.5467;VDB=0.173134;EFF=INTERGENIC(MODIFIER||||||||||1) FN1526-S.SNP.12:1693482 chr12:001693482 0 W/1693482-1693482 FN1526-S Single Base Substitution C-T INTERGENIC Homo SNo: 1277, Mutant_ID: FN1526-S, Generation: M2, Mutations: 68, Genes: 54, Seed availability: No. FN1153-S.SNP.12:1702742 chr12:001702742 0 W/1702742-1702742 FN1153-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g04050 retrotransposon protein, putative, unclassified, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3422-S.SNP.12:1705647 chr12:001705647 0 W/1705647-1705647 FN3422-S SNP G -> A AC=1;AN=184;BQB=0.823334;DP=4034;DP4=2053,1890,8,5;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.00495786;MQB=0.747787;MQSB=5.1469e-18;RPB=0.899724;SGB=53.2642;VDB=0.0676006;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q431*|1809|LOC_Os12g04050|protein_coding|CODING|LOC_Os12g04050.1|1|1);LOF=(LOC_Os12g04050|LOC_Os12g04050|1|1.00);NMD=(LOC_Os12g04050|LOC_Os12g04050|1|1.00) FN1115-S.SNP.12:1708462 chr12:001708462 0 W/1708462-1708462 FN1115-S Single Base Substitution A-T INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1008-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN1008-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g04110 pentatricopeptide, putative, expressed SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN1186-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN1186-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g04110 pentatricopeptide, putative, expressed SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN317-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN317-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g04110 pentatricopeptide, putative, expressed SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN3480-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN3480-S SNP C -> A AC=2;AN=184;BQB=0.950164;DP=2627;DP4=1404,1138,16,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.24123e-16;MQSB=0.999522;RPB=0.856074;SGB=92.0965;VDB=0.182426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L1175F|1595|LOC_Os12g04110|protein_coding|CODING|LOC_Os12g04110.1|8|1) FN3743-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN3743-S SNP C -> A AC=1;AN=190;BQB=0.871855;DP=2701;DP4=1321,1299,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.2445e-09;MQSB=0.888702;RPB=0.513055;SGB=67.3108;VDB=0.921221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L1175F|1595|LOC_Os12g04110|protein_coding|CODING|LOC_Os12g04110.1|8|1) FN4081-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN4081-S SNP C -> A AC=2;AN=182;BQB=0.990867;DP=3078;DP4=1588,1410,15,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.60627e-15;MQSB=0.999995;RPB=0.211024;SGB=116.285;VDB=0.680626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L1175F|1595|LOC_Os12g04110|protein_coding|CODING|LOC_Os12g04110.1|8|1) FN4201-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN4201-S SNP C -> A AC=1;AN=170;BQB=0.943245;DP=2560;DP4=1309,1195,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.34685e-07;MQSB=0.962552;RPB=0.94811;SGB=27.9928;VDB=0.961034;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttG/ttT|L1175F|1595|LOC_Os12g04110|protein_coding|CODING|LOC_Os12g04110.1|8|1) FN941-S.SNP.12:1720970 chr12:001720970 0 W/1720970-1720970 FN941-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g04110 pentatricopeptide, putative, expressed SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2703-S.SNP.12:1723128 chr12:001723128 0 W/1723128-1723128 FN2703-S SNP T -> A AC=1;AN=200;BQB=0.940227;DP=4868;DP4=2414,2245,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24976e-15;MQSB=0.955983;RPB=0.494842;SGB=104.921;VDB=0.339822;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aat/Tat|N707Y|1595|LOC_Os12g04110|protein_coding|CODING|LOC_Os12g04110.1|6|1) FN2284.SNP.12:1729948 chr12:001729948 0 W/1729948-1729948 FN2284 SNP T -> G AC=1;AN=192;BQB=0.956038;DP=5360;DP4=2683,2416,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000186567;MQB=1.57103e-12;MQSB=0.0797634;RPB=0.896251;SGB=78.9878;VDB=0.327558;EFF=INTRON(MODIFIER||||250|LOC_Os12g04120|protein_coding|CODING|LOC_Os12g04120.1|1|1) FN2558-S.SNP.12:1739458 chr12:001739458 0 W/1739458-1739458 FN2558-S SNP T -> A AC=1;AN=198;BQB=0.632949;DP=3883;DP4=1660,1872,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.84993e-09;MQSB=0.999106;RPB=0.87588;SGB=-12.0504;VDB=0.266887;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.12:1739459 chr12:001739459 0 W/1739459-1739459 FN1221-S Single Base Substitution A-T INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2491.SNP.12:1739459 chr12:001739459 0 W/1739459-1739459 FN2491 SNP A -> T AC=1;AN=200;BQB=0.418586;DP=4196;DP4=1713,2119,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000238322;MQB=7.67947e-09;MQSB=0.871088;RPB=0.548028;SGB=-56.9157;VDB=0.341532;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.12:1742213 chr12:001742213 0 W/1742213-1742213 FN3383-S SNP C -> T AC=1;AN=184;BQB=0.894852;DP=2782;DP4=1076,1616,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.83736e-08;MQSB=0.995218;RPB=0.915772;SGB=32.2261;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.12:1746553 chr12:001746553 0 W/1746553-1746553 FN_831-4-1 Single Base Substitution G-T HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN-168.SNP.12:1749098 chr12:001749098 0 W/1749098-1749098 FN-168 Single Base Substitution T-C INTRON HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN1746-S.SNP.12:1751157 chr12:001751157 0 W/1751157-1751157 FN1746-S SNP T -> G AC=2;AN=188;BQB=0.76705;DP=2710;DP4=1787,862,35,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.22122e-15;MQSB=0.886082;RPB=0.383857;SGB=-103.25;VDB=0.0328115;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.12:1754825 chr12:001754825 0 W/1754825-1754825 FN2386 SNP G -> A AC=1;AN=192;BQB=0.642475;DP=5150;DP4=2427,2188,22,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000194175;MQB=2.96861e-19;MQSB=0.391105;RPB=0.849227;SGB=-45.7834;VDB=0.140836;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.12:1762374 chr12:001762374 0 W/1762374-1762374 FN917-S Single Base Substitution G-A INTERGENIC HOMO SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN1421-S.SNP.12:1763717 chr12:001763717 0 W/1763717-1763717 FN1421-S Single Base Substitution C-A INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1065-S.SNP.12:1773162 chr12:001773162 0 W/1773162-1773162 FN1065-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN2619-S.SNP.12:1774371 chr12:001774371 0 W/1774371-1774371 FN2619-S SNP C -> T AC=1;AN=198;BQB=0.715586;DP=4228;DP4=2109,1894,17,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.2596e-16;MQSB=0.979742;RPB=0.383433;SGB=86.8856;VDB=0.45594;EFF=UTR_5_PRIME(MODIFIER||974||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.1|1|1),UTR_5_PRIME(MODIFIER||974||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.5|1|1),UTR_5_PRIME(MODIFIER||974||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.2|1|1),UTR_5_PRIME(MODIFIER||974||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.4|1|1),INTRON(MODIFIER||||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.3|1|1) FN2648-S.SNP.12:1774708 chr12:001774708 0 W/1774708-1774708 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.932352;DP=4496;DP4=1852,2227,8,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.58186e-09;MQSB=0.961695;RPB=0.739899;SGB=42.5108;VDB=0.069744;EFF=UTR_5_PRIME(MODIFIER||1311||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.1|1|1),UTR_5_PRIME(MODIFIER||1311||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.5|1|1),UTR_5_PRIME(MODIFIER||1311||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.2|1|1),UTR_5_PRIME(MODIFIER||1311||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.4|1|1),UTR_5_PRIME(MODIFIER||1311||60|LOC_Os12g04204|protein_coding|CODING|LOC_Os12g04204.3|1|1) FN2619-S.SNP.12:1775576 chr12:001775576 0 W/1775576-1775576 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.561977;DP=4222;DP4=1887,2099,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.07799e-16;MQSB=0.695674;RPB=0.861789;SGB=57.8907;VDB=0.390996;EFF=INTRON(MODIFIER||||206|LOC_Os12g04210|protein_coding|CODING|LOC_Os12g04210.1|2|1) FN2619-S.SNP.12:1775577 chr12:001775577 0 W/1775577-1775577 FN2619-S SNP A -> T AC=1;AN=198;BQB=0.53326;DP=4214;DP4=1841,2108,12,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.74818e-16;MQSB=0.520037;RPB=0.779668;SGB=86.8856;VDB=0.155982;EFF=INTRON(MODIFIER||||206|LOC_Os12g04210|protein_coding|CODING|LOC_Os12g04210.1|2|1) FN580-S.SNP.12:1782779 chr12:001782779 0 W/1782779-1782779 FN580-S Single Base Substitution A-G INTERGENIC HET SNo: 568, Mutant_ID: FN580-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN337-S.SNP.12:1789720 chr12:001789720 0 W/1789720-1789720 FN337-S Single Base Substitution C-G INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN337-S.SNP.12:1789721 chr12:001789721 0 W/1789721-1789721 FN337-S Single Base Substitution A-G INTERGENIC HOMO SNo: 329, Mutant_ID: FN337-S, Generation: M2, Mutations: 63, Genes: 26, Seed availability: Yes. FN242-S.SNP.12:1795074 chr12:001795074 0 W/1795074-1795074 FN242-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN3535-S.SNP.12:1798446 chr12:001798446 0 W/1798446-1798446 FN3535-S SNP G -> A AC=2;AN=188;BQB=0.969249;DP=3481;DP4=1566,1822,17,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.2877e-16;MQSB=0.807837;RPB=0.388133;SGB=121.672;VDB=0.102223;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.12:1799802 chr12:001799802 0 W/1799802-1799802 FN2784-S SNP G -> T AC=1;AN=198;BQB=0.951218;DP=4504;DP4=2190,2080,19,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.26991e-16;MQSB=0.986628;RPB=0.505921;SGB=132.261;VDB=0.553624;EFF=INTRON(MODIFIER||||339|LOC_Os12g04250|protein_coding|CODING|LOC_Os12g04250.1|2|1) FN2266-S.SNP.12:1799968 chr12:001799968 0 W/1799968-1799968 FN2266-S SNP G -> A AC=1;AN=190;BQB=0.534792;DP=5269;DP4=1982,2941,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.9475e-13;MQSB=0.889604;RPB=0.067907;SGB=25.8654;VDB=0.174423;EFF=INTRON(MODIFIER||||339|LOC_Os12g04250|protein_coding|CODING|LOC_Os12g04250.1|2|1) FN1737-S.SNP.12:1803336 chr12:001803336 0 W/1803336-1803336 FN1737-S SNP T -> A AC=1;AN=188;BQB=0.0814755;DP=2792;DP4=1213,1219,12,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.38911e-05;MQSB=0.0249636;RPB=0.0384021;SGB=-117.892;VDB=0.38118;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S87T|427|LOC_Os12g04260|protein_coding|CODING|LOC_Os12g04260.1|2|1) FN1737-S.SNP.12:1803337 chr12:001803337 0 W/1803337-1803337 FN1737-S SNP C -> T AC=1;AN=188;BQB=3.06603e-07;DP=2777;DP4=1199,1216,28,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00472712;MQSB=0.0260785;RPB=8.2323e-06;SGB=-768.731;VDB=0.00359007;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S87L|427|LOC_Os12g04260|protein_coding|CODING|LOC_Os12g04260.1|2|1) FN729-S.SNP.12:1804358 chr12:001804358 0 W/1804358-1804358 FN729-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g04260 astaxanthin synthase KC28, putative, expressed SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN-65.SNP.12:1805719 chr12:001805719 0 W/1805719-1805719 FN-65 Single Base Substitution A-G INTRON HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN551-S.SNP.12:1809757 chr12:001809757 0 W/1809757-1809757 FN551-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g04270 cytochrome c-type biogenesis protein dbsD-like, putative, expressed SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2663-S.SNP.12:1813115 chr12:001813115 0 W/1813115-1813115 FN2663-S SNP C -> T AC=1;AN=200;BQB=0.973363;DP=4771;DP4=2419,2106,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.18971e-11;MQSB=0.974682;RPB=0.809839;SGB=-13.7154;VDB=0.365392;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.12:1820014 chr12:001820014 0 W/1820014-1820014 FN1108-S Single Base Substitution C-T INTRON HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN3438-S.SNP.12:1821210 chr12:001821210 0 W/1821210-1821210 FN3438-S SNP T -> A AC=2;AN=184;BQB=0.971137;DP=2622;DP4=1261,1257,19,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000381388;MQB=1.09003e-15;MQSB=0.844469;RPB=0.503999;SGB=125.613;VDB=0.773414;EFF=INTRON(MODIFIER||||418|LOC_Os12g04290|protein_coding|CODING|LOC_Os12g04290.1|8|1) FN3451-S.SNP.12:1826825 chr12:001826825 0 W/1826825-1826825 FN3451-S SNP T -> A AC=1;AN=184;BQB=0.999958;DP=2816;DP4=1289,1434,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=16;MQ0F=0.197798;MQB=0.156566;MQSB=3.89387e-16;RPB=0.653876;SGB=62.3078;VDB=0.133364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V730D|1151|LOC_Os12g04310|protein_coding|CODING|LOC_Os12g04310.1|1|1) FN1276-S.SNP.12:1834684 chr12:001834684 0 W/1834684-1834684 FN1276-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN1745-S.SNP.12:1834684 chr12:001834684 0 W/1834684-1834684 FN1745-S SNP C -> T AC=2;AN=188;BQB=0.0114571;DP=2149;DP4=1162,927,11,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.41552e-07;MQSB=0.930921;RPB=0.394482;SGB=-179.986;VDB=0.0407287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2457.SNP.12:1834684 chr12:001834684 0 W/1834684-1834684 FN2457 SNP C -> T AC=2;AN=200;BQB=0.852772;DP=4488;DP4=2072,1822,19,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.83988e-17;MQSB=0.375011;RPB=0.520265;SGB=-4.63785;VDB=0.180535;EFF=INTERGENIC(MODIFIER||||||||||1) FN733-S.SNP.12:1834684 chr12:001834684 0 W/1834684-1834684 FN733-S Single Base Substitution C-T INTERGENIC HOMO SNo: 658, Mutant_ID: FN733-S, Generation: M2, Mutations: 67, Genes: 37, Seed availability: Yes. FN1124-S.SNP.12:1835714 chr12:001835714 0 W/1835714-1835714 FN1124-S Single Base Substitution C-T INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN282-S.SNP.12:1841927 chr12:001841927 0 W/1841927-1841927 FN282-S Single Base Substitution A-T INTERGENIC HET SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN2446.SNP.12:1845284 chr12:001845284 0 W/1845284-1845284 FN2446 SNP G -> T AC=1;AN=200;BQB=0.87434;DP=4170;DP4=1997,1865,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000239808;MQB=2.16644e-07;MQSB=0.806581;RPB=0.591301;SGB=21.6694;VDB=0.648539;EFF=INTERGENIC(MODIFIER||||||||||1) W598-2-1.SNP.12:1846373 chr12:001846373 0 W/1846373-1846373 W598-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2445.SNP.12:1868906 chr12:001868906 0 W/1868906-1868906 FN2445 SNP G -> A AC=1;AN=200;BQB=0.562824;DP=5282;DP4=2041,2840,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.74619e-13;MQSB=0.660262;RPB=0.393763;SGB=17.5158;VDB=0.044078;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.12:1873616 chr12:001873616 0 W/1873616-1873616 FN2242-S SNP C -> T AC=1;AN=188;BQB=0.423048;DP=4975;DP4=2115,2401,7,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000201005;MQB=1.72108e-11;MQSB=0.353096;RPB=0.624112;SGB=41.5369;VDB=0.769405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.12:1878115 chr12:001878115 0 W/1878115-1878115 FN1419-S Single Base Substitution T-C INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2696-S.SNP.12:1880528 chr12:001880528 0 W/1880528-1880528 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.999723;DP=4914;DP4=2429,2225,22,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.72214e-21;MQSB=0.979048;RPB=0.663834;SGB=160.183;VDB=0.963316;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.12:1892878 chr12:001892878 0 W/1892878-1892878 FN3831-S SNP A -> C AC=1;AN=190;BQB=0.946487;DP=2690;DP4=1195,1423,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.88134e-11;MQSB=0.697144;RPB=0.926877;SGB=50.3161;VDB=0.260755;EFF=INTRON(MODIFIER||||635|LOC_Os12g04440|protein_coding|CODING|LOC_Os12g04440.1|6|1),INTRON(MODIFIER||||589|LOC_Os12g04440|protein_coding|CODING|LOC_Os12g04440.2|6|1) FN996-S.SNP.12:1894282 chr12:001894282 0 W/1894282-1894282 FN996-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g04440 2-isopropylmalate synthase B, putative, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN-98.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN-98 Single Base Substitution C-T INTRON HOMO SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN1203-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN1203-S Single Base Substitution C-T INTRON HOMO SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1316-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN1316-S Single Base Substitution C-T INTRON HOMO SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN1402-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN1402-S Single Base Substitution C-T INTRON HOMO SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN1531-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN1531-S Single Base Substitution C-T INTRON Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2116-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN2116-S SNP C -> T AC=2;AN=168;BQB=0.448042;DP=3267;DP4=1673,1528,26,29;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=2.77667e-17;MQSB=0.592676;RPB=0.0510417;SGB=-237.132;VDB=0.651018;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN2638-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN2638-S SNP C -> T AC=2;AN=200;BQB=0.886493;DP=4699;DP4=2277,2019,17,23;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=2.67507e-23;MQSB=0.00452972;RPB=0.385344;SGB=-44.3966;VDB=0.95667;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN3729-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN3729-S SNP C -> T AC=2;AN=190;BQB=0.854635;DP=2602;DP4=1351,1085,23,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=1.53651e-18;MQSB=0.772523;RPB=0.978245;SGB=114.286;VDB=0.832103;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN4017-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN4017-S SNP C -> T AC=2;AN=168;BQB=0.520877;DP=2419;DP4=1186,1054,20,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.49719e-13;MQSB=0.380781;RPB=0.996658;SGB=99.9335;VDB=0.945637;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN4130-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN4130-S SNP C -> T AC=2;AN=182;BQB=0.809932;DP=2251;DP4=1095,1042,11,6;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=1.54829e-09;MQSB=1;RPB=0.897807;SGB=49.6712;VDB=0.709092;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN4275-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN4275-S SNP C -> T AC=2;AN=170;BQB=0.999269;DP=1878;DP4=920,869,4,4;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=8.50594e-05;MQSB=0.510294;RPB=0.260909;SGB=30.1021;VDB=0.0269844;EFF=INTRON(MODIFIER||||243|LOC_Os12g04450|protein_coding|CODING|LOC_Os12g04450.1|2|1) FN473-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN473-S Single Base Substitution C-T INTRON HOMO SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN631-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN631-S Single Base Substitution C-T INTRON HOMO SNo: 596, Mutant_ID: FN631-S, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN702-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN702-S Single Base Substitution C-T INTRON HOMO SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN794-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN794-S Single Base Substitution C-T INTRON HOMO SNo: 714, Mutant_ID: FN794-S, Generation: M2, Mutations: 48, Genes: 25, Seed availability: Yes. FN809-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN809-S Single Base Substitution C-T INTRON HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN978-S.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 FN978-S Single Base Substitution C-T INTRON HOMO SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. W472-5-1.SNP.12:1898014 chr12:001898014 0 W/1898014-1898014 W472-5-1 Single Base Substitution C-T INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2730-S.SNP.12:1904601 chr12:001904601 0 W/1904601-1904601 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.999611;DP=4984;DP4=2360,2335,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45891e-05;MQSB=0.864337;RPB=0.938251;SGB=31.2392;VDB=0.27538;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.12:1909145 chr12:001909145 0 W/1909145-1909145 FN3504-S SNP G -> A AC=1;AN=188;BQB=0.990749;DP=3456;DP4=1067,2284,4,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.73654e-09;MQSB=0.334799;RPB=0.631947;SGB=3.99491;VDB=0.645276;EFF=UTR_5_PRIME(MODIFIER||77||501|LOC_Os12g04480|protein_coding|CODING|LOC_Os12g04480.1|1|1) FN-277.SNP.12:1926022 chr12:001926022 0 W/1926022-1926022 FN-277 Single Base Substitution C-T SPLICE_SITE_DONOR HET LOC_Os12g04520 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1586-S.SNP.12:1926211 chr12:001926211 0 W/1926211-1926211 FN1586-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os12g04520 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2140-S.SNP.12:1926211 chr12:001926211 0 W/1926211-1926211 FN2140-S SNP G -> A AC=2;AN=168;BQB=0.639418;DP=2194;DP4=790,1314,8,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.98765e-13;MQSB=0.404629;RPB=0.470716;SGB=114.204;VDB=0.233581;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L140F|583|LOC_Os12g04520|protein_coding|CODING|LOC_Os12g04520.1|1|1) FN2192-S.SNP.12:1926211 chr12:001926211 0 W/1926211-1926211 FN2192-S SNP G -> A AC=2;AN=190;BQB=0.0963299;DP=4040;DP4=1703,1983,23,32;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=2.2712e-26;MQSB=0.838459;RPB=0.261566;SGB=244.912;VDB=0.226497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L140F|583|LOC_Os12g04520|protein_coding|CODING|LOC_Os12g04520.1|1|1) FN3718-S.SNP.12:1926211 chr12:001926211 0 W/1926211-1926211 FN3718-S SNP G -> A AC=2;AN=190;BQB=0.291648;DP=2821;DP4=1268,1426,8,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35151e-05;MQSB=0.663974;RPB=0.879824;SGB=71.8647;VDB=0.410713;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Ttc|L140F|583|LOC_Os12g04520|protein_coding|CODING|LOC_Os12g04520.1|1|1) FN-308.SNP.12:1930382 chr12:001930382 0 W/1930382-1930382 FN-308 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g04540 expressed protein SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2665-S.SNP.12:1933607 chr12:001933607 0 W/1933607-1933607 FN2665-S SNP A -> C AC=1;AN=200;BQB=0.726733;DP=4658;DP4=2223,2250,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00128811;MQB=1.26182e-15;MQSB=0.906932;RPB=0.693783;SGB=83.5316;VDB=0.339025;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agT/agG|S62R|166|LOC_Os12g04550|protein_coding|CODING|LOC_Os12g04550.1|1|1) FN4075-S.SNP.12:1935340 chr12:001935340 0 W/1935340-1935340 FN4075-S SNP G -> C AC=1;AN=182;BQB=0.993303;DP=2759;DP4=1368,1332,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0057992;MQB=0.000843858;MQSB=1.47108e-10;RPB=0.474463;SGB=30.5793;VDB=0.333755;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E54Q|236|LOC_Os12g04570|protein_coding|CODING|LOC_Os12g04570.1|2|1) FN-402.SNP.12:1937639 chr12:001937639 0 W/1937639-1937639 FN-402 Single Base Substitution A-C INTERGENIC HOMO SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2086-S.SNP.12:1938920 chr12:001938920 0 W/1938920-1938920 FN2086-S SNP G -> A AC=2;AN=168;BQB=0.975074;DP=3221;DP4=1917,1214,28,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.82064e-30;MQSB=0.0474896;RPB=0.817016;SGB=119.417;VDB=0.0171454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.12:1949216 chr12:001949216 0 W/1949216-1949216 FN3839-S SNP G -> A AC=1;AN=190;BQB=0.94845;DP=2679;DP4=1269,1320,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.60665e-12;MQSB=0.976266;RPB=0.256213;SGB=80.9724;VDB=0.488788;EFF=INTERGENIC(MODIFIER||||||||||1) FN1129-S.SNP.12:1954228 chr12:001954228 0 W/1954228-1954228 FN1129-S Single Base Substitution T-G INTERGENIC HOMO SNo: 998, Mutant_ID: FN1129-S, Generation: M2, Mutations: 54, Genes: 35, Seed availability: Yes. FN625-S.SNP.12:1954918 chr12:001954918 0 W/1954918-1954918 FN625-S Single Base Substitution C-A INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN625-S.SNP.12:1954925 chr12:001954925 0 W/1954925-1954925 FN625-S Single Base Substitution G-A INTERGENIC HOMO SNo: 590, Mutant_ID: FN625-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN3309-S.SNP.12:1955703 chr12:001955703 0 W/1955703-1955703 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.974528;DP=5179;DP4=2963,2047,16,20;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.0878548;MQB=0.129997;MQSB=0;RPB=0.455204;SGB=157.265;VDB=0.75125;EFF=INTERGENIC(MODIFIER||||||||||1) FN3562-S.SNP.12:1956254 chr12:001956254 0 W/1956254-1956254 FN3562-S SNP G -> A AC=1;AN=188;BQB=0.532914;DP=4667;DP4=1654,2916,16,14;HOB=5.65867e-05;ICB=0.000113775;MQ=13;MQ0F=0.472038;MQB=0.0288722;MQSB=0;RPB=0.424743;SGB=130.758;VDB=0.883559;EFF=INTERGENIC(MODIFIER||||||||||1) FN2157-S.SNP.12:1965598 chr12:001965598 0 W/1965598-1965598 FN2157-S SNP A -> G AC=1;AN=168;BQB=0.000421518;DP=3286;DP4=1527,1710,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000304321;MQB=0.000113787;MQSB=0.979438;RPB=0.304303;SGB=-218.331;VDB=0.441178;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.12:1971869 chr12:001971869 0 W/1971869-1971869 FN3698-S SNP G -> A AC=1;AN=190;BQB=0.984556;DP=2947;DP4=1414,1443,12,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.17998e-12;MQSB=0.923116;RPB=0.254345;SGB=80.9724;VDB=0.136142;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.12:1972384 chr12:001972384 0 W/1972384-1972384 FN1240-S Single Base Substitution A-G INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4133-S.SNP.12:1977412 chr12:001977412 0 W/1977412-1977412 FN4133-S SNP A -> G AC=1;AN=182;BQB=0.892007;DP=3150;DP4=952,2097,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.01542e-06;MQSB=1.13179e-08;RPB=0.941331;SGB=62.1548;VDB=0.428916;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.12:1977768 chr12:001977768 0 W/1977768-1977768 FN3520-S SNP C -> A AC=1;AN=188;BQB=0.954746;DP=2659;DP4=1175,1405,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=28;MQ0F=0.151937;MQB=0.368395;MQSB=0;RPB=0.32966;SGB=44.4357;VDB=0.821459;EFF=INTERGENIC(MODIFIER||||||||||1) FN1193-S.SNP.12:1995690 chr12:001995690 0 W/1995690-1995690 FN1193-S Single Base Substitution C-T INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN1188-S.SNP.12:1996238 chr12:001996238 0 W/1996238-1996238 FN1188-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1024, Mutant_ID: FN1188-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN2670-S.SNP.12:1997742 chr12:001997742 0 W/1997742-1997742 FN2670-S SNP G -> T AC=1;AN=200;BQB=0.741771;DP=4637;DP4=2164,2152,23,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83833e-21;MQSB=0.99473;RPB=0.988495;SGB=115.978;VDB=0.666785;EFF=INTERGENIC(MODIFIER||||||||||1) FN728-S.SNP.12:2001816 chr12:002001816 0 W/2001816-2001816 FN728-S Single Base Substitution G-A INTERGENIC HOMO SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN1730-S.SNP.12:2004064 chr12:002004064 0 W/2004064-2004064 FN1730-S SNP C -> T AC=1;AN=188;BQB=0.469136;DP=3823;DP4=1971,1800,12,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.83766e-13;MQSB=0.858013;RPB=0.778913;SGB=-155.916;VDB=0.897114;EFF=INTERGENIC(MODIFIER||||||||||1) FN-215.SNP.12:2006780 chr12:002006780 0 W/2006780-2006780 FN-215 Single Base Substitution G-A INTERGENIC HET SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3851-S.SNP.12:2007052 chr12:002007052 0 W/2007052-2007052 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.965117;DP=2530;DP4=1060,1328,2,12;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00197628;MQB=1.66281e-07;MQSB=0.0230856;RPB=0.448091;SGB=37.4429;VDB=0.444006;EFF=INTERGENIC(MODIFIER||||||||||1) FN4153-S.SNP.12:2009985 chr12:002009985 0 W/2009985-2009985 FN4153-S SNP G -> A AC=1;AN=170;BQB=0.91689;DP=2327;DP4=1068,1188,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.30089e-05;MQSB=0.970165;RPB=0.748606;SGB=24.5502;VDB=0.828364;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.12:2012310 chr12:002012310 0 W/2012310-2012310 FN2455 SNP G -> A AC=1;AN=200;BQB=0.92946;DP=4196;DP4=2080,1784,15,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.1317e-12;MQSB=0.926975;RPB=0.803157;SGB=17.5158;VDB=0.428789;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.12:2015869 chr12:002015869 0 W/2015869-2015869 FN3529-S SNP A -> T AC=1;AN=188;BQB=0.897296;DP=3564;DP4=1995,1373,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.01373e-05;MQSB=0.987877;RPB=0.981899;SGB=48.979;VDB=0.659945;EFF=INTRON(MODIFIER||||228|LOC_Os12g04740|protein_coding|CODING|LOC_Os12g04740.1|1|1),INTRON(MODIFIER||||227|LOC_Os12g04740|protein_coding|CODING|LOC_Os12g04740.2|1|1),INTRON(MODIFIER||||154|LOC_Os12g04740|protein_coding|CODING|LOC_Os12g04740.3|1|1) FN1493-S.SNP.12:2016575 chr12:002016575 0 W/2016575-2016575 FN1493-S Single Base Substitution G-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2541-S.SNP.12:2018286 chr12:002018286 0 W/2018286-2018286 FN2541-S SNP A -> T AC=2;AN=198;BQB=0.449497;DP=4481;DP4=2123,2159,19,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.00701e-24;MQSB=0.933079;RPB=0.402771;SGB=169.022;VDB=0.540353;EFF=INTRON(MODIFIER||||593|LOC_Os12g04750|protein_coding|CODING|LOC_Os12g04750.1|12|1) FN2541-S.SNP.12:2018287 chr12:002018287 0 W/2018287-2018287 FN2541-S SNP A -> T AC=2;AN=198;BQB=0.686489;DP=4492;DP4=2121,2175,20,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.39455e-22;MQSB=0.942427;RPB=0.542555;SGB=89.0321;VDB=0.662893;EFF=INTRON(MODIFIER||||593|LOC_Os12g04750|protein_coding|CODING|LOC_Os12g04750.1|12|1) FN727-S.SNP.12:2030426 chr12:002030426 0 W/2030426-2030426 FN727-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g04770 expressed protein SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN1020-S.SNP.12:2036450 chr12:002036450 0 W/2036450-2036450 FN1020-S Single Base Substitution A-T INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN2619-S.SNP.12:2036546 chr12:002036546 0 W/2036546-2036546 FN2619-S SNP G -> A AC=1;AN=198;BQB=0.82881;DP=4301;DP4=2152,1922,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.71663e-15;MQSB=0.848211;RPB=0.721388;SGB=83.2905;VDB=0.776301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.12:2043310 chr12:002043310 0 W/2043310-2043310 FN3933-S SNP G -> T AC=2;AN=158;BQB=0.994015;DP=2534;DP4=1051,1333,19,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=8.20821e-17;MQSB=0.840293;RPB=0.146418;SGB=98.093;VDB=0.584687;EFF=INTRON(MODIFIER||||199|LOC_Os12g04790|protein_coding|CODING|LOC_Os12g04790.1|1|1) FN3756-S.SNP.12:2048704 chr12:002048704 0 W/2048704-2048704 FN3756-S SNP G -> A AC=2;AN=190;BQB=0.773756;DP=2632;DP4=1426,1062,11,16;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0205167;MQB=2.22396e-07;MQSB=0.946767;RPB=0.989473;SGB=85.8548;VDB=0.676623;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.12:2056500 chr12:002056500 0 W/2056500-2056500 FN3607-S SNP A -> T AC=1;AN=190;BQB=0.999948;DP=2849;DP4=1287,1444,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.004563;MQB=4.75951e-05;MQSB=0.00396939;RPB=0.999604;SGB=32.5467;VDB=0.394296;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D1520V|1648|LOC_Os12g04810|protein_coding|CODING|LOC_Os12g04810.1|7|1) FN2596-S.SNP.12:2059026 chr12:002059026 0 W/2059026-2059026 FN2596-S SNP C -> T AC=1;AN=198;BQB=0.994182;DP=5091;DP4=2443,2390,18,16;HOB=5.10152e-05;ICB=0.000102546;MQ=25;MQ0F=0.194657;MQB=0.0485235;MQSB=0;RPB=0.67007;SGB=34.8713;VDB=0.507756;EFF=INTERGENIC(MODIFIER||||||||||1) FN980-S.SNP.12:2061828 chr12:002061828 0 W/2061828-2061828 FN980-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g04820 retrotransposon protein, putative, unclassified, expressed SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1221-S.SNP.12:2062529 chr12:002062529 0 W/2062529-2062529 FN1221-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g04820 retrotransposon protein, putative, unclassified, expressed SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN1080-S.SNP.12:2066555 chr12:002066555 0 W/2066555-2066555 FN1080-S Single Base Substitution C-T INTERGENIC HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3505-S.SNP.12:2066821 chr12:002066821 0 W/2066821-2066821 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.889627;DP=3034;DP4=1420,1530,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.82976e-12;MQSB=0.947325;RPB=0.571865;SGB=53.7007;VDB=0.368943;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.12:2066822 chr12:002066822 0 W/2066822-2066822 FN3505-S SNP C -> T AC=1;AN=188;BQB=0.840136;DP=3040;DP4=1418,1532,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.2205e-09;MQSB=0.857845;RPB=0.776966;SGB=62.6088;VDB=0.43455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2175-S.SNP.12:2073079 chr12:002073079 0 W/2073079-2073079 FN2175-S SNP G -> A AC=1;AN=168;BQB=0.054444;DP=3449;DP4=1801,1600,17,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.12571e-09;MQSB=0.953863;RPB=0.519897;SGB=-137.195;VDB=0.608278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E831K|1539|LOC_Os12g04830|protein_coding|CODING|LOC_Os12g04830.1|4|1) FN3626-S.SNP.12:2081416 chr12:002081416 0 W/2081416-2081416 FN3626-S SNP T -> A AC=1;AN=190;BQB=0.86136;DP=2933;DP4=1329,1459,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.39381e-11;MQSB=0.872519;RPB=0.983992;SGB=80.9724;VDB=0.787875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAc/cTc|H849L|1472|LOC_Os12g04840|protein_coding|CODING|LOC_Os12g04840.1|5|1) FN1033-S.SNP.12:2082211 chr12:002082211 0 W/2082211-2082211 FN1033-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g04840 retrotransposon protein, putative, unclassified, expressed SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN1033-S.SNP.12:2082218 chr12:002082218 0 W/2082218-2082218 FN1033-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g04840 retrotransposon protein, putative, unclassified, expressed SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2218-S.SNP.12:2085048 chr12:002085048 0 W/2085048-2085048 FN2218-S SNP G -> T AC=1;AN=190;BQB=0.837755;DP=4689;DP4=2359,1984,19,13;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00042653;MQB=1.25144e-15;MQSB=0.30685;RPB=0.901759;SGB=67.0756;VDB=0.565641;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.12:2087830 chr12:002087830 0 W/2087830-2087830 FN2226-S SNP C -> A AC=1;AN=190;BQB=0.998896;DP=4943;DP4=2478,2186,18,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.9069e-17;MQSB=0.810016;RPB=0.695245;SGB=64.5217;VDB=0.254292;EFF=UTR_3_PRIME(MODIFIER||1426||259|LOC_Os12g04860|protein_coding|CODING|LOC_Os12g04860.1|1|1),UTR_3_PRIME(MODIFIER||1426||259|LOC_Os12g04860|protein_coding|CODING|LOC_Os12g04860.2|2|1) FN1471-S.SNP.12:2088798 chr12:002088798 0 W/2088798-2088798 FN1471-S SNP C -> A AC=1;AN=188;BQB=0.818052;DP=3563;DP4=1633,1883,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.8624e-07;MQSB=0.948077;RPB=0.351099;SGB=43.0708;VDB=0.108892;EFF=UTR_3_PRIME(MODIFIER||458||259|LOC_Os12g04860|protein_coding|CODING|LOC_Os12g04860.1|1|1),INTRON(MODIFIER||||259|LOC_Os12g04860|protein_coding|CODING|LOC_Os12g04860.2|1|1) FN2364.SNP.12:2095613 chr12:002095613 0 W/2095613-2095613 FN2364 SNP C -> T AC=2;AN=192;BQB=0.978081;DP=4965;DP4=2429,2232,27,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.11028e-28;MQSB=0.969045;RPB=0.876302;SGB=168.097;VDB=0.21738;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T185|649|LOC_Os12g04880|protein_coding|CODING|LOC_Os12g04880.1|1|1),INTRON(MODIFIER||||115|LOC_Os12g04880|protein_coding|CODING|LOC_Os12g04880.2|1|1) FN1490-S.SNP.12:2099729 chr12:002099729 0 W/2099729-2099729 FN1490-S Single Base Substitution C-T INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN1456-S.SNP.12:2103050 chr12:002103050 0 W/2103050-2103050 FN1456-S Single Base Substitution C-T INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN3957-S.SNP.12:2103275 chr12:002103275 0 W/2103275-2103275 FN3957-S SNP C -> T AC=2;AN=168;BQB=0.689931;DP=1265;DP4=483,676,4,7;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=0.000971426;MQSB=0.031271;RPB=0.936964;SGB=43.3113;VDB=0.906218;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.12:2103654 chr12:002103654 0 W/2103654-2103654 FN1357-S Single Base Substitution C-T INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN2631-S.SNP.12:2108499 chr12:002108499 0 W/2108499-2108499 FN2631-S SNP C -> T AC=1;AN=200;BQB=0.710721;DP=4307;DP4=2556,1545,17,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00162526;MQB=4.7807e-12;MQSB=0.411369;RPB=0.752599;SGB=76.3213;VDB=0.902899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.12:2109097 chr12:002109097 0 W/2109097-2109097 FN3824-S SNP C -> T AC=1;AN=190;BQB=0.999843;DP=3440;DP4=1883,1470,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00232558;MQB=0.0671197;MQSB=6.75079e-27;RPB=0.606162;SGB=71.8647;VDB=0.431899;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L191|1351|LOC_Os12g04910|protein_coding|CODING|LOC_Os12g04910.1|1|1) FN4150-S.SNP.12:2127073 chr12:002127073 0 W/2127073-2127073 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.989196;DP=1595;DP4=848,693,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000395315;MQSB=0.904525;RPB=0.99711;SGB=30.1021;VDB=0.346875;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.12:2142255 chr12:002142255 0 W/2142255-2142255 FN-218 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN3796-S.SNP.12:2161297 chr12:002161297 0 W/2161297-2161297 FN3796-S SNP A -> T AC=1;AN=188;BQB=0.999961;DP=2585;DP4=1317,1159,8,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.37049e-07;MQSB=0.948039;RPB=0.969374;SGB=39.9877;VDB=0.505179;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.12:2167369 chr12:002167369 0 W/2167369-2167369 FN2532-S SNP T -> A AC=1;AN=198;BQB=0.785373;DP=4170;DP4=1870,2040,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.32136e-15;MQSB=0.999584;RPB=0.822801;SGB=109.285;VDB=0.700728;EFF=INTRON(MODIFIER||||707|LOC_Os12g04990|protein_coding|CODING|LOC_Os12g04990.1|8|1),INTRON(MODIFIER||||703|LOC_Os12g04990|protein_coding|CODING|LOC_Os12g04990.2|8|1),INTRON(MODIFIER||||683|LOC_Os12g04990|protein_coding|CODING|LOC_Os12g04990.3|7|1),INTRON(MODIFIER||||526|LOC_Os12g04990|protein_coding|CODING|LOC_Os12g04990.4|8|1),INTRON(MODIFIER||||372|LOC_Os12g04990|protein_coding|CODING|LOC_Os12g04990.5|8|1) FN3657-S.SNP.12:2172570 chr12:002172570 0 W/2172570-2172570 FN3657-S SNP G -> A AC=2;AN=190;BQB=0.9048;DP=3135;DP4=1421,1608,14,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.52187e-13;MQSB=0.969304;RPB=0.982079;SGB=103.742;VDB=0.754946;EFF=INTRON(MODIFIER||||245|LOC_Os12g05000|protein_coding|CODING|LOC_Os12g05000.1|3|1) FN3804-S.SNP.12:2177510 chr12:002177510 0 W/2177510-2177510 FN3804-S SNP A -> C AC=2;AN=188;BQB=0.765652;DP=2893;DP4=1423,1313,22,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.74377e-22;MQSB=0.988592;RPB=0.622597;SGB=136.329;VDB=0.325673;EFF=INTRON(MODIFIER||||141|LOC_Os12g05010|protein_coding|CODING|LOC_Os12g05010.1|1|1) FN1269-S.SNP.12:2181166 chr12:002181166 0 W/2181166-2181166 FN1269-S Single Base Substitution G-T INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN1071-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN1071-S Single Base Substitution C-T INTERGENIC HOMO SNo: 958, Mutant_ID: FN1071-S, Generation: M2, Mutations: 59, Genes: 19, Seed availability: Yes. FN2220-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN2220-S SNP C -> T AC=2;AN=190;BQB=0.435795;DP=4618;DP4=2144,2165,26,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000216544;MQB=4.30817e-26;MQSB=0.762059;RPB=0.165381;SGB=63.1584;VDB=0.00468503;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN2347 SNP C -> T AC=2;AN=192;BQB=0.99924;DP=4744;DP4=2374,2049,38,27;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.73453e-37;MQSB=0.220175;RPB=0.927673;SGB=12.8844;VDB=0.198858;EFF=INTERGENIC(MODIFIER||||||||||1) FN2589-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN2589-S SNP C -> T AC=2;AN=198;BQB=0.52244;DP=4252;DP4=2142,1879,16,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.81693e-14;MQSB=0.884604;RPB=0.961699;SGB=26.8957;VDB=0.63098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3105-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN3105-S SNP C -> T AC=1;AN=184;BQB=0.1278;DP=3685;DP4=1818,1716,14,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.12659e-09;MQSB=0.999898;RPB=0.999195;SGB=-11.5833;VDB=0.822619;EFF=INTERGENIC(MODIFIER||||||||||1) FN4240-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.702047;DP=2503;DP4=1185,1226,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.01708e-06;MQSB=0.989076;RPB=0.880988;SGB=10.1134;VDB=0.134903;EFF=INTERGENIC(MODIFIER||||||||||1) FN821-S.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN821-S Single Base Substitution C-T INTERGENIC HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN_829-2-5.SNP.12:2183457 chr12:002183457 0 W/2183457-2183457 FN_829-2-5 Single Base Substitution C-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN540-S.SNP.12:2184946 chr12:002184946 0 W/2184946-2184946 FN540-S Single Base Substitution A-G INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN1050-S.SNP.12:2184955 chr12:002184955 0 W/2184955-2184955 FN1050-S Single Base Substitution C-A INTERGENIC HOMO SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1250-S.SNP.12:2186867 chr12:002186867 0 W/2186867-2186867 FN1250-S Single Base Substitution T-A INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1250-S.SNP.12:2186869 chr12:002186869 0 W/2186869-2186869 FN1250-S Single Base Substitution C-A INTERGENIC HET SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1509-S.SNP.12:2186916 chr12:002186916 0 W/2186916-2186916 FN1509-S Single Base Substitution A-G INTERGENIC Homo SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN1690-S.SNP.12:2192875 chr12:002192875 0 W/2192875-2192875 FN1690-S SNP G -> T AC=1;AN=188;BQB=0.498225;DP=3358;DP4=2147,1175,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.31525e-07;MQSB=0.93513;RPB=0.817551;SGB=28.6195;VDB=0.244727;EFF=INTERGENIC(MODIFIER||||||||||1) FN2089-S.SNP.12:2204429 chr12:002204429 0 W/2204429-2204429 FN2089-S SNP T -> C AC=1;AN=168;BQB=0.114156;DP=3791;DP4=1865,1881,13,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.08027e-08;MQSB=0.99985;RPB=0.995703;SGB=-100.631;VDB=0.582488;EFF=INTERGENIC(MODIFIER||||||||||1) FN515-S.SNP.12:2211031 chr12:002211031 0 W/2211031-2211031 FN515-S Single Base Substitution A-G INTERGENIC HOMO SNo: 513, Mutant_ID: FN515-S, Generation: M2, Mutations: 50, Genes: 61, Seed availability: Yes. FN700-S.SNP.12:2214934 chr12:002214934 0 W/2214934-2214934 FN700-S Single Base Substitution G-C INTERGENIC HET SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN3632-S.SNP.12:2221028 chr12:002221028 0 W/2221028-2221028 FN3632-S SNP A -> G AC=1;AN=190;BQB=0.984159;DP=2959;DP4=1494,1279,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12857e-10;MQSB=0.882539;RPB=0.997993;SGB=31.3213;VDB=0.683611;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.12:2230479 chr12:002230479 0 W/2230479-2230479 FN4110-S SNP A -> T AC=1;AN=182;BQB=0.884884;DP=3182;DP4=1383,1619,17,14;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=6.28453e-18;MQSB=0.979158;RPB=0.87813;SGB=98.8232;VDB=0.694454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.12:2236289 chr12:002236289 0 W/2236289-2236289 FN2207-S SNP G -> C AC=1;AN=190;BQB=0.186765;DP=4390;DP4=1985,2117,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022779;MQB=8.19909e-07;MQSB=0.775293;RPB=0.886735;SGB=28.9929;VDB=0.54425;EFF=INTRON(MODIFIER||||370|LOC_Os12g05090|protein_coding|CODING|LOC_Os12g05090.1|1|1) FN2750-S.SNP.12:2260705 chr12:002260705 0 W/2260705-2260705 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.993249;DP=2470;DP4=2105,191,12,0;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.91223e-08;MQSB=0.997149;RPB=0.455254;SGB=49.6594;VDB=0.489788;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.12:2262725 chr12:002262725 0 W/2262725-2262725 FN2461 SNP C -> A AC=1;AN=200;BQB=0.178553;DP=3961;DP4=2021,1681,18,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.7716e-12;MQSB=0.996454;RPB=0.877618;SGB=52.9314;VDB=0.955403;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.12:2270893 chr12:002270893 0 W/2270893-2270893 FN2274-S SNP G -> A AC=1;AN=190;BQB=0.705013;DP=4542;DP4=2018,2044,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00220167;MQB=7.20637e-06;MQSB=0.00370213;RPB=0.879081;SGB=90.0802;VDB=0.480572;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.12:2271277 chr12:002271277 0 W/2271277-2271277 FN1665-S Single Base Substitution G-T INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN3347-S.SNP.12:2276265 chr12:002276265 0 W/2276265-2276265 FN3347-S SNP T -> G AC=1;AN=184;BQB=0.992942;DP=2539;DP4=870,1495,1,13;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.52272e-07;MQSB=0.630612;RPB=0.240609;SGB=39.2697;VDB=0.844934;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.12:2281230 chr12:002281230 0 W/2281230-2281230 FN1497-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g05160 transposon protein, putative, Mutator sub-class, expressed SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN3826-S.SNP.12:2288256 chr12:002288256 0 W/2288256-2288256 FN3826-S SNP A -> G AC=1;AN=188;BQB=0.651944;DP=2693;DP4=1378,1161,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04083e-06;MQSB=0.983848;RPB=0.997869;SGB=62.7569;VDB=0.674156;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.12:2293011 chr12:002293011 0 W/2293011-2293011 CW-631-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN3381-S.SNP.12:2295873 chr12:002295873 0 W/2295873-2295873 FN3381-S SNP C -> T AC=1;AN=184;BQB=0.886461;DP=3187;DP4=1909,1117,13,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0539e-10;MQSB=0.89979;RPB=0.0943094;SGB=-14.714;VDB=0.278652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3637-S.SNP.12:2296726 chr12:002296726 0 W/2296726-2296726 FN3637-S SNP G -> C AC=1;AN=190;BQB=0.999731;DP=2772;DP4=1283,1361,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.61382e-07;MQSB=0.869558;RPB=0.680282;SGB=36.1006;VDB=0.152434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1277-S.SNP.12:2302478 chr12:002302478 0 W/2302478-2302478 FN1277-S Single Base Substitution C-T INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN747-S.SNP.12:2306675 chr12:002306675 0 W/2306675-2306675 FN747-S Single Base Substitution A-T SPLICE_SITE_REGION HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN3500-S.SNP.12:2307137 chr12:002307137 0 W/2307137-2307137 FN3500-S SNP C -> A AC=1;AN=188;BQB=0.92907;DP=2064;DP4=831,1149,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.09946e-07;MQSB=0.00921648;RPB=0.99628;SGB=48.979;VDB=0.0675484;EFF=INTRON(MODIFIER||||280|LOC_Os12g05200|protein_coding|CODING|LOC_Os12g05200.1|3|1) FN4240-S.SNP.12:2316259 chr12:002316259 0 W/2316259-2316259 FN4240-S SNP A -> C AC=1;AN=170;BQB=0.999232;DP=2611;DP4=1301,1172,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.72895e-08;MQSB=0.971115;RPB=0.939692;SGB=56.7575;VDB=0.827836;EFF=INTRON(MODIFIER||||253|LOC_Os12g05220|protein_coding|CODING|LOC_Os12g05220.1|3|1) FN3692-S.SNP.12:2317394 chr12:002317394 0 W/2317394-2317394 FN3692-S SNP C -> A AC=1;AN=190;BQB=0.908185;DP=2836;DP4=1424,1304,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.6713e-09;MQSB=0.994818;RPB=0.00694398;SGB=62.7569;VDB=0.0137432;EFF=STOP_GAINED(HIGH|NONSENSE|Gaa/Taa|E23*|253|LOC_Os12g05220|protein_coding|CODING|LOC_Os12g05220.1|1|1);LOF=(LOC_Os12g05220|LOC_Os12g05220|1|1.00);NMD=(LOC_Os12g05220|LOC_Os12g05220|1|1.00) FN938-S.SNP.12:2322249 chr12:002322249 0 W/2322249-2322249 FN938-S Single Base Substitution C-G INTERGENIC HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3918-S.SNP.12:2324001 chr12:002324001 0 W/2324001-2324001 FN3918-S SNP C -> T AC=2;AN=158;BQB=0.865281;DP=2265;DP4=1092,1070,17,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.35088e-16;MQSB=0.999992;RPB=0.728361;SGB=84.6152;VDB=0.490813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1009-S.SNP.12:2333492 chr12:002333492 0 W/2333492-2333492 FN1009-S Single Base Substitution A-G INTERGENIC HET SNo: 910, Mutant_ID: FN1009-S, Generation: M2, Mutations: 65, Genes: 22, Seed availability: No. FN1652-S.SNP.12:2340456 chr12:002340456 0 W/2340456-2340456 FN1652-S Single Base Substitution A-G INTERGENIC Homo SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN347-S.SNP.12:2346729 chr12:002346729 0 W/2346729-2346729 FN347-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g05270 zinc finger, C3HC4 type domain containing protein, expressed SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1670-S.SNP.12:2347223 chr12:002347223 0 W/2347223-2347223 FN1670-S SNP C -> T AC=1;AN=188;BQB=0.558353;DP=2377;DP4=1400,943,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00069812;MQSB=0.200513;RPB=0.860775;SGB=-2.17824;VDB=0.393696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H261Y|277|LOC_Os12g05270|protein_coding|CODING|LOC_Os12g05270.1|1|1) FN457-S.SNP.12:2361139 chr12:002361139 0 W/2361139-2361139 FN457-S Single Base Substitution G-A INTERGENIC HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN620-S.SNP.12:2383063 chr12:002383063 0 W/2383063-2383063 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3906-S.SNP.12:2387085 chr12:002387085 0 W/2387085-2387085 FN3906-S SNP C -> A AC=1;AN=158;BQB=0.631702;DP=1932;DP4=954,880,4,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000872611;MQSB=0.74805;RPB=0.993526;SGB=25.2211;VDB=0.92631;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.12:2388292 chr12:002388292 0 W/2388292-2388292 FN1405-S Single Base Substitution A-C INTERGENIC HET SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3729-S.SNP.12:2391088 chr12:002391088 0 W/2391088-2391088 FN3729-S SNP T -> A AC=2;AN=190;BQB=0.940563;DP=2874;DP4=1410,1344,18,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.59123e-13;MQSB=0.977165;RPB=0.953271;SGB=85.8548;VDB=0.715351;EFF=INTRON(MODIFIER||||216|LOC_Os12g05320|protein_coding|CODING|LOC_Os12g05320.1|2|1),INTRON(MODIFIER||||216|LOC_Os12g05320|protein_coding|CODING|LOC_Os12g05320.2|2|1) FN2340.SNP.12:2394729 chr12:002394729 0 W/2394729-2394729 FN2340 SNP G -> C AC=1;AN=192;BQB=0.675678;DP=5309;DP4=2331,2651,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09441e-14;MQSB=0.992634;RPB=0.857647;SGB=-9.68954;VDB=0.289724;EFF=INTRON(MODIFIER||||216|LOC_Os12g05320|protein_coding|CODING|LOC_Os12g05320.1|7|1),INTRON(MODIFIER||||216|LOC_Os12g05320|protein_coding|CODING|LOC_Os12g05320.2|6|1) FN3872-S.SNP.12:2404730 chr12:002404730 0 W/2404730-2404730 FN3872-S SNP G -> A AC=1;AN=158;BQB=0.996468;DP=2616;DP4=1332,1158,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.38429e-06;MQSB=0.965109;RPB=0.731187;SGB=14.3409;VDB=0.169706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.12:2423086 chr12:002423086 0 W/2423086-2423086 FN2593-S SNP G -> A AC=1;AN=198;BQB=0.936454;DP=4095;DP4=1760,2086,12,27;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.0002442;MQB=5.14e-23;MQSB=0.935132;RPB=0.0898733;SGB=86.437;VDB=0.240864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3558-S.SNP.12:2435948 chr12:002435948 0 W/2435948-2435948 FN3558-S SNP G -> T AC=1;AN=188;BQB=0.958835;DP=2680;DP4=1378,1125,11,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.90714e-08;MQSB=0.724381;RPB=0.952483;SGB=23.5329;VDB=0.855535;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.12:2450856 chr12:002450856 0 W/2450856-2450856 FN2392 SNP C -> A AC=1;AN=200;BQB=0.813305;DP=3855;DP4=1976,1567,12,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20235e-08;MQSB=0.0986211;RPB=0.987739;SGB=65.5058;VDB=0.887529;EFF=INTRON(MODIFIER||||145|LOC_Os12g05410|protein_coding|CODING|LOC_Os12g05410.1|3|1),INTRON(MODIFIER||||145|LOC_Os12g05410|protein_coding|CODING|LOC_Os12g05410.2|3|1) FN3815-S.SNP.12:2459523 chr12:002459523 0 W/2459523-2459523 FN3815-S SNP G -> T AC=1;AN=188;BQB=0.971211;DP=3071;DP4=1232,1731,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.30475e-07;MQSB=0.775216;RPB=0.951166;SGB=25.439;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN_822-5-1.SNP.12:2461217 chr12:002461217 0 W/2461217-2461217 FN_822-5-1 Single Base Substitution A-G HET LOC_Os12g05430 ribosomal protein L24, putative, expressed SNo: 1492, Mutant_ID: FN_822-5-1, Generation: M3, Mutations: 58, Genes: 105, Seed availability: Yes. FN1375-S.SNP.12:2476959 chr12:002476959 0 W/2476959-2476959 FN1375-S Single Base Substitution C-T INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3981-S.SNP.12:2477764 chr12:002477764 0 W/2477764-2477764 FN3981-S SNP A -> T AC=1;AN=168;BQB=0.677946;DP=3154;DP4=1481,1548,5,6;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0291693;MQB=0.441543;MQSB=0.743997;RPB=0.760345;SGB=12.4615;VDB=0.571148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2498.SNP.12:2478991 chr12:002478991 0 W/2478991-2478991 FN2498 SNP T -> A AC=2;AN=200;BQB=0.365085;DP=4105;DP4=1646,2017,19,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.38836e-15;MQSB=0.0042806;RPB=0.402509;SGB=-83.4175;VDB=0.275078;EFF=INTERGENIC(MODIFIER||||||||||1) FN581-S.SNP.12:2479773 chr12:002479773 0 W/2479773-2479773 FN581-S Single Base Substitution G-A INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1419-S.SNP.12:2482500 chr12:002482500 0 W/2482500-2482500 FN1419-S Single Base Substitution C-T INTERGENIC HET SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1423-S.SNP.12:2486570 chr12:002486570 0 W/2486570-2486570 FN1423-S Single Base Substitution C-T INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3998-S.SNP.12:2488836 chr12:002488836 0 W/2488836-2488836 FN3998-S SNP A -> G AC=2;AN=168;BQB=0.817449;DP=2640;DP4=1153,1394,11,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.92512e-17;MQSB=0.955283;RPB=0.899243;SGB=131.927;VDB=0.79462;EFF=INTERGENIC(MODIFIER||||||||||1) FN516-S.SNP.12:2492560 chr12:002492560 0 W/2492560-2492560 FN516-S Single Base Substitution A-G INTERGENIC HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN-371.SNP.12:2504795 chr12:002504795 0 W/2504795-2504795 FN-371 Single Base Substitution G-A INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1073-S.SNP.12:2504955 chr12:002504955 0 W/2504955-2504955 FN1073-S Single Base Substitution C-T INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN2752-S.SNP.12:2507640 chr12:002507640 0 W/2507640-2507640 FN2752-S SNP A -> G AC=1;AN=200;BQB=0.80821;DP=4642;DP4=2483,1923,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1094e-10;MQSB=0.980947;RPB=0.474301;SGB=6.27959;VDB=0.98429;EFF=INTERGENIC(MODIFIER||||||||||1) FN1325-S.SNP.12:2516431 chr12:002516431 0 W/2516431-2516431 FN1325-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g05500 retrotransposon protein, putative, unclassified, expressed SNo: 1128, Mutant_ID: FN1325-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN962-S.SNP.12:2516603 chr12:002516603 0 W/2516603-2516603 FN962-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN2602-S.SNP.12:2518013 chr12:002518013 0 W/2518013-2518013 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.64905;DP=3834;DP4=1906,1711,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000260824;MQB=9.77732e-14;MQSB=0.86735;RPB=0.356013;SGB=15.7299;VDB=0.865279;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D221|692|LOC_Os12g05500|protein_coding|CODING|LOC_Os12g05500.1|3|1) FN2553-S.SNP.12:2521157 chr12:002521157 0 W/2521157-2521157 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.997409;DP=4240;DP4=2060,1925,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.1482e-06;MQSB=0.965933;RPB=0.608429;SGB=32.9588;VDB=0.783145;EFF=INTERGENIC(MODIFIER||||||||||1) FN-217.SNP.12:2521452 chr12:002521452 0 W/2521452-2521452 FN-217 Single Base Substitution T-C INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN3491-S.SNP.12:2526841 chr12:002526841 0 W/2526841-2526841 FN3491-S SNP C -> A AC=2;AN=188;BQB=0.867838;DP=2990;DP4=1554,1380,15,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.77021e-10;MQSB=0.963702;RPB=0.623808;SGB=60.7873;VDB=0.146847;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.12:2541961 chr12:002541961 0 W/2541961-2541961 FN1006-S Single Base Substitution G-A INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1006-S.SNP.12:2541962 chr12:002541962 0 W/2541962-2541962 FN1006-S Single Base Substitution C-A INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1553-S.SNP.12:2551406 chr12:002551406 0 W/2551406-2551406 FN1553-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g05560 expressed protein SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN2375.SNP.12:2553250 chr12:002553250 0 W/2553250-2553250 FN2375 SNP A -> C AC=1;AN=192;BQB=0.984458;DP=4402;DP4=2115,2017,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.745e-08;MQSB=0.819901;RPB=0.807394;SGB=53.7748;VDB=0.840039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1375-S.SNP.12:2558077 chr12:002558077 0 W/2558077-2558077 FN1375-S Single Base Substitution C-A INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN1513-S.SNP.12:2559991 chr12:002559991 0 W/2559991-2559991 FN1513-S Single Base Substitution G-A INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1236-S.SNP.12:2564216 chr12:002564216 0 W/2564216-2564216 FN1236-S Single Base Substitution T-G INTERGENIC HET SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN-60.SNP.12:2573274 chr12:002573274 0 W/2573274-2573274 FN-60 Single Base Substitution C-T INTRON HOMO SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN859-S.SNP.12:2578588 chr12:002578588 0 W/2578588-2578588 FN859-S Single Base Substitution A-T INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN861-S.SNP.12:2579428 chr12:002579428 0 W/2579428-2579428 FN861-S Single Base Substitution C-T INTERGENIC HET SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN-288.SNP.12:2596696 chr12:002596696 0 W/2596696-2596696 FN-288 Single Base Substitution C-T INTRON HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN894-S.SNP.12:2603125 chr12:002603125 0 W/2603125-2603125 FN894-S Single Base Substitution G-A INTRON HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN3928-S.SNP.12:2612743 chr12:002612743 0 W/2612743-2612743 FN3928-S SNP A -> G AC=1;AN=158;BQB=0.460695;DP=2309;DP4=1025,1206,7,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000418327;MQSB=0.941761;RPB=0.895848;SGB=27.3346;VDB=0.652385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1151-S.SNP.12:2619517 chr12:002619517 0 W/2619517-2619517 FN1151-S Single Base Substitution A-G INTERGENIC HET SNo: 1007, Mutant_ID: FN1151-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN-256.SNP.12:2622542 chr12:002622542 0 W/2622542-2622542 FN-256 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g05690 expressed protein SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2618-S.SNP.12:2626129 chr12:002626129 0 W/2626129-2626129 FN2618-S SNP T -> C AC=1;AN=198;BQB=0.966156;DP=4474;DP4=2238,2035,26,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.28316e-20;MQSB=0.9053;RPB=0.993327;SGB=115.647;VDB=0.0733971;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.12:2634506 chr12:002634506 0 W/2634506-2634506 FN2731-S SNP G -> C AC=1;AN=200;BQB=0.961552;DP=4487;DP4=2165,1997,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20043e-07;MQSB=0.89548;RPB=0.984902;SGB=68.0801;VDB=0.35515;EFF=INTERGENIC(MODIFIER||||||||||1) FN1074-S.SNP.12:2636983 chr12:002636983 0 W/2636983-2636983 FN1074-S Single Base Substitution G-T INTERGENIC HET SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN1219-S.SNP.12:2638311 chr12:002638311 0 W/2638311-2638311 FN1219-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2333.SNP.12:2639277 chr12:002639277 0 W/2639277-2639277 FN2333 SNP A -> C AC=1;AN=192;BQB=0.880199;DP=4770;DP4=2123,2330,19,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.40882e-14;MQSB=0.658287;RPB=0.536454;SGB=-8.56084;VDB=0.293016;EFF=INTERGENIC(MODIFIER||||||||||1) FN4176-S.SNP.12:2641092 chr12:002641092 0 W/2641092-2641092 FN4176-S SNP G -> A AC=1;AN=170;BQB=0.957265;DP=2230;DP4=1188,991,7,2;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.97836e-05;MQSB=0.961303;RPB=0.671814;SGB=34.5445;VDB=0.107081;EFF=INTERGENIC(MODIFIER||||||||||1) FN2361.SNP.12:2656819 chr12:002656819 0 W/2656819-2656819 FN2361 SNP T -> C AC=1;AN=192;BQB=0.982553;DP=5167;DP4=2131,2666,20,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.80902e-19;MQSB=0.90636;RPB=0.794059;SGB=33.9487;VDB=0.873364;EFF=INTERGENIC(MODIFIER||||||||||1) FN1372-S.SNP.12:2657405 chr12:002657405 0 W/2657405-2657405 FN1372-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2498.SNP.12:2666454 chr12:002666454 0 W/2666454-2666454 FN2498 SNP G -> A AC=2;AN=200;BQB=0.999943;DP=3852;DP4=1921,1633,14,12;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.16187e-14;MQSB=0.997515;RPB=0.854388;SGB=114.132;VDB=0.611711;EFF=UTR_5_PRIME(MODIFIER||264||333|LOC_Os12g05780|protein_coding|CODING|LOC_Os12g05780.2|1|1) FN4144-S.SNP.12:2670918 chr12:002670918 0 W/2670918-2670918 FN4144-S SNP G -> A AC=1;AN=170;BQB=0.967842;DP=2249;DP4=897,1290,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000287554;MQSB=0.998317;RPB=0.466557;SGB=30.1021;VDB=0.538025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.12:2675333 chr12:002675333 0 W/2675333-2675333 FN3591-S SNP T -> C AC=1;AN=188;BQB=0.998744;DP=3207;DP4=1344,1767,13,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000935454;MQB=1.00998e-10;MQSB=0.402362;RPB=0.783774;SGB=60.7873;VDB=0.0862379;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.12:2680001 chr12:002680001 0 W/2680001-2680001 FN3902-S SNP G -> A AC=2;AN=158;BQB=0.71763;DP=2347;DP4=1151,1104,13,14;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.00213038;MQB=1.28232e-12;MQSB=0.0501766;RPB=0.977291;SGB=49.8826;VDB=0.352055;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R160H|316|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R160H|293|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.2|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R160H|290|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.3|5|1) FN3902-S.SNP.12:2680002 chr12:002680002 0 W/2680002-2680002 FN3902-S SNP T -> A AC=2;AN=158;BQB=0.70777;DP=2331;DP4=1150,979,13,13;HOB=0.024996;ICB=0.493752;MQ=46;MQ0F=0.002145;MQB=1.15102e-11;MQSB=0.0168146;RPB=0.988171;SGB=108.239;VDB=0.241866;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R160|316|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.1|5|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R160|293|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.2|5|1),SYNONYMOUS_CODING(LOW|SILENT|cgT/cgA|R160|290|LOC_Os12g05810|protein_coding|CODING|LOC_Os12g05810.3|5|1) FN318-S.SNP.12:2682141 chr12:002682141 0 W/2682141-2682141 FN318-S Single Base Substitution A-T INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN-341.SNP.12:2683413 chr12:002683413 0 W/2683413-2683413 FN-341 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g05820 expressed protein SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2752-S.SNP.12:2684496 chr12:002684496 0 W/2684496-2684496 FN2752-S SNP C -> T AC=1;AN=200;BQB=0.933644;DP=5004;DP4=2099,2646,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56086e-08;MQSB=0.886922;RPB=0.884534;SGB=26.8797;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.12:2687099 chr12:002687099 0 W/2687099-2687099 FN687-S Single Base Substitution T-C INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-170.SNP.12:2689143 chr12:002689143 0 W/2689143-2689143 FN-170 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g05840 Cupin domain containing protein, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.12:2689144 chr12:002689144 0 W/2689144-2689144 FN-170 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.12:2689145 chr12:002689145 0 W/2689145-2689145 FN-170 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g05840 Cupin domain containing protein, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN-170.SNP.12:2689272 chr12:002689272 0 W/2689272-2689272 FN-170 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g05840 Cupin domain containing protein, expressed SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN419-S.SNP.12:2693744 chr12:002693744 0 W/2693744-2693744 FN419-S Single Base Substitution A-G INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2411.SNP.12:2699832 chr12:002699832 0 W/2699832-2699832 FN2411 SNP C -> T AC=1;AN=200;BQB=0.850691;DP=4417;DP4=2148,2045,6,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.93456e-10;MQSB=0.515003;RPB=0.927704;SGB=6.27959;VDB=0.566554;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L47|195|LOC_Os12g05880|protein_coding|CODING|LOC_Os12g05880.1|1|1) FN1173-S.SNP.12:2703069 chr12:002703069 0 W/2703069-2703069 FN1173-S Single Base Substitution A-T INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1297-S.SNP.12:2703069 chr12:002703069 0 W/2703069-2703069 FN1297-S Single Base Substitution A-T INTERGENIC HET SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1720-S.SNP.12:2703069 chr12:002703069 0 W/2703069-2703069 FN1720-S SNP A -> T AC=1;AN=188;BQB=0.0323416;DP=3427;DP4=1812,1527,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.40368e-10;MQSB=0.995843;RPB=0.894161;SGB=-128.262;VDB=0.138413;EFF=INTERGENIC(MODIFIER||||||||||1) FN801-S.SNP.12:2704871 chr12:002704871 0 W/2704871-2704871 FN801-S Single Base Substitution G-A INTERGENIC HET SNo: 720, Mutant_ID: FN801-S, Generation: M2, Mutations: 61, Genes: 32, Seed availability: Yes. FN2621-S.SNP.12:2722649 chr12:002722649 0 W/2722649-2722649 FN2621-S SNP A -> T AC=1;AN=200;BQB=0.99973;DP=4970;DP4=2249,2466,27,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58205e-27;MQSB=0.960776;RPB=0.160171;SGB=99.8245;VDB=0.402224;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.12:2722651 chr12:002722651 0 W/2722651-2722651 FN2621-S SNP G -> T AC=1;AN=200;BQB=0.940224;DP=4960;DP4=2200,2504,27,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05857e-25;MQSB=0.975207;RPB=0.35;SGB=97.2193;VDB=0.667911;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.12:2723965 chr12:002723965 0 W/2723965-2723965 FN1497-S Single Base Substitution A-T INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN2444.SNP.12:2744689 chr12:002744689 0 W/2744689-2744689 FN2444 SNP A -> T AC=2;AN=200;BQB=0.972886;DP=4488;DP4=2076,1967,28,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.72654e-27;MQSB=0.94134;RPB=0.193575;SGB=-107.13;VDB=0.480284;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cAc|L132H|259|LOC_Os12g05960|protein_coding|CODING|LOC_Os12g05960.1|1|1) FN576-S.SNP.12:2745916 chr12:002745916 0 W/2745916-2745916 FN576-S Single Base Substitution G-A INTERGENIC HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN3791-S.SNP.12:2746203 chr12:002746203 0 W/2746203-2746203 FN3791-S SNP C -> T AC=2;AN=190;BQB=0.958625;DP=2698;DP4=1336,1262,11,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.09979e-10;MQSB=0.916122;RPB=0.69922;SGB=10.3266;VDB=0.0722543;EFF=INTERGENIC(MODIFIER||||||||||1) FN1467-S.SNP.12:2749946 chr12:002749946 0 W/2749946-2749946 FN1467-S Single Base Substitution G-T INTRON HET SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN-226.SNP.12:2751696 chr12:002751696 0 W/2751696-2751696 FN-226 Single Base Substitution G-T INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3985-S.SNP.12:2764550 chr12:002764550 0 W/2764550-2764550 FN3985-S SNP C -> A AC=1;AN=168;BQB=0.985172;DP=2750;DP4=1140,1459,18,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.76053e-16;MQSB=0.957632;RPB=0.119087;SGB=96.5026;VDB=0.0601169;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.12:2765833 chr12:002765833 0 W/2765833-2765833 FN1384-S Single Base Substitution C-T INTERGENIC HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN838-S.SNP.12:2766487 chr12:002766487 0 W/2766487-2766487 FN838-S Single Base Substitution T-C INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3598-S.SNP.12:2768958 chr12:002768958 0 W/2768958-2768958 FN3598-S SNP C -> G AC=2;AN=188;BQB=0.981917;DP=2920;DP4=1338,1508,17,15;HOB=0.0210502;ICB=0.494738;MQ=37;MQ0F=0.143151;MQB=0.0394847;MQSB=0;RPB=0.652809;SGB=139.845;VDB=0.423088;EFF=START_GAINED(LOW||||1764|LOC_Os12g06010|protein_coding|CODING|LOC_Os12g06010.1|3|1),UTR_5_PRIME(MODIFIER||1489||1764|LOC_Os12g06010|protein_coding|CODING|LOC_Os12g06010.1|3|1) FN1344-S.SNP.12:2776623 chr12:002776623 0 W/2776623-2776623 FN1344-S Single Base Substitution T-C INTRON HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3283-S.SNP.12:2777324 chr12:002777324 0 W/2777324-2777324 FN3283-S SNP G -> A AC=1;AN=184;BQB=0.828558;DP=3002;DP4=1374,1561,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25524e-07;MQSB=0.980345;RPB=0.99755;SGB=53.2642;VDB=0.5463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3563-S.SNP.12:2777324 chr12:002777324 0 W/2777324-2777324 FN3563-S SNP G -> A AC=2;AN=188;BQB=0.468115;DP=2882;DP4=1278,1505,22,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.32103e-21;MQSB=0.997976;RPB=0.983855;SGB=189.821;VDB=0.397443;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.12:2777324 chr12:002777324 0 W/2777324-2777324 FN928-S Single Base Substitution G-A INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. W598-2-1.SNP.12:2777324 chr12:002777324 0 W/2777324-2777324 W598-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN1029-S.SNP.12:2785822 chr12:002785822 0 W/2785822-2785822 FN1029-S Single Base Substitution C-T INTERGENIC HET SNo: 925, Mutant_ID: FN1029-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN3407-S.SNP.12:2786514 chr12:002786514 0 W/2786514-2786514 FN3407-S SNP T -> A AC=1;AN=184;BQB=0.873728;DP=2976;DP4=1402,1483,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.30354e-10;MQSB=0.912552;RPB=0.996581;SGB=66.8296;VDB=0.550465;EFF=INTERGENIC(MODIFIER||||||||||1) FN433-S.SNP.12:2787078 chr12:002787078 0 W/2787078-2787078 FN433-S Single Base Substitution A-G INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN859-S.SNP.12:2787580 chr12:002787580 0 W/2787580-2787580 FN859-S Single Base Substitution A-T INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3730-S.SNP.12:2788060 chr12:002788060 0 W/2788060-2788060 FN3730-S SNP T -> A AC=1;AN=190;BQB=0.713841;DP=2629;DP4=1257,1255,16,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67065e-13;MQSB=0.940673;RPB=0.155285;SGB=94.6341;VDB=0.426232;EFF=INTERGENIC(MODIFIER||||||||||1) FN1048-S.SNP.12:2789164 chr12:002789164 0 W/2789164-2789164 FN1048-S Single Base Substitution T-C INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3826-S.SNP.12:2790254 chr12:002790254 0 W/2790254-2790254 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.879516;DP=2760;DP4=1426,1249,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53902e-11;MQSB=0.967802;RPB=0.839698;SGB=31.3213;VDB=0.915896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.12:2790724 chr12:002790724 0 W/2790724-2790724 FN3529-S SNP A -> T AC=1;AN=188;BQB=0.969426;DP=2907;DP4=1549,1261,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.11703e-06;MQSB=0.86414;RPB=0.416118;SGB=39.8925;VDB=0.487917;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.12:2794381 chr12:002794381 0 W/2794381-2794381 FN2621-S SNP C -> T AC=1;AN=200;BQB=0.911613;DP=5584;DP4=2247,3015,26,21;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.058202;MQB=0.0052697;MQSB=3.83351e-33;RPB=0.626682;SGB=210.84;VDB=0.909141;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S1438|1556|LOC_Os12g06040|protein_coding|CODING|LOC_Os12g06040.1|12|1) FN2751-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN2751-S SNP C -> T AC=2;AN=200;BQB=0.58685;DP=4909;DP4=2416,2260,14,18;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.205337;MQB=0.051072;MQSB=0;RPB=0.38067;SGB=68.5625;VDB=0.322538;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L487|1556|LOC_Os12g06040|protein_coding|CODING|LOC_Os12g06040.1|3|1) FN3807-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN3807-S SNP C -> T AC=2;AN=190;BQB=0.90505;DP=2893;DP4=1414,1390,20,9;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.102662;MQB=0.161836;MQSB=4.9244e-15;RPB=0.543126;SGB=126.511;VDB=0.355916;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L487|1556|LOC_Os12g06040|protein_coding|CODING|LOC_Os12g06040.1|3|1) FN391-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN391-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN4032-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN4032-S SNP C -> T AC=2;AN=168;BQB=0.688084;DP=2819;DP4=1387,1314,20,18;HOB=0.0235261;ICB=0.494119;MQ=28;MQ0F=0.112451;MQB=0.2026;MQSB=4.31678e-12;RPB=0.060203;SGB=162.943;VDB=0.306141;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L487|1556|LOC_Os12g06040|protein_coding|CODING|LOC_Os12g06040.1|3|1) FN4271-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN4271-S SNP C -> T AC=2;AN=170;BQB=0.733372;DP=2556;DP4=1223,1274,9,14;HOB=0.0232526;ICB=0.494188;MQ=29;MQ0F=0.101721;MQB=0.806197;MQSB=3.77431e-19;RPB=0.893674;SGB=41.8678;VDB=0.909648;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L487|1556|LOC_Os12g06040|protein_coding|CODING|LOC_Os12g06040.1|3|1) FN735-S.SNP.12:2798497 chr12:002798497 0 W/2798497-2798497 FN735-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN4203-S.SNP.12:2809461 chr12:002809461 0 W/2809461-2809461 FN4203-S SNP T -> C AC=1;AN=170;BQB=0.693638;DP=2386;DP4=1143,1160,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.96759e-07;MQSB=0.903041;RPB=0.933839;SGB=22.3266;VDB=0.728756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3831-S.SNP.12:2810344 chr12:002810344 0 W/2810344-2810344 FN3831-S SNP A -> G AC=1;AN=190;BQB=0.988259;DP=2810;DP4=1480,1216,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.31935e-11;MQSB=0.915666;RPB=0.105816;SGB=85.5263;VDB=0.588626;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.12:2814574 chr12:002814574 0 W/2814574-2814574 FN-188 Single Base Substitution G-T INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN894-S.SNP.12:2818188 chr12:002818188 0 W/2818188-2818188 FN894-S Single Base Substitution C-G INTRON HET SNo: 800, Mutant_ID: FN894-S, Generation: M2, Mutations: 64, Genes: 23, Seed availability: Yes. FN558-S.SNP.12:2829322 chr12:002829322 0 W/2829322-2829322 FN558-S Single Base Substitution A-C INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN1537-S.SNP.12:2832304 chr12:002832304 0 W/2832304-2832304 FN1537-S Single Base Substitution A-T INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN433-S.SNP.12:2834848 chr12:002834848 0 W/2834848-2834848 FN433-S Single Base Substitution G-A INTERGENIC HET SNo: 432, Mutant_ID: FN433-S, Generation: M2, Mutations: 48, Genes: 43, Seed availability: Yes. FN2782-S.SNP.12:2838047 chr12:002838047 0 W/2838047-2838047 FN2782-S SNP G -> A AC=1;AN=198;BQB=0.522234;DP=4352;DP4=2415,1699,9,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000229779;MQB=9.9821e-12;MQSB=0.474032;RPB=0.273965;SGB=34.5346;VDB=0.618965;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.12:2844445 chr12:002844445 0 W/2844445-2844445 FN2192-S SNP C -> T AC=1;AN=190;BQB=0.0517401;DP=3471;DP4=1709,1448,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000864304;MQB=8.00969e-07;MQSB=0.998673;RPB=0.758848;SGB=33.8752;VDB=0.971657;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.12:2850170 chr12:002850170 0 W/2850170-2850170 FN3849-S SNP G -> A AC=1;AN=158;BQB=0.976137;DP=2394;DP4=1218,1105,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.95499e-08;MQSB=0.979349;RPB=0.695183;SGB=51.4366;VDB=0.832957;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.12:2854908 chr12:002854908 0 W/2854908-2854908 FN4123-S SNP G -> A AC=1;AN=182;BQB=0.585344;DP=2763;DP4=1169,1492,5,4;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000535284;MQSB=0.996088;RPB=0.610424;SGB=35.0899;VDB=0.536808;EFF=INTRON(MODIFIER||||425|LOC_Os12g06100|protein_coding|CODING|LOC_Os12g06100.2|3|1) FN3459-S.SNP.12:2858592 chr12:002858592 0 W/2858592-2858592 FN3459-S SNP C -> T AC=1;AN=184;BQB=0.519831;DP=3964;DP4=1309,2496,3,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.12338e-07;MQSB=0.345543;RPB=0.587409;SGB=23.2751;VDB=0.816693;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.12:2861439 chr12:002861439 0 W/2861439-2861439 FN1318-S Single Base Substitution A-C INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN351-S.SNP.12:2864030 chr12:002864030 0 W/2864030-2864030 FN351-S Single Base Substitution T-G INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN351-S.SNP.12:2864031 chr12:002864031 0 W/2864031-2864031 FN351-S Single Base Substitution G-T INTERGENIC HOMO SNo: 342, Mutant_ID: FN351-S, Generation: M2, Mutations: 58, Genes: 42, Seed availability: Yes. FN907-S.SNP.12:2870010 chr12:002870010 0 W/2870010-2870010 FN907-S Single Base Substitution T-G INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1273-S.SNP.12:2874431 chr12:002874431 0 W/2874431-2874431 FN1273-S Single Base Substitution G-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN1273-S.SNP.12:2874432 chr12:002874432 0 W/2874432-2874432 FN1273-S Single Base Substitution A-T INTERGENIC HET SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN539-S.SNP.12:2879968 chr12:002879968 0 W/2879968-2879968 FN539-S Single Base Substitution A-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. W246-5-1.SNP.12:2880214 chr12:002880214 0 W/2880214-2880214 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN449-S.SNP.12:2880586 chr12:002880586 0 W/2880586-2880586 FN449-S Single Base Substitution A-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN3432-S.SNP.12:2883131 chr12:002883131 0 W/2883131-2883131 FN3432-S SNP T -> G AC=1;AN=184;BQB=0.78943;DP=2338;DP4=1258,950,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.78201e-10;MQSB=0.985301;RPB=0.393298;SGB=5.28054;VDB=0.149787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.12:2891569 chr12:002891569 0 W/2891569-2891569 FN2181-S SNP T -> A AC=1;AN=190;BQB=0.917564;DP=4749;DP4=2288,2066,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.9724e-12;MQSB=0.0311;RPB=0.228343;SGB=-39.0012;VDB=0.477257;EFF=INTERGENIC(MODIFIER||||||||||1) FN-264.SNP.12:2898276 chr12:002898276 0 W/2898276-2898276 FN-264 Single Base Substitution T-A INTERGENIC HET SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN1116-S.SNP.12:2899330 chr12:002899330 0 W/2899330-2899330 FN1116-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g06150 DUF623 domain containing protein, expressed SNo: 988, Mutant_ID: FN1116-S, Generation: M2, Mutations: 77, Genes: 92, Seed availability: Yes. FN487-S.SNP.12:2902563 chr12:002902563 0 W/2902563-2902563 FN487-S Single Base Substitution A-G INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN3421-S.SNP.12:2909886 chr12:002909886 0 W/2909886-2909886 FN3421-S SNP A -> C AC=1;AN=184;BQB=0.999877;DP=2628;DP4=1344,1132,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.74425e-07;MQSB=0.899177;RPB=0.582841;SGB=48.7425;VDB=0.124235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2664-S.SNP.12:2913830 chr12:002913830 0 W/2913830-2913830 FN2664-S SNP T -> C AC=1;AN=200;BQB=0.721159;DP=4643;DP4=2080,2222,20,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.4061e-20;MQSB=0.992715;RPB=0.712641;SGB=-1.00683;VDB=0.49422;EFF=INTERGENIC(MODIFIER||||||||||1) FN2347.SNP.12:2916283 chr12:002916283 0 W/2916283-2916283 FN2347 SNP C -> T AC=1;AN=192;BQB=0.993389;DP=5770;DP4=2544,2787,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00017331;MQB=1.81771e-12;MQSB=0.685424;RPB=0.861632;SGB=-10.8182;VDB=0.628808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3493-S.SNP.12:2924389 chr12:002924389 0 W/2924389-2924389 FN3493-S SNP G -> A AC=1;AN=184;BQB=0.996847;DP=2626;DP4=1056,1422,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.19803e-07;MQSB=0.964615;RPB=0.684063;SGB=28.7043;VDB=0.281503;EFF=INTERGENIC(MODIFIER||||||||||1) FN944-S.SNP.12:2924420 chr12:002924420 0 W/2924420-2924420 FN944-S Single Base Substitution A-T INTERGENIC HOMO SNo: 850, Mutant_ID: FN944-S, Generation: M2, Mutations: 81, Genes: 150, Seed availability: Yes. FN588-S.SNP.12:2925034 chr12:002925034 0 W/2925034-2925034 FN588-S Single Base Substitution T-C INTERGENIC HET SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN3921-S.SNP.12:2929201 chr12:002929201 0 W/2929201-2929201 FN3921-S SNP G -> T AC=1;AN=158;BQB=0.918017;DP=2239;DP4=1027,1126,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.84903e-07;MQSB=0.837057;RPB=0.994337;SGB=23.9652;VDB=0.800627;EFF=INTRON(MODIFIER||||245|LOC_Os12g06180|protein_coding|CODING|LOC_Os12g06180.1|2|1) FN3921-S.SNP.12:2929206 chr12:002929206 0 W/2929206-2929206 FN3921-S SNP C -> T AC=1;AN=158;BQB=0.940392;DP=2250;DP4=1030,1122,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.9991e-07;MQSB=0.883394;RPB=0.949274;SGB=38.3284;VDB=0.878682;EFF=INTRON(MODIFIER||||245|LOC_Os12g06180|protein_coding|CODING|LOC_Os12g06180.1|2|1) FN3837-S.SNP.12:2930039 chr12:002930039 0 W/2930039-2930039 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.999469;DP=2371;DP4=1134,1151,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.90415e-08;MQSB=0.956426;RPB=0.993474;SGB=44.5415;VDB=0.682947;EFF=INTRON(MODIFIER||||245|LOC_Os12g06180|protein_coding|CODING|LOC_Os12g06180.1|2|1) FN3837-S.SNP.12:2930045 chr12:002930045 0 W/2930045-2930045 FN3837-S SNP T -> A AC=1;AN=190;BQB=0.918246;DP=2370;DP4=1144,1163,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.93222e-07;MQSB=0.906199;RPB=0.926185;SGB=32.5467;VDB=0.543455;EFF=INTRON(MODIFIER||||245|LOC_Os12g06180|protein_coding|CODING|LOC_Os12g06180.1|2|1) FN793-S.SNP.12:2941501 chr12:002941501 0 W/2941501-2941501 FN793-S Single Base Substitution T-A INTRON HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1520-S.SNP.12:2943371 chr12:002943371 0 W/2943371-2943371 FN1520-S Single Base Substitution A-G INTRON Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN_949-1.SNP.12:2943421 chr12:002943421 0 W/2943421-2943421 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN912-S.SNP.12:2949898 chr12:002949898 0 W/2949898-2949898 FN912-S Single Base Substitution C-T INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN2345.SNP.12:2958530 chr12:002958530 0 W/2958530-2958530 FN2345 SNP G -> A AC=2;AN=192;BQB=0.55946;DP=5124;DP4=2551,2295,45,23;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.09591e-33;MQSB=0.999294;RPB=0.994456;SGB=-57.9817;VDB=0.378467;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G621E|2259|LOC_Os12g06230|protein_coding|CODING|LOC_Os12g06230.1|9|1) FN-107.SNP.12:2960313 chr12:002960313 0 W/2960313-2960313 FN-107 Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. W313-1-1-1-1.SNP.12:2961895 chr12:002961895 0 W/2961895-2961895 W313-1-1-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN568-S.SNP.12:2968853 chr12:002968853 0 W/2968853-2968853 FN568-S Single Base Substitution T-C INTERGENIC HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1726-S.SNP.12:2976376 chr12:002976376 0 W/2976376-2976376 FN1726-S SNP C -> T AC=2;AN=188;BQB=0.658312;DP=3610;DP4=1988,1561,23,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.59769e-18;MQSB=0.934045;RPB=0.893446;SGB=-48.7822;VDB=0.687936;EFF=INTERGENIC(MODIFIER||||||||||1) FN3426-S.SNP.12:2978397 chr12:002978397 0 W/2978397-2978397 FN3426-S SNP T -> G AC=2;AN=184;BQB=0.86436;DP=2770;DP4=1222,1474,18,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.42651e-16;MQSB=0.993802;RPB=0.999944;SGB=56.0583;VDB=0.118868;EFF=INTERGENIC(MODIFIER||||||||||1) FN983-S.SNP.12:2981734 chr12:002981734 0 W/2981734-2981734 FN983-S Single Base Substitution T-A INTERGENIC HOMO SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN3762-S.SNP.12:2983152 chr12:002983152 0 W/2983152-2983152 FN3762-S SNP T -> C AC=1;AN=190;BQB=0.956053;DP=2886;DP4=1304,1518,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.0155925;MQB=1.98241e-05;MQSB=0.0614127;RPB=0.763744;SGB=21.8853;VDB=0.252915;EFF=INTRON(MODIFIER||||1244|LOC_Os12g06270|protein_coding|CODING|LOC_Os12g06270.1|17|1) FN-305.SNP.12:3001467 chr12:003001467 0 W/3001467-3001467 FN-305 Single Base Substitution G-T INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-132.SNP.12:3006092 chr12:003006092 0 W/3006092-3006092 FN-132 Single Base Substitution A-T INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2317.SNP.12:3006839 chr12:003006839 0 W/3006839-3006839 FN2317 SNP A -> T AC=1;AN=192;BQB=0.999997;DP=5253;DP4=2441,2416,8,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.87807e-09;MQSB=0.994896;RPB=0.359721;SGB=2.66176;VDB=0.59783;EFF=INTERGENIC(MODIFIER||||||||||1) FN391-S.SNP.12:3006927 chr12:003006927 0 W/3006927-3006927 FN391-S Single Base Substitution T-C INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN2280-S.SNP.12:3013561 chr12:003013561 0 W/3013561-3013561 FN2280-S SNP A -> C AC=2;AN=190;BQB=0.433924;DP=4357;DP4=1927,1700,27,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000229516;MQB=4.10331e-23;MQSB=0.972146;RPB=0.872204;SGB=-48.8159;VDB=0.320317;EFF=INTRON(MODIFIER||||281|LOC_Os12g06300|protein_coding|CODING|LOC_Os12g06300.1|1|1) FN1429-S.SNP.12:3020411 chr12:003020411 0 W/3020411-3020411 FN1429-S Single Base Substitution G-T INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN2401.SNP.12:3020691 chr12:003020691 0 W/3020691-3020691 FN2401 SNP T -> C AC=1;AN=200;BQB=0.950799;DP=4869;DP4=2065,2511,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.63572e-10;MQSB=0.992052;RPB=0.994627;SGB=43.8747;VDB=0.56733;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.12:3048964 chr12:003048964 0 W/3048964-3048964 FN1419-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN2675-S.SNP.12:3052596 chr12:003052596 0 W/3052596-3052596 FN2675-S SNP G -> A AC=1;AN=200;BQB=0.496834;DP=4825;DP4=2189,2326,19,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.97831e-16;MQSB=0.999984;RPB=0.976938;SGB=141.763;VDB=0.149835;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P270L|744|LOC_Os12g06370|protein_coding|CODING|LOC_Os12g06370.1|4|1) FN-162.SNP.12:3052894 chr12:003052894 0 W/3052894-3052894 FN-162 Single Base Substitution A-C INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2723-S.SNP.12:3054935 chr12:003054935 0 W/3054935-3054935 FN2723-S SNP C -> A AC=1;AN=200;BQB=0.998662;DP=5196;DP4=2434,2488,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.39486e-11;MQSB=0.761097;RPB=0.939119;SGB=61.9006;VDB=0.931106;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.12:3075928 chr12:003075928 0 W/3075928-3075928 FN4300-S SNP C -> T AC=2;AN=170;BQB=0.997636;DP=2226;DP4=948,1198,11,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.30755e-14;MQSB=0.988576;RPB=0.839325;SGB=92.2986;VDB=0.497426;EFF=INTERGENIC(MODIFIER||||||||||1) FN903-S.SNP.12:3078053 chr12:003078053 0 W/3078053-3078053 FN903-S Single Base Substitution T-A INTERGENIC HET SNo: 809, Mutant_ID: FN903-S, Generation: M2, Mutations: 58, Genes: 49, Seed availability: Yes. FN1212-S.SNP.12:3082450 chr12:003082450 0 W/3082450-3082450 FN1212-S Single Base Substitution G-A INTRON HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN2351.SNP.12:3091064 chr12:003091064 0 W/3091064-3091064 FN2351 SNP C -> T AC=2;AN=192;BQB=0.359786;DP=4983;DP4=2268,2411,24,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000200682;MQB=1.38754e-26;MQSB=0.937864;RPB=0.129842;SGB=103.28;VDB=0.468574;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D200N|604|LOC_Os12g06440|protein_coding|CODING|LOC_Os12g06440.1|1|1) FN1112-S.SNP.12:3097907 chr12:003097907 0 W/3097907-3097907 FN1112-S Single Base Substitution A-C INTERGENIC HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3296-S.SNP.12:3100781 chr12:003100781 0 W/3100781-3100781 FN3296-S SNP G -> A AC=1;AN=184;BQB=0.934193;DP=2974;DP4=1504,1371,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.0004245;MQSB=0.775165;RPB=0.732158;SGB=18.1394;VDB=0.989691;EFF=INTERGENIC(MODIFIER||||||||||1) FN1648-S.SNP.12:3102253 chr12:003102253 0 W/3102253-3102253 FN1648-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN_786-4-1.SNP.12:3103375 chr12:003103375 0 W/3103375-3103375 FN_786-4-1 Single Base Substitution G-A Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN2375.SNP.12:3110983 chr12:003110983 0 W/3110983-3110983 FN2375 SNP A -> G AC=2;AN=192;BQB=0.548486;DP=4783;DP4=2617,1764,18,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000209074;MQB=1.07379e-17;MQSB=0.961373;RPB=0.7603;SGB=29.2557;VDB=0.589416;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.12:3114478 chr12:003114478 0 W/3114478-3114478 FN3535-S SNP C -> T AC=2;AN=188;BQB=0.992544;DP=2743;DP4=1183,1477,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.04352e-14;MQSB=0.934048;RPB=0.961472;SGB=108.042;VDB=0.373817;EFF=INTERGENIC(MODIFIER||||||||||1) FN3764-S.SNP.12:3119121 chr12:003119121 0 W/3119121-3119121 FN3764-S SNP T -> C AC=2;AN=190;BQB=0.64804;DP=2874;DP4=1444,1309,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.1191e-13;MQSB=0.98897;RPB=0.498637;SGB=51.7524;VDB=0.975855;EFF=INTRON(MODIFIER||||728|LOC_Os12g06480|protein_coding|CODING|LOC_Os12g06480.1|6|1),INTRON(MODIFIER||||791|LOC_Os12g06480|protein_coding|CODING|LOC_Os12g06480.2|5|1) FN1268-S.SNP.12:3125877 chr12:003125877 0 W/3125877-3125877 FN1268-S Single Base Substitution G-A INTERGENIC HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3515-S.SNP.12:3128026 chr12:003128026 0 W/3128026-3128026 FN3515-S SNP G -> A AC=1;AN=188;BQB=0.707274;DP=2622;DP4=1277,1242,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.0216e-05;MQSB=0.989734;RPB=0.196383;SGB=25.3545;VDB=0.62888;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.12:3133510 chr12:003133510 0 W/3133510-3133510 FN942-S Single Base Substitution T-C INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN814-S.SNP.12:3134731 chr12:003134731 0 W/3134731-3134731 FN814-S Single Base Substitution A-G INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3910-S.SNP.12:3139580 chr12:003139580 0 W/3139580-3139580 FN3910-S SNP T -> A AC=2;AN=158;BQB=0.979678;DP=2912;DP4=1451,1356,8,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.05063e-10;MQSB=0.991656;RPB=0.311908;SGB=6.19449;VDB=0.026633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.12:3139581 chr12:003139581 0 W/3139581-3139581 FN3910-S SNP A -> T AC=2;AN=158;BQB=0.937887;DP=2901;DP4=1466,1352,7,6;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.74899e-09;MQSB=0.999744;RPB=0.200408;SGB=51.4366;VDB=0.011551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3910-S.SNP.12:3139582 chr12:003139582 0 W/3139582-3139582 FN3910-S SNP A -> T AC=2;AN=158;BQB=0.998298;DP=2902;DP4=1454,1354,7,7;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.61633e-09;MQSB=0.999731;RPB=0.194631;SGB=55.806;VDB=0.00685589;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.12:3140741 chr12:003140741 0 W/3140741-3140741 FN2751-S SNP T -> A AC=1;AN=200;BQB=0.438515;DP=5131;DP4=2516,2381,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.98906e-10;MQSB=0.967651;RPB=0.951323;SGB=-11.8999;VDB=0.584384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.12:3140886 chr12:003140886 0 W/3140886-3140886 FN4260-S SNP G -> T AC=1;AN=170;BQB=0.962314;DP=2479;DP4=1308,1063,15,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.03116e-16;MQSB=0.99354;RPB=0.0478144;SGB=118.955;VDB=0.234155;EFF=INTERGENIC(MODIFIER||||||||||1) FN1006-S.SNP.12:3144120 chr12:003144120 0 W/3144120-3144120 FN1006-S Single Base Substitution T-C INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN-231.SNP.12:3148499 chr12:003148499 0 W/3148499-3148499 FN-231 Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g06510 calcineurin B, putative, expressed SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. W246-5-1.SNP.12:3152475 chr12:003152475 0 W/3152475-3152475 W246-5-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN2140-S.SNP.12:3161144 chr12:003161144 0 W/3161144-3161144 FN2140-S SNP A -> C AC=2;AN=168;BQB=0.00766432;DP=4154;DP4=2092,1973,43,34;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.46892e-38;MQSB=0.713305;RPB=0.463726;SGB=28.5341;VDB=0.915263;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K366Q|1487|LOC_Os12g06530|protein_coding|CODING|LOC_Os12g06530.1|2|1) FN239-S.SNP.12:3167435 chr12:003167435 0 W/3167435-3167435 FN239-S Single Base Substitution T-C INTERGENIC HOMO SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2691-S.SNP.12:3167435 chr12:003167435 0 W/3167435-3167435 FN2691-S SNP T -> C AC=1;AN=200;BQB=0.0178418;DP=5215;DP4=2283,2753,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.14713e-10;MQSB=0.999238;RPB=0.228214;SGB=47.7211;VDB=0.89541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.12:3174284 chr12:003174284 0 W/3174284-3174284 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.922639;DP=3400;DP4=1467,1838,9,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.26469e-09;MQSB=0.907849;RPB=0.925534;SGB=75.8731;VDB=0.0728434;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.12:3178830 chr12:003178830 0 W/3178830-3178830 FN1255-S Single Base Substitution T-G INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3500-S.SNP.12:3179481 chr12:003179481 0 W/3179481-3179481 FN3500-S SNP C -> T AC=1;AN=188;BQB=0.750248;DP=2910;DP4=1330,1456,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.1742e-14;MQSB=0.959086;RPB=0.994116;SGB=14.798;VDB=0.475061;EFF=INTERGENIC(MODIFIER||||||||||1) FN-353.SNP.12:3183694 chr12:003183694 0 W/3183694-3183694 FN-353 Single Base Substitution C-T INTRON HET SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN2213-S.SNP.12:3188708 chr12:003188708 0 W/3188708-3188708 FN2213-S SNP C -> T AC=2;AN=190;BQB=0.99545;DP=5031;DP4=2251,2490,14,41;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.56603e-30;MQSB=0.99036;RPB=0.960422;SGB=125.815;VDB=0.93924;EFF=INTRON(MODIFIER||||629|LOC_Os12g06570|protein_coding|CODING|LOC_Os12g06570.1|2|1) FN2213-S.SNP.12:3188712 chr12:003188712 0 W/3188712-3188712 FN2213-S SNP G -> T AC=2;AN=190;BQB=0.590879;DP=5079;DP4=2213,2448,17,35;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.62715e-30;MQSB=0.915394;RPB=0.914698;SGB=174.702;VDB=0.966934;EFF=INTRON(MODIFIER||||629|LOC_Os12g06570|protein_coding|CODING|LOC_Os12g06570.1|2|1) FN4037-S.SNP.12:3193163 chr12:003193163 0 W/3193163-3193163 FN4037-S SNP G -> T AC=1;AN=168;BQB=0.947949;DP=3168;DP4=1419,1599,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.0107323;MQB=0.343448;MQSB=0.369046;RPB=0.894296;SGB=34.4498;VDB=0.880537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G190V|503|LOC_Os12g06580|protein_coding|CODING|LOC_Os12g06580.1|2|1) FN1319-S.SNP.12:3200681 chr12:003200681 0 W/3200681-3200681 FN1319-S Single Base Substitution A-G INTERGENIC HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN542-S.SNP.12:3206569 chr12:003206569 0 W/3206569-3206569 FN542-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN1193-S.SNP.12:3218827 chr12:003218827 0 W/3218827-3218827 FN1193-S Single Base Substitution C-T INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN3426-S.SNP.12:3222682 chr12:003222682 0 W/3222682-3222682 FN3426-S SNP A -> C AC=2;AN=184;BQB=0.993903;DP=2524;DP4=1383,960,14,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.69822e-13;MQSB=0.0841324;RPB=0.92843;SGB=85.0529;VDB=0.710911;EFF=INTRON(MODIFIER||||432|LOC_Os12g06640|protein_coding|CODING|LOC_Os12g06640.1|1|1),INTRON(MODIFIER||||432|LOC_Os12g06640|protein_coding|CODING|LOC_Os12g06640.2|1|1) FN3538-S.SNP.12:3225262 chr12:003225262 0 W/3225262-3225262 FN3538-S SNP A -> G AC=1;AN=188;BQB=0.966834;DP=2975;DP4=1388,1517,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.58657e-05;MQSB=0.976757;RPB=0.698613;SGB=18.2682;VDB=0.811382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.12:3228639 chr12:003228639 0 W/3228639-3228639 FN1097-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g06650 tetratricopeptide-like helical, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1097-S.SNP.12:3228640 chr12:003228640 0 W/3228640-3228640 FN1097-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g06650 tetratricopeptide-like helical, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2562-S.SNP.12:3243332 chr12:003243332 0 W/3243332-3243332 FN2562-S SNP C -> G AC=1;AN=198;BQB=0.497895;DP=3287;DP4=1636,1419,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.78081e-09;MQSB=0.111166;RPB=0.958483;SGB=77.1196;VDB=0.433205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Cgt|G44R|533|LOC_Os12g06670|protein_coding|CODING|LOC_Os12g06670.1|1|1) FN2312.SNP.12:3244478 chr12:003244478 0 W/3244478-3244478 FN2312 SNP G -> A AC=1;AN=192;BQB=0.554964;DP=5154;DP4=2225,2342,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.16482e-12;MQSB=0.993608;RPB=0.99846;SGB=-187.044;VDB=0.709719;EFF=INTERGENIC(MODIFIER||||||||||1) FN2167-S.SNP.12:3246684 chr12:003246684 0 W/3246684-3246684 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.445747;DP=4195;DP4=2030,2129,13,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.56693e-13;MQSB=0.999991;RPB=0.245126;SGB=18.4989;VDB=0.665082;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.12:3252200 chr12:003252200 0 W/3252200-3252200 FN-273 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN3871-S.SNP.12:3252388 chr12:003252388 0 W/3252388-3252388 FN3871-S SNP C -> T AC=2;AN=158;BQB=0.915218;DP=2540;DP4=1266,1159,10,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.31266e-13;MQSB=0.761287;RPB=0.686042;SGB=14.4112;VDB=0.688692;EFF=INTRON(MODIFIER||||1179|LOC_Os12g06680|protein_coding|CODING|LOC_Os12g06680.1|8|1) FN4279-S.SNP.12:3253539 chr12:003253539 0 W/3253539-3253539 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.867299;DP=2489;DP4=1312,1092,17,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.29652e-16;MQSB=0.999627;RPB=0.945391;SGB=96.8457;VDB=0.871977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S302F|1179|LOC_Os12g06680|protein_coding|CODING|LOC_Os12g06680.1|6|1) FN2480.SNP.12:3255893 chr12:003255893 0 W/3255893-3255893 FN2480 SNP G -> A AC=1;AN=200;BQB=0.280318;DP=4960;DP4=2404,2257,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57446e-11;MQSB=0.539582;RPB=0.206608;SGB=77.2904;VDB=0.318302;EFF=INTRON(MODIFIER||||1179|LOC_Os12g06680|protein_coding|CODING|LOC_Os12g06680.1|1|1) FN2317.SNP.12:3256840 chr12:003256840 0 W/3256840-3256840 FN2317 SNP T -> G AC=1;AN=192;BQB=0.91958;DP=4969;DP4=2346,2275,4,4;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.8155e-05;MQSB=0.787968;RPB=0.662369;SGB=5.83518;VDB=0.333755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.12:3258440 chr12:003258440 0 W/3258440-3258440 FN2185-S SNP A -> G AC=1;AN=190;BQB=0.30093;DP=4280;DP4=1878,1793,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37224e-11;MQSB=0.861339;RPB=0.987949;SGB=44.0907;VDB=0.269877;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E292|766|LOC_Os12g06690|protein_coding|CODING|LOC_Os12g06690.1|3|1) FN3528-S.SNP.12:3259984 chr12:003259984 0 W/3259984-3259984 FN3528-S SNP G -> A AC=1;AN=188;BQB=0.576306;DP=3899;DP4=1778,2045,15,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.18471e-13;MQSB=0.999361;RPB=0.469101;SGB=117.128;VDB=0.33765;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C644Y|766|LOC_Os12g06690|protein_coding|CODING|LOC_Os12g06690.1|5|1) FN4117-S.SNP.12:3264488 chr12:003264488 0 W/3264488-3264488 FN4117-S SNP T -> C AC=1;AN=182;BQB=0.700359;DP=3697;DP4=1905,1664,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.08806e-11;MQSB=0.757994;RPB=0.309479;SGB=75.6874;VDB=0.470042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3503-S.SNP.12:3265532 chr12:003265532 0 W/3265532-3265532 FN3503-S SNP C -> T AC=1;AN=188;BQB=0.984849;DP=3412;DP4=1738,1617,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12708e-08;MQSB=0.865631;RPB=0.522598;SGB=43.0708;VDB=0.736613;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L687|856|LOC_Os12g06710|protein_coding|CODING|LOC_Os12g06710.1|4|1) FN918-S.SNP.12:3268539 chr12:003268539 0 W/3268539-3268539 FN918-S Single Base Substitution G-T INTERGENIC HOMO SNo: 824, Mutant_ID: FN918-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3345-S.SNP.12:3269686 chr12:003269686 0 W/3269686-3269686 FN3345-S SNP C -> T AC=1;AN=184;BQB=0.943984;DP=3843;DP4=1812,1933,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.36158e-08;MQSB=0.937287;RPB=0.732331;SGB=53.2642;VDB=0.719481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Acc|A352T|663|LOC_Os12g06720|protein_coding|CODING|LOC_Os12g06720.1|3|1) FN2600-S.SNP.12:3270478 chr12:003270478 0 W/3270478-3270478 FN2600-S SNP G -> A AC=1;AN=198;BQB=0.930572;DP=3791;DP4=1866,1698,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.67944e-07;MQSB=0.813771;RPB=0.459144;SGB=54.144;VDB=0.0879863;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T149|663|LOC_Os12g06720|protein_coding|CODING|LOC_Os12g06720.1|2|1) FN772-S.SNP.12:3281741 chr12:003281741 0 W/3281741-3281741 FN772-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g06740 OsFBX440 - F-box domain containing protein, expressed SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2231-S.SNP.12:3283881 chr12:003283881 0 W/3283881-3283881 FN2231-S SNP A -> G AC=1;AN=190;BQB=0.739088;DP=4887;DP4=2309,2319,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.63315e-08;MQSB=0.336813;RPB=0.904798;SGB=23.6597;VDB=0.051161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.12:3287187 chr12:003287187 0 W/3287187-3287187 FN1476-S Single Base Substitution G-C INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-265.SNP.12:3288666 chr12:003288666 0 W/3288666-3288666 FN-265 Single Base Substitution C-T INTERGENIC HOMO SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN1467-S.SNP.12:3292235 chr12:003292235 0 W/3292235-3292235 FN1467-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1531-S.SNP.12:3295040 chr12:003295040 0 W/3295040-3295040 FN1531-S Single Base Substitution T-C INTERGENIC Homo SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2308.SNP.12:3295135 chr12:003295135 0 W/3295135-3295135 FN2308 SNP T -> A AC=1;AN=192;BQB=0.0772933;DP=4881;DP4=2215,2442,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.04245e-09;MQSB=0.948906;RPB=0.749874;SGB=61.1661;VDB=0.358503;EFF=INTERGENIC(MODIFIER||||||||||1) FN1053-S.SNP.12:3299270 chr12:003299270 0 W/3299270-3299270 FN1053-S Single Base Substitution A-T INTRON HET SNo: 945, Mutant_ID: FN1053-S, Generation: M2, Mutations: 71, Genes: 208, Seed availability: Yes. FN1046-S.SNP.12:3323532 chr12:003323532 0 W/3323532-3323532 FN1046-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g06840 ATEXO70C2, putative, expressed SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN1046-S.SNP.12:3323534 chr12:003323534 0 W/3323534-3323534 FN1046-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g06840 ATEXO70C2, putative, expressed SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3829-S.SNP.12:3332370 chr12:003332370 0 W/3332370-3332370 FN3829-S SNP C -> G AC=2;AN=190;BQB=0.734863;DP=2098;DP4=589,1395,7,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.52673e-14;MQSB=0.00769347;RPB=0.842244;SGB=108.296;VDB=0.782814;EFF=INTERGENIC(MODIFIER||||||||||1) FN1173-S.SNP.12:3334968 chr12:003334968 0 W/3334968-3334968 FN1173-S Single Base Substitution C-T INTERGENIC HET SNo: 1016, Mutant_ID: FN1173-S, Generation: M2, Mutations: 66, Genes: 20, Seed availability: Yes. FN1046-S.SNP.12:3335484 chr12:003335484 0 W/3335484-3335484 FN1046-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g06860 retrotransposon protein, putative, unclassified, expressed SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN838-S.SNP.12:3337177 chr12:003337177 0 W/3337177-3337177 FN838-S Single Base Substitution C-T INTERGENIC HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN-384.SNP.12:3354296 chr12:003354296 0 W/3354296-3354296 FN-384 Single Base Substitution T-A INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN476-S.SNP.12:3358168 chr12:003358168 0 W/3358168-3358168 FN476-S Single Base Substitution A-T INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN2752-S.SNP.12:3358586 chr12:003358586 0 W/3358586-3358586 FN2752-S SNP G -> T AC=1;AN=200;BQB=0.933234;DP=4554;DP4=2378,1869,10,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.59973e-07;MQSB=0.912631;RPB=0.985643;SGB=19.0642;VDB=0.0921838;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H96N|237|LOC_Os12g06900|protein_coding|CODING|LOC_Os12g06900.1|1|1) FN-222.SNP.12:3371955 chr12:003371955 0 W/3371955-3371955 FN-222 Single Base Substitution C-T INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN4203-S.SNP.12:3374150 chr12:003374150 0 W/3374150-3374150 FN4203-S SNP G -> T AC=1;AN=170;BQB=0.3345;DP=2251;DP4=1104,1074,10,9;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=1.21064e-06;MQSB=0.923902;RPB=0.812155;SGB=32.0972;VDB=0.578619;EFF=INTERGENIC(MODIFIER||||||||||1) FN577-S.SNP.12:3377769 chr12:003377769 0 W/3377769-3377769 FN577-S Single Base Substitution T-C INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN-275.SNP.12:3384062 chr12:003384062 0 W/3384062-3384062 FN-275 Single Base Substitution G-A INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2281.SNP.12:3384873 chr12:003384873 0 W/3384873-3384873 FN2281 SNP C -> T AC=1;AN=192;BQB=0.872985;DP=4616;DP4=2124,2221,11,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.5408e-10;MQSB=0.142629;RPB=0.999121;SGB=71.8591;VDB=0.442431;EFF=INTERGENIC(MODIFIER||||||||||1) FN792-S.SNP.12:3387662 chr12:003387662 0 W/3387662-3387662 FN792-S Single Base Substitution T-C INTERGENIC HET SNo: 712, Mutant_ID: FN792-S, Generation: M2, Mutations: 44, Genes: 10, Seed availability: Yes. FN2411.SNP.12:3390656 chr12:003390656 0 W/3390656-3390656 FN2411 SNP T -> C AC=1;AN=200;BQB=0.992055;DP=4559;DP4=2132,2013,8,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00131608;MQB=0.000464745;MQSB=1.80373e-10;RPB=0.994455;SGB=21.6694;VDB=0.443029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.12:3391491 chr12:003391491 0 W/3391491-3391491 FN2403 SNP G -> A AC=1;AN=200;BQB=0.00451734;DP=7554;DP4=2914,4007,12,15;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.072412;MQB=0.0446085;MQSB=2.8026e-45;RPB=0.562903;SGB=55.5366;VDB=0.506;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q3*|118|LOC_Os12g06940|protein_coding|CODING|LOC_Os12g06940.1|1|1);LOF=(LOC_Os12g06940|LOC_Os12g06940|1|1.00);NMD=(LOC_Os12g06940|LOC_Os12g06940|1|1.00) FN1415-S.SNP.12:3397249 chr12:003397249 0 W/3397249-3397249 FN1415-S Single Base Substitution T-C INTRON HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3437-S.SNP.12:3400031 chr12:003400031 0 W/3400031-3400031 FN3437-S SNP T -> A AC=1;AN=184;BQB=0.571679;DP=2688;DP4=1185,1430,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000642495;MQSB=0.990817;RPB=0.895509;SGB=35.1773;VDB=0.675141;EFF=INTERGENIC(MODIFIER||||||||||1) FN4050-S.SNP.12:3410660 chr12:003410660 0 W/3410660-3410660 FN4050-S SNP C -> A AC=1;AN=168;BQB=0.992745;DP=2376;DP4=1141,1137,5,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.64461e-07;MQSB=0.999998;RPB=0.88749;SGB=34.748;VDB=0.78715;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G1001V|2445|LOC_Os12g06980|protein_coding|CODING|LOC_Os12g06980.1|2|1) FN2535-S.SNP.12:3411286 chr12:003411286 0 W/3411286-3411286 FN2535-S SNP A -> C AC=1;AN=198;BQB=0.823432;DP=4255;DP4=1965,2040,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.03087e-17;MQSB=0.983494;RPB=0.877313;SGB=132.261;VDB=0.216398;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgT/tgG|C792W|2445|LOC_Os12g06980|protein_coding|CODING|LOC_Os12g06980.1|2|1) FN1266-S.SNP.12:3416331 chr12:003416331 0 W/3416331-3416331 FN1266-S Single Base Substitution T-A INTERGENIC HET SNo: 1081, Mutant_ID: FN1266-S, Generation: M2, Mutations: 54, Genes: 157, Seed availability: Yes. FN-197.SNP.12:3418204 chr12:003418204 0 W/3418204-3418204 FN-197 Single Base Substitution C-G INTERGENIC HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN-348.SNP.12:3418560 chr12:003418560 0 W/3418560-3418560 FN-348 Single Base Substitution G-T INTERGENIC HOMO SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN806-S.SNP.12:3419504 chr12:003419504 0 W/3419504-3419504 FN806-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g06990 expressed protein SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN1240-S.SNP.12:3425106 chr12:003425106 0 W/3425106-3425106 FN1240-S Single Base Substitution C-T INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN2750-S.SNP.12:3437933 chr12:003437933 0 W/3437933-3437933 FN2750-S SNP G -> A AC=1;AN=200;BQB=0.155924;DP=4748;DP4=2209,2231,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.57072e-05;MQSB=0.252286;RPB=0.950563;SGB=29.4541;VDB=0.209865;EFF=UTR_3_PRIME(MODIFIER||172||250|LOC_Os12g07030|protein_coding|CODING|LOC_Os12g07030.1|2|1) FN2553-S.SNP.12:3443454 chr12:003443454 0 W/3443454-3443454 FN2553-S SNP T -> G AC=1;AN=198;BQB=0.999673;DP=4336;DP4=2165,1866,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.06365e-09;MQSB=0.951908;RPB=0.389935;SGB=43.7442;VDB=0.0425283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2573-S.SNP.12:3446158 chr12:003446158 0 W/3446158-3446158 FN2573-S SNP G -> T AC=1;AN=198;BQB=0.812646;DP=3819;DP4=1831,1751,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.42761e-08;MQSB=0.989957;RPB=0.96708;SGB=16.3688;VDB=0.153225;EFF=INTERGENIC(MODIFIER||||||||||1) FN4241-S.SNP.12:3459851 chr12:003459851 0 W/3459851-3459851 FN4241-S SNP G -> T AC=2;AN=170;BQB=0.995003;DP=2450;DP4=1251,1090,22,19;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.28053e-24;MQSB=0.999124;RPB=0.235412;SGB=131.272;VDB=0.4108;EFF=SPLICE_SITE_REGION(LOW||||419|LOC_Os12g07060|protein_coding|CODING|LOC_Os12g07060.1|9|1),INTRON(MODIFIER||||419|LOC_Os12g07060|protein_coding|CODING|LOC_Os12g07060.1|9|1) FN1401-S.SNP.12:3463855 chr12:003463855 0 W/3463855-3463855 FN1401-S Single Base Substitution G-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2146-S.SNP.12:3466766 chr12:003466766 0 W/3466766-3466766 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.0180059;DP=3167;DP4=1518,1597,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44233e-08;MQSB=0.902421;RPB=0.979997;SGB=12.7756;VDB=0.934078;EFF=INTRON(MODIFIER||||56|LOC_Os12g07070|protein_coding|CODING|LOC_Os12g07070.1|2|1) FN890-S.SNP.12:3467635 chr12:003467635 0 W/3467635-3467635 FN890-S Single Base Substitution T-C INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN2265-S.SNP.12:3470554 chr12:003470554 0 W/3470554-3470554 FN2265-S SNP A -> G AC=1;AN=190;BQB=0.975202;DP=4895;DP4=2386,2126,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.28917e-10;MQSB=0.923124;RPB=0.133722;SGB=8.77275;VDB=0.295676;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D114G|475|LOC_Os12g07080|protein_coding|CODING|LOC_Os12g07080.1|1|1) FN2725-S.SNP.12:3472955 chr12:003472955 0 W/3472955-3472955 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.993903;DP=4538;DP4=2405,1876,2,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40629e-05;MQSB=0.955227;RPB=0.479742;SGB=31.2392;VDB=0.459606;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.12:3475695 chr12:003475695 0 W/3475695-3475695 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.953703;DP=2379;DP4=1223,1084,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.59161e-06;MQSB=0.999895;RPB=0.995763;SGB=34.5445;VDB=0.429958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3939-S.SNP.12:3477469 chr12:003477469 0 W/3477469-3477469 FN3939-S SNP G -> C AC=1;AN=158;BQB=0.508814;DP=2589;DP4=1118,1361,4,18;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.62991e-11;MQSB=0.894673;RPB=0.978322;SGB=-14.6908;VDB=0.937771;EFF=INTERGENIC(MODIFIER||||||||||1) FN1763-S.SNP.12:3478755 chr12:003478755 0 W/3478755-3478755 FN1763-S SNP G -> T AC=1;AN=188;BQB=0.419119;DP=2911;DP4=1577,1295,9,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.49322e-08;MQSB=0.99994;RPB=0.304881;SGB=-66.2726;VDB=0.95749;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.12:3478755 chr12:003478755 0 W/3478755-3478755 FN3528-S SNP G -> T AC=1;AN=188;BQB=0.845613;DP=2778;DP4=1303,1408,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.00014e-07;MQSB=0.998865;RPB=0.988812;SGB=62.6088;VDB=0.953432;EFF=INTERGENIC(MODIFIER||||||||||1) FN3863-S.SNP.12:3478755 chr12:003478755 0 W/3478755-3478755 FN3863-S SNP G -> T AC=2;AN=158;BQB=0.969277;DP=2389;DP4=1092,1212,10,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.46732e-12;MQSB=0.999992;RPB=0.138368;SGB=67.7679;VDB=0.131618;EFF=INTERGENIC(MODIFIER||||||||||1) FN4164-S.SNP.12:3478755 chr12:003478755 0 W/3478755-3478755 FN4164-S SNP G -> T AC=1;AN=170;BQB=0.598409;DP=2438;DP4=1142,1241,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.09895e-06;MQSB=0.990129;RPB=0.358018;SGB=61.2001;VDB=0.259502;EFF=INTERGENIC(MODIFIER||||||||||1) FN2082-S.SNP.12:3482270 chr12:003482270 0 W/3482270-3482270 FN2082-S SNP G -> A AC=2;AN=168;BQB=0.969402;DP=1548;DP4=713,753,20,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.0648e-14;MQSB=0.805413;RPB=0.500542;SGB=90.9633;VDB=0.11691;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R75|549|LOC_Os12g07100|protein_coding|CODING|LOC_Os12g07100.1|1|1) FN2688-S.SNP.12:3486022 chr12:003486022 0 W/3486022-3486022 FN2688-S SNP A -> C AC=1;AN=200;BQB=0.997062;DP=4918;DP4=2404,2229,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75601e-07;MQSB=0.999553;RPB=0.712435;SGB=36.6644;VDB=0.719481;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||698|LOC_Os12g07110|protein_coding|CODING|LOC_Os12g07110.1|3|1),SPLICE_SITE_ACCEPTOR(HIGH||||698|LOC_Os12g07110|protein_coding|CODING|LOC_Os12g07110.2|2|1),INTRON(MODIFIER||||698|LOC_Os12g07110|protein_coding|CODING|LOC_Os12g07110.1|2|1),INTRON(MODIFIER||||698|LOC_Os12g07110|protein_coding|CODING|LOC_Os12g07110.2|1|1);LOF=(LOC_Os12g07110|LOC_Os12g07110|2|1.00) FN1460-S.SNP.12:3489740 chr12:003489740 0 W/3489740-3489740 FN1460-S Single Base Substitution C-A INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN-64.SNP.12:3491323 chr12:003491323 0 W/3491323-3491323 FN-64 Single Base Substitution G-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN679-S.SNP.12:3494949 chr12:003494949 0 W/3494949-3494949 FN679-S Single Base Substitution T-C INTERGENIC HET SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN565-S.SNP.12:3499017 chr12:003499017 0 W/3499017-3499017 FN565-S Single Base Substitution G-T INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. W313-1-1-1-1.SNP.12:3503665 chr12:003503665 0 W/3503665-3503665 W313-1-1-1-1 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN707-S.SNP.12:3523474 chr12:003523474 0 W/3523474-3523474 FN707-S Single Base Substitution A-C SYNONYMOUS_CODING HOMO SNo: 636, Mutant_ID: FN707-S, Generation: M2, Mutations: 60, Genes: 31, Seed availability: Yes. FN1304-S.SNP.12:3538914 chr12:003538914 0 W/3538914-3538914 FN1304-S Single Base Substitution C-T INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2661-S.SNP.12:3540968 chr12:003540968 0 W/3540968-3540968 FN2661-S SNP T -> C AC=2;AN=200;BQB=0.568018;DP=5109;DP4=2621,2222,29,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.00429e-27;MQSB=0.956816;RPB=0.714414;SGB=170.056;VDB=0.617138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2226-S.SNP.12:3541638 chr12:003541638 0 W/3541638-3541638 FN2226-S SNP T -> A AC=2;AN=190;BQB=0.999941;DP=5001;DP4=2287,2372,21,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.01193e-22;MQSB=0.670615;RPB=0.393834;SGB=142.717;VDB=0.953181;EFF=INTERGENIC(MODIFIER||||||||||1) FN3967-S.SNP.12:3545171 chr12:003545171 0 W/3545171-3545171 FN3967-S SNP G -> T AC=2;AN=182;BQB=0.955563;DP=2824;DP4=1474,1206,17,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.69684e-19;MQSB=0.994813;RPB=0.934786;SGB=109.356;VDB=0.192316;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.12:3545200 chr12:003545200 0 W/3545200-3545200 FN2455 SNP T -> C AC=1;AN=200;BQB=0.626847;DP=5249;DP4=2567,2275,18,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47806e-15;MQSB=0.977452;RPB=0.138856;SGB=-114.438;VDB=0.73071;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.12:3550342 chr12:003550342 0 W/3550342-3550342 FN3477-S SNP C -> A AC=2;AN=184;BQB=0.974531;DP=2683;DP4=1301,1285,20,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.85714e-18;MQSB=0.989929;RPB=0.920105;SGB=143.7;VDB=0.520358;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Aat|H75N|273|LOC_Os12g07220|protein_coding|CODING|LOC_Os12g07220.1|2|1) FN579-S.SNP.12:3550366 chr12:003550366 0 W/3550366-3550366 FN579-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g07220 bacterial transferase hexapeptide domain containing protein, expressed SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN-288.SNP.12:3552594 chr12:003552594 0 W/3552594-3552594 FN-288 Single Base Substitution T-A UTR_3_PRIME HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN678-S.SNP.12:3560091 chr12:003560091 0 W/3560091-3560091 FN678-S Single Base Substitution G-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN2125-S.SNP.12:3563649 chr12:003563649 0 W/3563649-3563649 FN2125-S SNP A -> G AC=1;AN=168;BQB=0.734481;DP=1627;DP4=352,1260,1,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34938e-05;MQSB=0.961988;RPB=0.604502;SGB=24.4556;VDB=0.204246;EFF=INTRON(MODIFIER||||111|LOC_Os12g07240|protein_coding|CODING|LOC_Os12g07240.1|1|1) FN1210-S.SNP.12:3572152 chr12:003572152 0 W/3572152-3572152 FN1210-S Single Base Substitution G-A INTERGENIC HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN3368-S.SNP.12:3589482 chr12:003589482 0 W/3589482-3589482 FN3368-S SNP A -> T AC=1;AN=184;BQB=0.334416;DP=2986;DP4=1588,1272,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82269e-05;MQSB=0.91686;RPB=0.838449;SGB=3.75875;VDB=0.516194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3852-S.SNP.12:3591411 chr12:003591411 0 W/3591411-3591411 FN3852-S SNP T -> C AC=1;AN=158;BQB=0.93821;DP=2339;DP4=1256,1028,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.2677e-08;MQSB=0.69752;RPB=0.985536;SGB=37.4429;VDB=0.0258873;EFF=UTR_5_PRIME(MODIFIER||27||659|LOC_Os12g07300|protein_coding|CODING|LOC_Os12g07300.1|1|1),UTR_5_PRIME(MODIFIER||27||595|LOC_Os12g07300|protein_coding|CODING|LOC_Os12g07300.2|1|1) FN1711-S.SNP.12:3594599 chr12:003594599 0 W/3594599-3594599 FN1711-S SNP T -> C AC=2;AN=188;BQB=0.0262229;DP=4099;DP4=2042,1994,21,26;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.52197e-21;MQSB=0.967578;RPB=0.958843;SGB=-49.6956;VDB=0.44791;EFF=INTRON(MODIFIER||||659|LOC_Os12g07300|protein_coding|CODING|LOC_Os12g07300.1|9|1),INTRON(MODIFIER||||595|LOC_Os12g07300|protein_coding|CODING|LOC_Os12g07300.2|9|1) FN584-S.SNP.12:3600205 chr12:003600205 0 W/3600205-3600205 FN584-S Single Base Substitution A-T INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN774-S.SNP.12:3602616 chr12:003602616 0 W/3602616-3602616 FN774-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2611-S.SNP.12:3603154 chr12:003603154 0 W/3603154-3603154 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.312198;DP=4906;DP4=2601,2097,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.98639e-19;MQSB=0.920136;RPB=0.980281;SGB=71.1676;VDB=0.507543;EFF=INTRON(MODIFIER||||210|LOC_Os12g07310|protein_coding|CODING|LOC_Os12g07310.1|1|1) FN3509-S.SNP.12:3606835 chr12:003606835 0 W/3606835-3606835 FN3509-S SNP C -> T AC=2;AN=188;BQB=0.986447;DP=2613;DP4=1318,1208,9,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.86488e-10;MQSB=0.982616;RPB=0.112404;SGB=76.2387;VDB=0.203165;EFF=INTERGENIC(MODIFIER||||||||||1) FN1622-S.SNP.12:3609418 chr12:003609418 0 W/3609418-3609418 FN1622-S Single Base Substitution C-T INTERGENIC HET SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN2134-S.SNP.12:3614274 chr12:003614274 0 W/3614274-3614274 FN2134-S SNP A -> G AC=2;AN=168;BQB=0.891015;DP=3488;DP4=1834,1562,45,33;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=5.49186e-30;MQSB=0.908432;RPB=0.688979;SGB=204.498;VDB=0.93347;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.12:3627976 chr12:003627976 0 W/3627976-3627976 FN3652-S SNP A -> G AC=1;AN=190;BQB=0.997085;DP=2998;DP4=1295,1575,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.80299e-08;MQSB=0.986538;RPB=0.95073;SGB=39.6545;VDB=0.746499;EFF=UTR_3_PRIME(MODIFIER||2167||267|LOC_Os12g07370|protein_coding|CODING|LOC_Os12g07370.1|4|1) FN2378.SNP.12:3631186 chr12:003631186 0 W/3631186-3631186 FN2378 SNP G -> A AC=2;AN=192;BQB=0.538574;DP=5007;DP4=2326,2397,44,36;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.56436e-38;MQSB=0.994443;RPB=0.417573;SGB=175.815;VDB=0.460204;EFF=INTRON(MODIFIER||||267|LOC_Os12g07370|protein_coding|CODING|LOC_Os12g07370.1|2|1) 705-6.SNP.12:3631364 chr12:003631364 0 W/3631364-3631364 705-6 Single Base Substitution A-T INTRON Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN4080-S.SNP.12:3631806 chr12:003631806 0 W/3631806-3631806 FN4080-S SNP A -> T AC=1;AN=182;BQB=0.983552;DP=2787;DP4=1113,1548,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.08167e-05;MQSB=0.891469;RPB=0.947736;SGB=35.0899;VDB=0.0491808;EFF=INTRON(MODIFIER||||267|LOC_Os12g07370|protein_coding|CODING|LOC_Os12g07370.1|1|1) FN1704-S.SNP.12:3637628 chr12:003637628 0 W/3637628-3637628 FN1704-S SNP A -> T AC=1;AN=188;BQB=0.318897;DP=3793;DP4=2099,1646,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.11287e-11;MQSB=0.989446;RPB=0.499025;SGB=33.7061;VDB=0.940286;EFF=INTERGENIC(MODIFIER||||||||||1) FN807-S.SNP.12:3638361 chr12:003638361 0 W/3638361-3638361 FN807-S Single Base Substitution G-A INTERGENIC HET SNo: 725, Mutant_ID: FN807-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN627-S.SNP.12:3639665 chr12:003639665 0 W/3639665-3639665 FN627-S Single Base Substitution T-A INTERGENIC HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN4072-S.SNP.12:3641647 chr12:003641647 0 W/3641647-3641647 FN4072-S SNP C -> A AC=1;AN=182;BQB=0.988543;DP=2765;DP4=1502,1197,6,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.10036e-06;MQSB=0.992995;RPB=0.719779;SGB=35.0899;VDB=0.497855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2165-S.SNP.12:3649274 chr12:003649274 0 W/3649274-3649274 FN2165-S SNP T -> C AC=1;AN=168;BQB=0.0871889;DP=3984;DP4=1612,2305,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000238039;MQSB=0.0902289;RPB=0.896748;SGB=19.7539;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN3297-S.SNP.12:3651690 chr12:003651690 0 W/3651690-3651690 FN3297-S SNP G -> T AC=1;AN=184;BQB=0.977311;DP=2403;DP4=991,1314,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00325626;MQSB=0.359702;RPB=0.987797;SGB=30.6558;VDB=0.594311;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.12:3654214 chr12:003654214 0 W/3654214-3654214 FN_949-1 Single Base Substitution C-G HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN2751-S.SNP.12:3660762 chr12:003660762 0 W/3660762-3660762 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.931679;DP=4478;DP4=2323,1857,7,2;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0;MQB=9.26656e-05;MQSB=6.73665e-05;RPB=0.421363;SGB=22.2439;VDB=0.709501;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.12:3668482 chr12:003668482 0 W/3668482-3668482 FN1197-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3413-S.SNP.12:3683515 chr12:003683515 0 W/3683515-3683515 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.996624;DP=2805;DP4=1178,1538,4,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.45923e-09;MQSB=0.960215;RPB=0.378581;SGB=75.8731;VDB=0.848684;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R5|159|LOC_Os12g07460|protein_coding|CODING|LOC_Os12g07460.1|1|1) FN-222.SNP.12:3689731 chr12:003689731 0 W/3689731-3689731 FN-222 Single Base Substitution A-T INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN982-S.SNP.12:3697022 chr12:003697022 0 W/3697022-3697022 FN982-S Single Base Substitution A-T INTRON HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN1655-S.SNP.12:3698090 chr12:003698090 0 W/3698090-3698090 FN1655-S Single Base Substitution T-G INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN1039-S.SNP.12:3702279 chr12:003702279 0 W/3702279-3702279 FN1039-S Single Base Substitution A-T INTERGENIC HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN-252.SNP.12:3704140 chr12:003704140 0 W/3704140-3704140 FN-252 Single Base Substitution A-G INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN-95.SNP.12:3708475 chr12:003708475 0 W/3708475-3708475 FN-95 Single Base Substitution C-A INTERGENIC HET SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN3362-S.SNP.12:3710919 chr12:003710919 0 W/3710919-3710919 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.864553;DP=2864;DP4=1417,1356,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.41793e-07;MQSB=0.595808;RPB=0.813896;SGB=44.2207;VDB=0.534701;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R390C|418|LOC_Os12g07480|protein_coding|CODING|LOC_Os12g07480.1|1|1) FN3384-S.SNP.12:3716454 chr12:003716454 0 W/3716454-3716454 FN3384-S SNP G -> T AC=1;AN=184;BQB=0.969996;DP=2983;DP4=1367,1520,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.98911e-07;MQSB=0.987173;RPB=0.271143;SGB=35.7479;VDB=0.256906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.12:3726138 chr12:003726138 0 W/3726138-3726138 FN2183-S SNP G -> A AC=1;AN=190;BQB=0.999982;DP=4438;DP4=2095,2040,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.00459e-17;MQSB=0.688887;RPB=0.840566;SGB=110.732;VDB=0.741689;EFF=INTRON(MODIFIER||||366|LOC_Os12g07500|protein_coding|CODING|LOC_Os12g07500.1|1|1) FN4073-S.SNP.12:3726785 chr12:003726785 0 W/3726785-3726785 FN4073-S SNP T -> A AC=1;AN=182;BQB=0.995276;DP=3205;DP4=1214,1884,5,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.2161e-08;MQSB=0.982349;RPB=0.716212;SGB=35.6277;VDB=0.534909;EFF=UTR_5_PRIME(MODIFIER||32||366|LOC_Os12g07500|protein_coding|CODING|LOC_Os12g07500.1|1|1) FN2297.SNP.12:3738519 chr12:003738519 0 W/3738519-3738519 FN2297 SNP T -> A AC=1;AN=192;BQB=0.967138;DP=5382;DP4=2585,2571,9,12;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000185805;MQB=3.28604e-10;MQSB=0.987022;RPB=0.858899;SGB=-11.9469;VDB=0.037757;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.12:3738521 chr12:003738521 0 W/3738521-3738521 FN2297 SNP C -> T AC=1;AN=192;BQB=0.992696;DP=5367;DP4=2547,2556,10,9;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000186324;MQB=1.2967e-10;MQSB=0.946687;RPB=0.577818;SGB=34.0426;VDB=0.251757;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.12:3739095 chr12:003739095 0 W/3739095-3739095 FN2139-S SNP C -> A AC=1;AN=168;BQB=0.860227;DP=3492;DP4=1885,1559,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02924e-13;MQSB=0.656192;RPB=0.979451;SGB=69.0561;VDB=0.730251;EFF=INTERGENIC(MODIFIER||||||||||1) FN1665-S.SNP.12:3739101 chr12:003739101 0 W/3739101-3739101 FN1665-S Single Base Substitution G-C INTERGENIC Homo SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN-100.SNP.12:3751589 chr12:003751589 0 W/3751589-3751589 FN-100 Single Base Substitution C-T INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. FN-134.SNP.12:3751589 chr12:003751589 0 W/3751589-3751589 FN-134 Single Base Substitution C-T INTERGENIC HET SNo: 134, Mutant_ID: FN-134, Generation: M2, Mutations: 23, Genes: 9, Seed availability: Yes. FN2142-S.SNP.12:3751589 chr12:003751589 0 W/3751589-3751589 FN2142-S SNP C -> T AC=2;AN=168;BQB=0.265134;DP=3631;DP4=1810,1680,19,22;HOB=0.0235261;ICB=0.494119;MQ=46;MQ0F=0;MQB=7.78375e-06;MQSB=9.09106e-12;RPB=0.392092;SGB=-5.46373;VDB=0.209371;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.12:3756811 chr12:003756811 0 W/3756811-3756811 FN955-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g07540 growth regulator related protein, putative, expressed SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN2657-S.SNP.12:3759274 chr12:003759274 0 W/3759274-3759274 FN2657-S SNP A -> G AC=1;AN=200;BQB=0.682474;DP=4568;DP4=1986,2385,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.07909e-08;MQSB=0.976438;RPB=0.583544;SGB=4.67442;VDB=0.994287;EFF=INTERGENIC(MODIFIER||||||||||1) FN593-S.SNP.12:3760738 chr12:003760738 0 W/3760738-3760738 FN593-S Single Base Substitution C-T INTERGENIC HET SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN3419-S.SNP.12:3767365 chr12:003767365 0 W/3767365-3767365 FN3419-S SNP T -> C AC=2;AN=184;BQB=0.845496;DP=2667;DP4=1096,1493,8,16;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=7.00373e-09;MQSB=0.924822;RPB=0.90912;SGB=103.004;VDB=0.921799;EFF=INTERGENIC(MODIFIER||||||||||1) FN514-S.SNP.12:3771042 chr12:003771042 0 W/3771042-3771042 FN514-S Single Base Substitution T-G INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3515-S.SNP.12:3775690 chr12:003775690 0 W/3775690-3775690 FN3515-S SNP A -> G AC=1;AN=188;BQB=0.935822;DP=2995;DP4=1461,1473,1,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.22783e-07;MQSB=0.995097;RPB=0.725634;SGB=32.441;VDB=0.118129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2470.SNP.12:3785333 chr12:003785333 0 W/3785333-3785333 FN2470 SNP T -> G AC=2;AN=200;BQB=0.68644;DP=5037;DP4=2089,2539,23,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000198531;MQB=1.11052e-21;MQSB=0.946258;RPB=0.960624;SGB=192.42;VDB=0.926862;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.12:3788225 chr12:003788225 0 W/3788225-3788225 FN3501-S SNP G -> A AC=2;AN=188;BQB=0.882356;DP=2948;DP4=1125,1683,2,8;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=0.000210306;MQSB=0.328675;RPB=0.831354;SGB=39.8925;VDB=0.067156;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.12:3789211 chr12:003789211 0 W/3789211-3789211 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.99837;DP=2410;DP4=1215,1113,14,11;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0;MQB=1.21948e-13;MQSB=0.967615;RPB=0.991747;SGB=107.526;VDB=0.200804;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.12:3790376 chr12:003790376 0 W/3790376-3790376 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3366-S.SNP.12:3802884 chr12:003802884 0 W/3802884-3802884 FN3366-S SNP A -> G AC=1;AN=184;BQB=0.938694;DP=2909;DP4=1219,1614,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.84556e-11;MQSB=0.999518;RPB=0.525425;SGB=33.3622;VDB=0.886291;EFF=INTERGENIC(MODIFIER||||||||||1) FN1080-S.SNP.12:3824476 chr12:003824476 0 W/3824476-3824476 FN1080-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 965, Mutant_ID: FN1080-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN3376-S.SNP.12:3826918 chr12:003826918 0 W/3826918-3826918 FN3376-S SNP C -> A AC=1;AN=184;BQB=0.964492;DP=3288;DP4=1649,1504,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000304136;MQB=2.02338e-09;MQSB=0.886472;RPB=0.441729;SGB=63.9222;VDB=0.435408;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.12:3832439 chr12:003832439 0 W/3832439-3832439 FN3793-S SNP G -> T AC=1;AN=190;BQB=0.91959;DP=2098;DP4=947,1046,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0757865;MQB=0.0307187;MQSB=0.595016;RPB=0.964146;SGB=10.8904;VDB=0.851509;EFF=INTRON(MODIFIER||||1242|LOC_Os12g07630|protein_coding|CODING|LOC_Os12g07630.1|1|1) FN2397.SNP.12:3838270 chr12:003838270 0 W/3838270-3838270 FN2397 SNP C -> T AC=1;AN=200;BQB=0.769809;DP=5130;DP4=2708,2089,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.37134e-19;MQSB=0.701014;RPB=0.425333;SGB=71.1676;VDB=0.692076;EFF=INTERGENIC(MODIFIER||||||||||1) FN2606-S.SNP.12:3852438 chr12:003852438 0 W/3852438-3852438 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.491897;DP=4344;DP4=2124,1999,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.37016e-06;MQSB=0.978108;RPB=0.57474;SGB=-5.00654;VDB=0.48031;EFF=INTRON(MODIFIER||||285|LOC_Os12g07650|protein_coding|CODING|LOC_Os12g07650.1|1|1) FN1074-S.SNP.12:3856161 chr12:003856161 0 W/3856161-3856161 FN1074-S Single Base Substitution T-C INTRON HET SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN-344.SNP.12:3858893 chr12:003858893 0 W/3858893-3858893 FN-344 Single Base Substitution A-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN1409-S.SNP.12:3864335 chr12:003864335 0 W/3864335-3864335 FN1409-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN1257-S.SNP.12:3864679 chr12:003864679 0 W/3864679-3864679 FN1257-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1257-S.SNP.12:3864680 chr12:003864680 0 W/3864680-3864680 FN1257-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1232-S.SNP.12:3866263 chr12:003866263 0 W/3866263-3866263 FN1232-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN1446-S.SNP.12:3873675 chr12:003873675 0 W/3873675-3873675 FN1446-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN2407.SNP.12:3879043 chr12:003879043 0 W/3879043-3879043 FN2407 SNP G -> A AC=1;AN=200;BQB=0.998389;DP=4451;DP4=1652,2258,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.80357e-07;MQSB=0.378439;RPB=0.5405;SGB=19.0642;VDB=0.166362;EFF=INTERGENIC(MODIFIER||||||||||1) FN1514-S.SNP.12:3881073 chr12:003881073 0 W/3881073-3881073 FN1514-S Single Base Substitution G-A INTRON Homo SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3971-S.SNP.12:3891925 chr12:003891925 0 W/3891925-3891925 FN3971-S SNP T -> A AC=2;AN=168;BQB=0.204411;DP=2911;DP4=1536,1230,9,8;HOB=0.0235261;ICB=0.494119;MQ=22;MQ0F=0.281347;MQB=0.407032;MQSB=0;RPB=0.271768;SGB=48.4712;VDB=0.349668;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.12:3897057 chr12:003897057 0 W/3897057-3897057 FN3626-S SNP A -> C AC=1;AN=190;BQB=0.88756;DP=3034;DP4=1472,1449,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.243243;MQB=0.981868;MQSB=1.26406e-11;RPB=0.981714;SGB=53.6492;VDB=0.610232;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gCg|E1148A|1556|LOC_Os12g07750|protein_coding|CODING|LOC_Os12g07750.1|1|1) FN1685-S.SNP.12:3902740 chr12:003902740 0 W/3902740-3902740 FN1685-S SNP G -> A AC=1;AN=188;BQB=0.0661245;DP=3496;DP4=1932,1481,19,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.09731e-08;MQSB=0.989184;RPB=0.848642;SGB=-202.367;VDB=0.307496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2083-S.SNP.12:3902785 chr12:003902785 0 W/3902785-3902785 FN2083-S SNP A -> T AC=1;AN=168;BQB=0.863994;DP=3747;DP4=1905,1732,62,42;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0;MQSB=0.981659;RPB=0.38491;SGB=-2629.93;VDB=0.99996;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.12:3903607 chr12:003903607 0 W/3903607-3903607 FN2492 SNP C -> T AC=1;AN=200;BQB=0.00864017;DP=4801;DP4=2567,1967,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.79003e-07;MQSB=0.993868;RPB=0.0181368;SGB=3.06925;VDB=0.011779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3366-S.SNP.12:3908904 chr12:003908904 0 W/3908904-3908904 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.282173;DP=3880;DP4=2414,1292,25,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.54275e-12;MQSB=0.75241;RPB=0.703723;SGB=68.6673;VDB=0.522349;EFF=INTERGENIC(MODIFIER||||||||||1) FN3575-S.SNP.12:3913687 chr12:003913687 0 W/3913687-3913687 FN3575-S SNP G -> A AC=1;AN=188;BQB=0.863571;DP=2835;DP4=1234,1519,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.28519e-10;MQSB=0.959112;RPB=0.613403;SGB=53.7007;VDB=0.234292;EFF=INTERGENIC(MODIFIER||||||||||1) FN3301-S.SNP.12:3920057 chr12:003920057 0 W/3920057-3920057 FN3301-S SNP G -> A AC=1;AN=184;BQB=0.576479;DP=2913;DP4=1483,1302,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.74084e-06;MQSB=0.998668;RPB=0.962701;SGB=42.7914;VDB=0.739723;EFF=INTRON(MODIFIER||||522|LOC_Os12g07770|protein_coding|CODING|LOC_Os12g07770.1|3|1) FN3518-S.SNP.12:3923537 chr12:003923537 0 W/3923537-3923537 FN3518-S SNP C -> T AC=2;AN=188;BQB=0.708779;DP=2732;DP4=1383,1281,12,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.38455e-13;MQSB=0.972957;RPB=0.143174;SGB=112.585;VDB=0.171478;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.12:3927016 chr12:003927016 0 W/3927016-3927016 FN2681-S SNP A -> T AC=1;AN=200;BQB=0.633498;DP=4846;DP4=2343,2307,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3528e-08;MQSB=0.992441;RPB=0.259037;SGB=54.2646;VDB=0.661916;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.12:3932656 chr12:003932656 0 W/3932656-3932656 FN2658-S SNP G -> T AC=1;AN=200;BQB=0.885562;DP=4699;DP4=2667,1687,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21886e-11;MQSB=0.265699;RPB=0.485672;SGB=72.7161;VDB=0.427278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G4V|451|LOC_Os12g07780|protein_coding|CODING|LOC_Os12g07780.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G4V|421|LOC_Os12g07780|protein_coding|CODING|LOC_Os12g07780.2|1|1) FN1651-S.SNP.12:3944508 chr12:003944508 0 W/3944508-3944508 FN1651-S Single Base Substitution G-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN-296.SNP.12:3946803 chr12:003946803 0 W/3946803-3946803 FN-296 Single Base Substitution C-A INTERGENIC HOMO SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN2260-S.SNP.12:3947667 chr12:003947667 0 W/3947667-3947667 FN2260-S SNP C -> G AC=1;AN=190;BQB=0.655647;DP=4980;DP4=2509,2079,25,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000200803;MQB=1.39843e-17;MQSB=0.965761;RPB=0.9677;SGB=79.845;VDB=0.0334712;EFF=INTRON(MODIFIER||||484|LOC_Os12g07810|protein_coding|CODING|LOC_Os12g07810.1|1|1) FN1106-S.SNP.12:3948953 chr12:003948953 0 W/3948953-3948953 FN1106-S Single Base Substitution A-T INTRON HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1702-S.SNP.12:3956908 chr12:003956908 0 W/3956908-3956908 FN1702-S SNP G -> T AC=1;AN=188;BQB=0.127542;DP=3792;DP4=2072,1693,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.83166e-08;MQSB=0.92933;RPB=0.393168;SGB=-13.3699;VDB=0.496476;EFF=INTRON(MODIFIER||||309|LOC_Os12g07820|protein_coding|CODING|LOC_Os12g07820.1|7|1) FN838-S.SNP.12:3977659 chr12:003977659 0 W/3977659-3977659 FN838-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN-309.SNP.12:3979020 chr12:003979020 0 W/3979020-3979020 FN-309 Single Base Substitution A-G INTERGENIC HOMO SNo: 304, Mutant_ID: FN-309, Generation: M2, Mutations: 54, Genes: 25, Seed availability: Yes. FN1204-S.SNP.12:3986361 chr12:003986361 0 W/3986361-3986361 FN1204-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN1135-S.SNP.12:3993644 chr12:003993644 0 W/3993644-3993644 FN1135-S Single Base Substitution C-T INTRON HET SNo: 1002, Mutant_ID: FN1135-S, Generation: M2, Mutations: 70, Genes: 109, Seed availability: Yes. FN1535-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN1535-S Single Base Substitution A-G INTERGENIC Homo SNo: 1285, Mutant_ID: FN1535-S, Generation: M2, Mutations: 76, Genes: 12, Seed availability: Yes. FN1735-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN1735-S SNP A -> G AC=2;AN=188;BQB=0.558625;DP=4060;DP4=1809,2192,18,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.72364e-25;MQSB=0.999845;RPB=0.754958;SGB=1.84238;VDB=0.32764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2190-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN2190-S SNP A -> G AC=2;AN=190;BQB=0.621267;DP=5049;DP4=2251,2529,34,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000198059;MQB=1.34339e-34;MQSB=0.998046;RPB=0.978419;SGB=159.015;VDB=0.855837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN2689-S SNP A -> G AC=2;AN=200;BQB=0.83143;DP=5117;DP4=2408,2511,20,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.55568e-24;MQSB=0.983525;RPB=0.665037;SGB=197.025;VDB=0.944889;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN3887-S SNP A -> G AC=2;AN=158;BQB=0.784731;DP=2505;DP4=1115,1315,22,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=5.96663e-17;MQSB=0.998524;RPB=0.88768;SGB=104.832;VDB=0.716291;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN4110-S SNP A -> G AC=2;AN=182;BQB=0.905078;DP=2695;DP4=1299,1316,11,23;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.10261e-18;MQSB=0.85952;RPB=0.637925;SGB=147.861;VDB=0.79374;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 FN962-S Single Base Substitution A-G INTERGENIC HOMO SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. W360-2S-2.SNP.12:3995526 chr12:003995526 0 W/3995526-3995526 W360-2S-2 Single Base Substitution A-G INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2657-S.SNP.12:3995635 chr12:003995635 0 W/3995635-3995635 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.995936;DP=5024;DP4=2403,2351,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.44206e-11;MQSB=0.984105;RPB=0.981562;SGB=58.2954;VDB=0.439046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2566-S.SNP.12:3999999 chr12:003999999 0 W/3999999-3999999 FN2566-S SNP A -> G AC=1;AN=186;BQB=0.0343543;DP=4189;DP4=1851,2156,9,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.27137e-11;MQSB=0.945051;RPB=0.58681;SGB=58.1246;VDB=0.27002;EFF=INTERGENIC(MODIFIER||||||||||1) FN813-S.SNP.12:4007031 chr12:004007031 0 W/4007031-4007031 FN813-S Single Base Substitution C-T INTRON HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1757-S.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN1757-S SNP C -> T AC=1;AN=188;BQB=0.60383;DP=1415;DP4=541,821,5,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.05748e-07;MQSB=0.0224117;RPB=0.809432;SGB=43.0708;VDB=0.284864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN2122-S SNP C -> T AC=1;AN=168;BQB=0.755811;DP=1872;DP4=702,1107,3,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000395793;MQSB=0.0985722;RPB=0.811905;SGB=14.8923;VDB=0.868582;EFF=INTERGENIC(MODIFIER||||||||||1) FN2237-S.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN2237-S SNP C -> T AC=2;AN=190;BQB=0.991341;DP=3561;DP4=1389,1608,21,11;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=1.95308e-08;MQSB=0.0189454;RPB=0.995115;SGB=103.624;VDB=0.17111;EFF=INTERGENIC(MODIFIER||||||||||1) FN2334.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN2334 SNP C -> T AC=1;AN=192;BQB=0.53644;DP=4398;DP4=1760,2043,11,3;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.00100645;MQSB=0.082647;RPB=0.979968;SGB=39.78;VDB=0.723817;EFF=INTERGENIC(MODIFIER||||||||||1) FN727-S.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN727-S Single Base Substitution C-T INTERGENIC HET SNo: 652, Mutant_ID: FN727-S, Generation: M2, Mutations: 62, Genes: 127, Seed availability: Yes. FN867-S.SNP.12:4011765 chr12:004011765 0 W/4011765-4011765 FN867-S Single Base Substitution C-T INTERGENIC HET SNo: 773, Mutant_ID: FN867-S, Generation: M2, Mutations: 57, Genes: 18, Seed availability: Yes. FN442-S.SNP.12:4028920 chr12:004028920 0 W/4028920-4028920 FN442-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g07940 expressed protein SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN511-S.SNP.12:4034589 chr12:004034589 0 W/4034589-4034589 FN511-S Single Base Substitution A-T INTRON HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN1036-S.SNP.12:4043245 chr12:004043245 0 W/4043245-4043245 FN1036-S Single Base Substitution A-G INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN3787-S.SNP.12:4043401 chr12:004043401 0 W/4043401-4043401 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.346095;DP=2594;DP4=1301,1179,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000682218;MQSB=0.938531;RPB=0.594151;SGB=35.4339;VDB=0.351304;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A30T|139|LOC_Os12g07960|protein_coding|CODING|LOC_Os12g07960.1|1|1) FN2407.SNP.12:4063143 chr12:004063143 0 W/4063143-4063143 FN2407 SNP C -> T AC=1;AN=200;BQB=0.743363;DP=4746;DP4=2274,2075,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210704;MQB=4.12944e-11;MQSB=0.337019;RPB=0.367353;SGB=61.9006;VDB=0.147204;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q379*|919|LOC_Os12g08000|protein_coding|CODING|LOC_Os12g08000.1|9|1);LOF=(LOC_Os12g08000|LOC_Os12g08000|1|1.00);NMD=(LOC_Os12g08000|LOC_Os12g08000|1|1.00) FN3667-S.SNP.12:4066622 chr12:004066622 0 W/4066622-4066622 FN3667-S SNP T -> C AC=1;AN=190;BQB=0.997784;DP=2935;DP4=1394,1445,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.67704e-08;MQSB=0.94347;RPB=0.993303;SGB=62.7569;VDB=0.243516;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F647S|919|LOC_Os12g08000|protein_coding|CODING|LOC_Os12g08000.1|16|1) FN1493-S.SNP.12:4077022 chr12:004077022 0 W/4077022-4077022 FN1493-S Single Base Substitution A-T INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN3862-S.SNP.12:4084316 chr12:004084316 0 W/4084316-4084316 FN3862-S SNP T -> A AC=2;AN=158;BQB=0.822833;DP=2338;DP4=1144,1116,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.43303e-12;MQSB=0.963241;RPB=0.954071;SGB=71.1374;VDB=0.566267;EFF=INTRON(MODIFIER||||385|LOC_Os12g08030|protein_coding|CODING|LOC_Os12g08030.1|6|1) FN2450.SNP.12:4087939 chr12:004087939 0 W/4087939-4087939 FN2450 SNP G -> A AC=1;AN=200;BQB=0.956831;DP=3620;DP4=1771,1566,8,5;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000828729;MQB=0.153913;MQSB=1.93562e-12;RPB=0.863457;SGB=19.0642;VDB=0.222179;EFF=INTERGENIC(MODIFIER||||||||||1) W721-2-1.SNP.12:4089125 chr12:004089125 0 W/4089125-4089125 W721-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN2269-S.SNP.12:4091595 chr12:004091595 0 W/4091595-4091595 FN2269-S SNP G -> T AC=2;AN=190;BQB=0.237033;DP=5311;DP4=2279,2592,20,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.70896e-26;MQSB=0.199622;RPB=0.945906;SGB=174.702;VDB=0.105909;EFF=INTERGENIC(MODIFIER||||||||||1) FN1115-S.SNP.12:4099526 chr12:004099526 0 W/4099526-4099526 FN1115-S Single Base Substitution T-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3890-S.SNP.12:4112210 chr12:004112210 0 W/4112210-4112210 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.718312;DP=2697;DP4=1255,1297,25,32;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00333704;MQB=9.50829e-15;MQSB=0.489785;RPB=0.21754;SGB=238.335;VDB=0.0662902;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R532K|941|LOC_Os12g08080|protein_coding|CODING|LOC_Os12g08080.1|2|1) FN1516-S.SNP.12:4115463 chr12:004115463 0 W/4115463-4115463 FN1516-S Single Base Substitution G-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN-192.SNP.12:4116906 chr12:004116906 0 W/4116906-4116906 FN-192 Single Base Substitution C-T INTERGENIC HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN1136-S.SNP.12:4116938 chr12:004116938 0 W/4116938-4116938 FN1136-S Single Base Substitution G-A INTERGENIC HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN1742-S.SNP.12:4117187 chr12:004117187 0 W/4117187-4117187 FN1742-S SNP G -> A AC=1;AN=188;BQB=0.996833;DP=3645;DP4=1632,1973,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.04157e-12;MQSB=0.973052;RPB=0.911195;SGB=38.7926;VDB=0.732657;EFF=INTERGENIC(MODIFIER||||||||||1) FN4100-S.SNP.12:4124400 chr12:004124400 0 W/4124400-4124400 FN4100-S SNP A -> T AC=1;AN=182;BQB=0.923602;DP=2870;DP4=1340,1449,14,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.59241e-12;MQSB=0.982184;RPB=0.921405;SGB=70.7363;VDB=0.965507;EFF=INTERGENIC(MODIFIER||||||||||1) FN590-S.SNP.12:4128713 chr12:004128713 0 W/4128713-4128713 FN590-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN3468-S.SNP.12:4130040 chr12:004130040 0 W/4130040-4130040 FN3468-S SNP G -> A AC=1;AN=184;BQB=0.994224;DP=3377;DP4=2010,1294,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0396802;MQB=0.322984;MQSB=0.0121956;RPB=0.0241466;SGB=57.786;VDB=0.011779;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R692H|862|LOC_Os12g08100|protein_coding|CODING|LOC_Os12g08100.1|4|1) FN737-S.SNP.12:4134251 chr12:004134251 0 W/4134251-4134251 FN737-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN848-S.SNP.12:4141829 chr12:004141829 0 W/4141829-4141829 FN848-S Single Base Substitution T-C INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN3480-S.SNP.12:4142250 chr12:004142250 0 W/4142250-4142250 FN3480-S SNP A -> T AC=2;AN=184;BQB=0.984546;DP=2932;DP4=1501,1335,16,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.26923e-14;MQSB=0.933785;RPB=0.61305;SGB=116.569;VDB=0.23159;EFF=INTERGENIC(MODIFIER||||||||||1) FN831-S.SNP.12:4146095 chr12:004146095 0 W/4146095-4146095 FN831-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN1702-S.SNP.12:4150126 chr12:004150126 0 W/4150126-4150126 FN1702-S SNP G -> C AC=1;AN=188;BQB=0.378479;DP=2895;DP4=1222,1643,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.57448e-08;MQSB=0.985958;RPB=0.957261;SGB=-12.2833;VDB=0.00481933;EFF=INTERGENIC(MODIFIER||||||||||1) FN2640-S.SNP.12:4151183 chr12:004151183 0 W/4151183-4151183 FN2640-S SNP C -> T AC=2;AN=200;BQB=0.840627;DP=4688;DP4=2363,2035,23,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.22256e-29;MQSB=0.988093;RPB=0.987083;SGB=60.8554;VDB=0.18252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.12:4161436 chr12:004161436 0 W/4161436-4161436 FN3890-S SNP C -> T AC=1;AN=158;BQB=0.997061;DP=2214;DP4=1114,1021,9,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.67476e-11;MQSB=0.635507;RPB=0.96024;SGB=82.0227;VDB=0.277213;EFF=INTERGENIC(MODIFIER||||||||||1) FN4138-S.SNP.12:4174154 chr12:004174154 0 W/4174154-4174154 FN4138-S SNP T -> C AC=2;AN=170;BQB=0.175915;DP=2550;DP4=1211,1285,15,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.37062e-09;MQSB=0.982245;RPB=0.785425;SGB=83.4133;VDB=0.870961;EFF=INTRON(MODIFIER||||467|LOC_Os12g08170|protein_coding|CODING|LOC_Os12g08170.1|3|1) FN2397.SNP.12:4177832 chr12:004177832 0 W/4177832-4177832 FN2397 SNP C -> T AC=1;AN=200;BQB=0.498542;DP=4756;DP4=2314,2102,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.88156e-10;MQSB=0.998357;RPB=0.521593;SGB=68.0801;VDB=0.318781;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.12:4178375 chr12:004178375 0 W/4178375-4178375 FN2488 SNP A -> G AC=1;AN=200;BQB=0.986916;DP=5063;DP4=2396,2472,12,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000197511;MQB=1.46701e-17;MQSB=0.426359;RPB=0.0533479;SGB=127.947;VDB=0.0302471;EFF=INTERGENIC(MODIFIER||||||||||1) FN4066-S.SNP.12:4189904 chr12:004189904 0 W/4189904-4189904 FN4066-S SNP G -> C AC=1;AN=168;BQB=0.667228;DP=2452;DP4=1297,1062,4,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00311479;MQSB=0.720448;RPB=0.989714;SGB=5.1694;VDB=0.269436;EFF=UTR_3_PRIME(MODIFIER||234||188|LOC_Os12g08200|protein_coding|CODING|LOC_Os12g08200.1|1|1) FN762-S.SNP.12:4201939 chr12:004201939 0 W/4201939-4201939 FN762-S Single Base Substitution T-C INTRON HET SNo: 684, Mutant_ID: FN762-S, Generation: M2, Mutations: 76, Genes: 70, Seed availability: Yes. FN2436.SNP.12:4202527 chr12:004202527 0 W/4202527-4202527 FN2436 SNP C -> A AC=1;AN=200;BQB=0.598902;DP=4770;DP4=2256,2155,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.97918e-15;MQSB=0.999941;RPB=0.875931;SGB=60.747;VDB=0.37626;EFF=UTR_3_PRIME(MODIFIER||159||161|LOC_Os12g08230|protein_coding|CODING|LOC_Os12g08230.1|6|1) FN2436.SNP.12:4202528 chr12:004202528 0 W/4202528-4202528 FN2436 SNP T -> A AC=1;AN=200;BQB=0.446825;DP=4785;DP4=2293,2199,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24174e-15;MQSB=0.9754;RPB=0.799792;SGB=114.132;VDB=0.312267;EFF=UTR_3_PRIME(MODIFIER||160||161|LOC_Os12g08230|protein_coding|CODING|LOC_Os12g08230.1|6|1) FN726-S.SNP.12:4203469 chr12:004203469 0 W/4203469-4203469 FN726-S Single Base Substitution A-C INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2666-S.SNP.12:4215861 chr12:004215861 0 W/4215861-4215861 FN2666-S SNP A -> G AC=1;AN=200;BQB=0.839992;DP=5194;DP4=2518,2425,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.43274e-17;MQSB=0.890026;RPB=0.933897;SGB=60.747;VDB=0.449052;EFF=INTRON(MODIFIER||||360|LOC_Os12g08270|protein_coding|CODING|LOC_Os12g08270.1|2|1) FN684-S.SNP.12:4221108 chr12:004221108 0 W/4221108-4221108 FN684-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g08290 U-box domain containing protein, putative, expressed SNo: 617, Mutant_ID: FN684-S, Generation: M2, Mutations: 73, Genes: 49, Seed availability: Yes. FN3449-S.SNP.12:4222971 chr12:004222971 0 W/4222971-4222971 FN3449-S SNP G -> A AC=1;AN=184;BQB=0.867277;DP=3501;DP4=1622,1793,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20182e-12;MQSB=0.842769;RPB=0.903295;SGB=60.4004;VDB=0.681862;EFF=INTERGENIC(MODIFIER||||||||||1) FN4108-S.SNP.12:4224622 chr12:004224622 0 W/4224622-4224622 FN4108-S SNP G -> T AC=2;AN=182;BQB=0.999757;DP=2607;DP4=1330,1214,9,9;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.63654e-10;MQSB=0.991847;RPB=0.486722;SGB=75.6874;VDB=0.373679;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cTt|R177L|464|LOC_Os12g08300|protein_coding|CODING|LOC_Os12g08300.1|3|1) FN3679-S.SNP.12:4228624 chr12:004228624 0 W/4228624-4228624 FN3679-S SNP G -> C AC=1;AN=190;BQB=0.996177;DP=1001;DP4=489,442,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.00453344;MQSB=0.579729;RPB=0.174449;SGB=26.3271;VDB=0.593541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3554-S.SNP.12:4229610 chr12:004229610 0 W/4229610-4229610 FN3554-S SNP T -> A AC=2;AN=188;BQB=0.781451;DP=2518;DP4=1384,1053,14,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.4721e-11;MQSB=0.873902;RPB=0.733709;SGB=85.3253;VDB=0.567935;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.12:4229865 chr12:004229865 0 W/4229865-4229865 FN-13 Single Base Substitution A-G INTERGENIC HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN1319-S.SNP.12:4231670 chr12:004231670 0 W/4231670-4231670 FN1319-S Single Base Substitution G-A INTRON HET SNo: 1122, Mutant_ID: FN1319-S, Generation: M2, Mutations: 77, Genes: 185, Seed availability: Yes. FN2404.SNP.12:4233083 chr12:004233083 0 W/4233083-4233083 FN2404 SNP G -> A AC=1;AN=200;BQB=0.925723;DP=5730;DP4=2910,2476,32,30;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.00802792;MQB=0.00509787;MQSB=0.00732042;RPB=0.938903;SGB=146.718;VDB=0.792684;EFF=INTERGENIC(MODIFIER||||||||||1) FN-401.SNP.12:4236647 chr12:004236647 0 W/4236647-4236647 FN-401 Single Base Substitution G-A INTERGENIC HET SNo: 388, Mutant_ID: FN-401, Generation: M2, Mutations: 47, Genes: 49, Seed availability: Yes. FN401-S.SNP.12:4236647 chr12:004236647 0 W/4236647-4236647 FN401-S Single Base Substitution G-A INTERGENIC HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN2553-S.SNP.12:4236762 chr12:004236762 0 W/4236762-4236762 FN2553-S SNP A -> T AC=1;AN=198;BQB=0.97827;DP=4400;DP4=2222,1942,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0215909;MQB=0.000157775;MQSB=7.11425e-37;RPB=0.997607;SGB=36.5539;VDB=0.419848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.12:4236766 chr12:004236766 0 W/4236766-4236766 FN2553-S SNP T -> C AC=1;AN=198;BQB=0.621846;DP=4384;DP4=2275,1862,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0230383;MQB=0.000112058;MQSB=3.20425e-36;RPB=0.789781;SGB=40.149;VDB=0.535595;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.12:4238928 chr12:004238928 0 W/4238928-4238928 FN1617-S Single Base Substitution G-A INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2083-S.SNP.12:4241547 chr12:004241547 0 W/4241547-4241547 FN2083-S SNP T -> C AC=1;AN=168;BQB=0.812533;DP=2714;DP4=911,1755,10,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.47778e-11;MQSB=0.878604;RPB=0.983853;SGB=-77.4832;VDB=0.10713;EFF=INTERGENIC(MODIFIER||||||||||1) FN-330.SNP.12:4247888 chr12:004247888 0 W/4247888-4247888 FN-330 Single Base Substitution G-A INTERGENIC HOMO SNo: 323, Mutant_ID: FN-330, Generation: M2, Mutations: 42, Genes: 73, Seed availability: Yes. FN1300-S.SNP.12:4249794 chr12:004249794 0 W/4249794-4249794 FN1300-S Single Base Substitution T-G INTRON HOMO SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN2630-S.SNP.12:4252596 chr12:004252596 0 W/4252596-4252596 FN2630-S SNP G -> T AC=1;AN=200;BQB=0.272947;DP=5386;DP4=2597,2484,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35788e-08;MQSB=0.86183;RPB=0.467636;SGB=72.6852;VDB=0.253637;EFF=INTERGENIC(MODIFIER||||||||||1) FN2284.SNP.12:4253986 chr12:004253986 0 W/4253986-4253986 FN2284 SNP T -> C AC=1;AN=192;BQB=0.686524;DP=4492;DP4=1848,1931,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.36627e-16;MQSB=0.953422;RPB=0.779337;SGB=62.2505;VDB=0.464191;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L355|736|LOC_Os12g08360|protein_coding|CODING|LOC_Os12g08360.1|1|1) FN4009-S.SNP.12:4266053 chr12:004266053 0 W/4266053-4266053 FN4009-S SNP G -> C AC=1;AN=168;BQB=0.698461;DP=3266;DP4=1703,1399,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.15478e-06;MQSB=0.572282;RPB=0.733069;SGB=12.4615;VDB=0.376838;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.12:4266649 chr12:004266649 0 W/4266649-4266649 CW-631-3-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN3416-S.SNP.12:4267973 chr12:004267973 0 W/4267973-4267973 FN3416-S SNP G -> A AC=1;AN=184;BQB=0.924856;DP=3733;DP4=1748,1849,2,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.23007e-06;MQSB=0.996054;RPB=0.636531;SGB=35.1773;VDB=0.650146;EFF=INTERGENIC(MODIFIER||||||||||1) FN3856-S.SNP.12:4268389 chr12:004268389 0 W/4268389-4268389 FN3856-S SNP G -> A AC=1;AN=158;BQB=0.863245;DP=1978;DP4=927,939,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.00062e-05;MQSB=0.803769;RPB=0.545077;SGB=11.9715;VDB=0.310584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.12:4270254 chr12:004270254 0 W/4270254-4270254 FN3522-S SNP C -> G AC=2;AN=188;BQB=0.822806;DP=2837;DP4=1450,1294,17,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.43852e-15;MQSB=0.568701;RPB=0.670154;SGB=112.585;VDB=0.446718;EFF=INTERGENIC(MODIFIER||||||||||1) FN3798-S.SNP.12:4275280 chr12:004275280 0 W/4275280-4275280 FN3798-S SNP A -> G AC=1;AN=190;BQB=0.929553;DP=2893;DP4=1493,1326,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.98322e-08;MQSB=0.972762;RPB=0.991691;SGB=49.0954;VDB=0.503225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.12:4277653 chr12:004277653 0 W/4277653-4277653 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.13863;DP=4742;DP4=2100,2271,10,6;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.00864614;MQB=0.0281589;MQSB=0.773675;RPB=0.19847;SGB=47.4799;VDB=0.00323978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.12:4280020 chr12:004280020 0 W/4280020-4280020 FN2472 SNP T -> C AC=1;AN=200;BQB=0.487577;DP=4243;DP4=1950,1956,7,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0124912;MQB=0.000122715;MQSB=3.02526e-10;RPB=0.998308;SGB=40.2696;VDB=0.822094;EFF=INTRON(MODIFIER||||128|LOC_Os12g08420|protein_coding|CODING|LOC_Os12g08420.1|1|1) FN3717-S.SNP.12:4282278 chr12:004282278 0 W/4282278-4282278 FN3717-S SNP C -> T AC=2;AN=190;BQB=0.982903;DP=1726;DP4=785,879,2,6;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.00579374;MQB=0.0576918;MQSB=0.365154;RPB=0.999094;SGB=30.8803;VDB=0.841906;EFF=INTERGENIC(MODIFIER||||||||||1) FN2554-S.SNP.12:4286552 chr12:004286552 0 W/4286552-4286552 FN2554-S SNP C -> G AC=1;AN=198;BQB=0.201194;DP=2999;DP4=1480,1106,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0156719;MQB=0.206883;MQSB=0.0943068;RPB=0.936562;SGB=11.1786;VDB=0.170536;EFF=INTRON(MODIFIER||||705|LOC_Os12g08430|protein_coding|CODING|LOC_Os12g08430.1|1|1) FN-188.SNP.12:4288086 chr12:004288086 0 W/4288086-4288086 FN-188 Single Base Substitution A-G INTRON HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN1069-S.SNP.12:4304871 chr12:004304871 0 W/4304871-4304871 FN1069-S Single Base Substitution C-T INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN4230-S.SNP.12:4305002 chr12:004305002 0 W/4305002-4305002 FN4230-S SNP A -> G AC=1;AN=170;BQB=0.993471;DP=2806;DP4=1318,1373,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.46126e-11;MQSB=0.986204;RPB=0.90708;SGB=55.5339;VDB=0.332557;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S39G|807|LOC_Os12g08490|protein_coding|CODING|LOC_Os12g08490.1|1|1) FN2331.SNP.12:4309237 chr12:004309237 0 W/4309237-4309237 FN2331 SNP G -> A AC=1;AN=192;BQB=0.537869;DP=5144;DP4=2428,2440,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.45598e-09;MQSB=0.913388;RPB=0.138012;SGB=46.9087;VDB=0.163924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2422.SNP.12:4310504 chr12:004310504 0 W/4310504-4310504 FN2422 SNP G -> A AC=2;AN=200;BQB=0.501145;DP=4485;DP4=2019,2107,21,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.74756e-25;MQSB=0.581695;RPB=0.886651;SGB=148.425;VDB=0.457816;EFF=INTERGENIC(MODIFIER||||||||||1) FN1463-S.SNP.12:4311891 chr12:004311891 0 W/4311891-4311891 FN1463-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g08500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN-394.SNP.12:4322103 chr12:004322103 0 W/4322103-4322103 FN-394 Single Base Substitution C-T INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2498.SNP.12:4325257 chr12:004325257 0 W/4325257-4325257 FN2498 SNP C -> A AC=1;AN=200;BQB=0.175495;DP=4301;DP4=2077,1950,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67037e-08;MQSB=0.600395;RPB=0.398743;SGB=43.8747;VDB=0.808337;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.12:4326063 chr12:004326063 0 W/4326063-4326063 FN3859-S SNP A -> T AC=1;AN=158;BQB=0.89115;DP=2567;DP4=1269,1231,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.08703e-05;MQSB=0.989135;RPB=0.938645;SGB=33.9591;VDB=0.676898;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.12:4330728 chr12:004330728 0 W/4330728-4330728 705-6 Single Base Substitution G-C INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN2224-S.SNP.12:4333211 chr12:004333211 0 W/4333211-4333211 FN2224-S SNP T -> G AC=1;AN=190;BQB=0.887164;DP=4827;DP4=2238,2388,14,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03942e-13;MQSB=0.605841;RPB=0.644146;SGB=78.7471;VDB=0.816837;EFF=INTERGENIC(MODIFIER||||||||||1) FN788-S.SNP.12:4334185 chr12:004334185 0 W/4334185-4334185 FN788-S Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1455-S.SNP.12:4334863 chr12:004334863 0 W/4334863-4334863 FN1455-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 1224, Mutant_ID: FN1455-S, Generation: M2, Mutations: 61, Genes: 77, Seed availability: Yes. FN3652-S.SNP.12:4336123 chr12:004336123 0 W/4336123-4336123 FN3652-S SNP A -> G AC=1;AN=190;BQB=0.948428;DP=3000;DP4=1490,1459,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.30193e-06;MQSB=0.247092;RPB=0.348598;SGB=35.4339;VDB=0.015527;EFF=UTR_3_PRIME(MODIFIER||883||129|LOC_Os12g08550|protein_coding|CODING|LOC_Os12g08550.1|1|1) FN3652-S.SNP.12:4336124 chr12:004336124 0 W/4336124-4336124 FN3652-S SNP A -> T AC=1;AN=190;BQB=0.922706;DP=2993;DP4=1472,1457,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.41698e-06;MQSB=0.212016;RPB=0.213582;SGB=25.439;VDB=0.0199125;EFF=UTR_3_PRIME(MODIFIER||882||129|LOC_Os12g08550|protein_coding|CODING|LOC_Os12g08550.1|1|1) FN4047-S.SNP.12:4337467 chr12:004337467 0 W/4337467-4337467 FN4047-S SNP T -> C AC=2;AN=168;BQB=0.699103;DP=2681;DP4=1106,1426,8,15;HOB=0.0235261;ICB=0.494119;MQ=43;MQ0F=0.0130548;MQB=0.0561817;MQSB=0.97668;RPB=0.867479;SGB=69.0561;VDB=0.973991;EFF=UTR_5_PRIME(MODIFIER||72||129|LOC_Os12g08550|protein_coding|CODING|LOC_Os12g08550.1|1|1) FN4041-S.SNP.12:4345055 chr12:004345055 0 W/4345055-4345055 FN4041-S SNP C -> T AC=1;AN=168;BQB=0.982641;DP=2814;DP4=1199,1497,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.29929e-08;MQSB=0.920008;RPB=0.964401;SGB=34.748;VDB=0.389823;EFF=INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.1|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.4|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.3|2|1) FN2430.SNP.12:4346089 chr12:004346089 0 W/4346089-4346089 FN2430 SNP G -> A AC=1;AN=200;BQB=0.972229;DP=4068;DP4=2063,1774,7,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20761e-06;MQSB=0.999238;RPB=0.914008;SGB=25.849;VDB=0.205475;EFF=INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.1|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.4|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.3|2|1) FN3455-S.SNP.12:4350005 chr12:004350005 0 W/4350005-4350005 FN3455-S SNP C -> G AC=2;AN=184;BQB=0.960446;DP=3264;DP4=1900,1266,17,19;HOB=0.0215028;ICB=0.494625;MQ=24;MQ0F=0.190564;MQB=0.0164341;MQSB=0;RPB=0.921519;SGB=116.749;VDB=0.221429;EFF=INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.1|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.4|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.3|2|1) FN3366-S.SNP.12:4351847 chr12:004351847 0 W/4351847-4351847 FN3366-S SNP C -> T AC=1;AN=184;BQB=0.981778;DP=2839;DP4=1448,1284,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0038746;MQB=0.00128026;MQSB=0.157461;RPB=0.900399;SGB=30.6558;VDB=0.0445306;EFF=INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.1|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.4|2|1),INTRON(MODIFIER||||119|LOC_Os12g08564|protein_coding|CODING|LOC_Os12g08564.3|2|1) FN2351.SNP.12:4360018 chr12:004360018 0 W/4360018-4360018 FN2351 SNP G -> A AC=1;AN=192;BQB=0.964258;DP=4815;DP4=2235,2262,7,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.35756e-11;MQSB=0.98654;RPB=0.940133;SGB=-37.9417;VDB=0.517005;EFF=INTERGENIC(MODIFIER||||||||||1) FN734-S.SNP.12:4371566 chr12:004371566 0 W/4371566-4371566 FN734-S Single Base Substitution A-T INTERGENIC HOMO SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN-312.SNP.12:4371711 chr12:004371711 0 W/4371711-4371711 FN-312 Single Base Substitution C-T INTERGENIC HET SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN3523-S.SNP.12:4374634 chr12:004374634 0 W/4374634-4374634 FN3523-S SNP C -> G AC=1;AN=188;BQB=0.999011;DP=4031;DP4=1976,1899,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.26521e-09;MQSB=0.922609;RPB=0.692465;SGB=57.244;VDB=0.696646;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E77D|249|LOC_Os12g08600|protein_coding|CODING|LOC_Os12g08600.1|1|1) W278-3-1.SNP.12:4382603 chr12:004382603 0 W/4382603-4382603 W278-3-1 Single Base Substitution G-A INTRON HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN-338.SNP.12:4386611 chr12:004386611 0 W/4386611-4386611 FN-338 Single Base Substitution T-C INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-338.SNP.12:4386612 chr12:004386612 0 W/4386612-4386612 FN-338 Single Base Substitution C-T INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN3923-S.SNP.12:4387990 chr12:004387990 0 W/4387990-4387990 FN3923-S SNP C -> T AC=1;AN=158;BQB=0.999973;DP=2420;DP4=1002,1350,8,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.39266e-07;MQSB=0.834521;RPB=0.984922;SGB=51.4366;VDB=0.564442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R195H|280|LOC_Os12g08640|protein_coding|CODING|LOC_Os12g08640.1|2|1) FN3920-S.SNP.12:4388401 chr12:004388401 0 W/4388401-4388401 FN3920-S SNP T -> A AC=2;AN=158;BQB=0.843067;DP=2591;DP4=1413,1068,19,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0.000385951;MQB=2.87666e-16;MQSB=0.889796;RPB=0.984897;SGB=61.7299;VDB=0.612875;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R77W|280|LOC_Os12g08640|protein_coding|CODING|LOC_Os12g08640.1|1|1) FN1547-S.SNP.12:4391215 chr12:004391215 0 W/4391215-4391215 FN1547-S Single Base Substitution A-G SPLICE_SITE_REGION HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN690-S.SNP.12:4394032 chr12:004394032 0 W/4394032-4394032 FN690-S Single Base Substitution A-T INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1523-S.SNP.12:4394752 chr12:004394752 0 W/4394752-4394752 FN1523-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN2685-S.SNP.12:4397715 chr12:004397715 0 W/4397715-4397715 FN2685-S SNP C -> T AC=1;AN=200;BQB=0.415591;DP=4753;DP4=2321,2152,10,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.24211e-13;MQSB=0.893318;RPB=0.979833;SGB=109.527;VDB=0.339407;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F188|768|LOC_Os12g08670|protein_coding|CODING|LOC_Os12g08670.1|1|1) FN2657-S.SNP.12:4407270 chr12:004407270 0 W/4407270-4407270 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.738644;DP=5083;DP4=2515,2279,15,18;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.015542;MQB=0.451152;MQSB=1.50986e-05;RPB=0.0607039;SGB=71.1676;VDB=0.290062;EFF=INTERGENIC(MODIFIER||||||||||1) FN507-S.SNP.12:4412438 chr12:004412438 0 W/4412438-4412438 FN507-S Single Base Substitution C-T INTERGENIC HET SNo: 505, Mutant_ID: FN507-S, Generation: M2, Mutations: 67, Genes: 176, Seed availability: Yes. FN4150-S.SNP.12:4416780 chr12:004416780 0 W/4416780-4416780 FN4150-S SNP A -> T AC=1;AN=170;BQB=0.878254;DP=2458;DP4=1207,1146,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.00732303;MQB=0.0779475;MQSB=0.597153;RPB=0.459392;SGB=48.6486;VDB=0.485996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.12:4417373 chr12:004417373 0 W/4417373-4417373 FN1089-S Single Base Substitution C-T INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN-181.SNP.12:4420677 chr12:004420677 0 W/4420677-4420677 FN-181 Single Base Substitution A-C INTERGENIC HOMO SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN814-S.SNP.12:4423830 chr12:004423830 0 W/4423830-4423830 FN814-S Single Base Substitution G-A INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN3518-S.SNP.12:4451975 chr12:004451975 0 W/4451975-4451975 FN3518-S SNP C -> G AC=2;AN=188;BQB=0.937941;DP=2552;DP4=1226,1245,10,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.15199e-14;MQSB=0.943522;RPB=0.951669;SGB=98.9552;VDB=0.911925;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.12:4454941 chr12:004454941 0 W/4454941-4454941 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.722458;DP=2375;DP4=1090,1212,6,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.97137e-10;MQSB=0.992788;RPB=0.398994;SGB=61.2001;VDB=0.788874;EFF=INTERGENIC(MODIFIER||||||||||1) FN3545-S.SNP.12:4459388 chr12:004459388 0 W/4459388-4459388 FN3545-S SNP C -> T AC=1;AN=188;BQB=0.708634;DP=2326;DP4=1134,1110,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.86715e-05;MQSB=0.974377;RPB=0.302716;SGB=21.8113;VDB=0.0846903;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G349D|1021|LOC_Os12g08725|protein_coding|CODING|LOC_Os12g08725.1|1|1) FN846-S.SNP.12:4461271 chr12:004461271 0 W/4461271-4461271 FN846-S Single Base Substitution A-C INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN1028-S.SNP.12:4467923 chr12:004467923 0 W/4467923-4467923 FN1028-S Single Base Substitution A-G INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN870-S.SNP.12:4470659 chr12:004470659 0 W/4470659-4470659 FN870-S Single Base Substitution G-A INTRON HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN3788-S.SNP.12:4472591 chr12:004472591 0 W/4472591-4472591 FN3788-S SNP A -> T AC=2;AN=190;BQB=0.591354;DP=2606;DP4=1135,1350,5,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.8837e-06;MQSB=0.99559;RPB=0.612677;SGB=43.2083;VDB=0.730337;EFF=INTRON(MODIFIER||||607|LOC_Os12g08740|protein_coding|CODING|LOC_Os12g08740.1|5|1),INTRON(MODIFIER||||371|LOC_Os12g08740|protein_coding|CODING|LOC_Os12g08740.2|5|1) FN3522-S.SNP.12:4473870 chr12:004473870 0 W/4473870-4473870 FN3522-S SNP G -> A AC=2;AN=188;BQB=0.43259;DP=2608;DP4=1270,1269,9,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.57517e-10;MQSB=0.918237;RPB=0.370594;SGB=38.7926;VDB=0.165071;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L344|607|LOC_Os12g08740|protein_coding|CODING|LOC_Os12g08740.1|11|1),SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L233|371|LOC_Os12g08740|protein_coding|CODING|LOC_Os12g08740.2|11|1) FN3925-S.SNP.12:4480294 chr12:004480294 0 W/4480294-4480294 FN3925-S SNP G -> T AC=1;AN=158;BQB=0.664464;DP=2242;DP4=1073,1064,5,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.04409e-09;MQSB=0.953398;RPB=0.972442;SGB=50.9207;VDB=0.093896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3504-S.SNP.12:4496162 chr12:004496162 0 W/4496162-4496162 FN3504-S SNP C -> A AC=1;AN=188;BQB=0.313871;DP=2873;DP4=1515,1306,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000149914;MQSB=0.979929;RPB=0.813261;SGB=25.3545;VDB=0.906563;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.12:4501090 chr12:004501090 0 W/4501090-4501090 FN3981-S SNP G -> A AC=2;AN=168;BQB=0.939994;DP=2414;DP4=1190,1140,8,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.01745e-08;MQSB=0.94903;RPB=0.171957;SGB=51.902;VDB=0.486437;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A129T|356|LOC_Os12g08760|protein_coding|CODING|LOC_Os12g08760.1|3|1) FN2233-S.SNP.12:4505540 chr12:004505540 0 W/4505540-4505540 FN2233-S SNP T -> C AC=1;AN=190;BQB=0.361818;DP=4944;DP4=2431,2290,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.56595e-06;MQSB=0.921627;RPB=0.451538;SGB=-0.550503;VDB=0.656235;EFF=INTERGENIC(MODIFIER||||||||||1) FN2774-S.SNP.12:4505540 chr12:004505540 0 W/4505540-4505540 FN2774-S SNP T -> C AC=2;AN=198;BQB=0.995222;DP=4327;DP4=2123,1982,20,24;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.44505e-25;MQSB=0.891123;RPB=0.568702;SGB=196.593;VDB=0.534721;EFF=INTERGENIC(MODIFIER||||||||||1) FN3664-S.SNP.12:4505540 chr12:004505540 0 W/4505540-4505540 FN3664-S SNP T -> C AC=2;AN=190;BQB=0.43145;DP=2988;DP4=1413,1487,14,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.34657e-15;MQSB=0.999838;RPB=0.122215;SGB=107.178;VDB=0.344185;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.12:4505540 chr12:004505540 0 W/4505540-4505540 FN3902-S SNP T -> C AC=2;AN=158;BQB=0.935337;DP=2553;DP4=1226,1244,17,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.00862e-18;MQSB=0.988244;RPB=0.898584;SGB=121.348;VDB=0.690295;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.12:4505540 chr12:004505540 0 W/4505540-4505540 FN942-S Single Base Substitution T-C INTERGENIC HOMO SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN728-S.SNP.12:4514966 chr12:004514966 0 W/4514966-4514966 FN728-S Single Base Substitution A-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN809-S.SNP.12:4515193 chr12:004515193 0 W/4515193-4515193 FN809-S Single Base Substitution G-C INTERGENIC HET SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN444-S.SNP.12:4519830 chr12:004519830 0 W/4519830-4519830 FN444-S Single Base Substitution C-A INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN845-S.SNP.12:4520779 chr12:004520779 0 W/4520779-4520779 FN845-S Single Base Substitution G-C INTERGENIC HET SNo: 752, Mutant_ID: FN845-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN3438-S.SNP.12:4527845 chr12:004527845 0 W/4527845-4527845 FN3438-S SNP A -> T AC=1;AN=184;BQB=0.484248;DP=3144;DP4=1463,1533,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.82281e-11;MQSB=0.889953;RPB=0.805671;SGB=89.4385;VDB=0.341303;EFF=UTR_5_PRIME(MODIFIER||911||595|LOC_Os12g08800|protein_coding|CODING|LOC_Os12g08800.1|1|1) FN3445-S.SNP.12:4532108 chr12:004532108 0 W/4532108-4532108 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.918255;DP=2631;DP4=1283,1299,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.37498e-05;MQSB=0.78142;RPB=0.790534;SGB=39.699;VDB=0.491369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E438K|595|LOC_Os12g08800|protein_coding|CODING|LOC_Os12g08800.1|8|1) FN3921-S.SNP.12:4535721 chr12:004535721 0 W/4535721-4535721 FN3921-S SNP A -> G AC=1;AN=158;BQB=0.927946;DP=2346;DP4=1229,1034,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000190518;MQSB=0.817813;RPB=0.940853;SGB=17.2267;VDB=0.566336;EFF=INTRON(MODIFIER||||438|LOC_Os12g08810|protein_coding|CODING|LOC_Os12g08810.1|2|1) FN2403.SNP.12:4538793 chr12:004538793 0 W/4538793-4538793 FN2403 SNP C -> T AC=1;AN=200;BQB=0.501144;DP=4638;DP4=2258,2165,9,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.36949e-05;MQSB=0.748011;RPB=0.910707;SGB=25.849;VDB=0.667402;EFF=INTERGENIC(MODIFIER||||||||||1) FN2556-S.SNP.12:4539511 chr12:004539511 0 W/4539511-4539511 FN2556-S SNP G -> C AC=1;AN=198;BQB=0.698719;DP=4270;DP4=1995,2083,16,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.54724e-14;MQSB=0.996856;RPB=0.0850193;SGB=79.6954;VDB=0.598527;EFF=INTERGENIC(MODIFIER||||||||||1) FN703-S.SNP.12:4545776 chr12:004545776 0 W/4545776-4545776 FN703-S Single Base Substitution A-G INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3355-S.SNP.12:4546348 chr12:004546348 0 W/4546348-4546348 FN3355-S SNP T -> C AC=1;AN=184;BQB=0.917783;DP=2597;DP4=1031,1462,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.49272e-09;MQSB=0.245618;RPB=0.943569;SGB=46.3132;VDB=0.559415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1499-S.SNP.12:4549966 chr12:004549966 0 W/4549966-4549966 FN1499-S Single Base Substitution A-G INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN-196.SNP.12:4553251 chr12:004553251 0 W/4553251-4553251 FN-196 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g08820 growth regulator related protein, putative, expressed SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3697-S.SNP.12:4562150 chr12:004562150 0 W/4562150-4562150 FN3697-S SNP A -> G AC=1;AN=190;BQB=0.238542;DP=3121;DP4=1648,1350,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000143173;MQSB=0.60097;RPB=0.60469;SGB=23.6597;VDB=0.0599872;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.12:4565197 chr12:004565197 0 W/4565197-4565197 FN-305 Single Base Substitution A-T INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-305.SNP.12:4565205 chr12:004565205 0 W/4565205-4565205 FN-305 Single Base Substitution A-G INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-277.SNP.12:4572535 chr12:004572535 0 W/4572535-4572535 FN-277 Single Base Substitution T-C INTERGENIC HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-139.SNP.12:4574699 chr12:004574699 0 W/4574699-4574699 FN-139 Single Base Substitution G-T INTERGENIC HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN3311-S.SNP.12:4576400 chr12:004576400 0 W/4576400-4576400 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.989267;DP=3473;DP4=1773,1555,9,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.53784e-12;MQSB=0.999557;RPB=0.662174;SGB=45.9712;VDB=0.134382;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.12:4584035 chr12:004584035 0 W/4584035-4584035 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2441.SNP.12:4601506 chr12:004601506 0 W/4601506-4601506 FN2441 SNP G -> A AC=1;AN=200;BQB=0.893618;DP=3535;DP4=2007,1274,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56418e-15;MQSB=0.52987;RPB=0.485151;SGB=83.5316;VDB=0.312978;EFF=INTERGENIC(MODIFIER||||||||||1) FN3756-S.SNP.12:4602922 chr12:004602922 0 W/4602922-4602922 FN3756-S SNP G -> T AC=1;AN=190;BQB=0.871254;DP=2723;DP4=1667,953,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07432e-07;MQSB=0.887585;RPB=0.976186;SGB=44.5415;VDB=0.107516;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.12:4603303 chr12:004603303 0 W/4603303-4603303 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.928811;DP=4709;DP4=2165,2301,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.76844e-06;MQSB=0.933708;RPB=0.824556;SGB=29.4541;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2459.SNP.12:4609672 chr12:004609672 0 W/4609672-4609672 FN2459 SNP C -> T AC=1;AN=200;BQB=0.621749;DP=4316;DP4=2374,1702,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000695088;MQB=4.63608e-10;MQSB=0.836484;RPB=0.714967;SGB=68.0801;VDB=0.760113;EFF=INTERGENIC(MODIFIER||||||||||1) FN548-S.SNP.12:4610690 chr12:004610690 0 W/4610690-4610690 FN548-S Single Base Substitution T-A INTERGENIC HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN3558-S.SNP.12:4610917 chr12:004610917 0 W/4610917-4610917 FN3558-S SNP C -> T AC=1;AN=188;BQB=0.987553;DP=2750;DP4=1438,1255,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.004;MQB=3.15038e-07;MQSB=0.461074;RPB=0.99372;SGB=71.6954;VDB=0.120862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1357-S.SNP.12:4611438 chr12:004611438 0 W/4611438-4611438 FN1357-S Single Base Substitution T-A INTERGENIC HET SNo: 1152, Mutant_ID: FN1357-S, Generation: M2, Mutations: 50, Genes: 26, Seed availability: Yes. FN1229-S.SNP.12:4618841 chr12:004618841 0 W/4618841-4618841 FN1229-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2655-S.SNP.12:4619092 chr12:004619092 0 W/4619092-4619092 FN2655-S SNP G -> T AC=1;AN=200;BQB=0.474496;DP=4459;DP4=1810,2375,13,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.97876e-17;MQSB=0.677228;RPB=0.237377;SGB=60.747;VDB=0.507519;EFF=INTERGENIC(MODIFIER||||||||||1) FN682-S.SNP.12:4620718 chr12:004620718 0 W/4620718-4620718 FN682-S Single Base Substitution T-C INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN2646-S.SNP.12:4620986 chr12:004620986 0 W/4620986-4620986 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.589651;DP=3986;DP4=1751,1976,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22174e-08;MQSB=0.0383115;RPB=0.172198;SGB=58.8698;VDB=0.0223815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3838-S.SNP.12:4621959 chr12:004621959 0 W/4621959-4621959 FN3838-S SNP T -> C AC=2;AN=190;BQB=0.889569;DP=2216;DP4=1379,732,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.52992e-09;MQSB=0.22573;RPB=0.729287;SGB=90.0802;VDB=0.613474;EFF=INTERGENIC(MODIFIER||||||||||1) FN902-S.SNP.12:4621959 chr12:004621959 0 W/4621959-4621959 FN902-S Single Base Substitution T-C INTERGENIC HET SNo: 808, Mutant_ID: FN902-S, Generation: M2, Mutations: 57, Genes: 22, Seed availability: Yes. FN2375.SNP.12:4625990 chr12:004625990 0 W/4625990-4625990 FN2375 SNP C -> T AC=2;AN=192;BQB=0.174187;DP=3675;DP4=1784,1225,14,7;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.50333e-08;MQSB=0.000149644;RPB=0.98088;SGB=64.7304;VDB=0.959334;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.12:4630026 chr12:004630026 0 W/4630026-4630026 FN1182-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2495.SNP.12:4630919 chr12:004630919 0 W/4630919-4630919 FN2495 SNP T -> A AC=1;AN=200;BQB=0.998746;DP=4441;DP4=2130,2003,6,3;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.98669e-06;MQSB=0.999905;RPB=0.0128499;SGB=22.2439;VDB=0.00332698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.12:4636969 chr12:004636969 0 W/4636969-4636969 FN2731-S SNP T -> A AC=2;AN=200;BQB=0.369689;DP=4879;DP4=2354,2284,20,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=8.48693e-17;MQSB=0.392073;RPB=0.919668;SGB=35.1726;VDB=0.0482551;EFF=INTERGENIC(MODIFIER||||||||||1) FN3674-S.SNP.12:4639675 chr12:004639675 0 W/4639675-4639675 FN3674-S SNP A -> G AC=1;AN=190;BQB=0.755892;DP=2846;DP4=1300,1396,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000226016;MQSB=0.964185;RPB=0.947804;SGB=25.439;VDB=0.729128;EFF=INTERGENIC(MODIFIER||||||||||1) FN-34.SNP.12:4642090 chr12:004642090 0 W/4642090-4642090 FN-34 Single Base Substitution T-A INTERGENIC Homo SNo: 34, Mutant_ID: FN-34, Generation: M2, Mutations: 27, Genes: 33, Seed availability: Yes. FN1513-S.SNP.12:4646173 chr12:004646173 0 W/4646173-4646173 FN1513-S Single Base Substitution C-A INTRON HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN1456-S.SNP.12:4646577 chr12:004646577 0 W/4646577-4646577 FN1456-S Single Base Substitution T-C INTRON HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. W577-3-1.SNP.12:4652104 chr12:004652104 0 W/4652104-4652104 W577-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1429, Mutant_ID: W577-3-1, Generation: M2, Mutations: 63, Genes: 53, Seed availability: Yes. FN2531-S.SNP.12:4656568 chr12:004656568 0 W/4656568-4656568 FN2531-S SNP T -> A AC=1;AN=198;BQB=0.258465;DP=4299;DP4=2053,2056,11,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.7268e-17;MQSB=0.994333;RPB=0.990487;SGB=113.881;VDB=0.125448;EFF=UTR_3_PRIME(MODIFIER||178||78|LOC_Os12g08930|protein_coding|CODING|LOC_Os12g08930.1|1|1) FN2531-S.SNP.12:4656569 chr12:004656569 0 W/4656569-4656569 FN2531-S SNP T -> A AC=1;AN=198;BQB=0.139296;DP=4300;DP4=2040,2046,11,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.06858e-18;MQSB=0.967727;RPB=0.993889;SGB=90.4807;VDB=0.078362;EFF=UTR_3_PRIME(MODIFIER||177||78|LOC_Os12g08930|protein_coding|CODING|LOC_Os12g08930.1|1|1) FN2411.SNP.12:4661693 chr12:004661693 0 W/4661693-4661693 FN2411 SNP G -> A AC=1;AN=200;BQB=0.0832248;DP=4359;DP4=2149,1968,12,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.15509e-12;MQSB=0.933157;RPB=0.340961;SGB=76.3213;VDB=0.885927;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.12:4668678 chr12:004668678 0 W/4668678-4668678 FN-149 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g08940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN2403.SNP.12:4669108 chr12:004669108 0 W/4669108-4669108 FN2403 SNP C -> A AC=1;AN=200;BQB=0.915347;DP=4451;DP4=1992,2230,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9035e-08;MQSB=0.99279;RPB=0.990829;SGB=49.6594;VDB=0.974316;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P435|447|LOC_Os12g08940|protein_coding|CODING|LOC_Os12g08940.1|2|1) FN2258-S.SNP.12:4673325 chr12:004673325 0 W/4673325-4673325 FN2258-S SNP A -> T AC=1;AN=190;BQB=0.865198;DP=4595;DP4=1995,2088,17,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.92348e-12;MQSB=0.361548;RPB=0.309418;SGB=-39.4473;VDB=0.244769;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.12:4673801 chr12:004673801 0 W/4673801-4673801 FN1094-S Single Base Substitution A-T INTERGENIC HET SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN-208.SNP.12:4681076 chr12:004681076 0 W/4681076-4681076 FN-208 Single Base Substitution G-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN3429-S.SNP.12:4686034 chr12:004686034 0 W/4686034-4686034 FN3429-S SNP G -> A AC=1;AN=184;BQB=0.997773;DP=2396;DP4=1156,1187,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.31306e-05;MQSB=0.987257;RPB=0.835279;SGB=30.6558;VDB=0.657519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M217I|335|LOC_Os12g08960|protein_coding|CODING|LOC_Os12g08960.1|3|1) FN2550-S.SNP.12:4690341 chr12:004690341 0 W/4690341-4690341 FN2550-S SNP C -> T AC=1;AN=198;BQB=0.944183;DP=4495;DP4=1767,2395,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000360233;MQSB=0.913458;RPB=0.859572;SGB=18.5788;VDB=0.793142;EFF=INTERGENIC(MODIFIER||||||||||1) FN854-S.SNP.12:4696359 chr12:004696359 0 W/4696359-4696359 FN854-S Single Base Substitution G-A INTRON HET SNo: 760, Mutant_ID: FN854-S, Generation: M2, Mutations: 41, Genes: 14, Seed availability: Yes. FN2664-S.SNP.12:4703510 chr12:004703510 0 W/4703510-4703510 FN2664-S SNP G -> A AC=1;AN=200;BQB=0.766285;DP=4475;DP4=2066,2209,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.38626e-09;MQSB=0.995314;RPB=0.999827;SGB=26.8797;VDB=0.335123;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.12:4705001 chr12:004705001 0 W/4705001-4705001 FN2476 SNP C -> T AC=2;AN=200;BQB=0.918082;DP=4812;DP4=2476,2072,26,20;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000831255;MQB=5.27427e-17;MQSB=0.71688;RPB=0.603134;SGB=105.035;VDB=0.309529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1033-S.SNP.12:4705663 chr12:004705663 0 W/4705663-4705663 FN1033-S Single Base Substitution G-A INTERGENIC HET SNo: 929, Mutant_ID: FN1033-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN2653-S.SNP.12:4709685 chr12:004709685 0 W/4709685-4709685 FN2653-S SNP T -> G AC=1;AN=200;BQB=0.666231;DP=5161;DP4=2568,2385,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.76714e-15;MQSB=0.980465;RPB=0.641252;SGB=52.9314;VDB=0.747092;EFF=INTRON(MODIFIER||||548|LOC_Os12g09000|protein_coding|CODING|LOC_Os12g09000.1|7|1),INTRON(MODIFIER||||388|LOC_Os12g09000|protein_coding|CODING|LOC_Os12g09000.2|7|1) FN3292-S.SNP.12:4711988 chr12:004711988 0 W/4711988-4711988 FN3292-S SNP A -> C AC=1;AN=184;BQB=0.18968;DP=3562;DP4=1746,1670,8,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.80039e-07;MQSB=0.977665;RPB=0.0428662;SGB=11.3677;VDB=0.473953;EFF=INTERGENIC(MODIFIER||||||||||1) FN2666-S.SNP.12:4719648 chr12:004719648 0 W/4719648-4719648 FN2666-S SNP C -> A AC=1;AN=200;BQB=0.259381;DP=4733;DP4=2102,2179,15,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.10795e-18;MQSB=0.95782;RPB=0.577793;SGB=76.378;VDB=0.859073;EFF=INTERGENIC(MODIFIER||||||||||1) W278-3-1.SNP.12:4724510 chr12:004724510 0 W/4724510-4724510 W278-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1519-S.SNP.12:4732579 chr12:004732579 0 W/4732579-4732579 FN1519-S Single Base Substitution C-T INTRON HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN3752-S.SNP.12:4735648 chr12:004735648 0 W/4735648-4735648 FN3752-S SNP A -> C AC=1;AN=190;BQB=0.63424;DP=2867;DP4=1181,1551,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000217526;MQSB=0.997742;RPB=0.983344;SGB=18.552;VDB=0.437876;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.12:4740550 chr12:004740550 0 W/4740550-4740550 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.949928;DP=5118;DP4=2246,2534,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.05116e-13;MQSB=0.896852;RPB=0.769237;SGB=69.1109;VDB=0.222489;EFF=INTERGENIC(MODIFIER||||||||||1) FN862-S.SNP.12:4744226 chr12:004744226 0 W/4744226-4744226 FN862-S Single Base Substitution G-A INTERGENIC HOMO SNo: 768, Mutant_ID: FN862-S, Generation: M2, Mutations: 46, Genes: 14, Seed availability: Yes. FN2740-S.SNP.12:4747153 chr12:004747153 0 W/4747153-4747153 FN2740-S SNP G -> C AC=1;AN=200;BQB=0.999756;DP=4690;DP4=2204,2172,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.11374e-08;MQSB=0.429653;RPB=0.10114;SGB=58.8698;VDB=0.0429608;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E175D|323|LOC_Os12g09080|protein_coding|CODING|LOC_Os12g09080.1|1|1) FN2432.SNP.12:4750053 chr12:004750053 0 W/4750053-4750053 FN2432 SNP T -> C AC=2;AN=200;BQB=0.947252;DP=4585;DP4=2180,2095,23,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.30745e-25;MQSB=0.999823;RPB=0.61363;SGB=201.63;VDB=0.618783;EFF=UTR_3_PRIME(MODIFIER||5885||313|LOC_Os12g09089|protein_coding|CODING|LOC_Os12g09089.2|6|1),INTRON(MODIFIER||||313|LOC_Os12g09089|protein_coding|CODING|LOC_Os12g09089.1|5|1) FN2484.SNP.12:4752171 chr12:004752171 0 W/4752171-4752171 FN2484 SNP T -> A AC=1;AN=200;BQB=0.499908;DP=4645;DP4=1985,2375,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.53032e-10;MQSB=0.689931;RPB=0.810749;SGB=68.0801;VDB=0.0279625;EFF=INTRON(MODIFIER||||313|LOC_Os12g09089|protein_coding|CODING|LOC_Os12g09089.1|5|1),INTRON(MODIFIER||||313|LOC_Os12g09089|protein_coding|CODING|LOC_Os12g09089.2|5|1) FN488-S.SNP.12:4755836 chr12:004755836 0 W/4755836-4755836 FN488-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-250.SNP.12:4778457 chr12:004778457 0 W/4778457-4778457 FN-250 Single Base Substitution A-G INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN3902-S.SNP.12:4785637 chr12:004785637 0 W/4785637-4785637 FN3902-S SNP T -> C AC=1;AN=158;BQB=0.504683;DP=2692;DP4=1160,1372,11,11;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00222883;MQB=2.0696e-08;MQSB=0.00270542;RPB=0.987715;SGB=11.6723;VDB=0.5939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.12:4795600 chr12:004795600 0 W/4795600-4795600 FN1163-S Single Base Substitution A-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2780-S.SNP.12:4803142 chr12:004803142 0 W/4803142-4803142 FN2780-S SNP A -> G AC=2;AN=198;BQB=0.964271;DP=3843;DP4=2101,1512,30,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.16472e-26;MQSB=0.586969;RPB=0.596691;SGB=112.388;VDB=0.276628;EFF=INTRON(MODIFIER||||373|LOC_Os12g09200|protein_coding|CODING|LOC_Os12g09200.1|2|1) FN1529-S.SNP.12:4806973 chr12:004806973 0 W/4806973-4806973 FN1529-S Single Base Substitution C-T INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3056-S.SNP.12:4809109 chr12:004809109 0 W/4809109-4809109 FN3056-S SNP C -> T AC=1;AN=184;BQB=0.834685;DP=4193;DP4=1997,2081,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.13031e-14;MQSB=0.967435;RPB=0.96019;SGB=43.4494;VDB=0.309349;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D146N|282|LOC_Os12g09210|protein_coding|CODING|LOC_Os12g09210.1|1|1) FN-208.SNP.12:4824455 chr12:004824455 0 W/4824455-4824455 FN-208 Single Base Substitution C-A INTERGENIC HET SNo: 208, Mutant_ID: FN-208, Generation: M2, Mutations: 52, Genes: 107, Seed availability: Yes. FN1150-S.SNP.12:4826397 chr12:004826397 0 W/4826397-4826397 FN1150-S Single Base Substitution C-T INTERGENIC HET SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN1069-S.SNP.12:4828594 chr12:004828594 0 W/4828594-4828594 FN1069-S Single Base Substitution A-T INTERGENIC HOMO SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2375.SNP.12:4829383 chr12:004829383 0 W/4829383-4829383 FN2375 SNP A -> G AC=2;AN=192;BQB=0.847117;DP=4607;DP4=2210,1909,8,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.05394e-14;MQSB=0.399488;RPB=0.936336;SGB=93.2452;VDB=0.55181;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.12:4839220 chr12:004839220 0 W/4839220-4839220 FN975-S Single Base Substitution A-G INTRON HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN3316-S.SNP.12:4840790 chr12:004840790 0 W/4840790-4840790 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.862049;DP=3131;DP4=1541,1475,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000102402;MQSB=0.65972;RPB=0.803938;SGB=44.2207;VDB=0.223992;EFF=INTRON(MODIFIER||||902|LOC_Os12g09240|protein_coding|CODING|LOC_Os12g09240.1|1|1) FN852-S.SNP.12:4845945 chr12:004845945 0 W/4845945-4845945 FN852-S Single Base Substitution G-A INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2749-S.SNP.12:4848630 chr12:004848630 0 W/4848630-4848630 FN2749-S SNP G -> A AC=1;AN=200;BQB=0.218652;DP=5170;DP4=2284,2645,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.39887e-09;MQSB=0.959809;RPB=0.779123;SGB=-13.7154;VDB=0.313294;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.12:4853612 chr12:004853612 0 W/4853612-4853612 FN1537-S Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os12g09260 retrotransposon protein, putative, unclassified, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN891-S.SNP.12:4858583 chr12:004858583 0 W/4858583-4858583 FN891-S Single Base Substitution T-G INTRON HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN-76.SNP.12:4867879 chr12:004867879 0 W/4867879-4867879 FN-76 Single Base Substitution G-C INTRON HET SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN-219.SNP.12:4871756 chr12:004871756 0 W/4871756-4871756 FN-219 Single Base Substitution G-T INTRON HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN2630-S.SNP.12:4876396 chr12:004876396 0 W/4876396-4876396 FN2630-S SNP C -> A AC=1;AN=200;BQB=0.998366;DP=4870;DP4=2308,2239,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.85642e-12;MQSB=0.917613;RPB=0.993869;SGB=15.9106;VDB=0.0726046;EFF=INTERGENIC(MODIFIER||||||||||1) FN3322-S.SNP.12:4883679 chr12:004883679 0 W/4883679-4883679 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.534066;DP=3080;DP4=1670,1156,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.78697e-06;MQSB=0.75516;RPB=0.808199;SGB=35.1773;VDB=0.701071;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R197C|371|LOC_Os12g09300|protein_coding|CODING|LOC_Os12g09300.3|3|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G205|468|LOC_Os12g09300|protein_coding|CODING|LOC_Os12g09300.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G205|341|LOC_Os12g09300|protein_coding|CODING|LOC_Os12g09300.2|4|1) FN1261-S.SNP.12:4885754 chr12:004885754 0 W/4885754-4885754 FN1261-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN2320.SNP.12:4890798 chr12:004890798 0 W/4890798-4890798 FN2320 SNP A -> C AC=2;AN=192;BQB=0.146414;DP=4761;DP4=2033,2363,20,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.39006e-19;MQSB=0.778623;RPB=0.319662;SGB=114.631;VDB=0.660763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.12:4896610 chr12:004896610 0 W/4896610-4896610 FN2412 SNP A -> C AC=2;AN=200;BQB=0.267709;DP=4776;DP4=2170,2228,27,29;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.0152848;MQB=0.959055;MQSB=0.0138059;RPB=0.465918;SGB=70.4864;VDB=0.242775;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gCc|D178A|336|LOC_Os12g09330|protein_coding|CODING|LOC_Os12g09330.1|2|1) FN-40.SNP.12:4900766 chr12:004900766 0 W/4900766-4900766 FN-40 Single Base Substitution G-A INTERGENIC Homo SNo: 40, Mutant_ID: FN-40, Generation: M2, Mutations: 23, Genes: 4, Seed availability: Yes. FN1327-S.SNP.12:4906677 chr12:004906677 0 W/4906677-4906677 FN1327-S Single Base Substitution A-G INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN3543-S.SNP.12:4908015 chr12:004908015 0 W/4908015-4908015 FN3543-S SNP T -> C AC=1;AN=188;BQB=0.861931;DP=3111;DP4=1631,1379,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0665381;MQB=0.234457;MQSB=1.59715e-19;RPB=0.111615;SGB=5.5382;VDB=0.530692;EFF=INTERGENIC(MODIFIER||||||||||1) FN793-S.SNP.12:4910358 chr12:004910358 0 W/4910358-4910358 FN793-S Single Base Substitution G-A INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN2320.SNP.12:4914226 chr12:004914226 0 W/4914226-4914226 FN2320 SNP T -> A AC=2;AN=192;BQB=0.997067;DP=5682;DP4=2884,2532,24,19;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.01806e-22;MQSB=0.719916;RPB=0.87382;SGB=0.468728;VDB=0.482024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.12:4915827 chr12:004915827 0 W/4915827-4915827 FN2582-S SNP A -> C AC=2;AN=198;BQB=0.934551;DP=4389;DP4=1958,2196,13,11;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.32648e-15;MQSB=0.948542;RPB=0.907982;SGB=104.69;VDB=0.756425;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.12:4916529 chr12:004916529 0 W/4916529-4916529 FN1271-S Single Base Substitution A-C INTERGENIC HET SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2326.SNP.12:4926547 chr12:004926547 0 W/4926547-4926547 FN2326 SNP G -> A AC=1;AN=192;BQB=0.785477;DP=4911;DP4=2432,2235,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000203625;MQB=7.84813e-10;MQSB=0.435572;RPB=0.996557;SGB=39.1713;VDB=0.668638;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D107N|817|LOC_Os12g09400|protein_coding|CODING|LOC_Os12g09400.1|2|1) FN429-S.SNP.12:4928108 chr12:004928108 0 W/4928108-4928108 FN429-S Single Base Substitution C-T INTRON HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3715-S.SNP.12:4929817 chr12:004929817 0 W/4929817-4929817 FN3715-S SNP G -> T AC=1;AN=190;BQB=0.954612;DP=2748;DP4=1437,1222,17,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00800582;MQB=1.25865e-12;MQSB=0.521676;RPB=0.785087;SGB=51.7524;VDB=0.563269;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aTa|R740I|817|LOC_Os12g09400|protein_coding|CODING|LOC_Os12g09400.1|5|1) FN2137-S.SNP.12:4937880 chr12:004937880 0 W/4937880-4937880 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.748281;DP=3847;DP4=1963,1837,12,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.46903e-10;MQSB=0.937114;RPB=0.832192;SGB=-126.487;VDB=0.32442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-189.SNP.12:4942168 chr12:004942168 0 W/4942168-4942168 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3323-S.SNP.12:4947526 chr12:004947526 0 W/4947526-4947526 FN3323-S SNP T -> A AC=1;AN=184;BQB=0.880448;DP=2811;DP4=1179,1529,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.59992e-07;MQSB=0.614479;RPB=0.984171;SGB=39.699;VDB=0.61407;EFF=INTERGENIC(MODIFIER||||||||||1) FN3298-S.SNP.12:4955176 chr12:004955176 0 W/4955176-4955176 FN3298-S SNP G -> A AC=1;AN=184;BQB=0.885466;DP=3579;DP4=1917,1552,16,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.12999e-12;MQSB=0.847687;RPB=0.177437;SGB=43.4494;VDB=0.290614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.12:4955288 chr12:004955288 0 W/4955288-4955288 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.879449;DP=3839;DP4=1777,1505,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000260484;MQB=7.63931e-10;MQSB=0.734008;RPB=0.816754;SGB=60.7873;VDB=0.101045;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.12:4961825 chr12:004961825 0 W/4961825-4961825 FN545-S Single Base Substitution A-T INTERGENIC HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN-231.SNP.12:4962219 chr12:004962219 0 W/4962219-4962219 FN-231 Single Base Substitution G-A INTERGENIC HET SNo: 230, Mutant_ID: FN-231, Generation: M2, Mutations: 95, Genes: 115, Seed availability: No. FN1018-S.SNP.12:4962219 chr12:004962219 0 W/4962219-4962219 FN1018-S Single Base Substitution G-A INTERGENIC HOMO SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN1103-S.SNP.12:4962219 chr12:004962219 0 W/4962219-4962219 FN1103-S Single Base Substitution G-A INTERGENIC HOMO SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3484-S.SNP.12:4962219 chr12:004962219 0 W/4962219-4962219 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.987989;DP=3322;DP4=1373,1869,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.25507e-07;MQSB=0.0084769;RPB=0.999335;SGB=48.7425;VDB=0.0859232;EFF=INTERGENIC(MODIFIER||||||||||1) FN824-S.SNP.12:4965116 chr12:004965116 0 W/4965116-4965116 FN824-S Single Base Substitution C-A INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1046-S.SNP.12:4966880 chr12:004966880 0 W/4966880-4966880 FN1046-S Single Base Substitution T-A INTERGENIC HET SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN2404.SNP.12:4967402 chr12:004967402 0 W/4967402-4967402 FN2404 SNP T -> C AC=2;AN=200;BQB=0.926973;DP=2728;DP4=1128,1341,16,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04995e-20;MQSB=0.996737;RPB=0.640966;SGB=163.917;VDB=0.572679;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.12:4968337 chr12:004968337 0 W/4968337-4968337 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.565412;DP=4480;DP4=2209,2071,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9452e-07;MQSB=0.730918;RPB=0.946969;SGB=36.6644;VDB=0.383233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V107I|127|LOC_Os12g09470|protein_coding|CODING|LOC_Os12g09470.1|1|1) FN1467-S.SNP.12:4972251 chr12:004972251 0 W/4972251-4972251 FN1467-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g09480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN811-S.SNP.12:4972445 chr12:004972445 0 W/4972445-4972445 FN811-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g09480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN690-S.SNP.12:4974063 chr12:004974063 0 W/4974063-4974063 FN690-S Single Base Substitution C-T INTRON HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN1254-S.SNP.12:4981793 chr12:004981793 0 W/4981793-4981793 FN1254-S Single Base Substitution G-A INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN-289.SNP.12:4986628 chr12:004986628 0 W/4986628-4986628 FN-289 Single Base Substitution T-A INTRON HET SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN4155-S.SNP.12:4987171 chr12:004987171 0 W/4987171-4987171 FN4155-S SNP G -> C AC=2;AN=170;BQB=0.702923;DP=2298;DP4=1082,1057,10,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.06566e-11;MQSB=0.0244183;RPB=0.577474;SGB=83.4133;VDB=0.2211;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A133G|511|LOC_Os12g09500|protein_coding|CODING|LOC_Os12g09500.1|1|1) FN1140-S.SNP.12:4988507 chr12:004988507 0 W/4988507-4988507 FN1140-S Single Base Substitution C-A INTERGENIC HET SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN4052-S.SNP.12:4989600 chr12:004989600 0 W/4989600-4989600 FN4052-S SNP G -> C AC=1;AN=168;BQB=0.788631;DP=1568;DP4=440,1042,2,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.72457e-07;MQSB=0.481634;RPB=0.912473;SGB=22.1847;VDB=0.104933;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.12:4995043 chr12:004995043 0 W/4995043-4995043 FN732-S Single Base Substitution T-C INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN732-S.SNP.12:4995053 chr12:004995053 0 W/4995053-4995053 FN732-S Single Base Substitution C-T INTERGENIC HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN3490-S.SNP.12:4999622 chr12:004999622 0 W/4999622-4999622 FN3490-S SNP C -> G AC=1;AN=184;BQB=0.993553;DP=2916;DP4=1328,1509,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=4.03013e-07;MQSB=0.509182;RPB=0.980492;SGB=53.3568;VDB=0.297533;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.12:5001062 chr12:005001062 0 W/5001062-5001062 FN952-S Single Base Substitution T-C INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2780-S.SNP.12:5004699 chr12:005004699 0 W/5004699-5004699 FN2780-S SNP T -> A AC=2;AN=198;BQB=0.996962;DP=4196;DP4=1991,1978,27,28;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.34373e-31;MQSB=0.999073;RPB=0.464712;SGB=247.139;VDB=0.804381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R712W|1100|LOC_Os12g09530|protein_coding|CODING|LOC_Os12g09530.1|2|1) FN1396-S.SNP.12:5009800 chr12:005009800 0 W/5009800-5009800 FN1396-S Single Base Substitution G-A INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2780-S.SNP.12:5010864 chr12:005010864 0 W/5010864-5010864 FN2780-S SNP G -> A AC=2;AN=198;BQB=0.474373;DP=4133;DP4=1973,1895,28,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.89682e-26;MQSB=0.979279;RPB=0.926268;SGB=114.983;VDB=0.966613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1409-S.SNP.12:5011582 chr12:005011582 0 W/5011582-5011582 FN1409-S Single Base Substitution G-A INTERGENIC HET SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN-353.SNP.12:5011983 chr12:005011983 0 W/5011983-5011983 FN-353 Single Base Substitution T-A INTERGENIC HOMO SNo: 343, Mutant_ID: FN-353, Generation: M2, Mutations: 58, Genes: 32, Seed availability: Yes. FN3699-S.SNP.12:5013298 chr12:005013298 0 W/5013298-5013298 FN3699-S SNP A -> G AC=2;AN=190;BQB=0.996409;DP=2715;DP4=1097,1453,15,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.46849e-16;MQSB=0.97327;RPB=0.712299;SGB=114.286;VDB=0.388973;EFF=INTERGENIC(MODIFIER||||||||||1) FN2397.SNP.12:5013490 chr12:005013490 0 W/5013490-5013490 FN2397 SNP G -> A AC=1;AN=200;BQB=0.995594;DP=4476;DP4=1854,2328,11,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.45984e-16;MQSB=0.961566;RPB=0.892095;SGB=79.9264;VDB=0.879331;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.12:5013862 chr12:005013862 0 W/5013862-5013862 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.996981;DP=4795;DP4=2360,2214,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99274e-10;MQSB=0.642115;RPB=0.766435;SGB=47.4799;VDB=0.126824;EFF=UTR_3_PRIME(MODIFIER||204||518|LOC_Os12g09540|protein_coding|CODING|LOC_Os12g09540.1|5|1),UTR_3_PRIME(MODIFIER||204||517|LOC_Os12g09540|protein_coding|CODING|LOC_Os12g09540.2|5|1) FN1136-S.SNP.12:5015496 chr12:005015496 0 W/5015496-5015496 FN1136-S Single Base Substitution C-T INTRON HET SNo: 1003, Mutant_ID: FN1136-S, Generation: M2, Mutations: 59, Genes: 49, Seed availability: No. FN2411.SNP.12:5017858 chr12:005017858 0 W/5017858-5017858 FN2411 SNP T -> A AC=1;AN=200;BQB=0.615785;DP=4228;DP4=2168,1715,18,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.61796e-20;MQSB=0.999048;RPB=0.469325;SGB=-42.4225;VDB=0.737659;EFF=INTRON(MODIFIER||||518|LOC_Os12g09540|protein_coding|CODING|LOC_Os12g09540.1|1|1),INTRON(MODIFIER||||517|LOC_Os12g09540|protein_coding|CODING|LOC_Os12g09540.2|1|1) FN2662-S.SNP.12:5023098 chr12:005023098 0 W/5023098-5023098 FN2662-S SNP G -> T AC=1;AN=200;BQB=0.470557;DP=4793;DP4=2101,2395,6,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44626e-05;MQSB=0.973546;RPB=0.67451;SGB=31.2392;VDB=0.88126;EFF=UTR_5_PRIME(MODIFIER||321||105|LOC_Os12g09550|protein_coding|CODING|LOC_Os12g09550.1|2|1),UTR_5_PRIME(MODIFIER||321||105|LOC_Os12g09550|protein_coding|CODING|LOC_Os12g09550.2|2|1) FN2096-S.SNP.12:5032231 chr12:005032231 0 W/5032231-5032231 FN2096-S SNP A -> T AC=1;AN=168;BQB=0.0753163;DP=3477;DP4=1776,1657,13,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.43631e-10;MQSB=0.999908;RPB=0.420536;SGB=-126.487;VDB=0.327818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Tac|N136Y|785|LOC_Os12g09570|protein_coding|CODING|LOC_Os12g09570.2|3|1) FN1420-S.SNP.12:5052223 chr12:005052223 0 W/5052223-5052223 FN1420-S Single Base Substitution G-T INTERGENIC HET SNo: 1195, Mutant_ID: FN1420-S, Generation: M2, Mutations: 61, Genes: 13, Seed availability: Yes. FN3514-S.SNP.12:5053394 chr12:005053394 0 W/5053394-5053394 FN3514-S SNP A -> T AC=1;AN=188;BQB=0.696109;DP=2364;DP4=1010,1294,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.94944e-05;MQSB=0.893189;RPB=0.792707;SGB=28.8977;VDB=0.0641964;EFF=INTERGENIC(MODIFIER||||||||||1) FN972-S.SNP.12:5054723 chr12:005054723 0 W/5054723-5054723 FN972-S Single Base Substitution T-C INTERGENIC HOMO SNo: 876, Mutant_ID: FN972-S, Generation: M2, Mutations: 43, Genes: 8, Seed availability: Yes. FN1625-S.SNP.12:5066445 chr12:005066445 0 W/5066445-5066445 FN1625-S Single Base Substitution C-T SPLICE_SITE_REGION HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.12:5066445 chr12:005066445 0 W/5066445-5066445 FN1626-S SNP C -> T AC=1;AN=188;BQB=0.0122408;DP=4265;DP4=2327,1886,22,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.00054e-09;MQSB=0.993711;RPB=0.0370359;SGB=-115.921;VDB=0.0883717;EFF=SPLICE_SITE_REGION(LOW||||415|LOC_Os12g09610|protein_coding|CODING|LOC_Os12g09610.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D286|415|LOC_Os12g09610|protein_coding|CODING|LOC_Os12g09610.1|8|1) FN1529-S.SNP.12:5067184 chr12:005067184 0 W/5067184-5067184 FN1529-S Single Base Substitution G-C INTRON Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN3596-S.SNP.12:5073169 chr12:005073169 0 W/5073169-5073169 FN3596-S SNP A -> G AC=1;AN=188;BQB=0.77246;DP=3680;DP4=2117,1388,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.05924e-09;MQSB=0.967148;RPB=0.191503;SGB=8.62479;VDB=0.373679;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.12:5080653 chr12:005080653 0 W/5080653-5080653 FN484-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g09640 protein phosphatase 2C, putative, expressed SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN3725-S.SNP.12:5080823 chr12:005080823 0 W/5080823-5080823 FN3725-S SNP C -> A AC=1;AN=190;BQB=0.844276;DP=2538;DP4=1230,1208,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.46101e-07;MQSB=0.979539;RPB=0.640307;SGB=44.5415;VDB=0.440607;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tTc|C9F|421|LOC_Os12g09640|protein_coding|CODING|LOC_Os12g09640.1|1|1) FN-365.SNP.12:5090319 chr12:005090319 0 W/5090319-5090319 FN-365 Single Base Substitution G-A INTERGENIC HET SNo: 354, Mutant_ID: FN-365, Generation: M2, Mutations: 36, Genes: 54, Seed availability: Yes. FN4139-S.SNP.12:5108570 chr12:005108570 0 W/5108570-5108570 FN4139-S SNP C -> T AC=1;AN=170;BQB=0.60588;DP=2384;DP4=1201,1096,9,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.55274e-09;MQSB=0.793792;RPB=0.824046;SGB=78.9707;VDB=0.983239;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G116|446|LOC_Os12g09680|protein_coding|CODING|LOC_Os12g09680.1|1|1) FN1379-S.SNP.12:5109676 chr12:005109676 0 W/5109676-5109676 FN1379-S Single Base Substitution T-A INTRON HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2612-S.SNP.12:5115255 chr12:005115255 0 W/5115255-5115255 FN2612-S SNP A -> T AC=1;AN=198;BQB=0.604882;DP=4227;DP4=1942,2092,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000236574;MQB=5.08872e-14;MQSB=0.997903;RPB=0.981658;SGB=95.5;VDB=0.260502;EFF=INTERGENIC(MODIFIER||||||||||1) FN1249-S.SNP.12:5119846 chr12:005119846 0 W/5119846-5119846 FN1249-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2199-S.SNP.12:5131714 chr12:005131714 0 W/5131714-5131714 FN2199-S SNP C -> G AC=1;AN=190;BQB=0.202325;DP=4913;DP4=2501,2127,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.58242e-09;MQSB=0.993668;RPB=0.975176;SGB=-13.7759;VDB=0.833073;EFF=INTERGENIC(MODIFIER||||||||||1) FN2484.SNP.12:5136007 chr12:005136007 0 W/5136007-5136007 FN2484 SNP G -> A AC=1;AN=200;BQB=0.981868;DP=5078;DP4=2576,2169,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78951e-09;MQSB=0.899036;RPB=0.861452;SGB=40.2696;VDB=0.241147;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.12:5145823 chr12:005145823 0 W/5145823-5145823 FN4165-S SNP G -> A AC=1;AN=170;BQB=0.932749;DP=2484;DP4=1252,1131,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.04885e-09;MQSB=0.999361;RPB=0.679496;SGB=61.2001;VDB=0.554146;EFF=INTRON(MODIFIER||||910|LOC_Os12g09739|protein_coding|CODING|LOC_Os12g09739.1|3|1) FN2682-S.SNP.12:5152579 chr12:005152579 0 W/5152579-5152579 FN2682-S SNP T -> C AC=1;AN=200;BQB=0.999452;DP=4770;DP4=2432,2192,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.55954e-12;MQSB=0.989775;RPB=0.974151;SGB=58.2954;VDB=0.587395;EFF=INTERGENIC(MODIFIER||||||||||1) FN571-S.SNP.12:5166685 chr12:005166685 0 W/5166685-5166685 FN571-S Single Base Substitution A-T INTERGENIC HOMO SNo: 562, Mutant_ID: FN571-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN3368-S.SNP.12:5171961 chr12:005171961 0 W/5171961-5171961 FN3368-S SNP T -> C AC=1;AN=184;BQB=0.569142;DP=3432;DP4=1725,1474,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.29859e-08;MQSB=0.996273;RPB=0.977324;SGB=-12.6269;VDB=0.0802659;EFF=INTERGENIC(MODIFIER||||||||||1) W138-2-1.SNP.12:5181001 chr12:005181001 0 W/5181001-5181001 W138-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN-116.SNP.12:5183125 chr12:005183125 0 W/5183125-5183125 FN-116 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g09780 expressed protein SNo: 116, Mutant_ID: FN-116, Generation: M2, Mutations: 29, Genes: 6, Seed availability: Yes. FN1429-S.SNP.12:5186360 chr12:005186360 0 W/5186360-5186360 FN1429-S Single Base Substitution C-A INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-379.SNP.12:5187843 chr12:005187843 0 W/5187843-5187843 FN-379 Single Base Substitution C-A INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN980-S.SNP.12:5192043 chr12:005192043 0 W/5192043-5192043 FN980-S Single Base Substitution C-T INTRON HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3479-S.SNP.12:5194413 chr12:005194413 0 W/5194413-5194413 FN3479-S SNP C -> T AC=1;AN=184;BQB=0.766478;DP=3924;DP4=1847,1990,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.26777e-10;MQSB=0.998304;RPB=0.473213;SGB=89.4385;VDB=0.841231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A943V|1412|LOC_Os12g09800|protein_coding|CODING|LOC_Os12g09800.1|3|1) FN3631-S.SNP.12:5202279 chr12:005202279 0 W/5202279-5202279 FN3631-S SNP C -> T AC=1;AN=190;BQB=0.768259;DP=2649;DP4=1284,1215,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.80579e-05;MQSB=0.403837;RPB=0.939682;SGB=44.5415;VDB=0.152121;EFF=INTERGENIC(MODIFIER||||||||||1) FN2671-S.SNP.12:5208074 chr12:005208074 0 W/5208074-5208074 FN2671-S SNP A -> G AC=2;AN=200;BQB=0.809458;DP=4823;DP4=2283,2241,12,17;HOB=0.0198;ICB=0.495051;MQ=32;MQ0F=0.101804;MQB=0.632742;MQSB=0.000184281;RPB=0.950259;SGB=94.3471;VDB=0.453527;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.12:5210515 chr12:005210515 0 W/5210515-5210515 FN3535-S SNP G -> A AC=2;AN=188;BQB=0.999995;DP=4175;DP4=1934,2147,20,15;HOB=0.0210502;ICB=0.494738;MQ=43;MQ0F=0.0189222;MQB=0.00379538;MQSB=0.220448;RPB=0.289423;SGB=153.475;VDB=0.381205;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A382T|1512|LOC_Os12g09840|protein_coding|CODING|LOC_Os12g09840.1|2|1) FN3537-S.SNP.12:5210562 chr12:005210562 0 W/5210562-5210562 FN3537-S SNP G -> A AC=1;AN=188;BQB=0.944879;DP=4136;DP4=1984,2072,10,13;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.0157157;MQB=0.277681;MQSB=0.000432287;RPB=0.880013;SGB=71.4172;VDB=0.988634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M397I|1512|LOC_Os12g09840|protein_coding|CODING|LOC_Os12g09840.1|2|1) FN2234-S.SNP.12:5210853 chr12:005210853 0 W/5210853-5210853 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.925587;DP=4123;DP4=2078,1798,9,13;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0480233;MQB=0.98634;MQSB=0;RPB=0.171771;SGB=68.0854;VDB=0.731142;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A470|1512|LOC_Os12g09840|protein_coding|CODING|LOC_Os12g09840.1|3|1) FN996-S.SNP.12:5217340 chr12:005217340 0 W/5217340-5217340 FN996-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g09850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 899, Mutant_ID: FN996-S, Generation: M2, Mutations: 51, Genes: 14, Seed availability: Yes. FN2599-S.SNP.12:5218425 chr12:005218425 0 W/5218425-5218425 FN2599-S SNP G -> A AC=1;AN=198;BQB=0.930876;DP=3684;DP4=1676,1754,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.00108578;MQB=1.67336e-07;MQSB=0.994914;RPB=0.643333;SGB=18.9639;VDB=0.697825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.12:5239669 chr12:005239669 0 W/5239669-5239669 FN2581-S SNP G -> C AC=1;AN=198;BQB=0.907383;DP=4052;DP4=1850,1959,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.77619e-08;MQSB=0.927768;RPB=0.664342;SGB=24.1541;VDB=0.525709;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.12:5246041 chr12:005246041 0 W/5246041-5246041 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.999857;DP=2573;DP4=1211,1277,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.0474155;MQB=0.000663722;MQSB=6.93542e-12;RPB=0.983753;SGB=24.5502;VDB=0.570414;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.12:5255877 chr12:005255877 0 W/5255877-5255877 FN1122-S Single Base Substitution G-C INTRON HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN3626-S.SNP.12:5260562 chr12:005260562 0 W/5260562-5260562 FN3626-S SNP T -> A AC=1;AN=190;BQB=0.173954;DP=3353;DP4=1752,1380,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000253822;MQSB=0.941031;RPB=0.409473;SGB=1.00337;VDB=0.706775;EFF=INTERGENIC(MODIFIER||||||||||1) FN-342.SNP.12:5263791 chr12:005263791 0 W/5263791-5263791 FN-342 Single Base Substitution C-G INTERGENIC HOMO SNo: 333, Mutant_ID: FN-342, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN3760-S.SNP.12:5269385 chr12:005269385 0 W/5269385-5269385 FN3760-S SNP G -> A AC=1;AN=190;BQB=0.990293;DP=2904;DP4=1456,1308,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28577e-08;MQSB=0.840336;RPB=0.447153;SGB=71.8647;VDB=0.838942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.12:5273152 chr12:005273152 0 W/5273152-5273152 FN2476 SNP G -> A AC=2;AN=200;BQB=0.810868;DP=4594;DP4=2115,2064,15,30;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000217675;MQB=5.55368e-22;MQSB=0.160178;RPB=0.976305;SGB=-95.971;VDB=0.4561;EFF=INTERGENIC(MODIFIER||||||||||1) FN2476.SNP.12:5273153 chr12:005273153 0 W/5273153-5273153 FN2476 SNP T -> A AC=2;AN=200;BQB=0.915228;DP=4581;DP4=2130,2169,14,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000218293;MQB=1.00222e-20;MQSB=0.261821;RPB=0.725063;SGB=137.609;VDB=0.360798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3917-S.SNP.12:5278134 chr12:005278134 0 W/5278134-5278134 FN3917-S SNP C -> G AC=2;AN=158;BQB=0.809653;DP=2421;DP4=1018,1306,10,10;HOB=0.024996;ICB=0.493752;MQ=26;MQ0F=0.190004;MQB=0.950734;MQSB=1.48009e-33;RPB=0.780366;SGB=33.2965;VDB=0.705334;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.12:5279232 chr12:005279232 0 W/5279232-5279232 FN_543-2-6 Single Base Substitution T-G HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. 704-1-1.SNP.12:5286638 chr12:005286638 0 W/5286638-5286638 704-1-1 Single Base Substitution C-G INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. FN1270-S.SNP.12:5288221 chr12:005288221 0 W/5288221-5288221 FN1270-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3983-S.SNP.12:5289618 chr12:005289618 0 W/5289618-5289618 FN3983-S SNP C -> G AC=1;AN=168;BQB=0.929581;DP=3263;DP4=1729,1436,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.696e-08;MQSB=0.803787;RPB=0.145733;SGB=47.7421;VDB=0.221633;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S46W|1287|LOC_Os12g09990|protein_coding|CODING|LOC_Os12g09990.1|2|1) FN4108-S.SNP.12:5290487 chr12:005290487 0 W/5290487-5290487 FN4108-S SNP G -> T AC=2;AN=182;BQB=0.990626;DP=3363;DP4=1653,1624,15,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.53912e-19;MQSB=0.948085;RPB=0.93684;SGB=95.3123;VDB=0.705156;EFF=INTRON(MODIFIER||||1287|LOC_Os12g09990|protein_coding|CODING|LOC_Os12g09990.1|2|1) FN2680-S.SNP.12:5290757 chr12:005290757 0 W/5290757-5290757 FN2680-S SNP G -> A AC=1;AN=200;BQB=0.847795;DP=4743;DP4=2240,2253,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27986e-10;MQSB=0.99761;RPB=0.987149;SGB=26.8797;VDB=0.0639986;EFF=INTRON(MODIFIER||||1287|LOC_Os12g09990|protein_coding|CODING|LOC_Os12g09990.1|2|1) FN959-S.SNP.12:5296102 chr12:005296102 0 W/5296102-5296102 FN959-S Single Base Substitution C-A INTRON HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2751-S.SNP.12:5300166 chr12:005300166 0 W/5300166-5300166 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.442965;DP=5012;DP4=2508,2224,10,15;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.0595e-10;MQSB=0.946106;RPB=0.935598;SGB=-8.87404;VDB=0.621855;EFF=INTERGENIC(MODIFIER||||||||||1) FN3768-S.SNP.12:5305303 chr12:005305303 0 W/5305303-5305303 FN3768-S SNP G -> A AC=1;AN=190;BQB=0.759802;DP=3221;DP4=1471,1596,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.18984e-12;MQSB=0.999416;RPB=0.670218;SGB=75.1932;VDB=0.983715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.12:5307178 chr12:005307178 0 W/5307178-5307178 FN2195-S SNP C -> T AC=1;AN=190;BQB=0.0970793;DP=4342;DP4=1894,2179,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000123807;MQSB=0.872238;RPB=0.705811;SGB=13.4442;VDB=0.0766076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.12:5308018 chr12:005308018 0 W/5308018-5308018 FN-350 Single Base Substitution G-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN-175.SNP.12:5309297 chr12:005309297 0 W/5309297-5309297 FN-175 Single Base Substitution A-C INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN533-S.SNP.12:5314326 chr12:005314326 0 W/5314326-5314326 FN533-S Single Base Substitution C-T INTRON HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2185-S.SNP.12:5316613 chr12:005316613 0 W/5316613-5316613 FN2185-S SNP C -> A AC=1;AN=190;BQB=0.9621;DP=4712;DP4=2105,2283,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.80419e-14;MQSB=0.263671;RPB=0.582198;SGB=117.403;VDB=0.0409105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2553-S.SNP.12:5317967 chr12:005317967 0 W/5317967-5317967 FN2553-S SNP C -> T AC=1;AN=198;BQB=0.917796;DP=3455;DP4=1636,1558,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0437048;MQB=0.784441;MQSB=0;RPB=0.693563;SGB=35.7638;VDB=0.799646;EFF=INTRON(MODIFIER||||337|LOC_Os12g10040|protein_coding|CODING|LOC_Os12g10040.1|1|1) FN4011-S.SNP.12:5321946 chr12:005321946 0 W/5321946-5321946 FN4011-S SNP T -> A AC=1;AN=168;BQB=0.89094;DP=3604;DP4=1891,1441,17,10;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.132908;MQB=0.102091;MQSB=4.58698e-06;RPB=0.998623;SGB=82.7794;VDB=0.946822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.12:5322036 chr12:005322036 0 W/5322036-5322036 FN3570-S SNP A -> T AC=1;AN=190;BQB=0.93762;DP=4206;DP4=2537,1502,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=26;MQ0F=0.168093;MQB=0.298864;MQSB=6.65681e-13;RPB=0.918231;SGB=49.0954;VDB=0.80797;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.12:5333130 chr12:005333130 0 W/5333130-5333130 FN825-S Single Base Substitution C-T INTRON HOMO SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN2612-S.SNP.12:5337007 chr12:005337007 0 W/5337007-5337007 FN2612-S SNP G -> T AC=1;AN=198;BQB=0.948634;DP=3851;DP4=1796,1742,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000259673;MQB=1.55395e-07;MQSB=0.915989;RPB=0.72851;SGB=43.7442;VDB=0.893759;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcA|A44|120|LOC_Os12g10080|protein_coding|CODING|LOC_Os12g10080.1|2|1) FN3933-S.SNP.12:5337979 chr12:005337979 0 W/5337979-5337979 FN3933-S SNP C -> T AC=1;AN=158;BQB=0.918686;DP=2535;DP4=1040,1376,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.19382e-09;MQSB=0.971456;RPB=0.914657;SGB=44.1818;VDB=0.982018;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.12:5339447 chr12:005339447 0 W/5339447-5339447 FN1256-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN3531-S.SNP.12:5351555 chr12:005351555 0 W/5351555-5351555 FN3531-S SNP C -> T AC=2;AN=188;BQB=0.98528;DP=3152;DP4=1777,1281,11,7;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0656726;MQB=0.185919;MQSB=6.44126e-07;RPB=0.391653;SGB=76.2387;VDB=0.0735894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1210-S.SNP.12:5356144 chr12:005356144 0 W/5356144-5356144 FN1210-S Single Base Substitution G-A INTERGENIC HET SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN456-S.SNP.12:5360423 chr12:005360423 0 W/5360423-5360423 FN456-S Single Base Substitution G-A INTERGENIC HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN3631-S.SNP.12:5366536 chr12:005366536 0 W/5366536-5366536 FN3631-S SNP A -> G AC=1;AN=190;BQB=1;DP=2614;DP4=1223,1294,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24104e-05;MQSB=0.971927;RPB=0.973322;SGB=25.439;VDB=0.359729;EFF=INTERGENIC(MODIFIER||||||||||1) FN-95.SNP.12:5370618 chr12:005370618 0 W/5370618-5370618 FN-95 Single Base Substitution T-A INTERGENIC HOMO SNo: 95, Mutant_ID: FN-95, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1220-S.SNP.12:5370618 chr12:005370618 0 W/5370618-5370618 FN1220-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1048, Mutant_ID: FN1220-S, Generation: M2, Mutations: 59, Genes: 11, Seed availability: Yes. FN1282-S.SNP.12:5372592 chr12:005372592 0 W/5372592-5372592 FN1282-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2331.SNP.12:5373303 chr12:005373303 0 W/5373303-5373303 FN2331 SNP C -> T AC=1;AN=192;BQB=0.553658;DP=4881;DP4=2323,2264,11,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000204876;MQB=3.30538e-12;MQSB=0.996198;RPB=0.145212;SGB=-11.3826;VDB=0.376378;EFF=INTERGENIC(MODIFIER||||||||||1) W246-5-1.SNP.12:5376117 chr12:005376117 0 W/5376117-5376117 W246-5-1 Single Base Substitution C-T INTERGENIC HET SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3846-S.SNP.12:5390147 chr12:005390147 0 W/5390147-5390147 FN3846-S SNP C -> T AC=1;AN=190;BQB=0.980359;DP=3123;DP4=1559,1399,3,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.65996e-07;MQSB=0.999313;RPB=0.737788;SGB=58.2031;VDB=0.0759712;EFF=INTRON(MODIFIER||||671|LOC_Os12g10190|protein_coding|CODING|LOC_Os12g10190.1|5|1),INTRON(MODIFIER||||422|LOC_Os12g10190|protein_coding|CODING|LOC_Os12g10190.2|4|1) FN853-S.SNP.12:5391558 chr12:005391558 0 W/5391558-5391558 FN853-S Single Base Substitution C-G UTR_3_PRIME HOMO SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN3853-S.SNP.12:5396191 chr12:005396191 0 W/5396191-5396191 FN3853-S SNP C -> T AC=2;AN=158;BQB=0.86372;DP=2356;DP4=1154,1112,9,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=9.71408e-10;MQSB=0.953331;RPB=0.976635;SGB=86.3921;VDB=0.912062;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R47*|89|LOC_Os12g10210|protein_coding|CODING|LOC_Os12g10210.1|2|1) FN2467.SNP.12:5399582 chr12:005399582 0 W/5399582-5399582 FN2467 SNP C -> T AC=2;AN=200;BQB=0.0907055;DP=4624;DP4=2305,1955,32,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.95184e-28;MQSB=0.880751;RPB=0.13285;SGB=-48.7398;VDB=0.280901;EFF=INTRON(MODIFIER||||100|LOC_Os12g10220|protein_coding|CODING|LOC_Os12g10220.1|1|1) FN2260-S.SNP.12:5401895 chr12:005401895 0 W/5401895-5401895 FN2260-S SNP C -> A AC=1;AN=190;BQB=0.716886;DP=4468;DP4=1922,2097,13,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.41558e-09;MQSB=0.318008;RPB=0.418809;SGB=8.77275;VDB=0.524259;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G101V|127|LOC_Os12g10230|protein_coding|CODING|LOC_Os12g10230.1|1|1) FN819-S.SNP.12:5405699 chr12:005405699 0 W/5405699-5405699 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN488-S.SNP.12:5415173 chr12:005415173 0 W/5415173-5415173 FN488-S Single Base Substitution T-C INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3482-S.SNP.12:5428751 chr12:005428751 0 W/5428751-5428751 FN3482-S SNP A -> T AC=1;AN=184;BQB=0.998447;DP=2540;DP4=1202,1238,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00629921;MQB=0.00372509;MQSB=4.746e-05;RPB=0.995533;SGB=18.2315;VDB=0.0861673;EFF=INTERGENIC(MODIFIER||||||||||1) FN3565-S.SNP.12:5437406 chr12:005437406 0 W/5437406-5437406 FN3565-S SNP G -> T AC=2;AN=188;BQB=0.366254;DP=3257;DP4=1430,1708,23,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.21584e-19;MQSB=0.998847;RPB=0.593381;SGB=171.648;VDB=0.987734;EFF=INTRON(MODIFIER||||329|LOC_Os12g10280|protein_coding|CODING|LOC_Os12g10280.1|1|1) FN1754-S.SNP.12:5446201 chr12:005446201 0 W/5446201-5446201 FN1754-S SNP G -> A AC=1;AN=188;BQB=0.0178628;DP=3751;DP4=1794,1921,9,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.87885e-06;MQSB=0.967199;RPB=0.37228;SGB=-153.343;VDB=0.261339;EFF=INTRON(MODIFIER||||676|LOC_Os12g10310|protein_coding|CODING|LOC_Os12g10310.1|3|1) FN1229-S.SNP.12:5448730 chr12:005448730 0 W/5448730-5448730 FN1229-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN4203-S.SNP.12:5449110 chr12:005449110 0 W/5449110-5449110 FN4203-S SNP C -> T AC=1;AN=170;BQB=0.965833;DP=2508;DP4=1130,1308,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.68093e-06;MQSB=0.951864;RPB=0.850528;SGB=43.4296;VDB=0.489965;EFF=INTERGENIC(MODIFIER||||||||||1) FN-370.SNP.12:5450403 chr12:005450403 0 W/5450403-5450403 FN-370 Single Base Substitution C-T INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-370.SNP.12:5450404 chr12:005450404 0 W/5450404-5450404 FN-370 Single Base Substitution C-T INTERGENIC HOMO SNo: 359, Mutant_ID: FN-370, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN2359.SNP.12:5451795 chr12:005451795 0 W/5451795-5451795 FN2359 SNP T -> C AC=2;AN=192;BQB=0.963362;DP=4810;DP4=2585,1854,26,16;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.0002079;MQB=2.17861e-17;MQSB=0.943639;RPB=0.578693;SGB=93.0226;VDB=0.782705;EFF=INTERGENIC(MODIFIER||||||||||1) FN4229-S.SNP.12:5453661 chr12:005453661 0 W/5453661-5453661 FN4229-S SNP C -> A AC=1;AN=170;BQB=0.954937;DP=2584;DP4=1151,1332,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.5942e-08;MQSB=0.88401;RPB=0.611036;SGB=31.4354;VDB=0.244287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-222.SNP.12:5456273 chr12:005456273 0 W/5456273-5456273 FN-222 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN549-S.SNP.12:5459543 chr12:005459543 0 W/5459543-5459543 FN549-S Single Base Substitution A-T INTERGENIC HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN3942-S.SNP.12:5463181 chr12:005463181 0 W/5463181-5463181 FN3942-S SNP T -> G AC=2;AN=168;BQB=0.859494;DP=2441;DP4=1344,840,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.90033e-10;MQSB=0.981475;RPB=0.746104;SGB=17.068;VDB=0.857834;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.12:5464831 chr12:005464831 0 W/5464831-5464831 FN566-S Single Base Substitution T-A INTERGENIC HET SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN3420-S.SNP.12:5468848 chr12:005468848 0 W/5468848-5468848 FN3420-S SNP C -> T AC=1;AN=184;BQB=0.676707;DP=2444;DP4=1164,1198,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.22998e-05;MQSB=0.924242;RPB=0.748641;SGB=25.1826;VDB=0.353276;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.12:5471688 chr12:005471688 0 W/5471688-5471688 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2534-S.SNP.12:5479710 chr12:005479710 0 W/5479710-5479710 FN2534-S SNP G -> C AC=1;AN=198;BQB=0.70216;DP=4096;DP4=1850,1965,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.44107e-09;MQSB=0.799798;RPB=0.937668;SGB=31.9395;VDB=0.80483;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN-210 Single Base Substitution A-T INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN-335.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN-335 Single Base Substitution A-T INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1097-S.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1720-S.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN1720-S SNP A -> T AC=2;AN=188;BQB=0.104661;DP=3832;DP4=2278,1481,20,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.70714e-15;MQSB=0.443241;RPB=0.199611;SGB=-6.30704;VDB=0.0209517;EFF=INTERGENIC(MODIFIER||||||||||1) FN2376.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN2376 SNP A -> T AC=2;AN=192;BQB=0.25039;DP=5100;DP4=2596,2295,13,12;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000196078;MQB=2.18143e-11;MQSB=0.0231913;RPB=0.625101;SGB=108.547;VDB=0.594321;EFF=INTERGENIC(MODIFIER||||||||||1) FN597-S.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN597-S Single Base Substitution A-T INTERGENIC HOMO SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN628-S.SNP.12:5480418 chr12:005480418 0 W/5480418-5480418 FN628-S Single Base Substitution A-T INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4066-S.SNP.12:5481573 chr12:005481573 0 W/5481573-5481573 FN4066-S SNP A -> T AC=1;AN=168;BQB=0.46641;DP=2479;DP4=968,1306,6,13;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=4.86587e-08;MQSB=0.991226;RPB=0.604303;SGB=-38.3665;VDB=0.248184;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.12:5488935 chr12:005488935 0 W/5488935-5488935 FN774-S Single Base Substitution C-T INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN2646-S.SNP.12:5494573 chr12:005494573 0 W/5494573-5494573 FN2646-S SNP G -> A AC=2;AN=200;BQB=0.736535;DP=4662;DP4=2022,2305,23,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.62027e-28;MQSB=0.980816;RPB=0.172465;SGB=107.64;VDB=0.444346;EFF=INTERGENIC(MODIFIER||||||||||1) FN424-S.SNP.12:5502979 chr12:005502979 0 W/5502979-5502979 FN424-S Single Base Substitution C-T INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN2498.SNP.12:5505293 chr12:005505293 0 W/5505293-5505293 FN2498 SNP G -> C AC=1;AN=200;BQB=0.0799582;DP=4940;DP4=2317,2386,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99466e-07;MQSB=0.924581;RPB=0.950544;SGB=40.2696;VDB=0.494175;EFF=INTRON(MODIFIER||||527|LOC_Os12g10400|protein_coding|CODING|LOC_Os12g10400.1|3|1) FN981-S.SNP.12:5505792 chr12:005505792 0 W/5505792-5505792 FN981-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 885, Mutant_ID: FN981-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN_949-1.SNP.12:5506967 chr12:005506967 0 W/5506967-5506967 FN_949-1 Single Base Substitution G-A HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1140-S.SNP.12:5509932 chr12:005509932 0 W/5509932-5509932 FN1140-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g10410 NB-ARC/LRR disease resistance protein, putative, expressed SNo: 1004, Mutant_ID: FN1140-S, Generation: M2, Mutations: 73, Genes: 20, Seed availability: Yes. FN-290.SNP.12:5511171 chr12:005511171 0 W/5511171-5511171 FN-290 Single Base Substitution G-T INTRON HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN2456.SNP.12:5511820 chr12:005511820 0 W/5511820-5511820 FN2456 SNP C -> T AC=1;AN=200;BQB=0.287983;DP=3818;DP4=1728,1763,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000120411;MQSB=0.988579;RPB=0.715429;SGB=40.2696;VDB=0.892999;EFF=INTRON(MODIFIER||||939|LOC_Os12g10410|protein_coding|CODING|LOC_Os12g10410.1|1|1) FN1666-S.SNP.12:5516099 chr12:005516099 0 W/5516099-5516099 FN1666-S SNP A -> T AC=2;AN=188;BQB=0.781027;DP=3587;DP4=1841,1702,14,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.42978e-13;MQSB=0.992929;RPB=0.944596;SGB=82.0471;VDB=0.964549;EFF=INTERGENIC(MODIFIER||||||||||1) FN-90.SNP.12:5527722 chr12:005527722 0 W/5527722-5527722 FN-90 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g10430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 90, Mutant_ID: FN-90, Generation: M2, Mutations: 32, Genes: 10, Seed availability: Yes. FN2740-S.SNP.12:5529807 chr12:005529807 0 W/5529807-5529807 FN2740-S SNP A -> T AC=2;AN=200;BQB=0.860871;DP=5050;DP4=2371,2386,26,26;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.50214e-20;MQSB=0.690536;RPB=0.999922;SGB=120.666;VDB=0.620718;EFF=INTERGENIC(MODIFIER||||||||||1) FN2204-S.SNP.12:5533921 chr12:005533921 0 W/5533921-5533921 FN2204-S SNP T -> C AC=2;AN=190;BQB=0.870835;DP=5141;DP4=2284,2457,22,32;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000778059;MQB=6.95433e-25;MQSB=0.637562;RPB=0.461924;SGB=181.81;VDB=0.592222;EFF=INTRON(MODIFIER||||865|LOC_Os12g10440|protein_coding|CODING|LOC_Os12g10440.1|3|1) FN2713-S.SNP.12:5544149 chr12:005544149 0 W/5544149-5544149 FN2713-S SNP A -> T AC=1;AN=200;BQB=0.230375;DP=4646;DP4=2131,2237,16,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.92394e-14;MQSB=0.94087;RPB=0.209782;SGB=52.9314;VDB=0.264998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaT/aaA|N357K|488|LOC_Os12g10460|protein_coding|CODING|LOC_Os12g10460.1|2|1) FN_814-7-1.SNP.12:5551351 chr12:005551351 0 W/5551351-5551351 FN_814-7-1 Single Base Substitution A-T Homo SNo: 1490, Mutant_ID: FN_814-7-1, Generation: M3, Mutations: 67, Genes: 97, Seed availability: Yes. FN-303.SNP.12:5557011 chr12:005557011 0 W/5557011-5557011 FN-303 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN4020-S.SNP.12:5557247 chr12:005557247 0 W/5557247-5557247 FN4020-S SNP A -> G AC=1;AN=168;BQB=0.994067;DP=2787;DP4=1324,1314,7,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.00358809;MQB=3.47697e-06;MQSB=0.223089;RPB=0.763125;SGB=78.7577;VDB=0.59426;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.12:5564972 chr12:005564972 0 W/5564972-5564972 FN874-S Single Base Substitution T-C INTERGENIC HOMO SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2212-S.SNP.12:5566626 chr12:005566626 0 W/5566626-5566626 FN2212-S SNP G -> T AC=2;AN=190;BQB=0.97986;DP=4933;DP4=2326,2136,46,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.12864e-38;MQSB=0.982425;RPB=0.934099;SGB=264.127;VDB=0.751247;EFF=INTERGENIC(MODIFIER||||||||||1) FN2180-S.SNP.12:5569034 chr12:005569034 0 W/5569034-5569034 FN2180-S SNP A -> T AC=2;AN=190;BQB=0.0449816;DP=3065;DP4=928,1128,27,17;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=8.84859e-10;MQSB=0.297396;RPB=0.0220096;SGB=-201.741;VDB=0.294349;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G53|145|LOC_Os12g10510|protein_coding|CODING|LOC_Os12g10510.1|1|1),SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G53|145|LOC_Os12g10510|protein_coding|CODING|LOC_Os12g10510.2|1|1) FN3298-S.SNP.12:5590169 chr12:005590169 0 W/5590169-5590169 FN3298-S SNP C -> T AC=1;AN=184;BQB=0.997503;DP=3484;DP4=1499,1807,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.459e-09;MQSB=0.982796;RPB=0.999884;SGB=23.2751;VDB=0.792993;EFF=UTR_3_PRIME(MODIFIER||220||270|LOC_Os12g10540|protein_coding|CODING|LOC_Os12g10540.1|8|1),UTR_3_PRIME(MODIFIER||220||270|LOC_Os12g10540|protein_coding|CODING|LOC_Os12g10540.2|8|1),UTR_3_PRIME(MODIFIER||220||270|LOC_Os12g10540|protein_coding|CODING|LOC_Os12g10540.3|7|1),UTR_3_PRIME(MODIFIER||220||270|LOC_Os12g10540|protein_coding|CODING|LOC_Os12g10540.4|8|1),UTR_3_PRIME(MODIFIER||220||263|LOC_Os12g10540|protein_coding|CODING|LOC_Os12g10540.5|9|1) FN3481-S.SNP.12:5606627 chr12:005606627 0 W/5606627-5606627 FN3481-S SNP A -> T AC=2;AN=184;BQB=0.994049;DP=3527;DP4=2026,1127,20,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.04965e-15;MQSB=0.753383;RPB=0.439575;SGB=29.6292;VDB=0.825628;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.12:5628874 chr12:005628874 0 W/5628874-5628874 FN2794-S SNP C -> A AC=1;AN=198;BQB=0.631278;DP=6886;DP4=3843,2786,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=26;MQ0F=0.399071;MQB=0.974593;MQSB=0;RPB=0.992197;SGB=79.6954;VDB=0.544859;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.12:5647395 chr12:005647395 0 W/5647395-5647395 FN3981-S SNP C -> T AC=1;AN=168;BQB=0.648972;DP=4489;DP4=1099,3229,11,14;HOB=7.08617e-05;ICB=0.000142567;MQ=24;MQ0F=0.419693;MQB=0.734469;MQSB=0;RPB=0.270369;SGB=17.068;VDB=0.81043;EFF=INTRON(MODIFIER||||255|LOC_Os12g10600|protein_coding|CODING|LOC_Os12g10600.1|3|1) FN4234-S.SNP.12:5650994 chr12:005650994 0 W/5650994-5650994 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.772981;DP=3523;DP4=1451,2008,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=24;MQ0F=0.244394;MQB=0.033777;MQSB=1.60935e-20;RPB=0.963504;SGB=56.7575;VDB=0.453798;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.12:5651549 chr12:005651549 0 W/5651549-5651549 FN2412 SNP G -> A AC=1;AN=200;BQB=0.946432;DP=4228;DP4=1888,2113,12,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00756859;MQB=5.31996e-05;MQSB=0.88398;RPB=0.768254;SGB=61.9006;VDB=0.680752;EFF=INTRON(MODIFIER||||263|LOC_Os12g10604|protein_coding|CODING|LOC_Os12g10604.1|2|1) FN3607-S.SNP.12:5661205 chr12:005661205 0 W/5661205-5661205 FN3607-S SNP C -> T AC=1;AN=190;BQB=0.994492;DP=3742;DP4=1413,2171,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.00908605;MQB=0.487161;MQSB=7.52911e-32;RPB=0.744439;SGB=46.7622;VDB=0.742898;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.12:5665446 chr12:005665446 0 W/5665446-5665446 FN1561-S Single Base Substitution T-G INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1281-S.SNP.12:5679991 chr12:005679991 0 W/5679991-5679991 FN1281-S Single Base Substitution G-A INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN-171.SNP.12:5686199 chr12:005686199 0 W/5686199-5686199 FN-171 Single Base Substitution A-G INTRON HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2555-S.SNP.12:5691897 chr12:005691897 0 W/5691897-5691897 FN2555-S SNP A -> G AC=1;AN=198;BQB=0.953855;DP=4401;DP4=2185,1982,3,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.65358e-08;MQSB=0.874203;RPB=0.553926;SGB=40.149;VDB=0.0948553;EFF=INTERGENIC(MODIFIER||||||||||1) FN-117.SNP.12:5691925 chr12:005691925 0 W/5691925-5691925 FN-117 Single Base Substitution G-A INTERGENIC HOMO SNo: 117, Mutant_ID: FN-117, Generation: M2, Mutations: 49, Genes: 10, Seed availability: Yes. FN3866-S.SNP.12:5709443 chr12:005709443 0 W/5709443-5709443 FN3866-S SNP G -> A AC=2;AN=158;BQB=0.878538;DP=2421;DP4=861,1453,6,20;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.80818e-14;MQSB=0.8652;RPB=0.516088;SGB=77.8763;VDB=0.487424;EFF=INTERGENIC(MODIFIER||||||||||1) FN3512-S.SNP.12:5713737 chr12:005713737 0 W/5713737-5713737 FN3512-S SNP T -> A AC=1;AN=188;BQB=0.895636;DP=2325;DP4=1225,1049,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000430108;MQB=2.28067e-05;MQSB=0.998152;RPB=0.602707;SGB=25.3545;VDB=0.690639;EFF=INTERGENIC(MODIFIER||||||||||1) FN4023-S.SNP.12:5722632 chr12:005722632 0 W/5722632-5722632 FN4023-S SNP T -> C AC=1;AN=168;BQB=0.830536;DP=2492;DP4=1118,1291,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.07277e-07;MQSB=0.870809;RPB=0.764428;SGB=31.3171;VDB=0.00346435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.12:5723168 chr12:005723168 0 W/5723168-5723168 FN3380-S SNP T -> C AC=1;AN=184;BQB=0.62749;DP=2964;DP4=1370,1408,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.26944e-07;MQSB=0.987157;RPB=0.988021;SGB=49.835;VDB=0.9549;EFF=INTERGENIC(MODIFIER||||||||||1) FN513-S.SNP.12:5727367 chr12:005727367 0 W/5727367-5727367 FN513-S Single Base Substitution G-C INTERGENIC HET SNo: 511, Mutant_ID: FN513-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN4272-S.SNP.12:5730047 chr12:005730047 0 W/5730047-5730047 FN4272-S SNP A -> T AC=2;AN=170;BQB=0.99427;DP=2628;DP4=1133,1404,17,32;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=3.55064e-25;MQSB=0.0969417;RPB=0.978729;SGB=206.829;VDB=0.884043;EFF=INTERGENIC(MODIFIER||||||||||1) FN1233-S.SNP.12:5745956 chr12:005745956 0 W/5745956-5745956 FN1233-S Single Base Substitution A-C INTRON HOMO SNo: 1058, Mutant_ID: FN1233-S, Generation: M2, Mutations: 66, Genes: 8, Seed availability: Yes. FN1514-S.SNP.12:5752453 chr12:005752453 0 W/5752453-5752453 FN1514-S Single Base Substitution T-C INTRON HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN3514-S.SNP.12:5754440 chr12:005754440 0 W/5754440-5754440 FN3514-S SNP T -> A AC=1;AN=188;BQB=0.977169;DP=3137;DP4=1592,1386,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.89173e-07;MQSB=0.946385;RPB=0.826799;SGB=43.0708;VDB=0.343236;EFF=INTERGENIC(MODIFIER||||||||||1) FN1344-S.SNP.12:5761717 chr12:005761717 0 W/5761717-5761717 FN1344-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g10730 glutathione S-transferase, putative, expressed SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN2353.SNP.12:5778730 chr12:005778730 0 W/5778730-5778730 FN2353 SNP A -> G AC=1;AN=192;BQB=0.539951;DP=4705;DP4=2253,2170,15,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.20932e-14;MQSB=0.38539;RPB=0.791206;SGB=103.983;VDB=0.739121;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.12:5779631 chr12:005779631 0 W/5779631-5779631 FN763-S Single Base Substitution T-C INTERGENIC HOMO SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2378.SNP.12:5788286 chr12:005788286 0 W/5788286-5788286 FN2378 SNP T -> A AC=1;AN=192;BQB=0.312367;DP=4290;DP4=1934,2014,15,12;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0;MQB=1.7223e-05;MQSB=5.29503e-23;RPB=0.990641;SGB=117.676;VDB=0.174718;EFF=INTERGENIC(MODIFIER||||||||||1) FN1516-S.SNP.12:5788951 chr12:005788951 0 W/5788951-5788951 FN1516-S Single Base Substitution C-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN1209-S.SNP.12:5789926 chr12:005789926 0 W/5789926-5789926 FN1209-S Single Base Substitution C-T INTERGENIC HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN402-S.SNP.12:5792259 chr12:005792259 0 W/5792259-5792259 FN402-S Single Base Substitution C-T INTERGENIC HOMO SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN1394-S.SNP.12:5792791 chr12:005792791 0 W/5792791-5792791 FN1394-S Single Base Substitution G-A INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN785-S.SNP.12:5799135 chr12:005799135 0 W/5799135-5799135 FN785-S Single Base Substitution G-C INTERGENIC HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN1394-S.SNP.12:5807696 chr12:005807696 0 W/5807696-5807696 FN1394-S Single Base Substitution T-A INTERGENIC HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN4111-S.SNP.12:5808305 chr12:005808305 0 W/5808305-5808305 FN4111-S SNP A -> G AC=1;AN=182;BQB=0.99912;DP=2631;DP4=1184,1264,10,11;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0;MQB=3.25446e-06;MQSB=0.623614;RPB=0.999902;SGB=-38.3068;VDB=0.319005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Ccg|S1478P|1537|LOC_Os12g10800|protein_coding|CODING|LOC_Os12g10800.1|10|1) FN624-S.SNP.12:5809042 chr12:005809042 0 W/5809042-5809042 FN624-S Single Base Substitution C-A INTRON HET SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN2356.SNP.12:5809641 chr12:005809641 0 W/5809641-5809641 FN2356 SNP A -> G AC=2;AN=192;BQB=0.2283;DP=4831;DP4=2150,2442,32,24;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.0233906;MQB=1.89346e-06;MQSB=6.91177e-38;RPB=0.524454;SGB=128.924;VDB=0.715346;EFF=INTRON(MODIFIER||||1537|LOC_Os12g10800|protein_coding|CODING|LOC_Os12g10800.1|9|1) FN3450-S.SNP.12:5818251 chr12:005818251 0 W/5818251-5818251 FN3450-S SNP G -> T AC=2;AN=184;BQB=0.962998;DP=2877;DP4=1384,1408,11,12;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0;MQB=0.000448625;MQSB=0.0592335;RPB=0.781483;SGB=70.9657;VDB=0.583416;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Tct|A48S|270|LOC_Os12g10810|protein_coding|CODING|LOC_Os12g10810.1|2|1) FN_N1-119-1.SNP.12:6129086 chr12:006129086 0 W/6129086-6129086 FN_N1-119-1 Single Base Substitution G-C Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN1415-S.SNP.12:6140844 chr12:006140844 0 W/6140844-6140844 FN1415-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g11370 verticillium wilt disease resistance protein, putative, expressed SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2725-S.SNP.12:6225119 chr12:006225119 0 W/6225119-6225119 FN2725-S SNP G -> A AC=1;AN=198;BQB=0.881744;DP=3731;DP4=1939,1574,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0032163;MQB=0.490972;MQSB=8.16455e-14;RPB=0.434044;SGB=4.67442;VDB=0.417694;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K292|993|LOC_Os12g11500|protein_coding|CODING|LOC_Os12g11500.1|1|1) W426-1-1.SNP.12:6525940 chr12:006525940 0 W/6525940-6525940 W426-1-1 Single Base Substitution G-A UTR_5_PRIME HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3815-S.SNP.12:6526181 chr12:006526181 0 W/6526181-6526181 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.634551;DP=1829;DP4=1441,333,7,1;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0331464;MQSB=1.39283e-06;RPB=0.96422;SGB=30.8803;VDB=0.50952;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Tta|V57L|157|LOC_Os12g11950|protein_coding|CODING|LOC_Os12g11950.1|1|1) FN1717-S.SNP.12:6535082 chr12:006535082 0 W/6535082-6535082 FN1717-S SNP G -> A AC=1;AN=188;BQB=0.120537;DP=3846;DP4=1704,2115,11,7;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.00026001;MQB=1.86713e-06;MQSB=0;RPB=0.995527;SGB=8.62479;VDB=0.96683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1400-S.SNP.12:6536098 chr12:006536098 0 W/6536098-6536098 FN1400-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2191-S.SNP.12:6536098 chr12:006536098 0 W/6536098-6536098 FN2191-S SNP G -> T AC=1;AN=190;BQB=0.477093;DP=5559;DP4=2495,2531,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000719554;MQB=1.97674e-09;MQSB=0.348144;RPB=0.917507;SGB=64.5316;VDB=0.346968;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.12:6536098 chr12:006536098 0 W/6536098-6536098 FN3652-S SNP G -> T AC=1;AN=190;BQB=0.999933;DP=2902;DP4=1128,1638,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00137836;MQB=2.44623e-08;MQSB=0.933398;RPB=0.693131;SGB=26.2136;VDB=0.0867196;EFF=INTERGENIC(MODIFIER||||||||||1) 707-5.SNP.12:6545134 chr12:006545134 0 W/6545134-6545134 707-5 Single Base Substitution T-C INTERGENIC Homo SNo: 1473, Mutant_ID: 707-5, Generation: M2, Mutations: 29, Genes: 32, Seed availability: Yes. FN2166-S.SNP.12:6545635 chr12:006545635 0 W/6545635-6545635 FN2166-S SNP T -> C AC=1;AN=168;BQB=0.0695178;DP=2126;DP4=1437,635,10,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0042333;MQB=0.00363759;MQSB=0.018198;RPB=0.952052;SGB=-16.665;VDB=0.122864;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.12:6557543 chr12:006557543 0 W/6557543-6557543 FN1381-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN2291.SNP.12:6559711 chr12:006559711 0 W/6559711-6559711 FN2291 SNP G -> A AC=1;AN=192;BQB=0.374677;DP=4614;DP4=2094,2257,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.0857e-09;MQSB=7.59024e-16;RPB=0.398821;SGB=35.5131;VDB=0.801134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2560-S.SNP.12:6559971 chr12:006559971 0 W/6559971-6559971 FN2560-S SNP G -> T AC=1;AN=198;BQB=0.919722;DP=3970;DP4=1870,1842,7,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000251889;MQB=1.56407e-07;MQSB=0.423735;RPB=0.998984;SGB=24.1541;VDB=0.645276;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.12:6566532 chr12:006566532 0 W/6566532-6566532 FN1488-S Single Base Substitution G-C INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN3691-S.SNP.12:6569728 chr12:006569728 0 W/6569728-6569728 FN3691-S SNP G -> C AC=1;AN=190;BQB=0.740215;DP=3106;DP4=1413,1578,2,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=7.04167e-06;MQSB=0.683387;RPB=0.881723;SGB=32.5467;VDB=0.0869848;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.12:6569831 chr12:006569831 0 W/6569831-6569831 FN2359 SNP G -> A AC=2;AN=192;BQB=0.945094;DP=5039;DP4=2272,2403,17,19;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=2.44902e-13;MQSB=0.108137;RPB=0.808701;SGB=37.0774;VDB=0.951694;EFF=INTERGENIC(MODIFIER||||||||||1) FN-283.SNP.12:6573556 chr12:006573556 0 W/6573556-6573556 FN-283 Single Base Substitution C-T INTERGENIC HET SNo: 279, Mutant_ID: FN-283, Generation: M2, Mutations: 73, Genes: 16, Seed availability: Yes. FN3909-S.SNP.12:6580769 chr12:006580769 0 W/6580769-6580769 FN3909-S SNP A -> T AC=1;AN=158;BQB=0.692967;DP=2631;DP4=1241,1293,5,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=2.5947e-05;MQSB=0.305791;RPB=0.507126;SGB=23.9652;VDB=0.874265;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:6589764 chr12:006589764 0 W/6589764-6589764 FN1520-S Single Base Substitution G-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1651-S.SNP.12:6590605 chr12:006590605 0 W/6590605-6590605 FN1651-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g12020 retrotransposon protein, putative, Ty1-copia subclass SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN2689-S.SNP.12:6596307 chr12:006596307 0 W/6596307-6596307 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.178257;DP=4608;DP4=2136,2237,13,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00564236;MQB=8.04891e-08;MQSB=1.90226e-11;RPB=0.996375;SGB=79.9264;VDB=0.857345;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A535V|580|LOC_Os12g12040|protein_coding|CODING|LOC_Os12g12040.1|3|1) FN3363-S.SNP.12:6596931 chr12:006596931 0 W/6596931-6596931 FN3363-S SNP T -> C AC=1;AN=184;BQB=0.998264;DP=2971;DP4=1382,1483,17,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00100976;MQB=1.22637e-14;MQSB=0.117109;RPB=0.0625307;SGB=99.14;VDB=0.215078;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tGc|Y327C|580|LOC_Os12g12040|protein_coding|CODING|LOC_Os12g12040.1|3|1) FN2550-S.SNP.12:6600231 chr12:006600231 0 W/6600231-6600231 FN2550-S SNP C -> T AC=2;AN=198;BQB=0.470083;DP=3386;DP4=1635,1415,7,5;HOB=0.019998;ICB=0.495001;MQ=42;MQ0F=0.020378;MQB=0.05287;MQSB=0;RPB=0.986283;SGB=49.5489;VDB=0.983005;EFF=INTERGENIC(MODIFIER||||||||||1) FN1307-S.SNP.12:6601592 chr12:006601592 0 W/6601592-6601592 FN1307-S Single Base Substitution G-T INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2477.SNP.12:6610514 chr12:006610514 0 W/6610514-6610514 FN2477 SNP C -> T AC=1;AN=200;BQB=0.131164;DP=4172;DP4=1908,2016,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.41043e-08;MQSB=0.162705;RPB=0.995003;SGB=6.27959;VDB=0.960592;EFF=INTERGENIC(MODIFIER||||||||||1) FN2232-S.SNP.12:6614269 chr12:006614269 0 W/6614269-6614269 FN2232-S SNP G -> A AC=1;AN=190;BQB=0.968013;DP=3973;DP4=2130,1520,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.37976e-08;MQSB=0.97969;RPB=0.945247;SGB=50.3161;VDB=0.931053;EFF=INTRON(MODIFIER||||114|LOC_Os12g12080|protein_coding|CODING|LOC_Os12g12080.4|1|1) W360-2S-2.SNP.12:6622379 chr12:006622379 0 W/6622379-6622379 W360-2S-2 Single Base Substitution C-T INTRON HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN2200-S.SNP.12:6626159 chr12:006626159 0 W/6626159-6626159 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.273329;DP=2972;DP4=705,2029,1,8;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000336474;MQB=0.000148816;MQSB=4.10849e-11;RPB=0.251619;SGB=35.4339;VDB=0.380722;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.12:6628036 chr12:006628036 0 W/6628036-6628036 FN2614-S SNP G -> A AC=1;AN=196;BQB=0.563645;DP=2705;DP4=2004,467,7,4;HOB=5.20616e-05;ICB=0.000104654;MQ=48;MQ0F=0;MQB=2.35346e-07;MQSB=0.0786558;RPB=0.981524;SGB=44.9538;VDB=0.729816;EFF=INTERGENIC(MODIFIER||||||||||1) FN2614-S.SNP.12:6628037 chr12:006628037 0 W/6628037-6628037 FN2614-S SNP G -> A AC=1;AN=196;BQB=0.864514;DP=2717;DP4=2007,482,7,4;HOB=5.20616e-05;ICB=0.000104654;MQ=48;MQ0F=0;MQB=2.42646e-07;MQSB=0.0279711;RPB=0.996973;SGB=44.9538;VDB=0.736405;EFF=INTERGENIC(MODIFIER||||||||||1) FN4030-S.SNP.12:6628095 chr12:006628095 0 W/6628095-6628095 FN4030-S SNP C -> T AC=2;AN=168;BQB=0.992267;DP=1580;DP4=1375,139,17,1;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.85869e-09;MQSB=8.87303e-05;RPB=0.655462;SGB=74.3269;VDB=0.0701569;EFF=INTERGENIC(MODIFIER||||||||||1) 704-1-1.SNP.12:6629708 chr12:006629708 0 W/6629708-6629708 704-1-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1455, Mutant_ID: 704-1-1, Generation: M2, Mutations: 32, Genes: 12, Seed availability: No. 704-2.SNP.12:6629708 chr12:006629708 0 W/6629708-6629708 704-2 Single Base Substitution C-A INTERGENIC HET SNo: 1456, Mutant_ID: 704-2, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-4-3.SNP.12:6629708 chr12:006629708 0 W/6629708-6629708 704-4-3 Single Base Substitution C-A INTERGENIC Homo SNo: 1458, Mutant_ID: 704-4-3, Generation: M2, Mutations: 36, Genes: 28, Seed availability: Yes. 704-5.SNP.12:6629708 chr12:006629708 0 W/6629708-6629708 704-5 Single Base Substitution C-A INTERGENIC Homo SNo: 1459, Mutant_ID: 704-5, Generation: M2, Mutations: 22, Genes: 10, Seed availability: Yes. 704-6.SNP.12:6629708 chr12:006629708 0 W/6629708-6629708 704-6 Single Base Substitution C-A INTERGENIC Homo SNo: 1460, Mutant_ID: 704-6, Generation: M2, Mutations: 19, Genes: 8, Seed availability: No. FN2645-S.SNP.12:6635269 chr12:006635269 0 W/6635269-6635269 FN2645-S SNP G -> A AC=1;AN=200;BQB=0.697387;DP=5043;DP4=2588,2216,10,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.86494e-10;MQSB=0.828621;RPB=0.947449;SGB=114.132;VDB=0.96548;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.12:6635952 chr12:006635952 0 W/6635952-6635952 FN1122-S Single Base Substitution C-T INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN2680-S.SNP.12:6645160 chr12:006645160 0 W/6645160-6645160 FN2680-S SNP A -> T AC=1;AN=200;BQB=0.0201423;DP=4642;DP4=2003,1731,28,22;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0;MQB=0.0287612;MQSB=2.11692e-33;RPB=0.144268;SGB=-921.947;VDB=0.967887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.12:6680685 chr12:006680685 0 W/6680685-6680685 FN2202-S SNP C -> T AC=2;AN=190;BQB=0.262702;DP=5131;DP4=2298,2466,31,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.67035e-32;MQSB=0.958683;RPB=0.592799;SGB=136.03;VDB=0.281683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-120.SNP.12:6696017 chr12:006696017 0 W/6696017-6696017 FN-120 Single Base Substitution C-T INTERGENIC HET SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN581-S.SNP.12:6715776 chr12:006715776 0 W/6715776-6715776 FN581-S Single Base Substitution C-T INTRON HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2129-S.SNP.12:6728569 chr12:006728569 0 W/6728569-6728569 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.81602;DP=3015;DP4=1478,1484,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0;MQB=0.000132506;MQSB=0.648964;RPB=0.972462;SGB=14.2064;VDB=0.167647;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.12:6733250 chr12:006733250 0 W/6733250-6733250 FN1446-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g12260 diacylglycerol kinase 1, putative, expressed SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN921-S.SNP.12:6739575 chr12:006739575 0 W/6739575-6739575 FN921-S Single Base Substitution G-T INTERGENIC HOMO SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN-144.SNP.12:6742291 chr12:006742291 0 W/6742291-6742291 FN-144 Single Base Substitution T-C INTERGENIC HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN466-S.SNP.12:6743358 chr12:006743358 0 W/6743358-6743358 FN466-S Single Base Substitution A-G INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN450-S.SNP.12:6748174 chr12:006748174 0 W/6748174-6748174 FN450-S Single Base Substitution G-C INTERGENIC HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN740-S.SNP.12:6767165 chr12:006767165 0 W/6767165-6767165 FN740-S Single Base Substitution T-A INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN3699-S.SNP.12:6773703 chr12:006773703 0 W/6773703-6773703 FN3699-S SNP A -> G AC=2;AN=190;BQB=0.420391;DP=2016;DP4=775,928,14,13;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.6571e-11;MQSB=0.748865;RPB=0.733645;SGB=-9.56446;VDB=0.94245;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.12:6773712 chr12:006773712 0 W/6773712-6773712 FN3699-S SNP C -> T AC=2;AN=190;BQB=0.535236;DP=1971;DP4=875,1004,10,8;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.39924e-11;MQSB=0.963977;RPB=0.868536;SGB=76.4186;VDB=0.779209;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.12:6774019 chr12:006774019 0 W/6774019-6774019 FN282-S Single Base Substitution C-T INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN1739-S.SNP.12:6775202 chr12:006775202 0 W/6775202-6775202 FN1739-S SNP G -> A AC=1;AN=188;BQB=0.0146254;DP=2535;DP4=1570,903,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0;MQB=0.099682;MQSB=0.360097;RPB=0.917686;SGB=-12.2833;VDB=0.250752;EFF=INTERGENIC(MODIFIER||||||||||1) FN1002-S.SNP.12:6777114 chr12:006777114 0 W/6777114-6777114 FN1002-S Single Base Substitution A-G INTRON HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN3885-S.SNP.12:6787358 chr12:006787358 0 W/6787358-6787358 FN3885-S SNP C -> T AC=1;AN=158;BQB=0.893791;DP=2439;DP4=1054,1305,9,13;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=7.97651e-07;MQSB=0.0982387;RPB=0.586532;SGB=90.7616;VDB=0.436153;EFF=INTRON(MODIFIER||||1371|LOC_Os12g12340|protein_coding|CODING|LOC_Os12g12340.1|7|1) FN687-S.SNP.12:6787725 chr12:006787725 0 W/6787725-6787725 FN687-S Single Base Substitution G-A INTRON HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1519-S.SNP.12:6791965 chr12:006791965 0 W/6791965-6791965 FN1519-S Single Base Substitution G-A INTERGENIC HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN2784-S.SNP.12:6793390 chr12:006793390 0 W/6793390-6793390 FN2784-S SNP A -> T AC=1;AN=198;BQB=0.0740633;DP=4106;DP4=1809,2039,14,15;HOB=5.10152e-05;ICB=0.000102546;MQ=33;MQ0F=0.0358013;MQB=0.0270469;MQSB=8.64377e-24;RPB=0.0763711;SGB=127.666;VDB=0.890423;EFF=INTERGENIC(MODIFIER||||||||||1) FN804-S.SNP.12:6801941 chr12:006801941 0 W/6801941-6801941 FN804-S Single Base Substitution G-A INTRON HET SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN542-S.SNP.12:6811448 chr12:006811448 0 W/6811448-6811448 FN542-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN-179.SNP.12:6814288 chr12:006814288 0 W/6814288-6814288 FN-179 Single Base Substitution T-C INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN2349.SNP.12:6817908 chr12:006817908 0 W/6817908-6817908 FN2349 SNP C -> T AC=1;AN=192;BQB=0.915726;DP=5271;DP4=2653,2358,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.5721e-11;MQSB=0.71805;RPB=0.0935963;SGB=16.7409;VDB=0.198215;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W710*|716|LOC_Os12g12380|protein_coding|CODING|LOC_Os12g12380.1|2|1),STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W710*|714|LOC_Os12g12380|protein_coding|CODING|LOC_Os12g12380.2|2|1),STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W710*|714|LOC_Os12g12380|protein_coding|CODING|LOC_Os12g12380.3|2|1) W466-5-1.SNP.12:6819187 chr12:006819187 0 W/6819187-6819187 W466-5-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g12380 transposon protein, putative, unclassified, expressed SNo: 1418, Mutant_ID: W466-5-1, Generation: M2, Mutations: 67, Genes: 11, Seed availability: Yes. FN2300.SNP.12:6863228 chr12:006863228 0 W/6863228-6863228 FN2300 SNP T -> C AC=1;AN=192;BQB=0.852225;DP=4697;DP4=2117,2184,13,5;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0;MQB=3.09241e-06;MQSB=0.00161128;RPB=0.493193;SGB=-81.3174;VDB=0.291978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.12:6875141 chr12:006875141 0 W/6875141-6875141 FN2638-S SNP T -> C AC=1;AN=200;BQB=0.873733;DP=4770;DP4=2399,2152,10,6;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.000419287;MQB=9.17755e-06;MQSB=0.00425263;RPB=0.900728;SGB=47.4799;VDB=0.642316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.12:6893438 chr12:006893438 0 W/6893438-6893438 FN1389-S Single Base Substitution G-T INTRON Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN452-S.SNP.12:6909787 chr12:006909787 0 W/6909787-6909787 FN452-S Single Base Substitution A-G INTRON HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN-363.SNP.12:6913211 chr12:006913211 0 W/6913211-6913211 FN-363 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g12560 NADP-dependent oxidoreductase, putative, expressed SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN-363.SNP.12:6913582 chr12:006913582 0 W/6913582-6913582 FN-363 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g12560 NADP-dependent oxidoreductase, putative, expressed SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN624-S.SNP.12:6918485 chr12:006918485 0 W/6918485-6918485 FN624-S Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN1561-S.SNP.12:6919730 chr12:006919730 0 W/6919730-6919730 FN1561-S Single Base Substitution G-A INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-232.SNP.12:6921375 chr12:006921375 0 W/6921375-6921375 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3286-S.SNP.12:6922202 chr12:006922202 0 W/6922202-6922202 FN3286-S SNP T -> A AC=1;AN=184;BQB=0.779442;DP=2687;DP4=1244,1334,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000188628;MQSB=0.801946;RPB=0.966274;SGB=-0.806606;VDB=0.888914;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.12:6924547 chr12:006924547 0 W/6924547-6924547 FN2544-S SNP G -> A AC=2;AN=198;BQB=0.993804;DP=3592;DP4=1591,1501,9,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.8794e-10;MQSB=0.939161;RPB=0.903422;SGB=72.5245;VDB=0.822234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1626-S.SNP.12:6948142 chr12:006948142 0 W/6948142-6948142 FN1626-S SNP G -> A AC=1;AN=188;BQB=0.363148;DP=3207;DP4=1809,1365,12,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.50598e-10;MQSB=0.999993;RPB=0.956201;SGB=13.2547;VDB=0.0182487;EFF=UTR_3_PRIME(MODIFIER||261||154|LOC_Os12g12600|protein_coding|CODING|LOC_Os12g12600.1|2|1) FN620-S.SNP.12:6948487 chr12:006948487 0 W/6948487-6948487 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN4099-S.SNP.12:6957263 chr12:006957263 0 W/6957263-6957263 FN4099-S SNP G -> T AC=1;AN=182;BQB=0.80147;DP=2798;DP4=1474,1253,6,8;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0103645;MQB=0.000483037;MQSB=1.04692e-12;RPB=0.786961;SGB=39.1386;VDB=0.522795;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aAg|T99K|424|LOC_Os12g12620|protein_coding|CODING|LOC_Os12g12620.1|1|1) FN2677-S.SNP.12:6957888 chr12:006957888 0 W/6957888-6957888 FN2677-S SNP A -> C AC=2;AN=200;BQB=0.9298;DP=4455;DP4=2107,1884,23,14;HOB=0.0198;ICB=0.495051;MQ=31;MQ0F=0;MQB=0.837206;MQSB=0.242651;RPB=0.5892;SGB=123.188;VDB=0.987908;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTg/tGg|L168W|217|LOC_Os12g12630|protein_coding|CODING|LOC_Os12g12630.1|4|1) FN2362.SNP.12:7131410 chr12:007131410 0 W/7131410-7131410 FN2362 SNP C -> T AC=1;AN=192;BQB=0.294513;DP=4517;DP4=2135,2160,10,7;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=1.02384e-06;MQSB=0.122425;RPB=0.385312;SGB=50.4731;VDB=0.00277078;EFF=INTRON(MODIFIER||||215|LOC_Os12g12880|protein_coding|CODING|LOC_Os12g12880.1|1|1) FN2362.SNP.12:7131413 chr12:007131413 0 W/7131413-7131413 FN2362 SNP G -> T AC=1;AN=192;BQB=0.101093;DP=4509;DP4=2108,2161,12,8;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0;MQB=1.65464e-06;MQSB=0.0536436;RPB=0.745739;SGB=-12.5113;VDB=0.134015;EFF=INTRON(MODIFIER||||215|LOC_Os12g12880|protein_coding|CODING|LOC_Os12g12880.1|1|1) FN2263-S.SNP.12:7167855 chr12:007167855 0 W/7167855-7167855 FN2263-S SNP G -> A AC=1;AN=190;BQB=0.88966;DP=4504;DP4=1845,2043,15,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.53953e-12;MQSB=0.990431;RPB=0.999193;SGB=-7.12933;VDB=0.70063;EFF=INTRON(MODIFIER||||583|LOC_Os12g12934|protein_coding|CODING|LOC_Os12g12934.1|2|1) FN4081-S.SNP.12:7167990 chr12:007167990 0 W/7167990-7167990 FN4081-S SNP T -> C AC=2;AN=182;BQB=0.959398;DP=3042;DP4=1576,1259,20,16;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.94904e-17;MQSB=0.933226;RPB=0.988246;SGB=116.377;VDB=0.721869;EFF=INTRON(MODIFIER||||583|LOC_Os12g12934|protein_coding|CODING|LOC_Os12g12934.1|2|1) FN2451.SNP.12:7171238 chr12:007171238 0 W/7171238-7171238 FN2451 SNP C -> A AC=1;AN=200;BQB=0.0496207;DP=5207;DP4=2197,2296,21,13;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0;MQB=0.00788125;MQSB=1.35789e-05;RPB=0.707569;SGB=-196.428;VDB=0.859748;EFF=INTERGENIC(MODIFIER||||||||||1) FN-56.SNP.12:7187790 chr12:007187790 0 W/7187790-7187790 FN-56 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g12970 RWP-RK domain-containing protein, putative, expressed SNo: 56, Mutant_ID: FN-56, Generation: M2, Mutations: 45, Genes: 14, Seed availability: Yes. FN2597-S.SNP.12:7187970 chr12:007187970 0 W/7187970-7187970 FN2597-S SNP C -> T AC=1;AN=198;BQB=0.805791;DP=4269;DP4=2040,1971,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234247;MQB=2.50401e-12;MQSB=0.796651;RPB=0.071188;SGB=81.7147;VDB=0.0264192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G65S|452|LOC_Os12g12970|protein_coding|CODING|LOC_Os12g12970.1|1|1) FN2597-S.SNP.12:7187971 chr12:007187971 0 W/7187971-7187971 FN2597-S SNP G -> T AC=1;AN=198;BQB=0.902679;DP=4267;DP4=2028,1960,11,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000234357;MQB=2.1134e-12;MQSB=0.890446;RPB=0.0514615;SGB=81.7147;VDB=0.0257385;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G64|452|LOC_Os12g12970|protein_coding|CODING|LOC_Os12g12970.1|1|1) FN508-S.SNP.12:7189973 chr12:007189973 0 W/7189973-7189973 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN2701-S.SNP.12:7190203 chr12:007190203 0 W/7190203-7190203 FN2701-S SNP T -> C AC=1;AN=200;BQB=0.668362;DP=4718;DP4=2234,2251,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56192e-08;MQSB=0.999748;RPB=0.841321;SGB=3.06925;VDB=0.83284;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.12:7191314 chr12:007191314 0 W/7191314-7191314 FN3345-S SNP A -> T AC=1;AN=184;BQB=0.999967;DP=2976;DP4=1484,1370,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.69801e-09;MQSB=0.0978482;RPB=0.725484;SGB=62.3078;VDB=0.779786;EFF=INTERGENIC(MODIFIER||||||||||1) FN_841-7-2.SNP.12:7202093 chr12:007202093 0 W/7202093-7202093 FN_841-7-2 Single Base Substitution C-G Homo LOC_Os12g13000 expressed protein SNo: 1500, Mutant_ID: FN_841-7-2, Generation: M3, Mutations: 28, Genes: 36, Seed availability: Yes. FN1371-S.SNP.12:7204675 chr12:007204675 0 W/7204675-7204675 FN1371-S Single Base Substitution G-A INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN4046-S.SNP.12:7204799 chr12:007204799 0 W/7204799-7204799 FN4046-S SNP C -> T AC=2;AN=168;BQB=0.267538;DP=3150;DP4=1413,1596,10,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.0103e-07;MQSB=0.965537;RPB=0.402406;SGB=11.3448;VDB=0.498372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.12:7205890 chr12:007205890 0 W/7205890-7205890 FN1477-S Single Base Substitution C-A INTERGENIC HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN524-S.SNP.12:7206074 chr12:007206074 0 W/7206074-7206074 FN524-S Single Base Substitution A-G INTERGENIC HET SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN3828-S.SNP.12:7208767 chr12:007208767 0 W/7208767-7208767 FN3828-S SNP G -> A AC=1;AN=190;BQB=0.997984;DP=2523;DP4=1176,1257,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.5289e-08;MQSB=0.843984;RPB=0.551975;SGB=32.5467;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.12:7210865 chr12:007210865 0 W/7210865-7210865 FN2582-S SNP A -> G AC=1;AN=198;BQB=0.74946;DP=4340;DP4=2294,1855,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.13854e-08;MQSB=0.991834;RPB=0.896046;SGB=32.9588;VDB=0.092441;EFF=INTRON(MODIFIER||||932|LOC_Os12g13010|protein_coding|CODING|LOC_Os12g13010.1|1|1) FN2719-S.SNP.12:7218020 chr12:007218020 0 W/7218020-7218020 FN2719-S SNP G -> A AC=2;AN=200;BQB=0.997868;DP=4959;DP4=2475,2203,24,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.90095e-27;MQSB=0.292013;RPB=0.828439;SGB=-49.5294;VDB=0.981664;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G159R|892|LOC_Os12g13020|protein_coding|CODING|LOC_Os12g13020.1|2|1) FN-394.SNP.12:7220341 chr12:007220341 0 W/7220341-7220341 FN-394 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2531-S.SNP.12:7225046 chr12:007225046 0 W/7225046-7225046 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.759729;DP=3913;DP4=1937,1723,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.79976e-07;MQSB=0.981083;RPB=0.763851;SGB=36.5539;VDB=0.891719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1395-S.SNP.12:7226280 chr12:007226280 0 W/7226280-7226280 FN1395-S Single Base Substitution A-G INTERGENIC HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN-247.SNP.12:7236124 chr12:007236124 0 W/7236124-7236124 FN-247 Single Base Substitution G-A INTRON HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN3569-S.SNP.12:7236857 chr12:007236857 0 W/7236857-7236857 FN3569-S SNP G -> T AC=1;AN=188;BQB=0.99372;DP=2635;DP4=1311,1260,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000379507;MQB=0.000521433;MQSB=0.0199849;RPB=0.999916;SGB=39.8925;VDB=0.194572;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A158S|177|LOC_Os12g13030|protein_coding|CODING|LOC_Os12g13030.1|4|1) FN1015-S.SNP.12:7238252 chr12:007238252 0 W/7238252-7238252 FN1015-S Single Base Substitution T-C INTERGENIC HOMO SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1423-S.SNP.12:7239456 chr12:007239456 0 W/7239456-7239456 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN-285.SNP.12:7240381 chr12:007240381 0 W/7240381-7240381 FN-285 Single Base Substitution A-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-167.SNP.12:7240864 chr12:007240864 0 W/7240864-7240864 FN-167 Single Base Substitution A-C INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN542-S.SNP.12:7258958 chr12:007258958 0 W/7258958-7258958 FN542-S Single Base Substitution G-T INTERGENIC HET SNo: 538, Mutant_ID: FN542-S, Generation: M2, Mutations: 63, Genes: 22, Seed availability: Yes. FN-252.SNP.12:7263028 chr12:007263028 0 W/7263028-7263028 FN-252 Single Base Substitution A-C INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN2433.SNP.12:7265517 chr12:007265517 0 W/7265517-7265517 FN2433 SNP G -> A AC=1;AN=200;BQB=0.319331;DP=5285;DP4=2363,2618,13,9;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0575213;MQB=0.0209919;MQSB=1.54782e-12;RPB=0.798211;SGB=95.7111;VDB=0.451109;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T151|696|LOC_Os12g13080|protein_coding|CODING|LOC_Os12g13080.1|1|1) FN3288-S.SNP.12:7266928 chr12:007266928 0 W/7266928-7266928 FN3288-S SNP C -> T AC=1;AN=184;BQB=0.919371;DP=3907;DP4=1367,2422,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0199642;MQB=0.573706;MQSB=0;RPB=0.821827;SGB=66.8296;VDB=0.787351;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S586|696|LOC_Os12g13080|protein_coding|CODING|LOC_Os12g13080.1|3|1) FN2630-S.SNP.12:7268966 chr12:007268966 0 W/7268966-7268966 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.327361;DP=4812;DP4=2303,2262,10,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62085e-13;MQSB=0.943164;RPB=0.301625;SGB=42.5108;VDB=0.00321949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.12:7268967 chr12:007268967 0 W/7268967-7268967 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.935217;DP=4822;DP4=2308,2235,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.29554e-14;MQSB=0.993148;RPB=0.950327;SGB=45.1159;VDB=0.132717;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.12:7271488 chr12:007271488 0 W/7271488-7271488 FN852-S Single Base Substitution T-C INTERGENIC HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN814-S.SNP.12:7274505 chr12:007274505 0 W/7274505-7274505 FN814-S Single Base Substitution G-A INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-207.SNP.12:7279180 chr12:007279180 0 W/7279180-7279180 FN-207 Single Base Substitution C-T INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3983-S.SNP.12:7297485 chr12:007297485 0 W/7297485-7297485 FN3983-S SNP T -> C AC=1;AN=168;BQB=0.953757;DP=2716;DP4=1351,1257,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86158e-08;MQSB=0.955245;RPB=0.615163;SGB=48.4712;VDB=0.247889;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V163A|225|LOC_Os12g13120|protein_coding|CODING|LOC_Os12g13120.1|5|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V163A|225|LOC_Os12g13120|protein_coding|CODING|LOC_Os12g13120.2|5|1) FN1200-S.SNP.12:7299139 chr12:007299139 0 W/7299139-7299139 FN1200-S Single Base Substitution T-A INTRON HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-6.SNP.12:7300309 chr12:007300309 0 W/7300309-7300309 FN-6 Single Base Substitution T-A INTRON Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN3364-S.SNP.12:7301899 chr12:007301899 0 W/7301899-7301899 FN3364-S SNP G -> A AC=2;AN=184;BQB=0.795117;DP=3653;DP4=1485,1934,11,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000273748;MQB=9.26833e-16;MQSB=0.760613;RPB=0.605095;SGB=99.14;VDB=0.990066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2094-S.SNP.12:7313077 chr12:007313077 0 W/7313077-7313077 FN2094-S SNP G -> A AC=1;AN=168;BQB=0.0935395;DP=4085;DP4=1947,2086,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0.000331317;MQSB=0.000372972;RPB=0.88403;SGB=-95.493;VDB=0.85778;EFF=INTERGENIC(MODIFIER||||||||||1) FN3356-S.SNP.12:7313628 chr12:007313628 0 W/7313628-7313628 FN3356-S SNP G -> A AC=1;AN=184;BQB=0.995472;DP=3159;DP4=1690,1324,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.00958e-10;MQSB=0.954921;RPB=0.660617;SGB=25.7969;VDB=0.00589069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.12:7315568 chr12:007315568 0 W/7315568-7315568 FN2340 SNP G -> T AC=1;AN=192;BQB=0.335481;DP=4244;DP4=1931,2047,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.51243e-14;MQSB=0.0822604;RPB=0.538286;SGB=86.1165;VDB=0.605773;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.12:7322769 chr12:007322769 0 W/7322769-7322769 FN3848-S SNP T -> C AC=1;AN=158;BQB=0.911242;DP=2477;DP4=1160,1241,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.33964e-08;MQSB=0.980135;RPB=0.980158;SGB=47.0672;VDB=0.0797555;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tct/Cct|S1061P|2453|LOC_Os12g13150|protein_coding|CODING|LOC_Os12g13150.1|8|1) FN3697-S.SNP.12:7324793 chr12:007324793 0 W/7324793-7324793 FN3697-S SNP A -> G AC=1;AN=190;BQB=0.973184;DP=2963;DP4=1487,1357,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.28112e-05;MQSB=0.893671;RPB=0.956203;SGB=39.9877;VDB=0.585652;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E1614G|2453|LOC_Os12g13150|protein_coding|CODING|LOC_Os12g13150.1|11|1) FN3615-S.SNP.12:7330657 chr12:007330657 0 W/7330657-7330657 FN3615-S SNP G -> A AC=1;AN=190;BQB=0.981068;DP=2947;DP4=1363,1454,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1695e-10;MQSB=0.49818;RPB=0.894113;SGB=57.4238;VDB=0.988455;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P95|243|LOC_Os12g13160|protein_coding|CODING|LOC_Os12g13160.1|1|1) FN585-S.SNP.12:7338211 chr12:007338211 0 W/7338211-7338211 FN585-S Single Base Substitution G-A INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN1250-S.SNP.12:7342365 chr12:007342365 0 W/7342365-7342365 FN1250-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN1136-19-S.SNP.12:7344007 chr12:007344007 0 W/7344007-7344007 FN1136-19-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3715-S.SNP.12:7349008 chr12:007349008 0 W/7349008-7349008 FN3715-S SNP G -> A AC=1;AN=190;BQB=0.748399;DP=3023;DP4=1436,1500,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000661594;MQB=0.000135545;MQSB=0.919343;RPB=0.966304;SGB=44.5415;VDB=0.861992;EFF=INTRON(MODIFIER||||843|LOC_Os12g13180|protein_coding|CODING|LOC_Os12g13180.1|7|1) FN1153-S.SNP.12:7350708 chr12:007350708 0 W/7350708-7350708 FN1153-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g13190 retrotransposon protein, putative, unclassified, expressed SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3791-S.SNP.12:7368652 chr12:007368652 0 W/7368652-7368652 FN3791-S SNP A -> G AC=1;AN=190;BQB=0.999936;DP=3165;DP4=1489,1525,8,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.73379e-13;MQSB=0.976905;RPB=0.786182;SGB=41.5369;VDB=0.2852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2260-S.SNP.12:7372084 chr12:007372084 0 W/7372084-7372084 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.862675;DP=4954;DP4=2419,2229,22,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29005e-18;MQSB=0.935652;RPB=0.902587;SGB=110.732;VDB=0.482263;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.12:7378007 chr12:007378007 0 W/7378007-7378007 FN360-S Single Base Substitution G-A INTRON HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN360-S.SNP.12:7378010 chr12:007378010 0 W/7378010-7378010 FN360-S Single Base Substitution T-G INTRON HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN1093-S.SNP.12:7378271 chr12:007378271 0 W/7378271-7378271 FN1093-S Single Base Substitution T-C INTRON HOMO SNo: 971, Mutant_ID: FN1093-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2347.SNP.12:7382449 chr12:007382449 0 W/7382449-7382449 FN2347 SNP T -> A AC=2;AN=192;BQB=0.994933;DP=4834;DP4=2235,2317,17,28;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.23456e-22;MQSB=0.229772;RPB=0.974865;SGB=100.716;VDB=0.0909491;EFF=INTRON(MODIFIER||||550|LOC_Os12g13270|protein_coding|CODING|LOC_Os12g13270.1|5|1) FN4065-S.SNP.12:7387756 chr12:007387756 0 W/7387756-7387756 FN4065-S SNP G -> A AC=1;AN=168;BQB=0.91317;DP=2589;DP4=1085,1397,5,4;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0038625;MQB=0.000655054;MQSB=0.083235;RPB=0.775846;SGB=21.0249;VDB=0.682146;EFF=INTRON(MODIFIER||||135|LOC_Os12g13280|protein_coding|CODING|LOC_Os12g13280.1|1|1) FN266-S.SNP.12:7390650 chr12:007390650 0 W/7390650-7390650 FN266-S Single Base Substitution A-T START_GAINED HET LOC_Os12g13290 expressed protein SNo: 265, Mutant_ID: FN266-S, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1444-S.SNP.12:7394959 chr12:007394959 0 W/7394959-7394959 FN1444-S Single Base Substitution T-G INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN701-S.SNP.12:7397489 chr12:007397489 0 W/7397489-7397489 FN701-S Single Base Substitution C-T INTERGENIC HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN777-S.SNP.12:7398962 chr12:007398962 0 W/7398962-7398962 FN777-S Single Base Substitution G-A INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN2146-S.SNP.12:7401851 chr12:007401851 0 W/7401851-7401851 FN2146-S SNP G -> A AC=1;AN=168;BQB=0.173998;DP=3125;DP4=1883,1207,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.53245e-09;MQSB=0.958601;RPB=0.875719;SGB=-13.6493;VDB=0.939134;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.12:7405757 chr12:007405757 0 W/7405757-7405757 FN2295 SNP C -> A AC=1;AN=192;BQB=0.929884;DP=2997;DP4=1000,1805,5,8;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.000667334;MQB=1.17822e-05;MQSB=1.64877e-19;RPB=0.909003;SGB=53.7748;VDB=0.848948;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.12:7406267 chr12:007406267 0 W/7406267-7406267 FN1401-S Single Base Substitution A-T INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2147-S.SNP.12:7412711 chr12:007412711 0 W/7412711-7412711 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.0580203;DP=4501;DP4=2157,2294,16,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.27593e-11;MQSB=0.999074;RPB=0.957067;SGB=-270.884;VDB=0.344185;EFF=INTERGENIC(MODIFIER||||||||||1) FN696-S.SNP.12:7413502 chr12:007413502 0 W/7413502-7413502 FN696-S Single Base Substitution A-T INTERGENIC HET SNo: 626, Mutant_ID: FN696-S, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN-162.SNP.12:7417691 chr12:007417691 0 W/7417691-7417691 FN-162 Single Base Substitution G-A INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1228-S.SNP.12:7417691 chr12:007417691 0 W/7417691-7417691 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN2249-S.SNP.12:7417691 chr12:007417691 0 W/7417691-7417691 FN2249-S SNP G -> A AC=2;AN=190;BQB=0.986307;DP=4992;DP4=2228,2109,18,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.39383e-22;MQSB=0.842079;RPB=0.403072;SGB=46.0658;VDB=0.130668;EFF=INTERGENIC(MODIFIER||||||||||1) FN4279-S.SNP.12:7417691 chr12:007417691 0 W/7417691-7417691 FN4279-S SNP G -> A AC=2;AN=170;BQB=0.88587;DP=2450;DP4=1229,1080,11,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.85663e-15;MQSB=0.671407;RPB=0.620025;SGB=79.6325;VDB=0.60167;EFF=INTERGENIC(MODIFIER||||||||||1) FN779-S.SNP.12:7417691 chr12:007417691 0 W/7417691-7417691 FN779-S Single Base Substitution G-A INTERGENIC HOMO SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN3713-S.SNP.12:7436353 chr12:007436353 0 W/7436353-7436353 FN3713-S SNP G -> T AC=1;AN=190;BQB=0.971901;DP=2739;DP4=1347,1302,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4533e-06;MQSB=0.990341;RPB=0.595567;SGB=49.0954;VDB=0.535431;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.12:7445111 chr12:007445111 0 W/7445111-7445111 FN2386 SNP A -> T AC=1;AN=192;BQB=0.765418;DP=5020;DP4=2364,2392,14,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.57958e-16;MQSB=0.836208;RPB=0.991008;SGB=131.369;VDB=0.435094;EFF=INTRON(MODIFIER||||906|LOC_Os12g13340|protein_coding|CODING|LOC_Os12g13340.1|1|1),INTRON(MODIFIER||||816|LOC_Os12g13340|protein_coding|CODING|LOC_Os12g13340.2|1|1) FN1076-S.SNP.12:7446959 chr12:007446959 0 W/7446959-7446959 FN1076-S Single Base Substitution A-T INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN1332-S.SNP.12:7454834 chr12:007454834 0 W/7454834-7454834 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN3383-S.SNP.12:7455894 chr12:007455894 0 W/7455894-7455894 FN3383-S SNP G -> A AC=1;AN=184;BQB=0.921668;DP=3124;DP4=1670,1339,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00160051;MQB=8.65071e-05;MQSB=0.928916;RPB=0.869791;SGB=57.786;VDB=0.147066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2661-S.SNP.12:7473769 chr12:007473769 0 W/7473769-7473769 FN2661-S SNP G -> A AC=2;AN=200;BQB=0.624768;DP=4619;DP4=2248,2123,17,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.5002e-24;MQSB=0.98743;RPB=0.300972;SGB=183.209;VDB=0.263517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.12:7482786 chr12:007482786 0 W/7482786-7482786 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.890883;DP=2834;DP4=1390,1332,11,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31655e-12;MQSB=0.992141;RPB=0.95596;SGB=71.6393;VDB=0.599365;EFF=INTERGENIC(MODIFIER||||||||||1) FN4180-S.SNP.12:7485026 chr12:007485026 0 W/7485026-7485026 FN4180-S SNP T -> C AC=1;AN=170;BQB=0.990399;DP=2651;DP4=1287,1310,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.37468e-07;MQSB=0.937678;RPB=0.589236;SGB=38.987;VDB=0.630515;EFF=INTRON(MODIFIER||||408|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.2|10|1),INTRON(MODIFIER||||478|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.1|10|1),INTRON(MODIFIER||||320|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.3|9|1) FN4302-S.SNP.12:7486127 chr12:007486127 0 W/7486127-7486127 FN4302-S SNP A -> G AC=1;AN=170;BQB=0.994501;DP=2300;DP4=1055,1177,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.10139e-10;MQSB=0.864513;RPB=0.71754;SGB=41.7633;VDB=0.152203;EFF=INTRON(MODIFIER||||478|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.1|7|1),INTRON(MODIFIER||||408|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.2|7|1),INTRON(MODIFIER||||320|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.3|6|1) FN4302-S.SNP.12:7486135 chr12:007486135 0 W/7486135-7486135 FN4302-S SNP G -> T AC=1;AN=170;BQB=0.872432;DP=2318;DP4=1042,1190,12,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.42095e-11;MQSB=0.815208;RPB=0.964855;SGB=48.6486;VDB=0.85687;EFF=INTRON(MODIFIER||||478|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.1|7|1),INTRON(MODIFIER||||408|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.2|7|1),INTRON(MODIFIER||||320|LOC_Os12g13390|protein_coding|CODING|LOC_Os12g13390.3|6|1) FN1506-S.SNP.12:7490368 chr12:007490368 0 W/7490368-7490368 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. W138-2-1.SNP.12:7498583 chr12:007498583 0 W/7498583-7498583 W138-2-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN1302-S.SNP.12:7498991 chr12:007498991 0 W/7498991-7498991 FN1302-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN3110-S.SNP.12:7515062 chr12:007515062 0 W/7515062-7515062 FN3110-S SNP G -> C AC=1;AN=184;BQB=0.962717;DP=2492;DP4=1188,1229,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67007e-08;MQSB=0.83441;RPB=0.329294;SGB=53.2642;VDB=0.0538395;EFF=INTERGENIC(MODIFIER||||||||||1) FN1482-S.SNP.12:7519555 chr12:007519555 0 W/7519555-7519555 FN1482-S Single Base Substitution T-A INTERGENIC Homo SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN1415-S.SNP.12:7524508 chr12:007524508 0 W/7524508-7524508 FN1415-S Single Base Substitution A-G INTRON HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1415-S.SNP.12:7524574 chr12:007524574 0 W/7524574-7524574 FN1415-S Single Base Substitution G-C INTRON HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2267-S.SNP.12:7532384 chr12:007532384 0 W/7532384-7532384 FN2267-S SNP C -> T AC=1;AN=190;BQB=0.880627;DP=5187;DP4=2630,2217,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.7879e-09;MQSB=0.99735;RPB=0.420047;SGB=41.5369;VDB=0.707516;EFF=UTR_3_PRIME(MODIFIER||182||1673|LOC_Os12g13440|protein_coding|CODING|LOC_Os12g13440.2|12|1),UTR_3_PRIME(MODIFIER||182||1677|LOC_Os12g13440|protein_coding|CODING|LOC_Os12g13440.1|12|1) FN2221-S.SNP.12:7539377 chr12:007539377 0 W/7539377-7539377 FN2221-S SNP T -> G AC=1;AN=190;BQB=0.939054;DP=4286;DP4=1986,1830,9,17;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.07991e-09;MQSB=0.99715;RPB=0.506106;SGB=112.85;VDB=0.813349;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.12:7539645 chr12:007539645 0 W/7539645-7539645 FN950-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g13450 retrotransposon protein, putative, unclassified, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN4325-S.SNP.12:7544149 chr12:007544149 0 W/7544149-7544149 FN4325-S SNP G -> A AC=1;AN=170;BQB=0.430054;DP=1590;DP4=626,893,3,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00303721;MQSB=0.997724;RPB=0.283898;SGB=30.1021;VDB=0.457239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3039-S.SNP.12:7550816 chr12:007550816 0 W/7550816-7550816 FN3039-S SNP T -> A AC=1;AN=184;BQB=0.75448;DP=2903;DP4=1276,1554,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000344471;MQB=2.73036e-07;MQSB=0.953967;RPB=0.999126;SGB=35.7479;VDB=0.33395;EFF=INTRON(MODIFIER||||509|LOC_Os12g13460|protein_coding|CODING|LOC_Os12g13460.1|10|1) FN3491-S.SNP.12:7552677 chr12:007552677 0 W/7552677-7552677 FN3491-S SNP C -> T AC=1;AN=188;BQB=0.988668;DP=3107;DP4=1772,1270,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000321854;MQB=7.28751e-07;MQSB=0.986486;RPB=0.873806;SGB=39.8925;VDB=0.508632;EFF=INTRON(MODIFIER||||509|LOC_Os12g13460|protein_coding|CODING|LOC_Os12g13460.1|12|1) FN2495.SNP.12:7555467 chr12:007555467 0 W/7555467-7555467 FN2495 SNP G -> A AC=1;AN=200;BQB=0.224252;DP=4730;DP4=2167,2273,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.66087e-07;MQSB=0.981742;RPB=0.969825;SGB=-35.7104;VDB=0.856113;EFF=INTERGENIC(MODIFIER||||||||||1) FN947-S.SNP.12:7555684 chr12:007555684 0 W/7555684-7555684 FN947-S Single Base Substitution T-C INTERGENIC HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN-165.SNP.12:7556950 chr12:007556950 0 W/7556950-7556950 FN-165 Single Base Substitution C-A INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN2500.SNP.12:7560545 chr12:007560545 0 W/7560545-7560545 FN2500 SNP C -> T AC=1;AN=200;BQB=0.72138;DP=5103;DP4=2649,2176,14,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=7.70838e-08;MQSB=0.000530983;RPB=0.828519;SGB=83.5316;VDB=0.552964;EFF=INTERGENIC(MODIFIER||||||||||1) FN1249-S.SNP.12:7563072 chr12:007563072 0 W/7563072-7563072 FN1249-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1067, Mutant_ID: FN1249-S, Generation: M2, Mutations: 53, Genes: 94, Seed availability: Yes. FN2112-S.SNP.12:7564157 chr12:007564157 0 W/7564157-7564157 FN2112-S SNP G -> A AC=2;AN=168;BQB=0.917318;DP=3653;DP4=1745,1805,23,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.00164249;MQB=1.6002e-22;MQSB=0.445118;RPB=0.79955;SGB=45.6844;VDB=0.233045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.12:7577397 chr12:007577397 0 W/7577397-7577397 FN3840-S SNP A -> G AC=1;AN=190;BQB=0.985085;DP=2922;DP4=1348,1475,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.11092e-11;MQSB=0.700106;RPB=0.987031;SGB=80.9724;VDB=0.458107;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G89|102|LOC_Os12g13490|protein_coding|CODING|LOC_Os12g13490.1|3|1) FN-123.SNP.12:7585280 chr12:007585280 0 W/7585280-7585280 FN-123 Single Base Substitution T-C INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN1379-S.SNP.12:7591899 chr12:007591899 0 W/7591899-7591899 FN1379-S Single Base Substitution C-T INTERGENIC Homo SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN4206-S.SNP.12:7591899 chr12:007591899 0 W/7591899-7591899 FN4206-S SNP C -> T AC=2;AN=170;BQB=0.81229;DP=2571;DP4=1190,1245,10,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.78365e-11;MQSB=0.642342;RPB=0.580096;SGB=39.4251;VDB=0.0621949;EFF=INTERGENIC(MODIFIER||||||||||1) FN660-S.SNP.12:7592552 chr12:007592552 0 W/7592552-7592552 FN660-S Single Base Substitution G-A INTRON HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN3523-S.SNP.12:7595754 chr12:007595754 0 W/7595754-7595754 FN3523-S SNP A -> T AC=1;AN=188;BQB=0.923466;DP=2638;DP4=1222,1304,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0163002;MQB=0.00539993;MQSB=0.112276;RPB=0.998303;SGB=58.0655;VDB=0.468537;EFF=INTERGENIC(MODIFIER||||||||||1) FN414-S.SNP.12:7597021 chr12:007597021 0 W/7597021-7597021 FN414-S Single Base Substitution T-A INTERGENIC HET SNo: 413, Mutant_ID: FN414-S, Generation: M2, Mutations: 79, Genes: 46, Seed availability: No. FN1493-S.SNP.12:7597993 chr12:007597993 0 W/7597993-7597993 FN1493-S Single Base Substitution A-G INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1281-S.SNP.12:7601376 chr12:007601376 0 W/7601376-7601376 FN1281-S Single Base Substitution T-A INTERGENIC HET SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN2283.SNP.12:7611130 chr12:007611130 0 W/7611130-7611130 FN2283 SNP A -> G AC=2;AN=192;BQB=0.948771;DP=4563;DP4=1726,2336,43,32;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000219154;MQB=1.88828e-39;MQSB=0.58448;RPB=0.237834;SGB=205.047;VDB=0.807149;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggG|G94|108|LOC_Os12g13560|protein_coding|CODING|LOC_Os12g13560.1|1|1) FN1505-S.SNP.12:7618299 chr12:007618299 0 W/7618299-7618299 FN1505-S Single Base Substitution C-A INTRON HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2465.SNP.12:7622704 chr12:007622704 0 W/7622704-7622704 FN2465 SNP A -> C AC=1;AN=200;BQB=0.963016;DP=4463;DP4=2061,2176,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1471e-08;MQSB=0.990268;RPB=0.965649;SGB=33.0593;VDB=0.354736;EFF=INTRON(MODIFIER||||175|LOC_Os12g13580|protein_coding|CODING|LOC_Os12g13580.1|1|1) FN1746-S.SNP.12:7625510 chr12:007625510 0 W/7625510-7625510 FN1746-S SNP T -> C AC=1;AN=188;BQB=0.583569;DP=3602;DP4=1514,2056,13,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.60472e-06;MQSB=0.829444;RPB=0.633417;SGB=8.62479;VDB=0.712918;EFF=INTERGENIC(MODIFIER||||||||||1) FN1505-S.SNP.12:7641669 chr12:007641669 0 W/7641669-7641669 FN1505-S Single Base Substitution T-C INTRON HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN2140-S.SNP.12:7646688 chr12:007646688 0 W/7646688-7646688 FN2140-S SNP G -> T AC=1;AN=168;BQB=0.948581;DP=3752;DP4=1962,1741,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.71831e-13;MQSB=0.948791;RPB=0.685721;SGB=-42.3508;VDB=0.195733;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.12:7648535 chr12:007648535 0 W/7648535-7648535 FN1156-XA21 Single Base Substitution A-G INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN-109.SNP.12:7648994 chr12:007648994 0 W/7648994-7648994 FN-109 Single Base Substitution G-A INTERGENIC HET SNo: 109, Mutant_ID: FN-109, Generation: M2, Mutations: 60, Genes: 56, Seed availability: Yes. FN_N2-29a-1.SNP.12:7664667 chr12:007664667 0 W/7664667-7664667 FN_N2-29a-1 Single Base Substitution A-T Homo SNo: 1394, Mutant_ID: FN_N2-29a-1, Generation: M3, Mutations: 68, Genes: 50, Seed availability: Yes. FN-381.SNP.12:7667731 chr12:007667731 0 W/7667731-7667731 FN-381 Single Base Substitution T-A INTRON HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN-381.SNP.12:7667732 chr12:007667732 0 W/7667732-7667732 FN-381 Single Base Substitution T-A INTRON HET SNo: 369, Mutant_ID: FN-381, Generation: M2, Mutations: 42, Genes: 50, Seed availability: Yes. FN2765-S.SNP.12:7670314 chr12:007670314 0 W/7670314-7670314 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.813342;DP=4339;DP4=1769,2140,15,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.78942e-13;MQSB=0.878343;RPB=0.835222;SGB=25.3006;VDB=0.580415;EFF=INTERGENIC(MODIFIER||||||||||1) FN698-S.SNP.12:7674321 chr12:007674321 0 W/7674321-7674321 FN698-S Single Base Substitution T-C INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1723-S.SNP.12:7685252 chr12:007685252 0 W/7685252-7685252 FN1723-S SNP A -> C AC=1;AN=188;BQB=0.0411328;DP=3171;DP4=1487,1658,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.17282e-05;MQSB=0.993559;RPB=0.180319;SGB=-14.4565;VDB=0.230463;EFF=INTRON(MODIFIER||||1174|LOC_Os12g13660|protein_coding|CODING|LOC_Os12g13660.1|1|1) FN4235-S.SNP.12:7687437 chr12:007687437 0 W/7687437-7687437 FN4235-S SNP C -> T AC=1;AN=170;BQB=0.479838;DP=2266;DP4=988,1198,2,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.49921e-07;MQSB=0.850162;RPB=0.525394;SGB=14.9986;VDB=0.661179;EFF=INTERGENIC(MODIFIER||||||||||1) FN-181.SNP.12:7697343 chr12:007697343 0 W/7697343-7697343 FN-181 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g13670 expressed protein SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN1073-S.SNP.12:7705237 chr12:007705237 0 W/7705237-7705237 FN1073-S Single Base Substitution G-A INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN1073-S.SNP.12:7705739 chr12:007705739 0 W/7705739-7705739 FN1073-S Single Base Substitution T-C INTERGENIC HET SNo: 960, Mutant_ID: FN1073-S, Generation: M2, Mutations: 73, Genes: 25, Seed availability: Yes. FN-269.SNP.12:7711876 chr12:007711876 0 W/7711876-7711876 FN-269 Single Base Substitution T-C INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2674-S.SNP.12:7716830 chr12:007716830 0 W/7716830-7716830 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.999724;DP=4888;DP4=2246,2326,13,21;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.08509e-20;MQSB=0.939078;RPB=0.953213;SGB=112.373;VDB=0.781046;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.12:7720233 chr12:007720233 0 W/7720233-7720233 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2498.SNP.12:7730374 chr12:007730374 0 W/7730374-7730374 FN2498 SNP T -> C AC=1;AN=200;BQB=0.191757;DP=4943;DP4=2486,2127,19,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.94905e-20;MQSB=0.74272;RPB=0.999501;SGB=123.188;VDB=0.351402;EFF=INTERGENIC(MODIFIER||||||||||1) FN-265.SNP.12:7730614 chr12:007730614 0 W/7730614-7730614 FN-265 Single Base Substitution A-T INTERGENIC HET SNo: 264, Mutant_ID: FN-265, Generation: M2, Mutations: 63, Genes: 29, Seed availability: No. FN3880-S.SNP.12:7733155 chr12:007733155 0 W/7733155-7733155 FN3880-S SNP G -> A AC=1;AN=158;BQB=0.593327;DP=2531;DP4=1195,1258,8,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.30606e-09;MQSB=0.98755;RPB=0.869045;SGB=86.3921;VDB=0.633343;EFF=INTRON(MODIFIER||||1227|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.1|19|1) FN3543-S.SNP.12:7741020 chr12:007741020 0 W/7741020-7741020 FN3543-S SNP A -> G AC=1;AN=188;BQB=0.920827;DP=2488;DP4=1251,1152,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.07338e-06;MQSB=0.972603;RPB=0.697962;SGB=21.8113;VDB=0.507606;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F201|1227|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.1|8|1),SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F201|860|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.2|8|1) FN3857-S.SNP.12:7742721 chr12:007742721 0 W/7742721-7742721 FN3857-S SNP C -> T AC=2;AN=158;BQB=0.807608;DP=2302;DP4=1054,1161,11,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.85793e-13;MQSB=0.949989;RPB=0.996173;SGB=40.4048;VDB=0.100644;EFF=UTR_5_PRIME(MODIFIER||84||1227|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.1|4|1),UTR_5_PRIME(MODIFIER||84||860|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.2|4|1) FN2553-S.SNP.12:7742864 chr12:007742864 0 W/7742864-7742864 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.586935;DP=4268;DP4=1852,2219,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.90252e-06;MQSB=0.958691;RPB=0.621462;SGB=35.7638;VDB=0.507606;EFF=INTRON(MODIFIER||||1227|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.1|3|1),INTRON(MODIFIER||||860|LOC_Os12g13720|protein_coding|CODING|LOC_Os12g13720.2|3|1) FN2128-S.SNP.12:7746361 chr12:007746361 0 W/7746361-7746361 FN2128-S SNP T -> C AC=1;AN=168;BQB=0.70717;DP=4278;DP4=2106,2128,15,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.89769e-16;MQSB=0.99941;RPB=0.964171;SGB=-118.616;VDB=0.874398;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.12:7763454 chr12:007763454 0 W/7763454-7763454 FN1014-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN704-S.SNP.12:7766142 chr12:007766142 0 W/7766142-7766142 FN704-S Single Base Substitution A-T INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2261-S.SNP.12:7776666 chr12:007776666 0 W/7776666-7776666 FN2261-S SNP C -> T AC=1;AN=190;BQB=0.474918;DP=4189;DP4=1970,1844,31,19;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=3.31821e-18;MQSB=0.00765838;RPB=0.103267;SGB=58.4968;VDB=0.749516;EFF=INTERGENIC(MODIFIER||||||||||1) FN522-S.SNP.12:7780656 chr12:007780656 0 W/7780656-7780656 FN522-S Single Base Substitution C-T INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN555-S.SNP.12:7784166 chr12:007784166 0 W/7784166-7784166 FN555-S Single Base Substitution A-G INTRON HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1625-S.SNP.12:7785851 chr12:007785851 0 W/7785851-7785851 FN1625-S Single Base Substitution T-G INTERGENIC HET SNo: 1336, Mutant_ID: FN1625-S, Generation: M2, Mutations: 99, Genes: 39, Seed availability: Yes. FN1626-S.SNP.12:7785851 chr12:007785851 0 W/7785851-7785851 FN1626-S SNP T -> G AC=1;AN=188;BQB=0.686452;DP=2238;DP4=934,1271,4,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.82328e-10;MQSB=0.999539;RPB=0.999559;SGB=11.7114;VDB=0.986944;EFF=INTERGENIC(MODIFIER||||||||||1) FN2274-S.SNP.12:7789171 chr12:007789171 0 W/7789171-7789171 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.999049;DP=4855;DP4=2346,2213,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000411946;MQB=4.45269e-10;MQSB=0.0373046;RPB=0.797854;SGB=-11.5603;VDB=0.787738;EFF=INTERGENIC(MODIFIER||||||||||1) FN2751-S.SNP.12:7791765 chr12:007791765 0 W/7791765-7791765 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.897656;DP=5226;DP4=2422,2539,2,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00363567;MQB=5.19979e-05;MQSB=0.465528;RPB=0.490311;SGB=18.639;VDB=0.076945;EFF=INTRON(MODIFIER||||732|LOC_Os12g13780|protein_coding|CODING|LOC_Os12g13780.1|1|1) FN685-S.SNP.12:7794657 chr12:007794657 0 W/7794657-7794657 FN685-S Single Base Substitution C-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN4135-S.SNP.12:7802611 chr12:007802611 0 W/7802611-7802611 FN4135-S SNP T -> C AC=1;AN=182;BQB=0.9858;DP=3102;DP4=1578,1427,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.46831e-09;MQSB=0.999974;RPB=0.830756;SGB=46.1603;VDB=0.52348;EFF=INTRON(MODIFIER||||262|LOC_Os12g13800|protein_coding|CODING|LOC_Os12g13800.1|4|1) FN508-S.SNP.12:7811027 chr12:007811027 0 W/7811027-7811027 FN508-S Single Base Substitution C-T INTERGENIC HET SNo: 506, Mutant_ID: FN508-S, Generation: M2, Mutations: 52, Genes: 4, Seed availability: Yes. FN3452-S.SNP.12:7817698 chr12:007817698 0 W/7817698-7817698 FN3452-S SNP G -> A AC=1;AN=184;BQB=0.303527;DP=2654;DP4=1151,1395,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000687843;MQSB=0.915424;RPB=0.999216;SGB=8.14452;VDB=0.532922;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.12:7825060 chr12:007825060 0 W/7825060-7825060 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.676622;DP=2660;DP4=1082,1479,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.95418e-11;MQSB=0.86211;RPB=0.980801;SGB=80.9724;VDB=0.397665;EFF=UTR_5_PRIME(MODIFIER||43||183|LOC_Os12g13824|protein_coding|CODING|LOC_Os12g13824.1|1|1),UTR_5_PRIME(MODIFIER||43||183|LOC_Os12g13824|protein_coding|CODING|LOC_Os12g13824.2|1|1) FN3811-S.SNP.12:7825061 chr12:007825061 0 W/7825061-7825061 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.995581;DP=2660;DP4=1087,1428,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.85065e-12;MQSB=0.756888;RPB=0.998163;SGB=76.4186;VDB=0.399701;EFF=UTR_5_PRIME(MODIFIER||44||183|LOC_Os12g13824|protein_coding|CODING|LOC_Os12g13824.1|1|1),UTR_5_PRIME(MODIFIER||44||183|LOC_Os12g13824|protein_coding|CODING|LOC_Os12g13824.2|1|1) FN2149-S.SNP.12:7825627 chr12:007825627 0 W/7825627-7825627 FN2149-S SNP C -> T AC=1;AN=168;BQB=0.107013;DP=3330;DP4=1630,1668,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.11787e-07;MQSB=0.971211;RPB=0.983401;SGB=-87.7854;VDB=0.490692;EFF=INTERGENIC(MODIFIER||||||||||1) FN1154-S.SNP.12:7828593 chr12:007828593 0 W/7828593-7828593 FN1154-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1010, Mutant_ID: FN1154-S, Generation: M2, Mutations: 71, Genes: 14, Seed availability: Yes. FN779-S.SNP.12:7833998 chr12:007833998 0 W/7833998-7833998 FN779-S Single Base Substitution G-C INTERGENIC HET SNo: 700, Mutant_ID: FN779-S, Generation: M2, Mutations: 58, Genes: 186, Seed availability: Yes. FN4260-S.SNP.12:7839997 chr12:007839997 0 W/7839997-7839997 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.896226;DP=2557;DP4=1397,1096,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.71124e-06;MQSB=0.996654;RPB=0.282271;SGB=27.9928;VDB=0.0607471;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.12:7845866 chr12:007845866 0 W/7845866-7845866 FN870-S Single Base Substitution C-T INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. W463-2-1.SNP.12:7845879 chr12:007845879 0 W/7845879-7845879 W463-2-1 Single Base Substitution T-G INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN2734-S.SNP.12:7850533 chr12:007850533 0 W/7850533-7850533 FN2734-S SNP A -> T AC=1;AN=200;BQB=0.999109;DP=4857;DP4=2187,2432,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.53134e-14;MQSB=0.107922;RPB=0.879705;SGB=118.737;VDB=0.755531;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.12:7862766 chr12:007862766 0 W/7862766-7862766 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.206064;DP=4899;DP4=2428,2234,30,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00224536;MQB=1.51354e-20;MQSB=0.989659;RPB=0.000557727;SGB=-570.619;VDB=0.990194;EFF=INTERGENIC(MODIFIER||||||||||1) FN_831-4-1.SNP.12:7865309 chr12:007865309 0 W/7865309-7865309 FN_831-4-1 Single Base Substitution T-G HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN_788-1-1.SNP.12:7869749 chr12:007869749 0 W/7869749-7869749 FN_788-1-1 Single Base Substitution G-A Homo SNo: 1484, Mutant_ID: FN_788-1-1, Generation: M3, Mutations: 53, Genes: 7, Seed availability: No. FN3764-S.SNP.12:7871430 chr12:007871430 0 W/7871430-7871430 FN3764-S SNP G -> A AC=1;AN=190;BQB=0.771712;DP=3476;DP4=1910,1428,11,11;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.118527;MQB=0.603885;MQSB=3.03598e-37;RPB=0.998536;SGB=94.6341;VDB=0.679966;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q179*|926|LOC_Os12g13880|protein_coding|CODING|LOC_Os12g13880.1|1|1);LOF=(LOC_Os12g13880|LOC_Os12g13880|1|1.00);NMD=(LOC_Os12g13880|LOC_Os12g13880|1|1.00) FN-161.SNP.12:7873393 chr12:007873393 0 W/7873393-7873393 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN1310-S.SNP.12:7894609 chr12:007894609 0 W/7894609-7894609 FN1310-S Single Base Substitution C-A INTERGENIC HET SNo: 1115, Mutant_ID: FN1310-S, Generation: M2, Mutations: 50, Genes: 38, Seed availability: No. FN2564-S.SNP.12:7897516 chr12:007897516 0 W/7897516-7897516 FN2564-S SNP A -> T AC=1;AN=198;BQB=0.995907;DP=4303;DP4=1777,2311,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.21939e-07;MQSB=0.972783;RPB=0.742893;SGB=29.3637;VDB=0.0235444;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.12:7898297 chr12:007898297 0 W/7898297-7898297 FN4247-S SNP G -> T AC=1;AN=170;BQB=0.999899;DP=2299;DP4=911,1316,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.65174e-11;MQSB=0.980202;RPB=0.489922;SGB=78.9707;VDB=0.701121;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.12:7901600 chr12:007901600 0 W/7901600-7901600 FN-305 Single Base Substitution G-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-210.SNP.12:7903251 chr12:007903251 0 W/7903251-7903251 FN-210 Single Base Substitution A-T INTRON HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN947-S.SNP.12:7916419 chr12:007916419 0 W/7916419-7916419 FN947-S Single Base Substitution C-T INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN4312-S.SNP.12:7921727 chr12:007921727 0 W/7921727-7921727 FN4312-S SNP T -> C AC=1;AN=170;BQB=0.749134;DP=2668;DP4=1328,1274,8,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.15386e-09;MQSB=0.989259;RPB=0.893203;SGB=48.6486;VDB=0.77318;EFF=UTR_3_PRIME(MODIFIER||215||624|LOC_Os12g13950|protein_coding|CODING|LOC_Os12g13950.1|16|1) FN2797-S.SNP.12:7922678 chr12:007922678 0 W/7922678-7922678 FN2797-S SNP A -> C AC=2;AN=198;BQB=0.92895;DP=4309;DP4=2058,2013,20,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.02944e-20;MQSB=0.972659;RPB=0.976091;SGB=42.8469;VDB=0.0386395;EFF=INTRON(MODIFIER||||624|LOC_Os12g13950|protein_coding|CODING|LOC_Os12g13950.1|13|1) FN-191.SNP.12:7931543 chr12:007931543 0 W/7931543-7931543 FN-191 Single Base Substitution C-T INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN-191.SNP.12:7931544 chr12:007931544 0 W/7931544-7931544 FN-191 Single Base Substitution C-T INTERGENIC HOMO SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN1463-S.SNP.12:7933447 chr12:007933447 0 W/7933447-7933447 FN1463-S Single Base Substitution C-A INTERGENIC HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN3559-S.SNP.12:7937441 chr12:007937441 0 W/7937441-7937441 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.952447;DP=3045;DP4=1243,1729,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42979e-11;MQSB=0.976288;RPB=0.602649;SGB=67.8739;VDB=0.86467;EFF=INTERGENIC(MODIFIER||||||||||1) FN-64.SNP.12:7943006 chr12:007943006 0 W/7943006-7943006 FN-64 Single Base Substitution A-T INTERGENIC HET SNo: 64, Mutant_ID: FN-64, Generation: M2, Mutations: 36, Genes: 31, Seed availability: Yes. FN4143-S.SNP.12:7945064 chr12:007945064 0 W/7945064-7945064 FN4143-S SNP T -> C AC=1;AN=170;BQB=0.864009;DP=1762;DP4=808,863,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.15937e-06;MQSB=0.169547;RPB=0.949324;SGB=31.4354;VDB=0.134895;EFF=INTERGENIC(MODIFIER||||||||||1) FN468-S.SNP.12:7945105 chr12:007945105 0 W/7945105-7945105 FN468-S Single Base Substitution G-A INTERGENIC HOMO SNo: 467, Mutant_ID: FN468-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN511-S.SNP.12:7953887 chr12:007953887 0 W/7953887-7953887 FN511-S Single Base Substitution G-A INTRON HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-181.SNP.12:7955353 chr12:007955353 0 W/7955353-7955353 FN-181 Single Base Substitution T-C INTRON HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN3958-S.SNP.12:7957657 chr12:007957657 0 W/7957657-7957657 FN3958-S SNP C -> T AC=1;AN=168;BQB=0.982098;DP=3063;DP4=1170,1656,33,16;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00359125;MQB=1.67212e-25;MQSB=0;RPB=1.34307e-09;SGB=-1337.64;VDB=0.167662;EFF=INTERGENIC(MODIFIER||||||||||1) FN1656-S.SNP.12:7965012 chr12:007965012 0 W/7965012-7965012 FN1656-S Single Base Substitution A-T INTERGENIC HET SNo: 1358, Mutant_ID: FN1656-S, Generation: M2, Mutations: 83, Genes: 38, Seed availability: Yes. FN-269.SNP.12:7972787 chr12:007972787 0 W/7972787-7972787 FN-269 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g14050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3626-S.SNP.12:7978960 chr12:007978960 0 W/7978960-7978960 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.997991;DP=2884;DP4=1232,1526,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.93868e-07;MQSB=0.311516;RPB=0.997857;SGB=36.1006;VDB=0.946801;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.12:7984495 chr12:007984495 0 W/7984495-7984495 FN1014-S Single Base Substitution A-T INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN3330-S.SNP.12:7985107 chr12:007985107 0 W/7985107-7985107 FN3330-S SNP C -> A AC=2;AN=184;BQB=0.772125;DP=2724;DP4=1281,1344,12,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.07922e-10;MQSB=0.970178;RPB=0.989129;SGB=45.9712;VDB=0.984649;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.12:7988027 chr12:007988027 0 W/7988027-7988027 FN-377 Single Base Substitution A-C INTRON HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN1385-S.SNP.12:7999913 chr12:007999913 0 W/7999913-7999913 FN1385-S Single Base Substitution A-G INTRON HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3368-S.SNP.12:8006504 chr12:008006504 0 W/8006504-8006504 FN3368-S SNP T -> A AC=1;AN=184;BQB=0.804032;DP=2953;DP4=1397,1435,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.03871e-10;MQSB=0.873433;RPB=0.14568;SGB=12.8895;VDB=0.0115602;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.12:8008121 chr12:008008121 0 W/8008121-8008121 FN633-S Single Base Substitution C-A INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN633-S.SNP.12:8008123 chr12:008008123 0 W/8008123-8008123 FN633-S Single Base Substitution G-A INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3766-S.SNP.12:8022932 chr12:008022932 0 W/8022932-8022932 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.94706;DP=2883;DP4=1382,1405,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.15448e-05;MQSB=0.977683;RPB=0.964673;SGB=21.8853;VDB=0.646518;EFF=INTERGENIC(MODIFIER||||||||||1) FN2790-S.SNP.12:8028466 chr12:008028466 0 W/8028466-8028466 FN2790-S SNP T -> C AC=1;AN=198;BQB=0.986227;DP=4071;DP4=1713,2164,10,20;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14388e-14;MQSB=0.718371;RPB=0.761476;SGB=28.4908;VDB=0.154507;EFF=INTERGENIC(MODIFIER||||||||||1) FN1561-S.SNP.12:8032818 chr12:008032818 0 W/8032818-8032818 FN1561-S Single Base Substitution T-C INTRON HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN-129.SNP.12:8043445 chr12:008043445 0 W/8043445-8043445 FN-129 Single Base Substitution G-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-129.SNP.12:8043446 chr12:008043446 0 W/8043446-8043446 FN-129 Single Base Substitution C-T INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-245.SNP.12:8048623 chr12:008048623 0 W/8048623-8048623 FN-245 Single Base Substitution T-C INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3464-S.SNP.12:8055511 chr12:008055511 0 W/8055511-8055511 FN3464-S SNP G -> A AC=1;AN=184;BQB=0.0334634;DP=2986;DP4=1418,1475,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.03765;MQSB=0.176587;RPB=0.632913;SGB=21.6609;VDB=0.422291;EFF=INTRON(MODIFIER||||945|LOC_Os12g14180|protein_coding|CODING|LOC_Os12g14180.1|1|1) FN2595-S.SNP.12:8060514 chr12:008060514 0 W/8060514-8060514 FN2595-S SNP G -> A AC=1;AN=198;BQB=0.576378;DP=4022;DP4=2060,1781,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.0696171;MQB=0.953706;MQSB=0;RPB=0.776417;SGB=54.5295;VDB=0.986881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D330N|917|LOC_Os12g14190|protein_coding|CODING|LOC_Os12g14190.1|1|1) FN-408.SNP.12:8063608 chr12:008063608 0 W/8063608-8063608 FN-408 Single Base Substitution G-A INTERGENIC HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.12:8063608 chr12:008063608 0 W/8063608-8063608 FN408-S Single Base Substitution G-A INTERGENIC HET SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN_809-6-1.SNP.12:8067230 chr12:008067230 0 W/8067230-8067230 FN_809-6-1 Single Base Substitution T-A Homo LOC_Os12g14200 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN1757-S.SNP.12:8067252 chr12:008067252 0 W/8067252-8067252 FN1757-S SNP C -> T AC=1;AN=188;BQB=0.0710088;DP=2518;DP4=1451,1025,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=43;MQ0F=0.00476569;MQB=0.070628;MQSB=0.000238403;RPB=0.420385;SGB=-61.9025;VDB=0.919254;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P693L|981|LOC_Os12g14200|protein_coding|CODING|LOC_Os12g14200.1|3|1) FN2441.SNP.12:8072219 chr12:008072219 0 W/8072219-8072219 FN2441 SNP A -> T AC=1;AN=200;BQB=0.964943;DP=4748;DP4=2131,2278,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.74176e-12;MQSB=0.667541;RPB=0.768517;SGB=34.6953;VDB=0.511212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.12:8072224 chr12:008072224 0 W/8072224-8072224 FN2441 SNP T -> A AC=1;AN=200;BQB=0.9554;DP=4721;DP4=2163,2260,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12547e-11;MQSB=0.721154;RPB=0.93218;SGB=72.6852;VDB=0.386709;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.12:8084920 chr12:008084920 0 W/8084920-8084920 FN4300-S SNP A -> T AC=1;AN=170;BQB=0.897268;DP=2328;DP4=1136,1069,5,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.06694e-07;MQSB=0.978661;RPB=0.83904;SGB=34.878;VDB=0.750486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3369-S.SNP.12:8095658 chr12:008095658 0 W/8095658-8095658 FN3369-S SNP C -> A AC=1;AN=184;BQB=0.678203;DP=3352;DP4=1672,1589,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0199881;MQB=0.81958;MQSB=0.745041;RPB=0.811233;SGB=46.3132;VDB=0.897668;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q351K|876|LOC_Os12g14240|protein_coding|CODING|LOC_Os12g14240.1|2|1) FN916-S.SNP.12:8096039 chr12:008096039 0 W/8096039-8096039 FN916-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g14240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2792-S.SNP.12:8096573 chr12:008096573 0 W/8096573-8096573 FN2792-S SNP G -> A AC=1;AN=188;BQB=0.778503;DP=3584;DP4=1799,1589,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=8.69637e-05;MQSB=0.624607;RPB=0.641396;SGB=29.3637;VDB=0.0113588;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A642T|876|LOC_Os12g14240|protein_coding|CODING|LOC_Os12g14240.1|3|1) FN2729-S.SNP.12:8096864 chr12:008096864 0 W/8096864-8096864 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.264015;DP=4868;DP4=2221,2386,8,10;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0412901;MQB=0.533715;MQSB=0.18834;RPB=0.775189;SGB=54.6902;VDB=0.0781894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Ata|V739I|876|LOC_Os12g14240|protein_coding|CODING|LOC_Os12g14240.1|3|1) FN654-S.SNP.12:8097961 chr12:008097961 0 W/8097961-8097961 FN654-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN3311-S.SNP.12:8103762 chr12:008103762 0 W/8103762-8103762 FN3311-S SNP C -> T AC=1;AN=184;BQB=0.967951;DP=3755;DP4=1628,2013,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.00505992;MQB=0.0224977;MQSB=0.996555;RPB=0.993778;SGB=81.5311;VDB=0.307309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A116T|2027|LOC_Os12g14250|protein_coding|CODING|LOC_Os12g14250.1|1|1) FN1355-S.SNP.12:8106970 chr12:008106970 0 W/8106970-8106970 FN1355-S Single Base Substitution C-T INTERGENIC HET SNo: 1150, Mutant_ID: FN1355-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3517-S.SNP.12:8112667 chr12:008112667 0 W/8112667-8112667 FN3517-S SNP G -> A AC=1;AN=188;BQB=0.947312;DP=2803;DP4=1446,1247,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.22012e-05;MQSB=0.970418;RPB=0.719459;SGB=39.8925;VDB=0.505179;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.12:8116420 chr12:008116420 0 W/8116420-8116420 FN-82 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN4051-S.SNP.12:8116756 chr12:008116756 0 W/8116756-8116756 FN4051-S SNP C -> T AC=2;AN=168;BQB=0.929519;DP=3258;DP4=1486,1642,22,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.49906e-28;MQSB=0.98108;RPB=0.902223;SGB=161.688;VDB=0.14139;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I372|1807|LOC_Os12g14260|protein_coding|CODING|LOC_Os12g14260.1|2|1) FN2485.SNP.12:8122896 chr12:008122896 0 W/8122896-8122896 FN2485 SNP C -> A AC=1;AN=200;BQB=0.0487717;DP=4289;DP4=2083,1967,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03596e-05;MQSB=0.146066;RPB=0.656096;SGB=-14.3206;VDB=0.972327;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E472D|791|LOC_Os12g14270|protein_coding|CODING|LOC_Os12g14270.1|3|1) FN-153.SNP.12:8127530 chr12:008127530 0 W/8127530-8127530 FN-153 Single Base Substitution T-C INTERGENIC HET SNo: 153, Mutant_ID: FN-153, Generation: M2, Mutations: 55, Genes: 36, Seed availability: Yes. FN574-S.SNP.12:8130661 chr12:008130661 0 W/8130661-8130661 FN574-S Single Base Substitution A-T INTERGENIC HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN3479-S.SNP.12:8131743 chr12:008131743 0 W/8131743-8131743 FN3479-S SNP A -> C AC=1;AN=184;BQB=0.753219;DP=2654;DP4=1397,1153,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.30561e-08;MQSB=0.913734;RPB=0.91571;SGB=75.8731;VDB=0.177892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2091-S.SNP.12:8134000 chr12:008134000 0 W/8134000-8134000 FN2091-S SNP C -> T AC=2;AN=168;BQB=0.53109;DP=2825;DP4=1590,1159,28,25;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.60131e-21;MQSB=0.759825;RPB=0.999748;SGB=-52.8885;VDB=0.0364628;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P46S|596|LOC_Os12g14280|protein_coding|CODING|LOC_Os12g14280.1|2|1) FN2742-S.SNP.12:8140034 chr12:008140034 0 W/8140034-8140034 FN2742-S SNP T -> C AC=1;AN=200;BQB=0.234199;DP=5149;DP4=2411,2531,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.59601e-12;MQSB=0.959227;RPB=0.754098;SGB=81.8956;VDB=0.832201;EFF=INTRON(MODIFIER||||1436|LOC_Os12g14290|protein_coding|CODING|LOC_Os12g14290.1|7|1) FN956-S.SNP.12:8145972 chr12:008145972 0 W/8145972-8145972 FN956-S Single Base Substitution G-T INTERGENIC HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2702-S.SNP.12:8147260 chr12:008147260 0 W/8147260-8147260 FN2702-S SNP G -> A AC=1;AN=200;BQB=0.987642;DP=4972;DP4=2315,2424,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.24266e-06;MQSB=0.889003;RPB=0.646901;SGB=54.2646;VDB=0.366908;EFF=INTERGENIC(MODIFIER||||||||||1) FN3790-S.SNP.12:8150281 chr12:008150281 0 W/8150281-8150281 FN3790-S SNP A -> G AC=1;AN=188;BQB=0.999346;DP=2441;DP4=1251,1125,7,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.68473e-07;MQSB=0.790138;RPB=0.869312;SGB=44.5415;VDB=0.00958286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.12:8150775 chr12:008150775 0 W/8150775-8150775 FN2673-S SNP G -> A AC=1;AN=200;BQB=0.569297;DP=4887;DP4=2130,2530,13,13;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.117045;MQB=0.980251;MQSB=0;RPB=0.959625;SGB=83.5316;VDB=0.447513;EFF=INTERGENIC(MODIFIER||||||||||1) FN1606-S.SNP.12:8153564 chr12:008153564 0 W/8153564-8153564 FN1606-S Single Base Substitution G-T INTERGENIC HET SNo: 1325, Mutant_ID: FN1606-S, Generation: M2, Mutations: 104, Genes: 46, Seed availability: Yes. FN3529-S.SNP.12:8161148 chr12:008161148 0 W/8161148-8161148 FN3529-S SNP C -> T AC=2;AN=188;BQB=0.649539;DP=3288;DP4=1707,1456,6,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.66753e-09;MQSB=0.934932;RPB=0.910507;SGB=76.2387;VDB=0.1447;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.12:8164116 chr12:008164116 0 W/8164116-8164116 FN2611-S SNP C -> T AC=1;AN=200;BQB=0.652511;DP=4883;DP4=2346,2297,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.03435e-14;MQSB=0.828595;RPB=0.998446;SGB=69.1109;VDB=0.562631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T673I|938|LOC_Os12g14330|protein_coding|CODING|LOC_Os12g14330.1|2|1) FN840-S.SNP.12:8166978 chr12:008166978 0 W/8166978-8166978 FN840-S Single Base Substitution T-A INTERGENIC HET SNo: 751, Mutant_ID: FN840-S, Generation: M2, Mutations: 58, Genes: 68, Seed availability: Yes. FN-285.SNP.12:8168331 chr12:008168331 0 W/8168331-8168331 FN-285 Single Base Substitution G-T INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN-59.SNP.12:8168331 chr12:008168331 0 W/8168331-8168331 FN-59 Single Base Substitution G-T INTERGENIC HOMO SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN1278-S.SNP.12:8168331 chr12:008168331 0 W/8168331-8168331 FN1278-S Single Base Substitution G-T INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3450-S.SNP.12:8168331 chr12:008168331 0 W/8168331-8168331 FN3450-S SNP G -> T AC=2;AN=184;BQB=0.251797;DP=2528;DP4=1174,1284,9,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.51918e-07;MQSB=0.845517;RPB=0.71333;SGB=53.3568;VDB=0.42057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.12:8169001 chr12:008169001 0 W/8169001-8169001 FN3311-S SNP C -> T AC=1;AN=184;BQB=0.849324;DP=2381;DP4=1116,1183,13,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.26718e-11;MQSB=0.954497;RPB=0.476883;SGB=70.9657;VDB=0.150549;EFF=INTERGENIC(MODIFIER||||||||||1) FN2373.SNP.12:8171949 chr12:008171949 0 W/8171949-8171949 FN2373 SNP A -> G AC=2;AN=192;BQB=0.517697;DP=5220;DP4=2441,2413,30,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000191571;MQB=4.12616e-34;MQSB=0.97934;RPB=0.958365;SGB=141.745;VDB=0.505756;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.12:8174410 chr12:008174410 0 W/8174410-8174410 FN395-S Single Base Substitution G-A INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1667-S.SNP.12:8176219 chr12:008176219 0 W/8176219-8176219 FN1667-S SNP C -> T AC=1;AN=188;BQB=0.540344;DP=3860;DP4=1559,2264,5,16;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000259067;MQB=1.74381e-07;MQSB=0.892381;RPB=0.70625;SGB=-12.2833;VDB=0.969311;EFF=INTRON(MODIFIER||||1078|LOC_Os12g14360|protein_coding|CODING|LOC_Os12g14360.1|8|1) FN-13.SNP.12:8181001 chr12:008181001 0 W/8181001-8181001 FN-13 Single Base Substitution A-G INTRON HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN4234-S.SNP.12:8181674 chr12:008181674 0 W/8181674-8181674 FN4234-S SNP C -> T AC=1;AN=170;BQB=0.965367;DP=2501;DP4=1221,1216,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.08598e-05;MQSB=0.970082;RPB=0.228285;SGB=34.5445;VDB=0.0795038;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V69I|1078|LOC_Os12g14360|protein_coding|CODING|LOC_Os12g14360.1|1|1) FN1069-S.SNP.12:8187803 chr12:008187803 0 W/8187803-8187803 FN1069-S Single Base Substitution G-A INTERGENIC HOMO SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN-87.SNP.12:8189728 chr12:008189728 0 W/8189728-8189728 FN-87 Single Base Substitution A-T INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN4017-S.SNP.12:8191849 chr12:008191849 0 W/8191849-8191849 FN4017-S SNP A -> G AC=1;AN=168;BQB=0.941612;DP=2358;DP4=1285,989,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000424088;MQB=2.97321e-07;MQSB=0.435162;RPB=0.985865;SGB=41.6096;VDB=0.232431;EFF=INTERGENIC(MODIFIER||||||||||1) FN623-S.SNP.12:8197158 chr12:008197158 0 W/8197158-8197158 FN623-S Single Base Substitution C-A INTRON HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN3057-S.SNP.12:8198421 chr12:008198421 0 W/8198421-8198421 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.136508;DP=3592;DP4=1761,1679,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.34658e-07;MQSB=0.946633;RPB=0.853282;SGB=49.835;VDB=0.957685;EFF=INTRON(MODIFIER||||941|LOC_Os12g14374|protein_coding|CODING|LOC_Os12g14374.1|3|1) FN673-S.SNP.12:8199901 chr12:008199901 0 W/8199901-8199901 FN673-S Single Base Substitution A-T INTRON HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN4130-S.SNP.12:8202174 chr12:008202174 0 W/8202174-8202174 FN4130-S SNP G -> A AC=1;AN=182;BQB=0.940714;DP=2928;DP4=1501,1352,9,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.68079e-11;MQSB=0.853369;RPB=0.975855;SGB=33.1875;VDB=0.195752;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R727Q|941|LOC_Os12g14374|protein_coding|CODING|LOC_Os12g14374.1|6|1) FN4130-S.SNP.12:8202175 chr12:008202175 0 W/8202175-8202175 FN4130-S SNP G -> A AC=1;AN=182;BQB=0.888443;DP=2915;DP4=1493,1343,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.12298e-08;MQSB=0.895305;RPB=0.798443;SGB=49.6712;VDB=0.211414;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R727|941|LOC_Os12g14374|protein_coding|CODING|LOC_Os12g14374.1|6|1) FN2136-S.SNP.12:8208520 chr12:008208520 0 W/8208520-8208520 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.250202;DP=3154;DP4=1463,1637,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.48502e-08;MQSB=0.829891;RPB=0.577322;SGB=-66.4989;VDB=0.237822;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.12:8209694 chr12:008209694 0 W/8209694-8209694 FN3388-S SNP C -> T AC=1;AN=184;BQB=0.950371;DP=2986;DP4=1664,1210,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00167448;MQB=4.77636e-08;MQSB=0.801279;RPB=0.93864;SGB=46.3132;VDB=0.718985;EFF=INTERGENIC(MODIFIER||||||||||1) FN-163.SNP.12:8211596 chr12:008211596 0 W/8211596-8211596 FN-163 Single Base Substitution C-G INTRON HET SNo: 163, Mutant_ID: FN-163, Generation: M2, Mutations: 57, Genes: 43, Seed availability: Yes. FN2305.SNP.12:8212333 chr12:008212333 0 W/8212333-8212333 FN2305 SNP A -> T AC=1;AN=192;BQB=0.890819;DP=6004;DP4=2542,2812,19,24;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0231512;MQB=0.926035;MQSB=0.000133915;RPB=0.828746;SGB=-47.0904;VDB=0.236787;EFF=INTRON(MODIFIER||||652|LOC_Os12g14400|protein_coding|CODING|LOC_Os12g14400.1|1|1) FN4153-S.SNP.12:8215557 chr12:008215557 0 W/8215557-8215557 FN4153-S SNP C -> T AC=1;AN=170;BQB=0.715738;DP=2490;DP4=1414,986,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.28525e-06;MQSB=0.35565;RPB=0.566347;SGB=70.0854;VDB=0.384407;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R87Q|253|LOC_Os12g14410|protein_coding|CODING|LOC_Os12g14410.1|1|1) FN3553-S.SNP.12:8217216 chr12:008217216 0 W/8217216-8217216 FN3553-S SNP C -> A AC=1;AN=188;BQB=0.946928;DP=2792;DP4=1408,1317,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0232808;MQB=0.974206;MQSB=0.00117112;RPB=0.843996;SGB=30.8063;VDB=0.674881;EFF=INTRON(MODIFIER||||1225|LOC_Os12g14420|protein_coding|CODING|LOC_Os12g14420.1|1|1) FN2598-S.SNP.12:8218525 chr12:008218525 0 W/8218525-8218525 FN2598-S SNP G -> A AC=1;AN=186;BQB=0.593748;DP=3972;DP4=1882,1916,6,10;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.00352467;MQB=7.03936e-07;MQSB=0.999739;RPB=0.999993;SGB=26.7492;VDB=0.489158;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtA|V303|1225|LOC_Os12g14420|protein_coding|CODING|LOC_Os12g14420.1|2|1) FN3485-S.SNP.12:8223170 chr12:008223170 0 W/8223170-8223170 FN3485-S SNP G -> A AC=1;AN=184;BQB=0.819882;DP=3956;DP4=2302,1496,25,11;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.10996;MQB=0.115134;MQSB=0.936342;RPB=0.609631;SGB=76.2326;VDB=0.0856337;EFF=INTERGENIC(MODIFIER||||||||||1) FN3570-S.SNP.12:8225166 chr12:008225166 0 W/8225166-8225166 FN3570-S SNP A -> G AC=1;AN=188;BQB=0.992872;DP=2719;DP4=1361,1250,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.99602e-11;MQSB=0.990022;RPB=0.0410777;SGB=50.3161;VDB=0.103659;EFF=INTERGENIC(MODIFIER||||||||||1) FN3925-S.SNP.12:8226034 chr12:008226034 0 W/8226034-8226034 FN3925-S SNP G -> A AC=1;AN=158;BQB=0.98876;DP=2211;DP4=1024,1099,9,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.61404e-07;MQSB=0.999701;RPB=0.622128;SGB=55.806;VDB=0.162982;EFF=INTERGENIC(MODIFIER||||||||||1) FN875-S.SNP.12:8227429 chr12:008227429 0 W/8227429-8227429 FN875-S Single Base Substitution C-G INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN-129.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN-129 Single Base Substitution C-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-344.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN-344 Single Base Substitution C-A INTERGENIC HOMO SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN1067-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN1067-S Single Base Substitution C-A INTERGENIC HET SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1216-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN1216-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN3363-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN3363-S SNP C -> A AC=1;AN=184;BQB=0.98996;DP=3389;DP4=1870,1399,8,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.41503e-12;MQSB=0.936064;RPB=0.823805;SGB=40.9276;VDB=0.803253;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN3940-S SNP C -> A AC=1;AN=158;BQB=0.986215;DP=2642;DP4=1413,1111,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.83181e-10;MQSB=0.96567;RPB=0.0333955;SGB=50.9207;VDB=0.0838281;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN417-S Single Base Substitution C-A INTERGENIC HOMO SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN561-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN561-S Single Base Substitution C-A INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN619-S.SNP.12:8233157 chr12:008233157 0 W/8233157-8233157 FN619-S Single Base Substitution C-A INTERGENIC HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN1442-S.SNP.12:8234326 chr12:008234326 0 W/8234326-8234326 FN1442-S Single Base Substitution C-A INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN4190-S.SNP.12:8234341 chr12:008234341 0 W/8234341-8234341 FN4190-S SNP G -> T AC=1;AN=170;BQB=0.999703;DP=4261;DP4=2084,2020,9,14;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0;MQB=0.144994;MQSB=0.0125194;RPB=0.226078;SGB=14.431;VDB=0.805798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.12:8237857 chr12:008237857 0 W/8237857-8237857 FN3354-S SNP G -> A AC=1;AN=184;BQB=0.864581;DP=2671;DP4=1142,1434,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81105e-08;MQSB=0.676826;RPB=0.291452;SGB=62.3078;VDB=0.166692;EFF=INTERGENIC(MODIFIER||||||||||1) FN838-S.SNP.12:8241430 chr12:008241430 0 W/8241430-8241430 FN838-S Single Base Substitution C-T INTERGENIC HOMO SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN755-S.SNP.12:8244863 chr12:008244863 0 W/8244863-8244863 FN755-S Single Base Substitution A-T INTRON HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN755-S.SNP.12:8244864 chr12:008244864 0 W/8244864-8244864 FN755-S Single Base Substitution C-T INTRON HET SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN1122-S.SNP.12:8247080 chr12:008247080 0 W/8247080-8247080 FN1122-S Single Base Substitution A-G INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN_770-6-1.SNP.12:8247112 chr12:008247112 0 W/8247112-8247112 FN_770-6-1 Single Base Substitution T-C HET SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN2137-S.SNP.12:8248376 chr12:008248376 0 W/8248376-8248376 FN2137-S SNP G -> A AC=1;AN=168;BQB=0.563727;DP=2692;DP4=1476,1156,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0494056;MQB=0.996284;MQSB=0.129461;RPB=0.480244;SGB=38.1788;VDB=0.825299;EFF=INTERGENIC(MODIFIER||||||||||1) FN4074-S.SNP.12:8249673 chr12:008249673 0 W/8249673-8249673 FN4074-S SNP A -> G AC=1;AN=182;BQB=0.891715;DP=2046;DP4=889,987,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=0.000618785;MQSB=0.0605158;RPB=0.115315;SGB=2.12788;VDB=0.722159;EFF=INTERGENIC(MODIFIER||||||||||1) FN593-S.SNP.12:8251421 chr12:008251421 0 W/8251421-8251421 FN593-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g14460 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 577, Mutant_ID: FN593-S, Generation: M2, Mutations: 56, Genes: 14, Seed availability: Yes. FN2556-S.SNP.12:8252055 chr12:008252055 0 W/8252055-8252055 FN2556-S SNP G -> A AC=1;AN=198;BQB=0.999776;DP=4472;DP4=2180,2035,7,15;HOB=5.10152e-05;ICB=0.000102546;MQ=29;MQ0F=0.191413;MQB=0.99934;MQSB=3.82788e-06;RPB=0.968837;SGB=-10.8602;VDB=0.646705;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R923C|1429|LOC_Os12g14460|protein_coding|CODING|LOC_Os12g14460.1|2|1) FN940-S.SNP.12:8260057 chr12:008260057 0 W/8260057-8260057 FN940-S Single Base Substitution G-A INTERGENIC HET SNo: 846, Mutant_ID: FN940-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN2456.SNP.12:8261037 chr12:008261037 0 W/8261037-8261037 FN2456 SNP T -> C AC=1;AN=200;BQB=0.575484;DP=8876;DP4=4608,3449,17,21;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.000112663;MQB=1.79969e-12;MQSB=0.555353;RPB=0.0336565;SGB=-86.2071;VDB=0.167894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.12:8262360 chr12:008262360 0 W/8262360-8262360 FN3359-S SNP C -> T AC=1;AN=184;BQB=0.0146978;DP=4975;DP4=2346,2497,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.000216773;MQSB=0.874271;RPB=0.392054;SGB=3.75875;VDB=0.00160257;EFF=INTERGENIC(MODIFIER||||||||||1) FN1114-S.SNP.12:8263853 chr12:008263853 0 W/8263853-8263853 FN1114-S Single Base Substitution C-G INTERGENIC HET SNo: 986, Mutant_ID: FN1114-S, Generation: M2, Mutations: 77, Genes: 208, Seed availability: Yes. FN4134-S.SNP.12:8263938 chr12:008263938 0 W/8263938-8263938 FN4134-S SNP A -> T AC=1;AN=182;BQB=0.847339;DP=6706;DP4=3070,3389,6,6;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0;MQB=0.000130972;MQSB=0.815682;RPB=0.815449;SGB=32.1169;VDB=0.984242;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.12:8264352 chr12:008264352 0 W/8264352-8264352 FN-218 Single Base Substitution C-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN497-S.SNP.12:8264352 chr12:008264352 0 W/8264352-8264352 FN497-S Single Base Substitution C-T INTERGENIC HET SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1630-S.SNP.12:8264907 chr12:008264907 0 W/8264907-8264907 FN1630-S Single Base Substitution T-C INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3363-S.SNP.12:8266637 chr12:008266637 0 W/8266637-8266637 FN3363-S SNP C -> G AC=1;AN=184;BQB=0.996747;DP=5729;DP4=2578,2919,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.43969e-11;MQSB=0.999869;RPB=0.975275;SGB=60.4004;VDB=0.901679;EFF=INTRON(MODIFIER||||364|LOC_Os12g14480|protein_coding|CODING|LOC_Os12g14480.1|4|1) FN-275.SNP.12:8270532 chr12:008270532 0 W/8270532-8270532 FN-275 Single Base Substitution T-A INTERGENIC HET SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN4144-S.SNP.12:8270906 chr12:008270906 0 W/8270906-8270906 FN4144-S SNP T -> G AC=1;AN=170;BQB=0.992885;DP=2592;DP4=1320,1109,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=4.0427e-05;MQSB=0.998286;RPB=0.851625;SGB=34.878;VDB=0.305236;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.12:8273338 chr12:008273338 0 W/8273338-8273338 FN2721-S SNP C -> T AC=2;AN=200;BQB=0.318743;DP=5078;DP4=2819,1958,14,15;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0.00177235;MQB=2.81627e-13;MQSB=4.14931e-08;RPB=0.278072;SGB=94.3471;VDB=0.988854;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A197|452|LOC_Os12g14490|protein_coding|CODING|LOC_Os12g14490.1|2|1) FN1335-S.SNP.12:8273444 chr12:008273444 0 W/8273444-8273444 FN1335-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g14490 retrotransposon protein, putative, unclassified SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN-380.SNP.12:8283778 chr12:008283778 0 W/8283778-8283778 FN-380 Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g14510 expressed protein SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN935-S.SNP.12:8285142 chr12:008285142 0 W/8285142-8285142 FN935-S Single Base Substitution A-T INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN2598-S.SNP.12:8289956 chr12:008289956 0 W/8289956-8289956 FN2598-S SNP C -> A AC=1;AN=186;BQB=0.592157;DP=3615;DP4=1856,1460,10,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.42898e-09;MQSB=0.255706;RPB=0.421348;SGB=65.3149;VDB=0.788869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1234-S.SNP.12:8290436 chr12:008290436 0 W/8290436-8290436 FN1234-S Single Base Substitution G-A INTERGENIC HET SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1615-S.SNP.12:8291212 chr12:008291212 0 W/8291212-8291212 FN1615-S Single Base Substitution G-A INTERGENIC HET SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN-164.SNP.12:8292296 chr12:008292296 0 W/8292296-8292296 FN-164 Single Base Substitution A-T INTERGENIC HOMO SNo: 164, Mutant_ID: FN-164, Generation: M2, Mutations: 79, Genes: 64, Seed availability: Yes. FN2242-S.SNP.12:8305684 chr12:008305684 0 W/8305684-8305684 FN2242-S SNP G -> C AC=1;AN=190;BQB=0.779338;DP=4729;DP4=2226,2204,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.06836e-09;MQSB=0.969778;RPB=0.990043;SGB=11.8805;VDB=0.941569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.12:8306219 chr12:008306219 0 W/8306219-8306219 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.948964;DP=4294;DP4=1932,2000,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.92498e-09;MQSB=0.0519437;RPB=0.938531;SGB=31.9395;VDB=0.935439;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.12:8308138 chr12:008308138 0 W/8308138-8308138 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.999867;DP=5201;DP4=2572,2347,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.63627e-11;MQSB=0.536476;RPB=0.817119;SGB=-11.2947;VDB=0.3793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.12:8312248 chr12:008312248 0 W/8312248-8312248 FN3339-S SNP T -> A AC=2;AN=184;BQB=0.471977;DP=3210;DP4=1511,1436,11,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000934579;MQB=3.7934e-10;MQSB=0.521175;RPB=0.8151;SGB=-10.0179;VDB=0.29715;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.12:8313650 chr12:008313650 0 W/8313650-8313650 FN799-S Single Base Substitution C-T INTERGENIC HET SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN690-S.SNP.12:8314321 chr12:008314321 0 W/8314321-8314321 FN690-S Single Base Substitution T-A INTERGENIC HET SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN-201.SNP.12:8319561 chr12:008319561 0 W/8319561-8319561 FN-201 Single Base Substitution C-A INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN2729-S.SNP.12:8324054 chr12:008324054 0 W/8324054-8324054 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.95464;DP=4968;DP4=2644,2032,16,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000201288;MQB=1.31168e-13;MQSB=0.836964;RPB=0.834476;SGB=-6.45336;VDB=0.761329;EFF=INTERGENIC(MODIFIER||||||||||1) FN3786-S.SNP.12:8329019 chr12:008329019 0 W/8329019-8329019 FN3786-S SNP G -> C AC=1;AN=190;BQB=0.760195;DP=2929;DP4=1394,1358,3,14;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.66371e-05;MQSB=0.948676;RPB=0.999425;SGB=71.8647;VDB=0.731364;EFF=INTRON(MODIFIER||||310|LOC_Os12g14580|protein_coding|CODING|LOC_Os12g14580.1|1|1) FN1515-S.SNP.12:8337924 chr12:008337924 0 W/8337924-8337924 FN1515-S Single Base Substitution C-T INTERGENIC HET SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2276-S.SNP.12:8338406 chr12:008338406 0 W/8338406-8338406 FN2276-S SNP C -> G AC=1;AN=190;BQB=0.91237;DP=3138;DP4=1675,1077,10,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.6173e-10;MQSB=3.57029e-08;RPB=0.964711;SGB=41.5369;VDB=0.847178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2121-S.SNP.12:8342307 chr12:008342307 0 W/8342307-8342307 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.391758;DP=3018;DP4=1561,1412,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.77833e-08;MQSB=0.903146;RPB=0.719174;SGB=-13.2184;VDB=0.991113;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T372|485|LOC_Os12g14610|protein_coding|CODING|LOC_Os12g14610.1|6|1) FN2136-S.SNP.12:8350435 chr12:008350435 0 W/8350435-8350435 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.220539;DP=3912;DP4=1800,2003,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.67128e-07;MQSB=0.0162663;RPB=0.232581;SGB=55.3328;VDB=0.175985;EFF=INTERGENIC(MODIFIER||||||||||1) FN2410.SNP.12:8357124 chr12:008357124 0 W/8357124-8357124 FN2410 SNP G -> T AC=1;AN=200;BQB=0.673852;DP=4320;DP4=2080,2006,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.03184e-12;MQSB=0.941811;RPB=0.973297;SGB=100.316;VDB=0.221489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L577I|579|LOC_Os12g14630|protein_coding|CODING|LOC_Os12g14630.1|5|1) FN2467.SNP.12:8361672 chr12:008361672 0 W/8361672-8361672 FN2467 SNP G -> C AC=1;AN=200;BQB=0.780365;DP=4686;DP4=2119,2293,13,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.22582e-16;MQSB=0.907098;RPB=0.550216;SGB=141.763;VDB=0.737687;EFF=INTRON(MODIFIER||||579|LOC_Os12g14630|protein_coding|CODING|LOC_Os12g14630.1|1|1) FN-217.SNP.12:8362675 chr12:008362675 0 W/8362675-8362675 FN-217 Single Base Substitution G-A INTERGENIC HOMO SNo: 216, Mutant_ID: FN-217, Generation: M2, Mutations: 61, Genes: 7, Seed availability: Yes. FN-87.SNP.12:8362675 chr12:008362675 0 W/8362675-8362675 FN-87 Single Base Substitution G-A INTERGENIC HOMO SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1719-S.SNP.12:8362675 chr12:008362675 0 W/8362675-8362675 FN1719-S SNP G -> A AC=2;AN=188;BQB=0.38245;DP=3165;DP4=2170,953,21,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.21372e-12;MQSB=0.485504;RPB=0.308097;SGB=-9.02352;VDB=0.858121;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.12:8362675 chr12:008362675 0 W/8362675-8362675 FN666-S Single Base Substitution G-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3743-S.SNP.12:8369174 chr12:008369174 0 W/8369174-8369174 FN3743-S SNP T -> C AC=1;AN=188;BQB=0.889321;DP=2867;DP4=1431,1331,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.49904e-10;MQSB=0.896361;RPB=0.574137;SGB=62.7569;VDB=0.811578;EFF=INTRON(MODIFIER||||705|LOC_Os12g14640|protein_coding|CODING|LOC_Os12g14640.1|3|1) FN3523-S.SNP.12:8372621 chr12:008372621 0 W/8372621-8372621 FN3523-S SNP C -> T AC=1;AN=188;BQB=0.977994;DP=2819;DP4=1289,1485,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000354736;MQB=5.71616e-06;MQSB=0.862852;RPB=0.607132;SGB=44.4357;VDB=0.127221;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P678L|705|LOC_Os12g14640|protein_coding|CODING|LOC_Os12g14640.1|6|1) FN2753-S.SNP.12:8373141 chr12:008373141 0 W/8373141-8373141 FN2753-S SNP C -> G AC=1;AN=200;BQB=0.361773;DP=4874;DP4=2219,2388,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.95037e-08;MQSB=0.871292;RPB=0.440762;SGB=21.6694;VDB=0.834076;EFF=INTERGENIC(MODIFIER||||||||||1) FN-200.SNP.12:8376825 chr12:008376825 0 W/8376825-8376825 FN-200 Single Base Substitution G-T INTRON HOMO SNo: 200, Mutant_ID: FN-200, Generation: M2, Mutations: 55, Genes: 42, Seed availability: Yes. FN4082-S.SNP.12:8377330 chr12:008377330 0 W/8377330-8377330 FN4082-S SNP C -> T AC=1;AN=182;BQB=0.788534;DP=3014;DP4=1503,1448,12,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.19129e-10;MQSB=0.978094;RPB=0.926443;SGB=93.7308;VDB=0.907572;EFF=INTRON(MODIFIER||||841|LOC_Os12g14650|protein_coding|CODING|LOC_Os12g14650.1|3|1) FN1475-S.SNP.12:8377680 chr12:008377680 0 W/8377680-8377680 FN1475-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN3424-S.SNP.12:8378194 chr12:008378194 0 W/8378194-8378194 FN3424-S SNP C -> A AC=1;AN=184;BQB=0.991623;DP=2683;DP4=1238,1369,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.81422e-07;MQSB=0.903183;RPB=0.354694;SGB=44.2207;VDB=0.772939;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L718M|841|LOC_Os12g14650|protein_coding|CODING|LOC_Os12g14650.1|5|1) FN2684-S.SNP.12:8379405 chr12:008379405 0 W/8379405-8379405 FN2684-S SNP T -> A AC=1;AN=200;BQB=0.997365;DP=2640;DP4=1926,520,13,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.28244e-08;MQSB=0.230353;RPB=0.99676;SGB=-15.5309;VDB=0.553255;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.12:8384926 chr12:008384926 0 W/8384926-8384926 FN-133 Single Base Substitution G-A INTERGENIC HOMO SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN3057-S.SNP.12:8389521 chr12:008389521 0 W/8389521-8389521 FN3057-S SNP A -> G AC=1;AN=184;BQB=0.956072;DP=2344;DP4=1264,1000,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07998e-08;MQSB=0.924459;RPB=0.518412;SGB=53.2642;VDB=0.87894;EFF=INTERGENIC(MODIFIER||||||||||1) FN1513-S.SNP.12:8390204 chr12:008390204 0 W/8390204-8390204 FN1513-S Single Base Substitution G-T INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN3839-S.SNP.12:8391730 chr12:008391730 0 W/8391730-8391730 FN3839-S SNP T -> C AC=1;AN=190;BQB=0.996644;DP=2837;DP4=1119,1534,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.51415e-13;MQSB=0.979747;RPB=0.438042;SGB=-38.5551;VDB=0.0779427;EFF=INTERGENIC(MODIFIER||||||||||1) FN-286.SNP.12:8405468 chr12:008405468 0 W/8405468-8405468 FN-286 Single Base Substitution T-C INTERGENIC HET SNo: 282, Mutant_ID: FN-286, Generation: M2, Mutations: 68, Genes: 50, Seed availability: Yes. FN4094-S.SNP.12:8405630 chr12:008405630 0 W/8405630-8405630 FN4094-S SNP C -> T AC=1;AN=182;BQB=0.997176;DP=2719;DP4=1289,1375,8,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.80266e-09;MQSB=0.999385;RPB=0.739949;SGB=57.644;VDB=0.966866;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D266N|289|LOC_Os12g14680|protein_coding|CODING|LOC_Os12g14680.1|3|1) FN-151.SNP.12:8405745 chr12:008405745 0 W/8405745-8405745 FN-151 Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN-151.SNP.12:8405746 chr12:008405746 0 W/8405746-8405746 FN-151 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g14680 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN3479-S.SNP.12:8411404 chr12:008411404 0 W/8411404-8411404 FN3479-S SNP T -> C AC=1;AN=184;BQB=0.680352;DP=2769;DP4=1323,1360,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000152325;MQSB=0.999462;RPB=0.370392;SGB=25.1826;VDB=0.635404;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Gaa|K323E|654|LOC_Os12g14699|protein_coding|CODING|LOC_Os12g14699.1|6|1) FN2174-S.SNP.12:8411898 chr12:008411898 0 W/8411898-8411898 FN2174-S SNP A -> C AC=1;AN=168;BQB=0.00506856;DP=3840;DP4=1733,2057,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.07965e-05;MQSB=0.964851;RPB=0.865666;SGB=-105.072;VDB=0.586414;EFF=INTRON(MODIFIER||||654|LOC_Os12g14699|protein_coding|CODING|LOC_Os12g14699.1|5|1) FN2179-S.SNP.12:8412571 chr12:008412571 0 W/8412571-8412571 FN2179-S SNP T -> A AC=1;AN=168;BQB=0.0686743;DP=2515;DP4=1237,1233,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00250751;MQSB=0.968978;RPB=0.0535128;SGB=-17.0958;VDB=0.123939;EFF=INTRON(MODIFIER||||654|LOC_Os12g14699|protein_coding|CODING|LOC_Os12g14699.1|5|1) FN4041-S.SNP.12:8413686 chr12:008413686 0 W/8413686-8413686 FN4041-S SNP G -> T AC=1;AN=168;BQB=0.99566;DP=2720;DP4=1361,1252,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.13655e-07;MQSB=0.822572;RPB=0.99956;SGB=56.6036;VDB=0.399491;EFF=INTRON(MODIFIER||||654|LOC_Os12g14699|protein_coding|CODING|LOC_Os12g14699.1|5|1) FN2254-S.SNP.12:8421537 chr12:008421537 0 W/8421537-8421537 FN2254-S SNP C -> T AC=2;AN=190;BQB=0.402205;DP=4274;DP4=1900,2047,16,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.57937e-12;MQSB=0.00170251;RPB=0.227801;SGB=103.742;VDB=0.43429;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.12:8421537 chr12:008421537 0 W/8421537-8421537 FN2342 SNP C -> T AC=2;AN=192;BQB=0.680186;DP=4472;DP4=2042,2108,20,25;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.72795e-23;MQSB=0.275601;RPB=0.26718;SGB=199.834;VDB=0.10459;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.12:8421537 chr12:008421537 0 W/8421537-8421537 FN2433 SNP C -> T AC=1;AN=200;BQB=0.732219;DP=4354;DP4=2032,2038,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1248e-06;MQSB=0.113206;RPB=0.758633;SGB=49.6594;VDB=0.604147;EFF=INTERGENIC(MODIFIER||||||||||1) FN4071-S.SNP.12:8421537 chr12:008421537 0 W/8421537-8421537 FN4071-S SNP C -> T AC=2;AN=182;BQB=0.97539;DP=3180;DP4=1646,1441,17,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=6.08905e-16;MQSB=0.973146;RPB=0.983598;SGB=125.307;VDB=0.850057;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.12:8421812 chr12:008421812 0 W/8421812-8421812 FN3865-S SNP G -> A AC=2;AN=158;BQB=0.917532;DP=2879;DP4=1374,1408,14,18;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.08885e-17;MQSB=0.961488;RPB=0.952415;SGB=98.093;VDB=0.905923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1252-S.SNP.12:8422821 chr12:008422821 0 W/8422821-8422821 FN1252-S Single Base Substitution C-T INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN3830-S.SNP.12:8434952 chr12:008434952 0 W/8434952-8434952 FN3830-S SNP T -> C AC=1;AN=190;BQB=0.937978;DP=2694;DP4=1322,1171,7,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.1152e-11;MQSB=0.940717;RPB=0.939797;SGB=41.5369;VDB=0.0372564;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.12:8435774 chr12:008435774 0 W/8435774-8435774 FN1368-S Single Base Substitution C-T INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN702-S.SNP.12:8437833 chr12:008437833 0 W/8437833-8437833 FN702-S Single Base Substitution C-T INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN574-S.SNP.12:8439387 chr12:008439387 0 W/8439387-8439387 FN574-S Single Base Substitution A-T INTRON HET SNo: 564, Mutant_ID: FN574-S, Generation: M2, Mutations: 58, Genes: 9, Seed availability: Yes. FN-261.SNP.12:8445715 chr12:008445715 0 W/8445715-8445715 FN-261 Single Base Substitution T-G INTERGENIC HOMO SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN3332-S.SNP.12:8446108 chr12:008446108 0 W/8446108-8446108 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.970405;DP=2516;DP4=1258,1177,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.99509e-08;MQSB=0.598209;RPB=0.992484;SGB=62.3078;VDB=0.922012;EFF=INTERGENIC(MODIFIER||||||||||1) FN3551-S.SNP.12:8446599 chr12:008446599 0 W/8446599-8446599 FN3551-S SNP G -> A AC=2;AN=188;BQB=0.645401;DP=3177;DP4=1942,1138,12,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000314762;MQB=4.41199e-08;MQSB=0.996971;RPB=0.858833;SGB=53.7007;VDB=0.401084;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.12:8456397 chr12:008456397 0 W/8456397-8456397 FN3859-S SNP A -> G AC=1;AN=158;BQB=0.775884;DP=2363;DP4=1199,1032,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=35;MQ0F=0.150656;MQB=0.975422;MQSB=5.17578e-09;RPB=0.99068;SGB=20.5959;VDB=0.26558;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Ggc|S500G|943|LOC_Os12g14780|protein_coding|CODING|LOC_Os12g14780.1|3|1) FN2684-S.SNP.12:8457282 chr12:008457282 0 W/8457282-8457282 FN2684-S SNP G -> A AC=1;AN=200;BQB=0.614235;DP=4656;DP4=2157,2270,4,16;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0438144;MQB=0.599466;MQSB=2.6113e-17;RPB=0.988756;SGB=86.5007;VDB=0.492553;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G795R|943|LOC_Os12g14780|protein_coding|CODING|LOC_Os12g14780.1|3|1) FN2645-S.SNP.12:8462363 chr12:008462363 0 W/8462363-8462363 FN2645-S SNP T -> G AC=1;AN=200;BQB=0.864401;DP=10730;DP4=5286,4014,25,24;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.0988816;MQB=0.00357238;MQSB=0;RPB=0.167019;SGB=-262.351;VDB=0.383246;EFF=INTERGENIC(MODIFIER||||||||||1) FN1413-S.SNP.12:8463046 chr12:008463046 0 W/8463046-8463046 FN1413-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN3560-S.SNP.12:8464258 chr12:008464258 0 W/8464258-8464258 FN3560-S SNP G -> T AC=1;AN=188;BQB=0.990094;DP=3296;DP4=1781,1433,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0385316;MQB=0.896808;MQSB=0.0546193;RPB=0.177659;SGB=58.0655;VDB=0.406196;EFF=INTRON(MODIFIER||||1727|LOC_Os12g14800|protein_coding|CODING|LOC_Os12g14800.1|1|1) FN1318-S.SNP.12:8467357 chr12:008467357 0 W/8467357-8467357 FN1318-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g14800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN4167-S.SNP.12:8483052 chr12:008483052 0 W/8483052-8483052 FN4167-S SNP T -> C AC=2;AN=170;BQB=0.989816;DP=2593;DP4=1268,1151,13,11;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.30535e-12;MQSB=0.871985;RPB=0.970981;SGB=101.184;VDB=0.907668;EFF=INTERGENIC(MODIFIER||||||||||1) FN2153-S.SNP.12:8486405 chr12:008486405 0 W/8486405-8486405 FN2153-S SNP T -> C AC=1;AN=168;BQB=0.00770499;DP=2453;DP4=1008,1394,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000251953;MQSB=0.859098;RPB=0.830844;SGB=-97.9335;VDB=0.831558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.12:8487336 chr12:008487336 0 W/8487336-8487336 FN1230-S Single Base Substitution A-G INTRON HET SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN2688-S.SNP.12:8491701 chr12:008491701 0 W/8491701-8491701 FN2688-S SNP C -> A AC=1;AN=200;BQB=0.392513;DP=5397;DP4=2815,2298,9,3;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00833797;MQB=8.52906e-05;MQSB=1.1454e-07;RPB=0.816638;SGB=-0.141083;VDB=0.903477;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.12:8492880 chr12:008492880 0 W/8492880-8492880 FN3343-S SNP T -> C AC=1;AN=184;BQB=0.851137;DP=3041;DP4=1441,1485,7,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.25834e-08;MQSB=0.999111;RPB=0.923339;SGB=57.786;VDB=0.224506;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.12:8504470 chr12:008504470 0 W/8504470-8504470 FN2530-S SNP G -> A AC=1;AN=198;BQB=0.656185;DP=4023;DP4=1982,1798,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.49643e-12;MQSB=0.30669;RPB=0.971569;SGB=39.7248;VDB=0.139037;EFF=INTERGENIC(MODIFIER||||||||||1) FN493-S.SNP.12:8507304 chr12:008507304 0 W/8507304-8507304 FN493-S Single Base Substitution T-A INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-119.SNP.12:8511309 chr12:008511309 0 W/8511309-8511309 FN-119 Single Base Substitution C-G INTERGENIC HET SNo: 119, Mutant_ID: FN-119, Generation: M2, Mutations: 49, Genes: 6, Seed availability: Yes. FN3523-S.SNP.12:8512921 chr12:008512921 0 W/8512921-8512921 FN3523-S SNP C -> G AC=1;AN=188;BQB=0.919485;DP=3681;DP4=1959,1631,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.0391198;MQB=0.057784;MQSB=3.03945e-13;RPB=0.560828;SGB=53.5223;VDB=0.393131;EFF=INTERGENIC(MODIFIER||||||||||1) FN1557-S.SNP.12:8513470 chr12:008513470 0 W/8513470-8513470 FN1557-S Single Base Substitution C-T INTERGENIC HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN2082-S.SNP.12:8514016 chr12:008514016 0 W/8514016-8514016 FN2082-S SNP G -> A AC=1;AN=168;BQB=0.827738;DP=1353;DP4=745,572,6,3;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0628234;MQB=0.707453;MQSB=0.568341;RPB=0.746227;SGB=21.0249;VDB=0.571577;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G43R|142|LOC_Os12g14870|protein_coding|CODING|LOC_Os12g14870.1|1|1) FN2612-S.SNP.12:8514810 chr12:008514810 0 W/8514810-8514810 FN2612-S SNP G -> T AC=1;AN=194;BQB=0.919797;DP=2950;DP4=1247,1543,2,8;HOB=5.31406e-05;ICB=0.000106829;MQ=36;MQ0F=0.0925424;MQB=0.978063;MQSB=5.53022e-38;RPB=0.91297;SGB=25.7687;VDB=0.206708;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.12:8531678 chr12:008531678 0 W/8531678-8531678 FN1470-S Single Base Substitution C-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN2461.SNP.12:8536028 chr12:008536028 0 W/8536028-8536028 FN2461 SNP G -> A AC=1;AN=200;BQB=0.527418;DP=4742;DP4=2351,2174,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.14937e-10;MQSB=0.791997;RPB=0.612875;SGB=32.0901;VDB=0.595453;EFF=INTERGENIC(MODIFIER||||||||||1) FN1444-S.SNP.12:8540836 chr12:008540836 0 W/8540836-8540836 FN1444-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g14930 ATP synthase protein MI25, putative, expressed SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN-172.SNP.12:8545260 chr12:008545260 0 W/8545260-8545260 FN-172 Single Base Substitution A-G INTERGENIC HET SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN-234.SNP.12:8546455 chr12:008546455 0 W/8546455-8546455 FN-234 Single Base Substitution C-T INTERGENIC HOMO SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN810-S.SNP.12:8559842 chr12:008559842 0 W/8559842-8559842 FN810-S Single Base Substitution T-C INTERGENIC HOMO SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2171-S.SNP.12:8577216 chr12:008577216 0 W/8577216-8577216 FN2171-S SNP G -> T AC=1;AN=168;BQB=0.57487;DP=3718;DP4=1925,1761,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000268962;MQB=3.37572e-06;MQSB=0.214123;RPB=0.625959;SGB=-37.7974;VDB=0.558334;EFF=INTRON(MODIFIER||||737|LOC_Os12g15010|protein_coding|CODING|LOC_Os12g15010.1|5|1) FN3883-S.SNP.12:8580048 chr12:008580048 0 W/8580048-8580048 FN3883-S SNP C -> T AC=2;AN=158;BQB=0.645733;DP=2694;DP4=1201,1399,16,13;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.28388e-18;MQSB=0.962309;RPB=0.890794;SGB=121.348;VDB=0.796971;EFF=INTERGENIC(MODIFIER||||||||||1) FN3902-S.SNP.12:8581098 chr12:008581098 0 W/8581098-8581098 FN3902-S SNP A -> T AC=2;AN=158;BQB=0.990617;DP=2381;DP4=1120,1148,13,14;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=4.26913e-14;MQSB=0.971993;RPB=0.391222;SGB=112.609;VDB=0.0318159;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.12:8594243 chr12:008594243 0 W/8594243-8594243 FN3626-S SNP G -> A AC=1;AN=188;BQB=0.294205;DP=2861;DP4=1455,1317,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00415098;MQSB=0.994214;RPB=0.524166;SGB=35.4339;VDB=0.472523;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q831*|914|LOC_Os12g15060|protein_coding|CODING|LOC_Os12g15060.1|8|1) FN1327-S.SNP.12:8599564 chr12:008599564 0 W/8599564-8599564 FN1327-S Single Base Substitution A-G INTRON HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN920-S.SNP.12:8600264 chr12:008600264 0 W/8600264-8600264 FN920-S Single Base Substitution A-G INTRON HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN1481-S.SNP.12:8600903 chr12:008600903 0 W/8600903-8600903 FN1481-S Single Base Substitution G-A INTRON Homo SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN697-S.SNP.12:8605889 chr12:008605889 0 W/8605889-8605889 FN697-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g15080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 627, Mutant_ID: FN697-S, Generation: M2, Mutations: 29, Genes: 37, Seed availability: Yes. FN1462-S.SNP.12:8610822 chr12:008610822 0 W/8610822-8610822 FN1462-S Single Base Substitution G-T INTRON Homo SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN678-S.SNP.12:8611807 chr12:008611807 0 W/8611807-8611807 FN678-S Single Base Substitution C-A INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3495-S.SNP.12:8617892 chr12:008617892 0 W/8617892-8617892 FN3495-S SNP A -> C AC=1;AN=188;BQB=0.903855;DP=2719;DP4=1209,1434,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=40;MQ0F=0.00441339;MQB=0.102781;MQSB=5.9389e-15;RPB=0.870313;SGB=80.782;VDB=0.677302;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgC|R854|1112|LOC_Os12g15100|protein_coding|CODING|LOC_Os12g15100.1|2|1) FN1429-S.SNP.12:8618498 chr12:008618498 0 W/8618498-8618498 FN1429-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-94.SNP.12:8623801 chr12:008623801 0 W/8623801-8623801 FN-94 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g15110 retrotransposon protein, putative, unclassified, expressed SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN-142.SNP.12:8626714 chr12:008626714 0 W/8626714-8626714 FN-142 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g15120 retrotransposon protein, putative, unclassified, expressed SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN771-S.SNP.12:8627745 chr12:008627745 0 W/8627745-8627745 FN771-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g15120 retrotransposon protein, putative, unclassified, expressed SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1557-S.SNP.12:8634703 chr12:008634703 0 W/8634703-8634703 FN1557-S Single Base Substitution C-T INTRON HET SNo: 1302, Mutant_ID: FN1557-S, Generation: M2, Mutations: 104, Genes: 35, Seed availability: Yes. FN-178.SNP.12:8637328 chr12:008637328 0 W/8637328-8637328 FN-178 Single Base Substitution G-C INTRON HET SNo: 178, Mutant_ID: FN-178, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN1687-S.SNP.12:8638802 chr12:008638802 0 W/8638802-8638802 FN1687-S SNP C -> T AC=1;AN=188;BQB=0.706727;DP=3818;DP4=1910,1870,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000785752;MQB=0.000289595;MQSB=0.907103;RPB=0.801677;SGB=13.2547;VDB=0.119596;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D247N|951|LOC_Os12g15140|protein_coding|CODING|LOC_Os12g15140.1|5|1) FN919-S.SNP.12:8640412 chr12:008640412 0 W/8640412-8640412 FN919-S Single Base Substitution A-C INTRON HET SNo: 825, Mutant_ID: FN919-S, Generation: M2, Mutations: 101, Genes: 32, Seed availability: Yes. FN2171-S.SNP.12:8656831 chr12:008656831 0 W/8656831-8656831 FN2171-S SNP A -> G AC=1;AN=168;BQB=0.0151559;DP=2150;DP4=736,1388,2,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0147835;MQSB=0.948049;RPB=0.201725;SGB=12.4615;VDB=0.0843876;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.12:8661012 chr12:008661012 0 W/8661012-8661012 FN1414-S Single Base Substitution A-T INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2326.SNP.12:8661176 chr12:008661176 0 W/8661176-8661176 FN2326 SNP G -> A AC=1;AN=192;BQB=0.268072;DP=4648;DP4=2132,2253,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215146;MQB=7.68354e-12;MQSB=0.741188;RPB=0.75537;SGB=-68.8078;VDB=0.959706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.12:8662854 chr12:008662854 0 W/8662854-8662854 FN2583-S SNP C -> T AC=1;AN=200;BQB=0.944423;DP=4881;DP4=2440,2164,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.54884e-09;MQSB=0.987915;RPB=0.910194;SGB=54.2646;VDB=0.433355;EFF=INTERGENIC(MODIFIER||||||||||1) FN2583-S.SNP.12:8662856 chr12:008662856 0 W/8662856-8662856 FN2583-S SNP A -> G AC=1;AN=200;BQB=0.895471;DP=4884;DP4=2443,2141,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.64679e-09;MQSB=0.997594;RPB=0.92633;SGB=24.2746;VDB=0.17151;EFF=INTERGENIC(MODIFIER||||||||||1) FN-306.SNP.12:8664179 chr12:008664179 0 W/8664179-8664179 FN-306 Single Base Substitution C-A INTERGENIC HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN4240-S.SNP.12:8669181 chr12:008669181 0 W/8669181-8669181 FN4240-S SNP C -> A AC=1;AN=170;BQB=0.96592;DP=2485;DP4=1269,1143,11,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.38967e-10;MQSB=0.918189;RPB=0.720124;SGB=61.2001;VDB=0.679302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.12:8680623 chr12:008680623 0 W/8680623-8680623 FN2465 SNP A -> T AC=1;AN=200;BQB=0.817;DP=4337;DP4=1912,2166,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27974e-13;MQSB=0.993297;RPB=0.386692;SGB=69.1109;VDB=0.336659;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.12:8680948 chr12:008680948 0 W/8680948-8680948 FN2768-S SNP C -> T AC=2;AN=198;BQB=0.746796;DP=4134;DP4=1935,2009,15,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.05656e-17;MQSB=0.0821375;RPB=0.98245;SGB=159.832;VDB=0.878388;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.12:8681893 chr12:008681893 0 W/8681893-8681893 FN2304 SNP A -> G AC=1;AN=192;BQB=0.424237;DP=4959;DP4=2335,2291,23,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.8598e-19;MQSB=0.992134;RPB=0.628675;SGB=-0.0956204;VDB=0.364129;EFF=INTERGENIC(MODIFIER||||||||||1) FN3601-S.SNP.12:8683107 chr12:008683107 0 W/8683107-8683107 FN3601-S SNP C -> T AC=1;AN=190;BQB=0.657124;DP=3102;DP4=1419,1582,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.99713e-08;MQSB=0.93187;RPB=0.911048;SGB=26.2136;VDB=0.463906;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.12:8683675 chr12:008683675 0 W/8683675-8683675 FN3721-S SNP A -> G AC=1;AN=190;BQB=0.902492;DP=2808;DP4=1310,1377,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00189595;MQSB=0.0177601;RPB=0.0968618;SGB=26.3271;VDB=0.129862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2471.SNP.12:8683917 chr12:008683917 0 W/8683917-8683917 FN2471 SNP A -> G AC=1;AN=200;BQB=0.688597;DP=4353;DP4=2021,1946,9,6;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0271077;MQB=0.946306;MQSB=0.643316;RPB=0.773268;SGB=24.2746;VDB=0.0699638;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.12:8693257 chr12:008693257 0 W/8693257-8693257 FN654-S Single Base Substitution T-A INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2792-S.SNP.12:8698672 chr12:008698672 0 W/8698672-8698672 FN2792-S SNP G -> A AC=1;AN=198;BQB=0.672192;DP=4070;DP4=1993,1836,10,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.39848e-05;MQSB=0.86396;RPB=0.939049;SGB=47.3393;VDB=0.166173;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.12:8701306 chr12:008701306 0 W/8701306-8701306 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.838577;DP=2586;DP4=1359,1095,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.36323e-05;MQSB=0.374574;RPB=0.216321;SGB=49.0954;VDB=0.577979;EFF=INTERGENIC(MODIFIER||||||||||1) FN914-S.SNP.12:8706389 chr12:008706389 0 W/8706389-8706389 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN914-S.SNP.12:8706390 chr12:008706390 0 W/8706390-8706390 FN914-S Single Base Substitution G-A INTERGENIC HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN3484-S.SNP.12:8708179 chr12:008708179 0 W/8708179-8708179 FN3484-S SNP A -> G AC=1;AN=184;BQB=0.962436;DP=3280;DP4=1525,1616,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.82351e-11;MQSB=0.999987;RPB=0.998217;SGB=28.3187;VDB=0.0781732;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.12:8713153 chr12:008713153 0 W/8713153-8713153 FN1102-S Single Base Substitution C-T INTERGENIC HET SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN_826-4-1.SNP.12:8713394 chr12:008713394 0 W/8713394-8713394 FN_826-4-1 Single Base Substitution G-T HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN1285-S.SNP.12:8716649 chr12:008716649 0 W/8716649-8716649 FN1285-S Single Base Substitution G-A INTERGENIC HET SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN462-S.SNP.12:8718562 chr12:008718562 0 W/8718562-8718562 FN462-S Single Base Substitution G-A INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1363-S.SNP.12:8721860 chr12:008721860 0 W/8721860-8721860 FN1363-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g15290 retrotransposon protein, putative, Ty1-copia subclass SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3520-S.SNP.12:8722983 chr12:008722983 0 W/8722983-8722983 FN3520-S SNP T -> A AC=1;AN=188;BQB=0.986916;DP=3154;DP4=1586,1460,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.000317058;MQB=0.118775;MQSB=0.712413;RPB=0.993073;SGB=74.9605;VDB=0.566266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1102-S.SNP.12:8723726 chr12:008723726 0 W/8723726-8723726 FN1102-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g15300 retrotransposon protein, putative, Ty1-copia subclass SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1102-S.SNP.12:8723800 chr12:008723800 0 W/8723800-8723800 FN1102-S Single Base Substitution G-C SYNONYMOUS_CODING HOMO SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN1102-S.SNP.12:8723810 chr12:008723810 0 W/8723810-8723810 FN1102-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g15300 retrotransposon protein, putative, Ty1-copia subclass SNo: 977, Mutant_ID: FN1102-S, Generation: M2, Mutations: 62, Genes: 16, Seed availability: Yes. FN-161.SNP.12:8727640 chr12:008727640 0 W/8727640-8727640 FN-161 Single Base Substitution G-C INTRON HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN-345.SNP.12:8728049 chr12:008728049 0 W/8728049-8728049 FN-345 Single Base Substitution T-A INTRON HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN-345.SNP.12:8728050 chr12:008728050 0 W/8728050-8728050 FN-345 Single Base Substitution T-C INTRON HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN488-S.SNP.12:8730990 chr12:008730990 0 W/8730990-8730990 FN488-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g15314 staphylococcal nuclease homologue, putative, expressed SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN-158.SNP.12:8749047 chr12:008749047 0 W/8749047-8749047 FN-158 Single Base Substitution G-T INTERGENIC HOMO SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN3850-S.SNP.12:8751547 chr12:008751547 0 W/8751547-8751547 FN3850-S SNP C -> T AC=1;AN=158;BQB=0.853912;DP=2551;DP4=1330,1100,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.40956e-09;MQSB=0.99892;RPB=1;SGB=77.6532;VDB=0.550803;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D455|1682|LOC_Os12g15340|protein_coding|CODING|LOC_Os12g15340.1|2|1) FN1646-S.SNP.12:8752602 chr12:008752602 0 W/8752602-8752602 FN1646-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1351, Mutant_ID: FN1646-S, Generation: M2, Mutations: 86, Genes: 13, Seed availability: Yes. FN2619-S.SNP.12:8757700 chr12:008757700 0 W/8757700-8757700 FN2619-S SNP A -> G AC=1;AN=198;BQB=0.406245;DP=4028;DP4=1718,2029,11,21;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.62557e-17;MQSB=0.830044;RPB=0.290741;SGB=68.2711;VDB=0.269591;EFF=INTERGENIC(MODIFIER||||||||||1) FN736-S.SNP.12:8758108 chr12:008758108 0 W/8758108-8758108 FN736-S Single Base Substitution G-A INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN3308-S.SNP.12:8761766 chr12:008761766 0 W/8761766-8761766 FN3308-S SNP C -> T AC=1;AN=184;BQB=0.92836;DP=3220;DP4=1944,1174,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000310559;MQB=2.79704e-05;MQSB=0.0908718;RPB=0.999939;SGB=46.3132;VDB=0.531592;EFF=INTERGENIC(MODIFIER||||||||||1) FN1232-S.SNP.12:8769411 chr12:008769411 0 W/8769411-8769411 FN1232-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1057, Mutant_ID: FN1232-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN2153-S.SNP.12:8769411 chr12:008769411 0 W/8769411-8769411 FN2153-S SNP G -> A AC=2;AN=168;BQB=0.270618;DP=3131;DP4=1442,1624,14,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.86197e-08;MQSB=0.580346;RPB=0.772703;SGB=15.6372;VDB=0.308066;EFF=INTERGENIC(MODIFIER||||||||||1) FN2448.SNP.12:8769411 chr12:008769411 0 W/8769411-8769411 FN2448 SNP G -> A AC=2;AN=200;BQB=0.687198;DP=4288;DP4=1893,2174,14,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.78473e-15;MQSB=0.464514;RPB=0.945747;SGB=127.947;VDB=0.711313;EFF=INTERGENIC(MODIFIER||||||||||1) FN3738-S.SNP.12:8769411 chr12:008769411 0 W/8769411-8769411 FN3738-S SNP G -> A AC=2;AN=190;BQB=0.958592;DP=2901;DP4=1326,1459,14,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35791e-11;MQSB=0.588234;RPB=0.904043;SGB=108.296;VDB=0.281603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3941-S.SNP.12:8769411 chr12:008769411 0 W/8769411-8769411 FN3941-S SNP G -> A AC=2;AN=168;BQB=0.843715;DP=2943;DP4=1337,1499,9,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.48601e-14;MQSB=0.184358;RPB=0.634117;SGB=72.4869;VDB=0.181959;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.12:8771249 chr12:008771249 0 W/8771249-8771249 FN4272-S SNP T -> C AC=2;AN=170;BQB=0.955166;DP=2617;DP4=1055,1408,14,24;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.5554e-16;MQSB=0.574949;RPB=0.908117;SGB=120.944;VDB=0.0103781;EFF=INTERGENIC(MODIFIER||||||||||1) FN3607-S.SNP.12:8776163 chr12:008776163 0 W/8776163-8776163 FN3607-S SNP A -> C AC=1;AN=190;BQB=0.99371;DP=3052;DP4=1611,1337,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.57007e-07;MQSB=0.994753;RPB=0.0741947;SGB=53.6492;VDB=0.18952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.12:8783949 chr12:008783949 0 W/8783949-8783949 FN2659-S SNP A -> G AC=1;AN=200;BQB=0.911486;DP=4489;DP4=2128,2202,10,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.1728e-07;MQSB=0.9532;RPB=0.996958;SGB=33.0593;VDB=0.297748;EFF=INTERGENIC(MODIFIER||||||||||1) FN2555-S.SNP.12:8784822 chr12:008784822 0 W/8784822-8784822 FN2555-S SNP T -> C AC=1;AN=198;BQB=0.418482;DP=4348;DP4=1859,2212,14,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00229991;MQB=9.9662e-11;MQSB=0.98854;RPB=0.714227;SGB=37.1297;VDB=0.148642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.12:8792325 chr12:008792325 0 W/8792325-8792325 FN2276-S SNP T -> C AC=1;AN=190;BQB=0.943225;DP=3736;DP4=1335,1821,11,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.11282e-12;MQSB=0.00157053;RPB=0.779767;SGB=61.9679;VDB=0.987149;EFF=UTR_5_PRIME(MODIFIER||132||441|LOC_Os12g15400|protein_coding|CODING|LOC_Os12g15400.1|1|1) FN_N1-116-1.SNP.12:8792838 chr12:008792838 0 W/8792838-8792838 FN_N1-116-1 Single Base Substitution C-G HET LOC_Os12g15400 CXE carboxylesterase, putative, expressed SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2581-S.SNP.12:8798636 chr12:008798636 0 W/8798636-8798636 FN2581-S SNP C -> T AC=1;AN=198;BQB=0.418181;DP=4403;DP4=1861,2285,9,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.25048e-08;MQSB=0.993379;RPB=0.486672;SGB=54.5295;VDB=0.708022;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A95|103|LOC_Os12g15410|protein_coding|CODING|LOC_Os12g15410.1|1|1) FN-35.SNP.12:8806148 chr12:008806148 0 W/8806148-8806148 FN-35 Single Base Substitution C-T INTRON Homo SNo: 35, Mutant_ID: FN-35, Generation: M2, Mutations: 40, Genes: 89, Seed availability: Yes. FN1529-S.SNP.12:8806148 chr12:008806148 0 W/8806148-8806148 FN1529-S Single Base Substitution C-T INTRON Homo SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2445.SNP.12:8806148 chr12:008806148 0 W/8806148-8806148 FN2445 SNP C -> T AC=2;AN=200;BQB=0.988672;DP=4625;DP4=2295,2060,25,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.68429e-28;MQSB=0.759387;RPB=0.631704;SGB=206.235;VDB=0.0529386;EFF=INTRON(MODIFIER||||787|LOC_Os12g15420|protein_coding|CODING|LOC_Os12g15420.1|6|1) FN2375.SNP.12:8810383 chr12:008810383 0 W/8810383-8810383 FN2375 SNP A -> G AC=1;AN=192;BQB=0.884942;DP=5219;DP4=2637,2321,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000191608;MQB=3.33191e-10;MQSB=0.791596;RPB=0.184687;SGB=26.3496;VDB=0.0534108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.12:8813641 chr12:008813641 0 W/8813641-8813641 FN1745-S SNP A -> G AC=1;AN=188;BQB=0.982193;DP=2629;DP4=1071,1512,10,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.75135e-11;MQSB=0.877934;RPB=0.84665;SGB=64.3306;VDB=0.540063;EFF=INTERGENIC(MODIFIER||||||||||1) FN2483.SNP.12:8818600 chr12:008818600 0 W/8818600-8818600 FN2483 SNP A -> G AC=2;AN=200;BQB=0.980374;DP=4009;DP4=1999,1718,22,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07405e-19;MQSB=0.545322;RPB=0.974093;SGB=115.978;VDB=0.516174;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.12:8824483 chr12:008824483 0 W/8824483-8824483 FN1506-S Single Base Substitution T-C UTR_3_PRIME HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN908-S.SNP.12:8827318 chr12:008827318 0 W/8827318-8827318 FN908-S Single Base Substitution C-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1648-S.SNP.12:8831071 chr12:008831071 0 W/8831071-8831071 FN1648-S Single Base Substitution A-G INTRON Homo SNo: 1353, Mutant_ID: FN1648-S, Generation: M2, Mutations: 41, Genes: 18, Seed availability: Yes. FN2386.SNP.12:8832115 chr12:008832115 0 W/8832115-8832115 FN2386 SNP C -> T AC=1;AN=192;BQB=0.63873;DP=4838;DP4=2451,2122,20,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.39158e-17;MQSB=0.74467;RPB=0.915689;SGB=27.6913;VDB=0.83739;EFF=INTRON(MODIFIER||||521|LOC_Os12g15470|protein_coding|CODING|LOC_Os12g15470.1|7|1),INTRON(MODIFIER||||510|LOC_Os12g15470|protein_coding|CODING|LOC_Os12g15470.2|7|1),INTRON(MODIFIER||||418|LOC_Os12g15470|protein_coding|CODING|LOC_Os12g15470.3|7|1) FN2215-S.SNP.12:8835327 chr12:008835327 0 W/8835327-8835327 FN2215-S SNP C -> A AC=1;AN=190;BQB=0.647361;DP=5110;DP4=2456,2297,16,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.58715e-17;MQSB=0.934455;RPB=0.995757;SGB=72.1834;VDB=0.269704;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.12:8837691 chr12:008837691 0 W/8837691-8837691 FN3525-S SNP A -> T AC=1;AN=188;BQB=0.999461;DP=2743;DP4=1441,1157,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.06786e-06;MQSB=0.889966;RPB=0.991315;SGB=48.979;VDB=0.792905;EFF=INTERGENIC(MODIFIER||||||||||1) FN-94.SNP.12:8841816 chr12:008841816 0 W/8841816-8841816 FN-94 Single Base Substitution A-T INTERGENIC HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1700-S.SNP.12:8844058 chr12:008844058 0 W/8844058-8844058 FN1700-S SNP G -> A AC=2;AN=188;BQB=0.746893;DP=3107;DP4=2095,958,17,5;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.12588e-08;MQSB=0.899299;RPB=0.190258;SGB=14.798;VDB=0.712319;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.12:8847104 chr12:008847104 0 W/8847104-8847104 FN3834-S SNP C -> A AC=1;AN=190;BQB=0.990462;DP=2623;DP4=1085,1382,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.02394e-08;MQSB=0.838737;RPB=0.413505;SGB=50.3161;VDB=0.309041;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.12:8849540 chr12:008849540 0 W/8849540-8849540 FN-226 Single Base Substitution T-G INTRON HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2361.SNP.12:8853184 chr12:008853184 0 W/8853184-8853184 FN2361 SNP T -> C AC=1;AN=192;BQB=0.998147;DP=3895;DP4=1672,1775,18,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000256739;MQB=5.55332e-11;MQSB=0.722851;RPB=0.973605;SGB=122.24;VDB=0.744856;EFF=INTERGENIC(MODIFIER||||||||||1) FN432-S.SNP.12:8859679 chr12:008859679 0 W/8859679-8859679 FN432-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN3413-S.SNP.12:8859919 chr12:008859919 0 W/8859919-8859919 FN3413-S SNP G -> A AC=1;AN=184;BQB=0.990069;DP=3648;DP4=1705,1763,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.17835e-08;MQSB=0.812114;RPB=0.724945;SGB=53.2642;VDB=0.226476;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P165|323|LOC_Os12g15520|protein_coding|CODING|LOC_Os12g15520.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P165|323|LOC_Os12g15520|protein_coding|CODING|LOC_Os12g15520.1|1|1) FN2739-S.SNP.12:8865103 chr12:008865103 0 W/8865103-8865103 FN2739-S SNP T -> C AC=1;AN=200;BQB=0.982974;DP=4567;DP4=2293,2058,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000218962;MQB=1.91494e-10;MQSB=0.625751;RPB=0.74153;SGB=86.5007;VDB=0.118547;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.12:8865385 chr12:008865385 0 W/8865385-8865385 FN3477-S SNP G -> T AC=1;AN=184;BQB=0.914997;DP=2379;DP4=1174,1140,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.63739e-07;MQSB=0.99442;RPB=0.875583;SGB=25.1826;VDB=0.169441;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.12:8867499 chr12:008867499 0 W/8867499-8867499 FN_812-4-1 Single Base Substitution G-A Homo SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN260-S.SNP.12:8876060 chr12:008876060 0 W/8876060-8876060 FN260-S Single Base Substitution A-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN260-S.SNP.12:8876061 chr12:008876061 0 W/8876061-8876061 FN260-S Single Base Substitution C-T INTERGENIC HET SNo: 259, Mutant_ID: FN260-S, Generation: M2, Mutations: 56, Genes: 19, Seed availability: No. FN3912-S.SNP.12:8876309 chr12:008876309 0 W/8876309-8876309 FN3912-S SNP C -> T AC=1;AN=158;BQB=0.775254;DP=2009;DP4=987,948,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.97162e-05;MQSB=0.984405;RPB=0.828894;SGB=27.3346;VDB=0.938014;EFF=INTERGENIC(MODIFIER||||||||||1) FN1492-S.SNP.12:8878729 chr12:008878729 0 W/8878729-8878729 FN1492-S Single Base Substitution A-G INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2106-S.SNP.12:8885023 chr12:008885023 0 W/8885023-8885023 FN2106-S SNP C -> G AC=1;AN=168;BQB=0.150925;DP=2770;DP4=1401,1297,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000361011;MQB=1.20883e-05;MQSB=1.6807e-07;RPB=0.982519;SGB=-66.4989;VDB=0.773647;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.12:8886912 chr12:008886912 0 W/8886912-8886912 FN3692-S SNP G -> T AC=1;AN=190;BQB=0.0614824;DP=2860;DP4=1380,1323,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.98086e-07;MQSB=0.949343;RPB=0.997907;SGB=2.55724;VDB=0.968478;EFF=INTERGENIC(MODIFIER||||||||||1) FN-261.SNP.12:8887121 chr12:008887121 0 W/8887121-8887121 FN-261 Single Base Substitution C-A INTERGENIC HOMO SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN2149-S.SNP.12:8888459 chr12:008888459 0 W/8888459-8888459 FN2149-S SNP C -> G AC=1;AN=168;BQB=0.00762873;DP=3186;DP4=1150,1961,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.0020177;MQSB=0.949205;RPB=0.608145;SGB=-141.204;VDB=0.255676;EFF=INTERGENIC(MODIFIER||||||||||1) FN4179-S.SNP.12:8896044 chr12:008896044 0 W/8896044-8896044 FN4179-S SNP A -> T AC=1;AN=170;BQB=0.987595;DP=4226;DP4=2375,1732,11,13;HOB=6.92042e-05;ICB=0.000139222;MQ=27;MQ0F=0.15452;MQB=0.0205314;MQSB=0.474091;RPB=0.868389;SGB=72.7472;VDB=0.850592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V61D|64|LOC_Os12g15560|protein_coding|CODING|LOC_Os12g15560.1|2|1) FN3826-S.SNP.12:8896199 chr12:008896199 0 W/8896199-8896199 FN3826-S SNP A -> T AC=1;AN=190;BQB=0.473825;DP=3556;DP4=1726,1737,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0289651;MQB=0.0488625;MQSB=1.06408e-22;RPB=0.0807461;SGB=15.9981;VDB=0.158054;EFF=INTRON(MODIFIER||||64|LOC_Os12g15560|protein_coding|CODING|LOC_Os12g15560.1|1|1) FN2547-S.SNP.12:8917935 chr12:008917935 0 W/8917935-8917935 FN2547-S SNP C -> T AC=1;AN=198;BQB=0.489175;DP=4200;DP4=1978,2021,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.45633e-05;MQSB=0.998022;RPB=0.992033;SGB=13.7737;VDB=0.475586;EFF=INTERGENIC(MODIFIER||||||||||1) FN_770-6-1.SNP.12:8921271 chr12:008921271 0 W/8921271-8921271 FN_770-6-1 Single Base Substitution G-T HET LOC_Os12g15620 retrotransposon protein, putative, unclassified, expressed SNo: 1479, Mutant_ID: FN_770-6-1, Generation: M3, Mutations: 60, Genes: 50, Seed availability: Yes. FN-339.SNP.12:8922609 chr12:008922609 0 W/8922609-8922609 FN-339 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 331, Mutant_ID: FN-339, Generation: M2, Mutations: 40, Genes: 47, Seed availability: Yes. FN2784-S.SNP.12:8922609 chr12:008922609 0 W/8922609-8922609 FN2784-S SNP G -> A AC=2;AN=198;BQB=0.789706;DP=4105;DP4=1883,1962,25,30;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000243605;MQB=1.41692e-29;MQSB=0.41652;RPB=0.934269;SGB=187.549;VDB=0.220561;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P605|633|LOC_Os12g15620|protein_coding|CODING|LOC_Os12g15620.1|7|1) FN3465-S.SNP.12:8922609 chr12:008922609 0 W/8922609-8922609 FN3465-S SNP G -> A AC=2;AN=184;BQB=0.696306;DP=3539;DP4=1594,1819,31,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.57885e-26;MQSB=0.913482;RPB=1;SGB=180.7;VDB=0.844296;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P605|633|LOC_Os12g15620|protein_coding|CODING|LOC_Os12g15620.1|7|1) FN973-S.SNP.12:8922609 chr12:008922609 0 W/8922609-8922609 FN973-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN1371-S.SNP.12:8925070 chr12:008925070 0 W/8925070-8925070 FN1371-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g15630 retrotransposon protein, putative, unclassified, expressed SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN2594-S.SNP.12:8925539 chr12:008925539 0 W/8925539-8925539 FN2594-S SNP T -> C AC=2;AN=198;BQB=0.951042;DP=3899;DP4=1877,1841,15,13;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.77463e-16;MQSB=0.993347;RPB=0.955944;SGB=90.4807;VDB=0.738136;EFF=INTRON(MODIFIER||||1139|LOC_Os12g15630|protein_coding|CODING|LOC_Os12g15630.1|4|1) FN2279-S.SNP.12:8928036 chr12:008928036 0 W/8928036-8928036 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.104483;DP=4826;DP4=2433,2121,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000207211;MQB=6.30067e-14;MQSB=0.893969;RPB=0.99565;SGB=103.742;VDB=0.529874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V139M|1139|LOC_Os12g15630|protein_coding|CODING|LOC_Os12g15630.1|1|1) FN2691-S.SNP.12:8930003 chr12:008930003 0 W/8930003-8930003 FN2691-S SNP G -> A AC=1;AN=200;BQB=0.894403;DP=4725;DP4=1830,2654,6,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.10642e-10;MQSB=0.551759;RPB=0.816765;SGB=54.6902;VDB=0.333779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2288.SNP.12:8935461 chr12:008935461 0 W/8935461-8935461 FN2288 SNP G -> A AC=2;AN=192;BQB=0.998835;DP=4639;DP4=2419,1926,12,8;HOB=0.0206163;ICB=0.494846;MQ=31;MQ0F=0.0883811;MQB=0.539053;MQSB=0;RPB=0.999984;SGB=85.7252;VDB=0.170536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R1190K|1447|LOC_Os12g15650|protein_coding|CODING|LOC_Os12g15650.1|2|1) FN2332.SNP.12:8939618 chr12:008939618 0 W/8939618-8939618 FN2332 SNP G -> A AC=1;AN=192;BQB=0.911533;DP=5948;DP4=3255,2308,11,23;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.00151311;MQB=9.09721e-06;MQSB=9.17316e-34;RPB=0.954521;SGB=33.9487;VDB=0.349643;EFF=INTERGENIC(MODIFIER||||||||||1) FN3056-S.SNP.12:8945667 chr12:008945667 0 W/8945667-8945667 FN3056-S SNP C -> T AC=2;AN=184;BQB=0.992003;DP=2670;DP4=1186,1380,11,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.23729e-17;MQSB=0.987617;RPB=0.529419;SGB=56.0583;VDB=0.631023;EFF=INTERGENIC(MODIFIER||||||||||1) FN3714-S.SNP.12:8947468 chr12:008947468 0 W/8947468-8947468 FN3714-S SNP G -> A AC=1;AN=190;BQB=0.699786;DP=2360;DP4=1030,1250,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.69398e-07;MQSB=0.902967;RPB=0.631184;SGB=32.5467;VDB=0.278215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1619-S.SNP.12:8951291 chr12:008951291 0 W/8951291-8951291 FN1619-S Single Base Substitution C-T INTRON HET SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN4240-S.SNP.12:8951815 chr12:008951815 0 W/8951815-8951815 FN4240-S SNP C -> A AC=1;AN=170;BQB=0.388297;DP=2581;DP4=1314,1179,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000157626;MQSB=0.0195935;RPB=0.993535;SGB=27.9928;VDB=0.567998;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G757C|1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|4|1) FN-139.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN-139 Single Base Substitution G-T INTRON HET SNo: 139, Mutant_ID: FN-139, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN-167.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN-167 Single Base Substitution G-T INTRON HOMO SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1623-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN1623-S Single Base Substitution G-T INTRON HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN1697-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN1697-S SNP G -> T AC=2;AN=188;BQB=0.904498;DP=3771;DP4=1616,2109,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79696e-15;MQSB=0.999995;RPB=0.932169;SGB=-42.845;VDB=0.634783;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN2113-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN2113-S SNP G -> T AC=2;AN=168;BQB=0.372527;DP=4292;DP4=1957,2268,25,28;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.9377e-23;MQSB=0.999595;RPB=0.721141;SGB=-229.993;VDB=0.507933;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN2707-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN2707-S SNP G -> T AC=2;AN=200;BQB=0.502297;DP=4928;DP4=2353,2344,15,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.31025e-15;MQSB=0.0443946;RPB=0.304982;SGB=155.578;VDB=0.392629;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN3906-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN3906-S SNP G -> T AC=2;AN=158;BQB=0.926649;DP=2560;DP4=1291,1185,6,6;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=3.70762e-06;MQSB=0.678214;RPB=0.942872;SGB=47.0672;VDB=0.606741;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN4125-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN4125-S SNP G -> T AC=2;AN=182;BQB=0.976071;DP=2984;DP4=1584,1321,13,15;HOB=0.0217365;ICB=0.494567;MQ=48;MQ0F=0;MQB=5.46637e-13;MQSB=0.0317516;RPB=0.869335;SGB=120.796;VDB=0.264634;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN456-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN456-S Single Base Substitution G-T INTRON HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN591-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN591-S Single Base Substitution G-T INTRON HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN837-S Single Base Substitution G-T INTRON HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN947-S.SNP.12:8954890 chr12:008954890 0 W/8954890-8954890 FN947-S Single Base Substitution G-T INTRON HOMO SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3760-S.SNP.12:8956984 chr12:008956984 0 W/8956984-8956984 FN3760-S SNP C -> A AC=1;AN=190;BQB=0.884257;DP=2288;DP4=1088,1036,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=0.0188912;MQSB=0.453915;RPB=0.98526;SGB=18.3316;VDB=0.648709;EFF=INTRON(MODIFIER||||1074|LOC_Os12g15670|protein_coding|CODING|LOC_Os12g15670.1|1|1) FN2441.SNP.12:8961526 chr12:008961526 0 W/8961526-8961526 FN2441 SNP A -> G AC=1;AN=200;BQB=0.642639;DP=4613;DP4=1751,2551,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09112e-19;MQSB=0.974142;RPB=0.884024;SGB=65.9573;VDB=0.256894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H89R|598|LOC_Os12g15680|protein_coding|CODING|LOC_Os12g15680.1|2|1) FN4139-S.SNP.12:8965960 chr12:008965960 0 W/8965960-8965960 FN4139-S SNP G -> A AC=1;AN=170;BQB=0.997937;DP=2165;DP4=1211,892,10,4;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=3.88432e-07;MQSB=0.0108749;RPB=0.845864;SGB=56.7575;VDB=0.530676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3774-S.SNP.12:8969014 chr12:008969014 0 W/8969014-8969014 FN3774-S SNP G -> A AC=1;AN=190;BQB=0.997676;DP=2947;DP4=1589,1248,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.000678656;MQB=0.0119075;MQSB=0.877632;RPB=0.959642;SGB=43.2083;VDB=0.479998;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.12:8970617 chr12:008970617 0 W/8970617-8970617 FN2674-S SNP G -> T AC=1;AN=200;BQB=0.996921;DP=4615;DP4=2180,2151,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.46923e-10;MQSB=0.959267;RPB=0.550099;SGB=77.2904;VDB=0.249373;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tAc|S1169Y|1500|LOC_Os12g15700|protein_coding|CODING|LOC_Os12g15700.1|5|1) FN2594-S.SNP.12:8972577 chr12:008972577 0 W/8972577-8972577 FN2594-S SNP C -> A AC=2;AN=198;BQB=0.992158;DP=3630;DP4=1662,1776,5,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.00165289;MQB=4.85851e-07;MQSB=0.710206;RPB=0.0752782;SGB=58.7391;VDB=0.396626;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M642I|1500|LOC_Os12g15700|protein_coding|CODING|LOC_Os12g15700.1|3|1) FN1736-S.SNP.12:8975838 chr12:008975838 0 W/8975838-8975838 FN1736-S SNP A -> G AC=1;AN=188;BQB=0.654885;DP=1961;DP4=932,981,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.00713921;MQB=0.502163;MQSB=1.29397e-05;RPB=0.982374;SGB=28.8977;VDB=0.0294266;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.12:8977088 chr12:008977088 0 W/8977088-8977088 FN2649-S SNP G -> A AC=1;AN=200;BQB=0.874952;DP=5237;DP4=2210,2708,11,25;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.11475e-21;MQSB=0.760235;RPB=0.978396;SGB=38.383;VDB=0.197942;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.12:8977313 chr12:008977313 0 W/8977313-8977313 FN-288 Single Base Substitution A-C INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN2327.SNP.12:8977418 chr12:008977418 0 W/8977418-8977418 FN2327 SNP C -> T AC=1;AN=192;BQB=0.167933;DP=4570;DP4=2085,2086,13,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.08398e-12;MQSB=0.988674;RPB=0.31699;SGB=13.6122;VDB=0.39107;EFF=INTERGENIC(MODIFIER||||||||||1) FN-138.SNP.12:8981092 chr12:008981092 0 W/8981092-8981092 FN-138 Single Base Substitution C-G INTERGENIC HOMO SNo: 138, Mutant_ID: FN-138, Generation: M2, Mutations: 31, Genes: 31, Seed availability: No. FN-246.SNP.12:8985179 chr12:008985179 0 W/8985179-8985179 FN-246 Single Base Substitution C-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. FN704-S.SNP.12:8985179 chr12:008985179 0 W/8985179-8985179 FN704-S Single Base Substitution C-T INTERGENIC HOMO SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2640-S.SNP.12:8985361 chr12:008985361 0 W/8985361-8985361 FN2640-S SNP T -> C AC=1;AN=200;BQB=0.627984;DP=4801;DP4=2220,2347,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.27544e-07;MQSB=0.999116;RPB=0.869637;SGB=24.2746;VDB=0.54753;EFF=INTERGENIC(MODIFIER||||||||||1) FN541-S.SNP.12:8986936 chr12:008986936 0 W/8986936-8986936 FN541-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g15730 transposon protein, putative, CACTA, En/Spm sub-class SNo: 537, Mutant_ID: FN541-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. FN1610-S.SNP.12:8988795 chr12:008988795 0 W/8988795-8988795 FN1610-S Single Base Substitution T-C INTRON HET SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN2530-S.SNP.12:8991030 chr12:008991030 0 W/8991030-8991030 FN2530-S SNP A -> G AC=1;AN=198;BQB=0.339982;DP=3615;DP4=1820,1496,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=40;MQ0F=0.0174274;MQB=0.807727;MQSB=1.46147e-22;RPB=0.624083;SGB=13.7737;VDB=0.811884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.12:8993552 chr12:008993552 0 W/8993552-8993552 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.992077;DP=5679;DP4=2615,2798,12,5;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.200563;MQB=0.545405;MQSB=1.57203e-40;RPB=0.881039;SGB=72.6852;VDB=0.819082;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R736H|1475|LOC_Os12g15750|protein_coding|CODING|LOC_Os12g15750.1|1|1) FN2655-S.SNP.12:8999273 chr12:008999273 0 W/8999273-8999273 FN2655-S SNP G -> C AC=1;AN=200;BQB=0.815017;DP=5112;DP4=2685,2189,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14077e-14;MQSB=0.960252;RPB=0.1536;SGB=100.316;VDB=0.0770117;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.12:9001622 chr12:009001622 0 W/9001622-9001622 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.874117;DP=3097;DP4=1550,1439,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.56761e-08;MQSB=0.983943;RPB=0.404341;SGB=71.3514;VDB=0.147249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3323-S.SNP.12:9001944 chr12:009001944 0 W/9001944-9001944 FN3323-S SNP C -> T AC=1;AN=184;BQB=0.999885;DP=3172;DP4=1596,1477,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.33618e-08;MQSB=0.947935;RPB=0.999077;SGB=39.2697;VDB=0.550319;EFF=INTERGENIC(MODIFIER||||||||||1) FN2304.SNP.12:9002417 chr12:009002417 0 W/9002417-9002417 FN2304 SNP G -> A AC=1;AN=192;BQB=0.683806;DP=4516;DP4=2171,2061,24,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.1e-21;MQSB=0.891737;RPB=0.996681;SGB=181.577;VDB=0.0752896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.12:9005678 chr12:009005678 0 W/9005678-9005678 FN3343-S SNP T -> A AC=1;AN=184;BQB=0.890219;DP=2740;DP4=1368,1187,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.77689e-06;MQSB=0.949172;RPB=0.999594;SGB=35.7479;VDB=0.389824;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTt/aAt|I6N|1219|LOC_Os12g15780|protein_coding|CODING|LOC_Os12g15780.1|1|1) FN499-S.SNP.12:9012103 chr12:009012103 0 W/9012103-9012103 FN499-S Single Base Substitution C-T INTRON HET SNo: 497, Mutant_ID: FN499-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2488.SNP.12:9012378 chr12:009012378 0 W/9012378-9012378 FN2488 SNP C -> A AC=1;AN=200;BQB=0.344742;DP=3867;DP4=1971,1361,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.7798e-07;MQSB=0.466577;RPB=0.822624;SGB=29.4849;VDB=0.177244;EFF=INTRON(MODIFIER||||212|LOC_Os12g15790|protein_coding|CODING|LOC_Os12g15790.1|1|1) FN-141.SNP.12:9013707 chr12:009013707 0 W/9013707-9013707 FN-141 Single Base Substitution G-A INTERGENIC HOMO SNo: 141, Mutant_ID: FN-141, Generation: M2, Mutations: 48, Genes: 63, Seed availability: Yes. FN1112-S.SNP.12:9016164 chr12:009016164 0 W/9016164-9016164 FN1112-S Single Base Substitution T-C INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3799-S.SNP.12:9017047 chr12:009017047 0 W/9017047-9017047 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.986999;DP=3394;DP4=1584,1510,8,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24792e-09;MQSB=0.999098;RPB=0.993209;SGB=-63.2114;VDB=0.0406262;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.12:9019364 chr12:009019364 0 W/9019364-9019364 FN2194-S SNP G -> A AC=1;AN=190;BQB=0.993082;DP=4610;DP4=2093,2208,14,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000433839;MQB=3.05719e-16;MQSB=0.92361;RPB=0.742521;SGB=110.732;VDB=0.410805;EFF=INTRON(MODIFIER||||181|LOC_Os12g15800|protein_coding|CODING|LOC_Os12g15800.1|2|1) FN4074-S.SNP.12:9022023 chr12:009022023 0 W/9022023-9022023 FN4074-S SNP G -> C AC=1;AN=182;BQB=0.981448;DP=3116;DP4=1493,1536,3,6;HOB=6.03792e-05;ICB=0.000121422;MQ=42;MQ0F=0.00898588;MQB=0.870381;MQSB=4.39556e-08;RPB=0.302801;SGB=35.0899;VDB=0.848733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2768-S.SNP.12:9022903 chr12:009022903 0 W/9022903-9022903 FN2768-S SNP G -> C AC=2;AN=198;BQB=0.97287;DP=4045;DP4=1853,1855,16,27;HOB=0.019998;ICB=0.495001;MQ=24;MQ0F=0.220272;MQB=0.449417;MQSB=5.27757e-41;RPB=0.476551;SGB=96.8175;VDB=0.821145;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.12:9025228 chr12:009025228 0 W/9025228-9025228 FN4158-S SNP C -> A AC=1;AN=170;BQB=0.99276;DP=2309;DP4=1246,994,8,8;HOB=6.92042e-05;ICB=0.000139222;MQ=35;MQ0F=0.0922477;MQB=0.919602;MQSB=5.45203e-06;RPB=0.605555;SGB=45.206;VDB=0.878741;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ttc|V1360F|1398|LOC_Os12g15820|protein_coding|CODING|LOC_Os12g15820.1|2|1) FN3841-S.SNP.12:9025247 chr12:009025247 0 W/9025247-9025247 FN3841-S SNP C -> T AC=2;AN=190;BQB=0.803812;DP=2619;DP4=1536,968,13,11;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.104238;MQB=0.275621;MQSB=0.153192;RPB=0.932599;SGB=103.742;VDB=0.134637;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R1353|1398|LOC_Os12g15820|protein_coding|CODING|LOC_Os12g15820.1|2|1) FN977-S.SNP.12:9025398 chr12:009025398 0 W/9025398-9025398 FN977-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g15820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 881, Mutant_ID: FN977-S, Generation: M2, Mutations: 47, Genes: 28, Seed availability: Yes. FN-285.SNP.12:9030948 chr12:009030948 0 W/9030948-9030948 FN-285 Single Base Substitution A-C INTRON HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN1278-S.SNP.12:9030948 chr12:009030948 0 W/9030948-9030948 FN1278-S Single Base Substitution A-C INTRON HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3535-S.SNP.12:9030948 chr12:009030948 0 W/9030948-9030948 FN3535-S SNP A -> C AC=2;AN=188;BQB=0.838219;DP=2678;DP4=1328,1112,10,9;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.010829;MQB=0.994875;MQSB=9.04151e-08;RPB=0.360453;SGB=33.7061;VDB=0.275893;EFF=INTRON(MODIFIER||||284|LOC_Os12g15830|protein_coding|CODING|LOC_Os12g15830.1|1|1) FN620-S.SNP.12:9036015 chr12:009036015 0 W/9036015-9036015 FN620-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g15850 retrotransposon protein, putative, unclassified SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2652-S.SNP.12:9041685 chr12:009041685 0 W/9041685-9041685 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.549736;DP=3757;DP4=2172,1241,11,3;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0236891;MQB=0.0155616;MQSB=1.06034e-08;RPB=0.916431;SGB=40.2696;VDB=0.214265;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T18I|53|LOC_Os12g15860|protein_coding|CODING|LOC_Os12g15860.1|1|1),SPLICE_SITE_REGION(LOW||||53|LOC_Os12g15860|protein_coding|CODING|LOC_Os12g15860.1|1|1) FN2128-S.SNP.12:9041974 chr12:009041974 0 W/9041974-9041974 FN2128-S SNP G -> C AC=1;AN=168;BQB=0.830876;DP=2770;DP4=1780,951,15,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.00144404;MQB=0.000422556;MQSB=1.17961e-05;RPB=0.684684;SGB=-61.7914;VDB=0.695523;EFF=INTRON(MODIFIER||||53|LOC_Os12g15860|protein_coding|CODING|LOC_Os12g15860.1|1|1) FN2305.SNP.12:9043541 chr12:009043541 0 W/9043541-9043541 FN2305 SNP C -> A AC=1;AN=192;BQB=0.509741;DP=4449;DP4=1908,2222,12,12;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00382108;MQB=9.10856e-09;MQSB=0.344442;RPB=0.937457;SGB=75.4235;VDB=0.355496;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.12:9044849 chr12:009044849 0 W/9044849-9044849 FN2136-S SNP T -> C AC=1;AN=168;BQB=0.98329;DP=2399;DP4=1564,805,7,6;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0375156;MQB=0.205548;MQSB=7.25078e-32;RPB=0.958841;SGB=-0.101747;VDB=0.500601;EFF=INTRON(MODIFIER||||789|LOC_Os12g15870|protein_coding|CODING|LOC_Os12g15870.1|1|1) FN4069-S.SNP.12:9045031 chr12:009045031 0 W/9045031-9045031 FN4069-S SNP G -> T AC=2;AN=182;BQB=0.710212;DP=2744;DP4=1552,1084,34,22;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.4495e-26;MQSB=0.0797948;RPB=0.970707;SGB=241.601;VDB=0.68239;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaT|K94N|789|LOC_Os12g15870|protein_coding|CODING|LOC_Os12g15870.1|2|1) FN1660-S.SNP.12:9056295 chr12:009056295 0 W/9056295-9056295 FN1660-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g15910 retrotransposon protein, putative, unclassified, expressed SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2534-S.SNP.12:9056552 chr12:009056552 0 W/9056552-9056552 FN2534-S SNP A -> G AC=1;AN=198;BQB=0.380359;DP=3962;DP4=1945,1645,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.04405e-09;MQSB=0.94117;RPB=0.738094;SGB=14.1348;VDB=0.118067;EFF=SPLICE_SITE_DONOR(HIGH||||768|LOC_Os12g15910|protein_coding|CODING|LOC_Os12g15910.1|5|1),INTRON(MODIFIER||||768|LOC_Os12g15910|protein_coding|CODING|LOC_Os12g15910.1|5|1);LOF=(LOC_Os12g15910|LOC_Os12g15910|1|1.00) FN3558-S.SNP.12:9057908 chr12:009057908 0 W/9057908-9057908 FN3558-S SNP G -> T AC=1;AN=188;BQB=0.836091;DP=3866;DP4=1518,2270,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.7156e-07;MQSB=0.994304;RPB=0.781034;SGB=53.5223;VDB=0.896445;EFF=INTRON(MODIFIER||||768|LOC_Os12g15910|protein_coding|CODING|LOC_Os12g15910.1|1|1) FN3535-S.SNP.12:9063559 chr12:009063559 0 W/9063559-9063559 FN3535-S SNP C -> A AC=2;AN=188;BQB=0.791862;DP=2804;DP4=1495,1201,14,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=9.99659e-12;MQSB=0.953395;RPB=0.838548;SGB=94.4119;VDB=0.499665;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.12:9079756 chr12:009079756 0 W/9079756-9079756 FN2185-S SNP G -> C AC=1;AN=190;BQB=0.956339;DP=5488;DP4=2422,2636,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.20909e-13;MQSB=0.997652;RPB=0.995952;SGB=27.4193;VDB=0.45511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3460-S.SNP.12:9082995 chr12:009082995 0 W/9082995-9082995 FN3460-S SNP G -> T AC=1;AN=184;BQB=0.959749;DP=3040;DP4=1584,1334,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.00778e-06;MQSB=0.638686;RPB=0.988969;SGB=25.1826;VDB=0.662672;EFF=INTERGENIC(MODIFIER||||||||||1) FN2673-S.SNP.12:9083682 chr12:009083682 0 W/9083682-9083682 FN2673-S SNP C -> G AC=2;AN=200;BQB=0.742922;DP=4750;DP4=2213,2227,19,29;HOB=0.0198;ICB=0.495051;MQ=43;MQ0F=0.00210526;MQB=0.000108007;MQSB=0.969943;RPB=0.932565;SGB=110.245;VDB=0.132756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Gct|P80A|164|LOC_Os12g15930|protein_coding|CODING|LOC_Os12g15930.1|1|1) FN660-S.SNP.12:9091018 chr12:009091018 0 W/9091018-9091018 FN660-S Single Base Substitution C-T INTRON HOMO SNo: 600, Mutant_ID: FN660-S, Generation: M2, Mutations: 43, Genes: 19, Seed availability: Yes. FN2600-S.SNP.12:9091319 chr12:009091319 0 W/9091319-9091319 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.822853;DP=4181;DP4=2193,1791,8,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.61875e-08;MQSB=0.995794;RPB=0.644801;SGB=36.5539;VDB=0.1751;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S48|725|LOC_Os12g15950|protein_coding|CODING|LOC_Os12g15950.1|1|1) FN2378.SNP.12:9095080 chr12:009095080 0 W/9095080-9095080 FN2378 SNP C -> T AC=1;AN=192;BQB=0.718047;DP=4837;DP4=2079,2209,25,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00020674;MQB=4.44259e-16;MQSB=0.737918;RPB=0.227441;SGB=-45.3478;VDB=0.628134;EFF=INTERGENIC(MODIFIER||||||||||1) FN874-S.SNP.12:9096796 chr12:009096796 0 W/9096796-9096796 FN874-S Single Base Substitution C-T INTERGENIC HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN2419.SNP.12:9098947 chr12:009098947 0 W/9098947-9098947 FN2419 SNP C -> T AC=1;AN=200;BQB=0.87216;DP=4308;DP4=2305,1650,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57041e-05;MQSB=0.745476;RPB=0.982026;SGB=16.4591;VDB=0.919643;EFF=INTRON(MODIFIER||||147|LOC_Os12g15960|protein_coding|CODING|LOC_Os12g15960.1|2|1) FN4167-S.SNP.12:9103166 chr12:009103166 0 W/9103166-9103166 FN4167-S SNP G -> A AC=1;AN=170;BQB=0.958139;DP=2312;DP4=1191,1051,3,7;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.200692;MQB=0.977571;MQSB=0;RPB=0.80741;SGB=38.987;VDB=0.508631;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.12:9111904 chr12:009111904 0 W/9111904-9111904 FN_949-1 Single Base Substitution G-A HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN3287-S.SNP.12:9113351 chr12:009113351 0 W/9113351-9113351 FN3287-S SNP G -> T AC=1;AN=184;BQB=0.995729;DP=3096;DP4=1363,1635,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0452196;MQB=0.422838;MQSB=8.3496e-10;RPB=0.869833;SGB=40.9276;VDB=0.0549862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2297.SNP.12:9118163 chr12:009118163 0 W/9118163-9118163 FN2297 SNP C -> G AC=1;AN=192;BQB=0.9436;DP=3672;DP4=1200,2216,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=32;MQ0F=0.116285;MQB=0.413322;MQSB=0;RPB=0.994239;SGB=58.3392;VDB=0.654031;EFF=INTRON(MODIFIER||||1118|LOC_Os12g16000|protein_coding|CODING|LOC_Os12g16000.1|2|1) FN420-S.SNP.12:9128388 chr12:009128388 0 W/9128388-9128388 FN420-S Single Base Substitution G-A INTERGENIC HOMO SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2637-S.SNP.12:9129213 chr12:009129213 0 W/9129213-9129213 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.328006;DP=5235;DP4=2432,2552,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.45593e-07;MQSB=0.977618;RPB=0.669782;SGB=43.8747;VDB=0.548476;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.12:9130182 chr12:009130182 0 W/9130182-9130182 FN1049-S Single Base Substitution G-A INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2121-S.SNP.12:9130653 chr12:009130653 0 W/9130653-9130653 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.00625039;DP=3903;DP4=2106,1758,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.43289e-06;MQSB=0.999958;RPB=0.941314;SGB=-145.773;VDB=0.0680695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2229-S.SNP.12:9137473 chr12:009137473 0 W/9137473-9137473 FN2229-S SNP T -> A AC=1;AN=190;BQB=0.969044;DP=3562;DP4=1424,1710,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000280741;MQB=8.02502e-05;MQSB=0.0742196;RPB=0.704476;SGB=53.8699;VDB=0.745488;EFF=INTERGENIC(MODIFIER||||||||||1) FN1284-S.SNP.12:9157888 chr12:009157888 0 W/9157888-9157888 FN1284-S Single Base Substitution C-A STOP_GAINED HET LOC_Os12g16060 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN2126-S.SNP.12:9164999 chr12:009164999 0 W/9164999-9164999 FN2126-S SNP C -> A AC=1;AN=168;BQB=0.544154;DP=3673;DP4=1801,1842,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.4699e-06;MQSB=0.950763;RPB=0.387421;SGB=-16.2342;VDB=0.4157;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.12:9173871 chr12:009173871 0 W/9173871-9173871 FN3522-S SNP C -> A AC=1;AN=188;BQB=0.851588;DP=2922;DP4=1671,1167,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00924025;MQB=0.000151754;MQSB=1.481e-07;RPB=0.654799;SGB=53.5223;VDB=0.7156;EFF=INTRON(MODIFIER||||845|LOC_Os12g16080|protein_coding|CODING|LOC_Os12g16080.1|1|1) FN_1017-1.SNP.12:9176942 chr12:009176942 0 W/9176942-9176942 FN_1017-1 Single Base Substitution A-T HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN2397.SNP.12:9178330 chr12:009178330 0 W/9178330-9178330 FN2397 SNP G -> T AC=1;AN=200;BQB=0.877633;DP=4389;DP4=2198,1870,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.82652e-10;MQSB=0.665162;RPB=0.433787;SGB=65.5058;VDB=0.314075;EFF=INTRON(MODIFIER||||845|LOC_Os12g16080|protein_coding|CODING|LOC_Os12g16080.1|1|1) FN2611-S.SNP.12:9179287 chr12:009179287 0 W/9179287-9179287 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.211864;DP=5322;DP4=2603,2483,15,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.92734e-15;MQSB=0.998607;RPB=0.979374;SGB=60.747;VDB=0.792842;EFF=INTRON(MODIFIER||||845|LOC_Os12g16080|protein_coding|CODING|LOC_Os12g16080.1|1|1) FN389-S.SNP.12:9181290 chr12:009181290 0 W/9181290-9181290 FN389-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g16080 expressed protein SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN1257-S.SNP.12:9184263 chr12:009184263 0 W/9184263-9184263 FN1257-S Single Base Substitution C-T INTERGENIC HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1203-S.SNP.12:9184284 chr12:009184284 0 W/9184284-9184284 FN1203-S Single Base Substitution G-C INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-74.SNP.12:9186383 chr12:009186383 0 W/9186383-9186383 FN-74 Single Base Substitution G-T INTERGENIC HOMO SNo: 74, Mutant_ID: FN-74, Generation: M2, Mutations: 47, Genes: 115, Seed availability: Yes. FN1062-S.SNP.12:9188352 chr12:009188352 0 W/9188352-9188352 FN1062-S Single Base Substitution T-G INTERGENIC HOMO SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN425-S.SNP.12:9194365 chr12:009194365 0 W/9194365-9194365 FN425-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN1416-S.SNP.12:9199365 chr12:009199365 0 W/9199365-9199365 FN1416-S Single Base Substitution C-A INTRON HET SNo: 1193, Mutant_ID: FN1416-S, Generation: M2, Mutations: 76, Genes: 78, Seed availability: No. FN2579-S.SNP.12:9199714 chr12:009199714 0 W/9199714-9199714 FN2579-S SNP G -> A AC=1;AN=198;BQB=0.898764;DP=4718;DP4=2055,2367,25,11;HOB=5.10152e-05;ICB=0.000102546;MQ=28;MQ0F=0.0875371;MQB=0.633452;MQSB=1.00076e-33;RPB=0.56108;SGB=-83.7086;VDB=0.903849;EFF=INTRON(MODIFIER||||884|LOC_Os12g16110|protein_coding|CODING|LOC_Os12g16110.1|4|1) FN2735-S.SNP.12:9201439 chr12:009201439 0 W/9201439-9201439 FN2735-S SNP G -> T AC=1;AN=200;BQB=0.87708;DP=4669;DP4=2020,2331,9,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81003e-07;MQSB=0.99922;RPB=0.0652891;SGB=29.4541;VDB=0.0209956;EFF=INTERGENIC(MODIFIER||||||||||1) FN3992-S.SNP.12:9203871 chr12:009203871 0 W/9203871-9203871 FN3992-S SNP A -> G AC=2;AN=168;BQB=0.91515;DP=2358;DP4=1093,1159,13,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.54521e-12;MQSB=0.854916;RPB=0.998327;SGB=83.1885;VDB=0.812383;EFF=INTERGENIC(MODIFIER||||||||||1) FN-263.SNP.12:9204225 chr12:009204225 0 W/9204225-9204225 FN-263 Single Base Substitution C-A INTERGENIC HOMO SNo: 262, Mutant_ID: FN-263, Generation: M2, Mutations: 26, Genes: 4, Seed availability: Yes. FN678-S.SNP.12:9214881 chr12:009214881 0 W/9214881-9214881 FN678-S Single Base Substitution A-T INTERGENIC HOMO SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. 705-6.SNP.12:9220277 chr12:009220277 0 W/9220277-9220277 705-6 Single Base Substitution A-G INTERGENIC Homo SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1690-S.SNP.12:9221276 chr12:009221276 0 W/9221276-9221276 FN1690-S SNP C -> T AC=1;AN=188;BQB=0.308944;DP=3257;DP4=1629,1590,10,4;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=0.0719486;MQSB=0.643312;RPB=0.996835;SGB=20.9896;VDB=0.817546;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R1184Q|1410|LOC_Os12g16150|protein_coding|CODING|LOC_Os12g16150.1|9|1) FN2630-S.SNP.12:9227743 chr12:009227743 0 W/9227743-9227743 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.950023;DP=4893;DP4=2274,2353,12,12;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00286123;MQB=0.0148848;MQSB=0.131261;RPB=0.999995;SGB=47.7211;VDB=0.607099;EFF=INTERGENIC(MODIFIER||||||||||1) FN2349.SNP.12:9228245 chr12:009228245 0 W/9228245-9228245 FN2349 SNP G -> A AC=1;AN=192;BQB=0.920476;DP=5156;DP4=2395,2475,13,7;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0102793;MQB=0.130499;MQSB=0.00145386;RPB=0.713649;SGB=36.607;VDB=0.822674;EFF=INTERGENIC(MODIFIER||||||||||1) FN1317-S.SNP.12:9234491 chr12:009234491 0 W/9234491-9234491 FN1317-S Single Base Substitution A-C INTERGENIC HET SNo: 1120, Mutant_ID: FN1317-S, Generation: M2, Mutations: 56, Genes: 9, Seed availability: Yes. FN4146-S.SNP.12:9235332 chr12:009235332 0 W/9235332-9235332 FN4146-S SNP G -> T AC=1;AN=170;BQB=0.998632;DP=2309;DP4=1059,1175,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.57751e-09;MQSB=0.996264;RPB=0.690272;SGB=65.6427;VDB=0.105604;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.12:9245366 chr12:009245366 0 W/9245366-9245366 FN3549-S SNP A -> T AC=1;AN=188;BQB=0.995681;DP=2491;DP4=1042,1343,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.25802e-07;MQSB=0.999959;RPB=0.92499;SGB=44.4357;VDB=0.389077;EFF=INTERGENIC(MODIFIER||||||||||1) FN3549-S.SNP.12:9245367 chr12:009245367 0 W/9245367-9245367 FN3549-S SNP T -> G AC=1;AN=188;BQB=0.987707;DP=2484;DP4=1056,1344,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.67983e-08;MQSB=0.984133;RPB=0.82323;SGB=32.441;VDB=0.399491;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.12:9258164 chr12:009258164 0 W/9258164-9258164 FN1643-S Single Base Substitution G-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN3418-S.SNP.12:9261239 chr12:009261239 0 W/9261239-9261239 FN3418-S SNP A -> G AC=2;AN=184;BQB=0.475248;DP=2901;DP4=1476,1170,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.8475e-10;MQSB=0.932453;RPB=0.017788;SGB=-39.0996;VDB=0.759894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3573-S.SNP.12:9262774 chr12:009262774 0 W/9262774-9262774 FN3573-S SNP A -> T AC=2;AN=188;BQB=0.938814;DP=2585;DP4=1168,1269,14,15;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=2.82728e-17;MQSB=0.026083;RPB=0.677671;SGB=126.215;VDB=0.272024;EFF=INTERGENIC(MODIFIER||||||||||1) FN2692-S.SNP.12:9280110 chr12:009280110 0 W/9280110-9280110 FN2692-S SNP G -> A AC=1;AN=200;BQB=0.317357;DP=5165;DP4=2702,2225,18,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03346e-13;MQSB=0.996826;RPB=0.462919;SGB=91.1059;VDB=0.117156;EFF=INTRON(MODIFIER||||314|LOC_Os12g16220|protein_coding|CODING|LOC_Os12g16220.2|2|1),INTRON(MODIFIER||||134|LOC_Os12g16220|protein_coding|CODING|LOC_Os12g16220.3|1|1) FN490-S.SNP.12:9292667 chr12:009292667 0 W/9292667-9292667 FN490-S Single Base Substitution C-T INTERGENIC HET SNo: 488, Mutant_ID: FN490-S, Generation: M2, Mutations: 74, Genes: 57, Seed availability: Yes. FN3869-S.SNP.12:9293109 chr12:009293109 0 W/9293109-9293109 FN3869-S SNP G -> A AC=2;AN=158;BQB=0.705022;DP=2272;DP4=1118,1068,13,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.21458e-11;MQSB=0.994624;RPB=0.924905;SGB=42.7743;VDB=0.730628;EFF=INTERGENIC(MODIFIER||||||||||1) FN4249-S.SNP.12:9293633 chr12:009293633 0 W/9293633-9293633 FN4249-S SNP C -> T AC=1;AN=170;BQB=0.998984;DP=2332;DP4=899,1378,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.17508e-05;MQSB=0.999932;RPB=0.869042;SGB=30.1021;VDB=0.391871;EFF=INTERGENIC(MODIFIER||||||||||1) FN1113-S.SNP.12:9294668 chr12:009294668 0 W/9294668-9294668 FN1113-S Single Base Substitution C-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3549-S.SNP.12:9296418 chr12:009296418 0 W/9296418-9296418 FN3549-S SNP G -> C AC=1;AN=188;BQB=0.979626;DP=2884;DP4=1334,1358,6,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.49429e-07;MQSB=0.901702;RPB=0.952526;SGB=43.0708;VDB=0.413038;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.12:9298985 chr12:009298985 0 W/9298985-9298985 FN1182-S Single Base Substitution G-A INTRON HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN-176.SNP.12:9300419 chr12:009300419 0 W/9300419-9300419 FN-176 Single Base Substitution A-G INTRON HET SNo: 176, Mutant_ID: FN-176, Generation: M2, Mutations: 34, Genes: 16, Seed availability: Yes. FN2431.SNP.12:9304739 chr12:009304739 0 W/9304739-9304739 FN2431 SNP T -> A AC=1;AN=200;BQB=0.96332;DP=4741;DP4=2271,2202,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.84576e-10;MQSB=0.923599;RPB=0.770144;SGB=42.5108;VDB=0.490154;EFF=INTRON(MODIFIER||||99|LOC_Os12g16280|protein_coding|CODING|LOC_Os12g16280.1|11|1) FN2120-S.SNP.12:9305383 chr12:009305383 0 W/9305383-9305383 FN2120-S SNP C -> A AC=1;AN=168;BQB=0.478324;DP=4164;DP4=2135,1986,18,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000240154;MQB=7.64966e-17;MQSB=0.999918;RPB=0.680076;SGB=-82.1908;VDB=0.0941022;EFF=INTRON(MODIFIER||||99|LOC_Os12g16280|protein_coding|CODING|LOC_Os12g16280.1|10|1) FN2332.SNP.12:9320822 chr12:009320822 0 W/9320822-9320822 FN2332 SNP A -> G AC=1;AN=192;BQB=0.999447;DP=5022;DP4=2652,2010,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.9623e-15;MQSB=0.905742;RPB=0.862847;SGB=64.8148;VDB=0.484271;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.12:9324964 chr12:009324964 0 W/9324964-9324964 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.898196;DP=2479;DP4=1267,1170,4,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.01639e-05;MQSB=0.966703;RPB=0.997437;SGB=35.0899;VDB=0.890922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.12:9328952 chr12:009328952 0 W/9328952-9328952 FN2534-S SNP C -> T AC=1;AN=198;BQB=0.938152;DP=3690;DP4=1548,1647,8,2;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000496225;MQSB=0.277826;RPB=0.990438;SGB=40.3588;VDB=0.0118093;EFF=INTERGENIC(MODIFIER||||||||||1) FN3899-S.SNP.12:9329176 chr12:009329176 0 W/9329176-9329176 FN3899-S SNP G -> A AC=1;AN=158;BQB=0.793756;DP=2035;DP4=1092,844,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.00232245;MQSB=0.0135329;RPB=0.992627;SGB=20.5959;VDB=0.511505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1394-S.SNP.12:9334460 chr12:009334460 0 W/9334460-9334460 FN1394-S Single Base Substitution G-A INTRON HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN2263-S.SNP.12:9334791 chr12:009334791 0 W/9334791-9334791 FN2263-S SNP A -> G AC=2;AN=190;BQB=0.916816;DP=3656;DP4=1729,1433,21,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.47383e-17;MQSB=0.332886;RPB=0.733376;SGB=82.3989;VDB=0.971558;EFF=INTRON(MODIFIER||||267|LOC_Os12g16320|protein_coding|CODING|LOC_Os12g16320.1|1|1) FN4271-S.SNP.12:9359271 chr12:009359271 0 W/9359271-9359271 FN4271-S SNP T -> A AC=1;AN=170;BQB=0.328378;DP=2466;DP4=1091,1280,6,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.87551e-07;MQSB=0.798189;RPB=0.543496;SGB=38.3207;VDB=0.812925;EFF=INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.10|9|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.11|9|1),INTRON(MODIFIER||||344|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.12|5|1),INTRON(MODIFIER||||297|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.13|5|1),INTRON(MODIFIER||||282|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.14|9|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.15|8|1),INTRON(MODIFIER||||614|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.1|8|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.4|9|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.5|8|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.7|9|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.8|9|1),INTRON(MODIFIER||||373|LOC_Os12g16350|protein_coding|CODING|LOC_Os12g16350.9|9|1) FN1224-S.SNP.12:9365117 chr12:009365117 0 W/9365117-9365117 FN1224-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2483.SNP.12:9367766 chr12:009367766 0 W/9367766-9367766 FN2483 SNP G -> A AC=1;AN=200;BQB=0.998189;DP=3981;DP4=2030,1753,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.09233e-05;MQSB=0.964833;RPB=0.230152;SGB=35.8441;VDB=0.437652;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.12:9370373 chr12:009370373 0 W/9370373-9370373 FN4165-S SNP A -> T AC=1;AN=170;BQB=0.684311;DP=2053;DP4=846,1113,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000821207;MQSB=0.361614;RPB=0.676412;SGB=7.67082;VDB=0.293521;EFF=INTERGENIC(MODIFIER||||||||||1) FN2685-S.SNP.12:9371260 chr12:009371260 0 W/9371260-9371260 FN2685-S SNP G -> C AC=1;AN=200;BQB=0.918597;DP=4989;DP4=2062,2616,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.06024e-06;MQSB=0.95296;RPB=0.603672;SGB=6.27959;VDB=0.435229;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.12:9372872 chr12:009372872 0 W/9372872-9372872 FN-206 Single Base Substitution A-T INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN3667-S.SNP.12:9373698 chr12:009373698 0 W/9373698-9373698 FN3667-S SNP G -> A AC=1;AN=190;BQB=0.948692;DP=2818;DP4=1304,1398,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.36349e-07;MQSB=0.699;RPB=0.642679;SGB=28.9929;VDB=0.261569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.12:9381659 chr12:009381659 0 W/9381659-9381659 FN1430-S Single Base Substitution C-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2419.SNP.12:9389047 chr12:009389047 0 W/9389047-9389047 FN2419 SNP G -> A AC=1;AN=200;BQB=0.806169;DP=4136;DP4=1817,2033,8,7;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0280464;MQB=0.269293;MQSB=0.134186;RPB=0.441518;SGB=-14.9257;VDB=0.822343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A836T|880|LOC_Os12g16400|protein_coding|CODING|LOC_Os12g16400.1|8|1) FN1031-S.SNP.12:9389702 chr12:009389702 0 W/9389702-9389702 FN1031-S Single Base Substitution A-G INTERGENIC HOMO SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN2219-S.SNP.12:9390808 chr12:009390808 0 W/9390808-9390808 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.807415;DP=4773;DP4=2572,1832,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.95304e-08;MQSB=0.982364;RPB=0.561774;SGB=53.6492;VDB=0.837936;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.12:9392927 chr12:009392927 0 W/9392927-9392927 FN3930-S SNP T -> G AC=1;AN=158;BQB=0.142315;DP=2395;DP4=1019,1266,6,13;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.54387e-06;MQSB=0.989883;RPB=0.983888;SGB=77.6532;VDB=0.87377;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.12:9400635 chr12:009400635 0 W/9400635-9400635 FN2313 SNP C -> T AC=1;AN=192;BQB=0.527409;DP=5062;DP4=2545,2238,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.79755e-05;MQSB=0.261853;RPB=0.367595;SGB=5.79046;VDB=0.959025;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.12:9406899 chr12:009406899 0 W/9406899-9406899 FN3610-S SNP C -> T AC=1;AN=190;BQB=0.0733711;DP=2532;DP4=1315,1077,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.00695991;MQSB=7.55992e-14;RPB=0.411648;SGB=10.8904;VDB=0.737658;EFF=INTERGENIC(MODIFIER||||||||||1) FN-175.SNP.12:9414277 chr12:009414277 0 W/9414277-9414277 FN-175 Single Base Substitution A-T INTERGENIC HET SNo: 175, Mutant_ID: FN-175, Generation: M2, Mutations: 81, Genes: 90, Seed availability: Yes. FN1449-S.SNP.12:9415473 chr12:009415473 0 W/9415473-9415473 FN1449-S Single Base Substitution C-T STOP_GAINED HOMO LOC_Os12g16440 retrotransposon protein, putative, unclassified, expressed SNo: 1219, Mutant_ID: FN1449-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: No. FN2377.SNP.12:9419244 chr12:009419244 0 W/9419244-9419244 FN2377 SNP G -> T AC=1;AN=192;BQB=0.160312;DP=4215;DP4=2327,1690,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00782918;MQB=0.00093173;MQSB=1.51346e-12;RPB=0.287417;SGB=50.4731;VDB=0.187325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E45D|1335|LOC_Os12g16450|protein_coding|CODING|LOC_Os12g16450.1|2|1) FN3388-S.SNP.12:9420718 chr12:009420718 0 W/9420718-9420718 FN3388-S SNP G -> T AC=1;AN=184;BQB=0.922407;DP=3526;DP4=1700,1696,6,10;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00226886;MQB=0.000109734;MQSB=0.0931955;RPB=0.611725;SGB=25.7969;VDB=0.133537;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Tgt|G376C|1335|LOC_Os12g16450|protein_coding|CODING|LOC_Os12g16450.1|3|1) FN2488.SNP.12:9422853 chr12:009422853 0 W/9422853-9422853 FN2488 SNP T -> G AC=1;AN=200;BQB=0.735097;DP=4353;DP4=2020,1928,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.30428e-10;MQSB=0.966141;RPB=0.999975;SGB=72.6852;VDB=0.0684165;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcG|A1087|1335|LOC_Os12g16450|protein_coding|CODING|LOC_Os12g16450.1|3|1) FN728-S.SNP.12:9423665 chr12:009423665 0 W/9423665-9423665 FN728-S Single Base Substitution G-A INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2535-S.SNP.12:9424739 chr12:009424739 0 W/9424739-9424739 FN2535-S SNP C -> T AC=2;AN=198;BQB=0.85462;DP=3283;DP4=1665,1429,5,10;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0.00517819;MQB=0.000288054;MQSB=0.000274357;RPB=0.93895;SGB=43.7442;VDB=0.587892;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P383|517|LOC_Os12g16460|protein_coding|CODING|LOC_Os12g16460.1|1|1) FN2648-S.SNP.12:9427676 chr12:009427676 0 W/9427676-9427676 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.837629;DP=5012;DP4=2525,2252,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.03103e-11;MQSB=0.980981;RPB=0.543873;SGB=72.6852;VDB=0.654779;EFF=INTERGENIC(MODIFIER||||||||||1) FN3357-S.SNP.12:9437285 chr12:009437285 0 W/9437285-9437285 FN3357-S SNP T -> A AC=1;AN=184;BQB=0.723584;DP=2070;DP4=1220,797,9,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.75424e-07;MQSB=0.798866;RPB=0.871161;SGB=20.7533;VDB=0.797938;EFF=INTRON(MODIFIER||||239|LOC_Os12g16480|protein_coding|CODING|LOC_Os12g16480.1|2|1) FN2580-S.SNP.12:9441875 chr12:009441875 0 W/9441875-9441875 FN2580-S SNP C -> G AC=1;AN=198;BQB=0.983005;DP=4032;DP4=1919,1832,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.40465e-06;MQSB=0.652253;RPB=0.899218;SGB=44.9538;VDB=0.342371;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tGg|S783W|1189|LOC_Os12g16490|protein_coding|CODING|LOC_Os12g16490.1|4|1) FN424-S.SNP.12:9442328 chr12:009442328 0 W/9442328-9442328 FN424-S Single Base Substitution G-A INTRON HET SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN1412-S.SNP.12:9453348 chr12:009453348 0 W/9453348-9453348 FN1412-S Single Base Substitution G-T INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2721-S.SNP.12:9453348 chr12:009453348 0 W/9453348-9453348 FN2721-S SNP G -> T AC=2;AN=200;BQB=0.935444;DP=4935;DP4=2242,2302,18,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.94298e-23;MQSB=0.926406;RPB=0.671703;SGB=89.4038;VDB=0.399444;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.12:9453348 chr12:009453348 0 W/9453348-9453348 FN447-S Single Base Substitution G-T INTERGENIC HOMO SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN1475-S.SNP.12:9457353 chr12:009457353 0 W/9457353-9457353 FN1475-S Single Base Substitution T-C INTERGENIC HET SNo: 1240, Mutant_ID: FN1475-S, Generation: M2, Mutations: 87, Genes: 21, Seed availability: Yes. FN1421-S.SNP.12:9460899 chr12:009460899 0 W/9460899-9460899 FN1421-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN185-2_3_4.SNP.12:9464220 chr12:009464220 0 W/9464220-9464220 FN185-2_3_4 SNP G -> A AC=1;AN=188;BQB=0.091491;DP=3341;DP4=1497,1811,8,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.4558e-06;MQSB=0.93592;RPB=0.961104;SGB=8.62479;VDB=0.0518964;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P481S|509|LOC_Os12g16520|protein_coding|CODING|LOC_Os12g16520.1|2|1) FN2463.SNP.12:9466377 chr12:009466377 0 W/9466377-9466377 FN2463 SNP G -> T AC=2;AN=200;BQB=0.334506;DP=4228;DP4=1820,2056,14,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.03382e-16;MQSB=0.0174418;RPB=0.961295;SGB=141.763;VDB=0.844829;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A84D|509|LOC_Os12g16520|protein_coding|CODING|LOC_Os12g16520.1|1|1),UTR_5_PRIME(MODIFIER||135||75|LOC_Os12g16524|protein_coding|CODING|LOC_Os12g16524.1|1|1),UTR_5_PRIME(MODIFIER||135||60|LOC_Os12g16524|protein_coding|CODING|LOC_Os12g16524.2|1|1),UTR_5_PRIME(MODIFIER||135||58|LOC_Os12g16524|protein_coding|CODING|LOC_Os12g16524.3|1|1) FN1514-S.SNP.12:9469429 chr12:009469429 0 W/9469429-9469429 FN1514-S Single Base Substitution A-G INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2480.SNP.12:9471557 chr12:009471557 0 W/9471557-9471557 FN2480 SNP A -> G AC=1;AN=200;BQB=0.987957;DP=4830;DP4=2263,2364,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06325e-07;MQSB=0.943857;RPB=0.418847;SGB=45.0543;VDB=0.312001;EFF=INTERGENIC(MODIFIER||||||||||1) FN628-S.SNP.12:9473506 chr12:009473506 0 W/9473506-9473506 FN628-S Single Base Substitution C-T INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2650-S.SNP.12:9474124 chr12:009474124 0 W/9474124-9474124 FN2650-S SNP G -> A AC=2;AN=198;BQB=0.624066;DP=4437;DP4=1956,2207,16,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=5.81126e-21;MQSB=0.743847;RPB=0.041471;SGB=126.794;VDB=0.861733;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q69*|97|LOC_Os12g16530|protein_coding|CODING|LOC_Os12g16530.1|2|1) FN620-S.SNP.12:9477672 chr12:009477672 0 W/9477672-9477672 FN620-S Single Base Substitution C-T INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN590-S.SNP.12:9481296 chr12:009481296 0 W/9481296-9481296 FN590-S Single Base Substitution A-T INTERGENIC HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN3339-S.SNP.12:9489769 chr12:009489769 0 W/9489769-9489769 FN3339-S SNP C -> T AC=1;AN=184;BQB=0.949654;DP=2823;DP4=1231,1507,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.09209e-07;MQSB=0.997076;RPB=0.966479;SGB=25.1826;VDB=0.667402;EFF=INTRON(MODIFIER||||379|LOC_Os12g16580|protein_coding|CODING|LOC_Os12g16580.1|3|1) FN2372.SNP.12:9490430 chr12:009490430 0 W/9490430-9490430 FN2372 SNP T -> A AC=2;AN=192;BQB=0.989041;DP=5022;DP4=2143,2462,32,36;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.62963e-38;MQSB=0.279051;RPB=0.2703;SGB=14.5774;VDB=0.611291;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.12:9490431 chr12:009490431 0 W/9490431-9490431 FN2372 SNP G -> A AC=2;AN=192;BQB=0.000540516;DP=5031;DP4=2125,2276,33,57;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=1.43332e-40;MQSB=0.40291;RPB=0.00865786;SGB=-736.254;VDB=0.467137;EFF=INTERGENIC(MODIFIER||||||||||1) 703-5.SNP.12:9491177 chr12:009491177 0 W/9491177-9491177 703-5 Single Base Substitution G-T INTERGENIC Homo SNo: 1454, Mutant_ID: 703-5, Generation: M2, Mutations: 14, Genes: 15, Seed availability: No. FN-171.SNP.12:9493406 chr12:009493406 0 W/9493406-9493406 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3949-S.SNP.12:9504115 chr12:009504115 0 W/9504115-9504115 FN3949-S SNP G -> C AC=1;AN=168;BQB=0.662139;DP=837;DP4=588,165,4,3;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.0031667;MQSB=4.6919e-07;RPB=0.332061;SGB=25.5891;VDB=0.640324;EFF=INTRON(MODIFIER||||64|LOC_Os12g16610|protein_coding|CODING|LOC_Os12g16610.1|1|1) FN3524-S.SNP.12:9518113 chr12:009518113 0 W/9518113-9518113 FN3524-S SNP C -> A AC=1;AN=188;BQB=0.643386;DP=3316;DP4=1338,1839,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.94269e-10;MQSB=0.375161;RPB=0.644946;SGB=46.6141;VDB=0.825798;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.12:9518143 chr12:009518143 0 W/9518143-9518143 FN417-S Single Base Substitution G-A INTERGENIC HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN_812-4-1.SNP.12:9519717 chr12:009519717 0 W/9519717-9519717 FN_812-4-1 Single Base Substitution T-C Homo LOC_Os12g16630 retrotransposon protein, putative, unclassified, expressed SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN-332.SNP.12:9528025 chr12:009528025 0 W/9528025-9528025 FN-332 Single Base Substitution G-T INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1287-S.SNP.12:9529143 chr12:009529143 0 W/9529143-9529143 FN1287-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g16640 expressed protein SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN2249-S.SNP.12:9531072 chr12:009531072 0 W/9531072-9531072 FN2249-S SNP G -> C AC=1;AN=190;BQB=0.0531796;DP=3409;DP4=2135,1005,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0778589;MQSB=1.19815e-08;RPB=0.622648;SGB=-2.10437;VDB=0.847359;EFF=INTERGENIC(MODIFIER||||||||||1) FN3675-S.SNP.12:9533630 chr12:009533630 0 W/9533630-9533630 FN3675-S SNP C -> T AC=1;AN=190;BQB=0.834643;DP=3133;DP4=1633,1350,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04401e-12;MQSB=0.92507;RPB=0.361177;SGB=-11.0065;VDB=0.606786;EFF=INTRON(MODIFIER||||837|LOC_Os12g16650|protein_coding|CODING|LOC_Os12g16650.1|1|1),INTRON(MODIFIER||||794|LOC_Os12g16650|protein_coding|CODING|LOC_Os12g16650.2|1|1) FN413-S.SNP.12:9536389 chr12:009536389 0 W/9536389-9536389 FN413-S Single Base Substitution A-G INTRON HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN591-S.SNP.12:9542926 chr12:009542926 0 W/9542926-9542926 FN591-S Single Base Substitution G-C INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN1545-S.SNP.12:9549667 chr12:009549667 0 W/9549667-9549667 FN1545-S Single Base Substitution A-T INTERGENIC Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2681-S.SNP.12:9550822 chr12:009550822 0 W/9550822-9550822 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.851061;DP=4355;DP4=2086,2059,13,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.1136e-17;MQSB=0.951078;RPB=0.907701;SGB=87.1368;VDB=0.859995;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.12:9550823 chr12:009550823 0 W/9550823-9550823 FN2681-S SNP G -> A AC=1;AN=200;BQB=0.936641;DP=4350;DP4=2061,2062,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.14487e-15;MQSB=0.983546;RPB=0.936919;SGB=83.5316;VDB=0.943195;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.12:9554469 chr12:009554469 0 W/9554469-9554469 FN2549-S SNP T -> C AC=1;AN=198;BQB=0.49801;DP=4164;DP4=1802,2154,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000651309;MQSB=0.993148;RPB=0.983065;SGB=8.58354;VDB=0.952681;EFF=INTERGENIC(MODIFIER||||||||||1) FN2342.SNP.12:9564778 chr12:009564778 0 W/9564778-9564778 FN2342 SNP G -> A AC=1;AN=192;BQB=0.990203;DP=4816;DP4=2006,2520,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.46905e-08;MQSB=0.98813;RPB=0.801463;SGB=-0.46693;VDB=0.830975;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.12:9575354 chr12:009575354 0 W/9575354-9575354 FN3532-S SNP A -> T AC=1;AN=188;BQB=0.999354;DP=2561;DP4=1282,1182,13,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.47522e-13;MQSB=0.99515;RPB=0.414647;SGB=94.4119;VDB=0.948184;EFF=INTRON(MODIFIER||||966|LOC_Os12g16710|protein_coding|CODING|LOC_Os12g16710.1|6|1) FN401-S.SNP.12:9577248 chr12:009577248 0 W/9577248-9577248 FN401-S Single Base Substitution G-T INTRON HET SNo: 389, Mutant_ID: FN401-S, Generation: M2, Mutations: 48, Genes: 32, Seed availability: Yes. FN3764-S.SNP.12:9581331 chr12:009581331 0 W/9581331-9581331 FN3764-S SNP A -> G AC=1;AN=190;BQB=0.969263;DP=2746;DP4=1370,1242,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.56651e-07;MQSB=0.98596;RPB=0.292243;SGB=2.55724;VDB=0.130645;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F124S|523|LOC_Os12g16720|protein_coding|CODING|LOC_Os12g16720.1|1|1) FN2378.SNP.12:9585570 chr12:009585570 0 W/9585570-9585570 FN2378 SNP T -> C AC=1;AN=192;BQB=0.170251;DP=5100;DP4=2376,2429,10,26;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.13011e-18;MQSB=0.600934;RPB=0.996674;SGB=77.6365;VDB=0.430535;EFF=INTERGENIC(MODIFIER||||||||||1) FN1662-S.SNP.12:9590142 chr12:009590142 0 W/9590142-9590142 FN1662-S Single Base Substitution G-A INTRON HET SNo: 1362, Mutant_ID: FN1662-S, Generation: M2, Mutations: 87, Genes: 32, Seed availability: Yes. FN4020-S.SNP.12:9590711 chr12:009590711 0 W/9590711-9590711 FN4020-S SNP C -> T AC=1;AN=168;BQB=0.553277;DP=2793;DP4=1238,1444,12,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.18183e-08;MQSB=0.10667;RPB=0.65903;SGB=12.7756;VDB=0.261871;EFF=INTERGENIC(MODIFIER||||||||||1) FN3312-S.SNP.12:9590770 chr12:009590770 0 W/9590770-9590770 FN3312-S SNP G -> A AC=1;AN=184;BQB=0.402002;DP=3132;DP4=1478,1553,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000319285;MQB=8.36527e-05;MQSB=0.0501039;RPB=0.254918;SGB=44.2207;VDB=0.878897;EFF=INTERGENIC(MODIFIER||||||||||1) FN-410.SNP.12:9593258 chr12:009593258 0 W/9593258-9593258 FN-410 Single Base Substitution T-C INTERGENIC HET SNo: 406, Mutant_ID: FN-410, Generation: M2, Mutations: 78, Genes: 110, Seed availability: Yes. FN2267-S.SNP.12:9596896 chr12:009596896 0 W/9596896-9596896 FN2267-S SNP G -> A AC=1;AN=190;BQB=0.95857;DP=4109;DP4=2355,1326,13,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00170358;MQB=0.00936323;MQSB=0.251278;RPB=0.998486;SGB=18.096;VDB=0.84165;EFF=INTERGENIC(MODIFIER||||||||||1) FN4143-S.SNP.12:9605134 chr12:009605134 0 W/9605134-9605134 FN4143-S SNP A -> G AC=1;AN=170;BQB=0.206309;DP=1797;DP4=1225,532,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=30;MQ0F=0.171397;MQB=0.723168;MQSB=0;RPB=0.760008;SGB=27.9928;VDB=0.999183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E1900G|1913|LOC_Os12g16750|protein_coding|CODING|LOC_Os12g16750.1|5|1) FN3347-S.SNP.12:9614780 chr12:009614780 0 W/9614780-9614780 FN3347-S SNP G -> C AC=1;AN=184;BQB=0.986325;DP=3356;DP4=1441,1758,13,18;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.99495e-18;MQSB=0.879615;RPB=0.965241;SGB=134.656;VDB=0.752037;EFF=INTERGENIC(MODIFIER||||||||||1) FN1069-S.SNP.12:9630704 chr12:009630704 0 W/9630704-9630704 FN1069-S Single Base Substitution C-T INTERGENIC HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN3892-S.SNP.12:9634335 chr12:009634335 0 W/9634335-9634335 FN3892-S SNP T -> C AC=1;AN=158;BQB=0.742843;DP=2600;DP4=1318,1205,6,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00346154;MQB=4.76027e-06;MQSB=0.0109828;RPB=0.340959;SGB=11.9715;VDB=0.509155;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R629|1474|LOC_Os12g16800|protein_coding|CODING|LOC_Os12g16800.1|1|1) FN2551-S.SNP.12:9638961 chr12:009638961 0 W/9638961-9638961 FN2551-S SNP G -> C AC=2;AN=194;BQB=0.893797;DP=4130;DP4=2017,1851,23,28;HOB=0.020406;ICB=0.494899;MQ=35;MQ0F=0.0319613;MQB=0.868742;MQSB=2.75922e-10;RPB=0.978377;SGB=228.759;VDB=0.74219;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.12:9640055 chr12:009640055 0 W/9640055-9640055 FN2112-S SNP G -> T AC=1;AN=168;BQB=0.72147;DP=1440;DP4=816,564,8,5;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.000694444;MQB=0.00091193;MQSB=0.706733;RPB=0.998186;SGB=17.3231;VDB=0.749574;EFF=INTERGENIC(MODIFIER||||||||||1) FN524-S.SNP.12:9640055 chr12:009640055 0 W/9640055-9640055 FN524-S Single Base Substitution G-T INTERGENIC HOMO SNo: 522, Mutant_ID: FN524-S, Generation: M2, Mutations: 69, Genes: 60, Seed availability: Yes. FN1136-19-S.SNP.12:9640610 chr12:009640610 0 W/9640610-9640610 FN1136-19-S Single Base Substitution G-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2284.SNP.12:9641933 chr12:009641933 0 W/9641933-9641933 FN2284 SNP A -> G AC=1;AN=192;BQB=0.997138;DP=5275;DP4=2766,2247,16,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.22186e-17;MQSB=0.99096;RPB=0.817686;SGB=96.8096;VDB=0.832112;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.12:9642274 chr12:009642274 0 W/9642274-9642274 FN1573-S Single Base Substitution G-A INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1003-S.SNP.12:9645094 chr12:009645094 0 W/9645094-9645094 FN1003-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g16820 retrotransposon protein, putative, unclassified, expressed SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN3464-S.SNP.12:9645747 chr12:009645747 0 W/9645747-9645747 FN3464-S SNP C -> T AC=1;AN=184;BQB=0.895441;DP=2564;DP4=1284,1199,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01162e-07;MQSB=0.780275;RPB=0.802592;SGB=48.7425;VDB=0.0875195;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A448V|687|LOC_Os12g16820|protein_coding|CODING|LOC_Os12g16820.1|3|1) FN2289.SNP.12:9650449 chr12:009650449 0 W/9650449-9650449 FN2289 SNP G -> A AC=1;AN=192;BQB=0.808077;DP=4961;DP4=2364,2177,9,15;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0124975;MQB=2.08474e-09;MQSB=0.00153662;RPB=0.999461;SGB=75.4235;VDB=0.34155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3450-S.SNP.12:9653127 chr12:009653127 0 W/9653127-9653127 FN3450-S SNP G -> A AC=1;AN=184;BQB=0.978903;DP=2955;DP4=1312,1547,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0230118;MQB=0.627262;MQSB=0.00488856;RPB=0.924728;SGB=25.1826;VDB=0.282457;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.12:9655062 chr12:009655062 0 W/9655062-9655062 FN4037-S SNP C -> T AC=1;AN=168;BQB=0.944391;DP=2746;DP4=1272,1335,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0287691;MQB=5.85129e-06;MQSB=0.927137;RPB=0.445961;SGB=41.6096;VDB=0.579506;EFF=INTERGENIC(MODIFIER||||||||||1) FN4037-S.SNP.12:9655063 chr12:009655063 0 W/9655063-9655063 FN4037-S SNP C -> T AC=1;AN=168;BQB=0.79223;DP=2743;DP4=1250,1327,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0277069;MQB=3.39184e-05;MQSB=0.974131;RPB=0.565063;SGB=41.6096;VDB=0.61005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-235.SNP.12:9657317 chr12:009657317 0 W/9657317-9657317 FN-235 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN3832-S.SNP.12:9658301 chr12:009658301 0 W/9658301-9658301 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.954288;DP=3327;DP4=1455,1749,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.08695e-14;MQSB=0.70921;RPB=0.778648;SGB=44.0907;VDB=0.892946;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D579|1399|LOC_Os12g16840|protein_coding|CODING|LOC_Os12g16840.1|2|1) FN421-S.SNP.12:9675855 chr12:009675855 0 W/9675855-9675855 FN421-S Single Base Substitution A-T INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1272-S.SNP.12:9680358 chr12:009680358 0 W/9680358-9680358 FN1272-S Single Base Substitution A-C INTERGENIC HET SNo: 1086, Mutant_ID: FN1272-S, Generation: M2, Mutations: 77, Genes: 68, Seed availability: Yes. FN2659-S.SNP.12:9681578 chr12:009681578 0 W/9681578-9681578 FN2659-S SNP C -> T AC=1;AN=200;BQB=0.848307;DP=4957;DP4=2841,1821,19,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.84847e-17;MQSB=0.56307;RPB=0.355483;SGB=127.947;VDB=0.562963;EFF=INTERGENIC(MODIFIER||||||||||1) FN2534-S.SNP.12:9684255 chr12:009684255 0 W/9684255-9684255 FN2534-S SNP G -> A AC=1;AN=186;BQB=0.99911;DP=3397;DP4=1572,1590,7,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.000883132;MQB=2.2258e-08;MQSB=0.999717;RPB=0.694108;SGB=2.96892;VDB=0.650373;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.12:9689602 chr12:009689602 0 W/9689602-9689602 FN814-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1327-S.SNP.12:9699801 chr12:009699801 0 W/9699801-9699801 FN1327-S Single Base Substitution C-T INTERGENIC HET SNo: 1130, Mutant_ID: FN1327-S, Generation: M2, Mutations: 72, Genes: 94, Seed availability: Yes. FN1413-S.SNP.12:9700724 chr12:009700724 0 W/9700724-9700724 FN1413-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g16920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2550-S.SNP.12:9701390 chr12:009701390 0 W/9701390-9701390 FN2550-S SNP A -> G AC=2;AN=186;BQB=0.684339;DP=3652;DP4=1721,1712,6,7;HOB=0.0212741;ICB=0.494682;MQ=48;MQ0F=0.00191676;MQB=7.82458e-06;MQSB=0.287399;RPB=0.563398;SGB=54.144;VDB=0.397553;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L468|795|LOC_Os12g16920|protein_coding|CODING|LOC_Os12g16920.1|3|1) FN2479.SNP.12:9707158 chr12:009707158 0 W/9707158-9707158 FN2479 SNP G -> A AC=1;AN=200;BQB=0.948527;DP=4702;DP4=2177,2219,12,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00148873;MQB=5.16703e-06;MQSB=0.0244199;RPB=0.21762;SGB=29.4849;VDB=0.639126;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.12:9711273 chr12:009711273 0 W/9711273-9711273 FN1452-S Single Base Substitution G-C INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN885-S.SNP.12:9713357 chr12:009713357 0 W/9713357-9713357 FN885-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g16960 retrotransposon protein, putative, unclassified, expressed SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN890-S.SNP.12:9714669 chr12:009714669 0 W/9714669-9714669 FN890-S Single Base Substitution C-T INTRON HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN704-S.SNP.12:9715528 chr12:009715528 0 W/9715528-9715528 FN704-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g16960 retrotransposon protein, putative, unclassified, expressed SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2157-S.SNP.12:9716659 chr12:009716659 0 W/9716659-9716659 FN2157-S SNP T -> A AC=1;AN=168;BQB=0.674425;DP=2385;DP4=1654,704,8,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.19689e-05;MQSB=0.975278;RPB=0.850802;SGB=38.8805;VDB=0.297266;EFF=INTERGENIC(MODIFIER||||||||||1) FN-345.SNP.12:9725374 chr12:009725374 0 W/9725374-9725374 FN-345 Single Base Substitution G-A INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN4247-S.SNP.12:9725645 chr12:009725645 0 W/9725645-9725645 FN4247-S SNP A -> T AC=1;AN=170;BQB=0.969809;DP=2471;DP4=1100,1289,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00202347;MQB=1.29257e-07;MQSB=0.0385722;RPB=0.985279;SGB=52.3148;VDB=0.932042;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.12:9725647 chr12:009725647 0 W/9725647-9725647 FN4247-S SNP G -> C AC=1;AN=170;BQB=0.957842;DP=2489;DP4=1111,1306,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.00200884;MQB=1.123e-07;MQSB=0.033084;RPB=0.930866;SGB=52.3148;VDB=0.926609;EFF=INTERGENIC(MODIFIER||||||||||1) FN-43.SNP.12:9726778 chr12:009726778 0 W/9726778-9726778 FN-43 Single Base Substitution G-A INTERGENIC Homo SNo: 43, Mutant_ID: FN-43, Generation: M2, Mutations: 18, Genes: 5, Seed availability: Yes. FN-67.SNP.12:9726778 chr12:009726778 0 W/9726778-9726778 FN-67 Single Base Substitution G-A INTERGENIC HOMO SNo: 67, Mutant_ID: FN-67, Generation: M2, Mutations: 100, Genes: 20, Seed availability: Yes. FN2549-S.SNP.12:9726778 chr12:009726778 0 W/9726778-9726778 FN2549-S SNP G -> A AC=1;AN=186;BQB=0.293434;DP=2993;DP4=1233,1521,2,6;HOB=5.78101e-05;ICB=0.000116242;MQ=46;MQ0F=0.00100234;MQB=0.326375;MQSB=0.0103826;RPB=0.208633;SGB=18.5788;VDB=0.70846;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.12:9730735 chr12:009730735 0 W/9730735-9730735 FN1760-S SNP C -> T AC=2;AN=188;BQB=0.00374197;DP=2588;DP4=917,1612,8,26;HOB=0.0210502;ICB=0.494738;MQ=27;MQ0F=0.223725;MQB=0.193555;MQSB=0;RPB=0.266671;SGB=-159.372;VDB=0.985862;EFF=INTRON(MODIFIER||||126|LOC_Os12g17000|protein_coding|CODING|LOC_Os12g17000.1|1|1) FN389-S.SNP.12:9734314 chr12:009734314 0 W/9734314-9734314 FN389-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN389-S.SNP.12:9736485 chr12:009736485 0 W/9736485-9736485 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2596-S.SNP.12:9737410 chr12:009737410 0 W/9737410-9737410 FN2596-S SNP C -> T AC=1;AN=186;BQB=0.181614;DP=3512;DP4=1656,1549,5,6;HOB=5.78101e-05;ICB=0.000116242;MQ=48;MQ0F=0.000284738;MQB=0.00485417;MQSB=0.856351;RPB=0.175576;SGB=29.3637;VDB=0.610077;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A40|122|LOC_Os12g17020|protein_coding|CODING|LOC_Os12g17020.1|1|1) FN2771-S.SNP.12:9738044 chr12:009738044 0 W/9738044-9738044 FN2771-S SNP T -> G AC=1;AN=186;BQB=0.992448;DP=3412;DP4=1708,1465,12,2;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=2.52246e-08;MQSB=0.127958;RPB=0.625561;SGB=40.149;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3606-S.SNP.12:9738757 chr12:009738757 0 W/9738757-9738757 FN3606-S SNP T -> A AC=1;AN=190;BQB=0.634888;DP=2487;DP4=1388,958,7,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000402091;MQB=8.36589e-05;MQSB=0.0219862;RPB=0.288926;SGB=13.4442;VDB=0.800881;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.12:9741915 chr12:009741915 0 W/9741915-9741915 FN850-S Single Base Substitution C-G INTERGENIC HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN773-S.SNP.12:9742835 chr12:009742835 0 W/9742835-9742835 FN773-S Single Base Substitution T-C INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3750-S.SNP.12:9748367 chr12:009748367 0 W/9748367-9748367 FN3750-S SNP G -> T AC=2;AN=190;BQB=0.916043;DP=1792;DP4=919,757,13,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.57092e-10;MQSB=0.257775;RPB=0.874524;SGB=103.742;VDB=0.304345;EFF=INTERGENIC(MODIFIER||||||||||1) FN666-S.SNP.12:9751985 chr12:009751985 0 W/9751985-9751985 FN666-S Single Base Substitution C-A INTERGENIC HOMO SNo: 604, Mutant_ID: FN666-S, Generation: M2, Mutations: 71, Genes: 64, Seed availability: Yes. FN3332-S.SNP.12:9757589 chr12:009757589 0 W/9757589-9757589 FN3332-S SNP C -> T AC=1;AN=184;BQB=0.914401;DP=2858;DP4=1400,1368,8,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.05256e-07;MQSB=0.937748;RPB=0.977743;SGB=62.3078;VDB=0.251061;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.12:9761746 chr12:009761746 0 W/9761746-9761746 FN3591-S SNP C -> T AC=1;AN=188;BQB=0.852344;DP=2776;DP4=1142,1539,7,18;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=6.12784e-12;MQSB=0.0967131;RPB=0.645769;SGB=108.042;VDB=0.675768;EFF=INTERGENIC(MODIFIER||||||||||1) FN-123.SNP.12:9773084 chr12:009773084 0 W/9773084-9773084 FN-123 Single Base Substitution C-T INTERGENIC HET SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN2499.SNP.12:9774622 chr12:009774622 0 W/9774622-9774622 FN2499 SNP C -> T AC=1;AN=200;BQB=0.862835;DP=4872;DP4=2162,2303,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56184e-09;MQSB=0.795415;RPB=0.528053;SGB=61.9006;VDB=0.624511;EFF=INTERGENIC(MODIFIER||||||||||1) FN2499.SNP.12:9774753 chr12:009774753 0 W/9774753-9774753 FN2499 SNP A -> G AC=1;AN=200;BQB=0.7883;DP=5215;DP4=2434,2527,8,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.17111e-14;MQSB=0.834598;RPB=0.0768123;SGB=114.132;VDB=0.181098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1528-S.SNP.12:9781764 chr12:009781764 0 W/9781764-9781764 FN1528-S Single Base Substitution T-A INTRON HET SNo: 1279, Mutant_ID: FN1528-S, Generation: M2, Mutations: 87, Genes: 20, Seed availability: Yes. FN1727-S.SNP.12:9791088 chr12:009791088 0 W/9791088-9791088 FN1727-S SNP C -> T AC=1;AN=188;BQB=0.993635;DP=3295;DP4=1526,1698,10,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.87018e-11;MQSB=0.989766;RPB=0.512587;SGB=19.4279;VDB=0.419846;EFF=INTERGENIC(MODIFIER||||||||||1) FN4024-S.SNP.12:9791088 chr12:009791088 0 W/9791088-9791088 FN4024-S SNP C -> T AC=2;AN=168;BQB=0.953576;DP=1931;DP4=908,925,7,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.5717e-09;MQSB=0.533596;RPB=0.999708;SGB=69.8961;VDB=0.866609;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.12:9791088 chr12:009791088 0 W/9791088-9791088 FN474-S Single Base Substitution C-T INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN2752-S.SNP.12:9791407 chr12:009791407 0 W/9791407-9791407 FN2752-S SNP G -> A AC=1;AN=200;BQB=0.291664;DP=4775;DP4=2267,2119,13,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=3.05477e-05;MQSB=0.880049;RPB=0.278954;SGB=42.5108;VDB=0.569805;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.12:9792546 chr12:009792546 0 W/9792546-9792546 FN2139-S SNP G -> T AC=1;AN=168;BQB=0.190732;DP=3967;DP4=2044,1867,17,20;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0025208;MQB=2.56076e-11;MQSB=0.000503792;RPB=0.94413;SGB=-214.311;VDB=0.150485;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L594I|836|LOC_Os12g17100|protein_coding|CODING|LOC_Os12g17100.1|5|1) FN3375-S.SNP.12:9793157 chr12:009793157 0 W/9793157-9793157 FN3375-S SNP C -> G AC=1;AN=184;BQB=0.993688;DP=2830;DP4=1263,1428,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.004947;MQB=0.173727;MQSB=0.0356257;RPB=0.74888;SGB=25.1826;VDB=0.651538;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aCg|R462T|836|LOC_Os12g17100|protein_coding|CODING|LOC_Os12g17100.1|3|1) FN2169-S.SNP.12:9793993 chr12:009793993 0 W/9793993-9793993 FN2169-S SNP C -> T AC=1;AN=168;BQB=0.462929;DP=3229;DP4=1765,1418,6,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.50513e-08;MQSB=0.84733;RPB=0.670273;SGB=-14.0801;VDB=0.97658;EFF=INTRON(MODIFIER||||836|LOC_Os12g17100|protein_coding|CODING|LOC_Os12g17100.1|2|1) FN898-S.SNP.12:9796668 chr12:009796668 0 W/9796668-9796668 FN898-S Single Base Substitution G-A INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN-292.SNP.12:9803497 chr12:009803497 0 W/9803497-9803497 FN-292 Single Base Substitution G-C INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN868-S.SNP.12:9814020 chr12:009814020 0 W/9814020-9814020 FN868-S Single Base Substitution A-C INTERGENIC HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN4130-S.SNP.12:9822946 chr12:009822946 0 W/9822946-9822946 FN4130-S SNP C -> T AC=1;AN=182;BQB=0.985811;DP=3242;DP4=1561,1588,14,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.61653e-11;MQSB=0.980043;RPB=0.81925;SGB=80.1982;VDB=0.234662;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K178|338|LOC_Os12g17160|protein_coding|CODING|LOC_Os12g17160.1|2|1) FN3431-S.SNP.12:9831411 chr12:009831411 0 W/9831411-9831411 FN3431-S SNP T -> A AC=1;AN=184;BQB=0.296248;DP=3161;DP4=1841,1004,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000278146;MQSB=0.00843707;RPB=0.0927208;SGB=-54.7903;VDB=0.188422;EFF=INTERGENIC(MODIFIER||||||||||1) W443-5-1-3.SNP.12:9832336 chr12:009832336 0 W/9832336-9832336 W443-5-1-3 Single Base Substitution C-G INTRON HOMO SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN474-S.SNP.12:9835918 chr12:009835918 0 W/9835918-9835918 FN474-S Single Base Substitution G-T INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN469-S.SNP.12:9836139 chr12:009836139 0 W/9836139-9836139 FN469-S Single Base Substitution C-T INTERGENIC HET SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN3810-S.SNP.12:9842015 chr12:009842015 0 W/9842015-9842015 FN3810-S SNP C -> T AC=1;AN=190;BQB=0.976856;DP=2938;DP4=1555,1297,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0021105;MQSB=0.237415;RPB=0.806648;SGB=39.9877;VDB=0.678333;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R200K|584|LOC_Os12g17190|protein_coding|CODING|LOC_Os12g17190.1|3|1) FN1109-S.SNP.12:9846788 chr12:009846788 0 W/9846788-9846788 FN1109-S Single Base Substitution C-T INTERGENIC HET SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2729-S.SNP.12:9855012 chr12:009855012 0 W/9855012-9855012 FN2729-S SNP T -> A AC=1;AN=200;BQB=0.484197;DP=6856;DP4=3901,2523,7,14;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0859101;MQB=0.0661249;MQSB=6.98154e-33;RPB=0.0418474;SGB=14.3054;VDB=0.0861576;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggA/ggT|G138|826|LOC_Os12g17220|protein_coding|CODING|LOC_Os12g17220.1|1|1) FN1415-S.SNP.12:9855874 chr12:009855874 0 W/9855874-9855874 FN1415-S Single Base Substitution A-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN1128-S.SNP.12:9856664 chr12:009856664 0 W/9856664-9856664 FN1128-S Single Base Substitution C-T INTERGENIC HET SNo: 997, Mutant_ID: FN1128-S, Generation: M2, Mutations: 44, Genes: 50, Seed availability: Yes. FN1673-S.SNP.12:9861313 chr12:009861313 0 W/9861313-9861313 FN1673-S SNP G -> C AC=2;AN=188;BQB=0.000784611;DP=3782;DP4=1728,1994,18,31;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.92246e-20;MQSB=0.991656;RPB=0.645886;SGB=-211.223;VDB=0.401936;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.12:9862420 chr12:009862420 0 W/9862420-9862420 FN2139-S SNP A -> G AC=2;AN=168;BQB=0.0602405;DP=3169;DP4=1798,1300,27,22;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000631114;MQB=3.18227e-17;MQSB=0.0712791;RPB=0.970304;SGB=51.4076;VDB=0.802586;EFF=INTERGENIC(MODIFIER||||||||||1) FN1538-S.SNP.12:9864108 chr12:009864108 0 W/9864108-9864108 FN1538-S Single Base Substitution C-A INTERGENIC Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN2600-S.SNP.12:9864108 chr12:009864108 0 W/9864108-9864108 FN2600-S SNP C -> A AC=2;AN=198;BQB=0.745401;DP=4016;DP4=1857,1837,10,16;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.27622e-09;MQSB=0.989056;RPB=0.80339;SGB=83.2905;VDB=0.62244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3696-S.SNP.12:9864108 chr12:009864108 0 W/9864108-9864108 FN3696-S SNP C -> A AC=1;AN=190;BQB=0.99915;DP=2642;DP4=1132,1389,4,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.34684e-07;MQSB=0.98694;RPB=0.996203;SGB=18.552;VDB=0.660865;EFF=INTERGENIC(MODIFIER||||||||||1) FN4163-S.SNP.12:9864108 chr12:009864108 0 W/9864108-9864108 FN4163-S SNP C -> A AC=2;AN=170;BQB=0.911843;DP=2268;DP4=1082,1096,10,5;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.53792e-09;MQSB=0.846695;RPB=0.865144;SGB=61.2001;VDB=0.177657;EFF=INTERGENIC(MODIFIER||||||||||1) FN_809-6-1.SNP.12:9864108 chr12:009864108 0 W/9864108-9864108 FN_809-6-1 Single Base Substitution C-A Homo SNo: 1488, Mutant_ID: FN_809-6-1, Generation: M3, Mutations: 54, Genes: 26, Seed availability: Yes. FN735-S.SNP.12:9867512 chr12:009867512 0 W/9867512-9867512 FN735-S Single Base Substitution G-A INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN735-S.SNP.12:9867520 chr12:009867520 0 W/9867520-9867520 FN735-S Single Base Substitution T-A INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN3858-S.SNP.12:9872254 chr12:009872254 0 W/9872254-9872254 FN3858-S SNP G -> A AC=2;AN=158;BQB=0.993558;DP=1861;DP4=895,886,11,10;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.40676e-11;MQSB=0.980601;RPB=0.997566;SGB=86.3921;VDB=0.241055;EFF=INTERGENIC(MODIFIER||||||||||1) FN-152.SNP.12:9877549 chr12:009877549 0 W/9877549-9877549 FN-152 Single Base Substitution G-A INTERGENIC HET SNo: 152, Mutant_ID: FN-152, Generation: M2, Mutations: 42, Genes: 21, Seed availability: Yes. FN2753-S.SNP.12:9883563 chr12:009883563 0 W/9883563-9883563 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.744267;DP=5006;DP4=2420,2230,4,13;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0381542;MQB=0.103931;MQSB=1.17883e-19;RPB=0.393855;SGB=72.6852;VDB=0.0454827;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A49|435|LOC_Os12g17270|protein_coding|CODING|LOC_Os12g17270.1|1|1) FN2794-S.SNP.12:9884450 chr12:009884450 0 W/9884450-9884450 FN2794-S SNP G -> A AC=1;AN=188;BQB=0.682219;DP=3706;DP4=1934,1542,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.00593632;MQB=5.26166e-06;MQSB=0.114508;RPB=0.90829;SGB=4.56404;VDB=0.163135;EFF=INTRON(MODIFIER||||435|LOC_Os12g17270|protein_coding|CODING|LOC_Os12g17270.1|1|1) FN4098-S.SNP.12:9885035 chr12:009885035 0 W/9885035-9885035 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.989237;DP=3164;DP4=1669,1442,3,4;HOB=6.03792e-05;ICB=0.000121422;MQ=44;MQ0F=0.0414033;MQB=0.0210398;MQSB=0.97371;RPB=0.805561;SGB=26.0691;VDB=0.347872;EFF=INTRON(MODIFIER||||435|LOC_Os12g17270|protein_coding|CODING|LOC_Os12g17270.1|2|1) FN756-S.SNP.12:9890854 chr12:009890854 0 W/9890854-9890854 FN756-S Single Base Substitution G-A INTRON HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN756-S.SNP.12:9890859 chr12:009890859 0 W/9890859-9890859 FN756-S Single Base Substitution T-A INTRON HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2687-S.SNP.12:9893018 chr12:009893018 0 W/9893018-9893018 FN2687-S SNP G -> A AC=1;AN=200;BQB=0.0641946;DP=4219;DP4=1976,2003,8,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00118511;MQB=0.00320545;MQSB=0.361382;RPB=0.999709;SGB=47.4799;VDB=0.623554;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W601*|2196|LOC_Os12g17290|protein_coding|CODING|LOC_Os12g17290.1|7|1);LOF=(LOC_Os12g17290|LOC_Os12g17290|1|1.00);NMD=(LOC_Os12g17290|LOC_Os12g17290|1|1.00) FN1541-S.SNP.12:9896578 chr12:009896578 0 W/9896578-9896578 FN1541-S Single Base Substitution T-A INTRON HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN-160.SNP.12:9900328 chr12:009900328 0 W/9900328-9900328 FN-160 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g17290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN1481-S.SNP.12:9901788 chr12:009901788 0 W/9901788-9901788 FN1481-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g17300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1549-S.SNP.12:9904304 chr12:009904304 0 W/9904304-9904304 FN1549-S Single Base Substitution A-T INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN1549-S.SNP.12:9904305 chr12:009904305 0 W/9904305-9904305 FN1549-S Single Base Substitution G-T INTERGENIC Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN2484.SNP.12:9906959 chr12:009906959 0 W/9906959-9906959 FN2484 SNP A -> G AC=1;AN=200;BQB=0.162407;DP=4600;DP4=1998,2282,4,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.44115e-05;MQSB=0.961011;RPB=0.773827;SGB=40.4492;VDB=0.886355;EFF=INTERGENIC(MODIFIER||||||||||1) FN1732-S.SNP.12:9911182 chr12:009911182 0 W/9911182-9911182 FN1732-S SNP T -> G AC=2;AN=188;BQB=0.0684082;DP=2850;DP4=1583,1211,23,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.82728e-18;MQSB=0.962054;RPB=0.999919;SGB=-96.8634;VDB=0.830761;EFF=INTRON(MODIFIER||||647|LOC_Os12g17310|protein_coding|CODING|LOC_Os12g17310.1|2|1) FN672-S.SNP.12:9918515 chr12:009918515 0 W/9918515-9918515 FN672-S Single Base Substitution G-T INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN4174-S.SNP.12:9931420 chr12:009931420 0 W/9931420-9931420 FN4174-S SNP G -> A AC=2;AN=170;BQB=0.817092;DP=2514;DP4=956,1427,6,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=4.2943e-12;MQSB=0.999971;RPB=0.651572;SGB=-13.0057;VDB=0.739916;EFF=INTERGENIC(MODIFIER||||||||||1) FN661-S.SNP.12:9931646 chr12:009931646 0 W/9931646-9931646 FN661-S Single Base Substitution A-C INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2451.SNP.12:9932745 chr12:009932745 0 W/9932745-9932745 FN2451 SNP C -> T AC=2;AN=200;BQB=0.999991;DP=4281;DP4=1983,2071,2,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.2422e-09;MQSB=0.90785;RPB=0.014046;SGB=34.6953;VDB=0.0185798;EFF=INTRON(MODIFIER||||692|LOC_Os12g17350|protein_coding|CODING|LOC_Os12g17350.1|1|1) FN1008-S.SNP.12:9936424 chr12:009936424 0 W/9936424-9936424 FN1008-S Single Base Substitution T-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN2331.SNP.12:9937094 chr12:009937094 0 W/9937094-9937094 FN2331 SNP A -> T AC=1;AN=192;BQB=0.974959;DP=4985;DP4=2182,2536,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15454e-06;MQSB=0.51122;RPB=0.774707;SGB=39.78;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.12:9937982 chr12:009937982 0 W/9937982-9937982 FN2582-S SNP A -> C AC=1;AN=188;BQB=0.90938;DP=4186;DP4=1973,1993,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.49665e-08;MQSB=0.811992;RPB=0.999311;SGB=32.9588;VDB=0.669765;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.12:9947097 chr12:009947097 0 W/9947097-9947097 FN819-S Single Base Substitution A-T INTRON HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2323.SNP.12:9956921 chr12:009956921 0 W/9956921-9956921 FN2323 SNP A -> T AC=1;AN=192;BQB=0.141225;DP=4629;DP4=2012,2075,15,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.25376e-16;MQSB=0.57363;RPB=0.76465;SGB=26.127;VDB=0.380865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN1356-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1442-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN1442-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1670-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN1670-S SNP G -> A AC=1;AN=188;BQB=0.710335;DP=1462;DP4=734,672,2,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000434587;MQSB=0.205424;RPB=0.180227;SGB=30.8063;VDB=0.299782;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN3343-S SNP G -> A AC=1;AN=184;BQB=0.446939;DP=3486;DP4=1739,1626,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.85597e-07;MQSB=0.81477;RPB=0.629377;SGB=42.7914;VDB=0.0434006;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN3698-S SNP G -> A AC=2;AN=190;BQB=0.895574;DP=2020;DP4=955,965,5,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.22231e-12;MQSB=0.167848;RPB=0.750895;SGB=85.5263;VDB=0.299512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3862-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN3862-S SNP G -> A AC=1;AN=158;BQB=0.557442;DP=2291;DP4=1138,1046,5,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.40677e-07;MQSB=0.28279;RPB=0.981218;SGB=44.1818;VDB=0.631268;EFF=INTERGENIC(MODIFIER||||||||||1) FN3997-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN3997-S SNP G -> A AC=2;AN=168;BQB=0.820323;DP=2354;DP4=1079,1141,16,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.8249e-15;MQSB=0.901356;RPB=0.902297;SGB=82.7794;VDB=0.53789;EFF=INTERGENIC(MODIFIER||||||||||1) FN467-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN467-S Single Base Substitution G-A INTERGENIC HOMO SNo: 466, Mutant_ID: FN467-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN871-S.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN871-S Single Base Substitution G-A INTERGENIC HOMO SNo: 777, Mutant_ID: FN871-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN_N1-213-1.SNP.12:9957165 chr12:009957165 0 W/9957165-9957165 FN_N1-213-1 Single Base Substitution G-A Homo SNo: 1391, Mutant_ID: FN_N1-213-1, Generation: M3, Mutations: 66, Genes: 12, Seed availability: Yes. FN2702-S.SNP.12:9961778 chr12:009961778 0 W/9961778-9961778 FN2702-S SNP C -> T AC=1;AN=200;BQB=0.621425;DP=4640;DP4=2214,2203,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.0236e-06;MQSB=0.933852;RPB=0.185813;SGB=35.8441;VDB=0.0169122;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.12:9962031 chr12:009962031 0 W/9962031-9962031 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.996419;DP=3379;DP4=1715,1606,16,18;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0032554;MQB=1.18367e-12;MQSB=5.37714e-07;RPB=0.638606;SGB=-8.47945;VDB=0.391557;EFF=INTERGENIC(MODIFIER||||||||||1) FN2136-S.SNP.12:9962038 chr12:009962038 0 W/9962038-9962038 FN2136-S SNP C -> G AC=1;AN=168;BQB=0.870472;DP=3384;DP4=1710,1628,12,17;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.00325059;MQB=2.64455e-15;MQSB=2.86603e-06;RPB=0.455365;SGB=56.2162;VDB=0.0777572;EFF=INTERGENIC(MODIFIER||||||||||1) FN736-S.SNP.12:9965154 chr12:009965154 0 W/9965154-9965154 FN736-S Single Base Substitution A-T INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN736-S.SNP.12:9965185 chr12:009965185 0 W/9965185-9965185 FN736-S Single Base Substitution C-T INTERGENIC HOMO SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2612-S.SNP.12:9980497 chr12:009980497 0 W/9980497-9980497 FN2612-S SNP T -> C AC=2;AN=186;BQB=0.732657;DP=3984;DP4=1818,2002,20,21;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=4.65438e-25;MQSB=0.555162;RPB=0.905098;SGB=137.217;VDB=0.123533;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.12:9988447 chr12:009988447 0 W/9988447-9988447 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.973278;DP=2263;DP4=1029,1189,8,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000883783;MQB=6.13465e-09;MQSB=0.109898;RPB=0.864976;SGB=10.1681;VDB=0.107346;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.12:9988880 chr12:009988880 0 W/9988880-9988880 FN473-S Single Base Substitution A-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN-199.SNP.12:9990267 chr12:009990267 0 W/9990267-9990267 FN-199 Single Base Substitution T-C INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2083-S.SNP.12:9993112 chr12:009993112 0 W/9993112-9993112 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.688123;DP=4330;DP4=1940,2110,56,178;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0258661;MQB=0;MQSB=2.60869e-07;RPB=0.255517;SGB=-2879.8;VDB=1.00467e-18;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G76E|479|LOC_Os12g17424|protein_coding|CODING|LOC_Os12g17424.1|1|1) FN-227.SNP.12:9994886 chr12:009994886 0 W/9994886-9994886 FN-227 Single Base Substitution A-G INTERGENIC HOMO SNo: 226, Mutant_ID: FN-227, Generation: M2, Mutations: 49, Genes: 25, Seed availability: Yes. FN3438-S.SNP.12:9999117 chr12:009999117 0 W/9999117-9999117 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.555029;DP=3425;DP4=1378,1942,15,29;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.43885e-27;MQSB=0.984156;RPB=0.925044;SGB=193.44;VDB=0.216297;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T106|111|LOC_Os12g17440|protein_coding|CODING|LOC_Os12g17440.1|1|1) FN1236-S.SNP.12:10003925 chr12:010003925 0 W/10003925-10003925 FN1236-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os12g17460 retrotransposon protein, putative, unclassified, expressed SNo: 1060, Mutant_ID: FN1236-S, Generation: M2, Mutations: 66, Genes: 114, Seed availability: Yes. FN3319-S.SNP.12:10005391 chr12:010005391 0 W/10005391-10005391 FN3319-S SNP A -> T AC=1;AN=184;BQB=0.90937;DP=3900;DP4=1989,1695,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27868e-08;MQSB=0.99999;RPB=0.99196;SGB=71.3514;VDB=0.753378;EFF=INTERGENIC(MODIFIER||||||||||1) FN-110.SNP.12:10006044 chr12:010006044 0 W/10006044-10006044 FN-110 Single Base Substitution G-A INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN2584-S.SNP.12:10006557 chr12:010006557 0 W/10006557-10006557 FN2584-S SNP G -> T AC=1;AN=186;BQB=0.617356;DP=3436;DP4=1772,1424,16,18;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=3.73067e-18;MQSB=0.634682;RPB=0.967129;SGB=73.4614;VDB=0.329683;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggA|G446|579|LOC_Os12g17470|protein_coding|CODING|LOC_Os12g17470.1|4|1) FN2173-S.SNP.12:10008397 chr12:010008397 0 W/10008397-10008397 FN2173-S SNP G -> A AC=2;AN=168;BQB=0.99756;DP=2238;DP4=957,1221,14,12;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.2605e-15;MQSB=0.993902;RPB=0.119054;SGB=109.773;VDB=0.497837;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R159C|579|LOC_Os12g17470|protein_coding|CODING|LOC_Os12g17470.1|1|1) FN413-S.SNP.12:10009923 chr12:010009923 0 W/10009923-10009923 FN413-S Single Base Substitution T-C INTERGENIC HET SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3480-S.SNP.12:10011508 chr12:010011508 0 W/10011508-10011508 FN3480-S SNP C -> G AC=2;AN=184;BQB=0.742119;DP=2455;DP4=1132,1256,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.16816e-13;MQSB=0.898408;RPB=0.422994;SGB=78.0093;VDB=0.0980489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaC|E605D|901|LOC_Os12g17480|protein_coding|CODING|LOC_Os12g17480.1|2|1) FN2608-S.SNP.12:10022136 chr12:010022136 0 W/10022136-10022136 FN2608-S SNP C -> T AC=1;AN=186;BQB=0.309893;DP=4004;DP4=1660,2092,9,14;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.64553e-10;MQSB=0.342258;RPB=0.319766;SGB=-37.8551;VDB=0.990542;EFF=INTRON(MODIFIER||||137|LOC_Os12g17500|protein_coding|CODING|LOC_Os12g17500.1|1|1) FN3536-S.SNP.12:10024767 chr12:010024767 0 W/10024767-10024767 FN3536-S SNP G -> A AC=1;AN=188;BQB=0.237154;DP=4456;DP4=2071,2289,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=37;MQ0F=0.109066;MQB=0.967965;MQSB=0;RPB=0.0260858;SGB=71.6954;VDB=0.222611;EFF=INTERGENIC(MODIFIER||||||||||1) FN2561-S.SNP.12:10028419 chr12:010028419 0 W/10028419-10028419 FN2561-S SNP C -> A AC=2;AN=198;BQB=0.633558;DP=3407;DP4=1468,1782,8,18;HOB=0.019998;ICB=0.495001;MQ=34;MQ0F=0.0918697;MQB=0.0166787;MQSB=3.46866e-30;RPB=0.889202;SGB=-39.0698;VDB=0.00423989;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T229|1807|LOC_Os12g17510|protein_coding|CODING|LOC_Os12g17510.1|1|1) FN1297-S.SNP.12:10034894 chr12:010034894 0 W/10034894-10034894 FN1297-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN369-S.SNP.12:10034894 chr12:010034894 0 W/10034894-10034894 FN369-S Single Base Substitution G-T INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3806-S.SNP.12:10034894 chr12:010034894 0 W/10034894-10034894 FN3806-S SNP G -> T AC=1;AN=190;BQB=0.992734;DP=3353;DP4=1320,1828,12,14;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.0730689;MQB=0.0459306;MQSB=5.69132e-23;RPB=0.823292;SGB=82.301;VDB=0.280344;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.12:10034894 chr12:010034894 0 W/10034894-10034894 FN3955-S SNP G -> T AC=1;AN=168;BQB=0.22806;DP=2757;DP4=1054,1525,4,10;HOB=7.08617e-05;ICB=0.000142567;MQ=29;MQ0F=0.0729053;MQB=0.891416;MQSB=3.77245e-12;RPB=0.125534;SGB=38.1788;VDB=0.308651;EFF=INTERGENIC(MODIFIER||||||||||1) FN908-S.SNP.12:10034894 chr12:010034894 0 W/10034894-10034894 FN908-S Single Base Substitution G-T INTERGENIC HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1307-S.SNP.12:10040960 chr12:010040960 0 W/10040960-10040960 FN1307-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN2124-S.SNP.12:10043662 chr12:010043662 0 W/10043662-10043662 FN2124-S SNP G -> T AC=1;AN=168;BQB=0.124238;DP=4558;DP4=2426,2081,19,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00131637;MQB=3.16427e-10;MQSB=2.16031e-05;RPB=0.886805;SGB=-10.2027;VDB=0.426105;EFF=INTRON(MODIFIER||||243|LOC_Os12g17520|protein_coding|CODING|LOC_Os12g17520.1|1|1) FN2665-S.SNP.12:10047192 chr12:010047192 0 W/10047192-10047192 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.791403;DP=4809;DP4=2072,2490,17,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.06519e-18;MQSB=0.935057;RPB=0.606334;SGB=127.947;VDB=0.201595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3524-S.SNP.12:10071189 chr12:010071189 0 W/10071189-10071189 FN3524-S SNP G -> T AC=1;AN=188;BQB=0.560608;DP=3460;DP4=1478,1814,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.18628e-06;MQSB=0.984282;RPB=0.601971;SGB=50.1574;VDB=0.81643;EFF=INTRON(MODIFIER||||423|LOC_Os12g17570|protein_coding|CODING|LOC_Os12g17570.1|1|1) FN3968-S.SNP.12:10076294 chr12:010076294 0 W/10076294-10076294 FN3968-S SNP C -> T AC=1;AN=168;BQB=0.942611;DP=2535;DP4=1178,1145,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.37789e-08;MQSB=0.825956;RPB=0.893872;SGB=41.6096;VDB=0.736614;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.12:10079366 chr12:010079366 0 W/10079366-10079366 FN3358-S SNP C -> T AC=2;AN=184;BQB=0.697189;DP=3441;DP4=1747,1573,18,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.51046e-24;MQSB=0.999815;RPB=0.686332;SGB=175.352;VDB=0.0712988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R169Q|320|LOC_Os12g17590|protein_coding|CODING|LOC_Os12g17590.1|2|1) FN488-S.SNP.12:10082461 chr12:010082461 0 W/10082461-10082461 FN488-S Single Base Substitution T-A INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN1156-XA21.SNP.12:10086983 chr12:010086983 0 W/10086983-10086983 FN1156-XA21 Single Base Substitution G-A INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN3764-S.SNP.12:10087286 chr12:010087286 0 W/10087286-10087286 FN3764-S SNP G -> A AC=1;AN=190;BQB=0.825009;DP=2701;DP4=1196,1414,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000370233;MQB=0.00168805;MQSB=0.154238;RPB=0.414614;SGB=62.7569;VDB=0.711884;EFF=INTERGENIC(MODIFIER||||||||||1) FN2649-S.SNP.12:10092256 chr12:010092256 0 W/10092256-10092256 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.984757;DP=4590;DP4=2095,2216,12,11;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00043573;MQB=0.000119683;MQSB=0.173752;RPB=0.375299;SGB=100.316;VDB=0.236252;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D239N|1123|LOC_Os12g17620|protein_coding|CODING|LOC_Os12g17620.1|2|1) FN1565-S.SNP.12:10092483 chr12:010092483 0 W/10092483-10092483 FN1565-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g17620 retrotransposon protein, putative, unclassified, expressed SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN2230-S.SNP.12:10095847 chr12:010095847 0 W/10095847-10095847 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.476393;DP=1801;DP4=949,298,18,0;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0116602;MQB=0.628336;MQSB=0;RPB=0.000874567;SGB=-126.519;VDB=0.0115737;EFF=INTERGENIC(MODIFIER||||||||||1) FN3661-S.SNP.12:10096711 chr12:010096711 0 W/10096711-10096711 FN3661-S SNP C -> T AC=1;AN=190;BQB=0.829224;DP=2691;DP4=1389,1201,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.11557;MQB=0.88676;MQSB=7.43357e-19;RPB=0.960357;SGB=58.2031;VDB=0.871028;EFF=INTERGENIC(MODIFIER||||||||||1) FN984-S.SNP.12:10100181 chr12:010100181 0 W/10100181-10100181 FN984-S Single Base Substitution G-C INTRON HET SNo: 888, Mutant_ID: FN984-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3309-S.SNP.12:10101278 chr12:010101278 0 W/10101278-10101278 FN3309-S SNP G -> T AC=1;AN=184;BQB=0.956029;DP=2691;DP4=1186,1402,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.156819;MQB=0.651796;MQSB=1.74754e-08;RPB=0.762732;SGB=25.1826;VDB=0.337328;EFF=INTERGENIC(MODIFIER||||||||||1) FN2650-S.SNP.12:10103382 chr12:010103382 0 W/10103382-10103382 FN2650-S SNP C -> T AC=1;AN=200;BQB=0.997441;DP=5258;DP4=2801,2133,22,16;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00323317;MQB=1.32264e-11;MQSB=2.02037e-23;RPB=0.757761;SGB=169.394;VDB=0.415144;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.12:10103671 chr12:010103671 0 W/10103671-10103671 FN2477 SNP C -> A AC=1;AN=200;BQB=0.164266;DP=5145;DP4=2509,2367,9,7;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0155491;MQB=0.00081913;MQSB=0.00230494;RPB=0.651786;SGB=-34.9207;VDB=0.460308;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P564|658|LOC_Os12g17640|protein_coding|CODING|LOC_Os12g17640.1|2|1) FN2242-S.SNP.12:10109022 chr12:010109022 0 W/10109022-10109022 FN2242-S SNP G -> A AC=2;AN=190;BQB=0.530699;DP=4801;DP4=2145,2404,13,17;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=2.98714e-17;MQSB=0.00378244;RPB=0.890932;SGB=96.5165;VDB=0.00379858;EFF=INTRON(MODIFIER||||196|LOC_Os12g17650|protein_coding|CODING|LOC_Os12g17650.1|2|1) FN3389-S.SNP.12:10109022 chr12:010109022 0 W/10109022-10109022 FN3389-S SNP G -> A AC=2;AN=184;BQB=0.967414;DP=3064;DP4=1363,1594,24,19;HOB=0.0215028;ICB=0.494625;MQ=46;MQ0F=0;MQB=2.39214e-23;MQSB=0.051443;RPB=0.389993;SGB=188.918;VDB=0.197167;EFF=INTRON(MODIFIER||||196|LOC_Os12g17650|protein_coding|CODING|LOC_Os12g17650.1|2|1) FN3530-S.SNP.12:10109022 chr12:010109022 0 W/10109022-10109022 FN3530-S SNP G -> A AC=1;AN=188;BQB=0.670603;DP=2814;DP4=1309,1442,9,11;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=1.10899e-08;MQSB=0.235998;RPB=0.982907;SGB=85.3253;VDB=0.737188;EFF=INTRON(MODIFIER||||196|LOC_Os12g17650|protein_coding|CODING|LOC_Os12g17650.1|2|1) FN3579-S.SNP.12:10111363 chr12:010111363 0 W/10111363-10111363 FN3579-S SNP C -> T AC=1;AN=188;BQB=0.897798;DP=3136;DP4=1716,1333,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.15133e-09;MQSB=0.798046;RPB=0.95737;SGB=39.5276;VDB=0.936957;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.12:10113735 chr12:010113735 0 W/10113735-10113735 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN941-S.SNP.12:10114273 chr12:010114273 0 W/10114273-10114273 FN941-S Single Base Substitution A-G INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. W598-2-1.SNP.12:10114623 chr12:010114623 0 W/10114623-10114623 W598-2-1 Single Base Substitution A-C INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN579-S.SNP.12:10119252 chr12:010119252 0 W/10119252-10119252 FN579-S Single Base Substitution G-C INTERGENIC HET SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN861-S.SNP.12:10120108 chr12:010120108 0 W/10120108-10120108 FN861-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g17670 expressed protein SNo: 767, Mutant_ID: FN861-S, Generation: M2, Mutations: 54, Genes: 31, Seed availability: Yes. FN4093-S.SNP.12:10120916 chr12:010120916 0 W/10120916-10120916 FN4093-S SNP G -> A AC=2;AN=182;BQB=0.889163;DP=2858;DP4=1362,1394,18,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.06341e-16;MQSB=0.998129;RPB=0.779755;SGB=29.3233;VDB=0.973791;EFF=INTRON(MODIFIER||||149|LOC_Os12g17670|protein_coding|CODING|LOC_Os12g17670.1|1|1) FN3425-S.SNP.12:10134894 chr12:010134894 0 W/10134894-10134894 FN3425-S SNP T -> A AC=1;AN=184;BQB=0.790724;DP=2750;DP4=1393,1233,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.02785e-05;MQSB=0.9057;RPB=0.507287;SGB=15.7097;VDB=0.519344;EFF=INTRON(MODIFIER||||730|LOC_Os12g17690|protein_coding|CODING|LOC_Os12g17690.1|4|1) FN2500.SNP.12:10139974 chr12:010139974 0 W/10139974-10139974 FN2500 SNP T -> A AC=1;AN=200;BQB=0.387594;DP=4423;DP4=1564,2557,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000226091;MQB=1.36445e-12;MQSB=0.361801;RPB=0.217155;SGB=86.5007;VDB=0.0318469;EFF=UTR_5_PRIME(MODIFIER||188||155|LOC_Os12g17700|protein_coding|CODING|LOC_Os12g17700.1|1|1) FN-281.SNP.12:10141008 chr12:010141008 0 W/10141008-10141008 FN-281 Single Base Substitution C-T INTERGENIC HET SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN819-S.SNP.12:10143754 chr12:010143754 0 W/10143754-10143754 FN819-S Single Base Substitution G-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN3806-S.SNP.12:10147240 chr12:010147240 0 W/10147240-10147240 FN3806-S SNP C -> G AC=2;AN=190;BQB=0.968145;DP=2669;DP4=1269,1282,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.73133e-17;MQSB=0.751974;RPB=0.452347;SGB=126.511;VDB=0.119686;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E250Q|447|LOC_Os12g17710|protein_coding|CODING|LOC_Os12g17710.1|1|1) FN671-S.SNP.12:10147438 chr12:010147438 0 W/10147438-10147438 FN671-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g17710 expressed protein SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1709-S.SNP.12:10148236 chr12:010148236 0 W/10148236-10148236 FN1709-S SNP A -> G AC=1;AN=188;BQB=0.0493408;DP=3703;DP4=1997,1667,19,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.10817e-09;MQSB=0.800013;RPB=0.999931;SGB=-72.0994;VDB=0.815103;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.12:10151235 chr12:010151235 0 W/10151235-10151235 FN2201-S SNP T -> A AC=1;AN=190;BQB=0.318324;DP=4566;DP4=1951,2239,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02585e-09;MQSB=0.446783;RPB=0.814507;SGB=28.7675;VDB=0.00720832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2348.SNP.12:10153838 chr12:010153838 0 W/10153838-10153838 FN2348 SNP A -> C AC=2;AN=192;BQB=0.478957;DP=5163;DP4=2664,2047,26,15;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.192717;MQB=0.995991;MQSB=0;RPB=0.966625;SGB=44.8992;VDB=0.00214707;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.12:10158061 chr12:010158061 0 W/10158061-10158061 FN1200-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g17740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1219-S.SNP.12:10158406 chr12:010158406 0 W/10158406-10158406 FN1219-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g17740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2668-S.SNP.12:10159353 chr12:010159353 0 W/10159353-10159353 FN2668-S SNP G -> A AC=1;AN=200;BQB=0.840617;DP=4630;DP4=2093,2261,13,21;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0149028;MQB=0.000823456;MQSB=2.53461e-05;RPB=0.954484;SGB=112.373;VDB=0.226335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D686N|1988|LOC_Os12g17740|protein_coding|CODING|LOC_Os12g17740.1|1|1) FN1463-S.SNP.12:10159735 chr12:010159735 0 W/10159735-10159735 FN1463-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g17740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2455.SNP.12:10161138 chr12:010161138 0 W/10161138-10161138 FN2455 SNP G -> T AC=1;AN=200;BQB=0.995842;DP=5526;DP4=2779,2453,14,4;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.162866;MQB=0.218579;MQSB=0.19189;RPB=0.0258439;SGB=32.0901;VDB=0.430391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D1240Y|1988|LOC_Os12g17740|protein_coding|CODING|LOC_Os12g17740.1|3|1) FN2302.SNP.12:10164068 chr12:010164068 0 W/10164068-10164068 FN2302 SNP T -> A AC=1;AN=192;BQB=0.561953;DP=7925;DP4=2786,4586,25,33;HOB=5.42535e-05;ICB=0.000109072;MQ=15;MQ0F=0.351293;MQB=0.00257198;MQSB=1.63205e-09;RPB=0.0441187;SGB=196.611;VDB=0.596637;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N700I|820|LOC_Os12g17750|protein_coding|CODING|LOC_Os12g17750.1|7|1) FN540-S.SNP.12:10167280 chr12:010167280 0 W/10167280-10167280 FN540-S Single Base Substitution T-C INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN2252-S.SNP.12:10171986 chr12:010171986 0 W/10171986-10171986 FN2252-S SNP C -> T AC=1;AN=190;BQB=0.974861;DP=4285;DP4=1969,1961,15,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.14504e-11;MQSB=0.773212;RPB=0.994749;SGB=71.6393;VDB=0.00687772;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.12:10173780 chr12:010173780 0 W/10173780-10173780 FN2608-S SNP C -> A AC=1;AN=198;BQB=0.994716;DP=3919;DP4=1735,1899,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.000510334;MQB=0.00958733;MQSB=9.52753e-07;RPB=0.885496;SGB=25.7687;VDB=0.366223;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.12:10175062 chr12:010175062 0 W/10175062-10175062 FN1251-S Single Base Substitution T-C INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3514-S.SNP.12:10176459 chr12:010176459 0 W/10176459-10176459 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.83196;DP=2631;DP4=1507,1055,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00266059;MQB=2.54617e-07;MQSB=0.998522;RPB=0.324318;SGB=32.441;VDB=0.107804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Tcg|P6S|250|LOC_Os12g17780|protein_coding|CODING|LOC_Os12g17780.1|1|1) FN1443-S.SNP.12:10179181 chr12:010179181 0 W/10179181-10179181 FN1443-S Single Base Substitution C-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN3856-S.SNP.12:10179501 chr12:010179501 0 W/10179501-10179501 FN3856-S SNP C -> T AC=1;AN=158;BQB=0.71394;DP=2257;DP4=1048,1123,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000994913;MQSB=0.822338;RPB=0.821975;SGB=33.9591;VDB=0.699372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.12:10180781 chr12:010180781 0 W/10180781-10180781 FN2676-S SNP A -> G AC=1;AN=200;BQB=0.651605;DP=5258;DP4=2702,2318,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.92487e-09;MQSB=0.994682;RPB=0.488892;SGB=40.2696;VDB=0.0280438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.12:10182418 chr12:010182418 0 W/10182418-10182418 FN2653-S SNP C -> T AC=1;AN=200;BQB=0.700227;DP=4941;DP4=2514,2170,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.78792e-15;MQSB=0.996211;RPB=0.405933;SGB=45.1159;VDB=0.174824;EFF=INTERGENIC(MODIFIER||||||||||1) FN2317.SNP.12:10191097 chr12:010191097 0 W/10191097-10191097 FN2317 SNP T -> G AC=1;AN=192;BQB=0.738801;DP=4794;DP4=2214,2365,5,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000208594;MQB=2.45311e-05;MQSB=0.717946;RPB=0.97328;SGB=30.9536;VDB=0.730564;EFF=INTRON(MODIFIER||||832|LOC_Os12g17800|protein_coding|CODING|LOC_Os12g17800.1|2|1) FN75-S-43.SNP.12:10203556 chr12:010203556 0 W/10203556-10203556 FN75-S-43 SNP T -> G AC=1;AN=190;BQB=0.737196;DP=4277;DP4=2373,1510,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.03947e-09;MQSB=0.253792;RPB=0.554639;SGB=75.1932;VDB=0.722392;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.12:10209312 chr12:010209312 0 W/10209312-10209312 FN-344 Single Base Substitution G-T INTRON HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3546-S.SNP.12:10215000 chr12:010215000 0 W/10215000-10215000 FN3546-S SNP G -> A AC=1;AN=188;BQB=0.999836;DP=2479;DP4=1232,1175,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.24493e-08;MQSB=0.994375;RPB=0.036747;SGB=35.9843;VDB=0.0746178;EFF=INTERGENIC(MODIFIER||||||||||1) FN1402-S.SNP.12:10225568 chr12:010225568 0 W/10225568-10225568 FN1402-S Single Base Substitution C-T INTERGENIC HET SNo: 1181, Mutant_ID: FN1402-S, Generation: M2, Mutations: 83, Genes: 115, Seed availability: Yes. FN2658-S.SNP.12:10225740 chr12:010225740 0 W/10225740-10225740 FN2658-S SNP T -> G AC=1;AN=200;BQB=0.655538;DP=5193;DP4=2558,2422,12,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.55762e-12;MQSB=0.985113;RPB=0.9803;SGB=32.0901;VDB=0.608571;EFF=INTERGENIC(MODIFIER||||||||||1) FN1333-S.SNP.12:10229918 chr12:010229918 0 W/10229918-10229918 FN1333-S Single Base Substitution A-T INTERGENIC HET SNo: 1134, Mutant_ID: FN1333-S, Generation: M2, Mutations: 79, Genes: 47, Seed availability: Yes. FN1012-S.SNP.12:10237543 chr12:010237543 0 W/10237543-10237543 FN1012-S Single Base Substitution A-G INTRON HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3456-S.SNP.12:10246529 chr12:010246529 0 W/10246529-10246529 FN3456-S SNP A -> T AC=1;AN=184;BQB=0.956518;DP=2685;DP4=1286,1338,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.99721e-05;MQSB=0.926605;RPB=0.851885;SGB=26.1347;VDB=0.814142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2207-S.SNP.12:10250750 chr12:010250750 0 W/10250750-10250750 FN2207-S SNP G -> A AC=2;AN=190;BQB=0.901317;DP=5470;DP4=2621,2434,26,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.35393e-21;MQSB=0.911098;RPB=0.992531;SGB=1.7327;VDB=0.348968;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.12:10251946 chr12:010251946 0 W/10251946-10251946 FN2795-S SNP G -> T AC=1;AN=198;BQB=0.476171;DP=4091;DP4=1781,2093,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.44239e-07;MQSB=0.907134;RPB=0.759022;SGB=-13.2407;VDB=0.906104;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.12:10256042 chr12:010256042 0 W/10256042-10256042 FN2532-S SNP A -> G AC=1;AN=198;BQB=0.948117;DP=4422;DP4=1918,2314,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.07805e-16;MQSB=0.888185;RPB=0.72402;SGB=55.2955;VDB=0.084391;EFF=INTRON(MODIFIER||||843|LOC_Os12g17880|protein_coding|CODING|LOC_Os12g17880.1|3|1) FN-77.SNP.12:10258420 chr12:010258420 0 W/10258420-10258420 FN-77 Single Base Substitution C-T INTRON HOMO SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN1435-S.SNP.12:10258420 chr12:010258420 0 W/10258420-10258420 FN1435-S Single Base Substitution C-T INTRON HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN590-S.SNP.12:10258420 chr12:010258420 0 W/10258420-10258420 FN590-S Single Base Substitution C-T INTRON HOMO SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN1202-S.SNP.12:10270933 chr12:010270933 0 W/10270933-10270933 FN1202-S Single Base Substitution G-A INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-137.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN-137 Single Base Substitution G-T INTERGENIC HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-183.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN-183 Single Base Substitution G-T INTERGENIC HOMO SNo: 183, Mutant_ID: FN-183, Generation: M2, Mutations: 56, Genes: 83, Seed availability: Yes. FN-76.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN-76 Single Base Substitution G-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN1036-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN1036-S Single Base Substitution G-T INTERGENIC HOMO SNo: 932, Mutant_ID: FN1036-S, Generation: M2, Mutations: 61, Genes: 159, Seed availability: Yes. FN1338-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN1338-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1493-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN1493-S Single Base Substitution G-T INTERGENIC Homo SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2283.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN2283 SNP G -> T AC=2;AN=192;BQB=0.868469;DP=4682;DP4=2193,2124,42,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.07531e-30;MQSB=0.980148;RPB=0.840403;SGB=239.972;VDB=0.653734;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN2431 SNP G -> T AC=2;AN=200;BQB=0.650279;DP=4092;DP4=2096,1739,15,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.04631e-12;MQSB=0.934429;RPB=0.628109;SGB=104.921;VDB=0.0125571;EFF=INTERGENIC(MODIFIER||||||||||1) FN3449-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN3449-S SNP G -> T AC=2;AN=184;BQB=0.888224;DP=3022;DP4=1442,1483,16,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.06085e-11;MQSB=0.892054;RPB=0.827269;SGB=134.656;VDB=0.303435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN3834-S SNP G -> T AC=2;AN=190;BQB=0.823892;DP=2724;DP4=1351,1258,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.79066e-13;MQSB=0.96384;RPB=0.270958;SGB=92.9626;VDB=0.366193;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN692-S Single Base Substitution G-T INTERGENIC HOMO SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN811-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN811-S Single Base Substitution G-T INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN870-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN870-S Single Base Substitution G-T INTERGENIC HOMO SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN921-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN921-S Single Base Substitution G-T INTERGENIC HOMO SNo: 827, Mutant_ID: FN921-S, Generation: M2, Mutations: 68, Genes: 31, Seed availability: Yes. FN959-S.SNP.12:10271759 chr12:010271759 0 W/10271759-10271759 FN959-S Single Base Substitution G-T INTERGENIC HOMO SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN1363-S.SNP.12:10273687 chr12:010273687 0 W/10273687-10273687 FN1363-S Single Base Substitution G-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN1363-S.SNP.12:10273688 chr12:010273688 0 W/10273688-10273688 FN1363-S Single Base Substitution C-T INTERGENIC HET SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN-93.SNP.12:10273956 chr12:010273956 0 W/10273956-10273956 FN-93 Single Base Substitution A-G INTERGENIC HOMO SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN3566-S.SNP.12:10274090 chr12:010274090 0 W/10274090-10274090 FN3566-S SNP A -> G AC=1;AN=188;BQB=0.952129;DP=2803;DP4=1259,1461,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.15096e-06;MQSB=0.988604;RPB=0.982952;SGB=44.4357;VDB=0.886009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3767-S.SNP.12:10301005 chr12:010301005 0 W/10301005-10301005 FN3767-S SNP T -> C AC=2;AN=190;BQB=0.974454;DP=2034;DP4=1178,734,10,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.74438e-09;MQSB=0.490629;RPB=0.756417;SGB=46.7622;VDB=0.880557;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.12:10304435 chr12:010304435 0 W/10304435-10304435 FN627-S Single Base Substitution C-G INTRON HET SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN811-S.SNP.12:10312096 chr12:010312096 0 W/10312096-10312096 FN811-S Single Base Substitution G-A INTERGENIC HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN460-S.SNP.12:10314515 chr12:010314515 0 W/10314515-10314515 FN460-S Single Base Substitution C-A INTERGENIC HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2498.SNP.12:10317222 chr12:010317222 0 W/10317222-10317222 FN2498 SNP T -> C AC=1;AN=200;BQB=0.706833;DP=5948;DP4=3188,2407,11,13;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.19889;MQB=0.473896;MQSB=0;RPB=0.999871;SGB=104.921;VDB=0.577828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3280-S.SNP.12:10317340 chr12:010317340 0 W/10317340-10317340 FN3280-S SNP G -> T AC=1;AN=184;BQB=0.787679;DP=3862;DP4=1670,2077,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.280166;MQB=0.0535291;MQSB=4.43013e-06;RPB=0.990841;SGB=42.7914;VDB=0.893321;EFF=INTERGENIC(MODIFIER||||||||||1) FN418-S.SNP.12:10317784 chr12:010317784 0 W/10317784-10317784 FN418-S Single Base Substitution C-T INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN1527-S.SNP.12:10322774 chr12:010322774 0 W/10322774-10322774 FN1527-S Single Base Substitution G-T INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN4049-S.SNP.12:10323357 chr12:010323357 0 W/10323357-10323357 FN4049-S SNP T -> C AC=2;AN=168;BQB=0.603176;DP=3350;DP4=1663,1523,18,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.71207e-19;MQSB=0.996459;RPB=0.489643;SGB=127.38;VDB=0.44293;EFF=INTERGENIC(MODIFIER||||||||||1) FN2113-S.SNP.12:10325554 chr12:010325554 0 W/10325554-10325554 FN2113-S SNP C -> T AC=1;AN=168;BQB=0.837587;DP=2718;DP4=1039,1629,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=38;MQ0F=0.0750552;MQB=0.521732;MQSB=1.9183e-38;RPB=0.973739;SGB=-13.6493;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN3457-S.SNP.12:10326704 chr12:010326704 0 W/10326704-10326704 FN3457-S SNP C -> T AC=1;AN=184;BQB=0.873101;DP=2941;DP4=1603,1240,13,1;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00544033;MQB=6.24391e-05;MQSB=0.532386;RPB=0.157271;SGB=39.2697;VDB=0.146497;EFF=INTERGENIC(MODIFIER||||||||||1) FN1136-19-S.SNP.12:10326775 chr12:010326775 0 W/10326775-10326775 FN1136-19-S Single Base Substitution C-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN3541-S.SNP.12:10329996 chr12:010329996 0 W/10329996-10329996 FN3541-S SNP C -> T AC=1;AN=188;BQB=0.99663;DP=3043;DP4=1569,1415,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.000657246;MQB=9.89757e-08;MQSB=0.817037;RPB=0.0683532;SGB=20.9896;VDB=0.27967;EFF=INTRON(MODIFIER||||676|LOC_Os12g17980|protein_coding|CODING|LOC_Os12g17980.1|1|1) FN2531-S.SNP.12:10333541 chr12:010333541 0 W/10333541-10333541 FN2531-S SNP C -> A AC=1;AN=188;BQB=0.680934;DP=3615;DP4=1734,1673,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.68504e-06;MQSB=0.94109;RPB=0.326933;SGB=35.7638;VDB=0.300287;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V27|201|LOC_Os12g17990|protein_coding|CODING|LOC_Os12g17990.1|1|1) FN1339-S.SNP.12:10336243 chr12:010336243 0 W/10336243-10336243 FN1339-S Single Base Substitution G-C INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2664-S.SNP.12:10341670 chr12:010341670 0 W/10341670-10341670 FN2664-S SNP G -> A AC=2;AN=200;BQB=0.0766522;DP=4326;DP4=2088,2014,37,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.64711e-34;MQSB=0.900108;RPB=0.248678;SGB=270.708;VDB=0.843931;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.12:10343485 chr12:010343485 0 W/10343485-10343485 FN2602-S SNP T -> G AC=1;AN=198;BQB=0.614424;DP=4134;DP4=2106,1838,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.02748e-09;MQSB=0.709833;RPB=0.380136;SGB=54.5295;VDB=0.369619;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.12:10345270 chr12:010345270 0 W/10345270-10345270 FN714-S Single Base Substitution G-A INTERGENIC HET SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN-151.SNP.12:10346588 chr12:010346588 0 W/10346588-10346588 FN-151 Single Base Substitution A-T INTERGENIC HET SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1230-S.SNP.12:10356602 chr12:010356602 0 W/10356602-10356602 FN1230-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. FN1757-S.SNP.12:10356924 chr12:010356924 0 W/10356924-10356924 FN1757-S SNP T -> A AC=1;AN=188;BQB=0.776644;DP=2546;DP4=1592,904,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.00196386;MQB=0.127368;MQSB=0;RPB=0.81923;SGB=-11.74;VDB=0.0745614;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D73V|1391|LOC_Os12g18010|protein_coding|CODING|LOC_Os12g18010.1|2|1) FN1757-S.SNP.12:10356925 chr12:010356925 0 W/10356925-10356925 FN1757-S SNP C -> A AC=1;AN=188;BQB=0.917105;DP=2544;DP4=1593,911,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=32;MQ0F=0.00157233;MQB=0.0581685;MQSB=0;RPB=0.61168;SGB=57.244;VDB=0.0970426;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D73Y|1391|LOC_Os12g18010|protein_coding|CODING|LOC_Os12g18010.1|2|1) FN2203-S.SNP.12:10356943 chr12:010356943 0 W/10356943-10356943 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.471702;DP=5009;DP4=2313,2404,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00359353;MQB=0.00832315;MQSB=1.38825e-10;RPB=0.815256;SGB=49.0954;VDB=0.619634;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E67K|1391|LOC_Os12g18010|protein_coding|CODING|LOC_Os12g18010.1|2|1) FN2322.SNP.12:10360658 chr12:010360658 0 W/10360658-10360658 FN2322 SNP C -> T AC=1;AN=192;BQB=0.85408;DP=4850;DP4=2151,2426,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.0043299;MQB=2.31954e-08;MQSB=0.51176;RPB=0.614821;SGB=31.4783;VDB=0.244289;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G935E|1003|LOC_Os12g18020|protein_coding|CODING|LOC_Os12g18020.1|3|1) FN2322.SNP.12:10360659 chr12:010360659 0 W/10360659-10360659 FN2322 SNP C -> T AC=1;AN=192;BQB=0.927729;DP=4870;DP4=2170,2452,6,11;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00431211;MQB=7.197e-09;MQSB=0.635712;RPB=0.423454;SGB=50.4731;VDB=0.104747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G935R|1003|LOC_Os12g18020|protein_coding|CODING|LOC_Os12g18020.1|3|1) FN-150.SNP.12:10362017 chr12:010362017 0 W/10362017-10362017 FN-150 Single Base Substitution A-C INTRON HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3889-S.SNP.12:10363930 chr12:010363930 0 W/10363930-10363930 FN3889-S SNP T -> C AC=1;AN=158;BQB=0.628368;DP=2301;DP4=958,1265,4,5;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00260756;MQB=0.000742101;MQSB=0.106101;RPB=0.869595;SGB=33.9591;VDB=0.99745;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.12:10365767 chr12:010365767 0 W/10365767-10365767 FN_786-4-1 Single Base Substitution C-A HET SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN2612-S.SNP.12:10382004 chr12:010382004 0 W/10382004-10382004 FN2612-S SNP G -> T AC=2;AN=190;BQB=0.474516;DP=2594;DP4=1459,913,14,13;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.0185042;MQB=0.181532;MQSB=0.532443;RPB=0.635224;SGB=86.8856;VDB=0.141107;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.12:10382005 chr12:010382005 0 W/10382005-10382005 FN2612-S SNP C -> T AC=2;AN=188;BQB=0.925612;DP=2596;DP4=1367,818,18,12;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.0146379;MQB=0.0417739;MQSB=0.890911;RPB=0.445967;SGB=-6.09922;VDB=0.0919891;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.12:10382950 chr12:010382950 0 W/10382950-10382950 FN3360-S SNP G -> T AC=1;AN=184;BQB=0.978474;DP=3907;DP4=2087,1681,10,17;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.141029;MQB=0.576241;MQSB=0;RPB=0.99946;SGB=85.0529;VDB=0.322809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P1034T|1233|LOC_Os12g18060|protein_coding|CODING|LOC_Os12g18060.1|2|1) FN2173-S.SNP.12:10386545 chr12:010386545 0 W/10386545-10386545 FN2173-S SNP A -> G AC=2;AN=168;BQB=0.208307;DP=3473;DP4=2031,1383,14,20;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0120933;MQB=1.0702e-05;MQSB=1.13519e-41;RPB=0.994475;SGB=-123.754;VDB=0.29285;EFF=INTERGENIC(MODIFIER||||||||||1) FN-363.SNP.12:10395033 chr12:010395033 0 W/10395033-10395033 FN-363 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g18080 retrotransposon protein, putative, unclassified, expressed SNo: 352, Mutant_ID: FN-363, Generation: M2, Mutations: 67, Genes: 158, Seed availability: Yes. FN2153-S.SNP.12:10397866 chr12:010397866 0 W/10397866-10397866 FN2153-S SNP G -> A AC=1;AN=168;BQB=0.193953;DP=4154;DP4=1807,2307,15,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.02864e-13;MQSB=0.969036;RPB=0.113132;SGB=-113.477;VDB=0.490222;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.12:10398967 chr12:010398967 0 W/10398967-10398967 FN2261-S SNP A -> G AC=2;AN=190;BQB=0.671399;DP=4847;DP4=2222,2281,54,47;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=5.35702e-34;MQSB=0.386515;RPB=0.758614;SGB=448.844;VDB=0.456099;EFF=INTERGENIC(MODIFIER||||||||||1) FN1916.SNP.12:10401876 chr12:010401876 0 W/10401876-10401876 FN1916 Single Base Substitution C-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1916.SNP.12:10401877 chr12:010401877 0 W/10401877-10401877 FN1916 Single Base Substitution C-A Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1916.SNP.12:10401878 chr12:010401878 0 W/10401878-10401878 FN1916 Single Base Substitution C-T Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN3957-S.SNP.12:10402300 chr12:010402300 0 W/10402300-10402300 FN3957-S SNP G -> A AC=2;AN=168;BQB=0.997408;DP=2048;DP4=935,991,10,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.76389e-09;MQSB=0.219485;RPB=0.600194;SGB=31.908;VDB=0.665106;EFF=INTRON(MODIFIER||||392|LOC_Os12g18090|protein_coding|CODING|LOC_Os12g18090.1|1|1) FN2084-S.SNP.12:10403393 chr12:010403393 0 W/10403393-10403393 FN2084-S SNP C -> A AC=1;AN=168;BQB=0.888617;DP=3076;DP4=1462,1589,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=1.16122e-06;MQSB=0.423652;RPB=0.998386;SGB=5.62151;VDB=0.746364;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.12:10411372 chr12:010411372 0 W/10411372-10411372 FN505-S Single Base Substitution G-T INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN3355-S.SNP.12:10412494 chr12:010412494 0 W/10412494-10412494 FN3355-S SNP C -> T AC=2;AN=184;BQB=0.969566;DP=3836;DP4=1644,2042,26,22;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000521376;MQB=2.36425e-23;MQSB=0.559068;RPB=0.962634;SGB=211.527;VDB=0.355027;EFF=INTERGENIC(MODIFIER||||||||||1) FN-250.SNP.12:10412938 chr12:010412938 0 W/10412938-10412938 FN-250 Single Base Substitution C-A INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN3516-S.SNP.12:10412938 chr12:010412938 0 W/10412938-10412938 FN3516-S SNP C -> A AC=1;AN=188;BQB=0.981167;DP=3721;DP4=1804,1736,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.21237e-07;MQSB=0.510315;RPB=0.995127;SGB=67.1521;VDB=0.712842;EFF=INTERGENIC(MODIFIER||||||||||1) W472-5-1.SNP.12:10420240 chr12:010420240 0 W/10420240-10420240 W472-5-1 Single Base Substitution C-A INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN2556-S.SNP.12:10438821 chr12:010438821 0 W/10438821-10438821 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.573117;DP=4173;DP4=1970,1982,5,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.52009e-06;MQSB=0.981011;RPB=0.891321;SGB=72.5245;VDB=0.848082;EFF=INTRON(MODIFIER||||529|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.1|7|1),INTRON(MODIFIER||||528|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.2|7|1),INTRON(MODIFIER||||488|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.4|7|1) FN3293-S.SNP.12:10439918 chr12:010439918 0 W/10439918-10439918 FN3293-S SNP G -> A AC=2;AN=184;BQB=0.973914;DP=2432;DP4=1141,1219,9,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.07372e-15;MQSB=0.98417;RPB=0.914512;SGB=107.526;VDB=0.0316951;EFF=INTRON(MODIFIER||||529|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.1|6|1),INTRON(MODIFIER||||528|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.2|6|1),INTRON(MODIFIER||||488|LOC_Os12g18120|protein_coding|CODING|LOC_Os12g18120.4|6|1) FN3607-S.SNP.12:10449721 chr12:010449721 0 W/10449721-10449721 FN3607-S SNP G -> T AC=1;AN=190;BQB=0.478947;DP=2835;DP4=1307,1436,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.52974e-07;MQSB=0.883466;RPB=0.950798;SGB=28.7675;VDB=0.246622;EFF=INTERGENIC(MODIFIER||||||||||1) FN573-S.SNP.12:10458894 chr12:010458894 0 W/10458894-10458894 FN573-S Single Base Substitution G-A INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3371-S.SNP.12:10465801 chr12:010465801 0 W/10465801-10465801 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.959761;DP=2599;DP4=1257,1260,11,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000384763;MQB=1.90711e-09;MQSB=0.999954;RPB=0.933828;SGB=57.786;VDB=0.199423;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S747T|776|LOC_Os12g18140|protein_coding|CODING|LOC_Os12g18140.1|14|1) FN3371-S.SNP.12:10465802 chr12:010465802 0 W/10465802-10465802 FN3371-S SNP C -> T AC=1;AN=184;BQB=0.961374;DP=2598;DP4=1274,1246,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.04536e-09;MQSB=0.996019;RPB=0.878591;SGB=25.7969;VDB=0.405132;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S747F|776|LOC_Os12g18140|protein_coding|CODING|LOC_Os12g18140.1|14|1) FN2588-S.SNP.12:10474770 chr12:010474770 0 W/10474770-10474770 FN2588-S SNP A -> C AC=1;AN=198;BQB=0.991918;DP=4169;DP4=1953,1968,18,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.52301e-16;MQSB=0.84432;RPB=0.696796;SGB=94.0758;VDB=0.308767;EFF=SPLICE_SITE_REGION(LOW||||1366|LOC_Os12g18150|protein_coding|CODING|LOC_Os12g18150.1|3|1),INTRON(MODIFIER||||1366|LOC_Os12g18150|protein_coding|CODING|LOC_Os12g18150.1|3|1) FN712-S.SNP.12:10491810 chr12:010491810 0 W/10491810-10491810 FN712-S Single Base Substitution A-G INTRON HET SNo: 641, Mutant_ID: FN712-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN4046-S.SNP.12:10494888 chr12:010494888 0 W/10494888-10494888 FN4046-S SNP G -> T AC=1;AN=168;BQB=0.999451;DP=1391;DP4=744,564,5,3;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0265996;MQB=0.610009;MQSB=0.000149183;RPB=0.446964;SGB=17.5943;VDB=0.244443;EFF=INTRON(MODIFIER||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|1|1) FN899-S.SNP.12:10496081 chr12:010496081 0 W/10496081-10496081 FN899-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g18190 retrotransposon protein, putative, unclassified, expressed SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN3933-S.SNP.12:10497316 chr12:010497316 0 W/10497316-10497316 FN3933-S SNP G -> A AC=1;AN=158;BQB=0.991257;DP=2317;DP4=1157,1085,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.01557e-09;MQSB=0.865361;RPB=0.526168;SGB=55.806;VDB=0.563024;EFF=SPLICE_SITE_REGION(LOW||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|2|1),INTRON(MODIFIER||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|2|1) FN2557-S.SNP.12:10499038 chr12:010499038 0 W/10499038-10499038 FN2557-S SNP C -> T AC=1;AN=198;BQB=0.886718;DP=4528;DP4=2187,2158,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=7.44339e-06;MQSB=0.961985;RPB=0.226204;SGB=43.7442;VDB=0.022033;EFF=INTRON(MODIFIER||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|5|1) FN811-S.SNP.12:10500007 chr12:010500007 0 W/10500007-10500007 FN811-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g18190 retrotransposon protein, putative, unclassified, expressed SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN3115-S.SNP.12:10500464 chr12:010500464 0 W/10500464-10500464 FN3115-S SNP C -> A AC=1;AN=184;BQB=0.972923;DP=3179;DP4=1400,1707,5,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.06396e-09;MQSB=0.987427;RPB=0.470074;SGB=71.3514;VDB=0.611754;EFF=INTRON(MODIFIER||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|7|1) FN569-S.SNP.12:10500783 chr12:010500783 0 W/10500783-10500783 FN569-S Single Base Substitution C-T INTRON HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN3416-S.SNP.12:10501476 chr12:010501476 0 W/10501476-10501476 FN3416-S SNP T -> C AC=1;AN=184;BQB=0.931451;DP=3162;DP4=1424,1628,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000241877;MQSB=0.855389;RPB=0.70161;SGB=18.1394;VDB=0.542761;EFF=INTRON(MODIFIER||||1011|LOC_Os12g18190|protein_coding|CODING|LOC_Os12g18190.1|8|1) FN678-S.SNP.12:10506735 chr12:010506735 0 W/10506735-10506735 FN678-S Single Base Substitution G-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN1667-S.SNP.12:10507509 chr12:010507509 0 W/10507509-10507509 FN1667-S SNP G -> A AC=1;AN=188;BQB=0.995019;DP=3827;DP4=1966,1821,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.69827e-12;MQSB=0.866296;RPB=0.906061;SGB=-64.8159;VDB=0.155754;EFF=INTRON(MODIFIER||||379|LOC_Os12g18200|protein_coding|CODING|LOC_Os12g18200.1|8|1) FN1667-S.SNP.12:10507518 chr12:010507518 0 W/10507518-10507518 FN1667-S SNP C -> A AC=1;AN=188;BQB=0.181379;DP=3791;DP4=1964,1791,14,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.58991e-07;MQSB=0.837977;RPB=0.988792;SGB=-121.349;VDB=0.197858;EFF=INTRON(MODIFIER||||379|LOC_Os12g18200|protein_coding|CODING|LOC_Os12g18200.1|8|1) FN-63.SNP.12:10518139 chr12:010518139 0 W/10518139-10518139 FN-63 Single Base Substitution A-G INTERGENIC HET SNo: 63, Mutant_ID: FN-63, Generation: M2, Mutations: 46, Genes: 40, Seed availability: Yes. FN2650-S.SNP.12:10519292 chr12:010519292 0 W/10519292-10519292 FN2650-S SNP G -> A AC=1;AN=200;BQB=0.947785;DP=4213;DP4=1899,1983,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.78184e-11;MQSB=0.988172;RPB=0.736513;SGB=15.9106;VDB=0.596617;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.12:10520260 chr12:010520260 0 W/10520260-10520260 FN950-S Single Base Substitution C-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN661-S.SNP.12:10521026 chr12:010521026 0 W/10521026-10521026 FN661-S Single Base Substitution C-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN695-S.SNP.12:10525984 chr12:010525984 0 W/10525984-10525984 FN695-S Single Base Substitution C-T INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN695-S.SNP.12:10525985 chr12:010525985 0 W/10525985-10525985 FN695-S Single Base Substitution T-A INTERGENIC HOMO SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN1016-S.SNP.12:10526235 chr12:010526235 0 W/10526235-10526235 FN1016-S Single Base Substitution C-T INTERGENIC HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN3449-S.SNP.12:10527597 chr12:010527597 0 W/10527597-10527597 FN3449-S SNP G -> A AC=2;AN=184;BQB=0.990138;DP=2420;DP4=1190,1145,17,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.47846e-16;MQSB=0.0278368;RPB=0.113729;SGB=134.656;VDB=0.766154;EFF=INTRON(MODIFIER||||167|LOC_Os12g18210|protein_coding|CODING|LOC_Os12g18210.1|1|1) FN898-S.SNP.12:10528057 chr12:010528057 0 W/10528057-10528057 FN898-S Single Base Substitution A-G INTRON HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN4134-S.SNP.12:10528786 chr12:010528786 0 W/10528786-10528786 FN4134-S SNP G -> A AC=1;AN=182;BQB=0.996994;DP=3107;DP4=1311,1707,5,18;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000321854;MQB=2.37934e-13;MQSB=0.969422;RPB=0.836033;SGB=15.7256;VDB=0.232316;EFF=INTRON(MODIFIER||||167|LOC_Os12g18210|protein_coding|CODING|LOC_Os12g18210.1|1|1) FN2731-S.SNP.12:10531371 chr12:010531371 0 W/10531371-10531371 FN2731-S SNP C -> A AC=1;AN=200;BQB=0.963698;DP=4518;DP4=2358,1885,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.1134e-16;MQSB=0.999005;RPB=0.238157;SGB=118.737;VDB=0.831751;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F119L|210|LOC_Os12g18220|protein_coding|CODING|LOC_Os12g18220.1|2|1) FN2366.SNP.12:10534440 chr12:010534440 0 W/10534440-10534440 FN2366 SNP C -> T AC=1;AN=192;BQB=0.9351;DP=4877;DP4=2095,2498,11,7;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.0106623;MQB=4.6103e-05;MQSB=6.78321e-09;RPB=0.970224;SGB=76.5965;VDB=0.94637;EFF=INTERGENIC(MODIFIER||||||||||1) FN730-S.SNP.12:10536652 chr12:010536652 0 W/10536652-10536652 FN730-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g18250 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 655, Mutant_ID: FN730-S, Generation: M2, Mutations: 63, Genes: 38, Seed availability: Yes. FN941-S.SNP.12:10547529 chr12:010547529 0 W/10547529-10547529 FN941-S Single Base Substitution G-A INTERGENIC HOMO SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN3835-S.SNP.12:10554130 chr12:010554130 0 W/10554130-10554130 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.969732;DP=3081;DP4=1595,1376,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0480364;MQB=0.15877;MQSB=0.137903;RPB=0.0674529;SGB=35.4339;VDB=0.135572;EFF=INTRON(MODIFIER||||322|LOC_Os12g18290|protein_coding|CODING|LOC_Os12g18290.1|1|1) FN502-S.SNP.12:10554689 chr12:010554689 0 W/10554689-10554689 FN502-S Single Base Substitution G-A INTERGENIC HET SNo: 500, Mutant_ID: FN502-S, Generation: M2, Mutations: 63, Genes: 48, Seed availability: Yes. FN2339.SNP.12:10555486 chr12:010555486 0 W/10555486-10555486 FN2339 SNP T -> A AC=1;AN=192;BQB=5.14353e-13;DP=4556;DP4=2097,1884,14,9;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0153644;MQB=0.00190231;MQSB=5.05508e-08;RPB=0.397844;SGB=-10.8182;VDB=0.00705199;EFF=INTERGENIC(MODIFIER||||||||||1) FN2118-S.SNP.12:10558190 chr12:010558190 0 W/10558190-10558190 FN2118-S SNP G -> T AC=1;AN=168;BQB=0.10425;DP=4013;DP4=1915,2063,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.44996e-06;MQSB=0.953502;RPB=0.951042;SGB=-63.3606;VDB=0.751689;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G216C|457|LOC_Os12g18300|protein_coding|CODING|LOC_Os12g18300.1|2|1) FN1556-S.SNP.12:10567518 chr12:010567518 0 W/10567518-10567518 FN1556-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1250-S.SNP.12:10568836 chr12:010568836 0 W/10568836-10568836 FN1250-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1068, Mutant_ID: FN1250-S, Generation: M2, Mutations: 61, Genes: 104, Seed availability: Yes. FN3968-S.SNP.12:10571227 chr12:010571227 0 W/10571227-10571227 FN3968-S SNP C -> T AC=1;AN=168;BQB=0.815646;DP=2484;DP4=1191,1159,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00232534;MQSB=0.514676;RPB=0.629712;SGB=34.4498;VDB=0.79551;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.12:10575284 chr12:010575284 0 W/10575284-10575284 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g18320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN430-S.SNP.12:10575289 chr12:010575289 0 W/10575289-10575289 FN430-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g18320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN3827-S.SNP.12:10576687 chr12:010576687 0 W/10576687-10576687 FN3827-S SNP G -> A AC=1;AN=190;BQB=0.354857;DP=2977;DP4=1587,1263,12,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000671817;MQB=1.39481e-07;MQSB=0.465275;RPB=0.817178;SGB=13.4344;VDB=0.0100276;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y535|1226|LOC_Os12g18320|protein_coding|CODING|LOC_Os12g18320.1|2|1) FN3413-S.SNP.12:10578002 chr12:010578002 0 W/10578002-10578002 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.998822;DP=2860;DP4=1465,1303,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.0027972;MQB=6.30694e-09;MQSB=0.372226;RPB=0.553134;SGB=71.3514;VDB=0.0389877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G248R|1226|LOC_Os12g18320|protein_coding|CODING|LOC_Os12g18320.1|1|1) FN2646-S.SNP.12:10582545 chr12:010582545 0 W/10582545-10582545 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.765505;DP=4931;DP4=2328,2241,16,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.43963e-11;MQSB=2.0887e-11;RPB=0.960182;SGB=42.5108;VDB=0.174553;EFF=INTERGENIC(MODIFIER||||||||||1) FN-188.SNP.12:10583626 chr12:010583626 0 W/10583626-10583626 FN-188 Single Base Substitution G-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN3889-S.SNP.12:10584318 chr12:010584318 0 W/10584318-10584318 FN3889-S SNP G -> A AC=1;AN=158;BQB=0.999563;DP=2605;DP4=1197,1315,6,7;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00307102;MQB=2.20879e-07;MQSB=0.504278;RPB=0.933587;SGB=34.0735;VDB=0.997556;EFF=INTERGENIC(MODIFIER||||||||||1) FN2572-S.SNP.12:10592411 chr12:010592411 0 W/10592411-10592411 FN2572-S SNP T -> G AC=1;AN=198;BQB=0.912959;DP=4471;DP4=2002,2228,14,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00514426;MQB=3.39642e-08;MQSB=0.112809;RPB=0.101197;SGB=47.5102;VDB=0.0124807;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.12:10594129 chr12:010594129 0 W/10594129-10594129 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.941774;DP=4765;DP4=2589,1837,12,14;HOB=5.10152e-05;ICB=0.000102546;MQ=32;MQ0F=0.0852046;MQB=0.914728;MQSB=0;RPB=0.993982;SGB=-8.4797;VDB=0.643612;EFF=INTERGENIC(MODIFIER||||||||||1) FN1014-S.SNP.12:10595698 chr12:010595698 0 W/10595698-10595698 FN1014-S Single Base Substitution C-T INTERGENIC HOMO SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN2257-S.SNP.12:10597659 chr12:010597659 0 W/10597659-10597659 FN2257-S SNP C -> A AC=1;AN=190;BQB=0.144052;DP=3945;DP4=2168,1435,13,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00532319;MQB=2.4515e-07;MQSB=0.945215;RPB=0.991704;SGB=44.0907;VDB=0.522591;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aAt|T214N|1672|LOC_Os12g18350|protein_coding|CODING|LOC_Os12g18350.1|3|1) FN3610-S.SNP.12:10599336 chr12:010599336 0 W/10599336-10599336 FN3610-S SNP C -> A AC=1;AN=190;BQB=0.952275;DP=2853;DP4=1371,1388,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.3611e-06;MQSB=0.280098;RPB=0.529831;SGB=21.1058;VDB=0.720497;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P773H|1672|LOC_Os12g18350|protein_coding|CODING|LOC_Os12g18350.1|3|1) FN1099-S.SNP.12:10603237 chr12:010603237 0 W/10603237-10603237 FN1099-S Single Base Substitution G-A INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN-107.SNP.12:10607271 chr12:010607271 0 W/10607271-10607271 FN-107 Single Base Substitution C-G INTRON HET SNo: 107, Mutant_ID: FN-107, Generation: M2, Mutations: 55, Genes: 27, Seed availability: Yes. FN-274.SNP.12:10608311 chr12:010608311 0 W/10608311-10608311 FN-274 Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4040-S.SNP.12:10619740 chr12:010619740 0 W/10619740-10619740 FN4040-S SNP G -> T AC=2;AN=168;BQB=0.241557;DP=1389;DP4=1037,257,7,6;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=0.0131916;MQSB=0.00495236;RPB=0.785883;SGB=34.748;VDB=0.247741;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.12:10632186 chr12:010632186 0 W/10632186-10632186 FN2698-S SNP C -> T AC=1;AN=200;BQB=0.149605;DP=4468;DP4=2116,2040,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95824e-07;MQSB=0.999917;RPB=0.429219;SGB=36.6644;VDB=0.124591;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V727|1096|LOC_Os12g18374|protein_coding|CODING|LOC_Os12g18374.2|2|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V727|1116|LOC_Os12g18374|protein_coding|CODING|LOC_Os12g18374.1|2|1) FN3799-S.SNP.12:10646838 chr12:010646838 0 W/10646838-10646838 FN3799-S SNP C -> A AC=1;AN=190;BQB=0.942855;DP=2494;DP4=1292,952,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00130928;MQSB=0.485432;RPB=0.96542;SGB=26.3271;VDB=0.559649;EFF=INTRON(MODIFIER||||938|LOC_Os12g18400|protein_coding|CODING|LOC_Os12g18400.1|4|1) FN2202-S.SNP.12:10646950 chr12:010646950 0 W/10646950-10646950 FN2202-S SNP G -> A AC=2;AN=190;BQB=0.00125392;DP=4536;DP4=1977,2031,17,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.20113e-16;MQSB=0.761154;RPB=0.412666;SGB=-137.682;VDB=0.45674;EFF=INTRON(MODIFIER||||938|LOC_Os12g18400|protein_coding|CODING|LOC_Os12g18400.1|4|1) FN2128-S.SNP.12:10647413 chr12:010647413 0 W/10647413-10647413 FN2128-S SNP C -> G AC=1;AN=168;BQB=0.243004;DP=3612;DP4=1916,1644,17,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.75072e-14;MQSB=0.960812;RPB=0.0732327;SGB=-11.4952;VDB=0.117962;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E518Q|938|LOC_Os12g18400|protein_coding|CODING|LOC_Os12g18400.1|4|1) FN2296.SNP.12:10660835 chr12:010660835 0 W/10660835-10660835 FN2296 SNP C -> A AC=1;AN=192;BQB=0.841642;DP=4362;DP4=2293,1791,24,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.09171e-15;MQSB=0.145174;RPB=0.509348;SGB=29.2557;VDB=0.100661;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acA|T14|81|LOC_Os12g18430|protein_coding|CODING|LOC_Os12g18430.1|1|1) FN2704-S.SNP.12:10662318 chr12:010662318 0 W/10662318-10662318 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.925672;DP=9464;DP4=6895,2285,12,4;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0845309;MQB=0.266732;MQSB=0;RPB=0.0134509;SGB=47.4799;VDB=0.0360591;EFF=INTRON(MODIFIER||||81|LOC_Os12g18430|protein_coding|CODING|LOC_Os12g18430.1|1|1) FN-380.SNP.12:10663694 chr12:010663694 0 W/10663694-10663694 FN-380 Single Base Substitution C-T INTERGENIC HET SNo: 368, Mutant_ID: FN-380, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN1744-S.SNP.12:10667817 chr12:010667817 0 W/10667817-10667817 FN1744-S SNP G -> T AC=1;AN=188;BQB=0.205836;DP=3739;DP4=2076,1616,20,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.28703e-11;MQSB=0.996882;RPB=0.421683;SGB=-184.54;VDB=0.766154;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.12:10667817 chr12:010667817 0 W/10667817-10667817 FN917-S Single Base Substitution G-T INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN2470.SNP.12:10671869 chr12:010671869 0 W/10671869-10671869 FN2470 SNP A -> T AC=2;AN=200;BQB=0.301541;DP=4759;DP4=2128,2256,21,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.20421e-27;MQSB=0.801964;RPB=0.642039;SGB=155.635;VDB=0.729288;EFF=UTR_3_PRIME(MODIFIER||534||135|LOC_Os12g18450|protein_coding|CODING|LOC_Os12g18450.1|5|1) FN-43.SNP.12:10684337 chr12:010684337 0 W/10684337-10684337 FN-43 Single Base Substitution A-G INTRON Homo SNo: 43, Mutant_ID: FN-43, Generation: M2, Mutations: 18, Genes: 5, Seed availability: Yes. FN3359-S.SNP.12:10686597 chr12:010686597 0 W/10686597-10686597 FN3359-S SNP A -> T AC=1;AN=184;BQB=0.521633;DP=3253;DP4=1711,1394,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.84367e-07;MQSB=0.760043;RPB=0.996838;SGB=28.3187;VDB=0.66141;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.12:10687207 chr12:010687207 0 W/10687207-10687207 FN3615-S SNP C -> A AC=2;AN=190;BQB=0.87428;DP=2246;DP4=720,1437,3,19;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=7.94229e-09;MQSB=0.3577;RPB=0.916123;SGB=94.6341;VDB=0.587906;EFF=INTERGENIC(MODIFIER||||||||||1) FN558-S.SNP.12:10687572 chr12:010687572 0 W/10687572-10687572 FN558-S Single Base Substitution C-G INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN3709-S.SNP.12:10691036 chr12:010691036 0 W/10691036-10691036 FN3709-S SNP A -> T AC=2;AN=190;BQB=0.760595;DP=2973;DP4=1455,1431,15,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31676e-14;MQSB=0.957749;RPB=0.909493;SGB=103.742;VDB=0.29574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3709-S.SNP.12:10691037 chr12:010691037 0 W/10691037-10691037 FN3709-S SNP T -> A AC=2;AN=190;BQB=0.737567;DP=2954;DP4=1457,1385,18,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.67658e-17;MQSB=0.960256;RPB=0.776125;SGB=89.4087;VDB=0.236819;EFF=INTERGENIC(MODIFIER||||||||||1) FN4116-S.SNP.12:10696599 chr12:010696599 0 W/10696599-10696599 FN4116-S SNP T -> G AC=1;AN=182;BQB=0.920292;DP=2868;DP4=1395,1381,8,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.32461e-09;MQSB=0.989077;RPB=0.835683;SGB=66.6657;VDB=0.287158;EFF=INTRON(MODIFIER||||160|LOC_Os12g18500|protein_coding|CODING|LOC_Os12g18500.1|3|1) FN2703-S.SNP.12:10701689 chr12:010701689 0 W/10701689-10701689 FN2703-S SNP G -> A AC=1;AN=200;BQB=0.647131;DP=4681;DP4=2355,2091,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.27228e-08;MQSB=0.844559;RPB=0.268937;SGB=33.0593;VDB=0.237988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A149V|301|LOC_Os12g18510|protein_coding|CODING|LOC_Os12g18510.1|3|1),SPLICE_SITE_REGION(LOW||||301|LOC_Os12g18510|protein_coding|CODING|LOC_Os12g18510.1|3|1) FN2120-S.SNP.12:10722949 chr12:010722949 0 W/10722949-10722949 FN2120-S SNP C -> T AC=1;AN=168;BQB=0.203745;DP=3078;DP4=1312,1729,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.70615e-08;MQSB=0.921761;RPB=0.996106;SGB=-14.5109;VDB=0.808166;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.12:10724331 chr12:010724331 0 W/10724331-10724331 FN3933-S SNP A -> C AC=1;AN=158;BQB=0.713791;DP=2733;DP4=1225,1338,13,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.00706e-12;MQSB=0.977772;RPB=0.780674;SGB=-14.6908;VDB=0.103779;EFF=UTR_5_PRIME(MODIFIER||269||106|LOC_Os12g18550|protein_coding|CODING|LOC_Os12g18550.1|1|1) FN922-S.SNP.12:10724456 chr12:010724456 0 W/10724456-10724456 FN922-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 828, Mutant_ID: FN922-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN4275-S.SNP.12:10726118 chr12:010726118 0 W/10726118-10726118 FN4275-S SNP C -> T AC=1;AN=170;BQB=0.888236;DP=2570;DP4=1512,964,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.78032e-06;MQSB=0.300104;RPB=0.924076;SGB=-16.9896;VDB=0.198732;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.12:10729904 chr12:010729904 0 W/10729904-10729904 FN2124-S SNP T -> C AC=1;AN=168;BQB=0.126546;DP=3016;DP4=1630,1347,17,8;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00165782;MQB=0.289627;MQSB=0.453692;RPB=0.824158;SGB=-41.7816;VDB=0.187955;EFF=INTERGENIC(MODIFIER||||||||||1) FN449-S.SNP.12:10738249 chr12:010738249 0 W/10738249-10738249 FN449-S Single Base Substitution G-T INTERGENIC HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN1540-S.SNP.12:10743748 chr12:010743748 0 W/10743748-10743748 FN1540-S Single Base Substitution C-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN2266-S.SNP.12:10746687 chr12:010746687 0 W/10746687-10746687 FN2266-S SNP G -> C AC=2;AN=190;BQB=0.630629;DP=4206;DP4=1893,1978,19,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000475511;MQB=3.51589e-18;MQSB=0.962714;RPB=0.836722;SGB=162.942;VDB=0.0995095;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.12:10750396 chr12:010750396 0 W/10750396-10750396 FN3746-S SNP C -> T AC=1;AN=190;BQB=0.773445;DP=2905;DP4=1373,1442,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000344234;MQB=1.61543e-05;MQSB=0.5451;RPB=0.997476;SGB=28.9929;VDB=0.00556283;EFF=INTERGENIC(MODIFIER||||||||||1) FN3746-S.SNP.12:10750397 chr12:010750397 0 W/10750397-10750397 FN3746-S SNP C -> T AC=1;AN=190;BQB=0.988187;DP=2912;DP4=1352,1457,3,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000686813;MQB=1.2066e-06;MQSB=0.607802;RPB=0.931672;SGB=44.5415;VDB=0.0194294;EFF=INTERGENIC(MODIFIER||||||||||1) FN1086-S.SNP.12:10753975 chr12:010753975 0 W/10753975-10753975 FN1086-S Single Base Substitution T-A INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3424-S.SNP.12:10757218 chr12:010757218 0 W/10757218-10757218 FN3424-S SNP T -> A AC=1;AN=184;BQB=0.70593;DP=2401;DP4=1194,1113,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.33145e-09;MQSB=0.999682;RPB=0.389369;SGB=35.7479;VDB=0.585809;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agT|R374S|432|LOC_Os12g18630|protein_coding|CODING|LOC_Os12g18630.1|8|1) FN3424-S.SNP.12:10757219 chr12:010757219 0 W/10757219-10757219 FN3424-S SNP C -> G AC=1;AN=184;BQB=0.968575;DP=2382;DP4=1194,1122,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.89447e-09;MQSB=0.998235;RPB=0.580794;SGB=35.7479;VDB=0.412011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aCa|R374T|432|LOC_Os12g18630|protein_coding|CODING|LOC_Os12g18630.1|8|1) FN698-S.SNP.12:10758222 chr12:010758222 0 W/10758222-10758222 FN698-S Single Base Substitution G-A INTRON HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN1198-S.SNP.12:10762243 chr12:010762243 0 W/10762243-10762243 FN1198-S Single Base Substitution C-A INTRON HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1660-S.SNP.12:10762243 chr12:010762243 0 W/10762243-10762243 FN1660-S Single Base Substitution C-A INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN2740-S.SNP.12:10762243 chr12:010762243 0 W/10762243-10762243 FN2740-S SNP C -> A AC=2;AN=200;BQB=0.999885;DP=5237;DP4=2547,2396,20,29;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.89935e-27;MQSB=0.988997;RPB=0.615039;SGB=59.2502;VDB=0.0262255;EFF=INTRON(MODIFIER||||432|LOC_Os12g18630|protein_coding|CODING|LOC_Os12g18630.1|1|1) FN2452.SNP.12:10764333 chr12:010764333 0 W/10764333-10764333 FN2452 SNP T -> G AC=1;AN=200;BQB=0.99706;DP=4449;DP4=2103,1964,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.85505e-10;MQSB=0.149367;RPB=0.66182;SGB=39.9056;VDB=0.331753;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.12:10764335 chr12:010764335 0 W/10764335-10764335 FN2452 SNP A -> G AC=1;AN=200;BQB=0.71739;DP=4457;DP4=2157,1907,12,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.13842e-12;MQSB=0.206301;RPB=0.563466;SGB=-7.6637;VDB=0.47407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.12:10764920 chr12:010764920 0 W/10764920-10764920 FN1118-S Single Base Substitution T-C INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2648-S.SNP.12:10776927 chr12:010776927 0 W/10776927-10776927 FN2648-S SNP G -> A AC=1;AN=200;BQB=0.883927;DP=4888;DP4=1937,2732,8,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=9.80529e-08;MQSB=5.91393e-18;RPB=0.666809;SGB=68.0801;VDB=0.859003;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.12:10783644 chr12:010783644 0 W/10783644-10783644 FN2594-S SNP C -> T AC=1;AN=198;BQB=0.93281;DP=3354;DP4=1614,1547,6,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.44196e-07;MQSB=0.659014;RPB=0.160047;SGB=47.3393;VDB=0.946835;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.12:10789411 chr12:010789411 0 W/10789411-10789411 FN2139-S SNP T -> C AC=2;AN=168;BQB=0.992743;DP=1997;DP4=900,1022,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.94029e-15;MQSB=0.929376;RPB=0.998211;SGB=86.2102;VDB=0.853084;EFF=INTERGENIC(MODIFIER||||||||||1) FN2530-S.SNP.12:10790095 chr12:010790095 0 W/10790095-10790095 FN2530-S SNP C -> T AC=1;AN=198;BQB=0.534658;DP=4120;DP4=1957,1950,7,13;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=5.21186e-05;MQSB=0.964485;RPB=0.882865;SGB=61.7198;VDB=0.543974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2708-S.SNP.12:10792621 chr12:010792621 0 W/10792621-10792621 FN2708-S SNP A -> T AC=1;AN=200;BQB=0.917793;DP=4840;DP4=2194,2410,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81786e-13;MQSB=0.922415;RPB=0.96457;SGB=100.316;VDB=0.621998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.12:10798529 chr12:010798529 0 W/10798529-10798529 FN3818-S SNP G -> A AC=1;AN=190;BQB=0.826834;DP=2938;DP4=1404,1438,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.72315e-09;MQSB=0.992226;RPB=0.387934;SGB=23.6597;VDB=0.182042;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.12:10800352 chr12:010800352 0 W/10800352-10800352 FN2275-S SNP T -> C AC=1;AN=190;BQB=0.998215;DP=4662;DP4=2283,1973,26,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16819e-19;MQSB=0.969154;RPB=0.290905;SGB=117.84;VDB=0.230632;EFF=INTRON(MODIFIER||||586|LOC_Os12g18690|protein_coding|CODING|LOC_Os12g18690.1|2|1) FN3593-S.SNP.12:10800413 chr12:010800413 0 W/10800413-10800413 FN3593-S SNP G -> T AC=1;AN=190;BQB=0.478511;DP=2894;DP4=1387,1377,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000314007;MQSB=0.98027;RPB=0.0539833;SGB=13.4442;VDB=0.142881;EFF=INTRON(MODIFIER||||586|LOC_Os12g18690|protein_coding|CODING|LOC_Os12g18690.1|2|1) FN1048-S.SNP.12:10802794 chr12:010802794 0 W/10802794-10802794 FN1048-S Single Base Substitution T-C INTERGENIC HET SNo: 942, Mutant_ID: FN1048-S, Generation: M2, Mutations: 91, Genes: 123, Seed availability: Yes. FN3540-S.SNP.12:10803927 chr12:010803927 0 W/10803927-10803927 FN3540-S SNP T -> A AC=1;AN=188;BQB=0.999299;DP=3073;DP4=1680,1276,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75102e-09;MQSB=0.526553;RPB=0.88407;SGB=31.1628;VDB=0.808756;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.12:10805978 chr12:010805978 0 W/10805978-10805978 FN3316-S SNP T -> A AC=2;AN=184;BQB=0.9859;DP=2566;DP4=1149,1338,8,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.78917e-11;MQSB=0.997685;RPB=0.28909;SGB=56.8786;VDB=0.326743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2164-S.SNP.12:10806223 chr12:010806223 0 W/10806223-10806223 FN2164-S SNP G -> A AC=2;AN=168;BQB=0.220872;DP=4161;DP4=1922,2150,28,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.12491e-23;MQSB=0.993419;RPB=0.931133;SGB=-127.697;VDB=0.179081;EFF=INTERGENIC(MODIFIER||||||||||1) FN_807-3-1.SNP.12:10816464 chr12:010816464 0 W/10816464-10816464 FN_807-3-1 Single Base Substitution C-T HET SNo: 1487, Mutant_ID: FN_807-3-1, Generation: M3, Mutations: 64, Genes: 18, Seed availability: Yes. FN2597-S.SNP.12:10816741 chr12:010816741 0 W/10816741-10816741 FN2597-S SNP G -> A AC=1;AN=198;BQB=0.677788;DP=4071;DP4=1934,1966,11,10;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.54655e-08;MQSB=0.794341;RPB=0.724913;SGB=65.3149;VDB=0.0673737;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A170|206|LOC_Os12g18710|protein_coding|CODING|LOC_Os12g18710.1|4|1) FN4151-S.SNP.12:10818097 chr12:010818097 0 W/10818097-10818097 FN4151-S SNP C -> T AC=1;AN=170;BQB=0.483764;DP=1979;DP4=1009,887,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.07351e-05;MQSB=0.986438;RPB=0.816277;SGB=34.5445;VDB=0.966215;EFF=INTERGENIC(MODIFIER||||||||||1) FN3381-S.SNP.12:10826593 chr12:010826593 0 W/10826593-10826593 FN3381-S SNP C -> T AC=2;AN=184;BQB=0.870454;DP=3042;DP4=1578,1348,11,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.90839e-13;MQSB=0.836443;RPB=0.731402;SGB=85.0529;VDB=0.463331;EFF=INTRON(MODIFIER||||909|LOC_Os12g18729|protein_coding|CODING|LOC_Os12g18729.1|2|1),INTRON(MODIFIER||||868|LOC_Os12g18729|protein_coding|CODING|LOC_Os12g18729.2|3|1),INTRON(MODIFIER||||868|LOC_Os12g18729|protein_coding|CODING|LOC_Os12g18729.3|3|1),INTRON(MODIFIER||||868|LOC_Os12g18729|protein_coding|CODING|LOC_Os12g18729.4|3|1),INTRON(MODIFIER||||868|LOC_Os12g18729|protein_coding|CODING|LOC_Os12g18729.5|2|1) FN-329.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN-329 Single Base Substitution G-A INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. FN1430-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN1430-S Single Base Substitution G-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN1619-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN1619-S Single Base Substitution G-A INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN2121-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN2121-S SNP G -> A AC=1;AN=168;BQB=0.838833;DP=1871;DP4=896,904,5,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00014343;MQSB=0.87615;RPB=0.11456;SGB=-1.53256;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN2185-S SNP G -> A AC=1;AN=190;BQB=0.996435;DP=4090;DP4=1884,1844,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25881e-10;MQSB=0.810353;RPB=0.662858;SGB=64.5316;VDB=0.0198201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3359-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN3359-S SNP G -> A AC=2;AN=184;BQB=0.180204;DP=3662;DP4=1832,1727,18,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.44495e-14;MQSB=0.940268;RPB=0.999863;SGB=71.1891;VDB=0.810941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3792-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN3792-S SNP G -> A AC=2;AN=190;BQB=0.989867;DP=2858;DP4=1390,1373,15,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.45921e-13;MQSB=0.752925;RPB=0.747348;SGB=117.403;VDB=0.842745;EFF=INTERGENIC(MODIFIER||||||||||1) FN4049-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN4049-S SNP G -> A AC=2;AN=168;BQB=0.847283;DP=2533;DP4=1345,1104,12,9;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.49428e-10;MQSB=0.952808;RPB=0.870696;SGB=36.7696;VDB=0.707804;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN4128-S SNP G -> A AC=1;AN=182;BQB=0.115344;DP=2978;DP4=1460,1452,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.23706e-05;MQSB=0.543413;RPB=0.864579;SGB=53.1331;VDB=0.287376;EFF=INTERGENIC(MODIFIER||||||||||1) FN437-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN437-S Single Base Substitution G-A INTERGENIC HOMO SNo: 436, Mutant_ID: FN437-S, Generation: M2, Mutations: 62, Genes: 50, Seed availability: Yes. FN550-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN550-S Single Base Substitution G-A INTERGENIC HOMO SNo: 545, Mutant_ID: FN550-S, Generation: M2, Mutations: 76, Genes: 36, Seed availability: Yes. FN673-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN673-S Single Base Substitution G-A INTERGENIC HOMO SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN885-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN885-S Single Base Substitution G-A INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN912-S.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN912-S Single Base Substitution G-A INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN_789-2-1.SNP.12:10844427 chr12:010844427 0 W/10844427-10844427 FN_789-2-1 Single Base Substitution G-A HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN3729-S.SNP.12:10847767 chr12:010847767 0 W/10847767-10847767 FN3729-S SNP C -> T AC=1;AN=190;BQB=0.9715;DP=2597;DP4=1378,1117,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00115518;MQB=1.94994e-07;MQSB=0.215097;RPB=0.870342;SGB=58.2031;VDB=0.536579;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.12:10853432 chr12:010853432 0 W/10853432-10853432 FN680-S Single Base Substitution G-A INTRON HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1379-S.SNP.12:10856436 chr12:010856436 0 W/10856436-10856436 FN1379-S Single Base Substitution A-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2420.SNP.12:10858633 chr12:010858633 0 W/10858633-10858633 FN2420 SNP G -> A AC=1;AN=200;BQB=0.981563;DP=5116;DP4=2490,2299,9,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.6739e-14;MQSB=0.713731;RPB=0.999373;SGB=76.3213;VDB=0.460853;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.12:10858954 chr12:010858954 0 W/10858954-10858954 FN3700-S SNP A -> T AC=1;AN=190;BQB=0.998844;DP=2823;DP4=1442,1313,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.31057e-09;MQSB=0.965158;RPB=0.773595;SGB=39.6545;VDB=0.462635;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.12:10862208 chr12:010862208 0 W/10862208-10862208 FN2659-S SNP C -> A AC=1;AN=200;BQB=0.831742;DP=5121;DP4=2569,2323,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.39032e-17;MQSB=0.661222;RPB=0.033478;SGB=118.737;VDB=0.217369;EFF=INTERGENIC(MODIFIER||||||||||1) FN950-S.SNP.12:10874167 chr12:010874167 0 W/10874167-10874167 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-225.SNP.12:10876008 chr12:010876008 0 W/10876008-10876008 FN-225 Single Base Substitution C-A INTRON HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-225.SNP.12:10876009 chr12:010876009 0 W/10876009-10876009 FN-225 Single Base Substitution C-A INTRON HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN-305.SNP.12:10877060 chr12:010877060 0 W/10877060-10877060 FN-305 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g18780 expressed protein SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN2493.SNP.12:10886351 chr12:010886351 0 W/10886351-10886351 FN2493 SNP C -> T AC=2;AN=200;BQB=0.946764;DP=4631;DP4=2254,2078,19,26;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.523e-24;MQSB=0.949987;RPB=0.661311;SGB=102.43;VDB=0.297917;EFF=INTRON(MODIFIER||||563|LOC_Os12g18800|protein_coding|CODING|LOC_Os12g18800.1|5|1) FN2719-S.SNP.12:10886791 chr12:010886791 0 W/10886791-10886791 FN2719-S SNP C -> T AC=2;AN=200;BQB=0.532667;DP=5129;DP4=2530,2331,24,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.75091e-32;MQSB=0.931394;RPB=0.647245;SGB=177.266;VDB=0.00632728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M378I|563|LOC_Os12g18800|protein_coding|CODING|LOC_Os12g18800.1|5|1),SPLICE_SITE_REGION(LOW||||563|LOC_Os12g18800|protein_coding|CODING|LOC_Os12g18800.1|5|1) FN_955-1.SNP.12:10899614 chr12:010899614 0 W/10899614-10899614 FN_955-1 Single Base Substitution A-C Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3362-S.SNP.12:10901461 chr12:010901461 0 W/10901461-10901461 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.972874;DP=2544;DP4=1150,1323,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.16569e-10;MQSB=0.991854;RPB=0.858386;SGB=66.8296;VDB=0.0185912;EFF=INTRON(MODIFIER||||317|LOC_Os12g18820|protein_coding|CODING|LOC_Os12g18820.1|6|1) FN2765-S.SNP.12:10908092 chr12:010908092 0 W/10908092-10908092 FN2765-S SNP A -> G AC=1;AN=198;BQB=0.706949;DP=4074;DP4=1808,2109,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000981836;MQB=3.85516e-10;MQSB=0.116571;RPB=0.864411;SGB=31.9395;VDB=0.326003;EFF=INTERGENIC(MODIFIER||||||||||1) FN1158-S.SNP.12:10910550 chr12:010910550 0 W/10910550-10910550 FN1158-S Single Base Substitution T-C SYNONYMOUS_CODING HOMO SNo: 1012, Mutant_ID: FN1158-S, Generation: M2, Mutations: 80, Genes: 43, Seed availability: Yes. FN-125.SNP.12:10915341 chr12:010915341 0 W/10915341-10915341 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-14.SNP.12:10915341 chr12:010915341 0 W/10915341-10915341 FN-14 Single Base Substitution G-A INTERGENIC Homo SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1271-S.SNP.12:10915341 chr12:010915341 0 W/10915341-10915341 FN1271-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN2660-S.SNP.12:10915341 chr12:010915341 0 W/10915341-10915341 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.905614;DP=3836;DP4=2165,1403,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000260688;MQB=1.17733e-15;MQSB=0.271485;RPB=0.974844;SGB=97.9523;VDB=0.64345;EFF=INTERGENIC(MODIFIER||||||||||1) FN1519-S.SNP.12:10917642 chr12:010917642 0 W/10917642-10917642 FN1519-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN682-S.SNP.12:10921573 chr12:010921573 0 W/10921573-10921573 FN682-S Single Base Substitution T-G INTERGENIC HET SNo: 615, Mutant_ID: FN682-S, Generation: M2, Mutations: 39, Genes: 16, Seed availability: Yes. FN3662-S.SNP.12:10923315 chr12:010923315 0 W/10923315-10923315 FN3662-S SNP G -> T AC=1;AN=190;BQB=0.590716;DP=3764;DP4=2026,1613,5,13;HOB=5.54017e-05;ICB=0.000111386;MQ=17;MQ0F=0.51966;MQB=0.0468196;MQSB=0;RPB=0.983963;SGB=31.3213;VDB=0.219731;EFF=INTERGENIC(MODIFIER||||||||||1) FN1753-S.SNP.12:10925642 chr12:010925642 0 W/10925642-10925642 FN1753-S SNP A -> T AC=1;AN=188;BQB=0.999738;DP=2515;DP4=1072,1420,8,5;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0131213;MQB=0.465511;MQSB=1.63935e-05;RPB=0.254426;SGB=18.4463;VDB=0.158603;EFF=INTERGENIC(MODIFIER||||||||||1) FN1197-S.SNP.12:10926172 chr12:010926172 0 W/10926172-10926172 FN1197-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-150.SNP.12:10926371 chr12:010926371 0 W/10926371-10926371 FN-150 Single Base Substitution G-A INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN1366-S.SNP.12:10943526 chr12:010943526 0 W/10943526-10943526 FN1366-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN3371-S.SNP.12:10945771 chr12:010945771 0 W/10945771-10945771 FN3371-S SNP G -> A AC=1;AN=184;BQB=0.957242;DP=3173;DP4=1786,1292,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.86479e-10;MQSB=0.966948;RPB=0.958626;SGB=23.2751;VDB=0.398222;EFF=INTERGENIC(MODIFIER||||||||||1) FN533-S.SNP.12:10946166 chr12:010946166 0 W/10946166-10946166 FN533-S Single Base Substitution T-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN533-S.SNP.12:10946170 chr12:010946170 0 W/10946170-10946170 FN533-S Single Base Substitution C-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN4122-S.SNP.12:10949752 chr12:010949752 0 W/10949752-10949752 FN4122-S SNP C -> T AC=1;AN=182;BQB=0.999997;DP=3129;DP4=1606,1428,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.92831e-10;MQSB=0.986443;RPB=0.985975;SGB=75.6874;VDB=0.989811;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.12:10949861 chr12:010949861 0 W/10949861-10949861 FN3528-S SNP A -> G AC=1;AN=188;BQB=0.979886;DP=2712;DP4=1426,1199,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.07038e-11;MQSB=0.973862;RPB=0.799552;SGB=71.6954;VDB=0.461241;EFF=INTERGENIC(MODIFIER||||||||||1) FN520-S.SNP.12:10954655 chr12:010954655 0 W/10954655-10954655 FN520-S Single Base Substitution G-A INTERGENIC HOMO SNo: 518, Mutant_ID: FN520-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN2349.SNP.12:10966499 chr12:010966499 0 W/10966499-10966499 FN2349 SNP T -> G AC=1;AN=192;BQB=0.985993;DP=4870;DP4=2327,2284,10,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.00288e-10;MQSB=0.96027;RPB=0.402894;SGB=39.1713;VDB=0.524762;EFF=INTRON(MODIFIER||||469|LOC_Os12g18900|protein_coding|CODING|LOC_Os12g18900.1|9|1) FN-233.SNP.12:10968642 chr12:010968642 0 W/10968642-10968642 FN-233 Single Base Substitution A-T INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN1302-S.SNP.12:10975700 chr12:010975700 0 W/10975700-10975700 FN1302-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g18910 transposon protein, putative, unclassified, expressed SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2279-S.SNP.12:10976062 chr12:010976062 0 W/10976062-10976062 FN2279-S SNP T -> A AC=1;AN=190;BQB=0.736113;DP=5137;DP4=2234,2506,12,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82018e-13;MQSB=0.311124;RPB=0.998265;SGB=56.8601;VDB=0.247092;EFF=INTRON(MODIFIER||||533|LOC_Os12g18910|protein_coding|CODING|LOC_Os12g18910.1|1|1) FN2333.SNP.12:10980154 chr12:010980154 0 W/10980154-10980154 FN2333 SNP C -> T AC=1;AN=192;BQB=0.979282;DP=4626;DP4=2189,2192,15,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.49044e-13;MQSB=0.943924;RPB=0.505699;SGB=71.8591;VDB=0.54045;EFF=INTRON(MODIFIER||||644|LOC_Os12g18920|protein_coding|CODING|LOC_Os12g18920.1|5|1) FN1639-S.SNP.12:10986281 chr12:010986281 0 W/10986281-10986281 FN1639-S Single Base Substitution G-A INTRON HET SNo: 1344, Mutant_ID: FN1639-S, Generation: M2, Mutations: 84, Genes: 16, Seed availability: Yes. FN2279-S.SNP.12:10986986 chr12:010986986 0 W/10986986-10986986 FN2279-S SNP C -> T AC=1;AN=190;BQB=0.726431;DP=4704;DP4=2017,2330,12,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.22194e-14;MQSB=0.625487;RPB=0.998367;SGB=85.8548;VDB=0.317148;EFF=INTRON(MODIFIER||||483|LOC_Os12g18930|protein_coding|CODING|LOC_Os12g18930.1|2|1) FN503-S.SNP.12:10991695 chr12:010991695 0 W/10991695-10991695 FN503-S Single Base Substitution G-A INTERGENIC HET SNo: 501, Mutant_ID: FN503-S, Generation: M2, Mutations: 75, Genes: 104, Seed availability: Yes. FN587-S.SNP.12:10992719 chr12:010992719 0 W/10992719-10992719 FN587-S Single Base Substitution C-T INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN587-S.SNP.12:10992721 chr12:010992721 0 W/10992721-10992721 FN587-S Single Base Substitution T-A INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN1682-S.SNP.12:10996862 chr12:010996862 0 W/10996862-10996862 FN1682-S SNP G -> T AC=1;AN=188;BQB=0.018475;DP=3576;DP4=1778,1756,8,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.34107e-11;MQSB=0.839951;RPB=0.991263;SGB=-41.9316;VDB=0.935308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.12:10996863 chr12:010996863 0 W/10996863-10996863 FN1682-S SNP C -> T AC=1;AN=188;BQB=0.0671938;DP=3579;DP4=1774,1769,5,24;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.79168e-11;MQSB=0.834241;RPB=0.803568;SGB=-7.93693;VDB=0.500757;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.12:10998032 chr12:010998032 0 W/10998032-10998032 FN579-S Single Base Substitution C-T INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN778-S.SNP.12:10998902 chr12:010998902 0 W/10998902-10998902 FN778-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN_769-4-1.SNP.12:11007500 chr12:011007500 0 W/11007500-11007500 FN_769-4-1 Single Base Substitution A-G HET SNo: 1478, Mutant_ID: FN_769-4-1, Generation: M3, Mutations: 67, Genes: 29, Seed availability: No. FN1445-S.SNP.12:11013628 chr12:011013628 0 W/11013628-11013628 FN1445-S Single Base Substitution G-A INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN3842-S.SNP.12:11015377 chr12:011015377 0 W/11015377-11015377 FN3842-S SNP C -> T AC=2;AN=190;BQB=0.982401;DP=3672;DP4=1822,1649,21,22;HOB=0.020831;ICB=0.494793;MQ=38;MQ0F=0.0111656;MQB=0.276574;MQSB=7.84591e-17;RPB=0.988606;SGB=142.717;VDB=0.838968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1182-S.SNP.12:11022263 chr12:011022263 0 W/11022263-11022263 FN1182-S Single Base Substitution C-T INTERGENIC HET SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN2128-S.SNP.12:11023137 chr12:011023137 0 W/11023137-11023137 FN2128-S SNP G -> C AC=1;AN=168;BQB=0.984715;DP=1888;DP4=920,902,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.96951e-06;MQSB=0.357037;RPB=0.279239;SGB=48.4712;VDB=0.116482;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.12:11023826 chr12:011023826 0 W/11023826-11023826 FN-87 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g18990 retrotransposon protein, putative, unclassified SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN4147-S.SNP.12:11023990 chr12:011023990 0 W/11023990-11023990 FN4147-S SNP G -> C AC=2;AN=170;BQB=0.999796;DP=2335;DP4=851,1338,11,15;HOB=0.0232526;ICB=0.494188;MQ=39;MQ0F=0.0192719;MQB=0.212884;MQSB=3.01969e-06;RPB=0.579034;SGB=79.6325;VDB=0.971709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.12:11030803 chr12:011030803 0 W/11030803-11030803 FN2454 SNP G -> T AC=1;AN=200;BQB=0.94745;DP=3723;DP4=1696,1808,5,4;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000268601;MQB=0.509811;MQSB=0.871407;RPB=0.0520648;SGB=35.8441;VDB=0.347684;EFF=INTRON(MODIFIER||||1503|LOC_Os12g19000|protein_coding|CODING|LOC_Os12g19000.1|3|1) FN1257-S.SNP.12:11030984 chr12:011030984 0 W/11030984-11030984 FN1257-S Single Base Substitution G-A INTRON HET SNo: 1074, Mutant_ID: FN1257-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN-338.SNP.12:11032736 chr12:011032736 0 W/11032736-11032736 FN-338 Single Base Substitution C-T INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN1175-S.SNP.12:11037531 chr12:011037531 0 W/11037531-11037531 FN1175-S Single Base Substitution C-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN915-S.SNP.12:11040530 chr12:011040530 0 W/11040530-11040530 FN915-S Single Base Substitution T-C INTERGENIC HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN745-S.SNP.12:11040761 chr12:011040761 0 W/11040761-11040761 FN745-S Single Base Substitution T-C INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2690-S.SNP.12:11042992 chr12:011042992 0 W/11042992-11042992 FN2690-S SNP G -> A AC=1;AN=200;BQB=0.547224;DP=5241;DP4=2085,2758,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.11111e-08;MQSB=0.34517;RPB=0.399571;SGB=-13.1102;VDB=0.532804;EFF=INTERGENIC(MODIFIER||||||||||1) FN3095-S.SNP.12:11045513 chr12:011045513 0 W/11045513-11045513 FN3095-S SNP G -> A AC=2;AN=184;BQB=0.99041;DP=3045;DP4=1399,1520,17,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.44901e-16;MQSB=0.93284;RPB=0.998944;SGB=107.526;VDB=0.593057;EFF=INTERGENIC(MODIFIER||||||||||1) FN1030-S.SNP.12:11057555 chr12:011057555 0 W/11057555-11057555 FN1030-S Single Base Substitution T-C INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN740-S.SNP.12:11057626 chr12:011057626 0 W/11057626-11057626 FN740-S Single Base Substitution C-G INTERGENIC HET SNo: 665, Mutant_ID: FN740-S, Generation: M2, Mutations: 60, Genes: 59, Seed availability: Yes. FN1113-S.SNP.12:11059240 chr12:011059240 0 W/11059240-11059240 FN1113-S Single Base Substitution C-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN819-S.SNP.12:11077420 chr12:011077420 0 W/11077420-11077420 FN819-S Single Base Substitution G-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2782-S.SNP.12:11079043 chr12:011079043 0 W/11079043-11079043 FN2782-S SNP C -> T AC=1;AN=198;BQB=0.977072;DP=4098;DP4=2018,1898,12,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.15521e-10;MQSB=0.998861;RPB=0.999773;SGB=77.1196;VDB=0.610632;EFF=INTERGENIC(MODIFIER||||||||||1) FN-314.SNP.12:11080359 chr12:011080359 0 W/11080359-11080359 FN-314 Single Base Substitution T-A INTERGENIC HET SNo: 309, Mutant_ID: FN-314, Generation: M2, Mutations: 97, Genes: 18, Seed availability: Yes. FN3795-S.SNP.12:11083217 chr12:011083217 0 W/11083217-11083217 FN3795-S SNP G -> T AC=2;AN=190;BQB=0.83271;DP=3020;DP4=1428,1450,11,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.70251e-15;MQSB=0.999468;RPB=0.661603;SGB=89.4087;VDB=0.243279;EFF=INTRON(MODIFIER||||204|LOC_Os12g19090|protein_coding|CODING|LOC_Os12g19090.1|1|1) FN3438-S.SNP.12:11085206 chr12:011085206 0 W/11085206-11085206 FN3438-S SNP C -> T AC=1;AN=184;BQB=0.659293;DP=3440;DP4=1420,1924,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.37146e-06;MQSB=0.769099;RPB=0.998713;SGB=46.3132;VDB=0.639777;EFF=INTRON(MODIFIER||||148|LOC_Os12g19100|protein_coding|CODING|LOC_Os12g19100.1|1|1) FN4124-S.SNP.12:11093386 chr12:011093386 0 W/11093386-11093386 FN4124-S SNP A -> T AC=1;AN=182;BQB=0.975047;DP=3216;DP4=1413,1657,16,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.60317e-13;MQSB=0.6685;RPB=0.961038;SGB=17.2365;VDB=0.320192;EFF=INTERGENIC(MODIFIER||||||||||1) FN1200-S.SNP.12:11102992 chr12:011102992 0 W/11102992-11102992 FN1200-S Single Base Substitution C-T INTERGENIC HET SNo: 1032, Mutant_ID: FN1200-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN677-S.SNP.12:11102992 chr12:011102992 0 W/11102992-11102992 FN677-S Single Base Substitution C-T INTERGENIC HOMO SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN1916.SNP.12:11107699 chr12:011107699 0 W/11107699-11107699 FN1916 Single Base Substitution C-T Homo SNo: 1364, Mutant_ID: FN1916, Generation: M2, Mutations: 60, Genes: 36, Seed availability: Yes. FN1540-S.SNP.12:11108140 chr12:011108140 0 W/11108140-11108140 FN1540-S Single Base Substitution A-T STOP_GAINED HET LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN907-S.SNP.12:11108215 chr12:011108215 0 W/11108215-11108215 FN907-S Single Base Substitution A-T STOP_GAINED HET LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN3959-S.SNP.12:11109937 chr12:011109937 0 W/11109937-11109937 FN3959-S SNP C -> T AC=2;AN=168;BQB=0.999894;DP=3210;DP4=1572,1515,13,15;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.95272e-15;MQSB=0.947453;RPB=0.996134;SGB=118.635;VDB=0.29432;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D571N|797|LOC_Os12g19140|protein_coding|CODING|LOC_Os12g19140.1|4|1) FN-123.SNP.12:11111166 chr12:011111166 0 W/11111166-11111166 FN-123 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os12g19140 retrotransposon protein, putative, unclassified, expressed SNo: 123, Mutant_ID: FN-123, Generation: M2, Mutations: 49, Genes: 7, Seed availability: Yes. FN3676-S.SNP.12:11111189 chr12:011111189 0 W/11111189-11111189 FN3676-S SNP C -> T AC=1;AN=190;BQB=0.997243;DP=3090;DP4=1508,1487,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000323625;MQB=1.7256e-06;MQSB=0.990361;RPB=0.509508;SGB=62.7569;VDB=0.453417;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A178T|797|LOC_Os12g19140|protein_coding|CODING|LOC_Os12g19140.1|3|1) FN2609-S.SNP.12:11112950 chr12:011112950 0 W/11112950-11112950 FN2609-S SNP T -> C AC=2;AN=188;BQB=0.636379;DP=3167;DP4=1556,1184,17,30;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0599937;MQB=0.000592045;MQSB=2.0079e-06;RPB=0.121951;SGB=92.7567;VDB=0.623559;EFF=INTRON(MODIFIER||||797|LOC_Os12g19140|protein_coding|CODING|LOC_Os12g19140.1|1|1) FN832-S.SNP.12:11115435 chr12:011115435 0 W/11115435-11115435 FN832-S Single Base Substitution G-C INTERGENIC HET SNo: 745, Mutant_ID: FN832-S, Generation: M2, Mutations: 41, Genes: 33, Seed availability: Yes. FN2324.SNP.12:11123865 chr12:011123865 0 W/11123865-11123865 FN2324 SNP G -> A AC=1;AN=192;BQB=0.550165;DP=4819;DP4=2458,2099,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.11945e-09;MQSB=0.870448;RPB=0.716792;SGB=31.4783;VDB=0.596146;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C53|196|LOC_Os12g19160|protein_coding|CODING|LOC_Os12g19160.1|1|1) FN3723-S.SNP.12:11124013 chr12:011124013 0 W/11124013-11124013 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.73959;DP=3184;DP4=1390,1679,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.22583e-05;MQSB=0.982332;RPB=0.99696;SGB=39.9877;VDB=0.491369;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R4H|196|LOC_Os12g19160|protein_coding|CODING|LOC_Os12g19160.1|1|1) FN2314.SNP.12:11124487 chr12:011124487 0 W/11124487-11124487 FN2314 SNP C -> T AC=1;AN=192;BQB=0.478463;DP=4733;DP4=2530,1847,16,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.43267e-13;MQSB=0.984041;RPB=0.325682;SGB=-11.3826;VDB=0.113174;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.12:11139203 chr12:011139203 0 W/11139203-11139203 FN-248 Single Base Substitution A-G INTRON HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2380.SNP.12:11146856 chr12:011146856 0 W/11146856-11146856 FN2380 SNP C -> T AC=1;AN=192;BQB=0.858902;DP=4263;DP4=1440,2563,2,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.07697e-06;MQSB=0.999124;RPB=0.99242;SGB=44.6462;VDB=0.589945;EFF=INTERGENIC(MODIFIER||||||||||1) FN2205-S.SNP.12:11155537 chr12:011155537 0 W/11155537-11155537 FN2205-S SNP G -> A AC=1;AN=190;BQB=0.935847;DP=4354;DP4=2007,1925,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.10228e-17;MQSB=0.99454;RPB=0.980666;SGB=74.7373;VDB=0.323291;EFF=INTERGENIC(MODIFIER||||||||||1) FN-179.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN-179 Single Base Substitution C-T INTERGENIC HOMO SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN-269.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN-269 Single Base Substitution C-T INTERGENIC HOMO SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN2575-S.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN2575-S SNP C -> T AC=2;AN=186;BQB=0.37122;DP=2837;DP4=1300,1080,38,21;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=5.16553e-21;MQSB=0.121108;RPB=0.822254;SGB=89.5753;VDB=0.561019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN3383-S SNP C -> T AC=2;AN=184;BQB=0.725385;DP=2566;DP4=808,1526,14,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000389712;MQB=2.05222e-12;MQSB=0.914943;RPB=0.657219;SGB=143.7;VDB=0.774537;EFF=INTERGENIC(MODIFIER||||||||||1) FN3454-S.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN3454-S SNP C -> T AC=2;AN=184;BQB=0.988063;DP=2553;DP4=733,1624,9,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.71503e-11;MQSB=0.841992;RPB=0.615689;SGB=93.9603;VDB=0.789361;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN3776-S SNP C -> T AC=2;AN=190;BQB=0.796334;DP=1753;DP4=576,1000,2,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.4796e-07;MQSB=0.603507;RPB=0.997863;SGB=49.0954;VDB=0.855219;EFF=INTERGENIC(MODIFIER||||||||||1) FN723-S.SNP.12:11157391 chr12:011157391 0 W/11157391-11157391 FN723-S Single Base Substitution C-T INTERGENIC HOMO SNo: 648, Mutant_ID: FN723-S, Generation: M2, Mutations: 79, Genes: 235, Seed availability: Yes. FN1302-S.SNP.12:11172212 chr12:011172212 0 W/11172212-11172212 FN1302-S Single Base Substitution C-T INTRON HOMO SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN2350.SNP.12:11174182 chr12:011174182 0 W/11174182-11174182 FN2350 SNP C -> T AC=1;AN=192;BQB=0.760598;DP=4930;DP4=2120,2506,6,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.00020284;MQB=9.68065e-08;MQSB=0.816788;RPB=0.746611;SGB=21.2209;VDB=0.781526;EFF=INTERGENIC(MODIFIER||||||||||1) FN3937-S.SNP.12:11174556 chr12:011174556 0 W/11174556-11174556 FN3937-S SNP G -> A AC=2;AN=158;BQB=0.287435;DP=2591;DP4=1271,1193,15,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.35476e-10;MQSB=0.903913;RPB=0.999149;SGB=108.239;VDB=0.626631;EFF=INTERGENIC(MODIFIER||||||||||1) FN3476-S.SNP.12:11175516 chr12:011175516 0 W/11175516-11175516 FN3476-S SNP C -> A AC=1;AN=184;BQB=0.88126;DP=2827;DP4=1397,1350,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87724e-14;MQSB=0.994594;RPB=0.969196;SGB=98.4821;VDB=0.534844;EFF=INTRON(MODIFIER||||18|LOC_Os12g19280|protein_coding|CODING|LOC_Os12g19280.1|1|1) FN2149-S.SNP.12:11176061 chr12:011176061 0 W/11176061-11176061 FN2149-S SNP G -> A AC=1;AN=168;BQB=0.0128307;DP=3614;DP4=1747,1814,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.27765e-10;MQSB=0.986395;RPB=0.805794;SGB=-100.631;VDB=0.967877;EFF=INTRON(MODIFIER||||18|LOC_Os12g19280|protein_coding|CODING|LOC_Os12g19280.1|1|1) FN2497.SNP.12:11177593 chr12:011177593 0 W/11177593-11177593 FN2497 SNP G -> A AC=1;AN=200;BQB=0.791365;DP=4263;DP4=1926,2156,3,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.37859e-07;MQSB=0.650955;RPB=0.89797;SGB=19.0642;VDB=0.373411;EFF=INTRON(MODIFIER||||170|LOC_Os12g19285|protein_coding|CODING|LOC_Os12g19285.1|2|1) FN2702-S.SNP.12:11182667 chr12:011182667 0 W/11182667-11182667 FN2702-S SNP C -> G AC=1;AN=200;BQB=0.329484;DP=4745;DP4=2175,2292,6,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.3911e-10;MQSB=0.99193;RPB=0.972324;SGB=61.9006;VDB=0.681307;EFF=INTERGENIC(MODIFIER||||||||||1) FN-377.SNP.12:11196516 chr12:011196516 0 W/11196516-11196516 FN-377 Single Base Substitution A-T INTRON HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN3826-S.SNP.12:11205239 chr12:011205239 0 W/11205239-11205239 FN3826-S SNP G -> T AC=2;AN=190;BQB=0.632586;DP=2461;DP4=1325,1033,13,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.29277e-18;MQSB=0.903032;RPB=0.660076;SGB=85.8548;VDB=0.0969992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.12:11205243 chr12:011205243 0 W/11205243-11205243 FN3826-S SNP G -> T AC=2;AN=190;BQB=0.998925;DP=2468;DP4=1313,1042,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.34324e-17;MQSB=0.931762;RPB=0.525089;SGB=108.296;VDB=0.0104019;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.12:11205244 chr12:011205244 0 W/11205244-11205244 FN3826-S SNP A -> T AC=2;AN=190;BQB=0.986171;DP=2473;DP4=1331,1012,12,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.01856e-16;MQSB=0.980472;RPB=0.725198;SGB=78.7471;VDB=0.0290102;EFF=INTERGENIC(MODIFIER||||||||||1) FN3826-S.SNP.12:11205247 chr12:011205247 0 W/11205247-11205247 FN3826-S SNP G -> T AC=2;AN=190;BQB=0.961848;DP=2457;DP4=1302,1047,11,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92814e-16;MQSB=0.924156;RPB=0.815412;SGB=103.742;VDB=0.0133433;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.12:11207680 chr12:011207680 0 W/11207680-11207680 FN1278-S Single Base Substitution T-C INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2452.SNP.12:11208614 chr12:011208614 0 W/11208614-11208614 FN2452 SNP G -> A AC=1;AN=200;BQB=0.0245242;DP=3842;DP4=2045,1441,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56677e-06;MQSB=0.856842;RPB=0.675085;SGB=49.6594;VDB=0.577979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A147V|161|LOC_Os12g19330|protein_coding|CODING|LOC_Os12g19330.1|2|1) FN2650-S.SNP.12:11210205 chr12:011210205 0 W/11210205-11210205 FN2650-S SNP A -> C AC=2;AN=200;BQB=0.374665;DP=4875;DP4=2527,2086,27,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=6.81016e-27;MQSB=0.939917;RPB=0.0270154;SGB=52.8295;VDB=0.222118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.12:11210440 chr12:011210440 0 W/11210440-11210440 FN2765-S SNP C -> T AC=1;AN=198;BQB=0.975959;DP=4275;DP4=2057,1932,7,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.93696e-11;MQSB=0.968577;RPB=0.454262;SGB=44.9151;VDB=0.736574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1255-S.SNP.12:11213577 chr12:011213577 0 W/11213577-11213577 FN1255-S Single Base Substitution A-C INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3856-S.SNP.12:11217375 chr12:011217375 0 W/11217375-11217375 FN3856-S SNP A -> G AC=1;AN=158;BQB=0.816542;DP=1556;DP4=608,849,2,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.31287e-06;MQSB=0.996828;RPB=0.480455;SGB=23.9652;VDB=0.713138;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.12:11221149 chr12:011221149 0 W/11221149-11221149 FN1545-S Single Base Substitution G-C INTRON Homo SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN672-S.SNP.12:11224151 chr12:011224151 0 W/11224151-11224151 FN672-S Single Base Substitution C-A INTRON HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN3537-S.SNP.12:11231259 chr12:011231259 0 W/11231259-11231259 FN3537-S SNP A -> G AC=1;AN=188;BQB=0.999791;DP=2672;DP4=1312,1273,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.65427e-10;MQSB=0.952721;RPB=0.348782;SGB=53.7007;VDB=0.0491062;EFF=INTRON(MODIFIER||||285|LOC_Os12g19350|protein_coding|CODING|LOC_Os12g19350.1|1|1),INTRON(MODIFIER||||72|LOC_Os12g19350|protein_coding|CODING|LOC_Os12g19350.2|1|1) FN-250.SNP.12:11236449 chr12:011236449 0 W/11236449-11236449 FN-250 Single Base Substitution C-A INTERGENIC HOMO SNo: 249, Mutant_ID: FN-250, Generation: M2, Mutations: 41, Genes: 5, Seed availability: Yes. FN2438.SNP.12:11238463 chr12:011238463 0 W/11238463-11238463 FN2438 SNP T -> A AC=2;AN=200;BQB=0.956113;DP=4469;DP4=2014,2028,28,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.04846e-24;MQSB=0.824561;RPB=0.992767;SGB=118.061;VDB=0.598835;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.12:11250244 chr12:011250244 0 W/11250244-11250244 FN3698-S SNP A -> G AC=2;AN=188;BQB=0.988047;DP=3161;DP4=1419,1597,6,19;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.47402e-14;MQSB=0.987544;RPB=0.814696;SGB=78.7471;VDB=0.244428;EFF=INTRON(MODIFIER||||2065|LOC_Os12g19370|protein_coding|CODING|LOC_Os12g19370.1|11|1) FN347-S.SNP.12:11253480 chr12:011253480 0 W/11253480-11253480 FN347-S Single Base Substitution A-G INTRON HOMO SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN2403.SNP.12:11255291 chr12:011255291 0 W/11255291-11255291 FN2403 SNP A -> T AC=1;AN=200;BQB=0.857856;DP=4984;DP4=2470,2148,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.603e-06;MQSB=0.999789;RPB=0.41032;SGB=24.2746;VDB=0.949587;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gTt|D1652V|2065|LOC_Os12g19370|protein_coding|CODING|LOC_Os12g19370.1|22|1) FN3508-S.SNP.12:11262577 chr12:011262577 0 W/11262577-11262577 FN3508-S SNP A -> G AC=1;AN=188;BQB=0.385614;DP=2692;DP4=1459,1137,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53069e-05;MQSB=0.985267;RPB=0.996954;SGB=10.8165;VDB=0.895256;EFF=UTR_5_PRIME(MODIFIER||77||157|LOC_Os12g19381|protein_coding|CODING|LOC_Os12g19381.1|1|1|WARNING_TRANSCRIPT_INCOMPLETE) FN-298.SNP.12:11263223 chr12:011263223 0 W/11263223-11263223 FN-298 Single Base Substitution C-T INTRON HOMO SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN1193-S.SNP.12:11270727 chr12:011270727 0 W/11270727-11270727 FN1193-S Single Base Substitution C-T INTRON HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN554-S.SNP.12:11281045 chr12:011281045 0 W/11281045-11281045 FN554-S Single Base Substitution T-C INTERGENIC HOMO SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1300-S.SNP.12:11289335 chr12:011289335 0 W/11289335-11289335 FN1300-S Single Base Substitution C-A INTERGENIC HET SNo: 1109, Mutant_ID: FN1300-S, Generation: M2, Mutations: 78, Genes: 17, Seed availability: Yes. FN3599-S.SNP.12:11289335 chr12:011289335 0 W/11289335-11289335 FN3599-S SNP C -> A AC=2;AN=188;BQB=0.994122;DP=3163;DP4=1637,1352,21,16;HOB=0.0210502;ICB=0.494738;MQ=39;MQ0F=0.0695542;MQB=0.819513;MQSB=5.14524e-09;RPB=0.751493;SGB=121.023;VDB=0.75687;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.12:11299547 chr12:011299547 0 W/11299547-11299547 FN3743-S SNP G -> A AC=1;AN=188;BQB=0.998564;DP=2885;DP4=1469,1339,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.04687e-11;MQSB=0.848715;RPB=0.921912;SGB=76.4186;VDB=0.409408;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L4|203|LOC_Os12g19450|protein_coding|CODING|LOC_Os12g19450.1|1|1) FN-59.SNP.12:11299796 chr12:011299796 0 W/11299796-11299796 FN-59 Single Base Substitution T-G INTRON HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN-59.SNP.12:11299797 chr12:011299797 0 W/11299797-11299797 FN-59 Single Base Substitution C-T INTRON HET SNo: 59, Mutant_ID: FN-59, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2731-S.SNP.12:11300118 chr12:011300118 0 W/11300118-11300118 FN2731-S SNP C -> T AC=1;AN=200;BQB=0.271084;DP=5082;DP4=2431,2434,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.09283e-06;MQSB=0.615375;RPB=0.962977;SGB=35.8441;VDB=0.499805;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A31V|203|LOC_Os12g19450|protein_coding|CODING|LOC_Os12g19450.1|2|1) FN1112-S.SNP.12:11308543 chr12:011308543 0 W/11308543-11308543 FN1112-S Single Base Substitution A-G SPLICE_SITE_REGION HOMO SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN2599-S.SNP.12:11321773 chr12:011321773 0 W/11321773-11321773 FN2599-S SNP C -> T AC=1;AN=198;BQB=0.786516;DP=4716;DP4=2014,2429,11,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.10618e-08;MQSB=0.850062;RPB=0.0683946;SGB=61.7198;VDB=0.851358;EFF=UTR_3_PRIME(MODIFIER||671||169|LOC_Os12g19470|protein_coding|CODING|LOC_Os12g19470.1|1|1),UTR_3_PRIME(MODIFIER||671||175|LOC_Os12g19470|protein_coding|CODING|LOC_Os12g19470.2|2|1) FN2268-S.SNP.12:11324832 chr12:011324832 0 W/11324832-11324832 FN2268-S SNP G -> A AC=1;AN=190;BQB=0.707886;DP=4863;DP4=2240,2278,8,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.05801e-15;MQSB=0.825606;RPB=0.40691;SGB=121.957;VDB=0.105346;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.12:11329563 chr12:011329563 0 W/11329563-11329563 FN775-S Single Base Substitution C-T INTRON HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN775-S.SNP.12:11329564 chr12:011329564 0 W/11329564-11329564 FN775-S Single Base Substitution C-T INTRON HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN3421-S.SNP.12:11330083 chr12:011330083 0 W/11330083-11330083 FN3421-S SNP G -> A AC=1;AN=184;BQB=0.838762;DP=3345;DP4=1482,1760,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00119581;MQB=1.81685e-11;MQSB=0.592528;RPB=0.988235;SGB=60.4004;VDB=0.831037;EFF=INTRON(MODIFIER||||759|LOC_Os12g19480|protein_coding|CODING|LOC_Os12g19480.1|4|1) FN3528-S.SNP.12:11330961 chr12:011330961 0 W/11330961-11330961 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.294257;DP=3075;DP4=1431,1558,15,20;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0338211;MQB=3.19833e-09;MQSB=2.28381e-10;RPB=0.00173507;SGB=-320.981;VDB=0.187339;EFF=INTRON(MODIFIER||||759|LOC_Os12g19480|protein_coding|CODING|LOC_Os12g19480.1|4|1) FN1349-S.SNP.12:11332701 chr12:011332701 0 W/11332701-11332701 FN1349-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g19480 retrotransposon, putative, centromere-specific, expressed SNo: 1146, Mutant_ID: FN1349-S, Generation: M2, Mutations: 74, Genes: 82, Seed availability: Yes. FN1685-S.SNP.12:11333335 chr12:011333335 0 W/11333335-11333335 FN1685-S SNP C -> G AC=1;AN=188;BQB=0.339502;DP=4933;DP4=2409,2467,14,15;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0;MQB=2.19979e-06;MQSB=0.790213;RPB=0.996038;SGB=-75.0128;VDB=0.554045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.12:11336664 chr12:011336664 0 W/11336664-11336664 FN3468-S SNP T -> A AC=1;AN=184;BQB=0.899423;DP=3043;DP4=1286,1654,11,14;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=1.10157e-07;MQSB=1.25624e-32;RPB=0.803362;SGB=107.526;VDB=0.774097;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.12:11337078 chr12:011337078 0 W/11337078-11337078 FN-288 Single Base Substitution G-A INTERGENIC HET SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN1180-S.SNP.12:11337847 chr12:011337847 0 W/11337847-11337847 FN1180-S Single Base Substitution C-T INTERGENIC HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN859-S.SNP.12:11339818 chr12:011339818 0 W/11339818-11339818 FN859-S Single Base Substitution T-A INTRON HOMO SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN3687-S.SNP.12:11342750 chr12:011342750 0 W/11342750-11342750 FN3687-S SNP C -> A AC=2;AN=188;BQB=0.994214;DP=2838;DP4=1235,1452,20,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.13548e-23;MQSB=0.971066;RPB=0.995828;SGB=87.5066;VDB=0.446982;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.12:11342989 chr12:011342989 0 W/11342989-11342989 FN2480 SNP G -> A AC=1;AN=200;BQB=0.0865853;DP=4420;DP4=2042,2046,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.55605e-11;MQSB=0.902292;RPB=0.999249;SGB=54.6902;VDB=0.544883;EFF=INTERGENIC(MODIFIER||||||||||1) FN-190.SNP.12:11344789 chr12:011344789 0 W/11344789-11344789 FN-190 Single Base Substitution T-G INTERGENIC HET SNo: 190, Mutant_ID: FN-190, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN-181.SNP.12:11345655 chr12:011345655 0 W/11345655-11345655 FN-181 Single Base Substitution T-C INTERGENIC HET SNo: 181, Mutant_ID: FN-181, Generation: M2, Mutations: 70, Genes: 28, Seed availability: Yes. FN4151-S.SNP.12:11355257 chr12:011355257 0 W/11355257-11355257 FN4151-S SNP C -> T AC=1;AN=170;BQB=0.960114;DP=2743;DP4=1250,1409,3,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.40382e-06;MQSB=0.978574;RPB=0.999834;SGB=43.4296;VDB=0.345322;EFF=INTRON(MODIFIER||||442|LOC_Os12g19530|protein_coding|CODING|LOC_Os12g19530.1|7|1),INTRON(MODIFIER||||442|LOC_Os12g19530|protein_coding|CODING|LOC_Os12g19530.2|7|1) FN2729-S.SNP.12:11356787 chr12:011356787 0 W/11356787-11356787 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.423996;DP=5081;DP4=2245,2625,10,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30756e-12;MQSB=0.979848;RPB=0.627558;SGB=91.1059;VDB=0.2537;EFF=UTR_3_PRIME(MODIFIER||1015||442|LOC_Os12g19530|protein_coding|CODING|LOC_Os12g19530.2|9|1),UTR_3_PRIME(MODIFIER||1015||442|LOC_Os12g19530|protein_coding|CODING|LOC_Os12g19530.1|9|1) FN1695-S.SNP.12:11358181 chr12:011358181 0 W/11358181-11358181 FN1695-S SNP G -> A AC=2;AN=188;BQB=0.983284;DP=2494;DP4=1433,1004,7,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.6635e-08;MQSB=0.865077;RPB=0.462758;SGB=46.6141;VDB=0.613192;EFF=INTERGENIC(MODIFIER||||||||||1) FN-344.SNP.12:11362361 chr12:011362361 0 W/11362361-11362361 FN-344 Single Base Substitution C-T INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN3387-S.SNP.12:11363379 chr12:011363379 0 W/11363379-11363379 FN3387-S SNP A -> T AC=2;AN=184;BQB=0.996234;DP=2697;DP4=1198,1363,7,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.18625e-08;MQSB=0.998529;RPB=0.473219;SGB=42.7914;VDB=0.676733;EFF=INTRON(MODIFIER||||1259|LOC_Os12g19549|protein_coding|CODING|LOC_Os12g19549.1|12|1),INTRON(MODIFIER||||1170|LOC_Os12g19549|protein_coding|CODING|LOC_Os12g19549.2|11|1) FN1115-S.SNP.12:11366556 chr12:011366556 0 W/11366556-11366556 FN1115-S Single Base Substitution C-T INTRON HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN3791-S.SNP.12:11379256 chr12:011379256 0 W/11379256-11379256 FN3791-S SNP C -> T AC=1;AN=190;BQB=0.999233;DP=2392;DP4=1150,1152,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78774e-05;MQSB=0.993296;RPB=0.387762;SGB=25.439;VDB=0.25953;EFF=INTERGENIC(MODIFIER||||||||||1) FN1121-S.SNP.12:11381732 chr12:011381732 0 W/11381732-11381732 FN1121-S Single Base Substitution A-C INTERGENIC HET SNo: 993, Mutant_ID: FN1121-S, Generation: M2, Mutations: 76, Genes: 18, Seed availability: Yes. FN2221-S.SNP.12:11384330 chr12:011384330 0 W/11384330-11384330 FN2221-S SNP A -> G AC=2;AN=190;BQB=0.714599;DP=4713;DP4=2291,2113,28,34;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.59431e-30;MQSB=0.252909;RPB=0.527542;SGB=143.692;VDB=0.000666244;EFF=INTERGENIC(MODIFIER||||||||||1) FN3325-S.SNP.12:11386541 chr12:011386541 0 W/11386541-11386541 FN3325-S SNP T -> G AC=1;AN=184;BQB=0.878331;DP=4033;DP4=1793,2080,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.31644e-07;MQSB=1;RPB=0.906804;SGB=57.786;VDB=0.643938;EFF=INTERGENIC(MODIFIER||||||||||1) FN846-S.SNP.12:11396642 chr12:011396642 0 W/11396642-11396642 FN846-S Single Base Substitution A-G INTERGENIC HET SNo: 753, Mutant_ID: FN846-S, Generation: M2, Mutations: 76, Genes: 77, Seed availability: Yes. FN2260-S.SNP.12:11405657 chr12:011405657 0 W/11405657-11405657 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.968241;DP=4893;DP4=2128,2430,13,22;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82395e-17;MQSB=0.454412;RPB=0.999978;SGB=114.286;VDB=0.147084;EFF=INTERGENIC(MODIFIER||||||||||1) FN-212.SNP.12:11416966 chr12:011416966 0 W/11416966-11416966 FN-212 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 211, Mutant_ID: FN-212, Generation: M2, Mutations: 57, Genes: 132, Seed availability: Yes. FN3481-S.SNP.12:11422699 chr12:011422699 0 W/11422699-11422699 FN3481-S SNP C -> T AC=2;AN=184;BQB=0.847781;DP=2555;DP4=1253,1225,11,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.87149e-16;MQSB=0.918752;RPB=0.977895;SGB=88.5747;VDB=0.565471;EFF=INTRON(MODIFIER||||409|LOC_Os12g19590|protein_coding|CODING|LOC_Os12g19590.1|2|1),INTRON(MODIFIER||||263|LOC_Os12g19590|protein_coding|CODING|LOC_Os12g19590.2|2|1),INTRON(MODIFIER||||351|LOC_Os12g19590|protein_coding|CODING|LOC_Os12g19590.3|2|1) FN2541-S.SNP.12:11435225 chr12:011435225 0 W/11435225-11435225 FN2541-S SNP A -> G AC=1;AN=198;BQB=0.812732;DP=3932;DP4=1889,1789,9,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.67449e-10;MQSB=0.989716;RPB=0.690393;SGB=61.7198;VDB=0.633915;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.12:11440589 chr12:011440589 0 W/11440589-11440589 FN1271-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g19610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN793-S.SNP.12:11445167 chr12:011445167 0 W/11445167-11445167 FN793-S Single Base Substitution T-A INTERGENIC HOMO SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN920-S.SNP.12:11445947 chr12:011445947 0 W/11445947-11445947 FN920-S Single Base Substitution C-T INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN1533-S.SNP.12:11447632 chr12:011447632 0 W/11447632-11447632 FN1533-S Single Base Substitution T-C INTERGENIC Homo SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1385-S.SNP.12:11449680 chr12:011449680 0 W/11449680-11449680 FN1385-S Single Base Substitution G-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN1297-S.SNP.12:11450248 chr12:011450248 0 W/11450248-11450248 FN1297-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN3837-S.SNP.12:11450660 chr12:011450660 0 W/11450660-11450660 FN3837-S SNP G -> A AC=2;AN=190;BQB=0.540798;DP=2976;DP4=1510,1363,14,8;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=9.86724e-06;MQSB=0.0426417;RPB=0.999484;SGB=94.6341;VDB=0.90617;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L43|745|LOC_Os12g19640|protein_coding|CODING|LOC_Os12g19640.1|1|1) FN4089-S.SNP.12:11464627 chr12:011464627 0 W/11464627-11464627 FN4089-S SNP G -> A AC=1;AN=182;BQB=0.995104;DP=3250;DP4=1492,1691,2,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.85256e-07;MQSB=0.952532;RPB=0.192218;SGB=44.1115;VDB=0.30635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S3L|438|LOC_Os12g19670|protein_coding|CODING|LOC_Os12g19670.1|1|1) FN-118.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN-118 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 118, Mutant_ID: FN-118, Generation: M2, Mutations: 36, Genes: 80, Seed availability: Yes. FN-91.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN-91 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN1163-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN1163-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN1219-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN1219-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 1047, Mutant_ID: FN1219-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN1516-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN1516-S Single Base Substitution T-G UTR_3_PRIME Homo SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN1753-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN1753-S SNP T -> G AC=2;AN=188;BQB=0.713769;DP=2313;DP4=678,1581,5,20;HOB=0.0210502;ICB=0.494738;MQ=34;MQ0F=0.204064;MQB=0.883591;MQSB=0.887315;RPB=0.288723;SGB=19.4279;VDB=0.00116474;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN2309.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN2309 SNP T -> G AC=2;AN=192;BQB=0.805634;DP=4510;DP4=1378,2683,8,26;HOB=0.0206163;ICB=0.494846;MQ=40;MQ0F=0.0915743;MQB=0.0103047;MQSB=9.55431e-11;RPB=0.417436;SGB=33.9487;VDB=0.488164;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN2684-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN2684-S SNP T -> G AC=2;AN=200;BQB=0.717241;DP=4224;DP4=1458,2442,13,31;HOB=0.0198;ICB=0.495051;MQ=40;MQ0F=0.106297;MQB=0.00338405;MQSB=0.749967;RPB=0.589608;SGB=51.2243;VDB=0.113821;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN3552-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN3552-S SNP T -> G AC=2;AN=188;BQB=0.825189;DP=3175;DP4=1243,1713,16,19;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.139528;MQB=0.0167085;MQSB=4.39413e-07;RPB=0.936484;SGB=113.937;VDB=0.604133;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN3782-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN3782-S SNP T -> G AC=2;AN=190;BQB=0.993044;DP=2651;DP4=959,1497,11,15;HOB=0.020831;ICB=0.494793;MQ=36;MQ0F=0.153904;MQB=0.0296344;MQSB=0.000127383;RPB=0.533451;SGB=21.2038;VDB=0.0462461;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN3981-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN3981-S SNP T -> G AC=2;AN=168;BQB=0.99907;DP=2416;DP4=883,1348,11,17;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.146109;MQB=0.29507;MQSB=7.45461e-12;RPB=0.396105;SGB=86.2102;VDB=0.174063;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN4141-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN4141-S SNP T -> G AC=2;AN=170;BQB=0.99663;DP=2411;DP4=811,1451,10,17;HOB=0.0232526;ICB=0.494188;MQ=36;MQ0F=0.166321;MQB=0.0510833;MQSB=0.001995;RPB=0.493821;SGB=-11.2351;VDB=0.0177166;EFF=UTR_3_PRIME(MODIFIER||178||110|LOC_Os12g19680|protein_coding|CODING|LOC_Os12g19680.1|1|1) FN576-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN576-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN987-S.SNP.12:11468824 chr12:011468824 0 W/11468824-11468824 FN987-S Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN1550-S.SNP.12:11471423 chr12:011471423 0 W/11471423-11471423 FN1550-S Single Base Substitution T-C INTRON HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1022-S.SNP.12:11472904 chr12:011472904 0 W/11472904-11472904 FN1022-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g19700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN3378-S.SNP.12:11482831 chr12:011482831 0 W/11482831-11482831 FN3378-S SNP G -> C AC=1;AN=184;BQB=0.441669;DP=3145;DP4=1558,1479,19,14;HOB=5.90737e-05;ICB=0.00011879;MQ=19;MQ0F=0.32655;MQB=0.00359235;MQSB=3.24554e-26;RPB=0.983138;SGB=68.6673;VDB=0.999262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E2001Q|2174|LOC_Os12g19700|protein_coding|CODING|LOC_Os12g19700.1|5|1) FN2729-S.SNP.12:11488441 chr12:011488441 0 W/11488441-11488441 FN2729-S SNP G -> C AC=1;AN=200;BQB=0.692288;DP=6196;DP4=3330,2627,16,10;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0884442;MQB=0.950098;MQSB=4.92302e-10;RPB=0.960097;SGB=114.132;VDB=0.477019;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Caa|E679Q|930|LOC_Os12g19720|protein_coding|CODING|LOC_Os12g19720.1|1|1) FN2215-S.SNP.12:11490831 chr12:011490831 0 W/11490831-11490831 FN2215-S SNP A -> G AC=1;AN=190;BQB=0.649874;DP=5282;DP4=2165,2826,11,20;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.200114;MQB=0.258766;MQSB=0;RPB=0.144847;SGB=100.07;VDB=0.00495027;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.12:11492248 chr12:011492248 0 W/11492248-11492248 FN-199 Single Base Substitution G-C INTERGENIC HET SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-45.SNP.12:11497928 chr12:011497928 0 W/11497928-11497928 FN-45 Single Base Substitution C-G INTERGENIC HET SNo: 45, Mutant_ID: FN-45, Generation: M2, Mutations: 30, Genes: 47, Seed availability: Yes. FN1707-S.SNP.12:11500530 chr12:011500530 0 W/11500530-11500530 FN1707-S SNP A -> G AC=2;AN=188;BQB=0.0705187;DP=2670;DP4=1607,1019,14,15;HOB=0.0210502;ICB=0.494738;MQ=22;MQ0F=0.194382;MQB=0.999415;MQSB=0;RPB=0.143426;SGB=59.139;VDB=0.548935;EFF=INTRON(MODIFIER||||1406|LOC_Os12g19750|protein_coding|CODING|LOC_Os12g19750.1|1|1) FN3437-S.SNP.12:11500530 chr12:011500530 0 W/11500530-11500530 FN3437-S SNP A -> G AC=1;AN=184;BQB=0.940271;DP=2793;DP4=1526,1197,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.107053;MQB=0.988292;MQSB=5.60519e-45;RPB=0.999201;SGB=44.2207;VDB=0.876459;EFF=INTRON(MODIFIER||||1406|LOC_Os12g19750|protein_coding|CODING|LOC_Os12g19750.1|1|1) FN4137-S.SNP.12:11500530 chr12:011500530 0 W/11500530-11500530 FN4137-S SNP A -> G AC=2;AN=170;BQB=0.468877;DP=2395;DP4=1344,989,16,8;HOB=0.0232526;ICB=0.494188;MQ=31;MQ0F=0.133194;MQB=0.839211;MQSB=1.37037e-36;RPB=0.80336;SGB=72.7472;VDB=0.460852;EFF=INTRON(MODIFIER||||1406|LOC_Os12g19750|protein_coding|CODING|LOC_Os12g19750.1|1|1) FN2137-S.SNP.12:11501707 chr12:011501707 0 W/11501707-11501707 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.730144;DP=2785;DP4=1370,1364,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=33;MQ0F=0.0043088;MQB=0.396985;MQSB=7.00649e-45;RPB=0.999374;SGB=11.3448;VDB=0.881842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S57L|1406|LOC_Os12g19750|protein_coding|CODING|LOC_Os12g19750.1|3|1) FN630-S.SNP.12:11506229 chr12:011506229 0 W/11506229-11506229 FN630-S Single Base Substitution C-T INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1464-S.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN1464-S Single Base Substitution A-C INTERGENIC HET SNo: 1232, Mutant_ID: FN1464-S, Generation: M2, Mutations: 58, Genes: 44, Seed availability: Yes. FN2221-S.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN2221-S SNP A -> C AC=2;AN=190;BQB=0.860458;DP=2701;DP4=1484,916,16,8;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.0244354;MQB=0.714331;MQSB=5.9338e-31;RPB=0.276773;SGB=103.742;VDB=0.00656804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN2429 SNP A -> C AC=1;AN=200;BQB=0.854375;DP=2572;DP4=1511,813,17,4;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0252722;MQB=0.106745;MQSB=6.93454e-18;RPB=0.6377;SGB=91.1059;VDB=0.170089;EFF=INTERGENIC(MODIFIER||||||||||1) FN3453-S.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN3453-S SNP A -> C AC=2;AN=184;BQB=0.973501;DP=2639;DP4=1093,1367,12,16;HOB=0.0215028;ICB=0.494625;MQ=31;MQ0F=0.131868;MQB=0.630715;MQSB=0;RPB=0.779051;SGB=23.542;VDB=0.662543;EFF=INTERGENIC(MODIFIER||||||||||1) FN621-S.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN621-S Single Base Substitution A-C INTERGENIC HOMO SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN715-S.SNP.12:11519557 chr12:011519557 0 W/11519557-11519557 FN715-S Single Base Substitution A-C INTERGENIC HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN2415.SNP.12:11525522 chr12:011525522 0 W/11525522-11525522 FN2415 SNP G -> A AC=2;AN=200;BQB=0.0367128;DP=3458;DP4=1380,1820,7,16;HOB=0.0198;ICB=0.495051;MQ=23;MQ0F=0.217467;MQB=0.305348;MQSB=0;RPB=0.566865;SGB=-10.0844;VDB=0.87987;EFF=INTRON(MODIFIER||||1557|LOC_Os12g19770|protein_coding|CODING|LOC_Os12g19770.1|2|1) FN2600-S.SNP.12:11532101 chr12:011532101 0 W/11532101-11532101 FN2600-S SNP T -> C AC=1;AN=198;BQB=0.639862;DP=4536;DP4=2264,2082,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=26;MQ0F=0.178571;MQB=0.952598;MQSB=0;RPB=0.936663;SGB=54.144;VDB=0.47314;EFF=INTERGENIC(MODIFIER||||||||||1) FN2592-S.SNP.12:11536112 chr12:011536112 0 W/11536112-11536112 FN2592-S SNP G -> A AC=2;AN=186;BQB=0.995281;DP=3704;DP4=1834,1668,21,27;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=1.01945e-25;MQSB=0.975908;RPB=0.669405;SGB=162.383;VDB=0.114028;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E573K|679|LOC_Os12g19790|protein_coding|CODING|LOC_Os12g19790.1|5|1) FN3833-S.SNP.12:11556599 chr12:011556599 0 W/11556599-11556599 FN3833-S SNP T -> C AC=2;AN=190;BQB=0.999927;DP=2943;DP4=1284,1520,11,17;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.00407747;MQB=0.887942;MQSB=0.892312;RPB=0.15513;SGB=121.957;VDB=0.932967;EFF=INTRON(MODIFIER||||1048|LOC_Os12g19810|protein_coding|CODING|LOC_Os12g19810.1|3|1) 703-4.SNP.12:11562517 chr12:011562517 0 W/11562517-11562517 703-4 Single Base Substitution G-A INTERGENIC Homo SNo: 1453, Mutant_ID: 703-4, Generation: M2, Mutations: 34, Genes: 72, Seed availability: Yes. FN-397.SNP.12:11564279 chr12:011564279 0 W/11564279-11564279 FN-397 Single Base Substitution C-T INTERGENIC HOMO SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN1633-S.SNP.12:11575156 chr12:011575156 0 W/11575156-11575156 FN1633-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g19850 retrotransposon protein, putative, unclassified SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN-173.SNP.12:11576148 chr12:011576148 0 W/11576148-11576148 FN-173 Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 173, Mutant_ID: FN-173, Generation: M2, Mutations: 63, Genes: 16, Seed availability: Yes. FN3758-S.SNP.12:11576825 chr12:011576825 0 W/11576825-11576825 FN3758-S SNP C -> G AC=1;AN=190;BQB=0.183966;DP=2695;DP4=843,1529,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.14689e-06;MQSB=0.996834;RPB=0.976458;SGB=-35.4322;VDB=0.725062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1384-S.SNP.12:11578327 chr12:011578327 0 W/11578327-11578327 FN1384-S Single Base Substitution G-A INTRON HET SNo: 1170, Mutant_ID: FN1384-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN2471.SNP.12:11579860 chr12:011579860 0 W/11579860-11579860 FN2471 SNP C -> A AC=1;AN=200;BQB=0.966227;DP=3560;DP4=1920,1354,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000561798;MQB=2.03856e-10;MQSB=0.259279;RPB=0.319786;SGB=100.316;VDB=0.493934;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.12:11580663 chr12:011580663 0 W/11580663-11580663 FN3940-S SNP C -> T AC=1;AN=158;BQB=0.994493;DP=2523;DP4=1158,1281,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=39;MQ0F=0.0439952;MQB=0.968849;MQSB=0.999522;RPB=0.863521;SGB=44.1818;VDB=0.283311;EFF=INTERGENIC(MODIFIER||||||||||1) FN3811-S.SNP.12:11580744 chr12:011580744 0 W/11580744-11580744 FN3811-S SNP G -> A AC=1;AN=190;BQB=0.986749;DP=2879;DP4=1330,1448,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00798889;MQB=0.28713;MQSB=0.0315735;RPB=0.790944;SGB=85.5263;VDB=0.653053;EFF=INTERGENIC(MODIFIER||||||||||1) FN2423.SNP.12:11586134 chr12:011586134 0 W/11586134-11586134 FN2423 SNP C -> T AC=2;AN=200;BQB=0.996651;DP=4669;DP4=2162,2090,30,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25528e-29;MQSB=0.965914;RPB=0.397367;SGB=64.0657;VDB=0.0843158;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D478N|636|LOC_Os12g19890|protein_coding|CODING|LOC_Os12g19890.1|5|1) FN3593-S.SNP.12:11587255 chr12:011587255 0 W/11587255-11587255 FN3593-S SNP C -> T AC=1;AN=190;BQB=1;DP=2859;DP4=1474,1275,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.50306e-07;MQSB=0.770202;RPB=0.922673;SGB=32.5467;VDB=0.44694;EFF=INTRON(MODIFIER||||636|LOC_Os12g19890|protein_coding|CODING|LOC_Os12g19890.1|3|1) FN3909-S.SNP.12:11592527 chr12:011592527 0 W/11592527-11592527 FN3909-S SNP A -> G AC=1;AN=158;BQB=0.963809;DP=2635;DP4=1393,1176,7,6;HOB=8.01154e-05;ICB=0.000161245;MQ=40;MQ0F=0.0421252;MQB=0.610303;MQSB=0.00280135;RPB=0.751324;SGB=34.0735;VDB=0.342346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cCg|L971P|1791|LOC_Os12g19900|protein_coding|CODING|LOC_Os12g19900.1|3|1) FN1537-S.SNP.12:11599392 chr12:011599392 0 W/11599392-11599392 FN1537-S Single Base Substitution A-G INTERGENIC HET SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1074-S.SNP.12:11603592 chr12:011603592 0 W/11603592-11603592 FN1074-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g19910 expressed protein SNo: 961, Mutant_ID: FN1074-S, Generation: M2, Mutations: 20, Genes: 25, Seed availability: Yes. FN2244-S.SNP.12:11613192 chr12:011613192 0 W/11613192-11613192 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.0725889;DP=5640;DP4=2253,2867,8,23;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0796099;MQB=0.952098;MQSB=0.0482899;RPB=0.260259;SGB=135.619;VDB=0.748696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R208H|443|LOC_Os12g19930|protein_coding|CODING|LOC_Os12g19930.1|3|1) FN2652-S.SNP.12:11613192 chr12:011613192 0 W/11613192-11613192 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.945732;DP=5992;DP4=2391,3232,20,33;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0819426;MQB=0.928971;MQSB=0.942552;RPB=0.11029;SGB=180.871;VDB=0.515098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R208H|443|LOC_Os12g19930|protein_coding|CODING|LOC_Os12g19930.1|3|1) FN4100-S.SNP.12:11613192 chr12:011613192 0 W/11613192-11613192 FN4100-S SNP C -> T AC=1;AN=182;BQB=0.999999;DP=4094;DP4=1596,2406,8,17;HOB=6.03792e-05;ICB=0.000121422;MQ=32;MQ0F=0.141426;MQB=0.67975;MQSB=1.3984e-09;RPB=0.156984;SGB=48.2527;VDB=0.139617;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R208H|443|LOC_Os12g19930|protein_coding|CODING|LOC_Os12g19930.1|3|1) FN3606-S.SNP.12:11615303 chr12:011615303 0 W/11615303-11615303 FN3606-S SNP C -> T AC=1;AN=190;BQB=0.942855;DP=2518;DP4=1033,1266,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0778396;MQB=0.380714;MQSB=1.93219e-33;RPB=0.0922746;SGB=35.4339;VDB=0.167636;EFF=INTRON(MODIFIER||||443|LOC_Os12g19930|protein_coding|CODING|LOC_Os12g19930.1|1|1) FN1728-S.SNP.12:11624642 chr12:011624642 0 W/11624642-11624642 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.969947;DP=2890;DP4=1400,1446,14,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000346021;MQB=1.63989e-09;MQSB=0.999001;RPB=0.977116;SGB=-61.9025;VDB=0.209278;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G242S|270|LOC_Os12g19950|protein_coding|CODING|LOC_Os12g19950.1|2|1) FN1746-S.SNP.12:11627402 chr12:011627402 0 W/11627402-11627402 FN1746-S SNP C -> G AC=1;AN=188;BQB=0.431728;DP=2144;DP4=1074,1026,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.0452425;MQB=0.997842;MQSB=0.13687;RPB=0.930959;SGB=7.0815;VDB=0.252995;EFF=INTRON(MODIFIER||||173|LOC_Os12g19970|protein_coding|CODING|LOC_Os12g19970.1|1|1) FN1472-S.SNP.12:11633054 chr12:011633054 0 W/11633054-11633054 FN1472-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g19980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN964-S.SNP.12:11635800 chr12:011635800 0 W/11635800-11635800 FN964-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g19980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 868, Mutant_ID: FN964-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4136-S.SNP.12:11642861 chr12:011642861 0 W/11642861-11642861 FN4136-S SNP C -> T AC=1;AN=170;BQB=0.794164;DP=2935;DP4=1361,1499,13,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.08987e-11;MQSB=0.834157;RPB=0.964783;SGB=87.856;VDB=0.829404;EFF=SPLICE_SITE_REGION(LOW||||732|LOC_Os12g20000|protein_coding|CODING|LOC_Os12g20000.1|2|1),INTRON(MODIFIER||||732|LOC_Os12g20000|protein_coding|CODING|LOC_Os12g20000.1|2|1) FN2292.SNP.12:11646194 chr12:011646194 0 W/11646194-11646194 FN2292 SNP C -> T AC=1;AN=192;BQB=0.872758;DP=5093;DP4=1840,2961,16,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.11153e-16;MQSB=0.0413315;RPB=0.838874;SGB=-7.43215;VDB=0.590766;EFF=INTERGENIC(MODIFIER||||||||||1) FN763-S.SNP.12:11647187 chr12:011647187 0 W/11647187-11647187 FN763-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g20020 retrotransposon protein, putative, unclassified, expressed SNo: 685, Mutant_ID: FN763-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2200-S.SNP.12:11647608 chr12:011647608 0 W/11647608-11647608 FN2200-S SNP G -> A AC=1;AN=190;BQB=0.89165;DP=4400;DP4=1953,2128,17,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.34139e-14;MQSB=0.715573;RPB=0.673677;SGB=27.4193;VDB=0.787417;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T354|512|LOC_Os12g20020|protein_coding|CODING|LOC_Os12g20020.1|4|1) FN-346.SNP.12:11648761 chr12:011648761 0 W/11648761-11648761 FN-346 Single Base Substitution G-A INTRON HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN1376-S.SNP.12:11648761 chr12:011648761 0 W/11648761-11648761 FN1376-S Single Base Substitution G-A INTRON HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN3355-S.SNP.12:11648761 chr12:011648761 0 W/11648761-11648761 FN3355-S SNP G -> A AC=2;AN=184;BQB=0.859967;DP=3598;DP4=1884,1571,25,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.31479e-22;MQSB=0.867542;RPB=0.809003;SGB=44.847;VDB=0.878644;EFF=INTRON(MODIFIER||||512|LOC_Os12g20020|protein_coding|CODING|LOC_Os12g20020.1|1|1) FN3631-S.SNP.12:11649732 chr12:011649732 0 W/11649732-11649732 FN3631-S SNP C -> T AC=1;AN=190;BQB=0.904233;DP=2981;DP4=1481,1393,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75599e-08;MQSB=0.996669;RPB=0.567572;SGB=36.1006;VDB=0.339187;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P212|284|LOC_Os12g20030|protein_coding|CODING|LOC_Os12g20030.1|2|1) FN1190-S.SNP.12:11650749 chr12:011650749 0 W/11650749-11650749 FN1190-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g20030 retrotransposon protein, putative, unclassified, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN2200-S.SNP.12:11656516 chr12:011656516 0 W/11656516-11656516 FN2200-S SNP G -> C AC=1;AN=190;BQB=0.999714;DP=4707;DP4=2170,2240,15,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021245;MQB=2.31768e-11;MQSB=0.940025;RPB=0.280314;SGB=75.1932;VDB=0.094933;EFF=INTRON(MODIFIER||||1019|LOC_Os12g20040|protein_coding|CODING|LOC_Os12g20040.1|3|1) FN3528-S.SNP.12:11657262 chr12:011657262 0 W/11657262-11657262 FN3528-S SNP C -> T AC=1;AN=188;BQB=0.916533;DP=3436;DP4=1803,1569,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56049e-13;MQSB=0.942194;RPB=0.87573;SGB=98.9552;VDB=0.445979;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R858C|1019|LOC_Os12g20040|protein_coding|CODING|LOC_Os12g20040.1|4|1) FN3285-S.SNP.12:11660349 chr12:011660349 0 W/11660349-11660349 FN3285-S SNP A -> G AC=1;AN=184;BQB=0.936723;DP=3109;DP4=1549,1416,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00128659;MQB=7.64789e-06;MQSB=0.567537;RPB=0.998755;SGB=44.2207;VDB=0.563265;EFF=INTRON(MODIFIER||||278|LOC_Os12g20050|protein_coding|CODING|LOC_Os12g20050.1|1|1) FN961-S.SNP.12:11667645 chr12:011667645 0 W/11667645-11667645 FN961-S Single Base Substitution A-G INTRON HOMO SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN1031-S.SNP.12:11668465 chr12:011668465 0 W/11668465-11668465 FN1031-S Single Base Substitution G-A INTRON HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN_786-4-1.SNP.12:11668559 chr12:011668559 0 W/11668559-11668559 FN_786-4-1 Single Base Substitution C-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3856-S.SNP.12:11668697 chr12:011668697 0 W/11668697-11668697 FN3856-S SNP T -> C AC=2;AN=158;BQB=0.834316;DP=3035;DP4=1615,1325,12,15;HOB=0.024996;ICB=0.493752;MQ=41;MQ0F=0.0135091;MQB=0.133778;MQSB=0.00834047;RPB=0.679796;SGB=112.609;VDB=0.174958;EFF=INTRON(MODIFIER||||1188|LOC_Os12g20060|protein_coding|CODING|LOC_Os12g20060.1|4|1) FN3391-S.SNP.12:11671600 chr12:011671600 0 W/11671600-11671600 FN3391-S SNP A -> G AC=1;AN=184;BQB=0.915764;DP=3131;DP4=1727,1214,12,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88207e-10;MQSB=0.935818;RPB=0.326575;SGB=35.884;VDB=0.362579;EFF=INTERGENIC(MODIFIER||||||||||1) FN2153-S.SNP.12:11674209 chr12:011674209 0 W/11674209-11674209 FN2153-S SNP G -> T AC=1;AN=168;BQB=0.49825;DP=4003;DP4=2174,1781,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.58391e-07;MQSB=0.985789;RPB=0.992978;SGB=2.75988;VDB=0.123351;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G371W|375|LOC_Os12g20070|protein_coding|CODING|LOC_Os12g20070.1|1|1) FN3563-S.SNP.12:11676679 chr12:011676679 0 W/11676679-11676679 FN3563-S SNP C -> T AC=1;AN=188;BQB=0.964557;DP=2585;DP4=1279,1234,13,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.16034e-10;MQSB=0.897954;RPB=0.688996;SGB=89.8686;VDB=0.103257;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.12:11677324 chr12:011677324 0 W/11677324-11677324 FN224-S Single Base Substitution G-C INTERGENIC HET SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN3438-S.SNP.12:11679951 chr12:011679951 0 W/11679951-11679951 FN3438-S SNP G -> T AC=1;AN=184;BQB=0.946834;DP=4276;DP4=1403,2692,9,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00374181;MQB=2.37503e-11;MQSB=0.000603528;RPB=0.900073;SGB=112.047;VDB=0.633077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1204-S.SNP.12:11684171 chr12:011684171 0 W/11684171-11684171 FN1204-S Single Base Substitution G-A INTERGENIC HET SNo: 1035, Mutant_ID: FN1204-S, Generation: M2, Mutations: 64, Genes: 85, Seed availability: Yes. FN_398-1.SNP.12:11685245 chr12:011685245 0 W/11685245-11685245 FN_398-1 Single Base Substitution C-G INTERGENIC HET SNo: 1369, Mutant_ID: FN_398-1, Generation: M2, Mutations: 46, Genes: 21, Seed availability: No. FN1339-S.SNP.12:11689428 chr12:011689428 0 W/11689428-11689428 FN1339-S Single Base Substitution C-G INTERGENIC HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN908-S.SNP.12:11691558 chr12:011691558 0 W/11691558-11691558 FN908-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN1590-S.SNP.12:11692276 chr12:011692276 0 W/11692276-11692276 FN1590-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os12g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN1614-S.SNP.12:11693410 chr12:011693410 0 W/11693410-11693410 FN1614-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os12g20110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1686-S.SNP.12:11694756 chr12:011694756 0 W/11694756-11694756 FN1686-S SNP G -> C AC=1;AN=188;BQB=0.0329706;DP=4038;DP4=2116,1879,17,14;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.077266;MQB=0.143422;MQSB=0.0284708;RPB=0.964634;SGB=-6.85034;VDB=0.860276;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaG/aaC|K1385N|1701|LOC_Os12g20110|protein_coding|CODING|LOC_Os12g20110.1|3|1) FN1269-S.SNP.12:11698176 chr12:011698176 0 W/11698176-11698176 FN1269-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2335.SNP.12:11698176 chr12:011698176 0 W/11698176-11698176 FN2335 SNP T -> C AC=1;AN=192;BQB=0.959484;DP=4859;DP4=2352,2210,22,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.25433e-17;MQSB=0.625221;RPB=0.797417;SGB=121.76;VDB=0.017118;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.12:11701135 chr12:011701135 0 W/11701135-11701135 FN3362-S SNP G -> A AC=1;AN=184;BQB=0.745944;DP=2923;DP4=1251,1547,6,11;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0.0444749;MQB=0.250761;MQSB=0;RPB=0.551037;SGB=49.835;VDB=0.245357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.12:11712069 chr12:011712069 0 W/11712069-11712069 FN4221-S SNP T -> C AC=1;AN=170;BQB=0.964746;DP=2929;DP4=1434,1394,9,6;HOB=6.92042e-05;ICB=0.000139222;MQ=31;MQ0F=0.0795493;MQB=0.871714;MQSB=0.00026225;RPB=0.982343;SGB=41.7633;VDB=0.45247;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.12:11713808 chr12:011713808 0 W/11713808-11713808 FN3371-S SNP G -> A AC=1;AN=184;BQB=0.994258;DP=3068;DP4=1555,1418,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.16681e-07;MQSB=0.00355017;RPB=0.136651;SGB=39.2697;VDB=0.0763256;EFF=INTERGENIC(MODIFIER||||||||||1) FN3371-S.SNP.12:11714196 chr12:011714196 0 W/11714196-11714196 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.837179;DP=2906;DP4=1242,1552,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11722e-10;MQSB=0.887997;RPB=0.936803;SGB=71.3514;VDB=0.263369;EFF=INTERGENIC(MODIFIER||||||||||1) FN911-S.SNP.12:11715819 chr12:011715819 0 W/11715819-11715819 FN911-S Single Base Substitution G-T INTERGENIC HET SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3050-S.SNP.12:11718671 chr12:011718671 0 W/11718671-11718671 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.997834;DP=2721;DP4=1340,1271,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.07982e-07;MQSB=0.944027;RPB=0.908288;SGB=-2.32838;VDB=0.797506;EFF=INTRON(MODIFIER||||97|LOC_Os12g20144|protein_coding|CODING|LOC_Os12g20144.1|4|1) FN3971-S.SNP.12:11719746 chr12:011719746 0 W/11719746-11719746 FN3971-S SNP T -> C AC=1;AN=168;BQB=0.901631;DP=2431;DP4=1220,1105,3,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000858099;MQSB=0.977234;RPB=0.483983;SGB=25.5891;VDB=0.829194;EFF=INTRON(MODIFIER||||97|LOC_Os12g20144|protein_coding|CODING|LOC_Os12g20144.1|6|1) FN2446.SNP.12:11722205 chr12:011722205 0 W/11722205-11722205 FN2446 SNP A -> G AC=1;AN=200;BQB=0.99975;DP=4885;DP4=2292,2303,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26213e-11;MQSB=0.914207;RPB=0.558192;SGB=37.3004;VDB=0.229504;EFF=INTRON(MODIFIER||||97|LOC_Os12g20144|protein_coding|CODING|LOC_Os12g20144.1|9|1) FN3707-S.SNP.12:11725372 chr12:011725372 0 W/11725372-11725372 FN3707-S SNP C -> T AC=1;AN=190;BQB=0.490063;DP=3109;DP4=1506,1459,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.05561e-07;MQSB=0.994296;RPB=0.980994;SGB=1.00337;VDB=0.0866194;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.12:11733740 chr12:011733740 0 W/11733740-11733740 FN389-S Single Base Substitution C-T INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2125-S.SNP.12:11733755 chr12:011733755 0 W/11733755-11733755 FN2125-S SNP G -> C AC=1;AN=168;BQB=0.0184886;DP=4198;DP4=2122,2023,20,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.70829e-15;MQSB=0.998475;RPB=0.999286;SGB=-368.863;VDB=0.795769;EFF=INTRON(MODIFIER||||1206|LOC_Os12g20150|protein_coding|CODING|LOC_Os12g20150.1|11|1),INTRON(MODIFIER||||728|LOC_Os12g20150|protein_coding|CODING|LOC_Os12g20150.2|11|1) FN1243-S.SNP.12:11750363 chr12:011750363 0 W/11750363-11750363 FN1243-S Single Base Substitution T-A INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN3659-S.SNP.12:11756978 chr12:011756978 0 W/11756978-11756978 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.576372;DP=2929;DP4=1413,1387,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.66682e-06;MQSB=0.874728;RPB=0.861551;SGB=36.1006;VDB=0.898497;EFF=INTRON(MODIFIER||||1167|LOC_Os12g20169|protein_coding|CODING|LOC_Os12g20169.1|4|1) FN2663-S.SNP.12:11760299 chr12:011760299 0 W/11760299-11760299 FN2663-S SNP A -> T AC=1;AN=200;BQB=0.997855;DP=5108;DP4=2564,2265,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.39727e-11;MQSB=0.778328;RPB=0.684469;SGB=-12.5051;VDB=0.0447043;EFF=INTERGENIC(MODIFIER||||||||||1) FN355-S.SNP.12:11760589 chr12:011760589 0 W/11760589-11760589 FN355-S Single Base Substitution C-T INTERGENIC HOMO SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN3455-S.SNP.12:11772232 chr12:011772232 0 W/11772232-11772232 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.95346;DP=2787;DP4=1075,1617,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.69226e-07;MQSB=0.976739;RPB=0.921862;SGB=44.2207;VDB=0.222794;EFF=INTERGENIC(MODIFIER||||||||||1) FN2172-S.SNP.12:11776427 chr12:011776427 0 W/11776427-11776427 FN2172-S SNP G -> A AC=1;AN=168;BQB=0.573715;DP=3401;DP4=1746,1613,13,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.1972e-11;MQSB=0.999612;RPB=0.819605;SGB=-14.0801;VDB=0.184487;EFF=INTERGENIC(MODIFIER||||||||||1) FN-308.SNP.12:11778522 chr12:011778522 0 W/11778522-11778522 FN-308 Single Base Substitution A-C INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2093-S.SNP.12:11780402 chr12:011780402 0 W/11780402-11780402 FN2093-S SNP C -> T AC=1;AN=168;BQB=0.109334;DP=2907;DP4=1258,1607,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.70391e-07;MQSB=0.686648;RPB=0.694839;SGB=-72.7757;VDB=0.795323;EFF=INTERGENIC(MODIFIER||||||||||1) FN622-S.SNP.12:11782325 chr12:011782325 0 W/11782325-11782325 FN622-S Single Base Substitution A-T INTERGENIC HOMO SNo: 587, Mutant_ID: FN622-S, Generation: M2, Mutations: 66, Genes: 31, Seed availability: Yes. FN3787-S.SNP.12:11782470 chr12:011782470 0 W/11782470-11782470 FN3787-S SNP G -> C AC=1;AN=190;BQB=0.96429;DP=2939;DP4=1535,1307,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000340252;MQB=1.90882e-05;MQSB=0.945785;RPB=0.95875;SGB=39.9877;VDB=0.453492;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.12:11784357 chr12:011784357 0 W/11784357-11784357 FN4300-S SNP T -> C AC=2;AN=170;BQB=0.89091;DP=2585;DP4=1259,1243,8,9;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.14877e-10;MQSB=0.68286;RPB=0.85257;SGB=48.6486;VDB=0.438217;EFF=INTRON(MODIFIER||||1379|LOC_Os12g20210|protein_coding|CODING|LOC_Os12g20210.1|4|1) FN2428.SNP.12:11792517 chr12:011792517 0 W/11792517-11792517 FN2428 SNP G -> A AC=1;AN=200;BQB=0.944332;DP=3382;DP4=1524,1420,6,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.78138e-08;MQSB=0.883037;RPB=0.943527;SGB=40.2696;VDB=0.83284;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.12:11796995 chr12:011796995 0 W/11796995-11796995 FN239-S Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN-298.SNP.12:11798988 chr12:011798988 0 W/11798988-11798988 FN-298 Single Base Substitution G-T INTRON HET SNo: 293, Mutant_ID: FN-298, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN739-S.SNP.12:11800489 chr12:011800489 0 W/11800489-11800489 FN739-S Single Base Substitution C-T INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN-110.SNP.12:11802849 chr12:011802849 0 W/11802849-11802849 FN-110 Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g20240 retrotransposon protein, putative, unclassified, expressed SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3523-S.SNP.12:11804931 chr12:011804931 0 W/11804931-11804931 FN3523-S SNP T -> A AC=1;AN=188;BQB=0.997802;DP=2965;DP4=1287,1543,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0148398;MQB=0.00104139;MQSB=0.128934;RPB=0.041484;SGB=43.0708;VDB=0.0383768;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K1007M|1883|LOC_Os12g20240|protein_coding|CODING|LOC_Os12g20240.1|3|1) FN929-S.SNP.12:11808381 chr12:011808381 0 W/11808381-11808381 FN929-S Single Base Substitution G-C INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2449.SNP.12:11812032 chr12:011812032 0 W/11812032-11812032 FN2449 SNP C -> G AC=2;AN=200;BQB=0.778812;DP=4775;DP4=2321,2195,12,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.45573e-13;MQSB=0.54863;RPB=0.919798;SGB=137.158;VDB=0.966874;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aGt|T748S|1177|LOC_Os12g20250|protein_coding|CODING|LOC_Os12g20250.1|2|1) FN1002-S.SNP.12:11815042 chr12:011815042 0 W/11815042-11815042 FN1002-S Single Base Substitution G-T INTERGENIC HOMO SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN425-S.SNP.12:11822134 chr12:011822134 0 W/11822134-11822134 FN425-S Single Base Substitution C-T INTRON HOMO SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN2423.SNP.12:11836269 chr12:011836269 0 W/11836269-11836269 FN2423 SNP T -> C AC=1;AN=200;BQB=0.576483;DP=5101;DP4=2365,2239,12,17;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.0119584;MQB=2.94443e-05;MQSB=0.00351637;RPB=0.318596;SGB=27.1468;VDB=0.106832;EFF=INTERGENIC(MODIFIER||||||||||1) FN3388-S.SNP.12:11839765 chr12:011839765 0 W/11839765-11839765 FN3388-S SNP T -> C AC=1;AN=184;BQB=0.839126;DP=3481;DP4=1732,1475,9,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000287274;MQB=1.28935e-09;MQSB=0.583967;RPB=0.272871;SGB=9.8459;VDB=0.223472;EFF=INTERGENIC(MODIFIER||||||||||1) FN1401-S.SNP.12:11842498 chr12:011842498 0 W/11842498-11842498 FN1401-S Single Base Substitution A-C INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN3471-S.SNP.12:11847516 chr12:011847516 0 W/11847516-11847516 FN3471-S SNP A -> T AC=1;AN=184;BQB=0.221063;DP=3276;DP4=1554,1443,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.62854e-08;MQSB=0.999918;RPB=0.917812;SGB=-38.1432;VDB=0.628698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2734-S.SNP.12:11849362 chr12:011849362 0 W/11849362-11849362 FN2734-S SNP T -> C AC=1;AN=200;BQB=0.986688;DP=3895;DP4=1735,1832,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000256739;MQB=6.3558e-08;MQSB=0.954272;RPB=0.848147;SGB=1.46408;VDB=0.304231;EFF=INTERGENIC(MODIFIER||||||||||1) FN2537-S.SNP.12:11854064 chr12:011854064 0 W/11854064-11854064 FN2537-S SNP T -> A AC=2;AN=198;BQB=0.653519;DP=3710;DP4=1882,1479,14,12;HOB=0.019998;ICB=0.495001;MQ=31;MQ0F=0.108625;MQB=0.62534;MQSB=2.10636e-11;RPB=0.490108;SGB=22.1104;VDB=0.652556;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R1296|1564|LOC_Os12g20300|protein_coding|CODING|LOC_Os12g20300.1|8|1) FN-226.SNP.12:11855098 chr12:011855098 0 W/11855098-11855098 FN-226 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN2297.SNP.12:11857084 chr12:011857084 0 W/11857084-11857084 FN2297 SNP G -> A AC=1;AN=192;BQB=0.582966;DP=4558;DP4=2210,2104,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.81777e-08;MQSB=0.713074;RPB=0.860511;SGB=76.5965;VDB=0.502856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A443V|1564|LOC_Os12g20300|protein_coding|CODING|LOC_Os12g20300.1|4|1) FN3442-S.SNP.12:11858958 chr12:011858958 0 W/11858958-11858958 FN3442-S SNP C -> T AC=1;AN=184;BQB=0.999423;DP=3752;DP4=1703,1939,3,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.83406e-07;MQSB=0.993597;RPB=0.89338;SGB=48.7425;VDB=0.817036;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGa/gAa|G79E|1564|LOC_Os12g20300|protein_coding|CODING|LOC_Os12g20300.1|1|1) FN2266-S.SNP.12:11859323 chr12:011859323 0 W/11859323-11859323 FN2266-S SNP T -> A AC=2;AN=190;BQB=0.90353;DP=3848;DP4=1545,1698,19,18;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000519751;MQB=1.8221e-15;MQSB=0.337402;RPB=0.0720496;SGB=121.394;VDB=0.0424982;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.12:11863417 chr12:011863417 0 W/11863417-11863417 FN1477-S Single Base Substitution A-T INTRON HET SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. W138-2-1.SNP.12:11865316 chr12:011865316 0 W/11865316-11865316 W138-2-1 Single Base Substitution T-C INTRON HET SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN-187.SNP.12:11868467 chr12:011868467 0 W/11868467-11868467 FN-187 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g20324 cyclin-A1, putative, expressed SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-187.SNP.12:11868468 chr12:011868468 0 W/11868468-11868468 FN-187 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g20324 cyclin-A1, putative, expressed SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN3438-S.SNP.12:11870916 chr12:011870916 0 W/11870916-11870916 FN3438-S SNP T -> C AC=1;AN=184;BQB=0.650901;DP=5504;DP4=2427,2918,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000181686;MQB=2.12546e-08;MQSB=0.368399;RPB=0.240067;SGB=49.835;VDB=0.87711;EFF=INTRON(MODIFIER||||491|LOC_Os12g20324|protein_coding|CODING|LOC_Os12g20324.1|1|1),INTRON(MODIFIER||||345|LOC_Os12g20324|protein_coding|CODING|LOC_Os12g20324.2|1|1),INTRON(MODIFIER||||345|LOC_Os12g20324|protein_coding|CODING|LOC_Os12g20324.3|1|1) FN907-S.SNP.12:11887782 chr12:011887782 0 W/11887782-11887782 FN907-S Single Base Substitution A-T INTERGENIC HET SNo: 813, Mutant_ID: FN907-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1430-S.SNP.12:11888574 chr12:011888574 0 W/11888574-11888574 FN1430-S Single Base Substitution G-C INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4128-S.SNP.12:11888574 chr12:011888574 0 W/11888574-11888574 FN4128-S SNP G -> C AC=1;AN=182;BQB=0.944102;DP=2496;DP4=1109,1252,4,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.11002e-06;MQSB=0.48855;RPB=0.929843;SGB=32.1169;VDB=0.787081;EFF=INTERGENIC(MODIFIER||||||||||1) FN912-S.SNP.12:11888574 chr12:011888574 0 W/11888574-11888574 FN912-S Single Base Substitution G-C INTERGENIC HET SNo: 818, Mutant_ID: FN912-S, Generation: M2, Mutations: 69, Genes: 106, Seed availability: Yes. FN3559-S.SNP.12:11889645 chr12:011889645 0 W/11889645-11889645 FN3559-S SNP C -> A AC=1;AN=188;BQB=0.995459;DP=4041;DP4=2150,1781,20,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.97534e-17;MQSB=0.999838;RPB=0.984049;SGB=103.307;VDB=0.937306;EFF=INTRON(MODIFIER||||65|LOC_Os12g20360|protein_coding|CODING|LOC_Os12g20360.1|1|1) FN1413-S.SNP.12:11895991 chr12:011895991 0 W/11895991-11895991 FN1413-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN522-S.SNP.12:11900711 chr12:011900711 0 W/11900711-11900711 FN522-S Single Base Substitution G-A INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN4022-S.SNP.12:11909525 chr12:011909525 0 W/11909525-11909525 FN4022-S SNP T -> A AC=1;AN=168;BQB=0.92615;DP=2602;DP4=1364,1160,6,4;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.000768639;MQB=0.126055;MQSB=0.00708231;RPB=0.908084;SGB=24.4556;VDB=0.549935;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.12:11912859 chr12:011912859 0 W/11912859-11912859 FN2318 SNP A -> G AC=1;AN=192;BQB=0.621251;DP=4717;DP4=2333,2177,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00720797;MQB=6.72108e-08;MQSB=0.710646;RPB=0.964099;SGB=103.983;VDB=0.26945;EFF=INTERGENIC(MODIFIER||||||||||1) FN-315.SNP.12:11919127 chr12:011919127 0 W/11919127-11919127 FN-315 Single Base Substitution C-T INTERGENIC HET SNo: 310, Mutant_ID: FN-315, Generation: M2, Mutations: 44, Genes: 273, Seed availability: Yes. FN1758-S.SNP.12:11936786 chr12:011936786 0 W/11936786-11936786 FN1758-S SNP A -> T AC=1;AN=188;BQB=0.954913;DP=1762;DP4=1070,640,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.91777e-08;MQSB=0.997104;RPB=0.413615;SGB=39.5276;VDB=0.841368;EFF=INTERGENIC(MODIFIER||||||||||1) FN484-S.SNP.12:11937625 chr12:011937625 0 W/11937625-11937625 FN484-S Single Base Substitution C-T INTERGENIC HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN1554-S.SNP.12:11938861 chr12:011938861 0 W/11938861-11938861 FN1554-S Single Base Substitution G-A INTERGENIC HET SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN532-S.SNP.12:11939541 chr12:011939541 0 W/11939541-11939541 FN532-S Single Base Substitution C-T INTERGENIC HET SNo: 529, Mutant_ID: FN532-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: No. FN3890-S.SNP.12:11942634 chr12:011942634 0 W/11942634-11942634 FN3890-S SNP C -> T AC=2;AN=158;BQB=0.999974;DP=2501;DP4=1309,1098,25,16;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.48301e-20;MQSB=0.408662;RPB=0.25836;SGB=173.781;VDB=0.552093;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V398M|1113|LOC_Os12g20450|protein_coding|CODING|LOC_Os12g20450.1|2|1) FN760-S.SNP.12:11942789 chr12:011942789 0 W/11942789-11942789 FN760-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g20450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN2593-S.SNP.12:11947655 chr12:011947655 0 W/11947655-11947655 FN2593-S SNP G -> A AC=2;AN=198;BQB=0.999992;DP=3911;DP4=1804,1800,25,35;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.74741e-34;MQSB=0.906852;RPB=0.763751;SGB=264.529;VDB=0.76616;EFF=INTRON(MODIFIER||||244|LOC_Os12g20460|protein_coding|CODING|LOC_Os12g20460.1|1|1) FN1375-S.SNP.12:11949264 chr12:011949264 0 W/11949264-11949264 FN1375-S Single Base Substitution G-T INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN820-S.SNP.12:11949514 chr12:011949514 0 W/11949514-11949514 FN820-S Single Base Substitution C-T INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN2447.SNP.12:11951427 chr12:011951427 0 W/11951427-11951427 FN2447 SNP G -> T AC=1;AN=200;BQB=0.486325;DP=4904;DP4=2100,2537,17,11;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00224307;MQB=7.73027e-05;MQSB=0.417048;RPB=0.649629;SGB=-7.05853;VDB=0.0673485;EFF=INTERGENIC(MODIFIER||||||||||1) FN3416-S.SNP.12:11953115 chr12:011953115 0 W/11953115-11953115 FN3416-S SNP C -> G AC=1;AN=184;BQB=0.972082;DP=4132;DP4=2071,1979,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88549e-06;MQSB=0.688522;RPB=0.729474;SGB=39.699;VDB=0.543077;EFF=INTERGENIC(MODIFIER||||||||||1) FN1680-S.SNP.12:11954397 chr12:011954397 0 W/11954397-11954397 FN1680-S SNP A -> T AC=2;AN=188;BQB=0.0385064;DP=3033;DP4=1640,1316,27,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.97923e-20;MQSB=0.940618;RPB=0.974083;SGB=-19.94;VDB=0.558861;EFF=INTERGENIC(MODIFIER||||||||||1) FN3560-S.SNP.12:11954840 chr12:011954840 0 W/11954840-11954840 FN3560-S SNP T -> A AC=1;AN=188;BQB=0.0471911;DP=3015;DP4=1186,1655,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.0053068;MQB=0.0119134;MQSB=9.85202e-39;RPB=0.633171;SGB=-16.6296;VDB=0.548574;EFF=INTERGENIC(MODIFIER||||||||||1) FN4130-S.SNP.12:11958288 chr12:011958288 0 W/11958288-11958288 FN4130-S SNP A -> T AC=1;AN=182;BQB=0.984877;DP=3021;DP4=1542,1400,6,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.17366e-05;MQSB=0.554325;RPB=0.909729;SGB=30.5793;VDB=0.50952;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.12:11958298 chr12:011958298 0 W/11958298-11958298 FN1667-S SNP G -> T AC=1;AN=188;BQB=0.874758;DP=2500;DP4=1241,1230,13,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=5.4275e-08;MQSB=0.219248;RPB=0.77557;SGB=7.0815;VDB=0.485996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.12:11958299 chr12:011958299 0 W/11958299-11958299 FN1667-S SNP T -> A AC=1;AN=188;BQB=0.998263;DP=2492;DP4=1247,1219,12,4;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=2.59053e-07;MQSB=0.210914;RPB=0.645701;SGB=26.0762;VDB=0.182473;EFF=INTERGENIC(MODIFIER||||||||||1) FN1186-S.SNP.12:11963502 chr12:011963502 0 W/11963502-11963502 FN1186-S Single Base Substitution C-T INTRON HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN2302.SNP.12:11966458 chr12:011966458 0 W/11966458-11966458 FN2302 SNP G -> A AC=1;AN=192;BQB=0.000160056;DP=6834;DP4=4307,1764,21,40;HOB=5.42535e-05;ICB=0.000109072;MQ=14;MQ0F=0.221393;MQB=0.183988;MQSB=3.57652e-27;RPB=0.868682;SGB=-1759.47;VDB=0.998237;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.12:11973232 chr12:011973232 0 W/11973232-11973232 FN2753-S SNP G -> T AC=1;AN=200;BQB=0.239126;DP=4026;DP4=1729,1807,9,3;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0834575;MQB=0.971095;MQSB=0.550125;RPB=0.559368;SGB=33.0593;VDB=0.0706833;EFF=INTERGENIC(MODIFIER||||||||||1) FN-96.SNP.12:11979149 chr12:011979149 0 W/11979149-11979149 FN-96 Single Base Substitution A-G INTERGENIC HET SNo: 96, Mutant_ID: FN-96, Generation: M2, Mutations: 32, Genes: 6, Seed availability: Yes. FN487-S.SNP.12:11981018 chr12:011981018 0 W/11981018-11981018 FN487-S Single Base Substitution C-G INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN2302.SNP.12:11981891 chr12:011981891 0 W/11981891-11981891 FN2302 SNP G -> A AC=1;AN=192;BQB=0.00414931;DP=10737;DP4=4708,4678,13,23;HOB=5.42535e-05;ICB=0.000109072;MQ=34;MQ0F=0.0420043;MQB=0.865106;MQSB=0;RPB=0.750827;SGB=-125.159;VDB=0.890873;EFF=INTERGENIC(MODIFIER||||||||||1) W470-2-1.SNP.12:11983875 chr12:011983875 0 W/11983875-11983875 W470-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN1301-S.SNP.12:12015318 chr12:012015318 0 W/12015318-12015318 FN1301-S Single Base Substitution T-G INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1505-S.SNP.12:12033303 chr12:012033303 0 W/12033303-12033303 FN1505-S Single Base Substitution A-T INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. W706-3-1.SNP.12:12062291 chr12:012062291 0 W/12062291-12062291 W706-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2349.SNP.12:12067448 chr12:012067448 0 W/12067448-12067448 FN2349 SNP G -> A AC=2;AN=192;BQB=0.21941;DP=4428;DP4=1986,2154,27,20;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000225836;MQB=5.03299e-20;MQSB=0.990578;RPB=0.225282;SGB=105.844;VDB=0.859978;EFF=INTRON(MODIFIER||||209|LOC_Os12g21490|protein_coding|CODING|LOC_Os12g21490.1|1|1) FN2157-S.SNP.12:12068187 chr12:012068187 0 W/12068187-12068187 FN2157-S SNP G -> A AC=1;AN=168;BQB=0.0342392;DP=3036;DP4=1556,1417,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.23594e-06;MQSB=0.989887;RPB=0.924039;SGB=8.48315;VDB=0.968383;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D5|209|LOC_Os12g21490|protein_coding|CODING|LOC_Os12g21490.1|1|1) FN573-S.SNP.12:12072452 chr12:012072452 0 W/12072452-12072452 FN573-S Single Base Substitution A-G INTERGENIC HET SNo: 563, Mutant_ID: FN573-S, Generation: M2, Mutations: 54, Genes: 19, Seed availability: Yes. FN3554-S.SNP.12:12075798 chr12:012075798 0 W/12075798-12075798 FN3554-S SNP G -> A AC=1;AN=188;BQB=0.974113;DP=1178;DP4=707,438,3,3;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.00270699;MQSB=0.000987719;RPB=0.906667;SGB=21.722;VDB=0.917952;EFF=INTRON(MODIFIER||||284|LOC_Os12g21500|protein_coding|CODING|LOC_Os12g21500.1|3|1) FN2146-S.SNP.12:12091676 chr12:012091676 0 W/12091676-12091676 FN2146-S SNP T -> A AC=2;AN=168;BQB=0.323699;DP=2410;DP4=975,1370,17,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.14791e-15;MQSB=0.97014;RPB=0.362047;SGB=-90.0367;VDB=0.881857;EFF=INTERGENIC(MODIFIER||||||||||1) FN2608-S.SNP.12:12099665 chr12:012099665 0 W/12099665-12099665 FN2608-S SNP T -> A AC=1;AN=198;BQB=0.924567;DP=4091;DP4=1978,1900,6,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.0192668;MQSB=0.497034;RPB=0.728001;SGB=1.37381;VDB=0.734744;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Tgg|R353W|1307|LOC_Os12g21510|protein_coding|CODING|LOC_Os12g21510.1|1|1) FN2667-S.SNP.12:12101219 chr12:012101219 0 W/12101219-12101219 FN2667-S SNP G -> A AC=1;AN=200;BQB=0.716217;DP=4319;DP4=1997,2043,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.9605e-11;MQSB=0.723064;RPB=0.655163;SGB=72.6852;VDB=0.0620431;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.12:12101945 chr12:012101945 0 W/12101945-12101945 FN3966-S SNP G -> C AC=1;AN=168;BQB=0.998614;DP=2501;DP4=1260,1126,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.39271e-06;MQSB=0.995078;RPB=0.933003;SGB=31.3172;VDB=0.092441;EFF=INTERGENIC(MODIFIER||||||||||1) FN915-S.SNP.12:12105767 chr12:012105767 0 W/12105767-12105767 FN915-S Single Base Substitution T-A INTRON HET SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN3950-S.SNP.12:12106551 chr12:012106551 0 W/12106551-12106551 FN3950-S SNP A -> T AC=2;AN=168;BQB=0.79313;DP=2744;DP4=1075,1437,11,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.83896e-12;MQSB=0.885039;RPB=0.288796;SGB=53.7853;VDB=0.406369;EFF=INTERGENIC(MODIFIER||||||||||1) FN3699-S.SNP.12:12112229 chr12:012112229 0 W/12112229-12112229 FN3699-S SNP A -> T AC=2;AN=190;BQB=0.9579;DP=3235;DP4=1421,1688,20,31;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.80546e-24;MQSB=0.000511366;RPB=0.5787;SGB=131.097;VDB=0.0795114;EFF=INTERGENIC(MODIFIER||||||||||1) FN1230-S.SNP.12:12114547 chr12:012114547 0 W/12114547-12114547 FN1230-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1055, Mutant_ID: FN1230-S, Generation: M2, Mutations: 61, Genes: 11, Seed availability: Yes. W500-4-7-1.SNP.12:12115631 chr12:012115631 0 W/12115631-12115631 W500-4-7-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN-350.SNP.12:12115950 chr12:012115950 0 W/12115950-12115950 FN-350 Single Base Substitution C-T STOP_GAINED HET LOC_Os12g21550 retrotransposon protein, putative, unclassified, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN3530-S.SNP.12:12120005 chr12:012120005 0 W/12120005-12120005 FN3530-S SNP C -> T AC=1;AN=188;BQB=0.313943;DP=2824;DP4=1315,1429,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.79711e-08;MQSB=0.985311;RPB=0.492452;SGB=67.1521;VDB=0.82696;EFF=INTRON(MODIFIER||||601|LOC_Os12g21560|protein_coding|CODING|LOC_Os12g21560.1|3|1) FN2752-S.SNP.12:12126480 chr12:012126480 0 W/12126480-12126480 FN2752-S SNP T -> A AC=1;AN=200;BQB=0.94147;DP=4726;DP4=2218,2280,21,7;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0048667;MQB=1.7045e-10;MQSB=0.696823;RPB=0.74785;SGB=-235.26;VDB=0.0861122;EFF=INTRON(MODIFIER||||281|LOC_Os12g21570|protein_coding|CODING|LOC_Os12g21570.1|1|1) FN2560-S.SNP.12:12131972 chr12:012131972 0 W/12131972-12131972 FN2560-S SNP G -> A AC=1;AN=198;BQB=0.964765;DP=4169;DP4=2008,1911,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000479731;MQB=3.19472e-06;MQSB=0.182266;RPB=0.625346;SGB=36.5539;VDB=0.48343;EFF=INTERGENIC(MODIFIER||||||||||1) FN3965-S.SNP.12:12140437 chr12:012140437 0 W/12140437-12140437 FN3965-S SNP C -> G AC=1;AN=168;BQB=0.996272;DP=3151;DP4=1726,1323,12,13;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=1.25212e-12;MQSB=0.0365234;RPB=0.946613;SGB=75.9177;VDB=0.459233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q297E|600|LOC_Os12g21600|protein_coding|CODING|LOC_Os12g21600.1|5|1) FN973-S.SNP.12:12145588 chr12:012145588 0 W/12145588-12145588 FN973-S Single Base Substitution C-A INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN2780-S.SNP.12:12148017 chr12:012148017 0 W/12148017-12148017 FN2780-S SNP C -> A AC=1;AN=198;BQB=0.0498189;DP=3492;DP4=1692,1389,14,8;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=2.11578e-06;MQSB=0.00060141;RPB=0.96867;SGB=68.91;VDB=0.388148;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gAg|A80E|124|LOC_Os12g21610|protein_coding|CODING|LOC_Os12g21610.1|1|1) FN430-S.SNP.12:12153482 chr12:012153482 0 W/12153482-12153482 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g21624 retrotransposon protein, putative, unclassified, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN430-S.SNP.12:12153483 chr12:012153483 0 W/12153483-12153483 FN430-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g21624 retrotransposon protein, putative, unclassified, expressed SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN1003-S.SNP.12:12156854 chr12:012156854 0 W/12156854-12156854 FN1003-S Single Base Substitution A-T INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN1003-S.SNP.12:12156858 chr12:012156858 0 W/12156858-12156858 FN1003-S Single Base Substitution C-T INTERGENIC HET SNo: 906, Mutant_ID: FN1003-S, Generation: M2, Mutations: 39, Genes: 43, Seed availability: Yes. FN3804-S.SNP.12:12160495 chr12:012160495 0 W/12160495-12160495 FN3804-S SNP T -> A AC=2;AN=190;BQB=0.764965;DP=3457;DP4=1627,1578,23,14;HOB=0.020831;ICB=0.494793;MQ=25;MQ0F=0.231415;MQB=0.0622736;MQSB=0;RPB=0.485903;SGB=79.845;VDB=0.890183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K517M|1516|LOC_Os12g21640|protein_coding|CODING|LOC_Os12g21640.1|1|1) FN2659-S.SNP.12:12166233 chr12:012166233 0 W/12166233-12166233 FN2659-S SNP T -> G AC=1;AN=200;BQB=0.85824;DP=4959;DP4=2483,2266,7,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.13738e-12;MQSB=0.947393;RPB=0.88487;SGB=54.6902;VDB=0.245978;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.12:12166235 chr12:012166235 0 W/12166235-12166235 FN2659-S SNP A -> C AC=1;AN=200;BQB=0.905039;DP=4922;DP4=2432,2241,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.96727e-12;MQSB=0.984609;RPB=0.873324;SGB=86.5007;VDB=0.138433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2219-S.SNP.12:12168040 chr12:012168040 0 W/12168040-12168040 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.135236;DP=4931;DP4=2247,2103,7,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03037e-10;MQSB=0.0246566;RPB=0.774516;SGB=-11.0065;VDB=0.711712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2431.SNP.12:12170963 chr12:012170963 0 W/12170963-12170963 FN2431 SNP A -> T AC=2;AN=200;BQB=0.994731;DP=5137;DP4=2048,2230,10,12;HOB=0.0198;ICB=0.495051;MQ=45;MQ0F=0;MQB=1.79884e-12;MQSB=0.0148541;RPB=0.980971;SGB=95.7111;VDB=0.0983231;EFF=INTERGENIC(MODIFIER||||||||||1) FN3506-S.SNP.12:12170963 chr12:012170963 0 W/12170963-12170963 FN3506-S SNP A -> T AC=2;AN=188;BQB=0.976442;DP=2515;DP4=1240,882,8,7;HOB=0.0210502;ICB=0.494738;MQ=45;MQ0F=0;MQB=1.3103e-07;MQSB=3.12109e-05;RPB=0.59008;SGB=62.6088;VDB=0.491425;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-169-1.SNP.12:12170963 chr12:012170963 0 W/12170963-12170963 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN3417-S.SNP.12:12173098 chr12:012173098 0 W/12173098-12173098 FN3417-S SNP A -> G AC=2;AN=184;BQB=0.999274;DP=3045;DP4=1682,1280,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.4751e-21;MQSB=0.996911;RPB=0.921856;SGB=113.227;VDB=0.321242;EFF=INTERGENIC(MODIFIER||||||||||1) FN3930-S.SNP.12:12175192 chr12:012175192 0 W/12175192-12175192 FN3930-S SNP C -> T AC=1;AN=158;BQB=0.873144;DP=2741;DP4=1425,1207,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.42303e-07;MQSB=0.99568;RPB=0.620032;SGB=55.806;VDB=0.863595;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y290|799|LOC_Os12g21660|protein_coding|CODING|LOC_Os12g21660.1|3|1) FN1693-S.SNP.12:12175371 chr12:012175371 0 W/12175371-12175371 FN1693-S SNP C -> T AC=2;AN=188;BQB=0.775046;DP=1920;DP4=1114,749,16,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.4115e-11;MQSB=0.921804;RPB=0.997597;SGB=46.4225;VDB=0.957512;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P350L|799|LOC_Os12g21660|protein_coding|CODING|LOC_Os12g21660.1|3|1) FN3370-S.SNP.12:12176268 chr12:012176268 0 W/12176268-12176268 FN3370-S SNP A -> T AC=2;AN=184;BQB=0.976144;DP=3301;DP4=1498,1602,17,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.25055e-19;MQSB=0.983181;RPB=0.646086;SGB=78.7544;VDB=0.695343;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K619I|799|LOC_Os12g21660|protein_coding|CODING|LOC_Os12g21660.1|4|1) FN2122-S.SNP.12:12180926 chr12:012180926 0 W/12180926-12180926 FN2122-S SNP G -> C AC=1;AN=168;BQB=0.855796;DP=2593;DP4=1585,945,11,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.2872e-08;MQSB=0.997813;RPB=0.962061;SGB=27.0464;VDB=0.179338;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cGt|P130R|385|LOC_Os12g21680|protein_coding|CODING|LOC_Os12g21680.1|4|1) FN449-S.SNP.12:12181699 chr12:012181699 0 W/12181699-12181699 FN449-S Single Base Substitution G-T INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN449-S.SNP.12:12181700 chr12:012181700 0 W/12181700-12181700 FN449-S Single Base Substitution C-T INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN735-S.SNP.12:12191947 chr12:012191947 0 W/12191947-12191947 FN735-S Single Base Substitution T-C INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN866-S.SNP.12:12200286 chr12:012200286 0 W/12200286-12200286 FN866-S Single Base Substitution C-G INTRON HET SNo: 772, Mutant_ID: FN866-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: No. FN2426.SNP.12:12214269 chr12:012214269 0 W/12214269-12214269 FN2426 SNP T -> C AC=1;AN=200;BQB=0.86704;DP=3656;DP4=1565,1374,14,8;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0103939;MQB=0.314976;MQSB=0.000256335;RPB=0.878884;SGB=15.9106;VDB=0.624047;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V463A|510|LOC_Os12g21720|protein_coding|CODING|LOC_Os12g21720.1|1|1) FN3997-S.SNP.12:12217741 chr12:012217741 0 W/12217741-12217741 FN3997-S SNP C -> T AC=1;AN=168;BQB=0.994304;DP=2462;DP4=1182,1195,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00812348;MQB=0.0343904;MQSB=0.000111475;RPB=0.888516;SGB=34.4498;VDB=0.160384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G893S|1793|LOC_Os12g21730|protein_coding|CODING|LOC_Os12g21730.1|5|1) FN-106.SNP.12:12219729 chr12:012219729 0 W/12219729-12219729 FN-106 Single Base Substitution G-A INTRON HOMO SNo: 106, Mutant_ID: FN-106, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN3541-S.SNP.12:12223677 chr12:012223677 0 W/12223677-12223677 FN3541-S SNP C -> A AC=1;AN=188;BQB=0.992357;DP=2456;DP4=714,1605,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000384515;MQSB=0.931244;RPB=0.998411;SGB=30.8063;VDB=0.648709;EFF=START_GAINED(LOW||||84|LOC_Os12g21734|protein_coding|CODING|LOC_Os12g21734.1|1|1),UTR_5_PRIME(MODIFIER||913||84|LOC_Os12g21734|protein_coding|CODING|LOC_Os12g21734.1|1|1) FN3511-S.SNP.12:12223841 chr12:012223841 0 W/12223841-12223841 FN3511-S SNP A -> G AC=1;AN=188;BQB=0.81339;DP=3145;DP4=1501,1483,7,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.18945e-05;MQSB=0.997856;RPB=0.794813;SGB=-3.72151;VDB=0.991347;EFF=INTERGENIC(MODIFIER||||||||||1) FN2177-S.SNP.12:12225040 chr12:012225040 0 W/12225040-12225040 FN2177-S SNP C -> T AC=1;AN=168;BQB=0.0340482;DP=3654;DP4=1792,1814,10,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.51381e-08;MQSB=0.999923;RPB=0.83933;SGB=-13.6493;VDB=0.781172;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.12:12231159 chr12:012231159 0 W/12231159-12231159 FN-111 Single Base Substitution T-A INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN882-S.SNP.12:12232931 chr12:012232931 0 W/12232931-12232931 FN882-S Single Base Substitution G-A INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN1228-S.SNP.12:12234861 chr12:012234861 0 W/12234861-12234861 FN1228-S Single Base Substitution G-A INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN3452-S.SNP.12:12237346 chr12:012237346 0 W/12237346-12237346 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.925524;DP=3383;DP4=1577,1703,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.00147798;MQB=0.999166;MQSB=0.000230264;RPB=0.744866;SGB=39.699;VDB=0.170536;EFF=INTRON(MODIFIER||||50|LOC_Os12g21750|protein_coding|CODING|LOC_Os12g21750.1|1|1) FN3831-S.SNP.12:12241736 chr12:012241736 0 W/12241736-12241736 FN3831-S SNP C -> G AC=1;AN=190;BQB=0.805286;DP=2693;DP4=1390,1209,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81862e-09;MQSB=0.999973;RPB=0.779148;SGB=31.3213;VDB=0.331829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2220-S.SNP.12:12243289 chr12:012243289 0 W/12243289-12243289 FN2220-S SNP C -> T AC=1;AN=190;BQB=0.78653;DP=5048;DP4=2369,2332,26,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.05473e-19;MQSB=0.709678;RPB=0.447436;SGB=35.1887;VDB=0.977827;EFF=INTERGENIC(MODIFIER||||||||||1) FN2122-S.SNP.12:12248967 chr12:012248967 0 W/12248967-12248967 FN2122-S SNP G -> A AC=1;AN=168;BQB=0.859405;DP=3462;DP4=1887,1523,5,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.24783e-07;MQSB=0.999264;RPB=0.992515;SGB=38.1788;VDB=0.798635;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R441Q|595|LOC_Os12g21770|protein_coding|CODING|LOC_Os12g21770.1|4|1) FN629-S.SNP.12:12250622 chr12:012250622 0 W/12250622-12250622 FN629-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g21780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN3822-S.SNP.12:12251372 chr12:012251372 0 W/12251372-12251372 FN3822-S SNP C -> T AC=1;AN=190;BQB=0.944027;DP=2974;DP4=1497,1399,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40222e-06;MQSB=0.532864;RPB=0.674405;SGB=39.9877;VDB=0.57381;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V1222M|1541|LOC_Os12g21780|protein_coding|CODING|LOC_Os12g21780.1|5|1) FN579-S.SNP.12:12255365 chr12:012255365 0 W/12255365-12255365 FN579-S Single Base Substitution G-C INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN406-S.SNP.12:12259471 chr12:012259471 0 W/12259471-12259471 FN406-S Single Base Substitution A-C UTR_3_PRIME HOMO SNo: 399, Mutant_ID: FN406-S, Generation: M2, Mutations: 62, Genes: 137, Seed availability: Yes. FN3599-S.SNP.12:12261671 chr12:012261671 0 W/12261671-12261671 FN3599-S SNP C -> G AC=1;AN=188;BQB=0.986693;DP=2831;DP4=1776,972,16,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.49546e-15;MQSB=0.978267;RPB=0.0969119;SGB=46.4225;VDB=0.107004;EFF=UTR_5_PRIME(MODIFIER||1108||93|LOC_Os12g21784|protein_coding|CODING|LOC_Os12g21784.1|1|1) FN2725-S.SNP.12:12262962 chr12:012262962 0 W/12262962-12262962 FN2725-S SNP G -> C AC=1;AN=200;BQB=0.798863;DP=4923;DP4=2396,2300,9,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.03221e-11;MQSB=0.845778;RPB=0.806979;SGB=14.3054;VDB=0.198329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.12:12267167 chr12:012267167 0 W/12267167-12267167 FN2242-S SNP G -> T AC=2;AN=190;BQB=0.707212;DP=4756;DP4=2185,2174,27,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000210261;MQB=4.33757e-23;MQSB=0.86508;RPB=0.0396276;SGB=172.05;VDB=0.331206;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S50R|466|LOC_Os12g21789|protein_coding|CODING|LOC_Os12g21789.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S50R|466|LOC_Os12g21789|protein_coding|CODING|LOC_Os12g21789.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S50R|309|LOC_Os12g21789|protein_coding|CODING|LOC_Os12g21789.3|1|1) FN1513-S.SNP.12:12275983 chr12:012275983 0 W/12275983-12275983 FN1513-S Single Base Substitution A-G INTERGENIC HET SNo: 1266, Mutant_ID: FN1513-S, Generation: M2, Mutations: 95, Genes: 23, Seed availability: Yes. FN-221.SNP.12:12276343 chr12:012276343 0 W/12276343-12276343 FN-221 Single Base Substitution A-T INTERGENIC HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN904-S.SNP.12:12277195 chr12:012277195 0 W/12277195-12277195 FN904-S Single Base Substitution C-T INTERGENIC HET SNo: 810, Mutant_ID: FN904-S, Generation: M2, Mutations: 61, Genes: 262, Seed availability: Yes. FN2651-S.SNP.12:12279130 chr12:012279130 0 W/12279130-12279130 FN2651-S SNP T -> C AC=1;AN=200;BQB=0.995719;DP=5051;DP4=2560,2207,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.82796e-09;MQSB=0.932722;RPB=0.936042;SGB=43.8747;VDB=0.328431;EFF=INTERGENIC(MODIFIER||||||||||1) FN568-S.SNP.12:12283577 chr12:012283577 0 W/12283577-12283577 FN568-S Single Base Substitution A-G INTRON HET SNo: 559, Mutant_ID: FN568-S, Generation: M2, Mutations: 54, Genes: 45, Seed availability: Yes. W463-2-1.SNP.12:12293327 chr12:012293327 0 W/12293327-12293327 W463-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN754-S.SNP.12:12308177 chr12:012308177 0 W/12308177-12308177 FN754-S Single Base Substitution T-A INTRON HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN-179.SNP.12:12308651 chr12:012308651 0 W/12308651-12308651 FN-179 Single Base Substitution A-T INTRON HET SNo: 179, Mutant_ID: FN-179, Generation: M2, Mutations: 40, Genes: 10, Seed availability: Yes. FN776-S.SNP.12:12316544 chr12:012316544 0 W/12316544-12316544 FN776-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g21870 type II intron maturase protein, putative, expressed SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN1170-S.SNP.12:12324134 chr12:012324134 0 W/12324134-12324134 FN1170-S Single Base Substitution G-A INTRON HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2271-S.SNP.12:12325967 chr12:012325967 0 W/12325967-12325967 FN2271-S SNP C -> T AC=1;AN=190;BQB=0.996093;DP=4999;DP4=2518,2214,12,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.29079e-14;MQSB=0.342182;RPB=0.610365;SGB=78.7471;VDB=0.334648;EFF=INTRON(MODIFIER||||658|LOC_Os12g21890|protein_coding|CODING|LOC_Os12g21890.1|6|1) FN1363-S.SNP.12:12328796 chr12:012328796 0 W/12328796-12328796 FN1363-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g21890 PTEN, putative, expressed SNo: 1154, Mutant_ID: FN1363-S, Generation: M2, Mutations: 64, Genes: 35, Seed availability: Yes. FN3353-S.SNP.12:12328883 chr12:012328883 0 W/12328883-12328883 FN3353-S SNP C -> T AC=2;AN=184;BQB=0.991313;DP=2822;DP4=1283,1453,16,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.42638e-16;MQSB=0.98684;RPB=0.993441;SGB=88.5747;VDB=0.763929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G117R|658|LOC_Os12g21890|protein_coding|CODING|LOC_Os12g21890.1|2|1) FN2674-S.SNP.12:12337120 chr12:012337120 0 W/12337120-12337120 FN2674-S SNP G -> A AC=1;AN=200;BQB=0.982879;DP=4577;DP4=2269,2004,7,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.11781e-07;MQSB=0.327254;RPB=0.806827;SGB=24.2746;VDB=0.711884;EFF=INTRON(MODIFIER||||839|LOC_Os12g21910|protein_coding|CODING|LOC_Os12g21910.1|1|1) FN3626-S.SNP.12:12338060 chr12:012338060 0 W/12338060-12338060 FN3626-S SNP G -> A AC=1;AN=190;BQB=0.943631;DP=2183;DP4=1114,974,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000458085;MQB=0.000625568;MQSB=0.068504;RPB=0.983621;SGB=18.3316;VDB=0.480966;EFF=INTRON(MODIFIER||||839|LOC_Os12g21910|protein_coding|CODING|LOC_Os12g21910.1|2|1) FN493-S.SNP.12:12347218 chr12:012347218 0 W/12347218-12347218 FN493-S Single Base Substitution C-T INTERGENIC HET SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1186-S.SNP.12:12348523 chr12:012348523 0 W/12348523-12348523 FN1186-S Single Base Substitution C-T INTERGENIC HET SNo: 1023, Mutant_ID: FN1186-S, Generation: M2, Mutations: 68, Genes: 253, Seed availability: Yes. FN1623-S.SNP.12:12350668 chr12:012350668 0 W/12350668-12350668 FN1623-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2138-S.SNP.12:12351079 chr12:012351079 0 W/12351079-12351079 FN2138-S SNP T -> C AC=2;AN=168;BQB=0.302715;DP=2915;DP4=1578,1205,30,21;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=8.22874e-12;MQSB=0.956591;RPB=0.854649;SGB=6.4416;VDB=0.72024;EFF=INTRON(MODIFIER||||459|LOC_Os12g21930|protein_coding|CODING|LOC_Os12g21930.1|1|1),INTRON(MODIFIER||||459|LOC_Os12g21930|protein_coding|CODING|LOC_Os12g21930.2|1|1),INTRON(MODIFIER||||459|LOC_Os12g21930|protein_coding|CODING|LOC_Os12g21930.3|1|1) FN4184-S.SNP.12:12360854 chr12:012360854 0 W/12360854-12360854 FN4184-S SNP A -> T AC=1;AN=170;BQB=0.868538;DP=2243;DP4=1112,1010,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.70626e-08;MQSB=0.993994;RPB=0.833583;SGB=52.3148;VDB=0.688754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcc/Acc|S37T|222|LOC_Os12g21950|protein_coding|CODING|LOC_Os12g21950.1|1|1) FN4022-S.SNP.12:12365035 chr12:012365035 0 W/12365035-12365035 FN4022-S SNP C -> T AC=1;AN=168;BQB=0.575882;DP=2787;DP4=1300,1363,2,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.46346e-05;MQSB=0.910393;RPB=0.541564;SGB=14.8923;VDB=0.519344;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D142|178|LOC_Os12g21970|protein_coding|CODING|LOC_Os12g21970.1|1|1) W475-4-2.SNP.12:12365235 chr12:012365235 0 W/12365235-12365235 W475-4-2 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 1421, Mutant_ID: W475-4-2, Generation: M2, Mutations: 47, Genes: 95, Seed availability: Yes. FN530-S.SNP.12:12371239 chr12:012371239 0 W/12371239-12371239 FN530-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g21990 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN2242-S.SNP.12:12373524 chr12:012373524 0 W/12373524-12373524 FN2242-S SNP T -> A AC=2;AN=190;BQB=0.976259;DP=5154;DP4=2251,2335,30,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.30273e-25;MQSB=0.841417;RPB=0.186984;SGB=56.9429;VDB=0.49597;EFF=INTRON(MODIFIER||||668|LOC_Os12g22000|protein_coding|CODING|LOC_Os12g22000.1|4|1) FN-329.SNP.12:12375960 chr12:012375960 0 W/12375960-12375960 FN-329 Single Base Substitution T-A INTERGENIC HOMO SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. W276-2-1.SNP.12:12378555 chr12:012378555 0 W/12378555-12378555 W276-2-1 Single Base Substitution G-A INTERGENIC HET SNo: 1402, Mutant_ID: W276-2-1, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN1270-S.SNP.12:12380388 chr12:012380388 0 W/12380388-12380388 FN1270-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN3509-S.SNP.12:12385383 chr12:012385383 0 W/12385383-12385383 FN3509-S SNP C -> T AC=1;AN=188;BQB=0.726156;DP=2923;DP4=1389,1443,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.59655e-06;MQSB=0.972375;RPB=0.999935;SGB=35.3493;VDB=0.717818;EFF=INTRON(MODIFIER||||349|LOC_Os12g22020|protein_coding|CODING|LOC_Os12g22020.1|1|1) FN3596-S.SNP.12:12385798 chr12:012385798 0 W/12385798-12385798 FN3596-S SNP C -> A AC=1;AN=188;BQB=0.96491;DP=2829;DP4=1362,1359,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.06319e-05;MQSB=0.980274;RPB=0.933619;SGB=35.3493;VDB=0.926671;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Att|L72I|349|LOC_Os12g22020|protein_coding|CODING|LOC_Os12g22020.1|2|1) FN2711-S.SNP.12:12387800 chr12:012387800 0 W/12387800-12387800 FN2711-S SNP T -> C AC=1;AN=200;BQB=0.98097;DP=4828;DP4=2328,2277,4,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.2806e-06;MQSB=0.914654;RPB=0.99269;SGB=54.2646;VDB=0.891184;EFF=INTRON(MODIFIER||||349|LOC_Os12g22020|protein_coding|CODING|LOC_Os12g22020.1|5|1) FN1638-S.SNP.12:12387847 chr12:012387847 0 W/12387847-12387847 FN1638-S Single Base Substitution T-G INTRON HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN706-S.SNP.12:12392165 chr12:012392165 0 W/12392165-12392165 FN706-S Single Base Substitution A-T INTERGENIC HET SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN-233.SNP.12:12396980 chr12:012396980 0 W/12396980-12396980 FN-233 Single Base Substitution G-A INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3450-S.SNP.12:12411958 chr12:012411958 0 W/12411958-12411958 FN3450-S SNP G -> T AC=2;AN=184;BQB=0.359814;DP=2683;DP4=1362,1248,10,7;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.48539e-07;MQSB=0.989081;RPB=0.776626;SGB=71.3514;VDB=0.935718;EFF=INTRON(MODIFIER||||936|LOC_Os12g22050|protein_coding|CODING|LOC_Os12g22050.1|4|1) FN3342-S.SNP.12:12415500 chr12:012415500 0 W/12415500-12415500 FN3342-S SNP T -> C AC=2;AN=184;BQB=0.934892;DP=2702;DP4=1292,1273,12,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.08539e-15;MQSB=0.839521;RPB=0.430926;SGB=85.0529;VDB=0.266704;EFF=INTRON(MODIFIER||||240|LOC_Os12g22060|protein_coding|CODING|LOC_Os12g22060.1|4|1) FN-171.SNP.12:12417761 chr12:012417761 0 W/12417761-12417761 FN-171 Single Base Substitution T-A INTRON HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN2232-S.SNP.12:12418106 chr12:012418106 0 W/12418106-12418106 FN2232-S SNP T -> C AC=1;AN=190;BQB=0.908177;DP=4942;DP4=2329,2223,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=3.51359e-06;MQSB=0.944617;RPB=0.911469;SGB=21.1058;VDB=0.472475;EFF=INTERGENIC(MODIFIER||||||||||1) FN2379.SNP.12:12418375 chr12:012418375 0 W/12418375-12418375 FN2379 SNP G -> A AC=1;AN=192;BQB=0.600298;DP=4884;DP4=2330,2260,19,21;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.05487e-20;MQSB=0.99814;RPB=0.607251;SGB=-1.22432;VDB=0.266515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2197-S.SNP.12:12420907 chr12:012420907 0 W/12420907-12420907 FN2197-S SNP C -> A AC=1;AN=190;BQB=0.982082;DP=5140;DP4=2386,2407,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.42744e-09;MQSB=0.998244;RPB=0.174338;SGB=39.6545;VDB=0.162982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D300Y|512|LOC_Os12g22080|protein_coding|CODING|LOC_Os12g22080.1|7|1) FN2686-S.SNP.12:12421901 chr12:012421901 0 W/12421901-12421901 FN2686-S SNP G -> A AC=1;AN=200;BQB=0.998067;DP=4781;DP4=2526,2029,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.2371e-05;MQSB=0.948007;RPB=0.803096;SGB=11.2488;VDB=0.146496;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttC/ttT|F202|512|LOC_Os12g22080|protein_coding|CODING|LOC_Os12g22080.1|4|1) FN2663-S.SNP.12:12425761 chr12:012425761 0 W/12425761-12425761 FN2663-S SNP T -> A AC=1;AN=200;BQB=0.161008;DP=4791;DP4=2175,2296,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000208725;MQB=1.20867e-06;MQSB=0.940111;RPB=0.959869;SGB=40.2696;VDB=0.402361;EFF=INTRON(MODIFIER||||547|LOC_Os12g22090|protein_coding|CODING|LOC_Os12g22090.1|1|1),INTRON(MODIFIER||||547|LOC_Os12g22090|protein_coding|CODING|LOC_Os12g22090.2|1|1),INTRON(MODIFIER||||547|LOC_Os12g22090|protein_coding|CODING|LOC_Os12g22090.4|1|1) FN2403.SNP.12:12430437 chr12:012430437 0 W/12430437-12430437 FN2403 SNP A -> T AC=1;AN=200;BQB=0.705288;DP=4111;DP4=1794,1831,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23145e-11;MQSB=0.974078;RPB=0.902754;SGB=12.7003;VDB=0.639752;EFF=INTRON(MODIFIER||||547|LOC_Os12g22090|protein_coding|CODING|LOC_Os12g22090.1|5|1) FN2403.SNP.12:12433567 chr12:012433567 0 W/12433567-12433567 FN2403 SNP G -> A AC=1;AN=200;BQB=0.999695;DP=4413;DP4=2312,1866,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.02754e-09;MQSB=0.924465;RPB=0.999903;SGB=47.4799;VDB=0.883689;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ctg/Ttg|L539|572|LOC_Os12g22110|protein_coding|CODING|LOC_Os12g22110.1|7|1) FN1501-S.SNP.12:12436758 chr12:012436758 0 W/12436758-12436758 FN1501-S Single Base Substitution C-G INTRON HET SNo: 1259, Mutant_ID: FN1501-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN825-S.SNP.12:12441605 chr12:012441605 0 W/12441605-12441605 FN825-S Single Base Substitution C-T INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN445-S.SNP.12:12443694 chr12:012443694 0 W/12443694-12443694 FN445-S Single Base Substitution C-A INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN-168.SNP.12:12445475 chr12:012445475 0 W/12445475-12445475 FN-168 Single Base Substitution T-C INTERGENIC HET SNo: 168, Mutant_ID: FN-168, Generation: M2, Mutations: 46, Genes: 15, Seed availability: Yes. FN633-S.SNP.12:12446267 chr12:012446267 0 W/12446267-12446267 FN633-S Single Base Substitution G-A INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1720-S.SNP.12:12446415 chr12:012446415 0 W/12446415-12446415 FN1720-S SNP C -> T AC=2;AN=188;BQB=0.992589;DP=1703;DP4=597,1056,8,8;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.000587199;MQB=0.00275813;MQSB=0.221631;RPB=0.265602;SGB=26.0762;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.12:12459168 chr12:012459168 0 W/12459168-12459168 FN654-S Single Base Substitution T-C INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2356.SNP.12:12465683 chr12:012465683 0 W/12465683-12465683 FN2356 SNP C -> T AC=1;AN=192;BQB=0.372191;DP=4414;DP4=1881,2299,4,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.24649e-05;MQSB=0.315645;RPB=0.999525;SGB=16.0922;VDB=0.947919;EFF=INTERGENIC(MODIFIER||||||||||1) FN1020-S.SNP.12:12470137 chr12:012470137 0 W/12470137-12470137 FN1020-S Single Base Substitution T-C INTERGENIC HET SNo: 917, Mutant_ID: FN1020-S, Generation: M2, Mutations: 79, Genes: 13, Seed availability: Yes. FN505-S.SNP.12:12473375 chr12:012473375 0 W/12473375-12473375 FN505-S Single Base Substitution G-A INTERGENIC HET SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN2708-S.SNP.12:12474125 chr12:012474125 0 W/12474125-12474125 FN2708-S SNP G -> A AC=1;AN=200;BQB=0.976004;DP=4688;DP4=2344,2128,8,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.97281e-12;MQSB=0.398727;RPB=0.679003;SGB=58.2954;VDB=0.93311;EFF=INTERGENIC(MODIFIER||||||||||1) FN4096-S.SNP.12:12478378 chr12:012478378 0 W/12478378-12478378 FN4096-S SNP G -> A AC=1;AN=182;BQB=0.994927;DP=3091;DP4=1574,1451,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.0064704;MQB=0.998922;MQSB=2.07673e-14;RPB=0.782609;SGB=39.6007;VDB=0.525878;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D713N|1391|LOC_Os12g22150|protein_coding|CODING|LOC_Os12g22150.1|4|1) FN3421-S.SNP.12:12483455 chr12:012483455 0 W/12483455-12483455 FN3421-S SNP C -> T AC=1;AN=184;BQB=0.542404;DP=2372;DP4=903,1314,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00177166;MQSB=0.956061;RPB=0.421779;SGB=35.1773;VDB=0.218349;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.12:12485555 chr12:012485555 0 W/12485555-12485555 FN3787-S SNP C -> A AC=1;AN=190;BQB=0.718745;DP=3048;DP4=1745,1153,10,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.97186e-10;MQSB=0.937934;RPB=0.997925;SGB=31.3213;VDB=0.981862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1534-S.SNP.12:12485558 chr12:012485558 0 W/12485558-12485558 FN1534-S Single Base Substitution C-A INTERGENIC HET SNo: 1284, Mutant_ID: FN1534-S, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2450.SNP.12:12489425 chr12:012489425 0 W/12489425-12489425 FN2450 SNP C -> G AC=1;AN=200;BQB=0.826033;DP=4417;DP4=2101,2083,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06505e-06;MQSB=0.994713;RPB=0.0448692;SGB=25.849;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.12:12489681 chr12:012489681 0 W/12489681-12489681 FN2137-S SNP T -> C AC=1;AN=168;BQB=0.583668;DP=3952;DP4=2076,1833,15,17;HOB=7.08617e-05;ICB=0.000142567;MQ=44;MQ0F=0.00126518;MQB=0.00732666;MQSB=8.32809e-09;RPB=0.846898;SGB=-45.7659;VDB=0.108625;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.12:12500361 chr12:012500361 0 W/12500361-12500361 FN692-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN692-S.SNP.12:12500362 chr12:012500362 0 W/12500362-12500362 FN692-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g22190 retrotransposon protein, putative, unclassified, expressed SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN4234-S.SNP.12:12504911 chr12:012504911 0 W/12504911-12504911 FN4234-S SNP T -> A AC=1;AN=170;BQB=0.957967;DP=2415;DP4=1131,1198,9,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.86115e-08;MQSB=0.992161;RPB=0.897384;SGB=45.206;VDB=0.568335;EFF=INTERGENIC(MODIFIER||||||||||1) FN3766-S.SNP.12:12507904 chr12:012507904 0 W/12507904-12507904 FN3766-S SNP C -> G AC=1;AN=190;BQB=0.957094;DP=2446;DP4=1295,1053,3,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.99055e-05;MQSB=0.991727;RPB=0.349002;SGB=26.3271;VDB=0.35322;EFF=INTERGENIC(MODIFIER||||||||||1) FN462-S.SNP.12:12509172 chr12:012509172 0 W/12509172-12509172 FN462-S Single Base Substitution G-C INTERGENIC HET SNo: 461, Mutant_ID: FN462-S, Generation: M2, Mutations: 72, Genes: 11, Seed availability: Yes. FN1198-S.SNP.12:12518705 chr12:012518705 0 W/12518705-12518705 FN1198-S Single Base Substitution C-T INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN2740-S.SNP.12:12518705 chr12:012518705 0 W/12518705-12518705 FN2740-S SNP C -> T AC=1;AN=200;BQB=0.821882;DP=6241;DP4=3603,2301,23,23;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.165198;MQB=0.209052;MQSB=0;RPB=0.994381;SGB=105.035;VDB=0.865911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2659-S.SNP.12:12520176 chr12:012520176 0 W/12520176-12520176 FN2659-S SNP A -> G AC=1;AN=200;BQB=0.401182;DP=4928;DP4=2629,2083,10,12;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.0121753;MQB=6.32469e-05;MQSB=4.56653e-08;RPB=0.754372;SGB=42.5108;VDB=0.99149;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcC|A820|1122|LOC_Os12g22210|protein_coding|CODING|LOC_Os12g22210.1|3|1) FN3306-S.SNP.12:12520350 chr12:012520350 0 W/12520350-12520350 FN3306-S SNP G -> A AC=2;AN=184;BQB=0.862017;DP=3122;DP4=1372,1650,14,20;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.0429212;MQB=0.984748;MQSB=0;RPB=0.827687;SGB=148.222;VDB=0.095307;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L762|1122|LOC_Os12g22210|protein_coding|CODING|LOC_Os12g22210.1|3|1) FN776-S.SNP.12:12521416 chr12:012521416 0 W/12521416-12521416 FN776-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN2573-S.SNP.12:12521516 chr12:012521516 0 W/12521516-12521516 FN2573-S SNP G -> A AC=2;AN=186;BQB=0.582781;DP=3825;DP4=1910,1758,11,10;HOB=0.0212741;ICB=0.494682;MQ=43;MQ0F=0.0326797;MQB=0.0376221;MQSB=1.86144e-12;RPB=0.741153;SGB=90.9049;VDB=0.203514;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P406L|1122|LOC_Os12g22210|protein_coding|CODING|LOC_Os12g22210.1|2|1) FN2209-S.SNP.12:12527777 chr12:012527777 0 W/12527777-12527777 FN2209-S SNP C -> A AC=1;AN=190;BQB=0.750532;DP=3642;DP4=1589,1536,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00906096;MQB=0.0129952;MQSB=5.40259e-07;RPB=0.669909;SGB=39.9877;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN3849-S.SNP.12:12528665 chr12:012528665 0 W/12528665-12528665 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.793929;DP=2603;DP4=1109,1373,9,9;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0138302;MQB=0.000255908;MQSB=2.39368e-14;RPB=0.146612;SGB=28.5576;VDB=0.534938;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.12:12528677 chr12:012528677 0 W/12528677-12528677 FN-335 Single Base Substitution T-C INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN4175-S.SNP.12:12528990 chr12:012528990 0 W/12528990-12528990 FN4175-S SNP C -> T AC=1;AN=170;BQB=0.96095;DP=2364;DP4=1097,1199,1,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.86903e-05;MQSB=0.324621;RPB=0.942661;SGB=38.987;VDB=0.651537;EFF=INTERGENIC(MODIFIER||||||||||1) FN1022-S.SNP.12:12529197 chr12:012529197 0 W/12529197-12529197 FN1022-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN516-S.SNP.12:12530356 chr12:012530356 0 W/12530356-12530356 FN516-S Single Base Substitution T-G INTRON HET SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN2289.SNP.12:12531153 chr12:012531153 0 W/12531153-12531153 FN2289 SNP G -> A AC=2;AN=192;BQB=0.414355;DP=4781;DP4=2279,2166,28,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.57738e-21;MQSB=0.817281;RPB=0.570647;SGB=110.973;VDB=0.15756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E460K|612|LOC_Os12g22230|protein_coding|CODING|LOC_Os12g22230.1|6|1) FN781-S.SNP.12:12532300 chr12:012532300 0 W/12532300-12532300 FN781-S Single Base Substitution A-G INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN819-S.SNP.12:12544403 chr12:012544403 0 W/12544403-12544403 FN819-S Single Base Substitution C-A INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2767-S.SNP.12:12545591 chr12:012545591 0 W/12545591-12545591 FN2767-S SNP G -> T AC=1;AN=190;BQB=0.337246;DP=3755;DP4=1736,1836,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00585885;MQB=9.5425e-05;MQSB=7.03502e-08;RPB=0.0161105;SGB=21.559;VDB=0.104379;EFF=INTERGENIC(MODIFIER||||||||||1) FN1314-S.SNP.12:12546814 chr12:012546814 0 W/12546814-12546814 FN1314-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g22260 retrotransposon protein, putative, unclassified, expressed SNo: 1117, Mutant_ID: FN1314-S, Generation: M2, Mutations: 56, Genes: 11, Seed availability: Yes. FN-362.SNP.12:12549351 chr12:012549351 0 W/12549351-12549351 FN-362 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3852-S.SNP.12:12552020 chr12:012552020 0 W/12552020-12552020 FN3852-S SNP C -> G AC=1;AN=158;BQB=0.963778;DP=2380;DP4=1141,1151,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.27465e-08;MQSB=0.980949;RPB=0.97435;SGB=51.4366;VDB=0.881805;EFF=INTERGENIC(MODIFIER||||||||||1) FN1122-S.SNP.12:12558659 chr12:012558659 0 W/12558659-12558659 FN1122-S Single Base Substitution A-G INTERGENIC HET SNo: 994, Mutant_ID: FN1122-S, Generation: M2, Mutations: 57, Genes: 41, Seed availability: Yes. FN1531-S.SNP.12:12561331 chr12:012561331 0 W/12561331-12561331 FN1531-S Single Base Substitution C-T INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1124-S.SNP.12:12562005 chr12:012562005 0 W/12562005-12562005 FN1124-S Single Base Substitution G-A INTERGENIC HOMO SNo: 996, Mutant_ID: FN1124-S, Generation: M2, Mutations: 65, Genes: 61, Seed availability: Yes. FN1435-S.SNP.12:12563046 chr12:012563046 0 W/12563046-12563046 FN1435-S Single Base Substitution G-A INTERGENIC HET SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN3574-S.SNP.12:12583631 chr12:012583631 0 W/12583631-12583631 FN3574-S SNP A -> G AC=2;AN=188;BQB=0.9613;DP=2756;DP4=1257,1418,18,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.63075e-24;MQSB=0.993135;RPB=0.291917;SGB=128.11;VDB=0.182864;EFF=INTRON(MODIFIER||||713|LOC_Os12g22284|protein_coding|CODING|LOC_Os12g22284.1|1|1) FN441-S.SNP.12:12586296 chr12:012586296 0 W/12586296-12586296 FN441-S Single Base Substitution C-T INTRON HET SNo: 440, Mutant_ID: FN441-S, Generation: M2, Mutations: 68, Genes: 16, Seed availability: Yes. FN2149-S.SNP.12:12587624 chr12:012587624 0 W/12587624-12587624 FN2149-S SNP T -> A AC=1;AN=168;BQB=0.30208;DP=3927;DP4=1907,1986,12,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.12685e-11;MQSB=0.988883;RPB=0.58928;SGB=14.2064;VDB=0.0168546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2372.SNP.12:12588262 chr12:012588262 0 W/12588262-12588262 FN2372 SNP T -> A AC=1;AN=192;BQB=0.874451;DP=4518;DP4=2345,1961,6,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.24477e-06;MQSB=0.910013;RPB=0.908414;SGB=29.087;VDB=0.387541;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.12:12594795 chr12:012594795 0 W/12594795-12594795 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.989506;DP=2815;DP4=1402,1217,5,107;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.0259325;MQB=0;MQSB=0.000403322;RPB=7.93286e-20;SGB=-1469.91;VDB=2.02969e-24;EFF=INTERGENIC(MODIFIER||||||||||1) FN1636-S.SNP.12:12595661 chr12:012595661 0 W/12595661-12595661 FN1636-S Single Base Substitution C-T INTERGENIC Homo SNo: 1342, Mutant_ID: FN1636-S, Generation: M2, Mutations: 91, Genes: 44, Seed availability: Yes. FN859-S.SNP.12:12598716 chr12:012598716 0 W/12598716-12598716 FN859-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g22310 retrotransposon protein, putative, unclassified, expressed SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN-171.SNP.12:12601246 chr12:012601246 0 W/12601246-12601246 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1380-S.SNP.12:12606164 chr12:012606164 0 W/12606164-12606164 FN1380-S Single Base Substitution A-G INTRON HOMO SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN1104-S.SNP.12:12607066 chr12:012607066 0 W/12607066-12607066 FN1104-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN-187.SNP.12:12610525 chr12:012610525 0 W/12610525-12610525 FN-187 Single Base Substitution G-T INTRON HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-274.SNP.12:12610525 chr12:012610525 0 W/12610525-12610525 FN-274 Single Base Substitution G-T INTRON HOMO SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN2582-S.SNP.12:12610525 chr12:012610525 0 W/12610525-12610525 FN2582-S SNP G -> T AC=2;AN=198;BQB=0.186337;DP=4027;DP4=2018,1827,8,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=6.0234e-11;MQSB=0.409747;RPB=0.996408;SGB=100.095;VDB=0.0105982;EFF=INTRON(MODIFIER||||667|LOC_Os12g22330|protein_coding|CODING|LOC_Os12g22330.1|3|1) FN3707-S.SNP.12:12610525 chr12:012610525 0 W/12610525-12610525 FN3707-S SNP G -> T AC=1;AN=190;BQB=0.993773;DP=2725;DP4=1364,1259,8,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21997e-11;MQSB=0.974667;RPB=0.997965;SGB=60.9777;VDB=0.282448;EFF=INTRON(MODIFIER||||667|LOC_Os12g22330|protein_coding|CODING|LOC_Os12g22330.1|3|1) FN3893-S.SNP.12:12610525 chr12:012610525 0 W/12610525-12610525 FN3893-S SNP G -> T AC=2;AN=158;BQB=0.910036;DP=2413;DP4=1225,1082,16,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=3.62729e-13;MQSB=1;RPB=0.121861;SGB=74.5068;VDB=0.696566;EFF=INTRON(MODIFIER||||667|LOC_Os12g22330|protein_coding|CODING|LOC_Os12g22330.1|3|1) FN1108-S.SNP.12:12610745 chr12:012610745 0 W/12610745-12610745 FN1108-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2540-S.SNP.12:12612167 chr12:012612167 0 W/12612167-12612167 FN2540-S SNP T -> G AC=1;AN=198;BQB=0.970233;DP=4221;DP4=2050,1874,15,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=6.2216e-10;MQSB=0.997645;RPB=0.821942;SGB=68.91;VDB=0.113714;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.12:12612891 chr12:012612891 0 W/12612891-12612891 FN1761-S SNP G -> T AC=1;AN=188;BQB=0.050073;DP=3961;DP4=2039,1886,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000252461;MQB=0.0181096;MQSB=0.48385;RPB=0.653698;SGB=-35.9944;VDB=0.778584;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.12:12614284 chr12:012614284 0 W/12614284-12614284 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.950571;DP=3942;DP4=2025,1780,15,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000253678;MQB=1.55976e-13;MQSB=0.7871;RPB=0.730984;SGB=85.0529;VDB=0.0740933;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A221|298|LOC_Os12g22340|protein_coding|CODING|LOC_Os12g22340.1|2|1) FN1388-S.SNP.12:12614714 chr12:012614714 0 W/12614714-12614714 FN1388-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g22340 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 1172, Mutant_ID: FN1388-S, Generation: M2, Mutations: 49, Genes: 16, Seed availability: Yes. FN3432-S.SNP.12:12615099 chr12:012615099 0 W/12615099-12615099 FN3432-S SNP G -> A AC=1;AN=184;BQB=0.939875;DP=3903;DP4=1878,1898,16,22;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0327953;MQB=0.018303;MQSB=1.75189e-25;RPB=0.998719;SGB=123.793;VDB=0.743438;EFF=INTRON(MODIFIER||||298|LOC_Os12g22340|protein_coding|CODING|LOC_Os12g22340.1|1|1) FN-306.SNP.12:12616955 chr12:012616955 0 W/12616955-12616955 FN-306 Single Base Substitution G-T INTRON HET SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2704-S.SNP.12:12617631 chr12:012617631 0 W/12617631-12617631 FN2704-S SNP C -> T AC=1;AN=200;BQB=0.996095;DP=4775;DP4=2315,2206,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.32851e-08;MQSB=0.936691;RPB=0.314022;SGB=33.0593;VDB=0.470998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3486-S.SNP.12:12619680 chr12:012619680 0 W/12619680-12619680 FN3486-S SNP A -> G AC=2;AN=184;BQB=2.34718e-07;DP=3030;DP4=1641,1311,10,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.2474e-07;MQSB=0.77983;RPB=0.914638;SGB=62.3078;VDB=0.00181218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3651-S.SNP.12:12631594 chr12:012631594 0 W/12631594-12631594 FN3651-S SNP C -> T AC=1;AN=190;BQB=0.845822;DP=2994;DP4=1263,1608,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.82779e-06;MQSB=0.938478;RPB=0.995795;SGB=36.1006;VDB=0.415366;EFF=INTERGENIC(MODIFIER||||||||||1) FN1446-S.SNP.12:12631597 chr12:012631597 0 W/12631597-12631597 FN1446-S Single Base Substitution T-A INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN3486-S.SNP.12:12632594 chr12:012632594 0 W/12632594-12632594 FN3486-S SNP G -> A AC=2;AN=184;BQB=0.357316;DP=2888;DP4=1520,1187,23,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.51337e-12;MQSB=0.931493;RPB=0.970171;SGB=29.6292;VDB=0.8173;EFF=INTRON(MODIFIER||||315|LOC_Os12g22370|protein_coding|CODING|LOC_Os12g22370.1|1|1) FN1062-S.SNP.12:12632873 chr12:012632873 0 W/12632873-12632873 FN1062-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN429-S.SNP.12:12636112 chr12:012636112 0 W/12636112-12636112 FN429-S Single Base Substitution T-G INTRON HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2649-S.SNP.12:12640022 chr12:012640022 0 W/12640022-12640022 FN2649-S SNP T -> G AC=2;AN=200;BQB=0.994428;DP=4919;DP4=2319,2329,34,33;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000406587;MQB=5.7703e-28;MQSB=0.645708;RPB=0.966477;SGB=159.743;VDB=0.925632;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cCg|Q346P|923|LOC_Os12g22380|protein_coding|CODING|LOC_Os12g22380.1|3|1) FN-348.SNP.12:12642644 chr12:012642644 0 W/12642644-12642644 FN-348 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g22390 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 339, Mutant_ID: FN-348, Generation: M2, Mutations: 52, Genes: 246, Seed availability: Yes. FN-137.SNP.12:12642721 chr12:012642721 0 W/12642721-12642721 FN-137 Single Base Substitution T-G INTRON HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN703-S.SNP.12:12647790 chr12:012647790 0 W/12647790-12647790 FN703-S Single Base Substitution A-T INTERGENIC HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN-245.SNP.12:12648583 chr12:012648583 0 W/12648583-12648583 FN-245 Single Base Substitution G-A INTERGENIC HET SNo: 244, Mutant_ID: FN-245, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN514-S.SNP.12:12648895 chr12:012648895 0 W/12648895-12648895 FN514-S Single Base Substitution C-T STOP_GAINED HET LOC_Os12g22400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3818-S.SNP.12:12649539 chr12:012649539 0 W/12649539-12649539 FN3818-S SNP C -> T AC=1;AN=190;BQB=0.604407;DP=3107;DP4=1456,1565,12,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.76067e-12;MQSB=0.978167;RPB=0.113385;SGB=75.1932;VDB=0.0547007;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctT|L247|771|LOC_Os12g22400|protein_coding|CODING|LOC_Os12g22400.1|2|1) FN1382-S.SNP.12:12649558 chr12:012649558 0 W/12649558-12649558 FN1382-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g22400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN959-S.SNP.12:12651513 chr12:012651513 0 W/12651513-12651513 FN959-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g22400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 863, Mutant_ID: FN959-S, Generation: M2, Mutations: 78, Genes: 19, Seed availability: Yes. FN2327.SNP.12:12656337 chr12:012656337 0 W/12656337-12656337 FN2327 SNP T -> A AC=1;AN=192;BQB=0.645741;DP=5325;DP4=2409,2662,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.43618e-11;MQSB=0.00200944;RPB=0.886082;SGB=44.3;VDB=0.195369;EFF=INTERGENIC(MODIFIER||||||||||1) FN4112-S.SNP.12:12658303 chr12:012658303 0 W/12658303-12658303 FN4112-S SNP C -> T AC=1;AN=182;BQB=0.940358;DP=3620;DP4=1655,1820,30,12;HOB=6.03792e-05;ICB=0.000121422;MQ=34;MQ0F=0.162707;MQB=2.78176e-06;MQSB=0.000869605;RPB=0.963391;SGB=-513.632;VDB=0.000101859;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.12:12659043 chr12:012659043 0 W/12659043-12659043 FN2765-S SNP G -> C AC=2;AN=198;BQB=0.790054;DP=3778;DP4=1831,1762,19,13;HOB=0.019998;ICB=0.495001;MQ=30;MQ0F=0.154314;MQB=0.598837;MQSB=0.0294639;RPB=0.507699;SGB=141.451;VDB=0.868985;EFF=INTERGENIC(MODIFIER||||||||||1) FN3485-S.SNP.12:12659043 chr12:012659043 0 W/12659043-12659043 FN3485-S SNP G -> C AC=2;AN=184;BQB=0.999987;DP=2832;DP4=1299,1430,16,15;HOB=0.0215028;ICB=0.494625;MQ=22;MQ0F=0.285664;MQB=0.963209;MQSB=7.45352e-08;RPB=0.949488;SGB=134.656;VDB=0.511065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3821-S.SNP.12:12659043 chr12:012659043 0 W/12659043-12659043 FN3821-S SNP G -> C AC=2;AN=190;BQB=0.833387;DP=2822;DP4=1352,1370,14,12;HOB=0.020831;ICB=0.494793;MQ=23;MQ0F=0.282069;MQB=0.482594;MQSB=7.77398e-08;RPB=0.333578;SGB=112.85;VDB=0.206163;EFF=INTERGENIC(MODIFIER||||||||||1) FN395-S.SNP.12:12659043 chr12:012659043 0 W/12659043-12659043 FN395-S Single Base Substitution G-C INTERGENIC HET SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4305-S.SNP.12:12659043 chr12:012659043 0 W/12659043-12659043 FN4305-S SNP G -> C AC=1;AN=170;BQB=0.997829;DP=2552;DP4=1145,1350,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=23;MQ0F=0.275862;MQB=0.486045;MQSB=1.96369e-10;RPB=0.736329;SGB=61.2001;VDB=0.00835046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.12:12662798 chr12:012662798 0 W/12662798-12662798 FN2479 SNP G -> A AC=2;AN=200;BQB=0.792498;DP=4313;DP4=2265,1502,20,14;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0326919;MQB=0.998337;MQSB=3.26333e-34;RPB=0.99301;SGB=150.973;VDB=0.863168;EFF=INTERGENIC(MODIFIER||||||||||1) FN1403-S.SNP.12:12664634 chr12:012664634 0 W/12664634-12664634 FN1403-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN2403.SNP.12:12671010 chr12:012671010 0 W/12671010-12671010 FN2403 SNP C -> T AC=1;AN=200;BQB=0.995477;DP=4433;DP4=2257,1971,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.63472e-07;MQSB=0.998823;RPB=0.169983;SGB=29.4541;VDB=0.138406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M329I|493|LOC_Os12g22440|protein_coding|CODING|LOC_Os12g22440.1|1|1) FN-306.SNP.12:12671953 chr12:012671953 0 W/12671953-12671953 FN-306 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g22440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 301, Mutant_ID: FN-306, Generation: M2, Mutations: 55, Genes: 7, Seed availability: Yes. FN2734-S.SNP.12:12676653 chr12:012676653 0 W/12676653-12676653 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.604653;DP=4917;DP4=2213,2480,13,16;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0331503;MQB=0.961936;MQSB=8.18485e-16;RPB=0.659871;SGB=94.3471;VDB=0.467626;EFF=INTERGENIC(MODIFIER||||||||||1) FN-185.SNP.12:12677687 chr12:012677687 0 W/12677687-12677687 FN-185 Single Base Substitution A-G INTERGENIC HET SNo: 185, Mutant_ID: FN-185, Generation: M2, Mutations: 49, Genes: 14, Seed availability: No. FN1512-S.SNP.12:12677782 chr12:012677782 0 W/12677782-12677782 FN1512-S Single Base Substitution G-A INTERGENIC Homo SNo: 1265, Mutant_ID: FN1512-S, Generation: M2, Mutations: 95, Genes: 34, Seed availability: Yes. FN3381-S.SNP.12:12682755 chr12:012682755 0 W/12682755-12682755 FN3381-S SNP A -> C AC=1;AN=184;BQB=0.995119;DP=2699;DP4=790,1215,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.20428e-08;MQSB=0.629933;RPB=0.992645;SGB=-56.2685;VDB=0.322023;EFF=INTRON(MODIFIER||||299|LOC_Os12g22470|protein_coding|CODING|LOC_Os12g22470.1|2|1) FN2589-S.SNP.12:12683406 chr12:012683406 0 W/12683406-12683406 FN2589-S SNP C -> T AC=1;AN=198;BQB=0.384997;DP=4244;DP4=1959,2075,7,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.32016e-05;MQSB=0.318992;RPB=0.646693;SGB=40.3588;VDB=0.0362545;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Tct|P71S|299|LOC_Os12g22470|protein_coding|CODING|LOC_Os12g22470.1|3|1) FN472-S.SNP.12:12690033 chr12:012690033 0 W/12690033-12690033 FN472-S Single Base Substitution T-C INTERGENIC HOMO SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN4138-S.SNP.12:12696290 chr12:012696290 0 W/12696290-12696290 FN4138-S SNP T -> A AC=2;AN=170;BQB=0.99989;DP=1930;DP4=1100,762,10,6;HOB=0.0232526;ICB=0.494188;MQ=27;MQ0F=0.146114;MQB=0.999452;MQSB=0;RPB=0.448149;SGB=65.6427;VDB=0.972898;EFF=INTERGENIC(MODIFIER||||||||||1) FN2178-S.SNP.12:12697712 chr12:012697712 0 W/12697712-12697712 FN2178-S SNP C -> G AC=1;AN=168;BQB=0.0242612;DP=2478;DP4=1602,831,7,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000328989;MQSB=0.904451;RPB=0.93168;SGB=-2.96336;VDB=0.91083;EFF=INTERGENIC(MODIFIER||||||||||1) FN2482.SNP.12:12706471 chr12:012706471 0 W/12706471-12706471 FN2482 SNP C -> T AC=1;AN=200;BQB=0.30695;DP=4803;DP4=2337,2117,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.56601e-06;MQSB=0.979779;RPB=0.0220566;SGB=35.8441;VDB=0.0337118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2754-S.SNP.12:12708738 chr12:012708738 0 W/12708738-12708738 FN2754-S SNP C -> A AC=1;AN=200;BQB=0.518326;DP=4815;DP4=2392,2227,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.00033558;MQSB=0.963705;RPB=0.974523;SGB=29.4541;VDB=0.695687;EFF=INTRON(MODIFIER||||520|LOC_Os12g22510|protein_coding|CODING|LOC_Os12g22510.1|2|1) FN3752-S.SNP.12:12709058 chr12:012709058 0 W/12709058-12709058 FN3752-S SNP G -> A AC=1;AN=190;BQB=0.991727;DP=2788;DP4=1233,1461,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.4645e-05;MQSB=0.982126;RPB=0.740735;SGB=30.8803;VDB=0.362417;EFF=INTRON(MODIFIER||||520|LOC_Os12g22510|protein_coding|CODING|LOC_Os12g22510.1|2|1) FN3889-S.SNP.12:12720356 chr12:012720356 0 W/12720356-12720356 FN3889-S SNP A -> T AC=1;AN=158;BQB=0.9995;DP=3082;DP4=1342,1596,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.63765e-06;MQSB=0.991786;RPB=0.793316;SGB=38.3284;VDB=0.847464;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.12:12724846 chr12:012724846 0 W/12724846-12724846 FN-237 Single Base Substitution G-C INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN925-S.SNP.12:12731002 chr12:012731002 0 W/12731002-12731002 FN925-S Single Base Substitution T-C INTERGENIC HET SNo: 831, Mutant_ID: FN925-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN775-S.SNP.12:12736779 chr12:012736779 0 W/12736779-12736779 FN775-S Single Base Substitution G-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN476-S.SNP.12:12739421 chr12:012739421 0 W/12739421-12739421 FN476-S Single Base Substitution G-A INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN-207.SNP.12:12744275 chr12:012744275 0 W/12744275-12744275 FN-207 Single Base Substitution C-T INTRON HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3722-S.SNP.12:12748489 chr12:012748489 0 W/12748489-12748489 FN3722-S SNP G -> A AC=1;AN=190;BQB=0.911115;DP=3097;DP4=1295,1700,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0878269;MQB=0.0934661;MQSB=3.34056e-15;RPB=0.865112;SGB=57.4238;VDB=0.966392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V376I|816|LOC_Os12g22590|protein_coding|CODING|LOC_Os12g22590.1|1|1) FN1216-S.SNP.12:12753199 chr12:012753199 0 W/12753199-12753199 FN1216-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN4103-S.SNP.12:12755017 chr12:012755017 0 W/12755017-12755017 FN4103-S SNP C -> T AC=1;AN=182;BQB=0.962046;DP=2256;DP4=1037,1107,5,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.91902e-05;MQSB=0.915826;RPB=0.333281;SGB=18.0739;VDB=0.782768;EFF=INTERGENIC(MODIFIER||||||||||1) FN302-S.SNP.12:12760847 chr12:012760847 0 W/12760847-12760847 FN302-S Single Base Substitution G-A INTERGENIC HOMO SNo: 297, Mutant_ID: FN302-S, Generation: M2, Mutations: 50, Genes: 2, Seed availability: Yes. FN3998-S.SNP.12:12766090 chr12:012766090 0 W/12766090-12766090 FN3998-S SNP C -> T AC=2;AN=168;BQB=0.947456;DP=2667;DP4=1332,1111,18,8;HOB=0.0235261;ICB=0.494119;MQ=47;MQ0F=0;MQB=2.59214e-09;MQSB=0.0632662;RPB=0.964154;SGB=48.9237;VDB=0.629289;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.12:12770125 chr12:012770125 0 W/12770125-12770125 FN2408 SNP G -> T AC=1;AN=200;BQB=0.957355;DP=4356;DP4=2020,1928,6,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000229568;MQB=3.15701e-06;MQSB=0.0224132;RPB=0.143741;SGB=25.849;VDB=0.372756;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.12:12771937 chr12:012771937 0 W/12771937-12771937 FN962-S Single Base Substitution C-T INTRON HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN601-S.SNP.12:12777268 chr12:012777268 0 W/12777268-12777268 FN601-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 582, Mutant_ID: FN601-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN2582-S.SNP.12:12790755 chr12:012790755 0 W/12790755-12790755 FN2582-S SNP G -> T AC=1;AN=188;BQB=0.999949;DP=3054;DP4=1555,1386,4,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000295535;MQSB=0.984203;RPB=0.849659;SGB=21.981;VDB=0.706942;EFF=INTERGENIC(MODIFIER||||||||||1) FN2315.SNP.12:12796216 chr12:012796216 0 W/12796216-12796216 FN2315 SNP T -> C AC=1;AN=192;BQB=0.134694;DP=5147;DP4=2369,2494,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.60073e-13;MQSB=0.986633;RPB=0.997063;SGB=51.9931;VDB=0.944219;EFF=INTERGENIC(MODIFIER||||||||||1) FN442-S.SNP.12:12804410 chr12:012804410 0 W/12804410-12804410 FN442-S Single Base Substitution G-T INTERGENIC HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN1527-S.SNP.12:12806022 chr12:012806022 0 W/12806022-12806022 FN1527-S Single Base Substitution T-C INTERGENIC HET SNo: 1278, Mutant_ID: FN1527-S, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. W453-3-1.SNP.12:12806271 chr12:012806271 0 W/12806271-12806271 W453-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN2790-S.SNP.12:12810644 chr12:012810644 0 W/12810644-12810644 FN2790-S SNP C -> T AC=1;AN=198;BQB=0.269907;DP=3910;DP4=1856,1871,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000255754;MQB=6.0803e-06;MQSB=0.994778;RPB=0.573504;SGB=40.3588;VDB=0.976977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A11V|646|LOC_Os12g22690|protein_coding|CODING|LOC_Os12g22690.1|1|1) FN-328.SNP.12:12817761 chr12:012817761 0 W/12817761-12817761 FN-328 Single Base Substitution T-C INTERGENIC HOMO SNo: 321, Mutant_ID: FN-328, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN2765-S.SNP.12:12818534 chr12:012818534 0 W/12818534-12818534 FN2765-S SNP C -> A AC=1;AN=198;BQB=0.100965;DP=3633;DP4=1678,1779,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.28274e-06;MQSB=0.276513;RPB=0.951074;SGB=36.5539;VDB=0.500601;EFF=INTRON(MODIFIER||||264|LOC_Os12g22720|protein_coding|CODING|LOC_Os12g22720.1|2|1) FN1103-S.SNP.12:12824701 chr12:012824701 0 W/12824701-12824701 FN1103-S Single Base Substitution A-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN2587-S.SNP.12:12828030 chr12:012828030 0 W/12828030-12828030 FN2587-S SNP G -> A AC=2;AN=198;BQB=0.236462;DP=4213;DP4=2146,1809,35,15;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=9.38542e-24;MQSB=0.945434;RPB=0.729398;SGB=114.983;VDB=0.578396;EFF=INTRON(MODIFIER||||827|LOC_Os12g22740|protein_coding|CODING|LOC_Os12g22740.1|3|1) FN3387-S.SNP.12:12829338 chr12:012829338 0 W/12829338-12829338 FN3387-S SNP G -> A AC=2;AN=184;BQB=0.0278052;DP=2574;DP4=1268,1194,12,24;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.03256e-12;MQSB=0.869653;RPB=0.440217;SGB=157.265;VDB=0.677661;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cta/Tta|L454|827|LOC_Os12g22740|protein_coding|CODING|LOC_Os12g22740.1|2|1) FN-174.SNP.12:12831522 chr12:012831522 0 W/12831522-12831522 FN-174 Single Base Substitution A-G INTERGENIC HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN3710-S.SNP.12:12832251 chr12:012832251 0 W/12832251-12832251 FN3710-S SNP T -> A AC=1;AN=190;BQB=0.984764;DP=3068;DP4=1482,1444,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.35316e-11;MQSB=0.876033;RPB=0.37448;SGB=31.3213;VDB=0.232648;EFF=INTERGENIC(MODIFIER||||||||||1) FN496-S.SNP.12:12854157 chr12:012854157 0 W/12854157-12854157 FN496-S Single Base Substitution T-G INTERGENIC HOMO SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2221-S.SNP.12:12858705 chr12:012858705 0 W/12858705-12858705 FN2221-S SNP C -> T AC=2;AN=190;BQB=0.774097;DP=3566;DP4=1090,2266,12,32;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000280426;MQB=1.67357e-15;MQSB=1.15771e-21;RPB=0.933926;SGB=194.819;VDB=0.582657;EFF=INTERGENIC(MODIFIER||||||||||1) FN942-S.SNP.12:12860592 chr12:012860592 0 W/12860592-12860592 FN942-S Single Base Substitution G-T INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN942-S.SNP.12:12860593 chr12:012860593 0 W/12860593-12860593 FN942-S Single Base Substitution G-T INTERGENIC HET SNo: 848, Mutant_ID: FN942-S, Generation: M2, Mutations: 54, Genes: 38, Seed availability: Yes. FN2437.SNP.12:12860879 chr12:012860879 0 W/12860879-12860879 FN2437 SNP G -> A AC=1;AN=200;BQB=0.940836;DP=4341;DP4=1971,2155,12,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56871e-15;MQSB=0.966812;RPB=0.983632;SGB=83.5316;VDB=0.480218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.12:12884598 chr12:012884598 0 W/12884598-12884598 FN3309-S SNP C -> A AC=1;AN=184;BQB=0.876291;DP=3070;DP4=1562,1414,12,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.44318e-11;MQSB=0.992685;RPB=0.657048;SGB=103.004;VDB=0.871941;EFF=INTERGENIC(MODIFIER||||||||||1) FN-143.SNP.12:12889802 chr12:012889802 0 W/12889802-12889802 FN-143 Single Base Substitution G-A INTERGENIC HOMO SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2556-S.SNP.12:12904832 chr12:012904832 0 W/12904832-12904832 FN2556-S SNP C -> T AC=1;AN=198;BQB=0.94578;DP=4243;DP4=2026,2009,6,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.94931e-10;MQSB=0.996186;RPB=0.974101;SGB=58.1246;VDB=0.11217;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.12:12909256 chr12:012909256 0 W/12909256-12909256 FN3970-S SNP G -> A AC=1;AN=168;BQB=0.991085;DP=2828;DP4=1111,1625,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.34759e-09;MQSB=0.71355;RPB=0.966372;SGB=51.902;VDB=0.917541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aAg|R30K|73|LOC_Os12g22870|protein_coding|CODING|LOC_Os12g22870.1|1|1) FN4208-S.SNP.12:12910949 chr12:012910949 0 W/12910949-12910949 FN4208-S SNP C -> A AC=1;AN=170;BQB=0.997677;DP=2354;DP4=1391,842,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.17121e-07;MQSB=0.997923;RPB=0.178953;SGB=52.3148;VDB=0.35295;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.12:12912783 chr12:012912783 0 W/12912783-12912783 FN2331 SNP A -> C AC=2;AN=192;BQB=0.43269;DP=4684;DP4=1993,2386,18,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000426985;MQB=1.11537e-18;MQSB=0.935818;RPB=0.927671;SGB=128.889;VDB=0.826932;EFF=INTRON(MODIFIER||||226|LOC_Os12g22880|protein_coding|CODING|LOC_Os12g22880.1|1|1) FN3506-S.SNP.12:12916311 chr12:012916311 0 W/12916311-12916311 FN3506-S SNP C -> A AC=2;AN=188;BQB=0.321483;DP=1857;DP4=402,1208,6,7;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=6.44155e-07;MQSB=3.76956e-16;RPB=0.994202;SGB=18.4463;VDB=0.818953;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.12:12922767 chr12:012922767 0 W/12922767-12922767 FN692-S Single Base Substitution G-A INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN2322.SNP.12:12932499 chr12:012932499 0 W/12932499-12932499 FN2322 SNP C -> T AC=1;AN=192;BQB=0.149667;DP=4015;DP4=1833,1858,7,7;HOB=5.42535e-05;ICB=0.000109072;MQ=35;MQ0F=0.0343711;MQB=0.951438;MQSB=2.85535e-23;RPB=0.93123;SGB=21.2209;VDB=0.657675;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T46M|161|LOC_Os12g22900|protein_coding|CODING|LOC_Os12g22900.1|1|1) FN2411.SNP.12:12932499 chr12:012932499 0 W/12932499-12932499 FN2411 SNP C -> T AC=1;AN=200;BQB=0.981117;DP=2326;DP4=1344,759,7,1;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.0356836;MQB=0.955702;MQSB=1.81958e-09;RPB=0.944222;SGB=31.2392;VDB=0.201783;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T46M|161|LOC_Os12g22900|protein_coding|CODING|LOC_Os12g22900.1|1|1) FN2675-S.SNP.12:12932499 chr12:012932499 0 W/12932499-12932499 FN2675-S SNP C -> T AC=2;AN=200;BQB=0.987618;DP=4134;DP4=1895,1960,24,19;HOB=0.0198;ICB=0.495051;MQ=36;MQ0F=0.0333817;MQB=0.888533;MQSB=3.44888e-23;RPB=0.841871;SGB=97.2193;VDB=0.858902;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T46M|161|LOC_Os12g22900|protein_coding|CODING|LOC_Os12g22900.1|1|1) FN3426-S.SNP.12:12932499 chr12:012932499 0 W/12932499-12932499 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.705365;DP=2890;DP4=1294,1491,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0273356;MQB=0.601517;MQSB=0.43195;RPB=0.114997;SGB=71.3514;VDB=0.501201;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T46M|161|LOC_Os12g22900|protein_coding|CODING|LOC_Os12g22900.1|1|1) FN928-S.SNP.12:12932499 chr12:012932499 0 W/12932499-12932499 FN928-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g22900 transposon protein, putative, CACTA, En/Spm sub-class SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN672-S.SNP.12:12948510 chr12:012948510 0 W/12948510-12948510 FN672-S Single Base Substitution C-T INTERGENIC HET SNo: 608, Mutant_ID: FN672-S, Generation: M2, Mutations: 64, Genes: 73, Seed availability: Yes. FN1492-S.SNP.12:12953484 chr12:012953484 0 W/12953484-12953484 FN1492-S Single Base Substitution T-C INTERGENIC Homo SNo: 1253, Mutant_ID: FN1492-S, Generation: M2, Mutations: 92, Genes: 12, Seed availability: Yes. FN2259-S.SNP.12:12961347 chr12:012961347 0 W/12961347-12961347 FN2259-S SNP G -> A AC=2;AN=190;BQB=0.930458;DP=5118;DP4=2293,2368,12,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.60835e-13;MQSB=0.999835;RPB=0.550619;SGB=-120.56;VDB=0.632968;EFF=INTERGENIC(MODIFIER||||||||||1) FN3833-S.SNP.12:12965107 chr12:012965107 0 W/12965107-12965107 FN3833-S SNP C -> T AC=1;AN=190;BQB=0.995173;DP=2134;DP4=1139,910,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61502e-06;MQSB=0.423389;RPB=0.977122;SGB=25.439;VDB=0.262342;EFF=INTERGENIC(MODIFIER||||||||||1) FN3835-S.SNP.12:12968111 chr12:012968111 0 W/12968111-12968111 FN3835-S SNP A -> C AC=1;AN=190;BQB=0.994117;DP=2723;DP4=1362,1232,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.47782e-05;MQSB=0.967192;RPB=0.992725;SGB=35.4339;VDB=0.0538244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.12:12970285 chr12:012970285 0 W/12970285-12970285 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.993256;DP=4394;DP4=2141,1871,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.317e-11;MQSB=0.29885;RPB=0.779551;SGB=76.4186;VDB=0.953039;EFF=INTERGENIC(MODIFIER||||||||||1) FN1651-S.SNP.12:12972810 chr12:012972810 0 W/12972810-12972810 FN1651-S Single Base Substitution T-A INTERGENIC HET SNo: 1355, Mutant_ID: FN1651-S, Generation: M2, Mutations: 69, Genes: 32, Seed availability: Yes. FN4064-S.SNP.12:12976204 chr12:012976204 0 W/12976204-12976204 FN4064-S SNP T -> C AC=1;AN=168;BQB=0.909731;DP=2687;DP4=1297,1304,7,3;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.65379e-06;MQSB=0.972548;RPB=0.327029;SGB=38.8805;VDB=0.285391;EFF=INTERGENIC(MODIFIER||||||||||1) FN1016-S.SNP.12:12977453 chr12:012977453 0 W/12977453-12977453 FN1016-S Single Base Substitution C-T INTERGENIC HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN1022-S.SNP.12:12979241 chr12:012979241 0 W/12979241-12979241 FN1022-S Single Base Substitution T-A INTERGENIC HET SNo: 918, Mutant_ID: FN1022-S, Generation: M2, Mutations: 105, Genes: 81, Seed availability: Yes. FN403-S.SNP.12:12989185 chr12:012989185 0 W/12989185-12989185 FN403-S Single Base Substitution C-T INTRON HET SNo: 393, Mutant_ID: FN403-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN547-S.SNP.12:12989616 chr12:012989616 0 W/12989616-12989616 FN547-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN_N1-220-1.SNP.12:12991362 chr12:012991362 0 W/12991362-12991362 FN_N1-220-1 Single Base Substitution C-G HET LOC_Os12g22980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1392, Mutant_ID: FN_N1-220-1, Generation: M3, Mutations: 47, Genes: 8, Seed availability: Yes. FN950-S.SNP.12:12991760 chr12:012991760 0 W/12991760-12991760 FN950-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g22980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN3484-S.SNP.12:12991841 chr12:012991841 0 W/12991841-12991841 FN3484-S SNP G -> A AC=1;AN=184;BQB=0.897159;DP=3104;DP4=1400,1635,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.09917e-09;MQSB=0.997268;RPB=0.307349;SGB=62.3078;VDB=0.177657;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A496T|721|LOC_Os12g22980|protein_coding|CODING|LOC_Os12g22980.1|3|1) FN478-S.SNP.12:13001124 chr12:013001124 0 W/13001124-13001124 FN478-S Single Base Substitution G-A INTRON HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3967-S.SNP.12:13011612 chr12:013011612 0 W/13011612-13011612 FN3967-S SNP C -> T AC=1;AN=182;BQB=0.971755;DP=2954;DP4=1281,1494,15,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.53479e-13;MQSB=0.968729;RPB=0.461562;SGB=120.796;VDB=0.363049;EFF=INTERGENIC(MODIFIER||||||||||1) FN2151-S.SNP.12:13017811 chr12:013017811 0 W/13017811-13017811 FN2151-S SNP C -> G AC=1;AN=168;BQB=0.334567;DP=3893;DP4=1866,1980,16,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00205497;MQB=1.72528e-15;MQSB=0.378943;RPB=0.223895;SGB=24.2221;VDB=0.0307747;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Cct|A885P|1005|LOC_Os12g23030|protein_coding|CODING|LOC_Os12g23030.1|7|1) FN2691-S.SNP.12:13019257 chr12:013019257 0 W/13019257-13019257 FN2691-S SNP T -> A AC=1;AN=200;BQB=0.348131;DP=4767;DP4=2304,2290,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.54672e-12;MQSB=0.96961;RPB=0.452427;SGB=77.2904;VDB=0.209288;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAa/cTa|Q562L|1005|LOC_Os12g23030|protein_coding|CODING|LOC_Os12g23030.1|4|1) FN2691-S.SNP.12:13019258 chr12:013019258 0 W/13019258-13019258 FN2691-S SNP G -> T AC=1;AN=200;BQB=0.627603;DP=4746;DP4=2247,2287,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.80007e-13;MQSB=0.954231;RPB=0.475176;SGB=37.3004;VDB=0.220177;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Caa/Aaa|Q562K|1005|LOC_Os12g23030|protein_coding|CODING|LOC_Os12g23030.1|4|1) FN2688-S.SNP.12:13020779 chr12:013020779 0 W/13020779-13020779 FN2688-S SNP T -> C AC=1;AN=200;BQB=0.913272;DP=5415;DP4=2982,2218,14,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00277008;MQB=1.54202e-08;MQSB=8.37296e-13;RPB=0.0435015;SGB=11.0951;VDB=0.00574701;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S202|1005|LOC_Os12g23030|protein_coding|CODING|LOC_Os12g23030.1|2|1) FN4173-S.SNP.12:13020847 chr12:013020847 0 W/13020847-13020847 FN4173-S SNP G -> A AC=2;AN=170;BQB=0.996078;DP=2504;DP4=1166,1254,9,14;HOB=0.0232526;ICB=0.494188;MQ=47;MQ0F=0.0115815;MQB=1.51883e-08;MQSB=0.722248;RPB=0.984532;SGB=96.7413;VDB=0.592406;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R180*|1005|LOC_Os12g23030|protein_coding|CODING|LOC_Os12g23030.1|2|1);LOF=(LOC_Os12g23030|LOC_Os12g23030|1|1.00);NMD=(LOC_Os12g23030|LOC_Os12g23030|1|1.00) W423-5-1.SNP.12:13026237 chr12:013026237 0 W/13026237-13026237 W423-5-1 Single Base Substitution T-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g23040 transposon protein, putative, Mutator sub-class, expressed SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2458.SNP.12:13027663 chr12:013027663 0 W/13027663-13027663 FN2458 SNP T -> C AC=1;AN=200;BQB=0.900178;DP=4471;DP4=2086,2121,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.23189e-08;MQSB=0.708163;RPB=0.466353;SGB=36.6644;VDB=0.445805;EFF=SYNONYMOUS_CODING(LOW|SILENT|acT/acC|T441|600|LOC_Os12g23040|protein_coding|CODING|LOC_Os12g23040.1|9|1) FN2110-S.SNP.12:13027978 chr12:013027978 0 W/13027978-13027978 FN2110-S SNP G -> T AC=1;AN=168;BQB=0.359562;DP=3869;DP4=2084,1751,11,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.01945e-11;MQSB=0.941279;RPB=0.951382;SGB=31.908;VDB=0.935976;EFF=INTRON(MODIFIER||||600|LOC_Os12g23040|protein_coding|CODING|LOC_Os12g23040.1|10|1) FN2240-S.SNP.12:13030660 chr12:013030660 0 W/13030660-13030660 FN2240-S SNP A -> C AC=1;AN=190;BQB=0.981693;DP=4982;DP4=2421,2315,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.55798e-09;MQSB=0.657609;RPB=0.0738079;SGB=80.9724;VDB=0.653326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.12:13031360 chr12:013031360 0 W/13031360-13031360 FN2687-S SNP A -> T AC=1;AN=200;BQB=0.778667;DP=4643;DP4=2307,2087,14,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000430756;MQB=8.38292e-12;MQSB=0.257422;RPB=0.918992;SGB=76.3213;VDB=0.0973442;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.12:13038517 chr12:013038517 0 W/13038517-13038517 FN564-S Single Base Substitution C-T INTRON HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN425-S.SNP.12:13040224 chr12:013040224 0 W/13040224-13040224 FN425-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN2267-S.SNP.12:13041161 chr12:013041161 0 W/13041161-13041161 FN2267-S SNP T -> A AC=1;AN=190;BQB=0.913185;DP=4042;DP4=2123,1656,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000247402;MQB=6.29439e-08;MQSB=0.279423;RPB=0.889344;SGB=28.7675;VDB=0.830973;EFF=INTERGENIC(MODIFIER||||||||||1) FN-412.SNP.12:13045669 chr12:013045669 0 W/13045669-13045669 FN-412 Single Base Substitution T-G INTERGENIC HET SNo: 410, Mutant_ID: FN-412, Generation: M2, Mutations: 50, Genes: 69, Seed availability: Yes. FN-364.SNP.12:13046421 chr12:013046421 0 W/13046421-13046421 FN-364 Single Base Substitution T-A INTERGENIC HET SNo: 353, Mutant_ID: FN-364, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3828-S.SNP.12:13051218 chr12:013051218 0 W/13051218-13051218 FN3828-S SNP T -> C AC=1;AN=190;BQB=0.998679;DP=2732;DP4=1210,1323,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.62929e-06;MQSB=0.962595;RPB=0.85615;SGB=8.33661;VDB=0.752987;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.12:13053670 chr12:013053670 0 W/13053670-13053670 FN680-S Single Base Substitution A-G INTERGENIC HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN1202-S.SNP.12:13053707 chr12:013053707 0 W/13053707-13053707 FN1202-S Single Base Substitution C-T INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3393-S.SNP.12:13058545 chr12:013058545 0 W/13058545-13058545 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.912554;DP=2727;DP4=1355,1300,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.29533e-06;MQSB=0.991582;RPB=0.71917;SGB=35.1773;VDB=0.611432;EFF=INTERGENIC(MODIFIER||||||||||1) FN1546-S.SNP.12:13059643 chr12:013059643 0 W/13059643-13059643 FN1546-S Single Base Substitution G-A INTERGENIC HET SNo: 1293, Mutant_ID: FN1546-S, Generation: M2, Mutations: 64, Genes: 16, Seed availability: Yes. FN2086-S.SNP.12:13061048 chr12:013061048 0 W/13061048-13061048 FN2086-S SNP C -> T AC=2;AN=168;BQB=0.32166;DP=3538;DP4=2340,1050,61,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=9.28238e-17;MQSB=0.744846;RPB=0.49844;SGB=-347.518;VDB=0.45043;EFF=INTRON(MODIFIER||||646|LOC_Os12g23100|protein_coding|CODING|LOC_Os12g23100.1|1|1) FN1221-S.SNP.12:13071528 chr12:013071528 0 W/13071528-13071528 FN1221-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g23120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2648-S.SNP.12:13074191 chr12:013074191 0 W/13074191-13074191 FN2648-S SNP C -> T AC=1;AN=200;BQB=0.0569703;DP=4647;DP4=2052,2354,5,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00344308;MQB=9.51851e-09;MQSB=0.0422821;RPB=0.0550679;SGB=-35.7104;VDB=0.00204909;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R237H|1423|LOC_Os12g23120|protein_coding|CODING|LOC_Os12g23120.1|3|1) FN3376-S.SNP.12:13077372 chr12:013077372 0 W/13077372-13077372 FN3376-S SNP C -> T AC=1;AN=184;BQB=0.975526;DP=3380;DP4=1547,1600,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.016568;MQB=0.0219509;MQSB=4.71409e-25;RPB=0.601322;SGB=39.2697;VDB=0.266504;EFF=INTERGENIC(MODIFIER||||||||||1) FN-252.SNP.12:13078553 chr12:013078553 0 W/13078553-13078553 FN-252 Single Base Substitution C-T INTERGENIC HET SNo: 251, Mutant_ID: FN-252, Generation: M2, Mutations: 53, Genes: 18, Seed availability: Yes. FN429-S.SNP.12:13078840 chr12:013078840 0 W/13078840-13078840 FN429-S Single Base Substitution G-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN931-S.SNP.12:13081729 chr12:013081729 0 W/13081729-13081729 FN931-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN3398-S.SNP.12:13082873 chr12:013082873 0 W/13082873-13082873 FN3398-S SNP C -> T AC=1;AN=184;BQB=0.678067;DP=2891;DP4=1430,1391,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.00415081;MQB=0.00514933;MQSB=0.152336;RPB=0.994989;SGB=25.7969;VDB=0.398125;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R721H|1243|LOC_Os12g23130|protein_coding|CODING|LOC_Os12g23130.1|3|1) FN1229-S.SNP.12:13083676 chr12:013083676 0 W/13083676-13083676 FN1229-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g23130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2439.SNP.12:13083824 chr12:013083824 0 W/13083824-13083824 FN2439 SNP A -> C AC=2;AN=200;BQB=0.855972;DP=4490;DP4=2297,1904,13,8;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000222717;MQB=1.14323e-09;MQSB=0.0902776;RPB=0.309041;SGB=91.1059;VDB=0.904198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttg/Gtg|L505V|1243|LOC_Os12g23130|protein_coding|CODING|LOC_Os12g23130.1|1|1) FN_543-2-6.SNP.12:13084735 chr12:013084735 0 W/13084735-13084735 FN_543-2-6 Single Base Substitution T-C Homo LOC_Os12g23130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN418-S.SNP.12:13089637 chr12:013089637 0 W/13089637-13089637 FN418-S Single Base Substitution G-A INTERGENIC HET SNo: 417, Mutant_ID: FN418-S, Generation: M2, Mutations: 72, Genes: 19, Seed availability: Yes. FN-184.SNP.12:13091663 chr12:013091663 0 W/13091663-13091663 FN-184 Single Base Substitution G-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN1443-S.SNP.12:13109040 chr12:013109040 0 W/13109040-13109040 FN1443-S Single Base Substitution A-G INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN-308.SNP.12:13109479 chr12:013109479 0 W/13109479-13109479 FN-308 Single Base Substitution A-G INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN3889-S.SNP.12:13112812 chr12:013112812 0 W/13112812-13112812 FN3889-S SNP A -> T AC=1;AN=158;BQB=0.948718;DP=2367;DP4=1065,1236,3,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.81954e-06;MQSB=0.970162;RPB=0.845256;SGB=33.9591;VDB=0.121227;EFF=INTRON(MODIFIER||||204|LOC_Os12g23190|protein_coding|CODING|LOC_Os12g23190.1|2|1) FN1453-S.SNP.12:13114755 chr12:013114755 0 W/13114755-13114755 FN1453-S Single Base Substitution G-A INTERGENIC HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN2656-S.SNP.12:13120896 chr12:013120896 0 W/13120896-13120896 FN2656-S SNP C -> A AC=2;AN=200;BQB=0.993178;DP=4401;DP4=2086,2051,34,35;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.0726e-39;MQSB=0.853846;RPB=0.968733;SGB=267.462;VDB=0.73503;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atT|M95I|128|LOC_Os12g23210|protein_coding|CODING|LOC_Os12g23210.1|1|1) FN2114-S.SNP.12:13128543 chr12:013128543 0 W/13128543-13128543 FN2114-S SNP A -> G AC=1;AN=168;BQB=0.576374;DP=3698;DP4=1602,2065,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.73925e-08;MQSB=0.000428664;RPB=0.902035;SGB=-38.3665;VDB=0.869731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.12:13133369 chr12:013133369 0 W/13133369-13133369 FN2789-S SNP G -> A AC=1;AN=186;BQB=0.850186;DP=3640;DP4=1894,1602,7,7;HOB=5.78101e-05;ICB=0.000116242;MQ=26;MQ0F=0.13956;MQB=0.987838;MQSB=8.00191e-06;RPB=0.722131;SGB=58.7391;VDB=0.700181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2380.SNP.12:13139910 chr12:013139910 0 W/13139910-13139910 FN2380 SNP G -> A AC=1;AN=192;BQB=0.0860103;DP=4957;DP4=2467,2109,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.115392;MQB=0.416698;MQSB=1.71737e-29;RPB=0.301458;SGB=-35.3278;VDB=0.31234;EFF=INTERGENIC(MODIFIER||||||||||1) FN1645-S.SNP.12:13158752 chr12:013158752 0 W/13158752-13158752 FN1645-S Single Base Substitution A-T INTERGENIC Homo SNo: 1350, Mutant_ID: FN1645-S, Generation: M2, Mutations: 64, Genes: 21, Seed availability: Yes. FN-187.SNP.12:13162973 chr12:013162973 0 W/13162973-13162973 FN-187 Single Base Substitution G-A INTRON HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN2375.SNP.12:13166211 chr12:013166211 0 W/13166211-13166211 FN2375 SNP T -> C AC=1;AN=192;BQB=0.338862;DP=5056;DP4=2483,2169,14,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.41292e-09;MQSB=0.957293;RPB=0.826551;SGB=15.1765;VDB=0.166376;EFF=INTERGENIC(MODIFIER||||||||||1) FN-160.SNP.12:13167244 chr12:013167244 0 W/13167244-13167244 FN-160 Single Base Substitution A-G INTERGENIC HOMO SNo: 160, Mutant_ID: FN-160, Generation: M2, Mutations: 51, Genes: 90, Seed availability: Yes. FN-292.SNP.12:13168326 chr12:013168326 0 W/13168326-13168326 FN-292 Single Base Substitution T-C INTERGENIC HOMO SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. FN4036-S.SNP.12:13168326 chr12:013168326 0 W/13168326-13168326 FN4036-S SNP T -> C AC=2;AN=168;BQB=0.976759;DP=2667;DP4=1458,1030,15,5;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=3.63614e-08;MQSB=0.495563;RPB=0.999137;SGB=58.7637;VDB=0.0823887;EFF=INTERGENIC(MODIFIER||||||||||1) FN970-S.SNP.12:13169986 chr12:013169986 0 W/13169986-13169986 FN970-S Single Base Substitution T-A INTERGENIC HET SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN2124-S.SNP.12:13172279 chr12:013172279 0 W/13172279-13172279 FN2124-S SNP G -> A AC=1;AN=168;BQB=0.00619708;DP=3967;DP4=1846,2065,24,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00025208;MQB=2.14647e-18;MQSB=0.879312;RPB=0.524084;SGB=-283.582;VDB=0.0196923;EFF=INTERGENIC(MODIFIER||||||||||1) FN1452-S.SNP.12:13173457 chr12:013173457 0 W/13173457-13173457 FN1452-S Single Base Substitution G-C INTERGENIC HET SNo: 1222, Mutant_ID: FN1452-S, Generation: M2, Mutations: 63, Genes: 162, Seed availability: Yes. FN751-S.SNP.12:13176929 chr12:013176929 0 W/13176929-13176929 FN751-S Single Base Substitution C-T INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN3323-S.SNP.12:13178504 chr12:013178504 0 W/13178504-13178504 FN3323-S SNP A -> T AC=1;AN=184;BQB=0.00589349;DP=2548;DP4=1403,703,9,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.19123e-12;MQSB=0.000810061;RPB=0.53921;SGB=-529.236;VDB=0.365651;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N201I|239|LOC_Os12g23280|protein_coding|CODING|LOC_Os12g23280.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N181I|219|LOC_Os12g23280|protein_coding|CODING|LOC_Os12g23280.3|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N187I|225|LOC_Os12g23280|protein_coding|CODING|LOC_Os12g23280.2|4|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aTc|N186I|224|LOC_Os12g23280|protein_coding|CODING|LOC_Os12g23280.4|4|1) FN_831-4-1.SNP.12:13182964 chr12:013182964 0 W/13182964-13182964 FN_831-4-1 Single Base Substitution G-A HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN_831-4-1.SNP.12:13182965 chr12:013182965 0 W/13182965-13182965 FN_831-4-1 Single Base Substitution C-A HET SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN2675-S.SNP.12:13186519 chr12:013186519 0 W/13186519-13186519 FN2675-S SNP C -> T AC=1;AN=200;BQB=0.927839;DP=4871;DP4=2400,2233,7,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.62523e-06;MQSB=0.982953;RPB=0.84657;SGB=13.8539;VDB=0.314843;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.12:13186904 chr12:013186904 0 W/13186904-13186904 FN3401-S SNP T -> C AC=1;AN=184;BQB=0.534845;DP=2742;DP4=1378,1125,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.87801e-10;MQSB=0.72322;RPB=0.653866;SGB=30.8405;VDB=0.394181;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.12:13187260 chr12:013187260 0 W/13187260-13187260 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.994306;DP=3044;DP4=1505,1369,19,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.27964e-15;MQSB=0.52504;RPB=0.712022;SGB=56.0583;VDB=0.921105;EFF=INTERGENIC(MODIFIER||||||||||1) FN4132-S.SNP.12:13189815 chr12:013189815 0 W/13189815-13189815 FN4132-S SNP T -> G AC=1;AN=182;BQB=0.85405;DP=2925;DP4=1441,1387,7,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.04671e-08;MQSB=0.988309;RPB=0.204165;SGB=53.1331;VDB=0.302225;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.12:13197792 chr12:013197792 0 W/13197792-13197792 FN2582-S SNP T -> G AC=1;AN=198;BQB=0.732902;DP=3990;DP4=1883,1845,12,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=3.64354e-09;MQSB=0.554238;RPB=0.909602;SGB=58.1246;VDB=0.965421;EFF=INTERGENIC(MODIFIER||||||||||1) FN1690-S.SNP.12:13198287 chr12:013198287 0 W/13198287-13198287 FN1690-S SNP T -> A AC=1;AN=188;BQB=0.0646599;DP=2189;DP4=649,1489,4,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.18271e-06;MQSB=0.614733;RPB=0.479803;SGB=2.45162;VDB=0.0398901;EFF=INTERGENIC(MODIFIER||||||||||1) FN3468-S.SNP.12:13205184 chr12:013205184 0 W/13205184-13205184 FN3468-S SNP G -> A AC=2;AN=184;BQB=0.997642;DP=3401;DP4=1426,1855,11,23;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.68466e-20;MQSB=0.998305;RPB=0.629911;SGB=109.705;VDB=0.174462;EFF=INTERGENIC(MODIFIER||||||||||1) FN3940-S.SNP.12:13210178 chr12:013210178 0 W/13210178-13210178 FN3940-S SNP A -> T AC=1;AN=158;BQB=0.947868;DP=3104;DP4=1479,1482,13,5;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.61977e-10;MQSB=0.51816;RPB=0.989973;SGB=50.9207;VDB=0.892877;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTa/aAa|I92K|145|LOC_Os12g23330|protein_coding|CODING|LOC_Os12g23330.1|1|1) FN2455.SNP.12:13210706 chr12:013210706 0 W/13210706-13210706 FN2455 SNP C -> T AC=1;AN=200;BQB=0.562788;DP=4432;DP4=2280,1940,9,1;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.63896e-05;MQSB=0.838199;RPB=0.999949;SGB=25.849;VDB=0.409296;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.12:13210823 chr12:013210823 0 W/13210823-13210823 FN1389-S Single Base Substitution C-T INTERGENIC Homo SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN1421-S.SNP.12:13211905 chr12:013211905 0 W/13211905-13211905 FN1421-S Single Base Substitution C-T INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN1497-S.SNP.12:13217382 chr12:013217382 0 W/13217382-13217382 FN1497-S Single Base Substitution G-T STOP_GAINED Homo LOC_Os12g23350 retrotransposon protein, putative, unclassified, expressed SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN-222.SNP.12:13218327 chr12:013218327 0 W/13218327-13218327 FN-222 Single Base Substitution A-C INTERGENIC HET SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. W463-2-1.SNP.12:13219902 chr12:013219902 0 W/13219902-13219902 W463-2-1 Single Base Substitution C-T INTRON HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN1227-S.SNP.12:13220302 chr12:013220302 0 W/13220302-13220302 FN1227-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g23360 retrotransposon protein, putative, unclassified SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN1718-S.SNP.12:13221718 chr12:013221718 0 W/13221718-13221718 FN1718-S SNP T -> C AC=1;AN=188;BQB=0.00588864;DP=3701;DP4=1944,1713,14,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.16966e-12;MQSB=0.615789;RPB=0.999658;SGB=-40.5615;VDB=0.788418;EFF=INTERGENIC(MODIFIER||||||||||1) FN1761-S.SNP.12:13221775 chr12:013221775 0 W/13221775-13221775 FN1761-S SNP T -> C AC=1;AN=188;BQB=0.182649;DP=3691;DP4=1821,1828,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.07592e-10;MQSB=0.230434;RPB=0.108245;SGB=-38.278;VDB=0.139273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.12:13222979 chr12:013222979 0 W/13222979-13222979 FN2721-S SNP G -> A AC=2;AN=200;BQB=0.794511;DP=4263;DP4=2013,2025,9,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000234577;MQB=1.49456e-12;MQSB=0.932153;RPB=0.785559;SGB=95.7111;VDB=0.806733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.12:13226138 chr12:013226138 0 W/13226138-13226138 FN3345-S SNP C -> T AC=2;AN=184;BQB=0.826797;DP=3515;DP4=1607,1780,24,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.20155e-20;MQSB=0.993558;RPB=0.972625;SGB=143.7;VDB=0.60104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G303R|818|LOC_Os12g23374|protein_coding|CODING|LOC_Os12g23374.1|3|1) FN2261-S.SNP.12:13226471 chr12:013226471 0 W/13226471-13226471 FN2261-S SNP C -> T AC=1;AN=190;BQB=0.929667;DP=4767;DP4=2118,2321,25,24;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000419551;MQB=5.28028e-25;MQSB=0.145797;RPB=0.863735;SGB=217.589;VDB=0.244104;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E192K|818|LOC_Os12g23374|protein_coding|CODING|LOC_Os12g23374.1|3|1) FN2756-S.SNP.12:13234893 chr12:013234893 0 W/13234893-13234893 FN2756-S SNP T -> A AC=2;AN=200;BQB=0.986814;DP=4724;DP4=2245,2282,28,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.72932e-28;MQSB=0.898229;RPB=0.999623;SGB=159.24;VDB=0.889839;EFF=INTERGENIC(MODIFIER||||||||||1) FN1104-S.SNP.12:13235027 chr12:013235027 0 W/13235027-13235027 FN1104-S Single Base Substitution T-G INTERGENIC HET SNo: 979, Mutant_ID: FN1104-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1466-S.SNP.12:13238514 chr12:013238514 0 W/13238514-13238514 FN1466-S Single Base Substitution A-T INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN3331-S.SNP.12:13239727 chr12:013239727 0 W/13239727-13239727 FN3331-S SNP G -> C AC=2;AN=184;BQB=0.641577;DP=3356;DP4=1949,1185,18,15;HOB=0.0215028;ICB=0.494625;MQ=35;MQ0F=0.0765793;MQB=0.332807;MQSB=0;RPB=0.521843;SGB=-43.8817;VDB=0.463996;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.12:13240971 chr12:013240971 0 W/13240971-13240971 FN1279-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3322-S.SNP.12:13251280 chr12:013251280 0 W/13251280-13251280 FN3322-S SNP A -> G AC=2;AN=184;BQB=0.891956;DP=3079;DP4=1273,1563,8,13;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.00259825;MQB=2.9596e-10;MQSB=0.747201;RPB=0.344272;SGB=12.8895;VDB=0.255181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.12:13258698 chr12:013258698 0 W/13258698-13258698 FN2329 SNP C -> T AC=1;AN=192;BQB=0.0270387;DP=4641;DP4=2359,2020,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000215471;MQB=2.73771e-06;MQSB=0.920533;RPB=0.922351;SGB=-36.6348;VDB=0.750287;EFF=INTRON(MODIFIER||||1613|LOC_Os12g23440|protein_coding|CODING|LOC_Os12g23440.1|4|1) FN4038-S.SNP.12:13259548 chr12:013259548 0 W/13259548-13259548 FN4038-S SNP C -> T AC=2;AN=168;BQB=0.998685;DP=2668;DP4=1083,1442,15,37;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.0366e-24;MQSB=0.975532;RPB=0.462676;SGB=219.56;VDB=0.983008;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L71|1613|LOC_Os12g23440|protein_coding|CODING|LOC_Os12g23440.1|2|1) FN1286-S.SNP.12:13259628 chr12:013259628 0 W/13259628-13259628 FN1286-S Single Base Substitution C-G INTRON HET SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN2353.SNP.12:13261819 chr12:013261819 0 W/13261819-13261819 FN2353 SNP G -> A AC=1;AN=192;BQB=0.437096;DP=4444;DP4=1876,2232,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00360036;MQB=0.000998718;MQSB=0.981214;RPB=0.330767;SGB=61.1661;VDB=0.808165;EFF=INTERGENIC(MODIFIER||||||||||1) FN3909-S.SNP.12:13262122 chr12:013262122 0 W/13262122-13262122 FN3909-S SNP C -> T AC=1;AN=158;BQB=0.995067;DP=1923;DP4=759,1070,6,10;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00156006;MQB=0.00082412;MQSB=0.0445478;RPB=0.618747;SGB=64.5449;VDB=0.0617598;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.12:13264807 chr12:013264807 0 W/13264807-13264807 FN3332-S SNP G -> T AC=1;AN=182;BQB=0.960676;DP=3310;DP4=1292,1785,4,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.14381e-09;MQSB=0.173424;RPB=0.744502;SGB=42.7914;VDB=0.633655;EFF=INTERGENIC(MODIFIER||||||||||1) FN3332-S.SNP.12:13264808 chr12:013264808 0 W/13264808-13264808 FN3332-S SNP G -> T AC=1;AN=182;BQB=0.598603;DP=3302;DP4=1368,1774,8,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.12197e-12;MQSB=0.0821266;RPB=0.514872;SGB=33.3622;VDB=0.228299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.12:13267692 chr12:013267692 0 W/13267692-13267692 FN2755-S SNP C -> T AC=1;AN=200;BQB=0.717555;DP=4853;DP4=2469,2079,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.09657e-12;MQSB=0.972849;RPB=0.0820654;SGB=17.5158;VDB=0.682143;EFF=SPLICE_SITE_REGION(LOW||||405|LOC_Os12g23450|protein_coding|CODING|LOC_Os12g23450.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V352|405|LOC_Os12g23450|protein_coding|CODING|LOC_Os12g23450.1|4|1) FN3657-S.SNP.12:13273438 chr12:013273438 0 W/13273438-13273438 FN3657-S SNP C -> T AC=1;AN=190;BQB=0.688965;DP=2644;DP4=1337,1228,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000229157;MQSB=0.854217;RPB=0.979263;SGB=18.3316;VDB=0.98831;EFF=INTRON(MODIFIER||||137|LOC_Os12g23470|protein_coding|CODING|LOC_Os12g23470.1|2|1) FN2765-S.SNP.12:13278861 chr12:013278861 0 W/13278861-13278861 FN2765-S SNP T -> A AC=1;AN=198;BQB=0.825446;DP=4140;DP4=1930,2040,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000483092;MQB=1.02464e-11;MQSB=0.983183;RPB=0.335761;SGB=65.3149;VDB=0.388118;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.12:13278862 chr12:013278862 0 W/13278862-13278862 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.996685;DP=4130;DP4=1872,1990,14,7;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000242131;MQB=1.23485e-10;MQSB=0.997544;RPB=0.145875;SGB=65.3149;VDB=0.282595;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.12:13289559 chr12:013289559 0 W/13289559-13289559 FN4147-S SNP G -> A AC=2;AN=170;BQB=0.853203;DP=2475;DP4=1178,1212,13,11;HOB=0.0232526;ICB=0.494188;MQ=46;MQ0F=0.0238384;MQB=9.27716e-07;MQSB=0.70061;RPB=0.994693;SGB=72.7472;VDB=0.39118;EFF=INTERGENIC(MODIFIER||||||||||1) FN735-S.SNP.12:13291923 chr12:013291923 0 W/13291923-13291923 FN735-S Single Base Substitution A-G INTERGENIC HOMO SNo: 660, Mutant_ID: FN735-S, Generation: M2, Mutations: 58, Genes: 14, Seed availability: Yes. FN2361.SNP.12:13293764 chr12:013293764 0 W/13293764-13293764 FN2361 SNP G -> A AC=1;AN=192;BQB=0.320695;DP=4565;DP4=2026,2098,13,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.88299e-13;MQSB=0.815545;RPB=0.618024;SGB=46.8644;VDB=0.246986;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T85M|225|LOC_Os12g23510|protein_coding|CODING|LOC_Os12g23510.1|1|1) FN2361.SNP.12:13293767 chr12:013293767 0 W/13293767-13293767 FN2361 SNP G -> A AC=1;AN=192;BQB=0.627159;DP=4536;DP4=2048,2111,13,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.71126e-15;MQSB=0.769399;RPB=0.901301;SGB=99.4183;VDB=0.330916;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A84V|225|LOC_Os12g23510|protein_coding|CODING|LOC_Os12g23510.1|1|1) FN2361.SNP.12:13293768 chr12:013293768 0 W/13293768-13293768 FN2361 SNP C -> A AC=1;AN=192;BQB=0.338903;DP=4549;DP4=2072,2209,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.62495e-14;MQSB=0.576778;RPB=0.904121;SGB=94.8539;VDB=0.227536;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A84S|225|LOC_Os12g23510|protein_coding|CODING|LOC_Os12g23510.1|1|1) FN1430-S.SNP.12:13294485 chr12:013294485 0 W/13294485-13294485 FN1430-S Single Base Substitution G-A INTERGENIC HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN514-S.SNP.12:13302370 chr12:013302370 0 W/13302370-13302370 FN514-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g23520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2171-S.SNP.12:13306165 chr12:013306165 0 W/13306165-13306165 FN2171-S SNP T -> C AC=1;AN=168;BQB=0.524728;DP=3820;DP4=2002,1761,12,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.92995e-12;MQSB=0.97341;RPB=0.363248;SGB=-11.926;VDB=0.38299;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V565A|1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|4|1) FN2749-S.SNP.12:13307186 chr12:013307186 0 W/13307186-13307186 FN2749-S SNP T -> C AC=1;AN=200;BQB=0.972206;DP=4989;DP4=2367,2428,8,2;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.35154e-07;MQSB=0.753451;RPB=0.388201;SGB=25.849;VDB=0.218005;EFF=INTRON(MODIFIER||||1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|5|1) FN1658-S.SNP.12:13311053 chr12:013311053 0 W/13311053-13311053 FN1658-S SNP C -> A AC=1;AN=188;BQB=0.82373;DP=1447;DP4=820,592,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.31012e-05;MQSB=0.99685;RPB=0.634263;SGB=14.7255;VDB=0.140844;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S1083|1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|11|1) FN2118-S.SNP.12:13311053 chr12:013311053 0 W/13311053-13311053 FN2118-S SNP C -> A AC=2;AN=168;BQB=0.998853;DP=1911;DP4=1013,831,13,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.07615e-14;MQSB=0.972846;RPB=0.291331;SGB=109.773;VDB=0.275629;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S1083|1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|11|1) FN3557-S.SNP.12:13311053 chr12:013311053 0 W/13311053-13311053 FN3557-S SNP C -> A AC=2;AN=188;BQB=0.889115;DP=4125;DP4=2195,1811,29,28;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.53088e-34;MQSB=0.99243;RPB=0.959317;SGB=253.427;VDB=0.591143;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcA|S1083|1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|11|1) FN811-S.SNP.12:13311053 chr12:013311053 0 W/13311053-13311053 FN811-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 729, Mutant_ID: FN811-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN598-S.SNP.12:13311519 chr12:013311519 0 W/13311519-13311519 FN598-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2089-S.SNP.12:13311543 chr12:013311543 0 W/13311543-13311543 FN2089-S SNP G -> A AC=2;AN=168;BQB=0.284067;DP=2313;DP4=1222,1022,22,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.78946e-18;MQSB=0.99853;RPB=0.957903;SGB=-25.5226;VDB=0.684997;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1213S|1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|12|1) FN2625-S.SNP.12:13315149 chr12:013315149 0 W/13315149-13315149 FN2625-S SNP G -> A AC=1;AN=200;BQB=0.391144;DP=4893;DP4=2304,2271,14,13;HOB=5e-05;ICB=0.0001005;MQ=18;MQ0F=0.132434;MQB=0.63057;MQSB=5.63744e-05;RPB=0.22885;SGB=55.5366;VDB=0.424726;EFF=INTRON(MODIFIER||||1846|LOC_Os12g23520|protein_coding|CODING|LOC_Os12g23520.1|15|1) FN2531-S.SNP.12:13317760 chr12:013317760 0 W/13317760-13317760 FN2531-S SNP A -> T AC=1;AN=194;BQB=0.249492;DP=3383;DP4=1350,1849,8,9;HOB=5.31406e-05;ICB=0.000106829;MQ=34;MQ0F=0.070943;MQB=0.905587;MQSB=0;RPB=0.991916;SGB=72.5245;VDB=0.908107;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K98M|540|LOC_Os12g23530|protein_coding|CODING|LOC_Os12g23530.1|3|1) FN633-S.SNP.12:13319040 chr12:013319040 0 W/13319040-13319040 FN633-S Single Base Substitution G-C INTRON HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN474-S.SNP.12:13321587 chr12:013321587 0 W/13321587-13321587 FN474-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g23530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN1217-S.SNP.12:13322949 chr12:013322949 0 W/13322949-13322949 FN1217-S Single Base Substitution C-T INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1270-S.SNP.12:13324732 chr12:013324732 0 W/13324732-13324732 FN1270-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g23540 retrotransposon protein, putative, unclassified, expressed SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN1686-S.SNP.12:13335636 chr12:013335636 0 W/13335636-13335636 FN1686-S SNP T -> A AC=1;AN=188;BQB=0.744719;DP=3106;DP4=1355,1710,17,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.37039e-14;MQSB=0.853232;RPB=0.995125;SGB=-42.845;VDB=0.546139;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.12:13338271 chr12:013338271 0 W/13338271-13338271 FN4260-S SNP C -> T AC=1;AN=170;BQB=0.925596;DP=2694;DP4=1306,1307,11,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.95947e-13;MQSB=0.974173;RPB=0.790997;SGB=87.856;VDB=0.0363857;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I310|421|LOC_Os12g23560|protein_coding|CODING|LOC_Os12g23560.1|2|1) FN440-S.SNP.12:13339089 chr12:013339089 0 W/13339089-13339089 FN440-S Single Base Substitution C-A INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN2557-S.SNP.12:13346359 chr12:013346359 0 W/13346359-13346359 FN2557-S SNP A -> C AC=1;AN=192;BQB=0.572776;DP=4032;DP4=2090,1707,8,8;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0238095;MQB=0.243269;MQSB=5.79821e-10;RPB=0.733447;SGB=6.15916;VDB=0.158387;EFF=INTRON(MODIFIER||||153|LOC_Os12g23570|protein_coding|CODING|LOC_Os12g23570.1|3|1) FN3368-S.SNP.12:13347113 chr12:013347113 0 W/13347113-13347113 FN3368-S SNP A -> C AC=1;AN=182;BQB=0.954932;DP=3253;DP4=1647,1487,9,2;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.0166001;MQB=0.00099045;MQSB=0.221605;RPB=0.913928;SGB=44.2207;VDB=0.545839;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caG|H55Q|153|LOC_Os12g23570|protein_coding|CODING|LOC_Os12g23570.1|2|1) FN2304.SNP.12:13359822 chr12:013359822 0 W/13359822-13359822 FN2304 SNP G -> A AC=1;AN=192;BQB=0.556039;DP=9453;DP4=3970,4166,12,18;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.053528;MQB=0.157009;MQSB=0.00142933;RPB=0.999924;SGB=62.2505;VDB=0.909219;EFF=INTERGENIC(MODIFIER||||||||||1) FN3890-S.SNP.12:13364146 chr12:013364146 0 W/13364146-13364146 FN3890-S SNP C -> T AC=1;AN=158;BQB=0.661234;DP=3666;DP4=2057,1442,34,38;HOB=8.01154e-05;ICB=0.000161245;MQ=21;MQ0F=0.216312;MQB=0.901412;MQSB=6.54809e-07;RPB=0.99663;SGB=-379.26;VDB=0.318952;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G659|1758|LOC_Os12g23580|protein_coding|CODING|LOC_Os12g23580.1|3|1) FN4189-S.SNP.12:13370149 chr12:013370149 0 W/13370149-13370149 FN4189-S SNP T -> C AC=2;AN=170;BQB=0.989542;DP=2317;DP4=1349,850,14,8;HOB=0.0232526;ICB=0.494188;MQ=19;MQ0F=0.202417;MQB=0.253725;MQSB=0;RPB=0.0904072;SGB=92.2986;VDB=0.121456;EFF=INTRON(MODIFIER||||340|LOC_Os12g23590|protein_coding|CODING|LOC_Os12g23590.1|2|1) FN3511-S.SNP.12:13371033 chr12:013371033 0 W/13371033-13371033 FN3511-S SNP G -> T AC=1;AN=188;BQB=0.940749;DP=2996;DP4=1560,1365,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000333778;MQB=2.95655e-05;MQSB=0.999476;RPB=0.912354;SGB=30.8063;VDB=0.552214;EFF=INTRON(MODIFIER||||340|LOC_Os12g23590|protein_coding|CODING|LOC_Os12g23590.1|1|1) FN2362.SNP.12:13371106 chr12:013371106 0 W/13371106-13371106 FN2362 SNP G -> T AC=1;AN=192;BQB=0.999884;DP=4779;DP4=2235,2239,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00167399;MQB=1.68341e-12;MQSB=0.547987;RPB=0.0984288;SGB=41.7357;VDB=0.0348152;EFF=INTRON(MODIFIER||||340|LOC_Os12g23590|protein_coding|CODING|LOC_Os12g23590.1|1|1) FN-51.SNP.12:13374163 chr12:013374163 0 W/13374163-13374163 FN-51 Single Base Substitution C-T INTERGENIC HET SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN785-S.SNP.12:13389223 chr12:013389223 0 W/13389223-13389223 FN785-S Single Base Substitution C-G INTERGENIC HOMO SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN-232.SNP.12:13398439 chr12:013398439 0 W/13398439-13398439 FN-232 Single Base Substitution C-T INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN3843-S.SNP.12:13401712 chr12:013401712 0 W/13401712-13401712 FN3843-S SNP T -> C AC=1;AN=190;BQB=0.889684;DP=2691;DP4=1228,1357,3,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.94403e-07;MQSB=0.824424;RPB=0.294704;SGB=49.0954;VDB=0.527393;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.12:13410332 chr12:013410332 0 W/13410332-13410332 FN2333 SNP G -> C AC=1;AN=192;BQB=0.999684;DP=4843;DP4=2254,2221,11,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.35822e-13;MQSB=0.14008;RPB=0.796277;SGB=-6.8678;VDB=0.946445;EFF=INTERGENIC(MODIFIER||||||||||1) FN4305-S.SNP.12:13413089 chr12:013413089 0 W/13413089-13413089 FN4305-S SNP A -> G AC=1;AN=170;BQB=0.778497;DP=2216;DP4=1110,876,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=44;MQ0F=0.00676895;MQB=0.684314;MQSB=0.998266;RPB=0.822785;SGB=-1.43813;VDB=0.614492;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G45|95|LOC_Os12g23630|protein_coding|CODING|LOC_Os12g23630.1|1|1) FN1307-S.SNP.12:13414195 chr12:013414195 0 W/13414195-13414195 FN1307-S Single Base Substitution T-A INTERGENIC HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN3332-S.SNP.12:13415574 chr12:013415574 0 W/13415574-13415574 FN3332-S SNP C -> A AC=1;AN=182;BQB=0.976896;DP=2676;DP4=1358,1235,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.40487e-08;MQSB=0.964726;RPB=0.999395;SGB=66.8296;VDB=0.79708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3879-S.SNP.12:13416386 chr12:013416386 0 W/13416386-13416386 FN3879-S SNP T -> A AC=1;AN=158;BQB=0.475517;DP=2410;DP4=1219,1095,18,11;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00207469;MQB=1.29178e-09;MQSB=0.926726;RPB=0.818632;SGB=121.348;VDB=0.850245;EFF=INTERGENIC(MODIFIER||||||||||1) FN473-S.SNP.12:13417002 chr12:013417002 0 W/13417002-13417002 FN473-S Single Base Substitution C-T INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN473-S.SNP.12:13417191 chr12:013417191 0 W/13417191-13417191 FN473-S Single Base Substitution G-A INTERGENIC HET SNo: 472, Mutant_ID: FN473-S, Generation: M2, Mutations: 68, Genes: 20, Seed availability: Yes. FN2357.SNP.12:13419835 chr12:013419835 0 W/13419835-13419835 FN2357 SNP G -> T AC=2;AN=192;BQB=0.870387;DP=4563;DP4=2127,2084,26,31;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=4.72647e-28;MQSB=0.585103;RPB=0.996066;SGB=69.9287;VDB=0.754091;EFF=INTERGENIC(MODIFIER||||||||||1) FN2231-S.SNP.12:13420569 chr12:013420569 0 W/13420569-13420569 FN2231-S SNP G -> A AC=1;AN=190;BQB=0.558622;DP=4761;DP4=2352,1994,14,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.94452e-15;MQSB=0.71989;RPB=0.618286;SGB=-7.68321;VDB=0.991414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G138S|638|LOC_Os12g23640|protein_coding|CODING|LOC_Os12g23640.1|1|1) FN3766-S.SNP.12:13427800 chr12:013427800 0 W/13427800-13427800 FN3766-S SNP C -> T AC=1;AN=190;BQB=0.998075;DP=3297;DP4=1723,1458,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.49253e-07;MQSB=0.97468;RPB=0.709156;SGB=53.6492;VDB=0.183362;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G574E|1082|LOC_Os12g23660|protein_coding|CODING|LOC_Os12g23660.1|1|1) FN-4.SNP.12:13429451 chr12:013429451 0 W/13429451-13429451 FN-4 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os12g23660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN3607-S.SNP.12:13442219 chr12:013442219 0 W/13442219-13442219 FN3607-S SNP G -> A AC=1;AN=190;BQB=0.974078;DP=2193;DP4=972,1104,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.0001719;MQSB=0.0620072;RPB=0.477992;SGB=43.2083;VDB=0.537108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1056-S.SNP.12:13443567 chr12:013443567 0 W/13443567-13443567 FN1056-S Single Base Substitution C-T INTERGENIC HET SNo: 946, Mutant_ID: FN1056-S, Generation: M2, Mutations: 58, Genes: 20, Seed availability: Yes. FN3869-S.SNP.12:13445303 chr12:013445303 0 W/13445303-13445303 FN3869-S SNP G -> A AC=1;AN=158;BQB=0.999951;DP=2605;DP4=1430,1079,10,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.70237e-07;MQSB=0.996888;RPB=0.963963;SGB=34.0735;VDB=0.482286;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M231I|327|LOC_Os12g23700|protein_coding|CODING|LOC_Os12g23700.1|1|1) FN3871-S.SNP.12:13446113 chr12:013446113 0 W/13446113-13446113 FN3871-S SNP A -> G AC=2;AN=158;BQB=0.963255;DP=2711;DP4=1098,1361,9,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.6724e-16;MQSB=0.587664;RPB=0.598242;SGB=64.0993;VDB=0.84688;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.12:13450392 chr12:013450392 0 W/13450392-13450392 FN3516-S SNP G -> A AC=1;AN=188;BQB=0.60915;DP=3002;DP4=1282,1593,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.18753e-08;MQSB=0.945971;RPB=0.99465;SGB=39.5275;VDB=0.630944;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.12:13452179 chr12:013452179 0 W/13452179-13452179 FN-248 Single Base Substitution G-C INTERGENIC HET SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN-172.SNP.12:13452891 chr12:013452891 0 W/13452891-13452891 FN-172 Single Base Substitution C-T INTERGENIC HOMO SNo: 172, Mutant_ID: FN-172, Generation: M2, Mutations: 54, Genes: 3, Seed availability: Yes. FN2081-S.SNP.12:13453602 chr12:013453602 0 W/13453602-13453602 FN2081-S SNP G -> T AC=2;AN=168;BQB=0.0477347;DP=2010;DP4=674,1226,14,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.15698e-15;MQSB=0.998219;RPB=0.994676;SGB=106.795;VDB=0.546574;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.12:13454566 chr12:013454566 0 W/13454566-13454566 FN670-S Single Base Substitution G-A INTRON HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN950-S.SNP.12:13458078 chr12:013458078 0 W/13458078-13458078 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN3651-S.SNP.12:13458967 chr12:013458967 0 W/13458967-13458967 FN3651-S SNP G -> C AC=1;AN=190;BQB=0.912046;DP=2624;DP4=1295,1228,8,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000762195;MQB=5.97891e-06;MQSB=0.741536;RPB=0.0353835;SGB=44.5415;VDB=0.142881;EFF=INTERGENIC(MODIFIER||||||||||1) FN1718-S.SNP.12:13460213 chr12:013460213 0 W/13460213-13460213 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.0476543;DP=3829;DP4=1402,2360,12,16;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00156699;MQB=6.27616e-06;MQSB=0.0173664;RPB=0.746017;SGB=-41.0182;VDB=0.629715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2711-S.SNP.12:13462449 chr12:013462449 0 W/13462449-13462449 FN2711-S SNP C -> A AC=1;AN=200;BQB=0.202218;DP=5179;DP4=2654,2175,9,47;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.184399;MQB=4.18841e-08;MQSB=7.50717e-07;RPB=2.00022e-15;SGB=-1686.92;VDB=0.00521142;EFF=INTERGENIC(MODIFIER||||||||||1) FN3285-S.SNP.12:13462495 chr12:013462495 0 W/13462495-13462495 FN3285-S SNP A -> T AC=1;AN=182;BQB=0.861377;DP=3461;DP4=1655,1590,8,12;HOB=6.03792e-05;ICB=0.000121422;MQ=43;MQ0F=0.0106906;MQB=1.02239e-08;MQSB=0.944887;RPB=0.787314;SGB=60.4004;VDB=0.679639;EFF=INTERGENIC(MODIFIER||||||||||1) FN1547-S.SNP.12:13468623 chr12:013468623 0 W/13468623-13468623 FN1547-S Single Base Substitution C-T INTERGENIC Homo SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN3629-S.SNP.12:13469108 chr12:013469108 0 W/13469108-13469108 FN3629-S SNP C -> T AC=2;AN=190;BQB=0.754077;DP=3043;DP4=1545,1315,13,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.72633e-14;MQSB=0.223428;RPB=0.80122;SGB=92.9626;VDB=0.38734;EFF=INTERGENIC(MODIFIER||||||||||1) FN-327.SNP.12:13475529 chr12:013475529 0 W/13475529-13475529 FN-327 Single Base Substitution C-T INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN-327.SNP.12:13475530 chr12:013475530 0 W/13475530-13475530 FN-327 Single Base Substitution G-T INTERGENIC HOMO SNo: 320, Mutant_ID: FN-327, Generation: M2, Mutations: 42, Genes: 36, Seed availability: Yes. FN-203.SNP.12:13479946 chr12:013479946 0 W/13479946-13479946 FN-203 Single Base Substitution G-T INTERGENIC HET SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-226.SNP.12:13481281 chr12:013481281 0 W/13481281-13481281 FN-226 Single Base Substitution T-A INTERGENIC HET SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN3796-S.SNP.12:13485218 chr12:013485218 0 W/13485218-13485218 FN3796-S SNP G -> A AC=1;AN=190;BQB=0.914968;DP=3482;DP4=1683,1694,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.93115e-08;MQSB=0.737096;RPB=0.242017;SGB=62.7569;VDB=0.117602;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.12:13485303 chr12:013485303 0 W/13485303-13485303 FN2791-S SNP C -> A AC=1;AN=186;BQB=0.216471;DP=3752;DP4=1722,1682,4,18;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=5.48439e-10;MQSB=0.251567;RPB=0.828531;SGB=95.5;VDB=0.993199;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.12:13486085 chr12:013486085 0 W/13486085-13486085 FN1241-S Single Base Substitution G-A INTERGENIC HET SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-361.SNP.12:13493944 chr12:013493944 0 W/13493944-13493944 FN-361 Single Base Substitution A-T INTRON HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN884-S.SNP.12:13501546 chr12:013501546 0 W/13501546-13501546 FN884-S Single Base Substitution A-G INTRON HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN1504-S.SNP.12:13501698 chr12:013501698 0 W/13501698-13501698 FN1504-S Single Base Substitution G-A INTRON HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN4271-S.SNP.12:13504013 chr12:013504013 0 W/13504013-13504013 FN4271-S SNP C -> T AC=2;AN=170;BQB=0.934866;DP=2545;DP4=1199,1276,9,12;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.51741e-11;MQSB=0.999281;RPB=0.739223;SGB=87.856;VDB=0.677522;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A631V|985|LOC_Os12g23770|protein_coding|CODING|LOC_Os12g23770.1|2|1) FN2240-S.SNP.12:13509693 chr12:013509693 0 W/13509693-13509693 FN2240-S SNP T -> C AC=1;AN=190;BQB=0.387596;DP=4175;DP4=1901,1993,7,13;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000239521;MQB=0.000186868;MQSB=1.20677e-06;RPB=0.728341;SGB=36.4291;VDB=0.0697235;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.12:13531304 chr12:013531304 0 W/13531304-13531304 FN4141-S SNP C -> T AC=1;AN=170;BQB=0.956162;DP=2778;DP4=1262,1436,9,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2182e-08;MQSB=0.475671;RPB=0.998249;SGB=19.8839;VDB=0.733659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G425R|902|LOC_Os12g23800|protein_coding|CODING|LOC_Os12g23800.1|4|1) FN4141-S.SNP.12:13531309 chr12:013531309 0 W/13531309-13531309 FN4141-S SNP A -> G AC=1;AN=170;BQB=0.943092;DP=2782;DP4=1243,1436,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.59425e-07;MQSB=0.3638;RPB=0.923012;SGB=43.4296;VDB=0.594614;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cCa|L423P|902|LOC_Os12g23800|protein_coding|CODING|LOC_Os12g23800.1|4|1) FN501-S.SNP.12:13536949 chr12:013536949 0 W/13536949-13536949 FN501-S Single Base Substitution G-C INTERGENIC HET SNo: 499, Mutant_ID: FN501-S, Generation: M2, Mutations: 69, Genes: 23, Seed availability: Yes. FN3312-S.SNP.12:13537426 chr12:013537426 0 W/13537426-13537426 FN3312-S SNP C -> T AC=2;AN=182;BQB=0.970965;DP=1767;DP4=1206,471,18,6;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0.00113186;MQB=4.55881e-13;MQSB=0.0242584;RPB=0.989176;SGB=103.004;VDB=0.234509;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-XA21.SNP.12:13542204 chr12:013542204 0 W/13542204-13542204 FN1156-XA21 Single Base Substitution G-C INTERGENIC HET SNo: 1368, Mutant_ID: FN1156-XA21, Generation: M2, Mutations: 97, Genes: 15, Seed availability: Yes. FN569-S.SNP.12:13547890 chr12:013547890 0 W/13547890-13547890 FN569-S Single Base Substitution C-G INTERGENIC HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN2421.SNP.12:13549602 chr12:013549602 0 W/13549602-13549602 FN2421 SNP G -> A AC=1;AN=200;BQB=0.277607;DP=4766;DP4=2266,2085,14,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.24112e-12;MQSB=0.0497119;RPB=0.727286;SGB=86.5007;VDB=0.537801;EFF=INTRON(MODIFIER||||714|LOC_Os12g23830|protein_coding|CODING|LOC_Os12g23830.1|1|1) FN2203-S.SNP.12:13554421 chr12:013554421 0 W/13554421-13554421 FN2203-S SNP G -> A AC=2;AN=190;BQB=0.672208;DP=1972;DP4=997,565,7,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0;MQB=0.000394195;MQSB=0.0131798;RPB=0.907136;SGB=53.6492;VDB=0.290318;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.12:13556044 chr12:013556044 0 W/13556044-13556044 FN4325-S SNP C -> A AC=1;AN=170;BQB=0.955537;DP=2885;DP4=1381,1451,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.150433;MQB=0.723739;MQSB=7.62513e-10;RPB=0.994301;SGB=12.556;VDB=0.102415;EFF=STOP_GAINED(HIGH|NONSENSE|taC/taA|Y176*|958|LOC_Os12g23840|protein_coding|CODING|LOC_Os12g23840.1|2|1);LOF=(LOC_Os12g23840|LOC_Os12g23840|1|1.00);NMD=(LOC_Os12g23840|LOC_Os12g23840|1|1.00) FN689-S.SNP.12:13556360 chr12:013556360 0 W/13556360-13556360 FN689-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g23840 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 620, Mutant_ID: FN689-S, Generation: M2, Mutations: 67, Genes: 97, Seed availability: Yes. FN998-S.SNP.12:13562956 chr12:013562956 0 W/13562956-13562956 FN998-S Single Base Substitution C-T INTERGENIC HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2381.SNP.12:13565527 chr12:013565527 0 W/13565527-13565527 FN2381 SNP C -> T AC=1;AN=192;BQB=0.977387;DP=4902;DP4=1972,2618,8,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.22368e-16;MQSB=0.902952;RPB=0.644761;SGB=19.8696;VDB=0.166251;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.12:13565528 chr12:013565528 0 W/13565528-13565528 FN2381 SNP A -> T AC=1;AN=192;BQB=0.96135;DP=4920;DP4=1946,2590,6,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.34298e-13;MQSB=0.999908;RPB=0.647491;SGB=61.1661;VDB=0.252269;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.12:13572535 chr12:013572535 0 W/13572535-13572535 FN4140-S SNP T -> C AC=2;AN=170;BQB=0.918427;DP=2428;DP4=1183,1156,16,10;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.9972e-15;MQSB=0.704305;RPB=0.96893;SGB=110.069;VDB=0.991725;EFF=INTERGENIC(MODIFIER||||||||||1) FN1379-S.SNP.12:13578179 chr12:013578179 0 W/13578179-13578179 FN1379-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g23880 transposon protein, putative, unclassified, expressed SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN-101.SNP.12:13580366 chr12:013580366 0 W/13580366-13580366 FN-101 Single Base Substitution T-C INTERGENIC HOMO SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN2124-S.SNP.12:13580922 chr12:013580922 0 W/13580922-13580922 FN2124-S SNP A -> G AC=1;AN=168;BQB=0.100115;DP=3579;DP4=1670,1875,13,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.50538e-08;MQSB=0.810301;RPB=0.821717;SGB=41.6313;VDB=0.46276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3302-S.SNP.12:13581409 chr12:013581409 0 W/13581409-13581409 FN3302-S SNP G -> A AC=1;AN=182;BQB=0.998943;DP=3286;DP4=1604,1575,11,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000304321;MQB=9.54141e-11;MQSB=0.992895;RPB=0.430485;SGB=49.835;VDB=0.480398;EFF=INTERGENIC(MODIFIER||||||||||1) FN3339-S.SNP.12:13584175 chr12:013584175 0 W/13584175-13584175 FN3339-S SNP T -> C AC=1;AN=182;BQB=0.184213;DP=3133;DP4=1532,1515,5,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=0.000148629;MQSB=0.946163;RPB=0.249311;SGB=-3.85014;VDB=0.0978464;EFF=INTERGENIC(MODIFIER||||||||||1) FN3477-S.SNP.12:13586215 chr12:013586215 0 W/13586215-13586215 FN3477-S SNP C -> G AC=1;AN=184;BQB=0.999172;DP=3163;DP4=1815,1230,9,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.19139e-08;MQSB=0.749025;RPB=0.392821;SGB=66.8296;VDB=0.0194315;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.12:13587308 chr12:013587308 0 W/13587308-13587308 FN1745-S SNP G -> T AC=1;AN=188;BQB=0.768632;DP=2524;DP4=882,1574,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.52044e-06;MQSB=0.898623;RPB=0.807684;SGB=3.99491;VDB=0.357394;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.12:13587309 chr12:013587309 0 W/13587309-13587309 FN1745-S SNP A -> T AC=1;AN=188;BQB=0.853787;DP=2527;DP4=866,1591,6,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.54898e-07;MQSB=0.878922;RPB=0.659393;SGB=35.9843;VDB=0.548574;EFF=INTERGENIC(MODIFIER||||||||||1) FN3391-S.SNP.12:13588653 chr12:013588653 0 W/13588653-13588653 FN3391-S SNP C -> A AC=1;AN=184;BQB=0.795189;DP=3232;DP4=1663,1487,10,11;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.351795;MQB=0.194079;MQSB=0;RPB=0.347842;SGB=38.4058;VDB=0.579512;EFF=INTERGENIC(MODIFIER||||||||||1) FN-379.SNP.12:13611880 chr12:013611880 0 W/13611880-13611880 FN-379 Single Base Substitution C-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN2677-S.SNP.12:13612412 chr12:013612412 0 W/13612412-13612412 FN2677-S SNP C -> T AC=2;AN=200;BQB=0.0954664;DP=3674;DP4=1985,1403,17,14;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000272183;MQB=5.16647e-13;MQSB=1.40303e-09;RPB=0.788219;SGB=101.557;VDB=0.946133;EFF=INTERGENIC(MODIFIER||||||||||1) FN3670-S.SNP.12:13615860 chr12:013615860 0 W/13615860-13615860 FN3670-S SNP G -> T AC=1;AN=190;BQB=0.627912;DP=2745;DP4=1499,1134,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.25598e-05;MQSB=0.880954;RPB=0.283584;SGB=21.8853;VDB=0.583058;EFF=INTRON(MODIFIER||||80|LOC_Os12g23960|protein_coding|CODING|LOC_Os12g23960.1|1|1) FN3286-S.SNP.12:13616221 chr12:013616221 0 W/13616221-13616221 FN3286-S SNP C -> G AC=1;AN=182;BQB=0.940942;DP=3122;DP4=1290,1709,7,3;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000640615;MQB=2.21111e-06;MQSB=0.0929269;RPB=0.447629;SGB=39.699;VDB=0.112814;EFF=INTERGENIC(MODIFIER||||||||||1) FN367-S.SNP.12:13620711 chr12:013620711 0 W/13620711-13620711 FN367-S Single Base Substitution A-G INTERGENIC HOMO SNo: 356, Mutant_ID: FN367-S, Generation: M2, Mutations: 50, Genes: 106, Seed availability: Yes. FN3524-S.SNP.12:13624840 chr12:013624840 0 W/13624840-13624840 FN3524-S SNP A -> G AC=1;AN=188;BQB=0.975464;DP=2578;DP4=1258,1224,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.18125e-10;MQSB=0.942239;RPB=0.51046;SGB=26.0762;VDB=0.966718;EFF=INTERGENIC(MODIFIER||||||||||1) FN4147-S.SNP.12:13631919 chr12:013631919 0 W/13631919-13631919 FN4147-S SNP C -> A AC=2;AN=170;BQB=0.925386;DP=2432;DP4=921,1434,10,15;HOB=0.0232526;ICB=0.494188;MQ=42;MQ0F=0.0172697;MQB=1.04568e-06;MQSB=0.00104249;RPB=0.22465;SGB=105.627;VDB=0.961554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P62H|1873|LOC_Os12g23990|protein_coding|CODING|LOC_Os12g23990.1|1|1) FN3709-S.SNP.12:13633439 chr12:013633439 0 W/13633439-13633439 FN3709-S SNP G -> T AC=2;AN=190;BQB=0.794132;DP=2759;DP4=1331,1332,13,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00036245;MQB=8.48973e-11;MQSB=0.974669;RPB=0.877452;SGB=49.1985;VDB=0.459233;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D569Y|1873|LOC_Os12g23990|protein_coding|CODING|LOC_Os12g23990.1|1|1) FN3799-S.SNP.12:13633965 chr12:013633965 0 W/13633965-13633965 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.875159;DP=2425;DP4=1135,1164,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00494845;MQB=3.85604e-09;MQSB=0.505117;RPB=0.917312;SGB=67.3108;VDB=0.242712;EFF=INTRON(MODIFIER||||1873|LOC_Os12g23990|protein_coding|CODING|LOC_Os12g23990.1|1|1) FN824-S.SNP.12:13637376 chr12:013637376 0 W/13637376-13637376 FN824-S Single Base Substitution T-C INTRON HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN-210.SNP.12:13639119 chr12:013639119 0 W/13639119-13639119 FN-210 Single Base Substitution G-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN1243-S.SNP.12:13639739 chr12:013639739 0 W/13639739-13639739 FN1243-S Single Base Substitution G-A INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN1366-S.SNP.12:13639822 chr12:013639822 0 W/13639822-13639822 FN1366-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1155, Mutant_ID: FN1366-S, Generation: M2, Mutations: 82, Genes: 16, Seed availability: Yes. FN415-S.SNP.12:13640562 chr12:013640562 0 W/13640562-13640562 FN415-S Single Base Substitution T-G INTERGENIC HOMO SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. W598-2-1.SNP.12:13641145 chr12:013641145 0 W/13641145-13641145 W598-2-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1432, Mutant_ID: W598-2-1, Generation: M2, Mutations: 58, Genes: 16, Seed availability: Yes. FN2676-S.SNP.12:13647865 chr12:013647865 0 W/13647865-13647865 FN2676-S SNP C -> T AC=1;AN=200;BQB=0.396922;DP=4762;DP4=2369,2122,9,3;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00272995;MQB=4.04779e-06;MQSB=0.984519;RPB=0.997844;SGB=49.6594;VDB=0.38654;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A45T|82|LOC_Os12g24010|protein_coding|CODING|LOC_Os12g24010.1|1|1) FN1641-S.SNP.12:13648089 chr12:013648089 0 W/13648089-13648089 FN1641-S Single Base Substitution T-G INTERGENIC HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN2621-S.SNP.12:13648284 chr12:013648284 0 W/13648284-13648284 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.975491;DP=4474;DP4=2134,2067,11,14;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00245865;MQB=1.064e-12;MQSB=0.00171528;RPB=0.993761;SGB=79.9264;VDB=0.814233;EFF=INTERGENIC(MODIFIER||||||||||1) FN3400-S.SNP.12:13662170 chr12:013662170 0 W/13662170-13662170 FN3400-S SNP C -> T AC=1;AN=184;BQB=0.992763;DP=3930;DP4=2188,1632,14,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97427e-10;MQSB=0.999923;RPB=0.446019;SGB=84.9167;VDB=0.724868;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gTc|A155V|721|LOC_Os12g24040|protein_coding|CODING|LOC_Os12g24040.1|2|1) FN2112-S.SNP.12:13675412 chr12:013675412 0 W/13675412-13675412 FN2112-S SNP A -> T AC=1;AN=168;BQB=0.00571915;DP=4013;DP4=2038,1932,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000236121;MQSB=0.974752;RPB=0.717771;SGB=-68.0681;VDB=0.403266;EFF=INTERGENIC(MODIFIER||||||||||1) FN3533-S.SNP.12:13676056 chr12:013676056 0 W/13676056-13676056 FN3533-S SNP T -> A AC=2;AN=188;BQB=0.293162;DP=2599;DP4=1292,1247,11,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=7.22433e-09;MQSB=0.990466;RPB=0.982533;SGB=16.3413;VDB=0.653261;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.12:13679269 chr12:013679269 0 W/13679269-13679269 FN1550-S Single Base Substitution C-A INTERGENIC HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN427-S.SNP.12:13679842 chr12:013679842 0 W/13679842-13679842 FN427-S Single Base Substitution G-C INTERGENIC HOMO SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN3712-S.SNP.12:13681247 chr12:013681247 0 W/13681247-13681247 FN3712-S SNP T -> A AC=2;AN=190;BQB=0.999602;DP=2989;DP4=1414,1463,16,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.59724e-22;MQSB=0.947311;RPB=0.912239;SGB=158.388;VDB=0.39272;EFF=INTERGENIC(MODIFIER||||||||||1) FN1175-S.SNP.12:13682840 chr12:013682840 0 W/13682840-13682840 FN1175-S Single Base Substitution C-T INTERGENIC HET SNo: 1017, Mutant_ID: FN1175-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN4178-S.SNP.12:13685176 chr12:013685176 0 W/13685176-13685176 FN4178-S SNP G -> A AC=2;AN=170;BQB=0.998049;DP=2609;DP4=1225,1288,19,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.2692e-18;MQSB=0.838058;RPB=0.7774;SGB=154.496;VDB=0.110683;EFF=INTERGENIC(MODIFIER||||||||||1) FN360-S.SNP.12:13692407 chr12:013692407 0 W/13692407-13692407 FN360-S Single Base Substitution G-T INTERGENIC HET SNo: 349, Mutant_ID: FN360-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN-147.SNP.12:13693751 chr12:013693751 0 W/13693751-13693751 FN-147 Single Base Substitution G-T INTERGENIC HET SNo: 147, Mutant_ID: FN-147, Generation: M2, Mutations: 36, Genes: 7, Seed availability: Yes. FN2470.SNP.12:13704296 chr12:013704296 0 W/13704296-13704296 FN2470 SNP C -> A AC=2;AN=200;BQB=0.999999;DP=4917;DP4=2480,2045,30,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.31026e-24;MQSB=0.916194;RPB=0.412955;SGB=-48.3449;VDB=0.470407;EFF=INTERGENIC(MODIFIER||||||||||1) FN1058-S.SNP.12:13705825 chr12:013705825 0 W/13705825-13705825 FN1058-S Single Base Substitution C-T INTRON HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN-219.SNP.12:13709052 chr12:013709052 0 W/13709052-13709052 FN-219 Single Base Substitution C-T INTRON HET SNo: 218, Mutant_ID: FN-219, Generation: M2, Mutations: 39, Genes: 11, Seed availability: Yes. FN1415-S.SNP.12:13712338 chr12:013712338 0 W/13712338-13712338 FN1415-S Single Base Substitution G-A INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN3517-S.SNP.12:13714980 chr12:013714980 0 W/13714980-13714980 FN3517-S SNP A -> T AC=1;AN=188;BQB=0.911022;DP=3296;DP4=1397,1808,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000606796;MQB=3.3458e-07;MQSB=0.00328274;RPB=0.291805;SGB=58.0655;VDB=0.328077;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E274V|1656|LOC_Os12g24110|protein_coding|CODING|LOC_Os12g24110.1|3|1) FN785-S.SNP.12:13718516 chr12:013718516 0 W/13718516-13718516 FN785-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g24110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN2753-S.SNP.12:13719698 chr12:013719698 0 W/13719698-13719698 FN2753-S SNP G -> A AC=1;AN=200;BQB=0.958525;DP=4361;DP4=2217,1958,8,9;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00045861;MQB=2.22995e-08;MQSB=0.856849;RPB=0.0668252;SGB=72.6852;VDB=0.319722;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R1611Q|1656|LOC_Os12g24110|protein_coding|CODING|LOC_Os12g24110.1|7|1) FN3851-S.SNP.12:13730765 chr12:013730765 0 W/13730765-13730765 FN3851-S SNP A -> T AC=1;AN=158;BQB=0.963845;DP=2375;DP4=1296,998,13,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.65279e-11;MQSB=0.967673;RPB=0.765895;SGB=35.6659;VDB=0.864243;EFF=INTERGENIC(MODIFIER||||||||||1) FN-332.SNP.12:13732556 chr12:013732556 0 W/13732556-13732556 FN-332 Single Base Substitution G-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN929-S.SNP.12:13732618 chr12:013732618 0 W/13732618-13732618 FN929-S Single Base Substitution C-G INTERGENIC HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN-284.SNP.12:13734501 chr12:013734501 0 W/13734501-13734501 FN-284 Single Base Substitution G-T INTERGENIC HET SNo: 280, Mutant_ID: FN-284, Generation: M2, Mutations: 50, Genes: 136, Seed availability: Yes. FN3826-S.SNP.12:13755519 chr12:013755519 0 W/13755519-13755519 FN3826-S SNP T -> A AC=1;AN=190;BQB=0.744534;DP=3311;DP4=1818,1394,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.4819e-09;MQSB=0.85724;RPB=0.794835;SGB=1.00337;VDB=0.924181;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.12:13757586 chr12:013757586 0 W/13757586-13757586 FN2109-S SNP G -> C AC=1;AN=168;BQB=0.881943;DP=4084;DP4=2096,1942,14,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.21213e-13;MQSB=0.971863;RPB=0.49002;SGB=69.0561;VDB=0.30215;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.12:13763873 chr12:013763873 0 W/13763873-13763873 FN2201-S SNP T -> C AC=1;AN=190;BQB=0.0556191;DP=4673;DP4=2055,2102,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.00136957;MQSB=0.219286;RPB=0.945439;SGB=-100.524;VDB=0.99186;EFF=INTRON(MODIFIER||||927|LOC_Os12g24170|protein_coding|CODING|LOC_Os12g24170.1|16|1) FN-305.SNP.12:13764145 chr12:013764145 0 W/13764145-13764145 FN-305 Single Base Substitution T-A INTRON HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN3578-S.SNP.12:13765149 chr12:013765149 0 W/13765149-13765149 FN3578-S SNP C -> T AC=1;AN=188;BQB=0.734248;DP=2840;DP4=1675,1052,14,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.01568e-08;MQSB=0.924966;RPB=0.0366689;SGB=57.244;VDB=0.191782;EFF=INTRON(MODIFIER||||927|LOC_Os12g24170|protein_coding|CODING|LOC_Os12g24170.1|16|1) FN493-S.SNP.12:13766744 chr12:013766744 0 W/13766744-13766744 FN493-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g24170 beta-galactosidase precursor, putative, expressed SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN493-S.SNP.12:13766745 chr12:013766745 0 W/13766745-13766745 FN493-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g24170 beta-galactosidase precursor, putative, expressed SNo: 491, Mutant_ID: FN493-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1450-S.SNP.12:13767444 chr12:013767444 0 W/13767444-13767444 FN1450-S Single Base Substitution A-T INTRON HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3548-S.SNP.12:13770102 chr12:013770102 0 W/13770102-13770102 FN3548-S SNP G -> A AC=2;AN=188;BQB=0.487524;DP=2582;DP4=1158,1344,11,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=8.37945e-12;MQSB=0.790844;RPB=0.999247;SGB=17.8846;VDB=0.0887187;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S480L|927|LOC_Os12g24170|protein_coding|CODING|LOC_Os12g24170.1|12|1) W416-6-1.SNP.12:13770769 chr12:013770769 0 W/13770769-13770769 W416-6-1 Single Base Substitution G-C INTRON HET SNo: 1408, Mutant_ID: W416-6-1, Generation: M2, Mutations: 54, Genes: 48, Seed availability: Yes. FN1647-S.SNP.12:13771822 chr12:013771822 0 W/13771822-13771822 FN1647-S Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os12g24170 beta-galactosidase precursor, putative, expressed SNo: 1352, Mutant_ID: FN1647-S, Generation: M2, Mutations: 88, Genes: 21, Seed availability: Yes. FN-9.SNP.12:13782817 chr12:013782817 0 W/13782817-13782817 FN-9 Single Base Substitution A-G INTERGENIC Homo SNo: 9, Mutant_ID: FN-9, Generation: M2, Mutations: 59, Genes: 71, Seed availability: Yes. FN2684-S.SNP.12:13784342 chr12:013784342 0 W/13784342-13784342 FN2684-S SNP C -> T AC=1;AN=200;BQB=0.950241;DP=4707;DP4=2293,2144,9,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.31294e-15;MQSB=0.980748;RPB=0.98879;SGB=58.1418;VDB=0.425957;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.12:13791989 chr12:013791989 0 W/13791989-13791989 FN2353 SNP C -> T AC=1;AN=192;BQB=0.971285;DP=4712;DP4=2153,2139,5,10;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00339559;MQB=8.59749e-06;MQSB=0.00869067;RPB=0.590643;SGB=23.7852;VDB=0.850592;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cTa|P223L|874|LOC_Os12g24200|protein_coding|CODING|LOC_Os12g24200.1|1|1) FN1624-S.SNP.12:13792524 chr12:013792524 0 W/13792524-13792524 FN1624-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN4128-S.SNP.12:13795131 chr12:013795131 0 W/13795131-13795131 FN4128-S SNP A -> G AC=1;AN=182;BQB=0.933647;DP=3095;DP4=1557,1479,6,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.1848e-10;MQSB=0.806961;RPB=0.803188;SGB=49.6712;VDB=0.590846;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcT/tcC|S678|702|LOC_Os12g24210|protein_coding|CODING|LOC_Os12g24210.1|8|1) FN4184-S.SNP.12:13800085 chr12:013800085 0 W/13800085-13800085 FN4184-S SNP T -> C AC=2;AN=170;BQB=0.99341;DP=3006;DP4=1303,1597,9,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.66678e-13;MQSB=0.983355;RPB=0.933936;SGB=105.627;VDB=0.473912;EFF=INTERGENIC(MODIFIER||||||||||1) FN1451-S.SNP.12:13802345 chr12:013802345 0 W/13802345-13802345 FN1451-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g24220 retrotransposon protein, putative, unclassified, expressed SNo: 1221, Mutant_ID: FN1451-S, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN993-S.SNP.12:13810825 chr12:013810825 0 W/13810825-13810825 FN993-S Single Base Substitution G-A INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. W706-3-1.SNP.12:13811093 chr12:013811093 0 W/13811093-13811093 W706-3-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN4039-S.SNP.12:13811237 chr12:013811237 0 W/13811237-13811237 FN4039-S SNP G -> T AC=2;AN=168;BQB=0.489883;DP=2393;DP4=789,1481,9,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.14398e-13;MQSB=0.577604;RPB=0.0774026;SGB=123.066;VDB=0.38734;EFF=INTERGENIC(MODIFIER||||||||||1) FN4068-S.SNP.12:13812366 chr12:013812366 0 W/13812366-13812366 FN4068-S SNP G -> A AC=1;AN=182;BQB=0.925181;DP=3073;DP4=1535,1483,4,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=8.73769e-07;MQSB=0.956172;RPB=0.579532;SGB=39.6007;VDB=0.364597;EFF=INTRON(MODIFIER||||130|LOC_Os12g24240|protein_coding|CODING|LOC_Os12g24240.1|1|1) FN796-S.SNP.12:13813340 chr12:013813340 0 W/13813340-13813340 FN796-S Single Base Substitution C-T INTRON HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN1719-S.SNP.12:13818680 chr12:013818680 0 W/13818680-13818680 FN1719-S SNP G -> C AC=2;AN=188;BQB=0.0160388;DP=4103;DP4=2063,1958,35,30;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.53587e-22;MQSB=0.994317;RPB=0.0860095;SGB=-195.458;VDB=0.509712;EFF=INTRON(MODIFIER||||1083|LOC_Os12g24250|protein_coding|CODING|LOC_Os12g24250.1|19|1) FN892-S.SNP.12:13830712 chr12:013830712 0 W/13830712-13830712 FN892-S Single Base Substitution T-C INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3799-S.SNP.12:13832562 chr12:013832562 0 W/13832562-13832562 FN3799-S SNP T -> C AC=1;AN=190;BQB=0.916552;DP=2859;DP4=1526,1257,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.00944386;MQB=0.11765;MQSB=0.0198811;RPB=0.371514;SGB=49.0954;VDB=0.296582;EFF=INTERGENIC(MODIFIER||||||||||1) FN3861-S.SNP.12:13832562 chr12:013832562 0 W/13832562-13832562 FN3861-S SNP T -> C AC=1;AN=158;BQB=0.923674;DP=2642;DP4=1381,1190,12,3;HOB=8.01154e-05;ICB=0.000161245;MQ=43;MQ0F=0.00984103;MQB=0.666156;MQSB=0.308906;RPB=0.167854;SGB=40.8124;VDB=0.25488;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.12:13836027 chr12:013836027 0 W/13836027-13836027 FN2435 SNP A -> C AC=1;AN=200;BQB=0.995525;DP=4904;DP4=2428,2138,9,13;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0224307;MQB=0.000376333;MQSB=0.666423;RPB=0.636495;SGB=42.5108;VDB=0.77701;EFF=INTRON(MODIFIER||||990|LOC_Os12g24260|protein_coding|CODING|LOC_Os12g24260.1|3|1) FN2435.SNP.12:13836032 chr12:013836032 0 W/13836032-13836032 FN2435 SNP G -> A AC=1;AN=200;BQB=0.257904;DP=4954;DP4=2501,2227,11,25;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0260396;MQB=1.163e-11;MQSB=0.130177;RPB=0.535952;SGB=-327.018;VDB=0.910528;EFF=INTRON(MODIFIER||||990|LOC_Os12g24260|protein_coding|CODING|LOC_Os12g24260.1|3|1) FN2638-S.SNP.12:13843047 chr12:013843047 0 W/13843047-13843047 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.999544;DP=4133;DP4=1999,1847,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.46404e-18;MQSB=0.999263;RPB=0.940152;SGB=63.3521;VDB=0.925949;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.12:13848779 chr12:013848779 0 W/13848779-13848779 FN2137-S SNP C -> A AC=1;AN=168;BQB=0.522762;DP=3703;DP4=1830,1826,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.79686e-11;MQSB=0.969418;RPB=0.999787;SGB=-41.2125;VDB=0.812764;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.12:13851771 chr12:013851771 0 W/13851771-13851771 FN3501-S SNP G -> A AC=1;AN=188;BQB=0.969005;DP=2861;DP4=1349,1442,8,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.49445e-06;MQSB=0.930115;RPB=0.0997374;SGB=28.8977;VDB=0.014119;EFF=INTERGENIC(MODIFIER||||||||||1) FN1040-S.SNP.12:13857693 chr12:013857693 0 W/13857693-13857693 FN1040-S Single Base Substitution C-T INTERGENIC HET SNo: 936, Mutant_ID: FN1040-S, Generation: M2, Mutations: 54, Genes: 8, Seed availability: Yes. FN2216-S.SNP.12:13860541 chr12:013860541 0 W/13860541-13860541 FN2216-S SNP G -> A AC=1;AN=190;BQB=0.996564;DP=5030;DP4=2724,1852,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.89412e-06;MQSB=0.157542;RPB=0.995054;SGB=39.9877;VDB=0.491369;EFF=INTERGENIC(MODIFIER||||||||||1) FN2329.SNP.12:13864111 chr12:013864111 0 W/13864111-13864111 FN2329 SNP G -> C AC=1;AN=192;BQB=0.841234;DP=4901;DP4=2372,2279,10,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.21216e-13;MQSB=0.728332;RPB=0.371351;SGB=49.4287;VDB=0.0932529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1750-S.SNP.12:13865288 chr12:013865288 0 W/13865288-13865288 FN1750-S SNP A -> G AC=2;AN=188;BQB=0.0869515;DP=2858;DP4=1820,973,22,14;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=2.2604e-10;MQSB=0.812656;RPB=0.92112;SGB=36.4041;VDB=0.869314;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.12:13876948 chr12:013876948 0 W/13876948-13876948 FN3434-S SNP G -> C AC=1;AN=184;BQB=0.99999;DP=2925;DP4=1077,1699,12,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.99403e-12;MQSB=0.403309;RPB=0.800196;SGB=93.9603;VDB=0.970511;EFF=INTERGENIC(MODIFIER||||||||||1) FN3598-S.SNP.12:13877547 chr12:013877547 0 W/13877547-13877547 FN3598-S SNP C -> T AC=1;AN=188;BQB=0.488287;DP=3716;DP4=2112,1517,13,14;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0;MQB=3.82257e-12;MQSB=0.62241;RPB=0.266556;SGB=54.0524;VDB=0.203929;EFF=INTERGENIC(MODIFIER||||||||||1) FN1039-S.SNP.12:13889858 chr12:013889858 0 W/13889858-13889858 FN1039-S Single Base Substitution C-A INTERGENIC HOMO SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1097-S.SNP.12:13892528 chr12:013892528 0 W/13892528-13892528 FN1097-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g24350 retrotransposon, putative, centromere-specific SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1442-S.SNP.12:13894111 chr12:013894111 0 W/13894111-13894111 FN1442-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN2533-S.SNP.12:13894541 chr12:013894541 0 W/13894541-13894541 FN2533-S SNP T -> C AC=2;AN=198;BQB=0.521798;DP=4139;DP4=2247,1746,10,16;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0125634;MQB=0.814927;MQSB=0;RPB=0.825608;SGB=83.2905;VDB=0.393378;EFF=INTERGENIC(MODIFIER||||||||||1) FN-408.SNP.12:13896077 chr12:013896077 0 W/13896077-13896077 FN-408 Single Base Substitution T-C INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.12:13896077 chr12:013896077 0 W/13896077-13896077 FN408-S Single Base Substitution T-C INTRON HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN3668-S.SNP.12:13900024 chr12:013900024 0 W/13900024-13900024 FN3668-S SNP C -> T AC=1;AN=190;BQB=0.942212;DP=2932;DP4=1534,1294,5,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.00511596;MQB=0.0556744;MQSB=0.995226;RPB=0.767805;SGB=49.0954;VDB=0.908005;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P1099L|1751|LOC_Os12g24364|protein_coding|CODING|LOC_Os12g24364.1|4|1) FN1335-S.SNP.12:13910213 chr12:013910213 0 W/13910213-13910213 FN1335-S Single Base Substitution T-C INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN1556-S.SNP.12:13912591 chr12:013912591 0 W/13912591-13912591 FN1556-S Single Base Substitution C-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1556-S.SNP.12:13912592 chr12:013912592 0 W/13912592-13912592 FN1556-S Single Base Substitution T-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN2329.SNP.12:13917214 chr12:013917214 0 W/13917214-13917214 FN2329 SNP T -> G AC=1;AN=192;BQB=0.718241;DP=4708;DP4=2482,1977,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00361087;MQB=7.4457e-11;MQSB=0.0189628;RPB=0.954327;SGB=21.4339;VDB=0.398408;EFF=INTERGENIC(MODIFIER||||||||||1) FN587-S.SNP.12:13919855 chr12:013919855 0 W/13919855-13919855 FN587-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g24400 transposon protein, putative, unclassified, expressed SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3439-S.SNP.12:13920746 chr12:013920746 0 W/13920746-13920746 FN3439-S SNP C -> G AC=1;AN=184;BQB=0.992316;DP=3162;DP4=1925,1130,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000948767;MQB=0.000784825;MQSB=0.00113872;RPB=0.400341;SGB=28.7043;VDB=0.563265;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.12:13924539 chr12:013924539 0 W/13924539-13924539 FN2723-S SNP T -> C AC=1;AN=200;BQB=0.484653;DP=4563;DP4=2116,2294,5,12;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00591716;MQB=0.932988;MQSB=0.000542376;RPB=0.988485;SGB=29.4849;VDB=0.790324;EFF=INTERGENIC(MODIFIER||||||||||1) FN3653-S.SNP.12:13928203 chr12:013928203 0 W/13928203-13928203 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.679781;DP=2697;DP4=1138,1425,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.16051e-06;MQSB=0.642561;RPB=0.732054;SGB=35.4339;VDB=0.443438;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcC/tcT|S667|866|LOC_Os12g24410|protein_coding|CODING|LOC_Os12g24410.1|10|1) FN3653-S.SNP.12:13928204 chr12:013928204 0 W/13928204-13928204 FN3653-S SNP G -> A AC=1;AN=190;BQB=0.91569;DP=2689;DP4=1134,1464,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.20858e-05;MQSB=0.633749;RPB=0.932652;SGB=25.439;VDB=0.109534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tTc|S667F|866|LOC_Os12g24410|protein_coding|CODING|LOC_Os12g24410.1|10|1) FN1268-S.SNP.12:13936819 chr12:013936819 0 W/13936819-13936819 FN1268-S Single Base Substitution C-G INTRON HET SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN2365.SNP.12:13943012 chr12:013943012 0 W/13943012-13943012 FN2365 SNP A -> C AC=1;AN=192;BQB=0.523595;DP=5022;DP4=2170,2417,8,10;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.0091597;MQB=0.701176;MQSB=0.829385;RPB=0.209756;SGB=31.4783;VDB=0.196158;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.12:13943095 chr12:013943095 0 W/13943095-13943095 FN945-S Single Base Substitution T-A INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN945-S.SNP.12:13943104 chr12:013943104 0 W/13943104-13943104 FN945-S Single Base Substitution T-G INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN2378.SNP.12:13946969 chr12:013946969 0 W/13946969-13946969 FN2378 SNP C -> T AC=1;AN=192;BQB=0.825773;DP=4712;DP4=2373,1930,14,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.24323e-13;MQSB=0.934133;RPB=0.274479;SGB=93.2452;VDB=0.636446;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.12:13949977 chr12:013949977 0 W/13949977-13949977 FN2326 SNP T -> A AC=1;AN=192;BQB=0.917883;DP=4426;DP4=2040,2003,12,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.46556e-13;MQSB=0.995327;RPB=0.592681;SGB=19.8696;VDB=0.72731;EFF=INTERGENIC(MODIFIER||||||||||1) FN2241-S.SNP.12:13950622 chr12:013950622 0 W/13950622-13950622 FN2241-S SNP C -> T AC=1;AN=190;BQB=0.0706329;DP=4038;DP4=1997,1613,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.62017e-06;MQSB=0.758977;RPB=0.985312;SGB=50.3161;VDB=0.882335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A143V|1047|LOC_Os12g24450|protein_coding|CODING|LOC_Os12g24450.1|2|1) FN4129-S.SNP.12:13953811 chr12:013953811 0 W/13953811-13953811 FN4129-S SNP T -> A AC=1;AN=182;BQB=0.17324;DP=2621;DP4=1252,1271,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=7.6428e-06;MQSB=0.981225;RPB=0.983544;SGB=49.6712;VDB=0.861798;EFF=SPLICE_SITE_REGION(LOW||||1047|LOC_Os12g24450|protein_coding|CODING|LOC_Os12g24450.1|9|1),INTRON(MODIFIER||||1047|LOC_Os12g24450|protein_coding|CODING|LOC_Os12g24450.1|9|1) FN2620-S.SNP.12:13954922 chr12:013954922 0 W/13954922-13954922 FN2620-S SNP A -> G AC=1;AN=198;BQB=0.539727;DP=3791;DP4=1795,1711,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000527565;MQB=2.32345e-11;MQSB=0.649589;RPB=0.82112;SGB=65.3149;VDB=0.95557;EFF=INTRON(MODIFIER||||1047|LOC_Os12g24450|protein_coding|CODING|LOC_Os12g24450.1|11|1) FN478-S.SNP.12:13956467 chr12:013956467 0 W/13956467-13956467 FN478-S Single Base Substitution T-G INTERGENIC HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN-66.SNP.12:13960431 chr12:013960431 0 W/13960431-13960431 FN-66 Single Base Substitution C-T INTERGENIC HET SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN898-S.SNP.12:13967426 chr12:013967426 0 W/13967426-13967426 FN898-S Single Base Substitution A-C INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN771-S.SNP.12:13970758 chr12:013970758 0 W/13970758-13970758 FN771-S Single Base Substitution A-G INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. W278-3-1.SNP.12:13972108 chr12:013972108 0 W/13972108-13972108 W278-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1403, Mutant_ID: W278-3-1, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN1012-S.SNP.12:13974325 chr12:013974325 0 W/13974325-13974325 FN1012-S Single Base Substitution A-G INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3401-S.SNP.12:13976891 chr12:013976891 0 W/13976891-13976891 FN3401-S SNP G -> A AC=1;AN=184;BQB=0.883303;DP=3025;DP4=1561,1342,17,15;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.25422e-17;MQSB=0.975786;RPB=0.556446;SGB=29.6292;VDB=0.239398;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.12:13977069 chr12:013977069 0 W/13977069-13977069 FN2630-S SNP G -> A AC=1;AN=200;BQB=0.187033;DP=4132;DP4=1701,2069,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.348e-10;MQSB=3.33797e-06;RPB=0.757101;SGB=72.7161;VDB=0.224938;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.12:13981833 chr12:013981833 0 W/13981833-13981833 FN498-S Single Base Substitution C-T INTERGENIC HOMO SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN1394-S.SNP.12:13982286 chr12:013982286 0 W/13982286-13982286 FN1394-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1175, Mutant_ID: FN1394-S, Generation: M2, Mutations: 73, Genes: 35, Seed availability: No. FN3595-S.SNP.12:13990426 chr12:013990426 0 W/13990426-13990426 FN3595-S SNP C -> A AC=1;AN=190;BQB=0.883279;DP=3072;DP4=1655,1295,8,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.13095e-06;MQSB=0.921319;RPB=0.0511385;SGB=15.9981;VDB=0.0361303;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G57V|263|LOC_Os12g24500|protein_coding|CODING|LOC_Os12g24500.1|1|1) FN-272.SNP.12:13992112 chr12:013992112 0 W/13992112-13992112 FN-272 Single Base Substitution A-T INTRON HET SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN2703-S.SNP.12:13997081 chr12:013997081 0 W/13997081-13997081 FN2703-S SNP G -> A AC=1;AN=200;BQB=0.669043;DP=4614;DP4=2351,2036,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.91116e-06;MQSB=0.958741;RPB=0.948687;SGB=11.2488;VDB=0.242987;EFF=INTERGENIC(MODIFIER||||||||||1) FN2338.SNP.12:14010044 chr12:014010044 0 W/14010044-14010044 FN2338 SNP G -> C AC=1;AN=192;BQB=0.722032;DP=4247;DP4=2220,1648,8,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.14191e-07;MQSB=0.616547;RPB=0.8732;SGB=29.087;VDB=0.0901112;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A204G|212|LOC_Os12g24530|protein_coding|CODING|LOC_Os12g24530.1|1|1) FN791-S.SNP.12:14011849 chr12:014011849 0 W/14011849-14011849 FN791-S Single Base Substitution T-A INTERGENIC HET SNo: 711, Mutant_ID: FN791-S, Generation: M2, Mutations: 58, Genes: 17, Seed availability: Yes. FN2455.SNP.12:14025658 chr12:014025658 0 W/14025658-14025658 FN2455 SNP A -> T AC=1;AN=200;BQB=0.729142;DP=4906;DP4=2750,1946,9,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.06086e-11;MQSB=0.99974;RPB=0.0285254;SGB=61.9006;VDB=0.257764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.12:14027300 chr12:014027300 0 W/14027300-14027300 FN1556-S Single Base Substitution T-A INTRON HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN1572-S.SNP.12:14030721 chr12:014030721 0 W/14030721-14030721 FN1572-S Single Base Substitution G-C NON_SYNONYMOUS_CODING Homo LOC_Os12g24550 expressed protein SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3834-S.SNP.12:14040481 chr12:014040481 0 W/14040481-14040481 FN3834-S SNP A -> G AC=2;AN=190;BQB=0.727933;DP=3076;DP4=1673,1259,18,7;HOB=0.020831;ICB=0.494793;MQ=29;MQ0F=0.11541;MQB=0.880189;MQSB=0.0104362;RPB=0.997395;SGB=78.7471;VDB=0.947756;EFF=INTRON(MODIFIER||||1619|LOC_Os12g24555|protein_coding|CODING|LOC_Os12g24555.1|4|1) FN2657-S.SNP.12:14045077 chr12:014045077 0 W/14045077-14045077 FN2657-S SNP C -> T AC=1;AN=200;BQB=0.867453;DP=6149;DP4=2754,2910,25,13;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.300374;MQB=0.00729067;MQSB=0;RPB=6.48106e-05;SGB=-1.00683;VDB=0.0534656;EFF=INTERGENIC(MODIFIER||||||||||1) FN3354-S.SNP.12:14047474 chr12:014047474 0 W/14047474-14047474 FN3354-S SNP C -> A AC=1;AN=184;BQB=0.06274;DP=2746;DP4=1082,1491,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.54441e-08;MQSB=0.810931;RPB=0.21994;SGB=-13.1487;VDB=0.840279;EFF=INTERGENIC(MODIFIER||||||||||1) FN453-S.SNP.12:14050161 chr12:014050161 0 W/14050161-14050161 FN453-S Single Base Substitution A-G INTERGENIC HOMO SNo: 452, Mutant_ID: FN453-S, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN963-S.SNP.12:14051562 chr12:014051562 0 W/14051562-14051562 FN963-S Single Base Substitution A-T INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3424-S.SNP.12:14057874 chr12:014057874 0 W/14057874-14057874 FN3424-S SNP G -> A AC=1;AN=184;BQB=0.963744;DP=3231;DP4=1483,1647,15,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.84541e-12;MQSB=0.143844;RPB=0.177604;SGB=93.9603;VDB=0.00227877;EFF=INTERGENIC(MODIFIER||||||||||1) FN477-S.SNP.12:14061137 chr12:014061137 0 W/14061137-14061137 FN477-S Single Base Substitution G-C INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3505-S.SNP.12:14066262 chr12:014066262 0 W/14066262-14066262 FN3505-S SNP T -> G AC=2;AN=188;BQB=0.693126;DP=2537;DP4=1354,1105,12,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.18436e-09;MQSB=0.88921;RPB=0.94788;SGB=57.244;VDB=0.412606;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.12:14069421 chr12:014069421 0 W/14069421-14069421 FN2795-S SNP G -> A AC=1;AN=198;BQB=0.825883;DP=4065;DP4=1809,2070,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.90021e-11;MQSB=0.338299;RPB=0.999191;SGB=55.2955;VDB=0.695448;EFF=INTERGENIC(MODIFIER||||||||||1) FN-125.SNP.12:14072525 chr12:014072525 0 W/14072525-14072525 FN-125 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g24600 retrotransposon protein, putative, unclassified, expressed SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2358.SNP.12:14076460 chr12:014076460 0 W/14076460-14076460 FN2358 SNP C -> G AC=2;AN=192;BQB=0.114281;DP=4998;DP4=2363,2290,19,22;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00080032;MQB=2.76398e-22;MQSB=0.732358;RPB=0.0173581;SGB=-319.574;VDB=0.535442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atC/atG|I1197M|1514|LOC_Os12g24600|protein_coding|CODING|LOC_Os12g24600.1|6|1) FN2309.SNP.12:14077593 chr12:014077593 0 W/14077593-14077593 FN2309 SNP G -> A AC=1;AN=192;BQB=0.420527;DP=5017;DP4=2431,2303,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.89612e-09;MQSB=0.995681;RPB=0.891378;SGB=-15.8974;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.12:14078328 chr12:014078328 0 W/14078328-14078328 FN2268-S SNP A -> G AC=1;AN=190;BQB=0.83013;DP=4765;DP4=2273,2126,21,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000209864;MQB=9.92913e-21;MQSB=0.397426;RPB=0.991278;SGB=114.286;VDB=0.630774;EFF=INTERGENIC(MODIFIER||||||||||1) FN4271-S.SNP.12:14082897 chr12:014082897 0 W/14082897-14082897 FN4271-S SNP A -> G AC=1;AN=170;BQB=0.137152;DP=2495;DP4=1232,1080,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000400802;MQB=0.00449638;MQSB=0.999941;RPB=0.77795;SGB=-1.43813;VDB=0.587183;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N1125S|1639|LOC_Os12g24610|protein_coding|CODING|LOC_Os12g24610.1|4|1) FN3598-S.SNP.12:14097439 chr12:014097439 0 W/14097439-14097439 FN3598-S SNP A -> G AC=1;AN=188;BQB=0.896987;DP=2175;DP4=916,1174,3,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.81589e-06;MQSB=0.913751;RPB=0.998916;SGB=35.3493;VDB=0.149896;EFF=INTRON(MODIFIER||||158|LOC_Os12g24630|protein_coding|CODING|LOC_Os12g24630.1|2|1) FN1012-S.SNP.12:14099264 chr12:014099264 0 W/14099264-14099264 FN1012-S Single Base Substitution C-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN3815-S.SNP.12:14100564 chr12:014100564 0 W/14100564-14100564 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.944529;DP=2694;DP4=1488,1108,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.02358e-05;MQSB=0.928169;RPB=0.994222;SGB=35.4339;VDB=0.476415;EFF=INTERGENIC(MODIFIER||||||||||1) FN2478.SNP.12:14101034 chr12:014101034 0 W/14101034-14101034 FN2478 SNP G -> A AC=1;AN=200;BQB=0.344031;DP=4648;DP4=2123,2165,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.12517e-10;MQSB=0.999543;RPB=0.642108;SGB=-14.9257;VDB=0.903899;EFF=INTERGENIC(MODIFIER||||||||||1) FN3509-S.SNP.12:14102647 chr12:014102647 0 W/14102647-14102647 FN3509-S SNP A -> T AC=1;AN=188;BQB=0.983273;DP=2770;DP4=1306,1410,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.3272e-05;MQSB=0.94577;RPB=0.632666;SGB=30.8063;VDB=0.07273;EFF=INTERGENIC(MODIFIER||||||||||1) FN836-S.SNP.12:14102713 chr12:014102713 0 W/14102713-14102713 FN836-S Single Base Substitution G-T INTERGENIC HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN482-S.SNP.12:14103085 chr12:014103085 0 W/14103085-14103085 FN482-S Single Base Substitution G-A INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN756-S.SNP.12:14104170 chr12:014104170 0 W/14104170-14104170 FN756-S Single Base Substitution A-T INTERGENIC HET SNo: 678, Mutant_ID: FN756-S, Generation: M2, Mutations: 62, Genes: 7, Seed availability: Yes. FN2696-S.SNP.12:14104488 chr12:014104488 0 W/14104488-14104488 FN2696-S SNP G -> A AC=1;AN=200;BQB=0.978265;DP=4933;DP4=2336,2312,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.67193e-16;MQSB=0.963885;RPB=0.141173;SGB=87.1368;VDB=0.0333766;EFF=INTERGENIC(MODIFIER||||||||||1) FN1008-S.SNP.12:14104860 chr12:014104860 0 W/14104860-14104860 FN1008-S Single Base Substitution G-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN_N1-130-1.SNP.12:14105654 chr12:014105654 0 W/14105654-14105654 FN_N1-130-1 Single Base Substitution C-A HET SNo: 1376, Mutant_ID: FN_N1-130-1, Generation: M3, Mutations: 57, Genes: 11, Seed availability: Yes. FN1490-S.SNP.12:14114810 chr12:014114810 0 W/14114810-14114810 FN1490-S Single Base Substitution C-T INTERGENIC HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN2172-S.SNP.12:14132386 chr12:014132386 0 W/14132386-14132386 FN2172-S SNP A -> G AC=1;AN=168;BQB=0.0714776;DP=3171;DP4=1182,1961,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.133712;MQB=0.0278692;MQSB=0.999863;RPB=0.879444;SGB=-13.2184;VDB=0.0241522;EFF=INTRON(MODIFIER||||903|LOC_Os12g24680|protein_coding|CODING|LOC_Os12g24680.1|1|1) FN3825-S.SNP.12:14136493 chr12:014136493 0 W/14136493-14136493 FN3825-S SNP C -> T AC=1;AN=190;BQB=0.960578;DP=3085;DP4=1534,1407,10,13;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0272285;MQB=2.41564e-05;MQSB=0.00225115;RPB=0.999872;SGB=71.6393;VDB=0.971409;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P606S|903|LOC_Os12g24680|protein_coding|CODING|LOC_Os12g24680.1|6|1) FN3576-S.SNP.12:14137856 chr12:014137856 0 W/14137856-14137856 FN3576-S SNP A -> T AC=2;AN=188;BQB=0.824803;DP=2578;DP4=1139,1296,21,10;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.0391777;MQB=0.0813722;MQSB=0.000546657;RPB=0.448164;SGB=64.2256;VDB=0.0584927;EFF=INTRON(MODIFIER||||903|LOC_Os12g24680|protein_coding|CODING|LOC_Os12g24680.1|8|1) FN2492.SNP.12:14149002 chr12:014149002 0 W/14149002-14149002 FN2492 SNP T -> A AC=2;AN=200;BQB=0.54089;DP=4569;DP4=2226,1988,13,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.46556e-19;MQSB=0.872852;RPB=0.894538;SGB=71.1676;VDB=0.163287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2492.SNP.12:14149003 chr12:014149003 0 W/14149003-14149003 FN2492 SNP T -> A AC=2;AN=200;BQB=0.262427;DP=4570;DP4=2256,2061,14,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.61717e-19;MQSB=0.834714;RPB=0.930177;SGB=108.768;VDB=0.241189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3436-S.SNP.12:14149285 chr12:014149285 0 W/14149285-14149285 FN3436-S SNP G -> C AC=1;AN=184;BQB=0.974513;DP=2557;DP4=1162,1327,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000391083;MQB=3.19907e-12;MQSB=0.840312;RPB=0.490039;SGB=89.4385;VDB=0.747629;EFF=INTERGENIC(MODIFIER||||||||||1) FN1350-S.SNP.12:14151871 chr12:014151871 0 W/14151871-14151871 FN1350-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1147, Mutant_ID: FN1350-S, Generation: M2, Mutations: 38, Genes: 14, Seed availability: Yes. FN1696-S.SNP.12:14157867 chr12:014157867 0 W/14157867-14157867 FN1696-S SNP A -> G AC=2;AN=188;BQB=0.195865;DP=3549;DP4=2336,1157,32,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00028177;MQB=2.19755e-15;MQSB=0.977077;RPB=0.929588;SGB=-93.95;VDB=0.790024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1458-S.SNP.12:14158650 chr12:014158650 0 W/14158650-14158650 FN1458-S Single Base Substitution G-A INTERGENIC HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN-257.SNP.12:14163548 chr12:014163548 0 W/14163548-14163548 FN-257 Single Base Substitution A-G INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2685-S.SNP.12:14168660 chr12:014168660 0 W/14168660-14168660 FN2685-S SNP C -> T AC=1;AN=198;BQB=0.324921;DP=4714;DP4=2249,2101,8,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.20164e-11;MQSB=0.960647;RPB=0.98923;SGB=29.4849;VDB=0.294356;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Tac|H228Y|934|LOC_Os12g24710|protein_coding|CODING|LOC_Os12g24710.1|2|1) FN2430.SNP.12:14169196 chr12:014169196 0 W/14169196-14169196 FN2430 SNP A -> G AC=1;AN=200;BQB=0.997303;DP=4845;DP4=2101,2354,13,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00619195;MQB=2.47892e-06;MQSB=1.08543e-08;RPB=0.918165;SGB=-10.0844;VDB=0.143756;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Gct|T266A|934|LOC_Os12g24710|protein_coding|CODING|LOC_Os12g24710.1|3|1) FN_N1-116-1.SNP.12:14171782 chr12:014171782 0 W/14171782-14171782 FN_N1-116-1 Single Base Substitution T-C Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN2791-S.SNP.12:14175635 chr12:014175635 0 W/14175635-14175635 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.991158;DP=4372;DP4=1861,2286,12,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000228728;MQB=4.70514e-14;MQSB=0.929265;RPB=0.968886;SGB=18.9201;VDB=0.55558;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.12:14177672 chr12:014177672 0 W/14177672-14177672 FN1701-S SNP G -> A AC=1;AN=188;BQB=0.00273604;DP=3728;DP4=1628,2070,10,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00154942;MQSB=0.95932;RPB=0.339492;SGB=-100.608;VDB=0.771363;EFF=INTERGENIC(MODIFIER||||||||||1) FN3832-S.SNP.12:14178000 chr12:014178000 0 W/14178000-14178000 FN3832-S SNP A -> G AC=1;AN=190;BQB=0.90393;DP=3008;DP4=1581,1316,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.96232e-09;MQSB=0.958462;RPB=0.979182;SGB=53.6492;VDB=0.24143;EFF=INTERGENIC(MODIFIER||||||||||1) FN3843-S.SNP.12:14181309 chr12:014181309 0 W/14181309-14181309 FN3843-S SNP A -> G AC=1;AN=190;BQB=0.895064;DP=2237;DP4=1056,1108,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14576e-07;MQSB=0.993311;RPB=0.52465;SGB=36.1006;VDB=0.251385;EFF=INTERGENIC(MODIFIER||||||||||1) FN1717-S.SNP.12:14181931 chr12:014181931 0 W/14181931-14181931 FN1717-S SNP C -> T AC=2;AN=188;BQB=0.315742;DP=1410;DP4=823,517,11,6;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0;MQB=0.00385778;MQSB=1.4013e-45;RPB=0.854467;SGB=-79.0704;VDB=0.0185998;EFF=INTERGENIC(MODIFIER||||||||||1) FN598-S.SNP.12:14185483 chr12:014185483 0 W/14185483-14185483 FN598-S Single Base Substitution C-G INTERGENIC HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN2213-S.SNP.12:14186027 chr12:014186027 0 W/14186027-14186027 FN2213-S SNP C -> G AC=1;AN=190;BQB=0.109511;DP=4905;DP4=2177,2413,13,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.07738e-14;MQSB=0.875269;RPB=0.999966;SGB=30.527;VDB=0.30317;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.12:14186464 chr12:014186464 0 W/14186464-14186464 FN1089-S Single Base Substitution T-A INTERGENIC HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN428-S.SNP.12:14192153 chr12:014192153 0 W/14192153-14192153 FN428-S Single Base Substitution T-C INTERGENIC HET SNo: 427, Mutant_ID: FN428-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN3542-S.SNP.12:14196377 chr12:014196377 0 W/14196377-14196377 FN3542-S SNP T -> C AC=1;AN=188;BQB=0.688425;DP=3059;DP4=1464,1515,5,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000220626;MQSB=0.911228;RPB=0.890623;SGB=18.2682;VDB=0.461975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1689-S.SNP.12:14198530 chr12:014198530 0 W/14198530-14198530 FN1689-S SNP G -> T AC=1;AN=188;BQB=0.439012;DP=3017;DP4=1819,1162,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00165728;MQB=2.78502e-06;MQSB=0.994579;RPB=0.746135;SGB=23.5329;VDB=0.578572;EFF=INTERGENIC(MODIFIER||||||||||1) FN711-S.SNP.12:14200120 chr12:014200120 0 W/14200120-14200120 FN711-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g24750 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2437.SNP.12:14212544 chr12:014212544 0 W/14212544-14212544 FN2437 SNP G -> A AC=1;AN=200;BQB=0.999748;DP=4093;DP4=1769,2003,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.06278e-11;MQSB=0.991914;RPB=0.467147;SGB=42.5108;VDB=0.691414;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A149|1287|LOC_Os12g24780|protein_coding|CODING|LOC_Os12g24780.1|2|1) FN3709-S.SNP.12:14214821 chr12:014214821 0 W/14214821-14214821 FN3709-S SNP G -> A AC=1;AN=190;BQB=0.468256;DP=2318;DP4=1042,1197,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000249005;MQSB=0.991395;RPB=0.873307;SGB=39.9877;VDB=0.882989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E761K|1287|LOC_Os12g24780|protein_coding|CODING|LOC_Os12g24780.1|5|1) FN2410.SNP.12:14217714 chr12:014217714 0 W/14217714-14217714 FN2410 SNP T -> G AC=1;AN=200;BQB=0.928877;DP=4154;DP4=1890,1992,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.67701e-19;MQSB=0.935907;RPB=0.451069;SGB=115.978;VDB=0.197584;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E814D|1113|LOC_Os12g24790|protein_coding|CODING|LOC_Os12g24790.1|4|1) FN1256-S.SNP.12:14219373 chr12:014219373 0 W/14219373-14219373 FN1256-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g24790 retrotransposon protein, putative, LINE subclass, expressed SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN3692-S.SNP.12:14220122 chr12:014220122 0 W/14220122-14220122 FN3692-S SNP A -> T AC=1;AN=190;BQB=0.551204;DP=2727;DP4=1290,1308,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.54223e-07;MQSB=0.710986;RPB=0.978871;SGB=-14.8836;VDB=0.955739;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|L267Q|1113|LOC_Os12g24790|protein_coding|CODING|LOC_Os12g24790.1|1|1) FN2434.SNP.12:14232524 chr12:014232524 0 W/14232524-14232524 FN2434 SNP C -> T AC=1;AN=200;BQB=0.748173;DP=4914;DP4=2039,2422,5,10;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.0002035;MQB=4.97722e-05;MQSB=0.603673;RPB=0.964909;SGB=24.2746;VDB=0.893321;EFF=INTERGENIC(MODIFIER||||||||||1) FN3326-S.SNP.12:14232524 chr12:014232524 0 W/14232524-14232524 FN3326-S SNP C -> T AC=1;AN=184;BQB=0.999942;DP=2843;DP4=1204,1482,10,7;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.000351741;MQB=1.2818e-08;MQSB=0.949436;RPB=0.378799;SGB=49.835;VDB=0.675241;EFF=INTERGENIC(MODIFIER||||||||||1) FN_949-1.SNP.12:14232524 chr12:014232524 0 W/14232524-14232524 FN_949-1 Single Base Substitution C-T HET SNo: 1503, Mutant_ID: FN_949-1, Generation: M3, Mutations: 60, Genes: 88, Seed availability: Yes. FN1610-S.SNP.12:14233560 chr12:014233560 0 W/14233560-14233560 FN1610-S Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os12g24800 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed SNo: 1326, Mutant_ID: FN1610-S, Generation: M2, Mutations: 89, Genes: 17, Seed availability: Yes. FN-345.SNP.12:14234904 chr12:014234904 0 W/14234904-14234904 FN-345 Single Base Substitution G-C INTERGENIC HET SNo: 336, Mutant_ID: FN-345, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1042-S.SNP.12:14241212 chr12:014241212 0 W/14241212-14241212 FN1042-S Single Base Substitution T-C INTERGENIC HOMO SNo: 937, Mutant_ID: FN1042-S, Generation: M2, Mutations: 77, Genes: 38, Seed availability: Yes. FN4117-S.SNP.12:14245717 chr12:014245717 0 W/14245717-14245717 FN4117-S SNP C -> A AC=1;AN=182;BQB=0.734457;DP=3123;DP4=1539,1520,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.82494e-05;MQSB=0.915402;RPB=0.999998;SGB=44.1115;VDB=0.509155;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctC/ctA|L445|708|LOC_Os12g24820|protein_coding|CODING|LOC_Os12g24820.1|3|1) FN4143-S.SNP.12:14248030 chr12:014248030 0 W/14248030-14248030 FN4143-S SNP A -> G AC=1;AN=170;BQB=0.92897;DP=2406;DP4=1172,1164,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19367e-08;MQSB=0.9577;RPB=0.994083;SGB=61.2001;VDB=0.599011;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F532S|602|LOC_Os12g24830|protein_coding|CODING|LOC_Os12g24830.1|4|1) FN929-S.SNP.12:14250875 chr12:014250875 0 W/14250875-14250875 FN929-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g24830 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN923-S.SNP.12:14253922 chr12:014253922 0 W/14253922-14253922 FN923-S Single Base Substitution A-G INTERGENIC HOMO SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN-186.SNP.12:14256173 chr12:014256173 0 W/14256173-14256173 FN-186 Single Base Substitution G-C INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. W426-1-1.SNP.12:14257857 chr12:014257857 0 W/14257857-14257857 W426-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN1097-S.SNP.12:14258606 chr12:014258606 0 W/14258606-14258606 FN1097-S Single Base Substitution A-T INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1050-S.SNP.12:14259175 chr12:014259175 0 W/14259175-14259175 FN1050-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g24870 SWIM zinc finger family protein, putative, expressed SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN1134-S.SNP.12:14259175 chr12:014259175 0 W/14259175-14259175 FN1134-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g24870 SWIM zinc finger family protein, putative, expressed SNo: 1001, Mutant_ID: FN1134-S, Generation: M2, Mutations: 41, Genes: 140, Seed availability: Yes. FN1602-S.SNP.12:14259175 chr12:014259175 0 W/14259175-14259175 FN1602-S Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os12g24870 SWIM zinc finger family protein, putative, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2421.SNP.12:14259175 chr12:014259175 0 W/14259175-14259175 FN2421 SNP C -> A AC=1;AN=200;BQB=0.833251;DP=4174;DP4=1729,1905,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.23741e-08;MQSB=0.848121;RPB=0.404228;SGB=6.27959;VDB=0.30675;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P25T|411|LOC_Os12g24870|protein_coding|CODING|LOC_Os12g24870.1|1|1) FN4051-S.SNP.12:14259175 chr12:014259175 0 W/14259175-14259175 FN4051-S SNP C -> A AC=2;AN=168;BQB=0.997822;DP=2623;DP4=1124,1362,15,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.02969e-19;MQSB=0.949225;RPB=0.40568;SGB=176.236;VDB=0.941056;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P25T|411|LOC_Os12g24870|protein_coding|CODING|LOC_Os12g24870.1|1|1) FN1459-S.SNP.12:14260677 chr12:014260677 0 W/14260677-14260677 FN1459-S Single Base Substitution C-G STOP_GAINED HET LOC_Os12g24870 SWIM zinc finger family protein, putative, expressed SNo: 1227, Mutant_ID: FN1459-S, Generation: M2, Mutations: 64, Genes: 283, Seed availability: Yes. FN2702-S.SNP.12:14261050 chr12:014261050 0 W/14261050-14261050 FN2702-S SNP A -> G AC=1;AN=198;BQB=0.736599;DP=4909;DP4=2469,2276,10,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.08926e-09;MQSB=0.545844;RPB=0.981809;SGB=58.2954;VDB=0.874434;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccA/ccG|P344|411|LOC_Os12g24870|protein_coding|CODING|LOC_Os12g24870.1|3|1) FN-361.SNP.12:14271598 chr12:014271598 0 W/14271598-14271598 FN-361 Single Base Substitution A-C INTERGENIC HET SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3792-S.SNP.12:14273904 chr12:014273904 0 W/14273904-14273904 FN3792-S SNP T -> C AC=2;AN=190;BQB=0.507345;DP=2849;DP4=1315,1408,12,11;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000351;MQB=7.30214e-07;MQSB=0.650021;RPB=0.478549;SGB=44.0907;VDB=0.835964;EFF=INTERGENIC(MODIFIER||||||||||1) FN2235-S.SNP.12:14274366 chr12:014274366 0 W/14274366-14274366 FN2235-S SNP G -> A AC=1;AN=190;BQB=0.950462;DP=4539;DP4=2201,2072,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000220313;MQB=1.28527e-05;MQSB=0.759506;RPB=0.858504;SGB=21.8853;VDB=0.938151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1269-S.SNP.12:14278209 chr12:014278209 0 W/14278209-14278209 FN1269-S Single Base Substitution A-G INTERGENIC HET SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2230-S.SNP.12:14279009 chr12:014279009 0 W/14279009-14279009 FN2230-S SNP G -> A AC=1;AN=190;BQB=0.797925;DP=4497;DP4=1978,2072,21,74;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0155659;MQB=3.64338e-43;MQSB=1.77496e-06;RPB=7.63899e-10;SGB=-2005.05;VDB=1.92366e-11;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.12:14279150 chr12:014279150 0 W/14279150-14279150 FN2309 SNP T -> A AC=1;AN=192;BQB=0.984895;DP=5036;DP4=2768,1982,12,7;HOB=5.42535e-05;ICB=0.000109072;MQ=38;MQ0F=0.0369341;MQB=0.996577;MQSB=0.000609454;RPB=0.978916;SGB=81.1609;VDB=0.77892;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M117L|134|LOC_Os12g24890|protein_coding|CODING|LOC_Os12g24890.1|4|1) FN2136-S.SNP.12:14280052 chr12:014280052 0 W/14280052-14280052 FN2136-S SNP A -> G AC=1;AN=168;BQB=0.744101;DP=2854;DP4=1477,1349,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.61515e-07;MQSB=0.890258;RPB=0.149913;SGB=-38.9357;VDB=0.555672;EFF=INTRON(MODIFIER||||134|LOC_Os12g24890|protein_coding|CODING|LOC_Os12g24890.1|2|1) FN2331.SNP.12:14281313 chr12:014281313 0 W/14281313-14281313 FN2331 SNP G -> A AC=1;AN=192;BQB=0.998026;DP=4427;DP4=1939,2159,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00542128;MQB=4.61165e-07;MQSB=0.935655;RPB=0.779916;SGB=32.6514;VDB=0.268132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.12:14283473 chr12:014283473 0 W/14283473-14283473 FN3911-S SNP T -> C AC=2;AN=158;BQB=0.930097;DP=2198;DP4=1082,1001,10,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.04187e-07;MQSB=0.000976523;RPB=0.856747;SGB=60.1755;VDB=0.243516;EFF=INTERGENIC(MODIFIER||||||||||1) FN429-S.SNP.12:14283473 chr12:014283473 0 W/14283473-14283473 FN429-S Single Base Substitution T-A INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN3762-S.SNP.12:14284542 chr12:014284542 0 W/14284542-14284542 FN3762-S SNP C -> A AC=1;AN=190;BQB=0.641539;DP=2699;DP4=1271,1327,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000482767;MQSB=0.999361;RPB=0.931457;SGB=35.4339;VDB=0.695961;EFF=INTERGENIC(MODIFIER||||||||||1) FN2698-S.SNP.12:14285489 chr12:014285489 0 W/14285489-14285489 FN2698-S SNP C -> T AC=1;AN=198;BQB=0.816107;DP=4747;DP4=2449,2075,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00800506;MQB=1.65386e-11;MQSB=0.334211;RPB=0.999335;SGB=95.7111;VDB=0.104794;EFF=INTERGENIC(MODIFIER||||||||||1) FN1176-S.SNP.12:14287423 chr12:014287423 0 W/14287423-14287423 FN1176-S Single Base Substitution A-T INTERGENIC HET SNo: 1018, Mutant_ID: FN1176-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN1383-S.SNP.12:14288847 chr12:014288847 0 W/14288847-14288847 FN1383-S Single Base Substitution G-A INTERGENIC HET SNo: 1169, Mutant_ID: FN1383-S, Generation: M2, Mutations: 40, Genes: 8, Seed availability: No. FN2691-S.SNP.12:14289121 chr12:014289121 0 W/14289121-14289121 FN2691-S SNP G -> C AC=1;AN=198;BQB=0.615526;DP=4726;DP4=2338,2117,20,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.81137e-19;MQSB=0.986267;RPB=0.728924;SGB=101.557;VDB=0.406357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2326.SNP.12:14293756 chr12:014293756 0 W/14293756-14293756 FN2326 SNP G -> T AC=1;AN=192;BQB=0.558459;DP=4711;DP4=2145,2294,9,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.80686e-14;MQSB=0.948961;RPB=0.997248;SGB=71.8591;VDB=0.141155;EFF=INTERGENIC(MODIFIER||||||||||1) FN3446-S.SNP.12:14294747 chr12:014294747 0 W/14294747-14294747 FN3446-S SNP G -> A AC=1;AN=184;BQB=0.930672;DP=3221;DP4=1617,1480,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.65054e-12;MQSB=0.723607;RPB=0.683824;SGB=80.3949;VDB=0.908093;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.12:14298373 chr12:014298373 0 W/14298373-14298373 FN2663-S SNP C -> T AC=2;AN=198;BQB=0.134622;DP=4911;DP4=2394,2261,29,21;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.2854e-31;MQSB=0.985529;RPB=0.0584482;SGB=115.456;VDB=0.619404;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.12:14298493 chr12:014298493 0 W/14298493-14298493 FN819-S Single Base Substitution C-T INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN-349.SNP.12:14304402 chr12:014304402 0 W/14304402-14304402 FN-349 Single Base Substitution C-G INTERGENIC HET SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN-132.SNP.12:14304436 chr12:014304436 0 W/14304436-14304436 FN-132 Single Base Substitution A-T INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN1660-S.SNP.12:14304436 chr12:014304436 0 W/14304436-14304436 FN1660-S Single Base Substitution A-T INTERGENIC Homo SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1252-S.SNP.12:14308109 chr12:014308109 0 W/14308109-14308109 FN1252-S Single Base Substitution G-A INTERGENIC HET SNo: 1070, Mutant_ID: FN1252-S, Generation: M2, Mutations: 73, Genes: 40, Seed availability: Yes. FN2791-S.SNP.12:14310145 chr12:014310145 0 W/14310145-14310145 FN2791-S SNP C -> A AC=1;AN=186;BQB=0.882381;DP=3802;DP4=1718,1871,12,7;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.1571e-09;MQSB=0.82006;RPB=0.665553;SGB=34.5346;VDB=0.656876;EFF=STOP_GAINED(HIGH|NONSENSE|Gga/Tga|G715*|759|LOC_Os12g24920|protein_coding|CODING|LOC_Os12g24920.1|6|1) FN1276-S.SNP.12:14313511 chr12:014313511 0 W/14313511-14313511 FN1276-S Single Base Substitution T-A INTRON HOMO SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3664-S.SNP.12:14315179 chr12:014315179 0 W/14315179-14315179 FN3664-S SNP C -> T AC=1;AN=190;BQB=0.946693;DP=3080;DP4=1476,1498,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.30244e-09;MQSB=0.883351;RPB=0.395081;SGB=53.6492;VDB=0.644968;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.12:14316328 chr12:014316328 0 W/14316328-14316328 FN1465-S Single Base Substitution C-A INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN1728-S.SNP.12:14320152 chr12:014320152 0 W/14320152-14320152 FN1728-S SNP G -> A AC=1;AN=188;BQB=0.965074;DP=3206;DP4=1547,1605,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.70299e-11;MQSB=0.822967;RPB=0.997773;SGB=16.3413;VDB=0.961722;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W183*|386|LOC_Os12g24930|protein_coding|CODING|LOC_Os12g24930.1|3|1) FN4107-S.SNP.12:14324301 chr12:014324301 0 W/14324301-14324301 FN4107-S SNP A -> T AC=1;AN=182;BQB=0.960264;DP=3050;DP4=1543,1408,7,2;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.70732e-06;MQSB=0.846321;RPB=0.390848;SGB=35.0899;VDB=0.458922;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.12:14329702 chr12:014329702 0 W/14329702-14329702 FN_546-3-1 Single Base Substitution A-T HET SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN2234-S.SNP.12:14332932 chr12:014332932 0 W/14332932-14332932 FN2234-S SNP G -> T AC=1;AN=190;BQB=0.951211;DP=4681;DP4=2412,1942,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021363;MQB=5.58131e-09;MQSB=0.29655;RPB=0.945481;SGB=43.2083;VDB=0.217395;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.12:14334991 chr12:014334991 0 W/14334991-14334991 FN-287 Single Base Substitution G-C INTRON HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN2631-S.SNP.12:14339182 chr12:014339182 0 W/14339182-14339182 FN2631-S SNP G -> A AC=1;AN=200;BQB=0.940193;DP=4607;DP4=2289,2077,10,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.57806e-07;MQSB=0.986849;RPB=0.729622;SGB=54.2646;VDB=0.215402;EFF=INTRON(MODIFIER||||447|LOC_Os12g24980|protein_coding|CODING|LOC_Os12g24980.1|2|1) FN_827-1.SNP.12:14340035 chr12:014340035 0 W/14340035-14340035 FN_827-1 Single Base Substitution G-A HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN2439.SNP.12:14346858 chr12:014346858 0 W/14346858-14346858 FN2439 SNP C -> A AC=2;AN=200;BQB=0.976181;DP=4317;DP4=1983,2068,10,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000231642;MQB=2.72877e-14;MQSB=0.867808;RPB=0.999785;SGB=-38.4742;VDB=0.977034;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agT|R116S|1123|LOC_Os12g24990|protein_coding|CODING|LOC_Os12g24990.1|1|1) FN2439.SNP.12:14347640 chr12:014347640 0 W/14347640-14347640 FN2439 SNP C -> G AC=2;AN=200;BQB=0.872702;DP=4730;DP4=2389,2047,10,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.0523e-14;MQSB=0.976058;RPB=0.651993;SGB=45.1159;VDB=0.184919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3657-S.SNP.12:14349628 chr12:014349628 0 W/14349628-14349628 FN3657-S SNP G -> A AC=1;AN=190;BQB=0.733746;DP=2227;DP4=914,1233,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000756797;MQSB=1;RPB=0.937151;SGB=35.4339;VDB=0.662733;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.12:14353302 chr12:014353302 0 W/14353302-14353302 FN2188-S SNP A -> G AC=2;AN=190;BQB=0.82525;DP=5040;DP4=2434,2169,27,24;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000396825;MQB=8.17046e-24;MQSB=0.537503;RPB=0.37001;SGB=171.148;VDB=0.785546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2594-S.SNP.12:14355216 chr12:014355216 0 W/14355216-14355216 FN2594-S SNP G -> A AC=1;AN=198;BQB=0.757322;DP=4051;DP4=1961,1846,8,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=4.5481e-07;MQSB=0.91824;RPB=0.998503;SGB=2.96892;VDB=0.343417;EFF=INTRON(MODIFIER||||682|LOC_Os12g25000|protein_coding|CODING|LOC_Os12g25000.1|2|1) FN2594-S.SNP.12:14355217 chr12:014355217 0 W/14355217-14355217 FN2594-S SNP G -> T AC=1;AN=198;BQB=0.998711;DP=4064;DP4=1973,1877,8,3;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.45306e-05;MQSB=0.997138;RPB=0.995503;SGB=29.3637;VDB=0.431135;EFF=INTRON(MODIFIER||||682|LOC_Os12g25000|protein_coding|CODING|LOC_Os12g25000.1|2|1) FN1415-S.SNP.12:14356011 chr12:014356011 0 W/14356011-14356011 FN1415-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g25000 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2538-S.SNP.12:14357279 chr12:014357279 0 W/14357279-14357279 FN2538-S SNP T -> A AC=1;AN=198;BQB=0.393677;DP=3533;DP4=1515,1825,3,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000283046;MQB=6.09868e-05;MQSB=0.0768564;RPB=0.513007;SGB=35.7638;VDB=0.414654;EFF=INTERGENIC(MODIFIER||||||||||1) FN1376-S.SNP.12:14360592 chr12:014360592 0 W/14360592-14360592 FN1376-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g25030 hypothetical protein SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN-304.SNP.12:14362037 chr12:014362037 0 W/14362037-14362037 FN-304 Single Base Substitution C-A INTRON HOMO SNo: 299, Mutant_ID: FN-304, Generation: M2, Mutations: 48, Genes: 15, Seed availability: No. FN1465-S.SNP.12:14362123 chr12:014362123 0 W/14362123-14362123 FN1465-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN2751-S.SNP.12:14365803 chr12:014365803 0 W/14365803-14365803 FN2751-S SNP T -> C AC=1;AN=200;BQB=0.424481;DP=4889;DP4=2523,2062,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.7378e-15;MQSB=0.934844;RPB=0.9973;SGB=72.7161;VDB=0.0116483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1430-S.SNP.12:14368391 chr12:014368391 0 W/14368391-14368391 FN1430-S Single Base Substitution C-G INTRON HET SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN2486.SNP.12:14370051 chr12:014370051 0 W/14370051-14370051 FN2486 SNP C -> G AC=1;AN=200;BQB=0.986999;DP=4482;DP4=2094,2152,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.60066e-12;MQSB=0.976942;RPB=0.718471;SGB=12.7003;VDB=0.128059;EFF=INTRON(MODIFIER||||881|LOC_Os12g25040|protein_coding|CODING|LOC_Os12g25040.1|7|1) FN4240-S.SNP.12:14371343 chr12:014371343 0 W/14371343-14371343 FN4240-S SNP C -> T AC=1;AN=170;BQB=0.974282;DP=2343;DP4=1098,998,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.02457e-05;MQSB=0.916758;RPB=0.995185;SGB=17.6652;VDB=0.674881;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E538K|881|LOC_Os12g25040|protein_coding|CODING|LOC_Os12g25040.1|5|1) FN3992-S.SNP.12:14371991 chr12:014371991 0 W/14371991-14371991 FN3992-S SNP T -> G AC=2;AN=168;BQB=0.999152;DP=2261;DP4=1084,1058,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.4967e-13;MQSB=0.848985;RPB=0.668786;SGB=72.4869;VDB=0.867193;EFF=INTRON(MODIFIER||||881|LOC_Os12g25040|protein_coding|CODING|LOC_Os12g25040.1|3|1) FN3824-S.SNP.12:14372910 chr12:014372910 0 W/14372910-14372910 FN3824-S SNP T -> G AC=2;AN=190;BQB=0.970557;DP=2811;DP4=1394,1288,15,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.61424e-16;MQSB=0.398042;RPB=0.923559;SGB=126.511;VDB=0.63098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aCg|K311T|881|LOC_Os12g25040|protein_coding|CODING|LOC_Os12g25040.1|2|1) FN1213-S.SNP.12:14375785 chr12:014375785 0 W/14375785-14375785 FN1213-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1042, Mutant_ID: FN1213-S, Generation: M2, Mutations: 71, Genes: 185, Seed availability: Yes. FN973-S.SNP.12:14379986 chr12:014379986 0 W/14379986-14379986 FN973-S Single Base Substitution C-A INTRON HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN836-S.SNP.12:14383284 chr12:014383284 0 W/14383284-14383284 FN836-S Single Base Substitution G-A INTRON HOMO SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1035-S.SNP.12:14385621 chr12:014385621 0 W/14385621-14385621 FN1035-S Single Base Substitution C-T INTERGENIC HET SNo: 931, Mutant_ID: FN1035-S, Generation: M2, Mutations: 70, Genes: 11, Seed availability: Yes. FN2412.SNP.12:14386291 chr12:014386291 0 W/14386291-14386291 FN2412 SNP C -> A AC=2;AN=200;BQB=0.9744;DP=4837;DP4=2128,2324,25,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.14327e-19;MQSB=0.891663;RPB=0.937551;SGB=1.41385;VDB=0.126894;EFF=INTERGENIC(MODIFIER||||||||||1) FN3501-S.SNP.12:14386291 chr12:014386291 0 W/14386291-14386291 FN3501-S SNP C -> A AC=2;AN=188;BQB=0.77087;DP=2727;DP4=1435,1188,7,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.44513e-09;MQSB=0.998338;RPB=0.582298;SGB=8.62479;VDB=0.752894;EFF=INTERGENIC(MODIFIER||||||||||1) FN-121.SNP.12:14391264 chr12:014391264 0 W/14391264-14391264 FN-121 Single Base Substitution G-A INTERGENIC HOMO SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN3520-S.SNP.12:14391662 chr12:014391662 0 W/14391662-14391662 FN3520-S SNP T -> C AC=1;AN=188;BQB=0.761615;DP=3656;DP4=1735,1764,10,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.26005e-12;MQSB=0.97238;RPB=0.92271;SGB=80.782;VDB=0.842856;EFF=INTERGENIC(MODIFIER||||||||||1) FN916-S.SNP.12:14393286 chr12:014393286 0 W/14393286-14393286 FN916-S Single Base Substitution G-T INTERGENIC HET SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN419-S.SNP.12:14394370 chr12:014394370 0 W/14394370-14394370 FN419-S Single Base Substitution A-G INTERGENIC HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN2560-S.SNP.12:14401641 chr12:014401641 0 W/14401641-14401641 FN2560-S SNP A -> G AC=1;AN=198;BQB=0.879172;DP=4400;DP4=2122,2022,3,5;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0322727;MQB=0.0289984;MQSB=4.80144e-12;RPB=0.966593;SGB=31.1689;VDB=0.608129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTa/tCa|L453S|583|LOC_Os12g25070|protein_coding|CODING|LOC_Os12g25070.1|3|1) FN1565-S.SNP.12:14409151 chr12:014409151 0 W/14409151-14409151 FN1565-S Single Base Substitution C-T SYNONYMOUS_CODING Homo SNo: 1306, Mutant_ID: FN1565-S, Generation: M2, Mutations: 81, Genes: 27, Seed availability: Yes. FN898-S.SNP.12:14410128 chr12:014410128 0 W/14410128-14410128 FN898-S Single Base Substitution A-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN412-S.SNP.12:14413480 chr12:014413480 0 W/14413480-14413480 FN412-S Single Base Substitution C-T INTERGENIC HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN-311.SNP.12:14414347 chr12:014414347 0 W/14414347-14414347 FN-311 Single Base Substitution C-A INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3765-S.SNP.12:14415532 chr12:014415532 0 W/14415532-14415532 FN3765-S SNP G -> A AC=1;AN=190;BQB=0.995801;DP=3048;DP4=1427,1505,7,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.89781e-11;MQSB=0.191455;RPB=0.47876;SGB=53.8699;VDB=0.245978;EFF=INTRON(MODIFIER||||835|LOC_Os12g25100|protein_coding|CODING|LOC_Os12g25100.1|1|1) FN1313-S.SNP.12:14419075 chr12:014419075 0 W/14419075-14419075 FN1313-S Single Base Substitution G-A INTERGENIC HET SNo: 1116, Mutant_ID: FN1313-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN-225.SNP.12:14422434 chr12:014422434 0 W/14422434-14422434 FN-225 Single Base Substitution G-C INTERGENIC HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN1228-S.SNP.12:14422711 chr12:014422711 0 W/14422711-14422711 FN1228-S Single Base Substitution A-C INTERGENIC HET SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. W554-1-1.SNP.12:14424607 chr12:014424607 0 W/14424607-14424607 W554-1-1 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g25120 core histone H2A/H2B/H3/H4, putative, expressed SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2660-S.SNP.12:14430760 chr12:014430760 0 W/14430760-14430760 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.966114;DP=4986;DP4=2542,2172,16,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12531e-13;MQSB=0.939713;RPB=0.59655;SGB=72.7161;VDB=0.444965;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.12:14433438 chr12:014433438 0 W/14433438-14433438 FN725-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN2751-S.SNP.12:14442252 chr12:014442252 0 W/14442252-14442252 FN2751-S SNP C -> T AC=1;AN=200;BQB=0.305344;DP=3603;DP4=2233,1164,13,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=8.44998e-11;MQSB=0.108002;RPB=0.717768;SGB=61.9006;VDB=0.701568;EFF=INTERGENIC(MODIFIER||||||||||1) FN1701-S.SNP.12:14444676 chr12:014444676 0 W/14444676-14444676 FN1701-S SNP C -> A AC=2;AN=188;BQB=0.0477598;DP=3024;DP4=1301,1683,11,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.74233e-09;MQSB=0.998302;RPB=0.967303;SGB=-11.1967;VDB=0.879098;EFF=INTERGENIC(MODIFIER||||||||||1) FN1719-S.SNP.12:14448089 chr12:014448089 0 W/14448089-14448089 FN1719-S SNP C -> T AC=2;AN=188;BQB=0.200783;DP=1979;DP4=828,1098,4,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.30506e-06;MQSB=0.963587;RPB=0.761286;SGB=28.6195;VDB=0.618656;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G52|111|LOC_Os12g25160|protein_coding|CODING|LOC_Os12g25160.1|2|1) FN2648-S.SNP.12:14456304 chr12:014456304 0 W/14456304-14456304 FN2648-S SNP T -> A AC=1;AN=200;BQB=0.479768;DP=5416;DP4=2409,2796,25,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.43413e-22;MQSB=0.949204;RPB=0.94246;SGB=123.188;VDB=0.324411;EFF=UTR_3_PRIME(MODIFIER||67||201|LOC_Os12g25180|protein_coding|CODING|LOC_Os12g25180.1|3|1) FN4302-S.SNP.12:14461944 chr12:014461944 0 W/14461944-14461944 FN4302-S SNP G -> A AC=1;AN=170;BQB=0.9025;DP=2138;DP4=1275,804,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000935454;MQB=2.70921e-05;MQSB=0.212862;RPB=0.110066;SGB=21.1076;VDB=0.156836;EFF=INTERGENIC(MODIFIER||||||||||1) FN3956-S.SNP.12:14462291 chr12:014462291 0 W/14462291-14462291 FN3956-S SNP G -> T AC=1;AN=168;BQB=0.996458;DP=2421;DP4=1085,1243,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.49996e-08;MQSB=0.594975;RPB=0.857625;SGB=2.75988;VDB=0.427042;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.12:14464052 chr12:014464052 0 W/14464052-14464052 FN-305 Single Base Substitution G-A INTERGENIC HOMO SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN2323.SNP.12:14464461 chr12:014464461 0 W/14464461-14464461 FN2323 SNP A -> T AC=1;AN=192;BQB=0.536819;DP=5168;DP4=2165,2525,15,20;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.21236e-20;MQSB=0.378504;RPB=0.807556;SGB=114.631;VDB=0.299948;EFF=INTERGENIC(MODIFIER||||||||||1) FN2323.SNP.12:14464466 chr12:014464466 0 W/14464466-14464466 FN2323 SNP A -> T AC=1;AN=192;BQB=0.477644;DP=5200;DP4=2232,2641,16,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.28211e-21;MQSB=0.341485;RPB=0.47124;SGB=72.5078;VDB=0.271932;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.12:14470891 chr12:014470891 0 W/14470891-14470891 FN2305 SNP C -> A AC=1;AN=192;BQB=0.163243;DP=4851;DP4=2421,2054,14,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.24561e-12;MQSB=0.983714;RPB=0.711341;SGB=-39.2487;VDB=0.62103;EFF=INTERGENIC(MODIFIER||||||||||1) FN3713-S.SNP.12:14478004 chr12:014478004 0 W/14478004-14478004 FN3713-S SNP C -> T AC=2;AN=190;BQB=0.979482;DP=2875;DP4=1480,1248,21,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.1513e-18;MQSB=0.979414;RPB=0.788302;SGB=149.281;VDB=0.0411608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.12:14481630 chr12:014481630 0 W/14481630-14481630 FN1643-S Single Base Substitution G-C INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN1643-S.SNP.12:14481631 chr12:014481631 0 W/14481631-14481631 FN1643-S Single Base Substitution G-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN915-S.SNP.12:14489385 chr12:014489385 0 W/14489385-14489385 FN915-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g25200 chloride transporter, chloride channel family, putative, expressed SNo: 821, Mutant_ID: FN915-S, Generation: M2, Mutations: 77, Genes: 13, Seed availability: Yes. FN1184-S.SNP.12:14494881 chr12:014494881 0 W/14494881-14494881 FN1184-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1022, Mutant_ID: FN1184-S, Generation: M2, Mutations: 64, Genes: 4, Seed availability: Yes. FN3105-S.SNP.12:14498624 chr12:014498624 0 W/14498624-14498624 FN3105-S SNP T -> C AC=2;AN=184;BQB=0.999981;DP=1439;DP4=714,657,8,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.05677e-06;MQSB=0.208147;RPB=0.539207;SGB=48.7425;VDB=0.761804;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.12:14502788 chr12:014502788 0 W/14502788-14502788 FN2318 SNP C -> T AC=1;AN=192;BQB=0.649641;DP=5080;DP4=2401,2346,15,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.74172e-17;MQSB=0.968003;RPB=0.767541;SGB=27.6913;VDB=0.693783;EFF=INTERGENIC(MODIFIER||||||||||1) FN1000-S.SNP.12:14504630 chr12:014504630 0 W/14504630-14504630 FN1000-S Single Base Substitution C-A INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2325.SNP.12:14506387 chr12:014506387 0 W/14506387-14506387 FN2325 SNP G -> A AC=2;AN=192;BQB=0.707362;DP=4840;DP4=2155,2407,16,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=1.85142e-19;MQSB=0.955815;RPB=0.369064;SGB=121.76;VDB=0.65865;EFF=INTERGENIC(MODIFIER||||||||||1) FN1687-S.SNP.12:14506743 chr12:014506743 0 W/14506743-14506743 FN1687-S SNP G -> A AC=1;AN=188;BQB=0.97322;DP=1830;DP4=876,913,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.02648e-05;MQSB=0.983613;RPB=0.985774;SGB=21.8113;VDB=0.365915;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.12:14508232 chr12:014508232 0 W/14508232-14508232 FN2723-S SNP C -> T AC=1;AN=200;BQB=0.934729;DP=4646;DP4=2152,2282,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.57718e-11;MQSB=0.994545;RPB=0.931313;SGB=29.4849;VDB=0.102938;EFF=INTRON(MODIFIER||||583|LOC_Os12g25220|protein_coding|CODING|LOC_Os12g25220.1|4|1) FN3472-S.SNP.12:14512718 chr12:014512718 0 W/14512718-14512718 FN3472-S SNP T -> C AC=1;AN=184;BQB=0.948163;DP=2959;DP4=1654,1148,18,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.52959e-14;MQSB=0.0515272;RPB=0.732306;SGB=26.5856;VDB=0.325392;EFF=INTERGENIC(MODIFIER||||||||||1) FN2246-S.SNP.12:14512807 chr12:014512807 0 W/14512807-14512807 FN2246-S SNP G -> A AC=2;AN=190;BQB=0.859661;DP=4891;DP4=2135,2482,16,8;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000204457;MQB=5.88812e-14;MQSB=0.90876;RPB=0.9914;SGB=75.1932;VDB=0.0782354;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:14513032 chr12:014513032 0 W/14513032-14513032 FN1520-S Single Base Substitution A-T INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2242-S.SNP.12:14515445 chr12:014515445 0 W/14515445-14515445 FN2242-S SNP G -> A AC=1;AN=190;BQB=0.280139;DP=4782;DP4=2242,2299,7,17;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.18104e-13;MQSB=0.572771;RPB=0.999007;SGB=46.6446;VDB=0.980393;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.12:14516546 chr12:014516546 0 W/14516546-14516546 FN2630-S SNP T -> A AC=1;AN=200;BQB=0.647822;DP=4677;DP4=2011,2205,13,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.00299337;MQB=0.253133;MQSB=2.08025e-15;RPB=0.998484;SGB=65.5058;VDB=0.517404;EFF=INTERGENIC(MODIFIER||||||||||1) FN1276-S.SNP.12:14519964 chr12:014519964 0 W/14519964-14519964 FN1276-S Single Base Substitution G-C INTRON HET SNo: 1090, Mutant_ID: FN1276-S, Generation: M2, Mutations: 75, Genes: 29, Seed availability: Yes. FN3783-S.SNP.12:14520502 chr12:014520502 0 W/14520502-14520502 FN3783-S SNP G -> A AC=2;AN=190;BQB=0.936495;DP=2884;DP4=1116,1662,6,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.55468e-11;MQSB=0.581224;RPB=0.637077;SGB=90.0802;VDB=0.434801;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L322|425|LOC_Os12g25250|protein_coding|CODING|LOC_Os12g25250.1|2|1) FN2095-S.SNP.12:14525845 chr12:014525845 0 W/14525845-14525845 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.0440647;DP=3700;DP4=1855,1772,22,19;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00297297;MQB=1.3958e-08;MQSB=0.278578;RPB=0.806474;SGB=-368.863;VDB=0.210458;EFF=INTERGENIC(MODIFIER||||||||||1) FN2472.SNP.12:14527864 chr12:014527864 0 W/14527864-14527864 FN2472 SNP C -> T AC=1;AN=200;BQB=0.26992;DP=3710;DP4=1677,1616,10,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.13766e-07;MQSB=0.324526;RPB=0.755123;SGB=77.2904;VDB=0.143887;EFF=INTERGENIC(MODIFIER||||||||||1) FN2273-S.SNP.12:14528022 chr12:014528022 0 W/14528022-14528022 FN2273-S SNP G -> A AC=1;AN=190;BQB=0.530439;DP=3198;DP4=1378,1564,2,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000625391;MQB=4.29334e-05;MQSB=3.27184e-07;RPB=0.90434;SGB=21.8853;VDB=0.628185;EFF=INTERGENIC(MODIFIER||||||||||1) FN-156.SNP.12:14533888 chr12:014533888 0 W/14533888-14533888 FN-156 Single Base Substitution G-A INTERGENIC HET SNo: 156, Mutant_ID: FN-156, Generation: M2, Mutations: 119, Genes: 19, Seed availability: Yes. FN1401-S.SNP.12:14534124 chr12:014534124 0 W/14534124-14534124 FN1401-S Single Base Substitution T-A INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN898-S.SNP.12:14534439 chr12:014534439 0 W/14534439-14534439 FN898-S Single Base Substitution A-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN1749-S.SNP.12:14535197 chr12:014535197 0 W/14535197-14535197 FN1749-S SNP G -> A AC=2;AN=188;BQB=0.740698;DP=3602;DP4=1792,1755,23,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.1275e-21;MQSB=0.997305;RPB=0.347854;SGB=-47.8688;VDB=0.612307;EFF=INTERGENIC(MODIFIER||||||||||1) FN2765-S.SNP.12:14551657 chr12:014551657 0 W/14551657-14551657 FN2765-S SNP T -> A AC=2;AN=198;BQB=0.985565;DP=4416;DP4=2427,1733,26,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.13903e-26;MQSB=0.991843;RPB=0.829836;SGB=94.2223;VDB=0.223943;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.12:14553236 chr12:014553236 0 W/14553236-14553236 FN870-S Single Base Substitution A-T INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN-120.SNP.12:14554936 chr12:014554936 0 W/14554936-14554936 FN-120 Single Base Substitution G-A INTERGENIC HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN456-S.SNP.12:14554936 chr12:014554936 0 W/14554936-14554936 FN456-S Single Base Substitution G-A INTERGENIC HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN591-S.SNP.12:14554936 chr12:014554936 0 W/14554936-14554936 FN591-S Single Base Substitution G-A INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.12:14554936 chr12:014554936 0 W/14554936-14554936 FN837-S Single Base Substitution G-A INTERGENIC HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN2297.SNP.12:14555120 chr12:014555120 0 W/14555120-14555120 FN2297 SNP C -> T AC=1;AN=192;BQB=0.218082;DP=3714;DP4=2131,1341,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.043888;MQB=0.0281042;MQSB=0;RPB=0.653924;SGB=2.66176;VDB=0.494175;EFF=INTERGENIC(MODIFIER||||||||||1) FN4129-S.SNP.12:14560306 chr12:014560306 0 W/14560306-14560306 FN4129-S SNP G -> A AC=1;AN=182;BQB=0.741716;DP=3005;DP4=1360,1570,1,11;HOB=6.03792e-05;ICB=0.000121422;MQ=47;MQ0F=0.00998336;MQB=0.000286591;MQSB=0.000717854;RPB=0.549276;SGB=32.1169;VDB=0.511287;EFF=INTERGENIC(MODIFIER||||||||||1) FN3415-S.SNP.12:14561136 chr12:014561136 0 W/14561136-14561136 FN3415-S SNP T -> A AC=1;AN=184;BQB=0.896649;DP=2799;DP4=1481,1222,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.18721;MQB=0.9283;MQSB=1.79349e-23;RPB=0.92053;SGB=44.2207;VDB=0.556941;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.12:14564221 chr12:014564221 0 W/14564221-14564221 FN3579-S SNP G -> A AC=1;AN=188;BQB=0.793608;DP=2669;DP4=1299,1306,7,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00337205;MQB=1.61155e-06;MQSB=0.997111;RPB=0.999375;SGB=71.6954;VDB=0.613291;EFF=INTRON(MODIFIER||||1342|LOC_Os12g25300|protein_coding|CODING|LOC_Os12g25300.1|4|1) FN-171.SNP.12:14567988 chr12:014567988 0 W/14567988-14567988 FN-171 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g25300 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN1131-S.SNP.12:14570736 chr12:014570736 0 W/14570736-14570736 FN1131-S Single Base Substitution G-C INTERGENIC HOMO SNo: 999, Mutant_ID: FN1131-S, Generation: M2, Mutations: 50, Genes: 20, Seed availability: Yes. FN3306-S.SNP.12:14570933 chr12:014570933 0 W/14570933-14570933 FN3306-S SNP T -> A AC=2;AN=184;BQB=0.553993;DP=3044;DP4=1571,1353,18,15;HOB=0.0215028;ICB=0.494625;MQ=42;MQ0F=0.00821288;MQB=0.184678;MQSB=0.00190555;RPB=0.16662;SGB=143.7;VDB=0.834937;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.12:14571780 chr12:014571780 0 W/14571780-14571780 FN3824-S SNP C -> A AC=2;AN=190;BQB=0.891684;DP=3035;DP4=1532,1371,15,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.73179e-13;MQSB=0.785437;RPB=0.852703;SGB=100.07;VDB=0.637998;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.12:14572267 chr12:014572267 0 W/14572267-14572267 FN3419-S SNP G -> T AC=1;AN=184;BQB=0.749402;DP=3551;DP4=1598,1828,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000281611;MQB=8.58854e-10;MQSB=0.428461;RPB=0.827307;SGB=49.835;VDB=0.396728;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.12:14572268 chr12:014572268 0 W/14572268-14572268 FN3419-S SNP A -> C AC=1;AN=184;BQB=0.722209;DP=3545;DP4=1596,1725,7,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000282087;MQB=1.04989e-07;MQSB=0.430847;RPB=0.920504;SGB=9.8459;VDB=0.380423;EFF=INTERGENIC(MODIFIER||||||||||1) FN-292.SNP.12:14579859 chr12:014579859 0 W/14579859-14579859 FN-292 Single Base Substitution C-A INTERGENIC HET SNo: 288, Mutant_ID: FN-292, Generation: M2, Mutations: 54, Genes: 18, Seed availability: Yes. W554-1-1.SNP.12:14581206 chr12:014581206 0 W/14581206-14581206 W554-1-1 Single Base Substitution G-A INTERGENIC HET SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN-103.SNP.12:14584981 chr12:014584981 0 W/14584981-14584981 FN-103 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 103, Mutant_ID: FN-103, Generation: M2, Mutations: 46, Genes: 7, Seed availability: Yes. FN484-S.SNP.12:14584981 chr12:014584981 0 W/14584981-14584981 FN484-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 482, Mutant_ID: FN484-S, Generation: M2, Mutations: 62, Genes: 15, Seed availability: Yes. FN2462.SNP.12:14585014 chr12:014585014 0 W/14585014-14585014 FN2462 SNP T -> A AC=1;AN=200;BQB=0.825927;DP=4579;DP4=2261,2091,18,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000655165;MQB=1.27345e-12;MQSB=0.364861;RPB=0.835051;SGB=42.5108;VDB=0.702192;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaT|E1891D|2013|LOC_Os12g25320|protein_coding|CODING|LOC_Os12g25320.1|13|1) FN3443-S.SNP.12:14585570 chr12:014585570 0 W/14585570-14585570 FN3443-S SNP C -> T AC=1;AN=184;BQB=0.291828;DP=2668;DP4=1328,1265,8,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00073e-08;MQSB=0.905453;RPB=0.816197;SGB=33.3622;VDB=0.681326;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V1764I|2013|LOC_Os12g25320|protein_coding|CODING|LOC_Os12g25320.1|12|1) FN_N1-26-1.SNP.12:14588983 chr12:014588983 0 W/14588983-14588983 FN_N1-26-1 Single Base Substitution C-T Homo SNo: 1393, Mutant_ID: FN_N1-26-1, Generation: M3, Mutations: 61, Genes: 21, Seed availability: Yes. FN4253-S.SNP.12:14596257 chr12:014596257 0 W/14596257-14596257 FN4253-S SNP C -> G AC=1;AN=170;BQB=0.9981;DP=2181;DP4=1197,880,12,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.85057e-10;MQSB=0.851569;RPB=0.975578;SGB=24.7692;VDB=0.000972667;EFF=INTERGENIC(MODIFIER||||||||||1) FN2124-S.SNP.12:14600119 chr12:014600119 0 W/14600119-14600119 FN2124-S SNP A -> G AC=1;AN=168;BQB=0.333925;DP=3534;DP4=1776,1693,17,17;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.9024e-16;MQSB=0.990551;RPB=0.756761;SGB=-162.179;VDB=0.22918;EFF=INTERGENIC(MODIFIER||||||||||1) FN-105.SNP.12:14600409 chr12:014600409 0 W/14600409-14600409 FN-105 Single Base Substitution T-A INTERGENIC HET SNo: 105, Mutant_ID: FN-105, Generation: M2, Mutations: 54, Genes: 55, Seed availability: Yes. FN2174-S.SNP.12:14601181 chr12:014601181 0 W/14601181-14601181 FN2174-S SNP A -> G AC=1;AN=168;BQB=0.124027;DP=3753;DP4=1858,1866,14,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.16746e-07;MQSB=0.891151;RPB=0.99287;SGB=7.05233;VDB=0.362884;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.12:14603093 chr12:014603093 0 W/14603093-14603093 FN3393-S SNP G -> A AC=1;AN=184;BQB=0.966929;DP=2980;DP4=1547,1342,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.06544e-09;MQSB=0.98933;RPB=0.766512;SGB=62.3078;VDB=0.276813;EFF=INTERGENIC(MODIFIER||||||||||1) FN870-S.SNP.12:14607548 chr12:014607548 0 W/14607548-14607548 FN870-S Single Base Substitution C-G INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN993-S.SNP.12:14608446 chr12:014608446 0 W/14608446-14608446 FN993-S Single Base Substitution T-G INTRON HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2324.SNP.12:14608495 chr12:014608495 0 W/14608495-14608495 FN2324 SNP C -> T AC=1;AN=192;BQB=0.981332;DP=4499;DP4=2418,1745,17,15;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.00533452;MQB=8.66121e-15;MQSB=0.171608;RPB=0.213742;SGB=-42.2982;VDB=0.742613;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S67F|590|LOC_Os12g25330|protein_coding|CODING|LOC_Os12g25330.1|3|1) FN3411-S.SNP.12:14608850 chr12:014608850 0 W/14608850-14608850 FN3411-S SNP A -> G AC=1;AN=184;BQB=0.934842;DP=2846;DP4=1518,1245,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0477864;MQB=0.673924;MQSB=0.210479;RPB=0.984183;SGB=18.1394;VDB=0.561637;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaA/gaG|E185|590|LOC_Os12g25330|protein_coding|CODING|LOC_Os12g25330.1|3|1) FN587-S.SNP.12:14620290 chr12:014620290 0 W/14620290-14620290 FN587-S Single Base Substitution G-A INTERGENIC HET SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN1032-S.SNP.12:14621796 chr12:014621796 0 W/14621796-14621796 FN1032-S Single Base Substitution T-A INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1485-S.SNP.12:14622825 chr12:014622825 0 W/14622825-14622825 FN1485-S Single Base Substitution T-C INTERGENIC HET SNo: 1249, Mutant_ID: FN1485-S, Generation: M2, Mutations: 100, Genes: 24, Seed availability: Yes. FN3301-S.SNP.12:14629870 chr12:014629870 0 W/14629870-14629870 FN3301-S SNP C -> T AC=1;AN=184;BQB=0.961842;DP=3002;DP4=1753,1156,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.98505e-06;MQSB=0.947258;RPB=0.999716;SGB=44.2207;VDB=0.809714;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A142V|305|LOC_Os12g25350|protein_coding|CODING|LOC_Os12g25350.1|3|1) FN-127.SNP.12:14633079 chr12:014633079 0 W/14633079-14633079 FN-127 Single Base Substitution T-C INTRON HET SNo: 127, Mutant_ID: FN-127, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN938-S.SNP.12:14633628 chr12:014633628 0 W/14633628-14633628 FN938-S Single Base Substitution G-T INTRON HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-374.SNP.12:14637288 chr12:014637288 0 W/14637288-14637288 FN-374 Single Base Substitution G-A INTERGENIC HET SNo: 363, Mutant_ID: FN-374, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN4234-S.SNP.12:14638366 chr12:014638366 0 W/14638366-14638366 FN4234-S SNP G -> A AC=1;AN=170;BQB=0.785991;DP=2179;DP4=892,1227,5,9;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.96831e-09;MQSB=0.779969;RPB=0.917524;SGB=56.7575;VDB=0.329867;EFF=INTERGENIC(MODIFIER||||||||||1) FN2563-S.SNP.12:14639308 chr12:014639308 0 W/14639308-14639308 FN2563-S SNP T -> C AC=2;AN=198;BQB=0.359358;DP=3823;DP4=2117,1481,8,7;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.92892e-08;MQSB=0.947924;RPB=0.61941;SGB=63.3342;VDB=0.0628853;EFF=INTERGENIC(MODIFIER||||||||||1) FN526-S.SNP.12:14640052 chr12:014640052 0 W/14640052-14640052 FN526-S Single Base Substitution T-C INTERGENIC HET SNo: 524, Mutant_ID: FN526-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN798-S.SNP.12:14642790 chr12:014642790 0 W/14642790-14642790 FN798-S Single Base Substitution A-C INTRON HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. W472-5-1.SNP.12:14643541 chr12:014643541 0 W/14643541-14643541 W472-5-1 Single Base Substitution G-A INTRON HOMO SNo: 1420, Mutant_ID: W472-5-1, Generation: M2, Mutations: 66, Genes: 13, Seed availability: Yes. FN3845-S.SNP.12:14646485 chr12:014646485 0 W/14646485-14646485 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.937785;DP=2170;DP4=898,1182,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0;MQB=0.00494715;MQSB=0.0751903;RPB=0.850137;SGB=26.3271;VDB=0.462061;EFF=INTERGENIC(MODIFIER||||||||||1) FN1716-S.SNP.12:14650916 chr12:014650916 0 W/14650916-14650916 FN1716-S SNP C -> T AC=2;AN=188;BQB=0.997162;DP=2993;DP4=1854,1067,32,19;HOB=0.0210502;ICB=0.494738;MQ=42;MQ0F=0.00735048;MQB=0.000107206;MQSB=0.0370664;RPB=0.989787;SGB=160.605;VDB=0.548493;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggt/Agt|G42S|483|LOC_Os12g25390|protein_coding|CODING|LOC_Os12g25390.1|1|1) FN661-S.SNP.12:14668210 chr12:014668210 0 W/14668210-14668210 FN661-S Single Base Substitution G-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2274-S.SNP.12:14668462 chr12:014668462 0 W/14668462-14668462 FN2274-S SNP C -> T AC=1;AN=190;BQB=0.6699;DP=4239;DP4=2027,1847,16,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000235905;MQB=4.62992e-12;MQSB=0.0609631;RPB=0.818575;SGB=108.296;VDB=0.151526;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.12:14672665 chr12:014672665 0 W/14672665-14672665 FN-132 Single Base Substitution C-A INTERGENIC HOMO SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN466-S.SNP.12:14673249 chr12:014673249 0 W/14673249-14673249 FN466-S Single Base Substitution C-T INTERGENIC HET SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN389-S.SNP.12:14673412 chr12:014673412 0 W/14673412-14673412 FN389-S Single Base Substitution C-T INTERGENIC HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN-73.SNP.12:14673649 chr12:014673649 0 W/14673649-14673649 FN-73 Single Base Substitution C-T INTERGENIC HET SNo: 73, Mutant_ID: FN-73, Generation: M2, Mutations: 60, Genes: 6, Seed availability: Yes. FN-142.SNP.12:14676904 chr12:014676904 0 W/14676904-14676904 FN-142 Single Base Substitution C-A INTERGENIC HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3849-S.SNP.12:14686267 chr12:014686267 0 W/14686267-14686267 FN3849-S SNP C -> A AC=1;AN=158;BQB=0.778795;DP=2489;DP4=1045,1335,12,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.88696e-07;MQSB=0.470521;RPB=0.224118;SGB=55.806;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.12:14687019 chr12:014687019 0 W/14687019-14687019 FN633-S Single Base Substitution T-G INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3426-S.SNP.12:14688152 chr12:014688152 0 W/14688152-14688152 FN3426-S SNP C -> T AC=1;AN=184;BQB=0.654895;DP=2867;DP4=1126,1630,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=41;MQ0F=0.00941751;MQB=0.989317;MQSB=0.00108082;RPB=0.999932;SGB=18.2315;VDB=0.838639;EFF=INTERGENIC(MODIFIER||||||||||1) FN782-S.SNP.12:14689528 chr12:014689528 0 W/14689528-14689528 FN782-S Single Base Substitution G-A INTERGENIC HOMO SNo: 703, Mutant_ID: FN782-S, Generation: M2, Mutations: 55, Genes: 70, Seed availability: Yes. FN-162.SNP.12:14691080 chr12:014691080 0 W/14691080-14691080 FN-162 Single Base Substitution T-A INTERGENIC HOMO SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1262-S.SNP.12:14693223 chr12:014693223 0 W/14693223-14693223 FN1262-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1262-S.SNP.12:14693241 chr12:014693241 0 W/14693241-14693241 FN1262-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN3442-S.SNP.12:14701561 chr12:014701561 0 W/14701561-14701561 FN3442-S SNP G -> A AC=1;AN=184;BQB=0.736871;DP=1873;DP4=806,984,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000627058;MQSB=0.11478;RPB=0.319292;SGB=18.1394;VDB=0.619542;EFF=INTERGENIC(MODIFIER||||||||||1) FN781-S.SNP.12:14702833 chr12:014702833 0 W/14702833-14702833 FN781-S Single Base Substitution G-A INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN1120-S.SNP.12:14706664 chr12:014706664 0 W/14706664-14706664 FN1120-S Single Base Substitution G-C INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN3869-S.SNP.12:14712631 chr12:014712631 0 W/14712631-14712631 FN3869-S SNP G -> C AC=1;AN=158;BQB=0.979508;DP=2303;DP4=1116,1099,8,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.69178e-07;MQSB=0.986154;RPB=0.990137;SGB=55.806;VDB=0.411966;EFF=INTERGENIC(MODIFIER||||||||||1) FN1112-S.SNP.12:14713137 chr12:014713137 0 W/14713137-14713137 FN1112-S Single Base Substitution A-G INTERGENIC HET SNo: 984, Mutant_ID: FN1112-S, Generation: M2, Mutations: 72, Genes: 8, Seed availability: Yes. FN3714-S.SNP.12:14726685 chr12:014726685 0 W/14726685-14726685 FN3714-S SNP T -> C AC=1;AN=190;BQB=0.961744;DP=2889;DP4=1221,1560,7,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.84681e-12;MQSB=0.704499;RPB=0.998011;SGB=99.1879;VDB=0.254826;EFF=INTERGENIC(MODIFIER||||||||||1) FN2370.SNP.12:14728834 chr12:014728834 0 W/14728834-14728834 FN2370 SNP G -> A AC=2;AN=192;BQB=0.000127818;DP=5243;DP4=2309,2480,13,17;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0;MQB=5.26384e-12;MQSB=0.0332789;RPB=0.824694;SGB=62.2505;VDB=0.114849;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.12:14740361 chr12:014740361 0 W/14740361-14740361 FN1263-S Single Base Substitution C-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN4260-S.SNP.12:14741163 chr12:014741163 0 W/14741163-14741163 FN4260-S SNP A -> G AC=1;AN=170;BQB=0.952758;DP=2509;DP4=1160,1268,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.62683e-06;MQSB=0.999978;RPB=0.107815;SGB=43.4296;VDB=0.132303;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.12:14746130 chr12:014746130 0 W/14746130-14746130 FN_543-2-6 Single Base Substitution G-C Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1499-S.SNP.12:14747407 chr12:014747407 0 W/14747407-14747407 FN1499-S Single Base Substitution G-A INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2589-S.SNP.12:14747645 chr12:014747645 0 W/14747645-14747645 FN2589-S SNP A -> G AC=1;AN=198;BQB=0.949644;DP=4370;DP4=1998,2099,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.99025e-08;MQSB=0.798722;RPB=0.791284;SGB=7.75428;VDB=0.171058;EFF=INTERGENIC(MODIFIER||||||||||1) FN680-S.SNP.12:14755805 chr12:014755805 0 W/14755805-14755805 FN680-S Single Base Substitution C-A UTR_3_PRIME HET SNo: 613, Mutant_ID: FN680-S, Generation: M2, Mutations: 60, Genes: 16, Seed availability: Yes. FN2280-S.SNP.12:14761509 chr12:014761509 0 W/14761509-14761509 FN2280-S SNP G -> T AC=2;AN=190;BQB=0.750938;DP=4458;DP4=2176,1922,24,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000224316;MQB=7.20141e-21;MQSB=0.942669;RPB=0.991503;SGB=149.825;VDB=0.0528463;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R266L|268|LOC_Os12g25500|protein_coding|CODING|LOC_Os12g25500.1|5|1) FN3495-S.SNP.12:14761777 chr12:014761777 0 W/14761777-14761777 FN3495-S SNP T -> C AC=1;AN=188;BQB=0.938567;DP=3354;DP4=1547,1656,3,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.18188e-09;MQSB=0.999602;RPB=0.200209;SGB=26.0762;VDB=0.0967864;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.12:14762577 chr12:014762577 0 W/14762577-14762577 FN3839-S SNP C -> T AC=1;AN=190;BQB=0.892471;DP=2882;DP4=1411,1375,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.18091e-08;MQSB=0.994721;RPB=0.400442;SGB=49.0954;VDB=0.0461932;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S1240|1303|LOC_Os12g25510|protein_coding|CODING|LOC_Os12g25510.1|9|1) FN3839-S.SNP.12:14762578 chr12:014762578 0 W/14762578-14762578 FN3839-S SNP G -> T AC=1;AN=190;BQB=0.931143;DP=2886;DP4=1420,1385,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.02898e-08;MQSB=0.996441;RPB=0.495562;SGB=49.0954;VDB=0.0461932;EFF=STOP_GAINED(HIGH|NONSENSE|tCg/tAg|S1240*|1303|LOC_Os12g25510|protein_coding|CODING|LOC_Os12g25510.1|9|1) FN3839-S.SNP.12:14762579 chr12:014762579 0 W/14762579-14762579 FN3839-S SNP A -> T AC=1;AN=190;BQB=0.923619;DP=2875;DP4=1432,1346,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.04115e-08;MQSB=0.964665;RPB=0.529392;SGB=49.0954;VDB=0.0424113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S1240T|1303|LOC_Os12g25510|protein_coding|CODING|LOC_Os12g25510.1|9|1) FN747-S.SNP.12:14762811 chr12:014762811 0 W/14762811-14762811 FN747-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN2428.SNP.12:14765372 chr12:014765372 0 W/14765372-14765372 FN2428 SNP C -> T AC=1;AN=200;BQB=0.728454;DP=3988;DP4=2019,1701,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.92178e-10;MQSB=0.940903;RPB=0.325827;SGB=32.0901;VDB=0.284647;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R469H|1303|LOC_Os12g25510|protein_coding|CODING|LOC_Os12g25510.1|6|1) FN2537-S.SNP.12:14771771 chr12:014771771 0 W/14771771-14771771 FN2537-S SNP T -> A AC=2;AN=188;BQB=0.242689;DP=3999;DP4=1856,1941,16,18;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.2654e-16;MQSB=0.985571;RPB=0.280302;SGB=112.051;VDB=0.608649;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.12:14771961 chr12:014771961 0 W/14771961-14771961 FN2480 SNP A -> G AC=1;AN=200;BQB=0.320353;DP=4519;DP4=2136,2135,4,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.69214e-06;MQSB=0.93392;RPB=0.442537;SGB=35.8441;VDB=0.286826;EFF=INTERGENIC(MODIFIER||||||||||1) FN819-S.SNP.12:14778801 chr12:014778801 0 W/14778801-14778801 FN819-S Single Base Substitution T-C INTERGENIC HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN1281-S.SNP.12:14778988 chr12:014778988 0 W/14778988-14778988 FN1281-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN4247-S.SNP.12:14781949 chr12:014781949 0 W/14781949-14781949 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.996149;DP=2494;DP4=1251,1159,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.71886e-07;MQSB=0.983376;RPB=0.996405;SGB=52.3148;VDB=0.87894;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K261E|725|LOC_Os12g25530|protein_coding|CODING|LOC_Os12g25530.1|3|1) FN821-S.SNP.12:14786386 chr12:014786386 0 W/14786386-14786386 FN821-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g25550 transposon protein, putative, CACTA, En/Spm sub-class SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN821-S.SNP.12:14786387 chr12:014786387 0 W/14786387-14786387 FN821-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN391-S.SNP.12:14794985 chr12:014794985 0 W/14794985-14794985 FN391-S Single Base Substitution C-T INTERGENIC HET SNo: 377, Mutant_ID: FN391-S, Generation: M2, Mutations: 75, Genes: 7, Seed availability: Yes. FN3421-S.SNP.12:14799005 chr12:014799005 0 W/14799005-14799005 FN3421-S SNP G -> T AC=1;AN=184;BQB=0.757249;DP=2836;DP4=1414,1321,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=7.00195e-10;MQSB=0.966674;RPB=0.872088;SGB=62.3078;VDB=0.990376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Tat|D535Y|750|LOC_Os12g25570|protein_coding|CODING|LOC_Os12g25570.1|8|1) FN2213-S.SNP.12:14806126 chr12:014806126 0 W/14806126-14806126 FN2213-S SNP A -> T AC=1;AN=190;BQB=0.95787;DP=5103;DP4=2613,2138,14,8;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0223398;MQB=0.159942;MQSB=0.000305628;RPB=0.672751;SGB=68.0854;VDB=0.762524;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.12:14807717 chr12:014807717 0 W/14807717-14807717 FN4255-S SNP C -> T AC=1;AN=170;BQB=0.646864;DP=2257;DP4=1337,824,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=36;MQ0F=0.0434205;MQB=0.999496;MQSB=5.3199e-05;RPB=0.298181;SGB=61.2001;VDB=0.0985666;EFF=INTERGENIC(MODIFIER||||||||||1) FN3395-S.SNP.12:14812548 chr12:014812548 0 W/14812548-14812548 FN3395-S SNP G -> T AC=1;AN=184;BQB=1;DP=3457;DP4=1581,1788,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0749205;MQB=0.996095;MQSB=8.13176e-08;RPB=0.769521;SGB=62.3078;VDB=0.607298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gAc|A6D|419|LOC_Os12g25590|protein_coding|CODING|LOC_Os12g25590.1|1|1) FN3665-S.SNP.12:14814785 chr12:014814785 0 W/14814785-14814785 FN3665-S SNP G -> A AC=1;AN=190;BQB=0.0148813;DP=2291;DP4=1374,815,13,8;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0157137;MQB=0.0288751;MQSB=0.267351;RPB=0.586695;SGB=90.0802;VDB=0.868229;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.12:14817167 chr12:014817167 0 W/14817167-14817167 FN4052-S SNP T -> A AC=1;AN=168;BQB=0.816715;DP=2405;DP4=1118,1118,6,15;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.130561;MQB=0.834676;MQSB=5.99733e-24;RPB=0.854243;SGB=11.3448;VDB=0.631023;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I442F|478|LOC_Os12g25600|protein_coding|CODING|LOC_Os12g25600.1|2|1) FN2547-S.SNP.12:14823833 chr12:014823833 0 W/14823833-14823833 FN2547-S SNP C -> G AC=1;AN=198;BQB=0.996557;DP=4065;DP4=1968,1904,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.98869e-07;MQSB=0.980461;RPB=0.958669;SGB=2.96892;VDB=0.83284;EFF=INTERGENIC(MODIFIER||||||||||1) FN2549-S.SNP.12:14825428 chr12:014825428 0 W/14825428-14825428 FN2549-S SNP C -> T AC=1;AN=198;BQB=0.0995669;DP=4071;DP4=1956,1830,4,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=0.00208473;MQSB=0.606123;RPB=0.397181;SGB=25.7687;VDB=0.981307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1108-S.SNP.12:14831299 chr12:014831299 0 W/14831299-14831299 FN1108-S Single Base Substitution G-C INTERGENIC HET SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN-332.SNP.12:14836381 chr12:014836381 0 W/14836381-14836381 FN-332 Single Base Substitution C-T INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN536-S.SNP.12:14840859 chr12:014840859 0 W/14840859-14840859 FN536-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g25640 SAP domain containing protein, expressed SNo: 532, Mutant_ID: FN536-S, Generation: M2, Mutations: 56, Genes: 51, Seed availability: Yes. FN926-S.SNP.12:14842048 chr12:014842048 0 W/14842048-14842048 FN926-S Single Base Substitution A-G INTRON HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN1287-S.SNP.12:14850755 chr12:014850755 0 W/14850755-14850755 FN1287-S Single Base Substitution C-A INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN1434-S.SNP.12:14854108 chr12:014854108 0 W/14854108-14854108 FN1434-S Single Base Substitution A-C INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN3383-S.SNP.12:14863837 chr12:014863837 0 W/14863837-14863837 FN3383-S SNP G -> T AC=2;AN=184;BQB=0.0591956;DP=2539;DP4=968,1304,18,17;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0;MQB=9.92128e-09;MQSB=0.00104868;RPB=0.012899;SGB=-5.32182;VDB=0.11492;EFF=INTERGENIC(MODIFIER||||||||||1) FN1453-S.SNP.12:14870079 chr12:014870079 0 W/14870079-14870079 FN1453-S Single Base Substitution A-C UTR_5_PRIME HET SNo: 1223, Mutant_ID: FN1453-S, Generation: M2, Mutations: 75, Genes: 58, Seed availability: Yes. FN4050-S.SNP.12:14878838 chr12:014878838 0 W/14878838-14878838 FN4050-S SNP T -> C AC=1;AN=168;BQB=0.450779;DP=2704;DP4=1259,1229,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54148e-05;MQSB=0.128588;RPB=0.980133;SGB=45.0404;VDB=0.866951;EFF=INTERGENIC(MODIFIER||||||||||1) FN_546-3-1.SNP.12:14879007 chr12:014879007 0 W/14879007-14879007 FN_546-3-1 Single Base Substitution T-C Homo SNo: 1426, Mutant_ID: FN_546-3-1, Generation: M3, Mutations: 65, Genes: 15, Seed availability: Yes. FN3761-S.SNP.12:14882458 chr12:014882458 0 W/14882458-14882458 FN3761-S SNP C -> A AC=1;AN=190;BQB=0.320003;DP=2893;DP4=1358,1401,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.97041e-05;MQSB=0.971468;RPB=0.333669;SGB=1.00337;VDB=0.927008;EFF=INTERGENIC(MODIFIER||||||||||1) FN-186.SNP.12:14882468 chr12:014882468 0 W/14882468-14882468 FN-186 Single Base Substitution T-G INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN2412.SNP.12:14883421 chr12:014883421 0 W/14883421-14883421 FN2412 SNP G -> T AC=1;AN=200;BQB=0.986032;DP=3325;DP4=1708,1424,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.20136e-06;MQSB=0.991197;RPB=0.862292;SGB=36.6644;VDB=0.304231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaG/gaT|E75D|351|LOC_Os12g25680|protein_coding|CODING|LOC_Os12g25680.1|1|1) FN1520-S.SNP.12:14886789 chr12:014886789 0 W/14886789-14886789 FN1520-S Single Base Substitution G-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN2681-S.SNP.12:14890733 chr12:014890733 0 W/14890733-14890733 FN2681-S SNP C -> G AC=1;AN=200;BQB=0.998472;DP=5105;DP4=2388,2384,17,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.35357e-14;MQSB=0.989623;RPB=0.378579;SGB=87.1368;VDB=0.465921;EFF=INTERGENIC(MODIFIER||||||||||1) FN1163-S.SNP.12:14891193 chr12:014891193 0 W/14891193-14891193 FN1163-S Single Base Substitution C-T INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN2388.SNP.12:14897299 chr12:014897299 0 W/14897299-14897299 FN2388 SNP T -> C AC=1;AN=200;BQB=0.770688;DP=4862;DP4=2436,2179,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32567e-11;MQSB=0.980495;RPB=0.210804;SGB=61.9006;VDB=0.187617;EFF=UTR_3_PRIME(MODIFIER||86||510|LOC_Os12g25710|protein_coding|CODING|LOC_Os12g25710.1|13|1),UTR_3_PRIME(MODIFIER||86||510|LOC_Os12g25710|protein_coding|CODING|LOC_Os12g25710.2|13|1),UTR_3_PRIME(MODIFIER||86||510|LOC_Os12g25710|protein_coding|CODING|LOC_Os12g25710.3|12|1),UTR_3_PRIME(MODIFIER||86||489|LOC_Os12g25710|protein_coding|CODING|LOC_Os12g25710.4|14|1) FN2194-S.SNP.12:14911016 chr12:014911016 0 W/14911016-14911016 FN2194-S SNP T -> G AC=1;AN=190;BQB=0.997946;DP=5046;DP4=2397,2247,13,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000396354;MQB=3.67982e-14;MQSB=0.980865;RPB=0.0832217;SGB=92.9626;VDB=0.389505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.12:14913767 chr12:014913767 0 W/14913767-14913767 FN1288-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1423-S.SNP.12:14914206 chr12:014914206 0 W/14914206-14914206 FN1423-S Single Base Substitution C-A INTRON HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN470-S.SNP.12:14916825 chr12:014916825 0 W/14916825-14916825 FN470-S Single Base Substitution T-A INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN407-S.SNP.12:14923370 chr12:014923370 0 W/14923370-14923370 FN407-S Single Base Substitution A-T INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN2230-S.SNP.12:14925114 chr12:014925114 0 W/14925114-14925114 FN2230-S SNP A -> G AC=1;AN=190;BQB=0.699614;DP=5256;DP4=2399,2416,15,19;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000380518;MQB=8.83758e-16;MQSB=0.546938;RPB=0.291593;SGB=-43.4624;VDB=0.364451;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTg/aCg|M495T|932|LOC_Os12g25734|protein_coding|CODING|LOC_Os12g25734.1|4|1) FN3520-S.SNP.12:14926563 chr12:014926563 0 W/14926563-14926563 FN3520-S SNP A -> G AC=1;AN=188;BQB=0.941665;DP=2774;DP4=1446,1167,10,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.05595e-08;MQSB=0.302874;RPB=0.94599;SGB=43.0708;VDB=0.400989;EFF=INTRON(MODIFIER||||932|LOC_Os12g25734|protein_coding|CODING|LOC_Os12g25734.1|2|1) FN2657-S.SNP.12:14928581 chr12:014928581 0 W/14928581-14928581 FN2657-S SNP C -> A AC=1;AN=200;BQB=0.685251;DP=4874;DP4=2482,2099,18,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.7852e-18;MQSB=0.971005;RPB=0.991965;SGB=137.158;VDB=0.196417;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.12:14934727 chr12:014934727 0 W/14934727-14934727 FN-293 Single Base Substitution C-T INTERGENIC HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN702-S.SNP.12:14947532 chr12:014947532 0 W/14947532-14947532 FN702-S Single Base Substitution G-A INTERGENIC HET SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN2660-S.SNP.12:14948404 chr12:014948404 0 W/14948404-14948404 FN2660-S SNP G -> A AC=1;AN=200;BQB=0.991439;DP=5340;DP4=2466,2553,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.83274e-09;MQSB=0.889953;RPB=0.841269;SGB=24.2746;VDB=0.905517;EFF=INTERGENIC(MODIFIER||||||||||1) FN3933-S.SNP.12:14953329 chr12:014953329 0 W/14953329-14953329 FN3933-S SNP C -> G AC=1;AN=158;BQB=0.886374;DP=2493;DP4=1296,1094,10,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.09048e-10;MQSB=0.98577;RPB=0.763294;SGB=86.3921;VDB=0.493461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2428.SNP.12:14953521 chr12:014953521 0 W/14953521-14953521 FN2428 SNP C -> A AC=1;AN=200;BQB=0.998679;DP=4367;DP4=2126,2022,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.01284e-12;MQSB=0.92057;RPB=0.997425;SGB=61.9006;VDB=0.845145;EFF=INTERGENIC(MODIFIER||||||||||1) FN-170.SNP.12:14954085 chr12:014954085 0 W/14954085-14954085 FN-170 Single Base Substitution T-C INTERGENIC HOMO SNo: 170, Mutant_ID: FN-170, Generation: M2, Mutations: 85, Genes: 68, Seed availability: Yes. FN3669-S.SNP.12:14954158 chr12:014954158 0 W/14954158-14954158 FN3669-S SNP G -> T AC=1;AN=190;BQB=0.807868;DP=3099;DP4=1555,1409,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.47175e-06;MQSB=0.947497;RPB=0.78779;SGB=28.9929;VDB=0.721802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2602-S.SNP.12:14956799 chr12:014956799 0 W/14956799-14956799 FN2602-S SNP G -> A AC=1;AN=198;BQB=0.67804;DP=3806;DP4=1916,1724,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.1829e-06;MQSB=0.789548;RPB=0.374532;SGB=49.5489;VDB=0.0455447;EFF=INTERGENIC(MODIFIER||||||||||1) FN3515-S.SNP.12:14960326 chr12:014960326 0 W/14960326-14960326 FN3515-S SNP G -> T AC=1;AN=188;BQB=1;DP=2558;DP4=1198,1263,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00039093;MQB=9.61916e-07;MQSB=0.548816;RPB=0.714995;SGB=58.0655;VDB=0.131699;EFF=INTERGENIC(MODIFIER||||||||||1) FN3610-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN3610-S SNP G -> A AC=1;AN=190;BQB=0.998163;DP=2745;DP4=1212,1432,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=5.67232e-09;MQSB=0.122092;RPB=0.539332;SGB=80.9724;VDB=0.515054;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN4184-S SNP G -> A AC=2;AN=170;BQB=0.956335;DP=2545;DP4=1234,1222,11,12;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.47623e-09;MQSB=0.0611775;RPB=0.596546;SGB=96.7413;VDB=0.862065;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN480-S Single Base Substitution G-A INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN540-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN540-S Single Base Substitution G-A INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN620-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN620-S Single Base Substitution G-A INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN739-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN739-S Single Base Substitution G-A INTERGENIC HET SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN988-S.SNP.12:14970991 chr12:014970991 0 W/14970991-14970991 FN988-S Single Base Substitution G-A INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN2724-S.SNP.12:14972853 chr12:014972853 0 W/14972853-14972853 FN2724-S SNP G -> A AC=1;AN=200;BQB=0.995588;DP=4233;DP4=2170,1845,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30984e-08;MQSB=0.347513;RPB=0.951386;SGB=63.4749;VDB=0.0640744;EFF=INTERGENIC(MODIFIER||||||||||1) FN4128-S.SNP.12:14978162 chr12:014978162 0 W/14978162-14978162 FN4128-S SNP C -> T AC=1;AN=182;BQB=0.886362;DP=3064;DP4=1434,1514,5,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.28156e-09;MQSB=0.986978;RPB=0.96424;SGB=57.644;VDB=0.927913;EFF=INTERGENIC(MODIFIER||||||||||1) FN1094-S.SNP.12:14980045 chr12:014980045 0 W/14980045-14980045 FN1094-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed SNo: 972, Mutant_ID: FN1094-S, Generation: M2, Mutations: 93, Genes: 23, Seed availability: Yes. FN1568-S.SNP.12:14980045 chr12:014980045 0 W/14980045-14980045 FN1568-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed SNo: 1308, Mutant_ID: FN1568-S, Generation: M2, Mutations: 76, Genes: 11, Seed availability: No. FN242-S.SNP.12:14980045 chr12:014980045 0 W/14980045-14980045 FN242-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN3356-S.SNP.12:14980045 chr12:014980045 0 W/14980045-14980045 FN3356-S SNP C -> T AC=1;AN=184;BQB=0.996957;DP=3114;DP4=1451,1536,4,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.95987e-08;MQSB=0.857676;RPB=0.969316;SGB=39.2697;VDB=0.0810481;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gga/Aga|G1468R|1715|LOC_Os12g25830|protein_coding|CODING|LOC_Os12g25830.1|9|1) FN2689-S.SNP.12:14980768 chr12:014980768 0 W/14980768-14980768 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.211527;DP=4863;DP4=2145,2454,12,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.6923e-13;MQSB=0.999423;RPB=0.0656301;SGB=58.1418;VDB=0.659374;EFF=STOP_GAINED(HIGH|NONSENSE|Caa/Taa|Q1252*|1715|LOC_Os12g25830|protein_coding|CODING|LOC_Os12g25830.1|8|1);LOF=(LOC_Os12g25830|LOC_Os12g25830|1|1.00);NMD=(LOC_Os12g25830|LOC_Os12g25830|1|1.00) FN1481-S.SNP.12:14984577 chr12:014984577 0 W/14984577-14984577 FN1481-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3530-S.SNP.12:14985730 chr12:014985730 0 W/14985730-14985730 FN3530-S SNP T -> C AC=1;AN=188;BQB=0.96177;DP=2515;DP4=1287,1062,11,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.45867e-11;MQSB=0.796681;RPB=0.988515;SGB=36.2493;VDB=0.720699;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H41R|1715|LOC_Os12g25830|protein_coding|CODING|LOC_Os12g25830.1|1|1) FN3982-S.SNP.12:14986480 chr12:014986480 0 W/14986480-14986480 FN3982-S SNP A -> G AC=1;AN=168;BQB=0.994871;DP=2385;DP4=1133,1130,8,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.25463e-07;MQSB=0.771243;RPB=0.993196;SGB=24.6155;VDB=0.247698;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.12:14987782 chr12:014987782 0 W/14987782-14987782 FN2755-S SNP G -> A AC=1;AN=200;BQB=0.816373;DP=4592;DP4=2264,2126,11,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.39814e-13;MQSB=0.867955;RPB=0.975463;SGB=87.1368;VDB=0.935369;EFF=INTERGENIC(MODIFIER||||||||||1) FN_826-4-1.SNP.12:14993100 chr12:014993100 0 W/14993100-14993100 FN_826-4-1 Single Base Substitution C-A HET SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. FN4037-S.SNP.12:14995603 chr12:014995603 0 W/14995603-14995603 FN4037-S SNP C -> T AC=1;AN=168;BQB=0.953902;DP=2814;DP4=1424,1294,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.01011e-06;MQSB=0.963233;RPB=0.485965;SGB=34.4498;VDB=0.349492;EFF=INTRON(MODIFIER||||513|LOC_Os12g25850|protein_coding|CODING|LOC_Os12g25850.1|4|1) FN815-S.SNP.12:14998477 chr12:014998477 0 W/14998477-14998477 FN815-S Single Base Substitution G-A STOP_GAINED HOMO LOC_Os12g25850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1426-S.SNP.12:14999902 chr12:014999902 0 W/14999902-14999902 FN1426-S Single Base Substitution G-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN3723-S.SNP.12:15000199 chr12:015000199 0 W/15000199-15000199 FN3723-S SNP T -> A AC=1;AN=190;BQB=0.935029;DP=2783;DP4=1406,1167,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0172476;MQB=0.0286733;MQSB=0.663695;RPB=0.988373;SGB=32.5467;VDB=0.504569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.12:15000691 chr12:015000691 0 W/15000691-15000691 FN1460-S Single Base Substitution A-G INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2589-S.SNP.12:15004060 chr12:015004060 0 W/15004060-15004060 FN2589-S SNP T -> A AC=1;AN=186;BQB=0.461726;DP=4221;DP4=2123,1934,7,10;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=8.38352e-11;MQSB=0.972067;RPB=0.896218;SGB=50.9344;VDB=0.506803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.12:15004780 chr12:015004780 0 W/15004780-15004780 FN2591-S SNP G -> A AC=1;AN=188;BQB=0.987216;DP=3750;DP4=1781,1752,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.64522e-05;MQSB=0.964913;RPB=0.516515;SGB=35.7638;VDB=0.416561;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.12:15009034 chr12:015009034 0 W/15009034-15009034 FN670-S Single Base Substitution G-C INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2146-S.SNP.12:15012932 chr12:015012932 0 W/15012932-15012932 FN2146-S SNP A -> G AC=1;AN=168;BQB=0.0244406;DP=3680;DP4=1950,1688,11,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.556e-05;MQSB=0.99976;RPB=0.429646;SGB=-240.186;VDB=0.0989763;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.12:15015487 chr12:015015487 0 W/15015487-15015487 FN670-S Single Base Substitution C-T INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN948-S.SNP.12:15016180 chr12:015016180 0 W/15016180-15016180 FN948-S Single Base Substitution C-T INTERGENIC HET SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN_1017-1.SNP.12:15041970 chr12:015041970 0 W/15041970-15041970 FN_1017-1 Single Base Substitution G-T Homo SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN1152-S.SNP.12:15042153 chr12:015042153 0 W/15042153-15042153 FN1152-S Single Base Substitution G-A INTERGENIC HET SNo: 1008, Mutant_ID: FN1152-S, Generation: M2, Mutations: 104, Genes: 60, Seed availability: Yes. FN990-S.SNP.12:15042392 chr12:015042392 0 W/15042392-15042392 FN990-S Single Base Substitution A-G INTERGENIC HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN2660-S.SNP.12:15043437 chr12:015043437 0 W/15043437-15043437 FN2660-S SNP C -> G AC=1;AN=200;BQB=0.379076;DP=4891;DP4=2241,2385,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000204457;MQB=2.78233e-12;MQSB=0.930052;RPB=0.967909;SGB=72.7161;VDB=0.221871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2582-S.SNP.12:15044630 chr12:015044630 0 W/15044630-15044630 FN2582-S SNP C -> A AC=1;AN=198;BQB=0.91205;DP=4330;DP4=2250,1858,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=2.14243e-05;MQSB=0.779427;RPB=0.691301;SGB=16.3688;VDB=0.71014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3365-S.SNP.12:15046311 chr12:015046311 0 W/15046311-15046311 FN3365-S SNP A -> T AC=1;AN=184;BQB=0.999821;DP=2856;DP4=1234,1500,7,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.87014e-09;MQSB=0.829353;RPB=0.927666;SGB=60.4004;VDB=0.261798;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.12:15046857 chr12:015046857 0 W/15046857-15046857 FN4139-S SNP A -> T AC=1;AN=170;BQB=0.934584;DP=2173;DP4=1210,891,6,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.71014e-10;MQSB=0.929357;RPB=0.0909316;SGB=65.6427;VDB=0.445951;EFF=INTERGENIC(MODIFIER||||||||||1) FN4260-S.SNP.12:15059890 chr12:015059890 0 W/15059890-15059890 FN4260-S SNP G -> A AC=1;AN=170;BQB=0.999848;DP=2685;DP4=1203,1377,11,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.93329e-14;MQSB=0.906286;RPB=0.979604;SGB=69.3045;VDB=0.0411684;EFF=INTRON(MODIFIER||||904|LOC_Os12g25940|protein_coding|CODING|LOC_Os12g25940.1|7|1) FN4260-S.SNP.12:15059891 chr12:015059891 0 W/15059891-15059891 FN4260-S SNP C -> A AC=1;AN=170;BQB=0.526359;DP=2669;DP4=1202,1386,12,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.89957e-13;MQSB=0.90901;RPB=0.836063;SGB=69.3045;VDB=0.116898;EFF=INTRON(MODIFIER||||904|LOC_Os12g25940|protein_coding|CODING|LOC_Os12g25940.1|7|1) FN722-S.SNP.12:15062485 chr12:015062485 0 W/15062485-15062485 FN722-S Single Base Substitution C-G INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN771-S.SNP.12:15067083 chr12:015067083 0 W/15067083-15067083 FN771-S Single Base Substitution G-A INTERGENIC HET SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN734-S.SNP.12:15067587 chr12:015067587 0 W/15067587-15067587 FN734-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g25950 expressed protein SNo: 659, Mutant_ID: FN734-S, Generation: M2, Mutations: 68, Genes: 36, Seed availability: Yes. FN-205.SNP.12:15068399 chr12:015068399 0 W/15068399-15068399 FN-205 Single Base Substitution G-C INTERGENIC HET SNo: 205, Mutant_ID: FN-205, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN3543-S.SNP.12:15071160 chr12:015071160 0 W/15071160-15071160 FN3543-S SNP G -> A AC=1;AN=188;BQB=0.919508;DP=4367;DP4=2296,2018,5,7;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.182047;MQB=0.257646;MQSB=2.31054e-16;RPB=0.351112;SGB=32.441;VDB=0.680673;EFF=INTRON(MODIFIER||||558|LOC_Os12g25959|protein_coding|CODING|LOC_Os12g25959.1|3|1) FN2403.SNP.12:15072107 chr12:015072107 0 W/15072107-15072107 FN2403 SNP C -> T AC=1;AN=200;BQB=0.922878;DP=3504;DP4=1800,1447,8,4;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.143836;MQB=0.490741;MQSB=3.58298e-13;RPB=0.874074;SGB=33.0593;VDB=0.572699;EFF=INTRON(MODIFIER||||558|LOC_Os12g25959|protein_coding|CODING|LOC_Os12g25959.1|3|1) FN3371-S.SNP.12:15074786 chr12:015074786 0 W/15074786-15074786 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.563988;DP=3428;DP4=1548,1630,17,4;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.000875146;MQB=8.46645e-07;MQSB=0.0338479;RPB=0.264362;SGB=-38.1432;VDB=0.43359;EFF=UTR_3_PRIME(MODIFIER||92||32|LOC_Os12g25968|protein_coding|CODING|LOC_Os12g25968.1|1|1) FN1423-S.SNP.12:15075812 chr12:015075812 0 W/15075812-15075812 FN1423-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3879-S.SNP.12:15076764 chr12:015076764 0 W/15076764-15076764 FN3879-S SNP T -> A AC=1;AN=158;BQB=0.995496;DP=2469;DP4=1232,1104,8,14;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.00850547;MQB=1.46486e-07;MQSB=6.11599e-08;RPB=0.718688;SGB=64.3985;VDB=0.781586;EFF=INTRON(MODIFIER||||1541|LOC_Os12g25980|protein_coding|CODING|LOC_Os12g25980.1|1|1) FN3811-S.SNP.12:15077756 chr12:015077756 0 W/15077756-15077756 FN3811-S SNP C -> G AC=1;AN=190;BQB=0.934292;DP=2883;DP4=1597,1197,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.0079778;MQB=0.0100714;MQSB=0.093106;RPB=0.973899;SGB=62.7569;VDB=0.182674;EFF=INTRON(MODIFIER||||1541|LOC_Os12g25980|protein_coding|CODING|LOC_Os12g25980.1|2|1) FN-277.SNP.12:15080919 chr12:015080919 0 W/15080919-15080919 FN-277 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g25980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN549-S.SNP.12:15082523 chr12:015082523 0 W/15082523-15082523 FN549-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 544, Mutant_ID: FN549-S, Generation: M2, Mutations: 59, Genes: 15, Seed availability: Yes. FN698-S.SNP.12:15083047 chr12:015083047 0 W/15083047-15083047 FN698-S Single Base Substitution G-C INTERGENIC HET SNo: 628, Mutant_ID: FN698-S, Generation: M2, Mutations: 42, Genes: 13, Seed availability: Yes. FN2637-S.SNP.12:15083607 chr12:015083607 0 W/15083607-15083607 FN2637-S SNP G -> A AC=1;AN=200;BQB=0.989342;DP=4056;DP4=1711,1983,8,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0204635;MQB=1.62991e-05;MQSB=3.62322e-22;RPB=0.481737;SGB=77.2904;VDB=0.32086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2637-S.SNP.12:15083608 chr12:015083608 0 W/15083608-15083608 FN2637-S SNP C -> A AC=1;AN=200;BQB=0.783332;DP=4060;DP4=1831,1965,7,10;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0219212;MQB=2.8666e-05;MQSB=4.65061e-19;RPB=0.554804;SGB=72.6852;VDB=0.433477;EFF=INTERGENIC(MODIFIER||||||||||1) FN4044-S.SNP.12:15089061 chr12:015089061 0 W/15089061-15089061 FN4044-S SNP G -> T AC=1;AN=168;BQB=0.961971;DP=3032;DP4=1311,1620,4,11;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.00230871;MQB=0.000267248;MQSB=0.942533;RPB=0.968936;SGB=61.0344;VDB=0.986173;EFF=INTERGENIC(MODIFIER||||||||||1) FN4046-S.SNP.12:15089995 chr12:015089995 0 W/15089995-15089995 FN4046-S SNP G -> T AC=1;AN=168;BQB=0.822488;DP=2653;DP4=1121,1411,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0.0011308;MQB=6.59524e-05;MQSB=0.000242104;RPB=0.250881;SGB=47.7421;VDB=0.759713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.12:15098290 chr12:015098290 0 W/15098290-15098290 FN1737-S SNP C -> T AC=1;AN=188;BQB=0.47198;DP=1694;DP4=584,1051,4,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000257249;MQSB=0.767374;RPB=0.986809;SGB=-17.1729;VDB=0.248535;EFF=INTERGENIC(MODIFIER||||||||||1) FN461-S.SNP.12:15099880 chr12:015099880 0 W/15099880-15099880 FN461-S Single Base Substitution C-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN461-S.SNP.12:15099881 chr12:015099881 0 W/15099881-15099881 FN461-S Single Base Substitution A-C INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN2218-S.SNP.12:15102254 chr12:015102254 0 W/15102254-15102254 FN2218-S SNP C -> T AC=1;AN=190;BQB=0.724299;DP=4900;DP4=2285,2235,17,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000204082;MQB=1.11212e-17;MQSB=0.904602;RPB=0.774945;SGB=103.624;VDB=0.131047;EFF=INTERGENIC(MODIFIER||||||||||1) FN4025-S.SNP.12:15102423 chr12:015102423 0 W/15102423-15102423 FN4025-S SNP G -> A AC=1;AN=168;BQB=0.890002;DP=2697;DP4=1445,1124,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.92525e-06;MQSB=0.128845;RPB=0.999335;SGB=19.7539;VDB=0.599744;EFF=INTERGENIC(MODIFIER||||||||||1) FN421-S.SNP.12:15102849 chr12:015102849 0 W/15102849-15102849 FN421-S Single Base Substitution A-G INTERGENIC HET SNo: 420, Mutant_ID: FN421-S, Generation: M2, Mutations: 59, Genes: 30, Seed availability: Yes. FN1050-S.SNP.12:15109166 chr12:015109166 0 W/15109166-15109166 FN1050-S Single Base Substitution C-G INTERGENIC HET SNo: 944, Mutant_ID: FN1050-S, Generation: M2, Mutations: 61, Genes: 70, Seed availability: Yes. FN2653-S.SNP.12:15110007 chr12:015110007 0 W/15110007-15110007 FN2653-S SNP G -> T AC=1;AN=200;BQB=0.99806;DP=5288;DP4=2450,2540,14,11;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.159228;MQB=0.998826;MQSB=0;RPB=0.979933;SGB=109.527;VDB=0.382488;EFF=INTERGENIC(MODIFIER||||||||||1) FN739-S.SNP.12:15111814 chr12:015111814 0 W/15111814-15111814 FN739-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g26010 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 664, Mutant_ID: FN739-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. FN2311.SNP.12:15113869 chr12:015113869 0 W/15113869-15113869 FN2311 SNP G -> A AC=2;AN=192;BQB=0.65226;DP=4727;DP4=2378,1932,25,23;HOB=0.0206163;ICB=0.494846;MQ=48;MQ0F=0.010366;MQB=9.32094e-22;MQSB=0.000133776;RPB=0.470209;SGB=160.968;VDB=0.463941;EFF=INTERGENIC(MODIFIER||||||||||1) FN2311.SNP.12:15113870 chr12:015113870 0 W/15113870-15113870 FN2311 SNP G -> A AC=2;AN=192;BQB=0.732402;DP=4722;DP4=2362,1890,25,23;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0.0108005;MQB=1.6812e-22;MQSB=0.000127594;RPB=0.293964;SGB=160.968;VDB=0.479259;EFF=INTERGENIC(MODIFIER||||||||||1) FN-305.SNP.12:15113878 chr12:015113878 0 W/15113878-15113878 FN-305 Single Base Substitution G-A INTERGENIC HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN681-S.SNP.12:15118360 chr12:015118360 0 W/15118360-15118360 FN681-S Single Base Substitution C-T INTERGENIC HET SNo: 614, Mutant_ID: FN681-S, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN768-S.SNP.12:15130520 chr12:015130520 0 W/15130520-15130520 FN768-S Single Base Substitution C-T INTERGENIC HOMO SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN813-S.SNP.12:15132237 chr12:015132237 0 W/15132237-15132237 FN813-S Single Base Substitution T-G INTRON HOMO SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN1030-S.SNP.12:15133123 chr12:015133123 0 W/15133123-15133123 FN1030-S Single Base Substitution G-C INTERGENIC HET SNo: 926, Mutant_ID: FN1030-S, Generation: M2, Mutations: 71, Genes: 31, Seed availability: Yes. FN476-S.SNP.12:15134199 chr12:015134199 0 W/15134199-15134199 FN476-S Single Base Substitution T-C INTERGENIC HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN1295-S.SNP.12:15135968 chr12:015135968 0 W/15135968-15135968 FN1295-S Single Base Substitution T-A INTRON HOMO SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN2655-S.SNP.12:15136247 chr12:015136247 0 W/15136247-15136247 FN2655-S SNP T -> C AC=1;AN=200;BQB=0.93119;DP=4751;DP4=2401,2096,13,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.95636e-15;MQSB=0.999903;RPB=0.906366;SGB=114.132;VDB=0.654039;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tca/Cca|S276P|469|LOC_Os12g26060|protein_coding|CODING|LOC_Os12g26060.1|4|1) FN4230-S.SNP.12:15155507 chr12:015155507 0 W/15155507-15155507 FN4230-S SNP G -> A AC=1;AN=170;BQB=0.972717;DP=2217;DP4=1256,876,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.26276e-08;MQSB=0.457866;RPB=0.998907;SGB=31.4354;VDB=0.25715;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.12:15155559 chr12:015155559 0 W/15155559-15155559 FN2268-S SNP T -> C AC=1;AN=190;BQB=0.999604;DP=4775;DP4=2390,1968,17,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.11297e-12;MQSB=0.306352;RPB=0.708806;SGB=46.6446;VDB=0.339821;EFF=INTERGENIC(MODIFIER||||||||||1) FN989-S.SNP.12:15156875 chr12:015156875 0 W/15156875-15156875 FN989-S Single Base Substitution G-A INTERGENIC HET SNo: 893, Mutant_ID: FN989-S, Generation: M2, Mutations: 70, Genes: 14, Seed availability: Yes. FN1456-S.SNP.12:15158240 chr12:015158240 0 W/15158240-15158240 FN1456-S Single Base Substitution T-A INTERGENIC HET SNo: 1225, Mutant_ID: FN1456-S, Generation: M2, Mutations: 87, Genes: 11, Seed availability: Yes. FN-332.SNP.12:15158304 chr12:015158304 0 W/15158304-15158304 FN-332 Single Base Substitution C-A INTERGENIC HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN1412-S.SNP.12:15168109 chr12:015168109 0 W/15168109-15168109 FN1412-S Single Base Substitution G-A INTERGENIC HET SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN-75.SNP.12:15172477 chr12:015172477 0 W/15172477-15172477 FN-75 Single Base Substitution C-T INTERGENIC HET SNo: 75, Mutant_ID: FN-75, Generation: M2, Mutations: 40, Genes: 8, Seed availability: Yes. FN2682-S.SNP.12:15173894 chr12:015173894 0 W/15173894-15173894 FN2682-S SNP A -> G AC=1;AN=200;BQB=0.173311;DP=4932;DP4=2435,2296,5,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.7249e-08;MQSB=0.993292;RPB=0.945097;SGB=-34.1311;VDB=0.669416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2305.SNP.12:15180231 chr12:015180231 0 W/15180231-15180231 FN2305 SNP G -> T AC=1;AN=192;BQB=0.978173;DP=4848;DP4=2304,2290,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.87298e-09;MQSB=0.997849;RPB=0.999981;SGB=31.4783;VDB=0.349544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2327.SNP.12:15184032 chr12:015184032 0 W/15184032-15184032 FN2327 SNP C -> T AC=1;AN=192;BQB=0.389973;DP=4630;DP4=2434,1991,19,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.44269e-15;MQSB=0.162642;RPB=0.626773;SGB=122.24;VDB=0.149077;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R27|89|LOC_Os12g26100|protein_coding|CODING|LOC_Os12g26100.1|1|1) FN3727-S.SNP.12:15186702 chr12:015186702 0 W/15186702-15186702 FN3727-S SNP T -> A AC=2;AN=190;BQB=0.966281;DP=2685;DP4=1335,1214,12,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=6.28597e-11;MQSB=0.667993;RPB=0.850534;SGB=90.0802;VDB=0.539452;EFF=INTERGENIC(MODIFIER||||||||||1) FN2544-S.SNP.12:15202784 chr12:015202784 0 W/15202784-15202784 FN2544-S SNP G -> T AC=2;AN=198;BQB=0.87481;DP=4282;DP4=2153,1928,23,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.65363e-21;MQSB=0.999782;RPB=0.957609;SGB=187.402;VDB=0.0564225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3701-S.SNP.12:15203630 chr12:015203630 0 W/15203630-15203630 FN3701-S SNP T -> C AC=1;AN=190;BQB=0.391722;DP=2801;DP4=1173,1543,2,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.80729e-05;MQSB=0.999629;RPB=0.998568;SGB=28.9929;VDB=0.218041;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.12:15204108 chr12:015204108 0 W/15204108-15204108 FN2109-S SNP C -> G AC=1;AN=168;BQB=0.999939;DP=4147;DP4=1935,2163,14,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.84202e-15;MQSB=0.999991;RPB=0.443208;SGB=18.4989;VDB=0.128795;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.12:15204112 chr12:015204112 0 W/15204112-15204112 FN2109-S SNP C -> A AC=1;AN=168;BQB=0.995121;DP=4160;DP4=1959,2149,15,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.43986e-15;MQSB=0.998377;RPB=0.704549;SGB=-11.4952;VDB=0.151131;EFF=INTERGENIC(MODIFIER||||||||||1) FN2109-S.SNP.12:15204113 chr12:015204113 0 W/15204113-15204113 FN2109-S SNP G -> T AC=1;AN=168;BQB=0.936876;DP=4191;DP4=1998,2138,18,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.32155e-14;MQSB=0.998888;RPB=0.980152;SGB=-43.4892;VDB=0.0672358;EFF=INTERGENIC(MODIFIER||||||||||1) FN431-S.SNP.12:15214231 chr12:015214231 0 W/15214231-15214231 FN431-S Single Base Substitution G-A INTERGENIC HOMO SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN3564-S.SNP.12:15215327 chr12:015215327 0 W/15215327-15215327 FN3564-S SNP A -> G AC=1;AN=188;BQB=0.905715;DP=2330;DP4=1211,1022,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.000429185;MQB=0.215563;MQSB=0.00206956;RPB=0.995455;SGB=20.9896;VDB=0.555212;EFF=INTERGENIC(MODIFIER||||||||||1) FN-407.SNP.12:15217496 chr12:015217496 0 W/15217496-15217496 FN-407 Single Base Substitution C-G INTERGENIC HET SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.12:15217496 chr12:015217496 0 W/15217496-15217496 FN407-S Single Base Substitution C-G INTERGENIC HET SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN654-S.SNP.12:15220157 chr12:015220157 0 W/15220157-15220157 FN654-S Single Base Substitution T-A INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1190-S.SNP.12:15223532 chr12:015223532 0 W/15223532-15223532 FN1190-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed SNo: 1025, Mutant_ID: FN1190-S, Generation: M2, Mutations: 61, Genes: 143, Seed availability: Yes. FN1411-S.SNP.12:15225477 chr12:015225477 0 W/15225477-15225477 FN1411-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed SNo: 1188, Mutant_ID: FN1411-S, Generation: M2, Mutations: 51, Genes: 31, Seed availability: Yes. FN1735-S.SNP.12:15225537 chr12:015225537 0 W/15225537-15225537 FN1735-S SNP C -> T AC=1;AN=188;BQB=0.982505;DP=5112;DP4=3427,1624,28,19;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0191706;MQB=5.13822e-05;MQSB=0;RPB=0.527176;SGB=-49.6956;VDB=0.52457;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L578F|1452|LOC_Os12g26140|protein_coding|CODING|LOC_Os12g26140.1|3|1) W247-2-1.SNP.12:15225739 chr12:015225739 0 W/15225739-15225739 W247-2-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN784-S.SNP.12:15228768 chr12:015228768 0 W/15228768-15228768 FN784-S Single Base Substitution G-A INTERGENIC HOMO SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3411-S.SNP.12:15230692 chr12:015230692 0 W/15230692-15230692 FN3411-S SNP C -> A AC=1;AN=184;BQB=0.997661;DP=2632;DP4=1393,1121,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00341945;MQB=4.13147e-05;MQSB=0.3073;RPB=0.418569;SGB=48.7425;VDB=0.759713;EFF=INTERGENIC(MODIFIER||||||||||1) FN863-S.SNP.12:15235441 chr12:015235441 0 W/15235441-15235441 FN863-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os12g26150 retrotransposon protein, putative, unclassified, expressed SNo: 769, Mutant_ID: FN863-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN2163-S.SNP.12:15244142 chr12:015244142 0 W/15244142-15244142 FN2163-S SNP A -> G AC=2;AN=168;BQB=0.161134;DP=3054;DP4=1165,1841,8,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=8.08411e-13;MQSB=0.715622;RPB=0.683877;SGB=-44.0584;VDB=0.558826;EFF=INTRON(MODIFIER||||75|LOC_Os12g26160|protein_coding|CODING|LOC_Os12g26160.1|1|1) FN4001-S.SNP.12:15249413 chr12:015249413 0 W/15249413-15249413 FN4001-S SNP G -> A AC=1;AN=168;BQB=0.826268;DP=2580;DP4=1242,1259,9,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.27086e-10;MQSB=0.993227;RPB=0.872758;SGB=22.1847;VDB=0.958754;EFF=INTERGENIC(MODIFIER||||||||||1) FN2194-S.SNP.12:15258916 chr12:015258916 0 W/15258916-15258916 FN2194-S SNP C -> A AC=1;AN=190;BQB=0.961657;DP=4748;DP4=2056,2306,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.25635e-13;MQSB=0.972987;RPB=0.809257;SGB=85.8548;VDB=0.878374;EFF=INTERGENIC(MODIFIER||||||||||1) FN-104.SNP.12:15272023 chr12:015272023 0 W/15272023-15272023 FN-104 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN2542-S.SNP.12:15274547 chr12:015274547 0 W/15274547-15274547 FN2542-S SNP C -> T AC=1;AN=196;BQB=0.575198;DP=3362;DP4=1730,1401,5,8;HOB=5.20616e-05;ICB=0.000104654;MQ=49;MQ0F=0.000892326;MQB=2.47111e-08;MQSB=0.99499;RPB=0.916842;SGB=36.5539;VDB=0.117091;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.12:15276021 chr12:015276021 0 W/15276021-15276021 FN722-S Single Base Substitution G-C INTRON HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2325.SNP.12:15276256 chr12:015276256 0 W/15276256-15276256 FN2325 SNP C -> A AC=1;AN=192;BQB=0.641416;DP=4500;DP4=1979,2141,7,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.26359e-10;MQSB=0.999535;RPB=0.919227;SGB=72.0322;VDB=0.725376;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A1141S|1280|LOC_Os12g26204|protein_coding|CODING|LOC_Os12g26204.1|11|1) FN-237.SNP.12:15276846 chr12:015276846 0 W/15276846-15276846 FN-237 Single Base Substitution G-A INTRON HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN3825-S.SNP.12:15277318 chr12:015277318 0 W/15277318-15277318 FN3825-S SNP G -> A AC=1;AN=190;BQB=0.898908;DP=2812;DP4=1192,1536,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.00533428;MQB=0.983237;MQSB=0.426573;RPB=0.335057;SGB=50.3161;VDB=0.791477;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N1005|1280|LOC_Os12g26204|protein_coding|CODING|LOC_Os12g26204.1|8|1) FN2478.SNP.12:15281474 chr12:015281474 0 W/15281474-15281474 FN2478 SNP A -> G AC=2;AN=200;BQB=0.931164;DP=3874;DP4=1654,1915,16,14;HOB=0.0198;ICB=0.495051;MQ=38;MQ0F=0.0299432;MQB=0.937956;MQSB=0.201483;RPB=0.438542;SGB=63.3521;VDB=0.16666;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D93|1280|LOC_Os12g26204|protein_coding|CODING|LOC_Os12g26204.1|1|1) FN2328.SNP.12:15283854 chr12:015283854 0 W/15283854-15283854 FN2328 SNP T -> C AC=1;AN=192;BQB=0.942602;DP=4806;DP4=2165,2316,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.92098e-08;MQSB=0.724715;RPB=0.118847;SGB=28.9139;VDB=0.334198;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.12:15286513 chr12:015286513 0 W/15286513-15286513 FN3687-S SNP A -> G AC=2;AN=190;BQB=0.982239;DP=2373;DP4=1213,1070,9,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.89793e-14;MQSB=0.763145;RPB=0.309806;SGB=99.1879;VDB=0.0616642;EFF=INTERGENIC(MODIFIER||||||||||1) FN2120-S.SNP.12:15289846 chr12:015289846 0 W/15289846-15289846 FN2120-S SNP T -> C AC=1;AN=168;BQB=0.988133;DP=3673;DP4=2029,1601,16,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.73847e-12;MQSB=0.916699;RPB=0.882295;SGB=46.4929;VDB=0.328736;EFF=INTERGENIC(MODIFIER||||||||||1) FN1060-S.SNP.12:15290807 chr12:015290807 0 W/15290807-15290807 FN1060-S Single Base Substitution C-T INTERGENIC HOMO SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN895-S.SNP.12:15298499 chr12:015298499 0 W/15298499-15298499 FN895-S Single Base Substitution C-A INTERGENIC HOMO SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2155-S.SNP.12:15299100 chr12:015299100 0 W/15299100-15299100 FN2155-S SNP G -> A AC=1;AN=168;BQB=0.953743;DP=1705;DP4=825,805,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=27;MQ0F=0.146041;MQB=0.651739;MQSB=1.49604e-05;RPB=0.583179;SGB=24.4556;VDB=0.627244;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D1027|1040|LOC_Os12g26250|protein_coding|CODING|LOC_Os12g26250.1|2|1) FN1572-S.SNP.12:15304766 chr12:015304766 0 W/15304766-15304766 FN1572-S Single Base Substitution G-A INTERGENIC Homo SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN3525-S.SNP.12:15313051 chr12:015313051 0 W/15313051-15313051 FN3525-S SNP G -> A AC=1;AN=188;BQB=0.967801;DP=2714;DP4=1289,1378,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00073692;MQB=6.05101e-08;MQSB=1;RPB=0.678994;SGB=48.979;VDB=0.338575;EFF=INTERGENIC(MODIFIER||||||||||1) FN3698-S.SNP.12:15316816 chr12:015316816 0 W/15316816-15316816 FN3698-S SNP A -> G AC=1;AN=190;BQB=0.976465;DP=1485;DP4=684,741,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=0.000121524;MQSB=0.739825;RPB=0.97489;SGB=39.9877;VDB=0.0028438;EFF=INTERGENIC(MODIFIER||||||||||1) FN2239-S.SNP.12:15318386 chr12:015318386 0 W/15318386-15318386 FN2239-S SNP T -> C AC=1;AN=190;BQB=0.977755;DP=5032;DP4=2336,2323,11,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.89202e-09;MQSB=0.999955;RPB=0.842041;SGB=50.3161;VDB=0.688836;EFF=INTERGENIC(MODIFIER||||||||||1) FN883-S.SNP.12:15323127 chr12:015323127 0 W/15323127-15323127 FN883-S Single Base Substitution G-A INTERGENIC HET SNo: 789, Mutant_ID: FN883-S, Generation: M2, Mutations: 76, Genes: 15, Seed availability: Yes. FN4279-S.SNP.12:15323772 chr12:015323772 0 W/15323772-15323772 FN4279-S SNP C -> G AC=2;AN=170;BQB=0.96007;DP=1943;DP4=772,1106,7,13;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.26302e-11;MQSB=0.952733;RPB=0.787209;SGB=58.9766;VDB=0.983464;EFF=INTERGENIC(MODIFIER||||||||||1) FN2771-S.SNP.12:15327672 chr12:015327672 0 W/15327672-15327672 FN2771-S SNP T -> C AC=1;AN=198;BQB=0.256175;DP=4504;DP4=1970,2311,7,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.70457e-09;MQSB=0.97002;RPB=0.884304;SGB=18.9201;VDB=0.846722;EFF=INTRON(MODIFIER||||200|LOC_Os12g26280|protein_coding|CODING|LOC_Os12g26280.1|1|1) FN2212-S.SNP.12:15327687 chr12:015327687 0 W/15327687-15327687 FN2212-S SNP G -> C AC=1;AN=190;BQB=0.993598;DP=5185;DP4=2215,2593,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27428e-06;MQSB=0.787946;RPB=0.346674;SGB=58.2031;VDB=0.176107;EFF=INTRON(MODIFIER||||200|LOC_Os12g26280|protein_coding|CODING|LOC_Os12g26280.1|1|1) FN1344-S.SNP.12:15332902 chr12:015332902 0 W/15332902-15332902 FN1344-S Single Base Substitution C-T INTRON HET SNo: 1142, Mutant_ID: FN1344-S, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN1697-S.SNP.12:15338502 chr12:015338502 0 W/15338502-15338502 FN1697-S SNP T -> G AC=1;AN=188;BQB=0.352629;DP=3355;DP4=1408,1917,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.97758e-08;MQSB=0.92695;RPB=0.0594575;SGB=-36.4511;VDB=0.208773;EFF=INTRON(MODIFIER||||509|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.4|1|1),INTRON(MODIFIER||||598|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.3|1|1),INTRON(MODIFIER||||618|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.2|2|1),INTRON(MODIFIER||||618|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.1|1|1),INTRON(MODIFIER||||481|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.5|1|1),INTRON(MODIFIER||||341|LOC_Os12g26290|protein_coding|CODING|LOC_Os12g26290.6|1|1) FN2426.SNP.12:15349105 chr12:015349105 0 W/15349105-15349105 FN2426 SNP C -> T AC=1;AN=200;BQB=0.747557;DP=4273;DP4=1903,2068,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.02144e-08;MQSB=0.949392;RPB=0.209418;SGB=43.8747;VDB=0.229523;EFF=INTERGENIC(MODIFIER||||||||||1) FN1537-S.SNP.12:15353133 chr12:015353133 0 W/15353133-15353133 FN1537-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g26310 retrotransposon protein, putative, unclassified, expressed SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN1307-S.SNP.12:15356276 chr12:015356276 0 W/15356276-15356276 FN1307-S Single Base Substitution T-G INTRON HET SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN1516-S.SNP.12:15356719 chr12:015356719 0 W/15356719-15356719 FN1516-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g26310 retrotransposon protein, putative, unclassified, expressed SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN4119-S.SNP.12:15357050 chr12:015357050 0 W/15357050-15357050 FN4119-S SNP C -> G AC=2;AN=182;BQB=0.53187;DP=3131;DP4=1464,1606,7,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=9.83674e-09;MQSB=0.345613;RPB=0.192296;SGB=23.1441;VDB=0.795035;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gta/Cta|V752L|1932|LOC_Os12g26310|protein_coding|CODING|LOC_Os12g26310.1|5|1) FN2691-S.SNP.12:15366433 chr12:015366433 0 W/15366433-15366433 FN2691-S SNP T -> A AC=2;AN=200;BQB=0.547408;DP=4874;DP4=2332,2208,24,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.39872e-30;MQSB=0.95393;RPB=0.409003;SGB=162.845;VDB=0.061484;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgT|R349|807|LOC_Os12g26320|protein_coding|CODING|LOC_Os12g26320.1|4|1) FN2179-S.SNP.12:15367884 chr12:015367884 0 W/15367884-15367884 FN2179-S SNP C -> G AC=1;AN=168;BQB=0.986466;DP=3322;DP4=1535,1759,7,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.82199e-10;MQSB=0.935222;RPB=0.95715;SGB=48.4712;VDB=0.125356;EFF=SPLICE_SITE_ACCEPTOR(HIGH||||807|LOC_Os12g26320|protein_coding|CODING|LOC_Os12g26320.1|2|1),INTRON(MODIFIER||||807|LOC_Os12g26320|protein_coding|CODING|LOC_Os12g26320.1|1|1);LOF=(LOC_Os12g26320|LOC_Os12g26320|1|1.00) FN-411.SNP.12:15368557 chr12:015368557 0 W/15368557-15368557 FN-411 Single Base Substitution A-G INTERGENIC HOMO SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2444.SNP.12:15369050 chr12:015369050 0 W/15369050-15369050 FN2444 SNP T -> G AC=1;AN=200;BQB=0.351982;DP=5044;DP4=2464,2246,9,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000594766;MQB=5.1544e-10;MQSB=0.999993;RPB=0.468392;SGB=9.48993;VDB=0.318302;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.12:15369562 chr12:015369562 0 W/15369562-15369562 FN1673-S SNP G -> A AC=1;AN=188;BQB=0.846133;DP=3916;DP4=1896,1970,11,15;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00127681;MQB=1.06259e-06;MQSB=0.0168286;RPB=0.720067;SGB=-70.6427;VDB=0.614017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2230-S.SNP.12:15372897 chr12:015372897 0 W/15372897-15372897 FN2230-S SNP C -> T AC=1;AN=190;BQB=0.856705;DP=4909;DP4=2274,2302,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.14503e-06;MQSB=0.978105;RPB=0.920861;SGB=1.00337;VDB=0.432226;EFF=INTERGENIC(MODIFIER||||||||||1) FN439-S.SNP.12:15373126 chr12:015373126 0 W/15373126-15373126 FN439-S Single Base Substitution T-A INTERGENIC HET SNo: 438, Mutant_ID: FN439-S, Generation: M2, Mutations: 78, Genes: 25, Seed availability: Yes. FN1379-S.SNP.12:15378508 chr12:015378508 0 W/15378508-15378508 FN1379-S Single Base Substitution T-C INTERGENIC HET SNo: 1165, Mutant_ID: FN1379-S, Generation: M2, Mutations: 98, Genes: 90, Seed availability: Yes. FN2200-S.SNP.12:15382123 chr12:015382123 0 W/15382123-15382123 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.771378;DP=5030;DP4=2344,2278,11,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.40514e-13;MQSB=0.57346;RPB=0.870032;SGB=22.7576;VDB=0.779138;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.12:15382601 chr12:015382601 0 W/15382601-15382601 FN2486 SNP C -> T AC=1;AN=200;BQB=0.998;DP=4748;DP4=2207,2268,11,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.12902e-12;MQSB=0.980346;RPB=0.824308;SGB=91.1059;VDB=0.210109;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.12:15387456 chr12:015387456 0 W/15387456-15387456 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.974441;DP=7229;DP4=3729,3166,10,12;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0210264;MQB=2.46956e-06;MQSB=0.0379825;RPB=0.990545;SGB=68.91;VDB=0.00531182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E1516K|1685|LOC_Os12g26340|protein_coding|CODING|LOC_Os12g26340.1|3|1) FN3659-S.SNP.12:15387881 chr12:015387881 0 W/15387881-15387881 FN3659-S SNP G -> C AC=1;AN=190;BQB=0.961755;DP=5156;DP4=2445,2550,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.140031;MQB=0.15813;MQSB=1.70472e-09;RPB=0.231164;SGB=30.8803;VDB=0.283405;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aGc|T1374S|1685|LOC_Os12g26340|protein_coding|CODING|LOC_Os12g26340.1|3|1) FN1468-S.SNP.12:15391786 chr12:015391786 0 W/15391786-15391786 FN1468-S Single Base Substitution A-G INTRON HET SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1419-S.SNP.12:15394368 chr12:015394368 0 W/15394368-15394368 FN1419-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN3493-S.SNP.12:15395462 chr12:015395462 0 W/15395462-15395462 FN3493-S SNP C -> T AC=1;AN=184;BQB=0.808096;DP=4231;DP4=2344,1784,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0595604;MQB=0.9795;MQSB=1.06683e-10;RPB=0.420393;SGB=48.7425;VDB=0.817927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.12:15395602 chr12:015395602 0 W/15395602-15395602 FN1103-S Single Base Substitution C-T INTERGENIC HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN3539-S.SNP.12:15399105 chr12:015399105 0 W/15399105-15399105 FN3539-S SNP C -> T AC=1;AN=188;BQB=0.694342;DP=2869;DP4=1494,1266,3,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00214782;MQSB=0.924098;RPB=0.694342;SGB=30.8063;VDB=0.052315;EFF=INTERGENIC(MODIFIER||||||||||1) FN2212-S.SNP.12:15402818 chr12:015402818 0 W/15402818-15402818 FN2212-S SNP T -> C AC=2;AN=190;BQB=0.843452;DP=4855;DP4=1956,2473,31,43;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000205973;MQB=1.94295e-37;MQSB=0.563935;RPB=0.71452;SGB=242.804;VDB=0.915132;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.12:15404140 chr12:015404140 0 W/15404140-15404140 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.746396;DP=3045;DP4=1468,1475,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.82072e-08;MQSB=0.947305;RPB=0.9867;SGB=2.23696;VDB=0.622511;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.12:15404942 chr12:015404942 0 W/15404942-15404942 FN1476-S Single Base Substitution G-A INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN2146-S.SNP.12:15407823 chr12:015407823 0 W/15407823-15407823 FN2146-S SNP T -> G AC=1;AN=168;BQB=0.00487547;DP=2911;DP4=1254,1615,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.65377e-08;MQSB=0.999995;RPB=0.737666;SGB=11.3448;VDB=0.684669;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.12:15417287 chr12:015417287 0 W/15417287-15417287 FN1263-S Single Base Substitution C-T INTERGENIC HET SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN1573-S.SNP.12:15419371 chr12:015419371 0 W/15419371-15419371 FN1573-S Single Base Substitution A-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1573-S.SNP.12:15419372 chr12:015419372 0 W/15419372-15419372 FN1573-S Single Base Substitution A-T INTERGENIC HET SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN494-S.SNP.12:15419689 chr12:015419689 0 W/15419689-15419689 FN494-S Single Base Substitution T-C INTERGENIC HET SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN-307.SNP.12:15419977 chr12:015419977 0 W/15419977-15419977 FN-307 Single Base Substitution A-C INTERGENIC HET SNo: 302, Mutant_ID: FN-307, Generation: M2, Mutations: 46, Genes: 10, Seed availability: Yes. FN3522-S.SNP.12:15425754 chr12:015425754 0 W/15425754-15425754 FN3522-S SNP T -> C AC=1;AN=188;BQB=0.973552;DP=4162;DP4=2200,1891,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.0987506;MQB=0.671895;MQSB=0.00187808;RPB=0.981472;SGB=67.1521;VDB=0.27949;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttT/ttC|F207|1408|LOC_Os12g26400|protein_coding|CODING|LOC_Os12g26400.1|1|1) FN961-S.SNP.12:15427805 chr12:015427805 0 W/15427805-15427805 FN961-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g26400 retrotransposon protein, putative, unclassified, expressed SNo: 865, Mutant_ID: FN961-S, Generation: M2, Mutations: 77, Genes: 19, Seed availability: Yes. FN3580-S.SNP.12:15432355 chr12:015432355 0 W/15432355-15432355 FN3580-S SNP G -> C AC=1;AN=188;BQB=0.532613;DP=2683;DP4=1129,1486,7,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00111815;MQB=0.000112567;MQSB=0.675711;RPB=0.289674;SGB=58.0655;VDB=0.197354;EFF=INTERGENIC(MODIFIER||||||||||1) FN282-S.SNP.12:15436367 chr12:015436367 0 W/15436367-15436367 FN282-S Single Base Substitution A-G INTERGENIC HOMO SNo: 278, Mutant_ID: FN282-S, Generation: M2, Mutations: 53, Genes: 88, Seed availability: Yes. FN1445-S.SNP.12:15437905 chr12:015437905 0 W/15437905-15437905 FN1445-S Single Base Substitution C-A INTERGENIC HET SNo: 1216, Mutant_ID: FN1445-S, Generation: M2, Mutations: 56, Genes: 10, Seed availability: Yes. FN2134-S.SNP.12:15442902 chr12:015442902 0 W/15442902-15442902 FN2134-S SNP G -> T AC=1;AN=168;BQB=0.624151;DP=1546;DP4=793,695,18,11;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0;MQB=0.000168489;MQSB=0.992208;RPB=0.987472;SGB=44.349;VDB=0.867223;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S591Y|724|LOC_Os12g26420|protein_coding|CODING|LOC_Os12g26420.1|2|1) FN591-S.SNP.12:15455195 chr12:015455195 0 W/15455195-15455195 FN591-S Single Base Substitution G-T INTERGENIC HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN980-S.SNP.12:15456713 chr12:015456713 0 W/15456713-15456713 FN980-S Single Base Substitution G-A INTERGENIC HET SNo: 884, Mutant_ID: FN980-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN1389-S.SNP.12:15459930 chr12:015459930 0 W/15459930-15459930 FN1389-S Single Base Substitution T-A INTERGENIC HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2262-S.SNP.12:15460409 chr12:015460409 0 W/15460409-15460409 FN2262-S SNP A -> G AC=1;AN=190;BQB=0.163429;DP=5400;DP4=2570,2397,8,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.9656e-11;MQSB=0.345063;RPB=0.959785;SGB=44.0907;VDB=0.329058;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.12:15467998 chr12:015467998 0 W/15467998-15467998 W502-3-4 Single Base Substitution T-A INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN2121-S.SNP.12:15472018 chr12:015472018 0 W/15472018-15472018 FN2121-S SNP A -> T AC=1;AN=168;BQB=0.0208625;DP=4424;DP4=2079,2295,17,16;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=5.38277e-06;MQSB=0.990243;RPB=0.293158;SGB=-196.035;VDB=0.735753;EFF=INTERGENIC(MODIFIER||||||||||1) FN1490-S.SNP.12:15473060 chr12:015473060 0 W/15473060-15473060 FN1490-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1252, Mutant_ID: FN1490-S, Generation: M2, Mutations: 65, Genes: 10, Seed availability: Yes. FN1529-S.SNP.12:15473078 chr12:015473078 0 W/15473078-15473078 FN1529-S Single Base Substitution C-G UTR_3_PRIME HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN496-S.SNP.12:15486966 chr12:015486966 0 W/15486966-15486966 FN496-S Single Base Substitution G-C INTERGENIC HET SNo: 494, Mutant_ID: FN496-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN_955-1.SNP.12:15489492 chr12:015489492 0 W/15489492-15489492 FN_955-1 Single Base Substitution C-T HET SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. FN3366-S.SNP.12:15491873 chr12:015491873 0 W/15491873-15491873 FN3366-S SNP T -> G AC=1;AN=184;BQB=0.969651;DP=3387;DP4=1491,1762,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.224978;MQB=0.236939;MQSB=0.0136479;RPB=0.378723;SGB=89.4385;VDB=0.0185262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Cag|K472Q|817|LOC_Os12g26500|protein_coding|CODING|LOC_Os12g26500.1|3|1) FN2659-S.SNP.12:15495816 chr12:015495816 0 W/15495816-15495816 FN2659-S SNP A -> C AC=1;AN=200;BQB=0.999887;DP=4295;DP4=2021,2071,6,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32338e-08;MQSB=0.382995;RPB=0.949962;SGB=-13.7154;VDB=0.958046;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.12:15498036 chr12:015498036 0 W/15498036-15498036 FN1231-S Single Base Substitution G-T INTERGENIC HET SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. FN1423-S.SNP.12:15500269 chr12:015500269 0 W/15500269-15500269 FN1423-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3805-S.SNP.12:15508000 chr12:015508000 0 W/15508000-15508000 FN3805-S SNP A -> C AC=1;AN=190;BQB=0.920166;DP=2506;DP4=1074,1312,7,20;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64163e-14;MQSB=0.941902;RPB=0.046287;SGB=54.3062;VDB=0.00488514;EFF=INTRON(MODIFIER||||54|LOC_Os12g26530|protein_coding|CODING|LOC_Os12g26530.1|1|1) FN987-S.SNP.12:15510317 chr12:015510317 0 W/15510317-15510317 FN987-S Single Base Substitution T-A INTRON HET SNo: 891, Mutant_ID: FN987-S, Generation: M2, Mutations: 54, Genes: 11, Seed availability: Yes. FN2431.SNP.12:15523470 chr12:015523470 0 W/15523470-15523470 FN2431 SNP T -> G AC=1;AN=200;BQB=0.999478;DP=4450;DP4=2206,1914,12,6;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0132584;MQB=0.40049;MQSB=0.00587196;RPB=0.364645;SGB=9.48993;VDB=0.234841;EFF=INTERGENIC(MODIFIER||||||||||1) FN-296.SNP.12:15526604 chr12:015526604 0 W/15526604-15526604 FN-296 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g26560 retrotransposon protein, putative, unclassified, expressed SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN1228-S.SNP.12:15527916 chr12:015527916 0 W/15527916-15527916 FN1228-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g26560 retrotransposon protein, putative, unclassified, expressed SNo: 1053, Mutant_ID: FN1228-S, Generation: M2, Mutations: 83, Genes: 12, Seed availability: Yes. FN4101-S.SNP.12:15535696 chr12:015535696 0 W/15535696-15535696 FN4101-S SNP T -> C AC=1;AN=182;BQB=0.877587;DP=2933;DP4=1478,1403,2,6;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00306853;MQB=0.00222844;MQSB=0.972076;RPB=0.999036;SGB=30.5793;VDB=0.648709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2296.SNP.12:15540992 chr12:015540992 0 W/15540992-15540992 FN2296 SNP G -> A AC=1;AN=192;BQB=0.619401;DP=5297;DP4=2244,2801,3,11;HOB=5.42535e-05;ICB=0.000109072;MQ=40;MQ0F=0.0377572;MQB=0.311333;MQSB=0;RPB=0.865607;SGB=21.2209;VDB=0.768163;EFF=INTERGENIC(MODIFIER||||||||||1) FN1497-S.SNP.12:15541007 chr12:015541007 0 W/15541007-15541007 FN1497-S Single Base Substitution G-A INTERGENIC HET SNo: 1257, Mutant_ID: FN1497-S, Generation: M2, Mutations: 84, Genes: 17, Seed availability: Yes. FN1505-S.SNP.12:15542227 chr12:015542227 0 W/15542227-15542227 FN1505-S Single Base Substitution G-A INTERGENIC HET SNo: 1261, Mutant_ID: FN1505-S, Generation: M2, Mutations: 95, Genes: 14, Seed availability: Yes. FN3872-S.SNP.12:15542736 chr12:015542736 0 W/15542736-15542736 FN3872-S SNP A -> G AC=2;AN=158;BQB=0.992805;DP=2629;DP4=1299,1085,10,9;HOB=0.024996;ICB=0.493752;MQ=39;MQ0F=0.0406999;MQB=0.0496552;MQSB=2.70352e-07;RPB=0.6674;SGB=30.927;VDB=0.860676;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.12:15542736 chr12:015542736 0 W/15542736-15542736 FN3971-S SNP A -> G AC=1;AN=168;BQB=0.973501;DP=2621;DP4=1311,1049,8,3;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0419687;MQB=0.256936;MQSB=2.70144e-05;RPB=0.484644;SGB=27.8864;VDB=0.477182;EFF=INTERGENIC(MODIFIER||||||||||1) FN1243-S.SNP.12:15572998 chr12:015572998 0 W/15572998-15572998 FN1243-S Single Base Substitution C-T INTERGENIC HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2304.SNP.12:15572998 chr12:015572998 0 W/15572998-15572998 FN2304 SNP C -> T AC=1;AN=192;BQB=0.683163;DP=4866;DP4=2134,2432,21,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.09099e-26;MQSB=0.984155;RPB=0.437874;SGB=-98.9565;VDB=0.134302;EFF=INTERGENIC(MODIFIER||||||||||1) FN2461.SNP.12:15572998 chr12:015572998 0 W/15572998-15572998 FN2461 SNP C -> T AC=2;AN=200;BQB=0.770772;DP=4829;DP4=2109,2403,29,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.80855e-33;MQSB=0.985554;RPB=0.0713332;SGB=76.9071;VDB=0.463948;EFF=INTERGENIC(MODIFIER||||||||||1) FN4325-S.SNP.12:15573320 chr12:015573320 0 W/15573320-15573320 FN4325-S SNP C -> T AC=2;AN=170;BQB=0.989128;DP=2516;DP4=1374,1048,22,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.29437e-20;MQSB=0.999928;RPB=0.489773;SGB=73.6222;VDB=0.0126961;EFF=INTERGENIC(MODIFIER||||||||||1) FN3433-S.SNP.12:15577773 chr12:015577773 0 W/15577773-15577773 FN3433-S SNP T -> A AC=1;AN=184;BQB=0.874877;DP=3075;DP4=1507,1431,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.00910569;MQB=0.303656;MQSB=3.31667e-17;RPB=0.817452;SGB=57.786;VDB=0.242693;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M173L|582|LOC_Os12g26600|protein_coding|CODING|LOC_Os12g26600.1|1|1) FN4088-S.SNP.12:15578821 chr12:015578821 0 W/15578821-15578821 FN4088-S SNP C -> G AC=1;AN=182;BQB=0.967944;DP=3243;DP4=1315,1852,5,11;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0240518;MQB=0.000110289;MQSB=0.20165;RPB=0.999456;SGB=46.1603;VDB=0.0735894;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.12:15580181 chr12:015580181 0 W/15580181-15580181 FN2268-S SNP T -> G AC=1;AN=190;BQB=0.251238;DP=4859;DP4=1941,2470,4,8;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.010496;MQB=0.387356;MQSB=0;RPB=0.991195;SGB=49.0954;VDB=0.118129;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.12:15582537 chr12:015582537 0 W/15582537-15582537 FN2462 SNP G -> A AC=1;AN=200;BQB=0.996918;DP=4465;DP4=2145,2063,6,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000223964;MQB=8.10947e-06;MQSB=0.683907;RPB=0.880059;SGB=13.8539;VDB=0.99414;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cat/Tat|H1127Y|1424|LOC_Os12g26610|protein_coding|CODING|LOC_Os12g26610.1|1|1) FN-400.SNP.12:15584391 chr12:015584391 0 W/15584391-15584391 FN-400 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g26610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 386, Mutant_ID: FN-400, Generation: M2, Mutations: 40, Genes: 91, Seed availability: Yes. FN2637-S.SNP.12:15586441 chr12:015586441 0 W/15586441-15586441 FN2637-S SNP C -> G AC=2;AN=200;BQB=0.46564;DP=4621;DP4=2187,2117,24,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.64378e-27;MQSB=0.578876;RPB=0.860829;SGB=220.051;VDB=0.379222;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agG/agC|R604S|683|LOC_Os12g26620|protein_coding|CODING|LOC_Os12g26620.1|2|1) FN4051-S.SNP.12:15589990 chr12:015589990 0 W/15589990-15589990 FN4051-S SNP T -> A AC=1;AN=168;BQB=0.904735;DP=2432;DP4=1348,881,11,15;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.0139803;MQB=0.0528867;MQSB=0.046364;RPB=0.906628;SGB=48.9237;VDB=0.387982;EFF=INTRON(MODIFIER||||683|LOC_Os12g26620|protein_coding|CODING|LOC_Os12g26620.1|1|1) FN2311.SNP.12:15591393 chr12:015591393 0 W/15591393-15591393 FN2311 SNP T -> C AC=2;AN=192;BQB=0.658522;DP=4400;DP4=2095,1961,22,22;HOB=0.0206163;ICB=0.494846;MQ=26;MQ0F=0.0552273;MQB=0.976025;MQSB=0.360578;RPB=0.202186;SGB=98.1513;VDB=0.18462;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T128A|683|LOC_Os12g26620|protein_coding|CODING|LOC_Os12g26620.1|1|1) FN517-S.SNP.12:15592242 chr12:015592242 0 W/15592242-15592242 FN517-S Single Base Substitution T-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN2609-S.SNP.12:15592871 chr12:015592871 0 W/15592871-15592871 FN2609-S SNP C -> T AC=1;AN=198;BQB=0.9963;DP=3757;DP4=1676,1575,13,15;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0263508;MQB=0.0643073;MQSB=0.123008;RPB=0.704313;SGB=-72.4696;VDB=0.0401747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1389-S.SNP.12:15607494 chr12:015607494 0 W/15607494-15607494 FN1389-S Single Base Substitution T-C INTRON HET SNo: 1173, Mutant_ID: FN1389-S, Generation: M2, Mutations: 95, Genes: 44, Seed availability: Yes. FN2688-S.SNP.12:15610995 chr12:015610995 0 W/15610995-15610995 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.515725;DP=4464;DP4=2152,2070,6,9;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00201613;MQB=0.000772353;MQSB=8.12484e-07;RPB=0.29634;SGB=63.4749;VDB=0.128791;EFF=INTERGENIC(MODIFIER||||||||||1) FN_786-4-1.SNP.12:15611271 chr12:015611271 0 W/15611271-15611271 FN_786-4-1 Single Base Substitution C-T Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN3865-S.SNP.12:15611389 chr12:015611389 0 W/15611389-15611389 FN3865-S SNP T -> A AC=2;AN=158;BQB=0.995469;DP=1561;DP4=576,818,9,14;HOB=0.024996;ICB=0.493752;MQ=34;MQ0F=0.0224215;MQB=0.944953;MQSB=0.942327;RPB=0.985472;SGB=67.7679;VDB=0.609744;EFF=INTERGENIC(MODIFIER||||||||||1) FN-154.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN-154 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 154, Mutant_ID: FN-154, Generation: M2, Mutations: 50, Genes: 41, Seed availability: Yes. FN1069-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN1069-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. FN1345-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN1345-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1143, Mutant_ID: FN1345-S, Generation: M2, Mutations: 60, Genes: 14, Seed availability: Yes. FN2180-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN2180-S SNP A -> G AC=2;AN=190;BQB=0.809471;DP=4858;DP4=2287,2113,25,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000205846;MQB=1.23125e-20;MQSB=0.920671;RPB=0.854963;SGB=95.1683;VDB=0.322694;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN2577-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN2577-S SNP A -> G AC=2;AN=186;BQB=0.995608;DP=3856;DP4=1801,1811,20,9;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0.000259336;MQB=1.46916e-16;MQSB=0.957501;RPB=0.574005;SGB=94.0758;VDB=0.133942;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN2723-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN2723-S SNP A -> G AC=2;AN=200;BQB=0.263466;DP=4956;DP4=2439,2236,17,18;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000201776;MQB=3.29219e-19;MQSB=0.994894;RPB=0.972793;SGB=115.978;VDB=0.263118;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN3433-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN3433-S SNP A -> G AC=1;AN=184;BQB=0.560249;DP=2546;DP4=1274,1202,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000392773;MQB=2.45202e-06;MQSB=0.339935;RPB=0.30328;SGB=23.2751;VDB=0.733484;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN3533-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN3533-S SNP A -> G AC=2;AN=188;BQB=0.896362;DP=2735;DP4=1373,1279,10,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000365631;MQB=1.0007e-09;MQSB=0.0876906;RPB=0.135015;SGB=94.4119;VDB=0.229233;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN3721-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN3721-S SNP A -> G AC=1;AN=190;BQB=0.999928;DP=2910;DP4=1443,1364,8,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000343643;MQB=5.60267e-09;MQSB=0.719377;RPB=0.698444;SGB=76.4186;VDB=0.934986;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN4020-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN4020-S SNP A -> G AC=2;AN=168;BQB=0.776926;DP=2760;DP4=1335,1295,15,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000362319;MQB=9.88422e-18;MQSB=0.222256;RPB=0.714003;SGB=176.236;VDB=0.518297;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtA/gtG|V216|507|LOC_Os12g26650|protein_coding|CODING|LOC_Os12g26650.1|3|1) FN419-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN419-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN884-S.SNP.12:15613360 chr12:015613360 0 W/15613360-15613360 FN884-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN2314.SNP.12:15643040 chr12:015643040 0 W/15643040-15643040 FN2314 SNP C -> T AC=1;AN=192;BQB=0.365474;DP=4853;DP4=2362,1978,5,7;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=0.000149728;MQSB=4.79503e-05;RPB=0.957629;SGB=49.2105;VDB=0.769043;EFF=INTERGENIC(MODIFIER||||||||||1) FN3950-S.SNP.12:15647255 chr12:015647255 0 W/15647255-15647255 FN3950-S SNP C -> T AC=1;AN=168;BQB=0.963284;DP=2514;DP4=1133,1271,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.63917e-10;MQSB=0.95965;RPB=0.69881;SGB=51.902;VDB=0.906702;EFF=INTERGENIC(MODIFIER||||||||||1) FN2676-S.SNP.12:15653586 chr12:015653586 0 W/15653586-15653586 FN2676-S SNP A -> C AC=1;AN=200;BQB=0.920357;DP=4672;DP4=2112,2389,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.91063e-09;MQSB=0.993052;RPB=0.683229;SGB=40.2696;VDB=0.935098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agA/agC|R512S|896|LOC_Os12g26710|protein_coding|CODING|LOC_Os12g26710.1|4|1) FN1337-S.SNP.12:15655556 chr12:015655556 0 W/15655556-15655556 FN1337-S Single Base Substitution T-C INTERGENIC HET SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2649-S.SNP.12:15659424 chr12:015659424 0 W/15659424-15659424 FN2649-S SNP A -> G AC=1;AN=200;BQB=0.00855376;DP=4568;DP4=2159,2045,8,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26675e-10;MQSB=0.89965;RPB=0.705302;SGB=-85.7004;VDB=0.659349;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.12:15660655 chr12:015660655 0 W/15660655-15660655 FN2674-S SNP C -> G AC=1;AN=200;BQB=0.987924;DP=5021;DP4=2240,2500,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.41325e-12;MQSB=0.985422;RPB=0.131616;SGB=100.316;VDB=0.988672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.12:15661550 chr12:015661550 0 W/15661550-15661550 FN3760-S SNP A -> G AC=1;AN=190;BQB=0.950323;DP=2455;DP4=1196,1192,2,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.34904e-07;MQSB=0.941796;RPB=0.586953;SGB=39.9877;VDB=0.256733;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.12:15661762 chr12:015661762 0 W/15661762-15661762 FN3848-S SNP G -> T AC=1;AN=158;BQB=0.892285;DP=2543;DP4=1330,1089,8,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.44176e-07;MQSB=0.966364;RPB=0.971091;SGB=30.704;VDB=0.868582;EFF=INTERGENIC(MODIFIER||||||||||1) FN3851-S.SNP.12:15661800 chr12:015661800 0 W/15661800-15661800 FN3851-S SNP T -> C AC=1;AN=158;BQB=0.999568;DP=2549;DP4=1217,1144,7,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000267062;MQSB=0.912978;RPB=0.600439;SGB=9.60209;VDB=0.105532;EFF=INTERGENIC(MODIFIER||||||||||1) FN4156-S.SNP.12:15671082 chr12:015671082 0 W/15671082-15671082 FN4156-S SNP A -> G AC=1;AN=170;BQB=0.989591;DP=2664;DP4=1214,1380,7,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.67907e-09;MQSB=0.909664;RPB=0.902251;SGB=56.7575;VDB=0.688029;EFF=SYNONYMOUS_CODING(LOW|SILENT|agA/agG|R345|725|LOC_Os12g26740|protein_coding|CODING|LOC_Os12g26740.1|2|1) FN3357-S.SNP.12:15674749 chr12:015674749 0 W/15674749-15674749 FN3357-S SNP T -> G AC=1;AN=184;BQB=0.66699;DP=3159;DP4=1557,1486,15,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00316556;MQB=2.00925e-14;MQSB=0.940055;RPB=0.540192;SGB=-40.5343;VDB=0.31905;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Cct|T471P|720|LOC_Os12g26750|protein_coding|CODING|LOC_Os12g26750.1|1|1) FN457-S.SNP.12:15675458 chr12:015675458 0 W/15675458-15675458 FN457-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3687-S.SNP.12:15679677 chr12:015679677 0 W/15679677-15679677 FN3687-S SNP C -> A AC=1;AN=190;BQB=0.947078;DP=2561;DP4=1281,1094,18,16;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.0745802;MQB=0.346895;MQSB=8.19111e-16;RPB=0.9868;SGB=-4.91383;VDB=0.947329;EFF=INTERGENIC(MODIFIER||||||||||1) FN2096-S.SNP.12:15685050 chr12:015685050 0 W/15685050-15685050 FN2096-S SNP T -> C AC=2;AN=168;BQB=0.849347;DP=3420;DP4=1591,1772,14,27;HOB=0.0235261;ICB=0.494119;MQ=35;MQ0F=0.0669591;MQB=0.327221;MQSB=5.77187e-34;RPB=0.875465;SGB=39.9611;VDB=0.226815;EFF=INTERGENIC(MODIFIER||||||||||1) FN3687-S.SNP.12:15687570 chr12:015687570 0 W/15687570-15687570 FN3687-S SNP C -> A AC=1;AN=190;BQB=0.980407;DP=4132;DP4=1993,2004,21,7;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.117861;MQB=0.924799;MQSB=7.43277e-25;RPB=0.0672774;SGB=89.4087;VDB=0.567175;EFF=INTERGENIC(MODIFIER||||||||||1) FN4160-S.SNP.12:15688614 chr12:015688614 0 W/15688614-15688614 FN4160-S SNP G -> A AC=1;AN=170;BQB=0.991149;DP=2699;DP4=1291,1333,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0548351;MQB=0.0973145;MQSB=0.883847;RPB=0.65536;SGB=56.7575;VDB=0.11079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V337M|1226|LOC_Os12g26780|protein_coding|CODING|LOC_Os12g26780.1|1|1) FN2380.SNP.12:15691744 chr12:015691744 0 W/15691744-15691744 FN2380 SNP C -> G AC=1;AN=192;BQB=0.796507;DP=5179;DP4=2642,2271,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=24;MQ0F=0.244256;MQB=0.799798;MQSB=0;RPB=0.82785;SGB=90.2896;VDB=0.256667;EFF=INTERGENIC(MODIFIER||||||||||1) FN3343-S.SNP.12:15701653 chr12:015701653 0 W/15701653-15701653 FN3343-S SNP C -> T AC=1;AN=184;BQB=0.984234;DP=3011;DP4=1410,1479,11,12;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0109598;MQB=0.000154957;MQSB=1.03193e-09;RPB=0.581056;SGB=98.4821;VDB=0.877542;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.12:15706585 chr12:015706585 0 W/15706585-15706585 FN1262-S Single Base Substitution T-G INTERGENIC HET SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1650-S.SNP.12:15708415 chr12:015708415 0 W/15708415-15708415 FN1650-S Single Base Substitution C-T INTERGENIC Homo SNo: 1354, Mutant_ID: FN1650-S, Generation: M2, Mutations: 103, Genes: 31, Seed availability: Yes. FN2456.SNP.12:15709312 chr12:015709312 0 W/15709312-15709312 FN2456 SNP C -> T AC=1;AN=200;BQB=0.201867;DP=2113;DP4=1054,829,6,3;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.114529;MQB=0.862593;MQSB=5.95521e-10;RPB=0.904272;SGB=22.2439;VDB=0.369599;EFF=INTERGENIC(MODIFIER||||||||||1) FN3532-S.SNP.12:15717575 chr12:015717575 0 W/15717575-15717575 FN3532-S SNP G -> A AC=1;AN=188;BQB=0.999804;DP=3123;DP4=1331,1709,9,10;HOB=5.65867e-05;ICB=0.000113775;MQ=15;MQ0F=0.476465;MQB=0.360795;MQSB=0;RPB=0.247015;SGB=57.244;VDB=0.606666;EFF=INTERGENIC(MODIFIER||||||||||1) FN1202-S.SNP.12:15719080 chr12:015719080 0 W/15719080-15719080 FN1202-S Single Base Substitution A-C INTERGENIC HET SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN-377.SNP.12:15719242 chr12:015719242 0 W/15719242-15719242 FN-377 Single Base Substitution A-G INTERGENIC HET SNo: 365, Mutant_ID: FN-377, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. FN3781-S.SNP.12:15720481 chr12:015720481 0 W/15720481-15720481 FN3781-S SNP A -> G AC=1;AN=190;BQB=0.982967;DP=2682;DP4=1368,1218,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0238628;MQB=0.311264;MQSB=0.0981911;RPB=0.364027;SGB=44.5415;VDB=0.354229;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccT/ccC|P317|599|LOC_Os12g26830|protein_coding|CODING|LOC_Os12g26830.1|4|1) FN552-S.SNP.12:15721677 chr12:015721677 0 W/15721677-15721677 FN552-S Single Base Substitution G-A INTRON HET SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN620-S.SNP.12:15722388 chr12:015722388 0 W/15722388-15722388 FN620-S Single Base Substitution G-C INTRON HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN3387-S.SNP.12:15723995 chr12:015723995 0 W/15723995-15723995 FN3387-S SNP T -> C AC=1;AN=184;BQB=0.531788;DP=3869;DP4=1880,1696,17,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.13802;MQB=0.960377;MQSB=0;RPB=0.600833;SGB=-11.5833;VDB=0.636541;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.12:15729029 chr12:015729029 0 W/15729029-15729029 FN-247 Single Base Substitution A-T INTRON HET SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN4165-S.SNP.12:15746588 chr12:015746588 0 W/15746588-15746588 FN4165-S SNP G -> A AC=1;AN=170;BQB=0.704453;DP=2663;DP4=1281,1319,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0292903;MQB=0.0012208;MQSB=3.84528e-16;RPB=0.909304;SGB=43.4296;VDB=0.63445;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L562F|2022|LOC_Os12g26860|protein_coding|CODING|LOC_Os12g26860.1|2|1) FN3687-S.SNP.12:15746801 chr12:015746801 0 W/15746801-15746801 FN3687-S SNP C -> T AC=1;AN=190;BQB=0.868546;DP=3448;DP4=1446,1871,17,12;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.287703;MQB=0.140798;MQSB=2.05231e-10;RPB=0.999974;SGB=92.9626;VDB=0.602641;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gca/Aca|A491T|2022|LOC_Os12g26860|protein_coding|CODING|LOC_Os12g26860.1|2|1) FN1709-S.SNP.12:15752614 chr12:015752614 0 W/15752614-15752614 FN1709-S SNP A -> G AC=1;AN=188;BQB=0.225227;DP=3039;DP4=1277,1681,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=41;MQ0F=0.0467259;MQB=0.298933;MQSB=1.45529e-26;RPB=0.988569;SGB=-35.9944;VDB=0.357874;EFF=INTERGENIC(MODIFIER||||||||||1) FN2173-S.SNP.12:15781119 chr12:015781119 0 W/15781119-15781119 FN2173-S SNP A -> T AC=2;AN=168;BQB=0.0735423;DP=3080;DP4=1210,1825,13,17;HOB=0.0235261;ICB=0.494119;MQ=45;MQ0F=0;MQB=0.000194456;MQSB=0.983063;RPB=0.426859;SGB=-79.0524;VDB=0.991272;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I523N|569|LOC_Os12g26950|protein_coding|CODING|LOC_Os12g26950.1|5|1) FN927-S.SNP.12:15788060 chr12:015788060 0 W/15788060-15788060 FN927-S Single Base Substitution C-T INTERGENIC HET SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN1032-S.SNP.12:15789538 chr12:015789538 0 W/15789538-15789538 FN1032-S Single Base Substitution T-C INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN1142-S.SNP.12:15791335 chr12:015791335 0 W/15791335-15791335 FN1142-S Single Base Substitution G-T INTERGENIC HET SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN2192-S.SNP.12:15795235 chr12:015795235 0 W/15795235-15795235 FN2192-S SNP T -> C AC=2;AN=190;BQB=0.467184;DP=4811;DP4=2065,2242,27,32;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0295157;MQB=0.218567;MQSB=0;RPB=0.874016;SGB=-181.713;VDB=0.573243;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctT/ctC|L187|985|LOC_Os12g26970|protein_coding|CODING|LOC_Os12g26970.1|2|1) FN2619-S.SNP.12:15797176 chr12:015797176 0 W/15797176-15797176 FN2619-S SNP T -> A AC=1;AN=198;BQB=0.854313;DP=4061;DP4=1937,1893,21,19;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.0270869;MQB=6.94105e-06;MQSB=0.495162;RPB=0.996236;SGB=178.212;VDB=0.783284;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taA|Y707*|985|LOC_Os12g26970|protein_coding|CODING|LOC_Os12g26970.1|5|1);LOF=(LOC_Os12g26970|LOC_Os12g26970|1|1.00);NMD=(LOC_Os12g26970|LOC_Os12g26970|1|1.00) FN3854-S.SNP.12:15799499 chr12:015799499 0 W/15799499-15799499 FN3854-S SNP C -> A AC=1;AN=158;BQB=0.981707;DP=2118;DP4=1221,830,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000391582;MQSB=0.983531;RPB=0.205195;SGB=29.5899;VDB=0.75368;EFF=INTERGENIC(MODIFIER||||||||||1) FN2488.SNP.12:15802233 chr12:015802233 0 W/15802233-15802233 FN2488 SNP G -> A AC=1;AN=200;BQB=0.00621891;DP=4004;DP4=1962,1738,17,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0004995;MQB=3.08443e-07;MQSB=0.0889562;RPB=0.810617;SGB=-10.6896;VDB=0.284248;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.12:15803273 chr12:015803273 0 W/15803273-15803273 FN-394 Single Base Substitution G-A INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN-202.SNP.12:15804124 chr12:015804124 0 W/15804124-15804124 FN-202 Single Base Substitution G-A INTERGENIC HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN3305-S.SNP.12:15808040 chr12:015808040 0 W/15808040-15808040 FN3305-S SNP G -> A AC=1;AN=184;BQB=0.923018;DP=3058;DP4=1257,1692,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.54451e-06;MQSB=0.838124;RPB=0.979351;SGB=35.7479;VDB=0.461728;EFF=INTERGENIC(MODIFIER||||||||||1) FN2412.SNP.12:15810132 chr12:015810132 0 W/15810132-15810132 FN2412 SNP T -> C AC=2;AN=200;BQB=0.94396;DP=4960;DP4=2607,2057,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.20484e-20;MQSB=0.898323;RPB=0.997083;SGB=-1.00683;VDB=0.808138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Gtt|I231V|234|LOC_Os12g26990|protein_coding|CODING|LOC_Os12g26990.1|4|1) FN3416-S.SNP.12:15823115 chr12:015823115 0 W/15823115-15823115 FN3416-S SNP A -> T AC=1;AN=184;BQB=0.923387;DP=2616;DP4=1393,1105,4,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.81892e-07;MQSB=0.973733;RPB=0.759919;SGB=53.2642;VDB=0.621197;EFF=INTERGENIC(MODIFIER||||||||||1) FN-52.SNP.12:15826836 chr12:015826836 0 W/15826836-15826836 FN-52 Single Base Substitution C-A INTERGENIC HET SNo: 52, Mutant_ID: FN-52, Generation: M2, Mutations: 45, Genes: 142, Seed availability: Yes. FN982-S.SNP.12:15837213 chr12:015837213 0 W/15837213-15837213 FN982-S Single Base Substitution A-G INTERGENIC HET SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3482-S.SNP.12:15838660 chr12:015838660 0 W/15838660-15838660 FN3482-S SNP C -> A AC=1;AN=184;BQB=0.95739;DP=2863;DP4=1442,1335,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.5557e-06;MQSB=0.823392;RPB=0.86665;SGB=35.1773;VDB=0.852145;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cTc|R236L|463|LOC_Os12g27050|protein_coding|CODING|LOC_Os12g27050.1|3|1) FN_N1-169-1.SNP.12:15840633 chr12:015840633 0 W/15840633-15840633 FN_N1-169-1 Single Base Substitution A-T Homo SNo: 1381, Mutant_ID: FN_N1-169-1, Generation: M3, Mutations: 74, Genes: 19, Seed availability: No. FN624-S.SNP.12:15845984 chr12:015845984 0 W/15845984-15845984 FN624-S Single Base Substitution C-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN624-S.SNP.12:15845985 chr12:015845985 0 W/15845985-15845985 FN624-S Single Base Substitution C-T INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN619-S.SNP.12:15853198 chr12:015853198 0 W/15853198-15853198 FN619-S Single Base Substitution A-T INTERGENIC HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN2453.SNP.12:15856422 chr12:015856422 0 W/15856422-15856422 FN2453 SNP G -> T AC=1;AN=200;BQB=0.111364;DP=4185;DP4=2096,1854,3,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.70724e-06;MQSB=0.917944;RPB=0.51793;SGB=40.4492;VDB=0.821672;EFF=INTERGENIC(MODIFIER||||||||||1) FN4344-S.SNP.12:15871413 chr12:015871413 0 W/15871413-15871413 FN4344-S SNP C -> T AC=1;AN=170;BQB=0.998851;DP=2572;DP4=1133,1375,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=7.40499e-07;MQSB=0.978142;RPB=0.989049;SGB=38.987;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN2646-S.SNP.12:15877551 chr12:015877551 0 W/15877551-15877551 FN2646-S SNP C -> T AC=1;AN=200;BQB=0.474473;DP=5022;DP4=2471,2310,7,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.3109e-10;MQSB=0.773668;RPB=0.865598;SGB=61.9006;VDB=0.567935;EFF=INTERGENIC(MODIFIER||||||||||1) FN-87.SNP.12:15879852 chr12:015879852 0 W/15879852-15879852 FN-87 Single Base Substitution G-A INTERGENIC HET SNo: 87, Mutant_ID: FN-87, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN3511-S.SNP.12:15883321 chr12:015883321 0 W/15883321-15883321 FN3511-S SNP G -> A AC=1;AN=188;BQB=0.987468;DP=2786;DP4=1239,1471,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.72666e-05;MQSB=0.70038;RPB=0.78183;SGB=30.8063;VDB=0.591996;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R1039*|1745|LOC_Os12g27096|protein_coding|CODING|LOC_Os12g27096.1|16|1);LOF=(LOC_Os12g27096|LOC_Os12g27096|1|1.00);NMD=(LOC_Os12g27096|LOC_Os12g27096|1|1.00) FN514-S.SNP.12:15900156 chr12:015900156 0 W/15900156-15900156 FN514-S Single Base Substitution C-T INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN3311-S.SNP.12:15907003 chr12:015907003 0 W/15907003-15907003 FN3311-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1392-S.SNP.12:15910129 chr12:015910129 0 W/15910129-15910129 FN1392-S Single Base Substitution G-C INTRON HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2621-S.SNP.12:15917555 chr12:015917555 0 W/15917555-15917555 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.848425;DP=4848;DP4=2300,2354,9,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.000618812;MQB=1.41291e-08;MQSB=0.80195;RPB=0.981086;SGB=95.7111;VDB=0.329522;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V771|904|LOC_Os12g27120|protein_coding|CODING|LOC_Os12g27120.1|6|1) FN530-S.SNP.12:15920654 chr12:015920654 0 W/15920654-15920654 FN530-S Single Base Substitution T-G INTERGENIC HET SNo: 527, Mutant_ID: FN530-S, Generation: M2, Mutations: 71, Genes: 22, Seed availability: Yes. FN2301.SNP.12:15924702 chr12:015924702 0 W/15924702-15924702 FN2301 SNP C -> T AC=1;AN=192;BQB=0.874347;DP=5701;DP4=2785,2682,3,9;HOB=5.42535e-05;ICB=0.000109072;MQ=39;MQ0F=0.0515699;MQB=0.433907;MQSB=0.987811;RPB=0.497641;SGB=32.6514;VDB=0.583244;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q257*|441|LOC_Os12g27130|protein_coding|CODING|LOC_Os12g27130.1|3|1) FN4098-S.SNP.12:15941981 chr12:015941981 0 W/15941981-15941981 FN4098-S SNP G -> A AC=1;AN=182;BQB=0.991138;DP=3034;DP4=1503,1474,9,10;HOB=6.03792e-05;ICB=0.000121422;MQ=45;MQ0F=0.0112063;MQB=0.00438917;MQSB=0.792539;RPB=0.93247;SGB=80.1982;VDB=0.353815;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K229|481|LOC_Os12g27160|protein_coding|CODING|LOC_Os12g27160.1|2|1) FN-310.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN-310 Single Base Substitution T-G INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN-36.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN-36 Single Base Substitution T-G INTERGENIC Homo SNo: 36, Mutant_ID: FN-36, Generation: M2, Mutations: 33, Genes: 11, Seed availability: Yes. FN1198-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN1198-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN1657-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN1657-S Single Base Substitution T-G INTERGENIC Homo SNo: 1359, Mutant_ID: FN1657-S, Generation: M2, Mutations: 81, Genes: 33, Seed availability: Yes. FN1732-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN1732-S SNP T -> G AC=2;AN=188;BQB=0.394191;DP=2375;DP4=550,1763,11,23;HOB=0.0210502;ICB=0.494738;MQ=41;MQ0F=0.0206316;MQB=0.585002;MQSB=0.99889;RPB=0.964941;SGB=-43.7584;VDB=0.740818;EFF=INTERGENIC(MODIFIER||||||||||1) FN2403.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN2403 SNP T -> G AC=1;AN=200;BQB=0.508593;DP=3200;DP4=1027,1874,4,5;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.0125;MQB=0.688943;MQSB=0.0224254;RPB=0.992466;SGB=8.64371;VDB=0.886285;EFF=INTERGENIC(MODIFIER||||||||||1) FN2574-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN2574-S SNP T -> G AC=2;AN=198;BQB=0.549236;DP=3458;DP4=1472,1668,13,2;HOB=0.019998;ICB=0.495001;MQ=42;MQ0F=0.0147484;MQB=0.423771;MQSB=0.0390508;RPB=0.563186;SGB=24.1541;VDB=0.707795;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN3520-S SNP T -> G AC=1;AN=188;BQB=0.596299;DP=2840;DP4=1348,1214,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.0084507;MQB=0.326446;MQSB=1.78571e-06;RPB=0.789176;SGB=-16.6296;VDB=0.822708;EFF=INTERGENIC(MODIFIER||||||||||1) FN3928-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN3928-S SNP T -> G AC=1;AN=158;BQB=0.983171;DP=2102;DP4=783,1122,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0133206;MQB=0.35034;MQSB=0.0372588;RPB=0.392218;SGB=28.5576;VDB=0.410799;EFF=INTERGENIC(MODIFIER||||||||||1) FN3970-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN3970-S SNP T -> G AC=1;AN=168;BQB=0.976554;DP=1999;DP4=657,1168,3,7;HOB=7.08617e-05;ICB=0.000142567;MQ=42;MQ0F=0.014007;MQB=0.295559;MQSB=0.142905;RPB=0.0970069;SGB=10.0307;VDB=0.0152419;EFF=INTERGENIC(MODIFIER||||||||||1) FN4083-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN4083-S SNP T -> G AC=2;AN=182;BQB=0.945864;DP=2435;DP4=964,1234,9,29;HOB=0.0217365;ICB=0.494567;MQ=43;MQ0F=0.0106776;MQB=0.695683;MQSB=0.00811013;RPB=0.0784908;SGB=160.513;VDB=0.70384;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN4204-S SNP T -> G AC=1;AN=170;BQB=0.897545;DP=2080;DP4=838,1073,4,5;HOB=6.92042e-05;ICB=0.000139222;MQ=43;MQ0F=0.0125;MQB=0.887675;MQSB=3.69058e-05;RPB=0.900917;SGB=21.1076;VDB=0.447301;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN566-S Single Base Substitution T-G INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN661-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN661-S Single Base Substitution T-G INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN797-S.SNP.12:15943162 chr12:015943162 0 W/15943162-15943162 FN797-S Single Base Substitution T-G INTERGENIC HOMO SNo: 717, Mutant_ID: FN797-S, Generation: M2, Mutations: 52, Genes: 12, Seed availability: Yes. FN1023-S.SNP.12:15948628 chr12:015948628 0 W/15948628-15948628 FN1023-S Single Base Substitution A-G INTERGENIC HET SNo: 919, Mutant_ID: FN1023-S, Generation: M2, Mutations: 96, Genes: 48, Seed availability: Yes. FN3331-S.SNP.12:15951554 chr12:015951554 0 W/15951554-15951554 FN3331-S SNP A -> G AC=2;AN=184;BQB=0.985302;DP=3410;DP4=1387,1845,19,24;HOB=0.0215028;ICB=0.494625;MQ=39;MQ0F=0.0431085;MQB=0.0291022;MQSB=0;RPB=0.740603;SGB=141.402;VDB=0.664705;EFF=INTERGENIC(MODIFIER||||||||||1) FN378-S.SNP.12:15959928 chr12:015959928 0 W/15959928-15959928 FN378-S Single Base Substitution T-C INTRON HOMO SNo: 366, Mutant_ID: FN378-S, Generation: M2, Mutations: 38, Genes: 95, Seed availability: Yes. FN2083-S.SNP.12:15960042 chr12:015960042 0 W/15960042-15960042 FN2083-S SNP G -> A AC=1;AN=168;BQB=0.146121;DP=4189;DP4=2055,1876,209,23;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=0;MQSB=3.05977e-05;RPB=8.57749e-07;SGB=-2758.66;VDB=0.158486;EFF=INTRON(MODIFIER||||251|LOC_Os12g27190|protein_coding|CODING|LOC_Os12g27190.1|1|1) FN1375-S.SNP.12:15963108 chr12:015963108 0 W/15963108-15963108 FN1375-S Single Base Substitution T-A INTRON HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN4040-S.SNP.12:15965546 chr12:015965546 0 W/15965546-15965546 FN4040-S SNP C -> G AC=2;AN=168;BQB=0.992597;DP=2384;DP4=1055,1222,10,10;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.65264e-12;MQSB=0.302438;RPB=0.829615;SGB=83.1885;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN471-S.SNP.12:15965546 chr12:015965546 0 W/15965546-15965546 FN471-S Single Base Substitution C-G INTERGENIC HOMO SNo: 470, Mutant_ID: FN471-S, Generation: M2, Mutations: 55, Genes: 17, Seed availability: Yes. FN3795-S.SNP.12:15966278 chr12:015966278 0 W/15966278-15966278 FN3795-S SNP A -> C AC=2;AN=190;BQB=0.818686;DP=2615;DP4=1289,1158,16,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.07307e-18;MQSB=0.97797;RPB=0.303343;SGB=100.07;VDB=0.625489;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Ctc|I100L|141|LOC_Os12g27210|protein_coding|CODING|LOC_Os12g27210.1|1|1) FN1711-S.SNP.12:15968799 chr12:015968799 0 W/15968799-15968799 FN1711-S SNP G -> A AC=2;AN=188;BQB=0.357833;DP=3339;DP4=1726,1548,28,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.72807e-23;MQSB=0.892369;RPB=0.847706;SGB=-48.3255;VDB=0.12044;EFF=INTERGENIC(MODIFIER||||||||||1) FN3478-S.SNP.12:15975498 chr12:015975498 0 W/15975498-15975498 FN3478-S SNP C -> T AC=1;AN=184;BQB=0.996187;DP=2535;DP4=1265,1188,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.92492e-13;MQSB=0.91189;RPB=0.819694;SGB=84.9167;VDB=0.834929;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.12:15983673 chr12:015983673 0 W/15983673-15983673 FN3383-S SNP G -> C AC=1;AN=184;BQB=0.971005;DP=3001;DP4=1466,1451,16,8;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.00733089;MQB=0.164815;MQSB=0.0185168;RPB=0.604979;SGB=103.004;VDB=0.459449;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttG|F852L|1080|LOC_Os12g27240|protein_coding|CODING|LOC_Os12g27240.1|5|1) FN1039-S.SNP.12:15984451 chr12:015984451 0 W/15984451-15984451 FN1039-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g27240 transposon protein, putative, CACTA, En/Spm sub-class SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1039-S.SNP.12:15984452 chr12:015984452 0 W/15984452-15984452 FN1039-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g27240 transposon protein, putative, CACTA, En/Spm sub-class SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN2412.SNP.12:15989418 chr12:015989418 0 W/15989418-15989418 FN2412 SNP A -> T AC=2;AN=200;BQB=0.400505;DP=4942;DP4=2371,2167,26,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.73884e-21;MQSB=0.614431;RPB=0.982714;SGB=56.0399;VDB=0.0810202;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.12:15990155 chr12:015990155 0 W/15990155-15990155 FN470-S Single Base Substitution T-C INTERGENIC HOMO SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. W246-5-1.SNP.12:15992327 chr12:015992327 0 W/15992327-15992327 W246-5-1 Single Base Substitution G-C INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN-310.SNP.12:16021937 chr12:016021937 0 W/16021937-16021937 FN-310 Single Base Substitution T-C INTERGENIC HET SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN564-S.SNP.12:16031933 chr12:016031933 0 W/16031933-16031933 FN564-S Single Base Substitution C-T INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN3691-S.SNP.12:16032745 chr12:016032745 0 W/16032745-16032745 FN3691-S SNP A -> T AC=2;AN=190;BQB=0.998118;DP=2844;DP4=1448,1314,20,9;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0;MQB=3.34527e-11;MQSB=0.980857;RPB=0.797697;SGB=126.511;VDB=0.827584;EFF=INTERGENIC(MODIFIER||||||||||1) FN1032-S.SNP.12:16035099 chr12:016035099 0 W/16035099-16035099 FN1032-S Single Base Substitution C-T INTERGENIC HET SNo: 928, Mutant_ID: FN1032-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN3308-S.SNP.12:16051972 chr12:016051972 0 W/16051972-16051972 FN3308-S SNP A -> T AC=1;AN=184;BQB=0.70271;DP=2845;DP4=1464,1253,16,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.48825e-11;MQSB=0.995218;RPB=0.872979;SGB=74.4875;VDB=0.613878;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.12:16052271 chr12:016052271 0 W/16052271-16052271 FN701-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN2637-S.SNP.12:16054722 chr12:016054722 0 W/16054722-16054722 FN2637-S SNP G -> A AC=2;AN=200;BQB=0.582023;DP=5117;DP4=2374,2418,24,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.43158e-29;MQSB=0.858339;RPB=0.104074;SGB=247.682;VDB=0.358012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A59V|347|LOC_Os12g27330|protein_coding|CODING|LOC_Os12g27330.1|1|1) FN2709-S.SNP.12:16057394 chr12:016057394 0 W/16057394-16057394 FN2709-S SNP C -> T AC=1;AN=200;BQB=0.0284804;DP=4809;DP4=2127,2337,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.04031e-06;MQSB=0.998502;RPB=0.951775;SGB=24.2746;VDB=0.971828;EFF=INTERGENIC(MODIFIER||||||||||1) FN1744-S.SNP.12:16061087 chr12:016061087 0 W/16061087-16061087 FN1744-S SNP T -> C AC=1;AN=188;BQB=0.67924;DP=2865;DP4=1096,1716,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.0029e-06;MQSB=0.982496;RPB=0.746388;SGB=23.5329;VDB=0.00694486;EFF=INTERGENIC(MODIFIER||||||||||1) FN757-S.SNP.12:16065562 chr12:016065562 0 W/16065562-16065562 FN757-S Single Base Substitution T-C INTERGENIC HOMO SNo: 679, Mutant_ID: FN757-S, Generation: M2, Mutations: 43, Genes: 18, Seed availability: Yes. FN-21.SNP.12:16070043 chr12:016070043 0 W/16070043-16070043 FN-21 Single Base Substitution G-C INTERGENIC Homo SNo: 21, Mutant_ID: FN-21, Generation: M2, Mutations: 34, Genes: 6, Seed availability: Yes. FN_543-2-6.SNP.12:16071854 chr12:016071854 0 W/16071854-16071854 FN_543-2-6 Single Base Substitution C-T Homo SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. W246-5-1.SNP.12:16073253 chr12:016073253 0 W/16073253-16073253 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.12:16073255 chr12:016073255 0 W/16073255-16073255 W246-5-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. W246-5-1.SNP.12:16073258 chr12:016073258 0 W/16073258-16073258 W246-5-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN744-S.SNP.12:16074353 chr12:016074353 0 W/16074353-16074353 FN744-S Single Base Substitution T-G INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN1400-S.SNP.12:16074869 chr12:016074869 0 W/16074869-16074869 FN1400-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN1400-S.SNP.12:16074874 chr12:016074874 0 W/16074874-16074874 FN1400-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g27340 expressed protein SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN2690-S.SNP.12:16086580 chr12:016086580 0 W/16086580-16086580 FN2690-S SNP A -> C AC=1;AN=200;BQB=0.875654;DP=5099;DP4=2447,2376,7,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10743e-14;MQSB=0.979906;RPB=0.26717;SGB=72.7161;VDB=0.658928;EFF=INTERGENIC(MODIFIER||||||||||1) FN389-S.SNP.12:16096555 chr12:016096555 0 W/16096555-16096555 FN389-S Single Base Substitution T-C INTRON HET SNo: 375, Mutant_ID: FN389-S, Generation: M2, Mutations: 77, Genes: 109, Seed availability: Yes. FN2657-S.SNP.12:16117761 chr12:016117761 0 W/16117761-16117761 FN2657-S SNP C -> T AC=2;AN=200;BQB=0.777799;DP=5117;DP4=2398,2369,26,31;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.17255e-32;MQSB=0.979349;RPB=0.0430474;SGB=133.692;VDB=0.649932;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:16120308 chr12:016120308 0 W/16120308-16120308 FN1520-S Single Base Substitution G-A INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN522-S.SNP.12:16130069 chr12:016130069 0 W/16130069-16130069 FN522-S Single Base Substitution G-C INTRON HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN3384-S.SNP.12:16130672 chr12:016130672 0 W/16130672-16130672 FN3384-S SNP A -> T AC=2;AN=184;BQB=0.958925;DP=2866;DP4=1327,1402,15,17;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.5279e-16;MQSB=0.984425;RPB=0.99195;SGB=102.662;VDB=0.7287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aAc|I441N|639|LOC_Os12g27400|protein_coding|CODING|LOC_Os12g27400.1|3|1) FN-142.SNP.12:16130772 chr12:016130772 0 W/16130772-16130772 FN-142 Single Base Substitution C-G INTRON HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN3768-S.SNP.12:16136824 chr12:016136824 0 W/16136824-16136824 FN3768-S SNP G -> A AC=2;AN=190;BQB=0.984437;DP=2814;DP4=1269,1429,14,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.08245e-14;MQSB=0.86252;RPB=0.912253;SGB=92.9626;VDB=0.218813;EFF=INTRON(MODIFIER||||885|LOC_Os12g27410|protein_coding|CODING|LOC_Os12g27410.1|3|1) FN1335-S.SNP.12:16140248 chr12:016140248 0 W/16140248-16140248 FN1335-S Single Base Substitution T-A INTRON HOMO SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2582-S.SNP.12:16140448 chr12:016140448 0 W/16140448-16140448 FN2582-S SNP G -> T AC=1;AN=186;BQB=0.95991;DP=3499;DP4=1829,1409,5,5;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=0.000365953;MQSB=0.643479;RPB=0.765518;SGB=11.1786;VDB=0.525878;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cga/Aga|R158|269|LOC_Os12g27420|protein_coding|CODING|LOC_Os12g27420.1|2|1) FN1318-S.SNP.12:16149129 chr12:016149129 0 W/16149129-16149129 FN1318-S Single Base Substitution C-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN1441-S.SNP.12:16149129 chr12:016149129 0 W/16149129-16149129 FN1441-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN2408.SNP.12:16149129 chr12:016149129 0 W/16149129-16149129 FN2408 SNP C -> T AC=2;AN=200;BQB=0.689929;DP=4616;DP4=2125,2208,20,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.00259965;MQB=6.79921e-20;MQSB=0.0696194;RPB=0.723284;SGB=137.609;VDB=0.237829;EFF=INTERGENIC(MODIFIER||||||||||1) FN669-S.SNP.12:16156177 chr12:016156177 0 W/16156177-16156177 FN669-S Single Base Substitution A-T INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN669-S.SNP.12:16156178 chr12:016156178 0 W/16156178-16156178 FN669-S Single Base Substitution A-T INTRON HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN442-S.SNP.12:16156455 chr12:016156455 0 W/16156455-16156455 FN442-S Single Base Substitution A-T INTRON HET SNo: 441, Mutant_ID: FN442-S, Generation: M2, Mutations: 62, Genes: 22, Seed availability: Yes. FN4138-S.SNP.12:16162396 chr12:016162396 0 W/16162396-16162396 FN4138-S SNP C -> A AC=2;AN=170;BQB=0.73983;DP=2763;DP4=1310,1383,9,9;HOB=0.0232526;ICB=0.494188;MQ=30;MQ0F=0.187115;MQB=0.999712;MQSB=3.0641e-25;RPB=0.991886;SGB=52.0913;VDB=0.735046;EFF=INTERGENIC(MODIFIER||||||||||1) FN2675-S.SNP.12:16167808 chr12:016167808 0 W/16167808-16167808 FN2675-S SNP C -> A AC=1;AN=200;BQB=0.8902;DP=4819;DP4=2402,2192,10,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.86605e-13;MQSB=0.983921;RPB=0.830706;SGB=61.9006;VDB=0.737188;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.12:16178552 chr12:016178552 0 W/16178552-16178552 FN1476-S Single Base Substitution A-G INTERGENIC HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN_777-2-1.SNP.12:16178991 chr12:016178991 0 W/16178991-16178991 FN_777-2-1 Single Base Substitution C-T Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN1583-S.SNP.12:16184264 chr12:016184264 0 W/16184264-16184264 FN1583-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2657-S.SNP.12:16184264 chr12:016184264 0 W/16184264-16184264 FN2657-S SNP G -> A AC=1;AN=200;BQB=0.660879;DP=6996;DP4=2363,4300,36,39;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.0740423;MQB=0.803746;MQSB=1.12286e-14;RPB=0.874655;SGB=180.585;VDB=0.0854036;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C727|1611|LOC_Os12g27490|protein_coding|CODING|LOC_Os12g27490.1|6|1) FN781-S.SNP.12:16193090 chr12:016193090 0 W/16193090-16193090 FN781-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g27510 expressed protein SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN3833-S.SNP.12:16195933 chr12:016195933 0 W/16195933-16195933 FN3833-S SNP G -> T AC=2;AN=190;BQB=0.155394;DP=2633;DP4=1328,1197,5,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.12311e-08;MQSB=0.948135;RPB=0.968335;SGB=99.1879;VDB=0.286234;EFF=INTERGENIC(MODIFIER||||||||||1) FN752-S.SNP.12:16229522 chr12:016229522 0 W/16229522-16229522 FN752-S Single Base Substitution C-T INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2116-S.SNP.12:16230328 chr12:016230328 0 W/16230328-16230328 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.0823809;DP=2687;DP4=1695,932,16,1;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0360997;MQB=0.042713;MQSB=0.349911;RPB=0.798288;SGB=-37.2282;VDB=0.554656;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.12:16232356 chr12:016232356 0 W/16232356-16232356 FN2531-S SNP C -> T AC=1;AN=198;BQB=0.593146;DP=4378;DP4=2431,1754,11,14;HOB=5.10152e-05;ICB=0.000102546;MQ=11;MQ0F=0.587711;MQB=0.141099;MQSB=0;RPB=0.629818;SGB=109.285;VDB=0.815683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1084-S.SNP.12:16232617 chr12:016232617 0 W/16232617-16232617 FN1084-S Single Base Substitution G-A INTERGENIC HET SNo: 967, Mutant_ID: FN1084-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN3412-S.SNP.12:16249774 chr12:016249774 0 W/16249774-16249774 FN3412-S SNP G -> A AC=1;AN=184;BQB=0.901368;DP=3093;DP4=1692,1277,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.72214e-08;MQSB=0.839;RPB=0.998789;SGB=15.7097;VDB=0.0424114;EFF=INTRON(MODIFIER||||192|LOC_Os12g27610|protein_coding|CODING|LOC_Os12g27610.1|2|1) FN1222-S.SNP.12:16250365 chr12:016250365 0 W/16250365-16250365 FN1222-S Single Base Substitution G-C INTRON HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN-104.SNP.12:16252154 chr12:016252154 0 W/16252154-16252154 FN-104 Single Base Substitution C-A INTERGENIC HOMO SNo: 104, Mutant_ID: FN-104, Generation: M2, Mutations: 57, Genes: 19, Seed availability: Yes. FN2473.SNP.12:16252297 chr12:016252297 0 W/16252297-16252297 FN2473 SNP G -> A AC=1;AN=200;BQB=0.975932;DP=3831;DP4=1690,1896,5,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13956e-07;MQSB=0.343202;RPB=0.514284;SGB=33.0593;VDB=0.281616;EFF=INTERGENIC(MODIFIER||||||||||1) FN1028-S.SNP.12:16255156 chr12:016255156 0 W/16255156-16255156 FN1028-S Single Base Substitution T-C INTERGENIC HET SNo: 924, Mutant_ID: FN1028-S, Generation: M2, Mutations: 82, Genes: 12, Seed availability: Yes. FN774-S.SNP.12:16256624 chr12:016256624 0 W/16256624-16256624 FN774-S Single Base Substitution A-G INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN1371-S.SNP.12:16259786 chr12:016259786 0 W/16259786-16259786 FN1371-S Single Base Substitution T-C INTERGENIC HET SNo: 1159, Mutant_ID: FN1371-S, Generation: M2, Mutations: 89, Genes: 49, Seed availability: Yes. FN795-S.SNP.12:16259911 chr12:016259911 0 W/16259911-16259911 FN795-S Single Base Substitution T-A INTERGENIC HOMO SNo: 715, Mutant_ID: FN795-S, Generation: M2, Mutations: 57, Genes: 30, Seed availability: Yes. FN1338-S.SNP.12:16261393 chr12:016261393 0 W/16261393-16261393 FN1338-S Single Base Substitution C-G INTERGENIC HOMO SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN1243-S.SNP.12:16273716 chr12:016273716 0 W/16273716-16273716 FN1243-S Single Base Substitution C-A INTRON HET SNo: 1065, Mutant_ID: FN1243-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN-338.SNP.12:16276007 chr12:016276007 0 W/16276007-16276007 FN-338 Single Base Substitution A-G INTERGENIC HOMO SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN-45.SNP.12:16278656 chr12:016278656 0 W/16278656-16278656 FN-45 Single Base Substitution G-A INTRON Homo SNo: 45, Mutant_ID: FN-45, Generation: M2, Mutations: 30, Genes: 47, Seed availability: Yes. FN2398.SNP.12:16279402 chr12:016279402 0 W/16279402-16279402 FN2398 SNP T -> C AC=1;AN=200;BQB=0.969777;DP=4532;DP4=2179,2003,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.8065e-12;MQSB=0.725763;RPB=0.819152;SGB=45.1159;VDB=0.274991;EFF=INTRON(MODIFIER||||164|LOC_Os12g27650|protein_coding|CODING|LOC_Os12g27650.1|1|1) FN2305.SNP.12:16280475 chr12:016280475 0 W/16280475-16280475 FN2305 SNP G -> T AC=1;AN=192;BQB=0.922329;DP=5220;DP4=2498,2438,17,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.93446e-15;MQSB=0.899365;RPB=0.996595;SGB=49.4287;VDB=0.653606;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.12:16280821 chr12:016280821 0 W/16280821-16280821 FN1460-S Single Base Substitution G-T INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN1536-S.SNP.12:16280865 chr12:016280865 0 W/16280865-16280865 FN1536-S Single Base Substitution T-C INTERGENIC HET SNo: 1286, Mutant_ID: FN1536-S, Generation: M2, Mutations: 98, Genes: 31, Seed availability: No. FN725-S.SNP.12:16283391 chr12:016283391 0 W/16283391-16283391 FN725-S Single Base Substitution C-T INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN3490-S.SNP.12:16284317 chr12:016284317 0 W/16284317-16284317 FN3490-S SNP C -> T AC=1;AN=184;BQB=0.599125;DP=2687;DP4=1183,1391,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.68791e-06;MQSB=0.984164;RPB=0.589674;SGB=3.75875;VDB=0.271244;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.12:16286729 chr12:016286729 0 W/16286729-16286729 W360-2S-2 Single Base Substitution G-A INTERGENIC HET SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN1008-S.SNP.12:16289819 chr12:016289819 0 W/16289819-16289819 FN1008-S Single Base Substitution C-A INTERGENIC HET SNo: 909, Mutant_ID: FN1008-S, Generation: M2, Mutations: 64, Genes: 172, Seed availability: Yes. FN4155-S.SNP.12:16295200 chr12:016295200 0 W/16295200-16295200 FN4155-S SNP T -> C AC=1;AN=170;BQB=0.864899;DP=2677;DP4=1167,1415,6,5;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0119537;MQB=0.29868;MQSB=0;RPB=0.969958;SGB=27.9928;VDB=0.973021;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.12:16297555 chr12:016297555 0 W/16297555-16297555 FN3819-S SNP G -> T AC=1;AN=190;BQB=0.986922;DP=2449;DP4=1118,1231,5,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.178032;MQB=0.454941;MQSB=0.0589972;RPB=0.699131;SGB=58.2031;VDB=0.0777559;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.12:16299036 chr12:016299036 0 W/16299036-16299036 FN3859-S SNP A -> T AC=1;AN=158;BQB=0.973288;DP=2375;DP4=1142,1099,5,7;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0.0185263;MQB=0.0110864;MQSB=7.90134e-07;RPB=0.0432199;SGB=30.704;VDB=0.166322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3487-S.SNP.12:16302243 chr12:016302243 0 W/16302243-16302243 FN3487-S SNP C -> T AC=2;AN=184;BQB=0.999459;DP=2306;DP4=1083,1104,18,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.87675e-18;MQSB=0.99966;RPB=0.617961;SGB=99.14;VDB=0.550327;EFF=INTERGENIC(MODIFIER||||||||||1) FN2686-S.SNP.12:16303474 chr12:016303474 0 W/16303474-16303474 FN2686-S SNP G -> C AC=1;AN=200;BQB=0.549114;DP=4478;DP4=2079,2146,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18724e-08;MQSB=0.932804;RPB=0.555877;SGB=19.0642;VDB=0.443538;EFF=INTERGENIC(MODIFIER||||||||||1) FN415-S.SNP.12:16309391 chr12:016309391 0 W/16309391-16309391 FN415-S Single Base Substitution C-T INTERGENIC HOMO SNo: 414, Mutant_ID: FN415-S, Generation: M2, Mutations: 41, Genes: 10, Seed availability: Yes. FN3815-S.SNP.12:16312683 chr12:016312683 0 W/16312683-16312683 FN3815-S SNP A -> T AC=1;AN=190;BQB=0.92938;DP=2883;DP4=1210,1560,5,3;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.00104058;MQB=0.000496184;MQSB=0.72476;RPB=0.538634;SGB=18.3316;VDB=0.870259;EFF=INTERGENIC(MODIFIER||||||||||1) FN924-S.SNP.12:16315406 chr12:016315406 0 W/16315406-16315406 FN924-S Single Base Substitution G-A INTERGENIC HET SNo: 830, Mutant_ID: FN924-S, Generation: M2, Mutations: 76, Genes: 40, Seed availability: Yes. FN789-S.SNP.12:16318076 chr12:016318076 0 W/16318076-16318076 FN789-S Single Base Substitution A-C INTERGENIC HET SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2621-S.SNP.12:16320869 chr12:016320869 0 W/16320869-16320869 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.835517;DP=5274;DP4=2309,2720,14,20;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00113766;MQB=2.28856e-05;MQSB=3.91705e-07;RPB=0.929882;SGB=35.1726;VDB=0.517683;EFF=INTERGENIC(MODIFIER||||||||||1) FN-166.SNP.12:16320948 chr12:016320948 0 W/16320948-16320948 FN-166 Single Base Substitution G-C INTERGENIC HET SNo: 166, Mutant_ID: FN-166, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN2730-S.SNP.12:16322867 chr12:016322867 0 W/16322867-16322867 FN2730-S SNP G -> A AC=1;AN=200;BQB=0.883419;DP=5292;DP4=2432,2523,4,9;HOB=5e-05;ICB=0.0001005;MQ=19;MQ0F=0.352797;MQB=0.0625064;MQSB=0;RPB=0.453272;SGB=19.0642;VDB=0.755921;EFF=INTERGENIC(MODIFIER||||||||||1) FN2562-S.SNP.12:16324591 chr12:016324591 0 W/16324591-16324591 FN2562-S SNP T -> A AC=1;AN=198;BQB=0.781613;DP=4266;DP4=1928,2107,17,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.67179e-16;MQSB=0.854267;RPB=0.800197;SGB=115.647;VDB=0.316254;EFF=INTERGENIC(MODIFIER||||||||||1) W360-2S-2.SNP.12:16324907 chr12:016324907 0 W/16324907-16324907 W360-2S-2 Single Base Substitution G-A INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN3762-S.SNP.12:16326200 chr12:016326200 0 W/16326200-16326200 FN3762-S SNP T -> A AC=2;AN=190;BQB=0.997897;DP=2848;DP4=1288,1415,6,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.00105337;MQB=2.86817e-10;MQSB=0.180115;RPB=0.538366;SGB=80.9724;VDB=0.329064;EFF=INTERGENIC(MODIFIER||||||||||1) FN2723-S.SNP.12:16327320 chr12:016327320 0 W/16327320-16327320 FN2723-S SNP A -> G AC=1;AN=200;BQB=0.00906263;DP=2994;DP4=762,1913,7,16;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00233801;MQB=1.91289e-12;MQSB=0.93325;RPB=0.38611;SGB=-230.886;VDB=0.665494;EFF=INTERGENIC(MODIFIER||||||||||1) FN2791-S.SNP.12:16328138 chr12:016328138 0 W/16328138-16328138 FN2791-S SNP C -> A AC=1;AN=198;BQB=0.545759;DP=3536;DP4=1566,1775,1,11;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0127262;MQB=0.188841;MQSB=2.46553e-06;RPB=0.401554;SGB=49.5489;VDB=0.353483;EFF=INTERGENIC(MODIFIER||||||||||1) FN1047-S.SNP.12:16330400 chr12:016330400 0 W/16330400-16330400 FN1047-S Single Base Substitution T-G INTRON HOMO SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN1170-S.SNP.12:16331703 chr12:016331703 0 W/16331703-16331703 FN1170-S Single Base Substitution G-C SYNONYMOUS_CODING HET SNo: 1015, Mutant_ID: FN1170-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN1717-S.SNP.12:16333744 chr12:016333744 0 W/16333744-16333744 FN1717-S SNP G -> A AC=2;AN=188;BQB=0.583562;DP=2780;DP4=1593,1119,29,13;HOB=0.0210502;ICB=0.494738;MQ=36;MQ0F=0.0165468;MQB=0.0468814;MQSB=0.000515941;RPB=0.876956;SGB=45.6639;VDB=0.51409;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L107|838|LOC_Os12g27700|protein_coding|CODING|LOC_Os12g27700.1|1|1) FN4144-S.SNP.12:16335473 chr12:016335473 0 W/16335473-16335473 FN4144-S SNP T -> A AC=1;AN=170;BQB=0.93143;DP=2606;DP4=1198,1306,7,1;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.66562e-05;MQSB=0.916993;RPB=0.295311;SGB=30.1021;VDB=0.158094;EFF=INTRON(MODIFIER||||838|LOC_Os12g27700|protein_coding|CODING|LOC_Os12g27700.1|4|1) FN872-S.SNP.12:16335674 chr12:016335674 0 W/16335674-16335674 FN872-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3373-S.SNP.12:16336103 chr12:016336103 0 W/16336103-16336103 FN3373-S SNP G -> A AC=1;AN=184;BQB=0.972747;DP=2738;DP4=1336,1327,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00036523;MQB=1.88455e-05;MQSB=0.775934;RPB=0.730516;SGB=30.6558;VDB=0.639818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E741K|838|LOC_Os12g27700|protein_coding|CODING|LOC_Os12g27700.1|7|1) FN2612-S.SNP.12:16343765 chr12:016343765 0 W/16343765-16343765 FN2612-S SNP C -> T AC=2;AN=198;BQB=0.820707;DP=4289;DP4=2051,1959,20,24;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=3.18556e-16;MQSB=0.383123;RPB=0.660975;SGB=196.593;VDB=0.498769;EFF=INTERGENIC(MODIFIER||||||||||1) FN975-S.SNP.12:16345352 chr12:016345352 0 W/16345352-16345352 FN975-S Single Base Substitution G-A INTERGENIC HET SNo: 879, Mutant_ID: FN975-S, Generation: M2, Mutations: 64, Genes: 11, Seed availability: Yes. FN1499-S.SNP.12:16346209 chr12:016346209 0 W/16346209-16346209 FN1499-S Single Base Substitution A-G INTERGENIC HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2267-S.SNP.12:16347874 chr12:016347874 0 W/16347874-16347874 FN2267-S SNP G -> T AC=1;AN=190;BQB=0.0912268;DP=5221;DP4=2383,2419,10,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.72377e-09;MQSB=0.968235;RPB=0.365682;SGB=46.7622;VDB=0.707417;EFF=INTERGENIC(MODIFIER||||||||||1) FN1318-S.SNP.12:16350069 chr12:016350069 0 W/16350069-16350069 FN1318-S Single Base Substitution C-T INTERGENIC HET SNo: 1121, Mutant_ID: FN1318-S, Generation: M2, Mutations: 75, Genes: 75, Seed availability: Yes. FN3740-S.SNP.12:16351059 chr12:016351059 0 W/16351059-16351059 FN3740-S SNP C -> T AC=2;AN=190;BQB=0.992274;DP=2726;DP4=1241,1378,10,14;HOB=0.020831;ICB=0.494793;MQ=41;MQ0F=0.0146735;MQB=0.149958;MQSB=7.07089e-06;RPB=0.665979;SGB=75.1932;VDB=0.309312;EFF=INTERGENIC(MODIFIER||||||||||1) W7-1-1.SNP.12:16357041 chr12:016357041 0 W/16357041-16357041 W7-1-1 Single Base Substitution A-G INTERGENIC HET SNo: 1476, Mutant_ID: W7-1-1, Generation: M2, Mutations: 54, Genes: 9, Seed availability: Yes. FN971-S.SNP.12:16370279 chr12:016370279 0 W/16370279-16370279 FN971-S Single Base Substitution G-A INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN-151.SNP.12:16371819 chr12:016371819 0 W/16371819-16371819 FN-151 Single Base Substitution T-A INTRON HOMO SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN2172-S.SNP.12:16373487 chr12:016373487 0 W/16373487-16373487 FN2172-S SNP C -> A AC=1;AN=168;BQB=0.0196757;DP=3821;DP4=2019,1763,21,10;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.0978801;MQB=0.617149;MQSB=0;RPB=0.962511;SGB=-45.1967;VDB=0.924278;EFF=UTR_3_PRIME(MODIFIER||91||537|LOC_Os12g27770|protein_coding|CODING|LOC_Os12g27770.1|10|1) FN1682-S.SNP.12:16374022 chr12:016374022 0 W/16374022-16374022 FN1682-S SNP A -> T AC=1;AN=188;BQB=0.992861;DP=4198;DP4=2217,1941,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.75959e-12;MQSB=0.986714;RPB=0.959731;SGB=51.5091;VDB=0.545809;EFF=INTERGENIC(MODIFIER||||||||||1) FN229-S.SNP.12:16375691 chr12:016375691 0 W/16375691-16375691 FN229-S Single Base Substitution C-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN229-S.SNP.12:16375692 chr12:016375692 0 W/16375692-16375692 FN229-S Single Base Substitution C-T INTERGENIC HOMO SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN2182-S.SNP.12:16379135 chr12:016379135 0 W/16379135-16379135 FN2182-S SNP A -> T AC=2;AN=190;BQB=0.37563;DP=5259;DP4=2443,2477,37,23;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0517209;MQB=1.04613e-17;MQSB=0.0960729;RPB=0.417809;SGB=267.681;VDB=0.145294;EFF=INTRON(MODIFIER||||1097|LOC_Os12g27780|protein_coding|CODING|LOC_Os12g27780.1|3|1) FN868-S.SNP.12:16383877 chr12:016383877 0 W/16383877-16383877 FN868-S Single Base Substitution G-A INTRON HOMO SNo: 774, Mutant_ID: FN868-S, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN427-S.SNP.12:16386232 chr12:016386232 0 W/16386232-16386232 FN427-S Single Base Substitution C-T INTERGENIC HET SNo: 426, Mutant_ID: FN427-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN581-S.SNP.12:16389943 chr12:016389943 0 W/16389943-16389943 FN581-S Single Base Substitution G-A INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN1279-S.SNP.12:16390619 chr12:016390619 0 W/16390619-16390619 FN1279-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1749-S.SNP.12:16390686 chr12:016390686 0 W/16390686-16390686 FN1749-S SNP G -> A AC=2;AN=188;BQB=0.779732;DP=3652;DP4=2156,1443,20,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.68804e-23;MQSB=0.830489;RPB=0.985562;SGB=42.5773;VDB=0.500204;EFF=INTERGENIC(MODIFIER||||||||||1) FN1749-S.SNP.12:16390687 chr12:016390687 0 W/16390687-16390687 FN1749-S SNP G -> A AC=2;AN=188;BQB=0.158889;DP=3637;DP4=2130,1447,24,21;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.79203e-19;MQSB=0.85381;RPB=0.937359;SGB=-48.7822;VDB=0.549852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.12:16391110 chr12:016391110 0 W/16391110-16391110 FN2408 SNP C -> G AC=1;AN=200;BQB=0.689954;DP=4676;DP4=2258,2181,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.39563e-06;MQSB=0.981565;RPB=0.47668;SGB=33.0593;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN3850-S.SNP.12:16399957 chr12:016399957 0 W/16399957-16399957 FN3850-S SNP T -> G AC=1;AN=158;BQB=0.956985;DP=2448;DP4=1179,1166,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.62429e-05;MQSB=0.801727;RPB=0.803817;SGB=20.5959;VDB=0.48031;EFF=INTRON(MODIFIER||||349|LOC_Os12g27830|protein_coding|CODING|LOC_Os12g27830.1|5|1) FN2719-S.SNP.12:16401920 chr12:016401920 0 W/16401920-16401920 FN2719-S SNP A -> C AC=1;AN=200;BQB=0.887211;DP=4719;DP4=2311,2190,7,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.03018e-08;MQSB=0.980745;RPB=0.856967;SGB=54.2646;VDB=0.0990048;EFF=INTERGENIC(MODIFIER||||||||||1) FN848-S.SNP.12:16403512 chr12:016403512 0 W/16403512-16403512 FN848-S Single Base Substitution C-T INTERGENIC HET SNo: 754, Mutant_ID: FN848-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN-397.SNP.12:16407654 chr12:016407654 0 W/16407654-16407654 FN-397 Single Base Substitution G-T INTERGENIC HET SNo: 383, Mutant_ID: FN-397, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN2109-S.SNP.12:16413982 chr12:016413982 0 W/16413982-16413982 FN2109-S SNP A -> T AC=1;AN=168;BQB=0.326138;DP=3994;DP4=2205,1740,18,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.30304e-12;MQSB=0.999907;RPB=0.432653;SGB=-79.0524;VDB=0.209278;EFF=INTERGENIC(MODIFIER||||||||||1) FN-111.SNP.12:16420799 chr12:016420799 0 W/16420799-16420799 FN-111 Single Base Substitution G-T INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN1400-S.SNP.12:16420866 chr12:016420866 0 W/16420866-16420866 FN1400-S Single Base Substitution G-A INTERGENIC HET SNo: 1179, Mutant_ID: FN1400-S, Generation: M2, Mutations: 58, Genes: 26, Seed availability: Yes. FN590-S.SNP.12:16423269 chr12:016423269 0 W/16423269-16423269 FN590-S Single Base Substitution C-T INTRON HET SNo: 575, Mutant_ID: FN590-S, Generation: M2, Mutations: 50, Genes: 9, Seed availability: Yes. FN4116-S.SNP.12:16432877 chr12:016432877 0 W/16432877-16432877 FN4116-S SNP C -> T AC=1;AN=182;BQB=0.9962;DP=3371;DP4=1574,1707,21,19;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0.0272916;MQB=1.25814e-20;MQSB=0.000705592;RPB=0.243261;SGB=-314.633;VDB=0.000145074;EFF=SYNONYMOUS_CODING(LOW|SILENT|ctG/ctA|L640|1480|LOC_Os12g27870|protein_coding|CODING|LOC_Os12g27870.1|1|1) FN-237.SNP.12:16435300 chr12:016435300 0 W/16435300-16435300 FN-237 Single Base Substitution A-G INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN3549-S.SNP.12:16437560 chr12:016437560 0 W/16437560-16437560 FN3549-S SNP T -> A AC=1;AN=188;BQB=0.32284;DP=3097;DP4=1312,1348,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=31;MQ0F=0.144656;MQB=0.956838;MQSB=6.1671e-25;RPB=0.669511;SGB=-107.522;VDB=0.276968;EFF=INTERGENIC(MODIFIER||||||||||1) FN-115.SNP.12:16440150 chr12:016440150 0 W/16440150-16440150 FN-115 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g27880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 115, Mutant_ID: FN-115, Generation: M2, Mutations: 52, Genes: 16, Seed availability: Yes. FN1307-S.SNP.12:16440150 chr12:016440150 0 W/16440150-16440150 FN1307-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g27880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1113, Mutant_ID: FN1307-S, Generation: M2, Mutations: 52, Genes: 10, Seed availability: Yes. FN-31.SNP.12:16443751 chr12:016443751 0 W/16443751-16443751 FN-31 Single Base Substitution C-T INTRON HET SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN-225.SNP.12:16443819 chr12:016443819 0 W/16443819-16443819 FN-225 Single Base Substitution C-A INTRON HET SNo: 224, Mutant_ID: FN-225, Generation: M2, Mutations: 87, Genes: 13, Seed availability: Yes. FN3468-S.SNP.12:16445768 chr12:016445768 0 W/16445768-16445768 FN3468-S SNP G -> C AC=1;AN=184;BQB=0.827883;DP=3509;DP4=1307,1999,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000284981;MQB=0.000103225;MQSB=0.194047;RPB=0.939059;SGB=39.699;VDB=0.823921;EFF=INTERGENIC(MODIFIER||||||||||1) FN3539-S.SNP.12:16449322 chr12:016449322 0 W/16449322-16449322 FN3539-S SNP G -> T AC=1;AN=188;BQB=0.996168;DP=3926;DP4=2269,1532,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=38;MQ0F=0.0183393;MQB=0.347683;MQSB=2.74613e-35;RPB=0.998522;SGB=25.3545;VDB=0.481016;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.12:16453929 chr12:016453929 0 W/16453929-16453929 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.675861;DP=4252;DP4=1931,2074,2,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000965745;MQSB=0.155162;RPB=0.748883;SGB=22.2439;VDB=0.458922;EFF=INTERGENIC(MODIFIER||||||||||1) FN404-S.SNP.12:16456429 chr12:016456429 0 W/16456429-16456429 FN404-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g27910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN404-S.SNP.12:16456430 chr12:016456430 0 W/16456430-16456430 FN404-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g27910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN3354-S.SNP.12:16457673 chr12:016457673 0 W/16457673-16457673 FN3354-S SNP G -> C AC=1;AN=184;BQB=0.127927;DP=2794;DP4=1273,1361,8,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.00035791;MQB=1.55004e-05;MQSB=0.998383;RPB=0.252398;SGB=6.80232;VDB=0.301308;EFF=INTRON(MODIFIER||||65|LOC_Os12g27920|protein_coding|CODING|LOC_Os12g27920.1|1|1) FN2174-S.SNP.12:16461198 chr12:016461198 0 W/16461198-16461198 FN2174-S SNP C -> G AC=1;AN=168;BQB=0.151141;DP=3171;DP4=2102,1016,9,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000315358;MQB=0.000273121;MQSB=0.396625;RPB=0.25469;SGB=-17.5266;VDB=0.354017;EFF=INTERGENIC(MODIFIER||||||||||1) FN2653-S.SNP.12:16464443 chr12:016464443 0 W/16464443-16464443 FN2653-S SNP C -> A AC=1;AN=200;BQB=0.980855;DP=5032;DP4=2646,2089,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9314e-13;MQSB=0.98828;RPB=0.945377;SGB=79.9264;VDB=0.993655;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.12:16465713 chr12:016465713 0 W/16465713-16465713 FN-211 Single Base Substitution C-T INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3859-S.SNP.12:16470179 chr12:016470179 0 W/16470179-16470179 FN3859-S SNP T -> C AC=1;AN=158;BQB=0.327099;DP=2816;DP4=1356,1350,11,2;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000300935;MQSB=0.999399;RPB=0.893061;SGB=51.4366;VDB=0.821212;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.12:16480088 chr12:016480088 0 W/16480088-16480088 FN2789-S SNP G -> A AC=2;AN=188;BQB=0.746861;DP=4173;DP4=1775,2060,24,20;HOB=0.0210502;ICB=0.494738;MQ=35;MQ0F=0.119578;MQB=0.994159;MQSB=2.8925e-31;RPB=0.866357;SGB=-143.538;VDB=0.843193;EFF=INTERGENIC(MODIFIER||||||||||1) FN3775-S.SNP.12:16482486 chr12:016482486 0 W/16482486-16482486 FN3775-S SNP G -> A AC=2;AN=190;BQB=0.122425;DP=3279;DP4=1711,1409,24,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.43393e-15;MQSB=0.99255;RPB=0.225963;SGB=44.5119;VDB=0.667889;EFF=SPLICE_SITE_DONOR(HIGH||||140|LOC_Os12g27950|protein_coding|CODING|LOC_Os12g27950.1|1|1),INTRON(MODIFIER||||140|LOC_Os12g27950|protein_coding|CODING|LOC_Os12g27950.1|1|1);LOF=(LOC_Os12g27950|LOC_Os12g27950|1|1.00) FN2281.SNP.12:16483493 chr12:016483493 0 W/16483493-16483493 FN2281 SNP G -> A AC=1;AN=192;BQB=0.515878;DP=5065;DP4=2422,2386,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000197433;MQB=5.75598e-15;MQSB=0.866867;RPB=0.996367;SGB=51.9931;VDB=0.482219;EFF=INTERGENIC(MODIFIER||||||||||1) FN4272-S.SNP.12:16486103 chr12:016486103 0 W/16486103-16486103 FN4272-S SNP A -> T AC=1;AN=170;BQB=0.773539;DP=2491;DP4=1138,1192,15,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.56081e-14;MQSB=0.900397;RPB=0.655738;SGB=49.1957;VDB=0.495434;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.12:16490991 chr12:016490991 0 W/16490991-16490991 FN2645-S SNP G -> T AC=1;AN=200;BQB=0.485055;DP=4594;DP4=2230,2128,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.86498e-11;MQSB=0.907132;RPB=0.992718;SGB=34.6953;VDB=0.0824872;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.12:16494423 chr12:016494423 0 W/16494423-16494423 FN1279-S Single Base Substitution C-T INTERGENIC HET SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN993-S.SNP.12:16499222 chr12:016499222 0 W/16499222-16499222 FN993-S Single Base Substitution T-C INTERGENIC HET SNo: 896, Mutant_ID: FN993-S, Generation: M2, Mutations: 66, Genes: 45, Seed availability: Yes. FN2329.SNP.12:16499311 chr12:016499311 0 W/16499311-16499311 FN2329 SNP C -> T AC=1;AN=192;BQB=0.248344;DP=5011;DP4=2313,2218,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.3474e-12;MQSB=0.620798;RPB=0.846415;SGB=-71.6791;VDB=0.964223;EFF=INTERGENIC(MODIFIER||||||||||1) FN2084-S.SNP.12:16504527 chr12:016504527 0 W/16504527-16504527 FN2084-S SNP C -> T AC=1;AN=168;BQB=0.00675775;DP=2169;DP4=1079,1015,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000461042;MQB=7.29581e-05;MQSB=0.946398;RPB=0.994794;SGB=-61.7914;VDB=0.572957;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P111|419|LOC_Os12g27994|protein_coding|CODING|LOC_Os12g27994.1|1|1),INTRON(MODIFIER||||372|LOC_Os12g27994|protein_coding|CODING|LOC_Os12g27994.2|1|1) FN670-S.SNP.12:16510423 chr12:016510423 0 W/16510423-16510423 FN670-S Single Base Substitution C-T INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN2577-S.SNP.12:16518732 chr12:016518732 0 W/16518732-16518732 FN2577-S SNP A -> G AC=2;AN=198;BQB=0.846879;DP=4235;DP4=2152,1743,19,8;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.00244e-16;MQSB=0.752266;RPB=0.672767;SGB=118.476;VDB=0.674613;EFF=INTERGENIC(MODIFIER||||||||||1) FN2313.SNP.12:16518793 chr12:016518793 0 W/16518793-16518793 FN2313 SNP G -> T AC=1;AN=192;BQB=0.879957;DP=4552;DP4=2120,2144,13,17;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0;MQB=4.76436e-14;MQSB=0.133269;RPB=0.158358;SGB=-41.4269;VDB=0.934165;EFF=INTERGENIC(MODIFIER||||||||||1) FN2244-S.SNP.12:16522070 chr12:016522070 0 W/16522070-16522070 FN2244-S SNP C -> T AC=1;AN=190;BQB=0.930543;DP=4589;DP4=2072,2186,12,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.55283e-11;MQSB=0.880624;RPB=0.404158;SGB=-11.5603;VDB=0.13045;EFF=INTERGENIC(MODIFIER||||||||||1) FN3626-S.SNP.12:16522270 chr12:016522270 0 W/16522270-16522270 FN3626-S SNP C -> T AC=1;AN=190;BQB=0.591222;DP=2691;DP4=1367,1254,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.26787e-09;MQSB=0.973894;RPB=0.296364;SGB=31.3213;VDB=0.0560125;EFF=INTERGENIC(MODIFIER||||||||||1) FN1356-S.SNP.12:16523856 chr12:016523856 0 W/16523856-16523856 FN1356-S Single Base Substitution A-T INTERGENIC HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN539-S.SNP.12:16527532 chr12:016527532 0 W/16527532-16527532 FN539-S Single Base Substitution G-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN539-S.SNP.12:16527533 chr12:016527533 0 W/16527533-16527533 FN539-S Single Base Substitution A-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN3901-S.SNP.12:16529156 chr12:016529156 0 W/16529156-16529156 FN3901-S SNP G -> A AC=1;AN=158;BQB=0.998796;DP=2414;DP4=1106,1232,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.66163e-07;MQSB=0.944461;RPB=0.801786;SGB=38.3284;VDB=0.512083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M156I|314|LOC_Os12g28020|protein_coding|CODING|LOC_Os12g28020.1|2|1) FN3901-S.SNP.12:16529157 chr12:016529157 0 W/16529157-16529157 FN3901-S SNP T -> A AC=1;AN=158;BQB=0.729397;DP=2414;DP4=1088,1222,4,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.45633e-07;MQSB=0.922116;RPB=0.865149;SGB=11.9715;VDB=0.228818;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tta/Ata|L157I|314|LOC_Os12g28020|protein_coding|CODING|LOC_Os12g28020.1|2|1) FN2310.SNP.12:16534900 chr12:016534900 0 W/16534900-16534900 FN2310 SNP T -> C AC=1;AN=192;BQB=0.926971;DP=4842;DP4=1927,2461,12,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206526;MQB=4.80637e-17;MQSB=0.99685;RPB=0.621555;SGB=96.8096;VDB=0.0752031;EFF=INTERGENIC(MODIFIER||||||||||1) FN3502-S.SNP.12:16535509 chr12:016535509 0 W/16535509-16535509 FN3502-S SNP C -> T AC=2;AN=188;BQB=0.581545;DP=2597;DP4=1120,1339,16,12;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.33424e-14;MQSB=0.662629;RPB=0.836523;SGB=56.5957;VDB=0.920209;EFF=INTERGENIC(MODIFIER||||||||||1) FN884-S.SNP.12:16542401 chr12:016542401 0 W/16542401-16542401 FN884-S Single Base Substitution C-T INTERGENIC HET SNo: 790, Mutant_ID: FN884-S, Generation: M2, Mutations: 55, Genes: 38, Seed availability: Yes. FN3561-S.SNP.12:16543656 chr12:016543656 0 W/16543656-16543656 FN3561-S SNP G -> T AC=2;AN=188;BQB=0.946273;DP=2615;DP4=1212,1229,26,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.41101e-22;MQSB=0.835907;RPB=0.721335;SGB=154.316;VDB=0.959414;EFF=INTRON(MODIFIER||||279|LOC_Os12g28050|protein_coding|CODING|LOC_Os12g28050.1|1|1) FN2467.SNP.12:16544003 chr12:016544003 0 W/16544003-16544003 FN2467 SNP G -> T AC=1;AN=200;BQB=0.894215;DP=4544;DP4=2147,2074,11,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.44555e-13;MQSB=0.989857;RPB=0.111517;SGB=42.5108;VDB=0.245702;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gAa|A262E|279|LOC_Os12g28050|protein_coding|CODING|LOC_Os12g28050.1|1|1) FN726-S.SNP.12:16546853 chr12:016546853 0 W/16546853-16546853 FN726-S Single Base Substitution C-A INTERGENIC HET SNo: 651, Mutant_ID: FN726-S, Generation: M2, Mutations: 63, Genes: 21, Seed availability: Yes. FN628-S.SNP.12:16548552 chr12:016548552 0 W/16548552-16548552 FN628-S Single Base Substitution T-C INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN1750-S.SNP.12:16549891 chr12:016549891 0 W/16549891-16549891 FN1750-S SNP A -> G AC=2;AN=188;BQB=0.403253;DP=2166;DP4=921,1149,17,20;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.35891e-17;MQSB=0.999722;RPB=0.824816;SGB=21.1699;VDB=0.0406791;EFF=INTERGENIC(MODIFIER||||||||||1) FN630-S.SNP.12:16553557 chr12:016553557 0 W/16553557-16553557 FN630-S Single Base Substitution T-A INTERGENIC HET SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1403-S.SNP.12:16557131 chr12:016557131 0 W/16557131-16557131 FN1403-S Single Base Substitution G-A INTERGENIC HET SNo: 1182, Mutant_ID: FN1403-S, Generation: M2, Mutations: 74, Genes: 41, Seed availability: Yes. FN891-S.SNP.12:16557844 chr12:016557844 0 W/16557844-16557844 FN891-S Single Base Substitution T-C INTERGENIC HOMO SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN3292-S.SNP.12:16558058 chr12:016558058 0 W/16558058-16558058 FN3292-S SNP T -> C AC=1;AN=184;BQB=0.981569;DP=3686;DP4=1902,1646,2,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000249899;MQSB=0.72376;RPB=0.785141;SGB=30.6558;VDB=0.387294;EFF=INTERGENIC(MODIFIER||||||||||1) FN3700-S.SNP.12:16559104 chr12:016559104 0 W/16559104-16559104 FN3700-S SNP A -> G AC=1;AN=190;BQB=0.381285;DP=2669;DP4=1360,1205,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.07713e-07;MQSB=0.966916;RPB=0.707164;SGB=36.1006;VDB=0.743141;EFF=INTERGENIC(MODIFIER||||||||||1) FN1429-S.SNP.12:16560760 chr12:016560760 0 W/16560760-16560760 FN1429-S Single Base Substitution T-A INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN1429-S.SNP.12:16560767 chr12:016560767 0 W/16560767-16560767 FN1429-S Single Base Substitution T-G INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN369-S.SNP.12:16566157 chr12:016566157 0 W/16566157-16566157 FN369-S Single Base Substitution T-A INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN1237-S.SNP.12:16567305 chr12:016567305 0 W/16567305-16567305 FN1237-S Single Base Substitution A-T INTERGENIC HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN-151.SNP.12:16569602 chr12:016569602 0 W/16569602-16569602 FN-151 Single Base Substitution A-G INTERGENIC HOMO SNo: 151, Mutant_ID: FN-151, Generation: M2, Mutations: 53, Genes: 84, Seed availability: Yes. FN1109-S.SNP.12:16571279 chr12:016571279 0 W/16571279-16571279 FN1109-S Single Base Substitution G-A INTERGENIC HOMO SNo: 982, Mutant_ID: FN1109-S, Generation: M2, Mutations: 74, Genes: 25, Seed availability: Yes. FN2592-S.SNP.12:16572456 chr12:016572456 0 W/16572456-16572456 FN2592-S SNP G -> A AC=1;AN=198;BQB=0.979643;DP=4095;DP4=1966,1928,13,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.88026e-10;MQSB=0.974847;RPB=0.648162;SGB=15.7299;VDB=0.145589;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R614C|786|LOC_Os12g28070|protein_coding|CODING|LOC_Os12g28070.1|2|1) FN-167.SNP.12:16572466 chr12:016572466 0 W/16572466-16572466 FN-167 Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN3716-S.SNP.12:16574376 chr12:016574376 0 W/16574376-16574376 FN3716-S SNP A -> T AC=1;AN=190;BQB=0.814542;DP=3081;DP4=1735,1288,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.12499e-06;MQSB=0.998679;RPB=0.932727;SGB=36.1006;VDB=0.844193;EFF=INTRON(MODIFIER||||786|LOC_Os12g28070|protein_coding|CODING|LOC_Os12g28070.1|1|1) FN-211.SNP.12:16575849 chr12:016575849 0 W/16575849-16575849 FN-211 Single Base Substitution T-A INTRON HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-41.SNP.12:16577148 chr12:016577148 0 W/16577148-16577148 FN-41 Single Base Substitution T-C INTRON Homo SNo: 41, Mutant_ID: FN-41, Generation: M2, Mutations: 41, Genes: 121, Seed availability: Yes. FN3820-S.SNP.12:16580810 chr12:016580810 0 W/16580810-16580810 FN3820-S SNP T -> C AC=1;AN=190;BQB=0.995025;DP=2523;DP4=1241,1182,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.07563e-05;MQSB=0.92325;RPB=0.494757;SGB=35.4339;VDB=0.322751;EFF=INTERGENIC(MODIFIER||||||||||1) FN3536-S.SNP.12:16581497 chr12:016581497 0 W/16581497-16581497 FN3536-S SNP A -> G AC=1;AN=188;BQB=0.62686;DP=3454;DP4=1394,1773,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.93362e-14;MQSB=0.988641;RPB=0.763058;SGB=78.5038;VDB=0.803587;EFF=INTERGENIC(MODIFIER||||||||||1) FN933-S.SNP.12:16584709 chr12:016584709 0 W/16584709-16584709 FN933-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g28090 expressed protein SNo: 839, Mutant_ID: FN933-S, Generation: M2, Mutations: 63, Genes: 59, Seed availability: Yes. FN3345-S.SNP.12:16593979 chr12:016593979 0 W/16593979-16593979 FN3345-S SNP C -> T AC=2;AN=184;BQB=0.932432;DP=2879;DP4=1238,1511,11,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.24865e-18;MQSB=0.999139;RPB=0.312089;SGB=130.135;VDB=0.639176;EFF=INTRON(MODIFIER||||947|LOC_Os12g28100|protein_coding|CODING|LOC_Os12g28100.1|2|1) FN679-S.SNP.12:16595360 chr12:016595360 0 W/16595360-16595360 FN679-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 612, Mutant_ID: FN679-S, Generation: M2, Mutations: 51, Genes: 15, Seed availability: Yes. FN1499-S.SNP.12:16649708 chr12:016649708 0 W/16649708-16649708 FN1499-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN728-S.SNP.12:16655006 chr12:016655006 0 W/16655006-16655006 FN728-S Single Base Substitution C-T INTERGENIC HET SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN2232-S.SNP.12:16662062 chr12:016662062 0 W/16662062-16662062 FN2232-S SNP C -> T AC=1;AN=190;BQB=0.987617;DP=4604;DP4=2016,2306,4,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.24794e-11;MQSB=0.996897;RPB=0.947995;SGB=80.9724;VDB=0.319821;EFF=INTERGENIC(MODIFIER||||||||||1) FN2184-S.SNP.12:16663888 chr12:016663888 0 W/16663888-16663888 FN2184-S SNP C -> T AC=1;AN=190;BQB=0.360166;DP=4972;DP4=2417,2231,9,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.09567e-09;MQSB=0.781208;RPB=0.852366;SGB=50.3161;VDB=0.230463;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.12:16666044 chr12:016666044 0 W/16666044-16666044 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.793392;DP=2496;DP4=1429,986,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00320513;MQB=6.44363e-07;MQSB=0.508431;RPB=0.771766;SGB=43.4296;VDB=0.435867;EFF=INTERGENIC(MODIFIER||||||||||1) FN4300-S.SNP.12:16666045 chr12:016666045 0 W/16666045-16666045 FN4300-S SNP C -> T AC=1;AN=170;BQB=0.996244;DP=2505;DP4=1445,981,8,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.00319361;MQB=6.74167e-07;MQSB=0.482409;RPB=0.721341;SGB=43.4296;VDB=0.440607;EFF=INTERGENIC(MODIFIER||||||||||1) FN1241-S.SNP.12:16666314 chr12:016666314 0 W/16666314-16666314 FN1241-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1064, Mutant_ID: FN1241-S, Generation: M2, Mutations: 52, Genes: 15, Seed availability: Yes. FN-120.SNP.12:16669453 chr12:016669453 0 W/16669453-16669453 FN-120 Single Base Substitution T-C INTRON HOMO SNo: 120, Mutant_ID: FN-120, Generation: M2, Mutations: 47, Genes: 6, Seed availability: Yes. FN432-S.SNP.12:16669608 chr12:016669608 0 W/16669608-16669608 FN432-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN2302.SNP.12:16672473 chr12:016672473 0 W/16672473-16672473 FN2302 SNP G -> T AC=2;AN=192;BQB=0.756153;DP=4966;DP4=2306,2317,30,33;HOB=0.0206163;ICB=0.494846;MQ=42;MQ0F=0.0352396;MQB=0.0269143;MQSB=9.91259e-18;RPB=0.890527;SGB=79.3148;VDB=0.0235551;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Tcg|A1210S|1699|LOC_Os12g28220|protein_coding|CODING|LOC_Os12g28220.1|5|1) FN4143-S.SNP.12:16674832 chr12:016674832 0 W/16674832-16674832 FN4143-S SNP C -> T AC=1;AN=170;BQB=0.976706;DP=2481;DP4=1400,1007,4,4;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.000806127;MQB=0.062544;MQSB=0.00113555;RPB=0.754188;SGB=30.1021;VDB=0.961302;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cTc|P2L|50|LOC_Os12g28230|protein_coding|CODING|LOC_Os12g28230.1|1|1) FN2785-S.SNP.12:16675240 chr12:016675240 0 W/16675240-16675240 FN2785-S SNP G -> T AC=1;AN=198;BQB=0.922115;DP=4431;DP4=2448,1678,17,13;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0207628;MQB=0.591366;MQSB=0.379589;RPB=0.975517;SGB=97.671;VDB=0.194332;EFF=INTRON(MODIFIER||||50|LOC_Os12g28230|protein_coding|CODING|LOC_Os12g28230.1|1|1) FN4106-S.SNP.12:16691069 chr12:016691069 0 W/16691069-16691069 FN4106-S SNP T -> C AC=1;AN=182;BQB=0.924929;DP=2670;DP4=1458,1149,10,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.57281e-10;MQSB=0.996609;RPB=0.74924;SGB=75.6874;VDB=0.897428;EFF=UTR_5_PRIME(MODIFIER||1967||519|LOC_Os12g28250|protein_coding|CODING|LOC_Os12g28250.1|1|1) FN620-S.SNP.12:16695549 chr12:016695549 0 W/16695549-16695549 FN620-S Single Base Substitution A-G INTERGENIC HET SNo: 585, Mutant_ID: FN620-S, Generation: M2, Mutations: 92, Genes: 81, Seed availability: Yes. FN2083-S.SNP.12:16696532 chr12:016696532 0 W/16696532-16696532 FN2083-S SNP T -> C AC=2;AN=168;BQB=0.979019;DP=4348;DP4=1971,2292,27,33;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.20855e-35;MQSB=0.999996;RPB=0.955671;SGB=-61.7031;VDB=0.741763;EFF=INTERGENIC(MODIFIER||||||||||1) FN3824-S.SNP.12:16698644 chr12:016698644 0 W/16698644-16698644 FN3824-S SNP A -> G AC=2;AN=190;BQB=0.942354;DP=2517;DP4=1275,1090,23,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.5696e-22;MQSB=0.99156;RPB=0.998921;SGB=162.942;VDB=0.16401;EFF=INTERGENIC(MODIFIER||||||||||1) FN1285-S.SNP.12:16703003 chr12:016703003 0 W/16703003-16703003 FN1285-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g28260 cyclic nucleotide-gated ion channel, putative, expressed SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN1440-S.SNP.12:16706539 chr12:016706539 0 W/16706539-16706539 FN1440-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN3880-S.SNP.12:16712073 chr12:016712073 0 W/16712073-16712073 FN3880-S SNP T -> G AC=1;AN=158;BQB=0.942896;DP=2819;DP4=1453,1267,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.46568e-11;MQSB=0.903701;RPB=0.698163;SGB=77.6532;VDB=0.367644;EFF=INTRON(MODIFIER||||471|LOC_Os12g28270|protein_coding|CODING|LOC_Os12g28270.1|2|1),INTRON(MODIFIER||||471|LOC_Os12g28270|protein_coding|CODING|LOC_Os12g28270.2|2|1) FN760-S.SNP.12:16712311 chr12:016712311 0 W/16712311-16712311 FN760-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g28270 amidohydrolase, putative, expressed SNo: 682, Mutant_ID: FN760-S, Generation: M2, Mutations: 62, Genes: 36, Seed availability: Yes. FN3371-S.SNP.12:16713361 chr12:016713361 0 W/16713361-16713361 FN3371-S SNP C -> A AC=1;AN=184;BQB=0.902902;DP=2882;DP4=1586,1203,10,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000346981;MQB=5.54406e-08;MQSB=0.695164;RPB=0.861624;SGB=66.8296;VDB=0.877825;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.12:16716546 chr12:016716546 0 W/16716546-16716546 FN2709-S SNP C -> A AC=1;AN=200;BQB=0.140718;DP=5111;DP4=2488,2375,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.30568e-09;MQSB=0.999873;RPB=0.609454;SGB=47.4799;VDB=0.252016;EFF=INTERGENIC(MODIFIER||||||||||1) FN-311.SNP.12:16719292 chr12:016719292 0 W/16719292-16719292 FN-311 Single Base Substitution G-C INTERGENIC HOMO SNo: 306, Mutant_ID: FN-311, Generation: M2, Mutations: 44, Genes: 16, Seed availability: Yes. FN3942-S.SNP.12:16724269 chr12:016724269 0 W/16724269-16724269 FN3942-S SNP G -> A AC=2;AN=168;BQB=0.746067;DP=2855;DP4=1277,1464,12,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.1987e-17;MQSB=0.927747;RPB=0.897667;SGB=68.3702;VDB=0.569938;EFF=INTERGENIC(MODIFIER||||||||||1) FN2331.SNP.12:16724688 chr12:016724688 0 W/16724688-16724688 FN2331 SNP G -> A AC=2;AN=192;BQB=0.997687;DP=4499;DP4=2197,1986,27,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000444543;MQB=1.38189e-23;MQSB=0.707479;RPB=0.999543;SGB=1.03308;VDB=0.744722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3380-S.SNP.12:16725106 chr12:016725106 0 W/16725106-16725106 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.992395;DP=3552;DP4=2095,1358,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.170608;MQB=0.221;MQSB=0;RPB=0.997555;SGB=53.2642;VDB=0.999357;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.12:16727249 chr12:016727249 0 W/16727249-16727249 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.998795;DP=2859;DP4=1257,1465,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00104932;MQB=1.42865e-06;MQSB=0.504296;RPB=0.964081;SGB=32.2261;VDB=0.342279;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.12:16730521 chr12:016730521 0 W/16730521-16730521 FN-195 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g28290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN1685-S.SNP.12:16730583 chr12:016730583 0 W/16730583-16730583 FN1685-S SNP C -> T AC=1;AN=188;BQB=0.497367;DP=2058;DP4=847,1167,7,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.54732e-08;MQSB=0.412048;RPB=0.295629;SGB=53.7007;VDB=0.698113;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G568E|1316|LOC_Os12g28290|protein_coding|CODING|LOC_Os12g28290.1|4|1) W721-2-1.SNP.12:16735281 chr12:016735281 0 W/16735281-16735281 W721-2-1 Single Base Substitution A-T INTERGENIC HOMO SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN3492-S.SNP.12:16737762 chr12:016737762 0 W/16737762-16737762 FN3492-S SNP G -> A AC=1;AN=184;BQB=0.954262;DP=3050;DP4=1917,991,12,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67218e-08;MQSB=0.331104;RPB=0.915797;SGB=66.8296;VDB=0.156207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.12:16737844 chr12:016737844 0 W/16737844-16737844 FN1521-S Single Base Substitution G-T INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN1481-S.SNP.12:16744886 chr12:016744886 0 W/16744886-16744886 FN1481-S Single Base Substitution A-G INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1600-S.SNP.12:16750359 chr12:016750359 0 W/16750359-16750359 FN1600-S Single Base Substitution A-T INTERGENIC Homo SNo: 1323, Mutant_ID: FN1600-S, Generation: M2, Mutations: 83, Genes: 32, Seed availability: Yes. FN1407-S.SNP.12:16751100 chr12:016751100 0 W/16751100-16751100 FN1407-S Single Base Substitution G-A INTERGENIC HET SNo: 1185, Mutant_ID: FN1407-S, Generation: M2, Mutations: 71, Genes: 24, Seed availability: Yes. FN1429-S.SNP.12:16753491 chr12:016753491 0 W/16753491-16753491 FN1429-S Single Base Substitution C-T INTERGENIC HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN-186.SNP.12:16754004 chr12:016754004 0 W/16754004-16754004 FN-186 Single Base Substitution C-T INTERGENIC HET SNo: 186, Mutant_ID: FN-186, Generation: M2, Mutations: 42, Genes: 5, Seed availability: Yes. FN3553-S.SNP.12:16754654 chr12:016754654 0 W/16754654-16754654 FN3553-S SNP G -> T AC=1;AN=188;BQB=0.99702;DP=2780;DP4=1296,1379,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.97143e-10;MQSB=0.998305;RPB=0.169018;SGB=76.2387;VDB=0.0131189;EFF=INTERGENIC(MODIFIER||||||||||1) FN1617-S.SNP.12:16756382 chr12:016756382 0 W/16756382-16756382 FN1617-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g28330 retrotransposon protein, putative, unclassified, expressed SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN4049-S.SNP.12:16759637 chr12:016759637 0 W/16759637-16759637 FN4049-S SNP G -> A AC=1;AN=168;BQB=0.847809;DP=2828;DP4=1405,1310,6,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.28946e-06;MQSB=0.995574;RPB=0.482427;SGB=43.3113;VDB=0.390615;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P16S|721|LOC_Os12g28340|protein_coding|CODING|LOC_Os12g28340.1|1|1) FN1251-S.SNP.12:16760003 chr12:016760003 0 W/16760003-16760003 FN1251-S Single Base Substitution C-A INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN2292.SNP.12:16760176 chr12:016760176 0 W/16760176-16760176 FN2292 SNP T -> C AC=1;AN=192;BQB=0.984705;DP=5070;DP4=2348,2259,13,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.39197e-10;MQSB=0.992065;RPB=0.886704;SGB=-36.6348;VDB=0.070503;EFF=INTERGENIC(MODIFIER||||||||||1) FN3793-S.SNP.12:16769430 chr12:016769430 0 W/16769430-16769430 FN3793-S SNP A -> G AC=2;AN=190;BQB=0.715594;DP=2378;DP4=1126,1151,5,18;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0147183;MQB=0.00233378;MQSB=1.94565e-18;RPB=0.67625;SGB=16.5421;VDB=0.824283;EFF=INTERGENIC(MODIFIER||||||||||1) FN2275-S.SNP.12:16771263 chr12:016771263 0 W/16771263-16771263 FN2275-S SNP G -> C AC=2;AN=190;BQB=0.624483;DP=4111;DP4=1840,1883,40,44;HOB=0.020831;ICB=0.494793;MQ=35;MQ0F=0.101922;MQB=0.12438;MQSB=0;RPB=0.314762;SGB=278.342;VDB=0.37145;EFF=INTERGENIC(MODIFIER||||||||||1) FN3814-S.SNP.12:16773654 chr12:016773654 0 W/16773654-16773654 FN3814-S SNP A -> T AC=1;AN=190;BQB=0.0924268;DP=3581;DP4=1693,1684,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0298799;MQB=0.793757;MQSB=2.09052e-05;RPB=0.663113;SGB=-13.7759;VDB=0.41498;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aTt|N684I|2030|LOC_Os12g28360|protein_coding|CODING|LOC_Os12g28360.1|1|1) FN2342.SNP.12:16776114 chr12:016776114 0 W/16776114-16776114 FN2342 SNP A -> C AC=1;AN=192;BQB=0.557932;DP=5254;DP4=2631,2089,15,10;HOB=5.42535e-05;ICB=0.000109072;MQ=42;MQ0F=0.0314046;MQB=0.00704995;MQSB=2.61007e-21;RPB=0.557359;SGB=-98.3669;VDB=0.637442;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAc/tCc|Y1483S|2030|LOC_Os12g28360|protein_coding|CODING|LOC_Os12g28360.1|2|1) FN_786-4-1.SNP.12:16790299 chr12:016790299 0 W/16790299-16790299 FN_786-4-1 Single Base Substitution G-A Homo SNo: 1483, Mutant_ID: FN_786-4-1, Generation: M3, Mutations: 64, Genes: 8, Seed availability: Yes. FN445-S.SNP.12:16794221 chr12:016794221 0 W/16794221-16794221 FN445-S Single Base Substitution C-T INTERGENIC HET SNo: 444, Mutant_ID: FN445-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN2219-S.SNP.12:16794517 chr12:016794517 0 W/16794517-16794517 FN2219-S SNP G -> A AC=1;AN=190;BQB=0.74732;DP=4205;DP4=2059,1829,6,10;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0979786;MQB=0.418087;MQSB=0;RPB=0.100349;SGB=67.3108;VDB=0.234292;EFF=INTERGENIC(MODIFIER||||||||||1) FN754-S.SNP.12:16817055 chr12:016817055 0 W/16817055-16817055 FN754-S Single Base Substitution C-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN3677-S.SNP.12:16827933 chr12:016827933 0 W/16827933-16827933 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.827791;DP=2746;DP4=1124,1510,4,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.21218e-07;MQSB=0.696526;RPB=0.953782;SGB=53.8699;VDB=0.525684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R602C|1825|LOC_Os12g28470|protein_coding|CODING|LOC_Os12g28470.1|4|1) FN3309-S.SNP.12:16828677 chr12:016828677 0 W/16828677-16828677 FN3309-S SNP G -> A AC=1;AN=184;BQB=0.864877;DP=3078;DP4=1398,1608,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.00500343;MQSB=0.00462701;RPB=0.28693;SGB=75.8731;VDB=0.0650137;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q354*|1825|LOC_Os12g28470|protein_coding|CODING|LOC_Os12g28470.1|4|1) FN3659-S.SNP.12:16834899 chr12:016834899 0 W/16834899-16834899 FN3659-S SNP G -> A AC=1;AN=190;BQB=0.923511;DP=2696;DP4=1245,1329,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0196588;MQB=0.704598;MQSB=0.001261;RPB=0.884316;SGB=35.4339;VDB=0.738888;EFF=SYNONYMOUS_CODING(LOW|SILENT|taC/taT|Y1373|1777|LOC_Os12g28490|protein_coding|CODING|LOC_Os12g28490.1|4|1) FN4117-S.SNP.12:16848498 chr12:016848498 0 W/16848498-16848498 FN4117-S SNP C -> A AC=2;AN=182;BQB=0.71631;DP=3179;DP4=1428,1655,11,13;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.01258e-12;MQSB=0.995697;RPB=0.72842;SGB=102.753;VDB=0.368749;EFF=INTERGENIC(MODIFIER||||||||||1) FN850-S.SNP.12:16848498 chr12:016848498 0 W/16848498-16848498 FN850-S Single Base Substitution C-A INTERGENIC HOMO SNo: 756, Mutant_ID: FN850-S, Generation: M2, Mutations: 57, Genes: 72, Seed availability: Yes. FN2102-S.SNP.12:16851019 chr12:016851019 0 W/16851019-16851019 FN2102-S SNP C -> T AC=1;AN=168;BQB=0.055581;DP=3064;DP4=1870,1151,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.48849e-08;MQSB=0.984434;RPB=0.566648;SGB=-16.2342;VDB=0.578992;EFF=INTERGENIC(MODIFIER||||||||||1) FN3362-S.SNP.12:16857732 chr12:016857732 0 W/16857732-16857732 FN3362-S SNP C -> T AC=1;AN=184;BQB=0.961288;DP=3131;DP4=1278,1758,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.88989e-07;MQSB=0.898063;RPB=0.783927;SGB=53.2642;VDB=0.294263;EFF=INTERGENIC(MODIFIER||||||||||1) FN-70.SNP.12:16862391 chr12:016862391 0 W/16862391-16862391 FN-70 Single Base Substitution A-T INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1339-S.SNP.12:16865620 chr12:016865620 0 W/16865620-16865620 FN1339-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2311.SNP.12:16865620 chr12:016865620 0 W/16865620-16865620 FN2311 SNP C -> A AC=1;AN=192;BQB=0.812172;DP=4937;DP4=2097,2428,17,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.98281e-18;MQSB=0.8917;RPB=0.122774;SGB=-5.17475;VDB=0.933963;EFF=INTERGENIC(MODIFIER||||||||||1) FN440-S.SNP.12:16865744 chr12:016865744 0 W/16865744-16865744 FN440-S Single Base Substitution G-C INTERGENIC HET SNo: 439, Mutant_ID: FN440-S, Generation: M2, Mutations: 51, Genes: 46, Seed availability: Yes. FN1441-S.SNP.12:16868641 chr12:016868641 0 W/16868641-16868641 FN1441-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN950-S.SNP.12:16871098 chr12:016871098 0 W/16871098-16871098 FN950-S Single Base Substitution C-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2234-S.SNP.12:16872203 chr12:016872203 0 W/16872203-16872203 FN2234-S SNP C -> T AC=1;AN=190;BQB=0.186152;DP=4841;DP4=2167,2328,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.51757e-06;MQSB=0.920863;RPB=0.541153;SGB=-60.3192;VDB=0.937175;EFF=INTERGENIC(MODIFIER||||||||||1) FN3911-S.SNP.12:16875212 chr12:016875212 0 W/16875212-16875212 FN3911-S SNP A -> G AC=1;AN=158;BQB=0.977041;DP=1913;DP4=1090,704,6,2;HOB=8.01154e-05;ICB=0.000161245;MQ=27;MQ0F=0.0418191;MQB=0.309824;MQSB=0;RPB=0.997888;SGB=17.2267;VDB=0.72859;EFF=INTERGENIC(MODIFIER||||||||||1) FN860-S.SNP.12:16886250 chr12:016886250 0 W/16886250-16886250 FN860-S Single Base Substitution T-A INTERGENIC HET SNo: 766, Mutant_ID: FN860-S, Generation: M2, Mutations: 56, Genes: 7, Seed availability: Yes. FN770-S.SNP.12:16886459 chr12:016886459 0 W/16886459-16886459 FN770-S Single Base Substitution C-A INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN2754-S.SNP.12:16888102 chr12:016888102 0 W/16888102-16888102 FN2754-S SNP T -> C AC=1;AN=200;BQB=0.930274;DP=4332;DP4=1918,2152,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=0.000138319;MQSB=0.833573;RPB=0.996546;SGB=-3.35138;VDB=0.720461;EFF=INTERGENIC(MODIFIER||||||||||1) FN452-S.SNP.12:16889012 chr12:016889012 0 W/16889012-16889012 FN452-S Single Base Substitution G-T INTERGENIC HET SNo: 451, Mutant_ID: FN452-S, Generation: M2, Mutations: 39, Genes: 21, Seed availability: Yes. FN2178-S.SNP.12:16899302 chr12:016899302 0 W/16899302-16899302 FN2178-S SNP A -> G AC=1;AN=168;BQB=0.890425;DP=3871;DP4=1780,2050,10,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.98888e-13;MQSB=0.594444;RPB=0.878833;SGB=36.7696;VDB=0.419105;EFF=INTERGENIC(MODIFIER||||||||||1) FN2456.SNP.12:16899725 chr12:016899725 0 W/16899725-16899725 FN2456 SNP T -> C AC=1;AN=200;BQB=0.134435;DP=4460;DP4=2392,1879,4,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000224215;MQB=1.91572e-05;MQSB=0.966143;RPB=0.861391;SGB=18.639;VDB=0.469089;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.12:16909518 chr12:016909518 0 W/16909518-16909518 FN2333 SNP A -> T AC=1;AN=192;BQB=0.0384096;DP=4491;DP4=2041,2098,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.04192e-10;MQSB=0.884414;RPB=0.429728;SGB=-11.3826;VDB=0.652422;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aTg|K128M|528|LOC_Os12g28590|protein_coding|CODING|LOC_Os12g28590.1|1|1) FN2375.SNP.12:16915260 chr12:016915260 0 W/16915260-16915260 FN2375 SNP A -> T AC=1;AN=192;BQB=0.998359;DP=4972;DP4=2554,2050,16,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000201126;MQB=9.49548e-11;MQSB=0.149819;RPB=0.918449;SGB=21.4339;VDB=0.229809;EFF=INTERGENIC(MODIFIER||||||||||1) FN3384-S.SNP.12:16916186 chr12:016916186 0 W/16916186-16916186 FN3384-S SNP T -> C AC=1;AN=184;BQB=0.782394;DP=3421;DP4=1495,1794,4,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.59729e-07;MQSB=0.842829;RPB=0.874893;SGB=71.3514;VDB=0.413837;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.12:16916317 chr12:016916317 0 W/16916317-16916317 FN2489 SNP T -> A AC=2;AN=200;BQB=0.970635;DP=4444;DP4=2282,1905,25,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000225023;MQB=5.11579e-25;MQSB=0.229102;RPB=0.999834;SGB=134.004;VDB=0.479149;EFF=INTERGENIC(MODIFIER||||||||||1) FN2489.SNP.12:16916318 chr12:016916318 0 W/16916318-16916318 FN2489 SNP A -> G AC=2;AN=200;BQB=0.92826;DP=4439;DP4=2116,1895,24,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000225276;MQB=2.16168e-24;MQSB=0.261135;RPB=0.905857;SGB=173.999;VDB=0.468468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.12:16916489 chr12:016916489 0 W/16916489-16916489 FN1339-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN3423-S.SNP.12:16925490 chr12:016925490 0 W/16925490-16925490 FN3423-S SNP T -> A AC=1;AN=184;BQB=0.798664;DP=3737;DP4=1790,1810,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.10261e-05;MQSB=0.99918;RPB=0.999956;SGB=39.699;VDB=0.57381;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggA|G394|678|LOC_Os12g28620|protein_coding|CODING|LOC_Os12g28620.1|5|1) FN1025-S.SNP.12:16929318 chr12:016929318 0 W/16929318-16929318 FN1025-S Single Base Substitution C-T INTERGENIC HET SNo: 921, Mutant_ID: FN1025-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN1195-S.SNP.12:16938955 chr12:016938955 0 W/16938955-16938955 FN1195-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN1210-S.SNP.12:16938955 chr12:016938955 0 W/16938955-16938955 FN1210-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN1448-S.SNP.12:16938955 chr12:016938955 0 W/16938955-16938955 FN1448-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN624-S.SNP.12:16938955 chr12:016938955 0 W/16938955-16938955 FN624-S Single Base Substitution T-C INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN911-S.SNP.12:16938955 chr12:016938955 0 W/16938955-16938955 FN911-S Single Base Substitution T-C INTERGENIC HOMO SNo: 817, Mutant_ID: FN911-S, Generation: M2, Mutations: 88, Genes: 56, Seed availability: Yes. FN3819-S.SNP.12:16949004 chr12:016949004 0 W/16949004-16949004 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.865887;DP=2501;DP4=1218,1208,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.0187925;MQB=0.00916706;MQSB=0.950213;RPB=0.749966;SGB=53.6492;VDB=0.990452;EFF=INTERGENIC(MODIFIER||||||||||1) FN1299-S.SNP.12:16953281 chr12:016953281 0 W/16953281-16953281 FN1299-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g28690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2483.SNP.12:16966714 chr12:016966714 0 W/16966714-16966714 FN2483 SNP C -> T AC=1;AN=200;BQB=0.95312;DP=4178;DP4=1986,1876,14,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.96693e-10;MQSB=0.798431;RPB=0.817042;SGB=72.7161;VDB=0.639907;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R148H|183|LOC_Os12g28720|protein_coding|CODING|LOC_Os12g28720.1|5|1) FN1031-S.SNP.12:16969469 chr12:016969469 0 W/16969469-16969469 FN1031-S Single Base Substitution T-C INTRON HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN1376-S.SNP.12:16973688 chr12:016973688 0 W/16973688-16973688 FN1376-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1164, Mutant_ID: FN1376-S, Generation: M2, Mutations: 40, Genes: 113, Seed availability: No. FN4137-S.SNP.12:16988150 chr12:016988150 0 W/16988150-16988150 FN4137-S SNP A -> G AC=1;AN=170;BQB=0.947663;DP=2391;DP4=1250,1027,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.99325e-06;MQSB=0.990553;RPB=0.866258;SGB=34.5445;VDB=0.441508;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.12:16992700 chr12:016992700 0 W/16992700-16992700 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.00105965;DP=2493;DP4=1906,538,15,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000838438;MQSB=0.123742;RPB=0.0184994;SGB=-104.065;VDB=0.0730913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2084-S.SNP.12:16993099 chr12:016993099 0 W/16993099-16993099 FN2084-S SNP T -> C AC=1;AN=168;BQB=0.642366;DP=3576;DP4=1587,1956,10,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.49295e-11;MQSB=0.964067;RPB=0.617946;SGB=-41.7816;VDB=0.601883;EFF=INTERGENIC(MODIFIER||||||||||1) FN770-S.SNP.12:16994694 chr12:016994694 0 W/16994694-16994694 FN770-S Single Base Substitution A-G INTERGENIC HET SNo: 691, Mutant_ID: FN770-S, Generation: M2, Mutations: 77, Genes: 54, Seed availability: Yes. FN3432-S.SNP.12:16995202 chr12:016995202 0 W/16995202-16995202 FN3432-S SNP C -> T AC=1;AN=184;BQB=0.353467;DP=2603;DP4=1295,1171,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.0971e-08;MQSB=0.37102;RPB=0.821287;SGB=8.32411;VDB=0.673997;EFF=INTERGENIC(MODIFIER||||||||||1) FN564-S.SNP.12:16998554 chr12:016998554 0 W/16998554-16998554 FN564-S Single Base Substitution C-T INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN3418-S.SNP.12:16999033 chr12:016999033 0 W/16999033-16999033 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.634354;DP=1548;DP4=693,789,5,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000517497;MQSB=0.573578;RPB=0.688323;SGB=5.62295;VDB=0.375922;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.12:17000924 chr12:017000924 0 W/17000924-17000924 FN2477 SNP G -> T AC=1;AN=200;BQB=0.394562;DP=4744;DP4=2317,2115,6,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000210793;MQB=1.70787e-07;MQSB=0.930083;RPB=0.79803;SGB=4.67442;VDB=0.309666;EFF=INTERGENIC(MODIFIER||||||||||1) FN1240-S.SNP.12:17006221 chr12:017006221 0 W/17006221-17006221 FN1240-S Single Base Substitution T-G INTERGENIC HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN1288-S.SNP.12:17014451 chr12:017014451 0 W/17014451-17014451 FN1288-S Single Base Substitution T-C INTERGENIC HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. W426-1-1.SNP.12:17015268 chr12:017015268 0 W/17015268-17015268 W426-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. W246-5-1.SNP.12:17015720 chr12:017015720 0 W/17015720-17015720 W246-5-1 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g28780 expressed protein SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN-275.SNP.12:17029000 chr12:017029000 0 W/17029000-17029000 FN-275 Single Base Substitution G-A INTERGENIC HOMO SNo: 272, Mutant_ID: FN-275, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN2708-S.SNP.12:17032986 chr12:017032986 0 W/17032986-17032986 FN2708-S SNP G -> T AC=1;AN=200;BQB=0.108232;DP=5067;DP4=2379,2167,13,9;HOB=5e-05;ICB=0.0001005;MQ=15;MQ0F=0.0848628;MQB=0.431833;MQSB=0;RPB=0.862189;SGB=69.1109;VDB=0.108926;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P522H|1117|LOC_Os12g28810|protein_coding|CODING|LOC_Os12g28810.1|3|1) FN-162.SNP.12:17035098 chr12:017035098 0 W/17035098-17035098 FN-162 Single Base Substitution T-A INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-162.SNP.12:17035099 chr12:017035099 0 W/17035099-17035099 FN-162 Single Base Substitution G-T INTRON HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-66.SNP.12:17036139 chr12:017036139 0 W/17036139-17036139 FN-66 Single Base Substitution G-A INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN3956-S.SNP.12:17040752 chr12:017040752 0 W/17040752-17040752 FN3956-S SNP A -> T AC=1;AN=168;BQB=0.984734;DP=2529;DP4=1226,1220,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.00909e-11;MQSB=0.858335;RPB=0.885223;SGB=51.902;VDB=0.698113;EFF=INTERGENIC(MODIFIER||||||||||1) FN-174.SNP.12:17045109 chr12:017045109 0 W/17045109-17045109 FN-174 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 174, Mutant_ID: FN-174, Generation: M2, Mutations: 108, Genes: 22, Seed availability: Yes. FN-264.SNP.12:17045248 chr12:017045248 0 W/17045248-17045248 FN-264 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g28830 retrotransposon protein, putative, unclassified, expressed SNo: 263, Mutant_ID: FN-264, Generation: M2, Mutations: 62, Genes: 26, Seed availability: Yes. FN2735-S.SNP.12:17047000 chr12:017047000 0 W/17047000-17047000 FN2735-S SNP C -> G AC=1;AN=200;BQB=0.930191;DP=4541;DP4=2198,2109,15,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.66119e-13;MQSB=0.808876;RPB=0.965125;SGB=69.1109;VDB=0.959412;EFF=INTRON(MODIFIER||||830|LOC_Os12g28830|protein_coding|CODING|LOC_Os12g28830.1|5|1) FN4139-S.SNP.12:17048046 chr12:017048046 0 W/17048046-17048046 FN4139-S SNP G -> A AC=1;AN=170;BQB=0.854658;DP=2518;DP4=1245,1177,8,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.30311e-12;MQSB=0.917435;RPB=0.378067;SGB=83.4133;VDB=0.534092;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R696Q|830|LOC_Os12g28830|protein_coding|CODING|LOC_Os12g28830.1|6|1) FN2652-S.SNP.12:17049208 chr12:017049208 0 W/17049208-17049208 FN2652-S SNP A -> C AC=1;AN=200;BQB=0.352627;DP=5005;DP4=2903,1865,14,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.35091e-11;MQSB=0.820272;RPB=0.960313;SGB=52.9314;VDB=0.4234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3859-S.SNP.12:17052174 chr12:017052174 0 W/17052174-17052174 FN3859-S SNP T -> C AC=1;AN=158;BQB=0.898806;DP=2585;DP4=1028,1453,5,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.58314e-06;MQSB=0.890505;RPB=0.9629;SGB=33.9591;VDB=0.000792781;EFF=INTERGENIC(MODIFIER||||||||||1) FN318-S.SNP.12:17052427 chr12:017052427 0 W/17052427-17052427 FN318-S Single Base Substitution T-A INTERGENIC HET SNo: 313, Mutant_ID: FN318-S, Generation: M2, Mutations: 85, Genes: 83, Seed availability: Yes. FN2794-S.SNP.12:17052854 chr12:017052854 0 W/17052854-17052854 FN2794-S SNP T -> C AC=1;AN=186;BQB=0.998211;DP=3808;DP4=1862,1752,10,11;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=9.13036e-11;MQSB=0.999922;RPB=0.710777;SGB=65.3149;VDB=0.820274;EFF=SYNONYMOUS_CODING(LOW|SILENT|acA/acG|T998|1006|LOC_Os12g28850|protein_coding|CODING|LOC_Os12g28850.1|6|1) FN3418-S.SNP.12:17053268 chr12:017053268 0 W/17053268-17053268 FN3418-S SNP C -> T AC=1;AN=184;BQB=0.920502;DP=4768;DP4=2385,2274,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.77534e-14;MQSB=0.938806;RPB=0.998879;SGB=93.9603;VDB=0.746641;EFF=INTRON(MODIFIER||||1006|LOC_Os12g28850|protein_coding|CODING|LOC_Os12g28850.1|5|1) FN630-S.SNP.12:17054416 chr12:017054416 0 W/17054416-17054416 FN630-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g28850 retrotransposon protein, putative, unclassified, expressed SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN630-S.SNP.12:17054417 chr12:017054417 0 W/17054417-17054417 FN630-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g28850 retrotransposon protein, putative, unclassified, expressed SNo: 595, Mutant_ID: FN630-S, Generation: M2, Mutations: 50, Genes: 35, Seed availability: Yes. FN1214-S.SNP.12:17054721 chr12:017054721 0 W/17054721-17054721 FN1214-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g28850 retrotransposon protein, putative, unclassified, expressed SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN569-S.SNP.12:17055134 chr12:017055134 0 W/17055134-17055134 FN569-S Single Base Substitution G-A INTRON HET SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN1240-S.SNP.12:17055172 chr12:017055172 0 W/17055172-17055172 FN1240-S Single Base Substitution G-T INTRON HET SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN3752-S.SNP.12:17055603 chr12:017055603 0 W/17055603-17055603 FN3752-S SNP T -> C AC=1;AN=190;BQB=0.840635;DP=3042;DP4=1645,1292,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.03346e-12;MQSB=0.956306;RPB=0.642017;SGB=80.9724;VDB=0.595505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E268G|1006|LOC_Os12g28850|protein_coding|CODING|LOC_Os12g28850.1|2|1) FN3830-S.SNP.12:17057241 chr12:017057241 0 W/17057241-17057241 FN3830-S SNP C -> T AC=1;AN=190;BQB=0.995774;DP=3168;DP4=1524,1544,11,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.61133e-09;MQSB=0.935466;RPB=0.910299;SGB=62.7569;VDB=0.396379;EFF=INTERGENIC(MODIFIER||||||||||1) FN494-S.SNP.12:17063681 chr12:017063681 0 W/17063681-17063681 FN494-S Single Base Substitution C-T INTERGENIC HOMO SNo: 492, Mutant_ID: FN494-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: Yes. FN2259-S.SNP.12:17064097 chr12:017064097 0 W/17064097-17064097 FN2259-S SNP A -> G AC=2;AN=190;BQB=0.0806316;DP=4612;DP4=2284,1974,23,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.58585e-19;MQSB=0.644073;RPB=0.726155;SGB=-1.59056;VDB=0.569187;EFF=INTERGENIC(MODIFIER||||||||||1) FN2417.SNP.12:17075692 chr12:017075692 0 W/17075692-17075692 FN2417 SNP C -> A AC=1;AN=200;BQB=0.30157;DP=5382;DP4=2711,2338,22,24;HOB=5e-05;ICB=0.0001005;MQ=38;MQ0F=0.0315868;MQB=0.992853;MQSB=0.000129247;RPB=0.945065;SGB=206.235;VDB=0.169175;EFF=INTERGENIC(MODIFIER||||||||||1) FN1209-S.SNP.12:17081172 chr12:017081172 0 W/17081172-17081172 FN1209-S Single Base Substitution T-G INTRON HET SNo: 1038, Mutant_ID: FN1209-S, Generation: M2, Mutations: 56, Genes: 17, Seed availability: Yes. FN1525-S.SNP.12:17082217 chr12:017082217 0 W/17082217-17082217 FN1525-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g28890 retrotransposon protein, putative, unclassified, expressed SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2498.SNP.12:17082557 chr12:017082557 0 W/17082557-17082557 FN2498 SNP C -> T AC=1;AN=200;BQB=0.959354;DP=3809;DP4=1876,1727,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.25373e-08;MQSB=0.849985;RPB=0.622699;SGB=29.4849;VDB=0.553069;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atG/atA|M39I|532|LOC_Os12g28890|protein_coding|CODING|LOC_Os12g28890.1|1|1) FN3376-S.SNP.12:17083659 chr12:017083659 0 W/17083659-17083659 FN3376-S SNP T -> A AC=1;AN=184;BQB=0.716915;DP=2927;DP4=1441,1314,12,19;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.28276e-17;MQSB=0.886262;RPB=0.427902;SGB=99.14;VDB=0.297241;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.12:17088487 chr12:017088487 0 W/17088487-17088487 FN2224-S SNP A -> G AC=1;AN=190;BQB=0.360846;DP=6299;DP4=2650,3216,18,45;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0.037625;MQB=0.00012123;MQSB=0.999514;RPB=0.0366149;SGB=213.794;VDB=0.321865;EFF=INTERGENIC(MODIFIER||||||||||1) FN417-S.SNP.12:17094776 chr12:017094776 0 W/17094776-17094776 FN417-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g28920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN2129-S.SNP.12:17095009 chr12:017095009 0 W/17095009-17095009 FN2129-S SNP C -> T AC=1;AN=168;BQB=0.248321;DP=2748;DP4=1362,1314,7,13;HOB=7.08617e-05;ICB=0.000142567;MQ=43;MQ0F=0.0174672;MQB=0.0382439;MQSB=9.65291e-10;RPB=0.555884;SGB=9.91396;VDB=0.628046;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgT|R483|1803|LOC_Os12g28920|protein_coding|CODING|LOC_Os12g28920.1|3|1) FN2199-S.SNP.12:17096909 chr12:017096909 0 W/17096909-17096909 FN2199-S SNP G -> A AC=1;AN=190;BQB=0.96462;DP=6258;DP4=3431,2436,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=33;MQ0F=0.120166;MQB=0.195371;MQSB=0;RPB=0.985166;SGB=36.1006;VDB=0.251385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A1117T|1803|LOC_Os12g28920|protein_coding|CODING|LOC_Os12g28920.1|3|1) FN3676-S.SNP.12:17098207 chr12:017098207 0 W/17098207-17098207 FN3676-S SNP G -> A AC=1;AN=190;BQB=0.998697;DP=3457;DP4=1860,1486,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0954585;MQB=0.253502;MQSB=0.932766;RPB=0.710543;SGB=58.2031;VDB=0.763609;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q1549|1803|LOC_Os12g28920|protein_coding|CODING|LOC_Os12g28920.1|3|1) FN2771-S.SNP.12:17103184 chr12:017103184 0 W/17103184-17103184 FN2771-S SNP C -> T AC=1;AN=198;BQB=0.958984;DP=5013;DP4=2948,1779,17,4;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0303212;MQB=0.894513;MQSB=0.0861782;RPB=0.988841;SGB=90.9049;VDB=0.587319;EFF=INTERGENIC(MODIFIER||||||||||1) FN898-S.SNP.12:17105480 chr12:017105480 0 W/17105480-17105480 FN898-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g28930 retrotransposon protein, putative, unclassified SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3477-S.SNP.12:17108647 chr12:017108647 0 W/17108647-17108647 FN3477-S SNP C -> T AC=1;AN=184;BQB=0.352138;DP=2241;DP4=1026,1125,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00312361;MQB=0.000499884;MQSB=0.808139;RPB=0.0191319;SGB=42.7914;VDB=0.000776227;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L72|356|LOC_Os12g28930|protein_coding|CODING|LOC_Os12g28930.1|3|1) FN1458-S.SNP.12:17115324 chr12:017115324 0 W/17115324-17115324 FN1458-S Single Base Substitution G-T INTRON HET SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN3057-S.SNP.12:17123491 chr12:017123491 0 W/17123491-17123491 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.885263;DP=4048;DP4=1938,1987,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000494071;MQB=3.95522e-07;MQSB=0.992926;RPB=0.109847;SGB=53.2642;VDB=0.482286;EFF=INTERGENIC(MODIFIER||||||||||1) FN917-S.SNP.12:17123819 chr12:017123819 0 W/17123819-17123819 FN917-S Single Base Substitution G-A INTERGENIC HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN3057-S.SNP.12:17124127 chr12:017124127 0 W/17124127-17124127 FN3057-S SNP G -> T AC=1;AN=184;BQB=0.744466;DP=4002;DP4=1791,2107,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0.00174913;MQB=0.354734;MQSB=0.24491;RPB=0.803181;SGB=53.3568;VDB=0.551262;EFF=INTERGENIC(MODIFIER||||||||||1) FN1012-S.SNP.12:17125072 chr12:017125072 0 W/17125072-17125072 FN1012-S Single Base Substitution T-A INTERGENIC HET SNo: 912, Mutant_ID: FN1012-S, Generation: M2, Mutations: 71, Genes: 30, Seed availability: Yes. W450-6-1.SNP.12:17125105 chr12:017125105 0 W/17125105-17125105 W450-6-1 Single Base Substitution A-T INTERGENIC HET SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3311-S.SNP.12:17127908 chr12:017127908 0 W/17127908-17127908 FN3311-S SNP G -> A AC=1;AN=184;BQB=0.236119;DP=3219;DP4=1942,994,24,11;HOB=5.90737e-05;ICB=0.00011879;MQ=37;MQ0F=0.0472196;MQB=0.823597;MQSB=0.364082;RPB=0.609996;SGB=113.227;VDB=0.631732;EFF=INTERGENIC(MODIFIER||||||||||1) FN323-S.SNP.12:17129527 chr12:017129527 0 W/17129527-17129527 FN323-S Single Base Substitution A-C INTERGENIC HET SNo: 318, Mutant_ID: FN323-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2086-S.SNP.12:17131003 chr12:017131003 0 W/17131003-17131003 FN2086-S SNP C -> T AC=1;AN=168;BQB=0.0557093;DP=3377;DP4=1514,1812,14,17;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.105123;MQB=0.00054577;MQSB=1.62078e-15;RPB=0.0432489;SGB=-116.046;VDB=0.330818;EFF=INTERGENIC(MODIFIER||||||||||1) FN3915-S.SNP.12:17134977 chr12:017134977 0 W/17134977-17134977 FN3915-S SNP G -> T AC=2;AN=158;BQB=0.848274;DP=2483;DP4=1263,1103,15,13;HOB=0.024996;ICB=0.493752;MQ=38;MQ0F=0.0378574;MQB=0.82436;MQSB=6.73675e-12;RPB=0.99998;SGB=116.978;VDB=0.851886;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gAt|A1166D|1412|LOC_Os12g28970|protein_coding|CODING|LOC_Os12g28970.1|2|1) FN1559-S.SNP.12:17145481 chr12:017145481 0 W/17145481-17145481 FN1559-S Single Base Substitution A-C INTERGENIC HET SNo: 1303, Mutant_ID: FN1559-S, Generation: M2, Mutations: 78, Genes: 12, Seed availability: Yes. FN4145-S.SNP.12:17149081 chr12:017149081 0 W/17149081-17149081 FN4145-S SNP G -> A AC=1;AN=170;BQB=0.915543;DP=3144;DP4=1457,1593,7,5;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0413486;MQB=0.821029;MQSB=9.29482e-22;RPB=0.510962;SGB=47.8722;VDB=0.617065;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R666C|1759|LOC_Os12g28990|protein_coding|CODING|LOC_Os12g28990.1|4|1) FN-197.SNP.12:17149909 chr12:017149909 0 W/17149909-17149909 FN-197 Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 197, Mutant_ID: FN-197, Generation: M2, Mutations: 43, Genes: 64, Seed availability: Yes. FN4121-S.SNP.12:17150930 chr12:017150930 0 W/17150930-17150930 FN4121-S SNP C -> T AC=1;AN=182;BQB=0.705117;DP=3715;DP4=1752,1906,8,9;HOB=6.03792e-05;ICB=0.000121422;MQ=29;MQ0F=0.177389;MQB=0.452957;MQSB=0;RPB=0.871671;SGB=71.1765;VDB=0.956773;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D139N|1759|LOC_Os12g28990|protein_coding|CODING|LOC_Os12g28990.1|2|1) FN1413-S.SNP.12:17156610 chr12:017156610 0 W/17156610-17156610 FN1413-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g29000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1190, Mutant_ID: FN1413-S, Generation: M2, Mutations: 63, Genes: 9, Seed availability: Yes. FN2207-S.SNP.12:17160627 chr12:017160627 0 W/17160627-17160627 FN2207-S SNP C -> T AC=2;AN=190;BQB=0.236051;DP=4742;DP4=2090,2284,16,19;HOB=0.020831;ICB=0.494793;MQ=43;MQ0F=0.0506116;MQB=5.98041e-07;MQSB=0.611131;RPB=0.130245;SGB=153.834;VDB=0.8539;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.12:17169954 chr12:017169954 0 W/17169954-17169954 FN1476-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN3854-S.SNP.12:17173220 chr12:017173220 0 W/17173220-17173220 FN3854-S SNP A -> C AC=1;AN=158;BQB=0.943415;DP=2419;DP4=1114,1178,2,6;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0;MQB=0.000275544;MQSB=0.995753;RPB=0.993047;SGB=29.5899;VDB=0.07273;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aaa/Caa|K803Q|1510|LOC_Os12g29020|protein_coding|CODING|LOC_Os12g29020.1|4|1) FN1217-S.SNP.12:17174697 chr12:017174697 0 W/17174697-17174697 FN1217-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g29020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN819-S.SNP.12:17175274 chr12:017175274 0 W/17175274-17175274 FN819-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 736, Mutant_ID: FN819-S, Generation: M2, Mutations: 91, Genes: 13, Seed availability: Yes. FN2729-S.SNP.12:17178116 chr12:017178116 0 W/17178116-17178116 FN2729-S SNP G -> A AC=1;AN=200;BQB=0.884361;DP=4623;DP4=2194,2198,12,6;HOB=5e-05;ICB=0.0001005;MQ=39;MQ0F=0.0510491;MQB=0.994503;MQSB=0.000166285;RPB=0.22525;SGB=32.0901;VDB=0.138282;EFF=INTERGENIC(MODIFIER||||||||||1) FN1229-S.SNP.12:17178263 chr12:017178263 0 W/17178263-17178263 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2711-S.SNP.12:17179950 chr12:017179950 0 W/17179950-17179950 FN2711-S SNP C -> G AC=1;AN=200;BQB=0.00394083;DP=4914;DP4=2317,2352,11,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.58828e-07;MQSB=0.408384;RPB=0.244917;SGB=86.5007;VDB=0.160478;EFF=INTERGENIC(MODIFIER||||||||||1) FN1556-S.SNP.12:17190377 chr12:017190377 0 W/17190377-17190377 FN1556-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g29030 retrotransposon protein, putative, unclassified, expressed SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN890-S.SNP.12:17201164 chr12:017201164 0 W/17201164-17201164 FN890-S Single Base Substitution G-A INTERGENIC HET SNo: 796, Mutant_ID: FN890-S, Generation: M2, Mutations: 66, Genes: 94, Seed availability: Yes. FN1026-S.SNP.12:17213776 chr12:017213776 0 W/17213776-17213776 FN1026-S Single Base Substitution A-T INTRON HET SNo: 922, Mutant_ID: FN1026-S, Generation: M2, Mutations: 82, Genes: 77, Seed availability: Yes. FN705-S.SNP.12:17214516 chr12:017214516 0 W/17214516-17214516 FN705-S Single Base Substitution T-A INTRON HET SNo: 634, Mutant_ID: FN705-S, Generation: M2, Mutations: 46, Genes: 6, Seed availability: No. FN2194-S.SNP.12:17217192 chr12:017217192 0 W/17217192-17217192 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.697747;DP=4776;DP4=2322,2218,9,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.33677e-09;MQSB=0.944815;RPB=0.764654;SGB=43.2083;VDB=0.129294;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGg/aTg|R706M|2107|LOC_Os12g29070|protein_coding|CODING|LOC_Os12g29070.1|8|1) FN1554-S.SNP.12:17219219 chr12:017219219 0 W/17219219-17219219 FN1554-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g29070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1299, Mutant_ID: FN1554-S, Generation: M2, Mutations: 96, Genes: 32, Seed availability: No. FN2685-S.SNP.12:17220550 chr12:017220550 0 W/17220550-17220550 FN2685-S SNP A -> G AC=1;AN=200;BQB=0.877805;DP=5018;DP4=2445,2370,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000199283;MQB=6.94543e-14;MQSB=0.906732;RPB=0.956524;SGB=42.5108;VDB=0.651385;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tAt/tGt|Y1787C|2107|LOC_Os12g29070|protein_coding|CODING|LOC_Os12g29070.1|9|1) FN3400-S.SNP.12:17221000 chr12:017221000 0 W/17221000-17221000 FN3400-S SNP A -> G AC=1;AN=184;BQB=0.970679;DP=2917;DP4=1478,1352,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.11753e-06;MQSB=0.975752;RPB=0.998739;SGB=48.7425;VDB=0.316684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q1937R|2107|LOC_Os12g29070|protein_coding|CODING|LOC_Os12g29070.1|9|1) FN3815-S.SNP.12:17227008 chr12:017227008 0 W/17227008-17227008 FN3815-S SNP A -> G AC=1;AN=190;BQB=0.397536;DP=4621;DP4=2604,1812,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=41;MQ0F=0.0242372;MQB=0.871747;MQSB=0.856594;RPB=0.633863;SGB=-16.5452;VDB=0.730968;EFF=INTERGENIC(MODIFIER||||||||||1) FN489-S.SNP.12:17227431 chr12:017227431 0 W/17227431-17227431 FN489-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g29100 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 487, Mutant_ID: FN489-S, Generation: M2, Mutations: 63, Genes: 57, Seed availability: Yes. FN2673-S.SNP.12:17227670 chr12:017227670 0 W/17227670-17227670 FN2673-S SNP C -> A AC=1;AN=200;BQB=0.996951;DP=4217;DP4=1903,2070,7,7;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.0111454;MQB=0.165999;MQSB=2.19785e-33;RPB=0.938993;SGB=58.8698;VDB=0.189211;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R189|1521|LOC_Os12g29100|protein_coding|CODING|LOC_Os12g29100.1|1|1) FN432-S.SNP.12:17237042 chr12:017237042 0 W/17237042-17237042 FN432-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g29120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN-171.SNP.12:17238172 chr12:017238172 0 W/17238172-17238172 FN-171 Single Base Substitution C-T INTERGENIC HET SNo: 171, Mutant_ID: FN-171, Generation: M2, Mutations: 63, Genes: 27, Seed availability: Yes. FN3656-S.SNP.12:17238172 chr12:017238172 0 W/17238172-17238172 FN3656-S SNP C -> T AC=1;AN=190;BQB=0.971309;DP=2970;DP4=1381,1485,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.45721e-05;MQSB=0.966112;RPB=0.965169;SGB=39.9877;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN3372-S.SNP.12:17239702 chr12:017239702 0 W/17239702-17239702 FN3372-S SNP C -> G AC=1;AN=184;BQB=0.937782;DP=3298;DP4=1591,1583,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.38508e-06;MQSB=0.909525;RPB=0.364029;SGB=48.7425;VDB=0.757612;EFF=INTERGENIC(MODIFIER||||||||||1) FN2445.SNP.12:17241413 chr12:017241413 0 W/17241413-17241413 FN2445 SNP G -> A AC=1;AN=200;BQB=0.283757;DP=4177;DP4=1995,1934,8,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.00143644;MQB=8.36916e-08;MQSB=0.0678273;RPB=0.173485;SGB=47.4799;VDB=0.830416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2112-S.SNP.12:17256906 chr12:017256906 0 W/17256906-17256906 FN2112-S SNP C -> T AC=1;AN=168;BQB=0.958854;DP=3100;DP4=1515,1512,7,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000322581;MQB=2.65269e-12;MQSB=0.998643;RPB=0.0153594;SGB=11.3448;VDB=0.000246629;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.12:17262779 chr12:017262779 0 W/17262779-17262779 FN3639-S SNP G -> A AC=1;AN=190;BQB=0.994219;DP=2597;DP4=1358,1139,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.43755e-06;MQSB=0.956553;RPB=0.958699;SGB=25.439;VDB=0.0797975;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.12:17264304 chr12:017264304 0 W/17264304-17264304 FN1481-S Single Base Substitution G-C INTRON HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN3499-S.SNP.12:17264478 chr12:017264478 0 W/17264478-17264478 FN3499-S SNP G -> A AC=1;AN=188;BQB=0.973865;DP=2498;DP4=1360,1019,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000709811;MQSB=0.00768937;RPB=0.993305;SGB=48.979;VDB=0.248536;EFF=INTRON(MODIFIER||||790|LOC_Os12g29160|protein_coding|CODING|LOC_Os12g29160.1|1|1) FN-277.SNP.12:17264618 chr12:017264618 0 W/17264618-17264618 FN-277 Single Base Substitution C-A INTRON HET SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN3480-S.SNP.12:17273698 chr12:017273698 0 W/17273698-17273698 FN3480-S SNP C -> G AC=1;AN=184;BQB=0.702132;DP=2436;DP4=1208,1169,10,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.81635e-08;MQSB=0.86092;RPB=0.984521;SGB=62.3078;VDB=0.154463;EFF=INTERGENIC(MODIFIER||||||||||1) FN3373-S.SNP.12:17277408 chr12:017277408 0 W/17277408-17277408 FN3373-S SNP C -> T AC=1;AN=184;BQB=0.748856;DP=2311;DP4=984,1137,5,8;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.213328;MQB=0.755902;MQSB=0.244389;RPB=0.957661;SGB=18.2315;VDB=0.687739;EFF=INTERGENIC(MODIFIER||||||||||1) FN4001-S.SNP.12:17297408 chr12:017297408 0 W/17297408-17297408 FN4001-S SNP T -> G AC=1;AN=168;BQB=0.299343;DP=2311;DP4=1295,956,8,1;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.00129814;MQB=0.489295;MQSB=0;RPB=0.98737;SGB=21.0249;VDB=0.699372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2486.SNP.12:17298552 chr12:017298552 0 W/17298552-17298552 FN2486 SNP G -> T AC=1;AN=200;BQB=0.932744;DP=4540;DP4=2248,1965,11,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.18209e-08;MQSB=0.867647;RPB=0.999146;SGB=-14.3206;VDB=0.852314;EFF=INTERGENIC(MODIFIER||||||||||1) FN-51.SNP.12:17301324 chr12:017301324 0 W/17301324-17301324 FN-51 Single Base Substitution A-G INTERGENIC HOMO SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN-51.SNP.12:17301324 chr12:017301324 0 W/17301324-17301324 FN-51 Single Base Substitution A-G INTERGENIC Homo SNo: 51, Mutant_ID: FN-51, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN1415-S.SNP.12:17301843 chr12:017301843 0 W/17301843-17301843 FN1415-S Single Base Substitution G-T INTERGENIC HET SNo: 1192, Mutant_ID: FN1415-S, Generation: M2, Mutations: 93, Genes: 21, Seed availability: Yes. FN2751-S.SNP.12:17305126 chr12:017305126 0 W/17305126-17305126 FN2751-S SNP G -> A AC=1;AN=200;BQB=0.384847;DP=5014;DP4=2348,2417,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.53916e-06;MQSB=0.999998;RPB=0.755482;SGB=36.6644;VDB=0.0940961;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G3|296|LOC_Os12g29220|protein_coding|CODING|LOC_Os12g29220.1|1|1) FN1282-S.SNP.12:17309110 chr12:017309110 0 W/17309110-17309110 FN1282-S Single Base Substitution T-G INTERGENIC HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2119-S.SNP.12:17312032 chr12:017312032 0 W/17312032-17312032 FN2119-S SNP G -> A AC=2;AN=168;BQB=0.707499;DP=3153;DP4=1484,1601,16,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.31141e-21;MQSB=0.909737;RPB=0.254371;SGB=-93.1751;VDB=0.755546;EFF=INTRON(MODIFIER||||1162|LOC_Os12g29230|protein_coding|CODING|LOC_Os12g29230.1|2|1) FN4113-S.SNP.12:17312032 chr12:017312032 0 W/17312032-17312032 FN4113-S SNP G -> A AC=2;AN=182;BQB=0.601412;DP=2004;DP4=965,948,18,17;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.78791e-15;MQSB=0.739782;RPB=0.999762;SGB=147.059;VDB=0.835586;EFF=INTRON(MODIFIER||||1162|LOC_Os12g29230|protein_coding|CODING|LOC_Os12g29230.1|2|1) FN4184-S.SNP.12:17319744 chr12:017319744 0 W/17319744-17319744 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.371225;DP=2648;DP4=1141,1420,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=21;MQ0F=0.271148;MQB=0.0321013;MQSB=3.12628e-24;RPB=0.374141;SGB=61.2001;VDB=0.539005;EFF=INTERGENIC(MODIFIER||||||||||1) FN4165-S.SNP.12:17325310 chr12:017325310 0 W/17325310-17325310 FN4165-S SNP G -> A AC=1;AN=170;BQB=0.407772;DP=2551;DP4=1332,1170,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.32731e-05;MQSB=0.986135;RPB=0.0561727;SGB=38.987;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.12:17329774 chr12:017329774 0 W/17329774-17329774 FN1309-S Single Base Substitution G-A INTERGENIC HET SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2223-S.SNP.12:17333145 chr12:017333145 0 W/17333145-17333145 FN2223-S SNP A -> C AC=2;AN=190;BQB=0.999992;DP=4949;DP4=2379,2151,27,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.92814e-25;MQSB=0.983018;RPB=0.847747;SGB=156.932;VDB=0.32057;EFF=INTERGENIC(MODIFIER||||||||||1) FN-278.SNP.12:17333924 chr12:017333924 0 W/17333924-17333924 FN-278 Single Base Substitution C-T INTERGENIC HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2670-S.SNP.12:17334798 chr12:017334798 0 W/17334798-17334798 FN2670-S SNP G -> A AC=1;AN=200;BQB=0.886372;DP=4518;DP4=2223,1972,11,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000221337;MQB=2.28643e-08;MQSB=0.993381;RPB=0.940811;SGB=24.2746;VDB=0.0235832;EFF=INTERGENIC(MODIFIER||||||||||1) FN2532-S.SNP.12:17340270 chr12:017340270 0 W/17340270-17340270 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.985885;DP=4263;DP4=2082,1935,14,9;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.91012e-10;MQSB=0.997985;RPB=0.956605;SGB=44.9151;VDB=0.410735;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.12:17341258 chr12:017341258 0 W/17341258-17341258 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.942792;DP=2673;DP4=1104,1483,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.45532e-05;MQSB=0.97785;RPB=0.882077;SGB=21.6609;VDB=0.0344509;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.12:17341277 chr12:017341277 0 W/17341277-17341277 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.948659;DP=2619;DP4=1080,1445,3,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.45989e-05;MQSB=0.980139;RPB=0.858199;SGB=25.1826;VDB=0.244343;EFF=INTERGENIC(MODIFIER||||||||||1) FN1227-S.SNP.12:17353260 chr12:017353260 0 W/17353260-17353260 FN1227-S Single Base Substitution A-T INTERGENIC HET SNo: 1052, Mutant_ID: FN1227-S, Generation: M2, Mutations: 80, Genes: 235, Seed availability: Yes. FN479-S.SNP.12:17360605 chr12:017360605 0 W/17360605-17360605 FN479-S Single Base Substitution G-A INTERGENIC HOMO SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1586-S.SNP.12:17371484 chr12:017371484 0 W/17371484-17371484 FN1586-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g29310 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN1550-S.SNP.12:17378611 chr12:017378611 0 W/17378611-17378611 FN1550-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g29320 expressed protein SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN1215-S.SNP.12:17382333 chr12:017382333 0 W/17382333-17382333 FN1215-S Single Base Substitution C-T INTERGENIC HET SNo: 1044, Mutant_ID: FN1215-S, Generation: M2, Mutations: 64, Genes: 39, Seed availability: Yes. FN1353-S.SNP.12:17382407 chr12:017382407 0 W/17382407-17382407 FN1353-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1149, Mutant_ID: FN1353-S, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN-371.SNP.12:17383493 chr12:017383493 0 W/17383493-17383493 FN-371 Single Base Substitution T-G INTERGENIC HET SNo: 360, Mutant_ID: FN-371, Generation: M2, Mutations: 47, Genes: 47, Seed availability: Yes. FN1707-S.SNP.12:17384071 chr12:017384071 0 W/17384071-17384071 FN1707-S SNP A -> C AC=1;AN=188;BQB=0.138213;DP=3803;DP4=1911,1873,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000546354;MQSB=0.980638;RPB=0.10934;SGB=-0.634963;VDB=0.614492;EFF=INTERGENIC(MODIFIER||||||||||1) FN2485.SNP.12:17405505 chr12:017405505 0 W/17405505-17405505 FN2485 SNP T -> C AC=2;AN=200;BQB=0.353676;DP=5183;DP4=2715,2148,40,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.43254e-38;MQSB=0.999607;RPB=0.611918;SGB=220.528;VDB=0.41628;EFF=INTERGENIC(MODIFIER||||||||||1) FN3419-S.SNP.12:17409927 chr12:017409927 0 W/17409927-17409927 FN3419-S SNP G -> A AC=1;AN=184;BQB=0.967067;DP=2138;DP4=1023,1036,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44872e-08;MQSB=0.636575;RPB=0.813529;SGB=53.2642;VDB=0.830068;EFF=INTRON(MODIFIER||||109|LOC_Os12g29340|protein_coding|CODING|LOC_Os12g29340.1|1|1) FN990-S.SNP.12:17410189 chr12:017410189 0 W/17410189-17410189 FN990-S Single Base Substitution T-C INTRON HET SNo: 894, Mutant_ID: FN990-S, Generation: M2, Mutations: 72, Genes: 50, Seed availability: Yes. FN3764-S.SNP.12:17416747 chr12:017416747 0 W/17416747-17416747 FN3764-S SNP T -> C AC=2;AN=190;BQB=0.981769;DP=2592;DP4=1255,1235,16,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.95613e-18;MQSB=0.999404;RPB=0.839047;SGB=59.414;VDB=0.912372;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|atA/atG|I1683M|1831|LOC_Os12g29350|protein_coding|CODING|LOC_Os12g29350.1|4|1) FN3815-S.SNP.12:17419465 chr12:017419465 0 W/17419465-17419465 FN3815-S SNP G -> T AC=1;AN=190;BQB=0.980889;DP=2765;DP4=1332,1367,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.83643e-07;MQSB=0.997838;RPB=0.842683;SGB=10.8904;VDB=0.577201;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccA|P777|1831|LOC_Os12g29350|protein_coding|CODING|LOC_Os12g29350.1|4|1) FN1297-S.SNP.12:17431472 chr12:017431472 0 W/17431472-17431472 FN1297-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g29360 retrotransposon protein, putative, unclassified, expressed SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1067-S.SNP.12:17433316 chr12:017433316 0 W/17433316-17433316 FN1067-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g29360 retrotransposon protein, putative, unclassified, expressed SNo: 954, Mutant_ID: FN1067-S, Generation: M2, Mutations: 68, Genes: 19, Seed availability: Yes. FN1630-S.SNP.12:17435778 chr12:017435778 0 W/17435778-17435778 FN1630-S Single Base Substitution G-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN3837-S.SNP.12:17445890 chr12:017445890 0 W/17445890-17445890 FN3837-S SNP G -> A AC=1;AN=190;BQB=0.473694;DP=3091;DP4=1448,1532,5,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.39129e-07;MQSB=0.965251;RPB=0.936755;SGB=71.8647;VDB=0.0139058;EFF=INTERGENIC(MODIFIER||||||||||1) FN955-S.SNP.12:17452361 chr12:017452361 0 W/17452361-17452361 FN955-S Single Base Substitution C-T INTERGENIC HET SNo: 860, Mutant_ID: FN955-S, Generation: M2, Mutations: 67, Genes: 32, Seed availability: Yes. FN482-S.SNP.12:17453188 chr12:017453188 0 W/17453188-17453188 FN482-S Single Base Substitution G-T INTERGENIC HET SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN3465-S.SNP.12:17454520 chr12:017454520 0 W/17454520-17454520 FN3465-S SNP G -> A AC=1;AN=184;BQB=0.479701;DP=3738;DP4=1845,1782,19,14;HOB=5.90737e-05;ICB=0.00011879;MQ=24;MQ0F=0.20305;MQB=0.000866486;MQSB=0.00565951;RPB=0.0401816;SGB=106.184;VDB=0.337896;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtC/gtT|V1136|1522|LOC_Os12g29380|protein_coding|CODING|LOC_Os12g29380.1|1|1) FN1261-S.SNP.12:17456787 chr12:017456787 0 W/17456787-17456787 FN1261-S Single Base Substitution G-A STOP_GAINED HET LOC_Os12g29380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN429-S.SNP.12:17457285 chr12:017457285 0 W/17457285-17457285 FN429-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g29380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN-218.SNP.12:17458539 chr12:017458539 0 W/17458539-17458539 FN-218 Single Base Substitution A-T INTERGENIC HET SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2386.SNP.12:17458860 chr12:017458860 0 W/17458860-17458860 FN2386 SNP A -> G AC=1;AN=192;BQB=0.941294;DP=5075;DP4=2495,2296,12,14;HOB=5.42535e-05;ICB=0.000109072;MQ=36;MQ0F=0.0650246;MQB=0.717711;MQSB=0;RPB=0.867607;SGB=51.9931;VDB=0.71803;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.12:17466501 chr12:017466501 0 W/17466501-17466501 FN3050-S SNP C -> A AC=1;AN=184;BQB=0.869583;DP=3446;DP4=1714,1600,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.15426e-09;MQSB=0.912529;RPB=0.815795;SGB=23.2751;VDB=0.378999;EFF=INTERGENIC(MODIFIER||||||||||1) FN3050-S.SNP.12:17466502 chr12:017466502 0 W/17466502-17466502 FN3050-S SNP C -> T AC=1;AN=184;BQB=0.646032;DP=3452;DP4=1699,1618,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.69299e-10;MQSB=0.976362;RPB=0.638146;SGB=23.2751;VDB=0.765375;EFF=INTERGENIC(MODIFIER||||||||||1) W22-2-1.SNP.12:17467288 chr12:017467288 0 W/17467288-17467288 W22-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1180-S.SNP.12:17470454 chr12:017470454 0 W/17470454-17470454 FN1180-S Single Base Substitution T-C INTRON HET SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN-133.SNP.12:17476762 chr12:017476762 0 W/17476762-17476762 FN-133 Single Base Substitution C-G INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. FN2539-S.SNP.12:17479654 chr12:017479654 0 W/17479654-17479654 FN2539-S SNP C -> G AC=1;AN=198;BQB=0.997149;DP=4653;DP4=1950,2306,14,13;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.225876;MQB=0.0261259;MQSB=0;RPB=0.787137;SGB=55.2955;VDB=0.786255;EFF=INTRON(MODIFIER||||316|LOC_Os12g29430|protein_coding|CODING|LOC_Os12g29430.1|1|1) FN1037-S.SNP.12:17486294 chr12:017486294 0 W/17486294-17486294 FN1037-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g29434 wall-associated receptor kinase 3 precursor, putative, expressed SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN2713-S.SNP.12:17500263 chr12:017500263 0 W/17500263-17500263 FN2713-S SNP T -> C AC=1;AN=200;BQB=0.982727;DP=4394;DP4=2055,2041,22,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.76666e-16;MQSB=0.856104;RPB=0.643429;SGB=94.3471;VDB=0.89519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aac/Gac|N20D|637|LOC_Os12g29450|protein_coding|CODING|LOC_Os12g29450.1|1|1) FN3538-S.SNP.12:17502484 chr12:017502484 0 W/17502484-17502484 FN3538-S SNP A -> C AC=1;AN=188;BQB=0.945729;DP=2355;DP4=1195,1087,9,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.90266e-07;MQSB=0.92451;RPB=0.94628;SGB=48.979;VDB=0.591114;EFF=INTERGENIC(MODIFIER||||||||||1) FN_812-4-1.SNP.12:17503899 chr12:017503899 0 W/17503899-17503899 FN_812-4-1 Single Base Substitution C-T HET SNo: 1489, Mutant_ID: FN_812-4-1, Generation: M3, Mutations: 63, Genes: 14, Seed availability: Yes. FN4344-S.SNP.12:17515879 chr12:017515879 0 W/17515879-17515879 FN4344-S SNP C -> T AC=1;AN=170;BQB=0.999003;DP=2544;DP4=1239,1206,10,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.15119e-09;MQSB=0.99183;RPB=0.81409;SGB=61.2001;VDB=0.479999;EFF=INTERGENIC(MODIFIER||||||||||1) FN1426-S.SNP.12:17520531 chr12:017520531 0 W/17520531-17520531 FN1426-S Single Base Substitution G-A INTERGENIC HET SNo: 1200, Mutant_ID: FN1426-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: Yes. FN780-S.SNP.12:17528563 chr12:017528563 0 W/17528563-17528563 FN780-S Single Base Substitution T-C INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN2126-S.SNP.12:17532608 chr12:017532608 0 W/17532608-17532608 FN2126-S SNP A -> G AC=2;AN=168;BQB=0.336208;DP=3348;DP4=1240,2026,18,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.79671e-16;MQSB=0.0197085;RPB=0.975827;SGB=-6.32537;VDB=0.419015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1476-S.SNP.12:17539184 chr12:017539184 0 W/17539184-17539184 FN1476-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1241, Mutant_ID: FN1476-S, Generation: M2, Mutations: 96, Genes: 15, Seed availability: Yes. FN-66.SNP.12:17540369 chr12:017540369 0 W/17540369-17540369 FN-66 Single Base Substitution G-T INTERGENIC HOMO SNo: 66, Mutant_ID: FN-66, Generation: M2, Mutations: 51, Genes: 76, Seed availability: Yes. FN2558-S.SNP.12:17540369 chr12:017540369 0 W/17540369-17540369 FN2558-S SNP G -> T AC=2;AN=198;BQB=0.0146222;DP=4475;DP4=2078,2055,27,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.81058e-22;MQSB=0.944529;RPB=0.336985;SGB=55.6079;VDB=0.699936;EFF=INTERGENIC(MODIFIER||||||||||1) FN-262.SNP.12:17541965 chr12:017541965 0 W/17541965-17541965 FN-262 Single Base Substitution C-T INTERGENIC HET SNo: 261, Mutant_ID: FN-262, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN793-S.SNP.12:17548038 chr12:017548038 0 W/17548038-17548038 FN793-S Single Base Substitution T-G INTERGENIC HET SNo: 713, Mutant_ID: FN793-S, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3371-S.SNP.12:17549883 chr12:017549883 0 W/17549883-17549883 FN3371-S SNP T -> A AC=1;AN=184;BQB=0.95281;DP=2709;DP4=1371,1231,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0262089;MQB=0.0596246;MQSB=0.649594;RPB=0.93519;SGB=21.6609;VDB=0.565813;EFF=INTERGENIC(MODIFIER||||||||||1) FN1434-S.SNP.12:17565452 chr12:017565452 0 W/17565452-17565452 FN1434-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1206, Mutant_ID: FN1434-S, Generation: M2, Mutations: 57, Genes: 11, Seed availability: Yes. FN491-S.SNP.12:17567344 chr12:017567344 0 W/17567344-17567344 FN491-S Single Base Substitution T-G INTERGENIC HOMO SNo: 489, Mutant_ID: FN491-S, Generation: M2, Mutations: 72, Genes: 51, Seed availability: Yes. FN1212-S.SNP.12:17569240 chr12:017569240 0 W/17569240-17569240 FN1212-S Single Base Substitution A-T INTERGENIC HET SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN3886-S.SNP.12:17574693 chr12:017574693 0 W/17574693-17574693 FN3886-S SNP T -> C AC=1;AN=158;BQB=0.990149;DP=2421;DP4=1209,1086,6,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.82242e-06;MQSB=0.904123;RPB=0.778791;SGB=9.60209;VDB=0.508631;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N311S|841|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N311S|841|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N310S|840|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.3|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N310S|840|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.4|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAt/aGt|N223S|753|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.5|8|1) FN3886-S.SNP.12:17574705 chr12:017574705 0 W/17574705-17574705 FN3886-S SNP G -> A AC=1;AN=158;BQB=0.987836;DP=2415;DP4=1233,1111,5,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=8.54457e-06;MQSB=0.962567;RPB=0.869638;SGB=29.5899;VDB=0.193492;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S307F|841|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.1|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S307F|841|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.2|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S306F|840|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.3|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S306F|840|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.4|9|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S219F|753|LOC_Os12g29520|protein_coding|CODING|LOC_Os12g29520.5|8|1) FN661-S.SNP.12:17582163 chr12:017582163 0 W/17582163-17582163 FN661-S Single Base Substitution G-T INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN2081-S.SNP.12:17583050 chr12:017583050 0 W/17583050-17583050 FN2081-S SNP T -> A AC=2;AN=168;BQB=0.810322;DP=3738;DP4=1809,1859,24,27;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.05053e-23;MQSB=0.999556;RPB=0.999925;SGB=-222.855;VDB=0.19141;EFF=INTERGENIC(MODIFIER||||||||||1) FN2081-S.SNP.12:17583051 chr12:017583051 0 W/17583051-17583051 FN2081-S SNP G -> T AC=2;AN=168;BQB=0.845636;DP=3722;DP4=1801,1855,22,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.699e-25;MQSB=0.99394;RPB=0.868638;SGB=-2.44801;VDB=0.319321;EFF=INTERGENIC(MODIFIER||||||||||1) FN678-S.SNP.12:17587628 chr12:017587628 0 W/17587628-17587628 FN678-S Single Base Substitution A-T INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN4187-S.SNP.12:17587697 chr12:017587697 0 W/17587697-17587697 FN4187-S SNP A -> G AC=2;AN=170;BQB=0.551575;DP=2347;DP4=1240,1016,17,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.30354e-13;MQSB=0.999962;RPB=0.340999;SGB=76.1898;VDB=0.0582414;EFF=INTERGENIC(MODIFIER||||||||||1) FN486-S.SNP.12:17592050 chr12:017592050 0 W/17592050-17592050 FN486-S Single Base Substitution C-T INTRON HET SNo: 484, Mutant_ID: FN486-S, Generation: M2, Mutations: 65, Genes: 17, Seed availability: Yes. FN1192-S.SNP.12:17592068 chr12:017592068 0 W/17592068-17592068 FN1192-S Single Base Substitution A-T INTRON HET SNo: 1026, Mutant_ID: FN1192-S, Generation: M2, Mutations: 63, Genes: 17, Seed availability: Yes. FN2611-S.SNP.12:17592261 chr12:017592261 0 W/17592261-17592261 FN2611-S SNP A -> T AC=1;AN=200;BQB=0.999367;DP=4727;DP4=2150,2386,11,12;HOB=5e-05;ICB=0.0001005;MQ=34;MQ0F=0.00571187;MQB=0.0351974;MQSB=0;RPB=0.876816;SGB=72.7161;VDB=0.277136;EFF=INTRON(MODIFIER||||1585|LOC_Os12g29530|protein_coding|CODING|LOC_Os12g29530.1|4|1) FN2467.SNP.12:17595026 chr12:017595026 0 W/17595026-17595026 FN2467 SNP C -> T AC=1;AN=200;BQB=0.990372;DP=4479;DP4=2422,1863,11,12;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.282652;MQB=0.255679;MQSB=0;RPB=0.347197;SGB=17.5158;VDB=0.028365;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V88M|1585|LOC_Os12g29530|protein_coding|CODING|LOC_Os12g29530.1|3|1) FN3373-S.SNP.12:17595713 chr12:017595713 0 W/17595713-17595713 FN3373-S SNP G -> C AC=1;AN=184;BQB=0.299076;DP=2526;DP4=870,1582,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.037213;MQB=0.441932;MQSB=0;RPB=0.939418;SGB=13.188;VDB=0.632941;EFF=INTRON(MODIFIER||||1585|LOC_Os12g29530|protein_coding|CODING|LOC_Os12g29530.1|1|1) FN2234-S.SNP.12:17601624 chr12:017601624 0 W/17601624-17601624 FN2234-S SNP G -> C AC=1;AN=190;BQB=0.687926;DP=5130;DP4=1983,2785,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.64223e-07;MQSB=0.912566;RPB=0.534117;SGB=44.5415;VDB=0.336499;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.12:17601624 chr12:017601624 0 W/17601624-17601624 FN3537-S SNP G -> C AC=2;AN=188;BQB=0.648297;DP=2790;DP4=1035,1681,14,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.06244e-11;MQSB=0.999979;RPB=0.418149;SGB=103.498;VDB=0.644152;EFF=INTERGENIC(MODIFIER||||||||||1) FN3820-S.SNP.12:17601624 chr12:017601624 0 W/17601624-17601624 FN3820-S SNP G -> C AC=2;AN=190;BQB=0.966349;DP=2722;DP4=957,1682,7,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.24959e-12;MQSB=0.989709;RPB=0.697951;SGB=68.0854;VDB=0.191274;EFF=INTERGENIC(MODIFIER||||||||||1) FN320-S.SNP.12:17610819 chr12:017610819 0 W/17610819-17610819 FN320-S Single Base Substitution C-A INTERGENIC HET SNo: 315, Mutant_ID: FN320-S, Generation: M2, Mutations: 59, Genes: 14, Seed availability: Yes. FN1279-S.SNP.12:17618977 chr12:017618977 0 W/17618977-17618977 FN1279-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN3531-S.SNP.12:17626911 chr12:017626911 0 W/17626911-17626911 FN3531-S SNP G -> C AC=1;AN=188;BQB=0.973489;DP=2680;DP4=1318,1285,4,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.20922e-07;MQSB=0.995147;RPB=0.483068;SGB=25.3545;VDB=0.0461493;EFF=INTERGENIC(MODIFIER||||||||||1) FN358-S.SNP.12:17628828 chr12:017628828 0 W/17628828-17628828 FN358-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g29580 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed SNo: 347, Mutant_ID: FN358-S, Generation: M2, Mutations: 49, Genes: 12, Seed availability: Yes. FN4145-S.SNP.12:17632302 chr12:017632302 0 W/17632302-17632302 FN4145-S SNP C -> G AC=1;AN=170;BQB=0.934101;DP=2493;DP4=1055,1366,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.22513e-07;MQSB=0.91699;RPB=0.604617;SGB=43.4296;VDB=0.486768;EFF=UTR_5_PRIME(MODIFIER||2183||404|LOC_Os12g29580|protein_coding|CODING|LOC_Os12g29580.2|1|1),UTR_5_PRIME(MODIFIER||1034||787|LOC_Os12g29580|protein_coding|CODING|LOC_Os12g29580.1|1|1) FN1018-S.SNP.12:17632322 chr12:017632322 0 W/17632322-17632322 FN1018-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN2249-S.SNP.12:17633908 chr12:017633908 0 W/17633908-17633908 FN2249-S SNP T -> G AC=2;AN=190;BQB=0.991395;DP=5239;DP4=2418,2440,20,23;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.67092e-20;MQSB=0.90088;RPB=0.769625;SGB=0.0710663;VDB=0.0230068;EFF=INTERGENIC(MODIFIER||||||||||1) FN1643-S.SNP.12:17634884 chr12:017634884 0 W/17634884-17634884 FN1643-S Single Base Substitution C-T INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN2314.SNP.12:17638020 chr12:017638020 0 W/17638020-17638020 FN2314 SNP T -> A AC=1;AN=192;BQB=0.698952;DP=4988;DP4=2564,2180,2,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.71077e-05;MQSB=0.959972;RPB=0.828276;SGB=30.9536;VDB=0.740326;EFF=INTERGENIC(MODIFIER||||||||||1) FN2137-S.SNP.12:17639760 chr12:017639760 0 W/17639760-17639760 FN2137-S SNP A -> G AC=1;AN=168;BQB=0.189019;DP=975;DP4=466,464,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=35;MQ0F=0.0307692;MQB=0.989159;MQSB=0.87289;RPB=0.990018;SGB=-16.2342;VDB=0.242712;EFF=INTERGENIC(MODIFIER||||||||||1) FN2125-S.SNP.12:17641584 chr12:017641584 0 W/17641584-17641584 FN2125-S SNP C -> T AC=2;AN=168;BQB=0.120569;DP=3395;DP4=2003,1335,22,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.4291e-20;MQSB=0.877149;RPB=0.995039;SGB=82.9551;VDB=0.726706;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.12:17642706 chr12:017642706 0 W/17642706-17642706 FN2795-S SNP C -> T AC=1;AN=198;BQB=0.944138;DP=4225;DP4=2079,1920,6,9;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.61292e-09;MQSB=0.87675;RPB=0.989433;SGB=63.3342;VDB=0.0312318;EFF=INTERGENIC(MODIFIER||||||||||1) FN960-S.SNP.12:17651395 chr12:017651395 0 W/17651395-17651395 FN960-S Single Base Substitution T-C INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN1643-S.SNP.12:17668506 chr12:017668506 0 W/17668506-17668506 FN1643-S Single Base Substitution G-A INTERGENIC HET SNo: 1348, Mutant_ID: FN1643-S, Generation: M2, Mutations: 77, Genes: 131, Seed availability: Yes. FN3480-S.SNP.12:17675116 chr12:017675116 0 W/17675116-17675116 FN3480-S SNP T -> G AC=1;AN=184;BQB=0.317017;DP=2927;DP4=1377,1348,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00717458;MQB=2.20998e-05;MQSB=0.531863;RPB=0.783607;SGB=28.3187;VDB=0.411493;EFF=INTERGENIC(MODIFIER||||||||||1) FN2199-S.SNP.12:17675123 chr12:017675123 0 W/17675123-17675123 FN2199-S SNP A -> T AC=2;AN=190;BQB=0.99726;DP=4614;DP4=1864,2525,12,19;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.0101864;MQB=9.80422e-11;MQSB=0.0697982;RPB=0.908368;SGB=64.5217;VDB=0.0663405;EFF=INTERGENIC(MODIFIER||||||||||1) FN2080-S.SNP.12:17675953 chr12:017675953 0 W/17675953-17675953 FN2080-S SNP G -> A AC=2;AN=168;BQB=0.663039;DP=1637;DP4=1455,123,30,0;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.57997e-12;MQSB=0.0457107;RPB=0.920276;SGB=65.4363;VDB=0.556529;EFF=INTERGENIC(MODIFIER||||||||||1) FN-237.SNP.12:17680067 chr12:017680067 0 W/17680067-17680067 FN-237 Single Base Substitution A-G INTERGENIC HET SNo: 236, Mutant_ID: FN-237, Generation: M2, Mutations: 53, Genes: 27, Seed availability: No. FN2094-S.SNP.12:17682045 chr12:017682045 0 W/17682045-17682045 FN2094-S SNP T -> A AC=2;AN=168;BQB=0.941938;DP=2929;DP4=1030,1836,15,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.29259e-19;MQSB=0.76811;RPB=0.984403;SGB=37.0995;VDB=0.668524;EFF=SYNONYMOUS_CODING(LOW|SILENT|atA/atT|I210|458|LOC_Os12g29650|protein_coding|CODING|LOC_Os12g29650.1|1|1) FN2782-S.SNP.12:17683833 chr12:017683833 0 W/17683833-17683833 FN2782-S SNP G -> A AC=1;AN=186;BQB=0.96297;DP=4041;DP4=1875,1952,14,16;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.5554e-18;MQSB=0.833083;RPB=0.482487;SGB=97.671;VDB=0.705718;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:17686052 chr12:017686052 0 W/17686052-17686052 FN1520-S Single Base Substitution G-C SPLICE_SITE_REGION HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN3864-S.SNP.12:17695385 chr12:017695385 0 W/17695385-17695385 FN3864-S SNP A -> T AC=2;AN=158;BQB=0.724732;DP=2155;DP4=1079,972,10,8;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.51541e-11;MQSB=0.948788;RPB=0.848795;SGB=73.2838;VDB=0.423371;EFF=INTRON(MODIFIER||||92|LOC_Os12g29670|protein_coding|CODING|LOC_Os12g29670.1|1|1) FN1423-S.SNP.12:17697037 chr12:017697037 0 W/17697037-17697037 FN1423-S Single Base Substitution G-T INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN1423-S.SNP.12:17697040 chr12:017697040 0 W/17697040-17697040 FN1423-S Single Base Substitution G-T INTRON HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3710-S.SNP.12:17698399 chr12:017698399 0 W/17698399-17698399 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.956526;DP=2939;DP4=1510,1318,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.7744e-05;MQSB=0.949827;RPB=0.888675;SGB=35.4339;VDB=0.257627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3523-S.SNP.12:17703860 chr12:017703860 0 W/17703860-17703860 FN3523-S SNP A -> T AC=1;AN=188;BQB=0.952186;DP=2654;DP4=1334,1239,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4709e-08;MQSB=0.962118;RPB=0.869337;SGB=58.0655;VDB=0.392815;EFF=INTRON(MODIFIER||||205|LOC_Os12g29680|protein_coding|CODING|LOC_Os12g29680.1|3|1) FN2678-S.SNP.12:17711240 chr12:017711240 0 W/17711240-17711240 FN2678-S SNP G -> A AC=1;AN=200;BQB=0.995457;DP=4821;DP4=2325,2272,7,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00456337;MQB=3.22763e-08;MQSB=0.487832;RPB=0.954716;SGB=47.4799;VDB=0.399873;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N425|1504|LOC_Os12g29690|protein_coding|CODING|LOC_Os12g29690.1|1|1) FN3553-S.SNP.12:17718853 chr12:017718853 0 W/17718853-17718853 FN3553-S SNP G -> C AC=1;AN=188;BQB=0.899391;DP=1208;DP4=1067,47,12,0;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00248344;MQB=2.96592e-05;MQSB=2.14153e-21;RPB=0.932003;SGB=32.441;VDB=0.461625;EFF=INTRON(MODIFIER||||1621|LOC_Os12g29700|protein_coding|CODING|LOC_Os12g29700.1|1|1) FN456-S.SNP.12:17719998 chr12:017719998 0 W/17719998-17719998 FN456-S Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN-261.SNP.12:17720202 chr12:017720202 0 W/17720202-17720202 FN-261 Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 260, Mutant_ID: FN-261, Generation: M2, Mutations: 43, Genes: 55, Seed availability: Yes. FN2285.SNP.12:17777421 chr12:017777421 0 W/17777421-17777421 FN2285 SNP A -> G AC=1;AN=192;BQB=0.77412;DP=4896;DP4=2396,2302,6,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.43806e-08;MQSB=0.689442;RPB=0.84155;SGB=62.9035;VDB=0.252585;EFF=INTERGENIC(MODIFIER||||||||||1) FN2674-S.SNP.12:17785193 chr12:017785193 0 W/17785193-17785193 FN2674-S SNP C -> T AC=1;AN=200;BQB=0.305694;DP=4182;DP4=2487,1393,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.81568e-08;MQSB=0.447186;RPB=0.913541;SGB=51.0851;VDB=0.917641;EFF=INTERGENIC(MODIFIER||||||||||1) FN855-S.SNP.12:17789447 chr12:017789447 0 W/17789447-17789447 FN855-S Single Base Substitution C-A INTRON HET SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN3830-S.SNP.12:17793899 chr12:017793899 0 W/17793899-17793899 FN3830-S SNP G -> A AC=1;AN=190;BQB=0.980136;DP=2406;DP4=1140,1160,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.46197e-08;MQSB=0.919027;RPB=0.330212;SGB=53.6492;VDB=0.00359479;EFF=INTERGENIC(MODIFIER||||||||||1) FN1521-S.SNP.12:17805113 chr12:017805113 0 W/17805113-17805113 FN1521-S Single Base Substitution G-C INTERGENIC Homo SNo: 1273, Mutant_ID: FN1521-S, Generation: M2, Mutations: 82, Genes: 27, Seed availability: Yes. FN2342.SNP.12:17806518 chr12:017806518 0 W/17806518-17806518 FN2342 SNP G -> T AC=1;AN=192;BQB=0.41624;DP=4745;DP4=2197,2266,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00168599;MQB=0.00106375;MQSB=0.000469375;RPB=0.958182;SGB=18.3052;VDB=0.909987;EFF=INTERGENIC(MODIFIER||||||||||1) FN3801-S.SNP.12:17815814 chr12:017815814 0 W/17815814-17815814 FN3801-S SNP T -> C AC=1;AN=190;BQB=0.144237;DP=2358;DP4=1221,1011,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000431724;MQSB=0.968423;RPB=0.990791;SGB=1.00337;VDB=0.652421;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.12:17816212 chr12:017816212 0 W/17816212-17816212 FN561-S Single Base Substitution T-C INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN1217-S.SNP.12:17824523 chr12:017824523 0 W/17824523-17824523 FN1217-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN875-S.SNP.12:17829902 chr12:017829902 0 W/17829902-17829902 FN875-S Single Base Substitution C-A INTERGENIC HET SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN2434.SNP.12:17832057 chr12:017832057 0 W/17832057-17832057 FN2434 SNP G -> A AC=2;AN=200;BQB=0.996962;DP=5044;DP4=2378,2415,13,9;HOB=0.0198;ICB=0.495051;MQ=44;MQ0F=0.00555115;MQB=0.0238766;MQSB=0.0108872;RPB=0.773615;SGB=42.5108;VDB=0.062023;EFF=INTERGENIC(MODIFIER||||||||||1) FN3322-S.SNP.12:17839980 chr12:017839980 0 W/17839980-17839980 FN3322-S SNP G -> T AC=1;AN=184;BQB=0.88867;DP=2776;DP4=1389,1305,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.38064e-05;MQSB=0.859576;RPB=0.560046;SGB=18.1394;VDB=0.380458;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.12:17846224 chr12:017846224 0 W/17846224-17846224 FN1278-S Single Base Substitution G-T INTERGENIC HET SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN1285-S.SNP.12:17850606 chr12:017850606 0 W/17850606-17850606 FN1285-S Single Base Substitution C-G INTRON HOMO SNo: 1099, Mutant_ID: FN1285-S, Generation: M2, Mutations: 79, Genes: 44, Seed availability: Yes. FN2614-S.SNP.12:17851542 chr12:017851542 0 W/17851542-17851542 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.990327;DP=4037;DP4=1954,1873,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.80526e-05;MQSB=0.980358;RPB=0.951875;SGB=16.3688;VDB=0.412554;EFF=INTRON(MODIFIER||||495|LOC_Os12g29850|protein_coding|CODING|LOC_Os12g29850.1|6|1) FN3799-S.SNP.12:17858716 chr12:017858716 0 W/17858716-17858716 FN3799-S SNP G -> A AC=1;AN=190;BQB=0.995581;DP=2343;DP4=1588,667,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.58482e-07;MQSB=0.18364;RPB=0.813424;SGB=58.2031;VDB=0.703613;EFF=INTRON(MODIFIER||||1092|LOC_Os12g29860|protein_coding|CODING|LOC_Os12g29860.1|4|1) FN2328.SNP.12:17859785 chr12:017859785 0 W/17859785-17859785 FN2328 SNP A -> G AC=2;AN=192;BQB=0.578677;DP=5178;DP4=2426,2480,36,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=3.04223e-35;MQSB=0.110696;RPB=0.174265;SGB=239.384;VDB=0.497285;EFF=INTRON(MODIFIER||||1092|LOC_Os12g29860|protein_coding|CODING|LOC_Os12g29860.1|5|1) FN2200-S.SNP.12:17866796 chr12:017866796 0 W/17866796-17866796 FN2200-S SNP C -> T AC=1;AN=190;BQB=0.975142;DP=4380;DP4=1919,2031,20,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022831;MQB=1.93058e-12;MQSB=0.812685;RPB=0.0866552;SGB=-108.329;VDB=0.257232;EFF=INTERGENIC(MODIFIER||||||||||1) FN4177-S.SNP.12:17876869 chr12:017876869 0 W/17876869-17876869 FN4177-S SNP C -> T AC=1;AN=170;BQB=0.789829;DP=2609;DP4=1236,1301,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.71546e-05;MQSB=0.0305963;RPB=0.31515;SGB=12.556;VDB=0.91083;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.12:17881374 chr12:017881374 0 W/17881374-17881374 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3454-S.SNP.12:17884885 chr12:017884885 0 W/17884885-17884885 FN3454-S SNP T -> A AC=1;AN=184;BQB=0.984463;DP=3713;DP4=1761,1845,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.54735e-07;MQSB=0.999671;RPB=0.964298;SGB=28.7043;VDB=0.8548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y284N|299|LOC_Os12g29920|protein_coding|CODING|LOC_Os12g29920.1|2|1) FN2553-S.SNP.12:17890828 chr12:017890828 0 W/17890828-17890828 FN2553-S SNP G -> A AC=1;AN=198;BQB=0.383731;DP=4364;DP4=2124,1960,6,6;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000229148;MQB=4.03665e-06;MQSB=0.868261;RPB=0.649088;SGB=49.5489;VDB=0.840969;EFF=INTERGENIC(MODIFIER||||||||||1) FN872-S.SNP.12:17896933 chr12:017896933 0 W/17896933-17896933 FN872-S Single Base Substitution G-A INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN872-S.SNP.12:17896934 chr12:017896934 0 W/17896934-17896934 FN872-S Single Base Substitution T-G INTERGENIC HET SNo: 778, Mutant_ID: FN872-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN-215.SNP.12:17906825 chr12:017906825 0 W/17906825-17906825 FN-215 Single Base Substitution A-G INTERGENIC HOMO SNo: 214, Mutant_ID: FN-215, Generation: M2, Mutations: 80, Genes: 154, Seed availability: Yes. FN3749-S.SNP.12:17917302 chr12:017917302 0 W/17917302-17917302 FN3749-S SNP C -> T AC=1;AN=190;BQB=0.901575;DP=2583;DP4=725,1673,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=7.65109e-06;MQSB=1.97129e-09;RPB=0.983616;SGB=1.00337;VDB=0.696823;EFF=INTRON(MODIFIER||||430|LOC_Os12g29980|protein_coding|CODING|LOC_Os12g29980.1|2|1),INTRON(MODIFIER||||411|LOC_Os12g29980|protein_coding|CODING|LOC_Os12g29980.2|2|1) FN2322.SNP.12:17918591 chr12:017918591 0 W/17918591-17918591 FN2322 SNP T -> C AC=1;AN=192;BQB=0.771662;DP=4929;DP4=2224,2427,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=9.66315e-10;MQSB=0.196214;RPB=0.996195;SGB=36.607;VDB=0.19525;EFF=INTRON(MODIFIER||||430|LOC_Os12g29980|protein_coding|CODING|LOC_Os12g29980.1|3|1),INTRON(MODIFIER||||411|LOC_Os12g29980|protein_coding|CODING|LOC_Os12g29980.2|3|1) FN1197-S.SNP.12:17921015 chr12:017921015 0 W/17921015-17921015 FN1197-S Single Base Substitution T-A INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN3312-S.SNP.12:17924485 chr12:017924485 0 W/17924485-17924485 FN3312-S SNP A -> C AC=1;AN=184;BQB=0.880165;DP=3221;DP4=1559,1544,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.77704e-11;MQSB=0.93406;RPB=0.9826;SGB=49.835;VDB=0.507603;EFF=INTERGENIC(MODIFIER||||||||||1) FN3057-S.SNP.12:17927080 chr12:017927080 0 W/17927080-17927080 FN3057-S SNP G -> A AC=1;AN=184;BQB=0.965783;DP=2838;DP4=1337,1398,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.26336e-06;MQSB=0.935732;RPB=0.853433;SGB=13.188;VDB=0.539478;EFF=INTRON(MODIFIER||||461|LOC_Os12g29990|protein_coding|CODING|LOC_Os12g29990.1|8|1),INTRON(MODIFIER||||399|LOC_Os12g29990|protein_coding|CODING|LOC_Os12g29990.2|8|1),INTRON(MODIFIER||||347|LOC_Os12g29990|protein_coding|CODING|LOC_Os12g29990.4|8|1) FN3983-S.SNP.12:17934230 chr12:017934230 0 W/17934230-17934230 FN3983-S SNP C -> A AC=2;AN=168;BQB=0.67771;DP=2526;DP4=721,1657,6,18;HOB=0.0235261;ICB=0.494119;MQ=37;MQ0F=0.0760095;MQB=0.969638;MQSB=7.1341e-08;RPB=0.59319;SGB=44.0621;VDB=0.404821;EFF=INTERGENIC(MODIFIER||||||||||1) FN963-S.SNP.12:17936264 chr12:017936264 0 W/17936264-17936264 FN963-S Single Base Substitution T-C INTERGENIC HET SNo: 867, Mutant_ID: FN963-S, Generation: M2, Mutations: 61, Genes: 16, Seed availability: Yes. FN3316-S.SNP.12:17938886 chr12:017938886 0 W/17938886-17938886 FN3316-S SNP A -> T AC=2;AN=184;BQB=0.67178;DP=2687;DP4=1206,1352,11,4;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.63692e-07;MQSB=0.616163;RPB=0.880557;SGB=23.2751;VDB=0.587892;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.12:17939791 chr12:017939791 0 W/17939791-17939791 FN2452 SNP T -> C AC=1;AN=200;BQB=0.219676;DP=3503;DP4=1744,1117,4,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00028547;MQB=1.77693e-09;MQSB=0.942632;RPB=0.533174;SGB=-117.09;VDB=0.095914;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K125E|328|LOC_Os12g30000|protein_coding|CODING|LOC_Os12g30000.1|1|1) FN2261-S.SNP.12:17942171 chr12:017942171 0 W/17942171-17942171 FN2261-S SNP A -> G AC=2;AN=188;BQB=0.476171;DP=5129;DP4=2791,2020,40,40;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.00038994;MQB=1.73384e-20;MQSB=0.00102877;RPB=0.309202;SGB=353.213;VDB=0.733549;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.12:17945266 chr12:017945266 0 W/17945266-17945266 FN938-S Single Base Substitution C-A INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN3436-S.SNP.12:17947102 chr12:017947102 0 W/17947102-17947102 FN3436-S SNP A -> G AC=1;AN=184;BQB=0.405675;DP=2253;DP4=1164,950,11,7;HOB=5.90737e-05;ICB=0.00011879;MQ=29;MQ0F=0.153573;MQB=0.671623;MQSB=0.00649545;RPB=0.432662;SGB=-14.1922;VDB=0.424774;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.12:17947633 chr12:017947633 0 W/17947633-17947633 FN2224-S SNP C -> T AC=2;AN=190;BQB=0.506732;DP=5015;DP4=2653,2020,35,26;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000199402;MQB=8.0658e-28;MQSB=0.314935;RPB=0.8268;SGB=206.687;VDB=0.608021;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.12:17947895 chr12:017947895 0 W/17947895-17947895 FN945-S Single Base Substitution C-A INTERGENIC HOMO SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN-162.SNP.12:17949163 chr12:017949163 0 W/17949163-17949163 FN-162 Single Base Substitution G-C INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN738-S.SNP.12:17953441 chr12:017953441 0 W/17953441-17953441 FN738-S Single Base Substitution A-G INTERGENIC HET SNo: 663, Mutant_ID: FN738-S, Generation: M2, Mutations: 58, Genes: 327, Seed availability: Yes. FN985-S.SNP.12:17956894 chr12:017956894 0 W/17956894-17956894 FN985-S Single Base Substitution T-C INTRON HET SNo: 889, Mutant_ID: FN985-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN729-S.SNP.12:17957470 chr12:017957470 0 W/17957470-17957470 FN729-S Single Base Substitution T-A SPLICE_SITE_REGION HET SNo: 654, Mutant_ID: FN729-S, Generation: M2, Mutations: 55, Genes: 25, Seed availability: Yes. FN1339-S.SNP.12:17967926 chr12:017967926 0 W/17967926-17967926 FN1339-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN4312-S.SNP.12:17968647 chr12:017968647 0 W/17968647-17968647 FN4312-S SNP G -> T AC=1;AN=170;BQB=0.974639;DP=2330;DP4=1152,1114,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.10601e-06;MQSB=0.999906;RPB=0.423289;SGB=38.987;VDB=0.577201;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.12:17980381 chr12:017980381 0 W/17980381-17980381 FN632-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g30040 transmembrane amino acid transporter protein, putative, expressed SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN2147-S.SNP.12:17986943 chr12:017986943 0 W/17986943-17986943 FN2147-S SNP C -> T AC=1;AN=168;BQB=0.0649994;DP=4055;DP4=2159,1860,7,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.63259e-08;MQSB=0.998235;RPB=0.776633;SGB=-100.631;VDB=0.195063;EFF=INTERGENIC(MODIFIER||||||||||1) FN2092-S.SNP.12:18007198 chr12:018007198 0 W/18007198-18007198 FN2092-S SNP C -> T AC=1;AN=168;BQB=0.92759;DP=4340;DP4=2191,2080,22,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.33822e-17;MQSB=0.999898;RPB=0.83176;SGB=-86.8983;VDB=0.307273;EFF=INTRON(MODIFIER||||735|LOC_Os12g30070|protein_coding|CODING|LOC_Os12g30070.1|3|1) FN450-S.SNP.12:18007261 chr12:018007261 0 W/18007261-18007261 FN450-S Single Base Substitution A-T INTRON HET SNo: 449, Mutant_ID: FN450-S, Generation: M2, Mutations: 48, Genes: 14, Seed availability: Yes. FN788-S.SNP.12:18011404 chr12:018011404 0 W/18011404-18011404 FN788-S Single Base Substitution G-A INTERGENIC HOMO SNo: 708, Mutant_ID: FN788-S, Generation: M2, Mutations: 68, Genes: 56, Seed availability: Yes. FN1065-S.SNP.12:18016459 chr12:018016459 0 W/18016459-18016459 FN1065-S Single Base Substitution T-C INTERGENIC HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN3418-S.SNP.12:18017541 chr12:018017541 0 W/18017541-18017541 FN3418-S SNP G -> A AC=1;AN=184;BQB=0.996801;DP=2382;DP4=889,1408,3,8;HOB=5.90737e-05;ICB=0.00011879;MQ=28;MQ0F=0.241394;MQB=0.116679;MQSB=0;RPB=0.996783;SGB=44.2207;VDB=0.66123;EFF=INTERGENIC(MODIFIER||||||||||1) FN687-S.SNP.12:18023101 chr12:018023101 0 W/18023101-18023101 FN687-S Single Base Substitution C-T INTERGENIC HET SNo: 619, Mutant_ID: FN687-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN4129-S.SNP.12:18024049 chr12:018024049 0 W/18024049-18024049 FN4129-S SNP A -> G AC=1;AN=182;BQB=0.532615;DP=3098;DP4=1541,1454,16,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000322789;MQB=1.40345e-10;MQSB=0.889324;RPB=0.279546;SGB=89.2199;VDB=0.429959;EFF=INTERGENIC(MODIFIER||||||||||1) FN1222-S.SNP.12:18024343 chr12:018024343 0 W/18024343-18024343 FN1222-S Single Base Substitution A-G INTERGENIC HET SNo: 1050, Mutant_ID: FN1222-S, Generation: M2, Mutations: 69, Genes: 131, Seed availability: Yes. FN2301.SNP.12:18025285 chr12:018025285 0 W/18025285-18025285 FN2301 SNP A -> C AC=1;AN=192;BQB=0.97262;DP=5062;DP4=2408,2369,12,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.26172e-12;MQSB=0.996377;RPB=0.966718;SGB=39.1713;VDB=0.411302;EFF=INTERGENIC(MODIFIER||||||||||1) FN3528-S.SNP.12:18043040 chr12:018043040 0 W/18043040-18043040 FN3528-S SNP C -> A AC=1;AN=188;BQB=0.799479;DP=2405;DP4=1209,1136,12,7;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=2.4443e-08;MQSB=0.738754;RPB=0.939097;SGB=80.782;VDB=0.331391;EFF=INTRON(MODIFIER||||867|LOC_Os12g30120|protein_coding|CODING|LOC_Os12g30120.1|7|1) FN1258-S.SNP.12:18045129 chr12:018045129 0 W/18045129-18045129 FN1258-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g30120 retrotransposon protein, putative, unclassified, expressed SNo: 1075, Mutant_ID: FN1258-S, Generation: M2, Mutations: 69, Genes: 41, Seed availability: Yes. FN3553-S.SNP.12:18045142 chr12:018045142 0 W/18045142-18045142 FN3553-S SNP A -> T AC=1;AN=188;BQB=0.913858;DP=2744;DP4=1366,1264,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.00291545;MQB=4.39015e-09;MQSB=0.750907;RPB=0.302779;SGB=98.9552;VDB=0.312977;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttt/Att|F592I|867|LOC_Os12g30120|protein_coding|CODING|LOC_Os12g30120.1|7|1) FN3863-S.SNP.12:18045389 chr12:018045389 0 W/18045389-18045389 FN3863-S SNP C -> T AC=2;AN=158;BQB=0.887639;DP=2478;DP4=1087,1290,17,12;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0.00484262;MQB=5.81778e-12;MQSB=0.713759;RPB=0.969468;SGB=87.9846;VDB=0.955753;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gaa/Aaa|E576K|867|LOC_Os12g30120|protein_coding|CODING|LOC_Os12g30120.1|6|1) FN1409-S.SNP.12:18047461 chr12:018047461 0 W/18047461-18047461 FN1409-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g30120 retrotransposon protein, putative, unclassified, expressed SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2680-S.SNP.12:18048351 chr12:018048351 0 W/18048351-18048351 FN2680-S SNP A -> G AC=1;AN=200;BQB=0.731566;DP=4780;DP4=2000,2531,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.12028e-08;MQSB=0.994345;RPB=0.95789;SGB=36.6644;VDB=0.111;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.12:18051331 chr12:018051331 0 W/18051331-18051331 FN3505-S SNP T -> C AC=2;AN=188;BQB=0.861036;DP=2178;DP4=1296,813,7,10;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.000459137;MQB=1.67853e-08;MQSB=0.25337;RPB=0.974761;SGB=28.6195;VDB=0.0350931;EFF=INTERGENIC(MODIFIER||||||||||1) FN1433-S.SNP.12:18053197 chr12:018053197 0 W/18053197-18053197 FN1433-S Single Base Substitution G-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN395-S.SNP.12:18053197 chr12:018053197 0 W/18053197-18053197 FN395-S Single Base Substitution G-T INTERGENIC HOMO SNo: 381, Mutant_ID: FN395-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN2688-S.SNP.12:18054767 chr12:018054767 0 W/18054767-18054767 FN2688-S SNP C -> T AC=1;AN=200;BQB=0.997293;DP=4911;DP4=2264,2367,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.87477e-09;MQSB=0.962459;RPB=0.8259;SGB=11.0951;VDB=0.261067;EFF=INTERGENIC(MODIFIER||||||||||1) FN2322.SNP.12:18055289 chr12:018055289 0 W/18055289-18055289 FN2322 SNP A -> C AC=1;AN=192;BQB=0.753866;DP=4798;DP4=2176,2371,6,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.6401e-10;MQSB=0.982586;RPB=0.17716;SGB=8.91915;VDB=0.362884;EFF=INTERGENIC(MODIFIER||||||||||1) FN3800-S.SNP.12:18057555 chr12:018057555 0 W/18057555-18057555 FN3800-S SNP G -> A AC=1;AN=190;BQB=0.995936;DP=2280;DP4=1256,959,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.000877193;MQB=0.000697529;MQSB=0.48636;RPB=0.706998;SGB=21.8853;VDB=0.197354;EFF=INTERGENIC(MODIFIER||||||||||1) FN1385-S.SNP.12:18058937 chr12:018058937 0 W/18058937-18058937 FN1385-S Single Base Substitution A-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3763-S.SNP.12:18062086 chr12:018062086 0 W/18062086-18062086 FN3763-S SNP G -> A AC=1;AN=190;BQB=0.622788;DP=2285;DP4=924,1277,3,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00193507;MQSB=0.863899;RPB=0.561238;SGB=18.3316;VDB=0.936663;EFF=INTERGENIC(MODIFIER||||||||||1) FN1525-S.SNP.12:18062096 chr12:018062096 0 W/18062096-18062096 FN1525-S Single Base Substitution G-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN2765-S.SNP.12:18063017 chr12:018063017 0 W/18063017-18063017 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.302085;DP=4294;DP4=1995,2011,8,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.64475e-08;MQSB=0.979028;RPB=0.918617;SGB=26.7492;VDB=0.788008;EFF=INTERGENIC(MODIFIER||||||||||1) FN2667-S.SNP.12:18071896 chr12:018071896 0 W/18071896-18071896 FN2667-S SNP G -> C AC=1;AN=200;BQB=0.510045;DP=4905;DP4=2286,2375,5,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.49995e-06;MQSB=0.170304;RPB=0.393092;SGB=35.8441;VDB=0.458922;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.12:18073290 chr12:018073290 0 W/18073290-18073290 FN1652-S Single Base Substitution G-C INTERGENIC HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN3489-S.SNP.12:18076931 chr12:018076931 0 W/18076931-18076931 FN3489-S SNP G -> T AC=1;AN=184;BQB=0.911;DP=2481;DP4=1246,1166,10,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.44047e-10;MQSB=0.944179;RPB=0.11162;SGB=53.3568;VDB=0.281015;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.12:18085312 chr12:018085312 0 W/18085312-18085312 FN1667-S SNP T -> G AC=1;AN=188;BQB=0.197207;DP=3334;DP4=1567,1727,11,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.15236e-08;MQSB=0.943309;RPB=0.979446;SGB=-39.1914;VDB=0.212683;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.12:18085313 chr12:018085313 0 W/18085313-18085313 FN1667-S SNP G -> A AC=1;AN=188;BQB=0.258786;DP=3334;DP4=1565,1729,10,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.69875e-09;MQSB=0.934528;RPB=0.997801;SGB=14.798;VDB=0.310466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2340.SNP.12:18085585 chr12:018085585 0 W/18085585-18085585 FN2340 SNP A -> T AC=2;AN=192;BQB=0.608432;DP=4653;DP4=2302,2028,19,13;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.13059e-17;MQSB=0.980795;RPB=0.986171;SGB=103.938;VDB=0.568031;EFF=INTERGENIC(MODIFIER||||||||||1) FN2252-S.SNP.12:18086311 chr12:018086311 0 W/18086311-18086311 FN2252-S SNP T -> C AC=1;AN=190;BQB=0.694338;DP=4990;DP4=2546,2177,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.49529e-06;MQSB=0.986866;RPB=0.634123;SGB=39.9877;VDB=0.780718;EFF=INTERGENIC(MODIFIER||||||||||1) FN624-S.SNP.12:18094897 chr12:018094897 0 W/18094897-18094897 FN624-S Single Base Substitution T-C INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN-379.SNP.12:18095025 chr12:018095025 0 W/18095025-18095025 FN-379 Single Base Substitution G-A INTERGENIC HOMO SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN950-S.SNP.12:18103452 chr12:018103452 0 W/18103452-18103452 FN950-S Single Base Substitution T-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN3630-S.SNP.12:18106995 chr12:018106995 0 W/18106995-18106995 FN3630-S SNP C -> T AC=1;AN=190;BQB=0.789963;DP=2476;DP4=1123,1206,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.046042;MQB=0.713165;MQSB=0.000130093;RPB=0.999981;SGB=35.4339;VDB=0.977976;EFF=INTERGENIC(MODIFIER||||||||||1) 705-6.SNP.12:18109766 chr12:018109766 0 W/18109766-18109766 705-6 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os12g30160 hypothetical protein SNo: 1464, Mutant_ID: 705-6, Generation: M2, Mutations: 49, Genes: 58, Seed availability: Yes. FN1401-S.SNP.12:18112263 chr12:018112263 0 W/18112263-18112263 FN1401-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN-196.SNP.12:18123321 chr12:018123321 0 W/18123321-18123321 FN-196 Single Base Substitution T-G INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3673-S.SNP.12:18128598 chr12:018128598 0 W/18128598-18128598 FN3673-S SNP G -> T AC=1;AN=190;BQB=0.970336;DP=2787;DP4=1305,1399,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.20442e-05;MQSB=0.770519;RPB=0.981153;SGB=39.9877;VDB=0.560194;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tAt|S573Y|1112|LOC_Os12g30200|protein_coding|CODING|LOC_Os12g30200.1|1|1) FN1332-S.SNP.12:18138256 chr12:018138256 0 W/18138256-18138256 FN1332-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g30214 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN-272.SNP.12:18146865 chr12:018146865 0 W/18146865-18146865 FN-272 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g30240 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 269, Mutant_ID: FN-272, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN3849-S.SNP.12:18147746 chr12:018147746 0 W/18147746-18147746 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.954029;DP=2620;DP4=1204,1320,10,14;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.0438931;MQB=1.54805e-05;MQSB=0.715295;RPB=0.399996;SGB=-42.315;VDB=0.867193;EFF=INTRON(MODIFIER||||501|LOC_Os12g30240|protein_coding|CODING|LOC_Os12g30240.1|1|1) FN856-S.SNP.12:18152283 chr12:018152283 0 W/18152283-18152283 FN856-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g30250 retrotransposon protein, putative, Ty3-gypsy subclass SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN624-S.SNP.12:18158355 chr12:018158355 0 W/18158355-18158355 FN624-S Single Base Substitution G-A INTERGENIC HOMO SNo: 589, Mutant_ID: FN624-S, Generation: M2, Mutations: 57, Genes: 60, Seed availability: Yes. FN_552-1-1.SNP.12:18158840 chr12:018158840 0 W/18158840-18158840 FN_552-1-1 Single Base Substitution C-T Homo SNo: 1427, Mutant_ID: FN_552-1-1, Generation: M3, Mutations: 59, Genes: 10, Seed availability: No. FN3439-S.SNP.12:18159265 chr12:018159265 0 W/18159265-18159265 FN3439-S SNP T -> C AC=1;AN=184;BQB=0.999962;DP=2762;DP4=1328,1345,11,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.08337e-10;MQSB=0.998418;RPB=0.93883;SGB=42.7914;VDB=0.108447;EFF=INTERGENIC(MODIFIER||||||||||1) FN882-S.SNP.12:18159850 chr12:018159850 0 W/18159850-18159850 FN882-S Single Base Substitution G-T INTERGENIC HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2544-S.SNP.12:18162372 chr12:018162372 0 W/18162372-18162372 FN2544-S SNP C -> T AC=1;AN=198;BQB=0.596321;DP=3344;DP4=1639,1555,8,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.69155e-09;MQSB=0.0110023;RPB=0.990538;SGB=54.5295;VDB=0.0766324;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaC/aaT|N310|477|LOC_Os12g30270|protein_coding|CODING|LOC_Os12g30270.1|4|1) FN926-S.SNP.12:18162372 chr12:018162372 0 W/18162372-18162372 FN926-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. FN938-S.SNP.12:18164626 chr12:018164626 0 W/18164626-18164626 FN938-S Single Base Substitution G-A INTERGENIC HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2629-S.SNP.12:18167773 chr12:018167773 0 W/18167773-18167773 FN2629-S SNP G -> A AC=1;AN=200;BQB=0.570542;DP=4501;DP4=2161,2156,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.13278e-13;MQSB=0.966426;RPB=0.654301;SGB=39.9056;VDB=0.810009;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P424|708|LOC_Os12g30290|protein_coding|CODING|LOC_Os12g30290.1|1|1) FN2677-S.SNP.12:18169259 chr12:018169259 0 W/18169259-18169259 FN2677-S SNP G -> A AC=1;AN=200;BQB=0.668659;DP=4683;DP4=1997,2458,11,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.31216e-15;MQSB=0.982558;RPB=0.143753;SGB=72.7161;VDB=0.258131;EFF=INTERGENIC(MODIFIER||||||||||1) FN3360-S.SNP.12:18170554 chr12:018170554 0 W/18170554-18170554 FN3360-S SNP T -> C AC=2;AN=184;BQB=0.988713;DP=2905;DP4=1356,1428,20,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.47168e-20;MQSB=0.9764;RPB=0.539648;SGB=73.7109;VDB=0.219252;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.12:18175144 chr12:018175144 0 W/18175144-18175144 FN1251-S Single Base Substitution C-G INTERGENIC HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3394-S.SNP.12:18177887 chr12:018177887 0 W/18177887-18177887 FN3394-S SNP A -> G AC=1;AN=184;BQB=0.999983;DP=2504;DP4=1127,1266,5,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.65314e-05;MQSB=0.889297;RPB=0.477518;SGB=21.6609;VDB=0.984435;EFF=INTERGENIC(MODIFIER||||||||||1) FN3292-S.SNP.12:18182953 chr12:018182953 0 W/18182953-18182953 FN3292-S SNP C -> G AC=1;AN=184;BQB=0.989413;DP=2217;DP4=1283,849,11,1;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.00721696;MQB=0.526156;MQSB=2.10625e-24;RPB=0.912345;SGB=48.7425;VDB=0.629855;EFF=INTERGENIC(MODIFIER||||||||||1) FN2730-S.SNP.12:18186432 chr12:018186432 0 W/18186432-18186432 FN2730-S SNP T -> C AC=1;AN=200;BQB=0.915261;DP=5357;DP4=2644,2466,11,6;HOB=5e-05;ICB=0.0001005;MQ=17;MQ0F=0.380437;MQB=0.0365769;MQSB=0;RPB=0.596658;SGB=51.0851;VDB=0.454079;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N417|1361|LOC_Os12g30310|protein_coding|CODING|LOC_Os12g30310.1|2|1) FN3798-S.SNP.12:18191249 chr12:018191249 0 W/18191249-18191249 FN3798-S SNP C -> G AC=1;AN=190;BQB=0.860311;DP=2598;DP4=1387,1089,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.75058e-09;MQSB=0.65857;RPB=0.67396;SGB=28.7675;VDB=0.889686;EFF=INTERGENIC(MODIFIER||||||||||1) FN1038-S.SNP.12:18193598 chr12:018193598 0 W/18193598-18193598 FN1038-S Single Base Substitution T-G INTERGENIC HET SNo: 934, Mutant_ID: FN1038-S, Generation: M2, Mutations: 53, Genes: 75, Seed availability: Yes. FN2267-S.SNP.12:18193598 chr12:018193598 0 W/18193598-18193598 FN2267-S SNP T -> G AC=1;AN=190;BQB=0.968398;DP=4283;DP4=1877,2182,5,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000233481;MQB=2.08265e-06;MQSB=0.0646151;RPB=0.652521;SGB=36.1006;VDB=0.571213;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.12:18193598 chr12:018193598 0 W/18193598-18193598 FN3462-S SNP T -> G AC=2;AN=184;BQB=0.825591;DP=1964;DP4=843,1016,5,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.82327e-07;MQSB=0.939794;RPB=0.844675;SGB=44.2207;VDB=0.0327975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2183-S.SNP.12:18196687 chr12:018196687 0 W/18196687-18196687 FN2183-S SNP T -> C AC=1;AN=190;BQB=0.993256;DP=5414;DP4=2744,2409,19,18;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.82195e-22;MQSB=0.999938;RPB=0.817718;SGB=121.394;VDB=0.740764;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.12:18201695 chr12:018201695 0 W/18201695-18201695 FN-288 Single Base Substitution G-C INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN-82.SNP.12:18201695 chr12:018201695 0 W/18201695-18201695 FN-82 Single Base Substitution G-C INTERGENIC HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2197-S.SNP.12:18201695 chr12:018201695 0 W/18201695-18201695 FN2197-S SNP G -> C AC=1;AN=190;BQB=0.131324;DP=5290;DP4=2629,2279,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00189536;MQSB=0.952585;RPB=0.105172;SGB=10.8904;VDB=0.667402;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.12:18201695 chr12:018201695 0 W/18201695-18201695 FN755-S Single Base Substitution G-C INTERGENIC HOMO SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN967-S.SNP.12:18201695 chr12:018201695 0 W/18201695-18201695 FN967-S Single Base Substitution G-C INTERGENIC HET SNo: 871, Mutant_ID: FN967-S, Generation: M2, Mutations: 63, Genes: 19, Seed availability: Yes. FN2130-S.SNP.12:18204415 chr12:018204415 0 W/18204415-18204415 FN2130-S SNP G -> T AC=1;AN=168;BQB=0.97834;DP=1609;DP4=856,706,7,2;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.2025e-05;MQSB=0.965235;RPB=0.822827;SGB=21.0249;VDB=0.358583;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W54L|109|LOC_Os12g30320|protein_coding|CODING|LOC_Os12g30320.1|1|1) FN3326-S.SNP.12:18206276 chr12:018206276 0 W/18206276-18206276 FN3326-S SNP T -> C AC=2;AN=184;BQB=0.999935;DP=2815;DP4=1320,1358,18,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.91473e-17;MQSB=0.754755;RPB=0.991857;SGB=106.184;VDB=0.811808;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.12:18208723 chr12:018208723 0 W/18208723-18208723 FN815-S Single Base Substitution A-C INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1018-S.SNP.12:18211330 chr12:018211330 0 W/18211330-18211330 FN1018-S Single Base Substitution C-A INTERGENIC HET SNo: 916, Mutant_ID: FN1018-S, Generation: M2, Mutations: 68, Genes: 26, Seed availability: Yes. FN978-S.SNP.12:18211695 chr12:018211695 0 W/18211695-18211695 FN978-S Single Base Substitution G-C INTERGENIC HET SNo: 882, Mutant_ID: FN978-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN430-S.SNP.12:18212698 chr12:018212698 0 W/18212698-18212698 FN430-S Single Base Substitution G-C INTERGENIC HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN2083-S.SNP.12:18213559 chr12:018213559 0 W/18213559-18213559 FN2083-S SNP A -> G AC=2;AN=168;BQB=0.696902;DP=2964;DP4=1681,1214,18,23;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.01665e-20;MQSB=0.149061;RPB=0.68936;SGB=85.386;VDB=0.612156;EFF=INTRON(MODIFIER||||1360|LOC_Os12g30340|protein_coding|CODING|LOC_Os12g30340.1|1|1) FN2207-S.SNP.12:18221744 chr12:018221744 0 W/18221744-18221744 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.47282;DP=4534;DP4=2215,1987,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.0127922;MQB=0.0362953;MQSB=0.890241;RPB=0.998151;SGB=18.552;VDB=0.252301;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.12:18228634 chr12:018228634 0 W/18228634-18228634 FN3810-S SNP G -> A AC=1;AN=190;BQB=0.984042;DP=2890;DP4=1429,1384,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00380623;MQB=0.433101;MQSB=2.07812e-10;RPB=0.918194;SGB=39.9877;VDB=0.675225;EFF=SYNONYMOUS_CODING(LOW|SILENT|agC/agT|S1110|2013|LOC_Os12g30360|protein_coding|CODING|LOC_Os12g30360.1|2|1) FN2758-S.SNP.12:18234038 chr12:018234038 0 W/18234038-18234038 FN2758-S SNP T -> C AC=1;AN=200;BQB=0.617954;DP=4450;DP4=1965,2260,6,8;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.000224719;MQB=0.00281556;MQSB=0;RPB=0.73757;SGB=40.2696;VDB=0.431328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3837-S.SNP.12:18235270 chr12:018235270 0 W/18235270-18235270 FN3837-S SNP T -> C AC=1;AN=190;BQB=0.999895;DP=3005;DP4=1265,1226,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=31;MQ0F=0.0955075;MQB=0.982862;MQSB=0.0795901;RPB=0.918102;SGB=-54.5347;VDB=0.0354851;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.12:18237094 chr12:018237094 0 W/18237094-18237094 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.865993;DP=2251;DP4=731,1438,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.00533096;MQB=0.00171358;MQSB=0.461018;RPB=0.67976;SGB=15.903;VDB=0.815244;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.12:18251797 chr12:018251797 0 W/18251797-18251797 FN2344 SNP G -> C AC=1;AN=192;BQB=0.646189;DP=4959;DP4=2204,2388,8,14;HOB=5.42535e-05;ICB=0.000109072;MQ=19;MQ0F=0.279693;MQB=0.853688;MQSB=0;RPB=0.999992;SGB=41.7357;VDB=0.691413;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCc/tGc|S9C|327|LOC_Os12g30410|protein_coding|CODING|LOC_Os12g30410.1|1|1) FN3322-S.SNP.12:18251802 chr12:018251802 0 W/18251802-18251802 FN3322-S SNP C -> T AC=1;AN=184;BQB=0.969899;DP=3724;DP4=1908,1699,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=20;MQ0F=0.288937;MQB=0.221002;MQSB=0;RPB=0.668398;SGB=35.7479;VDB=0.123415;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcA|S7|327|LOC_Os12g30410|protein_coding|CODING|LOC_Os12g30410.1|1|1) FN2182-S.SNP.12:18263183 chr12:018263183 0 W/18263183-18263183 FN2182-S SNP T -> A AC=1;AN=190;BQB=0.391728;DP=5265;DP4=2827,2129,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=23;MQ0F=0.244824;MQB=0.264089;MQSB=0;RPB=0.470942;SGB=57.4238;VDB=0.879985;EFF=INTERGENIC(MODIFIER||||||||||1) FN780-S.SNP.12:18269558 chr12:018269558 0 W/18269558-18269558 FN780-S Single Base Substitution T-A INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN-125.SNP.12:18270768 chr12:018270768 0 W/18270768-18270768 FN-125 Single Base Substitution G-A INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3606-S.SNP.12:18281329 chr12:018281329 0 W/18281329-18281329 FN3606-S SNP G -> T AC=2;AN=190;BQB=0.830126;DP=2929;DP4=1272,1553,9,7;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0;MQB=1.07736e-06;MQSB=0.194577;RPB=0.976665;SGB=67.3108;VDB=0.731822;EFF=INTERGENIC(MODIFIER||||||||||1) FN2214-S.SNP.12:18281669 chr12:018281669 0 W/18281669-18281669 FN2214-S SNP T -> A AC=1;AN=190;BQB=0.996408;DP=4808;DP4=2266,2117,14,12;HOB=5.54017e-05;ICB=0.000111386;MQ=40;MQ0F=0;MQB=1.84965e-08;MQSB=0.216316;RPB=0.957664;SGB=51.7524;VDB=0.512257;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.12:18285287 chr12:018285287 0 W/18285287-18285287 FN724-S Single Base Substitution G-A INTERGENIC HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN3850-S.SNP.12:18287852 chr12:018287852 0 W/18287852-18287852 FN3850-S SNP T -> C AC=1;AN=158;BQB=0.97183;DP=2396;DP4=1245,1073,5,8;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=2.4571e-05;MQSB=0.942986;RPB=0.995801;SGB=34.0735;VDB=0.962079;EFF=INTRON(MODIFIER||||108|LOC_Os12g30460|protein_coding|CODING|LOC_Os12g30460.1|2|1) FN3358-S.SNP.12:18288652 chr12:018288652 0 W/18288652-18288652 FN3358-S SNP C -> T AC=1;AN=184;BQB=0.634985;DP=2831;DP4=1284,1420,9,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.67763e-08;MQSB=0.765154;RPB=0.900868;SGB=28.3187;VDB=0.617125;EFF=INTRON(MODIFIER||||108|LOC_Os12g30460|protein_coding|CODING|LOC_Os12g30460.1|2|1) FN2364.SNP.12:18290462 chr12:018290462 0 W/18290462-18290462 FN2364 SNP T -> C AC=1;AN=192;BQB=0.867063;DP=4937;DP4=2218,2448,10,6;HOB=5.42535e-05;ICB=0.000109072;MQ=37;MQ0F=0;MQB=2.22992e-06;MQSB=0.139924;RPB=0.948913;SGB=26.3496;VDB=0.98931;EFF=INTRON(MODIFIER||||108|LOC_Os12g30460|protein_coding|CODING|LOC_Os12g30460.1|1|1) W721-2-1.SNP.12:18313349 chr12:018313349 0 W/18313349-18313349 W721-2-1 Single Base Substitution C-A INTERGENIC HET SNo: 1477, Mutant_ID: W721-2-1, Generation: M2, Mutations: 54, Genes: 20, Seed availability: Yes. FN1065-S.SNP.12:18317899 chr12:018317899 0 W/18317899-18317899 FN1065-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 953, Mutant_ID: FN1065-S, Generation: M2, Mutations: 77, Genes: 262, Seed availability: Yes. FN752-S.SNP.12:18345428 chr12:018345428 0 W/18345428-18345428 FN752-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g30540 ubiquitin carboxyl-terminal hydrolase, putative, expressed SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1440-S.SNP.12:18349727 chr12:018349727 0 W/18349727-18349727 FN1440-S Single Base Substitution A-T INTERGENIC HET SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN916-S.SNP.12:18358642 chr12:018358642 0 W/18358642-18358642 FN916-S Single Base Substitution G-T INTERGENIC HOMO SNo: 822, Mutant_ID: FN916-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2459.SNP.12:18358643 chr12:018358643 0 W/18358643-18358643 FN2459 SNP T -> A AC=2;AN=200;BQB=0.389675;DP=3878;DP4=1630,1912,11,9;HOB=0.0198;ICB=0.495051;MQ=42;MQ0F=0;MQB=1.99881e-05;MQSB=0.94823;RPB=0.865455;SGB=61.9006;VDB=0.51241;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.12:18361374 chr12:018361374 0 W/18361374-18361374 FN3383-S SNP C -> T AC=2;AN=184;BQB=0.978241;DP=2960;DP4=1437,1396,9,11;HOB=0.0215028;ICB=0.494625;MQ=38;MQ0F=0;MQB=0.0034551;MQSB=0.762106;RPB=0.652607;SGB=84.9167;VDB=0.0165355;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T126I|384|LOC_Os12g30570|protein_coding|CODING|LOC_Os12g30570.1|1|1) FN2234-S.SNP.12:18361775 chr12:018361775 0 W/18361775-18361775 FN2234-S SNP A -> G AC=1;AN=190;BQB=0.99509;DP=3817;DP4=1471,1722,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.07495e-05;MQSB=0.0515878;RPB=0.850402;SGB=39.6545;VDB=0.559121;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Aag/Gag|K260E|384|LOC_Os12g30570|protein_coding|CODING|LOC_Os12g30570.1|1|1) FN3714-S.SNP.12:18394749 chr12:018394749 0 W/18394749-18394749 FN3714-S SNP C -> A AC=1;AN=190;BQB=0.958768;DP=1980;DP4=923,963,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.10801e-07;MQSB=0.144093;RPB=0.975557;SGB=39.6545;VDB=0.229729;EFF=INTERGENIC(MODIFIER||||||||||1) FN1358-S.SNP.12:18395910 chr12:018395910 0 W/18395910-18395910 FN1358-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g30630 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN1358-S.SNP.12:18395912 chr12:018395912 0 W/18395912-18395912 FN1358-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN_830-6-1.SNP.12:18396671 chr12:018396671 0 W/18396671-18396671 FN_830-6-1 Single Base Substitution T-G Homo SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. FN2630-S.SNP.12:18428022 chr12:018428022 0 W/18428022-18428022 FN2630-S SNP C -> T AC=1;AN=200;BQB=0.615267;DP=3760;DP4=1320,2203,7,13;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000531915;MQB=1.41067e-09;MQSB=0.000349388;RPB=0.784647;SGB=86.5007;VDB=0.752181;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A741|978|LOC_Os12g30680|protein_coding|CODING|LOC_Os12g30680.1|5|1) FN_827-1.SNP.12:18430430 chr12:018430430 0 W/18430430-18430430 FN_827-1 Single Base Substitution G-A HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN_827-1.SNP.12:18430433 chr12:018430433 0 W/18430433-18430433 FN_827-1 Single Base Substitution A-C HET SNo: 1496, Mutant_ID: FN_827-1, Generation: M3, Mutations: 70, Genes: 38, Seed availability: Yes. FN369-S.SNP.12:18431894 chr12:018431894 0 W/18431894-18431894 FN369-S Single Base Substitution C-T INTRON HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN1262-S.SNP.12:18432680 chr12:018432680 0 W/18432680-18432680 FN1262-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g30690 retrotransposon protein, putative, unclassified, expressed SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN1069-S.SNP.12:18437345 chr12:018437345 0 W/18437345-18437345 FN1069-S Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 956, Mutant_ID: FN1069-S, Generation: M2, Mutations: 71, Genes: 19, Seed availability: Yes. W423-5-1.SNP.12:18439224 chr12:018439224 0 W/18439224-18439224 W423-5-1 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN2680-S.SNP.12:18711969 chr12:018711969 0 W/18711969-18711969 FN2680-S SNP T -> G AC=1;AN=200;BQB=0.895622;DP=4871;DP4=2246,2379,13,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.40217e-18;MQSB=0.905395;RPB=0.882506;SGB=65.9573;VDB=0.777891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1630-S.SNP.12:18712657 chr12:018712657 0 W/18712657-18712657 FN1630-S Single Base Substitution G-T INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN2457.SNP.12:18713201 chr12:018713201 0 W/18713201-18713201 FN2457 SNP C -> T AC=2;AN=200;BQB=0.991309;DP=3376;DP4=1557,1638,11,15;HOB=0.0198;ICB=0.495051;MQ=41;MQ0F=0.00296209;MQB=0.0086487;MQSB=0.977354;RPB=0.992055;SGB=114.132;VDB=0.55931;EFF=INTERGENIC(MODIFIER||||||||||1) FN3382-S.SNP.12:18713926 chr12:018713926 0 W/18713926-18713926 FN3382-S SNP C -> T AC=1;AN=184;BQB=0.628951;DP=3098;DP4=1503,1464,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=42;MQ0F=0;MQB=0.00534743;MQSB=0.162738;RPB=0.999558;SGB=57.786;VDB=0.917153;EFF=INTERGENIC(MODIFIER||||||||||1) FN-150.SNP.12:18714102 chr12:018714102 0 W/18714102-18714102 FN-150 Single Base Substitution C-T INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3369-S.SNP.12:18714102 chr12:018714102 0 W/18714102-18714102 FN3369-S SNP C -> T AC=1;AN=184;BQB=0.512153;DP=2884;DP4=1004,1674,5,10;HOB=5.90737e-05;ICB=0.00011879;MQ=44;MQ0F=0;MQB=0.00224971;MQSB=0.805521;RPB=0.885931;SGB=42.7914;VDB=0.406539;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.12:18716270 chr12:018716270 0 W/18716270-18716270 FN2599-S SNP C -> G AC=2;AN=198;BQB=0.968097;DP=4199;DP4=2029,1925,31,21;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=1.92977e-16;MQSB=0.814768;RPB=0.723918;SGB=233.354;VDB=0.106235;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.12:18725702 chr12:018725702 0 W/18725702-18725702 FN3535-S SNP C -> G AC=2;AN=188;BQB=0.97888;DP=2496;DP4=1221,1224,8,9;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.15112e-11;MQSB=0.976586;RPB=0.222075;SGB=71.6954;VDB=0.147249;EFF=INTERGENIC(MODIFIER||||||||||1) FN2542-S.SNP.12:18738532 chr12:018738532 0 W/18738532-18738532 FN2542-S SNP T -> C AC=1;AN=198;BQB=0.998354;DP=3780;DP4=1910,1616,10,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.92774e-11;MQSB=0.920302;RPB=0.894229;SGB=72.5245;VDB=0.680279;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D602G|1732|LOC_Os12g31130|protein_coding|CODING|LOC_Os12g31130.1|2|1) FN2649-S.SNP.12:18744990 chr12:018744990 0 W/18744990-18744990 FN2649-S SNP C -> T AC=1;AN=200;BQB=0.99356;DP=4453;DP4=1766,2464,11,13;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.00208e-09;MQSB=0.0129345;RPB=0.432653;SGB=47.7211;VDB=0.388467;EFF=INTERGENIC(MODIFIER||||||||||1) FN244-S.SNP.12:18793399 chr12:018793399 0 W/18793399-18793399 FN244-S Single Base Substitution C-T INTERGENIC HET SNo: 243, Mutant_ID: FN244-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN4043-S.SNP.12:18797343 chr12:018797343 0 W/18797343-18797343 FN4043-S SNP G -> T AC=1;AN=168;BQB=0.964499;DP=2831;DP4=1482,1226,10,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0;MQB=1.18898e-07;MQSB=0.642498;RPB=0.568853;SGB=-15.8033;VDB=0.487596;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.12:18797395 chr12:018797395 0 W/18797395-18797395 FN946-S Single Base Substitution G-A INTERGENIC HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN1561-S.SNP.12:18801542 chr12:018801542 0 W/18801542-18801542 FN1561-S Single Base Substitution A-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN1561-S.SNP.12:18801543 chr12:018801543 0 W/18801543-18801543 FN1561-S Single Base Substitution G-T INTERGENIC HET SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN432-S.SNP.12:18804632 chr12:018804632 0 W/18804632-18804632 FN432-S Single Base Substitution T-G INTRON HET SNo: 431, Mutant_ID: FN432-S, Generation: M2, Mutations: 67, Genes: 93, Seed availability: Yes. FN369-S.SNP.12:18804700 chr12:018804700 0 W/18804700-18804700 FN369-S Single Base Substitution A-T INTRON HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN4184-S.SNP.12:18804958 chr12:018804958 0 W/18804958-18804958 FN4184-S SNP G -> A AC=2;AN=170;BQB=0.958236;DP=2135;DP4=1046,1020,10,8;HOB=0.0232526;ICB=0.494188;MQ=48;MQ0F=0;MQB=1.1748e-07;MQSB=0.430511;RPB=0.990104;SGB=74.528;VDB=0.78813;EFF=INTRON(MODIFIER||||246|LOC_Os12g31230|protein_coding|CODING|LOC_Os12g31230.1|1|1) FN3407-S.SNP.12:18820538 chr12:018820538 0 W/18820538-18820538 FN3407-S SNP T -> A AC=1;AN=184;BQB=0.719853;DP=2377;DP4=928,1316,4,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.0018385;MQSB=0.295154;RPB=0.944258;SGB=-3.85014;VDB=0.234935;EFF=INTERGENIC(MODIFIER||||||||||1) FN4255-S.SNP.12:18825849 chr12:018825849 0 W/18825849-18825849 FN4255-S SNP C -> G AC=1;AN=170;BQB=0.843009;DP=2794;DP4=1450,1271,9,8;HOB=6.92042e-05;ICB=0.000139222;MQ=34;MQ0F=0.0644238;MQB=0.00778338;MQSB=1.95933e-16;RPB=0.954691;SGB=70.0854;VDB=0.75904;EFF=INTRON(MODIFIER||||285|LOC_Os12g31280|protein_coding|CODING|LOC_Os12g31280.1|4|1) FN-329.SNP.12:18826126 chr12:018826126 0 W/18826126-18826126 FN-329 Single Base Substitution G-A STOP_GAINED HET LOC_Os12g31280 transposon protein, putative, CACTA, En/Spm sub-class SNo: 322, Mutant_ID: FN-329, Generation: M2, Mutations: 60, Genes: 168, Seed availability: Yes. W463-2-1.SNP.12:18828029 chr12:018828029 0 W/18828029-18828029 W463-2-1 Single Base Substitution A-C INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN3385-S.SNP.12:18829012 chr12:018829012 0 W/18829012-18829012 FN3385-S SNP T -> A AC=1;AN=184;BQB=0.595423;DP=2645;DP4=1236,1319,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.00227427;MQSB=0.412951;RPB=0.492432;SGB=39.2697;VDB=0.624391;EFF=INTERGENIC(MODIFIER||||||||||1) FN775-S.SNP.12:18830023 chr12:018830023 0 W/18830023-18830023 FN775-S Single Base Substitution C-A INTERGENIC HET SNo: 696, Mutant_ID: FN775-S, Generation: M2, Mutations: 75, Genes: 218, Seed availability: Yes. FN2375.SNP.12:18832244 chr12:018832244 0 W/18832244-18832244 FN2375 SNP G -> C AC=2;AN=192;BQB=0.995892;DP=5028;DP4=2159,2617,15,21;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.000994431;MQB=7.13449e-21;MQSB=0.879713;RPB=0.42637;SGB=77.6365;VDB=0.396879;EFF=INTRON(MODIFIER||||131|LOC_Os12g31290|protein_coding|CODING|LOC_Os12g31290.1|1|1) FN-295.SNP.12:18836500 chr12:018836500 0 W/18836500-18836500 FN-295 Single Base Substitution G-A INTRON HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN3801-S.SNP.12:18839679 chr12:018839679 0 W/18839679-18839679 FN3801-S SNP G -> A AC=1;AN=190;BQB=0.996167;DP=3159;DP4=1574,1469,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=1.70563e-06;MQSB=0.999929;RPB=0.641653;SGB=85.5263;VDB=0.125793;EFF=INTERGENIC(MODIFIER||||||||||1) FN2611-S.SNP.12:18846545 chr12:018846545 0 W/18846545-18846545 FN2611-S SNP T -> C AC=1;AN=200;BQB=0.949327;DP=4337;DP4=2309,1603,19,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.86296e-20;MQSB=0.802325;RPB=0.431613;SGB=36.7778;VDB=0.783319;EFF=INTERGENIC(MODIFIER||||||||||1) FN474-S.SNP.12:18846915 chr12:018846915 0 W/18846915-18846915 FN474-S Single Base Substitution T-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN474-S.SNP.12:18846916 chr12:018846916 0 W/18846916-18846916 FN474-S Single Base Substitution C-A INTERGENIC HET SNo: 473, Mutant_ID: FN474-S, Generation: M2, Mutations: 71, Genes: 57, Seed availability: Yes. FN-257.SNP.12:18848325 chr12:018848325 0 W/18848325-18848325 FN-257 Single Base Substitution A-G INTERGENIC HET SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3765-S.SNP.12:18858003 chr12:018858003 0 W/18858003-18858003 FN3765-S SNP A -> C AC=1;AN=190;BQB=0.886316;DP=2619;DP4=1274,1285,9,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.43415e-07;MQSB=0.903101;RPB=0.998695;SGB=28.9929;VDB=0.579002;EFF=INTRON(MODIFIER||||185|LOC_Os12g31350|protein_coding|CODING|LOC_Os12g31350.1|2|1) FN1429-S.SNP.12:18878211 chr12:018878211 0 W/18878211-18878211 FN1429-S Single Base Substitution T-G INTRON HET SNo: 1202, Mutant_ID: FN1429-S, Generation: M2, Mutations: 65, Genes: 21, Seed availability: Yes. FN3871-S.SNP.12:18878616 chr12:018878616 0 W/18878616-18878616 FN3871-S SNP G -> A AC=2;AN=158;BQB=0.445839;DP=2643;DP4=1365,1182,17,9;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.60135e-13;MQSB=0.897744;RPB=0.385479;SGB=77.8763;VDB=0.449101;EFF=INTRON(MODIFIER||||341|LOC_Os12g31370|protein_coding|CODING|LOC_Os12g31370.1|8|1) FN230-S.SNP.12:18883405 chr12:018883405 0 W/18883405-18883405 FN230-S Single Base Substitution T-A INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN230-S.SNP.12:18883406 chr12:018883406 0 W/18883406-18883406 FN230-S Single Base Substitution C-A INTERGENIC HOMO SNo: 229, Mutant_ID: FN230-S, Generation: M2, Mutations: 68, Genes: 4, Seed availability: Yes. FN3863-S.SNP.12:18885257 chr12:018885257 0 W/18885257-18885257 FN3863-S SNP C -> T AC=1;AN=158;BQB=0.586506;DP=2220;DP4=1154,1003,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=45;MQ0F=0.00045045;MQB=0.00417007;MQSB=0.916816;RPB=0.638834;SGB=25.2211;VDB=0.508059;EFF=INTERGENIC(MODIFIER||||||||||1) FN3467-S.SNP.12:18892097 chr12:018892097 0 W/18892097-18892097 FN3467-S SNP T -> C AC=2;AN=184;BQB=0.383066;DP=2375;DP4=1134,1152,13,15;HOB=0.0215028;ICB=0.494625;MQ=48;MQ0F=0.000421053;MQB=3.38155e-11;MQSB=0.66296;RPB=0.999995;SGB=121.091;VDB=0.850279;EFF=INTRON(MODIFIER||||97|LOC_Os12g31400|protein_coding|CODING|LOC_Os12g31400.1|3|1) FN3732-S.SNP.12:18892097 chr12:018892097 0 W/18892097-18892097 FN3732-S SNP T -> C AC=2;AN=190;BQB=0.990437;DP=2734;DP4=1349,1282,10,12;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000365764;MQB=4.82099e-11;MQSB=0.952427;RPB=0.992586;SGB=68.0854;VDB=0.0303264;EFF=INTRON(MODIFIER||||97|LOC_Os12g31400|protein_coding|CODING|LOC_Os12g31400.1|3|1) FN3947-S.SNP.12:18892097 chr12:018892097 0 W/18892097-18892097 FN3947-S SNP T -> C AC=2;AN=168;BQB=0.848952;DP=2291;DP4=1092,1109,22,12;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.000436491;MQB=9.21891e-14;MQSB=0.980074;RPB=0.511331;SGB=68.3702;VDB=0.947474;EFF=INTRON(MODIFIER||||97|LOC_Os12g31400|protein_coding|CODING|LOC_Os12g31400.1|3|1) FN931-S.SNP.12:18892097 chr12:018892097 0 W/18892097-18892097 FN931-S Single Base Substitution T-C INTRON HET SNo: 837, Mutant_ID: FN931-S, Generation: M2, Mutations: 76, Genes: 58, Seed availability: Yes. FN2240-S.SNP.12:18896636 chr12:018896636 0 W/18896636-18896636 FN2240-S SNP T -> A AC=1;AN=190;BQB=0.423365;DP=4788;DP4=2086,2463,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000208855;MQB=0.000129048;MQSB=0.742991;RPB=0.998955;SGB=62.7569;VDB=0.856077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-346.SNP.12:18907709 chr12:018907709 0 W/18907709-18907709 FN-346 Single Base Substitution C-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN-289.SNP.12:18910896 chr12:018910896 0 W/18910896-18910896 FN-289 Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g31440 expressed protein SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN780-S.SNP.12:18911086 chr12:018911086 0 W/18911086-18911086 FN780-S Single Base Substitution A-T INTRON HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN4119-S.SNP.12:18911197 chr12:018911197 0 W/18911197-18911197 FN4119-S SNP G -> T AC=2;AN=182;BQB=0.509102;DP=2834;DP4=1416,1351,9,7;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=3.12391e-08;MQSB=0.984101;RPB=0.984742;SGB=46.1603;VDB=0.904757;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Tgg|G197W|488|LOC_Os12g31440|protein_coding|CODING|LOC_Os12g31440.1|4|1) FN2253-S.SNP.12:18920708 chr12:018920708 0 W/18920708-18920708 FN2253-S SNP T -> C AC=1;AN=190;BQB=0.955375;DP=3947;DP4=1955,1733,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000596292;MQSB=0.249685;RPB=0.895223;SGB=5.78296;VDB=0.732531;EFF=INTERGENIC(MODIFIER||||||||||1) FN1405-S.SNP.12:18920838 chr12:018920838 0 W/18920838-18920838 FN1405-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN1405-S.SNP.12:18920839 chr12:018920839 0 W/18920839-18920839 FN1405-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN2780-S.SNP.12:18923567 chr12:018923567 0 W/18923567-18923567 FN2780-S SNP C -> T AC=1;AN=198;BQB=0.446315;DP=3774;DP4=1855,1617,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=44;MQ0F=0.000264971;MQB=3.97417e-10;MQSB=0.0105082;RPB=0.938368;SGB=94.0758;VDB=0.484017;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A255V|2202|LOC_Os12g31470|protein_coding|CODING|LOC_Os12g31470.1|1|1) FN-362.SNP.12:18928546 chr12:018928546 0 W/18928546-18928546 FN-362 Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN3477-S.SNP.12:18932312 chr12:018932312 0 W/18932312-18932312 FN3477-S SNP A -> C AC=1;AN=184;BQB=0.971192;DP=2574;DP4=1178,1294,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.56506e-11;MQSB=0.999375;RPB=0.988251;SGB=71.3514;VDB=0.607133;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.12:18938844 chr12:018938844 0 W/18938844-18938844 FN1089-S Single Base Substitution G-A UTR_3_PRIME HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2740-S.SNP.12:18941730 chr12:018941730 0 W/18941730-18941730 FN2740-S SNP C -> A AC=2;AN=200;BQB=0.914421;DP=4989;DP4=2205,2453,25,30;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=1.12551e-21;MQSB=0.0751942;RPB=0.296976;SGB=247.682;VDB=0.0472659;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C65F|330|LOC_Os12g31490|protein_coding|CODING|LOC_Os12g31490.1|2|1) FN628-S.SNP.12:18944975 chr12:018944975 0 W/18944975-18944975 FN628-S Single Base Substitution T-C INTERGENIC HOMO SNo: 593, Mutant_ID: FN628-S, Generation: M2, Mutations: 56, Genes: 41, Seed availability: Yes. FN4074-S.SNP.12:18947217 chr12:018947217 0 W/18947217-18947217 FN4074-S SNP G -> C AC=2;AN=182;BQB=0.841555;DP=2548;DP4=1358,1056,14,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=8.95991e-13;MQSB=0.955596;RPB=0.95045;SGB=14.2148;VDB=0.982142;EFF=INTERGENIC(MODIFIER||||||||||1) FN2593-S.SNP.12:19056536 chr12:019056536 0 W/19056536-19056536 FN2593-S SNP C -> A AC=1;AN=198;BQB=0.993415;DP=4266;DP4=2070,1986,16,13;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0;MQB=9.74109e-09;MQSB=0.832691;RPB=0.88869;SGB=60.4858;VDB=0.852676;EFF=INTRON(MODIFIER||||269|LOC_Os12g31640|protein_coding|CODING|LOC_Os12g31640.2|3|1) FN2538-S.SNP.12:19057221 chr12:019057221 0 W/19057221-19057221 FN2538-S SNP C -> T AC=2;AN=198;BQB=0.815993;DP=4126;DP4=2051,1836,35,20;HOB=0.019998;ICB=0.495001;MQ=47;MQ0F=0;MQB=2.97805e-14;MQSB=0.990263;RPB=0.999972;SGB=8.77878;VDB=0.99525;EFF=INTRON(MODIFIER||||269|LOC_Os12g31640|protein_coding|CODING|LOC_Os12g31640.2|4|1) FN-202.SNP.12:19058134 chr12:019058134 0 W/19058134-19058134 FN-202 Single Base Substitution A-G INTRON HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2441.SNP.12:19061786 chr12:019061786 0 W/19061786-19061786 FN2441 SNP C -> T AC=1;AN=200;BQB=0.92119;DP=3745;DP4=1708,1823,15,9;HOB=5e-05;ICB=0.0001005;MQ=32;MQ0F=0.00186916;MQB=0.000123292;MQSB=0.000100808;RPB=0.656611;SGB=76.3213;VDB=0.00116508;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.12:19067066 chr12:019067066 0 W/19067066-19067066 FN814-S Single Base Substitution G-A INTRON HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN814-S.SNP.12:19067068 chr12:019067068 0 W/19067068-19067068 FN814-S Single Base Substitution G-A INTRON HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN558-S.SNP.12:19067541 chr12:019067541 0 W/19067541-19067541 FN558-S Single Base Substitution G-C INTERGENIC HET SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2709-S.SNP.12:19067694 chr12:019067694 0 W/19067694-19067694 FN2709-S SNP C -> A AC=1;AN=200;BQB=0.479322;DP=4449;DP4=2116,1907,6,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=1.42479e-11;MQSB=4.52937e-05;RPB=0.794439;SGB=54.6902;VDB=0.0610273;EFF=INTERGENIC(MODIFIER||||||||||1) FN2709-S.SNP.12:19067696 chr12:019067696 0 W/19067696-19067696 FN2709-S SNP C -> T AC=1;AN=200;BQB=0.98577;DP=4428;DP4=2120,1908,5,12;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=5.08088e-09;MQSB=4.07393e-06;RPB=0.609558;SGB=29.4849;VDB=0.0663243;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.12:19072165 chr12:019072165 0 W/19072165-19072165 FN3923-S SNP G -> T AC=2;AN=158;BQB=0.780014;DP=2673;DP4=1401,1174,19,15;HOB=0.024996;ICB=0.493752;MQ=43;MQ0F=0;MQB=1.02818e-10;MQSB=0.0909583;RPB=0.273066;SGB=143.195;VDB=0.131997;EFF=UTR_5_PRIME(MODIFIER||1232||222|LOC_Os12g31660|protein_coding|CODING|LOC_Os12g31660.1|1|1) FN2094-S.SNP.12:19126674 chr12:019126674 0 W/19126674-19126674 FN2094-S SNP T -> G AC=1;AN=168;BQB=0.109062;DP=3375;DP4=1579,1752,10,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.96657e-09;MQSB=0.998651;RPB=0.605362;SGB=-41.2125;VDB=0.775216;EFF=SYNONYMOUS_CODING(LOW|SILENT|Agg/Cgg|R82|173|LOC_Os12g31790|protein_coding|CODING|LOC_Os12g31790.1|2|1) FN2437.SNP.12:19130420 chr12:019130420 0 W/19130420-19130420 FN2437 SNP G -> A AC=1;AN=200;BQB=0.418968;DP=4033;DP4=1921,1937,6,6;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=6.38354e-05;MQSB=0.0289889;RPB=0.878213;SGB=49.6594;VDB=0.968135;EFF=INTRON(MODIFIER||||258|LOC_Os12g31800|protein_coding|CODING|LOC_Os12g31800.1|1|1) FN917-S.SNP.12:19142005 chr12:019142005 0 W/19142005-19142005 FN917-S Single Base Substitution A-C INTRON HET SNo: 823, Mutant_ID: FN917-S, Generation: M2, Mutations: 77, Genes: 114, Seed availability: Yes. FN522-S.SNP.12:19145230 chr12:019145230 0 W/19145230-19145230 FN522-S Single Base Substitution T-A INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN522-S.SNP.12:19145231 chr12:019145231 0 W/19145231-19145231 FN522-S Single Base Substitution T-A INTERGENIC HET SNo: 520, Mutant_ID: FN522-S, Generation: M2, Mutations: 71, Genes: 100, Seed availability: Yes. FN4325-S.SNP.12:19145987 chr12:019145987 0 W/19145987-19145987 FN4325-S SNP A -> G AC=1;AN=170;BQB=0.936918;DP=2584;DP4=1305,1219,6,6;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=7.0424e-05;MQSB=0.973102;RPB=0.920869;SGB=47.8722;VDB=0.947197;EFF=INTERGENIC(MODIFIER||||||||||1) FN4126-S.SNP.12:19147386 chr12:019147386 0 W/19147386-19147386 FN4126-S SNP A -> G AC=1;AN=182;BQB=0.983735;DP=2702;DP4=1252,1404,3,7;HOB=6.03792e-05;ICB=0.000121422;MQ=46;MQ0F=0;MQB=9.75942e-07;MQSB=0.893184;RPB=0.957564;SGB=39.6007;VDB=0.577201;EFF=UTR_3_PRIME(MODIFIER||351||295|LOC_Os12g31820|protein_coding|CODING|LOC_Os12g31820.1|8|1) FN3312-S.SNP.12:19152912 chr12:019152912 0 W/19152912-19152912 FN3312-S SNP G -> C AC=1;AN=184;BQB=0.905458;DP=2551;DP4=1193,1281,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0;MQB=0.000255042;MQSB=0.831193;RPB=0.876341;SGB=48.7425;VDB=0.973083;EFF=INTRON(MODIFIER||||323|LOC_Os12g31830|protein_coding|CODING|LOC_Os12g31830.1|2|1) FN1288-S.SNP.12:19158579 chr12:019158579 0 W/19158579-19158579 FN1288-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN1375-S.SNP.12:19170258 chr12:019170258 0 W/19170258-19170258 FN1375-S Single Base Substitution G-T INTERGENIC HET SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN3667-S.SNP.12:19170667 chr12:019170667 0 W/19170667-19170667 FN3667-S SNP C -> T AC=1;AN=190;BQB=0.992784;DP=2978;DP4=1371,1476,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.30351e-07;MQSB=0.979311;RPB=0.614601;SGB=36.1006;VDB=0.619012;EFF=INTERGENIC(MODIFIER||||||||||1) FN1460-S.SNP.12:19171154 chr12:019171154 0 W/19171154-19171154 FN1460-S Single Base Substitution C-T INTERGENIC HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN3477-S.SNP.12:19171770 chr12:019171770 0 W/19171770-19171770 FN3477-S SNP G -> T AC=1;AN=184;BQB=0.556886;DP=2671;DP4=1373,1205,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.00326e-05;MQSB=0.979522;RPB=0.714884;SGB=15.7097;VDB=0.309523;EFF=INTERGENIC(MODIFIER||||||||||1) FN420-S.SNP.12:19173519 chr12:019173519 0 W/19173519-19173519 FN420-S Single Base Substitution T-C INTERGENIC HET SNo: 419, Mutant_ID: FN420-S, Generation: M2, Mutations: 62, Genes: 82, Seed availability: Yes. FN2203-S.SNP.12:19179814 chr12:019179814 0 W/19179814-19179814 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.547474;DP=5233;DP4=2472,2517,24,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.21e-25;MQSB=0.971522;RPB=0.997879;SGB=172.05;VDB=0.296228;EFF=INTERGENIC(MODIFIER||||||||||1) FN2203-S.SNP.12:19179815 chr12:019179815 0 W/19179815-19179815 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.959;DP=5234;DP4=2448,2520,27,15;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.52561e-24;MQSB=0.927649;RPB=0.96149;SGB=92.6144;VDB=0.262452;EFF=INTERGENIC(MODIFIER||||||||||1) FN-288.SNP.12:19180588 chr12:019180588 0 W/19180588-19180588 FN-288 Single Base Substitution T-G INTERGENIC HOMO SNo: 284, Mutant_ID: FN-288, Generation: M2, Mutations: 76, Genes: 47, Seed availability: Yes. FN3764-S.SNP.12:19196753 chr12:019196753 0 W/19196753-19196753 FN3764-S SNP C -> G AC=2;AN=190;BQB=0.787718;DP=3042;DP4=1510,1381,19,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.35981e-16;MQSB=0.888219;RPB=0.426009;SGB=110.732;VDB=0.324101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.12:19197557 chr12:019197557 0 W/19197557-19197557 FN1682-S SNP T -> C AC=1;AN=188;BQB=0.116792;DP=2557;DP4=1386,1135,9,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53751e-06;MQSB=0.862329;RPB=0.767159;SGB=50.1574;VDB=0.904073;EFF=INTERGENIC(MODIFIER||||||||||1) FN3639-S.SNP.12:19197981 chr12:019197981 0 W/19197981-19197981 FN3639-S SNP G -> A AC=1;AN=190;BQB=0.362803;DP=2467;DP4=1016,1363,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00517443;MQSB=0.966401;RPB=0.14163;SGB=21.8853;VDB=0.00909563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1477-S.SNP.12:19201403 chr12:019201403 0 W/19201403-19201403 FN1477-S Single Base Substitution A-G NON_SYNONYMOUS_CODING Homo LOC_Os12g31880 translation initiation factor, putative, expressed SNo: 1242, Mutant_ID: FN1477-S, Generation: M2, Mutations: 94, Genes: 22, Seed availability: Yes. FN2656-S.SNP.12:19206691 chr12:019206691 0 W/19206691-19206691 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.0925598;DP=4849;DP4=2155,2164,29,23;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22295e-26;MQSB=0.998897;RPB=0.68856;SGB=64.0657;VDB=0.893831;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.12:19211009 chr12:019211009 0 W/19211009-19211009 FN2198-S SNP C -> T AC=1;AN=190;BQB=0.976021;DP=4806;DP4=2197,2332,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.78698e-07;MQSB=0.877353;RPB=0.609741;SGB=25.439;VDB=0.711662;EFF=INTERGENIC(MODIFIER||||||||||1) FN2198-S.SNP.12:19211013 chr12:019211013 0 W/19211013-19211013 FN2198-S SNP G -> T AC=1;AN=190;BQB=0.48115;DP=4787;DP4=2226,2343,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.59419e-05;MQSB=0.938075;RPB=0.746573;SGB=21.8853;VDB=0.697668;EFF=INTERGENIC(MODIFIER||||||||||1) FN1735-S.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN1735-S SNP C -> A AC=1;AN=168;BQB=0.132255;DP=429;DP4=146,248,3,6;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.002331;MQB=0.0234688;MQSB=9.10001e-10;RPB=0.884734;SGB=16.6519;VDB=0.111658;EFF=INTERGENIC(MODIFIER||||||||||1) FN2689-S.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN2689-S SNP C -> A AC=2;AN=200;BQB=0.0050643;DP=2100;DP4=230,1766,2,8;HOB=0.0198;ICB=0.495051;MQ=47;MQ0F=0;MQB=0.0022228;MQSB=1.39206e-10;RPB=0.969071;SGB=25.849;VDB=0.0355714;EFF=INTERGENIC(MODIFIER||||||||||1) FN3887-S.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN3887-S SNP C -> A AC=2;AN=158;BQB=0.864003;DP=1232;DP4=519,637,6,7;HOB=0.024996;ICB=0.493752;MQ=47;MQ0F=0;MQB=0.00221698;MQSB=6.95687e-06;RPB=0.932081;SGB=34.0735;VDB=0.457171;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN4110-S SNP C -> A AC=2;AN=180;BQB=0.122951;DP=1480;DP4=610,805,6,5;HOB=0.0219753;ICB=0.494507;MQ=47;MQ0F=0;MQB=0.000825621;MQSB=0.00387988;RPB=0.492597;SGB=28.6061;VDB=0.273442;EFF=INTERGENIC(MODIFIER||||||||||1) FN962-S.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN962-S Single Base Substitution C-A INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN_955-1.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 FN_955-1 Single Base Substitution C-A Homo SNo: 1504, Mutant_ID: FN_955-1, Generation: M3, Mutations: 63, Genes: 66, Seed availability: No. W360-2S-2.SNP.12:19221222 chr12:019221222 0 W/19221222-19221222 W360-2S-2 Single Base Substitution C-A INTERGENIC HOMO SNo: 1406, Mutant_ID: W360-2S-2, Generation: M2, Mutations: 69, Genes: 90, Seed availability: No. FN-303.SNP.12:19222595 chr12:019222595 0 W/19222595-19222595 FN-303 Single Base Substitution G-A INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN1006-S.SNP.12:19225242 chr12:019225242 0 W/19225242-19225242 FN1006-S Single Base Substitution C-T INTERGENIC HOMO SNo: 907, Mutant_ID: FN1006-S, Generation: M2, Mutations: 73, Genes: 37, Seed availability: Yes. FN1332-S.SNP.12:19237909 chr12:019237909 0 W/19237909-19237909 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1332-S.SNP.12:19237910 chr12:019237910 0 W/19237910-19237910 FN1332-S Single Base Substitution A-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN2091-S.SNP.12:19238409 chr12:019238409 0 W/19238409-19238409 FN2091-S SNP T -> C AC=1;AN=168;BQB=0.998379;DP=3516;DP4=1807,1669,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.92559e-13;MQSB=0.965119;RPB=0.989008;SGB=44.0621;VDB=0.471157;EFF=INTERGENIC(MODIFIER||||||||||1) FN2147-S.SNP.12:19260155 chr12:019260155 0 W/19260155-19260155 FN2147-S SNP A -> G AC=1;AN=168;BQB=0.00335476;DP=4724;DP4=2093,2589,9,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.57797e-06;MQSB=0.993772;RPB=0.286162;SGB=-150.343;VDB=0.226867;EFF=INTERGENIC(MODIFIER||||||||||1) FN1348-S.SNP.12:19268358 chr12:019268358 0 W/19268358-19268358 FN1348-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1145, Mutant_ID: FN1348-S, Generation: M2, Mutations: 72, Genes: 15, Seed availability: Yes. FN-196.SNP.12:19269759 chr12:019269759 0 W/19269759-19269759 FN-196 Single Base Substitution C-T INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN3856-S.SNP.12:19270139 chr12:019270139 0 W/19270139-19270139 FN3856-S SNP T -> A AC=1;AN=158;BQB=0.946595;DP=2157;DP4=1108,952,6,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000112684;MQSB=0.761654;RPB=0.50267;SGB=33.9591;VDB=0.285163;EFF=INTERGENIC(MODIFIER||||||||||1) FN2421.SNP.12:19271921 chr12:019271921 0 W/19271921-19271921 FN2421 SNP T -> A AC=1;AN=200;BQB=0.497201;DP=5015;DP4=2484,2260,5,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.10511e-06;MQSB=0.571447;RPB=0.904087;SGB=40.4492;VDB=0.882989;EFF=INTERGENIC(MODIFIER||||||||||1) FN776-S.SNP.12:19275125 chr12:019275125 0 W/19275125-19275125 FN776-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g31980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN772-S.SNP.12:19277398 chr12:019277398 0 W/19277398-19277398 FN772-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g31980 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN2138-S.SNP.12:19278147 chr12:019278147 0 W/19278147-19278147 FN2138-S SNP G -> A AC=1;AN=168;BQB=0.0390017;DP=2396;DP4=1325,1041,11,5;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.013773;MQB=0.172293;MQSB=0.461647;RPB=0.945376;SGB=-97.9335;VDB=0.207427;EFF=INTERGENIC(MODIFIER||||||||||1) FN744-S.SNP.12:19278473 chr12:019278473 0 W/19278473-19278473 FN744-S Single Base Substitution A-T INTERGENIC HOMO SNo: 668, Mutant_ID: FN744-S, Generation: M2, Mutations: 58, Genes: 21, Seed availability: Yes. FN838-S.SNP.12:19280849 chr12:019280849 0 W/19280849-19280849 FN838-S Single Base Substitution A-C INTRON HET SNo: 750, Mutant_ID: FN838-S, Generation: M2, Mutations: 47, Genes: 13, Seed availability: Yes. FN3725-S.SNP.12:19284019 chr12:019284019 0 W/19284019-19284019 FN3725-S SNP T -> C AC=1;AN=190;BQB=0.790085;DP=2796;DP4=1451,1159,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0264664;MQB=0.042688;MQSB=5.85055e-10;RPB=0.999995;SGB=25.439;VDB=0.659505;EFF=INTERGENIC(MODIFIER||||||||||1) FN1758-S.SNP.12:19285349 chr12:019285349 0 W/19285349-19285349 FN1758-S SNP C -> T AC=1;AN=188;BQB=0.622989;DP=2967;DP4=1238,1682,11,16;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.000337041;MQB=1.50999e-10;MQSB=0.718544;RPB=0.118223;SGB=-9.02352;VDB=0.275341;EFF=INTRON(MODIFIER||||623|LOC_Os12g32000|protein_coding|CODING|LOC_Os12g32000.1|2|1) N1-130-3.SNP.12:19286802 chr12:019286802 0 W/19286802-19286802 N1-130-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1378, Mutant_ID: N1-130-3, Generation: M2, Mutations: 33, Genes: 7, Seed availability: Yes. FN424-S.SNP.12:19293400 chr12:019293400 0 W/19293400-19293400 FN424-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g32010 expressed protein SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN-145.SNP.12:19298616 chr12:019298616 0 W/19298616-19298616 FN-145 Single Base Substitution C-T INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN-268.SNP.12:19300198 chr12:019300198 0 W/19300198-19300198 FN-268 Single Base Substitution G-A INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN4023-S.SNP.12:19304208 chr12:019304208 0 W/19304208-19304208 FN4023-S SNP C -> T AC=1;AN=168;BQB=0.645469;DP=2160;DP4=1110,943,7,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.5837e-06;MQSB=0.994343;RPB=0.248382;SGB=56.6036;VDB=0.880659;EFF=INTERGENIC(MODIFIER||||||||||1) FN_789-2-1.SNP.12:19304888 chr12:019304888 0 W/19304888-19304888 FN_789-2-1 Single Base Substitution G-C HET SNo: 1485, Mutant_ID: FN_789-2-1, Generation: M3, Mutations: 58, Genes: 54, Seed availability: Yes. FN3423-S.SNP.12:19308119 chr12:019308119 0 W/19308119-19308119 FN3423-S SNP C -> G AC=2;AN=184;BQB=0.982601;DP=2434;DP4=1000,1354,13,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.64047e-14;MQSB=0.488781;RPB=0.304573;SGB=116.569;VDB=0.956689;EFF=INTERGENIC(MODIFIER||||||||||1) FN2652-S.SNP.12:19309042 chr12:019309042 0 W/19309042-19309042 FN2652-S SNP C -> T AC=1;AN=200;BQB=0.695873;DP=5155;DP4=2353,2409,8,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00176e-06;MQSB=0.672636;RPB=0.63449;SGB=40.2696;VDB=0.34069;EFF=INTERGENIC(MODIFIER||||||||||1) FN-226.SNP.12:19310308 chr12:019310308 0 W/19310308-19310308 FN-226 Single Base Substitution C-G INTERGENIC HOMO SNo: 225, Mutant_ID: FN-226, Generation: M2, Mutations: 76, Genes: 239, Seed availability: Yes. FN1590-S.SNP.12:19313299 chr12:019313299 0 W/19313299-19313299 FN1590-S Single Base Substitution C-T INTERGENIC Homo SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN1326-S.SNP.12:19316547 chr12:019316547 0 W/19316547-19316547 FN1326-S Single Base Substitution G-T INTERGENIC HET SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN2134-S.SNP.12:19318396 chr12:019318396 0 W/19318396-19318396 FN2134-S SNP T -> A AC=1;AN=168;BQB=0.804913;DP=3749;DP4=1943,1757,18,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.45349e-17;MQSB=0.949112;RPB=0.897106;SGB=29.9454;VDB=0.718111;EFF=INTERGENIC(MODIFIER||||||||||1) FN-157.SNP.12:19320037 chr12:019320037 0 W/19320037-19320037 FN-157 Single Base Substitution G-T INTRON HET SNo: 157, Mutant_ID: FN-157, Generation: M2, Mutations: 109, Genes: 89, Seed availability: Yes. FN950-S.SNP.12:19321995 chr12:019321995 0 W/19321995-19321995 FN950-S Single Base Substitution A-T INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN2696-S.SNP.12:19323116 chr12:019323116 0 W/19323116-19323116 FN2696-S SNP C -> A AC=1;AN=200;BQB=0.806533;DP=4543;DP4=2088,2197,10,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.14316e-09;MQSB=0.99174;RPB=0.386048;SGB=29.4849;VDB=0.502001;EFF=INTERGENIC(MODIFIER||||||||||1) FN2784-S.SNP.12:19323886 chr12:019323886 0 W/19323886-19323886 FN2784-S SNP G -> T AC=1;AN=198;BQB=0.820002;DP=4183;DP4=1885,2077,17,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.65221e-15;MQSB=0.357706;RPB=0.542066;SGB=112.051;VDB=0.774028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2217-S.SNP.12:19324311 chr12:019324311 0 W/19324311-19324311 FN2217-S SNP T -> A AC=1;AN=190;BQB=0.998126;DP=5155;DP4=2432,2288,4,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.8096e-05;MQSB=0.743818;RPB=0.95064;SGB=26.3271;VDB=0.6902;EFF=INTERGENIC(MODIFIER||||||||||1) FN2756-S.SNP.12:19324468 chr12:019324468 0 W/19324468-19324468 FN2756-S SNP G -> A AC=2;AN=200;BQB=0.880017;DP=4983;DP4=2411,2303,30,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.30954e-33;MQSB=0.987029;RPB=0.430847;SGB=123.271;VDB=0.00263569;EFF=INTERGENIC(MODIFIER||||||||||1) FN1433-S.SNP.12:19324841 chr12:019324841 0 W/19324841-19324841 FN1433-S Single Base Substitution A-T INTERGENIC HET SNo: 1205, Mutant_ID: FN1433-S, Generation: M2, Mutations: 74, Genes: 174, Seed availability: No. FN3796-S.SNP.12:19331472 chr12:019331472 0 W/19331472-19331472 FN3796-S SNP A -> C AC=2;AN=190;BQB=0.924006;DP=2594;DP4=1379,1088,9,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.63765e-12;MQSB=0.950192;RPB=0.997882;SGB=99.1879;VDB=0.359756;EFF=INTERGENIC(MODIFIER||||||||||1) FN2378.SNP.12:19331957 chr12:019331957 0 W/19331957-19331957 FN2378 SNP C -> T AC=1;AN=192;BQB=0.812138;DP=5026;DP4=2417,2243,18,25;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.45378e-23;MQSB=0.877828;RPB=0.610896;SGB=-47.0904;VDB=0.342069;EFF=INTERGENIC(MODIFIER||||||||||1) FN2620-S.SNP.12:19333051 chr12:019333051 0 W/19333051-19333051 FN2620-S SNP C -> T AC=1;AN=198;BQB=0.471982;DP=3771;DP4=1997,1570,15,10;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.000265182;MQB=9.38263e-08;MQSB=0.00247299;RPB=0.402367;SGB=20.5152;VDB=0.818847;EFF=SPLICE_SITE_DONOR(HIGH||||260|LOC_Os12g32040|protein_coding|CODING|LOC_Os12g32040.1|4|1),INTRON(MODIFIER||||260|LOC_Os12g32040|protein_coding|CODING|LOC_Os12g32040.1|4|1);LOF=(LOC_Os12g32040|LOC_Os12g32040|1|1.00) FN3968-S.SNP.12:19337855 chr12:019337855 0 W/19337855-19337855 FN3968-S SNP T -> G AC=1;AN=168;BQB=0.99543;DP=2325;DP4=1122,1076,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.83255e-06;MQSB=0.970353;RPB=0.942613;SGB=38.1788;VDB=0.605471;EFF=INTERGENIC(MODIFIER||||||||||1) FN2599-S.SNP.12:19338064 chr12:019338064 0 W/19338064-19338064 FN2599-S SNP T -> C AC=1;AN=198;BQB=0.877608;DP=4245;DP4=1844,2124,9,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02916e-09;MQSB=0.998871;RPB=0.949195;SGB=43.7442;VDB=0.0574696;EFF=INTERGENIC(MODIFIER||||||||||1) FN3819-S.SNP.12:19347115 chr12:019347115 0 W/19347115-19347115 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.980501;DP=3121;DP4=1162,1816,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.53908e-07;MQSB=0.919737;RPB=0.961271;SGB=25.439;VDB=0.0785211;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.12:19354305 chr12:019354305 0 W/19354305-19354305 FN1263-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g32080 expressed protein SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN540-S.SNP.12:19358582 chr12:019358582 0 W/19358582-19358582 FN540-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g32090 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN435-S.SNP.12:19360825 chr12:019360825 0 W/19360825-19360825 FN435-S Single Base Substitution C-A INTERGENIC HET SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN1301-S.SNP.12:19361709 chr12:019361709 0 W/19361709-19361709 FN1301-S Single Base Substitution T-C INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1523-S.SNP.12:19362790 chr12:019362790 0 W/19362790-19362790 FN1523-S Single Base Substitution G-T INTERGENIC HET SNo: 1275, Mutant_ID: FN1523-S, Generation: M2, Mutations: 71, Genes: 20, Seed availability: Yes. FN-333.SNP.12:19366720 chr12:019366720 0 W/19366720-19366720 FN-333 Single Base Substitution G-C INTERGENIC HOMO SNo: 325, Mutant_ID: FN-333, Generation: M2, Mutations: 33, Genes: 60, Seed availability: Yes. FN781-S.SNP.12:19368163 chr12:019368163 0 W/19368163-19368163 FN781-S Single Base Substitution C-T INTERGENIC HET SNo: 702, Mutant_ID: FN781-S, Generation: M2, Mutations: 56, Genes: 32, Seed availability: Yes. FN869-S.SNP.12:19375534 chr12:019375534 0 W/19375534-19375534 FN869-S Single Base Substitution G-C INTRON HET SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN3527-S.SNP.12:19375616 chr12:019375616 0 W/19375616-19375616 FN3527-S SNP C -> T AC=1;AN=188;BQB=0.994776;DP=2812;DP4=1374,1306,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.31023e-06;MQSB=0.948537;RPB=0.980996;SGB=35.3493;VDB=0.435726;EFF=INTRON(MODIFIER||||1014|LOC_Os12g32120|protein_coding|CODING|LOC_Os12g32120.1|1|1) FN594-S.SNP.12:19375616 chr12:019375616 0 W/19375616-19375616 FN594-S Single Base Substitution C-T INTRON HOMO SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN2335.SNP.12:19376587 chr12:019376587 0 W/19376587-19376587 FN2335 SNP G -> A AC=1;AN=192;BQB=0.436954;DP=4622;DP4=2171,2141,11,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.15421e-10;MQSB=0.482496;RPB=0.539912;SGB=86.1165;VDB=0.512684;EFF=INTERGENIC(MODIFIER||||||||||1) FN1697-S.SNP.12:19383942 chr12:019383942 0 W/19383942-19383942 FN1697-S SNP G -> T AC=1;AN=188;BQB=0.999769;DP=3895;DP4=2038,1812,13,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000256739;MQB=1.02316e-11;MQSB=2.3807e-31;RPB=0.256816;SGB=43.8792;VDB=0.0867092;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cta/Ata|L739I|744|LOC_Os12g32140|protein_coding|CODING|LOC_Os12g32140.1|6|1) FN1697-S.SNP.12:19383943 chr12:019383943 0 W/19383943-19383943 FN1697-S SNP G -> T AC=1;AN=188;BQB=0.148515;DP=3894;DP4=2029,1808,22,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000256805;MQB=2.96498e-10;MQSB=4.78697e-30;RPB=0.905811;SGB=-225.535;VDB=0.671773;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgC/cgA|R738|744|LOC_Os12g32140|protein_coding|CODING|LOC_Os12g32140.1|6|1) FN1697-S.SNP.12:19383944 chr12:019383944 0 W/19383944-19383944 FN1697-S SNP C -> T AC=1;AN=188;BQB=0.00981277;DP=3888;DP4=2022,1806,20,14;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.000257202;MQB=1.00519e-09;MQSB=2.54598e-28;RPB=0.444038;SGB=-313.524;VDB=0.288929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGc/cAc|R738H|744|LOC_Os12g32140|protein_coding|CODING|LOC_Os12g32140.1|6|1) FN1014-S.SNP.12:19385832 chr12:019385832 0 W/19385832-19385832 FN1014-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g32140 transposon protein, putative, unclassified, expressed SNo: 913, Mutant_ID: FN1014-S, Generation: M2, Mutations: 82, Genes: 147, Seed availability: Yes. FN1638-S.SNP.12:19386657 chr12:019386657 0 W/19386657-19386657 FN1638-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN2792-S.SNP.12:19389575 chr12:019389575 0 W/19389575-19389575 FN2792-S SNP T -> A AC=2;AN=198;BQB=0.572783;DP=4520;DP4=2345,1962,28,16;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0.000221239;MQB=5.58536e-21;MQSB=0.993464;RPB=0.777011;SGB=2.23246;VDB=0.403853;EFF=INTERGENIC(MODIFIER||||||||||1) FN2202-S.SNP.12:19390280 chr12:019390280 0 W/19390280-19390280 FN2202-S SNP C -> A AC=1;AN=190;BQB=0.786461;DP=4306;DP4=1645,2346,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.71046e-11;MQSB=0.901047;RPB=0.537185;SGB=38.983;VDB=0.705686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2381.SNP.12:19390573 chr12:019390573 0 W/19390573-19390573 FN2381 SNP G -> T AC=1;AN=192;BQB=0.670495;DP=4492;DP4=2301,1931,11,2;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000222618;MQB=4.01942e-08;MQSB=0.999994;RPB=0.967284;SGB=36.2157;VDB=0.541747;EFF=INTERGENIC(MODIFIER||||||||||1) FN554-S.SNP.12:19395618 chr12:019395618 0 W/19395618-19395618 FN554-S Single Base Substitution C-A INTERGENIC HET SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1482-S.SNP.12:19401083 chr12:019401083 0 W/19401083-19401083 FN1482-S Single Base Substitution T-C INTERGENIC HET SNo: 1246, Mutant_ID: FN1482-S, Generation: M2, Mutations: 70, Genes: 27, Seed availability: Yes. FN2711-S.SNP.12:19407505 chr12:019407505 0 W/19407505-19407505 FN2711-S SNP A -> C AC=1;AN=200;BQB=0.335185;DP=5087;DP4=2236,2620,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.24301e-12;MQSB=0.90129;RPB=0.507729;SGB=50.3263;VDB=0.984189;EFF=INTRON(MODIFIER||||382|LOC_Os12g32160|protein_coding|CODING|LOC_Os12g32160.1|1|1) FN1270-S.SNP.12:19407658 chr12:019407658 0 W/19407658-19407658 FN1270-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g32160 expressed protein SNo: 1084, Mutant_ID: FN1270-S, Generation: M2, Mutations: 62, Genes: 19, Seed availability: Yes. FN4143-S.SNP.12:19412064 chr12:019412064 0 W/19412064-19412064 FN4143-S SNP G -> A AC=1;AN=170;BQB=0.731373;DP=2272;DP4=1112,985,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=9.41865e-07;MQSB=0.965722;RPB=0.986698;SGB=19.8839;VDB=0.842563;EFF=INTERGENIC(MODIFIER||||||||||1) FN1309-S.SNP.12:19421957 chr12:019421957 0 W/19421957-19421957 FN1309-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1114, Mutant_ID: FN1309-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN1515-S.SNP.12:19421957 chr12:019421957 0 W/19421957-19421957 FN1515-S Single Base Substitution C-T INTERGENIC Homo SNo: 1268, Mutant_ID: FN1515-S, Generation: M2, Mutations: 98, Genes: 15, Seed availability: Yes. FN2157-S.SNP.12:19421957 chr12:019421957 0 W/19421957-19421957 FN2157-S SNP C -> T AC=2;AN=168;BQB=0.433187;DP=3023;DP4=1467,1517,18,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.27726e-13;MQSB=0.844373;RPB=0.293781;SGB=-9.7719;VDB=0.158222;EFF=INTERGENIC(MODIFIER||||||||||1) FN343-S.SNP.12:19422358 chr12:019422358 0 W/19422358-19422358 FN343-S Single Base Substitution A-G INTERGENIC HET SNo: 334, Mutant_ID: FN343-S, Generation: M2, Mutations: 82, Genes: 37, Seed availability: Yes. FN804-S.SNP.12:19430946 chr12:019430946 0 W/19430946-19430946 FN804-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN804-S.SNP.12:19430947 chr12:019430947 0 W/19430947-19430947 FN804-S Single Base Substitution A-T UTR_5_PRIME HOMO SNo: 722, Mutant_ID: FN804-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN553-S.SNP.12:19431769 chr12:019431769 0 W/19431769-19431769 FN553-S Single Base Substitution G-A INTERGENIC HET SNo: 548, Mutant_ID: FN553-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN3310-S.SNP.12:19434984 chr12:019434984 0 W/19434984-19434984 FN3310-S SNP T -> G AC=2;AN=184;BQB=0.857566;DP=2715;DP4=1244,1276,12,8;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.98563e-09;MQSB=0.73272;RPB=0.915291;SGB=60.4004;VDB=0.524808;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gGg|V155G|477|LOC_Os12g32200|protein_coding|CODING|LOC_Os12g32200.1|1|1) FN1430-S.SNP.12:19447421 chr12:019447421 0 W/19447421-19447421 FN1430-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN4049-S.SNP.12:19447421 chr12:019447421 0 W/19447421-19447421 FN4049-S SNP T -> A AC=2;AN=168;BQB=0.8221;DP=1280;DP4=1210,23,11,0;HOB=0.0235261;ICB=0.494119;MQ=32;MQ0F=0.00078125;MQB=0.998826;MQSB=0.158276;RPB=0.082863;SGB=43.3113;VDB=0.0132769;EFF=INTERGENIC(MODIFIER||||||||||1) FN673-S.SNP.12:19447421 chr12:019447421 0 W/19447421-19447421 FN673-S Single Base Substitution T-A INTERGENIC HET SNo: 609, Mutant_ID: FN673-S, Generation: M2, Mutations: 84, Genes: 38, Seed availability: Yes. FN885-S.SNP.12:19447421 chr12:019447421 0 W/19447421-19447421 FN885-S Single Base Substitution T-A INTERGENIC HOMO SNo: 791, Mutant_ID: FN885-S, Generation: M2, Mutations: 61, Genes: 15, Seed availability: Yes. FN808-S.SNP.12:19449523 chr12:019449523 0 W/19449523-19449523 FN808-S Single Base Substitution T-A INTERGENIC HET SNo: 726, Mutant_ID: FN808-S, Generation: M2, Mutations: 46, Genes: 11, Seed availability: Yes. FN-393.SNP.12:19459332 chr12:019459332 0 W/19459332-19459332 FN-393 Single Base Substitution G-A INTERGENIC HOMO SNo: 379, Mutant_ID: FN-393, Generation: M2, Mutations: 31, Genes: 6, Seed availability: Yes. FN2366.SNP.12:19460644 chr12:019460644 0 W/19460644-19460644 FN2366 SNP C -> T AC=2;AN=192;BQB=0.555407;DP=2761;DP4=749,1831,7,19;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0.000724375;MQB=6.53627e-08;MQSB=2.11996e-15;RPB=0.674236;SGB=51.9931;VDB=0.00707168;EFF=INTERGENIC(MODIFIER||||||||||1) FN-196.SNP.12:19467535 chr12:019467535 0 W/19467535-19467535 FN-196 Single Base Substitution C-T INTERGENIC HET SNo: 196, Mutant_ID: FN-196, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN_1017-1.SNP.12:19475166 chr12:019475166 0 W/19475166-19475166 FN_1017-1 Single Base Substitution T-C HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN4129-S.SNP.12:19475755 chr12:019475755 0 W/19475755-19475755 FN4129-S SNP T -> C AC=1;AN=182;BQB=0.904074;DP=2814;DP4=1361,1373,8,10;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0;MQB=5.81019e-07;MQSB=0.875096;RPB=0.59815;SGB=53.182;VDB=0.704323;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gCc|V302A|540|LOC_Os12g32250|protein_coding|CODING|LOC_Os12g32250.1|4|1) FN-332.SNP.12:19477213 chr12:019477213 0 W/19477213-19477213 FN-332 Single Base Substitution C-T INTRON HET SNo: 324, Mutant_ID: FN-332, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN2201-S.SNP.12:19477213 chr12:019477213 0 W/19477213-19477213 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.985035;DP=5020;DP4=2489,2262,26,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.284e-26;MQSB=0.985942;RPB=0.109037;SGB=105.384;VDB=0.306481;EFF=INTRON(MODIFIER||||540|LOC_Os12g32250|protein_coding|CODING|LOC_Os12g32250.1|5|1) FN2325.SNP.12:19487238 chr12:019487238 0 W/19487238-19487238 FN2325 SNP T -> G AC=1;AN=192;BQB=0.997851;DP=4908;DP4=2236,2386,12,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.17698e-12;MQSB=0.743645;RPB=0.48587;SGB=41.7357;VDB=0.581891;EFF=INTERGENIC(MODIFIER||||||||||1) FN1450-S.SNP.12:19488898 chr12:019488898 0 W/19488898-19488898 FN1450-S Single Base Substitution T-A INTRON HET SNo: 1220, Mutant_ID: FN1450-S, Generation: M2, Mutations: 90, Genes: 24, Seed availability: No. FN3523-S.SNP.12:19490215 chr12:019490215 0 W/19490215-19490215 FN3523-S SNP C -> G AC=1;AN=188;BQB=0.978496;DP=2746;DP4=1333,1329,2,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000244902;MQSB=0.986648;RPB=0.979881;SGB=21.722;VDB=0.479322;EFF=INTRON(MODIFIER||||158|LOC_Os12g32280|protein_coding|CODING|LOC_Os12g32280.1|1|1) FN-167.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN-167 Single Base Substitution G-T INTRON HOMO SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1623-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN1623-S Single Base Substitution G-T INTRON HET SNo: 1334, Mutant_ID: FN1623-S, Generation: M2, Mutations: 86, Genes: 26, Seed availability: Yes. FN2113-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN2113-S SNP G -> T AC=2;AN=168;BQB=0.749225;DP=4422;DP4=2306,2034,35,26;HOB=0.0235261;ICB=0.494119;MQ=40;MQ0F=0.0291723;MQB=0.00342341;MQSB=0.15127;RPB=0.978358;SGB=68.5775;VDB=0.25813;EFF=INTRON(MODIFIER||||858|LOC_Os12g32320|protein_coding|CODING|LOC_Os12g32320.1|4|1) FN3510-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN3510-S SNP G -> T AC=2;AN=188;BQB=0.615318;DP=2730;DP4=1353,1299,15,16;HOB=0.0210502;ICB=0.494738;MQ=46;MQ0F=0.0208791;MQB=7.1874e-09;MQSB=0.56354;RPB=0.591701;SGB=135.302;VDB=0.0462375;EFF=INTRON(MODIFIER||||858|LOC_Os12g32320|protein_coding|CODING|LOC_Os12g32320.1|4|1) FN456-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN456-S Single Base Substitution G-T INTRON HOMO SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. FN591-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN591-S Single Base Substitution G-T INTRON HOMO SNo: 576, Mutant_ID: FN591-S, Generation: M2, Mutations: 69, Genes: 184, Seed availability: Yes. FN837-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN837-S Single Base Substitution G-T INTRON HOMO SNo: 749, Mutant_ID: FN837-S, Generation: M2, Mutations: 74, Genes: 70, Seed availability: Yes. FN947-S.SNP.12:19509480 chr12:019509480 0 W/19509480-19509480 FN947-S Single Base Substitution G-T INTRON HET SNo: 853, Mutant_ID: FN947-S, Generation: M2, Mutations: 48, Genes: 48, Seed availability: Yes. FN3844-S.SNP.12:19516566 chr12:019516566 0 W/19516566-19516566 FN3844-S SNP G -> A AC=1;AN=190;BQB=0.832532;DP=2643;DP4=1131,1378,9,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.31569e-06;MQSB=0.999533;RPB=0.979992;SGB=1.00337;VDB=0.413129;EFF=INTRON(MODIFIER||||269|LOC_Os12g32330|protein_coding|CODING|LOC_Os12g32330.1|2|1) FN478-S.SNP.12:19516787 chr12:019516787 0 W/19516787-19516787 FN478-S Single Base Substitution C-T INTRON HET SNo: 477, Mutant_ID: FN478-S, Generation: M2, Mutations: 55, Genes: 9, Seed availability: Yes. FN1697-S.SNP.12:19520105 chr12:019520105 0 W/19520105-19520105 FN1697-S SNP A -> T AC=1;AN=188;BQB=0.000650035;DP=4219;DP4=2128,2019,14,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.32441e-09;MQSB=0.574006;RPB=0.99579;SGB=-115.921;VDB=0.894485;EFF=INTRON(MODIFIER||||155|LOC_Os12g32360|protein_coding|CODING|LOC_Os12g32360.1|1|1) FN3529-S.SNP.12:19521658 chr12:019521658 0 W/19521658-19521658 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.968416;DP=2899;DP4=1489,1349,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.63652e-05;MQSB=0.973234;RPB=0.501177;SGB=30.8063;VDB=0.700218;EFF=INTERGENIC(MODIFIER||||||||||1) FN3529-S.SNP.12:19521942 chr12:019521942 0 W/19521942-19521942 FN3529-S SNP A -> T AC=1;AN=188;BQB=0.961181;DP=2633;DP4=1195,1379,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.22473e-05;MQSB=0.983589;RPB=0.994123;SGB=21.8113;VDB=0.889084;EFF=INTERGENIC(MODIFIER||||||||||1) FN1288-S.SNP.12:19522499 chr12:019522499 0 W/19522499-19522499 FN1288-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN789-S.SNP.12:19524148 chr12:019524148 0 W/19524148-19524148 FN789-S Single Base Substitution G-A INTERGENIC HOMO SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN1551-S.SNP.12:19527811 chr12:019527811 0 W/19527811-19527811 FN1551-S Single Base Substitution C-T INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN4204-S.SNP.12:19532217 chr12:019532217 0 W/19532217-19532217 FN4204-S SNP C -> T AC=1;AN=170;BQB=0.839918;DP=2421;DP4=1147,1213,7,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.95921e-10;MQSB=0.984797;RPB=0.113075;SGB=32.0972;VDB=0.237135;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R150H|187|LOC_Os12g32374|protein_coding|CODING|LOC_Os12g32374.1|4|1) FN-125.SNP.12:19534080 chr12:019534080 0 W/19534080-19534080 FN-125 Single Base Substitution A-T INTRON HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN886-S.SNP.12:19541031 chr12:019541031 0 W/19541031-19541031 FN886-S Single Base Substitution T-C INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN3897-S.SNP.12:19543623 chr12:019543623 0 W/19543623-19543623 FN3897-S SNP A -> G AC=1;AN=158;BQB=0.83162;DP=2234;DP4=1127,1003,8,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=5.84642e-08;MQSB=0.98416;RPB=0.652693;SGB=64.5449;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.12:19545099 chr12:019545099 0 W/19545099-19545099 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN1421-S.SNP.12:19548045 chr12:019548045 0 W/19548045-19548045 FN1421-S Single Base Substitution T-C INTERGENIC HET SNo: 1196, Mutant_ID: FN1421-S, Generation: M2, Mutations: 67, Genes: 55, Seed availability: Yes. FN3360-S.SNP.12:19558701 chr12:019558701 0 W/19558701-19558701 FN3360-S SNP A -> G AC=2;AN=184;BQB=0.888788;DP=3882;DP4=1778,1910,20,25;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.88528e-26;MQSB=0.999193;RPB=0.84787;SGB=197.961;VDB=0.302579;EFF=INTRON(MODIFIER||||587|LOC_Os12g32430|protein_coding|CODING|LOC_Os12g32430.1|3|1) FN3915-S.SNP.12:19574496 chr12:019574496 0 W/19574496-19574496 FN3915-S SNP C -> T AC=1;AN=158;BQB=0.952439;DP=2043;DP4=797,1164,4,4;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=0.000310678;MQSB=0.978752;RPB=0.67979;SGB=17.2267;VDB=0.773897;EFF=INTRON(MODIFIER||||829|LOC_Os12g32440|protein_coding|CODING|LOC_Os12g32440.1|1|1) FN3514-S.SNP.12:19574981 chr12:019574981 0 W/19574981-19574981 FN3514-S SNP A -> T AC=1;AN=188;BQB=0.793269;DP=2990;DP4=1670,1201,6,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.25537e-08;MQSB=0.992987;RPB=0.938474;SGB=2.45162;VDB=0.27967;EFF=INTERGENIC(MODIFIER||||||||||1) FN-140.SNP.12:19577855 chr12:019577855 0 W/19577855-19577855 FN-140 Single Base Substitution C-A INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN-140.SNP.12:19577856 chr12:019577856 0 W/19577856-19577856 FN-140 Single Base Substitution C-A INTERGENIC HOMO SNo: 140, Mutant_ID: FN-140, Generation: M2, Mutations: 42, Genes: 7, Seed availability: Yes. FN-81.SNP.12:19579392 chr12:019579392 0 W/19579392-19579392 FN-81 Single Base Substitution T-C INTRON HET SNo: 81, Mutant_ID: FN-81, Generation: M2, Mutations: 56, Genes: 50, Seed availability: Yes. FN509-S.SNP.12:19580079 chr12:019580079 0 W/19580079-19580079 FN509-S Single Base Substitution A-T INTRON HET SNo: 507, Mutant_ID: FN509-S, Generation: M2, Mutations: 91, Genes: 70, Seed availability: Yes. FN875-S.SNP.12:19583802 chr12:019583802 0 W/19583802-19583802 FN875-S Single Base Substitution C-G INTRON HOMO SNo: 781, Mutant_ID: FN875-S, Generation: M2, Mutations: 61, Genes: 17, Seed availability: Yes. FN3283-S.SNP.12:19590916 chr12:019590916 0 W/19590916-19590916 FN3283-S SNP C -> T AC=2;AN=184;BQB=0.664082;DP=3403;DP4=1471,1728,11,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.34941e-14;MQSB=0.85555;RPB=0.941291;SGB=63.6237;VDB=0.0551672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3516-S.SNP.12:19599944 chr12:019599944 0 W/19599944-19599944 FN3516-S SNP C -> T AC=1;AN=188;BQB=0.983398;DP=2519;DP4=1269,1180,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.01303e-07;MQSB=0.998399;RPB=0.981118;SGB=39.8925;VDB=0.737658;EFF=INTRON(MODIFIER||||183|LOC_Os12g32470|protein_coding|CODING|LOC_Os12g32470.1|4|1) FN776-S.SNP.12:19614822 chr12:019614822 0 W/19614822-19614822 FN776-S Single Base Substitution C-T INTRON HET SNo: 697, Mutant_ID: FN776-S, Generation: M2, Mutations: 63, Genes: 10, Seed availability: Yes. FN2358.SNP.12:19625293 chr12:019625293 0 W/19625293-19625293 FN2358 SNP G -> T AC=2;AN=192;BQB=0.997989;DP=4810;DP4=2152,2376,15,19;HOB=0.0206163;ICB=0.494846;MQ=47;MQ0F=0;MQB=1.65758e-12;MQSB=0.0882154;RPB=0.956198;SGB=33.9487;VDB=0.711713;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.12:19633101 chr12:019633101 0 W/19633101-19633101 FN2479 SNP C -> T AC=2;AN=198;BQB=0.9838;DP=3191;DP4=1727,1149,16,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.217e-15;MQSB=0.000168006;RPB=0.543801;SGB=58.1418;VDB=0.0887264;EFF=INTERGENIC(MODIFIER||||||||||1) FN1652-S.SNP.12:19634794 chr12:019634794 0 W/19634794-19634794 FN1652-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN951-S.SNP.12:19642123 chr12:019642123 0 W/19642123-19642123 FN951-S Single Base Substitution G-T INTERGENIC HOMO SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3480-S.SNP.12:19660265 chr12:019660265 0 W/19660265-19660265 FN3480-S SNP G -> A AC=1;AN=184;BQB=0.458512;DP=3230;DP4=1872,1231,10,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.08634e-09;MQSB=0.349105;RPB=0.996693;SGB=98.4821;VDB=0.804383;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A28V|79|LOC_Os12g32580|protein_coding|CODING|LOC_Os12g32580.1|1|1) FN1467-S.SNP.12:19663106 chr12:019663106 0 W/19663106-19663106 FN1467-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1113-S.SNP.12:19669009 chr12:019669009 0 W/19669009-19669009 FN1113-S Single Base Substitution C-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN3050-S.SNP.12:19672306 chr12:019672306 0 W/19672306-19672306 FN3050-S SNP T -> C AC=1;AN=184;BQB=0.974194;DP=2930;DP4=1156,1618,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.37895e-06;MQSB=0.977416;RPB=0.813383;SGB=39.2697;VDB=0.867348;EFF=INTRON(MODIFIER||||196|LOC_Os12g32600|protein_coding|CODING|LOC_Os12g32600.1|5|1) FN678-S.SNP.12:19677644 chr12:019677644 0 W/19677644-19677644 FN678-S Single Base Substitution A-G INTERGENIC HET SNo: 611, Mutant_ID: FN678-S, Generation: M2, Mutations: 76, Genes: 31, Seed availability: Yes. FN3809-S.SNP.12:19685250 chr12:019685250 0 W/19685250-19685250 FN3809-S SNP C -> T AC=2;AN=190;BQB=0.984877;DP=2623;DP4=1328,1220,9,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.91105e-14;MQSB=0.927307;RPB=0.999993;SGB=94.6341;VDB=0.490153;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gat/Aat|D356N|399|LOC_Os12g32630|protein_coding|CODING|LOC_Os12g32630.1|2|1),UTR_3_PRIME(MODIFIER||1574||311|LOC_Os12g32630|protein_coding|CODING|LOC_Os12g32630.2|2|1) FN1368-S.SNP.12:19693346 chr12:019693346 0 W/19693346-19693346 FN1368-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3978-S.SNP.12:19693346 chr12:019693346 0 W/19693346-19693346 FN3978-S SNP A -> T AC=1;AN=168;BQB=0.61274;DP=2890;DP4=1371,1423,8,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.0467e-08;MQSB=0.0019511;RPB=0.258441;SGB=-14.5109;VDB=0.348672;EFF=INTERGENIC(MODIFIER||||||||||1) FN3522-S.SNP.12:19697356 chr12:019697356 0 W/19697356-19697356 FN3522-S SNP T -> C AC=1;AN=186;BQB=0.971434;DP=3259;DP4=2101,945,16,4;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.36778e-12;MQSB=0.644129;RPB=0.938745;SGB=-12.8266;VDB=0.828674;EFF=INTRON(MODIFIER||||418|LOC_Os12g32640|protein_coding|CODING|LOC_Os12g32640.1|2|1) FN-221.SNP.12:19698717 chr12:019698717 0 W/19698717-19698717 FN-221 Single Base Substitution T-A INTERGENIC HOMO SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN2463.SNP.12:19709509 chr12:019709509 0 W/19709509-19709509 FN2463 SNP A -> G AC=1;AN=198;BQB=0.847289;DP=4234;DP4=2031,1962,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.14748e-06;MQSB=0.972042;RPB=0.489587;SGB=49.6594;VDB=0.178358;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D62|1271|LOC_Os12g32660|protein_coding|CODING|LOC_Os12g32660.2|1|1),SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D62|1271|LOC_Os12g32660|protein_coding|CODING|LOC_Os12g32660.1|1|1) FN1483-S.SNP.12:19710876 chr12:019710876 0 W/19710876-19710876 FN1483-S Single Base Substitution T-C INTERGENIC HET SNo: 1247, Mutant_ID: FN1483-S, Generation: M2, Mutations: 94, Genes: 141, Seed availability: Yes. FN540-S.SNP.12:19713529 chr12:019713529 0 W/19713529-19713529 FN540-S Single Base Substitution G-A INTERGENIC HOMO SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN4178-S.SNP.12:19716697 chr12:019716697 0 W/19716697-19716697 FN4178-S SNP A -> G AC=2;AN=170;BQB=0.994334;DP=2457;DP4=1133,1177,12,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.19107e-16;MQSB=0.985328;RPB=0.914794;SGB=86.5178;VDB=0.430035;EFF=UTR_3_PRIME(MODIFIER||1009||493|LOC_Os12g32670|protein_coding|CODING|LOC_Os12g32670.1|2|1) FN2298.SNP.12:19717377 chr12:019717377 0 W/19717377-19717377 FN2298 SNP G -> A AC=1;AN=192;BQB=0.415659;DP=5155;DP4=2497,2373,13,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.83973e-15;MQSB=0.966635;RPB=0.0308434;SGB=26.127;VDB=0.074863;EFF=UTR_3_PRIME(MODIFIER||329||493|LOC_Os12g32670|protein_coding|CODING|LOC_Os12g32670.1|2|1) FN2243-S.SNP.12:19720523 chr12:019720523 0 W/19720523-19720523 FN2243-S SNP T -> C AC=1;AN=190;BQB=0.469847;DP=5241;DP4=2325,2613,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.79835e-06;MQSB=0.869096;RPB=0.892162;SGB=35.4339;VDB=0.126223;EFF=INTERGENIC(MODIFIER||||||||||1) FN1465-S.SNP.12:19722547 chr12:019722547 0 W/19722547-19722547 FN1465-S Single Base Substitution C-G INTERGENIC HET SNo: 1233, Mutant_ID: FN1465-S, Generation: M2, Mutations: 93, Genes: 53, Seed availability: No. FN4116-S.SNP.12:19723919 chr12:019723919 0 W/19723919-19723919 FN4116-S SNP G -> A AC=1;AN=182;BQB=0.992174;DP=3073;DP4=1626,1351,7,10;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.32889e-09;MQSB=0.963239;RPB=0.763722;SGB=71.1765;VDB=0.715252;EFF=INTERGENIC(MODIFIER||||||||||1) FN3394-S.SNP.12:19728029 chr12:019728029 0 W/19728029-19728029 FN3394-S SNP C -> T AC=1;AN=184;BQB=0.780101;DP=3176;DP4=1658,1340,6,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.42445e-07;MQSB=0.991128;RPB=0.777233;SGB=23.2751;VDB=0.51048;EFF=INTERGENIC(MODIFIER||||||||||1) FN3971-S.SNP.12:19728619 chr12:019728619 0 W/19728619-19728619 FN3971-S SNP A -> T AC=1;AN=168;BQB=0.846269;DP=2735;DP4=1296,1313,2,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.73909e-05;MQSB=0.816454;RPB=0.715116;SGB=24.4556;VDB=0.0199125;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.12:19732957 chr12:019732957 0 W/19732957-19732957 FN-350 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g32680 NB-ARC domain containing protein, expressed SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN2296.SNP.12:19740441 chr12:019740441 0 W/19740441-19740441 FN2296 SNP T -> A AC=2;AN=192;BQB=0.286665;DP=5100;DP4=2396,2438,25,8;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.31371e-18;MQSB=0.994395;RPB=0.616552;SGB=145.062;VDB=0.307912;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ata/Tta|I542L|1312|LOC_Os12g32690|protein_coding|CODING|LOC_Os12g32690.1|5|1) FN1284-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN1284-S Single Base Substitution G-A INTRON HOMO SNo: 1098, Mutant_ID: FN1284-S, Generation: M2, Mutations: 78, Genes: 20, Seed availability: Yes. FN3295-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN3295-S SNP G -> A AC=1;AN=184;BQB=0.95589;DP=2948;DP4=1485,1381,6,2;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.00135685;MQB=0.000252506;MQSB=0.00404077;RPB=0.954347;SGB=30.6558;VDB=0.452509;EFF=INTRON(MODIFIER||||1312|LOC_Os12g32690|protein_coding|CODING|LOC_Os12g32690.1|2|1) FN3503-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN3503-S SNP G -> A AC=1;AN=188;BQB=0.956306;DP=2763;DP4=1439,1271,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0.0014477;MQB=0.000260328;MQSB=0.00492174;RPB=0.763744;SGB=25.3545;VDB=0.332598;EFF=INTRON(MODIFIER||||1312|LOC_Os12g32690|protein_coding|CODING|LOC_Os12g32690.1|2|1) FN3956-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN3956-S SNP G -> A AC=2;AN=168;BQB=0.884025;DP=2764;DP4=1408,1249,14,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0.00144718;MQB=9.51347e-10;MQSB=0.00216744;RPB=0.942607;SGB=105.343;VDB=0.263565;EFF=INTRON(MODIFIER||||1312|LOC_Os12g32690|protein_coding|CODING|LOC_Os12g32690.1|2|1) FN4088-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN4088-S SNP G -> A AC=1;AN=182;BQB=0.814179;DP=3057;DP4=1501,1488,6,7;HOB=6.03792e-05;ICB=0.000121422;MQ=48;MQ0F=0.00130847;MQB=4.66921e-05;MQSB=0.00801731;RPB=0.790539;SGB=53.1331;VDB=0.932042;EFF=INTRON(MODIFIER||||1312|LOC_Os12g32690|protein_coding|CODING|LOC_Os12g32690.1|2|1) FN449-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN449-S Single Base Substitution G-A INTRON HOMO SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN521-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN521-S Single Base Substitution G-A INTRON HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN588-S.SNP.12:19741952 chr12:019741952 0 W/19741952-19741952 FN588-S Single Base Substitution G-A INTRON HOMO SNo: 573, Mutant_ID: FN588-S, Generation: M2, Mutations: 71, Genes: 9, Seed availability: Yes. FN1531-S.SNP.12:19746825 chr12:019746825 0 W/19746825-19746825 FN1531-S Single Base Substitution A-T INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1531-S.SNP.12:19746826 chr12:019746826 0 W/19746826-19746826 FN1531-S Single Base Substitution A-T INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN2128-S.SNP.12:19746886 chr12:019746886 0 W/19746886-19746886 FN2128-S SNP A -> G AC=1;AN=168;BQB=0.00345777;DP=3982;DP4=1964,1967,20,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.34206e-12;MQSB=0.963971;RPB=0.987958;SGB=-222.321;VDB=0.0628685;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.12:19758060 chr12:019758060 0 W/19758060-19758060 FN901-S Single Base Substitution T-C INTERGENIC HOMO SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN3697-S.SNP.12:19759058 chr12:019759058 0 W/19759058-19759058 FN3697-S SNP C -> T AC=1;AN=190;BQB=0.913633;DP=2340;DP4=1192,1019,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.63475e-06;MQSB=0.347941;RPB=0.599898;SGB=39.9877;VDB=0.803036;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.12:19759394 chr12:019759394 0 W/19759394-19759394 FN3796-S SNP C -> A AC=2;AN=190;BQB=0.914905;DP=2707;DP4=1040,1565,11,12;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.87866e-13;MQSB=0.999741;RPB=0.284635;SGB=44.0907;VDB=0.873059;EFF=INTERGENIC(MODIFIER||||||||||1) FN3796-S.SNP.12:19759395 chr12:019759395 0 W/19759395-19759395 FN3796-S SNP C -> T AC=2;AN=190;BQB=0.945305;DP=2705;DP4=1016,1557,11,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.16182e-12;MQSB=0.999752;RPB=0.950563;SGB=64.5316;VDB=0.910828;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.12:19760294 chr12:019760294 0 W/19760294-19760294 FN3979-S SNP T -> A AC=1;AN=168;BQB=0.606101;DP=2684;DP4=1345,1254,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.37307e-10;MQSB=0.99622;RPB=0.902134;SGB=65.4653;VDB=0.358529;EFF=INTERGENIC(MODIFIER||||||||||1) FN3979-S.SNP.12:19760295 chr12:019760295 0 W/19760295-19760295 FN3979-S SNP G -> A AC=1;AN=168;BQB=0.969486;DP=2692;DP4=1340,1257,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.37134e-10;MQSB=0.984576;RPB=0.862327;SGB=65.4653;VDB=0.345082;EFF=INTERGENIC(MODIFIER||||||||||1) FN3857-S.SNP.12:19760487 chr12:019760487 0 W/19760487-19760487 FN3857-S SNP T -> C AC=1;AN=158;BQB=0.981951;DP=2457;DP4=1301,1081,10,5;HOB=8.01154e-05;ICB=0.000161245;MQ=47;MQ0F=0;MQB=1.97514e-07;MQSB=0.859902;RPB=0.493763;SGB=60.1755;VDB=0.172119;EFF=INTERGENIC(MODIFIER||||||||||1) FN2359.SNP.12:19765499 chr12:019765499 0 W/19765499-19765499 FN2359 SNP G -> A AC=1;AN=192;BQB=0.3036;DP=4625;DP4=2096,2204,5,12;HOB=5.42535e-05;ICB=0.000109072;MQ=43;MQ0F=0.00605405;MQB=0.00139309;MQSB=0;RPB=0.784636;SGB=28.9139;VDB=0.373721;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccC/ccT|P660|957|LOC_Os12g32720|protein_coding|CODING|LOC_Os12g32720.1|3|1) FN803-S.SNP.12:19767381 chr12:019767381 0 W/19767381-19767381 FN803-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g32720 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 721, Mutant_ID: FN803-S, Generation: M2, Mutations: 48, Genes: 21, Seed availability: Yes. FN2532-S.SNP.12:19769488 chr12:019769488 0 W/19769488-19769488 FN2532-S SNP C -> T AC=1;AN=198;BQB=0.422054;DP=2337;DP4=1743,389,17,3;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00342319;MQB=1.3869e-06;MQSB=1.0508e-21;RPB=0.615723;SGB=37.1297;VDB=0.401719;EFF=INTERGENIC(MODIFIER||||||||||1) FN1211-S.SNP.12:19773272 chr12:019773272 0 W/19773272-19773272 FN1211-S Single Base Substitution C-G INTERGENIC HET SNo: 1040, Mutant_ID: FN1211-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN1682-S.SNP.12:19777964 chr12:019777964 0 W/19777964-19777964 FN1682-S SNP G -> A AC=1;AN=188;BQB=0.21946;DP=3134;DP4=1426,1618,15,17;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.156669;MQB=0.566442;MQSB=0;RPB=0.999753;SGB=-188.997;VDB=0.883418;EFF=INTERGENIC(MODIFIER||||||||||1) FN2617-S.SNP.12:19780626 chr12:019780626 0 W/19780626-19780626 FN2617-S SNP T -> C AC=2;AN=198;BQB=0.999115;DP=4066;DP4=1934,1917,23,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.11803e-23;MQSB=0.992314;RPB=0.747089;SGB=96.8175;VDB=0.79007;EFF=INTRON(MODIFIER||||448|LOC_Os12g32750|protein_coding|CODING|LOC_Os12g32750.1|1|1) FN3766-S.SNP.12:19782229 chr12:019782229 0 W/19782229-19782229 FN3766-S SNP A -> G AC=2;AN=190;BQB=0.821815;DP=2015;DP4=1149,741,12,5;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.99474e-10;MQSB=0.131187;RPB=0.965436;SGB=71.8647;VDB=0.0263663;EFF=INTRON(MODIFIER||||448|LOC_Os12g32750|protein_coding|CODING|LOC_Os12g32750.1|2|1) FN-251.SNP.12:19782247 chr12:019782247 0 W/19782247-19782247 FN-251 Single Base Substitution A-G INTRON HOMO SNo: 250, Mutant_ID: FN-251, Generation: M2, Mutations: 62, Genes: 128, Seed availability: Yes. FN2704-S.SNP.12:19791551 chr12:019791551 0 W/19791551-19791551 FN2704-S SNP T -> A AC=1;AN=200;BQB=0.183657;DP=4382;DP4=1962,2205,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.837e-08;MQSB=0.865887;RPB=0.236368;SGB=24.2746;VDB=0.360072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1707-S.SNP.12:19792060 chr12:019792060 0 W/19792060-19792060 FN1707-S SNP G -> A AC=1;AN=188;BQB=0.124065;DP=3393;DP4=2064,1274,11,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.97499e-06;MQSB=0.984929;RPB=0.69379;SGB=-117.892;VDB=0.250584;EFF=UTR_5_PRIME(MODIFIER||76||136|LOC_Os12g32770|protein_coding|CODING|LOC_Os12g32770.1|1|1) FN1707-S.SNP.12:19792104 chr12:019792104 0 W/19792104-19792104 FN1707-S SNP T -> A AC=1;AN=188;BQB=0.627339;DP=3466;DP4=2056,1361,10,10;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00259665;MQB=9.59686e-07;MQSB=0.0459104;RPB=0.857831;SGB=11.7114;VDB=0.790722;EFF=UTR_5_PRIME(MODIFIER||32||136|LOC_Os12g32770|protein_coding|CODING|LOC_Os12g32770.1|1|1) FN533-S.SNP.12:19798007 chr12:019798007 0 W/19798007-19798007 FN533-S Single Base Substitution C-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. W252-6-1.SNP.12:19800443 chr12:019800443 0 W/19800443-19800443 W252-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN-162.SNP.12:19804315 chr12:019804315 0 W/19804315-19804315 FN-162 Single Base Substitution G-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN-278.SNP.12:19808219 chr12:019808219 0 W/19808219-19808219 FN-278 Single Base Substitution A-G UTR_3_PRIME HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN-278.SNP.12:19808277 chr12:019808277 0 W/19808277-19808277 FN-278 Single Base Substitution C-T UTR_3_PRIME HOMO SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN2084-S.SNP.12:19808277 chr12:019808277 0 W/19808277-19808277 FN2084-S SNP C -> T AC=2;AN=168;BQB=0.648711;DP=2325;DP4=1938,363,16,0;HOB=0.0235261;ICB=0.494119;MQ=42;MQ0F=0.00301075;MQB=0.00349298;MQSB=0;RPB=0.119218;SGB=4.1907;VDB=0.36192;EFF=UTR_3_PRIME(MODIFIER||928||431|LOC_Os12g32790|protein_coding|CODING|LOC_Os12g32790.1|1|1) FN3558-S.SNP.12:19809794 chr12:019809794 0 W/19809794-19809794 FN3558-S SNP T -> C AC=2;AN=188;BQB=0.961456;DP=2886;DP4=1419,1303,12,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.13273e-13;MQSB=0.749018;RPB=0.792018;SGB=89.1337;VDB=0.726161;EFF=INTERGENIC(MODIFIER||||||||||1) FN2309.SNP.12:19813272 chr12:019813272 0 W/19813272-19813272 FN2309 SNP C -> G AC=1;AN=192;BQB=0.0669662;DP=3122;DP4=1649,781,13,14;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0;MQB=1.78098e-05;MQSB=0.00460477;RPB=0.114478;SGB=-229.475;VDB=0.162074;EFF=INTERGENIC(MODIFIER||||||||||1) FN457-S.SNP.12:19817785 chr12:019817785 0 W/19817785-19817785 FN457-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g32800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 456, Mutant_ID: FN457-S, Generation: M2, Mutations: 69, Genes: 75, Seed availability: Yes. FN3294-S.SNP.12:19825173 chr12:019825173 0 W/19825173-19825173 FN3294-S SNP G -> A AC=2;AN=184;BQB=0.967882;DP=2851;DP4=1329,1419,19,16;HOB=0.0215028;ICB=0.494625;MQ=43;MQ0F=0.0147317;MQB=0.0852454;MQSB=0.0662123;RPB=0.944926;SGB=113.227;VDB=0.86287;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.12:19827498 chr12:019827498 0 W/19827498-19827498 FN-82 Single Base Substitution G-A INTERGENIC HET SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN2785-S.SNP.12:19828183 chr12:019828183 0 W/19828183-19828183 FN2785-S SNP T -> A AC=1;AN=198;BQB=0.999973;DP=4060;DP4=1972,1900,6,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.56626e-14;MQSB=0.996351;RPB=0.511582;SGB=68.91;VDB=0.0348151;EFF=INTERGENIC(MODIFIER||||||||||1) FN1444-S.SNP.12:19830141 chr12:019830141 0 W/19830141-19830141 FN1444-S Single Base Substitution T-A SYNONYMOUS_CODING HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1203-S.SNP.12:19843113 chr12:019843113 0 W/19843113-19843113 FN1203-S Single Base Substitution G-A INTERGENIC HET SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN3514-S.SNP.12:19865987 chr12:019865987 0 W/19865987-19865987 FN3514-S SNP G -> A AC=1;AN=188;BQB=0.988854;DP=3264;DP4=1469,1711,15,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.05981e-13;MQSB=0.827532;RPB=0.525633;SGB=14.798;VDB=0.00064491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctt/Ttt|L227F|366|LOC_Os12g32870|protein_coding|CODING|LOC_Os12g32870.1|3|1) FN2439.SNP.12:19866439 chr12:019866439 0 W/19866439-19866439 FN2439 SNP C -> T AC=2;AN=200;BQB=0.0289533;DP=4246;DP4=2177,1820,9,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.34163e-13;MQSB=0.980315;RPB=0.641124;SGB=76.3213;VDB=0.582895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A176T|366|LOC_Os12g32870|protein_coding|CODING|LOC_Os12g32870.1|2|1) FN-98.SNP.12:19876000 chr12:019876000 0 W/19876000-19876000 FN-98 Single Base Substitution A-C INTERGENIC HET SNo: 98, Mutant_ID: FN-98, Generation: M2, Mutations: 35, Genes: 10, Seed availability: Yes. FN-78.SNP.12:19886620 chr12:019886620 0 W/19886620-19886620 FN-78 Single Base Substitution G-A INTERGENIC HET SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN-110.SNP.12:19893829 chr12:019893829 0 W/19893829-19893829 FN-110 Single Base Substitution T-A INTERGENIC HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN4179-S.SNP.12:19896873 chr12:019896873 0 W/19896873-19896873 FN4179-S SNP A -> T AC=1;AN=170;BQB=0.857799;DP=2354;DP4=992,1254,5,13;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.11395e-11;MQSB=0.913293;RPB=0.846281;SGB=52.0913;VDB=0.973367;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tcg/Acg|S440T|487|LOC_Os12g32940|protein_coding|CODING|LOC_Os12g32940.1|3|1) FN910-S.SNP.12:19898385 chr12:019898385 0 W/19898385-19898385 FN910-S Single Base Substitution A-C INTRON HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN-203.SNP.12:19900051 chr12:019900051 0 W/19900051-19900051 FN-203 Single Base Substitution G-A INTERGENIC HOMO SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN-203.SNP.12:19900052 chr12:019900052 0 W/19900052-19900052 FN-203 Single Base Substitution G-A INTERGENIC HOMO SNo: 203, Mutant_ID: FN-203, Generation: M2, Mutations: 54, Genes: 64, Seed availability: Yes. FN_777-2-1.SNP.12:19914170 chr12:019914170 0 W/19914170-19914170 FN_777-2-1 Single Base Substitution C-T HET SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN-68.SNP.12:19916548 chr12:019916548 0 W/19916548-19916548 FN-68 Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g32980 potyvirus VPg interacting protein, putative, expressed SNo: 68, Mutant_ID: FN-68, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN2442.SNP.12:19920407 chr12:019920407 0 W/19920407-19920407 FN2442 SNP T -> C AC=2;AN=200;BQB=0.850345;DP=4169;DP4=2137,1589,15,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.25066e-14;MQSB=0.977935;RPB=0.0521226;SGB=28.752;VDB=0.242394;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.12:19921218 chr12:019921218 0 W/19921218-19921218 FN812-S Single Base Substitution T-A INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1730-S.SNP.12:19926937 chr12:019926937 0 W/19926937-19926937 FN1730-S SNP A -> G AC=1;AN=188;BQB=0.10794;DP=3124;DP4=1460,1629,9,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.83365e-05;MQSB=0.977243;RPB=0.660004;SGB=-14.9998;VDB=0.00157098;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D100|811|LOC_Os12g32986|protein_coding|CODING|LOC_Os12g32986.1|2|1) FN1478-S.SNP.12:19927565 chr12:019927565 0 W/19927565-19927565 FN1478-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1243, Mutant_ID: FN1478-S, Generation: M2, Mutations: 89, Genes: 75, Seed availability: No. FN2542-S.SNP.12:19935426 chr12:019935426 0 W/19935426-19935426 FN2542-S SNP C -> T AC=1;AN=198;BQB=0.420371;DP=2480;DP4=732,1554,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.67274e-05;MQSB=0.0325642;RPB=0.968968;SGB=13.7737;VDB=0.672885;EFF=INTERGENIC(MODIFIER||||||||||1) FN1237-S.SNP.12:19945007 chr12:019945007 0 W/19945007-19945007 FN1237-S Single Base Substitution C-T INTRON HET SNo: 1061, Mutant_ID: FN1237-S, Generation: M2, Mutations: 85, Genes: 128, Seed availability: Yes. FN3843-S.SNP.12:19945050 chr12:019945050 0 W/19945050-19945050 FN3843-S SNP C -> A AC=1;AN=190;BQB=0.445849;DP=2472;DP4=1058,1324,3,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.07449e-06;MQSB=0.997803;RPB=0.979468;SGB=36.1006;VDB=0.83934;EFF=INTRON(MODIFIER||||605|LOC_Os12g33010|protein_coding|CODING|LOC_Os12g33010.1|6|1) FN2608-S.SNP.12:19955582 chr12:019955582 0 W/19955582-19955582 FN2608-S SNP C -> T AC=1;AN=198;BQB=0.558286;DP=4004;DP4=1928,1898,7,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.09159e-08;MQSB=0.820965;RPB=0.560704;SGB=36.5539;VDB=0.0917102;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.12:19955795 chr12:019955795 0 W/19955795-19955795 FN4187-S SNP T -> C AC=1;AN=170;BQB=0.770978;DP=2757;DP4=1433,1243,10,12;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.16134e-10;MQSB=0.668252;RPB=0.690778;SGB=92.2986;VDB=0.086711;EFF=INTERGENIC(MODIFIER||||||||||1) FN2749-S.SNP.12:19959223 chr12:019959223 0 W/19959223-19959223 FN2749-S SNP C -> G AC=1;AN=200;BQB=0.0795719;DP=4918;DP4=2338,2107,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.91258e-07;MQSB=0.788832;RPB=0.0877068;SGB=-14.9257;VDB=0.38995;EFF=INTRON(MODIFIER||||139|LOC_Os12g33040|protein_coding|CODING|LOC_Os12g33040.1|1|1) FN-246.SNP.12:19963046 chr12:019963046 0 W/19963046-19963046 FN-246 Single Base Substitution G-T INTERGENIC HET SNo: 245, Mutant_ID: FN-246, Generation: M2, Mutations: 76, Genes: 68, Seed availability: Yes. W22-2-1.SNP.12:19964313 chr12:019964313 0 W/19964313-19964313 W22-2-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1397, Mutant_ID: W22-2-1, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN1446-S.SNP.12:19964978 chr12:019964978 0 W/19964978-19964978 FN1446-S Single Base Substitution A-G INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN1556-S.SNP.12:19967854 chr12:019967854 0 W/19967854-19967854 FN1556-S Single Base Substitution G-A INTERGENIC HET SNo: 1301, Mutant_ID: FN1556-S, Generation: M2, Mutations: 87, Genes: 9, Seed availability: Yes. FN-268.SNP.12:19974819 chr12:019974819 0 W/19974819-19974819 FN-268 Single Base Substitution T-C INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-11.SNP.12:19977184 chr12:019977184 0 W/19977184-19977184 FN-11 Single Base Substitution G-A INTRON Homo SNo: 11, Mutant_ID: FN-11, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN-392.SNP.12:19977184 chr12:019977184 0 W/19977184-19977184 FN-392 Single Base Substitution G-A INTRON HOMO SNo: 378, Mutant_ID: FN-392, Generation: M2, Mutations: 61, Genes: 53, Seed availability: Yes. FN576-S.SNP.12:19977282 chr12:019977282 0 W/19977282-19977282 FN576-S Single Base Substitution A-G INTRON HET SNo: 565, Mutant_ID: FN576-S, Generation: M2, Mutations: 70, Genes: 35, Seed availability: Yes. FN1058-S.SNP.12:19978893 chr12:019978893 0 W/19978893-19978893 FN1058-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g33060 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3714-S.SNP.12:19983708 chr12:019983708 0 W/19983708-19983708 FN3714-S SNP G -> A AC=2;AN=190;BQB=0.704076;DP=3116;DP4=1569,1395,23,36;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.44125e-30;MQSB=0.86437;RPB=0.904062;SGB=257.584;VDB=0.241611;EFF=INTRON(MODIFIER||||855|LOC_Os12g33060|protein_coding|CODING|LOC_Os12g33060.1|14|1) FN2181-S.SNP.12:19989171 chr12:019989171 0 W/19989171-19989171 FN2181-S SNP A -> G AC=1;AN=190;BQB=0.425238;DP=4690;DP4=2220,2121,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.83698e-09;MQSB=0.232085;RPB=0.907526;SGB=46.7622;VDB=0.187308;EFF=INTERGENIC(MODIFIER||||||||||1) FN1103-S.SNP.12:19993687 chr12:019993687 0 W/19993687-19993687 FN1103-S Single Base Substitution T-A INTRON HET SNo: 978, Mutant_ID: FN1103-S, Generation: M2, Mutations: 76, Genes: 83, Seed availability: Yes. FN870-S.SNP.12:19998365 chr12:019998365 0 W/19998365-19998365 FN870-S Single Base Substitution A-C INTERGENIC HET SNo: 776, Mutant_ID: FN870-S, Generation: M2, Mutations: 73, Genes: 195, Seed availability: No. FN1472-S.SNP.12:20002300 chr12:020002300 0 W/20002300-20002300 FN1472-S Single Base Substitution G-A INTERGENIC HET SNo: 1238, Mutant_ID: FN1472-S, Generation: M2, Mutations: 99, Genes: 34, Seed availability: No. FN2091-S.SNP.12:20004164 chr12:020004164 0 W/20004164-20004164 FN2091-S SNP C -> T AC=2;AN=168;BQB=0.881978;DP=1783;DP4=581,1131,13,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.39299e-14;MQSB=0.349119;RPB=0.308587;SGB=51.3545;VDB=0.571002;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.12:20016157 chr12:020016157 0 W/20016157-20016157 FN3846-S SNP A -> G AC=1;AN=190;BQB=0.917113;DP=2806;DP4=1482,1181,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.45021e-11;MQSB=0.58763;RPB=0.689211;SGB=38.983;VDB=0.29098;EFF=INTERGENIC(MODIFIER||||||||||1) FN3527-S.SNP.12:20036151 chr12:020036151 0 W/20036151-20036151 FN3527-S SNP T -> C AC=1;AN=188;BQB=0.921756;DP=2506;DP4=1235,1191,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.56589e-05;MQSB=0.892716;RPB=0.860867;SGB=39.8925;VDB=0.379326;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.12:20037888 chr12:020037888 0 W/20037888-20037888 FN-233 Single Base Substitution A-G INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3437-S.SNP.12:20041176 chr12:020041176 0 W/20041176-20041176 FN3437-S SNP T -> A AC=1;AN=184;BQB=0.525382;DP=2883;DP4=1255,1522,13,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.74557e-09;MQSB=0.996654;RPB=0.922041;SGB=53.3568;VDB=0.873965;EFF=INTERGENIC(MODIFIER||||||||||1) FN3437-S.SNP.12:20041183 chr12:020041183 0 W/20041183-20041183 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.967798;DP=2823;DP4=1281,1487,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.85396e-09;MQSB=0.994519;RPB=0.54683;SGB=53.2642;VDB=0.0301551;EFF=INTERGENIC(MODIFIER||||||||||1) FN1631-S.SNP.12:20041781 chr12:020041781 0 W/20041781-20041781 FN1631-S Single Base Substitution A-T INTERGENIC HET SNo: 1339, Mutant_ID: FN1631-S, Generation: M2, Mutations: 68, Genes: 17, Seed availability: Yes. FN2096-S.SNP.12:20047198 chr12:020047198 0 W/20047198-20047198 FN2096-S SNP A -> G AC=1;AN=168;BQB=0.224706;DP=2574;DP4=1101,1447,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=39;MQ0F=0.0003885;MQB=0.14002;MQSB=5.10455e-06;RPB=0.916869;SGB=7.05233;VDB=0.219731;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.12:20056054 chr12:020056054 0 W/20056054-20056054 FN3913-S SNP A -> G AC=2;AN=158;BQB=0.964328;DP=1990;DP4=1042,809,22,5;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=7.73536e-13;MQSB=0.980006;RPB=0.762913;SGB=112.609;VDB=0.862672;EFF=INTERGENIC(MODIFIER||||||||||1) FN1673-S.SNP.12:20056351 chr12:020056351 0 W/20056351-20056351 FN1673-S SNP G -> C AC=1;AN=188;BQB=0.832635;DP=2921;DP4=2044,850,9,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.0427e-06;MQSB=0.969808;RPB=0.993606;SGB=-16.6296;VDB=0.0779093;EFF=INTERGENIC(MODIFIER||||||||||1) FN419-S.SNP.12:20057694 chr12:020057694 0 W/20057694-20057694 FN419-S Single Base Substitution C-T INTERGENIC HET SNo: 418, Mutant_ID: FN419-S, Generation: M2, Mutations: 62, Genes: 18, Seed availability: Yes. FN970-S.SNP.12:20072637 chr12:020072637 0 W/20072637-20072637 FN970-S Single Base Substitution G-T INTERGENIC HOMO SNo: 874, Mutant_ID: FN970-S, Generation: M2, Mutations: 30, Genes: 11, Seed availability: Yes. FN1337-S.SNP.12:20073900 chr12:020073900 0 W/20073900-20073900 FN1337-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1138, Mutant_ID: FN1337-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2584-S.SNP.12:20073900 chr12:020073900 0 W/20073900-20073900 FN2584-S SNP G -> A AC=2;AN=198;BQB=0.680628;DP=3566;DP4=1733,1542,22,25;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0120583;MQB=5.01997e-09;MQSB=1.5105e-20;RPB=0.273662;SGB=4.01782;VDB=0.0114263;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.12:20074061 chr12:020074061 0 W/20074061-20074061 FN2638-S SNP C -> T AC=1;AN=200;BQB=0.970365;DP=5389;DP4=2903,2130,13,6;HOB=5e-05;ICB=0.0001005;MQ=24;MQ0F=0.22583;MQB=0.487558;MQSB=0;RPB=0.973914;SGB=58.2954;VDB=0.705012;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A409T|458|LOC_Os12g33170|protein_coding|CODING|LOC_Os12g33170.1|1|1) FN3553-S.SNP.12:20075228 chr12:020075228 0 W/20075228-20075228 FN3553-S SNP C -> T AC=1;AN=188;BQB=0.917321;DP=4311;DP4=1955,1977,7,14;HOB=5.65867e-05;ICB=0.000113775;MQ=26;MQ0F=0.169334;MQB=0.58283;MQSB=0;RPB=0.985661;SGB=38.7926;VDB=0.174014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G20S|458|LOC_Os12g33170|protein_coding|CODING|LOC_Os12g33170.1|1|1) FN1493-S.SNP.12:20075554 chr12:020075554 0 W/20075554-20075554 FN1493-S Single Base Substitution T-C INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN2690-S.SNP.12:20079118 chr12:020079118 0 W/20079118-20079118 FN2690-S SNP T -> C AC=1;AN=200;BQB=0.863256;DP=5014;DP4=2241,2586,10,13;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.010371;MQB=0.0102464;MQSB=0.0169495;RPB=0.617464;SGB=45.1159;VDB=0.0983995;EFF=UTR_3_PRIME(MODIFIER||1051||150|LOC_Os12g33180|protein_coding|CODING|LOC_Os12g33180.1|5|1) FN2332.SNP.12:20097077 chr12:020097077 0 W/20097077-20097077 FN2332 SNP C -> T AC=1;AN=192;BQB=0.996258;DP=5003;DP4=2218,2398,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.87671e-18;MQSB=0.900722;RPB=0.404282;SGB=30.82;VDB=0.860566;EFF=INTERGENIC(MODIFIER||||||||||1) FN1725-S.SNP.12:20101798 chr12:020101798 0 W/20101798-20101798 FN1725-S SNP G -> T AC=1;AN=188;BQB=0.165272;DP=2594;DP4=1502,1059,5,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000142051;MQSB=0.743038;RPB=0.378576;SGB=10.8165;VDB=0.5;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G219V|501|LOC_Os12g33230|protein_coding|CODING|LOC_Os12g33230.1|2|1) FN-93.SNP.12:20103191 chr12:020103191 0 W/20103191-20103191 FN-93 Single Base Substitution T-C UTR_3_PRIME HET SNo: 93, Mutant_ID: FN-93, Generation: M2, Mutations: 63, Genes: 270, Seed availability: Yes. FN1481-S.SNP.12:20106504 chr12:020106504 0 W/20106504-20106504 FN1481-S Single Base Substitution C-T UTR_5_PRIME HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. W607-2-1.SNP.12:20109548 chr12:020109548 0 W/20109548-20109548 W607-2-1 Single Base Substitution G-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN587-S.SNP.12:20117080 chr12:020117080 0 W/20117080-20117080 FN587-S Single Base Substitution A-T INTERGENIC HOMO SNo: 572, Mutant_ID: FN587-S, Generation: M2, Mutations: 60, Genes: 75, Seed availability: Yes. FN3535-S.SNP.12:20117448 chr12:020117448 0 W/20117448-20117448 FN3535-S SNP C -> T AC=2;AN=188;BQB=0.896022;DP=2376;DP4=845,1467,5,12;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0;MQB=9.91956e-07;MQSB=3.60852e-09;RPB=0.99414;SGB=50.1574;VDB=0.722694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2117-S.SNP.12:20120143 chr12:020120143 0 W/20120143-20120143 FN2117-S SNP C -> T AC=1;AN=168;BQB=0.0228075;DP=2858;DP4=1443,1374,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0318404;MQB=0.90764;MQSB=8.80974e-13;RPB=0.867796;SGB=-82.6471;VDB=0.817882;EFF=INTERGENIC(MODIFIER||||||||||1) FN1573-S.SNP.12:20124227 chr12:020124227 0 W/20124227-20124227 FN1573-S Single Base Substitution C-T INTERGENIC Homo SNo: 1312, Mutant_ID: FN1573-S, Generation: M2, Mutations: 91, Genes: 17, Seed availability: Yes. FN1582-S.SNP.12:20130429 chr12:020130429 0 W/20130429-20130429 FN1582-S Single Base Substitution C-T INTRON HET SNo: 1317, Mutant_ID: FN1582-S, Generation: M2, Mutations: 98, Genes: 37, Seed availability: Yes. FN661-S.SNP.12:20141285 chr12:020141285 0 W/20141285-20141285 FN661-S Single Base Substitution A-C INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN865-S.SNP.12:20142167 chr12:020142167 0 W/20142167-20142167 FN865-S Single Base Substitution T-A INTERGENIC HET SNo: 771, Mutant_ID: FN865-S, Generation: M2, Mutations: 60, Genes: 90, Seed availability: Yes. FN2390.SNP.12:20144229 chr12:020144229 0 W/20144229-20144229 FN2390 SNP G -> A AC=1;AN=200;BQB=0.585354;DP=4616;DP4=2367,1954,14,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.00551e-11;MQSB=0.971602;RPB=0.994599;SGB=77.2904;VDB=0.0245024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1324-S.SNP.12:20145279 chr12:020145279 0 W/20145279-20145279 FN1324-S Single Base Substitution G-A INTERGENIC HET SNo: 1127, Mutant_ID: FN1324-S, Generation: M2, Mutations: 67, Genes: 44, Seed availability: Yes. FN2130-S.SNP.12:20147170 chr12:020147170 0 W/20147170-20147170 FN2130-S SNP G -> T AC=1;AN=168;BQB=0.00784692;DP=3820;DP4=1962,1824,6,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.87226e-06;MQSB=0.995153;RPB=0.897099;SGB=-58.653;VDB=0.337124;EFF=INTERGENIC(MODIFIER||||||||||1) FN856-S.SNP.12:20156565 chr12:020156565 0 W/20156565-20156565 FN856-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g33320 retrotransposon protein, putative, unclassified, expressed SNo: 762, Mutant_ID: FN856-S, Generation: M2, Mutations: 32, Genes: 45, Seed availability: Yes. FN2272-S.SNP.12:20159627 chr12:020159627 0 W/20159627-20159627 FN2272-S SNP A -> G AC=1;AN=190;BQB=0.186201;DP=6481;DP4=2954,2830,42,38;HOB=5.54017e-05;ICB=0.000111386;MQ=25;MQ0F=0.190094;MQB=0.000204982;MQSB=4.26437e-09;RPB=0.983137;SGB=358.759;VDB=0.562683;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAa/gGa|E59G|1964|LOC_Os12g33330|protein_coding|CODING|LOC_Os12g33330.1|1|1) FN4104-S.SNP.12:20160410 chr12:020160410 0 W/20160410-20160410 FN4104-S SNP T -> G AC=1;AN=182;BQB=0.972943;DP=4806;DP4=2972,1688,15,7;HOB=6.03792e-05;ICB=0.000121422;MQ=20;MQ0F=0.290886;MQB=0.555417;MQSB=0.774017;RPB=0.0970561;SGB=67.2255;VDB=0.217505;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gGt|V320G|1964|LOC_Os12g33330|protein_coding|CODING|LOC_Os12g33330.1|1|1) FN2545-S.SNP.12:20180470 chr12:020180470 0 W/20180470-20180470 FN2545-S SNP G -> T AC=1;AN=198;BQB=0.999762;DP=4371;DP4=2187,2019,5,7;HOB=5.10152e-05;ICB=0.000102546;MQ=43;MQ0F=0.0370625;MQB=0.0262428;MQSB=2.16583e-18;RPB=0.415241;SGB=49.5489;VDB=0.387829;EFF=INTERGENIC(MODIFIER||||||||||1) FN1336-S.SNP.12:20185529 chr12:020185529 0 W/20185529-20185529 FN1336-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g33380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1137, Mutant_ID: FN1336-S, Generation: M2, Mutations: 66, Genes: 75, Seed availability: Yes. FN2492.SNP.12:20188957 chr12:020188957 0 W/20188957-20188957 FN2492 SNP T -> A AC=1;AN=200;BQB=0.347285;DP=4660;DP4=2352,2020,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.08387e-07;MQSB=0.97344;RPB=0.526422;SGB=54.6902;VDB=0.593372;EFF=INTERGENIC(MODIFIER||||||||||1) FN1099-S.SNP.12:20189888 chr12:020189888 0 W/20189888-20189888 FN1099-S Single Base Substitution T-C INTERGENIC HET SNo: 975, Mutant_ID: FN1099-S, Generation: M2, Mutations: 52, Genes: 23, Seed availability: Yes. FN4032-S.SNP.12:20201235 chr12:020201235 0 W/20201235-20201235 FN4032-S SNP A -> T AC=2;AN=168;BQB=0.866746;DP=1000;DP4=168,782,1,10;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=2.41582e-07;MQSB=0.617767;RPB=0.751408;SGB=43.3113;VDB=0.182174;EFF=INTERGENIC(MODIFIER||||||||||1) FN4032-S.SNP.12:20201236 chr12:020201236 0 W/20201236-20201236 FN4032-S SNP T -> C AC=2;AN=168;BQB=0.999592;DP=996;DP4=167,789,1,11;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.1477e-06;MQSB=0.618654;RPB=0.687926;SGB=31.3172;VDB=0.143863;EFF=INTERGENIC(MODIFIER||||||||||1) FN1436-S.SNP.12:20210761 chr12:020210761 0 W/20210761-20210761 FN1436-S Single Base Substitution C-T INTERGENIC HET SNo: 1208, Mutant_ID: FN1436-S, Generation: M2, Mutations: 58, Genes: 12, Seed availability: Yes. FN1585-S.SNP.12:20210837 chr12:020210837 0 W/20210837-20210837 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1273-S.SNP.12:20211648 chr12:020211648 0 W/20211648-20211648 FN1273-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g33450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN-234.SNP.12:20220439 chr12:020220439 0 W/20220439-20220439 FN-234 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g33460 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 233, Mutant_ID: FN-234, Generation: M2, Mutations: 72, Genes: 22, Seed availability: Yes. FN3825-S.SNP.12:20222362 chr12:020222362 0 W/20222362-20222362 FN3825-S SNP T -> C AC=1;AN=190;BQB=0.928551;DP=2231;DP4=1405,746,6,4;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.128194;MQB=0.598551;MQSB=1.30974e-10;RPB=0.463588;SGB=10.8904;VDB=0.0898754;EFF=INTRON(MODIFIER||||445|LOC_Os12g33460|protein_coding|CODING|LOC_Os12g33460.1|2|1) FN3311-S.SNP.12:20223113 chr12:020223113 0 W/20223113-20223113 FN3311-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1366, Mutant_ID: FN3311-S, Generation: M2, Mutations: 47, Genes: 9, Seed availability: Yes. FN1667-S.SNP.12:20226347 chr12:020226347 0 W/20226347-20226347 FN1667-S SNP T -> G AC=1;AN=188;BQB=0.383773;DP=3121;DP4=1876,1160,13,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0.00032041;MQB=5.62786e-08;MQSB=0.0405029;RPB=0.99872;SGB=10.1681;VDB=0.699446;EFF=INTERGENIC(MODIFIER||||||||||1) FN1414-S.SNP.12:20228924 chr12:020228924 0 W/20228924-20228924 FN1414-S Single Base Substitution A-G INTERGENIC HET SNo: 1191, Mutant_ID: FN1414-S, Generation: M2, Mutations: 74, Genes: 11, Seed availability: Yes. FN2317.SNP.12:20231143 chr12:020231143 0 W/20231143-20231143 FN2317 SNP T -> G AC=2;AN=192;BQB=0.916821;DP=5189;DP4=2663,2168,21,12;HOB=0.0206163;ICB=0.494846;MQ=45;MQ0F=0.00211987;MQB=0.0123244;MQSB=0.614956;RPB=0.229449;SGB=107.503;VDB=0.243198;EFF=INTERGENIC(MODIFIER||||||||||1) FN2459.SNP.12:20231996 chr12:020231996 0 W/20231996-20231996 FN2459 SNP C -> T AC=1;AN=200;BQB=0.628238;DP=4610;DP4=2242,2064,5,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.69617e-07;MQSB=0.910483;RPB=0.943898;SGB=63.4749;VDB=0.496189;EFF=INTERGENIC(MODIFIER||||||||||1) FN627-S.SNP.12:20234713 chr12:020234713 0 W/20234713-20234713 FN627-S Single Base Substitution G-A INTERGENIC HOMO SNo: 592, Mutant_ID: FN627-S, Generation: M2, Mutations: 85, Genes: 178, Seed availability: Yes. FN2221-S.SNP.12:20237713 chr12:020237713 0 W/20237713-20237713 FN2221-S SNP C -> G AC=2;AN=190;BQB=0.476972;DP=4770;DP4=2221,2236,26,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000209644;MQB=5.73739e-22;MQSB=0.971987;RPB=0.964428;SGB=153.378;VDB=0.374771;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.12:20240046 chr12:020240046 0 W/20240046-20240046 FN3839-S SNP A -> T AC=1;AN=190;BQB=0.729831;DP=3200;DP4=1526,1537,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=27;MQ0F=0.145625;MQB=0.598435;MQSB=0;RPB=0.275893;SGB=36.1006;VDB=0.728119;EFF=INTERGENIC(MODIFIER||||||||||1) FN3839-S.SNP.12:20240048 chr12:020240048 0 W/20240048-20240048 FN3839-S SNP T -> A AC=1;AN=190;BQB=0.305392;DP=3195;DP4=1523,1543,8,8;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.144914;MQB=0.485788;MQSB=0;RPB=0.462459;SGB=5.66499;VDB=0.743628;EFF=INTERGENIC(MODIFIER||||||||||1) FN4110-S.SNP.12:20243635 chr12:020243635 0 W/20243635-20243635 FN4110-S SNP G -> T AC=1;AN=182;BQB=0.856311;DP=2969;DP4=1113,1750,5,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0.000336814;MQB=9.84989e-11;MQSB=0.99586;RPB=0.189433;SGB=71.1765;VDB=0.123299;EFF=INTERGENIC(MODIFIER||||||||||1) FN2477.SNP.12:20244983 chr12:020244983 0 W/20244983-20244983 FN2477 SNP G -> A AC=1;AN=200;BQB=0.918272;DP=4996;DP4=2472,2270,8,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.26254e-08;MQSB=0.882685;RPB=0.881942;SGB=24.2746;VDB=0.747415;EFF=INTERGENIC(MODIFIER||||||||||1) FN1254-S.SNP.12:20246829 chr12:020246829 0 W/20246829-20246829 FN1254-S Single Base Substitution G-T INTERGENIC HET SNo: 1071, Mutant_ID: FN1254-S, Generation: M2, Mutations: 59, Genes: 20, Seed availability: Yes. FN2293.SNP.12:20247035 chr12:020247035 0 W/20247035-20247035 FN2293 SNP T -> G AC=1;AN=192;BQB=0.76543;DP=4804;DP4=2388,2029,7,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.17178e-08;MQSB=0.899914;RPB=0.984524;SGB=8.91915;VDB=0.0682515;EFF=INTERGENIC(MODIFIER||||||||||1) FN2657-S.SNP.12:20260198 chr12:020260198 0 W/20260198-20260198 FN2657-S SNP C -> T AC=2;AN=200;BQB=0.674805;DP=4434;DP4=2193,1897,32,25;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.32588e-28;MQSB=0.338213;RPB=0.799465;SGB=72.0916;VDB=0.357899;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S181L|795|LOC_Os12g33530|protein_coding|CODING|LOC_Os12g33530.1|5|1) FN1221-S.SNP.12:20262237 chr12:020262237 0 W/20262237-20262237 FN1221-S Single Base Substitution C-T INTRON HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2532-S.SNP.12:20265836 chr12:020265836 0 W/20265836-20265836 FN2532-S SNP T -> C AC=2;AN=186;BQB=0.89831;DP=4105;DP4=1877,2034,16,20;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0.000243605;MQB=1.66174e-18;MQSB=0.604754;RPB=0.94417;SGB=78.6516;VDB=0.130152;EFF=INTERGENIC(MODIFIER||||||||||1) FN4109-S.SNP.12:20267847 chr12:020267847 0 W/20267847-20267847 FN4109-S SNP G -> A AC=1;AN=182;BQB=0.928858;DP=2912;DP4=989,1854,2,8;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.190591;MQB=0.292985;MQSB=0.0823118;RPB=0.0816951;SGB=39.6007;VDB=0.0313847;EFF=INTERGENIC(MODIFIER||||||||||1) FN888-S.SNP.12:20268919 chr12:020268919 0 W/20268919-20268919 FN888-S Single Base Substitution C-T INTERGENIC HOMO SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN1072-S.SNP.12:20278705 chr12:020278705 0 W/20278705-20278705 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. W423-5-1.SNP.12:20279227 chr12:020279227 0 W/20279227-20279227 W423-5-1 Single Base Substitution A-G INTERGENIC HET SNo: 1410, Mutant_ID: W423-5-1, Generation: M2, Mutations: 74, Genes: 55, Seed availability: Yes. FN3330-S.SNP.12:20283242 chr12:020283242 0 W/20283242-20283242 FN3330-S SNP G -> A AC=2;AN=184;BQB=0.735517;DP=3067;DP4=1672,1262,17,5;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=9.77209e-11;MQSB=0.334871;RPB=0.648315;SGB=40.9276;VDB=0.515327;EFF=STOP_GAINED(HIGH|NONSENSE|tgG/tgA|W62*|235|LOC_Os12g33580|protein_coding|CODING|LOC_Os12g33580.1|1|1);LOF=(LOC_Os12g33580|LOC_Os12g33580|1|1.00);NMD=(LOC_Os12g33580|LOC_Os12g33580|1|1.00) FN3330-S.SNP.12:20283243 chr12:020283243 0 W/20283243-20283243 FN3330-S SNP C -> A AC=2;AN=184;BQB=0.876702;DP=3060;DP4=1667,1256,17,6;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.48196e-13;MQSB=0.483498;RPB=0.548606;SGB=70.9657;VDB=0.130799;EFF=SYNONYMOUS_CODING(LOW|SILENT|Cgg/Agg|R63|235|LOC_Os12g33580|protein_coding|CODING|LOC_Os12g33580.1|1|1) FN3677-S.SNP.12:20287837 chr12:020287837 0 W/20287837-20287837 FN3677-S SNP G -> A AC=1;AN=190;BQB=0.128575;DP=2766;DP4=1399,1266,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000198034;MQSB=0.984587;RPB=0.93746;SGB=36.1006;VDB=0.439007;EFF=INTERGENIC(MODIFIER||||||||||1) FN2320.SNP.12:20288992 chr12:020288992 0 W/20288992-20288992 FN2320 SNP G -> C AC=1;AN=192;BQB=0.396871;DP=4925;DP4=2370,2189,14,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.75234e-10;MQSB=0.991668;RPB=0.912153;SGB=64.7304;VDB=0.267191;EFF=INTRON(MODIFIER||||204|LOC_Os12g33590|protein_coding|CODING|LOC_Os12g33590.1|3|1) FN1551-S.SNP.12:20292481 chr12:020292481 0 W/20292481-20292481 FN1551-S Single Base Substitution T-G INTERGENIC HET SNo: 1297, Mutant_ID: FN1551-S, Generation: M2, Mutations: 75, Genes: 12, Seed availability: Yes. FN1193-S.SNP.12:20292728 chr12:020292728 0 W/20292728-20292728 FN1193-S Single Base Substitution T-C INTERGENIC HET SNo: 1027, Mutant_ID: FN1193-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: Yes. FN-91.SNP.12:20292781 chr12:020292781 0 W/20292781-20292781 FN-91 Single Base Substitution T-C INTERGENIC HOMO SNo: 91, Mutant_ID: FN-91, Generation: M2, Mutations: 25, Genes: 33, Seed availability: No. FN4241-S.SNP.12:20292930 chr12:020292930 0 W/20292930-20292930 FN4241-S SNP G -> C AC=1;AN=170;BQB=0.98668;DP=3052;DP4=1732,1238,16,11;HOB=6.92042e-05;ICB=0.000139222;MQ=47;MQ0F=0;MQB=2.50363e-11;MQSB=3.58622e-07;RPB=0.772188;SGB=114.512;VDB=0.993059;EFF=UTR_5_PRIME(MODIFIER||34||680|LOC_Os12g33610|protein_coding|CODING|LOC_Os12g33610.1|1|1) FN728-S.SNP.12:20294507 chr12:020294507 0 W/20294507-20294507 FN728-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g33610 phenylalanine ammonia-lyase, putative, expressed SNo: 653, Mutant_ID: FN728-S, Generation: M2, Mutations: 70, Genes: 37, Seed availability: Yes. FN1265-S.SNP.12:20297810 chr12:020297810 0 W/20297810-20297810 FN1265-S Single Base Substitution C-T INTERGENIC HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2701-S.SNP.12:20298468 chr12:020298468 0 W/20298468-20298468 FN2701-S SNP G -> A AC=1;AN=200;BQB=0.711752;DP=4742;DP4=2262,2146,10,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.32623e-08;MQSB=0.925853;RPB=0.574464;SGB=24.2746;VDB=0.160793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3535-S.SNP.12:20298999 chr12:020298999 0 W/20298999-20298999 FN3535-S SNP A -> G AC=2;AN=188;BQB=0.958622;DP=2745;DP4=1315,1331,11,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.25913e-13;MQSB=0.999797;RPB=0.988029;SGB=74.9605;VDB=0.0892882;EFF=INTERGENIC(MODIFIER||||||||||1) FN4011-S.SNP.12:20306123 chr12:020306123 0 W/20306123-20306123 FN4011-S SNP G -> C AC=1;AN=168;BQB=0.992494;DP=2726;DP4=1326,1290,7,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.28904e-08;MQSB=0.390819;RPB=0.903536;SGB=65.4653;VDB=0.981409;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcC|A503|630|LOC_Os12g33640|protein_coding|CODING|LOC_Os12g33640.1|4|1) FN704-S.SNP.12:20308857 chr12:020308857 0 W/20308857-20308857 FN704-S Single Base Substitution G-T INTERGENIC HET SNo: 633, Mutant_ID: FN704-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: Yes. FN2665-S.SNP.12:20315706 chr12:020315706 0 W/20315706-20315706 FN2665-S SNP C -> T AC=1;AN=200;BQB=0.702797;DP=5355;DP4=2608,2470,19,6;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.288329;MQB=0.356913;MQSB=0.972915;RPB=0.648657;SGB=50.3263;VDB=0.704114;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.12:20316549 chr12:020316549 0 W/20316549-20316549 FN-206 Single Base Substitution G-A INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN-310.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN-310 Single Base Substitution T-A INTERGENIC HOMO SNo: 305, Mutant_ID: FN-310, Generation: M2, Mutations: 44, Genes: 9, Seed availability: Yes. FN1696-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN1696-S SNP T -> A AC=2;AN=188;BQB=0.000804938;DP=3303;DP4=1401,1853,16,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.54675e-12;MQSB=0.167805;RPB=0.915284;SGB=-258.275;VDB=0.37554;EFF=INTERGENIC(MODIFIER||||||||||1) FN2107-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN2107-S SNP T -> A AC=1;AN=168;BQB=0.16271;DP=3699;DP4=1755,1913,9,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000270343;MQB=2.65084e-07;MQSB=0.256367;RPB=0.88624;SGB=-61.7914;VDB=0.857082;EFF=INTERGENIC(MODIFIER||||||||||1) FN2181-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN2181-S SNP T -> A AC=2;AN=190;BQB=0.580625;DP=4945;DP4=2100,2401,16,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.52161e-20;MQSB=0.378569;RPB=0.997778;SGB=82.3989;VDB=0.871587;EFF=INTERGENIC(MODIFIER||||||||||1) FN2312.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN2312 SNP T -> A AC=2;AN=192;BQB=0.817501;DP=4550;DP4=1997,2234,14,30;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0.00021978;MQB=4.43385e-21;MQSB=0.460458;RPB=0.966102;SGB=98.1513;VDB=0.99359;EFF=INTERGENIC(MODIFIER||||||||||1) FN2651-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN2651-S SNP T -> A AC=1;AN=200;BQB=0.914063;DP=4577;DP4=2092,2239,16,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.29595e-12;MQSB=0.244088;RPB=0.415888;SGB=20.7261;VDB=0.762508;EFF=INTERGENIC(MODIFIER||||||||||1) FN3401-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN3401-S SNP T -> A AC=2;AN=184;BQB=0.704284;DP=2732;DP4=1267,1345,13,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.47717e-15;MQSB=0.186203;RPB=0.145658;SGB=68.6673;VDB=0.639896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3520-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN3520-S SNP T -> A AC=1;AN=188;BQB=0.590845;DP=2773;DP4=1291,1403,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42233e-05;MQSB=0.287768;RPB=0.999901;SGB=35.9843;VDB=0.737558;EFF=INTERGENIC(MODIFIER||||||||||1) FN4204-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN4204-S SNP T -> A AC=1;AN=170;BQB=0.974254;DP=2525;DP4=1179,1268,5,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.43826e-05;MQSB=0.148629;RPB=0.103113;SGB=7.67082;VDB=0.322751;EFF=INTERGENIC(MODIFIER||||||||||1) FN566-S.SNP.12:20323249 chr12:020323249 0 W/20323249-20323249 FN566-S Single Base Substitution T-A INTERGENIC HOMO SNo: 558, Mutant_ID: FN566-S, Generation: M2, Mutations: 59, Genes: 9, Seed availability: Yes. FN864-S.SNP.12:20323476 chr12:020323476 0 W/20323476-20323476 FN864-S Single Base Substitution A-G INTERGENIC HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3835-S.SNP.12:20324892 chr12:020324892 0 W/20324892-20324892 FN3835-S SNP G -> A AC=1;AN=190;BQB=0.66855;DP=2928;DP4=1451,1344,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=35;MQ0F=0.0491803;MQB=0.999906;MQSB=0.100503;RPB=0.412057;SGB=49.0954;VDB=0.638723;EFF=INTERGENIC(MODIFIER||||||||||1) FN2318.SNP.12:20325124 chr12:020325124 0 W/20325124-20325124 FN2318 SNP A -> T AC=1;AN=192;BQB=0.5299;DP=7943;DP4=3851,3503,12,19;HOB=5.42535e-05;ICB=0.000109072;MQ=23;MQ0F=0.367493;MQB=0.805074;MQSB=0;RPB=0.569255;SGB=-6.30345;VDB=0.764663;EFF=INTERGENIC(MODIFIER||||||||||1) FN2752-S.SNP.12:20325124 chr12:020325124 0 W/20325124-20325124 FN2752-S SNP A -> T AC=1;AN=200;BQB=0.9271;DP=7689;DP4=3882,3373,10,7;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.37222;MQB=0.998545;MQSB=0;RPB=0.992513;SGB=29.4849;VDB=0.997568;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.12:20325124 chr12:020325124 0 W/20325124-20325124 FN3762-S SNP A -> T AC=1;AN=190;BQB=0.259112;DP=3799;DP4=1990,1578,14,6;HOB=5.54017e-05;ICB=0.000111386;MQ=19;MQ0F=0.44538;MQB=0.957442;MQSB=0;RPB=0.999982;SGB=11.8805;VDB=0.965627;EFF=INTERGENIC(MODIFIER||||||||||1) FN3469-S.SNP.12:20329043 chr12:020329043 0 W/20329043-20329043 FN3469-S SNP A -> C AC=1;AN=184;BQB=0.953566;DP=3252;DP4=1714,1451,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=36;MQ0F=0.0178352;MQB=0.0371593;MQSB=3.23449e-25;RPB=0.0878953;SGB=48.7425;VDB=0.440288;EFF=INTRON(MODIFIER||||798|LOC_Os12g33670|protein_coding|CODING|LOC_Os12g33670.1|1|1) FN3319-S.SNP.12:20332964 chr12:020332964 0 W/20332964-20332964 FN3319-S SNP G -> A AC=1;AN=184;BQB=0.847508;DP=3139;DP4=1782,1196,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=5.1912e-08;MQSB=0.000150574;RPB=0.595002;SGB=39.2697;VDB=0.802783;EFF=INTERGENIC(MODIFIER||||||||||1) FN3319-S.SNP.12:20332965 chr12:020332965 0 W/20332965-20332965 FN3319-S SNP C -> A AC=1;AN=184;BQB=0.728131;DP=3141;DP4=1803,1189,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.82428e-06;MQSB=0.000164851;RPB=0.964977;SGB=35.7479;VDB=0.649234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2261-S.SNP.12:20335437 chr12:020335437 0 W/20335437-20335437 FN2261-S SNP T -> A AC=1;AN=190;BQB=0.0623508;DP=4771;DP4=2079,2169,17,25;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0023056;MQB=5.96838e-07;MQSB=0.142774;RPB=0.37402;SGB=92.6144;VDB=0.953451;EFF=INTERGENIC(MODIFIER||||||||||1) FN3808-S.SNP.12:20336404 chr12:020336404 0 W/20336404-20336404 FN3808-S SNP A -> T AC=1;AN=190;BQB=0.328068;DP=2747;DP4=1450,1187,8,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.59974e-07;MQSB=0.999144;RPB=0.986513;SGB=7.21887;VDB=0.681711;EFF=INTERGENIC(MODIFIER||||||||||1) FN3287-S.SNP.12:20343152 chr12:020343152 0 W/20343152-20343152 FN3287-S SNP G -> C AC=1;AN=184;BQB=0.760571;DP=3282;DP4=1712,1469,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.003961;MQB=0.0046429;MQSB=0.002884;RPB=0.272546;SGB=28.7043;VDB=0.885234;EFF=INTERGENIC(MODIFIER||||||||||1) FN3668-S.SNP.12:20344229 chr12:020344229 0 W/20344229-20344229 FN3668-S SNP T -> C AC=1;AN=190;BQB=0.999288;DP=2874;DP4=1299,1489,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.29505e-09;MQSB=0.586438;RPB=0.953045;SGB=62.7569;VDB=0.539953;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aTc/aCc|I45T|383|LOC_Os12g33700|protein_coding|CODING|LOC_Os12g33700.1|2|1) FN2544-S.SNP.12:20346657 chr12:020346657 0 W/20346657-20346657 FN2544-S SNP G -> A AC=1;AN=186;BQB=0.840211;DP=3895;DP4=2067,1665,15,3;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0;MQB=1.84681e-11;MQSB=0.944156;RPB=0.896916;SGB=77.1196;VDB=0.983764;EFF=INTERGENIC(MODIFIER||||||||||1) FN2195-S.SNP.12:20347859 chr12:020347859 0 W/20347859-20347859 FN2195-S SNP A -> G AC=1;AN=190;BQB=0.206957;DP=5196;DP4=2538,2344,11,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.00764e-11;MQSB=0.952105;RPB=0.708877;SGB=13.4344;VDB=0.961696;EFF=INTERGENIC(MODIFIER||||||||||1) FN1273-S.SNP.12:20351894 chr12:020351894 0 W/20351894-20351894 FN1273-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1087, Mutant_ID: FN1273-S, Generation: M2, Mutations: 66, Genes: 90, Seed availability: Yes. FN4132-S.SNP.12:20351923 chr12:020351923 0 W/20351923-20351923 FN4132-S SNP G -> A AC=1;AN=182;BQB=0.970005;DP=2985;DP4=1484,1419,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.55929e-08;MQSB=0.997693;RPB=0.990813;SGB=53.1331;VDB=0.78464;EFF=INTERGENIC(MODIFIER||||||||||1) FN519-S.SNP.12:20353520 chr12:020353520 0 W/20353520-20353520 FN519-S Single Base Substitution A-G INTERGENIC HET SNo: 517, Mutant_ID: FN519-S, Generation: M2, Mutations: 33, Genes: 100, Seed availability: Yes. FN4098-S.SNP.12:20354057 chr12:020354057 0 W/20354057-20354057 FN4098-S SNP C -> G AC=1;AN=182;BQB=0.501026;DP=3074;DP4=1402,1605,10,12;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.55118e-09;MQSB=0.853886;RPB=0.280139;SGB=93.7308;VDB=0.511413;EFF=INTERGENIC(MODIFIER||||||||||1) FN425-S.SNP.12:20359181 chr12:020359181 0 W/20359181-20359181 FN425-S Single Base Substitution A-T INTERGENIC HET SNo: 424, Mutant_ID: FN425-S, Generation: M2, Mutations: 70, Genes: 74, Seed availability: No. FN461-S.SNP.12:20364105 chr12:020364105 0 W/20364105-20364105 FN461-S Single Base Substitution C-T INTERGENIC HOMO SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN4147-S.SNP.12:20365985 chr12:020365985 0 W/20365985-20365985 FN4147-S SNP T -> A AC=1;AN=170;BQB=0.987806;DP=2296;DP4=1125,1039,8,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.47187e-07;MQSB=0.967743;RPB=0.798765;SGB=31.4354;VDB=0.740454;EFF=INTERGENIC(MODIFIER||||||||||1) FN3903-S.SNP.12:20378820 chr12:020378820 0 W/20378820-20378820 FN3903-S SNP T -> C AC=1;AN=156;BQB=0.998771;DP=2369;DP4=1282,1001,12,12;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=1.30281e-13;MQSB=0.998582;RPB=0.720235;SGB=99.5005;VDB=0.0287014;EFF=INTERGENIC(MODIFIER||||||||||1) FN3505-S.SNP.12:20380033 chr12:020380033 0 W/20380033-20380033 FN3505-S SNP C -> T AC=2;AN=188;BQB=0.672079;DP=2723;DP4=1536,1091,17,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.48457e-12;MQSB=0.965446;RPB=0.574322;SGB=78.5038;VDB=0.331096;EFF=INTERGENIC(MODIFIER||||||||||1) FN4063-S.SNP.12:20380033 chr12:020380033 0 W/20380033-20380033 FN4063-S SNP C -> T AC=1;AN=168;BQB=0.57237;DP=2685;DP4=1413,1142,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.70665e-07;MQSB=0.99291;RPB=0.999274;SGB=55.3328;VDB=0.658646;EFF=INTERGENIC(MODIFIER||||||||||1) FN3594-S.SNP.12:20399845 chr12:020399845 0 W/20399845-20399845 FN3594-S SNP G -> A AC=1;AN=188;BQB=0.940263;DP=3293;DP4=1645,1577,9,6;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0197388;MQB=0.00130568;MQSB=5.08453e-07;RPB=0.797922;SGB=62.6088;VDB=0.261829;EFF=INTERGENIC(MODIFIER||||||||||1) FN2721-S.SNP.12:20402687 chr12:020402687 0 W/20402687-20402687 FN2721-S SNP G -> A AC=1;AN=200;BQB=0.997535;DP=5624;DP4=2504,2836,12,20;HOB=5e-05;ICB=0.0001005;MQ=27;MQ0F=0.20857;MQB=0.997834;MQSB=0;RPB=0.793057;SGB=-187.639;VDB=0.671773;EFF=INTERGENIC(MODIFIER||||||||||1) FN901-S.SNP.12:20403547 chr12:020403547 0 W/20403547-20403547 FN901-S Single Base Substitution T-C INTERGENIC HET SNo: 807, Mutant_ID: FN901-S, Generation: M2, Mutations: 85, Genes: 34, Seed availability: No. FN-89.SNP.12:20404018 chr12:020404018 0 W/20404018-20404018 FN-89 Single Base Substitution G-T INTERGENIC HET SNo: 89, Mutant_ID: FN-89, Generation: M2, Mutations: 41, Genes: 13, Seed availability: Yes. FN1630-S.SNP.12:20406476 chr12:020406476 0 W/20406476-20406476 FN1630-S Single Base Substitution C-A INTERGENIC HET SNo: 1338, Mutant_ID: FN1630-S, Generation: M2, Mutations: 115, Genes: 31, Seed availability: Yes. FN1197-S.SNP.12:20407024 chr12:020407024 0 W/20407024-20407024 FN1197-S Single Base Substitution G-A INTERGENIC HET SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN-6.SNP.12:20408313 chr12:020408313 0 W/20408313-20408313 FN-6 Single Base Substitution C-A INTERGENIC Homo SNo: 6, Mutant_ID: FN-6, Generation: M2, Mutations: 37, Genes: 34, Seed availability: Yes. FN3906-S.SNP.12:20409387 chr12:020409387 0 W/20409387-20409387 FN3906-S SNP C -> G AC=1;AN=156;BQB=0.977738;DP=2352;DP4=1148,1118,6,4;HOB=8.21828e-05;ICB=0.000165419;MQ=49;MQ0F=0;MQB=2.46946e-05;MQSB=0.672235;RPB=0.273709;SGB=38.3284;VDB=0.678333;EFF=INTERGENIC(MODIFIER||||||||||1) FN521-S.SNP.12:20409447 chr12:020409447 0 W/20409447-20409447 FN521-S Single Base Substitution G-A INTERGENIC HET SNo: 519, Mutant_ID: FN521-S, Generation: M2, Mutations: 79, Genes: 24, Seed availability: Yes. FN2690-S.SNP.12:20410301 chr12:020410301 0 W/20410301-20410301 FN2690-S SNP A -> G AC=1;AN=200;BQB=0.400999;DP=4556;DP4=2115,2299,6,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.31852e-07;MQSB=0.746602;RPB=0.683956;SGB=49.6594;VDB=0.696154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3283-S.SNP.12:20410351 chr12:020410351 0 W/20410351-20410351 FN3283-S SNP C -> T AC=2;AN=184;BQB=0.948733;DP=3146;DP4=1455,1584,11,10;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000317864;MQB=1.26005e-09;MQSB=0.326513;RPB=0.899603;SGB=63.9222;VDB=0.236285;EFF=INTERGENIC(MODIFIER||||||||||1) FN1256-S.SNP.12:20410833 chr12:020410833 0 W/20410833-20410833 FN1256-S Single Base Substitution G-A INTERGENIC HET SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN2222-S.SNP.12:20424792 chr12:020424792 0 W/20424792-20424792 FN2222-S SNP G -> A AC=2;AN=190;BQB=0.723545;DP=4293;DP4=2000,1977,32,14;HOB=0.020831;ICB=0.494793;MQ=37;MQ0F=0.103191;MQB=0.683567;MQSB=0;RPB=0.995285;SGB=153.378;VDB=0.547608;EFF=INTERGENIC(MODIFIER||||||||||1) FN1638-S.SNP.12:20427582 chr12:020427582 0 W/20427582-20427582 FN1638-S Single Base Substitution C-T INTERGENIC HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3357-S.SNP.12:20437158 chr12:020437158 0 W/20437158-20437158 FN3357-S SNP G -> T AC=1;AN=184;BQB=0.659846;DP=5264;DP4=2550,2571,10,14;HOB=5.90737e-05;ICB=0.00011879;MQ=31;MQ0F=0.170023;MQB=0.195515;MQSB=0.174316;RPB=0.183776;SGB=17.4548;VDB=0.877289;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccg/Acg|P1654T|2360|LOC_Os12g33910|protein_coding|CODING|LOC_Os12g33910.1|4|1) FN2535-S.SNP.12:20437607 chr12:020437607 0 W/20437607-20437607 FN2535-S SNP G -> A AC=1;AN=198;BQB=0.53725;DP=5202;DP4=2294,2647,13,6;HOB=5.10152e-05;ICB=0.000102546;MQ=34;MQ0F=0.0445982;MQB=0.998137;MQSB=1.0016e-15;RPB=0.998378;SGB=34.5346;VDB=0.596126;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S1504L|2360|LOC_Os12g33910|protein_coding|CODING|LOC_Os12g33910.1|4|1) FN992-S.SNP.12:20442980 chr12:020442980 0 W/20442980-20442980 FN992-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HET LOC_Os12g33910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 895, Mutant_ID: FN992-S, Generation: M2, Mutations: 40, Genes: 35, Seed availability: Yes. FN3464-S.SNP.12:20444974 chr12:020444974 0 W/20444974-20444974 FN3464-S SNP C -> A AC=1;AN=184;BQB=0.796803;DP=2766;DP4=1393,1323,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.112437;MQB=0.910926;MQSB=0;RPB=0.785365;SGB=48.7425;VDB=0.254982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGg/tTg|W117L|2360|LOC_Os12g33910|protein_coding|CODING|LOC_Os12g33910.1|1|1) FN1275-S.SNP.12:20466887 chr12:020466887 0 W/20466887-20466887 FN1275-S Single Base Substitution C-T INTERGENIC HET SNo: 1089, Mutant_ID: FN1275-S, Generation: M2, Mutations: 41, Genes: 112, Seed availability: Yes. FN2203-S.SNP.12:20467109 chr12:020467109 0 W/20467109-20467109 FN2203-S SNP C -> T AC=1;AN=190;BQB=0.799097;DP=4649;DP4=2202,2134,16,13;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.23446e-12;MQSB=0.130931;RPB=0.936554;SGB=126.511;VDB=0.700468;EFF=INTERGENIC(MODIFIER||||||||||1) FN1470-S.SNP.12:20498005 chr12:020498005 0 W/20498005-20498005 FN1470-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20524499 chr12:020524499 0 W/20524499-20524499 FN1470-S Single Base Substitution T-C INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20526536 chr12:020526536 0 W/20526536-20526536 FN1470-S Single Base Substitution C-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20527521 chr12:020527521 0 W/20527521-20527521 FN1470-S Single Base Substitution A-C INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20527573 chr12:020527573 0 W/20527573-20527573 FN1470-S Single Base Substitution G-A INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20534731 chr12:020534731 0 W/20534731-20534731 FN1470-S Single Base Substitution C-T INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1470-S.SNP.12:20544757 chr12:020544757 0 W/20544757-20544757 FN1470-S Single Base Substitution A-G INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN1444-S.SNP.12:20544912 chr12:020544912 0 W/20544912-20544912 FN1444-S Single Base Substitution G-A INTERGENIC HET SNo: 1215, Mutant_ID: FN1444-S, Generation: M2, Mutations: 50, Genes: 67, Seed availability: Yes. FN1287-S.SNP.12:20565960 chr12:020565960 0 W/20565960-20565960 FN1287-S Single Base Substitution C-T INTERGENIC HET SNo: 1101, Mutant_ID: FN1287-S, Generation: M2, Mutations: 72, Genes: 144, Seed availability: Yes. FN3842-S.SNP.12:20565960 chr12:020565960 0 W/20565960-20565960 FN3842-S SNP C -> T AC=2;AN=190;BQB=0.951153;DP=2774;DP4=1396,1271,14,15;HOB=0.020831;ICB=0.494793;MQ=31;MQ0F=0.0915645;MQB=0.599297;MQSB=0.00522992;RPB=0.875877;SGB=126.511;VDB=0.382404;EFF=INTERGENIC(MODIFIER||||||||||1) FN3591-S.SNP.12:20566861 chr12:020566861 0 W/20566861-20566861 FN3591-S SNP T -> G AC=1;AN=188;BQB=0.868369;DP=2941;DP4=1288,1507,8,7;HOB=5.65867e-05;ICB=0.000113775;MQ=36;MQ0F=0.0285617;MQB=0.872539;MQSB=6.33016e-30;RPB=0.619368;SGB=62.6088;VDB=0.634554;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E139D|427|LOC_Os12g34050|protein_coding|CODING|LOC_Os12g34050.1|1|1) FN2535-S.SNP.12:20596145 chr12:020596145 0 W/20596145-20596145 FN2535-S SNP C -> A AC=2;AN=198;BQB=0.929807;DP=4032;DP4=1905,1936,14,6;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0823413;MQB=0.00438251;MQSB=1.2102e-14;RPB=0.537446;SGB=86.3098;VDB=0.564262;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tTt|C1042F|1790|LOC_Os12g34090|protein_coding|CODING|LOC_Os12g34090.1|3|1) FN2535-S.SNP.12:20596146 chr12:020596146 0 W/20596146-20596146 FN2535-S SNP A -> T AC=2;AN=198;BQB=0.943985;DP=4045;DP4=1888,1845,15,7;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0810878;MQB=0.0061952;MQSB=2.19883e-13;RPB=0.449852;SGB=42.3199;VDB=0.721807;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tgt/Agt|C1042S|1790|LOC_Os12g34090|protein_coding|CODING|LOC_Os12g34090.1|3|1) FN2535-S.SNP.12:20596147 chr12:020596147 0 W/20596147-20596147 FN2535-S SNP C -> T AC=2;AN=198;BQB=0.96627;DP=4070;DP4=1928,1975,14,6;HOB=0.019998;ICB=0.495001;MQ=36;MQ0F=0.0955774;MQB=0.0100268;MQSB=1.9562e-16;RPB=0.37705;SGB=86.3098;VDB=0.54459;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaG/aaA|K1041|1790|LOC_Os12g34090|protein_coding|CODING|LOC_Os12g34090.1|3|1) FN1470-S.SNP.12:20613172 chr12:020613172 0 W/20613172-20613172 FN1470-S Single Base Substitution C-G INTERGENIC HET SNo: 1237, Mutant_ID: FN1470-S, Generation: M2, Mutations: 92, Genes: 34, Seed availability: Yes. FN3559-S.SNP.12:20681373 chr12:020681373 0 W/20681373-20681373 FN3559-S SNP C -> T AC=1;AN=188;BQB=0.925719;DP=3363;DP4=1779,1510,10,6;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.0773119;MQB=0.895274;MQSB=0;RPB=0.984017;SGB=67.1521;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN2531-S.SNP.12:20683832 chr12:020683832 0 W/20683832-20683832 FN2531-S SNP T -> C AC=1;AN=192;BQB=0.94027;DP=3427;DP4=1659,1577,8,11;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0256784;MQB=0.0514457;MQSB=9.4987e-20;RPB=0.747652;SGB=58.1246;VDB=0.432721;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.12:20683998 chr12:020683998 0 W/20683998-20683998 FN2435 SNP C -> T AC=1;AN=200;BQB=0.689912;DP=3917;DP4=2100,1497,10,15;HOB=5e-05;ICB=0.0001005;MQ=29;MQ0F=0.162114;MQB=0.05173;MQSB=4.83952e-05;RPB=0.113539;SGB=79.9264;VDB=0.00865743;EFF=INTERGENIC(MODIFIER||||||||||1) FN2095-S.SNP.12:20685182 chr12:020685182 0 W/20685182-20685182 FN2095-S SNP G -> C AC=1;AN=168;BQB=0.210566;DP=3976;DP4=2060,1879,9,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000251509;MQB=5.89945e-07;MQSB=0.610403;RPB=0.722054;SGB=-41.7816;VDB=0.286759;EFF=INTRON(MODIFIER||||543|LOC_Os12g34140|protein_coding|CODING|LOC_Os12g34140.1|2|1) FN2337.SNP.12:20691487 chr12:020691487 0 W/20691487-20691487 FN2337 SNP C -> T AC=1;AN=192;BQB=0.938684;DP=4609;DP4=2202,2129,13,12;HOB=5.42535e-05;ICB=0.000109072;MQ=41;MQ0F=0.0240833;MQB=0.393365;MQSB=6.39427e-16;RPB=0.479317;SGB=-39.2487;VDB=0.846039;EFF=INTERGENIC(MODIFIER||||||||||1) FN2638-S.SNP.12:20691677 chr12:020691677 0 W/20691677-20691677 FN2638-S SNP A -> G AC=1;AN=200;BQB=0.906389;DP=6854;DP4=4422,2122,11,13;HOB=5e-05;ICB=0.0001005;MQ=22;MQ0F=0.403706;MQB=0.0580943;MQSB=0;RPB=0.106682;SGB=47.7211;VDB=0.362543;EFF=INTERGENIC(MODIFIER||||||||||1) FN892-S.SNP.12:20710509 chr12:020710509 0 W/20710509-20710509 FN892-S Single Base Substitution T-C INTRON HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN2417.SNP.12:20713171 chr12:020713171 0 W/20713171-20713171 FN2417 SNP G -> T AC=1;AN=200;BQB=0.251475;DP=4004;DP4=1998,1788,14,8;HOB=5e-05;ICB=0.0001005;MQ=31;MQ0F=0.025974;MQB=0.787777;MQSB=3.91664e-12;RPB=0.291546;SGB=69.1109;VDB=0.00157986;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccT|P1424|2103|LOC_Os12g34160|protein_coding|CODING|LOC_Os12g34160.1|4|1) FN4275-S.SNP.12:20718415 chr12:020718415 0 W/20718415-20718415 FN4275-S SNP G -> T AC=1;AN=170;BQB=0.25956;DP=1993;DP4=986,898,4,7;HOB=6.92042e-05;ICB=0.000139222;MQ=42;MQ0F=0.0346212;MQB=0.50409;MQSB=0.740991;RPB=0.989213;SGB=12.556;VDB=0.91083;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctc/Atc|L40I|194|LOC_Os12g34170|protein_coding|CODING|LOC_Os12g34170.1|1|1) FN2677-S.SNP.12:20723950 chr12:020723950 0 W/20723950-20723950 FN2677-S SNP A -> G AC=1;AN=200;BQB=0.794124;DP=6678;DP4=3432,2822,20,21;HOB=5e-05;ICB=0.0001005;MQ=25;MQ0F=0.133124;MQB=0.0120379;MQSB=0.829896;RPB=0.999047;SGB=137.609;VDB=0.686055;EFF=SYNONYMOUS_CODING(LOW|SILENT|Ttg/Ctg|L281|1805|LOC_Os12g34180|protein_coding|CODING|LOC_Os12g34180.1|2|1) FN3959-S.SNP.12:20724706 chr12:020724706 0 W/20724706-20724706 FN3959-S SNP G -> A AC=2;AN=168;BQB=0.958164;DP=2969;DP4=1142,1691,10,12;HOB=0.0235261;ICB=0.494119;MQ=44;MQ0F=0.0215561;MQB=0.00309525;MQSB=0.30363;RPB=0.967309;SGB=92.0501;VDB=0.0798364;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgt/Tgt|R29C|1805|LOC_Os12g34180|protein_coding|CODING|LOC_Os12g34180.1|2|1) FN2118-S.SNP.12:20728639 chr12:020728639 0 W/20728639-20728639 FN2118-S SNP C -> T AC=1;AN=168;BQB=0.831956;DP=3081;DP4=1171,1871,8,6;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0.0214216;MQB=0.0150209;MQSB=0.373863;RPB=0.840534;SGB=-17.0958;VDB=0.296558;EFF=INTERGENIC(MODIFIER||||||||||1) FN2625-S.SNP.12:20754385 chr12:020754385 0 W/20754385-20754385 FN2625-S SNP T -> C AC=1;AN=200;BQB=0.61298;DP=5248;DP4=2166,2741,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.78018e-19;MQSB=0.984165;RPB=0.709904;SGB=141.763;VDB=0.313328;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acg/Gcg|T30A|191|LOC_Os12g34230|protein_coding|CODING|LOC_Os12g34230.1|2|1) FN-394.SNP.12:20756050 chr12:020756050 0 W/20756050-20756050 FN-394 Single Base Substitution C-G INTERGENIC HET SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN971-S.SNP.12:20757528 chr12:020757528 0 W/20757528-20757528 FN971-S Single Base Substitution T-G INTRON HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN2690-S.SNP.12:20757637 chr12:020757637 0 W/20757637-20757637 FN2690-S SNP T -> C AC=1;AN=200;BQB=0.699314;DP=5175;DP4=2463,2482,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000193237;MQB=1.39534e-06;MQSB=0.972119;RPB=0.997459;SGB=4.67442;VDB=0.131828;EFF=INTRON(MODIFIER||||534|LOC_Os12g34240|protein_coding|CODING|LOC_Os12g34240.1|3|1) FN2539-S.SNP.12:20759835 chr12:020759835 0 W/20759835-20759835 FN2539-S SNP G -> A AC=1;AN=198;BQB=0.249416;DP=3659;DP4=1682,1746,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.20703e-09;MQSB=0.959692;RPB=0.998186;SGB=43.7442;VDB=0.946541;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P143L|534|LOC_Os12g34240|protein_coding|CODING|LOC_Os12g34240.1|2|1) FN1261-S.SNP.12:20774915 chr12:020774915 0 W/20774915-20774915 FN1261-S Single Base Substitution T-A INTERGENIC HET SNo: 1076, Mutant_ID: FN1261-S, Generation: M2, Mutations: 90, Genes: 20, Seed availability: Yes. FN3450-S.SNP.12:20787621 chr12:020787621 0 W/20787621-20787621 FN3450-S SNP T -> A AC=2;AN=184;BQB=0.545011;DP=2907;DP4=1537,1233,15,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=7.17918e-18;MQSB=0.994961;RPB=0.859542;SGB=92.0965;VDB=0.450969;EFF=INTERGENIC(MODIFIER||||||||||1) FN1156-S.SNP.12:20798378 chr12:020798378 0 W/20798378-20798378 FN1156-S Single Base Substitution A-T STOP_GAINED HOMO LOC_Os12g34310 OsFBX455 - F-box domain containing protein, expressed SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN690-S.SNP.12:20799558 chr12:020799558 0 W/20799558-20799558 FN690-S Single Base Substitution C-T INTERGENIC HOMO SNo: 621, Mutant_ID: FN690-S, Generation: M2, Mutations: 59, Genes: 24, Seed availability: Yes. FN548-S.SNP.12:20802048 chr12:020802048 0 W/20802048-20802048 FN548-S Single Base Substitution T-A SPLICE_SITE_REGION HOMO SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN-121.SNP.12:20810068 chr12:020810068 0 W/20810068-20810068 FN-121 Single Base Substitution C-T INTRON HET SNo: 121, Mutant_ID: FN-121, Generation: M2, Mutations: 62, Genes: 67, Seed availability: Yes. FN416-S.SNP.12:20826461 chr12:020826461 0 W/20826461-20826461 FN416-S Single Base Substitution A-T INTERGENIC HET SNo: 415, Mutant_ID: FN416-S, Generation: M2, Mutations: 79, Genes: 38, Seed availability: Yes. FN1269-S.SNP.12:20827046 chr12:020827046 0 W/20827046-20827046 FN1269-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN3983-S.SNP.12:20829209 chr12:020829209 0 W/20829209-20829209 FN3983-S SNP A -> G AC=2;AN=168;BQB=0.979833;DP=2525;DP4=769,1443,6,17;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.90223e-10;MQSB=0.940056;RPB=0.20547;SGB=14.2064;VDB=0.299469;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D79G|822|LOC_Os12g34360|protein_coding|CODING|LOC_Os12g34360.1|1|1) FN2297.SNP.12:20831831 chr12:020831831 0 W/20831831-20831831 FN2297 SNP A -> G AC=1;AN=192;BQB=0.253275;DP=4891;DP4=2316,2223,10,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58129e-12;MQSB=0.877484;RPB=0.721802;SGB=18.3052;VDB=0.735278;EFF=INTERGENIC(MODIFIER||||||||||1) FN454-S.SNP.12:20832275 chr12:020832275 0 W/20832275-20832275 FN454-S Single Base Substitution G-A INTERGENIC HET SNo: 453, Mutant_ID: FN454-S, Generation: M2, Mutations: 44, Genes: 12, Seed availability: Yes. FN1401-S.SNP.12:20832527 chr12:020832527 0 W/20832527-20832527 FN1401-S Single Base Substitution G-C INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN1652-S.SNP.12:20840590 chr12:020840590 0 W/20840590-20840590 FN1652-S Single Base Substitution C-G INTRON HET SNo: 1356, Mutant_ID: FN1652-S, Generation: M2, Mutations: 80, Genes: 30, Seed availability: Yes. FN711-S.SNP.12:20875092 chr12:020875092 0 W/20875092-20875092 FN711-S Single Base Substitution G-A INTERGENIC HET SNo: 640, Mutant_ID: FN711-S, Generation: M2, Mutations: 62, Genes: 92, Seed availability: Yes. FN2312.SNP.12:20875427 chr12:020875427 0 W/20875427-20875427 FN2312 SNP C -> T AC=1;AN=192;BQB=0.156967;DP=4708;DP4=2191,2208,9,6;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.44263e-06;MQSB=0.789395;RPB=0.977316;SGB=-15.333;VDB=0.987074;EFF=INTERGENIC(MODIFIER||||||||||1) FN923-S.SNP.12:20877032 chr12:020877032 0 W/20877032-20877032 FN923-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g34480 hypothetical protein SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN3626-S.SNP.12:20890979 chr12:020890979 0 W/20890979-20890979 FN3626-S SNP C -> A AC=1;AN=190;BQB=0.717361;DP=2704;DP4=1431,1061,17,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000369822;MQB=1.92522e-10;MQSB=0.563668;RPB=0.688722;SGB=49.1985;VDB=0.933007;EFF=INTRON(MODIFIER||||347|LOC_Os12g34524|protein_coding|CODING|LOC_Os12g34524.1|3|1) FN873-S.SNP.12:20898452 chr12:020898452 0 W/20898452-20898452 FN873-S Single Base Substitution C-T INTRON HET SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3368-S.SNP.12:20898814 chr12:020898814 0 W/20898814-20898814 FN3368-S SNP T -> C AC=2;AN=184;BQB=0.816183;DP=3564;DP4=1452,1932,19,26;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.80577e-21;MQSB=0.973996;RPB=0.326443;SGB=49.4124;VDB=0.150329;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agg/Ggg|R157G|347|LOC_Os12g34524|protein_coding|CODING|LOC_Os12g34524.1|3|1) FN3658-S.SNP.12:20902918 chr12:020902918 0 W/20902918-20902918 FN3658-S SNP G -> A AC=1;AN=190;BQB=0.976438;DP=2929;DP4=1372,1475,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.69406e-06;MQSB=0.949377;RPB=0.322393;SGB=44.5415;VDB=0.84546;EFF=INTERGENIC(MODIFIER||||||||||1) FN2365.SNP.12:20908486 chr12:020908486 0 W/20908486-20908486 FN2365 SNP T -> A AC=1;AN=192;BQB=0.680055;DP=4793;DP4=1897,2413,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.81144e-08;MQSB=0.61693;RPB=0.168998;SGB=67.4678;VDB=0.695632;EFF=INTERGENIC(MODIFIER||||||||||1) FN1745-S.SNP.12:20909684 chr12:020909684 0 W/20909684-20909684 FN1745-S SNP C -> T AC=1;AN=188;BQB=0.328768;DP=3926;DP4=1943,1949,14,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.39075e-08;MQSB=0.988824;RPB=0.999895;SGB=-38.278;VDB=0.993461;EFF=INTERGENIC(MODIFIER||||||||||1) FN1263-S.SNP.12:20916991 chr12:020916991 0 W/20916991-20916991 FN1263-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1078, Mutant_ID: FN1263-S, Generation: M2, Mutations: 79, Genes: 231, Seed availability: Yes. FN3711-S.SNP.12:20939291 chr12:020939291 0 W/20939291-20939291 FN3711-S SNP T -> A AC=1;AN=190;BQB=0.73999;DP=2666;DP4=1306,1271,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000183836;MQSB=0.844877;RPB=0.875633;SGB=10.8904;VDB=0.870652;EFF=INTERGENIC(MODIFIER||||||||||1) FN2753-S.SNP.12:20945927 chr12:020945927 0 W/20945927-20945927 FN2753-S SNP T -> A AC=2;AN=200;BQB=0.999528;DP=5203;DP4=2590,2377,22,23;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.76032e-26;MQSB=0.999684;RPB=0.99994;SGB=-46.3708;VDB=0.816738;EFF=INTERGENIC(MODIFIER||||||||||1) FN-177.SNP.12:20952341 chr12:020952341 0 W/20952341-20952341 FN-177 Single Base Substitution T-A INTERGENIC HOMO SNo: 177, Mutant_ID: FN-177, Generation: M2, Mutations: 36, Genes: 5, Seed availability: No. FN1460-S.SNP.12:20952821 chr12:020952821 0 W/20952821-20952821 FN1460-S Single Base Substitution A-C INTERGENIC Homo SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN745-S.SNP.12:20954630 chr12:020954630 0 W/20954630-20954630 FN745-S Single Base Substitution C-T INTERGENIC HET SNo: 669, Mutant_ID: FN745-S, Generation: M2, Mutations: 54, Genes: 70, Seed availability: Yes. FN2192-S.SNP.12:20955399 chr12:020955399 0 W/20955399-20955399 FN2192-S SNP T -> C AC=1;AN=190;BQB=0.965238;DP=4953;DP4=2274,2468,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.5537e-10;MQSB=0.965778;RPB=0.58974;SGB=76.4186;VDB=0.455826;EFF=INTERGENIC(MODIFIER||||||||||1) FN551-S.SNP.12:20957589 chr12:020957589 0 W/20957589-20957589 FN551-S Single Base Substitution T-C INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2671-S.SNP.12:20973096 chr12:020973096 0 W/20973096-20973096 FN2671-S SNP C -> T AC=1;AN=200;BQB=0.537284;DP=4105;DP4=2018,1896,4,8;HOB=5e-05;ICB=0.0001005;MQ=28;MQ0F=0.0457978;MQB=0.827837;MQSB=0;RPB=0.928329;SGB=49.6594;VDB=0.966159;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q335*|801|LOC_Os12g34610|protein_coding|CODING|LOC_Os12g34610.1|2|1);LOF=(LOC_Os12g34610|LOC_Os12g34610|1|1.00);NMD=(LOC_Os12g34610|LOC_Os12g34610|1|1.00) FN2194-S.SNP.12:20980727 chr12:020980727 0 W/20980727-20980727 FN2194-S SNP C -> G AC=2;AN=190;BQB=0.0939854;DP=3725;DP4=1147,2363,12,27;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000536913;MQB=5.19449e-21;MQSB=5.97287e-06;RPB=0.590684;SGB=172.05;VDB=0.692819;EFF=INTERGENIC(MODIFIER||||||||||1) FN1076-S.SNP.12:20981599 chr12:020981599 0 W/20981599-20981599 FN1076-S Single Base Substitution G-T INTERGENIC HET SNo: 963, Mutant_ID: FN1076-S, Generation: M2, Mutations: 63, Genes: 74, Seed availability: Yes. FN2129-S.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 FN2129-S SNP C -> T AC=2;AN=168;BQB=0.449779;DP=3610;DP4=1908,1621,35,31;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.98419e-38;MQSB=0.998951;RPB=0.806944;SGB=206.748;VDB=0.664759;EFF=INTERGENIC(MODIFIER||||||||||1) FN2344.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 FN2344 SNP C -> T AC=1;AN=192;BQB=0.558536;DP=5006;DP4=2651,2115,20,12;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=5.28537e-18;MQSB=0.856521;RPB=0.943481;SGB=-5.7391;VDB=0.967296;EFF=INTERGENIC(MODIFIER||||||||||1) FN2429.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 FN2429 SNP C -> T AC=1;AN=200;BQB=0.900721;DP=4819;DP4=2483,2092,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.34623e-12;MQSB=0.776436;RPB=0.487762;SGB=17.5158;VDB=0.15025;EFF=INTERGENIC(MODIFIER||||||||||1) FN2581-S.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 FN2581-S SNP C -> T AC=2;AN=186;BQB=0.81817;DP=3985;DP4=2090,1719,19,8;HOB=0.0212741;ICB=0.494682;MQ=49;MQ0F=0;MQB=2.89964e-14;MQSB=0.715331;RPB=0.783576;SGB=23.7055;VDB=0.512313;EFF=INTERGENIC(MODIFIER||||||||||1) FN715-S.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 FN715-S Single Base Substitution C-T INTERGENIC HET SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. W427-1-1.SNP.12:20982105 chr12:020982105 0 W/20982105-20982105 W427-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1412, Mutant_ID: W427-1-1, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN935-S.SNP.12:20986590 chr12:020986590 0 W/20986590-20986590 FN935-S Single Base Substitution G-A INTERGENIC HET SNo: 841, Mutant_ID: FN935-S, Generation: M2, Mutations: 53, Genes: 13, Seed availability: No. FN3429-S.SNP.12:20989512 chr12:020989512 0 W/20989512-20989512 FN3429-S SNP C -> T AC=1;AN=184;BQB=0.734174;DP=3806;DP4=1922,1814,5,6;HOB=5.90737e-05;ICB=0.00011879;MQ=33;MQ0F=0.112454;MQB=0.938078;MQSB=0.000592613;RPB=0.212193;SGB=44.2207;VDB=0.41544;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V109M|680|LOC_Os12g34630|protein_coding|CODING|LOC_Os12g34630.1|1|1) FN2265-S.SNP.12:20995856 chr12:020995856 0 W/20995856-20995856 FN2265-S SNP C -> A AC=1;AN=190;BQB=0.727501;DP=4653;DP4=2180,2083,14,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.16096e-11;MQSB=0.506012;RPB=0.778747;SGB=-12.1142;VDB=0.683574;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.12:20996112 chr12:020996112 0 W/20996112-20996112 FN1089-S Single Base Substitution T-C INTERGENIC HET SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN-296.SNP.12:20997080 chr12:020997080 0 W/20997080-20997080 FN-296 Single Base Substitution A-C INTERGENIC HET SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN3679-S.SNP.12:20997560 chr12:020997560 0 W/20997560-20997560 FN3679-S SNP C -> T AC=1;AN=190;BQB=0.629073;DP=2974;DP4=1557,1313,12,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.92384e-11;MQSB=0.929981;RPB=0.879645;SGB=76.4186;VDB=0.0286808;EFF=INTERGENIC(MODIFIER||||||||||1) FN-258.SNP.12:21000848 chr12:021000848 0 W/21000848-21000848 FN-258 Single Base Substitution T-C INTERGENIC HET SNo: 257, Mutant_ID: FN-258, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN2562-S.SNP.12:21002807 chr12:021002807 0 W/21002807-21002807 FN2562-S SNP C -> G AC=1;AN=188;BQB=0.708987;DP=3179;DP4=1626,1380,9,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.55548e-10;MQSB=0.736429;RPB=0.437637;SGB=68.91;VDB=0.165328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3296-S.SNP.12:21002996 chr12:021002996 0 W/21002996-21002996 FN3296-S SNP C -> T AC=2;AN=184;BQB=0.681054;DP=2647;DP4=1048,1461,6,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.24148e-07;MQSB=0.224787;RPB=0.705301;SGB=42.7914;VDB=0.244264;EFF=INTERGENIC(MODIFIER||||||||||1) FN2116-S.SNP.12:21003017 chr12:021003017 0 W/21003017-21003017 FN2116-S SNP C -> T AC=1;AN=168;BQB=0.711247;DP=1994;DP4=1097,818,9,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.03728e-07;MQSB=0.616109;RPB=0.296557;SGB=24.6155;VDB=0.861521;EFF=INTERGENIC(MODIFIER||||||||||1) FN-82.SNP.12:21004172 chr12:021004172 0 W/21004172-21004172 FN-82 Single Base Substitution G-C INTERGENIC HOMO SNo: 82, Mutant_ID: FN-82, Generation: M2, Mutations: 35, Genes: 78, Seed availability: Yes. FN974-S.SNP.12:21015219 chr12:021015219 0 W/21015219-21015219 FN974-S Single Base Substitution G-T INTERGENIC HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN1118-S.SNP.12:21019966 chr12:021019966 0 W/21019966-21019966 FN1118-S Single Base Substitution G-A INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN859-S.SNP.12:21020626 chr12:021020626 0 W/21020626-21020626 FN859-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g34640 hypothetical protein SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN1596-S.SNP.12:21024179 chr12:021024179 0 W/21024179-21024179 FN1596-S Single Base Substitution G-T INTERGENIC HET SNo: 1322, Mutant_ID: FN1596-S, Generation: M2, Mutations: 86, Genes: 34, Seed availability: Yes. FN3918-S.SNP.12:21027567 chr12:021027567 0 W/21027567-21027567 FN3918-S SNP T -> A AC=2;AN=158;BQB=0.907383;DP=2471;DP4=1278,1090,16,12;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.9549e-15;MQSB=0.985296;RPB=0.855924;SGB=84.6152;VDB=0.715099;EFF=INTERGENIC(MODIFIER||||||||||1) FN722-S.SNP.12:21028253 chr12:021028253 0 W/21028253-21028253 FN722-S Single Base Substitution C-A INTERGENIC HET SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2217-S.SNP.12:21031526 chr12:021031526 0 W/21031526-21031526 FN2217-S SNP C -> G AC=1;AN=190;BQB=0.954202;DP=4946;DP4=2327,2313,13,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000202184;MQB=5.96279e-10;MQSB=0.999796;RPB=0.398023;SGB=-11.5603;VDB=0.588452;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E1153Q|1631|LOC_Os12g34650|protein_coding|CODING|LOC_Os12g34650.1|5|1) FN2299.SNP.12:21034528 chr12:021034528 0 W/21034528-21034528 FN2299 SNP G -> A AC=1;AN=192;BQB=0.671712;DP=4454;DP4=1911,2270,12,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.03117e-09;MQSB=0.46816;RPB=0.986098;SGB=28.9139;VDB=0.636869;EFF=INTRON(MODIFIER||||1631|LOC_Os12g34650|protein_coding|CODING|LOC_Os12g34650.1|4|1) FN511-S.SNP.12:21039609 chr12:021039609 0 W/21039609-21039609 FN511-S Single Base Substitution T-C INTERGENIC HET SNo: 509, Mutant_ID: FN511-S, Generation: M2, Mutations: 61, Genes: 14, Seed availability: Yes. FN-16.SNP.12:21041086 chr12:021041086 0 W/21041086-21041086 FN-16 Single Base Substitution T-C INTERGENIC Homo SNo: 16, Mutant_ID: FN-16, Generation: M2, Mutations: 56, Genes: 34, Seed availability: Yes. FN2458.SNP.12:21045300 chr12:021045300 0 W/21045300-21045300 FN2458 SNP C -> A AC=1;AN=200;BQB=0.855051;DP=4997;DP4=2420,2322,11,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.0010006;MQB=3.06317e-16;MQSB=0.673498;RPB=0.291403;SGB=60.747;VDB=0.0233748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1301-S.SNP.12:21045410 chr12:021045410 0 W/21045410-21045410 FN1301-S Single Base Substitution C-T INTERGENIC HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN-192.SNP.12:21047078 chr12:021047078 0 W/21047078-21047078 FN-192 Single Base Substitution A-C SYNONYMOUS_CODING HET SNo: 192, Mutant_ID: FN-192, Generation: M2, Mutations: 53, Genes: 10, Seed availability: Yes. FN898-S.SNP.12:21056852 chr12:021056852 0 W/21056852-21056852 FN898-S Single Base Substitution T-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN3287-S.SNP.12:21057414 chr12:021057414 0 W/21057414-21057414 FN3287-S SNP C -> T AC=1;AN=184;BQB=0.884462;DP=2343;DP4=1077,1081,4,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000426803;MQB=2.3526e-06;MQSB=0.0563689;RPB=0.862628;SGB=62.3078;VDB=0.482854;EFF=INTERGENIC(MODIFIER||||||||||1) FN1754-S.SNP.12:21058683 chr12:021058683 0 W/21058683-21058683 FN1754-S SNP C -> A AC=1;AN=188;BQB=0.758355;DP=1985;DP4=1204,740,12,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.88551e-07;MQSB=0.0769093;RPB=0.217199;SGB=-13.9132;VDB=0.0457455;EFF=INTERGENIC(MODIFIER||||||||||1) FN2392.SNP.12:21060350 chr12:021060350 0 W/21060350-21060350 FN2392 SNP A -> G AC=2;AN=200;BQB=0.799395;DP=3974;DP4=1861,1846,22,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=5.21506e-20;MQSB=0.569081;RPB=0.573933;SGB=84.1935;VDB=0.38025;EFF=INTERGENIC(MODIFIER||||||||||1) FN2609-S.SNP.12:21060460 chr12:021060460 0 W/21060460-21060460 FN2609-S SNP G -> A AC=1;AN=198;BQB=0.802097;DP=3639;DP4=1671,1705,13,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.49456e-10;MQSB=0.654362;RPB=0.999628;SGB=44.9151;VDB=0.425266;EFF=INTERGENIC(MODIFIER||||||||||1) FN1316-S.SNP.12:21068215 chr12:021068215 0 W/21068215-21068215 FN1316-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g34700 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1119, Mutant_ID: FN1316-S, Generation: M2, Mutations: 51, Genes: 22, Seed availability: Yes. FN4047-S.SNP.12:21070179 chr12:021070179 0 W/21070179-21070179 FN4047-S SNP A -> G AC=1;AN=168;BQB=0.869153;DP=2549;DP4=943,1458,4,8;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0.0247156;MQB=0.00167594;MQSB=0.0122042;RPB=0.625543;SGB=47.7421;VDB=0.929681;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.12:21072166 chr12:021072166 0 W/21072166-21072166 FN3115-S SNP G -> C AC=1;AN=184;BQB=0.999948;DP=2710;DP4=1375,1235,11,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.33357e-11;MQSB=0.999962;RPB=0.94978;SGB=84.9167;VDB=0.0480033;EFF=INTERGENIC(MODIFIER||||||||||1) FN3966-S.SNP.12:21077445 chr12:021077445 0 W/21077445-21077445 FN3966-S SNP C -> T AC=1;AN=168;BQB=0.503254;DP=2725;DP4=1445,1184,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=46;MQ0F=0;MQB=0.00254675;MQSB=1.55104e-07;RPB=0.666964;SGB=31.3172;VDB=0.325127;EFF=INTERGENIC(MODIFIER||||||||||1) FN1339-S.SNP.12:21084237 chr12:021084237 0 W/21084237-21084237 FN1339-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1140, Mutant_ID: FN1339-S, Generation: M2, Mutations: 87, Genes: 18, Seed availability: Yes. FN2582-S.SNP.12:21085357 chr12:021085357 0 W/21085357-21085357 FN2582-S SNP A -> G AC=1;AN=198;BQB=0.95565;DP=4285;DP4=2005,2034,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.18583e-07;MQSB=0.96881;RPB=0.992199;SGB=2.96892;VDB=0.303442;EFF=INTERGENIC(MODIFIER||||||||||1) FN-211.SNP.12:21086540 chr12:021086540 0 W/21086540-21086540 FN-211 Single Base Substitution G-T INTERGENIC HET SNo: 210, Mutant_ID: FN-211, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN3792-S.SNP.12:21090737 chr12:021090737 0 W/21090737-21090737 FN3792-S SNP C -> G AC=2;AN=190;BQB=0.994611;DP=2681;DP4=1432,1148,10,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.59419e-14;MQSB=0.58447;RPB=0.732813;SGB=117.403;VDB=0.181268;EFF=INTERGENIC(MODIFIER||||||||||1) FN1011-S.SNP.12:21096316 chr12:021096316 0 W/21096316-21096316 FN1011-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN-100.SNP.12:21099208 chr12:021099208 0 W/21099208-21099208 FN-100 Single Base Substitution G-A INTERGENIC HOMO SNo: 100, Mutant_ID: FN-100, Generation: M2, Mutations: 76, Genes: 29, Seed availability: Yes. CW-631-3-1.SNP.12:21099614 chr12:021099614 0 W/21099614-21099614 CW-631-3-1 Single Base Substitution A-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2410.SNP.12:21099668 chr12:021099668 0 W/21099668-21099668 FN2410 SNP T -> A AC=1;AN=200;BQB=0.529774;DP=4675;DP4=2115,2227,17,24;HOB=5e-05;ICB=0.0001005;MQ=45;MQ0F=0.00342246;MQB=1.20049e-09;MQSB=0.386561;RPB=0.456927;SGB=92.009;VDB=0.230564;EFF=INTERGENIC(MODIFIER||||||||||1) FN2474.SNP.12:21122592 chr12:021122592 0 W/21122592-21122592 FN2474 SNP A -> G AC=1;AN=200;BQB=0.936943;DP=3127;DP4=1388,1129,14,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=3.58015e-08;MQSB=0.171851;RPB=0.838112;SGB=14.3054;VDB=0.423921;EFF=INTERGENIC(MODIFIER||||||||||1) FN670-S.SNP.12:21123757 chr12:021123757 0 W/21123757-21123757 FN670-S Single Base Substitution C-A INTERGENIC HOMO SNo: 606, Mutant_ID: FN670-S, Generation: M2, Mutations: 89, Genes: 70, Seed availability: Yes. FN404-S.SNP.12:21162305 chr12:021162305 0 W/21162305-21162305 FN404-S Single Base Substitution T-C INTERGENIC HET SNo: 395, Mutant_ID: FN404-S, Generation: M2, Mutations: 59, Genes: 10, Seed availability: Yes. FN570-S.SNP.12:21167618 chr12:021167618 0 W/21167618-21167618 FN570-S Single Base Substitution C-A INTERGENIC HET SNo: 561, Mutant_ID: FN570-S, Generation: M2, Mutations: 42, Genes: 15, Seed availability: Yes. FN3900-S.SNP.12:21168045 chr12:021168045 0 W/21168045-21168045 FN3900-S SNP T -> C AC=1;AN=158;BQB=0.984919;DP=2420;DP4=1149,1178,4,9;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.6628e-07;MQSB=0.888297;RPB=0.816685;SGB=51.4366;VDB=0.409779;EFF=INTERGENIC(MODIFIER||||||||||1) FN2234-S.SNP.12:21172722 chr12:021172722 0 W/21172722-21172722 FN2234-S SNP G -> C AC=1;AN=190;BQB=0.729833;DP=4705;DP4=2066,2289,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00021254;MQB=1.07028e-07;MQSB=0.999969;RPB=0.364082;SGB=32.5467;VDB=0.393;EFF=INTERGENIC(MODIFIER||||||||||1) FN4202-S.SNP.12:21183679 chr12:021183679 0 W/21183679-21183679 FN4202-S SNP C -> T AC=2;AN=170;BQB=0.367575;DP=2297;DP4=1261,949,28,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.15021e-22;MQSB=0.990894;RPB=0.834079;SGB=138.716;VDB=0.920176;EFF=INTERGENIC(MODIFIER||||||||||1) FN751-S.SNP.12:21186410 chr12:021186410 0 W/21186410-21186410 FN751-S Single Base Substitution T-A INTERGENIC HET SNo: 673, Mutant_ID: FN751-S, Generation: M2, Mutations: 56, Genes: 18, Seed availability: Yes. FN565-S.SNP.12:21187700 chr12:021187700 0 W/21187700-21187700 FN565-S Single Base Substitution C-T INTRON HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN4104-S.SNP.12:21190553 chr12:021190553 0 W/21190553-21190553 FN4104-S SNP G -> A AC=1;AN=182;BQB=0.94968;DP=3319;DP4=1405,1799,10,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.49677e-10;MQSB=0.999901;RPB=0.998605;SGB=46.1603;VDB=0.376446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-210.SNP.12:21191448 chr12:021191448 0 W/21191448-21191448 FN-210 Single Base Substitution T-A INTERGENIC HET SNo: 209, Mutant_ID: FN-210, Generation: M2, Mutations: 46, Genes: 64, Seed availability: Yes. FN3474-S.SNP.12:21194615 chr12:021194615 0 W/21194615-21194615 FN3474-S SNP C -> T AC=2;AN=184;BQB=0.956557;DP=2453;DP4=1138,1241,5,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.90364e-15;MQSB=0.976379;RPB=0.999877;SGB=103.004;VDB=0.301053;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.12:21203347 chr12:021203347 0 W/21203347-21203347 FN1217-S Single Base Substitution C-A INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1519-S.SNP.12:21207814 chr12:021207814 0 W/21207814-21207814 FN1519-S Single Base Substitution A-G INTRON HET SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN412-S.SNP.12:21208496 chr12:021208496 0 W/21208496-21208496 FN412-S Single Base Substitution C-G INTRON HET SNo: 411, Mutant_ID: FN412-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN2311.SNP.12:21210198 chr12:021210198 0 W/21210198-21210198 FN2311 SNP T -> A AC=1;AN=192;BQB=0.743731;DP=4867;DP4=2388,2300,6,3;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205465;MQB=4.98443e-06;MQSB=0.991946;RPB=0.996128;SGB=35.5177;VDB=0.729265;EFF=UTR_3_PRIME(MODIFIER||220||450|LOC_Os12g34840|protein_coding|CODING|LOC_Os12g34840.1|5|1) FN1015-S.SNP.12:21210817 chr12:021210817 0 W/21210817-21210817 FN1015-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g34850 Fibronectin type III domain containing protein, expressed SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN2492.SNP.12:21210817 chr12:021210817 0 W/21210817-21210817 FN2492 SNP G -> A AC=1;AN=200;BQB=0.979;DP=4653;DP4=2046,2322,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.84765e-10;MQSB=0.971905;RPB=0.751966;SGB=91.1059;VDB=0.164309;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R671C|707|LOC_Os12g34850|protein_coding|CODING|LOC_Os12g34850.1|4|1) FN2397.SNP.12:21214458 chr12:021214458 0 W/21214458-21214458 FN2397 SNP A -> G AC=1;AN=200;BQB=0.983486;DP=3930;DP4=1758,1861,18,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.79243e-14;MQSB=0.0182012;RPB=0.283757;SGB=55.5366;VDB=0.0067685;EFF=INTRON(MODIFIER||||707|LOC_Os12g34850|protein_coding|CODING|LOC_Os12g34850.1|1|1) FN2324.SNP.12:21236693 chr12:021236693 0 W/21236693-21236693 FN2324 SNP A -> C AC=2;AN=192;BQB=0.660906;DP=5324;DP4=2556,2337,17,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=7.34559e-16;MQSB=0.218334;RPB=0.663452;SGB=33.9487;VDB=0.507489;EFF=INTERGENIC(MODIFIER||||||||||1) FN946-S.SNP.12:21241401 chr12:021241401 0 W/21241401-21241401 FN946-S Single Base Substitution A-G INTRON HET SNo: 852, Mutant_ID: FN946-S, Generation: M2, Mutations: 51, Genes: 26, Seed availability: Yes. FN4023-S.SNP.12:21241568 chr12:021241568 0 W/21241568-21241568 FN4023-S SNP A -> G AC=1;AN=168;BQB=0.998393;DP=2517;DP4=1249,1156,6,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.86718e-09;MQSB=0.9082;RPB=0.291416;SGB=41.6096;VDB=0.538056;EFF=SYNONYMOUS_CODING(LOW|SILENT|agT/agC|S52|144|LOC_Os12g34890|protein_coding|CODING|LOC_Os12g34890.1|2|1) FN1440-S.SNP.12:21244169 chr12:021244169 0 W/21244169-21244169 FN1440-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1211, Mutant_ID: FN1440-S, Generation: M2, Mutations: 61, Genes: 9, Seed availability: Yes. FN436-S.SNP.12:21251667 chr12:021251667 0 W/21251667-21251667 FN436-S Single Base Substitution C-T INTERGENIC HET SNo: 435, Mutant_ID: FN436-S, Generation: M2, Mutations: 58, Genes: 15, Seed availability: Yes. FN1617-S.SNP.12:21252615 chr12:021252615 0 W/21252615-21252615 FN1617-S Single Base Substitution A-G INTERGENIC HET SNo: 1330, Mutant_ID: FN1617-S, Generation: M2, Mutations: 91, Genes: 29, Seed availability: Yes. FN2310.SNP.12:21260258 chr12:021260258 0 W/21260258-21260258 FN2310 SNP G -> A AC=1;AN=192;BQB=0.994315;DP=4898;DP4=2156,2357,12,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.15508e-13;MQSB=0.745466;RPB=0.774067;SGB=24.5626;VDB=0.816619;EFF=INTERGENIC(MODIFIER||||||||||1) FN547-S.SNP.12:21264339 chr12:021264339 0 W/21264339-21264339 FN547-S Single Base Substitution G-A INTERGENIC HET SNo: 542, Mutant_ID: FN547-S, Generation: M2, Mutations: 56, Genes: 174, Seed availability: Yes. FN2096-S.SNP.12:21267616 chr12:021267616 0 W/21267616-21267616 FN2096-S SNP T -> A AC=1;AN=168;BQB=0.583405;DP=3930;DP4=1853,2029,20,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.29043e-13;MQSB=0.969387;RPB=0.514726;SGB=-128.892;VDB=0.503448;EFF=INTERGENIC(MODIFIER||||||||||1) FN3844-S.SNP.12:21277143 chr12:021277143 0 W/21277143-21277143 FN3844-S SNP A -> T AC=1;AN=190;BQB=0.806881;DP=2991;DP4=1177,1631,7,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000334336;MQB=3.88862e-09;MQSB=0.912421;RPB=0.694756;SGB=43.2083;VDB=0.726376;EFF=STOP_GAINED(HIGH|NONSENSE|tTa/tAa|L314*|1567|LOC_Os12g34950|protein_coding|CODING|LOC_Os12g34950.1|2|1);LOF=(LOC_Os12g34950|LOC_Os12g34950|1|1.00);NMD=(LOC_Os12g34950|LOC_Os12g34950|1|1.00) FN2184-S.SNP.12:21287696 chr12:021287696 0 W/21287696-21287696 FN2184-S SNP T -> C AC=1;AN=190;BQB=0.270092;DP=5046;DP4=2118,2632,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.76355e-06;MQSB=0.673426;RPB=0.743254;SGB=28.7675;VDB=0.768927;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.12:21288350 chr12:021288350 0 W/21288350-21288350 FN1332-S Single Base Substitution C-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN-145.SNP.12:21288845 chr12:021288845 0 W/21288845-21288845 FN-145 Single Base Substitution A-G INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN3552-S.SNP.12:21289054 chr12:021289054 0 W/21289054-21289054 FN3552-S SNP C -> G AC=1;AN=188;BQB=0.282152;DP=3022;DP4=1243,1084,5,8;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.0193664;MQSB=7.76658e-08;RPB=0.385655;SGB=35.9843;VDB=0.62773;EFF=INTERGENIC(MODIFIER||||||||||1) FN1488-S.SNP.12:21300383 chr12:021300383 0 W/21300383-21300383 FN1488-S Single Base Substitution A-G INTERGENIC HET SNo: 1251, Mutant_ID: FN1488-S, Generation: M2, Mutations: 89, Genes: 10, Seed availability: Yes. FN466-S.SNP.12:21305451 chr12:021305451 0 W/21305451-21305451 FN466-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g35000 retrotransposon protein, putative, unclassified, expressed SNo: 465, Mutant_ID: FN466-S, Generation: M2, Mutations: 61, Genes: 22, Seed availability: Yes. FN2707-S.SNP.12:21310611 chr12:021310611 0 W/21310611-21310611 FN2707-S SNP C -> A AC=1;AN=200;BQB=0.00261101;DP=5167;DP4=2346,2510,8,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.70911e-07;MQSB=0.997465;RPB=0.354272;SGB=68.0801;VDB=0.620972;EFF=INTRON(MODIFIER||||415|LOC_Os12g35010|protein_coding|CODING|LOC_Os12g35010.1|4|1) FN671-S.SNP.12:21323821 chr12:021323821 0 W/21323821-21323821 FN671-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 607, Mutant_ID: FN671-S, Generation: M2, Mutations: 69, Genes: 8, Seed availability: Yes. FN3546-S.SNP.12:21326472 chr12:021326472 0 W/21326472-21326472 FN3546-S SNP C -> T AC=1;AN=188;BQB=0.902369;DP=2618;DP4=1302,1259,4,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000794324;MQSB=0.999644;RPB=0.92492;SGB=26.2637;VDB=0.823644;EFF=SYNONYMOUS_CODING(LOW|SILENT|acG/acA|T147|442|LOC_Os12g35040|protein_coding|CODING|LOC_Os12g35040.1|3|1) FN-402.SNP.12:21339956 chr12:021339956 0 W/21339956-21339956 FN-402 Single Base Substitution A-C INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN2551-S.SNP.12:21339990 chr12:021339990 0 W/21339990-21339990 FN2551-S SNP T -> C AC=1;AN=198;BQB=0.960894;DP=4105;DP4=1837,2070,15,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.41439e-13;MQSB=0.617602;RPB=0.498581;SGB=52.7004;VDB=0.131345;EFF=INTERGENIC(MODIFIER||||||||||1) FN3791-S.SNP.12:21359342 chr12:021359342 0 W/21359342-21359342 FN3791-S SNP T -> C AC=1;AN=190;BQB=0.918647;DP=3133;DP4=1441,1360,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0114906;MQB=4.48589e-06;MQSB=0.91793;RPB=0.969936;SGB=-36.3245;VDB=0.323427;EFF=INTRON(MODIFIER||||1756|LOC_Os12g35110|protein_coding|CODING|LOC_Os12g35110.1|1|1) FN3484-S.SNP.12:21362824 chr12:021362824 0 W/21362824-21362824 FN3484-S SNP C -> T AC=1;AN=184;BQB=0.981393;DP=3609;DP4=1813,1654,9,6;HOB=5.90737e-05;ICB=0.00011879;MQ=39;MQ0F=0.0545858;MQB=0.163295;MQSB=1.11628e-17;RPB=0.98775;SGB=62.3078;VDB=0.676733;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgg/Tgg|R1060W|1756|LOC_Os12g35110|protein_coding|CODING|LOC_Os12g35110.1|4|1) FN1058-S.SNP.12:21365985 chr12:021365985 0 W/21365985-21365985 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN3592-S.SNP.12:21371881 chr12:021371881 0 W/21371881-21371881 FN3592-S SNP C -> T AC=1;AN=188;BQB=0.961163;DP=2891;DP4=1348,1486,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=30;MQ0F=0.1688;MQB=0.933716;MQSB=0;RPB=0.491714;SGB=32.441;VDB=0.399491;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P779S|800|LOC_Os12g35120|protein_coding|CODING|LOC_Os12g35120.1|4|1) W500-4-7-1.SNP.12:21373926 chr12:021373926 0 W/21373926-21373926 W500-4-7-1 Single Base Substitution G-T INTERGENIC HET SNo: 1423, Mutant_ID: W500-4-7-1, Generation: M2, Mutations: 59, Genes: 115, Seed availability: No. FN1106-S.SNP.12:21373978 chr12:021373978 0 W/21373978-21373978 FN1106-S Single Base Substitution G-T INTERGENIC HET SNo: 980, Mutant_ID: FN1106-S, Generation: M2, Mutations: 88, Genes: 108, Seed availability: Yes. FN1622-S.SNP.12:21377748 chr12:021377748 0 W/21377748-21377748 FN1622-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g35130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1333, Mutant_ID: FN1622-S, Generation: M2, Mutations: 72, Genes: 27, Seed availability: Yes. FN-55.SNP.12:21378162 chr12:021378162 0 W/21378162-21378162 FN-55 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 55, Mutant_ID: FN-55, Generation: M2, Mutations: 39, Genes: 14, Seed availability: Yes. FN_831-4-1.SNP.12:21395444 chr12:021395444 0 W/21395444-21395444 FN_831-4-1 Single Base Substitution A-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN_831-4-1.SNP.12:21395445 chr12:021395445 0 W/21395445-21395445 FN_831-4-1 Single Base Substitution A-T Homo SNo: 1499, Mutant_ID: FN_831-4-1, Generation: M3, Mutations: 52, Genes: 64, Seed availability: Yes. FN_1017-1.SNP.12:21395849 chr12:021395849 0 W/21395849-21395849 FN_1017-1 Single Base Substitution G-A HET SNo: 1395, Mutant_ID: FN_1017-1, Generation: M3, Mutations: 78, Genes: 147, Seed availability: No. FN899-S.SNP.12:21403139 chr12:021403139 0 W/21403139-21403139 FN899-S Single Base Substitution C-T INTERGENIC HET SNo: 805, Mutant_ID: FN899-S, Generation: M2, Mutations: 95, Genes: 62, Seed availability: Yes. FN4025-S.SNP.12:21403619 chr12:021403619 0 W/21403619-21403619 FN4025-S SNP G -> A AC=1;AN=168;BQB=0.997806;DP=4605;DP4=2297,2148,12,7;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0238871;MQB=0.00026128;MQSB=3.67704e-07;RPB=0.924709;SGB=55.3328;VDB=0.66569;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T230I|278|LOC_Os12g35200|protein_coding|CODING|LOC_Os12g35200.1|1|1) FN495-S.SNP.12:21426081 chr12:021426081 0 W/21426081-21426081 FN495-S Single Base Substitution G-T INTERGENIC HOMO SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN927-S.SNP.12:21426081 chr12:021426081 0 W/21426081-21426081 FN927-S Single Base Substitution G-T INTERGENIC HOMO SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2332.SNP.12:21426316 chr12:021426316 0 W/21426316-21426316 FN2332 SNP C -> T AC=1;AN=192;BQB=0.00101014;DP=4915;DP4=2168,2391,15,11;HOB=5.42535e-05;ICB=0.000109072;MQ=44;MQ0F=0.00528993;MQB=0.273062;MQSB=0.554023;RPB=0.978188;SGB=-70.2434;VDB=0.966839;EFF=INTERGENIC(MODIFIER||||||||||1) FN-13.SNP.12:21433094 chr12:021433094 0 W/21433094-21433094 FN-13 Single Base Substitution C-T INTRON HET SNo: 13, Mutant_ID: FN-13, Generation: M2, Mutations: 63, Genes: 24, Seed availability: Yes. FN3452-S.SNP.12:21435388 chr12:021435388 0 W/21435388-21435388 FN3452-S SNP C -> T AC=1;AN=184;BQB=0.89856;DP=4148;DP4=1959,2090,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=22;MQ0F=0.220588;MQB=0.451834;MQSB=0;RPB=0.497154;SGB=30.8405;VDB=0.685519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A330V|1452|LOC_Os12g35280|protein_coding|CODING|LOC_Os12g35280.1|2|1) FN3401-S.SNP.12:21436834 chr12:021436834 0 W/21436834-21436834 FN3401-S SNP G -> A AC=2;AN=184;BQB=0.970537;DP=4582;DP4=1988,2473,15,25;HOB=0.0215028;ICB=0.494625;MQ=13;MQ0F=0.377346;MQB=0.00209971;MQSB=0;RPB=0.277937;SGB=175.352;VDB=0.492024;EFF=INTRON(MODIFIER||||1452|LOC_Os12g35280|protein_coding|CODING|LOC_Os12g35280.1|2|1) FN3733-S.SNP.12:21438780 chr12:021438780 0 W/21438780-21438780 FN3733-S SNP G -> A AC=1;AN=190;BQB=0.890862;DP=2348;DP4=997,1261,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0455707;MQB=0.991743;MQSB=2.06633e-07;RPB=0.354585;SGB=33.8752;VDB=0.866989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G1437S|1452|LOC_Os12g35280|protein_coding|CODING|LOC_Os12g35280.1|3|1) FN3545-S.SNP.12:21446433 chr12:021446433 0 W/21446433-21446433 FN3545-S SNP G -> C AC=1;AN=188;BQB=0.959263;DP=2741;DP4=1388,1290,7,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.80791e-09;MQSB=0.992358;RPB=0.217228;SGB=35.9843;VDB=0.397552;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Cag|E403Q|610|LOC_Os12g35290|protein_coding|CODING|LOC_Os12g35290.1|10|1) FN3824-S.SNP.12:21450047 chr12:021450047 0 W/21450047-21450047 FN3824-S SNP C -> G AC=1;AN=190;BQB=0.361887;DP=2942;DP4=1379,1454,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000339905;MQB=9.20016e-08;MQSB=0.926333;RPB=0.520349;SGB=33.8752;VDB=0.563486;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.12:21452507 chr12:021452507 0 W/21452507-21452507 FN3407-S SNP C -> A AC=1;AN=184;BQB=0.540401;DP=2851;DP4=1306,1478,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.09866e-06;MQSB=0.910059;RPB=0.759824;SGB=30.6558;VDB=0.414968;EFF=INTERGENIC(MODIFIER||||||||||1) FN3407-S.SNP.12:21452508 chr12:021452508 0 W/21452508-21452508 FN3407-S SNP C -> T AC=1;AN=184;BQB=0.997742;DP=2845;DP4=1277,1487,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=9.82974e-06;MQSB=0.951517;RPB=0.705143;SGB=30.6558;VDB=0.417295;EFF=INTERGENIC(MODIFIER||||||||||1) FN1043-S.SNP.12:21458992 chr12:021458992 0 W/21458992-21458992 FN1043-S Single Base Substitution T-C INTRON HET SNo: 938, Mutant_ID: FN1043-S, Generation: M2, Mutations: 35, Genes: 19, Seed availability: Yes. FN-62.SNP.12:21462263 chr12:021462263 0 W/21462263-21462263 FN-62 Single Base Substitution C-T INTERGENIC HET SNo: 62, Mutant_ID: FN-62, Generation: M2, Mutations: 41, Genes: 9, Seed availability: Yes. FN4305-S.SNP.12:21466907 chr12:021466907 0 W/21466907-21466907 FN4305-S SNP G -> C AC=2;AN=170;BQB=0.970595;DP=2505;DP4=1009,1397,9,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.11729e-18;MQSB=0.970918;RPB=0.882645;SGB=123.397;VDB=0.761829;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.12:21469948 chr12:021469948 0 W/21469948-21469948 FN-184 Single Base Substitution G-A INTERGENIC HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN4247-S.SNP.12:21473627 chr12:021473627 0 W/21473627-21473627 FN4247-S SNP T -> C AC=1;AN=170;BQB=0.80722;DP=1802;DP4=631,1039,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000154558;MQSB=0.992268;RPB=0.932232;SGB=10.1134;VDB=0.675225;EFF=INTERGENIC(MODIFIER||||||||||1) FN3830-S.SNP.12:21475791 chr12:021475791 0 W/21475791-21475791 FN3830-S SNP T -> G AC=1;AN=190;BQB=0.991882;DP=2673;DP4=1351,1240,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.44047e-08;MQSB=0.960431;RPB=0.325765;SGB=62.7569;VDB=0.124328;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.12:21475947 chr12:021475947 0 W/21475947-21475947 FN3921-S SNP C -> T AC=1;AN=158;BQB=0.617438;DP=2397;DP4=1070,1230,7,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.73184e-07;MQSB=0.967657;RPB=0.536185;SGB=60.1755;VDB=0.585101;EFF=INTERGENIC(MODIFIER||||||||||1) FN2547-S.SNP.12:21476143 chr12:021476143 0 W/21476143-21476143 FN2547-S SNP C -> A AC=1;AN=198;BQB=0.671099;DP=4242;DP4=2125,1841,6,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=0.000197123;MQSB=0.58291;RPB=0.158552;SGB=-3.4115;VDB=0.0457323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.12:21480652 chr12:021480652 0 W/21480652-21480652 FN2731-S SNP G -> C AC=2;AN=200;BQB=0.846078;DP=5130;DP4=2394,2462,28,20;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0.000194932;MQB=4.60063e-27;MQSB=0.987602;RPB=0.853258;SGB=5.04487;VDB=0.275164;EFF=UTR_3_PRIME(MODIFIER||96||104|LOC_Os12g35340|protein_coding|CODING|LOC_Os12g35340.1|1|1) FN3819-S.SNP.12:21486168 chr12:021486168 0 W/21486168-21486168 FN3819-S SNP C -> T AC=1;AN=190;BQB=0.945574;DP=2884;DP4=1419,1374,6,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.12293e-08;MQSB=0.388921;RPB=0.999345;SGB=53.6492;VDB=0.67854;EFF=INTERGENIC(MODIFIER||||||||||1) FN2789-S.SNP.12:21486420 chr12:021486420 0 W/21486420-21486420 FN2789-S SNP G -> A AC=2;AN=198;BQB=0.402717;DP=4208;DP4=1878,2008,17,20;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.97208e-22;MQSB=0.724636;RPB=0.28678;SGB=39.6567;VDB=0.533839;EFF=INTERGENIC(MODIFIER||||||||||1) FN-268.SNP.12:21487565 chr12:021487565 0 W/21487565-21487565 FN-268 Single Base Substitution A-T INTERGENIC HOMO SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN2538-S.SNP.12:21494824 chr12:021494824 0 W/21494824-21494824 FN2538-S SNP C -> T AC=2;AN=198;BQB=0.902088;DP=4135;DP4=1876,1972,25,31;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=4.77928e-28;MQSB=0.708645;RPB=0.995759;SGB=130.554;VDB=0.144741;EFF=INTRON(MODIFIER||||929|LOC_Os12g35360|protein_coding|CODING|LOC_Os12g35360.1|18|1) FN882-S.SNP.12:21498583 chr12:021498583 0 W/21498583-21498583 FN882-S Single Base Substitution T-C INTRON HET SNo: 788, Mutant_ID: FN882-S, Generation: M2, Mutations: 51, Genes: 196, Seed availability: Yes. FN2151-S.SNP.12:21501132 chr12:021501132 0 W/21501132-21501132 FN2151-S SNP A -> G AC=2;AN=168;BQB=0.00187023;DP=3219;DP4=2027,1138,25,18;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.573e-13;MQSB=0.94074;RPB=0.326887;SGB=-289.151;VDB=0.172009;EFF=INTERGENIC(MODIFIER||||||||||1) FN3951-S.SNP.12:21505600 chr12:021505600 0 W/21505600-21505600 FN3951-S SNP T -> C AC=1;AN=168;BQB=0.55528;DP=2346;DP4=1467,805,14,1;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.17345e-06;MQSB=0.077489;RPB=0.884575;SGB=61.0344;VDB=0.862478;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaT/gaC|D2|785|LOC_Os12g35370|protein_coding|CODING|LOC_Os12g35370.1|1|1) FN2314.SNP.12:21505973 chr12:021505973 0 W/21505973-21505973 FN2314 SNP A -> G AC=1;AN=192;BQB=0.998479;DP=4603;DP4=2214,2099,11,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=4.04781e-10;MQSB=0.79987;RPB=0.897485;SGB=36.607;VDB=0.556287;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D88G|785|LOC_Os12g35370|protein_coding|CODING|LOC_Os12g35370.1|2|1) FN2704-S.SNP.12:21509476 chr12:021509476 0 W/21509476-21509476 FN2704-S SNP C -> A AC=1;AN=200;BQB=0.999492;DP=4235;DP4=2011,2030,2,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.91502e-05;MQSB=0.206999;RPB=0.708937;SGB=26.6347;VDB=0.288755;EFF=INTERGENIC(MODIFIER||||||||||1) FN505-S.SNP.12:21511317 chr12:021511317 0 W/21511317-21511317 FN505-S Single Base Substitution G-A INTERGENIC HOMO SNo: 503, Mutant_ID: FN505-S, Generation: M2, Mutations: 84, Genes: 44, Seed availability: No. FN594-S.SNP.12:21511422 chr12:021511422 0 W/21511422-21511422 FN594-S Single Base Substitution G-A INTERGENIC HET SNo: 578, Mutant_ID: FN594-S, Generation: M2, Mutations: 51, Genes: 11, Seed availability: Yes. FN434-S.SNP.12:21511518 chr12:021511518 0 W/21511518-21511518 FN434-S Single Base Substitution A-T INTERGENIC HET SNo: 433, Mutant_ID: FN434-S, Generation: M2, Mutations: 60, Genes: 33, Seed availability: Yes. FN3518-S.SNP.12:21523172 chr12:021523172 0 W/21523172-21523172 FN3518-S SNP G -> A AC=1;AN=188;BQB=0.181731;DP=2953;DP4=1359,1395,3,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.33668e-05;MQSB=0.970669;RPB=0.421294;SGB=28.8977;VDB=0.904869;EFF=INTERGENIC(MODIFIER||||||||||1) FN724-S.SNP.12:21523842 chr12:021523842 0 W/21523842-21523842 FN724-S Single Base Substitution A-T INTERGENIC HOMO SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN920-S.SNP.12:21524734 chr12:021524734 0 W/21524734-21524734 FN920-S Single Base Substitution T-C INTERGENIC HET SNo: 826, Mutant_ID: FN920-S, Generation: M2, Mutations: 68, Genes: 33, Seed availability: Yes. FN2671-S.SNP.12:21534268 chr12:021534268 0 W/21534268-21534268 FN2671-S SNP A -> G AC=1;AN=200;BQB=0.772824;DP=5239;DP4=2706,2282,5,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.68242e-10;MQSB=0.989466;RPB=0.993809;SGB=-14.3206;VDB=0.993799;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtC|V744|1025|LOC_Os12g35410|protein_coding|CODING|LOC_Os12g35410.1|7|1) FN4024-S.SNP.12:21536858 chr12:021536858 0 W/21536858-21536858 FN4024-S SNP A -> T AC=1;AN=168;BQB=0.982381;DP=2655;DP4=1323,1248,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.42665e-07;MQSB=0.99592;RPB=0.0461884;SGB=47.7421;VDB=0.261515;EFF=INTRON(MODIFIER||||1025|LOC_Os12g35410|protein_coding|CODING|LOC_Os12g35410.1|4|1) FN4304-S.SNP.12:21541257 chr12:021541257 0 W/21541257-21541257 FN4304-S SNP C -> A AC=1;AN=170;BQB=0.992398;DP=2476;DP4=1424,907,4,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0.000807754;MQB=0.000245761;MQSB=9.43295e-05;RPB=0.944018;SGB=38.987;VDB=0.568714;EFF=INTERGENIC(MODIFIER||||||||||1) FN957-S.SNP.12:21541395 chr12:021541395 0 W/21541395-21541395 FN957-S Single Base Substitution G-A INTERGENIC HOMO SNo: 862, Mutant_ID: FN957-S, Generation: M2, Mutations: 71, Genes: 15, Seed availability: Yes. FN1304-S.SNP.12:21543613 chr12:021543613 0 W/21543613-21543613 FN1304-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2655-S.SNP.12:21544165 chr12:021544165 0 W/21544165-21544165 FN2655-S SNP C -> G AC=1;AN=200;BQB=0.851207;DP=4705;DP4=2280,2194,9,15;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0418704;MQB=0.999486;MQSB=4.63806e-25;RPB=0.631261;SGB=19.1209;VDB=0.995989;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaG|N244K|685|LOC_Os12g35430|protein_coding|CODING|LOC_Os12g35430.1|3|1) FN3504-S.SNP.12:21551763 chr12:021551763 0 W/21551763-21551763 FN3504-S SNP T -> C AC=1;AN=188;BQB=0.768909;DP=3456;DP4=1465,1881,6,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.53782e-05;MQSB=0.923627;RPB=0.996573;SGB=25.3545;VDB=0.610755;EFF=INTERGENIC(MODIFIER||||||||||1) FN2663-S.SNP.12:21554003 chr12:021554003 0 W/21554003-21554003 FN2663-S SNP A -> T AC=2;AN=200;BQB=0.984915;DP=4733;DP4=2214,2312,22,15;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.00297e-21;MQSB=0.984804;RPB=0.612929;SGB=81.5883;VDB=0.584244;EFF=INTERGENIC(MODIFIER||||||||||1) FN1217-S.SNP.12:21558308 chr12:021558308 0 W/21558308-21558308 FN1217-S Single Base Substitution G-A INTRON HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1195-S.SNP.12:21558925 chr12:021558925 0 W/21558925-21558925 FN1195-S Single Base Substitution C-T INTRON HET SNo: 1028, Mutant_ID: FN1195-S, Generation: M2, Mutations: 81, Genes: 22, Seed availability: Yes. FN2407.SNP.12:21565802 chr12:021565802 0 W/21565802-21565802 FN2407 SNP G -> T AC=2;AN=200;BQB=0.999924;DP=4889;DP4=2414,2207,31,23;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0.00143179;MQB=5.64733e-16;MQSB=1.03214e-08;RPB=0.860276;SGB=8.67589;VDB=0.458116;EFF=INTRON(MODIFIER||||908|LOC_Os12g35460|protein_coding|CODING|LOC_Os12g35460.1|7|1) FN1686-S.SNP.12:21567611 chr12:021567611 0 W/21567611-21567611 FN1686-S SNP C -> T AC=1;AN=188;BQB=0.139788;DP=3839;DP4=1847,1930,16,20;HOB=5.65867e-05;ICB=0.000113775;MQ=47;MQ0F=0.00208388;MQB=8.35861e-09;MQSB=0.941076;RPB=0.680141;SGB=-85.2098;VDB=0.742419;EFF=INTRON(MODIFIER||||908|LOC_Os12g35460|protein_coding|CODING|LOC_Os12g35460.1|7|1) FN1761-S.SNP.12:21569945 chr12:021569945 0 W/21569945-21569945 FN1761-S SNP G -> A AC=1;AN=188;BQB=0.089948;DP=3842;DP4=1796,2008,7,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000130068;MQSB=0.967702;RPB=0.368281;SGB=-93.6949;VDB=0.368145;EFF=SYNONYMOUS_CODING(LOW|SILENT|ttG/ttA|L164|346|LOC_Os12g35465|protein_coding|CODING|LOC_Os12g35465.1|6|1) FN3522-S.SNP.12:21581094 chr12:021581094 0 W/21581094-21581094 FN3522-S SNP T -> A AC=1;AN=188;BQB=0.112767;DP=2964;DP4=1245,1602,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.02087e-08;MQSB=0.0516374;RPB=0.216216;SGB=39.5276;VDB=0.44694;EFF=INTRON(MODIFIER||||262|LOC_Os12g35490|protein_coding|CODING|LOC_Os12g35490.1|2|1) FN3522-S.SNP.12:21581095 chr12:021581095 0 W/21581095-21581095 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.954513;DP=2966;DP4=1258,1608,6,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.1674e-06;MQSB=0.0246754;RPB=0.369751;SGB=48.979;VDB=0.503225;EFF=INTRON(MODIFIER||||262|LOC_Os12g35490|protein_coding|CODING|LOC_Os12g35490.1|2|1) W453-3-1.SNP.12:21582153 chr12:021582153 0 W/21582153-21582153 W453-3-1 Single Base Substitution G-A INTERGENIC HET SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN3951-S.SNP.12:21588750 chr12:021588750 0 W/21588750-21588750 FN3951-S SNP C -> T AC=1;AN=168;BQB=0.926936;DP=2588;DP4=1151,1346,9,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.54838e-10;MQSB=0.984576;RPB=0.763172;SGB=58.7637;VDB=0.508688;EFF=INTERGENIC(MODIFIER||||||||||1) FN2587-S.SNP.12:21594506 chr12:021594506 0 W/21594506-21594506 FN2587-S SNP T -> A AC=2;AN=198;BQB=0.29586;DP=4383;DP4=2034,2062,25,26;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.19692e-26;MQSB=0.996809;RPB=0.789877;SGB=228.759;VDB=0.725504;EFF=INTERGENIC(MODIFIER||||||||||1) FN767-S.SNP.12:21598119 chr12:021598119 0 W/21598119-21598119 FN767-S Single Base Substitution C-A INTERGENIC HET SNo: 688, Mutant_ID: FN767-S, Generation: M2, Mutations: 49, Genes: 5, Seed availability: Yes. FN2448.SNP.12:21601502 chr12:021601502 0 W/21601502-21601502 FN2448 SNP G -> A AC=1;AN=200;BQB=0.465323;DP=4601;DP4=2234,2104,5,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.01407e-07;MQSB=0.994848;RPB=0.458658;SGB=54.2646;VDB=0.674415;EFF=INTERGENIC(MODIFIER||||||||||1) FN-199.SNP.12:21602849 chr12:021602849 0 W/21602849-21602849 FN-199 Single Base Substitution A-G INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN3934-S.SNP.12:21604348 chr12:021604348 0 W/21604348-21604348 FN3934-S SNP A -> G AC=2;AN=158;BQB=0.455169;DP=2761;DP4=1288,1353,18,25;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=2.39663e-17;MQSB=0.256787;RPB=0.538028;SGB=135.157;VDB=0.600444;EFF=INTERGENIC(MODIFIER||||||||||1) FN1570-S.SNP.12:21611404 chr12:021611404 0 W/21611404-21611404 FN1570-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1309, Mutant_ID: FN1570-S, Generation: M2, Mutations: 55, Genes: 15, Seed availability: Yes. FN1234-S.SNP.12:21612120 chr12:021612120 0 W/21612120-21612120 FN1234-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g35540 expressed protein SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN3424-S.SNP.12:21613480 chr12:021613480 0 W/21613480-21613480 FN3424-S SNP C -> A AC=1;AN=184;BQB=0.779387;DP=2428;DP4=1058,1304,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.61426e-07;MQSB=0.960344;RPB=0.904532;SGB=39.2697;VDB=0.417754;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|ttC/ttA|F572L|582|LOC_Os12g35540|protein_coding|CODING|LOC_Os12g35540.1|6|1) FN3851-S.SNP.12:21616514 chr12:021616514 0 W/21616514-21616514 FN3851-S SNP C -> A AC=1;AN=158;BQB=0.505079;DP=2517;DP4=1067,1368,6,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.60599e-06;MQSB=0.91162;RPB=0.985334;SGB=55.806;VDB=0.644859;EFF=INTRON(MODIFIER||||192|LOC_Os12g35550|protein_coding|CODING|LOC_Os12g35550.1|3|1),INTRON(MODIFIER||||187|LOC_Os12g35550|protein_coding|CODING|LOC_Os12g35550.2|2|1) FN3413-S.SNP.12:21622407 chr12:021622407 0 W/21622407-21622407 FN3413-S SNP C -> T AC=1;AN=184;BQB=0.689512;DP=2565;DP4=1313,1195,7,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.97673e-07;MQSB=0.922168;RPB=0.741754;SGB=44.2207;VDB=0.205275;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S314L|489|LOC_Os12g35560|protein_coding|CODING|LOC_Os12g35560.1|10|1) FN3916-S.SNP.12:21628505 chr12:021628505 0 W/21628505-21628505 FN3916-S SNP C -> T AC=1;AN=158;BQB=0.823233;DP=2361;DP4=1144,1126,10,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=3.96509e-08;MQSB=0.959974;RPB=0.486122;SGB=3.4556;VDB=0.626989;EFF=INTRON(MODIFIER||||408|LOC_Os12g35570|protein_coding|CODING|LOC_Os12g35570.1|2|1),INTRON(MODIFIER||||341|LOC_Os12g35570|protein_coding|CODING|LOC_Os12g35570.2|2|1),INTRON(MODIFIER||||333|LOC_Os12g35570|protein_coding|CODING|LOC_Os12g35570.3|2|1) FN1216-S.SNP.12:21631689 chr12:021631689 0 W/21631689-21631689 FN1216-S Single Base Substitution C-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN824-S.SNP.12:21632667 chr12:021632667 0 W/21632667-21632667 FN824-S Single Base Substitution A-T INTERGENIC HET SNo: 739, Mutant_ID: FN824-S, Generation: M2, Mutations: 65, Genes: 135, Seed availability: Yes. FN1471-S.SNP.12:21635365 chr12:021635365 0 W/21635365-21635365 FN1471-S SNP T -> C AC=2;AN=188;BQB=0.43389;DP=3071;DP4=1784,1230,22,17;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.84405e-20;MQSB=0.993821;RPB=0.974324;SGB=41.034;VDB=0.912747;EFF=INTERGENIC(MODIFIER||||||||||1) FN1471-S.SNP.12:21635368 chr12:021635368 0 W/21635368-21635368 FN1471-S SNP A -> T AC=2;AN=188;BQB=0.226373;DP=3101;DP4=1817,1226,27,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.94332e-22;MQSB=0.999935;RPB=0.287311;SGB=-140.488;VDB=0.907114;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.12:21640789 chr12:021640789 0 W/21640789-21640789 FN3987-S SNP C -> A AC=2;AN=168;BQB=0.986525;DP=2490;DP4=1099,1276,18,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.99277e-16;MQSB=0.388794;RPB=0.176789;SGB=131.927;VDB=0.617176;EFF=UTR_3_PRIME(MODIFIER||8||108|LOC_Os12g35590|protein_coding|CODING|LOC_Os12g35590.1|1|1) W426-1-1.SNP.12:21647421 chr12:021647421 0 W/21647421-21647421 W426-1-1 Single Base Substitution C-T INTERGENIC HET SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN438-S.SNP.12:21660384 chr12:021660384 0 W/21660384-21660384 FN438-S Single Base Substitution A-T INTERGENIC HOMO SNo: 437, Mutant_ID: FN438-S, Generation: M2, Mutations: 78, Genes: 31, Seed availability: Yes. FN3798-S.SNP.12:21661386 chr12:021661386 0 W/21661386-21661386 FN3798-S SNP A -> G AC=1;AN=190;BQB=0.974066;DP=2958;DP4=1210,1646,7,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.02312e-05;MQSB=0.830177;RPB=0.952977;SGB=35.4339;VDB=0.822117;EFF=INTRON(MODIFIER||||1123|LOC_Os12g35630|protein_coding|CODING|LOC_Os12g35630.1|1|1),INTRON(MODIFIER||||687|LOC_Os12g35630|protein_coding|CODING|LOC_Os12g35630.3|1|1) FN1504-S.SNP.12:21665897 chr12:021665897 0 W/21665897-21665897 FN1504-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1260, Mutant_ID: FN1504-S, Generation: M2, Mutations: 93, Genes: 12, Seed availability: Yes. FN3786-S.SNP.12:21667772 chr12:021667772 0 W/21667772-21667772 FN3786-S SNP G -> C AC=2;AN=190;BQB=0.495514;DP=2661;DP4=1411,1134,16,7;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.37958e-10;MQSB=0.994471;RPB=0.237328;SGB=99.1879;VDB=0.139154;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCa/cGa|P108R|300|LOC_Os12g35640|protein_coding|CODING|LOC_Os12g35640.1|2|1) FN2165-S.SNP.12:21678945 chr12:021678945 0 W/21678945-21678945 FN2165-S SNP G -> A AC=2;AN=168;BQB=0.419157;DP=2011;DP4=1761,202,23,3;HOB=0.0235261;ICB=0.494119;MQ=41;MQ0F=0.00546992;MQB=0.0751296;MQSB=0.0760684;RPB=0.769885;SGB=-11.926;VDB=0.66435;EFF=INTERGENIC(MODIFIER||||||||||1) FN1049-S.SNP.12:21685899 chr12:021685899 0 W/21685899-21685899 FN1049-S Single Base Substitution A-C INTERGENIC HET SNo: 943, Mutant_ID: FN1049-S, Generation: M2, Mutations: 59, Genes: 38, Seed availability: Yes. FN2260-S.SNP.12:21690835 chr12:021690835 0 W/21690835-21690835 FN2260-S SNP T -> A AC=1;AN=190;BQB=0.229891;DP=5034;DP4=2106,2434,18,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.81002e-12;MQSB=0.915825;RPB=0.974577;SGB=126.511;VDB=0.237597;EFF=INTERGENIC(MODIFIER||||||||||1) FN1441-S.SNP.12:21694389 chr12:021694389 0 W/21694389-21694389 FN1441-S Single Base Substitution G-A INTRON HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1640-S.SNP.12:21711914 chr12:021711914 0 W/21711914-21711914 FN1640-S Single Base Substitution G-A INTRON HET SNo: 1345, Mutant_ID: FN1640-S, Generation: M2, Mutations: 95, Genes: 86, Seed availability: Yes. FN3994-S.SNP.12:21713418 chr12:021713418 0 W/21713418-21713418 FN3994-S SNP C -> T AC=1;AN=168;BQB=0.705105;DP=2657;DP4=1069,1456,7,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.25951e-13;MQSB=0.208644;RPB=0.987738;SGB=65.6253;VDB=0.574209;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Aac|D148N|544|LOC_Os12g35710|protein_coding|CODING|LOC_Os12g35710.1|1|1) FN2242-S.SNP.12:21713460 chr12:021713460 0 W/21713460-21713460 FN2242-S SNP C -> A AC=1;AN=190;BQB=0.307264;DP=3689;DP4=1594,1723,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=1.96981e-06;MQSB=0.528193;RPB=0.970682;SGB=58.2031;VDB=0.939074;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gac/Tac|D134Y|544|LOC_Os12g35710|protein_coding|CODING|LOC_Os12g35710.1|1|1) FN539-S.SNP.12:21716327 chr12:021716327 0 W/21716327-21716327 FN539-S Single Base Substitution C-T INTERGENIC HET SNo: 535, Mutant_ID: FN539-S, Generation: M2, Mutations: 60, Genes: 21, Seed availability: Yes. FN888-S.SNP.12:21716418 chr12:021716418 0 W/21716418-21716418 FN888-S Single Base Substitution G-A INTERGENIC HOMO SNo: 794, Mutant_ID: FN888-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN3533-S.SNP.12:21717922 chr12:021717922 0 W/21717922-21717922 FN3533-S SNP C -> T AC=2;AN=188;BQB=0.953515;DP=2456;DP4=1249,1139,8,11;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.28693e-12;MQSB=0.984612;RPB=0.997048;SGB=57.244;VDB=0.488788;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.12:21720080 chr12:021720080 0 W/21720080-21720080 FN-287 Single Base Substitution C-T INTERGENIC HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN477-S.SNP.12:21720614 chr12:021720614 0 W/21720614-21720614 FN477-S Single Base Substitution C-A INTERGENIC HOMO SNo: 476, Mutant_ID: FN477-S, Generation: M2, Mutations: 63, Genes: 34, Seed availability: Yes. FN3722-S.SNP.12:21724691 chr12:021724691 0 W/21724691-21724691 FN3722-S SNP T -> C AC=2;AN=190;BQB=0.994127;DP=2590;DP4=1161,1311,19,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.23573e-19;MQSB=0.831658;RPB=0.691391;SGB=107.178;VDB=0.424792;EFF=INTERGENIC(MODIFIER||||||||||1) FN3810-S.SNP.12:21726926 chr12:021726926 0 W/21726926-21726926 FN3810-S SNP G -> T AC=1;AN=190;BQB=0.77764;DP=1893;DP4=957,787,6,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00110196;MQSB=0.405393;RPB=0.845882;SGB=30.8803;VDB=0.868994;EFF=INTERGENIC(MODIFIER||||||||||1) FN-114.SNP.12:21728924 chr12:021728924 0 W/21728924-21728924 FN-114 Single Base Substitution G-C INTERGENIC HET SNo: 114, Mutant_ID: FN-114, Generation: M2, Mutations: 66, Genes: 11, Seed availability: Yes. FN2461.SNP.12:21738862 chr12:021738862 0 W/21738862-21738862 FN2461 SNP C -> T AC=1;AN=200;BQB=0.976536;DP=5312;DP4=2173,2803,9,5;HOB=5e-05;ICB=0.0001005;MQ=40;MQ0F=0.0466867;MQB=0.226106;MQSB=7.87817e-08;RPB=0.99906;SGB=21.6694;VDB=0.456742;EFF=INTRON(MODIFIER||||768|LOC_Os12g35720|protein_coding|CODING|LOC_Os12g35720.1|5|1) FN-162.SNP.12:21739452 chr12:021739452 0 W/21739452-21739452 FN-162 Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g35720 transposon protein, putative, CACTA, En/Spm sub-class, expressed SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN1718-S.SNP.12:21740254 chr12:021740254 0 W/21740254-21740254 FN1718-S SNP G -> A AC=1;AN=188;BQB=0.260731;DP=2118;DP4=1243,848,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=42;MQ0F=0.00519358;MQB=0.0856551;MQSB=0.00227348;RPB=0.939386;SGB=-17.7162;VDB=0.575864;EFF=INTRON(MODIFIER||||768|LOC_Os12g35720|protein_coding|CODING|LOC_Os12g35720.1|2|1) FN3595-S.SNP.12:21741637 chr12:021741637 0 W/21741637-21741637 FN3595-S SNP G -> A AC=1;AN=190;BQB=0.827219;DP=2982;DP4=1459,1438,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0.0073776;MQB=0.000922204;MQSB=0.0274419;RPB=0.679678;SGB=80.9724;VDB=0.358005;EFF=INTERGENIC(MODIFIER||||||||||1) FN-218.SNP.12:21752542 chr12:021752542 0 W/21752542-21752542 FN-218 Single Base Substitution C-G INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-218.SNP.12:21752545 chr12:021752545 0 W/21752545-21752545 FN-218 Single Base Substitution A-G INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN-218.SNP.12:21752549 chr12:021752549 0 W/21752549-21752549 FN-218 Single Base Substitution G-A INTERGENIC HOMO SNo: 217, Mutant_ID: FN-218, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN2550-S.SNP.12:21758716 chr12:021758716 0 W/21758716-21758716 FN2550-S SNP G -> T AC=1;AN=198;BQB=0.0973757;DP=4295;DP4=2034,1979,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000232829;MQB=1.60649e-06;MQSB=0.386608;RPB=0.640997;SGB=13.7736;VDB=0.948925;EFF=INTERGENIC(MODIFIER||||||||||1) FN3615-S.SNP.12:21761704 chr12:021761704 0 W/21761704-21761704 FN3615-S SNP A -> T AC=1;AN=190;BQB=0.929275;DP=2616;DP4=1063,1356,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.61927e-07;MQSB=0.976023;RPB=0.979391;SGB=15.9981;VDB=0.782154;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcT/gcA|A1075|1136|LOC_Os12g35740|protein_coding|CODING|LOC_Os12g35740.1|9|1) FN1708-S.SNP.12:21762713 chr12:021762713 0 W/21762713-21762713 FN1708-S SNP G -> A AC=1;AN=188;BQB=0.000610177;DP=3638;DP4=2089,1519,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=4.36588e-05;MQSB=0.00298829;RPB=0.989621;SGB=8.62479;VDB=0.264954;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T880I|1136|LOC_Os12g35740|protein_coding|CODING|LOC_Os12g35740.1|7|1) FN3514-S.SNP.12:21764826 chr12:021764826 0 W/21764826-21764826 FN3514-S SNP T -> C AC=1;AN=188;BQB=0.850682;DP=2730;DP4=1261,1275,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=45;MQ0F=0.0142857;MQB=7.61344e-05;MQSB=0.674182;RPB=0.484895;SGB=31.1628;VDB=0.183541;EFF=INTRON(MODIFIER||||1136|LOC_Os12g35740|protein_coding|CODING|LOC_Os12g35740.1|3|1) FN-77.SNP.12:21764955 chr12:021764955 0 W/21764955-21764955 FN-77 Single Base Substitution T-G INTRON HET SNo: 77, Mutant_ID: FN-77, Generation: M2, Mutations: 35, Genes: 88, Seed availability: Yes. FN-48.SNP.12:21767168 chr12:021767168 0 W/21767168-21767168 FN-48 Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 48, Mutant_ID: FN-48, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. W470-2-1.SNP.12:21774717 chr12:021774717 0 W/21774717-21774717 W470-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN2137-S.SNP.12:21775275 chr12:021775275 0 W/21775275-21775275 FN2137-S SNP C -> T AC=1;AN=168;BQB=0.508439;DP=2945;DP4=944,1956,7,19;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.30404e-10;MQSB=0.463446;RPB=0.922072;SGB=-42.3508;VDB=0.10554;EFF=INTERGENIC(MODIFIER||||||||||1) FN3311-S.SNP.12:21775916 chr12:021775916 0 W/21775916-21775916 FN3311-S SNP C -> A AC=2;AN=184;BQB=0.950974;DP=3159;DP4=1425,1563,21,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.35582e-20;MQSB=0.998337;RPB=0.872201;SGB=88.8416;VDB=0.87924;EFF=INTERGENIC(MODIFIER||||||||||1) FN2433.SNP.12:21777855 chr12:021777855 0 W/21777855-21777855 FN2433 SNP G -> C AC=1;AN=198;BQB=0.749591;DP=4647;DP4=2440,1964,13,14;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0.000430385;MQB=8.82886e-11;MQSB=0.930505;RPB=0.973582;SGB=87.1368;VDB=0.418169;EFF=INTERGENIC(MODIFIER||||||||||1) FN-195.SNP.12:21778501 chr12:021778501 0 W/21778501-21778501 FN-195 Single Base Substitution T-A INTERGENIC HET SNo: 195, Mutant_ID: FN-195, Generation: M2, Mutations: 51, Genes: 19, Seed availability: Yes. FN3728-S.SNP.12:21779371 chr12:021779371 0 W/21779371-21779371 FN3728-S SNP C -> T AC=2;AN=190;BQB=0.799407;DP=3181;DP4=1190,1844,10,18;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.70114e-13;MQSB=0.631142;RPB=0.705257;SGB=121.957;VDB=0.929411;EFF=INTERGENIC(MODIFIER||||||||||1) FN-204.SNP.12:21786858 chr12:021786858 0 W/21786858-21786858 FN-204 Single Base Substitution T-G INTERGENIC HET SNo: 204, Mutant_ID: FN-204, Generation: M2, Mutations: 50, Genes: 98, Seed availability: Yes. FN-150.SNP.12:21791073 chr12:021791073 0 W/21791073-21791073 FN-150 Single Base Substitution A-T INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN-150.SNP.12:21791074 chr12:021791074 0 W/21791074-21791074 FN-150 Single Base Substitution G-T INTERGENIC HOMO SNo: 150, Mutant_ID: FN-150, Generation: M2, Mutations: 44, Genes: 6, Seed availability: Yes. FN3535-S.SNP.12:21803249 chr12:021803249 0 W/21803249-21803249 FN3535-S SNP A -> G AC=1;AN=188;BQB=0.590836;DP=2849;DP4=1355,1415,6,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0024242;MQSB=0.999979;RPB=0.780466;SGB=18.2682;VDB=0.668412;EFF=INTERGENIC(MODIFIER||||||||||1) FN4111-S.SNP.12:21804016 chr12:021804016 0 W/21804016-21804016 FN4111-S SNP G -> A AC=1;AN=182;BQB=0.875192;DP=2655;DP4=1281,1302,9,9;HOB=6.03792e-05;ICB=0.000121422;MQ=37;MQ0F=0.0741996;MQB=0.377828;MQSB=0;RPB=0.834493;SGB=75.6874;VDB=0.438843;EFF=INTERGENIC(MODIFIER||||||||||1) FN2385.SNP.12:21811792 chr12:021811792 0 W/21811792-21811792 FN2385 SNP A -> T AC=2;AN=192;BQB=0.872676;DP=4921;DP4=2430,2201,26,18;HOB=0.0206163;ICB=0.494846;MQ=16;MQ0F=0.213778;MQB=0.292851;MQSB=0;RPB=0.536869;SGB=98.1513;VDB=0.0133366;EFF=INTERGENIC(MODIFIER||||||||||1) FN2387.SNP.12:21820215 chr12:021820215 0 W/21820215-21820215 FN2387 SNP C -> T AC=1;AN=192;BQB=0.858101;DP=5083;DP4=2305,2411,19,19;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.32778e-19;MQSB=0.971892;RPB=0.567165;SGB=82.7652;VDB=0.54249;EFF=INTERGENIC(MODIFIER||||||||||1) FN3865-S.SNP.12:21828338 chr12:021828338 0 W/21828338-21828338 FN3865-S SNP G -> A AC=2;AN=158;BQB=0.999708;DP=2800;DP4=1600,1087,11,15;HOB=0.024996;ICB=0.493752;MQ=31;MQ0F=0.118214;MQB=0.0841521;MQSB=0;RPB=0.925743;SGB=108.239;VDB=0.571167;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G678|983|LOC_Os12g35810|protein_coding|CODING|LOC_Os12g35810.1|3|1) FN465-S.SNP.12:21835249 chr12:021835249 0 W/21835249-21835249 FN465-S Single Base Substitution C-T INTERGENIC HET SNo: 464, Mutant_ID: FN465-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1665-S.SNP.12:21838571 chr12:021838571 0 W/21838571-21838571 FN1665-S Single Base Substitution T-A INTERGENIC HET SNo: 1363, Mutant_ID: FN1665-S, Generation: M2, Mutations: 104, Genes: 147, Seed availability: Yes. FN1142-S.SNP.12:21838761 chr12:021838761 0 W/21838761-21838761 FN1142-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g35840 transposon protein, putative, CACTA, En/Spm sub-class SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN3727-S.SNP.12:21838920 chr12:021838920 0 W/21838920-21838920 FN3727-S SNP T -> A AC=2;AN=190;BQB=0.950966;DP=2730;DP4=1449,1195,13,10;HOB=0.020831;ICB=0.494793;MQ=39;MQ0F=0.0315018;MQB=0.838897;MQSB=0.382835;RPB=0.970812;SGB=99.1879;VDB=0.470412;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cTg|Q934L|989|LOC_Os12g35840|protein_coding|CODING|LOC_Os12g35840.1|4|1) FN3769-S.SNP.12:21841058 chr12:021841058 0 W/21841058-21841058 FN3769-S SNP T -> C AC=1;AN=190;BQB=0.939009;DP=2744;DP4=1390,1254,2,5;HOB=5.54017e-05;ICB=0.000111386;MQ=38;MQ0F=0.0754373;MQB=0.863549;MQSB=5.02949e-12;RPB=0.771849;SGB=26.3271;VDB=0.209095;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D284G|989|LOC_Os12g35840|protein_coding|CODING|LOC_Os12g35840.1|1|1) FN2666-S.SNP.12:21841571 chr12:021841571 0 W/21841571-21841571 FN2666-S SNP C -> T AC=1;AN=200;BQB=0.782201;DP=4791;DP4=2430,2059,75,18;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0354832;MQB=2.0279e-29;MQSB=2.63837e-19;RPB=2.06543e-12;SGB=-2065.29;VDB=0.0054787;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R113H|989|LOC_Os12g35840|protein_coding|CODING|LOC_Os12g35840.1|1|1) FN2788-S.SNP.12:21841571 chr12:021841571 0 W/21841571-21841571 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.974424;DP=4122;DP4=2160,1735,61,12;HOB=5.10152e-05;ICB=0.000102546;MQ=41;MQ0F=0.0400291;MQB=1.48716e-22;MQSB=9.96867e-25;RPB=2.24363e-11;SGB=-1138.66;VDB=0.00160957;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R113H|989|LOC_Os12g35840|protein_coding|CODING|LOC_Os12g35840.1|1|1) FN3921-S.SNP.12:21841571 chr12:021841571 0 W/21841571-21841571 FN3921-S SNP C -> T AC=1;AN=158;BQB=0.922818;DP=2764;DP4=1513,1118,52,10;HOB=8.01154e-05;ICB=0.000161245;MQ=37;MQ0F=0.0705499;MQB=4.13788e-22;MQSB=1.21228e-18;RPB=6.54303e-11;SGB=-1133.29;VDB=4.65612e-11;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R113H|989|LOC_Os12g35840|protein_coding|CODING|LOC_Os12g35840.1|1|1) FN706-S.SNP.12:21841571 chr12:021841571 0 W/21841571-21841571 FN706-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g35840 transposon protein, putative, CACTA, En/Spm sub-class SNo: 635, Mutant_ID: FN706-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN3715-S.SNP.12:21842070 chr12:021842070 0 W/21842070-21842070 FN3715-S SNP T -> C AC=1;AN=190;BQB=0.655608;DP=3493;DP4=1211,2179,5,11;HOB=5.54017e-05;ICB=0.000111386;MQ=34;MQ0F=0.0509591;MQB=0.999169;MQSB=0.115454;RPB=0.889891;SGB=26.2136;VDB=0.674722;EFF=INTERGENIC(MODIFIER||||||||||1) FN-232.SNP.12:21842663 chr12:021842663 0 W/21842663-21842663 FN-232 Single Base Substitution G-A INTERGENIC HET SNo: 231, Mutant_ID: FN-232, Generation: M2, Mutations: 108, Genes: 16, Seed availability: Yes. FN540-S.SNP.12:21843701 chr12:021843701 0 W/21843701-21843701 FN540-S Single Base Substitution T-A INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN-199.SNP.12:21845611 chr12:021845611 0 W/21845611-21845611 FN-199 Single Base Substitution A-G INTERGENIC HOMO SNo: 199, Mutant_ID: FN-199, Generation: M2, Mutations: 57, Genes: 13, Seed availability: Yes. FN-308.SNP.12:21846817 chr12:021846817 0 W/21846817-21846817 FN-308 Single Base Substitution A-G INTERGENIC HET SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN2377.SNP.12:21846961 chr12:021846961 0 W/21846961-21846961 FN2377 SNP T -> C AC=1;AN=192;BQB=0.93605;DP=4861;DP4=2345,2316,10,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.12165e-14;MQSB=0.997383;RPB=0.762133;SGB=82.5522;VDB=0.519862;EFF=INTERGENIC(MODIFIER||||||||||1) FN1540-S.SNP.12:21851126 chr12:021851126 0 W/21851126-21851126 FN1540-S Single Base Substitution G-A INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN4187-S.SNP.12:21851360 chr12:021851360 0 W/21851360-21851360 FN4187-S SNP G -> A AC=1;AN=170;BQB=0.999288;DP=2564;DP4=1101,1394,4,10;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000390016;MQB=5.0313e-09;MQSB=0.992523;RPB=0.954973;SGB=56.7575;VDB=0.971988;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R25H|75|LOC_Os12g35860|protein_coding|CODING|LOC_Os12g35860.1|1|1) FN-188.SNP.12:21853337 chr12:021853337 0 W/21853337-21853337 FN-188 Single Base Substitution C-A INTERGENIC HET SNo: 188, Mutant_ID: FN-188, Generation: M2, Mutations: 56, Genes: 19, Seed availability: Yes. FN2446.SNP.12:21855336 chr12:021855336 0 W/21855336-21855336 FN2446 SNP C -> G AC=1;AN=200;BQB=0.380409;DP=4486;DP4=2239,1972,10,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.88471e-09;MQSB=0.980931;RPB=0.140472;SGB=72.7161;VDB=0.450547;EFF=INTERGENIC(MODIFIER||||||||||1) FN798-S.SNP.12:21863073 chr12:021863073 0 W/21863073-21863073 FN798-S Single Base Substitution C-G INTRON HOMO SNo: 718, Mutant_ID: FN798-S, Generation: M2, Mutations: 56, Genes: 31, Seed availability: Yes. FN2149-S.SNP.12:21863103 chr12:021863103 0 W/21863103-21863103 FN2149-S SNP C -> T AC=1;AN=168;BQB=0.850927;DP=2816;DP4=1414,1347,12,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.42063e-08;MQSB=0.938889;RPB=0.757897;SGB=7.05233;VDB=0.0981639;EFF=INTRON(MODIFIER||||1417|LOC_Os12g35880|protein_coding|CODING|LOC_Os12g35880.1|3|1) FN1532-S.SNP.12:21863330 chr12:021863330 0 W/21863330-21863330 FN1532-S Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g35880 retrotransposon protein, putative, unclassified, expressed SNo: 1282, Mutant_ID: FN1532-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3656-S.SNP.12:21864162 chr12:021864162 0 W/21864162-21864162 FN3656-S SNP C -> T AC=2;AN=190;BQB=0.152514;DP=3029;DP4=1375,1545,14,9;HOB=0.020831;ICB=0.494793;MQ=46;MQ0F=0.0155167;MQB=1.07829e-05;MQSB=0.000265782;RPB=0.445896;SGB=71.6393;VDB=0.75508;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCa/aTa|T1179I|1417|LOC_Os12g35880|protein_coding|CODING|LOC_Os12g35880.1|4|1) FN3375-S.SNP.12:21864660 chr12:021864660 0 W/21864660-21864660 FN3375-S SNP C -> T AC=1;AN=184;BQB=0.888176;DP=2607;DP4=1221,1269,7,9;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.00306866;MQB=1.66094e-06;MQSB=0.840617;RPB=0.716956;SGB=46.3132;VDB=0.571893;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A1345V|1417|LOC_Os12g35880|protein_coding|CODING|LOC_Os12g35880.1|4|1) FN2118-S.SNP.12:21864857 chr12:021864857 0 W/21864857-21864857 FN2118-S SNP A -> T AC=1;AN=168;BQB=0.633192;DP=4267;DP4=2114,2104,15,21;HOB=7.08617e-05;ICB=0.000142567;MQ=47;MQ0F=0;MQB=5.17672e-15;MQSB=0.020552;RPB=0.0950004;SGB=32.807;VDB=0.245868;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Att/Ttt|I1411F|1417|LOC_Os12g35880|protein_coding|CODING|LOC_Os12g35880.1|4|1) FN2572-S.SNP.12:21866797 chr12:021866797 0 W/21866797-21866797 FN2572-S Single Base Substitution G-C INTERGENIC HET SNo: 1365, Mutant_ID: FN2572-S, Generation: M2, Mutations: 96, Genes: 49, Seed availability: Yes. FN685-S.SNP.12:21869471 chr12:021869471 0 W/21869471-21869471 FN685-S Single Base Substitution C-T INTERGENIC HET SNo: 618, Mutant_ID: FN685-S, Generation: M2, Mutations: 44, Genes: 13, Seed availability: Yes. FN-346.SNP.12:21869721 chr12:021869721 0 W/21869721-21869721 FN-346 Single Base Substitution G-T INTERGENIC HET SNo: 337, Mutant_ID: FN-346, Generation: M2, Mutations: 55, Genes: 21, Seed availability: Yes. FN2377.SNP.12:21870172 chr12:021870172 0 W/21870172-21870172 FN2377 SNP G -> A AC=1;AN=192;BQB=0.468807;DP=4284;DP4=2201,1755,14,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000233427;MQB=1.51793e-11;MQSB=0.498867;RPB=0.994603;SGB=86.1165;VDB=0.65665;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A134|420|LOC_Os12g35890|protein_coding|CODING|LOC_Os12g35890.1|1|1) FN2765-S.SNP.12:21871123 chr12:021871123 0 W/21871123-21871123 FN2765-S SNP G -> T AC=1;AN=198;BQB=0.260945;DP=4398;DP4=1827,2348,9,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.4252e-08;MQSB=0.847365;RPB=0.850211;SGB=50.9344;VDB=0.245357;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A325S|420|LOC_Os12g35890|protein_coding|CODING|LOC_Os12g35890.1|2|1) FN708-S.SNP.12:21877955 chr12:021877955 0 W/21877955-21877955 FN708-S Single Base Substitution T-C INTERGENIC HET SNo: 637, Mutant_ID: FN708-S, Generation: M2, Mutations: 60, Genes: 9, Seed availability: Yes. FN4116-S.SNP.12:21886140 chr12:021886140 0 W/21886140-21886140 FN4116-S SNP G -> A AC=2;AN=182;BQB=0.473231;DP=2493;DP4=1173,1224,20,12;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.1425e-14;MQSB=0.958357;RPB=0.99999;SGB=102.334;VDB=0.761826;EFF=INTERGENIC(MODIFIER||||||||||1) FN769-S.SNP.12:21887347 chr12:021887347 0 W/21887347-21887347 FN769-S Single Base Substitution C-G INTERGENIC HET SNo: 690, Mutant_ID: FN769-S, Generation: M2, Mutations: 72, Genes: 33, Seed availability: Yes. FN506-S.SNP.12:21909425 chr12:021909425 0 W/21909425-21909425 FN506-S Single Base Substitution A-T INTERGENIC HET SNo: 504, Mutant_ID: FN506-S, Generation: M2, Mutations: 56, Genes: 147, Seed availability: Yes. FN2629-S.SNP.12:21911129 chr12:021911129 0 W/21911129-21911129 FN2629-S SNP G -> T AC=1;AN=200;BQB=0.531388;DP=4850;DP4=2174,2360,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27886e-07;MQSB=0.928528;RPB=0.804265;SGB=-35.3156;VDB=0.830974;EFF=INTERGENIC(MODIFIER||||||||||1) FN4172-S.SNP.12:21911639 chr12:021911639 0 W/21911639-21911639 FN4172-S SNP C -> A AC=1;AN=170;BQB=0.985417;DP=2461;DP4=1120,1223,7,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=2.74581e-06;MQSB=0.998646;RPB=0.828514;SGB=27.9928;VDB=0.361713;EFF=INTERGENIC(MODIFIER||||||||||1) FN1541-S.SNP.12:21916084 chr12:021916084 0 W/21916084-21916084 FN1541-S Single Base Substitution C-A INTERGENIC HET SNo: 1290, Mutant_ID: FN1541-S, Generation: M2, Mutations: 102, Genes: 24, Seed availability: Yes. FN2455.SNP.12:21921616 chr12:021921616 0 W/21921616-21921616 FN2455 SNP C -> A AC=1;AN=200;BQB=0.833071;DP=4354;DP4=1996,2069,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.83458e-08;MQSB=0.656224;RPB=0.747435;SGB=34.6953;VDB=0.165392;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.12:21923729 chr12:021923729 0 W/21923729-21923729 FN4052-S SNP C -> A AC=1;AN=168;BQB=0.121714;DP=2518;DP4=1298,1137,6,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.28736e-06;MQSB=0.957122;RPB=0.780882;SGB=38.1788;VDB=0.78588;EFF=INTERGENIC(MODIFIER||||||||||1) FN889-S.SNP.12:21925443 chr12:021925443 0 W/21925443-21925443 FN889-S Single Base Substitution G-C INTERGENIC HET SNo: 795, Mutant_ID: FN889-S, Generation: M2, Mutations: 60, Genes: 42, Seed availability: Yes. FN1072-S.SNP.12:21935661 chr12:021935661 0 W/21935661-21935661 FN1072-S Single Base Substitution C-T INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN3486-S.SNP.12:21935720 chr12:021935720 0 W/21935720-21935720 FN3486-S SNP G -> A AC=1;AN=184;BQB=0.344708;DP=3061;DP4=1428,1503,15,8;HOB=5.90737e-05;ICB=0.00011879;MQ=38;MQ0F=0.0888598;MQB=0.742998;MQSB=0.0625994;RPB=0.693416;SGB=70.9657;VDB=0.94623;EFF=INTERGENIC(MODIFIER||||||||||1) FN472-S.SNP.12:21940389 chr12:021940389 0 W/21940389-21940389 FN472-S Single Base Substitution A-G INTERGENIC HET SNo: 471, Mutant_ID: FN472-S, Generation: M2, Mutations: 47, Genes: 31, Seed availability: Yes. FN825-S.SNP.12:21942514 chr12:021942514 0 W/21942514-21942514 FN825-S Single Base Substitution C-T INTERGENIC HET SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1525-S.SNP.12:21942756 chr12:021942756 0 W/21942756-21942756 FN1525-S Single Base Substitution C-A INTERGENIC HET SNo: 1276, Mutant_ID: FN1525-S, Generation: M2, Mutations: 85, Genes: 12, Seed availability: Yes. FN1097-S.SNP.12:21943035 chr12:021943035 0 W/21943035-21943035 FN1097-S Single Base Substitution C-A INTERGENIC HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN3743-S.SNP.12:21944672 chr12:021944672 0 W/21944672-21944672 FN3743-S SNP G -> A AC=2;AN=190;BQB=0.999628;DP=3348;DP4=1797,1428,7,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.41708e-18;MQSB=0.797355;RPB=0.60964;SGB=121.957;VDB=0.111796;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.12:21944673 chr12:021944673 0 W/21944673-21944673 FN3743-S SNP A -> T AC=2;AN=190;BQB=0.958302;DP=3340;DP4=1799,1427,8,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.62553e-19;MQSB=0.797127;RPB=0.812996;SGB=92.9626;VDB=0.176088;EFF=INTERGENIC(MODIFIER||||||||||1) FN1412-S.SNP.12:21947235 chr12:021947235 0 W/21947235-21947235 FN1412-S Single Base Substitution T-G INTERGENIC HOMO SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2449.SNP.12:21948611 chr12:021948611 0 W/21948611-21948611 FN2449 SNP C -> T AC=2;AN=200;BQB=0.39478;DP=3797;DP4=1732,1738,16,18;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=2.92964e-09;MQSB=0.0166942;RPB=0.536909;SGB=73.7728;VDB=0.891889;EFF=INTERGENIC(MODIFIER||||||||||1) FN2210-S.SNP.12:21949655 chr12:021949655 0 W/21949655-21949655 FN2210-S SNP T -> G AC=1;AN=190;BQB=0.502253;DP=4521;DP4=1961,1960,10,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00022119;MQB=1.29607e-05;MQSB=0.974176;RPB=0.81835;SGB=-13.222;VDB=0.0339694;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.12:21950911 chr12:021950911 0 W/21950911-21950911 FN2452 SNP G -> T AC=1;AN=200;BQB=0.0282802;DP=3968;DP4=1854,1859,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.51684e-08;MQSB=0.192698;RPB=0.623102;SGB=63.4749;VDB=0.134913;EFF=INTERGENIC(MODIFIER||||||||||1) FN2452.SNP.12:21950912 chr12:021950912 0 W/21950912-21950912 FN2452 SNP G -> T AC=1;AN=200;BQB=0.0596482;DP=3952;DP4=1845,1846,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99403e-07;MQSB=0.3029;RPB=0.998852;SGB=40.2696;VDB=0.0496745;EFF=INTERGENIC(MODIFIER||||||||||1) FN3710-S.SNP.12:21952014 chr12:021952014 0 W/21952014-21952014 FN3710-S SNP C -> T AC=1;AN=190;BQB=0.9751;DP=2246;DP4=1224,903,5,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00119649;MQSB=0.868939;RPB=0.999635;SGB=26.3271;VDB=0.200896;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.12:21961534 chr12:021961534 0 W/21961534-21961534 FN2419 SNP G -> C AC=1;AN=200;BQB=0.505288;DP=5143;DP4=2266,2583,17,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000194439;MQB=3.54345e-18;MQSB=0.987268;RPB=0.0742911;SGB=71.1676;VDB=0.405024;EFF=INTERGENIC(MODIFIER||||||||||1) FN1031-S.SNP.12:21963112 chr12:021963112 0 W/21963112-21963112 FN1031-S Single Base Substitution C-T INTERGENIC HET SNo: 927, Mutant_ID: FN1031-S, Generation: M2, Mutations: 89, Genes: 22, Seed availability: Yes. FN4089-S.SNP.12:21963781 chr12:021963781 0 W/21963781-21963781 FN4089-S SNP A -> T AC=1;AN=182;BQB=0.812313;DP=2943;DP4=1352,1538,5,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=9.83124e-09;MQSB=0.347352;RPB=0.889457;SGB=25.655;VDB=0.84216;EFF=INTERGENIC(MODIFIER||||||||||1) FN-394.SNP.12:21982837 chr12:021982837 0 W/21982837-21982837 FN-394 Single Base Substitution G-C INTERGENIC HOMO SNo: 380, Mutant_ID: FN-394, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN2327.SNP.12:21990357 chr12:021990357 0 W/21990357-21990357 FN2327 SNP C -> A AC=2;AN=192;BQB=0.437835;DP=4567;DP4=2246,2040,24,9;HOB=0.0206163;ICB=0.494846;MQ=36;MQ0F=0.0306547;MQB=0.809142;MQSB=1.63556e-06;RPB=0.896594;SGB=32.3844;VDB=0.097607;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cAt|P138H|617|LOC_Os12g35970|protein_coding|CODING|LOC_Os12g35970.1|3|1) FN3857-S.SNP.12:21997777 chr12:021997777 0 W/21997777-21997777 FN3857-S SNP T -> C AC=1;AN=158;BQB=0.938634;DP=2101;DP4=1002,1024,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=9.13593e-07;MQSB=0.992411;RPB=0.788485;SGB=38.3284;VDB=0.0478483;EFF=INTERGENIC(MODIFIER||||||||||1) FN3455-S.SNP.12:21999773 chr12:021999773 0 W/21999773-21999773 FN3455-S SNP G -> A AC=1;AN=184;BQB=0.96808;DP=2792;DP4=1317,1403,11,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17187e-10;MQSB=0.501388;RPB=0.999978;SGB=56.8786;VDB=0.952502;EFF=INTERGENIC(MODIFIER||||||||||1) FN3650-S.SNP.12:22007658 chr12:022007658 0 W/22007658-22007658 FN3650-S SNP C -> T AC=1;AN=190;BQB=0.980132;DP=2739;DP4=1378,1227,9,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.64242e-11;MQSB=0.770729;RPB=0.942246;SGB=53.8699;VDB=0.663613;EFF=INTERGENIC(MODIFIER||||||||||1) FN1529-S.SNP.12:22013071 chr12:022013071 0 W/22013071-22013071 FN1529-S Single Base Substitution A-C INTERGENIC HET SNo: 1280, Mutant_ID: FN1529-S, Generation: M2, Mutations: 109, Genes: 21, Seed availability: Yes. FN2445.SNP.12:22013071 chr12:022013071 0 W/22013071-22013071 FN2445 SNP A -> C AC=1;AN=200;BQB=0.161729;DP=5074;DP4=2634,2173,9,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.5327e-07;MQSB=0.906514;RPB=0.603089;SGB=6.27959;VDB=0.18068;EFF=INTERGENIC(MODIFIER||||||||||1) FN3568-S.SNP.12:22013071 chr12:022013071 0 W/22013071-22013071 FN3568-S SNP A -> C AC=2;AN=188;BQB=0.633504;DP=2631;DP4=1359,1193,14,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.48012e-10;MQSB=0.98228;RPB=0.629317;SGB=67.8739;VDB=0.803641;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.12:22013134 chr12:022013134 0 W/22013134-22013134 FN1760-S SNP A -> T AC=1;AN=188;BQB=0.0964443;DP=3913;DP4=1962,1896,13,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.30656e-09;MQSB=0.998705;RPB=0.999031;SGB=-69.186;VDB=0.470022;EFF=INTERGENIC(MODIFIER||||||||||1) FN1760-S.SNP.12:22013135 chr12:022013135 0 W/22013135-22013135 FN1760-S SNP C -> T AC=1;AN=188;BQB=0.0859155;DP=3934;DP4=1975,1899,14,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.84665e-08;MQSB=0.996197;RPB=0.990551;SGB=-101.181;VDB=0.859949;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.12:22017723 chr12:022017723 0 W/22017723-22017723 FN773-S Single Base Substitution T-C INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN629-S.SNP.12:22019280 chr12:022019280 0 W/22019280-22019280 FN629-S Single Base Substitution T-A INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN629-S.SNP.12:22019281 chr12:022019281 0 W/22019281-22019281 FN629-S Single Base Substitution A-T INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN629-S.SNP.12:22019286 chr12:022019286 0 W/22019286-22019286 FN629-S Single Base Substitution A-T INTERGENIC HET SNo: 594, Mutant_ID: FN629-S, Generation: M2, Mutations: 50, Genes: 16, Seed availability: Yes. FN2411.SNP.12:22022165 chr12:022022165 0 W/22022165-22022165 FN2411 SNP G -> C AC=1;AN=200;BQB=0.974609;DP=3311;DP4=1230,1722,6,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=6.62109e-05;MQSB=0.000146457;RPB=0.33361;SGB=19.0642;VDB=0.635306;EFF=INTERGENIC(MODIFIER||||||||||1) FN3448-S.SNP.12:22024770 chr12:022024770 0 W/22024770-22024770 FN3448-S SNP A -> C AC=1;AN=184;BQB=0.887814;DP=2500;DP4=1249,1159,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.74428e-07;MQSB=0.957133;RPB=0.991667;SGB=28.7043;VDB=0.037126;EFF=INTERGENIC(MODIFIER||||||||||1) FN3913-S.SNP.12:22028468 chr12:022028468 0 W/22028468-22028468 FN3913-S SNP T -> A AC=1;AN=158;BQB=0.981104;DP=2199;DP4=1195,918,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.21356e-10;MQSB=0.767753;RPB=0.982936;SGB=44.1818;VDB=0.542388;EFF=INTERGENIC(MODIFIER||||||||||1) FN4052-S.SNP.12:22041534 chr12:022041534 0 W/22041534-22041534 FN4052-S SNP T -> C AC=1;AN=168;BQB=0.742966;DP=2690;DP4=1212,1357,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.28123e-10;MQSB=0.975301;RPB=0.634122;SGB=58.7637;VDB=0.733112;EFF=INTERGENIC(MODIFIER||||||||||1) FN2480.SNP.12:22041964 chr12:022041964 0 W/22041964-22041964 FN2480 SNP T -> C AC=2;AN=200;BQB=0.496971;DP=4855;DP4=2356,2109,23,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=4.40595e-23;MQSB=0.94075;RPB=0.892729;SGB=2.62419;VDB=0.823104;EFF=INTERGENIC(MODIFIER||||||||||1) FN1097-S.SNP.12:22051470 chr12:022051470 0 W/22051470-22051470 FN1097-S Single Base Substitution C-A INTRON HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN2792-S.SNP.12:22052525 chr12:022052525 0 W/22052525-22052525 FN2792-S SNP C -> G AC=1;AN=198;BQB=0.804142;DP=4156;DP4=2217,1696,10,5;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0;MQB=4.05709e-07;MQSB=0.507518;RPB=0.576918;SGB=63.3342;VDB=0.282437;EFF=INTRON(MODIFIER||||108|LOC_Os12g36030|protein_coding|CODING|LOC_Os12g36030.2|1|1) FN3453-S.SNP.12:22055327 chr12:022055327 0 W/22055327-22055327 FN3453-S SNP C -> G AC=1;AN=184;BQB=0.778502;DP=2999;DP4=1633,1258,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.7702e-06;MQSB=0.954802;RPB=0.586696;SGB=53.2642;VDB=0.668189;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.12:22057267 chr12:022057267 0 W/22057267-22057267 FN3567-S SNP A -> T AC=1;AN=188;BQB=0.863023;DP=3163;DP4=1586,1438,12,15;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.15824e-12;MQSB=0.990189;RPB=0.549655;SGB=85.5904;VDB=0.605772;EFF=INTERGENIC(MODIFIER||||||||||1) FN968-S.SNP.12:22063418 chr12:022063418 0 W/22063418-22063418 FN968-S Single Base Substitution C-A INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN2719-S.SNP.12:22073437 chr12:022073437 0 W/22073437-22073437 FN2719-S SNP A -> T AC=1;AN=200;BQB=0.95092;DP=4994;DP4=2392,2404,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.22806e-08;MQSB=0.99983;RPB=0.832603;SGB=54.2646;VDB=0.691791;EFF=INTERGENIC(MODIFIER||||||||||1) FN3776-S.SNP.12:22077751 chr12:022077751 0 W/22077751-22077751 FN3776-S SNP T -> C AC=1;AN=190;BQB=0.812868;DP=3108;DP4=1516,1513,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.39694e-06;MQSB=0.991616;RPB=0.972716;SGB=32.5467;VDB=0.843405;EFF=INTERGENIC(MODIFIER||||||||||1) FN1392-S.SNP.12:22091005 chr12:022091005 0 W/22091005-22091005 FN1392-S Single Base Substitution T-C INTRON HOMO SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN2426.SNP.12:22093380 chr12:022093380 0 W/22093380-22093380 FN2426 SNP T -> A AC=1;AN=200;BQB=0.945427;DP=4796;DP4=2339,2232,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.69808e-17;MQSB=0.985606;RPB=0.991249;SGB=132.552;VDB=0.269996;EFF=INTERGENIC(MODIFIER||||||||||1) FN3834-S.SNP.12:22095033 chr12:022095033 0 W/22095033-22095033 FN3834-S SNP G -> T AC=1;AN=190;BQB=0.960752;DP=2743;DP4=1230,1428,7,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.09447e-12;MQSB=0.999973;RPB=0.636071;SGB=80.9724;VDB=0.223471;EFF=INTERGENIC(MODIFIER||||||||||1) FN4141-S.SNP.12:22098483 chr12:022098483 0 W/22098483-22098483 FN4141-S SNP G -> T AC=1;AN=170;BQB=0.960812;DP=2389;DP4=1250,1014,5,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.7706e-08;MQSB=0.800917;RPB=0.410586;SGB=47.8722;VDB=0.239031;EFF=INTRON(MODIFIER||||160|LOC_Os12g36050|protein_coding|CODING|LOC_Os12g36050.1|2|1) FN2681-S.SNP.12:22099640 chr12:022099640 0 W/22099640-22099640 FN2681-S SNP A -> T AC=1;AN=200;BQB=0.478156;DP=5031;DP4=2226,2561,7,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.0117e-14;MQSB=0.991199;RPB=0.587883;SGB=95.7111;VDB=0.260959;EFF=INTRON(MODIFIER||||160|LOC_Os12g36050|protein_coding|CODING|LOC_Os12g36050.1|4|1) FN2755-S.SNP.12:22100654 chr12:022100654 0 W/22100654-22100654 FN2755-S SNP G -> A AC=1;AN=200;BQB=0.992696;DP=4460;DP4=1927,2212,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.73097e-08;MQSB=0.936159;RPB=0.59301;SGB=54.2646;VDB=0.0813101;EFF=INTERGENIC(MODIFIER||||||||||1) FN1338-S.SNP.12:22100679 chr12:022100679 0 W/22100679-22100679 FN1338-S Single Base Substitution G-A INTERGENIC HET SNo: 1139, Mutant_ID: FN1338-S, Generation: M2, Mutations: 67, Genes: 171, Seed availability: Yes. FN2668-S.SNP.12:22101250 chr12:022101250 0 W/22101250-22101250 FN2668-S SNP T -> C AC=1;AN=200;BQB=0.13007;DP=4592;DP4=1970,2068,18,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.47428e-21;MQSB=0.968049;RPB=0.497687;SGB=76.378;VDB=0.577493;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggT/ggC|G67|117|LOC_Os12g36060|protein_coding|CODING|LOC_Os12g36060.1|1|1) FN2173-S.SNP.12:22105452 chr12:022105452 0 W/22105452-22105452 FN2173-S SNP G -> A AC=1;AN=168;BQB=0.0647112;DP=3330;DP4=1810,1463,8,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.08338e-08;MQSB=0.7191;RPB=0.806044;SGB=-68.0681;VDB=0.191146;EFF=INTERGENIC(MODIFIER||||||||||1) FN1239-S.SNP.12:22106376 chr12:022106376 0 W/22106376-22106376 FN1239-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN552-S.SNP.12:22106686 chr12:022106686 0 W/22106686-22106686 FN552-S Single Base Substitution G-A INTERGENIC HOMO SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN2725-S.SNP.12:22115824 chr12:022115824 0 W/22115824-22115824 FN2725-S SNP C -> T AC=1;AN=200;BQB=0.611105;DP=4834;DP4=2164,2304,11,6;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=1.96406e-06;MQSB=0.00863507;RPB=0.983129;SGB=51.0851;VDB=0.409933;EFF=INTERGENIC(MODIFIER||||||||||1) FN1419-S.SNP.12:22117068 chr12:022117068 0 W/22117068-22117068 FN1419-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1194, Mutant_ID: FN1419-S, Generation: M2, Mutations: 49, Genes: 8, Seed availability: Yes. FN564-S.SNP.12:22122132 chr12:022122132 0 W/22122132-22122132 FN564-S Single Base Substitution G-A INTERGENIC HET SNo: 556, Mutant_ID: FN564-S, Generation: M2, Mutations: 56, Genes: 26, Seed availability: Yes. FN-350.SNP.12:22130043 chr12:022130043 0 W/22130043-22130043 FN-350 Single Base Substitution T-C INTRON HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN4024-S.SNP.12:22131145 chr12:022131145 0 W/22131145-22131145 FN4024-S SNP T -> C AC=1;AN=168;BQB=0.403468;DP=2595;DP4=1267,1239,5,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.00145417;MQSB=0.999483;RPB=0.684044;SGB=24.4556;VDB=0.118721;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V604A|954|LOC_Os12g36100|protein_coding|CODING|LOC_Os12g36100.1|14|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V604A|947|LOC_Os12g36100|protein_coding|CODING|LOC_Os12g36100.2|14|1) FN3516-S.SNP.12:22140110 chr12:022140110 0 W/22140110-22140110 FN3516-S SNP C -> A AC=2;AN=188;BQB=0.99752;DP=2351;DP4=1143,1154,7,6;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.48874e-08;MQSB=0.900571;RPB=0.688229;SGB=53.5223;VDB=0.905446;EFF=INTERGENIC(MODIFIER||||||||||1) FN-233.SNP.12:22141428 chr12:022141428 0 W/22141428-22141428 FN-233 Single Base Substitution G-A INTERGENIC HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3837-S.SNP.12:22144012 chr12:022144012 0 W/22144012-22144012 FN3837-S SNP C -> T AC=1;AN=190;BQB=0.813449;DP=3031;DP4=1501,1399,11,8;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000659848;MQB=4.05111e-07;MQSB=0.99954;RPB=0.918123;SGB=33.8752;VDB=0.355608;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C122|668|LOC_Os12g36120|protein_coding|CODING|LOC_Os12g36120.1|1|1) FN999-S.SNP.12:22146492 chr12:022146492 0 W/22146492-22146492 FN999-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g36120 retrotransposon protein, putative, unclassified, expressed SNo: 902, Mutant_ID: FN999-S, Generation: M2, Mutations: 56, Genes: 16, Seed availability: Yes. FN4046-S.SNP.12:22147600 chr12:022147600 0 W/22147600-22147600 FN4046-S SNP T -> C AC=1;AN=168;BQB=0.709226;DP=3960;DP4=2466,1344,8,7;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.0113636;MQB=0.701287;MQSB=0;RPB=0.36554;SGB=22.1847;VDB=0.511433;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.12:22147999 chr12:022147999 0 W/22147999-22147999 FN897-S Single Base Substitution G-T INTERGENIC HET SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN2719-S.SNP.12:22153317 chr12:022153317 0 W/22153317-22153317 FN2719-S SNP T -> G AC=1;AN=200;BQB=0.507812;DP=4688;DP4=2272,2173,17,10;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0.00533276;MQB=2.70303e-10;MQSB=0.0217373;RPB=0.999437;SGB=87.1368;VDB=0.168086;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaA/gaC|E316D|864|LOC_Os12g36140|protein_coding|CODING|LOC_Os12g36140.1|1|1) FN1367-S.SNP.12:22153694 chr12:022153694 0 W/22153694-22153694 FN1367-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g36140 retrotransposon protein, putative, unclassified, expressed SNo: 1156, Mutant_ID: FN1367-S, Generation: M2, Mutations: 71, Genes: 94, Seed availability: Yes. FN2178-S.SNP.12:22154540 chr12:022154540 0 W/22154540-22154540 FN2178-S SNP G -> T AC=1;AN=168;BQB=0.522004;DP=2371;DP4=1242,1063,6,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00168705;MQB=4.12052e-07;MQSB=0.239506;RPB=0.42714;SGB=9.91396;VDB=0.28773;EFF=INTERGENIC(MODIFIER||||||||||1) FN2283.SNP.12:22156139 chr12:022156139 0 W/22156139-22156139 FN2283 SNP G -> A AC=1;AN=192;BQB=5.67252e-07;DP=4643;DP4=2219,2087,27,28;HOB=5.42535e-05;ICB=0.000109072;MQ=48;MQ0F=0.000430756;MQB=5.96665e-31;MQSB=0.263797;RPB=6.26617e-05;SGB=-945.705;VDB=0.878943;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q398*|893|LOC_Os12g36150|protein_coding|CODING|LOC_Os12g36150.1|1|1);LOF=(LOC_Os12g36150|LOC_Os12g36150|1|1.00);NMD=(LOC_Os12g36150|LOC_Os12g36150|1|1.00) FN3877-S.SNP.12:22164719 chr12:022164719 0 W/22164719-22164719 FN3877-S SNP A -> G AC=1;AN=158;BQB=0.917877;DP=2630;DP4=1386,1153,11,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.81811e-08;MQSB=0.776844;RPB=0.62976;SGB=68.9144;VDB=0.506803;EFF=INTRON(MODIFIER||||1288|LOC_Os12g36170|protein_coding|CODING|LOC_Os12g36170.1|7|1) FN-76.SNP.12:22170139 chr12:022170139 0 W/22170139-22170139 FN-76 Single Base Substitution G-T INTERGENIC HOMO SNo: 76, Mutant_ID: FN-76, Generation: M2, Mutations: 59, Genes: 83, Seed availability: Yes. FN2497.SNP.12:22174204 chr12:022174204 0 W/22174204-22174204 FN2497 SNP G -> A AC=1;AN=200;BQB=0.000967652;DP=4868;DP4=2567,2029,16,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.27265e-14;MQSB=0.999976;RPB=0.99938;SGB=-7.6637;VDB=0.580849;EFF=INTRON(MODIFIER||||925|LOC_Os12g36180|protein_coding|CODING|LOC_Os12g36180.1|7|1) FN-220.SNP.12:22180892 chr12:022180892 0 W/22180892-22180892 FN-220 Single Base Substitution T-G INTERGENIC HOMO SNo: 219, Mutant_ID: FN-220, Generation: M2, Mutations: 39, Genes: 4, Seed availability: Yes. FN2240-S.SNP.12:22197572 chr12:022197572 0 W/22197572-22197572 FN2240-S SNP G -> A AC=1;AN=190;BQB=0.555948;DP=4376;DP4=2132,1861,10,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.97033e-09;MQSB=0.99783;RPB=0.536424;SGB=-12.6681;VDB=0.668428;EFF=INTERGENIC(MODIFIER||||||||||1) FN971-S.SNP.12:22197660 chr12:022197660 0 W/22197660-22197660 FN971-S Single Base Substitution C-T INTERGENIC HET SNo: 875, Mutant_ID: FN971-S, Generation: M2, Mutations: 50, Genes: 12, Seed availability: Yes. FN796-S.SNP.12:22198542 chr12:022198542 0 W/22198542-22198542 FN796-S Single Base Substitution G-A INTERGENIC HOMO SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN2181-S.SNP.12:22201052 chr12:022201052 0 W/22201052-22201052 FN2181-S SNP C -> T AC=1;AN=190;BQB=0.585472;DP=3557;DP4=1840,1420,10,3;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.000281136;MQB=5.68875e-07;MQSB=0.00335913;RPB=0.549863;SGB=53.6492;VDB=0.243224;EFF=INTERGENIC(MODIFIER||||||||||1) FN3681-S.SNP.12:22202110 chr12:022202110 0 W/22202110-22202110 FN3681-S SNP G -> A AC=1;AN=190;BQB=0.996342;DP=3409;DP4=1616,1662,9,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.2597e-13;MQSB=0.189312;RPB=0.991381;SGB=13.4344;VDB=0.241055;EFF=INTERGENIC(MODIFIER||||||||||1) FN4221-S.SNP.12:22211881 chr12:022211881 0 W/22211881-22211881 FN4221-S SNP C -> T AC=1;AN=170;BQB=0.980195;DP=2610;DP4=1242,1280,8,5;HOB=6.92042e-05;ICB=0.000139222;MQ=29;MQ0F=0.0655172;MQB=0.855159;MQSB=0.0606214;RPB=0.293956;SGB=52.3148;VDB=0.632065;EFF=STOP_GAINED(HIGH|NONSENSE|tGg/tAg|W102*|1452|LOC_Os12g36260|protein_coding|CODING|LOC_Os12g36260.1|1|1) FN938-S.SNP.12:22220436 chr12:022220436 0 W/22220436-22220436 FN938-S Single Base Substitution C-T INTERGENIC HOMO SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN-136.SNP.12:22220891 chr12:022220891 0 W/22220891-22220891 FN-136 Single Base Substitution G-A INTERGENIC HET SNo: 136, Mutant_ID: FN-136, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN4107-S.SNP.12:22222869 chr12:022222869 0 W/22222869-22222869 FN4107-S SNP T -> G AC=2;AN=182;BQB=0.76658;DP=2888;DP4=1468,1320,12,15;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.90723e-16;MQSB=0.695174;RPB=0.817766;SGB=116.285;VDB=0.686261;EFF=INTERGENIC(MODIFIER||||||||||1) FN479-S.SNP.12:22225510 chr12:022225510 0 W/22225510-22225510 FN479-S Single Base Substitution C-T INTERGENIC HET SNo: 478, Mutant_ID: FN479-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN1537-S.SNP.12:22227870 chr12:022227870 0 W/22227870-22227870 FN1537-S Single Base Substitution G-A INTERGENIC Homo SNo: 1287, Mutant_ID: FN1537-S, Generation: M2, Mutations: 90, Genes: 16, Seed availability: Yes. FN3675-S.SNP.12:22227870 chr12:022227870 0 W/22227870-22227870 FN3675-S SNP G -> A AC=2;AN=190;BQB=0.844007;DP=3185;DP4=1617,1431,16,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.57228e-19;MQSB=0.999878;RPB=0.626806;SGB=153.834;VDB=0.217567;EFF=INTERGENIC(MODIFIER||||||||||1) FN859-S.SNP.12:22227870 chr12:022227870 0 W/22227870-22227870 FN859-S Single Base Substitution G-A INTERGENIC HET SNo: 765, Mutant_ID: FN859-S, Generation: M2, Mutations: 64, Genes: 32, Seed availability: Yes. FN242-S.SNP.12:22228950 chr12:022228950 0 W/22228950-22228950 FN242-S Single Base Substitution A-G INTERGENIC HET SNo: 241, Mutant_ID: FN242-S, Generation: M2, Mutations: 54, Genes: 103, Seed availability: Yes. FN2339.SNP.12:22233313 chr12:022233313 0 W/22233313-22233313 FN2339 SNP T -> C AC=1;AN=192;BQB=0.921663;DP=3978;DP4=1706,1985,3,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.28274e-06;MQSB=0.8782;RPB=0.601754;SGB=25.5227;VDB=0.474122;EFF=INTERGENIC(MODIFIER||||||||||1) FN4123-S.SNP.12:22241917 chr12:022241917 0 W/22241917-22241917 FN4123-S SNP C -> T AC=2;AN=182;BQB=0.926017;DP=2484;DP4=952,1344,6,18;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.03321e-09;MQSB=0.382525;RPB=0.216168;SGB=45.7418;VDB=0.459449;EFF=INTERGENIC(MODIFIER||||||||||1) FN4064-S.SNP.12:22246380 chr12:022246380 0 W/22246380-22246380 FN4064-S SNP G -> A AC=2;AN=168;BQB=0.939049;DP=2573;DP4=1304,1158,15,3;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.12675e-08;MQSB=0.882503;RPB=0.63575;SGB=74.3269;VDB=0.440254;EFF=INTRON(MODIFIER||||436|LOC_Os12g36330|protein_coding|CODING|LOC_Os12g36330.1|1|1) FN-281.SNP.12:22246635 chr12:022246635 0 W/22246635-22246635 FN-281 Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g36330 expressed protein SNo: 277, Mutant_ID: FN-281, Generation: M2, Mutations: 77, Genes: 20, Seed availability: Yes. FN3437-S.SNP.12:22249474 chr12:022249474 0 W/22249474-22249474 FN3437-S SNP C -> A AC=1;AN=184;BQB=0.958247;DP=2863;DP4=1457,1351,5,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.01316e-08;MQSB=0.999981;RPB=0.934252;SGB=48.7425;VDB=0.377547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2105-S.SNP.12:22256902 chr12:022256902 0 W/22256902-22256902 FN2105-S SNP G -> A AC=1;AN=168;BQB=0.370576;DP=3831;DP4=2011,1778,12,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.85055e-08;MQSB=0.999682;RPB=0.996795;SGB=-14.5109;VDB=0.753164;EFF=INTERGENIC(MODIFIER||||||||||1) FN-361.SNP.12:22257509 chr12:022257509 0 W/22257509-22257509 FN-361 Single Base Substitution T-C INTERGENIC HOMO SNo: 350, Mutant_ID: FN-361, Generation: M2, Mutations: 60, Genes: 31, Seed availability: No. FN3460-S.SNP.12:22258313 chr12:022258313 0 W/22258313-22258313 FN3460-S SNP C -> T AC=1;AN=184;BQB=0.995862;DP=2617;DP4=1285,1278,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.22148e-08;MQSB=0.978516;RPB=0.868578;SGB=32.2261;VDB=0.110322;EFF=INTERGENIC(MODIFIER||||||||||1) FN3998-S.SNP.12:22261786 chr12:022261786 0 W/22261786-22261786 FN3998-S SNP G -> C AC=2;AN=168;BQB=0.999112;DP=1941;DP4=770,1033,5,6;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.28826e-05;MQSB=0.978424;RPB=0.334565;SGB=43.3113;VDB=0.431136;EFF=INTRON(MODIFIER||||267|LOC_Os12g36360|protein_coding|CODING|LOC_Os12g36360.1|4|1) FN4106-S.SNP.12:22264244 chr12:022264244 0 W/22264244-22264244 FN4106-S SNP A -> C AC=2;AN=182;BQB=0.840541;DP=2390;DP4=1058,1184,15,24;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=4.3679e-22;MQSB=0.564047;RPB=0.470263;SGB=141.089;VDB=0.225686;EFF=INTERGENIC(MODIFIER||||||||||1) FN2240-S.SNP.12:22269512 chr12:022269512 0 W/22269512-22269512 FN2240-S SNP C -> A AC=2;AN=190;BQB=0.528374;DP=3912;DP4=2054,1403,12,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00383436;MQB=5.95223e-07;MQSB=1.06386e-15;RPB=0.684707;SGB=85.8548;VDB=0.224555;EFF=INTERGENIC(MODIFIER||||||||||1) FN3600-S.SNP.12:22269512 chr12:022269512 0 W/22269512-22269512 FN3600-S SNP C -> A AC=2;AN=190;BQB=0.862105;DP=2326;DP4=1207,945,18,6;HOB=0.020831;ICB=0.494793;MQ=47;MQ0F=0.00257954;MQB=7.30475e-08;MQSB=0.00325583;RPB=0.91389;SGB=-10.4526;VDB=0.571824;EFF=INTERGENIC(MODIFIER||||||||||1) FN1281-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN1281-S Single Base Substitution T-G STOP_GAINED HOMO LOC_Os12g36380 retrotransposon protein, putative, unclassified SNo: 1095, Mutant_ID: FN1281-S, Generation: M2, Mutations: 55, Genes: 88, Seed availability: Yes. FN1326-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN1326-S Single Base Substitution T-G STOP_GAINED HET LOC_Os12g36380 retrotransposon protein, putative, unclassified SNo: 1129, Mutant_ID: FN1326-S, Generation: M2, Mutations: 69, Genes: 90, Seed availability: Yes. FN1409-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN1409-S Single Base Substitution T-G STOP_GAINED HOMO LOC_Os12g36380 retrotransposon protein, putative, unclassified SNo: 1186, Mutant_ID: FN1409-S, Generation: M2, Mutations: 69, Genes: 22, Seed availability: Yes. FN2214-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN2214-S SNP T -> G AC=2;AN=190;BQB=4.23395e-08;DP=2334;DP4=477,933,59,64;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.0269923;MQB=2.23974e-39;MQSB=1.4567e-16;RPB=3.51953e-05;SGB=-667.009;VDB=0.369186;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taG|Y379*|657|LOC_Os12g36380|protein_coding|CODING|LOC_Os12g36380.1|2|1) FN3504-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN3504-S SNP T -> G AC=1;AN=188;BQB=0.0610311;DP=2445;DP4=387,1037,48,56;HOB=5.65867e-05;ICB=0.000113775;MQ=39;MQ0F=0.0212679;MQB=7.09108e-36;MQSB=2.20929e-41;RPB=0.910509;SGB=-660.584;VDB=0.985985;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taG|Y379*|657|LOC_Os12g36380|protein_coding|CODING|LOC_Os12g36380.1|2|1) FN495-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN495-S Single Base Substitution T-G STOP_GAINED HOMO LOC_Os12g36380 retrotransposon protein, putative, unclassified SNo: 493, Mutant_ID: FN495-S, Generation: M2, Mutations: 71, Genes: 35, Seed availability: Yes. FN927-S.SNP.12:22272343 chr12:022272343 0 W/22272343-22272343 FN927-S Single Base Substitution T-G STOP_GAINED HOMO LOC_Os12g36380 retrotransposon protein, putative, unclassified SNo: 833, Mutant_ID: FN927-S, Generation: M2, Mutations: 79, Genes: 15, Seed availability: Yes. FN2758-S.SNP.12:22274022 chr12:022274022 0 W/22274022-22274022 FN2758-S SNP T -> C AC=1;AN=200;BQB=0.197794;DP=4785;DP4=2213,2350,8,6;HOB=5e-05;ICB=0.0001005;MQ=37;MQ0F=0.0480669;MQB=0.837753;MQSB=9.81007e-30;RPB=0.881095;SGB=40.2696;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-116-1.SNP.12:22283197 chr12:022283197 0 W/22283197-22283197 FN_N1-116-1 Single Base Substitution C-A Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN-54.SNP.12:22289773 chr12:022289773 0 W/22289773-22289773 FN-54 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g36420 expressed protein SNo: 54, Mutant_ID: FN-54, Generation: M2, Mutations: 43, Genes: 86, Seed availability: Yes. FN4247-S.SNP.12:22298849 chr12:022298849 0 W/22298849-22298849 FN4247-S SNP G -> A AC=1;AN=170;BQB=0.986318;DP=2653;DP4=1223,1337,7,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.07998e-06;MQSB=0.916097;RPB=0.379458;SGB=52.3148;VDB=0.623379;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gTt|A164V|846|LOC_Os12g36440|protein_coding|CODING|LOC_Os12g36440.1|2|1) FN1295-S.SNP.12:22306171 chr12:022306171 0 W/22306171-22306171 FN1295-S Single Base Substitution G-A INTERGENIC HET SNo: 1106, Mutant_ID: FN1295-S, Generation: M2, Mutations: 64, Genes: 13, Seed availability: Yes. FN968-S.SNP.12:22307835 chr12:022307835 0 W/22307835-22307835 FN968-S Single Base Substitution C-T INTERGENIC HOMO SNo: 872, Mutant_ID: FN968-S, Generation: M2, Mutations: 64, Genes: 20, Seed availability: Yes. FN3463-S.SNP.12:22315869 chr12:022315869 0 W/22315869-22315869 FN3463-S SNP G -> A AC=1;AN=184;BQB=0.913583;DP=2854;DP4=1412,1364,12,9;HOB=5.90737e-05;ICB=0.00011879;MQ=34;MQ0F=0.0539594;MQB=0.6079;MQSB=0.0735771;RPB=0.968154;SGB=89.4385;VDB=0.665842;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGc/tAc|C131Y|1091|LOC_Os12g36470|protein_coding|CODING|LOC_Os12g36470.1|1|1) FN2328.SNP.12:22316286 chr12:022316286 0 W/22316286-22316286 FN2328 SNP C -> G AC=1;AN=192;BQB=0.851804;DP=4679;DP4=2334,2006,17,12;HOB=5.42535e-05;ICB=0.000109072;MQ=20;MQ0F=0.0968156;MQB=0.980931;MQSB=0.52077;RPB=0.918393;SGB=-7.43215;VDB=0.4882;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCt/gGt|A270G|1091|LOC_Os12g36470|protein_coding|CODING|LOC_Os12g36470.1|1|1) FN2224-S.SNP.12:22319313 chr12:022319313 0 W/22319313-22319313 FN2224-S SNP C -> T AC=2;AN=190;BQB=0.604245;DP=5910;DP4=2369,2920,30,23;HOB=0.020831;ICB=0.494793;MQ=13;MQ0F=0.239425;MQB=0.119366;MQSB=0;RPB=0.98097;SGB=5.60984;VDB=0.62919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3309-S.SNP.12:22320519 chr12:022320519 0 W/22320519-22320519 FN3309-S SNP C -> T AC=2;AN=184;BQB=0.975066;DP=1784;DP4=704,1009,9,12;HOB=0.0215028;ICB=0.494625;MQ=36;MQ0F=0.0381166;MQB=0.831377;MQSB=8.66304e-07;RPB=0.979603;SGB=63.9222;VDB=0.498373;EFF=INTERGENIC(MODIFIER||||||||||1) FN3818-S.SNP.12:22327658 chr12:022327658 0 W/22327658-22327658 FN3818-S SNP G -> C AC=1;AN=190;BQB=0.806528;DP=3171;DP4=1621,1431,6,9;HOB=5.54017e-05;ICB=0.000111386;MQ=36;MQ0F=0.0747398;MQB=0.610107;MQSB=2.89256e-18;RPB=0.973097;SGB=43.2083;VDB=0.928745;EFF=INTERGENIC(MODIFIER||||||||||1) FN-24.SNP.12:22330083 chr12:022330083 0 W/22330083-22330083 FN-24 Single Base Substitution G-T NON_SYNONYMOUS_CODING Homo LOC_Os12g36490 expressed protein SNo: 24, Mutant_ID: FN-24, Generation: M2, Mutations: 27, Genes: 8, Seed availability: Yes. FN956-S.SNP.12:22331377 chr12:022331377 0 W/22331377-22331377 FN956-S Single Base Substitution C-A INTRON HOMO SNo: 861, Mutant_ID: FN956-S, Generation: M2, Mutations: 62, Genes: 17, Seed availability: Yes. FN3375-S.SNP.12:22335654 chr12:022335654 0 W/22335654-22335654 FN3375-S SNP G -> C AC=1;AN=184;BQB=0.951574;DP=2965;DP4=1233,1655,6,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.95698e-08;MQSB=0.989669;RPB=0.946755;SGB=48.7425;VDB=0.278215;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.12:22336443 chr12:022336443 0 W/22336443-22336443 FN1332-S Single Base Substitution C-T INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN585-S.SNP.12:22337516 chr12:022337516 0 W/22337516-22337516 FN585-S Single Base Substitution C-T INTERGENIC HOMO SNo: 571, Mutant_ID: FN585-S, Generation: M2, Mutations: 61, Genes: 209, Seed availability: Yes. FN2618-S.SNP.12:22341289 chr12:022341289 0 W/22341289-22341289 FN2618-S SNP A -> G AC=1;AN=198;BQB=0.0745513;DP=4205;DP4=2040,1861,13,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.64817e-12;MQSB=0.996438;RPB=0.983257;SGB=90.9049;VDB=0.419104;EFF=INTERGENIC(MODIFIER||||||||||1) FN-256.SNP.12:22344467 chr12:022344467 0 W/22344467-22344467 FN-256 Single Base Substitution T-C INTERGENIC HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN2593-S.SNP.12:22346733 chr12:022346733 0 W/22346733-22346733 FN2593-S SNP T -> G AC=1;AN=190;BQB=0.326584;DP=3924;DP4=1877,1840,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.7533e-08;MQSB=0.894916;RPB=0.961165;SGB=49.5489;VDB=0.383963;EFF=INTERGENIC(MODIFIER||||||||||1) FN897-S.SNP.12:22347169 chr12:022347169 0 W/22347169-22347169 FN897-S Single Base Substitution A-G INTERGENIC HOMO SNo: 803, Mutant_ID: FN897-S, Generation: M2, Mutations: 92, Genes: 40, Seed availability: No. FN476-S.SNP.12:22362400 chr12:022362400 0 W/22362400-22362400 FN476-S Single Base Substitution T-C INTRON HET SNo: 475, Mutant_ID: FN476-S, Generation: M2, Mutations: 72, Genes: 16, Seed availability: Yes. FN928-S.SNP.12:22365167 chr12:022365167 0 W/22365167-22365167 FN928-S Single Base Substitution G-C INTRON HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN2473.SNP.12:22366109 chr12:022366109 0 W/22366109-22366109 FN2473 SNP G -> A AC=1;AN=200;BQB=0.94886;DP=4056;DP4=2141,1746,11,3;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20476e-08;MQSB=0.480292;RPB=0.974348;SGB=58.8698;VDB=0.74332;EFF=INTERGENIC(MODIFIER||||||||||1) FN632-S.SNP.12:22373873 chr12:022373873 0 W/22373873-22373873 FN632-S Single Base Substitution C-A INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN1446-S.SNP.12:22378261 chr12:022378261 0 W/22378261-22378261 FN1446-S Single Base Substitution C-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN3325-S.SNP.12:22382328 chr12:022382328 0 W/22382328-22382328 FN3325-S SNP G -> C AC=1;AN=184;BQB=0.904399;DP=3690;DP4=1898,1667,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.000271003;MQB=8.35485e-06;MQSB=0.990767;RPB=0.861378;SGB=35.1773;VDB=0.815679;EFF=INTRON(MODIFIER||||1322|LOC_Os12g36550|protein_coding|CODING|LOC_Os12g36550.1|4|1) FN4184-S.SNP.12:22383789 chr12:022383789 0 W/22383789-22383789 FN4184-S SNP C -> T AC=1;AN=170;BQB=0.929202;DP=2126;DP4=1057,999,2,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0.000470367;MQB=1.27639e-05;MQSB=0.976478;RPB=0.940072;SGB=34.5445;VDB=0.0288954;EFF=INTRON(MODIFIER||||1322|LOC_Os12g36550|protein_coding|CODING|LOC_Os12g36550.1|5|1) FN-291.SNP.12:22384022 chr12:022384022 0 W/22384022-22384022 FN-291 Single Base Substitution G-A INTRON HET SNo: 287, Mutant_ID: FN-291, Generation: M2, Mutations: 54, Genes: 28, Seed availability: Yes. FN1097-S.SNP.12:22388227 chr12:022388227 0 W/22388227-22388227 FN1097-S Single Base Substitution C-G SYNONYMOUS_CODING HET SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1142-S.SNP.12:22394803 chr12:022394803 0 W/22394803-22394803 FN1142-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1005, Mutant_ID: FN1142-S, Generation: M2, Mutations: 57, Genes: 38, Seed availability: Yes. FN3839-S.SNP.12:22400206 chr12:022400206 0 W/22400206-22400206 FN3839-S SNP A -> T AC=1;AN=190;BQB=0.94757;DP=2655;DP4=1279,1299,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.80468e-07;MQSB=0.980982;RPB=0.339198;SGB=10.8904;VDB=0.665828;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.12:22401211 chr12:022401211 0 W/22401211-22401211 FN814-S Single Base Substitution C-T INTERGENIC HET SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN1297-S.SNP.12:22401418 chr12:022401418 0 W/22401418-22401418 FN1297-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN4312-S.SNP.12:22406307 chr12:022406307 0 W/22406307-22406307 FN4312-S SNP G -> A AC=1;AN=170;BQB=0.923563;DP=2493;DP4=1347,1087,2,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.19435e-05;MQSB=0.912101;RPB=0.0737842;SGB=17.6652;VDB=0.0149391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gAt|G378D|1050|LOC_Os12g36590|protein_coding|CODING|LOC_Os12g36590.1|2|1) FN-295.SNP.12:22409167 chr12:022409167 0 W/22409167-22409167 FN-295 Single Base Substitution A-G INTRON HET SNo: 291, Mutant_ID: FN-295, Generation: M2, Mutations: 45, Genes: 7, Seed availability: Yes. FN2365.SNP.12:22410821 chr12:022410821 0 W/22410821-22410821 FN2365 SNP T -> A AC=1;AN=192;BQB=0.38678;DP=4797;DP4=2168,2352,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.1994e-10;MQSB=0.909875;RPB=0.116647;SGB=28.9139;VDB=0.146788;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caT/caA|H915Q|1050|LOC_Os12g36590|protein_coding|CODING|LOC_Os12g36590.1|8|1) FN581-S.SNP.12:22412941 chr12:022412941 0 W/22412941-22412941 FN581-S Single Base Substitution C-A INTERGENIC HET SNo: 569, Mutant_ID: FN581-S, Generation: M2, Mutations: 73, Genes: 36, Seed availability: Yes. FN3845-S.SNP.12:22416934 chr12:022416934 0 W/22416934-22416934 FN3845-S SNP C -> T AC=1;AN=190;BQB=0.740249;DP=2634;DP4=1156,1367,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000564098;MQSB=0.890589;RPB=0.532863;SGB=35.4339;VDB=0.594468;EFF=INTERGENIC(MODIFIER||||||||||1) FN982-S.SNP.12:22424130 chr12:022424130 0 W/22424130-22424130 FN982-S Single Base Substitution G-A INTRON HOMO SNo: 886, Mutant_ID: FN982-S, Generation: M2, Mutations: 75, Genes: 21, Seed availability: Yes. FN3768-S.SNP.12:22425806 chr12:022425806 0 W/22425806-22425806 FN3768-S SNP A -> G AC=1;AN=190;BQB=0.999327;DP=2955;DP4=1533,1327,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.13439e-11;MQSB=0.988712;RPB=0.680354;SGB=80.9724;VDB=0.779398;EFF=SYNONYMOUS_CODING(LOW|SILENT|aaT/aaC|N460|1176|LOC_Os12g36620|protein_coding|CODING|LOC_Os12g36620.1|1|1) FN3464-S.SNP.12:22431133 chr12:022431133 0 W/22431133-22431133 FN3464-S SNP C -> T AC=1;AN=184;BQB=0.769436;DP=3179;DP4=1644,1404,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.94449e-05;MQSB=0.612079;RPB=0.985773;SGB=44.2207;VDB=0.244899;EFF=INTRON(MODIFIER||||172|LOC_Os12g36640|protein_coding|CODING|LOC_Os12g36640.1|2|1),INTRON(MODIFIER||||169|LOC_Os12g36640|protein_coding|CODING|LOC_Os12g36640.2|2|1) FN2160-S.SNP.12:22432770 chr12:022432770 0 W/22432770-22432770 FN2160-S SNP A -> T AC=2;AN=168;BQB=0.0297619;DP=4544;DP4=2018,2458,30,21;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.38028e-25;MQSB=0.968885;RPB=0.999347;SGB=-112.005;VDB=0.0679691;EFF=INTERGENIC(MODIFIER||||||||||1) FN4258-S.SNP.12:22436818 chr12:022436818 0 W/22436818-22436818 FN4258-S SNP A -> C AC=1;AN=170;BQB=0.957726;DP=2428;DP4=1219,1110,5,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=1.2424e-05;MQSB=0.999693;RPB=0.953803;SGB=17.6652;VDB=0.387294;EFF=INTERGENIC(MODIFIER||||||||||1) FN2282.SNP.12:22439012 chr12:022439012 0 W/22439012-22439012 FN2282 SNP G -> A AC=1;AN=192;BQB=0.757553;DP=4706;DP4=2324,2011,18,24;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.93932e-26;MQSB=0.899976;RPB=0.331368;SGB=93.0226;VDB=0.147599;EFF=INTERGENIC(MODIFIER||||||||||1) FN-33.SNP.12:22442401 chr12:022442401 0 W/22442401-22442401 FN-33 Single Base Substitution T-A INTERGENIC Homo SNo: 33, Mutant_ID: FN-33, Generation: M2, Mutations: 22, Genes: 4, Seed availability: Yes. FN1602-S.SNP.12:22453002 chr12:022453002 0 W/22453002-22453002 FN1602-S Single Base Substitution G-A INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN1602-S.SNP.12:22455917 chr12:022455917 0 W/22455917-22455917 FN1602-S Single Base Substitution C-T INTERGENIC HET SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN2345.SNP.12:22455976 chr12:022455976 0 W/22455976-22455976 FN2345 SNP A -> G AC=1;AN=192;BQB=0.151534;DP=4156;DP4=1701,2117,7,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.70475e-07;MQSB=0.878387;RPB=0.977056;SGB=46.9087;VDB=0.00294196;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.12:22459630 chr12:022459630 0 W/22459630-22459630 FN815-S Single Base Substitution T-C INTRON HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3738-S.SNP.12:22459668 chr12:022459668 0 W/22459668-22459668 FN3738-S SNP G -> A AC=1;AN=190;BQB=0.458764;DP=2922;DP4=1512,1307,10,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.01526e-07;MQSB=0.998396;RPB=0.590673;SGB=28.7675;VDB=0.256859;EFF=INTRON(MODIFIER||||659|LOC_Os12g36670|protein_coding|CODING|LOC_Os12g36670.1|2|1) FN633-S.SNP.12:22470436 chr12:022470436 0 W/22470436-22470436 FN633-S Single Base Substitution T-C INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN1358-S.SNP.12:22471676 chr12:022471676 0 W/22471676-22471676 FN1358-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1153, Mutant_ID: FN1358-S, Generation: M2, Mutations: 64, Genes: 9, Seed availability: Yes. FN973-S.SNP.12:22473804 chr12:022473804 0 W/22473804-22473804 FN973-S Single Base Substitution T-C INTERGENIC HET SNo: 877, Mutant_ID: FN973-S, Generation: M2, Mutations: 89, Genes: 41, Seed availability: Yes. FN319-S.SNP.12:22476872 chr12:022476872 0 W/22476872-22476872 FN319-S Single Base Substitution G-A INTERGENIC HET SNo: 314, Mutant_ID: FN319-S, Generation: M2, Mutations: 64, Genes: 28, Seed availability: Yes. FN1680-S.SNP.12:22477118 chr12:022477118 0 W/22477118-22477118 FN1680-S SNP G -> A AC=2;AN=188;BQB=0.473663;DP=3685;DP4=2130,1473,31,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.46142e-20;MQSB=0.982013;RPB=0.34188;SGB=-255.847;VDB=0.0295765;EFF=UTR_3_PRIME(MODIFIER||237||918|LOC_Os12g36690|protein_coding|CODING|LOC_Os12g36690.1|3|1) FN2375.SNP.12:22483344 chr12:022483344 0 W/22483344-22483344 FN2375 SNP G -> T AC=1;AN=192;BQB=0.55716;DP=4885;DP4=2225,2395,9,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.07032e-08;MQSB=0.982371;RPB=0.999707;SGB=39.78;VDB=0.62439;EFF=INTERGENIC(MODIFIER||||||||||1) FN1533-S.SNP.12:22490891 chr12:022490891 0 W/22490891-22490891 FN1533-S Single Base Substitution A-G INTRON HET SNo: 1283, Mutant_ID: FN1533-S, Generation: M2, Mutations: 111, Genes: 29, Seed availability: Yes. FN1229-S.SNP.12:22502655 chr12:022502655 0 W/22502655-22502655 FN1229-S Single Base Substitution T-A INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1229-S.SNP.12:22502658 chr12:022502658 0 W/22502658-22502658 FN1229-S Single Base Substitution T-C INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN2221-S.SNP.12:22505181 chr12:022505181 0 W/22505181-22505181 FN2221-S SNP G -> T AC=2;AN=190;BQB=0.407033;DP=3488;DP4=1740,1449,16,24;HOB=0.020831;ICB=0.494793;MQ=48;MQ0F=0.000286697;MQB=1.43219e-19;MQSB=0.000474253;RPB=0.15906;SGB=132.055;VDB=0.209562;EFF=INTERGENIC(MODIFIER||||||||||1) FN2200-S.SNP.12:22510467 chr12:022510467 0 W/22510467-22510467 FN2200-S SNP T -> A AC=1;AN=190;BQB=0.978337;DP=4961;DP4=2282,2409,9,10;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0175368;MQB=0.818131;MQSB=0.00110145;RPB=0.956123;SGB=33.8752;VDB=0.524014;EFF=UTR_3_PRIME(MODIFIER||719||138|LOC_Os12g36740|protein_coding|CODING|LOC_Os12g36740.2|6|1),UTR_3_PRIME(MODIFIER||107||196|LOC_Os12g36740|protein_coding|CODING|LOC_Os12g36740.1|6|1) FN2188-S.SNP.12:22514065 chr12:022514065 0 W/22514065-22514065 FN2188-S SNP C -> T AC=1;AN=190;BQB=0.888944;DP=4760;DP4=1917,2490,12,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.74364e-12;MQSB=0.750143;RPB=0.919927;SGB=99.1879;VDB=0.620045;EFF=INTRON(MODIFIER||||454|LOC_Os12g36750|protein_coding|CODING|LOC_Os12g36750.2|1|1),INTRON(MODIFIER||||454|LOC_Os12g36750|protein_coding|CODING|LOC_Os12g36750.3|2|1),INTRON(MODIFIER||||454|LOC_Os12g36750|protein_coding|CODING|LOC_Os12g36750.1|1|1) FN2453.SNP.12:22536710 chr12:022536710 0 W/22536710-22536710 FN2453 SNP C -> G AC=1;AN=200;BQB=0.727111;DP=3588;DP4=966,2369,2,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000278707;MQB=0.000113613;MQSB=2.78721e-09;RPB=0.98789;SGB=1.46408;VDB=0.90102;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.12:22540210 chr12:022540210 0 W/22540210-22540210 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN-411.SNP.12:22542881 chr12:022542881 0 W/22542881-22542881 FN-411 Single Base Substitution A-T INTERGENIC HET SNo: 408, Mutant_ID: FN-411, Generation: M2, Mutations: 58, Genes: 128, Seed availability: Yes. FN2698-S.SNP.12:22546728 chr12:022546728 0 W/22546728-22546728 FN2698-S SNP T -> A AC=1;AN=200;BQB=0.439446;DP=5574;DP4=2932,2458,19,26;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.54685e-23;MQSB=0.963403;RPB=0.396132;SGB=152.03;VDB=0.844139;EFF=INTERGENIC(MODIFIER||||||||||1) FN3434-S.SNP.12:22554218 chr12:022554218 0 W/22554218-22554218 FN3434-S SNP C -> T AC=1;AN=184;BQB=0.627296;DP=4715;DP4=2073,2522,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=23;MQ0F=0.251113;MQB=0.140024;MQSB=0;RPB=0.770249;SGB=20.7533;VDB=0.723817;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Tca|P1782S|1904|LOC_Os12g36780|protein_coding|CODING|LOC_Os12g36780.1|3|1) FN2790-S.SNP.12:22554428 chr12:022554428 0 W/22554428-22554428 FN2790-S SNP G -> A AC=1;AN=198;BQB=0.447535;DP=4686;DP4=1674,2809,6,8;HOB=5.10152e-05;ICB=0.000102546;MQ=22;MQ0F=0.258216;MQB=0.167885;MQSB=0;RPB=0.955617;SGB=58.7391;VDB=0.28301;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V1852I|1904|LOC_Os12g36780|protein_coding|CODING|LOC_Os12g36780.1|3|1) FN923-S.SNP.12:22554722 chr12:022554722 0 W/22554722-22554722 FN923-S Single Base Substitution C-T INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN923-S.SNP.12:22554723 chr12:022554723 0 W/22554723-22554723 FN923-S Single Base Substitution T-C INTERGENIC HET SNo: 829, Mutant_ID: FN923-S, Generation: M2, Mutations: 82, Genes: 110, Seed availability: Yes. FN718-S.SNP.12:22555269 chr12:022555269 0 W/22555269-22555269 FN718-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g36790 retrotransposon protein, putative, unclassified, expressed SNo: 645, Mutant_ID: FN718-S, Generation: M2, Mutations: 77, Genes: 31, Seed availability: Yes. FN752-S.SNP.12:22556074 chr12:022556074 0 W/22556074-22556074 FN752-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN1269-S.SNP.12:22556214 chr12:022556214 0 W/22556214-22556214 FN1269-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1083, Mutant_ID: FN1269-S, Generation: M2, Mutations: 66, Genes: 56, Seed availability: Yes. FN2220-S.SNP.12:22556478 chr12:022556478 0 W/22556478-22556478 FN2220-S SNP C -> G AC=2;AN=190;BQB=0.70619;DP=3603;DP4=1640,1549,9,15;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.0155426;MQB=0.00388132;MQSB=0.0854216;RPB=0.0447788;SGB=75.1932;VDB=0.0723804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Ctc|V644L|1105|LOC_Os12g36790|protein_coding|CODING|LOC_Os12g36790.1|2|1) FN3312-S.SNP.12:22557341 chr12:022557341 0 W/22557341-22557341 FN3312-S SNP C -> T AC=1;AN=184;BQB=0.98488;DP=3117;DP4=1564,1464,13,13;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.0121912;MQB=1.16149e-05;MQSB=1.39441e-05;RPB=0.644539;SGB=81.5311;VDB=0.675985;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggG/ggA|G387|1105|LOC_Os12g36790|protein_coding|CODING|LOC_Os12g36790.1|1|1) FN1499-S.SNP.12:22557785 chr12:022557785 0 W/22557785-22557785 FN1499-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1258, Mutant_ID: FN1499-S, Generation: M2, Mutations: 84, Genes: 13, Seed availability: Yes. FN2289.SNP.12:22558544 chr12:022558544 0 W/22558544-22558544 FN2289 SNP A -> G AC=1;AN=192;BQB=0.907503;DP=4939;DP4=2220,2273,16,15;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00627657;MQB=1.53432e-08;MQSB=0.742833;RPB=0.982622;SGB=29.2557;VDB=0.273601;EFF=INTERGENIC(MODIFIER||||||||||1) FN-191.SNP.12:22560377 chr12:022560377 0 W/22560377-22560377 FN-191 Single Base Substitution C-T INTERGENIC HET SNo: 191, Mutant_ID: FN-191, Generation: M2, Mutations: 70, Genes: 26, Seed availability: Yes. FN3748-S.SNP.12:22560720 chr12:022560720 0 W/22560720-22560720 FN3748-S SNP G -> A AC=1;AN=190;BQB=0.706452;DP=2311;DP4=841,1358,4,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.09882e-07;MQSB=0.999511;RPB=0.938262;SGB=67.3108;VDB=0.0382644;EFF=INTERGENIC(MODIFIER||||||||||1) FN517-S.SNP.12:22567382 chr12:022567382 0 W/22567382-22567382 FN517-S Single Base Substitution G-A INTERGENIC HET SNo: 515, Mutant_ID: FN517-S, Generation: M2, Mutations: 53, Genes: 69, Seed availability: Yes. FN1744-S.SNP.12:22568086 chr12:022568086 0 W/22568086-22568086 FN1744-S SNP T -> C AC=1;AN=188;BQB=0.974716;DP=3614;DP4=1804,1773,12,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.44789e-13;MQSB=0.978948;RPB=0.685016;SGB=-11.1967;VDB=0.768975;EFF=INTERGENIC(MODIFIER||||||||||1) FN2453.SNP.12:22582398 chr12:022582398 0 W/22582398-22582398 FN2453 SNP C -> T AC=1;AN=200;BQB=0.307888;DP=4210;DP4=2187,1796,10,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.81978e-07;MQSB=0.974282;RPB=0.867992;SGB=47.4799;VDB=0.939879;EFF=INTERGENIC(MODIFIER||||||||||1) FN2781-S.SNP.12:22592485 chr12:022592485 0 W/22592485-22592485 FN2781-S SNP G -> A AC=1;AN=198;BQB=0.945619;DP=4187;DP4=1925,1988,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=48;MQ0F=0;MQB=1.83603e-11;MQSB=0.999705;RPB=0.557099;SGB=50.1053;VDB=0.0718456;EFF=INTRON(MODIFIER||||158|LOC_Os12g36850|protein_coding|CODING|LOC_Os12g36850.1|1|1) FN2575-S.SNP.12:22593890 chr12:022593890 0 W/22593890-22593890 FN2575-S SNP T -> C AC=1;AN=198;BQB=0.974523;DP=4211;DP4=1979,2022,11,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.09509e-12;MQSB=0.905361;RPB=0.97547;SGB=76.1002;VDB=0.0237649;EFF=INTERGENIC(MODIFIER||||||||||1) FN873-S.SNP.12:22601203 chr12:022601203 0 W/22601203-22601203 FN873-S Single Base Substitution G-A UTR_3_PRIME HOMO SNo: 779, Mutant_ID: FN873-S, Generation: M2, Mutations: 72, Genes: 36, Seed availability: Yes. FN3380-S.SNP.12:22608654 chr12:022608654 0 W/22608654-22608654 FN3380-S SNP C -> T AC=1;AN=184;BQB=0.96411;DP=3223;DP4=1344,1751,8,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.53811e-08;MQSB=0.999297;RPB=0.553021;SGB=53.3568;VDB=0.260286;EFF=INTERGENIC(MODIFIER||||||||||1) FN3435-S.SNP.12:22612072 chr12:022612072 0 W/22612072-22612072 FN3435-S SNP A -> G AC=1;AN=184;BQB=0.999954;DP=2880;DP4=1413,1348,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.0562e-06;MQSB=0.966323;RPB=0.907835;SGB=28.7043;VDB=0.375317;EFF=INTERGENIC(MODIFIER||||||||||1) FN3427-S.SNP.12:22612746 chr12:022612746 0 W/22612746-22612746 FN3427-S SNP C -> T AC=1;AN=184;BQB=0.781788;DP=2730;DP4=1190,1458,6,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0.0010989;MQB=4.88154e-06;MQSB=0.916285;RPB=0.316186;SGB=35.7479;VDB=0.641758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3599-S.SNP.12:22617570 chr12:022617570 0 W/22617570-22617570 FN3599-S SNP A -> C AC=1;AN=188;BQB=0.998619;DP=2849;DP4=1266,1392,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.29482e-10;MQSB=0.842738;RPB=0.528033;SGB=33.7061;VDB=0.163403;EFF=INTRON(MODIFIER||||218|LOC_Os12g36900|protein_coding|CODING|LOC_Os12g36900.1|2|1) FN753-S.SNP.12:22620700 chr12:022620700 0 W/22620700-22620700 FN753-S Single Base Substitution T-G INTRON HET SNo: 675, Mutant_ID: FN753-S, Generation: M2, Mutations: 58, Genes: 24, Seed availability: Yes. FN778-S.SNP.12:22628590 chr12:022628590 0 W/22628590-22628590 FN778-S Single Base Substitution T-A INTERGENIC HET SNo: 699, Mutant_ID: FN778-S, Generation: M2, Mutations: 76, Genes: 32, Seed availability: Yes. FN4221-S.SNP.12:22629002 chr12:022629002 0 W/22629002-22629002 FN4221-S SNP A -> T AC=1;AN=170;BQB=0.907693;DP=2721;DP4=1213,1261,6,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.18093e-06;MQSB=0.947504;RPB=0.964077;SGB=-17.4322;VDB=0.996789;EFF=START_GAINED(LOW||||576|LOC_Os12g36910|protein_coding|CODING|LOC_Os12g36910.1|1|1),UTR_5_PRIME(MODIFIER||14||576|LOC_Os12g36910|protein_coding|CODING|LOC_Os12g36910.1|1|1) FN_777-2-1.SNP.12:22637253 chr12:022637253 0 W/22637253-22637253 FN_777-2-1 Single Base Substitution G-A Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN941-S.SNP.12:22637637 chr12:022637637 0 W/22637637-22637637 FN941-S Single Base Substitution C-T INTRON HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN2397.SNP.12:22645744 chr12:022645744 0 W/22645744-22645744 FN2397 SNP A -> G AC=1;AN=200;BQB=0.903576;DP=4808;DP4=2612,1911,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.54243e-19;MQSB=0.868303;RPB=0.966879;SGB=97.9523;VDB=0.519551;EFF=INTERGENIC(MODIFIER||||||||||1) W385-6-8-4.SNP.12:22652972 chr12:022652972 0 W/22652972-22652972 W385-6-8-4 Single Base Substitution G-A INTRON HET SNo: 1407, Mutant_ID: W385-6-8-4, Generation: M2, Mutations: 86, Genes: 70, Seed availability: No. FN1002-S.SNP.12:22656871 chr12:022656871 0 W/22656871-22656871 FN1002-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 905, Mutant_ID: FN1002-S, Generation: M2, Mutations: 57, Genes: 27, Seed availability: Yes. FN1205-S.SNP.12:22672242 chr12:022672242 0 W/22672242-22672242 FN1205-S Single Base Substitution G-T INTERGENIC HET SNo: 1036, Mutant_ID: FN1205-S, Generation: M2, Mutations: 48, Genes: 7, Seed availability: Yes. FN1380-S.SNP.12:22679847 chr12:022679847 0 W/22679847-22679847 FN1380-S Single Base Substitution G-T STOP_GAINED HET LOC_Os12g37000 retrotransposon protein, putative, unclassified SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN4081-S.SNP.12:22711118 chr12:022711118 0 W/22711118-22711118 FN4081-S SNP T -> A AC=1;AN=182;BQB=0.999886;DP=2834;DP4=1431,1321,8,11;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.02508e-11;MQSB=0.930982;RPB=0.725787;SGB=80.1982;VDB=0.41198;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atg/Ttg|M196L|214|LOC_Os12g37060|protein_coding|CODING|LOC_Os12g37060.1|3|1) FN589-S.SNP.12:22716223 chr12:022716223 0 W/22716223-22716223 FN589-S Single Base Substitution A-G INTERGENIC HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3527-S.SNP.12:22716863 chr12:022716863 0 W/22716863-22716863 FN3527-S SNP A -> T AC=1;AN=188;BQB=0.998769;DP=2996;DP4=1479,1378,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.49201e-06;MQSB=0.797271;RPB=0.652218;SGB=35.3493;VDB=0.885341;EFF=INTRON(MODIFIER||||140|LOC_Os12g37070|protein_coding|CODING|LOC_Os12g37070.1|1|1) FN3573-S.SNP.12:22718283 chr12:022718283 0 W/22718283-22718283 FN3573-S SNP G -> T AC=1;AN=188;BQB=0.396319;DP=3272;DP4=1790,1328,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.12463e-06;MQSB=0.652953;RPB=0.689553;SGB=32.441;VDB=0.830124;EFF=INTRON(MODIFIER||||140|LOC_Os12g37070|protein_coding|CODING|LOC_Os12g37070.1|1|1) FN3538-S.SNP.12:22721221 chr12:022721221 0 W/22721221-22721221 FN3538-S SNP G -> A AC=1;AN=188;BQB=0.889169;DP=3016;DP4=1455,1500,6,3;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.76759e-05;MQSB=0.995851;RPB=0.0247573;SGB=35.3493;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN525-S.SNP.12:22723359 chr12:022723359 0 W/22723359-22723359 FN525-S Single Base Substitution A-G UTR_3_PRIME HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN2355.SNP.12:22723396 chr12:022723396 0 W/22723396-22723396 FN2355 SNP A -> C AC=1;AN=192;BQB=0.928072;DP=4990;DP4=2350,2259,9,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.03924e-15;MQSB=0.982938;RPB=0.319924;SGB=51.9931;VDB=0.94467;EFF=UTR_3_PRIME(MODIFIER||1280||696|LOC_Os12g37100|protein_coding|CODING|LOC_Os12g37100.1|2|1) FN-387.SNP.12:22725457 chr12:022725457 0 W/22725457-22725457 FN-387 Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g37100 pentatricopeptide repeat domain containing protein, putative, expressed SNo: 373, Mutant_ID: FN-387, Generation: M2, Mutations: 56, Genes: 37, Seed availability: Yes. FN2618-S.SNP.12:22736942 chr12:022736942 0 W/22736942-22736942 FN2618-S SNP C -> T AC=1;AN=198;BQB=0.76408;DP=4249;DP4=1838,2193,7,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.35392e-13;MQSB=0.840925;RPB=0.996093;SGB=79.6954;VDB=0.917233;EFF=INTERGENIC(MODIFIER||||||||||1) FN-50.SNP.12:22737518 chr12:022737518 0 W/22737518-22737518 FN-50 Single Base Substitution A-C INTERGENIC Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN1180-S.SNP.12:22740839 chr12:022740839 0 W/22740839-22740839 FN1180-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN1180-S.SNP.12:22740840 chr12:022740840 0 W/22740840-22740840 FN1180-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN2789-S.SNP.12:22746073 chr12:022746073 0 W/22746073-22746073 FN2789-S SNP G -> C AC=1;AN=198;BQB=0.690444;DP=4183;DP4=1927,2020,13,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000239063;MQB=3.91862e-09;MQSB=0.98242;RPB=0.866054;SGB=37.1297;VDB=0.74324;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.12:22747710 chr12:022747710 0 W/22747710-22747710 FN2645-S SNP T -> C AC=2;AN=200;BQB=0.734011;DP=4818;DP4=2346,2271,17,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=2.12604e-22;MQSB=0.837002;RPB=0.681421;SGB=126.794;VDB=0.596825;EFF=INTERGENIC(MODIFIER||||||||||1) FN1667-S.SNP.12:22748940 chr12:022748940 0 W/22748940-22748940 FN1667-S SNP A -> C AC=1;AN=188;BQB=0.134351;DP=3950;DP4=1938,1971,11,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.2401e-07;MQSB=0.230998;RPB=0.028941;SGB=-38.7347;VDB=0.394349;EFF=INTERGENIC(MODIFIER||||||||||1) FN1320-S.SNP.12:22749059 chr12:022749059 0 W/22749059-22749059 FN1320-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1123, Mutant_ID: FN1320-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN551-S.SNP.12:22749953 chr12:022749953 0 W/22749953-22749953 FN551-S Single Base Substitution C-A INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN2415.SNP.12:22751166 chr12:022751166 0 W/22751166-22751166 FN2415 SNP T -> A AC=2;AN=200;BQB=0.150885;DP=4828;DP4=2505,2002,26,21;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.27451e-28;MQSB=0.707137;RPB=0.811449;SGB=159.24;VDB=0.475403;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V140|306|LOC_Os12g37130|protein_coding|CODING|LOC_Os12g37130.1|3|1) FN2415.SNP.12:22751167 chr12:022751167 0 W/22751167-22751167 FN2415 SNP C -> A AC=2;AN=200;BQB=0.0585989;DP=4831;DP4=2468,2029,31,16;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.15431e-24;MQSB=0.70942;RPB=0.996613;SGB=4.4397;VDB=0.426924;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cct/Act|P141T|306|LOC_Os12g37130|protein_coding|CODING|LOC_Os12g37130.1|3|1) FN2536-S.SNP.12:22755942 chr12:022755942 0 W/22755942-22755942 FN2536-S SNP G -> A AC=2;AN=198;BQB=0.420122;DP=4441;DP4=1941,2168,8,9;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.2407e-10;MQSB=0.998466;RPB=0.491785;SGB=72.5245;VDB=0.211414;EFF=INTERGENIC(MODIFIER||||||||||1) W453-3-1.SNP.12:22761455 chr12:022761455 0 W/22761455-22761455 W453-3-1 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g37140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1415, Mutant_ID: W453-3-1, Generation: M2, Mutations: 68, Genes: 14, Seed availability: Yes. FN1614-S.SNP.12:22764728 chr12:022764728 0 W/22764728-22764728 FN1614-S Single Base Substitution G-T INTRON Homo SNo: 1328, Mutant_ID: FN1614-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN1229-S.SNP.12:22765441 chr12:022765441 0 W/22765441-22765441 FN1229-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g37140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3784-S.SNP.12:22769248 chr12:022769248 0 W/22769248-22769248 FN3784-S SNP T -> C AC=1;AN=190;BQB=0.886164;DP=2666;DP4=1153,1426,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.99672e-09;MQSB=0.673844;RPB=0.954926;SGB=58.2031;VDB=0.521809;EFF=INTERGENIC(MODIFIER||||||||||1) FN928-S.SNP.12:22788234 chr12:022788234 0 W/22788234-22788234 FN928-S Single Base Substitution C-G INTERGENIC HOMO SNo: 834, Mutant_ID: FN928-S, Generation: M2, Mutations: 73, Genes: 81, Seed availability: Yes. FN3708-S.SNP.12:22795085 chr12:022795085 0 W/22795085-22795085 FN3708-S SNP C -> A AC=2;AN=190;BQB=0.873;DP=2928;DP4=1386,1338,10,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.31433e-14;MQSB=0.887203;RPB=0.137483;SGB=22.7576;VDB=0.357253;EFF=INTERGENIC(MODIFIER||||||||||1) FN1550-S.SNP.12:22806205 chr12:022806205 0 W/22806205-22806205 FN1550-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1296, Mutant_ID: FN1550-S, Generation: M2, Mutations: 97, Genes: 22, Seed availability: Yes. FN4312-S.SNP.12:22816542 chr12:022816542 0 W/22816542-22816542 FN4312-S SNP C -> T AC=1;AN=170;BQB=0.94837;DP=2260;DP4=939,1221,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.73425e-05;MQSB=0.931193;RPB=0.94746;SGB=34.5445;VDB=0.561963;EFF=INTRON(MODIFIER||||559|LOC_Os12g37200|protein_coding|CODING|LOC_Os12g37200.1|4|1) FN510-S.SNP.12:22818368 chr12:022818368 0 W/22818368-22818368 FN510-S Single Base Substitution A-T INTRON HOMO SNo: 508, Mutant_ID: FN510-S, Generation: M2, Mutations: 67, Genes: 18, Seed availability: Yes. FN3580-S.SNP.12:22827443 chr12:022827443 0 W/22827443-22827443 FN3580-S SNP C -> A AC=1;AN=188;BQB=0.993699;DP=2833;DP4=1258,1503,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.42015e-09;MQSB=0.333983;RPB=0.929655;SGB=76.2387;VDB=0.100982;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A44S|289|LOC_Os12g37210|protein_coding|CODING|LOC_Os12g37210.1|1|1) FN3710-S.SNP.12:22828384 chr12:022828384 0 W/22828384-22828384 FN3710-S SNP A -> G AC=1;AN=190;BQB=0.968902;DP=2938;DP4=1424,1410,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.30475e-07;MQSB=0.973033;RPB=0.0619758;SGB=49.0954;VDB=0.377547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2794-S.SNP.12:22831527 chr12:022831527 0 W/22831527-22831527 FN2794-S SNP C -> T AC=1;AN=198;BQB=0.0859966;DP=4078;DP4=1767,2084,9,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.70186e-05;MQSB=0.98728;RPB=0.72121;SGB=18.9639;VDB=0.601395;EFF=INTERGENIC(MODIFIER||||||||||1) FN910-S.SNP.12:22831884 chr12:022831884 0 W/22831884-22831884 FN910-S Single Base Substitution C-T INTERGENIC HET SNo: 816, Mutant_ID: FN910-S, Generation: M2, Mutations: 89, Genes: 26, Seed availability: Yes. FN898-S.SNP.12:22833967 chr12:022833967 0 W/22833967-22833967 FN898-S Single Base Substitution C-G INTERGENIC HET SNo: 804, Mutant_ID: FN898-S, Generation: M2, Mutations: 104, Genes: 69, Seed availability: Yes. FN750-S.SNP.12:22834241 chr12:022834241 0 W/22834241-22834241 FN750-S Single Base Substitution T-A INTERGENIC HET SNo: 672, Mutant_ID: FN750-S, Generation: M2, Mutations: 45, Genes: 13, Seed availability: Yes. FN3723-S.SNP.12:22844401 chr12:022844401 0 W/22844401-22844401 FN3723-S SNP C -> T AC=1;AN=190;BQB=0.521719;DP=2890;DP4=1445,1359,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0141869;MQB=0.521613;MQSB=0.000197153;RPB=0.470132;SGB=32.5467;VDB=0.652509;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCa/tTa|S655L|1021|LOC_Os12g37240|protein_coding|CODING|LOC_Os12g37240.1|2|1) FN3915-S.SNP.12:22856049 chr12:022856049 0 W/22856049-22856049 FN3915-S SNP T -> C AC=1;AN=158;BQB=0.959054;DP=2510;DP4=1125,1264,2,12;HOB=8.01154e-05;ICB=0.000161245;MQ=42;MQ0F=0.000398406;MQB=0.00321227;MQSB=0;RPB=0.863932;SGB=37.4429;VDB=0.488253;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgA/cgG|R603|922|LOC_Os12g37260|protein_coding|CODING|LOC_Os12g37260.1|7|1) FN1264-S.SNP.12:22858418 chr12:022858418 0 W/22858418-22858418 FN1264-S Single Base Substitution G-A INTRON HET SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN3765-S.SNP.12:22862848 chr12:022862848 0 W/22862848-22862848 FN3765-S SNP C -> T AC=1;AN=190;BQB=0.254986;DP=2324;DP4=1396,838,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.30176e-09;MQSB=0.999687;RPB=0.809859;SGB=53.8699;VDB=0.873594;EFF=INTERGENIC(MODIFIER||||||||||1) FN1547-S.SNP.12:22863377 chr12:022863377 0 W/22863377-22863377 FN1547-S Single Base Substitution C-T INTERGENIC HET SNo: 1294, Mutant_ID: FN1547-S, Generation: M2, Mutations: 75, Genes: 64, Seed availability: Yes. FN3599-S.SNP.12:22867847 chr12:022867847 0 W/22867847-22867847 FN3599-S SNP T -> C AC=1;AN=188;BQB=0.997066;DP=2679;DP4=1376,1226,15,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.31548e-12;MQSB=0.974447;RPB=0.167489;SGB=38.7926;VDB=0.650014;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I511V|632|LOC_Os12g37270|protein_coding|CODING|LOC_Os12g37270.1|4|1) FN596-S.SNP.12:22870414 chr12:022870414 0 W/22870414-22870414 FN596-S Single Base Substitution G-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN596-S.SNP.12:22870415 chr12:022870415 0 W/22870415-22870415 FN596-S Single Base Substitution C-A INTERGENIC HET SNo: 579, Mutant_ID: FN596-S, Generation: M2, Mutations: 56, Genes: 209, Seed availability: Yes. FN3820-S.SNP.12:22882568 chr12:022882568 0 W/22882568-22882568 FN3820-S SNP G -> T AC=2;AN=190;BQB=0.797111;DP=2586;DP4=1277,1184,15,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=3.67371e-15;MQSB=0.942997;RPB=0.971085;SGB=89.4087;VDB=0.842068;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|agC/agA|S436R|558|LOC_Os12g37290|protein_coding|CODING|LOC_Os12g37290.1|2|1) FN2083-S.SNP.12:22896337 chr12:022896337 0 W/22896337-22896337 FN2083-S SNP C -> T AC=1;AN=168;BQB=0.189575;DP=3503;DP4=1666,1605,139,58;HOB=7.08617e-05;ICB=0.000142567;MQ=32;MQ0F=0.117043;MQB=0;MQSB=4.35969e-30;RPB=0.320891;SGB=-2205.65;VDB=1.28641e-13;EFF=SYNONYMOUS_CODING(LOW|SILENT|tgC/tgT|C1018|1453|LOC_Os12g37300|protein_coding|CODING|LOC_Os12g37300.1|5|1) FN3552-S.SNP.12:22896614 chr12:022896614 0 W/22896614-22896614 FN3552-S SNP A -> G AC=2;AN=188;BQB=0.99963;DP=3199;DP4=1443,1656,16,21;HOB=0.0210502;ICB=0.494738;MQ=48;MQ0F=0.00281338;MQB=1.49812e-16;MQSB=0.258985;RPB=0.999863;SGB=121.023;VDB=0.454196;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Atc/Gtc|I1111V|1453|LOC_Os12g37300|protein_coding|CODING|LOC_Os12g37300.1|5|1) FN1713-S.SNP.12:22896969 chr12:022896969 0 W/22896969-22896969 FN1713-S SNP G -> A AC=1;AN=188;BQB=0.176907;DP=2249;DP4=1052,1159,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.67436e-06;MQSB=0.984327;RPB=0.727543;SGB=50.1574;VDB=0.972384;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGt/cAt|R1229H|1453|LOC_Os12g37300|protein_coding|CODING|LOC_Os12g37300.1|5|1) FN2617-S.SNP.12:22898712 chr12:022898712 0 W/22898712-22898712 FN2617-S SNP C -> T AC=1;AN=198;BQB=0.901832;DP=3470;DP4=1749,1535,12,9;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0.0158501;MQB=0.000504238;MQSB=0.990833;RPB=0.893216;SGB=90.9049;VDB=0.587919;EFF=INTERGENIC(MODIFIER||||||||||1) FN3900-S.SNP.12:22901867 chr12:022901867 0 W/22901867-22901867 FN3900-S SNP C -> T AC=2;AN=158;BQB=0.876766;DP=2689;DP4=1195,1360,12,24;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.45055e-19;MQSB=0.408021;RPB=0.786276;SGB=151.934;VDB=0.334005;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.12:22902035 chr12:022902035 0 W/22902035-22902035 FN561-S Single Base Substitution C-A INTERGENIC HET SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN-159.SNP.12:22902207 chr12:022902207 0 W/22902207-22902207 FN-159 Single Base Substitution C-G INTERGENIC HET SNo: 159, Mutant_ID: FN-159, Generation: M2, Mutations: 48, Genes: 57, Seed availability: Yes. W607-2-1.SNP.12:22906042 chr12:022906042 0 W/22906042-22906042 W607-2-1 Single Base Substitution C-G INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN429-S.SNP.12:22908954 chr12:022908954 0 W/22908954-22908954 FN429-S Single Base Substitution A-T INTERGENIC HET SNo: 428, Mutant_ID: FN429-S, Generation: M2, Mutations: 85, Genes: 24, Seed availability: Yes. FN2606-S.SNP.12:22910332 chr12:022910332 0 W/22910332-22910332 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.895554;DP=4166;DP4=1935,2036,5,6;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.0300048;MQB=1.82165e-05;MQSB=0.00227719;RPB=0.600826;SGB=-17.4065;VDB=0.678651;EFF=INTERGENIC(MODIFIER||||||||||1) FN1274-S.SNP.12:22915621 chr12:022915621 0 W/22915621-22915621 FN1274-S Single Base Substitution G-A INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN444-S.SNP.12:22916353 chr12:022916353 0 W/22916353-22916353 FN444-S Single Base Substitution C-T INTERGENIC HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN752-S.SNP.12:22916999 chr12:022916999 0 W/22916999-22916999 FN752-S Single Base Substitution G-A INTERGENIC HET SNo: 674, Mutant_ID: FN752-S, Generation: M2, Mutations: 55, Genes: 32, Seed availability: Yes. FN2376.SNP.12:22920562 chr12:022920562 0 W/22920562-22920562 FN2376 SNP T -> A AC=1;AN=192;BQB=0.823088;DP=4952;DP4=2510,2274,4,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.73775e-06;MQSB=0.987077;RPB=0.632749;SGB=35.5177;VDB=0.743634;EFF=INTRON(MODIFIER||||358|LOC_Os12g37320|protein_coding|CODING|LOC_Os12g37320.1|1|1),INTRON(MODIFIER||||346|LOC_Os12g37320|protein_coding|CODING|LOC_Os12g37320.2|1|1) FN3437-S.SNP.12:22926480 chr12:022926480 0 W/22926480-22926480 FN3437-S SNP G -> A AC=1;AN=184;BQB=0.997322;DP=3591;DP4=1560,1907,7,10;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0197717;MQB=0.000367995;MQSB=2.0952e-11;RPB=0.545926;SGB=49.835;VDB=0.774388;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P451|812|LOC_Os12g37330|protein_coding|CODING|LOC_Os12g37330.1|4|1) FN2120-S.SNP.12:22928420 chr12:022928420 0 W/22928420-22928420 FN2120-S SNP G -> A AC=1;AN=168;BQB=0.0818784;DP=3919;DP4=2144,1689,23,12;HOB=7.08617e-05;ICB=0.000142567;MQ=28;MQ0F=0.180403;MQB=0.25433;MQSB=0;RPB=0.612688;SGB=-205.173;VDB=0.813982;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R1911*|1991|LOC_Os12g37340|protein_coding|CODING|LOC_Os12g37340.1|3|1) FN1203-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN1203-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN1234-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN1234-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1059, Mutant_ID: FN1234-S, Generation: M2, Mutations: 60, Genes: 26, Seed availability: Yes. FN1468-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN1468-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1236, Mutant_ID: FN1468-S, Generation: M2, Mutations: 88, Genes: 30, Seed availability: Yes. FN1669-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN1669-S SNP C -> T AC=1;AN=188;BQB=0.521975;DP=2898;DP4=1430,1416,6,10;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.123188;MQB=0.98943;MQSB=0.000130659;RPB=0.461154;SGB=5.5382;VDB=0.00838325;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1411T|1991|LOC_Os12g37340|protein_coding|CODING|LOC_Os12g37340.1|3|1) FN2607-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN2607-S SNP C -> T AC=1;AN=198;BQB=0.803759;DP=4353;DP4=2127,1958,4,7;HOB=5.10152e-05;ICB=0.000102546;MQ=42;MQ0F=0.0220538;MQB=0.019124;MQSB=0.146551;RPB=0.338391;SGB=44.9538;VDB=0.204138;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1411T|1991|LOC_Os12g37340|protein_coding|CODING|LOC_Os12g37340.1|3|1) FN3095-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN3095-S SNP C -> T AC=1;AN=184;BQB=0.731092;DP=3979;DP4=1827,2037,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.0344308;MQB=0.106646;MQSB=0.000216856;RPB=0.590843;SGB=74.4875;VDB=0.621073;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1411T|1991|LOC_Os12g37340|protein_coding|CODING|LOC_Os12g37340.1|3|1) FN3455-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN3455-S SNP C -> T AC=1;AN=184;BQB=0.839341;DP=4000;DP4=1848,2041,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=40;MQ0F=0.03525;MQB=0.216998;MQSB=0.0719643;RPB=0.9995;SGB=45.9712;VDB=0.778732;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcg/Acg|A1411T|1991|LOC_Os12g37340|protein_coding|CODING|LOC_Os12g37340.1|3|1) FN702-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN702-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 631, Mutant_ID: FN702-S, Generation: M2, Mutations: 79, Genes: 50, Seed availability: Yes. FN809-S.SNP.12:22929920 chr12:022929920 0 W/22929920-22929920 FN809-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN3803-S.SNP.12:22935543 chr12:022935543 0 W/22935543-22935543 FN3803-S SNP G -> A AC=1;AN=190;BQB=0.645726;DP=2825;DP4=1520,1225,12,1;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.000353982;MQB=0.00155849;MQSB=0;RPB=0.259631;SGB=53.6492;VDB=0.904475;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R132|450|LOC_Os12g37350|protein_coding|CODING|LOC_Os12g37350.1|3|1) FN-379.SNP.12:22937489 chr12:022937489 0 W/22937489-22937489 FN-379 Single Base Substitution C-T INTERGENIC HET SNo: 367, Mutant_ID: FN-379, Generation: M2, Mutations: 39, Genes: 44, Seed availability: Yes. FN1217-S.SNP.12:22938089 chr12:022938089 0 W/22938089-22938089 FN1217-S Single Base Substitution C-A INTERGENIC HET SNo: 1046, Mutant_ID: FN1217-S, Generation: M2, Mutations: 101, Genes: 43, Seed availability: Yes. FN1396-S.SNP.12:22945448 chr12:022945448 0 W/22945448-22945448 FN1396-S Single Base Substitution C-T INTERGENIC HET SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2130-S.SNP.12:22945710 chr12:022945710 0 W/22945710-22945710 FN2130-S SNP G -> C AC=1;AN=168;BQB=0.822531;DP=3995;DP4=2138,1811,9,15;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.09757e-10;MQSB=0.98834;RPB=0.955108;SGB=-12.7876;VDB=0.107004;EFF=INTERGENIC(MODIFIER||||||||||1) FN413-S.SNP.12:22945981 chr12:022945981 0 W/22945981-22945981 FN413-S Single Base Substitution G-T INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN413-S.SNP.12:22945982 chr12:022945982 0 W/22945982-22945982 FN413-S Single Base Substitution A-T INTERGENIC HOMO SNo: 412, Mutant_ID: FN413-S, Generation: M2, Mutations: 49, Genes: 13, Seed availability: Yes. FN3440-S.SNP.12:22963573 chr12:022963573 0 W/22963573-22963573 FN3440-S SNP G -> T AC=1;AN=184;BQB=0.99614;DP=2873;DP4=1636,1142,14,7;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=8.13679e-09;MQSB=0.00527589;RPB=0.506797;SGB=89.4385;VDB=0.631023;EFF=INTERGENIC(MODIFIER||||||||||1) FN402-S.SNP.12:22966974 chr12:022966974 0 W/22966974-22966974 FN402-S Single Base Substitution A-T INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN754-S.SNP.12:22977528 chr12:022977528 0 W/22977528-22977528 FN754-S Single Base Substitution T-A INTERGENIC HET SNo: 676, Mutant_ID: FN754-S, Generation: M2, Mutations: 47, Genes: 5, Seed availability: Yes. FN2562-S.SNP.12:22985686 chr12:022985686 0 W/22985686-22985686 FN2562-S SNP G -> A AC=1;AN=198;BQB=0.268318;DP=3311;DP4=1546,1550,12,10;HOB=5.10152e-05;ICB=0.000102546;MQ=38;MQ0F=0.0368469;MQB=0.969399;MQSB=2.94612e-10;RPB=0.876862;SGB=15.7299;VDB=0.280929;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggg/Agg|G350R|1037|LOC_Os12g37450|protein_coding|CODING|LOC_Os12g37450.1|1|1) FN1506-S.SNP.12:22997301 chr12:022997301 0 W/22997301-22997301 FN1506-S Single Base Substitution C-T STOP_GAINED HET LOC_Os12g37470 conserved hypothetical protein SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN1514-S.SNP.12:22997301 chr12:022997301 0 W/22997301-22997301 FN1514-S Single Base Substitution C-T STOP_GAINED HET LOC_Os12g37470 conserved hypothetical protein SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4181-S.SNP.12:23002353 chr12:023002353 0 W/23002353-23002353 FN4181-S SNP G -> A AC=2;AN=170;BQB=0.74352;DP=2264;DP4=1054,1107,17,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.60646e-14;MQSB=0.181102;RPB=0.430573;SGB=100.288;VDB=0.776839;EFF=INTRON(MODIFIER||||356|LOC_Os12g37490|protein_coding|CODING|LOC_Os12g37490.1|2|1) FN3343-S.SNP.12:23004471 chr12:023004471 0 W/23004471-23004471 FN3343-S SNP T -> C AC=2;AN=184;BQB=0.913481;DP=3042;DP4=1220,1686,21,19;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.55158e-21;MQSB=0.947375;RPB=0.474338;SGB=175.352;VDB=0.777522;EFF=INTERGENIC(MODIFIER||||||||||1) FN1278-S.SNP.12:23011274 chr12:023011274 0 W/23011274-23011274 FN1278-S Single Base Substitution T-C INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN2619-S.SNP.12:23018117 chr12:023018117 0 W/23018117-23018117 FN2619-S SNP T -> C AC=1;AN=198;BQB=0.992535;DP=4348;DP4=1997,2007,23,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.22308e-18;MQSB=0.821742;RPB=0.903703;SGB=89.0321;VDB=0.947985;EFF=INTERGENIC(MODIFIER||||||||||1) FN-350.SNP.12:23018948 chr12:023018948 0 W/23018948-23018948 FN-350 Single Base Substitution G-A INTERGENIC HET SNo: 341, Mutant_ID: FN-350, Generation: M2, Mutations: 63, Genes: 103, Seed availability: Yes. FN4154-S.SNP.12:23018948 chr12:023018948 0 W/23018948-23018948 FN4154-S SNP G -> A AC=1;AN=170;BQB=0.998579;DP=2203;DP4=987,1157,2,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.61315e-05;MQSB=0.988458;RPB=0.978131;SGB=25.6601;VDB=0.372161;EFF=INTERGENIC(MODIFIER||||||||||1) FN3417-S.SNP.12:23020175 chr12:023020175 0 W/23020175-23020175 FN3417-S SNP T -> C AC=1;AN=184;BQB=0.944642;DP=2531;DP4=1525,956,4,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83903e-06;MQSB=0.168913;RPB=0.609455;SGB=32.2261;VDB=0.00119429;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.12:23020542 chr12:023020542 0 W/23020542-23020542 FN3785-S SNP A -> T AC=1;AN=190;BQB=0.901496;DP=2785;DP4=1169,1539,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.21545e-06;MQSB=0.941847;RPB=0.951929;SGB=21.8853;VDB=0.515403;EFF=INTERGENIC(MODIFIER||||||||||1) FN3785-S.SNP.12:23020543 chr12:023020543 0 W/23020543-23020543 FN3785-S SNP A -> T AC=1;AN=190;BQB=0.765927;DP=2793;DP4=1120,1525,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.30653e-06;MQSB=0.96379;RPB=0.940839;SGB=10.8904;VDB=0.512083;EFF=INTERGENIC(MODIFIER||||||||||1) FN3721-S.SNP.12:23026887 chr12:023026887 0 W/23026887-23026887 FN3721-S SNP C -> T AC=1;AN=190;BQB=0.857932;DP=2931;DP4=1502,1311,8,7;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0.00034118;MQB=9.13593e-07;MQSB=0.691796;RPB=0.721198;SGB=23.6597;VDB=0.861425;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S107L|117|LOC_Os12g37519|protein_coding|CODING|LOC_Os12g37519.1|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCg/tTg|S107L|145|LOC_Os12g37519|protein_coding|CODING|LOC_Os12g37519.2|2|1) FN1299-S.SNP.12:23029151 chr12:023029151 0 W/23029151-23029151 FN1299-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1108, Mutant_ID: FN1299-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN2418.SNP.12:23033266 chr12:023033266 0 W/23033266-23033266 FN2418 SNP T -> A AC=1;AN=200;BQB=0.961731;DP=5019;DP4=2448,2345,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.00425e-09;MQSB=0.99149;RPB=0.497803;SGB=63.4749;VDB=0.737392;EFF=INTRON(MODIFIER||||589|LOC_Os12g37530|protein_coding|CODING|LOC_Os12g37530.1|6|1|WARNING_TRANSCRIPT_INCOMPLETE),INTRON(MODIFIER||||591|LOC_Os12g37530|protein_coding|CODING|LOC_Os12g37530.2|6|1),INTRON(MODIFIER||||542|LOC_Os12g37530|protein_coding|CODING|LOC_Os12g37530.3|6|1) FN2496.SNP.12:23052992 chr12:023052992 0 W/23052992-23052992 FN2496 SNP C -> T AC=1;AN=200;BQB=0.0897915;DP=4143;DP4=1928,2002,13,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.92332e-12;MQSB=0.940145;RPB=0.881503;SGB=34.6953;VDB=0.834608;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G564|590|LOC_Os12g37560|protein_coding|CODING|LOC_Os12g37560.1|8|1),UTR_3_PRIME(MODIFIER||304||496|LOC_Os12g37560|protein_coding|CODING|LOC_Os12g37560.2|7|1) FN540-S.SNP.12:23055316 chr12:023055316 0 W/23055316-23055316 FN540-S Single Base Substitution C-G INTRON HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN4150-S.SNP.12:23059861 chr12:023059861 0 W/23059861-23059861 FN4150-S SNP G -> A AC=1;AN=170;BQB=0.923002;DP=2444;DP4=1005,1310,11,5;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.91757e-08;MQSB=0.731944;RPB=0.0129851;SGB=65.6427;VDB=0.215289;EFF=INTERGENIC(MODIFIER||||||||||1) FN825-S.SNP.12:23063167 chr12:023063167 0 W/23063167-23063167 FN825-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g37570 protein kinase family protein, putative, expressed SNo: 740, Mutant_ID: FN825-S, Generation: M2, Mutations: 63, Genes: 18, Seed availability: Yes. FN-70.SNP.12:23063558 chr12:023063558 0 W/23063558-23063558 FN-70 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g37570 protein kinase family protein, putative, expressed SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN449-S.SNP.12:23066089 chr12:023066089 0 W/23066089-23066089 FN449-S Single Base Substitution T-C INTRON HET SNo: 448, Mutant_ID: FN449-S, Generation: M2, Mutations: 65, Genes: 143, Seed availability: Yes. FN810-S.SNP.12:23083752 chr12:023083752 0 W/23083752-23083752 FN810-S Single Base Substitution C-T INTRON HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN3479-S.SNP.12:23089165 chr12:023089165 0 W/23089165-23089165 FN3479-S SNP A -> G AC=1;AN=184;BQB=0.853639;DP=2800;DP4=1288,1406,7,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.82904e-07;MQSB=0.998879;RPB=0.373275;SGB=62.3078;VDB=0.524758;EFF=INTERGENIC(MODIFIER||||||||||1) FN3840-S.SNP.12:23091325 chr12:023091325 0 W/23091325-23091325 FN3840-S SNP C -> A AC=1;AN=190;BQB=0.971906;DP=2522;DP4=1054,1357,3,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.92781e-06;MQSB=0.588454;RPB=0.443257;SGB=35.4339;VDB=0.0966519;EFF=INTERGENIC(MODIFIER||||||||||1) FN485-S.SNP.12:23092726 chr12:023092726 0 W/23092726-23092726 FN485-S Single Base Substitution A-T INTRON HET SNo: 483, Mutant_ID: FN485-S, Generation: M2, Mutations: 65, Genes: 23, Seed availability: Yes. FN3465-S.SNP.12:23094333 chr12:023094333 0 W/23094333-23094333 FN3465-S SNP C -> T AC=1;AN=184;BQB=0.305296;DP=3439;DP4=1797,1521,5,17;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.02934e-08;MQSB=0.091586;RPB=0.990753;SGB=67.4439;VDB=0.921158;EFF=INTERGENIC(MODIFIER||||||||||1) FN1737-S.SNP.12:23096761 chr12:023096761 0 W/23096761-23096761 FN1737-S SNP A -> T AC=2;AN=188;BQB=0.672419;DP=3768;DP4=1878,1824,22,23;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.55619e-20;MQSB=0.985147;RPB=0.640615;SGB=-48.7822;VDB=0.396057;EFF=INTERGENIC(MODIFIER||||||||||1) FN1282-S.SNP.12:23102114 chr12:023102114 0 W/23102114-23102114 FN1282-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 1096, Mutant_ID: FN1282-S, Generation: M2, Mutations: 80, Genes: 12, Seed availability: Yes. FN2492.SNP.12:23106179 chr12:023106179 0 W/23106179-23106179 FN2492 SNP T -> A AC=1;AN=200;BQB=0.985367;DP=4210;DP4=2144,1640,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.00023753;MQB=4.18169e-05;MQSB=0.87862;RPB=0.701815;SGB=36.6644;VDB=0.747745;EFF=UTR_5_PRIME(MODIFIER||32||495|LOC_Os12g37640|protein_coding|CODING|LOC_Os12g37640.1|1|1),UTR_5_PRIME(MODIFIER||32||420|LOC_Os12g37640|protein_coding|CODING|LOC_Os12g37640.2|1|1),UTR_5_PRIME(MODIFIER||32||430|LOC_Os12g37640|protein_coding|CODING|LOC_Os12g37640.3|1|1),UTR_5_PRIME(MODIFIER||2118||403|LOC_Os12g37640|protein_coding|CODING|LOC_Os12g37640.4|1|1) FN809-S.SNP.12:23120495 chr12:023120495 0 W/23120495-23120495 FN809-S Single Base Substitution A-T INTRON HOMO SNo: 727, Mutant_ID: FN809-S, Generation: M2, Mutations: 50, Genes: 13, Seed availability: Yes. FN2659-S.SNP.12:23121146 chr12:023121146 0 W/23121146-23121146 FN2659-S SNP T -> A AC=1;AN=200;BQB=0.988485;DP=4985;DP4=2018,2641,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99271e-15;MQSB=0.62755;RPB=0.417367;SGB=104.921;VDB=0.318088;EFF=INTRON(MODIFIER||||414|LOC_Os12g37660|protein_coding|CODING|LOC_Os12g37660.1|2|1) FN2465.SNP.12:23124129 chr12:023124129 0 W/23124129-23124129 FN2465 SNP A -> T AC=1;AN=200;BQB=0.814228;DP=4053;DP4=2001,1603,7,10;HOB=5e-05;ICB=0.0001005;MQ=30;MQ0F=0.112263;MQB=0.00638862;MQSB=0;RPB=0.98088;SGB=7.88476;VDB=0.329102;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.12:23126469 chr12:023126469 0 W/23126469-23126469 FN2435 SNP G -> T AC=1;AN=200;BQB=0.867525;DP=5319;DP4=2442,2610,12,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.77823e-14;MQSB=0.443349;RPB=0.105057;SGB=50.3263;VDB=0.0642873;EFF=INTERGENIC(MODIFIER||||||||||1) FN4184-S.SNP.12:23129762 chr12:023129762 0 W/23129762-23129762 FN4184-S SNP A -> G AC=2;AN=170;BQB=0.695149;DP=2555;DP4=923,1371,17,20;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.02888e-20;MQSB=0.983649;RPB=0.940627;SGB=117.502;VDB=0.275297;EFF=INTERGENIC(MODIFIER||||||||||1) FN483-S.SNP.12:23138528 chr12:023138528 0 W/23138528-23138528 FN483-S Single Base Substitution A-C INTERGENIC HET SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN2560-S.SNP.12:23144794 chr12:023144794 0 W/23144794-23144794 FN2560-S SNP C -> T AC=1;AN=198;BQB=0.385118;DP=3697;DP4=1643,1861,5,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.07882e-08;MQSB=0.735092;RPB=0.522326;SGB=-14.4309;VDB=0.654918;EFF=INTERGENIC(MODIFIER||||||||||1) FN589-S.SNP.12:23151762 chr12:023151762 0 W/23151762-23151762 FN589-S Single Base Substitution T-C INTRON HET SNo: 574, Mutant_ID: FN589-S, Generation: M2, Mutations: 65, Genes: 19, Seed availability: Yes. FN3990-S.SNP.12:23152528 chr12:023152528 0 W/23152528-23152528 FN3990-S SNP C -> T AC=2;AN=168;BQB=0.988886;DP=2649;DP4=1295,1234,26,22;HOB=0.0235261;ICB=0.494119;MQ=48;MQ0F=0;MQB=1.66433e-19;MQSB=0.0219913;RPB=0.921861;SGB=145.052;VDB=0.904027;EFF=INTRON(MODIFIER||||249|LOC_Os12g37710|protein_coding|CODING|LOC_Os12g37710.1|1|1),INTRON(MODIFIER||||143|LOC_Os12g37710|protein_coding|CODING|LOC_Os12g37710.2|1|1) FN724-S.SNP.12:23153650 chr12:023153650 0 W/23153650-23153650 FN724-S Single Base Substitution C-T INTRON HET SNo: 649, Mutant_ID: FN724-S, Generation: M2, Mutations: 72, Genes: 29, Seed availability: Yes. FN1395-S.SNP.12:23156969 chr12:023156969 0 W/23156969-23156969 FN1395-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1176, Mutant_ID: FN1395-S, Generation: M2, Mutations: 32, Genes: 3, Seed availability: Yes. FN1660-S.SNP.12:23163029 chr12:023163029 0 W/23163029-23163029 FN1660-S Single Base Substitution A-G INTRON HET SNo: 1360, Mutant_ID: FN1660-S, Generation: M2, Mutations: 90, Genes: 30, Seed availability: Yes. FN1382-S.SNP.12:23171254 chr12:023171254 0 W/23171254-23171254 FN1382-S Single Base Substitution A-G INTRON HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN1396-S.SNP.12:23171758 chr12:023171758 0 W/23171758-23171758 FN1396-S Single Base Substitution G-A UTR_5_PRIME HOMO SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN1396-S.SNP.12:23171764 chr12:023171764 0 W/23171764-23171764 FN1396-S Single Base Substitution C-A START_GAINED HOMO LOC_Os12g37740 resistance protein LR10, putative, expressed SNo: 1177, Mutant_ID: FN1396-S, Generation: M2, Mutations: 61, Genes: 60, Seed availability: Yes. FN2283.SNP.12:23178514 chr12:023178514 0 W/23178514-23178514 FN2283 SNP T -> C AC=1;AN=192;BQB=0.946889;DP=4893;DP4=2355,2067,20,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.58843e-16;MQSB=0.995243;RPB=0.501764;SGB=27.6913;VDB=0.0387871;EFF=INTERGENIC(MODIFIER||||||||||1) FN2281.SNP.12:23184530 chr12:023184530 0 W/23184530-23184530 FN2281 SNP T -> A AC=1;AN=192;BQB=0.993182;DP=5405;DP4=2477,2626,17,18;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.67737e-21;MQSB=0.995051;RPB=0.791237;SGB=114.631;VDB=0.908265;EFF=INTRON(MODIFIER||||700|LOC_Os12g37760|protein_coding|CODING|LOC_Os12g37760.1|1|1) FN1119-S.SNP.12:23195182 chr12:023195182 0 W/23195182-23195182 FN1119-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g37770 RGH1A, putative, expressed SNo: 991, Mutant_ID: FN1119-S, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN4044-S.SNP.12:23198348 chr12:023198348 0 W/23198348-23198348 FN4044-S SNP C -> T AC=2;AN=168;BQB=0.945697;DP=2562;DP4=1255,1194,13,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.53263e-16;MQSB=0.98782;RPB=0.786715;SGB=140.789;VDB=0.243869;EFF=SYNONYMOUS_CODING(LOW|SILENT|agG/agA|R359|726|LOC_Os12g37780|protein_coding|CODING|LOC_Os12g37780.1|3|1) FN2080-S.SNP.12:23202663 chr12:023202663 0 W/23202663-23202663 FN2080-S SNP C -> T AC=1;AN=168;BQB=0.147444;DP=4244;DP4=2079,2115,17,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.34033e-17;MQSB=0.999625;RPB=0.360422;SGB=-126.323;VDB=0.494903;EFF=INTERGENIC(MODIFIER||||||||||1) FN1466-S.SNP.12:23202868 chr12:023202868 0 W/23202868-23202868 FN1466-S Single Base Substitution G-A INTERGENIC HET SNo: 1234, Mutant_ID: FN1466-S, Generation: M2, Mutations: 82, Genes: 45, Seed availability: Yes. FN2461.SNP.12:23203341 chr12:023203341 0 W/23203341-23203341 FN2461 SNP T -> A AC=1;AN=200;BQB=0.810516;DP=5112;DP4=2282,2564,22,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43159e-20;MQSB=0.908704;RPB=0.599799;SGB=115.978;VDB=0.140466;EFF=INTERGENIC(MODIFIER||||||||||1) FN2353.SNP.12:23203756 chr12:023203756 0 W/23203756-23203756 FN2353 SNP T -> A AC=1;AN=192;BQB=0.166872;DP=5432;DP4=2583,2554,10,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000184094;MQB=1.39149e-12;MQSB=0.835834;RPB=0.995228;SGB=85.7252;VDB=0.636253;EFF=INTERGENIC(MODIFIER||||||||||1) FN2788-S.SNP.12:23204788 chr12:023204788 0 W/23204788-23204788 FN2788-S SNP C -> T AC=1;AN=198;BQB=0.981238;DP=3833;DP4=1839,1814,12,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000260892;MQB=8.84952e-09;MQSB=0.988304;RPB=0.338696;SGB=37.1297;VDB=0.432065;EFF=INTERGENIC(MODIFIER||||||||||1) FN1724-S.SNP.12:23212170 chr12:023212170 0 W/23212170-23212170 FN1724-S SNP A -> T AC=1;AN=188;BQB=0.721072;DP=2872;DP4=1181,1644,5,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.17352e-07;MQSB=0.986732;RPB=0.985741;SGB=5.5382;VDB=0.725062;EFF=INTERGENIC(MODIFIER||||||||||1) FN1231-S.SNP.12:23216663 chr12:023216663 0 W/23216663-23216663 FN1231-S Single Base Substitution T-G SYNONYMOUS_CODING HOMO SNo: 1056, Mutant_ID: FN1231-S, Generation: M2, Mutations: 57, Genes: 23, Seed availability: Yes. W313-1-1-1-1.SNP.12:23216919 chr12:023216919 0 W/23216919-23216919 W313-1-1-1-1 Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN2691-S.SNP.12:23217907 chr12:023217907 0 W/23217907-23217907 FN2691-S SNP T -> A AC=1;AN=200;BQB=0.999955;DP=4308;DP4=2120,1813,7,3;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0336583;MQB=0.998796;MQSB=1.10683e-17;RPB=0.273426;SGB=25.849;VDB=0.379326;EFF=INTRON(MODIFIER||||1606|LOC_Os12g37810|protein_coding|CODING|LOC_Os12g37810.1|7|1) FN4096-S.SNP.12:23228604 chr12:023228604 0 W/23228604-23228604 FN4096-S SNP G -> A AC=1;AN=182;BQB=0.786827;DP=2812;DP4=1359,1384,8,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.6917e-08;MQSB=0.844212;RPB=0.294188;SGB=35.6277;VDB=0.966365;EFF=INTERGENIC(MODIFIER||||||||||1) FN1118-S.SNP.12:23230333 chr12:023230333 0 W/23230333-23230333 FN1118-S Single Base Substitution T-C INTERGENIC HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN3425-S.SNP.12:23234712 chr12:023234712 0 W/23234712-23234712 FN3425-S SNP A -> T AC=1;AN=184;BQB=0.929454;DP=2451;DP4=944,1306,3,6;HOB=5.90737e-05;ICB=0.00011879;MQ=32;MQ0F=0.105671;MQB=0.810883;MQSB=0;RPB=0.971394;SGB=35.1773;VDB=0.135572;EFF=INTRON(MODIFIER||||879|LOC_Os12g37830|protein_coding|CODING|LOC_Os12g37830.1|2|1) FN1120-S.SNP.12:23241046 chr12:023241046 0 W/23241046-23241046 FN1120-S Single Base Substitution A-T INTERGENIC HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2388.SNP.12:23244173 chr12:023244173 0 W/23244173-23244173 FN2388 SNP C -> T AC=1;AN=200;BQB=0.729412;DP=4542;DP4=2185,2055,9,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.81423e-18;MQSB=0.88284;RPB=0.752008;SGB=127.947;VDB=0.166042;EFF=INTERGENIC(MODIFIER||||||||||1) FN3383-S.SNP.12:23252414 chr12:023252414 0 W/23252414-23252414 FN3383-S SNP T -> C AC=1;AN=184;BQB=0.882543;DP=2636;DP4=1260,1201,9,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17032e-11;MQSB=0.95059;RPB=0.470871;SGB=35.884;VDB=0.0264823;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F572L|711|LOC_Os12g37840|protein_coding|CODING|LOC_Os12g37840.1|11|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ttc/Ctc|F572L|637|LOC_Os12g37840|protein_coding|CODING|LOC_Os12g37840.2|11|1) FN3844-S.SNP.12:23254108 chr12:023254108 0 W/23254108-23254108 FN3844-S SNP T -> C AC=1;AN=190;BQB=0.945893;DP=2656;DP4=1342,1222,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000362111;MQSB=0.726312;RPB=0.51854;SGB=18.3316;VDB=0.318702;EFF=INTERGENIC(MODIFIER||||||||||1) FN747-S.SNP.12:23267005 chr12:023267005 0 W/23267005-23267005 FN747-S Single Base Substitution G-A INTRON HET SNo: 670, Mutant_ID: FN747-S, Generation: M2, Mutations: 75, Genes: 30, Seed availability: Yes. FN1011-S.SNP.12:23269661 chr12:023269661 0 W/23269661-23269661 FN1011-S Single Base Substitution C-T INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1011-S.SNP.12:23269662 chr12:023269662 0 W/23269662-23269662 FN1011-S Single Base Substitution G-T INTRON HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN1655-S.SNP.12:23269745 chr12:023269745 0 W/23269745-23269745 FN1655-S Single Base Substitution T-C INTRON HET SNo: 1357, Mutant_ID: FN1655-S, Generation: M2, Mutations: 84, Genes: 34, Seed availability: No. FN3714-S.SNP.12:23275427 chr12:023275427 0 W/23275427-23275427 FN3714-S SNP C -> G AC=2;AN=190;BQB=0.976676;DP=1732;DP4=457,1158,14,17;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.05099e-17;MQSB=0.658136;RPB=0.999999;SGB=110.694;VDB=0.782204;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaC/gaG|D26E|423|LOC_Os12g37870|protein_coding|CODING|LOC_Os12g37870.1|1|1) FN4312-S.SNP.12:23280852 chr12:023280852 0 W/23280852-23280852 FN4312-S SNP A -> T AC=1;AN=170;BQB=0.835589;DP=2621;DP4=1424,1093,10,7;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.55908e-11;MQSB=0.791895;RPB=0.98464;SGB=48.6486;VDB=0.246622;EFF=INTRON(MODIFIER||||106|LOC_Os12g37880|protein_coding|CODING|LOC_Os12g37880.1|2|1) FN876-S.SNP.12:23294185 chr12:023294185 0 W/23294185-23294185 FN876-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 782, Mutant_ID: FN876-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2492.SNP.12:23300437 chr12:023300437 0 W/23300437-23300437 FN2492 SNP T -> G AC=1;AN=200;BQB=0.682981;DP=4824;DP4=2207,2046,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.29359e-09;MQSB=0.543422;RPB=0.890914;SGB=-38.4742;VDB=0.58376;EFF=INTERGENIC(MODIFIER||||||||||1) FN1708-S.SNP.12:23305993 chr12:023305993 0 W/23305993-23305993 FN1708-S SNP C -> T AC=1;AN=188;BQB=0.978227;DP=1985;DP4=830,1108,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=7.19125e-07;MQSB=0.996803;RPB=0.987534;SGB=15.903;VDB=0.297748;EFF=INTRON(MODIFIER||||389|LOC_Os12g37920|protein_coding|CODING|LOC_Os12g37920.1|1|1) FN1708-S.SNP.12:23305998 chr12:023305998 0 W/23305998-23305998 FN1708-S SNP T -> C AC=1;AN=188;BQB=0.860531;DP=1979;DP4=831,1091,7,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.73966e-06;MQSB=0.995194;RPB=0.837627;SGB=32.441;VDB=0.898189;EFF=INTRON(MODIFIER||||389|LOC_Os12g37920|protein_coding|CODING|LOC_Os12g37920.1|1|1) FN3559-S.SNP.12:23308386 chr12:023308386 0 W/23308386-23308386 FN3559-S SNP A -> G AC=1;AN=188;BQB=0.998078;DP=2676;DP4=1233,1362,2,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.85856e-07;MQSB=0.997506;RPB=0.329592;SGB=35.9843;VDB=0.805027;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTc/tCc|F432S|450|LOC_Os12g37939|protein_coding|CODING|LOC_Os12g37939.1|10|1) FN2658-S.SNP.12:23312383 chr12:023312383 0 W/23312383-23312383 FN2658-S SNP C -> T AC=1;AN=200;BQB=0.637893;DP=4447;DP4=2136,1972,4,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.62219e-07;MQSB=0.996721;RPB=0.551911;SGB=29.4541;VDB=0.329216;EFF=INTRON(MODIFIER||||450|LOC_Os12g37939|protein_coding|CODING|LOC_Os12g37939.1|2|1) FN2563-S.SNP.12:23326292 chr12:023326292 0 W/23326292-23326292 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.997501;DP=4429;DP4=1973,2226,4,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000225785;MQB=9.76858e-07;MQSB=0.999992;RPB=0.989433;SGB=32.9588;VDB=0.504569;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A112V|242|LOC_Os12g37970|protein_coding|CODING|LOC_Os12g37970.1|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A47V|177|LOC_Os12g37970|protein_coding|CODING|LOC_Os12g37970.2|3|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCa/gTa|A47V|177|LOC_Os12g37970|protein_coding|CODING|LOC_Os12g37970.3|2|1) FN654-S.SNP.12:23332475 chr12:023332475 0 W/23332475-23332475 FN654-S Single Base Substitution C-A INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2166-S.SNP.12:23335812 chr12:023335812 0 W/23335812-23335812 FN2166-S SNP C -> T AC=1;AN=168;BQB=3.46512e-07;DP=4010;DP4=2145,1815,16,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.56227e-07;MQSB=0.979021;RPB=0.700314;SGB=-264.315;VDB=0.275648;EFF=INTERGENIC(MODIFIER||||||||||1) FN518-S.SNP.12:23349659 chr12:023349659 0 W/23349659-23349659 FN518-S Single Base Substitution C-T INTERGENIC HET SNo: 516, Mutant_ID: FN518-S, Generation: M2, Mutations: 37, Genes: 19, Seed availability: Yes. FN914-S.SNP.12:23353027 chr12:023353027 0 W/23353027-23353027 FN914-S Single Base Substitution G-T INTRON HET SNo: 820, Mutant_ID: FN914-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. FN1197-S.SNP.12:23358815 chr12:023358815 0 W/23358815-23358815 FN1197-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g38020 retrotransposon protein, putative, unclassified, expressed SNo: 1030, Mutant_ID: FN1197-S, Generation: M2, Mutations: 68, Genes: 24, Seed availability: Yes. FN2574-S.SNP.12:23385766 chr12:023385766 0 W/23385766-23385766 FN2574-S SNP A -> G AC=2;AN=188;BQB=0.589473;DP=3831;DP4=1795,1554,11,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.84543e-09;MQSB=0.959098;RPB=0.208518;SGB=9.3494;VDB=0.0650137;EFF=INTRON(MODIFIER||||79|LOC_Os12g38051|protein_coding|CODING|LOC_Os12g38051.1|1|1) FN1301-S.SNP.12:23385770 chr12:023385770 0 W/23385770-23385770 FN1301-S Single Base Substitution T-A INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN3687-S.SNP.12:23387439 chr12:023387439 0 W/23387439-23387439 FN3687-S SNP T -> A AC=2;AN=190;BQB=0.817241;DP=2332;DP4=1062,1147,14,9;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.67654e-10;MQSB=0.640634;RPB=0.0501318;SGB=71.6393;VDB=0.109993;EFF=INTRON(MODIFIER||||79|LOC_Os12g38051|protein_coding|CODING|LOC_Os12g38051.1|1|1) FN2271-S.SNP.12:23389362 chr12:023389362 0 W/23389362-23389362 FN2271-S SNP T -> C AC=2;AN=190;BQB=0.929332;DP=4309;DP4=2150,1784,23,20;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=1.91773e-21;MQSB=0.759001;RPB=0.998513;SGB=95.1683;VDB=0.28556;EFF=INTRON(MODIFIER||||79|LOC_Os12g38051|protein_coding|CODING|LOC_Os12g38051.1|1|1) FN2408.SNP.12:23393576 chr12:023393576 0 W/23393576-23393576 FN2408 SNP C -> T AC=1;AN=200;BQB=0.801171;DP=4513;DP4=2367,1866,8,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.64698e-08;MQSB=0.599334;RPB=0.0716624;SGB=36.6644;VDB=0.147748;EFF=INTERGENIC(MODIFIER||||||||||1) FN1271-S.SNP.12:23396146 chr12:023396146 0 W/23396146-23396146 FN1271-S Single Base Substitution T-C INTERGENIC HOMO SNo: 1085, Mutant_ID: FN1271-S, Generation: M2, Mutations: 53, Genes: 27, Seed availability: Yes. FN-285.SNP.12:23398587 chr12:023398587 0 W/23398587-23398587 FN-285 Single Base Substitution T-A INTERGENIC HET SNo: 281, Mutant_ID: FN-285, Generation: M2, Mutations: 89, Genes: 30, Seed availability: Yes. FN2494.SNP.12:23403821 chr12:023403821 0 W/23403821-23403821 FN2494 SNP C -> A AC=1;AN=200;BQB=0.109464;DP=5239;DP4=2469,2422,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.14568e-11;MQSB=0.504193;RPB=0.946714;SGB=-36.8949;VDB=0.7392;EFF=INTRON(MODIFIER||||872|LOC_Os12g38110|protein_coding|CODING|LOC_Os12g38110.1|1|1) W470-2-1.SNP.12:23406393 chr12:023406393 0 W/23406393-23406393 W470-2-1 Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 1419, Mutant_ID: W470-2-1, Generation: M2, Mutations: 78, Genes: 14, Seed availability: Yes. FN-362.SNP.12:23416057 chr12:023416057 0 W/23416057-23416057 FN-362 Single Base Substitution T-C INTERGENIC HOMO SNo: 351, Mutant_ID: FN-362, Generation: M2, Mutations: 72, Genes: 235, Seed availability: Yes. FN2531-S.SNP.12:23417069 chr12:023417069 0 W/23417069-23417069 FN2531-S SNP C -> A AC=1;AN=198;BQB=0.999985;DP=4248;DP4=1948,2045,6,5;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.30686e-06;MQSB=0.566439;RPB=0.950777;SGB=29.3637;VDB=0.614683;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.12:23418688 chr12:023418688 0 W/23418688-23418688 FN2454 SNP C -> T AC=1;AN=200;BQB=0.00230888;DP=3841;DP4=2051,1613,5,9;HOB=5e-05;ICB=0.0001005;MQ=43;MQ0F=0.000520698;MQB=0.035265;MQSB=1.22144e-29;RPB=0.0209878;SGB=40.2696;VDB=0.0469434;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ccc/Tcc|P60S|82|LOC_Os12g38130|protein_coding|CODING|LOC_Os12g38130.1|1|1) FN-61.SNP.12:23425290 chr12:023425290 0 W/23425290-23425290 FN-61 Single Base Substitution T-C INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN2407.SNP.12:23425329 chr12:023425329 0 W/23425329-23425329 FN2407 SNP T -> A AC=1;AN=200;BQB=0.770786;DP=5018;DP4=2223,2507,12,20;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.20054e-17;MQSB=0.981829;RPB=0.800655;SGB=-77.8382;VDB=0.406803;EFF=INTERGENIC(MODIFIER||||||||||1) FN-341.SNP.12:23434516 chr12:023434516 0 W/23434516-23434516 FN-341 Single Base Substitution T-C INTERGENIC HOMO SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN347-S.SNP.12:23437937 chr12:023437937 0 W/23437937-23437937 FN347-S Single Base Substitution C-T INTERGENIC HET SNo: 338, Mutant_ID: FN347-S, Generation: M2, Mutations: 63, Genes: 148, Seed availability: Yes. FN1669-S.SNP.12:23443526 chr12:023443526 0 W/23443526-23443526 FN1669-S SNP G -> T AC=1;AN=188;BQB=0.176335;DP=3692;DP4=1817,1839,9,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.30037e-06;MQSB=0.957089;RPB=0.22006;SGB=-13.9132;VDB=0.0394266;EFF=UTR_5_PRIME(MODIFIER||2392||215|LOC_Os12g38180|protein_coding|CODING|LOC_Os12g38180.1|1|1) FN821-S.SNP.12:23444231 chr12:023444231 0 W/23444231-23444231 FN821-S Single Base Substitution G-A UTR_5_PRIME HET SNo: 738, Mutant_ID: FN821-S, Generation: M2, Mutations: 48, Genes: 23, Seed availability: Yes. FN1015-S.SNP.12:23446097 chr12:023446097 0 W/23446097-23446097 FN1015-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN3845-S.SNP.12:23451397 chr12:023451397 0 W/23451397-23451397 FN3845-S SNP G -> T AC=1;AN=190;BQB=0.999999;DP=2495;DP4=1025,1408,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00440882;MQB=0.491882;MQSB=0.728154;RPB=0.251371;SGB=49.0954;VDB=0.781161;EFF=INTERGENIC(MODIFIER||||||||||1) FN1494-S.SNP.12:23460323 chr12:023460323 0 W/23460323-23460323 FN1494-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g38200 dof zinc finger domain containing protein, putative, expressed SNo: 1255, Mutant_ID: FN1494-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN1480-S.SNP.12:23471511 chr12:023471511 0 W/23471511-23471511 FN1480-S Single Base Substitution C-T INTRON Homo SNo: 1244, Mutant_ID: FN1480-S, Generation: M2, Mutations: 97, Genes: 25, Seed availability: Yes. FN3365-S.SNP.12:23475883 chr12:023475883 0 W/23475883-23475883 FN3365-S SNP G -> A AC=1;AN=184;BQB=0.358658;DP=2891;DP4=1546,1226,15,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.2566e-13;MQSB=0.970624;RPB=0.151313;SGB=18.9766;VDB=0.236654;EFF=INTERGENIC(MODIFIER||||||||||1) FN4304-S.SNP.12:23476527 chr12:023476527 0 W/23476527-23476527 FN4304-S SNP G -> A AC=1;AN=170;BQB=0.989775;DP=2635;DP4=1315,1254,11,3;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0;MQB=6.34535e-08;MQSB=0.949693;RPB=0.324721;SGB=38.3207;VDB=0.21862;EFF=INTERGENIC(MODIFIER||||||||||1) W463-2-1.SNP.12:23480169 chr12:023480169 0 W/23480169-23480169 W463-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1416, Mutant_ID: W463-2-1, Generation: M2, Mutations: 76, Genes: 61, Seed availability: Yes. FN677-S.SNP.12:23501865 chr12:023501865 0 W/23501865-23501865 FN677-S Single Base Substitution T-G SYNONYMOUS_CODING HET SNo: 610, Mutant_ID: FN677-S, Generation: M2, Mutations: 50, Genes: 7, Seed availability: Yes. FN941-S.SNP.12:23512677 chr12:023512677 0 W/23512677-23512677 FN941-S Single Base Substitution C-T INTRON HET SNo: 847, Mutant_ID: FN941-S, Generation: M2, Mutations: 73, Genes: 53, Seed availability: Yes. FN1058-S.SNP.12:23514800 chr12:023514800 0 W/23514800-23514800 FN1058-S Single Base Substitution G-A INTERGENIC HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN1448-S.SNP.12:23515330 chr12:023515330 0 W/23515330-23515330 FN1448-S Single Base Substitution T-C INTRON HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN2631-S.SNP.12:23524789 chr12:023524789 0 W/23524789-23524789 FN2631-S SNP G -> C AC=1;AN=200;BQB=0.998695;DP=4168;DP4=2009,1969,6,8;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000319109;MQSB=0.000879554;RPB=0.997402;SGB=21.6694;VDB=0.529691;EFF=UTR_3_PRIME(MODIFIER||156||123|LOC_Os12g38330|protein_coding|CODING|LOC_Os12g38330.1|1|1) FN1113-S.SNP.12:23527390 chr12:023527390 0 W/23527390-23527390 FN1113-S Single Base Substitution A-G INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN1113-S.SNP.12:23527392 chr12:023527392 0 W/23527392-23527392 FN1113-S Single Base Substitution A-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN-303.SNP.12:23530097 chr12:023530097 0 W/23530097-23530097 FN-303 Single Base Substitution T-A INTERGENIC HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN1086-S.SNP.12:23536198 chr12:023536198 0 W/23536198-23536198 FN1086-S Single Base Substitution G-A INTERGENIC HOMO SNo: 969, Mutant_ID: FN1086-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2606-S.SNP.12:23536198 chr12:023536198 0 W/23536198-23536198 FN2606-S SNP G -> A AC=1;AN=198;BQB=0.93806;DP=4049;DP4=2085,1770,4,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.02051e-05;MQSB=0.662347;RPB=0.944718;SGB=26.5745;VDB=0.76204;EFF=INTERGENIC(MODIFIER||||||||||1) FN2687-S.SNP.12:23541166 chr12:023541166 0 W/23541166-23541166 FN2687-S SNP C -> A AC=1;AN=200;BQB=0.0298786;DP=4750;DP4=2121,2353,9,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.49313e-07;MQSB=0.789732;RPB=0.732834;SGB=4.67442;VDB=0.909864;EFF=INTERGENIC(MODIFIER||||||||||1) FN2678-S.SNP.12:23544294 chr12:023544294 0 W/23544294-23544294 FN2678-S SNP A -> T AC=1;AN=200;BQB=0.651145;DP=4210;DP4=1611,2467,3,7;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000507177;MQSB=8.28189e-31;RPB=0.901676;SGB=25.849;VDB=0.193383;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.12:23544543 chr12:023544543 0 W/23544543-23544543 FN1224-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN3916-S.SNP.12:23544543 chr12:023544543 0 W/23544543-23544543 FN3916-S SNP C -> A AC=1;AN=158;BQB=0.986649;DP=2745;DP4=1342,1280,12,7;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=1.38786e-06;MQSB=0.00212159;RPB=0.392402;SGB=30.927;VDB=0.383486;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.12:23544543 chr12:023544543 0 W/23544543-23544543 FN579-S Single Base Substitution C-A INTERGENIC HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. FN1108-S.SNP.12:23544788 chr12:023544788 0 W/23544788-23544788 FN1108-S Single Base Substitution G-A INTERGENIC HOMO SNo: 981, Mutant_ID: FN1108-S, Generation: M2, Mutations: 81, Genes: 6, Seed availability: Yes. FN2210-S.SNP.12:23549495 chr12:023549495 0 W/23549495-23549495 FN2210-S SNP C -> G AC=1;AN=190;BQB=0.593376;DP=4765;DP4=2102,2378,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.79032e-06;MQSB=0.609734;RPB=0.845533;SGB=25.439;VDB=0.376037;EFF=INTRON(MODIFIER||||731|LOC_Os12g38380|protein_coding|CODING|LOC_Os12g38380.1|11|1) FN1239-S.SNP.12:23557149 chr12:023557149 0 W/23557149-23557149 FN1239-S Single Base Substitution A-T INTRON HOMO SNo: 1062, Mutant_ID: FN1239-S, Generation: M2, Mutations: 62, Genes: 14, Seed availability: Yes. FN3493-S.SNP.12:23572256 chr12:023572256 0 W/23572256-23572256 FN3493-S SNP C -> A AC=1;AN=184;BQB=0.286565;DP=2419;DP4=1001,1339,7,14;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=1.13037e-05;MQSB=0.579019;RPB=0.965551;SGB=12.8895;VDB=0.733163;EFF=INTERGENIC(MODIFIER||||||||||1) FN886-S.SNP.12:23593232 chr12:023593232 0 W/23593232-23593232 FN886-S Single Base Substitution G-A INTRON HET SNo: 792, Mutant_ID: FN886-S, Generation: M2, Mutations: 71, Genes: 12, Seed availability: Yes. FN540-S.SNP.12:23601066 chr12:023601066 0 W/23601066-23601066 FN540-S Single Base Substitution T-C INTERGENIC HET SNo: 536, Mutant_ID: FN540-S, Generation: M2, Mutations: 64, Genes: 104, Seed availability: Yes. FN-308.SNP.12:23604133 chr12:023604133 0 W/23604133-23604133 FN-308 Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g38450 exostosin family domain containing protein, expressed SNo: 303, Mutant_ID: FN-308, Generation: M2, Mutations: 41, Genes: 32, Seed availability: Yes. FN4165-S.SNP.12:23605810 chr12:023605810 0 W/23605810-23605810 FN4165-S SNP T -> C AC=1;AN=170;BQB=0.951712;DP=2413;DP4=1228,1126,8,6;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.217e-08;MQSB=0.969021;RPB=0.909034;SGB=56.7575;VDB=0.9974;EFF=INTERGENIC(MODIFIER||||||||||1) FN773-S.SNP.12:23624801 chr12:023624801 0 W/23624801-23624801 FN773-S Single Base Substitution G-C INTERGENIC HET SNo: 694, Mutant_ID: FN773-S, Generation: M2, Mutations: 50, Genes: 15, Seed availability: Yes. FN3710-S.SNP.12:23625965 chr12:023625965 0 W/23625965-23625965 FN3710-S SNP A -> G AC=1;AN=190;BQB=0.906846;DP=2860;DP4=1361,1404,2,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.80824e-05;MQSB=0.976734;RPB=0.725642;SGB=30.8803;VDB=0.966939;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.12:23626467 chr12:023626467 0 W/23626467-23626467 FN1423-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3445-S.SNP.12:23632690 chr12:023632690 0 W/23632690-23632690 FN3445-S SNP G -> A AC=1;AN=184;BQB=0.999179;DP=2489;DP4=1221,1182,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.86042e-07;MQSB=0.947889;RPB=0.918671;SGB=44.2207;VDB=0.0377809;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.12:23638909 chr12:023638909 0 W/23638909-23638909 FN_N1-151-7 Single Base Substitution T-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN2583-S.SNP.12:23657294 chr12:023657294 0 W/23657294-23657294 FN2583-S SNP C -> A AC=1;AN=200;BQB=0.519079;DP=4327;DP4=2211,1891,11,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.15149e-09;MQSB=0.931239;RPB=0.791773;SGB=54.6902;VDB=0.597532;EFF=INTERGENIC(MODIFIER||||||||||1) FN1015-S.SNP.12:23659558 chr12:023659558 0 W/23659558-23659558 FN1015-S Single Base Substitution C-G INTERGENIC HET SNo: 914, Mutant_ID: FN1015-S, Generation: M2, Mutations: 67, Genes: 112, Seed availability: Yes. FN1716-S.SNP.12:23663360 chr12:023663360 0 W/23663360-23663360 FN1716-S SNP G -> T AC=2;AN=188;BQB=0.138703;DP=2374;DP4=1148,1170,15,3;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=2.49456e-10;MQSB=0.806716;RPB=0.00569584;SGB=-36.4511;VDB=0.00976085;EFF=INTERGENIC(MODIFIER||||||||||1) FN-273.SNP.12:23672100 chr12:023672100 0 W/23672100-23672100 FN-273 Single Base Substitution A-G INTRON HOMO SNo: 270, Mutant_ID: FN-273, Generation: M2, Mutations: 68, Genes: 131, Seed availability: Yes. FN_N1-116-1.SNP.12:23683244 chr12:023683244 0 W/23683244-23683244 FN_N1-116-1 Single Base Substitution C-T Homo SNo: 1374, Mutant_ID: FN_N1-116-1, Generation: M3, Mutations: 51, Genes: 14, Seed availability: Yes. FN1543-S.SNP.12:23687727 chr12:023687727 0 W/23687727-23687727 FN1543-S Single Base Substitution C-T UTR_3_PRIME HET SNo: 1291, Mutant_ID: FN1543-S, Generation: M2, Mutations: 72, Genes: 24, Seed availability: Yes. FN1120-S.SNP.12:23688094 chr12:023688094 0 W/23688094-23688094 FN1120-S Single Base Substitution A-T INTRON HET SNo: 992, Mutant_ID: FN1120-S, Generation: M2, Mutations: 54, Genes: 44, Seed availability: Yes. FN2214-S.SNP.12:23690591 chr12:023690591 0 W/23690591-23690591 FN2214-S SNP G -> T AC=1;AN=190;BQB=0.0748173;DP=3102;DP4=1298,1489,11,9;HOB=5.54017e-05;ICB=0.000111386;MQ=48;MQ0F=0;MQB=4.56449e-07;MQSB=0.965973;RPB=0.192986;SGB=85.5263;VDB=0.821864;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ctg/Atg|L142M|594|LOC_Os12g38570|protein_coding|CODING|LOC_Os12g38570.1|2|1) FN-60.SNP.12:23700208 chr12:023700208 0 W/23700208-23700208 FN-60 Single Base Substitution T-A INTERGENIC HET SNo: 60, Mutant_ID: FN-60, Generation: M2, Mutations: 32, Genes: 110, Seed availability: No. FN3947-S.SNP.12:23702165 chr12:023702165 0 W/23702165-23702165 FN3947-S SNP T -> C AC=1;AN=168;BQB=0.901635;DP=2538;DP4=1192,1166,11,11;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=3.15053e-08;MQSB=0.366041;RPB=0.960869;SGB=92.0501;VDB=0.341793;EFF=INTERGENIC(MODIFIER||||||||||1) FN3652-S.SNP.12:23716672 chr12:023716672 0 W/23716672-23716672 FN3652-S SNP A -> T AC=1;AN=190;BQB=0.299528;DP=2206;DP4=1424,678,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00374721;MQSB=4.29584e-08;RPB=0.824842;SGB=32.5467;VDB=0.415179;EFF=INTERGENIC(MODIFIER||||||||||1) FN3567-S.SNP.12:23729760 chr12:023729760 0 W/23729760-23729760 FN3567-S SNP G -> C AC=1;AN=188;BQB=0.799115;DP=3044;DP4=1072,1880,9,12;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.8815e-12;MQSB=0.313642;RPB=0.405147;SGB=89.8686;VDB=0.629279;EFF=UTR_5_PRIME(MODIFIER||421||366|LOC_Os12g38620|protein_coding|CODING|LOC_Os12g38620.1|1|1),UTR_5_PRIME(MODIFIER||421||366|LOC_Os12g38620|protein_coding|CODING|LOC_Os12g38620.2|1|1),UTR_5_PRIME(MODIFIER||421||366|LOC_Os12g38620|protein_coding|CODING|LOC_Os12g38620.3|1|1) FN3574-S.SNP.12:23733068 chr12:023733068 0 W/23733068-23733068 FN3574-S SNP C -> G AC=2;AN=188;BQB=0.776003;DP=2793;DP4=1508,1197,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.90033e-20;MQSB=0.990521;RPB=0.991636;SGB=139.845;VDB=0.935984;EFF=INTRON(MODIFIER||||659|LOC_Os12g38630|protein_coding|CODING|LOC_Os12g38630.1|6|1) FN2619-S.SNP.12:23737023 chr12:023737023 0 W/23737023-23737023 FN2619-S SNP C -> A AC=1;AN=198;BQB=0.969356;DP=4239;DP4=2097,1890,21,16;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.23791e-22;MQSB=0.996849;RPB=0.956699;SGB=122.837;VDB=0.757048;EFF=INTERGENIC(MODIFIER||||||||||1) FN-240.SNP.12:23768261 chr12:023768261 0 W/23768261-23768261 FN-240 Single Base Substitution T-A INTERGENIC HET SNo: 239, Mutant_ID: FN-240, Generation: M2, Mutations: 48, Genes: 16, Seed availability: Yes. FN2444.SNP.12:23768261 chr12:023768261 0 W/23768261-23768261 FN2444 SNP T -> A AC=1;AN=200;BQB=0.870192;DP=10750;DP4=5480,4529,17,31;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.0183256;MQB=0.0255392;MQSB=7.85974e-06;RPB=0.820726;SGB=-205.356;VDB=0.835381;EFF=INTERGENIC(MODIFIER||||||||||1) FN784-S.SNP.12:23768261 chr12:023768261 0 W/23768261-23768261 FN784-S Single Base Substitution T-A INTERGENIC HET SNo: 705, Mutant_ID: FN784-S, Generation: M2, Mutations: 43, Genes: 157, Seed availability: Yes. FN3459-S.SNP.12:23770926 chr12:023770926 0 W/23770926-23770926 FN3459-S SNP G -> A AC=1;AN=184;BQB=0.997725;DP=6033;DP4=3179,2639,18,11;HOB=5.90737e-05;ICB=0.00011879;MQ=45;MQ0F=0.00314935;MQB=1.61575e-08;MQSB=0.921091;RPB=0.998329;SGB=-8.45255;VDB=0.630065;EFF=INTERGENIC(MODIFIER||||||||||1) FN3484-S.SNP.12:23773355 chr12:023773355 0 W/23773355-23773355 FN3484-S SNP T -> G AC=1;AN=184;BQB=0.613427;DP=6176;DP4=2887,3058,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0;MQB=0.000139051;MQSB=0.779934;RPB=0.526145;SGB=33.3622;VDB=0.848956;EFF=INTERGENIC(MODIFIER||||||||||1) FN2088-S.SNP.12:23773748 chr12:023773748 0 W/23773748-23773748 FN2088-S SNP A -> T AC=1;AN=168;BQB=0.164574;DP=6896;DP4=4284,2566,13,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.000145012;MQB=2.45854e-07;MQSB=0.0111749;RPB=0.984968;SGB=-92.9238;VDB=0.887577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3743-S.SNP.12:23775060 chr12:023775060 0 W/23775060-23775060 FN3743-S SNP G -> A AC=1;AN=190;BQB=0.931621;DP=6620;DP4=3767,2553,20,14;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.120997;MQB=0.876851;MQSB=0;RPB=0.735537;SGB=110.732;VDB=0.330659;EFF=INTERGENIC(MODIFIER||||||||||1) FN1642-S.SNP.12:23779255 chr12:023779255 0 W/23779255-23779255 FN1642-S Single Base Substitution G-A INTERGENIC HET SNo: 1347, Mutant_ID: FN1642-S, Generation: M2, Mutations: 68, Genes: 21, Seed availability: Yes. FN-108.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN-108 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 108, Mutant_ID: FN-108, Generation: M2, Mutations: 41, Genes: 56, Seed availability: Yes. FN-305.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN-305 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 300, Mutant_ID: FN-305, Generation: M2, Mutations: 70, Genes: 103, Seed availability: Yes. FN-94.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN-94 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 94, Mutant_ID: FN-94, Generation: M2, Mutations: 55, Genes: 9, Seed availability: No. FN1039-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN1039-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 935, Mutant_ID: FN1039-S, Generation: M2, Mutations: 66, Genes: 27, Seed availability: Yes. FN1330-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN1330-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1132, Mutant_ID: FN1330-S, Generation: M2, Mutations: 75, Genes: 16, Seed availability: Yes. FN1460-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN1460-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1228, Mutant_ID: FN1460-S, Generation: M2, Mutations: 95, Genes: 18, Seed availability: Yes. FN2313.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN2313 SNP G -> A AC=1;AN=192;BQB=0.402321;DP=9652;DP4=4637,4428,12,22;HOB=5.42535e-05;ICB=0.000109072;MQ=46;MQ0F=0.00207211;MQB=1.20304e-05;MQSB=2.48401e-18;RPB=0.749253;SGB=33.9487;VDB=0.0438398;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I863|923|LOC_Os12g38710|protein_coding|CODING|LOC_Os12g38710.1|2|1) FN3773-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN3773-S SNP G -> A AC=1;AN=190;BQB=0.56997;DP=5704;DP4=3321,2178,18,7;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.003331;MQB=0.00763114;MQSB=0.833793;RPB=0.980005;SGB=78.7471;VDB=0.786941;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I863|923|LOC_Os12g38710|protein_coding|CODING|LOC_Os12g38710.1|2|1) FN444-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN444-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 443, Mutant_ID: FN444-S, Generation: M2, Mutations: 52, Genes: 25, Seed availability: Yes. FN772-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN772-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 693, Mutant_ID: FN772-S, Generation: M2, Mutations: 87, Genes: 17, Seed availability: Yes. FN974-S.SNP.12:23779575 chr12:023779575 0 W/23779575-23779575 FN974-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 878, Mutant_ID: FN974-S, Generation: M2, Mutations: 56, Genes: 75, Seed availability: Yes. FN2690-S.SNP.12:23779796 chr12:023779796 0 W/23779796-23779796 FN2690-S SNP A -> T AC=1;AN=200;BQB=0.864811;DP=9532;DP4=4492,4624,6,9;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00157365;MQB=0.000159706;MQSB=0.0173946;RPB=0.999177;SGB=43.8747;VDB=0.96562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Tac/Aac|Y790N|923|LOC_Os12g38710|protein_coding|CODING|LOC_Os12g38710.1|2|1) FN3430-S.SNP.12:23780016 chr12:023780016 0 W/23780016-23780016 FN3430-S SNP G -> T AC=1;AN=184;BQB=0.907387;DP=7238;DP4=3466,3610,12,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.03658e-10;MQSB=0.695698;RPB=0.633779;SGB=56.8786;VDB=0.0217877;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atA|I716|923|LOC_Os12g38710|protein_coding|CODING|LOC_Os12g38710.1|2|1) FN2457.SNP.12:23781230 chr12:023781230 0 W/23781230-23781230 FN2457 SNP G -> A AC=1;AN=200;BQB=4.15302e-08;DP=10108;DP4=4341,4767,481,20;HOB=5e-05;ICB=0.0001005;MQ=35;MQ0F=0.0516423;MQB=0;MQSB=2.37495e-22;RPB=0;SGB=-7804.39;VDB=2.44566e-28;EFF=STOP_GAINED(HIGH|NONSENSE|Cga/Tga|R334*|923|LOC_Os12g38710|protein_coding|CODING|LOC_Os12g38710.1|1|1);LOF=(LOC_Os12g38710|LOC_Os12g38710|1|1.00);NMD=(LOC_Os12g38710|LOC_Os12g38710|1|1.00) FN1372-S.SNP.12:23781681 chr12:023781681 0 W/23781681-23781681 FN1372-S Single Base Substitution T-C SYNONYMOUS_CODING HET SNo: 1160, Mutant_ID: FN1372-S, Generation: M2, Mutations: 41, Genes: 28, Seed availability: Yes. FN2555-S.SNP.12:23788294 chr12:023788294 0 W/23788294-23788294 FN2555-S SNP G -> A AC=1;AN=198;BQB=0.917494;DP=4098;DP4=2060,1840,7,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.19342e-09;MQSB=0.912843;RPB=0.429987;SGB=58.7391;VDB=0.13869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1292-S.SNP.12:23792927 chr12:023792927 0 W/23792927-23792927 FN1292-S Single Base Substitution A-G INTERGENIC HET SNo: 1104, Mutant_ID: FN1292-S, Generation: M2, Mutations: 63, Genes: 23, Seed availability: Yes. FN2530-S.SNP.12:23794342 chr12:023794342 0 W/23794342-23794342 FN2530-S SNP T -> A AC=1;AN=198;BQB=0.431291;DP=4397;DP4=1872,2218,10,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.2836e-11;MQSB=0.999173;RPB=0.99839;SGB=31.9395;VDB=0.570312;EFF=UTR_3_PRIME(MODIFIER||115||635|LOC_Os12g38730|protein_coding|CODING|LOC_Os12g38730.1|5|1),UTR_3_PRIME(MODIFIER||115||632|LOC_Os12g38730|protein_coding|CODING|LOC_Os12g38730.2|5|1) FN2388.SNP.12:23802777 chr12:023802777 0 W/23802777-23802777 FN2388 SNP T -> C AC=1;AN=200;BQB=0.741377;DP=4978;DP4=2275,2328,18,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.75177e-19;MQSB=0.952756;RPB=0.0660391;SGB=146.368;VDB=0.767179;EFF=INTRON(MODIFIER||||201|LOC_Os12g38740|protein_coding|CODING|LOC_Os12g38740.1|2|1) FN-187.SNP.12:23804606 chr12:023804606 0 W/23804606-23804606 FN-187 Single Base Substitution C-A INTERGENIC HET SNo: 187, Mutant_ID: FN-187, Generation: M2, Mutations: 66, Genes: 76, Seed availability: Yes. FN-202.SNP.12:23805461 chr12:023805461 0 W/23805461-23805461 FN-202 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN2593-S.SNP.12:23808719 chr12:023808719 0 W/23808719-23808719 FN2593-S SNP C -> A AC=1;AN=198;BQB=0.280372;DP=4279;DP4=1868,2150,23,18;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.82215e-24;MQSB=0.999716;RPB=0.949292;SGB=182.807;VDB=0.250157;EFF=UTR_5_PRIME(MODIFIER||55||607|LOC_Os12g38750|protein_coding|CODING|LOC_Os12g38750.2|1|1),INTRON(MODIFIER||||607|LOC_Os12g38750|protein_coding|CODING|LOC_Os12g38750.1|1|1) FN2577-S.SNP.12:23809322 chr12:023809322 0 W/23809322-23809322 FN2577-S SNP C -> T AC=1;AN=198;BQB=0.799967;DP=4285;DP4=2195,1881,15,3;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.47261e-10;MQSB=0.990807;RPB=0.885553;SGB=54.5295;VDB=0.147984;EFF=INTERGENIC(MODIFIER||||||||||1) FN2454.SNP.12:23811784 chr12:023811784 0 W/23811784-23811784 FN2454 SNP T -> C AC=1;AN=200;BQB=0.924722;DP=4415;DP4=2202,1912,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.4248e-08;MQSB=0.965535;RPB=0.847601;SGB=29.4849;VDB=0.922411;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S375|611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.1|11|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcG|S375|611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.2|10|1) FN-221.SNP.12:23812659 chr12:023812659 0 W/23812659-23812659 FN-221 Single Base Substitution G-A INTRON HET SNo: 220, Mutant_ID: FN-221, Generation: M2, Mutations: 45, Genes: 9, Seed availability: Yes. FN2117-S.SNP.12:23814324 chr12:023814324 0 W/23814324-23814324 FN2117-S SNP C -> A AC=2;AN=168;BQB=0.410912;DP=3582;DP4=1876,1643,16,24;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.58015e-18;MQSB=0.925913;RPB=0.894563;SGB=-139.169;VDB=0.983607;EFF=UTR_5_PRIME(MODIFIER||123||611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.2|1|1),INTRON(MODIFIER||||611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.1|1|1) FN2671-S.SNP.12:23814324 chr12:023814324 0 W/23814324-23814324 FN2671-S SNP C -> A AC=2;AN=200;BQB=0.984674;DP=4934;DP4=2453,2234,12,19;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.99695e-18;MQSB=0.714418;RPB=0.367914;SGB=101.557;VDB=0.582792;EFF=UTR_5_PRIME(MODIFIER||123||611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.2|1|1),INTRON(MODIFIER||||611|LOC_Os12g38760|protein_coding|CODING|LOC_Os12g38760.1|1|1) FN525-S.SNP.12:23814415 chr12:023814415 0 W/23814415-23814415 FN525-S Single Base Substitution T-A INTERGENIC HET SNo: 523, Mutant_ID: FN525-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN-50.SNP.12:23826389 chr12:023826389 0 W/23826389-23826389 FN-50 Single Base Substitution A-T INTRON Homo SNo: 50, Mutant_ID: FN-50, Generation: M2, Mutations: 74, Genes: 80, Seed availability: No. FN497-S.SNP.12:23831875 chr12:023831875 0 W/23831875-23831875 FN497-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g38790 targeting protein for Xklp2 containing protein, expressed SNo: 495, Mutant_ID: FN497-S, Generation: M2, Mutations: 87, Genes: 44, Seed availability: Yes. FN1301-S.SNP.12:23837333 chr12:023837333 0 W/23837333-23837333 FN1301-S Single Base Substitution T-C INTRON HET SNo: 1110, Mutant_ID: FN1301-S, Generation: M2, Mutations: 71, Genes: 13, Seed availability: Yes. FN2665-S.SNP.12:23853668 chr12:023853668 0 W/23853668-23853668 FN2665-S SNP G -> A AC=1;AN=200;BQB=0.7741;DP=5051;DP4=2617,2157,17,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.01872e-21;MQSB=0.995663;RPB=0.828132;SGB=115.978;VDB=0.578487;EFF=INTERGENIC(MODIFIER||||||||||1) FN1481-S.SNP.12:23860292 chr12:023860292 0 W/23860292-23860292 FN1481-S Single Base Substitution C-T INTERGENIC HET SNo: 1245, Mutant_ID: FN1481-S, Generation: M2, Mutations: 101, Genes: 38, Seed availability: Yes. FN1405-S.SNP.12:23860826 chr12:023860826 0 W/23860826-23860826 FN1405-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g38830 expressed protein SNo: 1183, Mutant_ID: FN1405-S, Generation: M2, Mutations: 61, Genes: 28, Seed availability: Yes. FN3387-S.SNP.12:23860872 chr12:023860872 0 W/23860872-23860872 FN3387-S SNP A -> T AC=1;AN=184;BQB=0.751436;DP=2345;DP4=986,1130,7,11;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000426439;MQB=7.20414e-09;MQSB=0.00322069;RPB=0.115887;SGB=8.32411;VDB=0.119845;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gTg|E75V|116|LOC_Os12g38830|protein_coding|CODING|LOC_Os12g38830.1|1|1) FN2756-S.SNP.12:23863604 chr12:023863604 0 W/23863604-23863604 FN2756-S SNP G -> A AC=1;AN=200;BQB=0.181162;DP=5419;DP4=3504,1582,20,7;HOB=5e-05;ICB=0.0001005;MQ=36;MQ0F=0.0808267;MQB=0.519543;MQSB=5.13793e-29;RPB=0.776519;SGB=-102.464;VDB=0.243389;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCt/aTt|T708I|712|LOC_Os12g38840|protein_coding|CODING|LOC_Os12g38840.1|8|1) FN2628-S.SNP.12:23864662 chr12:023864662 0 W/23864662-23864662 FN2628-S SNP T -> A AC=1;AN=200;BQB=0.348877;DP=4821;DP4=2385,2114,14,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.85441e-13;MQSB=0.603703;RPB=0.9543;SGB=95.7111;VDB=0.621917;EFF=INTRON(MODIFIER||||712|LOC_Os12g38840|protein_coding|CODING|LOC_Os12g38840.1|3|1) FN1216-S.SNP.12:23869309 chr12:023869309 0 W/23869309-23869309 FN1216-S Single Base Substitution C-T INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1742-S.SNP.12:23872847 chr12:023872847 0 W/23872847-23872847 FN1742-S SNP G -> T AC=1;AN=188;BQB=0.188739;DP=3778;DP4=1662,2065,6,13;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.85132e-06;MQSB=0.934681;RPB=0.703146;SGB=-60.4458;VDB=0.69327;EFF=INTERGENIC(MODIFIER||||||||||1) FN1410-S.SNP.12:23882110 chr12:023882110 0 W/23882110-23882110 FN1410-S Single Base Substitution G-A INTRON HET SNo: 1187, Mutant_ID: FN1410-S, Generation: M2, Mutations: 70, Genes: 29, Seed availability: Yes. FN2557-S.SNP.12:23896157 chr12:023896157 0 W/23896157-23896157 FN2557-S SNP G -> C AC=2;AN=198;BQB=0.331466;DP=4245;DP4=2059,1938,13,14;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.49401e-13;MQSB=0.99141;RPB=0.888537;SGB=23.7055;VDB=0.616481;EFF=INTRON(MODIFIER||||786|LOC_Os12g38870|protein_coding|CODING|LOC_Os12g38870.1|3|1),INTRON(MODIFIER||||786|LOC_Os12g38870|protein_coding|CODING|LOC_Os12g38870.2|3|1) FN2379.SNP.12:23897730 chr12:023897730 0 W/23897730-23897730 FN2379 SNP C -> T AC=1;AN=192;BQB=0.0453848;DP=5093;DP4=2674,1972,24,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.397e-15;MQSB=0.634347;RPB=0.867075;SGB=-2.91736;VDB=0.0838239;EFF=INTRON(MODIFIER||||786|LOC_Os12g38870|protein_coding|CODING|LOC_Os12g38870.1|1|1),INTRON(MODIFIER||||786|LOC_Os12g38870|protein_coding|CODING|LOC_Os12g38870.2|1|1) FN950-S.SNP.12:23898456 chr12:023898456 0 W/23898456-23898456 FN950-S Single Base Substitution G-A INTERGENIC HET SNo: 856, Mutant_ID: FN950-S, Generation: M2, Mutations: 59, Genes: 17, Seed availability: No. FN-162.SNP.12:23898820 chr12:023898820 0 W/23898820-23898820 FN-162 Single Base Substitution T-A INTERGENIC HET SNo: 162, Mutant_ID: FN-162, Generation: M2, Mutations: 61, Genes: 88, Seed availability: Yes. FN2233-S.SNP.12:23900335 chr12:023900335 0 W/23900335-23900335 FN2233-S SNP T -> A AC=2;AN=190;BQB=0.607042;DP=4527;DP4=1971,2224,16,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=8.43264e-18;MQSB=0.879329;RPB=0.880026;SGB=103.624;VDB=0.697678;EFF=INTERGENIC(MODIFIER||||||||||1) FN2192-S.SNP.12:23900576 chr12:023900576 0 W/23900576-23900576 FN2192-S SNP G -> A AC=1;AN=190;BQB=0.281083;DP=4099;DP4=1148,2646,4,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.71434e-10;MQSB=0.749447;RPB=0.0431914;SGB=11.8805;VDB=0.444327;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.12:23902645 chr12:023902645 0 W/23902645-23902645 FN3525-S SNP C -> A AC=1;AN=188;BQB=0.888659;DP=2520;DP4=1277,1205,2,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.44342e-06;MQSB=0.999516;RPB=0.994749;SGB=21.8113;VDB=0.594468;EFF=INTERGENIC(MODIFIER||||||||||1) FN3579-S.SNP.12:23905921 chr12:023905921 0 W/23905921-23905921 FN3579-S SNP A -> G AC=2;AN=188;BQB=0.995908;DP=2550;DP4=1308,1131,12,13;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=5.7504e-15;MQSB=0.955976;RPB=0.695003;SGB=108.042;VDB=0.501624;EFF=INTERGENIC(MODIFIER||||||||||1) FN2496.SNP.12:23908737 chr12:023908737 0 W/23908737-23908737 FN2496 SNP T -> C AC=1;AN=200;BQB=0.844661;DP=4622;DP4=2265,2104,10,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.42706e-11;MQSB=0.974775;RPB=0.0665408;SGB=104.921;VDB=0.284844;EFF=INTERGENIC(MODIFIER||||||||||1) FN948-S.SNP.12:23908839 chr12:023908839 0 W/23908839-23908839 FN948-S Single Base Substitution C-T INTERGENIC HOMO SNo: 854, Mutant_ID: FN948-S, Generation: M2, Mutations: 48, Genes: 69, Seed availability: Yes. FN2185-S.SNP.12:23918963 chr12:023918963 0 W/23918963-23918963 FN2185-S SNP C -> T AC=1;AN=190;BQB=0.57039;DP=4133;DP4=2245,1639,6,12;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.28197e-09;MQSB=0.435773;RPB=0.765922;SGB=76.4186;VDB=0.0954042;EFF=UTR_5_PRIME(MODIFIER||6||332|LOC_Os12g38900|protein_coding|CODING|LOC_Os12g38900.1|1|1) FN703-S.SNP.12:23921278 chr12:023921278 0 W/23921278-23921278 FN703-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 632, Mutant_ID: FN703-S, Generation: M2, Mutations: 55, Genes: 20, Seed availability: Yes. FN3387-S.SNP.12:23923602 chr12:023923602 0 W/23923602-23923602 FN3387-S SNP T -> A AC=1;AN=184;BQB=0.907413;DP=2697;DP4=1244,1354,8,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.00039763;MQSB=0.954044;RPB=0.137549;SGB=44.2207;VDB=0.892076;EFF=INTERGENIC(MODIFIER||||||||||1) FN1224-S.SNP.12:23924389 chr12:023924389 0 W/23924389-23924389 FN1224-S Single Base Substitution A-T INTERGENIC HET SNo: 1051, Mutant_ID: FN1224-S, Generation: M2, Mutations: 53, Genes: 12, Seed availability: Yes. FN2534-S.SNP.12:23928232 chr12:023928232 0 W/23928232-23928232 FN2534-S SNP G -> T AC=1;AN=198;BQB=0.855669;DP=4227;DP4=2019,1933,8,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.56999e-08;MQSB=0.785636;RPB=0.257845;SGB=63.3342;VDB=0.0402022;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A510|618|LOC_Os12g38910|protein_coding|CODING|LOC_Os12g38910.1|3|1) FN3844-S.SNP.12:23928905 chr12:023928905 0 W/23928905-23928905 FN3844-S SNP T -> A AC=1;AN=190;BQB=0.99232;DP=2883;DP4=1312,1463,10,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.34772e-13;MQSB=0.845335;RPB=0.962258;SGB=18.096;VDB=0.204565;EFF=INTERGENIC(MODIFIER||||||||||1) FN952-S.SNP.12:23931523 chr12:023931523 0 W/23931523-23931523 FN952-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN3766-S.SNP.12:23957594 chr12:023957594 0 W/23957594-23957594 FN3766-S SNP A -> C AC=2;AN=190;BQB=0.966508;DP=3039;DP4=1582,1304,15,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.29298e-15;MQSB=0.823239;RPB=0.419956;SGB=112.85;VDB=0.890974;EFF=INTERGENIC(MODIFIER||||||||||1) FN755-S.SNP.12:23971215 chr12:023971215 0 W/23971215-23971215 FN755-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HOMO LOC_Os12g38980 expressed protein SNo: 677, Mutant_ID: FN755-S, Generation: M2, Mutations: 60, Genes: 18, Seed availability: Yes. FN4230-S.SNP.12:23973350 chr12:023973350 0 W/23973350-23973350 FN4230-S SNP C -> T AC=1;AN=170;BQB=0.55347;DP=1896;DP4=976,863,3,6;HOB=6.92042e-05;ICB=0.000139222;MQ=48;MQ0F=0;MQB=0.00309934;MQSB=0.46448;RPB=0.954838;SGB=34.5445;VDB=0.827164;EFF=INTERGENIC(MODIFIER||||||||||1) W706-3-1.SNP.12:23975646 chr12:023975646 0 W/23975646-23975646 W706-3-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN2333.SNP.12:23978414 chr12:023978414 0 W/23978414-23978414 FN2333 SNP T -> C AC=1;AN=192;BQB=0.934637;DP=4790;DP4=2472,2050,9,11;HOB=5.42535e-05;ICB=0.000109072;MQ=47;MQ0F=0.00125261;MQB=1.93156e-07;MQSB=0.00647019;RPB=0.763226;SGB=36.607;VDB=0.985862;EFF=INTERGENIC(MODIFIER||||||||||1) FN2696-S.SNP.12:23980895 chr12:023980895 0 W/23980895-23980895 FN2696-S SNP C -> G AC=1;AN=200;BQB=0.866936;DP=4760;DP4=2244,2212,11,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.21626e-08;MQSB=0.988468;RPB=0.415544;SGB=51.0851;VDB=0.106949;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A15G|190|LOC_Os12g38990|protein_coding|CODING|LOC_Os12g38990.1|1|1) FN551-S.SNP.12:23983611 chr12:023983611 0 W/23983611-23983611 FN551-S Single Base Substitution C-T INTERGENIC HET SNo: 546, Mutant_ID: FN551-S, Generation: M2, Mutations: 64, Genes: 86, Seed availability: Yes. FN3942-S.SNP.12:23984202 chr12:023984202 0 W/23984202-23984202 FN3942-S SNP C -> T AC=1;AN=168;BQB=0.996709;DP=3047;DP4=1328,1616,7,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.38617e-08;MQSB=0.953937;RPB=0.874739;SGB=41.6096;VDB=0.545637;EFF=INTERGENIC(MODIFIER||||||||||1) FN820-S.SNP.12:23985155 chr12:023985155 0 W/23985155-23985155 FN820-S Single Base Substitution C-T INTERGENIC HOMO SNo: 737, Mutant_ID: FN820-S, Generation: M2, Mutations: 46, Genes: 9, Seed availability: Yes. FN998-S.SNP.12:23987606 chr12:023987606 0 W/23987606-23987606 FN998-S Single Base Substitution C-G INTERGENIC HOMO SNo: 901, Mutant_ID: FN998-S, Generation: M2, Mutations: 49, Genes: 9, Seed availability: Yes. FN2682-S.SNP.12:23989381 chr12:023989381 0 W/23989381-23989381 FN2682-S SNP G -> C AC=1;AN=200;BQB=0.756028;DP=6428;DP4=3016,3108,4,8;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0.00700062;MQB=0.00755948;MQSB=0.86214;RPB=0.49115;SGB=49.6594;VDB=0.122859;EFF=INTERGENIC(MODIFIER||||||||||1) FN1462-S.SNP.12:23994511 chr12:023994511 0 W/23994511-23994511 FN1462-S Single Base Substitution C-T INTRON HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3522-S.SNP.12:24003900 chr12:024003900 0 W/24003900-24003900 FN3522-S SNP G -> A AC=1;AN=188;BQB=0.947589;DP=2579;DP4=1327,1201,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.30167e-05;MQSB=0.997542;RPB=0.429451;SGB=18.2682;VDB=0.683425;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.12:24004331 chr12:024004331 0 W/24004331-24004331 FN3787-S SNP T -> A AC=1;AN=190;BQB=0.999995;DP=2416;DP4=1265,1076,7,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17922e-08;MQSB=0.9154;RPB=0.64034;SGB=49.0954;VDB=0.339808;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.12:24004333 chr12:024004333 0 W/24004333-24004333 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.913301;DP=2416;DP4=1258,1083,6,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.27877e-07;MQSB=0.901019;RPB=0.738025;SGB=44.5415;VDB=0.517147;EFF=INTERGENIC(MODIFIER||||||||||1) FN3787-S.SNP.12:24004338 chr12:024004338 0 W/24004338-24004338 FN3787-S SNP G -> A AC=1;AN=190;BQB=0.666109;DP=2387;DP4=1236,1054,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.21981e-08;MQSB=0.974962;RPB=0.576509;SGB=39.6545;VDB=0.460669;EFF=INTERGENIC(MODIFIER||||||||||1) FN725-S.SNP.12:24011281 chr12:024011281 0 W/24011281-24011281 FN725-S Single Base Substitution A-G INTERGENIC HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. W252-6-1.SNP.12:24017560 chr12:024017560 0 W/24017560-24017560 W252-6-1 Single Base Substitution G-A INTERGENIC HOMO SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN780-S.SNP.12:24018585 chr12:024018585 0 W/24018585-24018585 FN780-S Single Base Substitution A-G INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN938-S.SNP.12:24021823 chr12:024021823 0 W/24021823-24021823 FN938-S Single Base Substitution C-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN2768-S.SNP.12:24031882 chr12:024031882 0 W/24031882-24031882 FN2768-S SNP A -> T AC=2;AN=198;BQB=0.61594;DP=4183;DP4=1890,2038,25,15;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.79802e-23;MQSB=0.886497;RPB=0.979534;SGB=133.622;VDB=0.344626;EFF=INTRON(MODIFIER||||263|LOC_Os12g39070|protein_coding|CODING|LOC_Os12g39070.1|2|1) FN3957-S.SNP.12:24034890 chr12:024034890 0 W/24034890-24034890 FN3957-S SNP G -> A AC=2;AN=168;BQB=0.976661;DP=2539;DP4=1111,1310,12,13;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=5.01505e-14;MQSB=0.997206;RPB=0.89581;SGB=46.4929;VDB=0.253033;EFF=SPLICE_SITE_DONOR(HIGH||||263|LOC_Os12g39070|protein_coding|CODING|LOC_Os12g39070.1|10|1),INTRON(MODIFIER||||263|LOC_Os12g39070|protein_coding|CODING|LOC_Os12g39070.1|10|1);LOF=(LOC_Os12g39070|LOC_Os12g39070|1|1.00) FN1624-S.SNP.12:24043240 chr12:024043240 0 W/24043240-24043240 FN1624-S Single Base Substitution G-A INTERGENIC Homo SNo: 1335, Mutant_ID: FN1624-S, Generation: M2, Mutations: 87, Genes: 34, Seed availability: Yes. FN1686-S.SNP.12:24044074 chr12:024044074 0 W/24044074-24044074 FN1686-S SNP G -> A AC=2;AN=188;BQB=0.208858;DP=1595;DP4=162,1376,0,22;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.55616e-13;MQSB=0.0785423;RPB=0.896542;SGB=67.8739;VDB=0.340764;EFF=INTERGENIC(MODIFIER||||||||||1) FN1265-S.SNP.12:24045276 chr12:024045276 0 W/24045276-24045276 FN1265-S Single Base Substitution A-G UTR_5_PRIME HET SNo: 1080, Mutant_ID: FN1265-S, Generation: M2, Mutations: 68, Genes: 32, Seed availability: Yes. FN2496.SNP.12:24046592 chr12:024046592 0 W/24046592-24046592 FN2496 SNP G -> A AC=1;AN=200;BQB=0.381095;DP=4351;DP4=2084,2042,7,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.25264e-12;MQSB=0.743563;RPB=0.245174;SGB=58.2954;VDB=0.107346;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C265Y|341|LOC_Os12g39090|protein_coding|CODING|LOC_Os12g39090.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tGt/tAt|C265Y|341|LOC_Os12g39090|protein_coding|CODING|LOC_Os12g39090.2|2|1) FN-402.SNP.12:24050169 chr12:024050169 0 W/24050169-24050169 FN-402 Single Base Substitution G-A INTERGENIC HET SNo: 390, Mutant_ID: FN-402, Generation: M2, Mutations: 68, Genes: 22, Seed availability: Yes. FN402-S.SNP.12:24050169 chr12:024050169 0 W/24050169-24050169 FN402-S Single Base Substitution G-A INTERGENIC HET SNo: 391, Mutant_ID: FN402-S, Generation: M2, Mutations: 55, Genes: 6, Seed availability: Yes. FN4138-S.SNP.12:24050169 chr12:024050169 0 W/24050169-24050169 FN4138-S SNP G -> A AC=1;AN=170;BQB=0.895147;DP=2473;DP4=1151,1264,2,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.45775e-07;MQSB=0.962358;RPB=0.631934;SGB=24.5502;VDB=0.209188;EFF=INTERGENIC(MODIFIER||||||||||1) FN-85.SNP.12:24061906 chr12:024061906 0 W/24061906-24061906 FN-85 Single Base Substitution G-A INTRON HOMO SNo: 85, Mutant_ID: FN-85, Generation: M2, Mutations: 48, Genes: 10, Seed availability: Yes. FN-161.SNP.12:24065302 chr12:024065302 0 W/24065302-24065302 FN-161 Single Base Substitution C-T INTERGENIC HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN409-S.SNP.12:24067313 chr12:024067313 0 W/24067313-24067313 FN409-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HET LOC_Os12g39120 protein phosphatase 2C, putative, expressed SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. FN4080-S.SNP.12:24067561 chr12:024067561 0 W/24067561-24067561 FN4080-S SNP G -> A AC=1;AN=182;BQB=0.975368;DP=3040;DP4=1330,1624,9,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.21901e-09;MQSB=0.980569;RPB=0.375327;SGB=66.6657;VDB=0.257102;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtc/Atc|V187I|392|LOC_Os12g39120|protein_coding|CODING|LOC_Os12g39120.1|2|1) FN533-S.SNP.12:24070116 chr12:024070116 0 W/24070116-24070116 FN533-S Single Base Substitution T-C INTERGENIC HOMO SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN3310-S.SNP.12:24071653 chr12:024071653 0 W/24071653-24071653 FN3310-S SNP A -> T AC=1;AN=184;BQB=0.989542;DP=3396;DP4=1522,1681,9,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.25374e-12;MQSB=0.973998;RPB=0.993164;SGB=63.9222;VDB=0.568045;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:24075311 chr12:024075311 0 W/24075311-24075311 FN1520-S Single Base Substitution A-C INTERGENIC HET SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1062-S.SNP.12:24088446 chr12:024088446 0 W/24088446-24088446 FN1062-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 951, Mutant_ID: FN1062-S, Generation: M2, Mutations: 70, Genes: 23, Seed availability: Yes. FN1113-S.SNP.12:24093479 chr12:024093479 0 W/24093479-24093479 FN1113-S Single Base Substitution A-T INTERGENIC HET SNo: 985, Mutant_ID: FN1113-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: Yes. FN565-S.SNP.12:24095510 chr12:024095510 0 W/24095510-24095510 FN565-S Single Base Substitution G-A INTERGENIC HET SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN3707-S.SNP.12:24098852 chr12:024098852 0 W/24098852-24098852 FN3707-S SNP T -> A AC=2;AN=190;BQB=0.854749;DP=2457;DP4=1362,956,18,6;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.45875e-12;MQSB=0.892406;RPB=0.947158;SGB=103.742;VDB=0.979709;EFF=INTERGENIC(MODIFIER||||||||||1) FN2627-S.SNP.12:24108157 chr12:024108157 0 W/24108157-24108157 FN2627-S SNP C -> T AC=1;AN=200;BQB=0.998082;DP=4673;DP4=2197,2264,5,6;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.72894e-07;MQSB=0.997022;RPB=0.801824;SGB=29.4541;VDB=0.0657205;EFF=INTERGENIC(MODIFIER||||||||||1) FN1520-S.SNP.12:24123683 chr12:024123683 0 W/24123683-24123683 FN1520-S Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1520-S.SNP.12:24123684 chr12:024123684 0 W/24123684-24123684 FN1520-S Single Base Substitution G-A UTR_5_PRIME Homo SNo: 1272, Mutant_ID: FN1520-S, Generation: M2, Mutations: 106, Genes: 29, Seed availability: Yes. FN1658-S.SNP.12:24125136 chr12:024125136 0 W/24125136-24125136 FN1658-S SNP T -> C AC=1;AN=188;BQB=0.734922;DP=2752;DP4=1409,1308,8,8;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.90595e-06;MQSB=0.973216;RPB=0.951821;SGB=5.5382;VDB=0.714384;EFF=INTERGENIC(MODIFIER||||||||||1) FN2658-S.SNP.12:24136237 chr12:024136237 0 W/24136237-24136237 FN2658-S SNP A -> G AC=1;AN=200;BQB=0.636539;DP=4905;DP4=2584,2161,15,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.31379e-16;MQSB=0.160829;RPB=0.70712;SGB=87.1368;VDB=0.0437668;EFF=INTERGENIC(MODIFIER||||||||||1) FN_N1-151-7.SNP.12:24137600 chr12:024137600 0 W/24137600-24137600 FN_N1-151-7 Single Base Substitution G-A HET SNo: 1380, Mutant_ID: FN_N1-151-7, Generation: M3, Mutations: 76, Genes: 19, Seed availability: No. FN815-S.SNP.12:24150262 chr12:024150262 0 W/24150262-24150262 FN815-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN815-S.SNP.12:24150263 chr12:024150263 0 W/24150263-24150263 FN815-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g39230 expressed protein SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN3448-S.SNP.12:24150291 chr12:024150291 0 W/24150291-24150291 FN3448-S SNP G -> C AC=1;AN=184;BQB=0.842157;DP=2386;DP4=1252,973,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.08879e-08;MQSB=0.996088;RPB=0.853292;SGB=32.2261;VDB=0.391706;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Ggc|R75G|206|LOC_Os12g39230|protein_coding|CODING|LOC_Os12g39230.1|1|1) FN1583-S.SNP.12:24150566 chr12:024150566 0 W/24150566-24150566 FN1583-S Single Base Substitution G-A INTERGENIC Homo SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN2283.SNP.12:24162179 chr12:024162179 0 W/24162179-24162179 FN2283 SNP C -> G AC=1;AN=192;BQB=0.919179;DP=5170;DP4=2709,2046,14,10;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=6.53702e-12;MQSB=0.732118;RPB=0.224561;SGB=75.4235;VDB=0.983132;EFF=INTERGENIC(MODIFIER||||||||||1) FN4181-S.SNP.12:24162505 chr12:024162505 0 W/24162505-24162505 FN4181-S SNP G -> A AC=2;AN=170;BQB=0.682174;DP=3043;DP4=1650,1290,14,18;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=7.36617e-16;MQSB=0.621085;RPB=0.906806;SGB=136.725;VDB=0.715195;EFF=INTERGENIC(MODIFIER||||||||||1) FN1340-S.SNP.12:24164062 chr12:024164062 0 W/24164062-24164062 FN1340-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g39260 retrotransposon protein, putative, unclassified, expressed SNo: 1141, Mutant_ID: FN1340-S, Generation: M2, Mutations: 77, Genes: 76, Seed availability: Yes. FN2579-S.SNP.12:24166780 chr12:024166780 0 W/24166780-24166780 FN2579-S SNP G -> A AC=1;AN=198;BQB=0.984919;DP=3907;DP4=1694,2016,4,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=6.60866e-08;MQSB=0.994554;RPB=0.973112;SGB=21.559;VDB=0.111728;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gAg|G950E|1342|LOC_Os12g39260|protein_coding|CODING|LOC_Os12g39260.1|4|1) FN-110.SNP.12:24169800 chr12:024169800 0 W/24169800-24169800 FN-110 Single Base Substitution G-T SYNONYMOUS_CODING HET SNo: 110, Mutant_ID: FN-110, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN3591-S.SNP.12:24176949 chr12:024176949 0 W/24176949-24176949 FN3591-S SNP C -> A AC=1;AN=188;BQB=0.92729;DP=3388;DP4=1786,1522,14,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.84003e-10;MQSB=0.499807;RPB=0.731393;SGB=67.1521;VDB=0.765708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2455.SNP.12:24181668 chr12:024181668 0 W/24181668-24181668 FN2455 SNP G -> T AC=1;AN=200;BQB=0.845519;DP=2666;DP4=1273,1071,5,4;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0;MQB=0.000343234;MQSB=0.000366862;RPB=0.945275;SGB=35.8441;VDB=0.160384;EFF=INTERGENIC(MODIFIER||||||||||1) FN-184.SNP.12:24185335 chr12:024185335 0 W/24185335-24185335 FN-184 Single Base Substitution C-G INTRON HET SNo: 184, Mutant_ID: FN-184, Generation: M2, Mutations: 62, Genes: 21, Seed availability: Yes. FN3487-S.SNP.12:24197317 chr12:024197317 0 W/24197317-24197317 FN3487-S SNP G -> A AC=1;AN=184;BQB=0.497149;DP=1995;DP4=915,1047,5,9;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.26473e-07;MQSB=0.998761;RPB=0.888175;SGB=39.2697;VDB=0.293143;EFF=UTR_3_PRIME(MODIFIER||87||695|LOC_Os12g39320|protein_coding|CODING|LOC_Os12g39320.1|10|1) FN2614-S.SNP.12:24209542 chr12:024209542 0 W/24209542-24209542 FN2614-S SNP C -> T AC=1;AN=198;BQB=0.338027;DP=3370;DP4=1635,1542,3,10;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.23261e-07;MQSB=0.689161;RPB=0.329893;SGB=36.5539;VDB=0.600287;EFF=INTERGENIC(MODIFIER||||||||||1) FN2108-S.SNP.12:24211076 chr12:024211076 0 W/24211076-24211076 FN2108-S SNP T -> C AC=1;AN=168;BQB=0.0244723;DP=4283;DP4=2076,2163,17,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=6.81905e-12;MQSB=0.988267;RPB=0.571529;SGB=-186.896;VDB=0.73695;EFF=INTERGENIC(MODIFIER||||||||||1) FN2103-S.SNP.12:24211774 chr12:024211774 0 W/24211774-24211774 FN2103-S SNP A -> C AC=2;AN=168;BQB=0.998965;DP=3876;DP4=1826,1996,24,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=6.23292e-24;MQSB=0.986264;RPB=0.944899;SGB=92.6784;VDB=0.824917;EFF=INTERGENIC(MODIFIER||||||||||1) FN4253-S.SNP.12:24212828 chr12:024212828 0 W/24212828-24212828 FN4253-S SNP G -> T AC=2;AN=170;BQB=0.588235;DP=2079;DP4=930,1061,12,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=5.47051e-12;MQSB=0.814957;RPB=0.897915;SGB=74.528;VDB=0.398319;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G80C|446|LOC_Os12g39360|protein_coding|CODING|LOC_Os12g39360.1|1|1) FN4253-S.SNP.12:24212829 chr12:024212829 0 W/24212829-24212829 FN4253-S SNP G -> T AC=2;AN=170;BQB=0.975485;DP=2096;DP4=938,1062,13,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.2421e-12;MQSB=0.80487;RPB=0.871499;SGB=78.9707;VDB=0.423267;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gTc|G80V|446|LOC_Os12g39360|protein_coding|CODING|LOC_Os12g39360.1|1|1) FN926-S.SNP.12:24217586 chr12:024217586 0 W/24217586-24217586 FN926-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 832, Mutant_ID: FN926-S, Generation: M2, Mutations: 78, Genes: 13, Seed availability: Yes. W443-5-1-3.SNP.12:24220188 chr12:024220188 0 W/24220188-24220188 W443-5-1-3 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g39380 BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed SNo: 1413, Mutant_ID: W443-5-1-3, Generation: M2, Mutations: 60, Genes: 9, Seed availability: No. FN2175-S.SNP.12:24228014 chr12:024228014 0 W/24228014-24228014 FN2175-S SNP T -> G AC=1;AN=168;BQB=0.000899893;DP=4238;DP4=2128,2056,22,18;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.44781e-11;MQSB=0.969293;RPB=0.488312;SGB=-316.868;VDB=0.268203;EFF=INTERGENIC(MODIFIER||||||||||1) FN1682-S.SNP.12:24231420 chr12:024231420 0 W/24231420-24231420 FN1682-S SNP A -> G AC=1;AN=188;BQB=0.329083;DP=4007;DP4=1790,2154,15,22;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.62852e-12;MQSB=0.903682;RPB=0.982582;SGB=-128.204;VDB=0.625787;EFF=INTERGENIC(MODIFIER||||||||||1) FN2755-S.SNP.12:24232295 chr12:024232295 0 W/24232295-24232295 FN2755-S SNP T -> A AC=1;AN=200;BQB=0.979464;DP=3446;DP4=1204,1887,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.2696e-08;MQSB=0.315266;RPB=0.335159;SGB=-0.141083;VDB=0.248536;EFF=INTERGENIC(MODIFIER||||||||||1) 706-1.SNP.12:24234864 chr12:024234864 0 W/24234864-24234864 706-1 Single Base Substitution G-A INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. 706-2.SNP.12:24234864 chr12:024234864 0 W/24234864-24234864 706-2 Single Base Substitution G-A INTERGENIC HET SNo: 1467, Mutant_ID: 706-2, Generation: M2, Mutations: 31, Genes: 5, Seed availability: Yes. FN2444.SNP.12:24241073 chr12:024241073 0 W/24241073-24241073 FN2444 SNP A -> G AC=2;AN=200;BQB=0.741504;DP=5087;DP4=2542,2281,25,24;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=9.30042e-28;MQSB=0.999981;RPB=0.862637;SGB=166.451;VDB=0.391328;EFF=INTERGENIC(MODIFIER||||||||||1) FN-247.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN-247 Single Base Substitution C-T INTERGENIC HOMO SNo: 246, Mutant_ID: FN-247, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN-312.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN-312 Single Base Substitution C-T INTERGENIC HOMO SNo: 307, Mutant_ID: FN-312, Generation: M2, Mutations: 40, Genes: 6, Seed availability: Yes. FN1297-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN1297-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1107, Mutant_ID: FN1297-S, Generation: M2, Mutations: 92, Genes: 29, Seed availability: Yes. FN1484-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN1484-S Single Base Substitution C-T INTERGENIC HET SNo: 1248, Mutant_ID: FN1484-S, Generation: M2, Mutations: 97, Genes: 49, Seed availability: Yes. FN1566-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN1566-S Single Base Substitution C-T INTERGENIC Homo SNo: 1307, Mutant_ID: FN1566-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: Yes. FN1644-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN1644-S Single Base Substitution C-T INTERGENIC Homo SNo: 1349, Mutant_ID: FN1644-S, Generation: M2, Mutations: 65, Genes: 37, Seed availability: Yes. FN2201-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.798041;DP=3733;DP4=1700,1718,26,21;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.30453e-22;MQSB=0.168049;RPB=0.887657;SGB=156.932;VDB=0.192011;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN2449 SNP C -> T AC=2;AN=200;BQB=0.905785;DP=4292;DP4=2016,1970,14,14;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.37181e-13;MQSB=0.372759;RPB=0.670633;SGB=90.7419;VDB=0.121294;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN369-S Single Base Substitution C-T INTERGENIC HOMO SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN3806-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN3806-S SNP C -> T AC=1;AN=190;BQB=0.918447;DP=2932;DP4=1362,1487,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.03403e-07;MQSB=0.993351;RPB=0.982374;SGB=44.5415;VDB=0.939949;EFF=INTERGENIC(MODIFIER||||||||||1) FN3955-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN3955-S SNP C -> T AC=2;AN=168;BQB=0.927488;DP=2696;DP4=1247,1340,8,26;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.90556e-19;MQSB=0.999792;RPB=0.675321;SGB=106.795;VDB=0.616894;EFF=INTERGENIC(MODIFIER||||||||||1) FN4187-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN4187-S SNP C -> T AC=2;AN=170;BQB=0.849218;DP=2324;DP4=1008,1236,10,15;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.01101e-15;MQSB=0.997351;RPB=0.168151;SGB=105.627;VDB=0.0562465;EFF=INTERGENIC(MODIFIER||||||||||1) FN469-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN469-S Single Base Substitution C-T INTERGENIC HOMO SNo: 468, Mutant_ID: FN469-S, Generation: M2, Mutations: 70, Genes: 80, Seed availability: Yes. FN632-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN632-S Single Base Substitution C-T INTERGENIC HOMO SNo: 597, Mutant_ID: FN632-S, Generation: M2, Mutations: 69, Genes: 19, Seed availability: Yes. FN780-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN780-S Single Base Substitution C-T INTERGENIC HET SNo: 701, Mutant_ID: FN780-S, Generation: M2, Mutations: 70, Genes: 168, Seed availability: Yes. FN853-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN853-S Single Base Substitution C-T INTERGENIC HET SNo: 759, Mutant_ID: FN853-S, Generation: M2, Mutations: 37, Genes: 8, Seed availability: Yes. FN908-S.SNP.12:24242495 chr12:024242495 0 W/24242495-24242495 FN908-S Single Base Substitution C-T INTERGENIC HOMO SNo: 814, Mutant_ID: FN908-S, Generation: M2, Mutations: 81, Genes: 69, Seed availability: Yes. FN2473.SNP.12:24243233 chr12:024243233 0 W/24243233-24243233 FN2473 SNP T -> G AC=1;AN=200;BQB=0.870484;DP=4427;DP4=2025,2154,8,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.05991e-06;MQSB=0.396375;RPB=0.925195;SGB=16.4591;VDB=0.181894;EFF=INTRON(MODIFIER||||126|LOC_Os12g39410|protein_coding|CODING|LOC_Os12g39410.1|3|1) FN1538-S.SNP.12:24251601 chr12:024251601 0 W/24251601-24251601 FN1538-S Single Base Substitution G-C INTRON Homo SNo: 1288, Mutant_ID: FN1538-S, Generation: M2, Mutations: 91, Genes: 42, Seed availability: Yes. FN3941-S.SNP.12:24254494 chr12:024254494 0 W/24254494-24254494 FN3941-S SNP A -> G AC=2;AN=168;BQB=0.768367;DP=2677;DP4=1212,1339,9,16;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.30433e-11;MQSB=0.972827;RPB=0.246103;SGB=17.068;VDB=0.798739;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.12:24260938 chr12:024260938 0 W/24260938-24260938 FN224-S Single Base Substitution G-A INTERGENIC HOMO SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1553-S.SNP.12:24263640 chr12:024263640 0 W/24263640-24263640 FN1553-S Single Base Substitution C-G INTERGENIC HET SNo: 1298, Mutant_ID: FN1553-S, Generation: M2, Mutations: 85, Genes: 19, Seed availability: Yes. FN-390.SNP.12:24266954 chr12:024266954 0 W/24266954-24266954 FN-390 Single Base Substitution C-T INTRON HET SNo: 376, Mutant_ID: FN-390, Generation: M2, Mutations: 64, Genes: 25, Seed availability: Yes. FN2530-S.SNP.12:24268854 chr12:024268854 0 W/24268854-24268854 FN2530-S SNP T -> C AC=1;AN=198;BQB=0.635437;DP=2910;DP4=2263,456,12,0;HOB=5.10152e-05;ICB=0.000102546;MQ=37;MQ0F=0.0350515;MQB=0.871913;MQSB=1.56501e-05;RPB=0.798185;SGB=16.3688;VDB=0.804268;EFF=INTRON(MODIFIER||||290|LOC_Os12g39430|protein_coding|CODING|LOC_Os12g39430.1|4|1) FN3420-S.SNP.12:24269413 chr12:024269413 0 W/24269413-24269413 FN3420-S SNP C -> A AC=2;AN=184;BQB=0.481819;DP=1931;DP4=907,958,8,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.6661e-08;MQSB=0.643913;RPB=0.995119;SGB=89.4385;VDB=0.205261;EFF=INTRON(MODIFIER||||290|LOC_Os12g39430|protein_coding|CODING|LOC_Os12g39430.1|4|1) FN2383.SNP.12:24272538 chr12:024272538 0 W/24272538-24272538 FN2383 SNP C -> T AC=1;AN=192;BQB=0.902538;DP=4735;DP4=2311,2129,5,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.34397e-08;MQSB=0.9883;RPB=0.996176;SGB=39.78;VDB=0.529691;EFF=INTRON(MODIFIER||||290|LOC_Os12g39430|protein_coding|CODING|LOC_Os12g39430.1|1|1) FN2637-S.SNP.12:24272675 chr12:024272675 0 W/24272675-24272675 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.700996;DP=4622;DP4=2406,1953,16,18;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.56637e-18;MQSB=0.999102;RPB=0.833089;SGB=112.373;VDB=0.70246;EFF=SYNONYMOUS_CODING(LOW|SILENT|caG/caA|Q56|290|LOC_Os12g39430|protein_coding|CODING|LOC_Os12g39430.1|1|1) FN1198-S.SNP.12:24284889 chr12:024284889 0 W/24284889-24284889 FN1198-S Single Base Substitution G-A INTERGENIC HET SNo: 1031, Mutant_ID: FN1198-S, Generation: M2, Mutations: 44, Genes: 31, Seed availability: Yes. FN4084-S.SNP.12:24287541 chr12:024287541 0 W/24287541-24287541 FN4084-S SNP C -> T AC=1;AN=182;BQB=0.275197;DP=2671;DP4=1164,1422,7,7;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=5.02907e-06;MQSB=0.997098;RPB=0.831277;SGB=39.1386;VDB=0.878675;EFF=INTERGENIC(MODIFIER||||||||||1) FN1000-S.SNP.12:24288326 chr12:024288326 0 W/24288326-24288326 FN1000-S Single Base Substitution C-A INTERGENIC HET SNo: 903, Mutant_ID: FN1000-S, Generation: M2, Mutations: 48, Genes: 11, Seed availability: Yes. FN2221-S.SNP.12:24290499 chr12:024290499 0 W/24290499-24290499 FN2221-S SNP A -> G AC=2;AN=190;BQB=0.192519;DP=4832;DP4=2339,2100,19,28;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000413907;MQB=1.08898e-25;MQSB=0.951653;RPB=0.795779;SGB=208.481;VDB=0.0883937;EFF=INTERGENIC(MODIFIER||||||||||1) FN1335-S.SNP.12:24291894 chr12:024291894 0 W/24291894-24291894 FN1335-S Single Base Substitution C-T INTERGENIC HET SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN2791-S.SNP.12:24292443 chr12:024292443 0 W/24292443-24292443 FN2791-S SNP T -> C AC=1;AN=198;BQB=0.329227;DP=4293;DP4=1922,2158,11,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=8.87127e-14;MQSB=0.999441;RPB=0.189057;SGB=15.7299;VDB=0.557654;EFF=INTERGENIC(MODIFIER||||||||||1) FN-206.SNP.12:24302524 chr12:024302524 0 W/24302524-24302524 FN-206 Single Base Substitution C-A INTERGENIC HET SNo: 206, Mutant_ID: FN-206, Generation: M2, Mutations: 65, Genes: 206, Seed availability: Yes. FN1633-S.SNP.12:24302524 chr12:024302524 0 W/24302524-24302524 FN1633-S Single Base Substitution C-A INTERGENIC HET SNo: 1340, Mutant_ID: FN1633-S, Generation: M2, Mutations: 119, Genes: 41, Seed availability: Yes. FN2386.SNP.12:24302599 chr12:024302599 0 W/24302599-24302599 FN2386 SNP G -> A AC=1;AN=192;BQB=0.809725;DP=4788;DP4=2249,2106,16,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.58747e-17;MQSB=0.841181;RPB=0.368169;SGB=-5.7391;VDB=0.976526;EFF=INTERGENIC(MODIFIER||||||||||1) FN2146-S.SNP.12:24302829 chr12:024302829 0 W/24302829-24302829 FN2146-S SNP C -> G AC=1;AN=168;BQB=0.740083;DP=3369;DP4=1707,1619,11,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.24179e-09;MQSB=0.731841;RPB=0.714691;SGB=-14.5109;VDB=0.524808;EFF=INTERGENIC(MODIFIER||||||||||1) FN2703-S.SNP.12:24308987 chr12:024308987 0 W/24308987-24308987 FN2703-S SNP G -> C AC=1;AN=200;BQB=0.252505;DP=4646;DP4=2158,2232,9,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.3689e-06;MQSB=0.950069;RPB=0.851576;SGB=40.2696;VDB=0.217162;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.12:24310352 chr12:024310352 0 W/24310352-24310352 FN1423-S Single Base Substitution G-T INTERGENIC HOMO SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN3658-S.SNP.12:24328104 chr12:024328104 0 W/24328104-24328104 FN3658-S SNP G -> A AC=1;AN=190;BQB=0.570182;DP=2860;DP4=1301,1486,4,4;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=0.0111272;MQSB=7.04454e-15;RPB=0.901315;SGB=30.8803;VDB=0.742256;EFF=INTERGENIC(MODIFIER||||||||||1) FN4158-S.SNP.12:24329851 chr12:024329851 0 W/24329851-24329851 FN4158-S SNP G -> C AC=1;AN=170;BQB=0.555456;DP=3493;DP4=1593,1817,7,9;HOB=6.92042e-05;ICB=0.000139222;MQ=40;MQ0F=0.0535356;MQB=0.936616;MQSB=3.70776e-09;RPB=0.709844;SGB=45.206;VDB=0.388543;EFF=INTERGENIC(MODIFIER||||||||||1) FN2600-S.SNP.12:24345998 chr12:024345998 0 W/24345998-24345998 FN2600-S SNP C -> T AC=1;AN=198;BQB=0.87439;DP=4633;DP4=2282,2118,14,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.40207e-15;MQSB=0.931454;RPB=0.641313;SGB=52.7004;VDB=0.795038;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.12:24350245 chr12:024350245 0 W/24350245-24350245 FN945-S Single Base Substitution A-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN4140-S.SNP.12:24353562 chr12:024353562 0 W/24353562-24353562 FN4140-S SNP T -> A AC=1;AN=170;BQB=0.160329;DP=2297;DP4=1044,1167,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.00460106;MQSB=0.992591;RPB=0.988056;SGB=34.5445;VDB=0.959059;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTa/cAa|L15Q|80|LOC_Os12g39510|protein_coding|CODING|LOC_Os12g39510.1|1|1) FN-4.SNP.12:24357293 chr12:024357293 0 W/24357293-24357293 FN-4 Single Base Substitution C-G INTERGENIC Homo SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN1401-S.SNP.12:24357293 chr12:024357293 0 W/24357293-24357293 FN1401-S Single Base Substitution C-G INTERGENIC HET SNo: 1180, Mutant_ID: FN1401-S, Generation: M2, Mutations: 77, Genes: 24, Seed availability: Yes. FN2140-S.SNP.12:24361341 chr12:024361341 0 W/24361341-24361341 FN2140-S SNP T -> C AC=1;AN=168;BQB=0.128973;DP=2997;DP4=1304,1621,7,11;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.06631e-06;MQSB=0.998754;RPB=0.442326;SGB=-37.7974;VDB=0.904899;EFF=INTERGENIC(MODIFIER||||||||||1) FN534-S.SNP.12:24376659 chr12:024376659 0 W/24376659-24376659 FN534-S Single Base Substitution C-T INTERGENIC HOMO SNo: 531, Mutant_ID: FN534-S, Generation: M2, Mutations: 61, Genes: 47, Seed availability: Yes. FN1458-S.SNP.12:24376660 chr12:024376660 0 W/24376660-24376660 FN1458-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1226, Mutant_ID: FN1458-S, Generation: M2, Mutations: 71, Genes: 10, Seed availability: Yes. FN1214-S.SNP.12:24383337 chr12:024383337 0 W/24383337-24383337 FN1214-S Single Base Substitution G-A INTERGENIC HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2494.SNP.12:24401788 chr12:024401788 0 W/24401788-24401788 FN2494 SNP T -> G AC=1;AN=200;BQB=0.607905;DP=4167;DP4=2166,1721,7,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.67299e-07;MQSB=0.137021;RPB=0.662104;SGB=58.8698;VDB=0.227482;EFF=INTERGENIC(MODIFIER||||||||||1) FN3769-S.SNP.12:24405761 chr12:024405761 0 W/24405761-24405761 FN3769-S SNP C -> T AC=1;AN=188;BQB=0.987977;DP=3048;DP4=1460,1491,8,4;HOB=5.65867e-05;ICB=0.000113775;MQ=44;MQ0F=0.00590551;MQB=0.00532783;MQSB=0.361442;RPB=0.866697;SGB=15.9981;VDB=0.925504;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtt/Att|V614I|932|LOC_Os12g39570|protein_coding|CODING|LOC_Os12g39570.1|2|1) FN3811-S.SNP.12:24406059 chr12:024406059 0 W/24406059-24406059 FN3811-S SNP C -> A AC=1;AN=190;BQB=0.937444;DP=2946;DP4=1283,1541,7,10;HOB=5.54017e-05;ICB=0.000111386;MQ=16;MQ0F=0.290903;MQB=0.31419;MQSB=0.00110824;RPB=0.830138;SGB=50.3161;VDB=0.916415;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgG/tgT|W514C|932|LOC_Os12g39570|protein_coding|CODING|LOC_Os12g39570.1|2|1) FN3058-S.SNP.12:24408202 chr12:024408202 0 W/24408202-24408202 FN3058-S SNP C -> T AC=1;AN=184;BQB=0.946704;DP=2725;DP4=1274,1369,8,6;HOB=5.90737e-05;ICB=0.00011879;MQ=25;MQ0F=0.223853;MQB=0.116404;MQSB=0;RPB=0.0152147;SGB=57.786;VDB=0.065595;EFF=INTERGENIC(MODIFIER||||||||||1) FN3846-S.SNP.12:24409074 chr12:024409074 0 W/24409074-24409074 FN3846-S SNP A -> C AC=1;AN=188;BQB=0.599271;DP=2361;DP4=1226,1063,11,10;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.50241e-11;MQSB=0.999592;RPB=0.876534;SGB=90.0802;VDB=0.990483;EFF=INTERGENIC(MODIFIER||||||||||1) FN2449.SNP.12:24409126 chr12:024409126 0 W/24409126-24409126 FN2449 SNP G -> A AC=1;AN=200;BQB=0.956041;DP=4535;DP4=2154,2082,9,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.99381e-11;MQSB=0.96672;RPB=0.873526;SGB=29.4849;VDB=0.495598;EFF=INTERGENIC(MODIFIER||||||||||1) FN2584-S.SNP.12:24410230 chr12:024410230 0 W/24410230-24410230 FN2584-S SNP T -> A AC=2;AN=198;BQB=0.842086;DP=4140;DP4=2128,1727,30,37;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=6.86733e-36;MQSB=0.693252;RPB=0.353985;SGB=220.525;VDB=0.903557;EFF=INTERGENIC(MODIFIER||||||||||1) FN1264-S.SNP.12:24420049 chr12:024420049 0 W/24420049-24420049 FN1264-S Single Base Substitution C-T INTERGENIC HOMO SNo: 1079, Mutant_ID: FN1264-S, Generation: M2, Mutations: 72, Genes: 26, Seed availability: Yes. FN2480.SNP.12:24422317 chr12:024422317 0 W/24422317-24422317 FN2480 SNP T -> C AC=2;AN=200;BQB=0.935735;DP=3899;DP4=1857,1618,14,13;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.50074e-16;MQSB=0.919361;RPB=0.378363;SGB=118.737;VDB=0.581577;EFF=INTRON(MODIFIER||||902|LOC_Os12g39580|protein_coding|CODING|LOC_Os12g39580.1|3|1) FN785-S.SNP.12:24422317 chr12:024422317 0 W/24422317-24422317 FN785-S Single Base Substitution T-C INTRON HET SNo: 706, Mutant_ID: FN785-S, Generation: M2, Mutations: 63, Genes: 14, Seed availability: Yes. FN4208-S.SNP.12:24424059 chr12:024424059 0 W/24424059-24424059 FN4208-S SNP A -> G AC=1;AN=170;BQB=0.34918;DP=2702;DP4=1264,1290,11,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=6.0914e-06;MQSB=0.950705;RPB=0.0628272;SGB=19.8839;VDB=0.0721549;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAg/gGg|E792G|902|LOC_Os12g39580|protein_coding|CODING|LOC_Os12g39580.1|6|1) W246-5-1.SNP.12:24429674 chr12:024429674 0 W/24429674-24429674 W246-5-1 Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os12g39590 retrotransposon protein, putative, unclassified, expressed SNo: 1399, Mutant_ID: W246-5-1, Generation: M2, Mutations: 89, Genes: 33, Seed availability: No. FN3529-S.SNP.12:24429731 chr12:024429731 0 W/24429731-24429731 FN3529-S SNP C -> T AC=1;AN=188;BQB=0.976427;DP=4080;DP4=1907,2067,3,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.46101e-05;MQSB=0.979916;RPB=0.999907;SGB=39.8925;VDB=0.0877876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGg/cAg|R292Q|1320|LOC_Os12g39590|protein_coding|CODING|LOC_Os12g39590.1|2|1) FN1046-S.SNP.12:24429893 chr12:024429893 0 W/24429893-24429893 FN1046-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g39590 retrotransposon protein, putative, unclassified, expressed SNo: 940, Mutant_ID: FN1046-S, Generation: M2, Mutations: 71, Genes: 174, Seed availability: Yes. FN3425-S.SNP.12:24430595 chr12:024430595 0 W/24430595-24430595 FN3425-S SNP G -> T AC=1;AN=184;BQB=0.598807;DP=3746;DP4=1739,1905,13,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.50971e-09;MQSB=0.675843;RPB=0.980902;SGB=84.9167;VDB=0.342935;EFF=INTRON(MODIFIER||||1320|LOC_Os12g39590|protein_coding|CODING|LOC_Os12g39590.1|1|1) FN4128-S.SNP.12:24441160 chr12:024441160 0 W/24441160-24441160 FN4128-S SNP A -> G AC=2;AN=182;BQB=0.948654;DP=2838;DP4=1357,1404,12,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=5.20536e-15;MQSB=0.197284;RPB=0.558644;SGB=111.774;VDB=0.346406;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAt/gGt|D289G|741|LOC_Os12g39600|protein_coding|CODING|LOC_Os12g39600.1|3|1) FN2093-S.SNP.12:24445120 chr12:024445120 0 W/24445120-24445120 FN2093-S SNP G -> T AC=1;AN=168;BQB=0.875696;DP=3266;DP4=1465,1737,7,21;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.46131e-12;MQSB=0.626564;RPB=0.805984;SGB=21.3605;VDB=0.844562;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aaC/aaA|N1303K|1752|LOC_Os12g39610|protein_coding|CODING|LOC_Os12g39610.1|3|1) FN-300.SNP.12:24447372 chr12:024447372 0 W/24447372-24447372 FN-300 Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g39610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 295, Mutant_ID: FN-300, Generation: M2, Mutations: 49, Genes: 44, Seed availability: Yes. FN1118-S.SNP.12:24448807 chr12:024448807 0 W/24448807-24448807 FN1118-S Single Base Substitution G-T INTRON HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN2687-S.SNP.12:24449715 chr12:024449715 0 W/24449715-24449715 FN2687-S SNP G -> A AC=2;AN=200;BQB=0.236871;DP=4731;DP4=2205,2160,18,21;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0;MQB=4.60475e-14;MQSB=0.176731;RPB=0.989898;SGB=86.7987;VDB=0.399148;EFF=INTERGENIC(MODIFIER||||||||||1) FN1669-S.SNP.12:24450866 chr12:024450866 0 W/24450866-24450866 FN1669-S SNP G -> C AC=2;AN=188;BQB=0.2611;DP=2699;DP4=1722,932,10,15;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=6.20686e-09;MQSB=0.323354;RPB=0.918921;SGB=-98.724;VDB=0.832527;EFF=INTERGENIC(MODIFIER||||||||||1) FN4043-S.SNP.12:24465259 chr12:024465259 0 W/24465259-24465259 FN4043-S SNP T -> A AC=1;AN=168;BQB=0.612687;DP=2590;DP4=1026,1424,6,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.2975e-07;MQSB=0.611294;RPB=0.846049;SGB=45.0404;VDB=0.514454;EFF=INTERGENIC(MODIFIER||||||||||1) FN2354.SNP.12:24466309 chr12:024466309 0 W/24466309-24466309 FN2354 SNP A -> T AC=2;AN=192;BQB=0.940949;DP=4865;DP4=2360,2152,28,15;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.75001e-27;MQSB=0.974501;RPB=0.975731;SGB=48.0279;VDB=0.759395;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.12:24466973 chr12:024466973 0 W/24466973-24466973 FN2242-S SNP T -> C AC=2;AN=190;BQB=0.769749;DP=4826;DP4=2275,2082,21,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=9.22639e-16;MQSB=0.871264;RPB=0.909351;SGB=33.6348;VDB=0.388716;EFF=INTERGENIC(MODIFIER||||||||||1) FN1399-S.SNP.12:24468498 chr12:024468498 0 W/24468498-24468498 FN1399-S Single Base Substitution A-T INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN2593-S.SNP.12:24469670 chr12:024469670 0 W/24469670-24469670 FN2593-S SNP C -> T AC=1;AN=198;BQB=0.976719;DP=4460;DP4=2183,1909,22,17;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.02633e-21;MQSB=0.995936;RPB=0.712669;SGB=86.437;VDB=0.130423;EFF=INTERGENIC(MODIFIER||||||||||1) FN2150-S.SNP.12:24471858 chr12:024471858 0 W/24471858-24471858 FN2150-S SNP T -> C AC=1;AN=168;BQB=0.398388;DP=4000;DP4=1869,2095,19,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.24914e-15;MQSB=0.874218;RPB=0.377292;SGB=22.7913;VDB=0.150263;EFF=INTERGENIC(MODIFIER||||||||||1) FN1368-S.SNP.12:24473110 chr12:024473110 0 W/24473110-24473110 FN1368-S Single Base Substitution G-C INTERGENIC HET SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN3768-S.SNP.12:24478945 chr12:024478945 0 W/24478945-24478945 FN3768-S SNP G -> A AC=1;AN=188;BQB=0.0817204;DP=2583;DP4=1055,1422,4,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.00406721;MQSB=0.964588;RPB=0.450657;SGB=44.5415;VDB=0.156888;EFF=INTRON(MODIFIER||||566|LOC_Os12g39650|protein_coding|CODING|LOC_Os12g39650.1|1|1) FN2668-S.SNP.12:24484921 chr12:024484921 0 W/24484921-24484921 FN2668-S SNP T -> A AC=1;AN=200;BQB=0.631935;DP=4510;DP4=1724,2583,13,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.40499e-12;MQSB=0.00192558;RPB=0.73669;SGB=63.3521;VDB=0.999763;EFF=INTERGENIC(MODIFIER||||||||||1) FN2102-S.SNP.12:24485218 chr12:024485218 0 W/24485218-24485218 FN2102-S SNP T -> C AC=1;AN=168;BQB=0.0480261;DP=3648;DP4=1296,2310,9,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000117243;MQSB=0.999844;RPB=0.996255;SGB=-141.204;VDB=0.535172;EFF=INTERGENIC(MODIFIER||||||||||1) FN1381-S.SNP.12:24487060 chr12:024487060 0 W/24487060-24487060 FN1381-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN3369-S.SNP.12:24488442 chr12:024488442 0 W/24488442-24488442 FN3369-S SNP G -> T AC=1;AN=184;BQB=0.561344;DP=3037;DP4=1447,1495,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.19005e-10;MQSB=0.859077;RPB=0.333923;SGB=40.9276;VDB=0.83495;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGt/gTt|G684V|1020|LOC_Os12g39660|protein_coding|CODING|LOC_Os12g39660.1|3|1) FN2448.SNP.12:24490814 chr12:024490814 0 W/24490814-24490814 FN2448 SNP A -> G AC=1;AN=200;BQB=0.0249345;DP=4465;DP4=2302,1895,12,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.85356e-10;MQSB=0.999812;RPB=0.455225;SGB=7.88476;VDB=0.337124;EFF=UTR_3_PRIME(MODIFIER||156||1020|LOC_Os12g39660|protein_coding|CODING|LOC_Os12g39660.1|7|1) FN3670-S.SNP.12:24490987 chr12:024490987 0 W/24490987-24490987 FN3670-S SNP T -> C AC=1;AN=190;BQB=0.501765;DP=2606;DP4=1258,1250,8,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.12357e-07;MQSB=0.994354;RPB=0.33929;SGB=80.9724;VDB=0.121629;EFF=UTR_3_PRIME(MODIFIER||329||1020|LOC_Os12g39660|protein_coding|CODING|LOC_Os12g39660.1|7|1) FN-356.SNP.12:24491887 chr12:024491887 0 W/24491887-24491887 FN-356 Single Base Substitution G-A INTERGENIC HOMO SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-356.SNP.12:24491888 chr12:024491888 0 W/24491888-24491888 FN-356 Single Base Substitution C-A INTERGENIC HOMO SNo: 346, Mutant_ID: FN-356, Generation: M2, Mutations: 51, Genes: 12, Seed availability: Yes. FN-10.SNP.12:24498000 chr12:024498000 0 W/24498000-24498000 FN-10 Single Base Substitution T-C INTRON Homo SNo: 10, Mutant_ID: FN-10, Generation: M2, Mutations: 48, Genes: 18, Seed availability: Yes. FN-61.SNP.12:24505854 chr12:024505854 0 W/24505854-24505854 FN-61 Single Base Substitution T-A INTERGENIC HOMO SNo: 61, Mutant_ID: FN-61, Generation: M2, Mutations: 46, Genes: 52, Seed availability: Yes. FN1638-S.SNP.12:24527560 chr12:024527560 0 W/24527560-24527560 FN1638-S Single Base Substitution G-A SYNONYMOUS_CODING Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN3381-S.SNP.12:24535555 chr12:024535555 0 W/24535555-24535555 FN3381-S SNP G -> A AC=1;AN=184;BQB=0.714462;DP=2786;DP4=1516,1209,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000155626;MQSB=0.981527;RPB=0.323361;SGB=39.699;VDB=0.216732;EFF=INTRON(MODIFIER||||963|LOC_Os12g39730|protein_coding|CODING|LOC_Os12g39730.1|5|1) FN2115-S.SNP.12:24535847 chr12:024535847 0 W/24535847-24535847 FN2115-S SNP G -> A AC=1;AN=168;BQB=0.995545;DP=3113;DP4=1560,1496,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=9.73208e-12;MQSB=0.985692;RPB=0.999793;SGB=92.0501;VDB=0.816946;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D687|963|LOC_Os12g39730|protein_coding|CODING|LOC_Os12g39730.1|4|1) FN-101.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 FN-101 Single Base Substitution C-T INTERGENIC HET SNo: 101, Mutant_ID: FN-101, Generation: M2, Mutations: 67, Genes: 17, Seed availability: Yes. FN1382-S.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 FN1382-S Single Base Substitution C-T INTERGENIC HET SNo: 1168, Mutant_ID: FN1382-S, Generation: M2, Mutations: 75, Genes: 92, Seed availability: Yes. FN2171-S.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 FN2171-S SNP C -> T AC=2;AN=168;BQB=0.0131862;DP=2855;DP4=1446,1339,15,19;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.30355e-12;MQSB=0.99661;RPB=0.643606;SGB=106.795;VDB=0.964214;EFF=INTERGENIC(MODIFIER||||||||||1) FN2795-S.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 FN2795-S SNP C -> T AC=2;AN=198;BQB=0.407939;DP=4218;DP4=1919,2011,15,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=1.73766e-24;MQSB=0.637259;RPB=0.87946;SGB=196.593;VDB=0.284755;EFF=INTERGENIC(MODIFIER||||||||||1) FN3508-S.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 FN3508-S SNP C -> T AC=2;AN=188;BQB=0.94723;DP=2800;DP4=1256,1487,6,7;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.29467e-08;MQSB=0.974293;RPB=0.99989;SGB=53.5223;VDB=0.963248;EFF=INTERGENIC(MODIFIER||||||||||1) W607-2-1.SNP.12:24539957 chr12:024539957 0 W/24539957-24539957 W607-2-1 Single Base Substitution C-T INTERGENIC HET SNo: 1433, Mutant_ID: W607-2-1, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1443-S.SNP.12:24540561 chr12:024540561 0 W/24540561-24540561 FN1443-S Single Base Substitution G-A INTERGENIC HET SNo: 1214, Mutant_ID: FN1443-S, Generation: M2, Mutations: 77, Genes: 119, Seed availability: Yes. FN1255-S.SNP.12:24562825 chr12:024562825 0 W/24562825-24562825 FN1255-S Single Base Substitution G-T INTERGENIC HET SNo: 1072, Mutant_ID: FN1255-S, Generation: M2, Mutations: 75, Genes: 79, Seed availability: Yes. FN3446-S.SNP.12:24566913 chr12:024566913 0 W/24566913-24566913 FN3446-S SNP G -> A AC=2;AN=184;BQB=0.780891;DP=1487;DP4=290,1118,1,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.26339e-05;MQSB=0.95973;RPB=0.752314;SGB=39.699;VDB=0.517259;EFF=INTERGENIC(MODIFIER||||||||||1) FN1089-S.SNP.12:24571455 chr12:024571455 0 W/24571455-24571455 FN1089-S Single Base Substitution G-A INTRON HOMO SNo: 970, Mutant_ID: FN1089-S, Generation: M2, Mutations: 75, Genes: 20, Seed availability: Yes. FN2711-S.SNP.12:24576268 chr12:024576268 0 W/24576268-24576268 FN2711-S SNP G -> T AC=1;AN=200;BQB=0.308866;DP=4876;DP4=2360,2280,7,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.31049e-11;MQSB=0.780717;RPB=0.752387;SGB=72.6852;VDB=0.096612;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.12:24576805 chr12:024576805 0 W/24576805-24576805 FN806-S Single Base Substitution A-T INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN3575-S.SNP.12:24583136 chr12:024583136 0 W/24583136-24583136 FN3575-S SNP C -> T AC=1;AN=188;BQB=0.627265;DP=3256;DP4=1621,1560,6,11;HOB=5.65867e-05;ICB=0.000113775;MQ=20;MQ0F=0.236794;MQB=0.967041;MQSB=0;RPB=0.433373;SGB=50.1574;VDB=0.368413;EFF=SYNONYMOUS_CODING(LOW|SILENT|ccG/ccA|P495|1805|LOC_Os12g39800|protein_coding|CODING|LOC_Os12g39800.1|10|1) FN3330-S.SNP.12:24590846 chr12:024590846 0 W/24590846-24590846 FN3330-S SNP T -> G AC=1;AN=184;BQB=0.370853;DP=3185;DP4=1119,1841,10,12;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.28632e-07;MQSB=0.152261;RPB=0.920329;SGB=-12.1051;VDB=0.249694;EFF=INTRON(MODIFIER||||1805|LOC_Os12g39800|protein_coding|CODING|LOC_Os12g39800.1|1|1) FN2637-S.SNP.12:24592339 chr12:024592339 0 W/24592339-24592339 FN2637-S SNP C -> T AC=1;AN=200;BQB=0.942855;DP=4870;DP4=2196,2350,13,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000205339;MQB=2.78277e-10;MQSB=0.95214;RPB=0.520009;SGB=9.48993;VDB=0.800357;EFF=INTERGENIC(MODIFIER||||||||||1) FN4150-S.SNP.12:24600521 chr12:024600521 0 W/24600521-24600521 FN4150-S SNP T -> G AC=2;AN=170;BQB=0.858155;DP=2625;DP4=1130,1380,20,23;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.03306e-23;MQSB=0.93733;RPB=0.968506;SGB=185.594;VDB=0.690337;EFF=INTERGENIC(MODIFIER||||||||||1) FN-132.SNP.12:24604536 chr12:024604536 0 W/24604536-24604536 FN-132 Single Base Substitution G-A INTERGENIC HET SNo: 132, Mutant_ID: FN-132, Generation: M2, Mutations: 64, Genes: 52, Seed availability: Yes. FN2540-S.SNP.12:24609490 chr12:024609490 0 W/24609490-24609490 FN2540-S SNP C -> T AC=1;AN=198;BQB=0.31344;DP=3963;DP4=2273,1456,14,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=3.97017e-10;MQSB=0.830682;RPB=0.0202925;SGB=31.9395;VDB=0.492861;EFF=INTERGENIC(MODIFIER||||||||||1) FN893-S.SNP.12:24613480 chr12:024613480 0 W/24613480-24613480 FN893-S Single Base Substitution C-T INTERGENIC HET SNo: 799, Mutant_ID: FN893-S, Generation: M2, Mutations: 58, Genes: 80, Seed availability: Yes. W706-3-1.SNP.12:24618154 chr12:024618154 0 W/24618154-24618154 W706-3-1 Single Base Substitution T-A INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. 706-1.SNP.12:24618155 chr12:024618155 0 W/24618155-24618155 706-1 Single Base Substitution C-A INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. 706-2.SNP.12:24618155 chr12:024618155 0 W/24618155-24618155 706-2 Single Base Substitution C-A INTERGENIC HET SNo: 1467, Mutant_ID: 706-2, Generation: M2, Mutations: 31, Genes: 5, Seed availability: Yes. W706-3-1.SNP.12:24618155 chr12:024618155 0 W/24618155-24618155 W706-3-1 Single Base Substitution C-A INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. 706-1.SNP.12:24618159 chr12:024618159 0 W/24618159-24618159 706-1 Single Base Substitution G-T INTERGENIC Homo SNo: 1466, Mutant_ID: 706-1, Generation: M2, Mutations: 34, Genes: 7, Seed availability: Yes. 706-2.SNP.12:24618159 chr12:024618159 0 W/24618159-24618159 706-2 Single Base Substitution G-T INTERGENIC HET SNo: 1467, Mutant_ID: 706-2, Generation: M2, Mutations: 31, Genes: 5, Seed availability: Yes. W706-3-1.SNP.12:24618159 chr12:024618159 0 W/24618159-24618159 W706-3-1 Single Base Substitution G-T INTERGENIC HOMO SNo: 1468, Mutant_ID: W706-3-1, Generation: M2, Mutations: 67, Genes: 13, Seed availability: Yes. FN1097-S.SNP.12:24619748 chr12:024619748 0 W/24619748-24619748 FN1097-S Single Base Substitution G-T UTR_3_PRIME HOMO SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN929-S.SNP.12:24620509 chr12:024620509 0 W/24620509-24620509 FN929-S Single Base Substitution C-G INTRON HET SNo: 835, Mutant_ID: FN929-S, Generation: M2, Mutations: 55, Genes: 11, Seed availability: Yes. FN2247-S.SNP.12:24644485 chr12:024644485 0 W/24644485-24644485 FN2247-S SNP A -> G AC=1;AN=190;BQB=0.949539;DP=5003;DP4=2386,2347,8,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.06251e-05;MQSB=0.99916;RPB=0.895193;SGB=25.439;VDB=0.448353;EFF=INTRON(MODIFIER||||468|LOC_Os12g39870|protein_coding|CODING|LOC_Os12g39870.1|2|1) FN2614-S.SNP.12:24655014 chr12:024655014 0 W/24655014-24655014 FN2614-S SNP G -> A AC=1;AN=198;BQB=0.999962;DP=3947;DP4=1940,1870,11,12;HOB=5.10152e-05;ICB=0.000102546;MQ=46;MQ0F=0.00836078;MQB=4.12995e-06;MQSB=6.91646e-05;RPB=0.784401;SGB=72.5051;VDB=0.786922;EFF=INTRON(MODIFIER||||549|LOC_Os12g39900|protein_coding|CODING|LOC_Os12g39900.1|1|1) W313-1-1-1-1.SNP.12:24656479 chr12:024656479 0 W/24656479-24656479 W313-1-1-1-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN3372-S.SNP.12:24657397 chr12:024657397 0 W/24657397-24657397 FN3372-S SNP G -> A AC=2;AN=184;BQB=0.834286;DP=3802;DP4=2257,1407,15,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.03302e-17;MQSB=0.987;RPB=0.81086;SGB=116.569;VDB=0.480004;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.12:24659086 chr12:024659086 0 W/24659086-24659086 FN3462-S SNP T -> C AC=2;AN=184;BQB=0.95159;DP=2650;DP4=1203,1281,6,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=3.24746e-10;MQSB=0.845497;RPB=0.956849;SGB=60.4004;VDB=0.0306428;EFF=INTERGENIC(MODIFIER||||||||||1) FN3404-S.SNP.12:24660031 chr12:024660031 0 W/24660031-24660031 FN3404-S SNP T -> C AC=1;AN=184;BQB=0.782005;DP=3074;DP4=1732,1257,6,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000160147;MQSB=0.659418;RPB=0.869355;SGB=25.1826;VDB=0.234935;EFF=INTERGENIC(MODIFIER||||||||||1) FN633-S.SNP.12:24661229 chr12:024661229 0 W/24661229-24661229 FN633-S Single Base Substitution A-T INTERGENIC HET SNo: 598, Mutant_ID: FN633-S, Generation: M2, Mutations: 66, Genes: 23, Seed availability: Yes. FN3316-S.SNP.12:24675365 chr12:024675365 0 W/24675365-24675365 FN3316-S SNP G -> A AC=1;AN=184;BQB=0.981836;DP=3442;DP4=1827,1523,7,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.4309e-05;MQSB=0.964469;RPB=0.795767;SGB=25.1826;VDB=0.602433;EFF=INTERGENIC(MODIFIER||||||||||1) FN2302.SNP.12:24679913 chr12:024679913 0 W/24679913-24679913 FN2302 SNP G -> A AC=1;AN=192;BQB=0.44614;DP=4650;DP4=2214,2190,7,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.02895e-09;MQSB=0.49632;RPB=0.815471;SGB=39.1713;VDB=0.841604;EFF=INTERGENIC(MODIFIER||||||||||1) FN3537-S.SNP.12:24680699 chr12:024680699 0 W/24680699-24680699 FN3537-S SNP C -> A AC=1;AN=188;BQB=0.947699;DP=2652;DP4=1457,1122,8,1;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.22173e-06;MQSB=0.845491;RPB=0.386408;SGB=35.3493;VDB=0.509556;EFF=INTERGENIC(MODIFIER||||||||||1) FN-144.SNP.12:24688905 chr12:024688905 0 W/24688905-24688905 FN-144 Single Base Substitution A-T INTRON HET SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN435-S.SNP.12:24689162 chr12:024689162 0 W/24689162-24689162 FN435-S Single Base Substitution C-G INTRON HOMO SNo: 434, Mutant_ID: FN435-S, Generation: M2, Mutations: 39, Genes: 74, Seed availability: Yes. FN-158.SNP.12:24696565 chr12:024696565 0 W/24696565-24696565 FN-158 Single Base Substitution G-C INTERGENIC HOMO SNo: 158, Mutant_ID: FN-158, Generation: M2, Mutations: 63, Genes: 180, Seed availability: Yes. FN-290.SNP.12:24696565 chr12:024696565 0 W/24696565-24696565 FN-290 Single Base Substitution G-C INTERGENIC HOMO SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN4107-S.SNP.12:24699307 chr12:024699307 0 W/24699307-24699307 FN4107-S SNP A -> G AC=1;AN=182;BQB=0.996957;DP=3227;DP4=1777,1383,9,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.44984e-10;MQSB=0.812337;RPB=0.665491;SGB=49.6712;VDB=0.636117;EFF=INTRON(MODIFIER||||385|LOC_Os12g39970|protein_coding|CODING|LOC_Os12g39970.1|1|1),INTRON(MODIFIER||||385|LOC_Os12g39970|protein_coding|CODING|LOC_Os12g39970.2|1|1),INTRON(MODIFIER||||385|LOC_Os12g39970|protein_coding|CODING|LOC_Os12g39970.3|1|1),INTRON(MODIFIER||||385|LOC_Os12g39970|protein_coding|CODING|LOC_Os12g39970.4|1|1),INTRON(MODIFIER||||385|LOC_Os12g39970|protein_coding|CODING|LOC_Os12g39970.5|1|1) FN831-S.SNP.12:24709332 chr12:024709332 0 W/24709332-24709332 FN831-S Single Base Substitution C-A STOP_GAINED HOMO LOC_Os12g39980 kinesin motor domain containing protein, putative, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN831-S.SNP.12:24709333 chr12:024709333 0 W/24709333-24709333 FN831-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g39980 kinesin motor domain containing protein, putative, expressed SNo: 744, Mutant_ID: FN831-S, Generation: M2, Mutations: 56, Genes: 48, Seed availability: Yes. FN855-S.SNP.12:24709661 chr12:024709661 0 W/24709661-24709661 FN855-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g39980 kinesin motor domain containing protein, putative, expressed SNo: 761, Mutant_ID: FN855-S, Generation: M2, Mutations: 23, Genes: 3, Seed availability: Yes. FN4111-S.SNP.12:24713650 chr12:024713650 0 W/24713650-24713650 FN4111-S SNP C -> A AC=1;AN=182;BQB=0.957633;DP=2888;DP4=1414,1386,18,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=3.25041e-17;MQSB=0.988088;RPB=0.747464;SGB=116.285;VDB=0.503399;EFF=INTRON(MODIFIER||||2793|LOC_Os12g39980|protein_coding|CODING|LOC_Os12g39980.1|12|1) FN3309-S.SNP.12:24718435 chr12:024718435 0 W/24718435-24718435 FN3309-S SNP G -> A AC=2;AN=184;BQB=0.906706;DP=3460;DP4=1416,1913,22,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.96291e-18;MQSB=0.934916;RPB=0.00227429;SGB=109.705;VDB=0.0731457;EFF=INTRON(MODIFIER||||2793|LOC_Os12g39980|protein_coding|CODING|LOC_Os12g39980.1|1|1) FN1638-S.SNP.12:24726149 chr12:024726149 0 W/24726149-24726149 FN1638-S Single Base Substitution G-T INTERGENIC Homo SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1136-19-S.SNP.12:24726212 chr12:024726212 0 W/24726212-24726212 FN1136-19-S Single Base Substitution G-A INTERGENIC HET SNo: 1367, Mutant_ID: FN1136-19-S, Generation: M2, Mutations: 80, Genes: 26, Seed availability: No. FN2339.SNP.12:24736456 chr12:024736456 0 W/24736456-24736456 FN2339 SNP A -> G AC=2;AN=192;BQB=0.954088;DP=4923;DP4=2156,2493,20,24;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=8.33745e-24;MQSB=0.922189;RPB=0.923778;SGB=146.71;VDB=0.709633;EFF=INTERGENIC(MODIFIER||||||||||1) FN2139-S.SNP.12:24749238 chr12:024749238 0 W/24749238-24749238 FN2139-S SNP C -> T AC=1;AN=168;BQB=0.998622;DP=2456;DP4=1462,945,10,6;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00325733;MQB=0.00884261;MQSB=0.140606;RPB=0.263085;SGB=24.6155;VDB=0.694045;EFF=INTERGENIC(MODIFIER||||||||||1) FN224-S.SNP.12:24753030 chr12:024753030 0 W/24753030-24753030 FN224-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g40030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 223, Mutant_ID: FN224-S, Generation: M2, Mutations: 52, Genes: 103, Seed availability: Yes. FN1210-S.SNP.12:24758534 chr12:024758534 0 W/24758534-24758534 FN1210-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 1039, Mutant_ID: FN1210-S, Generation: M2, Mutations: 51, Genes: 25, Seed availability: Yes. FN430-S.SNP.12:24758534 chr12:024758534 0 W/24758534-24758534 FN430-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN_815-4-1.SNP.12:24758534 chr12:024758534 0 W/24758534-24758534 FN_815-4-1 Single Base Substitution C-T Homo SNo: 1491, Mutant_ID: FN_815-4-1, Generation: M3, Mutations: 53, Genes: 11, Seed availability: Yes. FN3404-S.SNP.12:24759784 chr12:024759784 0 W/24759784-24759784 FN3404-S SNP G -> A AC=1;AN=184;BQB=0.787317;DP=2568;DP4=1384,1061,8,2;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000276198;MQSB=0.839483;RPB=0.592836;SGB=25.1826;VDB=0.719004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2622-S.SNP.12:24767595 chr12:024767595 0 W/24767595-24767595 FN2622-S SNP G -> T AC=1;AN=200;BQB=0.970389;DP=4753;DP4=2455,2060,13,8;HOB=5e-05;ICB=0.0001005;MQ=23;MQ0F=0.212077;MQB=0.472554;MQSB=0;RPB=0.656943;SGB=91.1059;VDB=0.45548;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCc/cAc|P1508H|1515|LOC_Os12g40060|protein_coding|CODING|LOC_Os12g40060.1|4|1) FN3889-S.SNP.12:24772947 chr12:024772947 0 W/24772947-24772947 FN3889-S SNP G -> A AC=2;AN=158;BQB=0.928079;DP=2519;DP4=1262,1148,12,11;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=1.39984e-11;MQSB=7.77484e-06;RPB=0.210435;SGB=40.4048;VDB=0.771701;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.12:24773504 chr12:024773504 0 W/24773504-24773504 FN-257 Single Base Substitution T-G INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN3529-S.SNP.12:24777530 chr12:024777530 0 W/24777530-24777530 FN3529-S SNP T -> C AC=2;AN=188;BQB=0.862811;DP=2525;DP4=1170,1272,12,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0.00039604;MQB=8.81941e-13;MQSB=0.865755;RPB=0.950774;SGB=60.7873;VDB=0.890455;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTg/gCg|V447A|661|LOC_Os12g40070|protein_coding|CODING|LOC_Os12g40070.1|8|1) FN4272-S.SNP.12:24783555 chr12:024783555 0 W/24783555-24783555 FN4272-S SNP G -> A AC=1;AN=170;BQB=0.750463;DP=2513;DP4=1180,1247,8,11;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=5.96828e-09;MQSB=0.989343;RPB=0.731946;SGB=55.5339;VDB=0.534239;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.12:24784014 chr12:024784014 0 W/24784014-24784014 FN3293-S SNP A -> T AC=2;AN=184;BQB=0.999996;DP=2661;DP4=1302,1229,14,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000375799;MQB=2.17968e-16;MQSB=0.983773;RPB=0.99723;SGB=78.0093;VDB=0.248195;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.12:24784015 chr12:024784015 0 W/24784015-24784015 FN3293-S SNP C -> G AC=2;AN=184;BQB=0.811042;DP=2674;DP4=1318,1258,13,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000373972;MQB=2.64119e-16;MQSB=0.948793;RPB=0.831921;SGB=78.0093;VDB=0.503358;EFF=INTERGENIC(MODIFIER||||||||||1) FN3293-S.SNP.12:24784016 chr12:024784016 0 W/24784016-24784016 FN3293-S SNP T -> C AC=2;AN=184;BQB=0.990657;DP=2687;DP4=1318,1268,13,11;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.000372162;MQB=9.10887e-16;MQSB=0.961283;RPB=0.998438;SGB=103.004;VDB=0.238872;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.12:24789191 chr12:024789191 0 W/24789191-24789191 FN2758-S SNP T -> G AC=1;AN=200;BQB=0.952863;DP=5136;DP4=2599,2302,12,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.98474e-14;MQSB=0.935537;RPB=0.581335;SGB=69.1109;VDB=0.128086;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.12:24792651 chr12:024792651 0 W/24792651-24792651 FN2621-S SNP G -> A AC=1;AN=200;BQB=0.718774;DP=5082;DP4=2470,2361,16,8;HOB=5e-05;ICB=0.0001005;MQ=20;MQ0F=0.385872;MQB=0.986389;MQSB=0;RPB=0.577263;SGB=76.3213;VDB=0.902899;EFF=INTERGENIC(MODIFIER||||||||||1) FN2621-S.SNP.12:24792652 chr12:024792652 0 W/24792652-24792652 FN2621-S SNP C -> A AC=1;AN=200;BQB=0.924926;DP=5074;DP4=2494,2241,16,8;HOB=5e-05;ICB=0.0001005;MQ=21;MQ0F=0.374852;MQB=0.947498;MQSB=0;RPB=0.48586;SGB=76.3213;VDB=0.900448;EFF=INTERGENIC(MODIFIER||||||||||1) FN1279-S.SNP.12:24811435 chr12:024811435 0 W/24811435-24811435 FN1279-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1093, Mutant_ID: FN1279-S, Generation: M2, Mutations: 66, Genes: 18, Seed availability: Yes. FN2626-S.SNP.12:24829663 chr12:024829663 0 W/24829663-24829663 FN2626-S SNP A -> C AC=1;AN=200;BQB=0.807132;DP=5056;DP4=2462,2368,3,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.98421e-07;MQSB=0.991375;RPB=0.483997;SGB=45.0543;VDB=0.258967;EFF=INTERGENIC(MODIFIER||||||||||1) FN2386.SNP.12:24833183 chr12:024833183 0 W/24833183-24833183 FN2386 SNP C -> A AC=1;AN=192;BQB=0.532897;DP=4886;DP4=2145,2307,10,13;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=7.68344e-13;MQSB=0.999774;RPB=0.318473;SGB=16.7409;VDB=0.735736;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.12:24843064 chr12:024843064 0 W/24843064-24843064 FN771-S Single Base Substitution A-T INTERGENIC HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN771-S.SNP.12:24843065 chr12:024843065 0 W/24843065-24843065 FN771-S Single Base Substitution G-T INTERGENIC HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1431-S.SNP.12:24851342 chr12:024851342 0 W/24851342-24851342 FN1431-S Single Base Substitution T-C INTERGENIC HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1517-S.SNP.12:24855298 chr12:024855298 0 W/24855298-24855298 FN1517-S Single Base Substitution A-G INTERGENIC HET SNo: 1270, Mutant_ID: FN1517-S, Generation: M2, Mutations: 83, Genes: 29, Seed availability: No. FN4139-S.SNP.12:24855683 chr12:024855683 0 W/24855683-24855683 FN4139-S SNP G -> T AC=1;AN=170;BQB=0.571062;DP=2453;DP4=1165,1206,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.12259e-09;MQSB=0.982792;RPB=0.502804;SGB=41.7633;VDB=0.61371;EFF=INTERGENIC(MODIFIER||||||||||1) FN4139-S.SNP.12:24855684 chr12:024855684 0 W/24855684-24855684 FN4139-S SNP C -> T AC=1;AN=170;BQB=0.987933;DP=2451;DP4=1152,1202,7,8;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=4.62494e-10;MQSB=0.992581;RPB=0.803263;SGB=61.2001;VDB=0.496189;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.12:24862899 chr12:024862899 0 W/24862899-24862899 FN2388 SNP C -> T AC=1;AN=200;BQB=0.970664;DP=4085;DP4=1962,1911,8,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.6794e-12;MQSB=0.795271;RPB=0.395586;SGB=72.7161;VDB=0.630261;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T35M|84|LOC_Os12g40170|protein_coding|CODING|LOC_Os12g40170.1|1|1) FN1700-S.SNP.12:24865141 chr12:024865141 0 W/24865141-24865141 FN1700-S SNP G -> A AC=1;AN=186;BQB=0.134943;DP=3921;DP4=1924,1957,8,15;HOB=5.78101e-05;ICB=0.000116242;MQ=49;MQ0F=0.00102015;MQB=3.40628e-07;MQSB=0.933467;RPB=0.190641;SGB=-38.7347;VDB=0.269029;EFF=INTERGENIC(MODIFIER||||||||||1) FN2388.SNP.12:24868153 chr12:024868153 0 W/24868153-24868153 FN2388 SNP C -> T AC=1;AN=200;BQB=0.48181;DP=5126;DP4=2530,2288,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.91586e-14;MQSB=0.989967;RPB=0.991359;SGB=76.3213;VDB=0.378569;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.12:24869881 chr12:024869881 0 W/24869881-24869881 FN2188-S SNP C -> T AC=2;AN=190;BQB=0.839797;DP=4618;DP4=2286,2043,25,15;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000216544;MQB=1.58098e-18;MQSB=0.79006;RPB=0.92346;SGB=176.604;VDB=0.411766;EFF=INTERGENIC(MODIFIER||||||||||1) FN852-S.SNP.12:24883047 chr12:024883047 0 W/24883047-24883047 FN852-S Single Base Substitution A-G SYNONYMOUS_CODING HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN3366-S.SNP.12:24885291 chr12:024885291 0 W/24885291-24885291 FN3366-S SNP C -> A AC=1;AN=184;BQB=0.978105;DP=3466;DP4=1999,1383,9,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.18927e-07;MQSB=0.821058;RPB=0.853751;SGB=48.7425;VDB=0.118129;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGg/gTg|G97V|459|LOC_Os12g40200|protein_coding|CODING|LOC_Os12g40200.1|1|1) FN482-S.SNP.12:24907184 chr12:024907184 0 W/24907184-24907184 FN482-S Single Base Substitution C-T SYNONYMOUS_CODING HOMO SNo: 480, Mutant_ID: FN482-S, Generation: M2, Mutations: 63, Genes: 11, Seed availability: Yes. FN2108-S.SNP.12:24907714 chr12:024907714 0 W/24907714-24907714 FN2108-S SNP C -> G AC=1;AN=168;BQB=0.735655;DP=1880;DP4=1450,392,14,5;HOB=7.08617e-05;ICB=0.000142567;MQ=41;MQ0F=0.0234043;MQB=1.19594e-05;MQSB=0.0129902;RPB=0.806453;SGB=8.48315;VDB=0.214461;EFF=INTERGENIC(MODIFIER||||||||||1) FN443-S.SNP.12:24907969 chr12:024907969 0 W/24907969-24907969 FN443-S Single Base Substitution T-C INTERGENIC HET SNo: 442, Mutant_ID: FN443-S, Generation: M2, Mutations: 60, Genes: 34, Seed availability: Yes. FN4002-S.SNP.12:24912505 chr12:024912505 0 W/24912505-24912505 FN4002-S SNP C -> T AC=1;AN=168;BQB=0.901133;DP=2482;DP4=1295,1086,5,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.87939e-10;MQSB=0.8698;RPB=0.814824;SGB=48.4712;VDB=0.0851372;EFF=INTERGENIC(MODIFIER||||||||||1) FN4002-S.SNP.12:24912506 chr12:024912506 0 W/24912506-24912506 FN4002-S SNP G -> T AC=1;AN=168;BQB=0.827765;DP=2483;DP4=1282,1053,5,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.27495e-11;MQSB=0.892163;RPB=0.802735;SGB=51.902;VDB=0.0803026;EFF=INTERGENIC(MODIFIER||||||||||1) FN3377-S.SNP.12:24913138 chr12:024913138 0 W/24913138-24913138 FN3377-S SNP T -> A AC=2;AN=184;BQB=0.578637;DP=3492;DP4=1497,1872,10,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=8.68361e-12;MQSB=0.982102;RPB=0.570983;SGB=51.0148;VDB=0.160226;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.12:24918825 chr12:024918825 0 W/24918825-24918825 FN3358-S SNP G -> A AC=1;AN=184;BQB=0.714203;DP=3391;DP4=1464,1764,13,11;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.08707e-14;MQSB=0.999539;RPB=0.352266;SGB=17.4548;VDB=0.186035;EFF=INTERGENIC(MODIFIER||||||||||1) FN3358-S.SNP.12:24918826 chr12:024918826 0 W/24918826-24918826 FN3358-S SNP G -> T AC=1;AN=184;BQB=0.910625;DP=3383;DP4=1462,1792,11,10;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=8.76603e-14;MQSB=0.995922;RPB=0.298954;SGB=89.4385;VDB=0.325077;EFF=INTERGENIC(MODIFIER||||||||||1) FN2540-S.SNP.12:24921888 chr12:024921888 0 W/24921888-24921888 FN2540-S SNP G -> T AC=1;AN=198;BQB=0.568735;DP=3974;DP4=2098,1682,8,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.62604e-11;MQSB=0.996606;RPB=0.791466;SGB=15.7299;VDB=0.985426;EFF=INTERGENIC(MODIFIER||||||||||1) FN-113.SNP.12:24926461 chr12:024926461 0 W/24926461-24926461 FN-113 Single Base Substitution C-T STOP_GAINED HET LOC_Os12g40279 protein kinase domain containing protein, expressed SNo: 113, Mutant_ID: FN-113, Generation: M2, Mutations: 47, Genes: 111, Seed availability: Yes. FN3828-S.SNP.12:24932848 chr12:024932848 0 W/24932848-24932848 FN3828-S SNP T -> A AC=1;AN=190;BQB=0.992599;DP=2601;DP4=1303,1208,4,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=8.6237e-07;MQSB=0.959152;RPB=0.779852;SGB=25.439;VDB=0.935066;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D1598E|4262|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.1|10|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gaT/gaA|D1598E|3117|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.2|10|1) FN1203-S.SNP.12:24936367 chr12:024936367 0 W/24936367-24936367 FN1203-S Single Base Substitution A-C NON_SYNONYMOUS_CODING HET LOC_Os12g40279 protein kinase domain containing protein, expressed SNo: 1034, Mutant_ID: FN1203-S, Generation: M2, Mutations: 56, Genes: 224, Seed availability: Yes. FN-78.SNP.12:24939277 chr12:024939277 0 W/24939277-24939277 FN-78 Single Base Substitution G-T INTRON HOMO SNo: 78, Mutant_ID: FN-78, Generation: M2, Mutations: 49, Genes: 17, Seed availability: Yes. FN3909-S.SNP.12:24940500 chr12:024940500 0 W/24940500-24940500 FN3909-S SNP T -> C AC=1;AN=158;BQB=0.712211;DP=2270;DP4=1102,1096,3,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=4.36365e-06;MQSB=0.994294;RPB=0.984209;SGB=42.6978;VDB=0.680085;EFF=INTRON(MODIFIER||||4262|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.1|25|1),INTRON(MODIFIER||||3117|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.2|25|1) FN2295.SNP.12:24946185 chr12:024946185 0 W/24946185-24946185 FN2295 SNP T -> A AC=1;AN=192;BQB=0.988409;DP=4853;DP4=2409,2191,16,7;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000206058;MQB=5.16759e-15;MQSB=0.926224;RPB=0.916551;SGB=71.8591;VDB=0.594895;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gAt|V3280D|4262|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.1|40|1) FN2295.SNP.12:24946186 chr12:024946186 0 W/24946186-24946186 FN2295 SNP T -> A AC=1;AN=192;BQB=0.917859;DP=4870;DP4=2391,2209,16,11;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0.000205339;MQB=5.69417e-15;MQSB=0.982878;RPB=0.687266;SGB=-8.56084;VDB=0.860822;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtT/gtA|V3280|4262|LOC_Os12g40279|protein_coding|CODING|LOC_Os12g40279.1|40|1) FN-4.SNP.12:24947361 chr12:024947361 0 W/24947361-24947361 FN-4 Single Base Substitution G-A NON_SYNONYMOUS_CODING Homo LOC_Os12g40279 protein kinase domain containing protein, expressed SNo: 4, Mutant_ID: FN-4, Generation: M2, Mutations: 32, Genes: 26, Seed availability: Yes. FN-289.SNP.12:24947538 chr12:024947538 0 W/24947538-24947538 FN-289 Single Base Substitution A-C NON_SYNONYMOUS_CODING HOMO LOC_Os12g40279 protein kinase domain containing protein, expressed SNo: 285, Mutant_ID: FN-289, Generation: M2, Mutations: 56, Genes: 18, Seed availability: No. FN4094-S.SNP.12:24951181 chr12:024951181 0 W/24951181-24951181 FN4094-S SNP T -> A AC=1;AN=182;BQB=0.950388;DP=3062;DP4=1371,1560,9,13;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=1.57489e-12;MQSB=0.987238;RPB=0.921221;SGB=40.7201;VDB=0.861286;EFF=INTERGENIC(MODIFIER||||||||||1) FN945-S.SNP.12:24951212 chr12:024951212 0 W/24951212-24951212 FN945-S Single Base Substitution A-T INTERGENIC HET SNo: 851, Mutant_ID: FN945-S, Generation: M2, Mutations: 48, Genes: 5, Seed availability: Yes. FN-143.SNP.12:24952481 chr12:024952481 0 W/24952481-24952481 FN-143 Single Base Substitution G-A INTERGENIC HET SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN3658-S.SNP.12:24952601 chr12:024952601 0 W/24952601-24952601 FN3658-S SNP C -> T AC=1;AN=190;BQB=0.999146;DP=2702;DP4=1219,1339,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.00954e-07;MQSB=0.798975;RPB=0.850799;SGB=44.5415;VDB=0.510754;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.12:24957399 chr12:024957399 0 W/24957399-24957399 FN1221-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2305.SNP.12:24961824 chr12:024961824 0 W/24961824-24961824 FN2305 SNP G -> A AC=1;AN=192;BQB=0.859264;DP=4767;DP4=2641,1911,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.99029e-09;MQSB=0.908457;RPB=0.456077;SGB=28.9139;VDB=0.719323;EFF=INTERGENIC(MODIFIER||||||||||1) FN2259-S.SNP.12:24961832 chr12:024961832 0 W/24961832-24961832 FN2259-S SNP G -> A AC=1;AN=190;BQB=0.351343;DP=4415;DP4=2244,1832,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.00227341;MQSB=0.899923;RPB=0.0376;SGB=25.439;VDB=0.799415;EFF=INTERGENIC(MODIFIER||||||||||1) FN430-S.SNP.12:24962269 chr12:024962269 0 W/24962269-24962269 FN430-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 429, Mutant_ID: FN430-S, Generation: M2, Mutations: 83, Genes: 90, Seed availability: Yes. FN2380.SNP.12:24963518 chr12:024963518 0 W/24963518-24963518 FN2380 SNP A -> C AC=1;AN=192;BQB=0.772032;DP=4331;DP4=1884,2171,10,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.615e-15;MQSB=0.945705;RPB=0.807521;SGB=22.9983;VDB=0.360734;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caA/caC|Q488H|609|LOC_Os12g40310|protein_coding|CODING|LOC_Os12g40310.1|2|1) 705-1.SNP.12:24971215 chr12:024971215 0 W/24971215-24971215 705-1 Single Base Substitution G-A INTERGENIC HET SNo: 1461, Mutant_ID: 705-1, Generation: M2, Mutations: 36, Genes: 8, Seed availability: Yes. 705-3.SNP.12:24971215 chr12:024971215 0 W/24971215-24971215 705-3 Single Base Substitution G-A INTERGENIC Homo SNo: 1463, Mutant_ID: 705-3, Generation: M2, Mutations: 33, Genes: 40, Seed availability: Yes. FN3401-S.SNP.12:24972833 chr12:024972833 0 W/24972833-24972833 FN3401-S SNP A -> G AC=1;AN=184;BQB=0.764749;DP=3146;DP4=1505,1518,4,7;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=4.49169e-06;MQSB=0.812992;RPB=0.464273;SGB=28.7043;VDB=0.41544;EFF=INTERGENIC(MODIFIER||||||||||1) FN2333.SNP.12:24984703 chr12:024984703 0 W/24984703-24984703 FN2333 SNP T -> C AC=1;AN=192;BQB=0.769966;DP=4640;DP4=2071,2258,11,14;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.47871e-14;MQSB=0.852651;RPB=0.598364;SGB=-9.68954;VDB=0.422819;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAg/aGg|K457R|530|LOC_Os12g40350|protein_coding|CODING|LOC_Os12g40350.1|3|1) FN3510-S.SNP.12:24988289 chr12:024988289 0 W/24988289-24988289 FN3510-S SNP G -> A AC=2;AN=188;BQB=0.921245;DP=4140;DP4=1797,2234,16,23;HOB=0.0210502;ICB=0.494738;MQ=33;MQ0F=0.0521739;MQB=0.0772018;MQSB=0;RPB=0.785929;SGB=171.648;VDB=0.929339;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.12:25005644 chr12:025005644 0 W/25005644-25005644 FN-129 Single Base Substitution G-T INTRON HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN3363-S.SNP.12:25005644 chr12:025005644 0 W/25005644-25005644 FN3363-S SNP G -> T AC=1;AN=184;BQB=0.962313;DP=2604;DP4=1150,1366,8,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.64233e-10;MQSB=0.954378;RPB=0.892974;SGB=46.3132;VDB=0.782052;EFF=INTRON(MODIFIER||||255|LOC_Os12g40390|protein_coding|CODING|LOC_Os12g40390.1|2|1) FN417-S.SNP.12:25005644 chr12:025005644 0 W/25005644-25005644 FN417-S Single Base Substitution G-T INTRON HET SNo: 416, Mutant_ID: FN417-S, Generation: M2, Mutations: 59, Genes: 59, Seed availability: Yes. FN561-S.SNP.12:25005644 chr12:025005644 0 W/25005644-25005644 FN561-S Single Base Substitution G-T INTRON HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN619-S.SNP.12:25005644 chr12:025005644 0 W/25005644-25005644 FN619-S Single Base Substitution G-T INTRON HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN1509-S.SNP.12:25006584 chr12:025006584 0 W/25006584-25006584 FN1509-S Single Base Substitution G-A INTRON HET SNo: 1264, Mutant_ID: FN1509-S, Generation: M2, Mutations: 111, Genes: 17, Seed availability: Yes. FN4138-S.SNP.12:25011739 chr12:025011739 0 W/25011739-25011739 FN4138-S SNP G -> A AC=2;AN=170;BQB=0.943679;DP=2472;DP4=1170,1230,7,16;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.26623e-12;MQSB=0.990413;RPB=0.296133;SGB=96.7413;VDB=0.669689;EFF=INTERGENIC(MODIFIER||||||||||1) FN3921-S.SNP.12:25012365 chr12:025012365 0 W/25012365-25012365 FN3921-S SNP C -> T AC=1;AN=158;BQB=0.78856;DP=2761;DP4=1562,1109,8,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.737e-07;MQSB=0.945232;RPB=0.515805;SGB=60.1755;VDB=0.74512;EFF=INTERGENIC(MODIFIER||||||||||1) FN3827-S.SNP.12:25013920 chr12:025013920 0 W/25013920-25013920 FN3827-S SNP C -> T AC=1;AN=190;BQB=0.904836;DP=2523;DP4=1238,1139,10,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.36846e-07;MQSB=0.916551;RPB=0.368659;SGB=62.7569;VDB=0.448688;EFF=INTERGENIC(MODIFIER||||||||||1) FN714-S.SNP.12:25018053 chr12:025018053 0 W/25018053-25018053 FN714-S Single Base Substitution G-T INTRON HOMO SNo: 643, Mutant_ID: FN714-S, Generation: M2, Mutations: 74, Genes: 15, Seed availability: Yes. FN829-S.SNP.12:25034866 chr12:025034866 0 W/25034866-25034866 FN829-S Single Base Substitution C-G INTERGENIC HOMO SNo: 742, Mutant_ID: FN829-S, Generation: M2, Mutations: 53, Genes: 42, Seed availability: Yes. FN789-S.SNP.12:25035486 chr12:025035486 0 W/25035486-25035486 FN789-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g40460 zinc finger, C3HC4 type domain containing protein, expressed SNo: 709, Mutant_ID: FN789-S, Generation: M2, Mutations: 61, Genes: 156, Seed availability: Yes. FN2467.SNP.12:25038381 chr12:025038381 0 W/25038381-25038381 FN2467 SNP A -> C AC=2;AN=200;BQB=0.911347;DP=5033;DP4=2328,2313,29,28;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.24691e-31;MQSB=0.782881;RPB=0.150567;SGB=195.292;VDB=0.0837276;EFF=INTERGENIC(MODIFIER||||||||||1) FN3462-S.SNP.12:25049654 chr12:025049654 0 W/25049654-25049654 FN3462-S SNP C -> T AC=2;AN=184;BQB=0.300083;DP=3475;DP4=1922,1434,19,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.4299e-15;MQSB=0.894688;RPB=0.651053;SGB=170.831;VDB=0.793862;EFF=INTERGENIC(MODIFIER||||||||||1) FN-335.SNP.12:25050252 chr12:025050252 0 W/25050252-25050252 FN-335 Single Base Substitution G-A INTERGENIC HET SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN1590-S.SNP.12:25059169 chr12:025059169 0 W/25059169-25059169 FN1590-S Single Base Substitution T-C INTRON HET SNo: 1321, Mutant_ID: FN1590-S, Generation: M2, Mutations: 70, Genes: 42, Seed availability: Yes. FN-145.SNP.12:25061289 chr12:025061289 0 W/25061289-25061289 FN-145 Single Base Substitution T-C INTERGENIC HET SNo: 145, Mutant_ID: FN-145, Generation: M2, Mutations: 56, Genes: 49, Seed availability: Yes. FN2300.SNP.12:25062617 chr12:025062617 0 W/25062617-25062617 FN2300 SNP G -> T AC=2;AN=192;BQB=0.112457;DP=5056;DP4=2057,2498,15,37;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=2.48663e-23;MQSB=0.783978;RPB=0.00299509;SGB=-616.603;VDB=0.811761;EFF=INTERGENIC(MODIFIER||||||||||1) FN3525-S.SNP.12:25064050 chr12:025064050 0 W/25064050-25064050 FN3525-S SNP T -> C AC=1;AN=188;BQB=0.99684;DP=2643;DP4=1150,1358,5,6;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.89126e-06;MQSB=0.985401;RPB=0.794642;SGB=13.3597;VDB=0.861107;EFF=INTRON(MODIFIER||||225|LOC_Os12g40510|protein_coding|CODING|LOC_Os12g40510.1|3|1) FN3365-S.SNP.12:25066007 chr12:025066007 0 W/25066007-25066007 FN3365-S SNP C -> G AC=1;AN=184;BQB=0.995644;DP=2514;DP4=1133,1287,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.60295e-09;MQSB=0.993518;RPB=0.889478;SGB=57.786;VDB=0.147066;EFF=INTRON(MODIFIER||||225|LOC_Os12g40510|protein_coding|CODING|LOC_Os12g40510.1|6|1) W554-1-1.SNP.12:25071939 chr12:025071939 0 W/25071939-25071939 W554-1-1 Single Base Substitution C-T INTRON HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. W554-1-1.SNP.12:25071940 chr12:025071940 0 W/25071940-25071940 W554-1-1 Single Base Substitution C-T INTRON HOMO SNo: 1428, Mutant_ID: W554-1-1, Generation: M2, Mutations: 52, Genes: 55, Seed availability: Yes. FN2472.SNP.12:25074158 chr12:025074158 0 W/25074158-25074158 FN2472 SNP A -> G AC=1;AN=200;BQB=0.950742;DP=5037;DP4=2496,2236,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=8.67532e-13;MQSB=0.968778;RPB=0.988547;SGB=123.342;VDB=0.260401;EFF=INTRON(MODIFIER||||1137|LOC_Os12g40520|protein_coding|CODING|LOC_Os12g40520.1|8|1) FN887-S.SNP.12:25078074 chr12:025078074 0 W/25078074-25078074 FN887-S Single Base Substitution T-G INTERGENIC HET SNo: 793, Mutant_ID: FN887-S, Generation: M2, Mutations: 72, Genes: 83, Seed availability: No. FN2689-S.SNP.12:25081286 chr12:025081286 0 W/25081286-25081286 FN2689-S SNP G -> A AC=1;AN=200;BQB=0.87982;DP=4582;DP4=2138,2164,3,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.43669e-09;MQSB=0.992275;RPB=0.104671;SGB=58.8698;VDB=0.224506;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cGa/cAa|R586Q|749|LOC_Os12g40530|protein_coding|CODING|LOC_Os12g40530.1|2|1) FN2388.SNP.12:25084838 chr12:025084838 0 W/25084838-25084838 FN2388 SNP T -> G AC=1;AN=200;BQB=0.997401;DP=4739;DP4=2154,2264,20,15;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=7.80192e-21;MQSB=0.969438;RPB=0.999535;SGB=155.578;VDB=0.239851;EFF=INTRON(MODIFIER||||497|LOC_Os12g40540|protein_coding|CODING|LOC_Os12g40540.1|2|1),INTRON(MODIFIER||||456|LOC_Os12g40540|protein_coding|CODING|LOC_Os12g40540.2|2|1) FN2557-S.SNP.12:25087954 chr12:025087954 0 W/25087954-25087954 FN2557-S SNP T -> A AC=2;AN=198;BQB=0.945636;DP=4343;DP4=2014,2094,18,19;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=3.04212e-19;MQSB=0.999955;RPB=0.748532;SGB=164.427;VDB=0.722793;EFF=STOP_GAINED(HIGH|NONSENSE|Aag/Tag|K424*|484|LOC_Os12g40550|protein_coding|CODING|LOC_Os12g40550.1|10|1);LOF=(LOC_Os12g40550|LOC_Os12g40550|1|1.00);NMD=(LOC_Os12g40550|LOC_Os12g40550|1|1.00) FN3485-S.SNP.12:25104465 chr12:025104465 0 W/25104465-25104465 FN3485-S SNP G -> A AC=2;AN=184;BQB=0.998931;DP=2990;DP4=1202,1676,14,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.36188e-19;MQSB=0.855997;RPB=0.215803;SGB=116.749;VDB=0.515416;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.12:25107234 chr12:025107234 0 W/25107234-25107234 FN2377 SNP A -> G AC=1;AN=192;BQB=0.989876;DP=4913;DP4=2458,2183,15,17;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=2.62218e-20;MQSB=0.985963;RPB=0.903066;SGB=30.82;VDB=0.206353;EFF=INTERGENIC(MODIFIER||||||||||1) FN2377.SNP.12:25107235 chr12:025107235 0 W/25107235-25107235 FN2377 SNP G -> A AC=1;AN=192;BQB=0.99477;DP=4903;DP4=2506,2167,12,15;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.74812e-17;MQSB=0.998441;RPB=0.95584;SGB=117.676;VDB=0.207374;EFF=INTERGENIC(MODIFIER||||||||||1) FN3546-S.SNP.12:25107608 chr12:025107608 0 W/25107608-25107608 FN3546-S SNP G -> A AC=1;AN=188;BQB=0.93587;DP=2861;DP4=1363,1401,4,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.000201675;MQSB=0.955904;RPB=0.103258;SGB=30.8063;VDB=0.0633369;EFF=INTERGENIC(MODIFIER||||||||||1) FN3981-S.SNP.12:25107863 chr12:025107863 0 W/25107863-25107863 FN3981-S SNP A -> C AC=2;AN=168;BQB=0.991457;DP=2457;DP4=1221,1139,13,11;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=3.95105e-13;MQSB=0.991892;RPB=0.36632;SGB=72.4869;VDB=0.175494;EFF=INTERGENIC(MODIFIER||||||||||1) FN_543-2-6.SNP.12:25109336 chr12:025109336 0 W/25109336-25109336 FN_543-2-6 Single Base Substitution T-C HET SNo: 1425, Mutant_ID: FN_543-2-6, Generation: M3, Mutations: 64, Genes: 9, Seed availability: Yes. FN1531-S.SNP.12:25110381 chr12:025110381 0 W/25110381-25110381 FN1531-S Single Base Substitution T-A INTERGENIC HET SNo: 1281, Mutant_ID: FN1531-S, Generation: M2, Mutations: 74, Genes: 16, Seed availability: No. FN1602-S.SNP.12:25116628 chr12:025116628 0 W/25116628-25116628 FN1602-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g40590 helix-loop-helix DNA-binding domain containing protein, expressed SNo: 1324, Mutant_ID: FN1602-S, Generation: M2, Mutations: 84, Genes: 20, Seed availability: Yes. FN-248.SNP.12:25117185 chr12:025117185 0 W/25117185-25117185 FN-248 Single Base Substitution T-C INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN2488.SNP.12:25117424 chr12:025117424 0 W/25117424-25117424 FN2488 SNP T -> G AC=1;AN=200;BQB=0.612066;DP=4991;DP4=2157,2506,15,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.02083e-19;MQSB=0.596595;RPB=0.905342;SGB=35.1726;VDB=0.726682;EFF=INTRON(MODIFIER||||265|LOC_Os12g40590|protein_coding|CODING|LOC_Os12g40590.1|3|1) FN2599-S.SNP.12:25118532 chr12:025118532 0 W/25118532-25118532 FN2599-S SNP A -> G AC=1;AN=198;BQB=0.989275;DP=4585;DP4=2111,2208,11,6;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000218103;MQB=9.27863e-11;MQSB=0.996838;RPB=0.898487;SGB=50.9344;VDB=0.175684;EFF=INTRON(MODIFIER||||265|LOC_Os12g40590|protein_coding|CODING|LOC_Os12g40590.1|5|1) FN722-S.SNP.12:25123812 chr12:025123812 0 W/25123812-25123812 FN722-S Single Base Substitution T-A INTERGENIC HOMO SNo: 647, Mutant_ID: FN722-S, Generation: M2, Mutations: 67, Genes: 119, Seed availability: Yes. FN2621-S.SNP.12:25123908 chr12:025123908 0 W/25123908-25123908 FN2621-S SNP T -> C AC=1;AN=200;BQB=0.998385;DP=5115;DP4=2595,2279,16,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.22438e-18;MQSB=0.999674;RPB=0.999713;SGB=36.7778;VDB=0.948298;EFF=INTERGENIC(MODIFIER||||||||||1) FN2435.SNP.12:25124708 chr12:025124708 0 W/25124708-25124708 FN2435 SNP A -> C AC=1;AN=200;BQB=0.921154;DP=4506;DP4=2741,1587,14,4;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.9485e-10;MQSB=0.715074;RPB=0.807687;SGB=54.6902;VDB=0.298154;EFF=INTERGENIC(MODIFIER||||||||||1) FN3115-S.SNP.12:25128479 chr12:025128479 0 W/25128479-25128479 FN3115-S SNP G -> C AC=1;AN=184;BQB=0.996366;DP=2881;DP4=1388,1420,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=47;MQ0F=0.013537;MQB=2.0417e-07;MQSB=0.000507075;RPB=0.992314;SGB=46.3132;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN3396-S.SNP.12:25134919 chr12:025134919 0 W/25134919-25134919 FN3396-S SNP T -> C AC=1;AN=184;BQB=0.83108;DP=2972;DP4=1465,1438,10,3;HOB=5.90737e-05;ICB=0.00011879;MQ=43;MQ0F=0.0622476;MQB=0.0307153;MQSB=0.0018731;RPB=0.780199;SGB=53.2642;VDB=0.24956;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAg/cGg|Q811R|947|LOC_Os12g40610|protein_coding|CODING|LOC_Os12g40610.1|2|1) FN2588-S.SNP.12:25135952 chr12:025135952 0 W/25135952-25135952 FN2588-S SNP T -> G AC=1;AN=198;BQB=0.474698;DP=3882;DP4=1896,1692,8,12;HOB=5.10152e-05;ICB=0.000102546;MQ=31;MQ0F=0.235446;MQB=0.969877;MQSB=0.00181644;RPB=0.182909;SGB=37.1297;VDB=0.438189;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agc/Cgc|S467R|947|LOC_Os12g40610|protein_coding|CODING|LOC_Os12g40610.1|2|1) FN1304-S.SNP.12:25138079 chr12:025138079 0 W/25138079-25138079 FN1304-S Single Base Substitution C-T INTERGENIC HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN2234-S.SNP.12:25139063 chr12:025139063 0 W/25139063-25139063 FN2234-S SNP G -> A AC=1;AN=190;BQB=0.510341;DP=4658;DP4=2101,2270,12,2;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000214684;MQB=1.30566e-07;MQSB=0.990629;RPB=0.743098;SGB=39.6545;VDB=0.778595;EFF=INTERGENIC(MODIFIER||||||||||1) FN2536-S.SNP.12:25142058 chr12:025142058 0 W/25142058-25142058 FN2536-S SNP C -> T AC=1;AN=198;BQB=0.894226;DP=3952;DP4=1909,1876,11,7;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.96898e-11;MQSB=0.989717;RPB=0.946811;SGB=31.9395;VDB=0.437432;EFF=INTERGENIC(MODIFIER||||||||||1) FN545-S.SNP.12:25146003 chr12:025146003 0 W/25146003-25146003 FN545-S Single Base Substitution A-T INTRON HOMO SNo: 541, Mutant_ID: FN545-S, Generation: M2, Mutations: 71, Genes: 16, Seed availability: Yes. FN3057-S.SNP.12:25147276 chr12:025147276 0 W/25147276-25147276 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.968204;DP=2805;DP4=1482,1250,3,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.17922e-05;MQSB=0.858205;RPB=0.719103;SGB=18.1394;VDB=0.44307;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCc/aTc|T204I|249|LOC_Os12g40630|protein_coding|CODING|LOC_Os12g40630.1|6|1) FN3057-S.SNP.12:25147277 chr12:025147277 0 W/25147277-25147277 FN3057-S SNP C -> T AC=1;AN=184;BQB=0.960668;DP=2801;DP4=1468,1260,4,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=3.11355e-06;MQSB=0.864276;RPB=0.697134;SGB=21.6609;VDB=0.319249;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T204|249|LOC_Os12g40630|protein_coding|CODING|LOC_Os12g40630.1|6|1) FN988-S.SNP.12:25154838 chr12:025154838 0 W/25154838-25154838 FN988-S Single Base Substitution C-T INTERGENIC HOMO SNo: 892, Mutant_ID: FN988-S, Generation: M2, Mutations: 67, Genes: 14, Seed availability: Yes. FN1619-S.SNP.12:25155415 chr12:025155415 0 W/25155415-25155415 FN1619-S Single Base Substitution G-T INTERGENIC Homo SNo: 1332, Mutant_ID: FN1619-S, Generation: M2, Mutations: 98, Genes: 21, Seed availability: Yes. FN1016-S.SNP.12:25159584 chr12:025159584 0 W/25159584-25159584 FN1016-S Single Base Substitution A-G INTERGENIC HET SNo: 915, Mutant_ID: FN1016-S, Generation: M2, Mutations: 15, Genes: 0, Seed availability: Yes. FN-278.SNP.12:25170572 chr12:025170572 0 W/25170572-25170572 FN-278 Single Base Substitution G-A INTRON HET SNo: 275, Mutant_ID: FN-278, Generation: M2, Mutations: 86, Genes: 15, Seed availability: Yes. FN764-S.SNP.12:25172760 chr12:025172760 0 W/25172760-25172760 FN764-S Single Base Substitution A-T INTERGENIC HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1462-S.SNP.12:25173153 chr12:025173153 0 W/25173153-25173153 FN1462-S Single Base Substitution G-A INTERGENIC HET SNo: 1230, Mutant_ID: FN1462-S, Generation: M2, Mutations: 78, Genes: 15, Seed availability: Yes. FN3760-S.SNP.12:25179719 chr12:025179719 0 W/25179719-25179719 FN3760-S SNP C -> T AC=1;AN=190;BQB=0.998872;DP=2584;DP4=1110,1399,9,3;HOB=5.54017e-05;ICB=0.000111386;MQ=43;MQ0F=0.0170279;MQB=0.073416;MQSB=7.40022e-07;RPB=0.990854;SGB=32.5467;VDB=0.200231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R275C|540|LOC_Os12g40670|protein_coding|CODING|LOC_Os12g40670.1|2|1) FN1229-S.SNP.12:25180483 chr12:025180483 0 W/25180483-25180483 FN1229-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g40670 retrotransposon protein, putative, unclassified, expressed SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN3332-S.SNP.12:25181802 chr12:025181802 0 W/25181802-25181802 FN3332-S SNP G -> T AC=1;AN=184;BQB=0.988644;DP=5522;DP4=2631,2767,14,8;HOB=5.90737e-05;ICB=0.00011879;MQ=15;MQ0F=0.41561;MQB=0.0700035;MQSB=1.73059e-12;RPB=0.453434;SGB=14.4113;VDB=0.991682;EFF=INTERGENIC(MODIFIER||||||||||1) FN2419.SNP.12:25184756 chr12:025184756 0 W/25184756-25184756 FN2419 SNP G -> A AC=1;AN=200;BQB=0.0607789;DP=4063;DP4=1624,2205,13,17;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.00689146;MQB=0.184433;MQSB=0.392581;RPB=0.682511;SGB=97.9523;VDB=0.200231;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gag/Aag|E184K|570|LOC_Os12g40680|protein_coding|CODING|LOC_Os12g40680.1|2|1) FN3820-S.SNP.12:25185069 chr12:025185069 0 W/25185069-25185069 FN3820-S SNP C -> T AC=2;AN=190;BQB=0.141939;DP=2675;DP4=1083,1504,9,14;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0.0160748;MQB=0.000351067;MQSB=0.998692;RPB=0.888271;SGB=44.0907;VDB=0.896684;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A288V|570|LOC_Os12g40680|protein_coding|CODING|LOC_Os12g40680.1|2|1) FN3631-S.SNP.12:25187538 chr12:025187538 0 W/25187538-25187538 FN3631-S SNP G -> A AC=1;AN=190;BQB=0.991972;DP=2916;DP4=1125,1717,8,5;HOB=5.54017e-05;ICB=0.000111386;MQ=28;MQ0F=0.240055;MQB=0.489096;MQSB=0;RPB=0.580942;SGB=36.1006;VDB=0.214563;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G1471|1770|LOC_Os12g40690|protein_coding|CODING|LOC_Os12g40690.1|6|1) FN2129-S.SNP.12:25191985 chr12:025191985 0 W/25191985-25191985 FN2129-S SNP C -> A AC=2;AN=168;BQB=0.334732;DP=1502;DP4=646,735,9,9;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0579228;MQB=0.00259858;MQSB=0;RPB=0.2235;SGB=7.05233;VDB=0.0391228;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gcc/Tcc|A151S|1770|LOC_Os12g40690|protein_coding|CODING|LOC_Os12g40690.1|1|1) FN2129-S.SNP.12:25191986 chr12:025191986 0 W/25191986-25191986 FN2129-S SNP C -> T AC=2;AN=168;BQB=0.890233;DP=1496;DP4=645,732,8,9;HOB=0.0235261;ICB=0.494119;MQ=38;MQ0F=0.0581551;MQB=0.00181909;MQSB=0;RPB=0.169222;SGB=27.0464;VDB=0.0335674;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcA|A150|1770|LOC_Os12g40690|protein_coding|CODING|LOC_Os12g40690.1|1|1) FN3824-S.SNP.12:25195887 chr12:025195887 0 W/25195887-25195887 FN3824-S SNP G -> A AC=1;AN=190;BQB=0.664812;DP=2712;DP4=1252,1367,7,9;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.000737463;MQB=1.31102e-06;MQSB=0.938018;RPB=0.575064;SGB=67.3108;VDB=0.0495856;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aCg/aTg|T644M|1040|LOC_Os12g40700|protein_coding|CODING|LOC_Os12g40700.1|3|1) FN3495-S.SNP.12:25198545 chr12:025198545 0 W/25198545-25198545 FN3495-S SNP T -> A AC=2;AN=188;BQB=0.999441;DP=3118;DP4=1384,1514,10,20;HOB=0.0210502;ICB=0.494738;MQ=47;MQ0F=0.00160359;MQB=1.0399e-07;MQSB=0.708296;RPB=0.834394;SGB=61.6823;VDB=0.781198;EFF=INTERGENIC(MODIFIER||||||||||1) FN1670-S.SNP.12:25200231 chr12:025200231 0 W/25200231-25200231 FN1670-S SNP A -> G AC=1;AN=188;BQB=0.109762;DP=3757;DP4=1845,1882,8,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.89137e-07;MQSB=1;RPB=0.932379;SGB=-35.9944;VDB=0.0863944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3597-S.SNP.12:25201583 chr12:025201583 0 W/25201583-25201583 FN3597-S SNP G -> T AC=2;AN=188;BQB=0.797958;DP=2515;DP4=1147,1250,8,14;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.88206e-10;MQSB=0.927114;RPB=0.9793;SGB=94.4119;VDB=0.497426;EFF=INTERGENIC(MODIFIER||||||||||1) FN654-S.SNP.12:25212851 chr12:025212851 0 W/25212851-25212851 FN654-S Single Base Substitution G-A INTERGENIC HET SNo: 599, Mutant_ID: FN654-S, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN409-S.SNP.12:25214449 chr12:025214449 0 W/25214449-25214449 FN409-S Single Base Substitution C-T INTERGENIC HET SNo: 405, Mutant_ID: FN409-S, Generation: M2, Mutations: 61, Genes: 10, Seed availability: Yes. W426-1-1.SNP.12:25232177 chr12:025232177 0 W/25232177-25232177 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. FN3809-S.SNP.12:25235170 chr12:025235170 0 W/25235170-25235170 FN3809-S SNP G -> C AC=1;AN=190;BQB=0.906194;DP=2638;DP4=1086,1426,5,4;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.22583e-06;MQSB=0.634435;RPB=0.788924;SGB=35.4339;VDB=0.149896;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Cgc|G36R|209|LOC_Os12g40760|protein_coding|CODING|LOC_Os12g40760.1|1|1) FN-335.SNP.12:25250301 chr12:025250301 0 W/25250301-25250301 FN-335 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g40790 zinc finger family protein, putative, expressed SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN2765-S.SNP.12:25259106 chr12:025259106 0 W/25259106-25259106 FN2765-S SNP G -> A AC=1;AN=198;BQB=0.984572;DP=4205;DP4=2079,1939,11,16;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0834721;MQB=0.725176;MQSB=0.240959;RPB=0.308729;SGB=86.8856;VDB=0.577207;EFF=INTERGENIC(MODIFIER||||||||||1) FN1684-S.SNP.12:25261065 chr12:025261065 0 W/25261065-25261065 FN1684-S SNP G -> T AC=2;AN=188;BQB=0.818869;DP=1414;DP4=584,791,5,10;HOB=0.0210502;ICB=0.494738;MQ=26;MQ0F=0.211457;MQB=0.598182;MQSB=0.791439;RPB=0.899272;SGB=23.5329;VDB=0.105804;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Tgc|G457C|1908|LOC_Os12g40810|protein_coding|CODING|LOC_Os12g40810.1|1|1) FN3821-S.SNP.12:25263309 chr12:025263309 0 W/25263309-25263309 FN3821-S SNP A -> T AC=2;AN=190;BQB=0.994792;DP=3091;DP4=1651,1315,13,9;HOB=0.020831;ICB=0.494793;MQ=34;MQ0F=0.142025;MQB=0.620899;MQSB=1.48857e-10;RPB=0.914069;SGB=68.0854;VDB=0.140521;EFF=INTRON(MODIFIER||||1908|LOC_Os12g40810|protein_coding|CODING|LOC_Os12g40810.1|2|1) FN-341.SNP.12:25266943 chr12:025266943 0 W/25266943-25266943 FN-341 Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g40820 retrotransposon protein, putative, unclassified, expressed SNo: 332, Mutant_ID: FN-341, Generation: M2, Mutations: 66, Genes: 105, Seed availability: Yes. FN2767-S.SNP.12:25270458 chr12:025270458 0 W/25270458-25270458 FN2767-S SNP G -> A AC=2;AN=198;BQB=0.99808;DP=3705;DP4=1895,1609,17,20;HOB=0.019998;ICB=0.495001;MQ=48;MQ0F=0;MQB=6.3844e-17;MQSB=0.275324;RPB=0.37421;SGB=122.837;VDB=0.795384;EFF=INTERGENIC(MODIFIER||||||||||1) FN3848-S.SNP.12:25283695 chr12:025283695 0 W/25283695-25283695 FN3848-S SNP G -> T AC=1;AN=158;BQB=0.825872;DP=1858;DP4=925,779,11,3;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=7.16756e-06;MQSB=0.350497;RPB=0.656813;SGB=19.0798;VDB=0.521809;EFF=UTR_5_PRIME(MODIFIER||39||161|LOC_Os12g40840|protein_coding|CODING|LOC_Os12g40840.2|2|1),UTR_5_PRIME(MODIFIER||39||161|LOC_Os12g40840|protein_coding|CODING|LOC_Os12g40840.3|1|1) FN_829-2-5.SNP.12:25297188 chr12:025297188 0 W/25297188-25297188 FN_829-2-5 Single Base Substitution C-T HET SNo: 1497, Mutant_ID: FN_829-2-5, Generation: M3, Mutations: 56, Genes: 17, Seed availability: Yes. FN577-S.SNP.12:25298586 chr12:025298586 0 W/25298586-25298586 FN577-S Single Base Substitution A-G INTRON HET SNo: 566, Mutant_ID: FN577-S, Generation: M2, Mutations: 68, Genes: 35, Seed availability: Yes. FN2365.SNP.12:25323708 chr12:025323708 0 W/25323708-25323708 FN2365 SNP T -> G AC=1;AN=192;BQB=0.887866;DP=5308;DP4=2669,2298,18,16;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=1.32576e-18;MQSB=0.560117;RPB=0.976848;SGB=33.9487;VDB=0.638275;EFF=INTERGENIC(MODIFIER||||||||||1) FN579-S.SNP.12:25328360 chr12:025328360 0 W/25328360-25328360 FN579-S Single Base Substitution T-C INTRON HOMO SNo: 567, Mutant_ID: FN579-S, Generation: M2, Mutations: 69, Genes: 26, Seed availability: No. 702-1.SNP.12:25328532 chr12:025328532 0 W/25328532-25328532 702-1 Single Base Substitution C-A NON_SYNONYMOUS_CODING Homo LOC_Os12g40910 expressed protein SNo: 1443, Mutant_ID: 702-1, Generation: M2, Mutations: 29, Genes: 12, Seed availability: Yes. FN-233.SNP.12:25331134 chr12:025331134 0 W/25331134-25331134 FN-233 Single Base Substitution C-A INTRON HET SNo: 232, Mutant_ID: FN-233, Generation: M2, Mutations: 84, Genes: 96, Seed availability: Yes. FN3720-S.SNP.12:25332936 chr12:025332936 0 W/25332936-25332936 FN3720-S SNP C -> A AC=2;AN=190;BQB=0.96475;DP=2859;DP4=1500,1257,9,14;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=5.86063e-12;MQSB=0.965052;RPB=0.999993;SGB=99.1879;VDB=0.381568;EFF=INTRON(MODIFIER||||301|LOC_Os12g40920|protein_coding|CODING|LOC_Os12g40920.1|1|1),INTRON(MODIFIER||||176|LOC_Os12g40920|protein_coding|CODING|LOC_Os12g40920.3|1|1),INTRON(MODIFIER||||164|LOC_Os12g40920|protein_coding|CODING|LOC_Os12g40920.4|1|1) FN-83.SNP.12:25337180 chr12:025337180 0 W/25337180-25337180 FN-83 Single Base Substitution A-C INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. FN239-S.SNP.12:25342565 chr12:025342565 0 W/25342565-25342565 FN239-S Single Base Substitution G-A INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN1163-S.SNP.12:25342887 chr12:025342887 0 W/25342887-25342887 FN1163-S Single Base Substitution G-A INTERGENIC HET SNo: 1014, Mutant_ID: FN1163-S, Generation: M2, Mutations: 58, Genes: 170, Seed availability: Yes. FN-99.SNP.12:25348556 chr12:025348556 0 W/25348556-25348556 FN-99 Single Base Substitution C-T INTERGENIC HET SNo: 99, Mutant_ID: FN-99, Generation: M2, Mutations: 42, Genes: 11, Seed availability: Yes. FN2408.SNP.12:25349681 chr12:025349681 0 W/25349681-25349681 FN2408 SNP C -> T AC=1;AN=200;BQB=0.0373198;DP=4256;DP4=1870,2117,12,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.99248e-11;MQSB=0.613657;RPB=0.688941;SGB=86.5007;VDB=0.543357;EFF=INTERGENIC(MODIFIER||||||||||1) FN2408.SNP.12:25349682 chr12:025349682 0 W/25349682-25349682 FN2408 SNP G -> T AC=1;AN=200;BQB=0.140165;DP=4267;DP4=1850,2101,12,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.37132e-11;MQSB=0.691966;RPB=0.994094;SGB=81.8956;VDB=0.615287;EFF=INTERGENIC(MODIFIER||||||||||1) FN1162-S.SNP.12:25350034 chr12:025350034 0 W/25350034-25350034 FN1162-S Single Base Substitution T-A INTERGENIC HET SNo: 1013, Mutant_ID: FN1162-S, Generation: M2, Mutations: 69, Genes: 63, Seed availability: Yes. FN3804-S.SNP.12:25354639 chr12:025354639 0 W/25354639-25354639 FN3804-S SNP C -> T AC=1;AN=190;BQB=0.89956;DP=2767;DP4=1489,1181,7,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.84696e-08;MQSB=0.988289;RPB=0.499391;SGB=36.1006;VDB=0.178077;EFF=INTERGENIC(MODIFIER||||||||||1) FN-325.SNP.12:25363254 chr12:025363254 0 W/25363254-25363254 FN-325 Single Base Substitution G-C INTERGENIC HET SNo: 319, Mutant_ID: FN-325, Generation: M2, Mutations: 36, Genes: 5, Seed availability: Yes. FN1613-S.SNP.12:25363254 chr12:025363254 0 W/25363254-25363254 FN1613-S Single Base Substitution G-C INTERGENIC Homo SNo: 1327, Mutant_ID: FN1613-S, Generation: M2, Mutations: 67, Genes: 22, Seed availability: Yes. FN424-S.SNP.12:25363254 chr12:025363254 0 W/25363254-25363254 FN424-S Single Base Substitution G-C INTERGENIC HOMO SNo: 423, Mutant_ID: FN424-S, Generation: M2, Mutations: 98, Genes: 108, Seed availability: Yes. FN569-S.SNP.12:25363254 chr12:025363254 0 W/25363254-25363254 FN569-S Single Base Substitution G-C INTERGENIC HOMO SNo: 560, Mutant_ID: FN569-S, Generation: M2, Mutations: 47, Genes: 22, Seed availability: Yes. FN1268-S.SNP.12:25374161 chr12:025374161 0 W/25374161-25374161 FN1268-S Single Base Substitution G-T STOP_GAINED HET LOC_Os12g41000 retrotransposon protein, putative, unclassified, expressed SNo: 1082, Mutant_ID: FN1268-S, Generation: M2, Mutations: 79, Genes: 7, Seed availability: Yes. FN3849-S.SNP.12:25374327 chr12:025374327 0 W/25374327-25374327 FN3849-S SNP C -> T AC=1;AN=158;BQB=0.782594;DP=2525;DP4=1299,1150,10,7;HOB=8.01154e-05;ICB=0.000161245;MQ=25;MQ0F=0.159208;MQB=0.842974;MQSB=0;RPB=0.453046;SGB=68.9144;VDB=0.366146;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCg/gTg|A966V|1831|LOC_Os12g41000|protein_coding|CODING|LOC_Os12g41000.1|5|1) FN3515-S.SNP.12:25374396 chr12:025374396 0 W/25374396-25374396 FN3515-S SNP G -> C AC=1;AN=188;BQB=0.993137;DP=4195;DP4=2026,2108,14,11;HOB=5.65867e-05;ICB=0.000113775;MQ=22;MQ0F=0.235995;MQB=0.413759;MQSB=0;RPB=0.888358;SGB=78.5038;VDB=0.204789;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gCc|G989A|1831|LOC_Os12g41000|protein_coding|CODING|LOC_Os12g41000.1|5|1) FN1737-S.SNP.12:25376031 chr12:025376031 0 W/25376031-25376031 FN1737-S SNP G -> A AC=1;AN=188;BQB=0.96332;DP=1706;DP4=866,803,10,8;HOB=5.65867e-05;ICB=0.000113775;MQ=17;MQ0F=0.202814;MQB=0.142504;MQSB=0;RPB=0.331455;SGB=31.1628;VDB=0.127523;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aGa/aAa|R1523K|1831|LOC_Os12g41000|protein_coding|CODING|LOC_Os12g41000.1|6|1) FN3802-S.SNP.12:25381311 chr12:025381311 0 W/25381311-25381311 FN3802-S SNP C -> T AC=1;AN=190;BQB=0.546533;DP=2478;DP4=1263,1132,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0.000403551;MQB=0.011102;MQSB=0.000451472;RPB=0.112179;SGB=39.6545;VDB=0.12752;EFF=INTERGENIC(MODIFIER||||||||||1) FN1586-S.SNP.12:25385639 chr12:025385639 0 W/25385639-25385639 FN1586-S Single Base Substitution A-T INTERGENIC HET SNo: 1320, Mutant_ID: FN1586-S, Generation: M2, Mutations: 67, Genes: 40, Seed availability: Yes. FN2194-S.SNP.12:25389271 chr12:025389271 0 W/25389271-25389271 FN2194-S SNP G -> T AC=1;AN=190;BQB=0.819672;DP=4655;DP4=2253,2080,4,14;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.87123e-09;MQSB=0.829013;RPB=0.686551;SGB=31.3213;VDB=0.992962;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.12:25393253 chr12:025393253 0 W/25393253-25393253 FN1549-S Single Base Substitution C-T INTRON Homo SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN-125.SNP.12:25408346 chr12:025408346 0 W/25408346-25408346 FN-125 Single Base Substitution G-A INTRON HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN1682-S.SNP.12:25414268 chr12:025414268 0 W/25414268-25414268 FN1682-S SNP A -> T AC=1;AN=188;BQB=0.928795;DP=3632;DP4=1871,1721,16,11;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=1.2274e-12;MQSB=0.995907;RPB=0.974312;SGB=22.5144;VDB=0.544171;EFF=INTERGENIC(MODIFIER||||||||||1) FN2290.SNP.12:25416669 chr12:025416669 0 W/25416669-25416669 FN2290 SNP A -> G AC=2;AN=192;BQB=0.43281;DP=5269;DP4=2235,2715,41,34;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=5.00404e-42;MQSB=0.92423;RPB=0.244689;SGB=98.087;VDB=0.0713546;EFF=INTRON(MODIFIER||||323|LOC_Os12g41060|protein_coding|CODING|LOC_Os12g41060.1|1|1) FN-408.SNP.12:25417515 chr12:025417515 0 W/25417515-25417515 FN-408 Single Base Substitution G-C INTRON HOMO SNo: 402, Mutant_ID: FN-408, Generation: M2, Mutations: 101, Genes: 18, Seed availability: Yes. FN408-S.SNP.12:25417515 chr12:025417515 0 W/25417515-25417515 FN408-S Single Base Substitution G-C INTRON HOMO SNo: 403, Mutant_ID: FN408-S, Generation: M2, Mutations: 46, Genes: 13, Seed availability: Yes. FN460-S.SNP.12:25417522 chr12:025417522 0 W/25417522-25417522 FN460-S Single Base Substitution A-G INTRON HET SNo: 459, Mutant_ID: FN460-S, Generation: M2, Mutations: 69, Genes: 17, Seed availability: Yes. FN2124-S.SNP.12:25418010 chr12:025418010 0 W/25418010-25418010 FN2124-S SNP A -> G AC=1;AN=168;BQB=0.540003;DP=2937;DP4=982,1910,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.69623e-08;MQSB=0.95274;RPB=0.993851;SGB=4.1907;VDB=0.26298;EFF=INTRON(MODIFIER||||323|LOC_Os12g41060|protein_coding|CODING|LOC_Os12g41060.1|1|1) FN1448-S.SNP.12:25421512 chr12:025421512 0 W/25421512-25421512 FN1448-S Single Base Substitution T-C INTERGENIC HET SNo: 1218, Mutant_ID: FN1448-S, Generation: M2, Mutations: 72, Genes: 14, Seed availability: Yes. FN3496-S.SNP.12:25424253 chr12:025424253 0 W/25424253-25424253 FN3496-S SNP A -> G AC=2;AN=188;BQB=0.989439;DP=2823;DP4=1209,1486,22,8;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.32889e-18;MQSB=0.888001;RPB=0.942188;SGB=96.2203;VDB=0.112958;EFF=INTERGENIC(MODIFIER||||||||||1) FN3393-S.SNP.12:25428226 chr12:025428226 0 W/25428226-25428226 FN3393-S SNP C -> T AC=1;AN=184;BQB=0.965829;DP=2854;DP4=1420,1337,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=0.00154476;MQSB=0.110094;RPB=0.982344;SGB=25.1826;VDB=0.935066;EFF=INTERGENIC(MODIFIER||||||||||1) FN4121-S.SNP.12:25436571 chr12:025436571 0 W/25436571-25436571 FN4121-S SNP C -> T AC=1;AN=182;BQB=0.986676;DP=2922;DP4=1439,1431,3,8;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.00889802;MQB=0.802519;MQSB=0.0137045;RPB=0.989162;SGB=44.1115;VDB=0.98397;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCt/cTt|P813L|1448|LOC_Os12g41080|protein_coding|CODING|LOC_Os12g41080.1|1|1) FN3785-S.SNP.12:25436603 chr12:025436603 0 W/25436603-25436603 FN3785-S SNP A -> C AC=2;AN=190;BQB=0.687238;DP=2948;DP4=1385,1345,12,9;HOB=0.020831;ICB=0.494793;MQ=33;MQ0F=0.0817503;MQB=0.95095;MQSB=2.95396e-11;RPB=0.925733;SGB=90.0802;VDB=0.635658;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Act/Cct|T824P|1448|LOC_Os12g41080|protein_coding|CODING|LOC_Os12g41080.1|1|1) FN1392-S.SNP.12:25437876 chr12:025437876 0 W/25437876-25437876 FN1392-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g41080 retrotransposon protein, putative, Ty1-copia subclass, expressed SNo: 1174, Mutant_ID: FN1392-S, Generation: M2, Mutations: 74, Genes: 24, Seed availability: No. FN3923-S.SNP.12:25443790 chr12:025443790 0 W/25443790-25443790 FN3923-S SNP T -> C AC=1;AN=158;BQB=0.791894;DP=2480;DP4=1283,1121,8,11;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=6.1434e-11;MQSB=0.996294;RPB=0.740885;SGB=30.927;VDB=0.268958;EFF=INTERGENIC(MODIFIER||||||||||1) FN-201.SNP.12:25447949 chr12:025447949 0 W/25447949-25447949 FN-201 Single Base Substitution A-G INTERGENIC HET SNo: 201, Mutant_ID: FN-201, Generation: M2, Mutations: 45, Genes: 245, Seed availability: Yes. FN1540-S.SNP.12:25454977 chr12:025454977 0 W/25454977-25454977 FN1540-S Single Base Substitution G-C INTERGENIC HET SNo: 1289, Mutant_ID: FN1540-S, Generation: M2, Mutations: 117, Genes: 38, Seed availability: Yes. FN3364-S.SNP.12:25455213 chr12:025455213 0 W/25455213-25455213 FN3364-S SNP G -> A AC=2;AN=184;BQB=0.690289;DP=2982;DP4=1520,1334,13,9;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.84518e-11;MQSB=0.941886;RPB=0.525537;SGB=14.4113;VDB=0.68596;EFF=INTERGENIC(MODIFIER||||||||||1) FN1221-S.SNP.12:25466248 chr12:025466248 0 W/25466248-25466248 FN1221-S Single Base Substitution C-T INTERGENIC HET SNo: 1049, Mutant_ID: FN1221-S, Generation: M2, Mutations: 74, Genes: 74, Seed availability: Yes. FN2555-S.SNP.12:25468427 chr12:025468427 0 W/25468427-25468427 FN2555-S SNP C -> G AC=1;AN=198;BQB=0.950873;DP=4386;DP4=2231,1950,10,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=9.60424e-06;MQSB=0.702774;RPB=0.615659;SGB=40.149;VDB=0.963239;EFF=INTERGENIC(MODIFIER||||||||||1) FN1615-S.SNP.12:25472081 chr12:025472081 0 W/25472081-25472081 FN1615-S Single Base Substitution A-T INTERGENIC Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN1697-S.SNP.12:25473382 chr12:025473382 0 W/25473382-25473382 FN1697-S SNP T -> A AC=1;AN=188;BQB=0.197564;DP=4136;DP4=1887,2198,15,21;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=8.1661e-14;MQSB=0.999969;RPB=0.990702;SGB=-44.6718;VDB=0.626247;EFF=INTERGENIC(MODIFIER||||||||||1) FN799-S.SNP.12:25473496 chr12:025473496 0 W/25473496-25473496 FN799-S Single Base Substitution C-T INTERGENIC HOMO SNo: 719, Mutant_ID: FN799-S, Generation: M2, Mutations: 47, Genes: 20, Seed availability: Yes. FN1670-S.SNP.12:25498097 chr12:025498097 0 W/25498097-25498097 FN1670-S SNP G -> T AC=1;AN=188;BQB=0.0320628;DP=4002;DP4=1917,2046,12,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.17244e-09;MQSB=0.998064;RPB=0.725356;SGB=-214.621;VDB=0.283118;EFF=INTERGENIC(MODIFIER||||||||||1) FN487-S.SNP.12:25501116 chr12:025501116 0 W/25501116-25501116 FN487-S Single Base Substitution G-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN487-S.SNP.12:25501117 chr12:025501117 0 W/25501117-25501117 FN487-S Single Base Substitution G-A INTERGENIC HET SNo: 485, Mutant_ID: FN487-S, Generation: M2, Mutations: 71, Genes: 78, Seed availability: Yes. FN554-S.SNP.12:25512402 chr12:025512402 0 W/25512402-25512402 FN554-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g41170 SEY1, putative, expressed SNo: 549, Mutant_ID: FN554-S, Generation: M2, Mutations: 53, Genes: 16, Seed availability: No. FN1060-S.SNP.12:25515799 chr12:025515799 0 W/25515799-25515799 FN1060-S Single Base Substitution T-C INTRON HET SNo: 949, Mutant_ID: FN1060-S, Generation: M2, Mutations: 64, Genes: 71, Seed availability: Yes. FN764-S.SNP.12:25538981 chr12:025538981 0 W/25538981-25538981 FN764-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 686, Mutant_ID: FN764-S, Generation: M2, Mutations: 71, Genes: 40, Seed availability: Yes. FN1514-S.SNP.12:25546543 chr12:025546543 0 W/25546543-25546543 FN1514-S Single Base Substitution C-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN1385-S.SNP.12:25552330 chr12:025552330 0 W/25552330-25552330 FN1385-S Single Base Substitution T-A INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN3110-S.SNP.12:25552330 chr12:025552330 0 W/25552330-25552330 FN3110-S SNP T -> A AC=2;AN=184;BQB=0.746892;DP=2686;DP4=1215,1346,24,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.10014e-22;MQSB=0.781403;RPB=0.664947;SGB=120.271;VDB=0.268885;EFF=INTERGENIC(MODIFIER||||||||||1) FN565-S.SNP.12:25552330 chr12:025552330 0 W/25552330-25552330 FN565-S Single Base Substitution T-A INTERGENIC HOMO SNo: 557, Mutant_ID: FN565-S, Generation: M2, Mutations: 66, Genes: 197, Seed availability: Yes. FN-83.SNP.12:25553369 chr12:025553369 0 W/25553369-25553369 FN-83 Single Base Substitution G-A INTERGENIC HET SNo: 83, Mutant_ID: FN-83, Generation: M2, Mutations: 48, Genes: 36, Seed availability: Yes. W313-1-1-1-1.SNP.12:25557744 chr12:025557744 0 W/25557744-25557744 W313-1-1-1-1 Single Base Substitution T-A INTERGENIC HET SNo: 1405, Mutant_ID: W313-1-1-1-1, Generation: M2, Mutations: 50, Genes: 8, Seed availability: Yes. FN-142.SNP.12:25558978 chr12:025558978 0 W/25558978-25558978 FN-142 Single Base Substitution G-A UTR_3_PRIME HET SNo: 142, Mutant_ID: FN-142, Generation: M2, Mutations: 60, Genes: 22, Seed availability: Yes. FN892-S.SNP.12:25561316 chr12:025561316 0 W/25561316-25561316 FN892-S Single Base Substitution C-A INTERGENIC HOMO SNo: 798, Mutant_ID: FN892-S, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN3694-S.SNP.12:25565446 chr12:025565446 0 W/25565446-25565446 FN3694-S SNP G -> A AC=1;AN=190;BQB=0.956044;DP=3007;DP4=1473,1426,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.39784e-07;MQSB=0.999468;RPB=0.931744;SGB=25.439;VDB=0.237602;EFF=INTRON(MODIFIER||||760|LOC_Os12g41230|protein_coding|CODING|LOC_Os12g41230.1|5|1),INTRON(MODIFIER||||760|LOC_Os12g41230|protein_coding|CODING|LOC_Os12g41230.2|5|1),INTRON(MODIFIER||||760|LOC_Os12g41230|protein_coding|CODING|LOC_Os12g41230.3|5|1) FN2465.SNP.12:25573633 chr12:025573633 0 W/25573633-25573633 FN2465 SNP G -> A AC=1;AN=200;BQB=0.840694;DP=4123;DP4=2261,1606,16,11;HOB=5e-05;ICB=0.0001005;MQ=42;MQ0F=0.005821;MQB=0.462051;MQSB=0.0177295;RPB=0.969477;SGB=55.5366;VDB=0.679627;EFF=INTRON(MODIFIER||||224|LOC_Os12g41240|protein_coding|CODING|LOC_Os12g41240.1|1|1) FN3970-S.SNP.12:25577831 chr12:025577831 0 W/25577831-25577831 FN3970-S SNP G -> T AC=1;AN=168;BQB=0.856916;DP=2568;DP4=1046,1382,6,12;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.97766e-08;MQSB=0.999911;RPB=0.839893;SGB=29.4772;VDB=0.780269;EFF=INTRON(MODIFIER||||737|LOC_Os12g41250|protein_coding|CODING|LOC_Os12g41250.1|3|1) FN2678-S.SNP.12:25591567 chr12:025591567 0 W/25591567-25591567 FN2678-S SNP C -> T AC=1;AN=200;BQB=0.957157;DP=5036;DP4=2625,2125,11,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.50521e-11;MQSB=0.897148;RPB=0.875888;SGB=34.6953;VDB=0.341944;EFF=INTERGENIC(MODIFIER||||||||||1) FN3947-S.SNP.12:25595387 chr12:025595387 0 W/25595387-25595387 FN3947-S SNP G -> A AC=1;AN=168;BQB=0.982675;DP=2449;DP4=1121,1214,9,13;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.32949e-12;MQSB=0.994459;RPB=0.264784;SGB=65.6253;VDB=0.00853643;EFF=SYNONYMOUS_CODING(LOW|SILENT|cgG/cgA|R382|938|LOC_Os12g41270|protein_coding|CODING|LOC_Os12g41270.1|3|1) FN3292-S.SNP.12:25597319 chr12:025597319 0 W/25597319-25597319 FN3292-S SNP G -> A AC=2;AN=184;BQB=0.123423;DP=3217;DP4=1351,1699,18,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.44378e-12;MQSB=0.959331;RPB=0.0717513;SGB=123.793;VDB=0.259206;EFF=INTRON(MODIFIER||||938|LOC_Os12g41270|protein_coding|CODING|LOC_Os12g41270.1|3|1) FN1516-S.SNP.12:25599175 chr12:025599175 0 W/25599175-25599175 FN1516-S Single Base Substitution G-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN1516-S.SNP.12:25599176 chr12:025599176 0 W/25599176-25599176 FN1516-S Single Base Substitution A-T INTERGENIC HET SNo: 1269, Mutant_ID: FN1516-S, Generation: M2, Mutations: 84, Genes: 29, Seed availability: Yes. FN4043-S.SNP.12:25603846 chr12:025603846 0 W/25603846-25603846 FN4043-S SNP T -> A AC=1;AN=168;BQB=0.910246;DP=2649;DP4=967,1546,3,10;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.0237826;MQB=6.23063e-06;MQSB=0.403981;RPB=0.474545;SGB=34.748;VDB=0.803441;EFF=INTERGENIC(MODIFIER||||||||||1) FN1703-S.SNP.12:25604127 chr12:025604127 0 W/25604127-25604127 FN1703-S SNP G -> A AC=2;AN=188;BQB=0.663419;DP=1993;DP4=1142,790,12,9;HOB=0.0210502;ICB=0.494738;MQ=38;MQ0F=0.120421;MQB=0.96163;MQSB=0;RPB=0.810431;SGB=64.3306;VDB=0.370546;EFF=INTERGENIC(MODIFIER||||||||||1) FN1153-S.SNP.12:25613912 chr12:025613912 0 W/25613912-25613912 FN1153-S Single Base Substitution G-A SYNONYMOUS_CODING HOMO SNo: 1009, Mutant_ID: FN1153-S, Generation: M2, Mutations: 56, Genes: 73, Seed availability: Yes. FN3916-S.SNP.12:25618887 chr12:025618887 0 W/25618887-25618887 FN3916-S SNP C -> A AC=1;AN=158;BQB=0.979721;DP=2795;DP4=1583,1102,11,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0.00107335;MQB=1.70633e-07;MQSB=0.980601;RPB=0.666895;SGB=28.5576;VDB=0.841004;EFF=INTERGENIC(MODIFIER||||||||||1) FN2276-S.SNP.12:25619015 chr12:025619015 0 W/25619015-25619015 FN2276-S SNP C -> G AC=1;AN=190;BQB=0.299825;DP=4801;DP4=2238,2242,14,16;HOB=5.54017e-05;ICB=0.000111386;MQ=47;MQ0F=0;MQB=2.1823e-09;MQSB=0.0019015;RPB=0.963531;SGB=96.5165;VDB=0.446699;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.12:25620974 chr12:025620974 0 W/25620974-25620974 FN938-S Single Base Substitution G-T INTRON HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1335-S.SNP.12:25629205 chr12:025629205 0 W/25629205-25629205 FN1335-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g41360 expressed protein SNo: 1136, Mutant_ID: FN1335-S, Generation: M2, Mutations: 60, Genes: 39, Seed availability: Yes. FN3730-S.SNP.12:25648495 chr12:025648495 0 W/25648495-25648495 FN3730-S SNP G -> A AC=2;AN=190;BQB=0.97675;DP=2760;DP4=1353,1273,22,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.05361e-26;MQSB=0.999821;RPB=0.956976;SGB=162.804;VDB=0.168626;EFF=INTRON(MODIFIER||||464|LOC_Os12g41400|protein_coding|CODING|LOC_Os12g41400.1|1|1) FN1439-S.SNP.12:25651505 chr12:025651505 0 W/25651505-25651505 FN1439-S Single Base Substitution C-A SPLICE_SITE_REGION HET SNo: 1210, Mutant_ID: FN1439-S, Generation: M2, Mutations: 57, Genes: 10, Seed availability: No. FN3404-S.SNP.12:25660636 chr12:025660636 0 W/25660636-25660636 FN3404-S SNP T -> A AC=1;AN=184;BQB=0.978036;DP=2604;DP4=1287,1231,5,5;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0;MQB=0.000374746;MQSB=0.991957;RPB=0.883035;SGB=10.6662;VDB=0.818265;EFF=INTERGENIC(MODIFIER||||||||||1) FN806-S.SNP.12:25660668 chr12:025660668 0 W/25660668-25660668 FN806-S Single Base Substitution G-A INTERGENIC HOMO SNo: 724, Mutant_ID: FN806-S, Generation: M2, Mutations: 73, Genes: 21, Seed availability: Yes. FN-334.SNP.12:25661792 chr12:025661792 0 W/25661792-25661792 FN-334 Single Base Substitution G-A INTERGENIC HOMO SNo: 326, Mutant_ID: FN-334, Generation: M2, Mutations: 47, Genes: 63, Seed availability: Yes. FN-269.SNP.12:25663439 chr12:025663439 0 W/25663439-25663439 FN-269 Single Base Substitution G-A INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-269.SNP.12:25663440 chr12:025663440 0 W/25663440-25663440 FN-269 Single Base Substitution A-G INTERGENIC HET SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN3864-S.SNP.12:25666364 chr12:025666364 0 W/25666364-25666364 FN3864-S SNP C -> T AC=1;AN=158;BQB=0.805073;DP=2279;DP4=1004,1168,5,10;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.12535e-09;MQSB=0.586843;RPB=0.967503;SGB=60.1755;VDB=0.913309;EFF=UTR_5_PRIME(MODIFIER||386||153|LOC_Os12g41430|protein_coding|CODING|LOC_Os12g41430.1|1|1),UTR_5_PRIME(MODIFIER||386||153|LOC_Os12g41430|protein_coding|CODING|LOC_Os12g41430.2|1|1),UTR_5_PRIME(MODIFIER||386||130|LOC_Os12g41430|protein_coding|CODING|LOC_Os12g41430.3|1|1) FN2202-S.SNP.12:25667408 chr12:025667408 0 W/25667408-25667408 FN2202-S SNP G -> T AC=1;AN=190;BQB=0.97071;DP=5403;DP4=2690,2405,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.32583e-12;MQSB=0.962346;RPB=0.989899;SGB=-12.1142;VDB=0.878147;EFF=INTERGENIC(MODIFIER||||||||||1) FN1506-S.SNP.12:25676880 chr12:025676880 0 W/25676880-25676880 FN1506-S Single Base Substitution G-A INTERGENIC HET SNo: 1262, Mutant_ID: FN1506-S, Generation: M2, Mutations: 96, Genes: 38, Seed availability: No. FN3431-S.SNP.12:25688304 chr12:025688304 0 W/25688304-25688304 FN3431-S SNP C -> T AC=1;AN=184;BQB=0.993674;DP=3670;DP4=1991,1473,7,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.01407e-06;MQSB=0.674503;RPB=0.108331;SGB=15.7097;VDB=0.277085;EFF=INTRON(MODIFIER||||468|LOC_Os12g41460|protein_coding|CODING|LOC_Os12g41460.1|3|1) FN2680-S.SNP.12:25696197 chr12:025696197 0 W/25696197-25696197 FN2680-S SNP C -> A AC=1;AN=200;BQB=0.829081;DP=4559;DP4=2350,1975,10,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.94346e-16;MQSB=0.682099;RPB=0.875439;SGB=114.132;VDB=0.656997;EFF=INTERGENIC(MODIFIER||||||||||1) FN2645-S.SNP.12:25697363 chr12:025697363 0 W/25697363-25697363 FN2645-S SNP C -> T AC=1;AN=200;BQB=0.96904;DP=4900;DP4=2910,1775,13,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.38973e-11;MQSB=0.101934;RPB=0.970719;SGB=91.1059;VDB=0.769231;EFF=INTERGENIC(MODIFIER||||||||||1) FN4235-S.SNP.12:25704753 chr12:025704753 0 W/25704753-25704753 FN4235-S SNP C -> A AC=2;AN=170;BQB=0.998451;DP=2481;DP4=1168,1230,9,8;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=1.15006e-09;MQSB=0.971156;RPB=0.681893;SGB=70.0854;VDB=0.30411;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcG/tcT|S186|408|LOC_Os12g41500|protein_coding|CODING|LOC_Os12g41500.1|5|1) FN3591-S.SNP.12:25711271 chr12:025711271 0 W/25711271-25711271 FN3591-S SNP G -> T AC=2;AN=188;BQB=0.83781;DP=4171;DP4=2151,1878,27,36;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.97999e-32;MQSB=0.997791;RPB=0.0251483;SGB=280.687;VDB=0.162849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cac/Aac|H443N|656|LOC_Os12g41510|protein_coding|CODING|LOC_Os12g41510.1|2|1) FN3341-S.SNP.12:25716842 chr12:025716842 0 W/25716842-25716842 FN3341-S SNP C -> T AC=2;AN=184;BQB=0.992441;DP=1406;DP4=614,616,3,12;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.000711238;MQB=3.80861e-05;MQSB=3.12106e-09;RPB=0.0270296;SGB=23.2751;VDB=0.733485;EFF=INTERGENIC(MODIFIER||||||||||1) FN_777-2-1.SNP.12:25717172 chr12:025717172 0 W/25717172-25717172 FN_777-2-1 Single Base Substitution A-C Homo SNo: 1482, Mutant_ID: FN_777-2-1, Generation: M3, Mutations: 71, Genes: 30, Seed availability: No. FN3523-S.SNP.12:25719047 chr12:025719047 0 W/25719047-25719047 FN3523-S SNP G -> A AC=1;AN=188;BQB=0.940795;DP=3946;DP4=2297,1561,6,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=2.58065e-07;MQSB=0.996795;RPB=0.791485;SGB=44.4357;VDB=0.232475;EFF=SYNONYMOUS_CODING(LOW|SILENT|atC/atT|I542|682|LOC_Os12g41530|protein_coding|CODING|LOC_Os12g41530.1|1|1) FN725-S.SNP.12:25724354 chr12:025724354 0 W/25724354-25724354 FN725-S Single Base Substitution A-G INTRON HET SNo: 650, Mutant_ID: FN725-S, Generation: M2, Mutations: 81, Genes: 56, Seed availability: Yes. FN-290.SNP.12:25736482 chr12:025736482 0 W/25736482-25736482 FN-290 Single Base Substitution G-C INTERGENIC HET SNo: 286, Mutant_ID: FN-290, Generation: M2, Mutations: 68, Genes: 91, Seed availability: Yes. FN4119-S.SNP.12:25738658 chr12:025738658 0 W/25738658-25738658 FN4119-S SNP T -> C AC=2;AN=182;BQB=0.970132;DP=2880;DP4=1534,1248,6,8;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=2.46198e-09;MQSB=0.935639;RPB=0.997103;SGB=39.1386;VDB=0.952373;EFF=SPLICE_SITE_REGION(LOW||||279|LOC_Os12g41590|protein_coding|CODING|LOC_Os12g41590.1|5|1),INTRON(MODIFIER||||279|LOC_Os12g41590|protein_coding|CODING|LOC_Os12g41590.1|5|1) FN951-S.SNP.12:25739626 chr12:025739626 0 W/25739626-25739626 FN951-S Single Base Substitution C-T INTRON HET SNo: 857, Mutant_ID: FN951-S, Generation: M2, Mutations: 68, Genes: 39, Seed availability: No. FN3524-S.SNP.12:25745264 chr12:025745264 0 W/25745264-25745264 FN3524-S SNP T -> A AC=1;AN=188;BQB=0.998366;DP=2660;DP4=1195,1395,3,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=6.67192e-08;MQSB=0.834145;RPB=0.922774;SGB=32.441;VDB=0.647518;EFF=UTR_5_PRIME(MODIFIER||401||173|LOC_Os12g41600|protein_coding|CODING|LOC_Os12g41600.1|1|1),UTR_5_PRIME(MODIFIER||409||170|LOC_Os12g41600|protein_coding|CODING|LOC_Os12g41600.2|1|1|WARNING_TRANSCRIPT_INCOMPLETE) FN4344-S.SNP.12:25750378 chr12:025750378 0 W/25750378-25750378 FN4344-S SNP G -> A AC=1;AN=170;BQB=0.995758;DP=2446;DP4=1206,1168,9,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=3.0036e-07;MQSB=0.976893;RPB=0.826583;SGB=34.878;VDB=0.382138;EFF=INTERGENIC(MODIFIER||||||||||1) FN3783-S.SNP.12:25750594 chr12:025750594 0 W/25750594-25750594 FN3783-S SNP C -> T AC=1;AN=190;BQB=0.985867;DP=2642;DP4=1056,1462,5,10;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.99832e-08;MQSB=0.997994;RPB=0.932603;SGB=62.7569;VDB=0.729547;EFF=INTERGENIC(MODIFIER||||||||||1) FN2185-S.SNP.12:25753920 chr12:025753920 0 W/25753920-25753920 FN2185-S SNP T -> A AC=1;AN=190;BQB=0.693946;DP=4434;DP4=2369,1841,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=2.13451e-07;MQSB=0.999968;RPB=0.198227;SGB=44.5415;VDB=0.144698;EFF=INTRON(MODIFIER||||797|LOC_Os12g41620|protein_coding|CODING|LOC_Os12g41620.1|5|1) FN891-S.SNP.12:25761039 chr12:025761039 0 W/25761039-25761039 FN891-S Single Base Substitution G-A INTERGENIC HET SNo: 797, Mutant_ID: FN891-S, Generation: M2, Mutations: 75, Genes: 25, Seed availability: No. FN584-S.SNP.12:25761167 chr12:025761167 0 W/25761167-25761167 FN584-S Single Base Substitution T-C INTERGENIC HET SNo: 570, Mutant_ID: FN584-S, Generation: M2, Mutations: 66, Genes: 17, Seed availability: No. FN768-S.SNP.12:25761358 chr12:025761358 0 W/25761358-25761358 FN768-S Single Base Substitution T-A INTERGENIC HET SNo: 689, Mutant_ID: FN768-S, Generation: M2, Mutations: 69, Genes: 16, Seed availability: Yes. FN2095-S.SNP.12:25763003 chr12:025763003 0 W/25763003-25763003 FN2095-S SNP C -> T AC=1;AN=168;BQB=0.49843;DP=2436;DP4=971,1401,10,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.76124e-07;MQSB=0.803028;RPB=0.271936;SGB=8.48315;VDB=0.91969;EFF=INTERGENIC(MODIFIER||||||||||1) FN-133.SNP.12:25764482 chr12:025764482 0 W/25764482-25764482 FN-133 Single Base Substitution T-A INTERGENIC HET SNo: 133, Mutant_ID: FN-133, Generation: M2, Mutations: 50, Genes: 21, Seed availability: Yes. W481-5-1.SNP.12:25772329 chr12:025772329 0 W/25772329-25772329 W481-5-1 Single Base Substitution G-A INTRON HET SNo: 1422, Mutant_ID: W481-5-1, Generation: M2, Mutations: 66, Genes: 15, Seed availability: Yes. FN661-S.SNP.12:25778826 chr12:025778826 0 W/25778826-25778826 FN661-S Single Base Substitution G-A INTERGENIC HET SNo: 601, Mutant_ID: FN661-S, Generation: M2, Mutations: 80, Genes: 44, Seed availability: Yes. FN979-S.SNP.12:25783737 chr12:025783737 0 W/25783737-25783737 FN979-S Single Base Substitution T-C INTERGENIC HET SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN1024-S.SNP.12:25801249 chr12:025801249 0 W/25801249-25801249 FN1024-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 920, Mutant_ID: FN1024-S, Generation: M2, Mutations: 93, Genes: 242, Seed availability: Yes. FN3362-S.SNP.12:25802620 chr12:025802620 0 W/25802620-25802620 FN3362-S SNP T -> A AC=1;AN=184;BQB=0.583933;DP=2693;DP4=1234,1370,12,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.83444e-07;MQSB=0.998278;RPB=0.274705;SGB=-14.714;VDB=0.697292;EFF=INTRON(MODIFIER||||333|LOC_Os12g41680|protein_coding|CODING|LOC_Os12g41680.1|1|1) FN598-S.SNP.12:25802821 chr12:025802821 0 W/25802821-25802821 FN598-S Single Base Substitution G-A INTRON HET SNo: 581, Mutant_ID: FN598-S, Generation: M2, Mutations: 82, Genes: 31, Seed availability: Yes. FN4109-S.SNP.12:25803536 chr12:025803536 0 W/25803536-25803536 FN4109-S SNP T -> C AC=1;AN=180;BQB=0.459072;DP=2716;DP4=1343,1284,7,6;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=2.87258e-07;MQSB=0.999356;RPB=0.0187309;SGB=18.1224;VDB=0.203023;EFF=INTRON(MODIFIER||||333|LOC_Os12g41680|protein_coding|CODING|LOC_Os12g41680.1|1|1) FN691-S.SNP.12:25804505 chr12:025804505 0 W/25804505-25804505 FN691-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g41680 No apical meristem protein, putative, expressed SNo: 622, Mutant_ID: FN691-S, Generation: M2, Mutations: 64, Genes: 26, Seed availability: Yes. FN2172-S.SNP.12:25811358 chr12:025811358 0 W/25811358-25811358 FN2172-S SNP A -> T AC=2;AN=168;BQB=0.492657;DP=3669;DP4=1871,1689,32,20;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=4.13125e-18;MQSB=0.935006;RPB=0.67886;SGB=-339.274;VDB=0.000810299;EFF=INTRON(MODIFIER||||278|LOC_Os12g41690|protein_coding|CODING|LOC_Os12g41690.1|2|1) FN2794-S.SNP.12:25814013 chr12:025814013 0 W/25814013-25814013 FN2794-S SNP T -> G AC=2;AN=198;BQB=0.107582;DP=4072;DP4=1948,1892,26,22;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=2.19244e-24;MQSB=0.850953;RPB=0.937903;SGB=214.973;VDB=0.763969;EFF=INTERGENIC(MODIFIER||||||||||1) FN939-S.SNP.12:25815612 chr12:025815612 0 W/25815612-25815612 FN939-S Single Base Substitution T-A UTR_3_PRIME HET SNo: 845, Mutant_ID: FN939-S, Generation: M2, Mutations: 70, Genes: 20, Seed availability: Yes. FN2474.SNP.12:25828648 chr12:025828648 0 W/25828648-25828648 FN2474 SNP A -> T AC=2;AN=200;BQB=0.322425;DP=4794;DP4=2197,2223,20,27;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.73985e-24;MQSB=0.987529;RPB=0.781792;SGB=210.84;VDB=0.271771;EFF=UTR_3_PRIME(MODIFIER||467||628|LOC_Os12g41715|protein_coding|CODING|LOC_Os12g41715.1|7|1) FN1583-S.SNP.12:25845118 chr12:025845118 0 W/25845118-25845118 FN1583-S Single Base Substitution A-G INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN1583-S.SNP.12:25845120 chr12:025845120 0 W/25845120-25845120 FN1583-S Single Base Substitution C-T INTERGENIC HET SNo: 1318, Mutant_ID: FN1583-S, Generation: M2, Mutations: 64, Genes: 17, Seed availability: Yes. FN3286-S.SNP.12:25852528 chr12:025852528 0 W/25852528-25852528 FN3286-S SNP A -> C AC=1;AN=184;BQB=0.636927;DP=3768;DP4=1997,1609,17,14;HOB=5.90737e-05;ICB=0.00011879;MQ=21;MQ0F=0.271762;MQB=0.0257426;MQSB=3.9331e-12;RPB=0.07192;SGB=134.656;VDB=0.00433741;EFF=INTERGENIC(MODIFIER||||||||||1) FN3345-S.SNP.12:25857006 chr12:025857006 0 W/25857006-25857006 FN3345-S SNP T -> A AC=2;AN=184;BQB=0.999409;DP=2753;DP4=1193,1363,11,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=2.53152e-13;MQSB=0.998497;RPB=0.136909;SGB=48.493;VDB=0.183307;EFF=INTERGENIC(MODIFIER||||||||||1) FN1572-S.SNP.12:25858661 chr12:025858661 0 W/25858661-25858661 FN1572-S Single Base Substitution C-T INTERGENIC HET SNo: 1311, Mutant_ID: FN1572-S, Generation: M2, Mutations: 96, Genes: 23, Seed availability: Yes. FN623-S.SNP.12:25860493 chr12:025860493 0 W/25860493-25860493 FN623-S Single Base Substitution T-A INTERGENIC HET SNo: 588, Mutant_ID: FN623-S, Generation: M2, Mutations: 59, Genes: 262, Seed availability: Yes. FN3939-S.SNP.12:25860885 chr12:025860885 0 W/25860885-25860885 FN3939-S SNP T -> C AC=2;AN=158;BQB=0.789321;DP=1309;DP4=74,1181,0,14;HOB=0.024996;ICB=0.493752;MQ=48;MQ0F=0;MQB=1.74421e-07;MQSB=1.10753e-05;RPB=0.668195;SGB=55.806;VDB=0.0501844;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.12:25862041 chr12:025862041 0 W/25862041-25862041 FN1072-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g41740 retrotransposon protein, putative, unclassified SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN-202.SNP.12:25862261 chr12:025862261 0 W/25862261-25862261 FN-202 Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 202, Mutant_ID: FN-202, Generation: M2, Mutations: 70, Genes: 15, Seed availability: Yes. FN1037-S.SNP.12:25867210 chr12:025867210 0 W/25867210-25867210 FN1037-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 933, Mutant_ID: FN1037-S, Generation: M2, Mutations: 73, Genes: 46, Seed availability: Yes. FN3559-S.SNP.12:25871599 chr12:025871599 0 W/25871599-25871599 FN3559-S SNP G -> T AC=1;AN=188;BQB=0.963694;DP=2738;DP4=1348,1341,4,5;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.75072e-06;MQSB=0.401475;RPB=0.677444;SGB=35.3493;VDB=0.33691;EFF=INTERGENIC(MODIFIER||||||||||1) FN-65.SNP.12:25872222 chr12:025872222 0 W/25872222-25872222 FN-65 Single Base Substitution C-T INTERGENIC HET SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN1615-S.SNP.12:25875631 chr12:025875631 0 W/25875631-25875631 FN1615-S Single Base Substitution T-A INTERGENIC Homo SNo: 1329, Mutant_ID: FN1615-S, Generation: M2, Mutations: 85, Genes: 14, Seed availability: Yes. FN4017-S.SNP.12:25882181 chr12:025882181 0 W/25882181-25882181 FN4017-S SNP G -> A AC=1;AN=168;BQB=0.978059;DP=3020;DP4=1565,1322,7,5;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.54058e-06;MQSB=0.888119;RPB=0.355582;SGB=14.8923;VDB=0.254982;EFF=INTERGENIC(MODIFIER||||||||||1) FN692-S.SNP.12:25900663 chr12:025900663 0 W/25900663-25900663 FN692-S Single Base Substitution A-T INTERGENIC HET SNo: 623, Mutant_ID: FN692-S, Generation: M2, Mutations: 76, Genes: 19, Seed availability: Yes. FN1356-S.SNP.12:25907397 chr12:025907397 0 W/25907397-25907397 FN1356-S Single Base Substitution T-A UTR_5_PRIME HET SNo: 1151, Mutant_ID: FN1356-S, Generation: M2, Mutations: 67, Genes: 121, Seed availability: Yes. FN983-S.SNP.12:25917576 chr12:025917576 0 W/25917576-25917576 FN983-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g41840 protein transport protein Sec61 subunit alpha, putative, expressed SNo: 887, Mutant_ID: FN983-S, Generation: M2, Mutations: 62, Genes: 47, Seed availability: Yes. FN1156-S.SNP.12:25918156 chr12:025918156 0 W/25918156-25918156 FN1156-S Single Base Substitution C-A INTERGENIC HET SNo: 1011, Mutant_ID: FN1156-S, Generation: M2, Mutations: 45, Genes: 19, Seed availability: Yes. FN552-S.SNP.12:25923464 chr12:025923464 0 W/25923464-25923464 FN552-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HET LOC_Os12g41860 START domain containing protein, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN552-S.SNP.12:25923465 chr12:025923465 0 W/25923465-25923465 FN552-S Single Base Substitution G-T NON_SYNONYMOUS_CODING HET LOC_Os12g41860 START domain containing protein, expressed SNo: 547, Mutant_ID: FN552-S, Generation: M2, Mutations: 68, Genes: 119, Seed availability: Yes. FN-189.SNP.12:25929515 chr12:025929515 0 W/25929515-25929515 FN-189 Single Base Substitution C-T INTERGENIC HET SNo: 189, Mutant_ID: FN-189, Generation: M2, Mutations: 100, Genes: 48, Seed availability: Yes. FN3416-S.SNP.12:25930940 chr12:025930940 0 W/25930940-25930940 FN3416-S SNP C -> T AC=1;AN=184;BQB=0.993598;DP=3165;DP4=1573,1456,11,5;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0;MQB=4.40539e-08;MQSB=0.00224379;RPB=0.79243;SGB=46.3132;VDB=0.399873;EFF=INTERGENIC(MODIFIER||||||||||1) FN2242-S.SNP.12:25934369 chr12:025934369 0 W/25934369-25934369 FN2242-S SNP C -> A AC=2;AN=190;BQB=0.141901;DP=5053;DP4=2566,2173,24,16;HOB=0.020831;ICB=0.494793;MQ=44;MQ0F=0;MQB=1.52194e-07;MQSB=0.155126;RPB=0.387367;SGB=-1.59056;VDB=0.529423;EFF=INTERGENIC(MODIFIER||||||||||1) FN1072-S.SNP.12:25937861 chr12:025937861 0 W/25937861-25937861 FN1072-S Single Base Substitution G-A INTERGENIC HET SNo: 959, Mutant_ID: FN1072-S, Generation: M2, Mutations: 73, Genes: 14, Seed availability: Yes. FN-336.SNP.12:25947110 chr12:025947110 0 W/25947110-25947110 FN-336 Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g41870 transposon protein, putative, unclassified, expressed SNo: 328, Mutant_ID: FN-336, Generation: M2, Mutations: 49, Genes: 92, Seed availability: Yes. FN3718-S.SNP.12:25950960 chr12:025950960 0 W/25950960-25950960 FN3718-S SNP T -> C AC=1;AN=190;BQB=0.889938;DP=1508;DP4=750,666,7,7;HOB=5.54017e-05;ICB=0.000111386;MQ=39;MQ0F=0.0557029;MQB=0.351952;MQSB=1.48822e-20;RPB=0.998345;SGB=39.6545;VDB=0.941134;EFF=INTERGENIC(MODIFIER||||||||||1) FN373-S.SNP.12:25960158 chr12:025960158 0 W/25960158-25960158 FN373-S Single Base Substitution G-A INTERGENIC HOMO SNo: 362, Mutant_ID: FN373-S, Generation: M2, Mutations: 57, Genes: 14, Seed availability: Yes. FN2353.SNP.12:25962734 chr12:025962734 0 W/25962734-25962734 FN2353 SNP G -> A AC=2;AN=192;BQB=0.199735;DP=4931;DP4=2402,2225,16,17;HOB=0.0206163;ICB=0.494846;MQ=49;MQ0F=0;MQB=9.97923e-17;MQSB=0.578002;RPB=0.468949;SGB=32.3844;VDB=0.807344;EFF=INTRON(MODIFIER||||601|LOC_Os12g41890|protein_coding|CODING|LOC_Os12g41890.1|1|1) FN930-S.SNP.12:25970238 chr12:025970238 0 W/25970238-25970238 FN930-S Single Base Substitution T-C INTRON HOMO SNo: 836, Mutant_ID: FN930-S, Generation: M2, Mutations: 53, Genes: 21, Seed availability: No. FN1058-S.SNP.12:25974203 chr12:025974203 0 W/25974203-25974203 FN1058-S Single Base Substitution C-T INTRON HET SNo: 948, Mutant_ID: FN1058-S, Generation: M2, Mutations: 71, Genes: 17, Seed availability: Yes. FN411-S.SNP.12:25975135 chr12:025975135 0 W/25975135-25975135 FN411-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g41900 SET domain containing protein, expressed SNo: 409, Mutant_ID: FN411-S, Generation: M2, Mutations: 61, Genes: 8, Seed availability: Yes. FN736-S.SNP.12:25977438 chr12:025977438 0 W/25977438-25977438 FN736-S Single Base Substitution C-A INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2161-S.SNP.12:25989445 chr12:025989445 0 W/25989445-25989445 FN2161-S SNP A -> T AC=1;AN=168;BQB=0.0861418;DP=3350;DP4=1391,1917,11,10;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=3.4802e-06;MQSB=0.965074;RPB=0.956952;SGB=-64.9298;VDB=0.874372;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.12:25991251 chr12:025991251 0 W/25991251-25991251 FN2465 SNP A -> T AC=1;AN=200;BQB=0.506738;DP=4735;DP4=2457,1993,15,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.97032e-14;MQSB=0.328643;RPB=0.768174;SGB=79.9264;VDB=0.198072;EFF=SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S287|448|LOC_Os12g41930|protein_coding|CODING|LOC_Os12g41930.1|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S287|403|LOC_Os12g41930|protein_coding|CODING|LOC_Os12g41930.3|4|1),SYNONYMOUS_CODING(LOW|SILENT|tcA/tcT|S287|403|LOC_Os12g41930|protein_coding|CODING|LOC_Os12g41930.2|4|1) FN229-S.SNP.12:25996986 chr12:025996986 0 W/25996986-25996986 FN229-S Single Base Substitution G-T INTERGENIC HET SNo: 228, Mutant_ID: FN229-S, Generation: M2, Mutations: 79, Genes: 17, Seed availability: Yes. FN936-S.SNP.12:26001934 chr12:026001934 0 W/26001934-26001934 FN936-S Single Base Substitution T-A INTERGENIC HET SNo: 842, Mutant_ID: FN936-S, Generation: M2, Mutations: 56, Genes: 24, Seed availability: Yes. FN2452.SNP.12:26004785 chr12:026004785 0 W/26004785-26004785 FN2452 SNP T -> C AC=1;AN=200;BQB=0.280934;DP=4532;DP4=2227,1906,6,7;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.067e-07;MQSB=0.97287;RPB=0.571807;SGB=-16.1361;VDB=0.795392;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Agt/Ggt|S372G|899|LOC_Os12g41950|protein_coding|CODING|LOC_Os12g41950.1|11|1) FN3464-S.SNP.12:26010003 chr12:026010003 0 W/26010003-26010003 FN3464-S SNP C -> T AC=1;AN=184;BQB=0.974688;DP=2676;DP4=1283,1324,6,5;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.12764e-07;MQSB=0.99108;RPB=0.401666;SGB=44.2207;VDB=0.11127;EFF=INTERGENIC(MODIFIER||||||||||1) FN814-S.SNP.12:26014213 chr12:026014213 0 W/26014213-26014213 FN814-S Single Base Substitution T-G INTERGENIC HOMO SNo: 732, Mutant_ID: FN814-S, Generation: M2, Mutations: 55, Genes: 22, Seed availability: Yes. FN-303.SNP.12:26021904 chr12:026021904 0 W/26021904-26021904 FN-303 Single Base Substitution A-T UTR_5_PRIME HET SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN962-S.SNP.12:26028236 chr12:026028236 0 W/26028236-26028236 FN962-S Single Base Substitution A-C INTERGENIC HET SNo: 866, Mutant_ID: FN962-S, Generation: M2, Mutations: 67, Genes: 19, Seed availability: Yes. FN3400-S.SNP.12:26043800 chr12:026043800 0 W/26043800-26043800 FN3400-S SNP C -> A AC=1;AN=184;BQB=0.983402;DP=2637;DP4=1402,1164,4,4;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000379219;MQB=0.00162067;MQSB=0.815202;RPB=0.774875;SGB=30.6558;VDB=0.664072;EFF=INTERGENIC(MODIFIER||||||||||1) FN1304-S.SNP.12:26044535 chr12:026044535 0 W/26044535-26044535 FN1304-S Single Base Substitution G-A INTRON HET SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN3842-S.SNP.12:26046676 chr12:026046676 0 W/26046676-26046676 FN3842-S SNP A -> C AC=1;AN=190;BQB=0.956291;DP=2665;DP4=1278,1247,10,11;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.27453e-12;MQSB=0.99814;RPB=0.387973;SGB=64.5316;VDB=0.143519;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTc/cGc|L46R|384|LOC_Os12g42010|protein_coding|CODING|LOC_Os12g42010.1|1|1) FN1446-S.SNP.12:26049041 chr12:026049041 0 W/26049041-26049041 FN1446-S Single Base Substitution A-T INTERGENIC HET SNo: 1217, Mutant_ID: FN1446-S, Generation: M2, Mutations: 64, Genes: 59, Seed availability: Yes. FN813-S.SNP.12:26049422 chr12:026049422 0 W/26049422-26049422 FN813-S Single Base Substitution A-T INTERGENIC HET SNo: 731, Mutant_ID: FN813-S, Generation: M2, Mutations: 51, Genes: 16, Seed availability: Yes. FN2140-S.SNP.12:26057012 chr12:026057012 0 W/26057012-26057012 FN2140-S SNP G -> C AC=1;AN=168;BQB=0.740454;DP=3449;DP4=1975,1438,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.0607e-06;MQSB=0.919233;RPB=0.973582;SGB=27.0464;VDB=0.408374;EFF=INTERGENIC(MODIFIER||||||||||1) FN2224-S.SNP.12:26062782 chr12:026062782 0 W/26062782-26062782 FN2224-S SNP G -> A AC=1;AN=190;BQB=0.425825;DP=5421;DP4=2481,2485,6,11;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0313595;MQB=0.0382221;MQSB=9.1265e-28;RPB=0.397352;SGB=71.8647;VDB=0.269298;EFF=INTERGENIC(MODIFIER||||||||||1) FN1423-S.SNP.12:26063493 chr12:026063493 0 W/26063493-26063493 FN1423-S Single Base Substitution C-A INTERGENIC HET SNo: 1198, Mutant_ID: FN1423-S, Generation: M2, Mutations: 142, Genes: 31, Seed availability: Yes. FN669-S.SNP.12:26063872 chr12:026063872 0 W/26063872-26063872 FN669-S Single Base Substitution C-T INTERGENIC HET SNo: 605, Mutant_ID: FN669-S, Generation: M2, Mutations: 73, Genes: 27, Seed availability: Yes. FN997-S.SNP.12:26064900 chr12:026064900 0 W/26064900-26064900 FN997-S Single Base Substitution C-A INTERGENIC HOMO SNo: 900, Mutant_ID: FN997-S, Generation: M2, Mutations: 53, Genes: 8, Seed availability: Yes. FN1707-S.SNP.12:26067283 chr12:026067283 0 W/26067283-26067283 FN1707-S SNP C -> A AC=1;AN=188;BQB=0.495504;DP=3118;DP4=1668,1402,14,7;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=3.13185e-12;MQSB=0.714868;RPB=0.223881;SGB=-12.2833;VDB=0.0234794;EFF=INTERGENIC(MODIFIER||||||||||1) FN-248.SNP.12:26070815 chr12:026070815 0 W/26070815-26070815 FN-248 Single Base Substitution A-T INTERGENIC HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN3534-S.SNP.12:26070815 chr12:026070815 0 W/26070815-26070815 FN3534-S SNP A -> T AC=2;AN=188;BQB=0.769163;DP=3191;DP4=1209,1855,11,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=1.3239e-12;MQSB=0.952953;RPB=0.927598;SGB=54.0524;VDB=0.576479;EFF=INTERGENIC(MODIFIER||||||||||1) FN737-S.SNP.12:26077343 chr12:026077343 0 W/26077343-26077343 FN737-S Single Base Substitution C-T INTERGENIC HOMO SNo: 662, Mutant_ID: FN737-S, Generation: M2, Mutations: 65, Genes: 27, Seed availability: Yes. FN2707-S.SNP.12:26080476 chr12:026080476 0 W/26080476-26080476 FN2707-S SNP A -> G AC=1;AN=200;BQB=0.0621605;DP=4534;DP4=2313,1911,7,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.149e-10;MQSB=0.987007;RPB=0.73595;SGB=39.9056;VDB=0.516176;EFF=INTERGENIC(MODIFIER||||||||||1) FN4188-S.SNP.12:26091614 chr12:026091614 0 W/26091614-26091614 FN4188-S SNP T -> A AC=1;AN=170;BQB=0.941666;DP=1844;DP4=623,1180,8,7;HOB=6.92042e-05;ICB=0.000139222;MQ=45;MQ0F=0.0037961;MQB=1.25632e-05;MQSB=0.000246954;RPB=0.748403;SGB=61.2001;VDB=0.17334;EFF=INTERGENIC(MODIFIER||||||||||1) FN-293.SNP.12:26093835 chr12:026093835 0 W/26093835-26093835 FN-293 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN-293.SNP.12:26093836 chr12:026093836 0 W/26093836-26093836 FN-293 Single Base Substitution C-A UTR_3_PRIME HOMO SNo: 289, Mutant_ID: FN-293, Generation: M2, Mutations: 48, Genes: 28, Seed availability: Yes. FN1427-S.SNP.12:26095744 chr12:026095744 0 W/26095744-26095744 FN1427-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 1201, Mutant_ID: FN1427-S, Generation: M2, Mutations: 74, Genes: 18, Seed availability: Yes. FN448-S.SNP.12:26102732 chr12:026102732 0 W/26102732-26102732 FN448-S Single Base Substitution A-C INTRON HET SNo: 447, Mutant_ID: FN448-S, Generation: M2, Mutations: 70, Genes: 12, Seed availability: Yes. FN700-S.SNP.12:26103839 chr12:026103839 0 W/26103839-26103839 FN700-S Single Base Substitution A-G INTERGENIC HOMO SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN1463-S.SNP.12:26106709 chr12:026106709 0 W/26106709-26106709 FN1463-S Single Base Substitution A-G INTRON HET SNo: 1231, Mutant_ID: FN1463-S, Generation: M2, Mutations: 73, Genes: 127, Seed availability: Yes. FN2782-S.SNP.12:26114854 chr12:026114854 0 W/26114854-26114854 FN2782-S SNP C -> A AC=1;AN=198;BQB=0.678461;DP=4126;DP4=1952,1995,5,8;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.50684e-08;MQSB=0.671313;RPB=0.931446;SGB=36.5539;VDB=0.863887;EFF=INTRON(MODIFIER||||284|LOC_Os12g42110|protein_coding|CODING|LOC_Os12g42110.1|1|1) FN1304-S.SNP.12:26121959 chr12:026121959 0 W/26121959-26121959 FN1304-S Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g42130 MATE efflux family protein, putative, expressed SNo: 1112, Mutant_ID: FN1304-S, Generation: M2, Mutations: 76, Genes: 41, Seed availability: Yes. FN-97.SNP.12:26122824 chr12:026122824 0 W/26122824-26122824 FN-97 Single Base Substitution T-G UTR_3_PRIME HOMO SNo: 97, Mutant_ID: FN-97, Generation: M2, Mutations: 45, Genes: 8, Seed availability: Yes. FN3502-S.SNP.12:26123264 chr12:026123264 0 W/26123264-26123264 FN3502-S SNP A -> T AC=1;AN=188;BQB=0.997835;DP=2484;DP4=1189,1144,7,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=9.67421e-09;MQSB=0.6206;RPB=0.905829;SGB=26.0762;VDB=0.706638;EFF=INTERGENIC(MODIFIER||||||||||1) FN2681-S.SNP.12:26134875 chr12:026134875 0 W/26134875-26134875 FN2681-S SNP T -> C AC=1;AN=200;BQB=0.994486;DP=4860;DP4=2139,2479,12,22;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=3.52308e-20;MQSB=0.973219;RPB=0.999981;SGB=73.7728;VDB=0.459777;EFF=INTRON(MODIFIER||||1004|LOC_Os12g42160|protein_coding|CODING|LOC_Os12g42160.1|4|1) FN1385-S.SNP.12:26143457 chr12:026143457 0 W/26143457-26143457 FN1385-S Single Base Substitution C-T INTERGENIC HET SNo: 1171, Mutant_ID: FN1385-S, Generation: M2, Mutations: 72, Genes: 138, Seed availability: Yes. FN464-S.SNP.12:26149498 chr12:026149498 0 W/26149498-26149498 FN464-S Single Base Substitution A-C INTERGENIC HET SNo: 463, Mutant_ID: FN464-S, Generation: M2, Mutations: 72, Genes: 20, Seed availability: Yes. FN1493-S.SNP.12:26150043 chr12:026150043 0 W/26150043-26150043 FN1493-S Single Base Substitution G-A INTERGENIC HET SNo: 1254, Mutant_ID: FN1493-S, Generation: M2, Mutations: 102, Genes: 21, Seed availability: No. FN1293-S.SNP.12:26160870 chr12:026160870 0 W/26160870-26160870 FN1293-S Single Base Substitution G-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN1293-S.SNP.12:26160871 chr12:026160871 0 W/26160871-26160871 FN1293-S Single Base Substitution C-T INTERGENIC HET SNo: 1105, Mutant_ID: FN1293-S, Generation: M2, Mutations: 63, Genes: 43, Seed availability: Yes. FN239-S.SNP.12:26184816 chr12:026184816 0 W/26184816-26184816 FN239-S Single Base Substitution A-T UTR_3_PRIME HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN3514-S.SNP.12:26191153 chr12:026191153 0 W/26191153-26191153 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.982618;DP=2679;DP4=1327,1261,5,9;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=5.4844e-08;MQSB=0.965654;RPB=0.767294;SGB=58.0655;VDB=0.41004;EFF=INTERGENIC(MODIFIER||||||||||1) FN1442-S.SNP.12:26194760 chr12:026194760 0 W/26194760-26194760 FN1442-S Single Base Substitution G-T UTR_3_PRIME HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN1435-S.SNP.12:26203000 chr12:026203000 0 W/26203000-26203000 FN1435-S Single Base Substitution C-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g42230 transketolase, putative, expressed SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN621-S.SNP.12:26204952 chr12:026204952 0 W/26204952-26204952 FN621-S Single Base Substitution T-A INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN621-S.SNP.12:26204953 chr12:026204953 0 W/26204953-26204953 FN621-S Single Base Substitution G-C INTERGENIC HET SNo: 586, Mutant_ID: FN621-S, Generation: M2, Mutations: 72, Genes: 23, Seed availability: Yes. FN4117-S.SNP.12:26205187 chr12:026205187 0 W/26205187-26205187 FN4117-S SNP G -> T AC=1;AN=182;BQB=0.807424;DP=2891;DP4=1262,1512,7,9;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.7795e-06;MQSB=0.926492;RPB=0.319734;SGB=25.655;VDB=0.379028;EFF=INTERGENIC(MODIFIER||||||||||1) FN664-S.SNP.12:26205187 chr12:026205187 0 W/26205187-26205187 FN664-S Single Base Substitution G-T INTERGENIC HOMO SNo: 603, Mutant_ID: FN664-S, Generation: M2, Mutations: 46, Genes: 35, Seed availability: Yes. FN4325-S.SNP.12:26206069 chr12:026206069 0 W/26206069-26206069 FN4325-S SNP A -> T AC=1;AN=170;BQB=0.694518;DP=2327;DP4=792,1218,5,5;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=0.000600701;MQSB=0.00604443;RPB=0.903474;SGB=-4.32338;VDB=0.380974;EFF=INTERGENIC(MODIFIER||||||||||1) FN2188-S.SNP.12:26218201 chr12:026218201 0 W/26218201-26218201 FN2188-S SNP T -> C AC=2;AN=190;BQB=0.93095;DP=4776;DP4=2192,1959,29,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.18512e-19;MQSB=0.425817;RPB=0.761638;SGB=2.84045;VDB=0.401596;EFF=INTRON(MODIFIER||||607|LOC_Os12g42260|protein_coding|CODING|LOC_Os12g42260.1|6|1),INTRON(MODIFIER||||607|LOC_Os12g42260|protein_coding|CODING|LOC_Os12g42260.2|6|1) FN3863-S.SNP.12:26221195 chr12:026221195 0 W/26221195-26221195 FN3863-S SNP G -> A AC=1;AN=158;BQB=0.798407;DP=2518;DP4=989,1415,4,8;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.27196e-06;MQSB=0.960291;RPB=0.949501;SGB=30.704;VDB=0.793867;EFF=INTRON(MODIFIER||||607|LOC_Os12g42260|protein_coding|CODING|LOC_Os12g42260.1|1|1),INTRON(MODIFIER||||607|LOC_Os12g42260|protein_coding|CODING|LOC_Os12g42260.2|1|1) FN736-S.SNP.12:26234360 chr12:026234360 0 W/26234360-26234360 FN736-S Single Base Substitution C-A INTERGENIC HET SNo: 661, Mutant_ID: FN736-S, Generation: M2, Mutations: 54, Genes: 12, Seed availability: Yes. FN2734-S.SNP.12:26234662 chr12:026234662 0 W/26234662-26234662 FN2734-S SNP G -> A AC=1;AN=200;BQB=0.980954;DP=4882;DP4=2258,2341,14,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.66176e-15;MQSB=0.988558;RPB=0.626594;SGB=87.1368;VDB=0.187218;EFF=INTERGENIC(MODIFIER||||||||||1) CW-631-3-1.SNP.12:26244838 chr12:026244838 0 W/26244838-26244838 CW-631-3-1 Single Base Substitution G-T INTERGENIC HET SNo: 1371, Mutant_ID: CW-631-3-1, Generation: M2, Mutations: 74, Genes: 21, Seed availability: Yes. FN2261-S.SNP.12:26251806 chr12:026251806 0 W/26251806-26251806 FN2261-S SNP A -> G AC=1;AN=190;BQB=0.735894;DP=4888;DP4=2307,2266,20,23;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.17897e-24;MQSB=0.261956;RPB=0.474193;SGB=142.717;VDB=0.139768;EFF=INTERGENIC(MODIFIER||||||||||1) FN1332-S.SNP.12:26254585 chr12:026254585 0 W/26254585-26254585 FN1332-S Single Base Substitution T-A INTERGENIC HET SNo: 1133, Mutant_ID: FN1332-S, Generation: M2, Mutations: 70, Genes: 60, Seed availability: Yes. FN-228.SNP.12:26254693 chr12:026254693 0 W/26254693-26254693 FN-228 Single Base Substitution G-A INTERGENIC HET SNo: 227, Mutant_ID: FN-228, Generation: M2, Mutations: 48, Genes: 8, Seed availability: Yes. FN2207-S.SNP.12:26256567 chr12:026256567 0 W/26256567-26256567 FN2207-S SNP G -> A AC=1;AN=190;BQB=0.838596;DP=4721;DP4=2356,2096,6,8;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.03518e-09;MQSB=0.973696;RPB=0.99441;SGB=21.1058;VDB=0.924453;EFF=INTERGENIC(MODIFIER||||||||||1) FN812-S.SNP.12:26258647 chr12:026258647 0 W/26258647-26258647 FN812-S Single Base Substitution G-A INTERGENIC HET SNo: 730, Mutant_ID: FN812-S, Generation: M2, Mutations: 54, Genes: 16, Seed availability: Yes. FN1368-S.SNP.12:26261684 chr12:026261684 0 W/26261684-26261684 FN1368-S Single Base Substitution A-G INTERGENIC HOMO SNo: 1157, Mutant_ID: FN1368-S, Generation: M2, Mutations: 65, Genes: 8, Seed availability: Yes. FN2774-S.SNP.12:26262664 chr12:026262664 0 W/26262664-26262664 FN2774-S SNP T -> G AC=2;AN=198;BQB=0.337601;DP=4134;DP4=1778,2074,28,23;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.2426e-28;MQSB=0.848228;RPB=0.7596;SGB=173.168;VDB=0.248985;EFF=INTERGENIC(MODIFIER||||||||||1) FN480-S.SNP.12:26264182 chr12:026264182 0 W/26264182-26264182 FN480-S Single Base Substitution C-A INTERGENIC HOMO SNo: 479, Mutant_ID: FN480-S, Generation: M2, Mutations: 66, Genes: 149, Seed availability: Yes. FN2433.SNP.12:26267343 chr12:026267343 0 W/26267343-26267343 FN2433 SNP C -> T AC=1;AN=200;BQB=0.273457;DP=5084;DP4=2604,2202,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.00083e-12;MQSB=0.818068;RPB=0.942817;SGB=47.7211;VDB=0.560696;EFF=INTERGENIC(MODIFIER||||||||||1) FN810-S.SNP.12:26269869 chr12:026269869 0 W/26269869-26269869 FN810-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN810-S.SNP.12:26269870 chr12:026269870 0 W/26269870-26269870 FN810-S Single Base Substitution G-C NON_SYNONYMOUS_CODING HET LOC_Os12g42280 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed SNo: 728, Mutant_ID: FN810-S, Generation: M2, Mutations: 79, Genes: 31, Seed availability: Yes. FN2260-S.SNP.12:26277750 chr12:026277750 0 W/26277750-26277750 FN2260-S SNP C -> T AC=1;AN=190;BQB=0.817681;DP=4907;DP4=2410,2107,19,16;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.1575e-20;MQSB=0.0659767;RPB=0.918796;SGB=153.834;VDB=0.476424;EFF=INTERGENIC(MODIFIER||||||||||1) FN2295.SNP.12:26280709 chr12:026280709 0 W/26280709-26280709 FN2295 SNP A -> G AC=1;AN=192;BQB=0.756879;DP=4998;DP4=2079,2611,9,9;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=8.05315e-09;MQSB=0.989453;RPB=0.870246;SGB=54.0374;VDB=0.135926;EFF=INTERGENIC(MODIFIER||||||||||1) FN488-S.SNP.12:26282178 chr12:026282178 0 W/26282178-26282178 FN488-S Single Base Substitution C-T INTERGENIC HET SNo: 486, Mutant_ID: FN488-S, Generation: M2, Mutations: 78, Genes: 53, Seed availability: Yes. FN3707-S.SNP.12:26290241 chr12:026290241 0 W/26290241-26290241 FN3707-S SNP C -> A AC=1;AN=190;BQB=0.927417;DP=2764;DP4=1338,1290,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.78543e-07;MQSB=0.99169;RPB=0.767303;SGB=44.5415;VDB=0.67433;EFF=INTERGENIC(MODIFIER||||||||||1) FN3985-S.SNP.12:26296076 chr12:026296076 0 W/26296076-26296076 FN3985-S SNP G -> T AC=2;AN=168;BQB=0.766301;DP=2514;DP4=1237,1147,13,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=1.10606e-16;MQSB=0.99866;RPB=0.312858;SGB=110.226;VDB=0.67001;EFF=INTERGENIC(MODIFIER||||||||||1) FN774-S.SNP.12:26297853 chr12:026297853 0 W/26297853-26297853 FN774-S Single Base Substitution T-A INTERGENIC HET SNo: 695, Mutant_ID: FN774-S, Generation: M2, Mutations: 65, Genes: 16, Seed availability: Yes. FN3860-S.SNP.12:26303622 chr12:026303622 0 W/26303622-26303622 FN3860-S SNP G -> A AC=2;AN=158;BQB=0.97735;DP=2563;DP4=1351,1108,15,16;HOB=0.024996;ICB=0.493752;MQ=49;MQ0F=0;MQB=6.43684e-17;MQSB=0.999654;RPB=0.849683;SGB=130.087;VDB=0.311973;EFF=INTRON(MODIFIER||||791|LOC_Os12g42300|protein_coding|CODING|LOC_Os12g42300.1|7|1) FN516-S.SNP.12:26313138 chr12:026313138 0 W/26313138-26313138 FN516-S Single Base Substitution G-A INTRON HOMO SNo: 514, Mutant_ID: FN516-S, Generation: M2, Mutations: 66, Genes: 73, Seed availability: Yes. FN2639-S.SNP.12:26320604 chr12:026320604 0 W/26320604-26320604 FN2639-S SNP C -> T AC=1;AN=200;BQB=0.919213;DP=4565;DP4=2069,2176,11,19;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.43721e-18;MQSB=0.584804;RPB=0.950321;SGB=132.552;VDB=0.305644;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcC/gcT|A220|427|LOC_Os12g42330|protein_coding|CODING|LOC_Os12g42330.1|1|1) FN1182-S.SNP.12:26325271 chr12:026325271 0 W/26325271-26325271 FN1182-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HET LOC_Os12g42340 OsFBX464 - F-box domain containing protein, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN3740-S.SNP.12:26329543 chr12:026329543 0 W/26329543-26329543 FN3740-S SNP C -> G AC=2;AN=190;BQB=0.542267;DP=3490;DP4=1143,1822,29,7;HOB=0.020831;ICB=0.494793;MQ=27;MQ0F=0.101146;MQB=0.948434;MQSB=3.19444e-12;RPB=0.00438774;SGB=-247.098;VDB=0.537869;EFF=INTERGENIC(MODIFIER||||||||||1) FN1380-S.SNP.12:26330745 chr12:026330745 0 W/26330745-26330745 FN1380-S Single Base Substitution C-G NON_SYNONYMOUS_CODING HET LOC_Os12g42360 expressed protein SNo: 1166, Mutant_ID: FN1380-S, Generation: M2, Mutations: 66, Genes: 137, Seed availability: Yes. FN4121-S.SNP.12:26332686 chr12:026332686 0 W/26332686-26332686 FN4121-S SNP G -> T AC=1;AN=180;BQB=0.328772;DP=2490;DP4=1140,1275,7,2;HOB=6.17284e-05;ICB=0.000124143;MQ=49;MQ0F=0;MQB=0.00471834;MQSB=0.992515;RPB=0.987117;SGB=21.5845;VDB=0.0705146;EFF=INTERGENIC(MODIFIER||||||||||1) FN-269.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN-269 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g42370 GTPase of unknown function domain containing protein, putative, expressed SNo: 268, Mutant_ID: FN-269, Generation: M2, Mutations: 72, Genes: 170, Seed availability: Yes. FN-30.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN-30 Single Base Substitution C-T NON_SYNONYMOUS_CODING Homo LOC_Os12g42370 GTPase of unknown function domain containing protein, putative, expressed SNo: 30, Mutant_ID: FN-30, Generation: M2, Mutations: 50, Genes: 73, Seed availability: Yes. FN2575-S.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN2575-S SNP C -> T AC=1;AN=198;BQB=0.894655;DP=4205;DP4=2059,1904,15,24;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=7.33007e-23;MQSB=0.796607;RPB=0.885169;SGB=173.617;VDB=0.440098;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A213T|598|LOC_Os12g42370|protein_coding|CODING|LOC_Os12g42370.1|6|1) FN3383-S.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN3383-S SNP C -> T AC=2;AN=184;BQB=0.452939;DP=2774;DP4=1281,1325,19,20;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.87306e-18;MQSB=0.999553;RPB=0.837;SGB=170.831;VDB=0.405876;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A213T|598|LOC_Os12g42370|protein_coding|CODING|LOC_Os12g42370.1|6|1) FN3454-S.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN3454-S SNP C -> T AC=2;AN=184;BQB=0.584246;DP=2603;DP4=1252,1217,11,12;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=6.5769e-10;MQSB=0.984394;RPB=0.61196;SGB=70.9657;VDB=0.855458;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A213T|598|LOC_Os12g42370|protein_coding|CODING|LOC_Os12g42370.1|6|1) FN3776-S.SNP.12:26336025 chr12:026336025 0 W/26336025-26336025 FN3776-S SNP C -> T AC=2;AN=190;BQB=0.808096;DP=2687;DP4=1280,1278,8,13;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.32499e-10;MQSB=0.991338;RPB=0.823186;SGB=90.0802;VDB=0.952453;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gct/Act|A213T|598|LOC_Os12g42370|protein_coding|CODING|LOC_Os12g42370.1|6|1) FN777-S.SNP.12:26339169 chr12:026339169 0 W/26339169-26339169 FN777-S Single Base Substitution C-G INTERGENIC HET SNo: 698, Mutant_ID: FN777-S, Generation: M2, Mutations: 39, Genes: 20, Seed availability: Yes. FN3404-S.SNP.12:26339484 chr12:026339484 0 W/26339484-26339484 FN3404-S SNP T -> C AC=1;AN=184;BQB=0.897736;DP=2541;DP4=1254,1212,6,3;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=2.97292e-06;MQSB=0.997569;RPB=0.47721;SGB=8.14452;VDB=0.704456;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cAt/cGt|H149R|155|LOC_Os12g42380|protein_coding|CODING|LOC_Os12g42380.1|2|1) FN-31.SNP.12:26341743 chr12:026341743 0 W/26341743-26341743 FN-31 Single Base Substitution G-A INTERGENIC Homo SNo: 31, Mutant_ID: FN-31, Generation: M2, Mutations: 32, Genes: 14, Seed availability: Yes. FN2167-S.SNP.12:26346025 chr12:026346025 0 W/26346025-26346025 FN2167-S SNP G -> A AC=1;AN=168;BQB=0.000557115;DP=2802;DP4=1011,1721,6,6;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=0.000887885;MQSB=0.983731;RPB=0.700633;SGB=-1.53256;VDB=0.906888;EFF=INTERGENIC(MODIFIER||||||||||1) FN815-S.SNP.12:26357566 chr12:026357566 0 W/26357566-26357566 FN815-S Single Base Substitution T-C INTERGENIC HET SNo: 733, Mutant_ID: FN815-S, Generation: M2, Mutations: 52, Genes: 197, Seed availability: Yes. FN1561-S.SNP.12:26357669 chr12:026357669 0 W/26357669-26357669 FN1561-S Single Base Substitution A-T INTERGENIC Homo SNo: 1304, Mutant_ID: FN1561-S, Generation: M2, Mutations: 127, Genes: 24, Seed availability: Yes. FN3443-S.SNP.12:26364371 chr12:026364371 0 W/26364371-26364371 FN3443-S SNP G -> C AC=1;AN=184;BQB=0.93193;DP=3471;DP4=1670,1718,6,13;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=6.04646e-12;MQSB=0.719358;RPB=0.197338;SGB=80.3949;VDB=0.0543833;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|caC/caG|H252Q|365|LOC_Os12g42420|protein_coding|CODING|LOC_Os12g42420.1|1|1) FN952-S.SNP.12:26365987 chr12:026365987 0 W/26365987-26365987 FN952-S Single Base Substitution C-T INTERGENIC HET SNo: 858, Mutant_ID: FN952-S, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-207.SNP.12:26376399 chr12:026376399 0 W/26376399-26376399 FN-207 Single Base Substitution A-C INTERGENIC HET SNo: 207, Mutant_ID: FN-207, Generation: M2, Mutations: 64, Genes: 409, Seed availability: Yes. FN3748-S.SNP.12:26388766 chr12:026388766 0 W/26388766-26388766 FN3748-S SNP G -> A AC=1;AN=190;BQB=0.865574;DP=2536;DP4=1124,1310,9,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.0045e-07;MQSB=0.989189;RPB=0.712352;SGB=39.6545;VDB=0.738512;EFF=INTERGENIC(MODIFIER||||||||||1) FN1549-S.SNP.12:26396582 chr12:026396582 0 W/26396582-26396582 FN1549-S Single Base Substitution T-C INTERGENIC HET SNo: 1295, Mutant_ID: FN1549-S, Generation: M2, Mutations: 69, Genes: 33, Seed availability: Yes. FN3835-S.SNP.12:26399536 chr12:026399536 0 W/26399536-26399536 FN3835-S SNP C -> T AC=1;AN=190;BQB=0.904226;DP=3429;DP4=1783,1538,6,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=5.64454e-05;MQSB=0.993524;RPB=0.974399;SGB=21.8853;VDB=0.380722;EFF=INTERGENIC(MODIFIER||||||||||1) FN3632-S.SNP.12:26400197 chr12:026400197 0 W/26400197-26400197 FN3632-S SNP T -> G AC=2;AN=190;BQB=0.998064;DP=3061;DP4=1350,1575,22,19;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.63153e-23;MQSB=0.0802703;RPB=0.947832;SGB=90.0605;VDB=0.399323;EFF=INTERGENIC(MODIFIER||||||||||1) FN369-S.SNP.12:26402118 chr12:026402118 0 W/26402118-26402118 FN369-S Single Base Substitution A-T INTERGENIC HET SNo: 358, Mutant_ID: FN369-S, Generation: M2, Mutations: 64, Genes: 92, Seed availability: Yes. FN4234-S.SNP.12:26404868 chr12:026404868 0 W/26404868-26404868 FN4234-S SNP T -> C AC=1;AN=170;BQB=0.692967;DP=2405;DP4=1132,1088,6,4;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=8.21096e-07;MQSB=0.996808;RPB=0.762387;SGB=38.987;VDB=0.585652;EFF=INTERGENIC(MODIFIER||||||||||1) FN1571-S.SNP.12:26409520 chr12:026409520 0 W/26409520-26409520 FN1571-S Single Base Substitution A-G INTERGENIC HET SNo: 1310, Mutant_ID: FN1571-S, Generation: M2, Mutations: 90, Genes: 12, Seed availability: Yes. FN4138-S.SNP.12:26423445 chr12:026423445 0 W/26423445-26423445 FN4138-S SNP G -> A AC=2;AN=170;BQB=0.669728;DP=2522;DP4=1266,1125,11,7;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=3.38551e-08;MQSB=0.951072;RPB=0.873586;SGB=74.528;VDB=0.0337026;EFF=INTERGENIC(MODIFIER||||||||||1) FN786-S.SNP.12:26423959 chr12:026423959 0 W/26423959-26423959 FN786-S Single Base Substitution A-G INTERGENIC HET SNo: 707, Mutant_ID: FN786-S, Generation: M2, Mutations: 78, Genes: 165, Seed availability: Yes. FN3485-S.SNP.12:26426792 chr12:026426792 0 W/26426792-26426792 FN3485-S SNP A -> G AC=2;AN=184;BQB=0.906785;DP=2736;DP4=963,1533,11,22;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=5.6695e-17;MQSB=0.937331;RPB=0.47498;SGB=68.6673;VDB=0.21238;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V50A|299|LOC_Os12g42550|protein_coding|CODING|LOC_Os12g42550.2|2|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTt/gCt|V54A|303|LOC_Os12g42550|protein_coding|CODING|LOC_Os12g42550.1|2|1) FN2407.SNP.12:26429925 chr12:026429925 0 W/26429925-26429925 FN2407 SNP G -> C AC=1;AN=200;BQB=0.143084;DP=3892;DP4=1756,1789,9,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.38027e-12;MQSB=0.999988;RPB=0.984488;SGB=15.9106;VDB=0.0714498;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q8E|303|LOC_Os12g42550|protein_coding|CODING|LOC_Os12g42550.1|1|1),NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cag/Gag|Q8E|299|LOC_Os12g42550|protein_coding|CODING|LOC_Os12g42550.2|1|1) FN-407.SNP.12:26433231 chr12:026433231 0 W/26433231-26433231 FN-407 Single Base Substitution A-T INTERGENIC HOMO SNo: 400, Mutant_ID: FN-407, Generation: M2, Mutations: 59, Genes: 178, Seed availability: Yes. FN407-S.SNP.12:26433231 chr12:026433231 0 W/26433231-26433231 FN407-S Single Base Substitution A-T INTERGENIC HOMO SNo: 401, Mutant_ID: FN407-S, Generation: M2, Mutations: 61, Genes: 175, Seed availability: Yes. FN1286-S.SNP.12:26434056 chr12:026434056 0 W/26434056-26434056 FN1286-S Single Base Substitution A-T SYNONYMOUS_CODING HOMO SNo: 1100, Mutant_ID: FN1286-S, Generation: M2, Mutations: 65, Genes: 15, Seed availability: Yes. FN3316-S.SNP.12:26434290 chr12:026434290 0 W/26434290-26434290 FN3316-S SNP G -> A AC=2;AN=184;BQB=0.999169;DP=2837;DP4=1464,1274,13,16;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=4.83906e-18;MQSB=0.872344;RPB=0.747102;SGB=125.613;VDB=0.539655;EFF=SYNONYMOUS_CODING(LOW|SILENT|gaC/gaT|D556|753|LOC_Os12g42570|protein_coding|CODING|LOC_Os12g42570.1|4|1) FN3658-S.SNP.12:26434711 chr12:026434711 0 W/26434711-26434711 FN3658-S SNP A -> T AC=2;AN=190;BQB=0.765628;DP=2785;DP4=1258,1369,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=7.87857e-09;MQSB=0.975979;RPB=0.751609;SGB=57.4238;VDB=0.644391;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tTt/tAt|F416Y|753|LOC_Os12g42570|protein_coding|CODING|LOC_Os12g42570.1|4|1) FN2181-S.SNP.12:26435119 chr12:026435119 0 W/26435119-26435119 FN2181-S SNP G -> A AC=1;AN=190;BQB=0.458527;DP=4937;DP4=2267,2334,11,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=6.44118e-10;MQSB=0.855207;RPB=0.630383;SGB=53.8699;VDB=0.732696;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tCt/tTt|S324F|753|LOC_Os12g42570|protein_coding|CODING|LOC_Os12g42570.1|3|1) FN2656-S.SNP.12:26436879 chr12:026436879 0 W/26436879-26436879 FN2656-S SNP G -> A AC=1;AN=200;BQB=0.58015;DP=5015;DP4=2389,2287,17,14;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=4.36826e-17;MQSB=0.999208;RPB=0.259444;SGB=65.9573;VDB=0.567572;EFF=INTRON(MODIFIER||||753|LOC_Os12g42570|protein_coding|CODING|LOC_Os12g42570.1|1|1) FN1759-S.SNP.12:26444643 chr12:026444643 0 W/26444643-26444643 FN1759-S SNP T -> G AC=1;AN=188;BQB=0.941584;DP=3519;DP4=2032,1459,10,2;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.12079e-08;MQSB=0.9901;RPB=0.96108;SGB=32.441;VDB=0.43896;EFF=INTERGENIC(MODIFIER||||||||||1) FN3697-S.SNP.12:26448206 chr12:026448206 0 W/26448206-26448206 FN3697-S SNP T -> C AC=1;AN=190;BQB=0.938032;DP=2549;DP4=1260,1161,4,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=4.76023e-06;MQSB=0.996721;RPB=0.996255;SGB=21.8853;VDB=0.178903;EFF=INTERGENIC(MODIFIER||||||||||1) FN-384.SNP.12:26454689 chr12:026454689 0 W/26454689-26454689 FN-384 Single Base Substitution A-T INTERGENIC HET SNo: 371, Mutant_ID: FN-384, Generation: M2, Mutations: 38, Genes: 9, Seed availability: Yes. FN1431-S.SNP.12:26455980 chr12:026455980 0 W/26455980-26455980 FN1431-S Single Base Substitution T-C INTRON HET SNo: 1204, Mutant_ID: FN1431-S, Generation: M2, Mutations: 53, Genes: 17, Seed availability: No. FN1441-S.SNP.12:26458513 chr12:026458513 0 W/26458513-26458513 FN1441-S Single Base Substitution T-C INTRON HET SNo: 1212, Mutant_ID: FN1441-S, Generation: M2, Mutations: 64, Genes: 12, Seed availability: Yes. FN1732-S.SNP.12:26462426 chr12:026462426 0 W/26462426-26462426 FN1732-S SNP G -> A AC=2;AN=188;BQB=0.999496;DP=3462;DP4=1658,1728,26,29;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=4.70554e-27;MQSB=0.995976;RPB=0.863768;SGB=142.743;VDB=0.0462178;EFF=INTERGENIC(MODIFIER||||||||||1) FN2575-S.SNP.12:26463238 chr12:026463238 0 W/26463238-26463238 FN2575-S SNP T -> C AC=1;AN=198;BQB=0.960816;DP=4157;DP4=1982,1887,19,13;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.17481e-18;MQSB=0.998688;RPB=0.626162;SGB=68.2711;VDB=0.349121;EFF=INTERGENIC(MODIFIER||||||||||1) W502-3-4.SNP.12:26465380 chr12:026465380 0 W/26465380-26465380 W502-3-4 Single Base Substitution T-C INTERGENIC HET SNo: 1424, Mutant_ID: W502-3-4, Generation: M2, Mutations: 50, Genes: 18, Seed availability: Yes. FN1229-S.SNP.12:26465567 chr12:026465567 0 W/26465567-26465567 FN1229-S Single Base Substitution G-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN1229-S.SNP.12:26465568 chr12:026465568 0 W/26465568-26465568 FN1229-S Single Base Substitution C-T INTERGENIC HET SNo: 1054, Mutant_ID: FN1229-S, Generation: M2, Mutations: 62, Genes: 23, Seed availability: Yes. FN-65.SNP.12:26467600 chr12:026467600 0 W/26467600-26467600 FN-65 Single Base Substitution A-G INTERGENIC HOMO SNo: 65, Mutant_ID: FN-65, Generation: M2, Mutations: 41, Genes: 12, Seed availability: Yes. FN3417-S.SNP.12:26474494 chr12:026474494 0 W/26474494-26474494 FN3417-S SNP G -> A AC=1;AN=184;BQB=0.915676;DP=2400;DP4=1127,1187,9,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.27328e-08;MQSB=0.999925;RPB=0.928725;SGB=53.2642;VDB=0.135519;EFF=INTERGENIC(MODIFIER||||||||||1) FN-19.SNP.12:26478273 chr12:026478273 0 W/26478273-26478273 FN-19 Single Base Substitution C-T INTRON Homo SNo: 19, Mutant_ID: FN-19, Generation: M2, Mutations: 25, Genes: 9, Seed availability: Yes. FN3658-S.SNP.12:26478859 chr12:026478859 0 W/26478859-26478859 FN3658-S SNP C -> T AC=2;AN=190;BQB=0.668732;DP=3615;DP4=1975,1478,8,11;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.77891e-10;MQSB=0.915733;RPB=0.889918;SGB=57.4238;VDB=0.921824;EFF=INTRON(MODIFIER||||207|LOC_Os12g42610|protein_coding|CODING|LOC_Os12g42610.1|1|1) FN1047-S.SNP.12:26479204 chr12:026479204 0 W/26479204-26479204 FN1047-S Single Base Substitution G-A INTRON HET SNo: 941, Mutant_ID: FN1047-S, Generation: M2, Mutations: 69, Genes: 34, Seed availability: Yes. FN-248.SNP.12:26481265 chr12:026481265 0 W/26481265-26481265 FN-248 Single Base Substitution G-A INTRON HOMO SNo: 247, Mutant_ID: FN-248, Generation: M2, Mutations: 60, Genes: 235, Seed availability: Yes. FN-137.SNP.12:26482482 chr12:026482482 0 W/26482482-26482482 FN-137 Single Base Substitution A-G INTRON HOMO SNo: 137, Mutant_ID: FN-137, Generation: M2, Mutations: 59, Genes: 16, Seed availability: Yes. FN4160-S.SNP.12:26490563 chr12:026490563 0 W/26490563-26490563 FN4160-S SNP G -> A AC=2;AN=170;BQB=0.847294;DP=2791;DP4=1420,1288,13,14;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=8.16203e-15;MQSB=0.999253;RPB=0.961408;SGB=83.0751;VDB=0.321807;EFF=SYNONYMOUS_CODING(LOW|SILENT|caC/caT|H24|82|LOC_Os12g42620|protein_coding|CODING|LOC_Os12g42620.1|1|1) FN1212-S.SNP.12:26498362 chr12:026498362 0 W/26498362-26498362 FN1212-S Single Base Substitution T-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g42630 transposon protein, putative, Mutator sub-class, expressed SNo: 1041, Mutant_ID: FN1212-S, Generation: M2, Mutations: 76, Genes: 63, Seed availability: Yes. FN1118-S.SNP.12:26501376 chr12:026501376 0 W/26501376-26501376 FN1118-S Single Base Substitution A-T INTRON HET SNo: 990, Mutant_ID: FN1118-S, Generation: M2, Mutations: 73, Genes: 26, Seed availability: Yes. FN_N1-119-1.SNP.12:26503054 chr12:026503054 0 W/26503054-26503054 FN_N1-119-1 Single Base Substitution A-G Homo SNo: 1375, Mutant_ID: FN_N1-119-1, Generation: M3, Mutations: 49, Genes: 7, Seed availability: Yes. FN-143.SNP.12:26503795 chr12:026503795 0 W/26503795-26503795 FN-143 Single Base Substitution T-G NON_SYNONYMOUS_CODING HET LOC_Os12g42640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 143, Mutant_ID: FN-143, Generation: M2, Mutations: 43, Genes: 43, Seed availability: Yes. FN2662-S.SNP.12:26509811 chr12:026509811 0 W/26509811-26509811 FN2662-S SNP A -> G AC=2;AN=200;BQB=0.23568;DP=4650;DP4=2223,2102,21,17;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=1.07556e-23;MQSB=0.910866;RPB=0.656587;SGB=84.1935;VDB=0.0125037;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gAc/gGc|D572G|1021|LOC_Os12g42660|protein_coding|CODING|LOC_Os12g42660.1|5|1) FN3760-S.SNP.12:26514748 chr12:026514748 0 W/26514748-26514748 FN3760-S SNP A -> T AC=1;AN=190;BQB=0.981719;DP=2564;DP4=1179,1221,4,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=3.2978e-06;MQSB=0.992138;RPB=0.524105;SGB=13.4442;VDB=0.0754608;EFF=INTERGENIC(MODIFIER||||||||||1) FN3760-S.SNP.12:26514749 chr12:026514749 0 W/26514749-26514749 FN3760-S SNP A -> T AC=1;AN=190;BQB=0.9326;DP=2573;DP4=1198,1245,5,5;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=7.83413e-07;MQSB=0.981179;RPB=0.921384;SGB=10.8904;VDB=0.206708;EFF=INTERGENIC(MODIFIER||||||||||1) FN2588-S.SNP.12:26520493 chr12:026520493 0 W/26520493-26520493 FN2588-S SNP G -> T AC=1;AN=198;BQB=0.970146;DP=4025;DP4=1824,1899,7,11;HOB=5.10152e-05;ICB=0.000102546;MQ=35;MQ0F=0.0631056;MQB=0.972528;MQSB=0.869071;RPB=0.994972;SGB=31.9395;VDB=0.77062;EFF=SYNONYMOUS_CODING(LOW|SILENT|gcG/gcT|A840|1757|LOC_Os12g42680|protein_coding|CODING|LOC_Os12g42680.1|3|1) FN3857-S.SNP.12:26521361 chr12:026521361 0 W/26521361-26521361 FN3857-S SNP G -> A AC=1;AN=158;BQB=0.753047;DP=2479;DP4=1278,1128,8,2;HOB=8.01154e-05;ICB=0.000161245;MQ=48;MQ0F=0.00403388;MQB=0.000350414;MQSB=0.0299038;RPB=0.903452;SGB=38.3284;VDB=0.952152;EFF=INTRON(MODIFIER||||1757|LOC_Os12g42680|protein_coding|CODING|LOC_Os12g42680.1|3|1) FN2146-S.SNP.12:26527347 chr12:026527347 0 W/26527347-26527347 FN2146-S SNP G -> C AC=1;AN=168;BQB=0.0641101;DP=1592;DP4=767,775,3,8;HOB=7.08617e-05;ICB=0.000142567;MQ=45;MQ0F=0.00565327;MQB=0.0169624;MQSB=0.000284316;RPB=0.975808;SGB=-2.96336;VDB=0.209865;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|tgC/tgG|C104W|941|LOC_Os12g42690|protein_coding|CODING|LOC_Os12g42690.1|1|1) FN1514-S.SNP.12:26527945 chr12:026527945 0 W/26527945-26527945 FN1514-S Single Base Substitution C-T INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN4037-S.SNP.12:26531465 chr12:026531465 0 W/26531465-26531465 FN4037-S SNP A -> G AC=1;AN=168;BQB=0.945039;DP=2806;DP4=1406,1282,8,4;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=7.73337e-08;MQSB=0.909059;RPB=0.999988;SGB=14.8923;VDB=0.674631;EFF=INTRON(MODIFIER||||620|LOC_Os12g42700|protein_coding|CODING|LOC_Os12g42700.1|2|1) FN-256.SNP.12:26537237 chr12:026537237 0 W/26537237-26537237 FN-256 Single Base Substitution C-G INTRON HET SNo: 255, Mutant_ID: FN-256, Generation: M2, Mutations: 50, Genes: 6, Seed availability: Yes. FN4064-S.SNP.12:26541944 chr12:026541944 0 W/26541944-26541944 FN4064-S SNP G -> A AC=1;AN=168;BQB=0.930669;DP=1841;DP4=583,1183,1,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.47687e-05;MQSB=0.0618446;RPB=0.817935;SGB=30.0193;VDB=0.121126;EFF=INTERGENIC(MODIFIER||||||||||1) FN732-S.SNP.12:26549663 chr12:026549663 0 W/26549663-26549663 FN732-S Single Base Substitution G-A INTRON HET SNo: 657, Mutant_ID: FN732-S, Generation: M2, Mutations: 61, Genes: 27, Seed availability: Yes. FN2430.SNP.12:26553517 chr12:026553517 0 W/26553517-26553517 FN2430 SNP G -> T AC=2;AN=200;BQB=0.799925;DP=4844;DP4=2188,2248,33,11;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=7.99886e-21;MQSB=0.437735;RPB=0.672003;SGB=-45.976;VDB=0.585028;EFF=INTRON(MODIFIER||||549|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.1|7|1),INTRON(MODIFIER||||494|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.2|7|1),INTRON(MODIFIER||||458|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.3|9|1),INTRON(MODIFIER||||458|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.4|9|1) FN2430.SNP.12:26553518 chr12:026553518 0 W/26553518-26553518 FN2430 SNP C -> T AC=2;AN=200;BQB=0.74873;DP=4857;DP4=2234,2241,29,9;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=3.04099e-23;MQSB=0.430203;RPB=0.82333;SGB=169.394;VDB=0.540992;EFF=INTRON(MODIFIER||||549|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.1|7|1),INTRON(MODIFIER||||494|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.2|7|1),INTRON(MODIFIER||||458|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.3|9|1),INTRON(MODIFIER||||458|LOC_Os12g42730|protein_coding|CODING|LOC_Os12g42730.4|9|1) FN836-S.SNP.12:26562552 chr12:026562552 0 W/26562552-26562552 FN836-S Single Base Substitution T-A INTERGENIC HET SNo: 748, Mutant_ID: FN836-S, Generation: M2, Mutations: 75, Genes: 23, Seed availability: Yes. W247-2-1.SNP.12:26562552 chr12:026562552 0 W/26562552-26562552 W247-2-1 Single Base Substitution T-A INTERGENIC HET SNo: 1400, Mutant_ID: W247-2-1, Generation: M2, Mutations: 68, Genes: 55, Seed availability: Yes. FN1442-S.SNP.12:26568237 chr12:026568237 0 W/26568237-26568237 FN1442-S Single Base Substitution T-G INTERGENIC HET SNo: 1213, Mutant_ID: FN1442-S, Generation: M2, Mutations: 69, Genes: 9, Seed availability: Yes. FN-303.SNP.12:26575150 chr12:026575150 0 W/26575150-26575150 FN-303 Single Base Substitution G-A INTERGENIC HOMO SNo: 298, Mutant_ID: FN-303, Generation: M2, Mutations: 46, Genes: 26, Seed availability: Yes. FN-338.SNP.12:26576122 chr12:026576122 0 W/26576122-26576122 FN-338 Single Base Substitution C-T INTERGENIC HET SNo: 330, Mutant_ID: FN-338, Generation: M2, Mutations: 43, Genes: 3, Seed availability: Yes. FN1240-S.SNP.12:26577042 chr12:026577042 0 W/26577042-26577042 FN1240-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1063, Mutant_ID: FN1240-S, Generation: M2, Mutations: 62, Genes: 27, Seed availability: Yes. FN4044-S.SNP.12:26578008 chr12:026578008 0 W/26578008-26578008 FN4044-S SNP G -> A AC=1;AN=168;BQB=0.976129;DP=2555;DP4=1571,728,11,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=2.96422e-07;MQSB=0.83003;RPB=0.460594;SGB=29.4772;VDB=0.532093;EFF=UTR_5_PRIME(MODIFIER||1010||487|LOC_Os12g42760|protein_coding|CODING|LOC_Os12g42760.1|1|1) FN-235.SNP.12:26586218 chr12:026586218 0 W/26586218-26586218 FN-235 Single Base Substitution C-T INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN1760-S.SNP.12:26586436 chr12:026586436 0 W/26586436-26586436 FN1760-S SNP A -> C AC=1;AN=188;BQB=0.00097998;DP=3578;DP4=2036,1487,6,18;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=4.89303e-07;MQSB=0.954324;RPB=0.427147;SGB=-238.957;VDB=0.778732;EFF=INTERGENIC(MODIFIER||||||||||1) FN470-S.SNP.12:26586463 chr12:026586463 0 W/26586463-26586463 FN470-S Single Base Substitution G-C INTERGENIC HET SNo: 469, Mutant_ID: FN470-S, Generation: M2, Mutations: 58, Genes: 13, Seed availability: Yes. FN1011-S.SNP.12:26589654 chr12:026589654 0 W/26589654-26589654 FN1011-S Single Base Substitution C-A INTERGENIC HET SNo: 911, Mutant_ID: FN1011-S, Generation: M2, Mutations: 84, Genes: 153, Seed availability: No. FN3848-S.SNP.12:26594993 chr12:026594993 0 W/26594993-26594993 FN3848-S SNP G -> A AC=1;AN=158;BQB=0.904548;DP=2594;DP4=1068,1414,5,6;HOB=8.01154e-05;ICB=0.000161245;MQ=29;MQ0F=0.0709329;MQB=0.997486;MQSB=0.590997;RPB=0.938951;SGB=42.6978;VDB=0.910182;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Ggc/Agc|G156S|227|LOC_Os12g42800|protein_coding|CODING|LOC_Os12g42800.1|1|1) FN4068-S.SNP.12:26595929 chr12:026595929 0 W/26595929-26595929 FN4068-S SNP G -> A AC=1;AN=182;BQB=0.999469;DP=2877;DP4=1572,1235,12,4;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0625652;MQB=0.866201;MQSB=1.82125e-13;RPB=0.99938;SGB=66.6657;VDB=0.180085;EFF=INTERGENIC(MODIFIER||||||||||1) FN2731-S.SNP.12:26597573 chr12:026597573 0 W/26597573-26597573 FN2731-S SNP G -> A AC=2;AN=200;BQB=0.835897;DP=4264;DP4=1936,1915,27,22;HOB=0.0198;ICB=0.495051;MQ=49;MQ0F=0;MQB=8.70745e-25;MQSB=0.655894;RPB=0.219022;SGB=59.2502;VDB=0.111847;EFF=INTERGENIC(MODIFIER||||||||||1) FN2767-S.SNP.12:26597781 chr12:026597781 0 W/26597781-26597781 FN2767-S SNP A -> T AC=1;AN=198;BQB=0.835453;DP=3769;DP4=1809,1789,4,11;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.000265322;MQB=8.48695e-08;MQSB=0.513955;RPB=0.965711;SGB=63.3342;VDB=0.128791;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.12:26598980 chr12:026598980 0 W/26598980-26598980 FN2465 SNP C -> A AC=1;AN=200;BQB=0.371154;DP=4441;DP4=2008,2156,15,17;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=9.48504e-18;MQSB=0.692612;RPB=0.637925;SGB=105.163;VDB=0.697148;EFF=INTERGENIC(MODIFIER||||||||||1) FN2465.SNP.12:26598981 chr12:026598981 0 W/26598981-26598981 FN2465 SNP T -> A AC=1;AN=200;BQB=0.798757;DP=4449;DP4=1960,2020,14,16;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.6744e-18;MQSB=0.664238;RPB=0.840511;SGB=132.552;VDB=0.483705;EFF=INTERGENIC(MODIFIER||||||||||1) FN864-S.SNP.12:26601621 chr12:026601621 0 W/26601621-26601621 FN864-S Single Base Substitution T-A INTRON HET SNo: 770, Mutant_ID: FN864-S, Generation: M2, Mutations: 66, Genes: 22, Seed availability: Yes. FN3557-S.SNP.12:26602699 chr12:026602699 0 W/26602699-26602699 FN3557-S SNP A -> G AC=2;AN=188;BQB=0.316994;DP=2452;DP4=1196,1144,16,16;HOB=0.0210502;ICB=0.494738;MQ=49;MQ0F=0;MQB=3.25243e-15;MQSB=0.951621;RPB=0.820239;SGB=103.307;VDB=0.98653;EFF=INTRON(MODIFIER||||499|LOC_Os12g42810|protein_coding|CODING|LOC_Os12g42810.1|6|1) FN2438.SNP.12:26604206 chr12:026604206 0 W/26604206-26604206 FN2438 SNP A -> T AC=1;AN=200;BQB=0.660453;DP=4651;DP4=2258,2124,13,5;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000430015;MQB=2.80822e-08;MQSB=0.000736712;RPB=0.306756;SGB=54.6902;VDB=0.267893;EFF=INTRON(MODIFIER||||499|LOC_Os12g42810|protein_coding|CODING|LOC_Os12g42810.1|10|1) W426-1-1.SNP.12:26605320 chr12:026605320 0 W/26605320-26605320 W426-1-1 Single Base Substitution C-T INTERGENIC HOMO SNo: 1411, Mutant_ID: W426-1-1, Generation: M2, Mutations: 61, Genes: 38, Seed availability: Yes. W450-6-1.SNP.12:26605487 chr12:026605487 0 W/26605487-26605487 W450-6-1 Single Base Substitution A-G INTERGENIC HOMO SNo: 1414, Mutant_ID: W450-6-1, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-235.SNP.12:26606627 chr12:026606627 0 W/26606627-26606627 FN-235 Single Base Substitution A-G INTERGENIC HET SNo: 234, Mutant_ID: FN-235, Generation: M2, Mutations: 76, Genes: 5, Seed availability: Yes. FN4172-S.SNP.12:26608146 chr12:026608146 0 W/26608146-26608146 FN4172-S SNP A -> T AC=1;AN=170;BQB=0.959377;DP=2188;DP4=1244,878,6,3;HOB=6.92042e-05;ICB=0.000139222;MQ=49;MQ0F=0;MQB=0.000135933;MQSB=0.141002;RPB=0.998267;SGB=34.5445;VDB=0.782803;EFF=INTERGENIC(MODIFIER||||||||||1) FN2758-S.SNP.12:26609523 chr12:026609523 0 W/26609523-26609523 FN2758-S SNP T -> G AC=1;AN=200;BQB=0.697655;DP=4787;DP4=2209,1867,13,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=5.11986e-09;MQSB=0.151699;RPB=0.970814;SGB=-10.0844;VDB=0.398801;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gTc/gGc|V11G|417|LOC_Os12g42820|protein_coding|CODING|LOC_Os12g42820.1|1|1) FN1115-S.SNP.12:26611983 chr12:026611983 0 W/26611983-26611983 FN1115-S Single Base Substitution G-A INTERGENIC HET SNo: 987, Mutant_ID: FN1115-S, Generation: M2, Mutations: 65, Genes: 11, Seed availability: Yes. FN1277-S.SNP.12:26628226 chr12:026628226 0 W/26628226-26628226 FN1277-S Single Base Substitution G-A INTERGENIC HET SNo: 1091, Mutant_ID: FN1277-S, Generation: M2, Mutations: 73, Genes: 12, Seed availability: Yes. FN-144.SNP.12:26628309 chr12:026628309 0 W/26628309-26628309 FN-144 Single Base Substitution G-A INTERGENIC HOMO SNo: 144, Mutant_ID: FN-144, Generation: M2, Mutations: 66, Genes: 9, Seed availability: Yes. FN1435-S.SNP.12:26638754 chr12:026638754 0 W/26638754-26638754 FN1435-S Single Base Substitution A-G INTRON HOMO SNo: 1207, Mutant_ID: FN1435-S, Generation: M2, Mutations: 76, Genes: 23, Seed availability: No. FN743-S.SNP.12:26640506 chr12:026640506 0 W/26640506-26640506 FN743-S Single Base Substitution C-A SYNONYMOUS_CODING HET SNo: 667, Mutant_ID: FN743-S, Generation: M2, Mutations: 53, Genes: 79, Seed availability: Yes. FN3581-S.SNP.12:26649557 chr12:026649557 0 W/26649557-26649557 FN3581-S SNP G -> A AC=1;AN=190;BQB=0.950326;DP=3194;DP4=1278,1805,7,3;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.38902e-07;MQSB=0.960211;RPB=0.119593;SGB=39.9877;VDB=0.176079;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gGc/gAc|G490D|766|LOC_Os12g42876|protein_coding|CODING|LOC_Os12g42876.1|9|1) FN1375-S.SNP.12:26658657 chr12:026658657 0 W/26658657-26658657 FN1375-S Single Base Substitution A-G NON_SYNONYMOUS_CODING HET LOC_Os12g42884 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed SNo: 1163, Mutant_ID: FN1375-S, Generation: M2, Mutations: 89, Genes: 39, Seed availability: Yes. FN4104-S.SNP.12:26668865 chr12:026668865 0 W/26668865-26668865 FN4104-S SNP T -> A AC=1;AN=182;BQB=0.497136;DP=3241;DP4=1362,1728,5,6;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.85289e-06;MQSB=0.717412;RPB=0.301998;SGB=13.1007;VDB=0.67865;EFF=INTERGENIC(MODIFIER||||||||||1) FN4104-S.SNP.12:26668866 chr12:026668866 0 W/26668866-26668866 FN4104-S SNP C -> T AC=1;AN=182;BQB=0.745041;DP=3253;DP4=1348,1771,6,5;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=2.71549e-06;MQSB=0.80851;RPB=0.336477;SGB=13.1007;VDB=0.706816;EFF=INTERGENIC(MODIFIER||||||||||1) FN1214-S.SNP.12:26672745 chr12:026672745 0 W/26672745-26672745 FN1214-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1043, Mutant_ID: FN1214-S, Generation: M2, Mutations: 71, Genes: 26, Seed availability: Yes. FN2329.SNP.12:26690034 chr12:026690034 0 W/26690034-26690034 FN2329 SNP G -> C AC=1;AN=192;BQB=0.95091;DP=5005;DP4=2226,2512,8,5;HOB=5.42535e-05;ICB=0.000109072;MQ=49;MQ0F=0;MQB=3.13674e-07;MQSB=0.989147;RPB=0.900927;SGB=36.2157;VDB=0.949542;EFF=INTERGENIC(MODIFIER||||||||||1) FN2591-S.SNP.12:26702275 chr12:026702275 0 W/26702275-26702275 FN2591-S SNP A -> T AC=1;AN=198;BQB=0.657595;DP=3996;DP4=1901,1896,8,4;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0.00025025;MQB=1.24749e-06;MQSB=0.86305;RPB=0.953054;SGB=-16.8114;VDB=0.769043;EFF=INTRON(MODIFIER||||408|LOC_Os12g42980|protein_coding|CODING|LOC_Os12g42980.1|4|1),INTRON(MODIFIER||||316|LOC_Os12g42980|protein_coding|CODING|LOC_Os12g42980.2|4|1) FN-274.SNP.12:26718513 chr12:026718513 0 W/26718513-26718513 FN-274 Single Base Substitution A-G INTERGENIC HET SNo: 271, Mutant_ID: FN-274, Generation: M2, Mutations: 70, Genes: 22, Seed availability: Yes. FN4185-S.SNP.12:26720704 chr12:026720704 0 W/26720704-26720704 FN4185-S SNP C -> T AC=2;AN=170;BQB=0.80997;DP=2782;DP4=1243,1438,12,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=9.11727e-16;MQSB=0.996654;RPB=0.278904;SGB=89.9604;VDB=0.635234;EFF=INTERGENIC(MODIFIER||||||||||1) FN2630-S.SNP.12:26722973 chr12:026722973 0 W/26722973-26722973 FN2630-S SNP A -> T AC=1;AN=200;BQB=0.461529;DP=5401;DP4=2622,2515,17,16;HOB=5e-05;ICB=0.0001005;MQ=44;MQ0F=0.0374005;MQB=4.88526e-07;MQSB=6.79351e-29;RPB=0.889381;SGB=71.1676;VDB=0.823335;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Acc/Tcc|T354S|1767|LOC_Os12g43020|protein_coding|CODING|LOC_Os12g43020.1|2|1) FN4109-S.SNP.12:26723112 chr12:026723112 0 W/26723112-26723112 FN4109-S SNP C -> T AC=1;AN=182;BQB=0.98281;DP=3993;DP4=2153,1774,8,4;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0358127;MQB=0.428499;MQSB=0.0846834;RPB=0.226935;SGB=48.6223;VDB=0.173134;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cCg/cTg|P400L|1767|LOC_Os12g43020|protein_coding|CODING|LOC_Os12g43020.1|2|1) FN355-S.SNP.12:26727816 chr12:026727816 0 W/26727816-26727816 FN355-S Single Base Substitution C-T INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN447-S.SNP.12:26728066 chr12:026728066 0 W/26728066-26728066 FN447-S Single Base Substitution C-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN3514-S.SNP.12:26728214 chr12:026728214 0 W/26728214-26728214 FN3514-S SNP C -> T AC=1;AN=188;BQB=0.989286;DP=3291;DP4=1745,1440,2,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0.000303859;MQB=0.177237;MQSB=0.965703;RPB=0.919596;SGB=25.3545;VDB=0.935066;EFF=INTERGENIC(MODIFIER||||||||||1) FN771-S.SNP.12:26729996 chr12:026729996 0 W/26729996-26729996 FN771-S Single Base Substitution A-G INTRON HOMO SNo: 692, Mutant_ID: FN771-S, Generation: M2, Mutations: 61, Genes: 35, Seed availability: Yes. FN1150-S.SNP.12:26730092 chr12:026730092 0 W/26730092-26730092 FN1150-S Single Base Substitution T-C NON_SYNONYMOUS_CODING HET LOC_Os12g43034 retrotransposon protein, putative, unclassified, expressed SNo: 1006, Mutant_ID: FN1150-S, Generation: M2, Mutations: 45, Genes: 10, Seed availability: Yes. FN2136-S.SNP.12:26734450 chr12:026734450 0 W/26734450-26734450 FN2136-S SNP C -> T AC=1;AN=168;BQB=0.98747;DP=2476;DP4=843,1578,4,12;HOB=7.08617e-05;ICB=0.000142567;MQ=48;MQ0F=0;MQB=5.29945e-08;MQSB=0.498835;RPB=0.0721039;SGB=4.1907;VDB=0.435229;EFF=INTERGENIC(MODIFIER||||||||||1) FN1251-S.SNP.12:26736800 chr12:026736800 0 W/26736800-26736800 FN1251-S Single Base Substitution C-T SYNONYMOUS_CODING HET SNo: 1069, Mutant_ID: FN1251-S, Generation: M2, Mutations: 66, Genes: 127, Seed availability: Yes. FN3322-S.SNP.12:26751575 chr12:026751575 0 W/26751575-26751575 FN3322-S SNP G -> A AC=1;AN=184;BQB=0.487394;DP=2847;DP4=1348,1368,8,4;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=0.000114329;MQSB=0.99642;RPB=0.438774;SGB=15.7097;VDB=0.0969851;EFF=INTERGENIC(MODIFIER||||||||||1) FN4047-S.SNP.12:26751974 chr12:026751974 0 W/26751974-26751974 FN4047-S SNP G -> A AC=2;AN=168;BQB=0.952794;DP=3024;DP4=1603,1230,12,14;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0.000330688;MQB=3.0298e-15;MQSB=0.984669;RPB=0.876266;SGB=79.3486;VDB=0.545809;EFF=INTERGENIC(MODIFIER||||||||||1) FN1641-S.SNP.12:26753844 chr12:026753844 0 W/26753844-26753844 FN1641-S Single Base Substitution A-C INTRON HET SNo: 1346, Mutant_ID: FN1641-S, Generation: M2, Mutations: 65, Genes: 24, Seed availability: Yes. FN3851-S.SNP.12:26775070 chr12:026775070 0 W/26775070-26775070 FN3851-S SNP T -> G AC=1;AN=158;BQB=0.990089;DP=2660;DP4=1416,1128,9,7;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=2.53792e-10;MQSB=0.999741;RPB=0.13508;SGB=44.1818;VDB=0.333474;EFF=INTRON(MODIFIER||||916|LOC_Os12g43120|protein_coding|CODING|LOC_Os12g43120.1|9|1),INTRON(MODIFIER||||783|LOC_Os12g43120|protein_coding|CODING|LOC_Os12g43120.2|10|1) FN-165.SNP.12:26788634 chr12:026788634 0 W/26788634-26788634 FN-165 Single Base Substitution G-A INTERGENIC HET SNo: 165, Mutant_ID: FN-165, Generation: M2, Mutations: 41, Genes: 7, Seed availability: Yes. FN-344.SNP.12:26789902 chr12:026789902 0 W/26789902-26789902 FN-344 Single Base Substitution G-T INTERGENIC HET SNo: 335, Mutant_ID: FN-344, Generation: M2, Mutations: 117, Genes: 26, Seed availability: Yes. FN2403.SNP.12:26790647 chr12:026790647 0 W/26790647-26790647 FN2403 SNP C -> A AC=1;AN=200;BQB=0.961148;DP=5055;DP4=2612,2134,13,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=2.34654e-15;MQSB=0.987863;RPB=0.690155;SGB=19.1209;VDB=0.69615;EFF=INTERGENIC(MODIFIER||||||||||1) FN4075-S.SNP.12:26792548 chr12:026792548 0 W/26792548-26792548 FN4075-S SNP T -> C AC=1;AN=182;BQB=0.622508;DP=2638;DP4=1190,1388,1,8;HOB=6.03792e-05;ICB=0.000121422;MQ=49;MQ0F=0;MQB=4.25733e-05;MQSB=0.996762;RPB=0.997048;SGB=35.0899;VDB=0.717818;EFF=INTERGENIC(MODIFIER||||||||||1) FN4140-S.SNP.12:26792571 chr12:026792571 0 W/26792571-26792571 FN4140-S SNP G -> T AC=2;AN=170;BQB=0.999086;DP=2197;DP4=965,1164,10,17;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=6.16141e-17;MQSB=0.927655;RPB=0.929902;SGB=51.6384;VDB=0.520108;EFF=INTERGENIC(MODIFIER||||||||||1) FN1545-S.SNP.12:26795868 chr12:026795868 0 W/26795868-26795868 FN1545-S Single Base Substitution G-T INTRON HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN874-S.SNP.12:26806536 chr12:026806536 0 W/26806536-26806536 FN874-S Single Base Substitution C-G UTR_5_PRIME HET SNo: 780, Mutant_ID: FN874-S, Generation: M2, Mutations: 71, Genes: 61, Seed availability: Yes. FN-125.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN-125 Single Base Substitution A-G INTERGENIC HET SNo: 125, Mutant_ID: FN-125, Generation: M2, Mutations: 55, Genes: 10, Seed availability: Yes. FN-14.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN-14 Single Base Substitution A-G INTERGENIC HET SNo: 14, Mutant_ID: FN-14, Generation: M2, Mutations: 38, Genes: 15, Seed availability: Yes. FN1182-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1182-S Single Base Substitution A-G START_GAINED HET LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1021, Mutant_ID: FN1182-S, Generation: M2, Mutations: 86, Genes: 20, Seed availability: Yes. FN1346-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1346-S Single Base Substitution A-G START_GAINED HOMO LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1144, Mutant_ID: FN1346-S, Generation: M2, Mutations: 101, Genes: 27, Seed availability: Yes. FN1381-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1381-S Single Base Substitution A-G START_GAINED HOMO LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1167, Mutant_ID: FN1381-S, Generation: M2, Mutations: 44, Genes: 6, Seed availability: No. FN1467-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1467-S Single Base Substitution A-G START_GAINED HOMO LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1235, Mutant_ID: FN1467-S, Generation: M2, Mutations: 76, Genes: 28, Seed availability: Yes. FN1519-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1519-S Single Base Substitution A-G START_GAINED Homo LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 1271, Mutant_ID: FN1519-S, Generation: M2, Mutations: 100, Genes: 41, Seed availability: Yes. FN1712-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN1712-S SNP A -> G AC=1;AN=188;BQB=0.22733;DP=3210;DP4=1207,1946,11,20;HOB=5.65867e-05;ICB=0.000113775;MQ=34;MQ0F=0.197508;MQB=0.868152;MQSB=0;RPB=0.999326;SGB=-6.85034;VDB=0.373759;EFF=START_GAINED(LOW||||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1),UTR_5_PRIME(MODIFIER||1171||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1) FN2617-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN2617-S SNP A -> G AC=2;AN=198;BQB=0.859189;DP=4196;DP4=1682,2197,23,16;HOB=0.019998;ICB=0.495001;MQ=44;MQ0F=0.0245472;MQB=3.96108e-05;MQSB=3.7533e-16;RPB=0.984074;SGB=86.437;VDB=0.94018;EFF=START_GAINED(LOW||||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1),UTR_5_PRIME(MODIFIER||1171||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1) FN3829-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN3829-S SNP A -> G AC=1;AN=190;BQB=0.972404;DP=3260;DP4=1672,1427,13,6;HOB=5.54017e-05;ICB=0.000111386;MQ=42;MQ0F=0.0322086;MQB=0.0268612;MQSB=2.71443e-34;RPB=0.786049;SGB=57.4238;VDB=0.177652;EFF=START_GAINED(LOW||||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1),UTR_5_PRIME(MODIFIER||1171||103|LOC_Os12g43165|protein_coding|CODING|LOC_Os12g43165.1|1|1) FN558-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN558-S Single Base Substitution A-G START_GAINED HOMO LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 551, Mutant_ID: FN558-S, Generation: M2, Mutations: 52, Genes: 11, Seed availability: Yes. FN700-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN700-S Single Base Substitution A-G START_GAINED HET LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 629, Mutant_ID: FN700-S, Generation: M2, Mutations: 58, Genes: 33, Seed availability: Yes. FN869-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN869-S Single Base Substitution A-G INTERGENIC HOMO SNo: 775, Mutant_ID: FN869-S, Generation: M2, Mutations: 74, Genes: 14, Seed availability: Yes. FN979-S.SNP.12:26806715 chr12:026806715 0 W/26806715-26806715 FN979-S Single Base Substitution A-G START_GAINED HET LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed SNo: 883, Mutant_ID: FN979-S, Generation: M2, Mutations: 42, Genes: 19, Seed availability: Yes. FN2563-S.SNP.12:26809832 chr12:026809832 0 W/26809832-26809832 FN2563-S SNP G -> A AC=1;AN=198;BQB=0.661071;DP=3089;DP4=1367,1396,5,4;HOB=5.10152e-05;ICB=0.000102546;MQ=47;MQ0F=0.00388475;MQB=0.00108461;MQSB=0.176502;RPB=0.237029;SGB=-5.00654;VDB=0.527088;EFF=INTERGENIC(MODIFIER||||||||||1) FN2268-S.SNP.12:26811094 chr12:026811094 0 W/26811094-26811094 FN2268-S SNP G -> T AC=1;AN=190;BQB=0.737914;DP=2739;DP4=1534,1011,11,3;HOB=5.54017e-05;ICB=0.000111386;MQ=44;MQ0F=0.00255568;MQB=0.00986436;MQSB=0.000277469;RPB=0.666498;SGB=39.6545;VDB=0.936957;EFF=INTERGENIC(MODIFIER||||||||||1) FN3692-S.SNP.12:26818714 chr12:026818714 0 W/26818714-26818714 FN3692-S SNP C -> T AC=1;AN=190;BQB=0.866474;DP=2718;DP4=1254,1345,9,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0.00110375;MQB=1.66303e-08;MQSB=0.939661;RPB=0.999898;SGB=46.7622;VDB=0.42633;EFF=INTERGENIC(MODIFIER||||||||||1) FN3762-S.SNP.12:26822941 chr12:026822941 0 W/26822941-26822941 FN3762-S SNP T -> G AC=2;AN=190;BQB=0.977927;DP=2766;DP4=1469,1101,14,8;HOB=0.020831;ICB=0.494793;MQ=45;MQ0F=0.00180766;MQB=0.00631292;MQSB=2.72488e-33;RPB=0.994261;SGB=68.0854;VDB=0.799735;EFF=INTRON(MODIFIER||||317|LOC_Os12g43220|protein_coding|CODING|LOC_Os12g43220.1|10|1) FN2320.SNP.12:26824454 chr12:026824454 0 W/26824454-26824454 FN2320 SNP C -> T AC=1;AN=192;BQB=0.740719;DP=3719;DP4=1817,1437,9,8;HOB=5.42535e-05;ICB=0.000109072;MQ=45;MQ0F=0.00645335;MQB=0.000217983;MQSB=0.00195982;RPB=0.594231;SGB=50.4731;VDB=0.466024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Gtg/Atg|V228M|317|LOC_Os12g43220|protein_coding|CODING|LOC_Os12g43220.1|8|1) FN548-S.SNP.12:26825818 chr12:026825818 0 W/26825818-26825818 FN548-S Single Base Substitution A-T INTRON HET SNo: 543, Mutant_ID: FN548-S, Generation: M2, Mutations: 75, Genes: 36, Seed availability: Yes. FN2496.SNP.12:26826081 chr12:026826081 0 W/26826081-26826081 FN2496 SNP A -> C AC=2;AN=200;BQB=0.86817;DP=2805;DP4=1248,1259,10,18;HOB=0.0198;ICB=0.495051;MQ=48;MQ0F=0.000356506;MQB=1.87881e-12;MQSB=0.319712;RPB=0.998303;SGB=25.5416;VDB=0.902302;EFF=INTRON(MODIFIER||||317|LOC_Os12g43220|protein_coding|CODING|LOC_Os12g43220.1|3|1) W138-2-1.SNP.12:26828711 chr12:026828711 0 W/26828711-26828711 W138-2-1 Single Base Substitution C-T INTRON HOMO SNo: 1396, Mutant_ID: W138-2-1, Generation: M2, Mutations: 73, Genes: 18, Seed availability: Yes. FN3105-S.SNP.12:26835019 chr12:026835019 0 W/26835019-26835019 FN3105-S SNP G -> T AC=2;AN=184;BQB=0.982864;DP=2896;DP4=1283,1528,11,15;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00103591;MQB=3.82242e-12;MQSB=0.501517;RPB=0.860159;SGB=112.047;VDB=0.469024;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P293T|1307|LOC_Os12g43230|protein_coding|CODING|LOC_Os12g43230.1|2|1) FN3481-S.SNP.12:26835019 chr12:026835019 0 W/26835019-26835019 FN3481-S SNP G -> T AC=2;AN=184;BQB=0.972466;DP=2786;DP4=1259,1435,21,13;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0.00143575;MQB=1.61441e-17;MQSB=0.427511;RPB=0.501903;SGB=148.222;VDB=0.449644;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P293T|1307|LOC_Os12g43230|protein_coding|CODING|LOC_Os12g43230.1|2|1) FN3992-S.SNP.12:26835019 chr12:026835019 0 W/26835019-26835019 FN3992-S SNP G -> T AC=1;AN=168;BQB=0.857853;DP=2546;DP4=1066,1402,6,7;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0.00274941;MQB=2.3237e-05;MQSB=0.582442;RPB=0.084225;SGB=52.1728;VDB=0.0273298;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cca/Aca|P293T|1307|LOC_Os12g43230|protein_coding|CODING|LOC_Os12g43230.1|2|1) FN3339-S.SNP.12:26835069 chr12:026835069 0 W/26835069-26835069 FN3339-S SNP G -> C AC=2;AN=184;BQB=0.952929;DP=2886;DP4=1185,1612,9,12;HOB=0.0215028;ICB=0.494625;MQ=47;MQ0F=0.012474;MQB=2.32009e-08;MQSB=0.0367734;RPB=0.771297;SGB=89.4385;VDB=0.103534;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|gCc/gGc|A276G|1307|LOC_Os12g43230|protein_coding|CODING|LOC_Os12g43230.1|2|1) FN483-S.SNP.12:26839060 chr12:026839060 0 W/26839060-26839060 FN483-S Single Base Substitution A-T INTERGENIC HOMO SNo: 481, Mutant_ID: FN483-S, Generation: M2, Mutations: 86, Genes: 37, Seed availability: Yes. FN1514-S.SNP.12:26846070 chr12:026846070 0 W/26846070-26846070 FN1514-S Single Base Substitution G-C INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN461-S.SNP.12:26848873 chr12:026848873 0 W/26848873-26848873 FN461-S Single Base Substitution G-A INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN3943-S.SNP.12:26855887 chr12:026855887 0 W/26855887-26855887 FN3943-S SNP C -> G AC=2;AN=168;BQB=0.641727;DP=1474;DP4=807,543,9,7;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=2.52954e-07;MQSB=0.993869;RPB=0.93546;SGB=45.0404;VDB=0.998604;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.12:26856863 chr12:026856863 0 W/26856863-26856863 FN3823-S SNP C -> A AC=1;AN=190;BQB=0.994487;DP=3016;DP4=1581,1311,13,7;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0.00165782;MQB=7.50839e-11;MQSB=1.40844e-11;RPB=0.932722;SGB=11.8805;VDB=0.604286;EFF=INTERGENIC(MODIFIER||||||||||1) FN2201-S.SNP.12:26860860 chr12:026860860 0 W/26860860-26860860 FN2201-S SNP C -> T AC=2;AN=190;BQB=0.963462;DP=4606;DP4=2363,1984,21,22;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0.000217108;MQB=1.2034e-22;MQSB=0.999947;RPB=0.969804;SGB=142.717;VDB=0.2963;EFF=SYNONYMOUS_CODING(LOW|SILENT|acC/acT|T868|2003|LOC_Os12g43270|protein_coding|CODING|LOC_Os12g43270.1|4|1) FN1278-S.SNP.12:26875728 chr12:026875728 0 W/26875728-26875728 FN1278-S Single Base Substitution T-C INTRON HOMO SNo: 1092, Mutant_ID: FN1278-S, Generation: M2, Mutations: 94, Genes: 37, Seed availability: Yes. FN3446-S.SNP.12:26879349 chr12:026879349 0 W/26879349-26879349 FN3446-S SNP C -> A AC=1;AN=184;BQB=0.991558;DP=2514;DP4=1296,1143,7,6;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.48122e-08;MQSB=0.992273;RPB=0.488943;SGB=18.2315;VDB=0.540608;EFF=INTERGENIC(MODIFIER||||||||||1) FN-257.SNP.12:26900489 chr12:026900489 0 W/26900489-26900489 FN-257 Single Base Substitution C-T INTERGENIC HOMO SNo: 256, Mutant_ID: FN-257, Generation: M2, Mutations: 63, Genes: 169, Seed availability: Yes. FN2411.SNP.12:26901771 chr12:026901771 0 W/26901771-26901771 FN2411 SNP C -> A AC=1;AN=200;BQB=0.702565;DP=4457;DP4=2093,2133,8,8;HOB=5e-05;ICB=0.0001005;MQ=47;MQ0F=0;MQB=2.06398e-06;MQSB=0.601856;RPB=0.272414;SGB=68.0801;VDB=0.0364192;EFF=INTERGENIC(MODIFIER||||||||||1) FN701-S.SNP.12:26910928 chr12:026910928 0 W/26910928-26910928 FN701-S Single Base Substitution G-A INTERGENIC HET SNo: 630, Mutant_ID: FN701-S, Generation: M2, Mutations: 73, Genes: 44, Seed availability: Yes. FN1302-S.SNP.12:26960265 chr12:026960265 0 W/26960265-26960265 FN1302-S Single Base Substitution A-T INTERGENIC HET SNo: 1111, Mutant_ID: FN1302-S, Generation: M2, Mutations: 77, Genes: 74, Seed availability: Yes. FN1085-S.SNP.12:26966844 chr12:026966844 0 W/26966844-26966844 FN1085-S Single Base Substitution C-T INTERGENIC HOMO SNo: 968, Mutant_ID: FN1085-S, Generation: M2, Mutations: 69, Genes: 20, Seed availability: Yes. FN4070-S.SNP.12:26975911 chr12:026975911 0 W/26975911-26975911 FN4070-S SNP C -> T AC=2;AN=182;BQB=0.757912;DP=1880;DP4=938,871,13,20;HOB=0.0217365;ICB=0.494567;MQ=18;MQ0F=0.270213;MQB=0.993132;MQSB=0;RPB=0.608924;SGB=138.115;VDB=0.326486;EFF=INTRON(MODIFIER||||1073|LOC_Os12g43480|protein_coding|CODING|LOC_Os12g43480.1|3|1) FN4070-S.SNP.12:26975912 chr12:026975912 0 W/26975912-26975912 FN4070-S SNP T -> C AC=2;AN=182;BQB=0.89531;DP=1876;DP4=950,853,13,22;HOB=0.0217365;ICB=0.494567;MQ=18;MQ0F=0.271322;MQB=0.999093;MQSB=0;RPB=0.679171;SGB=125.218;VDB=0.315577;EFF=INTRON(MODIFIER||||1073|LOC_Os12g43480|protein_coding|CODING|LOC_Os12g43480.1|3|1) FN-277.SNP.12:26986387 chr12:026986387 0 W/26986387-26986387 FN-277 Single Base Substitution G-A INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN1256-S.SNP.12:27023375 chr12:027023375 0 W/27023375-27023375 FN1256-S Single Base Substitution C-T INTRON HOMO SNo: 1073, Mutant_ID: FN1256-S, Generation: M2, Mutations: 59, Genes: 92, Seed availability: Yes. FN461-S.SNP.12:27064636 chr12:027064636 0 W/27064636-27064636 FN461-S Single Base Substitution A-G INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN461-S.SNP.12:27064637 chr12:027064637 0 W/27064637-27064637 FN461-S Single Base Substitution G-T INTERGENIC HET SNo: 460, Mutant_ID: FN461-S, Generation: M2, Mutations: 75, Genes: 40, Seed availability: Yes. FN-111.SNP.12:27067453 chr12:027067453 0 W/27067453-27067453 FN-111 Single Base Substitution C-T INTERGENIC HOMO SNo: 111, Mutant_ID: FN-111, Generation: M2, Mutations: 43, Genes: 7, Seed availability: Yes. FN514-S.SNP.12:27127261 chr12:027127261 0 W/27127261-27127261 FN514-S Single Base Substitution G-A INTERGENIC HET SNo: 512, Mutant_ID: FN514-S, Generation: M2, Mutations: 52, Genes: 18, Seed availability: Yes. FN1288-S.SNP.12:27127429 chr12:027127429 0 W/27127429-27127429 FN1288-S Single Base Substitution G-A INTERGENIC HOMO SNo: 1102, Mutant_ID: FN1288-S, Generation: M2, Mutations: 75, Genes: 22, Seed availability: Yes. FN4011-S.SNP.12:27139308 chr12:027139308 0 W/27139308-27139308 FN4011-S SNP C -> T AC=1;AN=168;BQB=0.990485;DP=3218;DP4=1785,1312,15,7;HOB=7.08617e-05;ICB=0.000142567;MQ=40;MQ0F=0.0254817;MQB=0.240262;MQSB=2.49086e-07;RPB=0.943191;SGB=92.0501;VDB=0.275751;EFF=INTERGENIC(MODIFIER||||||||||1) FN2441.SNP.12:27139688 chr12:027139688 0 W/27139688-27139688 FN2441 SNP G -> A AC=1;AN=200;BQB=0.914166;DP=4204;DP4=2124,1825,14,10;HOB=5e-05;ICB=0.0001005;MQ=41;MQ0F=0.00475737;MQB=0.0086669;MQSB=0;RPB=0.661791;SGB=104.921;VDB=0.828194;EFF=INTERGENIC(MODIFIER||||||||||1) FN3987-S.SNP.12:27140619 chr12:027140619 0 W/27140619-27140619 FN3987-S SNP G -> A AC=1;AN=168;BQB=0.928235;DP=1910;DP4=924,887,9,8;HOB=7.08617e-05;ICB=0.000142567;MQ=30;MQ0F=0.160733;MQB=0.31602;MQSB=0;RPB=0.677924;SGB=48.4712;VDB=0.762154;EFF=INTERGENIC(MODIFIER||||||||||1) FN1563-S.SNP.12:27143135 chr12:027143135 0 W/27143135-27143135 FN1563-S Single Base Substitution C-T INTERGENIC HET SNo: 1305, Mutant_ID: FN1563-S, Generation: M2, Mutations: 76, Genes: 35, Seed availability: Yes. FN3567-S.SNP.12:27144596 chr12:027144596 0 W/27144596-27144596 FN3567-S SNP G -> A AC=1;AN=188;BQB=0.264429;DP=2389;DP4=1331,951,8,6;HOB=5.65867e-05;ICB=0.000113775;MQ=48;MQ0F=0;MQB=0.000143859;MQSB=6.81071e-08;RPB=0.163789;SGB=39.5276;VDB=0.746499;EFF=INTERGENIC(MODIFIER||||||||||1) FN239-S.SNP.12:27144775 chr12:027144775 0 W/27144775-27144775 FN239-S Single Base Substitution A-C INTERGENIC HET SNo: 238, Mutant_ID: FN239-S, Generation: M2, Mutations: 54, Genes: 6, Seed availability: Yes. FN2579-S.SNP.12:27148979 chr12:027148979 0 W/27148979-27148979 FN2579-S SNP G -> A AC=1;AN=198;BQB=0.896097;DP=4211;DP4=2191,1807,7,10;HOB=5.10152e-05;ICB=0.000102546;MQ=45;MQ0F=0;MQB=3.41832e-07;MQSB=0.955725;RPB=0.156123;SGB=29.3443;VDB=0.414619;EFF=INTERGENIC(MODIFIER||||||||||1) FN2656-S.SNP.12:27161448 chr12:027161448 0 W/27161448-27161448 FN2656-S SNP A -> G AC=1;AN=200;BQB=0.694991;DP=4595;DP4=2229,2176,11,12;HOB=5e-05;ICB=0.0001005;MQ=48;MQ0F=0.000217628;MQB=1.37052e-10;MQSB=0.000659297;RPB=0.986862;SGB=100.316;VDB=0.250316;EFF=INTERGENIC(MODIFIER||||||||||1) FN1262-S.SNP.12:27162429 chr12:027162429 0 W/27162429-27162429 FN1262-S Single Base Substitution T-A INTERGENIC HOMO SNo: 1077, Mutant_ID: FN1262-S, Generation: M2, Mutations: 68, Genes: 145, Seed availability: Yes. FN2574-S.SNP.12:27162429 chr12:027162429 0 W/27162429-27162429 FN2574-S SNP T -> A AC=2;AN=198;BQB=0.91416;DP=3557;DP4=1649,1385,5,8;HOB=0.019998;ICB=0.495001;MQ=46;MQ0F=0.000281136;MQB=0.000224523;MQSB=0.00487123;RPB=0.537486;SGB=54.144;VDB=0.085717;EFF=INTERGENIC(MODIFIER||||||||||1) FN2740-S.SNP.12:27162429 chr12:027162429 0 W/27162429-27162429 FN2740-S SNP T -> A AC=2;AN=200;BQB=0.676083;DP=4354;DP4=2154,1529,15,14;HOB=0.0198;ICB=0.495051;MQ=46;MQ0F=0;MQB=1.4785e-10;MQSB=0.0150947;RPB=0.435777;SGB=60.747;VDB=0.0685723;EFF=INTERGENIC(MODIFIER||||||||||1) FN3823-S.SNP.12:27162429 chr12:027162429 0 W/27162429-27162429 FN3823-S SNP T -> A AC=1;AN=190;BQB=0.0422025;DP=2485;DP4=1225,818,4,11;HOB=5.54017e-05;ICB=0.000111386;MQ=45;MQ0F=0;MQB=3.29984e-06;MQSB=0.371171;RPB=0.851861;SGB=4.11112;VDB=0.976813;EFF=INTERGENIC(MODIFIER||||||||||1) FN456-S.SNP.12:27166873 chr12:027166873 0 W/27166873-27166873 FN456-S Single Base Substitution G-C UTR_3_PRIME HET SNo: 455, Mutant_ID: FN456-S, Generation: M2, Mutations: 90, Genes: 65, Seed availability: Yes. W279-4-1.SNP.12:27174642 chr12:027174642 0 W/27174642-27174642 W279-4-1 Single Base Substitution G-A INTERGENIC HET SNo: 1404, Mutant_ID: W279-4-1, Generation: M2, Mutations: 49, Genes: 13, Seed availability: No. FN3364-S.SNP.12:27180281 chr12:027180281 0 W/27180281-27180281 FN3364-S SNP C -> T AC=1;AN=184;BQB=0.895513;DP=3213;DP4=1837,1247,9,1;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=1.67695e-06;MQSB=0.873924;RPB=0.976126;SGB=39.699;VDB=0.587338;EFF=INTERGENIC(MODIFIER||||||||||1) FN3316-S.SNP.12:27182052 chr12:027182052 0 W/27182052-27182052 FN3316-S SNP G -> C AC=1;AN=184;BQB=0.977519;DP=3150;DP4=1336,1733,3,4;HOB=5.90737e-05;ICB=0.00011879;MQ=46;MQ0F=0.0015873;MQB=0.0033994;MQSB=0.99999;RPB=0.74643;SGB=26.1347;VDB=0.753018;EFF=INTERGENIC(MODIFIER||||||||||1) FN895-S.SNP.12:27182619 chr12:027182619 0 W/27182619-27182619 FN895-S Single Base Substitution G-A INTERGENIC HET SNo: 801, Mutant_ID: FN895-S, Generation: M2, Mutations: 61, Genes: 6, Seed availability: Yes. FN2620-S.SNP.12:27184917 chr12:027184917 0 W/27184917-27184917 FN2620-S SNP G -> A AC=1;AN=198;BQB=0.40348;DP=4228;DP4=2441,1589,16,10;HOB=5.10152e-05;ICB=0.000102546;MQ=36;MQ0F=0.0823084;MQB=0.47217;MQSB=0;RPB=0.880781;SGB=83.2905;VDB=0.952891;EFF=STOP_GAINED(HIGH|NONSENSE|Cag/Tag|Q206*|268|LOC_Os12g43760|protein_coding|CODING|LOC_Os12g43760.1|2|1);LOF=(LOC_Os12g43760|LOC_Os12g43760|1|1.00);NMD=(LOC_Os12g43760|LOC_Os12g43760|1|1.00) FN-222.SNP.12:27186702 chr12:027186702 0 W/27186702-27186702 FN-222 Single Base Substitution C-T NON_SYNONYMOUS_CODING HET LOC_Os12g43760 transposon protein, putative, unclassified, expressed SNo: 221, Mutant_ID: FN-222, Generation: M2, Mutations: 95, Genes: 17, Seed availability: Yes. FN721-S.SNP.12:27191178 chr12:027191178 0 W/27191178-27191178 FN721-S Single Base Substitution T-C UTR_3_PRIME HOMO SNo: 646, Mutant_ID: FN721-S, Generation: M2, Mutations: 65, Genes: 12, Seed availability: Yes. FN3785-S.SNP.12:27192540 chr12:027192540 0 W/27192540-27192540 FN3785-S SNP C -> T AC=2;AN=190;BQB=0.843559;DP=2898;DP4=1581,1221,6,10;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=2.93063e-09;MQSB=0.972324;RPB=0.999482;SGB=46.7622;VDB=0.942534;EFF=INTERGENIC(MODIFIER||||||||||1) FN-29.SNP.12:27195886 chr12:027195886 0 W/27195886-27195886 FN-29 Single Base Substitution A-G INTERGENIC Homo SNo: 29, Mutant_ID: FN-29, Generation: M2, Mutations: 30, Genes: 29, Seed availability: Yes. FN1514-S.SNP.12:27201087 chr12:027201087 0 W/27201087-27201087 FN1514-S Single Base Substitution G-A INTERGENIC HET SNo: 1267, Mutant_ID: FN1514-S, Generation: M2, Mutations: 131, Genes: 32, Seed availability: Yes. FN2124-S.SNP.12:27202446 chr12:027202446 0 W/27202446-27202446 FN2124-S SNP T -> C AC=1;AN=168;BQB=0.231021;DP=3952;DP4=1844,2066,13,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=1.41349e-09;MQSB=0.989166;RPB=0.131645;SGB=-105.77;VDB=0.136573;EFF=INTERGENIC(MODIFIER||||||||||1) FN-129.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN-129 Single Base Substitution C-A INTERGENIC HET SNo: 129, Mutant_ID: FN-129, Generation: M2, Mutations: 47, Genes: 11, Seed availability: Yes. FN-277.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN-277 Single Base Substitution C-A INTERGENIC HOMO SNo: 274, Mutant_ID: FN-277, Generation: M2, Mutations: 77, Genes: 18, Seed availability: Yes. FN-70.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN-70 Single Base Substitution C-A INTERGENIC HET SNo: 70, Mutant_ID: FN-70, Generation: M2, Mutations: 97, Genes: 17, Seed availability: Yes. FN1216-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN1216-S Single Base Substitution C-A INTERGENIC HET SNo: 1045, Mutant_ID: FN1216-S, Generation: M2, Mutations: 65, Genes: 31, Seed availability: Yes. FN1399-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN1399-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1178, Mutant_ID: FN1399-S, Generation: M2, Mutations: 67, Genes: 31, Seed availability: Yes. FN1545-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN1545-S Single Base Substitution C-A INTERGENIC HET SNo: 1292, Mutant_ID: FN1545-S, Generation: M2, Mutations: 100, Genes: 550, Seed availability: Yes. FN2183-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN2183-S SNP C -> A AC=1;AN=190;BQB=0.408653;DP=5081;DP4=2673,2032,21,23;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=1.41547e-17;MQSB=0.792692;RPB=0.704672;SGB=-96.4723;VDB=0.749802;EFF=INTERGENIC(MODIFIER||||||||||1) FN2324.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN2324 SNP C -> A AC=2;AN=192;BQB=0.710874;DP=5052;DP4=2626,2067,28,22;HOB=0.0206163;ICB=0.494846;MQ=46;MQ0F=0;MQB=8.97589e-23;MQSB=0.993992;RPB=0.602025;SGB=-50.14;VDB=0.42952;EFF=INTERGENIC(MODIFIER||||||||||1) FN2473.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN2473 SNP C -> A AC=1;AN=200;BQB=0.375877;DP=5032;DP4=2704,2033,14,5;HOB=5e-05;ICB=0.0001005;MQ=46;MQ0F=0;MQB=2.23052e-11;MQSB=0.955519;RPB=0.839895;SGB=81.8956;VDB=0.795248;EFF=INTERGENIC(MODIFIER||||||||||1) FN3569-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN3569-S SNP C -> A AC=1;AN=188;BQB=0.997581;DP=2927;DP4=1509,1352,12,8;HOB=5.65867e-05;ICB=0.000113775;MQ=46;MQ0F=0;MQB=9.13571e-11;MQSB=0.789209;RPB=0.451724;SGB=85.3253;VDB=0.273577;EFF=INTERGENIC(MODIFIER||||||||||1) FN3627-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN3627-S SNP C -> A AC=1;AN=190;BQB=0.828069;DP=3017;DP4=1551,1367,8,6;HOB=5.54017e-05;ICB=0.000111386;MQ=46;MQ0F=0;MQB=4.3211e-07;MQSB=0.406424;RPB=0.818073;SGB=39.6545;VDB=0.543455;EFF=INTERGENIC(MODIFIER||||||||||1) FN3923-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN3923-S SNP C -> A AC=1;AN=158;BQB=0.973246;DP=2586;DP4=1347,1148,3,4;HOB=8.01154e-05;ICB=0.000161245;MQ=46;MQ0F=0;MQB=4.53148e-05;MQSB=0.135562;RPB=0.975457;SGB=25.2211;VDB=0.339906;EFF=INTERGENIC(MODIFIER||||||||||1) FN4247-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN4247-S SNP C -> A AC=1;AN=170;BQB=0.714423;DP=2742;DP4=1463,1210,9,2;HOB=6.92042e-05;ICB=0.000139222;MQ=46;MQ0F=0;MQB=2.46213e-05;MQSB=0.736044;RPB=0.999684;SGB=43.4296;VDB=0.440607;EFF=INTERGENIC(MODIFIER||||||||||1) FN561-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN561-S Single Base Substitution C-A INTERGENIC HOMO SNo: 554, Mutant_ID: FN561-S, Generation: M2, Mutations: 67, Genes: 15, Seed availability: Yes. FN619-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN619-S Single Base Substitution C-A INTERGENIC HOMO SNo: 584, Mutant_ID: FN619-S, Generation: M2, Mutations: 53, Genes: 23, Seed availability: Yes. FN796-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN796-S Single Base Substitution C-A INTERGENIC HET SNo: 716, Mutant_ID: FN796-S, Generation: M2, Mutations: 56, Genes: 39, Seed availability: Yes. FN960-S.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN960-S Single Base Substitution C-A INTERGENIC HOMO SNo: 864, Mutant_ID: FN960-S, Generation: M2, Mutations: 65, Genes: 9, Seed availability: Yes. FN_826-4-1.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 FN_826-4-1 Single Base Substitution C-A Homo SNo: 1495, Mutant_ID: FN_826-4-1, Generation: M3, Mutations: 39, Genes: 35, Seed availability: Yes. W674-4-1.SNP.12:27207326 chr12:027207326 0 W/27207326-27207326 W674-4-1 Single Base Substitution C-A INTERGENIC HET SNo: 1434, Mutant_ID: W674-4-1, Generation: M2, Mutations: 59, Genes: 16, Seed availability: No. FN-161.SNP.12:27216818 chr12:027216818 0 W/27216818-27216818 FN-161 Single Base Substitution G-A INTRON HET SNo: 161, Mutant_ID: FN-161, Generation: M2, Mutations: 56, Genes: 131, Seed availability: Yes. FN317-S.SNP.12:27221257 chr12:027221257 0 W/27221257-27221257 FN317-S Single Base Substitution A-T NON_SYNONYMOUS_CODING HOMO LOC_Os12g43850 retrotransposon protein, putative, unclassified, expressed SNo: 312, Mutant_ID: FN317-S, Generation: M2, Mutations: 49, Genes: 114, Seed availability: Yes. FN2780-S.SNP.12:27223872 chr12:027223872 0 W/27223872-27223872 FN2780-S SNP A -> T AC=1;AN=198;BQB=0.980121;DP=4414;DP4=2098,2100,13,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=5.86462e-16;MQSB=0.979546;RPB=0.96563;SGB=79.6954;VDB=0.639883;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAa/aTa|K1132I|1619|LOC_Os12g43850|protein_coding|CODING|LOC_Os12g43850.1|3|1) FN2780-S.SNP.12:27223969 chr12:027223969 0 W/27223969-27223969 FN2780-S SNP T -> G AC=1;AN=198;BQB=0.23579;DP=4490;DP4=2238,2015,17,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.00619e-16;MQSB=0.999497;RPB=0.884149;SGB=127.666;VDB=0.0890112;EFF=STOP_GAINED(HIGH|NONSENSE|taT/taG|Y1164*|1619|LOC_Os12g43850|protein_coding|CODING|LOC_Os12g43850.1|3|1) FN355-S.SNP.12:27242846 chr12:027242846 0 W/27242846-27242846 FN355-S Single Base Substitution T-C INTERGENIC HET SNo: 345, Mutant_ID: FN355-S, Generation: M2, Mutations: 59, Genes: 8, Seed availability: Yes. FN2266-S.SNP.12:27258365 chr12:027258365 0 W/27258365-27258365 FN2266-S SNP C -> T AC=2;AN=190;BQB=0.898995;DP=4431;DP4=1992,2120,6,16;HOB=0.020831;ICB=0.494793;MQ=49;MQ0F=0;MQB=4.71625e-13;MQSB=0.70248;RPB=0.569989;SGB=41.5369;VDB=0.392453;EFF=SYNONYMOUS_CODING(LOW|SILENT|ggC/ggT|G272|318|LOC_Os12g43910|protein_coding|CODING|LOC_Os12g43910.1|2|1) FN2612-S.SNP.12:27262463 chr12:027262463 0 W/27262463-27262463 FN2612-S SNP G -> A AC=1;AN=198;BQB=0.99948;DP=4340;DP4=2271,1781,15,15;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=2.63001e-18;MQSB=0.962544;RPB=0.816591;SGB=63.0809;VDB=0.0597852;EFF=INTERGENIC(MODIFIER||||||||||1) FN2612-S.SNP.12:27262464 chr12:027262464 0 W/27262464-27262464 FN2612-S SNP G -> T AC=1;AN=198;BQB=0.940224;DP=4336;DP4=2265,1791,15,14;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=4.74411e-19;MQSB=0.992347;RPB=0.953731;SGB=127.666;VDB=0.0622016;EFF=INTERGENIC(MODIFIER||||||||||1) FN938-S.SNP.12:27263093 chr12:027263093 0 W/27263093-27263093 FN938-S Single Base Substitution A-T INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN938-S.SNP.12:27263096 chr12:027263096 0 W/27263096-27263096 FN938-S Single Base Substitution T-A INTERGENIC HET SNo: 844, Mutant_ID: FN938-S, Generation: M2, Mutations: 51, Genes: 9, Seed availability: Yes. FN1430-S.SNP.12:27268283 chr12:027268283 0 W/27268283-27268283 FN1430-S Single Base Substitution A-G SYNONYMOUS_CODING HOMO SNo: 1203, Mutant_ID: FN1430-S, Generation: M2, Mutations: 76, Genes: 14, Seed availability: Yes. FN852-S.SNP.12:27276729 chr12:027276729 0 W/27276729-27276729 FN852-S Single Base Substitution T-C UTR_5_PRIME HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN852-S.SNP.12:27276732 chr12:027276732 0 W/27276732-27276732 FN852-S Single Base Substitution C-A UTR_5_PRIME HET SNo: 758, Mutant_ID: FN852-S, Generation: M2, Mutations: 78, Genes: 74, Seed availability: Yes. FN2472.SNP.12:27286756 chr12:027286756 0 W/27286756-27286756 FN2472 SNP G -> A AC=1;AN=200;BQB=0.987117;DP=4615;DP4=2296,2080,16,12;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=6.32422e-15;MQSB=0.980198;RPB=0.960257;SGB=90.7419;VDB=0.432757;EFF=UTR_3_PRIME(MODIFIER||27||320|LOC_Os12g43970|protein_coding|CODING|LOC_Os12g43970.1|3|1) FN2489.SNP.12:27298306 chr12:027298306 0 W/27298306-27298306 FN2489 SNP C -> T AC=1;AN=200;BQB=0.985314;DP=4498;DP4=2483,1727,17,8;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000222321;MQB=2.18619e-14;MQSB=0.931266;RPB=0.950114;SGB=50.3263;VDB=0.759476;EFF=UTR_5_PRIME(MODIFIER||107||125|LOC_Os12g44000|protein_coding|CODING|LOC_Os12g44000.3|2|1),INTRON(MODIFIER||||161|LOC_Os12g44000|protein_coding|CODING|LOC_Os12g44000.1|2|1),INTRON(MODIFIER||||135|LOC_Os12g44000|protein_coding|CODING|LOC_Os12g44000.2|2|1) FN4023-S.SNP.12:27303341 chr12:027303341 0 W/27303341-27303341 FN4023-S SNP C -> T AC=1;AN=168;BQB=0.802267;DP=2812;DP4=1299,1397,1,9;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=4.09533e-05;MQSB=0.108719;RPB=0.901595;SGB=24.4556;VDB=0.942893;EFF=INTERGENIC(MODIFIER||||||||||1) FN2479.SNP.12:27305253 chr12:027305253 0 W/27305253-27305253 FN2479 SNP T -> C AC=1;AN=200;BQB=0.999536;DP=4711;DP4=2090,2243,8,9;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000212269;MQB=1.73132e-09;MQSB=0.99664;RPB=0.904579;SGB=7.88476;VDB=0.76463;EFF=INTRON(MODIFIER||||463|LOC_Os12g44020|protein_coding|CODING|LOC_Os12g44020.1|2|1),INTRON(MODIFIER||||455|LOC_Os12g44020|protein_coding|CODING|LOC_Os12g44020.2|2|1) FN3676-S.SNP.12:27322712 chr12:027322712 0 W/27322712-27322712 FN3676-S SNP A -> G AC=1;AN=190;BQB=0.996929;DP=2841;DP4=1361,1380,6,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=9.92856e-07;MQSB=0.983589;RPB=0.0730639;SGB=32.5467;VDB=0.148495;EFF=INTERGENIC(MODIFIER||||||||||1) FN2123-S.SNP.12:27339146 chr12:027339146 0 W/27339146-27339146 FN2123-S SNP A -> G AC=1;AN=168;BQB=0.749812;DP=4221;DP4=2221,1963,15,14;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=8.99637e-14;MQSB=0.881919;RPB=0.991066;SGB=56.2162;VDB=0.347232;EFF=INTERGENIC(MODIFIER||||||||||1) FN-287.SNP.12:27342272 chr12:027342272 0 W/27342272-27342272 FN-287 Single Base Substitution A-T SYNONYMOUS_CODING HET SNo: 283, Mutant_ID: FN-287, Generation: M2, Mutations: 79, Genes: 28, Seed availability: Yes. FN533-S.SNP.12:27352360 chr12:027352360 0 W/27352360-27352360 FN533-S Single Base Substitution T-A INTERGENIC HET SNo: 530, Mutant_ID: FN533-S, Generation: M2, Mutations: 58, Genes: 31, Seed availability: Yes. FN2455.SNP.12:27354011 chr12:027354011 0 W/27354011-27354011 FN2455 SNP G -> A AC=1;AN=200;BQB=0.449406;DP=4834;DP4=2221,2271,16,15;HOB=5e-05;ICB=0.0001005;MQ=26;MQ0F=0.125983;MQB=0.648489;MQSB=3.62765e-19;RPB=0.326425;SGB=-40.8432;VDB=0.220798;EFF=INTERGENIC(MODIFIER||||||||||1) FN3717-S.SNP.12:27356315 chr12:027356315 0 W/27356315-27356315 FN3717-S SNP C -> A AC=1;AN=190;BQB=0.755452;DP=2744;DP4=1258,1384,3,7;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=1.5314e-05;MQSB=0.994019;RPB=0.985748;SGB=39.9877;VDB=0.952152;EFF=INTERGENIC(MODIFIER||||||||||1) FN498-S.SNP.12:27356434 chr12:027356434 0 W/27356434-27356434 FN498-S Single Base Substitution C-T INTERGENIC HET SNo: 496, Mutant_ID: FN498-S, Generation: M2, Mutations: 80, Genes: 19, Seed availability: Yes. FN2451.SNP.12:27358161 chr12:027358161 0 W/27358161-27358161 FN2451 SNP C -> A AC=1;AN=200;BQB=0.254837;DP=4486;DP4=2261,1928,7,5;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.47644e-06;MQSB=0.9589;RPB=0.950057;SGB=16.4591;VDB=0.190928;EFF=INTERGENIC(MODIFIER||||||||||1) FN2702-S.SNP.12:27367439 chr12:027367439 0 W/27367439-27367439 FN2702-S SNP A -> G AC=1;AN=200;BQB=0.997495;DP=4429;DP4=2324,1870,8,13;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0.000225785;MQB=4.11784e-11;MQSB=0.99966;RPB=0.956501;SGB=65.5058;VDB=0.736693;EFF=INTERGENIC(MODIFIER||||||||||1) FN-167.SNP.12:27369720 chr12:027369720 0 W/27369720-27369720 FN-167 Single Base Substitution G-A INTERGENIC HET SNo: 167, Mutant_ID: FN-167, Generation: M2, Mutations: 75, Genes: 59, Seed availability: Yes. FN1638-S.SNP.12:27372356 chr12:027372356 0 W/27372356-27372356 FN1638-S Single Base Substitution G-A SYNONYMOUS_CODING HET SNo: 1343, Mutant_ID: FN1638-S, Generation: M2, Mutations: 80, Genes: 21, Seed availability: Yes. FN1585-S.SNP.12:27383454 chr12:027383454 0 W/27383454-27383454 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1585-S.SNP.12:27383455 chr12:027383455 0 W/27383455-27383455 FN1585-S Single Base Substitution C-G INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN1585-S.SNP.12:27383456 chr12:027383456 0 W/27383456-27383456 FN1585-S Single Base Substitution C-T INTERGENIC HET SNo: 1319, Mutant_ID: FN1585-S, Generation: M2, Mutations: 106, Genes: 30, Seed availability: Yes. FN2584-S.SNP.12:27400751 chr12:027400751 0 W/27400751-27400751 FN2584-S SNP T -> G AC=2;AN=198;BQB=0.379264;DP=4348;DP4=1830,2176,38,29;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=7.07652e-37;MQSB=0.997764;RPB=0.292269;SGB=106.283;VDB=0.858814;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|aAc/aCc|N263T|859|LOC_Os12g44170|protein_coding|CODING|LOC_Os12g44170.1|3|1) FN1202-S.SNP.12:27405201 chr12:027405201 0 W/27405201-27405201 FN1202-S Single Base Substitution C-A INTERGENIC HOMO SNo: 1033, Mutant_ID: FN1202-S, Generation: M2, Mutations: 58, Genes: 7, Seed availability: Yes. FN3840-S.SNP.12:27414956 chr12:027414956 0 W/27414956-27414956 FN3840-S SNP A -> C AC=1;AN=190;BQB=0.946971;DP=2073;DP4=648,1314,5,6;HOB=5.54017e-05;ICB=0.000111386;MQ=49;MQ0F=0;MQB=0.000136536;MQSB=0.0017606;RPB=0.903684;SGB=28.9928;VDB=0.742911;EFF=INTERGENIC(MODIFIER||||||||||1) FN2462.SNP.12:27422282 chr12:027422282 0 W/27422282-27422282 FN2462 SNP C -> A AC=1;AN=200;BQB=0.974398;DP=4652;DP4=2078,2301,12,11;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.33704e-12;MQSB=0.521459;RPB=0.833736;SGB=100.316;VDB=0.408242;EFF=INTERGENIC(MODIFIER||||||||||1) FN695-S.SNP.12:27445063 chr12:027445063 0 W/27445063-27445063 FN695-S Single Base Substitution G-C INTERGENIC HET SNo: 625, Mutant_ID: FN695-S, Generation: M2, Mutations: 47, Genes: 36, Seed availability: Yes. FN-268.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN-268 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 267, Mutant_ID: FN-268, Generation: M2, Mutations: 72, Genes: 18, Seed availability: Yes. FN-296.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN-296 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 292, Mutant_ID: FN-296, Generation: M2, Mutations: 43, Genes: 74, Seed availability: Yes. FN-335.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN-335 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 327, Mutant_ID: FN-335, Generation: M2, Mutations: 74, Genes: 19, Seed availability: Yes. FN-349.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN-349 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 340, Mutant_ID: FN-349, Generation: M2, Mutations: 58, Genes: 47, Seed availability: Yes. FN1097-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN1097-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 974, Mutant_ID: FN1097-S, Generation: M2, Mutations: 128, Genes: 32, Seed availability: Yes. FN1412-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN1412-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 1189, Mutant_ID: FN1412-S, Generation: M2, Mutations: 66, Genes: 32, Seed availability: Yes. FN2081-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN2081-S SNP G -> A AC=2;AN=168;BQB=0.812907;DP=1006;DP4=407,542,3,8;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=0.000895564;MQSB=0.726648;RPB=0.832574;SGB=27.8864;VDB=0.997943;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R196C|305|LOC_Os12g44280|protein_coding|CODING|LOC_Os12g44280.1|2|1) FN2415.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN2415 SNP G -> A AC=1;AN=200;BQB=0.159371;DP=4143;DP4=1868,1970,8,10;HOB=5e-05;ICB=0.0001005;MQ=49;MQ0F=0;MQB=1.0594e-10;MQSB=0.9955;RPB=0.997661;SGB=9.48993;VDB=0.512849;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R196C|305|LOC_Os12g44280|protein_coding|CODING|LOC_Os12g44280.1|2|1) FN2588-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN2588-S SNP G -> A AC=2;AN=198;BQB=0.864579;DP=3582;DP4=1650,1633,18,12;HOB=0.019998;ICB=0.495001;MQ=49;MQ0F=0;MQB=9.81446e-18;MQSB=0.996246;RPB=0.941492;SGB=97.671;VDB=0.730004;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R196C|305|LOC_Os12g44280|protein_coding|CODING|LOC_Os12g44280.1|2|1) FN3296-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN3296-S SNP G -> A AC=1;AN=184;BQB=0.997878;DP=3528;DP4=1796,1620,6,8;HOB=5.90737e-05;ICB=0.00011879;MQ=49;MQ0F=0;MQB=5.9217e-09;MQSB=0.997346;RPB=0.818967;SGB=39.2697;VDB=0.673888;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R196C|305|LOC_Os12g44280|protein_coding|CODING|LOC_Os12g44280.1|2|1) FN4155-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN4155-S SNP G -> A AC=2;AN=170;BQB=0.903803;DP=2371;DP4=1161,1113,9,6;HOB=0.0232526;ICB=0.494188;MQ=49;MQ0F=0;MQB=2.23986e-09;MQSB=0.981146;RPB=0.784514;SGB=61.2001;VDB=0.252585;EFF=NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|Cgc/Tgc|R196C|305|LOC_Os12g44280|protein_coding|CODING|LOC_Os12g44280.1|2|1) FN431-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN431-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 430, Mutant_ID: FN431-S, Generation: M2, Mutations: 62, Genes: 60, Seed availability: Yes. FN597-S.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN597-S Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 580, Mutant_ID: FN597-S, Generation: M2, Mutations: 49, Genes: 14, Seed availability: Yes. FN_830-6-1.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 FN_830-6-1 Single Base Substitution G-A HET LOC_Os12g44280 subtilase, putative, expressed SNo: 1498, Mutant_ID: FN_830-6-1, Generation: M3, Mutations: 53, Genes: 8, Seed availability: Yes. W252-6-1.SNP.12:27446979 chr12:027446979 0 W/27446979-27446979 W252-6-1 Single Base Substitution G-A NON_SYNONYMOUS_CODING HOMO LOC_Os12g44280 subtilase, putative, expressed SNo: 1401, Mutant_ID: W252-6-1, Generation: M2, Mutations: 69, Genes: 15, Seed availability: Yes. FN2080-S.SNP.12:27449942 chr12:027449942 0 W/27449942-27449942 FN2080-S SNP A -> G AC=1;AN=168;BQB=0.943631;DP=3735;DP4=1828,1868,10,16;HOB=7.08617e-05;ICB=0.000142567;MQ=49;MQ0F=0;MQB=5.61872e-12;MQSB=0.995812;RPB=0.493854;SGB=-11.926;VDB=0.490626;EFF=INTERGENIC(MODIFIER||||||||||1) FN447-S.SNP.12:27451266 chr12:027451266 0 W/27451266-27451266 FN447-S Single Base Substitution G-T INTERGENIC HET SNo: 446, Mutant_ID: FN447-S, Generation: M2, Mutations: 75, Genes: 65, Seed availability: Yes. FN4072-S.SNP.12:27455186 chr12:027455186 0 W/27455186-27455186 FN4072-S SNP G -> T AC=1;AN=182;BQB=0.999416;DP=2454;DP4=1073,1300,6,9;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0350448;MQB=0.000224021;MQSB=0;RPB=0.886695;SGB=62.1548;VDB=0.0475066;EFF=INTERGENIC(MODIFIER||||||||||1) FN4072-S.SNP.12:27455187 chr12:027455187 0 W/27455187-27455187 FN4072-S SNP A -> T AC=1;AN=182;BQB=0.991279;DP=2446;DP4=1026,1284,7,11;HOB=6.03792e-05;ICB=0.000121422;MQ=38;MQ0F=0.0351594;MQB=0.000208337;MQSB=0;RPB=0.844433;SGB=30.6767;VDB=0.0540214;EFF=INTERGENIC(MODIFIER||||||||||1) FN1180-S.SNP.12:27462709 chr12:027462709 0 W/27462709-27462709 FN1180-S Single Base Substitution G-T SYNONYMOUS_CODING HOMO SNo: 1020, Mutant_ID: FN1180-S, Generation: M2, Mutations: 78, Genes: 49, Seed availability: Yes. FN3991-S.SNP.12:27462709 chr12:027462709 0 W/27462709-27462709 FN3991-S SNP G -> T AC=2;AN=168;BQB=0.98309;DP=2914;DP4=1358,1423,14,22;HOB=0.0235261;ICB=0.494119;MQ=49;MQ0F=0;MQB=7.45206e-18;MQSB=0.728666;RPB=0.794933;SGB=154.082;VDB=0.37621;EFF=SYNONYMOUS_CODING(LOW|SILENT|gtG/gtT|V358|822|LOC_Os12g44300|protein_coding|CODING|LOC_Os12g44300.1|1|1) FN1321-S.SNP.12:27465360 chr12:027465360 0 W/27465360-27465360 FN1321-S Single Base Substitution C-T INTRON HET SNo: 1124, Mutant_ID: FN1321-S, Generation: M2, Mutations: 59, Genes: 42, Seed availability: Yes. FN3937-S.SNP.12:27467791 chr12:027467791 0 W/27467791-27467791 FN3937-S SNP G -> A AC=1;AN=158;BQB=0.978775;DP=2556;DP4=1282,1169,4,6;HOB=8.01154e-05;ICB=0.000161245;MQ=49;MQ0F=0;MQB=1.36386e-05;MQSB=0.956342;RPB=0.0363786;SGB=23.9652;VDB=0.0919998;EFF=INTRON(MODIFIER||||547|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.1|4|1),INTRON(MODIFIER||||540|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.2|4|1) FN2546-S.SNP.12:27468556 chr12:027468556 0 W/27468556-27468556 FN2546-S SNP A -> T AC=1;AN=198;BQB=0.944355;DP=3885;DP4=1733,1942,6,12;HOB=5.10152e-05;ICB=0.000102546;MQ=49;MQ0F=0;MQB=1.47765e-11;MQSB=0.99778;RPB=0.511139;SGB=54.5295;VDB=0.285863;EFF=INTRON(MODIFIER||||540|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.2|6|1),INTRON(MODIFIER||||547|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.1|6|1) FN3435-S.SNP.12:27468640 chr12:027468640 0 W/27468640-27468640 FN3435-S SNP G -> T AC=1;AN=184;BQB=0.990732;DP=1503;DP4=497,943,1,6;HOB=5.90737e-05;ICB=0.00011879;MQ=48;MQ0F=0.000665336;MQB=0.000414135;MQSB=0.000326613;RPB=0.999993;SGB=26.1347;VDB=0.841706;EFF=INTRON(MODIFIER||||540|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.2|6|1),INTRON(MODIFIER||||547|LOC_Os12g44310|protein_coding|CODING|LOC_Os12g44310.1|6|1) FN715-S.SNP.12:27480205 chr12:027480205 0 W/27480205-27480205 FN715-S Single Base Substitution T-A UTR_3_PRIME HOMO SNo: 644, Mutant_ID: FN715-S, Generation: M2, Mutations: 62, Genes: 69, Seed availability: Yes. FN713-S.SNP.12:27487980 chr12:027487980 0 W/27487980-27487980 FN713-S Single Base Substitution C-T INTRON HET SNo: 642, Mutant_ID: FN713-S, Generation: M2, Mutations: 67, Genes: 12, Seed availability: Yes. FN555-S.SNP.12:27488177 chr12:027488177 0 W/27488177-27488177 FN555-S Single Base Substitution C-T INTRON HET SNo: 550, Mutant_ID: FN555-S, Generation: M2, Mutations: 65, Genes: 42, Seed availability: Yes. FN1274-S.SNP.12:27493344 chr12:027493344 0 W/27493344-27493344 FN1274-S Single Base Substitution C-G INTERGENIC HET SNo: 1088, Mutant_ID: FN1274-S, Generation: M2, Mutations: 47, Genes: 14, Seed availability: Yes. FN4123-S.SNP.12:27504014 chr12:027504014 0 W/27504014-27504014 FN4123-S SNP T -> C AC=2;AN=182;BQB=0.996907;DP=2845;DP4=1498,1270,21,14;HOB=0.0217365;ICB=0.494567;MQ=49;MQ0F=0;MQB=1.46389e-20;MQSB=0.997055;RPB=0.762829;SGB=152.372;VDB=0.708987;EFF=INTRON(MODIFIER||||1148|LOC_Os12g44360|protein_coding|CODING|LOC_Os12g44360.1|9|1),INTRON(MODIFIER||||1148|LOC_Os12g44360|protein_coding|CODING|LOC_Os12g44360.2|9|1),INTRON(MODIFIER||||781|LOC_Os12g44360|protein_coding|CODING|LOC_Os12g44360.3|9|1),INTRON(MODIFIER||||695|LOC_Os12g44360|protein_coding|CODING|LOC_Os12g44360.4|9|1) FN3485-S.SNP.12:27521655 chr12:027521655 0 W/27521655-27521655 FN3485-S SNP A -> G AC=2;AN=184;BQB=0.993504;DP=2176;DP4=1094,987,10,14;HOB=0.0215028;ICB=0.494625;MQ=49;MQ0F=0;MQB=1.32269e-12;MQSB=0.99915;RPB=0.484923;SGB=103.004;VDB=0.752717;EFF=INTERGENIC(MODIFIER||||||||||1) FN-149.SNP.12:27524481 chr12:027524481 0 W/27524481-27524481 FN-149 Single Base Substitution A-T INTERGENIC HOMO SNo: 149, Mutant_ID: FN-149, Generation: M2, Mutations: 54, Genes: 155, Seed availability: Yes. FN3527-S.SNP.12:27524481 chr12:027524481 0 W/27524481-27524481 FN3527-S SNP A -> T AC=1;AN=188;BQB=0.906258;DP=2428;DP4=1194,991,5,4;HOB=5.65867e-05;ICB=0.000113775;MQ=49;MQ0F=0;MQB=0.0020582;MQSB=0.694897;RPB=0.608798;SGB=8.27326;VDB=0.285163;EFF=INTERGENIC(MODIFIER||||||||||1)